##CombineVariants="analysis_type=CombineVariants input_file=[] read_buffer_size=null phone_home=STANDARD read_filter=[] intervals=null excludeIntervals=null interval_set_rule=UNION interval_merging=ALL reference_sequence=/tmp/pbs.992103.cx1b/tmp_reference.fa rodBind=[] nonDeterministicRandomSeed=false downsampling_type=BY_SAMPLE downsample_to_fraction=null downsample_to_coverage=1000 baq=OFF baqGapOpenPenalty=40.0 performanceLog=null useOriginalQualities=false defaultBaseQualities=-1 validation_strictness=SILENT unsafe=null num_threads=1 num_cpu_threads=null num_io_threads=null num_bam_file_handles=null read_group_black_list=null pedigree=[] pedigreeString=[] pedigreeValidationType=STRICT allow_intervals_with_unindexed_bam=false logging_level=INFO log_to_file=null help=false variant=[(RodBinding name=inputM source=/groupvol/pgm/home/satanur/analysis/2012_02_28/indel/28genome/28genome_raw_indel_het06_mmq30_mbq20_chrM.vcf), (RodBinding name=input1 source=/groupvol/pgm/home/satanur/analysis/2012_02_28/indel/28genome/28genome_raw_indel_het06_mmq30_mbq20_chr1.vcf), (RodBinding name=input2 source=/groupvol/pgm/home/satanur/analysis/2012_02_28/indel/28genome/28genome_raw_indel_het06_mmq30_mbq20_chr2.vcf), (RodBinding name=input3 source=/groupvol/pgm/home/satanur/analysis/2012_02_28/indel/28genome/28genome_raw_indel_het06_mmq30_mbq20_chr3.vcf), (RodBinding name=input4 source=/groupvol/pgm/home/satanur/analysis/2012_02_28/indel/28genome/28genome_raw_indel_het06_mmq30_mbq20_chr4.vcf), (RodBinding name=input5 source=/groupvol/pgm/home/satanur/analysis/2012_02_28/indel/28genome/28genome_raw_indel_het06_mmq30_mbq20_chr5.vcf), (RodBinding name=input6 source=/groupvol/pgm/home/satanur/analysis/2012_02_28/indel/28genome/28genome_raw_indel_het06_mmq30_mbq20_chr6.vcf), (RodBinding name=input7 source=/groupvol/pgm/home/satanur/analysis/2012_02_28/indel/28genome/28genome_raw_indel_het06_mmq30_mbq20_chr7.vcf), (RodBinding name=input8 source=/groupvol/pgm/home/satanur/analysis/2012_02_28/indel/28genome/28genome_raw_indel_het06_mmq30_mbq20_chr8.vcf), (RodBinding name=input9 source=/groupvol/pgm/home/satanur/analysis/2012_02_28/indel/28genome/28genome_raw_indel_het06_mmq30_mbq20_chr9.vcf), (RodBinding name=input10 source=/groupvol/pgm/home/satanur/analysis/2012_02_28/indel/28genome/28genome_raw_indel_het06_mmq30_mbq20_chr10.vcf), (RodBinding name=input11 source=/groupvol/pgm/home/satanur/analysis/2012_02_28/indel/28genome/28genome_raw_indel_het06_mmq30_mbq20_chr11.vcf), (RodBinding name=input12 source=/groupvol/pgm/home/satanur/analysis/2012_02_28/indel/28genome/28genome_raw_indel_het06_mmq30_mbq20_chr12.vcf), (RodBinding name=input13 source=/groupvol/pgm/home/satanur/analysis/2012_02_28/indel/28genome/28genome_raw_indel_het06_mmq30_mbq20_chr13.vcf), (RodBinding name=input14 source=/groupvol/pgm/home/satanur/analysis/2012_02_28/indel/28genome/28genome_raw_indel_het06_mmq30_mbq20_chr14.vcf), (RodBinding name=input15 source=/groupvol/pgm/home/satanur/analysis/2012_02_28/indel/28genome/28genome_raw_indel_het06_mmq30_mbq20_chr15.vcf), (RodBinding name=input16 source=/groupvol/pgm/home/satanur/analysis/2012_02_28/indel/28genome/28genome_raw_indel_het06_mmq30_mbq20_chr16.vcf), (RodBinding name=input17 source=/groupvol/pgm/home/satanur/analysis/2012_02_28/indel/28genome/28genome_raw_indel_het06_mmq30_mbq20_chr17.vcf), (RodBinding name=input18 source=/groupvol/pgm/home/satanur/analysis/2012_02_28/indel/28genome/28genome_raw_indel_het06_mmq30_mbq20_chr18.vcf), (RodBinding name=input19 source=/groupvol/pgm/home/satanur/analysis/2012_02_28/indel/28genome/28genome_raw_indel_het06_mmq30_mbq20_chr19.vcf), (RodBinding name=input20 source=/groupvol/pgm/home/satanur/analysis/2012_02_28/indel/28genome/28genome_raw_indel_het06_mmq30_mbq20_chr20.vcf), (RodBinding name=inputX source=/groupvol/pgm/home/satanur/analysis/2012_02_28/indel/28genome/28genome_raw_indel_het06_mmq30_mbq20_chrX.vcf), (RodBinding name=inputUn source=/groupvol/pgm/home/satanur/analysis/2012_02_28/indel/28genome/28genome_raw_indel_het06_mmq30_mbq20_chrUn.vcf), (RodBinding name=inputR source=/groupvol/pgm/home/satanur/analysis/2012_02_28/indel/28genome/28genome_raw_indel_het06_mmq30_mbq20_chr_random.vcf)] out=org.broadinstitute.sting.gatk.io.stubs.VCFWriterStub NO_HEADER=org.broadinstitute.sting.gatk.io.stubs.VCFWriterStub sites_only=org.broadinstitute.sting.gatk.io.stubs.VCFWriterStub genotypemergeoption=PRIORITIZE filteredrecordsmergetype=KEEP_IF_ANY_UNFILTERED rod_priority_list=inputM,input1,input2,input3,input4,input5,input6,input7,input8,input9,input10,input11,input12,input13,input14,input15,input16,input17,input18,input19,input20,inputX,inputUn,inputR printComplexMerges=false filteredAreUncalled=false minimalVCF=false setKey=set assumeIdenticalSamples=false minimumN=1 mergeInfoWithMaxAC=false filter_mismatching_base_and_quals=false"
##contig=<ID=chr10,length=110718848>
##contig=<ID=chr10_random,length=870782>
chr10	740	.	T	TCTCTCTCTCTCTCTCTCTCTCTC	1155.09	PASS	AB=0.820;AC=6;AF=0.107;AN=56;BaseQRankSum=-0.306;DP=525;FS=2.589;HRun=0;HaplotypeScore=218.4132;InbreedingCoeff=0.1183;MQ=40.10;MQ0=55;MQRankSum=-1.362;QD=12.56;ReadPosRankSum=1.419;VQSLOD=2.2845;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:18,1:20:24.16:370,0,24	0/0:5,0:4:6.02:0,6,381	0/0:43,0:4:2.82:0,3,79	0/0:45,0:9:13.42:0,13,77	0/0:19,0:18:39.44:0,39,1690	0/0:20,0:18:38.75:0,39,1344	0/0:12,0:10:7.43:0,7,244	0/1:20,0:12:9.51:66,0,10	1/1:6,0:5:5.19:213,5,0	0/0:28,0:28:37.12:0,37,1564	0/0:27,0:25:39.23:0,39,1267	0/0:11,0:8:17.78:0,18,592	0/0:13,0:11:19:0,19,825	0/0:10,0:10:12.71:0,13,382	0/0:20,0:16:30.80:0,31,903	0/0:21,0:21:26.06:0,26,654	0/1:14,1:16:22.42:550,0,22	0/0:20,0:16:18.40:0,18,307	0/0:18,0:15:15.72:0,16,594	0/0:23,0:21:39.33:0,39,1095	0/0:17,0:15:21.99:0,22,1133	0/0:8,0:8:16.47:0,16,822	0/0:16,0:16:33.11:0,33,1089	0/0:22,0:18:33.11:0,33,1450	0/0:8,0:7:18.06:0,18,600	0/1:13,0:20:75.78:76,0,443	0/0:12,0:17:3.01:0,3,76	0/0:4,0:2:3.01:0,3,74
chr10	1199	.	A	AAAAC	668.36	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-3.780;DP=693;FS=5.477;HRun=0;HaplotypeScore=112.0358;InbreedingCoeff=0.9212;MQ=60.99;MQ0=2;MQRankSum=-4.271;QD=27.85;ReadPosRankSum=-3.548;VQSLOD=2.1920;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:54.13:0,54,836	0/0:12,0:11:33.11:0,33,545	0/0:26,0:20:23.54:0,24,363	0/0:21,0:14:9.03:0,9,149	0/0:17,0:17:48.16:0,48,790	0/0:17,0:17:39.11:0,39,597	0/0:27,0:27:54.17:0,54,864	1/1:11,10:23:36.06:763,36,0	0/0:28,0:28:60.18:0,60,944	0/0:22,0:22:57.18:0,57,900	0/0:31,0:31:72.23:0,72,1142	0/0:42,0:42:99:0,99,1564	0/0:24,0:24:63.19:0,63,988	0/0:28,0:28:66.21:0,66,1066	0/0:32,0:32:72.22:0,72,1142	0/0:31,0:31:66.20:0,66,1024	0/0:25,0:25:60.13:0,60,930	0/0:29,0:29:28.94:0,29,791	0/0:17,0:17:36.10:0,36,567	0/0:17,0:16:39.12:0,39,617	0/0:32,0:32:60.21:0,60,991	0/0:22,0:22:54.17:0,54,844	0/0:20,0:20:45.15:0,45,716	0/0:35,0:35:90.27:0,90,1393	0/0:26,0:26:54.18:0,54,888	0/0:28,0:28:13.38:0,13,843	0/0:27,0:27:57.18:0,57,914	0/0:10,0:9:27.09:0,27,446
chr10	1241	.	A	ATG	2187.32	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-9.444;DP=697;FS=0.589;HRun=0;HaplotypeScore=78.1214;InbreedingCoeff=0.9998;MQ=79.26;MQ0=1;MQRankSum=-3.075;QD=44.64;ReadPosRankSum=1.490;VQSLOD=5.2793;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,18:21:54.19:990,54,0	0/0:12,0:12:33.11:0,33,473	0/0:24,0:24:69.18:0,69,946	0/0:16,0:16:39.09:0,39,524	0/0:27,0:27:72.22:0,72,995	0/0:18,0:18:48.16:0,48,688	0/0:18,0:18:54.18:0,54,771	0/0:39,0:38:99:0,102,1462	0/0:35,0:35:99:0,102,1443	0/0:26,0:26:69.23:0,69,989	0/0:25,0:25:75.25:0,75,1072	0/0:28,0:28:84.28:0,84,1189	0/0:21,0:21:54.18:0,54,774	0/0:28,0:28:81.26:0,81,1142	0/0:26,0:26:78.25:0,78,1100	0/0:34,0:34:99:0,102,1428	1/1:3,25:28:72.25:1319,72,0	0/0:17,0:17:48.16:0,48,679	0/0:25,0:25:69.22:0,69,971	0/0:22,0:22:63.21:0,63,903	0/0:25,0:25:72.23:0,72,1011	0/0:19,0:19:57.19:0,57,817	0/0:23,0:23:63.20:0,63,884	0/0:35,0:35:93.31:0,93,1329	0/0:23,0:23:66.22:0,66,946	0/0:28,0:28:84.27:0,84,1184	0/0:32,0:32:90.29:0,90,1272	0/0:22,0:21:63.21:0,63,903
chr10	1814	.	GCATTTTCATTC	G	2891.96	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.710;DP=491;FS=37.508;HRun=0;HaplotypeScore=156.9958;InbreedingCoeff=0.9949;MQ=71.33;MQ0=1;MQRankSum=-6.532;QD=61.53;ReadPosRankSum=-1.223;VQSLOD=1.0504;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:25:69.24:0,69,3696	0/0:9,0:9:27.08:0,27,1380	0/0:17,0:17:45.11:0,45,1999	0/0:19,0:19:44.51:0,45,1867	0/0:28,0:28:75.26:0,75,4039	0/0:14,0:14:42.14:0,42,2135	0/0:17,0:17:45.15:0,45,2121	1/1:11,20:31:60.15:1671,60,0	1/1:2,14:16:39.13:1342,39,0	0/0:25,0:25:66.20:0,66,3539	0/0:13,0:13:39.13:0,39,2000	0/0:12,0:12:33.11:0,33,1764	0/0:7,0:7:21.07:0,21,1173	0/0:21,0:21:63.20:0,63,2871	0/0:17,0:17:48.15:0,48,2244	0/0:18,0:18:51.16:0,51,2301	0/0:17,0:17:48.16:0,48,2146	0/0:14,0:13:39.13:0,39,1950	0/0:26,0:26:63.22:0,63,3131	0/0:15,0:15:45.15:0,45,2343	0/0:17,0:17:51.18:0,51,2726	0/0:11,0:11:33.10:0,33,1582	0/0:14,0:14:42.14:0,42,2349	0/0:17,0:17:42.14:0,42,2311	0/0:19,0:19:51.18:0,51,2728	0/0:22,0:22:57.18:0,57,2873	0/0:21,0:21:60.21:0,60,3237	0/0:8,0:8:21.07:0,21,1170
chr10	1884	.	TTG	T	194.43	PASS	AB=0.945;AC=18;AF=0.429;AN=42;BaseQRankSum=2.467;DP=408;FS=5.501;HRun=0;HaplotypeScore=84.7056;InbreedingCoeff=-0.1480;MQ=48.97;MQ0=15;MQRankSum=-0.906;QD=0.92;ReadPosRankSum=1.038;VQSLOD=1.2348;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:20:2.74:12,3,0	0/1:7,2:9:14.96:26,0,15	./.	./.	0/0:18,0:17:17.25:0,17,200	0/1:18,0:17:12.65:13,0,38	0/1:13,0:13:12.51:13,0,55	./.	1/1:9,0:8:2.37:8,2,0	0/0:14,0:13:9:0,9,104	0/1:13,1:14:23.94:24,0,97	0/0:10,0:8:3.01:0,3,44	./.	0/0:14,0:14:6:0,6,66	0/1:12,0:13:3.86:4,0,220	0/1:19,1:20:42.67:43,0,142	1/1:9,0:8:5.68:28,6,0	0/1:20,1:16:16.75:17,0,153	0/0:15,0:13:9.03:0,9,113	0/1:16,2:17:51.58:52,0,65	./.	0/1:15,0:15:10.57:11,0,112	./.	1/1:14,1:15:5.13:43,5,0	0/1:15,2:17:29.06:37,0,29	0/0:16,0:16:8.93:0,9,87	0/0:16,0:20:5.98:0,6,63	./.
chr10	3702	.	T	TGAA	1650.36	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=1.858;DP=686;FS=12.763;HRun=0;HaplotypeScore=107.1654;InbreedingCoeff=0.9918;MQ=87.62;MQ0=0;MQRankSum=-4.131;QD=58.94;ReadPosRankSum=-1.377;VQSLOD=4.3850;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:75.26:0,75,1245	0/0:7,0:7:21.06:0,21,325	0/0:24,0:24:69.24:0,69,1142	0/0:24,0:24:63.15:0,63,979	0/0:34,0:34:96.26:0,96,1495	0/0:13,0:13:36.12:0,36,595	0/0:20,0:20:54.17:0,54,869	0/0:38,0:38:99:0,99,1557	1/1:5,23:28:84.22:1745,84,0	0/0:33,0:33:93.31:0,93,1525	0/0:19,0:19:57.18:0,57,924	0/0:15,0:15:45.15:0,45,749	0/0:21,0:21:60.19:0,60,969	0/0:29,0:29:84.29:0,84,1398	0/0:42,0:42:99:0,117,1948	0/0:20,0:20:60.19:0,60,974	0/0:32,0:32:87.26:0,87,1395	0/0:25,0:25:69.24:0,69,1148	0/0:21,0:21:57.18:0,57,922	0/0:37,0:37:99:0,105,1692	0/0:17,0:17:48.16:0,48,799	0/0:24,0:24:66.21:0,66,1074	0/0:23,0:23:66.70:0,67,1095	0/0:17,0:17:48.16:0,48,799	0/0:23,0:23:66.18:0,66,1024	0/0:30,0:29:84.29:0,84,1379	0/0:36,0:35:96.08:0,96,1540	0/0:7,0:7:21.07:0,21,349
chr10	3750	.	T	TAGAC	12955.57	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-11.978;DP=690;FS=3.813;HRun=0;HaplotypeScore=101.5534;InbreedingCoeff=0.9984;MQ=75.76;MQ0=1;MQRankSum=-6.478;QD=64.78;ReadPosRankSum=0.091;VQSLOD=6.4706;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,24:27:63.22:1723,63,0	0/0:14,0:14:42.14:0,42,797	0/0:19,0:19:54.14:0,54,965	0/0:14,0:14:39:0,39,685	0/0:26,0:26:75.24:0,75,1420	0/0:23,0:23:69.24:0,69,1318	0/0:19,0:19:51.17:0,51,960	1/1:5,30:39:99:2684,111,0	1/1:3,22:30:66.23:1762,66,0	0/0:42,0:41:99:0,123,2325	0/0:26,0:26:75.26:0,75,1419	0/0:21,0:21:63.20:0,63,1175	0/0:27,0:27:81.28:0,81,1567	0/0:28,0:28:84.24:0,84,1525	0/0:31,0:31:84.29:0,84,1617	0/0:19,0:19:57.20:0,57,1096	1/1:1,26:27:66.23:1806,66,0	0/0:19,0:19:57.20:0,57,1091	0/0:21,0:21:60.21:0,60,1149	0/0:38,0:38:99:0,108,2059	0/0:12,0:12:33.11:0,33,616	0/0:26,0:26:78.27:0,78,1505	0/0:20,0:20:57.20:0,57,1104	0/0:16,0:16:48.16:0,48,928	0/0:29,0:29:87.30:0,87,1680	1/1:3,27:32:35.13:2255,35,0	1/1:1,32:35:83.94:2250,84,0	1/1:1,5:8:18.06:476,18,0
chr10	5651	.	A	AGAAG	1794.60	PASS	AB=1.000;AC=12;AF=0.222;AN=54;BaseQRankSum=-1.473;DP=277;FS=12.689;HRun=0;HaplotypeScore=55.4879;InbreedingCoeff=0.6584;MQ=42.68;MQ0=5;MQRankSum=-4.621;QD=23.93;ReadPosRankSum=-0.276;VQSLOD=1.5017;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,13:16:24:499,24,0	0/0:3,0:3:9.03:0,9,151	0/0:2,0:1:0:0,0,0	0/0:2,0:1:3.01:0,3,50	0/0:10,0:10:27.09:0,27,453	0/0:8,0:8:24.08:0,24,362	0/0:11,0:11:19.36:0,19,437	0/1:21,0:19:62.92:385,0,63	1/1:1,10:13:17.85:443,18,0	0/0:11,0:11:33.10:0,33,491	0/0:6,0:6:18.05:0,18,279	0/0:11,0:11:33.11:0,33,492	0/0:10,0:10:30.10:0,30,487	0/0:19,0:19:57.19:0,57,927	0/0:12,0:12:33.11:0,33,540	0/0:15,0:15:36.12:0,36,578	1/1:3,10:13:18.06:425,18,0	0/1:5,0:5:34.99:35,0,57	0/0:18,0:14:24.15:0,24,327	0/0:6,0:6:15.05:0,15,240	0/0:13,0:12:26.99:0,27,347	0/0:11,0:11:30.10:0,30,487	0/0:3,0:3:6.02:0,6,99	0/0:24,0:24:39.09:0,39,840	0/0:6,0:6:15.05:0,15,252	1/1:2,0:4:9.03:118,9,0	1/1:1,0:2:5.97:57,6,0	./.
chr10	5665	.	A	AAGGG	1714.86	PASS	AB=1.000;AC=10;AF=0.185;AN=54;BaseQRankSum=2.049;DP=367;FS=2.040;HRun=0;HaplotypeScore=72.6032;InbreedingCoeff=0.4487;MQ=48.74;MQ0=5;MQRankSum=-3.862;QD=16.81;ReadPosRankSum=-1.041;VQSLOD=2.9504;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:24:99:305,0,106	0/0:4,0:4:12.03:0,12,181	0/0:7,0:5:12:0,12,109	0/0:11,0:9:21.01:0,21,224	0/0:12,0:12:33.09:0,33,519	0/0:11,0:11:32.98:0,33,452	0/0:19,0:18:33.99:0,34,617	1/1:20,6:25:43.58:694,44,0	0/1:15,0:15:25.07:315,0,25	0/0:11,0:11:33.11:0,33,569	0/0:8,0:8:21.06:0,21,334	0/0:14,0:14:42.10:0,42,645	0/0:10,0:10:30.10:0,30,520	0/0:21,0:21:63.19:0,63,1036	0/0:16,0:16:45.03:0,45,640	0/0:20,0:20:51.05:0,51,751	0/1:16,0:16:70.86:230,0,71	0/1:9,0:9:19.04:19,0,128	0/0:20,0:16:31.81:0,32,363	0/0:7,0:7:18.05:0,18,285	0/0:20,0:19:44.93:0,45,540	0/0:12,0:12:32.93:0,33,509	0/0:3,0:3:0.98:0,1,97	0/0:32,0:32:66.58:0,67,1062	0/0:7,0:7:21.05:0,21,312	1/1:5,0:4:11.93:172,12,0	1/1:6,0:5:17.17:137,17,0	./.
chr10	6011	.	CCA	C	444.82	PASS	AB=0.893;AC=19;AF=0.380;AN=50;BaseQRankSum=5.739;DP=600;FS=7.731;HRun=0;HaplotypeScore=81.8848;InbreedingCoeff=-0.1404;MQ=66.19;MQ0=11;MQRankSum=0.242;QD=1.41;ReadPosRankSum=0.448;VQSLOD=0.8868;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:2.76:0,3,21	0/1:9,3:12:34.45:34,0,128	./.	./.	0/0:31,0:31:11.27:0,11,483	0/0:20,5:24:0.08:0,0,282	0/0:25,0:25:2.80:0,3,226	./.	0/0:21,0:20:5.67:0,6,36	0/1:17,3:19:25.51:26,0,284	0/1:13,0:13:5.61:6,0,137	0/1:15,3:18:2.76:3,0,330	0/1:13,0:13:55.23:55,0,158	0/1:18,5:23:27.37:27,0,353	0/1:25,3:27:4.02:4,0,245	0/1:19,4:24:8.85:9,0,223	0/0:24,0:27:5.90:0,6,40	0/1:18,8:25:71.46:71,0,196	0/0:11,0:11:4.81:0,5,27	0/0:19,0:19:26.70:0,27,254	0/0:17,0:16:6.79:0,7,125	0/1:25,3:26:5.85:6,0,225	0/1:11,1:12:12.12:12,0,139	0/1:27,3:30:2.77:3,0,353	0/1:12,0:12:6.79:7,0,122	1/1:9,0:20:32.18:204,32,0	1/1:12,0:28:16.33:82,16,0	1/1:3,0:8:8.52:42,9,0
chr10	6052	.	C	CACACACACAGAGAG	2057.33	PASS	AB=0.617;AC=7;AF=0.125;AN=56;BaseQRankSum=3.407;DP=676;FS=6.955;HRun=0;HaplotypeScore=227.5652;InbreedingCoeff=0.7642;MQ=59.74;MQ0=21;MQRankSum=-4.893;QD=22.12;ReadPosRankSum=-2.045;VQSLOD=1.6630;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:11,11:29:34.19:82,0,34	0/0:11,0:11:27.06:0,27,726	0/0:43,0:18:40.91:0,41,903	0/0:36,0:13:27.08:0,27,517	0/0:29,0:29:72.72:0,73,2030	0/0:28,0:27:63.19:0,63,1599	0/0:21,0:21:51.17:0,51,1354	1/1:21,0:19:42.14:858,42,0	1/1:8,1:23:3.48:195,3,0	0/0:35,0:35:87.72:0,88,1941	0/0:14,0:14:25.89:0,26,557	0/0:20,0:20:54.19:0,54,1531	0/0:16,0:16:48.16:0,48,1287	0/0:23,0:23:54.18:0,54,1702	0/0:26,0:25:57.19:0,57,1529	0/0:18,0:18:45.14:0,45,1178	1/1:19,0:19:39.60:1062,40,0	0/0:30,0:28:10.91:0,11,1601	0/0:22,0:20:45.09:0,45,897	0/0:17,0:17:42.03:0,42,990	0/0:27,0:25:64.43:0,64,1350	0/0:27,0:26:57.19:0,57,1386	0/0:19,0:19:38.14:0,38,853	0/0:33,0:33:78.22:0,78,2205	0/0:17,0:17:38.78:0,39,964	0/0:26,0:26:67.77:0,68,1495	0/0:37,0:36:74.15:0,74,1678	0/0:8,0:8:18.06:0,18,523
chr10	6226	.	A	AGTTG	4093.98	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-7.879;DP=619;FS=1.071;HRun=0;HaplotypeScore=97.6413;InbreedingCoeff=0.9970;MQ=87.21;MQ0=0;MQRankSum=-3.795;QD=66.03;ReadPosRankSum=2.293;VQSLOD=5.9751;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,117,2117	0/0:7,0:7:21.04:0,21,325	0/0:25,0:25:63.22:0,63,1157	0/0:24,0:24:55.82:0,56,874	0/0:22,0:22:57.19:0,57,1026	0/0:29,0:29:81.25:0,81,1423	0/0:27,0:27:81.24:0,81,1377	0/0:42,0:42:93.28:0,93,1592	0/0:22,0:22:57.16:0,57,985	0/0:28,0:28:69.19:0,69,1151	0/0:10,0:10:27.07:0,27,436	0/0:19,0:19:51.14:0,51,876	0/0:18,0:18:51.16:0,51,901	0/0:12,0:12:27.09:0,27,480	0/0:24,0:24:63.22:0,63,1137	0/0:18,0:18:54.15:0,54,900	0/0:17,0:17:51.16:0,51,906	0/0:21,0:21:54.16:0,54,914	0/0:22,0:22:58.38:0,58,917	0/0:26,0:26:66.21:0,66,1182	0/0:21,0:21:63.22:0,63,1159	0/0:17,0:17:48.15:0,48,851	0/0:18,0:18:48.07:0,48,883	0/0:18,0:18:51.16:0,51,892	0/0:28,0:28:84.20:0,84,1402	1/1:3,18:22:34.23:1333,34,0	1/1:3,27:32:90.17:2156,90,0	1/1:1,7:8:24.08:605,24,0
chr10	7129	.	AT	A	1116.12	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.959;DP=635;FS=0.995;HRun=13;HaplotypeScore=73.4312;InbreedingCoeff=0.8472;MQ=70.03;MQ0=0;MQRankSum=-0.688;QD=14.13;ReadPosRankSum=3.534;VQSLOD=4.3789;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,36:42:91.42:662,91,0	0/0:7,0:7:12.02:0,12,117	0/0:13,0:11:5.93:0,6,41	0/0:12,1:11:6.54:0,7,86	0/0:23,0:24:50.25:0,50,492	0/0:18,0:20:44.81:0,45,403	0/0:31,1:32:50.05:0,50,612	0/0:30,0:30:66.09:0,66,633	0/0:17,0:17:36.03:0,36,336	0/0:26,0:27:47.85:0,48,432	0/0:16,1:21:28.91:0,29,392	0/0:20,1:21:26.05:0,26,393	0/0:27,2:29:34.11:0,34,591	0/0:20,2:22:7.20:0,7,354	0/0:19,0:19:48.05:0,48,453	0/0:21,0:21:47.92:0,48,438	1/1:5,31:37:79.53:575,80,0	0/0:25,1:28:46.64:0,47,559	0/0:16,0:17:38.81:0,39,346	0/0:19,0:19:33.01:0,33,302	0/0:18,0:21:38.05:0,38,378	0/0:21,1:23:31.98:0,32,442	0/0:10,0:12:26.88:0,27,248	0/0:38,0:38:96.11:0,96,915	0/0:11,0:11:25.26:0,25,227	0/0:5,0:27:62.54:0,63,363	0/0:12,0:39:41.94:0,42,235	0/0:0,0:5:14.20:0,14,72
chr10	7531	.	TTGTC	T	1059.97	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.136;DP=753;FS=1.799;HRun=0;HaplotypeScore=123.5980;InbreedingCoeff=0.9917;MQ=77.66;MQ0=1;MQRankSum=-2.128;QD=39.26;ReadPosRankSum=0.914;VQSLOD=3.8053;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,157,3953	0/0:14,0:14:36.12:0,36,940	0/0:22,0:22:62.76:0,63,1417	0/0:18,0:18:51.15:0,51,1174	0/0:31,0:31:90.31:0,90,2333	0/0:26,0:26:78.27:0,78,2045	0/0:29,0:28:84.29:0,84,2184	0/0:33,0:33:96.33:0,96,2444	1/1:2,25:26:63.22:1155,63,0	0/0:32,0:32:84.28:0,84,2047	0/0:18,0:18:51.17:0,51,1329	0/0:25,0:25:66.23:0,66,1683	0/0:28,0:28:81.28:0,81,2138	0/0:28,0:28:78.27:0,78,1970	0/0:28,0:28:72.24:0,72,1826	0/0:27,0:27:78.25:0,78,1992	0/0:31,0:31:93.29:0,93,2345	0/0:11,0:11:33.11:0,33,841	0/0:27,0:27:81.27:0,81,2031	0/0:31,0:31:87.30:0,87,2247	0/0:43,0:43:99:0,117,3018	0/0:22,0:22:63.22:0,63,1649	0/0:28,0:28:81.28:0,81,2117	0/0:30,0:30:84.29:0,84,2156	0/0:21,0:21:60.21:0,60,1584	0/0:23,0:23:60.21:0,60,1566	0/0:40,0:40:99:0,111,2836	0/0:6,0:6:18.06:0,18,457
chr10	8285	.	CT	C	392.64	PASS	AB=0.859;AC=8;AF=0.143;AN=56;BaseQRankSum=6.040;DP=622;FS=1.926;HRun=11;HaplotypeScore=68.5317;InbreedingCoeff=0.1239;MQ=75.07;MQ0=0;MQRankSum=2.729;QD=3.14;ReadPosRankSum=-1.255;VQSLOD=-0.4978;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,2:32:34.86:0,35,754	0/1:4,2:6:31.24:31,0,110	0/1:24,3:28:14.82:15,0,224	0/1:8,2:9:30.60:31,0,67	0/0:39,0:39:96.17:0,96,977	0/0:32,0:32:75.64:0,76,787	0/0:16,0:16:42.11:0,42,448	1/1:14,21:35:24.74:417,25,0	0/0:27,0:27:72.14:0,72,739	0/0:24,3:27:25.93:0,26,595	0/0:14,1:15:10.48:0,10,301	0/0:31,1:37:42.49:0,42,713	0/0:19,3:22:7.88:0,8,469	0/0:27,0:27:72.15:0,72,746	0/0:21,1:23:25.65:0,26,513	0/0:22,0:22:45.11:0,45,473	0/0:17,0:17:48.10:0,48,503	0/0:20,0:21:50.29:0,50,570	0/0:19,0:19:39.08:0,39,403	0/1:11,1:12:8.72:9,0,113	0/1:11,2:13:22.22:22,0,197	0/0:14,0:14:27.95:0,28,290	0/0:20,0:20:40.91:0,41,418	0/0:20,0:21:51:0,51,526	0/1:18,3:21:1.21:1,0,371	0/0:20,0:20:51.10:0,51,520	0/0:31,0:36:70.63:0,71,741	0/0:9,1:10:2.40:0,2,222
chr10	8888	.	G	GGA	2375.97	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-8.846;DP=625;FS=6.803;HRun=0;HaplotypeScore=72.2628;InbreedingCoeff=0.9834;MQ=83.78;MQ0=0;MQRankSum=-1.180;QD=46.59;ReadPosRankSum=3.336;VQSLOD=5.1359;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,138,1966	0/0:5,0:5:12.04:0,12,177	0/0:25,0:25:71.41:0,71,945	0/0:15,0:15:39.11:0,39,545	0/0:25,0:25:69.23:0,69,1015	0/0:19,0:19:51.16:0,51,731	0/0:23,0:23:66.19:0,66,919	0/0:29,0:29:84.24:0,84,1162	0/0:17,0:17:51.15:0,51,729	0/0:33,0:33:93.31:0,93,1369	0/0:26,0:26:69.23:0,69,1013	0/0:18,0:18:54.16:0,54,773	0/0:23,0:23:63.21:0,63,922	0/0:26,0:26:78.22:0,78,1124	0/0:29,0:29:84.28:0,84,1237	0/0:18,0:18:51.16:0,51,731	0/0:36,0:36:99:0,105,1545	0/0:25,0:25:75.18:0,75,1055	0/0:21,0:21:60.19:0,60,855	0/0:15,0:15:45.15:0,45,662	0/0:30,0:30:87.25:0,87,1246	0/0:19,0:19:54.17:0,54,772	0/0:17,0:17:48.14:0,48,686	0/0:14,0:14:42.14:0,42,612	0/0:20,0:20:54.13:0,54,747	1/1:0,15:15:45.15:832,45,0	1/1:1,28:29:75.26:1403,75,0	1/1:0,7:7:15.05:281,15,0
chr10	9495	.	G	GAA	1744.33	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-4.544;DP=573;FS=0.000;HRun=10;HaplotypeScore=65.7504;InbreedingCoeff=0.8994;MQ=68.34;MQ0=0;MQRankSum=-0.465;QD=28.60;ReadPosRankSum=-0.299;VQSLOD=3.6018;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:78.13:0,78,793	0/0:10,0:10:27.04:0,27,267	0/0:12,0:9:8.81:0,9,96	0/0:8,0:5:5.20:0,5,23	0/0:32,0:32:73.02:0,73,813	0/0:17,0:17:42.07:0,42,427	0/0:17,0:17:45.05:0,45,450	0/0:35,0:35:84.16:0,84,854	0/0:20,0:20:57.09:0,57,565	0/0:33,0:33:75.07:0,75,757	0/0:19,0:19:39.02:0,39,397	0/0:23,0:23:55.85:0,56,603	0/0:13,0:13:30.06:0,30,305	0/0:18,0:19:47.80:0,48,540	0/0:27,0:28:74.88:0,75,807	0/0:21,0:22:53.85:0,54,601	0/0:24,0:24:54.04:0,54,549	0/0:22,0:24:56.57:0,57,603	0/0:17,0:17:39.06:0,39,397	0/0:18,0:19:41.81:0,42,408	0/0:23,0:23:57.11:0,57,580	0/0:18,0:18:41.97:0,42,479	0/0:14,0:15:38.82:0,39,378	0/0:13,0:13:36.08:0,36,366	0/0:19,0:20:47.82:0,48,470	1/1:2,21:23:60.18:871,60,0	1/1:10,23:33:63.21:919,63,0	1/1:2,3:5:6.02:89,6,0
chr10	10402	.	CTT	C	795.16	PASS	AB=0.973;AC=5;AF=0.089;AN=56;BaseQRankSum=3.868;DP=576;FS=17.908;HRun=16;HaplotypeScore=82.4142;InbreedingCoeff=0.7090;MQ=65.39;MQ0=3;MQRankSum=0.714;QD=7.87;ReadPosRankSum=4.538;VQSLOD=-0.2853;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:9,22:31:41.54:351,42,0	0/0:8,0:8:21.03:0,21,232	0/0:46,0:24:2.78:0,3,220	0/1:34,1:20:38.26:38,0,54	0/0:21,0:24:60.07:0,60,677	0/0:15,0:17:38.42:0,38,418	0/0:18,0:22:41.38:0,41,434	0/0:30,1:35:63.80:0,64,688	0/0:8,0:8:18.63:0,19,178	0/0:21,0:25:44.25:0,44,435	0/0:13,0:14:26.88:0,27,282	0/0:11,0:14:30.55:0,31,273	0/0:21,0:22:44.40:0,44,470	0/0:11,0:12:29.94:0,30,314	0/0:11,0:16:35.44:0,35,380	0/0:13,0:13:30.05:0,30,338	1/1:6,24:34:60.27:535,60,0	0/0:22,0:22:53.39:0,53,552	0/0:7,0:11:17.49:0,17,152	0/0:26,0:26:64.80:0,65,684	0/0:18,0:19:38.38:0,38,365	0/0:9,0:12:25.79:0,26,275	0/0:11,0:12:27.02:0,27,295	0/0:23,0:23:47.58:0,48,521	0/0:14,0:15:32.34:0,32,309	0/0:22,0:22:35.28:0,35,188	0/0:21,0:21:37.10:0,37,259	0/0:10,0:8:14.95:0,15,134
chr10	12439	.	A	AT	1713.28	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-10.561;DP=652;FS=1.091;HRun=8;HaplotypeScore=68.3282;InbreedingCoeff=0.9946;MQ=70.13;MQ0=0;MQRankSum=0.118;QD=28.55;ReadPosRankSum=1.718;VQSLOD=4.0844;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,33:33:90.27:1039,90,0	0/0:10,0:10:30:0,30,269	0/0:17,0:17:20.06:0,20,285	0/0:16,0:15:20.60:0,21,190	0/0:17,0:17:45.02:0,45,412	0/0:24,0:24:54:0,54,489	0/0:30,0:30:75.01:0,75,681	0/0:31,0:31:75.01:0,75,681	0/0:28,0:28:84.03:0,84,764	0/0:25,0:25:72.03:0,72,656	0/0:17,0:17:45.02:0,45,412	0/0:28,0:28:69:0,69,632	0/0:20,0:20:54.01:0,54,490	0/0:15,0:15:36.02:0,36,329	0/0:28,0:28:75.02:0,75,686	0/0:21,0:21:50.99:0,51,457	1/1:3,24:27:69.21:796,69,0	0/0:26,0:26:66.03:0,66,604	0/0:18,0:18:48:0,48,434	0/0:33,0:33:89.87:0,90,810	0/0:19,0:19:57.03:0,57,522	0/0:24,0:24:63.02:0,63,576	0/0:26,0:26:63.02:0,63,576	0/0:25,0:24:66.02:0,66,604	0/0:21,0:21:60.03:0,60,549	0/0:27,0:27:78.04:0,78,713	0/0:34,0:34:93.05:0,93,851	0/0:12,0:12:36.02:0,36,329
chr10	15924	.	C	CT	816.99	PASS	AB=0.787;AC=4;AF=0.071;AN=56;BaseQRankSum=-3.958;DP=591;FS=0.590;HRun=12;HaplotypeScore=73.3834;InbreedingCoeff=0.4159;MQ=65.78;MQ0=1;MQRankSum=0.373;QD=9.08;ReadPosRankSum=1.272;VQSLOD=2.8871;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:9,26:35:21.43:423,0,21	0/0:13,0:13:23.78:0,24,175	0/0:9,0:7:13.76:0,14,83	0/1:14,0:11:21.42:21,0,45	0/0:29,0:30:52.59:0,53,373	0/0:15,0:15:28.60:0,29,199	0/0:17,0:17:46.76:0,47,332	0/0:13,0:37:27.70:0,28,144	0/0:18,1:19:6.56:0,7,208	0/0:26,0:27:54.50:0,54,371	0/0:20,1:21:17.52:0,18,278	0/0:21,1:23:23.52:0,24,326	0/0:9,0:9:23.86:0,24,175	0/0:17,0:18:32.75:0,33,239	0/0:17,0:17:32.74:0,33,236	0/0:17,0:17:26.08:0,26,196	1/1:12,26:39:53.73:487,54,0	0/0:25,0:26:30.09:0,30,354	0/0:15,1:19:15.18:0,15,239	0/0:25,0:25:38.04:0,38,314	0/0:19,0:19:47.66:0,48,349	0/0:12,0:12:23.51:0,24,164	0/0:17,0:18:34.80:0,35,246	0/0:17,0:18:31.25:0,31,211	0/0:25,0:25:50.64:0,51,372	0/0:2,0:24:36.05:0,36,119	0/0:4,0:26:21.12:0,21,62	0/0:12,0:14:11.71:0,12,45
chr10	17182	.	G	GCA	1272.33	PASS	AB=0.788;AC=5;AF=0.089;AN=56;BaseQRankSum=8.982;DP=614;FS=9.622;HRun=0;HaplotypeScore=103.7616;InbreedingCoeff=-0.0176;MQ=70.93;MQ0=4;MQRankSum=-8.026;QD=15.15;ReadPosRankSum=-2.476;VQSLOD=2.6477;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:3.80:0,4,74	0/0:6,0:6:18.05:0,18,271	0/0:54,0:39:67.18:0,67,1362	0/0:44,0:29:49.76:0,50,591	0/0:22,0:22:57.19:0,57,910	0/0:21,0:21:57.18:0,57,905	0/0:17,0:17:48.15:0,48,758	0/1:27,3:30:99:364,0,204	0/0:20,0:20:60.20:0,60,976	0/0:24,0:24:72.24:0,72,1149	0/0:16,0:16:45.15:0,45,728	0/0:17,0:17:48.15:0,48,757	0/0:14,0:14:33.11:0,33,539	0/0:25,0:25:75.26:0,75,1215	0/0:20,0:20:60.19:0,60,948	0/0:22,0:22:66.23:0,66,1066	0/1:14,0:15:12.33:12,0,49	0/0:17,0:17:51.17:0,51,830	0/0:21,0:21:60.04:0,60,915	0/0:24,0:24:62.89:0,63,1024	0/0:43,0:43:99:0,123,1986	0/0:19,0:18:54.18:0,54,876	0/0:10,0:10:30.10:0,30,480	0/0:25,0:25:72.24:0,72,1150	0/0:19,0:19:57.18:0,57,904	0/1:10,2:11:99:186,0,100	0/1:8,14:22:24.46:656,0,24	0/1:2,3:5:5.47:170,0,5
chr10	17515	.	TTTTG	T	2269.78	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=11.060;DP=416;FS=4.891;HRun=0;HaplotypeScore=79.7769;InbreedingCoeff=0.9703;MQ=72.77;MQ0=2;MQRankSum=-4.723;QD=25.22;ReadPosRankSum=3.280;VQSLOD=2.8382;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,17:18:36.12:614,36,0	0/0:9,0:9:24.08:0,24,529	0/0:22,0:21:34.13:0,34,560	0/0:17,0:14:29.14:0,29,513	0/0:24,0:24:57.18:0,57,1231	0/0:22,0:22:48.10:0,48,1004	0/0:10,0:10:24.08:0,24,491	1/1:15,0:15:36.09:409,36,0	0/0:10,0:10:24.08:0,24,546	0/0:18,0:18:51.17:0,51,1213	0/0:15,0:15:18.06:0,18,626	0/0:10,0:10:24.08:0,24,507	0/0:11,0:11:27.08:0,27,579	0/0:5,0:5:12.04:0,12,264	0/0:16,0:16:45.15:0,45,1089	0/0:18,0:18:42.14:0,42,900	1/1:3,18:20:13.74:558,14,0	0/0:20,0:20:51.12:0,51,1105	0/0:19,0:18:48.15:0,48,931	0/0:20,0:20:57.19:0,57,1244	0/0:16,0:16:42.13:0,42,884	0/0:9,0:9:27.09:0,27,628	0/0:10,0:10:27.09:0,27,604	0/0:6,0:6:9.03:0,9,189	0/0:19,0:19:45.15:0,45,1019	1/1:15,0:15:33.09:384,33,0	1/1:12,0:11:27.08:309,27,0	1/1:9,0:9:15.03:180,15,0
chr10	17523	.	GTTT	G	1317.78	PASS	AB=0.852;AC=9;AF=0.161;AN=56;BaseQRankSum=11.028;DP=415;FS=1.629;HRun=3;HaplotypeScore=78.1562;InbreedingCoeff=0.2822;MQ=66.33;MQ0=3;MQRankSum=-4.876;QD=11.17;ReadPosRankSum=3.027;VQSLOD=0.4613;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:20,0:20:23.35:109,0,23	0/0:9,0:9:27.09:0,27,642	0/0:18,0:16:48.16:0,48,955	0/1:18,1:17:43.02:43,0,695	0/0:23,0:23:69.22:0,69,1503	0/0:17,0:17:51.17:0,51,1182	0/0:11,0:11:33.08:0,33,666	0/1:15,7:22:29.81:365,0,30	0/0:11,0:11:30.10:0,30,712	0/0:18,0:18:54.19:0,54,1316	0/0:17,0:17:43.98:0,44,986	0/0:8,0:8:24.08:0,24,586	0/0:10,0:10:30.09:0,30,673	0/0:5,0:5:15.01:0,15,306	0/0:16,0:16:48.15:0,48,1129	0/0:15,0:15:45.15:0,45,1082	0/1:19,0:18:73.28:96,0,73	0/0:19,0:19:57.14:0,57,1271	0/0:20,0:19:57.19:0,57,1245	0/0:22,0:22:66.21:0,66,1504	0/0:14,0:14:42.14:0,42,1015	0/0:9,0:9:27.09:0,27,660	0/0:13,0:13:36.12:0,36,819	0/0:5,0:5:9.03:0,9,217	0/0:17,0:17:51.16:0,51,1160	1/1:8,8:16:39.46:442,39,0	0/1:4,9:12:5.29:271,0,5	1/1:6,2:8:0.61:134,1,0
chr10	17527	.	GTTTGGT	G	1417.22	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=10.556;DP=415;FS=5.558;HRun=0;HaplotypeScore=103.5998;InbreedingCoeff=0.9490;MQ=66.14;MQ0=4;MQRankSum=-7.193;QD=25.31;ReadPosRankSum=-1.376;VQSLOD=2.8488;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:43.20:0,43,350	0/0:9,0:9:27.09:0,27,821	0/0:19,0:17:31.20:0,31,913	0/0:21,0:18:40.65:0,41,872	0/0:20,0:20:57.19:0,57,1747	0/0:17,0:17:45.15:0,45,1476	0/0:12,0:12:36.11:0,36,879	1/1:14,7:21:36.73:508,37,0	0/0:12,0:12:33.11:0,33,1014	0/0:19,0:19:57.20:0,57,1881	0/0:15,0:15:28.26:0,28,1103	0/0:8,0:8:24.08:0,24,791	0/0:9,0:9:24.08:0,24,800	0/0:6,0:6:15.05:0,15,420	0/0:15,0:15:45.15:0,45,1557	0/0:15,0:15:45.15:0,45,1374	0/0:20,0:19:22.89:0,23,304	0/0:19,0:19:57.20:0,57,1791	0/0:20,0:19:57.18:0,57,1436	0/0:21,0:21:63.22:0,63,1875	0/0:15,0:15:42.14:0,42,1346	0/0:9,0:9:27.09:0,27,848	0/0:16,0:16:45.15:0,45,1255	0/0:5,0:5:9.02:0,9,241	0/0:16,0:16:48.15:0,48,1459	1/1:7,8:15:30.07:510,30,0	1/1:4,9:12:25.77:437,26,0	1/1:5,2:7:6.50:117,7,0
chr10	17532	.	GT	G	1163.51	PASS	AB=0.745;AC=6;AF=0.107;AN=56;BaseQRankSum=8.846;DP=408;FS=2.796;HRun=3;HaplotypeScore=62.9840;InbreedingCoeff=0.5911;MQ=66.98;MQ0=3;MQRankSum=-7.468;QD=21.55;ReadPosRankSum=-0.651;VQSLOD=3.0241;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:50.97:0,51,492	0/0:9,0:9:27.09:0,27,386	0/0:19,0:16:45:0,45,580	0/0:19,0:17:47.35:0,47,590	0/0:21,0:20:63.15:0,63,833	0/0:15,0:15:42.14:0,42,605	0/0:11,0:11:30.10:0,30,432	1/1:8,10:18:26.42:522,26,0	0/0:13,0:13:36.10:0,36,498	0/0:19,0:19:57.19:0,57,821	0/0:15,0:15:34.81:0,35,499	0/0:9,0:9:24.08:0,24,344	0/0:8,0:8:24.08:0,24,344	0/0:5,0:5:12.04:0,12,173	0/0:16,0:16:48.15:0,48,673	0/0:14,0:14:39.12:0,39,545	0/0:21,0:20:29.25:0,29,410	0/0:19,0:19:57.09:0,57,773	0/0:20,0:19:54.15:0,54,721	0/0:22,0:22:63.18:0,63,868	0/0:14,0:14:42.14:0,42,604	0/0:9,0:9:27.09:0,27,388	0/0:16,0:16:42.14:0,42,600	0/0:4,0:4:6.02:0,6,86	0/0:15,0:15:45.15:0,45,648	0/1:11,6:17:39.79:397,0,40	1/1:10,3:12:29.67:310,30,0	0/1:4,2:6:56.68:71,0,57
chr10	20552	.	AT	A	1990.25	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=10.071;DP=560;FS=2.613;HRun=9;HaplotypeScore=54.6257;InbreedingCoeff=0.9650;MQ=73.70;MQ0=0;MQRankSum=-0.826;QD=22.88;ReadPosRankSum=-0.792;VQSLOD=4.2369;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:16:30.09:0,30,345	0/0:7,0:7:21.06:0,21,242	0/0:25,0:24:44.26:0,44,504	0/0:17,0:17:26.67:0,27,299	0/0:22,0:22:63.19:0,63,727	0/0:15,0:19:50.82:0,51,548	0/0:12,0:12:33.08:0,33,370	1/1:3,19:22:53.99:482,54,0	0/0:19,0:19:51.15:0,51,589	0/0:28,0:29:72.04:0,72,802	0/0:17,0:17:48:0,48,526	0/0:17,0:18:45.13:0,45,519	0/0:22,0:23:66.03:0,66,740	0/0:23,1:25:38.73:0,39,697	0/0:25,0:28:72.21:0,72,831	0/0:19,0:19:51.15:0,51,589	0/0:27,0:27:69.19:0,69,782	0/0:19,0:19:48.14:0,48,554	0/0:19,0:19:48.14:0,48,554	0/0:29,0:29:69.19:0,69,787	0/0:6,0:6:15.04:0,15,173	0/0:22,0:23:66.02:0,66,733	0/0:31,0:33:67.86:0,68,962	0/0:3,0:3:6.02:0,6,69	0/0:17,0:17:51.15:0,51,587	1/1:1,25:26:43.42:652,43,0	1/1:0,31:31:87.05:796,87,0	1/1:0,8:8:24.01:220,24,0
chr10	20998	.	CT	C	458.68	PASS	AB=0.855;AC=13;AF=0.232;AN=56;BaseQRankSum=5.031;DP=599;FS=4.872;HRun=15;HaplotypeScore=79.3882;InbreedingCoeff=0.2992;MQ=68.86;MQ0=2;MQRankSum=1.036;QD=2.34;ReadPosRankSum=2.360;VQSLOD=-0.3197;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:34:64.94:0,65,472	0/1:9,1:10:0.05:0,0,106	0/1:21,1:17:7.98:8,0,82	0/0:15,1:16:9.09:0,9,60	0/0:24,5:32:14.60:0,15,329	0/0:21,2:24:7.18:0,7,281	0/0:20,1:26:21.91:0,22,256	1/1:15,12:29:30.47:184,30,0	0/0:16,1:17:13.70:0,14,235	0/0:15,0:17:35.83:0,36,302	0/0:13,1:17:2.70:0,3,127	0/0:18,1:22:26.75:0,27,209	0/0:15,0:17:32.76:0,33,261	0/1:15,2:17:11.60:12,0,145	0/0:26,2:27:26.86:0,27,216	0/0:19,3:22:28.73:0,29,370	0/0:29,0:30:33.67:0,34,378	0/0:21,0:23:28.44:0,28,215	0/0:25,0:24:23.94:0,24,203	0/1:15,2:18:6.44:6,0,160	0/0:11,0:11:6.68:0,7,136	0/1:26,4:30:28.15:28,0,254	0/0:16,0:18:29.64:0,30,229	0/1:17,4:24:28.98:29,0,146	0/0:19,1:22:25.42:0,25,318	0/1:7,6:13:5.70:94,0,6	1/1:6,14:24:37.57:216,38,0	1/1:2,5:7:5.89:38,6,0
chr10	21383	.	CA	C	2383.92	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=9.607;DP=702;FS=2.689;HRun=5;HaplotypeScore=66.4448;InbreedingCoeff=0.9953;MQ=70.04;MQ0=1;MQRankSum=-1.406;QD=30.18;ReadPosRankSum=-0.367;VQSLOD=3.9888;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,123,1664	0/0:12,0:12:36.09:0,36,473	0/0:25,0:25:61.72:0,62,761	0/0:17,0:17:44.95:0,45,526	0/0:25,0:25:72.23:0,72,970	0/0:13,0:13:36.12:0,36,492	0/0:30,0:30:84.28:0,84,1149	1/1:1,28:29:81.22:910,81,0	0/0:19,0:19:57.18:0,57,765	0/0:34,0:34:96.31:0,96,1284	0/0:10,0:10:30.09:0,30,396	0/0:26,0:26:72.23:0,72,970	0/0:27,0:27:78.23:0,78,1022	0/0:26,0:26:75.23:0,75,998	0/0:28,0:28:78.25:0,78,1052	0/0:31,0:31:87.25:0,87,1144	0/0:41,0:41:99:0,117,1584	0/0:32,0:32:87.28:0,87,1174	0/0:31,0:30:84.27:0,84,1133	0/0:24,0:24:69.23:0,69,943	0/0:40,0:40:99:0,102,1362	0/0:18,0:18:51.17:0,51,698	0/0:27,0:27:72.23:0,72,970	0/0:32,0:32:96.32:0,96,1313	0/0:12,0:12:36.11:0,36,479	1/1:0,20:20:60.17:680,60,0	1/1:0,25:25:69.20:783,69,0	1/1:0,5:5:15.04:170,15,0
chr10	24043	.	A	AT	6028.41	PASS	AB=0.800;AC=26;AF=0.464;AN=56;BaseQRankSum=21.195;DP=941;FS=0.918;HRun=3;HaplotypeScore=145.1069;InbreedingCoeff=-0.8662;MQ=66.96;MQ0=0;MQRankSum=-20.031;QD=6.90;ReadPosRankSum=6.190;VQSLOD=1.6541;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:40,18:58:99:520,0,1057	0/1:5,4:9:99:122,0,120	0/0:35,1:35:45.99:0,46,936	0/0:31,0:27:73.77:0,74,862	0/1:28,11:39:99:230,0,866	0/1:25,7:32:99:200,0,771	0/1:29,12:41:99:370,0,776	0/1:44,5:47:77.55:78,0,1272	0/1:25,8:33:99:193,0,605	0/1:37,12:49:99:290,0,1048	0/1:14,9:23:99:308,0,435	0/1:21,13:34:99:371,0,594	0/1:30,8:38:99:227,0,899	0/1:19,8:27:99:236,0,544	0/1:29,8:37:99:188,0,903	0/1:20,8:28:99:260,0,526	0/1:14,7:21:99:239,0,342	0/1:30,8:38:99:230,0,865	0/1:23,2:25:23.78:24,0,569	0/1:28,14:42:99:392,0,788	0/1:32,9:41:99:263,0,929	0/1:23,7:30:99:209,0,670	0/1:25,9:34:99:164,0,739	0/1:30,8:38:99:233,0,833	0/1:20,6:26:99:160,0,607	0/1:26,10:36:99:317,0,761	0/1:33,7:40:99:182,0,957	0/1:5,1:6:23.84:24,0,162
chr10	24870	.	CGTGT	C	217.35	PASS	AB=0.972;AC=9;AF=0.214;AN=42;BaseQRankSum=1.479;DP=562;FS=4.275;HRun=0;HaplotypeScore=114.9363;InbreedingCoeff=0.1469;MQ=50.77;MQ0=14;MQRankSum=0.101;QD=1.13;ReadPosRankSum=0.813;VQSLOD=1.7667;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/0:8,0:8:3:0,3,25	./.	./.	0/0:7,0:6:2.99:0,3,24	0/1:15,1:16:19.34:40,0,19	0/0:17,0:15:0:0,0,0	0/0:22,0:22:3.53:0,4,8	0/1:16,0:17:10.70:11,0,149	0/0:16,0:16:8.62:0,9,37	0/0:11,0:11:3.01:0,3,60	0/0:22,0:22:11.66:0,12,85	0/0:17,0:17:8.98:0,9,217	0/0:15,0:15:8.50:0,8,68	0/0:20,0:21:12.03:0,12,166	0/0:15,1:14:3.99:0,4,16	0/1:34,0:34:14.02:18,0,14	0/0:16,0:14:6.23:0,6,80	./.	./.	0/1:59,0:59:23.06:23,0,90	0/0:15,0:15:6.01:0,6,67	./.	0/1:19,0:19:2.92:46,0,3	0/0:21,0:20:8.84:0,9,108	1/1:22,6:26:13.77:121,14,0	1/1:16,3:18:6.90:82,7,0	./.
chr10	24929	.	ATG	A	290.76	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=4.238;DP=544;FS=1.088;HRun=0;HaplotypeScore=149.6221;InbreedingCoeff=0.7094;MQ=41.94;MQ0=40;MQRankSum=-0.433;QD=4.47;ReadPosRankSum=1.403;VQSLOD=2.8079;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:20,17:34:6.32:77,6,0	0/0:2,0:2:5.98:0,6,58	0/0:25,0:3:9.03:0,9,149	0/0:15,0:5:12.04:0,12,200	0/0:9,0:8:8.52:0,9,148	0/0:19,0:18:15.02:0,15,220	0/0:21,0:17:36.12:0,36,595	0/0:22,0:13:36.01:0,36,535	0/0:14,0:14:6:0,6,100	0/0:15,0:14:33.11:0,33,525	0/0:12,0:12:17.97:0,18,299	0/0:16,0:16:22.30:0,22,320	0/0:18,0:17:33.11:0,33,544	0/0:18,0:18:20.89:0,21,292	0/0:19,0:18:27.07:0,27,449	0/0:21,0:18:20.83:0,21,312	1/1:6,21:26:27.06:325,27,0	0/0:14,0:14:25.64:0,26,402	0/0:19,0:14:27.06:0,27,406	0/0:22,0:20:29.92:0,30,499	0/0:56,0:46:67.17:0,67,1080	0/0:16,0:16:39.01:0,39,621	0/0:20,0:20:23.76:0,24,398	0/0:22,0:21:9.99:0,10,346	0/0:20,0:20:11.46:0,11,199	0/0:26,0:25:64.09:0,64,1027	0/0:13,0:12:11.39:0,11,243	0/0:5,0:3:9.03:0,9,149
chr10	25000	.	TC	T	418.60	PASS	AB=0.984;AC=21;AF=0.404;AN=52;BaseQRankSum=-7.000;DP=431;FS=76.732;HRun=2;HaplotypeScore=338.3447;InbreedingCoeff=0.1156;MQ=34.25;MQ0=1;MQRankSum=1.070;QD=1.73;ReadPosRankSum=1.358;VQSLOD=-0.3095;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:26:21.81:0,22,55	0/0:6,0:6:11.43:0,11,89	./.	./.	0/1:19,0:19:15.27:15,0,23	0/0:18,0:18:1.68:0,2,41	0/1:21,0:21:3.87:4,0,24	1/1:13,0:12:8.17:80,8,0	0/1:19,1:20:7.49:7,0,27	1/1:21,0:21:11.55:40,12,0	0/0:8,0:8:9.41:0,9,26	0/0:24,0:24:20.98:0,21,56	0/0:16,1:17:19.63:0,20,61	0/1:12,1:13:14.99:18,0,15	0/0:27,2:29:1.49:0,1,54	0/0:27,0:27:19.89:0,20,49	0/1:16,0:16:5.67:15,0,6	0/0:11,0:11:3.55:0,4,9	1/1:7,0:5:4.37:42,4,0	0/1:15,0:15:0.45:0,0,25	1/1:8,0:8:2.31:40,2,0	0/1:20,0:20:20.63:104,0,21	0/1:12,0:12:8.95:9,0,29	0/1:14,0:14:11.94:23,0,12	0/0:17,0:17:20.10:0,20,52	1/1:19,2:21:17.96:163,18,0	0/1:17,1:18:11.57:12,0,13	0/1:4,0:4:0.73:1,0,2
chr10	25077	.	CA	C	1227.24	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=6.242;DP=553;FS=0.500;HRun=9;HaplotypeScore=162.9425;InbreedingCoeff=0.7948;MQ=67.78;MQ0=0;MQRankSum=-1.988;QD=15.73;ReadPosRankSum=2.608;VQSLOD=2.2343;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:57.09:0,57,628	0/0:13,0:13:36.06:0,36,400	0/0:17,0:16:20.66:0,21,301	0/1:18,0:17:8.17:8,0,158	0/0:21,0:21:54.01:0,54,558	0/0:24,0:24:63.07:0,63,670	0/0:34,1:36:53.53:0,54,824	0/0:29,0:29:66.19:0,66,753	0/0:19,0:19:51.09:0,51,562	0/0:17,0:17:45.13:0,45,519	0/0:13,0:13:33.10:0,33,381	0/0:20,0:20:45.09:0,45,503	0/0:18,2:20:2.12:0,2,490	0/0:16,0:16:42.12:0,42,485	0/0:27,0:28:71.87:0,72,736	0/0:17,1:17:14.68:0,15,423	0/0:18,0:19:47.97:0,48,533	0/0:19,0:19:57.17:0,57,658	0/0:9,0:9:24.06:0,24,268	0/0:13,0:14:38.91:0,39,415	0/0:22,0:22:48.14:0,48,554	0/0:19,0:19:54.11:0,54,600	0/0:18,0:18:48.10:0,48,539	0/0:22,1:23:23.67:0,24,512	0/0:17,0:17:48.07:0,48,524	1/1:4,21:24:28.41:514,28,0	1/1:0,25:24:66.02:604,66,0	1/1:1,9:10:27.01:247,27,0
chr10	25568	.	A	AT	2565.55	PASS	AB=0.750;AC=13;AF=0.232;AN=56;BaseQRankSum=-9.037;DP=539;FS=10.559;HRun=12;HaplotypeScore=62.1317;InbreedingCoeff=0.8313;MQ=66.75;MQ0=0;MQRankSum=-0.727;QD=16.03;ReadPosRankSum=0.767;VQSLOD=4.2453;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,21:31:37.97:508,38,0	0/0:10,0:11:25.90:0,26,181	0/0:8,0:7:4.53:0,5,38	0/0:8,0:7:4.92:0,5,14	0/0:21,0:21:42.61:0,43,306	0/0:19,0:22:51.67:0,52,355	0/0:17,0:17:29.79:0,30,219	1/1:15,11:26:14.10:285,14,0	0/0:13,0:13:35.77:0,36,261	0/0:23,0:26:43.18:0,43,310	0/0:24,0:26:51.73:0,52,361	0/0:16,0:16:29.53:0,30,219	0/0:11,0:11:23.83:0,24,175	0/0:20,0:20:47.69:0,48,348	0/0:20,0:20:47.71:0,48,350	0/0:17,0:17:41.69:0,42,301	1/1:7,27:34:9.40:577,9,0	0/0:21,0:23:51.36:0,51,350	0/0:29,2:33:13.96:0,14,383	0/0:17,1:18:12.52:0,13,253	0/1:6,3:9:11.29:11,0,89	0/0:8,0:9:16.91:0,17,111	0/0:22,0:22:50.66:0,51,372	0/0:9,0:11:25.87:0,26,181	0/0:27,0:27:71.52:0,72,521	1/1:5,22:27:41.64:552,42,0	1/1:1,26:28:71.95:686,72,0	1/1:0,4:5:14.86:131,15,0
chr10	28425	.	AC	A	4284.75	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=9.336;DP=756;FS=7.727;HRun=1;HaplotypeScore=90.6881;InbreedingCoeff=0.9689;MQ=75.21;MQ0=0;MQRankSum=-4.925;QD=39.67;ReadPosRankSum=-2.542;VQSLOD=3.8979;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:74,0:74:99:0,211,3336	0/0:11,0:11:30.09:0,30,454	0/0:35,0:34:99:0,102,1545	0/0:26,1:26:74.38:0,74,1105	0/0:14,0:14:42.14:0,42,671	0/0:20,0:20:60.20:0,60,959	0/0:34,0:34:99:0,102,1629	1/1:0,32:32:96.32:1338,96,0	0/0:31,0:31:89.65:0,90,1374	0/0:31,0:31:93.30:0,93,1448	0/0:16,0:16:48.16:0,48,765	0/0:26,0:26:78.27:0,78,1233	0/0:32,0:32:96.33:0,96,1532	0/0:33,0:33:96.33:0,96,1525	0/0:35,0:35:99:0,105,1642	0/0:28,0:28:84.27:0,84,1318	0/0:17,0:17:51.17:0,51,815	0/0:20,0:20:57.13:0,57,883	0/0:22,0:22:63.21:0,63,1003	0/0:15,0:15:45.15:0,45,707	0/0:53,0:53:99:0,156,2442	0/0:21,0:21:63.20:0,63,983	0/0:12,0:12:36.12:0,36,575	0/0:28,0:28:84.25:0,84,1292	0/0:13,0:13:39.13:0,39,624	1/1:3,36:39:21.42:1436,21,0	1/1:3,32:35:99:1427,105,0	1/1:0,2:2:6.02:84,6,0
chr10	28476	.	C	CT	6270.32	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=0.441;DP=689;FS=6.953;HRun=0;HaplotypeScore=75.0135;InbreedingCoeff=0.9919;MQ=89.37;MQ0=0;MQRankSum=-3.931;QD=42.95;ReadPosRankSum=2.892;VQSLOD=5.4813;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,69:70:99:2916,184,0	0/0:11,0:11:33.11:0,33,460	0/0:27,0:27:78.25:0,78,1064	0/0:28,0:28:75.18:0,75,993	0/0:13,0:13:36.11:0,36,486	0/0:17,0:17:51.17:0,51,713	0/0:29,0:29:87.27:0,87,1195	0/0:38,0:38:99:0,114,1578	0/0:25,0:25:75.22:0,75,1011	0/0:24,0:24:72.21:0,72,971	0/0:12,0:12:33.02:0,33,434	0/0:24,0:24:72.24:0,72,1007	0/0:23,0:23:66.22:0,66,923	0/0:24,0:24:69.21:0,69,947	0/0:32,0:32:93.27:0,93,1277	0/0:32,0:32:93.29:0,93,1264	1/1:0,17:17:51.17:815,51,0	0/0:23,0:23:66.22:0,66,923	0/0:24,0:24:72.22:0,72,970	0/0:8,0:8:24.08:0,24,336	0/0:54,0:54:99:0,156,2159	0/0:17,0:17:48.16:0,48,671	0/0:11,0:11:33.06:0,33,398	0/0:28,0:28:84.28:0,84,1174	0/0:19,0:19:57.16:0,57,749	1/1:4,20:24:27.26:990,27,0	1/1:1,30:31:87.25:1358,87,0	1/1:0,4:4:12.04:192,12,0
chr10	28656	.	CGAGGGAGG	C	335.71	PASS	AC=4;AF=0.074;AN=54;BaseQRankSum=2.536;DP=338;FS=6.489;HRun=0;HaplotypeScore=83.8751;InbreedingCoeff=0.5363;MQ=71.34;MQ0=4;MQRankSum=-4.007;QD=7.81;ReadPosRankSum=1.229;VQSLOD=1.1000;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:16,8:24:9.03:208,9,0	0/0:2,0:2:3.01:0,3,57	0/0:18,0:8:2.99:0,3,24	0/0:18,0:12:3:0,3,28	0/0:6,0:6:5.81:0,6,89	0/0:16,0:16:27.08:0,27,931	0/0:10,0:10:15.05:0,15,439	./.	0/0:17,0:17:17.62:0,18,530	0/0:12,0:12:18.05:0,18,604	0/0:11,0:11:24.08:0,24,954	0/0:6,0:6:12.04:0,12,444	0/0:10,0:10:18.02:0,18,424	0/0:12,0:12:12.04:0,12,498	0/0:13,0:13:15.05:0,15,584	0/0:10,0:11:18.04:0,18,503	1/1:10,9:19:8.61:231,9,0	0/0:9,0:10:12:0,12,297	0/0:11,0:11:18.03:0,18,569	0/0:13,0:13:30.08:0,30,903	0/0:22,0:24:45.13:0,45,1475	0/0:11,0:11:19.88:0,20,704	0/0:12,0:12:21.04:0,21,522	0/0:3,0:3:2.99:0,3,24	0/0:5,0:5:9:0,9,225	0/0:17,0:17:23.98:0,24,507	0/0:18,0:17:21.07:0,21,703	0/0:4,0:4:4.81:0,5,29
chr10	28679	.	G	GGGAA	1412.38	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-3.846;DP=274;FS=3.976;HRun=0;HaplotypeScore=47.3111;InbreedingCoeff=0.8758;MQ=61.17;MQ0=3;MQRankSum=-0.036;QD=37.17;ReadPosRankSum=2.165;VQSLOD=2.8965;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:26.74:0,27,207	0/0:6,0:6:13.24:0,13,130	0/0:13,0:5:5.12:0,5,60	0/0:12,0:6:8.94:0,9,72	0/0:5,0:5:14.94:0,15,119	0/0:15,0:15:41.96:0,42,568	0/0:8,0:8:24.05:0,24,353	0/0:5,0:5:9.48:0,9,85	1/1:2,9:12:14.84:402,15,0	0/0:12,0:12:30.06:0,30,397	0/0:13,0:12:31.23:0,31,507	0/0:4,0:4:12.04:0,12,226	0/0:10,0:10:19.26:0,19,307	0/0:6,0:6:17.96:0,18,268	0/0:8,0:8:24.04:0,24,359	0/0:9,0:9:27.05:0,27,354	0/0:10,0:10:11.89:0,12,118	0/0:7,0:7:18:0,18,216	0/0:9,0:9:26.64:0,27,329	0/0:18,0:18:42:0,42,527	0/0:21,0:21:54.11:0,54,837	0/0:8,0:8:24.06:0,24,373	0/0:10,0:10:30.02:0,30,405	0/0:5,0:5:14.94:0,15,119	0/0:7,0:7:21.02:0,21,243	1/1:1,9:10:27.07:518,27,0	1/1:0,11:12:21.07:563,21,0	1/1:4,0:3:8.90:83,9,0
chr10	31713	.	C	CTTTAT	1513.04	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.618;DP=630;FS=5.751;HRun=0;HaplotypeScore=115.8760;InbreedingCoeff=0.9870;MQ=63.03;MQ0=0;MQRankSum=-7.340;QD=54.04;ReadPosRankSum=0.393;VQSLOD=3.9977;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,11:16:36.12:928,36,0	0/0:5,0:5:15.05:0,15,333	0/0:26,0:25:75.17:0,75,1556	0/0:14,0:13:39.13:0,39,875	0/0:25,0:25:72.23:0,72,1611	0/0:25,0:25:75.24:0,75,1659	0/0:19,0:19:57.18:0,57,1280	0/0:40,0:40:99:0,117,2573	0/0:21,0:21:60.21:0,60,1397	0/0:28,0:28:84.29:0,84,1950	0/0:17,0:17:51.16:0,51,1145	0/0:30,0:30:90.31:0,90,2055	0/0:31,0:31:93.32:0,93,2167	0/0:24,0:24:69.24:0,69,1608	0/0:34,0:34:99:0,99,2303	0/0:37,0:37:99:0,108,2472	1/1:1,11:12:26.57:706,27,0	0/0:12,0:12:36.12:0,36,839	0/0:15,0:15:39.09:0,39,815	0/0:28,0:28:84.29:0,84,1955	0/0:23,0:23:69.22:0,69,1560	0/0:15,0:15:45.15:0,45,1048	0/0:18,0:18:54.19:0,54,1258	0/0:26,0:26:78.23:0,78,1709	0/0:20,0:20:60.20:0,60,1355	0/0:27,0:27:81.28:0,81,1851	0/0:35,0:34:99:0,102,2342	0/0:7,0:7:18.06:0,18,419
chr10	31714	.	CA	C	230.30	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.600;DP=634;FS=9.304;HRun=1;HaplotypeScore=68.2842;InbreedingCoeff=0.9836;MQ=63.80;MQ0=0;MQRankSum=-7.509;QD=8.53;ReadPosRankSum=1.300;VQSLOD=0.3729;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,12:15:32.29:201,32,0	0/0:5,0:5:15.05:0,15,240	0/0:26,0:25:75.19:0,75,1099	0/0:15,0:14:42.14:0,42,652	0/0:25,0:25:72.23:0,72,1125	0/0:25,0:25:75.26:0,75,1197	0/0:20,0:20:60.19:0,60,927	0/0:42,0:42:99:0,123,1901	0/0:21,0:21:63.20:0,63,980	0/0:28,0:28:84.29:0,84,1342	0/0:17,0:17:51.17:0,51,813	0/0:30,0:30:90.28:0,90,1384	0/0:31,0:31:93.32:0,93,1487	0/0:24,0:24:72.23:0,72,1128	0/0:35,0:35:99:0,105,1630	0/0:37,0:37:99:0,111,1747	1/1:1,11:12:18.32:149,18,0	0/0:12,0:12:36.12:0,36,572	0/0:14,0:14:42.13:0,42,622	0/0:28,0:28:84.29:0,84,1339	0/0:24,0:24:72.23:0,72,1124	0/0:15,0:15:45.15:0,45,719	0/0:19,0:19:57.18:0,57,888	0/0:25,0:25:75.26:0,75,1198	0/0:21,0:21:63.20:0,63,983	0/0:27,0:27:81.27:0,81,1274	0/0:34,0:33:99:0,102,1621	0/0:7,0:7:18.06:0,18,288
chr10	32860	.	TA	T	356.29	PASS	AB=0.545;AC=1;AF=0.018;AN=56;BaseQRankSum=5.396;DP=534;FS=7.059;HRun=6;HaplotypeScore=50.4134;InbreedingCoeff=-0.0153;MQ=77.72;MQ0=0;MQRankSum=-1.045;QD=19.79;ReadPosRankSum=1.610;VQSLOD=2.7689;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:93.23:0,93,1197	0/0:13,0:13:39.08:0,39,481	0/0:12,0:12:25.96:0,26,267	0/0:21,0:17:28.43:0,28,345	0/0:20,0:20:54.15:0,54,682	0/0:23,0:23:58.19:0,58,822	0/0:23,0:24:69.08:0,69,868	0/0:26,0:26:60.19:0,60,779	0/0:7,0:7:21.06:0,21,262	0/0:20,0:20:60.18:0,60,756	0/0:20,0:20:57.18:0,57,746	0/0:15,0:15:39.11:0,39,486	0/0:18,0:18:51.17:0,51,671	0/0:16,0:16:45.12:0,45,561	0/0:17,0:17:51.16:0,51,658	0/0:24,0:24:72.21:0,72,907	0/1:3,15:18:27.73:431,0,28	0/0:25,0:25:66.19:0,66,839	0/0:18,0:18:48.08:0,48,599	0/0:25,0:25:75.22:0,75,959	0/0:27,0:27:75.23:0,75,972	0/0:10,0:10:30.08:0,30,369	0/0:8,0:8:21.07:0,21,276	0/0:35,0:35:93.23:0,93,1138	0/0:17,0:17:51.16:0,51,657	0/0:18,0:18:54.17:0,54,697	0/0:13,0:13:39.10:0,39,484	0/0:10,0:10:30.10:0,30,395
chr10	35113	.	A	AT	858.66	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=-7.396;DP=648;FS=3.144;HRun=11;HaplotypeScore=64.4068;InbreedingCoeff=0.6535;MQ=71.92;MQ0=1;MQRankSum=-0.118;QD=14.31;ReadPosRankSum=-4.675;VQSLOD=2.7142;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:77.63:0,78,600	0/0:10,0:10:23.89:0,24,183	0/1:13,0:10:7.77:8,0,27	0/0:15,0:11:8.77:0,9,57	0/0:25,0:26:64.74:0,65,489	0/0:19,0:20:46.83:0,47,354	0/0:21,0:21:56.77:0,57,439	1/1:13,34:47:99:952,99,0	0/0:24,0:25:67.78:0,68,516	0/0:21,0:21:50.78:0,51,393	0/0:17,0:17:29.65:0,30,229	0/0:21,0:21:53.76:0,54,416	0/0:22,0:23:61.73:0,62,459	0/0:19,0:19:47.81:0,48,371	0/0:23,0:23:56.71:0,57,434	0/0:27,0:27:61.82:0,62,480	0/0:24,0:24:59.75:0,60,463	0/0:28,0:28:71.66:0,72,552	0/0:26,0:26:61.72:0,62,463	0/0:22,0:22:56.77:0,57,440	0/0:32,0:32:77.66:0,78,604	0/0:27,0:27:59.74:0,60,464	0/0:14,0:14:35.84:0,36,279	0/0:19,0:19:44.78:0,45,348	0/0:18,0:18:32.81:0,33,255	0/0:30,1:32:55.26:0,55,600	0/0:29,0:29:67.71:0,68,513	0/0:17,0:17:41.83:0,42,325
chr10	38132	.	CT	C	919.04	PASS	AB=0.830;AC=16;AF=0.286;AN=56;BaseQRankSum=5.113;DP=465;FS=3.879;HRun=14;HaplotypeScore=45.1091;InbreedingCoeff=0.3955;MQ=59.42;MQ0=25;MQRankSum=0.767;QD=5.02;ReadPosRankSum=3.315;VQSLOD=1.3705;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:9,17:25:20.27:166,0,20	0/0:9,0:8:17.99:0,18,158	0/0:53,1:9:5.40:0,5,82	0/0:36,1:6:2.88:0,3,15	0/0:12,0:14:32.86:0,33,287	0/0:11,0:12:26.87:0,27,237	0/1:5,0:6:8.72:9,0,58	1/1:11,0:22:30.07:88,30,0	1/1:6,1:8:16.81:103,17,0	0/1:18,0:17:3.92:4,0,243	0/0:10,0:11:14.85:0,15,126	0/0:6,0:6:5.40:0,5,78	0/0:11,0:11:20.51:0,21,172	0/0:12,0:12:15.31:0,15,223	0/0:12,2:13:23.50:0,24,199	0/0:13,0:13:19.84:0,20,172	0/1:8,18:26:39.12:188,0,39	0/0:10,0:9:17.43:0,17,154	0/0:21,0:20:36.03:0,36,328	0/0:16,0:17:35.88:0,36,319	0/1:9,0:8:13.07:13,0,20	0/1:3,1:4:11.65:12,0,32	0/0:10,0:9:18.01:0,18,162	0/0:8,0:7:15.02:0,15,139	0/0:20,0:22:54.75:0,55,478	1/1:6,10:13:0.78:135,1,0	1/1:1,23:24:38.68:267,39,0	1/1:4,9:14:16.90:109,17,0
chr10	38817	.	CA	C	738.21	PASS	AB=0.831;AC=6;AF=0.107;AN=56;BaseQRankSum=6.313;DP=552;FS=0.000;HRun=13;HaplotypeScore=67.8698;InbreedingCoeff=0.2513;MQ=62.23;MQ0=6;MQRankSum=-0.264;QD=7.38;ReadPosRankSum=1.345;VQSLOD=2.4725;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,29:35:73.04:528,73,0	0/0:9,0:9:18.03:0,18,175	0/1:11,1:7:15.15:21,0,15	0/1:14,0:10:15.60:16,0,41	0/0:19,1:22:28.94:0,29,415	0/0:16,1:17:40.31:0,40,382	0/0:10,1:12:5.44:0,5,193	0/0:8,0:26:46.12:0,46,268	0/0:32,2:34:48.23:0,48,581	0/0:20,0:20:30.05:0,30,292	0/0:14,0:14:36.03:0,36,336	0/0:14,0:14:35.96:0,36,329	0/0:13,0:13:32.82:0,33,293	0/0:19,0:19:36.01:0,36,327	0/0:19,1:20:20.11:0,20,334	0/0:18,0:18:39.05:0,39,371	0/1:6,16:24:6.51:266,0,7	0/0:16,2:19:0.97:0,1,299	0/0:19,1:19:20.11:0,20,345	0/0:31,0:32:53.91:0,54,506	0/1:11,3:13:35.68:36,0,174	0/0:21,2:24:13.09:0,13,431	0/0:20,0:20:48.04:0,48,452	0/0:21,0:21:45.38:0,45,423	0/0:24,1:25:53.16:0,53,653	0/0:23,0:23:54.03:0,54,508	0/0:19,0:19:47.71:0,48,403	0/0:8,0:8:9.96:0,10,90
chr10	40839	.	T	TGA	5439.23	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-6.533;DP=705;FS=7.799;HRun=0;HaplotypeScore=85.0493;InbreedingCoeff=0.9997;MQ=81.59;MQ0=0;MQRankSum=-2.885;QD=45.71;ReadPosRankSum=-3.269;VQSLOD=5.0335;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,39:40:99:1804,105,0	0/0:13,0:13:39.13:0,39,528	0/0:35,0:35:78.99:0,79,1044	0/0:30,0:30:74.98:0,75,942	0/0:23,0:23:66.22:0,66,892	0/0:24,0:24:69.23:0,69,932	0/0:25,0:25:71.80:0,72,923	1/1:7,38:46:99:2008,117,0	0/0:23,0:23:63.18:0,63,818	0/0:22,0:22:63.21:0,63,853	0/0:27,0:27:72.24:0,72,973	0/0:29,0:29:81.25:0,81,1080	0/0:27,0:27:69.16:0,69,865	0/0:22,0:22:57.19:0,57,771	0/0:26,0:26:72.24:0,72,973	0/0:17,0:17:48.16:0,48,649	1/1:1,31:33:93.32:1627,93,0	0/0:21,0:21:57.19:0,57,771	0/0:17,0:17:48.12:0,48,613	0/0:29,0:29:78.26:0,78,1055	0/0:25,0:25:72.24:0,72,971	0/0:21,0:21:63.21:0,63,852	0/0:20,0:20:36.12:0,36,485	0/0:23,0:23:54.18:0,54,730	0/0:23,0:23:66.22:0,66,893	0/0:26,0:26:69.23:0,69,933	0/0:27,0:27:75.25:0,75,1010	0/0:11,0:11:30.10:0,30,406
chr10	41054	.	GACACACACACACACACACACACAC	G	748.60	PASS	AC=4;AF=0.074;AN=54;BaseQRankSum=3.985;DP=678;FS=0.000;HRun=0;HaplotypeScore=333.4469;InbreedingCoeff=0.8454;MQ=54.33;MQ0=11;MQRankSum=-2.652;QD=11.01;ReadPosRankSum=1.652;VQSLOD=1.6262;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:18,26:44:9.03:521,9,0	0/0:8,0:9:21.07:0,21,1605	0/0:21,0:9:6.02:0,6,223	./.	0/0:16,0:18:39.10:0,39,2929	0/0:27,0:29:61.09:0,61,5172	0/0:37,0:37:75.26:0,75,5818	0/0:35,0:31:42.12:0,42,1646	0/0:15,0:25:33.07:0,33,2637	0/0:28,0:31:65.58:0,66,5271	0/0:19,0:19:42.14:0,42,3452	0/0:22,0:25:60.66:0,61,4445	0/0:7,0:19:24.41:0,24,1714	0/0:19,0:19:39.12:0,39,3462	0/0:22,0:26:52.06:0,52,4991	0/0:22,0:26:54.19:0,54,4984	1/1:13,11:24:6.02:331,6,0	0/0:25,0:27:60.18:0,60,5711	0/0:21,0:23:39.07:0,39,2300	0/0:18,0:18:30.95:0,31,2341	0/0:43,0:41:69.24:0,69,5461	0/0:26,0:27:57.65:0,58,4601	0/0:17,0:17:33.01:0,33,2587	0/0:12,0:27:42.10:0,42,3545	0/0:15,0:17:36.12:0,36,2282	0/0:15,0:14:27.09:0,27,1943	0/0:8,0:15:21.06:0,21,1160	0/0:6,0:11:15.05:0,15,890
chr10	43129	.	CCA	C	248.99	PASS	AB=0.950;AC=18;AF=0.429;AN=42;BaseQRankSum=2.980;DP=468;FS=5.468;HRun=0;HaplotypeScore=62.4827;InbreedingCoeff=-0.0880;MQ=61.46;MQ0=15;MQRankSum=-0.319;QD=0.99;ReadPosRankSum=0.487;VQSLOD=0.7148;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:21,0:21:0:0,0,0	./.	./.	./.	0/0:17,0:17:15:0,15,155	0/1:18,0:18:19.63:20,0,117	0/1:18,0:17:22.51:23,0,74	./.	1/1:12,0:13:5.68:28,6,0	0/0:12,0:12:2.99:0,3,24	0/0:11,0:11:6.02:0,6,87	0/1:13,0:14:13.11:37,0,13	./.	0/1:14,1:15:19.61:20,0,99	0/0:17,0:17:9.02:0,9,112	0/1:13,0:14:2.08:2,0,119	0/1:30,0:29:26.06:26,0,37	0/1:18,3:21:24.72:25,0,74	./.	0/0:11,0:10:6:0,6,67	0/0:31,0:29:6.01:0,6,60	1/1:8,0:8:2.74:12,3,0	0/1:21,3:23:22.45:22,0,59	0/1:24,2:26:62.35:111,0,62	0/0:14,0:13:5.87:0,6,60	./.	1/1:13,0:17:8.35:42,8,0	1/1:5,0:8:2.84:14,3,0
chr10	45663	.	C	CA	636.94	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=6.705;DP=579;FS=33.408;HRun=3;HaplotypeScore=55.9106;InbreedingCoeff=0.9745;MQ=52.36;MQ0=15;MQRankSum=-7.411;QD=19.30;ReadPosRankSum=-1.745;VQSLOD=1.3938;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,11:12:21.03:267,21,0	0/0:16,0:16:45.10:0,45,523	0/0:24,0:11:11.78:0,12,196	0/0:24,1:8:24.03:0,24,262	0/0:21,0:21:45.12:0,45,528	0/0:16,0:16:39.12:0,39,467	0/0:18,0:15:42.06:0,42,485	1/1:6,8:12:27.05:344,27,0	0/0:23,0:23:51.16:0,51,611	0/0:17,0:17:48.15:0,48,576	0/0:14,0:14:33.09:0,33,384	0/0:18,0:18:48.15:0,48,574	0/0:21,0:21:54.03:0,54,630	0/0:13,0:13:39.05:0,39,449	0/0:27,0:27:66.07:0,66,755	0/0:21,0:21:62.96:0,63,689	1/1:0,7:6:12.04:165,12,0	0/0:15,0:14:36.11:0,36,432	0/0:21,0:16:45.13:0,45,530	0/0:28,0:28:81.16:0,81,934	0/0:25,0:25:68.96:0,69,778	0/0:32,0:32:78.20:0,78,910	0/0:31,0:31:78.19:0,78,918	0/0:31,0:31:81.23:0,81,958	0/0:24,0:23:63.19:0,63,756	0/0:28,0:28:84.23:0,84,992	0/0:25,0:25:74.71:0,75,820	0/0:12,0:12:33.07:0,33,371
chr10	47611	.	T	TG	126.72	PASS	AB=0.892;AC=7;AF=0.140;AN=50;BaseQRankSum=7.249;DP=599;FS=70.190;HRun=0;HaplotypeScore=39.8497;InbreedingCoeff=0.0649;MQ=23.91;MQ0=146;MQRankSum=-1.531;QD=0.83;ReadPosRankSum=2.134;VQSLOD=-0.7093;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:24,1:14:4.15:4,0,169	./.	./.	./.	0/0:22,0:10:12.04:0,12,165	0/1:23,5:21:72.89:73,0,218	0/0:18,0:7:9.03:0,9,126	0/0:54,0:7:21.07:0,21,294	0/0:22,0:14:24.08:0,24,334	0/0:33,0:20:54.16:0,54,732	0/0:17,0:8:9.03:0,9,125	0/0:14,0:11:6.02:0,6,84	0/1:14,6:15:90.16:90,0,121	0/0:20,0:14:18.06:0,18,251	0/0:16,0:10:12.04:0,12,167	0/0:15,0:9:12.04:0,12,167	0/0:30,0:8:6.02:0,6,84	0/1:23,2:10:30.26:30,0,111	0/0:24,0:9:24.08:0,24,336	0/0:26,0:9:21.01:0,21,254	0/0:21,0:5:3.01:0,3,42	0/0:14,0:6:15.05:0,15,209	0/0:14,0:10:18.06:0,18,249	1/1:12,2:6:5.93:40,6,0	0/0:19,0:11:24.08:0,24,335	0/0:30,2:23:13.02:0,13,747	0/1:39,2:27:7.21:7,0,394	0/0:24,0:12:15.05:0,15,207
chr10	48188	.	AT	A	938.59	PASS	AC=6;AF=0.115;AN=52;BaseQRankSum=6.726;DP=573;FS=6.491;HRun=8;HaplotypeScore=42.3624;InbreedingCoeff=0.8954;MQ=43.83;MQ0=44;MQRankSum=-3.025;QD=13.80;ReadPosRankSum=-0.788;VQSLOD=2.4716;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:17:24.07:0,24,290	0/0:5,0:6:5.91:0,6,52	./.	./.	0/0:37,0:34:57.15:0,57,664	0/0:26,1:23:41.94:0,42,507	0/0:12,0:10:6.02:0,6,72	0/0:32,0:10:30.09:0,30,362	0/0:25,0:20:30.08:0,30,353	0/0:27,0:22:60.16:0,60,703	0/0:21,0:20:30.09:0,30,362	0/0:19,0:18:39.11:0,39,461	0/0:17,0:15:30.09:0,30,362	0/0:10,0:10:17.99:0,18,196	0/0:19,0:18:27.08:0,27,326	0/0:21,0:21:30.09:0,30,362	0/0:29,1:21:27.08:0,27,326	0/0:14,0:13:18.06:0,18,217	0/0:21,0:12:27.08:0,27,326	0/0:37,0:36:78.24:0,78,942	0/0:11,0:10:9.03:0,9,109	0/0:23,0:23:36.11:0,36,435	0/0:22,0:22:39.02:0,39,471	0/0:19,0:17:33.10:0,33,399	0/0:26,0:25:45.13:0,45,534	1/1:4,21:22:23.85:514,24,0	1/1:6,23:25:45:417,45,0	1/1:6,8:12:15.02:145,15,0
chr10	52141	.	A	AT	1486	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-9.320;DP=728;FS=3.896;HRun=1;HaplotypeScore=68.6177;InbreedingCoeff=0.9918;MQ=88.39;MQ0=0;MQRankSum=-2.308;QD=36.24;ReadPosRankSum=-5.274;VQSLOD=1.7591;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:78.25:0,78,1012	0/0:6,0:6:18.06:0,18,233	0/0:27,0:27:64.70:0,65,904	0/0:28,0:28:78.22:0,78,973	0/0:45,0:45:99:0,126,1625	0/0:32,0:31:93.29:0,93,1194	0/0:19,0:19:54.18:0,54,701	1/1:4,37:41:99:1581,111,0	0/0:26,0:26:75.23:0,75,958	0/0:32,0:32:90.24:0,90,1096	0/0:25,0:25:75.22:0,75,946	0/0:17,0:17:51.15:0,51,636	0/0:16,0:16:42.12:0,42,529	0/0:20,0:20:60.20:0,60,778	0/0:21,0:21:63.20:0,63,817	0/0:21,0:21:63.18:0,63,771	0/0:22,0:22:54.10:0,54,654	0/0:13,0:13:36.10:0,36,451	0/0:17,0:17:51.15:0,51,637	0/0:33,0:33:99:0,99,1243	0/0:43,0:43:99:0,120,1490	0/0:30,0:30:75.22:0,75,936	0/0:27,0:27:75.24:0,75,973	0/0:18,0:18:54.13:0,54,656	0/0:30,0:30:90.25:0,90,1117	0/0:39,0:39:99:0,117,1456	0/0:42,0:42:99:0,123,1594	0/0:12,0:12:36.12:0,36,467
chr10	52749	.	G	GA	808.56	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-8.001;DP=664;FS=5.000;HRun=7;HaplotypeScore=64.5073;InbreedingCoeff=0.9989;MQ=77.66;MQ0=0;MQRankSum=-1.344;QD=27.88;ReadPosRankSum=-4.242;VQSLOD=2.5734;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:87.14:0,87,840	0/0:12,0:12:30.05:0,30,290	0/0:18,0:18:38.89:0,39,358	0/0:24,0:24:56.85:0,57,504	0/0:28,0:28:78.07:0,78,734	0/0:32,0:32:84.10:0,84,801	0/0:21,0:21:57.09:0,57,550	1/1:4,25:29:75.70:903,76,0	0/0:24,0:24:66.08:0,66,626	0/0:27,0:27:81.11:0,81,776	0/0:29,0:29:78.12:0,78,753	0/0:22,0:22:57.09:0,57,550	0/0:13,0:13:36.05:0,36,343	0/0:21,0:21:60.10:0,60,579	0/0:30,0:30:87.14:0,87,840	0/0:20,0:20:54.06:0,54,511	0/0:27,0:27:72.04:0,72,678	0/0:11,0:12:32.79:0,33,301	0/0:24,0:24:69.10:0,69,662	0/0:28,0:28:75.11:0,75,724	0/0:28,0:28:75:0,75,696	0/0:15,0:15:39.06:0,39,377	0/0:27,0:27:69.10:0,69,662	0/0:22,0:22:63.10:0,63,608	0/0:24,0:24:66.10:0,66,637	0/0:26,0:26:72.10:0,72,692	0/0:35,0:35:99:0,102,984	0/0:16,0:16:48.08:0,48,463
chr10	53519	.	TGCTCTTTCAGAAG	T	794.74	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.610;DP=458;FS=8.268;HRun=0;HaplotypeScore=163.7158;InbreedingCoeff=0.9523;MQ=74.41;MQ0=0;MQRankSum=-2.715;QD=61.13;ReadPosRankSum=-2.387;VQSLOD=2.4182;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:63.17:0,63,3686	0/0:10,0:10:30.09:0,30,1800	0/0:16,0:16:38.32:0,38,1400	0/0:15,0:14:38.97:0,39,1251	0/0:22,0:22:66.23:0,66,4179	0/0:16,0:16:48.16:0,48,2945	0/0:17,0:17:51.18:0,51,3158	1/1:0,13:12:35.96:889,36,0	0/0:28,0:28:84.21:0,84,4747	0/0:15,0:15:45.15:0,45,2840	0/0:11,0:11:33.11:0,33,2094	0/0:12,0:12:33.11:0,33,2182	0/0:13,0:13:39.13:0,39,2551	0/0:16,0:16:48.16:0,48,2922	0/0:16,0:16:45.14:0,45,2878	0/0:15,0:15:42.14:0,42,2721	0/0:25,0:25:75.24:0,75,4609	0/0:8,0:8:24.08:0,24,1573	0/0:13,0:13:39.13:0,39,2567	0/0:17,0:17:51.16:0,51,3112	0/0:19,0:19:57.20:0,57,3634	0/0:4,0:4:12.03:0,12,637	0/0:5,0:5:15.03:0,15,698	0/0:19,0:19:57.20:0,57,3786	0/0:18,0:18:54.17:0,54,3127	0/0:26,0:26:75.26:0,75,4649	0/0:22,0:22:63.22:0,63,4166	0/0:23,0:23:69.24:0,69,4644
chr10	53652	.	AAC	A	990.29	PASS	AB=0.984;AC=23;AF=0.442;AN=52;BaseQRankSum=4.221;DP=485;FS=4.984;HRun=0;HaplotypeScore=76.8758;InbreedingCoeff=0.3029;MQ=57.63;MQ0=17;MQRankSum=2.067;QD=4.11;ReadPosRankSum=-0.778;VQSLOD=1.9786;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:21.41:0,21,221	0/1:7,0:8:14.08:14,0,147	./.	./.	1/1:12,12:24:29.46:212,29,0	0/1:20,0:20:11.23:11,0,385	0/1:14,0:14:11.42:11,0,155	0/0:26,0:22:2.34:0,2,14	1/1:10,10:20:5.89:66,6,0	0/0:11,0:10:3.97:0,4,72	0/1:18,0:18:12.28:12,0,277	0/0:16,0:16:2.53:0,3,145	0/0:9,1:9:10.36:0,10,99	0/0:12,0:12:18.03:0,18,216	0/1:14,0:14:35.45:35,0,162	0/0:7,0:7:9.10:0,9,103	0/0:21,0:21:2.03:0,2,6	0/0:15,0:15:24.43:0,24,287	1/1:8,7:15:11.96:122,12,0	1/1:4,5:9:14.07:87,14,0	1/1:14,0:14:8.84:71,9,0	0/0:9,0:8:12.03:0,12,158	0/1:14,0:14:42.10:42,0,150	0/0:24,0:23:14.17:0,14,242	0/1:26,0:26:76.61:77,0,325	1/1:9,10:18:20.31:213,20,0	1/1:9,8:17:12.08:92,12,0	1/1:2,5:7:9.02:100,9,0
chr10	55618	.	AAC	A	324.29	PASS	AB=0.924;AC=15;AF=0.313;AN=48;BaseQRankSum=4.486;DP=455;FS=9.796;HRun=0;HaplotypeScore=75.5966;InbreedingCoeff=0.1658;MQ=39.62;MQ0=32;MQRankSum=-2.480;QD=1.67;ReadPosRankSum=1.139;VQSLOD=0.7567;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:19,0:16:0:0,0,0	./.	./.	./.	0/0:12,0:8:6.02:0,6,80	0/0:10,0:10:3.01:0,3,45	0/1:32,2:31:9.08:9,0,274	./.	1/1:11,6:16:18.05:199,18,0	0/1:18,2:17:32.27:32,0,135	0/0:11,0:10:0:0,0,0	0/1:19,2:17:21.16:21,0,79	0/0:17,0:16:21.05:0,21,267	0/1:17,1:16:24.17:24,0,52	0/0:23,0:23:21.07:0,21,305	0/0:8,0:8:12.04:0,12,180	1/1:17,0:11:3:26,3,0	0/0:27,0:26:21.01:0,21,266	0/0:14,0:12:7.36:0,7,72	0/0:11,0:11:3.01:0,3,38	0/0:28,0:23:7.23:0,7,70	0/1:13,1:14:24.12:24,0,81	0/0:11,0:10:3.01:0,3,45	0/0:41,0:36:27.09:0,27,406	0/1:9,1:10:9.78:10,0,81	0/0:13,0:9:3.01:0,3,45	1/1:6,2:7:6.01:66,6,0	1/1:6,1:6:5.98:54,6,0
chr10	55702	.	AG	A	946.23	PASS	AB=0.922;AC=13;AF=0.232;AN=56;BaseQRankSum=3.869;DP=463;FS=12.665;HRun=10;HaplotypeScore=66.9357;InbreedingCoeff=0.4781;MQ=61.87;MQ0=8;MQRankSum=0.977;QD=8.09;ReadPosRankSum=2.060;VQSLOD=0.7377;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:18:4.07:0,4,17	0/0:9,0:8:8.99:0,9,87	0/0:46,1:23:49.26:0,49,468	0/0:45,0:21:33.95:0,34,349	0/1:15,1:15:2.09:2,0,172	0/1:12,2:12:5.02:5,0,162	0/0:20,2:22:4.96:0,5,474	0/0:8,0:4:4.30:0,4,17	1/1:3,9:12:26.91:234,27,0	0/0:13,0:13:24.06:0,24,265	0/0:5,0:5:12.03:0,12,130	0/0:14,0:14:30.03:0,30,310	0/0:13,0:13:24.03:0,24,242	0/0:9,0:9:18.03:0,18,183	0/0:13,0:13:18.02:0,18,177	0/0:6,0:6:15.03:0,15,158	0/1:15,0:10:6.29:6,0,8	0/0:15,0:15:17.02:0,17,326	0/1:6,1:6:14.03:14,0,87	0/0:12,1:13:20.83:0,21,194	0/0:32,1:32:31.17:0,31,571	0/0:20,0:20:51.08:0,51,532	0/1:10,1:11:5.01:5,0,170	0/0:25,2:26:0.85:0,1,226	0/0:10,0:10:14.39:0,14,133	1/1:2,19:21:42.85:451,43,0	1/1:1,9:10:24:208,24,0	1/1:3,8:11:22.23:185,22,0
chr10	55703	.	G	GAGA	500.31	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=3.943;DP=457;FS=16.264;HRun=0;HaplotypeScore=93.6554;InbreedingCoeff=0.5850;MQ=62.31;MQ0=8;MQRankSum=-1.887;QD=5.50;ReadPosRankSum=-2.613;VQSLOD=0.7190;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:12,9:18:13.29:236,13,0	0/0:7,0:6:9:0,9,127	0/0:48,0:23:45.31:0,45,781	0/0:45,0:21:46.89:0,47,696	0/0:16,0:15:32.73:0,33,348	0/0:13,0:12:24.04:0,24,302	0/0:22,0:22:63.05:0,63,950	1/1:2,4:4:11.97:141,12,0	0/1:13,0:13:21.91:22,0,189	0/0:11,0:11:27.09:0,27,472	0/0:5,0:5:12.04:0,12,222	0/0:16,0:16:33.05:0,33,476	0/0:14,0:14:30.06:0,30,440	0/0:9,0:9:18.03:0,18,274	0/0:13,0:13:21.04:0,21,292	0/0:7,0:7:18.05:0,18,297	1/1:10,4:10:14.52:191,15,0	0/0:14,0:14:20.05:0,20,576	0/0:6,0:5:12.03:0,12,169	0/0:13,0:13:24.45:0,24,303	0/0:30,0:29:56.81:0,57,1177	0/0:20,0:20:50.69:0,51,755	0/0:11,0:11:21.12:0,21,374	0/0:25,0:24:32.94:0,33,510	0/0:9,0:10:12.53:0,13,236	0/1:22,0:22:1.40:1,0,365	0/0:11,0:11:18.18:0,18,160	0/1:11,0:11:55.47:55,0,148
chr10	57054	.	C	CGTGT	1901.91	PASS	AB=0.800;AC=10;AF=0.185;AN=54;BaseQRankSum=0.847;DP=656;FS=27.763;HRun=0;HaplotypeScore=125.5030;InbreedingCoeff=0.6514;MQ=65.84;MQ0=4;MQRankSum=-2.258;QD=14.19;ReadPosRankSum=-2.774;VQSLOD=1.2892;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:3.80:0,4,26	0/0:9,0:9:9:0,9,111	./.	0/0:38,0:26:8.97:0,9,105	0/0:24,0:27:41.54:0,42,747	0/0:15,0:19:28.81:0,29,374	0/0:16,0:18:24.07:0,24,365	1/1:27,0:27:16.09:137,16,0	1/1:16,8:25:26.76:543,27,0	0/0:27,0:28:34.53:0,35,614	0/0:11,0:13:20.99:0,21,254	0/0:16,0:16:30.98:0,31,458	0/0:16,0:18:39.12:0,39,581	0/0:16,0:17:33.11:0,33,508	0/0:18,0:18:30.09:0,30,458	0/0:16,0:17:28.67:0,29,467	1/1:15,10:25:8.99:143,9,0	0/0:16,0:16:26.84:0,27,387	0/0:20,0:21:11.93:0,12,161	0/0:14,0:16:30.08:0,30,418	0/0:49,0:51:64.68:0,65,864	0/0:18,0:26:4.61:0,5,280	0/0:23,0:23:44.29:0,44,593	0/0:46,0:50:87.24:0,87,1312	0/0:15,0:19:38.92:0,39,506	0/1:27,0:27:60.82:442,0,61	1/1:6,10:18:29.84:662,30,0	0/1:4,8:12:39.13:135,0,39
chr10	57082	.	TGC	T	559.13	PASS	AB=0.980;AC=7;AF=0.125;AN=56;BaseQRankSum=9.835;DP=609;FS=13.538;HRun=0;HaplotypeScore=91.4984;InbreedingCoeff=0.0894;MQ=56.12;MQ0=5;MQRankSum=-0.527;QD=3.86;ReadPosRankSum=-1.205;VQSLOD=0.8530;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:37,2:39:2.62:457,3,0	0/0:6,0:6:12.01:0,12,158	0/1:20,0:12:17.77:18,0,129	0/1:24,0:10:27.37:27,0,107	0/0:27,0:27:46.40:0,46,868	0/1:17,0:17:11.46:11,0,273	0/0:18,0:18:38.02:0,38,458	0/1:21,0:21:62.38:104,0,62	0/0:18,0:18:42:0,42,464	0/0:28,0:28:59.97:0,60,640	0/0:19,0:19:24.21:0,24,411	0/0:17,0:17:47.87:0,48,583	0/0:20,0:20:30.30:0,30,505	0/0:17,0:17:42.11:0,42,528	0/0:14,0:14:32.99:0,33,448	0/0:16,0:16:12.94:0,13,521	0/1:21,0:20:10.49:66,0,10	0/0:15,0:15:23.52:0,24,477	0/0:15,0:15:33.44:0,33,366	0/0:16,0:16:11.59:0,12,423	0/0:41,0:41:37.91:0,38,910	0/0:25,0:24:24.25:0,24,515	0/0:24,0:24:4.90:0,5,498	0/0:51,0:50:99:0,110,1525	0/0:23,0:23:27.26:0,27,404	0/0:22,2:24:37.64:0,38,458	0/0:19,0:19:34.34:0,34,424	0/0:11,0:11:14.97:0,15,142
chr10	58265	.	CTTT	C	272.14	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=0.717;DP=384;FS=11.726;HRun=16;HaplotypeScore=51.0611;InbreedingCoeff=0.4161;MQ=58.15;MQ0=42;MQRankSum=-3.049;QD=12.96;ReadPosRankSum=-2.116;VQSLOD=-0.2642;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:11.71:0,12,68	0/0:2,0:2:2.98:0,3,21	0/0:38,0:8:17.11:0,17,177	0/0:32,0:12:5.59:0,6,27	0/0:13,0:13:29.89:0,30,374	0/0:11,0:12:27.01:0,27,404	0/0:7,0:6:2.97:0,3,20	1/1:6,14:20:37.23:366,37,0	0/0:6,0:5:6.02:0,6,94	0/0:9,0:8:17.99:0,18,259	0/0:11,0:12:12.04:0,12,214	0/0:9,0:7:3.01:0,3,54	0/0:9,0:8:9.03:0,9,161	0/0:10,0:9:17.95:0,18,222	0/0:10,0:10:14.82:0,15,167	0/0:11,0:8:15:0,15,234	0/0:12,0:7:5.45:0,5,25	0/0:14,0:14:21.04:0,21,301	0/0:14,0:9:21.03:0,21,281	0/0:18,0:18:29.81:0,30,294	0/0:16,0:16:35.86:0,36,388	0/0:6,0:4:5.97:0,6,72	0/0:9,0:9:17.94:0,18,206	0/0:14,0:10:18.52:0,19,295	0/0:5,0:5:8.24:0,8,114	0/0:13,0:16:35.99:0,36,492	0/0:15,0:15:38.94:0,39,546	0/0:18,0:15:36.07:0,36,569
chr10	73033	.	TTAAC	T	656.11	PASS	AB=0.981;AC=8;AF=0.148;AN=54;BaseQRankSum=6.283;DP=584;FS=0.000;HRun=0;HaplotypeScore=91.1302;InbreedingCoeff=0.6113;MQ=67.41;MQ0=3;MQRankSum=2.216;QD=6.91;ReadPosRankSum=0.713;VQSLOD=2.1668;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:10,10:20:15.05:223,15,0	0/0:8,0:8:12.04:0,12,267	0/0:25,0:24:1.25:0,1,3	./.	0/0:19,0:19:21.07:0,21,487	0/0:22,0:22:18.06:0,18,412	0/0:23,0:23:36.12:0,36,831	0/0:14,0:13:3:0,3,27	1/1:8,13:21:30.10:461,30,0	0/0:30,0:29:51.15:0,51,1130	0/1:15,0:15:23.37:23,0,316	0/0:19,0:19:36.12:0,36,842	0/0:22,0:22:27.09:0,27,631	0/0:16,0:16:27.05:0,27,538	0/0:31,0:31:66.23:0,66,1506	0/0:24,0:24:54.18:0,54,1206	1/1:13,0:13:9.01:84,9,0	0/1:25,1:26:6.99:7,0,778	0/0:24,0:24:27.09:0,27,632	0/0:26,0:26:42.14:0,42,947	0/0:30,0:30:42.09:0,42,842	0/0:17,0:17:24.08:0,24,530	0/0:13,0:13:9.03:0,9,210	0/0:17,0:17:24.08:0,24,560	0/0:33,0:33:60.21:0,60,1352	0/0:30,0:30:66.23:0,66,1503	0/0:21,0:21:45.15:0,45,990	0/0:8,0:8:9.03:0,9,198
chr10	73034	.	TAACTAAC	T	167.80	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.716;DP=580;FS=2.539;HRun=0;HaplotypeScore=127.9657;InbreedingCoeff=0.9349;MQ=67.51;MQ0=3;MQRankSum=-2.893;QD=12.91;ReadPosRankSum=-0.542;VQSLOD=2.9126;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:48.13:0,48,640	0/0:8,0:8:24.08:0,24,650	0/0:25,0:24:72.11:0,72,857	0/0:17,0:15:45.14:0,45,614	0/0:18,0:18:51.17:0,51,1250	0/0:22,0:22:66.20:0,66,1335	0/0:24,0:24:72.24:0,72,2061	0/0:14,0:13:39.12:0,39,546	0/0:21,0:21:54.11:0,54,612	0/0:30,0:29:87.29:0,87,2698	0/0:15,0:15:42.14:0,42,983	0/0:19,0:19:57.19:0,57,1771	0/0:22,0:22:66.22:0,66,1650	0/0:16,0:16:48.16:0,48,1335	0/0:31,0:31:93.31:0,93,3061	0/0:24,0:24:72.16:0,72,2418	1/1:0,13:13:9.03:251,9,0	0/0:25,0:25:75.24:0,75,1970	0/0:24,0:24:69.19:0,69,1619	0/0:27,0:27:81.25:0,81,2279	0/0:28,0:28:81.25:0,81,2168	0/0:17,0:17:51.14:0,51,1372	0/0:13,0:13:39.13:0,39,748	0/0:16,0:16:48.16:0,48,1301	0/0:31,0:31:93.31:0,93,2900	0/0:31,0:31:93.31:0,93,3134	0/0:21,0:21:63.21:0,63,2150	0/0:8,0:8:24.08:0,24,562
chr10	73765	.	AGTGT	A	407.97	PASS	AB=0.907;AC=6;AF=0.107;AN=56;BaseQRankSum=5.417;DP=623;FS=1.015;HRun=0;HaplotypeScore=100.6949;InbreedingCoeff=0.5695;MQ=66.44;MQ0=13;MQRankSum=-0.412;QD=4.39;ReadPosRankSum=1.278;VQSLOD=2.0943;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:32:12.64:93,13,0	0/0:5,0:6:18.06:0,18,405	0/0:33,0:13:3.01:0,3,44	0/0:39,0:29:20.32:0,20,255	0/0:21,0:21:33.11:0,33,715	0/0:15,0:14:29.84:0,30,575	0/0:17,0:17:27.08:0,27,586	0/0:21,0:28:25.84:0,26,190	0/0:14,0:28:36.12:0,36,648	0/0:23,0:23:45.15:0,45,996	0/0:20,0:20:32.43:0,32,751	0/0:18,0:18:30.09:0,30,602	0/0:16,0:16:30.07:0,30,596	1/1:7,13:21:27.09:410,27,0	0/0:15,0:15:30.10:0,30,679	0/0:21,0:20:36.12:0,36,800	0/0:11,0:20:15.05:0,15,247	0/0:23,0:23:45.15:0,45,1012	0/1:18,1:18:26.96:27,0,313	0/0:21,0:21:36.06:0,36,791	0/0:44,0:44:59.67:0,60,1331	0/0:12,0:11:21.07:0,21,479	0/0:10,0:10:11.76:0,12,174	0/0:38,0:38:69.20:0,69,1480	0/0:21,0:21:38.85:0,39,804	0/1:17,1:19:8.90:9,0,690	0/0:20,0:20:47.90:0,48,1056	0/0:16,0:17:35.84:0,36,747
chr10	74365	.	TCC	T	2233.48	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.042;DP=521;FS=4.483;HRun=9;HaplotypeScore=64.0162;InbreedingCoeff=0.9772;MQ=80.08;MQ0=1;MQRankSum=-0.603;QD=24.82;ReadPosRankSum=3.642;VQSLOD=3.1594;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,34:39:84.25:979,84,0	0/0:6,0:6:9.01:0,9,122	0/0:23,0:21:56.87:0,57,726	0/0:20,0:19:45.15:0,45,602	0/0:27,0:27:78.23:0,78,1206	0/0:21,0:21:54.18:0,54,886	0/0:24,0:24:69.21:0,69,1073	0/0:16,0:16:33.10:0,33,502	1/1:1,17:18:48.14:559,48,0	0/0:17,0:17:48.15:0,48,744	0/0:14,0:15:41.63:0,42,641	0/0:14,0:14:39.13:0,39,635	0/0:17,0:18:42.14:0,42,683	0/0:12,0:12:30.08:0,30,441	0/0:19,0:19:54.16:0,54,839	0/0:11,0:11:30.10:0,30,492	1/1:4,28:32:72.21:838,72,0	0/0:20,0:22:56.56:0,57,886	0/0:15,0:15:45.13:0,45,679	0/0:15,0:15:36.11:0,36,566	0/0:38,0:39:99:0,108,1635	0/0:16,0:16:42.14:0,42,687	0/0:13,0:13:33.11:0,33,534	0/0:24,0:24:63.69:0,64,996	0/0:11,0:11:24.96:0,25,376	0/0:10,0:10:24.08:0,24,392	0/0:13,0:13:36.12:0,36,591	0/0:10,0:10:27.09:0,27,443
chr10	74731	.	GGT	G	416.55	PASS	AB=0.937;AC=20;AF=0.417;AN=48;BaseQRankSum=5.706;DP=620;FS=5.098;HRun=0;HaplotypeScore=87.3678;InbreedingCoeff=-0.3459;MQ=75.17;MQ0=16;MQRankSum=0.883;QD=1.17;ReadPosRankSum=0.691;VQSLOD=1.2559;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:46,2:47:38.40:38,0,85	0/0:5,0:5:3.01:0,3,43	./.	./.	0/0:19,0:21:6.01:0,6,69	0/1:17,0:17:34.62:35,0,45	0/1:26,0:27:15.57:16,0,158	./.	0/1:23,2:25:34.98:35,0,41	0/1:17,2:19:36.48:54,0,36	0/1:9,0:8:26.12:26,0,38	0/1:11,0:15:8.39:8,0,38	0/1:12,1:12:22.77:23,0,57	0/1:16,3:19:52.44:52,0,77	0/1:14,3:17:52.43:52,0,76	0/0:20,0:20:6.91:0,7,229	1/1:20,1:26:8.19:59,8,0	0/0:21,2:23:1.67:0,2,358	0/0:15,0:14:5.69:0,6,53	0/1:16,0:16:18.57:19,0,76	0/0:47,6:52:0.73:0,1,316	0/1:17,0:17:19.86:20,0,115	0/1:13,0:13:5.17:5,0,75	0/1:22,1:24:7.26:7,0,442	0/0:11,0:12:0.84:0,1,142	1/1:22,0:27:13.96:66,14,0	1/1:17,0:22:8.21:42,8,0	./.
chr10	74777	.	T	TCC	320.71	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.702;DP=506;FS=5.731;HRun=0;HaplotypeScore=77.5310;InbreedingCoeff=0.8937;MQ=69.67;MQ0=9;MQRankSum=-0.175;QD=5.53;ReadPosRankSum=-0.915;VQSLOD=2.2510;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:10,35:45:24.78:195,25,0	0/0:10,0:9:24.08:0,24,335	0/0:19,0:10:24.08:0,24,372	0/0:26,0:24:54.15:0,54,908	0/0:7,0:7:16.87:0,17,228	0/0:14,0:14:39.09:0,39,548	0/0:19,0:19:22.51:0,23,554	0/0:20,0:18:45.15:0,45,694	1/1:13,0:13:31.45:246,31,0	0/0:10,0:10:27.02:0,27,363	0/0:8,0:8:21.04:0,21,297	0/0:11,0:11:18.05:0,18,256	0/0:10,0:8:24.01:0,24,312	0/0:19,0:19:51.10:0,51,726	0/0:13,0:13:33.04:0,33,457	0/0:13,0:13:39.04:0,39,551	0/0:18,0:18:36.78:0,37,449	0/0:17,0:17:10.70:0,11,523	0/0:10,0:9:17.73:0,18,240	0/0:19,0:19:48.14:0,48,667	0/0:45,0:45:80.84:0,81,1132	0/0:16,0:16:7.23:0,7,515	0/0:21,0:21:63.20:0,63,906	0/0:35,0:35:99:0,99,1414	0/0:17,0:17:45.13:0,45,627	0/0:26,0:25:49.92:0,50,760	0/0:21,0:21:57.09:0,57,716	0/0:4,0:3:9.03:0,9,119
chr10	75207	.	A	AT	753.09	PASS	AB=1.000;AC=4;AF=0.071;AN=56;BaseQRankSum=0.412;DP=599;FS=1.271;HRun=10;HaplotypeScore=67.0698;InbreedingCoeff=0.4763;MQ=77.29;MQ0=5;MQRankSum=1.557;QD=7.10;ReadPosRankSum=0.644;VQSLOD=1.5464;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,37:42:59.58:839,60,0	0/0:7,0:7:14.98:0,15,123	0/1:42,0:22:17.51:18,0,148	0/1:22,0:18:7.66:8,0,57	0/0:28,0:28:68.85:0,69,557	0/0:31,0:31:92.75:0,93,743	0/0:16,0:16:44.61:0,45,353	0/0:41,0:41:99:0,102,811	0/0:17,0:17:20.18:0,20,57	0/0:27,0:27:40.14:0,40,487	0/0:15,0:15:38.82:0,39,311	0/0:18,0:18:53.88:0,54,434	0/0:12,0:13:38:0,38,301	0/0:16,0:16:29.06:0,29,286	0/0:12,0:13:28.96:0,29,222	0/0:13,0:13:35.91:0,36,287	0/0:2,0:13:18.33:0,18,53	0/0:21,0:21:30.16:0,30,424	0/0:23,0:23:47.74:0,48,382	0/0:22,0:22:65:0,65,505	0/0:15,0:16:29.92:0,30,242	0/0:24,0:24:62.90:0,63,513	0/0:21,0:21:62.89:0,63,511	0/0:8,0:8:23.92:0,24,188	0/0:24,0:24:59.91:0,60,492	0/0:24,0:25:64.94:0,65,519	0/0:28,0:28:71.77:0,72,568	0/0:13,0:13:35.96:0,36,295
chr10	76031	.	A	AT	1648.10	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=-2.362;DP=433;FS=9.441;HRun=1;HaplotypeScore=41.2437;InbreedingCoeff=0.7802;MQ=73.69;MQ0=3;MQRankSum=-1.604;QD=19.62;ReadPosRankSum=2.058;VQSLOD=2.9602;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,24:24:57.19:805,57,0	0/0:9,0:9:27.07:0,27,324	0/0:34,0:12:26.75:0,27,236	0/1:23,0:15:13.08:13,0,113	0/0:26,0:26:75.11:0,75,842	0/0:10,0:10:30.09:0,30,375	0/0:17,0:17:45.12:0,45,565	0/0:17,0:16:48.12:0,48,564	1/1:0,7:7:9.03:127,9,0	0/0:25,0:25:69.20:0,69,849	0/0:24,0:23:69.22:0,69,877	0/0:10,0:10:27.07:0,27,322	0/0:7,0:7:21.04:0,21,234	0/0:4,0:4:12.02:0,12,131	0/0:7,0:7:21.06:0,21,259	0/0:13,0:13:36.09:0,36,427	1/1:0,28:28:60.20:845,60,0	0/0:12,0:12:33.07:0,33,407	0/0:19,0:19:57.16:0,57,690	0/0:21,0:21:57.12:0,57,665	0/0:2,0:2:6.02:0,6,77	0/0:6,0:6:18.04:0,18,199	0/0:13,0:13:33.07:0,33,374	0/0:7,0:7:21.07:0,21,270	0/0:16,0:16:45.14:0,45,568	0/0:16,0:16:45.14:0,45,570	0/0:15,0:15:45.11:0,45,550	0/0:17,0:17:45.12:0,45,562
chr10	76321	.	ACTC	A	879.25	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.430;DP=364;FS=9.482;HRun=0;HaplotypeScore=63.4909;InbreedingCoeff=0.9472;MQ=98.02;MQ0=0;MQRankSum=-7.301;QD=32.56;ReadPosRankSum=0.571;VQSLOD=3.4213;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,16:16:33.11:542,33,0	0/0:6,0:6:18.06:0,18,443	0/0:19,0:19:57.17:0,57,1303	0/0:24,0:24:72.04:0,72,1583	0/0:10,0:10:30.10:0,30,695	0/0:13,0:13:39.13:0,39,957	0/0:9,0:8:24.08:0,24,566	0/0:24,0:24:72.24:0,72,1723	1/1:0,11:11:27.09:458,27,0	0/0:15,0:15:45.15:0,45,1061	0/0:13,0:13:39.13:0,39,924	0/0:13,0:13:39.13:0,39,908	0/0:10,0:10:30.10:0,30,710	0/0:20,0:20:48.16:0,48,1178	0/0:18,0:18:45.14:0,45,1060	0/0:11,0:11:30.10:0,30,739	0/0:7,0:7:21.07:0,21,385	0/0:5,0:5:15.02:0,15,283	0/0:19,0:19:57.20:0,57,1398	0/0:6,0:6:18.06:0,18,437	0/0:37,0:37:99:0,108,2494	0/0:5,0:5:15.05:0,15,368	0/0:5,0:5:15.05:0,15,370	0/0:7,0:6:12.04:0,12,257	0/0:8,0:8:24.08:0,24,589	0/0:14,0:14:42.14:0,42,1014	0/0:9,0:9:27.09:0,27,662	0/0:10,0:10:30.07:0,30,667
chr10	76352	.	GC	G	1527.98	PASS	AB=0.821;AC=42;AF=0.778;AN=54;BaseQRankSum=-0.512;DP=281;FS=12.127;HRun=11;HaplotypeScore=42.6374;InbreedingCoeff=0.2066;MQ=88.06;MQ0=2;MQRankSum=-1.124;QD=6.50;ReadPosRankSum=2.335;VQSLOD=0.3603;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:6,2:9:0.13:0,0,0	0/1:3,1:5:22.19:22,0,24	0/0:20,1:16:0.63:0,1,133	0/1:23,2:19:5.26:5,0,83	0/1:7,5:13:18.48:50,0,18	1/1:5,4:9:9.90:98,10,0	1/1:3,7:9:20.47:156,20,0	0/0:12,0:12:9.91:0,10,98	./.	1/1:3,3:6:2.99:25,3,0	1/1:5,1:6:2.72:24,3,0	1/1:4,7:11:14.94:119,15,0	1/1:3,4:7:8.97:74,9,0	1/1:7,10:18:23.94:196,24,0	1/1:3,7:10:11.97:98,12,0	1/1:4,6:9:12.85:100,13,0	1/1:7,0:7:2.58:28,3,0	1/1:2,4:7:11:78,11,0	1/1:4,8:12:17.19:146,17,0	1/1:1,2:3:2.99:25,3,0	1/1:12,13:25:26.92:221,27,0	1/1:3,2:5:2.13:23,2,0	1/1:1,2:4:5.02:30,5,0	1/1:1,9:9:14.98:123,15,0	1/1:3,0:3:2.49:9,2,0	0/0:6,0:6:6.02:0,6,64	0/1:9,0:9:9.60:10,0,104	0/1:7,1:8:9.66:10,0,93
chr10	76354	.	C	CT	60.42	PASS	AB=0.778;AC=3;AF=0.056;AN=54;BaseQRankSum=4.866;DP=285;FS=7.642;HRun=0;HaplotypeScore=52.3940;InbreedingCoeff=0.4267;MQ=88.87;MQ0=2;MQRankSum=-3.729;QD=3.78;ReadPosRankSum=-0.696;VQSLOD=1.6409;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,5:8:14.76:93,15,0	0/0:5,0:5:14.93:0,15,134	0/0:27,0:19:40.19:0,40,372	0/0:27,0:20:2.76:0,3,263	0/0:12,0:13:20.07:0,20,150	0/0:9,0:9:23.68:0,24,174	0/0:11,0:10:29.82:0,30,227	0/0:13,0:13:33.47:0,33,332	./.	0/0:5,0:5:5.91:0,6,39	0/0:7,0:7:8.93:0,9,69	0/0:12,0:11:23.75:0,24,178	0/0:7,0:7:17.87:0,18,130	0/0:16,0:16:35.76:0,36,266	0/0:10,0:10:20.90:0,21,162	0/0:10,0:9:23.84:0,24,183	0/1:5,2:7:13.91:68,0,14	0/0:7,0:7:14.87:0,15,108	0/0:14,0:14:34.59:0,35,230	0/0:3,0:3:8.94:0,9,67	0/0:23,0:23:53.72:0,54,412	0/0:6,0:6:13.24:0,13,66	0/0:4,0:4:8.78:0,9,52	0/0:9,0:8:14.87:0,15,105	0/0:4,0:3:8.98:0,9,74	0/0:6,0:6:12.02:0,12,136	0/0:9,0:9:26.94:0,27,261	0/0:8,0:8:23.61:0,24,249
chr10	83966	.	C	CA	1007.65	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.747;DP=625;FS=0.000;HRun=5;HaplotypeScore=66.2862;InbreedingCoeff=0.9399;MQ=60.07;MQ0=0;MQRankSum=0.248;QD=34.75;ReadPosRankSum=1.350;VQSLOD=3.8972;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:75.17:0,75,797	0/0:3,0:3:9.02:0,9,96	0/0:16,0:13:35.55:0,36,352	0/0:18,0:15:38.44:0,38,392	0/0:30,0:30:66.11:0,66,686	0/0:29,0:29:87.20:0,87,927	0/0:17,0:17:39.09:0,39,418	0/0:29,0:29:69.13:0,69,711	0/0:27,0:27:78.20:0,78,838	0/0:32,0:32:87.20:0,87,922	0/0:24,0:24:63.03:0,63,639	0/0:16,0:16:48.11:0,48,509	0/0:27,0:27:78.20:0,78,838	0/0:17,0:17:45.10:0,45,476	0/0:25,0:25:69.16:0,69,734	0/0:10,0:10:30.08:0,30,322	1/1:1,28:29:84.27:1102,84,0	0/0:10,0:10:27.04:0,27,280	0/0:17,0:17:48.10:0,48,506	0/0:36,0:36:96.22:0,96,1016	0/0:20,0:20:51.12:0,51,547	0/0:22,0:22:60.13:0,60,636	0/0:28,0:28:75.15:0,75,788	0/0:24,0:24:63.14:0,63,668	0/0:25,0:25:69.13:0,69,723	0/0:22,0:22:57.13:0,57,606	0/0:39,0:38:99:0,114,1208	0/0:7,0:7:21.05:0,21,226
chr10	84736	.	TAACAACAACAACAAC	T	1316.71	PASS	AB=0.594;AC=3;AF=0.054;AN=56;BaseQRankSum=6.392;DP=592;FS=0.992;HRun=0;HaplotypeScore=222.6598;InbreedingCoeff=0.7427;MQ=57.28;MQ0=5;MQRankSum=-6.316;QD=28.62;ReadPosRankSum=0.476;VQSLOD=2.7216;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:6,0:19:1.95:164,0,2	0/0:9,0:9:18.06:0,18,979	0/0:15,0:7:6.01:0,6,82	0/0:21,0:16:15.02:0,15,203	0/0:21,0:21:45.15:0,45,2586	0/0:13,0:13:36.12:0,36,2405	0/0:23,0:23:51.17:0,51,2664	0/0:33,0:33:45.15:0,45,1870	1/1:5,22:27:30.10:1259,30,0	0/0:20,0:20:48.16:0,48,3230	0/0:23,0:23:63.20:0,63,3453	0/0:9,0:17:36.09:0,36,1672	0/0:20,0:21:54.19:0,54,3583	0/0:18,0:18:54.19:0,54,3166	0/0:19,0:20:48.15:0,48,3104	0/0:16,0:16:45.15:0,45,3033	0/0:16,0:16:33.11:0,33,1651	0/0:22,0:22:25.30:0,25,2256	0/0:15,0:13:21.06:0,21,1028	0/0:29,0:29:69.17:0,69,4370	0/0:31,0:32:75.21:0,75,4371	0/0:31,0:31:75.26:0,75,5134	0/0:31,0:31:66.23:0,66,3755	0/0:35,0:35:66.22:0,66,3800	0/0:15,0:15:33.11:0,33,2173	0/0:17,0:17:27.09:0,27,1665	0/0:23,0:22:57.18:0,57,3404	0/0:10,0:10:21.07:0,21,1191
chr10	139099	.	A	AG	1312.45	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-8.107;DP=558;FS=0.000;HRun=6;HaplotypeScore=54.6460;InbreedingCoeff=0.9916;MQ=94.58;MQ0=0;MQRankSum=-1.981;QD=29.17;ReadPosRankSum=2.346;VQSLOD=4.2036;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:81.16:0,81,819	0/0:7,0:7:18.04:0,18,182	0/0:31,0:31:62.32:0,62,672	0/0:21,0:21:54.56:0,55,537	0/0:20,0:20:57.10:0,57,570	0/0:13,0:13:30.07:0,30,306	0/0:16,0:16:45.06:0,45,443	0/0:25,0:25:63.13:0,63,638	1/1:0,25:25:60.19:755,60,0	0/0:20,0:20:54.10:0,54,540	0/0:18,0:18:54.12:0,54,549	0/0:10,0:10:30.07:0,30,306	0/0:10,0:10:24.05:0,24,245	0/0:22,0:22:63.14:0,63,642	0/0:18,0:18:54.12:0,54,546	0/0:19,0:19:54.12:0,54,551	1/1:2,18:20:54.17:679,54,0	0/0:9,0:9:21.04:0,21,214	0/0:20,0:20:48.10:0,48,485	0/0:26,0:26:66.14:0,66,670	0/0:30,0:30:84.18:0,84,857	0/0:25,0:25:60.12:0,60,605	0/0:21,0:21:51.11:0,51,519	0/0:29,0:29:78.16:0,78,789	0/0:18,0:18:51.11:0,51,520	0/0:16,0:16:42.08:0,42,422	0/0:28,0:28:66.12:0,66,667	0/0:10,0:10:27.06:0,27,275
chr10	140752	.	A	ATGTGTGTGTGTGTG	1047.53	PASS	AB=0.800;AC=8;AF=0.143;AN=56;BaseQRankSum=5.184;DP=861;FS=0.000;HRun=0;HaplotypeScore=294.0465;InbreedingCoeff=0.6662;MQ=59.12;MQ0=14;MQRankSum=-4.560;QD=8.59;ReadPosRankSum=0.106;VQSLOD=1.9082;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,22:37:9.03:447,9,0	0/1:5,0:15:21.25:21,0,611	0/0:49,0:27:23.77:0,24,988	0/0:47,0:23:24.18:0,24,652	0/0:29,0:29:66.19:0,66,2372	0/0:30,0:30:66.11:0,66,1916	0/0:19,0:21:54.13:0,54,1603	0/0:36,0:35:81.22:0,81,2172	1/1:4,0:26:15.05:517,15,0	0/0:38,0:38:59.35:0,59,2590	0/0:27,0:27:81.22:0,81,2723	0/0:23,0:23:69.17:0,69,2197	0/0:23,0:23:48.07:0,48,1341	0/0:18,0:18:42.14:0,42,1639	0/0:41,0:41:99:0,111,3576	0/0:27,0:27:69.22:0,69,2499	1/1:10,0:26:9.03:190,9,0	0/1:18,0:17:14.54:15,0,965	0/0:31,0:30:56.12:0,56,1189	0/0:32,0:32:81.22:0,81,2797	0/0:56,0:56:99:0,123,3743	0/0:28,0:28:69.21:0,69,2532	0/0:29,0:29:84.19:0,84,2524	0/0:39,0:41:92.16:0,92,2647	0/0:21,0:21:57.15:0,57,1958	0/0:42,0:42:64:0,64,3239	0/0:36,0:36:99:0,99,2818	0/0:13,0:13:27.53:0,28,883
chr10	142277	.	CAG	C	651.70	PASS	AB=0.697;AC=3;AF=0.054;AN=56;BaseQRankSum=8.043;DP=682;FS=1.747;HRun=0;HaplotypeScore=90.5388;InbreedingCoeff=0.0303;MQ=57.98;MQ0=50;MQRankSum=-5.270;QD=7.85;ReadPosRankSum=-1.428;VQSLOD=3.0820;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:17,13:24:6.75:287,0,7	0/0:5,0:5:12.04:0,12,216	0/0:40,1:14:18.03:0,18,283	0/0:34,0:11:1.60:0,2,270	0/0:16,0:15:30.10:0,30,540	0/0:16,0:15:36.12:0,36,648	0/0:26,0:23:57.20:0,57,1001	0/0:20,0:12:27.07:0,27,456	0/1:16,10:24:46.40:222,0,46	0/0:22,0:22:60.20:0,60,1056	0/0:16,0:15:33.09:0,33,576	0/0:19,0:18:54.19:0,54,973	0/0:26,0:25:66.23:0,66,1187	0/0:31,0:31:84.27:0,84,1483	0/0:35,0:34:96.28:0,96,1667	0/0:19,0:19:51.17:0,51,918	0/1:12,13:18:88.68:242,0,89	0/0:23,0:21:25.62:0,26,888	0/0:22,0:17:36.12:0,36,649	0/0:26,0:26:58.07:0,58,997	0/0:57,0:49:97.50:0,97,1728	0/0:26,0:25:69.23:0,69,1215	0/0:17,0:17:36.12:0,36,628	0/0:42,0:42:99:0,99,1770	0/0:14,0:12:27.09:0,27,486	0/0:18,0:18:42.14:0,42,746	0/0:21,0:21:63.22:0,63,1117	0/0:7,0:6:15.05:0,15,270
chr10	142285	.	CAG	C	86.30	PASS	AB=0.916;AC=5;AF=0.089;AN=56;BaseQRankSum=5.299;DP=672;FS=2.447;HRun=0;HaplotypeScore=88.2743;InbreedingCoeff=-0.0978;MQ=53.17;MQ0=70;MQRankSum=-5.272;QD=0.65;ReadPosRankSum=-2.242;VQSLOD=1.5193;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:34,3:28:59.69:60,0,218	0/0:4,0:4:9.03:0,9,158	0/0:40,0:8:6.02:0,6,104	0/0:37,0:8:9.50:0,10,138	0/0:15,0:14:27.09:0,27,473	0/0:15,0:14:27.08:0,27,473	0/0:23,0:20:33.08:0,33,577	0/1:19,1:9:13:13,0,386	0/1:20,9:25:99:101,0,102	0/0:18,0:19:51.15:0,51,864	0/0:15,0:13:30.10:0,30,506	0/0:19,0:18:39.13:0,39,674	0/0:26,0:24:67.11:0,67,1143	0/0:28,0:28:78.27:0,78,1348	0/0:31,0:30:76.54:0,77,1340	0/0:20,0:19:42.13:0,42,709	0/1:30,2:24:19.53:20,0,270	0/0:23,0:21:24.85:0,25,766	0/0:20,0:13:27.09:0,27,461	0/0:21,0:21:36.80:0,37,605	0/0:57,2:47:95.68:0,96,1555	0/0:25,0:24:57.20:0,57,988	0/0:15,0:14:33.11:0,33,578	0/0:41,0:41:91.38:0,91,1573	0/1:14,0:12:1.65:2,0,323	0/0:15,0:14:27.08:0,27,446	0/0:21,0:21:54.18:0,54,942	0/0:7,0:6:15.05:0,15,263
chr10	142303	.	CAG	C	325.33	PASS	AB=0.765;AC=2;AF=0.037;AN=54;BaseQRankSum=6.635;DP=643;FS=2.728;HRun=0;HaplotypeScore=75.6343;InbreedingCoeff=-0.0598;MQ=45.23;MQ0=107;MQRankSum=-6.595;QD=4.52;ReadPosRankSum=-0.048;VQSLOD=2.3156;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:29,12:32:99:206,0,213	0/0:3,0:2:3.01:0,3,53	0/0:35,1:2:3.01:0,3,37	./.	0/0:13,0:11:21.06:0,21,340	0/0:13,0:11:24.06:0,24,385	0/0:20,0:16:24.05:0,24,361	0/0:22,0:6:17.26:0,17,229	0/0:30,0:23:9.93:0,10,369	0/0:21,0:14:33.11:0,33,565	0/0:11,0:9:21.07:0,21,368	0/0:20,0:16:39.13:0,39,674	0/0:29,0:26:65.03:0,65,1099	0/0:25,0:23:54.18:0,54,946	0/0:22,0:19:51.16:0,51,866	0/0:19,0:17:33.11:0,33,578	0/1:21,10:24:99:207,0,278	0/0:20,0:18:11.75:0,12,512	0/0:13,0:5:12.04:0,12,211	0/0:18,0:17:33.80:0,34,580	0/0:62,0:46:81.22:0,81,1372	0/0:22,0:18:48.16:0,48,842	0/0:14,0:10:24.08:0,24,397	0/0:47,0:44:91.49:0,91,1519	0/0:11,0:8:12.04:0,12,210	0/0:10,0:7:21.06:0,21,343	0/0:21,0:21:54.18:0,54,907	0/0:7,0:6:12.04:0,12,210
chr10	143307	.	C	CA	3018.68	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=12.785;DP=640;FS=0.915;HRun=4;HaplotypeScore=65.6931;InbreedingCoeff=0.9995;MQ=82.52;MQ0=0;MQRankSum=-2.837;QD=33.92;ReadPosRankSum=1.601;VQSLOD=4.3157;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,43:44:99:1641,123,0	0/0:11,0:11:30.08:0,30,340	0/0:15,0:15:36.10:0,36,408	0/0:24,0:24:64.92:0,65,683	0/0:18,0:18:54.15:0,54,613	0/0:33,0:33:87.20:0,87,971	0/0:13,0:13:33.09:0,33,374	0/0:35,0:35:99:0,99,1122	1/1:2,24:26:75.23:994,75,0	0/0:28,0:28:78.22:0,78,884	0/0:27,0:27:75.21:0,75,851	0/0:18,0:18:48.14:0,48,545	0/0:24,0:24:66.19:0,66,748	0/0:16,0:16:42.12:0,42,476	0/0:28,0:28:78.22:0,78,885	0/0:23,0:23:69.20:0,69,783	1/1:2,17:19:39.13:527,39,0	0/0:12,0:12:33.09:0,33,374	0/0:22,0:22:60.17:0,60,680	0/0:27,0:27:78.21:0,78,875	0/0:29,0:29:81.21:0,81,908	0/0:20,0:20:57.16:0,57,646	0/0:17,0:17:48.14:0,48,543	0/0:20,0:20:57.14:0,57,635	0/0:18,0:18:51.14:0,51,578	0/0:28,0:28:81.20:0,81,900	0/0:27,0:27:81.17:0,81,893	0/0:18,0:18:54.09:0,54,587
chr10	144950	.	A	AT	605.74	PASS	AB=0.814;AC=5;AF=0.089;AN=56;BaseQRankSum=7.306;DP=487;FS=9.173;HRun=0;HaplotypeScore=49.0506;InbreedingCoeff=-0.0977;MQ=40.70;MQ0=56;MQRankSum=-7.185;QD=6.58;ReadPosRankSum=4.136;VQSLOD=2.0922;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:19:51.17:0,51,707	0/0:11,0:11:30.10:0,30,411	0/0:20,0:7:17.99:0,18,211	0/0:32,0:15:41.30:0,41,489	0/0:26,0:25:68.37:0,68,902	0/0:14,0:13:39.09:0,39,520	0/0:13,0:13:36.12:0,36,501	0/0:16,0:13:36.10:0,36,485	0/0:13,0:12:36.12:0,36,500	0/0:14,0:11:33.11:0,33,459	0/0:10,0:8:21.05:0,21,274	0/1:12,3:14:11.51:12,0,419	0/0:15,0:13:39.13:0,39,540	0/0:13,0:13:39.13:0,39,536	0/0:11,0:10:30.10:0,30,413	0/1:10,7:15:99:288,0,288	0/0:17,0:16:39.09:0,39,521	0/0:8,0:8:17.98:0,18,208	0/0:43,0:15:42.13:0,42,570	0/0:14,0:13:39.13:0,39,540	0/0:20,0:19:45.15:0,45,628	0/1:16,3:17:94.43:94,0,496	0/1:21,7:24:99:266,0,560	0/1:11,2:12:61.58:62,0,343	0/0:19,0:18:48.09:0,48,644	0/0:15,0:14:39.12:0,39,528	0/0:20,0:20:39.20:0,39,725	0/0:8,0:7:21.07:0,21,293
chr10	145016	.	AAAAAAAAAG	A	174.58	PASS	AB=0.800;AC=2;AF=0.036;AN=56;BaseQRankSum=0.652;DP=461;FS=18.506;HRun=0;HaplotypeScore=73.8356;InbreedingCoeff=-0.0612;MQ=33.88;MQ0=75;MQRankSum=-3.540;QD=4.16;ReadPosRankSum=0.902;VQSLOD=0.2535;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:18,3:12:60.39:170,0,60	0/0:9,0:9:21.48:0,21,639	0/0:26,0:1:3.01:0,3,92	0/0:31,0:3:4.26:0,4,50	0/0:29,0:19:51.07:0,51,1499	0/0:9,0:9:20.92:0,21,575	0/0:10,0:6:12.51:0,13,410	0/0:18,0:4:9.03:0,9,307	0/0:11,0:6:14.86:0,15,143	0/0:12,0:9:27.04:0,27,786	0/0:26,0:19:32.87:0,33,1038	0/0:8,0:6:15.05:0,15,496	0/0:10,0:5:5.84:0,6,34	0/0:16,0:12:26.96:0,27,835	0/0:16,0:9:17.97:0,18,475	0/0:6,0:6:17.98:0,18,452	0/1:13,8:16:92.48:92,0,167	0/0:15,0:13:24.04:0,24,580	0/0:23,0:8:21.07:0,21,766	0/0:26,0:21:59.70:0,60,1466	0/0:9,0:5:12:0,12,318	0/0:8,0:5:15.05:0,15,339	0/0:15,0:11:31.05:0,31,608	0/0:11,0:9:14.77:0,15,400	0/0:21,0:14:39.08:0,39,1124	0/0:20,0:13:30.09:0,30,918	0/0:21,0:14:38.80:0,39,547	0/0:13,0:7:17.99:0,18,416
chr10	147786	.	A	ATAG	440.71	PASS	AB=0.979;AC=8;AF=0.154;AN=52;BaseQRankSum=-0.672;DP=543;FS=0.000;HRun=0;HaplotypeScore=90.0217;InbreedingCoeff=0.6298;MQ=61.39;MQ0=7;MQRankSum=0.630;QD=3.77;ReadPosRankSum=-2.612;VQSLOD=1.4875;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:17,9:26:17.93:340,18,0	0/0:14,0:14:33.09:0,33,414	./.	./.	0/0:18,0:19:24.04:0,24,294	0/0:14,0:14:12.02:0,12,141	0/0:16,0:16:18.06:0,18,234	1/1:37,0:37:6.02:78,6,0	0/1:21,1:23:8.99:9,0,489	0/0:29,0:29:51.07:0,51,603	0/0:26,0:28:39.06:0,39,471	0/0:16,0:16:27.09:0,27,349	0/0:17,0:19:24.03:0,24,280	0/0:12,0:12:21.07:0,21,273	0/0:13,0:13:21.04:0,21,244	0/0:14,0:14:27.07:0,27,335	1/1:11,0:11:12.01:144,12,0	0/0:14,0:14:15.93:0,16,197	0/0:17,0:15:12.03:0,12,145	0/0:21,0:22:32.58:0,33,386	0/0:19,0:20:24.02:0,24,266	0/0:9,0:9:6.02:0,6,78	0/0:15,0:16:18.02:0,18,216	0/0:21,0:21:10.51:0,11,164	0/1:20,0:20:5.50:5,0,415	0/0:23,0:24:36.08:0,36,451	0/0:30,0:30:51.15:0,51,650	0/0:11,0:11:12.04:0,12,156
chr10	148514	.	TGG	T	1584.65	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=9.023;DP=510;FS=0.621;HRun=5;HaplotypeScore=71.2314;InbreedingCoeff=0.9787;MQ=75.41;MQ0=0;MQRankSum=-3.217;QD=35.21;ReadPosRankSum=2.854;VQSLOD=3.1466;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,45:45:99:1680,120,0	0/0:9,0:9:27.09:0,27,482	0/0:16,0:15:34.12:0,34,678	0/0:16,0:15:25.90:0,26,727	0/0:31,0:31:87.30:0,87,1574	0/0:24,0:24:69.24:0,69,1265	0/0:9,0:9:24.06:0,24,402	0/0:24,0:24:69.23:0,69,1210	0/0:14,0:14:42.14:0,42,757	0/0:24,0:24:69.23:0,69,1224	0/0:23,0:23:66.23:0,66,1183	0/0:11,0:11:33.11:0,33,605	0/0:11,0:11:30.10:0,30,539	0/0:14,0:14:42.14:0,42,727	0/0:7,0:7:21.07:0,21,380	0/0:13,0:13:36.10:0,36,597	0/0:31,0:31:90.29:0,90,1620	0/0:8,0:8:21.07:0,21,372	0/0:18,0:18:54.18:0,54,925	0/0:36,0:36:99:0,105,1881	0/0:14,0:14:39.11:0,39,675	0/0:7,0:7:21.07:0,21,385	0/0:15,0:15:42.14:0,42,766	0/0:7,0:7:21.07:0,21,362	0/0:31,0:31:89.48:0,89,1474	0/0:20,0:20:57.20:0,57,1045	0/0:17,0:17:48.15:0,48,827	0/0:15,0:15:45.15:0,45,812
chr10	148875	.	AT	A	863.43	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.134;DP=655;FS=4.037;HRun=8;HaplotypeScore=59.4394;InbreedingCoeff=0.9987;MQ=65.75;MQ0=2;MQRankSum=0.276;QD=22.72;ReadPosRankSum=-0.624;VQSLOD=3.9104;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,1:27:38.35:0,38,819	0/0:13,0:13:39.12:0,39,471	0/0:30,0:25:54.14:0,54,623	0/0:15,0:12:23.91:0,24,262	0/0:27,0:27:69.20:0,69,821	0/0:26,0:26:75.19:0,75,890	0/0:22,0:22:66.20:0,66,797	0/0:27,0:27:66.17:0,66,774	0/0:24,0:24:66.20:0,66,797	0/0:29,0:29:66.20:0,66,795	0/0:31,0:31:81.23:0,81,961	0/0:19,0:19:51.14:0,51,605	1/1:1,22:23:66.11:637,66,0	1/1:1,14:15:36.05:348,36,0	0/0:21,0:21:60.18:0,60,725	0/0:17,0:17:51.13:0,51,594	0/0:19,0:19:57.13:0,57,661	0/0:15,0:15:39.12:0,39,471	0/0:16,0:16:45.13:0,45,534	0/0:40,0:40:99:0,102,1197	0/0:26,0:26:75.23:0,75,904	0/0:29,0:29:81.25:0,81,979	0/0:26,0:26:69.20:0,69,824	0/0:22,0:22:63.19:0,63,761	0/0:24,0:24:72.22:0,72,870	0/0:30,0:30:78.22:0,78,922	0/0:23,0:23:58.03:0,58,741	0/0:18,0:18:54.17:0,54,652
chr10	149987	.	G	GCC	4457.89	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-11.502;DP=596;FS=0.000;HRun=1;HaplotypeScore=64.6169;InbreedingCoeff=0.9992;MQ=76.08;MQ0=1;MQRankSum=-2.617;QD=49.53;ReadPosRankSum=3.448;VQSLOD=4.7739;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,33:34:87.30:1680,87,0	0/0:12,0:12:36.12:0,36,551	0/0:20,0:19:48.07:0,48,677	0/0:16,0:16:48.16:0,48,723	0/0:25,0:25:72.23:0,72,1066	0/0:31,0:31:93.30:0,93,1402	0/0:22,0:22:63.21:0,63,963	0/0:25,0:25:69.19:0,69,993	1/1:1,25:26:66.23:1271,66,0	0/0:23,0:22:63.21:0,63,960	0/0:17,0:17:51.14:0,51,736	0/0:21,0:21:60.20:0,60,917	0/0:17,0:17:51.17:0,51,781	0/0:11,0:11:30.10:0,30,459	0/0:22,0:22:54.18:0,54,824	0/0:20,0:20:60.20:0,60,917	1/1:0,29:29:78.27:1507,78,0	0/0:9,0:9:27.05:0,27,387	0/0:25,0:25:75.25:0,75,1146	0/0:34,0:34:99:0,99,1492	0/0:23,0:23:66.20:0,66,985	0/0:17,0:17:48.15:0,48,711	0/0:20,0:20:60.20:0,60,914	0/0:13,0:13:39.13:0,39,597	0/0:19,0:19:54.18:0,54,826	0/0:24,0:24:66.22:0,66,1010	0/0:29,0:29:87.30:0,87,1329	0/0:11,0:11:30.10:0,30,459
chr10	152031	.	GGT	G	2793.27	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=10.293;DP=605;FS=5.780;HRun=0;HaplotypeScore=69.4440;InbreedingCoeff=0.9996;MQ=83.93;MQ0=0;MQRankSum=-4.849;QD=41.69;ReadPosRankSum=2.023;VQSLOD=5.0851;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,17:17:48.16:783,48,0	0/0:9,0:9:27.09:0,27,531	0/0:26,0:26:78.26:0,78,1516	0/0:20,0:20:51.17:0,51,1016	0/0:19,0:19:57.20:0,57,1137	0/0:18,0:18:54.19:0,54,1097	0/0:19,0:19:57.18:0,57,1123	0/0:32,0:32:96.33:0,96,1917	1/1:0,29:29:72.25:1174,72,0	0/0:27,0:27:81.28:0,81,1638	0/0:17,0:17:51.18:0,51,1036	0/0:24,0:24:72.25:0,72,1462	0/0:15,0:15:45.15:0,45,874	0/0:23,0:23:69.24:0,69,1401	0/0:22,0:22:66.23:0,66,1322	0/0:17,0:17:51.18:0,51,1036	1/1:0,21:21:60.20:979,60,0	0/0:14,0:14:42.14:0,42,851	0/0:22,0:21:63.22:0,63,1273	0/0:27,0:27:81.28:0,81,1628	0/0:33,0:33:99:0,99,2011	0/0:20,0:20:57.20:0,57,1157	0/0:31,0:31:90.31:0,90,1827	0/0:21,0:21:63.22:0,63,1277	0/0:15,0:15:45.15:0,45,897	0/0:29,0:29:87.30:0,87,1747	0/0:25,0:24:75.26:0,75,1521	0/0:13,0:13:39.13:0,39,792
chr10	157541	.	T	TA	1140.48	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=4.376;DP=546;FS=8.590;HRun=10;HaplotypeScore=64.8379;InbreedingCoeff=0.9201;MQ=71.53;MQ0=4;MQRankSum=-0.697;QD=19.33;ReadPosRankSum=-1.126;VQSLOD=3.8068;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,2:25:47.58:0,48,493	0/0:3,0:3:8.99:0,9,74	0/0:22,0:15:4.25:0,4,96	0/0:23,0:16:13.48:0,13,119	0/0:25,0:25:59.87:0,60,485	0/0:21,0:20:43.05:0,43,392	0/0:9,0:9:26.97:0,27,222	0/0:25,1:27:35.95:0,36,488	0/0:19,1:19:22.84:0,23,366	0/0:22,0:22:50.01:0,50,417	0/0:18,0:18:47.93:0,48,394	0/0:20,0:20:56.93:0,57,466	0/0:16,0:16:41.94:0,42,345	0/0:17,0:17:40.72:0,41,322	0/0:20,0:20:56.65:0,57,449	0/0:15,0:16:43.99:0,44,351	0/0:23,0:23:46.84:0,47,365	0/0:9,0:9:20.97:0,21,172	0/0:18,0:18:19.17:0,19,317	0/0:28,0:28:71.88:0,72,591	0/0:21,0:21:47.87:0,48,384	0/0:22,0:22:53.82:0,54,429	0/0:17,0:17:41:0,41,380	0/0:25,0:25:62.64:0,63,502	0/0:19,0:19:47.02:0,47,392	1/1:4,12:16:36.06:366,36,0	1/1:5,19:24:47.89:502,48,0	1/1:4,15:19:39.10:414,39,0
chr10	159061	.	TA	T	1158.74	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=8.618;DP=467;FS=1.848;HRun=9;HaplotypeScore=48.6050;InbreedingCoeff=0.9851;MQ=69.83;MQ0=0;MQRankSum=-1.110;QD=19.00;ReadPosRankSum=2.396;VQSLOD=3.9501;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:78.16:0,78,901	0/0:10,0:10:24.07:0,24,277	0/0:12,0:10:19.02:0,19,217	0/0:15,0:15:26.95:0,27,325	0/0:27,0:27:69.19:0,69,786	0/0:20,0:20:57.15:0,57,640	0/0:7,0:7:18.05:0,18,208	0/0:35,0:34:81.23:0,81,925	1/1:1,9:10:18.01:165,18,0	0/0:20,0:20:57.17:0,57,658	0/0:21,0:21:57.17:0,57,655	0/0:5,0:5:15.04:0,15,173	0/0:10,0:10:27.08:0,27,311	0/0:10,0:10:27.08:0,27,311	0/0:14,0:14:36.11:0,36,415	0/0:11,0:11:27.06:0,27,301	0/0:31,0:31:81.21:0,81,921	0/0:18,0:18:48.14:0,48,552	0/0:30,0:30:69.19:0,69,786	0/0:23,0:23:63.19:0,63,725	0/0:11,0:11:24.06:0,24,267	0/0:11,0:11:24.07:0,24,277	0/0:11,0:11:30.09:0,30,346	0/0:9,0:9:24.07:0,24,277	0/0:13,0:13:33.10:0,33,381	1/1:2,16:18:48.02:439,48,0	1/1:2,11:13:23.90:220,24,0	1/1:0,20:20:54.03:494,54,0
chr10	159539	.	AATATATATATATATATATATATATATATATATATATATATATAT	A	592.59	PASS	AB=0.800;AC=5;AF=0.100;AN=50;BaseQRankSum=1.871;DP=156;FS=19.446;HRun=0;HaplotypeScore=150.2994;InbreedingCoeff=0.3023;MQ=78.40;MQ0=2;MQRankSum=-2.146;QD=28.22;ReadPosRankSum=1.320;VQSLOD=1.5899;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:12:11.99:0,12,286	./.	0/0:7,0:6:5.97:0,6,46	0/0:10,0:7:15.02:0,15,304	0/0:7,0:7:18.02:0,18,349	0/0:4,0:4:9.03:0,9,764	0/0:4,0:4:12.04:0,12,194	0/0:9,0:9:24.08:0,24,1610	./.	0/0:4,0:4:6.02:0,6,278	0/0:5,0:5:12.01:0,12,200	0/0:2,0:2:6.02:0,6,148	0/0:5,0:5:12.03:0,12,249	0/0:2,0:2:6.01:0,6,100	0/0:2,0:2:5.99:0,6,50	0/0:2,0:2:6.01:0,6,100	0/0:12,0:15:12.04:0,12,428	0/0:4,0:4:9.03:0,9,897	0/0:4,0:4:6.02:0,6,261	0/0:3,0:3:6.01:0,6,150	0/0:6,0:6:12:0,12,287	./.	0/0:2,0:2:3.01:0,3,100	0/0:3,0:3:6.02:0,6,648	0/0:4,0:4:12.04:0,12,771	0/1:3,1:4:20.98:327,0,21	1/1:10,2:12:3.01:253,3,0	1/1:5,0:4:6.02:118,6,0
chr10	160533	.	GT	G	761.62	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.220;DP=548;FS=5.397;HRun=2;HaplotypeScore=53.9680;InbreedingCoeff=0.9908;MQ=88.10;MQ0=0;MQRankSum=-3.677;QD=31.73;ReadPosRankSum=1.585;VQSLOD=3.1505;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:93.29:0,93,1370	0/0:10,0:10:30.10:0,30,449	0/0:17,0:17:48.16:0,48,714	0/0:20,0:21:47.01:0,47,730	0/0:21,0:21:63.21:0,63,944	0/0:20,0:20:57.19:0,57,854	0/0:21,0:21:63.21:0,63,943	0/0:34,0:34:99:0,99,1483	0/0:19,0:19:54.18:0,54,806	0/0:30,0:30:90.28:0,90,1326	0/0:19,0:19:57.17:0,57,812	0/0:16,0:16:48.15:0,48,701	0/0:10,0:10:30.10:0,30,448	0/0:12,0:12:36.12:0,36,538	0/0:10,0:10:30.10:0,30,450	0/0:10,0:10:30.09:0,30,432	1/1:0,24:24:66.21:856,66,0	0/0:8,0:8:24.08:0,24,360	0/0:21,0:21:63.21:0,63,941	0/0:27,0:27:81.26:0,81,1192	0/0:34,0:34:99:0,102,1507	0/0:18,0:18:54.17:0,54,791	0/0:17,0:17:48.16:0,48,717	0/0:23,0:23:66.22:0,66,988	0/0:9,0:9:27.09:0,27,402	0/0:31,0:31:87.29:0,87,1295	0/0:25,0:25:75.24:0,75,1104	0/0:7,0:7:21.07:0,21,315
chr10	160861	.	A	AT	2493.29	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-10.399;DP=565;FS=2.727;HRun=7;HaplotypeScore=54.0329;InbreedingCoeff=0.9692;MQ=79.92;MQ0=0;MQRankSum=0.147;QD=27.40;ReadPosRankSum=2.348;VQSLOD=4.4701;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:75.11:0,75,724	0/0:16,0:16:36.05:0,36,348	0/0:14,0:14:26.71:0,27,238	0/0:13,0:13:26.98:0,27,243	0/0:20,0:20:60.06:0,60,571	0/0:29,0:29:81.11:0,81,776	0/0:19,0:19:51.08:0,51,492	0/0:26,0:26:72.11:0,72,695	1/1:2,14:16:7.14:370,7,0	0/0:35,0:35:93.12:0,93,888	0/0:26,0:26:69.11:0,69,666	0/0:14,0:14:42.07:0,42,406	0/0:9,0:9:27.04:0,27,260	0/0:17,0:17:48.07:0,48,464	0/0:21,0:21:63.07:0,63,594	0/0:16,0:16:45.06:0,45,429	0/0:23,0:23:60.09:0,60,579	0/0:6,0:6:15.02:0,15,145	0/0:19,0:19:51.08:0,51,492	0/0:22,0:22:51.06:0,51,487	0/0:29,0:29:84.13:0,84,811	0/0:27,0:27:81.11:0,81,772	0/0:19,0:19:48.06:0,48,458	0/0:14,0:14:30.03:0,30,290	0/0:13,0:13:36.06:0,36,348	1/1:2,30:32:64.29:1046,64,0	1/1:3,33:36:81.25:979,81,0	1/1:0,7:7:21.06:254,21,0
chr10	161430	.	T	TA	608.74	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.193;DP=458;FS=9.903;HRun=0;HaplotypeScore=58.3701;InbreedingCoeff=0.8710;MQ=66.54;MQ0=0;MQRankSum=-0.556;QD=26.47;ReadPosRankSum=-0.059;VQSLOD=3.6915;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,21:23:60.01:704,60,0	0/0:10,0:10:27.09:0,27,378	0/0:11,0:10:21.03:0,21,271	0/0:4,0:4:6.02:0,6,81	0/0:26,0:26:78.23:0,78,1069	0/0:22,0:22:66.20:0,66,888	0/0:7,0:7:15.05:0,15,209	0/0:28,0:28:84.22:0,84,1120	0/0:18,0:18:45.78:0,46,279	0/0:24,0:24:69.22:0,69,946	0/0:18,0:18:54.18:0,54,754	0/0:8,0:8:24.08:0,24,336	0/0:16,0:16:48.16:0,48,666	0/0:21,0:21:60.20:0,60,835	0/0:10,0:10:30.09:0,30,405	0/0:12,0:12:36.12:0,36,503	0/0:28,0:28:66.95:0,67,388	0/0:8,0:8:24.05:0,24,315	0/0:19,0:19:57.15:0,57,732	0/0:20,0:20:60.16:0,60,785	0/0:6,0:6:18.05:0,18,236	0/0:9,0:9:27.08:0,27,362	0/0:14,0:14:42.13:0,42,569	0/0:9,0:9:27.09:0,27,377	0/0:29,0:29:87.28:0,87,1198	0/0:25,0:25:69.42:0,69,392	0/0:26,0:26:71.41:0,71,457	0/0:7,0:7:18.54:0,19,108
chr10	161621	.	AGAGAGAGACAGT	A	5740.82	PASS	AB=0.524;AC=7;AF=0.125;AN=56;BaseQRankSum=10.862;DP=744;FS=0.000;HRun=0;HaplotypeScore=250.1990;InbreedingCoeff=0.8364;MQ=73.90;MQ0=1;MQRankSum=-8.937;QD=63.79;ReadPosRankSum=1.962;VQSLOD=3.9420;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,102,5100	0/0:11,0:11:30.10:0,30,1685	0/0:56,0:38:84.67:0,85,2318	0/0:59,0:47:84.94:0,85,3133	0/0:31,0:31:81.28:0,81,3977	0/0:28,0:28:78.25:0,78,4084	0/0:22,0:22:47.85:0,48,2811	0/0:40,0:40:99:0,99,4403	1/1:0,25:25:45.15:1650,45,0	0/0:19,0:19:51.17:0,51,2670	0/0:18,0:18:51.18:0,51,2904	0/0:16,0:16:48.16:0,48,2459	0/0:31,0:31:90.31:0,90,4081	0/0:25,0:25:72.25:0,72,3924	0/0:22,0:22:54.19:0,54,2941	0/0:29,0:29:81.28:0,81,4483	0/0:28,0:28:68.81:0,69,2417	0/0:20,0:19:52.42:0,52,2829	0/0:22,0:22:57.18:0,57,2274	0/0:21,0:21:54.19:0,54,2936	0/0:24,0:24:69.22:0,69,3697	0/0:18,0:18:45.15:0,45,2430	0/0:19,0:19:57.20:0,57,2777	0/0:39,0:39:99:0,108,5665	0/0:19,0:19:54.19:0,54,2999	0/1:2,20:22:99:1536,0,305	1/1:5,26:31:42.14:1451,42,0	1/1:0,12:12:30.10:1103,30,0
chr10	162184	.	A	AT	1248.10	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-4.589;DP=660;FS=1.513;HRun=0;HaplotypeScore=63.6110;InbreedingCoeff=0.9917;MQ=83.35;MQ0=0;MQRankSum=-2.630;QD=41.60;ReadPosRankSum=1.677;VQSLOD=4.3651;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,162,2226	0/0:12,0:12:33.11:0,33,462	0/0:28,0:28:84.28:0,84,1174	0/0:30,0:30:72.21:0,72,1056	0/0:29,0:29:84.26:0,84,1143	0/0:16,0:16:45.14:0,45,612	0/0:26,0:26:78.26:0,78,1090	0/0:32,0:32:90.30:0,90,1259	0/0:23,0:23:69.21:0,69,947	0/0:24,0:24:72.24:0,72,1007	0/0:16,0:16:45.14:0,45,613	0/0:18,0:18:54.17:0,54,738	0/0:23,0:23:69.22:0,69,946	0/0:17,0:17:48.15:0,48,654	0/0:22,0:22:63.21:0,63,881	0/0:19,0:19:57.19:0,57,797	1/1:0,30:30:84.29:1343,84,0	0/0:16,0:16:48.16:0,48,671	0/0:23,0:23:66.21:0,66,905	0/0:33,0:33:96.32:0,96,1342	0/0:29,0:29:84.27:0,84,1159	0/0:28,0:28:84.28:0,84,1175	0/0:15,0:15:45.15:0,45,629	0/0:27,0:27:81.27:0,81,1131	0/0:35,0:35:99:0,105,1452	0/0:15,0:15:45.15:0,45,630	0/0:13,0:13:39.13:0,39,543	0/0:6,0:6:18.06:0,18,252
chr10	163809	.	T	TG	1096.60	PASS	AB=0.723;AC=9;AF=0.173;AN=52;BaseQRankSum=8.015;DP=495;FS=37.113;HRun=0;HaplotypeScore=45.4854;InbreedingCoeff=0.5187;MQ=45.40;MQ0=51;MQRankSum=-8.808;QD=17.13;ReadPosRankSum=-0.249;VQSLOD=2.1726;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,3:4:5.95:62,6,0	0/0:10,0:10:30.10:0,30,419	0/0:5,0:1:3.01:0,3,39	0/1:12,0:2:35.93:37,0,36	0/0:32,0:32:84.27:0,84,1159	0/0:30,0:30:69.23:0,69,957	0/0:8,0:7:12.04:0,12,167	./.	1/1:2,5:3:6.02:89,6,0	0/0:34,0:33:96.32:0,96,1329	0/0:23,0:22:48.16:0,48,671	0/0:12,0:12:30.09:0,30,404	0/0:17,0:17:33.11:0,33,455	0/0:17,0:15:45.15:0,45,628	0/0:18,0:18:51.17:0,51,707	0/0:9,0:9:18.06:0,18,250	./.	0/0:18,0:16:27.84:0,28,379	0/0:28,0:12:36.11:0,36,481	0/0:30,0:29:81.18:0,81,1088	0/0:22,0:17:48.07:0,48,613	0/0:24,0:24:47.99:0,48,639	0/0:22,0:22:60.20:0,60,833	0/0:17,0:17:42.13:0,42,571	0/0:27,0:27:75.24:0,75,1034	0/1:4,10:12:47.84:373,0,48	0/1:5,12:11:6.52:371,0,7	1/1:0,8:8:21.07:308,21,0
chr10	163855	.	TCCTAA	T	263.30	PASS	AB=0.661;AC=3;AF=0.068;AN=44;BaseQRankSum=3.966;DP=585;FS=0.000;HRun=0;HaplotypeScore=69.3063;InbreedingCoeff=-0.0366;MQ=30.90;MQ0=219;MQRankSum=-3.515;QD=4.88;ReadPosRankSum=-0.511;VQSLOD=0.7760;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:6,0:5:15.05:0,15,476	./.	./.	0/0:26,0:23:63.20:0,63,1818	0/0:35,0:25:51.17:0,51,1413	0/0:19,0:4:12.04:0,12,327	./.	./.	0/0:27,0:20:60.21:0,60,1816	0/0:27,0:24:54.19:0,54,1641	0/0:15,0:7:15.05:0,15,408	0/0:28,0:17:27.09:0,27,796	0/0:24,0:13:39.13:0,39,1012	0/0:24,0:11:27.09:0,27,795	0/0:14,0:9:18.06:0,18,570	./.	0/0:23,0:18:36.12:0,36,1073	0/0:23,0:9:27.09:0,27,833	0/0:37,0:25:63.22:0,63,1990	0/0:20,0:14:39.10:0,39,1037	0/0:27,0:26:60.21:0,60,1898	0/0:26,0:21:54.08:0,54,1519	0/0:19,0:12:24.08:0,24,702	0/0:20,0:17:45.15:0,45,1426	0/1:15,12:9:99:118,0,178	0/1:11,11:6:85.90:121,0,86	0/1:2,3:4:11.76:121,0,12
chr10	166981	.	T	TC	45.25	PASS	AC=2;AF=0.038;AN=52;BaseQRankSum=0.424;DP=573;FS=0.000;HRun=2;HaplotypeScore=37.3703;InbreedingCoeff=0.8227;MQ=35.00;MQ0=81;MQRankSum=-1.918;QD=11.31;ReadPosRankSum=-0.305;VQSLOD=1.4900;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:20:54.08:0,54,619	0/0:7,0:6:12.04:0,12,147	./.	./.	0/0:23,0:18:35.94:0,36,376	0/0:24,0:16:27.08:0,27,333	0/0:22,0:17:45.08:0,45,524	0/0:35,0:12:35.98:0,36,378	0/0:19,0:12:15.05:0,15,185	0/0:25,0:14:39.11:0,39,469	0/0:22,0:18:30.03:0,30,349	0/0:10,0:8:12:0,12,131	0/0:15,0:14:23.89:0,24,240	0/0:17,0:15:30.09:0,30,370	0/0:19,0:19:39.07:0,39,463	0/0:14,0:14:36.06:0,36,414	1/1:0,4:4:9.03:128,9,0	0/0:26,0:18:32.82:0,33,395	0/0:27,0:16:48.08:0,48,552	0/0:29,0:17:33.06:0,33,389	0/0:19,0:11:18.06:0,18,222	0/0:17,0:14:32.95:0,33,353	0/0:24,0:11:12.04:0,12,148	0/0:31,1:26:45.10:0,45,538	0/0:21,0:13:18:0,18,203	0/0:32,0:22:63.13:0,63,737	0/0:41,0:18:39.12:0,39,481	0/0:19,0:11:24.07:0,24,295
chr10	171732	.	CA	C	219.83	PASS	AB=0.879;AC=7;AF=0.146;AN=48;BaseQRankSum=2.810;DP=301;FS=4.158;HRun=13;HaplotypeScore=79.1174;InbreedingCoeff=0.3298;MQ=66.59;MQ0=1;MQRankSum=1.056;QD=3.66;ReadPosRankSum=1.028;VQSLOD=0.9665;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:9,5:14:47.69:48,0,70	0/1:7,1:9:7.04:7,0,87	0/0:13,0:10:6.75:0,7,60	0/1:13,0:12:9.44:9,0,73	0/0:21,2:23:4.09:0,4,326	0/0:13,0:13:18.02:0,18,170	0/0:6,0:6:12.02:0,12,116	./.	1/1:2,8:9:14.87:109,15,0	0/0:20,1:21:2.11:0,2,172	0/0:12,0:14:26.78:0,27,228	0/0:6,0:6:11.89:0,12,95	0/0:7,0:7:8.94:0,9,70	0/0:12,0:11:17.96:0,18,155	0/0:13,0:13:20.99:0,21,182	0/0:12,0:11:21.03:0,21,204	1/1:2,12:13:23.86:175,24,0	0/0:16,1:17:11.15:0,11,270	0/0:11,1:12:5.13:0,5,210	0/0:14,1:20:22.55:0,23,312	0/0:8,1:9:2.13:0,2,182	0/0:9,0:9:18.03:0,18,175	0/0:13,2:15:8.07:0,8,223	0/0:7,0:7:15.01:0,15,140	0/0:11,0:12:17.78:0,18,141	./.	./.	./.
chr10	172431	.	T	TA	53.21	PASS	AC=2;AF=0.037;AN=54;BaseQRankSum=-0.550;DP=182;FS=0.000;HRun=8;HaplotypeScore=17.6935;InbreedingCoeff=0.4468;MQ=58.69;MQ0=0;MQRankSum=0.340;QD=13.30;ReadPosRankSum=-1.429;VQSLOD=0.9293;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:27.01:0,27,247	0/0:4,0:3:9:0,9,82	0/0:3,0:3:8.22:0,8,62	./.	0/0:10,0:9:27.01:0,27,247	0/0:7,0:7:18.01:0,18,165	0/0:1,0:1:3:0,3,27	0/0:15,0:15:36:0,36,326	0/0:4,0:4:12.01:0,12,110	0/0:11,0:10:30.02:0,30,275	0/0:13,0:13:39.01:0,39,353	0/0:6,0:6:18.01:0,18,165	0/0:5,0:5:15.01:0,15,137	0/0:2,0:2:6:0,6,55	0/0:7,0:7:18.01:0,18,165	0/0:6,0:6:15:0,15,133	1/1:0,4:4:12.04:138,12,0	0/0:5,0:5:12:0,12,110	0/0:13,0:13:36.02:0,36,329	0/0:11,0:11:33.02:0,33,302	0/0:3,0:3:9:0,9,82	0/0:1,0:1:3:0,3,27	0/0:4,0:4:6:0,6,55	0/0:2,0:2:6:0,6,55	0/0:6,0:6:18.01:0,18,165	0/0:5,0:5:12.01:0,12,110	0/0:15,0:15:45.02:0,45,412	0/0:9,0:9:26.92:0,27,235
chr10	172697	.	A	AAT	941.47	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-5.515;DP=517;FS=0.916;HRun=0;HaplotypeScore=57.4161;InbreedingCoeff=0.9817;MQ=78.48;MQ0=0;MQRankSum=-2.915;QD=52.30;ReadPosRankSum=1.267;VQSLOD=4.3659;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:93.32:0,93,1507	0/0:6,0:6:15.05:0,15,241	0/0:15,0:15:45.15:0,45,725	0/0:22,0:22:63.21:0,63,988	0/0:18,0:17:51.16:0,51,803	0/0:20,0:20:60.20:0,60,976	0/0:14,0:14:42.14:0,42,685	0/0:38,0:38:99:0,105,1712	0/0:18,0:18:54.12:0,54,826	0/0:20,0:20:60.20:0,60,958	0/0:14,0:14:36.12:0,36,587	0/0:22,0:22:66.23:0,66,1076	0/0:20,0:20:60.20:0,60,976	0/0:16,0:16:48.16:0,48,783	0/0:23,0:23:66.21:0,66,1047	0/0:14,0:14:42.14:0,42,685	1/1:0,17:18:51.18:1036,51,0	0/0:11,0:11:30.10:0,30,486	0/0:18,0:18:54.17:0,54,855	0/0:14,0:14:36.12:0,36,587	0/0:16,0:16:48.12:0,48,754	0/0:9,0:9:27.09:0,27,440	0/0:17,0:17:45.15:0,45,732	0/0:16,0:16:48.16:0,48,783	0/0:15,0:15:45.15:0,45,734	0/0:22,0:22:60.20:0,60,979	0/0:40,0:40:99:0,120,1929	0/0:9,0:9:27.08:0,27,415
chr10	172875	.	GT	G	1572.34	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=13.356;DP=625;FS=2.959;HRun=3;HaplotypeScore=84.4216;InbreedingCoeff=0.8211;MQ=73.19;MQ0=0;MQRankSum=-2.659;QD=14.83;ReadPosRankSum=2.036;VQSLOD=3.2879;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:5.92:0,6,33	0/0:2,0:2:3.01:0,3,43	0/0:28,0:27:68.19:0,68,745	0/0:16,0:15:44.71:0,45,577	0/0:34,0:34:95.15:0,95,1369	0/0:28,0:28:84.27:0,84,1173	0/0:14,0:14:42.12:0,42,550	0/0:29,0:29:72.69:0,73,997	1/1:22,0:22:55.84:299,56,0	0/0:29,0:29:84.21:0,84,1082	0/0:31,0:31:80.66:0,81,1111	0/0:22,0:22:66.15:0,66,843	0/0:18,0:18:54.17:0,54,751	0/0:18,0:18:49.97:0,50,679	0/0:15,0:15:45.11:0,45,580	0/0:15,0:15:45.12:0,45,594	1/1:0,21:21:54.17:666,54,0	0/0:20,0:20:60.14:0,60,816	0/0:21,1:22:51.16:0,51,753	0/0:33,0:33:89.67:0,90,1220	0/0:19,0:19:57.09:0,57,683	0/0:21,0:21:63.19:0,63,870	0/0:26,0:26:71.03:0,71,979	0/0:24,0:24:72.24:0,72,1028	0/0:19,0:19:54.16:0,54,743	0/1:23,0:23:9:293,0,9	1/1:30,0:30:76.55:359,77,0	1/1:10,0:10:24.89:120,25,0
chr10	172878	.	TA	T	951.16	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.877;DP=624;FS=6.307;HRun=10;HaplotypeScore=85.2691;InbreedingCoeff=0.9361;MQ=69.78;MQ0=0;MQRankSum=-3.341;QD=16.69;ReadPosRankSum=2.909;VQSLOD=4.1821;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,35:35:99:885,102,0	0/0:3,0:3:8.99:0,9,81	0/0:22,1:22:10:0,10,371	0/0:16,0:15:44.35:0,44,440	0/0:34,1:35:73.22:0,73,1036	0/0:30,0:30:87.22:0,87,947	0/0:14,0:14:33.09:0,33,365	0/0:26,1:27:49.13:0,49,755	0/0:22,0:22:49.46:0,49,221	0/0:29,0:29:60.16:0,60,663	0/0:28,1:29:52.15:0,52,795	0/0:20,0:20:51.13:0,51,557	0/0:18,0:18:51.13:0,51,557	0/0:17,1:18:22.08:0,22,472	0/0:17,0:17:42.07:0,42,442	0/0:15,0:15:39.08:0,39,415	1/1:22,0:22:27.47:187,27,0	0/0:20,0:20:54.15:0,54,597	0/0:21,2:23:16.57:0,17,478	0/0:33,1:34:64.10:0,64,896	0/0:18,0:18:38.97:0,39,413	0/0:23,0:23:63.15:0,63,681	0/0:24,1:26:43.85:0,44,691	0/0:25,0:25:75.16:0,75,816	0/0:19,0:19:51.12:0,51,549	0/0:23,0:23:18.50:0,19,179	0/0:30,0:30:76.85:0,77,344	0/0:10,0:10:24.70:0,25,110
chr10	172882	.	A	AAC	3621	PASS	AB=0.548;AC=7;AF=0.125;AN=56;BaseQRankSum=8.132;DP=638;FS=3.356;HRun=0;HaplotypeScore=90.8853;InbreedingCoeff=0.8281;MQ=68.88;MQ0=0;MQRankSum=-2.217;QD=41.15;ReadPosRankSum=1.737;VQSLOD=5.4611;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,108,875	0/0:4,0:4:12.02:0,12,142	0/0:22,0:21:47.42:0,47,646	0/0:16,0:15:45.14:0,45,628	0/0:36,0:36:99:0,102,1503	0/0:29,0:29:87.29:0,87,1296	0/0:14,0:14:36.10:0,36,523	0/0:28,0:28:78.24:0,78,1140	1/1:0,23:23:54.18:924,54,0	0/0:30,0:30:81.23:0,81,1104	0/0:29,0:29:87.25:0,87,1221	0/0:21,0:21:60.17:0,60,834	0/0:17,0:17:51.16:0,51,752	0/0:18,0:18:54.14:0,54,756	0/0:17,0:17:51.13:0,51,670	0/0:14,0:14:42.12:0,42,597	0/0:23,0:23:57.18:0,57,710	0/0:20,0:20:60.15:0,60,856	0/0:26,0:26:69.14:0,69,872	0/0:34,0:34:99:0,102,1420	0/0:17,0:17:48.11:0,48,663	0/0:25,0:25:66.21:0,66,962	0/0:27,0:27:77.82:0,78,1101	0/0:26,0:26:78.24:0,78,1140	0/0:20,0:20:60.15:0,60,829	0/1:4,19:23:31.20:784,0,31	1/1:1,31:32:83.71:1448,84,0	1/1:0,10:10:27.09:466,27,0
chr10	173188	.	AGG	A	931.29	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=8.347;DP=659;FS=5.358;HRun=2;HaplotypeScore=91.2999;InbreedingCoeff=0.9918;MQ=63.93;MQ0=2;MQRankSum=-0.449;QD=30.04;ReadPosRankSum=0.997;VQSLOD=3.3964;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,132,2665	0/0:6,0:6:18.06:0,18,363	0/0:26,0:23:57.62:0,58,1201	0/0:25,0:25:72.70:0,73,1398	0/0:31,0:31:75.05:0,75,1519	0/0:25,0:25:48.16:0,48,973	0/0:31,0:31:93.28:0,93,1826	0/0:20,0:19:57.20:0,57,1144	0/0:27,0:27:69.22:0,69,1339	0/0:16,0:16:48.16:0,48,976	0/0:21,0:21:63.22:0,63,1276	0/0:16,0:16:45.15:0,45,912	0/0:13,0:13:39.13:0,39,776	0/0:21,0:21:63.19:0,63,1241	0/0:21,0:20:48.16:0,48,956	0/0:18,0:18:51.12:0,51,958	1/1:10,21:31:72.21:1026,72,0	0/0:14,0:14:42.14:0,42,853	0/0:27,0:27:78.27:0,78,1579	0/0:16,0:16:48.16:0,48,942	0/0:49,0:49:99:0,144,2740	0/0:26,0:26:75.25:0,75,1484	0/0:25,0:25:60.19:0,60,1219	0/0:27,0:27:75.24:0,75,1486	0/0:14,0:14:39.13:0,39,779	0/0:18,0:18:54.16:0,54,1016	0/0:30,0:29:81.28:0,81,1640	0/0:18,0:18:42.05:0,42,713
chr10	173307	.	TC	T	1368.15	PASS	AB=0.909;AC=9;AF=0.173;AN=52;BaseQRankSum=4.200;DP=547;FS=0.721;HRun=1;HaplotypeScore=55.3559;InbreedingCoeff=0.8365;MQ=41.86;MQ0=72;MQRankSum=-0.638;QD=15.91;ReadPosRankSum=1.985;VQSLOD=3.7057;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:33:33.04:0,33,444	0/0:16,0:15:36.03:0,36,468	./.	./.	0/0:21,0:16:23.93:0,24,323	0/0:17,0:17:27.09:0,27,376	0/0:10,0:8:15.03:0,15,189	0/0:31,0:6:15.02:0,15,193	1/1:1,21:21:30.10:418,30,0	0/0:26,0:24:69.21:0,69,940	0/0:18,0:18:23.98:0,24,295	0/0:20,0:17:27.04:0,27,359	0/0:14,0:12:36.01:0,36,434	0/0:21,0:20:27.09:0,27,385	0/0:15,0:14:20.95:0,21,253	0/1:9,1:10:21.80:22,0,234	0/0:23,0:17:21.07:0,21,298	0/0:7,0:3:9.01:0,9,110	0/0:29,0:22:57.13:0,57,759	0/0:23,0:23:57.11:0,57,783	0/0:12,0:9:24.07:0,24,324	0/0:23,0:20:39.05:0,39,513	0/0:24,0:18:35.91:0,36,451	0/0:23,0:20:30.06:0,30,371	0/0:23,0:19:30.05:0,30,401	1/1:0,14:12:30.05:380,30,0	1/1:0,25:25:36.12:501,36,0	1/1:1,14:15:15.05:209,15,0
chr10	173741	.	AG	A	1338.46	PASS	AB=0.525;AC=5;AF=0.089;AN=56;BaseQRankSum=6.081;DP=507;FS=0.607;HRun=2;HaplotypeScore=47.8822;InbreedingCoeff=0.6959;MQ=63.02;MQ0=27;MQRankSum=-0.963;QD=25.74;ReadPosRankSum=2.292;VQSLOD=3.3243;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:84.13:0,84,1093	0/0:7,0:7:15.04:0,15,204	0/0:39,1:18:10.31:0,10,422	0/0:29,0:5:9.02:0,9,117	0/0:18,0:18:45.08:0,45,634	0/0:13,0:13:33.08:0,33,448	0/0:17,0:17:42.04:0,42,556	0/0:19,0:14:38.72:0,39,534	0/0:18,0:18:45.12:0,45,607	0/0:26,0:25:75.21:0,75,1038	0/0:25,0:25:63.06:0,63,795	0/0:12,0:12:36.09:0,36,487	0/0:21,0:21:51.14:0,51,706	0/0:11,0:11:24.08:0,24,355	0/0:19,0:19:51.13:0,51,695	0/0:21,0:21:54.17:0,54,779	0/0:15,0:14:30.06:0,30,402	0/0:9,0:9:11.43:0,11,295	0/0:17,0:15:44.93:0,45,615	0/0:20,0:20:51.15:0,51,706	0/0:13,0:13:39.11:0,39,554	0/0:12,0:12:30.09:0,30,424	0/0:15,0:15:39.01:0,39,500	0/0:10,0:10:18.06:0,18,266	0/0:9,0:9:18.05:0,18,246	0/1:2,19:21:25.59:649,0,26	1/1:2,22:24:54.17:696,54,0	1/1:2,5:5:9.03:116,9,0
chr10	173918	.	CAAAAGAA	C	1535.93	PASS	AB=0.971;AC=12;AF=0.214;AN=56;BaseQRankSum=7.428;DP=492;FS=2.633;HRun=0;HaplotypeScore=112.4078;InbreedingCoeff=0.7530;MQ=77.21;MQ0=1;MQRankSum=-5.918;QD=10.82;ReadPosRankSum=1.826;VQSLOD=2.4805;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:31:36.04:0,36,882	0/0:12,0:12:12.04:0,12,435	0/1:39,0:26:0:0,0,0	0/0:17,0:11:7.43:0,7,202	0/0:19,0:19:21.07:0,21,762	0/0:17,0:17:33.11:0,33,1182	0/0:12,0:12:15.05:0,15,509	0/0:19,0:19:18.06:0,18,560	1/1:9,9:18:21.07:465,21,0	0/0:21,0:21:42.14:0,42,1444	0/0:23,0:23:33.11:0,33,1177	0/0:9,0:9:15.01:0,15,442	0/0:15,0:15:24.08:0,24,847	0/0:10,0:10:12.03:0,12,353	0/0:21,0:21:42.14:0,42,1507	0/0:17,0:17:27.09:0,27,921	1/1:14,0:19:9:119,9,0	0/0:17,0:17:21.07:0,21,674	0/1:15,1:15:51.44:51,0,420	0/0:23,0:23:42.10:0,42,1405	0/0:8,0:8:9.03:0,9,290	0/0:11,0:11:15.05:0,15,530	0/0:23,0:23:38.82:0,39,1326	0/0:6,0:6:15.05:0,15,484	0/0:19,0:19:24.08:0,24,838	1/1:7,10:16:27.03:470,27,0	1/1:18,11:29:24.08:532,24,0	1/1:4,0:4:3.01:63,3,0
chr10	175102	.	CCCTTTGT	C	756.67	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.396;DP=730;FS=11.610;HRun=0;HaplotypeScore=163.4237;InbreedingCoeff=0.9993;MQ=65.27;MQ0=1;MQRankSum=-5.494;QD=39.82;ReadPosRankSum=2.992;VQSLOD=2.7329;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,123,4846	0/0:13,0:13:39.13:0,39,1535	0/0:28,0:25:73.80:0,74,2660	0/0:23,0:22:53.83:0,54,1925	0/0:17,0:17:51.18:0,51,1983	0/0:22,0:22:66.23:0,66,2542	0/0:32,0:32:90.31:0,90,3486	0/0:35,0:35:85.53:0,86,3175	0/0:39,0:39:99:0,111,4312	0/0:31,0:31:90.30:0,90,3277	0/0:15,0:15:42.14:0,42,1667	0/0:16,0:16:48.16:0,48,1901	0/0:27,0:27:81.28:0,81,3068	0/0:31,0:31:90.31:0,90,3432	0/0:32,0:32:93.32:0,93,3648	0/0:15,0:15:45.15:0,45,1715	1/1:1,18:19:33.11:851,33,0	0/0:24,0:24:72.25:0,72,2771	0/0:26,0:26:66.23:0,66,2478	0/0:23,0:23:69.24:0,69,2672	0/0:54,0:53:99:0,157,6077	0/0:25,0:25:72.25:0,72,2848	0/0:12,0:12:33.11:0,33,1288	0/0:44,0:44:99:0,126,4934	0/0:16,0:16:45.15:0,45,1800	0/0:27,0:27:78.27:0,78,2970	0/0:29,0:29:87.30:0,87,3312	0/0:13,0:13:39.13:0,39,1558
chr10	175760	.	TC	T	496.30	PASS	AB=0.849;AC=10;AF=0.179;AN=56;BaseQRankSum=1.911;DP=330;FS=7.422;HRun=4;HaplotypeScore=58.3354;InbreedingCoeff=-0.0244;MQ=68.90;MQ0=7;MQRankSum=-3.421;QD=5.64;ReadPosRankSum=0.132;VQSLOD=-0.4840;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,1:22:13.97:0,14,496	0/0:5,0:5:12.04:0,12,168	0/0:16,1:11:11.42:0,11,84	0/0:25,2:20:20.16:0,20,132	0/0:3,0:3:6.02:0,6,84	0/1:7,1:8:20.58:21,0,110	0/1:12,2:13:5.38:5,0,309	0/1:6,2:8:53.05:53,0,136	1/1:2,11:13:30.09:356,30,0	0/0:10,0:10:21.07:0,21,294	0/1:7,0:7:8.54:9,0,191	0/0:6,2:6:9.02:0,9,108	0/0:6,1:5:12.04:0,12,168	0/0:8,0:8:5.61:0,6,142	0/1:6,1:7:20.75:21,0,134	0/1:7,1:8:44.80:45,0,110	0/0:19,0:18:32.48:0,32,337	0/0:7,2:8:18.02:0,18,221	0/1:11,5:12:91.24:91,0,105	0/1:4,3:7:39.78:40,0,148	0/0:34,0:32:35.82:0,36,451	0/0:5,0:5:11.75:0,12,138	0/0:5,0:5:12.04:0,12,167	0/0:10,0:10:2.97:0,3,133	0/0:7,0:7:11.71:0,12,137	0/0:16,2:18:6.24:0,6,492	0/0:17,0:17:42.14:0,42,575	0/0:7,0:7:21.03:0,21,254
chr10	175776	.	TG	T	2753.43	PASS	AB=0.571;AC=48;AF=0.889;AN=54;BaseQRankSum=-3.049;DP=139;FS=7.280;HRun=1;HaplotypeScore=23.3938;InbreedingCoeff=0.2691;MQ=74.30;MQ0=1;MQRankSum=-3.181;QD=22.57;ReadPosRankSum=1.380;VQSLOD=3.1674;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,9:9:21.02:244,21,0	1/1:0,2:2:3.01:38,3,0	0/0:6,0:5:4.83:0,5,54	0/0:9,0:5:11.96:0,12,120	1/1:0,2:2:6.02:74,6,0	1/1:0,3:3:2.97:20,3,0	1/1:2,2:4:9.02:103,9,0	1/1:1,6:7:15.05:194,15,0	1/1:2,4:6:17.99:191,18,0	1/1:0,5:5:15.04:181,15,0	1/1:0,4:4:9.03:111,9,0	1/1:0,1:1:2.97:20,3,0	1/1:0,1:1:3.01:38,3,0	1/1:0,4:4:9.03:111,9,0	0/1:1,3:4:4.13:87,0,4	1/1:0,6:6:12:133,12,0	1/1:0,13:13:21.02:242,21,0	1/1:2,2:3:6.02:78,6,0	./.	1/1:0,2:2:6.02:74,6,0	0/1:3,9:12:22.11:31,0,22	1/1:0,1:1:3.01:36,3,0	1/1:0,3:3:9.03:112,9,0	1/1:0,5:5:5.60:60,6,0	1/1:0,4:4:6.02:74,6,0	1/1:1,6:7:18.04:213,18,0	1/1:0,9:9:21.07:259,21,0	1/1:0,4:4:12.04:153,12,0
chr10	177239	.	T	TAC	431.69	PASS	AB=0.826;AC=3;AF=0.054;AN=56;BaseQRankSum=6.719;DP=964;FS=1.966;HRun=0;HaplotypeScore=149.2777;InbreedingCoeff=-0.0716;MQ=58.43;MQ0=10;MQRankSum=-2.343;QD=4.32;ReadPosRankSum=1.104;VQSLOD=3.2181;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:35:79.28:0,79,1130	0/0:14,0:14:33.11:0,33,449	0/0:25,0:13:4.80:0,5,126	0/0:23,0:6:6.02:0,6,74	0/0:28,0:28:63.21:0,63,865	0/0:23,0:22:48.16:0,48,659	0/0:37,0:37:99:0,102,1400	0/0:53,0:52:99:0,135,1801	0/1:38,7:39:99:237,0,695	0/0:48,0:48:99:0,129,1737	0/0:15,0:15:42.14:0,42,577	0/0:57,0:56:99:0,147,2019	0/0:49,0:49:99:0,126,1696	0/0:33,0:33:90.28:0,90,1219	0/0:46,0:46:99:0,132,1797	0/0:43,0:42:99:0,123,1653	0/0:20,0:19:31.89:0,32,412	0/0:26,0:25:60.19:0,60,808	0/0:27,0:19:42.14:0,42,577	0/0:18,0:18:51.17:0,51,701	0/0:92,0:88:99:0,253,3454	0/0:43,0:42:99:0,108,1445	0/0:27,0:26:60.20:0,60,824	0/0:25,0:25:63.13:0,63,848	0/0:27,0:27:75.23:0,75,1013	0/1:38,6:41:99:115,0,1087	0/0:26,2:24:3.83:0,4,618	0/1:7,4:11:99:180,0,224
chr10	177295	.	T	TAC	1662.09	PASS	AB=0.756;AC=4;AF=0.071;AN=56;BaseQRankSum=8.353;DP=1052;FS=0.564;HRun=0;HaplotypeScore=186.6373;InbreedingCoeff=-0.0787;MQ=54.40;MQ0=8;MQRankSum=-5.476;QD=11.70;ReadPosRankSum=1.222;VQSLOD=3.4581;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:32:69.09:0,69,1058	0/0:13,0:12:33.11:0,33,452	0/0:13,0:4:12.04:0,12,161	0/0:28,0:10:19.31:0,19,246	0/0:11,0:11:18.05:0,18,231	0/0:26,0:26:78.25:0,78,1054	0/0:43,0:43:99:0,129,1731	0/0:49,0:47:99:0,105,1415	0/1:31,15:40:99:341,0,599	0/0:42,0:41:99:0,120,1635	0/0:24,0:23:57.16:0,57,778	0/0:62,0:62:99:0,178,2415	0/0:62,0:62:99:0,169,2308	0/0:46,0:46:99:0,129,1753	0/0:70,0:70:99:0,208,2845	0/0:47,0:47:99:0,135,1853	0/0:18,0:17:36.26:0,36,445	0/0:26,0:25:66.21:0,66,892	0/0:25,0:24:72.23:0,72,973	0/0:24,0:24:69.23:0,69,948	0/0:119,0:118:99:0,310,4246	0/0:44,0:44:99:0,108,1428	0/0:25,0:24:57.19:0,57,778	0/0:32,0:32:91.18:0,91,1239	0/0:27,0:27:81.27:0,81,1107	0/1:32,14:43:99:676,0,653	0/1:22,19:37:92.69:667,0,93	0/1:7,2:9:86.95:87,0,110
chr10	177308	.	CATG	C	2716.69	PASS	AB=0.718;AC=7;AF=0.125;AN=56;BaseQRankSum=13.473;DP=1025;FS=0.000;HRun=0;HaplotypeScore=191.0024;InbreedingCoeff=0.1925;MQ=54.12;MQ0=13;MQRankSum=-8.800;QD=17.19;ReadPosRankSum=1.861;VQSLOD=3.4281;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:9,19:27:55.09:756,0,55	0/0:10,0:9:24.03:0,24,407	0/0:12,0:4:11.59:0,12,96	0/0:26,0:9:10.02:0,10,66	0/0:10,0:10:21.07:0,21,445	0/0:28,0:28:84.27:0,84,1854	0/0:42,0:42:99:0,108,1920	0/0:39,0:30:83.85:0,84,806	0/1:24,15:39:51.46:718,0,51	0/0:46,0:43:99:0,117,2386	0/0:22,0:21:44.84:0,45,918	0/0:66,0:66:99:0,190,4184	0/0:61,0:61:99:0,181,3978	0/0:45,0:45:99:0,126,2760	0/0:80,0:80:99:0,241,5223	0/0:49,0:49:99:0,132,2743	0/1:10,8:18:99:328,0,162	0/0:29,0:28:81.28:0,81,1821	0/0:25,0:23:63.13:0,63,1226	0/0:25,0:25:69.17:0,69,1383	0/0:127,0:126:99:0,354,7459	0/0:37,0:37:74.96:0,75,1394	0/0:25,0:23:56.84:0,57,1096	0/0:36,0:36:99:0,105,2340	0/0:27,0:26:69.22:0,69,1500	0/1:27,7:32:99:394,0,405	1/1:12,21:33:22.25:558,22,0	0/1:4,2:6:10.54:98,0,11
chr10	177320	.	CATG	C	1847.29	PASS	AB=0.759;AC=5;AF=0.089;AN=56;BaseQRankSum=11.044;DP=1024;FS=1.841;HRun=0;HaplotypeScore=195.0100;InbreedingCoeff=-0.0994;MQ=53.74;MQ0=19;MQRankSum=-11.147;QD=13.89;ReadPosRankSum=0.035;VQSLOD=3.4953;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:24,1:25:7.52:8,0,923	0/0:10,0:9:27.09:0,27,581	0/0:14,0:3:6.02:0,6,96	0/0:17,0:6:18.05:0,18,274	0/0:14,0:14:33.11:0,33,726	0/0:27,0:27:72.25:0,72,1630	0/0:42,0:42:99:0,117,2601	0/0:49,0:26:75.22:0,75,1557	0/1:23,18:41:99:614,0,373	0/0:47,0:43:99:0,126,2821	0/0:22,0:21:47.92:0,48,1003	0/0:72,0:72:99:0,214,4712	0/0:66,0:66:99:0,193,4328	0/0:44,0:44:99:0,126,2845	0/0:83,0:83:99:0,247,5480	0/0:41,0:41:99:0,111,2464	0/0:21,0:21:51.65:0,52,1130	0/0:31,0:31:93.30:0,93,2040	0/0:24,0:19:54.17:0,54,1165	0/0:25,0:25:75.26:0,75,1623	0/0:130,0:129:99:0,355,7932	0/0:32,0:32:72.02:0,72,1610	0/0:17,0:15:33.11:0,33,717	0/0:38,0:38:99:0,114,2503	0/0:25,0:24:63.21:0,63,1325	0/1:14,16:29:99:754,0,597	0/1:15,17:32:59.33:543,0,59	0/1:4,1:5:36.28:44,0,36
chr10	177344	.	CATG	C	1732.48	PASS	AB=0.786;AC=7;AF=0.125;AN=56;BaseQRankSum=11.144;DP=1056;FS=0.000;HRun=0;HaplotypeScore=202.9722;InbreedingCoeff=0.1518;MQ=53.09;MQ0=20;MQRankSum=-10.818;QD=11.11;ReadPosRankSum=-0.401;VQSLOD=3.1525;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:18,6:24:99:100,0,678	0/0:14,0:12:36.12:0,36,728	0/0:20,0:7:14.94:0,15,238	0/0:17,0:4:1.30:0,1,61	0/0:14,0:14:30.10:0,30,680	0/0:21,0:21:63.22:0,63,1423	0/0:38,0:38:99:0,105,2375	0/0:59,0:35:90.30:0,90,1927	0/1:31,16:46:99:721,0,442	0/0:56,0:51:99:0,148,3308	0/0:19,0:18:36.04:0,36,738	0/0:78,0:78:99:0,226,4944	0/0:65,0:65:99:0,190,4237	0/0:50,0:50:99:0,141,3045	0/0:76,0:76:99:0,220,4639	0/0:43,0:43:99:0,129,2920	0/1:17,2:19:46.03:46,0,783	0/0:31,0:31:90.31:0,90,2037	0/0:25,0:20:54.18:0,54,1177	0/0:22,0:22:63.22:0,63,1366	0/0:138,0:136:99:0,388,8608	0/0:34,0:34:72.23:0,72,1580	0/0:15,0:14:33.11:0,33,744	0/0:40,0:40:99:0,111,2456	0/0:25,0:24:60.20:0,60,1326	0/1:15,12:26:99:498,0,356	0/1:24,9:33:99:246,0,331	1/1:4,2:6:18.06:257,18,0
chr10	177347	.	G	GGTACAC	3041.18	PASS	AB=0.975;AC=6;AF=0.107;AN=56;BaseQRankSum=10.306;DP=1030;FS=0.519;HRun=0;HaplotypeScore=252.0416;InbreedingCoeff=0.2218;MQ=53.10;MQ0=18;MQRankSum=-11.109;QD=23.58;ReadPosRankSum=0.344;VQSLOD=3.0677;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:31.03:0,31,848	0/0:14,0:12:36.12:0,36,780	0/0:20,0:7:15.05:0,15,279	0/0:15,0:3:3.01:0,3,63	0/0:13,0:13:29.62:0,30,768	0/0:22,0:22:66.21:0,66,1559	0/0:35,0:35:99:0,105,2586	0/0:56,0:32:96.30:0,96,2060	0/1:46,0:45:99:1250,0,344	0/0:55,0:50:99:0,148,3659	0/0:18,0:17:36.11:0,36,789	0/0:77,0:77:99:0,229,5523	0/0:64,0:64:99:0,193,4749	0/0:48,0:48:99:0,141,3310	0/0:75,0:75:99:0,223,5182	0/0:44,0:44:99:0,132,3307	0/1:16,2:18:99:294,0,665	0/0:30,0:30:90.31:0,90,2266	0/0:26,0:22:63.17:0,63,1378	0/0:21,0:21:63.22:0,63,1492	0/0:138,0:136:99:0,397,9465	0/0:31,0:31:72.23:0,72,1689	0/0:16,0:15:36.10:0,36,845	0/0:38,0:38:99:0,114,2741	0/0:22,0:21:60.21:0,60,1419	0/1:27,0:26:99:620,0,217	0/1:32,0:32:99:551,0,146	1/1:4,2:6:18.06:455,18,0
chr10	177356	.	CATG	C	1375.04	PASS	AB=0.772;AC=6;AF=0.107;AN=56;BaseQRankSum=10.119;DP=1035;FS=0.000;HRun=0;HaplotypeScore=196.1574;InbreedingCoeff=0.2277;MQ=53.50;MQ0=12;MQRankSum=-9.529;QD=11.00;ReadPosRankSum=-2.262;VQSLOD=2.9479;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:20.20:0,20,851	0/0:12,0:11:27.09:0,27,601	0/0:21,0:7:20.99:0,21,263	0/0:16,0:6:6.02:0,6,132	0/0:14,0:14:33.11:0,33,743	0/0:24,0:24:66.23:0,66,1466	0/0:38,0:38:99:0,108,2351	0/0:53,0:35:99:0,105,1874	0/1:29,18:46:99:679,0,561	0/0:59,0:54:99:0,163,3545	0/0:15,0:14:24.01:0,24,499	0/0:74,0:74:99:0,220,4904	0/0:65,0:65:99:0,187,3987	0/0:48,0:48:99:0,135,2943	0/0:71,0:71:99:0,202,4312	0/0:45,0:45:99:0,129,2792	0/1:14,3:16:99:147,0,255	0/0:32,0:32:87.28:0,87,1927	0/0:25,0:22:63.20:0,63,1172	0/0:22,0:22:66.18:0,66,1440	0/0:139,0:137:99:0,382,8286	0/0:31,0:31:63.21:0,63,1394	0/0:17,0:16:39.13:0,39,875	0/0:41,0:41:99:0,123,2736	0/0:26,0:24:63.20:0,63,1363	0/1:18,7:24:99:283,0,641	0/1:19,11:30:99:151,0,380	1/1:1,5:6:15.05:243,15,0
chr10	177377	.	CATG	C	1489.30	PASS	AB=0.781;AC=7;AF=0.125;AN=56;BaseQRankSum=10.505;DP=1016;FS=5.509;HRun=0;HaplotypeScore=200.5844;InbreedingCoeff=0.1371;MQ=56.53;MQ0=2;MQRankSum=-10.106;QD=9.93;ReadPosRankSum=2.298;VQSLOD=3.1210;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:17,4:21:63.91:64,0,711	0/0:12,0:11:27.09:0,27,609	0/0:18,0:10:23.25:0,23,308	0/0:17,0:10:23.88:0,24,324	0/0:17,0:17:45.15:0,45,988	0/0:25,0:25:72.25:0,72,1575	0/0:38,0:38:99:0,105,2331	0/0:43,0:43:99:0,114,2540	0/1:24,21:42:99:596,0,386	0/0:50,0:50:99:0,147,3260	0/0:16,0:16:36.05:0,36,737	0/0:70,0:70:99:0,202,4505	0/0:60,0:60:99:0,160,3500	0/0:61,0:61:99:0,181,4047	0/0:65,0:65:99:0,196,4263	0/0:49,0:49:99:0,144,3191	0/1:19,2:20:58.18:58,0,330	0/0:30,0:30:90.31:0,90,2029	0/0:24,0:23:63.22:0,63,1377	0/0:20,0:20:57.15:0,57,1223	0/0:142,1:141:99:0,394,8701	0/0:23,0:23:63.22:0,63,1382	0/0:23,0:22:60.19:0,60,1286	0/0:36,0:36:99:0,102,2262	0/0:26,0:24:63.20:0,63,1427	0/1:18,9:27:99:386,0,480	0/1:19,12:31:99:492,0,290	1/1:5,0:5:6.94:24,7,0
chr10	177398	.	C	CATG	545.33	PASS	AB=0.930;AC=4;AF=0.071;AN=56;BaseQRankSum=8.457;DP=1034;FS=2.483;HRun=0;HaplotypeScore=193.7775;InbreedingCoeff=-0.0723;MQ=57.16;MQ0=8;MQRankSum=-6.297;QD=5.51;ReadPosRankSum=-0.625;VQSLOD=2.8990;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:26:51.09:0,51,828	0/0:13,0:12:33.11:0,33,550	0/0:17,0:5:15.05:0,15,221	0/0:17,0:10:14.10:0,14,122	0/0:27,0:27:64.90:0,65,1046	0/0:24,0:24:69.23:0,69,1125	0/0:41,0:41:99:0,114,1787	0/0:41,0:41:99:0,102,1671	0/1:47,0:39:99:283,0,426	0/0:60,0:60:99:0,172,2775	0/0:20,0:20:48.16:0,48,784	0/0:68,0:68:99:0,190,3086	0/0:55,0:55:99:0,144,2372	0/0:63,0:63:99:0,181,2992	0/0:69,0:69:99:0,196,3159	0/0:53,0:53:99:0,150,2469	0/1:14,9:22:99:343,0,210	0/0:26,0:25:69.21:0,69,1122	0/0:28,0:25:63.07:0,63,976	0/0:22,0:22:57.19:0,57,922	0/0:129,0:127:99:0,356,5772	0/0:23,0:23:60.21:0,60,999	0/0:21,0:21:54.17:0,54,862	0/0:36,0:36:99:0,99,1589	0/0:31,0:29:73.67:0,74,1206	0/0:24,0:24:10.68:0,11,536	0/1:27,0:27:3.20:3,0,275	0/1:2,0:2:17.83:18,0,29
chr10	177401	.	GGTACAC	G	1215.40	PASS	AB=0.867;AC=6;AF=0.107;AN=56;BaseQRankSum=7.356;DP=1029;FS=1.487;HRun=0;HaplotypeScore=247.1066;InbreedingCoeff=0.1870;MQ=56.99;MQ0=8;MQRankSum=-6.692;QD=9.80;ReadPosRankSum=-2.210;VQSLOD=2.4029;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:26:52.91:0,53,1083	0/0:13,0:12:33.11:0,33,1036	0/0:18,0:6:15.05:0,15,300	0/0:17,0:10:13.22:0,13,144	0/0:28,0:28:72.09:0,72,2060	0/0:25,0:25:75.25:0,75,2296	0/0:39,0:39:99:0,114,3045	0/0:39,0:39:99:0,117,3075	0/1:41,7:40:99:630,0,279	0/0:61,0:61:99:0,184,5369	0/0:20,0:20:53.97:0,54,1574	0/0:68,0:68:99:0,202,5923	0/0:50,0:50:99:0,147,4584	0/0:61,0:61:99:0,184,6085	0/0:67,0:67:99:0,202,6183	0/0:53,0:53:99:0,156,4917	0/1:22,1:22:65.89:66,0,477	0/0:26,0:25:75.24:0,75,2176	0/0:27,0:25:69.10:0,69,1776	0/0:22,0:22:57.19:0,57,1606	0/0:134,0:132:99:0,385,11232	0/0:22,0:22:63.22:0,63,2150	0/0:20,0:20:54.18:0,54,1667	0/0:34,0:34:99:0,99,2999	0/0:31,0:29:74.49:0,74,2372	0/1:21,3:24:99:326,0,446	0/1:18,9:27:99:188,0,189	1/1:1,1:2:6.02:129,6,0
chr10	177411	.	A	ATGG	2741.79	PASS	AB=0.834;AC=6;AF=0.107;AN=56;BaseQRankSum=10.137;DP=1062;FS=7.013;HRun=0;HaplotypeScore=194.0858;InbreedingCoeff=0.2763;MQ=55.77;MQ0=8;MQRankSum=-10.667;QD=19.58;ReadPosRankSum=-3.705;VQSLOD=1.9444;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:31:45.97:0,46,643	0/0:13,0:12:33.10:0,33,553	0/0:18,0:6:9.03:0,9,137	0/0:18,0:6:11.63:0,12,151	0/0:32,0:32:77.97:0,78,1302	0/0:25,0:25:75.22:0,75,1264	0/0:36,0:36:99:0,102,1792	0/0:43,0:43:99:0,123,2077	0/1:35,15:42:39.12:1172,0,39	0/0:64,0:64:99:0,178,3097	0/0:22,0:22:59.92:0,60,967	0/0:66,0:66:99:0,192,3295	0/0:49,0:49:99:0,144,2477	0/0:69,0:69:99:0,205,3472	0/0:66,0:66:99:0,199,3378	0/0:54,0:54:99:0,151,2611	0/1:20,2:21:99:106,0,174	0/0:25,0:24:66.16:0,66,1083	0/0:27,0:23:66.22:0,66,1129	0/0:22,0:22:54.10:0,54,856	0/0:134,1:133:99:0,379,6334	0/0:23,0:23:69.21:0,69,1160	0/0:21,0:21:54.19:0,54,952	0/0:30,0:30:84.29:0,84,1473	0/0:32,0:31:79.25:0,79,1334	0/1:21,10:32:99:791,0,167	0/1:26,3:29:5.04:626,0,5	1/1:1,5:7:9.03:172,9,0
chr10	177439	.	T	TAC	122.18	PASS	AB=0.893;AC=4;AF=0.071;AN=56;BaseQRankSum=6.014;DP=1087;FS=12.527;HRun=0;HaplotypeScore=169.9905;InbreedingCoeff=0.3657;MQ=56.48;MQ0=10;MQRankSum=-3.578;QD=1.36;ReadPosRankSum=-3.479;VQSLOD=0.8289;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:34:45.68:0,46,563	0/0:16,0:16:45.15:0,45,618	1/1:16,0:4:5.62:28,6,0	0/1:27,0:9:12.61:13,0,151	0/0:33,0:33:90.30:0,90,1230	0/0:26,0:26:69.21:0,69,929	0/0:36,0:36:99:0,102,1368	0/0:48,0:48:99:0,126,1699	0/1:36,10:38:99:184,0,534	0/0:67,0:65:99:0,171,2308	0/0:24,0:24:60.19:0,60,808	0/0:61,0:61:99:0,172,2333	0/0:41,0:41:99:0,123,1682	0/0:70,0:70:99:0,199,2717	0/0:66,0:66:99:0,187,2520	0/0:52,0:52:99:0,149,1990	0/0:24,0:23:41.79:0,42,513	0/0:20,0:19:51.17:0,51,701	0/0:21,0:20:48.16:0,48,657	0/0:29,0:29:72.24:0,72,989	0/0:140,0:139:99:0,388,5276	0/0:30,0:30:78.23:0,78,1034	0/0:22,0:22:57.19:0,57,783	0/0:30,0:30:75.23:0,75,1014	0/0:25,0:24:49.51:0,50,657	0/0:37,0:36:76.70:0,77,1032	0/0:34,0:33:69.22:0,69,819	0/0:10,0:10:9.47:0,9,198
chr10	177458	.	ATACACATGGTACACATGG	A	41.86	PASS	AB=0.632;AC=1;AF=0.018;AN=56;BaseQRankSum=2.330;DP=1090;FS=0.000;HRun=0;HaplotypeScore=486.2358;InbreedingCoeff=-0.0220;MQ=56.77;MQ0=10;MQRankSum=-2.025;QD=1.16;ReadPosRankSum=-0.600;VQSLOD=0.6814;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:15,21:35:99:116,0,133	0/0:18,0:18:48.16:0,48,2326	0/0:15,0:5:11.62:0,12,193	0/0:26,0:10:8.13:0,8,156	0/0:38,0:38:87.24:0,87,4147	0/0:26,0:26:72.25:0,72,3334	0/0:33,0:33:63.20:0,63,2667	0/0:44,0:44:90.29:0,90,3462	0/0:40,0:33:81.08:0,81,1809	0/0:75,0:74:99:0,178,7889	0/0:24,0:24:54.19:0,54,2654	0/0:61,0:61:99:0,148,7677	0/0:51,0:51:99:0,126,5949	0/0:64,0:64:99:0,129,6772	0/0:61,0:61:99:0,144,7308	0/0:55,0:55:99:0,108,5446	0/0:27,0:27:48.51:0,49,1761	0/0:19,0:18:36.12:0,36,1935	0/0:28,0:24:42.12:0,42,2026	0/0:30,0:30:75.26:0,75,3675	0/0:136,0:136:99:0,310,15431	0/0:36,0:36:87.28:0,87,3676	0/0:21,0:21:54.14:0,54,2345	0/0:24,0:24:57.20:0,57,3073	0/0:24,0:24:49.41:0,49,2014	0/0:33,0:33:69.13:0,69,3125	0/0:34,0:33:62.79:0,63,2912	0/0:11,0:11:21.07:0,21,938
chr10	178689	.	GAC	G	1128.85	PASS	AB=0.859;AC=21;AF=0.389;AN=54;BaseQRankSum=6.999;DP=564;FS=8.250;HRun=0;HaplotypeScore=72.8548;InbreedingCoeff=-0.1675;MQ=64.95;MQ0=13;MQRankSum=-0.809;QD=3.22;ReadPosRankSum=0.873;VQSLOD=1.0556;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:18,17:38:35.60:340,36,0	0/1:12,3:16:82.74:83,0,362	./.	0/0:30,0:24:3.01:0,3,33	0/0:12,0:12:9.02:0,9,115	0/0:25,6:31:9.08:0,9,548	0/1:17,3:20:42.05:42,0,224	0/1:22,0:20:33.05:77,0,33	1/1:12,9:21:23.93:246,24,0	0/1:17,1:16:4.74:5,0,317	0/0:17,0:16:21.07:0,21,310	0/1:22,2:22:27.15:27,0,432	0/1:11,1:12:11.98:12,0,246	0/1:13,3:16:15:15,0,204	0/1:13,4:18:66.11:66,0,288	0/0:25,0:25:14.74:0,15,475	0/0:15,0:19:21:0,21,186	0/0:20,0:21:18.96:0,19,425	0/0:14,0:12:6.02:0,6,76	0/0:18,0:18:21.06:0,21,295	0/1:21,3:23:82.92:83,0,392	0/1:15,4:19:42.05:42,0,239	0/1:15,1:17:2.97:3,0,352	0/1:25,4:28:51.03:51,0,535	0/1:12,3:15:8.97:9,0,281	0/1:11,0:18:50.27:50,0,70	1/1:11,0:20:25.57:126,26,0	0/1:2,0:4:14.83:19,0,15
chr10	180805	.	TGTGTGTGTGTGC	T	176.12	PASS	AB=1.000;AC=7;AF=0.130;AN=54;BaseQRankSum=1.138;DP=255;FS=27.996;HRun=0;HaplotypeScore=62.1979;InbreedingCoeff=0.4330;MQ=56.98;MQ0=36;MQRankSum=-1.789;QD=4.19;ReadPosRankSum=-0.797;VQSLOD=0.0628;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:7:5.99:49,6,0	0/0:1,0:1:0:0,0,0	0/0:31,0:12:13.99:0,14,142	0/0:32,0:7:0.76:0,1,34	0/0:7,0:7:16.84:0,17,473	0/0:7,0:7:15.05:0,15,600	0/0:6,0:5:9.02:0,9,360	0/0:14,0:13:27.31:0,27,189	1/1:0,5:5:3.01:107,3,0	0/0:3,0:2:3.48:0,3,82	0/0:9,0:9:24.02:0,24,609	0/0:7,0:7:14.69:0,15,300	0/0:7,0:5:9.39:0,9,206	0/0:5,0:4:3.47:0,3,26	0/0:5,0:5:8.98:0,9,73	0/0:6,0:6:9.49:0,9,270	0/1:18,0:11:3.35:3,0,202	0/0:20,0:18:39.59:0,40,761	0/0:3,0:2:6.02:0,6,113	0/0:4,0:3:3.01:0,3,157	0/0:9,0:7:11.94:0,12,142	0/0:3,0:2:3:0,3,25	./.	0/0:16,0:14:23.88:0,24,610	0/0:4,0:2:6.02:0,6,245	0/0:6,0:5:1.25:0,1,3	0/0:7,0:7:1.36:0,1,2	1/1:8,0:7:9.05:131,9,0
chr10	182681	.	T	TGGAATCCA	15826.55	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-3.625;DP=709;FS=2.495;HRun=0;HaplotypeScore=170.6593;InbreedingCoeff=0.9983;MQ=82.91;MQ0=0;MQRankSum=-17.341;QD=96.50;ReadPosRankSum=-2.530;VQSLOD=4.9406;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,33:49:99:4365,114,0	0/0:12,0:12:36.10:0,36,924	0/0:26,0:26:75.26:0,75,2043	0/0:31,0:31:83.15:0,83,2170	0/0:16,0:16:48.16:0,48,1406	0/0:26,0:26:78.27:0,78,2241	0/0:17,0:17:51.15:0,51,1427	0/0:40,0:40:99:0,111,3143	1/1:11,19:33:90.31:3547,90,0	0/0:30,0:29:87.29:0,87,2341	0/0:16,0:16:48.16:0,48,1391	0/0:27,0:27:78.25:0,78,2165	0/0:23,0:23:63.20:0,63,1664	0/0:29,0:29:83.95:0,84,2293	0/0:24,0:24:69.22:0,69,1876	0/0:16,0:16:45.15:0,45,1242	1/1:4,15:23:45.15:1661,45,0	0/0:18,0:18:54.16:0,54,1498	0/0:16,0:16:45.15:0,45,1265	0/0:26,0:26:75.22:0,75,2009	0/0:42,0:42:99:0,126,3533	0/0:28,0:28:72.25:0,72,2104	0/0:13,0:13:39.13:0,39,1088	0/0:44,0:44:99:0,132,3770	0/0:25,0:25:75.26:0,75,2187	1/1:6,18:27:72.20:2972,72,0	1/1:8,15:24:66.23:2704,66,0	1/1:3,3:8:18.06:577,18,0
chr10	183125	.	AT	A	2754.65	PASS	AB=0.909;AC=13;AF=0.232;AN=56;BaseQRankSum=12.638;DP=563;FS=1.251;HRun=10;HaplotypeScore=61.4944;InbreedingCoeff=0.8989;MQ=72.77;MQ0=0;MQRankSum=-0.226;QD=19.40;ReadPosRankSum=3.069;VQSLOD=4.6448;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,21:22:62.99:547,63,0	0/0:5,0:6:17.87:0,18,172	0/0:19,0:18:41.88:0,42,404	0/0:6,0:4:9.02:0,9,96	0/0:26,0:26:75.19:0,75,821	0/0:29,0:29:72.18:0,72,788	0/0:15,0:15:24.05:0,24,255	0/0:33,0:33:87.22:0,87,948	1/1:2,13:15:38.99:339,39,0	0/0:29,0:29:72.17:0,72,772	0/0:24,0:24:63.16:0,63,687	0/0:11,0:11:27.07:0,27,299	0/0:20,0:20:51.12:0,51,554	0/0:15,0:15:42.07:0,42,445	0/0:21,0:21:37.12:0,37,629	0/0:19,0:19:51.08:0,51,542	1/1:1,30:31:86.97:755,87,0	0/0:21,0:21:60.12:0,60,649	0/0:24,0:24:72.16:0,72,784	0/0:27,0:27:78.20:0,78,854	0/0:10,0:10:27.07:0,27,299	0/0:25,0:25:66.18:0,66,730	0/0:20,0:21:59.99:0,60,642	0/1:9,1:10:8.06:8,0,125	0/0:19,0:19:57.15:0,57,631	1/1:6,18:24:20.78:410,21,0	1/1:3,15:18:38.99:339,39,0	1/1:1,21:22:62.99:547,63,0
chr10	183566	.	GAATAAATAAATAAATA	G	2992.52	PASS	AB=0.889;AC=11;AF=0.262;AN=42;BaseQRankSum=4.926;DP=300;FS=10.284;HRun=0;HaplotypeScore=126.5055;InbreedingCoeff=0.5787;MQ=51.16;MQ0=7;MQRankSum=-6.126;QD=30.85;ReadPosRankSum=0.823;VQSLOD=2.2587;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:21,0:24:99:370,0,651	./.	./.	./.	0/0:6,0:12:18.06:0,18,877	0/0:11,0:11:15.05:0,15,865	./.	0/0:29,0:22:27.01:0,27,505	1/1:6,0:6:5.95:53,6,0	0/0:12,0:11:12.04:0,12,913	0/0:5,0:5:6.02:0,6,157	0/0:5,0:5:3.01:0,3,102	./.	./.	0/0:6,0:6:3.01:0,3,112	0/0:11,0:11:15.05:0,15,871	1/1:10,0:19:2.97:112,3,0	0/0:32,0:32:54.17:0,54,3036	0/0:15,0:16:21.07:0,21,1069	0/0:14,0:13:6.02:0,6,369	0/0:3,0:3:3.01:0,3,228	0/0:4,0:4:3.01:0,3,49	./.	0/0:2,0:2:6.02:0,6,256	0/0:10,0:10:12.04:0,12,690	1/1:11,4:15:23.91:897,24,0	1/1:16,7:23:30.10:1160,30,0	1/1:7,3:9:15.05:545,15,0
chr10	183612	.	TA	T	1094.09	PASS	AB=0.825;AC=10;AF=0.179;AN=56;BaseQRankSum=8.999;DP=311;FS=0.549;HRun=11;HaplotypeScore=59.7104;InbreedingCoeff=0.4550;MQ=69.96;MQ0=5;MQRankSum=-3.445;QD=13.68;ReadPosRankSum=2.430;VQSLOD=3.8693;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,1:32:75.12:0,75,782	0/0:3,0:3:9.02:0,9,96	0/0:24,0:14:12.42:0,12,173	0/0:15,0:11:5.46:0,5,66	0/0:9,0:9:18.05:0,18,192	0/0:13,0:14:38.93:0,39,398	0/0:5,0:5:12.03:0,12,128	0/0:28,2:29:27.98:0,28,640	0/1:2,7:9:7.49:148,0,7	0/0:14,0:14:42.11:0,42,448	0/0:6,0:6:18.04:0,18,190	0/1:5,0:5:5.13:5,0,113	0/1:3,1:4:12.61:13,0,83	0/0:4,0:4:12.03:0,12,128	0/0:3,0:3:9.02:0,9,96	0/0:6,0:6:15.04:0,15,160	0/1:14,1:15:6.60:7,0,141	0/0:22,2:24:19.90:0,20,622	0/0:15,0:15:42.57:0,43,442	0/0:3,0:3:9.02:0,9,96	0/0:5,0:5:9.01:0,9,88	0/0:2,0:2:6.02:0,6,64	0/0:1,0:1:3.01:0,3,32	0/0:6,0:6:18.05:0,18,192	0/0:6,0:7:14.91:0,15,143	1/1:2,12:14:40.74:320,41,0	1/1:1,19:20:59.88:486,60,0	1/1:1,12:12:32.96:271,33,0
chr10	184528	.	GA	G	372.12	PASS	AB=0.761;AC=8;AF=0.154;AN=52;BaseQRankSum=5.812;DP=327;FS=13.255;HRun=7;HaplotypeScore=85.6736;InbreedingCoeff=0.6400;MQ=52.46;MQ0=7;MQRankSum=-3.140;QD=6.00;ReadPosRankSum=-0.333;VQSLOD=0.0367;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:5:15.05:0,15,189	0/0:9,0:9:27.08:0,27,327	0/0:33,1:18:37.93:0,38,530	0/1:34,0:16:5.55:6,0,253	0/0:19,0:19:51.12:0,51,618	0/0:19,0:18:54.13:0,54,659	0/0:11,0:11:27.09:0,27,340	0/0:2,0:2:6.01:0,6,64	1/1:1,5:6:15.03:154,15,0	0/0:17,0:17:42.13:0,42,527	0/0:10,0:10:24.03:0,24,272	0/0:11,0:11:33.06:0,33,397	0/0:4,0:4:12.04:0,12,151	0/0:12,0:12:36.06:0,36,422	0/0:7,0:7:21.02:0,21,246	0/0:11,1:12:5.47:0,5,384	./.	0/0:10,0:10:27.03:0,27,318	0/0:11,0:9:24.06:0,24,279	0/0:17,0:17:51.15:0,51,628	./.	0/0:23,0:23:63.17:0,63,775	0/0:7,0:7:15.05:0,15,184	0/0:12,0:11:21.07:0,21,264	0/0:11,0:10:27.08:0,27,327	0/1:3,5:7:22.71:108,0,23	1/1:1,3:4:10.58:95,11,0	1/1:0,5:5:15.03:151,15,0
chr10	184575	.	A	AG	280.27	PASS	AB=0.826;AC=5;AF=0.089;AN=56;BaseQRankSum=6.513;DP=521;FS=21.769;HRun=1;HaplotypeScore=121.0428;InbreedingCoeff=-0.0654;MQ=48.93;MQ0=24;MQRankSum=-5.240;QD=6.09;ReadPosRankSum=1.612;VQSLOD=-0.6866;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:16.60:0,17,208	0/0:12,0:12:33.03:0,33,395	0/0:61,0:18:7.27:0,7,148	0/0:97,0:24:29.03:0,29,377	0/0:27,0:27:78.21:0,78,985	0/0:25,0:24:69.16:0,69,871	0/0:13,0:13:28.12:0,28,349	0/0:12,0:12:36.11:0,36,456	0/1:7,6:13:18.97:161,0,19	0/0:29,0:29:82.07:0,82,973	0/0:15,0:15:36.08:0,36,414	0/0:11,0:11:33.11:0,33,426	0/0:8,0:8:24.08:0,24,311	0/0:15,0:15:45.09:0,45,562	0/0:12,0:12:36.12:0,36,466	0/1:7,1:8:21.74:22,0,212	0/1:5,0:4:13.90:14,0,46	0/0:18,0:18:54.13:0,54,667	0/0:11,0:9:27.08:0,27,329	0/0:20,0:20:51.42:0,51,610	0/0:1,0:1:3.01:0,3,39	0/0:25,0:25:75.24:0,75,970	0/0:10,0:10:26.48:0,26,286	0/0:18,0:17:51.17:0,51,660	0/0:18,0:17:44.17:0,44,539	0/1:6,1:7:20.05:20,0,65	0/1:7,6:12:9.33:179,0,9	0/0:6,0:6:13.74:0,14,65
chr10	184584	.	A	AG	215.35	PASS	AB=0.845;AC=5;AF=0.089;AN=56;BaseQRankSum=6.496;DP=531;FS=11.417;HRun=1;HaplotypeScore=91.8160;InbreedingCoeff=0.1349;MQ=47.52;MQ0=27;MQRankSum=-3.732;QD=5.52;ReadPosRankSum=-0.061;VQSLOD=-0.6900;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:22.41:0,22,253	0/0:13,0:13:33.95:0,34,411	0/0:57,1:12:7.91:0,8,120	0/0:77,0:18:24.45:0,24,299	0/0:33,0:33:93.86:0,94,1140	0/0:25,0:25:69.10:0,69,852	0/0:12,0:12:32.91:0,33,363	0/0:15,0:14:39.12:0,39,492	0/1:12,1:13:49.49:49,0,174	0/0:29,0:28:78.56:0,79,928	0/0:14,0:13:32.16:0,32,373	0/0:14,0:14:39.12:0,39,492	0/0:8,0:8:24.02:0,24,291	0/0:14,0:14:39.07:0,39,485	0/0:15,0:15:38.10:0,38,452	0/0:7,0:7:1.18:0,1,213	1/1:2,3:4:2.04:64,2,0	0/0:20,0:20:57.19:0,57,739	0/0:11,0:10:29.12:0,29,356	0/0:23,0:20:51.11:0,51,607	0/0:3,0:3:3.01:0,3,39	0/0:28,0:28:81.18:0,81,1014	0/0:12,0:12:29.74:0,30,313	0/0:19,1:18:54.10:0,54,662	0/0:22,0:20:43.70:0,44,618	0/1:8,1:9:60.38:60,0,132	0/1:7,5:11:42.43:152,0,42	0/0:6,0:6:15.05:0,15,182
chr10	184601	.	A	AG	473.55	PASS	AB=0.851;AC=13;AF=0.232;AN=56;BaseQRankSum=6.046;DP=526;FS=22.584;HRun=0;HaplotypeScore=76.0414;InbreedingCoeff=-0.1846;MQ=46.01;MQ0=43;MQRankSum=-7.683;QD=2.80;ReadPosRankSum=-3.690;VQSLOD=0.3292;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:20.83:0,21,249	0/0:14,0:14:34.25:0,34,498	0/0:41,0:3:6.02:0,6,84	0/0:51,0:10:8.97:0,9,86	0/0:34,3:37:50.53:0,51,1068	0/0:21,0:23:56.18:0,56,736	0/0:15,0:12:35.10:0,35,437	0/0:17,0:12:27.38:0,27,411	0/0:12,0:12:23.88:0,24,167	0/0:29,0:27:60.84:0,61,951	0/0:16,0:15:40.22:0,40,555	0/1:10,0:10:16.73:17,0,306	0/1:7,4:11:99:145,0,220	0/1:13,4:17:27.40:27,0,412	0/1:15,4:18:35.28:35,0,419	0/1:4,3:6:35.89:36,0,113	1/1:5,2:4:3.44:34,3,0	0/0:20,0:22:49.08:0,49,651	0/1:14,2:11:47.25:47,0,288	0/1:22,2:21:62.64:63,0,486	0/0:3,1:5:2.67:0,3,110	0/0:30,0:31:85.08:0,85,1099	0/0:12,0:12:6.02:0,6,254	0/0:17,0:17:51.08:0,51,638	0/1:21,0:23:42.95:43,0,482	0/1:10,2:12:82.35:83,0,82	0/1:13,1:12:19.60:20,0,157	0/1:6,2:8:65.08:75,0,65
chr10	184604	.	GA	G	188.84	PASS	AB=0.904;AC=4;AF=0.071;AN=56;BaseQRankSum=6.359;DP=506;FS=10.871;HRun=4;HaplotypeScore=67.0605;InbreedingCoeff=-0.0815;MQ=46.67;MQ0=43;MQRankSum=-3.356;QD=4.02;ReadPosRankSum=1.751;VQSLOD=-0.6145;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:7,0:9:31.71:32,0,49	0/0:14,0:14:39.10:0,39,522	0/0:39,0:3:6.01:0,6,67	0/0:42,0:6:5.95:0,6,54	0/0:36,0:36:99:0,101,1404	0/0:24,0:23:51.17:0,51,686	0/0:15,0:12:31.41:0,31,436	0/0:16,0:11:32.10:0,32,380	0/1:7,4:11:21.43:171,0,21	0/0:28,0:25:75.15:0,75,990	0/0:16,0:15:42.14:0,42,577	0/0:11,0:11:33.11:0,33,446	0/0:11,0:11:30.01:0,30,353	0/0:17,0:17:43.02:0,43,558	0/0:20,0:19:45.10:0,45,587	0/0:7,0:6:12.04:0,12,167	0/0:9,0:6:17.67:0,18,136	0/0:24,0:22:52.92:0,53,652	0/0:16,0:10:30.10:0,30,403	0/0:20,0:17:45.08:0,45,588	0/0:5,0:5:11.77:0,12,128	0/0:31,0:30:82.29:0,82,1067	0/0:12,0:12:24.01:0,24,299	0/0:19,0:17:45.24:0,45,540	0/0:19,0:18:45.15:0,45,604	0/1:12,0:12:5.61:6,0,228	0/1:13,2:13:61.60:84,0,62	0/0:8,0:8:13.08:0,13,144
chr10	184609	.	AG	A	112.03	PASS	AB=0.865;AC=3;AF=0.054;AN=56;BaseQRankSum=4.770;DP=501;FS=1.323;HRun=1;HaplotypeScore=65.5173;InbreedingCoeff=-0.0631;MQ=47.12;MQ0=45;MQRankSum=-3.505;QD=2.87;ReadPosRankSum=-0.979;VQSLOD=-0.7442;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:9,2:11:58.71:59,0,87	0/0:13,0:13:36.12:0,36,528	0/0:34,0:2:3.01:0,3,38	0/0:33,0:6:5.74:0,6,38	0/0:36,0:36:99:0,102,1497	0/0:21,0:20:48.14:0,48,662	0/0:16,0:11:33.09:0,33,432	0/0:15,0:10:30.07:0,30,406	0/0:12,0:12:8.21:0,8,226	0/0:28,0:25:75.24:0,75,1051	0/0:16,0:15:42.14:0,42,617	0/0:13,0:13:39.13:0,39,563	0/0:11,0:11:30.10:0,30,439	0/0:18,0:18:45.03:0,45,604	0/0:21,0:20:51.10:0,51,728	0/0:11,0:9:17.98:0,18,219	0/0:10,0:7:19.87:0,20,237	0/0:24,0:22:37.49:0,37,644	0/0:15,0:9:27.08:0,27,374	0/0:20,0:17:48.15:0,48,677	0/0:6,0:5:12.04:0,12,167	0/0:30,0:29:85.67:0,86,1162	0/0:13,0:13:33.02:0,33,434	0/0:18,0:16:36.76:0,37,448	0/0:20,0:18:45.15:0,45,644	0/1:13,0:13:1.01:1,0,454	0/1:10,5:13:99:141,0,148	0/0:8,0:8:21.07:0,21,314
chr10	184803	.	CTTTAGATTTTTGTTAATCTTGGGATTCCATTATCATCAAATCAGTGGTGG	C	1053.05	PASS	AB=0.600;AC=3;AF=0.058;AN=52;BaseQRankSum=1.710;DP=500;FS=0.000;HRun=0;HaplotypeScore=595.8782;InbreedingCoeff=0.5465;MQ=58.65;MQ0=0;MQRankSum=-3.193;QD=131.63;ReadPosRankSum=1.176;VQSLOD=0.3166;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:42.14:0,42,6536	0/0:13,0:13:39.13:0,39,6479	0/0:16,0:13:39.13:0,39,2822	0/0:17,0:12:33.11:0,33,2222	0/0:11,0:11:33.11:0,33,5901	0/0:33,0:31:93.32:0,93,15670	0/0:24,0:24:72.25:0,72,8508	0/0:34,0:34:96.32:0,96,8473	1/1:0,5:5:6.02:769,6,0	0/0:30,0:30:90.30:0,90,12754	0/0:25,0:25:71.61:0,72,9833	0/0:26,0:26:78.25:0,78,12017	0/0:18,0:18:54.17:0,54,7389	0/0:15,0:15:45.15:0,45,6377	0/0:22,0:21:60.21:0,60,8346	0/0:17,0:16:45.15:0,45,7090	0/0:14,0:14:42.14:0,42,5679	0/0:10,0:10:30.10:0,30,5037	0/0:19,0:19:57.18:0,57,5654	0/0:17,0:17:51.18:0,51,8340	0/0:24,0:24:72.25:0,72,10489	0/0:26,0:26:78.27:0,78,13591	0/0:19,0:19:57.20:0,57,8862	0/0:25,0:23:75.26:0,75,10739	0/0:22,0:22:66.22:0,66,9497	0/1:1,2:3:99:378,0,583	./.	./.
chr10	185136	.	A	AT	2683.23	PASS	AC=8;AF=0.148;AN=54;BaseQRankSum=12.542;DP=583;FS=0.917;HRun=1;HaplotypeScore=68.5318;InbreedingCoeff=0.9998;MQ=90.93;MQ0=0;MQRankSum=-1.904;QD=28.85;ReadPosRankSum=0.846;VQSLOD=3.4086;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:57.18:0,57,735	0/0:13,0:13:36.09:0,36,439	0/0:32,0:32:75.22:0,75,952	0/0:26,0:26:43.05:0,43,544	0/0:19,0:19:57.17:0,57,724	0/0:29,0:29:84.24:0,84,1060	0/0:14,0:14:42.14:0,42,545	0/0:33,0:33:90.28:0,90,1145	1/1:2,17:19:55.04:635,55,0	0/0:34,0:34:96.30:0,96,1226	0/0:25,0:25:75.24:0,75,961	0/0:20,0:20:57.19:0,57,740	0/0:11,0:11:33.11:0,33,423	0/0:12,0:12:36.10:0,36,451	0/0:25,0:25:72.23:0,72,935	0/0:14,0:14:42.14:0,42,545	1/1:0,20:20:51.15:613,51,0	0/0:25,0:25:72.23:0,72,933	0/0:18,0:18:51.16:0,51,651	0/0:24,0:24:66.21:0,66,854	0/0:16,0:16:48.13:0,48,605	0/0:21,0:21:60.19:0,60,778	0/0:23,0:23:66.20:0,66,842	0/0:13,0:13:36.10:0,36,450	0/0:24,0:24:72.23:0,72,934	1/1:2,22:24:59.62:689,60,0	1/1:2,28:30:75.23:906,75,0	./.
chr10	185647	.	A	ATG	2098.23	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=9.476;DP=341;FS=3.017;HRun=0;HaplotypeScore=56.0332;InbreedingCoeff=0.8405;MQ=67.85;MQ0=2;MQRankSum=-3.374;QD=29.55;ReadPosRankSum=3.057;VQSLOD=5.1652;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:7:9.41:0,9,67	0/0:13,0:13:39.02:0,39,479	1/1:3,0:2:2.04:6,2,0	0/0:12,0:9:18.53:0,19,159	0/0:22,0:22:60.05:0,60,790	0/0:13,0:13:39.09:0,39,531	0/0:16,0:16:42.03:0,42,543	0/0:34,0:34:98.78:0,99,1331	1/1:1,17:18:24.08:437,24,0	0/0:15,0:15:40.31:0,40,551	0/0:12,0:12:36.06:0,36,461	0/0:7,0:7:21.06:0,21,298	0/0:8,0:8:24.03:0,24,316	0/0:7,0:7:18.05:0,18,252	0/0:6,0:6:18.04:0,18,250	0/0:8,0:8:24.06:0,24,343	0/0:6,0:6:3.45:0,3,21	0/0:13,0:13:33.06:0,33,453	0/0:14,0:14:42.08:0,42,577	0/0:19,0:19:57.08:0,57,735	0/0:7,0:7:21.05:0,21,295	0/0:1,0:1:3.01:0,3,46	0/0:11,0:11:24.05:0,24,321	0/0:5,0:5:12.03:0,12,162	0/0:14,0:14:42.10:0,42,579	1/1:0,24:24:65.86:1101,66,0	1/1:2,17:19:30.10:547,30,0	1/1:2,5:5:9.03:165,9,0
chr10	186459	.	ACT	A	811.02	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.859;DP=611;FS=4.018;HRun=0;HaplotypeScore=74.8362;InbreedingCoeff=0.9869;MQ=78.08;MQ0=0;MQRankSum=-3.136;QD=32.44;ReadPosRankSum=3.318;VQSLOD=5.6409;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,105,1779	0/0:8,0:8:24.06:0,24,360	0/0:25,0:26:60.20:0,60,1020	0/0:20,0:21:43.99:0,44,676	0/0:21,0:21:57.18:0,57,973	0/0:22,0:22:63.22:0,63,1117	0/0:27,0:27:75.24:0,75,1302	0/0:21,0:21:63.21:0,63,1082	0/0:22,0:22:63.20:0,63,1089	0/0:25,0:25:72.24:0,72,1251	0/0:9,0:9:24.08:0,24,421	0/0:33,0:33:96.30:0,96,1633	0/0:19,0:19:51.16:0,51,859	0/0:26,0:26:72.23:0,72,1246	0/0:14,0:14:42.14:0,42,745	0/0:18,0:18:54.17:0,54,930	1/1:0,25:25:66.22:906,66,0	0/0:29,0:29:81.23:0,81,1341	0/0:12,0:12:27.09:0,27,465	0/0:22,0:22:63.20:0,63,1088	0/0:52,0:52:99:0,138,2306	0/0:17,0:17:48.14:0,48,795	0/0:8,0:8:21.06:0,21,344	0/0:32,0:32:96.29:0,96,1628	0/0:25,0:25:66.20:0,66,1140	0/0:19,0:19:54.18:0,54,930	0/0:14,0:14:42.13:0,42,710	0/0:7,0:7:21.05:0,21,343
chr10	189685	.	C	CT	1589.87	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-4.085;DP=585;FS=1.704;HRun=9;HaplotypeScore=55.3285;InbreedingCoeff=0.8920;MQ=64.94;MQ0=5;MQRankSum=-0.910;QD=21.78;ReadPosRankSum=2.292;VQSLOD=4.4709;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:92.93:0,93,800	0/0:7,0:7:14.97:0,15,125	0/0:11,0:6:12:0,12,104	0/0:14,0:9:8.75:0,9,129	0/0:26,0:26:62.97:0,63,547	0/0:20,0:20:50.83:0,51,431	0/0:17,1:18:17.84:0,18,383	0/0:37,0:36:89.16:0,89,759	1/1:2,13:15:39.06:418,39,0	0/0:31,0:31:77.97:0,78,677	0/0:29,0:29:74.98:0,75,651	0/0:22,0:22:50.99:0,51,443	0/0:10,0:11:17.01:0,17,136	0/0:17,0:17:1.30:0,1,229	0/0:21,0:21:44.97:0,45,391	0/0:15,0:15:26.99:0,27,234	0/0:39,1:40:71.79:0,72,852	0/0:19,0:19:10.02:0,10,278	0/0:21,0:21:38.98:0,39,338	0/0:27,0:27:61.93:0,62,512	0/0:13,0:13:29.98:0,30,260	0/0:21,0:21:59.99:0,60,521	0/0:12,0:12:26.98:0,27,234	0/0:22,0:22:53.86:0,54,457	0/0:15,0:15:35.16:0,35,281	1/1:5,13:18:39.10:430,39,0	1/1:5,29:31:46.14:734,46,0	1/1:1,5:6:15.04:166,15,0
chr10	191550	.	GT	G	802.12	PASS	AB=0.565;AC=7;AF=0.125;AN=56;BaseQRankSum=3.096;DP=533;FS=2.139;HRun=9;HaplotypeScore=56.6269;InbreedingCoeff=0.8706;MQ=59.66;MQ0=12;MQRankSum=-0.378;QD=16.04;ReadPosRankSum=0.948;VQSLOD=3.8104;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:3,0:39:84.60:0,85,426	0/0:7,0:7:15.04:0,15,171	0/0:24,0:12:32.84:0,33,300	0/0:25,0:14:7.79:0,8,227	0/0:24,0:23:60.17:0,60,682	0/0:23,0:23:63.18:0,63,721	0/0:14,0:14:33.10:0,33,380	0/0:26,0:25:72.20:0,72,821	1/1:1,8:9:18.01:165,18,0	0/0:20,0:20:48.13:0,48,543	0/0:19,0:19:45.13:0,45,515	0/0:17,0:17:48.13:0,48,542	0/0:7,0:7:15.04:0,15,171	0/0:13,0:13:33.09:0,33,368	0/0:24,0:24:63.18:0,63,722	0/0:13,0:13:36.11:0,36,415	0/0:22,0:22:50.32:0,50,599	0/0:25,0:23:65.80:0,66,744	0/0:28,0:24:69.18:0,69,784	0/0:31,0:31:90.21:0,90,1010	0/0:6,0:6:15.04:0,15,173	0/0:11,0:11:33.10:0,33,379	0/0:16,0:15:42.12:0,42,482	0/0:22,0:22:51.15:0,51,587	0/0:27,0:27:69.15:0,69,767	0/1:3,10:13:1.62:235,0,2	1/1:1,20:21:39.02:357,39,0	1/1:0,7:7:21.01:192,21,0
chr10	197748	.	TA	T	604.54	PASS	AB=0.788;AC=6;AF=0.107;AN=56;BaseQRankSum=7.741;DP=454;FS=0.000;HRun=9;HaplotypeScore=48.2004;InbreedingCoeff=0.6123;MQ=57.75;MQ0=20;MQRankSum=-3.833;QD=9.75;ReadPosRankSum=-0.520;VQSLOD=1.3595;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:24:72.21:0,72,830	0/0:15,0:14:36.11:0,36,415	0/0:12,0:10:27.07:0,27,300	0/1:14,0:11:3.40:3,0,114	0/0:25,0:25:66.20:0,66,761	0/0:15,0:15:36.09:0,36,406	0/0:9,0:9:27.08:0,27,311	0/0:20,0:20:60.16:0,60,676	0/0:20,0:20:57.17:0,57,655	0/0:21,0:20:51.14:0,51,581	0/0:22,0:22:63.18:0,63,718	0/0:15,1:16:17.68:0,18,455	0/0:5,0:4:12.03:0,12,136	0/0:13,0:13:24.07:0,24,277	0/0:15,0:14:39.07:0,39,435	0/0:4,0:4:12.04:0,12,138	0/0:16,0:16:33.10:0,33,381	0/0:22,0:22:60.15:0,60,678	0/0:22,0:21:57.15:0,57,646	0/0:32,0:32:90.26:0,90,1029	0/0:4,0:4:12.04:0,12,138	0/0:18,0:18:51.14:0,51,579	0/0:20,0:19:54.13:0,54,609	0/0:6,0:6:18.04:0,18,199	0/0:15,0:15:42.10:0,42,472	0/1:5,14:15:27.21:287,0,27	1/1:1,17:16:39.02:357,39,0	1/1:4,7:5:9:82,9,0
chr10	197833	.	G	GA	593.62	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-2.684;DP=485;FS=0.902;HRun=7;HaplotypeScore=51.5649;InbreedingCoeff=0.9127;MQ=56.73;MQ0=2;MQRankSum=0.264;QD=24.73;ReadPosRankSum=0.405;VQSLOD=3.7668;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:66.10:0,66,637	0/0:6,0:6:15.02:0,15,145	0/0:12,0:10:24.02:0,24,229	0/0:10,0:10:11.34:0,11,115	0/0:33,0:33:87.11:0,87,834	0/0:16,0:16:33.04:0,33,318	0/0:17,0:17:44.99:0,45,411	0/0:21,0:21:54.08:0,54,521	0/0:11,0:11:24.04:0,24,232	0/0:22,0:22:51.06:0,51,488	0/0:22,0:22:54.08:0,54,521	0/0:12,0:12:23.93:0,24,231	0/0:10,0:10:21.02:0,21,197	0/0:15,0:15:36.05:0,36,346	0/0:16,0:16:42.06:0,42,405	0/0:7,0:7:15.02:0,15,145	1/1:0,24:24:57.17:688,57,0	0/0:14,0:14:36.05:0,36,347	0/0:20,0:20:54.07:0,54,513	0/0:30,0:30:78.11:0,78,747	0/0:6,0:6:15.02:0,15,145	0/0:19,0:19:57.09:0,57,550	0/0:16,0:16:35.99:0,36,333	0/0:9,0:9:27.04:0,27,261	0/0:18,0:18:48.08:0,48,463	0/0:29,0:27:72.11:0,72,695	0/0:23,0:23:48.06:0,48,463	0/0:17,0:17:45.02:0,45,425
chr10	198496	.	GGACA	G	1089.59	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.270;DP=672;FS=0.000;HRun=0;HaplotypeScore=106.2122;InbreedingCoeff=0.9793;MQ=61.76;MQ0=0;MQRankSum=1.174;QD=37.57;ReadPosRankSum=1.486;VQSLOD=3.9256;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,25:29:66.23:1184,66,0	0/0:8,0:8:24.08:0,24,613	0/0:23,0:6:18.06:0,18,458	0/0:13,0:11:17.05:0,17,289	0/0:29,0:29:75.24:0,75,1910	0/0:25,0:25:63.22:0,63,1649	0/0:15,0:15:45.15:0,45,1178	0/0:30,0:31:81.75:0,82,2023	0/0:21,0:21:60.21:0,60,1539	0/0:39,0:38:99:0,102,2662	0/0:28,0:28:72.25:0,72,1873	0/0:32,0:32:96.31:0,96,2414	0/0:30,0:30:87.28:0,87,2186	0/0:17,0:17:51.18:0,51,1316	0/0:30,0:30:78.27:0,78,2042	0/0:17,0:17:51.18:0,51,1296	0/0:28,0:28:81.28:0,81,2113	0/0:15,0:15:41.96:0,42,1041	0/0:24,0:24:69.19:0,69,1738	0/0:39,0:39:99:0,105,2664	0/0:29,0:29:87.28:0,87,2211	0/0:21,0:21:60.21:0,60,1557	0/0:24,0:24:60.21:0,60,1496	0/0:17,0:17:45.13:0,45,1101	0/0:24,0:24:54.19:0,54,1372	0/0:24,0:24:72.23:0,72,1801	0/0:30,0:30:84.29:0,84,2154	0/0:10,0:10:27.09:0,27,707
chr10	199235	.	T	TCCCCC	1166.61	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=3.744;DP=467;FS=5.111;HRun=7;HaplotypeScore=84.5411;InbreedingCoeff=0.7937;MQ=67.95;MQ0=1;MQRankSum=-4.316;QD=20.11;ReadPosRankSum=-0.114;VQSLOD=-0.1876;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:75.08:0,75,1260	0/0:9,0:9:18.05:0,18,317	0/0:16,0:14:33.08:0,33,580	0/0:20,0:19:42.08:0,42,698	0/0:18,0:18:48.16:0,48,846	0/0:28,0:28:51.14:0,51,882	0/0:16,0:16:39.12:0,39,673	0/0:25,0:25:60.18:0,60,1027	1/1:4,0:23:42.07:443,42,0	0/0:14,0:14:39.12:0,39,688	0/0:13,0:13:36.12:0,36,635	0/0:15,0:15:33.07:0,33,581	0/0:10,0:10:24.08:0,24,407	0/0:13,0:13:27.07:0,27,464	0/0:10,0:10:30.10:0,30,522	0/0:16,0:16:45.08:0,45,724	0/0:24,0:24:66.22:0,66,1153	0/0:14,0:14:36.11:0,36,635	0/0:12,0:12:27.07:0,27,470	0/0:19,0:19:48.15:0,48,846	0/0:11,0:11:27.09:0,27,476	0/0:19,0:19:54.17:0,54,952	0/0:18,0:18:48.15:0,48,846	0/0:19,0:19:48.16:0,48,846	0/0:19,0:19:48.10:0,48,778	0/1:10,0:10:90.76:152,0,91	1/1:5,7:13:21.07:573,21,0	1/1:0,11:12:6.02:140,6,0
chr10	200610	.	ACTCTCT	A	492.05	PASS	AC=12;AF=0.462;AN=26;BaseQRankSum=0.598;DP=560;FS=4.393;HRun=0;HaplotypeScore=102.2442;InbreedingCoeff=0.4810;MQ=55.07;MQ0=74;MQRankSum=0.346;QD=4.07;ReadPosRankSum=0.598;VQSLOD=1.8195;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	0/0:36,0:26:0:0,0,0	./.	1/1:22,0:15:5.80:32,6,0	0/0:22,0:15:3.83:0,4,23	./.	./.	1/1:15,5:17:10.53:186,11,0	./.	0/0:16,0:15:2.57:0,3,52	0/0:12,0:10:3.01:0,3,61	1/1:24,0:16:3.01:53,3,0	./.	1/1:13,2:10:2.47:19,2,0	./.	1/1:16,0:14:12.04:210,12,0	./.	./.	./.	./.	./.	0/0:30,0:25:8.99:0,9,121	0/0:19,0:17:3.01:0,3,60	1/1:19,0:20:6.02:96,6,0	0/0:13,0:9:0:0,0,0	./.
chr10	203377	.	T	TA	2256.40	PASS	AB=1.000;AC=14;AF=0.259;AN=54;BaseQRankSum=-4.212;DP=242;FS=18.861;HRun=8;HaplotypeScore=26.0308;InbreedingCoeff=0.6791;MQ=72.97;MQ0=0;MQRankSum=0.631;QD=23.50;ReadPosRankSum=3.440;VQSLOD=1.8908;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,19:21:48.14:554,48,0	0/0:7,0:7:21.01:0,21,192	0/0:7,0:8:0.42:0,0,57	0/1:6,0:4:8.81:9,0,15	0/0:17,0:17:39:0,39,352	0/0:8,0:8:18.01:0,18,165	0/1:4,0:4:7.80:8,0,70	0/0:28,0:28:72.03:0,72,656	1/1:0,3:3:9.03:104,9,0	0/0:5,0:5:12.01:0,12,110	0/0:9,0:9:24.01:0,24,219	0/0:9,0:9:27.01:0,27,247	./.	0/0:6,0:6:14.99:0,15,132	0/0:4,0:4:11.99:0,12,105	0/0:3,0:3:8.99:0,9,75	1/1:2,22:24:60.18:692,60,0	0/0:9,0:9:11.94:0,12,104	0/0:11,0:11:30.02:0,30,275	0/0:6,0:6:18.01:0,18,165	0/0:5,0:5:15.01:0,15,137	0/0:2,0:2:6:0,6,55	0/0:5,0:5:12.01:0,12,109	0/0:1,0:1:3:0,3,27	0/0:3,0:3:6:0,6,55	1/1:5,17:22:54.16:619,54,0	1/1:1,8:8:18.05:208,18,0	1/1:0,7:7:21.06:242,21,0
chr10	204148	.	CA	C	2520.39	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=10.299;DP=552;FS=3.900;HRun=6;HaplotypeScore=52.5371;InbreedingCoeff=0.9969;MQ=58.63;MQ0=6;MQRankSum=1.408;QD=24.00;ReadPosRankSum=1.424;VQSLOD=3.1319;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,18:19:45.11:484,45,0	0/0:11,0:11:30.10:0,30,395	0/0:18,0:11:30.09:0,30,368	0/0:14,0:10:26.98:0,27,290	0/0:21,0:21:60.20:0,60,789	0/0:25,0:25:72.23:0,72,947	0/0:17,0:17:45.14:0,45,578	0/0:28,0:25:57.14:0,57,716	1/1:3,17:20:19.43:455,19,0	0/0:25,0:25:69.22:0,69,908	0/0:17,0:17:48.16:0,48,632	0/0:13,0:13:36.12:0,36,473	0/0:15,0:15:42.14:0,42,548	0/0:16,0:17:51.03:0,51,646	0/0:11,0:11:30.10:0,30,395	0/0:14,0:14:39.13:0,39,512	0/0:23,0:23:69.21:0,69,893	0/0:14,0:14:42.13:0,42,539	0/0:21,0:16:42.13:0,42,539	0/0:26,0:26:78.25:0,78,1026	0/0:33,0:33:96.28:0,96,1232	0/0:26,0:26:75.23:0,75,968	0/0:22,0:22:63.20:0,63,829	0/0:19,0:19:55.56:0,56,688	0/0:17,0:17:45.15:0,45,592	1/1:2,19:21:20.67:572,21,0	1/1:1,27:28:69.17:742,69,0	1/1:2,15:16:42.09:443,42,0
chr10	204486	.	C	CAAAAACTAA	14230.09	PASS	AB=0.943;AC=15;AF=0.268;AN=56;BaseQRankSum=-6.640;DP=590;FS=2.346;HRun=0;HaplotypeScore=152.3607;InbreedingCoeff=0.7225;MQ=66.75;MQ0=0;MQRankSum=-14.916;QD=73.35;ReadPosRankSum=2.901;VQSLOD=5.1378;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,23:36:78.27:3642,78,0	0/0:13,0:13:39.09:0,39,1112	0/0:16,0:15:33.04:0,33,858	0/0:17,0:13:12.82:0,13,532	0/0:19,0:19:48.16:0,48,1449	0/1:19,0:20:47.25:47,0,1409	0/0:14,0:14:39.13:0,39,1172	0/0:36,0:36:99:0,105,2807	1/1:5,15:30:57.20:2663,57,0	0/0:21,0:21:60.21:0,60,1837	0/0:17,0:17:45.13:0,45,1235	0/1:13,0:14:41.30:41,0,1134	0/0:23,0:23:69.24:0,69,2105	0/0:20,0:20:60.19:0,60,1760	0/0:19,0:19:57.20:0,57,1781	0/0:18,0:18:48.16:0,48,1398	1/1:4,7:17:30.10:1365,30,0	0/1:16,0:17:45.54:46,0,993	0/0:27,0:27:78.23:0,78,2205	0/0:31,0:31:84.26:0,84,2389	0/0:30,0:30:84.27:0,84,2359	0/0:20,0:20:60.21:0,60,1797	0/0:15,0:15:45.09:0,45,1263	0/0:25,0:25:75.21:0,75,2136	0/0:14,0:14:42.13:0,42,1226	1/1:4,15:21:63.22:2865,63,0	1/1:4,14:28:48.16:2355,48,0	1/1:0,7:10:27.09:1206,27,0
chr10	204833	.	A	AC	3675.82	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=4.383;DP=424;FS=15.104;HRun=4;HaplotypeScore=45.1710;InbreedingCoeff=0.9476;MQ=57.39;MQ0=1;MQRankSum=2.181;QD=33.72;ReadPosRankSum=3.769;VQSLOD=2.4617;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,35:39:99:1331,99,0	0/0:4,0:4:12.03:0,12,136	0/0:8,0:4:9.03:0,9,101	0/0:19,0:15:29.46:0,29,332	0/0:17,0:17:48.13:0,48,541	0/0:8,0:8:21.04:0,21,228	0/0:9,0:9:24.07:0,24,272	0/0:18,0:17:48.14:0,48,545	1/1:0,7:7:15.05:205,15,0	0/0:19,0:19:54.15:0,54,611	0/0:14,0:14:42.12:0,42,476	0/0:17,0:17:45.13:0,45,511	0/0:10,0:10:27.08:0,27,305	0/0:11,0:11:30.06:0,30,329	0/0:9,0:9:15.04:0,15,170	0/0:10,0:10:27.08:0,27,306	1/1:2,22:23:60.20:821,60,0	0/0:17,0:17:48.14:0,48,543	0/0:12,0:10:27.08:0,27,306	0/0:17,0:17:51.13:0,51,569	0/0:41,0:41:99:0,111,1257	0/0:13,0:13:39.08:0,39,423	0/0:10,0:10:30.09:0,30,340	0/0:20,0:20:45.13:0,45,510	0/0:12,0:12:33.09:0,33,374	1/1:2,12:14:5.09:458,5,0	1/1:1,16:17:38.81:533,39,0	1/1:0,8:8:24.08:328,24,0
chr10	215246	.	T	TTC	53.04	PASS	AB=0.926;AC=3;AF=0.060;AN=50;BaseQRankSum=2.605;DP=604;FS=2.023;HRun=0;HaplotypeScore=79.5176;InbreedingCoeff=0.4190;MQ=57.27;MQ0=5;MQRankSum=-3.172;QD=1.96;ReadPosRankSum=-2.406;VQSLOD=1.2836;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:56:99:0,163,2618	0/0:7,0:7:21.07:0,21,330	0/0:30,1:21:2.78:0,3,854	0/1:23,2:13:24.08:24,0,462	0/0:28,0:28:84.27:0,84,1345	0/0:21,0:21:60.20:0,60,971	0/0:32,0:32:96.30:0,96,1513	1/1:0,2:2:6.02:122,6,0	0/0:31,0:31:93.30:0,93,1484	0/0:36,0:36:99:0,108,1714	0/0:24,0:24:69.24:0,69,1125	0/0:27,0:27:81.27:0,81,1291	0/0:26,0:26:75.26:0,75,1219	0/0:20,0:20:60.20:0,60,976	0/0:30,0:30:87.27:0,87,1389	0/0:22,0:22:66.20:0,66,1029	0/0:1,0:1:3.01:0,3,49	0/0:30,0:30:78.22:0,78,1226	0/0:19,0:17:51.17:0,51,795	0/0:23,0:23:69.24:0,69,1126	0/0:25,0:25:72.25:0,72,1166	0/0:21,0:21:63.22:0,63,1027	0/0:21,0:21:63.20:0,63,1002	0/0:21,0:21:59.99:0,60,941	0/0:25,0:25:75.25:0,75,1197	./.	./.	./.
chr10	215600	.	CAT	C	99.41	PASS	AB=0.829;AC=7;AF=0.159;AN=44;BaseQRankSum=3.341;DP=180;FS=2.708;HRun=0;HaplotypeScore=31.2203;InbreedingCoeff=-0.2304;MQ=105.86;MQ0=1;MQRankSum=-0.558;QD=1.36;ReadPosRankSum=2.658;VQSLOD=0.8089;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/0:4,0:4:9.03:0,9,143	0/0:18,0:13:0.47:0,0,1	0/0:18,0:14:4.61:0,5,39	0/1:6,2:12:47.49:47,0,191	0/1:20,3:24:11.32:11,0,759	0/0:6,0:6:3.01:0,3,48	./.	0/0:7,0:7:12.04:0,12,176	0/0:6,0:6:9.03:0,9,134	0/1:4,2:6:53.48:53,0,164	0/0:12,0:12:18.06:0,18,287	0/1:5,0:6:2.11:2,0,126	0/0:3,0:3:6.02:0,6,96	0/0:2,0:3:6.01:0,6,74	0/1:3,1:5:34.86:35,0,128	./.	0/1:10,1:11:7.43:7,0,346	0/1:7,2:9:51:51,0,180	0/0:5,0:5:12.04:0,12,187	0/0:2,0:2:3.01:0,3,40	0/0:5,0:5:6.02:0,6,96	0/0:5,0:5:3.01:0,3,48	0/0:2,0:2:3.01:0,3,48	0/0:5,0:5:3.01:0,3,48	./.	./.	./.
chr10	220628	.	TACACAC	T	614.23	PASS	AB=0.839;AC=12;AF=0.316;AN=38;BaseQRankSum=4.122;DP=389;FS=1.778;HRun=0;HaplotypeScore=92.6888;InbreedingCoeff=-0.4176;MQ=61.52;MQ0=11;MQRankSum=-4.595;QD=2.64;ReadPosRankSum=1.780;VQSLOD=1.2833;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:32:61.95:70,0,62	0/0:5,0:3:3.01:0,3,68	./.	./.	0/0:8,0:7:2.85:0,3,96	0/1:11,2:12:51.47:51,0,177	0/1:26,0:30:51.16:51,0,103	./.	0/1:18,0:19:21.61:22,0,675	0/0:8,0:5:3.01:0,3,97	./.	0/1:10,3:14:87.40:87,0,216	0/0:5,0:5:3.48:0,3,98	0/0:10,0:9:9.03:0,9,290	0/1:8,3:11:99:106,0,223	0/0:12,0:11:6.02:0,6,185	1/1:3,0:5:0.89:2,1,0	0/1:14,4:19:87.31:87,0,205	0/1:3,2:5:29.40:40,0,29	0/0:12,0:9:9.03:0,9,290	0/1:38,0:38:39.71:40,0,239	./.	./.	0/1:36,4:42:99:175,0,785	0/0:11,0:8:21.06:0,21,550	./.	./.	./.
chr10	221950	.	GAGGA	G	367.01	PASS	AB=1.000;AC=11;AF=0.239;AN=46;BaseQRankSum=-1.293;DP=328;FS=3.630;HRun=0;HaplotypeScore=61.0246;InbreedingCoeff=0.4113;MQ=37.38;MQ0=54;MQRankSum=-0.576;QD=4.37;ReadPosRankSum=-2.686;VQSLOD=0.9693;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:18,0:12:57.91:58,0,92	0/0:5,0:5:2.96:0,3,19	./.	./.	./.	0/0:18,0:17:35.72:0,36,442	0/0:20,0:18:23.78:0,24,219	./.	0/0:16,0:8:5.98:0,6,71	0/0:18,0:11:12.02:0,12,149	0/0:9,0:6:3.01:0,3,52	1/1:16,1:14:16.70:158,17,0	0/1:10,0:9:27.31:76,0,27	1/1:8,12:18:6.02:92,6,0	0/0:9,0:7:7.91:0,8,52	0/0:10,0:8:11.86:0,12,106	0/0:6,0:5:7.80:0,8,64	0/0:11,0:9:17.93:0,18,187	0/0:8,0:5:14.97:0,15,125	0/0:16,0:8:5.25:0,5,26	0/0:43,0:33:50.91:0,51,825	0/0:10,0:8:11.84:0,12,78	0/1:8,0:5:10.82:15,0,11	0/0:21,0:18:20.85:0,21,536	0/0:6,0:5:11.97:0,12,121	1/1:7,0:4:8.99:76,9,0	1/1:4,0:4:2.96:34,3,0	./.
chr10	228150	.	A	AGT	1404.17	PASS	AB=0.833;AC=15;AF=0.288;AN=52;BaseQRankSum=7.272;DP=653;FS=22.267;HRun=0;HaplotypeScore=84.3480;InbreedingCoeff=-0.0596;MQ=57.92;MQ0=4;MQRankSum=-7.841;QD=5.03;ReadPosRankSum=-2.766;VQSLOD=0.4855;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:47,4:49:73.40:0,73,1796	0/1:13,1:14:13.92:14,0,532	0/1:26,11:30:99:230,0,638	0/1:24,5:27:99:150,0,777	0/0:27,3:27:66.22:0,66,971	0/1:32,4:35:27.75:28,0,1062	0/1:17,5:21:57.87:58,0,605	1/1:0,10:8:24.08:449,24,0	0/0:33,0:33:93.31:0,93,1369	0/1:33,4:35:66.08:66,0,1264	0/0:26,1:26:63.21:0,63,926	0/0:14,1:15:30.10:0,30,441	0/0:18,0:18:42.14:0,42,618	0/0:23,1:24:13.21:0,13,899	0/0:24,3:26:10.21:0,10,871	0/0:15,3:17:42.14:0,42,618	1/1:0,4:3:9.03:168,9,0	0/1:14,4:17:73.28:73,0,445	0/1:10,1:10:29.07:29,0,326	0/0:33,2:34:84.24:0,84,1208	0/0:27,3:29:22.10:0,22,1048	0/1:24,5:27:92.73:93,0,895	0/0:28,6:30:7.26:0,7,821	0/0:28,1:29:25.35:0,25,1093	0/1:22,4:26:99:105,0,731	0/1:1,4:4:35.16:103,0,35	./.	./.
chr10	230022	.	T	TG	94.42	PASS	AC=2;AF=0.040;AN=50;BaseQRankSum=3.762;DP=461;FS=1.815;HRun=1;HaplotypeScore=50.8419;InbreedingCoeff=0.7978;MQ=60.24;MQ0=3;MQRankSum=-4.075;QD=10.49;ReadPosRankSum=-1.811;VQSLOD=0.8012;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:81.26:0,81,1044	0/0:7,0:7:18.06:0,18,234	0/0:25,0:7:20.88:0,21,232	0/0:24,0:14:34.23:0,34,439	0/0:12,0:12:33.11:0,33,426	0/0:21,0:21:51.17:0,51,662	0/0:20,1:21:51.15:0,51,647	1/1:4,5:7:12.04:180,12,0	0/0:17,0:17:48.16:0,48,623	0/0:25,0:24:69.20:0,69,879	0/0:18,0:18:54.16:0,54,687	0/0:17,0:17:45.15:0,45,582	0/0:13,0:13:36.12:0,36,467	0/0:25,0:25:69.19:0,69,879	0/0:11,0:11:33.09:0,33,414	0/0:10,0:10:27.09:0,27,351	./.	0/0:10,0:10:30.10:0,30,390	0/0:20,1:20:15.26:0,15,694	0/0:15,0:15:42.14:0,42,545	0/0:47,0:47:99:0,129,1631	0/0:16,0:16:48.14:0,48,609	0/0:14,0:14:39.13:0,39,505	0/0:31,0:31:93.24:0,93,1174	0/0:17,0:17:42.14:0,42,545	0/0:2,1:2:3.01:0,3,39	./.	./.
chr10	245434	.	CGTGT	C	318.98	PASS	AB=0.949;AC=9;AF=0.180;AN=50;BaseQRankSum=4.630;DP=654;FS=0.000;HRun=0;HaplotypeScore=117.5483;InbreedingCoeff=0.4241;MQ=50.50;MQ0=24;MQRankSum=-0.218;QD=2.90;ReadPosRankSum=2.411;VQSLOD=1.8804;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:19,16:35:20.73:312,21,0	0/0:13,0:10:6.02:0,6,143	./.	./.	0/0:15,0:13:9.03:0,9,207	0/0:23,0:20:18.05:0,18,342	0/0:29,1:30:6.32:0,6,991	0/0:4,0:3:2.97:0,3,20	0/0:20,0:22:21.07:0,21,359	0/0:30,0:27:29.79:0,30,593	0/0:13,0:12:6.02:0,6,140	0/0:34,0:29:44.89:0,45,844	0/0:20,0:17:23.26:0,23,393	0/0:33,0:32:47.49:0,47,850	0/0:29,0:26:42.13:0,42,917	0/1:19,0:18:0.85:1,0,533	0/1:13,0:8:18.95:19,0,47	0/0:37,0:36:56.25:0,56,1210	0/0:24,0:18:21.03:0,21,368	0/0:15,0:14:9.03:0,9,205	0/0:58,0:58:53.49:0,53,947	0/1:24,1:21:35.33:35,0,151	0/0:19,0:14:15.02:0,15,271	0/0:45,0:47:92.52:0,93,2003	0/0:18,0:18:11.83:0,12,200	1/1:7,0:5:6.01:56,6,0	1/1:3,0:5:3:28,3,0	./.
chr10	245755	.	GAC	G	438.13	PASS	AB=0.975;AC=20;AF=0.357;AN=56;BaseQRankSum=5.585;DP=1065;FS=9.224;HRun=0;HaplotypeScore=218.6379;InbreedingCoeff=-0.4087;MQ=61.91;MQ0=11;MQRankSum=-0.206;QD=0.57;ReadPosRankSum=1.702;VQSLOD=1.5754;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:68,0:63:45.27:45,0,49	0/1:19,1:11:21.70:22,0,112	0/0:53,0:39:6.02:0,6,90	0/0:42,0:33:7.22:0,7,68	0/1:21,1:16:27.83:28,0,146	0/0:37,0:34:18.14:0,18,489	0/1:49,2:49:42.98:43,0,614	0/1:33,0:32:15.41:15,0,108	0/1:50,0:47:23.02:23,0,361	0/0:40,0:36:14.37:0,14,406	1/1:11,1:6:5.85:48,6,0	0/1:41,1:41:7.68:8,0,349	0/1:38,1:38:79.18:79,0,431	0/1:39,1:39:50.20:50,0,407	0/1:66,1:66:61.48:61,0,740	0/1:42,2:43:84.87:85,0,523	0/1:44,0:40:26.06:30,0,26	0/1:40,1:41:1.14:1,0,407	0/1:25,1:23:9.50:10,0,197	0/0:19,1:13:15:0,15,199	0/1:99,1:98:8.54:9,0,1336	0/1:29,0:22:20.59:21,0,336	0/1:19,1:17:6.62:7,0,258	0/0:71,2:70:13.26:0,13,891	0/1:17,0:13:6.90:7,0,31	0/0:13,0:12:12.19:0,12,104	0/0:14,0:11:7.35:0,7,85	0/0:2,0:2:1.83:0,2,7
chr10	245783	.	CACAA	C	1376.80	PASS	AB=0.975;AC=23;AF=0.411;AN=56;BaseQRankSum=10.208;DP=1055;FS=4.103;HRun=0;HaplotypeScore=251.8627;InbreedingCoeff=-0.3919;MQ=42.58;MQ0=44;MQRankSum=-8.301;QD=1.65;ReadPosRankSum=-2.489;VQSLOD=1.5657;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:70,0:61:64.47:64,0,339	0/1:15,0:7:3:3,0,134	0/0:19,0:4:5.16:0,5,69	0/1:23,0:6:20.83:21,0,28	0/1:24,0:18:7.02:7,0,381	0/1:34,3:35:92.31:92,0,904	0/0:57,0:52:80.04:0,80,1237	0/1:35,0:18:48:101,0,48	0/1:46,0:40:3.99:4,0,715	0/1:40,1:36:14.84:15,0,918	0/0:20,0:17:13.33:0,13,235	0/1:39,2:36:5.09:5,0,835	0/1:36,2:36:93.73:94,0,952	0/1:40,2:40:73.90:74,0,757	0/1:58,1:55:60.57:61,0,1093	0/1:41,5:45:99:234,0,941	1/1:40,0:34:41.26:308,41,0	0/1:39,1:38:59.56:60,0,853	0/0:35,0:24:2.40:0,2,347	0/0:20,0:14:30.42:0,30,436	0/1:119,0:109:7.55:8,0,2481	0/0:36,1:30:32.62:0,33,820	0/0:31,0:29:43.70:0,44,588	0/1:60,3:60:99:120,0,1454	0/1:19,1:16:92.21:104,0,92	0/1:18,0:18:33.41:82,0,33	0/1:15,0:10:39.78:54,0,40	1/1:4,0:2:5.45:28,5,0
chr10	245801	.	CAT	C	55.28	PASS	AB=0.990;AC=9;AF=0.161;AN=56;BaseQRankSum=7.723;DP=960;FS=4.915;HRun=0;HaplotypeScore=200.9625;InbreedingCoeff=-0.0242;MQ=44.26;MQ0=50;MQRankSum=-4.947;QD=0.24;ReadPosRankSum=-4.555;VQSLOD=1.3418;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:66,0:58:15.04:15,0,860	0/0:11,0:6:15:0,15,150	0/0:18,0:2:6.02:0,6,95	0/0:24,0:6:1.37:0,1,89	0/0:18,0:17:15.42:0,15,485	0/0:31,2:31:18.46:0,18,910	0/0:53,1:50:99:0,101,1552	0/1:30,0:10:9.61:10,0,93	0/0:47,1:40:46.30:0,46,845	0/0:37,1:34:52.32:0,52,1120	0/0:22,0:22:44.78:0,45,642	0/0:41,1:37:64.53:0,65,1119	0/0:35,0:33:66.29:0,66,1085	0/1:38,0:36:6.58:7,0,728	0/1:45,0:42:29.56:30,0,812	0/0:40,0:39:46.77:0,47,1042	0/1:20,0:15:16.07:55,0,16	0/0:41,0:36:75.98:0,76,1097	0/0:26,1:16:32.50:0,32,455	0/0:21,1:21:30.74:0,31,534	0/0:108,4:97:99:0,192,2980	0/0:35,2:31:77.40:0,77,1044	0/0:32,0:30:34.82:0,35,767	0/0:57,1:56:99:0,110,1848	0/0:19,0:17:9.82:0,10,326	0/1:13,0:13:11.40:11,0,92	0/1:13,1:9:39.56:48,0,40	1/1:3,0:1:2.60:10,3,0
chr10	245822	.	ACACACT	A	961.72	PASS	AB=0.963;AC=16;AF=0.286;AN=56;BaseQRankSum=13.602;DP=936;FS=39.825;HRun=0;HaplotypeScore=235.4126;InbreedingCoeff=-0.2530;MQ=49.23;MQ0=42;MQRankSum=-12.083;QD=2.29;ReadPosRankSum=-1.561;VQSLOD=1.4209;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:47:18.78:0,19,1933	0/0:7,0:6:14.56:0,15,448	0/0:38,0:6:14.57:0,15,155	0/0:25,0:6:7.81:0,8,142	0/0:18,0:18:0.03:0,0,1103	0/1:30,1:29:73.48:73,0,1567	0/0:42,0:38:91.27:0,91,2888	0/0:14,1:5:4.53:0,5,25	0/1:51,2:44:96.15:96,0,2189	0/0:42,0:39:10.04:0,10,2297	0/0:27,1:28:50.45:0,50,1648	0/1:29,4:31:99:141,0,1814	0/0:37,0:35:19.37:0,19,2047	0/1:31,3:32:99:122,0,1827	0/1:41,3:41:99:284,0,1618	0/1:41,3:43:99:167,0,2232	0/1:12,0:9:51.11:51,0,89	0/1:43,1:37:29.46:29,0,2679	0/1:19,0:14:30.69:31,0,601	0/1:28,1:27:12.61:13,0,1581	0/0:106,1:94:99:0,198,5696	0/0:37,0:34:65.60:0,66,1944	0/1:31,1:30:26.95:27,0,1695	0/0:63,0:62:99:0,131,4459	0/1:22,1:22:42.46:42,0,1239	0/1:10,0:9:10.63:14,0,11	0/1:10,0:5:0.20:19,0,0	1/1:2,0:1:1.55:4,2,0
chr10	245824	.	ACACT	A	818.79	PASS	AB=0.952;AC=17;AF=0.315;AN=54;BaseQRankSum=14.290;DP=935;FS=49.249;HRun=0;HaplotypeScore=211.6415;InbreedingCoeff=-0.1537;MQ=49.43;MQ0=42;MQRankSum=-12.839;QD=1.76;ReadPosRankSum=-3.094;VQSLOD=0.7721;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:58,0:47:44.37:44,0,1492	0/0:6,0:6:11.86:0,12,323	0/0:38,0:6:17.75:0,18,189	0/0:25,0:6:13.89:0,14,163	0/0:19,0:19:15.97:0,16,953	0/1:31,0:29:60.18:60,0,1292	0/0:41,1:39:95.77:0,96,2398	./.	0/1:52,0:44:37.54:38,0,1725	0/1:39,3:39:79.89:80,0,1877	0/0:26,2:28:14.27:0,14,1288	0/1:31,1:30:20.99:21,0,1420	0/1:37,0:35:20.72:21,0,1598	0/1:35,0:33:74.38:74,0,1459	0/1:44,0:41:99:215,0,1273	0/1:44,0:43:31.11:31,0,1875	0/1:9,3:9:47.60:88,0,48	0/0:45,0:38:32.95:0,33,2169	0/0:18,0:14:7.32:0,7,489	0/0:28,0:26:27.30:0,27,1280	0/0:106,1:94:99:0,203,4837	0/0:34,1:33:24.48:0,24,1514	0/1:30,3:31:46.71:47,0,1418	0/0:65,0:64:99:0,128,3587	0/1:21,2:22:84.43:84,0,966	1/1:11,0:9:2.98:22,3,0	0/1:8,2:5:0.15:93,0,0	1/1:1,1:1:3.01:57,3,0
chr10	245826	.	ACT	A	257.99	PASS	AB=0.921;AC=14;AF=0.259;AN=54;BaseQRankSum=14.567;DP=933;FS=48.790;HRun=0;HaplotypeScore=189.0247;InbreedingCoeff=0.0697;MQ=49.32;MQ0=43;MQRankSum=-11.922;QD=0.91;ReadPosRankSum=-4.074;VQSLOD=-0.0389;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:55,3:47:35.34:0,35,1094	0/0:6,0:6:12.22:0,12,232	0/0:40,0:6:11.67:0,12,134	0/0:28,0:6:7.36:0,7,118	0/0:21,1:22:16.66:0,17,719	0/0:30,1:29:2.90:0,3,940	0/0:37,2:37:99:0,99,1729	./.	0/1:52,2:46:49.83:50,0,1239	0/0:38,3:38:19.64:0,20,1309	0/0:28,0:28:21.62:0,22,945	0/0:32,1:31:5.31:0,5,1024	0/1:34,1:33:31.72:32,0,1153	0/1:31,4:33:15.55:16,0,1035	0/1:36,8:41:71.93:72,0,887	0/1:40,1:40:9.84:10,0,1359	0/1:11,2:10:45.01:78,0,45	0/0:46,0:39:44.86:0,45,1589	0/1:13,3:12:78.59:79,0,357	0/0:27,0:25:42.26:0,42,978	0/0:105,2:94:99:0,208,3593	0/0:34,0:32:25.52:0,26,1088	0/0:33,0:31:10.16:0,10,1030	0/0:65,0:64:99:0,127,2647	0/1:24,0:23:5.30:5,0,729	1/1:8,3:9:2.13:5,2,0	1/1:10,0:6:7.91:42,8,0	1/1:1,1:1:2.92:17,3,0
chr10	245947	.	A	AAC	940.86	PASS	AB=0.987;AC=6;AF=0.120;AN=50;BaseQRankSum=6.873;DP=971;FS=1.994;HRun=0;HaplotypeScore=168.7759;InbreedingCoeff=0.4251;MQ=45.65;MQ0=81;MQRankSum=-4.756;QD=6.31;ReadPosRankSum=-1.033;VQSLOD=3.1612;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:50,19:50:14.95:899,15,0	0/0:18,0:17:39.08:0,39,467	./.	./.	0/0:36,0:35:87.26:0,87,1073	0/0:27,0:24:6.50:0,6,443	0/0:41,0:38:70.26:0,70,785	0/0:15,0:3:2.99:0,3,24	0/0:29,0:24:0.98:0,1,457	0/0:52,0:41:69.20:0,69,838	0/0:22,0:20:42.09:0,42,503	0/0:31,0:30:57.18:0,57,710	0/0:35,0:33:35.67:0,36,804	0/0:37,0:35:17.57:0,18,549	0/0:35,0:32:20.76:0,21,597	0/0:42,0:36:36.21:0,36,801	0/1:37,0:27:81.59:82,0,96	0/0:48,0:44:85.28:0,85,1104	0/0:46,0:26:10.36:0,10,489	0/0:26,0:22:54.13:0,54,652	0/0:109,0:89:99:0,200,2346	0/1:37,1:32:5.36:5,0,680	0/0:22,0:20:35.79:0,36,449	0/0:64,0:57:99:0,106,1370	0/0:32,0:33:78.08:0,78,942	0/0:10,0:8:1.99:0,2,45	1/1:5,0:3:6.02:73,6,0	./.
chr10	245957	.	C	CAT	483.41	PASS	AB=0.986;AC=5;AF=0.100;AN=50;BaseQRankSum=8.024;DP=920;FS=0.646;HRun=0;HaplotypeScore=150.4775;InbreedingCoeff=0.2042;MQ=46.36;MQ0=78;MQRankSum=-3.065;QD=3.61;ReadPosRankSum=0.052;VQSLOD=2.1974;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:62,1:45:65.75:451,0,66	0/0:17,0:16:45.06:0,45,630	./.	./.	0/0:36,0:36:93.29:0,93,1373	0/0:27,1:27:8.34:0,8,692	0/0:36,0:31:82.99:0,83,1048	0/0:27,0:3:3.01:0,3,43	0/0:27,0:23:26.50:0,26,627	0/0:41,0:33:82.48:0,82,1164	0/0:19,0:18:48.13:0,48,679	0/0:28,0:27:69.17:0,69,966	0/0:28,1:27:20.69:0,21,1003	0/0:31,2:29:7.40:0,7,750	0/0:34,1:32:19.23:0,19,878	0/0:39,1:36:31.48:0,31,1091	0/1:30,0:20:25.92:26,0,152	0/0:49,0:45:99:0,111,1499	0/1:37,1:20:3.65:4,0,631	0/0:27,0:24:63.17:0,63,895	0/0:109,0:92:99:0,229,3198	0/0:31,1:28:6.53:0,7,895	0/0:21,0:19:51.01:0,51,662	0/0:61,1:57:99:0,146,1914	0/0:31,0:30:81.14:0,81,1183	0/0:10,0:7:6.84:0,7,65	1/1:0,3:2:6.02:109,6,0	./.
chr10	245961	.	T	TAC	133.76	PASS	AB=0.968;AC=8;AF=0.160;AN=50;BaseQRankSum=10.364;DP=921;FS=25.085;HRun=0;HaplotypeScore=146.7951;InbreedingCoeff=0.0570;MQ=46.43;MQ0=79;MQRankSum=-5.760;QD=0.56;ReadPosRankSum=-3.168;VQSLOD=0.4261;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:63,2:48:99:100,0,155	0/0:16,1:16:42.10:0,42,549	./.	./.	0/0:36,0:36:94.12:0,94,1193	0/1:22,1:23:43.30:43,0,545	0/1:38,0:32:15.27:15,0,869	0/0:28,0:3:6.02:0,6,76	0/1:28,1:25:14.41:14,0,517	0/0:40,0:32:79.50:0,79,1051	0/0:18,0:17:42.14:0,42,569	0/0:29,0:28:70.01:0,70,914	0/0:29,0:27:41.69:0,42,950	0/1:30,1:27:8.11:8,0,571	0/0:34,0:31:31.77:0,32,814	0/0:38,0:34:44.76:0,45,911	0/0:27,2:19:13.04:0,13,142	0/1:45,3:44:0.85:1,0,1181	0/0:39,0:18:10.02:0,10,494	0/0:26,0:23:59.37:0,59,750	0/0:113,0:97:99:0,226,2965	0/0:32,0:29:38.72:0,39,862	0/0:21,0:19:37.71:0,38,594	0/0:58,3:56:50.90:0,51,1585	0/0:30,0:29:69.21:0,69,938	0/0:10,0:7:3.01:0,3,41	1/1:4,0:3:6.02:74,6,0	./.
chr10	246009	.	A	AAC	892.74	PASS	AC=10;AF=0.200;AN=50;BaseQRankSum=5.388;DP=903;FS=22.399;HRun=0;HaplotypeScore=123.6414;InbreedingCoeff=0.7691;MQ=48.31;MQ0=63;MQRankSum=-4.269;QD=8.12;ReadPosRankSum=-2.081;VQSLOD=1.6091;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:20,28:43:9.24:650,9,0	0/0:12,0:11:26.91:0,27,303	./.	./.	0/0:33,0:31:58.43:0,58,697	0/0:30,0:29:65.63:0,66,762	0/0:34,0:30:27.68:0,28,747	./.	1/1:13,23:35:21.07:322,21,0	0/0:44,0:38:39.77:0,40,766	0/0:22,0:22:50.54:0,51,518	0/0:27,0:27:54.04:0,54,638	0/0:32,0:31:67.04:0,67,799	0/0:32,0:32:67.86:0,68,826	0/0:30,0:30:51.98:0,52,613	0/0:35,0:34:72.25:0,72,850	1/1:14,0:8:0.89:2,1,0	0/0:39,0:37:6.08:0,6,749	0/0:45,0:23:24.81:0,25,481	0/0:31,0:27:72.10:0,72,840	0/0:113,0:99:99:0,153,2134	0/0:28,0:25:60.17:0,60,716	0/0:23,0:20:45.13:0,45,535	0/0:58,0:55:69.24:0,69,1178	0/0:25,0:23:29.86:0,30,560	1/1:8,0:5:3.01:30,3,0	0/0:3,0:3:0.29:0,0,12	1/1:3,0:2:4.21:23,4,0
chr10	251986	.	T	TA	1736.91	PASS	AC=4;AF=0.080;AN=50;BaseQRankSum=-5.741;DP=593;FS=4.359;HRun=6;HaplotypeScore=58.4937;InbreedingCoeff=0.8845;MQ=45.53;MQ0=61;MQRankSum=4.004;QD=26.32;ReadPosRankSum=1.744;VQSLOD=4.2314;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,39:39:65.73:1139,66,0	0/0:12,0:12:18.04:0,18,184	0/0:21,0:11:21.04:0,21,211	0/0:24,0:6:9.01:0,9,88	0/0:31,0:30:57.02:0,57,557	0/0:28,0:28:54.12:0,54,550	0/0:30,0:21:54.12:0,54,551	./.	0/0:33,0:32:69.10:0,69,685	0/0:24,0:20:56.12:0,56,543	0/0:14,0:13:36.02:0,36,354	0/0:18,0:18:39.09:0,39,398	0/0:27,0:27:63.13:0,63,643	0/0:20,0:18:44.96:0,45,448	0/0:30,0:28:60.13:0,60,612	0/0:23,0:21:48.11:0,48,490	1/1:1,24:25:57.18:717,57,0	0/0:14,0:13:30.07:0,30,306	0/0:22,0:15:33.07:0,33,333	0/0:20,0:17:36.07:0,36,361	0/0:20,0:20:45.10:0,45,459	0/0:33,0:33:54.12:0,54,550	0/0:26,0:24:51.08:0,51,510	0/0:21,0:21:51.12:0,51,520	0/0:27,0:23:60.08:0,60,600	0/0:1,0:1:3.01:0,3,31	./.	./.
chr10	253452	.	TG	T	760.02	PASS	AC=4;AF=0.077;AN=52;BaseQRankSum=9.320;DP=445;FS=4.595;HRun=8;HaplotypeScore=57.2301;InbreedingCoeff=0.8610;MQ=44.18;MQ0=44;MQRankSum=-4.462;QD=18.10;ReadPosRankSum=3.418;VQSLOD=3.6137;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,15:17:8.87:368,9,0	0/0:10,0:9:27.04:0,27,300	0/0:25,0:8:18.05:0,18,211	0/0:21,0:4:12.04:0,12,140	0/0:19,0:17:39.12:0,39,467	0/0:18,0:15:36.07:0,36,410	0/0:16,0:13:33.10:0,33,395	0/0:10,0:8:24.05:0,24,276	0/0:30,0:30:84.12:0,84,945	0/0:16,0:16:42.10:0,42,489	0/0:11,0:10:24.07:0,24,280	0/0:21,0:19:54.16:0,54,641	0/0:13,0:11:30.09:0,30,357	0/0:13,0:13:36.11:0,36,423	0/0:17,0:14:36.11:0,36,431	0/0:11,0:10:21.06:0,21,253	1/1:4,19:21:24.01:504,24,0	0/0:27,0:24:72.22:0,72,866	0/0:15,0:12:36.11:0,36,432	0/0:10,0:10:26.97:0,27,281	0/0:28,0:26:72.22:0,72,866	0/0:21,0:20:48.14:0,48,572	0/0:14,0:14:30.09:0,30,356	0/0:20,0:16:39.12:0,39,471	0/0:14,0:14:42.03:0,42,473	0/0:1,0:1:3.01:0,3,36	./.	./.
chr10	253518	.	CTAACA	C	582.18	PASS	AC=4;AF=0.087;AN=46;BaseQRankSum=4.344;DP=533;FS=30.349;HRun=0;HaplotypeScore=35.8120;InbreedingCoeff=0.5768;MQ=20.33;MQ0=317;MQRankSum=-4.839;QD=16.63;ReadPosRankSum=1.789;VQSLOD=1.3121;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,6:9:15.05:319,15,0	0/0:9,0:3:9.03:0,9,279	./.	./.	0/0:23,0:5:12.04:0,12,293	0/0:16,0:8:12.04:0,12,291	0/0:26,0:5:12.04:0,12,335	0/0:18,0:1:3.01:0,3,94	0/0:20,0:13:24.08:0,24,643	0/0:15,0:1:3.01:0,3,94	0/0:16,0:5:12.04:0,12,277	0/0:16,0:7:12.04:0,12,358	0/0:19,0:7:5.99:0,6,187	0/0:20,0:10:6.02:0,6,187	0/0:22,0:10:21.07:0,21,597	0/0:13,0:7:9.03:0,9,219	1/1:6,8:7:17.73:375,18,0	0/0:24,0:18:33.11:0,33,1032	0/0:19,0:4:12.04:0,12,374	0/0:19,0:2:6.02:0,6,187	0/0:46,0:16:18.06:0,18,511	0/0:31,0:7:9.03:0,9,238	0/0:11,0:2:6.02:0,6,187	0/0:25,0:14:18.06:0,18,531	0/0:20,0:8:18.06:0,18,451	./.	./.	./.
chr10	256027	.	TTC	T	497.77	PASS	AB=0.880;AC=27;AF=0.750;AN=36;BaseQRankSum=0.018;DP=590;FS=1.594;HRun=0;HaplotypeScore=86.9782;InbreedingCoeff=0.2981;MQ=50.64;MQ0=43;MQRankSum=2.541;QD=1.73;ReadPosRankSum=1.712;VQSLOD=1.8072;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:19:2.96:0,3,19	1/1:11,2:12:3:32,3,0	./.	./.	./.	./.	1/1:12,2:13:2.76:32,3,0	0/0:10,0:9:2.49:0,2,6	1/1:24,0:26:1.10:11,1,0	0/1:19,3:19:5.79:80,0,6	./.	1/1:21,0:20:8.96:82,9,0	1/1:24,0:23:5.66:51,6,0	1/1:22,3:23:2.80:32,3,0	1/1:14,2:15:3.01:32,3,0	1/1:18,0:17:5.88:47,6,0	./.	0/0:15,0:14:17.99:0,18,188	./.	1/1:22,0:21:2.99:24,3,0	0/0:38,0:32:0:0,0,0	1/1:23,0:20:5.98:52,6,0	1/1:19,0:18:0.47:1,0,0	1/1:24,3:24:9.02:96,9,0	1/1:15,0:14:3.01:32,3,0	./.	./.	./.
chr10	256085	.	CCT	C	54.39	PASS	AB=0.845;AC=3;AF=0.056;AN=54;BaseQRankSum=5.126;DP=411;FS=18.120;HRun=0;HaplotypeScore=65.7661;InbreedingCoeff=0.1177;MQ=60.40;MQ0=28;MQRankSum=-4.471;QD=2.27;ReadPosRankSum=-1.090;VQSLOD=0.0214;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:10,4:11:7.53:0,8,457	0/0:5,0:5:15.05:0,15,278	0/0:47,0:16:41.25:0,41,677	0/0:72,0:25:36.31:0,36,571	0/0:6,0:6:18.06:0,18,283	0/0:17,0:16:42.04:0,42,734	0/0:13,0:10:27.09:0,27,526	0/0:1,3:1:2.84:0,3,14	0/1:8,3:11:27.78:28,0,310	0/0:13,0:12:36.12:0,36,692	0/0:10,0:10:24.08:0,24,486	0/0:17,1:17:48.15:0,48,930	0/0:11,1:9:27.09:0,27,542	0/0:14,2:13:27.09:0,27,547	0/0:12,2:12:27.56:0,28,549	0/0:14,1:12:30.10:0,30,588	0/1:8,4:10:99:114,0,330	0/0:13,0:12:27.03:0,27,546	0/0:11,2:9:21.95:0,22,474	0/0:10,0:10:27.08:0,27,512	0/0:12,1:11:30.10:0,30,609	0/0:14,0:14:36.12:0,36,701	0/0:8,0:8:24.08:0,24,486	0/0:26,1:26:72.25:0,72,1435	0/0:11,0:11:33.07:0,33,594	0/0:1,0:1:3.01:0,3,59	0/1:1,0:1:0:0,0,0	./.
chr10	258523	.	T	TTTTG	2007.82	PASS	AC=4;AF=0.080;AN=50;BaseQRankSum=3.449;DP=515;FS=11.540;HRun=0;HaplotypeScore=99.8455;InbreedingCoeff=0.9113;MQ=55.72;MQ0=9;MQRankSum=-4.759;QD=25.74;ReadPosRankSum=-1.279;VQSLOD=2.1197;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:26,18:34:65.35:1169,65,0	0/0:9,0:9:27.07:0,27,373	0/0:29,0:16:23.38:0,23,296	0/0:23,0:16:28.91:0,29,284	0/0:23,0:23:60.02:0,60,837	0/0:21,0:21:57.12:0,57,852	0/0:23,0:23:66.16:0,66,1021	./.	0/0:19,0:19:51.16:0,51,806	0/0:21,0:21:54.13:0,54,758	0/0:23,0:23:51.02:0,51,766	0/0:23,0:22:57.14:0,57,881	0/0:11,0:11:21.06:0,21,328	0/0:11,0:11:30.08:0,30,454	0/0:16,0:16:36.07:0,36,478	0/0:13,0:13:30.10:0,30,502	1/1:19,15:26:62.59:958,63,0	0/0:33,0:32:93.08:0,93,1404	0/0:28,0:25:60.02:0,60,857	0/0:14,0:14:39.12:0,39,602	0/0:11,0:11:30.07:0,30,428	0/0:13,0:13:36.12:0,36,577	0/0:18,0:18:39.12:0,39,628	0/0:25,0:24:63.22:0,63,1051	0/0:27,0:27:71.01:0,71,1104	0/0:1,0:1:3.01:0,3,50	./.	./.
chr10	258545	.	GTT	G	672.73	PASS	AB=0.975;AC=5;AF=0.100;AN=50;BaseQRankSum=8.569;DP=545;FS=16.739;HRun=9;HaplotypeScore=80.8183;InbreedingCoeff=0.7321;MQ=55.44;MQ0=12;MQRankSum=-4.468;QD=5.51;ReadPosRankSum=0.850;VQSLOD=-0.5994;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:16,28:34:37.27:377,37,0	0/0:9,0:9:21.07:0,21,335	0/0:46,0:20:29.21:0,29,537	0/1:38,1:19:8.63:9,0,415	0/0:23,0:23:63.19:0,63,987	0/0:23,0:23:63.15:0,63,961	0/0:23,0:23:59.69:0,60,929	./.	0/0:19,0:19:57.16:0,57,896	0/0:14,0:15:32.59:0,33,478	0/0:22,0:21:54.18:0,54,865	0/0:20,0:19:48.16:0,48,786	0/0:5,0:6:14.54:0,15,192	0/0:13,0:13:30.06:0,30,441	0/0:19,0:19:54.01:0,54,812	0/0:12,0:12:30.10:0,30,481	1/1:10,29:30:35.84:411,36,0	0/0:29,0:28:75.24:0,75,1201	0/0:20,0:17:39.04:0,39,533	0/0:16,0:16:38.62:0,39,597	0/0:11,0:11:27.08:0,27,417	0/0:16,0:16:36.12:0,36,589	0/0:25,0:25:72.23:0,72,1145	0/0:24,0:24:68.72:0,69,1092	0/0:25,0:25:66.22:0,66,1059	0/0:3,0:2:3.01:0,3,49	./.	./.
chr10	260271	.	GGGCAGGACA	G	1306.08	PASS	AC=2;AF=0.040;AN=50;BaseQRankSum=6.406;DP=678;FS=14.456;HRun=0;HaplotypeScore=180.2176;InbreedingCoeff=0.8878;MQ=62.89;MQ0=20;MQRankSum=-6.513;QD=39.58;ReadPosRankSum=0.241;VQSLOD=2.6464;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:52:99:0,117,4760	0/0:11,0:11:23.65:0,24,1108	0/0:35,0:12:15.03:0,15,307	0/0:27,0:16:24.08:0,24,875	0/0:23,0:23:54.17:0,54,2133	0/0:26,0:26:60.21:0,60,2668	0/0:27,0:27:72.25:0,72,2930	./.	1/1:4,29:24:48.16:1400,48,0	0/0:27,0:27:66.21:0,66,2818	0/0:13,0:13:30.10:0,30,1151	0/0:27,0:27:65.85:0,66,2789	0/0:35,0:35:81.03:0,81,3678	0/0:23,0:23:56.95:0,57,2509	0/0:26,0:26:60.21:0,60,2796	0/0:24,0:24:60.21:0,60,2617	0/0:32,0:31:81.26:0,81,3663	0/0:18,0:18:45.15:0,45,1925	0/0:24,0:24:57.19:0,57,2100	0/0:19,0:19:33.57:0,34,1127	0/0:40,0:40:99:0,102,4543	0/0:28,0:26:63.22:0,63,2592	0/0:22,0:22:45.15:0,45,1584	0/0:37,0:37:93.27:0,93,3923	0/0:34,0:34:51.18:0,51,2158	0/0:3,0:2:6.02:0,6,256	./.	./.
chr10	265150	.	G	GC	629.44	PASS	AC=4;AF=0.083;AN=48;BaseQRankSum=1.857;DP=671;FS=0.000;HRun=5;HaplotypeScore=77.9093;InbreedingCoeff=0.9910;MQ=65.44;MQ0=3;MQRankSum=-1.255;QD=18.51;ReadPosRankSum=-1.146;VQSLOD=2.9753;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,24:21:47.99:569,48,0	0/0:11,0:11:27.07:0,27,290	0/0:25,0:21:57.11:0,57,597	0/0:34,0:27:63.07:0,63,654	0/0:31,0:31:84.18:0,84,891	0/0:32,0:32:93.23:0,93,1000	0/0:24,0:24:63.14:0,63,669	./.	0/0:40,0:40:99:0,111,1174	0/0:35,0:35:87.19:0,87,925	0/0:27,0:27:69.13:0,69,722	0/0:24,0:23:63.14:0,63,669	0/0:26,0:26:66.13:0,66,691	0/0:32,0:32:90.17:0,90,939	0/0:30,0:30:84.21:0,84,903	0/0:21,0:20:54.10:0,54,565	1/1:1,8:7:14.99:177,15,0	0/0:23,0:21:60.15:0,60,645	0/0:16,0:15:39.10:0,39,418	0/0:40,0:40:99:0,114,1185	0/0:46,0:46:99:0,132,1370	0/0:23,0:23:60.12:0,60,633	0/0:36,0:36:96.12:0,96,1008	0/0:40,0:40:99:0,108,1152	0/0:21,0:21:60.15:0,60,645	./.	./.	./.
chr10	266391	.	GT	G	1725.56	PASS	AC=4;AF=0.083;AN=48;BaseQRankSum=4.051;DP=602;FS=9.506;HRun=1;HaplotypeScore=57.4163;InbreedingCoeff=0.9906;MQ=49.05;MQ0=64;MQRankSum=2.792;QD=28.29;ReadPosRankSum=0.401;VQSLOD=2.3094;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,32:32:81.27:1132,81,0	0/0:11,0:9:27.09:0,27,431	0/0:32,0:10:30.09:0,30,442	0/0:20,0:6:18.06:0,18,282	0/0:31,0:28:78.27:0,78,1242	0/0:18,0:16:33.11:0,33,526	0/0:30,0:27:66.23:0,66,1051	./.	0/0:36,0:32:69.18:0,69,1071	0/0:23,0:19:57.19:0,57,909	0/0:20,0:19:42.14:0,42,669	0/0:28,0:27:72.23:0,72,1125	0/0:25,0:22:60.20:0,60,954	0/0:40,0:39:96.33:0,96,1531	0/0:28,0:25:60.20:0,60,957	0/0:26,0:25:60.20:0,60,958	1/1:2,26:24:51.17:713,51,0	0/0:18,0:14:36.12:0,36,575	0/0:16,0:13:39.13:0,39,624	0/0:23,0:19:51.13:0,51,785	0/0:34,0:32:93.32:0,93,1469	0/0:19,0:17:48.15:0,48,744	0/0:10,0:8:18.06:0,18,287	0/0:26,0:24:66.22:0,66,1042	0/0:23,0:23:60.19:0,60,931	./.	./.	./.
chr10	268062	.	AT	A	341.34	PASS	AB=0.721;AC=3;AF=0.063;AN=48;BaseQRankSum=4.903;DP=493;FS=0.893;HRun=8;HaplotypeScore=60.3551;InbreedingCoeff=0.6193;MQ=42.65;MQ0=48;MQRankSum=-1.417;QD=8.13;ReadPosRankSum=-0.652;VQSLOD=0.7681;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:54.17:0,54,652	0/0:8,0:8:21.05:0,21,242	0/0:6,0:4:12.04:0,12,145	0/0:14,0:9:27.08:0,27,310	0/0:31,0:29:81.25:0,81,977	0/0:32,0:30:78.24:0,78,938	0/0:16,0:14:33.08:0,33,384	1/1:5,6:6:18.03:174,18,0	0/1:19,12:28:99:269,0,429	0/0:24,0:23:69.21:0,69,833	0/0:40,0:38:99:0,108,1304	0/0:14,0:14:39.12:0,39,470	0/0:28,0:27:75.19:0,75,889	0/0:17,0:17:45.14:0,45,543	0/0:24,0:21:60.12:0,60,706	0/0:21,0:19:57.17:0,57,688	0/0:9,0:9:24.07:0,24,288	0/0:13,0:11:30.09:0,30,362	0/0:20,0:19:54.14:0,54,638	0/0:39,0:39:99:0,111,1340	0/0:17,0:15:39.12:0,39,471	0/0:16,0:13:39.08:0,39,455	0/0:21,0:20:60.14:0,60,707	0/0:12,0:11:33.09:0,33,388	./.	./.	./.	./.
chr10	269638	.	TC	T	64.14	PASS	AC=2;AF=0.043;AN=46;BaseQRankSum=3.221;DP=542;FS=0.000;HRun=3;HaplotypeScore=39.8767;InbreedingCoeff=0.4015;MQ=37.75;MQ0=135;MQRankSum=-2.386;QD=8.02;ReadPosRankSum=-0.564;VQSLOD=0.3994;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:28:24.06:0,24,325	0/0:6,0:6:3.01:0,3,43	./.	./.	0/0:26,0:23:6.02:0,6,81	0/0:17,0:10:12.03:0,12,149	0/0:25,0:17:27.09:0,27,388	1/1:3,5:4:12.04:148,12,0	0/0:26,0:22:21.06:0,21,281	0/0:31,0:23:66.22:0,66,934	0/0:29,0:21:9.03:0,9,121	0/0:21,0:16:18.06:0,18,251	0/0:29,0:26:17.93:0,18,258	0/0:19,0:18:15.05:0,15,215	0/0:22,0:22:27.02:0,27,346	0/0:32,0:29:29.70:0,30,400	0/0:16,0:14:3.01:0,3,43	0/0:5,0:4:9.03:0,9,125	0/0:16,0:6:18.06:0,18,257	0/0:17,0:14:12.04:0,12,173	0/0:36,0:28:23.93:0,24,276	./.	0/0:13,0:10:9.03:0,9,130	0/0:4,0:4:3.01:0,3,43	0/0:23,0:16:9.03:0,9,129	0/0:4,0:1:3.01:0,3,43	./.	./.
chr10	278352	.	CTTTA	C	111.84	PASS	AC=6;AF=0.176;AN=34;BaseQRankSum=4.129;DP=175;FS=6.190;HRun=0;HaplotypeScore=32.4394;InbreedingCoeff=0.4944;MQ=50.81;MQ0=3;MQRankSum=-1.332;QD=3.02;ReadPosRankSum=0.280;VQSLOD=-0.0242;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:6,0:6:6.02:0,6,123	./.	./.	0/0:6,0:6:9.03:0,9,142	0/0:9,0:9:8.96:0,9,159	0/0:6,0:6:3:0,3,25	./.	1/1:6,1:5:8.98:111,9,0	0/0:9,0:9:6.01:0,6,97	0/0:4,0:4:5.97:0,6,89	0/0:3,0:3:3:0,3,25	0/0:6,0:6:5.99:0,6,50	0/0:2,0:2:6.02:0,6,119	0/0:6,0:6:5.95:0,6,57	1/1:10,0:10:3:26,3,0	1/1:20,0:19:8.92:82,9,0	0/0:14,0:14:23.88:0,24,298	0/0:10,0:9:6.01:0,6,82	./.	0/0:5,0:5:8.98:0,9,160	./.	./.	./.	0/0:12,0:12:8.98:0,9,159	./.	./.	./.
chr10	278644	.	GTATT	G	275.34	PASS	AC=6;AF=0.150;AN=40;BaseQRankSum=4.360;DP=207;FS=16.254;HRun=0;HaplotypeScore=19.0877;InbreedingCoeff=0.4926;MQ=31.21;MQ0=37;MQRankSum=-1.482;QD=7.44;ReadPosRankSum=1.031;VQSLOD=0.1118;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:10,5:10:12.04:181,12,0	0/0:2,0:2:6.02:0,6,122	./.	./.	0/0:6,0:5:9.03:0,9,181	0/0:13,0:10:18.06:0,18,360	0/0:5,0:2:3.01:0,3,62	./.	0/0:11,0:9:8.99:0,9,144	0/0:13,0:8:15.05:0,15,271	0/0:7,0:2:6.02:0,6,118	0/0:4,0:4:6.02:0,6,124	0/0:10,0:6:15.05:0,15,309	0/0:4,0:3:3.01:0,3,36	0/0:10,0:7:9.03:0,9,169	./.	1/1:10,8:13:11.98:160,12,0	0/0:24,0:19:21.01:0,21,346	0/0:17,0:9:3:0,3,25	0/0:8,0:2:3.01:0,3,62	./.	0/0:4,0:3:6.02:0,6,103	1/1:3,1:2:3.01:47,3,0	0/0:4,0:4:3.01:0,3,62	0/0:10,0:10:12.04:0,12,235	./.	./.	./.
chr10	283510	.	TA	T	1234.39	PASS	AC=4;AF=0.080;AN=50;BaseQRankSum=6.982;DP=297;FS=32.053;HRun=3;HaplotypeScore=35.4736;InbreedingCoeff=0.7282;MQ=67.16;MQ0=6;MQRankSum=-1.169;QD=22.44;ReadPosRankSum=1.465;VQSLOD=1.6037;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,22:27:62.26:705,62,0	0/0:10,0:10:30.10:0,30,400	0/0:14,0:5:9.03:0,9,119	0/0:9,0:8:13.01:0,13,125	0/0:22,0:22:60.13:0,60,726	0/0:14,0:14:39.11:0,39,492	0/0:9,0:7:11.01:0,11,195	./.	0/0:9,0:9:27.09:0,27,360	0/0:11,0:11:30.10:0,30,399	0/0:13,0:13:36.11:0,36,468	0/0:7,0:7:18.02:0,18,206	0/0:9,0:10:24.07:0,24,299	0/0:6,0:6:18.05:0,18,216	0/0:11,0:11:33.11:0,33,440	0/0:13,0:13:36.11:0,36,466	1/1:3,25:28:38.58:647,39,0	0/0:11,0:10:32.78:0,33,411	0/0:18,0:17:51.12:0,51,650	0/0:15,0:15:45.13:0,45,580	0/0:10,0:10:21.04:0,21,250	0/0:1,0:1:3.01:0,3,40	0/0:9,0:9:21.05:0,21,252	0/0:2,0:2:2.97:0,3,20	0/0:16,0:16:45.15:0,45,600	0/0:1,0:1:3.01:0,3,40	./.	./.
chr10	287981	.	AAC	A	527.77	PASS	AB=0.858;AC=24;AF=0.600;AN=40;BaseQRankSum=1.945;DP=537;FS=0.000;HRun=0;HaplotypeScore=69.9482;InbreedingCoeff=0.4164;MQ=38.45;MQ0=112;MQRankSum=0.983;QD=2.14;ReadPosRankSum=0.064;VQSLOD=1.5461;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:38:14.98:0,15,138	1/1:6,1:7:3.01:32,3,0	./.	./.	./.	1/1:16,0:16:5.68:28,6,0	1/1:20,2:17:5.85:46,6,0	./.	0/0:22,0:21:3.01:0,3,44	0/0:25,0:19:7.26:0,7,73	0/0:12,0:9:3.01:0,3,44	./.	1/1:12,2:10:2.68:32,3,0	1/1:14,1:13:3.01:32,3,0	1/1:15,2:15:5.81:46,6,0	0/1:19,3:21:32:49,0,32	0/0:43,0:43:20.45:0,20,294	0/1:14,2:14:43.26:43,0,168	1/1:8,1:7:3.01:32,3,0	1/1:11,1:11:3.01:32,3,0	1/1:35,2:30:5.71:46,6,0	./.	0/0:17,0:14:5.98:0,6,64	1/1:25,6:27:17.88:175,18,0	1/1:17,2:20:8.85:78,9,0	0/0:7,0:6:14.99:0,15,144	./.	./.
chr10	294158	.	T	TACC	635.71	PASS	AB=1.000;AC=5;AF=0.227;AN=22;BaseQRankSum=1.779;DP=668;FS=6.761;HRun=0;HaplotypeScore=18.2840;InbreedingCoeff=0.4624;MQ=20.22;MQ0=409;MQRankSum=1.287;QD=6.55;ReadPosRankSum=-0.465;VQSLOD=0.3974;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,27:32:27.09:611,27,0	./.	0/0:29,0:1:3.01:0,3,47	0/0:33,0:2:4.56:0,5,43	./.	./.	0/0:22,0:6:6.49:0,6,101	./.	1/1:25,11:14:6.02:115,6,0	0/0:26,0:1:3.01:0,3,50	./.	./.	0/1:21,0:6:0.01:0,0,0	./.	./.	./.	0/0:35,0:24:3.01:0,3,50	0/0:24,0:11:3.01:0,3,50	0/0:21,0:6:18.06:0,18,294	./.	0/0:46,0:19:0:0,0,0	./.	./.	./.	./.	./.	./.	./.
chr10	296522	.	GTCACCTCT	G	156.92	PASS	AB=0.765;AC=1;AF=0.021;AN=48;BaseQRankSum=2.481;DP=498;FS=6.033;HRun=0;HaplotypeScore=77.1207;InbreedingCoeff=-0.0323;MQ=38.98;MQ0=168;MQRankSum=-2.580;QD=6.04;ReadPosRankSum=0.011;VQSLOD=0.8543;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:18,8:11:99:231,0,505	0/0:8,0:5:15.05:0,15,655	0/0:24,0:4:11.79:0,12,209	0/0:21,0:2:6.01:0,6,69	0/0:22,0:14:33.11:0,33,1425	0/0:26,0:20:45.15:0,45,1793	0/0:14,0:10:27.09:0,27,1185	./.	0/0:18,0:11:33.11:0,33,1449	0/0:27,0:17:51.18:0,51,2240	0/0:21,0:14:39.13:0,39,1709	0/0:17,0:13:36.12:0,36,1544	0/0:20,0:15:38.66:0,39,1601	0/0:14,0:12:33.11:0,33,1448	0/0:16,0:14:42.10:0,42,1731	0/0:21,0:13:33.11:0,33,1415	./.	0/0:25,0:20:54.19:0,54,2367	0/0:27,0:13:39.13:0,39,1714	0/0:25,0:15:42.14:0,42,1819	0/0:24,0:17:45.15:0,45,1920	0/0:23,0:16:45.15:0,45,1887	0/0:21,0:14:42.14:0,42,1811	0/0:15,0:10:24.08:0,24,942	0/0:17,0:11:33.11:0,33,1449	0/0:9,0:5:6.02:0,6,240	./.	./.
chr10	298786	.	CT	C	877.99	PASS	AB=0.957;AC=5;AF=0.100;AN=50;BaseQRankSum=4.581;DP=420;FS=0.584;HRun=12;HaplotypeScore=45.6590;InbreedingCoeff=0.6042;MQ=59.89;MQ0=36;MQRankSum=2.840;QD=9.98;ReadPosRankSum=0.637;VQSLOD=2.2277;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,33:36:73.74:563,74,0	0/0:14,1:14:9.88:0,10,277	0/0:26,0:9:8.13:0,8,111	0/1:21,1:13:6.53:7,0,116	0/0:19,0:17:38.95:0,39,381	0/0:22,0:19:44.30:0,44,433	0/0:13,3:15:9.83:0,10,281	./.	0/0:16,0:16:36.96:0,37,366	0/0:33,1:29:29.07:0,29,513	0/0:9,0:9:27.05:0,27,274	0/0:9,0:10:23.87:0,24,221	0/0:8,0:7:11.86:0,12,103	0/0:5,0:3:6.01:0,6,61	0/0:11,0:11:27.01:0,27,262	0/0:10,0:10:30.05:0,30,300	1/1:5,21:27:58.33:431,58,0	0/0:16,1:16:17.07:0,17,336	0/0:15,0:14:35.86:0,36,333	0/0:18,0:19:44.50:0,44,399	0/0:10,1:12:6.54:0,7,206	0/0:12,0:12:23.22:0,23,252	0/0:15,0:13:25.40:0,25,249	0/0:12,0:12:32.96:0,33,308	0/0:17,1:15:6.72:0,7,218	0/0:2,0:2:3.01:0,3,30	./.	./.
chr10	301880	.	GC	G	478.43	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=5.482;DP=581;FS=27.692;HRun=2;HaplotypeScore=58.9017;InbreedingCoeff=0.9521;MQ=56.41;MQ0=16;MQRankSum=-6.046;QD=17.72;ReadPosRankSum=1.143;VQSLOD=2.2162;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,9:7:12.04:151,12,0	0/0:4,0:4:9.03:0,9,135	0/0:39,0:28:75.21:0,75,1059	0/0:31,0:23:43.81:0,44,720	0/0:28,0:27:66.21:0,66,951	0/0:18,1:18:39.04:0,39,515	0/0:19,0:18:36.12:0,36,527	0/0:25,1:23:66.22:0,66,983	1/1:0,11:9:24.08:307,24,0	0/0:30,0:29:81.26:0,81,1193	0/0:12,0:12:21.06:0,21,294	0/0:17,1:17:42.14:0,42,628	0/0:31,0:31:75.09:0,75,1071	0/0:19,2:19:42.04:0,42,626	0/0:15,2:15:42.14:0,42,629	0/0:20,0:20:48.16:0,48,708	1/1:0,5:5:12.04:156,12,0	0/0:19,0:19:42.14:0,42,629	0/0:22,0:17:51.17:0,51,764	0/0:27,0:25:57.15:0,57,793	0/0:20,0:19:51.16:0,51,740	0/0:15,1:15:36.08:0,36,512	0/0:14,0:13:33.08:0,33,470	0/0:29,0:29:84.24:0,84,1220	0/0:27,0:27:66.13:0,66,902	0/0:20,0:20:60.18:0,60,861	0/0:34,3:34:84.28:0,84,1228	0/0:8,0:8:18.06:0,18,270
chr10	306311	.	C	CA	2320.06	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=-2.300;DP=491;FS=14.071;HRun=3;HaplotypeScore=46.8642;InbreedingCoeff=0.8701;MQ=58.54;MQ0=2;MQRankSum=0.983;QD=28.29;ReadPosRankSum=2.239;VQSLOD=1.8324;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,33:36:87.29:1214,87,0	0/0:10,0:10:30.09:0,30,360	0/0:23,0:13:30.09:0,30,356	0/0:21,0:17:47.73:0,48,546	0/0:24,0:24:66.20:0,66,784	0/0:11,0:11:33.10:0,33,396	0/0:13,0:13:39.12:0,39,467	0/0:32,0:31:84.25:0,84,997	1/1:1,12:13:36.12:504,36,0	0/0:15,0:15:45.13:0,45,529	0/0:19,0:19:51.14:0,51,597	0/0:12,0:12:36.11:0,36,431	0/0:13,0:13:39.12:0,39,468	0/0:13,0:13:39.12:0,39,468	0/0:15,0:15:42.13:0,42,504	0/1:13,0:13:5.16:5,0,359	1/1:1,19:20:54.18:742,54,0	0/0:9,0:10:24.92:0,25,274	0/0:19,0:18:57.12:0,57,639	0/0:16,0:16:45.14:0,45,537	0/0:15,0:15:45.14:0,45,539	0/0:16,0:16:48.15:0,48,572	0/0:19,0:19:54.16:0,54,647	0/0:18,0:18:51.02:0,51,591	0/0:19,0:19:57.17:0,57,682	0/0:18,0:18:54.15:0,54,634	0/0:25,0:25:72.22:0,72,858	0/0:13,0:13:36.11:0,36,432
chr10	307985	.	AG	A	6679.40	PASS	AB=1.000;AC=53;AF=0.946;AN=56;BaseQRankSum=-0.406;DP=373;FS=5.253;HRun=1;HaplotypeScore=124.4195;InbreedingCoeff=0.2341;MQ=38.70;MQ0=1;MQRankSum=-1.721;QD=18.00;ReadPosRankSum=1.633;VQSLOD=5.1549;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,5:6:14.98:122,15,0	1/1:1,9:10:26.80:199,27,0	1/1:7,0:7:12.84:98,13,0	0/1:12,0:10:16.89:73,0,17	1/1:6,15:21:51.37:368,51,0	1/1:1,19:20:51.70:399,52,0	1/1:2,4:6:11.90:88,12,0	1/1:3,9:10:21.31:134,21,0	1/1:2,19:21:54.52:406,55,0	1/1:0,19:18:53.54:373,54,0	1/1:1,19:20:50.67:394,51,0	1/1:0,9:9:24.76:184,25,0	1/1:3,13:16:44.73:344,45,0	1/1:1,7:8:18.85:147,19,0	1/1:0,7:7:14.50:89,14,0	1/1:1,12:12:31.10:232,31,0	1/1:1,9:10:24.64:171,25,0	1/1:0,8:8:17.90:131,18,0	1/1:1,9:9:23.44:157,23,0	1/1:0,35:35:98.54:768,99,0	0/0:2,0:2:0:0,0,0	1/1:4,22:26:57.75:425,58,0	1/1:0,29:29:68.56:526,69,0	1/1:1,2:3:2.92:17,3,0	1/1:3,8:11:26.64:186,27,0	1/1:0,12:12:32.68:232,33,0	1/1:1,12:13:37.29:265,37,0	1/1:0,7:7:20.83:150,21,0
chr10	308147	.	TA	T	5015.90	PASS	AC=52;AF=1.000;AN=52;BaseQRankSum=1.815;DP=297;FS=11.278;HRun=1;HaplotypeScore=238.5410;InbreedingCoeff=-0.0203;MQ=27.93;MQ0=0;MQRankSum=0.212;QD=17.30;ReadPosRankSum=2.915;VQSLOD=3.3144;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,5:4:9.45:73,9,0	1/1:0,7:7:20.94:163,21,0	./.	./.	1/1:1,16:17:38.92:315,39,0	1/1:1,9:9:17.95:141,18,0	1/1:2,12:14:32.92:261,33,0	1/1:2,12:13:13.74:207,14,0	1/1:1,8:9:14.96:117,15,0	1/1:2,16:18:10.72:281,11,0	1/1:1,16:17:38.91:317,39,0	1/1:0,7:7:14.97:120,15,0	1/1:0,5:5:14.96:118,15,0	1/1:0,9:9:23.96:194,24,0	1/1:0,6:6:8.98:71,9,0	1/1:1,8:9:17.96:142,18,0	1/1:2,2:4:5.99:49,6,0	1/1:1,5:6:14.91:109,15,0	1/1:0,12:11:23.79:165,24,0	1/1:1,20:21:56.84:446,57,0	1/1:1,4:5:5.99:48,6,0	1/1:1,22:23:53.88:433,54,0	1/1:3,14:17:32.94:270,33,0	1/1:0,1:1:2.99:24,3,0	1/1:0,18:18:35.91:284,36,0	1/1:0,16:16:41.75:305,42,0	1/1:2,10:12:26.89:205,27,0	1/1:1,7:8:20.91:158,21,0
chr10	308151	.	AC	A	5141.36	PASS	AC=54;AF=1.000;AN=54;DP=283;FS=0.000;HRun=1;HaplotypeScore=218.8948;InbreedingCoeff=-0.0103;MQ=28.85;MQ0=0;QD=18.43;VQSLOD=4.5945;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,5:5:9.40:67,9,0	1/1:0,7:7:20.88:157,21,0	1/1:4,0:1:3:25,3,0	./.	1/1:0,16:16:38.77:301,39,0	1/1:0,9:8:17.93:139,18,0	1/1:2,12:14:38.62:281,39,0	1/1:0,12:12:32.77:237,33,0	1/1:0,8:8:14.91:112,15,0	1/1:0,16:16:44.76:337,45,0	1/1:0,16:16:38.80:305,39,0	1/1:0,7:7:14.98:122,15,0	1/1:0,5:5:14.94:116,15,0	1/1:0,9:9:23.98:198,24,0	1/1:0,6:6:8.94:67,9,0	1/1:0,8:8:17.98:147,18,0	1/1:0,2:2:5.95:43,6,0	1/1:0,5:5:14.89:107,15,0	1/1:0,13:12:26.82:193,27,0	1/1:1,20:21:59.75:474,60,0	1/1:0,4:4:5.95:42,6,0	1/1:1,22:23:56.75:446,57,0	1/1:0,14:14:32.82:253,33,0	1/1:0,1:1:2.94:18,3,0	1/1:0,18:18:35.73:268,36,0	1/1:1,16:17:41.83:320,42,0	1/1:1,10:11:26.88:211,27,0	1/1:0,7:7:20.86:154,21,0
chr10	309272	.	CAG	C	1415.69	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.994;DP=512;FS=1.383;HRun=0;HaplotypeScore=61.9309;InbreedingCoeff=0.9612;MQ=59.43;MQ0=2;MQRankSum=-1.568;QD=30.12;ReadPosRankSum=1.811;VQSLOD=5.2873;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,26:29:18.87:961,19,0	0/0:3,0:3:9.03:0,9,168	0/0:23,0:21:63.21:0,63,1129	0/0:16,0:13:38.87:0,39,658	0/0:29,0:29:78.27:0,78,1460	0/0:24,0:24:72.23:0,72,1307	0/0:9,0:9:21.05:0,21,361	0/0:38,0:34:96.29:0,96,1732	0/0:18,0:18:54.17:0,54,971	0/0:29,0:29:84.28:0,84,1547	0/0:27,0:27:81.28:0,81,1516	0/0:7,0:7:21.06:0,21,362	0/0:14,0:14:42.13:0,42,742	0/0:13,0:13:39.13:0,39,712	0/0:10,0:10:30.10:0,30,547	0/0:14,0:14:42.14:0,42,768	1/1:3,15:18:39.13:574,39,0	0/0:18,0:18:54.14:0,54,972	0/0:17,0:16:42.56:0,43,714	0/0:31,0:31:90.29:0,90,1654	0/0:17,0:17:51.17:0,51,946	0/0:10,0:10:27.09:0,27,505	0/0:22,0:22:63.22:0,63,1179	0/0:14,0:14:36.06:0,36,600	0/0:11,0:11:30.10:0,30,562	0/0:29,0:29:84.28:0,84,1530	0/0:14,0:14:42.14:0,42,760	0/0:8,0:8:24.08:0,24,449
chr10	309855	.	CCA	C	34.20	PASS	AB=0.908;AC=9;AF=0.196;AN=46;BaseQRankSum=1.644;DP=479;FS=2.937;HRun=0;HaplotypeScore=71.3392;InbreedingCoeff=0.0213;MQ=53.52;MQ0=42;MQRankSum=-0.553;QD=0.36;ReadPosRankSum=-1.098;VQSLOD=1.2085;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:39:17.69:0,18,286	0/0:5,0:5:3.01:0,3,40	./.	./.	0/0:25,0:25:3.01:0,3,41	0/0:17,0:15:6.01:0,6,65	0/1:17,0:15:4.65:5,0,136	./.	0/1:22,0:20:2.19:2,0,48	./.	0/0:17,0:17:5.99:0,6,48	0/1:9,0:8:28:28,0,107	0/0:7,0:6:3.01:0,3,44	0/0:13,0:12:15.48:0,15,160	0/0:14,0:12:5.99:0,6,49	0/0:6,0:6:6.02:0,6,87	0/0:23,0:23:0.07:0,0,42	0/0:12,0:8:8.96:0,9,105	0/0:14,0:13:2.97:0,3,20	0/0:14,0:14:8.99:0,9,83	./.	0/0:13,0:12:12:0,12,134	0/0:18,0:18:12:0,12,130	0/1:16,4:17:25.53:26,0,38	0/0:28,0:28:21.93:0,22,266	1/1:10,2:12:3:32,3,0	1/1:11,0:10:3.01:32,3,0	0/1:3,1:3:25.51:26,0,34
chr10	310525	.	CT	C	1266.11	PASS	AB=0.920;AC=9;AF=0.161;AN=56;BaseQRankSum=5.156;DP=513;FS=0.000;HRun=11;HaplotypeScore=60.5731;InbreedingCoeff=0.6015;MQ=74.00;MQ0=3;MQRankSum=-0.210;QD=7.67;ReadPosRankSum=2.653;VQSLOD=1.8878;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,23:27:66.99:529,67,0	0/0:8,0:8:18.05:0,18,192	0/1:36,4:23:50.55:51,0,161	0/1:35,0:14:9.67:10,0,126	0/0:28,0:28:63.08:0,63,640	0/0:14,0:15:32.91:0,33,328	0/0:16,2:17:20.45:0,20,414	0/0:23,0:24:53.84:0,54,523	1/1:3,16:19:47.31:378,47,0	0/0:17,0:17:39.09:0,39,410	0/0:23,1:26:41.16:0,41,597	0/0:12,0:12:27.04:0,27,273	0/0:16,0:16:42.09:0,42,441	0/0:13,0:14:32.90:0,33,320	0/0:6,0:6:18.05:0,18,192	0/1:14,3:17:16.24:16,0,238	1/1:5,21:26:53.92:441,54,0	0/0:7,0:7:21.04:0,21,216	0/0:15,0:13:33.02:0,33,337	0/0:22,1:23:29.49:0,29,519	0/0:9,0:11:26.94:0,27,271	0/0:17,0:17:42.58:0,43,448	0/0:13,1:15:17.26:0,17,362	0/0:13,0:13:30.06:0,30,313	0/0:13,0:14:35.96:0,36,365	0/0:23,2:25:29.48:0,29,513	0/0:19,0:19:45.05:0,45,459	0/0:5,0:5:12.03:0,12,128
chr10	313597	.	AAGTATGTT	A	187.73	PASS	AC=6;AF=0.111;AN=54;BaseQRankSum=3.243;DP=329;FS=15.326;HRun=0;HaplotypeScore=46.5772;InbreedingCoeff=0.5419;MQ=40.24;MQ0=125;MQRankSum=-2.519;QD=20.86;ReadPosRankSum=1.161;VQSLOD=0.9862;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,1:1:3.01:74,3,0	0/0:11,0:11:24.08:0,24,1098	./.	0/0:13,0:3:8.90:0,9,106	0/0:13,0:6:15.05:0,15,690	0/0:15,0:13:21.07:0,21,925	0/0:10,0:6:15.05:0,15,689	0/0:19,0:5:15.05:0,15,695	1/1:1,3:3:6.02:149,6,0	0/0:16,0:10:30.10:0,30,1386	0/0:10,0:8:9.03:0,9,416	0/0:7,0:3:2.97:0,3,20	0/0:12,0:10:27.05:0,27,1117	0/0:8,0:8:18.02:0,18,699	0/0:14,0:10:14.95:0,15,693	0/0:12,0:5:9.03:0,9,416	1/1:1,1:2:3.01:74,3,0	0/0:7,0:5:6.02:0,6,277	0/0:23,0:16:48.16:0,48,2152	0/0:10,0:8:21.07:0,21,959	0/0:18,0:7:9.03:0,9,416	0/0:9,0:8:3.01:0,3,41	0/0:15,0:10:3.01:0,3,118	0/0:17,0:12:21.07:0,21,870	0/0:11,0:9:27.09:0,27,1182	0/0:14,0:10:30.10:0,30,1365	0/0:15,0:8:14.91:0,15,666	0/0:3,0:3:9.03:0,9,396
chr10	313771	.	C	CATAA	610.82	PASS	AB=1.000;AC=15;AF=0.577;AN=26;BaseQRankSum=0.465;DP=198;FS=1.485;HRun=0;HaplotypeScore=30.6139;InbreedingCoeff=0.4469;MQ=46.26;MQ0=14;MQRankSum=-1.705;QD=12.22;ReadPosRankSum=0.155;VQSLOD=2.3897;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:8:6.02:0,6,91	1/1:1,0:1:3.01:44,3,0	./.	./.	./.	1/1:8,1:11:9.03:186,9,0	./.	./.	0/0:6,0:4:3.01:0,3,45	1/1:11,0:11:6.02:119,6,0	./.	./.	./.	./.	1/1:4,1:5:3.01:69,3,0	1/1:3,3:6:6.02:139,6,0	0/0:14,0:12:12.04:0,12,182	0/1:5,0:5:46.65:47,0,82	./.	./.	./.	./.	1/1:3,0:3:3.01:69,3,0	./.	1/1:6,0:6:3.01:52,3,0	./.	0/0:12,0:12:15.05:0,15,227	0/0:9,0:9:9.03:0,9,136
chr10	314540	.	C	CT	1507.75	PASS	AB=0.967;AC=8;AF=0.143;AN=56;BaseQRankSum=6.371;DP=534;FS=15.131;HRun=7;HaplotypeScore=51.9520;InbreedingCoeff=0.7764;MQ=43.37;MQ0=6;MQRankSum=-0.256;QD=16.75;ReadPosRankSum=-0.024;VQSLOD=1.9888;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,14:15:36.07:418,36,0	0/0:8,0:8:21.03:0,21,202	0/0:16,0:2:6.01:0,6,58	0/1:17,0:5:0.01:0,0,59	0/0:35,0:35:78.12:0,78,750	0/0:30,0:29:72.10:0,72,689	0/0:18,0:18:39.05:0,39,370	0/0:33,0:33:84.12:0,84,805	1/1:1,15:16:42.13:507,42,0	0/0:21,0:21:60.10:0,60,578	0/0:20,0:20:42.06:0,42,404	0/0:15,0:15:33.04:0,33,318	0/0:19,0:19:36.03:0,36,347	0/0:17,0:17:33.05:0,33,319	0/0:13,0:13:33.05:0,33,319	0/1:12,1:14:4.13:4,0,235	1/1:3,24:26:60.18:722,60,0	0/0:15,0:15:42.07:0,42,405	0/0:19,0:17:48.08:0,48,463	0/0:28,0:28:69.06:0,69,656	0/0:11,0:11:27.04:0,27,261	0/0:16,0:16:30.04:0,30,289	0/0:22,0:22:45.06:0,45,429	0/0:10,0:10:24.03:0,24,232	0/0:23,0:23:42.06:0,42,405	0/0:24,0:24:60.09:0,60,579	0/0:22,0:21:36.05:0,36,347	0/0:9,0:9:24.04:0,24,232
chr10	316254	.	T	TCTGG	1857.64	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-7.119;DP=382;FS=2.299;HRun=0;HaplotypeScore=59.0659;InbreedingCoeff=0.8897;MQ=65.77;MQ0=7;MQRankSum=0.924;QD=59.92;ReadPosRankSum=1.653;VQSLOD=5.0906;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,16:16:45.15:1187,45,0	0/0:2,0:2:6.02:0,6,110	0/0:22,0:12:21.07:0,21,383	0/0:28,0:18:37.68:0,38,612	0/0:6,0:6:15.05:0,15,276	0/0:14,0:14:42.14:0,42,773	0/0:14,0:14:39.13:0,39,717	0/0:20,0:20:42.14:0,42,770	0/0:11,0:11:33.11:0,33,597	0/0:11,0:11:30.10:0,30,551	0/0:6,0:5:15.05:0,15,276	0/0:5,0:5:12.04:0,12,221	0/0:9,0:9:27.09:0,27,497	0/0:5,0:5:15.04:0,15,246	0/0:10,0:10:30.10:0,30,552	0/0:8,0:8:21.07:0,21,386	1/1:2,13:15:30.10:791,30,0	0/0:13,0:13:36.12:0,36,662	0/0:14,0:13:36.12:0,36,661	0/0:10,0:10:30.10:0,30,550	0/0:52,0:52:99:0,123,2256	0/0:7,0:7:18.06:0,18,331	0/0:12,0:12:36.11:0,36,632	0/0:29,0:29:78.27:0,78,1435	0/0:11,0:11:30.07:0,30,552	0/0:10,0:10:24.07:0,24,413	0/0:18,0:18:48.15:0,48,845	0/0:4,0:4:12.04:0,12,221
chr10	316459	.	GA	G	745.85	PASS	AB=0.941;AC=7;AF=0.125;AN=56;BaseQRankSum=7.853;DP=345;FS=13.259;HRun=6;HaplotypeScore=31.9195;InbreedingCoeff=0.7772;MQ=58.18;MQ0=22;MQRankSum=0.303;QD=15.22;ReadPosRankSum=-0.242;VQSLOD=1.5149;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,17:15:39.10:418,39,0	0/0:6,0:6:15.05:0,15,197	0/1:15,0:3:18.34:23,0,18	0/0:11,0:1:0.89:0,1,2	0/0:15,0:15:45.15:0,45,592	0/0:13,0:13:24.08:0,24,315	0/0:9,0:8:11.38:0,11,157	0/0:15,0:13:39.07:0,39,490	1/1:0,8:8:21.05:226,21,0	0/0:16,0:16:45.15:0,45,592	0/0:13,0:13:30.10:0,30,394	0/0:7,0:7:21.05:0,21,259	0/0:6,0:6:18.06:0,18,237	0/0:12,0:11:30.08:0,30,366	0/0:11,0:11:26.65:0,27,355	0/0:6,0:6:12.04:0,12,158	1/1:1,7:8:21.05:226,21,0	0/0:24,0:24:66.20:0,66,850	0/0:17,0:15:42.14:0,42,551	0/0:23,0:23:69.21:0,69,892	0/0:12,0:12:33.11:0,33,434	0/0:9,0:9:24.08:0,24,316	0/0:11,0:11:33.11:0,33,431	0/0:14,0:14:33.11:0,33,433	0/0:8,0:8:21.07:0,21,275	0/0:10,0:10:27.09:0,27,354	0/0:12,0:12:36.12:0,36,473	0/0:15,0:15:44.88:0,45,565
chr10	317496	.	ATAGT	A	2365.09	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.667;DP=560;FS=0.000;HRun=0;HaplotypeScore=92.4263;InbreedingCoeff=0.9936;MQ=87.63;MQ0=0;MQRankSum=-4.371;QD=44.62;ReadPosRankSum=3.983;VQSLOD=4.1785;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,31:34:87.30:1633,87,0	0/0:7,0:7:21.04:0,21,484	0/0:28,0:27:62.88:0,63,1560	0/0:31,0:31:83.09:0,83,1976	0/0:21,0:21:60.21:0,60,1554	0/0:17,0:17:51.18:0,51,1348	0/0:20,0:20:57.20:0,57,1487	0/0:27,0:27:78.27:0,78,2096	0/0:28,0:28:84.29:0,84,2235	0/0:24,0:24:69.24:0,69,1854	0/0:22,0:22:63.22:0,63,1648	0/0:13,0:13:39.13:0,39,1052	0/0:6,0:6:18.06:0,18,478	0/0:15,0:15:45.14:0,45,1097	0/0:13,0:13:39.13:0,39,1053	0/0:15,0:15:45.15:0,45,1200	1/1:1,18:19:44.87:854,45,0	0/0:15,0:15:45.15:0,45,1190	0/0:17,0:17:48.16:0,48,1289	0/0:23,0:23:66.23:0,66,1774	0/0:24,0:24:69.22:0,69,1767	0/0:25,0:25:66.23:0,66,1711	0/0:17,0:17:42.14:0,42,1133	0/0:27,0:27:78.27:0,78,1991	0/0:14,0:14:42.14:0,42,1120	0/0:28,0:28:78.24:0,78,2045	0/0:16,0:16:42.14:0,42,1111	0/0:14,0:14:42.14:0,42,1103
chr10	318876	.	C	CA	636.47	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=0.024;DP=549;FS=4.231;HRun=4;HaplotypeScore=87.1424;InbreedingCoeff=0.9798;MQ=52.09;MQ0=6;MQRankSum=-0.315;QD=18.72;ReadPosRankSum=1.232;VQSLOD=3.1183;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,19:21:48.16:655,48,0	0/0:7,0:7:21.06:0,21,238	0/0:25,0:14:33.08:0,33,366	0/0:24,0:15:29.57:0,30,398	0/0:28,0:28:72.20:0,72,816	0/0:20,0:20:57.15:0,57,635	0/0:11,0:11:33.08:0,33,365	0/0:19,0:19:48.14:0,48,544	0/0:24,0:24:63.16:0,63,705	0/0:25,0:25:66.19:0,66,748	0/0:24,0:24:63.16:0,63,704	0/0:15,0:15:42.12:0,42,476	0/0:20,0:20:54.15:0,54,612	0/0:14,0:14:42.12:0,42,476	0/0:17,0:17:51.15:0,51,578	0/0:11,0:11:30.08:0,30,340	1/1:0,0:13:11.88:97,12,0	0/0:17,0:17:45.11:0,45,499	0/0:16,0:15:42.11:0,42,468	0/0:30,0:30:81.23:0,81,919	0/0:18,0:18:51.15:0,51,578	0/0:20,0:20:57.16:0,57,646	0/0:31,0:31:78.22:0,78,884	0/0:16,0:16:45.13:0,45,510	0/0:24,0:24:69.18:0,69,771	0/0:26,0:25:75.21:0,75,851	0/0:20,0:20:57.16:0,57,644	0/0:13,0:13:27.07:0,27,306
chr10	325698	.	T	TTAA	1497.67	PASS	AB=0.641;AC=4;AF=0.080;AN=50;BaseQRankSum=-4.555;DP=658;FS=2.774;HRun=0;HaplotypeScore=65.8152;InbreedingCoeff=0.4589;MQ=31.28;MQ0=226;MQRankSum=-2.015;QD=23.40;ReadPosRankSum=1.641;VQSLOD=3.3104;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:29:46.66:0,47,457	0/0:13,0:8:21.07:0,21,347	./.	./.	0/0:29,0:19:45.15:0,45,741	0/0:23,0:21:39.10:0,39,658	0/0:16,0:10:23.91:0,24,347	0/0:12,0:7:20.99:0,21,283	0/1:15,9:17:99:179,0,131	0/0:27,0:6:18.04:0,18,292	0/0:30,0:22:51.16:0,51,820	0/0:15,0:10:26.97:0,27,406	0/0:21,0:14:33.92:0,34,506	0/0:18,0:15:39:0,39,567	0/0:29,0:22:45.07:0,45,678	0/0:19,0:15:30.09:0,30,508	0/0:17,0:10:14.98:0,15,200	0/0:17,0:7:15.01:0,15,237	0/0:38,0:24:45.70:0,46,931	0/0:34,0:20:54.16:0,54,940	0/0:32,0:22:48.09:0,48,798	0/0:26,0:20:48.14:0,48,804	0/0:39,0:22:57.13:0,57,879	0/0:16,0:13:9.01:0,9,161	0/0:37,0:19:51.16:0,51,873	0/1:3,12:13:10.23:670,0,10	1/1:3,20:21:33.11:761,33,0	./.
chr10	327166	.	GATACATAC	G	861.88	PASS	AB=1.000;AC=12;AF=0.231;AN=52;BaseQRankSum=-1.975;DP=447;FS=1.786;HRun=0;HaplotypeScore=150.3317;InbreedingCoeff=0.4839;MQ=53.05;MQ0=12;MQRankSum=-0.532;QD=6.63;ReadPosRankSum=-6.047;VQSLOD=-0.1939;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:22:9.03:133,9,0	1/1:6,0:6:0.41:1,0,0	./.	./.	0/0:23,0:21:14.47:0,14,211	0/1:27,0:27:99:458,0,156	1/1:12,0:10:12.04:179,12,0	1/1:21,7:21:17.99:200,18,0	0/0:12,0:12:24.08:0,24,418	0/0:15,0:15:30.10:0,30,693	0/0:25,0:25:48.16:0,48,1390	0/0:10,0:10:11.54:0,12,365	0/0:14,0:14:13.03:0,13,414	1/1:7,0:7:0.32:1,0,0	0/0:9,0:9:7.44:0,7,194	0/0:14,0:14:21.06:0,21,388	0/0:26,0:24:21.32:0,21,277	0/0:20,0:20:20.43:0,20,399	0/0:21,0:19:8.45:0,8,125	0/0:23,0:23:5.37:0,5,121	0/0:18,0:18:14.43:0,14,225	0/0:12,0:12:1.81:0,2,164	0/0:23,0:23:11.98:0,12,361	0/0:9,0:9:8.50:0,9,261	0/0:12,0:12:9.97:0,10,261	0/1:28,0:28:29.92:30,0,574	0/0:23,0:23:16.56:0,17,511	0/0:5,0:5:0.97:0,1,103
chr10	327542	.	A	AT	434.73	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-3.445;DP=311;FS=13.372;HRun=8;HaplotypeScore=40.1881;InbreedingCoeff=0.8275;MQ=75.47;MQ0=0;MQRankSum=-1.280;QD=20.70;ReadPosRankSum=1.199;VQSLOD=2.4313;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,10:11:30.09:346,30,0	0/0:4,0:4:12.01:0,12,110	0/0:20,0:17:25.11:0,25,260	0/0:13,0:10:14.67:0,15,87	0/0:13,0:13:32.97:0,33,294	0/0:7,0:7:21.01:0,21,192	0/0:8,0:8:24.01:0,24,220	0/0:27,0:27:62.89:0,63,577	0/0:8,0:8:24.01:0,24,220	0/0:11,0:11:27.01:0,27,247	0/0:17,0:17:51.03:0,51,467	0/0:3,0:3:9:0,9,82	0/0:6,0:6:12:0,12,110	0/0:7,0:7:21.01:0,21,192	0/0:9,0:9:27.01:0,27,247	0/0:4,0:4:9:0,9,82	1/1:2,8:10:18.05:208,18,0	0/0:9,0:9:27.01:0,27,247	0/0:23,0:23:63:0,63,569	0/0:14,0:14:33.02:0,33,302	0/0:15,0:15:45.02:0,45,412	0/0:5,0:5:9:0,9,82	0/0:3,0:3:6:0,6,54	0/0:11,0:11:33.02:0,33,302	0/0:11,0:11:27.01:0,27,247	0/0:13,0:13:36.02:0,36,329	0/0:10,0:10:24.01:0,24,220	0/0:17,1:18:41.96:0,42,375
chr10	327582	.	TA	T	1141.57	PASS	AB=0.956;AC=13;AF=0.232;AN=56;BaseQRankSum=5.472;DP=267;FS=15.047;HRun=10;HaplotypeScore=37.2962;InbreedingCoeff=0.6263;MQ=85.62;MQ0=2;MQRankSum=0.720;QD=10.19;ReadPosRankSum=0.430;VQSLOD=0.6633;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:12:32.92:0,33,344	0/0:5,0:5:15.04:0,15,166	0/1:16,0:13:1.64:2,0,4	0/1:20,0:15:7.83:8,0,48	0/0:12,0:12:33.07:0,33,349	0/0:8,1:9:1.02:0,1,239	0/0:8,0:8:15.03:0,15,158	1/1:3,20:23:59.94:511,60,0	1/1:2,7:9:17.99:156,18,0	0/0:8,0:8:21.04:0,21,219	0/0:13,0:13:27.07:0,27,299	0/0:3,0:3:6.02:0,6,66	0/0:5,0:5:11.98:0,12,110	0/0:8,0:8:21.06:0,21,232	0/0:9,0:9:1.28:0,1,240	0/0:2,0:2:6:0,6,58	0/0:8,0:8:18:0,18,178	0/0:8,0:8:15.01:0,15,154	0/0:13,0:13:30.06:0,30,322	0/0:11,0:11:33.08:0,33,358	0/1:11,2:13:13:13,0,326	0/0:4,0:4:12.02:0,12,125	0/0:3,0:3:9.02:0,9,99	0/0:7,0:7:18.05:0,18,199	0/0:7,0:7:18.05:0,18,199	1/1:0,8:8:24:208,24,0	1/1:2,12:14:29.89:260,30,0	1/1:0,8:8:18:156,18,0
chr10	327684	.	CAT	C	320.95	PASS	AB=1.000;AC=21;AF=0.583;AN=36;BaseQRankSum=-3.327;DP=181;FS=3.900;HRun=0;HaplotypeScore=45.7902;InbreedingCoeff=0.4225;MQ=103.88;MQ0=5;MQRankSum=1.157;QD=4.52;ReadPosRankSum=0.673;VQSLOD=1.3558;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:8:2.64:0,3,25	1/1:1,0:2:2.84:14,3,0	0/0:22,0:8:6.46:0,6,63	0/1:40,0:20:19.29:19,0,101	./.	1/1:1,0:3:2.84:14,3,0	1/1:2,1:3:3.01:35,3,0	0/0:30,0:30:51.06:0,51,482	0/0:4,0:4:2.60:0,3,10	1/1:2,1:3:3.01:35,3,0	0/0:4,0:4:3.01:0,3,47	./.	1/1:3,0:3:3:25,3,0	./.	1/1:1,1:2:3.01:35,3,0	1/1:0,1:1:3.01:35,3,0	0/0:9,0:10:6:0,6,55	1/1:1,3:5:8.85:77,9,0	1/1:2,3:5:9.01:92,9,0	./.	./.	./.	./.	./.	1/1:2,2:3:6.02:70,6,0	./.	./.	0/0:10,0:16:23.99:0,24,210
chr10	328665	.	GCA	G	228.54	PASS	AB=0.968;AC=9;AF=0.161;AN=56;BaseQRankSum=2.547;DP=636;FS=0.829;HRun=0;HaplotypeScore=107.4503;InbreedingCoeff=0.0825;MQ=50.21;MQ0=23;MQRankSum=0.879;QD=1.21;ReadPosRankSum=-2.320;VQSLOD=1.4948;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:28,2:28:10.71:102,11,0	0/0:9,0:9:12.04:0,12,191	0/0:24,0:16:5.98:0,6,64	0/0:16,0:12:8.98:0,9,110	0/1:16,2:18:67.39:67,0,441	0/0:14,1:15:4.05:0,4,276	0/0:30,0:31:41.65:0,42,590	0/1:14,0:13:79.50:79,0,87	0/0:17,0:15:26.90:0,27,391	0/0:31,1:26:59.16:0,59,826	0/0:18,0:16:21.05:0,21,315	0/0:20,1:20:27.08:0,27,399	0/0:9,1:10:21.07:0,21,343	0/0:24,0:24:54.15:0,54,819	0/0:13,0:12:27.09:0,27,445	0/0:7,0:5:12.03:0,12,173	0/1:20,0:20:8.36:45,0,8	0/0:28,0:24:57.13:0,57,881	0/0:19,0:14:29.48:0,29,358	0/0:22,0:21:50.94:0,51,771	0/0:88,1:61:53.57:0,54,1240	0/0:31,0:26:42.13:0,42,648	0/1:12,2:14:50.46:50,0,261	0/1:52,0:49:0.56:1,0,1458	0/1:23,0:23:3.93:4,0,410	0/1:18,0:12:11.37:11,0,267	0/0:14,0:13:26.76:0,27,376	0/0:6,0:6:9.03:0,9,148
chr10	328705	.	ACG	A	124.04	PASS	AB=0.993;AC=12;AF=0.240;AN=50;BaseQRankSum=6.287;DP=526;FS=1.786;HRun=0;HaplotypeScore=78.8408;InbreedingCoeff=0.4394;MQ=41.98;MQ0=52;MQRankSum=-2.383;QD=1.05;ReadPosRankSum=-0.034;VQSLOD=1.6011;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:11,0:9:0:0,0,0	./.	./.	./.	0/0:17,0:15:29.42:0,29,458	0/0:6,0:5:8.99:0,9,112	0/0:38,0:33:54.06:0,54,885	0/0:5,0:1:2.97:0,3,20	1/1:13,0:11:0.39:60,0,0	0/1:33,1:23:9.50:10,0,650	0/0:8,0:6:11.61:0,12,131	0/0:20,0:13:13.81:0,14,270	0/0:10,0:9:17.21:0,17,177	0/0:21,1:19:39.12:0,39,655	0/0:7,0:4:12.04:0,12,229	0/0:6,0:6:14.26:0,14,232	1/1:7,0:4:2.15:6,2,0	0/0:20,1:20:34.94:0,35,729	0/0:24,0:11:33.05:0,33,487	0/0:11,0:9:24.01:0,24,365	0/0:122,2:82:99:0,123,2109	0/0:21,0:17:4.38:0,4,396	0/0:14,0:12:17.82:0,18,214	0/0:49,0:43:71.38:0,71,1477	0/1:20,0:17:6.14:6,0,190	1/1:18,1:9:17.95:132,18,0	0/1:7,0:6:8.01:8,0,67	1/1:6,0:5:5.84:34,6,0
chr10	328707	.	GCA	G	329.31	PASS	AB=0.636;AC=7;AF=0.146;AN=48;BaseQRankSum=2.744;DP=529;FS=5.401;HRun=0;HaplotypeScore=78.0070;InbreedingCoeff=0.6123;MQ=41.62;MQ0=53;MQRankSum=-2.235;QD=7.32;ReadPosRankSum=0.936;VQSLOD=2.4981;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:9:0.47:0,0,1	./.	./.	./.	0/0:18,0:15:27.09:0,27,429	0/0:7,0:5:6.02:0,6,101	0/0:39,0:33:54.13:0,54,870	./.	1/1:8,6:11:14.94:200,15,0	0/0:36,0:24:32.09:0,32,706	0/0:8,0:6:15.03:0,15,189	0/0:20,0:13:20.92:0,21,253	0/0:10,0:9:12.03:0,12,161	0/0:22,0:19:36.12:0,36,599	0/0:8,0:5:12.04:0,12,203	0/0:6,0:6:12.04:0,12,205	0/0:7,0:4:2.89:0,3,18	0/0:22,0:21:49.77:0,50,744	0/0:24,0:10:21.07:0,21,363	0/0:11,0:9:18.02:0,18,226	0/0:125,0:82:99:0,123,1978	0/0:22,0:18:29.67:0,30,472	0/0:12,0:10:12.02:0,12,176	0/0:48,0:42:81.65:0,82,1295	0/0:20,0:17:17.96:0,18,234	1/1:13,5:8:4.57:141,5,0	0/1:3,4:6:33.90:34,0,44	1/1:1,5:5:6.02:80,6,0
chr10	328725	.	ACG	A	107.66	PASS	AB=1.000;AC=6;AF=0.115;AN=52;BaseQRankSum=5.972;DP=550;FS=5.230;HRun=0;HaplotypeScore=80.6792;InbreedingCoeff=0.3863;MQ=40.05;MQ0=58;MQRankSum=-4.573;QD=2.20;ReadPosRankSum=-0.988;VQSLOD=1.2402;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:6,1:7:0.47:0,0,1	0/0:2,0:2:2.60:0,3,10	./.	./.	0/0:12,1:11:16.03:0,16,246	0/0:13,0:8:9.03:0,9,156	0/0:51,0:41:54.98:0,55,1038	1/1:4,3:3:9.03:137,9,0	0/0:16,0:13:21.24:0,21,245	0/0:31,1:20:8.15:0,8,528	0/0:7,0:5:9.03:0,9,167	0/0:19,0:12:14.98:0,15,219	0/0:7,1:7:8.61:0,9,102	0/0:24,1:21:35.67:0,36,589	0/0:8,0:4:9.03:0,9,163	0/0:9,0:7:11.94:0,12,154	1/1:8,2:4:3.44:46,3,0	0/0:25,0:23:17.31:0,17,650	0/0:22,0:10:28.99:0,29,322	0/0:6,0:4:9.02:0,9,134	0/0:130,0:92:99:0,127,1940	0/0:22,0:17:26.01:0,26,413	0/0:10,0:8:8.30:0,8,111	0/0:49,0:46:91.18:0,91,1605	0/0:19,1:17:3.34:0,3,102	0/1:24,0:14:31.49:31,0,174	0/1:8,0:6:2.35:2,0,106	0/0:6,0:4:5.95:0,6,50
chr10	328783	.	GCA	G	133.49	PASS	AB=0.955;AC=7;AF=0.140;AN=50;BaseQRankSum=3.562;DP=623;FS=6.620;HRun=0;HaplotypeScore=82.7323;InbreedingCoeff=0.6653;MQ=37.91;MQ0=69;MQRankSum=-4.345;QD=2.30;ReadPosRankSum=-0.298;VQSLOD=1.0064;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:20,1:14:0:0,0,0	./.	./.	./.	0/0:14,0:11:12.04:0,12,181	0/0:20,0:17:15.03:0,15,225	0/0:41,1:33:50.98:0,51,817	0/0:28,0:18:39.10:0,39,247	0/0:17,0:14:12:0,12,168	0/0:26,0:18:41.68:0,42,527	0/0:10,0:8:15.05:0,15,244	0/0:23,0:19:12.42:0,12,139	0/0:15,0:13:20.85:0,21,308	0/0:25,0:19:19.89:0,20,286	0/0:16,0:12:21.04:0,21,294	0/0:5,0:3:6.02:0,6,100	0/0:16,1:15:7.95:0,8,74	0/0:25,0:21:34.14:0,34,543	0/0:19,0:7:12.02:0,12,164	0/0:6,0:4:6.02:0,6,97	0/0:163,1:120:99:0,127,1922	0/0:20,0:20:29.57:0,30,397	0/0:13,0:10:9.02:0,9,127	0/0:42,0:36:66.18:0,66,1061	0/0:12,0:11:9.01:0,9,101	1/1:14,11:10:17.25:173,17,0	1/1:5,2:6:3.01:38,3,0	1/1:4,1:2:3.01:38,3,0
chr10	328799	.	ACACG	A	623.70	PASS	AB=0.955;AC=9;AF=0.188;AN=48;BaseQRankSum=7.650;DP=580;FS=19.198;HRun=0;HaplotypeScore=89.7692;InbreedingCoeff=0.6820;MQ=38.65;MQ0=61;MQRankSum=-6.250;QD=8.43;ReadPosRankSum=-0.951;VQSLOD=0.8254;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:20,0:15:0.10:0,0,0	./.	./.	./.	0/0:12,0:10:12.04:0,12,299	0/0:19,0:18:15.58:0,16,344	0/0:39,0:32:51.10:0,51,1139	1/1:13,16:21:42.11:629,42,0	0/0:14,0:11:8.75:0,9,87	0/0:25,0:19:23.94:0,24,742	0/0:7,0:5:9.03:0,9,233	0/0:19,0:16:17.97:0,18,303	0/0:15,0:13:14.93:0,15,324	0/0:21,0:16:20.84:0,21,416	0/0:18,0:10:20.89:0,21,471	0/0:4,0:4:6.02:0,6,148	1/1:13,3:14:7.71:99,8,0	0/0:25,0:21:44.21:0,44,1186	0/0:19,0:8:14.77:0,15,237	0/0:5,0:3:3.01:0,3,78	0/0:161,0:123:99:0,150,3115	0/0:20,0:18:21.66:0,22,512	0/0:12,0:9:9.03:0,9,232	0/0:43,0:35:66.08:0,66,1408	./.	0/0:16,0:8:9.85:0,10,93	1/1:5,0:4:3.63:14,4,0	1/1:3,0:2:0.47:1,0,0
chr10	328811	.	ACACACG	A	255.97	PASS	AB=1.000;AC=10;AF=0.208;AN=48;BaseQRankSum=4.300;DP=573;FS=4.753;HRun=0;HaplotypeScore=101.1484;InbreedingCoeff=0.6021;MQ=40.05;MQ0=51;MQRankSum=-3.521;QD=3.88;ReadPosRankSum=-0.254;VQSLOD=1.2783;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:19,0:14:0.11:0,0,0	./.	./.	./.	0/0:10,0:8:12.04:0,12,343	0/0:21,0:19:17.89:0,18,426	0/0:37,0:34:71.86:0,72,1577	0/0:23,0:16:1.68:0,2,92	1/1:11,3:11:5.34:29,5,0	0/0:30,0:23:50.28:0,50,941	0/0:7,0:5:12.04:0,12,331	0/0:19,0:15:18.05:0,18,383	0/0:11,0:9:12.04:0,12,315	0/0:24,0:18:18.06:0,18,422	0/0:18,0:11:23.65:0,24,664	0/0:6,0:6:12.04:0,12,318	0/1:13,0:11:9.42:9,0,18	0/0:28,0:23:57.15:0,57,1536	0/0:16,0:8:15.05:0,15,354	0/0:5,0:3:3.01:0,3,41	0/0:163,0:124:99:0,141,3651	0/0:19,0:17:26.75:0,27,755	0/0:13,0:10:15.05:0,15,331	0/0:43,0:35:60.13:0,60,1668	./.	1/1:11,1:7:9.50:148,10,0	1/1:2,3:4:6.02:132,6,0	1/1:2,1:2:3.01:66,3,0
chr10	328819	.	ACACG	A	190.27	PASS	AB=0.878;AC=10;AF=0.192;AN=52;BaseQRankSum=7.497;DP=576;FS=16.420;HRun=0;HaplotypeScore=83.4123;InbreedingCoeff=0.3957;MQ=40.50;MQ0=49;MQRankSum=-5.687;QD=2.29;ReadPosRankSum=-0.598;VQSLOD=0.4532;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:14,5:14:0.10:0,0,0	0/0:4,0:4:6:0,6,55	./.	./.	0/0:9,0:7:12.03:0,12,267	0/0:19,0:17:11.14:0,11,361	0/0:47,0:42:84.02:0,84,1844	1/1:18,0:12:0.76:99,1,0	1/1:12,0:9:0.52:17,1,0	0/0:34,0:27:21.28:0,21,1144	0/0:6,0:5:12.04:0,12,303	0/0:18,0:14:17.70:0,18,454	0/0:6,0:6:15.05:0,15,352	0/0:18,0:14:21.07:0,21,488	0/0:17,0:11:26.88:0,27,620	0/0:6,0:6:12.04:0,12,320	0/1:8,5:12:25.01:95,0,25	0/0:31,0:27:66.22:0,66,1453	0/0:19,0:7:20.81:0,21,423	0/0:7,0:6:2.93:0,3,48	0/0:158,0:114:99:0,163,3733	0/0:19,0:17:27.08:0,27,670	0/0:14,0:11:18.06:0,18,375	0/0:42,0:35:71.83:0,72,1723	0/0:6,0:6:0:0,0,0	0/1:13,0:8:4.04:31,0,4	0/1:5,0:5:5.06:43,0,5	1/1:3,0:2:3:26,3,0
chr10	330115	.	T	TGG	1147.21	PASS	AB=0.833;AC=25;AF=0.658;AN=38;BaseQRankSum=-2.778;DP=228;FS=9.787;HRun=0;HaplotypeScore=33.8247;InbreedingCoeff=0.3476;MQ=48.33;MQ0=80;MQRankSum=-0.293;QD=11.83;ReadPosRankSum=0.890;VQSLOD=1.6649;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:6:9.42:0,9,111	./.	0/0:37,0:9:3.17:0,3,107	0/0:32,0:5:2.99:0,3,24	1/1:4,1:3:8.98:78,9,0	1/1:8,1:6:18.01:176,18,0	./.	0/1:18,0:10:13.55:14,0,14	./.	1/1:6,0:1:3.01:40,3,0	1/1:2,1:1:3:29,3,0	./.	0/1:4,2:3:5.75:70,0,6	1/1:5,0:1:3.01:34,3,0	1/1:1,2:2:3.01:43,3,0	./.	0/0:18,0:14:30.31:0,30,299	0/1:8,2:10:30.08:207,0,30	0/0:5,0:1:3.01:0,3,42	1/1:3,0:2:5.97:45,6,0	./.	./.	./.	./.	1/1:8,0:5:15.01:149,15,0	1/1:6,0:4:12.01:126,12,0	1/1:1,3:3:9.03:115,9,0	1/1:9,0:6:17.97:156,18,0
chr10	330118	.	T	TGG	462.34	PASS	AB=1.000;AC=24;AF=0.571;AN=42;BaseQRankSum=-3.380;DP=231;FS=3.136;HRun=0;HaplotypeScore=34.2622;InbreedingCoeff=0.3517;MQ=48.24;MQ0=76;MQRankSum=-1.044;QD=4.40;ReadPosRankSum=-1.801;VQSLOD=1.2264;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,2:7:8.97:87,9,0	./.	0/0:37,0:9:14.97:0,15,150	0/0:31,0:5:0.94:0,1,1	1/1:6,0:4:5.74:46,6,0	0/1:9,0:6:7.60:8,0,29	./.	1/1:17,0:10:13.01:44,13,0	0/0:3,0:1:2.99:0,3,24	1/1:5,0:1:2.50:9,2,0	1/1:3,0:1:1.82:5,2,0	./.	0/1:6,0:3:8.72:19,0,9	1/1:5,0:1:2.96:19,3,0	1/1:3,0:2:0.47:1,0,0	0/0:2,0:1:0:0,0,0	1/1:13,3:14:20.20:264,20,0	0/0:14,0:11:8.35:0,8,132	0/0:5,0:1:3.01:0,3,38	1/1:3,0:2:0.49:13,0,0	./.	./.	./.	./.	0/1:9,0:6:1.53:2,0,26	1/1:5,0:4:10.38:70,10,0	0/1:3,0:3:5.77:6,0,7	0/0:10,0:6:16.29:0,16,71
chr10	330133	.	TTC	T	892.82	PASS	AB=1.000;AC=25;AF=0.658;AN=38;BaseQRankSum=-0.653;DP=183;FS=3.646;HRun=0;HaplotypeScore=29.4734;InbreedingCoeff=0.3900;MQ=31.38;MQ0=66;MQRankSum=1.006;QD=6.87;ReadPosRankSum=3.428;VQSLOD=2.0534;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:12,0:5:5.54:25,6,0	./.	0/0:8,0:1:2.99:0,3,23	./.	0/1:10,0:6:4.33:55,0,4	1/1:11,0:8:20.08:126,20,0	./.	1/1:6,5:7:4.30:65,4,0	1/1:4,0:3:5.53:43,6,0	0/0:5,0:1:1.55:0,2,4	./.	./.	0/0:4,0:1:0.47:0,0,1	0/0:4,0:1:1.82:0,2,5	./.	0/0:2,0:1:2.84:0,3,14	1/1:21,0:17:15.92:168,16,0	1/1:14,0:10:13.95:125,14,0	1/1:6,0:2:5.98:48,6,0	1/1:3,0:2:5.65:31,6,0	./.	./.	./.	1/1:8,0:3:2.92:17,3,0	1/1:8,0:6:1.23:17,1,0	1/1:7,0:6:17.82:128,18,0	0/0:1,0:1:1.82:0,2,5	1/1:15,0:11:8.52:152,9,0
chr10	331349	.	CCA	C	907.85	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.659;DP=625;FS=17.809;HRun=0;HaplotypeScore=72.3451;InbreedingCoeff=0.9995;MQ=86.03;MQ0=0;MQRankSum=-4.203;QD=43.23;ReadPosRankSum=-3.061;VQSLOD=2.4347;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:66.23:0,66,1323	0/0:19,0:19:57.17:0,57,1119	0/0:26,0:26:75.26:0,75,1491	0/0:17,0:17:32.75:0,33,851	0/0:31,0:31:90.30:0,90,1758	0/0:24,0:24:72.25:0,72,1448	0/0:24,0:24:69.23:0,69,1368	1/1:0,21:21:63.21:1003,63,0	0/0:23,0:23:69.24:0,69,1387	0/0:36,0:36:99:0,108,2111	0/0:24,0:24:69.24:0,69,1402	0/0:22,0:22:66.21:0,66,1304	0/0:18,0:18:54.19:0,54,1069	0/0:14,0:14:42.14:0,42,819	0/0:25,0:25:75.24:0,75,1454	0/0:21,0:21:63.20:0,63,1243	0/0:25,0:25:75.26:0,75,1511	0/0:20,0:20:60.11:0,60,1099	0/0:15,0:15:45.13:0,45,843	0/0:33,0:33:99:0,99,1996	0/0:19,0:19:57.20:0,57,1152	0/0:19,0:19:54.19:0,54,1073	0/0:37,0:37:99:0,108,2194	0/0:15,0:15:45.12:0,45,839	0/0:18,0:18:54.19:0,54,1087	0/0:15,0:15:45.15:0,45,873	0/0:29,0:28:87.26:0,87,1665	0/0:12,0:12:36.12:0,36,731
chr10	337043	.	T	TCG	156.74	PASS	AC=8;AF=0.80;AN=10;BaseQRankSum=-0.731;DP=19;FS=6.990;HRun=0;HaplotypeScore=8.6112;MQ=23.01;MQ0=6;MQRankSum=0.731;QD=17.42;ReadPosRankSum=0.731;VQSLOD=1.7592;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	1/1:0,1:1:3.01:60,3,0	./.	1/1:0,1:1:3.01:60,3,0	./.	./.	0/0:2,0:1:3.01:0,3,37	./.	1/1:3,1:1:3.01:60,3,0	./.	./.	1/1:1,2:2:3.01:49,3,0	./.	./.	./.	./.
chr10	341636	.	T	TG	155.33	PASS	AB=0.895;AC=11;AF=0.367;AN=30;BaseQRankSum=3.716;DP=470;FS=24.095;HRun=0;HaplotypeScore=15.0947;InbreedingCoeff=0.2442;MQ=16.05;MQ0=186;MQRankSum=-0.132;QD=1.59;ReadPosRankSum=2.135;VQSLOD=0.2702;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:6:6.02:0,6,84	./.	./.	./.	0/1:22,4:16:0:0,0,0	./.	./.	./.	./.	0/1:17,2:6:41.60:42,0,150	1/1:8,2:4:3:28,3,0	./.	./.	./.	1/1:11,1:4:3:27,3,0	0/0:15,0:6:3.01:0,3,42	./.	0/0:17,0:6:6.02:0,6,84	0/0:21,0:2:6.02:0,6,84	0/1:19,2:11:32.84:46,0,33	0/0:34,0:13:3.01:0,3,42	./.	0/0:11,1:6:0.47:0,0,1	0/0:23,0:9:3.01:0,3,42	0/0:14,0:7:6.02:0,6,84	1/1:6,2:2:6.01:60,6,0	./.	1/1:0,2:2:6.01:59,6,0
chr10	341872	.	TTA	T	2856.75	PASS	AB=0.678;AC=23;AF=0.442;AN=52;BaseQRankSum=10.291;DP=195;FS=14.674;HRun=0;HaplotypeScore=32.1668;InbreedingCoeff=-0.3032;MQ=57.21;MQ0=9;MQRankSum=-7.375;QD=17.63;ReadPosRankSum=0.248;VQSLOD=1.7407;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:12,5:16:99:187,0,474	1/1:0,1:1:3.01:48,3,0	0/0:4,0:3:5.98:0,6,48	0/0:2,0:1:2.97:0,3,20	0/1:3,3:6:99:118,0,163	0/1:9,3:12:99:105,0,445	0/1:2,4:6:75.71:171,0,76	1/1:0,8:8:21.07:335,21,0	0/0:4,0:4:12.04:0,12,242	0/1:3,4:7:99:171,0,157	0/0:11,0:11:29.91:0,30,475	0/1:4,2:5:79.24:79,0,167	1/1:0,2:2:6.02:94,6,0	0/1:3,2:5:78.69:79,0,126	0/1:2,2:4:82.25:82,0,108	0/1:4,3:7:99:120,0,216	0/1:20,9:28:99:297,0,1052	0/1:4,4:7:99:169,0,161	0/1:9,9:16:99:214,0,334	0/0:4,0:4:9.03:0,9,181	0/1:4,4:7:99:172,0,161	./.	0/0:3,0:2:6.02:0,6,111	0/1:1,3:4:51.46:88,0,51	0/0:5,0:3:8.99:0,9,139	0/1:1,9:10:30.57:391,0,31	./.	1/1:2,2:2:6.02:96,6,0
chr10	343725	.	TTTG	T	438.81	PASS	AB=1.000;AC=6;AF=0.120;AN=50;BaseQRankSum=6.234;DP=516;FS=16.755;HRun=0;HaplotypeScore=87.7364;InbreedingCoeff=0.3129;MQ=55.57;MQ0=3;MQRankSum=4.512;QD=3.57;ReadPosRankSum=-1.028;VQSLOD=0.1745;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:28:5.38:133,0,5	0/0:13,0:13:32.94:0,33,473	0/0:37,0:15:18.68:0,19,264	0/1:27,0:14:2.61:3,0,167	0/0:27,0:27:78.04:0,78,1230	0/0:19,0:19:54.14:0,54,923	0/0:18,0:18:51.07:0,51,838	./.	1/1:3,24:25:26.18:353,26,0	0/0:30,0:30:77.30:0,77,1213	0/0:29,0:29:78.10:0,78,1264	0/0:17,0:16:48.09:0,48,754	0/0:21,0:21:54.14:0,54,952	0/0:17,0:16:48.10:0,48,772	0/0:17,0:16:45.03:0,45,752	0/0:22,0:22:60.02:0,60,902	0/1:15,0:14:37.26:63,0,37	0/0:14,0:12:1.36:0,1,399	0/0:15,0:14:41.94:0,42,531	0/0:28,0:28:71.08:0,71,1029	0/0:22,0:22:59.13:0,59,959	0/1:25,0:25:0.22:0,0,529	0/0:17,0:17:45.01:0,45,628	0/0:13,0:13:36.08:0,36,635	0/0:16,0:16:45.12:0,45,755	0/0:1,0:1:3.01:0,3,60	./.	./.
chr10	344888	.	T	TAAAA	1943.76	PASS	AC=4;AF=0.083;AN=48;BaseQRankSum=-2.496;DP=430;FS=2.425;HRun=9;HaplotypeScore=87.0439;InbreedingCoeff=0.9823;MQ=77.80;MQ0=0;MQRankSum=-3.731;QD=44.18;ReadPosRankSum=-2.126;VQSLOD=2.7629;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:9,18:29:57.19:1305,57,0	0/0:9,0:9:24.06:0,24,326	0/0:16,0:15:20.85:0,21,255	0/0:17,0:15:15.34:0,15,307	0/0:29,0:29:75.22:0,75,1092	0/0:14,0:14:36.09:0,36,527	0/0:8,0:8:24.08:0,24,339	./.	0/0:12,0:12:36.11:0,36,508	0/0:36,0:36:99:0,99,1444	0/0:23,0:25:66.17:0,66,942	0/0:15,0:15:42.14:0,42,613	0/0:9,0:9:21.04:0,21,288	0/0:22,0:22:60.19:0,60,874	0/0:14,0:14:42.11:0,42,575	0/0:8,0:8:24.08:0,24,351	1/1:7,7:15:33.11:757,33,0	0/0:10,0:10:21.06:0,21,307	0/0:14,0:14:33.07:0,33,474	0/0:21,0:21:51.11:0,51,746	0/0:12,0:12:36.10:0,36,505	0/0:29,0:29:66.18:0,66,964	0/0:16,0:16:42.10:0,42,584	0/0:24,0:24:60.16:0,60,877	0/0:23,0:23:63.18:0,63,897	./.	./.	./.
chr10	349764	.	C	CTT	1406.86	PASS	AB=0.583;AC=3;AF=0.065;AN=46;BaseQRankSum=1.080;DP=469;FS=0.682;HRun=9;HaplotypeScore=61.5142;InbreedingCoeff=0.7025;MQ=56.97;MQ0=11;MQRankSum=4.453;QD=23.85;ReadPosRankSum=2.597;VQSLOD=2.8591;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,32:38:78.26:1168,78,0	./.	0/0:66,0:23:26.28:0,26,196	0/0:56,0:13:13:0,13,84	0/0:19,0:19:42.07:0,42,438	0/0:23,0:23:57.13:0,57,604	0/0:8,0:8:18.03:0,18,191	./.	0/0:16,0:16:38.55:0,39,387	0/0:17,0:17:44.82:0,45,471	0/0:11,0:11:25.30:0,25,256	0/0:14,0:13:33.07:0,33,349	0/0:12,0:12:27:0,27,272	0/0:8,0:8:17.40:0,17,166	0/0:8,0:8:12.01:0,12,128	0/0:10,0:9:15.03:0,15,159	0/1:6,15:20:4.89:342,0,5	0/0:11,0:11:24.04:0,24,254	0/0:28,0:26:54.04:0,54,556	0/0:30,0:27:53.60:0,54,527	0/0:10,0:10:30.07:0,30,319	0/0:14,0:14:26.98:0,27,270	0/0:17,0:17:33.05:0,33,349	0/0:11,0:11:24.04:0,24,255	0/0:15,0:15:33.02:0,33,335	./.	./.	./.
chr10	367306	.	AAG	A	137.22	PASS	AB=0.921;AC=12;AF=0.250;AN=48;BaseQRankSum=2.205;DP=564;FS=3.253;HRun=0;HaplotypeScore=86.2077;InbreedingCoeff=-0.0764;MQ=50.57;MQ0=20;MQRankSum=0.593;QD=0.74;ReadPosRankSum=-0.233;VQSLOD=1.6639;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	0/0:12,1:13:3.08:0,3,141	./.	./.	0/0:22,0:22:23.79:0,24,307	0/0:25,0:22:18.02:0,18,226	0/0:22,0:20:14.98:0,15,177	./.	0/1:16,0:22:2.50:2,0,99	0/1:20,2:20:23.73:24,0,57	1/1:9,4:12:2.97:20,3,0	0/0:18,0:18:18.06:0,18,254	0/1:18,0:16:8.11:8,0,39	0/0:15,3:18:9.01:0,9,111	0/1:19,2:20:17.73:18,0,145	0/0:23,1:24:3.01:0,3,37	1/1:4,0:4:5.68:28,6,0	0/0:11,0:13:3.01:0,3,39	0/0:12,0:10:4.08:0,4,129	0/0:33,2:33:6.35:0,6,645	0/0:23,0:20:11.06:0,11,200	0/1:19,1:20:11.69:12,0,227	0/1:20,1:18:11.68:12,0,213	0/0:22,0:20:5.74:0,6,60	0/0:15,2:16:0.86:0,1,135	0/1:24,1:23:61.08:61,0,225	0/0:24,2:25:18:0,18,237	0/1:11,0:9:71.59:83,0,72
chr10	368900	.	ACT	A	125.69	PASS	AB=0.906;AC=8;AF=0.160;AN=50;BaseQRankSum=5.890;DP=622;FS=22.816;HRun=0;HaplotypeScore=45.7455;InbreedingCoeff=0.0786;MQ=31.30;MQ0=125;MQRankSum=-1.872;QD=0.60;ReadPosRankSum=2.326;VQSLOD=-0.0945;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:17:0.90:0,1,57	0/0:8,0:7:9.03:0,9,179	./.	./.	0/1:25,0:21:0:0,0,0	0/1:23,6:24:59.57:60,0,279	0/0:12,0:8:18.06:0,18,364	0/0:29,0:4:12.04:0,12,233	0/0:21,3:16:9.03:0,9,183	0/1:34,6:29:10.15:10,0,1429	0/1:25,2:16:25.55:46,0,26	0/0:15,0:11:2.93:0,3,61	0/0:24,0:18:0.20:0,0,1	0/0:25,0:22:15.05:0,15,302	0/0:17,0:16:18.06:0,18,358	0/0:19,1:13:23.59:0,24,486	0/0:22,1:13:3.01:0,3,61	./.	0/0:22,0:13:36.12:0,36,729	1/1:17,6:14:9.02:87,9,0	0/0:22,0:14:9.03:0,9,154	0/1:27,0:17:6.74:7,0,55	0/0:29,0:17:3.01:0,3,61	0/0:18,0:12:3.01:0,3,61	0/0:16,0:12:12.04:0,12,240	0/0:21,0:20:60.21:0,60,1217	0/1:29,9:26:34.82:35,0,283	0/0:12,0:12:18.06:0,18,359
chr10	369889	.	G	GGAAA	505.66	PASS	AB=0.972;AC=14;AF=0.280;AN=50;BaseQRankSum=3.612;DP=571;FS=4.303;HRun=0;HaplotypeScore=91.8525;InbreedingCoeff=0.4063;MQ=49.96;MQ0=20;MQRankSum=-3.849;QD=2.59;ReadPosRankSum=-1.278;VQSLOD=0.9939;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:13,0:11:16.85:17,0,31	0/0:16,0:8:11.96:0,12,135	./.	./.	1/1:13,11:23:12.04:184,12,0	0/0:16,0:14:15.05:0,15,230	0/0:16,0:12:6.02:0,6,82	./.	0/1:20,0:20:0.07:0,0,0	0/0:37,0:34:53.66:0,54,774	0/0:37,0:29:31.72:0,32,407	0/1:12,3:14:61.32:61,0,82	0/0:16,0:15:27.01:0,27,390	0/0:14,0:14:21:0,21,322	0/0:16,0:16:15.51:0,16,203	1/1:7,6:13:3.01:71,3,0	0/1:26,0:22:33.38:83,0,33	0/0:19,0:19:28.70:0,29,539	0/0:22,0:17:15.05:0,15,229	0/0:24,0:18:18.02:0,18,244	0/0:21,0:20:36.10:0,36,517	0/0:10,0:10:12.04:0,12,168	0/1:12,0:15:2.60:3,0,94	0/0:35,0:30:27.04:0,27,369	0/0:28,0:23:36.12:0,36,553	0/1:25,0:22:45.88:46,0,78	1/1:26,0:24:16.64:93,17,0	1/1:13,0:11:11.93:103,12,0
chr10	369920	.	AAGAAAGAAAGAAAGAG	A	180.85	PASS	AB=1.000;AC=6;AF=0.107;AN=56;BaseQRankSum=4.045;DP=524;FS=1.080;HRun=0;HaplotypeScore=170.7445;InbreedingCoeff=0.3982;MQ=47.59;MQ0=16;MQRankSum=-0.909;QD=2.01;ReadPosRankSum=-4.195;VQSLOD=1.3548;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:11:6.02:0,6,108	0/0:17,0:9:17.91:0,18,510	0/0:3,0:2:6.02:0,6,64	0/0:5,0:1:3.01:0,3,33	0/0:25,0:23:21.54:0,22,624	0/0:17,0:16:33.10:0,33,1423	0/0:12,0:10:26.81:0,27,351	1/1:13,0:3:8.95:67,9,0	1/1:6,16:22:3.01:122,3,0	0/0:31,0:28:12.45:0,12,3480	0/0:34,0:24:47.94:0,48,1884	0/0:11,0:11:15.04:0,15,647	0/0:19,0:18:39.58:0,40,1940	0/0:14,0:14:33.10:0,33,1524	0/0:12,0:12:30.01:0,30,1059	0/0:19,0:19:24.51:0,25,756	0/0:27,0:25:15.03:0,15,781	0/0:21,0:21:54.17:0,54,2664	0/0:18,0:12:21.07:0,21,1089	0/0:22,0:20:47.80:0,48,1329	0/0:19,0:18:48.06:0,48,1927	0/0:8,0:8:18.05:0,18,612	0/0:17,0:15:9.20:0,9,523	0/0:32,0:27:36.11:0,36,1476	0/0:25,0:21:45.03:0,45,2390	0/1:28,0:26:78.79:79,0,1212	0/1:27,0:25:32.82:33,0,1259	0/0:14,0:11:12.04:0,12,241
chr10	369936	.	G	GAGAA	571.76	PASS	AB=1.000;AC=12;AF=0.214;AN=56;BaseQRankSum=4.584;DP=494;FS=16.495;HRun=0;HaplotypeScore=85.9041;InbreedingCoeff=0.5691;MQ=49.01;MQ0=9;MQRankSum=-4.249;QD=4.03;ReadPosRankSum=0.207;VQSLOD=0.5155;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:3,0:16:3.01:43,3,0	0/0:11,0:7:12.04:0,12,180	0/0:6,0:4:11.93:0,12,167	0/0:14,0:7:3.30:0,3,173	0/1:23,0:22:1.33:1,0,163	0/0:12,0:12:27.08:0,27,417	0/0:15,0:13:27.08:0,27,362	1/1:10,0:3:9.03:132,9,0	0/0:17,0:17:0.47:0,0,1	0/0:27,0:26:56.67:0,57,887	0/0:29,0:21:39.12:0,39,589	0/1:12,0:12:1.38:1,0,204	0/0:20,0:19:33.66:0,34,548	0/0:16,0:16:36.02:0,36,533	0/0:17,0:17:36:0,36,525	0/0:15,0:15:6.05:0,6,324	1/1:5,21:26:12.04:276,12,0	0/0:24,0:23:50.35:0,50,766	0/0:17,0:11:21.05:0,21,302	0/0:16,0:16:42.06:0,42,559	0/0:21,0:20:36.12:0,36,565	0/0:9,0:9:18.06:0,18,284	0/0:15,0:14:23.98:0,24,311	0/0:30,0:26:30.05:0,30,422	0/0:20,0:19:39.13:0,39,633	0/1:21,0:19:41.03:51,0,41	0/1:22,0:21:0.27:122,0,0	1/1:10,0:7:12.83:94,13,0
chr10	370080	.	AGAAG	A	1101.78	PASS	AC=10;AF=0.192;AN=52;BaseQRankSum=4.447;DP=545;FS=3.432;HRun=0;HaplotypeScore=90.4572;InbreedingCoeff=0.8568;MQ=50.02;MQ0=16;MQRankSum=0.216;QD=10.49;ReadPosRankSum=1.055;VQSLOD=2.4261;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:17,2:19:30.07:429,30,0	0/0:13,0:12:29.95:0,30,486	./.	./.	0/0:31,0:30:33.49:0,33,385	0/0:12,0:11:14.98:0,15,243	0/0:19,0:19:48.03:0,48,611	0/0:16,0:13:6.41:0,6,45	0/0:13,0:13:5.95:0,6,58	0/0:27,0:23:53.39:0,53,864	0/0:24,0:22:27.30:0,27,429	0/0:12,0:12:32.97:0,33,526	0/0:16,0:16:35.94:0,36,527	0/0:11,0:11:20.94:0,21,423	0/0:15,0:15:41.90:0,42,690	0/0:14,0:14:26.96:0,27,442	1/1:11,22:31:7.85:269,8,0	0/0:24,0:24:38.97:0,39,961	0/0:21,0:13:30.09:0,30,558	0/0:32,0:26:52.69:0,53,865	0/0:12,0:12:26.91:0,27,432	0/0:11,0:11:20.98:0,21,331	0/0:16,0:15:35.92:0,36,517	0/0:36,0:35:49.70:0,50,1020	0/0:39,0:29:47.81:0,48,685	1/1:9,13:19:18.25:410,18,0	1/1:2,14:16:6.02:97,6,0	1/1:2,13:13:3.01:49,3,0
chr10	370135	.	A	AGG	156.33	PASS	AB=0.963;AC=5;AF=0.093;AN=54;BaseQRankSum=6.947;DP=505;FS=31.230;HRun=0;HaplotypeScore=69.9731;InbreedingCoeff=0.2355;MQ=47.41;MQ0=23;MQRankSum=-6.755;QD=1.61;ReadPosRankSum=0.598;VQSLOD=0.0910;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:16:36.12:0,36,583	0/0:15,0:12:27.56:0,28,440	./.	0/0:4,0:1:1.82:0,2,5	0/0:26,0:21:36.12:0,36,587	0/0:8,0:8:18.02:0,18,265	0/0:12,0:12:36.12:0,36,557	0/0:15,0:3:6.02:0,6,95	1/1:9,0:8:2.68:11,3,0	0/1:20,1:19:24.69:25,0,658	0/0:21,0:20:20.71:0,21,386	0/0:13,0:12:33.11:0,33,538	0/0:23,0:23:48.13:0,48,783	0/0:11,0:11:24.08:0,24,392	0/0:16,0:15:45.15:0,45,734	0/0:15,0:15:42.14:0,42,665	0/0:28,0:26:43.70:0,44,688	0/0:17,0:15:42.14:0,42,684	0/0:17,0:14:36.11:0,36,562	0/0:25,0:23:48.16:0,48,778	0/0:10,0:8:24.08:0,24,392	0/0:9,0:8:18.06:0,18,293	0/0:21,0:21:33.11:0,33,528	0/0:25,2:26:11.88:0,12,743	0/1:39,3:31:99:217,0,662	0/1:25,0:21:0.60:1,0,817	0/0:21,0:20:38.62:0,39,595	0/0:21,0:16:24.08:0,24,392
chr10	370662	.	GCTCAAACT	G	393.88	PASS	AB=0.833;AC=9;AF=0.750;AN=12;BaseQRankSum=-1.589;DP=131;FS=3.680;HRun=0;HaplotypeScore=13.0652;MQ=52.17;MQ0=9;MQRankSum=-0.572;QD=10.65;ReadPosRankSum=0.000;VQSLOD=0.8242;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:5,11:3:3.01:59,3,0	./.	./.	0/1:4,1:5:35.33:155,0,35	./.	./.	./.	./.	./.	1/1:1,4:2:3.01:84,3,0	0/0:0,2:1:0:0,0,0	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	1/1:1,3:1:3.01:84,3,0	1/1:2,5:4:3.01:84,3,0	./.
chr10	370879	.	AGCTGGGGCTTGGGTCTT	A	109.68	PASS	AC=4;AF=1.00;AN=4;DP=208;FS=0.000;HRun=0;HaplotypeScore=6.8834;MQ=7.35;MQ0=174;QD=9.14;VQSLOD=0.6645;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	./.	./.	./.	./.	./.	1/1:2,2:1:3:25,3,0	./.	./.	./.	./.	./.	./.	./.	./.	./.	1/1:1,7:2:3.01:148,3,0	./.	./.	./.	./.	./.	./.	./.	./.
chr10	376751	.	G	GT	321.76	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.534;DP=558;FS=13.027;HRun=7;HaplotypeScore=72.9879;InbreedingCoeff=0.8326;MQ=48.50;MQ0=11;MQRankSum=-4.029;QD=13.99;ReadPosRankSum=-2.751;VQSLOD=1.4450;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:32.01:0,32,200	0/0:9,0:9:27.04:0,27,259	0/0:20,0:11:24.44:0,24,216	0/0:11,0:10:17.89:0,18,174	0/0:26,0:25:63.09:0,63,603	0/0:30,0:30:51.05:0,51,482	0/0:26,0:25:69.10:0,69,663	1/1:12,11:20:36.10:416,36,0	0/0:8,0:8:14.68:0,15,93	0/0:33,0:33:99:0,99,945	0/0:24,0:23:50.05:0,50,468	0/0:21,0:20:39.05:0,39,376	0/0:18,0:18:36.86:0,37,349	0/0:19,0:17:26.96:0,27,259	0/0:19,0:19:18.02:0,18,173	0/0:17,0:17:30.04:0,30,289	0/0:20,0:20:28.43:0,28,178	0/0:19,0:19:42.95:0,43,406	0/0:26,0:20:51.05:0,51,485	0/0:20,0:20:54.07:0,54,515	0/0:21,1:21:14.92:0,15,427	0/0:12,0:11:27.04:0,27,260	0/0:17,0:17:39.06:0,39,375	0/0:21,0:21:37.42:0,37,350	0/0:21,0:21:51.07:0,51,492	0/0:23,0:23:57.84:0,58,316	0/0:24,1:25:4.89:0,5,204	0/0:6,0:6:15.52:0,16,88
chr10	376796	.	GT	G	1547.83	PASS	AB=0.984;AC=16;AF=0.286;AN=56;BaseQRankSum=4.669;DP=551;FS=3.610;HRun=11;HaplotypeScore=73.2149;InbreedingCoeff=0.8061;MQ=53.96;MQ0=12;MQRankSum=-2.823;QD=8.06;ReadPosRankSum=-0.328;VQSLOD=2.4114;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,19:22:32.52:270,33,0	0/0:10,0:9:21.02:0,21,212	0/1:30,0:15:12.23:12,0,69	0/1:30,0:16:10.60:11,0,70	0/0:6,0:17:17.21:0,17,91	0/0:32,1:32:32.09:0,32,459	0/0:20,0:20:42.04:0,42,427	1/1:9,19:27:18.84:353,19,0	1/1:1,13:14:29.90:241,30,0	0/0:20,0:22:41.87:0,42,416	0/0:31,0:30:58.17:0,58,643	0/0:16,1:18:38.85:0,39,373	0/0:19,0:19:42.07:0,42,430	0/0:12,0:12:17.98:0,18,177	0/0:16,0:16:24.06:0,24,256	0/0:17,0:17:36.09:0,36,384	1/1:2,14:16:29.96:246,30,0	0/0:18,0:18:51.12:0,51,536	0/0:6,0:12:29.09:0,29,206	0/0:5,0:22:41.10:0,41,224	0/0:5,0:15:28.65:0,29,152	0/0:3,0:7:11.68:0,12,70	0/0:16,0:18:50.69:0,51,473	0/0:27,1:27:54.06:0,54,548	0/0:13,1:15:35.92:0,36,366	1/1:5,16:20:41.91:345,42,0	1/1:4,18:23:28.39:217,28,0	1/1:4,3:7:5.97:49,6,0
chr10	377069	.	AC	A	366.50	PASS	AB=0.591;AC=13;AF=0.250;AN=52;BaseQRankSum=1.827;DP=471;FS=0.866;HRun=9;HaplotypeScore=49.3335;InbreedingCoeff=0.7518;MQ=35.51;MQ0=96;MQRankSum=0.301;QD=4.36;ReadPosRankSum=-0.328;VQSLOD=-0.4506;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,8:7:5.95:47,6,0	0/0:8,0:7:14.96:0,15,143	./.	./.	0/0:26,0:20:24.07:0,24,276	0/0:22,0:19:21.06:0,21,242	0/0:23,1:17:27.08:0,27,308	1/1:17,0:3:2.98:22,3,0	1/1:1,11:10:12.01:110,12,0	0/0:19,0:16:39.08:0,39,436	0/0:19,0:18:23.86:0,24,277	0/0:17,0:11:12.03:0,12,138	0/0:22,0:18:26.82:0,27,309	0/0:17,0:13:17.86:0,18,193	0/0:18,0:13:13.15:0,13,215	0/0:12,0:11:14.91:0,15,173	1/1:1,6:6:11.03:88,11,0	0/0:15,0:13:33.10:0,33,381	0/0:14,0:7:17.72:0,18,179	0/0:30,0:24:45.05:0,45,490	0/0:22,0:9:18.05:0,18,208	0/0:14,3:12:18.05:0,18,200	0/0:14,0:13:24:0,24,248	0/0:26,0:20:33.06:0,33,365	0/0:10,0:9:11.81:0,12,123	0/1:4,9:6:22.61:70,0,23	1/1:2,12:7:18.01:165,18,0	1/1:6,1:4:3:27,3,0
chr10	377245	.	ATGT	A	89.07	PASS	AB=0.678;AC=3;AF=0.054;AN=56;BaseQRankSum=2.963;DP=769;FS=1.723;HRun=0;HaplotypeScore=60.7476;InbreedingCoeff=-0.0799;MQ=51.72;MQ0=86;MQRankSum=-2.874;QD=0.56;ReadPosRankSum=1.490;VQSLOD=1.5825;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:38:33.11:0,33,776	0/0:7,0:5:5.98:0,6,61	0/0:11,0:2:3.01:0,3,70	0/0:19,0:10:27.08:0,27,546	0/1:27,57:39:99:125,0,450	0/0:24,0:21:18.06:0,18,391	0/0:25,0:22:24:0,24,459	0/0:40,0:16:42.13:0,42,930	0/0:22,0:20:30.08:0,30,618	0/0:30,0:28:81.26:0,81,1813	0/0:19,0:13:18.06:0,18,405	0/0:23,0:17:12.04:0,12,283	0/0:24,0:20:21.03:0,21,444	0/0:16,0:13:9.03:0,9,213	0/1:27,10:32:22.50:22,0,561	0/0:20,0:14:15.03:0,15,266	0/1:18,21:37:40.68:41,0,197	0/0:8,0:7:5.87:0,6,142	0/0:56,0:14:42.11:0,42,820	0/0:38,0:35:68.86:0,69,1439	0/0:40,0:35:69.18:0,69,1523	0/0:18,0:16:12.04:0,12,284	0/0:22,0:19:24.04:0,24,566	0/0:25,0:25:21.07:0,21,496	0/0:11,0:11:12.04:0,12,251	0/0:35,1:27:81.27:0,81,1782	0/0:21,0:15:26.94:0,27,582	0/0:12,0:10:15.03:0,15,354
chr10	378706	.	TA	T	1006.73	PASS	AB=0.819;AC=14;AF=0.250;AN=56;BaseQRankSum=8.418;DP=598;FS=11.326;HRun=11;HaplotypeScore=67.5578;InbreedingCoeff=0.6508;MQ=55.25;MQ0=31;MQRankSum=-5.599;QD=6.37;ReadPosRankSum=0.449;VQSLOD=0.7398;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:12,9:15:1.70:188,0,2	0/0:14,1:15:11.46:0,11,306	0/0:28,0:10:18.14:0,18,129	0/1:16,0:4:4.12:4,0,4	0/0:41,0:39:64.73:0,65,691	0/0:23,0:18:51.09:0,51,530	0/1:13,1:14:13.40:13,0,225	1/1:16,9:17:20.48:152,20,0	0/1:7,8:13:27.07:123,0,27	0/0:28,1:23:26.81:0,27,471	0/0:30,0:28:41.85:0,42,413	0/0:17,0:14:24.04:0,24,246	0/0:21,1:18:23.76:0,24,454	0/0:27,1:24:26.36:0,26,451	0/0:24,0:19:36.05:0,36,371	0/0:16,0:16:30.08:0,30,320	1/1:8,7:13:25.96:191,26,0	0/0:13,0:12:30.06:0,30,312	0/0:19,0:16:39.04:0,39,396	0/0:33,2:36:72.84:0,73,877	0/0:11,0:10:27.06:0,27,282	0/0:19,1:20:11.50:0,12,321	0/0:22,0:20:33:0,33,336	0/0:10,0:10:23.99:0,24,234	0/0:30,0:30:54.04:0,54,540	1/1:7,13:19:14.67:295,15,0	1/1:7,7:9:3.21:93,3,0	1/1:5,9:13:14.86:123,15,0
chr10	379760	.	G	GTC	201.17	PASS	AB=0.921;AC=6;AF=0.125;AN=48;BaseQRankSum=5.176;DP=573;FS=1.137;HRun=0;HaplotypeScore=65.9784;InbreedingCoeff=-0.1806;MQ=31.75;MQ0=133;MQRankSum=-3.729;QD=1.45;ReadPosRankSum=1.740;VQSLOD=1.4562;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:13,0:8:8.98:0,9,99	./.	0/0:10,0:1:3:0,3,25	0/0:31,0:19:20.70:0,21,176	./.	0/0:31,0:16:17.88:0,18,169	0/0:12,0:3:8.97:0,9,70	./.	0/0:23,0:15:44.84:0,45,436	0/0:22,0:15:2.99:0,3,24	0/1:25,2:21:12.49:12,0,160	0/1:17,1:12:22.81:23,0,100	0/1:17,0:11:1.51:2,0,78	0/1:24,1:17:26.30:26,0,114	0/1:16,8:14:49.29:233,0,49	0/0:8,0:4:0.76:0,1,17	0/0:27,0:22:32.97:0,33,342	0/0:15,0:6:14.97:0,15,122	0/0:18,0:12:17.99:0,18,199	0/0:42,0:29:38.82:0,39,385	0/1:26,2:19:14.49:14,0,148	0/0:22,0:12:8.95:0,9,86	0/0:42,0:37:14.87:0,15,109	0/0:14,0:5:5.96:0,6,45	0/0:20,0:7:20.96:0,21,174	0/0:11,0:6:5.88:0,6,36	0/0:17,0:8:20.92:0,21,177
chr10	379766	.	G	GTC	219.61	PASS	AB=0.933;AC=8;AF=0.167;AN=48;BaseQRankSum=5.020;DP=583;FS=0.000;HRun=0;HaplotypeScore=67.2050;InbreedingCoeff=-0.1005;MQ=31.31;MQ0=133;MQRankSum=-3.853;QD=1.44;ReadPosRankSum=4.413;VQSLOD=0.7651;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:13,0:8:8.98:0,9,100	./.	0/0:11,0:1:2.99:0,3,23	0/0:30,0:18:20.72:0,21,177	./.	0/0:30,0:15:17.87:0,18,168	0/0:11,0:3:8.97:0,9,70	./.	0/0:25,0:15:44.83:0,45,437	0/0:22,0:16:3:0,3,25	0/1:28,1:22:12.58:13,0,155	0/1:17,1:12:22.90:23,0,100	0/1:17,0:11:12.15:12,0,75	0/1:25,1:17:26.32:26,0,114	0/1:18,7:15:48.21:240,0,48	1/1:8,0:3:1.25:3,1,0	0/0:29,0:24:32.97:0,33,342	0/0:14,0:7:14.79:0,15,114	0/0:22,0:15:20.95:0,21,218	0/0:41,0:28:35.87:0,36,362	0/1:28,2:19:19.87:20,0,130	0/0:20,0:10:8.94:0,9,84	0/0:41,0:36:14.87:0,15,109	0/0:14,0:5:3:0,3,25	0/0:22,0:7:20.93:0,21,168	0/0:14,0:4:5.87:0,6,35	0/0:14,0:5:11.95:0,12,108
chr10	380328	.	A	AT	568.62	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-0.481;DP=585;FS=1.831;HRun=9;HaplotypeScore=58.1246;InbreedingCoeff=0.7909;MQ=55.07;MQ0=22;MQRankSum=-0.480;QD=27.08;ReadPosRankSum=1.363;VQSLOD=4.0833;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,21:21:60.16:663,60,0	0/0:6,0:6:18:0,18,156	0/0:11,0:10:8.74:0,9,79	0/0:9,0:5:2.83:0,3,26	0/0:28,0:26:53.60:0,54,443	0/0:23,0:17:38.97:0,39,338	0/0:12,0:8:20.99:0,21,182	0/0:24,0:19:53.93:0,54,457	0/0:15,0:15:41.96:0,42,358	0/0:29,0:28:70.31:0,70,547	0/0:31,0:27:64.78:0,65,463	0/0:15,0:15:34.91:0,35,290	0/0:20,0:20:53.87:0,54,450	0/0:19,0:18:47.90:0,48,408	0/0:20,0:18:47.72:0,48,379	0/0:14,0:14:38.95:0,39,330	0/0:30,0:27:59.89:0,60,503	0/0:17,0:16:47.96:0,48,410	0/0:27,0:25:52.98:0,53,442	0/0:33,0:32:89.79:0,90,752	0/0:25,0:23:50.95:0,51,440	0/0:23,0:22:50.96:0,51,438	0/0:19,0:18:38.99:0,39,338	0/0:17,0:17:41.74:0,42,338	0/0:26,0:25:65.99:0,66,573	0/0:29,0:27:74.96:0,75,644	0/0:32,0:30:62.93:0,63,539	0/0:7,0:6:17.98:0,18,153
chr10	381944	.	C	CAG	68.90	PASS	AB=0.889;AC=5;AF=0.096;AN=52;BaseQRankSum=4.713;DP=645;FS=12.735;HRun=0;HaplotypeScore=124.7780;InbreedingCoeff=0.3008;MQ=39.66;MQ0=50;MQRankSum=1.606;QD=0.79;ReadPosRankSum=-2.364;VQSLOD=1.3031;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:26:6.38:97,0,6	0/0:17,0:12:20.98:0,21,240	./.	./.	0/0:24,0:22:8.43:0,8,132	0/0:30,0:28:30.33:0,30,343	0/0:31,0:19:32.61:0,33,367	0/0:17,0:1:0:0,0,0	0/1:12,11:23:10.76:11,0,29	0/0:32,0:21:54.01:0,54,601	0/0:14,0:10:8.99:0,9,134	0/0:29,0:23:24.17:0,24,226	0/0:24,0:18:23.11:0,23,221	0/0:27,0:22:28.75:0,29,249	0/0:33,0:22:14.77:0,15,163	0/0:30,0:23:20.66:0,21,242	0/0:11,0:6:0.36:0,0,1	0/0:25,0:23:59.98:0,60,745	0/0:17,0:8:21.05:0,21,259	0/0:37,0:29:45.02:0,45,509	0/0:50,0:43:78.10:0,78,1056	0/0:24,0:19:2.45:0,2,43	0/0:21,0:17:14.77:0,15,194	0/0:33,0:28:51.08:0,51,622	0/0:24,0:19:32.59:0,33,318	0/1:20,0:9:24.35:24,0,207	1/1:15,0:9:5.97:46,6,0	0/0:8,0:4:3.01:0,3,34
chr10	388484	.	TTGTGTG	T	99.85	PASS	AC=2;AF=0.038;AN=52;BaseQRankSum=3.582;DP=590;FS=4.661;HRun=0;HaplotypeScore=101.5072;InbreedingCoeff=0.5842;MQ=46.79;MQ0=38;MQRankSum=-1.153;QD=5.55;ReadPosRankSum=0.318;VQSLOD=1.8195;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:40:30.10:0,30,740	0/0:10,0:11:18.06:0,18,452	./.	./.	0/0:27,0:25:24.08:0,24,509	0/0:24,0:21:6.02:0,6,127	0/0:24,0:21:17.29:0,17,430	0/0:34,0:22:8.98:0,9,127	1/1:11,7:18:9.03:182,9,0	0/0:17,0:15:27.09:0,27,676	0/0:17,0:17:15.05:0,15,447	0/0:14,0:14:21.07:0,21,629	0/0:23,0:20:39.03:0,39,1070	0/0:22,0:19:14.97:0,15,377	0/0:21,0:20:18.06:0,18,558	0/0:16,0:16:30.10:0,30,905	0/0:17,0:15:9.03:0,9,180	0/0:13,0:12:15.05:0,15,357	0/0:27,0:19:12.04:0,12,384	0/0:21,0:18:12.04:0,12,367	0/0:31,0:29:20.85:0,21,593	0/0:16,0:14:14.20:0,14,406	0/0:20,0:18:18.06:0,18,394	0/0:31,0:28:31.74:0,32,919	0/0:18,0:16:27.08:0,27,716	0/0:16,0:17:23.78:0,24,481	0/0:27,0:25:11.07:0,11,232	0/0:15,0:10:6.02:0,6,159
chr10	388529	.	T	TGTGT	61.84	PASS	AB=0.893;AC=5;AF=0.096;AN=52;BaseQRankSum=1.648;DP=563;FS=1.775;HRun=0;HaplotypeScore=78.8298;InbreedingCoeff=0.3068;MQ=44.91;MQ0=32;MQRankSum=-3.333;QD=0.85;ReadPosRankSum=1.302;VQSLOD=1.2709;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:43:16.67:0,17,168	0/0:9,0:8:11.99:0,12,140	0/0:34,0:3:0:0,0,0	./.	0/0:18,0:13:9.02:0,9,120	0/0:11,0:9:2.37:0,2,8	0/0:21,0:15:9:0,9,118	./.	0/0:20,0:16:9.01:0,9,84	0/0:24,0:18:14.95:0,15,150	0/0:16,0:13:11.99:0,12,173	0/0:17,0:14:12.04:0,12,185	0/0:22,0:16:24.03:0,24,366	0/0:22,0:18:9.01:0,9,131	0/0:21,0:19:18.02:0,18,252	0/0:20,0:18:26.88:0,27,348	0/0:15,0:13:3.01:0,3,46	0/0:11,0:10:11.96:0,12,167	0/0:10,0:7:12.04:0,12,166	0/1:18,0:13:19.42:19,0,117	0/0:28,0:26:14.56:0,15,152	0/0:15,0:12:12.50:0,12,146	0/0:16,0:12:14.83:0,15,163	0/0:33,0:28:24.08:0,24,340	0/0:13,0:11:14.60:0,15,170	0/1:19,0:17:17.75:108,0,18	0/1:10,4:17:0.01:1,0,0	1/1:17,0:12:5.74:36,6,0
chr10	394415	.	GAC	G	1754.51	PASS	AB=0.786;AC=5;AF=0.089;AN=56;BaseQRankSum=9.618;DP=1342;DS;FS=6.385;HRun=0;HaplotypeScore=221.6240;InbreedingCoeff=0.6557;MQ=52.02;MQ0=63;MQRankSum=-6.156;QD=11.70;ReadPosRankSum=-1.557;VQSLOD=2.3293;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:242,5:243:99:0,184,5983	0/0:7,0:7:21.07:0,21,336	0/0:41,0:6:7.74:0,8,60	0/0:55,0:10:3.60:0,4,68	0/0:30,0:30:81.21:0,81,1203	0/0:17,0:17:8.83:0,9,408	0/0:36,0:35:81.22:0,81,1252	1/1:39,32:56:91.82:973,92,0	1/1:13,55:63:72.05:896,72,0	0/0:29,0:25:69.24:0,69,1123	0/0:21,1:21:12.68:0,13,709	0/0:31,0:31:60.18:0,60,931	0/0:23,1:23:7.59:0,8,549	0/0:31,0:31:77.83:0,78,1219	0/0:35,0:35:68.74:0,69,1133	0/0:28,0:28:61.07:0,61,1014	0/0:180,0:178:99:0,321,5582	0/0:17,0:17:41.95:0,42,622	0/0:12,0:4:12.04:0,12,196	0/0:22,0:21:30.20:0,30,700	0/0:74,1:73:99:0,165,2478	0/0:25,0:25:45.15:0,45,737	0/0:20,0:20:50.47:0,50,817	0/0:43,0:43:93.30:0,93,1483	0/1:8,3:11:13.35:13,0,321	0/0:67,2:64:55.89:0,56,2366	0/0:59,0:58:99:0,132,1949	0/0:33,0:35:81.17:0,81,1263
chr10	400085	.	G	GCA	562.38	PASS	AC=6;AF=0.111;AN=54;BaseQRankSum=-1.797;DP=722;FS=0.000;HRun=0;HaplotypeScore=110.5489;InbreedingCoeff=0.8205;MQ=47.49;MQ0=87;MQRankSum=-0.470;QD=6.32;ReadPosRankSum=1.327;VQSLOD=3.2936;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:29,16:37:26.19:399,26,0	0/0:12,0:12:30.05:0,30,330	0/0:28,0:6:11.40:0,11,112	0/0:28,0:4:6.01:0,6,67	0/0:23,0:21:39.04:0,39,431	0/0:18,0:16:30.08:0,30,347	0/0:15,0:17:21.91:0,22,236	./.	1/1:20,0:14:2.52:10,3,0	0/0:32,0:30:57.17:0,57,670	0/0:30,0:29:39.51:0,40,425	0/0:20,0:20:45.09:0,45,519	0/0:16,0:16:30.08:0,30,346	0/0:23,0:22:44.91:0,45,484	0/0:18,0:19:36.11:0,36,429	0/0:14,0:13:17.89:0,18,193	1/1:11,13:23:6.77:272,7,0	0/0:11,0:11:23.86:0,24,254	0/0:32,0:23:51.14:0,51,594	0/0:19,0:18:33.03:0,33,362	0/0:75,0:70:99:0,111,1288	0/0:25,0:26:50.80:0,51,529	0/0:31,0:31:27.22:0,27,358	0/0:27,0:26:36.56:0,37,418	0/0:23,0:23:52.37:0,52,577	0/0:44,0:37:61.03:0,61,834	0/0:19,0:15:32.93:0,33,363	0/0:5,0:4:9.01:0,9,95
chr10	400257	.	A	AT	1134.17	PASS	AB=0.809;AC=5;AF=0.089;AN=56;BaseQRankSum=5.139;DP=582;FS=1.242;HRun=0;HaplotypeScore=60.4489;InbreedingCoeff=0.2515;MQ=48.62;MQ0=78;MQRankSum=1.185;QD=11.46;ReadPosRankSum=2.131;VQSLOD=3.6827;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:45:57.20:0,57,464	0/0:3,0:3:9:0,9,104	0/0:10,0:2:5.85:0,6,44	0/1:9,0:3:1.98:2,0,30	0/0:34,0:33:54.30:0,54,496	0/0:25,0:19:1.53:0,2,269	0/0:10,0:8:15.93:0,16,186	0/0:40,0:23:53.29:0,53,562	0/0:10,0:5:5.99:0,6,61	0/0:36,0:33:88.46:0,88,1009	0/0:17,0:15:23.55:0,24,240	0/0:11,0:10:26.85:0,27,273	0/0:7,0:6:12:0,12,140	0/0:16,0:13:32.97:0,33,357	0/0:7,0:6:12:0,12,128	0/0:9,0:8:18:0,18,194	0/0:58,0:50:63.97:0,64,398	0/0:13,0:13:36.06:0,36,417	0/0:25,0:18:45.01:0,45,475	0/0:26,0:23:58.22:0,58,615	0/0:4,0:4:11.97:0,12,124	0/0:26,0:23:49.34:0,49,500	0/0:18,0:15:23.87:0,24,247	0/0:11,0:11:20.96:0,21,211	0/0:16,0:16:41.92:0,42,450	1/1:16,27:31:9.88:760,10,0	0/1:10,11:14:14.98:275,0,15	0/1:18,5:20:99:206,0,157
chr10	411841	.	G	GA	2498.89	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-8.890;DP=519;FS=4.975;HRun=8;HaplotypeScore=45.7762;InbreedingCoeff=0.9898;MQ=75.04;MQ0=0;MQRankSum=-1.020;QD=26.87;ReadPosRankSum=1.131;VQSLOD=4.3043;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,13:14:33.10:381,33,0	0/0:4,0:4:12.01:0,12,110	0/0:11,0:12:27.56:0,28,209	0/0:9,0:9:27.01:0,27,247	0/0:22,0:22:66.04:0,66,604	0/0:24,0:24:66.01:0,66,595	0/0:11,0:11:26.97:0,27,237	0/0:24,0:24:57.03:0,57,522	0/0:25,0:25:66.03:0,66,604	0/0:24,0:24:69.04:0,69,631	0/0:29,0:29:84.03:0,84,764	0/0:13,0:13:27:0,27,247	0/0:21,0:21:63.03:0,63,576	0/0:13,0:13:36.02:0,36,329	0/0:19,0:19:57.03:0,57,522	0/0:21,0:21:63.03:0,63,577	1/1:5,16:21:45.05:501,45,0	0/0:7,0:7:18:0,18,165	0/0:26,0:25:75.04:0,75,686	0/0:37,0:37:99:0,99,902	0/0:18,0:18:42:0,42,379	0/0:17,0:17:48.02:0,48,439	0/0:23,0:23:63.03:0,63,576	0/0:12,0:12:33.02:0,33,302	0/0:15,0:15:36.01:0,36,329	1/1:2,16:18:48.14:554,48,0	1/1:2,21:23:60.18:692,60,0	1/1:1,15:16:48.14:547,48,0
chr10	421280	.	AT	A	1276.83	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.537;DP=448;FS=3.549;HRun=7;HaplotypeScore=45.5905;InbreedingCoeff=0.8797;MQ=67.01;MQ0=1;MQRankSum=1.145;QD=25.54;ReadPosRankSum=-3.270;VQSLOD=2.7139;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:66.21:0,66,828	0/0:12,0:12:33.10:0,33,413	0/0:11,0:8:20.73:0,21,209	0/0:14,0:11:13.80:0,14,159	0/0:23,0:23:69.22:0,69,868	0/0:17,0:17:48.15:0,48,604	0/0:10,0:10:30.06:0,30,361	1/1:2,34:36:99:1031,102,0	1/1:0,14:14:36.08:367,36,0	0/0:27,0:27:69.22:0,69,868	0/0:25,0:25:72.21:0,72,881	0/0:3,0:3:9.03:0,9,113	0/0:10,0:10:30.10:0,30,377	0/0:3,0:3:9.03:0,9,113	0/0:9,0:9:27.09:0,27,339	0/0:14,1:15:8.50:0,8,409	0/0:13,0:13:36.12:0,36,453	0/0:10,0:10:30.10:0,30,377	0/0:17,0:17:42.12:0,42,514	0/0:23,0:23:66.21:0,66,829	0/0:5,0:5:12.04:0,12,151	0/0:8,0:8:21.07:0,21,264	0/0:22,0:22:54.17:0,54,679	0/0:5,0:5:15.05:0,15,189	0/0:20,0:20:54.15:0,54,663	0/0:23,0:23:60.19:0,60,755	0/0:28,0:28:81.25:0,81,1003	0/0:20,0:20:45.11:0,45,549
chr10	426387	.	AG	A	1127.21	PASS	AB=1.000;AC=12;AF=0.214;AN=56;BaseQRankSum=9.408;DP=412;FS=0.504;HRun=1;HaplotypeScore=58.4488;InbreedingCoeff=0.7857;MQ=61.17;MQ0=13;MQRankSum=-3.175;QD=9.63;ReadPosRankSum=-1.139;VQSLOD=0.7575;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:18,10:30:67.77:448,68,0	0/0:6,0:6:11.96:0,12,129	0/1:18,0:8:2.03:2,0,67	0/0:13,0:9:22.69:0,23,160	0/0:20,0:19:41.79:0,42,426	0/0:18,0:18:34.67:0,35,427	0/0:15,0:14:34.52:0,35,344	0/0:19,0:18:8.07:0,8,236	0/1:8,0:7:10.66:11,0,53	0/0:19,0:19:44.14:0,44,458	0/0:13,1:14:9.36:0,9,271	0/0:12,0:12:29.94:0,30,292	0/0:13,0:13:29.85:0,30,325	0/0:10,0:10:23.88:0,24,228	0/0:9,1:10:11.29:0,11,127	0/0:11,0:11:24.80:0,25,224	1/1:2,0:14:20.61:127,21,0	0/0:10,0:7:17.93:0,18,165	0/0:21,0:20:52.91:0,53,499	0/0:17,1:18:23.01:0,23,334	0/0:10,0:8:13.78:0,14,122	0/0:6,0:6:16.58:0,17,174	0/0:21,0:20:42.14:0,42,437	0/0:15,0:15:27.12:0,27,284	0/0:14,0:13:22.26:0,22,164	1/1:10,6:14:31.40:249,31,0	1/1:12,5:17:39.91:278,40,0	1/1:2,6:12:27.99:189,28,0
chr10	426389	.	AG	A	896.48	PASS	AB=0.881;AC=10;AF=0.179;AN=56;BaseQRankSum=9.350;DP=399;FS=0.000;HRun=1;HaplotypeScore=57.3005;InbreedingCoeff=0.7854;MQ=62.30;MQ0=11;MQRankSum=-2.396;QD=8.30;ReadPosRankSum=1.052;VQSLOD=0.7150;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:21,10:30:53.68:399,54,0	0/0:5,0:5:12.04:0,12,181	0/1:18,0:8:3.56:4,0,185	0/0:14,0:9:22.44:0,22,263	0/0:17,0:16:42.14:0,42,670	0/0:17,0:17:45.15:0,45,697	0/0:14,0:13:36.12:0,36,559	0/0:18,0:17:35.77:0,36,537	0/0:9,0:8:14.88:0,15,204	0/0:19,0:19:51.17:0,51,779	0/0:14,0:14:29.91:0,30,445	0/0:12,0:12:30.10:0,30,478	0/0:13,0:13:33.06:0,33,494	0/0:12,0:12:30.07:0,30,432	0/0:8,0:8:18.06:0,18,269	0/0:10,0:10:21.07:0,21,331	1/1:13,0:13:19.64:106,20,0	0/0:9,0:7:18.06:0,18,273	0/0:22,0:21:60.17:0,60,889	0/0:16,0:16:42.09:0,42,663	0/0:8,0:7:15.05:0,15,238	0/0:6,0:6:18.06:0,18,286	0/0:21,0:20:48.14:0,48,723	0/0:14,0:14:29.89:0,30,475	0/0:13,0:12:24.08:0,24,363	0/1:11,5:14:4.41:164,0,4	1/1:14,3:17:8.17:214,8,0	1/1:7,6:12:25.97:170,26,0
chr10	427607	.	A	ATGTGTGTGCC	14814.21	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-7.427;DP=727;FS=23.949;HRun=0;HaplotypeScore=195.7364;InbreedingCoeff=0.9995;MQ=65.95;MQ0=0;MQRankSum=-13.492;QD=68.90;ReadPosRankSum=-2.831;VQSLOD=2.8574;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,16:38:44.94:1480,45,0	0/0:20,0:20:57.20:0,57,1754	0/0:35,0:34:73.13:0,73,1929	0/0:21,0:19:39.13:0,39,999	0/0:30,0:30:78.24:0,78,2203	0/0:28,0:28:47.95:0,48,1977	0/0:16,0:16:48.15:0,48,1285	1/1:19,21:39:87.30:2874,87,0	1/1:7,19:28:45.11:1849,45,0	0/0:41,0:41:99:0,105,3025	0/0:23,0:23:57.18:0,57,1661	0/0:16,0:16:45.15:0,45,1328	0/0:22,0:22:63.22:0,63,1939	0/0:13,0:13:36.12:0,36,982	0/0:32,0:32:84.26:0,84,2375	0/0:27,0:27:78.27:0,78,2258	1/1:14,8:22:27.09:1162,27,0	0/0:13,0:13:30.10:0,30,753	0/0:18,0:18:39.12:0,39,1023	0/0:49,0:49:99:0,138,4135	0/0:24,0:24:69.24:0,69,1987	0/0:14,0:14:39.13:0,39,1209	0/0:26,0:26:60.21:0,60,1691	0/0:15,0:15:42.14:0,42,1179	0/0:29,0:29:84.29:0,84,2397	1/1:7,25:35:90.28:3755,90,0	1/1:6,21:29:54.18:2512,54,0	1/1:2,14:17:27.05:1182,27,0
chr10	429181	.	CGT	C	511.39	PASS	AB=0.918;AC=19;AF=0.365;AN=52;BaseQRankSum=4.030;DP=576;FS=6.397;HRun=0;HaplotypeScore=79.0653;InbreedingCoeff=-0.0612;MQ=60.93;MQ0=14;MQRankSum=0.386;QD=1.69;ReadPosRankSum=0.690;VQSLOD=0.9237;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:31,0:32:23.81:37,0,24	1/1:3,2:4:3.01:32,3,0	./.	./.	0/1:18,0:18:16.08:16,0,161	0/0:16,0:16:8.26:0,8,199	0/1:20,0:19:16.26:16,0,99	0/0:32,0:30:5.72:0,6,29	1/1:14,0:16:2.82:14,3,0	0/0:20,0:19:17.08:0,17,202	0/1:20,1:21:11.35:11,0,161	0/0:13,0:12:10.18:0,10,150	0/0:17,0:17:15.03:0,15,199	0/0:18,0:18:12.04:0,12,175	0/1:19,1:20:11.27:11,0,226	0/1:17,2:20:16.42:16,0,263	0/1:16,0:25:29.34:39,0,29	0/0:15,0:14:9.03:0,9,125	0/1:18,1:19:20.27:20,0,90	0/1:24,1:25:20.25:20,0,99	0/0:35,0:32:5.67:0,6,36	0/1:19,1:19:42.15:42,0,81	0/0:18,0:18:7.27:0,7,87	0/0:23,0:25:27.06:0,27,360	0/0:18,0:18:17.85:0,18,177	1/1:19,1:20:4.27:46,4,0	1/1:20,2:22:23.50:201,23,0	0/1:12,4:15:23.03:147,0,23
chr10	430917	.	AT	A	703.17	PASS	AB=0.875;AC=5;AF=0.089;AN=56;BaseQRankSum=6.795;DP=544;FS=1.430;HRun=10;HaplotypeScore=54.4750;InbreedingCoeff=0.7805;MQ=65.52;MQ0=0;MQRankSum=-0.676;QD=15.63;ReadPosRankSum=-2.600;VQSLOD=3.2021;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,1:34:87.19:0,87,949	0/0:5,0:5:15.04:0,15,166	0/0:13,0:13:20.53:0,21,174	0/1:6,1:6:8.01:8,0,148	0/0:29,0:29:75.19:0,75,822	0/0:24,1:25:57.15:0,57,623	0/0:19,0:19:54.10:0,54,577	1/1:3,22:25:62.92:535,63,0	1/1:2,11:13:32.99:287,33,0	0/0:28,0:29:78.03:0,78,832	0/0:29,0:29:69.15:0,69,751	0/0:18,0:18:48.13:0,48,531	0/0:16,0:16:42.09:0,42,449	0/0:13,0:13:36.10:0,36,397	0/0:13,0:14:29.91:0,30,313	0/0:19,0:19:54.11:0,54,584	0/0:30,0:31:78.04:0,78,844	0/0:11,0:11:33.09:0,33,364	0/0:25,0:24:54.15:0,54,597	0/0:25,0:25:63.12:0,63,678	0/0:18,0:19:54.15:0,54,597	0/0:13,1:14:10.04:0,10,339	0/0:20,0:20:57.15:0,57,629	0/0:17,0:17:51.13:0,51,556	0/0:9,0:9:24.02:0,24,252	0/0:18,0:19:50.96:0,51,536	0/0:29,0:29:75.66:0,76,823	0/0:17,0:17:45.12:0,45,498
chr10	438905	.	AT	A	961.13	PASS	AB=0.710;AC=4;AF=0.083;AN=48;BaseQRankSum=5.998;DP=560;FS=4.764;HRun=4;HaplotypeScore=25.1058;InbreedingCoeff=0.2897;MQ=41.02;MQ0=78;MQRankSum=-1.002;QD=16.02;ReadPosRankSum=2.104;VQSLOD=2.3755;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:19:6.02:0,6,84	0/0:8,0:8:21.07:0,21,294	0/0:7,0:2:6.02:0,6,83	0/1:6,1:2:23.71:24,0,25	0/0:21,0:20:27.09:0,27,377	0/0:17,0:14:12.04:0,12,167	0/0:20,0:11:6.02:0,6,84	0/0:27,0:21:63.19:0,63,862	0/0:27,0:21:9.03:0,9,126	0/0:24,0:16:45.15:0,45,629	0/0:15,0:13:24.08:0,24,336	0/0:30,0:26:21.06:0,21,277	0/0:24,0:19:9.03:0,9,126	0/0:27,0:24:23.85:0,24,336	0/0:31,0:24:9.03:0,9,126	0/0:29,0:22:30.10:0,30,420	./.	./.	0/0:19,0:10:24.05:0,24,316	0/0:9,0:9:24.08:0,24,335	0/0:20,0:16:3.01:0,3,42	0/0:14,0:13:15.05:0,15,210	0/0:13,0:12:14.83:0,15,193	./.	0/0:21,0:21:33.11:0,33,462	0/1:4,20:23:59.82:617,0,60	1/1:0,29:27:35.98:432,36,0	./.
chr10	454888	.	TC	T	1463.43	PASS	AB=0.674;AC=2;AF=0.036;AN=56;BaseQRankSum=2.513;DP=1336;FS=1.211;HRun=1;HaplotypeScore=148.6985;InbreedingCoeff=-0.0370;MQ=66.15;MQ0=11;MQRankSum=0.745;QD=14.93;ReadPosRankSum=-2.173;VQSLOD=2.8001;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:91,0:83:99:0,235,3634	0/0:18,0:18:51.16:0,51,791	0/0:33,0:29:80.36:0,80,1269	0/0:38,0:35:99:0,105,1599	0/0:48,0:45:99:0,117,1857	0/0:40,0:37:99:0,111,1763	0/0:37,0:30:84.29:0,84,1337	0/1:15,28:40:99:966,0,431	0/1:36,19:44:99:587,0,1023	0/0:57,0:56:99:0,169,2685	0/0:47,0:46:99:0,132,2078	0/0:49,0:42:99:0,123,1903	0/0:39,0:35:99:0,105,1629	0/0:38,0:35:99:0,102,1609	0/0:54,0:49:99:0,141,2239	0/0:63,0:60:99:0,175,2733	0/0:64,0:58:99:0,175,2705	0/0:25,0:24:72.23:0,72,1119	0/0:50,0:46:99:0,138,2184	0/0:57,0:53:99:0,154,2420	0/0:64,0:62:99:0,172,2720	0/0:51,0:48:99:0,129,2021	0/0:41,0:40:99:0,114,1787	0/0:56,0:53:99:0,141,2160	0/0:32,0:30:87.30:0,87,1379	0/0:60,0:58:99:0,178,2775	0/0:56,0:53:99:0,154,2431	0/0:29,0:29:81.21:0,81,1240
chr10	459888	.	CT	C	173.21	PASS	AB=0.799;AC=6;AF=0.107;AN=56;BaseQRankSum=0.361;DP=552;FS=0.599;HRun=16;HaplotypeScore=90.5394;InbreedingCoeff=0.2012;MQ=72.32;MQ0=7;MQRankSum=1.004;QD=1.92;ReadPosRankSum=2.061;VQSLOD=-0.5554;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:30:36.84:0,37,286	0/0:7,0:8:5.99:0,6,50	0/0:18,0:12:7.30:0,7,35	0/0:17,0:14:8.45:0,8,52	0/0:20,1:21:3.73:0,4,116	0/0:22,2:27:9.46:0,9,277	0/0:11,0:11:9.90:0,10,140	0/0:23,0:32:37.47:0,37,200	0/0:9,0:11:12.35:0,12,64	0/0:18,1:20:26.22:0,26,183	0/0:18,0:19:32.71:0,33,248	0/0:20,0:21:29.59:0,30,219	0/0:17,1:19:2.41:0,2,137	0/0:17,1:18:13.63:0,14,192	0/0:15,0:15:8.62:0,9,134	0/0:22,0:23:13.89:0,14,206	0/1:20,2:22:27.19:27,0,164	0/0:20,1:21:22.96:0,23,260	0/0:27,2:31:6.21:0,6,228	0/0:15,1:21:25.91:0,26,278	0/0:13,0:13:21.45:0,21,177	0/1:16,3:19:42.44:42,0,131	0/0:20,1:21:33.18:0,33,250	0/0:22,0:21:16.98:0,17,220	0/0:13,3:17:12.88:0,13,177	1/1:17,1:17:8.52:51,9,0	0/1:17,5:22:46.39:88,0,46	0/1:3,6:9:1.36:87,0,1
chr10	460596	.	T	TAA	5137.35	PASS	AB=0.600;AC=13;AF=0.232;AN=56;BaseQRankSum=14.373;DP=487;FS=22.524;HRun=5;HaplotypeScore=88.5285;InbreedingCoeff=0.8984;MQ=77.75;MQ0=0;MQRankSum=-9.351;QD=36.70;ReadPosRankSum=0.977;VQSLOD=3.3971;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,13:17:34.65:696,35,0	0/0:9,0:9:27.09:0,27,434	0/0:13,0:13:32.71:0,33,357	0/0:12,0:12:21.17:0,21,405	0/0:20,0:20:60.18:0,60,928	0/0:14,0:14:42.14:0,42,680	0/0:15,0:15:42.14:0,42,685	1/1:9,18:27:36.89:880,37,0	1/1:3,15:20:36.05:782,36,0	0/0:20,0:20:57.19:0,57,928	0/0:25,0:25:72.23:0,72,1150	0/0:15,0:15:45.15:0,45,731	0/0:16,0:16:48.16:0,48,761	0/0:17,0:17:51.17:0,51,817	0/0:21,0:21:60.20:0,60,978	0/0:20,0:20:60.20:0,60,976	1/1:2,9:12:33.11:487,33,0	0/0:15,0:15:45.10:0,45,699	0/0:12,0:12:33.11:0,33,538	0/0:23,0:23:69.20:0,69,1057	0/0:11,0:11:33.11:0,33,538	0/0:15,0:15:45.15:0,45,734	0/0:20,0:20:57.19:0,57,926	0/0:11,0:11:27.09:0,27,431	0/0:23,0:23:69.24:0,69,1124	0/1:8,16:23:59.79:750,0,60	1/1:6,22:29:56.05:1031,56,0	1/1:0,11:11:33.11:512,33,0
chr10	460598	.	T	TC	2751.80	PASS	AB=0.579;AC=13;AF=0.232;AN=56;BaseQRankSum=16.098;DP=488;FS=21.317;HRun=0;HaplotypeScore=83.5645;InbreedingCoeff=0.8919;MQ=80.12;MQ0=0;MQRankSum=-11.640;QD=20.09;ReadPosRankSum=1.012;VQSLOD=3.2387;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,13:17:43.31:380,43,0	0/0:8,0:8:24.08:0,24,335	0/0:13,0:13:10.84:0,11,278	0/0:15,0:15:32.06:0,32,399	0/0:17,0:17:51.17:0,51,713	0/0:15,0:15:45.13:0,45,593	0/0:15,0:15:45.14:0,45,613	1/1:7,18:25:56.35:463,56,0	1/1:5,16:21:56.48:500,56,0	0/0:21,0:21:60.13:0,60,815	0/0:27,0:27:75.23:0,75,1019	0/0:15,0:15:45.14:0,45,614	0/0:16,0:16:48.15:0,48,656	0/0:16,0:16:48.14:0,48,653	0/0:21,0:21:63.19:0,63,849	0/0:20,0:20:60.20:0,60,839	1/1:3,9:12:30.70:240,31,0	0/0:15,0:15:45.15:0,45,622	0/0:11,0:11:33.10:0,33,443	0/0:23,0:23:69.20:0,69,913	0/0:11,0:11:33.11:0,33,461	0/0:16,0:16:45.15:0,45,626	0/0:21,0:21:60.19:0,60,810	0/0:12,0:12:33.07:0,33,411	0/0:23,0:23:69.23:0,69,965	0/1:6,16:21:36.57:396,0,37	1/1:6,23:29:73.70:649,74,0	1/1:0,11:11:33.04:315,33,0
chr10	465604	.	A	AC	1045.24	PASS	AC=10;AF=0.200;AN=50;BaseQRankSum=7.636;DP=563;FS=17.480;HRun=1;HaplotypeScore=26.8644;InbreedingCoeff=0.7236;MQ=24.37;MQ0=294;MQRankSum=1.816;QD=12.90;ReadPosRankSum=-0.092;VQSLOD=0.4619;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,27:21:39.09:532,39,0	0/0:8,0:1:3.01:0,3,39	./.	./.	0/0:29,0:4:6.02:0,6,78	0/0:26,0:13:15.04:0,15,179	./.	0/0:30,0:17:51.10:0,51,627	0/0:17,0:10:15.05:0,15,194	0/0:26,0:11:30.10:0,30,389	0/0:26,0:6:6.02:0,6,77	0/0:12,0:4:6.02:0,6,77	0/0:24,0:12:27.09:0,27,348	0/0:30,0:14:24.08:0,24,310	0/0:14,0:7:18.06:0,18,233	0/0:25,0:10:12.04:0,12,155	1/1:0,16:12:18.03:238,18,0	0/0:24,0:16:33.11:0,33,427	0/0:23,0:7:20.90:0,21,246	0/0:19,0:6:18.02:0,18,211	0/0:22,0:18:42.08:0,42,509	0/0:14,0:4:6.02:0,6,77	0/0:14,0:1:3.01:0,3,39	0/0:5,0:2:3.01:0,3,39	0/0:31,0:12:27.05:0,27,330	1/1:1,12:6:18.06:257,18,0	1/1:1,11:8:8.91:128,9,0	1/1:1,4:1:3.01:43,3,0
chr10	468030	.	CGT	C	61.86	PASS	AB=0.885;AC=10;AF=0.217;AN=46;BaseQRankSum=2.628;DP=456;FS=1.598;HRun=0;HaplotypeScore=71.3502;InbreedingCoeff=-0.0672;MQ=47.13;MQ0=26;MQRankSum=1.860;QD=0.30;ReadPosRankSum=1.004;VQSLOD=1.6237;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:28:0:0,0,0	0/0:7,0:6:9.03:0,9,134	0/0:31,0:5:0.47:0,0,1	0/0:16,0:1:0:0,0,0	0/0:8,0:8:11.59:0,12,119	./.	0/1:23,2:23:41.57:42,0,210	1/1:19,0:17:2.25:18,2,0	./.	0/0:10,0:9:12.04:0,12,161	./.	0/1:10,2:13:23.72:24,0,40	0/0:12,1:11:6.01:0,6,70	0/0:15,0:13:11.61:0,12,158	0/0:10,1:11:3.01:0,3,45	0/0:16,0:16:12.04:0,12,177	0/0:24,0:28:6:0,6,52	0/1:20,2:23:14.68:15,0,187	0/0:21,0:12:3.01:0,3,45	0/0:11,0:9:5.96:0,6,45	0/1:43,4:42:53.18:53,0,353	0/0:10,0:8:3:0,3,25	0/0:6,1:5:6:0,6,70	0/1:20,2:22:11.90:12,0,202	0/1:16,0:15:5.66:6,0,76	0/1:7,0:9:8.07:8,0,39	./.	./.
chr10	469282	.	CCT	C	333.32	PASS	AB=0.821;AC=23;AF=0.523;AN=44;BaseQRankSum=2.073;DP=209;FS=6.148;HRun=0;HaplotypeScore=82.4666;InbreedingCoeff=-0.0479;MQ=25.48;MQ0=5;MQRankSum=0.298;QD=2.24;ReadPosRankSum=-1.346;VQSLOD=0.9396;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:4:2.87:0,3,15	0/0:2,0:2:3.35:0,3,17	1/1:3,0:1:0.47:1,0,0	./.	0/0:9,0:8:2.29:0,2,16	1/1:5,1:4:0.58:4,1,0	1/1:4,2:5:2.97:20,3,0	0/0:6,0:5:2.60:0,3,11	1/1:15,4:16:1.60:104,2,0	0/1:4,1:6:0.55:70,0,1	./.	0/1:12,1:13:8.98:9,0,44	0/1:15,2:13:5.81:61,0,6	1/1:2,2:3:2.97:20,3,0	0/1:11,4:14:9.98:10,0,43	0/1:10,2:10:14.91:39,0,15	./.	0/1:6,1:6:3.76:18,0,4	0/0:3,0:3:4.92:0,5,21	1/1:6,1:5:1.42:21,1,0	0/1:10,2:10:16.49:20,0,16	0/0:13,1:8:9.70:0,10,51	./.	0/1:8,5:12:3.28:10,0,3	./.	./.	0/1:4,1:3:9.35:35,0,9	1/1:1,0:1:2.74:12,3,0
chr10	469285	.	AAACG	A	126.37	PASS	AB=0.935;AC=11;AF=0.220;AN=50;BaseQRankSum=3.119;DP=269;FS=2.280;HRun=0;HaplotypeScore=97.2925;InbreedingCoeff=-0.0340;MQ=31.90;MQ0=7;MQRankSum=-1.498;QD=1.20;ReadPosRankSum=2.695;VQSLOD=1.8631;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:6:11.97:0,12,164	0/0:3,0:2:6.02:0,6,103	0/0:9,0:2:2.66:0,3,61	./.	0/0:13,0:8:11.16:0,11,132	0/0:6,0:4:10.58:0,11,133	0/1:6,1:6:53.11:53,0,90	0/0:8,0:7:9.03:0,9,160	0/1:21,0:18:10.16:10,0,175	0/1:9,1:10:16.90:17,0,137	0/0:7,0:2:6.02:0,6,98	0/0:17,0:15:15.04:0,15,443	0/1:16,3:14:59.19:59,0,194	1/1:3,2:4:3.01:62,3,0	0/1:15,2:15:14.47:14,0,391	0/0:16,0:14:4.37:0,4,317	./.	0/1:9,0:8:0.33:0,0,160	0/0:6,0:6:15.05:0,15,275	0/0:7,1:6:3.19:0,3,109	0/0:19,0:16:17.12:0,17,272	0/0:17,0:9:11.91:0,12,233	0/0:7,0:4:2.80:0,3,60	0/1:15,0:13:11.99:12,0,89	0/0:4,0:3:3.01:0,3,43	./.	0/0:8,0:6:11.29:0,11,109	1/1:1,0:1:3:25,3,0
chr10	469287	.	ACG	A	67.95	PASS	AB=0.965;AC=12;AF=0.240;AN=50;BaseQRankSum=1.995;DP=287;FS=4.687;HRun=0;HaplotypeScore=97.7487;InbreedingCoeff=-0.0931;MQ=32.04;MQ0=8;MQRankSum=0.124;QD=0.54;ReadPosRankSum=-0.331;VQSLOD=1.6113;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:6:11.55:0,12,82	0/0:3,0:2:6.02:0,6,65	0/0:10,0:2:2.21:0,2,34	./.	0/1:12,2:9:7.79:8,0,52	0/0:6,0:4:8.57:0,9,80	0/1:10,0:9:13.02:13,0,34	0/0:10,0:7:9.02:0,9,89	0/1:22,0:19:8.45:8,0,68	0/1:11,0:11:22.31:22,0,54	0/0:8,0:3:5.96:0,6,46	0/0:17,0:15:12.59:0,13,251	0/1:19,1:15:50.91:51,0,112	1/1:5,0:4:2.97:20,3,0	0/1:19,0:15:20.95:21,0,193	0/0:16,0:14:13.38:0,13,175	./.	0/0:9,0:8:12.73:0,13,82	0/0:6,0:6:15.03:0,15,175	0/1:7,1:6:33.61:34,0,56	0/0:19,0:16:3.88:0,4,117	0/0:19,0:11:11.75:0,12,132	0/0:7,0:4:3:0,3,26	0/1:15,0:13:5.36:5,0,39	0/0:6,0:4:2.95:0,3,22	./.	0/0:8,0:6:3.81:0,4,34	1/1:1,0:1:2.90:16,3,0
chr10	471608	.	T	TTG	1474.73	PASS	AB=0.860;AC=10;AF=0.179;AN=56;BaseQRankSum=6.029;DP=624;FS=19.293;HRun=0;HaplotypeScore=77.6993;InbreedingCoeff=0.7567;MQ=52.03;MQ0=24;MQRankSum=-2.102;QD=9.28;ReadPosRankSum=0.392;VQSLOD=1.4162;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:16,8:17:35.70:384,36,0	0/0:14,0:14:38.99:0,39,496	0/0:71,0:9:5.48:0,5,61	0/1:69,0:21:24.14:24,0,131	0/0:34,0:32:73.16:0,73,1008	0/0:18,0:17:38.80:0,39,433	0/0:9,0:9:17.56:0,18,152	0/0:32,0:29:74.70:0,75,844	0/0:20,0:18:45:0,45,514	0/0:25,0:24:67.45:0,67,776	0/0:27,0:27:75.04:0,75,874	0/0:10,0:9:18.03:0,18,219	0/0:11,0:9:27.01:0,27,272	0/0:20,0:19:47.88:0,48,537	0/0:20,0:17:44.91:0,45,451	0/0:22,0:22:63.08:0,63,730	1/1:11,7:16:29.66:346,30,0	0/0:16,0:15:43.76:0,44,445	0/0:20,0:17:44.93:0,45,500	0/0:26,0:25:69.34:0,69,673	0/0:9,0:9:17.83:0,18,196	0/0:11,0:11:29.80:0,30,354	0/0:20,0:20:53.32:0,53,536	0/0:9,0:9:27.06:0,27,331	0/0:21,0:20:50.55:0,51,587	0/1:11,7:16:1.65:398,0,2	1/1:8,5:6:5.91:66,6,0	1/1:6,6:11:32.99:419,33,0
chr10	478408	.	TTC	T	68.58	PASS	AB=0.922;AC=10;AF=0.200;AN=50;BaseQRankSum=2.645;DP=367;FS=6.503;HRun=0;HaplotypeScore=41.2093;InbreedingCoeff=-0.1772;MQ=61.42;MQ0=40;MQRankSum=-0.942;QD=0.62;ReadPosRankSum=-0.300;VQSLOD=0.3489;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:9,0:6:0:0,0,0	0/0:7,0:7:15.04:0,15,192	0/0:42,0:16:6.42:0,6,65	0/0:72,0:23:15:0,15,152	0/1:8,0:6:27.62:28,0,31	0/1:3,2:4:37.05:59,0,37	0/1:10,1:10:24.11:24,0,230	0/1:19,0:18:1.66:2,0,43	./.	0/0:8,0:5:15.05:0,15,222	0/0:8,0:7:9.03:0,9,136	0/0:7,0:6:8.38:0,8,137	0/1:6,1:6:24.96:25,0,74	0/1:13,1:12:6.97:7,0,330	0/0:15,0:13:30.10:0,30,460	0/1:13,1:12:3.97:4,0,384	./.	0/1:4,0:4:24.39:24,0,83	./.	0/0:10,0:10:18.05:0,18,256	0/1:15,1:14:18.11:18,0,322	0/0:7,2:7:6.01:0,6,69	0/0:11,0:9:6.02:0,6,88	0/0:7,0:7:21.07:0,21,321	0/0:13,0:11:24.08:0,24,369	0/0:7,0:8:15:0,15,148	0/0:5,0:14:18.02:0,18,205	0/0:3,0:4:6:0,6,52
chr10	478559	.	CCT	C	125.85	PASS	AB=0.929;AC=15;AF=0.469;AN=32;BaseQRankSum=1.194;DP=406;FS=0.000;HRun=0;HaplotypeScore=34.6581;InbreedingCoeff=0.3312;MQ=43.56;MQ0=87;MQRankSum=0.986;QD=1.23;ReadPosRankSum=1.297;VQSLOD=1.0577;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:25:5.85:46,6,0	./.	./.	./.	1/1:12,0:10:3.01:31,3,0	1/1:6,1:5:3.01:32,3,0	0/0:18,0:16:2.88:0,3,34	./.	./.	0/0:12,0:9:3:0,3,27	./.	./.	./.	1/1:8,2:9:3.01:32,3,0	0/0:10,0:10:3.01:0,3,41	1/1:9,0:8:3.01:32,3,0	1/1:10,0:9:5.33:23,5,0	0/0:13,0:9:3.90:0,4,46	0/0:10,0:8:3.01:0,3,44	./.	0/1:12,1:13:23.60:24,0,61	./.	1/1:7,0:5:2.98:21,3,0	0/0:9,0:6:3.01:0,3,44	./.	0/0:24,0:19:11.70:0,12,110	0/0:13,0:11:5.67:0,6,34	./.
chr10	478655	.	GCTCTCTCTCTCTCT	G	964.98	PASS	AC=4;AF=0.080;AN=50;BaseQRankSum=4.796;DP=528;FS=2.619;HRun=0;HaplotypeScore=95.1082;InbreedingCoeff=0.5848;MQ=34.54;MQ0=91;MQRankSum=-2.753;QD=30.16;ReadPosRankSum=0.126;VQSLOD=2.4983;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:37:11.29:0,11,391	0/0:3,0:2:3.01:0,3,119	./.	./.	0/0:15,0:10:9.03:0,9,599	0/0:15,0:14:18.06:0,18,958	0/0:24,0:13:11.97:0,12,461	1/1:6,4:8:9.02:115,9,0	1/1:6,16:17:27.06:961,27,0	0/0:18,0:13:33.10:0,33,1799	./.	0/0:15,0:14:12.93:0,13,723	0/0:19,0:18:30.55:0,31,1580	0/0:21,0:18:15.46:0,15,907	0/0:29,0:30:44.93:0,45,2251	0/0:21,0:18:6.09:0,6,1008	0/0:32,0:33:9.03:0,9,536	0/0:17,0:14:24.02:0,24,921	0/0:14,0:10:20.98:0,21,415	0/0:10,0:10:3.01:0,3,144	0/0:25,0:21:9.97:0,10,364	0/0:10,0:6:6.02:0,6,365	0/0:11,0:6:9.03:0,9,311	0/0:23,0:19:10.09:0,10,663	0/0:10,0:8:6.02:0,6,280	0/0:20,0:9:24.03:0,24,928	0/0:10,0:10:24.08:0,24,1022	0/0:5,0:2:0:0,0,0
chr10	484285	.	TTCTGTCTGTCTGTCTG	T	789.27	PASS	AC=6;AF=0.111;AN=54;BaseQRankSum=4.875;DP=497;FS=0.000;HRun=0;HaplotypeScore=209.5704;InbreedingCoeff=0.6918;MQ=71.11;MQ0=6;MQRankSum=-1.427;QD=15.18;ReadPosRankSum=0.872;VQSLOD=2.3736;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:3,4:7:0:0,0,0	0/0:16,0:16:36.11:0,36,1934	0/0:30,0:24:7.55:0,8,80	0/0:20,0:17:2.90:0,3,16	0/0:14,0:14:24.08:0,24,1350	0/0:15,0:15:21.05:0,21,713	0/0:25,0:26:33.09:0,33,1683	0/0:18,0:17:24.01:0,24,361	0/0:12,0:12:5.97:0,6,169	0/0:16,0:16:30.09:0,30,1083	0/0:16,0:16:30.56:0,31,1538	0/0:17,0:17:18.06:0,18,1016	0/0:19,0:19:27.01:0,27,978	0/0:12,0:12:18.04:0,18,909	0/0:24,0:24:36.12:0,36,1916	0/0:10,0:18:6.49:0,6,204	1/1:8,6:13:3.01:132,3,0	0/0:11,0:11:24.04:0,24,894	0/0:16,0:16:24.08:0,24,974	0/0:25,0:24:48.13:0,48,2139	0/0:28,0:28:42.14:0,42,2144	0/0:23,0:23:45.15:0,45,2146	0/0:17,0:17:30.10:0,30,1520	0/0:26,0:26:33.57:0,34,1553	0/0:18,0:18:27.05:0,27,1134	1/1:19,0:19:21.06:651,21,0	1/1:19,0:19:3.01:125,3,0	./.
chr10	484311	.	CTGTCTGTCTGTCTG	C	784.88	PASS	AB=0.789;AC=4;AF=0.074;AN=54;BaseQRankSum=6.233;DP=390;FS=2.306;HRun=0;HaplotypeScore=136.4854;InbreedingCoeff=0.3582;MQ=48.15;MQ0=15;MQRankSum=-0.021;QD=22.43;ReadPosRankSum=-1.713;VQSLOD=2.4521;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:7:0:0,0,0	0/0:14,0:14:39.13:0,39,2047	0/0:10,0:4:11.25:0,11,194	0/0:7,0:4:11.81:0,12,122	0/0:11,0:11:24.08:0,24,1374	0/0:15,0:14:21.07:0,21,858	0/0:21,0:20:36.07:0,36,1801	0/0:23,0:20:44.59:0,45,1013	0/0:9,0:8:6.02:0,6,190	0/0:14,0:14:42.14:0,42,1582	0/0:13,0:12:30.57:0,31,1612	0/0:13,0:12:21.07:0,21,1087	0/0:15,0:15:27.09:0,27,1158	0/0:11,0:10:18.06:0,18,939	0/0:22,0:21:39.13:0,39,2022	0/0:13,0:13:6.49:0,6,222	0/1:10,0:9:62.35:78,0,62	0/0:10,0:10:30.10:0,30,1101	0/0:14,0:12:30.10:0,30,1278	0/0:22,0:19:52.06:0,52,2368	0/0:23,0:21:45.15:0,45,2257	0/0:17,0:17:45.15:0,45,2309	0/0:16,0:14:30.10:0,30,1609	0/0:20,0:20:36.11:0,36,1647	0/0:15,0:15:30.10:0,30,1258	1/1:1,11:14:2.29:688,2,0	0/1:3,8:11:6.81:119,0,7	./.
chr10	486026	.	G	GGAGGGGAAGAA	10226.86	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-9.239;DP=614;FS=11.164;HRun=0;HaplotypeScore=169.3473;InbreedingCoeff=0.9822;MQ=59.93;MQ0=6;MQRankSum=-9.941;QD=69.57;ReadPosRankSum=-2.096;VQSLOD=3.7813;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,30:37:40.86:2103,41,0	0/0:8,0:8:24.07:0,24,638	0/0:45,0:15:29.79:0,30,479	0/0:62,0:19:16.58:0,17,422	0/0:13,0:13:30.10:0,30,960	0/0:28,0:28:72.21:0,72,2023	0/0:25,0:25:63.19:0,63,1816	1/1:19,0:33:86.78:2143,87,0	1/1:2,8:11:21.07:1035,21,0	0/0:23,0:23:66.23:0,66,2024	0/0:19,0:19:42.13:0,42,1228	0/0:15,0:15:36.12:0,36,1196	0/0:25,0:25:66.20:0,66,1896	0/0:12,0:12:36.11:0,36,1140	0/0:32,0:32:90.29:0,90,2677	0/0:24,0:24:63.16:0,63,1696	1/1:3,15:18:15.02:687,15,0	0/0:18,0:19:37.81:0,38,1331	0/0:10,0:10:12.04:0,12,301	0/0:19,0:19:45.15:0,45,1379	0/0:18,0:18:42.12:0,42,1176	0/0:19,0:19:54.18:0,54,1708	0/0:12,0:12:33.11:0,33,1054	0/0:23,0:23:54.03:0,54,1745	0/0:15,0:15:42.14:0,42,1277	1/1:2,17:25:63.15:2306,63,0	1/1:4,9:15:27.56:1284,28,0	1/1:0,6:7:12.04:669,12,0
chr10	492155	.	AAC	A	282.31	PASS	AB=0.989;AC=20;AF=0.385;AN=52;BaseQRankSum=2.134;DP=488;FS=6.523;HRun=0;HaplotypeScore=83.1336;InbreedingCoeff=-0.0593;MQ=63.90;MQ0=15;MQRankSum=-1.646;QD=1.03;ReadPosRankSum=-0.405;VQSLOD=0.6316;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:26:0.94:2,1,0	0/0:2,0:2:6.01:0,6,68	./.	./.	0/0:14,0:14:8.96:0,9,105	0/1:19,0:19:12.20:12,0,107	0/1:26,0:26:14.91:15,0,127	0/0:19,0:19:0:0,0,0	1/1:11,0:11:2.99:23,3,0	0/1:15,0:15:44.64:45,0,118	0/0:11,0:10:3.01:0,3,44	0/0:20,0:20:5.72:0,6,83	0/1:18,1:19:32.51:64,0,33	0/0:16,0:16:11.60:0,12,118	0/1:22,0:22:8.72:9,0,182	0/1:17,0:17:70.57:71,0,150	1/1:22,1:24:6:54,6,0	0/0:17,0:15:20.63:0,21,223	0/0:15,0:14:2.22:0,2,7	0/1:15,0:14:16.33:16,0,127	0/0:25,0:21:6.75:0,7,72	0/0:19,4:22:5.94:0,6,143	0/0:13,1:13:2.52:0,3,42	0/1:31,0:29:37.41:37,0,205	0/1:19,0:19:28.76:29,0,106	0/1:14,0:14:2.22:7,0,2	1/1:6,0:10:1.55:21,2,0	1/1:2,0:2:2.94:18,3,0
chr10	492205	.	CAG	C	241.54	PASS	AB=1.000;AC=12;AF=0.214;AN=56;BaseQRankSum=5.401;DP=646;FS=59.137;HRun=0;HaplotypeScore=105.7433;InbreedingCoeff=-0.1946;MQ=45.98;MQ0=49;MQRankSum=-1.048;QD=0.97;ReadPosRankSum=0.288;VQSLOD=-0.4684;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:2.63:0,3,23	0/0:5,0:3:8.86:0,9,91	0/0:18,0:2:2.80:0,3,13	0/0:23,0:6:16.80:0,17,113	0/0:21,0:20:22.52:0,23,223	0/1:21,0:20:22.07:22,0,119	0/0:36,0:33:11.06:0,11,288	0/1:22,0:20:49.03:49,0,49	1/1:15,0:15:0.39:4,0,0	0/0:20,0:20:7.12:0,7,326	0/0:22,4:25:32.48:0,32,263	0/0:28,0:27:22.19:0,22,316	0/1:24,0:24:64.13:64,0,239	0/0:24,0:22:29.93:0,30,323	0/1:21,0:20:15.66:16,0,325	0/1:19,0:18:46.98:47,0,261	0/1:25,0:22:29.70:30,0,63	0/0:30,0:27:55.82:0,56,512	0/0:19,0:19:22.02:0,22,293	0/0:23,0:19:26.64:0,27,301	0/1:31,0:26:12.84:13,0,273	0/0:25,0:22:8.37:0,8,208	0/0:27,0:26:47.41:0,47,389	0/0:34,0:31:12.44:0,12,465	0/1:25,0:25:48.80:49,0,261	0/1:25,0:23:49.67:50,0,178	0/1:21,0:18:40.26:40,0,129	0/0:8,0:7:9.09:0,9,104
chr10	492207	.	GAC	G	797.49	PASS	AB=1.000;AC=12;AF=0.214;AN=56;BaseQRankSum=7.435;DP=653;FS=25.002;HRun=0;HaplotypeScore=105.1885;InbreedingCoeff=0.3977;MQ=46.22;MQ0=46;MQRankSum=-5.704;QD=4.66;ReadPosRankSum=-0.667;VQSLOD=0.9147;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:31,0:31:0:0,0,0	0/1:5,0:3:1.83:2,0,56	0/0:19,0:2:2.97:0,3,20	0/0:26,0:6:17.54:0,18,218	0/0:22,0:21:26.23:0,26,344	0/0:21,0:20:8.40:0,8,248	0/0:36,0:33:40.72:0,41,547	1/1:18,4:20:44.26:351,44,0	1/1:15,0:15:11.73:78,12,0	0/0:19,0:19:36.83:0,37,534	0/0:27,0:26:35.81:0,36,493	0/0:28,0:27:41.42:0,41,554	0/0:24,0:24:2.62:0,3,429	0/0:24,0:22:30.15:0,30,528	0/0:21,0:20:11.08:0,11,463	0/1:19,0:18:0.21:0,0,334	1/1:24,1:22:22.20:176,22,0	0/0:28,0:25:56.01:0,56,836	0/0:21,0:21:42.80:0,43,565	0/0:24,0:21:35.07:0,35,499	0/0:31,0:27:48.92:0,49,652	0/0:25,0:22:32.05:0,32,368	0/0:27,0:26:23.92:0,24,675	0/0:32,0:29:41.17:0,41,795	0/0:27,0:27:2.20:0,2,520	0/1:24,0:23:99:184,0,151	0/1:21,0:18:89.73:137,0,90	0/1:8,0:7:18.97:19,0,99
chr10	492211	.	C	CAG	58.20	PASS	AB=0.800;AC=6;AF=0.107;AN=56;BaseQRankSum=5.677;DP=668;FS=23.642;HRun=0;HaplotypeScore=116.3864;InbreedingCoeff=0.5630;MQ=46.56;MQ0=45;MQRankSum=-3.468;QD=0.58;ReadPosRankSum=-2.947;VQSLOD=-0.1354;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:11,22:33:0.11:0,0,0	0/0:5,0:3:8.76:0,9,100	0/0:20,0:2:5.75:0,6,49	0/0:28,0:6:18.05:0,18,249	0/0:22,0:21:32.98:0,33,454	0/0:22,0:21:26.30:0,26,356	0/0:34,0:31:42.12:0,42,596	1/1:24,0:22:10.84:109,11,0	1/1:15,1:16:0.34:19,0,0	0/0:19,0:19:50.37:0,50,671	0/0:26,0:26:36.04:0,36,500	0/0:28,0:27:42.39:0,42,576	0/0:25,0:25:43.56:0,44,556	0/0:24,0:22:42.13:0,42,598	0/0:21,0:20:43.87:0,44,563	0/0:20,0:19:38.49:0,38,485	0/1:28,0:25:21.73:39,0,22	0/0:30,0:27:69.66:0,70,981	0/0:22,0:22:56.48:0,56,718	0/0:23,0:20:48.60:0,49,651	0/0:31,0:27:54.15:0,54,761	0/0:25,0:22:33.10:0,33,460	0/0:27,0:26:57.63:0,58,818	0/0:33,0:31:72.05:0,72,976	0/0:27,0:27:51.95:0,52,660	0/0:24,0:23:35.37:0,35,242	0/0:22,0:19:33.74:0,34,213	0/0:8,0:7:12.55:0,13,111
chr10	492218	.	A	AGAGA	540.31	PASS	AB=1.000;AC=10;AF=0.179;AN=56;BaseQRankSum=6.759;DP=683;FS=35.796;HRun=0;HaplotypeScore=137.3944;InbreedingCoeff=0.6654;MQ=48.09;MQ0=47;MQRankSum=-4.803;QD=3.89;ReadPosRankSum=-3.634;VQSLOD=-0.1456;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:32,0:32:2.99:23,3,0	0/0:4,0:2:6.01:0,6,77	1/1:26,0:3:1.55:4,2,0	0/0:36,0:7:17.86:0,18,186	0/0:22,0:22:24.07:0,24,387	0/0:22,0:21:15.41:0,15,220	0/0:34,0:31:36.09:0,36,549	1/1:23,0:23:35.15:419,35,0	1/1:6,10:17:3.01:64,3,0	0/0:18,0:18:30.08:0,30,441	0/0:25,0:25:33.11:0,33,534	0/0:26,0:25:35.12:0,35,512	0/0:26,0:26:21.43:0,21,500	0/0:24,0:21:36.01:0,36,531	0/0:19,0:18:27.09:0,27,435	0/0:24,0:23:27.05:0,27,357	0/1:30,0:26:2.29:160,0,2	0/0:29,0:26:43.10:0,43,858	0/0:21,0:21:38.22:0,38,519	0/0:23,0:22:33.10:0,33,512	0/0:31,0:27:48.06:0,48,748	0/0:25,0:22:24.04:0,24,341	0/0:27,0:27:57.18:0,57,867	0/0:31,0:30:51.62:0,52,775	0/0:28,0:28:42.05:0,42,634	0/0:25,0:24:25.32:0,25,349	0/0:23,0:21:27.26:0,27,323	0/1:11,0:9:1.60:2,0,160
chr10	496962	.	AG	A	5212.41	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=13.251;DP=578;FS=7.030;HRun=2;HaplotypeScore=53.7398;InbreedingCoeff=0.9940;MQ=75.66;MQ0=0;MQRankSum=-0.941;QD=32.78;ReadPosRankSum=1.436;VQSLOD=4.5444;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,39:39:99:1283,99,0	0/0:12,0:12:36.12:0,36,537	0/0:14,0:14:34.36:0,34,489	0/0:9,0:9:27.02:0,27,356	0/0:35,0:35:99:0,105,1504	0/0:29,0:29:84.26:0,84,1217	0/0:14,0:14:39.08:0,39,505	1/1:0,18:18:48.11:556,48,0	1/1:0,19:19:48.16:622,48,0	0/0:19,0:19:57.19:0,57,838	0/0:23,0:23:66.17:0,66,923	0/0:18,0:18:54.15:0,54,767	0/0:24,0:24:72.19:0,72,1032	0/0:17,0:17:51.16:0,51,745	0/0:17,0:17:51.16:0,51,740	0/0:23,0:23:69.21:0,69,991	1/1:1,25:26:69.22:894,69,0	0/0:21,0:21:60.11:0,60,821	0/0:22,0:22:63.14:0,63,840	0/0:26,0:26:75.24:0,75,1100	0/0:21,0:21:60.16:0,60,838	0/0:13,0:13:39.12:0,39,560	0/0:17,0:17:50.94:0,51,689	0/0:22,0:21:66.17:0,66,942	0/0:23,0:23:69.22:0,69,1014	1/1:1,18:19:12.23:613,12,0	1/1:0,29:29:72.23:933,72,0	1/1:0,9:9:24.08:311,24,0
chr10	498054	.	T	TTGTG	5648.42	PASS	AB=0.746;AC=10;AF=0.179;AN=56;BaseQRankSum=-10.274;DP=903;FS=0.903;HRun=0;HaplotypeScore=148.0828;InbreedingCoeff=0.8010;MQ=70.04;MQ0=6;MQRankSum=-1.745;QD=32.28;ReadPosRankSum=1.249;VQSLOD=4.6646;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:17,27:48:74.73:1717,75,0	0/0:12,0:14:33.10:0,33,523	0/0:50,0:28:28.67:0,29,397	0/1:27,0:18:1.58:2,0,170	0/0:27,0:27:63.21:0,63,1035	0/0:22,0:24:66.21:0,66,1041	0/0:26,0:30:68.54:0,69,1168	0/0:41,0:41:84.39:0,84,1377	0/0:6,0:29:57.07:0,57,531	0/0:29,0:29:63.21:0,63,1017	0/0:37,0:37:75.25:0,75,1238	0/0:42,0:43:99:0,108,1723	0/0:35,0:36:81.25:0,81,1288	0/0:32,0:32:75.24:0,75,1201	0/0:38,0:40:99:0,102,1613	0/0:28,0:28:66.22:0,66,1065	1/1:8,22:33:54.19:1324,54,0	0/0:15,0:15:36.12:0,36,594	0/0:20,0:20:27.09:0,27,445	0/0:31,0:31:60.19:0,60,945	0/0:67,0:74:99:0,156,2410	0/0:29,0:31:60.20:0,60,963	0/0:33,0:34:62.82:0,63,960	0/0:43,0:44:68.62:0,69,1250	0/0:18,0:18:42.14:0,42,683	1/1:9,11:23:38.87:861,39,0	1/1:10,17:27:52.73:1245,53,0	0/1:4,8:14:19.70:500,0,20
chr10	499162	.	GCCAT	G	7158.34	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=15.540;DP=561;FS=7.992;HRun=0;HaplotypeScore=100.5323;InbreedingCoeff=0.9650;MQ=84.76;MQ0=0;MQRankSum=-9.902;QD=45.89;ReadPosRankSum=1.337;VQSLOD=5.4768;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,24:27:66.23:1212,66,0	0/0:8,0:8:24.08:0,24,632	0/0:19,0:19:57.17:0,57,1332	0/0:20,0:20:47.58:0,48,1102	0/0:27,0:27:75.26:0,75,1950	0/0:22,0:22:63.21:0,63,1609	0/0:13,0:13:33.11:0,33,870	1/1:6,25:31:75.25:1343,75,0	1/1:2,13:15:39.13:717,39,0	0/0:28,0:28:84.29:0,84,2216	0/0:21,0:21:63.22:0,63,1604	0/0:19,0:19:57.20:0,57,1501	0/0:16,0:16:48.15:0,48,1212	0/0:13,0:13:33.11:0,33,803	0/0:21,0:21:57.20:0,57,1445	0/0:12,0:12:36.12:0,36,945	1/1:2,24:26:60.20:1085,60,0	0/0:10,0:10:27.09:0,27,712	0/0:27,0:27:78.24:0,78,1897	0/0:30,0:30:87.28:0,87,2231	0/0:28,0:28:75.26:0,75,1910	0/0:15,0:15:45.15:0,45,1172	0/0:31,0:31:87.30:0,87,2152	0/0:12,0:12:30.10:0,30,757	0/0:13,0:13:39.13:0,39,1030	1/1:3,27:30:4.95:1369,5,0	1/1:1,23:24:69.24:1267,69,0	1/1:0,3:3:9.03:165,9,0
chr10	505837	.	A	AATAC	644.92	PASS	AC=6;AF=0.125;AN=48;BaseQRankSum=0.291;DP=499;FS=2.229;HRun=0;HaplotypeScore=93.6519;InbreedingCoeff=0.8337;MQ=44.29;MQ0=28;MQRankSum=-0.651;QD=9.21;ReadPosRankSum=-0.056;VQSLOD=2.4549;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,12:33:21.07:483,21,0	0/0:8,0:6:6.02:0,6,92	./.	./.	0/0:24,0:21:34.23:0,34,395	0/0:15,0:14:23.91:0,24,264	0/0:13,0:12:5.99:0,6,68	./.	0/0:12,0:19:12.01:0,12,112	0/0:31,0:31:53.99:0,54,590	0/0:15,0:14:28.26:0,28,349	0/0:20,0:20:35.81:0,36,382	0/0:24,0:24:54.08:0,54,735	0/0:17,0:16:27.02:0,27,346	0/0:17,0:16:32.87:0,33,345	1/1:11,0:16:6.02:104,6,0	1/1:20,0:16:17.77:186,18,0	0/0:15,0:15:33:0,33,373	0/0:18,0:13:9.02:0,9,120	0/0:29,0:28:48:0,48,609	0/0:13,0:12:24.07:0,24,349	0/0:17,0:17:29.95:0,30,335	0/0:13,0:13:21.01:0,21,258	0/0:4,0:4:8.95:0,9,87	0/0:21,0:20:39:0,39,499	0/0:17,0:15:27.03:0,27,274	0/0:24,0:24:43.81:0,44,380	./.
chr10	505840	.	AC	A	175.28	PASS	AB=0.840;AC=3;AF=0.054;AN=56;BaseQRankSum=7.918;DP=506;FS=5.117;HRun=1;HaplotypeScore=78.2677;InbreedingCoeff=-0.0715;MQ=43.39;MQ0=15;MQRankSum=1.668;QD=3.02;ReadPosRankSum=0.065;VQSLOD=-0.2604;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:33:54.15:0,54,707	0/0:6,0:6:12.04:0,12,189	0/0:5,0:2:6.02:0,6,91	0/0:6,0:2:6.02:0,6,79	0/0:23,0:22:51.17:0,51,803	0/0:16,0:16:30.10:0,30,473	0/0:12,0:12:36.12:0,36,549	0/0:43,0:30:90.23:0,90,1294	0/0:19,0:19:19.31:0,19,235	0/0:33,0:33:96.14:0,96,1428	0/1:15,0:14:6.63:7,0,444	0/0:21,0:21:47.95:0,48,724	0/0:25,0:25:63.21:0,63,997	0/0:18,0:17:36.12:0,36,569	0/0:14,0:14:33.11:0,33,524	0/0:16,0:16:18.05:0,18,243	0/0:19,0:16:35.85:0,36,374	0/0:15,0:15:42.14:0,42,663	0/0:18,0:13:39.13:0,39,598	0/0:30,0:29:81.23:0,81,1244	0/0:13,0:13:39.13:0,39,618	0/0:17,0:17:36.12:0,36,572	0/0:14,0:14:27.09:0,27,426	0/0:4,0:4:9.03:0,9,143	0/0:21,0:21:45.11:0,45,688	0/1:14,5:18:98.40:99,0,98	0/1:15,9:24:54.44:163,0,54	0/0:6,0:5:3.39:0,3,45
chr10	505842	.	ATAC	A	389.66	PASS	AB=0.882;AC=4;AF=0.071;AN=56;BaseQRankSum=8.064;DP=512;FS=10.210;HRun=0;HaplotypeScore=93.6139;InbreedingCoeff=-0.0824;MQ=43.53;MQ0=15;MQRankSum=0.708;QD=5.73;ReadPosRankSum=1.302;VQSLOD=1.6874;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:34:54.18:0,54,851	0/0:6,0:6:12.04:0,12,245	0/0:5,0:2:6.02:0,6,78	0/0:7,0:3:6.91:0,7,101	0/0:23,0:22:51.17:0,51,1051	0/0:16,0:16:30.10:0,30,633	0/0:12,0:12:36.12:0,36,520	0/0:40,0:27:81.21:0,81,1004	0/1:18,0:18:8.84:9,0,134	0/0:32,0:32:96.06:0,96,1818	0/0:15,0:14:19.24:0,19,707	0/0:22,0:22:50.84:0,51,996	0/0:26,0:26:63.21:0,63,1414	0/0:20,0:19:39.13:0,39,821	0/0:16,0:16:33.11:0,33,742	0/0:17,0:17:21.07:0,21,340	0/0:19,0:16:38.82:0,39,534	0/0:17,0:17:42.14:0,42,879	0/0:18,0:13:39.13:0,39,611	0/0:30,0:29:84.28:0,84,1677	0/0:13,0:13:39.13:0,39,846	0/0:17,0:17:36.12:0,36,786	0/0:13,0:13:27.09:0,27,567	0/0:4,0:4:9.03:0,9,204	0/0:21,0:21:45.15:0,45,1042	0/1:15,5:19:99:190,0,121	0/1:15,9:24:33.38:284,0,33	0/1:6,0:5:6.94:7,0,37
chr10	505981	.	A	AAAAG	1397.35	PASS	AB=1.000;AC=27;AF=0.643;AN=42;BaseQRankSum=-2.157;DP=461;FS=7.045;HRun=0;HaplotypeScore=77.2592;InbreedingCoeff=0.4323;MQ=51.65;MQ0=14;MQRankSum=2.031;QD=5.55;ReadPosRankSum=-0.607;VQSLOD=1.0562;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:20:5.99:65,0,6	1/1:10,0:10:2.97:20,3,0	./.	./.	./.	0/1:17,0:16:5.87:91,0,6	./.	./.	0/0:9,0:9:2.22:0,2,7	1/1:14,1:18:2.23:67,2,0	./.	1/1:11,0:11:9.03:171,9,0	1/1:18,0:18:12.04:156,12,0	1/1:16,9:25:6.02:137,6,0	0/0:24,0:24:18.03:0,18,204	0/0:18,0:18:8.98:0,9,89	1/1:20,0:18:7.34:152,7,0	1/1:10,1:11:6.02:115,6,0	1/1:14,0:13:8.95:76,9,0	1/1:20,4:22:9.03:203,9,0	1/1:11,3:14:6.02:137,6,0	./.	1/1:16,0:16:9.01:105,9,0	1/1:12,0:12:3.01:36,3,0	0/0:27,0:27:15.05:0,15,199	0/1:18,0:17:16.06:16,0,21	0/0:26,0:24:6:0,6,54	0/0:9,0:7:12.02:0,12,115
chr10	506050	.	AAAGC	A	1231.45	PASS	AB=0.882;AC=8;AF=0.148;AN=54;BaseQRankSum=4.986;DP=489;FS=4.931;HRun=0;HaplotypeScore=85.0922;InbreedingCoeff=0.3800;MQ=50.06;MQ0=15;MQRankSum=2.105;QD=9.85;ReadPosRankSum=3.244;VQSLOD=1.9882;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:28:9.04:326,0,9	0/0:9,0:9:26.85:0,27,206	0/0:10,0:3:9.02:0,9,96	./.	0/0:18,0:16:41.56:0,42,296	0/0:14,0:13:38.68:0,39,307	0/0:15,0:14:38.67:0,39,286	0/0:24,0:22:65.87:0,66,539	0/1:1,9:10:12.98:47,0,13	0/0:24,0:23:36.15:0,36,490	0/0:11,0:10:23.71:0,24,187	0/0:22,0:22:65.45:0,65,601	0/0:16,0:16:44.81:0,45,485	0/0:23,0:23:47.57:0,48,428	0/0:17,0:17:44.75:0,45,559	0/0:17,0:17:47.90:0,48,448	0/1:21,0:21:93.47:205,0,93	0/0:14,0:14:37.88:0,38,377	0/0:19,0:13:35.81:0,36,329	0/0:15,0:15:38.65:0,39,450	0/0:21,0:21:53.98:0,54,547	0/0:15,0:14:41.81:0,42,329	0/0:18,0:17:50.73:0,51,504	0/0:13,0:13:32.82:0,33,286	0/0:24,0:21:56.81:0,57,729	0/1:29,0:27:54.10:502,0,54	1/1:4,20:23:5.75:67,6,0	1/1:2,9:10:12.04:223,12,0
chr10	506225	.	TAC	T	90.75	PASS	AB=0.932;AC=9;AF=0.281;AN=32;BaseQRankSum=3.479;DP=474;FS=9.138;HRun=0;HaplotypeScore=43.4736;InbreedingCoeff=0.1940;MQ=37.74;MQ0=172;MQRankSum=0.042;QD=1.04;ReadPosRankSum=0.713;VQSLOD=0.0804;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	0/1:16,0:12:13.82:14,0,40	0/0:16,0:8:6.02:0,6,86	./.	./.	./.	0/0:17,0:8:6.01:0,6,57	0/0:15,2:14:5.36:0,5,32	0/1:19,1:14:25.12:25,0,38	./.	0/0:17,0:8:2.99:0,3,23	./.	0/0:14,0:10:9:0,9,93	1/1:16,4:12:6.02:63,6,0	1/1:7,2:4:2.95:19,3,0	0/0:8,0:2:2.04:0,2,6	0/0:13,0:12:6.01:0,6,69	./.	0/0:9,0:5:3.01:0,3,44	./.	0/0:23,0:18:5.97:0,6,63	0/0:15,0:12:9:0,9,93	./.	1/1:10,2:6:3.01:32,3,0	0/1:8,1:6:3.95:47,0,4
chr10	506554	.	T	TAA	290.56	PASS	AB=0.889;AC=4;AF=0.071;AN=56;BaseQRankSum=0.842;DP=433;FS=0.000;HRun=13;HaplotypeScore=62.8522;InbreedingCoeff=0.4487;MQ=49.29;MQ0=35;MQRankSum=-0.199;QD=6.46;ReadPosRankSum=-1.753;VQSLOD=-0.5831;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:19:29.37:0,29,242	0/0:5,0:5:11.97:0,12,105	0/1:14,0:2:0:0,0,0	0/0:18,0:9:0.95:0,1,33	0/0:20,0:19:29.53:0,30,264	0/0:11,0:12:20.81:0,21,225	0/0:9,0:8:20.95:0,21,178	0/1:15,6:14:13.07:238,0,13	1/1:3,5:9:12.03:151,12,0	0/0:9,0:7:11.89:0,12,105	0/0:13,0:13:20.72:0,21,177	0/0:9,0:9:20.96:0,21,185	0/0:15,0:14:26.64:0,27,224	0/0:14,0:14:29.93:0,30,260	0/0:17,0:16:26.96:0,27,237	0/0:10,0:9:11.80:0,12,105	0/0:26,0:22:41.56:0,42,352	0/0:24,0:22:56.05:0,56,435	0/0:23,0:18:14.11:0,14,171	0/0:20,0:19:26.71:0,27,231	0/0:7,0:6:12:0,12,106	0/0:12,0:9:3.60:0,4,72	0/0:7,0:6:5.91:0,6,53	0/0:18,0:18:38.86:0,39,343	0/0:19,0:17:29.79:0,30,262	0/0:31,0:31:23.81:0,24,309	0/0:12,0:12:23.95:0,24,211	0/0:14,0:15:20.38:0,20,167
chr10	508062	.	TA	T	1732	PASS	AB=0.921;AC=16;AF=0.286;AN=56;BaseQRankSum=3.379;DP=511;FS=10.037;HRun=13;HaplotypeScore=50.8978;InbreedingCoeff=0.7246;MQ=56.76;MQ0=38;MQRankSum=-2.970;QD=9.84;ReadPosRankSum=2.033;VQSLOD=1.9978;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,22:24:47.58:345,48,0	0/0:9,2:11:5.27:0,5,212	0/0:22,0:10:8.96:0,9,121	0/0:15,0:6:6.01:0,6,59	0/0:25,0:27:71.77:0,72,664	0/0:16,1:20:19.77:0,20,311	0/0:15,0:15:35.97:0,36,334	1/1:7,15:16:41.72:302,42,0	1/1:4,14:17:29.83:219,30,0	0/0:28,2:31:33.18:0,33,572	0/0:21,1:22:53.70:0,54,484	0/0:17,0:16:33:0,33,308	0/0:8,0:7:15.02:0,15,146	0/0:13,0:12:32.91:0,33,296	0/0:17,0:15:30:0,30,282	0/1:15,1:15:12.58:13,0,199	1/1:0,15:15:44.74:328,45,0	0/0:12,2:13:5.12:0,5,205	0/0:12,0:9:20.82:0,21,174	0/0:28,1:24:37.86:0,38,503	0/1:8,1:8:0.92:1,0,144	0/0:7,0:7:18.02:0,18,172	0/0:18,2:18:0.59:0,1,296	0/0:8,0:7:21.03:0,21,204	0/0:13,0:14:36.99:0,37,315	1/1:12,14:23:9.49:265,9,0	1/1:7,19:24:9.49:233,9,0	1/1:5,12:17:6.70:212,7,0
chr10	509393	.	T	TGACA	2109.93	PASS	AC=4;AF=0.077;AN=52;BaseQRankSum=-7.009;DP=805;FS=3.372;HRun=0;HaplotypeScore=104.0350;InbreedingCoeff=0.9896;MQ=46.95;MQ0=95;MQRankSum=-3.295;QD=33.49;ReadPosRankSum=-2.312;VQSLOD=3.2235;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:47:99:0,121,2164	0/0:16,0:15:36.12:0,36,662	./.	./.	0/0:32,0:29:57.20:0,57,1038	0/0:27,0:26:69.21:0,69,1208	0/0:33,0:26:51.17:0,51,905	1/1:19,15:21:42.07:885,42,0	1/1:6,22:28:51.18:1345,51,0	0/0:26,0:21:54.17:0,54,953	0/0:16,0:15:27.09:0,27,496	0/0:29,0:29:69.19:0,69,1166	0/0:27,0:27:50.80:0,51,938	0/0:28,0:26:69.24:0,69,1269	0/0:29,0:29:66.19:0,66,1179	0/0:34,0:32:84.29:0,84,1535	0/0:28,0:27:72.25:0,72,1312	0/0:20,0:18:51.17:0,51,938	0/0:28,0:18:51.17:0,51,932	0/0:23,0:18:48.16:0,48,883	0/0:55,0:53:99:0,99,1820	0/0:24,0:22:27.08:0,27,467	0/0:25,0:22:39.13:0,39,707	0/0:31,0:31:66.21:0,66,1183	0/0:16,0:13:15.05:0,15,276	0/0:33,0:31:86.75:0,87,1493	0/0:33,0:31:60.18:0,60,1074	0/0:10,0:9:24.08:0,24,441
chr10	512295	.	T	TA	1522.56	PASS	AB=0.851;AC=11;AF=0.196;AN=56;BaseQRankSum=-5.055;DP=524;FS=1.071;HRun=12;HaplotypeScore=59.3369;InbreedingCoeff=0.5873;MQ=50.76;MQ0=4;MQRankSum=-2.485;QD=10.65;ReadPosRankSum=0.870;VQSLOD=2.9771;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,25:32:46.22:513,46,0	0/0:8,0:8:14.89:0,15,109	0/0:9,0:7:11.51:0,12,76	0/1:15,0:11:14.76:15,0,34	0/0:21,0:22:41.69:0,42,306	0/0:23,0:23:62.58:0,63,454	0/0:9,0:10:25.90:0,26,181	0/1:4,0:4:0:0,0,0	0/1:5,0:5:0:0,0,0	0/0:18,0:19:43.78:0,44,311	0/0:20,0:20:50.68:0,51,370	0/0:23,0:24:52.69:0,53,374	0/0:21,0:22:49.75:0,50,356	0/0:19,0:19:44.73:0,45,328	0/0:15,0:15:23.74:0,24,171	0/0:15,0:16:31.84:0,32,225	0/1:7,8:18:11.92:109,0,12	0/0:9,0:11:27.89:0,28,183	0/0:28,1:30:38.37:0,38,435	0/0:28,0:32:71.70:0,72,499	0/0:8,0:8:17.89:0,18,131	0/0:22,0:25:54.68:0,55,378	0/0:26,0:26:62.53:0,63,453	0/0:10,0:10:26.85:0,27,197	0/0:28,0:29:49.80:0,50,330	1/1:10,20:30:36.06:501,36,0	1/1:6,20:26:39.22:389,39,0	0/1:5,6:11:19.77:151,0,20
chr10	523549	.	T	TG	674.45	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=4.630;DP=685;FS=26.898;HRun=1;HaplotypeScore=81.9376;InbreedingCoeff=0.7517;MQ=66.05;MQ0=29;MQRankSum=-3.610;QD=8.99;ReadPosRankSum=-1.551;VQSLOD=-0.5527;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:32:34.34:0,34,173	0/0:12,0:12:26.54:0,27,285	0/0:50,0:22:25.91:0,26,355	0/1:35,0:10:15.21:15,0,68	0/0:25,0:25:71.01:0,71,732	0/0:22,0:22:48.56:0,49,639	0/0:15,0:12:36.06:0,36,400	1/1:22,6:21:61.04:689,61,0	1/1:11,0:8:9.02:93,9,0	0/0:25,0:24:66.03:0,66,687	0/0:26,0:26:64.71:0,65,665	0/0:17,0:16:39.06:0,39,422	0/0:24,0:24:66.09:0,66,720	0/0:18,0:18:42.08:0,42,462	0/0:19,0:19:50.12:0,50,566	0/0:25,0:25:63.60:0,64,734	0/0:24,0:20:21.51:0,22,136	0/0:21,0:21:57.15:0,57,691	0/0:23,0:20:53.58:0,54,579	0/0:29,0:30:68.37:0,68,705	0/0:26,0:25:59.54:0,60,613	0/0:28,0:27:57.72:0,58,656	0/0:23,0:23:57.53:0,58,603	0/0:24,0:24:56.25:0,56,625	0/0:27,0:27:69.91:0,70,750	0/0:26,0:25:53.38:0,53,310	0/0:32,0:30:46.31:0,46,264	0/0:10,0:10:18.98:0,19,95
chr10	523550	.	G	GTT	2555	PASS	AB=0.969;AC=16;AF=0.286;AN=56;BaseQRankSum=1.995;DP=686;FS=4.250;HRun=14;HaplotypeScore=85.2785;InbreedingCoeff=0.7531;MQ=66.22;MQ0=24;MQRankSum=-1.759;QD=10.74;ReadPosRankSum=-4.838;VQSLOD=1.4579;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:12,20:32:37.20:396,37,0	0/0:8,0:12:2.78:0,3,108	0/0:47,0:23:18.26:0,18,164	0/1:33,0:10:5.69:6,0,10	0/0:24,0:25:35.22:0,35,323	0/0:22,0:22:16.77:0,17,331	0/0:15,0:12:26.83:0,27,225	1/1:11,0:22:54.95:571,55,0	1/1:1,0:12:9.02:102,9,0	0/0:23,0:24:11.16:0,11,228	0/0:23,0:26:27.95:0,28,300	0/0:14,0:15:23.57:0,24,186	0/0:22,0:24:43.28:0,43,345	0/0:17,0:17:26.44:0,26,212	0/0:16,0:19:24.39:0,24,304	0/0:24,0:25:32.49:0,32,410	1/1:15,5:20:46.40:467,46,0	0/0:21,0:21:50.80:0,51,425	0/0:21,0:20:20.27:0,20,244	0/0:22,0:28:1.38:0,1,277	0/0:24,0:25:27.91:0,28,275	0/1:25,1:27:49.19:49,0,242	0/0:20,0:23:29.26:0,29,270	0/0:20,0:23:8.86:0,9,284	0/0:28,0:28:15.47:0,15,297	1/1:12,3:25:52.03:471,52,0	1/1:10,21:31:40.85:465,41,0	1/1:3,6:10:18.05:222,18,0
chr10	534860	.	G	GC	2491.47	PASS	AC=8;AF=0.167;AN=48;BaseQRankSum=-2.400;DP=694;FS=3.322;HRun=2;HaplotypeScore=44.5693;InbreedingCoeff=0.9359;MQ=32.09;MQ0=242;MQRankSum=-1.586;QD=15.57;ReadPosRankSum=0.848;VQSLOD=3.5087;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:17,41:35:60.20:860,60,0	0/0:14,0:7:18.06:0,18,223	./.	./.	0/0:25,0:13:14.76:0,15,125	0/0:18,0:11:27.08:0,27,334	0/0:29,0:14:33.05:0,33,389	0/0:18,0:2:3.01:0,3,37	./.	0/0:29,0:16:45.14:0,45,557	0/0:20,0:13:18.06:0,18,222	0/0:31,0:24:57.18:0,57,704	0/0:26,0:13:36.05:0,36,426	0/0:30,0:20:51.06:0,51,595	0/0:23,0:14:27.08:0,27,334	0/0:21,0:9:24.03:0,24,280	1/1:20,18:18:33.04:449,33,0	0/0:25,0:16:36.11:0,36,446	0/0:27,0:7:18.06:0,18,223	0/0:12,0:8:18.01:0,18,206	0/0:42,0:33:93.13:0,93,1095	0/0:27,0:14:38.04:0,38,422	0/0:21,0:11:21.04:0,21,259	0/0:26,0:17:33.10:0,33,409	0/0:22,0:19:33.04:0,33,389	1/1:6,17:12:36.12:518,36,0	1/1:8,33:26:57.19:818,57,0	./.
chr10	537353	.	TA	T	509.82	PASS	AB=0.707;AC=3;AF=0.054;AN=56;BaseQRankSum=6.987;DP=480;FS=16.934;HRun=4;HaplotypeScore=46.4856;InbreedingCoeff=0.0566;MQ=46.33;MQ0=24;MQRankSum=-1.713;QD=5.31;ReadPosRankSum=0.403;VQSLOD=-0.7309;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:23,24:35:99:325,0,621	0/0:6,0:6:11.99:0,12,145	0/0:14,0:1:3.01:0,3,32	0/0:9,0:1:0:0,0,0	0/0:25,0:25:30.03:0,30,395	0/0:23,0:23:42.14:0,42,588	0/0:20,0:20:33.11:0,33,461	0/0:16,0:10:30.05:0,30,352	0/1:18,9:21:47.74:48,0,228	0/0:27,0:26:78.26:0,78,1092	0/0:15,0:15:30.06:0,30,396	0/0:15,0:15:27.09:0,27,377	0/0:12,0:12:15.05:0,15,209	0/0:12,0:12:21.07:0,21,293	0/0:19,0:19:44.88:0,45,630	0/0:17,0:17:36.12:0,36,503	0/1:13,9:22:99:236,0,326	0/0:9,0:9:12.02:0,12,150	0/0:23,0:18:48.13:0,48,651	0/0:16,0:15:24.08:0,24,335	0/0:13,0:13:24.08:0,24,335	0/0:8,0:7:9.03:0,9,126	0/0:10,0:10:8.98:0,9,103	0/0:9,0:9:21.03:0,21,272	0/0:20,0:20:42.14:0,42,582	0/0:18,0:12:33.11:0,33,462	0/0:23,0:18:48.13:0,48,650	0/0:5,0:5:15.05:0,15,210
chr10	537394	.	A	ACATC	782.03	PASS	AB=0.815;AC=3;AF=0.058;AN=52;BaseQRankSum=4.398;DP=488;FS=61.800;HRun=0;HaplotypeScore=58.1180;InbreedingCoeff=-0.0857;MQ=45.02;MQ0=26;MQRankSum=-4.463;QD=8.89;ReadPosRankSum=-0.440;VQSLOD=-0.4267;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:26,14:25:99:367,0,336	0/0:9,0:9:15.05:0,15,283	./.	./.	0/0:25,0:24:24.07:0,24,422	0/0:18,0:18:27.07:0,27,448	0/0:21,0:21:36.12:0,36,648	0/0:29,0:27:81.22:0,81,1364	0/1:23,5:24:99:229,0,347	0/0:27,0:25:72.23:0,72,1282	0/0:8,0:8:6.02:0,6,114	0/0:21,0:21:30.10:0,30,569	0/0:15,0:15:14.73:0,15,284	0/0:13,0:13:24.08:0,24,455	0/0:21,0:21:39.59:0,40,741	0/0:23,0:23:35.74:0,36,651	0/1:16,3:15:99:285,0,235	0/0:9,0:9:12.04:0,12,228	0/0:18,0:12:36.12:0,36,672	0/0:14,0:14:8.99:0,9,134	0/0:21,0:21:33.11:0,33,625	0/0:6,0:6:6.02:0,6,114	0/0:8,0:8:12.02:0,12,195	0/0:16,0:16:24.08:0,24,410	0/0:13,0:13:24.08:0,24,443	0/0:20,0:12:36.12:0,36,671	0/0:15,0:9:12.04:0,12,207	0/0:6,0:1:3.01:0,3,57
chr10	541812	.	C	CT	341.16	PASS	AB=0.944;AC=4;AF=0.071;AN=56;BaseQRankSum=2.742;DP=432;FS=0.000;HRun=8;HaplotypeScore=79.2937;InbreedingCoeff=0.3437;MQ=74.48;MQ0=6;MQRankSum=-0.274;QD=10.34;ReadPosRankSum=-2.058;VQSLOD=1.9424;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,10:18:39.06:429,39,0	0/1:7,0:7:8.13:8,0,143	0/0:51,0:11:6.52:0,7,91	0/0:39,0:20:12.33:0,12,112	0/0:10,0:10:24:0,24,215	0/0:16,0:16:42:0,42,379	0/0:6,0:6:12:0,12,110	0/0:30,0:30:41.89:0,42,384	0/0:13,0:13:12.12:0,12,110	0/0:13,0:13:20.98:0,21,188	0/0:18,1:19:29.97:0,30,268	0/0:11,0:11:20.95:0,21,184	0/0:8,0:8:8.95:0,9,77	0/0:15,0:15:20.69:0,21,191	0/0:20,0:20:45.86:0,46,406	0/0:10,0:10:11.88:0,12,110	0/0:17,0:17:20.84:0,21,182	0/0:11,0:11:17.14:0,17,163	0/1:7,1:8:12.76:13,0,144	0/0:16,0:16:29.87:0,30,274	0/0:3,0:3:6:0,6,55	0/0:3,0:3:6:0,6,55	0/0:9,0:8:11.98:0,12,101	0/0:6,0:6:18.01:0,18,164	0/0:17,0:17:45.01:0,45,412	0/0:23,0:23:47.34:0,47,422	0/0:20,0:20:9.98:0,10,97	0/0:13,0:13:23.94:0,24,200
chr10	545847	.	G	GA	7103.59	PASS	AB=0.744;AC=38;AF=0.679;AN=56;BaseQRankSum=-6.173;DP=730;FS=18.578;HRun=11;HaplotypeScore=101.0036;InbreedingCoeff=0.4141;MQ=58.26;MQ0=4;MQRankSum=2.202;QD=12.64;ReadPosRankSum=0.914;VQSLOD=3.0708;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:9,31:41:31.26:667,31,0	1/1:4,8:11:3.82:220,4,0	0/0:22,1:16:35.09:0,35,241	0/1:10,0:9:6.24:6,0,55	1/1:16,25:39:53.17:658,53,0	1/1:14,12:27:26.55:422,27,0	1/1:4,8:13:18.34:168,18,0	0/0:24,0:25:53.56:0,54,369	0/0:31,0:30:18.57:0,19,309	0/0:41,0:38:70.30:0,70,517	0/0:27,0:26:50.81:0,51,366	1/1:10,6:15:18.04:184,18,0	1/1:17,9:26:23.71:200,24,0	1/1:15,5:17:4.03:188,4,0	1/1:16,17:28:26.36:435,26,0	1/1:13,5:18:1.50:170,1,0	1/1:12,15:28:14.55:301,15,0	0/0:14,0:15:5.56:0,6,164	0/1:10,16:26:8.01:374,0,8	1/1:12,28:40:11.18:619,11,0	1/1:3,9:12:0.81:190,1,0	1/1:7,13:20:3.57:216,4,0	0/1:23,13:34:24.80:354,0,25	0/1:14,4:17:62.10:115,0,62	1/1:10,18:26:27.66:446,28,0	0/1:20,21:40:32.83:551,0,33	0/1:18,24:41:1.36:493,0,1	1/1:4,5:9:13.27:125,13,0
chr10	549098	.	AAAAGAAAGAAAGAAAGAAAGAAAGAAAG	A	2215.66	PASS	AB=1.000;AC=7;AF=0.140;AN=50;BaseQRankSum=1.444;DP=483;FS=0.770;HRun=0;HaplotypeScore=257.6726;InbreedingCoeff=0.4477;MQ=49.72;MQ0=36;MQRankSum=-5.380;QD=26.38;ReadPosRankSum=0.876;VQSLOD=2.2663;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:21,0:20:89.54:501,0,90	0/0:11,0:10:15.05:0,15,805	./.	./.	0/0:16,0:16:30.06:0,30,1518	0/0:20,0:20:33.11:0,33,1654	0/0:16,0:15:20.94:0,21,603	0/0:16,0:11:6.01:0,6,132	0/0:16,0:12:24.08:0,24,1203	0/0:8,0:15:36.12:0,36,1536	0/0:17,0:16:27.09:0,27,1106	0/0:17,0:16:15.05:0,15,616	0/0:18,0:18:24.07:0,24,942	0/0:9,0:7:12.04:0,12,343	0/0:17,0:17:42.14:0,42,1702	0/0:11,0:11:24.08:0,24,1068	0/1:15,0:13:28.99:485,0,29	0/0:22,0:14:21.07:0,21,866	0/0:14,0:10:15.02:0,15,525	0/0:13,0:13:24.08:0,24,897	0/0:22,0:19:36.12:0,36,1474	0/0:18,0:18:30.10:0,30,1656	0/0:23,0:23:39.10:0,39,1572	0/1:20,0:18:35.87:36,0,1540	0/0:13,0:10:9.03:0,9,297	1/1:7,10:17:26.65:656,27,0	1/1:10,0:10:18.04:675,18,0	./.
chr10	549124	.	AAG	A	188.60	PASS	AB=0.878;AC=4;AF=0.077;AN=52;BaseQRankSum=4.462;DP=470;FS=0.000;HRun=0;HaplotypeScore=62.5565;InbreedingCoeff=-0.0933;MQ=39.63;MQ0=98;MQRankSum=-3.213;QD=2.51;ReadPosRankSum=-3.543;VQSLOD=0.7194;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:18,8:20:91.02:91,0,254	0/0:7,0:6:18.06:0,18,307	0/0:5,0:1:3.01:0,3,37	./.	0/0:16,0:14:36.12:0,36,582	0/0:18,0:15:39.13:0,39,596	0/0:17,0:16:42.14:0,42,615	0/0:10,0:5:14.93:0,15,164	0/0:19,0:13:36.11:0,36,569	0/0:24,0:19:56.37:0,56,586	0/0:22,0:17:29.63:0,30,256	0/0:11,0:10:20.77:0,21,204	0/0:15,0:13:32.70:0,33,314	0/0:18,0:9:26.84:0,27,290	0/0:27,0:17:47.52:0,48,508	0/0:14,0:10:26.35:0,26,217	0/1:25,1:15:29.95:30,0,240	0/0:23,0:13:26.72:0,27,257	0/0:21,0:7:20.90:0,21,263	0/0:16,0:13:38.93:0,39,460	0/0:22,0:15:41.51:0,42,357	0/0:24,0:15:45.14:0,45,724	0/0:16,0:15:45.15:0,45,723	0/0:29,0:18:40.29:0,40,683	0/0:13,0:7:12.79:0,13,104	0/1:12,0:11:99:156,0,178	0/1:8,3:10:19.11:19,0,166	./.
chr10	549550	.	AT	A	1292.83	PASS	AC=12;AF=0.222;AN=54;BaseQRankSum=7.656;DP=245;FS=6.863;HRun=9;HaplotypeScore=22.3250;InbreedingCoeff=0.9104;MQ=63.00;MQ0=0;MQRankSum=1.344;QD=19.59;ReadPosRankSum=3.604;VQSLOD=2.7058;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,17:17:45.02:412,45,0	0/0:6,0:6:18.05:0,18,208	0/0:6,0:5:8.97:0,9,84	./.	0/0:18,0:18:51.08:0,51,562	0/0:7,0:7:18.03:0,18,189	0/0:5,0:5:12.02:0,12,128	0/0:27,0:27:69.15:0,69,754	1/1:1,8:9:18.01:165,18,0	0/0:12,0:12:33.09:0,33,373	0/0:10,0:10:21:0,21,226	0/0:6,0:6:18.04:0,18,197	0/0:5,0:5:12.04:0,12,138	0/0:9,0:9:27.05:0,27,298	0/0:5,0:5:15.04:0,15,173	0/0:10,0:10:30.08:0,30,338	1/1:0,9:9:27.01:247,27,0	0/0:9,0:9:27.08:0,27,311	0/0:9,0:10:11.87:0,12,118	0/0:9,0:9:27.07:0,27,302	0/0:4,0:4:9.03:0,9,104	0/0:3,0:3:9.01:0,9,94	0/0:7,0:7:15.04:0,15,173	0/0:2,0:2:6.02:0,6,69	0/0:8,0:8:24.07:0,24,277	1/1:0,7:7:20.99:185,21,0	1/1:0,11:11:30.02:275,30,0	1/1:0,13:13:21.01:192,21,0
chr10	552690	.	T	TG	271.91	PASS	AB=0.792;AC=4;AF=0.071;AN=56;BaseQRankSum=0.327;DP=508;FS=8.341;HRun=0;HaplotypeScore=81.9975;InbreedingCoeff=-0.0823;MQ=54.51;MQ0=26;MQRankSum=0.573;QD=2.92;ReadPosRankSum=1.667;VQSLOD=2.0330;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:9,11:18:52.67:147,0,53	0/0:11,0:11:32.94:0,33,286	0/0:25,0:8:4.47:0,4,36	0/0:43,0:10:9.28:0,9,86	0/0:25,0:25:63.51:0,64,489	0/0:11,0:10:24.01:0,24,231	0/0:6,0:6:17.61:0,18,157	0/0:26,0:25:37.73:0,38,379	0/1:13,2:14:51.65:52,0,207	0/0:23,0:22:53.62:0,54,435	0/0:20,0:19:50.30:0,50,468	0/0:12,0:11:29.90:0,30,255	0/0:8,0:7:14.94:0,15,126	0/0:11,0:10:29.93:0,30,264	0/0:12,0:11:27.20:0,27,228	0/0:12,0:12:30.57:0,31,305	0/1:20,9:28:87.41:172,0,87	0/0:20,0:20:46.75:0,47,426	0/0:24,0:24:71.83:0,72,678	0/0:20,0:19:55.16:0,55,479	0/0:8,0:8:13.02:0,13,105	0/0:16,0:15:38.27:0,38,345	0/0:15,0:15:35.74:0,36,286	0/0:11,0:11:21.93:0,22,236	0/0:26,0:25:35.76:0,36,267	0/0:16,1:17:11.45:0,11,213	0/1:25,4:27:3.69:4,0,298	0/0:13,0:10:17.84:0,18,127
chr10	555041	.	AGACCC	A	1225.74	PASS	AB=0.905;AC=25;AF=0.463;AN=54;BaseQRankSum=-4.189;DP=415;FS=1.020;HRun=0;HaplotypeScore=93.9775;InbreedingCoeff=-0.5317;MQ=35.42;MQ0=11;MQRankSum=0.715;QD=3.45;ReadPosRankSum=-3.399;VQSLOD=0.9382;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:30,1:29:92.68:93,0,205	0/1:7,0:7:1.11:1,0,55	0/0:24,0:3:5.99:0,6,84	0/1:39,0:10:6.91:7,0,109	0/1:25,2:27:99:204,0,121	0/1:10,0:10:47.87:48,0,68	0/1:12,0:12:55.19:97,0,55	1/1:1,4:5:11.77:116,12,0	./.	0/1:21,0:21:1.65:2,0,269	0/1:16,1:18:99:115,0,149	0/1:7,1:9:0.67:1,0,82	0/0:7,0:8:10.15:0,10,84	0/1:8,0:9:36.80:37,0,90	0/1:9,0:9:10.70:31,0,11	0/1:6,0:13:24.30:24,0,91	0/1:15,1:14:73.61:74,0,133	0/1:6,0:5:19.56:35,0,20	0/1:13,1:18:99:154,0,104	0/1:16,0:16:8.63:9,0,141	0/1:7,3:10:20:104,0,20	0/0:4,0:4:11.04:0,11,73	0/1:14,0:14:66.25:66,0,116	1/1:9,0:7:5.50:40,6,0	0/1:17,0:20:22.38:22,0,218	0/0:20,0:21:0.10:0,0,284	0/1:20,0:23:39.15:39,0,207	0/1:5,0:5:54.87:55,0,66
chr10	557365	.	CGTGT	C	668.93	PASS	AB=0.902;AC=12;AF=0.231;AN=52;BaseQRankSum=2.775;DP=784;FS=0.000;HRun=0;HaplotypeScore=146.6583;InbreedingCoeff=0.2302;MQ=56.57;MQ0=14;MQRankSum=-1.600;QD=2.63;ReadPosRankSum=-0.962;VQSLOD=2.5035;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:37,0:41:43.30:43,0,93	0/0:10,0:12:8.73:0,9,60	./.	./.	0/0:16,0:18:17.75:0,18,205	0/0:24,0:24:24.08:0,24,487	0/1:32,0:33:1.51:2,0,498	0/0:30,0:29:8.96:0,9,84	0/0:28,0:28:3.17:0,3,469	0/0:39,0:37:14.66:0,15,643	0/0:14,0:14:15.02:0,15,238	0/0:29,0:33:45.06:0,45,779	0/1:17,1:20:25.46:25,0,338	0/1:23,2:26:57.30:57,0,446	0/0:25,0:28:17.78:0,18,299	0/0:23,0:23:29.95:0,30,557	1/1:28,15:42:2.36:215,2,0	0/1:26,1:30:6.87:7,0,573	0/0:33,0:30:17.99:0,18,355	0/0:13,0:13:9.02:0,9,166	0/0:64,0:66:44.95:0,45,1253	0/0:18,0:21:26.83:0,27,462	0/0:18,0:21:14.52:0,15,195	0/0:41,0:44:71.68:0,72,1297	0/0:18,0:20:44.54:0,45,767	0/1:19,4:23:40.44:120,0,40	1/1:17,11:26:10.50:269,10,0	1/1:6,1:6:5.14:73,5,0
chr10	559524	.	GCA	G	541.07	PASS	AB=0.910;AC=14;AF=0.269;AN=52;BaseQRankSum=4.588;DP=611;FS=0.687;HRun=0;HaplotypeScore=85.7624;InbreedingCoeff=0.1193;MQ=57.62;MQ0=19;MQRankSum=0.740;QD=2.11;ReadPosRankSum=1.175;VQSLOD=1.7614;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:36:4.85:22,5,0	0/1:9,1:10:17.75:18,0,131	./.	./.	0/1:19,1:24:40.47:40,0,201	0/1:20,1:22:45.68:46,0,279	0/1:18,2:20:35.18:35,0,305	0/0:30,0:29:26.78:0,27,240	1/1:9,6:18:23.56:205,24,0	0/0:22,0:22:26.74:0,27,312	0/0:23,0:22:30.06:0,30,402	0/0:20,0:20:27.05:0,27,358	0/0:14,0:14:14.92:0,15,171	0/0:19,0:20:36.07:0,36,472	0/0:20,0:20:21.03:0,21,290	0/0:15,0:15:24.35:0,24,321	1/1:17,0:20:14.36:80,14,0	0/0:23,2:25:3.26:0,3,366	0/0:15,0:15:11.86:0,12,129	0/1:22,3:25:55.75:56,0,420	0/0:27,0:27:26.35:0,26,264	0/1:21,2:22:55.07:55,0,215	0/1:22,1:23:29.63:30,0,321	0/1:29,6:35:99:114,0,396	0/0:21,2:23:3.49:0,3,450	0/0:8,0:17:26.32:0,26,192	0/0:12,0:11:8.48:0,8,78	0/0:10,0:13:7.41:0,7,42
chr10	561301	.	TCTC	T	2162.85	PASS	AB=0.593;AC=5;AF=0.089;AN=56;BaseQRankSum=10.720;DP=770;FS=1.746;HRun=0;HaplotypeScore=129.3947;InbreedingCoeff=0.8651;MQ=78.67;MQ0=0;MQRankSum=-4.197;QD=28.09;ReadPosRankSum=0.526;VQSLOD=3.6125;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,105,2104	0/0:19,0:19:45.15:0,45,942	0/0:23,0:22:54.98:0,55,870	0/0:33,0:33:58.10:0,58,1149	0/0:24,0:24:69.24:0,69,1444	0/0:24,0:24:69.24:0,69,1426	0/0:25,0:25:69.24:0,69,1445	0/0:27,0:27:48.16:0,48,1006	0/0:24,0:24:60.16:0,60,1214	0/0:24,0:24:60.21:0,60,1253	0/0:25,0:25:63.18:0,63,1205	0/0:34,0:34:90.31:0,90,1876	0/0:32,0:32:81.28:0,81,1645	0/0:32,0:32:78.25:0,78,1574	0/0:35,0:35:90.31:0,90,1867	0/0:25,0:25:60.21:0,60,1257	0/0:35,0:35:84.29:0,84,1757	0/0:23,0:23:63.22:0,63,1318	0/0:18,0:18:39.13:0,39,815	0/0:23,0:23:51.15:0,51,1032	0/0:35,0:35:96.33:0,96,1988	0/0:37,0:37:93.32:0,93,1943	0/0:22,0:22:66.23:0,66,1380	0/0:24,0:24:66.23:0,66,1383	0/0:25,0:25:69.23:0,69,1408	0/1:10,22:32:2.69:792,0,3	1/1:6,27:33:75.22:1097,75,0	1/1:3,9:11:27.09:403,27,0
chr10	561397	.	TTTTTC	T	1558.64	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.528;DP=688;FS=0.000;HRun=0;HaplotypeScore=142.3312;InbreedingCoeff=0.9697;MQ=84.06;MQ0=0;MQRankSum=-9.873;QD=31.17;ReadPosRankSum=-1.544;VQSLOD=2.9717;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,108,3344	0/0:12,0:12:36.12:0,36,1165	0/0:31,0:31:93.32:0,93,2716	0/0:27,0:27:63.22:0,63,1885	0/0:29,0:29:87.30:0,87,2805	0/0:21,0:21:60.21:0,60,1911	0/0:28,0:28:81.28:0,81,2411	1/1:13,16:29:51.15:823,51,0	1/1:3,18:21:54.18:858,54,0	0/0:27,0:27:78.27:0,78,2489	0/0:22,0:22:66.23:0,66,2124	0/0:24,0:24:72.25:0,72,2278	0/0:20,0:20:57.20:0,57,1769	0/0:32,0:32:96.33:0,96,3041	0/0:27,0:27:78.27:0,78,2520	0/0:24,1:25:23.95:0,24,2107	0/0:29,0:29:84.29:0,84,2634	0/0:22,0:22:63.22:0,63,2018	0/0:18,0:18:51.16:0,51,1507	0/0:22,0:22:63.22:0,63,2002	0/0:39,0:39:99:0,114,3516	0/0:28,0:28:84.29:0,84,2685	0/0:24,0:24:72.25:0,72,2326	0/0:23,0:23:66.23:0,66,2033	0/0:19,0:19:54.19:0,54,1745	0/0:26,0:26:78.25:0,78,2328	0/0:24,0:24:69.24:0,69,2229	0/0:3,0:3:9.03:0,9,291
chr10	561404	.	AAGACTAT	A	2181.09	PASS	AB=0.952;AC=5;AF=0.089;AN=56;BaseQRankSum=10.069;DP=656;FS=1.363;HRun=0;HaplotypeScore=161.5879;InbreedingCoeff=0.8072;MQ=80.82;MQ0=0;MQRankSum=-10.090;QD=40.39;ReadPosRankSum=-1.259;VQSLOD=3.2227;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,102,4257	0/0:12,0:12:36.12:0,36,1489	0/0:31,0:31:88.57:0,89,3628	0/0:23,0:23:69.23:0,69,2520	0/0:29,0:29:87.30:0,87,3626	0/0:19,0:19:57.20:0,57,2267	0/0:23,0:23:69.22:0,69,2794	1/1:0,16:16:48.16:1101,48,0	1/1:0,18:18:54.19:1200,54,0	0/0:26,0:26:78.27:0,78,3235	0/0:20,0:20:60.21:0,60,2507	0/0:25,0:25:72.24:0,72,2825	0/0:18,0:18:54.17:0,54,2163	0/0:33,0:33:99:0,99,3974	0/0:29,0:29:87.30:0,87,3552	0/1:19,1:20:6.71:7,0,2333	0/0:30,0:30:90.31:0,90,3681	0/0:25,0:25:72.25:0,72,2955	0/0:17,0:17:51.18:0,51,2104	0/0:21,0:21:60.21:0,60,2408	0/0:36,0:36:99:0,108,4137	0/0:29,0:29:87.29:0,87,3528	0/0:25,0:25:75.26:0,75,3140	0/0:22,0:22:66.23:0,66,2737	0/0:21,0:21:60.21:0,60,2414	0/0:25,0:25:75.26:0,75,3055	0/0:24,0:24:72.25:0,72,2906	0/0:5,0:5:15.05:0,15,629
chr10	561411	.	T	TA	712	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=10.905;DP=669;FS=3.459;HRun=1;HaplotypeScore=88.1685;InbreedingCoeff=0.9918;MQ=80.58;MQ0=0;MQRankSum=-9.915;QD=14.83;ReadPosRankSum=-3.402;VQSLOD=2.2738;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:99:0,99,1384	0/0:11,0:11:33.11:0,33,462	0/0:35,0:35:88.20:0,88,1367	0/0:24,0:25:72.21:0,72,966	0/0:28,0:28:84.28:0,84,1174	0/0:16,0:16:48.16:0,48,671	0/0:24,0:24:72.23:0,72,990	1/1:23,4:27:71.61:540,72,0	1/1:21,0:21:57.36:294,57,0	0/0:26,0:26:78.26:0,78,1077	0/0:21,0:21:63.21:0,63,879	0/0:24,0:24:72.21:0,72,970	0/0:18,0:18:54.17:0,54,736	0/0:33,0:33:99:0,99,1383	0/0:29,0:29:87.29:0,87,1217	0/0:21,0:21:51.01:0,51,825	0/0:30,0:30:90.30:0,90,1256	0/0:27,0:27:75.25:0,75,1046	0/0:21,0:21:63.16:0,63,813	0/0:18,0:18:51.17:0,51,713	0/0:32,0:32:93.31:0,93,1298	0/0:28,0:28:84.28:0,84,1172	0/0:28,0:28:81.27:0,81,1132	0/0:23,0:23:69.22:0,69,947	0/0:20,0:20:57.19:0,57,797	0/0:22,0:22:66.21:0,66,907	0/0:23,0:23:66.22:0,66,922	0/0:5,0:5:15.05:0,15,209
chr10	562333	.	A	AAAACAAAAC	5204.89	PASS	AB=0.682;AC=10;AF=0.179;AN=56;BaseQRankSum=0.005;DP=678;FS=7.237;HRun=0;HaplotypeScore=170.8999;InbreedingCoeff=0.5582;MQ=60.80;MQ0=14;MQRankSum=-6.553;QD=24.10;ReadPosRankSum=0.226;VQSLOD=3.4808;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:7,28:43:24.91:921,25,0	0/0:15,0:15:44.97:0,45,824	0/0:46,0:15:29.04:0,29,354	0/0:30,0:14:29.49:0,29,364	0/0:23,0:23:14.30:0,14,802	0/0:20,0:20:60.15:0,60,1209	0/0:15,0:15:31.30:0,31,604	0/1:22,0:47:99:743,0,154	0/1:28,0:28:47.45:219,0,47	0/0:29,0:30:81.19:0,81,1244	0/0:22,0:22:57.02:0,57,1107	0/0:14,0:14:34.30:0,34,604	0/0:27,0:27:39.52:0,40,831	0/0:13,0:13:32.63:0,33,609	0/0:20,0:20:57.11:0,57,993	0/0:17,0:17:39.12:0,39,719	0/1:3,2:21:1.79:393,0,2	0/0:13,0:13:35.44:0,35,632	0/0:20,0:20:53.88:0,54,773	0/0:27,0:27:61.73:0,62,1092	0/0:26,0:26:70.12:0,70,1202	0/0:26,0:26:60.12:0,60,976	0/0:17,0:17:45.01:0,45,694	0/0:21,0:21:49.79:0,50,882	0/0:20,0:20:56.90:0,57,870	0/1:11,3:31:8.72:1740,0,9	1/1:4,14:26:29.07:924,29,0	1/1:0,14:16:6.02:265,6,0
chr10	563774	.	CAT	C	1530.61	PASS	AB=0.889;AC=8;AF=0.143;AN=56;BaseQRankSum=4.177;DP=600;FS=1.900;HRun=0;HaplotypeScore=80.0063;InbreedingCoeff=0.1219;MQ=73.54;MQ0=14;MQRankSum=-1.587;QD=10.63;ReadPosRankSum=-0.106;VQSLOD=3.4508;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:30,2:31:33.07:306,0,33	0/0:9,0:9:12.12:0,12,228	0/0:32,0:23:66.11:0,66,698	0/0:31,0:24:71.79:0,72,701	0/0:16,0:16:41.99:0,42,469	0/0:26,0:26:28.14:0,28,630	0/0:31,0:31:56.34:0,56,922	1/1:15,0:14:30.49:261,30,0	0/1:5,12:17:47.71:76,0,48	0/0:22,0:21:56.62:0,57,831	0/0:17,0:16:36.13:0,36,549	0/0:15,0:15:7.96:0,8,348	0/0:13,0:13:27.12:0,27,380	0/0:25,0:25:52.93:0,53,679	0/0:16,0:16:27.90:0,28,443	0/0:28,0:28:46.40:0,46,846	0/1:25,5:29:75.57:380,0,76	0/0:15,0:14:7.46:0,7,279	0/0:17,0:17:44.63:0,45,396	0/0:24,0:24:41.24:0,41,582	0/0:51,0:50:99:0,100,1292	0/0:19,0:19:44.41:0,44,529	0/0:13,0:13:18.41:0,18,290	0/0:25,0:25:34.12:0,34,759	0/0:11,0:11:27.08:0,27,456	0/1:18,1:19:19.77:286,0,20	0/1:21,0:21:44.31:243,0,44	0/1:10,0:10:11.68:121,0,12
chr10	565606	.	TAC	T	1813.28	PASS	AB=0.904;AC=17;AF=0.304;AN=56;BaseQRankSum=4.569;DP=589;FS=0.559;HRun=0;HaplotypeScore=81.3884;InbreedingCoeff=0.4038;MQ=70.91;MQ0=23;MQRankSum=2.194;QD=6.95;ReadPosRankSum=0.205;VQSLOD=2.6594;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:36,0:35:5.22:475,5,0	0/1:12,0:12:20.68:21,0,202	0/0:34,0:20:20.69:0,21,209	0/0:46,0:28:21.42:0,21,243	0/0:22,0:22:33.09:0,33,474	0/0:17,3:19:23.74:0,24,316	0/0:26,0:25:8.32:0,8,526	0/1:17,0:28:0.74:50,0,1	1/1:18,0:18:14.98:59,15,0	0/1:28,0:27:10.60:11,0,390	0/0:10,0:10:20.26:0,20,237	0/0:15,0:15:29.31:0,29,402	0/0:8,0:8:6.45:0,6,91	0/0:13,0:12:17.79:0,18,215	0/1:16,0:15:13.72:14,0,379	0/1:10,0:9:10.64:11,0,123	1/1:29,0:28:47.73:550,48,0	0/0:12,0:11:11.89:0,12,141	0/0:22,0:22:26.32:0,26,362	0/0:17,0:17:23.48:0,23,339	0/1:39,0:38:99:136,0,476	0/0:15,0:15:24.01:0,24,329	0/0:28,0:27:30.23:0,30,435	0/0:29,0:29:14.54:0,15,623	0/0:11,0:11:26.98:0,27,344	0/1:7,12:19:14.66:250,0,15	1/1:12,0:12:9.02:104,9,0	1/1:14,0:12:27.08:314,27,0
chr10	567775	.	TACAC	T	368.89	PASS	AB=0.935;AC=10;AF=0.200;AN=50;BaseQRankSum=4.696;DP=554;FS=17.145;HRun=0;HaplotypeScore=92.3193;InbreedingCoeff=0.3218;MQ=53.39;MQ0=23;MQRankSum=-0.750;QD=2.82;ReadPosRankSum=-1.459;VQSLOD=0.4742;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:25:14.88:0,15,222	0/0:7,0:6:11.93:0,12,227	./.	./.	0/0:21,0:20:15.03:0,15,267	1/1:24,5:28:12.03:165,12,0	1/1:24,4:28:6.57:183,7,0	./.	0/1:16,0:16:15.59:25,0,16	0/0:19,0:19:23.49:0,23,288	0/0:9,0:11:11.51:0,12,165	0/0:22,0:23:17.53:0,18,289	0/1:19,1:19:22.12:22,0,346	0/0:12,0:12:2.99:0,3,24	0/0:17,0:18:17.73:0,18,295	0/0:18,0:17:18.06:0,18,355	0/0:30,0:30:0.07:0,0,593	0/0:26,0:28:36.72:0,37,610	0/0:22,0:18:12.04:0,12,230	0/0:12,0:12:12.91:0,13,209	0/0:30,0:29:35.46:0,35,479	0/0:12,0:12:15.03:0,15,234	0/0:7,0:7:9.03:0,9,164	0/0:40,0:39:36.88:0,37,914	0/0:15,0:15:26.80:0,27,453	0/1:13,0:16:10:22,0,10	0/1:17,0:18:34.60:63,0,35	1/1:2,0:3:3:28,3,0
chr10	568235	.	A	ATGG	3657.61	PASS	AB=0.761;AC=12;AF=0.214;AN=56;BaseQRankSum=11.325;DP=636;FS=8.152;HRun=0;HaplotypeScore=143.7603;InbreedingCoeff=0.7859;MQ=55.73;MQ0=3;MQRankSum=-7.969;QD=17.58;ReadPosRankSum=-1.538;VQSLOD=2.9091;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:23,5:28:36.62:417,37,0	0/0:12,0:12:30.06:0,30,385	0/0:29,0:17:26.31:0,26,391	0/0:25,0:22:36.04:0,36,441	0/0:26,0:26:51.13:0,51,723	0/0:24,0:24:54.17:0,54,779	0/0:23,0:23:57.14:0,57,777	1/1:46,6:50:26.91:716,27,0	1/1:9,9:18:33.01:487,33,0	0/0:25,0:25:66.22:0,66,958	0/0:20,0:20:45.07:0,45,566	0/0:18,0:18:41.97:0,42,591	0/0:20,0:20:45.12:0,45,627	0/0:11,0:11:30.07:0,30,397	0/0:22,0:21:57.11:0,57,751	0/0:24,0:24:45.14:0,45,647	1/1:19,4:23:26.77:285,27,0	0/0:11,0:11:18.02:0,18,248	0/0:29,0:28:59.17:0,59,631	0/0:20,0:20:44.99:0,45,555	0/0:18,0:18:39.13:0,39,575	0/0:13,0:13:33.11:0,33,480	0/0:15,0:15:36.11:0,36,504	0/0:23,0:23:53.74:0,54,703	0/0:20,0:20:51.14:0,51,688	0/1:29,11:40:99:788,0,190	0/1:27,15:42:11.66:736,0,12	1/1:2,3:5:12.04:229,12,0
chr10	568262	.	CT	C	2485.98	PASS	AB=0.940;AC=16;AF=0.286;AN=56;BaseQRankSum=12.749;DP=570;FS=10.645;HRun=12;HaplotypeScore=89.1767;InbreedingCoeff=0.7624;MQ=67.09;MQ0=2;MQRankSum=-4.095;QD=12.75;ReadPosRankSum=0.003;VQSLOD=2.6347;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,16:21:41.63:313,42,0	0/0:9,0:9:21.04:0,21,213	0/0:24,0:12:5.31:0,5,74	0/0:15,0:11:10.04:0,10,55	0/0:23,1:25:45.83:0,46,613	0/0:20,0:21:46.92:0,47,431	0/1:19,3:22:10.39:10,0,262	1/1:6,26:32:77.43:574,77,0	1/1:7,12:21:42.51:285,43,0	0/0:23,3:26:20.97:0,21,464	0/0:16,1:17:24.02:0,24,390	0/0:20,0:20:46:0,46,468	0/0:20,0:20:44.92:0,45,411	0/0:16,1:17:24.80:0,25,410	0/0:20,0:19:56.84:0,57,537	0/0:26,1:27:49.61:0,50,631	1/1:1,15:18:40.46:294,40,0	0/0:13,0:13:11.05:0,11,247	0/0:29,1:31:48.34:0,48,615	0/0:25,1:26:37.56:0,38,512	0/0:9,0:9:18:0,18,172	0/1:12,0:12:12.32:12,0,143	0/0:13,1:14:12.16:0,12,263	0/0:23,0:23:38.82:0,39,514	0/0:16,2:18:1.12:0,1,326	1/1:3,18:22:56.48:423,56,0	1/1:6,28:39:88.01:621,88,0	1/1:1,7:8:20.61:150,21,0
chr10	568695	.	CA	C	5079.27	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=13.066;DP=698;FS=0.692;HRun=5;HaplotypeScore=64.6782;InbreedingCoeff=0.9970;MQ=89.29;MQ0=0;MQRankSum=-6.186;QD=30.60;ReadPosRankSum=0.869;VQSLOD=5.4316;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,30:32:81.23:919,81,0	0/0:21,0:21:63.19:0,63,831	0/0:26,0:26:59.66:0,60,760	0/0:25,0:25:69.19:0,69,864	0/0:38,0:38:99:0,114,1508	0/0:28,0:28:84.28:0,84,1149	0/0:26,0:26:78.19:0,78,1011	1/1:5,24:29:69.18:773,69,0	1/1:1,22:23:66.19:749,66,0	0/0:28,0:28:81.27:0,81,1100	0/0:24,0:24:69.23:0,69,943	0/0:21,0:21:60.19:0,60,804	0/0:22,0:22:60.17:0,60,789	0/0:27,0:27:81.27:0,81,1108	0/0:27,0:27:78.26:0,78,1067	0/0:29,1:30:50.24:0,50,1074	1/1:0,25:25:75.21:851,75,0	0/0:25,0:25:72.24:0,72,985	0/0:19,0:19:51.15:0,51,669	0/0:27,0:27:78.26:0,78,1062	0/0:29,0:29:84.28:0,84,1142	0/0:28,0:28:84.27:0,84,1133	0/0:10,0:10:30.10:0,30,410	0/0:29,0:29:87.29:0,87,1189	0/0:22,0:22:66.22:0,66,903	1/1:1,28:29:46.18:903,46,0	1/1:1,21:22:63.18:715,63,0	1/1:0,6:6:15.04:170,15,0
chr10	570761	.	GATAAGAGC	G	952	PASS	AC=8;AF=0.148;AN=54;BaseQRankSum=6.328;DP=697;FS=9.276;HRun=0;HaplotypeScore=170.8208;InbreedingCoeff=0.8530;MQ=71.03;MQ0=1;MQRankSum=-6.305;QD=14.21;ReadPosRankSum=2.081;VQSLOD=2.1474;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:9,0:9:12.04:0,12,495	0/0:33,0:29:15.05:0,15,427	0/0:38,0:36:1.06:0,1,412	0/0:26,0:26:63.22:0,63,2446	0/0:33,0:32:60.21:0,60,2279	0/0:21,0:21:39.10:0,39,1293	0/0:37,0:37:39.13:0,39,1072	0/0:11,0:20:18.06:0,18,482	0/0:38,0:38:84.29:0,84,3309	0/0:24,0:24:48.13:0,48,1770	0/0:23,0:23:42.14:0,42,1646	0/0:26,0:26:48.15:0,48,1750	0/0:23,0:23:45.12:0,45,1644	0/0:30,0:30:57.20:0,57,2172	0/0:31,0:31:60.19:0,60,2251	1/1:9,6:15:6.02:151,6,0	0/0:16,0:16:30.10:0,30,1153	0/0:14,0:14:18.06:0,18,742	0/0:24,0:24:48.13:0,48,1719	0/0:48,0:48:99:0,108,3992	0/0:23,0:23:39.13:0,39,1357	0/0:18,0:18:21.07:0,21,847	0/0:28,0:28:48.08:0,48,1815	0/0:19,0:19:36.06:0,36,1378	1/1:18,5:23:15.05:378,15,0	1/1:11,10:20:18.06:414,18,0	1/1:3,5:8:6.02:151,6,0
chr10	576353	.	AT	A	1196.51	PASS	AB=0.935;AC=13;AF=0.232;AN=56;BaseQRankSum=11.586;DP=571;FS=10.626;HRun=11;HaplotypeScore=64.1677;InbreedingCoeff=0.7557;MQ=72.11;MQ0=1;MQRankSum=-2.139;QD=7.48;ReadPosRankSum=1.369;VQSLOD=1.0690;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:66.17:0,66,703	0/0:9,0:9:27.06:0,27,281	0/0:34,0:25:21.43:0,21,380	0/0:10,0:9:17.88:0,18,150	0/0:18,0:18:11.32:0,11,302	0/0:23,0:23:60.12:0,60,624	0/0:21,2:23:10.80:0,11,497	1/1:8,24:33:44.92:561,45,0	1/1:2,21:23:59.93:493,60,0	0/0:24,0:24:60.15:0,60,633	0/0:22,0:22:50.96:0,51,504	0/0:23,0:23:63.09:0,63,631	0/0:20,0:20:54.11:0,54,566	0/0:19,1:20:32.45:0,32,526	0/0:21,1:22:29.49:0,29,519	0/1:16,2:18:1.19:1,0,391	0/0:26,1:27:50.48:0,50,710	0/0:22,2:24:19.87:0,20,615	0/0:16,0:16:8.80:0,9,289	0/0:17,1:18:29.52:0,30,511	0/0:16,0:16:39.07:0,39,405	0/1:7,0:7:9.61:10,0,99	0/0:12,0:12:26.94:0,27,271	0/0:19,1:20:35.51:0,36,583	0/1:16,2:19:1.34:1,0,377	1/1:3,0:24:43.47:130,43,0	1/1:1,0:21:34.63:100,35,0	1/1:1,0:14:26.48:77,26,0
chr10	577876	.	A	ATGG	1967.48	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-7.892;DP=679;FS=3.341;HRun=0;HaplotypeScore=93.5123;InbreedingCoeff=0.9932;MQ=73.32;MQ0=0;MQRankSum=-2.162;QD=28.93;ReadPosRankSum=2.065;VQSLOD=3.8506;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:21,19:41:45.10:1006,45,0	0/0:16,0:16:33.11:0,33,463	0/0:24,0:23:27.07:0,27,351	0/0:24,0:24:51.13:0,51,682	0/0:28,0:28:39.12:0,39,532	0/0:23,0:23:51.15:0,51,701	0/0:21,0:21:45.15:0,45,633	0/0:25,0:25:39.12:0,39,520	0/0:17,0:17:33.11:0,33,465	0/0:18,0:18:33.10:0,33,449	0/0:19,0:19:33.11:0,33,466	0/0:32,0:32:60.20:0,60,844	0/0:23,0:23:60.18:0,60,828	0/0:20,0:20:33.10:0,33,448	0/0:29,0:29:63.14:0,63,832	0/0:30,0:30:60.17:0,60,808	1/1:7,20:27:54.19:1083,54,0	0/0:18,0:18:27.05:0,27,380	0/0:37,0:37:45.14:0,45,619	0/0:20,0:20:27.09:0,27,381	0/0:27,0:27:41.80:0,42,568	0/0:20,0:20:33.11:0,33,465	0/0:25,0:25:36.09:0,36,470	0/0:34,0:34:42.55:0,43,860	0/0:11,0:11:18.06:0,18,254	0/0:30,0:30:45.15:0,45,635	0/0:25,0:25:48.16:0,48,674	0/0:15,0:15:36.12:0,36,508
chr10	580232	.	GA	G	1814.95	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.172;DP=600;FS=15.461;HRun=2;HaplotypeScore=57.2930;InbreedingCoeff=0.9965;MQ=65.45;MQ0=1;MQRankSum=0.388;QD=33.00;ReadPosRankSum=-1.481;VQSLOD=1.6053;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,132,1906	0/0:9,0:9:21.07:0,21,315	0/0:17,0:16:45.12:0,45,571	0/0:25,0:22:55.79:0,56,673	0/0:19,0:19:51.14:0,51,696	0/0:15,0:15:45.13:0,45,646	0/0:21,0:21:63.18:0,63,897	1/1:3,33:35:99:1197,99,0	1/1:0,19:19:57.19:740,57,0	0/0:21,0:21:63.17:0,63,885	0/0:18,0:18:48.16:0,48,717	0/0:24,0:24:72.24:0,72,1069	0/0:17,0:17:51.14:0,51,714	0/0:21,0:21:60.19:0,60,881	0/0:24,0:24:69.23:0,69,1034	0/0:13,0:13:39.10:0,39,544	0/0:27,0:27:81.27:0,81,1206	0/0:26,0:26:72.10:0,72,959	0/0:20,0:19:54.17:0,54,773	0/0:33,0:33:96.28:0,96,1368	0/0:11,0:11:30.10:0,30,450	0/0:22,0:22:66.19:0,66,944	0/0:19,0:19:57.18:0,57,832	0/0:29,0:29:87.25:0,87,1243	0/0:14,0:14:42.13:0,42,600	0/0:23,0:23:69.21:0,69,997	0/0:25,0:24:75.24:0,75,1086	0/0:8,0:8:24.07:0,24,336
chr10	580611	.	A	AT	1750.06	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-9.437;DP=541;FS=0.503;HRun=9;HaplotypeScore=49.7180;InbreedingCoeff=0.9762;MQ=69.92;MQ0=0;MQRankSum=-0.460;QD=24.65;ReadPosRankSum=0.937;VQSLOD=4.2776;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:38.97:0,39,335	0/0:4,0:4:12:0,12,104	0/0:8,1:9:14.99:0,15,130	0/0:12,0:12:14.83:0,15,119	0/0:28,0:28:74.11:0,74,649	0/0:18,0:18:50.98:0,51,443	0/0:15,0:15:41.97:0,42,360	0/0:30,0:30:80.96:0,81,697	0/0:19,0:19:50.95:0,51,438	0/0:29,0:29:77.94:0,78,671	0/0:20,0:20:50.96:0,51,437	0/0:18,0:18:47.99:0,48,417	0/0:26,0:26:68.92:0,69,589	0/0:20,0:20:56.99:0,57,495	0/0:22,0:22:30.79:0,31,443	0/0:16,0:16:44.97:0,45,386	0/0:22,0:22:53.96:0,54,469	0/0:18,0:18:44.99:0,45,391	0/0:22,0:21:44.94:0,45,388	0/0:22,0:22:59.95:0,60,517	0/0:14,0:14:32.99:0,33,286	0/0:20,0:20:53.97:0,54,469	0/0:23,0:23:68.67:0,69,584	0/0:9,0:9:26.99:0,27,234	0/0:17,0:17:44.97:0,45,388	1/1:3,24:27:49.13:762,49,0	1/1:4,28:32:38.10:865,38,0	1/1:4,8:12:24.06:265,24,0
chr10	587189	.	ATGTTT	A	2497.50	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=10.090;DP=666;FS=12.520;HRun=0;HaplotypeScore=124.2936;InbreedingCoeff=0.9103;MQ=71.45;MQ0=3;MQRankSum=-4.702;QD=35.68;ReadPosRankSum=1.276;VQSLOD=2.9838;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:81.28:0,81,2298	0/0:10,0:10:24.05:0,24,563	0/0:22,0:16:1.54:0,2,551	0/0:30,0:24:9.70:0,10,723	0/0:37,0:37:84.27:0,84,2255	0/0:21,0:19:51.18:0,51,1458	0/0:16,0:16:36.12:0,36,1030	0/0:24,0:33:40.93:0,41,812	0/0:6,0:16:30.08:0,30,634	0/0:27,0:27:60.20:0,60,1673	0/0:33,0:33:72.11:0,72,1858	0/0:18,0:18:33.11:0,33,941	0/0:25,0:25:57.18:0,57,1525	0/0:26,0:26:54.17:0,54,1460	0/0:22,0:22:51.16:0,51,1355	0/0:27,0:27:57.19:0,57,1534	0/0:27,0:27:57.15:0,57,1612	0/0:26,0:26:66.18:0,66,1822	0/0:22,0:21:39.10:0,39,931	0/0:16,0:16:39.13:0,39,1072	0/0:12,0:12:30.10:0,30,853	0/0:21,0:21:45.15:0,45,1254	0/0:28,0:28:60.17:0,60,1542	0/0:21,0:21:52.06:0,52,1373	0/0:27,0:27:75.26:0,75,2146	1/1:11,18:29:54.17:953,54,0	1/1:5,22:27:53.87:1013,54,0	1/1:1,13:14:36.12:673,36,0
chr10	588968	.	G	GA	1201.78	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-7.902;DP=547;FS=0.000;HRun=8;HaplotypeScore=51.1549;InbreedingCoeff=0.9593;MQ=73.79;MQ0=0;MQRankSum=-0.004;QD=26.13;ReadPosRankSum=3.152;VQSLOD=4.1718;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,17:19:23.70:526,24,0	0/0:3,0:3:9:0,9,82	0/0:14,0:14:29.99:0,30,270	0/0:11,0:11:26.38:0,26,212	0/0:37,0:37:93.02:0,93,840	0/0:24,0:24:66.03:0,66,604	0/0:14,0:13:39:0,39,351	0/0:36,0:36:81.03:0,81,738	0/0:15,0:15:36:0,36,325	0/0:24,0:24:60.03:0,60,549	0/0:22,0:22:54.03:0,54,494	0/0:15,0:15:39.01:0,39,352	0/0:12,0:12:29.99:0,30,270	0/0:25,0:25:69.01:0,69,626	0/0:21,0:21:57.02:0,57,517	0/0:16,0:16:45.01:0,45,407	1/1:4,23:27:69.21:796,69,0	0/0:20,0:19:51.02:0,51,467	0/0:24,0:24:59.97:0,60,537	0/0:31,0:31:81.02:0,81,736	0/0:5,0:5:15.01:0,15,137	0/0:11,0:11:30.02:0,30,275	0/0:24,0:24:66.04:0,66,604	0/0:9,0:9:24.01:0,24,220	0/0:17,0:17:50.98:0,51,454	0/0:29,0:29:75.02:0,75,686	0/0:26,0:25:75.02:0,75,681	0/0:16,0:16:44.99:0,45,402
chr10	589832	.	CCCACCACCACCA	C	163.92	PASS	AB=0.775;AC=3;AF=0.063;AN=48;BaseQRankSum=4.062;DP=124;FS=12.561;HRun=0;HaplotypeScore=56.4472;InbreedingCoeff=-0.1486;MQ=76.06;MQ0=1;MQRankSum=-3.627;QD=7.81;ReadPosRankSum=2.940;VQSLOD=0.0198;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:11,3:14:50.36:50,0,1295	./.	0/0:9,0:5:12.04:0,12,715	0/0:17,0:13:18.93:0,19,311	0/0:4,0:4:9.03:0,9,360	0/0:2,0:2:3.01:0,3,182	0/0:6,0:6:12.93:0,13,358	0/0:7,0:6:15.05:0,15,663	0/0:2,0:2:6.02:0,6,155	0/0:2,0:2:6.02:0,6,301	./.	0/0:5,0:5:15.04:0,15,545	0/0:3,0:3:9.03:0,9,316	0/0:5,0:5:12.01:0,12,139	0/0:2,0:2:2.99:0,3,25	0/1:1,1:2:99:107,0,176	0/0:3,1:4:1.76:0,2,86	./.	0/1:4,1:4:99:101,0,344	0/0:1,0:1:3.01:0,3,61	0/0:9,0:7:21.07:0,21,810	0/0:4,0:4:6.02:0,6,345	0/0:4,0:4:9.03:0,9,440	0/0:7,0:4:12.04:0,12,397	0/0:1,0:1:3.01:0,3,107	0/0:2,0:2:6.02:0,6,364	0/0:5,0:5:12.04:0,12,358	./.
chr10	589853	.	CCGCCG	C	46.78	PASS	AB=0.771;AC=3;AF=0.063;AN=48;BaseQRankSum=3.368;DP=140;FS=14.190;HRun=0;HaplotypeScore=44.4154;InbreedingCoeff=-0.1335;MQ=71.25;MQ0=1;MQRankSum=-1.557;QD=2.03;ReadPosRankSum=2.067;VQSLOD=-0.6154;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:11,5:13:30.72:31,0,544	./.	0/0:12,0:9:27.09:0,27,765	0/0:16,0:14:15.36:0,15,384	0/0:4,0:4:3.01:0,3,96	0/0:3,0:3:9.03:0,9,276	0/0:9,1:10:24.08:0,24,716	0/0:8,0:8:24.07:0,24,615	0/0:2,0:2:6.02:0,6,145	0/0:3,0:3:9.03:0,9,289	0/0:2,0:2:3.01:0,3,65	0/0:4,0:4:9.03:0,9,287	0/0:2,0:2:6.02:0,6,177	0/0:4,0:4:9.03:0,9,273	./.	0/1:3,1:4:54.46:54,0,227	0/0:6,1:7:9.03:0,9,178	0/0:3,1:3:9.03:0,9,244	0/1:2,1:3:57.52:58,0,141	./.	0/0:5,2:5:12.04:0,12,385	0/0:5,0:5:12.04:0,12,385	0/0:2,0:2:3.01:0,3,96	0/0:10,3:10:30.05:0,30,777	0/0:2,0:2:6.02:0,6,145	0/0:5,0:5:15.05:0,15,476	0/0:2,0:2:6.02:0,6,138	./.
chr10	593332	.	AC	A	1003.34	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.120;DP=625;FS=6.117;HRun=2;HaplotypeScore=70.6684;InbreedingCoeff=0.9811;MQ=44.58;MQ0=14;MQRankSum=-0.293;QD=14.13;ReadPosRankSum=1.431;VQSLOD=2.9555;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,35:29:42.12:541,42,0	0/0:12,0:12:36.12:0,36,539	0/0:19,0:4:12.04:0,12,180	0/0:16,0:10:27.04:0,27,378	0/0:13,0:13:30.10:0,30,437	0/0:20,0:20:33.07:0,33,460	0/0:35,0:35:90.30:0,90,1346	0/0:27,0:27:75.25:0,75,1121	0/0:22,0:22:45.07:0,45,623	0/0:22,0:21:63.20:0,63,925	0/0:15,0:15:39.13:0,39,574	0/0:25,0:25:60.12:0,60,838	0/0:24,0:24:48.16:0,48,718	0/0:29,0:29:54.18:0,54,796	0/0:22,0:21:48.16:0,48,700	0/0:18,0:18:42.14:0,42,627	1/1:1,34:30:45.15:584,45,0	0/0:23,0:23:42.10:0,42,591	0/0:20,0:16:48.16:0,48,717	0/0:13,0:13:36.12:0,36,539	0/0:39,0:39:99:0,102,1522	0/0:10,0:10:21.07:0,21,314	0/0:16,0:16:45.15:0,45,665	0/0:33,0:33:66.22:0,66,980	0/0:19,0:19:42.14:0,42,629	0/0:26,0:26:78.25:0,78,1146	0/0:22,0:22:63.17:0,63,918	0/0:13,0:13:33.05:0,33,442
chr10	594677	.	TA	T	1146.78	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.103;DP=729;FS=5.126;HRun=6;HaplotypeScore=53.4163;InbreedingCoeff=0.8801;MQ=51.03;MQ0=36;MQRankSum=-7.877;QD=14.52;ReadPosRankSum=-2.685;VQSLOD=2.4141;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:34:72.23:0,72,947	0/0:10,0:10:23.87:0,24,296	0/0:8,0:3:2.66:0,3,56	0/0:8,0:1:3.01:0,3,39	0/0:33,0:30:63.19:0,63,814	0/0:32,0:29:69.22:0,69,908	0/0:18,0:14:18.06:0,18,237	0/0:34,0:15:39.03:0,39,459	0/0:21,0:19:42.12:0,42,537	0/0:38,0:36:96.31:0,96,1263	0/0:33,0:32:63.20:0,63,829	0/0:40,0:40:78.24:0,78,1014	0/0:29,0:29:69.01:0,69,907	0/0:17,0:17:36.07:0,36,454	0/0:27,0:26:42.14:0,42,553	0/0:27,0:26:57.16:0,57,722	0/0:24,0:23:48.16:0,48,632	0/0:22,0:21:33.11:0,33,432	0/0:32,0:21:57.19:0,57,750	0/0:37,0:33:75.12:0,75,902	0/0:20,0:17:27.09:0,27,355	0/0:20,0:17:39.13:0,39,513	0/0:31,0:29:60.19:0,60,781	0/0:28,0:28:48.13:0,48,603	0/0:23,0:23:51.16:0,51,659	1/1:6,23:22:48.12:516,48,0	1/1:8,28:20:35.99:386,36,0	1/1:0,14:12:36.09:387,36,0
chr10	595561	.	CTTTA	C	2611.91	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.828;DP=645;FS=9.916;HRun=0;HaplotypeScore=98.9196;InbreedingCoeff=0.9997;MQ=77.86;MQ0=0;MQRankSum=-1.449;QD=40.18;ReadPosRankSum=4.471;VQSLOD=3.7087;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,43:45:99:1894,102,0	0/0:11,0:11:33.11:0,33,870	0/0:27,0:21:60.21:0,60,1523	0/0:20,0:18:50.84:0,51,1201	0/0:33,0:33:99:0,99,2609	0/0:16,0:16:48.16:0,48,1280	0/0:24,0:24:69.22:0,69,1759	0/0:34,0:34:90.28:0,90,2224	0/0:18,0:18:51.18:0,51,1347	0/0:24,0:24:72.24:0,72,1857	0/0:15,0:15:42.14:0,42,1092	0/0:37,0:37:99:0,105,2678	0/0:23,0:23:66.23:0,66,1760	0/0:20,0:20:54.19:0,54,1409	0/0:28,0:28:81.25:0,81,2035	0/0:17,0:17:45.15:0,45,1200	1/1:0,20:20:45.15:840,45,0	0/0:28,0:27:78.27:0,78,2064	0/0:12,0:12:33.11:0,33,881	0/0:21,0:21:63.20:0,63,1620	0/0:22,0:22:60.19:0,60,1505	0/0:31,0:31:93.27:0,93,2327	0/0:14,0:14:42.12:0,42,1063	0/0:19,0:19:57.20:0,57,1521	0/0:16,0:16:45.14:0,45,1144	0/0:24,0:24:72.25:0,72,1869	0/0:28,0:28:81.28:0,81,2161	0/0:18,0:18:54.19:0,54,1440
chr10	598307	.	A	AGGG	1712.33	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=3.353;DP=503;FS=11.336;HRun=7;HaplotypeScore=69.0971;InbreedingCoeff=0.8642;MQ=66.53;MQ0=0;MQRankSum=-2.149;QD=29.02;ReadPosRankSum=-0.002;VQSLOD=0.6071;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,19:34:48.08:817,48,0	0/0:2,0:2:3:0,3,41	0/0:13,0:14:30.04:0,30,373	0/0:14,0:14:21.05:0,21,282	0/0:18,0:18:48.15:0,48,654	0/0:19,0:19:45.13:0,45,613	0/0:29,0:24:69.21:0,69,926	0/0:17,0:20:33.06:0,33,441	0/0:16,0:15:45.12:0,45,594	0/0:22,0:21:57.18:0,57,777	0/0:10,0:10:24.06:0,24,327	0/0:17,0:15:39.13:0,39,532	0/0:22,0:21:60.19:0,60,818	0/0:23,0:23:57.18:0,57,776	0/0:17,0:14:39.13:0,39,532	0/0:23,0:22:63.16:0,63,823	1/1:6,16:24:51.15:1016,51,0	0/0:22,0:21:57.15:0,57,758	0/0:15,0:15:36.10:0,36,491	0/0:10,0:10:27.09:0,27,368	0/0:39,0:39:87.24:0,87,1180	0/0:7,0:7:18.05:0,18,246	0/0:12,0:12:30.09:0,30,409	0/0:22,0:21:57.18:0,57,778	0/0:9,0:9:24.08:0,24,327	0/0:18,0:17:36.09:0,36,491	0/0:22,0:22:48.14:0,48,654	0/0:2,0:2:6.02:0,6,82
chr10	598554	.	GTTCCTGCTTCAA	G	293.27	PASS	AC=4;AF=0.083;AN=48;BaseQRankSum=3.166;DP=111;FS=0.000;HRun=0;HaplotypeScore=41.3545;InbreedingCoeff=0.4552;MQ=51.06;MQ0=3;MQRankSum=-2.315;QD=19.55;ReadPosRankSum=0.319;VQSLOD=0.7555;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:6:18.06:0,18,1038	./.	0/0:8,0:3:9.03:0,9,337	0/0:9,0:6:16.30:0,16,631	0/0:3,0:3:9.03:0,9,543	0/0:3,0:3:9.03:0,9,543	0/0:10,0:10:30.10:0,30,1682	1/1:3,8:9:11.96:178,12,0	./.	0/0:1,0:1:3.01:0,3,181	0/0:3,0:3:9.03:0,9,473	0/0:2,0:2:6.02:0,6,362	0/0:2,0:2:6.02:0,6,362	0/0:2,0:2:5.99:0,6,202	0/0:2,0:2:6.02:0,6,341	0/0:3,0:3:9.03:0,9,530	0/0:6,0:6:18.06:0,18,1084	0/0:7,0:7:21.07:0,21,1134	0/0:5,0:2:3.01:0,3,124	0/0:3,0:3:9.03:0,9,489	0/0:10,0:10:27.09:0,27,1522	0/0:2,0:2:6.02:0,6,318	0/0:2,0:2:6.02:0,6,318	0/0:5,0:5:15.05:0,15,904	0/0:2,0:2:6.02:0,6,319	1/1:0,4:3:6.02:218,6,0	./.	./.
chr10	598732	.	A	ATGG	879.03	PASS	AB=0.800;AC=15;AF=0.313;AN=48;BaseQRankSum=-2.830;DP=389;FS=0.869;HRun=0;HaplotypeScore=57.1301;InbreedingCoeff=0.6404;MQ=72.21;MQ0=0;MQRankSum=-1.212;QD=8.37;ReadPosRankSum=-1.846;VQSLOD=1.9898;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:21:7.24:64,7,0	0/0:4,0:4:8.99:0,9,87	1/1:19,0:18:2.04:6,2,0	0/0:21,0:17:5.99:0,6,61	./.	0/0:13,0:13:21.04:0,21,251	0/0:24,0:24:39.06:0,39,461	1/1:13,0:13:3.44:21,3,0	1/1:0,10:10:24.08:468,24,0	0/0:10,0:10:9.02:0,9,110	./.	0/0:24,0:24:56.92:0,57,741	0/0:16,0:16:30.01:0,30,370	0/0:9,0:9:21.07:0,21,279	0/0:12,0:12:18.06:0,18,243	0/0:11,0:11:18.02:0,18,209	1/1:19,1:29:6.49:79,6,0	0/0:15,0:15:21.04:0,21,264	0/0:12,0:9:2.98:0,3,40	./.	0/0:52,0:52:69.12:0,69,830	./.	0/0:5,0:5:3.01:0,3,41	0/0:26,0:26:51.15:0,51,670	0/0:9,0:9:12.03:0,12,147	0/1:3,1:4:28.44:163,0,28	1/1:1,4:5:9.03:175,9,0	1/1:1,2:3:3.01:59,3,0
chr10	599875	.	TG	T	2225.23	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.834;DP=656;FS=2.477;HRun=1;HaplotypeScore=60.2587;InbreedingCoeff=0.9989;MQ=84.00;MQ0=0;MQRankSum=-2.695;QD=32.72;ReadPosRankSum=2.114;VQSLOD=3.4711;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,41:41:99:1425,102,0	0/0:9,0:9:27.09:0,27,423	0/0:26,0:26:69.23:0,69,1056	0/0:18,0:18:45.13:0,45,677	0/0:27,0:27:75.24:0,75,1173	0/0:24,0:24:72.25:0,72,1145	0/0:10,0:10:30.08:0,30,433	0/0:20,0:20:60.19:0,60,936	0/0:21,0:21:60.19:0,60,934	0/0:23,0:23:66.23:0,66,1055	0/0:24,0:24:69.23:0,69,1090	0/0:16,0:16:42.14:0,42,669	0/0:23,0:23:69.19:0,69,1051	0/0:25,0:25:72.25:0,72,1148	0/0:33,0:33:99:0,99,1534	0/0:20,0:20:57.18:0,57,887	1/1:1,26:27:66.22:922,66,0	0/0:22,0:21:66.23:0,66,1054	0/0:28,0:28:84.27:0,84,1294	0/0:29,0:29:84.29:0,84,1334	0/0:38,0:38:99:0,114,1817	0/0:23,0:23:69.22:0,69,1075	0/0:23,0:23:63.21:0,63,1003	0/0:17,0:17:48.16:0,48,767	0/0:26,0:26:78.27:0,78,1234	0/0:23,0:23:69.23:0,69,1081	0/0:30,0:30:81.28:0,81,1282	0/0:10,0:10:30.10:0,30,479
chr10	600035	.	CA	C	1805.68	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=3.683;DP=541;FS=12.834;HRun=3;HaplotypeScore=47.5852;InbreedingCoeff=0.9548;MQ=54.23;MQ0=21;MQRankSum=2.492;QD=23.76;ReadPosRankSum=2.967;VQSLOD=1.9606;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,28:29:66.21:815,66,0	0/0:5,0:4:12.03:0,12,153	0/0:9,0:8:24.08:0,24,340	0/0:12,0:7:11.76:0,12,135	0/0:21,0:20:53.98:0,54,658	0/0:27,0:26:72.24:0,72,1023	0/0:15,0:13:33.11:0,33,471	0/0:27,0:21:63.13:0,63,836	0/0:11,0:10:24.08:0,24,341	0/0:26,0:26:78.23:0,78,1064	0/0:9,0:9:27.09:0,27,385	0/0:16,0:14:30.06:0,30,405	0/0:13,0:9:24.08:0,24,328	0/0:21,0:18:48.12:0,48,657	0/0:23,0:17:42.14:0,42,601	0/0:17,0:14:39.05:0,39,511	1/1:1,41:40:90.28:1112,90,0	0/0:38,0:32:84.25:0,84,1168	0/0:23,0:17:48.16:0,48,687	0/0:23,0:22:66.18:0,66,920	0/0:17,0:14:33.11:0,33,471	0/0:11,0:10:30.10:0,30,428	0/0:11,0:10:27.09:0,27,384	0/0:14,0:10:15.05:0,15,214	0/0:20,0:17:51.17:0,51,727	0/0:23,0:22:66.19:0,66,897	0/0:18,0:17:39.09:0,39,533	0/0:15,0:8:24.08:0,24,343
chr10	602101	.	AAT	A	59.13	PASS	AC=4;AF=0.333;AN=12;BaseQRankSum=0.296;DP=565;FS=0.000;HRun=0;HaplotypeScore=4.9235;MQ=8.74;MQ0=345;MQRankSum=0.895;QD=1.85;ReadPosRankSum=0.731;VQSLOD=0.2072;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	0/0:37,0:7:6.02:0,6,115	./.	./.	./.	./.	0/0:31,0:3:9.03:0,9,173	./.	./.	./.	./.	./.	./.	./.	./.	./.	0/0:28,0:2:3.01:0,3,58	./.	./.	./.	./.	0/0:28,0:1:3.01:0,3,58	1/1:8,9:2:3.01:46,3,0	1/1:10,5:2:6.02:92,6,0	./.
chr10	607580	.	CA	C	2034.94	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.504;DP=604;FS=3.942;HRun=3;HaplotypeScore=59.1903;InbreedingCoeff=0.9972;MQ=80.98;MQ0=0;MQRankSum=-1.155;QD=31.31;ReadPosRankSum=2.122;VQSLOD=3.6802;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,37:37:99:1264,102,0	0/0:7,0:7:21.07:0,21,302	0/0:21,0:21:60.16:0,60,800	0/0:15,0:15:32.03:0,32,430	0/0:33,0:33:96.28:0,96,1350	0/0:30,0:30:75.25:0,75,1079	0/0:12,0:12:27.09:0,27,389	0/0:24,0:24:69.23:0,69,993	0/0:15,0:15:42.10:0,42,548	0/0:27,0:27:78.26:0,78,1108	0/0:17,0:17:51.13:0,51,710	0/0:24,0:24:60.20:0,60,863	0/0:18,0:18:51.17:0,51,725	0/0:17,0:17:48.16:0,48,683	0/0:20,0:20:54.17:0,54,737	0/0:18,0:18:51.15:0,51,700	1/1:1,27:28:72.23:892,72,0	0/0:17,0:17:45.11:0,45,623	0/0:17,0:17:51.15:0,51,699	0/0:17,0:17:48.13:0,48,668	0/0:26,0:26:75.25:0,75,1079	0/0:22,0:22:57.19:0,57,820	0/0:24,0:24:66.22:0,66,927	0/0:28,0:28:84.28:0,84,1207	0/0:15,0:15:45.12:0,45,618	0/0:26,0:26:69.23:0,69,993	0/0:29,0:29:75.21:0,75,1041	0/0:20,0:20:60.19:0,60,846
chr10	608005	.	AGGCAGG	A	16638.63	PASS	AB=0.773;AC=54;AF=0.964;AN=56;BaseQRankSum=-1.673;DP=595;FS=0.000;HRun=0;HaplotypeScore=135.6557;InbreedingCoeff=-0.0458;MQ=62.64;MQ0=0;MQRankSum=-0.264;QD=27.96;ReadPosRankSum=2.916;VQSLOD=4.5810;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,26:34:35.96:704,36,0	1/1:2,11:13:26.82:397,27,0	0/1:9,8:12:44.38:268,0,44	0/1:22,4:22:63.73:107,0,64	1/1:5,13:18:20.94:293,21,0	1/1:4,16:20:36.12:773,36,0	1/1:7,25:32:57.20:1216,57,0	1/1:5,20:25:51.06:726,51,0	1/1:1,18:19:30.10:651,30,0	1/1:8,12:20:30.04:520,30,0	1/1:5,8:13:12.04:260,12,0	1/1:5,16:21:45.06:885,45,0	1/1:3,13:16:27.02:514,27,0	1/1:7,17:24:36.05:708,36,0	1/1:7,21:28:54.19:1172,54,0	1/1:6,19:25:42.08:864,42,0	1/1:8,15:23:21.07:430,21,0	1/1:5,16:21:24.08:521,24,0	1/1:5,12:17:36.05:600,36,0	1/1:3,11:14:20.94:294,21,0	1/1:13,12:25:5.04:129,5,0	1/1:4,14:18:30.05:578,30,0	1/1:7,6:13:12.04:260,12,0	1/1:12,11:23:12.04:261,12,0	1/1:6,22:28:42.14:892,42,0	1/1:8,21:29:60.11:1054,60,0	1/1:5,18:23:48.16:1041,48,0	1/1:0,10:10:24.08:521,24,0
chr10	608260	.	A	AT	1710.20	PASS	AB=0.810;AC=11;AF=0.196;AN=56;BaseQRankSum=-1.241;DP=590;FS=15.605;HRun=11;HaplotypeScore=66.2750;InbreedingCoeff=0.7020;MQ=72.27;MQ0=1;MQRankSum=-1.276;QD=11.18;ReadPosRankSum=-3.390;VQSLOD=0.5796;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:72.58:0,73,559	0/0:8,0:8:14.93:0,15,116	0/1:15,1:16:1.89:2,0,112	0/0:11,0:11:16.53:0,17,105	0/0:31,1:32:38.23:0,38,478	0/0:20,0:21:40.81:0,41,308	0/0:15,0:17:36.90:0,37,265	1/1:6,1:34:74.32:405,74,0	0/1:6,20:26:10.49:430,0,10	0/0:20,0:20:44.49:0,44,348	0/0:17,0:17:47.82:0,48,371	0/0:23,1:25:25.34:0,25,370	0/0:13,0:14:22.92:0,23,168	0/0:19,0:19:47.30:0,47,355	0/0:29,1:30:41.22:0,41,501	0/0:21,1:23:28.36:0,28,393	0/1:11,1:12:6.55:7,0,139	0/0:16,1:17:11.53:0,12,271	0/0:16,0:17:25.85:0,26,189	0/0:28,0:28:48.14:0,48,473	0/0:25,0:25:25.38:0,25,345	0/0:18,1:19:20.35:0,20,341	0/0:22,0:22:53.76:0,54,418	0/0:15,1:18:12.43:0,12,256	0/0:24,0:24:41.76:0,42,325	1/1:7,16:24:27.68:441,28,0	1/1:7,17:25:30.43:439,30,0	1/1:3,13:16:15.03:152,15,0
chr10	609197	.	AAAAG	A	1226.08	PASS	AB=1.000;AC=6;AF=0.107;AN=56;BaseQRankSum=4.541;DP=536;FS=6.562;HRun=0;HaplotypeScore=90.6656;InbreedingCoeff=0.6258;MQ=51.05;MQ0=18;MQRankSum=-3.066;QD=14.42;ReadPosRankSum=-1.394;VQSLOD=1.9013;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,12:31:75.60:769,76,0	0/0:3,0:3:5.97:0,6,88	0/0:13,0:5:8.97:0,9,136	0/1:11,0:5:16.41:16,0,73	0/0:22,0:21:53.19:0,53,972	0/0:18,0:17:15.49:0,15,547	0/0:20,0:18:43.01:0,43,753	0/0:30,0:29:71.31:0,71,963	0/0:21,0:21:35.34:0,35,537	0/0:21,0:19:53.71:0,54,813	0/0:12,0:10:27.30:0,27,286	0/0:15,0:15:41.23:0,41,664	0/0:17,0:17:47.50:0,48,720	0/0:13,0:13:32:0,32,483	0/0:24,0:24:65.86:0,66,961	0/0:17,0:17:35.50:0,35,763	1/1:14,10:22:48.34:569,48,0	0/0:28,0:26:73.79:0,74,1001	0/0:20,0:19:56.92:0,57,839	0/0:21,0:15:38.76:0,39,508	0/1:18,0:17:0.02:0,0,410	0/0:9,0:9:21.07:0,21,426	0/0:21,0:21:46.66:0,47,566	0/0:24,0:24:55.76:0,56,971	0/0:22,0:19:44.76:0,45,623	0/0:27,0:27:62.07:0,62,926	0/0:20,0:19:43.35:0,43,789	0/0:13,0:11:6.75:0,7,570
chr10	609200	.	AG	A	737.09	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.431;DP=546;FS=2.956;HRun=1;HaplotypeScore=66.5723;InbreedingCoeff=0.9165;MQ=51.83;MQ0=16;MQRankSum=-4.969;QD=13.40;ReadPosRankSum=-0.871;VQSLOD=2.3367;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:31,1:32:73.02:528,73,0	0/0:5,0:5:11.87:0,12,90	0/0:14,0:6:8.27:0,8,67	0/0:13,0:6:10.50:0,11,118	0/0:23,0:22:49.14:0,49,478	0/0:20,0:19:46.62:0,47,388	0/0:20,0:18:31.40:0,31,380	0/0:32,0:31:75.47:0,75,704	0/0:20,0:20:15.21:0,15,298	0/0:22,0:20:41.85:0,42,495	0/0:12,0:10:23.60:0,24,173	0/0:16,0:16:41.87:0,42,360	0/0:18,0:18:31.26:0,31,413	0/0:17,0:17:43.85:0,44,376	0/0:25,0:25:25.56:0,26,460	0/0:17,0:17:43.63:0,44,414	1/1:23,0:21:31.60:330,32,0	0/0:27,1:26:45.92:0,46,543	0/0:20,1:20:32.15:0,32,444	0/0:17,0:14:41.39:0,41,330	0/0:18,0:17:37.58:0,38,324	0/0:9,0:9:17.19:0,17,168	0/0:21,0:21:45.39:0,45,398	0/0:23,1:24:49.19:0,49,508	0/0:23,0:20:37.19:0,37,330	0/0:25,0:25:41.71:0,42,466	0/0:19,0:18:40.31:0,40,414	0/0:12,0:11:25.69:0,26,268
chr10	609885	.	ACT	A	309.88	PASS	AB=0.962;AC=16;AF=0.333;AN=48;BaseQRankSum=2.274;DP=582;FS=7.598;HRun=0;HaplotypeScore=76.5243;InbreedingCoeff=0.0637;MQ=33.83;MQ0=162;MQRankSum=-1.019;QD=1.16;ReadPosRankSum=0.024;VQSLOD=-0.0346;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/0:14,0:7:0:0,0,0	./.	./.	0/0:13,0:7:5.77:0,6,31	0/0:17,0:6:9.01:0,9,111	0/1:21,0:13:23.39:23,0,50	0/0:42,0:10:2.04:0,2,6	1/1:33,0:21:2.92:17,3,0	0/0:25,0:15:17.29:0,17,181	0/0:23,0:16:3.92:0,4,13	0/1:21,0:11:20.23:20,0,103	0/1:15,0:10:17.13:17,0,125	0/0:17,0:20:6:0,6,53	0/1:22,4:17:20.40:20,0,69	0/1:23,1:19:42.88:43,0,135	0/0:33,0:23:24.88:0,25,251	0/0:15,0:11:13.86:0,14,179	1/1:20,3:8:8.71:62,9,0	0/0:28,0:20:5.89:0,6,59	0/0:14,0:9:3.99:0,4,108	0/1:12,0:9:38.88:39,0,39	0/1:21,3:19:17.46:17,0,152	0/0:26,0:18:18.51:0,19,231	0/1:19,0:14:37.49:51,0,37	1/1:26,0:12:10.85:73,11,0	1/1:20,1:14:9.45:75,9,0	./.
chr10	609928	.	CTCTT	C	314.19	PASS	AB=1.000;AC=11;AF=0.204;AN=54;BaseQRankSum=3.401;DP=559;FS=1.322;HRun=0;HaplotypeScore=82.7940;InbreedingCoeff=0.5078;MQ=43.27;MQ0=57;MQRankSum=-1.284;QD=2.12;ReadPosRankSum=-0.881;VQSLOD=1.5722;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:24,1:14:8.82:61,9,0	0/0:6,0:5:5.82:0,6,35	0/0:31,0:2:5.99:0,6,49	0/0:44,0:10:12.30:0,12,113	0/0:17,0:12:20.90:0,21,196	0/0:22,0:19:47.92:0,48,558	0/0:19,0:16:33.71:0,34,309	0/1:20,0:7:9.91:44,0,10	1/1:30,1:30:1.37:16,1,0	0/0:16,0:13:36.53:0,37,553	0/0:17,0:15:38.82:0,39,311	0/0:16,0:13:16.37:0,16,338	0/0:15,0:13:18.14:0,18,368	0/0:17,0:13:6.96:0,7,131	0/0:31,0:28:52.29:0,52,623	0/0:19,0:18:24.57:0,25,575	0/1:27,0:20:58.37:58,0,399	0/0:23,0:21:59.88:0,60,723	0/1:12,0:9:11.23:11,0,146	0/0:11,0:10:20.31:0,20,217	0/0:15,0:14:26.12:0,26,380	0/0:14,0:13:13.91:0,14,291	0/0:26,0:23:41.60:0,42,493	0/0:33,0:28:74.14:0,74,902	0/0:12,0:11:6.61:0,7,193	1/1:7,11:14:26.46:208,26,0	1/1:14,1:13:9.29:67,9,0	./.
chr10	610492	.	GAACAATCATGAGAAAGAGGAAGCTTCTCCCAGGAACTGGCAGACCATAAAGTTC	G	805.03	PASS	AB=0.875;AC=11;AF=0.196;AN=56;BaseQRankSum=4.624;DP=520;FS=12.791;HRun=0;HaplotypeScore=572.3941;InbreedingCoeff=0.6060;MQ=55.76;MQ0=27;MQRankSum=-2.809;QD=8.56;ReadPosRankSum=-0.998;VQSLOD=-0.4236;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:21,0:14:36.11:36,0,297	0/0:12,0:12:33.08:0,33,3654	0/0:19,0:14:25.83:0,26,1744	0/0:25,0:12:33.11:0,33,1316	0/0:23,0:23:69.10:0,69,6834	0/0:22,0:22:54.17:0,54,5320	0/0:20,0:20:54.13:0,54,3661	1/1:21,0:8:11.90:141,12,0	1/1:8,0:6:6.01:82,6,0	0/0:25,0:25:69.16:0,69,8337	0/0:18,0:18:47.98:0,48,5698	0/0:22,0:22:57.19:0,57,6408	0/0:24,0:24:63.08:0,63,6821	0/0:9,0:9:27.08:0,27,2779	0/0:27,0:27:72.22:0,72,7499	0/0:8,0:8:21.07:0,21,2495	0/1:16,0:14:47.34:47,0,530	0/0:19,0:17:48.14:0,48,5444	0/0:19,0:18:51.15:0,51,5963	0/0:30,0:30:84.23:0,84,8402	0/0:10,0:10:30.10:0,30,4111	0/0:24,0:24:72.22:0,72,8216	0/0:29,0:29:78.20:0,78,7140	0/0:25,0:25:72.20:0,72,7881	0/0:16,0:16:42.12:0,42,4953	0/1:4,6:10:99:260,0,521	1/1:14,0:12:20.97:262,21,0	1/1:4,0:3:9.03:139,9,0
chr10	615385	.	A	AACTTAG	13857.83	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-9.815;DP=663;FS=9.118;HRun=0;HaplotypeScore=128.0678;InbreedingCoeff=0.9884;MQ=82.72;MQ0=0;MQRankSum=-14.673;QD=82.00;ReadPosRankSum=-1.635;VQSLOD=5.7487;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,14:22:38.72:1298,39,0	0/0:7,0:7:21.05:0,21,467	0/0:43,0:40:85.22:0,85,1942	0/0:29,0:27:59.65:0,60,1253	0/0:35,0:35:99:0,102,2401	0/0:27,0:27:81.28:0,81,1974	0/0:21,0:21:57.14:0,57,1173	1/1:6,23:39:99:3805,114,0	1/1:5,17:27:63.22:2278,63,0	0/0:27,0:27:81.24:0,81,1690	0/0:32,0:32:93.29:0,93,2111	0/0:20,0:20:57.20:0,57,1403	0/0:27,0:27:81.25:0,81,1853	0/0:25,0:25:69.19:0,69,1495	0/0:17,0:17:51.17:0,51,1183	0/0:17,0:17:51.14:0,51,1066	1/1:4,8:15:30.10:1091,30,0	0/0:12,0:12:33.07:0,33,758	0/0:14,0:14:39.11:0,39,842	0/0:30,0:30:90.28:0,90,2119	0/0:17,0:17:45.15:0,45,1037	0/0:26,0:26:78.27:0,78,1914	0/0:15,0:15:45.15:0,45,1107	0/0:29,0:29:81.25:0,81,1866	0/0:24,0:24:69.23:0,69,1651	1/1:0,24:29:87.20:2685,87,0	1/1:4,20:30:69.17:2385,69,0	1/1:1,6:7:9.03:315,9,0
chr10	620294	.	AAG	A	614.17	PASS	AB=0.955;AC=24;AF=0.462;AN=52;BaseQRankSum=0.728;DP=630;FS=16.175;HRun=0;HaplotypeScore=95.8604;InbreedingCoeff=0.3464;MQ=56.44;MQ0=17;MQRankSum=2.222;QD=1.78;ReadPosRankSum=0.245;VQSLOD=0.8870;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:31,0:31:9.63:43,10,0	0/1:6,0:6:4.33:4,0,57	./.	./.	0/1:25,1:25:24.53:25,0,131	0/1:16,3:19:11.98:43,0,12	1/1:12,5:17:3.48:34,3,0	0/0:33,0:33:8.92:0,9,61	0/0:2,0:27:3:0,3,25	0/1:24,0:24:14.31:14,0,152	0/1:28,0:25:12.23:12,0,193	1/1:21,0:21:8.97:80,9,0	1/1:27,2:29:14.77:129,15,0	1/1:17,3:20:3.01:32,3,0	0/0:17,0:19:24.05:0,24,281	1/1:15,7:22:5.94:65,6,0	0/0:22,0:20:7.88:0,8,64	0/0:11,0:11:5.85:0,6,57	0/0:13,0:11:0:0,0,0	0/1:26,3:28:28.57:29,0,40	0/0:21,0:21:9.47:0,9,90	0/0:14,0:13:8:0,8,126	1/1:18,2:21:17.27:126,17,0	1/1:20,8:29:11.53:74,12,0	1/1:21,0:21:9.16:76,9,0	0/0:30,0:28:19.29:0,19,152	0/0:22,0:21:17.33:0,17,139	0/0:13,0:12:5.48:0,5,38
chr10	621126	.	AAAGGAAGGAAGGAAGG	A	506.60	PASS	AB=1.000;AC=7;AF=0.140;AN=50;BaseQRankSum=2.686;DP=450;FS=5.154;HRun=0;HaplotypeScore=190.9206;InbreedingCoeff=0.2891;MQ=60.70;MQ0=15;MQRankSum=-1.080;QD=5.28;ReadPosRankSum=-0.022;VQSLOD=2.4099;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:35,0:35:18.47:18,0,244	0/0:4,0:4:9.03:0,9,274	./.	./.	0/0:13,0:13:9.03:0,9,222	0/0:22,0:21:36.12:0,36,1081	0/0:18,0:13:9.03:0,9,157	0/0:26,0:26:3.40:0,3,18	0/0:21,0:22:27.09:0,27,420	0/0:16,0:15:24.08:0,24,544	0/0:7,0:7:3.01:0,3,42	0/0:23,0:23:12.04:0,12,515	0/0:15,0:15:12.04:0,12,336	0/0:11,0:11:7.25:0,7,106	0/0:23,0:22:18.05:0,18,666	0/0:25,0:24:37.48:0,37,1635	0/1:16,0:16:51.92:52,0,52	0/0:19,0:19:16.61:0,17,369	0/0:15,0:14:12.04:0,12,306	0/0:5,0:5:3.01:0,3,177	0/0:17,0:14:21.07:0,21,735	0/0:14,0:14:9.03:0,9,169	0/0:11,0:11:12.04:0,12,293	0/1:20,0:21:8.62:9,0,741	0/0:13,0:12:6.49:0,6,169	1/1:8,8:15:21.07:449,21,0	1/1:8,0:7:6.02:105,6,0	./.
chr10	621154	.	GA	G	617.96	PASS	AB=0.610;AC=3;AF=0.056;AN=54;BaseQRankSum=4.729;DP=398;FS=5.273;HRun=2;HaplotypeScore=66.9922;InbreedingCoeff=0.4034;MQ=49.21;MQ0=41;MQRankSum=-2.647;QD=14.04;ReadPosRankSum=3.746;VQSLOD=3.1550;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:9,16:24:65.86:427,0,66	0/0:4,0:4:9.87:0,10,96	./.	0/0:4,0:1:2.98:0,3,22	0/0:8,0:7:21.02:0,21,264	0/0:19,0:19:33.03:0,33,306	0/0:17,0:11:23.87:0,24,306	0/0:21,0:19:44.86:0,45,555	0/0:22,0:20:29.92:0,30,478	0/0:18,0:16:42.59:0,43,566	0/0:6,0:6:12.04:0,12,164	0/0:9,0:9:27.09:0,27,382	0/0:10,0:9:27.07:0,27,347	0/0:10,0:9:21.11:0,21,340	0/0:20,0:18:48.15:0,48,675	0/0:24,0:22:58.12:0,58,823	1/1:10,9:17:4.35:283,4,0	0/0:19,0:18:48.06:0,48,623	0/0:20,0:11:27.08:0,27,354	0/0:5,0:4:12.03:0,12,156	0/0:20,0:16:48.09:0,48,625	0/0:7,0:6:18.03:0,18,226	0/0:13,1:13:30.04:0,30,375	0/0:26,0:25:63.63:0,64,856	0/0:10,0:9:25.30:0,25,306	0/0:21,0:18:53.36:0,53,674	0/0:10,0:8:21.96:0,22,293	0/0:8,0:8:24.08:0,24,323
chr10	622338	.	AAG	A	1410.11	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=7.957;DP=415;FS=0.000;HRun=0;HaplotypeScore=48.1952;InbreedingCoeff=0.6820;MQ=54.71;MQ0=26;MQRankSum=-10.368;QD=11.56;ReadPosRankSum=-6.861;VQSLOD=1.6501;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:21,0:15:18.53:19,0,52	0/0:6,0:6:18.06:0,18,286	0/0:25,0:6:10.26:0,10,165	0/0:21,0:5:11.06:0,11,131	0/0:15,0:15:38.43:0,38,503	0/0:14,0:14:39.08:0,39,573	0/0:16,0:14:33.04:0,33,493	1/1:13,4:15:26.80:252,27,0	1/1:4,5:9:20.87:213,21,0	0/0:16,0:16:45.13:0,45,696	0/0:15,0:15:44.58:0,45,647	0/0:12,0:11:23.11:0,23,442	0/0:11,0:11:27.03:0,27,377	0/0:15,0:14:42.13:0,42,640	0/0:15,0:14:39.13:0,39,497	0/0:12,0:12:36.06:0,36,478	0/1:14,0:10:4.58:34,0,5	0/0:11,0:9:1.23:0,1,208	0/0:10,0:8:3.72:0,4,251	0/0:15,0:14:38.65:0,39,512	0/1:9,0:9:1.33:1,0,146	0/0:12,0:10:30.08:0,30,451	0/0:15,0:13:39.04:0,39,560	0/0:25,0:21:55.85:0,56,841	0/0:12,0:12:33.10:0,33,504	1/1:18,6:21:43.61:501,44,0	1/1:7,10:14:38.19:431,38,0	1/1:9,2:5:12.01:135,12,0
chr10	622430	.	GA	G	1909.97	PASS	AB=0.804;AC=12;AF=0.214;AN=56;BaseQRankSum=6.813;DP=486;FS=4.900;HRun=3;HaplotypeScore=45.8759;InbreedingCoeff=0.5767;MQ=46.90;MQ0=49;MQRankSum=-3.619;QD=14.25;ReadPosRankSum=-0.755;VQSLOD=2.2971;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:17,8:21:2.70:255,0,3	0/0:8,0:7:21.01:0,21,251	0/0:26,0:2:6.02:0,6,78	0/0:18,0:2:6:0,6,65	0/0:17,0:15:33.11:0,33,449	0/0:18,0:18:20.40:0,20,665	0/0:25,0:17:39.08:0,39,530	1/1:7,11:14:33.10:393,33,0	1/1:3,9:10:8.09:276,8,0	0/1:12,1:11:13.70:14,0,266	0/0:14,0:13:30.05:0,30,370	0/0:15,0:14:39.13:0,39,532	0/0:16,0:15:23.66:0,24,463	0/0:11,0:10:30.10:0,30,415	0/0:28,0:24:69.23:0,69,938	0/0:19,0:16:45.12:0,45,588	0/1:23,1:14:28.30:28,0,367	0/0:18,0:13:36.11:0,36,470	0/0:8,0:7:21.07:0,21,281	0/0:21,0:20:48.16:0,48,657	0/0:18,0:17:40.92:0,41,522	0/0:15,0:15:42.13:0,42,564	0/0:14,0:11:30.06:0,30,407	0/0:27,0:22:52.42:0,52,728	0/0:16,0:15:44.12:0,44,555	1/1:4,18:21:11.50:608,12,0	1/1:1,15:13:33.10:406,33,0	0/1:1,3:4:9.53:99,0,10
chr10	622933	.	TA	T	3618.51	PASS	AB=0.627;AC=9;AF=0.161;AN=56;BaseQRankSum=10.567;DP=699;FS=0.841;HRun=2;HaplotypeScore=59.1312;InbreedingCoeff=0.8062;MQ=55.78;MQ0=52;MQRankSum=1.825;QD=27.41;ReadPosRankSum=-0.204;VQSLOD=3.0830;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,147,2179	0/0:5,0:5:15.05:0,15,225	0/0:30,0:3:6.02:0,6,78	0/0:23,0:7:20.99:0,21,239	0/0:19,0:19:54.08:0,54,723	0/0:27,0:27:75.25:0,75,1101	0/0:30,0:29:87.29:0,87,1300	0/1:21,31:35:99:817,0,225	1/1:1,26:27:69.22:895,69,0	0/0:32,0:32:96.32:0,96,1433	0/0:13,0:12:26.83:0,27,404	0/0:30,0:30:90.30:0,90,1337	0/0:26,0:26:72.24:0,72,1078	0/0:23,0:23:66.22:0,66,986	0/0:38,0:38:99:0,114,1686	0/0:17,1:18:15.24:0,15,704	0/0:31,0:31:93.29:0,93,1353	0/0:17,0:17:51.17:0,51,764	0/0:17,0:13:39.13:0,39,583	0/0:19,0:19:57.14:0,57,822	0/0:39,0:38:99:0,111,1635	0/0:21,0:20:60.17:0,60,839	0/0:18,0:18:51.15:0,51,724	0/0:33,0:33:96.30:0,96,1398	0/0:8,0:8:24.06:0,24,320	1/1:1,20:21:60.19:777,60,0	1/1:0,30:30:81.26:1051,81,0	1/1:0,2:2:6.02:78,6,0
chr10	624804	.	C	CT	913.41	PASS	AB=0.874;AC=17;AF=0.304;AN=56;BaseQRankSum=-2.793;DP=343;FS=0.000;HRun=13;HaplotypeScore=43.5226;InbreedingCoeff=0.3843;MQ=54.57;MQ0=20;MQRankSum=-2.291;QD=5.74;ReadPosRankSum=0.019;VQSLOD=1.1036;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,15:20:21.02:195,21,0	0/0:3,0:3:5.95:0,6,41	0/1:7,0:4:1.60:8,0,2	0/0:7,0:6:2.87:0,3,17	0/0:18,0:18:40.64:0,41,273	0/0:12,0:11:20.79:0,21,144	0/0:16,0:16:21.43:0,21,145	1/1:6,8:11:21.73:176,22,0	0/1:6,2:5:8.60:63,0,9	0/0:17,0:17:31.75:0,32,211	0/0:11,0:12:19.83:0,20,129	0/0:11,0:10:5.86:0,6,41	0/0:7,0:6:5.93:0,6,41	0/1:13,0:12:10.37:10,0,32	0/1:11,1:12:7.09:7,0,102	0/0:14,0:14:32.65:0,33,222	0/1:10,9:19:53.42:133,0,53	0/0:17,0:14:29.74:0,30,205	0/1:9,2:7:29.15:44,0,29	0/0:8,1:10:19.89:0,20,129	0/0:11,1:10:11.85:0,12,82	0/0:6,0:6:8.89:0,9,62	0/0:10,0:10:14.81:0,15,103	0/1:13,2:13:1.07:1,0,138	0/0:8,0:8:17.76:0,18,122	1/1:6,7:10:1.40:147,1,0	1/1:4,7:10:18.08:147,18,0	1/1:4,6:9:17.86:154,18,0
chr10	629721	.	AAGGG	A	2559.40	PASS	AB=0.834;AC=14;AF=0.250;AN=56;BaseQRankSum=7.945;DP=416;FS=1.179;HRun=0;HaplotypeScore=71.2302;InbreedingCoeff=0.7671;MQ=75.64;MQ0=5;MQRankSum=0.281;QD=17.65;ReadPosRankSum=-0.388;VQSLOD=2.9387;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,22:29:51.17:842,51,0	0/0:9,0:9:15.04:0,15,319	0/0:32,0:18:11.03:0,11,262	0/1:30,0:22:6.95:7,0,114	0/0:7,0:7:12.04:0,12,293	0/0:17,0:17:36.12:0,36,881	0/0:21,0:21:33.11:0,33,738	1/1:7,10:17:28.33:441,28,0	1/1:7,9:16:21.07:347,21,0	0/0:7,0:7:15.04:0,15,318	0/0:9,0:9:21.07:0,21,512	0/0:20,0:20:42.14:0,42,954	0/0:12,0:12:27.09:0,27,580	0/0:13,0:13:33.10:0,33,703	0/0:19,0:19:39.13:0,39,918	0/0:11,0:11:30.10:0,30,736	1/1:4,7:11:15.05:248,15,0	0/0:7,0:7:12.04:0,12,264	0/0:12,0:12:21.07:0,21,458	0/0:8,0:8:15.04:0,15,321	0/0:23,0:23:48.10:0,48,1073	0/0:12,0:12:30.09:0,30,676	0/0:11,0:11:24.08:0,24,588	0/0:8,0:8:12.04:0,12,294	0/0:13,0:13:30.10:0,30,725	0/1:8,6:14:49.33:323,0,49	1/1:9,12:21:27.09:446,27,0	1/1:6,0:6:6.02:92,6,0
chr10	631838	.	A	AAC	1456.44	PASS	AB=0.858;AC=24;AF=0.462;AN=52;BaseQRankSum=-5.525;DP=499;FS=9.192;HRun=0;HaplotypeScore=83.5969;InbreedingCoeff=-0.0108;MQ=63.60;MQ0=11;MQRankSum=0.979;QD=4.89;ReadPosRankSum=-2.250;VQSLOD=0.9657;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:23:14.36:0,14,89	0/1:7,1:8:3.38:80,0,3	0/0:31,0:12:1.82:0,2,5	./.	0/1:10,1:12:29.84:81,0,30	0/1:17,9:27:0.90:204,0,1	0/1:13,5:19:32.02:92,0,32	1/1:26,0:25:5.94:49,6,0	0/0:10,0:20:22.68:0,23,111	0/0:14,0:15:11.86:0,12,112	0/0:21,0:21:17.61:0,18,154	0/0:8,0:9:2.82:0,3,14	0/1:5,2:7:14.35:81,0,14	1/1:11,1:12:6.02:90,6,0	0/1:5,3:9:34.95:78,0,35	0/1:15,4:19:23.81:81,0,24	0/0:11,0:24:25.09:0,25,125	0/1:14,0:16:39.38:39,0,119	1/1:10,5:13:6.84:156,7,0	0/1:14,0:14:9.07:9,0,44	0/1:23,4:27:44.86:183,0,45	1/1:7,8:15:3.01:45,3,0	1/1:16,1:17:6.34:86,6,0	1/1:12,3:13:8.06:173,8,0	0/1:13,6:19:55.53:76,0,56	./.	0/0:10,0:18:14.20:0,14,70	0/1:13,0:19:14.01:14,0,42
chr10	634355	.	GA	G	136.33	PASS	AB=0.909;AC=4;AF=0.071;AN=56;BaseQRankSum=5.686;DP=570;FS=1.326;HRun=12;HaplotypeScore=64.3293;InbreedingCoeff=0.3738;MQ=70.67;MQ0=1;MQRankSum=1.133;QD=2.96;ReadPosRankSum=1.554;VQSLOD=-0.7638;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,4:39:23.19:0,23,742	0/0:11,1:12:6.92:0,7,245	0/1:12,1:10:6.68:7,0,100	0/0:16,0:14:11.27:0,11,97	0/0:23,1:25:31.22:0,31,466	0/0:21,1:23:33.89:0,34,525	0/0:12,0:13:35.89:0,36,343	0/0:21,0:23:38.97:0,39,355	0/0:10,0:10:24.05:0,24,241	0/0:15,1:17:21.68:0,22,378	0/0:33,1:34:29.21:0,29,644	0/0:20,0:20:25.38:0,25,404	0/0:21,1:21:7.10:0,7,406	0/0:16,1:17:8.95:0,9,254	0/0:25,0:28:71.98:0,72,715	0/0:22,1:24:32.26:0,32,469	1/1:3,11:17:32.99:227,33,0	0/0:14,0:14:30.94:0,31,306	0/0:17,1:21:24.39:0,24,385	0/0:24,0:25:36.69:0,37,494	0/0:18,0:20:38.81:0,39,372	0/0:15,1:18:9.49:0,9,244	0/0:18,1:20:23.70:0,24,411	0/0:20,0:20:3.93:0,4,329	0/1:14,2:16:10.15:10,0,320	0/0:20,1:21:21.84:0,22,385	0/0:25,0:25:69.14:0,69,700	0/0:16,1:17:18.41:0,18,372
chr10	634601	.	C	CA	254.39	PASS	AB=0.989;AC=25;AF=0.446;AN=56;BaseQRankSum=5.360;DP=531;FS=1.661;HRun=14;HaplotypeScore=91.3506;InbreedingCoeff=0.1135;MQ=49.33;MQ0=25;MQRankSum=-3.737;QD=0.82;ReadPosRankSum=1.693;VQSLOD=-0.6322;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:15:11.15:58,11,0	0/1:8,0:8:14.90:15,0,46	0/0:44,0:10:6.17:0,6,31	0/1:49,0:10:7:7,0,8	0/1:21,2:21:65.87:66,0,80	0/0:17,0:16:15.67:0,16,100	0/0:14,0:13:12.85:0,13,74	1/1:28,0:27:0.31:2,0,0	1/1:9,0:10:9.80:41,10,0	0/0:26,1:26:2.35:0,2,157	0/0:29,1:30:22.10:0,22,257	0/1:12,0:12:11.25:11,0,23	0/1:17,0:17:42.39:42,0,52	0/1:14,0:14:20.12:32,0,20	0/0:14,0:13:22.05:0,22,124	0/1:18,0:19:46.76:47,0,75	1/1:7,0:7:0.47:1,0,0	0/1:20,0:20:19.20:19,0,66	0/0:24,0:21:3.58:0,4,139	0/0:18,0:21:32.86:0,33,180	0/0:7,0:4:8.86:0,9,58	0/0:9,0:9:11.69:0,12,76	0/0:15,0:13:22.53:0,23,132	1/1:11,0:11:1.35:13,1,0	0/1:14,0:14:23.70:24,0,62	1/1:21,0:20:2.37:7,2,0	1/1:21,0:20:5.39:21,5,0	1/1:19,0:19:2.55:7,3,0
chr10	636342	.	C	CT	849.79	PASS	AB=0.938;AC=5;AF=0.089;AN=56;BaseQRankSum=0.245;DP=540;FS=8.818;HRun=11;HaplotypeScore=57.9021;InbreedingCoeff=0.6832;MQ=67.92;MQ0=2;MQRankSum=-0.923;QD=8.67;ReadPosRankSum=1.007;VQSLOD=1.6764;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:11,35:49:44.40:704,44,0	0/0:7,0:7:17.93:0,18,139	0/0:11,0:8:5.34:0,5,61	0/0:7,0:6:6.71:0,7,45	0/0:16,1:16:5.40:0,5,225	0/0:12,0:13:25.92:0,26,192	0/0:20,0:22:37.82:0,38,284	0/0:28,0:29:63.34:0,63,472	0/0:9,0:8:22.71:0,23,162	0/0:12,0:12:26.88:0,27,209	0/0:19,0:19:11.42:0,11,271	0/0:15,0:16:25.90:0,26,191	0/1:14,1:15:2.42:2,0,236	0/0:19,0:20:46.63:0,47,348	0/0:16,0:17:37.75:0,38,275	0/0:14,0:16:25.88:0,26,192	1/1:5,4:34:45.91:266,46,0	0/0:16,1:17:5.38:0,5,225	0/0:21,0:24:32.33:0,32,309	0/0:18,0:20:42.90:0,43,313	0/0:18,0:18:44.83:0,45,348	0/0:18,0:18:32.85:0,33,255	0/0:19,0:19:36.58:0,37,278	0/0:23,0:24:58.75:0,59,442	0/0:15,1:16:38.80:0,39,297	0/0:26,0:26:56.75:0,57,441	0/0:27,1:31:21.51:0,22,468	0/0:14,0:14:26.82:0,27,204
chr10	639633	.	AAC	A	359.03	PASS	AB=0.875;AC=13;AF=0.241;AN=54;BaseQRankSum=7.307;DP=574;FS=5.140;HRun=0;HaplotypeScore=75.1734;InbreedingCoeff=0.0460;MQ=62.70;MQ0=5;MQRankSum=-2.055;QD=1.71;ReadPosRankSum=-0.150;VQSLOD=0.9113;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:26:25.57:126,26,0	0/1:4,1:5:28.17:28,0,40	0/0:32,0:19:8.82:0,9,137	./.	0/0:14,1:15:4.94:0,5,515	0/0:18,2:20:4.92:0,5,483	0/0:25,0:25:30.06:0,30,414	0/0:29,0:28:1.93:0,2,444	0/0:15,0:15:21.07:0,21,323	0/1:22,2:24:28.75:29,0,445	0/0:11,0:11:27.09:0,27,402	0/0:19,2:21:4.69:0,5,548	0/1:16,1:17:4.09:4,0,382	0/0:18,0:18:27.09:0,27,403	0/1:24,3:27:26.25:26,0,488	0/0:25,0:25:10.02:0,10,478	1/1:12,0:18:14.20:70,14,0	0/1:10,2:14:66.60:67,0,224	0/0:15,0:14:22.79:0,23,326	0/0:15,0:15:27.09:0,27,408	0/0:32,0:33:69.22:0,69,1008	0/1:20,3:23:48.42:48,0,617	0/0:24,0:24:46.97:0,47,666	0/0:24,0:24:48.16:0,48,739	0/0:10,0:10:12.04:0,12,185	0/1:13,1:14:1.09:1,0,429	0/1:26,3:30:37.38:37,0,505	0/1:9,3:12:75.49:75,0,238
chr10	648980	.	AT	A	2954.98	PASS	AB=0.955;AC=15;AF=0.278;AN=54;BaseQRankSum=9.683;DP=469;FS=0.399;HRun=11;HaplotypeScore=50.4380;InbreedingCoeff=0.8633;MQ=65.09;MQ0=3;MQRankSum=0.540;QD=15.63;ReadPosRankSum=0.083;VQSLOD=3.8206;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,18:24:31.03:353,31,0	0/0:9,0:9:24.06:0,24,256	./.	0/0:9,0:8:11.50:0,12,95	0/0:26,2:28:16.61:0,17,564	0/0:24,0:24:60.09:0,60,617	0/0:11,1:12:2.42:0,2,231	1/1:7,26:32:74.86:609,75,0	1/1:1,8:9:20.97:172,21,0	0/0:27,0:27:54.12:0,54,565	0/0:21,0:21:57.10:0,57,581	0/0:12,0:12:27.05:0,27,276	0/0:13,0:13:27.07:0,27,288	0/0:17,0:17:41.84:0,42,424	0/0:14,0:14:39.08:0,39,407	0/0:13,0:13:30.08:0,30,320	1/1:4,18:21:52.69:416,53,0	0/0:10,0:10:27.07:0,27,288	0/1:20,1:20:6.63:7,0,312	0/0:27,0:27:66.05:0,66,663	0/0:4,0:4:9.02:0,9,96	0/0:4,0:4:12.03:0,12,128	0/0:7,0:8:14.87:0,15,142	0/0:7,0:7:18.05:0,18,192	0/0:15,0:15:45.11:0,45,480	1/1:6,22:28:38.91:508,39,0	1/1:4,34:37:92.87:764,93,0	1/1:0,13:13:38.96:320,39,0
chr10	651825	.	G	GT	945.23	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=-1.924;DP=500;FS=5.590;HRun=11;HaplotypeScore=58.1660;InbreedingCoeff=0.8088;MQ=75.61;MQ0=0;MQRankSum=0.363;QD=12.28;ReadPosRankSum=1.063;VQSLOD=3.2734;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,26:30:57.07:568,57,0	0/0:8,0:8:17.91:0,18,139	0/0:26,0:16:20.64:0,21,173	0/1:19,0:13:6.15:6,0,6	0/0:22,0:22:50.77:0,51,394	0/0:10,0:11:28.93:0,29,215	0/0:8,0:7:8.93:0,9,69	0/0:27,2:29:50.67:0,51,385	0/0:9,0:9:26.83:0,27,203	0/0:23,0:23:56.76:0,57,439	0/0:18,0:18:50.80:0,51,395	0/0:17,0:17:38.82:0,39,300	0/0:10,0:10:23.88:0,24,184	0/0:21,0:21:44.79:0,45,348	0/0:14,0:14:20.90:0,21,162	0/0:17,0:18:46.86:0,47,353	1/1:6,21:28:15.81:494,16,0	0/0:15,0:15:32.08:0,32,238	0/0:16,0:17:40.88:0,41,307	0/0:15,0:16:43.86:0,44,329	0/0:16,0:16:38.85:0,39,301	0/0:13,0:13:20.91:0,21,162	0/0:21,0:22:29:0,29,348	0/0:9,0:9:20.86:0,21,155	0/0:28,0:29:73.72:0,74,561	0/0:19,0:19:44.82:0,45,348	0/0:26,0:27:52.76:0,53,399	0/0:6,0:6:17.93:0,18,139
chr10	654176	.	GT	G	957.40	PASS	AB=0.820;AC=10;AF=0.179;AN=56;BaseQRankSum=5.644;DP=629;FS=2.094;HRun=14;HaplotypeScore=79.8334;InbreedingCoeff=0.4859;MQ=69.12;MQ0=0;MQRankSum=0.129;QD=5.95;ReadPosRankSum=1.166;VQSLOD=2.8361;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:39.18:0,39,343	0/0:11,1:12:3.20:0,3,175	0/0:16,0:13:20.51:0,21,155	0/1:11,0:9:18.34:18,0,34	0/0:31,1:32:39.95:0,40,496	0/0:22,0:24:47.87:0,48,425	0/0:14,1:15:6.45:0,6,202	1/1:10,10:20:29.77:193,30,0	0/1:12,13:25:33.82:223,0,34	0/0:23,0:23:33.24:0,33,305	0/0:17,1:18:18.44:0,18,306	0/0:20,0:21:37.94:0,38,311	0/0:22,0:26:35.84:0,36,309	0/0:21,1:22:18.39:0,18,288	0/0:31,1:33:55.94:0,56,603	0/0:19,1:22:18.59:0,19,295	0/0:34,0:34:69.35:0,69,615	0/0:20,2:24:7.72:0,8,309	0/1:22,1:24:1.79:2,0,213	0/0:20,0:25:54.22:0,54,457	0/0:23,0:26:50.08:0,50,412	0/0:14,1:17:15.25:0,15,261	0/0:15,1:20:41.86:0,42,333	0/0:16,0:16:37.59:0,38,334	0/0:20,1:21:24.34:0,24,353	1/1:16,22:40:31.02:343,31,0	0/1:14,14:28:47.01:165,0,47	1/1:2,8:11:25.77:170,26,0
chr10	654856	.	T	TGTTTG	3525.96	PASS	AB=0.680;AC=9;AF=0.161;AN=56;BaseQRankSum=13.407;DP=731;FS=1.251;HRun=0;HaplotypeScore=148.9989;InbreedingCoeff=-0.0241;MQ=67.05;MQ0=2;MQRankSum=-3.052;QD=15.07;ReadPosRankSum=3.544;VQSLOD=3.4503;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:7,0:46:99:931,0,139	0/0:17,0:17:51.14:0,51,981	0/0:29,0:28:58.20:0,58,1100	0/0:32,0:27:74.72:0,75,1192	0/0:24,0:24:69.20:0,69,1296	0/0:25,0:25:75.23:0,75,1462	0/0:13,0:13:39.12:0,39,773	0/1:28,0:28:99:155,0,676	0/1:11,1:26:99:438,0,323	0/0:32,0:32:93.30:0,93,1854	0/0:27,0:27:81.26:0,81,1514	0/0:27,0:27:81.23:0,81,1543	0/0:27,0:27:78.23:0,78,1406	0/0:29,0:29:87.29:0,87,1778	0/1:13,0:36:99:340,0,447	0/0:33,0:33:96.33:0,96,1986	0/1:7,0:26:99:272,0,160	0/0:10,0:10:27.06:0,27,552	0/0:24,0:23:66.05:0,66,1063	0/0:32,0:33:96.32:0,96,1974	0/0:27,0:27:81.28:0,81,1586	0/0:7,0:31:86.49:0,86,1213	0/0:20,0:20:57.19:0,57,1132	0/0:14,0:14:39.13:0,39,875	0/0:22,0:22:63.21:0,63,1249	0/1:22,0:39:99:779,0,766	0/1:15,1:23:99:257,0,416	1/1:2,0:8:1.20:353,1,0
chr10	657892	.	AT	A	1625.86	PASS	AB=0.568;AC=9;AF=0.161;AN=56;BaseQRankSum=9.980;DP=447;FS=0.960;HRun=11;HaplotypeScore=45.1459;InbreedingCoeff=0.8374;MQ=69.17;MQ0=0;MQRankSum=1.213;QD=16.94;ReadPosRankSum=-0.680;VQSLOD=3.9329;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:59.98:0,60,622	0/0:2,0:2:6.02:0,6,64	0/0:15,0:13:23.92:0,24,226	0/0:7,0:5:8.05:0,8,70	0/0:26,0:26:71.90:0,72,733	0/0:19,1:19:29.50:0,29,519	0/0:9,0:9:23.80:0,24,235	1/1:6,24:30:68.90:563,69,0	1/1:2,14:16:35.95:296,36,0	0/0:18,0:18:36.09:0,36,384	0/0:23,0:24:59.84:0,60,597	0/0:12,0:12:33.08:0,33,352	0/0:13,0:13:30.06:0,30,312	0/0:9,0:9:24.03:0,24,235	0/0:19,0:19:36.89:0,37,512	0/0:12,0:12:33.08:0,33,352	0/0:20,0:21:59.96:0,60,612	0/0:17,0:17:39.06:0,39,404	0/0:18,0:18:51.11:0,51,531	0/0:18,1:20:26.45:0,26,475	0/0:8,0:8:21.05:0,21,224	0/0:12,0:12:33.07:0,33,344	0/0:9,0:9:27.05:0,27,279	0/0:11,0:11:24.06:0,24,256	0/0:24,0:24:40.30:0,40,557	0/1:5,16:21:9.94:340,0,10	1/1:2,16:18:44.95:369,45,0	1/1:1,10:11:26.97:222,27,0
chr10	659492	.	C	CT	1547.46	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-5.058;DP=417;FS=1.975;HRun=8;HaplotypeScore=56.0946;InbreedingCoeff=0.8697;MQ=57.22;MQ0=14;MQRankSum=-1.329;QD=18.64;ReadPosRankSum=-1.932;VQSLOD=3.0428;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:23:39.69:0,40,391	0/0:8,0:8:20.98:0,21,183	0/0:24,0:5:10.66:0,11,73	0/0:23,0:7:1.18:0,1,3	0/0:18,0:18:19.71:0,20,181	0/0:10,0:10:24.01:0,24,220	0/0:13,0:13:20.99:0,21,187	1/1:10,11:19:30.09:346,30,0	1/1:1,9:10:21.05:233,21,0	0/0:19,0:18:42:0,42,383	0/0:16,0:16:32.99:0,33,297	0/0:11,0:11:21:0,21,192	0/0:7,0:7:8.85:0,9,82	0/0:9,0:9:8.92:0,9,74	0/0:12,0:12:29.97:0,30,265	0/0:9,0:9:24:0,24,212	0/0:21,0:20:8:0,8,80	0/0:22,0:22:32.01:0,32,275	0/0:16,0:14:36:0,36,325	0/0:12,0:12:14.96:0,15,137	0/0:4,0:4:6:0,6,54	0/0:10,0:10:24:0,24,218	0/0:24,0:24:35.94:0,36,328	0/0:8,0:7:8.94:0,9,70	0/0:14,0:14:23.48:0,23,219	1/1:5,15:20:42.07:460,42,0	1/1:4,12:15:33.09:370,33,0	1/1:5,11:16:27.08:311,27,0
chr10	662409	.	A	AAAG	900.78	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-0.667;DP=421;FS=11.967;HRun=0;HaplotypeScore=65.8691;InbreedingCoeff=0.6675;MQ=59.15;MQ0=10;MQRankSum=-1.955;QD=29.06;ReadPosRankSum=-0.124;VQSLOD=2.7962;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,6:14:32.58:430,33,0	0/0:4,0:4:12.04:0,12,186	0/0:32,0:11:1.53:0,2,97	0/0:57,0:13:3.05:0,3,113	0/0:19,0:18:51.13:0,51,780	0/0:12,0:12:36.09:0,36,501	0/0:10,0:10:1.08:0,1,331	0/0:20,0:19:35.80:0,36,388	0/0:11,0:11:30.08:0,30,417	0/0:15,0:15:42.13:0,42,638	0/0:17,0:17:51.07:0,51,748	0/0:6,0:6:18.06:0,18,252	0/0:11,0:11:27.04:0,27,325	0/0:3,0:3:6.02:0,6,87	0/0:10,0:9:24.08:0,24,384	0/0:7,0:7:21.05:0,21,329	1/1:11,6:15:20.52:590,21,0	0/0:32,0:32:86.42:0,86,1208	0/0:28,0:25:69.01:0,69,877	0/0:16,0:16:46.39:0,46,701	0/0:7,0:7:21.05:0,21,297	0/0:3,0:3:9.02:0,9,127	0/0:9,0:8:24.07:0,24,372	0/0:4,0:4:12.03:0,12,177	0/0:9,0:9:27.04:0,27,336	0/0:22,0:22:65.21:0,65,860	0/0:19,0:19:48.13:0,48,669	0/0:6,0:6:14.86:0,15,172
chr10	664429	.	CA	C	4055.93	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=10.080;DP=601;FS=6.751;HRun=10;HaplotypeScore=61.6890;InbreedingCoeff=0.9553;MQ=77.58;MQ0=0;MQRankSum=-0.413;QD=21.46;ReadPosRankSum=1.693;VQSLOD=4.7276;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,43:51:99:1068,123,0	0/0:8,0:9:23.90:0,24,246	0/0:14,1:14:4.34:0,4,209	0/0:14,0:13:18.03:0,18,183	0/0:24,0:24:63.16:0,63,689	0/0:12,0:12:33.09:0,33,365	0/0:26,0:26:69.19:0,69,763	1/1:4,29:33:86.47:753,86,0	1/1:4,22:26:59.98:521,60,0	0/0:19,0:19:48.13:0,48,531	0/0:14,0:14:33.09:0,33,365	0/0:21,0:22:62.75:0,63,666	0/0:16,1:18:18.89:0,19,412	0/0:23,0:23:60.10:0,60,634	0/0:19,0:19:51.14:0,51,564	0/0:19,0:19:51.14:0,51,564	1/1:2,35:37:98.98:859,99,0	0/0:19,0:19:16.04:0,16,394	0/0:19,1:20:10.03:0,10,325	0/0:20,0:19:54.15:0,54,597	0/0:35,0:35:75.20:0,75,830	0/0:18,0:18:45.10:0,45,482	0/0:23,0:24:62.96:0,63,647	0/0:23,0:23:57.53:0,58,597	0/0:19,0:19:48.13:0,48,531	1/1:2,10:12:29.97:256,30,0	1/1:2,22:24:56.99:495,57,0	1/1:0,6:6:12:104,12,0
chr10	666261	.	TC	T	374.66	PASS	AB=0.994;AC=11;AF=0.196;AN=56;BaseQRankSum=1.455;DP=292;FS=18.215;HRun=10;HaplotypeScore=42.0004;InbreedingCoeff=0.4027;MQ=92.15;MQ0=9;MQRankSum=0.118;QD=3.50;ReadPosRankSum=0.963;VQSLOD=-0.5144;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:12:20.92:0,21,137	0/0:4,0:4:8.99:0,9,79	0/0:66,0:28:12.53:0,13,214	0/1:53,0:24:6.23:6,0,142	0/0:4,0:4:5.02:0,5,30	0/0:2,0:2:6.02:0,6,66	0/0:8,0:8:18.03:0,18,187	0/0:6,0:6:3.89:0,4,36	1/1:1,7:8:9:78,9,0	0/1:5,0:5:0.09:0,0,28	0/0:4,0:4:9.01:0,9,91	0/0:8,0:8:0.45:0,0,156	0/0:11,1:12:1.60:0,2,210	0/1:5,0:5:13.10:13,0,87	0/0:5,0:5:7.22:0,7,56	0/0:3,0:3:2.99:0,3,24	0/0:3,0:19:11.46:0,11,61	0/0:5,0:5:15.04:0,15,166	0/0:3,0:3:3.01:0,3,33	0/0:5,0:5:6:0,6,58	0/0:6,0:6:18.05:0,18,199	0/0:1,0:3:5.85:0,6,47	0/0:4,0:4:9.02:0,9,99	0/0:2,0:2:3.01:0,3,33	0/0:3,0:3:8.94:0,9,80	1/1:3,5:8:14.84:115,15,0	1/1:6,5:11:20.85:171,21,0	1/1:14,2:16:17.86:142,18,0
chr10	670240	.	CCG	C	1760.18	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.468;DP=363;FS=0.000;HRun=0;HaplotypeScore=43.1413;InbreedingCoeff=0.9244;MQ=58.96;MQ0=8;MQRankSum=3.323;QD=37.45;ReadPosRankSum=2.528;VQSLOD=5.5596;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,32:30:78.26:1193,78,0	0/0:7,0:7:21.07:0,21,403	0/0:8,0:6:8.17:0,8,184	0/0:7,0:6:18.04:0,18,312	0/0:21,0:19:48.16:0,48,921	0/0:16,0:15:45.15:0,45,865	0/0:23,0:23:69.24:0,69,1316	0/0:21,0:18:54.13:0,54,972	0/0:5,0:5:15.05:0,15,289	0/0:11,0:9:27.09:0,27,512	0/0:18,0:17:45.15:0,45,824	0/0:8,0:8:18.06:0,18,346	0/0:6,0:6:15.05:0,15,288	0/0:8,0:8:21.07:0,21,404	0/0:10,0:10:30.10:0,30,577	0/0:8,0:8:24.08:0,24,461	1/1:0,15:15:45.15:688,45,0	0/0:11,0:11:30.10:0,30,575	0/0:24,0:24:69.13:0,69,1254	0/0:15,0:15:39.05:0,39,673	0/0:8,0:8:18.06:0,18,346	0/0:11,0:9:24.08:0,24,460	0/0:10,0:9:23.92:0,24,376	0/0:16,0:16:45.15:0,45,847	0/0:10,0:10:27.04:0,27,459	0/0:14,0:13:39.05:0,39,664	0/0:13,0:13:35.96:0,36,691	0/0:7,0:7:15.52:0,16,290
chr10	670656	.	GT	G	1458.66	PASS	AB=0.818;AC=18;AF=0.321;AN=56;BaseQRankSum=8.060;DP=446;FS=21.243;HRun=12;HaplotypeScore=54.0056;InbreedingCoeff=0.5033;MQ=75.11;MQ0=2;MQRankSum=1.725;QD=6.23;ReadPosRankSum=-0.116;VQSLOD=0.3623;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,2:26:48.75:170,49,0	0/1:6,1:7:2:2,0,155	0/1:28,4:21:20.79:21,0,176	0/1:22,4:15:21.78:58,0,22	0/0:25,1:28:54.49:0,54,672	0/0:14,0:14:36.06:0,36,359	0/0:6,0:6:15.03:0,15,152	1/1:7,22:29:13.39:403,13,0	1/1:2,7:9:20.91:162,21,0	0/0:10,0:10:27.05:0,27,274	0/1:9,2:12:10.59:11,0,244	0/0:8,0:8:24.03:0,24,231	0/0:9,0:9:27.05:0,27,271	0/0:14,0:14:36.07:0,36,366	0/0:11,0:12:29.48:0,29,268	0/0:12,1:13:12.83:0,13,306	1/1:3,2:22:36.52:135,37,0	0/0:11,0:11:29.97:0,30,279	0/1:17,4:24:23.38:23,0,402	0/0:15,0:18:48.83:0,49,432	0/0:5,0:5:15.02:0,15,146	0/0:14,0:14:41.95:0,42,411	0/0:13,0:15:41.74:0,42,387	0/0:12,0:15:5.41:0,5,246	0/0:18,0:20:47.76:0,48,455	1/1:8,13:21:8.17:237,8,0	1/1:0,18:18:44.83:348,45,0	0/1:2,5:7:15.51:78,0,16
chr10	671441	.	TG	T	96.81	PASS	AB=0.767;AC=1;AF=0.018;AN=56;BaseQRankSum=5.459;DP=400;FS=0.000;HRun=2;HaplotypeScore=47.6230;InbreedingCoeff=-0.0211;MQ=91.83;MQ0=0;MQRankSum=3.409;QD=4.21;ReadPosRankSum=-2.644;VQSLOD=-0.5504;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:69.21:0,69,995	0/0:5,0:5:15.05:0,15,225	0/1:16,7:23:99:171,0,525	0/0:23,1:23:9.80:0,10,739	0/0:7,0:7:21.07:0,21,315	0/0:16,0:16:45.11:0,45,614	0/0:16,0:16:48.13:0,48,695	0/0:29,0:29:78.26:0,78,1169	0/0:9,0:9:27.08:0,27,384	0/0:10,0:10:30.08:0,30,413	0/0:7,0:7:21.05:0,21,294	0/0:12,0:12:36.12:0,36,540	0/0:16,0:16:45.15:0,45,674	0/0:13,0:13:39.13:0,39,581	0/0:10,0:10:27.09:0,27,401	0/0:12,0:12:36.12:0,36,539	0/0:19,0:19:57.19:0,57,854	0/0:12,0:12:36.10:0,36,509	0/0:21,0:21:60.19:0,60,856	0/0:11,0:11:30.08:0,30,425	0/0:20,0:20:53.73:0,54,660	0/0:10,0:10:30.10:0,30,449	0/0:16,0:16:45.15:0,45,673	0/0:15,0:15:42.14:0,42,629	0/0:12,0:11:33.10:0,33,477	0/0:7,0:7:21.07:0,21,315	0/0:13,0:12:30.10:0,30,449	0/0:9,0:9:27.09:0,27,405
chr10	671562	.	G	GATTT	328.40	PASS	AB=0.636;AC=1;AF=0.033;AN=30;BaseQRankSum=-3.991;DP=208;FS=0.000;HRun=0;HaplotypeScore=51.5721;InbreedingCoeff=-0.1022;MQ=59.53;MQ0=3;MQRankSum=1.157;QD=23.46;ReadPosRankSum=0.117;VQSLOD=2.5399;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:21.07:0,21,322	0/0:5,0:5:3.01:0,3,46	./.	./.	0/0:9,0:9:6.02:0,6,92	0/0:7,0:7:12.04:0,12,184	./.	./.	./.	0/0:9,0:9:6.02:0,6,92	0/0:3,0:3:6.02:0,6,84	0/0:8,0:8:9.02:0,9,120	0/0:5,0:5:9.03:0,9,138	0/0:4,0:4:3.01:0,3,46	./.	./.	0/1:6,8:14:23.94:399,0,24	0/0:21,0:21:27.09:0,27,411	0/0:12,0:11:9.03:0,9,138	./.	./.	./.	./.	./.	0/0:8,0:8:9.03:0,9,138	./.	0/0:3,0:9:12.01:0,12,112	0/0:6,0:12:18.02:0,18,168
chr10	673743	.	CT	C	1073.27	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.820;DP=714;FS=0.000;HRun=2;HaplotypeScore=68.1187;InbreedingCoeff=0.9998;MQ=80.34;MQ0=0;MQRankSum=-0.292;QD=35.78;ReadPosRankSum=2.596;VQSLOD=4.1449;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:93.30:0,93,1374	0/0:16,0:16:48.16:0,48,719	0/0:26,0:25:75.23:0,75,1057	0/0:16,0:16:42.07:0,42,566	0/0:33,0:33:99:0,99,1459	0/0:31,0:30:93.31:0,93,1392	0/0:19,0:19:57.19:0,57,854	0/0:39,0:39:99:0,111,1646	0/0:26,0:26:78.24:0,78,1125	0/0:35,0:35:99:0,105,1574	0/0:27,0:27:78.24:0,78,1130	0/0:21,0:21:63.21:0,63,943	0/0:33,0:33:99:0,99,1462	0/0:13,0:13:39.13:0,39,585	0/0:24,0:24:72.22:0,72,1042	0/0:19,0:19:57.19:0,57,854	1/1:0,30:30:90.29:1168,90,0	0/0:25,0:25:75.23:0,75,1093	0/0:24,0:24:69.23:0,69,1034	0/0:32,0:32:96.33:0,96,1438	0/0:24,0:24:72.23:0,72,1057	0/0:27,0:27:81.26:0,81,1189	0/0:20,0:20:60.20:0,60,899	0/0:28,0:28:84.27:0,84,1240	0/0:26,0:26:78.26:0,78,1168	0/0:25,0:25:75.24:0,75,1103	0/0:30,0:29:90.27:0,90,1288	0/0:13,0:13:36.12:0,36,539
chr10	675375	.	TA	T	1601.11	PASS	AB=0.568;AC=9;AF=0.161;AN=56;BaseQRankSum=8.971;DP=597;FS=5.991;HRun=10;HaplotypeScore=63.8529;InbreedingCoeff=0.8539;MQ=71.86;MQ0=7;MQRankSum=-2.136;QD=16.17;ReadPosRankSum=-1.829;VQSLOD=3.4327;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:86.80:0,87,920	0/0:14,0:14:33.07:0,33,349	0/0:57,0:17:14.59:0,15,105	0/0:48,0:22:21.79:0,22,190	0/0:29,0:29:69.15:0,69,742	0/0:21,0:21:48.13:0,48,529	0/0:9,0:9:24.05:0,24,256	1/1:5,27:32:77.91:662,78,0	1/1:3,14:17:26.99:234,27,0	0/0:16,0:16:39.10:0,39,424	0/0:25,0:25:41.88:0,42,574	0/0:17,0:17:45.09:0,45,478	0/0:21,0:21:57.13:0,57,613	0/0:19,0:19:48.04:0,48,483	0/0:10,0:10:30.08:0,30,331	0/0:10,0:10:30.05:0,30,313	0/0:25,0:25:69.16:0,69,745	0/0:24,0:26:51.52:0,52,554	0/0:32,0:32:66.13:0,66,707	0/0:33,0:33:85.20:0,85,956	0/0:7,0:7:21.06:0,21,231	0/0:2,0:2:3.01:0,3,33	0/0:17,0:17:48.10:0,48,506	0/0:10,0:10:18.05:0,18,198	0/0:19,0:19:51.12:0,51,548	0/1:5,16:21:4.97:350,0,5	1/1:1,13:14:26.98:234,27,0	1/1:3,12:15:32.99:286,33,0
chr10	675962	.	T	TG	3922.55	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=0.405;DP=577;FS=1.861;HRun=3;HaplotypeScore=61.4217;InbreedingCoeff=0.9989;MQ=76.30;MQ0=0;MQRankSum=-1.892;QD=37.72;ReadPosRankSum=0.687;VQSLOD=4.0871;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:36:95.46:0,95,1097	0/0:9,0:9:24.07:0,24,288	0/0:19,0:19:44.30:0,44,494	0/0:20,0:20:52.36:0,52,576	0/0:26,0:26:75.22:0,75,890	0/0:16,0:16:48.12:0,48,553	0/0:21,0:21:63.18:0,63,746	1/1:1,24:25:72.24:1006,72,0	1/1:1,18:19:45.15:629,45,0	0/0:13,0:13:39.12:0,39,468	0/0:21,0:21:51.11:0,51,596	0/0:22,0:22:63.16:0,63,732	0/0:24,0:24:69.21:0,69,822	0/0:28,0:28:84.26:0,84,1008	0/0:25,0:25:75.19:0,75,865	0/0:23,0:23:66.20:0,66,792	0/0:23,0:23:66.19:0,66,780	0/0:13,0:13:27.08:0,27,323	0/0:26,0:26:69.17:0,69,794	0/0:25,0:25:72.22:0,72,864	0/0:19,0:19:50.36:0,50,610	0/0:10,0:10:27.08:0,27,324	0/0:10,0:10:30.09:0,30,360	0/0:15,0:15:45.14:0,45,540	0/0:29,0:29:87.22:0,87,1007	1/1:2,25:27:75.25:1050,75,0	1/1:0,20:20:54.18:752,54,0	1/1:2,11:13:36.10:485,36,0
chr10	676452	.	CTGTGTGTGTG	C	1256.30	PASS	AB=0.879;AC=7;AF=0.125;AN=56;BaseQRankSum=3.707;DP=601;FS=3.593;HRun=0;HaplotypeScore=154.0429;InbreedingCoeff=0.6559;MQ=63.98;MQ0=35;MQRankSum=-3.627;QD=17.95;ReadPosRankSum=1.542;VQSLOD=2.9680;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:16.61:0,17,504	0/0:7,0:6:15.94:0,16,529	0/0:37,0:19:6.01:0,6,94	0/0:33,0:20:0:0,0,0	0/0:24,0:24:39.12:0,39,1347	0/0:23,0:23:35.91:0,36,1216	0/0:26,0:24:36.59:0,37,1327	0/0:34,0:26:9.01:0,9,159	1/1:6,1:8:6.84:254,7,0	0/0:17,0:16:21.06:0,21,650	0/0:15,0:15:20.35:0,20,718	0/0:14,0:14:18.06:0,18,641	0/0:18,0:18:27.26:0,27,763	0/0:20,0:20:39.12:0,39,1462	0/0:19,0:18:24.08:0,24,927	0/0:19,0:16:27.56:0,28,1079	0/0:24,0:20:21.89:0,22,520	0/0:18,0:15:21.07:0,21,642	0/0:19,0:15:17.41:0,17,438	0/0:18,0:16:22.01:0,22,827	0/0:32,0:30:18.53:0,19,643	0/0:15,0:13:15.05:0,15,584	0/0:25,0:24:36.12:0,36,1276	0/0:28,0:28:32.39:0,32,884	0/0:27,0:26:36.39:0,36,1502	0/1:25,1:27:99:592,0,110	1/1:7,12:22:18.19:519,18,0	1/1:5,6:10:2.97:20,3,0
chr10	676845	.	C	CT	2029.57	PASS	AB=0.579;AC=9;AF=0.161;AN=56;BaseQRankSum=-6.955;DP=509;FS=0.488;HRun=8;HaplotypeScore=51.2106;InbreedingCoeff=0.8484;MQ=86.92;MQ0=0;MQRankSum=-0.162;QD=26.02;ReadPosRankSum=-0.633;VQSLOD=3.9482;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:79.29:0,79,873	0/0:6,0:6:15.01:0,15,137	0/0:22,0:22:53.88:0,54,468	0/0:16,0:16:2.82:0,3,204	0/0:20,0:20:57.02:0,57,522	0/0:26,0:25:75.04:0,75,686	0/0:22,0:22:57.02:0,57,517	1/1:1,20:21:60.16:682,60,0	0/1:3,7:11:6.57:167,0,7	0/0:22,0:22:57.02:0,57,521	0/0:17,0:17:33:0,33,302	0/0:12,0:12:30.02:0,30,274	0/0:18,0:18:42.01:0,42,383	0/0:15,0:15:36.02:0,36,329	0/0:19,0:19:51.01:0,51,462	0/0:15,0:15:42.02:0,42,384	0/0:21,0:21:54.02:0,54,494	0/0:19,0:19:45.02:0,45,412	0/0:21,0:21:51.02:0,51,466	0/0:14,0:14:36.01:0,36,329	0/0:21,0:21:54:0,54,489	0/0:11,0:11:26.99:0,27,242	0/0:20,0:20:48.01:0,48,435	0/0:11,0:11:24.01:0,24,219	0/0:16,0:16:48.03:0,48,439	1/1:3,13:16:39.12:450,39,0	1/1:1,15:16:45.13:514,45,0	1/1:1,13:14:33.10:381,33,0
chr10	677048	.	C	CAA	1020.16	PASS	AB=0.914;AC=8;AF=0.143;AN=56;BaseQRankSum=3.272;DP=559;FS=5.578;HRun=14;HaplotypeScore=90.1429;InbreedingCoeff=0.6210;MQ=56.67;MQ0=10;MQRankSum=-3.170;QD=7.56;ReadPosRankSum=-2.001;VQSLOD=0.8982;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:24,10:36:29.15:329,29,0	0/0:8,0:9:14.65:0,15,112	0/0:11,0:6:0.64:0,1,53	0/0:10,0:7:12.78:0,13,72	0/0:28,0:28:34.66:0,35,273	0/0:21,0:21:38.22:0,38,300	0/0:14,0:14:15.83:0,16,234	0/1:19,0:23:21.56:22,0,54	1/1:3,10:14:23.56:277,24,0	0/0:24,0:26:44.32:0,44,362	0/0:17,0:17:38.54:0,39,312	0/0:20,0:20:33.91:0,34,268	0/0:20,0:20:25.89:0,26,223	0/0:9,0:11:17.56:0,18,157	0/0:13,0:13:23.81:0,24,200	0/0:14,0:16:38.34:0,38,299	1/1:13,18:31:44.35:527,44,0	0/0:25,0:23:20.65:0,21,255	0/1:24,0:27:18.39:18,0,195	0/0:17,0:17:32.83:0,33,274	0/0:19,0:16:26.75:0,27,226	0/0:18,0:20:28.31:0,28,255	0/0:24,0:27:26.39:0,26,316	0/0:19,0:17:32.95:0,33,276	0/0:17,0:18:35.57:0,36,281	0/0:28,0:30:41.20:0,41,374	0/0:18,0:20:29.39:0,29,237	0/0:5,0:6:5.70:0,6,37
chr10	677426	.	A	AACAC	9364.97	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-8.611;DP=805;FS=0.672;HRun=0;HaplotypeScore=127.0504;InbreedingCoeff=0.9762;MQ=68.60;MQ0=2;MQRankSum=-1.323;QD=40.72;ReadPosRankSum=0.871;VQSLOD=5.2142;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:12,0:35:26.91:180,27,0	0/0:9,0:9:21.07:0,21,356	0/0:30,0:31:52.85:0,53,880	0/0:18,0:17:5.06:0,5,225	0/0:38,0:38:99:0,105,1710	0/0:35,0:35:96.30:0,96,1576	0/0:18,0:18:45.13:0,45,707	1/1:10,26:39:93.02:1837,93,0	1/1:2,37:39:87.30:2184,87,0	0/0:38,0:38:93.31:0,93,1567	0/0:22,0:22:57.18:0,57,948	0/0:27,0:27:66.21:0,66,1102	0/0:32,0:32:75.23:0,75,1197	0/0:29,0:30:84.25:0,84,1343	0/0:32,0:32:87.30:0,87,1461	0/0:36,0:36:96.31:0,96,1599	1/1:2,0:25:47.56:214,48,0	0/0:21,0:21:57.16:0,57,895	0/0:21,0:21:30.08:0,30,439	0/0:28,0:29:81.27:0,81,1351	0/0:34,0:34:72.25:0,72,1207	0/0:24,0:24:60.18:0,60,969	0/0:29,0:29:75.25:0,75,1259	0/0:26,0:26:66.23:0,66,1122	0/0:25,0:25:66.17:0,66,1092	1/1:6,31:38:99:2379,105,0	1/1:5,31:37:81.07:1968,81,0	1/1:3,10:14:24.08:603,24,0
chr10	682067	.	TA	T	2682.48	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=5.330;DP=294;FS=3.160;HRun=1;HaplotypeScore=44.2003;InbreedingCoeff=0.7905;MQ=75.29;MQ0=1;MQRankSum=-3.476;QD=32.71;ReadPosRankSum=-1.124;VQSLOD=2.9401;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:66.14:0,66,1019	0/0:1,0:1:3.01:0,3,48	0/1:10,0:10:13.85:14,0,311	0/0:19,0:18:42.04:0,42,608	0/0:7,0:7:21.07:0,21,335	0/0:7,0:7:21.07:0,21,333	0/0:9,0:9:27.09:0,27,420	1/1:0,18:18:51.13:663,51,0	1/1:1,20:21:63.18:859,63,0	0/0:5,0:5:15.05:0,15,240	0/0:9,0:9:27.09:0,27,427	0/0:14,0:14:39.13:0,39,622	0/0:9,0:9:27.09:0,27,426	0/0:8,0:8:24.08:0,24,383	0/0:11,0:11:33.11:0,33,526	0/0:6,0:6:18.06:0,18,288	0/0:26,0:26:60.17:0,60,905	0/0:11,0:11:33.11:0,33,522	0/0:10,0:10:30.10:0,30,460	0/0:3,0:3:9.02:0,9,121	0/0:12,0:12:36.11:0,36,551	0/0:7,0:7:21.07:0,21,335	0/0:3,0:3:9.03:0,9,142	0/0:8,0:8:21.07:0,21,336	0/0:3,0:3:9.03:0,9,143	1/1:1,14:15:45.15:629,45,0	1/1:3,12:15:45.14:606,45,0	1/1:0,2:2:6.02:84,6,0
chr10	682109	.	TCCCC	T	3088.55	PASS	AC=14;AF=0.259;AN=54;BaseQRankSum=2.700;DP=326;FS=11.312;HRun=11;HaplotypeScore=81.8881;InbreedingCoeff=0.7736;MQ=69.18;MQ0=2;MQRankSum=-1.759;QD=21.15;ReadPosRankSum=3.473;VQSLOD=0.7807;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:28:4.32:120,4,0	0/0:2,0:2:3.01:0,3,62	0/0:25,0:16:22.60:0,23,357	0/0:28,0:18:29.10:0,29,365	0/0:5,0:5:5.60:0,6,149	0/0:5,0:6:10.30:0,10,119	0/0:10,0:11:27.04:0,27,446	1/1:14,10:24:60.07:782,60,0	1/1:5,17:22:60.14:856,60,0	0/0:4,0:4:8.93:0,9,64	0/0:8,0:8:9:0,9,132	0/0:6,0:7:15.05:0,15,317	0/0:11,0:11:28.34:0,28,499	0/0:10,0:11:20.49:0,20,237	0/0:12,0:11:27.05:0,27,451	0/0:4,0:4:9.02:0,9,130	1/1:35,0:35:33.04:150,33,0	0/0:7,0:8:15.05:0,15,294	0/0:6,0:6:8.62:0,9,128	0/0:1,0:2:2.74:0,3,12	0/0:11,0:11:15:0,15,164	0/0:4,0:4:8.85:0,9,91	0/0:3,0:4:5.98:0,6,95	0/0:8,0:8:14.98:0,15,214	./.	1/1:3,18:21:54.17:822,54,0	1/1:4,10:14:36.03:492,36,0	1/1:1,1:2:3.01:47,3,0
chr10	682116	.	C	CA	802.52	PASS	AB=0.919;AC=11;AF=0.196;AN=56;BaseQRankSum=1.697;DP=319;FS=2.651;HRun=0;HaplotypeScore=69.0436;InbreedingCoeff=0.2638;MQ=73.73;MQ0=1;MQRankSum=0.380;QD=5.25;ReadPosRankSum=3.132;VQSLOD=3.3464;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:28:18.44:184,18,0	0/0:2,0:2:6.01:0,6,60	0/0:29,0:17:29.34:0,29,293	0/0:28,0:17:37.85:0,38,315	0/0:4,0:4:9.01:0,9,109	0/0:6,0:6:11.10:0,11,82	0/0:14,0:14:32.99:0,33,339	0/1:19,4:23:28.59:274,0,29	0/1:20,2:22:99:132,0,127	0/0:3,0:3:8.93:0,9,64	0/0:4,0:4:8.99:0,9,92	0/0:7,0:7:14.99:0,15,172	0/0:11,0:11:25.24:0,25,252	0/1:10,0:10:19.92:20,0,81	0/0:10,0:9:25.25:0,25,251	0/0:4,0:4:9.89:0,10,94	1/1:35,0:35:45.97:215,46,0	0/0:7,0:7:14.98:0,15,160	0/0:4,0:4:7.82:0,8,70	1/1:1,0:1:2.37:8,2,0	0/0:13,0:13:17.01:0,17,141	0/0:4,0:4:11.85:0,12,101	0/0:4,0:4:5.98:0,6,62	0/0:9,0:9:23.93:0,24,223	0/0:2,0:2:6:0,6,54	0/1:19,1:20:57.99:58,0,105	0/1:12,2:14:63.68:64,0,96	0/0:1,0:1:2.68:0,3,11
chr10	682119	.	CCA	C	1821.73	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=3.121;DP=329;FS=8.934;HRun=0;HaplotypeScore=69.6637;InbreedingCoeff=-0.0341;MQ=73.80;MQ0=1;MQRankSum=-4.164;QD=7.72;ReadPosRankSum=6.020;VQSLOD=1.9493;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:3,26:29:63.10:802,63,0	0/0:3,0:3:8.49:0,8,58	0/0:29,0:17:10.74:0,11,301	0/1:31,0:20:20.03:20,0,199	0/0:4,0:4:8.61:0,9,98	0/0:6,0:6:7.49:0,7,59	0/0:15,0:15:34.10:0,34,301	0/1:23,0:23:17.99:18,0,113	0/1:22,0:22:10.43:10,0,39	0/1:3,0:3:0:0,0,0	0/0:3,0:3:2.17:0,2,30	0/0:7,0:7:15.71:0,16,181	0/1:12,0:12:9.93:10,0,150	0/1:12,0:12:6.04:6,0,70	0/1:9,0:8:13.27:13,0,132	0/1:5,0:5:34.03:34,0,82	1/1:1,36:37:69.23:944,69,0	0/0:7,0:7:16.06:0,16,143	0/1:4,0:4:5.33:5,0,45	0/0:1,0:1:1.25:0,1,3	0/1:13,0:13:25.15:25,0,38	0/0:3,0:3:8.90:0,9,65	0/0:4,0:4:2.72:0,3,37	0/0:8,0:8:16.42:0,16,117	0/0:3,0:3:7.81:0,8,54	0/1:21,0:21:47.36:59,0,47	0/1:14,0:14:26.42:26,0,37	0/1:1,0:1:0:0,0,0
chr10	682120	.	CA	C	1145.38	PASS	AB=0.980;AC=19;AF=0.339;AN=56;BaseQRankSum=0.762;DP=335;FS=1.120;HRun=1;HaplotypeScore=70.7611;InbreedingCoeff=-0.1791;MQ=73.76;MQ0=1;MQRankSum=0.166;QD=4.79;ReadPosRankSum=1.866;VQSLOD=0.5711;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:28:62.48:443,62,0	0/0:3,0:3:7.24:0,7,53	0/0:29,0:17:5.98:0,6,255	0/1:26,5:20:58.70:59,0,165	0/0:3,1:4:8.47:0,8,69	0/1:7,0:7:11.40:11,0,55	0/0:15,0:15:24.22:0,24,229	0/1:23,0:23:13.91:14,0,157	0/0:21,0:21:21.82:0,22,100	0/1:2,0:2:0:0,0,0	0/1:3,0:3:3.92:20,0,4	0/1:8,0:8:12.69:13,0,115	0/1:13,0:13:67.40:67,0,100	0/1:12,0:12:13.42:13,0,44	0/1:10,0:9:43.34:43,0,91	0/1:9,0:9:27.63:28,0,109	1/1:36,1:37:68.61:503,69,0	0/0:7,0:7:7.96:0,8,93	0/1:4,1:5:35.11:35,0,55	0/0:1,0:1:2.37:0,2,8	0/1:13,0:13:25.06:25,0,56	0/0:3,0:3:8.79:0,9,63	0/0:4,0:4:2.57:0,3,23	0/0:8,0:8:0.19:0,0,78	0/1:3,0:3:6.97:7,0,40	0/1:21,0:21:13.04:13,0,95	0/1:14,0:14:3.39:3,0,62	0/0:1,0:1:2.04:0,2,6
chr10	685414	.	GA	G	2031.50	PASS	AB=0.839;AC=19;AF=0.339;AN=56;BaseQRankSum=7.477;DP=531;FS=0.000;HRun=13;HaplotypeScore=59.5838;InbreedingCoeff=0.3868;MQ=54.05;MQ0=11;MQRankSum=0.851;QD=7.67;ReadPosRankSum=3.821;VQSLOD=2.3220;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,30:37:47.42:502,47,0	0/0:12,1:13:8.12:0,8,226	0/1:11,1:4:11.52:12,0,28	0/1:6,1:5:8.57:9,0,23	0/1:17,3:20:29.73:30,0,204	0/0:22,1:23:36.73:0,37,503	0/0:16,2:19:1.04:0,1,310	1/1:11,15:27:43.03:311,43,0	1/1:3,13:17:34.84:247,35,0	0/0:23,0:21:36.05:0,36,347	0/1:14,3:18:7.42:7,0,226	0/0:16,1:16:17.01:0,17,296	0/0:22,0:23:44.21:0,44,450	0/1:20,3:23:23.67:24,0,274	0/0:13,1:14:5.13:0,5,212	0/0:11,1:12:5.09:0,5,202	0/1:11,25:33:12.86:401,0,13	0/0:22,1:24:19.74:0,20,411	0/0:19,1:19:19.98:0,20,325	0/0:10,0:10:24.04:0,24,234	0/0:14,1:14:27.02:0,27,252	0/0:13,1:15:11.08:0,11,255	0/0:18,1:18:17.07:0,17,314	0/0:17,1:18:20.16:0,20,358	0/1:10,1:12:15.91:16,0,196	1/1:5,15:20:44.70:327,45,0	1/1:7,15:23:13.66:245,14,0	1/1:6,2:9:13.88:90,14,0
chr10	688368	.	C	CATGTATGT	2392.25	PASS	AB=0.801;AC=10;AF=0.185;AN=54;BaseQRankSum=0.935;DP=837;FS=4.449;HRun=0;HaplotypeScore=196.3229;InbreedingCoeff=0.6875;MQ=58.82;MQ0=2;MQRankSum=-3.282;QD=11.28;ReadPosRankSum=-2.297;VQSLOD=2.2323;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:48:30.16:30,0,35	0/0:15,0:15:30.08:0,30,636	./.	0/0:19,0:16:3:0,3,26	0/0:35,0:35:45.62:0,46,1284	0/0:22,0:22:42.12:0,42,913	0/0:28,0:28:42.08:0,42,698	1/1:44,0:44:29.80:232,30,0	1/1:12,0:30:26.89:214,27,0	0/0:35,0:36:87.26:0,87,1735	0/0:29,0:29:57.15:0,57,1120	0/0:32,0:33:60.19:0,60,1299	0/0:30,0:30:45.13:0,45,997	0/0:31,0:31:75.19:0,75,1536	0/0:40,0:40:75.20:0,75,1497	0/0:24,0:24:48.14:0,48,974	0/0:15,0:25:9.03:0,9,152	0/0:27,0:29:48.14:0,48,1027	0/0:17,0:17:9.92:0,10,227	0/0:28,0:29:63.16:0,63,1247	0/0:33,0:33:57.10:0,57,1116	0/0:26,0:26:30.05:0,30,539	0/0:35,0:35:57.08:0,57,1094	0/0:27,0:26:42.13:0,42,900	0/0:33,0:33:48.15:0,48,1073	0/1:15,20:38:38.44:1353,0,38	1/1:11,23:35:14.70:528,15,0	1/1:15,0:15:11.99:199,12,0
chr10	690344	.	ATCTT	A	1019.47	PASS	AB=0.894;AC=7;AF=0.125;AN=56;BaseQRankSum=8.554;DP=622;FS=4.116;HRun=0;HaplotypeScore=128.2057;InbreedingCoeff=-0.1444;MQ=54.55;MQ0=4;MQRankSum=-5.026;QD=4.81;ReadPosRankSum=-0.154;VQSLOD=2.5264;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:33,1:34:64.60:65,0,261	0/0:10,0:10:30.09:0,30,691	0/0:15,0:5:15.04:0,15,205	0/0:10,0:6:15.01:0,15,200	0/0:23,0:23:63.16:0,63,1061	0/0:25,0:25:72.17:0,72,1277	0/0:14,0:14:42.10:0,42,801	0/1:52,0:47:99:208,0,239	0/1:25,1:25:99:183,0,266	0/0:33,0:33:93.31:0,93,1983	0/0:22,0:22:57.17:0,57,1165	0/0:14,0:14:42.12:0,42,746	0/0:25,0:25:72.20:0,72,1361	0/0:23,0:23:69.17:0,69,1408	0/0:25,0:25:72.19:0,72,1374	0/0:21,0:21:38.18:0,38,1088	0/1:20,0:19:41.29:41,0,95	0/0:13,0:13:33:0,33,559	0/0:23,0:19:36.06:0,36,680	0/0:24,0:24:72.21:0,72,1373	0/0:18,0:18:45.10:0,45,850	0/0:19,0:19:57.17:0,57,1133	0/0:8,0:8:24.08:0,24,583	0/0:15,0:15:45.13:0,45,796	0/0:30,0:30:84.24:0,84,1571	0/1:19,7:26:99:179,0,623	0/1:27,13:40:99:235,0,679	0/1:10,4:14:99:240,0,212
chr10	692324	.	C	CTCCTTCCTTCCTTCCT	1405.77	PASS	AB=0.867;AC=5;AF=0.089;AN=56;BaseQRankSum=0.902;DP=742;FS=9.091;HRun=0;HaplotypeScore=299.2704;InbreedingCoeff=0.3031;MQ=63.53;MQ0=7;MQRankSum=-6.234;QD=10.57;ReadPosRankSum=-5.148;VQSLOD=0.4210;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:17,0:35:60.53:61,0,651	0/0:10,0:10:26.83:0,27,818	0/0:25,0:19:12.04:0,12,192	0/0:23,0:15:8.97:0,9,147	0/0:32,0:31:69.18:0,69,2148	0/0:33,0:33:54.18:0,54,2030	0/0:23,0:22:9.19:0,9,828	1/1:35,0:35:48.11:979,48,0	0/1:14,19:42:86.23:444,0,86	0/0:25,0:25:57.19:0,57,1969	0/0:24,0:24:54.19:0,54,2037	0/0:35,0:35:78.23:0,78,2870	0/0:33,0:33:57.17:0,57,1886	0/0:25,0:25:54.15:0,54,1738	0/0:27,0:27:60.19:0,60,2123	0/0:23,0:23:39.08:0,39,1186	0/1:11,0:21:45.72:46,0,72	0/0:17,0:17:24.08:0,24,869	0/0:19,0:19:9.03:0,9,299	0/0:28,0:28:63.22:0,63,2080	0/0:29,0:29:54.17:0,54,1702	0/0:28,0:28:51.17:0,51,1960	0/0:20,0:20:39.13:0,39,1461	0/0:25,0:24:30.10:0,30,1193	0/0:18,0:18:48.12:0,48,1788	0/0:28,0:28:51.17:0,51,1965	0/0:41,0:41:99:0,99,3987	0/0:18,0:18:24.08:0,24,1006
chr10	693048	.	C	CT	892.52	PASS	AB=0.909;AC=5;AF=0.089;AN=56;BaseQRankSum=-2.902;DP=488;FS=0.655;HRun=11;HaplotypeScore=49.7966;InbreedingCoeff=0.7027;MQ=62.30;MQ0=41;MQRankSum=0.838;QD=13.52;ReadPosRankSum=1.056;VQSLOD=3.3998;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,18:23:45.08:451,45,0	0/0:10,0:10:23.87:0,24,181	0/0:12,0:12:20.99:0,21,127	0/0:9,0:9:9.88:0,10,58	0/0:16,0:15:35.33:0,35,277	0/0:25,0:24:62.66:0,63,481	0/0:16,0:15:34.90:0,35,261	0/0:26,0:19:41.80:0,42,325	0/0:18,1:16:8.43:0,8,247	0/0:22,0:21:47.76:0,48,369	0/0:19,0:20:34.87:0,35,261	0/0:14,0:14:38.85:0,39,302	0/0:23,0:20:53.79:0,54,418	0/0:15,0:16:31.89:0,32,237	0/0:25,0:22:56.75:0,57,441	0/0:18,0:16:41.82:0,42,325	1/1:9,19:25:37.69:557,38,0	0/0:16,0:14:35.83:0,36,278	0/0:13,0:13:32.85:0,33,254	0/0:7,0:6:17.93:0,18,139	0/0:5,0:4:8.96:0,9,69	0/0:8,0:8:20.89:0,21,160	0/1:9,1:10:12.62:13,0,98	0/0:9,0:8:14.53:0,15,115	0/0:19,0:18:47.79:0,48,371	0/0:33,0:31:65.61:0,66,500	0/0:31,0:28:77.46:0,77,586	0/0:6,0:6:8.90:0,9,64
chr10	695341	.	T	TTGTG	1967.74	PASS	AB=0.920;AC=30;AF=0.556;AN=54;BaseQRankSum=-4.689;DP=585;FS=8.437;HRun=0;HaplotypeScore=154.2113;InbreedingCoeff=0.1565;MQ=54.29;MQ0=11;MQRankSum=0.598;QD=4.31;ReadPosRankSum=-1.497;VQSLOD=1.7270;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:24:26.82:0,27,322	1/1:4,0:3:6.02:84,6,0	0/1:18,0:9:0:0,0,0	./.	0/1:25,0:37:0:1,0,0	0/1:12,0:13:24.55:27,0,25	0/1:22,0:22:50.51:202,0,51	0/1:22,0:25:0.45:0,0,3	0/0:20,0:20:30.03:0,30,359	0/1:25,0:30:37.34:37,0,57	0/1:17,0:17:10.27:10,0,79	1/1:14,0:22:10.83:86,11,0	1/1:16,0:23:5.65:51,6,0	1/1:11,0:12:11.84:114,12,0	1/1:15,1:27:0.47:2,0,0	1/1:21,0:26:18.47:235,18,0	0/0:14,0:15:17.93:0,18,171	0/1:14,0:15:56.04:136,0,56	0/1:29,0:28:18:142,0,18	0/1:19,0:19:28.11:127,0,28	0/1:10,0:22:8.02:28,0,8	0/1:22,0:21:22.26:232,0,22	1/1:13,0:18:8.98:84,9,0	1/1:31,0:32:33.09:530,33,0	1/1:10,0:16:0.47:1,0,0	0/0:22,0:21:15.44:0,15,153	0/0:10,0:19:21.04:0,21,217	0/0:8,0:9:9.02:0,9,105
chr10	695399	.	G	GACAGACAGAC	1323.53	PASS	AB=0.928;AC=6;AF=0.115;AN=52;BaseQRankSum=0.806;DP=612;FS=37.704;HRun=0;HaplotypeScore=229.2394;InbreedingCoeff=0.1909;MQ=47.11;MQ0=17;MQRankSum=-5.840;QD=9.45;ReadPosRankSum=-2.513;VQSLOD=1.3277;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:27:43.44:0,43,918	0/0:10,0:9:14.77:0,15,364	./.	./.	0/0:21,0:20:24.08:0,24,608	0/0:18,0:18:28.96:0,29,521	0/0:29,0:29:18.94:0,19,695	0/1:38,0:36:99:204,0,267	0/1:28,0:25:29.59:30,0,105	0/0:26,0:25:59.77:0,60,995	0/0:20,0:19:31.88:0,32,660	0/0:21,0:21:32.18:0,32,748	0/0:24,0:24:40.51:0,41,996	0/0:24,0:23:36.71:0,37,914	0/0:20,0:19:8.83:0,9,231	0/0:25,0:25:26.57:0,27,629	0/0:22,0:19:3.71:0,4,745	0/0:22,0:21:10.65:0,11,705	0/0:17,0:17:10.82:0,11,561	0/0:23,0:21:35.85:0,36,887	0/0:20,0:18:30.05:0,30,620	0/0:29,0:28:50.01:0,50,890	0/0:22,0:21:32.44:0,32,622	0/0:35,0:34:54.75:0,55,922	0/0:12,0:11:18.02:0,18,302	0/1:26,0:25:52.29:581,0,52	0/1:22,13:35:47.68:447,0,48	1/1:11,0:10:15.28:189,15,0
chr10	695401	.	GAC	G	737.14	PASS	AB=0.983;AC=19;AF=0.365;AN=52;BaseQRankSum=7.299;DP=595;FS=7.865;HRun=0;HaplotypeScore=138.5306;InbreedingCoeff=-0.1812;MQ=47.25;MQ0=16;MQRankSum=1.770;QD=1.89;ReadPosRankSum=-0.152;VQSLOD=1.9584;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:24:19.27:148,19,0	0/1:8,1:8:12.23:12,0,16	./.	./.	0/0:20,0:19:8.01:0,8,90	0/1:19,0:19:2.05:2,0,160	0/0:29,0:29:19.27:0,19,134	0/0:40,0:38:84.25:0,84,620	0/1:25,0:22:66.75:67,0,155	0/0:24,0:23:23.38:0,23,474	0/0:14,4:17:12.84:0,13,274	0/1:19,0:19:5.57:6,0,107	0/1:23,0:23:10.91:11,0,178	0/1:24,0:23:31.29:31,0,145	0/0:19,0:18:5.85:0,6,48	0/1:23,0:23:4.50:5,0,107	1/1:21,1:19:44.83:464,45,0	0/1:23,0:22:12.33:12,0,235	0/1:16,1:17:23.08:23,0,149	0/1:21,1:20:8.18:8,0,64	0/1:18,0:16:0.26:0,0,115	0/0:29,0:28:3.11:0,3,152	0/1:22,0:21:10.35:10,0,163	0/1:32,2:33:57.57:58,0,114	0/0:10,0:10:16.23:0,16,128	0/1:27,0:26:7.43:7,0,458	0/1:36,0:35:24.61:25,0,60	0/0:11,0:10:16.53:0,17,131
chr10	695438	.	A	ACAGACAGACAGA	2240.87	PASS	AB=1.000;AC=9;AF=0.173;AN=52;BaseQRankSum=-2.559;DP=580;FS=34.774;HRun=0;HaplotypeScore=198.8513;InbreedingCoeff=0.8365;MQ=68.30;MQ0=3;MQRankSum=-5.905;QD=17.24;ReadPosRankSum=-3.898;VQSLOD=0.8116;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:33.11:0,33,860	0/0:10,0:9:15.05:0,15,442	./.	./.	0/0:14,0:14:24.08:0,24,675	0/0:18,0:18:21.05:0,21,533	0/0:25,0:25:32.90:0,33,869	1/1:41,0:41:22.20:210,22,0	0/1:18,0:18:30.88:31,0,33	0/0:15,0:15:30.09:0,30,786	0/0:20,0:20:27.06:0,27,644	0/0:23,0:23:33.10:0,33,880	0/0:22,0:22:42.14:0,42,1119	0/0:22,0:22:39.11:0,39,1038	0/0:12,0:11:9.03:0,9,273	0/0:18,0:18:27.09:0,27,690	0/0:20,0:20:33.07:0,33,779	0/0:19,0:19:33.06:0,33,755	0/0:19,0:19:21.07:0,21,614	0/0:18,0:18:36.12:0,36,1116	0/0:24,0:23:27.08:0,27,678	0/0:20,0:20:33.11:0,33,911	0/0:17,0:17:30.08:0,30,653	0/0:24,0:24:39.08:0,39,1022	0/0:17,0:17:18.02:0,18,318	1/1:13,5:25:42.06:1314,42,0	1/1:30,0:29:14.92:644,15,0	1/1:15,0:15:20.75:201,21,0
chr10	698573	.	T	TA	2282.92	PASS	AB=0.878;AC=16;AF=0.286;AN=56;BaseQRankSum=-6.483;DP=576;FS=16.814;HRun=12;HaplotypeScore=69.6011;InbreedingCoeff=0.6559;MQ=75.52;MQ0=0;MQRankSum=-0.678;QD=10.62;ReadPosRankSum=-2.437;VQSLOD=0.7523;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,21:33:28.91:416,29,0	0/1:9,1:10:8.35:8,0,107	0/0:17,0:18:30.11:0,30,190	0/1:9,0:10:4.93:5,0,18	0/1:25,3:29:13.95:14,0,390	0/0:18,0:18:44.70:0,45,328	0/0:31,0:34:89.60:0,90,627	1/1:9,20:29:57.08:549,57,0	1/1:3,19:23:42.20:425,42,0	0/0:23,0:25:25.75:0,26,302	0/0:20,0:20:16.92:0,17,258	0/0:17,0:17:26.75:0,27,197	0/0:27,0:27:62.36:0,62,446	0/0:15,0:17:39.10:0,39,268	0/0:19,0:19:47.57:0,48,340	0/0:16,0:16:35.74:0,36,261	1/1:9,20:29:10.25:416,10,0	0/0:14,0:14:32.76:0,33,238	0/0:15,0:15:32.54:0,33,229	0/0:18,0:18:35.68:0,36,258	0/0:19,3:23:11.50:0,12,239	0/0:14,0:15:28.85:0,29,203	0/0:24,0:24:31.10:0,31,328	0/0:16,0:17:43.73:0,44,310	0/0:20,1:23:21.36:0,21,293	0/1:13,10:23:47.32:224,0,47	1/1:5,14:19:15.03:298,15,0	1/1:4,6:10:12.02:117,12,0
chr10	698708	.	CT	C	1725.54	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=6.387;DP=572;FS=3.034;HRun=12;HaplotypeScore=69.0716;InbreedingCoeff=0.9498;MQ=68.32;MQ0=2;MQRankSum=0.071;QD=15.41;ReadPosRankSum=-0.712;VQSLOD=4.3555;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:37:63.46:0,63,363	0/0:12,0:13:24.73:0,25,263	0/0:13,0:11:18:0,18,174	0/0:10,0:5:3.28:0,3,51	0/0:16,0:17:15.75:0,16,321	0/0:24,1:25:32.62:0,33,486	0/0:21,0:21:51.10:0,51,518	1/1:4,25:32:53.34:565,53,0	1/1:3,16:20:19.40:322,19,0	0/0:24,0:25:54.14:0,54,508	0/0:16,0:17:35.18:0,35,370	0/0:13,0:14:36.69:0,37,336	0/0:21,1:22:21.84:0,22,389	0/0:20,0:21:53.94:0,54,532	0/0:25,0:25:59.93:0,60,580	0/0:17,0:17:36.06:0,36,360	0/0:3,0:22:51.30:0,51,273	0/0:17,0:17:33.21:0,33,317	0/0:21,0:21:51.03:0,51,494	0/0:17,1:18:18.84:0,19,367	0/0:27,0:28:74.91:0,75,727	0/0:19,1:22:27.70:0,28,443	0/0:18,0:20:44.70:0,45,412	0/0:15,1:16:18.82:0,19,358	0/0:16,1:19:27.68:0,28,437	1/1:6,20:27:36.16:445,36,0	1/1:6,17:24:54.86:406,55,0	1/1:1,8:9:19.72:160,20,0
chr10	702622	.	GA	G	270.81	PASS	AB=0.817;AC=2;AF=0.036;AN=56;BaseQRankSum=6.977;DP=632;FS=0.935;HRun=1;HaplotypeScore=72.7889;InbreedingCoeff=-0.0372;MQ=91.63;MQ0=0;MQRankSum=6.806;QD=4.30;ReadPosRankSum=-2.394;VQSLOD=-0.6565;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,135,2072	0/0:11,0:11:33.11:0,33,527	0/1:20,9:29:99:274,0,792	0/1:29,5:32:86.16:86,0,861	0/0:22,0:22:66.23:0,66,1051	0/0:25,0:25:75.22:0,75,1128	0/0:26,0:26:75.22:0,75,1150	0/0:28,0:28:84.25:0,84,1258	0/0:24,0:24:72.23:0,72,1127	0/0:19,0:19:57.19:0,57,907	0/0:15,0:15:45.14:0,45,694	0/0:23,0:23:69.13:0,69,1002	0/0:27,0:27:81.25:0,81,1257	0/0:14,0:14:42.14:0,42,669	0/0:23,0:23:66.20:0,66,1008	0/0:13,0:13:39.12:0,39,590	0/0:34,0:34:99:0,102,1550	0/0:15,0:15:42.12:0,42,618	0/0:29,0:29:87.24:0,87,1291	0/0:23,0:23:69.21:0,69,1049	0/0:19,0:19:57.19:0,57,909	0/0:17,0:17:48.15:0,48,741	0/0:18,0:18:54.17:0,54,839	0/0:22,0:22:66.21:0,66,1029	0/0:20,0:20:60.15:0,60,904	0/0:27,0:27:81.28:0,81,1293	0/0:20,0:20:60.19:0,60,934	0/0:9,0:9:21.07:0,21,335
chr10	703474	.	A	AAAC	5910.31	PASS	AB=0.733;AC=14;AF=0.250;AN=56;BaseQRankSum=-10.219;DP=445;FS=4.051;HRun=0;HaplotypeScore=62.2925;InbreedingCoeff=0.8098;MQ=102.90;MQ0=1;MQRankSum=-7.455;QD=43.14;ReadPosRankSum=-0.729;VQSLOD=5.4068;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,20:22:45.15:999,45,0	0/0:8,0:8:24.08:0,24,392	0/0:24,0:22:51.11:0,51,788	0/0:38,0:37:94.53:0,95,1495	0/0:14,0:14:39.12:0,39,613	0/0:7,0:7:21.07:0,21,343	0/0:14,0:14:39.13:0,39,621	1/1:6,26:34:67.30:1794,67,0	1/1:1,11:13:33.11:723,33,0	0/0:18,0:18:48.16:0,48,776	0/0:10,0:10:27.03:0,27,441	0/0:9,0:9:27.09:0,27,441	0/0:19,0:19:54.18:0,54,875	0/0:13,0:13:39.12:0,39,613	0/0:15,0:15:45.15:0,45,735	0/1:16,1:18:18.88:19,0,687	1/1:1,17:18:27.09:602,27,0	0/0:7,0:7:15.05:0,15,245	0/0:14,0:14:33.11:0,33,521	0/0:18,0:18:51.17:0,51,826	0/0:21,0:21:60.19:0,60,940	0/0:11,0:11:33.11:0,33,531	0/0:13,0:13:39.12:0,39,613	0/0:18,0:18:54.18:0,54,874	0/0:17,0:17:45.14:0,45,698	0/1:3,10:13:9.88:702,0,10	1/1:0,14:14:36.12:804,36,0	1/1:0,5:5:12.04:267,12,0
chr10	707507	.	CT	C	2563.83	PASS	AB=0.740;AC=15;AF=0.268;AN=56;BaseQRankSum=1.909;DP=683;FS=7.661;HRun=14;HaplotypeScore=81.2697;InbreedingCoeff=0.6312;MQ=64.41;MQ0=5;MQRankSum=1.326;QD=10.59;ReadPosRankSum=2.896;VQSLOD=3.1589;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:10,35:45:99:756,108,0	0/0:8,0:9:23.86:0,24,209	0/0:21,0:8:14.47:0,14,88	0/0:23,0:11:2.60:0,3,53	0/0:30,2:33:12.71:0,13,461	0/1:11,5:17:21.99:22,0,226	0/0:29,2:33:19.57:0,20,514	1/1:11,25:38:70.77:463,71,0	1/1:14,11:25:37.78:252,38,0	0/0:25,1:25:22.04:0,22,295	0/0:23,1:25:24.28:0,24,347	0/0:21,0:21:42.41:0,42,378	0/0:19,0:19:32.63:0,33,261	0/0:28,0:28:10:0,10,377	0/0:32,0:32:69.52:0,70,630	0/0:26,1:28:9.91:0,10,302	1/1:10,26:37:45.39:441,45,0	0/0:12,0:12:29.25:0,29,234	0/0:24,1:24:1.49:0,1,277	0/0:31,0:31:64.07:0,64,591	0/1:11,3:14:32.14:32,0,133	0/0:22,0:22:45.54:0,46,450	0/0:15,1:17:12.30:0,12,244	0/0:15,0:18:38.53:0,39,314	0/0:14,1:16:2.61:0,3,190	0/1:10,15:25:7.16:239,0,7	1/1:15,13:28:48.30:382,48,0	1/1:0,13:13:23.78:164,24,0
chr10	717805	.	G	GATC	6741.71	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-13.041;DP=711;FS=6.084;HRun=0;HaplotypeScore=91.5102;InbreedingCoeff=0.9913;MQ=67.90;MQ0=5;MQRankSum=3.204;QD=32.41;ReadPosRankSum=-1.155;VQSLOD=4.7042;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:13,43:57:87.30:1768,87,0	0/0:11,0:11:21.05:0,21,281	0/0:32,0:22:18.85:0,19,302	0/0:52,0:38:50.54:0,51,593	0/0:16,0:16:39.09:0,39,504	0/0:32,0:33:75.15:0,75,976	0/0:20,0:20:39.04:0,39,483	1/1:20,20:41:72.10:1052,72,0	1/1:3,12:15:27.09:549,27,0	0/0:27,0:28:75.18:0,75,975	0/0:16,0:16:30.06:0,30,361	0/0:22,0:22:51.12:0,51,671	0/0:16,0:16:33.05:0,33,397	0/0:17,0:17:42.07:0,42,498	0/0:27,0:27:54.11:0,54,670	0/0:24,0:24:66.16:0,66,869	1/1:8,20:28:45.15:914,45,0	0/0:21,0:21:23.96:0,24,556	0/0:18,0:18:27.03:0,27,321	0/0:28,0:28:69.16:0,69,880	0/0:39,0:40:99:0,105,1336	0/0:12,0:12:27.07:0,27,353	0/0:19,0:18:45.15:0,45,642	0/0:31,0:31:63.68:0,64,1167	0/0:20,0:20:45.13:0,45,608	1/1:9,26:35:81.24:1467,81,0	1/1:3,21:26:38.70:748,39,0	1/1:0,6:6:12.04:244,12,0
chr10	718357	.	G	GT	593.40	PASS	AB=0.755;AC=4;AF=0.071;AN=56;BaseQRankSum=1.019;DP=623;FS=4.082;HRun=10;HaplotypeScore=73.2011;InbreedingCoeff=0.3239;MQ=83.45;MQ0=0;MQRankSum=-1.486;QD=10.60;ReadPosRankSum=-0.584;VQSLOD=2.9328;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,17:23:7.69:476,8,0	0/0:14,0:14:29.95:0,30,246	0/0:23,0:23:21.01:0,21,194	0/0:17,0:19:9.31:0,9,167	0/0:31,0:32:67.90:0,68,544	0/0:34,0:36:67.81:0,68,696	0/0:16,0:17:40.96:0,41,326	0/0:30,0:30:45.34:0,45,493	0/1:18,1:19:26.53:27,0,294	0/0:25,0:27:60.98:0,61,478	0/0:16,1:19:16.98:0,17,318	0/0:16,0:16:35.92:0,36,295	0/0:18,0:19:52.96:0,53,423	0/0:18,1:19:12.84:0,13,301	0/0:29,1:31:38.24:0,38,514	0/0:17,0:19:49.02:0,49,381	0/1:3,11:14:17.82:197,0,18	0/0:14,0:14:29.95:0,30,246	0/0:16,1:18:8.99:0,9,267	0/0:30,0:30:53.84:0,54,440	0/0:13,0:13:1.30:0,1,215	0/0:34,1:35:51.87:0,52,633	0/0:21,0:21:50.91:0,51,419	0/0:26,0:27:61.96:0,62,499	0/0:21,0:21:47.90:0,48,394	0/0:24,0:25:46.91:0,47,375	0/0:25,0:26:61.91:0,62,493	0/0:16,0:15:35.93:0,36,296
chr10	719098	.	TA	T	5871.96	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=13.139;DP=710;FS=15.045;HRun=2;HaplotypeScore=68.1246;InbreedingCoeff=0.9999;MQ=94.60;MQ0=0;MQRankSum=-1.326;QD=39.15;ReadPosRankSum=1.965;VQSLOD=3.8893;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,117,1815	0/0:10,0:10:30.09:0,30,444	0/0:37,0:37:99:0,106,1536	0/0:29,0:29:84.12:0,84,1204	0/0:27,0:27:81.25:0,81,1246	0/0:16,0:16:48.16:0,48,764	0/0:20,0:20:60.19:0,60,931	1/1:0,32:32:93.22:1196,93,0	1/1:0,28:28:81.27:1131,81,0	0/0:41,0:41:99:0,120,1858	0/0:24,0:24:69.20:0,69,1035	0/0:24,0:24:72.22:0,72,1105	0/0:17,0:17:51.13:0,51,743	0/0:28,0:28:84.25:0,84,1273	0/0:25,0:25:75.22:0,75,1145	0/0:28,0:28:81.25:0,81,1247	0/0:21,0:21:63.21:0,63,1005	0/0:15,0:15:42.13:0,42,636	0/0:29,0:29:81.23:0,81,1230	0/0:22,0:22:66.21:0,66,1029	0/0:25,0:25:75.19:0,75,1103	0/0:22,0:22:66.17:0,66,962	0/0:16,0:16:48.15:0,48,740	0/0:28,0:28:84.27:0,84,1309	0/0:17,0:17:51.16:0,51,789	1/1:1,29:30:87.29:1208,87,0	1/1:0,33:33:87.29:1205,87,0	1/1:0,27:27:81.27:1131,81,0
chr10	719969	.	GC	G	922.02	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.336;DP=605;FS=0.000;HRun=4;HaplotypeScore=57.5243;InbreedingCoeff=0.9986;MQ=82.83;MQ0=0;MQRankSum=-3.866;QD=27.94;ReadPosRankSum=1.644;VQSLOD=2.9120;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,17:18:45.14:540,45,0	0/0:10,0:10:30.10:0,30,420	0/0:18,0:18:51.15:0,51,660	0/0:14,0:15:37.10:0,37,394	0/0:30,0:30:87.26:0,87,1179	0/0:20,0:20:57.17:0,57,769	0/0:23,0:23:66.20:0,66,906	0/0:24,0:24:66.20:0,66,880	0/0:23,0:23:66.22:0,66,924	0/0:27,0:27:75.25:0,75,1045	0/0:31,0:31:93.31:0,93,1300	0/0:18,0:18:51.17:0,51,714	0/0:24,0:24:66.22:0,66,924	0/0:24,0:24:69.22:0,69,946	0/0:19,0:19:57.19:0,57,796	0/0:8,0:8:24.08:0,24,336	1/1:0,15:15:42.13:504,42,0	0/0:23,0:23:69.23:0,69,966	0/0:16,0:16:42.10:0,42,538	0/0:33,0:33:96.31:0,96,1326	0/0:23,0:23:60.19:0,60,823	0/0:24,0:24:69.23:0,69,965	0/0:26,0:26:75.23:0,75,1016	0/0:19,0:19:54.15:0,54,722	0/0:19,0:19:57.19:0,57,798	0/0:27,0:27:81.25:0,81,1104	0/0:31,0:31:93.28:0,93,1266	0/0:17,0:17:51.17:0,51,714
chr10	720729	.	TCTGACAGCAGGTACTTCCTATTGGCTTGGC	T	3502.43	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=6.924;DP=660;FS=8.518;HRun=0;HaplotypeScore=399.3562;InbreedingCoeff=0.8131;MQ=55.16;MQ0=26;MQRankSum=-5.955;QD=40.26;ReadPosRankSum=1.931;VQSLOD=0.6772;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:10,30:38:35.88:2592,36,0	0/0:11,0:11:30.10:0,30,2858	0/1:28,0:2:3.03:3,0,54	0/0:26,0:6:18.06:0,18,884	0/0:20,0:18:48.15:0,48,4600	0/0:26,0:26:54.19:0,54,5586	0/0:30,0:30:84.29:0,84,8716	0/0:37,0:35:84.29:0,84,6961	0/0:25,0:25:72.25:0,72,8697	0/0:16,0:16:42.12:0,42,3424	0/0:23,0:22:60.21:0,60,6998	0/0:23,0:23:66.20:0,66,6113	0/0:20,0:20:60.18:0,60,6423	0/0:27,0:27:81.28:0,81,8534	0/0:22,0:22:54.19:0,54,6237	0/0:27,0:27:75.21:0,75,6975	1/1:10,9:18:12.04:907,12,0	0/0:28,0:27:78.27:0,78,9583	0/0:18,0:16:39.13:0,39,2015	0/0:18,0:18:48.09:0,48,5376	0/0:26,0:24:63.19:0,63,5932	0/0:24,0:23:57.19:0,57,6343	0/0:23,0:22:51.16:0,51,5187	0/0:21,0:20:57.18:0,57,6247	0/0:22,0:22:48.16:0,48,4583	0/0:28,0:28:78.27:0,78,7355	0/0:24,0:24:63.20:0,63,6142	0/0:8,0:8:12.04:0,12,1191
chr10	721004	.	GTCA	G	718.45	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.887;DP=630;FS=0.000;HRun=0;HaplotypeScore=103.7547;InbreedingCoeff=0.9785;MQ=91.24;MQ0=0;MQRankSum=-7.191;QD=29.94;ReadPosRankSum=1.349;VQSLOD=3.9061;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,16:18:49.68:682,50,0	0/0:9,0:9:27.09:0,27,637	0/0:26,0:27:78.27:0,78,1915	0/0:26,0:26:71.98:0,72,1594	0/0:23,0:23:63.22:0,63,1551	0/0:22,0:22:60.21:0,60,1450	0/0:23,0:23:69.24:0,69,1699	0/0:23,0:23:66.20:0,66,1556	0/0:25,0:25:75.26:0,75,1849	0/0:26,0:26:78.26:0,78,1851	0/0:14,0:14:39.13:0,39,958	0/0:28,0:28:80.87:0,81,1990	0/0:22,0:22:66.20:0,66,1498	0/0:24,0:24:72.25:0,72,1758	0/0:25,0:25:75.26:0,75,1847	0/0:18,0:18:54.19:0,54,1333	1/1:1,5:6:11.07:153,11,0	0/0:25,0:25:75.26:0,75,1848	0/0:17,0:17:51.16:0,51,1209	0/0:18,0:18:54.19:0,54,1302	0/0:42,0:42:99:0,126,3104	0/0:23,0:23:60.21:0,60,1448	0/0:26,0:26:69.24:0,69,1627	0/0:23,0:23:69.24:0,69,1692	0/0:28,0:28:81.26:0,81,1946	0/0:31,0:31:93.32:0,93,2264	0/0:30,0:29:90.29:0,90,2167	0/0:8,0:8:24.08:0,24,592
chr10	721009	.	TATCACATCTCACTTGCCCTAGGA	T	3144.94	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.610;DP=634;FS=3.014;HRun=0;HaplotypeScore=361.4355;InbreedingCoeff=0.9827;MQ=94.01;MQ0=0;MQRankSum=-7.565;QD=149.76;ReadPosRankSum=2.064;VQSLOD=2.3225;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,16:16:48.16:2701,48,0	0/0:8,0:8:24.08:0,24,2158	0/0:33,0:33:93.32:0,93,5892	0/0:24,0:24:63.22:0,63,4232	0/0:23,0:23:60.21:0,60,5678	0/0:22,0:22:60.21:0,60,6305	0/0:26,0:26:75.26:0,75,7288	0/0:27,0:27:78.27:0,78,6403	0/0:25,0:25:75.26:0,75,7489	0/0:25,0:25:72.25:0,72,7210	0/0:13,0:13:36.12:0,36,3554	0/0:29,0:29:84.29:0,84,7933	0/0:21,0:21:63.22:0,63,6415	0/0:24,0:24:72.25:0,72,6861	0/0:26,0:26:75.26:0,75,7705	0/0:17,0:17:51.18:0,51,4955	1/1:0,5:5:12.04:560,12,0	0/0:27,0:27:72.25:0,72,6898	0/0:16,0:16:48.16:0,48,3897	0/0:17,0:17:51.18:0,51,4752	0/0:41,0:41:99:0,120,10345	0/0:22,0:22:57.20:0,57,5116	0/0:26,0:26:66.21:0,66,5890	0/0:22,0:22:63.22:0,63,5638	0/0:28,0:28:81.26:0,81,7072	0/0:30,0:30:90.31:0,90,8734	0/0:30,0:29:90.31:0,90,8058	0/0:11,0:11:33.11:0,33,2559
chr10	721032	.	A	AT	1424.41	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.878;DP=672;FS=0.613;HRun=0;HaplotypeScore=84.7680;InbreedingCoeff=0.9975;MQ=90.86;MQ0=0;MQRankSum=-9.453;QD=29.07;ReadPosRankSum=-0.723;VQSLOD=3.3883;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:16,14:30:78.04:980,78,0	0/0:7,0:7:21.07:0,21,294	0/0:30,0:30:90.20:0,90,1197	0/0:33,0:33:93.31:0,93,1283	0/0:20,0:20:54.18:0,54,749	0/0:26,0:26:75.25:0,75,1049	0/0:27,0:27:81.27:0,81,1132	0/0:26,0:26:78.26:0,78,1091	0/0:25,0:25:75.24:0,75,1032	0/0:32,0:32:93.31:0,93,1296	0/0:12,0:12:33.10:0,33,445	0/0:34,0:34:99:0,102,1400	0/0:24,0:24:72.24:0,72,1006	0/0:27,0:27:75.25:0,75,1049	0/0:31,0:31:93.30:0,93,1286	0/0:18,0:18:54.18:0,54,753	1/1:5,14:19:39.09:566,39,0	0/0:22,0:22:66.22:0,66,923	0/0:15,0:15:42.14:0,42,587	0/0:19,0:19:54.17:0,54,738	0/0:37,0:37:99:0,111,1497	0/0:20,0:20:51.16:0,51,698	0/0:27,0:27:69.23:0,69,964	0/0:19,0:19:57.19:0,57,797	0/0:25,0:25:72.21:0,72,973	0/0:31,0:31:93.30:0,93,1287	0/0:26,0:25:78.26:0,78,1091	0/0:10,0:10:30.10:0,30,418
chr10	722093	.	T	TGAGA	3131.95	PASS	AC=46;AF=1.000;AN=46;BaseQRankSum=-0.044;DP=489;FS=0.000;HRun=0;HaplotypeScore=110.4581;InbreedingCoeff=-0.0917;MQ=49.38;MQ0=23;MQRankSum=-0.577;QD=7.70;ReadPosRankSum=0.489;VQSLOD=2.4955;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:27,1:27:17.99:229,18,0	1/1:11,0:11:3.01:60,3,0	./.	./.	1/1:35,0:32:12.04:223,12,0	1/1:15,0:14:3.88:26,4,0	1/1:14,0:14:3.01:41,3,0	./.	1/1:11,0:11:2.99:23,3,0	1/1:25,0:24:4.62:61,5,0	1/1:14,0:13:3.01:46,3,0	1/1:13,0:13:15.01:244,15,0	1/1:11,0:11:5.97:45,6,0	1/1:10,0:10:6.02:109,6,0	1/1:9,7:17:9.03:175,9,0	1/1:20,0:20:3.01:66,3,0	1/1:20,0:20:15:186,15,0	1/1:17,1:18:12.16:125,12,0	1/1:16,0:13:3.01:54,3,0	./.	1/1:16,0:16:24.07:428,24,0	./.	1/1:34,0:33:17.99:187,18,0	1/1:21,2:22:27.03:431,27,0	1/1:12,0:12:6.02:104,6,0	1/1:30,0:28:15.04:214,15,0	1/1:10,0:9:2.85:23,3,0	1/1:4,0:3:6.91:110,7,0
chr10	722746	.	TG	T	1407.99	PASS	AB=0.920;AC=6;AF=0.107;AN=56;BaseQRankSum=3.939;DP=651;FS=0.000;HRun=10;HaplotypeScore=76.8089;InbreedingCoeff=0.6029;MQ=81.76;MQ0=0;MQRankSum=-1.199;QD=9.20;ReadPosRankSum=2.897;VQSLOD=2.3938;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,36:41:95.96:833,96,0	0/0:7,0:7:18.01:0,18,186	0/0:17,0:18:32.95:0,33,371	0/0:28,0:28:37.48:0,37,457	0/1:21,2:23:9.96:10,0,336	0/0:18,0:18:33.09:0,33,365	0/0:31,0:31:57.13:0,57,614	0/0:11,0:17:11.49:0,11,62	0/0:9,0:22:34.72:0,35,222	0/0:27,0:27:21.05:0,21,224	0/0:9,0:9:12.02:0,12,123	0/0:19,0:19:42.55:0,43,447	0/0:29,0:29:51.05:0,51,529	0/0:26,2:29:27.88:0,28,492	0/0:23,1:24:28.05:0,28,512	0/0:24,1:25:31.07:0,31,555	1/1:5,27:32:77.98:677,78,0	0/0:25,0:25:63.17:0,63,697	0/0:28,0:27:45.89:0,46,569	0/0:14,0:14:18.03:0,18,190	0/1:52,5:57:22.31:22,0,900	0/0:23,1:24:16:0,16,383	0/0:16,0:16:33.07:0,33,356	0/0:20,1:21:25.08:0,25,505	0/0:21,0:21:42.11:0,42,465	0/0:11,0:19:17.19:0,17,93	0/0:8,0:19:28.46:0,28,151	0/0:4,0:8:11.64:0,12,72
chr10	724760	.	G	GT	5450.29	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-13.933;DP=702;FS=1.068;HRun=8;HaplotypeScore=67.8687;InbreedingCoeff=0.9812;MQ=69.87;MQ0=0;MQRankSum=-0.422;QD=25.83;ReadPosRankSum=0.455;VQSLOD=5.5371;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,31:34:81.24:934,81,0	0/0:11,0:11:30.02:0,30,275	0/0:22,0:18:8.86:0,9,154	0/0:10,0:8:10.59:0,11,85	0/0:29,0:29:51.78:0,52,645	0/0:33,0:33:84.02:0,84,758	0/0:25,0:25:69.03:0,69,632	1/1:5,24:29:69.15:755,69,0	1/1:5,36:41:90.27:1038,90,0	0/0:34,0:34:83.58:0,84,755	0/0:31,0:31:84.04:0,84,768	0/0:26,0:26:69.02:0,69,628	0/0:20,0:20:51:0,51,459	0/0:21,0:21:60.01:0,60,542	0/0:20,0:20:53.97:0,54,480	0/0:28,0:28:74.99:0,75,676	1/1:0,17:18:41.71:460,42,0	0/0:13,0:13:29.98:0,30,267	0/0:18,0:18:41.99:0,42,379	0/0:31,0:31:77.99:0,78,702	0/0:18,0:18:41.98:0,42,377	0/0:22,0:22:60.03:0,60,549	0/0:27,0:27:72.02:0,72,653	0/0:21,0:21:54.03:0,54,494	0/0:30,0:30:78.02:0,78,709	1/1:8,31:39:96.26:1087,96,0	1/1:4,29:33:75.22:866,75,0	1/1:4,13:17:27.08:312,27,0
chr10	725731	.	GCCCTGTACTGAGACT	G	9626.74	PASS	AB=0.543;AC=9;AF=0.161;AN=56;BaseQRankSum=13.630;DP=630;FS=7.588;HRun=0;HaplotypeScore=257.9911;InbreedingCoeff=0.8362;MQ=85.83;MQ0=0;MQRankSum=-12.568;QD=86.73;ReadPosRankSum=1.965;VQSLOD=3.1941;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,132,8989	0/0:11,0:11:30.10:0,30,2092	0/0:27,0:27:72.25:0,72,4257	0/0:20,0:20:53.95:0,54,2832	0/0:21,0:21:60.21:0,60,4315	0/0:23,0:23:66.23:0,66,4308	0/0:28,0:28:81.28:0,81,5294	1/1:9,12:21:36.11:1331,36,0	1/1:5,21:26:57.20:2508,57,0	0/0:23,0:23:69.24:0,69,4564	0/0:19,0:19:54.19:0,54,3994	0/0:21,0:21:63.22:0,63,4359	0/0:20,0:20:54.14:0,54,3546	0/0:33,0:33:90.31:0,90,5900	0/0:21,0:21:63.22:0,63,4498	0/0:29,0:29:81.26:0,81,5102	0/0:21,0:21:60.21:0,60,4158	0/0:6,0:6:18.06:0,18,1257	0/0:24,0:24:66.23:0,66,3908	0/0:22,0:22:63.22:0,63,4179	0/0:23,0:23:66.23:0,66,4682	0/0:13,0:13:36.12:0,36,2412	0/0:22,0:22:63.22:0,63,4424	0/0:22,0:22:63.20:0,63,4213	0/0:24,0:24:66.23:0,66,4560	0/1:4,21:25:99:2619,0,156	1/1:9,26:35:66.23:2904,66,0	1/1:1,3:4:6.02:264,6,0
chr10	727024	.	T	TTTTA	796.29	PASS	AB=0.714;AC=9;AF=0.173;AN=52;BaseQRankSum=-5.158;DP=165;FS=2.276;HRun=0;HaplotypeScore=27.2187;InbreedingCoeff=0.4915;MQ=77.31;MQ0=4;MQRankSum=-2.016;QD=22.12;ReadPosRankSum=-0.202;VQSLOD=3.0712;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:23.79:0,24,399	0/0:3,0:3:6.02:0,6,91	./.	0/0:9,0:4:6.02:0,6,77	0/0:11,0:11:24.08:0,24,399	0/0:4,0:4:12.04:0,12,200	0/0:4,0:4:6.02:0,6,90	1/1:4,2:6:6.01:98,6,0	1/1:2,2:4:6.02:148,6,0	0/0:6,0:6:18.06:0,18,300	0/0:3,0:3:3.01:0,3,50	0/0:5,0:5:6.02:0,6,100	0/0:1,0:1:3.01:0,3,50	./.	0/0:3,0:3:6.02:0,6,100	0/0:5,0:5:12.04:0,12,200	0/0:5,0:5:9.03:0,9,150	0/0:6,0:6:12.04:0,12,191	0/0:5,0:5:12.04:0,12,191	0/0:7,0:7:12.04:0,12,191	0/0:4,0:4:9.03:0,9,138	0/0:3,0:3:2.99:0,3,23	0/0:6,0:6:9.02:0,9,125	0/0:7,0:7:9.03:0,9,150	0/0:6,0:6:15.05:0,15,250	0/1:6,4:10:34.91:242,0,35	1/1:5,3:8:6.02:148,6,0	1/1:3,5:7:12.04:296,12,0
chr10	727109	.	A	AC	374.72	PASS	AB=1.000;AC=13;AF=0.813;AN=16;BaseQRankSum=-2.293;DP=45;FS=15.441;HRun=5;HaplotypeScore=9.5776;MQ=62.35;MQ0=9;MQRankSum=-2.293;QD=12.49;ReadPosRankSum=-0.594;VQSLOD=0.2699;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:3,0:1:1.82:0,2,5	0/1:12,0:2:17.34:17,0,26	1/1:3,0:3:3:25,3,0	1/1:2,3:4:9.03:109,9,0	1/1:0,1:1:3.01:34,3,0	1/1:2,5:7:15.05:194,15,0	./.	1/1:0,1:1:3.01:37,3,0	./.	./.	1/1:1,0:1:3.01:39,3,0	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.
chr10	727119	.	C	CA	164.14	PASS	AB=1.000;AC=9;AF=0.643;AN=14;BaseQRankSum=-1.733;DP=26;FS=16.532;HRun=0;HaplotypeScore=14.4918;MQ=74.29;MQ0=2;MQRankSum=-1.733;QD=14.92;ReadPosRankSum=0.000;VQSLOD=2.6945;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:1,0:1:3.01:0,3,42	0/0:7,0:2:3.01:0,3,42	0/1:2,0:2:0:0,0,0	1/1:3,0:2:5.72:29,6,0	1/1:1,0:1:2.84:14,3,0	1/1:0,4:4:12.04:186,12,0	./.	1/1:1,0:1:2.84:14,3,0	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.
chr10	754878	.	CTG	C	4055.63	PASS	AB=0.530;AC=9;AF=0.161;AN=56;BaseQRankSum=10.427;DP=762;FS=0.000;HRun=0;HaplotypeScore=96.8178;InbreedingCoeff=0.8662;MQ=72.52;MQ0=4;MQRankSum=-0.570;QD=35.27;ReadPosRankSum=0.282;VQSLOD=5.3891;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:96.33:0,96,1753	0/0:16,0:16:45.15:0,45,825	0/0:42,0:40:72.73:0,73,1486	0/0:41,0:32:73.38:0,73,1180	0/0:18,0:18:54.18:0,54,972	0/0:24,0:24:72.25:0,72,1311	0/0:31,0:31:84.23:0,84,1390	1/1:0,30:30:90.30:1274,90,0	1/1:3,15:18:36.12:516,36,0	0/0:36,0:36:99:0,102,1802	0/0:14,0:14:39.13:0,39,714	0/0:25,0:25:72.25:0,72,1291	0/0:28,0:28:84.29:0,84,1530	0/0:33,0:33:90.31:0,90,1620	0/0:26,0:26:75.23:0,75,1308	0/0:39,0:39:99:0,114,2083	0/0:27,0:27:78.27:0,78,1413	0/0:28,0:28:81.28:0,81,1469	0/0:27,0:26:69.23:0,69,1221	0/0:20,0:20:54.16:0,54,942	0/0:49,0:49:99:0,147,2594	0/0:21,0:21:60.21:0,60,1066	0/0:18,0:18:54.17:0,54,949	0/0:31,0:31:90.29:0,90,1604	0/0:19,0:19:57.18:0,57,1008	0/1:4,31:34:16.63:1148,0,17	1/1:0,25:24:63.21:903,63,0	1/1:0,7:7:15.05:215,15,0
chr10	756716	.	TTTTG	T	2217.97	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=10.143;DP=651;FS=1.823;HRun=0;HaplotypeScore=100.7420;InbreedingCoeff=0.9008;MQ=65.77;MQ0=2;MQRankSum=-0.857;QD=29.57;ReadPosRankSum=2.091;VQSLOD=3.8340;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,119,2654	0/0:11,0:11:21.07:0,21,507	0/0:19,0:13:5.30:0,5,237	0/0:20,0:15:23.56:0,24,400	0/0:28,0:28:63.22:0,63,1472	0/0:22,0:22:45.14:0,45,1020	0/0:12,0:12:27.08:0,27,571	0/0:28,0:28:39.10:0,39,689	1/1:8,10:18:27.09:438,27,0	0/0:30,0:30:63.21:0,63,1458	0/0:20,0:20:39.12:0,39,865	0/0:19,0:19:45.15:0,45,1047	0/0:20,0:20:39.13:0,39,912	0/0:21,0:21:45.14:0,45,1037	0/0:26,0:26:63.15:0,63,1320	0/0:23,1:24:2.55:0,3,1106	0/0:40,0:40:96.30:0,96,2269	0/0:26,0:26:60.20:0,60,1290	0/0:23,0:23:39.12:0,39,801	0/0:39,0:39:72.23:0,72,1632	0/0:7,0:7:9.03:0,9,215	0/0:19,0:19:45.14:0,45,972	0/0:29,0:29:57.20:0,57,1324	0/0:28,0:27:60.21:0,60,1450	0/0:16,0:16:42.14:0,42,958	1/1:7,16:23:51.17:820,51,0	1/1:5,21:26:51.17:826,51,0	1/1:1,7:8:18.06:292,18,0
chr10	758206	.	T	TG	2473.77	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-7.659;DP=663;FS=5.757;HRun=7;HaplotypeScore=61.0093;InbreedingCoeff=0.9996;MQ=88.29;MQ0=0;MQRankSum=-1.046;QD=27.80;ReadPosRankSum=2.899;VQSLOD=4.5265;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:78.55:0,79,932	0/0:11,0:11:33.05:0,33,319	0/0:27,0:27:63.05:0,63,593	0/0:20,0:20:47.22:0,47,418	0/0:28,0:28:72.09:0,72,684	0/0:26,0:26:54.07:0,54,521	0/0:17,0:17:45.07:0,45,434	0/0:25,0:25:66.10:0,66,637	1/1:1,10:11:30.09:362,30,0	0/0:37,0:37:99:0,99,951	0/0:24,0:24:66.10:0,66,637	0/0:29,0:29:81.10:0,81,770	0/0:18,0:18:51.08:0,51,492	0/0:32,0:32:90.14:0,90,869	0/0:18,0:18:51.08:0,51,493	0/0:25,0:25:63.09:0,63,608	0/0:31,0:31:84.07:0,84,796	0/0:13,0:13:36.06:0,36,348	0/0:23,0:23:60.08:0,60,574	0/0:29,0:29:84.13:0,84,811	0/0:22,0:22:60.09:0,60,579	0/0:32,0:32:87.12:0,87,834	0/0:20,0:20:45.06:0,45,435	0/0:12,0:12:33.05:0,33,319	0/0:21,0:21:57.07:0,57,545	1/1:7,22:29:40.21:754,40,0	1/1:3,28:32:81.08:975,81,0	1/1:0,17:17:45.14:543,45,0
chr10	758600	.	C	CGAAA	3944.65	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=-6.289;DP=686;FS=4.643;HRun=0;HaplotypeScore=112.1991;InbreedingCoeff=0.8803;MQ=71.28;MQ0=1;MQRankSum=-0.743;QD=34.01;ReadPosRankSum=-1.610;VQSLOD=3.2756;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:45.14:0,45,724	0/0:15,0:15:36.12:0,36,596	0/0:29,0:23:11.52:0,12,285	0/1:27,0:23:0.26:0,0,389	0/0:17,0:17:42.07:0,42,618	0/0:26,0:26:60.17:0,60,951	0/0:23,0:23:11.97:0,12,523	0/0:23,0:23:36.10:0,36,512	1/1:6,10:17:18.02:377,18,0	0/0:34,0:34:87.26:0,87,1336	0/0:25,0:25:57.15:0,57,869	0/0:28,0:28:63.17:0,63,974	0/0:21,0:21:51.12:0,51,792	0/0:22,0:22:48.15:0,48,775	0/0:30,0:30:63.17:0,63,976	0/0:30,0:30:72.21:0,72,1128	0/0:19,0:19:48.13:0,48,745	0/0:18,0:18:45.11:0,45,693	0/0:24,0:24:48.12:0,48,729	0/0:32,0:32:72.22:0,72,1151	0/0:22,0:21:48.10:0,48,699	0/0:31,0:31:75.15:0,75,1098	0/0:22,0:22:54.11:0,54,816	0/0:32,0:32:81.26:0,81,1316	0/0:25,0:25:51.13:0,51,820	1/1:8,24:33:84.17:1751,84,0	1/1:11,25:36:69.24:1668,69,0	1/1:1,2:3:6.02:148,6,0
chr10	758687	.	AG	A	1232.96	PASS	AB=0.570;AC=6;AF=0.107;AN=56;BaseQRankSum=10.162;DP=573;FS=1.743;HRun=2;HaplotypeScore=91.2774;InbreedingCoeff=0.6203;MQ=56.91;MQ0=14;MQRankSum=-6.712;QD=17.37;ReadPosRankSum=1.470;VQSLOD=3.9264;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:33.06:0,33,427	0/0:16,0:16:47.19:0,47,672	0/0:23,0:8:14.73:0,15,184	0/0:43,0:11:25.62:0,26,279	0/0:14,0:14:42.06:0,42,562	0/0:23,0:23:69.22:0,69,1014	0/0:20,0:20:57.07:0,57,802	0/0:24,0:23:62.90:0,63,820	1/1:2,14:16:47.73:411,48,0	0/0:19,0:19:57.16:0,57,796	0/0:28,0:28:84.27:0,84,1237	0/0:17,0:17:42.14:0,42,622	0/0:21,0:20:57.17:0,57,830	0/0:12,0:12:30.07:0,30,405	0/0:25,0:25:75.24:0,75,1102	0/0:20,0:19:54.18:0,54,809	0/0:14,1:15:19.04:0,19,494	0/0:25,0:25:64.45:0,64,867	0/0:25,0:22:65.01:0,65,896	0/0:21,0:21:63.21:0,63,940	0/0:14,0:14:38.96:0,39,553	0/0:21,0:21:63.04:0,63,908	0/0:23,0:23:59.22:0,59,839	0/0:21,0:21:63.21:0,63,926	0/0:18,1:19:51.64:0,52,750	0/1:7,17:22:86.41:387,0,86	1/1:4,22:24:28.57:528,29,0	0/1:1,4:3:27.28:44,0,27
chr10	758692	.	AG	A	1258.65	PASS	AB=0.703;AC=7;AF=0.125;AN=56;BaseQRankSum=10.392;DP=560;FS=1.079;HRun=2;HaplotypeScore=92.5799;InbreedingCoeff=0.5067;MQ=55.22;MQ0=13;MQRankSum=-7.389;QD=14.81;ReadPosRankSum=0.937;VQSLOD=3.3991;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:2.74:0,3,245	0/0:15,0:15:42.13:0,42,593	0/0:18,0:5:11.07:0,11,128	0/0:34,0:8:16.81:0,17,231	0/0:12,0:12:36.10:0,36,490	0/0:23,0:23:69.23:0,69,1012	0/0:20,0:21:50.10:0,50,693	0/0:26,0:25:59.92:0,60,740	1/1:0,16:16:45.02:416,45,0	0/0:21,0:21:60.64:0,61,797	0/0:27,0:27:78.25:0,78,1120	0/0:18,0:18:48.13:0,48,636	0/0:20,0:19:57.18:0,57,822	0/0:11,0:11:27.08:0,27,340	0/0:25,0:25:75.18:0,75,1056	0/0:20,0:19:54.18:0,54,782	0/1:14,1:15:56.98:57,0,280	0/0:23,0:23:60.08:0,60,850	0/0:26,0:23:54.62:0,55,558	0/0:20,0:20:57.15:0,57,790	0/0:17,0:17:41.99:0,42,558	0/0:23,0:23:57.12:0,57,749	0/0:23,0:23:61.81:0,62,849	0/0:21,0:21:60.11:0,60,823	0/0:19,0:19:55.43:0,55,796	0/1:9,15:22:25.16:370,0,25	1/1:5,20:23:37.35:514,37,0	0/1:1,4:3:6.37:44,0,6
chr10	758693	.	GGAAAGAAAGAAAGAAA	G	994.48	PASS	AB=1.000;AC=3;AF=0.056;AN=54;BaseQRankSum=4.326;DP=556;FS=19.138;HRun=0;HaplotypeScore=249.7450;InbreedingCoeff=0.5976;MQ=55.10;MQ0=13;MQRankSum=-2.162;QD=20.72;ReadPosRankSum=-3.750;VQSLOD=0.7762;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:18.06:0,18,511	0/0:14,0:14:36.12:0,36,1172	./.	0/0:32,0:8:10.22:0,10,76	0/0:12,0:12:33.10:0,33,1089	0/0:23,0:23:69.24:0,69,2452	0/0:21,0:21:54.13:0,54,1668	1/1:9,16:24:48.10:1071,48,0	0/0:16,0:16:40.44:0,40,891	0/0:21,0:21:57.18:0,57,1941	0/0:26,0:26:60.17:0,60,1903	0/0:18,0:18:36.07:0,36,1071	0/0:21,0:20:51.15:0,51,1622	0/0:11,0:11:24.08:0,24,937	0/0:25,0:25:66.22:0,66,2149	0/0:20,0:19:45.15:0,45,1712	0/0:14,0:15:36.09:0,36,790	0/1:23,0:23:28.95:29,0,1415	0/0:25,0:22:48.16:0,48,1370	0/0:19,0:19:42.14:0,42,1490	0/0:18,0:18:39.12:0,39,1197	0/0:22,0:22:45.15:0,45,1421	0/0:23,0:23:54.18:0,54,1827	0/0:21,0:21:51.05:0,51,1535	0/0:19,0:20:45.15:0,45,1544	0/0:25,0:23:48.23:0,48,1151	0/0:24,0:21:57.13:0,57,1335	0/0:5,0:3:9.03:0,9,186
chr10	758715	.	AAAGAAAGG	A	1637.09	PASS	AB=0.989;AC=21;AF=0.404;AN=52;BaseQRankSum=5.489;DP=512;FS=3.535;HRun=0;HaplotypeScore=181.0278;InbreedingCoeff=-0.5101;MQ=52.82;MQ0=6;MQRankSum=-0.379;QD=4.04;ReadPosRankSum=-10.600;VQSLOD=0.0505;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:17.74:0,18,114	0/0:14,0:14:4.48:0,4,219	./.	./.	0/1:17,0:17:99:115,0,169	0/1:28,0:28:56.36:56,0,415	0/0:23,0:18:10.89:0,11,334	1/1:21,0:21:24.67:167,25,0	0/1:15,0:15:3.29:3,0,164	0/1:28,0:27:99:131,0,288	0/1:20,0:20:55.69:56,0,314	0/1:21,0:21:60.55:61,0,113	0/1:22,0:21:98.78:99,0,257	0/1:18,0:18:99:151,0,151	0/1:25,0:25:99:117,0,356	0/1:23,0:22:79.13:79,0,332	0/0:15,0:15:17.56:0,18,196	0/1:19,0:19:16.48:16,0,239	0/1:15,5:19:99:103,0,217	0/0:17,0:17:47.29:0,47,500	0/1:15,0:14:7.76:8,0,175	0/1:22,0:22:99:122,0,181	0/0:22,0:22:47.35:0,47,402	0/1:18,0:18:17.02:17,0,255	0/1:17,0:17:22.17:22,0,250	0/1:23,0:21:99:214,0,191	0/1:28,0:26:99:208,0,187	0/1:5,0:3:30.83:46,0,31
chr10	758719	.	AAAGG	A	4189.32	PASS	AC=46;AF=0.958;AN=48;BaseQRankSum=-0.336;DP=509;FS=7.976;HRun=0;HaplotypeScore=133.9496;InbreedingCoeff=0.4858;MQ=52.98;MQ0=7;MQRankSum=1.417;QD=9.17;ReadPosRankSum=-1.549;VQSLOD=2.1385;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	1/1:14,0:14:6.01:71,6,0	./.	./.	1/1:18,0:18:30:291,30,0	1/1:28,0:28:26.98:244,27,0	1/1:24,0:19:8.93:65,9,0	./.	1/1:15,0:15:3.88:47,4,0	1/1:23,5:27:41.99:421,42,0	1/1:19,0:19:15.01:150,15,0	1/1:21,0:21:26.93:290,27,0	1/1:24,0:23:29.98:273,30,0	1/1:17,0:17:30.02:317,30,0	1/1:25,0:25:27:252,27,0	1/1:24,0:23:27:250,27,0	1/1:16,0:16:2.94:18,3,0	1/1:19,0:19:14.95:140,15,0	1/1:18,0:17:9:80,9,0	0/0:17,0:17:12.01:0,12,130	1/1:17,0:15:12.02:142,12,0	1/1:15,5:20:23.97:233,24,0	1/1:18,3:21:8.99:77,9,0	1/1:19,0:19:18:190,18,0	1/1:17,0:17:18.02:198,18,0	1/1:22,0:20:23.88:190,24,0	1/1:26,0:24:32.58:224,33,0	1/1:5,0:3:3:28,3,0
chr10	760061	.	GCA	G	527.29	PASS	AB=0.934;AC=23;AF=0.442;AN=52;BaseQRankSum=7.875;DP=562;FS=8.317;HRun=0;HaplotypeScore=103.9344;InbreedingCoeff=-0.0139;MQ=67.56;MQ0=8;MQRankSum=-4.914;QD=1.49;ReadPosRankSum=1.762;VQSLOD=0.8312;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:39,0:39:5.59:26,6,0	0/1:9,0:9:12.30:12,0,39	./.	./.	0/1:12,1:13:11.48:11,0,198	0/1:20,1:21:11.10:11,0,171	0/1:25,2:26:2.43:2,0,332	0/0:18,0:18:8.82:0,9,69	1/1:25,0:25:25.57:126,26,0	0/1:21,1:22:32.71:33,0,69	0/1:20,1:21:0.45:0,0,297	0/1:9,1:10:17.47:17,0,163	0/1:15,1:16:9.47:9,0,298	0/1:15,3:18:40.87:41,0,243	0/0:14,0:14:27.06:0,27,348	0/1:9,3:11:55.26:55,0,167	1/1:12,0:12:5.68:28,6,0	0/1:18,1:19:14.27:14,0,198	0/0:13,0:12:6:0,6,67	0/0:28,0:28:39.07:0,39,570	0/0:22,0:21:12.42:0,12,219	0/0:26,0:26:10.40:0,10,443	0/0:19,0:19:24.06:0,24,332	0/1:26,1:27:70.71:71,0,275	0/0:14,2:16:15.02:0,15,185	0/1:29,0:29:15.55:53,0,16	1/1:30,0:30:28.41:140,28,0	1/1:4,0:3:8.52:42,9,0
chr10	760079	.	ACACACACACACACACACACACACACACG	A	6490.29	PASS	AB=0.599;AC=6;AF=0.107;AN=56;BaseQRankSum=9.451;DP=619;FS=10.171;HRun=0;HaplotypeScore=356.3060;InbreedingCoeff=0.6596;MQ=52.19;MQ0=17;MQRankSum=-4.337;QD=63.63;ReadPosRankSum=3.619;VQSLOD=2.1088;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:42:51.11:0,51,3028	0/0:7,0:7:21.07:0,21,1947	0/0:16,0:6:15.05:0,15,471	0/0:18,0:6:12.03:0,12,508	0/0:18,0:18:45.15:0,45,4373	0/0:31,0:31:77.76:0,78,7095	0/0:29,0:28:72.72:0,73,6894	0/0:19,0:17:45.14:0,45,2663	1/1:4,22:26:27.09:1987,27,0	0/0:26,0:24:72.25:0,72,6199	0/0:23,0:23:63.22:0,63,6870	0/0:9,0:9:24.08:0,24,2477	0/0:13,0:13:39.13:0,39,4280	0/0:23,0:23:60.68:0,61,5798	0/0:18,0:18:50.12:0,50,5234	0/0:19,0:18:36.22:0,36,5353	0/0:12,0:12:30.10:0,30,1889	0/0:20,0:20:51.18:0,51,4192	0/0:11,0:10:27.09:0,27,2020	0/0:29,0:29:69.24:0,69,7530	0/0:34,0:32:69.21:0,69,5867	0/0:24,0:26:69.22:0,69,7582	0/0:23,0:23:56.30:0,56,5910	0/0:30,0:30:69.24:0,69,6782	0/0:19,0:19:33.01:0,33,2953	0/1:15,19:34:99:1617,0,462	1/1:4,23:27:30.10:2232,30,0	0/1:3,12:14:5.93:655,0,6
chr10	760101	.	ACACACG	A	2032.13	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=5.623;DP=611;FS=1.007;HRun=0;HaplotypeScore=148.3851;InbreedingCoeff=0.6868;MQ=58.22;MQ0=13;MQRankSum=-5.169;QD=12.39;ReadPosRankSum=2.293;VQSLOD=3.0846;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,21:29:6.02:139,6,0	0/0:5,0:5:12.02:0,12,235	0/0:17,0:12:15.43:0,15,231	0/1:17,0:9:2.23:2,0,112	0/0:20,0:20:44.85:0,45,756	0/0:34,0:34:83.38:0,83,1029	0/0:28,0:27:63:0,63,1216	0/1:26,0:24:99:364,0,107	1/1:23,0:23:27.09:434,27,0	0/0:30,0:28:71.11:0,71,825	0/0:31,0:31:77.95:0,78,1304	0/0:10,0:10:24.01:0,24,538	0/0:13,0:13:33.10:0,33,910	0/0:23,0:23:53.41:0,53,986	0/0:23,0:23:59.61:0,60,1074	0/0:20,0:19:17.77:0,18,877	1/1:11,0:11:23.57:242,24,0	0/0:14,0:14:30:0,30,660	0/0:13,0:12:31.22:0,31,336	0/0:34,0:34:83.87:0,84,1776	0/0:33,0:32:65.66:0,66,894	0/0:28,0:28:78.15:0,78,1827	0/0:24,0:24:53.75:0,54,1093	0/0:29,0:29:71.97:0,72,1128	0/0:18,0:18:35.29:0,35,529	0/1:20,0:20:13.54:398,0,14	1/1:23,0:23:30.10:482,30,0	1/1:14,0:14:8.23:144,8,0
chr10	763526	.	GC	G	3650.76	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=4.368;DP=572;FS=7.685;HRun=2;HaplotypeScore=264.2474;InbreedingCoeff=0.9897;MQ=52.90;MQ0=0;MQRankSum=-4.816;QD=36.88;ReadPosRankSum=2.110;VQSLOD=2.0224;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:69.05:0,69,1005	0/0:11,0:11:33.11:0,33,494	0/0:10,0:10:30.09:0,30,405	0/0:16,0:16:45.04:0,45,579	0/0:31,0:31:69.18:0,69,1028	0/0:23,0:23:63.17:0,63,917	0/0:20,0:20:57.01:0,57,734	1/1:0,14:14:42.14:545,42,0	1/1:1,28:29:84.27:1089,84,0	0/0:29,0:29:87.29:0,87,1301	0/0:14,0:14:33.09:0,33,494	0/0:24,0:24:72.20:0,72,1052	0/0:20,0:20:57.19:0,57,852	0/0:24,0:24:69.10:0,69,957	0/0:24,0:24:63.16:0,63,918	0/0:25,0:25:69.23:0,69,1033	0/0:14,0:14:35.91:0,36,533	0/0:17,0:17:42.14:0,42,624	0/0:23,0:23:69.23:0,69,1030	0/0:25,0:25:66.18:0,66,961	0/0:13,0:13:11.55:0,12,179	0/0:20,0:20:54.08:0,54,777	0/0:18,0:18:45.15:0,45,672	0/0:16,0:16:18.37:0,18,270	0/0:25,0:25:69.23:0,69,1031	1/1:1,24:25:30.38:889,30,0	1/1:0,22:22:60.20:778,60,0	1/1:0,9:9:27.09:350,27,0
chr10	764375	.	TAC	T	258.47	PASS	AB=0.911;AC=13;AF=0.241;AN=54;BaseQRankSum=5.920;DP=658;FS=11.711;HRun=0;HaplotypeScore=167.9286;InbreedingCoeff=-0.2029;MQ=42.87;MQ0=52;MQRankSum=-4.295;QD=1.12;ReadPosRankSum=2.186;VQSLOD=2.0891;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:19,1:23:4.18:4,0,92	0/0:10,0:10:2.78:0,3,200	0/0:22,0:2:3.01:0,3,48	./.	0/0:23,0:17:14.08:0,14,199	0/0:19,1:19:35.92:0,36,517	0/0:31,1:27:2.73:0,3,545	1/1:13,0:9:2.99:24,3,0	0/1:17,2:18:17.28:17,0,188	0/1:30,1:28:1.60:2,0,714	0/1:15,0:14:7.24:7,0,176	0/0:33,0:31:46.49:0,46,730	0/1:21,0:19:17.56:18,0,183	0/0:19,1:20:19.28:0,19,272	0/0:23,0:21:34.83:0,35,535	0/0:28,1:26:8.74:0,9,620	0/1:17,0:18:75.47:75,0,212	0/1:24,1:24:23.58:24,0,332	0/0:11,0:5:9.03:0,9,144	0/0:23,0:21:21.50:0,21,347	0/0:65,3:59:81.62:0,82,1257	0/0:26,0:23:30.10:0,30,460	0/1:15,0:13:8.53:9,0,342	0/0:39,1:37:0.56:0,1,676	0/0:28,0:27:10.40:0,10,416	0/1:21,0:18:67.22:67,0,137	0/1:13,1:14:58.40:58,0,80	0/1:1,3:6:82.96:91,0,83
chr10	764397	.	T	TAC	698.51	PASS	AB=0.895;AC=13;AF=0.260;AN=50;BaseQRankSum=7.254;DP=620;FS=43.828;HRun=0;HaplotypeScore=164.6188;InbreedingCoeff=0.2566;MQ=41.99;MQ0=53;MQRankSum=-7.499;QD=4.57;ReadPosRankSum=-0.017;VQSLOD=1.5531;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:15,7:21:31.66:168,0,32	0/1:9,1:10:41.90:42,0,65	./.	./.	0/0:23,0:18:18.01:0,18,205	0/0:18,0:17:35.98:0,36,427	0/0:28,0:24:38.86:0,39,450	./.	1/1:9,0:13:16.85:115,17,0	0/0:34,1:30:21.03:0,21,715	0/0:10,0:9:20.89:0,21,227	0/0:29,0:28:45.13:0,45,549	0/0:18,0:16:28.73:0,29,290	0/0:24,0:22:12.24:0,12,295	0/0:27,0:23:48.15:0,48,590	0/0:28,0:25:51.15:0,51,615	0/0:16,1:15:30.09:0,30,372	0/0:26,0:26:47.27:0,47,453	0/0:10,0:5:15:0,15,158	0/1:15,2:15:37.34:37,0,135	0/0:77,1:66:80.72:0,81,1163	0/1:22,1:20:14.13:14,0,377	0/1:15,1:14:27.95:28,0,207	0/0:46,0:42:27.98:0,28,677	0/1:21,3:22:69.55:70,0,140	0/1:10,1:10:84.36:112,0,84	1/1:8,0:9:14.18:119,14,0	1/1:1,0:6:17.99:156,18,0
chr10	764407	.	C	CACAG	1035.69	PASS	AB=0.949;AC=9;AF=0.173;AN=52;BaseQRankSum=5.157;DP=637;FS=68.481;HRun=0;HaplotypeScore=202.8786;InbreedingCoeff=0.5490;MQ=41.83;MQ0=45;MQRankSum=-6.237;QD=15.01;ReadPosRankSum=1.157;VQSLOD=0.3914;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:21:1.19:1,0,60	0/1:8,0:8:20.96:21,0,103	./.	./.	0/0:21,0:16:23.93:0,24,331	0/0:18,0:17:38.95:0,39,661	0/0:28,0:24:50.65:0,51,749	0/0:14,0:4:0.09:0,0,36	1/1:10,2:11:15.52:272,16,0	0/0:37,0:31:71.01:0,71,1169	0/0:12,0:11:23.89:0,24,374	0/0:31,0:30:56.71:0,57,900	0/0:23,0:21:41.68:0,42,521	0/0:24,0:22:37.79:0,38,538	0/0:29,0:24:51.13:0,51,909	0/0:31,0:29:63:0,63,1013	0/0:17,0:15:30.10:0,30,567	0/0:29,0:27:59.99:0,60,849	0/0:13,0:6:18.05:0,18,281	0/0:18,0:16:27.76:0,28,357	0/0:86,0:74:99:0,139,2128	0/0:25,0:22:33.22:0,33,631	0/0:15,0:13:5.02:0,5,345	0/0:47,0:44:71.66:0,72,1178	0/0:21,0:19:17.93:0,18,287	0/1:9,2:9:99:201,0,153	1/1:7,2:8:12.88:328,13,0	1/1:6,1:7:18.06:358,18,0
chr10	764413	.	TAC	T	140.86	PASS	AB=0.888;AC=4;AF=0.077;AN=52;BaseQRankSum=5.632;DP=644;FS=0.000;HRun=0;HaplotypeScore=190.7520;InbreedingCoeff=-0.0892;MQ=42.31;MQ0=41;MQRankSum=-6.386;QD=1.85;ReadPosRankSum=-1.492;VQSLOD=2.3548;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:17,2:19:37.91:65,0,38	0/0:11,0:11:14.85:0,15,153	./.	./.	0/0:22,0:17:20.62:0,21,301	0/0:17,0:16:36.12:0,36,582	0/0:29,0:25:42.08:0,42,657	0/1:18,0:4:9.31:9,0,118	0/0:11,0:10:17.09:0,17,242	0/0:39,0:32:51.98:0,52,930	0/0:14,0:13:21.04:0,21,316	0/0:33,0:33:57.10:0,57,871	0/0:20,0:18:17.26:0,17,542	0/0:23,0:21:43.63:0,44,652	0/0:29,1:24:54.10:0,54,828	0/0:29,0:28:60.12:0,60,944	0/1:10,5:14:69.94:132,0,70	0/0:29,0:28:7.34:0,7,629	0/0:13,0:6:15.52:0,16,224	0/0:18,0:16:28.93:0,29,425	0/0:85,0:74:99:0,111,2170	0/0:26,0:23:50.72:0,51,675	0/0:16,0:14:14.31:0,14,364	0/0:48,0:45:69.10:0,69,1089	0/1:21,1:20:39.10:39,0,156	0/0:10,0:8:17.09:0,17,250	0/0:7,0:7:14.48:0,14,189	0/0:7,0:7:21.07:0,21,304
chr10	764433	.	TAC	T	162.99	PASS	AB=0.969;AC=13;AF=0.250;AN=52;BaseQRankSum=6.296;DP=698;FS=0.794;HRun=0;HaplotypeScore=178.7914;InbreedingCoeff=0.4687;MQ=42.94;MQ0=68;MQRankSum=-5.129;QD=1.34;ReadPosRankSum=-1.798;VQSLOD=2.3351;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/0:11,0:10:13.34:0,13,192	./.	0/0:28,0:1:3.01:0,3,44	0/0:24,0:22:36.12:0,36,545	0/0:17,0:17:38.97:0,39,541	0/0:34,0:33:68.21:0,68,1053	1/1:15,6:4:6.02:73,6,0	1/1:7,1:8:6.95:62,7,0	0/0:34,0:27:20.85:0,21,659	0/0:14,0:13:22.89:0,23,344	0/1:41,2:43:10.81:11,0,881	0/0:19,0:18:9.28:0,9,529	0/0:26,1:25:14.53:0,15,662	0/0:35,0:30:56.62:0,57,828	0/0:28,0:27:50.72:0,51,792	1/1:9,1:9:5.54:25,6,0	0/0:33,0:33:7.56:0,8,631	0/0:15,0:6:6.02:0,6,97	0/1:18,1:18:47.67:48,0,251	0/0:96,1:86:99:0,131,2327	0/0:29,0:28:25.13:0,25,468	0/0:15,0:13:29.93:0,30,371	0/0:49,0:46:53.52:0,54,1233	0/0:21,0:18:24.24:0,24,290	0/1:9,0:6:22.04:22,0,105	1/1:6,0:6:3.01:36,3,0	1/1:3,2:5:3.01:36,3,0
chr10	764451	.	CAAGT	C	470.83	PASS	AB=0.919;AC=12;AF=0.214;AN=56;BaseQRankSum=5.485;DP=760;FS=33.343;HRun=0;HaplotypeScore=192.2831;InbreedingCoeff=0.0049;MQ=43.37;MQ0=64;MQRankSum=-2.911;QD=2.47;ReadPosRankSum=-2.225;VQSLOD=1.1474;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:3:0.47:0,0,1	0/0:12,1:12:22.75:0,23,448	0/0:55,3:2:3.01:0,3,77	0/0:43,0:2:5.61:0,6,74	0/1:20,2:22:39.55:40,0,930	0/0:16,1:17:38.93:0,39,905	0/0:38,0:36:93.12:0,93,2331	0/0:13,0:2:5.98:0,6,56	0/0:3,0:3:5.55:0,6,19	0/1:36,3:32:99:148,0,1542	0/1:12,2:13:9.61:10,0,691	0/0:47,0:47:3.64:0,4,1554	0/0:30,1:30:37.48:0,37,1255	0/0:32,1:31:37.52:0,38,1297	0/0:38,1:34:60.73:0,61,1594	0/0:29,0:29:1.31:0,1,1109	1/1:4,3:6:14.64:209,15,0	0/1:28,3:30:84.50:84,0,886	0/0:18,0:5:12.03:0,12,292	0/1:17,2:19:7.09:7,0,598	0/0:106,3:97:99:0,176,5023	0/1:25,2:26:15.57:16,0,890	0/1:20,2:21:66.11:66,0,767	0/0:51,0:49:96.69:0,97,2359	0/0:17,2:17:31.30:0,31,577	0/1:6,0:4:26.88:27,0,174	0/0:1,0:1:2.98:0,3,21	1/1:3,0:3:2.04:6,2,0
chr10	764452	.	AAG	A	271.63	PASS	AB=0.975;AC=12;AF=0.214;AN=56;BaseQRankSum=6.050;DP=746;FS=19.608;HRun=0;HaplotypeScore=168.5982;InbreedingCoeff=0.0808;MQ=43.54;MQ0=62;MQRankSum=-1.334;QD=1.21;ReadPosRankSum=-1.099;VQSLOD=0.8199;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:3:0.47:0,0,1	0/0:12,0:11:22.27:0,22,310	0/0:57,2:2:2.80:0,3,40	0/1:45,2:2:5.98:6,0,26	0/1:24,0:24:7.92:8,0,756	0/0:17,0:17:38.72:0,39,705	0/0:36,2:36:92.98:0,93,1710	0/0:11,0:2:4.04:0,4,15	0/0:3,0:3:2.18:0,2,5	0/1:34,4:31:99:105,0,1048	0/0:14,0:13:14.65:0,15,526	0/0:43,3:45:26:0,26,1158	0/0:30,0:30:49.32:0,49,847	0/0:32,0:30:27.08:0,27,902	0/0:38,0:34:57.27:0,57,1187	0/1:28,1:29:3.31:3,0,784	1/1:7,0:6:7.53:125,8,0	0/1:27,1:28:49.01:49,0,684	0/0:16,0:4:12.04:0,12,221	0/1:19,0:18:34.88:35,0,397	0/0:103,2:93:99:0,190,3603	0/0:24,3:26:4.20:0,4,649	0/1:22,0:21:56.30:56,0,558	0/0:49,0:47:87.01:0,87,1548	0/0:17,1:16:31.30:0,31,467	0/1:6,0:4:9.19:9,0,116	0/0:1,0:1:0.47:0,0,1	1/1:3,0:3:2.74:12,3,0
chr10	764453	.	AGT	A	275.74	PASS	AB=0.977;AC=11;AF=0.196;AN=56;BaseQRankSum=6.267;DP=746;FS=41.151;HRun=0;HaplotypeScore=168.8667;InbreedingCoeff=0.0712;MQ=43.44;MQ0=62;MQRankSum=-2.103;QD=1.55;ReadPosRankSum=-2.418;VQSLOD=0.4345;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:3:0.39:0,0,1	0/0:10,2:11:8.08:0,8,319	0/0:60,1:2:5.51:0,6,68	0/0:46,0:2:5.61:0,6,60	0/1:23,1:24:11.62:12,0,789	0/0:17,0:17:38.48:0,38,626	0/0:38,0:36:93.14:0,93,1767	0/0:10,0:2:5.99:0,6,57	0/0:2,1:3:4.43:0,4,19	0/1:39,0:32:92.20:92,0,1192	0/0:14,0:13:14.64:0,15,525	0/0:44,2:45:37.55:0,38,1141	0/0:30,0:30:45.96:0,46,950	0/0:31,0:29:7.24:0,7,864	0/0:35,2:33:30.76:0,31,1101	0/1:29,0:29:0.38:0,0,759	1/1:6,1:6:7.43:125,7,0	0/1:28,1:28:72.11:72,0,634	0/0:16,0:4:12.04:0,12,216	0/1:18,2:19:19.91:20,0,485	0/0:102,3:93:99:0,164,3636	0/0:27,0:26:2.99:0,3,625	0/1:21,0:20:68.49:68,0,541	0/0:48,1:47:79.29:0,79,1569	0/0:16,1:15:26.74:0,27,439	0/1:6,0:4:8.01:8,0,125	0/0:1,0:1:2.98:0,3,21	1/1:3,0:3:2.74:12,3,0
chr10	764479	.	CAAGT	C	213.48	PASS	AB=0.952;AC=10;AF=0.179;AN=56;BaseQRankSum=5.810;DP=791;FS=17.279;HRun=0;HaplotypeScore=190.3435;InbreedingCoeff=0.1562;MQ=44.96;MQ0=25;MQRankSum=0.141;QD=1.59;ReadPosRankSum=-1.744;VQSLOD=1.3184;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:2,1:3:0.47:0,0,1	0/1:8,3:10:8.08:8,0,402	0/0:69,0:6:9.50:0,9,191	0/0:60,1:5:12.04:0,12,252	0/0:25,2:27:60.04:0,60,1646	0/0:12,0:12:18.06:0,18,472	0/0:34,1:34:78.21:0,78,1785	1/1:7,1:3:3.01:56,3,0	0/0:1,0:1:0:0,0,0	0/1:47,2:45:99:110,0,2424	0/1:19,0:18:49.58:50,0,705	0/0:46,1:47:19.19:0,19,1570	0/0:33,0:33:68.24:0,68,1489	0/0:29,0:28:61.45:0,61,1528	0/0:36,1:33:70.03:0,70,1680	0/0:29,0:29:69.08:0,69,1491	0/0:3,0:3:1.25:0,1,3	0/0:18,3:21:12.45:0,12,843	0/0:11,0:7:11.95:0,12,319	0/1:27,1:27:28.23:28,0,1228	0/0:120,3:115:99:0,268,6843	0/0:27,4:31:11.38:0,11,1009	0/0:23,0:23:34.50:0,34,1395	0/0:52,3:54:99:0,109,2604	0/1:16,0:15:10.74:11,0,660	0/1:2,0:2:27.75:28,0,76	1/1:0,1:1:3.01:55,3,0	0/0:2,0:2:0.68:0,1,11
chr10	764480	.	AAG	A	95.47	PASS	AB=0.980;AC=11;AF=0.196;AN=56;BaseQRankSum=5.872;DP=775;FS=28.298;HRun=0;HaplotypeScore=165.3959;InbreedingCoeff=0.1080;MQ=45.23;MQ0=26;MQRankSum=-0.137;QD=0.60;ReadPosRankSum=-1.518;VQSLOD=1.1996;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:2,1:3:0.47:0,0,1	0/1:11,0:10:8.52:9,0,295	0/0:72,0:6:11.90:0,12,173	0/0:62,0:5:12.04:0,12,230	0/0:27,0:27:68.82:0,69,1260	0/0:10,1:11:18.06:0,18,360	0/0:34,1:34:78.21:0,78,1366	1/1:8,0:3:3.01:38,3,0	0/0:1,0:1:0:0,0,0	0/1:45,2:45:67.88:68,0,1699	0/1:16,2:17:16.37:16,0,532	0/0:45,1:45:27.23:0,27,1183	0/0:32,0:32:68.13:0,68,1130	0/0:30,0:29:58.23:0,58,1125	0/0:36,0:33:80.77:0,81,1314	0/0:28,0:28:69.08:0,69,1117	0/0:1,0:1:2.80:0,3,13	0/1:22,0:21:15.91:16,0,629	0/0:10,0:6:5.75:0,6,240	0/1:27,0:27:22.57:23,0,932	0/0:117,0:110:99:0,239,4968	0/0:28,3:31:28.05:0,28,728	0/1:24,0:24:9.43:9,0,942	0/0:54,0:53:99:0,108,1889	0/0:16,1:16:7.17:0,7,541	0/1:2,0:2:16.83:17,0,51	1/1:1,0:1:3.01:35,3,0	0/0:2,0:2:0.82:0,1,2
chr10	764481	.	AGT	A	172.48	PASS	AB=0.977;AC=13;AF=0.241;AN=54;BaseQRankSum=6.119;DP=768;FS=23.602;HRun=0;HaplotypeScore=168.1375;InbreedingCoeff=0.1278;MQ=45.15;MQ0=26;MQRankSum=-1.703;QD=1.08;ReadPosRankSum=-1.948;VQSLOD=1.0057;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:3,0:3:0.47:0,0,1	0/1:11,0:10:24.26:24,0,262	0/0:69,1:6:12.30:0,12,167	0/0:62,0:4:12.04:0,12,178	0/0:28,0:28:71.52:0,72,1237	0/0:11,0:11:18.06:0,18,330	0/0:33,0:32:73.57:0,74,1269	1/1:8,0:3:3.01:38,3,0	0/0:1,0:1:0:0,0,0	0/1:44,1:43:99:100,0,1755	0/1:18,0:17:12.07:12,0,498	0/0:44,1:44:4.92:0,5,1069	0/0:32,0:32:67.03:0,67,1050	0/0:28,0:27:49.81:0,50,1044	0/0:35,0:32:74.40:0,74,1235	0/0:27,1:28:58.74:0,59,1067	./.	0/1:23,0:22:22.10:22,0,596	0/0:10,0:6:5.76:0,6,221	0/1:24,3:27:43.59:44,0,879	0/0:119,0:112:99:0,208,4977	0/0:31,0:31:29.40:0,29,735	0/1:22,1:23:10.47:10,0,969	0/0:52,1:52:78.16:0,78,1752	0/0:16,1:16:6.97:0,7,541	0/1:2,0:2:10.75:11,0,51	1/1:1,0:1:3.01:35,3,0	1/1:2,0:2:2.92:17,3,0
chr10	764537	.	CAAGT	C	96.93	PASS	AB=0.913;AC=6;AF=0.107;AN=56;BaseQRankSum=4.890;DP=810;FS=5.947;HRun=0;HaplotypeScore=193.6387;InbreedingCoeff=-0.1164;MQ=46.77;MQ0=42;MQRankSum=-0.698;QD=1.23;ReadPosRankSum=-3.758;VQSLOD=0.7583;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:10,3:11:14.82:15,0,38	0/0:6,0:6:12.04:0,12,303	0/0:37,0:6:14.51:0,15,209	0/0:36,0:7:21.02:0,21,344	0/0:37,0:36:86.77:0,87,2037	0/0:13,0:12:21.07:0,21,585	0/0:33,0:25:66.18:0,66,1652	0/0:24,0:5:15.05:0,15,347	0/1:5,0:5:29.08:36,0,29	0/1:37,2:37:30.88:31,0,1482	0/0:20,0:19:43.38:0,43,1015	0/0:31,0:30:61.19:0,61,1369	0/0:41,1:38:89.73:0,90,2027	0/0:35,1:33:12.49:0,12,1078	0/0:32,0:32:69.89:0,70,1548	0/0:28,0:26:51.27:0,51,1480	0/1:3,2:5:15.33:86,0,15	0/0:29,2:29:20.33:0,20,1648	0/0:15,0:9:27.09:0,27,638	0/0:29,0:27:71.49:0,71,1432	0/0:142,0:129:99:0,312,7929	0/0:33,0:31:57.82:0,58,1499	0/0:35,0:34:81.23:0,81,1984	0/0:46,1:45:99:0,108,2858	0/0:20,0:18:20.95:0,21,1009	0/1:11,0:6:26.08:26,0,207	0/1:6,0:6:26.79:27,0,99	0/0:3,0:3:9.03:0,9,126
chr10	764539	.	AGT	A	178.19	PASS	AB=0.982;AC=8;AF=0.143;AN=56;BaseQRankSum=5.416;DP=780;FS=2.296;HRun=0;HaplotypeScore=164.1253;InbreedingCoeff=0.1386;MQ=46.46;MQ0=44;MQRankSum=-1.689;QD=1.86;ReadPosRankSum=-3.574;VQSLOD=1.8329;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:13,0:11:27.62:47,0,28	0/0:5,1:6:15.04:0,15,258	0/0:38,0:5:14.37:0,14,166	0/0:33,0:7:20.99:0,21,259	0/0:36,1:36:85.51:0,86,1431	0/0:11,0:10:21.07:0,21,425	0/0:33,0:25:63:0,63,1187	0/0:24,0:5:15.05:0,15,303	0/1:5,0:5:1.45:55,0,1	0/1:37,1:34:84.46:84,0,912	0/0:17,1:17:38.95:0,39,673	0/0:28,0:28:59.63:0,60,1015	0/0:39,0:35:84.70:0,85,1405	0/0:35,0:32:1.86:0,2,776	0/0:30,0:30:66.91:0,67,1039	0/0:27,0:25:41.65:0,42,970	1/1:5,0:5:4.91:73,5,0	0/0:30,1:29:38.94:0,39,1210	0/0:17,0:9:27.09:0,27,496	0/0:28,0:26:26.74:0,27,870	0/0:136,0:122:99:0,304,5533	0/0:29,0:27:57.04:0,57,1065	0/0:32,1:32:71.68:0,72,1379	0/0:47,0:45:99:0,104,1997	0/1:18,0:16:3.89:4,0,666	0/1:10,1:6:30.30:30,0,171	0/1:6,0:6:12.29:12,0,75	0/0:3,0:3:3.44:0,3,107
chr10	764541	.	TAC	T	242.51	PASS	AB=0.906;AC=9;AF=0.161;AN=56;BaseQRankSum=3.777;DP=797;FS=4.914;HRun=0;HaplotypeScore=170.0066;InbreedingCoeff=0.4122;MQ=46.30;MQ0=47;MQRankSum=-1.810;QD=3.32;ReadPosRankSum=-2.510;VQSLOD=2.4197;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:10,3:11:0.72:91,1,0	0/0:6,0:6:15.05:0,15,242	0/0:36,0:5:5.81:0,6,62	0/0:33,0:6:6:0,6,62	0/0:36,1:36:19.83:0,20,840	0/0:12,0:11:24.08:0,24,379	0/0:33,0:25:57.19:0,57,929	0/0:23,1:5:15.05:0,15,232	1/1:4,3:7:13.48:148,13,0	0/0:40,0:35:76.93:0,77,1093	0/0:19,0:18:37.37:0,37,576	0/0:29,0:29:57.16:0,57,887	0/0:41,0:37:75.24:0,75,1154	0/0:36,0:32:56.03:0,56,739	0/0:32,0:32:49.68:0,50,724	0/1:26,2:26:25.30:25,0,539	1/1:4,2:5:4.38:71,4,0	0/0:32,0:30:79.10:0,79,1199	0/0:17,0:9:21.07:0,21,342	0/0:27,1:26:11.12:0,11,646	0/0:134,2:123:99:0,262,4046	0/0:29,0:27:58.03:0,58,852	0/0:34,0:33:34.12:0,34,838	0/0:48,0:46:90.30:0,90,1447	0/0:17,0:15:32.47:0,32,498	0/1:12,1:6:19.04:19,0,138	0/1:5,1:6:25.65:26,0,84	0/0:4,0:4:12.02:0,12,156
chr10	764561	.	T	TAC	179.99	PASS	AB=0.865;AC=4;AF=0.077;AN=52;BaseQRankSum=5.684;DP=768;FS=3.395;HRun=0;HaplotypeScore=169.1346;InbreedingCoeff=-0.0973;MQ=45.05;MQ0=62;MQRankSum=-3.942;QD=4.09;ReadPosRankSum=-4.337;VQSLOD=1.8776;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:11.20:0,11,94	0/0:7,0:7:18.05:0,18,205	./.	./.	0/0:30,0:28:47.77:0,48,574	0/0:14,0:13:22.31:0,22,261	0/0:35,0:27:63.18:0,63,761	0/0:32,0:6:3.01:0,3,37	0/1:10,1:11:95.04:95,0,158	0/0:33,0:27:51.14:0,51,611	0/0:20,0:19:30.46:0,30,369	0/0:37,0:37:52.49:0,52,689	0/0:37,0:31:59.29:0,59,681	0/0:40,0:35:57.63:0,58,618	0/0:37,0:34:33.49:0,33,470	0/0:29,0:27:32.52:0,33,381	0/0:9,0:6:8.08:0,8,108	0/0:32,0:31:59.38:0,59,741	0/0:19,0:8:15.04:0,15,176	0/1:22,0:19:8.65:9,0,340	0/0:133,1:119:99:0,213,2471	0/0:24,0:22:8.37:0,8,370	0/0:31,0:29:49.26:0,49,565	0/0:39,0:38:75.21:0,75,897	0/0:15,0:14:24.05:0,24,278	0/0:12,1:8:9.50:0,9,112	0/1:6,1:7:56.84:76,0,57	0/1:2,2:4:23.25:105,0,23
chr10	764615	.	TAC	T	286.02	PASS	AB=0.799;AC=3;AF=0.058;AN=52;BaseQRankSum=4.812;DP=678;FS=0.824;HRun=0;HaplotypeScore=168.1970;InbreedingCoeff=-0.0654;MQ=45.12;MQ0=65;MQRankSum=-2.943;QD=3.87;ReadPosRankSum=-2.790;VQSLOD=2.6659;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:8,12:17:19.90:281,0,20	0/0:13,0:13:27.04:0,27,430	./.	./.	0/0:16,0:15:19.58:0,20,384	0/0:10,0:8:18.98:0,19,261	0/0:30,0:23:54.12:0,54,826	0/0:32,0:20:54.16:0,54,865	0/0:17,0:16:4.05:0,4,461	0/0:30,0:23:60.15:0,60,881	0/0:11,0:9:12.85:0,13,200	0/0:34,1:33:11.93:0,12,861	0/0:33,0:30:64.92:0,65,888	0/0:37,0:31:53.12:0,53,783	0/0:41,0:34:73.09:0,73,1147	0/0:33,0:31:17.72:0,18,748	0/1:15,4:15:89.66:90,0,156	0/0:26,0:26:42.90:0,43,810	0/0:15,0:7:21.07:0,21,319	0/0:23,0:20:42.31:0,42,583	0/0:99,0:87:99:0,184,2986	0/0:18,0:16:42.12:0,42,646	0/0:17,0:15:37.84:0,38,586	0/1:33,2:29:11.84:12,0,877	0/0:15,0:14:33.05:0,33,511	0/0:10,0:10:27.09:0,27,405	0/0:14,0:12:15.92:0,16,249	0/0:5,0:5:12.04:0,12,198
chr10	764633	.	T	TAC	928.64	PASS	AB=0.887;AC=9;AF=0.173;AN=52;BaseQRankSum=5.052;DP=666;FS=0.000;HRun=0;HaplotypeScore=166.3991;InbreedingCoeff=0.5542;MQ=45.39;MQ0=61;MQRankSum=-3.923;QD=12.22;ReadPosRankSum=-1.815;VQSLOD=3.2281;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:22,3:21:42.67:43,0,338	0/0:11,0:11:24.06:0,24,283	./.	./.	0/0:13,0:12:28.26:0,28,297	0/0:10,0:9:16.29:0,16,186	0/0:28,0:23:60.18:0,60,732	0/0:31,1:16:36.11:0,36,450	1/1:6,9:14:31.13:438,31,0	0/0:27,0:21:43.21:0,43,512	0/1:11,0:9:6.81:7,0,158	0/0:36,0:35:51.79:0,52,581	0/0:32,0:28:55.96:0,56,621	0/0:29,0:25:9.16:0,9,434	0/0:41,0:36:71.09:0,71,796	0/0:29,0:28:10.30:0,10,490	0/0:23,0:17:23.82:0,24,288	0/0:29,1:30:8.97:0,9,618	0/0:22,0:9:26.83:0,27,286	0/0:19,0:16:38.17:0,38,446	0/0:100,0:88:99:0,154,1859	0/0:16,0:17:36.48:0,36,423	0/0:13,0:13:27.74:0,28,312	0/0:33,0:29:66.18:0,66,808	0/0:20,0:20:49.64:0,50,590	0/1:7,3:10:50.99:263,0,51	1/1:2,9:9:13.76:201,14,0	1/1:1,3:4:9.02:125,9,0
chr10	764667	.	TAC	T	139.90	PASS	AB=0.848;AC=4;AF=0.077;AN=52;BaseQRankSum=5.472;DP=579;FS=5.422;HRun=0;HaplotypeScore=142.4563;InbreedingCoeff=-0.1036;MQ=45.98;MQ0=23;MQRankSum=-4.950;QD=2.69;ReadPosRankSum=-4.036;VQSLOD=1.1736;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:18:9.75:0,10,135	0/0:12,1:13:5.84:0,6,221	./.	./.	0/0:15,0:15:28.34:0,28,443	0/0:9,0:8:24.08:0,24,391	0/0:25,0:24:45.62:0,46,719	0/0:14,1:5:6.02:0,6,98	0/0:8,1:9:4.22:0,4,24	0/0:23,0:20:51.14:0,51,774	0/1:10,1:10:13.10:13,0,313	0/0:25,0:25:40.47:0,40,597	0/0:29,0:28:57.19:0,57,893	0/0:25,0:22:37.90:0,38,571	0/0:29,0:28:45.87:0,46,712	0/0:23,0:21:37.57:0,38,583	0/1:15,1:17:11.37:11,0,89	0/0:22,0:22:44.98:0,45,671	0/0:23,0:12:29.99:0,30,416	0/0:21,0:20:39.69:0,40,587	0/0:78,2:74:99:0,135,2020	0/0:20,0:19:30.10:0,30,472	0/0:7,1:7:12.04:0,12,196	0/0:30,2:29:22.74:0,23,838	0/0:23,0:22:51.16:0,51,802	0/1:7,5:12:99:193,0,105	0/0:4,0:3:6.01:0,6,67	0/1:8,1:9:26.21:26,0,201
chr10	764687	.	T	TAC	341.11	PASS	AB=0.896;AC=7;AF=0.140;AN=50;BaseQRankSum=7.318;DP=572;FS=1.787;HRun=0;HaplotypeScore=144.8906;InbreedingCoeff=0.0515;MQ=44.88;MQ0=37;MQRankSum=-6.102;QD=4.55;ReadPosRankSum=-3.223;VQSLOD=2.6595;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:12,2:12:39.12:39,0,84	0/0:10,0:10:5.28:0,5,181	./.	./.	0/0:22,0:20:45.10:0,45,523	0/0:11,0:10:21:0,21,262	0/0:21,0:21:44.86:0,45,526	0/0:23,0:9:20.90:0,21,240	./.	0/0:31,0:27:58.33:0,58,677	0/0:12,0:11:13.16:0,13,306	0/0:30,0:30:60.63:0,61,677	0/0:30,1:30:44.79:0,45,544	0/0:32,0:29:41.91:0,42,503	0/0:29,0:29:45.15:0,45,562	0/0:15,0:13:26.98:0,27,310	0/1:15,0:13:14.13:14,0,168	0/0:19,0:19:0.05:0,0,408	0/0:18,0:9:24.01:0,24,260	0/1:18,0:17:5.84:6,0,228	0/0:64,4:62:61.11:0,61,1138	0/0:20,0:18:28.17:0,28,293	0/0:15,0:12:26.82:0,27,324	0/0:29,0:24:33.08:0,33,413	0/0:21,0:21:30.72:0,31,491	0/1:9,5:13:84.49:228,0,84	1/1:0,1:1:3.01:48,3,0	0/1:11,2:13:17.69:125,0,18
chr10	764697	.	C	CACAG	183.86	PASS	AB=0.871;AC=6;AF=0.115;AN=52;BaseQRankSum=5.654;DP=609;FS=3.624;HRun=0;HaplotypeScore=169.2277;InbreedingCoeff=0.3651;MQ=45.19;MQ0=50;MQRankSum=-5.720;QD=5.93;ReadPosRankSum=0.913;VQSLOD=2.5061;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:14:5.69:0,6,154	0/0:10,0:10:21.41:0,21,349	./.	./.	0/0:25,0:22:48.13:0,48,828	0/0:16,0:15:36.04:0,36,516	0/0:25,0:23:50.92:0,51,830	0/0:25,0:10:29.99:0,30,438	1/1:2,0:2:2.88:15,3,0	0/0:33,0:29:81.08:0,81,1234	0/0:13,0:12:33.01:0,33,550	0/0:28,0:28:70.06:0,70,1158	0/0:28,0:27:38.59:0,39,871	0/0:38,0:35:71.43:0,71,1003	0/0:31,0:31:62.96:0,63,1023	0/0:22,0:20:42.06:0,42,586	0/0:15,0:13:20.30:0,20,277	0/0:21,0:21:19.48:0,19,697	0/0:15,0:10:27.07:0,27,443	0/0:17,0:17:22.29:0,22,461	0/0:65,0:58:99:0,100,1903	0/0:21,0:19:33.42:0,33,486	0/0:19,0:16:39.54:0,40,594	0/0:26,0:21:37.77:0,38,648	0/0:28,0:27:61.58:0,62,865	0/1:12,1:12:68.86:69,0,175	1/1:3,0:2:1.25:3,1,0	0/1:10,3:13:80.80:199,0,81
chr10	764703	.	TAC	T	175.29	PASS	AB=0.922;AC=8;AF=0.148;AN=54;BaseQRankSum=6.716;DP=615;FS=15.931;HRun=0;HaplotypeScore=142.8951;InbreedingCoeff=0.2586;MQ=44.87;MQ0=49;MQRankSum=-5.481;QD=1.99;ReadPosRankSum=-1.621;VQSLOD=1.6429;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:13,2:16:3.78:63,4,0	0/0:9,0:9:5.87:0,6,262	./.	0/0:27,0:1:1.82:0,2,5	0/0:28,0:25:60.14:0,60,942	0/0:17,0:16:42.14:0,42,682	0/0:24,0:22:34.36:0,34,529	0/0:24,0:10:4.06:0,4,199	0/0:2,0:2:1.25:0,1,3	0/0:37,0:33:45.92:0,46,901	0/0:16,0:15:14.91:0,15,416	0/0:28,1:28:28.77:0,29,912	0/0:27,0:26:29.71:0,30,661	0/0:37,0:33:58.91:0,59,971	0/0:31,0:31:65.73:0,66,1005	0/0:24,0:22:37.52:0,38,578	0/0:10,1:9:12.45:0,12,180	0/1:21,1:22:5.40:5,0,451	0/0:16,0:12:30.02:0,30,428	0/0:16,0:16:27.87:0,28,441	0/0:55,3:52:54.58:0,55,1349	0/1:22,0:20:32.58:33,0,319	0/0:22,0:19:42.17:0,42,598	0/0:27,0:21:32.23:0,32,494	0/0:28,0:27:50.83:0,51,744	0/1:13,0:12:40.17:40,0,79	1/1:2,1:2:3.01:36,3,0	0/1:7,4:11:88.43:122,0,88
chr10	764720	.	AAG	A	604.61	PASS	AB=0.877;AC=9;AF=0.161;AN=56;BaseQRankSum=6.645;DP=684;FS=7.415;HRun=0;HaplotypeScore=137.2701;InbreedingCoeff=-0.1602;MQ=43.95;MQ0=48;MQRankSum=-3.497;QD=3.27;ReadPosRankSum=-0.175;VQSLOD=2.2819;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:7,7:13:10.96:32,0,11	0/0:11,0:11:23.70:0,24,353	0/0:20,0:2:3.01:0,3,31	0/0:40,0:2:6.02:0,6,77	0/0:35,0:31:53.68:0,54,1185	0/0:17,0:15:45.14:0,45,827	0/0:24,0:22:50.43:0,50,801	0/1:27,3:13:99:198,0,267	0/0:1,1:2:1.25:0,1,3	0/1:43,0:37:6.51:7,0,1482	0/0:20,0:19:38.96:0,39,677	0/0:31,0:30:63.29:0,63,1171	0/0:28,0:26:30.42:0,30,814	0/0:43,0:38:24.84:0,25,1336	0/0:31,0:31:77.95:0,78,1418	0/1:22,0:21:42.53:43,0,739	0/1:6,3:9:33.55:34,0,183	0/1:16,1:17:31.94:32,0,515	0/0:22,0:16:48.11:0,48,733	0/1:19,1:20:22.87:23,0,679	0/0:57,0:48:65.14:0,65,1788	0/0:25,1:25:0.11:0,0,711	0/0:24,1:22:54.53:0,55,937	0/0:30,0:24:25.56:0,26,793	0/0:28,0:26:58.79:0,59,957	0/1:11,6:15:32.49:290,0,32	0/0:9,0:7:10.12:0,10,59	0/1:12,1:13:12.68:82,0,13
chr10	764723	.	TACAC	T	640.39	PASS	AB=0.981;AC=9;AF=0.167;AN=54;BaseQRankSum=7.947;DP=690;FS=34.130;HRun=0;HaplotypeScore=157.7813;InbreedingCoeff=0.5204;MQ=44.14;MQ0=44;MQRankSum=-7.371;QD=7.28;ReadPosRankSum=-1.213;VQSLOD=1.4848;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:10,5:14:7.26:77,7,0	0/0:11,0:11:21.05:0,21,469	0/0:21,0:2:5.05:0,5,62	0/0:38,0:2:6.02:0,6,85	0/0:33,0:30:68.55:0,69,1310	0/0:16,0:14:41.87:0,42,891	0/0:24,0:23:46.03:0,46,888	0/1:25,0:10:51.25:51,0,60	./.	0/0:45,0:40:75.31:0,75,2157	0/0:19,0:19:29.89:0,30,704	0/0:33,0:32:74.06:0,74,1652	0/0:28,0:26:68.61:0,69,1298	0/0:43,0:38:86.45:0,86,1854	0/0:35,0:35:77.39:0,77,1632	0/0:23,0:23:30.78:0,31,1008	0/1:9,0:9:11.66:12,0,41	0/0:17,0:17:23.13:0,23,439	0/0:20,0:15:41.82:0,42,780	0/0:20,0:20:49.91:0,50,971	0/0:59,0:49:98.96:0,99,1848	0/0:26,0:25:50.81:0,51,1084	0/0:25,0:22:33.56:0,34,1175	0/0:29,0:24:33.10:0,33,649	0/0:27,0:25:50.79:0,51,1131	0/1:16,1:15:92.99:93,0,121	1/1:3,6:7:15.52:244,16,0	1/1:7,6:13:11.50:310,11,0
chr10	764757	.	CACACAT	C	1001.43	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=6.816;DP=673;FS=32.997;HRun=0;HaplotypeScore=172.0767;InbreedingCoeff=0.8269;MQ=48.41;MQ0=22;MQRankSum=-4.605;QD=10.22;ReadPosRankSum=-3.367;VQSLOD=0.4601;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:14,7:19:11.99:162,12,0	0/0:10,0:10:17.74:0,18,572	0/0:20,0:4:12.04:0,12,301	0/0:31,0:10:26.57:0,27,374	0/0:33,0:31:47.95:0,48,1659	0/0:20,0:19:26.21:0,26,1221	0/0:22,0:21:48.62:0,49,1281	1/1:28,0:21:35.68:257,36,0	1/1:8,0:8:2.68:11,3,0	0/0:54,0:52:99:0,137,4034	0/0:24,0:22:47.97:0,48,1249	0/0:26,0:25:58.44:0,58,1737	0/0:33,0:32:78.01:0,78,2031	0/0:40,0:37:90.29:0,90,2773	0/0:33,0:33:77.22:0,77,2256	0/0:28,0:28:69.14:0,69,1908	1/1:6,1:8:6.49:102,6,0	0/0:16,0:17:39:0,39,837	0/0:23,0:20:60.12:0,60,1373	0/0:20,0:18:48.15:0,48,1346	0/0:35,0:31:49.59:0,50,1529	0/0:27,0:26:59.52:0,60,1455	0/0:32,0:31:66.21:0,66,1975	0/0:19,0:15:30.10:0,30,973	0/0:28,0:26:53.66:0,54,1663	0/1:14,0:12:99:126,0,166	1/1:10,0:9:23.79:260,24,0	1/1:9,0:9:20.80:260,21,0
chr10	764759	.	CACAT	C	1684.48	PASS	AB=0.938;AC=13;AF=0.232;AN=56;BaseQRankSum=6.160;DP=666;FS=36.763;HRun=0;HaplotypeScore=146.4079;InbreedingCoeff=0.8472;MQ=50.56;MQ0=20;MQRankSum=-4.404;QD=16.68;ReadPosRankSum=-4.581;VQSLOD=1.1365;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:19:11.58:91,12,0	0/0:9,0:9:17.71:0,18,425	0/0:21,0:6:18.01:0,18,330	0/0:28,0:10:29.95:0,30,364	0/0:34,0:32:33.20:0,33,1223	0/0:20,0:19:25.98:0,26,955	0/0:21,0:20:49.67:0,50,1027	1/1:6,23:23:57.01:667,57,0	1/1:1,7:8:3.01:57,3,0	0/0:54,0:52:99:0,138,3201	0/0:26,0:24:53.86:0,54,998	0/0:23,0:22:62.98:0,63,1341	0/0:33,0:32:77.62:0,78,1606	0/0:39,0:36:90.29:0,90,2176	0/0:32,0:32:75.52:0,76,1740	0/0:27,0:27:69.12:0,69,1506	1/1:11,0:11:14.56:89,15,0	0/0:16,0:16:20.34:0,20,664	0/0:24,0:21:62.92:0,63,1155	0/0:20,0:18:48.15:0,48,1093	0/0:33,0:30:48.34:0,48,1185	0/0:27,0:26:27.10:0,27,1055	0/0:31,0:30:69.19:0,69,1567	0/0:20,0:16:30.10:0,30,755	0/0:27,0:25:53.87:0,54,1275	0/1:14,1:13:99:252,0,107	1/1:4,6:9:23.79:326,24,0	1/1:2,6:8:21.07:384,21,0
chr10	765530	.	T	TA	237	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-3.800;DP=785;FS=6.033;HRun=8;HaplotypeScore=111.4551;InbreedingCoeff=0.9986;MQ=81.01;MQ0=0;MQRankSum=-0.292;QD=19.75;ReadPosRankSum=-0.586;VQSLOD=2.4728;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,138,1260	1/1:1,11:12:30.05:331,30,0	0/0:23,0:23:38:0,38,327	0/0:24,0:23:29.95:0,30,322	0/0:33,0:33:81.02:0,81,737	0/0:27,0:27:63.01:0,63,572	0/0:29,0:29:81.02:0,81,736	0/0:30,0:30:69.03:0,69,631	0/0:34,0:34:90.03:0,90,819	0/0:28,0:28:66.03:0,66,604	0/0:17,0:18:35.04:0,35,308	0/0:34,0:34:68.53:0,69,790	0/0:36,0:36:99:0,99,906	0/0:38,0:38:99:0,99,906	0/0:44,0:44:99:0,123,1125	0/0:31,0:31:87.02:0,87,790	0/0:23,0:23:60.03:0,60,549	0/0:24,0:24:66.04:0,66,604	0/0:19,0:19:44.99:0,45,402	0/0:18,0:19:47.05:0,47,414	0/0:28,0:28:81.04:0,81,741	0/0:22,0:22:53.99:0,54,488	0/0:29,0:29:68.99:0,69,624	0/0:40,0:40:99:0,105,961	0/0:19,0:19:51.03:0,51,467	0/0:28,0:28:69.02:0,69,631	0/0:31,0:31:93.05:0,93,851	0/0:14,0:14:36.02:0,36,329
chr10	767115	.	GT	G	4146.59	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=11.828;DP=681;FS=2.821;HRun=1;HaplotypeScore=67.1092;InbreedingCoeff=0.9999;MQ=81.95;MQ0=0;MQRankSum=-0.393;QD=38.04;ReadPosRankSum=1.512;VQSLOD=4.3636;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:58:99:0,169,2628	0/0:12,0:12:36.12:0,36,575	0/0:16,0:16:39.06:0,39,546	0/0:22,0:22:49.78:0,50,785	0/0:21,0:21:63.21:0,63,1001	0/0:20,0:20:60.18:0,60,913	0/0:29,0:29:87.27:0,87,1344	1/1:1,15:16:39.07:501,39,0	1/1:1,21:22:63.16:865,63,0	0/0:29,0:29:87.30:0,87,1390	0/0:21,0:21:60.19:0,60,936	0/0:22,0:22:66.23:0,66,1051	0/0:22,0:22:66.21:0,66,1031	0/0:29,0:29:87.30:0,87,1390	0/0:34,0:34:99:0,102,1533	0/0:26,1:27:39.28:0,39,1136	0/0:18,0:18:54.18:0,54,863	0/0:20,0:20:60.20:0,60,956	0/0:22,0:22:66.22:0,66,1048	0/0:26,0:26:72.25:0,72,1142	0/0:47,0:47:99:0,138,2180	0/0:19,0:19:57.15:0,57,856	0/0:15,0:15:45.14:0,45,685	0/0:25,0:25:75.20:0,75,1140	0/0:18,0:18:51.17:0,51,813	1/1:1,31:32:45.32:1191,45,0	1/1:0,27:27:78.26:1086,78,0	1/1:0,12:12:36.12:503,36,0
chr10	771312	.	T	TC	5218.17	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-4.859;DP=684;FS=2.512;HRun=7;HaplotypeScore=71.2516;InbreedingCoeff=0.9993;MQ=90.14;MQ0=0;MQRankSum=-5.107;QD=28.05;ReadPosRankSum=2.292;VQSLOD=5.7160;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,48:53:99:1504,126,0	0/0:19,0:19:51.04:0,51,480	0/0:29,0:29:67.80:0,68,651	0/0:22,0:22:57.96:0,58,517	0/0:20,0:20:45.03:0,45,423	0/0:29,0:29:66.08:0,66,637	0/0:34,0:34:78.10:0,78,747	1/1:4,23:27:69.12:789,69,0	1/1:4,16:20:51.15:607,51,0	0/0:26,0:26:69.07:0,69,656	0/0:13,0:13:30.03:0,30,284	0/0:28,0:28:60.07:0,60,579	0/0:18,0:18:48.04:0,48,450	0/0:18,0:18:48.06:0,48,458	0/0:35,0:35:93.14:0,93,898	0/0:22,1:23:32.84:0,33,585	1/1:5,13:18:33.10:399,33,0	0/0:24,0:24:66:0,66,613	0/0:19,0:19:30.03:0,30,290	0/0:25,0:25:48.06:0,48,463	0/0:29,0:29:72.10:0,72,695	0/0:20,0:20:53.82:0,54,505	0/0:16,0:16:37.64:0,38,391	0/0:26,0:26:72.07:0,72,686	0/0:25,0:25:69.09:0,69,659	1/1:5,18:23:54.17:652,54,0	1/1:5,31:35:81.08:977,81,0	1/1:0,9:9:24.07:290,24,0
chr10	771857	.	G	GGCA	390.86	PASS	AB=0.922;AC=5;AF=0.089;AN=56;BaseQRankSum=5.062;DP=759;DS;FS=2.327;HRun=0;HaplotypeScore=126.1366;InbreedingCoeff=-0.1028;MQ=67.12;MQ0=8;MQRankSum=-2.119;QD=2.06;ReadPosRankSum=-8.413;VQSLOD=0.2608;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:5.50:0,6,992	0/0:12,0:12:33.11:0,33,615	0/0:18,0:17:48.15:0,48,802	0/0:20,0:20:53.77:0,54,950	0/0:29,0:29:78.25:0,78,1423	0/0:18,0:18:48.13:0,48,849	0/0:19,0:19:54.19:0,54,1006	0/0:37,0:31:70:0,70,760	0/1:16,15:45:29.07:29,0,342	0/0:29,0:29:87.30:0,87,1622	0/0:15,0:15:42.09:0,42,737	0/0:23,0:23:69.22:0,69,1255	0/0:21,0:21:60.19:0,60,1086	0/0:20,0:20:60.21:0,60,1118	0/0:28,0:28:84.24:0,84,1481	0/0:24,0:24:72.21:0,72,1242	0/1:47,0:46:84.78:85,0,942	0/0:29,0:29:78.27:0,78,1453	0/0:23,0:23:69.22:0,69,1238	0/0:18,0:18:54.19:0,54,1007	0/0:44,0:44:99:0,126,2308	0/0:9,0:9:24.08:0,24,439	0/0:9,0:9:24.08:0,24,447	0/0:40,0:40:99:0,117,2082	0/0:33,0:33:96.33:0,96,1785	0/1:41,0:36:22.67:23,0,530	0/1:37,0:36:99:298,0,316	0/1:20,0:20:73.80:74,0,238
chr10	774030	.	T	TG	1344.94	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=2.714;DP=752;FS=5.997;HRun=7;HaplotypeScore=78.6841;InbreedingCoeff=0.9958;MQ=70.70;MQ0=1;MQRankSum=-6.368;QD=21.01;ReadPosRankSum=2.138;VQSLOD=3.2243;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:34,1:34:92.26:669,92,0	0/0:7,0:7:18.03:0,18,174	0/0:25,0:22:49.05:0,49,503	0/0:30,0:26:49.92:0,50,498	0/0:19,0:19:48.07:0,48,463	0/0:17,0:17:50.95:0,51,478	0/0:30,0:30:75.11:0,75,724	0/0:41,0:41:93.11:0,93,885	0/0:38,0:38:99:0,105,1008	0/0:30,0:30:75.11:0,75,720	0/0:26,0:26:69.09:0,69,660	0/0:28,0:28:77.98:0,78,732	0/0:31,0:31:90.14:0,90,869	0/0:28,0:28:69.10:0,69,665	0/0:37,0:37:96.15:0,96,927	0/0:30,0:30:77.99:0,78,739	1/1:2,27:29:66.20:797,66,0	0/0:26,0:26:69.10:0,69,666	0/0:24,0:24:66.10:0,66,635	0/0:18,0:18:46.88:0,47,439	0/0:35,0:35:87.10:0,87,827	0/0:24,0:24:68.97:0,69,646	0/0:19,0:19:51.08:0,51,490	0/0:29,0:29:69.09:0,69,660	0/0:27,0:27:69.11:0,69,666	0/0:26,0:26:75.11:0,75,720	0/0:27,0:27:72.11:0,72,695	0/0:16,0:16:42.03:0,42,398
chr10	774031	.	G	GT	1457.83	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-1.544;DP=748;FS=5.015;HRun=1;HaplotypeScore=75.8297;InbreedingCoeff=0.9979;MQ=70.57;MQ0=1;MQRankSum=-3.120;QD=23.14;ReadPosRankSum=3.314;VQSLOD=3.8092;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,34:34:92.90:1356,93,0	0/0:7,0:7:21.06:0,21,277	0/0:25,0:22:62.48:0,62,741	0/0:29,0:25:63.92:0,64,712	0/0:18,0:18:54.15:0,54,696	0/0:17,0:17:51.10:0,51,677	0/0:29,0:29:87.25:0,87,1146	0/0:42,0:42:99:0,120,1477	0/0:40,0:40:99:0,111,1506	0/0:30,0:30:81.24:0,81,1064	0/0:25,0:25:72.20:0,72,965	0/0:28,0:28:84.18:0,84,1081	0/0:31,0:31:93.30:0,93,1269	0/0:29,0:29:84.22:0,84,1062	0/0:36,0:36:99:0,108,1432	0/0:30,0:30:90.19:0,90,1154	1/1:28,0:28:53.99:224,54,0	0/0:25,0:25:75.22:0,75,1007	0/0:25,0:25:72.21:0,72,937	0/0:18,0:18:54.15:0,54,694	0/0:35,0:35:99:0,102,1291	0/0:23,0:23:69.16:0,69,911	0/0:20,0:20:57.17:0,57,757	0/0:27,0:27:78.22:0,78,1010	0/0:28,0:28:81.19:0,81,1055	0/0:26,0:26:78.25:0,78,1061	0/0:26,0:26:78.23:0,78,1048	0/0:16,0:16:48.13:0,48,623
chr10	777093	.	TA	T	1124.82	PASS	AB=0.872;AC=7;AF=0.125;AN=56;BaseQRankSum=8.193;DP=698;FS=1.434;HRun=12;HaplotypeScore=78.3646;InbreedingCoeff=0.5185;MQ=75.58;MQ0=3;MQRankSum=-1.379;QD=8.46;ReadPosRankSum=1.872;VQSLOD=2.9474;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:12,36:50:50.29:722,50,0	0/0:9,1:10:3.82:0,4,220	0/0:31,0:17:19.94:0,20,187	0/0:30,0:20:6.59:0,7,83	0/1:24,3:27:0.92:1,0,506	0/0:27,0:27:69.13:0,69,695	0/0:18,0:18:40.95:0,41,403	0/0:31,0:31:63.11:0,63,629	0/0:4,0:16:31.56:0,32,182	0/0:35,0:35:81.16:0,81,818	0/0:22,1:23:39.83:0,40,555	0/0:19,0:19:44.84:0,45,415	0/0:24,2:26:19.68:0,20,562	0/0:21,1:22:33.71:0,34,504	0/0:25,1:26:29.82:0,30,616	0/0:26,2:28:25.66:0,26,616	1/1:3,22:26:45.72:471,46,0	0/1:12,3:15:56.31:56,0,208	0/0:20,0:20:39.04:0,39,375	0/0:30,0:31:74.72:0,75,731	0/0:17,0:17:36.07:0,36,365	0/0:26,2:29:22.25:0,22,561	0/0:28,0:28:81.15:0,81,816	0/1:13,2:15:7.35:7,0,296	0/0:19,1:20:26.60:0,27,409	0/0:29,0:30:71.91:0,72,693	0/0:36,0:39:92.65:0,93,883	0/0:7,0:7:18.04:0,18,183
chr10	778384	.	GTGTAACAAAGGCC	G	4411.58	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=10.458;DP=786;FS=2.009;HRun=0;HaplotypeScore=273.8527;InbreedingCoeff=0.9827;MQ=90.44;MQ0=1;MQRankSum=-10.054;QD=65.84;ReadPosRankSum=0.547;VQSLOD=3.9635;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,43:43:78.27:3124,78,0	0/0:12,0:12:36.12:0,36,2287	0/0:29,0:28:84.26:0,84,4468	0/0:34,0:34:82.29:0,82,5092	0/0:28,0:28:81.28:0,81,5013	0/0:26,0:25:78.25:0,78,5053	0/0:25,0:25:75.24:0,75,4585	0/0:38,0:38:99:0,114,6405	0/0:22,0:22:66.23:0,66,4484	0/0:40,0:40:99:0,117,7291	0/0:19,0:19:57.20:0,57,3612	0/0:36,0:36:99:0,108,7015	0/0:32,0:32:96.30:0,96,6029	0/0:38,0:38:99:0,114,7175	0/0:32,0:32:96.33:0,96,5879	0/0:36,0:36:99:0,108,6622	1/1:24,0:23:22.16:1288,22,0	0/0:19,0:19:57.20:0,57,3766	0/0:23,0:23:69.22:0,69,4405	0/0:23,0:23:69.24:0,69,4141	0/0:45,0:45:99:0,135,8331	0/0:25,0:25:75.26:0,75,4618	0/0:24,0:24:72.25:0,72,4237	0/0:39,0:39:99:0,117,7723	0/0:22,0:22:63.19:0,63,3697	0/0:28,0:28:81.28:0,81,5137	0/0:20,0:20:60.17:0,60,3462	0/0:4,0:4:12.04:0,12,815
chr10	778385	.	TGTAACAAAGGCCA	T	4188.28	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=10.477;DP=784;FS=2.020;HRun=0;HaplotypeScore=274.1333;InbreedingCoeff=0.9843;MQ=90.93;MQ0=1;MQRankSum=-10.071;QD=62.51;ReadPosRankSum=0.328;VQSLOD=2.9165;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:43,0:43:78.27:2643,78,0	0/0:12,0:12:36.12:0,36,2227	0/0:29,0:28:78.27:0,78,4336	0/0:34,0:35:76.01:0,76,4759	0/0:28,0:28:81.28:0,81,4798	0/0:25,0:24:75.26:0,75,4883	0/0:26,0:26:75.26:0,75,4513	0/0:39,0:39:99:0,108,6085	0/0:22,0:22:66.23:0,66,4379	0/0:39,0:39:99:0,117,6893	0/0:19,0:19:57.20:0,57,3474	0/0:36,0:36:99:0,108,6753	0/0:31,0:31:90.31:0,90,5775	0/0:37,0:37:99:0,111,6955	0/0:32,0:32:96.32:0,96,5567	0/0:34,0:34:99:0,102,6347	1/1:6,18:23:39.13:1545,39,0	0/0:19,0:19:57.20:0,57,3622	0/0:25,0:25:72.25:0,72,4578	0/0:23,0:23:69.24:0,69,3960	0/0:46,0:46:99:0,129,8158	0/0:25,0:25:75.21:0,75,4393	0/0:24,0:24:72.25:0,72,3956	0/0:39,0:39:99:0,117,7502	0/0:21,0:21:57.20:0,57,3504	0/0:27,0:27:81.28:0,81,4877	0/0:20,0:20:54.17:0,54,3258	0/0:4,0:4:12.04:0,12,796
chr10	778926	.	G	GA	490.15	PASS	AB=1.000;AC=4;AF=0.071;AN=56;BaseQRankSum=-2.938;DP=638;FS=20.152;HRun=10;HaplotypeScore=66.2365;InbreedingCoeff=0.4513;MQ=75.69;MQ0=0;MQRankSum=-0.428;QD=8.91;ReadPosRankSum=-5.299;VQSLOD=-0.6348;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:98.82:0,99,810	0/0:16,0:16:41.93:0,42,344	0/1:18,0:18:53.60:54,0,98	0/1:12,0:13:32.63:36,0,33	0/0:39,0:39:95.87:0,96,788	0/0:30,0:30:80.88:0,81,661	0/0:31,0:31:83.88:0,84,690	1/1:5,17:23:32.33:516,32,0	0/0:18,0:18:50.91:0,51,412	0/0:25,0:25:62.90:0,63,517	0/0:12,0:12:29.94:0,30,246	0/0:28,0:30:55.67:0,56,579	0/0:22,0:22:56.92:0,57,468	0/0:28,1:29:21.94:0,22,387	0/0:19,0:19:53.93:0,54,443	0/0:22,0:22:58.96:0,59,474	0/0:33,1:34:57.87:0,58,679	0/0:12,0:12:35.96:0,36,295	0/0:18,0:19:34.97:0,35,277	0/0:18,0:18:13.12:0,13,313	0/0:30,0:30:83.88:0,84,687	0/0:25,0:25:59.92:0,60,493	0/0:20,1:21:18.92:0,19,359	0/0:13,0:13:35.96:0,36,295	0/0:19,2:21:24.94:0,25,411	0/0:25,0:25:71.91:0,72,591	0/0:20,0:20:49.91:0,50,400	0/0:11,0:11:29.96:0,30,246
chr10	780958	.	A	AG	1907.68	PASS	AB=0.741;AC=28;AF=0.500;AN=56;BaseQRankSum=-4.324;DP=540;FS=2.682;HRun=11;HaplotypeScore=98.0304;InbreedingCoeff=-0.4181;MQ=79.21;MQ0=2;MQRankSum=-0.382;QD=4.34;ReadPosRankSum=-0.116;VQSLOD=1.6863;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:42:77.65:0,78,558	1/1:4,1:5:4.25:34,4,0	0/0:22,0:19:5.31:0,5,93	0/0:23,0:22:10:0,10,78	0/1:11,7:18:5.46:133,0,5	0/1:22,7:29:44.70:73,0,45	0/1:8,8:17:3.35:160,0,3	0/1:14,1:15:4.49:10,0,4	0/1:12,11:23:2.51:134,0,3	0/1:14,7:21:12:57,0,12	1/1:5,4:9:1.82:5,2,0	0/1:12,13:26:63.60:123,0,64	0/1:15,8:23:38.88:39,0,49	1/1:15,1:17:0.60:140,1,0	0/1:10,12:22:28.40:104,0,28	0/1:7,12:19:7.61:208,0,8	0/1:13,8:21:22.74:159,0,23	0/1:12,2:15:27.36:58,0,27	1/1:12,5:17:8.59:113,9,0	0/1:12,2:14:10.74:77,0,11	0/1:22,9:30:78.10:86,0,78	0/1:14,6:20:4.98:106,0,5	0/1:13,4:17:9.05:70,0,9	0/1:7,10:17:8.20:107,0,8	0/0:12,1:13:2.95:0,3,20	0/1:9,5:14:18.53:19,0,56	0/1:15,5:21:21.62:22,0,37	0/1:4,5:9:21.50:22,0,35
chr10	784755	.	A	AC	789.51	PASS	AB=0.733;AC=11;AF=0.196;AN=56;BaseQRankSum=5.433;DP=395;FS=0.000;HRun=9;HaplotypeScore=58.8161;InbreedingCoeff=0.6043;MQ=88.52;MQ0=2;MQRankSum=-1.514;QD=9.18;ReadPosRankSum=-3.180;VQSLOD=1.1229;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:44.96:0,45,390	0/0:5,0:5:8.98:0,9,78	0/0:28,0:21:26.44:0,26,192	0/1:33,1:27:28.60:29,0,128	0/0:15,0:15:23.99:0,24,208	0/0:8,0:8:20.93:0,21,171	0/0:10,0:10:23.94:0,24,195	1/1:6,3:8:9.02:100,9,0	0/1:3,5:8:14:87,0,14	0/0:17,0:17:41.93:0,42,350	0/0:11,0:11:11.95:0,12,98	0/0:11,0:11:29.99:0,30,260	0/0:18,0:18:38.43:0,38,316	0/0:13,0:13:35.99:0,36,312	0/0:12,0:12:23.99:0,24,208	0/0:11,0:11:29.97:0,30,256	1/1:3,8:11:23.94:230,24,0	0/0:24,0:24:62.81:0,63,526	0/0:15,1:16:6.04:0,6,270	0/0:19,0:19:47.55:0,48,394	0/0:15,0:15:23.06:0,23,289	0/0:14,0:14:29.84:0,30,247	0/0:11,0:11:29.96:0,30,253	0/0:17,0:17:32.84:0,33,272	0/0:11,1:12:2.66:0,3,235	0/1:4,6:11:2.78:183,0,3	1/1:1,9:11:24.05:258,24,0	1/1:0,2:2:6.02:66,6,0
chr10	786164	.	G	GA	13419.25	PASS	AB=0.800;AC=51;AF=0.944;AN=54;BaseQRankSum=-2.692;DP=360;FS=6.469;HRun=1;HaplotypeScore=107.7713;InbreedingCoeff=0.4825;MQ=53.21;MQ0=0;MQRankSum=-3.413;QD=37.48;ReadPosRankSum=3.017;VQSLOD=4.8013;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,10:11:33.11:494,33,0	1/1:1,8:9:24.08:358,24,0	0/1:6,2:7:38.50:82,0,39	0/0:2,0:2:6:0,6,56	1/1:3,22:25:63.21:931,63,0	1/1:1,10:11:20.21:348,20,0	1/1:2,14:16:40.57:513,41,0	1/1:5,27:32:87.26:1277,87,0	1/1:0,7:7:21.07:314,21,0	1/1:2,14:16:39.10:560,39,0	1/1:1,17:18:54.13:762,54,0	1/1:0,12:12:36.12:539,36,0	1/1:0,8:8:21.07:309,21,0	1/1:0,9:9:27.09:403,27,0	1/1:0,16:16:48.16:718,48,0	1/1:1,4:5:12.04:179,12,0	1/1:2,12:14:39.09:559,39,0	1/1:2,12:14:32.93:489,33,0	1/1:3,12:15:39.08:552,39,0	1/1:2,18:20:60.16:868,60,0	1/1:2,5:7:9.03:135,9,0	1/1:1,5:6:12.04:179,12,0	1/1:4,16:20:40.10:656,40,0	1/1:0,5:5:12.04:180,12,0	1/1:0,18:18:51.17:756,51,0	1/1:1,17:18:48.16:713,48,0	1/1:4,14:18:39.09:547,39,0	./.
chr10	786183	.	G	GT	8358.28	PASS	AB=0.833;AC=49;AF=0.980;AN=50;BaseQRankSum=0.178;DP=318;FS=9.689;HRun=5;HaplotypeScore=128.6270;InbreedingCoeff=-0.0329;MQ=36.33;MQ0=0;MQRankSum=-2.348;QD=26.88;ReadPosRankSum=0.718;VQSLOD=3.1524;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,0:6:8.45:59,8,0	1/1:9,1:10:21.06:244,21,0	0/1:4,1:3:13.68:33,0,14	./.	1/1:15,11:26:47.93:562,48,0	1/1:4,5:9:21.07:267,21,0	1/1:1,12:13:33.11:433,33,0	1/1:14,9:23:49.33:567,49,0	1/1:5,1:6:15.04:179,15,0	1/1:10,5:15:36.55:428,37,0	1/1:9,7:16:39.09:468,39,0	1/1:8,3:11:25.22:266,25,0	1/1:2,4:6:17.98:198,18,0	1/1:6,3:9:24.05:271,24,0	1/1:11,5:16:34.16:368,34,0	1/1:5,1:6:17.89:193,18,0	1/1:11,1:12:17.88:245,18,0	1/1:8,5:13:30.09:366,30,0	1/1:13,4:17:42.06:501,42,0	1/1:7,12:18:44.76:539,45,0	1/1:3,0:3:3.01:34,3,0	1/1:2,3:5:9.03:119,9,0	1/1:8,10:18:42.07:489,42,0	./.	1/1:9,6:15:39.12:496,39,0	1/1:8,8:16:36.12:464,36,0	1/1:6,10:16:48.10:569,48,0	./.
chr10	786188	.	T	TTG	5708.51	PASS	AB=0.970;AC=46;AF=0.885;AN=52;BaseQRankSum=4.349;DP=293;FS=0.000;HRun=0;HaplotypeScore=114.7331;InbreedingCoeff=0.0225;MQ=34.82;MQ0=0;MQRankSum=-1.429;QD=19.82;ReadPosRankSum=7.126;VQSLOD=4.3198;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:4:6.94:49,7,0	1/1:9,1:10:7.37:213,7,0	0/1:4,0:3:24.66:25,0,28	./.	0/1:19,3:22:6.51:348,0,7	1/1:6,3:9:3.40:108,3,0	1/1:13,0:13:21.58:192,22,0	1/1:15,5:20:32.14:405,32,0	1/1:3,2:5:14.72:176,15,0	1/1:14,1:15:10.47:275,10,0	1/1:12,2:14:23.47:299,23,0	1/1:9,1:10:4.84:170,5,0	1/1:6,0:6:7.85:82,8,0	1/1:6,2:8:20.05:194,20,0	1/1:11,2:13:1.09:230,1,0	1/1:4,2:6:17.15:170,17,0	1/1:4,6:10:2.86:319,3,0	1/1:9,3:12:30:368,30,0	1/1:10,3:14:32.40:428,32,0	0/1:20,0:19:18.16:249,0,18	1/1:1,1:2:3.01:32,3,0	0/1:7,0:7:29.26:33,0,29	1/1:16,2:18:15.69:348,16,0	./.	1/1:9,5:14:38.61:346,39,0	1/1:14,1:15:20.87:258,21,0	1/1:12,4:16:43.16:392,43,0	0/0:1,1:2:2.90:0,3,16
chr10	789193	.	GC	G	5725.98	PASS	AC=52;AF=1.000;AN=52;DP=297;FS=0.000;HRun=3;HaplotypeScore=213.1925;InbreedingCoeff=-0.0196;MQ=32.67;MQ0=0;QD=19.28;VQSLOD=3.5994;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,14:14:42.13:499,42,0	1/1:0,8:8:15.05:179,15,0	./.	./.	1/1:3,10:13:15.05:179,15,0	1/1:0,13:13:21.01:235,21,0	1/1:0,13:12:21.06:251,21,0	1/1:1,1:1:3.01:36,3,0	1/1:1,10:11:15.05:179,15,0	1/1:1,13:14:30.09:359,30,0	1/1:1,8:9:12.04:143,12,0	1/1:1,18:19:30.07:359,30,0	1/1:0,16:16:30.09:358,30,0	1/1:0,15:15:18.06:215,18,0	1/1:1,21:22:39.12:466,39,0	1/1:0,11:11:24.07:285,24,0	1/1:0,11:11:9:108,9,0	1/1:1,10:11:18.05:212,18,0	1/1:0,7:7:21.06:251,21,0	1/1:1,5:6:9.03:107,9,0	1/1:1,5:6:3.01:36,3,0	1/1:0,9:9:12.04:143,12,0	1/1:0,11:11:15.05:179,15,0	1/1:0,6:6:2.88:15,3,0	1/1:1,4:5:3.01:36,3,0	1/1:0,14:14:27.08:322,27,0	1/1:1,25:26:38.98:466,39,0	1/1:0,5:5:9.03:108,9,0
chr10	789394	.	GAGA	G	150.58	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.742;DP=416;FS=10.240;HRun=0;HaplotypeScore=56.9222;InbreedingCoeff=0.8937;MQ=51.15;MQ0=8;MQRankSum=1.246;QD=10.76;ReadPosRankSum=-1.711;VQSLOD=1.4709;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:66.17:0,66,1298	0/0:4,0:4:12.04:0,12,241	0/0:11,0:3:9.03:0,9,201	0/0:23,0:10:22.63:0,23,463	0/0:7,0:6:18.02:0,18,354	0/0:12,0:12:33.11:0,33,648	0/0:17,0:17:51.17:0,51,1088	1/1:4,10:9:18.03:241,18,0	0/0:9,0:9:24.08:0,24,534	0/0:15,0:15:39.09:0,39,786	0/0:13,0:12:30.09:0,30,609	0/0:15,0:15:42.11:0,42,873	0/0:15,0:15:42.14:0,42,891	0/0:17,0:17:42.14:0,42,919	0/0:21,0:21:63.22:0,63,1358	0/0:10,0:10:24.08:0,24,507	0/0:20,0:20:57.19:0,57,1223	0/0:11,0:11:30.10:0,30,670	0/0:13,0:13:33.11:0,33,735	0/0:13,0:13:36.12:0,36,769	0/0:40,0:40:99:0,111,2306	0/0:12,0:12:30.05:0,30,581	0/0:8,0:8:24.04:0,24,464	0/0:16,0:16:45.11:0,45,940	0/0:11,0:11:33.11:0,33,737	0/0:12,0:12:33.11:0,33,729	0/0:23,0:23:63.22:0,63,1378	0/0:11,0:11:33.10:0,33,683
chr10	797283	.	GA	G	797.58	PASS	AB=0.842;AC=3;AF=0.054;AN=56;BaseQRankSum=6.987;DP=650;FS=0.000;HRun=9;HaplotypeScore=64.1224;InbreedingCoeff=0.6404;MQ=82.36;MQ0=0;MQRankSum=-3.285;QD=14.50;ReadPosRankSum=-0.579;VQSLOD=3.4309;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,36:39:96.04:878,96,0	0/0:8,0:8:21.05:0,21,232	0/0:29,1:29:53.13:0,53,528	0/1:13,2:15:25.14:25,0,192	0/0:32,0:33:84.96:0,85,941	0/0:15,0:15:42.12:0,42,485	0/0:11,0:11:23.99:0,24,259	0/0:36,0:36:90.21:0,90,995	0/0:31,0:31:87.25:0,87,994	0/0:31,0:32:90.07:0,90,1005	0/0:21,0:21:54.16:0,54,623	0/0:26,0:26:69.20:0,69,788	0/0:14,0:14:39.10:0,39,440	0/0:24,0:24:66.18:0,66,745	0/0:31,0:31:87.25:0,87,994	0/0:12,0:12:36.09:0,36,399	0/0:19,1:20:23.69:0,24,526	0/0:9,0:9:27.03:0,27,285	0/0:23,0:23:54:0,54,582	0/0:21,0:21:63.19:0,63,727	0/0:27,1:28:50.75:0,51,826	0/0:27,0:27:69.20:0,69,796	0/0:31,0:31:84.24:0,84,961	0/0:13,0:13:39.12:0,39,450	0/0:30,0:30:84.24:0,84,960	0/0:27,0:27:72.21:0,72,824	0/0:35,0:34:99:0,102,1167	0/0:7,0:7:18.05:0,18,208
chr10	802231	.	AC	A	2674.92	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.489;DP=738;FS=9.939;HRun=2;HaplotypeScore=65.0348;InbreedingCoeff=0.9753;MQ=53.97;MQ0=32;MQRankSum=0.428;QD=32.23;ReadPosRankSum=1.736;VQSLOD=2.8780;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:45:99:0,102,1521	0/0:9,0:9:27.09:0,27,404	0/0:21,0:3:9.03:0,9,135	0/0:26,0:6:16.93:0,17,179	0/0:35,0:35:90.29:0,90,1330	0/0:22,0:22:57.19:0,57,854	0/0:11,0:10:27.09:0,27,404	0/0:33,0:20:57.19:0,57,853	0/0:19,0:19:51.17:0,51,762	0/0:28,0:27:81.26:0,81,1175	0/0:29,0:28:63.21:0,63,944	0/0:23,0:23:53.78:0,54,807	0/0:22,0:20:53.90:0,54,809	0/0:25,0:25:60.20:0,60,893	0/0:30,0:30:63.21:0,63,943	0/0:26,0:26:69.23:0,69,1025	0/0:27,0:23:39.11:0,39,563	0/0:22,0:20:45.15:0,45,674	0/0:21,0:15:45.13:0,45,650	0/0:38,0:37:99:0,99,1465	0/0:38,0:37:90.30:0,90,1322	0/0:32,0:31:78.26:0,78,1168	0/0:24,0:22:54.17:0,54,790	0/0:24,0:24:60.17:0,60,873	0/0:24,0:24:63.21:0,63,944	1/1:0,28:26:78.25:1013,78,0	1/1:1,37:37:96.28:1228,96,0	1/1:0,17:17:45.14:577,45,0
chr10	806326	.	TGTGGGCGC	T	2188.38	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.772;DP=654;FS=4.506;HRun=0;HaplotypeScore=156.9866;InbreedingCoeff=0.9968;MQ=54.38;MQ0=4;MQRankSum=-8.712;QD=44.66;ReadPosRankSum=-0.890;VQSLOD=3.3969;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,31:36:69.15:1710,69,0	0/0:8,0:8:24.08:0,24,1013	0/0:18,0:11:30.10:0,30,1241	0/0:17,0:10:30.10:0,30,1109	0/0:15,0:14:33.10:0,33,1240	0/0:20,0:20:48.16:0,48,2061	0/0:28,0:28:78.27:0,78,3375	1/1:1,12:9:24.08:599,24,0	0/0:21,0:21:60.21:0,60,2477	0/0:23,0:23:69.21:0,69,2813	0/0:26,0:26:69.23:0,69,2592	0/0:27,0:27:72.23:0,72,3044	0/0:23,0:23:66.23:0,66,2621	0/0:19,0:19:57.17:0,57,2383	0/0:31,0:31:93.29:0,93,3802	0/0:21,0:21:59.99:0,60,2629	0/0:35,0:35:99:0,102,4214	0/0:33,0:33:96.33:0,96,4144	0/0:21,0:19:57.16:0,57,2353	0/0:33,0:33:96.33:0,96,4250	0/0:38,0:38:99:0,105,4464	0/0:25,0:25:69.24:0,69,2926	0/0:16,0:16:33.07:0,33,1252	0/0:20,0:20:60.21:0,60,2655	0/0:18,0:18:36.12:0,36,1577	0/0:26,0:26:78.27:0,78,3410	0/0:32,0:32:96.33:0,96,4083	0/0:11,0:11:30.10:0,30,1332
chr10	808042	.	C	CA	1166.01	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=0.039;DP=678;FS=0.000;HRun=8;HaplotypeScore=69.6284;InbreedingCoeff=0.8047;MQ=69.07;MQ0=11;MQRankSum=-4.009;QD=12.15;ReadPosRankSum=-4.073;VQSLOD=2.0084;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,15:19:39.76:496,40,0	0/0:13,0:13:33.01:0,33,302	0/0:37,0:18:28.33:0,28,241	0/1:45,0:28:7.90:8,0,172	0/0:38,0:38:99:0,105,961	0/0:31,0:31:81.03:0,81,741	0/0:16,0:16:42.02:0,42,384	1/1:11,20:29:69.20:789,69,0	0/0:27,0:27:68.97:0,69,614	0/0:24,0:23:57.01:0,57,516	0/0:30,0:30:84.02:0,84,764	0/0:14,0:14:26.98:0,27,240	0/0:19,0:19:54.02:0,54,494	0/0:19,0:19:57.03:0,57,521	0/0:22,0:22:57.03:0,57,521	0/0:19,0:19:54.03:0,54,494	0/0:24,0:24:51.01:0,51,467	0/0:11,0:11:26.99:0,27,241	0/0:32,1:33:52.42:0,52,733	0/0:30,0:30:81.04:0,81,741	0/0:14,0:14:36.01:0,36,330	0/0:17,0:17:48.02:0,48,439	0/0:21,0:21:57.03:0,57,521	0/0:31,0:31:72.02:0,72,658	0/0:24,0:24:60.01:0,60,545	0/0:32,0:31:81.03:0,81,741	0/0:26,0:26:59.83:0,60,644	0/0:10,0:10:30.02:0,30,275
chr10	808071	.	C	CA	1317.13	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-0.547;DP=668;FS=0.579;HRun=6;HaplotypeScore=71.9678;InbreedingCoeff=0.9782;MQ=72.28;MQ0=5;MQRankSum=-0.041;QD=26.88;ReadPosRankSum=-4.715;VQSLOD=1.8100;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,13:18:42.12:510,42,0	0/0:15,0:15:42.09:0,42,428	0/0:45,0:27:37.67:0,38,437	0/0:41,0:24:10.68:0,11,249	0/0:36,0:36:96.19:0,96,969	0/0:29,0:29:72.15:0,72,727	0/0:11,0:11:30.06:0,30,301	1/1:7,24:29:78.21:929,78,0	0/0:22,0:22:57.10:0,57,567	0/0:29,0:29:75.15:0,75,759	0/0:28,0:28:81.17:0,81,819	0/0:10,0:10:30.07:0,30,306	0/0:17,0:17:48.08:0,48,477	0/0:30,0:30:87.18:0,87,879	0/0:18,0:18:51.09:0,51,508	0/0:18,0:18:51.12:0,51,520	0/0:19,0:19:57.10:0,57,572	0/0:13,0:13:29.75:0,30,305	0/0:35,0:35:93.07:0,93,902	0/0:30,0:30:81.15:0,81,813	0/0:15,0:15:39.06:0,39,389	0/0:20,0:20:54.12:0,54,550	0/0:23,0:23:54.11:0,54,545	0/0:22,0:22:60.07:0,60,585	0/0:19,0:19:54.09:0,54,537	0/0:35,0:35:96.20:0,96,970	0/0:26,0:26:72.13:0,72,721	0/0:13,0:13:39.05:0,39,386
chr10	809687	.	GA	G	416.19	PASS	AB=0.757;AC=1;AF=0.018;AN=56;BaseQRankSum=5.834;DP=757;FS=29.433;HRun=5;HaplotypeScore=70.4078;InbreedingCoeff=-0.0190;MQ=57.88;MQ0=22;MQRankSum=1.677;QD=4.95;ReadPosRankSum=1.918;VQSLOD=-0.6136;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:57,27:77:99:491,0,1563	0/0:9,0:9:24.07:0,24,313	0/0:38,0:8:21.06:0,21,252	0/0:33,0:9:17.96:0,18,199	0/0:14,0:14:39.11:0,39,509	0/0:22,0:22:63.21:0,63,861	0/0:35,0:35:99:0,102,1375	0/0:40,0:36:96.30:0,96,1283	0/0:18,0:18:48.15:0,48,641	0/0:19,0:17:47.86:0,48,600	0/0:14,0:13:27.09:0,27,361	0/0:29,0:29:84.27:0,84,1127	0/0:22,0:21:54.18:0,54,737	0/0:35,0:35:99:0,99,1337	0/0:23,0:23:63.19:0,63,830	0/0:20,2:22:29.16:0,29,767	0/0:42,0:42:99:0,123,1680	0/0:29,0:29:81.25:0,81,1087	0/0:22,0:15:42.14:0,42,575	0/0:16,0:15:39.10:0,39,496	0/0:49,0:48:99:0,132,1740	0/0:14,0:14:39.13:0,39,527	0/0:10,0:9:24.08:0,24,320	0/0:51,0:51:99:0,144,1922	0/0:9,0:9:21.05:0,21,260	0/0:22,0:21:60.18:0,60,789	0/0:27,0:27:75.24:0,75,1006	0/0:9,0:9:24.08:0,24,328
chr10	814674	.	GCA	G	232.38	PASS	AB=0.927;AC=11;AF=0.220;AN=50;BaseQRankSum=0.756;DP=569;FS=0.787;HRun=0;HaplotypeScore=80.3788;InbreedingCoeff=-0.1345;MQ=54.06;MQ0=29;MQRankSum=-0.083;QD=0.96;ReadPosRankSum=0.490;VQSLOD=1.5585;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:35,0:37:19.45:34,0,19	1/1:5,0:5:5.71:29,6,0	./.	./.	0/0:15,0:14:17.97:0,18,180	0/0:17,0:20:6:0,6,68	0/1:30,0:29:93.59:94,0,162	0/0:26,0:22:5.84:0,6,34	0/0:12,0:19:15.03:0,15,184	0/1:24,0:23:20.05:20,0,261	0/0:13,0:10:11.31:0,11,111	0/1:18,7:23:17.35:17,0,139	0/0:13,0:13:2.78:0,3,180	0/0:22,0:22:18.01:0,18,218	0/1:16,6:22:2.35:2,0,318	0/0:19,0:18:6.76:0,7,304	0/0:18,0:18:26.90:0,27,279	0/1:22,1:26:15.96:16,0,296	0/1:17,0:14:7.43:7,0,39	0/0:11,0:11:12.02:0,12,148	0/1:44,0:42:99:132,0,249	0/1:11,0:11:14.04:14,0,87	0/0:13,0:13:14.92:0,15,172	0/0:34,1:34:10.22:0,10,406	0/0:19,0:18:14.85:0,15,312	0/0:14,0:14:12.35:0,12,89	0/0:10,0:9:2.57:0,3,37	./.
chr10	815905	.	AAAC	A	342.74	PASS	AB=0.954;AC=10;AF=0.208;AN=48;BaseQRankSum=6.037;DP=673;FS=1.893;HRun=0;HaplotypeScore=101.3515;InbreedingCoeff=0.4607;MQ=75.68;MQ0=6;MQRankSum=-0.106;QD=2.13;ReadPosRankSum=-0.152;VQSLOD=1.9110;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:20:11.90:84,12,0	0/0:14,0:14:15.05:0,15,250	./.	./.	0/0:18,0:18:21.07:0,21,393	0/1:27,2:29:32.98:33,0,649	0/0:23,0:23:30.10:0,30,554	./.	0/0:26,1:27:0.08:0,0,599	0/0:32,0:31:33.11:0,33,588	0/0:19,0:19:12.04:0,12,195	0/0:33,0:33:51.17:0,51,962	0/0:30,0:30:48.15:0,48,880	0/0:27,2:29:6.10:0,6,753	0/0:33,0:33:57.18:0,57,1044	0/1:28,1:29:2.94:3,0,559	1/1:10,6:16:12.04:156,12,0	0/0:14,0:13:20.43:0,20,335	0/0:17,0:17:12.03:0,12,194	0/0:37,0:37:42.61:0,43,772	0/0:25,0:25:33.11:0,33,602	0/1:25,1:26:2.93:3,0,552	0/0:20,0:20:24.08:0,24,455	0/0:31,1:32:15.13:0,15,902	0/1:19,1:20:8.95:9,0,436	1/1:15,5:20:15.05:195,15,0	0/0:16,0:31:44.88:0,45,611	./.
chr10	818160	.	TA	T	970.69	PASS	AB=0.818;AC=15;AF=0.268;AN=56;BaseQRankSum=5.466;DP=482;FS=5.169;HRun=15;HaplotypeScore=60.7808;InbreedingCoeff=0.1571;MQ=62.66;MQ0=4;MQRankSum=0.903;QD=4.15;ReadPosRankSum=2.918;VQSLOD=0.8651;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:15,17:32:41.55:231,0,42	0/1:4,1:5:7.26:7,0,67	0/0:20,0:14:24.98:0,25,160	0/1:11,0:5:13.46:20,0,13	0/0:18,3:23:22.03:0,22,281	0/1:18,3:21:5.56:6,0,198	0/0:11,0:11:17.82:0,18,136	1/1:12,0:32:8.22:62,8,0	0/0:20,0:20:37.74:0,38,304	0/0:16,1:17:4.71:0,5,160	0/1:15,2:16:18.50:18,0,89	0/0:14,1:15:7.71:0,8,187	0/0:12,0:12:29.91:0,30,242	0/0:10,1:11:4.70:0,5,155	0/0:30,1:32:40.04:0,40,416	0/0:12,0:12:6:0,6,53	1/1:8,11:19:8.88:136,9,0	0/0:19,2:21:22.52:0,23,296	0/1:14,2:15:24.15:24,0,39	0/0:13,2:16:4.72:0,5,160	0/0:9,0:9:23.97:0,24,202	0/0:7,0:7:6:0,6,53	0/1:10,2:12:23.57:24,0,62	0/0:8,0:8:11.98:0,12,100	0/0:13,1:14:0.58:0,1,149	1/1:10,15:25:40.32:255,40,0	0/1:13,13:25:2.54:238,0,3	0/1:9,7:15:2.87:111,0,3
chr10	819644	.	AG	A	1083.57	PASS	AC=44;AF=0.917;AN=48;BaseQRankSum=-3.086;DP=116;FS=0.000;HRun=3;HaplotypeScore=18.1854;InbreedingCoeff=0.2268;MQ=64.72;MQ0=0;MQRankSum=-2.173;QD=10.84;ReadPosRankSum=-1.333;VQSLOD=0.8087;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,0:6:3.01:37,3,0	1/1:2,0:2:0.47:1,0,0	0/0:2,0:2:3.01:0,3,37	0/0:4,0:4:4.93:0,5,14	1/1:0,7:7:9.03:101,9,0	1/1:0,4:4:2.50:9,2,0	1/1:6,0:6:8.92:71,9,0	1/1:1,7:8:19.59:206,20,0	1/1:2,0:2:2.96:19,3,0	1/1:0,8:8:16.32:164,16,0	1/1:0,3:4:3.01:34,3,0	1/1:1,4:5:2.37:8,2,0	1/1:0,1:1:2.50:9,2,0	./.	1/1:1,4:5:6.02:69,6,0	1/1:0,6:6:3.01:32,3,0	1/1:0,7:7:3.01:37,3,0	1/1:0,6:6:9.03:111,9,0	1/1:0,4:4:4.24:39,4,0	./.	1/1:1,3:4:3.01:32,3,0	1/1:3,0:3:2.96:19,3,0	1/1:2,0:2:2.97:20,3,0	./.	./.	1/1:6,0:6:11.37:98,11,0	1/1:0,1:1:3.01:32,3,0	1/1:2,1:3:3.01:37,3,0
chr10	821409	.	TTTAAAAAAAAAAAAAA	T	106	PASS	AC=2;AF=0.037;AN=54;BaseQRankSum=3.229;DP=373;FS=1.566;HRun=0;HaplotypeScore=163.1748;InbreedingCoeff=0.7140;MQ=66.91;MQ0=12;MQRankSum=2.287;QD=13.25;ReadPosRankSum=-3.212;VQSLOD=2.1983;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:4,0:4:12.04:0,12,950	0/0:37,0:11:27.96:0,28,586	0/0:27,0:13:9.77:0,10,377	0/0:20,0:20:60.21:0,60,3982	0/0:21,0:18:54.19:0,54,3137	0/0:4,0:4:12.04:0,12,417	1/1:3,5:7:12.04:192,12,0	0/0:7,0:7:21.07:0,21,945	0/0:13,0:13:39.13:0,39,2108	0/0:11,0:11:33.08:0,33,1851	0/0:8,0:8:21.07:0,21,1435	0/0:8,0:8:21.07:0,21,1232	0/0:11,0:11:33.11:0,33,2317	0/0:14,0:14:42.14:0,42,3232	0/0:10,0:10:30.10:0,30,1918	0/0:23,0:22:63.22:0,63,3624	0/0:11,0:11:33.11:0,33,2100	0/0:10,0:10:30.10:0,30,1759	0/0:9,0:9:24.08:0,24,1352	0/0:5,0:4:12.04:0,12,625	0/0:2,0:2:6.02:0,6,285	0/0:3,0:3:9.03:0,9,478	0/0:5,0:5:15.05:0,15,1094	0/0:15,0:15:45.15:0,45,2652	0/0:27,0:27:75.26:0,75,3572	0/0:21,0:21:63.22:0,63,3832	0/0:38,0:37:99:0,102,6619
chr10	823413	.	C	CT	1222.83	PASS	AB=0.899;AC=17;AF=0.304;AN=56;BaseQRankSum=-2.337;DP=594;FS=6.123;HRun=13;HaplotypeScore=73.4892;InbreedingCoeff=0.1974;MQ=59.26;MQ0=13;MQRankSum=-0.061;QD=3.57;ReadPosRankSum=-0.717;VQSLOD=0.5155;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:5,2:20:17.37:113,17,0	0/0:2,0:2:5.90:0,6,37	0/1:29,1:8:4.38:4,0,37	0/1:21,0:7:3.98:19,0,4	0/0:26,1:27:27.12:0,27,343	0/1:23,4:30:4.64:5,0,234	0/0:21,1:23:55.56:0,56,373	1/1:27,14:38:22.65:445,23,0	0/0:13,0:15:3.85:0,4,98	0/0:13,0:13:14.79:0,15,103	0/1:16,3:20:40.65:41,0,164	0/1:25,1:29:10.29:10,0,278	0/1:20,0:20:9.80:10,0,139	0/1:13,0:13:3.35:3,0,89	0/1:22,2:25:2.25:2,0,261	0/0:24,0:25:40.53:0,41,269	0/0:11,0:12:24.89:0,25,156	0/0:14,0:15:32.63:0,33,225	0/0:20,1:19:9.92:0,10,202	0/0:30,0:31:62.29:0,62,401	0/1:13,0:14:0.44:0,0,134	0/0:15,0:15:7.15:0,7,183	0/0:18,0:18:9.64:0,10,172	0/0:15,0:15:23.65:0,24,151	0/0:15,0:15:6.80:0,7,99	0/1:13,9:22:10.83:176,0,11	0/1:8,23:31:2.12:267,0,2	1/1:6,13:21:28.97:287,29,0
chr10	825888	.	GA	G	418.77	PASS	AB=0.933;AC=8;AF=0.143;AN=56;BaseQRankSum=4.637;DP=510;FS=3.411;HRun=14;HaplotypeScore=69.6746;InbreedingCoeff=0.2991;MQ=53.04;MQ0=8;MQRankSum=-0.076;QD=3.49;ReadPosRankSum=3.501;VQSLOD=0.3318;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:18,20:42:38.17:327,38,0	0/0:6,0:6:3:0,3,28	0/0:9,0:4:1.01:0,1,20	0/0:12,0:4:2.80:0,3,13	0/0:13,1:14:7.32:0,7,200	0/0:13,0:13:7.78:0,8,188	0/0:14,1:16:4.12:0,4,150	0/0:44,1:45:56.90:0,57,614	0/1:18,2:20:2.12:2,0,263	0/0:15,1:15:0.24:0,0,145	0/0:17,0:19:32.18:0,32,321	0/0:11,2:13:6.24:0,6,177	0/0:12,0:13:14.03:0,14,147	0/1:11,0:11:7.75:8,0,52	0/0:21,2:23:24.49:0,24,369	1/1:4,11:17:30.84:197,31,0	0/0:28,0:27:46.37:0,46,407	0/0:31,0:29:53.43:0,53,460	0/1:12,0:12:3.47:3,0,131	0/0:8,0:10:21.63:0,22,161	0/0:9,0:9:18.45:0,18,158	0/0:17,2:19:15.46:0,15,286	0/0:11,0:11:17.96:0,18,155	0/1:14,2:16:13.75:14,0,154	0/0:11,0:12:19.08:0,19,169	0/0:24,1:25:24.44:0,24,359	0/0:23,2:23:23.54:0,24,367	0/0:17,1:19:30.37:0,30,409
chr10	826462	.	G	GC	2070.93	PASS	AB=1.000;AC=7;AF=0.130;AN=54;BaseQRankSum=-9.626;DP=414;FS=9.005;HRun=7;HaplotypeScore=50.6044;InbreedingCoeff=0.7898;MQ=78.02;MQ0=0;MQRankSum=-1.308;QD=19.91;ReadPosRankSum=2.377;VQSLOD=2.5394;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,20:23:48.13:567,48,0	0/0:4,0:4:12.02:0,12,116	0/0:11,0:10:18:0,18,164	0/0:13,0:11:20.86:0,21,176	0/0:11,0:11:24.02:0,24,227	0/0:11,0:11:33.05:0,33,318	0/0:26,0:26:63.08:0,63,602	1/1:5,6:11:8.74:93,9,0	0/0:16,0:16:48.07:0,48,458	0/0:14,0:14:36.04:0,36,342	0/0:4,0:4:11.23:0,11,94	0/0:20,0:20:32.32:0,32,443	0/0:13,0:13:36.06:0,36,347	0/0:14,0:14:36.06:0,36,347	0/0:7,0:7:18.03:0,18,174	0/0:15,0:15:42.07:0,42,405	1/1:6,49:55:99:1545,129,0	0/0:24,0:24:63.02:0,63,588	0/0:13,0:13:33.05:0,33,317	0/0:8,0:8:24.03:0,24,226	0/0:38,0:38:87.03:0,87,819	0/0:8,0:8:24.03:0,24,228	0/0:3,0:3:6.01:0,6,57	0/0:13,0:13:39.04:0,39,368	0/1:14,0:14:3.19:3,0,257	0/0:18,0:18:45.06:0,45,434	0/0:6,0:6:9:0,9,82	./.
chr10	826518	.	GA	G	405.66	PASS	AB=0.975;AC=6;AF=0.107;AN=56;BaseQRankSum=1.632;DP=395;FS=2.834;HRun=14;HaplotypeScore=49.3377;InbreedingCoeff=0.1894;MQ=69.23;MQ0=1;MQRankSum=2.621;QD=5.34;ReadPosRankSum=1.071;VQSLOD=1.8075;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:17,20:36:73.67:493,74,0	0/0:1,0:3:5.84:0,6,42	0/0:9,0:6:7.81:0,8,54	0/1:8,0:5:3.89:4,0,19	0/0:7,0:8:10.08:0,10,69	0/1:11,0:14:4.86:5,0,127	0/0:26,5:32:6.77:0,7,482	0/0:4,0:14:24.95:0,25,160	0/0:18,0:18:26.98:0,27,235	0/0:15,0:15:14.85:0,15,126	0/0:3,0:4:8.84:0,9,66	0/0:20,1:21:30.40:0,30,404	0/0:10,0:10:14.99:0,15,128	0/0:14,0:14:12.21:0,12,231	0/0:7,0:7:17.97:0,18,151	0/1:8,1:9:2.58:3,0,114	0/0:42,2:47:25.88:0,26,629	0/0:21,0:21:50.92:0,51,443	0/0:4,0:5:11.91:0,12,97	0/0:3,0:3:9:0,9,79	0/0:22,2:25:12.64:0,13,370	0/0:9,1:10:3.40:0,3,166	0/1:8,0:8:11.46:11,0,40	0/0:16,1:17:27.43:0,27,381	0/0:7,0:7:12.01:0,12,111	0/0:14,1:17:9.22:0,9,203	0/0:10,0:10:30.01:0,30,273	0/0:1,0:1:2.99:0,3,24
chr10	827549	.	GGAAT	G	674.68	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.064;DP=674;FS=1.073;HRun=0;HaplotypeScore=109.3182;InbreedingCoeff=0.9977;MQ=77.50;MQ0=0;MQRankSum=-6.141;QD=37.48;ReadPosRankSum=-0.076;VQSLOD=3.7086;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,18:18:39.07:770,39,0	0/0:12,0:12:36.09:0,36,903	0/0:35,0:35:99:0,105,2834	0/0:16,0:16:47.19:0,47,1270	0/0:24,0:24:72.25:0,72,2059	0/0:28,0:28:84.29:0,84,2361	0/0:20,0:20:60.21:0,60,1630	0/0:32,0:32:93.27:0,93,2446	0/0:16,0:16:48.16:0,48,1391	0/0:30,0:30:90.30:0,90,2478	0/0:23,0:23:69.24:0,69,1957	0/0:31,0:31:93.32:0,93,2638	0/0:15,0:15:45.15:0,45,1265	0/0:26,0:26:78.27:0,78,2245	0/0:36,0:36:99:0,108,3025	0/0:30,0:30:90.31:0,90,2558	0/0:22,0:22:66.22:0,66,1851	0/0:20,0:20:60.21:0,60,1722	0/0:15,0:15:45.15:0,45,1299	0/0:29,0:29:84.27:0,84,2321	0/0:32,0:32:96.31:0,96,2672	0/0:26,0:26:78.27:0,78,2226	0/0:33,0:33:99:0,99,2756	0/0:20,0:20:60.21:0,60,1702	0/0:19,0:19:57.20:0,57,1652	0/0:23,0:22:69.23:0,69,1859	0/0:35,0:35:99:0,105,2870	0/0:8,0:8:24.08:0,24,684
chr10	827599	.	TAG	T	894.86	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.806;DP=687;FS=0.000;HRun=0;HaplotypeScore=83.8513;InbreedingCoeff=0.9969;MQ=78.28;MQ0=0;MQRankSum=-0.811;QD=38.91;ReadPosRankSum=-3.317;VQSLOD=4.1193;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:75.26:0,75,1519	0/0:12,0:12:36.12:0,36,732	0/0:19,0:18:51.63:0,52,960	0/0:12,0:12:27.79:0,28,454	0/0:30,0:30:90.31:0,90,1801	0/0:26,0:26:78.25:0,78,1523	0/0:13,0:13:39.13:0,39,769	1/1:0,23:23:69.19:990,69,0	0/0:30,0:30:90.31:0,90,1803	0/0:29,0:29:87.28:0,87,1712	0/0:24,0:24:72.25:0,72,1463	0/0:41,0:41:99:0,123,2472	0/0:20,0:20:60.19:0,60,1144	0/0:22,0:22:66.23:0,66,1310	0/0:34,0:34:99:0,102,2073	0/0:32,0:32:96.27:0,96,1865	0/0:22,0:22:66.20:0,66,1284	0/0:17,0:17:51.18:0,51,1035	0/0:18,0:18:51.17:0,51,1010	0/0:28,0:28:81.28:0,81,1634	0/0:32,0:32:96.33:0,96,1937	0/0:28,0:28:81.28:0,81,1645	0/0:27,0:27:81.28:0,81,1635	0/0:17,0:17:51.18:0,51,1025	0/0:29,0:29:87.26:0,87,1683	0/0:34,0:33:99:0,102,2057	0/0:35,0:35:99:0,105,2121	0/0:8,0:8:24.08:0,24,460
chr10	828329	.	T	TTTTG	1471.91	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=-4.226;DP=698;FS=0.000;HRun=0;HaplotypeScore=112.8690;InbreedingCoeff=0.7102;MQ=62.37;MQ0=4;MQRankSum=0.148;QD=18.17;ReadPosRankSum=-1.305;VQSLOD=3.0223;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,19:25:36.12:847,36,0	0/0:8,0:8:21.05:0,21,300	0/0:29,0:21:20.01:0,20,181	0/0:32,0:21:20:0,20,208	0/0:35,0:34:93.14:0,93,1324	0/0:24,0:24:57.08:0,57,753	0/0:19,0:19:45.12:0,45,681	1/1:33,0:32:51.04:476,51,0	0/0:27,0:27:69.19:0,69,1100	0/0:18,0:17:36.09:0,36,512	0/0:19,0:19:54.11:0,54,762	0/0:27,0:27:66.11:0,66,926	0/0:23,0:23:66.06:0,66,848	0/0:16,0:16:42.07:0,42,578	0/0:29,0:29:75.18:0,75,1097	0/0:19,0:19:25.11:0,25,586	0/1:23,0:23:99:278,0,146	0/0:15,0:15:2.03:0,2,275	0/0:36,0:35:58.19:0,58,756	0/0:30,0:30:60.94:0,61,730	0/0:22,0:22:54.17:0,54,877	0/0:30,0:30:68.11:0,68,843	0/0:27,0:27:70.78:0,71,916	0/0:27,0:27:71.94:0,72,890	0/0:26,0:26:60.14:0,60,873	0/0:30,0:30:72.15:0,72,969	0/0:37,0:36:90.05:0,90,1124	0/0:12,0:12:26.99:0,27,296
chr10	828342	.	T	TTTGG	1116.89	PASS	AB=1.000;AC=6;AF=0.107;AN=56;BaseQRankSum=0.429;DP=712;FS=11.376;HRun=0;HaplotypeScore=114.9734;InbreedingCoeff=0.2396;MQ=58.63;MQ0=7;MQRankSum=-0.065;QD=8.40;ReadPosRankSum=-1.027;VQSLOD=1.9960;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:25:70.03:511,0,70	0/0:8,0:8:18.05:0,18,267	0/0:26,0:16:8.96:0,9,72	0/0:36,0:20:17.98:0,18,151	0/0:42,0:41:84.21:0,84,1198	0/0:24,0:24:42.12:0,42,609	0/0:19,0:19:45.12:0,45,652	0/0:31,0:30:29.96:0,30,260	0/0:30,0:30:80.43:0,80,1139	0/0:17,0:16:36.07:0,36,471	0/0:20,0:20:45.09:0,45,649	0/0:29,0:29:69.14:0,69,922	0/0:26,0:26:51.12:0,51,722	0/0:16,0:16:30.09:0,30,458	0/0:29,0:29:66.17:0,66,963	0/0:17,0:17:36.10:0,36,528	1/1:11,14:27:21.07:504,21,0	0/0:11,0:11:23.76:0,24,296	0/0:34,0:32:45.06:0,45,649	0/0:29,0:29:45.08:0,45,580	0/0:25,0:25:72.15:0,72,973	0/0:27,0:27:48.14:0,48,703	0/0:30,0:30:60.11:0,60,819	0/0:28,0:28:45.11:0,45,668	0/0:25,0:25:57.12:0,57,797	0/1:33,0:33:99:119,0,284	0/1:36,0:35:59.06:59,0,346	0/1:12,0:12:53.07:53,0,66
chr10	829706	.	G	GC	540	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-6.064;DP=674;FS=3.425;HRun=2;HaplotypeScore=61.8618;InbreedingCoeff=0.9965;MQ=78.08;MQ0=2;MQRankSum=0.288;QD=20.77;ReadPosRankSum=-2.949;VQSLOD=2.8827;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:96.29:0,96,1176	0/0:14,0:14:42.13:0,42,521	0/0:25,0:25:66.18:0,66,812	0/0:15,0:14:39.10:0,39,466	0/0:31,0:31:90.27:0,90,1103	0/0:42,0:42:99:0,120,1442	0/0:10,0:10:27.08:0,27,335	1/1:3,23:18:48.12:635,48,0	0/0:19,0:19:54.16:0,54,656	0/0:35,0:35:99:0,99,1214	0/0:25,0:25:74.04:0,74,896	0/0:40,0:40:99:0,120,1471	0/0:18,0:18:54.17:0,54,669	0/0:23,0:23:69.20:0,69,842	0/0:19,0:19:57.18:0,57,706	0/0:22,0:22:63.19:0,63,770	0/0:15,0:15:42.13:0,42,520	0/0:12,0:12:33.07:0,33,392	0/0:21,0:21:54.15:0,54,638	0/0:42,0:42:99:0,120,1475	0/0:26,0:26:78.22:0,78,952	0/0:35,0:35:99:0,99,1204	0/0:28,0:28:84.25:0,84,1027	0/0:16,0:16:45.14:0,45,558	0/0:31,0:31:87.26:0,87,1064	0/0:22,0:22:63.20:0,63,781	0/0:21,0:20:63.16:0,63,763	0/0:8,0:8:24.03:0,24,257
chr10	830665	.	TTG	T	1128.27	PASS	AB=0.929;AC=43;AF=0.896;AN=48;BaseQRankSum=-0.140;DP=579;FS=0.000;HRun=0;HaplotypeScore=81.8875;InbreedingCoeff=0.2178;MQ=58.19;MQ0=35;MQRankSum=2.336;QD=2.59;ReadPosRankSum=1.570;VQSLOD=1.3110;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	1/1:7,0:10:11.70:91,12,0	./.	./.	1/1:27,2:28:3.01:32,3,0	1/1:15,0:14:5.96:44,6,0	0/0:20,0:20:2.94:0,3,43	./.	1/1:14,0:19:5.68:28,6,0	0/1:24,0:26:2.64:26,0,3	1/1:12,0:17:2.84:14,3,0	1/1:16,0:16:11.83:98,12,0	0/0:17,0:16:5.69:0,6,52	1/1:15,3:18:5.69:43,6,0	1/1:14,4:19:6.02:63,6,0	1/1:23,2:29:11.70:91,12,0	1/1:25,0:23:2.83:14,3,0	1/1:23,0:21:14.57:154,15,0	1/1:15,0:15:5.34:22,5,0	1/1:16,0:17:2.98:21,3,0	1/1:26,1:23:1.16:56,1,0	1/1:8,6:15:11.46:108,11,0	1/1:11,7:17:9.02:95,9,0	1/1:18,0:22:5.68:28,6,0	1/1:16,3:17:9.02:95,9,0	1/1:21,0:20:2.98:21,3,0	1/1:15,0:15:5.85:45,6,0	1/1:9,2:8:5.85:45,6,0
chr10	836354	.	AT	A	1011.02	PASS	AB=0.729;AC=12;AF=0.214;AN=56;BaseQRankSum=7.410;DP=568;FS=2.568;HRun=14;HaplotypeScore=63.2126;InbreedingCoeff=0.7235;MQ=68.54;MQ0=0;MQRankSum=0.187;QD=7.49;ReadPosRankSum=3.719;VQSLOD=2.7834;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,23:29:37.50:359,38,0	0/0:8,1:10:3.28:0,3,161	0/1:12,1:12:2.96:3,0,103	0/0:12,0:12:5.17:0,5,75	0/0:23,2:25:11.42:0,11,373	0/0:25,0:27:56.90:0,57,516	0/0:13,0:17:20.86:0,21,182	0/0:13,0:27:49.70:0,50,299	0/1:1,10:11:1.05:138,0,1	0/0:19,1:20:4.06:0,4,315	0/0:38,0:38:99:0,99,892	0/0:20,2:22:12.79:0,13,376	0/0:19,1:20:30.15:0,30,390	0/0:14,0:14:29.97:0,30,265	0/0:21,2:24:0.73:0,1,276	0/0:13,1:15:18.29:0,18,297	1/1:4,0:22:32.57:94,33,0	0/0:22,1:23:21.41:0,21,328	0/0:16,1:19:21.14:0,21,315	0/0:25,2:28:7.56:0,8,478	0/0:11,0:11:30.02:0,30,275	0/0:14,1:16:18.30:0,18,296	0/0:23,1:24:26.47:0,26,347	0/0:16,0:15:30.03:0,30,279	0/0:23,0:23:61.59:0,62,549	1/1:11,12:24:31.61:211,32,0	1/1:8,17:24:22.06:265,22,0	1/1:4,5:10:18.91:114,19,0
chr10	837604	.	CT	C	721.81	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.981;DP=678;FS=0.779;HRun=5;HaplotypeScore=67.9884;InbreedingCoeff=0.9744;MQ=73.96;MQ0=0;MQRankSum=-1.265;QD=25.78;ReadPosRankSum=0.772;VQSLOD=3.2548;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,26:28:72.20:817,72,0	0/0:6,0:6:18.06:0,18,246	0/0:19,0:19:46.37:0,46,540	0/0:8,0:8:14.98:0,15,175	0/0:25,0:25:75.25:0,75,1025	0/0:24,0:24:63.21:0,63,862	0/0:25,0:25:69.23:0,69,944	0/0:36,0:36:99:0,99,1334	0/0:24,0:24:72.24:0,72,985	0/0:30,0:29:87.27:0,87,1160	0/0:16,0:16:45.15:0,45,615	0/0:20,0:20:57.19:0,57,780	0/0:31,0:31:81.25:0,81,1080	0/0:14,0:14:42.13:0,42,558	0/0:41,0:41:99:0,123,1664	0/0:34,0:34:90.30:0,90,1220	0/0:37,0:37:99:0,108,1417	0/0:13,0:13:36.08:0,36,471	0/0:19,0:19:57.18:0,57,764	0/0:38,0:38:99:0,99,1337	0/0:8,0:8:24.08:0,24,328	0/0:24,0:24:72.23:0,72,969	0/0:34,0:34:99:0,99,1320	0/0:14,0:14:39.13:0,39,534	0/0:26,0:26:78.25:0,78,1049	0/0:30,0:30:90.28:0,90,1203	0/0:36,0:36:99:0,99,1348	0/0:18,0:18:54.18:0,54,735
chr10	839027	.	G	GT	1615.10	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-9.628;DP=689;FS=3.795;HRun=9;HaplotypeScore=67.3252;InbreedingCoeff=0.9747;MQ=75.55;MQ0=0;MQRankSum=-0.658;QD=19.00;ReadPosRankSum=-1.272;VQSLOD=3.5556;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:5,30:36:72.03:778,72,0	0/0:6,0:6:16.81:0,17,135	0/0:25,0:25:56.82:0,57,474	0/0:14,0:15:43.78:0,44,363	0/0:51,1:52:99:0,108,1165	0/0:30,0:30:83.97:0,84,729	0/0:19,0:19:50.99:0,51,443	1/1:18,30:48:70.15:959,70,0	0/0:21,0:21:47.96:0,48,417	0/0:45,0:45:99:0,108,933	0/0:18,1:19:23.81:0,24,436	0/0:23,0:23:59.96:0,60,521	0/0:24,0:24:62.96:0,63,542	0/0:24,0:25:55.99:0,56,475	0/0:19,0:19:50.98:0,51,443	0/0:32,0:32:86.94:0,87,748	0/0:25,0:25:62.93:0,63,537	0/0:21,1:22:20.78:0,21,409	0/0:16,0:16:44.96:0,45,386	0/0:22,0:22:53.97:0,54,468	0/0:12,0:12:29.99:0,30,260	0/0:20,0:20:50.97:0,51,443	0/0:30,0:31:53.76:0,54,671	0/0:22,1:23:32.76:0,33,506	0/0:19,0:19:41.95:0,42,365	0/0:21,1:22:26.81:0,27,461	0/0:32,1:33:53.78:0,54,696	0/0:4,0:4:12:0,12,104
chr10	839310	.	A	AT	773.39	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-5.090;DP=663;FS=7.734;HRun=8;HaplotypeScore=61.3572;InbreedingCoeff=0.9940;MQ=79.40;MQ0=0;MQRankSum=-0.677;QD=19.33;ReadPosRankSum=-5.006;VQSLOD=1.7535;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:96.02:0,96,873	0/0:9,0:9:21.01:0,21,192	0/0:22,0:22:38.16:0,38,367	0/0:16,0:16:25.55:0,26,223	0/0:43,0:43:99:0,110,994	0/0:33,0:33:90.05:0,90,823	0/0:15,0:15:45:0,45,402	1/1:13,27:39:78.18:868,78,0	0/0:22,0:22:60.01:0,60,544	0/0:31,0:31:89.99:0,90,814	0/0:25,0:25:63.03:0,63,576	0/0:24,0:24:69.04:0,69,631	0/0:28,0:28:78.02:0,78,708	0/0:31,0:31:75:0,75,678	0/0:24,0:24:66.01:0,66,599	0/0:26,0:26:69.03:0,69,631	0/0:20,0:20:60.03:0,60,549	0/0:12,0:12:36.02:0,36,329	0/0:20,0:20:51:0,51,463	0/0:18,0:18:48.02:0,48,439	0/0:13,0:13:39.02:0,39,357	0/0:15,0:15:39.01:0,39,357	0/0:16,0:16:39.02:0,39,357	0/0:18,0:18:54.01:0,54,489	0/0:25,0:25:69.01:0,69,627	0/0:29,0:29:78.02:0,78,711	0/0:36,0:36:99:0,102,924	0/0:17,0:17:39.01:0,39,357
chr10	843468	.	TAAA	T	935.20	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=6.708;DP=487;FS=6.851;HRun=7;HaplotypeScore=61.8794;InbreedingCoeff=0.9849;MQ=62.74;MQ0=6;MQRankSum=-1.187;QD=18.70;ReadPosRankSum=-1.345;VQSLOD=-0.2099;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,9:10:15.05:229,15,0	0/0:12,0:12:33.11:0,33,738	0/0:14,0:14:42.14:0,42,876	0/0:7,0:7:21.07:0,21,439	0/0:17,0:17:45.15:0,45,1005	0/0:27,0:27:81.28:0,81,1810	0/0:18,0:18:51.16:0,51,1091	1/1:1,27:17:42.13:614,42,0	0/0:9,0:9:24.08:0,24,536	0/0:23,0:23:63.21:0,63,1351	0/0:16,0:16:48.16:0,48,1073	0/0:13,0:13:30.10:0,30,657	0/0:16,0:16:45.15:0,45,992	0/0:17,0:17:48.16:0,48,1047	0/0:18,0:18:51.18:0,51,1140	0/0:19,0:19:54.16:0,54,1161	1/1:1,9:7:15.05:230,15,0	0/0:27,0:27:78.25:0,78,1666	0/0:9,0:9:24.08:0,24,536	0/0:36,0:36:99:0,99,2182	0/0:11,0:11:30.10:0,30,657	0/0:19,0:19:54.15:0,54,1083	0/0:19,0:19:57.20:0,57,1240	0/0:15,0:15:36.12:0,36,803	0/0:22,0:22:60.20:0,60,1300	0/0:11,0:11:30.10:0,30,670	0/0:29,0:29:81.28:0,81,1810	0/0:13,0:13:39.13:0,39,872
chr10	846548	.	G	GC	1708.89	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-8.660;DP=580;FS=2.872;HRun=0;HaplotypeScore=55.1934;InbreedingCoeff=0.9521;MQ=81.17;MQ0=0;MQRankSum=-2.759;QD=43.82;ReadPosRankSum=-5.140;VQSLOD=1.8055;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:69.19:0,69,942	0/0:9,0:9:27.09:0,27,378	0/0:21,0:21:47.85:0,48,701	0/0:13,0:13:33.05:0,33,430	0/0:26,0:26:78.26:0,78,1090	0/0:23,0:23:66.21:0,66,905	0/0:14,0:14:42.14:0,42,587	1/1:0,39:39:99:1804,117,0	0/0:17,0:17:51.17:0,51,713	0/0:27,0:27:81.27:0,81,1119	0/0:34,0:34:99:0,99,1383	0/0:18,0:18:54.17:0,54,738	0/0:23,0:23:66.22:0,66,922	0/0:19,0:19:57.16:0,57,769	0/0:24,0:24:72.22:0,72,973	0/0:21,0:21:63.20:0,63,863	0/0:14,0:14:42.14:0,42,587	0/0:28,0:28:84.28:0,84,1167	0/0:11,0:11:10.27:0,10,397	0/0:33,0:33:99:0,99,1367	0/0:17,0:17:51.17:0,51,711	0/0:17,0:17:51.17:0,51,712	0/0:17,0:17:51.17:0,51,712	0/0:7,0:7:21.06:0,21,276	0/0:26,0:26:78.26:0,78,1090	0/0:27,0:27:81.27:0,81,1133	0/0:21,0:21:63.20:0,63,863	0/0:11,0:11:33.11:0,33,461
chr10	848318	.	AAC	A	144.32	PASS	AB=0.980;AC=15;AF=0.300;AN=50;BaseQRankSum=0.245;DP=591;FS=23.026;HRun=0;HaplotypeScore=82.9393;InbreedingCoeff=0.1259;MQ=66.21;MQ0=14;MQRankSum=0.490;QD=0.56;ReadPosRankSum=-2.216;VQSLOD=-0.1098;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:37,0:37:11.10:67,11,0	0/0:10,0:10:5.99:0,6,66	./.	./.	0/1:14,2:15:19.70:20,0,96	1/1:11,0:11:8.73:58,9,0	0/1:24,0:21:9.17:9,0,63	0/0:22,0:22:0.89:0,1,2	1/1:20,2:22:3.01:32,3,0	./.	0/0:16,0:16:6.02:0,6,86	0/1:27,0:26:39.23:39,0,46	0/0:22,0:22:10.83:0,11,136	0/0:15,0:15:2.49:0,2,6	0/0:27,0:27:3.01:0,3,40	0/0:20,0:20:15.33:0,15,167	0/1:29,0:29:5.53:6,0,182	0/0:18,0:13:11.25:0,11,126	0/1:13,0:12:14.57:15,0,22	0/1:23,0:23:18.09:18,0,19	0/1:37,1:37:13.69:14,0,180	0/0:20,0:20:18.06:0,18,251	0/0:17,0:17:3.01:0,3,35	0/0:30,0:28:9.03:0,9,114	1/1:17,0:16:2.80:13,3,0	0/0:23,0:23:20.89:0,21,187	0/0:14,0:14:8.95:0,9,85	0/0:4,0:4:5.99:0,6,49
chr10	850034	.	A	AAGG	1574.49	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-7.254;DP=835;FS=0.720;HRun=0;HaplotypeScore=111.5068;InbreedingCoeff=0.9989;MQ=84.18;MQ0=0;MQRankSum=-1.602;QD=50.79;ReadPosRankSum=-3.945;VQSLOD=4.6565;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,129,2045	0/0:12,0:12:36.04:0,36,580	0/0:39,0:39:99:0,111,1633	0/0:36,0:35:81.14:0,81,1347	0/0:21,0:21:60.03:0,60,907	0/0:27,0:27:75.26:0,75,1262	0/0:28,0:28:84.29:0,84,1417	1/1:4,27:31:81.23:1669,81,0	0/0:30,0:30:87.27:0,87,1422	0/0:42,0:42:99:0,117,1903	0/0:32,0:32:84.20:0,84,1267	0/0:36,0:36:99:0,99,1612	0/0:32,0:32:96.31:0,96,1578	0/0:33,0:33:93.27:0,93,1457	0/0:46,0:46:99:0,135,2243	0/0:35,0:35:99:0,99,1573	0/0:25,0:25:69.21:0,69,1109	0/0:18,0:18:51.17:0,51,853	0/0:27,0:27:81.24:0,81,1246	0/0:30,0:30:90.28:0,90,1467	0/0:24,0:24:69.21:0,69,1120	0/0:39,0:39:99:0,108,1807	0/0:26,0:26:78.21:0,78,1289	0/0:26,0:26:72.22:0,72,1167	0/0:20,0:20:54.17:0,54,893	0/0:27,0:27:81.27:0,81,1358	0/0:34,0:34:99:0,102,1643	0/0:10,0:9:27.09:0,27,435
chr10	852549	.	AT	A	1425.33	PASS	AB=0.911;AC=16;AF=0.286;AN=56;BaseQRankSum=9.664;DP=461;FS=3.814;HRun=13;HaplotypeScore=52.8257;InbreedingCoeff=0.8195;MQ=61.34;MQ0=4;MQRankSum=-0.102;QD=7.75;ReadPosRankSum=0.848;VQSLOD=2.2759;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,0:36:47.75:151,48,0	0/0:6,0:6:12.02:0,12,117	0/0:9,0:3:5.74:0,6,38	0/0:7,0:4:4.31:0,4,43	0/0:21,0:22:44.22:0,44,455	0/0:12,1:12:8.14:0,8,241	0/0:9,0:9:15.02:0,15,146	1/1:5,0:22:28.18:80,28,0	1/1:3,10:13:20.87:153,21,0	0/0:20,0:20:42.07:0,42,409	0/0:19,1:20:17.14:0,17,324	0/0:19,0:19:41.66:0,42,389	0/0:11,0:11:33.02:0,33,305	0/0:11,0:13:29.69:0,30,249	0/0:18,1:19:20.15:0,20,353	0/0:12,1:13:8.09:0,8,231	1/1:4,18:25:56.79:390,57,0	0/0:22,0:23:58.95:0,59,540	0/1:17,2:18:1.76:2,0,307	0/0:12,0:12:21.01:0,21,197	0/0:18,0:19:39.67:0,40,346	0/1:10,1:11:0.87:1,0,154	0/0:9,0:9:18.03:0,18,175	0/0:12,0:12:29.20:0,29,281	0/0:19,0:19:48.08:0,48,467	1/1:6,13:20:40.72:290,41,0	1/1:2,14:15:40.80:288,41,0	1/1:2,14:16:19:262,19,0
chr10	855782	.	TA	T	349.46	PASS	AB=0.879;AC=6;AF=0.107;AN=56;BaseQRankSum=2.635;DP=464;FS=3.041;HRun=13;HaplotypeScore=51.8078;InbreedingCoeff=0.4098;MQ=63.53;MQ0=4;MQRankSum=2.550;QD=5.64;ReadPosRankSum=-0.502;VQSLOD=1.6863;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,10:12:0.63:168,1,0	0/0:10,0:12:23.51:0,24,174	0/0:12,0:8:11.58:0,12,102	0/0:12,1:8:10.40:0,10,59	0/1:20,4:24:20.60:21,0,386	0/0:18,0:18:42.07:0,42,409	0/0:5,0:5:12.02:0,12,117	1/1:4,13:16:38.65:274,39,0	0/0:14,0:14:33.05:0,33,320	0/0:28,1:29:41.14:0,41,552	0/0:21,2:23:10.26:0,10,418	0/0:16,0:17:31.29:0,31,295	0/0:9,2:12:1.95:0,2,156	0/0:21,1:22:33.47:0,33,477	0/0:17,1:18:23.17:0,23,387	0/0:19,0:19:44.95:0,45,413	0/0:6,0:17:31.74:0,32,201	0/0:17,0:16:45.01:0,45,421	0/0:7,0:7:15.02:0,15,146	0/0:15,1:19:7.25:0,7,319	0/0:4,0:4:2.84:0,3,14	0/0:16,0:16:42.06:0,42,402	0/0:11,0:11:30.02:0,30,282	0/1:8,1:9:3.93:4,0,118	0/0:34,0:36:63.71:0,64,692	0/0:15,1:16:17.15:0,17,327	0/0:24,0:24:53.96:0,54,486	0/0:19,0:18:26.16:0,26,276
chr10	856515	.	C	CTG	2186.71	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-10.029;DP=625;FS=5.655;HRun=0;HaplotypeScore=71.7035;InbreedingCoeff=0.9836;MQ=73.31;MQ0=0;MQRankSum=-1.603;QD=47.54;ReadPosRankSum=-3.815;VQSLOD=3.5114;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,108,1626	0/0:6,0:6:15.05:0,15,230	0/0:15,0:15:35.98:0,36,483	0/0:14,0:13:36.09:0,36,464	0/0:22,0:22:63.21:0,63,958	0/0:18,0:18:54.17:0,54,806	0/0:25,0:25:72.22:0,72,1073	1/1:1,45:44:99:2282,129,0	0/0:23,0:23:69.23:0,69,1037	0/0:27,0:27:81.27:0,81,1221	0/0:16,0:16:46.96:0,47,674	0/0:24,0:24:72.24:0,72,1077	0/0:27,0:27:78.24:0,78,1153	0/0:23,0:23:66.21:0,66,970	0/0:25,0:25:72.23:0,72,1064	0/0:21,0:21:60.20:0,60,899	0/0:10,0:10:30.08:0,30,437	0/0:17,0:17:51.15:0,51,758	0/0:24,0:24:72.20:0,72,990	0/0:28,0:28:81.24:0,81,1162	0/0:19,0:19:57.19:0,57,873	0/0:21,0:21:63.19:0,63,923	0/0:17,0:17:42.12:0,42,603	0/0:19,0:19:54.16:0,54,784	0/0:20,0:20:54.18:0,54,827	0/0:29,0:29:84.29:0,84,1286	0/0:39,0:39:99:0,117,1762	0/0:13,0:13:36.12:0,36,551
chr10	858436	.	TTTTTC	T	490.14	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=3.081;DP=561;FS=1.733;HRun=0;HaplotypeScore=112.2361;InbreedingCoeff=0.6207;MQ=58.42;MQ0=13;MQRankSum=-2.315;QD=9.08;ReadPosRankSum=-2.788;VQSLOD=1.7595;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:30,6:36:56.77:560,57,0	0/0:10,0:10:24.04:0,24,404	0/0:13,0:5:2.98:0,3,23	0/0:24,0:7:7.88:0,8,50	0/0:37,0:37:69.33:0,69,1332	0/0:18,0:18:39.10:0,39,727	0/0:24,0:23:42.06:0,42,938	1/1:18,0:15:2.77:37,3,0	0/0:11,0:11:18.06:0,18,273	0/0:24,0:24:48.07:0,48,925	0/0:36,0:35:72.22:0,72,1590	0/0:10,0:10:18.05:0,18,346	0/0:17,0:16:21.04:0,21,399	0/0:13,0:13:30.08:0,30,597	0/0:17,0:17:33.10:0,33,707	0/0:14,0:14:2.21:0,2,525	0/0:22,0:19:38.97:0,39,718	0/0:25,0:22:32.98:0,33,693	0/0:21,0:20:29.70:0,30,594	0/0:24,0:24:45.13:0,45,936	0/0:15,0:15:21.07:0,21,443	0/0:14,0:14:26.98:0,27,449	0/0:20,0:20:45.05:0,45,863	0/0:29,0:27:66.18:0,66,1554	0/0:25,0:24:54.12:0,54,1027	0/0:18,0:17:30.03:0,30,552	0/0:16,0:16:27.05:0,27,536	0/0:10,0:10:0.12:0,0,388
chr10	858460	.	T	TC	136.06	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=0.825;DP=540;FS=7.080;HRun=0;HaplotypeScore=65.5548;InbreedingCoeff=0.6875;MQ=54.99;MQ0=16;MQRankSum=-2.774;QD=13.61;ReadPosRankSum=-1.796;VQSLOD=3.9237;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:55.07:0,55,660	0/0:9,0:9:27:0,27,294	0/0:6,0:2:2.90:0,3,16	0/0:11,0:4:0.12:0,0,23	0/0:28,0:28:74.99:0,75,1047	0/0:22,0:21:54.10:0,54,657	0/0:28,0:26:63.11:0,63,797	1/1:5,5:7:20.90:228,21,0	0/0:9,0:9:24.06:0,24,290	0/0:21,0:21:60.04:0,60,680	0/0:36,0:35:96.72:0,97,1128	0/0:12,0:12:33.08:0,33,414	0/0:10,0:9:24:0,24,250	0/0:16,0:16:41.96:0,42,461	0/0:17,0:17:51.06:0,51,622	0/0:20,0:20:51.15:0,51,680	0/0:23,0:20:57.09:0,57,706	0/0:25,0:20:42.19:0,42,542	0/0:18,0:17:45.10:0,45,576	0/0:30,0:30:87.15:0,87,1084	0/0:12,0:11:26.99:0,27,314	0/0:16,0:16:45.03:0,45,528	0/0:23,0:23:65.89:0,66,785	0/0:35,0:33:93.25:0,93,1229	0/0:25,0:23:66.15:0,66,841	0/0:20,0:18:54.06:0,54,657	0/0:25,0:24:63.15:0,63,797	0/0:8,0:8:21:0,21,224
chr10	858637	.	G	GTC	1243.89	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-7.408;DP=687;FS=2.508;HRun=0;HaplotypeScore=79.8050;InbreedingCoeff=0.8212;MQ=59.97;MQ0=7;MQRankSum=-4.373;QD=31.89;ReadPosRankSum=-4.118;VQSLOD=4.3940;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,123,1619	0/0:1,0:1:3.01:0,3,40	0/0:14,0:7:12.04:0,12,158	0/0:19,0:15:18.39:0,18,389	0/0:24,0:24:60.18:0,60,778	0/0:21,0:21:57.19:0,57,759	0/0:48,0:48:99:0,132,1708	1/1:12,26:37:82.45:1339,82,0	0/0:18,0:18:48.16:0,48,639	0/0:24,0:24:63.17:0,63,793	0/0:9,0:9:27.09:0,27,359	0/0:19,0:19:54.18:0,54,718	0/0:31,0:30:84.28:0,84,1118	0/0:26,0:26:72.24:0,72,957	0/0:26,0:26:75.25:0,75,994	0/0:30,0:30:84.26:0,84,1103	0/0:35,0:35:99:0,102,1319	0/0:32,0:32:90.29:0,90,1192	0/0:20,0:20:48.11:0,48,605	0/0:17,0:17:48.16:0,48,639	0/0:32,0:32:87.26:0,87,1142	0/0:18,0:18:45.12:0,45,568	0/0:8,0:8:24.08:0,24,320	0/0:44,0:44:99:0,126,1678	0/0:19,0:19:51.16:0,51,665	0/0:29,0:29:87.28:0,87,1145	0/0:26,0:26:69.23:0,69,917	0/0:12,0:12:33.11:0,33,437
chr10	860528	.	G	GTTGT	1916.12	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-8.930;DP=754;FS=0.000;HRun=0;HaplotypeScore=116.6521;InbreedingCoeff=0.9993;MQ=74.35;MQ0=0;MQRankSum=-5.206;QD=53.23;ReadPosRankSum=-5.106;VQSLOD=3.2416;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:54.15:0,54,868	0/0:13,0:13:30.09:0,30,491	0/0:20,0:20:39.13:0,39,629	0/0:19,0:19:45.15:0,45,713	0/0:38,0:38:99:0,105,1721	0/0:26,0:26:69.21:0,69,1152	0/0:15,0:15:42.11:0,42,665	1/1:7,29:36:84.28:2011,84,0	0/0:19,0:19:51.17:0,51,881	0/0:37,0:37:90.30:0,90,1530	0/0:26,0:26:69.24:0,69,1188	0/0:25,0:25:75.23:0,75,1235	0/0:22,0:22:60.21:0,60,1036	0/0:32,0:32:87.28:0,87,1476	0/0:29,0:29:69.24:0,69,1188	0/0:28,0:28:72.25:0,72,1244	0/0:20,0:20:57.18:0,57,957	0/0:18,0:18:48.16:0,48,821	0/0:23,0:23:60.17:0,60,977	0/0:36,0:36:87.30:0,87,1484	0/0:19,0:19:51.17:0,51,881	0/0:29,0:29:81.28:0,81,1391	0/0:34,0:34:87.30:0,87,1499	0/0:26,0:26:69.14:0,69,1076	0/0:33,0:33:87.28:0,87,1477	0/0:39,0:39:99:0,108,1839	0/0:55,0:55:99:0,151,2592	0/0:15,0:15:42.11:0,42,670
chr10	863767	.	G	GTC	755.46	PASS	AB=0.979;AC=5;AF=0.089;AN=56;BaseQRankSum=6.813;DP=679;FS=1.689;HRun=0;HaplotypeScore=86.7483;InbreedingCoeff=0.6151;MQ=60.66;MQ0=33;MQRankSum=-0.020;QD=8.12;ReadPosRankSum=5.590;VQSLOD=3.0819;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:45,1:43:24.42:24,0,65	0/0:4,0:4:11.95:0,12,92	0/0:34,0:13:33:0,33,337	0/0:53,0:17:32.11:0,32,310	0/0:7,0:7:17.99:0,18,187	0/0:29,0:29:65.52:0,66,739	0/0:31,0:29:51.53:0,52,669	0/0:48,0:43:99:0,105,715	0/0:15,0:15:22.55:0,23,373	0/0:22,0:20:56.87:0,57,528	0/0:11,0:11:26.98:0,27,279	0/0:26,0:26:66.01:0,66,739	0/0:22,0:21:56.87:0,57,653	0/0:18,0:18:50.94:0,51,569	0/0:39,0:38:99:0,102,1139	0/0:22,0:21:54.02:0,54,621	1/1:6,34:35:39.13:836,39,0	0/0:19,0:15:41.81:0,42,463	0/0:13,0:12:31.50:0,32,325	0/0:11,0:11:17.95:0,18,143	0/0:57,0:57:99:0,108,1365	1/1:7,0:7:1.55:4,2,0	0/0:11,0:11:26.99:0,27,277	0/0:32,0:31:58.71:0,59,777	0/0:11,0:11:6.56:0,7,221	0/0:25,0:25:69.43:0,69,754	0/0:16,0:16:42:0,42,492	0/0:10,0:10:26.95:0,27,294
chr10	863771	.	G	GTC	1126.95	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=7.227;DP=651;FS=9.013;HRun=0;HaplotypeScore=84.9226;InbreedingCoeff=0.6443;MQ=60.17;MQ0=27;MQRankSum=-2.109;QD=8.11;ReadPosRankSum=1.787;VQSLOD=2.5245;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,36:44:4.15:131,4,0	0/0:4,0:4:11.95:0,12,92	0/0:29,0:14:36.04:0,36,386	0/0:43,0:16:40.38:0,40,348	0/0:8,0:8:20.94:0,21,205	0/0:26,0:26:71.69:0,72,791	0/0:26,0:25:18.02:0,18,538	0/1:46,0:41:99:189,0,264	0/0:15,0:15:22.18:0,22,365	0/0:22,0:20:52.63:0,53,471	0/0:12,0:12:26.98:0,27,279	0/0:24,0:24:63.02:0,63,715	0/0:23,0:22:53.10:0,53,618	0/0:20,0:20:56.95:0,57,616	0/0:39,0:38:99:0,105,1146	0/0:24,0:23:62.61:0,63,681	1/1:40,0:35:45.89:925,46,0	0/0:19,0:15:41.82:0,42,465	0/0:12,0:11:28.50:0,28,298	0/0:11,0:11:20.95:0,21,168	0/0:53,0:53:99:0,108,1365	1/1:6,0:6:1.55:4,2,0	0/0:11,0:11:26.98:0,27,275	0/0:31,0:30:59.18:0,59,776	0/0:10,0:10:3.56:0,4,196	0/0:25,0:25:47.39:0,47,686	0/0:15,0:15:41.93:0,42,485	0/0:10,0:10:26.93:0,27,275
chr10	863982	.	A	ATATT	824.64	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=-4.896;DP=230;FS=14.261;HRun=0;HaplotypeScore=33.3468;InbreedingCoeff=0.3497;MQ=62.68;MQ0=6;MQRankSum=-3.974;QD=20.62;ReadPosRankSum=-1.841;VQSLOD=1.2549;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:8:21.04:0,21,294	0/0:2,0:2:3.01:0,3,51	0/1:5,0:3:0:0,0,0	0/0:13,0:4:2.06:0,2,20	0/0:10,0:10:24.07:0,24,374	0/0:12,0:12:30.08:0,30,443	0/0:2,0:2:6.02:0,6,101	1/1:15,19:25:45.09:918,45,0	0/0:2,0:2:6.02:0,6,101	0/0:6,0:6:6.01:0,6,79	0/0:5,0:5:12.04:0,12,202	0/0:7,0:7:18.04:0,18,277	0/0:3,0:3:6.02:0,6,101	0/0:6,0:6:18.05:0,18,276	0/0:7,0:7:15.04:0,15,227	0/0:1,0:1:3.01:0,3,51	0/0:19,0:19:39.11:0,39,624	0/0:18,0:18:39.10:0,39,589	0/0:11,0:11:14.99:0,15,175	0/0:5,0:5:2.97:0,3,20	0/0:2,0:2:6.02:0,6,101	0/0:1,0:1:3:0,3,25	0/0:5,0:5:12.04:0,12,184	0/0:1,0:1:3.01:0,3,50	0/0:12,0:12:30.10:0,30,505	0/0:6,0:6:15.03:0,15,206	0/0:9,0:9:15.01:0,15,175	0/0:17,0:17:30.08:0,30,457
chr10	864024	.	TCAGACAACAC	T	305.99	PASS	AC=2;AF=0.037;AN=54;BaseQRankSum=3.387;DP=353;FS=9.305;HRun=0;HaplotypeScore=91.6280;InbreedingCoeff=0.8262;MQ=51.02;MQ0=22;MQRankSum=-3.318;QD=20.40;ReadPosRankSum=-0.604;VQSLOD=1.6573;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:51.18:0,51,2524	0/0:6,0:6:18.06:0,18,941	./.	0/0:16,0:2:6.02:0,6,269	0/0:16,0:16:48.16:0,48,2364	0/0:13,0:13:39.13:0,39,2054	0/0:9,0:9:27.08:0,27,1287	1/1:9,6:7:12.04:392,12,0	0/0:4,0:4:12.04:0,12,599	0/0:12,0:12:33.11:0,33,1739	0/0:13,0:13:39.13:0,39,2016	0/0:9,0:9:27.09:0,27,1421	0/0:9,0:9:24.08:0,24,1264	0/0:9,0:9:24.08:0,24,1264	0/0:12,0:12:36.12:0,36,1896	0/0:10,0:10:27.09:0,27,1422	0/0:20,0:20:60.21:0,60,2951	0/0:24,0:24:66.23:0,66,3426	0/0:12,0:8:24.08:0,24,1134	0/0:20,0:20:60.21:0,60,3152	0/0:10,0:10:30.10:0,30,1579	0/0:8,0:8:24.08:0,24,1241	0/0:7,0:7:21.07:0,21,1091	0/0:7,0:7:21.07:0,21,1105	0/0:20,0:20:57.20:0,57,2996	0/0:8,0:8:24.08:0,24,1264	0/0:22,0:22:66.23:0,66,3469	0/0:13,0:13:36.12:0,36,1893
chr10	868303	.	G	GTC	1152.02	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-7.719;DP=822;FS=10.152;HRun=0;HaplotypeScore=90.7975;InbreedingCoeff=0.9959;MQ=73.69;MQ0=0;MQRankSum=-1.693;QD=30.32;ReadPosRankSum=-3.772;VQSLOD=3.7890;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,135,1931	0/0:15,0:15:42.14:0,42,602	0/0:24,0:22:53.26:0,53,772	0/0:23,0:23:60.20:0,60,825	0/0:39,0:39:99:0,114,1594	0/0:28,0:28:81.27:0,81,1160	0/0:40,0:40:99:0,114,1592	1/1:6,32:33:69.24:1247,69,0	0/0:27,0:27:78.25:0,78,1099	0/0:30,0:30:84.28:0,84,1190	0/0:15,0:15:45.13:0,45,626	0/0:31,0:31:93.29:0,93,1309	0/0:34,0:34:99:0,102,1441	0/0:35,0:35:99:0,99,1380	0/0:54,0:54:99:0,144,2002	0/0:52,0:52:99:0,151,2148	0/0:22,0:22:63.21:0,63,902	0/0:23,0:23:69.21:0,69,965	0/0:26,0:26:72.24:0,72,1030	0/0:14,0:14:39.10:0,39,522	0/0:36,0:36:99:0,108,1547	0/0:29,0:29:87.29:0,87,1244	0/0:20,0:20:57.19:0,57,816	0/0:25,0:25:72.24:0,72,1030	0/0:22,0:22:60.20:0,60,859	0/0:41,0:41:99:0,117,1675	0/0:25,0:25:72.24:0,72,1031	0/0:7,0:7:21.07:0,21,300
chr10	872550	.	G	GTA	886.27	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=1.247;DP=498;FS=13.479;HRun=0;HaplotypeScore=75.6116;InbreedingCoeff=0.2752;MQ=48.39;MQ0=7;MQRankSum=-2.161;QD=8.69;ReadPosRankSum=-3.079;VQSLOD=1.2601;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:90.23:0,90,1088	0/0:3,0:3:9.03:0,9,114	0/0:19,0:6:8.97:0,9,94	0/0:14,0:5:2.96:0,3,37	0/0:28,0:28:66.13:0,66,802	0/0:24,0:24:63.16:0,63,757	0/0:9,0:8:12.04:0,12,153	1/1:26,10:35:60.09:789,60,0	0/0:23,0:23:42.01:0,42,494	0/0:14,0:14:36.09:0,36,433	0/0:16,0:16:24.02:0,24,270	0/0:12,0:12:30.06:0,30,340	0/0:13,0:13:21.05:0,21,253	0/0:20,0:19:38.99:0,39,403	0/0:11,0:11:21.01:0,21,235	0/0:11,0:11:24.06:0,24,291	0/0:19,0:19:51.01:0,51,606	0/0:21,0:21:51.13:0,51,618	0/0:19,0:19:45.09:0,45,508	0/0:16,0:16:35.92:0,36,368	0/0:14,0:14:20.83:0,21,251	0/0:6,0:6:15.05:0,15,190	0/0:7,0:7:12.02:0,12,138	0/0:14,0:14:30.08:0,30,365	0/0:21,0:21:39.12:0,39,495	0/1:27,0:24:74.38:74,0,429	0/1:35,0:32:99:128,0,331	0/1:4,0:4:17.78:18,0,51
chr10	873003	.	A	ATGT	12250.50	PASS	AB=0.823;AC=27;AF=0.482;AN=56;BaseQRankSum=9.617;DP=961;FS=363.420;HRun=0;HaplotypeScore=189.1333;InbreedingCoeff=-0.9320;MQ=67.94;MQ0=0;MQRankSum=-20.817;QD=13.13;ReadPosRankSum=-3.009;VQSLOD=-0.5754;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:53,17:70:99:987,0,2255	0/1:16,5:21:99:284,0,692	0/0:25,1:27:18.24:0,18,945	0/1:24,4:29:99:209,0,879	0/1:29,5:34:99:214,0,1262	0/1:27,11:38:99:669,0,1112	0/1:25,8:33:99:404,0,985	0/1:38,8:46:99:628,0,1321	0/1:18,8:26:99:477,0,728	0/1:26,4:30:99:326,0,1012	0/1:20,4:24:99:219,0,848	0/1:37,11:48:99:632,0,1432	0/1:20,14:34:99:865,0,839	0/1:22,6:30:99:405,0,845	0/1:30,11:42:99:642,0,1262	0/1:28,11:39:99:701,0,1090	0/1:29,12:41:99:647,0,1216	0/1:22,6:28:99:403,0,844	0/1:26,4:29:99:291,0,817	0/1:24,3:27:99:125,0,1057	0/1:37,9:46:99:558,0,1607	0/1:36,7:44:99:492,0,1437	0/1:17,3:20:99:170,0,612	0/1:39,7:46:99:424,0,1562	0/1:26,0:26:58.25:58,0,1098	0/1:28,12:40:99:726,0,1183	0/1:21,8:30:99:508,0,976	0/1:7,3:7:99:186,0,184
chr10	873379	.	CTTT	C	10751.41	PASS	AB=0.749;AC=26;AF=0.464;AN=56;BaseQRankSum=23.909;DP=1073;FS=109.844;HRun=7;HaplotypeScore=272.2641;InbreedingCoeff=-0.7232;MQ=59.40;MQ0=1;MQRankSum=-21.598;QD=10.66;ReadPosRankSum=-0.636;VQSLOD=-0.3523;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:49,15:64:99:411,0,2298	0/1:11,5:16:99:165,0,664	0/0:14,0:14:29.84:0,30,554	0/0:19,0:16:36.59:0,37,770	0/1:35,13:47:99:402,0,1915	0/1:38,16:52:99:453,0,2054	0/1:31,21:52:99:728,0,1699	1/1:9,36:42:90.20:1314,90,0	0/1:23,20:41:99:643,0,1061	0/1:31,20:51:99:784,0,1475	0/1:17,7:24:99:233,0,927	0/1:25,20:44:99:657,0,1209	0/1:33,10:42:99:293,0,1871	0/1:33,13:46:99:267,0,1859	0/1:23,13:36:99:432,0,1218	0/1:28,17:45:99:509,0,1562	0/1:28,16:43:99:376,0,1524	0/1:16,15:31:99:492,0,899	0/1:25,16:40:99:582,0,1220	0/1:22,8:30:99:278,0,1354	0/1:26,10:36:99:196,0,1538	0/1:31,7:38:99:158,0,1834	0/1:24,8:32:99:201,0,1172	0/1:36,16:52:99:272,0,1970	0/0:30,1:31:44.32:0,44,1895	0/1:37,13:50:99:469,0,1729	0/1:25,14:38:99:353,0,1511	0/1:1,3:4:57.97:83,0,58
chr10	876276	.	CA	C	574.72	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.137;DP=652;FS=6.351;HRun=3;HaplotypeScore=56.8142;InbreedingCoeff=0.9146;MQ=59.18;MQ0=6;MQRankSum=3.787;QD=27.37;ReadPosRankSum=2.249;VQSLOD=2.6148;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:81.27:0,81,1166	0/0:12,0:12:33.11:0,33,475	0/0:15,0:4:12.03:0,12,145	0/0:13,0:6:8.70:0,9,96	0/0:40,0:40:99:0,120,1715	0/0:30,0:30:90.30:0,90,1295	0/0:19,0:19:42.14:0,42,604	0/0:44,0:41:99:0,117,1682	0/0:14,0:14:42.13:0,42,586	0/0:25,0:24:72.23:0,72,1019	0/0:28,0:27:75.25:0,75,1076	0/0:15,0:15:42.14:0,42,603	0/0:28,0:28:81.27:0,81,1163	0/0:14,0:14:42.14:0,42,605	0/0:21,0:21:57.19:0,57,819	0/0:24,0:24:69.22:0,69,973	1/1:0,21:21:54.17:670,54,0	0/0:18,0:18:54.18:0,54,776	0/0:28,0:26:78.26:0,78,1123	0/0:30,0:30:87.29:0,87,1250	0/0:20,0:20:60.20:0,60,864	0/0:31,0:31:84.28:0,84,1199	0/0:25,0:25:75.22:0,75,1045	0/0:14,0:14:42.14:0,42,604	0/0:26,0:26:78.22:0,78,1093	0/0:26,0:26:75.25:0,75,1079	0/0:30,0:29:87.29:0,87,1250	0/0:12,0:12:36.12:0,36,518
chr10	877952	.	TTAGTG	T	212.56	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.956;DP=858;FS=1.841;HRun=0;HaplotypeScore=101.9216;InbreedingCoeff=0.9233;MQ=45.28;MQ0=55;MQRankSum=-0.040;QD=30.37;ReadPosRankSum=-3.036;VQSLOD=2.7466;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:69.24:0,69,2101	0/0:19,0:19:45.15:0,45,1411	0/0:37,0:3:9.03:0,9,247	0/0:39,0:8:24.08:0,24,654	0/0:23,0:22:48.16:0,48,1490	0/0:26,0:26:54.19:0,54,1688	0/0:27,0:24:36.12:0,36,1083	1/1:2,5:5:15.05:301,15,0	0/0:41,0:34:60.21:0,60,1838	0/0:23,0:23:66.23:0,66,2005	0/0:14,0:14:36.12:0,36,1140	0/0:29,0:28:57.20:0,57,1790	0/0:41,0:40:59.94:0,60,1838	0/0:29,0:27:48.16:0,48,1481	0/0:48,0:46:81.28:0,81,2446	0/0:35,0:33:48.16:0,48,1502	0/0:25,0:24:36.12:0,36,1109	0/0:19,0:17:33.11:0,33,1046	0/0:22,0:21:63.22:0,63,1946	0/0:39,0:38:87.30:0,87,2703	0/0:58,0:53:99:0,123,3833	0/0:26,0:25:57.20:0,57,1806	0/0:24,0:23:42.14:0,42,1327	0/0:23,0:20:36.12:0,36,1046	0/0:27,0:27:51.18:0,51,1538	0/0:45,0:42:99:0,120,3510	0/0:57,0:46:81.23:0,81,2377	0/0:15,0:7:21.07:0,21,666
chr10	878633	.	G	GACTCTAGT	1420.36	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-4.218;DP=738;FS=0.000;HRun=0;HaplotypeScore=178.7709;InbreedingCoeff=0.9835;MQ=66.02;MQ0=2;MQRankSum=-4.633;QD=36.42;ReadPosRankSum=-0.534;VQSLOD=3.0106;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,15:20:30.10:1334,30,0	0/0:17,0:17:42.14:0,42,1205	0/0:30,0:28:81.24:0,81,2092	0/0:27,0:26:62.52:0,63,1526	0/0:28,0:28:75.23:0,75,1927	0/0:26,0:26:72.22:0,72,1929	0/0:16,0:16:48.15:0,48,1281	1/1:8,3:5:12.02:203,12,0	0/0:23,0:22:66.23:0,66,1820	0/0:29,0:29:81.26:0,81,2139	0/0:26,0:26:75.19:0,75,2014	0/0:25,0:25:75.24:0,75,2078	0/0:27,0:27:81.26:0,81,2172	0/0:27,0:27:81.28:0,81,2215	0/0:44,0:44:99:0,132,3467	0/0:35,0:35:99:0,102,2676	0/0:24,0:24:66.18:0,66,1741	0/0:20,0:20:57.20:0,57,1629	0/0:24,0:24:69.22:0,69,1849	0/0:32,0:32:93.31:0,93,2585	0/0:20,0:20:57.20:0,57,1515	0/0:34,0:34:93.32:0,93,2605	0/0:32,0:32:90.31:0,90,2580	0/0:28,0:28:84.27:0,84,2290	0/0:33,0:33:96.32:0,96,2539	0/0:28,0:28:84.29:0,84,2316	0/0:32,0:32:90.31:0,90,2527	0/0:12,0:12:36.09:0,36,908
chr10	883626	.	ACTAT	A	1523.11	PASS	AB=0.885;AC=33;AF=0.688;AN=48;BaseQRankSum=5.174;DP=609;FS=2.862;HRun=0;HaplotypeScore=114.4920;InbreedingCoeff=0.4851;MQ=51.32;MQ0=9;MQRankSum=0.191;QD=4.02;ReadPosRankSum=1.909;VQSLOD=1.8843;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:17:1.82:0,2,5	1/1:11,0:13:2.88:28,3,0	./.	./.	1/1:19,0:24:2.97:20,3,0	0/0:19,0:24:9.01:0,9,128	0/1:16,0:13:0:0,0,0	./.	1/1:16,0:24:12.01:111,12,0	0/0:32,0:32:33.10:0,33,651	0/0:27,0:27:26.96:0,27,460	1/1:15,8:23:12.04:179,12,0	1/1:20,8:27:9.03:134,9,0	1/1:16,0:22:6.01:55,6,0	1/1:17,9:26:3.01:43,3,0	0/1:19,5:24:99:119,0,122	0/0:26,0:24:27.09:0,27,604	0/0:12,0:12:15.03:0,15,282	1/1:17,0:16:3.01:40,3,0	1/1:8,0:15:11.94:94,12,0	1/1:24,0:24:6.01:66,6,0	./.	1/1:16,6:22:5.89:89,6,0	1/1:15,4:19:21.05:274,21,0	1/1:16,6:22:3.01:45,3,0	0/1:15,4:19:47.38:157,0,47	1/1:17,7:23:12.04:179,12,0	1/1:16,0:16:5.99:48,6,0
chr10	883813	.	A	AAAC	364.44	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-5.137;DP=665;FS=0.000;HRun=0;HaplotypeScore=89.6205;InbreedingCoeff=0.9967;MQ=54.89;MQ0=44;MQRankSum=-1.372;QD=17.35;ReadPosRankSum=-3.289;VQSLOD=2.2018;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:45:99:0,105,1463	0/0:10,0:10:27.09:0,27,385	0/0:23,0:15:33.06:0,33,424	0/0:31,0:22:55.63:0,56,680	0/0:33,0:33:78:0,78,1095	0/0:23,0:22:60.14:0,60,806	0/0:19,0:16:42.06:0,42,560	1/1:12,8:10:27.07:458,27,0	0/0:24,0:22:60.20:0,60,867	0/0:24,0:24:57.18:0,57,804	0/0:27,0:26:69.22:0,69,980	0/0:16,0:13:33.10:0,33,461	0/0:24,0:24:63.15:0,63,863	0/0:27,0:23:63.18:0,63,888	0/0:26,0:24:51.03:0,51,649	0/0:19,0:19:39.07:0,39,505	0/0:36,0:35:87.20:0,87,1170	0/0:12,0:11:33.11:0,33,474	0/0:28,0:25:66.20:0,66,931	0/0:37,0:35:93.31:0,93,1328	0/0:17,0:17:41.97:0,42,607	0/0:22,0:22:54.17:0,54,759	0/0:21,0:21:54.18:0,54,773	0/0:21,0:21:48.10:0,48,652	0/0:23,0:22:57.19:0,57,824	0/0:22,0:21:60.19:0,60,850	0/0:19,0:16:39.07:0,39,522	0/0:14,0:11:33.11:0,33,477
chr10	883875	.	AAACATACT	A	1241.12	PASS	AB=0.807;AC=3;AF=0.054;AN=56;BaseQRankSum=7.162;DP=661;FS=19.800;HRun=0;HaplotypeScore=110.1075;InbreedingCoeff=-0.0675;MQ=43.60;MQ0=148;MQRankSum=-5.441;QD=15.71;ReadPosRankSum=2.930;VQSLOD=0.5125;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:27,6:29:99:383,0,2229	0/0:12,0:11:30.10:0,30,1385	0/0:25,0:3:4.83:0,5,133	0/0:23,0:3:4.57:0,5,90	0/0:24,0:21:45.10:0,45,1706	0/0:29,0:18:42.14:0,42,1942	0/0:23,0:14:39.13:0,39,1588	0/0:41,0:18:54.19:0,54,2225	0/1:18,11:26:99:765,0,1100	0/0:25,0:20:60.21:0,60,2440	0/0:23,0:22:48.05:0,48,1485	0/0:17,0:12:21.07:0,21,971	0/0:22,0:20:39.13:0,39,1772	0/0:26,0:23:51.11:0,51,1958	0/0:27,0:23:45.15:0,45,1957	0/0:25,0:22:51.34:0,51,2166	0/1:14,3:16:99:193,0,908	0/0:10,0:7:18.06:0,18,733	0/0:27,0:18:54.19:0,54,2268	0/0:39,0:30:78.27:0,78,3297	0/0:21,0:13:27.09:0,27,1170	0/0:22,0:18:39.13:0,39,1668	0/0:27,0:26:39.13:0,39,1607	0/0:14,0:13:30.10:0,30,1212	0/0:30,0:25:54.10:0,54,2164	0/0:22,0:17:51.18:0,51,2127	0/0:14,0:11:24.04:0,24,970	0/0:14,0:13:27.09:0,27,1179
chr10	883960	.	T	TAGA	1829.56	PASS	AB=0.645;AC=3;AF=0.054;AN=56;BaseQRankSum=-6.754;DP=621;FS=20.631;HRun=0;HaplotypeScore=71.2118;InbreedingCoeff=-0.0702;MQ=52.38;MQ0=104;MQRankSum=-1.041;QD=22.31;ReadPosRankSum=2.030;VQSLOD=1.6551;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:8,13:18:99:500,0,258	0/0:10,0:9:24.07:0,24,372	0/0:17,0:5:4.40:0,4,51	0/0:17,0:5:3.48:0,3,48	0/0:34,0:31:65.87:0,66,1096	0/0:31,0:22:60.21:0,60,999	0/0:19,0:12:30.06:0,30,466	0/0:34,0:13:36.12:0,36,592	0/1:14,19:30:99:884,0,331	0/0:23,0:23:69.24:0,69,1142	0/0:19,0:17:39.13:0,39,636	0/0:17,0:15:42.13:0,42,672	0/0:26,0:22:51.04:0,51,839	0/0:23,0:22:54.18:0,54,882	0/0:24,0:22:57.19:0,57,949	0/0:28,0:24:57.18:0,57,923	0/1:15,13:25:99:545,0,575	0/0:5,0:4:12.04:0,12,200	0/0:18,0:13:39.13:0,39,650	0/0:24,0:22:54.18:0,54,899	0/0:14,0:8:18.06:0,18,300	0/0:19,0:19:48.16:0,48,800	0/0:26,0:25:54.18:0,54,900	0/0:17,0:16:48.16:0,48,795	0/0:33,0:30:72.25:0,72,1180	0/0:27,0:23:69.21:0,69,1087	0/0:26,0:16:39.13:0,39,649	0/0:8,0:7:18.06:0,18,300
chr10	884446	.	T	TC	557.80	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-3.151;DP=559;FS=4.784;HRun=7;HaplotypeScore=46.8535;InbreedingCoeff=0.6683;MQ=49.97;MQ0=61;MQRankSum=1.161;QD=17.43;ReadPosRankSum=2.224;VQSLOD=3.2518;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:66.08:0,66,629	0/0:7,0:7:9.01:0,9,87	0/0:23,0:2:3:0,3,29	0/0:24,0:1:2.90:0,3,16	0/0:22,0:16:30.04:0,30,283	0/0:13,0:11:21.03:0,21,203	0/0:18,0:17:30.04:0,30,289	0/0:36,0:29:69.03:0,69,648	0/0:17,0:16:42.06:0,42,400	0/0:10,0:9:24.03:0,24,228	0/0:15,0:14:18:0,18,168	0/0:21,0:21:51.08:0,51,492	0/0:18,0:18:45.07:0,45,434	0/0:21,0:21:57.02:0,57,533	0/0:34,0:34:75.09:0,75,717	0/0:17,0:17:39.04:0,39,371	1/1:6,26:31:54.17:652,54,0	0/0:9,0:8:24.04:0,24,232	0/0:15,0:10:24.04:0,24,231	0/0:29,0:29:36.04:0,36,347	0/0:28,0:25:50.81:0,51,492	0/0:13,0:13:24.03:0,24,231	0/0:19,0:18:30.05:0,30,289	0/0:29,0:29:72.11:0,72,695	0/0:19,0:18:33.05:0,33,318	0/0:16,0:13:33.05:0,33,318	0/0:17,0:17:36.05:0,36,347	0/0:6,0:5:9.01:0,9,87
chr10	889532	.	C	CCACAGCAAA	1736.31	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-0.895;DP=774;FS=6.594;HRun=0;HaplotypeScore=190.8225;InbreedingCoeff=0.9870;MQ=63.80;MQ0=0;MQRankSum=-6.810;QD=37.75;ReadPosRankSum=-0.481;VQSLOD=2.3456;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:18,25:32:45.07:1831,45,0	0/0:9,0:9:24.08:0,24,652	0/0:39,0:20:45.08:0,45,765	0/0:21,0:12:16.67:0,17,410	0/0:28,0:28:69.20:0,69,1761	0/0:22,0:22:63.20:0,63,1702	0/0:26,0:26:69.05:0,69,1504	0/0:25,0:25:54.18:0,54,1419	0/0:26,0:26:78.25:0,78,2065	0/0:24,0:24:51.18:0,51,1374	0/0:22,0:22:54.16:0,54,1333	0/0:22,0:22:54.16:0,54,1343	0/0:39,0:39:93.29:0,93,2469	0/0:21,0:21:60.17:0,60,1597	0/0:24,0:24:57.15:0,57,1399	0/0:27,0:27:72.22:0,72,1917	0/0:28,0:28:75.23:0,75,2012	0/0:33,0:33:93.29:0,93,2403	0/0:26,0:26:56.84:0,57,1248	0/0:34,0:34:81:0,81,1774	0/0:46,0:46:99:0,104,3047	0/0:30,0:30:69.19:0,69,1697	0/0:23,0:23:57.17:0,57,1400	0/0:33,0:33:84.27:0,84,2307	0/0:23,0:23:57.18:0,57,1546	0/0:29,0:29:81.26:0,81,2109	0/0:32,0:32:75.26:0,75,2046	0/0:16,0:16:36.12:0,36,1037
chr10	893520	.	GGTGT	G	77.32	PASS	AB=0.950;AC=10;AF=0.200;AN=50;BaseQRankSum=1.569;DP=491;FS=1.582;HRun=0;HaplotypeScore=91.6959;InbreedingCoeff=0.1827;MQ=43.90;MQ0=42;MQRankSum=0.815;QD=0.55;ReadPosRankSum=-1.089;VQSLOD=1.3830;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:25,10:34:3.01:46,3,0	0/0:7,0:6:2.97:0,3,20	./.	./.	0/0:18,0:16:11.09:0,11,178	0/0:17,0:14:6.02:0,6,132	0/1:22,0:18:25.36:25,0,249	./.	1/1:14,0:12:2.88:15,3,0	0/0:19,0:13:15.05:0,15,295	0/0:15,0:14:12.04:0,12,242	0/1:18,0:17:29.53:30,0,225	0/0:11,0:10:17.98:0,18,291	0/1:15,2:14:31.23:31,0,249	0/0:20,0:18:11.96:0,12,219	0/0:13,0:12:15.02:0,15,254	1/1:9,0:14:3:25,3,0	0/0:21,0:22:26.78:0,27,506	0/0:12,0:8:3.01:0,3,70	0/0:15,0:14:9.03:0,9,180	0/0:30,0:28:6.49:0,6,121	0/0:13,0:13:6.02:0,6,138	0/1:17,2:19:34.26:34,0,145	0/0:22,0:22:11.76:0,12,154	0/0:16,0:20:11.78:0,12,222	0/0:18,0:16:18.01:0,18,234	0/0:14,0:15:8.70:0,9,116	0/0:9,0:6:9.03:0,9,194
chr10	897724	.	AT	A	761.70	PASS	AB=0.868;AC=5;AF=0.093;AN=54;BaseQRankSum=6.244;DP=559;FS=0.000;HRun=12;HaplotypeScore=50.2513;InbreedingCoeff=0.3259;MQ=53.86;MQ0=43;MQRankSum=-1.934;QD=7.77;ReadPosRankSum=0.600;VQSLOD=1.7081;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,35:38:92.62:719,93,0	0/0:9,1:9:3.41:0,3,200	0/0:12,1:9:17.18:0,17,133	0/0:9,0:6:3.83:0,4,78	0/0:19,1:14:33.07:0,33,335	0/0:17,2:20:10.14:0,10,423	0/0:11,0:10:27.01:0,27,263	./.	0/1:18,12:26:99:145,0,302	0/0:17,1:17:21.83:0,22,393	0/0:16,0:14:35.95:0,36,333	0/0:18,1:18:24.68:0,25,411	0/0:13,2:15:15.67:0,16,326	0/0:20,1:20:24.85:0,25,426	0/0:22,0:19:51.09:0,51,511	0/0:23,1:21:24.86:0,25,434	0/0:20,1:20:27.88:0,28,464	0/0:28,2:29:29.15:0,29,655	0/0:17,0:14:41.90:0,42,395	0/0:29,1:28:51.54:0,52,659	0/0:8,0:8:21.02:0,21,202	0/1:9,0:8:5.19:5,0,134	0/0:21,3:22:33.44:0,33,514	0/0:20,0:16:42.07:0,42,419	0/0:21,0:19:39.08:0,39,396	0/1:13,2:15:1.57:2,0,325	0/0:35,2:32:25.56:0,26,591	0/0:20,0:18:48.10:0,48,487
chr10	922701	.	GGCGCGCGCGC	G	120.94	PASS	AB=1.000;AC=9;AF=0.450;AN=20;BaseQRankSum=1.240;DP=309;FS=0.000;HRun=0;HaplotypeScore=18.0654;InbreedingCoeff=0.4893;MQ=30.91;MQ0=131;MQRankSum=0.196;QD=1.89;ReadPosRankSum=-1.763;VQSLOD=0.3490;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:2,0:1:3.01:0,3,34	0/0:3,0:3:2.67:0,3,26	./.	./.	./.	1/1:9,6:2:5.99:70,6,0	./.	0/0:15,0:6:12.04:0,12,302	./.	1/1:28,0:18:0.47:1,0,0	0/0:14,0:9:0.94:0,1,1	./.	0/1:14,0:11:0:0,0,0	./.	./.	./.	0/0:13,0:6:15.05:0,15,627	./.	./.	./.	./.	./.	./.	1/1:1,3:4:6.02:132,6,0	1/1:3,0:3:0.47:1,0,0	./.
chr10	923590	.	TTG	T	1099.17	PASS	AB=0.903;AC=17;AF=0.304;AN=56;BaseQRankSum=7.024;DP=575;FS=0.559;HRun=0;HaplotypeScore=85.8540;InbreedingCoeff=-0.1586;MQ=45.54;MQ0=14;MQRankSum=1.522;QD=3.59;ReadPosRankSum=0.154;VQSLOD=1.8959;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:16,10:27:35.71:351,36,0	0/0:13,0:12:18.02:0,18,234	0/0:29,0:17:3.01:0,3,42	0/0:33,0:13:3.01:0,3,46	0/1:12,1:13:25.15:25,0,74	0/0:25,0:25:35.99:0,36,551	0/1:18,2:20:35.25:35,0,371	0/0:19,0:16:3:0,3,26	0/0:21,0:21:35.88:0,36,528	0/1:24,1:23:7.32:7,0,290	0/1:14,3:17:16.14:16,0,202	0/1:27,3:29:14.20:14,0,645	0/0:22,0:22:32.85:0,33,470	0/1:24,3:25:52.64:53,0,532	0/1:24,2:26:30.55:31,0,499	0/0:16,0:16:30.10:0,30,444	1/1:4,17:23:50.75:515,51,0	0/1:23,3:25:9.22:9,0,529	0/0:12,0:12:14.91:0,15,186	0/1:14,0:14:11.96:12,0,229	0/1:9,4:12:99:127,0,179	0/0:10,1:11:3.01:0,3,46	0/1:9,1:10:28.44:28,0,40	0/1:20,3:23:19.96:20,0,349	0/0:16,0:15:15.02:0,15,205	0/0:26,1:25:4.91:0,5,481	0/0:23,0:23:19.03:0,19,437	0/1:8,1:9:19.13:19,0,165
chr10	930727	.	AGAG	A	1695.11	PASS	AB=0.989;AC=9;AF=0.161;AN=56;BaseQRankSum=7.479;DP=761;FS=10.716;HRun=0;HaplotypeScore=110.5574;InbreedingCoeff=0.4974;MQ=44.26;MQ0=48;MQRankSum=-1.267;QD=8.43;ReadPosRankSum=-0.463;VQSLOD=2.1363;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:41,0:34:72.10:929,72,0	0/0:10,0:10:21.03:0,21,361	0/0:19,0:4:3.01:0,3,34	0/0:28,0:6:4.26:0,4,58	0/0:27,0:26:53.05:0,53,795	0/0:22,0:20:26.89:0,27,354	0/0:12,0:10:15.02:0,15,261	1/1:32,0:20:18.04:230,18,0	0/1:35,0:31:99:138,0,484	0/0:34,1:33:36.10:0,36,1335	0/0:23,0:19:20.99:0,21,377	0/0:27,0:27:56.49:0,56,922	0/0:28,0:27:41.80:0,42,683	0/0:24,0:23:36.12:0,36,667	0/0:39,0:39:54.14:0,54,929	0/1:27,1:28:20.69:21,0,255	1/1:22,24:43:5.72:511,6,0	0/0:20,0:15:24.04:0,24,384	0/1:19,0:14:16.57:17,0,370	0/0:30,0:29:63.17:0,63,1136	0/0:40,0:36:99:0,102,1772	0/0:27,0:25:27.09:0,27,423	0/0:33,0:33:32.92:0,33,620	0/0:25,0:23:36.08:0,36,642	0/0:28,0:27:29.90:0,30,458	0/0:30,0:29:63.20:0,63,1185	0/0:27,0:26:42.47:0,42,734	0/0:6,0:4:9.03:0,9,180
chr10	930729	.	AGG	A	537.57	PASS	AB=0.818;AC=4;AF=0.071;AN=56;BaseQRankSum=10.782;DP=764;FS=3.896;HRun=2;HaplotypeScore=108.1578;InbreedingCoeff=0.3337;MQ=44.59;MQ0=40;MQRankSum=-0.354;QD=4.41;ReadPosRankSum=0.841;VQSLOD=-0.3360;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:16,25:34:3.91:444,4,0	0/0:10,0:10:21.07:0,21,415	0/0:19,0:4:6.02:0,6,99	0/0:26,0:6:14.78:0,15,179	0/0:27,0:26:60.07:0,60,1061	0/0:22,0:21:26.88:0,27,525	0/0:14,0:12:27.05:0,27,419	0/0:28,0:20:34.79:0,35,479	0/1:28,8:31:42.59:43,0,562	0/0:35,0:34:97.36:0,97,1810	0/0:24,0:21:29.86:0,30,515	0/0:29,0:29:56.86:0,57,1054	0/0:29,0:28:44.02:0,44,818	0/0:24,0:23:38.87:0,39,765	0/0:39,0:39:54.19:0,54,1085	0/0:27,0:27:22.39:0,22,432	0/1:35,10:42:11.07:155,0,11	0/0:21,0:15:27.09:0,27,497	0/0:19,0:14:38.23:0,38,645	0/0:30,0:29:63.22:0,63,1253	0/0:41,0:37:99:0,105,2074	0/0:27,0:25:33.11:0,33,622	0/0:33,0:33:38.75:0,39,745	0/0:25,0:23:42.11:0,42,783	0/0:29,0:28:35.89:0,36,656	0/0:30,0:29:87.29:0,87,1582	0/0:26,0:26:41.23:0,41,798	0/0:7,0:5:12.01:0,12,205
chr10	933841	.	TA	T	364.97	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.881;DP=274;FS=0.000;HRun=7;HaplotypeScore=25.7434;InbreedingCoeff=0.4718;MQ=62.14;MQ0=0;MQRankSum=1.958;QD=21.47;ReadPosRankSum=1.178;VQSLOD=2.1283;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:45.14:0,45,566	0/0:6,0:6:18.06:0,18,226	0/0:1,0:1:3.01:0,3,30	0/0:5,0:4:8.05:0,8,72	0/0:21,0:21:57.18:0,57,715	0/0:11,0:11:21.07:0,21,264	0/0:10,0:10:27.09:0,27,338	0/0:22,0:22:63.20:0,63,791	0/0:4,0:4:9.03:0,9,113	0/0:10,0:10:24.08:0,24,302	0/0:11,0:11:20.92:0,21,251	0/0:5,0:5:9.03:0,9,113	0/0:7,0:7:11.89:0,12,151	0/0:5,0:5:12.04:0,12,151	0/0:5,0:5:12.04:0,12,151	0/0:4,0:4:9.03:0,9,113	1/1:1,16:16:45.10:459,45,0	0/0:12,0:12:36.08:0,36,424	0/0:28,0:28:69.22:0,69,864	0/0:7,0:7:18.06:0,18,226	0/0:1,0:1:3.01:0,3,38	0/0:2,0:2:3.01:0,3,38	0/0:5,0:5:15.05:0,15,189	0/0:4,0:4:6.02:0,6,75	0/0:17,0:17:45.14:0,45,565	0/0:12,0:12:33.11:0,33,414	0/0:12,0:12:33.10:0,33,409	0/0:14,0:13:42.13:0,42,528
chr10	935307	.	A	ACCCTGTC	3729.75	PASS	AC=14;AF=0.280;AN=50;BaseQRankSum=-5.785;DP=524;FS=0.000;HRun=0;HaplotypeScore=70.7414;InbreedingCoeff=0.7895;MQ=21.83;MQ0=183;MQRankSum=-0.233;QD=27.03;ReadPosRankSum=0.623;VQSLOD=3.0232;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:21,6:7:8.99:230,9,0	0/0:7,0:7:21.02:0,21,475	./.	./.	0/0:14,0:11:12.41:0,12,171	0/0:20,0:7:8.99:0,9,171	0/0:16,0:7:6.02:0,6,152	1/1:14,0:2:3.01:114,3,0	1/1:10,10:9:12.04:470,12,0	0/0:33,0:25:60.56:0,61,1300	0/0:18,0:16:21.07:0,21,352	0/0:35,0:19:21.07:0,21,515	0/0:16,0:12:21.07:0,21,494	0/0:28,0:15:21.07:0,21,460	0/0:16,0:7:8.99:0,9,136	0/0:16,0:11:23.95:0,24,440	1/1:18,1:1:3.01:118,3,0	0/0:6,0:2:3.01:0,3,76	0/0:21,0:8:20.93:0,21,313	0/0:16,0:14:24.08:0,24,508	./.	0/0:17,0:14:15.05:0,15,340	0/0:21,0:19:15.44:0,15,214	0/0:14,0:3:2.96:0,3,19	0/0:17,0:14:29.92:0,30,619	1/1:9,13:18:35.89:1142,36,0	1/1:8,12:17:33.10:1186,33,0	1/1:4,4:5:12.04:471,12,0
chr10	937848	.	AT	A	717.98	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.018;DP=691;FS=4.515;HRun=9;HaplotypeScore=65.0085;InbreedingCoeff=0.9915;MQ=78.63;MQ0=0;MQRankSum=-1.614;QD=19.94;ReadPosRankSum=-0.211;VQSLOD=3.9966;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,30:36:89.96:813,90,0	0/0:9,0:9:21.06:0,21,242	0/0:19,0:19:32.99:0,33,314	0/0:12,0:12:21.04:0,21,212	0/0:33,0:33:90.24:0,90,1020	0/0:29,0:29:81.24:0,81,935	0/0:18,0:18:54.13:0,54,602	0/0:33,0:33:72.21:0,72,831	0/0:25,0:25:72.20:0,72,823	0/0:39,0:39:99:0,111,1260	0/0:21,0:21:57.10:0,57,641	0/0:22,0:22:57.17:0,57,658	0/0:17,0:17:48.13:0,48,544	0/0:24,0:24:63.15:0,63,713	0/0:30,0:30:87.24:0,87,987	0/0:21,0:21:60.17:0,60,682	0/0:30,0:30:81.24:0,81,935	0/0:23,0:23:46.18:0,46,706	0/0:14,0:14:42.11:0,42,475	0/0:38,0:38:99:0,108,1230	0/0:26,0:26:75.14:0,75,828	0/0:26,0:26:75.22:0,75,866	0/0:25,0:25:66.20:0,66,762	0/0:15,0:15:42.12:0,42,484	0/0:24,0:24:69.19:0,69,787	0/0:25,0:25:66.20:0,66,762	0/0:45,0:45:99:0,129,1445	0/0:12,0:12:36.07:0,36,394
chr10	938191	.	G	GCACA	2061.24	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-5.492;DP=744;FS=6.612;HRun=0;HaplotypeScore=119.6899;InbreedingCoeff=0.9045;MQ=61.61;MQ0=9;MQRankSum=-1.230;QD=33.79;ReadPosRankSum=4.266;VQSLOD=3.5146;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,53:61:40.46:2156,40,0	0/0:16,0:16:45.14:0,45,745	0/0:28,0:10:9.13:0,9,60	0/0:27,0:8:9.91:0,10,162	0/0:30,0:30:87.02:0,87,1278	0/0:24,0:24:66.11:0,66,1012	0/0:37,0:37:90.39:0,90,1429	0/0:23,0:23:57.10:0,57,797	0/0:23,0:23:63.01:0,63,882	0/0:27,0:27:72.20:0,72,1186	0/0:20,0:20:56.19:0,56,897	0/0:25,0:25:69.11:0,69,1028	0/0:19,0:19:45.15:0,45,778	0/0:36,0:36:96.25:0,96,1484	0/0:18,0:18:54.17:0,54,894	0/0:15,0:15:45.14:0,45,738	0/0:28,0:28:81.23:0,81,1330	0/0:27,0:27:69.17:0,69,1112	0/0:15,0:14:35.87:0,36,544	0/0:30,0:30:66.16:0,66,1064	0/0:43,0:44:84.83:0,85,1557	0/0:20,0:20:53.57:0,54,774	0/0:25,0:25:57.15:0,57,898	0/0:15,0:15:45.15:0,45,761	0/0:21,0:21:60.19:0,60,1009	0/0:46,0:46:99:0,117,1872	0/0:17,0:16:45.06:0,45,706	0/0:26,0:26:75.18:0,75,1185
chr10	938931	.	AT	A	91.62	PASS	AB=0.778;AC=2;AF=0.036;AN=56;BaseQRankSum=4.200;DP=523;FS=3.342;HRun=11;HaplotypeScore=61.9648;InbreedingCoeff=-0.0378;MQ=65.19;MQ0=1;MQRankSum=0.227;QD=3.27;ReadPosRankSum=-0.891;VQSLOD=-0.5080;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,2:27:38.32:0,38,605	0/0:7,0:7:21.01:0,21,212	0/1:13,0:10:12.05:12,0,97	0/0:14,2:12:18.05:0,18,172	0/0:28,1:29:53.55:0,54,769	0/0:17,0:17:42.11:0,42,448	0/0:12,0:12:24.06:0,24,256	0/0:31,0:31:87.21:0,87,921	0/0:20,0:20:54.14:0,54,576	0/0:34,0:33:87.20:0,87,910	0/0:21,0:21:60.15:0,60,640	0/0:13,0:13:30.08:0,30,320	0/0:20,0:20:48.10:0,48,501	0/0:19,0:19:42.07:0,42,436	0/0:23,1:24:35.49:0,35,575	0/0:14,0:14:23.73:0,24,236	0/1:3,12:15:62.75:164,0,63	0/0:22,0:22:50.96:0,51,525	0/0:16,0:15:42.07:0,42,430	0/0:17,0:17:45.11:0,45,480	0/0:5,0:5:12.01:0,12,119	0/0:14,0:14:39.08:0,39,408	0/0:27,0:28:43.68:0,44,697	0/0:11,0:11:24.02:0,24,255	0/0:21,0:21:48.12:0,48,512	0/0:16,0:16:42.10:0,42,442	0/0:23,1:24:35.50:0,35,576	0/0:17,0:17:45.04:0,45,445
chr10	941661	.	AGT	A	181.91	PASS	AB=0.932;AC=14;AF=0.269;AN=52;BaseQRankSum=4.331;DP=582;FS=2.083;HRun=0;HaplotypeScore=98.9800;InbreedingCoeff=0.0081;MQ=50.38;MQ0=16;MQRankSum=-1.131;QD=0.71;ReadPosRankSum=1.084;VQSLOD=1.5598;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:36,0:30:2.80:13,3,0	0/0:9,0:9:15.02:0,15,185	./.	./.	0/0:13,0:13:3.01:0,3,46	0/0:26,1:25:5.87:0,6,91	0/0:20,0:19:27.09:0,27,394	0/0:26,0:18:2.98:0,3,21	0/0:15,1:15:8.99:0,9,92	0/1:16,1:14:15.69:16,0,163	0/1:20,1:19:5.10:5,0,82	0/0:12,1:13:5.99:0,6,68	0/0:16,0:15:14.95:0,15,146	0/0:20,0:20:8.85:0,9,136	0/0:17,0:17:12.01:0,12,139	0/1:16,0:15:21.68:22,0,125	0/1:23,0:17:3.42:42,0,3	0/1:15,4:18:49.28:49,0,142	0/1:20,1:18:46.31:46,0,48	1/1:5,1:6:3.01:34,3,0	0/1:47,3:48:37.79:38,0,685	0/0:15,0:14:6.02:0,6,91	1/1:14,0:14:0.47:1,0,0	0/1:27,2:28:52.59:53,0,489	0/0:19,0:18:19.62:0,20,275	0/0:14,0:14:15.05:0,15,226	0/0:14,0:14:8.95:0,9,78	0/0:11,0:12:11.89:0,12,129
chr10	941714	.	G	GT	637.78	PASS	AB=0.809;AC=3;AF=0.054;AN=56;BaseQRankSum=5.818;DP=762;FS=8.533;HRun=1;HaplotypeScore=104.7010;InbreedingCoeff=-0.0639;MQ=41.56;MQ0=49;MQRankSum=-4.862;QD=6.44;ReadPosRankSum=-2.591;VQSLOD=-0.6697;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:19,18:29:99:421,0,99	0/0:12,0:12:18.01:0,18,230	0/0:101,0:17:45.13:0,45,564	0/0:112,0:11:27.09:0,27,345	0/0:11,0:9:6.02:0,6,78	0/0:23,0:22:17.05:0,17,208	0/0:17,0:15:32.84:0,33,378	0/0:22,0:18:51.15:0,51,633	0/1:18,7:24:99:294,0,369	0/0:19,0:17:48.14:0,48,606	0/0:17,0:16:14.91:0,15,170	0/0:17,0:17:29.64:0,30,374	0/0:18,0:16:30.10:0,30,381	0/0:19,0:18:26.95:0,27,349	0/0:14,0:14:21.07:0,21,272	0/0:21,0:20:23.90:0,24,283	0/1:36,1:25:22.92:23,0,121	0/0:20,0:20:48.16:0,48,620	0/0:16,0:12:23.94:0,24,279	0/0:16,0:16:35.15:0,35,455	0/0:57,0:53:99:0,105,1313	0/0:24,0:24:21.07:0,21,272	0/0:15,0:15:29.29:0,29,387	0/0:32,0:30:72.09:0,72,894	0/0:16,0:15:27.09:0,27,348	0/0:22,0:20:57.01:0,57,679	0/0:13,0:12:20.76:0,21,247	0/0:9,0:9:11.90:0,12,131
chr10	946627	.	CTATATAGTAT	C	1595.25	PASS	AB=0.976;AC=3;AF=0.058;AN=52;BaseQRankSum=8.360;DP=344;FS=2.501;HRun=0;HaplotypeScore=104.9032;InbreedingCoeff=0.4503;MQ=94.53;MQ0=2;MQRankSum=1.935;QD=20.19;ReadPosRankSum=-3.451;VQSLOD=1.7297;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:6:12.04:0,12,618	0/0:4,0:4:9.03:0,9,256	0/0:18,0:13:12.40:0,12,140	0/1:35,0:26:7.48:7,0,166	0/0:14,0:14:36.12:0,36,1345	0/0:18,0:18:51.17:0,51,2173	0/0:6,0:6:9.03:0,9,297	1/1:9,30:39:87.19:1687,87,0	0/0:8,0:8:12.04:0,12,487	0/0:13,0:13:12.04:0,12,619	0/0:10,0:10:27.08:0,27,700	0/0:5,0:5:15.05:0,15,659	0/0:6,0:6:18.06:0,18,839	0/0:4,0:4:6.02:0,6,309	0/0:6,0:6:9.03:0,9,422	0/0:6,0:6:12.04:0,12,553	0/0:23,0:23:63.22:0,63,2780	0/0:23,0:23:57.20:0,57,2689	0/0:17,0:17:39.13:0,39,1724	0/0:6,0:6:9.03:0,9,464	0/0:4,0:4:9.03:0,9,305	./.	0/0:6,0:6:9.03:0,9,231	./.	0/0:12,0:12:27.09:0,27,1257	0/0:15,0:15:36.12:0,36,1510	0/0:16,0:16:39.13:0,39,1716	0/0:18,0:17:45.15:0,45,2078
chr10	947625	.	A	ACTGTGTAGCAGAGGAGCACTGC	11831.21	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=3.718;DP=676;FS=17.621;HRun=0;HaplotypeScore=369.0967;InbreedingCoeff=0.9954;MQ=89.58;MQ0=0;MQRankSum=-11.839;QD=131.46;ReadPosRankSum=-1.551;VQSLOD=3.5319;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:33,5:41:69.21:5189,69,0	0/0:12,0:12:33.11:0,33,1666	0/0:30,0:30:87.16:0,87,3699	0/0:29,0:29:87.26:0,87,3469	0/0:26,0:26:75.24:0,75,3879	0/0:27,0:27:78.27:0,78,4427	0/0:23,0:23:66.16:0,66,3130	1/1:32,0:31:74.02:3990,74,0	0/0:23,0:22:54.17:0,54,3014	0/0:16,0:16:45.15:0,45,2297	0/0:11,0:11:24.08:0,24,1295	0/0:25,0:24:60.19:0,60,2944	0/0:24,0:24:66.21:0,66,3339	0/0:19,0:19:51.17:0,51,2991	0/0:39,0:39:99:0,108,5485	0/0:26,0:26:72.25:0,72,4233	1/1:7,6:16:27.09:2653,27,0	0/0:28,0:28:84.29:0,84,4640	0/0:16,0:16:48.16:0,48,2415	0/0:13,0:13:27.09:0,27,1360	0/0:62,0:62:99:0,175,9077	0/0:7,0:7:18.06:0,18,1014	0/0:12,0:12:30.09:0,30,1508	0/0:29,0:28:78.25:0,78,4237	0/0:17,0:17:44.11:0,44,2178	0/0:25,0:25:72.24:0,72,3805	0/0:20,0:19:60.19:0,60,3341	0/0:27,0:27:66.16:0,66,3628
chr10	947683	.	CCTTT	C	188.71	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.427;DP=663;FS=6.262;HRun=0;HaplotypeScore=109.2092;InbreedingCoeff=0.8837;MQ=61.48;MQ0=11;MQRankSum=-4.718;QD=31.45;ReadPosRankSum=-1.138;VQSLOD=2.9468;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:34:10.22:0,10,1203	0/0:12,0:12:36.12:0,36,824	0/0:16,0:10:14.12:0,14,340	0/0:16,0:10:16.50:0,17,456	0/0:15,0:15:45.15:0,45,1019	0/0:22,0:21:57.16:0,57,1375	0/0:32,0:32:91.20:0,91,2197	0/0:39,0:36:89.85:0,90,2129	0/0:27,0:26:71.27:0,71,1761	0/0:23,0:23:59.23:0,59,1473	0/0:9,0:8:24.08:0,24,573	0/0:26,0:24:66.06:0,66,1718	0/0:25,0:25:69.22:0,69,1755	0/0:18,0:18:51.17:0,51,1286	0/0:41,0:41:99:0,120,3047	0/0:25,0:25:75.20:0,75,1786	1/1:1,5:6:18.06:279,18,0	0/0:20,0:20:56.22:0,56,1452	0/0:13,0:8:21.07:0,21,491	0/0:7,0:7:18.06:0,18,427	0/0:64,1:64:99:0,185,4682	0/0:4,0:4:12.04:0,12,311	0/0:22,1:23:66.68:0,67,1530	0/0:36,0:35:99:0,102,2588	0/0:25,0:25:71.27:0,71,1840	0/0:34,0:34:96.33:0,96,2505	0/0:24,0:23:72.24:0,72,1796	0/0:23,0:23:68.25:0,68,1665
chr10	947705	.	CCTTT	C	389.52	PASS	AB=0.958;AC=4;AF=0.071;AN=56;BaseQRankSum=3.654;DP=587;FS=5.934;HRun=0;HaplotypeScore=97.2411;InbreedingCoeff=0.4015;MQ=56.63;MQ0=15;MQRankSum=-2.414;QD=5.56;ReadPosRankSum=-1.864;VQSLOD=1.5523;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:29,1:28:55.40:55,0,910	0/0:5,0:5:15.05:0,15,353	0/0:13,0:5:15.05:0,15,377	0/0:16,0:9:27.06:0,27,543	0/0:10,0:9:27.09:0,27,706	0/0:13,0:12:36.12:0,36,909	0/0:35,0:35:99:0,99,2506	0/1:35,2:34:99:307,0,1344	0/0:25,0:25:69.22:0,69,1699	0/0:16,0:16:45.15:0,45,1162	0/0:8,0:7:21.07:0,21,565	0/0:30,0:28:84.25:0,84,2225	0/0:23,0:23:69.23:0,69,1738	0/0:18,0:18:54.19:0,54,1393	0/0:35,0:35:99:0,102,2577	0/0:19,0:19:54.19:0,54,1468	1/1:2,1:3:9.03:135,9,0	0/0:17,0:16:48.13:0,48,1151	0/0:15,0:7:18.06:0,18,461	0/0:6,0:6:18.06:0,18,463	0/0:55,0:54:99:0,153,3840	0/0:8,0:8:20.36:0,20,523	0/0:18,1:19:55.07:0,55,1441	0/0:40,0:40:99:0,111,2822	0/0:23,0:23:66.20:0,66,1588	0/0:34,0:33:99:0,99,2494	0/0:19,0:19:52.40:0,52,1175	0/0:15,0:15:42.14:0,42,1053
chr10	947707	.	T	TGCC	458.93	PASS	AB=0.894;AC=4;AF=0.071;AN=56;BaseQRankSum=4.660;DP=588;FS=5.933;HRun=0;HaplotypeScore=91.5557;InbreedingCoeff=0.4016;MQ=56.52;MQ0=14;MQRankSum=-2.084;QD=6.46;ReadPosRankSum=-1.469;VQSLOD=1.5983;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:31,1:30:57.05:57,0,758	0/0:5,0:5:15.05:0,15,257	0/0:15,0:6:15.05:0,15,267	0/0:15,0:9:26.45:0,26,389	0/0:10,0:9:27.09:0,27,500	0/0:13,0:12:36.12:0,36,650	0/0:35,0:35:99:0,102,1774	0/1:28,8:32:99:331,0,978	0/0:25,0:25:69.19:0,69,1237	0/0:15,0:15:45.15:0,45,820	0/0:8,0:7:21.07:0,21,391	0/0:30,0:28:84.25:0,84,1530	0/0:23,0:23:69.23:0,69,1234	0/0:18,0:18:54.18:0,54,972	0/0:35,0:35:99:0,102,1805	0/0:19,0:19:54.19:0,54,1007	1/1:1,2:3:9.03:180,9,0	0/0:17,0:16:48.12:0,48,815	0/0:13,0:7:18.06:0,18,298	0/0:7,0:7:18.05:0,18,307	0/0:53,1:53:99:0,150,2685	0/0:8,0:8:21.01:0,21,344	0/0:19,0:19:54.66:0,55,990	0/0:41,0:41:99:0,114,1979	0/0:24,0:24:69.19:0,69,1155	0/0:34,0:33:99:0,99,1820	0/0:19,0:19:52.41:0,52,899	0/0:15,0:15:42.14:0,42,769
chr10	947756	.	CCTTT	C	86.40	PASS	AB=0.767;AC=1;AF=0.019;AN=52;BaseQRankSum=4.027;DP=478;FS=21.715;HRun=0;HaplotypeScore=81.3131;InbreedingCoeff=-0.0288;MQ=52.64;MQ0=29;MQRankSum=-3.819;QD=3.76;ReadPosRankSum=2.254;VQSLOD=0.0221;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:16,7:20:99:160,0,417	0/0:5,0:5:15.05:0,15,402	./.	0/0:12,0:4:6.49:0,6,126	0/0:6,0:6:15.05:0,15,400	0/0:10,0:9:27.09:0,27,736	0/0:31,0:31:93.28:0,93,2281	0/0:23,0:18:45.12:0,45,920	0/0:20,0:20:42.14:0,42,1079	0/0:18,0:15:45.15:0,45,1172	0/0:4,0:4:12.04:0,12,329	0/0:24,0:24:66.23:0,66,1730	0/0:12,0:12:36.11:0,36,887	0/0:16,0:16:48.16:0,48,1234	0/0:28,0:27:81.28:0,81,2144	0/0:15,0:15:42.14:0,42,1054	./.	0/0:17,0:16:48.02:0,48,1127	0/0:21,0:5:12.04:0,12,288	0/0:5,0:4:12.03:0,12,253	0/0:47,0:47:99:0,135,3420	0/0:8,0:8:24.08:0,24,606	0/0:13,0:13:39.09:0,39,875	0/0:46,0:46:99:0,126,3213	0/0:13,0:12:36.12:0,36,909	0/0:17,0:16:45.15:0,45,1158	0/0:12,0:11:33.11:0,33,853	0/0:12,0:11:15.05:0,15,394
chr10	947778	.	C	CCTTT	1050.89	PASS	AB=0.931;AC=6;AF=0.107;AN=56;BaseQRankSum=6.681;DP=418;FS=0.000;HRun=0;HaplotypeScore=70.2383;InbreedingCoeff=-0.1422;MQ=51.33;MQ0=34;MQRankSum=-3.475;QD=10.62;ReadPosRankSum=-0.338;VQSLOD=2.5561;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:21:77.82:275,0,78	0/0:3,0:3:9.03:0,9,168	0/0:16,0:5:7.26:0,7,64	0/0:10,0:3:3.76:0,4,17	0/0:5,0:5:12.02:0,12,164	0/0:11,0:10:29.29:0,29,390	0/0:29,0:29:68.23:0,68,833	0/1:25,0:22:6.05:6,0,405	0/1:17,0:16:99:362,0,171	0/0:16,0:15:42.08:0,42,523	0/0:5,0:4:9.02:0,9,114	0/0:21,0:20:49.79:0,50,904	0/0:12,0:11:33.09:0,33,494	0/0:12,0:11:33.08:0,33,574	0/0:23,0:21:51.13:0,51,701	0/0:8,0:8:13.12:0,13,307	0/0:5,0:4:8.99:0,9,114	0/0:14,0:13:35.13:0,35,506	0/0:14,0:5:12.03:0,12,145	0/0:4,0:4:6.02:0,6,116	0/0:48,0:43:99:0,104,1501	0/0:7,0:6:5.80:0,6,44	0/0:6,0:6:18.05:0,18,285	0/0:41,0:39:99:0,100,1558	0/0:9,0:9:27.08:0,27,434	0/1:14,0:12:66.66:328,0,67	0/1:14,0:12:99:124,0,124	0/1:2,4:6:23.99:75,0,24
chr10	947780	.	TGCC	T	475.98	PASS	AB=0.739;AC=4;AF=0.071;AN=56;BaseQRankSum=6.329;DP=406;FS=6.049;HRun=0;HaplotypeScore=62.3393;InbreedingCoeff=-0.1017;MQ=51.26;MQ0=30;MQRankSum=-1.370;QD=7.56;ReadPosRankSum=-0.489;VQSLOD=1.1029;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:16,6:21:99:125,0,181	0/0:3,0:3:9.03:0,9,201	0/0:14,0:5:14.96:0,15,143	0/0:10,0:3:5.99:0,6,58	0/0:5,0:5:12.01:0,12,159	0/0:11,0:10:30.10:0,30,557	0/0:29,0:29:71.85:0,72,1251	0/0:23,0:22:50.75:0,51,807	0/1:7,8:14:99:236,0,279	0/0:16,0:15:45.14:0,45,812	0/0:4,0:3:9.02:0,9,154	0/0:21,0:20:57.01:0,57,1024	0/0:12,0:11:33.07:0,33,631	0/0:12,0:11:33.11:0,33,622	0/0:20,0:18:51.11:0,51,888	0/0:8,0:8:23.87:0,24,409	0/0:5,0:4:9.03:0,9,172	0/0:16,0:15:44.87:0,45,763	0/0:12,0:4:12.04:0,12,223	0/0:4,0:4:8.95:0,9,165	0/0:49,0:44:99:0,114,2152	0/0:6,0:5:6.02:0,6,102	0/0:6,0:6:18.06:0,18,338	0/0:40,0:38:99:0,100,1777	0/0:10,0:9:27.09:0,27,535	0/1:6,7:11:99:182,0,190	0/1:11,2:11:41.85:42,0,288	0/0:7,0:6:7.55:0,8,82
chr10	947808	.	TGCC	T	240.23	PASS	AB=0.625;AC=3;AF=0.056;AN=54;BaseQRankSum=4.762;DP=373;FS=2.852;HRun=0;HaplotypeScore=53.7685;InbreedingCoeff=0.3880;MQ=46.84;MQ0=41;MQRankSum=-3.921;QD=10.92;ReadPosRankSum=-0.829;VQSLOD=2.7106;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,5:17:19.13:305,19,0	0/0:3,0:3:9.03:0,9,208	0/0:13,0:1:2.98:0,3,21	./.	0/0:2,0:2:3.01:0,3,50	0/0:11,0:9:24.08:0,24,516	0/0:30,0:30:74.96:0,75,1420	0/1:2,3:5:37.69:38,0,63	0/0:16,0:14:31.34:0,31,571	0/0:9,0:8:24.04:0,24,426	0/0:3,0:2:6.02:0,6,133	0/0:13,0:12:27.06:0,27,491	0/0:11,0:10:23.57:0,24,471	0/0:9,0:8:21:0,21,390	0/0:22,0:21:51.07:0,51,852	0/0:8,0:7:15.50:0,15,383	0/0:13,0:10:27.09:0,27,553	0/0:14,0:14:42.13:0,42,829	0/0:10,0:4:12.04:0,12,222	0/0:5,0:5:9.03:0,9,209	0/0:49,0:42:99:0,105,2092	0/0:6,0:5:9.03:0,9,160	0/0:5,0:3:9.03:0,9,191	0/0:36,0:33:78.64:0,79,1568	0/0:8,0:7:18.06:0,18,401	0/0:12,0:10:24.06:0,24,382	0/0:12,0:10:26.76:0,27,341	0/0:6,0:6:10.59:0,11,189
chr10	953182	.	G	GTGTATCAC	12539.04	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-7.122;DP=587;FS=27.368;HRun=0;HaplotypeScore=136.4138;InbreedingCoeff=0.9989;MQ=78.42;MQ0=0;MQRankSum=-13.454;QD=100.31;ReadPosRankSum=-0.212;VQSLOD=3.4787;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,16:25:45.15:2029,45,0	0/0:10,0:10:27.55:0,28,728	0/0:23,0:22:60.21:0,60,1642	0/0:18,0:16:45.15:0,45,1176	0/0:22,0:22:63.22:0,63,1844	0/0:28,0:28:78.25:0,78,2178	0/0:23,0:23:69.19:0,69,1798	1/1:11,6:22:63.20:2227,63,0	0/0:16,0:16:45.15:0,45,1317	0/0:23,0:23:66.21:0,66,1871	0/0:17,0:17:48.16:0,48,1351	0/0:26,0:26:75.24:0,75,2073	0/0:21,0:21:63.19:0,63,1718	0/0:24,0:24:72.25:0,72,2064	0/0:14,0:14:42.13:0,42,1110	0/0:24,0:24:72.19:0,72,1801	1/1:2,0:14:30.10:1175,30,0	0/0:32,0:32:93.28:0,93,2569	0/0:19,0:19:54.17:0,54,1389	0/0:16,0:16:48.15:0,48,1303	0/0:16,0:16:48.16:0,48,1406	0/0:25,0:25:72.23:0,72,1944	0/0:22,0:22:60.21:0,60,1757	0/0:23,0:23:66.23:0,66,1874	0/0:20,0:20:60.19:0,60,1643	1/1:6,19:26:69.24:3021,69,0	1/1:4,21:29:72.25:3235,72,0	1/1:3,4:8:21.07:853,21,0
chr10	953680	.	TA	T	1113.78	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.366;DP=488;FS=20.067;HRun=9;HaplotypeScore=46.9239;InbreedingCoeff=0.9682;MQ=63.27;MQ0=2;MQRankSum=-2.972;QD=20.63;ReadPosRankSum=-0.331;VQSLOD=2.0820;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,29:32:78.04:714,78,0	0/0:5,0:5:15.04:0,15,173	0/0:8,0:7:13.82:0,14,123	0/0:9,0:8:17.94:0,18,178	0/0:26,0:26:75.22:0,75,865	0/0:19,0:19:48.09:0,48,529	0/0:9,0:9:27.08:0,27,312	1/1:3,19:20:57.03:522,57,0	0/0:12,0:12:21.06:0,21,237	0/0:27,0:27:75.21:0,75,857	0/0:19,0:19:48.14:0,48,554	0/0:15,0:15:45.12:0,45,509	0/0:14,0:14:33.03:0,33,364	0/0:15,0:15:39.12:0,39,450	0/0:14,0:14:36.11:0,36,416	0/0:20,0:20:57.16:0,57,649	0/0:31,0:32:93.11:0,93,1053	0/0:24,0:23:48.07:0,48,525	0/0:15,0:13:39.12:0,39,450	0/0:24,0:24:72.21:0,72,831	0/0:12,0:12:36.11:0,36,415	0/0:7,0:7:21.06:0,21,239	0/0:7,0:7:18.05:0,18,208	0/0:11,0:11:30.09:0,30,346	0/0:32,0:32:87.26:0,87,1004	0/0:23,0:23:66.18:0,66,752	0/0:22,0:22:63.15:0,63,713	0/0:13,0:13:36.08:0,36,395
chr10	954490	.	GGT	G	283.54	PASS	AB=0.932;AC=17;AF=0.315;AN=54;BaseQRankSum=2.451;DP=651;FS=19.289;HRun=0;HaplotypeScore=95.8392;InbreedingCoeff=-0.2900;MQ=60.44;MQ0=21;MQRankSum=-0.313;QD=0.84;ReadPosRankSum=1.603;VQSLOD=0.2733;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:28:5.74:38,6,0	0/1:7,0:6:30.39:30,0,38	./.	0/0:46,0:20:0.47:0,0,1	0/1:20,0:20:8.11:8,0,301	0/1:11,4:15:17.68:18,0,164	0/1:25,0:25:30.94:31,0,284	0/0:27,0:26:17.81:0,18,120	0/1:13,1:16:77.28:77,0,231	0/1:23,1:24:46.16:46,0,171	0/0:16,0:16:12.04:0,12,167	0/1:16,0:16:3.54:4,0,270	0/1:22,2:24:17.08:17,0,292	0/1:13,4:18:15.30:15,0,156	0/1:20,0:20:0.14:0,0,349	0/0:16,0:16:27.06:0,27,354	0/1:24,0:24:6.92:16,0,7	0/1:28,2:30:56.09:56,0,392	0/0:21,0:21:4.08:0,4,129	0/0:17,0:17:4.54:0,5,400	0/0:35,11:44:4.14:0,4,315	0/1:14,0:14:14.33:14,0,153	0/0:16,0:15:7.28:0,7,185	0/1:32,2:35:49.44:49,0,614	0/1:15,4:19:5.66:6,0,301	0/0:18,0:22:10.82:0,11,277	0/0:18,0:24:7.70:0,8,268	0/0:14,0:13:8.90:0,9,64
chr10	954530	.	TGTGC	T	877.09	PASS	AB=1.000;AC=8;AF=0.143;AN=56;BaseQRankSum=5.416;DP=624;FS=2.939;HRun=0;HaplotypeScore=119.5595;InbreedingCoeff=0.3613;MQ=55.38;MQ0=19;MQRankSum=1.858;QD=6.70;ReadPosRankSum=-2.221;VQSLOD=2.3942;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:40,4:42:64.66:636,65,0	0/1:8,0:7:27.41:27,0,72	0/0:30,0:3:2.44:0,2,13	0/1:26,0:8:8.95:9,0,21	0/0:16,0:15:32.69:0,33,652	0/0:18,0:18:38.85:0,39,557	0/0:24,0:24:22.62:0,23,721	0/1:18,0:17:74.77:198,0,75	0/0:21,0:21:34.46:0,34,762	0/0:24,0:24:49.66:0,50,733	0/0:8,0:8:18.01:0,18,353	0/0:21,0:21:33.90:0,34,781	0/0:18,0:18:18.60:0,19,709	0/0:20,0:20:26.52:0,27,454	0/0:25,0:25:56.67:0,57,886	0/0:13,0:12:35.82:0,36,691	1/1:18,0:18:14.50:140,14,0	0/0:31,0:30:51.83:0,52,1126	0/0:13,0:12:12.12:0,12,399	0/0:25,0:25:68.64:0,69,1094	0/0:54,0:53:69.97:0,70,1237	0/0:16,0:16:3.20:0,3,409	0/1:16,0:16:8.08:8,0,441	0/0:42,0:41:76.20:0,76,1547	0/0:24,0:24:56.86:0,57,804	0/0:23,0:23:43.50:0,44,724	0/0:19,0:19:9.05:0,9,689	0/0:8,0:7:14.59:0,15,162
chr10	954532	.	TGCGCGC	T	306.84	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=5.501;DP=616;FS=6.547;HRun=0;HaplotypeScore=142.9987;InbreedingCoeff=0.6049;MQ=55.77;MQ0=17;MQRankSum=-4.746;QD=7.14;ReadPosRankSum=0.694;VQSLOD=1.9186;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:44:70.47:0,70,508	0/0:9,0:8:12.04:0,12,234	0/0:32,0:5:11.42:0,11,199	0/1:28,0:9:25.49:25,0,144	0/0:15,0:14:39.12:0,39,1073	0/0:18,0:18:39.13:0,39,1080	0/0:22,0:22:48.64:0,49,1290	0/0:19,0:18:34.22:0,34,223	0/0:19,0:19:57.20:0,57,1500	0/0:23,0:23:60.21:0,60,1656	0/0:8,0:8:18.06:0,18,569	0/0:20,0:20:51.14:0,51,1468	0/0:17,0:17:47.83:0,48,1282	0/0:19,0:19:42:0,42,976	0/0:21,0:21:48.16:0,48,1364	0/0:13,0:12:33.11:0,33,967	1/1:12,3:15:21.07:386,21,0	0/0:33,0:33:74.86:0,75,2340	0/0:12,0:11:30.10:0,30,791	0/0:26,0:26:69.24:0,69,1882	0/0:53,0:53:92.32:0,92,2583	0/0:16,0:16:36.12:0,36,852	0/0:15,0:15:36.11:0,36,854	0/0:41,1:42:99:0,106,2901	0/0:23,0:23:54.19:0,54,1437	0/0:23,0:23:57.67:0,58,1445	0/0:19,0:19:51.02:0,51,1374	0/0:9,0:8:15.05:0,15,351
chr10	954545	.	CGT	C	1314.67	PASS	AB=0.933;AC=5;AF=0.089;AN=56;BaseQRankSum=8.118;DP=654;FS=8.588;HRun=0;HaplotypeScore=107.4910;InbreedingCoeff=0.7666;MQ=61.65;MQ0=9;MQRankSum=-1.288;QD=16.23;ReadPosRankSum=1.717;VQSLOD=3.4941;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,36:46:74.81:946,75,0	0/0:4,0:3:9.03:0,9,150	0/0:43,0:9:20.67:0,21,235	0/0:41,0:19:33.79:0,34,500	0/1:13,1:14:10.77:11,0,365	0/0:21,0:21:54.18:0,54,897	0/0:17,0:17:39.10:0,39,596	0/0:24,0:24:63.20:0,63,997	0/0:19,0:19:51.17:0,51,843	0/0:25,0:25:57.19:0,57,936	0/0:7,0:7:18.06:0,18,299	0/0:19,0:19:45.08:0,45,697	0/0:23,0:23:51.13:0,51,801	0/0:19,0:19:48.13:0,48,771	0/0:20,0:20:48.16:0,48,790	0/0:13,0:13:27.09:0,27,449	1/1:3,18:21:38.43:486,38,0	0/0:39,0:39:99:0,100,1585	0/0:13,0:13:33.11:0,33,543	0/0:28,0:28:63.22:0,63,1043	0/0:56,0:55:97.01:0,97,1659	0/0:16,0:16:42.14:0,42,698	0/0:17,0:17:29.88:0,30,494	0/0:41,0:41:90.29:0,90,1469	0/0:22,0:22:45.15:0,45,748	0/0:20,0:20:51.17:0,51,824	0/0:19,0:19:42.10:0,42,643	0/0:6,0:6:18.06:0,18,299
chr10	955746	.	GC	G	840.77	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.938;DP=722;FS=3.617;HRun=4;HaplotypeScore=71.6150;InbreedingCoeff=0.9875;MQ=76.31;MQ0=0;MQRankSum=-1.891;QD=27.12;ReadPosRankSum=1.064;VQSLOD=2.8846;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,117,1569	0/0:7,0:7:21.07:0,21,294	0/0:23,0:21:48.84:0,49,643	0/0:16,0:14:31.30:0,31,385	0/0:14,0:14:42.13:0,42,570	0/0:20,0:20:60.20:0,60,840	0/0:39,0:39:99:0,105,1400	0/0:34,0:34:87.26:0,87,1171	0/0:22,0:22:63.20:0,63,863	0/0:33,0:33:84.27:0,84,1153	0/0:8,0:8:18.06:0,18,252	0/0:41,0:41:99:0,120,1658	0/0:35,0:35:99:0,105,1436	0/0:30,0:30:87.29:0,87,1214	0/0:39,0:39:99:0,108,1479	0/0:29,0:29:87.29:0,87,1217	1/1:2,29:31:78.24:936,78,0	0/0:25,0:25:72.22:0,72,989	0/0:16,0:16:39.10:0,39,512	0/0:18,0:18:48.15:0,48,652	0/0:49,0:49:99:0,138,1910	0/0:18,0:18:54.18:0,54,753	0/0:23,0:23:66.20:0,66,883	0/0:31,0:31:78.25:0,78,1073	0/0:16,0:16:42.11:0,42,537	0/0:17,0:17:45.13:0,45,597	0/0:35,0:35:99:0,102,1427	0/0:14,0:14:39.08:0,39,492
chr10	956084	.	T	TG	1301.52	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-7.855;DP=774;FS=2.096;HRun=6;HaplotypeScore=133.7395;InbreedingCoeff=0.9696;MQ=78.06;MQ0=0;MQRankSum=-0.276;QD=28.29;ReadPosRankSum=2.003;VQSLOD=2.0689;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:59,0:59:99:0,153,1552	0/0:12,0:12:33.07:0,33,336	0/0:22,0:22:53.33:0,53,515	0/0:16,0:16:32.49:0,32,330	0/0:29,0:29:66.13:0,66,673	0/0:20,0:20:57.08:0,57,570	0/0:20,0:20:48.10:0,48,489	0/0:32,0:32:63.12:0,63,636	0/0:29,0:29:81.18:0,81,824	0/0:25,0:25:66.14:0,66,665	0/0:14,0:14:42.10:0,42,428	0/0:29,0:29:87.20:0,87,885	0/0:28,0:28:81.18:0,81,826	0/0:16,0:16:39.09:0,39,398	0/0:37,0:37:99:0,105,1062	0/0:35,0:35:93.19:0,93,940	1/1:4,42:46:99:1396,111,0	0/0:26,0:26:69.11:0,69,693	0/0:29,0:29:78.13:0,78,781	0/0:39,0:39:99:0,116,1161	0/0:34,0:34:93.15:0,93,931	0/0:25,0:25:69.11:0,69,693	0/0:27,0:27:75.15:0,75,758	0/0:37,0:37:99:0,108,1100	0/0:22,0:22:60.13:0,60,612	0/0:36,0:36:87.17:0,87,880	0/0:26,0:26:72.16:0,72,734	0/0:4,0:4:12.03:0,12,122
chr10	956459	.	CA	C	670.66	PASS	AB=0.917;AC=8;AF=0.143;AN=56;BaseQRankSum=9.877;DP=704;FS=5.198;HRun=15;HaplotypeScore=88.7832;InbreedingCoeff=0.6562;MQ=69.90;MQ0=15;MQRankSum=1.478;QD=4.86;ReadPosRankSum=5.218;VQSLOD=2.3071;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,29:35:73.79:477,74,0	0/1:12,3:15:17.57:18,0,226	0/1:38,0:16:1.35:1,0,21	0/0:36,0:14:3.05:0,3,36	0/0:29,0:29:22.62:0,23,291	0/0:17,0:19:29.56:0,30,223	0/0:23,0:28:31.01:0,31,264	1/1:10,11:21:40.31:252,40,0	0/0:28,0:31:60.04:0,60,439	0/0:18,0:18:15.68:0,16,171	0/0:29,1:31:30.27:0,30,352	0/0:29,2:31:51.46:0,51,364	0/0:23,0:23:17.64:0,18,171	0/0:18,0:19:28.94:0,29,216	0/0:36,0:36:59.67:0,60,431	0/0:23,0:24:45.98:0,46,376	1/1:4,0:26:24.42:70,24,0	0/0:26,0:26:27.28:0,27,340	0/0:10,0:11:18.57:0,19,160	0/0:24,1:27:34.39:0,34,372	0/0:18,0:18:27.34:0,27,189	0/0:21,0:21:22.50:0,22,297	0/0:26,1:28:5.03:0,5,275	0/0:23,2:27:8.10:0,8,308	0/0:25,0:25:30.73:0,31,306	0/0:25,0:25:29.21:0,29,221	0/0:14,0:22:17.64:0,18,133	0/0:4,0:3:8.97:0,9,73
chr10	957708	.	CAAT	C	1176.24	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.321;DP=662;FS=1.679;HRun=0;HaplotypeScore=94.2427;InbreedingCoeff=0.9993;MQ=77.71;MQ0=0;MQRankSum=-0.856;QD=42.01;ReadPosRankSum=4.475;VQSLOD=4.7397;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,135,2994	0/0:12,0:12:36.12:0,36,861	0/0:25,0:25:65.32:0,65,1367	0/0:33,0:32:87.10:0,87,1701	0/0:21,0:21:62.52:0,63,1348	0/0:22,0:22:66.18:0,66,1415	0/0:24,0:24:72.11:0,72,1462	0/0:49,0:49:99:0,147,2953	0/0:17,0:17:48.14:0,48,1035	0/0:22,0:22:66.21:0,66,1517	0/0:19,0:19:57.20:0,57,1376	0/0:16,0:16:48.11:0,48,1028	0/0:21,0:21:63.18:0,63,1490	0/0:24,0:24:72.20:0,72,1571	0/0:20,0:20:60.14:0,60,1323	0/0:22,0:22:66.19:0,66,1477	1/1:0,28:28:69.24:1271,69,0	0/0:21,0:21:60.21:0,60,1474	0/0:19,0:19:54.14:0,54,1060	0/0:29,0:29:87.23:0,87,1933	0/0:34,0:34:99:0,102,2205	0/0:18,0:18:51.15:0,51,1088	0/0:20,0:20:59.95:0,60,1285	0/0:39,0:39:99:0,114,2521	0/0:14,0:14:42.02:0,42,875	0/0:22,0:22:65.78:0,66,1351	0/0:16,0:16:48.15:0,48,1126	0/0:10,0:10:30.06:0,30,636
chr10	959414	.	GAGA	G	979.23	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.130;DP=626;FS=0.000;HRun=0;HaplotypeScore=86.8303;InbreedingCoeff=0.9986;MQ=80.37;MQ0=0;MQRankSum=-2.733;QD=36.27;ReadPosRankSum=2.715;VQSLOD=4.0387;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:96.33:0,96,2211	0/0:14,0:14:42.14:0,42,969	0/0:15,0:15:42.04:0,42,896	0/0:18,0:18:51.14:0,51,1108	0/0:25,0:25:72.25:0,72,1660	0/0:19,0:19:57.20:0,57,1314	0/0:32,0:32:90.29:0,90,2030	0/0:25,0:25:69.23:0,69,1535	0/0:25,0:25:75.24:0,75,1685	0/0:15,0:15:42.14:0,42,966	0/0:23,0:23:69.24:0,69,1591	0/0:11,0:11:33.11:0,33,761	0/0:16,0:16:48.15:0,48,1063	0/0:21,0:21:63.20:0,63,1404	0/0:29,0:29:87.28:0,87,1920	0/0:18,0:18:54.19:0,54,1245	1/1:1,26:27:63.22:1074,63,0	0/0:21,0:21:63.22:0,63,1452	0/0:32,0:32:93.32:0,93,2145	0/0:14,0:14:42.13:0,42,924	0/0:31,0:31:93.32:0,93,2145	0/0:22,0:22:66.21:0,66,1415	0/0:25,0:25:72.22:0,72,1571	0/0:18,0:18:54.17:0,54,1166	0/0:31,0:31:87.30:0,87,2007	0/0:32,0:32:90.30:0,90,2034	0/0:23,0:23:63.20:0,63,1386	0/0:9,0:9:27.09:0,27,616
chr10	962756	.	TGTTGGG	T	850.54	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.485;DP=615;FS=0.000;HRun=0;HaplotypeScore=124.2125;InbreedingCoeff=0.9682;MQ=67.09;MQ0=3;MQRankSum=-4.728;QD=30.38;ReadPosRankSum=-2.285;VQSLOD=3.0556;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,99,3382	0/0:5,0:5:12.04:0,12,416	0/0:17,0:12:24.08:0,24,709	0/0:24,0:19:45.15:0,45,1430	0/0:45,0:45:99:0,135,4579	0/0:28,0:28:75.24:0,75,2468	0/0:19,0:19:39.13:0,39,1263	1/1:10,18:27:48.14:945,48,0	0/0:19,0:19:54.19:0,54,1806	0/0:30,0:29:78.25:0,78,2440	0/0:16,0:16:42.14:0,42,1440	0/0:21,0:21:57.20:0,57,1965	0/0:17,0:17:51.17:0,51,1703	0/0:14,0:14:39.13:0,39,1351	0/0:19,0:19:57.20:0,57,1939	0/0:16,0:16:42.13:0,42,1346	0/0:28,0:28:75.26:0,75,2410	0/0:19,0:19:57.20:0,57,1852	0/0:22,0:22:54.15:0,54,1613	0/0:20,0:20:54.19:0,54,1813	0/0:26,0:26:72.25:0,72,2390	0/0:22,0:22:63.19:0,63,2056	0/0:15,0:15:45.15:0,45,1499	0/0:26,0:26:75.26:0,75,2542	0/0:22,0:22:66.23:0,66,2287	0/0:27,0:27:72.23:0,72,2278	0/0:18,0:18:51.17:0,51,1647	0/0:14,0:14:42.14:0,42,1391
chr10	962848	.	GAAAAAAA	G	869.74	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=3.119;DP=495;FS=2.556;HRun=17;HaplotypeScore=112.9485;InbreedingCoeff=0.9311;MQ=52.18;MQ0=21;MQRankSum=0.574;QD=14.03;ReadPosRankSum=-0.581;VQSLOD=-0.1206;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:26:48.14:0,48,883	0/0:14,0:17:41.22:0,41,992	0/0:16,0:3:6.69:0,7,75	0/0:14,0:9:23.38:0,23,308	0/0:18,0:19:48.12:0,48,1169	0/0:10,0:12:30.09:0,30,713	0/0:14,0:12:30.99:0,31,889	1/1:9,30:38:67.10:868,67,0	0/0:7,0:19:29.70:0,30,205	0/0:16,0:20:45.11:0,45,1190	0/0:14,0:11:30.09:0,30,798	0/0:14,0:14:33.07:0,33,783	0/0:17,0:17:41.69:0,42,915	0/0:14,0:14:36.08:0,36,882	0/0:10,0:14:18.06:0,18,462	0/0:11,0:10:27.09:0,27,749	1/1:7,0:23:17.58:121,18,0	0/0:27,0:27:71.57:0,72,1774	0/0:21,0:19:46.39:0,46,1163	0/0:16,0:16:38.97:0,39,849	0/0:11,0:11:17.65:0,18,357	0/0:10,0:9:18.06:0,18,419	0/0:12,0:13:27.09:0,27,808	0/0:18,0:16:18.53:0,19,453	0/0:16,0:17:42.13:0,42,1072	0/0:21,0:20:46.52:0,47,942	0/0:11,0:11:30.09:0,30,655	0/0:19,0:19:36.11:0,36,880
chr10	964379	.	CA	C	582.05	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.948;DP=660;FS=2.057;HRun=10;HaplotypeScore=75.7884;InbreedingCoeff=0.8603;MQ=70.95;MQ0=7;MQRankSum=2.429;QD=16.63;ReadPosRankSum=0.175;VQSLOD=4.1034;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:44:99:0,114,1224	0/0:8,0:8:21.05:0,21,227	0/0:37,0:22:34.93:0,35,369	0/0:38,0:29:50.52:0,51,439	0/0:34,1:35:76.21:0,76,1061	0/0:23,1:23:36.66:0,37,599	0/0:19,0:19:47.95:0,48,504	0/0:4,0:30:71.19:0,71,370	1/1:2,17:19:38.99:339,39,0	0/0:32,0:32:78.21:0,78,862	0/0:18,0:18:42.11:0,42,465	0/0:12,0:12:32.92:0,33,346	0/0:9,1:10:4.11:0,4,273	0/0:16,0:16:16.20:0,16,405	0/0:23,2:25:8.05:0,8,545	0/0:12,0:12:36.10:0,36,397	1/1:2,14:16:41.99:365,42,0	0/0:20,2:22:7.97:0,8,528	0/0:20,1:20:34.10:0,34,597	0/0:26,1:27:49.15:0,49,770	0/0:20,0:20:51.12:0,51,554	0/0:25,1:26:31.84:0,32,712	0/0:28,0:28:72.12:0,72,763	0/0:25,0:25:72.18:0,72,788	0/0:27,0:27:69.17:0,69,748	0/0:31,0:31:84.21:0,84,915	0/0:25,0:25:62.95:0,63,666	0/0:12,0:12:27.04:0,27,281
chr10	966973	.	GTA	G	139.28	PASS	AB=0.978;AC=5;AF=0.089;AN=56;BaseQRankSum=6.480;DP=767;FS=1.011;HRun=0;HaplotypeScore=114.7803;InbreedingCoeff=0.2815;MQ=54.16;MQ0=19;MQRankSum=-1.429;QD=1.93;ReadPosRankSum=-2.426;VQSLOD=1.8896;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:15.96:0,16,1005	0/0:15,0:15:41.68:0,42,553	0/0:48,0:8:20.97:0,21,183	0/0:48,0:19:18.15:0,18,218	0/0:14,0:14:29.67:0,30,452	0/0:26,0:26:42.15:0,42,1002	0/0:32,0:32:66.32:0,66,1035	0/1:27,2:27:84.53:85,0,386	1/1:14,0:14:10.77:73,11,0	0/0:24,0:24:32.11:0,32,816	0/0:10,0:10:29.82:0,30,494	0/0:27,0:27:32.09:0,32,749	0/0:19,0:19:18.34:0,18,495	0/0:23,0:23:43.09:0,43,815	0/0:29,0:29:53.14:0,53,979	0/0:17,0:17:36.25:0,36,586	0/1:22,0:22:81.16:81,0,113	0/0:23,0:23:19.91:0,20,690	0/0:13,0:13:7.78:0,8,259	0/0:25,0:25:55.23:0,55,863	0/0:80,2:82:67.50:0,68,2425	0/0:36,0:35:64.73:0,65,1268	0/0:19,0:19:40.89:0,41,561	0/0:47,0:47:43.54:0,44,1519	0/0:22,0:23:31.40:0,31,791	0/0:19,0:18:13.70:0,14,556	0/0:29,0:28:8.87:0,9,904	0/1:7,0:7:18.32:18,0,157
chr10	966983	.	GCATC	G	43.75	PASS	AB=0.929;AC=4;AF=0.071;AN=56;BaseQRankSum=5.141;DP=730;FS=0.943;HRun=0;HaplotypeScore=137.1371;InbreedingCoeff=0.2997;MQ=54.33;MQ0=19;MQRankSum=-4.373;QD=0.87;ReadPosRankSum=-2.021;VQSLOD=2.4279;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:90.74:0,91,2564	0/0:14,0:14:39.09:0,39,944	0/0:50,0:8:24.08:0,24,688	0/0:57,0:23:54.02:0,54,1349	0/0:10,0:10:13.10:0,13,712	0/0:24,0:24:63.21:0,63,1776	0/0:30,0:30:81.28:0,81,2231	0/1:19,0:19:41.35:41,0,1127	1/1:0,11:11:2.61:55,3,0	0/0:22,0:22:62.23:0,62,1721	0/0:14,0:14:39.13:0,39,1002	0/0:25,0:25:71.43:0,71,1730	0/0:17,0:17:44.59:0,45,1182	0/0:21,0:21:60.21:0,60,1532	0/0:27,0:27:75.24:0,75,2013	0/0:18,0:18:54.19:0,54,1527	0/1:17,0:19:49.87:50,0,338	0/0:21,0:22:44.17:0,44,1625	0/0:13,0:13:39.13:0,39,1066	0/0:23,0:23:66.23:0,66,1835	0/0:75,0:75:99:0,165,5635	0/0:34,0:35:85.41:0,85,2670	0/0:16,0:16:42.14:0,42,1186	0/0:46,1:47:99:0,126,3385	0/0:19,1:20:54.18:0,54,1404	0/0:21,0:20:43.52:0,44,1557	0/0:26,0:27:46.49:0,46,2088	0/0:5,0:5:14.88:0,15,281
chr10	966999	.	A	ATGTGCG	652.10	PASS	AB=0.920;AC=5;AF=0.089;AN=56;BaseQRankSum=5.606;DP=722;FS=0.689;HRun=0;HaplotypeScore=165.8029;InbreedingCoeff=-0.0921;MQ=55.52;MQ0=12;MQRankSum=1.814;QD=6.27;ReadPosRankSum=-1.922;VQSLOD=2.0468;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:46,0:46:99:357,0,488	0/0:14,0:14:36.06:0,36,666	0/0:46,0:10:11.39:0,11,129	0/0:51,0:21:32.36:0,32,279	0/0:12,0:12:30.04:0,30,478	0/0:24,0:24:66.01:0,66,821	0/0:26,0:26:56.94:0,57,801	0/1:15,0:15:5.10:5,0,190	0/1:9,0:8:23.15:23,0,30	0/0:25,0:25:53.74:0,54,793	0/0:12,0:12:24.04:0,24,407	0/0:24,0:24:54.48:0,54,961	0/0:18,0:18:48.09:0,48,817	0/0:23,0:23:59.93:0,60,886	0/0:26,0:25:54.03:0,54,907	0/0:20,0:20:45.13:0,45,860	0/1:9,12:27:24.99:362,0,25	0/0:24,0:23:41.55:0,42,770	0/0:15,0:14:36.05:0,36,573	0/0:24,0:24:59.72:0,60,862	0/0:70,0:70:99:0,162,2627	0/0:34,0:34:87:0,87,1289	0/0:17,0:17:33:0,33,574	0/0:48,0:48:72.34:0,72,1857	0/0:13,0:13:35.99:0,36,503	0/0:23,0:23:66.17:0,66,1034	0/0:29,0:29:69.89:0,70,1205	0/1:7,0:7:16.16:16,0,188
chr10	967002	.	TGC	T	79.25	PASS	AB=0.978;AC=7;AF=0.125;AN=56;BaseQRankSum=7.742;DP=711;FS=5.895;HRun=0;HaplotypeScore=108.9727;InbreedingCoeff=0.1019;MQ=55.74;MQ0=12;MQRankSum=1.054;QD=0.71;ReadPosRankSum=1.656;VQSLOD=1.7752;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:62.76:0,63,926	0/0:14,0:14:27.52:0,28,548	0/0:40,0:10:3.40:0,3,144	0/0:48,0:18:30.07:0,30,262	0/0:13,0:13:32.04:0,32,409	0/0:23,0:23:28.36:0,28,504	0/0:27,0:27:59.64:0,60,771	0/1:18,0:18:18.45:18,0,334	1/1:9,0:8:5.90:40,6,0	0/0:28,0:28:64.92:0,65,909	0/0:11,0:11:26.95:0,27,370	0/0:24,0:24:23.49:0,23,868	0/0:19,0:18:23.30:0,23,600	0/0:23,0:23:65.08:0,65,859	0/0:26,0:25:39.14:0,39,766	0/0:19,0:19:6.79:0,7,623	0/0:27,0:27:3.01:0,3,188	0/1:24,0:23:3.97:4,0,533	0/0:14,0:13:30.50:0,30,457	0/0:23,0:23:62.17:0,62,753	0/0:68,0:68:99:0,127,2042	0/0:36,0:36:46.46:0,46,1147	0/0:14,0:14:24.06:0,24,523	0/0:46,1:47:82.66:0,83,1721	0/0:13,0:13:35.14:0,35,424	0/1:22,2:24:72.52:73,0,637	0/1:28,1:29:54.70:55,0,831	0/1:7,0:7:12.06:12,0,168
chr10	967288	.	C	CTCTG	1647.65	PASS	AC=8;AF=0.160;AN=50;BaseQRankSum=-1.127;DP=723;FS=1.601;HRun=0;HaplotypeScore=140.4847;InbreedingCoeff=0.8753;MQ=70.45;MQ0=1;MQRankSum=0.871;QD=15.84;ReadPosRankSum=-1.304;VQSLOD=3.4451;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:45,0:47:22.27:259,22,0	0/0:10,0:10:9.03:0,9,136	./.	./.	0/0:13,0:13:18.06:0,18,277	0/0:24,0:24:42.14:0,42,640	0/0:34,0:34:33.11:0,33,504	./.	0/0:34,0:33:22.41:0,22,341	0/0:22,0:22:21.07:0,21,321	0/0:12,0:12:12.03:0,12,162	0/0:24,0:25:45.14:0,45,651	0/0:26,0:26:30.08:0,30,439	0/0:31,0:32:36.10:0,36,512	0/0:32,0:32:48.15:0,48,711	0/0:25,0:25:45.13:0,45,643	0/0:33,0:33:11.81:0,12,80	0/0:28,0:28:48.16:0,48,736	0/0:27,0:27:6.02:0,6,92	0/0:11,0:11:14.92:0,15,228	0/0:54,0:55:76.82:0,77,1223	0/0:20,0:20:21.07:0,21,317	0/0:7,0:7:2.99:0,3,24	0/0:39,0:41:67.08:0,67,992	0/0:23,0:24:36.12:0,36,531	1/1:33,0:33:39.13:839,39,0	1/1:7,8:16:15.05:351,15,0	1/1:0,8:8:15.05:351,15,0
chr10	967853	.	G	GGTAGGA	3886.36	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-2.865;DP=566;FS=1.326;HRun=0;HaplotypeScore=119.5113;InbreedingCoeff=0.9893;MQ=84.65;MQ0=0;MQRankSum=-9.769;QD=73.33;ReadPosRankSum=-1.380;VQSLOD=3.7392;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,19:29:51.17:1787,51,0	0/0:5,0:5:15.05:0,15,360	0/0:18,0:18:36.14:0,36,1009	0/0:24,0:24:63.15:0,63,1374	0/0:21,0:21:60.19:0,60,1383	0/0:11,0:11:30.10:0,30,719	0/0:29,0:29:84.29:0,84,2015	0/0:19,0:19:48.16:0,48,1151	0/0:17,0:17:48.12:0,48,1102	0/0:33,0:33:96.33:0,96,2279	0/0:11,0:11:33.11:0,33,772	0/0:19,0:19:51.17:0,51,1198	0/0:22,0:22:63.22:0,63,1514	0/0:21,0:21:63.20:0,63,1467	0/0:27,0:27:78.27:0,78,1841	0/0:16,0:16:42.14:0,42,1010	1/1:4,19:24:60.21:2099,60,0	0/0:25,0:25:66.19:0,66,1503	0/0:23,0:23:66.22:0,66,1510	0/0:17,0:17:47:0,47,1152	0/0:32,0:32:93.29:0,93,2111	0/0:16,0:16:48.16:0,48,1120	0/0:15,0:15:42.62:0,43,1011	0/0:22,0:22:66.23:0,66,1529	0/0:15,0:15:45.15:0,45,1053	0/0:17,0:17:48.16:0,48,1154	0/0:31,0:31:84.29:0,84,1990	0/0:7,0:7:21.07:0,21,463
chr10	970383	.	A	AC	4044.51	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-11.325;DP=595;FS=8.716;HRun=1;HaplotypeScore=54.7138;InbreedingCoeff=0.9977;MQ=97.24;MQ0=0;MQRankSum=-2.690;QD=39.65;ReadPosRankSum=3.840;VQSLOD=3.9361;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,46:47:99:1798,120,0	0/0:7,0:7:21.07:0,21,273	0/0:25,0:25:69.21:0,69,875	0/0:33,0:33:93.26:0,93,1146	0/0:20,0:20:60.19:0,60,777	0/0:23,0:23:69.22:0,69,896	0/0:17,0:17:51.17:0,51,662	0/0:25,0:25:63.20:0,63,818	1/1:1,26:27:72.24:1078,72,0	0/0:25,0:25:75.22:0,75,956	0/0:17,0:17:48.13:0,48,594	0/0:16,0:16:45.15:0,45,584	0/0:9,0:9:24.08:0,24,311	0/0:21,0:21:63.17:0,63,775	0/0:19,0:19:57.19:0,57,740	0/0:20,0:20:51.15:0,51,648	1/1:2,26:28:78.26:1169,78,0	0/0:15,0:15:45.15:0,45,584	0/0:16,0:16:45.14:0,45,571	0/0:18,0:18:51.15:0,51,645	0/0:34,0:34:99:0,102,1320	0/0:17,0:17:51.17:0,51,661	0/0:13,0:13:36.12:0,36,467	0/0:18,0:18:51.17:0,51,662	0/0:22,0:22:66.21:0,66,857	0/0:20,0:20:60.20:0,60,779	0/0:28,0:28:84.27:0,84,1087	0/0:15,0:15:45.15:0,45,584
chr10	971530	.	GAGAGAC	G	689.19	PASS	AB=0.938;AC=5;AF=0.093;AN=54;BaseQRankSum=5.499;DP=678;FS=0.000;HRun=0;HaplotypeScore=139.9624;InbreedingCoeff=0.6447;MQ=73.99;MQ0=3;MQRankSum=-5.706;QD=8.95;ReadPosRankSum=0.316;VQSLOD=2.3291;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:26,10:36:6.02:99,6,0	0/0:16,0:16:27.08:0,27,783	./.	0/0:32,0:26:0.30:0,0,1	0/0:30,0:30:39.13:0,39,1243	0/0:24,0:24:42.11:0,42,1087	0/0:18,0:18:24.07:0,24,684	0/0:39,0:38:36.09:0,36,768	1/1:9,17:26:33.11:670,33,0	0/0:34,0:34:45.15:0,45,1285	0/0:30,0:30:31.10:0,31,871	0/0:14,0:14:27.09:0,27,801	0/0:16,0:16:24.08:0,24,774	0/0:21,0:21:54.17:0,54,1542	0/0:25,0:25:42.14:0,42,1230	0/1:14,1:15:39.83:40,0,496	0/0:23,0:23:57.17:0,57,1592	0/0:11,0:11:17.98:0,18,459	0/0:15,0:15:15.05:0,15,355	0/0:32,0:32:54.19:0,54,1666	0/0:25,0:25:45.15:0,45,1335	0/0:33,0:33:45.14:0,45,1242	0/0:35,0:35:42.14:0,42,1200	0/0:22,0:22:42.14:0,42,1196	0/0:23,0:23:36.12:0,36,1096	0/0:14,0:24:36.12:0,36,759	0/0:17,0:28:38.97:0,39,895	0/0:5,0:5:3.01:0,3,95
chr10	972634	.	GT	G	1304.74	PASS	AB=0.923;AC=7;AF=0.125;AN=56;BaseQRankSum=3.220;DP=627;FS=2.137;HRun=11;HaplotypeScore=79.1400;InbreedingCoeff=0.7472;MQ=68.57;MQ0=7;MQRankSum=-0.923;QD=15.91;ReadPosRankSum=2.609;VQSLOD=4.6224;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:25:41.61:0,42,188	0/0:12,1:13:2.43:0,2,231	0/0:45,1:25:9.37:0,9,180	0/0:38,0:16:29.37:0,29,237	0/0:29,1:31:59.37:0,59,804	0/0:35,0:35:87.20:0,87,920	0/0:12,1:13:8.38:0,8,281	0/0:4,1:23:28.96:0,29,247	0/0:19,0:19:29.46:0,29,124	0/0:25,0:25:60.15:0,60,636	0/0:18,0:18:30.95:0,31,315	0/1:11,1:12:14.90:15,0,255	0/0:16,0:16:41.31:0,41,419	0/0:12,0:12:30.05:0,30,305	0/0:19,1:20:25.22:0,25,411	0/0:21,0:21:59.41:0,59,572	0/0:25,0:25:41.71:0,42,191	0/0:12,0:12:27.07:0,27,287	0/0:21,0:19:20.48:0,20,404	0/0:31,0:33:83.40:0,83,847	0/0:9,0:9:24.06:0,24,256	0/0:21,1:25:35.03:0,35,524	0/0:28,0:31:77.66:0,78,752	0/0:16,1:16:17.46:0,17,385	0/0:11,1:15:11.27:0,11,302	1/1:1,24:26:73.94:594,74,0	1/1:5,25:31:67.94:547,68,0	1/1:0,13:13:35.96:296,36,0
chr10	972641	.	T	TTTG	2229.23	PASS	AB=0.955;AC=7;AF=0.125;AN=56;BaseQRankSum=-0.184;DP=632;FS=12.861;HRun=0;HaplotypeScore=105.7001;InbreedingCoeff=0.8370;MQ=70.55;MQ0=7;MQRankSum=-1.990;QD=23.72;ReadPosRankSum=2.417;VQSLOD=2.6965;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,23:27:45.06:914,45,0	0/0:10,0:10:30.09:0,30,425	0/0:50,0:27:27.47:0,27,339	0/0:43,0:20:36.62:0,37,343	0/0:30,0:30:90:0,90,1289	0/0:35,0:35:90.74:0,91,1362	0/0:14,0:14:42.07:0,42,540	0/0:23,0:23:22.02:0,22,221	1/1:0,0:20:33.11:446,33,0	0/0:26,0:26:69.19:0,69,999	0/0:15,0:15:34.65:0,35,478	0/0:12,0:12:36:0,36,490	0/0:17,0:17:45.14:0,45,655	0/0:14,0:14:39.09:0,39,503	0/0:20,0:20:52.04:0,52,744	0/1:20,0:21:17.30:17,0,759	1/1:5,20:25:50.54:1000,51,0	0/0:9,0:9:27.09:0,27,417	0/0:17,0:16:44.64:0,45,650	0/0:33,0:33:92.14:0,92,1310	0/0:8,0:8:24.08:0,24,378	0/0:26,0:26:71.40:0,71,905	0/0:27,0:27:76.84:0,77,1090	0/0:17,0:16:45.11:0,45,638	0/0:16,0:16:38.33:0,38,516	0/0:26,0:26:77.45:0,77,707	0/0:30,0:30:73.99:0,74,640	0/0:20,0:20:57.04:0,57,517
chr10	976688	.	T	TA	566	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=3.798;DP=497;FS=19.513;HRun=6;HaplotypeScore=45.1332;InbreedingCoeff=0.8720;MQ=48.79;MQ0=30;MQRankSum=-4.326;QD=14.51;ReadPosRankSum=-0.775;VQSLOD=1.5165;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,13:13:39.08:470,39,0	0/0:12,0:12:12.02:0,12,122	0/0:16,0:3:9.02:0,9,90	0/0:11,0:6:6.08:0,6,89	0/0:34,0:29:60.09:0,60,601	0/0:18,0:18:48.11:0,48,489	0/0:10,0:10:15.03:0,15,153	0/0:20,0:15:42.09:0,42,428	1/1:3,9:11:12.04:151,12,0	0/0:23,0:22:63.09:0,63,642	0/0:17,0:17:39:0,39,397	0/0:8,0:7:15.03:0,15,153	0/0:17,0:17:39.08:0,39,397	0/0:11,0:10:26.92:0,27,258	0/0:11,0:10:30.07:0,30,305	0/0:11,0:9:27.06:0,27,275	1/1:5,5:5:6.02:75,6,0	0/0:22,0:17:39.09:0,39,397	0/0:19,0:16:39.09:0,39,398	0/0:39,0:38:99:0,105,1068	0/0:11,0:10:27.06:0,27,275	0/0:23,0:21:45.10:0,45,459	0/0:22,0:19:48.11:0,48,489	0/0:12,0:11:21.05:0,21,214	0/0:17,0:17:39.08:0,39,398	0/0:29,0:29:84.18:0,84,851	0/0:27,0:26:48.10:0,48,488	0/0:17,0:14:30.07:0,30,306
chr10	978865	.	CA	C	501.86	PASS	AB=0.560;AC=5;AF=0.093;AN=54;BaseQRankSum=6.553;DP=506;FS=13.143;HRun=10;HaplotypeScore=45.2354;InbreedingCoeff=0.7375;MQ=51.00;MQ0=23;MQRankSum=-7.071;QD=9.29;ReadPosRankSum=1.461;VQSLOD=0.6758;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,25:21:35.99:312,36,0	0/0:8,0:7:21.05:0,21,226	0/0:13,0:2:4.83:0,5,39	0/0:5,0:2:3.01:0,3,33	0/0:31,3:32:48.84:0,49,747	0/0:18,0:18:33.08:0,33,358	0/0:15,0:12:27.07:0,27,295	./.	1/1:2,9:11:21:182,21,0	0/0:21,1:18:22.11:0,22,463	0/0:29,1:28:72.16:0,72,784	0/0:7,0:7:11.96:0,12,110	0/0:15,0:15:33.02:0,33,350	0/0:9,0:10:20.99:0,21,210	0/0:14,0:14:30.06:0,30,332	0/0:15,1:15:19.10:0,19,437	0/1:3,11:12:3.47:135,0,3	0/0:11,0:12:33.06:0,33,353	0/0:17,1:6:18.05:0,18,199	0/0:33,2:33:73.23:0,73,1029	0/0:18,0:18:42.11:0,42,464	0/0:26,0:24:54.08:0,54,582	0/0:29,0:27:72.01:0,72,761	0/0:15,0:15:33.02:0,33,350	0/0:23,0:23:54.14:0,54,591	0/0:23,0:23:69.17:0,69,744	0/0:23,0:23:54.14:0,54,589	0/0:12,0:11:21.06:0,21,232
chr10	979576	.	GA	G	179.69	PASS	AC=2;AF=0.045;AN=44;BaseQRankSum=3.316;DP=599;FS=9.728;HRun=2;HaplotypeScore=38.8550;InbreedingCoeff=0.5553;MQ=31.42;MQ0=117;MQRankSum=-0.613;QD=8.98;ReadPosRankSum=0.049;VQSLOD=0.0907;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:22:8.99:0,9,109	0/0:13,0:13:36.12:0,36,535	./.	./.	0/0:24,0:23:26.73:0,27,401	0/0:20,0:14:12.04:0,12,179	./.	./.	1/1:0,20:18:20.94:270,21,0	0/0:34,0:22:66.22:0,66,979	0/0:29,0:25:30.10:0,30,446	0/0:19,0:10:6.02:0,6,89	0/0:24,0:13:15.05:0,15,224	./.	0/0:33,0:23:21.06:0,21,293	0/0:17,0:11:11.83:0,12,179	0/0:30,0:15:6.02:0,6,90	0/0:20,0:10:6.02:0,6,90	0/0:18,0:5:15.05:0,15,225	0/0:27,0:25:72.19:0,72,1030	0/0:27,0:10:2.84:0,3,45	0/0:25,0:22:30.10:0,30,448	0/0:23,0:19:21.07:0,21,313	./.	0/0:20,0:18:36.12:0,36,536	0/0:32,0:17:51.16:0,51,742	0/0:28,0:20:20.86:0,21,307	0/0:15,0:10:9.03:0,9,134
chr10	979912	.	AG	A	3174.74	PASS	AB=0.923;AC=7;AF=0.125;AN=56;BaseQRankSum=10.859;DP=651;FS=0.000;HRun=3;HaplotypeScore=58.8206;InbreedingCoeff=0.8737;MQ=56.32;MQ0=24;MQRankSum=4.066;QD=25.60;ReadPosRankSum=1.770;VQSLOD=2.8387;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,44:46:89.61:1419,90,0	0/0:12,0:12:36.12:0,36,518	0/0:17,0:5:12.04:0,12,172	0/0:20,0:5:11.98:0,12,131	0/0:24,0:24:69.22:0,69,974	0/0:24,0:24:63.21:0,63,906	0/0:22,0:21:57.19:0,57,820	0/0:30,0:20:57.13:0,57,762	1/1:0,24:24:66.21:818,66,0	0/0:17,0:17:48.16:0,48,689	0/0:27,0:27:72.23:0,72,1019	0/0:16,0:16:48.16:0,48,691	0/0:20,0:20:57.18:0,57,799	0/0:17,0:17:51.17:0,51,735	0/0:19,0:19:42.14:0,42,603	0/1:22,2:24:2.16:2,0,858	1/1:0,30:30:87.27:1078,87,0	0/0:18,0:17:51.13:0,51,709	0/0:25,0:8:21.07:0,21,303	0/0:28,0:28:84.27:0,84,1192	0/0:43,0:43:99:0,126,1760	0/0:23,0:23:57.19:0,57,820	0/0:21,0:21:60.20:0,60,864	0/0:20,0:20:54.18:0,54,778	0/0:10,0:10:30.10:0,30,432	0/0:34,0:32:96.32:0,96,1383	0/0:24,0:23:72.24:0,72,1037	0/0:16,0:16:42.14:0,42,605
chr10	983917	.	A	AT	1898.98	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=-4.048;DP=492;FS=8.117;HRun=6;HaplotypeScore=49.9139;InbreedingCoeff=0.8290;MQ=66.02;MQ0=0;MQRankSum=-0.665;QD=23.74;ReadPosRankSum=1.074;VQSLOD=2.8362;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,23:25:69.18:850,69,0	0/0:8,0:8:21.05:0,21,214	0/0:12,0:12:29.65:0,30,284	0/1:15,0:13:10.65:11,0,160	0/0:23,0:23:63.14:0,63,642	0/0:19,0:19:51.11:0,51,520	0/0:13,0:13:33.06:0,33,330	0/0:17,0:17:33.07:0,33,337	1/1:0,17:17:45.14:566,45,0	0/0:33,0:33:87.19:0,87,887	0/0:25,0:25:75.17:0,75,765	0/0:12,0:12:33.07:0,33,337	0/0:5,0:5:12.03:0,12,122	0/0:10,0:10:27.06:0,27,275	0/0:15,0:15:45.07:0,45,449	0/0:11,0:11:33.06:0,33,330	1/1:2,20:22:32.71:620,33,0	0/0:24,0:24:66.15:0,66,673	0/0:20,0:20:48.10:0,48,485	0/0:36,0:36:99:0,102,1040	0/0:5,0:5:15.03:0,15,153	0/0:16,0:16:45.10:0,45,459	0/0:16,0:16:42.08:0,42,422	0/0:18,0:17:42.09:0,42,428	0/0:14,0:14:39.09:0,39,398	0/0:25,0:25:69.15:0,69,704	0/0:28,0:27:75.14:0,75,756	0/0:7,0:7:15.03:0,15,153
chr10	984720	.	TAGGTCCTG	T	3474.74	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=10.358;DP=485;FS=1.265;HRun=0;HaplotypeScore=126.1478;InbreedingCoeff=0.9887;MQ=77.78;MQ0=0;MQRankSum=-9.005;QD=84.75;ReadPosRankSum=1.860;VQSLOD=4.2939;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:63.22:0,63,2915	0/0:17,0:17:51.16:0,51,2184	0/0:10,0:10:30.10:0,30,979	0/0:13,0:13:23.88:0,24,1055	0/0:27,0:27:78.26:0,78,3502	0/0:24,0:24:72.25:0,72,3331	0/0:19,0:19:57.20:0,57,2507	0/0:25,0:25:75.25:0,75,3307	0/0:28,0:28:84.29:0,84,3602	0/0:23,0:23:69.24:0,69,3057	0/0:34,0:34:99:0,99,4340	0/0:7,0:7:21.07:0,21,973	0/0:7,0:7:21.07:0,21,973	0/0:17,0:17:51.18:0,51,2221	0/0:23,0:23:69.24:0,69,3126	0/0:13,0:13:39.13:0,39,1806	0/0:15,0:15:45.14:0,45,1922	0/0:10,0:10:27.09:0,27,1218	0/0:15,0:15:45.15:0,45,2017	0/0:24,0:24:72.25:0,72,3162	0/0:15,0:15:45.15:0,45,2084	0/0:16,0:16:48.16:0,48,2047	0/0:24,0:24:72.25:0,72,3144	0/0:5,0:5:15.05:0,15,695	0/0:12,0:12:36.12:0,36,1602	1/1:0,8:8:24.07:660,24,0	1/1:0,25:25:69.24:2089,69,0	1/1:0,8:8:24.08:727,24,0
chr10	985722	.	CACCTATGTGGATGAGCATGTATCTGCATG	C	2754.76	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.916;DP=627;FS=2.518;HRun=0;HaplotypeScore=435.3650;InbreedingCoeff=0.9763;MQ=85.45;MQ0=0;MQRankSum=-5.875;QD=153.04;ReadPosRankSum=3.514;VQSLOD=2.8450;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,123,14051	0/0:12,0:12:36.12:0,36,3937	0/0:27,0:27:78.25:0,78,5273	0/0:18,0:18:51.17:0,51,3274	0/0:33,0:33:99:0,99,11786	0/0:22,0:22:66.23:0,66,7233	0/0:26,0:26:78.25:0,78,8442	0/0:25,0:25:75.26:0,75,6094	1/1:0,18:18:36.12:2850,36,0	0/0:32,0:32:96.33:0,96,11736	0/0:32,0:32:96.33:0,96,10831	0/0:16,0:16:48.16:0,48,5737	0/0:17,0:17:51.18:0,51,5576	0/0:20,0:20:60.21:0,60,7800	0/0:22,0:22:66.23:0,66,8012	0/0:11,0:11:33.10:0,33,3733	0/0:20,0:20:60.18:0,60,6509	0/0:6,0:6:18.06:0,18,1973	0/0:24,0:24:72.24:0,72,6506	0/0:30,0:30:87.30:0,87,10555	0/0:33,0:33:99:0,99,10262	0/0:18,0:18:54.17:0,54,6194	0/0:22,0:22:66.23:0,66,7756	0/0:24,0:23:72.23:0,72,7720	0/0:15,0:15:45.15:0,45,4992	0/0:28,0:28:84.27:0,84,8913	0/0:30,0:30:90.31:0,90,10601	0/0:5,0:5:15.05:0,15,1916
chr10	986345	.	G	GAGAC	5195.46	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-11.664;DP=701;FS=2.139;HRun=0;HaplotypeScore=113.5981;InbreedingCoeff=0.9881;MQ=75.03;MQ0=0;MQRankSum=-1.474;QD=50.94;ReadPosRankSum=1.759;VQSLOD=5.4796;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,37:45:99:2507,102,0	0/0:11,0:11:27.05:0,27,412	0/0:33,0:32:68.78:0,69,920	0/0:45,0:43:62.14:0,62,931	0/0:22,0:22:51.17:0,51,845	0/0:23,0:24:66.19:0,66,1016	0/0:32,0:32:50.09:0,50,971	0/0:29,0:29:42.11:0,42,608	1/1:9,21:30:60.21:1474,60,0	0/0:27,0:27:63.05:0,63,1009	0/0:17,0:17:36.12:0,36,597	0/0:22,0:22:54.15:0,54,841	0/0:7,0:7:15.05:0,15,249	0/0:30,0:30:66.21:0,66,1069	0/0:17,0:17:42.09:0,42,636	0/0:24,0:24:57.19:0,57,945	1/1:9,18:27:51.18:1214,51,0	0/0:18,0:18:36.09:0,36,561	0/0:18,0:18:15.05:0,15,249	0/0:21,0:21:45.05:0,45,656	0/0:40,0:40:78.18:0,78,1259	0/0:26,0:26:72.12:0,72,1054	0/0:21,0:21:48.11:0,48,741	0/0:37,0:37:74.95:0,75,1175	0/0:21,0:21:57.19:0,57,945	0/0:21,0:21:45.10:0,45,684	0/0:25,0:25:54.15:0,54,843	0/0:10,0:10:30.10:0,30,497
chr10	987055	.	A	ACC	754.48	PASS	AC=4;AF=0.074;AN=54;BaseQRankSum=5.628;DP=567;FS=3.621;HRun=7;HaplotypeScore=74.9612;InbreedingCoeff=0.9919;MQ=67.73;MQ0=11;MQRankSum=0.291;QD=16.40;ReadPosRankSum=0.631;VQSLOD=1.0519;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:25:47.71:0,48,332	0/0:8,0:8:21.06:0,21,244	0/0:59,0:28:40.71:0,41,411	0/0:49,0:18:31.44:0,31,272	0/0:25,0:25:69.16:0,69,780	0/0:24,0:24:68.75:0,69,803	0/0:10,0:10:24.06:0,24,279	0/0:18,0:18:39.10:0,39,454	1/1:1,0:17:24.95:88,25,0	0/0:25,0:25:72.21:0,72,838	0/0:22,0:22:63.19:0,63,732	0/0:10,0:10:24.07:0,24,279	0/0:11,0:11:33.10:0,33,381	0/0:14,0:14:39.12:0,39,454	0/0:16,0:16:42.12:0,42,489	0/0:13,0:14:32.79:0,33,425	1/1:1,28:29:48.16:787,48,0	0/0:11,0:11:30.09:0,30,349	0/0:21,0:21:42.10:0,42,489	0/0:23,0:23:69.18:0,69,782	./.	0/0:21,0:21:54.14:0,54,618	0/0:27,0:27:75.22:0,75,874	0/0:7,0:7:21.06:0,21,244	0/0:17,0:17:51.13:0,51,582	0/0:23,0:22:66.19:0,66,765	0/0:23,0:23:57.16:0,57,664	0/0:13,0:12:36.11:0,36,419
chr10	987062	.	C	CA	627.06	PASS	AB=0.984;AC=5;AF=0.093;AN=54;BaseQRankSum=6.381;DP=598;FS=3.007;HRun=7;HaplotypeScore=71.1931;InbreedingCoeff=0.7937;MQ=71.03;MQ0=11;MQRankSum=0.684;QD=6.21;ReadPosRankSum=-1.672;VQSLOD=-0.1289;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:4,21:24:53.90:621,54,0	0/0:7,0:7:18.03:0,18,174	0/0:68,0:27:15.13:0,15,239	0/1:58,0:24:7.49:7,0,164	0/0:25,0:25:57.04:0,57,532	0/0:24,0:24:62.74:0,63,607	0/0:8,0:8:21.03:0,21,202	0/0:18,0:18:23.22:0,23,371	1/1:16,0:16:26.92:124,27,0	0/0:25,0:25:63.09:0,63,604	0/0:22,0:22:60.07:0,60,568	0/0:10,0:10:24:0,24,220	0/0:12,0:12:30.02:0,30,282	0/0:15,0:15:39.05:0,39,370	0/0:15,0:15:39.06:0,39,376	0/0:16,0:16:27.47:0,27,330	0/0:33,0:33:51.35:0,51,245	0/0:15,0:15:23.67:0,24,311	0/0:17,0:17:48.06:0,48,455	0/0:27,0:27:66.06:0,66,624	./.	0/0:21,0:21:54.06:0,54,510	0/0:31,0:31:84.06:0,84,785	0/0:11,0:11:26.97:0,27,246	0/0:18,0:18:45.07:0,45,434	0/0:25,0:24:66.09:0,66,633	0/0:19,0:19:54.09:0,54,520	0/0:13,0:12:36.06:0,36,347
chr10	987723	.	CTTT	C	1469.23	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=4.162;DP=553;FS=18.559;HRun=14;HaplotypeScore=86.4564;InbreedingCoeff=0.9534;MQ=70.92;MQ0=5;MQRankSum=-0.580;QD=19.85;ReadPosRankSum=5.020;VQSLOD=0.8042;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:9,32:42:74.96:856,75,0	0/0:10,0:10:18.06:0,18,330	0/0:23,0:14:10.37:0,10,194	0/0:16,0:14:14.82:0,15,151	0/0:20,0:22:42.03:0,42,586	0/0:16,0:16:39.04:0,39,555	0/0:16,0:16:45.11:0,45,779	0/0:23,0:27:63.06:0,63,880	0/0:6,0:19:35.05:0,35,280	0/0:27,0:28:69.14:0,69,1089	0/0:26,0:26:66.08:0,66,1120	0/0:13,0:13:27.07:0,27,443	0/0:6,0:7:19.29:0,19,294	0/0:12,0:13:35.45:0,35,510	0/0:14,0:14:27.06:0,27,438	0/0:18,0:19:54.18:0,54,967	1/1:3,29:31:63.19:735,63,0	0/0:13,0:15:39.08:0,39,608	0/0:25,0:26:55.93:0,56,871	0/0:21,0:21:48.10:0,48,743	0/0:17,0:17:33.48:0,33,470	0/0:14,0:15:31.86:0,32,472	0/0:18,0:21:53.38:0,53,757	0/0:14,0:16:45.10:0,45,729	0/0:8,0:10:18.01:0,18,229	0/0:21,0:22:42.57:0,43,668	0/0:34,0:35:97.48:0,97,1528	0/0:6,0:7:18.05:0,18,290
chr10	989018	.	CCTT	C	68.04	PASS	AC=2;AF=0.045;AN=44;BaseQRankSum=2.609;DP=1169;FS=2.470;HRun=0;HaplotypeScore=25.9842;InbreedingCoeff=0.4243;MQ=11.73;MQ0=783;MQRankSum=-0.104;QD=2.43;ReadPosRankSum=2.035;VQSLOD=1.1257;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:4:3.01:0,3,68	0/0:17,0:4:6.02:0,6,134	./.	./.	0/0:81,0:9:11.97:0,12,221	0/0:67,0:11:21.07:0,21,473	0/0:54,0:7:9.03:0,9,202	./.	1/1:18,10:8:9.03:150,9,0	0/0:121,0:6:18.03:0,18,359	0/0:39,0:11:18.06:0,18,406	0/0:25,0:10:18.06:0,18,404	0/0:41,0:17:27.09:0,27,609	0/0:23,0:10:15.52:0,16,338	0/0:24,0:7:12.04:0,12,242	0/0:33,0:13:33.11:0,33,715	./.	0/0:40,0:3:6.02:0,6,136	0/0:23,0:6:18.06:0,18,407	0/0:40,0:5:3.01:0,3,68	./.	0/0:70,0:12:17.84:0,18,406	0/0:46,0:10:12.04:0,12,270	./.	0/0:32,0:9:12.04:0,12,269	0/0:67,0:9:24.08:0,24,542	0/0:97,0:20:51.17:0,51,1121	0/0:23,0:1:3.01:0,3,68
chr10	989734	.	A	AG	3753.93	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-8.844;DP=491;FS=16.162;HRun=0;HaplotypeScore=48.7670;InbreedingCoeff=0.9878;MQ=83.15;MQ0=0;MQRankSum=-1.683;QD=38.70;ReadPosRankSum=1.994;VQSLOD=2.0565;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,55:56:99:2269,144,0	0/0:8,0:8:24.08:0,24,335	0/0:21,0:21:50.39:0,50,688	0/0:25,0:25:63.58:0,64,773	0/0:20,0:20:51.17:0,51,713	0/0:17,0:17:42.13:0,42,572	0/0:20,0:20:57.18:0,57,781	0/0:21,0:21:63.17:0,63,859	1/1:0,22:22:57.19:910,57,0	0/0:22,0:22:66.22:0,66,923	0/0:14,0:14:36.10:0,36,479	0/0:8,0:8:21.07:0,21,294	0/0:9,0:9:15.05:0,15,209	0/0:9,0:9:27.09:0,27,377	0/0:16,0:16:39.06:0,39,521	0/0:17,0:17:45.15:0,45,629	1/1:0,18:18:36.12:575,36,0	0/0:8,0:8:21.06:0,21,278	0/0:16,0:16:48.15:0,48,654	0/0:15,0:15:45.15:0,45,629	0/0:30,0:30:87.27:0,87,1197	0/0:17,0:17:44.63:0,45,607	0/0:10,0:10:24.08:0,24,335	0/0:16,0:16:48.16:0,48,671	0/0:14,0:14:39.13:0,39,545	0/0:9,0:9:27.08:0,27,360	0/0:25,0:25:69.16:0,69,940	0/0:7,0:7:21.07:0,21,294
chr10	991121	.	ACT	A	402.49	PASS	AB=0.955;AC=23;AF=0.442;AN=52;BaseQRankSum=4.048;DP=594;FS=8.417;HRun=0;HaplotypeScore=82.5384;InbreedingCoeff=-0.0333;MQ=60.84;MQ0=16;MQRankSum=1.557;QD=1.14;ReadPosRankSum=-0.027;VQSLOD=0.7137;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:28:25.57:36,0,26	0/1:15,0:14:22.17:22,0,38	./.	0/0:39,0:19:0.47:0,0,1	1/1:16,1:18:3.01:32,3,0	0/0:23,0:23:9:0,9,83	1/1:20,3:19:11.90:113,12,0	0/0:31,0:30:0.47:0,0,1	0/1:13,0:15:0:0,0,0	0/1:22,0:22:16.63:17,0,60	0/1:19,1:19:0.01:0,0,0	1/1:14,2:15:5.39:23,5,0	0/1:15,1:15:23.11:23,0,79	0/0:17,0:16:9.03:0,9,131	0/1:20,0:21:8.09:8,0,31	0/1:8,2:10:23.20:23,0,34	1/1:15,0:17:13.40:62,13,0	./.	0/1:22,0:21:12:37,0,12	0/1:21,0:20:3.07:3,0,66	0/1:22,0:22:10.90:11,0,124	0/0:27,1:26:6.02:0,6,143	0/1:18,0:18:73.29:75,0,73	0/1:26,3:30:48.41:48,0,212	1/1:18,0:19:2.84:14,3,0	0/0:17,0:17:12.01:0,12,147	0/0:27,0:27:21.05:0,21,276	0/0:11,0:11:5.98:0,6,64
chr10	991176	.	C	CTG	811.21	PASS	AB=0.979;AC=11;AF=0.196;AN=56;BaseQRankSum=8.009;DP=631;FS=2.051;HRun=0;HaplotypeScore=109.4146;InbreedingCoeff=0.3700;MQ=48.04;MQ0=49;MQRankSum=-5.875;QD=4.38;ReadPosRankSum=-4.099;VQSLOD=1.6932;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:29,2:37:26.72:387,27,0	0/0:8,0:8:15.02:0,15,163	0/0:26,0:5:12.92:0,13,136	0/0:39,0:5:12:0,12,124	0/1:17,1:19:20.43:20,0,210	0/0:26,0:23:27.53:0,28,474	0/0:29,0:28:44.79:0,45,485	0/1:27,0:27:93.63:333,0,94	1/1:12,0:12:2.94:18,3,0	0/0:21,0:20:42.12:0,42,492	0/0:13,0:12:14.84:0,15,144	0/0:19,0:18:42.11:0,42,480	0/0:27,0:26:69.02:0,69,775	0/0:22,0:22:43.86:0,44,555	0/1:17,0:15:44.96:45,0,219	0/0:14,0:12:30.09:0,30,352	1/1:10,8:17:11.91:132,12,0	0/1:17,1:17:25.58:26,0,342	0/0:24,0:23:7.74:0,8,339	0/0:22,0:21:45.11:0,45,527	0/0:33,0:33:57.02:0,57,674	0/0:28,0:27:34.94:0,35,429	0/0:16,0:17:14.91:0,15,176	0/1:36,0:33:2.93:3,0,528	0/0:8,0:8:21.05:0,21,235	0/0:19,0:18:25.93:0,26,258	0/0:28,0:28:53.86:0,54,611	0/0:14,0:11:21:0,21,234
chr10	991198	.	GTC	G	731.17	PASS	AB=0.854;AC=7;AF=0.125;AN=56;BaseQRankSum=7.836;DP=627;FS=5.716;HRun=0;HaplotypeScore=93.9974;InbreedingCoeff=0.4838;MQ=58.91;MQ0=11;MQRankSum=-3.254;QD=6.36;ReadPosRankSum=-4.924;VQSLOD=1.1869;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:36,1:37:54.99:83,0,55	0/0:6,0:6:15.03:0,15,236	0/0:26,0:12:27.06:0,27,324	0/0:47,0:23:24.21:0,24,466	0/0:17,0:17:15.45:0,15,441	0/0:28,0:27:51.48:0,51,958	0/0:30,0:30:34.42:0,34,1010	0/1:10,23:32:61:578,0,61	1/1:16,0:16:14.80:103,15,0	0/0:24,0:24:68.93:0,69,995	0/0:12,0:12:22.28:0,22,370	0/0:21,0:21:54.09:0,54,913	0/0:25,0:25:63.40:0,63,1304	0/0:27,0:26:61.74:0,62,1011	0/0:13,0:13:39.05:0,39,550	0/0:16,0:16:48.09:0,48,720	1/1:15,0:15:10.10:93,10,0	0/1:14,0:14:9.82:10,0,569	0/0:25,0:22:42.38:0,42,561	0/0:23,0:21:53.89:0,54,927	0/0:42,0:40:87.26:0,87,1392	0/0:24,1:25:33.37:0,33,665	0/0:15,0:15:26.73:0,27,373	0/0:32,0:32:81.08:0,81,1128	0/0:9,0:9:27.08:0,27,427	0/0:19,0:18:30.51:0,31,581	0/0:22,0:22:39.21:0,39,941	0/0:8,0:7:21.07:0,21,335
chr10	991334	.	CTG	C	611.32	PASS	AB=0.869;AC=18;AF=0.333;AN=54;BaseQRankSum=7.758;DP=761;FS=1.858;HRun=0;HaplotypeScore=105.3448;InbreedingCoeff=-0.2176;MQ=64.69;MQ0=22;MQRankSum=-0.424;QD=1.40;ReadPosRankSum=2.454;VQSLOD=1.9834;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:42:19.75:97,20,0	0/0:9,0:11:3.61:0,4,214	0/0:53,0:14:3.01:0,3,46	./.	0/0:12,0:16:24.03:0,24,269	0/1:11,5:17:74.23:74,0,248	0/1:29,3:32:31.48:31,0,371	0/0:32,0:31:37.84:0,38,503	1/1:3,0:17:17.04:84,17,0	0/1:30,2:32:12.43:12,0,638	0/1:17,2:19:9.72:10,0,275	0/1:21,3:24:64.71:65,0,344	0/1:23,0:24:11.81:12,0,412	0/1:14,1:15:12.71:13,0,252	0/1:32,6:38:77.94:78,0,629	0/1:12,3:15:9.71:10,0,266	0/0:22,0:30:9.48:0,9,95	0/0:15,0:15:23.52:0,24,334	0/1:19,5:23:47.83:48,0,186	0/0:25,1:26:5.29:0,5,487	0/1:51,6:58:18.53:19,0,706	0/0:22,1:25:3.24:0,3,611	0/1:9,3:13:91.46:91,0,145	0/1:36,7:45:77.07:77,0,749	0/1:16,4:22:51.63:52,0,270	0/0:11,0:25:58.15:0,58,627	0/0:11,0:24:32.69:0,33,326	0/0:8,0:12:23.26:0,23,264
chr10	992570	.	GT	G	2887.03	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.427;DP=590;FS=7.454;HRun=2;HaplotypeScore=57.1224;InbreedingCoeff=0.9970;MQ=98.38;MQ0=0;MQRankSum=-1.799;QD=33.57;ReadPosRankSum=4.307;VQSLOD=3.4401;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,45:45:99:1706,132,0	0/0:13,0:13:39.13:0,39,566	0/0:32,0:32:93.31:0,93,1355	0/0:28,0:28:75.12:0,75,1032	0/0:26,0:26:75.24:0,75,1096	0/0:15,0:15:42.13:0,42,611	0/0:21,0:21:63.21:0,63,944	0/0:22,0:22:66.22:0,66,972	1/1:0,25:25:63.20:818,63,0	0/0:26,0:26:75.25:0,75,1124	0/0:15,0:15:45.13:0,45,635	0/0:16,0:16:48.16:0,48,719	0/0:19,0:19:57.01:0,57,803	0/0:24,0:24:72.23:0,72,1045	0/0:24,0:24:72.23:0,72,1059	0/0:22,0:22:63.21:0,63,942	1/1:0,16:16:39.13:506,39,0	0/0:12,0:12:36.12:0,36,528	0/0:18,0:18:51.16:0,51,745	0/0:23,0:23:69.23:0,69,1019	0/0:25,0:25:72.24:0,72,1078	0/0:25,0:25:75.24:0,75,1104	0/0:21,0:21:60.19:0,60,876	0/0:22,0:22:63.21:0,63,944	0/0:13,0:13:39.13:0,39,583	0/0:17,0:17:51.17:0,51,764	0/0:19,0:19:57.18:0,57,834	0/0:6,0:6:18.06:0,18,270
chr10	993026	.	GTGAA	G	1920.29	PASS	AB=0.948;AC=10;AF=0.179;AN=56;BaseQRankSum=9.167;DP=632;FS=0.000;HRun=0;HaplotypeScore=101.2128;InbreedingCoeff=0.5520;MQ=66.63;MQ0=0;MQRankSum=-0.310;QD=14.44;ReadPosRankSum=1.280;VQSLOD=3.2537;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,99,2269	0/0:16,0:16:36.12:0,36,852	0/1:16,1:16:19.49:19,0,474	0/0:25,0:25:59.67:0,60,1169	0/0:29,1:30:10.17:0,10,1279	0/0:25,0:25:51.18:0,51,1228	0/1:20,1:21:4.85:5,0,806	0/0:18,0:18:42.13:0,42,955	0/0:26,0:26:66.14:0,66,1336	0/0:24,0:24:66.22:0,66,1565	0/0:21,0:21:54.19:0,54,1304	0/0:19,0:19:54.17:0,54,1279	0/0:19,0:19:48.15:0,48,1116	0/0:18,0:18:42.11:0,42,930	1/1:2,15:17:36.12:586,36,0	1/1:4,21:25:51.17:849,51,0	0/0:22,0:22:54.17:0,54,1248	0/1:15,1:16:13.83:14,0,751	0/0:16,0:16:33.11:0,33,736	0/0:23,0:23:60.21:0,60,1389	0/0:37,1:38:37.32:0,37,1894	0/0:29,0:29:60.17:0,60,1292	0/1:18,1:19:4.81:5,0,938	0/0:22,0:22:57.15:0,57,1305	1/1:4,14:18:36.12:599,36,0	0/0:21,0:21:48.15:0,48,1070	0/0:39,0:39:90.31:0,90,2165	0/0:10,0:10:24.08:0,24,592
chr10	1000967	.	A	ACCAAGTGGAGTGGCCTGAAC	20735.05	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=3.716;DP=740;FS=16.174;HRun=0;HaplotypeScore=364.4327;InbreedingCoeff=0.8366;MQ=90.53;MQ0=0;MQRankSum=-15.327;QD=152.46;ReadPosRankSum=-0.596;VQSLOD=3.6793;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:31,9:43:99:7178,105,0	0/0:12,0:12:36.12:0,36,1864	0/0:31,0:31:84.29:0,84,3490	0/0:31,0:31:87.20:0,87,3603	0/0:23,0:23:63.22:0,63,3370	0/0:20,0:20:60.21:0,60,3336	0/0:17,0:17:48.16:0,48,2647	0/0:29,0:29:81.28:0,81,3459	1/1:22,16:41:99:9567,114,0	0/0:45,0:44:99:0,114,5992	0/0:17,0:17:48.16:0,48,2607	0/0:30,0:30:87.30:0,87,4627	0/0:23,0:23:60.20:0,60,3017	0/0:27,0:27:81.27:0,81,4122	0/0:34,0:34:99:0,99,5268	0/1:30,0:30:99:207,0,3643	1/1:16,4:22:51.13:3782,51,0	0/0:14,0:14:42.14:0,42,2120	0/0:22,0:22:63.22:0,63,3079	0/0:21,0:21:57.20:0,57,2942	0/0:67,0:67:99:0,196,10291	0/0:26,0:26:72.24:0,72,3859	0/0:20,0:20:54.18:0,54,2774	0/0:24,0:24:72.25:0,72,3714	0/0:13,0:13:33.11:0,33,1508	0/0:25,0:25:69.24:0,69,3464	0/0:21,0:21:63.21:0,63,3304	0/0:12,0:12:36.12:0,36,1831
chr10	1002032	.	C	CT	484.86	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=1.621;DP=595;FS=0.000;HRun=7;HaplotypeScore=72.8774;InbreedingCoeff=0.8619;MQ=66.12;MQ0=1;MQRankSum=-2.812;QD=26.94;ReadPosRankSum=-0.330;VQSLOD=4.0174;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:81.08:0,81,764	0/0:14,0:14:33.05:0,33,319	0/0:18,0:17:4.13:0,4,207	0/0:14,0:10:21.03:0,21,202	0/0:27,0:27:78.11:0,78,748	0/0:17,0:16:45.06:0,45,429	0/0:24,0:24:60.09:0,60,579	0/0:33,0:33:81.06:0,81,770	1/1:3,15:18:48.15:580,48,0	0/0:28,0:28:69.09:0,69,662	0/0:19,0:19:54.09:0,54,521	0/0:14,0:14:39.06:0,39,376	0/0:13,0:13:30.04:0,30,289	0/0:16,0:16:45.07:0,45,434	0/0:24,0:24:60.09:0,60,579	0/0:17,0:17:42.06:0,42,405	0/0:24,0:24:63.09:0,63,608	0/0:13,0:13:30.04:0,30,290	0/0:16,0:16:36.04:0,36,343	0/0:31,0:31:81.11:0,81,777	0/0:18,0:18:48.04:0,48,451	0/0:32,0:32:87.14:0,87,839	0/0:20,0:20:45.07:0,45,434	0/0:24,0:24:60.09:0,60,579	0/0:17,0:17:51.07:0,51,487	0/0:26,0:26:69.09:0,69,658	0/0:33,0:33:93.14:0,93,893	0/0:10,0:10:18.03:0,18,174
chr10	1002047	.	GTT	G	1865.92	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=6.789;DP=601;FS=4.514;HRun=11;HaplotypeScore=77.7077;InbreedingCoeff=0.9672;MQ=64.69;MQ0=2;MQRankSum=-1.480;QD=23.32;ReadPosRankSum=2.338;VQSLOD=3.5642;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,34:35:78.19:830,78,0	0/0:14,0:14:39.12:0,39,579	0/0:17,0:14:30.97:0,31,322	0/0:14,0:7:12.60:0,13,98	0/0:26,0:28:77.22:0,77,1085	0/0:15,0:16:45.12:0,45,622	0/0:26,0:28:80.07:0,80,1086	0/0:8,0:31:9.93:0,10,161	1/1:3,13:16:36.08:382,36,0	0/0:23,0:26:68.16:0,68,925	0/0:19,0:21:59.68:0,60,848	0/0:14,0:14:39.11:0,39,560	0/0:11,0:12:26.56:0,27,352	0/0:16,0:17:44.62:0,45,632	0/0:23,0:23:66.22:0,66,1006	0/0:14,0:16:41.61:0,42,586	1/1:3,25:28:75.18:797,75,0	0/0:12,0:13:38.59:0,39,520	0/0:13,0:13:28.33:0,28,386	0/0:31,0:32:90.61:0,91,1279	0/0:11,0:14:32.57:0,33,414	0/0:33,0:36:91.79:0,92,1326	0/0:20,0:20:57.18:0,57,853	0/0:21,0:23:56.68:0,57,834	0/0:18,0:18:54.15:0,54,769	0/0:27,0:28:80.76:0,81,1206	0/0:36,0:36:93.29:0,93,1379	0/0:8,0:8:15.04:0,15,212
chr10	1002573	.	AT	A	1449.76	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.249;DP=571;FS=1.058;HRun=9;HaplotypeScore=56.9251;InbreedingCoeff=0.9890;MQ=69.85;MQ0=0;MQRankSum=-3.280;QD=20.42;ReadPosRankSum=3.176;VQSLOD=4.1666;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,34:36:99:906,99,0	0/0:7,0:7:21.06:0,21,242	0/0:18,0:18:36.57:0,37,407	0/0:11,0:10:18.05:0,18,208	0/0:34,0:34:96.21:0,96,1071	0/0:21,1:22:35.72:0,36,664	0/0:14,0:14:42.09:0,42,458	0/0:30,0:30:69.66:0,70,786	1/1:3,15:18:42.02:384,42,0	0/0:22,0:22:54.12:0,54,608	0/0:24,0:24:63.19:0,63,727	0/0:14,0:14:39.12:0,39,450	0/0:6,0:6:15.04:0,15,173	0/0:15,0:15:33.07:0,33,360	0/0:16,1:17:23.67:0,24,516	0/0:20,0:20:54.16:0,54,623	1/1:4,13:17:33.01:302,33,0	0/0:19,0:19:57.15:0,57,645	0/0:21,0:21:60.17:0,60,684	0/0:24,0:24:69.21:0,69,796	0/0:17,0:17:39.12:0,39,450	0/0:22,0:22:63.19:0,63,727	0/0:21,0:21:54.15:0,54,612	0/0:19,0:19:56.89:0,57,624	0/0:24,0:24:66.19:0,66,753	0/0:23,0:23:60.18:0,60,692	0/0:35,0:35:99:0,105,1211	0/0:21,0:21:60.61:0,61,661
chr10	1003559	.	GT	G	833.77	PASS	AB=0.917;AC=3;AF=0.054;AN=56;BaseQRankSum=5.798;DP=547;FS=0.000;HRun=9;HaplotypeScore=57.8952;InbreedingCoeff=0.7722;MQ=73.47;MQ0=0;MQRankSum=-2.243;QD=13.45;ReadPosRankSum=1.583;VQSLOD=3.2824;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,36:40:99:928,102,0	0/0:12,0:12:33.10:0,33,381	0/0:16,0:15:32.31:0,32,352	0/0:23,0:19:45.09:0,45,477	0/1:20,2:22:0.82:1,0,485	0/0:18,0:18:51.15:0,51,588	0/0:9,0:9:23.65:0,24,243	0/0:3,0:31:82.80:0,83,440	0/0:28,0:29:75.04:0,75,835	0/0:11,0:11:27.08:0,27,312	0/0:19,0:19:51.14:0,51,580	0/0:18,0:18:39.12:0,39,450	0/0:17,0:17:45.12:0,45,510	0/0:12,0:12:33.10:0,33,381	0/0:20,0:20:51.14:0,51,579	0/0:20,0:20:51.15:0,51,589	0/0:19,0:19:54.16:0,54,623	0/0:15,0:15:42.12:0,42,485	0/0:23,0:23:51.15:0,51,588	0/0:20,0:20:60.17:0,60,682	0/0:20,0:20:48.12:0,48,542	0/0:18,0:18:51.15:0,51,589	0/0:21,0:21:57.17:0,57,654	0/0:18,0:18:54.12:0,54,608	0/0:20,0:20:50.97:0,51,559	0/0:16,0:16:33.10:0,33,381	0/0:20,0:20:48.14:0,48,554	0/0:20,0:20:54.16:0,54,623
chr10	1004103	.	CACA	C	4267.03	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=12.243;DP=639;FS=2.496;HRun=0;HaplotypeScore=88.4668;InbreedingCoeff=0.9140;MQ=73.49;MQ0=0;MQRankSum=-2.534;QD=43.99;ReadPosRankSum=4.610;VQSLOD=6.6236;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,44:44:99:1949,117,0	0/0:13,0:13:39.13:0,39,881	0/0:20,0:20:59.99:0,60,1120	0/0:12,0:12:29.93:0,30,543	0/0:22,0:22:66.23:0,66,1496	0/0:28,0:28:84.28:0,84,1862	0/0:27,0:27:78.27:0,78,1768	0/0:26,0:26:72.24:0,72,1554	1/1:3,23:26:1.23:1019,1,0	0/0:33,0:33:96.32:0,96,2110	0/0:19,0:19:57.20:0,57,1275	0/0:26,0:26:78.27:0,78,1745	0/0:22,0:22:66.22:0,66,1455	0/0:24,0:24:72.25:0,72,1609	0/0:14,0:14:42.12:0,42,868	0/0:24,0:24:63.22:0,63,1428	1/1:0,27:27:78.27:1299,78,0	0/0:14,0:14:39.12:0,39,841	0/0:18,0:18:51.13:0,51,1105	0/0:21,0:21:63.22:0,63,1427	0/0:26,0:26:72.21:0,72,1449	0/0:27,0:27:78.26:0,78,1702	0/0:23,0:23:69.24:0,69,1563	0/0:18,0:18:51.18:0,51,1156	0/0:20,0:20:57.13:0,57,1239	0/0:33,0:33:90.31:0,90,2021	0/0:21,0:21:60.21:0,60,1359	0/0:11,0:11:33.11:0,33,737
chr10	1007905	.	TCA	T	552.07	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.163;DP=753;FS=0.710;HRun=0;HaplotypeScore=95.1810;InbreedingCoeff=0.7865;MQ=64.36;MQ0=6;MQRankSum=-0.071;QD=19.04;ReadPosRankSum=-2.832;VQSLOD=2.7029;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:69.17:0,69,1050	0/0:11,0:11:30.10:0,30,487	0/0:43,0:25:32.85:0,33,394	0/0:50,0:32:74.61:0,75,1068	0/0:34,0:35:32.39:0,32,998	0/0:17,1:18:8.48:0,8,642	0/0:25,0:25:57.19:0,57,925	1/1:11,18:29:54.15:647,54,0	0/0:29,0:29:62.77:0,63,1151	0/0:28,0:28:72.19:0,72,1135	0/0:20,0:20:57.19:0,57,925	0/0:15,0:15:33.11:0,33,535	0/0:20,1:21:17.55:0,18,791	0/0:27,0:27:75.26:0,75,1209	0/0:22,0:22:60.20:0,60,970	0/0:19,0:19:54.18:0,54,872	0/0:22,1:23:8.48:0,8,637	0/0:12,0:12:24.08:0,24,389	0/0:40,0:40:93.25:0,93,1329	0/0:39,1:40:47.62:0,48,1278	0/0:50,1:51:62.66:0,63,1507	0/0:21,0:21:54.18:0,54,868	0/0:33,1:34:44.59:0,45,1204	0/0:16,1:17:5.47:0,5,596	0/0:13,0:13:33.11:0,33,523	0/0:29,0:29:66.23:0,66,1071	0/0:26,1:27:29.55:0,30,978	0/0:19,1:20:17.52:0,18,790
chr10	1008183	.	AC	A	2504.16	PASS	AB=0.950;AC=8;AF=0.143;AN=56;BaseQRankSum=12.960;DP=637;FS=1.957;HRun=6;HaplotypeScore=68.0975;InbreedingCoeff=0.7894;MQ=76.82;MQ0=0;MQRankSum=0.745;QD=21.78;ReadPosRankSum=1.431;VQSLOD=3.0020;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,33:35:84.21:903,84,0	0/0:6,0:6:18.06:0,18,237	0/0:15,0:15:31.33:0,31,434	0/1:13,0:13:1.05:1,0,232	0/0:37,0:36:96.29:0,96,1232	0/0:29,0:29:81.26:0,81,1065	0/0:27,0:27:63.15:0,63,792	0/0:19,0:19:51.16:0,51,658	1/1:2,21:23:63.16:677,63,0	0/0:25,0:25:69.22:0,69,889	0/0:21,0:21:57.17:0,57,734	0/0:19,0:19:51.17:0,51,670	0/0:15,0:15:45.15:0,45,591	0/0:20,0:20:54.17:0,54,705	0/0:21,0:21:63.20:0,63,829	0/0:12,0:12:33.11:0,33,434	1/1:0,35:35:99:1064,99,0	0/1:8,1:9:5.16:5,0,289	0/0:22,0:22:57.16:0,57,731	0/0:22,0:22:60.19:0,60,787	0/0:56,0:56:99:0,156,2008	0/0:15,0:15:42.14:0,42,552	0/0:30,0:30:81.25:0,81,1047	0/0:17,0:17:48.16:0,48,631	0/0:18,0:18:54.18:0,54,711	0/0:25,0:25:72.23:0,72,947	0/0:24,0:23:72.22:0,72,930	0/0:27,0:27:81.25:0,81,1051
chr10	1008832	.	A	ATC	3647.04	PASS	AB=0.952;AC=7;AF=0.125;AN=56;BaseQRankSum=-7.318;DP=488;FS=4.674;HRun=0;HaplotypeScore=55.0753;InbreedingCoeff=0.8854;MQ=85.80;MQ0=1;MQRankSum=-4.435;QD=40.08;ReadPosRankSum=2.185;VQSLOD=5.6519;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,29:29:72.25:1388,72,0	0/0:3,0:3:9.03:0,9,137	0/0:17,0:17:45.15:0,45,689	0/0:17,0:17:49.37:0,49,657	0/0:11,0:11:30.10:0,30,459	0/0:22,0:22:60.20:0,60,918	0/0:7,0:7:18.06:0,18,276	0/0:41,0:41:99:0,111,1623	1/1:0,23:23:69.24:1332,69,0	0/0:25,0:25:75.24:0,75,1113	0/0:12,0:12:33.11:0,33,504	0/0:11,0:11:33.11:0,33,505	0/0:21,0:21:63.21:0,63,965	0/0:18,0:18:54.18:0,54,827	0/0:19,0:19:54.18:0,54,827	0/0:10,0:10:27.09:0,27,414	1/1:0,19:18:48.16:926,48,0	0/1:19,1:20:0.63:1,0,739	0/0:22,0:22:60.20:0,60,901	0/0:13,0:13:36.12:0,36,545	0/0:23,0:23:66.22:0,66,1011	0/0:10,0:10:30.10:0,30,459	0/0:11,0:11:30.10:0,30,459	0/0:8,0:8:24.07:0,24,347	0/0:11,0:11:33.11:0,33,505	0/0:24,0:24:69.23:0,69,1038	0/0:26,0:26:75.22:0,75,1101	0/0:15,0:15:45.15:0,45,686
chr10	1008919	.	A	ATCTG	1179.51	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=5.410;DP=441;FS=18.413;HRun=0;HaplotypeScore=80.3908;InbreedingCoeff=0.9581;MQ=71.60;MQ0=1;MQRankSum=-5.601;QD=19.99;ReadPosRankSum=-0.406;VQSLOD=1.8413;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:24,1:28:18:287,18,0	0/0:5,0:5:12.03:0,12,175	0/0:20,0:16:17.18:0,17,266	0/0:26,0:24:36.05:0,36,519	0/0:23,0:23:60.07:0,60,811	0/0:17,0:17:27.09:0,27,449	0/0:11,0:11:18.06:0,18,300	0/0:28,0:28:51.13:0,51,689	1/1:15,0:15:33.08:597,33,0	0/0:17,0:17:42.11:0,42,610	0/0:21,0:21:54.17:0,54,874	0/0:8,0:8:24.07:0,24,374	0/0:11,0:11:30.09:0,30,465	0/0:8,0:8:15.05:0,15,250	0/0:13,0:13:18.06:0,18,300	0/0:8,0:8:15.05:0,15,246	1/1:9,7:15:21.02:436,21,0	0/0:13,0:13:27.08:0,27,420	0/0:24,0:24:36.10:0,36,530	0/0:11,0:11:33.10:0,33,523	0/0:11,0:11:24.08:0,24,399	0/0:9,0:9:18.02:0,18,246	0/0:12,0:12:24.08:0,24,392	0/0:11,0:11:24.02:0,24,320	0/0:14,0:14:42.11:0,42,648	0/0:22,0:22:54.14:0,54,779	0/0:23,0:23:54.13:0,54,815	0/0:15,0:15:42.02:0,42,563
chr10	1008931	.	G	GTCTA	1214.98	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=6.737;DP=437;FS=17.903;HRun=0;HaplotypeScore=80.8108;InbreedingCoeff=0.6544;MQ=71.23;MQ0=1;MQRankSum=-6.221;QD=20.59;ReadPosRankSum=1.825;VQSLOD=1.8850;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:28:1.91:208,2,0	0/0:4,0:4:12.04:0,12,219	0/0:19,0:15:25.17:0,25,520	0/0:27,0:24:53.83:0,54,811	0/0:24,0:24:72.17:0,72,1162	0/0:12,0:12:30.09:0,30,535	0/0:10,0:10:23.98:0,24,382	0/0:30,0:30:84.19:0,84,1230	1/1:6,9:15:36.11:847,36,0	0/0:17,0:17:51.15:0,51,850	0/0:19,0:19:57.09:0,57,1027	0/0:9,0:9:27.08:0,27,466	0/0:14,0:14:42.07:0,42,653	0/0:8,0:8:24.03:0,24,356	0/0:10,0:10:27.04:0,27,413	0/0:7,0:7:18.02:0,18,304	0/1:16,0:15:35.96:278,0,36	0/0:13,0:13:33.07:0,33,550	0/0:18,0:18:48.12:0,48,768	0/0:15,0:15:39.10:0,39,661	0/0:10,0:10:27.07:0,27,477	0/0:10,0:10:26.08:0,26,374	0/0:12,0:12:30.08:0,30,503	0/0:11,0:11:30.06:0,30,471	0/0:15,0:15:45.13:0,45,799	0/0:23,0:23:66.17:0,66,1094	0/0:27,0:27:78.12:0,78,1182	0/0:14,0:14:42.14:0,42,739
chr10	1008969	.	AC	A	1818.70	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=10.008;DP=440;FS=12.384;HRun=2;HaplotypeScore=47.9534;InbreedingCoeff=0.9863;MQ=86.17;MQ0=0;MQRankSum=-6.108;QD=32.48;ReadPosRankSum=0.413;VQSLOD=1.9468;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,19:21:57.18:733,57,0	0/0:7,0:7:21.07:0,21,315	0/0:16,0:16:42.14:0,42,606	0/0:18,0:18:45.15:0,45,662	0/0:30,0:30:87.28:0,87,1284	0/0:13,0:13:36.12:0,36,538	0/0:10,0:10:30.10:0,30,448	0/0:27,0:27:81.26:0,81,1176	1/1:2,19:21:57.17:725,57,0	0/0:20,0:20:57.19:0,57,855	0/0:19,0:19:57.19:0,57,848	0/0:6,0:6:18.06:0,18,270	0/0:12,0:12:36.12:0,36,540	0/0:10,0:10:30.06:0,30,406	0/0:12,0:12:36.12:0,36,540	0/0:6,0:6:18.06:0,18,270	1/1:2,12:14:39.13:504,39,0	0/0:12,0:12:33.07:0,33,468	0/0:15,0:15:45.15:0,45,670	0/0:16,0:16:48.15:0,48,699	0/0:6,0:6:15.05:0,15,225	0/0:12,0:12:36.12:0,36,540	0/0:11,0:11:30.06:0,30,425	0/0:11,0:11:33.11:0,33,495	0/0:18,0:18:54.18:0,54,809	0/0:22,0:22:66.21:0,66,953	0/0:25,0:25:69.22:0,69,1012	0/0:30,0:30:90.24:0,90,1253
chr10	1010910	.	AT	A	1508.49	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=8.082;DP=710;FS=3.653;HRun=2;HaplotypeScore=63.9738;InbreedingCoeff=0.9916;MQ=59.41;MQ0=5;MQRankSum=2.989;QD=32.79;ReadPosRankSum=3.248;VQSLOD=3.7503;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,45:46:96.90:1603,97,0	0/0:14,0:14:42.14:0,42,627	0/0:16,0:6:18.03:0,18,229	0/0:30,0:17:31.96:0,32,598	0/0:22,0:22:66.21:0,66,967	0/0:36,0:36:99:0,105,1554	0/0:19,0:19:57.19:0,57,852	0/0:34,0:34:99:0,102,1499	0/0:27,0:26:78.26:0,78,1162	0/0:21,0:21:63.21:0,63,944	0/0:30,0:30:84.28:0,84,1236	0/0:16,0:16:48.15:0,48,698	0/0:26,0:26:78.24:0,78,1130	0/0:29,0:29:84.28:0,84,1256	0/0:33,0:33:99:0,99,1447	0/0:20,0:20:60.20:0,60,896	0/0:19,0:19:54.18:0,54,808	0/0:16,0:16:45.15:0,45,674	0/0:27,0:19:57.18:0,57,830	0/0:24,0:24:72.23:0,72,1059	0/0:30,0:30:90.29:0,90,1329	0/0:30,0:30:90.30:0,90,1346	0/0:19,0:19:57.15:0,57,826	0/0:28,0:28:84.28:0,84,1258	0/0:16,0:16:48.16:0,48,700	0/0:27,0:27:78.24:0,78,1129	0/0:32,0:32:96.31:0,96,1417	0/0:23,0:23:69.23:0,69,1034
chr10	1014745	.	TTC	T	520.39	PASS	AB=0.973;AC=19;AF=0.452;AN=42;BaseQRankSum=-1.049;DP=487;FS=0.000;HRun=0;HaplotypeScore=61.0030;InbreedingCoeff=0.1546;MQ=23.22;MQ0=202;MQRankSum=-2.017;QD=2.20;ReadPosRankSum=2.181;VQSLOD=1.3969;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	1/1:5,0:3:2.72:12,3,0	./.	./.	0/0:27,0:20:3.92:0,4,26	1/1:23,0:16:5.65:39,6,0	1/1:19,0:5:2.95:22,3,0	./.	./.	1/1:26,1:13:11.89:111,12,0	0/1:16,3:9:31.02:40,0,31	0/0:17,0:8:0.46:0,0,1	0/0:10,0:3:3.01:0,3,36	./.	1/1:13,0:10:1.11:19,1,0	0/1:11,0:6:18.13:18,0,35	0/0:30,0:6:3.01:0,3,40	0/0:30,0:10:6.02:0,6,74	0/0:15,0:8:11.72:0,12,103	0/0:18,0:11:12.04:0,12,150	0/0:9,0:3:0:0,0,0	1/1:21,0:14:2.12:22,2,0	0/0:17,0:10:6.46:0,6,51	0/1:39,0:16:8.38:8,0,27	1/1:20,0:14:2.90:16,3,0	0/1:20,0:12:30.94:137,0,31	0/1:20,0:13:6.04:204,0,6	./.
chr10	1019871	.	A	AT	824.84	PASS	AB=0.922;AC=10;AF=0.179;AN=56;BaseQRankSum=-1.150;DP=549;FS=7.685;HRun=12;HaplotypeScore=63.6477;InbreedingCoeff=0.4577;MQ=72.97;MQ0=1;MQRankSum=-0.802;QD=6.60;ReadPosRankSum=0.097;VQSLOD=1.7141;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,24:34:3.40:518,3,0	0/1:3,1:4:20.23:20,0,35	0/1:14,0:15:5.75:6,0,52	0/1:24,0:22:16.49:16,0,97	0/0:22,0:23:43.64:0,44,312	0/0:23,0:24:64.67:0,65,465	0/0:19,0:19:41.70:0,42,304	0/0:22,0:23:46.64:0,47,329	1/1:6,12:18:8.14:241,8,0	0/0:25,0:26:52.58:0,53,378	0/0:20,0:20:44.67:0,45,328	0/0:9,0:9:26.85:0,27,197	0/0:18,0:20:41.86:0,42,280	0/0:14,0:15:31.82:0,32,225	0/0:15,0:16:37.78:0,38,268	0/0:15,0:16:8.62:0,9,216	1/1:3,0:21:31.35:161,31,0	0/0:20,0:21:49.64:0,50,348	0/0:20,0:20:44.70:0,45,324	0/0:23,1:27:33.56:0,34,380	0/0:13,0:14:34.81:0,35,247	0/0:11,0:11:20.83:0,21,153	0/0:24,0:24:47.62:0,48,350	0/0:16,0:18:40.77:0,41,286	0/0:15,0:17:36.65:0,37,244	0/0:24,1:27:25.54:0,26,332	0/0:33,0:34:67.47:0,67,483	0/1:7,1:8:8.30:8,0,110
chr10	1020996	.	AC	A	1475.51	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.622;DP=590;FS=2.851;HRun=2;HaplotypeScore=59.7141;InbreedingCoeff=0.9993;MQ=88.59;MQ0=0;MQRankSum=-2.750;QD=32.79;ReadPosRankSum=1.586;VQSLOD=3.6820;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:90.29:0,90,1325	0/0:9,0:9:27.09:0,27,405	0/0:28,0:28:81.25:0,81,1161	0/0:17,0:16:42.11:0,42,600	0/0:25,0:25:75.20:0,75,1080	0/0:24,0:24:72.24:0,72,1079	0/0:19,0:19:54.17:0,54,790	0/0:22,0:22:66.22:0,66,989	1/1:0,24:24:63.20:818,63,0	0/0:23,0:23:69.23:0,69,1015	0/0:19,0:19:54.18:0,54,808	0/0:17,0:17:51.17:0,51,764	0/0:22,0:22:66.22:0,66,986	0/0:20,0:20:60.20:0,60,898	0/0:20,0:20:57.18:0,57,834	0/0:19,0:19:57.19:0,57,853	1/1:1,20:21:60.19:779,60,0	0/0:11,0:11:33.11:0,33,492	0/0:16,0:16:48.14:0,48,681	0/0:20,0:20:60.20:0,60,896	0/0:23,0:23:69.23:0,69,1034	0/0:21,0:21:63.21:0,63,944	0/0:20,0:20:57.19:0,57,854	0/0:15,0:15:45.15:0,45,670	0/0:20,0:20:60.19:0,60,881	0/0:28,0:28:81.27:0,81,1212	0/0:40,0:40:99:0,117,1743	0/0:16,0:16:48.16:0,48,719
chr10	1022231	.	AG	A	3539.43	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=11.035;DP=698;FS=6.988;HRun=5;HaplotypeScore=67.6966;InbreedingCoeff=0.9936;MQ=84.30;MQ0=0;MQRankSum=-5.197;QD=29.25;ReadPosRankSum=3.518;VQSLOD=4.2805;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,57:62:99:1736,153,0	0/0:19,0:19:57.19:0,57,779	0/0:23,0:23:57.19:0,57,772	0/0:23,0:23:56.44:0,56,672	0/0:26,0:26:72.17:0,72,946	0/0:22,0:22:60.18:0,60,790	0/0:30,0:30:84.23:0,84,1090	0/0:28,0:28:72.22:0,72,956	1/1:2,32:34:84.24:953,84,0	0/0:25,0:25:72.22:0,72,950	0/0:12,0:12:36.12:0,36,492	0/0:28,0:28:78.26:0,78,1067	0/0:17,0:17:51.17:0,51,696	0/0:24,0:24:60.18:0,60,788	0/0:21,0:21:63.20:0,63,845	0/0:17,1:18:17.13:0,17,622	1/1:0,25:25:75.21:851,75,0	0/0:8,0:8:18.06:0,18,246	0/0:28,0:28:84.25:0,84,1108	0/0:28,0:28:69.22:0,69,926	0/0:43,0:43:99:0,120,1624	0/0:16,0:16:42.14:0,42,574	0/0:24,0:24:66.18:0,66,856	0/0:25,0:25:72.24:0,72,985	0/0:18,0:18:51.17:0,51,697	0/0:22,0:22:63.20:0,63,847	0/0:33,0:33:93.31:0,93,1271	0/0:16,0:16:48.16:0,48,657
chr10	1022891	.	C	CTTT	705.56	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=8.451;DP=387;FS=25.355;HRun=10;HaplotypeScore=61.5174;InbreedingCoeff=0.8223;MQ=67.50;MQ0=0;MQRankSum=-0.916;QD=11.20;ReadPosRankSum=0.300;VQSLOD=-0.3830;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:3,0:22:37.11:276,37,0	0/0:3,0:3:2.97:0,3,36	0/1:11,0:9:0.02:0,0,76	0/0:10,0:10:18.08:0,18,161	0/0:17,0:18:37.41:0,37,471	0/0:9,0:10:20.97:0,21,237	0/0:11,0:11:33.10:0,33,401	0/0:22,0:22:51.10:0,51,608	1/1:2,3:5:9.03:173,9,0	0/0:12,0:12:23.99:0,24,292	0/0:17,0:17:45.12:0,45,547	0/0:7,0:8:20.98:0,21,237	0/0:12,0:13:39.05:0,39,455	0/0:8,0:8:24.02:0,24,274	0/0:13,0:13:30.02:0,30,353	0/0:12,0:11:21.01:0,21,255	1/1:4,2:24:42.93:392,43,0	0/0:18,0:17:45.12:0,45,547	0/0:13,0:13:26.96:0,27,312	0/0:17,0:18:49.44:0,49,598	0/0:16,0:16:36.05:0,36,424	0/0:12,0:12:33.09:0,33,401	0/0:17,0:18:51.06:0,51,602	0/0:7,0:7:11.99:0,12,146	0/0:18,0:18:33:0,33,388	0/0:11,0:11:21.02:0,21,255	0/0:15,0:15:42.12:0,42,510	0/0:21,0:21:54.10:0,54,626
chr10	1022999	.	G	GTT	2531.40	PASS	AC=44;AF=1.000;AN=44;DP=85;FS=0.000;HRun=1;HaplotypeScore=19.2460;InbreedingCoeff=-0.1041;MQ=47.29;MQ0=1;QD=30.87;VQSLOD=3.2081;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,8:8:18.05:242,18,0	1/1:0,2:1:3.01:55,3,0	./.	./.	1/1:2,5:5:5.98:78,6,0	1/1:0,3:3:9.03:165,9,0	./.	1/1:0,2:2:6.02:116,6,0	1/1:0,2:2:6.02:111,6,0	1/1:2,6:8:21:289,21,0	1/1:1,5:4:5.98:66,6,0	1/1:0,1:1:3.01:56,3,0	1/1:2,1:3:9:115,9,0	1/1:0,2:2:6.02:91,6,0	1/1:2,2:3:6:58,6,0	1/1:1,1:1:3.01:49,3,0	./.	1/1:2,1:3:8.96:132,9,0	1/1:1,4:2:6:79,6,0	./.	1/1:0,2:2:3.01:58,3,0	1/1:0,4:3:9.03:147,9,0	1/1:1,3:2:6.02:116,6,0	1/1:0,2:2:3.01:51,3,0	./.	1/1:0,7:6:18.02:304,18,0	1/1:0,3:4:12.04:173,12,0	1/1:0,1:1:3.01:55,3,0
chr10	1023002	.	CG	C	423.22	PASS	AC=30;AF=0.882;AN=34;BaseQRankSum=-0.069;DP=66;FS=0.000;HRun=5;HaplotypeScore=24.5858;InbreedingCoeff=0.1416;MQ=46.55;MQ0=0;MQRankSum=-0.901;QD=10.58;ReadPosRankSum=1.595;VQSLOD=-0.0035;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,5:7:11.46:57,11,0	1/1:0,2:1:3.01:31,3,0	./.	./.	./.	1/1:1,2:3:6.01:59,6,0	./.	0/0:2,0:2:0:0,0,0	1/1:1,1:2:3:29,3,0	1/1:2,1:3:2.90:30,3,0	0/0:2,3:3:2.68:0,3,11	1/1:0,1:1:3.01:31,3,0	1/1:1,1:2:3:29,3,0	1/1:1,1:2:2.37:8,2,0	1/1:0,2:2:2.22:7,2,0	./.	./.	1/1:0,1:1:3.01:32,3,0	1/1:0,4:1:3.01:31,3,0	./.	./.	1/1:1,3:3:5.16:25,5,0	./.	1/1:0,2:2:3:27,3,0	./.	./.	1/1:0,4:4:11.41:79,11,0	1/1:0,1:1:3.01:31,3,0
chr10	1023012	.	ATTC	A	215.10	PASS	AB=0.667;AC=15;AF=0.750;AN=20;BaseQRankSum=2.451;DP=43;FS=0.000;HRun=0;HaplotypeScore=25.4150;InbreedingCoeff=0.1294;MQ=46.62;MQ0=0;MQRankSum=-1.268;QD=11.95;ReadPosRankSum=2.451;VQSLOD=2.7985;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,4:5:3.01:37,3,0	1/1:1,0:1:3.01:36,3,0	./.	./.	./.	1/1:0,1:2:5.99:50,6,0	./.	./.	1/1:0,0:1:2.98:21,3,0	./.	./.	./.	1/1:0,1:1:3.01:37,3,0	./.	./.	./.	./.	0/0:1,0:1:2.98:0,3,21	0/0:4,1:1:2.97:0,3,20	./.	./.	./.	./.	1/1:1,1:2:3.01:38,3,0	./.	./.	0/1:2,1:4:12.01:48,0,12	1/1:0,1:1:3.01:35,3,0
chr10	1026515	.	C	CCCT	21025.97	PASS	AB=0.723;AC=23;AF=0.411;AN=56;BaseQRankSum=16.562;DP=1242;FS=15.032;HRun=0;HaplotypeScore=224.1480;InbreedingCoeff=-0.6970;MQ=83.81;MQ0=0;MQRankSum=-6.461;QD=20.43;ReadPosRankSum=1.716;VQSLOD=3.0269;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:52,38:90:99:1846,0,1711	0/0:24,0:24:69.23:0,69,1077	0/1:36,15:52:99:754,0,882	0/1:31,8:39:99:445,0,666	0/0:47,0:47:99:0,123,1944	0/1:16,15:31:99:841,0,591	0/1:25,17:42:99:1067,0,711	0/1:38,18:55:99:1128,0,927	0/0:48,0:48:99:0,138,2144	0/0:58,0:58:99:0,157,2504	0/0:36,0:36:93.22:0,93,1413	0/1:29,15:44:99:745,0,1067	0/1:17,20:37:99:1220,0,524	0/1:15,17:33:99:899,0,452	0/1:33,24:57:99:1326,0,1148	0/1:21,21:42:99:1211,0,681	0/1:29,8:37:99:429,0,1106	0/1:17,19:36:99:965,0,629	0/1:40,15:54:99:870,0,1134	0/1:20,10:30:99:576,0,738	0/1:46,29:77:99:1528,0,1504	0/1:23,15:39:99:746,0,910	0/1:18,11:29:99:428,0,722	0/1:32,24:57:99:1212,0,1154	0/1:19,10:29:99:513,0,760	0/1:30,18:49:99:950,0,1124	0/1:29,21:50:99:1107,0,1048	0/1:12,6:18:99:220,0,485
chr10	1026905	.	TC	T	1444.83	PASS	AB=0.700;AC=4;AF=0.071;AN=56;BaseQRankSum=11.473;DP=848;FS=100.868;HRun=2;HaplotypeScore=128.9096;InbreedingCoeff=-0.0869;MQ=92.43;MQ0=0;MQRankSum=-10.503;QD=11.94;ReadPosRankSum=-0.586;VQSLOD=-0.0106;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:59,0:59:99:0,154,2271	0/1:10,8:18:99:257,0,373	0/0:40,0:41:52.78:0,53,627	0/0:38,1:39:38.17:0,38,593	0/1:19,12:31:99:307,0,663	0/0:26,0:26:66.22:0,66,989	0/0:41,0:41:87.19:0,87,1238	0/0:55,0:55:99:0,111,1381	0/0:32,0:32:54.20:0,54,970	0/1:24,23:47:99:748,0,933	0/1:15,10:25:99:242,0,602	0/0:17,0:17:39.13:0,39,584	0/0:22,0:22:54.18:0,54,809	0/0:22,0:22:63.21:0,63,942	0/0:18,0:18:51.13:0,51,705	0/0:18,0:18:39.13:0,39,585	0/0:20,0:20:45.13:0,45,652	0/0:10,0:10:30.10:0,30,448	0/0:28,0:28:69.01:0,69,933	0/0:34,0:34:84.21:0,84,1139	0/0:53,0:53:99:0,141,2104	0/0:33,0:33:64.19:0,64,1049	0/0:39,0:39:78.28:0,78,1307	0/0:30,0:30:72.24:0,72,1079	0/0:27,0:27:61.27:0,61,1058	0/0:26,2:28:0.38:0,0,902	0/0:23,0:23:57.18:0,57,834	0/0:12,0:12:36.07:0,36,475
chr10	1027059	.	T	TCTC	3906.54	PASS	AB=0.821;AC=11;AF=0.196;AN=56;BaseQRankSum=14.311;DP=829;FS=3.220;HRun=0;HaplotypeScore=142.6995;InbreedingCoeff=-0.2540;MQ=91.25;MQ0=0;MQRankSum=-10.487;QD=9.94;ReadPosRankSum=-2.237;VQSLOD=3.0797;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,6:44:45.70:0,46,1747	0/1:15,8:23:99:455,0,634	0/1:30,8:38:99:199,0,1081	0/1:31,3:35:99:185,0,1046	0/1:28,8:37:99:373,0,1088	0/0:26,7:32:3.32:0,3,1082	0/0:26,5:31:75.26:0,75,1251	0/1:39,9:48:99:357,0,1266	0/0:25,1:26:72.23:0,72,1201	0/1:50,11:62:99:990,0,1680	0/1:21,10:32:99:602,0,854	0/0:12,2:14:36.11:0,36,583	0/0:20,5:25:54.18:0,54,908	0/0:20,1:21:60.20:0,60,1005	0/0:28,2:30:12.37:0,12,1228	0/1:17,6:23:14.77:15,0,815	0/0:22,4:26:66.22:0,66,1111	0/0:19,1:20:54.18:0,54,921	0/0:25,2:27:63.21:0,63,1058	0/1:27,4:31:99:200,0,999	0/0:39,3:42:99:0,102,1708	0/0:24,0:24:69.21:0,69,1124	0/0:21,0:21:60.21:0,60,1023	0/0:19,0:19:51.16:0,51,844	0/1:20,6:25:99:361,0,755	0/0:21,1:22:63.21:0,63,1048	0/1:31,7:38:99:170,0,1440	0/0:11,0:11:27.09:0,27,461
chr10	1027393	.	TCAGTC	T	4577.52	PASS	AB=0.841;AC=16;AF=0.286;AN=56;BaseQRankSum=13.027;DP=903;FS=88.726;HRun=0;HaplotypeScore=201.2228;InbreedingCoeff=-0.4001;MQ=85.10;MQ0=0;MQRankSum=-9.952;QD=9.12;ReadPosRankSum=-1.834;VQSLOD=0.3350;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:90,0:90:99:0,207,6333	0/0:24,0:24:69.24:0,69,2097	0/1:30,10:40:99:417,0,2115	0/1:21,5:26:99:331,0,1240	0/0:33,0:33:84.27:0,84,2383	0/1:24,6:30:99:310,0,2233	0/1:35,2:37:33.53:34,0,2871	0/1:29,19:48:99:1041,0,2126	0/0:45,0:45:99:0,99,3042	0/0:49,0:49:99:0,132,3900	0/0:29,0:29:81.28:0,81,2466	0/1:21,4:25:99:128,0,1856	0/1:28,6:34:99:240,0,2425	0/1:31,5:36:99:101,0,2803	0/1:20,7:27:99:259,0,1845	0/1:26,9:35:99:435,0,2172	0/0:35,0:35:93.32:0,93,2768	0/1:17,3:20:99:143,0,1415	0/1:18,5:23:99:279,0,1140	0/0:20,1:21:60.21:0,60,1852	0/1:30,4:34:99:169,0,2495	0/0:23,0:23:69.24:0,69,2201	0/0:21,0:21:63.22:0,63,2025	0/1:21,2:23:65.27:65,0,1845	0/0:22,1:23:66.23:0,66,2102	0/1:18,8:26:99:396,0,1523	0/1:32,6:37:99:229,0,2758	0/0:8,0:8:24.08:0,24,766
chr10	1028897	.	T	TA	1029.13	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=-3.431;DP=462;FS=0.000;HRun=9;HaplotypeScore=54.8340;InbreedingCoeff=0.7905;MQ=62.04;MQ0=0;MQRankSum=-0.295;QD=12.55;ReadPosRankSum=1.379;VQSLOD=2.7993;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,28:36:0.98:684,1,0	0/0:9,0:9:21:0,21,182	0/1:13,0:11:3.37:3,0,112	0/0:16,0:16:20.40:0,20,232	0/0:15,0:17:35.02:0,35,291	0/0:16,0:16:47.03:0,47,396	0/0:18,0:18:47.92:0,48,402	0/0:31,0:31:74.98:0,75,651	1/1:3,0:19:28.41:142,28,0	0/0:19,0:19:38.97:0,39,335	0/0:15,0:15:38.98:0,39,334	0/0:12,0:12:29.98:0,30,260	0/0:12,0:12:35.98:0,36,309	0/0:12,0:12:20.98:0,21,182	0/0:11,0:11:29.99:0,30,260	0/0:11,0:11:26.97:0,27,234	1/1:3,11:14:30.08:332,30,0	0/0:13,0:13:29.96:0,30,258	0/0:26,0:24:59.96:0,60,520	0/0:11,0:11:26.99:0,27,234	0/0:14,0:14:34.07:0,34,304	0/0:17,0:17:35.99:0,36,312	0/0:17,0:17:35.98:0,36,312	0/0:17,0:17:47.99:0,48,416	0/0:12,0:12:26.99:0,27,234	0/0:16,0:16:41.99:0,42,364	0/0:19,0:19:44.99:0,45,391	0/0:17,0:17:41.97:0,42,361
chr10	1029124	.	AG	A	788.90	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.416;DP=510;FS=3.956;HRun=3;HaplotypeScore=50.9706;InbreedingCoeff=0.8000;MQ=53.42;MQ0=11;MQRankSum=-0.249;QD=20.76;ReadPosRankSum=-0.459;VQSLOD=3.0231;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,36:36:72.22:884,72,0	0/0:4,0:4:9.03:0,9,129	0/0:11,0:4:9.03:0,9,129	0/0:16,0:6:15.05:0,15,216	0/0:17,0:16:42.14:0,42,605	0/0:13,0:13:30.10:0,30,432	0/0:25,0:25:60.20:0,60,863	0/0:19,0:13:36.12:0,36,516	0/0:23,0:23:60.10:0,60,791	0/0:14,0:14:42.14:0,42,604	0/0:9,0:9:24.05:0,24,309	0/0:23,0:23:54.11:0,54,742	0/0:12,0:12:33.03:0,33,449	0/0:23,0:23:63.21:0,63,907	0/0:24,0:24:63.20:0,63,889	0/0:7,0:7:21.06:0,21,285	0/0:37,0:36:84.28:0,84,1207	0/0:16,0:16:42.14:0,42,603	0/0:22,0:21:48.12:0,48,636	0/0:9,0:9:24.08:0,24,345	0/0:43,0:42:99:0,117,1659	0/0:11,0:11:30.10:0,30,432	0/0:14,0:13:33.11:0,33,474	0/0:26,0:26:69.22:0,69,976	0/0:14,0:12:30.09:0,30,416	0/0:21,0:20:54.17:0,54,750	0/0:17,0:15:45.15:0,45,648	0/0:2,0:2:6.02:0,6,86
chr10	1030432	.	T	TAA	768.17	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=6.617;DP=393;FS=0.000;HRun=10;HaplotypeScore=47.2607;InbreedingCoeff=0.8436;MQ=54.80;MQ0=10;MQRankSum=-1.483;QD=14.77;ReadPosRankSum=0.669;VQSLOD=0.8455;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,0:18:32.44:114,32,0	0/0:8,0:8:18.04:0,18,182	0/0:24,0:8:12.15:0,12,118	0/0:12,0:4:8.98:0,9,76	0/0:14,0:14:42.09:0,42,427	0/0:17,0:17:36:0,36,352	0/0:7,0:7:18.02:0,18,176	0/0:27,0:24:72.10:0,72,709	1/1:2,8:9:18.06:268,18,0	0/0:15,0:15:36:0,36,360	0/0:27,0:27:63.07:0,63,621	0/0:3,0:3:6.01:0,6,61	0/0:8,0:8:21.03:0,21,207	0/0:4,0:4:6.01:0,6,61	0/0:6,0:6:18.04:0,18,183	0/0:8,0:8:21.04:0,21,214	1/1:3,14:16:22.39:526,22,0	0/0:18,0:18:39.08:0,39,396	0/0:19,0:16:48.09:0,48,481	0/0:25,0:25:63.12:0,63,637	0/0:3,0:3:9.02:0,9,92	0/0:3,0:3:9.02:0,9,91	0/0:10,0:10:24.05:0,24,244	0/0:4,0:4:12.03:0,12,122	0/0:15,0:14:39.09:0,39,396	0/0:17,0:16:42.09:0,42,427	0/0:15,0:14:22.49:0,22,290	0/0:32,0:31:72.15:0,72,732
chr10	1031333	.	AC	A	506.49	PASS	AC=2;AF=0.038;AN=52;BaseQRankSum=5.105;DP=714;FS=0.000;HRun=1;HaplotypeScore=52.2623;InbreedingCoeff=0.6175;MQ=39.78;MQ0=123;MQRankSum=0.201;QD=16.34;ReadPosRankSum=0.732;VQSLOD=3.5180;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,19:23:0.41:581,0,0	0/0:14,0:13:24.08:0,24,383	./.	./.	0/0:28,0:23:24.08:0,24,382	0/0:27,0:27:51.17:0,51,815	0/0:17,0:13:21.07:0,21,335	0/0:37,0:8:24.08:0,24,382	0/0:20,0:20:45.15:0,45,719	0/0:37,0:27:78.27:0,78,1247	0/0:35,0:27:33.10:0,33,505	0/0:13,0:13:27.09:0,27,428	0/0:16,0:15:36.12:0,36,574	0/0:12,0:10:24.08:0,24,383	0/0:19,0:19:30.10:0,30,479	0/0:22,0:21:30.10:0,30,479	0/0:42,0:38:42.14:0,42,657	0/0:19,0:15:33.11:0,33,527	0/0:21,0:12:36.12:0,36,575	0/0:29,0:25:23.96:0,24,383	0/0:34,0:27:45.15:0,45,719	0/0:27,0:22:18.06:0,18,288	0/0:32,0:26:27.09:0,27,431	0/0:25,0:22:42.10:0,42,643	0/0:18,0:14:15.05:0,15,236	0/0:27,0:22:66.22:0,66,1049	0/0:33,0:29:66.13:0,66,1019	0/0:17,0:17:12.04:0,12,182
chr10	1034348	.	GC	G	343.12	PASS	AC=6;AF=0.143;AN=42;BaseQRankSum=3.329;DP=684;FS=6.962;HRun=1;HaplotypeScore=26.1867;InbreedingCoeff=0.5979;MQ=16.65;MQ0=284;MQRankSum=0.845;QD=5.12;ReadPosRankSum=-0.690;VQSLOD=-0.0644;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,4:3:6.02:84,6,0	0/0:5,0:1:3.01:0,3,38	./.	./.	0/0:38,0:15:6.02:0,6,96	0/0:25,0:17:24.08:0,24,382	./.	./.	1/1:8,13:13:21.07:293,21,0	0/0:44,0:19:57.19:0,57,909	0/0:41,0:16:9.03:0,9,143	0/0:20,0:11:15.05:0,15,239	0/0:24,0:9:27.09:0,27,430	0/0:19,0:10:18.06:0,18,287	0/0:28,0:16:24.08:0,24,382	0/0:20,0:12:27.09:0,27,418	1/1:21,2:3:6.02:84,6,0	0/0:31,0:4:9.03:0,9,132	0/0:15,0:2:6:0,6,71	0/0:37,0:17:3.01:0,3,37	./.	0/0:38,0:13:9.03:0,9,143	0/0:27,0:8:3.01:0,3,48	0/0:34,0:1:3.01:0,3,48	./.	0/0:29,0:13:39.13:0,39,615	0/0:36,0:29:84.29:0,84,1338	./.
chr10	1036412	.	TC	T	872.13	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.781;DP=617;FS=11.549;HRun=3;HaplotypeScore=63.0604;InbreedingCoeff=0.9948;MQ=85.18;MQ0=0;MQRankSum=-2.580;QD=29.07;ReadPosRankSum=2.672;VQSLOD=2.4522;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:78.18:0,78,1041	0/0:8,0:8:21.07:0,21,302	0/0:14,0:14:42.13:0,42,549	0/0:24,0:24:62.82:0,63,797	0/0:22,0:22:63.20:0,63,888	0/0:24,0:24:69.21:0,69,959	0/0:24,0:24:69.21:0,69,974	0/0:42,0:42:99:0,114,1578	1/1:3,27:30:78.24:967,78,0	0/0:25,0:25:66.21:0,66,920	0/0:25,0:25:72.19:0,72,952	0/0:24,0:24:67.47:0,67,954	0/0:21,0:21:63.20:0,63,890	0/0:17,0:17:51.17:0,51,734	0/0:20,0:20:57.19:0,57,821	0/0:18,0:18:51.17:0,51,735	0/0:21,0:21:63.21:0,63,906	0/0:9,0:9:27.09:0,27,386	0/0:20,0:20:60.20:0,60,864	0/0:16,0:16:36.10:0,36,483	0/0:23,0:22:63.21:0,63,906	0/0:22,0:22:63.17:0,63,851	0/0:21,0:21:48.11:0,48,635	0/0:18,0:18:51.17:0,51,735	0/0:22,0:21:63.18:0,63,870	0/0:19,0:19:54.15:0,54,726	0/0:33,0:33:99:0,99,1406	0/0:24,0:24:72.24:0,72,1037
chr10	1036980	.	TA	T	1068.25	PASS	AC=6;AF=0.111;AN=54;BaseQRankSum=6.593;DP=299;FS=36.838;HRun=4;HaplotypeScore=38.6888;InbreedingCoeff=0.8735;MQ=84.37;MQ0=0;MQRankSum=-0.784;QD=24.28;ReadPosRankSum=2.950;VQSLOD=1.3404;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,16:19:45.03:504,45,0	0/0:3,0:3:9.03:0,9,120	0/0:10,0:9:11.54:0,12,173	0/0:12,0:11:14.43:0,14,154	0/0:7,0:7:21.07:0,21,280	0/0:11,0:11:33.04:0,33,390	0/0:6,0:6:18.06:0,18,240	0/0:26,0:26:75.21:0,75,934	1/1:0,2:2:3.01:36,3,0	0/0:14,0:14:39.10:0,39,502	0/0:13,0:13:33.57:0,34,423	./.	0/0:12,0:12:33.10:0,33,425	0/0:7,0:7:18.06:0,18,239	0/0:9,0:9:21.07:0,21,280	0/0:7,0:7:18.06:0,18,240	1/1:2,21:23:56.92:659,57,0	0/0:13,0:13:33.11:0,33,437	0/0:7,0:7:21.06:0,21,263	0/0:14,0:14:36.11:0,36,465	0/0:9,0:9:15.05:0,15,200	0/0:8,0:8:21.03:0,21,260	0/0:13,0:13:36.12:0,36,480	0/0:9,0:9:27.08:0,27,345	0/0:9,0:9:27.08:0,27,348	0/0:19,0:19:48.09:0,48,604	0/0:10,0:10:30.10:0,30,399	0/0:7,0:6:18.06:0,18,240
chr10	1037001	.	TAATA	T	224.56	PASS	AB=0.800;AC=11;AF=0.324;AN=34;BaseQRankSum=4.662;DP=209;FS=1.433;HRun=0;HaplotypeScore=43.7870;InbreedingCoeff=0.4404;MQ=79.87;MQ0=1;MQRankSum=-0.765;QD=4.24;ReadPosRankSum=1.434;VQSLOD=1.1480;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:10,0:11:3:28,3,0	1/1:0,2:2:6.02:92,6,0	./.	./.	0/0:4,0:4:3.01:0,3,70	0/0:7,0:7:9.03:0,9,204	./.	./.	./.	0/0:11,0:11:12.04:0,12,243	0/0:8,0:8:6.02:0,6,140	./.	0/0:7,0:7:6.02:0,6,140	./.	0/0:4,0:4:3.01:0,3,70	1/1:3,1:4:3.01:46,3,0	1/1:18,0:19:4.25:31,4,0	0/0:12,0:12:27.09:0,27,627	0/1:3,1:3:39.85:40,0,64	0/0:8,0:8:6.02:0,6,139	./.	./.	0/0:9,0:9:3.01:0,3,52	0/0:5,0:5:3.01:0,3,70	0/0:10,0:10:15.05:0,15,346	1/1:9,0:13:12.01:110,12,0	./.	./.
chr10	1037658	.	AAACAAC	A	1180.42	PASS	AB=0.958;AC=7;AF=0.125;AN=56;BaseQRankSum=7.215;DP=576;FS=34.600;HRun=0;HaplotypeScore=115.8863;InbreedingCoeff=0.8432;MQ=75.45;MQ0=1;MQRankSum=-7.983;QD=13.41;ReadPosRankSum=0.715;VQSLOD=1.3980;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,19:26:27.09:531,27,0	0/0:11,0:11:27.09:0,27,821	0/0:35,0:30:54.19:0,54,1564	0/0:32,0:28:45.12:0,45,1151	0/0:30,0:31:75.20:0,75,2302	0/0:23,0:23:60.19:0,60,1917	0/0:32,0:32:72.22:0,72,2178	0/0:21,0:21:51.17:0,51,1449	1/1:2,8:10:15.05:322,15,0	0/0:28,0:28:66.23:0,66,2041	0/0:17,0:17:36.12:0,36,1184	0/0:18,0:18:42.14:0,42,1376	0/0:19,0:19:51.17:0,51,1555	0/0:13,0:13:33.10:0,33,911	0/0:12,0:13:36.06:0,36,1044	0/1:22,1:23:7.29:7,0,1552	1/1:12,17:29:24.04:464,24,0	0/0:15,0:15:39.13:0,39,1294	0/0:16,0:15:24.08:0,24,761	0/0:18,0:18:51.17:0,51,1628	0/0:24,0:24:57.20:0,57,1814	0/0:16,0:16:42.14:0,42,1247	0/0:15,0:15:39.13:0,39,1233	0/0:33,0:33:90.31:0,90,2997	0/0:15,0:15:42.14:0,42,1326	0/0:18,0:18:45.15:0,45,1413	0/0:19,0:19:43.39:0,43,1325	0/0:6,0:6:12.04:0,12,402
chr10	1037807	.	G	GAGGA	849.12	PASS	AB=0.927;AC=10;AF=0.192;AN=52;BaseQRankSum=1.982;DP=581;FS=6.108;HRun=0;HaplotypeScore=100.2966;InbreedingCoeff=0.5189;MQ=55.42;MQ0=17;MQRankSum=-0.114;QD=5.44;ReadPosRankSum=-0.786;VQSLOD=1.6623;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:18,0:33:9.37:23,0,9	0/0:7,0:6:8.98:0,9,110	./.	./.	0/1:14,0:16:7.60:8,0,192	0/0:27,0:28:42.01:0,42,511	0/0:27,0:25:27.04:0,27,317	0/1:29,0:26:0:0,0,0	0/0:4,0:4:2.97:0,3,20	1/1:13,12:25:36.06:607,36,0	1/1:12,0:11:6.01:94,6,0	0/0:28,0:28:39.07:0,39,520	0/0:21,0:21:42.02:0,42,488	0/0:29,0:30:41.29:0,41,498	0/0:32,0:30:30.14:0,30,542	0/0:29,0:27:24.05:0,24,306	1/1:18,0:16:13.19:79,13,0	0/0:19,0:18:24.05:0,24,314	0/0:17,0:16:12.01:0,12,127	0/0:11,0:11:14.96:0,15,141	0/0:33,0:36:54.11:0,54,689	0/1:13,9:22:70.90:182,0,71	0/0:14,0:14:21.04:0,21,292	0/0:33,0:32:48.12:0,48,658	0/0:23,0:23:26:0,26,424	0/0:27,0:25:27.06:0,27,353	0/0:24,0:24:12.11:0,12,336	0/0:4,0:4:12.02:0,12,161
chr10	1038828	.	T	TATAC	1071.86	PASS	AC=2;AF=0.037;AN=54;BaseQRankSum=-0.978;DP=758;FS=2.301;HRun=0;HaplotypeScore=145.6351;InbreedingCoeff=0.7858;MQ=43.19;MQ0=76;MQRankSum=-1.653;QD=28.21;ReadPosRankSum=0.346;VQSLOD=3.7900;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:38:51.13:0,51,842	0/0:13,0:13:15.02:0,15,228	0/0:22,0:1:3.01:0,3,35	./.	0/0:23,0:23:29.79:0,30,498	0/0:19,0:18:24.08:0,24,431	0/0:24,0:21:11.55:0,12,214	0/0:33,0:29:66.12:0,66,1028	0/0:30,0:28:51.16:0,51,873	0/0:38,0:35:90.26:0,90,1520	0/0:15,0:15:24.07:0,24,402	0/0:33,0:33:51.17:0,51,910	0/0:20,0:16:24.07:0,24,402	0/0:24,0:23:27.09:0,27,471	0/0:34,0:32:51.17:0,51,907	0/0:22,0:21:42.14:0,42,748	1/1:7,30:35:45.15:1166,45,0	0/0:15,0:14:33.11:0,33,589	0/0:36,0:31:87.22:0,87,1449	0/0:21,0:21:33.11:0,33,593	0/0:50,0:44:83.79:0,84,1505	0/0:29,0:29:54.19:0,54,964	0/0:29,0:28:42.13:0,42,725	0/0:49,0:45:62.83:0,63,1113	0/0:14,0:14:14.54:0,15,262	0/0:25,0:24:66.21:0,66,1118	0/0:14,0:14:15.05:0,15,269	0/0:13,0:10:24.08:0,24,424
chr10	1039417	.	TAC	T	1208.33	PASS	AB=0.886;AC=15;AF=0.288;AN=52;BaseQRankSum=3.987;DP=759;FS=6.587;HRun=0;HaplotypeScore=111.4369;InbreedingCoeff=-0.0401;MQ=63.15;MQ0=9;MQRankSum=1.428;QD=3.70;ReadPosRankSum=1.973;VQSLOD=2.0340;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:53:68.10:0,68,520	0/0:6,0:6:12.04:0,12,182	./.	./.	0/0:31,0:31:47.07:0,47,674	0/1:19,3:23:66.96:67,0,448	0/0:23,0:23:30.04:0,30,389	0/0:37,0:37:24.16:0,24,202	0/0:32,0:30:47.84:0,48,374	0/0:33,0:33:17.49:0,17,600	0/0:19,0:19:14.09:0,14,347	0/1:18,2:20:36.27:36,0,499	0/1:23,2:25:19.14:19,0,567	0/0:18,1:19:2.46:0,2,463	0/1:24,4:28:82.06:82,0,539	0/1:29,3:32:40.73:41,0,699	0/0:27,0:27:26.94:0,27,218	0/0:21,0:21:9.94:0,10,437	0/1:14,1:15:11.83:12,0,223	0/1:26,1:26:25.57:26,0,438	0/0:47,0:47:83.19:0,83,1058	0/0:23,0:24:25.02:0,25,514	0/1:12,1:13:25.91:26,0,207	0/1:30,4:34:2.56:3,0,755	0/1:18,3:21:58.80:59,0,426	0/1:16,14:32:32.97:317,0,33	1/1:13,16:32:47.63:479,48,0	1/1:18,7:24:18.05:202,18,0
chr10	1039439	.	C	CAT	2719.36	PASS	AB=0.787;AC=6;AF=0.107;AN=56;BaseQRankSum=-4.475;DP=760;FS=0.909;HRun=0;HaplotypeScore=113.9774;InbreedingCoeff=0.6222;MQ=54.29;MQ0=17;MQRankSum=-1.174;QD=17.54;ReadPosRankSum=2.393;VQSLOD=3.9930;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:16,37:53:38.37:1194,38,0	0/0:6,0:6:17.25:0,17,214	0/0:28,0:9:20:0,20,216	0/0:28,0:9:6.57:0,7,199	0/0:33,0:33:82.63:0,83,985	0/0:25,0:25:74.83:0,75,801	0/0:22,0:22:51.92:0,52,567	0/1:47,0:47:99:467,0,284	1/1:1,25:24:48.14:909,48,0	0/0:30,0:29:67.40:0,67,886	0/0:17,0:17:42.05:0,42,512	0/0:22,0:22:60.03:0,60,720	0/0:21,0:21:63.06:0,63,780	0/0:17,0:17:51.05:0,51,623	0/0:28,0:28:68.90:0,69,830	0/0:31,0:31:83.76:0,84,1001	0/1:7,0:27:9.76:286,0,10	0/0:23,0:23:59.82:0,60,647	0/0:23,0:22:62.79:0,63,610	0/0:23,0:22:59.91:0,60,668	0/0:53,0:52:99:0,129,1503	0/0:23,0:23:60.05:0,60,718	0/0:17,0:17:44.83:0,45,460	0/0:32,0:32:80.81:0,81,989	0/0:23,0:23:42.58:0,43,655	0/0:28,0:28:77.69:0,78,609	0/0:32,0:32:74.61:0,75,569	0/0:20,0:19:44.85:0,45,348
chr10	1039777	.	AT	A	796.57	PASS	AB=0.914;AC=14;AF=0.250;AN=56;BaseQRankSum=11.760;DP=576;FS=0.000;HRun=13;HaplotypeScore=77.5440;InbreedingCoeff=0.4634;MQ=71.08;MQ0=0;MQRankSum=-1.270;QD=4.04;ReadPosRankSum=1.596;VQSLOD=0.9938;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,0:32:42.59:125,43,0	0/0:10,0:10:27.03:0,27,256	0/0:18,0:18:6.26:0,6,106	0/1:11,0:9:10.10:10,0,41	0/0:30,0:30:66.09:0,66,632	0/0:19,4:23:10.28:0,10,423	0/1:12,2:14:4.78:5,0,271	1/1:3,13:17:37.80:269,38,0	1/1:2,20:22:56.67:415,57,0	0/0:26,0:27:53.76:0,54,494	0/1:17,2:19:0.88:1,0,305	0/0:20,0:20:39.03:0,39,368	0/0:18,0:18:42.07:0,42,407	0/0:18,0:18:45.04:0,45,423	0/0:23,1:25:38.01:0,38,513	0/0:17,1:19:29.01:0,29,429	1/1:5,0:25:38.69:113,39,0	0/1:12,2:14:10.46:10,0,254	0/1:21,2:23:11.45:11,0,379	0/0:21,0:25:29.30:0,29,406	0/0:14,0:14:36.04:0,36,344	0/0:20,1:21:29.17:0,29,445	0/0:19,2:21:7.16:0,7,381	0/0:14,0:13:8.28:0,8,222	0/0:24,1:26:46.33:0,46,557	0/0:29,1:30:44.19:0,44,591	0/1:18,2:20:7.82:8,0,235	0/0:16,1:18:26.15:0,26,405
chr10	1041350	.	A	AT	1220.62	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-8.199;DP=555;FS=3.015;HRun=8;HaplotypeScore=50.5091;InbreedingCoeff=0.9533;MQ=71.35;MQ0=0;MQRankSum=-0.435;QD=27.12;ReadPosRankSum=1.969;VQSLOD=4.3967;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,43:45:99:1315,114,0	0/0:6,0:6:15:0,15,135	0/0:16,0:16:32.75:0,33,264	0/0:7,0:6:11.98:0,12,103	0/0:26,0:26:63.01:0,63,572	0/0:17,0:17:48.03:0,48,439	0/0:19,0:19:54:0,54,485	0/0:25,0:25:62.99:0,63,565	0/0:19,0:19:48:0,48,431	0/0:27,0:27:72.03:0,72,659	0/0:19,0:19:54.03:0,54,494	0/0:16,0:16:42.01:0,42,384	0/0:14,0:14:36:0,36,326	0/0:22,0:22:60:0,60,540	0/0:17,0:17:48:0,48,433	0/0:15,0:15:36:0,36,324	0/0:37,0:37:99:0,99,893	0/0:17,0:17:42.01:0,42,384	0/0:19,0:19:54:0,54,487	0/0:18,0:18:51.01:0,51,463	0/0:18,0:18:51.01:0,51,462	0/0:11,0:11:33.02:0,33,302	0/0:16,0:16:38.99:0,39,350	0/0:37,0:37:99:0,102,912	0/0:25,0:25:69.03:0,69,632	0/0:22,0:22:63.03:0,63,577	0/0:13,0:13:39.01:0,39,352	0/0:12,0:12:27.01:0,27,247
chr10	1042335	.	TA	T	716.14	PASS	AB=0.881;AC=8;AF=0.143;AN=56;BaseQRankSum=8.113;DP=586;FS=7.852;HRun=13;HaplotypeScore=65.9969;InbreedingCoeff=0.7051;MQ=68.40;MQ0=0;MQRankSum=2.794;QD=6.76;ReadPosRankSum=2.264;VQSLOD=2.1014;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,23:29:33.74:375,34,0	0/0:21,0:21:45.06:0,45,432	0/1:19,1:15:9.64:10,0,72	0/0:12,0:10:8.64:0,9,32	0/0:27,0:27:47.04:0,47,424	0/0:24,0:24:60:0,60,559	0/0:16,0:16:33.02:0,33,306	0/0:29,0:29:39.39:0,39,525	1/1:4,1:19:27.41:92,27,0	0/0:23,0:23:51.02:0,51,476	0/0:26,1:27:29.02:0,29,408	0/0:19,0:19:38.95:0,39,349	0/0:16,0:17:29.88:0,30,277	0/0:18,1:19:23.17:0,23,381	0/0:24,1:25:41.06:0,41,525	0/0:17,0:19:51.90:0,52,441	1/1:4,17:21:50.66:372,51,0	0/0:10,0:10:27.01:0,27,253	0/0:20,0:20:44.78:0,45,412	0/0:17,0:17:30.84:0,31,265	0/0:16,0:16:45.06:0,45,433	0/0:23,0:26:31.31:0,31,391	0/0:22,0:22:53.69:0,54,487	0/1:13,4:17:20.22:20,0,297	0/0:21,0:26:65.68:0,66,585	0/0:21,0:21:33.04:0,33,315	0/0:28,1:29:35.05:0,35,470	0/0:15,0:15:41.98:0,42,377
chr10	1042995	.	T	TCTTC	2768.06	PASS	AB=1.000;AC=13;AF=0.250;AN=52;BaseQRankSum=-2.066;DP=412;FS=4.741;HRun=0;HaplotypeScore=207.1553;InbreedingCoeff=0.8527;MQ=41.09;MQ0=4;MQRankSum=-5.413;QD=27.96;ReadPosRankSum=-1.277;VQSLOD=3.2497;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:9:5.94:0,6,46	0/0:9,0:9:14.96:0,15,179	./.	./.	0/0:24,0:23:35.86:0,36,421	1/1:10,7:17:33.07:652,33,0	1/1:13,0:12:14.86:146,15,0	0/0:19,0:15:14.91:0,15,133	1/1:13,0:13:26.83:444,27,0	0/0:22,0:22:51.05:0,51,673	0/0:17,0:17:35.97:0,36,471	0/0:17,0:17:27.02:0,27,356	0/0:12,0:12:14.97:0,15,173	0/0:23,0:23:32.93:0,33,400	1/1:11,5:15:30.06:572,30,0	1/1:7,4:11:17.95:317,18,0	0/1:12,0:10:38.30:210,0,38	0/0:10,0:10:17.89:0,18,168	0/0:14,0:14:13.29:0,13,209	0/0:16,0:16:30.10:0,30,437	0/0:13,0:13:20.68:0,21,233	0/0:10,0:10:21:0,21,256	0/0:12,0:12:20.98:0,21,270	0/0:15,0:13:20.76:0,21,235	1/1:9,8:17:27.09:610,27,0	0/0:25,0:25:50.96:0,51,657	0/0:13,0:13:18.06:0,18,268	0/0:16,0:16:30.06:0,30,415
chr10	1043052	.	CTCTT	C	924.09	PASS	AB=0.774;AC=9;AF=0.180;AN=50;BaseQRankSum=4.474;DP=548;FS=11.610;HRun=0;HaplotypeScore=120.4551;InbreedingCoeff=0.6556;MQ=49.71;MQ0=15;MQRankSum=0.029;QD=10.38;ReadPosRankSum=2.748;VQSLOD=2.3309;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:8:5.81:0,6,51	1/1:3,5:8:15.05:218,15,0	./.	./.	0/0:26,0:26:42.14:0,42,923	0/0:19,0:20:24.07:0,24,473	0/0:13,0:12:6.02:0,6,138	./.	0/0:12,0:10:2.84:0,3,14	0/0:29,0:29:39.13:0,39,832	0/0:21,0:21:33.11:0,33,756	0/0:9,0:13:6.02:0,6,104	0/0:9,0:10:15.05:0,15,291	0/0:22,0:22:24.08:0,24,525	1/1:9,4:12:12.04:174,12,0	0/0:12,0:12:15.05:0,15,342	0/0:10,0:9:2.99:0,3,23	0/0:15,0:15:30.10:0,30,662	1/1:18,4:20:15.05:226,15,0	0/0:36,0:36:51.17:0,51,1108	0/0:13,0:13:9.03:0,9,195	0/0:13,0:13:18.06:0,18,404	0/0:10,0:13:14.96:0,15,219	0/0:16,0:15:4.73:0,5,42	0/0:31,0:31:42.14:0,42,964	0/1:17,7:24:99:248,0,115	0/0:17,0:17:27.09:0,27,606	1/1:19,3:22:18.02:209,18,0
chr10	1043080	.	T	TCCC	221.48	PASS	AB=0.858;AC=3;AF=0.056;AN=54;BaseQRankSum=3.069;DP=442;FS=1.572;HRun=0;HaplotypeScore=72.2927;InbreedingCoeff=-0.0624;MQ=51.13;MQ0=8;MQRankSum=-3.477;QD=5.68;ReadPosRankSum=-2.885;VQSLOD=1.5365;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:8,1:8:54.85:55,0,258	0/0:10,0:10:30.08:0,30,392	0/0:7,0:3:8.61:0,9,83	./.	0/0:24,0:24:72.25:0,72,1325	0/0:17,0:16:37.98:0,38,621	0/0:11,0:11:33.04:0,33,576	0/1:22,2:12:99:137,0,276	0/1:4,2:4:98.56:129,0,99	0/0:29,0:29:87.30:0,87,1621	0/0:24,0:24:72.25:0,72,1332	0/0:7,0:7:15.03:0,15,219	0/0:9,0:9:25.93:0,26,367	0/0:16,0:16:39.13:0,39,726	0/0:12,0:11:33.10:0,33,519	0/0:9,0:9:27.09:0,27,502	0/0:11,0:8:20.24:0,20,304	0/0:17,0:17:51.13:0,51,898	0/0:13,0:10:27.08:0,27,375	0/0:36,0:36:99:0,99,1846	0/0:11,0:11:30.10:0,30,558	0/0:12,0:12:33.11:0,33,615	0/0:14,0:14:38.91:0,39,570	0/0:14,0:12:27.09:0,27,492	0/0:30,0:30:78.27:0,78,1454	0/0:21,0:21:63.19:0,63,973	0/0:18,0:18:51.13:0,51,909	0/0:22,0:21:51.17:0,51,855
chr10	1043086	.	CT	C	54.69	PASS	AB=0.750;AC=2;AF=0.037;AN=54;BaseQRankSum=3.117;DP=427;FS=4.512;HRun=3;HaplotypeScore=53.4457;InbreedingCoeff=-0.0415;MQ=51.93;MQ0=7;MQRankSum=-2.614;QD=3.65;ReadPosRankSum=-2.336;VQSLOD=-0.6471;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:5,5:9:99:116,0,177	0/0:12,0:12:28.68:0,29,270	0/0:5,0:3:3.44:0,3,21	./.	0/0:23,0:23:66.22:0,66,934	0/0:15,0:14:36.10:0,36,478	0/0:11,0:11:27.05:0,27,352	0/0:21,0:11:33.11:0,33,443	0/1:4,1:3:26.90:27,0,72	0/0:30,0:30:87.28:0,87,1209	0/0:24,0:24:72.24:0,72,1011	0/0:8,0:8:18.03:0,18,203	0/0:8,0:8:24.04:0,24,287	0/0:15,0:15:36.12:0,36,512	0/0:11,0:11:27.39:0,27,293	0/0:12,0:12:36.09:0,36,485	0/0:12,0:9:23.89:0,24,230	0/0:16,0:16:48.13:0,48,660	0/0:11,0:10:18.27:0,18,179	0/0:36,0:36:96.31:0,96,1339	0/0:11,0:11:27.09:0,27,381	0/0:12,0:12:36.12:0,36,503	0/0:13,0:13:36.08:0,36,438	0/0:13,0:12:30.06:0,30,398	0/0:30,0:30:87.29:0,87,1224	0/0:19,0:19:46.61:0,47,562	0/0:18,0:18:51.17:0,51,719	0/0:21,0:20:42.81:0,43,493
chr10	1043543	.	AG	A	1883.39	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=9.182;DP=743;FS=2.417;HRun=3;HaplotypeScore=68.5882;InbreedingCoeff=0.9994;MQ=76.79;MQ0=1;MQRankSum=-1.644;QD=33.63;ReadPosRankSum=2.301;VQSLOD=4.3849;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,132,1828	0/0:10,0:10:30.10:0,30,432	0/0:39,0:37:99:0,105,1446	0/0:24,0:25:63.20:0,63,880	0/0:28,0:28:84.28:0,84,1207	0/0:22,0:22:60.20:0,60,859	0/0:33,0:33:93.31:0,93,1336	0/0:26,0:26:72.24:0,72,1036	0/0:23,0:23:69.23:0,69,993	0/0:23,0:23:69.23:0,69,979	0/0:21,0:21:63.19:0,63,872	0/0:17,0:17:51.15:0,51,701	0/0:14,0:14:42.13:0,42,584	0/0:27,0:27:81.27:0,81,1165	0/0:19,0:19:57.19:0,57,820	0/0:20,0:20:60.20:0,60,864	1/1:2,54:56:99:1978,162,0	0/0:30,0:30:87.29:0,87,1253	0/0:21,0:21:60.18:0,60,840	0/0:17,0:17:45.15:0,45,647	0/0:41,0:41:99:0,120,1726	0/0:21,0:21:63.21:0,63,905	0/0:28,0:28:78.26:0,78,1121	0/0:37,0:37:99:0,108,1554	0/0:21,0:21:57.17:0,57,800	0/0:38,0:38:99:0,111,1561	0/0:26,0:26:75.25:0,75,1079	0/0:15,0:15:45.15:0,45,646
chr10	1046013	.	TCA	T	1616.47	PASS	AB=0.934;AC=6;AF=0.107;AN=56;BaseQRankSum=8.841;DP=866;FS=1.088;HRun=0;HaplotypeScore=110.4221;InbreedingCoeff=0.6977;MQ=62.96;MQ0=5;MQRankSum=0.117;QD=15.39;ReadPosRankSum=-1.485;VQSLOD=2.8648;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,30:36:66.12:926,66,0	0/0:10,0:10:21.07:0,21,343	0/0:56,0:41:75.18:0,75,1106	0/0:52,0:39:66.08:0,66,934	0/0:33,0:33:84.29:0,84,1383	0/0:28,0:28:69.24:0,69,1131	0/0:20,0:20:51.17:0,51,835	1/1:5,21:27:69:809,69,0	0/0:20,0:20:54.15:0,54,832	0/0:30,0:30:78.25:0,78,1238	0/0:12,0:12:30.10:0,30,495	0/0:38,0:38:99:0,111,1818	0/0:32,0:32:78.25:0,78,1256	0/0:25,0:25:54.18:0,54,877	0/0:29,0:29:69.23:0,69,1126	0/0:34,0:34:90.31:0,90,1474	0/0:31,2:33:43.70:0,44,1217	0/1:23,2:25:6.07:6,0,878	0/1:15,1:16:1.42:1,0,509	0/0:35,0:35:81.28:0,81,1327	0/0:78,0:78:99:0,199,3247	0/0:29,0:29:69.22:0,69,1111	0/0:30,0:30:81.26:0,81,1312	0/0:23,0:23:45.15:0,45,737	0/0:17,0:17:48.16:0,48,785	0/0:31,0:31:81.27:0,81,1308	0/0:31,2:33:9.20:0,9,1186	0/0:33,0:33:96.33:0,96,1576
chr10	1048873	.	GATATATAT	G	1275.93	PASS	AB=1.000;AC=15;AF=0.500;AN=30;BaseQRankSum=5.180;DP=189;FS=1.190;HRun=0;HaplotypeScore=54.1336;InbreedingCoeff=0.5346;MQ=76.14;MQ0=6;MQRankSum=-4.909;QD=12.51;ReadPosRankSum=-0.380;VQSLOD=1.4635;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:12,0:17:6.02:112,6,0	0/0:4,0:4:3.01:0,3,111	./.	0/1:16,0:5:0:0,0,0	0/0:2,0:2:3.01:0,3,125	0/0:4,0:4:0.89:0,1,2	./.	1/1:30,0:29:42.03:579,42,0	1/1:2,0:3:2.90:16,3,0	./.	./.	./.	./.	./.	0/0:2,0:2:3.01:0,3,38	./.	1/1:19,0:19:30.10:385,30,0	0/0:15,0:16:28.89:0,29,849	./.	./.	./.	./.	./.	0/0:2,0:2:3.01:0,3,124	0/0:7,0:7:6.02:0,6,217	1/1:2,0:2:1.82:5,2,0	1/1:3,3:6:3.01:77,3,0	1/1:3,4:9:10.99:217,11,0
chr10	1048889	.	TATATATA	T	2761.65	PASS	AB=1.000;AC=9;AF=0.225;AN=40;BaseQRankSum=3.799;DP=166;FS=2.946;HRun=0;HaplotypeScore=45.4560;InbreedingCoeff=0.2400;MQ=54.25;MQ0=10;MQRankSum=-3.543;QD=34.52;ReadPosRankSum=2.243;VQSLOD=3.2228;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:7,0:7:29.12:78,0,29	0/0:3,0:3:9.03:0,9,239	./.	0/0:36,0:6:9.48:0,9,85	0/0:2,0:2:6.02:0,6,215	0/0:2,0:1:1.25:0,1,3	0/0:1,0:1:3.01:0,3,38	1/1:4,30:32:48.33:1830,48,0	0/1:2,0:2:8.68:9,0,32	0/0:2,0:2:6.02:0,6,135	./.	./.	./.	0/0:2,0:2:6.02:0,6,76	0/0:1,0:1:3.01:0,3,70	./.	1/1:0,22:22:30.10:834,30,0	0/0:14,0:13:33.10:0,33,972	./.	0/0:1,0:1:3.01:0,3,38	./.	0/0:1,0:1:3:0,3,25	./.	0/0:1,0:1:3.01:0,3,125	0/0:7,0:7:15.52:0,16,364	0/0:1,0:1:2.60:0,3,10	0/1:6,0:6:28.98:29,0,77	1/1:8,0:8:1.76:108,2,0
chr10	1049153	.	GCC	G	2536.04	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=6.087;DP=459;FS=29.901;HRun=9;HaplotypeScore=75.2759;InbreedingCoeff=0.9140;MQ=72.96;MQ0=1;MQRankSum=0.158;QD=26.42;ReadPosRankSum=-2.378;VQSLOD=0.9542;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,27:27:72.21:839,72,0	0/0:2,0:2:6.01:0,6,76	0/0:22,0:21:31.58:0,32,403	0/0:16,0:14:6.85:0,7,275	0/0:17,0:17:48.15:0,48,764	0/0:28,0:28:81.27:0,81,1300	0/0:17,0:18:48.14:0,48,740	1/1:7,32:40:76.07:1091,76,0	0/0:1,0:9:21.04:0,21,220	0/0:13,0:13:33.09:0,33,495	0/0:6,0:6:15.03:0,15,200	0/0:17,0:17:51.16:0,51,812	0/0:20,0:20:57.18:0,57,889	0/0:11,0:11:30.08:0,30,443	0/0:18,0:18:42.14:0,42,689	0/0:13,0:13:33.11:0,33,542	1/1:3,25:28:48.40:748,48,0	0/0:19,0:21:56.68:0,57,895	0/0:19,0:19:48.16:0,48,788	0/0:12,0:12:33.10:0,33,517	0/0:26,0:27:68.72:0,69,1088	0/0:5,0:5:15.05:0,15,244	0/0:7,0:7:18.06:0,18,295	0/0:22,0:22:54.17:0,54,862	0/0:10,0:10:30.09:0,30,470	0/0:1,0:13:33.20:0,33,169	0/0:1,0:10:25.47:0,25,128	0/0:0,0:6:14.97:0,15,53
chr10	1049155	.	C	CA	92.02	PASS	AB=0.867;AC=6;AF=0.107;AN=56;BaseQRankSum=5.564;DP=455;FS=20.569;HRun=0;HaplotypeScore=74.2321;InbreedingCoeff=-0.0815;MQ=73.13;MQ0=1;MQRankSum=-3.547;QD=1.64;ReadPosRankSum=0.350;VQSLOD=0.1030;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:27:72.66:0,73,412	0/1:1,1:2:32.88:33,0,36	0/0:23,0:21:16.32:0,16,415	0/1:15,0:14:46.72:47,0,277	0/0:16,1:17:9.06:0,9,585	0/0:27,0:27:81.23:0,81,1064	0/0:18,0:18:45.38:0,45,632	0/0:39,1:40:75.13:0,75,641	0/1:9,0:9:9.11:24,0,9	0/1:11,2:13:40.97:41,0,368	0/1:4,2:6:62.13:62,0,110	0/0:18,0:18:54.15:0,54,707	0/0:19,0:19:51.61:0,52,693	0/0:10,0:10:30.07:0,30,368	0/0:17,0:17:51.14:0,51,664	0/0:12,0:12:36.11:0,36,485	0/0:28,0:28:72.60:0,73,418	0/0:22,0:22:57.12:0,57,771	0/0:18,0:18:54.15:0,54,714	0/1:10,1:11:5.63:6,0,378	0/0:27,0:27:81.11:0,81,1016	0/0:5,0:5:15.05:0,15,200	0/0:8,0:8:24.05:0,24,298	0/0:20,0:20:57.17:0,57,763	0/0:10,0:10:29.89:0,30,389	0/0:14,0:14:38.38:0,38,267	0/0:12,0:12:29.49:0,29,207	0/0:6,0:6:17.67:0,18,111
chr10	1049304	.	T	TA	841.77	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=3.656;DP=574;FS=7.959;HRun=6;HaplotypeScore=77.2731;InbreedingCoeff=0.9391;MQ=79.34;MQ0=0;MQRankSum=-4.356;QD=15.88;ReadPosRankSum=-3.169;VQSLOD=2.6006;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,16:14:26.95:286,27,0	0/0:9,0:9:27.05:0,27,270	0/0:36,0:33:62.02:0,62,578	0/0:15,0:13:3.01:0,3,83	0/0:40,0:40:99:0,111,1132	0/0:25,0:25:69.12:0,69,688	0/0:24,0:24:62.71:0,63,599	1/1:5,10:13:26.92:316,27,0	0/0:22,0:22:48.73:0,49,585	0/0:21,0:21:53.33:0,53,527	0/0:20,0:20:51.11:0,51,520	0/0:20,0:20:60.10:0,60,598	0/0:25,0:25:54.06:0,54,534	0/0:14,0:14:42.10:0,42,428	0/0:18,0:18:45.08:0,45,452	0/0:15,0:15:45.04:0,45,446	1/1:1,20:20:35.88:382,36,0	0/0:14,0:14:39.09:0,39,398	0/0:30,0:29:28.66:0,29,599	0/0:22,0:22:60.12:0,60,606	0/0:14,0:14:39.06:0,39,384	0/0:20,0:20:57.02:0,57,549	0/0:19,0:19:42.09:0,42,428	0/0:29,0:29:84.15:0,84,845	0/0:11,0:11:33.08:0,33,337	0/0:14,0:14:39.08:0,39,393	0/0:24,0:24:46.19:0,46,533	0/0:20,0:20:60.14:0,60,611
chr10	1049311	.	T	TTGTGTG	1394.83	PASS	AB=1.000;AC=8;AF=0.143;AN=56;BaseQRankSum=6.230;DP=593;FS=0.000;HRun=0;HaplotypeScore=146.7414;InbreedingCoeff=0.6781;MQ=67.33;MQ0=0;MQRankSum=-7.573;QD=11.72;ReadPosRankSum=-3.465;VQSLOD=1.9910;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:14,6:17:24.08:717,24,0	0/0:10,0:10:21.07:0,21,439	0/0:31,0:25:14.14:0,14,290	0/0:15,0:11:5.66:0,6,115	0/0:39,0:38:72.25:0,72,1507	0/0:23,0:24:42.14:0,42,828	0/1:28,0:28:8.08:8,0,1132	1/1:18,0:14:15.05:372,15,0	0/0:25,0:25:51.17:0,51,1038	0/0:20,0:20:39.13:0,39,784	0/0:22,0:23:48.16:0,48,983	0/0:22,0:22:54.18:0,54,1117	0/0:22,0:23:42.14:0,42,865	0/0:16,0:16:36.12:0,36,742	0/0:15,0:15:39.13:0,39,814	0/0:16,0:16:27.09:0,27,562	1/1:19,4:22:18:410,18,0	0/0:15,0:15:27.05:0,27,506	0/1:30,0:29:36.21:36,0,535	0/0:26,0:27:52.04:0,52,997	0/0:16,0:16:33.11:0,33,688	0/0:21,0:21:45.15:0,45,909	0/0:20,0:20:42.12:0,42,799	0/0:28,0:30:72.20:0,72,1406	0/0:11,0:11:12.04:0,12,251	0/0:15,0:15:28.59:0,29,624	0/0:20,0:20:33.11:0,33,691	0/0:19,0:20:33.11:0,33,645
chr10	1049347	.	GA	G	639.17	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=3.920;DP=542;FS=19.259;HRun=1;HaplotypeScore=89.5901;InbreedingCoeff=0.9834;MQ=58.71;MQ0=8;MQRankSum=-6.514;QD=18.80;ReadPosRankSum=-2.775;VQSLOD=2.1451;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,17:17:32.89:364,33,0	0/0:8,0:8:24.03:0,24,292	0/0:32,0:8:15.06:0,15,165	0/0:29,0:16:37.30:0,37,456	0/0:27,0:27:77.83:0,78,961	0/0:14,0:14:39.11:0,39,536	0/0:28,0:28:57.99:0,58,1055	1/1:3,10:12:31.91:396,32,0	0/0:21,0:21:63.16:0,63,843	0/0:21,0:21:60.08:0,60,744	0/0:23,0:23:69.07:0,69,829	0/0:21,0:21:63.11:0,63,805	0/0:22,0:22:41.66:0,42,642	0/0:19,0:19:53.55:0,54,607	0/0:18,0:18:54.14:0,54,716	0/0:14,0:14:39.07:0,39,494	0/0:8,0:8:16.60:0,17,77	0/0:9,0:9:26.98:0,27,359	0/0:20,0:19:57.13:0,57,728	0/0:25,0:25:68.80:0,69,875	0/0:18,0:17:51.11:0,51,701	0/0:26,0:26:74.93:0,75,967	0/0:20,0:20:56.82:0,57,745	0/0:25,0:24:66.15:0,66,896	0/0:10,0:10:30.06:0,30,400	0/0:21,0:21:54.17:0,54,591	0/0:19,0:18:44.16:0,44,510	0/0:9,0:9:26.92:0,27,306
chr10	1049357	.	A	AGAG	1133.61	PASS	AB=0.994;AC=12;AF=0.214;AN=56;BaseQRankSum=3.286;DP=496;FS=5.232;HRun=0;HaplotypeScore=110.4798;InbreedingCoeff=0.3761;MQ=59.82;MQ0=4;MQRankSum=-1.978;QD=7.56;ReadPosRankSum=-2.515;VQSLOD=1.9057;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:20,0:16:34.75:35,0,54	0/0:6,0:6:5.99:0,6,52	0/0:29,0:8:8.95:0,9,80	0/1:28,0:16:5.64:6,0,77	0/0:22,0:22:13.97:0,14,274	0/0:13,0:13:30:0,30,260	0/0:29,0:29:55.94:0,56,466	0/0:14,0:13:13.71:0,14,65	0/0:22,0:22:54.03:0,54,518	0/0:18,0:18:35.82:0,36,287	0/0:20,0:20:38.90:0,39,329	0/0:21,0:21:47.91:0,48,404	0/1:16,0:16:0:0,0,291	0/0:13,0:13:29.98:0,30,254	0/1:18,0:18:6.02:6,0,286	0/0:13,0:13:25.19:0,25,222	0/1:9,0:9:5.14:5,0,62	0/0:6,0:6:15:0,15,133	0/1:18,0:17:32.07:32,0,92	0/0:18,0:18:38.92:0,39,323	0/0:22,0:21:35.98:0,36,316	0/0:25,0:25:47.78:0,48,408	0/0:16,0:16:35.92:0,36,300	0/0:25,0:25:56.98:0,57,508	0/0:12,0:12:26.90:0,27,226	1/1:2,12:14:36.12:662,36,0	1/1:7,10:17:8.08:391,8,0	1/1:5,3:8:9.03:147,9,0
chr10	1054659	.	A	AGCGCGCGCGCGC	106.45	PASS	AB=0.642;AC=3;AF=0.056;AN=54;BaseQRankSum=2.461;DP=651;FS=12.297;HRun=0;HaplotypeScore=220.4990;InbreedingCoeff=0.6826;MQ=66.01;MQ0=9;MQRankSum=-1.673;QD=2.13;ReadPosRankSum=-4.370;VQSLOD=0.7106;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:15,13:34:0:0,0,0	0/0:12,0:12:20.55:0,21,562	./.	0/0:12,0:7:3.01:0,3,98	0/0:18,0:18:33.10:0,33,1060	0/0:25,0:25:60.19:0,60,2007	0/0:33,0:32:78.24:0,78,2368	1/1:16,0:16:12.01:192,12,0	0/0:36,0:36:81.22:0,81,2435	0/0:25,0:25:54.17:0,54,1822	0/0:7,0:7:12.04:0,12,379	0/0:28,0:28:69.19:0,69,2181	0/0:21,0:21:48.15:0,48,1518	0/0:32,0:32:87.30:0,87,2905	0/0:29,0:29:66.16:0,66,2176	0/0:24,0:24:56.92:0,57,1872	0/0:19,0:27:64.29:0,64,1066	0/0:22,0:22:60.18:0,60,1992	0/0:17,0:17:36.94:0,37,1228	0/0:10,0:10:27.08:0,27,814	0/0:68,0:66:99:0,150,5044	0/0:18,0:18:36.12:0,36,1230	0/0:12,0:12:36.12:0,36,1269	0/0:40,0:41:90.26:0,90,2874	0/0:23,0:24:66.23:0,66,2300	0/0:20,0:20:12.86:0,13,1333	0/0:21,0:21:31.94:0,32,897	0/0:5,0:5:6.02:0,6,163
chr10	1054824	.	AAACAGCATAGGCTGACT	A	330.42	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.171;DP=813;FS=4.510;HRun=0;HaplotypeScore=349.2797;InbreedingCoeff=0.9377;MQ=88.78;MQ0=0;MQRankSum=-1.693;QD=17.39;ReadPosRankSum=0.617;VQSLOD=1.3906;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,99,6377	0/0:16,0:16:39.11:0,39,2444	0/0:34,0:34:38.21:0,38,1504	0/0:25,0:25:39.04:0,39,1556	0/0:13,0:13:39.10:0,39,1854	0/0:29,0:29:69.24:0,69,4814	0/0:32,0:32:81.22:0,81,4863	0/0:37,0:37:84.22:0,84,4267	0/0:46,0:46:99:0,108,7286	0/0:34,0:34:84.26:0,84,5493	0/0:20,0:20:44.85:0,45,2231	0/0:35,0:35:87.30:0,87,6889	0/0:28,0:28:63.19:0,63,4458	0/0:43,0:43:90.29:0,90,6119	0/0:37,0:37:99:0,102,7156	0/0:35,0:35:78.23:0,78,5003	1/1:2,17:19:9.03:414,9,0	0/0:11,0:11:27.08:0,27,1649	0/0:24,0:24:45.14:0,45,1982	0/0:26,0:26:57.17:0,57,3909	0/0:46,0:46:99:0,120,6860	0/0:20,0:20:48.13:0,48,3107	0/0:19,0:19:48.15:0,48,3190	0/0:34,0:34:78.25:0,78,5847	0/0:26,0:26:66.15:0,66,3774	0/0:31,0:31:84.26:0,84,5113	0/0:35,0:35:84.18:0,84,4621	0/0:17,0:17:36.12:0,36,2698
chr10	1056208	.	TA	T	2046.41	PASS	AB=0.934;AC=15;AF=0.268;AN=56;BaseQRankSum=8.190;DP=553;FS=3.482;HRun=11;HaplotypeScore=60.7537;InbreedingCoeff=0.6548;MQ=72.20;MQ0=1;MQRankSum=1.679;QD=11.12;ReadPosRankSum=0.894;VQSLOD=3.1562;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,17:22:49.96:400,50,0	0/0:10,0:10:21.04:0,21,218	0/0:13,0:12:16.10:0,16,163	0/1:16,1:14:17.79:18,0,82	0/0:27,1:28:26.80:0,27,605	0/0:22,3:26:22.71:0,23,629	0/0:11,0:12:29.91:0,30,302	1/1:10,19:30:56.44:435,56,0	1/1:5,16:21:12.96:313,13,0	0/0:13,1:15:14.28:0,14,336	0/0:27,0:28:71.99:0,72,736	0/1:18,2:20:22.55:23,0,390	0/0:18,2:21:23.71:0,24,441	0/0:16,2:18:17.44:0,17,380	0/0:20,1:20:29.49:0,29,519	0/0:28,1:29:44.34:0,44,652	0/0:19,2:22:7.66:0,8,466	0/0:24,0:23:57.06:0,57,578	0/0:12,1:20:22.33:0,22,324	0/0:21,0:22:63.02:0,63,648	0/0:12,0:13:32.94:0,33,327	0/0:13,0:16:41.73:0,42,399	0/0:19,2:21:4.85:0,5,462	0/0:9,0:10:20.87:0,21,198	0/1:15,1:18:10.52:11,0,278	1/1:2,7:9:20.97:172,21,0	1/1:5,29:34:77.86:640,78,0	1/1:1,11:13:3.01:220,3,0
chr10	1056492	.	T	TC	1163.91	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-7.889;DP=644;FS=10.791;HRun=1;HaplotypeScore=60.9033;InbreedingCoeff=0.9985;MQ=77.80;MQ0=0;MQRankSum=-2.710;QD=36.37;ReadPosRankSum=0.783;VQSLOD=3.1124;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:84.27:0,84,1089	0/0:9,0:9:27.09:0,27,349	0/0:15,0:15:45.13:0,45,540	0/0:15,0:15:41.60:0,42,477	0/0:22,0:22:60.19:0,60,778	0/0:27,0:27:81.24:0,81,1024	0/0:32,0:32:93.29:0,93,1193	0/0:29,0:29:84.26:0,84,1068	0/0:35,0:35:99:0,105,1357	0/0:21,0:21:63.19:0,63,798	0/0:17,0:17:48.16:0,48,620	0/0:34,0:34:99:0,99,1273	0/0:20,0:20:57.19:0,57,739	0/0:25,0:25:75.23:0,75,960	0/0:34,0:34:96.31:0,96,1246	0/0:14,0:14:39.12:0,39,494	1/1:1,31:32:84.28:1259,84,0	0/0:13,0:13:39.13:0,39,506	0/0:17,0:17:48.16:0,48,623	0/0:26,0:26:72.23:0,72,934	0/0:40,0:40:99:0,117,1459	0/0:12,0:12:36.12:0,36,467	0/0:22,0:22:66.21:0,66,856	0/0:26,0:26:63.19:0,63,802	0/0:28,0:28:84.27:0,84,1091	0/0:18,0:18:51.16:0,51,650	0/0:17,0:17:51.17:0,51,662	0/0:12,0:12:36.12:0,36,466
chr10	1056584	.	CTCTT	C	1475.23	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.238;DP=705;FS=2.663;HRun=0;HaplotypeScore=109.8937;InbreedingCoeff=0.9918;MQ=76.66;MQ0=0;MQRankSum=-2.710;QD=43.39;ReadPosRankSum=3.142;VQSLOD=3.9764;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,34:34:75.26:1570,75,0	0/0:6,0:6:18.06:0,18,522	0/0:32,0:32:95.27:0,95,2528	0/0:23,0:23:69.22:0,69,1723	0/0:25,0:25:72.23:0,72,1962	0/0:25,0:25:75.26:0,75,2082	0/0:25,0:25:72.25:0,72,1991	0/0:43,0:43:99:0,129,3460	0/0:27,0:27:81.28:0,81,2320	0/0:30,0:30:90.30:0,90,2490	0/0:17,0:17:51.18:0,51,1427	0/0:29,0:29:87.30:0,87,2515	0/0:24,0:24:72.25:0,72,2002	0/0:28,0:28:84.29:0,84,2299	0/0:33,0:33:99:0,99,2746	0/0:22,0:22:66.23:0,66,1871	0/0:34,0:34:96.30:0,96,2631	0/0:15,0:15:45.15:0,45,1202	0/0:15,0:15:45.15:0,45,1252	0/0:18,0:18:54.17:0,54,1497	0/0:44,0:44:99:0,129,3631	0/0:20,0:20:60.21:0,60,1734	0/0:20,0:20:60.20:0,60,1678	0/0:27,0:27:81.28:0,81,2277	0/0:11,0:11:33.11:0,33,954	0/0:31,0:31:93.32:0,93,2643	0/0:28,0:28:84.29:0,84,2423	0/0:19,0:19:57.20:0,57,1651
chr10	1057607	.	GCA	G	596.65	PASS	AB=0.888;AC=18;AF=0.360;AN=50;BaseQRankSum=5.828;DP=630;FS=3.983;HRun=0;HaplotypeScore=94.0454;InbreedingCoeff=-0.0531;MQ=60.72;MQ0=11;MQRankSum=-1.338;QD=1.66;ReadPosRankSum=0.104;VQSLOD=1.8356;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:15,0:37:0.03:0,0,0	0/1:6,2:8:20.61:21,0,98	./.	./.	0/0:15,0:14:27.09:0,27,395	0/1:11,6:17:86.33:86,0,111	0/1:41,2:43:78.54:79,0,315	./.	0/0:11,0:20:9.01:0,9,96	0/1:16,0:16:8.55:9,0,234	0/0:13,0:13:12.04:0,12,172	0/1:27,2:29:59.12:59,0,386	0/0:17,0:17:11.97:0,12,149	0/1:26,1:27:65.67:66,0,394	0/1:18,3:21:2.55:3,0,350	0/1:22,1:23:1.39:1,0,409	1/1:23,0:35:5.68:28,6,0	0/1:32,0:31:15.19:15,0,543	0/0:21,0:20:8.90:0,9,104	0/0:12,0:12:12.03:0,12,151	0/0:58,0:56:7.43:0,7,477	0/0:16,0:16:12.04:0,12,176	0/0:25,0:23:11.74:0,12,265	0/0:37,2:40:19.87:0,20,754	0/1:14,0:14:78.28:78,0,91	1/1:12,6:21:4.87:208,5,0	1/1:16,7:22:3.37:33,3,0	0/1:10,2:12:12.94:56,0,13
chr10	1059786	.	CTGTA	C	1855.81	PASS	AB=0.927;AC=12;AF=0.231;AN=52;BaseQRankSum=6.937;DP=532;FS=6.070;HRun=0;HaplotypeScore=93.4534;InbreedingCoeff=0.5745;MQ=61.45;MQ0=4;MQRankSum=0.778;QD=11.97;ReadPosRankSum=0.644;VQSLOD=2.0056;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:31.25:0,31,882	0/1:11,1:12:13.20:13,0,670	./.	./.	0/0:26,0:26:48.15:0,48,1079	0/1:12,1:13:25.24:25,0,398	0/1:10,2:12:31.26:31,0,266	0/1:27,0:25:0:0,0,0	1/1:7,18:25:42.14:648,42,0	1/1:7,12:19:36.12:556,36,0	1/1:14,7:22:21.06:306,21,0	0/0:15,0:15:36.12:0,36,838	0/0:20,1:20:36.12:0,36,839	0/0:15,0:15:39.13:0,39,908	0/0:23,0:24:42.13:0,42,896	0/0:18,0:18:33.11:0,33,740	1/1:12,13:25:7.13:437,7,0	0/0:25,2:27:4.84:0,5,972	0/0:23,0:23:12.04:0,12,281	0/0:20,0:20:30.10:0,30,682	0/0:12,0:12:30.10:0,30,703	0/0:7,0:7:21.07:0,21,489	0/0:17,0:17:39.13:0,39,889	0/0:3,0:3:6.02:0,6,141	0/0:27,0:27:48.15:0,48,1030	0/0:15,0:27:48.10:0,48,787	0/0:12,0:31:59.11:0,59,1016	0/0:5,0:8:15.05:0,15,295
chr10	1060617	.	T	TG	2674.05	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-8.046;DP=657;FS=3.657;HRun=1;HaplotypeScore=67.7681;InbreedingCoeff=0.9982;MQ=86.23;MQ0=0;MQRankSum=-1.521;QD=37.66;ReadPosRankSum=2.682;VQSLOD=4.3874;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,120,1518	0/0:8,0:8:24.08:0,24,312	0/0:24,0:24:69.18:0,69,840	0/0:21,0:21:57.12:0,57,677	0/0:23,0:23:66.07:0,66,817	0/0:17,0:17:51.17:0,51,659	0/0:19,0:19:57.17:0,57,724	0/0:32,0:32:90.28:0,90,1152	1/1:0,14:14:36.12:540,36,0	0/0:30,0:30:87.26:0,87,1098	0/0:24,0:23:69.19:0,69,860	0/0:18,0:18:51.17:0,51,661	0/0:22,0:22:63.20:0,63,814	0/0:23,0:23:57.18:0,57,740	0/0:20,0:20:57.19:0,57,738	0/0:20,0:20:54.17:0,54,697	0/0:26,0:26:66.21:0,66,850	0/0:17,0:17:45.15:0,45,583	0/0:32,0:32:93.28:0,93,1179	0/0:31,0:31:93.29:0,93,1187	0/0:43,0:43:99:0,126,1623	0/0:23,0:23:66.21:0,66,857	0/0:14,0:14:36.10:0,36,453	0/0:35,0:35:99:0,99,1283	0/0:23,0:23:63.20:0,63,818	1/1:0,18:18:54.15:767,54,0	1/1:0,32:32:81.27:1213,81,0	1/1:0,7:7:21.07:315,21,0
chr10	1060705	.	G	GT	1636.55	PASS	AB=0.912;AC=17;AF=0.304;AN=56;BaseQRankSum=3.598;DP=623;FS=5.170;HRun=13;HaplotypeScore=96.6786;InbreedingCoeff=0.3555;MQ=61.38;MQ0=5;MQRankSum=-3.120;QD=6.18;ReadPosRankSum=-1.257;VQSLOD=2.5080;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:14,2:36:53.67:314,54,0	0/0:5,0:5:8.91:0,9,62	0/0:35,0:19:12.94:0,13,122	0/1:24,0:12:4.57:5,0,17	0/1:28,2:30:10.44:10,0,306	0/1:15,3:19:63.08:63,0,143	0/0:18,0:20:2.38:0,2,160	0/0:9,0:26:17.70:0,18,90	1/1:16,3:19:37:278,37,0	0/0:32,0:32:62.51:0,63,485	0/0:23,0:23:31.09:0,31,197	0/1:13,1:14:10.03:10,0,76	0/0:19,0:19:37.34:0,37,243	0/0:17,0:17:6.73:0,7,166	0/0:20,0:20:40.14:0,40,252	0/1:14,2:17:21.47:21,0,112	1/1:24,4:27:44.80:375,45,0	0/0:17,1:19:9.64:0,10,197	0/1:19,2:22:12.28:12,0,200	0/0:25,1:25:0.05:0,0,223	0/0:19,0:21:33.72:0,34,214	0/0:11,1:15:7.91:0,8,169	0/0:14,1:17:8.91:0,9,189	0/0:31,0:32:57.04:0,57,373	0/0:27,0:29:48.61:0,49,320	1/1:17,4:21:4.39:238,4,0	1/1:10,9:21:30.74:381,31,0	0/1:8,2:9:1.64:103,0,2
chr10	1063366	.	TC	T	1165.02	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.386;DP=804;FS=2.197;HRun=4;HaplotypeScore=76.7467;InbreedingCoeff=0.9995;MQ=91.08;MQ0=0;MQRankSum=-2.445;QD=29.13;ReadPosRankSum=1.598;VQSLOD=3.8790;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,141,1974	0/0:11,0:11:33.11:0,33,455	0/0:31,0:31:72.21:0,72,959	0/0:37,0:37:90.26:0,90,1201	0/0:25,0:25:72.24:0,72,1006	0/0:20,0:20:54.17:0,54,733	0/0:25,0:25:75.24:0,75,1031	0/0:32,0:32:90.30:0,90,1261	1/1:2,38:40:99:1260,105,0	0/0:32,0:32:96.32:0,96,1344	0/0:24,0:24:69.23:0,69,961	0/0:23,0:23:63.21:0,63,881	0/0:26,0:26:75.25:0,75,1049	0/0:23,0:23:69.23:0,69,966	0/0:41,0:41:99:0,120,1633	0/0:24,0:24:66.22:0,66,923	0/0:27,0:27:72.24:0,72,1008	0/0:17,0:17:48.16:0,48,672	0/0:18,0:18:51.17:0,51,714	0/0:38,0:38:99:0,105,1438	0/0:38,0:38:99:0,108,1510	0/0:34,0:34:93.31:0,93,1301	0/0:24,0:24:66.21:0,66,907	0/0:41,0:41:99:0,117,1637	0/0:23,0:23:69.22:0,69,951	0/0:37,0:37:99:0,111,1539	0/0:31,0:31:87.29:0,87,1215	0/0:12,0:12:33.11:0,33,462
chr10	1069087	.	TA	T	1618.98	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.385;DP=593;FS=2.930;HRun=9;HaplotypeScore=57.4213;InbreedingCoeff=0.9880;MQ=77.56;MQ0=0;MQRankSum=-3.177;QD=19.51;ReadPosRankSum=-0.715;VQSLOD=3.7700;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,26:29:69.03:631,69,0	0/0:10,0:10:30.08:0,30,338	0/0:23,0:23:50.45:0,50,512	0/0:17,0:17:30:0,30,321	0/0:31,0:31:87.23:0,87,992	0/0:24,0:24:57.17:0,57,657	0/0:23,0:23:69.21:0,69,796	1/1:9,33:42:95.99:865,96,0	0/0:18,0:18:51.15:0,51,589	0/0:23,0:23:60.17:0,60,682	0/0:21,0:21:45.10:0,45,494	0/0:19,0:19:54.16:0,54,623	0/0:22,1:23:38.72:0,39,691	0/0:22,0:22:54.14:0,54,602	0/0:25,0:25:60.14:0,60,678	0/0:23,0:23:66.20:0,66,762	1/1:2,10:12:29.96:265,30,0	0/0:16,0:16:45.13:0,45,519	0/0:23,0:23:60.18:0,60,693	0/0:29,0:29:78.21:0,78,882	0/0:10,0:10:27.05:0,27,290	0/0:22,0:22:60.17:0,60,683	0/0:20,0:20:51.10:0,51,573	0/0:22,0:21:60.09:0,60,640	0/0:14,0:14:36.11:0,36,416	0/0:26,0:26:60.17:0,60,684	0/0:22,0:22:60.18:0,60,691	0/0:4,0:4:12.01:0,12,117
chr10	1070323	.	T	TTAAA	633.19	PASS	AB=0.867;AC=16;AF=0.444;AN=36;BaseQRankSum=-4.562;DP=290;FS=1.123;HRun=0;HaplotypeScore=48.8682;InbreedingCoeff=0.4913;MQ=69.93;MQ0=2;MQRankSum=0.178;QD=5.51;ReadPosRankSum=-2.210;VQSLOD=1.3745;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:9,0:12:0:0,0,0	0/0:4,0:4:6.02:0,6,91	./.	./.	1/1:7,2:9:5.93:87,6,0	0/1:7,4:11:76.36:194,0,76	./.	1/1:42,0:42:4.98:12,5,0	./.	0/0:12,0:12:9.03:0,9,137	0/0:12,0:12:21.06:0,21,299	0/0:9,0:9:9.03:0,9,137	1/1:4,5:10:5.92:139,6,0	1/1:9,0:9:6.02:120,6,0	1/1:4,2:7:3.01:70,3,0	1/1:9,2:11:3.01:70,3,0	0/0:8,0:12:0.38:0,0,24	0/0:19,0:19:27.09:0,27,411	./.	1/1:3,1:4:3.01:70,3,0	./.	./.	./.	./.	0/0:12,0:12:12.03:0,12,163	./.	0/0:10,0:19:21.02:0,21,195	0/0:10,0:12:3:0,3,28
chr10	1070832	.	G	GGT	188.53	PASS	AB=0.833;AC=6;AF=0.115;AN=52;BaseQRankSum=-1.556;DP=591;FS=6.356;HRun=0;HaplotypeScore=90.8000;InbreedingCoeff=0.4092;MQ=70.60;MQ0=14;MQRankSum=-1.407;QD=2.07;ReadPosRankSum=-1.692;VQSLOD=0.9719;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:18.27:0,18,183	0/0:5,0:5:6.01:0,6,66	./.	./.	0/0:24,0:23:35.87:0,36,342	0/0:15,0:14:14.05:0,14,127	0/0:17,0:17:23.90:0,24,245	1/1:28,0:26:5.98:48,6,0	0/1:18,0:21:13.53:14,0,203	0/0:22,0:21:12.92:0,13,117	0/0:13,0:14:8.68:0,9,99	0/0:12,0:21:35.21:0,35,294	0/0:16,0:15:27.06:0,27,288	0/0:35,0:34:50.92:0,51,525	0/0:20,0:21:23.88:0,24,236	0/0:23,0:25:41.92:0,42,434	0/1:17,16:35:99:154,0,100	0/0:22,0:24:20.80:0,21,196	0/0:20,0:20:3:0,3,31	0/0:16,0:16:21.03:0,21,220	0/0:23,0:21:27.04:0,27,243	1/1:3,3:6:6.02:90,6,0	0/0:23,0:23:30.01:0,30,293	0/0:26,0:26:47.48:0,47,445	0/0:21,0:22:22.79:0,23,291	0/0:18,0:20:26.15:0,26,190	0/0:18,0:18:26.87:0,27,295	0/0:3,0:4:2.68:0,3,11
chr10	1074774	.	T	TTTCC	679.64	PASS	AB=1.000;AC=19;AF=0.396;AN=48;BaseQRankSum=0.606;DP=775;FS=14.874;HRun=0;HaplotypeScore=131.0011;InbreedingCoeff=0.6861;MQ=66.05;MQ0=19;MQRankSum=0.219;QD=2.75;ReadPosRankSum=-0.698;VQSLOD=1.7248;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:28:2.96:76,3,0	0/1:10,0:10:0:0,0,0	./.	./.	1/1:21,0:21:0.47:1,0,0	0/0:26,0:26:18.05:0,18,249	0/0:37,0:37:9.02:0,9,110	./.	0/0:13,0:18:6.01:0,6,56	0/0:37,0:37:24.08:0,24,352	0/0:17,0:17:6.01:0,6,70	0/0:22,0:22:11.31:0,11,159	0/0:25,0:24:18.05:0,18,250	0/0:23,0:23:24.04:0,24,284	1/1:22,0:22:3.01:59,3,0	1/1:24,2:26:9.02:165,9,0	1/1:31,0:31:1.25:3,1,0	0/0:26,0:24:18.05:0,18,250	0/0:24,0:22:9.03:0,9,132	0/0:22,0:22:9.03:0,9,134	1/1:35,1:36:15.02:225,15,0	1/1:21,3:24:8.94:109,9,0	0/0:21,0:21:12.03:0,12,157	0/0:50,0:52:18.02:0,18,209	0/0:21,0:21:6.02:0,6,90	1/1:28,0:30:11.96:130,12,0	./.	1/1:13,0:13:3.01:66,3,0
chr10	1075185	.	GGTTTGC	G	505.43	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.407;DP=648;FS=2.644;HRun=0;HaplotypeScore=139.5643;InbreedingCoeff=0.9834;MQ=86.14;MQ0=0;MQRankSum=-5.415;QD=38.88;ReadPosRankSum=1.092;VQSLOD=3.8131;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:93.32:0,93,3363	0/0:5,0:5:15.05:0,15,565	0/0:24,0:24:72.22:0,72,2220	0/0:26,0:26:72.22:0,72,2326	0/0:18,0:18:54.19:0,54,2008	0/0:26,0:26:78.27:0,78,2919	0/0:26,0:26:78.25:0,78,2745	0/0:32,0:32:96.32:0,96,3382	0/0:36,0:36:99:0,108,4032	0/0:13,0:13:39.13:0,39,1467	0/0:15,0:15:45.15:0,45,1694	0/0:31,0:31:93.31:0,93,3311	0/0:19,0:19:57.20:0,57,2120	0/0:36,0:36:99:0,108,3995	0/0:29,0:29:87.29:0,87,3183	0/0:19,0:19:57.20:0,57,2125	1/1:0,13:13:30.10:600,30,0	0/0:23,0:23:69.22:0,69,2453	0/0:23,0:23:69.23:0,69,2505	0/0:16,0:16:48.16:0,48,1686	0/0:50,0:50:99:0,151,5623	0/0:16,0:16:48.16:0,48,1752	0/0:11,0:11:30.10:0,30,1113	0/0:34,0:34:99:0,102,3751	0/0:20,0:20:60.20:0,60,2150	0/0:20,0:20:60.21:0,60,2233	0/0:20,0:20:60.21:0,60,2220	0/0:15,0:15:45.15:0,45,1693
chr10	1075192	.	ACAC	A	265.96	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.634;DP=634;FS=1.134;HRun=0;HaplotypeScore=97.0873;InbreedingCoeff=0.9828;MQ=83.21;MQ0=0;MQRankSum=-4.638;QD=20.46;ReadPosRankSum=0.703;VQSLOD=3.5971;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:96.29:0,96,2148	0/0:5,0:5:15.05:0,15,355	0/0:18,0:18:54.19:0,54,1222	0/0:26,0:25:38.48:0,38,1357	0/0:19,0:19:54.19:0,54,1267	0/0:28,0:28:84.29:0,84,1915	0/0:20,0:20:60.19:0,60,1344	0/0:35,0:35:99:0,105,2439	0/0:34,0:34:99:0,102,2407	0/0:13,0:13:39.13:0,39,921	0/0:16,0:16:48.16:0,48,1134	0/0:30,0:30:87.30:0,87,2056	0/0:17,0:17:51.18:0,51,1202	0/0:35,0:35:99:0,102,2295	0/0:27,0:27:81.28:0,81,1888	0/0:17,0:17:51.18:0,51,1205	1/1:0,13:13:30.09:360,30,0	0/0:20,0:20:60.21:0,60,1419	0/0:23,0:23:69.24:0,69,1585	0/0:14,0:14:39.13:0,39,893	0/0:53,0:53:99:0,157,3673	0/0:16,0:16:48.16:0,48,1134	0/0:10,0:10:27.08:0,27,557	0/0:37,0:38:99:0,108,2352	0/0:17,0:17:51.18:0,51,1206	0/0:21,0:21:63.22:0,63,1435	0/0:20,0:20:60.21:0,60,1393	0/0:17,0:17:51.18:0,51,1174
chr10	1076202	.	G	GT	1005.74	PASS	AB=0.934;AC=8;AF=0.143;AN=56;BaseQRankSum=-3.491;DP=642;FS=0.533;HRun=11;HaplotypeScore=79.6964;InbreedingCoeff=0.4712;MQ=64.30;MQ0=5;MQRankSum=0.993;QD=6.33;ReadPosRankSum=-2.849;VQSLOD=1.6078;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:19,18:35:31.51:506,32,0	0/0:8,0:8:17.92:0,18,139	0/0:54,0:24:15.52:0,16,145	0/1:40,0:18:1:1,0,77	0/0:25,0:25:28.40:0,28,388	0/0:18,0:18:47.77:0,48,365	0/0:12,0:12:11.24:0,11,223	1/1:14,20:34:65.36:608,65,0	0/0:11,0:11:26.69:0,27,199	0/0:25,0:26:49.79:0,50,377	0/1:21,2:24:9.02:9,0,285	0/0:17,0:17:38.84:0,39,301	0/0:17,0:18:37.52:0,38,272	0/0:21,0:21:38.61:0,39,287	0/0:18,0:18:47.72:0,48,364	0/0:23,0:23:63.19:0,63,483	0/0:26,0:26:49.53:0,50,360	0/0:25,0:25:65.37:0,65,468	0/0:18,0:19:37.89:0,38,284	0/0:15,0:15:44.20:0,44,331	0/1:7,1:8:9.52:10,0,118	0/1:11,1:12:9.54:10,0,118	0/0:21,0:21:47.72:0,48,362	0/0:28,0:26:53.24:0,53,387	0/0:30,1:31:50.23:0,50,569	0/0:20,1:21:15.90:0,16,298	0/0:31,0:32:71.93:0,72,519	0/0:12,0:12:23.74:0,24,185
chr10	1076940	.	TG	T	34.58	PASS	AB=0.878;AC=6;AF=0.107;AN=56;BaseQRankSum=1.407;DP=681;FS=1.417;HRun=10;HaplotypeScore=118.4660;InbreedingCoeff=-0.1259;MQ=68.77;MQ0=2;MQRankSum=1.384;QD=0.29;ReadPosRankSum=-1.069;VQSLOD=-0.3268;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:77.14:0,77,485	0/1:4,1:5:11.02:11,0,110	0/0:28,0:20:21.73:0,22,262	0/0:33,0:25:32.21:0,32,297	0/1:9,4:13:80.15:80,0,108	0/1:22,4:26:24.17:24,0,408	0/0:22,1:23:19:0,19,404	0/0:30,0:29:42.51:0,43,249	0/0:24,0:24:67.04:0,67,440	0/0:19,0:19:32.82:0,33,322	0/0:7,0:7:9.01:0,9,91	0/1:18,2:20:7.71:8,0,321	0/0:27,0:27:41.99:0,42,399	0/0:19,1:20:6.99:0,7,275	0/1:37,5:42:19.98:20,0,640	0/0:31,0:31:39.48:0,39,580	0/0:24,0:24:51.84:0,52,334	0/0:25,1:26:25.02:0,25,467	0/1:15,0:15:7.91:8,0,131	0/0:11,0:11:18.05:0,18,198	0/0:65,5:70:31.50:0,32,946	0/0:18,1:19:4.03:0,4,272	0/0:9,0:9:21.01:0,21,216	0/0:46,2:48:79.05:0,79,1002	0/0:13,0:13:16.88:0,17,187	0/0:32,0:33:66.53:0,67,341	0/0:16,0:16:43.59:0,44,252	0/0:9,0:9:26.09:0,26,146
chr10	1077028	.	ATG	A	591.83	PASS	AB=0.974;AC=22;AF=0.423;AN=52;BaseQRankSum=4.320;DP=901;FS=3.914;HRun=0;HaplotypeScore=163.8440;InbreedingCoeff=-0.4358;MQ=51.71;MQ0=31;MQRankSum=0.077;QD=0.86;ReadPosRankSum=-0.697;VQSLOD=2.7090;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:34,0:34:30.15:30,0,229	0/0:5,0:5:6.02:0,6,91	./.	./.	0/1:29,0:29:1.59:2,0,398	0/1:29,0:29:56.45:56,0,450	0/1:30,1:31:22.29:22,0,480	0/1:49,0:43:11.74:12,0,40	0/1:31,0:36:18.46:18,0,257	0/0:41,1:42:10.69:0,11,751	0/0:22,1:23:2.70:0,3,467	0/1:30,1:31:7.47:7,0,625	0/1:33,2:34:19.08:19,0,504	0/0:27,0:27:30.10:0,30,436	0/1:41,2:43:17.93:18,0,1001	0/1:35,4:39:85.53:86,0,880	1/1:7,0:27:8.58:44,9,0	0/1:32,0:31:87.07:87,0,570	0/0:25,0:16:10.98:0,11,176	1/1:7,10:17:9.03:101,9,0	0/1:76,2:77:72.01:72,0,686	0/1:23,2:26:22.04:22,0,488	0/1:35,2:36:19.78:20,0,499	0/1:61,3:63:9.89:10,0,1066	0/0:29,0:29:50.88:0,51,679	0/1:13,0:26:57.47:57,0,135	0/1:13,0:15:30.85:31,0,60	0/1:7,0:12:30.20:30,0,108
chr10	1077508	.	G	GT	845.99	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-7.179;DP=558;FS=4.954;HRun=10;HaplotypeScore=59.7896;InbreedingCoeff=0.8757;MQ=68.74;MQ0=0;MQRankSum=0.092;QD=19.23;ReadPosRankSum=0.320;VQSLOD=4.4301;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,19:21:42.11:448,42,0	0/0:6,0:6:17.98:0,18,148	0/0:25,0:18:16.22:0,16,166	0/0:19,0:13:13.58:0,14,160	0/0:26,0:26:65.85:0,66,534	0/0:23,0:24:58.89:0,59,464	0/0:11,0:11:21.44:0,21,174	0/0:38,0:38:80.84:0,81,656	0/0:24,0:25:67.87:0,68,540	0/0:36,0:35:83.87:0,84,687	0/0:20,0:19:44.94:0,45,369	0/0:14,0:14:38.95:0,39,320	0/0:14,1:15:6.65:0,7,263	0/0:17,0:17:38.92:0,39,317	0/0:22,0:22:28.26:0,28,431	0/0:19,0:19:43.95:0,44,351	1/1:3,20:23:29.49:519,29,0	0/0:10,0:10:23.97:0,24,197	0/0:17,0:18:37.98:0,38,301	0/0:29,1:27:18.91:0,19,360	0/0:6,0:6:11.98:0,12,99	0/0:13,1:14:6.96:0,7,262	0/0:15,0:15:41.95:0,42,345	0/0:11,0:11:26.97:0,27,222	0/0:25,0:23:50.91:0,51,418	0/0:25,0:25:59.72:0,60,480	0/0:30,0:30:68.12:0,68,623	0/0:12,0:12:29.91:0,30,246
chr10	1077777	.	C	CT	622.97	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-1.253;DP=361;FS=4.990;HRun=11;HaplotypeScore=37.2444;InbreedingCoeff=0.7144;MQ=59.40;MQ0=1;MQRankSum=-1.593;QD=13.25;ReadPosRankSum=-1.825;VQSLOD=2.4741;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,18:21:15.69:326,16,0	0/0:5,0:6:13.99:0,14,99	0/0:4,0:2:5.92:0,6,39	0/0:7,0:5:5.77:0,6,36	0/0:12,0:12:26.69:0,27,209	0/0:12,0:12:26.87:0,27,208	0/0:12,0:10:23.90:0,24,186	1/1:6,17:24:44.41:415,44,0	0/0:11,0:11:20.91:0,21,163	0/0:26,1:25:23.37:0,23,364	0/0:21,0:21:53.79:0,54,418	0/0:9,0:7:20.92:0,21,162	0/0:16,0:16:39.30:0,39,303	0/0:17,0:17:29.83:0,30,230	0/0:10,0:10:23.91:0,24,186	0/0:10,0:10:5.95:0,6,46	0/0:2,0:12:18.32:0,18,53	0/0:16,0:15:38.85:0,39,301	0/0:7,0:7:13.98:0,14,97	0/0:13,1:14:11.44:0,11,271	0/0:13,0:13:32.81:0,33,250	0/0:6,0:6:8.92:0,9,70	0/0:10,0:10:29.87:0,30,230	0/0:8,0:5:11.95:0,12,93	0/0:12,0:12:32.87:0,33,255	0/0:15,0:15:26.87:0,27,209	0/0:14,0:14:30.34:0,30,233	0/0:11,1:12:2.44:0,2,202
chr10	1077876	.	C	CCT	1609.30	PASS	AB=0.600;AC=39;AF=0.886;AN=44;BaseQRankSum=-1.876;DP=166;FS=3.522;HRun=0;HaplotypeScore=31.3948;InbreedingCoeff=0.2377;MQ=45.83;MQ0=3;MQRankSum=-2.050;QD=12.38;ReadPosRankSum=0.410;VQSLOD=2.4939;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,8:7:18.06:238,18,0	1/1:0,1:1:3.01:34,3,0	0/0:7,0:2:6.02:0,6,68	0/0:14,0:6:12.01:0,12,126	1/1:1,6:2:3.01:60,3,0	1/1:0,4:2:3.01:40,3,0	1/1:0,4:1:3.01:39,3,0	1/1:3,10:11:30.10:486,30,0	1/1:0,7:2:6.02:76,6,0	1/1:0,6:2:3.01:44,3,0	1/1:0,4:1:0.89:2,1,0	1/1:0,8:3:6.02:69,6,0	1/1:5,7:7:8.15:94,8,0	0/1:2,6:5:11.70:54,0,12	1/1:2,8:5:10.27:112,10,0	1/1:1,7:4:7.57:80,8,0	1/1:0,2:2:3.01:31,3,0	1/1:0,2:1:3.01:46,3,0	1/1:0,4:2:6.02:102,6,0	1/1:0,5:2:3.01:36,3,0	./.	./.	./.	./.	./.	1/1:1,4:2:3.48:44,3,0	1/1:0,10:3:3.01:36,3,0	./.
chr10	1077884	.	TG	T	1534.28	PASS	AB=0.533;AC=43;AF=0.896;AN=48;BaseQRankSum=-2.901;DP=159;FS=11.032;HRun=4;HaplotypeScore=25.8833;InbreedingCoeff=0.2129;MQ=46.71;MQ0=3;MQRankSum=-3.086;QD=12.18;ReadPosRankSum=-0.490;VQSLOD=0.3344;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,8:8:15.03:154,15,0	1/1:0,1:1:3.01:30,3,0	0/0:5,0:2:5.88:0,6,51	0/0:13,0:6:8.88:0,9,75	./.	1/1:0,4:2:3.01:32,3,0	1/1:0,5:2:6.02:67,6,0	1/1:1,10:10:27.08:318,27,0	1/1:1,6:2:6.01:61,6,0	1/1:0,4:1:3.01:33,3,0	1/1:0,5:2:2.94:36,3,0	1/1:0,8:3:5.95:49,6,0	1/1:2,9:6:12.04:142,12,0	0/1:0,7:4:7.12:25,0,7	1/1:0,10:5:15.04:161,15,0	1/1:0,9:5:12.03:134,12,0	1/1:1,2:3:6.01:62,6,0	1/1:0,2:1:3.01:35,3,0	1/1:1,2:1:3.01:35,3,0	1/1:2,4:2:3.01:35,3,0	./.	1/1:0,2:1:3.01:36,3,0	./.	./.	1/1:2,1:1:3.01:36,3,0	1/1:1,3:2:6.02:70,6,0	1/1:1,9:3:6.01:62,6,0	1/1:0,1:1:3.01:36,3,0
chr10	1078256	.	GA	G	408.38	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.032;DP=663;FS=3.936;HRun=1;HaplotypeScore=75.6054;InbreedingCoeff=0.8977;MQ=88.72;MQ0=0;MQRankSum=-0.360;QD=29.17;ReadPosRankSum=0.237;VQSLOD=3.3357;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:54.18:0,54,857	0/0:9,0:9:27.06:0,27,403	0/0:34,0:34:99:0,102,1618	0/0:28,0:28:67.57:0,68,1152	0/0:29,0:29:75.26:0,75,1189	0/0:23,0:23:63.21:0,63,1004	0/0:24,0:24:69.24:0,69,1102	0/0:39,0:39:99:0,117,1796	0/0:27,0:27:78.27:0,78,1245	0/0:25,0:25:72.21:0,72,1116	0/0:15,0:15:42.14:0,42,669	0/0:27,0:27:78.27:0,78,1245	0/0:15,0:15:42.10:0,42,640	0/0:31,0:31:84.27:0,84,1315	0/0:37,0:37:99:0,105,1675	0/0:36,0:36:99:0,105,1676	1/1:0,14:14:36.12:503,36,0	0/0:7,0:7:18.06:0,18,288	0/0:19,0:19:57.19:0,57,911	0/0:24,0:24:63.20:0,63,983	0/0:38,0:38:99:0,108,1701	0/0:18,0:18:54.18:0,54,861	0/0:16,0:16:39.12:0,39,600	0/0:26,0:26:69.22:0,69,1074	0/0:19,0:19:48.12:0,48,738	0/0:29,0:29:87.26:0,87,1315	0/0:30,0:30:87.30:0,87,1386	0/0:2,0:2:6.02:0,6,96
chr10	1081149	.	A	AAAAC	1202.95	PASS	AC=6;AF=0.111;AN=54;BaseQRankSum=-4.588;DP=671;FS=7.563;HRun=0;HaplotypeScore=108.6393;InbreedingCoeff=0.9366;MQ=62.00;MQ0=2;MQRankSum=-0.251;QD=17.43;ReadPosRankSum=-0.469;VQSLOD=2.8376;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:17,10:27:21.96:496,22,0	0/0:13,0:13:18.06:0,18,280	./.	0/0:13,0:9:6.01:0,6,69	0/0:33,0:33:48.15:0,48,721	0/0:34,0:34:54.16:0,54,795	0/0:23,0:23:45.12:0,45,638	0/0:30,0:30:27.07:0,27,376	0/0:23,0:23:39.13:0,39,605	0/0:30,0:30:54.18:0,54,815	0/0:22,0:22:32.39:0,32,509	1/1:8,12:22:24.08:565,24,0	0/0:29,0:29:57.17:0,57,841	0/0:21,0:21:45.13:0,45,659	0/0:29,0:29:48.13:0,48,684	0/0:26,0:26:48.14:0,48,702	1/1:14,5:20:12.51:279,13,0	0/0:17,0:17:13.12:0,13,352	0/0:31,0:31:42.14:0,42,634	0/0:35,0:35:60.19:0,60,908	0/0:18,0:19:42.14:0,42,624	0/0:24,0:24:39.13:0,39,605	0/0:22,0:21:30.09:0,30,443	0/0:16,0:16:24.08:0,24,368	0/0:16,0:16:21.06:0,21,305	0/0:26,0:26:51.17:0,51,771	0/0:48,0:45:81.25:0,81,1205	0/0:8,0:8:21.07:0,21,326
chr10	1083345	.	C	CT	1224.34	PASS	AB=0.600;AC=5;AF=0.089;AN=56;BaseQRankSum=-5.754;DP=411;FS=0.621;HRun=9;HaplotypeScore=38.6812;InbreedingCoeff=0.5667;MQ=57.97;MQ0=14;MQRankSum=-0.255;QD=18.27;ReadPosRankSum=-1.355;VQSLOD=2.8067;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,23:28:57.17:655,57,0	0/0:8,0:8:9:0,9,81	0/0:10,0:5:6:0,6,55	0/0:7,0:3:3:0,3,27	0/0:29,0:29:66.03:0,66,604	0/0:15,0:15:30.01:0,30,274	0/0:14,0:12:23.98:0,24,214	1/1:15,16:28:29.67:577,30,0	0/0:5,0:5:9:0,9,82	0/0:17,0:17:44.98:0,45,404	0/0:20,0:20:28.68:0,29,290	0/1:2,4:6:36.88:120,0,37	0/0:8,0:8:21.01:0,21,192	0/0:9,0:9:27.01:0,27,247	0/0:15,0:15:36.02:0,36,329	0/0:8,0:8:18.01:0,18,165	0/0:24,0:23:54:0,54,489	0/0:21,0:24:41.26:0,41,336	0/0:28,0:27:68.80:0,69,627	0/0:14,0:14:30.01:0,30,275	0/0:6,0:5:5.99:0,6,55	0/0:2,0:2:6:0,6,54	0/0:6,0:6:12.01:0,12,110	0/0:7,0:7:15.01:0,15,137	0/0:21,0:21:47.05:0,47,418	0/0:17,0:16:36:0,36,326	0/0:24,0:23:57.03:0,57,520	0/0:4,0:4:6:0,6,55
chr10	1084317	.	TTTG	T	3068.26	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=10.889;DP=608;FS=3.513;HRun=0;HaplotypeScore=86.4112;InbreedingCoeff=0.9917;MQ=75.49;MQ0=0;MQRankSum=-2.750;QD=34.87;ReadPosRankSum=-1.976;VQSLOD=3.8167;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,20:23:51.17:807,51,0	0/0:5,0:5:15.05:0,15,305	0/0:26,0:25:38:0,38,681	0/0:20,0:20:44.93:0,45,842	0/0:25,0:25:75.24:0,75,1491	0/0:32,0:32:93.32:0,93,2025	0/0:15,0:15:36.04:0,36,717	1/1:4,38:42:99:1549,108,0	0/0:22,0:22:63.20:0,63,1285	0/0:33,0:33:96.79:0,97,1979	0/0:14,0:14:42.14:0,42,919	0/0:25,0:25:60.19:0,60,1274	0/0:21,0:21:60.19:0,60,1232	0/0:9,0:9:27.08:0,27,527	0/0:34,0:34:90.27:0,90,1844	0/0:10,0:10:21.07:0,21,459	1/1:2,21:23:54.18:855,54,0	0/0:16,0:16:42.14:0,42,894	0/0:33,0:33:90.30:0,90,1880	0/0:29,0:29:84.29:0,84,1772	0/0:23,0:23:68.60:0,69,1383	0/0:21,0:21:63.22:0,63,1313	0/0:19,0:19:54.17:0,54,1126	0/0:10,0:10:24.08:0,24,506	0/0:14,0:14:42.14:0,42,921	0/0:20,0:20:51.16:0,51,1060	0/0:20,0:20:57.19:0,57,1232	0/0:24,0:24:69.20:0,69,1368
chr10	1085798	.	C	CTG	4822.32	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-13.293;DP=847;FS=11.578;HRun=0;HaplotypeScore=94.8703;InbreedingCoeff=0.9989;MQ=76.27;MQ0=2;MQRankSum=0.184;QD=43.84;ReadPosRankSum=-0.657;VQSLOD=5.6115;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,38:39:96.33:1760,96,0	0/0:21,0:21:63.21:0,63,901	0/0:22,0:22:30.13:0,30,689	0/0:18,0:17:23.14:0,23,484	0/0:28,0:28:84.27:0,84,1181	0/0:23,0:23:54.18:0,54,773	0/0:21,0:21:63.19:0,63,882	1/1:5,35:40:99:1797,102,0	0/0:25,0:25:75.23:0,75,1051	0/0:39,0:39:99:0,105,1499	0/0:32,0:32:87.29:0,87,1246	0/0:45,0:45:99:0,132,1871	0/0:38,0:38:99:0,111,1570	0/0:38,0:38:99:0,111,1572	0/0:40,0:40:99:0,117,1675	0/0:38,0:38:99:0,111,1589	1/1:3,27:29:69.24:1265,69,0	0/0:23,0:23:63.21:0,63,897	0/0:13,0:13:36.59:0,37,513	0/0:32,0:32:84.28:0,84,1204	0/0:31,0:31:93.31:0,93,1329	0/0:32,0:32:93.31:0,93,1331	0/0:27,0:27:75.25:0,75,1072	0/0:35,0:35:99:0,99,1363	0/0:30,0:30:87.29:0,87,1246	0/0:33,0:33:96.31:0,96,1360	0/0:36,0:35:99:0,102,1455	0/0:17,0:17:45.15:0,45,643
chr10	1085969	.	T	TCCATGGGC	1475.18	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=0.987;DP=742;FS=3.972;HRun=0;HaplotypeScore=183.2790;InbreedingCoeff=0.9959;MQ=88.76;MQ0=0;MQRankSum=-6.113;QD=77.64;ReadPosRankSum=-0.769;VQSLOD=3.6547;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:87.27:0,87,2341	0/0:15,0:15:45.15:0,45,1273	0/0:31,0:31:83.63:0,84,2142	0/0:30,0:30:81.22:0,81,2012	0/0:21,0:21:51.18:0,51,1408	0/0:26,0:26:75.26:0,75,2131	0/0:26,0:26:72.25:0,72,1943	0/0:38,0:38:99:0,99,2536	0/0:20,0:20:60.21:0,60,1686	0/0:32,0:32:87.30:0,87,2342	0/0:16,0:16:45.14:0,45,1199	0/0:33,0:33:99:0,99,2770	0/0:24,0:24:72.25:0,72,2031	0/0:31,0:31:84.29:0,84,2350	0/0:29,0:29:84.27:0,84,2340	0/0:29,0:29:84.27:0,84,2349	1/1:7,9:19:39.13:1570,39,0	0/0:25,0:25:75.22:0,75,2063	0/0:15,0:15:45.15:0,45,1253	0/0:31,0:31:84.28:0,84,2277	0/0:30,0:30:87.26:0,87,2388	0/0:24,0:24:72.25:0,72,2028	0/0:19,0:19:54.18:0,54,1536	0/0:28,0:28:81.28:0,81,2247	0/0:36,0:36:99:0,105,2943	0/0:31,0:31:87.30:0,87,2389	0/0:44,0:44:99:0,123,3365	0/0:8,0:8:21.07:0,21,583
chr10	1091394	.	CTA	C	79.15	PASS	AB=0.955;AC=9;AF=0.161;AN=56;BaseQRankSum=2.579;DP=403;FS=0.000;HRun=0;HaplotypeScore=256.1398;InbreedingCoeff=-0.0463;MQ=40.92;MQ0=4;MQRankSum=-0.198;QD=0.58;ReadPosRankSum=-1.431;VQSLOD=1.5484;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:15,1:16:0.52:1,0,43	0/0:11,0:10:3.96:0,4,213	0/0:9,0:2:2.74:0,3,22	0/0:10,0:3:0.87:0,1,2	0/0:11,0:11:7.17:0,7,74	0/0:19,0:19:39.94:0,40,389	0/0:8,0:8:18.67:0,19,128	1/1:7,0:4:0.87:2,1,0	0/0:2,0:2:2.92:0,3,8	0/0:19,1:20:33.69:0,34,463	0/0:18,0:18:20.14:0,20,222	0/1:20,1:21:22.08:22,0,194	0/0:14,0:14:36.30:0,36,334	0/0:12,0:12:24.86:0,25,280	0/0:20,1:20:42.43:0,42,458	0/0:13,0:13:33.62:0,34,296	0/0:13,0:18:6.41:0,6,82	0/0:10,0:10:7.84:0,8,72	0/0:9,0:9:12.33:0,12,167	0/0:12,0:11:15.73:0,16,155	0/0:13,0:13:4.12:0,4,22	0/0:21,0:21:11.15:0,11,258	0/0:16,0:16:21.22:0,21,203	0/1:14,1:15:4.41:4,0,77	0/1:23,5:27:32.80:33,0,254	0/1:19,0:19:42.23:42,0,101	0/1:19,0:19:15.75:16,0,150	0/1:11,0:11:35.13:76,0,35
chr10	1091404	.	TCTC	T	1503.62	PASS	AB=0.982;AC=24;AF=0.429;AN=56;BaseQRankSum=0.444;DP=370;FS=16.907;HRun=0;HaplotypeScore=259.8432;InbreedingCoeff=-0.5444;MQ=39.88;MQ0=2;MQRankSum=1.351;QD=4.56;ReadPosRankSum=-3.533;VQSLOD=0.5965;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:15,0:15:17.85:52,0,18	0/0:10,0:10:10.31:0,10,135	0/0:5,0:3:3.01:0,3,45	0/0:6,0:2:1.36:0,1,3	0/1:12,0:12:3.58:60,0,4	0/1:16,0:16:24.19:24,0,186	0/1:8,0:8:28.76:37,0,29	0/0:7,0:7:17.18:0,17,88	0/1:2,0:2:7.01:13,0,7	0/1:23,0:23:17.36:17,0,249	0/1:18,0:18:43.51:169,0,44	0/1:17,0:17:70.58:84,0,71	0/1:15,0:15:2.35:2,0,153	0/0:12,0:12:15.16:0,15,160	0/1:20,0:19:65.38:65,0,169	0/1:13,0:13:5.96:6,0,103	1/1:17,0:17:22.72:305,23,0	0/1:8,0:8:30.15:30,0,38	0/1:5,0:5:5.02:5,0,73	0/1:15,0:14:29.38:29,0,97	0/1:8,0:8:12.70:70,0,13	0/1:19,0:19:99:126,0,113	0/1:13,0:13:63.12:89,0,63	0/1:12,0:12:14.04:86,0,14	0/1:27,0:26:99:189,0,116	0/1:16,2:18:58.34:58,0,80	0/1:13,4:18:62.17:62,0,110	0/1:10,1:11:40.69:75,0,41
chr10	1091519	.	ACTGAATAGAGCC	A	495.14	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.142;DP=555;FS=3.657;HRun=0;HaplotypeScore=185.8079;InbreedingCoeff=0.9915;MQ=88.33;MQ0=0;MQRankSum=-4.084;QD=35.37;ReadPosRankSum=-1.470;VQSLOD=2.8408;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,13:14:21.03:587,21,0	0/0:8,0:8:24.06:0,24,1231	0/0:21,0:22:53.85:0,54,2703	0/0:21,0:21:63.22:0,63,3370	0/0:22,0:22:63.22:0,63,3433	0/0:29,0:29:84.26:0,84,4809	0/0:16,0:16:45.15:0,45,2694	0/0:28,0:28:84.29:0,84,4228	0/0:15,0:15:42.14:0,42,2586	0/0:15,0:15:39.13:0,39,2252	0/0:9,0:9:27.09:0,27,1542	0/0:26,0:26:78.25:0,78,4305	0/0:16,0:16:48.15:0,48,2425	0/0:27,0:27:72.25:0,72,4301	0/0:17,0:17:51.15:0,51,2512	0/0:23,0:23:66.22:0,66,3770	0/0:32,0:32:90.24:0,90,4770	0/0:16,0:16:48.16:0,48,2667	0/0:22,0:22:63.22:0,63,3381	0/0:27,0:27:78.22:0,78,4260	0/0:24,0:24:69.07:0,69,3789	0/0:20,0:20:57.17:0,57,2829	0/0:21,0:21:57.15:0,57,2860	0/0:11,0:11:33.11:0,33,1750	0/0:19,0:19:54.17:0,54,3074	0/0:19,0:19:54.13:0,54,2681	0/0:27,0:27:81.25:0,81,4443	0/0:9,0:9:27.09:0,27,1662
chr10	1094326	.	AC	A	2862.13	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.512;DP=616;FS=0.000;HRun=5;HaplotypeScore=59.8730;InbreedingCoeff=0.9984;MQ=88.81;MQ0=0;MQRankSum=-2.255;QD=29.51;ReadPosRankSum=-0.620;VQSLOD=3.6483;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,29:32:81.23:919,81,0	0/0:14,0:14:36.12:0,36,491	0/0:28,0:28:78.24:0,78,1044	0/0:27,0:27:80.01:0,80,1012	0/0:28,0:28:84.28:0,84,1141	0/0:27,0:27:69.21:0,69,912	0/0:25,0:25:72.22:0,72,953	1/1:2,38:40:99:1270,114,0	0/0:13,0:13:36.10:0,36,472	0/0:18,0:18:51.11:0,51,659	0/0:16,0:16:45.14:0,45,598	0/0:20,0:20:60.20:0,60,817	0/0:14,0:14:42.14:0,42,575	0/0:18,0:18:51.17:0,51,698	0/0:17,0:17:45.15:0,45,612	0/0:26,0:26:75.22:0,75,988	1/1:0,25:25:72.21:817,72,0	0/0:20,0:20:60.18:0,60,801	0/0:16,0:16:39.08:0,39,496	0/0:24,0:24:66.21:0,66,883	0/0:34,0:34:96.32:0,96,1313	0/0:20,0:20:57.16:0,57,743	0/0:8,0:8:21.07:0,21,287	0/0:38,0:38:99:0,111,1476	0/0:17,0:17:51.14:0,51,665	0/0:18,0:18:45.14:0,45,601	0/0:19,0:19:57.18:0,57,764	0/0:14,0:14:42.14:0,42,572
chr10	1095897	.	C	CT	671.75	PASS	AB=0.874;AC=8;AF=0.143;AN=56;BaseQRankSum=2.295;DP=563;FS=4.249;HRun=13;HaplotypeScore=71.7662;InbreedingCoeff=0.4099;MQ=60.58;MQ0=16;MQRankSum=-2.090;QD=5.21;ReadPosRankSum=-3.226;VQSLOD=1.5817;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:21,12:37:23.57:380,0,24	0/0:8,0:8:14.88:0,15,103	0/0:17,0:5:5.61:0,6,32	0/0:23,0:10:7.46:0,7,55	0/0:21,0:21:40.22:0,40,262	0/0:24,2:30:34.70:0,35,359	0/0:21,1:22:16.72:0,17,259	1/1:13,2:26:51:291,51,0	0/0:12,0:12:19.88:0,20,133	0/0:20,1:21:35.54:0,36,242	0/0:16,1:16:1.84:0,2,157	0/1:13,1:14:0.32:0,0,118	0/0:14,0:14:26.66:0,27,184	0/0:11,0:12:34.75:0,35,231	0/1:8,1:9:7.04:7,0,102	0/1:18,1:19:8.38:8,0,193	1/1:8,1:15:22.89:120,23,0	0/0:24,0:23:42.51:0,43,268	0/0:19,0:20:36.71:0,37,234	0/0:31,0:32:45.48:0,45,298	0/0:8,0:11:23.93:0,24,141	0/0:22,0:22:31.31:0,31,308	0/0:18,0:21:32.82:0,33,201	0/0:22,0:23:37.69:0,38,252	0/0:28,1:29:33.62:0,34,364	0/0:13,0:15:21.87:0,22,135	0/0:22,0:23:44.37:0,44,300	0/0:13,0:13:19.58:0,20,161
chr10	1096003	.	CT	C	954.88	PASS	AB=0.818;AC=15;AF=0.268;AN=56;BaseQRankSum=11.411;DP=583;FS=0.858;HRun=13;HaplotypeScore=73.7192;InbreedingCoeff=0.6852;MQ=66.75;MQ0=12;MQRankSum=-0.122;QD=4.73;ReadPosRankSum=1.074;VQSLOD=1.8428;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,0:33:54.99:159,55,0	0/0:8,1:10:5.11:0,5,198	0/0:23,0:10:12.86:0,13,95	0/1:17,0:8:6.06:6,0,13	0/0:35,1:34:45.48:0,45,521	0/0:16,1:18:14.04:0,14,276	0/0:20,0:19:1.50:0,1,237	1/1:9,0:32:43.54:129,44,0	1/1:5,12:17:26.75:197,27,0	0/0:18,2:18:17.06:0,17,308	0/0:20,0:20:36.04:0,36,342	0/0:12,0:12:21.01:0,21,195	0/0:18,0:19:39.04:0,39,367	0/0:19,2:21:26.11:0,26,397	0/0:12,2:14:8.10:0,8,232	0/0:17,0:18:41.90:0,42,389	1/1:5,0:25:32.58:96,33,0	0/0:22,0:22:48.02:0,48,451	0/0:13,2:15:13.97:0,14,275	0/0:23,0:27:62.65:0,63,561	0/0:10,0:10:20.98:0,21,194	0/0:15,3:19:23.86:0,24,214	0/0:24,1:25:29.13:0,29,425	0/1:21,3:26:2.98:3,0,402	0/0:29,0:30:51.79:0,52,516	0/1:9,16:25:10.11:231,0,10	1/1:5,16:22:39.65:274,40,0	1/1:0,2:2:5.97:44,6,0
chr10	1097425	.	CAAT	C	961.46	PASS	AB=0.917;AC=7;AF=0.140;AN=50;BaseQRankSum=4.015;DP=285;FS=2.836;HRun=0;HaplotypeScore=46.5518;InbreedingCoeff=0.5725;MQ=65.34;MQ0=0;MQRankSum=2.439;QD=19.62;ReadPosRankSum=1.200;VQSLOD=2.8144;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:14:12.01:0,12,151	0/0:6,0:6:6.02:0,6,119	0/0:8,0:7:2.99:0,3,23	./.	0/1:10,1:11:23.58:24,0,280	0/0:15,0:15:24.08:0,24,477	0/0:3,0:3:6.02:0,6,119	0/0:34,0:34:52.72:0,53,458	0/0:15,0:15:9.03:0,9,179	0/0:9,0:9:12.04:0,12,232	0/0:4,0:4:6.02:0,6,119	./.	0/0:6,0:6:15.05:0,15,297	0/0:10,0:10:9.03:0,9,175	0/0:19,0:19:30.10:0,30,574	0/0:12,0:11:27.09:0,27,534	0/0:7,0:15:8.98:0,9,92	0/0:9,0:9:12.04:0,12,209	0/0:12,0:12:21.07:0,21,418	0/0:8,0:8:9.03:0,9,179	0/0:6,0:6:9.03:0,9,179	./.	0/0:6,0:6:6.02:0,6,96	0/0:3,0:3:6.02:0,6,119	0/0:13,0:13:24.55:0,25,479	1/1:5,4:9:12.04:167,12,0	1/1:6,13:19:36.03:494,36,0	1/1:1,9:10:30.10:416,30,0
chr10	1097926	.	ACT	A	998.42	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.848;DP=772;FS=2.702;HRun=0;HaplotypeScore=91.8121;InbreedingCoeff=0.9959;MQ=85.24;MQ0=0;MQRankSum=-2.605;QD=38.40;ReadPosRankSum=1.117;VQSLOD=5.7603;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,132,2540	0/0:12,0:12:36.10:0,36,693	0/0:29,0:29:87.24:0,87,1588	0/0:26,0:26:68.50:0,68,1356	0/0:26,0:26:78.25:0,78,1516	0/0:29,0:28:84.27:0,84,1669	0/0:21,0:21:63.22:0,63,1279	0/0:34,0:34:99:0,102,1905	0/0:39,0:39:99:0,117,2303	0/0:32,0:32:96.32:0,96,1905	0/0:22,0:22:66.23:0,66,1338	0/0:38,0:38:99:0,114,2227	0/0:26,0:26:78.27:0,78,1553	0/0:26,0:26:78.24:0,78,1499	0/0:30,0:30:87.30:0,87,1766	0/0:34,0:34:99:0,102,1978	1/1:0,26:26:69.17:1093,69,0	0/0:20,0:20:60.14:0,60,1175	0/0:31,0:31:84.25:0,84,1563	0/0:19,0:19:57.20:0,57,1157	0/0:44,0:44:99:0,132,2539	0/0:27,0:27:81.26:0,81,1607	0/0:21,0:21:63.22:0,63,1254	0/0:22,0:22:66.20:0,66,1291	0/0:22,0:22:66.20:0,66,1268	0/0:32,0:32:96.33:0,96,1940	0/0:32,0:32:96.31:0,96,1907	0/0:7,0:7:21.07:0,21,426
chr10	1098762	.	T	TAGGAG	9145.80	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-10.413;DP=697;FS=9.835;HRun=0;HaplotypeScore=119.1077;InbreedingCoeff=0.9891;MQ=87.92;MQ0=0;MQRankSum=-10.456;QD=75.59;ReadPosRankSum=-0.873;VQSLOD=6.3959;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,48:55:99:3772,123,0	0/0:18,0:18:51.17:0,51,1087	0/0:34,0:34:87.29:0,87,1788	0/0:24,0:23:63.22:0,63,1308	0/0:28,0:28:78.25:0,78,1589	0/0:19,0:19:54.19:0,54,1150	0/0:27,0:27:78.25:0,78,1594	1/1:17,26:43:99:3339,111,0	0/0:28,0:28:81.26:0,81,1687	0/0:26,0:26:78.27:0,78,1646	0/0:17,0:17:51.18:0,51,1087	0/0:26,0:26:75.26:0,75,1598	0/0:27,0:27:75.26:0,75,1580	0/0:19,0:19:57.18:0,57,1175	0/0:22,0:22:60.21:0,60,1278	0/0:19,0:19:57.20:0,57,1215	1/1:1,22:23:66.23:2035,66,0	0/0:18,0:18:51.17:0,51,1062	0/0:24,0:24:66.15:0,66,1319	0/0:22,0:22:63.18:0,63,1244	0/0:26,0:26:69.24:0,69,1470	0/0:24,0:24:69.24:0,69,1471	0/0:28,0:28:81.28:0,81,1714	0/0:14,0:14:39.13:0,39,831	0/0:18,0:18:54.19:0,54,1150	0/0:30,0:30:87.30:0,87,1831	0/0:34,0:34:99:0,102,2174	0/0:4,0:4:12.04:0,12,253
chr10	1099881	.	GA	G	1878.65	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=4.793;DP=607;FS=7.728;HRun=6;HaplotypeScore=69.2092;InbreedingCoeff=0.9987;MQ=70.92;MQ0=1;MQRankSum=0.513;QD=26.09;ReadPosRankSum=0.395;VQSLOD=3.7826;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,34:36:96.24:1032,96,0	0/0:15,0:15:42.10:0,42,534	0/0:19,0:19:41.49:0,41,496	0/0:16,0:15:22.60:0,23,427	0/0:27,0:27:78.23:0,78,997	0/0:20,0:20:54.16:0,54,685	0/0:18,0:17:51.17:0,51,671	1/1:3,21:24:60.13:635,60,0	0/0:23,0:23:63.17:0,63,798	0/0:29,0:29:81.26:0,81,1053	0/0:27,0:27:72.23:0,72,945	0/0:17,0:17:48.16:0,48,631	0/0:24,0:24:60.20:0,60,789	0/0:18,0:18:54.18:0,54,710	0/0:31,0:31:84.27:0,84,1090	0/0:19,0:19:48.11:0,48,605	1/1:1,11:12:33.08:355,33,0	0/0:19,0:19:51.17:0,51,666	0/0:26,0:26:72.23:0,72,935	0/0:29,0:29:84.21:0,84,1058	0/0:20,0:20:51.15:0,51,656	0/0:17,0:17:45.15:0,45,591	0/0:16,0:16:42.12:0,42,538	0/0:27,0:27:78.25:0,78,1026	0/0:23,0:23:66.21:0,66,868	0/0:24,0:24:71.25:0,71,873	0/0:20,0:20:57.17:0,57,690	0/0:11,0:10:30.07:0,30,365
chr10	1099889	.	GAC	G	1750.52	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=5.481;DP=600;FS=1.980;HRun=0;HaplotypeScore=81.7974;InbreedingCoeff=0.9145;MQ=73.10;MQ0=1;MQRankSum=-0.510;QD=37.25;ReadPosRankSum=2.428;VQSLOD=5.9968;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:96.31:0,96,1651	0/0:13,0:13:39.13:0,39,714	0/0:19,0:20:56.77:0,57,919	0/0:18,0:17:0.77:0,1,753	0/0:26,0:26:78.27:0,78,1427	0/0:20,0:20:57.20:0,57,1043	0/0:18,0:17:51.16:0,51,904	0/0:27,0:27:78.26:0,78,1362	0/0:20,0:20:57.20:0,57,1030	0/0:31,0:31:93.32:0,93,1703	0/0:26,0:26:66.21:0,66,1178	0/0:19,0:19:57.20:0,57,1041	0/0:23,0:23:63.22:0,63,1146	0/0:21,0:21:60.21:0,60,1097	0/0:29,0:29:81.26:0,81,1447	0/0:20,0:20:54.19:0,54,986	0/0:13,0:13:36.12:0,36,640	0/0:18,0:18:45.15:0,45,825	0/0:27,0:27:78.26:0,78,1396	0/0:27,0:27:78.27:0,78,1409	0/0:19,0:19:54.17:0,54,941	0/0:16,0:16:45.15:0,45,812	0/0:18,0:18:51.17:0,51,930	0/0:27,0:27:75.21:0,75,1304	0/0:23,0:23:69.24:0,69,1264	1/1:0,23:23:69.23:988,69,0	1/1:1,16:17:48.16:687,48,0	1/1:2,5:6:15.05:215,15,0
chr10	1102764	.	TC	T	718.89	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.244;DP=617;FS=4.130;HRun=1;HaplotypeScore=65.6755;InbreedingCoeff=0.9982;MQ=62.96;MQ0=4;MQRankSum=0.665;QD=29.95;ReadPosRankSum=0.847;VQSLOD=3.3465;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:90.29:0,90,1403	0/0:10,0:10:30.02:0,30,426	0/0:18,0:14:39.13:0,39,602	0/0:27,0:21:28.69:0,29,742	0/0:26,0:25:75.21:0,75,1146	0/0:21,0:21:57.08:0,57,832	0/0:12,0:12:33.10:0,33,503	0/0:30,0:28:84.26:0,84,1258	0/0:23,0:23:57.19:0,57,908	0/0:15,0:15:45.13:0,45,660	0/0:19,0:18:54.17:0,54,838	0/0:16,0:16:42.14:0,42,668	0/0:24,0:24:69.20:0,69,1053	0/0:21,0:21:48.15:0,48,741	0/0:19,0:19:36.10:0,36,526	0/0:19,0:19:54.17:0,54,839	1/1:1,23:24:40.45:814,40,0	0/0:25,0:25:64.81:0,65,933	0/0:14,0:13:39.06:0,39,550	0/0:29,0:29:87.28:0,87,1365	0/0:20,0:20:51.17:0,51,814	0/0:21,0:21:60.08:0,60,927	0/0:28,0:28:84.26:0,84,1291	0/0:22,0:21:60.20:0,60,953	0/0:22,0:22:66.13:0,66,1001	0/0:34,0:34:99:0,102,1585	0/0:30,0:30:81.17:0,81,1181	0/0:17,0:17:51.17:0,51,810
chr10	1103765	.	GTAGT	G	1042.84	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=-2.883;DP=308;FS=15.089;HRun=0;HaplotypeScore=46.4758;InbreedingCoeff=0.6506;MQ=59.06;MQ0=0;MQRankSum=-3.451;QD=15.34;ReadPosRankSum=-0.447;VQSLOD=0.9488;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:16,0:16:99:184,0,164	0/0:9,0:9:24:0,24,338	0/0:12,0:11:16.37:0,16,230	0/0:4,0:4:11.96:0,12,95	0/0:15,0:15:41.94:0,42,419	0/0:6,0:6:18.02:0,18,287	0/0:4,0:4:11.98:0,12,99	1/1:30,0:30:86.90:752,87,0	0/0:7,0:7:7.16:0,7,112	0/0:8,0:8:24.02:0,24,219	0/0:11,0:11:32.95:0,33,325	0/0:7,0:7:20.97:0,21,227	0/0:10,0:10:26.99:0,27,389	0/0:6,0:6:17.99:0,18,222	0/0:5,0:5:14.99:0,15,180	0/0:15,0:15:45.03:0,45,684	1/1:4,18:22:12.04:232,12,0	0/0:4,0:4:11.94:0,12,204	0/0:28,0:28:68.10:0,68,700	0/0:17,0:17:50.95:0,51,658	0/0:8,0:8:20.99:0,21,285	0/0:9,0:9:20.96:0,21,170	0/0:3,0:3:7.81:0,8,54	0/0:6,0:6:8.97:0,9,71	0/0:11,0:11:33:0,33,445	0/0:8,0:8:24.02:0,24,321	0/0:16,0:16:47.85:0,48,599	0/0:11,0:11:32.96:0,33,514
chr10	1104616	.	TA	T	2282.34	PASS	AB=0.826;AC=15;AF=0.268;AN=56;BaseQRankSum=7.845;DP=538;FS=2.224;HRun=12;HaplotypeScore=62.2359;InbreedingCoeff=0.7243;MQ=58.89;MQ0=1;MQRankSum=-0.094;QD=12.47;ReadPosRankSum=1.869;VQSLOD=3.7477;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,12:21:22.32:340,22,0	0/0:4,0:5:14.86:0,15,136	0/0:14,0:8:9.08:0,9,154	0/0:6,0:4:10.80:0,11,84	0/0:30,1:31:70.60:0,71,667	0/0:23,0:23:58.35:0,58,576	0/1:8,3:11:42.66:43,0,156	1/1:5,24:28:66.96:495,67,0	1/1:0,14:14:29.89:232,30,0	0/0:21,1:23:30.66:0,31,462	0/0:14,0:15:34.13:0,34,311	0/0:15,0:15:42.07:0,42,421	0/1:14,5:19:64.93:65,0,305	0/1:8,1:8:5.08:5,0,134	0/0:16,1:17:15.82:0,16,327	0/0:19,1:21:27.68:0,28,437	0/0:27,1:28:45.90:0,46,647	0/0:17,0:18:37.71:0,38,404	0/0:16,0:16:32.60:0,33,323	0/0:27,1:28:54.38:0,54,682	0/0:19,1:20:33.84:0,34,508	0/0:13,0:13:27.52:0,28,275	0/0:24,2:26:35.91:0,36,525	0/0:8,0:9:20.86:0,21,191	0/0:26,1:27:29.24:0,29,517	1/1:8,20:28:59.72:463,60,0	1/1:6,23:30:37.56:461,38,0	1/1:2,19:21:47.10:370,47,0
chr10	1110182	.	C	CT	526.94	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-5.734;DP=495;FS=7.269;HRun=9;HaplotypeScore=49.3838;InbreedingCoeff=0.8975;MQ=75.88;MQ0=0;MQRankSum=0.138;QD=18.17;ReadPosRankSum=-4.336;VQSLOD=2.0901;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:50.04:0,50,432	0/0:10,0:10:29.99:0,30,260	0/0:10,0:10:19.81:0,20,162	0/0:11,1:11:10.75:0,11,149	0/0:28,1:29:41.81:0,42,592	0/0:28,0:28:38.85:0,39,558	0/0:12,0:12:29.98:0,30,260	1/1:8,21:29:57.14:622,57,0	0/0:16,0:16:47.94:0,48,407	0/0:24,0:24:65.99:0,66,573	0/0:24,0:25:68:0,68,575	0/0:15,0:15:38.98:0,39,339	0/0:22,0:22:56.96:0,57,491	0/0:14,0:14:41.99:0,42,365	0/0:10,0:10:26.99:0,27,234	0/0:18,0:18:41.96:0,42,361	0/0:26,0:25:65.98:0,66,573	0/0:8,0:8:24:0,24,208	0/0:24,0:24:56.97:0,57,492	0/0:21,0:21:53.99:0,54,469	0/0:5,0:5:12:0,12,104	0/0:14,0:14:29.97:0,30,260	0/0:5,0:5:12:0,12,104	0/0:10,0:10:26.99:0,27,234	0/0:19,0:19:47.95:0,48,412	0/0:25,0:25:71.98:0,72,625	0/0:30,0:30:80.97:0,81,703	0/0:13,0:13:35.94:0,36,305
chr10	1110815	.	T	TG	1249.08	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.046;DP=642;FS=0.674;HRun=3;HaplotypeScore=65.5672;InbreedingCoeff=0.9782;MQ=82.33;MQ0=0;MQRankSum=-2.591;QD=39.03;ReadPosRankSum=0.041;VQSLOD=3.6610;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,147,1761	0/0:9,0:9:21.05:0,21,240	0/0:18,0:18:48.12:0,48,544	0/0:18,0:18:51.06:0,51,578	0/0:13,0:13:36.11:0,36,432	0/0:10,0:10:24.07:0,24,288	0/0:27,0:27:81.21:0,81,939	0/0:17,0:17:51.15:0,51,602	0/0:21,0:21:54.15:0,54,636	0/0:30,0:30:75.19:0,75,900	0/0:18,0:18:36.11:0,36,431	0/0:22,0:22:63.19:0,63,756	0/0:20,0:20:57.17:0,57,684	0/0:25,0:25:72.22:0,72,863	0/0:31,0:31:93.27:0,93,1103	0/0:25,0:25:66.20:0,66,791	1/1:0,32:32:96.32:1344,96,0	0/0:26,0:26:72.22:0,72,864	0/0:29,0:29:81.23:0,81,949	0/0:21,0:21:57.16:0,57,667	0/0:48,0:48:99:0,129,1521	0/0:13,0:13:36.11:0,36,431	0/0:18,0:18:48:0,48,543	0/0:26,0:25:72.22:0,72,864	0/0:20,0:20:51.16:0,51,612	0/0:26,0:26:69.21:0,69,827	0/0:18,0:18:54.17:0,54,647	0/0:7,0:7:15.04:0,15,180
chr10	1110994	.	GGGGTGTGT	G	1479.03	PASS	AB=0.992;AC=9;AF=0.161;AN=56;BaseQRankSum=-2.214;DP=583;FS=0.467;HRun=0;HaplotypeScore=151.3555;InbreedingCoeff=0.3344;MQ=67.72;MQ0=10;MQRankSum=-0.812;QD=9.79;ReadPosRankSum=-0.319;VQSLOD=2.6968;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:25,5:30:18.83:768,19,0	0/0:8,0:8:21.05:0,21,447	0/0:28,0:16:32.62:0,33,466	0/0:25,0:15:35.66:0,36,576	0/0:16,0:16:38.37:0,38,799	0/0:19,0:19:54.09:0,54,1503	0/0:29,0:30:84.09:0,84,1652	1/1:20,0:23:52.15:502,52,0	0/1:24,0:25:52.84:53,0,1303	0/0:18,0:18:54.14:0,54,1336	0/0:12,0:12:30:0,30,828	0/0:19,0:19:57.15:0,57,1692	0/0:13,0:13:31.61:0,32,783	0/0:23,0:23:65.96:0,66,1946	0/0:26,0:26:71.86:0,72,2081	0/0:17,0:17:51.05:0,51,1605	0/1:31,0:31:99:113,0,1618	0/0:14,0:14:42.09:0,42,1424	0/0:18,0:18:53.07:0,53,764	0/0:9,0:9:27.04:0,27,698	0/0:59,0:57:99:0,165,3595	0/0:11,0:11:23.94:0,24,361	0/0:18,0:18:48.11:0,48,1367	0/0:33,0:32:75.12:0,75,2143	0/0:16,0:16:42.09:0,42,1116	0/1:17,0:16:51.76:52,0,516	0/1:16,0:16:58.58:59,0,358	0/1:9,0:9:84.79:85,0,132
chr10	1110996	.	GGT	G	248.60	PASS	AB=0.908;AC=14;AF=0.250;AN=56;BaseQRankSum=4.318;DP=600;FS=3.414;HRun=0;HaplotypeScore=91.5748;InbreedingCoeff=-0.1563;MQ=64.15;MQ0=13;MQRankSum=-0.422;QD=0.88;ReadPosRankSum=-0.795;VQSLOD=1.7759;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:27:7.68:58,0,8	0/1:5,2:7:46.56:56,0,47	0/0:27,0:14:3.47:0,3,28	0/0:27,1:16:8.98:0,9,85	0/1:16,2:18:74.05:74,0,98	0/1:18,2:20:6.89:7,0,292	0/0:29,0:29:12.85:0,13,297	1/1:20,0:20:10.36:47,10,0	0/0:27,0:27:35.42:0,35,636	0/1:16,3:19:71.65:72,0,229	0/0:11,0:11:15.04:0,15,208	0/1:18,0:19:14.95:15,0,357	0/0:12,0:12:12.48:0,12,160	0/1:20,2:22:8.66:9,0,507	0/1:22,2:25:5.85:6,0,507	0/1:17,0:17:3.71:4,0,381	0/0:23,0:32:39.55:0,40,524	0/0:16,0:15:23.75:0,24,329	0/0:18,0:18:7.73:0,8,76	0/0:10,0:10:12.01:0,12,141	0/1:59,1:58:8.65:9,0,703	0/1:10,2:12:18.93:28,0,19	0/0:17,0:18:2.58:0,3,295	0/0:27,7:33:11.14:0,11,524	0/1:13,3:16:12.89:13,0,232	0/0:26,0:25:45.19:0,45,334	0/0:19,0:17:11.61:0,12,104	0/0:9,0:9:3.01:0,3,36
chr10	1111696	.	T	TGA	4134.57	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=12.169;DP=616;FS=7.769;HRun=0;HaplotypeScore=75.3110;InbreedingCoeff=0.9975;MQ=82.55;MQ0=0;MQRankSum=-5.975;QD=49.81;ReadPosRankSum=-1.682;VQSLOD=3.6607;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,27:28:72.25:1347,72,0	0/0:7,0:7:21.07:0,21,343	0/0:18,0:18:51.15:0,51,749	0/0:17,0:17:45.15:0,45,724	0/0:24,0:24:72.25:0,72,1174	0/0:25,0:25:72.21:0,72,1101	0/0:17,0:17:48.16:0,48,778	1/1:1,39:41:99:2167,120,0	0/0:27,0:27:81.24:0,81,1250	0/0:26,0:26:75.24:0,75,1200	0/0:24,0:24:72.23:0,72,1150	0/0:25,0:25:75.25:0,75,1204	0/0:17,0:17:51.17:0,51,832	0/0:23,0:23:66.20:0,66,1030	0/0:25,0:25:72.24:0,72,1142	0/0:13,0:13:39.11:0,39,584	1/1:1,13:14:33.11:621,33,0	0/0:22,0:22:66.23:0,66,1076	0/0:18,0:18:40.40:0,40,818	0/0:27,0:27:81.24:0,81,1251	0/0:26,0:26:78.27:0,78,1272	0/0:22,0:22:66.23:0,66,1076	0/0:17,0:17:51.14:0,51,763	0/0:10,0:10:30.09:0,30,467	0/0:29,0:29:87.29:0,87,1391	0/0:25,0:25:69.21:0,69,1079	0/0:41,0:40:99:0,123,2006	0/0:8,0:8:24.08:0,24,391
chr10	1112300	.	ACT	A	828.95	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.700;DP=841;FS=4.121;HRun=0;HaplotypeScore=99.8969;InbreedingCoeff=0.9990;MQ=84.15;MQ0=0;MQRankSum=-1.847;QD=36.04;ReadPosRankSum=0.621;VQSLOD=5.4906;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,117,2002	0/0:16,0:16:48.15:0,48,834	0/0:29,0:29:87.30:0,87,1537	0/0:22,0:22:66.11:0,66,1081	0/0:32,0:32:96.31:0,96,1695	0/0:32,0:32:87.30:0,87,1559	0/0:26,0:26:72.25:0,72,1297	0/0:39,0:38:93.31:0,93,1630	1/1:0,23:23:66.22:924,66,0	0/0:38,0:38:99:0,108,1881	0/0:25,0:25:66.19:0,66,1119	0/0:37,0:37:99:0,105,1861	0/0:41,0:41:99:0,111,1964	0/0:44,0:44:99:0,123,2142	0/0:34,0:34:99:0,99,1743	0/0:36,0:36:99:0,105,1860	0/0:35,0:35:99:0,105,1886	0/0:21,0:21:63.22:0,63,1125	0/0:15,0:15:30.09:0,30,513	0/0:39,0:39:99:0,114,2045	0/0:31,0:31:84.29:0,84,1513	0/0:30,0:30:87.28:0,87,1519	0/0:25,0:25:72.25:0,72,1291	0/0:28,0:28:81.28:0,81,1440	0/0:21,0:21:63.22:0,63,1134	0/0:41,0:41:99:0,114,2000	0/0:31,0:31:90.31:0,90,1620	0/0:10,0:10:30.10:0,30,540
chr10	1114297	.	C	CTAGT	1605.48	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-7.281;DP=806;FS=0.000;HRun=0;HaplotypeScore=130.2208;InbreedingCoeff=0.9959;MQ=84.39;MQ0=0;MQRankSum=-3.132;QD=57.34;ReadPosRankSum=2.149;VQSLOD=5.2562;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,126,2255	0/0:8,0:8:21.07:0,21,392	0/0:27,0:27:63.19:0,63,1112	0/0:32,0:32:77.21:0,77,1300	0/0:38,0:38:99:0,102,1863	0/0:26,0:26:78.25:0,78,1414	0/0:26,0:26:72.23:0,72,1312	0/0:28,0:28:78.71:0,79,1336	0/0:38,0:38:99:0,108,1995	0/0:36,0:36:93.30:0,93,1675	0/0:25,0:25:60.21:0,60,1119	0/0:24,0:24:66.21:0,66,1200	0/0:40,0:40:99:0,114,2084	0/0:31,0:31:90.27:0,90,1578	0/0:44,0:44:99:0,126,2313	0/0:26,0:26:75.26:0,75,1386	1/1:2,25:28:66.19:1700,66,0	0/0:20,0:20:60.17:0,60,1078	0/0:24,0:24:69.24:0,69,1283	0/0:51,0:51:99:0,132,2392	0/0:31,0:31:90.27:0,90,1586	0/0:25,0:25:72.23:0,72,1312	0/0:23,0:23:66.18:0,66,1136	0/0:19,0:19:57.18:0,57,1023	0/0:16,0:16:48.15:0,48,864	0/0:29,0:29:79.48:0,79,1338	0/0:33,0:32:96.28:0,96,1697	0/0:14,0:14:39.12:0,39,695
chr10	1116165	.	A	AGGTG	1088.79	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=8.914;DP=789;FS=2.086;HRun=0;HaplotypeScore=139.5924;InbreedingCoeff=0.7507;MQ=53.51;MQ0=16;MQRankSum=-0.265;QD=11.11;ReadPosRankSum=-0.964;VQSLOD=3.1593;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:27:45.65:0,46,783	0/0:13,0:13:39.09:0,39,680	0/0:30,0:9:27.09:0,27,502	0/0:28,0:14:41.67:0,42,653	0/0:19,0:19:51.10:0,51,778	0/0:22,0:22:60.13:0,60,910	0/0:24,0:21:60.13:0,60,919	0/0:34,0:29:77.93:0,78,1079	0/1:32,0:38:99:144,0,820	0/0:38,0:35:93.26:0,93,1462	0/0:16,0:16:45.09:0,45,685	0/0:35,0:35:99:0,99,1441	0/0:39,0:39:99:0,103,1642	0/0:40,0:40:99:0,111,1709	0/0:49,0:49:99:0,147,2578	0/0:34,0:34:99:0,102,1788	0/0:8,0:7:14.59:0,15,143	0/0:22,0:22:66.23:0,66,1193	0/0:16,0:6:18.06:0,18,327	0/0:16,0:16:38.73:0,39,638	0/0:73,0:67:99:0,180,3149	0/0:24,0:23:59.93:0,60,944	0/0:13,0:13:39.11:0,39,657	0/0:45,0:45:99:0,128,2105	0/0:24,0:24:72.25:0,72,1310	1/1:9,19:28:3.94:593,4,0	1/1:2,19:22:20.05:262,20,0	1/1:2,6:7:9.03:224,9,0
chr10	1116175	.	GTGGATGGA	G	416.42	PASS	AC=2;AF=0.038;AN=52;BaseQRankSum=4.595;DP=769;FS=15.703;HRun=0;HaplotypeScore=191.8796;InbreedingCoeff=0.8174;MQ=54.42;MQ0=11;MQRankSum=-5.178;QD=16.66;ReadPosRankSum=0.999;VQSLOD=1.6096;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,13:25:21.07:508,21,0	0/0:14,0:14:21.04:0,21,615	./.	./.	0/0:17,0:17:33.11:0,33,1258	0/0:19,0:19:42.14:0,42,1524	0/0:22,0:21:39.13:0,39,1510	0/0:28,0:24:9.03:0,9,185	0/0:41,0:41:58.31:0,58,1583	0/0:34,0:33:69.19:0,69,2409	0/0:17,0:17:36.10:0,36,1246	0/0:31,0:31:75.24:0,75,2692	0/0:40,0:40:75.26:0,75,2803	0/0:38,0:38:72.25:0,72,2415	0/0:50,0:50:90.30:0,90,3291	0/0:35,0:35:75.26:0,75,2752	0/0:8,0:7:9.03:0,9,273	0/0:29,0:29:42.07:0,42,1240	0/0:12,0:8:12.04:0,12,364	0/0:15,0:15:27.56:0,28,1021	0/0:65,0:64:99:0,111,4123	0/0:25,0:24:51.18:0,51,1929	0/0:16,0:16:42.14:0,42,1467	0/0:45,0:45:93.15:0,93,3343	0/0:24,0:24:54.19:0,54,2049	0/0:25,0:25:41.16:0,41,1095	0/0:25,0:24:21.06:0,21,552	0/0:7,0:7:9.03:0,9,328
chr10	1122901	.	G	GTGTCTCTTAAAGAAAT	2028.11	PASS	AB=0.800;AC=19;AF=0.950;AN=20;BaseQRankSum=-1.734;DP=24;FS=4.559;HRun=0;HaplotypeScore=26.3483;InbreedingCoeff=-0.1972;MQ=175.71;MQ0=0;MQRankSum=-0.173;QD=101.41;ReadPosRankSum=-0.173;VQSLOD=2.6040;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	./.	1/1:2,1:7:21.07:1308,21,0	0/1:3,0:4:7.30:494,0,7	./.	1/1:1,0:1:2.99:24,3,0	./.	1/1:2,0:2:5.98:64,6,0	./.	./.	1/1:1,0:1:3.01:43,3,0	1/1:1,0:1:3.01:56,3,0	1/1:1,0:1:2.98:22,3,0	1/1:1,0:1:3:25,3,0	./.	./.	1/1:1,0:1:3.01:42,3,0	./.	./.	./.	1/1:1,0:1:2.99:24,3,0	./.	./.	./.	./.	./.	./.	./.
chr10	1124663	.	A	AT	15359.14	PASS	AC=52;AF=1.000;AN=52;BaseQRankSum=-1.732;DP=385;FS=0.000;HRun=1;HaplotypeScore=316.0139;InbreedingCoeff=-0.0079;MQ=31.61;MQ0=0;MQRankSum=-1.615;QD=40.00;ReadPosRankSum=1.507;VQSLOD=3.6277;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,16:19:51.13:735,51,0	1/1:2,11:13:36.12:537,36,0	./.	./.	1/1:3,18:21:45.15:669,45,0	1/1:2,18:19:54.18:807,54,0	1/1:3,8:11:27.09:401,27,0	1/1:2,17:19:52.73:764,53,0	1/1:2,9:11:30.10:448,30,0	1/1:7,15:22:63.17:894,63,0	1/1:3,5:8:24:308,24,0	1/1:3,17:20:57.19:850,57,0	1/1:2,15:17:51.17:761,51,0	1/1:5,15:19:57.15:800,57,0	1/1:3,21:24:69.23:1029,69,0	1/1:4,18:22:63.18:916,63,0	1/1:2,9:11:32.98:418,33,0	1/1:2,12:14:33.08:531,33,0	1/1:1,7:8:24.08:352,24,0	1/1:3,9:12:30.10:447,30,0	1/1:0,4:4:12.04:178,12,0	1/1:2,10:12:36.12:537,36,0	1/1:2,8:10:27.09:401,27,0	1/1:0,12:12:21.54:314,22,0	1/1:4,17:21:60.16:869,60,0	1/1:3,8:11:33.07:456,33,0	1/1:2,18:20:60.20:892,60,0	1/1:0,1:1:3.01:45,3,0
chr10	1124665	.	G	GA	4540.50	PASS	AC=52;AF=1.000;AN=52;DP=322;FS=0.000;HRun=1;HaplotypeScore=305.2863;InbreedingCoeff=0.0395;MQ=32.12;MQ0=0;QD=14.14;VQSLOD=4.0596;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,16:16:45.22:220,45,0	1/1:0,11:11:31.54:164,32,0	./.	./.	1/1:2,16:18:42.02:207,42,0	1/1:1,17:17:47.74:230,48,0	1/1:0,8:8:19.60:92,20,0	1/1:0,17:17:47.39:331,47,0	1/1:0,9:9:25.63:125,26,0	1/1:0,15:15:39.86:254,40,0	1/1:0,5:5:13.91:64,14,0	1/1:0,17:17:48.40:239,48,0	1/1:0,15:15:42.41:207,42,0	1/1:1,15:15:39.29:188,39,0	1/1:0,21:21:59.74:293,60,0	1/1:0,18:18:50.82:252,51,0	1/1:0,9:9:25.46:124,25,0	1/1:0,12:12:34.12:200,34,0	1/1:0,7:8:23.70:161,24,0	1/1:0,9:9:25.46:123,25,0	1/1:0,4:4:11.11:52,11,0	1/1:0,10:10:28.33:138,28,0	1/1:0,8:8:22.56:109,23,0	1/1:0,12:12:20.07:94,20,0	1/1:1,16:17:48.52:243,49,0	1/1:0,8:8:23.16:135,23,0	1/1:0,19:18:53.95:279,54,0	1/1:0,1:1:2.92:17,3,0
chr10	1124734	.	A	AT	8545.33	PASS	AB=0.838;AC=54;AF=0.964;AN=56;BaseQRankSum=-0.107;DP=413;FS=2.151;HRun=4;HaplotypeScore=237.3193;InbreedingCoeff=-0.0378;MQ=44.68;MQ0=0;MQRankSum=-2.315;QD=20.69;ReadPosRankSum=1.288;VQSLOD=3.0331;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,9:11:22.58:175,23,0	1/1:1,5:6:14.85:120,15,0	0/1:3,1:4:17.40:33,0,17	0/1:6,1:7:4.42:53,0,4	1/1:4,13:17:38.90:424,39,0	1/1:0,17:17:49.73:366,50,0	1/1:3,14:17:44.47:366,44,0	1/1:6,17:23:59.84:580,60,0	1/1:2,18:20:53.49:417,53,0	1/1:2,9:11:29.94:245,30,0	1/1:2,10:12:25.30:217,25,0	1/1:2,10:12:32.51:212,33,0	1/1:4,18:22:56.45:426,56,0	1/1:5,15:20:50.20:368,50,0	1/1:6,24:30:80.05:608,80,0	1/1:3,16:19:50.60:410,51,0	1/1:5,8:13:20.75:163,21,0	1/1:2,10:12:26.70:195,27,0	1/1:6,18:24:56.77:509,57,0	1/1:4,11:15:41.65:358,42,0	1/1:3,4:7:11.98:121,12,0	1/1:1,2:3:8.98:86,9,0	1/1:1,7:8:23.97:269,24,0	1/1:2,7:9:20.49:144,20,0	1/1:2,16:18:50.67:443,51,0	1/1:3,17:20:47.01:459,47,0	1/1:6,27:33:86.44:691,86,0	1/1:0,3:3:9:89,9,0
chr10	1129587	.	TA	T	846.95	PASS	AB=0.815;AC=9;AF=0.161;AN=56;BaseQRankSum=4.465;DP=564;FS=0.000;HRun=13;HaplotypeScore=60.9229;InbreedingCoeff=0.8273;MQ=65.50;MQ0=2;MQRankSum=-0.671;QD=9.52;ReadPosRankSum=1.759;VQSLOD=2.8283;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,15:17:14.72:238,15,0	0/0:13,0:13:30.05:0,30,291	0/0:18,0:9:14.14:0,14,103	0/0:12,0:7:5.98:0,6,50	0/0:27,1:29:41.01:0,41,535	0/0:19,0:22:58.36:0,58,500	0/0:14,0:14:36.04:0,36,344	0/0:27,1:28:44.16:0,44,574	0/0:18,0:19:10.36:0,10,281	0/0:18,1:19:20.16:0,20,358	0/0:24,1:25:38.11:0,38,521	0/0:16,0:17:41.90:0,42,394	0/0:21,0:21:41.93:0,42,420	0/0:29,0:30:50.22:0,50,620	0/0:19,0:22:44.82:0,45,405	0/0:15,1:16:23.16:0,23,387	1/1:3,15:19:23.31:289,23,0	1/1:1,17:20:48.82:340,49,0	0/0:23,0:27:21.71:0,22,392	0/0:26,0:28:65.90:0,66,614	1/1:3,8:11:17.89:131,18,0	0/0:12,0:13:20.87:0,21,189	0/0:17,0:17:38.63:0,39,342	0/0:17,0:17:45.04:0,45,426	0/1:15,5:22:8.98:9,0,372	0/0:10,1:28:43.08:0,43,406	0/0:4,0:29:54.30:0,54,299	0/0:8,0:9:14.33:0,14,97
chr10	1132220	.	T	TA	772.92	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-6.705;DP=667;FS=5.463;HRun=6;HaplotypeScore=61.9724;InbreedingCoeff=0.9985;MQ=84.01;MQ0=0;MQRankSum=-3.271;QD=28.63;ReadPosRankSum=0.703;VQSLOD=4.3694;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,105,1071	0/0:12,0:12:33.07:0,33,337	0/0:20,0:20:47.42:0,47,453	0/0:24,0:24:55.36:0,55,494	0/0:39,0:39:99:0,114,1156	0/0:15,0:15:45.10:0,45,459	0/0:16,0:16:42.09:0,42,428	0/0:37,0:37:99:0,105,1057	0/0:29,0:29:78.17:0,78,796	0/0:30,0:30:75.17:0,75,765	0/0:14,0:14:39.09:0,39,398	0/0:23,0:23:66.15:0,66,673	0/0:18,0:18:54.12:0,54,551	0/0:21,0:21:60.12:0,60,606	0/0:24,0:24:69.14:0,69,697	0/0:27,0:26:72.16:0,72,735	1/1:3,24:27:69.22:868,69,0	0/0:20,0:20:54.08:0,54,540	0/0:16,0:16:42.10:0,42,429	0/0:24,0:24:69.15:0,69,700	0/0:24,0:24:66.14:0,66,673	0/0:26,0:26:63.14:0,63,643	0/0:24,0:24:69.16:0,69,704	0/0:13,0:13:39.04:0,39,376	0/0:29,0:29:84.19:0,84,857	0/0:28,0:28:81.18:0,81,827	0/0:41,0:41:99:0,105,1053	0/0:9,0:9:27.06:0,27,275
chr10	1134600	.	GAACAAC	G	2107.92	PASS	AB=0.583;AC=5;AF=0.089;AN=56;BaseQRankSum=8.958;DP=598;FS=0.000;HRun=0;HaplotypeScore=120.5352;InbreedingCoeff=0.7438;MQ=55.32;MQ0=14;MQRankSum=-7.975;QD=39.04;ReadPosRankSum=1.203;VQSLOD=3.4803;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:75.26:0,75,2411	0/0:10,0:10:18.06:0,18,568	0/0:19,0:5:15.01:0,15,378	0/0:17,0:6:18.06:0,18,534	0/0:23,0:23:51.18:0,51,1686	0/0:16,0:16:48.16:0,48,1504	0/0:23,0:23:51.18:0,51,1586	0/0:26,0:26:46.40:0,46,1352	0/0:25,0:25:63.19:0,63,1803	0/0:27,0:27:78.12:0,78,2286	0/0:17,0:17:39.58:0,40,1148	0/0:24,0:24:63.22:0,63,2012	0/0:25,0:25:57.14:0,57,1680	0/0:24,0:24:57.20:0,57,1817	0/0:25,0:25:60.18:0,60,1915	0/0:15,0:15:39.10:0,39,1093	0/0:8,0:7:12.04:0,12,191	0/0:20,0:20:51.18:0,51,1691	0/0:20,0:20:36.22:0,36,1302	0/0:26,0:25:69.20:0,69,2108	0/0:24,0:25:72.18:0,72,2222	0/0:33,0:33:63.06:0,63,1981	0/0:23,0:23:66.19:0,66,1941	0/0:19,0:19:45.13:0,45,1386	0/0:21,0:21:48.04:0,48,1373	0/1:6,15:21:48.49:848,0,48	1/1:7,20:27:54.19:1131,54,0	1/1:1,5:6:12.04:255,12,0
chr10	1134690	.	T	TCTCTCC	1684.77	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=6.892;DP=631;FS=7.325;HRun=0;HaplotypeScore=146.4450;InbreedingCoeff=0.3252;MQ=67.77;MQ0=21;MQRankSum=-4.189;QD=9.41;ReadPosRankSum=-1.995;VQSLOD=1.4920;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:32,0:32:99:348,0,110	0/0:9,0:9:23.09:0,23,401	0/1:44,0:21:15.87:16,0,573	0/0:64,0:29:24.28:0,24,490	0/0:18,0:18:45.15:0,45,865	0/0:19,0:19:48.06:0,48,815	0/0:25,0:25:72.24:0,72,1407	1/1:18,0:17:22.94:366,23,0	0/1:24,0:24:99:212,0,113	0/0:17,0:17:48.16:0,48,1008	0/0:9,0:9:21.07:0,21,440	0/0:28,0:28:72.20:0,72,1482	0/0:19,0:19:57.19:0,57,1184	0/0:22,0:22:60.19:0,60,1193	0/0:21,0:21:57.20:0,57,1190	0/0:21,0:21:57.19:0,57,1171	1/1:0,15:16:18.06:605,18,0	0/0:24,0:24:69.24:0,69,1381	0/0:24,0:21:55.38:0,55,968	0/0:19,0:19:45.15:0,45,963	0/0:35,0:35:99:0,99,1951	0/0:15,0:15:42.14:0,42,919	0/0:19,0:19:48.16:0,48,1033	0/0:17,0:17:48.16:0,48,980	0/0:19,0:19:54.14:0,54,1085	0/1:27,0:27:91.74:260,0,92	0/1:18,0:18:28.99:29,0,135	0/0:4,0:4:8.10:0,8,34
chr10	1135041	.	T	TA	876.51	PASS	AB=0.894;AC=12;AF=0.214;AN=56;BaseQRankSum=-5.381;DP=649;FS=10.299;HRun=15;HaplotypeScore=90.8460;InbreedingCoeff=0.1240;MQ=72.61;MQ0=0;MQRankSum=-0.022;QD=4.15;ReadPosRankSum=-3.456;VQSLOD=-0.1593;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,31:42:23.91:383,24,0	0/1:3,1:4:15.04:15,0,29	0/1:19,0:14:9.98:10,0,17	0/0:14,0:14:11.26:0,11,41	0/0:28,0:29:11.75:0,12,175	0/0:17,7:24:16.02:0,16,208	0/0:12,1:14:20.35:0,20,124	1/1:11,15:30:53.33:404,53,0	0/0:22,0:25:36.23:0,36,208	0/0:19,0:20:28.07:0,28,163	0/0:13,0:13:17.34:0,17,107	0/0:29,0:29:31.81:0,32,195	0/0:28,6:34:0.30:0,0,204	0/1:21,4:25:29.69:30,0,169	0/0:32,1:34:37.32:0,37,327	0/0:28,0:29:54.67:0,55,328	0/0:6,0:32:45.23:0,45,131	0/0:15,0:17:34.31:0,34,202	0/0:27,1:28:6.62:0,7,147	0/1:18,5:26:99:103,0,105	0/1:14,1:17:5.87:6,0,75	0/1:10,1:11:12.02:20,0,12	0/1:10,0:14:3.22:3,0,57	0/0:23,2:25:12.83:0,13,187	0/1:16,5:22:57.57:58,0,140	0/0:32,1:33:20.67:0,21,230	0/0:26,1:28:5.69:0,6,142	0/0:10,0:10:4.56:0,5,91
chr10	1135252	.	T	TA	1653.84	PASS	AB=0.963;AC=13;AF=0.232;AN=56;BaseQRankSum=-6.099;DP=526;FS=9.783;HRun=10;HaplotypeScore=55.2418;InbreedingCoeff=0.7274;MQ=64.71;MQ0=11;MQRankSum=0.884;QD=12.07;ReadPosRankSum=0.553;VQSLOD=2.1193;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,17:24:17.10:433,17,0	0/0:8,0:8:23.97:0,24,197	0/1:25,0:9:19.33:19,0,67	0/1:16,0:4:1.43:1,0,17	0/0:38,0:37:86.33:0,86,704	0/0:26,1:27:30.91:0,31,461	0/0:7,0:7:17.95:0,18,144	0/0:24,0:23:40.95:0,41,326	1/1:4,8:14:35.90:352,36,0	0/0:18,0:18:32.94:0,33,269	0/0:20,0:20:47.92:0,48,394	0/0:18,0:18:32.93:0,33,271	0/0:19,0:19:35.92:0,36,296	0/0:27,0:27:62.87:0,63,516	0/0:20,0:20:47.92:0,48,394	0/0:24,0:24:62.92:0,63,517	0/0:19,0:19:50.93:0,51,419	0/0:18,0:18:41.43:0,41,328	0/0:27,1:24:59.92:0,60,490	0/0:23,1:24:24.92:0,25,411	0/1:7,1:8:35.62:36,0,80	0/0:7,0:7:14.98:0,15,123	0/0:13,0:13:24.82:0,25,218	0/0:11,0:11:20.97:0,21,172	0/0:17,0:17:44.92:0,45,369	1/1:6,16:22:20.47:423,20,0	1/1:5,13:18:30.08:320,30,0	1/1:1,7:8:24.05:250,24,0
chr10	1136634	.	G	GAAA	4487.35	PASS	AB=0.776;AC=14;AF=0.250;AN=56;BaseQRankSum=0.253;DP=755;FS=0.000;HRun=11;HaplotypeScore=109.6879;InbreedingCoeff=0.8402;MQ=64.83;MQ0=2;MQRankSum=-3.527;QD=20.03;ReadPosRankSum=-3.303;VQSLOD=2.7653;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:60:68.53:507,69,0	0/0:14,0:14:39.08:0,39,444	0/0:13,0:15:25.97:0,26,234	0/1:2,0:2:5.97:6,0,29	0/0:25,0:26:69.07:0,69,789	0/0:22,0:22:47.97:0,48,550	0/0:29,0:29:69.10:0,69,806	1/1:9,0:24:43.95:345,44,0	0/1:5,18:26:2:464,0,2	0/0:29,0:33:69.59:0,70,795	0/0:18,0:20:43.55:0,44,505	0/0:31,0:32:77.98:0,78,894	0/0:35,0:37:67.50:0,68,792	0/0:41,0:41:61.51:0,62,940	0/0:33,0:33:68.95:0,69,780	0/0:37,0:37:84.13:0,84,980	1/1:7,25:35:66.15:1154,66,0	0/0:19,0:19:39.05:0,39,456	0/0:18,0:18:42.07:0,42,473	0/0:19,0:19:48.07:0,48,550	0/0:22,0:23:52.39:0,52,593	0/0:23,0:23:63.12:0,63,726	0/0:31,0:33:73.60:0,74,840	0/0:31,0:33:83.98:0,84,947	0/0:22,0:23:41.88:0,42,452	1/1:9,18:34:49.02:1107,49,0	1/1:9,20:33:50.63:856,51,0	1/1:2,0:6:4.56:47,5,0
chr10	1139542	.	TAG	T	1265.57	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.156;DP=560;FS=7.633;HRun=0;HaplotypeScore=79.4878;InbreedingCoeff=0.9953;MQ=78.75;MQ0=0;MQRankSum=-3.214;QD=38.35;ReadPosRankSum=1.584;VQSLOD=5.8011;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,104,718	0/0:9,0:9:27.09:0,27,526	0/0:15,0:15:38.95:0,39,546	0/0:17,0:16:44.94:0,45,678	0/0:19,0:19:57.18:0,57,1084	0/0:16,0:16:45.15:0,45,900	0/0:8,0:8:24.06:0,24,401	0/0:25,0:25:59.93:0,60,438	0/0:25,0:25:62.41:0,62,442	0/0:24,0:24:66.21:0,66,1251	0/0:18,0:18:54.15:0,54,1004	0/0:19,0:19:57.15:0,57,1044	0/0:22,0:22:66.22:0,66,1274	0/0:21,0:21:63.19:0,63,1178	0/0:19,0:18:57.10:0,57,960	0/0:28,0:28:84.27:0,84,1639	1/1:0,33:33:84.29:1360,84,0	0/0:21,0:21:62.99:0,63,1058	0/0:12,0:12:36.06:0,36,584	0/0:17,0:17:51.15:0,51,960	0/0:12,0:12:36.11:0,36,666	0/0:9,0:9:27.09:0,27,545	0/0:21,0:21:63.17:0,63,1199	0/0:23,0:23:69.22:0,69,1359	0/0:19,0:19:56.86:0,57,1103	0/0:29,0:29:86.26:0,86,728	0/0:31,0:31:80.10:0,80,559	0/0:12,0:12:32.63:0,33,221
chr10	1139543	.	AG	A	3457.57	PASS	AB=0.558;AC=13;AF=0.232;AN=56;BaseQRankSum=11.799;DP=558;FS=0.358;HRun=9;HaplotypeScore=59.9628;InbreedingCoeff=0.8968;MQ=78.81;MQ0=0;MQRankSum=-0.782;QD=18.49;ReadPosRankSum=1.705;VQSLOD=3.9412;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,32:36:93.05:851,93,0	0/0:8,0:9:26.91:0,27,291	0/0:13,0:15:23.07:0,23,194	0/0:17,0:16:34.92:0,35,354	0/0:19,0:19:54.12:0,54,607	0/0:17,0:17:48.13:0,48,543	0/0:8,0:8:18.05:0,18,208	1/1:5,20:25:50.98:459,51,0	1/1:3,21:24:51.02:467,51,0	0/0:24,0:24:60.17:0,60,683	0/0:19,0:19:51.14:0,51,576	0/0:17,0:18:51.14:0,51,577	0/0:23,0:23:63.17:0,63,713	0/0:21,0:21:57.15:0,57,646	0/0:19,1:19:20.66:0,21,482	0/0:28,0:28:81.24:0,81,934	1/1:33,0:33:62.17:193,62,0	0/0:21,0:21:48.14:0,48,554	0/0:10,0:10:24.07:0,24,275	0/0:17,0:17:45.13:0,45,518	0/0:12,0:12:30.06:0,30,334	0/0:9,0:9:27.08:0,27,308	0/0:21,1:22:35.70:0,36,650	0/0:23,0:23:66.20:0,66,761	0/0:19,0:19:54.16:0,54,623	0/1:6,23:29:21.70:554,0,22	1/1:2,26:28:69.04:632,69,0	1/1:0,12:12:33.02:302,33,0
chr10	1141555	.	AAAG	A	1211.18	PASS	AB=1.000;AC=3;AF=0.056;AN=54;BaseQRankSum=7.228;DP=401;FS=15.468;HRun=0;HaplotypeScore=55.3170;InbreedingCoeff=0.6344;MQ=67.28;MQ0=6;MQRankSum=-0.629;QD=33.64;ReadPosRankSum=-4.746;VQSLOD=0.9586;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:60.59:0,61,1272	0/0:3,0:3:9.03:0,9,198	0/0:26,0:13:37.31:0,37,708	0/0:35,0:18:38.83:0,39,649	0/0:21,0:21:56.96:0,57,1149	0/0:23,0:23:69.22:0,69,1465	0/0:8,0:8:24.07:0,24,486	1/1:2,29:31:87.25:1305,87,0	0/0:6,0:6:18.06:0,18,361	0/0:19,0:18:57.20:0,57,1237	0/0:10,0:10:30.10:0,30,651	0/0:5,0:5:15.05:0,15,331	0/0:10,0:10:30.10:0,30,626	0/0:6,0:6:15.05:0,15,319	0/0:12,0:12:36.10:0,36,715	0/0:6,0:6:18.06:0,18,361	0/0:21,0:21:63.21:0,63,1294	0/0:24,0:24:69.20:0,69,1358	0/0:15,0:15:42.14:0,42,889	0/0:11,0:11:30.06:0,30,575	0/0:4,0:4:12.04:0,12,265	0/0:5,0:5:15.03:0,15,289	0/0:10,0:10:30.10:0,30,661	0/1:5,0:5:4.84:5,0,238	0/0:19,0:19:57.20:0,57,1230	0/0:20,0:20:57.18:0,57,1133	0/0:21,0:20:63.20:0,63,1327	./.
chr10	1142934	.	GCA	G	1228.98	PASS	AB=0.897;AC=24;AF=0.462;AN=52;BaseQRankSum=8.097;DP=581;FS=3.200;HRun=0;HaplotypeScore=78.9688;InbreedingCoeff=-0.1010;MQ=66.11;MQ0=16;MQRankSum=-0.255;QD=3.31;ReadPosRankSum=0.910;VQSLOD=1.7675;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:30:5.98:0,6,49	0/1:6,1:7:21.02:21,0,123	./.	./.	0/1:12,3:16:99:108,0,175	0/1:18,1:20:17.03:17,0,330	0/1:24,3:27:8.51:9,0,249	0/0:18,0:17:12.65:0,13,94	1/1:13,0:21:17.04:84,17,0	0/1:18,2:20:33.04:33,0,332	0/0:18,2:20:0.05:0,0,375	0/1:26,2:28:11.95:12,0,638	0/1:16,2:19:3.04:3,0,376	0/1:21,2:23:28.17:28,0,412	0/1:24,5:28:65.97:66,0,722	0/0:17,4:22:12.07:0,12,561	1/1:6,0:14:11.36:56,11,0	0/0:17,0:17:30.04:0,30,429	0/0:9,0:9:10.50:0,10,111	0/1:16,3:19:84.20:84,0,362	0/1:27,1:27:2.01:2,0,510	0/1:18,0:18:35.88:36,0,214	0/0:16,0:15:6.56:0,7,297	0/1:21,3:23:66.04:66,0,303	0/1:12,2:14:15.09:15,0,171	1/1:11,10:21:33.09:360,33,0	1/1:4,9:15:23.63:226,24,0	1/1:3,5:8:15.93:167,16,0
chr10	1144118	.	A	AC	768.20	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-5.354;DP=551;FS=11.529;HRun=0;HaplotypeScore=49.9000;InbreedingCoeff=0.7766;MQ=69.72;MQ0=0;MQRankSum=0.694;QD=40.43;ReadPosRankSum=1.203;VQSLOD=3.2546;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:57.18:0,57,780	0/0:8,0:8:24.08:0,24,336	0/0:8,0:8:0.69:0,1,223	0/0:7,0:8:12:0,12,223	0/0:26,0:26:78.25:0,78,1065	0/0:15,0:15:42.14:0,42,585	0/0:19,0:19:57.17:0,57,776	0/0:47,0:47:99:0,138,1886	0/0:10,0:10:27.09:0,27,377	0/0:22,0:22:66.21:0,66,903	0/0:21,0:21:60.20:0,60,839	0/0:19,0:19:54.18:0,54,755	0/0:20,0:20:54.16:0,54,736	0/0:31,0:31:87.26:0,87,1179	0/0:20,0:20:54.18:0,54,754	0/0:15,0:15:39.13:0,39,545	1/1:0,19:19:54.18:863,54,0	0/0:18,0:18:48.16:0,48,671	0/0:20,0:20:60.15:0,60,765	0/0:25,0:25:75.24:0,75,1031	0/0:10,0:10:30.10:0,30,418	0/0:21,0:21:63.21:0,63,880	0/0:24,0:24:72.24:0,72,1006	0/0:17,0:17:51.17:0,51,713	0/0:23,0:23:69.21:0,69,931	0/0:28,0:28:84.26:0,84,1144	0/0:29,0:29:78.26:0,78,1088	0/0:8,0:8:18.04:0,18,234
chr10	1148647	.	TATTC	T	5325.97	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=12.719;DP=683;FS=2.407;HRun=0;HaplotypeScore=113.7654;InbreedingCoeff=0.9936;MQ=81.49;MQ0=0;MQRankSum=-2.950;QD=46.72;ReadPosRankSum=1.585;VQSLOD=5.7448;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,46:46:99:2127,114,0	0/0:8,0:8:24.08:0,24,604	0/0:17,0:17:39.55:0,40,882	0/0:22,0:22:47.18:0,47,1059	0/0:16,0:16:48.16:0,48,1279	0/0:24,0:24:66.23:0,66,1754	0/0:29,0:29:81.28:0,81,2129	1/1:5,28:33:81.28:1463,81,0	0/0:28,0:28:81.28:0,81,2130	0/0:23,0:23:69.24:0,69,1821	0/0:14,0:14:42.14:0,42,1112	0/0:34,0:34:96.33:0,96,2560	0/0:25,0:25:75.26:0,75,1848	0/0:28,0:28:78.25:0,78,1961	0/0:33,0:33:90.31:0,90,2401	0/0:23,0:23:69.24:0,69,1841	1/1:1,34:35:93.32:1736,93,0	0/0:30,0:30:87.30:0,87,2201	0/0:27,0:27:78.26:0,78,1969	0/0:17,0:17:48.16:0,48,1214	0/0:44,0:44:99:0,123,3246	0/0:20,0:20:57.20:0,57,1516	0/0:15,0:15:45.15:0,45,1168	0/0:27,0:27:81.28:0,81,2143	0/0:19,0:19:57.20:0,57,1469	0/0:22,0:22:66.22:0,66,1653	0/0:18,0:18:51.16:0,51,1270	0/0:6,0:6:15.05:0,15,400
chr10	1150132	.	A	AAAAG	524.36	PASS	AB=1.000;AC=4;AF=0.071;AN=56;BaseQRankSum=6.197;DP=528;FS=1.709;HRun=0;HaplotypeScore=100.5178;InbreedingCoeff=0.4183;MQ=63.50;MQ0=2;MQRankSum=-3.648;QD=7.39;ReadPosRankSum=-1.521;VQSLOD=2.4034;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:4.10:0,4,227	0/0:9,0:9:24.02:0,24,317	0/1:17,0:7:29.77:30,0,109	0/0:12,0:8:10.30:0,10,110	0/0:28,0:28:64.15:0,64,754	0/0:13,0:13:30.07:0,30,417	0/0:17,0:17:29.84:0,30,359	0/1:31,0:30:11.40:11,0,379	0/0:21,0:21:32.64:0,33,386	0/0:18,0:18:48.07:0,48,585	0/0:19,0:19:45.03:0,45,501	0/0:13,0:13:32.97:0,33,412	0/0:15,0:15:36.07:0,36,464	0/0:11,0:11:27.06:0,27,335	0/0:28,0:27:72.05:0,72,873	0/0:24,0:24:56.94:0,57,708	1/1:12,9:23:39.35:596,39,0	0/0:12,0:12:26.78:0,27,307	0/0:20,0:20:37.38:0,37,567	0/0:24,0:24:56.94:0,57,621	0/0:13,0:13:23.99:0,24,292	0/0:15,0:15:45.11:0,45,586	0/0:26,0:25:66.11:0,66,837	0/0:21,0:21:29.79:0,30,381	0/0:12,0:12:31.74:0,32,304	0/0:25,0:25:61.78:0,62,672	0/0:20,0:20:51.03:0,51,626	0/0:11,0:10:23.91:0,24,255
chr10	1150911	.	GA	G	1633.73	PASS	AB=0.952;AC=9;AF=0.161;AN=56;BaseQRankSum=9.199;DP=620;FS=2.030;HRun=10;HaplotypeScore=62.9499;InbreedingCoeff=0.8445;MQ=65.56;MQ0=3;MQRankSum=-1.026;QD=14.72;ReadPosRankSum=2.768;VQSLOD=4.0960;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,113,1314	0/0:10,0:10:18.05:0,18,199	0/1:19,1:15:11.50:11,0,138	0/0:14,1:13:6.67:0,7,205	0/0:26,1:27:40.11:0,40,656	0/0:21,0:21:54.11:0,54,584	0/0:19,0:19:51.02:0,51,521	0/0:21,0:21:54.10:0,54,561	0/0:21,1:22:30.71:0,31,540	0/0:23,0:23:60:0,60,644	0/0:29,0:29:69.16:0,69,747	0/0:28,0:28:69.17:0,69,751	0/0:27,1:28:55.05:0,55,809	0/0:22,0:22:56.92:0,57,587	0/0:24,1:25:37.12:0,37,636	0/0:13,0:13:13.27:0,13,372	1/1:7,20:27:47.93:408,48,0	0/0:18,1:19:25.08:0,25,505	0/0:23,1:23:36.95:0,37,587	0/0:23,0:23:54.12:0,54,581	0/0:16,0:16:42.59:0,43,466	0/0:18,0:18:43.93:0,44,470	0/0:21,0:23:53.80:0,54,550	0/0:23,0:23:60.05:0,60,624	0/0:13,0:13:39.09:0,39,421	1/1:1,25:26:74.97:648,75,0	1/1:5,25:30:65.98:573,66,0	1/1:2,6:8:17.97:156,18,0
chr10	1153085	.	C	CT	923.26	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-5.051;DP=536;FS=3.197;HRun=9;HaplotypeScore=55.8398;InbreedingCoeff=0.9139;MQ=64.20;MQ0=8;MQRankSum=-2.749;QD=16.79;ReadPosRankSum=-3.385;VQSLOD=2.9996;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,12:16:6.97:279,7,0	0/0:3,0:3:6:0,6,52	0/0:11,0:10:23.99:0,24,208	0/0:9,0:9:20.99:0,21,181	0/0:25,1:24:56.95:0,57,489	0/0:21,0:20:38.99:0,39,339	0/0:21,0:21:44.98:0,45,391	1/1:11,21:33:48.94:721,49,0	0/0:20,0:19:32.86:0,33,286	0/0:27,0:27:67.99:0,68,579	0/0:11,0:11:20.99:0,21,182	0/0:18,0:18:38.98:0,39,339	0/0:23,0:22:50.99:0,51,443	0/0:19,0:19:35.95:0,36,305	0/0:21,0:22:44.99:0,45,391	0/0:23,0:22:32.86:0,33,283	1/1:1,0:6:11.32:55,11,0	0/0:16,0:16:41.86:0,42,353	0/0:15,0:15:32.96:0,33,281	0/0:24,0:24:47.99:0,48,417	0/0:22,0:22:62.99:0,63,547	0/0:22,0:22:50.97:0,51,443	0/0:25,0:24:53.88:0,54,469	0/0:16,0:16:32.88:0,33,286	0/0:19,0:19:35.98:0,36,313	0/0:21,0:22:62.02:0,62,527	0/0:29,0:28:62.98:0,63,547	0/0:16,0:16:29.99:0,30,260
chr10	1156557	.	G	GA	3702.97	PASS	AB=0.923;AC=13;AF=0.232;AN=56;BaseQRankSum=-0.517;DP=634;FS=6.212;HRun=10;HaplotypeScore=158.7242;InbreedingCoeff=0.9115;MQ=72.17;MQ0=0;MQRankSum=-2.119;QD=19.70;ReadPosRankSum=0.398;VQSLOD=2.3878;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,30:31:78.20:832,78,0	0/0:11,0:11:20.97:0,21,172	0/1:10,0:11:3.68:4,0,89	0/0:13,0:12:7.17:0,7,132	0/0:21,0:21:33.59:0,34,417	0/0:23,0:23:68.90:0,69,563	0/0:15,0:15:38.94:0,39,320	1/1:13,4:39:77.59:449,78,0	0/0:21,0:21:56.88:0,57,459	0/0:36,0:36:83.78:0,84,684	0/0:24,0:24:50.91:0,51,419	0/0:27,0:27:77.85:0,78,628	0/0:26,0:28:56.29:0,56,533	0/0:26,0:26:62.91:0,63,517	0/0:24,0:25:64.94:0,65,523	0/0:32,0:32:83.86:0,84,686	1/1:3,2:20:40.01:218,40,0	0/0:18,0:18:47.94:0,48,394	0/0:21,0:21:47.90:0,48,390	0/0:16,0:16:44.94:0,45,367	0/0:9,0:9:20.95:0,21,169	0/0:21,0:21:50.87:0,51,412	0/0:30,0:30:77.89:0,78,637	0/0:15,0:15:41.95:0,42,345	0/0:12,0:12:32.96:0,33,271	1/1:4,22:26:63.13:655,63,0	1/1:4,36:40:77.78:1002,78,0	1/1:2,18:20:51.13:543,51,0
chr10	1157410	.	A	ATTGGTTGG	3605.97	PASS	AC=10;AF=0.192;AN=52;BaseQRankSum=-4.284;DP=688;FS=0.000;HRun=0;HaplotypeScore=162.4736;InbreedingCoeff=0.8645;MQ=57.81;MQ0=4;MQRankSum=-4.433;QD=27.95;ReadPosRankSum=-4.171;VQSLOD=2.1981;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:19,22:43:36.12:1366,36,0	0/0:7,0:7:15.05:0,15,314	./.	./.	0/0:27,0:27:54.17:0,54,1286	0/0:15,0:16:21.07:0,21,520	0/0:27,0:27:45.15:0,45,1025	0/0:22,0:21:3:0,3,26	1/1:3,0:14:11.97:97,12,0	0/0:24,0:24:33.11:0,33,798	0/0:12,0:12:27.09:0,27,668	0/0:24,0:24:33.10:0,33,741	0/0:30,0:30:54.17:0,54,1232	0/0:20,0:20:30.10:0,30,709	0/0:22,0:22:36.12:0,36,891	0/0:25,0:25:39.13:0,39,937	0/0:42,0:42:63.22:0,63,1484	0/0:25,0:25:42.14:0,42,994	0/0:21,0:20:21.06:0,21,469	0/0:18,0:18:18.06:0,18,420	0/0:44,0:44:54.18:0,54,1227	0/0:16,0:16:33.11:0,33,764	0/0:12,0:12:0.33:0,0,140	0/0:39,0:39:66.18:0,66,1572	0/0:21,0:21:33.11:0,33,788	1/1:13,10:25:36.12:991,36,0	1/1:22,12:37:23.97:907,24,0	1/1:2,4:10:6.02:244,6,0
chr10	1158059	.	A	AT	1391.74	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=10.060;DP=494;FS=4.041;HRun=0;HaplotypeScore=58.7117;InbreedingCoeff=0.9907;MQ=81.59;MQ0=0;MQRankSum=-9.290;QD=36.62;ReadPosRankSum=-2.672;VQSLOD=2.4746;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,8:9:24.07:323,24,0	0/0:5,0:5:15.02:0,15,190	0/0:21,0:21:60.17:0,60,802	0/0:8,0:8:24.08:0,24,331	0/0:27,0:27:81.25:0,81,1100	0/0:23,0:23:69.22:0,69,948	0/0:15,0:15:42.13:0,42,570	1/1:1,19:20:60.19:836,60,0	0/0:13,0:13:39.12:0,39,527	0/0:21,0:20:63.21:0,63,881	0/0:23,0:23:66.21:0,66,909	0/0:8,0:8:24.08:0,24,336	0/0:18,0:18:54.17:0,54,737	0/0:17,0:17:48.14:0,48,639	0/0:10,0:10:30.10:0,30,420	0/0:22,0:22:66.22:0,66,923	1/1:0,9:9:27.09:375,27,0	0/0:27,0:27:81.25:0,81,1113	0/0:20,0:20:60.20:0,60,826	0/0:29,0:29:84.28:0,84,1174	0/0:12,0:12:36.12:0,36,503	0/0:16,0:16:48.16:0,48,671	0/0:25,0:25:72.24:0,72,1007	0/0:9,0:9:24.08:0,24,336	0/0:21,0:21:63.18:0,63,844	0/0:27,0:27:81.27:0,81,1120	0/0:28,0:28:84.26:0,84,1142	0/0:11,0:11:33.11:0,33,461
chr10	1158066	.	GCT	G	1951.79	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=10.551;DP=509;FS=4.758;HRun=0;HaplotypeScore=70.0138;InbreedingCoeff=0.9860;MQ=80.35;MQ0=0;MQRankSum=-10.429;QD=42.43;ReadPosRankSum=-2.726;VQSLOD=4.5023;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,8:9:24.08:385,24,0	0/0:4,0:4:12.04:0,12,232	0/0:22,0:22:63.04:0,63,1186	0/0:8,0:8:21.07:0,21,405	0/0:25,0:25:75.26:0,75,1524	0/0:25,0:25:75.26:0,75,1511	0/0:14,0:14:42.14:0,42,853	1/1:0,25:25:72.25:1173,72,0	0/0:13,0:13:39.12:0,39,757	0/0:20,0:19:60.20:0,60,1181	0/0:20,0:20:60.21:0,60,1219	0/0:11,0:11:33.11:0,33,658	0/0:20,0:20:60.21:0,60,1205	0/0:20,0:20:60.19:0,60,1170	0/0:10,0:10:30.10:0,30,609	0/0:21,0:21:63.22:0,63,1280	1/1:0,12:12:33.10:536,33,0	0/0:25,0:25:75.26:0,75,1523	0/0:23,0:23:69.23:0,69,1368	0/0:29,0:29:87.30:0,87,1766	0/0:11,0:11:33.11:0,33,671	0/0:21,0:21:63.20:0,63,1229	0/0:26,0:26:78.27:0,78,1571	0/0:9,0:9:27.08:0,27,511	0/0:18,0:18:54.19:0,54,1097	0/0:27,0:27:81.28:0,81,1647	0/0:30,0:30:90.31:0,90,1829	0/0:11,0:11:33.11:0,33,670
chr10	1158099	.	G	GA	1070.92	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-0.434;DP=512;FS=6.278;HRun=8;HaplotypeScore=55.5960;InbreedingCoeff=0.9306;MQ=75.58;MQ0=0;MQRankSum=-3.106;QD=21.42;ReadPosRankSum=-1.588;VQSLOD=3.2623;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,13:13:33.10:381,33,0	0/0:6,0:6:15.01:0,15,137	0/0:22,0:22:23.74:0,24,374	0/0:4,0:4:3:0,3,27	0/0:21,0:21:51.03:0,51,467	0/0:25,0:25:75.04:0,75,686	0/0:7,0:8:23.05:0,23,198	1/1:8,16:24:20.68:492,21,0	0/0:11,0:11:30.02:0,30,275	0/0:21,0:22:59.04:0,59,520	0/0:17,0:17:45.02:0,45,412	0/0:15,0:15:42.02:0,42,384	0/0:20,0:20:57.03:0,57,522	0/0:18,0:18:51.03:0,51,467	0/0:14,0:14:39.02:0,39,357	0/0:25,0:25:60.02:0,60,549	1/1:1,12:13:25.99:340,26,0	0/0:22,0:22:54:0,54,488	0/0:20,0:20:48.02:0,48,439	0/0:29,0:29:71.99:0,72,650	0/0:16,0:16:45:0,45,407	0/0:20,0:20:60.03:0,60,549	0/0:25,0:25:68.98:0,69,614	0/0:10,0:10:27.01:0,27,247	0/0:19,0:19:48.01:0,48,435	0/0:29,0:29:84.04:0,84,766	0/0:36,0:36:84.33:0,84,917	0/0:8,0:8:24.01:0,24,220
chr10	1158744	.	C	CT	725.79	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-1.667;DP=675;FS=4.565;HRun=2;HaplotypeScore=74.5760;InbreedingCoeff=0.9939;MQ=67.36;MQ0=1;MQRankSum=-0.416;QD=36.29;ReadPosRankSum=0.020;VQSLOD=4.1011;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,111,1373	0/0:8,0:8:21.07:0,21,260	0/0:35,0:33:90.28:0,90,1095	0/0:34,0:31:78.24:0,78,953	0/0:24,0:24:72.23:0,72,893	0/0:18,0:18:54.14:0,54,643	0/0:22,0:22:63.20:0,63,780	0/0:27,0:27:78.24:0,78,966	0/0:27,0:27:78.24:0,78,967	0/0:17,0:17:48.14:0,48,586	0/0:17,0:17:48.15:0,48,595	0/0:21,0:21:63.20:0,63,780	0/0:30,0:30:84.25:0,84,1021	0/0:26,0:26:75.24:0,75,930	0/0:33,0:33:99:0,99,1227	0/0:27,0:27:81.25:0,81,1004	1/1:0,20:20:57.19:821,57,0	0/0:8,0:8:24.08:0,24,298	0/0:29,0:29:75.23:0,75,917	0/0:18,0:18:54.16:0,54,657	0/0:34,0:34:95.97:0,96,1174	0/0:18,0:18:48.15:0,48,595	0/0:16,0:16:39.12:0,39,483	0/0:36,0:36:90.28:0,90,1115	0/0:21,0:21:60.19:0,60,744	0/0:14,0:14:42.13:0,42,521	0/0:25,0:25:75.20:0,75,903	0/0:28,0:28:84.26:0,84,1040
chr10	1160852	.	G	GTAT	1663.89	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-4.536;DP=604;FS=6.097;HRun=0;HaplotypeScore=83.3531;InbreedingCoeff=0.9840;MQ=83.67;MQ0=0;MQRankSum=-5.116;QD=53.67;ReadPosRankSum=-4.980;VQSLOD=4.0239;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:81.28:0,81,1349	0/0:6,0:6:18.06:0,18,297	0/0:24,0:24:57.06:0,57,910	0/0:18,0:17:50.91:0,51,776	0/0:17,0:17:51.17:0,51,845	0/0:28,0:28:75.24:0,75,1224	0/0:25,0:25:69.20:0,69,1089	1/1:8,20:31:90.20:1759,90,0	0/0:12,0:12:36.12:0,36,599	0/0:19,0:19:54.18:0,54,899	0/0:22,0:22:63.22:0,63,1050	0/0:17,0:17:48.16:0,48,799	0/0:25,0:25:75.23:0,75,1192	0/0:30,0:30:84.29:0,84,1393	0/0:21,0:21:60.17:0,60,947	0/0:21,0:21:63.22:0,63,1050	0/0:24,0:24:72.25:0,72,1187	0/0:29,0:29:87.26:0,87,1414	0/0:28,0:28:72.24:0,72,1177	0/0:15,0:15:45.15:0,45,745	0/0:28,0:28:63.20:0,63,1024	0/0:13,0:13:36.12:0,36,596	0/0:20,0:20:60.21:0,60,999	0/0:23,0:23:66.23:0,66,1099	0/0:24,0:24:66.23:0,66,1100	0/0:28,0:28:78.27:0,78,1299	0/0:21,0:21:60.20:0,60,993	0/0:6,0:6:18.06:0,18,300
chr10	1161502	.	ACCC	A	2853.95	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.383;DP=739;FS=5.820;HRun=3;HaplotypeScore=102.8195;InbreedingCoeff=0.9996;MQ=88.42;MQ0=0;MQRankSum=-5.710;QD=43.91;ReadPosRankSum=0.769;VQSLOD=2.8763;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,42:42:96.33:1789,96,0	0/0:11,0:11:33.11:0,33,769	0/0:24,0:24:69.24:0,69,1654	0/0:29,0:29:84.29:0,84,2043	0/0:26,0:26:78.25:0,78,1671	0/0:26,0:26:78.25:0,78,1792	0/0:26,0:26:78.27:0,78,1885	1/1:0,23:23:69.20:1187,69,0	0/0:24,0:24:72.25:0,72,1771	0/0:21,0:21:60.21:0,60,1438	0/0:21,0:21:63.22:0,63,1517	0/0:36,0:36:99:0,108,2530	0/0:47,0:47:99:0,138,3316	0/0:31,0:31:90.31:0,90,2101	0/0:35,0:35:99:0,105,2539	0/0:23,0:23:69.24:0,69,1663	0/0:24,0:24:72.25:0,72,1723	0/0:21,0:21:63.22:0,63,1530	0/0:20,0:20:60.21:0,60,1465	0/0:18,0:18:54.19:0,54,1278	0/0:47,0:47:99:0,141,3231	0/0:10,0:10:30.10:0,30,645	0/0:23,0:23:69.22:0,69,1544	0/0:36,0:36:99:0,108,2638	0/0:25,0:25:75.26:0,75,1745	0/0:35,0:35:99:0,99,2330	0/0:21,0:21:63.22:0,63,1520	0/0:14,0:14:42.14:0,42,1035
chr10	1165011	.	T	TATTCATTC	1638.36	PASS	AB=1.000;AC=3;AF=0.060;AN=50;BaseQRankSum=-2.320;DP=731;FS=5.447;HRun=0;HaplotypeScore=176.9103;InbreedingCoeff=0.6199;MQ=62.48;MQ0=2;MQRankSum=-6.537;QD=25.60;ReadPosRankSum=-1.862;VQSLOD=2.8905;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:24:15.05:0,15,246	0/0:17,0:17:21.07:0,21,484	./.	./.	0/0:46,0:45:75.23:0,75,1748	0/0:26,0:24:33.11:0,33,782	0/0:30,0:30:39.13:0,39,886	./.	1/1:20,9:34:42.14:1669,42,0	0/0:37,0:37:51.17:0,51,1234	0/0:26,0:27:30.10:0,30,696	0/0:26,0:26:45.15:0,45,1077	0/0:25,0:25:51.17:0,51,1229	0/0:25,0:25:30.09:0,30,692	0/0:33,0:33:60.21:0,60,1454	0/0:26,0:26:30.09:0,30,693	0/0:13,0:19:18.06:0,18,342	0/0:24,0:23:36.11:0,36,841	0/0:23,0:20:15.05:0,15,344	0/0:32,0:32:44.28:0,44,1084	0/0:26,0:26:36.12:0,36,886	0/0:34,0:34:51.15:0,51,1152	0/0:27,0:27:33.11:0,33,817	0/0:17,0:17:18.06:0,18,369	0/0:32,0:32:39.10:0,39,866	0/1:30,0:30:74.22:74,0,747	0/0:33,0:33:60.18:0,60,1362	0/0:10,0:10:24.08:0,24,594
chr10	1165329	.	CGTT	C	297.12	PASS	AB=0.975;AC=9;AF=0.161;AN=56;BaseQRankSum=6.285;DP=923;FS=0.691;HRun=0;HaplotypeScore=153.6312;InbreedingCoeff=0.0166;MQ=65.02;MQ0=9;MQRankSum=-3.490;QD=1.18;ReadPosRankSum=-0.532;VQSLOD=1.9088;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:3.07:0,3,36	0/0:14,0:14:24.08:0,24,442	0/0:43,0:33:9.46:0,9,130	0/1:36,0:31:7.03:7,0,301	0/1:30,2:32:36.75:37,0,655	0/0:18,0:18:39.13:0,39,720	0/0:31,0:30:1.41:0,1,885	0/0:12,0:12:3.27:0,3,13	0/0:37,0:36:74.49:0,74,880	0/1:38,1:39:10.05:10,0,1031	0/0:21,0:21:36.08:0,36,559	0/0:42,0:42:78.24:0,78,1405	0/0:27,0:27:54.14:0,54,940	0/0:33,0:32:54.17:0,54,955	0/0:50,1:50:52.20:0,52,1691	0/0:34,1:34:28.08:0,28,1178	0/0:15,0:15:8.73:0,9,65	0/1:32,2:34:39.25:39,0,1322	0/0:29,0:27:24.06:0,24,395	0/0:37,0:37:66.20:0,66,1233	0/0:84,0:83:99:0,145,2626	0/0:34,0:34:45.15:0,45,784	0/0:15,0:14:15.04:0,15,237	0/0:66,0:65:99:0,141,2614	0/1:26,1:27:5.09:5,0,506	0/1:46,0:46:99:100,0,244	0/1:26,0:25:76.01:149,0,76	1/1:11,0:11:9.01:84,9,0
chr10	1165359	.	TGTG	T	1257.19	PASS	AB=0.907;AC=8;AF=0.143;AN=56;BaseQRankSum=12.131;DP=1094;FS=3.084;HRun=0;HaplotypeScore=163.1188;InbreedingCoeff=0.1407;MQ=49.99;MQ0=100;MQRankSum=-8.197;QD=5.61;ReadPosRankSum=-0.684;VQSLOD=2.8499;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:36,0:34:41.21:148,0,41	0/0:17,0:16:36.81:0,37,572	0/0:46,0:6:11.06:0,11,111	0/1:66,0:18:11.63:12,0,160	0/0:34,0:26:34.31:0,34,861	0/0:29,0:27:49.76:0,50,963	0/0:47,0:40:84.80:0,85,1291	0/1:24,0:7:9.84:61,0,10	0/0:46,0:42:30.85:0,31,453	0/0:45,0:36:66.17:0,66,1197	0/0:22,0:17:28.60:0,29,561	0/0:43,0:40:92.44:0,92,1642	0/0:36,0:35:81.03:0,81,1241	0/0:36,0:34:64:0,64,1265	0/0:61,0:55:99:0,104,2277	0/0:52,0:44:75.21:0,75,1638	0/1:19,0:16:40.11:57,0,40	0/0:52,0:52:93.26:0,93,2023	0/0:27,0:16:34.99:0,35,449	0/0:33,0:30:58.85:0,59,1374	0/0:82,0:77:99:0,177,3012	0/0:32,0:27:70.32:0,70,948	0/0:17,0:13:8.31:0,8,289	0/0:88,0:85:99:0,196,3372	0/0:24,0:19:30.87:0,31,578	0/1:31,6:33:99:448,0,175	1/1:25,10:28:37.19:543,37,0	0/1:2,5:7:21.60:129,0,22
chr10	1165362	.	GGTT	G	624.84	PASS	AB=0.949;AC=7;AF=0.125;AN=56;BaseQRankSum=10.410;DP=1092;FS=7.072;HRun=0;HaplotypeScore=165.3226;InbreedingCoeff=0.0394;MQ=48.82;MQ0=105;MQRankSum=-10.008;QD=3.91;ReadPosRankSum=0.349;VQSLOD=2.2169;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:27,8:33:44.69:260,0,45	0/0:18,0:17:42.02:0,42,658	0/0:52,0:5:0.92:0,1,105	0/0:69,0:16:8.28:0,8,160	0/0:33,0:25:56.32:0,56,926	0/0:30,0:28:69.69:0,70,1184	0/0:49,0:41:95.68:0,96,1524	0/1:25,2:9:40.97:94,0,41	0/0:46,0:42:96.40:0,96,1147	0/0:42,0:33:69.74:0,70,1326	0/0:19,0:14:29.93:0,30,516	0/0:41,0:38:96.09:0,96,1720	0/0:36,0:35:81.24:0,81,1425	0/0:36,0:34:76.10:0,76,1359	0/0:62,0:56:99:0,138,2505	0/0:49,0:41:99:0,101,1860	1/1:19,0:16:1.29:87,1,0	0/0:52,0:52:99:0,139,2253	0/0:24,0:14:27.07:0,27,471	0/0:32,0:29:67.25:0,67,1323	0/0:81,0:76:99:0,183,2895	0/0:31,0:26:60.10:0,60,1022	0/0:18,0:14:30.06:0,30,441	0/0:90,0:87:99:0,195,3601	0/0:22,0:17:41.77:0,42,635	0/1:37,0:33:79.78:80,0,413	0/1:34,0:28:21.91:157,0,22	0/1:8,0:7:30.80:72,0,31
chr10	1165365	.	TGTTGTG	T	1802.23	PASS	AB=0.966;AC=8;AF=0.143;AN=56;BaseQRankSum=13.734;DP=1096;FS=0.432;HRun=0;HaplotypeScore=207.3060;InbreedingCoeff=0.1106;MQ=48.28;MQ0=109;MQRankSum=-9.861;QD=8.54;ReadPosRankSum=-2.841;VQSLOD=2.2174;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:32,2:33:61.85:184,0,62	0/0:17,0:16:42.12:0,42,873	0/0:58,0:6:11.37:0,11,91	0/0:70,0:14:7.09:0,7,114	0/0:33,0:25:62.98:0,63,1380	0/0:30,0:28:55.75:0,56,1425	0/0:48,0:40:92.94:0,93,1965	0/1:33,2:14:14.29:233,0,14	0/1:47,0:42:99:251,0,221	0/0:38,0:30:67.93:0,68,1795	0/0:17,0:13:30.01:0,30,540	0/0:42,0:39:99:0,99,2434	0/0:36,0:35:83.30:0,83,1894	0/0:35,0:32:57.06:0,57,1796	0/0:63,0:57:99:0,119,3310	0/0:50,0:41:61.68:0,62,2580	0/1:15,2:16:28.90:152,0,29	0/0:52,0:52:99:0,131,3176	0/0:21,0:12:26.77:0,27,525	0/0:33,0:30:55.21:0,55,1785	0/0:81,0:75:99:0,138,3270	0/0:28,0:23:51.14:0,51,1373	0/0:17,0:14:6.23:0,6,524	0/0:90,0:87:99:0,195,4841	0/0:23,0:18:38.92:0,39,919	0/1:34,0:29:99:454,0,220	1/1:33,0:27:44.10:543,44,0	0/1:8,0:7:58.44:127,0,58
chr10	1165389	.	GGTT	G	1104.31	PASS	AB=0.954;AC=11;AF=0.212;AN=52;BaseQRankSum=6.613;DP=1110;FS=4.470;HRun=0;HaplotypeScore=150.4375;InbreedingCoeff=-0.0642;MQ=46.61;MQ0=141;MQRankSum=0.406;QD=3.04;ReadPosRankSum=1.755;VQSLOD=2.5542;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:20:22.24:37,0,22	0/0:18,0:16:36.58:0,37,589	./.	./.	0/0:33,1:25:2.06:0,2,600	0/0:36,0:26:42.14:0,42,756	0/1:42,0:34:20.70:21,0,379	0/0:57,0:25:5.93:0,6,40	0/0:40,0:33:15.14:0,15,96	0/1:47,0:34:18.32:18,0,640	0/0:12,0:9:15.50:0,16,227	0/0:49,0:42:20.44:0,20,910	0/1:29,2:29:37.94:38,0,521	0/0:43,0:38:69.16:0,69,1160	0/0:53,0:49:24.67:0,25,1002	0/0:53,0:45:14.95:0,15,960	0/1:16,0:13:1.85:2,0,117	0/0:47,0:47:35.09:0,35,1027	0/1:28,1:17:67.82:68,0,75	0/0:33,0:28:23.51:0,24,384	0/0:67,0:59:83.85:0,84,1294	0/0:28,0:23:39.07:0,39,644	0/1:20,0:18:37.37:37,0,576	0/1:46,42:85:26.04:631,0,26	0/0:22,0:16:36.11:0,36,623	0/1:33,0:23:43.12:43,0,92	1/1:28,5:27:29.58:353,30,0	0/0:8,0:7:3.01:0,3,43
chr10	1165450	.	GTTA	G	947.16	PASS	AB=0.810;AC=8;AF=0.148;AN=54;BaseQRankSum=8.512;DP=722;FS=4.601;HRun=0;HaplotypeScore=127.8178;InbreedingCoeff=0.2870;MQ=56.39;MQ0=17;MQRankSum=-3.957;QD=8.53;ReadPosRankSum=-1.426;VQSLOD=3.0292;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:5,1:6:2.92:17,3,0	0/0:16,0:15:45.13:0,45,944	0/0:43,0:31:89.50:0,90,1727	0/0:41,0:25:55.77:0,56,1156	0/0:24,0:23:66.21:0,66,1376	0/0:14,0:12:33.11:0,33,750	0/0:28,0:26:75.23:0,75,1601	./.	0/1:36,4:38:99:413,0,358	0/0:31,0:29:74.99:0,75,1588	0/0:12,0:10:29.95:0,30,515	0/0:37,0:34:99:0,99,2105	0/0:26,0:26:78.25:0,78,1725	0/0:29,1:29:84.27:0,84,1800	0/0:38,0:37:99:0,99,2079	0/0:44,0:42:99:0,111,2435	1/1:9,1:8:5.22:30,5,0	0/0:26,0:26:59.30:0,59,1193	0/0:27,0:25:74.06:0,74,1402	0/0:27,0:26:63.21:0,63,1367	0/0:36,0:36:99:0,105,2145	0/0:17,0:16:39.11:0,39,739	0/0:25,0:24:60.19:0,60,1283	0/0:51,0:51:99:0,105,2180	0/0:18,0:17:48.16:0,48,1072	0/1:21,8:28:99:348,0,229	0/1:11,8:19:99:225,0,145	0/1:5,1:6:22.90:45,0,23
chr10	1165518	.	T	TGTG	1397.42	PASS	AB=0.716;AC=5;AF=0.089;AN=56;BaseQRankSum=5.839;DP=885;FS=9.857;HRun=0;HaplotypeScore=127.2182;InbreedingCoeff=0.7608;MQ=49.84;MQ0=86;MQRankSum=-5.786;QD=11.00;ReadPosRankSum=-6.144;VQSLOD=0.7749;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:24,5:21:33.96:508,34,0	0/0:9,0:9:27.06:0,27,404	0/0:59,0:13:26.87:0,27,337	0/0:72,0:20:35.29:0,35,459	0/0:26,0:25:70.68:0,71,1111	0/0:15,0:12:24.02:0,24,325	0/0:37,0:28:78.10:0,78,1105	0/1:35,22:33:24.66:547,0,25	0/0:36,0:35:89.52:0,90,1189	0/0:34,0:27:78.18:0,78,1149	0/0:18,0:14:38.10:0,38,491	0/0:34,0:31:78.15:0,78,1206	0/0:31,0:29:81.14:0,81,1144	0/0:27,0:20:54.10:0,54,788	0/0:46,0:44:99:0,111,1628	0/0:39,0:34:78.22:0,78,1234	1/1:18,19:38:27.71:472,28,0	0/0:34,0:34:9.38:0,9,1162	0/0:22,0:14:32.85:0,33,382	0/0:20,0:20:54.04:0,54,807	0/0:37,0:32:64.75:0,65,1057	0/0:17,0:16:45.07:0,45,678	0/0:14,0:14:39.09:0,39,632	0/0:51,0:48:75.86:0,76,1800	0/0:15,0:14:39.05:0,39,548	0/0:27,0:23:65.94:0,66,996	0/0:24,0:18:41.96:0,42,568	0/0:14,0:13:35.31:0,35,521
chr10	1165577	.	TTG	T	2013.24	PASS	AB=0.941;AC=7;AF=0.125;AN=56;BaseQRankSum=12.037;DP=771;FS=2.952;HRun=0;HaplotypeScore=106.5716;InbreedingCoeff=0.8729;MQ=67.81;MQ0=9;MQRankSum=-6.227;QD=17.98;ReadPosRankSum=-0.424;VQSLOD=3.4026;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:39,0:36:81.24:964,81,0	0/0:11,0:11:30.10:0,30,460	0/0:62,0:38:49.54:0,50,667	0/0:57,0:37:44.45:0,44,614	0/0:18,1:19:8.74:0,9,617	0/1:15,1:16:0.27:0,0,484	0/0:32,0:32:72.21:0,72,1113	1/1:21,0:21:36.06:391,36,0	0/0:30,0:30:72.25:0,72,1155	0/0:27,1:26:23.80:0,24,877	0/0:13,0:13:29.59:0,30,439	0/0:24,0:24:60.18:0,60,904	0/0:26,1:26:23.80:0,24,868	0/0:26,0:24:57.16:0,57,864	0/0:35,1:36:38.84:0,39,1089	0/0:27,0:27:66.22:0,66,1059	1/1:36,0:35:66.19:800,66,0	0/0:21,1:22:11.77:0,12,678	0/0:20,0:20:27.09:0,27,435	0/0:25,0:25:66.19:0,66,1009	0/0:36,0:36:84.29:0,84,1331	0/0:18,0:18:45.15:0,45,721	0/0:21,0:21:51.12:0,51,763	0/0:53,1:54:95.56:0,96,1982	0/0:24,0:24:69.21:0,69,1079	0/0:17,0:17:42.14:0,42,672	0/0:21,1:22:17.79:0,18,773	0/0:8,0:8:15.05:0,15,242
chr10	1165590	.	TG	T	808.63	PASS	AB=0.750;AC=5;AF=0.089;AN=56;BaseQRankSum=11.875;DP=758;FS=3.829;HRun=1;HaplotypeScore=93.6911;InbreedingCoeff=0.7835;MQ=62.55;MQ0=11;MQRankSum=-7.135;QD=8.51;ReadPosRankSum=1.266;VQSLOD=1.1977;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,25:38:43.78:378,44,0	0/0:11,0:11:33.09:0,33,502	0/0:55,0:34:79.25:0,79,1057	0/0:49,0:29:75.37:0,75,989	0/0:23,0:23:64.42:0,64,910	0/0:16,0:16:40.38:0,40,605	0/0:34,0:34:96.29:0,96,1426	0/1:16,8:23:18.40:193,0,18	0/0:33,0:33:87.29:0,87,1349	0/0:31,0:29:82.52:0,83,1215	0/0:12,0:12:36.12:0,36,552	0/0:23,0:24:69.22:0,69,1060	0/0:24,1:24:70.48:0,70,1063	0/0:26,0:24:66.18:0,66,1008	0/0:30,1:31:82.52:0,83,1267	0/0:29,1:30:87.29:0,87,1339	1/1:5,26:30:39.91:368,40,0	0/0:23,0:23:67.42:0,67,963	0/0:19,0:17:45.13:0,45,637	0/0:26,0:26:78.26:0,78,1206	0/0:34,0:34:96.32:0,96,1494	0/0:17,0:17:48.16:0,48,758	0/0:19,0:19:51.17:0,51,815	0/0:52,1:53:99:0,146,2253	0/0:24,0:24:72.24:0,72,1141	0/0:17,0:17:51.17:0,51,784	0/0:20,0:20:55.06:0,55,841	0/0:9,0:9:27.07:0,27,375
chr10	1165592	.	TG	T	816.27	PASS	AB=0.742;AC=5;AF=0.089;AN=56;BaseQRankSum=12.336;DP=744;FS=2.290;HRun=1;HaplotypeScore=90.8451;InbreedingCoeff=0.7915;MQ=61.98;MQ0=11;MQRankSum=-7.569;QD=8.50;ReadPosRankSum=1.022;VQSLOD=1.0845;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,25:38:51.48:402,51,0	0/0:11,0:11:33.11:0,33,517	0/0:53,0:31:65.70:0,66,996	0/0:47,0:27:71.15:0,71,904	0/0:20,0:20:55.43:0,55,822	0/0:16,0:16:40.38:0,40,605	0/0:32,0:32:93.30:0,93,1399	0/1:15,8:22:12.86:171,0,13	0/0:32,0:32:90.30:0,90,1386	0/0:30,0:28:82.52:0,83,1214	0/0:12,0:12:36.12:0,36,552	0/0:23,1:24:69.22:0,69,1052	0/0:24,0:23:67.47:0,67,1026	0/0:26,0:24:69.23:0,69,1057	0/0:31,0:31:82.52:0,83,1266	0/0:29,0:29:84.28:0,84,1300	1/1:8,25:32:44.88:373,45,0	0/0:23,0:23:64.41:0,64,929	0/0:18,0:16:42.13:0,42,609	0/0:26,0:26:78.26:0,78,1206	0/0:35,0:35:96.29:0,96,1475	0/0:17,0:17:48.16:0,48,758	0/0:19,0:19:51.17:0,51,813	0/0:53,0:53:99:0,146,2253	0/0:25,0:25:72.24:0,72,1140	0/0:17,0:17:51.17:0,51,784	0/0:21,0:21:58.08:0,58,887	0/0:7,0:7:21.07:0,21,315
chr10	1165697	.	T	TTG	263.35	PASS	AB=0.958;AC=11;AF=0.212;AN=52;BaseQRankSum=2.753;DP=614;FS=3.135;HRun=0;HaplotypeScore=104.6440;InbreedingCoeff=0.0735;MQ=54.26;MQ0=13;MQRankSum=-2.744;QD=1.39;ReadPosRankSum=-1.545;VQSLOD=2.0476;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:2.80:0,3,13	0/0:8,0:8:3.46:0,3,10	./.	0/0:29,0:18:3.01:0,3,30	0/0:22,0:16:20.10:0,20,172	0/0:18,0:17:10.25:0,10,102	0/0:29,1:30:7.50:0,8,429	1/1:19,0:19:3.94:28,4,0	0/1:18,0:18:28.84:29,0,34	0/0:17,0:16:13.58:0,14,131	0/0:15,0:14:8.98:0,9,95	0/0:22,0:21:22.23:0,22,213	0/1:14,10:24:36.66:37,0,55	0/0:24,0:24:35.08:0,35,298	0/0:23,0:23:30.12:0,30,295	0/1:17,0:17:17.50:17,0,208	1/1:43,1:44:12.06:223,12,0	0/1:12,0:11:24.95:25,0,87	0/0:24,0:20:17.70:0,18,164	0/0:21,0:21:20.63:0,21,227	0/0:43,0:42:39.01:0,39,323	0/1:20,0:19:3.01:3,0,160	0/1:15,0:13:27.11:27,0,79	0/0:37,0:37:45.09:0,45,484	0/0:20,0:20:16.01:0,16,142	0/1:18,0:18:14.21:14,0,73	0/0:16,0:16:5.42:0,5,30	./.
chr10	1165721	.	GTGTGTGTGTA	G	356.02	PASS	AB=1.000;AC=8;AF=0.154;AN=52;BaseQRankSum=-1.102;DP=593;FS=12.969;HRun=0;HaplotypeScore=150.3259;InbreedingCoeff=0.2288;MQ=50.58;MQ0=20;MQRankSum=-3.735;QD=2.49;ReadPosRankSum=-4.933;VQSLOD=-0.5214;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,32:38:3.01:94,3,0	0/0:6,0:6:8.88:0,9,235	./.	0/0:17,0:5:5.75:0,6,40	0/0:23,0:19:15.23:0,15,546	0/0:16,0:15:17.79:0,18,513	0/0:34,0:34:44.91:0,45,1008	1/1:17,0:16:4.13:187,4,0	0/1:24,0:23:5.31:5,0,200	0/0:22,0:20:21.21:0,21,891	0/0:11,0:10:12.93:0,13,253	0/0:23,0:21:23.86:0,24,997	0/0:23,0:23:23.99:0,24,705	0/0:27,0:27:41.86:0,42,1174	0/0:26,0:26:38.72:0,39,920	0/0:18,0:18:7.77:0,8,796	0/1:37,0:37:99:119,0,1169	0/1:12,0:11:54.48:54,0,413	0/0:19,0:14:22.18:0,22,524	0/0:26,0:26:36.56:0,37,1026	0/0:42,0:40:27.29:0,27,1152	0/0:22,0:21:5.74:0,6,1130	0/0:17,0:14:20.75:0,21,527	0/0:33,0:33:66.57:0,67,2254	0/0:19,0:19:36:0,36,1008	0/0:15,0:13:13.89:0,14,740	0/1:15,0:15:19.53:20,0,279	./.
chr10	1165729	.	GTA	G	884.96	PASS	AB=0.983;AC=21;AF=0.375;AN=56;BaseQRankSum=3.877;DP=563;FS=14.309;HRun=0;HaplotypeScore=82.3655;InbreedingCoeff=-0.1592;MQ=53.76;MQ0=19;MQRankSum=-0.901;QD=2.49;ReadPosRankSum=-2.636;VQSLOD=0.3215;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:33,0:33:2.97:20,3,0	0/1:6,0:6:9.97:10,0,82	0/1:11,0:4:21.69:26,0,22	0/1:18,0:6:15.06:15,0,29	0/0:26,0:22:24.13:0,24,293	0/1:16,0:15:13.98:14,0,144	0/0:30,0:30:31.17:0,31,447	1/1:16,0:15:21.77:229,22,0	0/1:22,0:22:28.28:28,0,38	0/1:21,0:19:3.63:4,0,331	0/1:11,2:12:14.29:14,0,131	0/1:19,0:17:26.37:26,0,335	0/0:22,0:22:29.94:0,30,317	0/1:26,0:26:6.34:6,0,354	0/0:20,0:20:11.67:0,12,335	0/0:20,0:20:12.85:0,13,338	1/1:35,0:35:31.68:319,32,0	0/1:13,0:12:58.97:59,0,184	0/0:18,0:13:18.23:0,18,247	0/0:25,0:25:17.18:0,17,363	0/1:40,0:38:58.06:58,0,266	0/1:21,0:21:43.90:44,0,314	0/0:17,0:14:16.71:0,17,184	0/0:27,0:27:54.48:0,54,784	0/1:18,1:19:10.64:11,0,290	0/1:14,0:12:27.96:75,0,28	0/1:11,1:12:15.99:93,0,16	0/0:3,0:1:2.99:0,3,23
chr10	1166357	.	T	TG	1670.90	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-3.853;DP=625;FS=0.000;HRun=7;HaplotypeScore=66.7731;InbreedingCoeff=0.9937;MQ=80.44;MQ0=1;MQRankSum=-2.322;QD=19.21;ReadPosRankSum=-3.116;VQSLOD=2.6177;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,22:27:48.15:580,48,0	0/0:9,0:9:18.02:0,18,174	0/0:19,0:19:42.02:0,42,395	0/0:14,0:13:24.02:0,24,232	0/0:20,0:20:48.05:0,48,456	0/0:18,0:18:42.06:0,42,405	0/0:25,0:25:68.77:0,69,643	1/1:1,29:30:78.24:941,78,0	0/0:29,0:29:81.11:0,81,775	0/0:15,0:15:39.05:0,39,376	0/0:10,0:10:21.03:0,21,203	0/0:45,0:45:99:0,114,1096	0/0:31,0:31:87.10:0,87,825	0/0:27,0:27:60.09:0,60,579	0/0:33,0:33:90.11:0,90,860	0/0:23,0:23:66.11:0,66,637	1/1:4,2:29:57.50:292,58,0	0/0:19,0:19:42.06:0,42,406	0/0:16,0:16:33.04:0,33,317	0/0:9,0:9:23.90:0,24,218	0/0:50,0:50:99:0,119,1135	0/0:15,0:15:45.06:0,45,430	0/0:13,0:13:30.05:0,30,290	0/0:27,0:27:69.10:0,69,666	0/0:13,0:13:33.03:0,33,313	0/0:22,0:22:48.07:0,48,464	0/0:22,0:22:54.08:0,54,521	0/0:14,0:14:39.06:0,39,376
chr10	1166652	.	GTT	G	782.24	PASS	AB=0.567;AC=7;AF=0.125;AN=56;BaseQRankSum=6.092;DP=429;FS=0.657;HRun=12;HaplotypeScore=56.7115;InbreedingCoeff=0.7524;MQ=69.94;MQ0=0;MQRankSum=-1.280;QD=11.34;ReadPosRankSum=-0.731;VQSLOD=1.4651;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,11:15:30.05:305,30,0	0/0:6,0:6:18.06:0,18,261	0/0:17,0:13:20.16:0,20,232	0/0:8,0:7:2.28:0,2,106	0/0:22,0:23:56.62:0,57,731	0/0:21,0:23:59.66:0,60,816	0/0:8,0:9:20.56:0,21,270	1/1:12,8:20:12.95:213,13,0	0/1:4,2:17:23.85:24,0,122	0/0:20,0:22:50.65:0,51,691	0/0:15,0:16:38.62:0,39,546	0/0:11,0:11:27.09:0,27,392	0/0:14,0:14:36.11:0,36,518	0/0:12,0:14:38.61:0,39,530	0/0:14,0:14:33.11:0,33,490	0/0:10,0:10:27.09:0,27,403	1/1:2,14:16:39.05:386,39,0	0/0:22,0:22:54.12:0,54,741	0/0:12,0:13:35.59:0,36,461	0/0:13,0:15:33.76:0,34,371	0/0:5,0:5:15.05:0,15,223	0/0:12,0:12:36.11:0,36,517	0/0:10,0:13:32.07:0,32,397	0/0:3,0:4:8.52:0,9,98	0/0:27,0:27:63.21:0,63,936	0/0:22,0:24:63.17:0,63,846	0/0:21,0:20:54.18:0,54,805	0/0:17,0:17:45.12:0,45,643
chr10	1171542	.	TCAAAA	T	2471.50	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.214;DP=695;FS=12.152;HRun=0;HaplotypeScore=129.9858;InbreedingCoeff=0.9790;MQ=76.56;MQ0=2;MQRankSum=-3.711;QD=36.35;ReadPosRankSum=-0.009;VQSLOD=2.7196;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,13:16:27.09:540,27,0	0/0:20,0:20:60.21:0,60,1717	0/0:29,0:27:67.15:0,67,1285	0/0:22,0:21:50.91:0,51,939	0/0:37,0:37:99:0,108,3092	0/0:22,0:22:51.17:0,51,1424	0/0:15,0:15:42.14:0,42,1174	1/1:3,14:17:42.14:818,42,0	0/0:18,0:18:48.16:0,48,1358	0/0:37,0:37:96.80:0,97,2808	0/0:28,0:28:78.27:0,78,2292	0/0:11,0:11:30.10:0,30,837	0/0:34,0:34:93.31:0,93,2520	0/0:19,0:19:57.16:0,57,1446	0/0:37,0:37:99:0,99,2809	0/0:30,0:30:75.26:0,75,2171	1/1:5,30:35:63.22:1257,63,0	0/0:21,0:21:57.20:0,57,1578	0/0:18,0:18:42.14:0,42,1219	0/0:33,0:33:96.32:0,96,2674	0/0:14,0:14:39.13:0,39,1126	0/0:27,0:27:69.24:0,69,2047	0/0:31,0:31:78.27:0,78,2205	0/0:15,0:15:42.13:0,42,1125	0/0:28,0:28:81.28:0,81,2319	0/0:37,0:37:99:0,102,2965	0/0:37,0:37:99:0,99,2673	0/0:4,0:4:9.03:0,9,270
chr10	1174157	.	AC	A	1583.12	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=8.000;DP=712;FS=0.000;HRun=1;HaplotypeScore=86.2332;InbreedingCoeff=0.8185;MQ=85.87;MQ0=0;MQRankSum=-3.244;QD=37.69;ReadPosRankSum=0.129;VQSLOD=3.8519;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,42:42:99:1678,120,0	0/0:9,0:9:24.08:0,24,383	0/0:23,1:24:47.76:0,48,916	0/0:28,0:28:80.03:0,80,1160	0/0:18,0:18:17.05:0,17,383	0/0:30,0:30:81.24:0,81,1233	0/0:27,0:27:78.23:0,78,1194	0/0:29,0:29:81.26:0,81,1252	0/0:19,0:19:54.18:0,54,847	0/0:13,0:13:24.02:0,24,357	0/0:26,0:26:51.86:0,52,855	0/0:30,0:30:84.28:0,84,1330	0/0:25,0:25:72.16:0,72,1105	0/0:27,0:27:75.25:0,75,1178	0/0:39,0:39:99:0,117,1863	0/0:40,0:40:99:0,114,1794	0/0:40,0:39:99:0,114,1725	0/0:21,0:21:63.18:0,63,971	0/0:15,0:15:45.14:0,45,677	0/0:28,0:28:62.84:0,63,922	0/0:48,0:48:99:0,141,2206	0/0:22,0:22:47.82:0,48,694	0/0:14,0:14:2.45:0,2,289	0/0:22,0:22:66.22:0,66,1039	0/0:19,0:19:51.09:0,51,691	0/0:26,0:26:72.21:0,72,1087	0/0:26,0:26:66.23:0,66,1053	0/0:5,0:5:15.05:0,15,240
chr10	1175527	.	CA	C	3804.05	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=12.150;DP=724;FS=2.269;HRun=2;HaplotypeScore=68.4328;InbreedingCoeff=0.9985;MQ=78.22;MQ0=0;MQRankSum=-2.169;QD=35.55;ReadPosRankSum=0.509;VQSLOD=4.0517;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:1,43:44:99:1577,123,0	0/0:21,0:21:63.21:0,63,944	0/0:25,0:25:69.54:0,70,1028	0/0:27,0:27:75.09:0,75,1049	0/0:31,0:31:93.30:0,93,1354	0/0:22,0:22:63.20:0,63,908	0/0:19,0:19:57.16:0,57,812	1/1:1,34:35:99:1254,99,0	0/0:20,0:20:36.18:0,36,720	0/0:29,0:29:87.29:0,87,1286	0/0:20,0:20:60.20:0,60,891	0/0:28,0:28:84.28:0,84,1258	0/0:25,0:25:75.20:0,75,1061	0/0:20,0:20:60.20:0,60,899	0/0:33,0:32:93.31:0,93,1392	0/0:25,0:25:72.23:0,72,1059	1/1:1,27:28:75.24:973,75,0	0/0:21,2:23:21.32:0,21,795	0/0:20,0:20:57.18:0,57,821	0/0:25,0:25:75.25:0,75,1124	0/0:23,0:23:69.21:0,69,993	0/0:41,0:41:99:0,123,1822	0/0:25,0:25:72.23:0,72,1057	0/0:30,0:30:90.25:0,90,1305	0/0:19,0:19:54.17:0,54,789	0/0:30,0:30:87.29:0,87,1304	0/0:23,0:23:69.23:0,69,1016	0/0:12,0:12:36.12:0,36,534
chr10	1176266	.	CG	C	1415.16	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.496;DP=894;FS=2.140;HRun=1;HaplotypeScore=80.7615;InbreedingCoeff=0.9994;MQ=83.88;MQ0=1;MQRankSum=-1.840;QD=32.91;ReadPosRankSum=2.096;VQSLOD=3.5730;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:57:99:0,172,2647	0/0:13,0:13:39.11:0,39,597	0/0:28,0:28:80.99:0,81,1102	0/0:26,0:26:72.06:0,72,1025	0/0:36,0:36:99:0,108,1713	0/0:37,0:37:99:0,111,1763	0/0:24,0:24:72.20:0,72,1119	0/0:38,0:38:99:0,114,1740	0/0:33,0:33:99:0,99,1496	0/0:38,0:38:99:0,114,1798	0/0:25,0:25:75.24:0,75,1170	0/0:37,0:37:99:0,108,1607	0/0:31,0:31:93.25:0,93,1414	0/0:30,0:30:90.26:0,90,1386	0/0:36,0:36:99:0,108,1671	0/0:36,0:36:99:0,108,1673	0/0:27,0:27:81.23:0,81,1264	0/0:18,0:18:48.16:0,48,766	0/0:19,0:19:54.18:0,54,857	0/0:45,0:45:99:0,135,2099	1/1:0,43:42:99:1510,108,0	0/0:40,0:40:99:0,117,1828	0/0:30,0:30:87.06:0,87,1322	0/0:27,0:27:75.21:0,75,1161	0/0:37,0:36:99:0,108,1711	0/0:33,0:33:99:0,99,1530	0/0:40,0:39:99:0,120,1858	0/0:10,0:10:30.10:0,30,473
chr10	1182063	.	TAC	T	124.34	PASS	AB=0.920;AC=9;AF=0.161;AN=56;BaseQRankSum=4.893;DP=645;FS=2.703;HRun=0;HaplotypeScore=87.5334;InbreedingCoeff=0.0579;MQ=58.57;MQ0=7;MQRankSum=-0.015;QD=0.57;ReadPosRankSum=-1.962;VQSLOD=1.5333;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:27:32.96:0,33,307	0/1:7,1:8:18.74:19,0,163	0/0:15,1:10:9.03:0,9,133	0/1:23,1:13:26.83:27,0,31	0/0:20,0:20:27.09:0,27,401	0/0:21,0:21:45.11:0,45,638	0/0:24,3:27:10.96:0,11,561	1/1:26,1:38:24.36:128,24,0	0/0:17,0:19:8.97:0,9,76	0/0:35,0:35:54.17:0,54,778	0/0:16,0:17:33.10:0,33,484	0/0:26,0:26:42.06:0,42,607	0/0:25,0:25:31.92:0,32,457	0/1:14,3:17:9.71:10,0,261	0/1:35,4:39:4.44:4,0,791	0/0:23,0:23:42.12:0,42,594	0/0:13,0:22:29.04:0,29,264	0/0:12,0:12:27.06:0,27,387	0/1:18,1:19:11.48:11,0,236	0/0:25,0:25:51.13:0,51,703	0/1:35,0:34:13.51:14,0,624	0/0:14,0:14:18.06:0,18,275	0/0:19,0:20:18.55:0,19,550	0/0:26,1:28:15.21:0,15,549	0/1:31,5:36:50.81:51,0,990	0/0:26,0:26:54.79:0,55,403	0/0:18,0:18:8.93:0,9,84	0/0:6,0:6:2.97:0,3,20
chr10	1182408	.	T	TAAAA	568.45	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-2.183;DP=576;FS=0.000;HRun=8;HaplotypeScore=92.7281;InbreedingCoeff=0.9951;MQ=82.63;MQ0=0;MQRankSum=-0.994;QD=47.37;ReadPosRankSum=-0.983;VQSLOD=2.7986;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:57.13:0,57,796	0/0:12,0:12:36.11:0,36,522	0/0:20,0:20:29.37:0,29,603	0/0:19,0:19:54.16:0,54,793	0/0:37,0:37:99:0,102,1495	0/0:29,0:29:75.22:0,75,1135	0/0:15,0:15:30.01:0,30,428	0/0:28,0:28:63.13:0,63,914	1/1:3,9:12:27.09:662,27,0	0/0:29,0:29:81.20:0,81,1167	0/0:20,0:20:60.20:0,60,908	0/0:21,0:21:57.17:0,57,862	0/0:22,0:22:36.54:0,37,794	0/0:16,0:16:45.13:0,45,659	0/0:18,0:18:45.14:0,45,681	0/0:25,0:25:69.20:0,69,1024	0/0:21,0:21:57.18:0,57,861	0/0:10,0:10:27.07:0,27,387	0/0:22,0:22:48.59:0,49,727	0/0:28,0:28:69.14:0,69,960	0/0:20,0:20:54.16:0,54,796	0/0:13,0:13:33.10:0,33,499	0/0:24,0:25:67.74:0,68,980	0/0:12,0:12:27.08:0,27,409	0/0:18,0:18:48.12:0,48,705	0/0:26,0:27:78.24:0,78,1159	0/0:26,0:26:72.22:0,72,1086	0/0:11,0:11:33.11:0,33,499
chr10	1184736	.	G	GAAA	3155.77	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-4.133;DP=563;FS=11.483;HRun=8;HaplotypeScore=86.7814;InbreedingCoeff=0.9950;MQ=64.74;MQ0=0;MQRankSum=-3.401;QD=43.83;ReadPosRankSum=-0.363;VQSLOD=2.3700;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:36.03:0,36,442	0/0:12,0:12:36.12:0,36,473	0/0:21,0:19:27.05:0,27,355	0/0:26,0:20:19.19:0,19,342	0/0:21,0:21:45.09:0,45,591	0/0:21,0:21:45.10:0,45,580	0/0:16,0:16:42.07:0,42,504	0/0:24,0:24:63.20:0,63,828	1/1:2,11:13:33.11:664,33,0	0/0:24,0:24:54.15:0,54,709	0/0:22,0:22:39.05:0,39,504	0/0:18,0:18:54.18:0,54,709	0/0:25,0:25:63.16:0,63,811	0/0:20,0:20:51.15:0,51,669	0/0:19,0:19:48.13:0,48,631	0/0:16,0:16:45.14:0,45,591	0/0:35,0:35:85.49:0,85,1101	0/0:29,0:29:78.04:0,78,979	0/0:15,0:15:33.08:0,33,425	0/0:17,0:17:39.11:0,39,506	0/0:23,0:23:57.15:0,57,748	0/0:15,0:15:30.06:0,30,380	0/0:17,0:17:48.14:0,48,630	0/0:12,0:12:30.08:0,30,390	0/0:21,0:21:57.17:0,57,747	1/1:12,16:28:29.77:1155,30,0	1/1:6,16:23:60.21:1162,60,0	1/1:4,2:6:18.06:334,18,0
chr10	1184818	.	A	AAGTTAAC	6807.44	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=8.754;DP=601;FS=7.321;HRun=0;HaplotypeScore=135.9910;InbreedingCoeff=0.9955;MQ=62.81;MQ0=3;MQRankSum=-10.847;QD=86.17;ReadPosRankSum=-0.051;VQSLOD=5.5712;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:72.17:0,72,1791	0/0:10,0:10:30.10:0,30,801	0/0:10,0:7:21.06:0,21,417	0/0:20,0:14:27.07:0,27,612	0/0:36,0:36:99:0,105,2732	0/0:27,0:27:78.27:0,78,2040	0/0:14,0:14:39.13:0,39,976	0/0:35,0:35:99:0,99,2375	1/1:6,6:11:21.06:738,21,0	0/0:29,0:28:81.26:0,81,2027	0/0:26,0:26:72.24:0,72,1838	0/0:9,0:9:27.09:0,27,728	0/0:29,0:29:87.24:0,87,2130	0/0:17,0:17:51.17:0,51,1332	0/0:17,0:17:48.16:0,48,1294	0/0:16,0:16:45.14:0,45,1157	0/0:29,0:29:81.28:0,81,2134	0/0:23,0:23:22.42:0,22,1356	0/0:19,0:19:54.19:0,54,1402	0/0:29,0:29:84.28:0,84,2203	0/0:24,0:24:72.25:0,72,1941	0/0:20,0:20:57.19:0,57,1476	0/0:21,0:21:63.20:0,63,1591	0/0:8,0:8:24.07:0,24,590	0/0:28,0:28:84.29:0,84,2240	1/1:4,14:22:60.19:1914,60,0	1/1:2,25:29:78.27:3004,78,0	1/1:4,11:14:30.10:1151,30,0
chr10	1185597	.	CAA	C	938.11	PASS	AB=0.520;AC=5;AF=0.089;AN=56;BaseQRankSum=7.491;DP=389;FS=9.386;HRun=10;HaplotypeScore=61.1496;InbreedingCoeff=0.7366;MQ=69.68;MQ0=0;MQRankSum=-3.859;QD=22.34;ReadPosRankSum=-0.575;VQSLOD=1.9808;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:48.10:0,48,709	0/0:7,0:7:15.05:0,15,238	0/0:19,0:18:38.96:0,39,512	0/0:6,0:5:12.04:0,12,191	0/0:20,0:20:54.17:0,54,832	0/0:12,0:12:33.11:0,33,524	0/0:6,0:6:9.03:0,9,143	0/0:30,0:31:80.74:0,81,1190	0/0:0,0:3:7.49:0,7,26	0/0:12,0:12:36.12:0,36,571	0/0:11,0:11:27.09:0,27,425	0/0:11,0:11:33.11:0,33,524	0/0:12,0:12:30.10:0,30,476	0/0:10,0:10:30.10:0,30,470	0/0:9,0:9:24.08:0,24,381	0/0:9,0:10:26.58:0,27,383	0/0:7,0:27:51.09:0,51,505	0/0:27,0:27:63.17:0,63,972	0/0:23,0:23:59.68:0,60,891	0/0:13,0:13:36.12:0,36,571	0/0:6,0:6:18.06:0,18,286	0/0:9,0:9:27.09:0,27,427	0/0:14,0:15:38.57:0,39,552	0/0:6,0:6:11.83:0,12,168	0/0:19,0:19:51.17:0,51,808	0/1:1,12:13:8.57:340,0,9	1/1:4,12:16:32.95:327,33,0	1/1:1,12:13:36.09:401,36,0
chr10	1185622	.	AAACT	A	1583.32	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=4.118;DP=334;FS=4.728;HRun=0;HaplotypeScore=64.6760;InbreedingCoeff=0.8085;MQ=71.05;MQ0=0;MQRankSum=-1.217;QD=28.27;ReadPosRankSum=-2.690;VQSLOD=2.4326;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,20:23:36.12:617,36,0	0/0:7,0:7:21.07:0,21,473	0/0:20,0:16:35.83:0,36,684	0/0:6,0:5:15.01:0,15,236	0/0:19,0:19:48.16:0,48,1161	0/0:13,0:13:39.13:0,39,910	0/0:3,0:3:6.02:0,6,131	1/1:7,23:29:66.20:1087,66,0	0/0:4,0:4:12.04:0,12,217	0/0:13,0:13:36.12:0,36,883	0/0:7,0:7:15.05:0,15,366	0/0:9,0:9:27.09:0,27,622	0/0:9,0:9:21.07:0,21,516	0/0:9,0:9:18.06:0,18,443	0/0:6,0:6:12.04:0,12,261	0/0:7,0:7:8.70:0,9,196	0/0:20,0:19:42.14:0,42,1009	0/0:20,0:20:51.18:0,51,1264	0/0:23,0:23:60.17:0,60,1287	0/0:12,0:12:27.09:0,27,673	0/0:6,0:6:18.03:0,18,355	0/0:8,0:8:12.04:0,12,249	0/0:8,0:8:18.06:0,18,460	0/1:3,0:3:0:0,0,0	0/0:16,0:16:48.16:0,48,1160	0/0:13,0:13:36.12:0,36,646	0/0:8,0:8:24.01:0,24,384	0/0:12,0:12:21.07:0,21,388
chr10	1185801	.	C	CA	1408.61	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-8.088;DP=460;FS=18.515;HRun=7;HaplotypeScore=49.2313;InbreedingCoeff=0.9816;MQ=63.58;MQ0=0;MQRankSum=1.274;QD=22.36;ReadPosRankSum=0.817;VQSLOD=1.9610;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:60.07:0,60,572	0/0:7,0:7:21.03:0,21,203	0/0:15,0:15:14.18:0,14,262	0/0:20,0:19:45.02:0,45,421	0/0:21,0:21:60.10:0,60,579	0/0:16,0:16:42.15:0,42,430	0/0:7,0:7:18.03:0,18,174	0/0:20,0:20:51.08:0,51,492	1/1:0,11:11:21.06:254,21,0	0/0:17,0:16:33.05:0,33,319	0/0:28,0:28:57.08:0,57,550	0/0:12,0:12:27.04:0,27,261	0/0:15,0:15:42.07:0,42,406	0/0:14,0:14:39.06:0,39,377	0/0:13,0:13:33.04:0,33,313	0/0:12,0:12:36.04:0,36,341	0/0:18,0:18:47.96:0,48,442	0/0:21,0:21:54.07:0,54,515	0/0:19,0:19:45.05:0,45,429	0/0:16,0:16:39.05:0,39,375	0/0:18,0:18:48.06:0,48,457	0/0:15,0:15:42.06:0,42,405	0/0:14,0:14:33.05:0,33,318	0/0:22,0:22:57.08:0,57,549	0/0:14,0:14:42.07:0,42,405	1/1:4,19:23:54.17:652,54,0	1/1:1,18:19:16.17:478,16,0	1/1:0,10:10:15.05:181,15,0
chr10	1186102	.	C	CA	11760.51	PASS	AB=0.750;AC=53;AF=0.946;AN=56;BaseQRankSum=-2.319;DP=333;FS=0.000;HRun=1;HaplotypeScore=83.0153;InbreedingCoeff=0.4436;MQ=35.20;MQ0=4;MQRankSum=-2.441;QD=35.96;ReadPosRankSum=2.118;VQSLOD=5.0807;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,5:6:18.06:267,18,0	1/1:1,5:6:15.05:224,15,0	0/1:4,2:3:22.90:39,0,23	0/0:5,1:2:3:0,3,27	1/1:0,12:12:23.90:333,24,0	1/1:5,14:18:48.08:659,48,0	1/1:1,14:13:30.10:442,30,0	1/1:2,10:12:32.93:445,33,0	1/1:0,13:13:39.13:582,39,0	1/1:0,13:11:30.10:449,30,0	1/1:3,14:17:37.12:392,37,0	1/1:0,13:13:30.10:442,30,0	1/1:0,12:13:36.10:504,36,0	1/1:0,10:10:30.10:449,30,0	1/1:2,14:16:45.15:671,45,0	1/1:2,11:13:33.11:492,33,0	1/1:3,5:8:15.05:224,15,0	1/1:1,10:11:30.02:421,30,0	1/1:4,12:13:36.12:538,36,0	1/1:1,14:15:42.06:578,42,0	1/1:1,9:10:24.08:359,24,0	1/1:0,16:16:45.02:597,45,0	1/1:1,13:14:38.94:498,39,0	1/1:1,5:6:18.02:244,18,0	1/1:3,6:9:21.07:313,21,0	1/1:0,18:18:54.14:745,54,0	1/1:0,15:15:45.15:673,45,0	1/1:1,4:5:12.93:181,13,0
chr10	1189045	.	AC	A	7426.01	PASS	AB=0.800;AC=53;AF=0.946;AN=56;BaseQRankSum=-2.879;DP=224;FS=12.831;HRun=3;HaplotypeScore=53.5441;InbreedingCoeff=0.3059;MQ=55.36;MQ0=0;MQRankSum=-2.957;QD=34.22;ReadPosRankSum=1.440;VQSLOD=4.2365;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,13:13:30.04:341,30,0	1/1:0,4:4:12.04:149,12,0	0/1:3,1:4:15.53:16,0,28	0/0:7,0:3:1.59:0,2,68	1/1:0,14:14:39.08:460,39,0	1/1:0,10:10:30.09:371,30,0	1/1:0,7:7:21.07:260,21,0	1/1:0,13:13:33.09:396,33,0	1/1:0,13:13:39.12:483,39,0	1/1:1,12:13:39.12:472,39,0	1/1:0,13:13:36.10:424,36,0	1/1:0,8:8:24.08:297,24,0	1/1:0,10:10:30.09:371,30,0	1/1:0,6:6:18.06:223,18,0	1/1:0,3:3:9.03:111,9,0	1/1:0,5:5:12.04:148,12,0	1/1:0,4:4:12.04:146,12,0	1/1:0,4:4:12.04:149,12,0	1/1:0,8:8:24.03:279,24,0	1/1:0,14:14:42.13:517,42,0	1/1:0,4:4:12.04:149,12,0	1/1:0,4:4:12.04:148,12,0	1/1:0,9:8:24.07:293,24,0	1/1:0,2:2:6.02:74,6,0	1/1:0,15:15:42.13:516,42,0	1/1:0,8:8:24.08:297,24,0	1/1:0,7:7:21.07:260,21,0	1/1:0,2:2:6.02:74,6,0
chr10	1190352	.	CT	C	6002.97	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=14.653;DP=691;FS=1.032;HRun=4;HaplotypeScore=61.9378;InbreedingCoeff=0.9997;MQ=78.51;MQ0=0;MQRankSum=-0.575;QD=32.27;ReadPosRankSum=-0.349;VQSLOD=5.1390;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,38:38:99:1221,102,0	0/0:18,0:18:54.15:0,54,721	0/0:23,0:23:60.20:0,60,820	0/0:10,0:10:27.07:0,27,346	0/0:35,0:35:99:0,99,1386	0/0:19,0:19:54.17:0,54,739	0/0:25,0:25:75.24:0,75,1033	1/1:4,31:35:93.28:1116,93,0	1/1:1,28:29:81.25:972,81,0	0/0:28,0:28:81.26:0,81,1105	0/0:29,0:29:81.26:0,81,1119	0/0:20,0:20:57.19:0,57,796	0/0:31,0:31:90.29:0,90,1245	0/0:29,0:29:84.27:0,84,1161	0/0:36,0:36:99:0,105,1453	0/0:16,0:16:48.15:0,48,656	1/1:1,24:25:63.19:756,63,0	0/0:20,0:20:60.20:0,60,840	0/0:21,0:21:60.20:0,60,840	0/0:35,0:35:99:0,102,1392	0/0:34,0:34:90.30:0,90,1259	0/0:15,0:15:45.14:0,45,614	0/0:23,0:23:66.22:0,66,921	0/0:13,0:13:39.13:0,39,546	0/0:25,0:25:72.24:0,72,1006	1/1:1,19:20:57.17:678,57,0	1/1:1,27:28:72.22:864,72,0	1/1:0,11:11:33.10:396,33,0
chr10	1190570	.	AT	A	869.69	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.561;DP=724;FS=10.560;HRun=1;HaplotypeScore=69.0487;InbreedingCoeff=0.9876;MQ=92.22;MQ0=0;MQRankSum=-3.902;QD=29.99;ReadPosRankSum=1.803;VQSLOD=2.2579;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,156,2365	0/0:7,0:7:21.07:0,21,335	0/0:29,0:29:87.24:0,87,1318	0/0:30,0:30:87.23:0,87,1314	0/0:34,0:34:99:0,102,1627	0/0:29,0:29:87.26:0,87,1340	0/0:22,0:22:66.22:0,66,1050	0/0:37,0:37:99:0,108,1703	0/0:26,0:26:78.27:0,78,1246	0/0:32,0:32:96.32:0,96,1497	0/0:20,0:20:60.19:0,60,935	0/0:23,0:23:69.21:0,69,1055	0/0:25,0:25:75.26:0,75,1196	0/0:30,0:30:90.29:0,90,1409	0/0:23,0:23:69.21:0,69,1055	0/0:26,0:26:75.26:0,75,1194	1/1:0,29:29:69.23:965,69,0	0/0:11,0:11:30.08:0,30,454	0/0:26,0:26:78.25:0,78,1218	0/0:27,0:27:81.25:0,81,1245	0/0:38,0:38:99:0,114,1788	0/0:14,0:14:42.14:0,42,669	0/0:23,0:23:69.19:0,69,1026	0/0:17,0:17:51.17:0,51,815	0/0:32,0:32:96.30:0,96,1488	0/0:36,0:36:99:0,108,1717	0/0:19,0:19:57.16:0,57,862	0/0:6,0:6:18.06:0,18,288
chr10	1191981	.	A	AG	2229.01	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-10.439;DP=724;FS=8.818;HRun=4;HaplotypeScore=68.5126;InbreedingCoeff=0.9964;MQ=78.45;MQ0=0;MQRankSum=-1.249;QD=28.22;ReadPosRankSum=-1.623;VQSLOD=2.1448;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,46:47:93.31:1270,93,0	0/0:10,0:10:30.09:0,30,340	0/0:23,0:22:20.92:0,21,424	0/0:18,0:16:42.03:0,42,439	0/0:37,0:37:99:0,108,1137	0/0:22,0:22:42.04:0,42,449	0/0:32,0:32:87.24:0,87,978	1/1:4,28:32:84.21:1080,84,0	0/0:22,0:22:66.17:0,66,739	0/0:26,0:26:69.15:0,69,749	0/0:17,0:17:48.12:0,48,528	0/0:25,0:25:66.18:0,66,741	0/0:26,0:26:69.14:0,69,746	0/0:22,0:22:60.17:0,60,680	0/0:34,0:34:81.21:0,81,897	0/0:17,0:17:40.92:0,41,438	0/0:27,0:27:75.19:0,75,833	0/0:29,0:29:81.15:0,81,881	0/0:27,0:27:66.13:0,66,705	0/0:26,0:26:75.20:0,75,842	0/0:20,0:20:42.07:0,42,444	0/0:32,0:32:84.19:0,84,931	0/0:31,0:31:87.21:0,87,954	0/0:33,0:33:84.12:0,84,898	0/0:16,0:16:39.10:0,39,428	0/0:32,0:32:87.25:0,87,987	0/0:32,0:31:84.19:0,84,924	0/0:9,0:9:24.07:0,24,272
chr10	1193692	.	ATGTCTCAGAG	A	928.50	PASS	AB=0.586;AC=1;AF=0.018;AN=56;BaseQRankSum=5.776;DP=602;FS=0.000;HRun=0;HaplotypeScore=181.0840;InbreedingCoeff=-0.0188;MQ=95.00;MQ0=0;MQRankSum=-3.688;QD=54.62;ReadPosRankSum=0.482;VQSLOD=3.4325;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:69.22:0,69,3266	0/0:6,0:6:15.05:0,15,687	0/0:24,0:23:51.18:0,51,2344	0/0:32,0:33:61.04:0,61,2505	0/0:22,0:22:60.21:0,60,2827	0/0:22,0:22:54.19:0,54,2502	0/0:19,0:19:42.13:0,42,1682	0/0:29,0:29:66.23:0,66,3184	0/0:25,0:25:69.24:0,69,3353	0/0:33,0:33:84.29:0,84,4139	0/0:23,0:23:63.22:0,63,3042	0/0:14,0:14:30.10:0,30,1489	0/0:28,0:28:78.27:0,78,3927	0/0:21,0:21:60.21:0,60,2771	0/0:20,0:20:60.21:0,60,2900	0/0:21,0:21:48.16:0,48,2442	0/1:5,12:17:99:1003,0,118	0/0:15,0:15:42.14:0,42,1954	0/0:18,0:18:48.16:0,48,2121	0/0:19,0:19:42.14:0,42,2083	0/0:21,0:21:57.20:0,57,2904	0/0:23,0:23:57.17:0,57,2799	0/0:18,0:18:54.19:0,54,2697	0/0:22,0:22:60.21:0,60,3087	0/0:20,0:20:57.20:0,57,2880	0/0:26,0:26:66.23:0,66,3225	0/0:22,0:22:60.21:0,60,3025	0/0:10,0:10:30.10:0,30,1545
chr10	1193752	.	CCAT	C	1354.40	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.075;DP=631;FS=1.516;HRun=0;HaplotypeScore=92.7859;InbreedingCoeff=0.9698;MQ=82.47;MQ0=0;MQRankSum=-4.451;QD=34.73;ReadPosRankSum=2.204;VQSLOD=3.9790;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,39:39:87.30:1449,87,0	0/0:4,0:4:12.04:0,12,272	0/0:24,0:24:66.23:0,66,1401	0/0:12,0:12:32.47:0,32,655	0/0:21,0:21:63.22:0,63,1423	0/0:17,0:17:48.16:0,48,1080	0/0:25,0:25:75.26:0,75,1700	0/0:34,0:34:84.29:0,84,1849	0/0:24,0:24:72.25:0,72,1605	0/0:34,0:34:93.32:0,93,2082	0/0:22,0:22:63.21:0,63,1352	0/0:23,0:23:69.24:0,69,1560	0/0:22,0:22:60.21:0,60,1341	0/0:28,0:28:81.28:0,81,1836	0/0:23,0:23:69.24:0,69,1556	0/0:26,0:26:78.27:0,78,1746	0/0:25,0:25:60.21:0,60,1358	0/0:19,0:19:54.19:0,54,1224	0/0:17,0:16:51.18:0,51,1149	0/0:24,0:24:69.24:0,69,1550	0/0:27,0:27:81.28:0,81,1782	0/0:24,0:24:72.25:0,72,1612	0/0:23,0:23:66.23:0,66,1494	0/0:19,0:19:51.16:0,51,1088	0/0:19,0:19:57.20:0,57,1249	0/0:25,0:25:75.24:0,75,1617	0/0:19,0:19:54.19:0,54,1223	0/0:12,0:12:33.11:0,33,734
chr10	1195256	.	TCACTTCAACCCCA	T	4419.43	PASS	AC=6;AF=0.111;AN=54;BaseQRankSum=9.663;DP=623;FS=66.031;HRun=0;HaplotypeScore=234.5400;InbreedingCoeff=0.9995;MQ=80.00;MQ0=0;MQRankSum=-7.892;QD=92.07;ReadPosRankSum=0.975;VQSLOD=2.6014;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,105,6544	0/0:15,0:15:39.13:0,39,2361	0/0:28,0:26:78.26:0,78,4145	0/0:32,0:32:79.15:0,79,4119	0/0:25,0:25:75.26:0,75,4721	0/0:18,0:18:54.19:0,54,3448	0/0:26,0:26:78.27:0,78,4969	0/0:18,0:18:54.18:0,54,3066	1/1:0,21:21:39.13:1633,39,0	0/0:19,0:19:57.19:0,57,3474	0/0:14,0:14:39.13:0,39,2527	0/0:21,0:21:63.22:0,63,3964	0/0:29,0:29:84.27:0,84,5213	0/0:29,0:29:75.26:0,75,4759	0/0:23,0:23:66.23:0,66,3948	0/0:25,0:25:72.25:0,72,4640	0/0:33,0:33:99:0,99,6154	0/0:24,0:24:72.23:0,72,4220	0/0:9,0:9:27.09:0,27,1801	0/0:15,0:15:45.14:0,45,2757	0/0:38,0:38:99:0,114,6594	0/0:17,0:17:45.15:0,45,2502	0/0:21,0:21:63.22:0,63,4206	0/0:34,0:34:99:0,99,6083	0/0:23,0:23:69.22:0,69,3935	1/1:0,13:13:36.10:1358,36,0	1/1:0,14:14:36.12:1428,36,0	./.
chr10	1195561	.	ATGGTTGGTTGATTGGT	A	5146.15	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=10.501;DP=715;FS=1.088;HRun=0;HaplotypeScore=302.8641;InbreedingCoeff=0.9985;MQ=68.62;MQ0=6;MQRankSum=-2.866;QD=67.71;ReadPosRankSum=1.106;VQSLOD=4.0107;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:80.47:0,80,3495	0/0:15,0:15:36.09:0,36,2136	0/0:42,0:32:49.68:0,50,978	0/0:29,0:26:52.33:0,52,1676	0/0:22,0:22:51.84:0,52,2200	0/0:23,0:23:60.16:0,60,3707	0/0:27,0:27:72.10:0,72,3807	0/0:31,0:31:83.74:0,84,2474	1/1:3,15:18:27.09:1226,27,0	0/0:33,0:33:77.19:0,77,4243	0/0:19,0:19:51.11:0,51,2973	0/0:17,0:17:42.16:0,42,2359	0/0:29,0:29:69.18:0,69,4001	0/0:21,0:21:56.37:0,56,2033	0/0:34,0:33:87.20:0,87,4474	0/0:20,0:20:54.15:0,54,3500	0/0:33,0:33:85.94:0,86,4460	0/0:30,0:30:78.21:0,78,4475	0/0:37,0:37:82.09:0,82,3427	0/0:24,0:24:56.90:0,57,2458	0/0:32,0:32:84.24:0,84,4201	0/0:17,0:17:48.15:0,48,3193	0/0:27,0:27:58.97:0,59,3053	0/0:16,0:16:45.07:0,45,2182	0/0:25,0:25:65.41:0,65,2290	1/1:4,23:27:67.72:1467,68,0	1/1:2,17:19:33.58:1499,34,0	1/1:1,11:12:21.07:954,21,0
chr10	1195572	.	A	ATTGG	2030.83	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=-5.595;DP=706;FS=0.000;HRun=0;HaplotypeScore=136.5344;InbreedingCoeff=0.8140;MQ=60.09;MQ0=13;MQRankSum=0.333;QD=18.30;ReadPosRankSum=0.555;VQSLOD=3.4555;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:20,17:39:42.14:942,42,0	0/0:12,0:12:27.09:0,27,408	0/0:40,0:25:5.97:0,6,47	0/1:36,0:26:1.56:2,0,19	0/0:20,0:20:27.08:0,27,398	0/0:22,0:22:48.16:0,48,756	0/0:25,0:25:51:0,51,769	0/0:35,0:34:27.04:0,27,305	0/0:15,0:15:26.40:0,26,231	0/0:32,0:32:51.15:0,51,749	0/0:19,0:18:29.22:0,29,473	0/0:16,0:16:30.10:0,30,473	0/0:27,0:27:57.13:0,57,809	0/0:21,0:21:27.07:0,27,402	0/0:31,0:31:63.19:0,63,949	0/0:20,0:20:42.12:0,42,621	1/1:14,20:36:54.10:1209,54,0	0/0:28,0:28:48.37:0,48,730	0/0:36,0:34:39.07:0,39,576	0/0:23,0:23:30.08:0,30,440	0/0:33,0:33:51.15:0,51,749	0/0:18,0:18:45.14:0,45,688	0/0:23,0:23:36.11:0,36,541	0/0:17,0:17:27.06:0,27,395	0/0:27,0:27:39.10:0,39,547	0/0:24,0:24:19.22:0,19,166	0/0:17,0:17:33.30:0,33,293	0/0:11,0:11:21.02:0,21,196
chr10	1196230	.	GCT	G	541.46	PASS	AB=0.974;AC=22;AF=0.423;AN=52;BaseQRankSum=6.489;DP=758;FS=6.400;HRun=0;HaplotypeScore=120.6191;InbreedingCoeff=0.0340;MQ=77.21;MQ0=39;MQRankSum=-3.773;QD=1.37;ReadPosRankSum=2.117;VQSLOD=1.9825;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:31:2.84:14,3,0	./.	0/0:72,0:31:0.47:0,0,1	./.	0/0:20,0:20:3:0,3,25	0/0:25,0:25:6.02:0,6,82	0/0:25,0:25:21.04:0,21,268	0/0:45,0:44:23.35:0,23,222	1/1:33,0:33:28.95:151,29,0	0/0:26,0:25:12.04:0,12,172	0/0:10,0:10:3:0,3,25	0/1:30,0:29:12.01:12,0,123	0/0:21,0:20:6.01:0,6,69	0/1:21,1:22:0.01:0,0,0	0/1:28,0:28:44.29:44,0,77	0/1:22,0:22:2.22:2,0,199	1/1:11,0:16:14.20:70,14,0	0/1:15,1:15:16.13:16,0,133	1/1:25,0:23:3:25,3,0	0/1:15,0:15:0:0,0,0	0/1:31,2:31:20.42:20,0,77	0/1:22,1:23:26.40:26,0,38	0/1:20,0:19:13.33:18,0,13	0/1:22,3:24:75.16:75,0,156	0/0:16,0:16:6.02:0,6,88	0/1:26,0:23:9.72:89,0,10	1/1:15,0:15:22.72:112,23,0	0/1:13,0:10:16.19:16,0,41
chr10	1196256	.	TCTCTCTCTCTC	T	1102.39	PASS	AB=0.830;AC=3;AF=0.054;AN=56;BaseQRankSum=7.937;DP=772;FS=1.873;HRun=0;HaplotypeScore=230.1434;InbreedingCoeff=-0.0663;MQ=48.28;MQ0=51;MQRankSum=-5.566;QD=17.50;ReadPosRankSum=3.686;VQSLOD=2.0969;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:32:46.91:0,47,704	0/0:9,0:9:18.03:0,18,387	0/0:44,0:6:10.08:0,10,116	0/0:62,0:7:2.30:0,2,138	0/0:25,0:25:57.66:0,58,1381	0/0:24,0:24:45.15:0,45,1475	0/0:31,0:31:71.68:0,72,2294	0/0:41,0:39:99:0,110,2516	0/0:36,0:36:62.75:0,63,1170	0/0:20,0:18:54.18:0,54,1858	0/0:11,0:11:27.09:0,27,699	0/0:30,0:28:68:0,68,2071	0/0:26,0:24:60.20:0,60,1617	0/0:27,0:27:60.10:0,60,2162	0/0:33,0:33:84.73:0,85,2564	0/0:28,0:28:75.72:0,76,2182	0/0:25,0:23:46.72:0,47,1439	0/0:19,0:17:43.39:0,43,1413	0/0:26,0:21:60.16:0,60,1405	0/0:15,0:14:24.35:0,24,682	0/0:35,0:33:69.62:0,70,2201	0/0:35,0:34:74.98:0,75,1648	0/0:20,0:18:42.14:0,42,1165	0/0:29,0:28:69.24:0,69,2596	0/0:25,0:25:63.19:0,63,1926	0/1:21,5:23:99:485,0,540	0/1:11,8:18:99:583,0,235	0/1:17,1:14:99:134,0,396
chr10	1196423	.	G	GTC	1878.85	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-0.010;DP=706;FS=2.772;HRun=0;HaplotypeScore=93.3180;InbreedingCoeff=0.9749;MQ=61.62;MQ0=13;MQRankSum=-6.534;QD=25.05;ReadPosRankSum=-1.559;VQSLOD=4.0837;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:52.07:0,52,667	0/0:11,0:11:27.09:0,27,337	0/0:41,0:12:9.03:0,9,108	0/0:67,0:25:27.03:0,27,256	0/0:21,0:21:54.15:0,54,651	0/0:22,0:22:57.16:0,57,686	0/0:28,0:28:66.21:0,66,824	0/0:27,0:27:54.15:0,54,650	1/1:2,13:15:27.09:445,27,0	0/0:27,0:27:60.08:0,60,729	0/0:12,0:12:27.09:0,27,337	0/0:24,0:24:60.17:0,60,735	0/0:23,0:23:60.17:0,60,729	0/0:24,0:24:60.06:0,60,727	0/0:30,0:30:82.48:0,82,1000	0/0:21,0:21:54.15:0,54,660	0/0:31,0:31:71.91:0,72,850	0/0:23,0:23:48.08:0,48,567	0/0:24,0:20:51.14:0,51,620	0/0:16,0:16:42.12:0,42,511	0/0:38,0:38:84.26:0,84,1047	0/0:24,0:24:66.15:0,66,771	0/0:21,0:21:51.14:0,51,616	0/0:29,0:29:66.18:0,66,816	0/0:21,0:21:60.18:0,60,736	1/1:8,18:25:16.13:715,16,0	1/1:4,14:18:39.10:638,39,0	1/1:4,11:15:15.05:239,15,0
chr10	1196507	.	G	GTCTC	3160.14	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-3.553;DP=660;FS=0.000;HRun=0;HaplotypeScore=127.7835;InbreedingCoeff=0.9533;MQ=60.50;MQ0=8;MQRankSum=-4.031;QD=20.79;ReadPosRankSum=-2.727;VQSLOD=2.4082;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,23:30:36.12:892,36,0	0/0:8,0:8:18.06:0,18,300	0/0:31,0:13:17.35:0,17,219	0/0:48,0:24:14.11:0,14,341	0/0:25,0:27:63.19:0,63,999	0/0:18,0:18:39.11:0,39,601	0/0:28,0:29:59.67:0,60,998	1/1:16,18:36:59.67:878,60,0	1/1:10,0:10:8.78:52,9,0	0/0:23,0:24:63.15:0,63,1004	0/0:16,0:18:45.14:0,45,698	0/0:23,0:23:51.14:0,51,796	0/0:24,0:26:63.20:0,63,1016	0/0:21,0:21:35.11:0,35,889	0/0:25,0:26:57.10:0,57,827	0/0:20,0:21:48.13:0,48,728	1/1:13,18:32:50.91:1206,51,0	0/0:30,0:30:75.70:0,76,1228	0/0:15,0:15:33.10:0,33,512	0/0:12,0:14:30.06:0,30,408	0/0:25,0:25:51.15:0,51,819	0/0:24,0:24:57.18:0,57,932	0/0:18,0:18:39.13:0,39,627	0/0:34,0:38:84.22:0,84,1326	0/0:23,0:23:51.17:0,51,852	1/1:20,0:20:13.71:110,14,0	1/1:13,0:13:6.21:31,6,0	1/1:8,0:8:12.04:182,12,0
chr10	1196597	.	TACAGTAA	T	3543.17	PASS	AB=0.538;AC=7;AF=0.125;AN=56;BaseQRankSum=11.200;DP=554;FS=18.854;HRun=0;HaplotypeScore=131.5937;InbreedingCoeff=0.8293;MQ=58.96;MQ0=1;MQRankSum=-10.679;QD=73.82;ReadPosRankSum=2.118;VQSLOD=3.1201;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:81.28:0,81,3374	0/0:11,0:11:33.11:0,33,1325	0/0:11,0:6:15.05:0,15,605	0/0:24,0:20:56.78:0,57,1794	0/0:26,0:26:78.25:0,78,3031	0/0:19,0:19:57.20:0,57,2308	0/0:20,0:20:60.21:0,60,2400	0/0:33,0:30:87.30:0,87,3524	1/1:0,10:10:30.10:718,30,0	0/0:21,0:21:60.21:0,60,2414	0/0:18,0:18:54.19:0,54,2207	0/0:20,0:20:60.21:0,60,2412	0/0:29,0:29:87.30:0,87,3560	0/0:21,0:21:63.22:0,63,2641	0/0:25,0:25:75.26:0,75,3117	0/0:13,0:13:39.13:0,39,1512	0/0:24,0:24:66.23:0,66,2771	0/0:14,0:14:42.14:0,42,1741	0/0:24,0:21:63.22:0,63,2522	0/0:25,0:24:72.23:0,72,2725	0/0:19,0:19:57.20:0,57,2335	0/0:20,0:20:60.21:0,60,2470	0/0:14,0:14:42.13:0,42,1539	0/0:20,0:20:60.21:0,60,2497	0/0:27,0:27:81.26:0,81,3199	0/1:2,12:14:99:926,0,210	1/1:0,18:18:54.19:1447,54,0	1/1:0,6:6:18.06:452,18,0
chr10	1196607	.	AT	A	1610.15	PASS	AB=0.531;AC=7;AF=0.125;AN=56;BaseQRankSum=11.597;DP=590;FS=12.207;HRun=2;HaplotypeScore=75.5035;InbreedingCoeff=0.8347;MQ=57.99;MQ0=0;MQRankSum=-9.665;QD=28.75;ReadPosRankSum=1.254;VQSLOD=2.0872;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:87.30:0,87,1385	0/0:11,0:11:33.11:0,33,527	0/0:15,0:9:24.08:0,24,384	0/0:22,0:18:51.17:0,51,773	0/0:26,0:26:75.26:0,75,1199	0/0:24,0:24:72.23:0,72,1119	0/0:22,0:22:63.21:0,63,1003	0/0:40,0:37:99:0,105,1622	1/1:0,10:10:26.75:299,27,0	0/0:21,0:21:63.21:0,63,1007	0/0:20,0:20:60.19:0,60,936	0/0:21,0:21:63.21:0,63,1001	0/0:30,0:30:90.31:0,90,1436	0/0:24,0:24:72.21:0,72,1100	0/0:25,0:25:72.25:0,72,1147	0/0:13,0:13:39.13:0,39,623	0/0:25,0:25:72.22:0,72,1119	0/0:15,0:15:45.15:0,45,719	0/0:26,0:24:72.25:0,72,1144	0/0:22,0:21:63.21:0,63,1007	0/0:18,0:18:54.18:0,54,863	0/0:21,0:21:63.18:0,63,957	0/0:14,0:14:42.14:0,42,667	0/0:20,0:20:57.19:0,57,909	0/0:30,0:30:90.27:0,90,1385	0/1:2,15:17:47.83:466,0,48	1/1:3,18:21:62.78:767,63,0	1/1:2,6:8:22.60:226,23,0
chr10	1204340	.	A	AT	546.06	PASS	AB=1.000;AC=3;AF=0.056;AN=54;BaseQRankSum=-4.016;DP=509;FS=3.889;HRun=10;HaplotypeScore=52.7596;InbreedingCoeff=0.6003;MQ=53.41;MQ0=27;MQRankSum=-0.168;QD=11.62;ReadPosRankSum=0.339;VQSLOD=2.7963;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	0/0:5,0:5:14.98:0,15,123	0/0:14,0:3:5.99:0,6,49	0/1:15,0:8:2.71:3,0,61	0/0:22,0:19:44.95:0,45,369	0/0:30,0:29:53.92:0,54,443	0/0:15,0:14:35.95:0,36,295	0/0:26,0:25:61.59:0,62,487	0/0:12,0:12:23.97:0,24,197	0/0:28,1:27:35.97:0,36,491	0/0:18,0:17:38.91:0,39,314	0/0:11,0:10:26.97:0,27,222	0/0:18,0:18:35.95:0,36,295	0/0:12,0:12:17.01:0,17,129	0/0:26,0:26:56.81:0,57,458	0/0:16,0:16:35.95:0,36,293	1/1:8,24:32:60.15:640,60,0	0/0:17,0:17:30.32:0,30,352	0/0:23,0:20:53.90:0,54,440	0/0:24,1:23:36.94:0,37,507	0/0:8,0:8:23.97:0,24,197	0/0:15,0:14:32.96:0,33,271	0/0:16,1:16:3.96:0,4,239	0/0:26,0:26:62.92:0,63,517	0/0:22,0:19:41.93:0,42,342	0/0:23,0:22:53.90:0,54,443	0/0:17,0:15:29.94:0,30,246	0/0:10,0:10:26.96:0,27,222
chr10	1205720	.	GGC	G	2706.66	PASS	AB=0.925;AC=26;AF=0.464;AN=56;BaseQRankSum=-5.841;DP=466;FS=0.894;HRun=0;HaplotypeScore=83.7426;InbreedingCoeff=-0.4569;MQ=62.21;MQ0=6;MQRankSum=-0.519;QD=7.24;ReadPosRankSum=-1.042;VQSLOD=3.1412;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,0:9:8.94:91,9,0	0/1:12,3:15:99:131,0,101	0/1:26,0:13:1.04:1,0,34	0/0:34,0:14:20.60:0,21,169	0/1:25,0:25:31.84:32,0,60	0/1:12,3:15:99:157,0,109	0/1:19,3:22:99:128,0,172	1/1:17,0:17:38.69:271,39,0	0/1:12,0:12:12.29:12,0,49	0/0:23,0:23:35.86:0,36,669	0/0:15,0:15:37.79:0,38,520	0/1:10,1:11:39.57:116,0,40	0/1:10,1:11:63.51:64,0,101	0/1:8,0:8:35.80:36,0,51	0/1:16,2:18:88.64:164,0,89	0/1:15,1:16:99:129,0,113	1/1:6,0:5:2.97:20,3,0	0/0:14,0:13:31.71:0,32,424	0/1:27,2:27:49.99:364,0,50	0/1:9,0:9:64.97:84,0,65	0/1:16,2:18:68.61:172,0,69	0/1:11,0:11:52.46:55,0,52	0/0:6,0:6:4.81:0,5,39	0/1:16,4:20:99:213,0,113	0/1:16,2:18:99:128,0,135	0/1:15,2:17:96.68:192,0,97	0/1:21,0:21:84.38:84,0,151	0/1:14,4:18:99:226,0,108
chr10	1205721	.	GCGC	G	143.46	PASS	AB=0.744;AC=5;AF=0.089;AN=56;BaseQRankSum=5.822;DP=473;FS=6.060;HRun=0;HaplotypeScore=103.1116;InbreedingCoeff=0.2804;MQ=60.99;MQ0=6;MQRankSum=-5.057;QD=2.43;ReadPosRankSum=-1.042;VQSLOD=0.8399;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:4,4:9:18.13:23,0,18	0/0:16,0:16:37.31:0,37,576	0/1:26,0:12:21.31:21,0,351	0/0:32,0:14:23.40:0,23,437	0/0:27,0:26:27.05:0,27,452	0/0:16,0:16:39.82:0,40,556	0/0:22,0:22:45.74:0,46,765	0/1:6,11:17:6.09:192,0,6	0/0:12,0:12:33.07:0,33,505	0/0:23,0:23:69.02:0,69,1384	0/0:16,0:16:39.12:0,39,886	0/0:11,0:11:22.28:0,22,325	0/0:11,0:11:29.27:0,29,504	0/0:7,0:7:15:0,15,249	0/0:19,0:19:45.52:0,46,665	0/0:16,0:16:44.24:0,44,689	1/1:5,1:5:2.94:18,3,0	0/0:15,0:14:42.12:0,42,858	0/0:27,0:25:64.29:0,64,746	0/0:10,0:10:29.85:0,30,401	0/0:18,0:18:43.93:0,44,645	0/0:12,0:12:16.25:0,16,245	0/0:7,0:7:8.73:0,9,146	0/0:20,0:20:42.73:0,43,673	0/0:19,0:19:46.55:0,47,752	0/0:18,0:18:47.25:0,47,677	0/0:20,0:20:56.96:0,57,882	0/0:18,0:18:41.46:0,41,558
chr10	1205725	.	G	GCT	446.32	PASS	AB=0.867;AC=10;AF=0.179;AN=56;BaseQRankSum=-0.199;DP=511;FS=6.309;HRun=0;HaplotypeScore=109.3712;InbreedingCoeff=0.1420;MQ=62.23;MQ0=8;MQRankSum=2.971;QD=2.76;ReadPosRankSum=-1.598;VQSLOD=1.7206;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:13:8.36:0,8,39	0/0:15,0:15:26.99:0,27,183	0/1:28,0:12:6.22:6,0,77	0/1:39,0:18:14.68:15,0,225	0/1:12,13:25:46.74:161,0,47	0/0:19,0:19:35.27:0,35,230	0/0:24,0:24:40.81:0,41,272	1/1:18,0:17:0.46:19,0,0	0/1:6,5:11:36.04:248,0,36	0/0:22,0:22:65.90:0,66,868	0/0:18,0:18:38.59:0,39,525	0/0:11,0:12:18.36:0,18,110	0/0:13,0:13:20.97:0,21,141	0/0:6,0:6:9.41:0,9,64	0/0:19,0:20:15.99:0,16,207	0/0:18,0:18:32.47:0,32,212	1/1:9,0:8:8.81:66,9,0	0/0:16,0:15:39.01:0,39,531	0/0:27,0:25:8.15:0,8,191	0/0:13,0:13:13.97:0,14,121	0/1:20,1:21:39.16:39,0,125	0/0:9,0:11:11.75:0,12,81	0/1:9,1:10:31.39:31,0,72	0/0:21,0:22:39.94:0,40,262	0/0:23,0:23:31.80:0,32,223	0/0:18,0:19:39.59:0,40,224	0/0:19,0:19:33.80:0,34,225	0/0:18,0:18:35.18:0,35,228
chr10	1205911	.	C	CT	1437.83	PASS	AB=0.762;AC=6;AF=0.107;AN=56;BaseQRankSum=-7.583;DP=554;FS=1.067;HRun=11;HaplotypeScore=55.9620;InbreedingCoeff=0.5529;MQ=64.82;MQ0=0;MQRankSum=-2.989;QD=13.83;ReadPosRankSum=-1.615;VQSLOD=3.2711;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,16:23:26.66:431,27,0	0/0:5,0:5:14.94:0,15,116	0/1:14,1:11:15.47:15,0,77	0/0:16,0:11:17.37:0,17,119	0/0:28,1:30:67.68:0,68,510	0/0:19,0:19:50.49:0,50,383	0/0:19,0:19:50.78:0,51,392	1/1:13,26:39:75.14:754,75,0	0/0:11,0:11:29.88:0,30,232	0/0:16,0:16:26.86:0,27,209	0/0:17,1:18:8.39:0,8,248	0/0:19,0:19:23.91:0,24,324	0/0:12,0:13:34.91:0,35,261	0/0:8,0:10:19.97:0,20,145	0/0:18,0:19:43.86:0,44,328	0/0:18,0:18:47.81:0,48,371	0/1:8,19:27:38.35:373,0,38	0/0:23,0:24:60.81:0,61,450	0/0:26,1:28:25.36:0,25,370	0/0:26,1:27:32.28:0,32,434	0/0:14,0:14:38.85:0,39,302	0/0:15,0:15:36.72:0,37,279	0/0:18,0:19:37.85:0,38,281	0/0:21,0:21:53.72:0,54,408	0/0:17,1:18:11.39:0,11,271	0/0:27,0:27:56.75:0,57,440	0/0:32,0:33:79.65:0,80,609	0/0:10,1:11:2.44:0,2,202
chr10	1205976	.	CTAGCTGGGTGAGA	C	1040.29	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.410;DP=551;FS=0.000;HRun=0;HaplotypeScore=189.3477;InbreedingCoeff=0.9956;MQ=61.63;MQ0=0;MQRankSum=-4.912;QD=49.54;ReadPosRankSum=-0.775;VQSLOD=2.7648;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,16:20:33.09:1135,33,0	0/0:9,0:9:27.09:0,27,1766	0/0:20,0:16:39.13:0,39,1621	0/0:14,0:12:33.08:0,33,1038	0/0:20,0:20:57.20:0,57,3376	0/0:23,0:23:69.24:0,69,4440	0/0:10,0:10:30.10:0,30,1821	0/0:27,0:27:78.25:0,78,4460	0/0:16,0:16:48.16:0,48,3063	0/0:17,0:17:48.16:0,48,2943	0/0:17,0:17:48.16:0,48,3148	0/0:20,0:20:60.21:0,60,3838	0/0:25,0:25:69.24:0,69,4099	0/0:13,0:13:39.13:0,39,2585	0/0:30,0:30:90.31:0,90,5888	0/0:16,0:16:48.16:0,48,3200	0/0:24,0:23:66.23:0,66,4061	0/0:13,0:13:39.13:0,39,2371	0/0:19,0:18:54.18:0,54,2898	0/0:26,0:26:75.26:0,75,4763	0/0:24,0:24:72.25:0,72,4439	0/0:11,0:11:24.08:0,24,1462	0/0:12,0:12:36.12:0,36,2297	0/0:24,0:24:72.25:0,72,4687	0/0:24,0:24:63.19:0,63,3575	0/0:31,0:31:93.32:0,93,5975	0/0:30,0:30:90.30:0,90,5269	0/0:15,0:15:45.15:0,45,2758
chr10	1208595	.	C	CA	1096.63	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-8.879;DP=618;FS=5.152;HRun=1;HaplotypeScore=52.6280;InbreedingCoeff=0.8075;MQ=57.73;MQ0=18;MQRankSum=-5.353;QD=31.33;ReadPosRankSum=-4.355;VQSLOD=1.9053;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:66.20:0,66,843	0/0:2,0:2:6.02:0,6,78	0/0:32,0:4:9.03:0,9,109	0/0:38,0:7:17.27:0,17,193	0/0:16,0:16:45.13:0,45,569	0/0:15,0:14:39.13:0,39,502	0/0:21,0:21:45.15:0,45,584	1/1:3,32:30:84.24:1191,84,0	0/0:28,0:26:69.22:0,69,889	0/0:18,0:18:48.14:0,48,609	0/0:5,0:5:9.03:0,9,117	0/0:26,0:26:78.25:0,78,1012	0/0:23,0:23:63.20:0,63,815	0/0:25,0:25:69.18:0,69,876	0/0:26,0:26:72.23:0,72,934	0/0:20,0:20:54.16:0,54,685	0/0:41,0:35:87.20:0,87,1077	0/0:22,0:22:51.17:0,51,662	0/0:10,0:9:21.07:0,21,273	0/0:15,0:15:36.12:0,36,467	0/0:40,0:39:99:0,108,1375	0/0:9,0:9:27.09:0,27,350	0/0:16,0:16:39.13:0,39,506	0/0:27,0:27:75.24:0,75,973	0/0:25,0:25:75.24:0,75,971	0/0:18,0:16:48.16:0,48,623	0/0:20,0:20:60.20:0,60,778	0/0:16,0:16:48.09:0,48,587
chr10	1209494	.	C	CT	438.72	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.043;DP=684;FS=2.728;HRun=1;HaplotypeScore=67.4098;InbreedingCoeff=0.9970;MQ=51.48;MQ0=18;MQRankSum=4.654;QD=13.71;ReadPosRankSum=3.214;VQSLOD=3.0987;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,21:30:26.43:533,26,0	0/0:10,0:10:27.02:0,27,334	0/0:36,0:12:35.69:0,36,442	0/0:37,0:14:29.76:0,30,367	0/0:24,0:24:69.19:0,69,933	0/0:20,0:19:51.16:0,51,695	0/0:21,0:21:63.21:0,63,870	0/0:26,0:19:54.06:0,54,603	0/0:25,0:23:66.19:0,66,873	0/0:26,0:25:63.10:0,63,843	0/0:17,0:17:42.09:0,42,549	0/0:20,0:20:60.19:0,60,821	0/0:23,0:22:63.16:0,63,841	0/0:24,0:24:70.78:0,71,952	0/0:29,0:29:87.29:0,87,1212	0/0:31,0:31:87.27:0,87,1165	0/0:25,0:25:75.20:0,75,1008	0/0:24,0:24:66.21:0,66,905	0/0:18,0:14:42.07:0,42,503	0/0:37,0:37:99:0,105,1405	0/0:25,0:25:72.19:0,72,937	0/0:21,0:21:63.12:0,63,834	0/0:20,0:19:54.18:0,54,752	0/0:22,0:22:60.20:0,60,839	0/0:32,0:31:93.27:0,93,1274	0/0:25,0:24:69.21:0,69,931	0/0:20,0:20:60.18:0,60,818	0/0:14,0:14:42.13:0,42,569
chr10	1209496	.	C	CCT	652.95	PASS	AB=0.596;AC=1;AF=0.018;AN=56;BaseQRankSum=7.159;DP=684;FS=1.712;HRun=0;HaplotypeScore=80.6311;InbreedingCoeff=0.0050;MQ=51.67;MQ0=17;MQRankSum=4.037;QD=21.06;ReadPosRankSum=4.062;VQSLOD=4.0277;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:10,21:29:19.27:727,0,19	0/0:11,0:11:26.71:0,27,326	0/0:35,0:13:35.14:0,35,439	0/0:33,0:14:29.84:0,30,339	0/0:24,0:24:69.19:0,69,987	0/0:21,0:20:54.13:0,54,767	0/0:22,0:22:66.21:0,66,944	0/0:27,0:20:48.02:0,48,522	0/0:25,0:23:60.19:0,60,873	0/0:24,0:23:63.16:0,63,883	0/0:17,0:17:45.08:0,45,624	0/0:20,0:20:57.19:0,57,847	0/0:23,0:22:63.16:0,63,879	0/0:25,0:25:68.04:0,68,966	0/0:30,0:30:87.29:0,87,1280	0/0:31,0:31:84.26:0,84,1202	0/0:26,0:25:74.04:0,74,1072	0/0:24,0:24:69.18:0,69,984	0/0:17,0:15:39.06:0,39,492	0/0:35,0:35:99:0,102,1437	0/0:23,0:23:63.19:0,63,898	0/0:22,0:22:57.19:0,57,852	0/0:21,0:20:54.18:0,54,809	0/0:22,0:22:60.20:0,60,881	0/0:32,0:31:90.30:0,90,1322	0/0:27,0:26:72.22:0,72,1032	0/0:21,0:21:60.19:0,60,878	0/0:14,0:14:42.13:0,42,579
chr10	1220301	.	A	AGTTCT	1165.34	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=0.980;DP=575;FS=2.063;HRun=0;HaplotypeScore=112.4096;InbreedingCoeff=0.9811;MQ=57.27;MQ0=5;MQRankSum=-6.642;QD=58.27;ReadPosRankSum=-1.861;VQSLOD=3.8691;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,9:16:33.07:914,33,0	0/0:9,0:9:21.07:0,21,425	0/0:18,0:12:34.93:0,35,711	0/0:16,0:15:38.95:0,39,714	0/0:25,0:25:60.20:0,60,1257	0/0:21,0:21:51.18:0,51,1107	0/0:19,0:19:54.18:0,54,1147	1/1:2,2:4:12.04:367,12,0	0/0:15,0:15:36.12:0,36,752	0/0:16,0:16:45.14:0,45,934	0/0:19,0:19:51.18:0,51,1106	0/0:30,0:30:51.18:0,51,1107	0/0:23,0:23:44.93:0,45,966	0/0:25,0:25:60.18:0,60,1199	0/0:26,0:26:57.20:0,57,1221	0/0:25,0:25:48.16:0,48,1007	0/0:23,0:23:66.23:0,66,1404	0/0:20,0:20:47.68:0,48,1004	0/0:21,0:20:54.19:0,54,1157	0/0:13,0:13:36.12:0,36,766	0/0:36,0:36:99:0,99,2117	0/0:22,0:22:57.19:0,57,1161	0/0:11,0:11:29.83:0,30,584	0/0:24,0:24:63.22:0,63,1350	0/0:25,0:25:51.18:0,51,1106	0/0:31,0:31:59.87:0,60,1921	0/0:29,0:29:77.88:0,78,1641	0/0:13,0:13:36.12:0,36,782
chr10	1234394	.	ATAAAG	A	130.50	PASS	AC=4;AF=1.00;AN=4;DP=114;FS=0.000;HRun=0;HaplotypeScore=4.9712;MQ=7.84;MQ0=84;QD=5.93;VQSLOD=0.4740;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	./.	./.	./.	1/1:10,9:3:9.03:132,9,0	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	1/1:2,1:1:3.01:63,3,0	./.	./.
chr10	1247171	.	C	CTG	220	PASS	AB=0.872;AC=12;AF=0.261;AN=46;BaseQRankSum=-1.466;DP=580;FS=1.145;HRun=0;HaplotypeScore=95.8950;InbreedingCoeff=0.2505;MQ=34.33;MQ0=156;MQRankSum=-0.268;QD=1.58;ReadPosRankSum=-1.968;VQSLOD=1.7376;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:26:2.74:12,3,0	0/0:7,0:6:5.97:0,6,52	./.	./.	0/0:13,0:9:2.90:0,3,32	1/1:10,0:9:2.99:24,3,0	0/0:23,0:14:6.01:0,6,64	./.	0/1:17,0:16:22.72:23,0,43	0/0:14,0:6:5.99:0,6,51	0/0:18,0:13:5.85:0,6,46	0/0:21,0:20:17.84:0,18,160	./.	0/0:17,0:15:18.02:0,18,184	0/0:27,0:21:14.85:0,15,131	0/1:12,2:10:29.02:29,0,113	0/0:28,0:27:17.04:0,17,182	0/1:21,1:18:32.31:32,0,67	0/0:11,0:5:6.01:0,6,63	0/0:14,0:7:12.03:0,12,129	0/0:43,0:31:24.28:0,24,216	./.	0/0:20,0:15:8.98:0,9,83	0/0:22,0:23:20.78:0,21,188	0/0:14,0:11:8.28:0,8,46	1/1:17,0:11:8.96:74,9,0	1/1:7,4:9:3.01:44,3,0	0/1:8,8:15:20.09:118,0,20
chr10	1247612	.	AGCCAGCCACAGCCCCTG	A	455.62	PASS	AC=4;AF=0.100;AN=40;BaseQRankSum=3.485;DP=425;FS=0.000;HRun=0;HaplotypeScore=78.4706;InbreedingCoeff=0.3836;MQ=23.22;MQ0=177;MQRankSum=-0.017;QD=10.35;ReadPosRankSum=0.116;VQSLOD=1.1946;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:24,7:22:2.13:136,2,0	0/0:8,0:8:3.01:0,3,145	./.	./.	./.	0/0:11,0:11:6.02:0,6,315	0/0:28,0:18:15.78:0,16,523	0/0:16,0:6:5.97:0,6,45	1/1:8,5:9:9.03:413,9,0	0/0:20,0:15:12.04:0,12,632	./.	0/0:13,0:8:6.02:0,6,478	0/0:12,0:9:5.56:0,6,451	0/0:11,0:9:9.03:0,9,477	0/0:7,0:2:0.47:0,0,1	0/0:12,0:6:9.03:0,9,602	0/0:23,0:6:1.25:0,1,3	0/0:23,0:9:6.02:0,6,479	0/0:13,0:6:3.01:0,3,240	./.	0/0:44,0:11:3.01:0,3,209	./.	./.	0/0:27,0:13:9.03:0,9,588	0/0:13,0:10:8.42:0,8,714	0/0:14,0:12:12.04:0,12,835	0/0:9,0:8:6.02:0,6,424	./.
chr10	1247842	.	A	AAAC	4707.50	PASS	AB=0.929;AC=11;AF=0.196;AN=56;BaseQRankSum=-9.496;DP=545;FS=2.098;HRun=0;HaplotypeScore=78.0351;InbreedingCoeff=0.8798;MQ=62.76;MQ0=1;MQRankSum=2.598;QD=37.07;ReadPosRankSum=2.261;VQSLOD=5.3486;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,13:24:28.26:694,28,0	0/0:10,0:10:24.05:0,24,320	0/0:17,0:15:17.54:0,18,211	0/0:14,0:12:14.53:0,15,192	1/1:5,17:22:51.18:1030,51,0	0/0:21,0:21:42.14:0,42,594	0/0:27,0:27:63.15:0,63,848	0/0:21,0:20:24.06:0,24,307	1/1:4,14:18:39.13:782,39,0	0/0:24,0:24:57.15:0,57,756	0/0:12,0:12:24.08:0,24,342	0/0:22,0:22:60.18:0,60,821	0/0:22,0:22:57.19:0,57,812	0/0:20,0:20:42.14:0,42,597	0/0:23,0:23:57.19:0,57,811	0/1:12,1:13:24.67:25,0,433	1/1:4,23:27:63.22:1268,63,0	0/0:22,0:22:57.11:0,57,761	0/0:13,0:12:30.10:0,30,428	0/0:12,0:12:33.11:0,33,465	1/1:6,17:23:43.70:909,44,0	0/0:13,0:13:36.12:0,36,513	0/0:21,0:21:60.17:0,60,826	0/0:16,0:16:36.12:0,36,513	0/0:24,0:24:72.24:0,72,1019	0/0:29,0:29:63.21:0,63,898	0/0:27,0:26:66.22:0,66,940	0/0:8,0:8:24.08:0,24,342
chr10	1266986	.	ATG	A	115.52	PASS	AB=0.991;AC=10;AF=0.333;AN=30;BaseQRankSum=0.765;DP=472;FS=0.000;HRun=0;HaplotypeScore=40.9333;InbreedingCoeff=0.0100;MQ=28.02;MQ0=119;MQRankSum=-1.999;QD=0.85;ReadPosRankSum=-1.209;VQSLOD=0.9415;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	0/0:12,0:11:3:0,3,25	./.	./.	0/1:25,1:12:21.95:22,0,31	1/1:19,0:9:5.74:30,6,0	0/1:25,0:14:23.72:24,0,61	0/0:20,1:8:0:0,0,0	0/0:15,2:10:3.01:0,3,40	./.	./.	./.	0/0:16,1:4:2.80:0,3,45	0/0:9,0:3:0.47:0,0,1	1/1:11,3:5:3.01:33,3,0	0/1:14,0:3:11.69:12,0,79	0/0:21,0:12:6.02:0,6,90	./.	1/1:14,4:12:3.01:33,3,0	./.	./.	0/0:14,0:9:2.98:0,3,45	0/1:20,0:8:62.27:62,0,95	0/0:21,0:9:0.47:0,0,1	./.
chr10	1267021	.	TGTGTGTGC	T	89.36	PASS	AB=1.000;AC=6;AF=0.125;AN=48;BaseQRankSum=1.387;DP=498;FS=7.117;HRun=0;HaplotypeScore=47.6607;InbreedingCoeff=0.2617;MQ=33.40;MQ0=142;MQRankSum=0.404;QD=1.15;ReadPosRankSum=0.317;VQSLOD=0.3887;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:9:3:25,3,0	0/0:4,0:2:2.98:0,3,21	0/0:29,0:2:5.90:0,6,37	0/1:31,0:2:0.01:2,0,0	0/0:19,0:14:11.35:0,11,153	0/0:15,0:8:2.96:0,3,19	0/0:18,0:5:2.98:0,3,21	0/0:16,0:3:4.83:0,5,67	1/1:4,18:11:6.02:146,6,0	0/0:15,0:12:29.85:0,30,405	0/0:20,0:8:5.92:0,6,41	0/0:17,0:11:5.86:0,6,134	0/0:15,0:8:2.92:0,3,17	./.	0/0:17,0:11:2.71:0,3,21	0/0:15,0:7:2.99:0,3,129	0/1:10,0:4:14.91:19,0,15	0/0:15,0:7:3.01:0,3,37	0/0:15,0:7:17.78:0,18,301	0/0:19,0:11:20.90:0,21,367	./.	0/0:19,0:17:11.92:0,12,94	0/0:20,0:11:5.93:0,6,40	./.	0/0:17,0:15:14.91:0,15,180	0/0:19,0:10:29.87:0,30,632	0/0:22,0:13:8.58:0,9,45	./.
chr10	1330707	.	TGGGGGA	T	93.41	PASS	AB=0.733;AC=3;AF=0.056;AN=54;BaseQRankSum=2.395;DP=197;FS=8.942;HRun=0;HaplotypeScore=42.9382;InbreedingCoeff=0.2644;MQ=61.40;MQ0=0;MQRankSum=-2.718;QD=4.92;ReadPosRankSum=1.040;VQSLOD=0.0941;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:21.96:0,22,600	0/0:3,0:3:6.02:0,6,137	0/0:6,0:5:5.68:0,6,200	0/0:4,0:3:6.02:0,6,149	0/0:9,0:9:21.07:0,21,702	./.	0/0:2,0:2:2.97:0,3,20	0/0:9,0:9:9.03:0,9,283	1/1:2,6:5:6.02:129,6,0	0/0:5,0:5:12.04:0,12,393	0/0:10,0:10:24.06:0,24,665	0/0:8,0:8:18.06:0,18,596	0/0:8,0:8:12.51:0,13,387	0/0:12,0:12:29.88:0,30,790	0/0:8,0:8:9.03:0,9,244	0/0:3,0:3:9.03:0,9,252	0/1:7,4:8:44.84:58,0,45	0/0:2,0:2:6:0,6,124	0/0:9,0:9:15.05:0,15,493	0/0:8,0:8:24.08:0,24,798	0/0:10,0:10:27.08:0,27,774	0/0:5,0:5:8.77:0,9,300	0/0:9,0:9:18.06:0,18,600	0/0:4,0:4:9.02:0,9,213	0/0:6,0:6:9.03:0,9,302	0/0:6,0:6:15.05:0,15,503	0/0:8,0:8:21.07:0,21,638	0/0:9,0:9:21.07:0,21,659
chr10	1330824	.	AG	A	142.59	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.996;DP=294;FS=1.618;HRun=2;HaplotypeScore=32.2708;InbreedingCoeff=0.8484;MQ=70.91;MQ0=0;MQRankSum=-0.205;QD=20.37;ReadPosRankSum=-0.512;VQSLOD=3.3310;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:18.84:0,19,171	0/0:8,0:8:24.08:0,24,350	0/0:6,0:4:12.03:0,12,150	0/0:8,0:7:11.20:0,11,182	0/0:22,0:22:66.21:0,66,943	0/0:6,0:6:18.05:0,18,244	0/0:8,0:8:24.03:0,24,291	0/0:12,0:12:36.11:0,36,494	1/1:1,6:7:18.06:233,18,0	0/0:16,0:16:45.11:0,45,588	0/0:16,0:16:48.15:0,48,676	0/0:5,0:5:15.05:0,15,219	0/0:11,0:11:33.11:0,33,476	0/0:9,0:9:27.08:0,27,376	0/0:7,0:7:21.04:0,21,269	0/0:7,0:7:21.07:0,21,306	0/0:6,0:6:16.77:0,17,85	0/0:13,0:13:39.11:0,39,548	0/0:11,0:11:33.10:0,33,464	0/0:14,0:14:42.09:0,42,588	0/0:8,0:8:24.07:0,24,330	0/0:5,0:5:15.04:0,15,200	0/0:5,0:5:15.05:0,15,219	0/0:6,0:6:18.02:0,18,205	0/0:15,0:15:45.14:0,45,638	0/0:23,0:23:69.23:0,69,1008	0/0:15,0:15:45.07:0,45,610	0/0:9,0:9:24.05:0,24,328
chr10	1332193	.	G	GGT	241.42	PASS	AB=0.864;AC=9;AF=0.196;AN=46;BaseQRankSum=1.341;DP=396;FS=1.758;HRun=0;HaplotypeScore=66.3447;InbreedingCoeff=0.3673;MQ=62.43;MQ0=18;MQRankSum=-0.186;QD=3.40;ReadPosRankSum=-0.617;VQSLOD=1.6302;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:2.98:0,3,22	0/0:7,0:7:5.68:0,6,57	./.	./.	0/0:9,0:9:12.03:0,12,126	0/0:14,0:14:6.48:0,6,61	./.	./.	0/0:10,0:10:9.46:0,9,86	0/0:11,0:9:5.84:0,6,62	0/0:8,0:9:5.21:0,5,22	./.	0/0:9,0:9:2.69:0,3,31	0/0:7,0:9:5.68:0,6,28	0/0:15,0:16:5.74:0,6,45	1/1:6,0:8:3:26,3,0	1/1:10,2:14:3.01:41,3,0	0/0:14,0:14:0.79:0,1,46	0/0:9,0:8:3:0,3,26	0/0:11,0:11:14.87:0,15,141	0/0:26,0:22:8.64:0,9,62	0/0:9,0:9:2.84:0,3,14	0/0:7,0:6:0.47:0,0,1	0/0:13,0:13:9.02:0,9,95	0/0:18,0:17:14.38:0,14,95	1/1:17,0:17:12.51:159,13,0	0/1:16,3:18:22.78:79,0,23	1/1:11,1:12:5.93:61,6,0
chr10	1333779	.	GT	G	3672.21	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=12.575;DP=571;FS=2.099;HRun=9;HaplotypeScore=56.9433;InbreedingCoeff=0.9842;MQ=64.85;MQ0=1;MQRankSum=2.390;QD=22.95;ReadPosRankSum=0.617;VQSLOD=4.5096;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,29:34:83.08:747,83,0	0/0:17,1:18:26.68:0,27,553	0/0:16,0:15:27.02:0,27,279	0/0:17,0:12:26.68:0,27,288	0/0:26,0:25:72.20:0,72,814	0/0:24,0:24:66.15:0,66,739	0/0:13,1:14:8.64:0,9,353	1/1:5,29:32:81.04:741,81,0	1/1:3,18:21:54.03:494,54,0	0/0:33,0:33:78.23:0,78,897	0/0:19,0:19:54.14:0,54,613	0/0:13,0:13:33.10:0,33,381	0/0:13,0:13:33.09:0,33,373	0/0:15,0:15:42.12:0,42,476	0/0:13,0:13:36.09:0,36,405	0/0:14,1:15:14.66:0,15,423	1/1:3,12:15:33.02:302,33,0	0/0:8,0:8:24.07:0,24,277	0/0:19,0:21:50.80:0,51,538	0/0:40,0:40:99:0,119,1344	0/0:16,0:16:45.12:0,45,510	0/0:28,0:29:84.08:0,84,949	0/0:27,0:27:75.21:0,75,853	0/0:13,0:13:33.10:0,33,381	0/0:21,0:21:57.15:0,57,647	1/1:1,21:22:62.99:564,63,0	1/1:2,22:24:59.92:549,60,0	1/1:0,10:10:30.02:275,30,0
chr10	1335611	.	T	TG	124.47	PASS	AC=6;AF=0.120;AN=50;BaseQRankSum=3.294;DP=473;FS=1.611;HRun=2;HaplotypeScore=43.0062;InbreedingCoeff=0.7739;MQ=61.95;MQ0=29;MQRankSum=-2.598;QD=4.98;ReadPosRankSum=-3.505;VQSLOD=-0.6161;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,4:1:3.01:47,3,0	0/0:8,0:8:24.08:0,24,336	0/0:18,0:16:48.16:0,48,670	0/0:14,0:12:27.24:0,27,385	0/0:33,0:32:93.31:0,93,1300	0/0:20,0:20:60.15:0,60,785	0/0:15,0:15:42.14:0,42,587	./.	./.	0/0:30,0:30:84.27:0,84,1160	0/0:16,0:16:45.15:0,45,629	0/0:17,0:16:48.16:0,48,671	0/0:24,0:24:72.24:0,72,1006	0/0:21,0:21:60.20:0,60,839	0/0:21,0:21:63.19:0,63,862	0/0:19,0:19:54.18:0,54,755	./.	0/0:13,0:13:39.09:0,39,521	0/0:24,0:24:69.23:0,69,965	0/0:27,0:27:81.27:0,81,1127	0/0:32,0:31:93.29:0,93,1281	0/0:17,0:17:48.16:0,48,670	0/0:21,0:21:63.21:0,63,881	0/0:11,0:11:33.11:0,33,460	0/0:17,0:17:45.15:0,45,629	0/0:1,16:1:3.01:0,3,42	1/1:2,11:6:9.03:143,9,0	1/1:2,6:1:3.01:47,3,0
chr10	1335787	.	A	AATATGTT	6249.44	PASS	AB=0.944;AC=15;AF=0.268;AN=56;BaseQRankSum=8.604;DP=535;FS=34.113;HRun=0;HaplotypeScore=119.2433;InbreedingCoeff=0.8722;MQ=61.26;MQ0=2;MQRankSum=-11.352;QD=72.67;ReadPosRankSum=1.575;VQSLOD=2.8630;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,11:11:27.09:1040,27,0	0/0:8,0:8:24.08:0,24,671	0/0:22,0:21:63.21:0,63,1577	0/0:15,0:14:41.73:0,42,1007	0/0:30,0:30:87.27:0,87,2252	0/0:28,0:28:84.29:0,84,2302	0/0:17,0:17:48.15:0,48,1247	1/1:0,7:7:21.06:754,21,0	1/1:1,11:14:30.10:1216,30,0	0/0:27,0:27:78.26:0,78,2113	0/0:28,0:28:84.25:0,84,2158	0/0:13,0:13:39.13:0,39,1090	0/0:16,0:16:48.15:0,48,1234	0/0:19,0:19:57.16:0,57,1439	0/0:23,0:23:66.21:0,66,1716	0/1:16,1:17:70.82:71,0,1230	1/1:0,7:5:15.05:609,15,0	0/0:12,0:12:36.12:0,36,1006	0/0:19,0:19:52.45:0,52,1452	0/0:36,0:36:99:0,108,2885	0/0:41,0:41:99:0,123,3153	0/0:26,0:26:69.24:0,69,1929	0/0:40,0:40:99:0,114,3151	0/0:16,0:16:48.15:0,48,1239	0/0:13,0:13:39.13:0,39,1056	1/1:0,11:9:27.09:1090,27,0	1/1:1,11:12:33.58:1347,34,0	1/1:0,2:1:3.01:122,3,0
chr10	1339416	.	G	GTC	679.04	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=7.225;DP=674;FS=1.655;HRun=0;HaplotypeScore=113.5410;InbreedingCoeff=0.8869;MQ=67.55;MQ0=22;MQRankSum=-5.281;QD=13.31;ReadPosRankSum=-1.126;VQSLOD=3.5498;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,11:19:13.80:221,14,0	0/0:10,0:10:30.10:0,30,424	0/0:71,0:42:82.66:0,83,1328	0/0:93,0:45:56.77:0,57,976	0/0:27,0:27:81.25:0,81,1124	0/0:21,0:21:59.56:0,60,812	0/0:22,0:22:33.41:0,33,684	0/0:39,0:39:99:0,99,1261	1/1:7,8:14:12.51:192,13,0	0/0:20,0:20:55.93:0,56,751	0/0:24,0:24:63.15:0,63,857	0/0:12,0:12:36.12:0,36,514	0/0:21,0:21:54.18:0,54,751	0/0:17,0:17:47.98:0,48,665	0/0:13,0:13:39.07:0,39,521	0/0:12,0:12:36.11:0,36,498	1/1:2,8:10:24.08:401,24,0	0/0:19,0:19:57.12:0,57,778	0/0:17,0:17:51.16:0,51,714	0/0:30,0:29:78.19:0,78,1063	0/0:25,0:25:66.19:0,66,893	0/0:19,0:19:57.17:0,57,781	0/0:21,0:21:60.19:0,60,827	0/0:25,0:25:72.24:0,72,1017	0/0:19,0:19:51.17:0,51,730	0/0:18,0:18:48.16:0,48,659	0/0:18,0:18:19.77:0,20,473	0/1:7,0:7:0.63:1,0,132
chr10	1339469	.	TCTC	T	196.27	PASS	AB=1.000;AC=6;AF=0.107;AN=56;BaseQRankSum=8.578;DP=690;FS=1.648;HRun=0;HaplotypeScore=126.2873;InbreedingCoeff=0.2482;MQ=57.65;MQ0=37;MQRankSum=-6.035;QD=2.16;ReadPosRankSum=-5.734;VQSLOD=0.2707;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:14,4:17:18.38:193,18,0	0/0:10,0:10:29.77:0,30,574	0/0:61,0:18:49.41:0,49,791	0/0:87,0:24:42.78:0,43,763	0/0:25,0:25:68.57:0,69,1478	0/0:23,0:23:62.99:0,63,1273	0/0:22,0:22:62.24:0,62,1368	0/0:30,0:30:47.27:0,47,844	0/1:17,0:16:60.61:61,0,132	0/0:28,0:28:83.95:0,84,1808	0/0:23,0:23:63.21:0,63,1408	0/0:8,0:8:24.08:0,24,540	0/0:13,0:13:36.12:0,36,792	0/0:23,0:23:66.23:0,66,1512	0/0:16,0:16:41.85:0,42,989	0/0:17,0:17:50.83:0,51,977	0/1:13,0:13:16.99:17,0,48	0/0:18,0:18:26.24:0,26,1075	0/0:24,0:22:65.89:0,66,1333	0/0:35,0:35:93.32:0,93,2123	0/0:23,0:23:54.71:0,55,1251	0/0:27,0:27:77.93:0,78,1632	0/0:28,0:28:80.93:0,81,1785	0/0:25,0:24:65.88:0,66,1406	0/0:24,0:22:62.94:0,63,1321	0/1:23,0:22:33.58:34,0,506	0/1:20,0:20:21.32:21,0,125	0/0:7,0:6:15:0,15,205
chr10	1339472	.	C	CCT	1292.18	PASS	AB=0.929;AC=8;AF=0.143;AN=56;BaseQRankSum=9.587;DP=689;FS=9.096;HRun=0;HaplotypeScore=117.3973;InbreedingCoeff=0.1134;MQ=61.60;MQ0=29;MQRankSum=-8.191;QD=9.94;ReadPosRankSum=-2.477;VQSLOD=2.2688;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:18:12.46:94,12,0	0/0:9,0:9:27.06:0,27,408	0/0:59,0:23:47.84:0,48,703	0/0:86,0:27:62.17:0,62,712	0/0:26,0:26:69.17:0,69,1061	0/0:24,0:24:66.19:0,66,992	0/0:23,0:23:66.17:0,66,992	0/1:29,0:29:99:518,0,411	0/1:17,0:16:77.90:126,0,78	0/0:28,0:28:84.25:0,84,1316	0/0:23,0:23:63.21:0,63,1007	0/0:10,0:10:30.06:0,30,433	0/0:13,0:13:36.12:0,36,578	0/0:23,0:23:66.06:0,66,1062	0/0:16,0:16:42.12:0,42,682	0/0:17,0:17:48.12:0,48,719	0/1:13,0:13:22.29:179,0,22	0/0:18,0:18:45.33:0,45,752	0/0:23,0:21:63.18:0,63,962	0/0:36,0:36:90.31:0,90,1438	0/0:24,0:24:56.17:0,56,882	0/0:27,0:27:78.23:0,78,1212	0/0:28,0:28:80.01:0,80,1245	0/0:24,0:23:63.14:0,63,952	0/0:22,0:21:60.17:0,60,921	0/1:22,2:23:99:352,0,248	0/1:18,3:21:63.31:107,0,63	0/1:5,1:6:56.42:56,0,57
chr10	1339474	.	C	CCTTT	2832.79	PASS	AB=0.736;AC=8;AF=0.143;AN=56;BaseQRankSum=10.444;DP=699;FS=5.229;HRun=0;HaplotypeScore=138.3106;InbreedingCoeff=0.1225;MQ=66.54;MQ0=26;MQRankSum=-9.357;QD=19.67;ReadPosRankSum=-4.824;VQSLOD=2.3914;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:18:21.35:228,21,0	0/0:9,0:9:27.09:0,27,537	0/0:55,0:23:45.20:0,45,976	0/0:87,0:32:19.69:0,20,857	0/0:24,0:24:69.22:0,69,1335	0/0:24,0:24:66.22:0,66,1273	0/0:23,0:23:63.22:0,63,1276	0/1:15,14:30:99:958,0,495	0/1:8,12:20:83.49:277,0,83	0/0:29,0:29:84.28:0,84,1700	0/0:22,0:22:63.20:0,63,1278	0/0:10,0:10:30.10:0,30,577	0/0:13,0:13:39.12:0,39,774	0/0:24,0:24:66.23:0,66,1379	0/0:16,0:16:42.09:0,42,863	0/0:18,0:18:54.13:0,54,955	0/1:6,9:16:35.88:338,0,36	0/0:18,0:18:30.97:0,31,969	0/0:22,0:21:63.21:0,63,1242	0/0:36,0:36:93.31:0,93,1856	0/0:24,0:24:57.38:0,57,1146	0/0:27,0:27:78.27:0,78,1597	0/0:29,0:29:72.33:0,72,1619	0/0:23,0:22:59.94:0,60,1223	0/0:21,0:20:60.19:0,60,1157	0/1:27,0:26:99:764,0,368	0/1:12,12:25:83.13:305,0,83	0/1:5,0:5:63.60:105,0,64
chr10	1340063	.	TG	T	491.75	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.747;DP=512;FS=7.605;HRun=1;HaplotypeScore=48.4353;InbreedingCoeff=0.9866;MQ=87.96;MQ0=0;MQRankSum=-4.074;QD=28.93;ReadPosRankSum=-0.062;VQSLOD=2.6227;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:60.20:0,60,957	0/0:7,0:7:21.07:0,21,336	0/0:21,0:21:61.18:0,61,807	0/0:19,0:19:50.54:0,51,662	0/0:29,0:29:87.30:0,87,1385	0/0:15,0:15:45.15:0,45,719	0/0:14,0:14:42.14:0,42,671	0/0:28,0:28:84.27:0,84,1301	0/0:15,0:15:45.14:0,45,696	0/0:29,0:29:87.29:0,87,1370	0/0:19,0:19:54.18:0,54,863	0/0:15,0:15:45.14:0,45,696	0/0:16,0:16:48.16:0,48,767	0/0:7,0:7:21.07:0,21,336	0/0:9,0:9:27.09:0,27,432	0/0:7,0:7:21.07:0,21,335	1/1:0,17:17:42.14:587,42,0	0/0:20,0:20:60.20:0,60,958	0/0:19,0:19:57.19:0,57,890	0/0:28,0:28:81.28:0,81,1292	0/0:13,0:13:39.12:0,39,596	0/0:25,0:25:75.24:0,75,1169	0/0:29,0:29:87.28:0,87,1367	0/0:14,0:14:42.13:0,42,647	0/0:17,0:17:51.15:0,51,790	0/0:21,0:21:63.21:0,63,1008	0/0:28,0:28:84.29:0,84,1342	0/0:11,0:11:33.11:0,33,527
chr10	1341576	.	C	CT	7588.13	PASS	AB=0.531;AC=13;AF=0.232;AN=56;BaseQRankSum=-14.801;DP=683;FS=0.327;HRun=0;HaplotypeScore=68.8091;InbreedingCoeff=0.9114;MQ=74.79;MQ0=0;MQRankSum=-2.138;QD=42.39;ReadPosRankSum=2.851;VQSLOD=5.4965;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,43:44:99:1667,105,0	0/0:16,0:16:45.15:0,45,629	0/0:33,0:33:78.68:0,79,1258	0/0:27,0:26:66.14:0,66,859	0/0:29,0:28:69.23:0,69,960	0/0:27,1:28:78.26:0,78,1090	0/0:21,0:21:63.21:0,63,881	1/1:0,26:26:78.27:1232,78,0	1/1:0,29:29:75.26:1198,75,0	0/0:30,0:30:90.28:0,90,1214	0/0:28,0:28:75.25:0,75,1048	0/0:15,0:15:45.13:0,45,611	0/0:22,0:22:63.21:0,63,880	0/0:18,0:18:54.18:0,54,755	0/0:28,0:28:84.28:0,84,1175	0/0:14,0:14:42.13:0,42,570	1/1:0,17:17:48.16:767,48,0	0/0:12,0:12:33.11:0,33,444	0/0:17,0:17:45.15:0,45,629	0/0:32,0:32:90.30:0,90,1258	0/0:34,0:34:99:0,102,1425	0/0:32,0:31:78.23:0,78,1075	0/0:25,0:25:66.21:0,66,900	0/0:22,0:22:66.20:0,66,904	0/0:20,0:20:48.14:0,48,670	0/1:3,23:26:8.69:1020,0,9	1/1:0,30:30:87.30:1368,87,0	1/1:0,7:7:21.07:336,21,0
chr10	1343144	.	T	TA	2338.14	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=3.053;DP=297;FS=11.619;HRun=6;HaplotypeScore=39.1703;InbreedingCoeff=0.9142;MQ=60.47;MQ0=1;MQRankSum=-5.762;QD=29.60;ReadPosRankSum=-1.507;VQSLOD=2.5660;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,11:11:33.11:415,33,0	0/0:6,0:6:18.02:0,18,176	0/0:9,0:5:9.02:0,9,92	0/0:11,0:7:10.79:0,11,95	0/0:20,0:20:60.14:0,60,611	0/0:13,0:13:33.07:0,33,336	0/0:3,0:3:9.02:0,9,92	1/1:5,15:17:45.14:566,45,0	1/1:2,3:5:9.03:113,9,0	0/0:16,0:16:48.11:0,48,490	0/0:17,0:17:42.09:0,42,428	0/0:6,0:6:15.03:0,15,153	0/0:5,0:5:11.70:0,12,103	0/0:11,0:11:27.06:0,27,275	0/0:11,0:11:27.03:0,27,265	0/0:8,0:8:24.05:0,24,244	1/1:2,4:6:12.04:151,12,0	0/0:7,0:7:21.05:0,21,214	0/0:16,0:16:42.09:0,42,425	0/0:21,0:21:54.12:0,54,551	0/0:5,0:5:12.03:0,12,122	0/0:4,0:4:6:0,6,54	0/0:11,0:11:27.06:0,27,275	0/0:5,0:5:12.03:0,12,121	0/0:12,0:11:36.08:0,36,367	1/1:4,10:14:36.10:439,36,0	1/1:6,10:16:48.15:582,48,0	1/1:0,7:7:21.07:264,21,0
chr10	1343173	.	C	CAAA	2539.92	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=3.124;DP=330;FS=2.134;HRun=9;HaplotypeScore=63.6371;InbreedingCoeff=0.9202;MQ=65.48;MQ0=1;MQRankSum=-8.140;QD=30.24;ReadPosRankSum=-1.385;VQSLOD=2.0864;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:5,0:10:8.45:24,8,0	0/0:8,0:8:21.06:0,21,262	0/0:9,0:8:15.04:0,15,185	0/0:13,0:9:20.86:0,21,219	0/0:22,0:23:60.01:0,60,704	0/0:11,0:11:27:0,27,321	0/0:3,0:3:6.01:0,6,76	1/1:11,18:28:70:1148,70,0	1/1:2,0:8:23.90:197,24,0	0/0:19,0:19:45.11:0,45,568	0/0:14,0:14:33.09:0,33,414	0/0:8,0:8:24.08:0,24,303	0/0:5,0:5:15.05:0,15,186	0/0:11,0:11:23.98:0,24,270	0/0:8,0:8:21.04:0,21,265	0/0:10,0:10:27.08:0,27,341	1/1:2,0:6:11.95:92,12,0	0/0:6,0:6:18.01:0,18,196	0/0:20,0:20:45.06:0,45,545	0/0:25,0:24:66.18:0,66,833	0/0:6,0:6:18.05:0,18,215	0/0:7,0:8:19.64:0,20,263	0/0:18,0:18:54.16:0,54,666	0/0:4,0:4:9.03:0,9,114	0/0:16,0:15:39.09:0,39,477	1/1:5,8:13:33.09:581,33,0	1/1:3,7:13:39.05:602,39,0	1/1:3,1:4:6.01:85,6,0
chr10	1343206	.	GAA	G	425.44	PASS	AB=0.825;AC=8;AF=0.143;AN=56;BaseQRankSum=4.792;DP=358;FS=1.781;HRun=15;HaplotypeScore=61.6139;InbreedingCoeff=0.6143;MQ=66.20;MQ0=6;MQRankSum=-3.326;QD=9.67;ReadPosRankSum=0.405;VQSLOD=1.7602;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,8:10:17.97:158,18,0	0/0:7,0:9:26.06:0,26,303	0/0:23,0:10:10.71:0,11,86	0/0:11,0:8:3.95:0,4,63	0/0:21,0:23:34.18:0,34,625	0/0:10,0:12:25.93:0,26,281	0/0:3,0:5:11.52:0,12,118	0/0:19,0:18:30.03:0,30,283	1/1:1,9:10:26.93:236,27,0	0/0:18,0:19:20.30:0,20,386	0/0:15,1:17:21.57:0,22,498	0/0:8,0:10:26.56:0,27,307	0/0:3,0:3:9.03:0,9,117	0/0:7,0:7:17.42:0,17,212	0/0:13,0:15:35.49:0,35,419	0/1:8,1:9:6.02:6,0,160	1/1:2,7:9:14.98:132,15,0	0/1:4,2:6:40.88:41,0,49	0/0:11,0:11:26.17:0,26,315	0/0:24,0:26:57.53:0,58,637	0/0:12,0:12:27.07:0,27,338	0/0:11,0:12:6.82:0,7,333	0/0:26,0:27:62.87:0,63,718	0/0:4,0:4:12.04:0,12,159	0/0:11,0:12:31.30:0,31,316	0/0:15,0:16:25.34:0,25,249	0/0:12,0:13:20.95:0,21,180	0/0:4,0:5:6.99:0,7,59
chr10	1343221	.	A	AC	900.16	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-5.564;DP=377;FS=2.323;HRun=1;HaplotypeScore=57.7610;InbreedingCoeff=0.9609;MQ=74.86;MQ0=3;MQRankSum=2.364;QD=18.37;ReadPosRankSum=-0.669;VQSLOD=3.6588;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:23.34:0,23,137	0/0:12,0:12:35.94:0,36,373	0/0:28,0:17:36.96:0,37,309	0/0:16,0:12:25.15:0,25,168	0/0:23,0:23:56.46:0,56,557	0/0:15,0:15:39.64:0,40,342	0/0:6,0:6:15.86:0,16,147	1/1:2,16:18:44.98:430,45,0	0/0:15,0:15:44.17:0,44,303	0/0:12,0:12:26.60:0,27,274	0/0:18,0:18:48.22:0,48,359	0/0:9,0:10:24.29:0,24,199	0/0:8,0:8:23.87:0,24,186	0/0:10,0:10:26.91:0,27,247	0/0:15,0:15:39.78:0,40,356	0/0:7,0:7:14.89:0,15,146	0/0:10,0:10:17.60:0,18,111	0/0:6,0:6:17.88:0,18,158	0/0:15,0:15:38.98:0,39,403	0/0:24,0:24:60.56:0,61,575	0/0:11,0:11:32.92:0,33,346	0/0:12,0:12:34.01:0,34,303	0/0:22,0:22:52.13:0,52,494	0/0:6,0:6:14.95:0,15,150	0/0:13,0:13:28.39:0,28,279	1/1:3,13:16:41.97:405,42,0	1/1:3,5:9:11.73:101,12,0	1/1:2,4:6:11.77:118,12,0
chr10	1344731	.	CA	C	639.46	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.150;DP=496;FS=5.135;HRun=7;HaplotypeScore=49.9981;InbreedingCoeff=0.8972;MQ=75.23;MQ0=0;MQRankSum=-2.795;QD=25.58;ReadPosRankSum=-0.135;VQSLOD=3.9392;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,24:25:72.16:734,72,0	0/0:13,0:13:33.09:0,33,402	0/0:13,0:13:5.96:0,6,225	0/0:14,0:13:28.89:0,29,332	0/0:23,0:22:63.19:0,63,780	0/0:25,0:25:72.23:0,72,905	0/0:7,0:7:21.05:0,21,249	0/0:27,0:27:75.23:0,75,932	0/0:14,0:14:39.12:0,39,490	0/0:28,0:28:75.24:0,75,935	0/0:23,0:23:60.18:0,60,743	0/0:10,0:10:30.10:0,30,377	0/0:11,0:11:27.08:0,27,327	0/0:15,0:15:45.14:0,45,566	0/0:14,0:14:42.13:0,42,528	0/0:10,0:10:30.10:0,30,377	0/0:24,0:24:66.20:0,66,817	0/0:13,0:13:36.09:0,36,437	0/0:20,0:20:51.14:0,51,613	0/0:23,0:23:66.21:0,66,830	0/0:15,0:15:45.14:0,45,566	0/0:17,0:17:45.14:0,45,565	0/0:25,0:25:66.20:0,66,817	0/0:10,0:10:30.10:0,30,377	0/0:19,0:19:54.16:0,54,659	0/0:25,0:25:72.23:0,72,906	0/0:24,0:24:63.17:0,63,761	0/0:9,0:9:27.09:0,27,340
chr10	1346333	.	T	TA	8144.59	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-13.632;DP=610;FS=1.907;HRun=0;HaplotypeScore=56.2040;InbreedingCoeff=0.9979;MQ=76.04;MQ0=0;MQRankSum=-3.769;QD=45.50;ReadPosRankSum=0.104;VQSLOD=4.7994;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,44:44:99:2062,129,0	0/0:9,0:9:27.09:0,27,378	0/0:22,0:22:57.13:0,57,758	0/0:27,0:27:72.23:0,72,977	0/0:28,0:28:84.28:0,84,1173	0/0:18,0:18:48.11:0,48,671	0/0:25,0:25:69.18:0,69,910	1/1:0,31:31:90.26:1393,90,0	1/1:0,31:31:87.30:1390,87,0	0/0:31,0:31:90.27:0,90,1227	0/0:23,0:23:69.23:0,69,965	0/0:17,0:17:51.15:0,51,695	0/0:14,0:14:42.14:0,42,586	0/0:17,0:17:51.17:0,51,713	0/0:15,0:15:45.14:0,45,612	0/0:14,0:14:42.14:0,42,587	1/1:0,16:16:45.15:719,45,0	0/0:12,0:12:33.06:0,33,423	0/0:16,0:16:45.15:0,45,623	0/0:38,0:38:99:0,111,1552	0/0:34,0:34:99:0,102,1426	0/0:18,0:18:54.18:0,54,755	0/0:22,0:22:66.22:0,66,923	0/0:23,0:23:66.20:0,66,903	0/0:8,0:8:24.08:0,24,336	1/1:1,26:27:81.28:1285,81,0	1/1:0,24:24:63.21:1007,63,0	1/1:0,6:6:18.06:288,18,0
chr10	1348830	.	AAACAACAACAACAAC	A	6736.48	PASS	AB=0.639;AC=13;AF=0.232;AN=56;BaseQRankSum=11.919;DP=526;FS=12.352;HRun=0;HaplotypeScore=203.6986;InbreedingCoeff=0.8512;MQ=65.34;MQ0=2;MQRankSum=-9.121;QD=50.27;ReadPosRankSum=1.589;VQSLOD=3.6456;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:10,13:23:15.41:912,0,15	0/0:10,0:10:27.08:0,27,1765	0/0:33,0:21:36.12:0,36,1759	0/0:33,0:25:48.16:0,48,2166	0/0:28,0:28:78.27:0,78,5359	0/0:24,0:25:66.23:0,66,4103	0/0:11,0:11:33.08:0,33,1494	1/1:13,13:26:39.01:549,39,0	1/1:2,14:16:30.10:1287,30,0	0/0:20,0:20:48.16:0,48,3246	0/0:23,0:23:57.18:0,57,3742	0/0:11,0:11:27.08:0,27,1614	0/0:11,0:11:30.10:0,30,2033	0/0:14,0:14:39.12:0,39,2534	0/0:14,0:14:39.12:0,39,2256	0/0:13,0:13:36.12:0,36,2320	1/1:6,11:17:9.03:379,9,0	0/0:21,0:21:50.39:0,50,3275	0/0:17,0:16:36.12:0,36,2363	0/0:30,0:30:78.25:0,78,4979	0/0:12,0:12:36.12:0,36,2477	0/0:16,0:16:39.13:0,39,2592	0/0:24,0:24:60.16:0,60,3381	0/0:19,0:20:59.01:0,59,3888	0/0:6,0:6:15.05:0,15,1093	1/1:4,16:20:48.03:1431,48,0	1/1:10,20:30:39.52:2049,40,0	1/1:0,2:2:3.01:129,3,0
chr10	1349024	.	CA	C	3946.13	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=12.271;DP=585;FS=6.809;HRun=10;HaplotypeScore=57.1361;InbreedingCoeff=0.9606;MQ=59.57;MQ0=7;MQRankSum=-2.490;QD=21.92;ReadPosRankSum=0.514;VQSLOD=4.5745;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,36:37:99:885,102,0	0/0:13,0:13:33.09:0,33,365	0/0:19,1:10:18.38:0,18,186	0/0:21,1:17:12.67:0,13,301	0/0:28,0:28:75.18:0,75,814	0/0:18,0:19:50.97:0,51,545	0/0:15,1:16:19.07:0,19,438	1/1:5,20:25:59.98:520,60,0	1/1:2,15:17:38.99:338,39,0	0/0:22,0:21:63.16:0,63,683	0/0:36,0:36:99:0,99,1080	0/0:11,1:12:7.04:0,7,306	0/0:12,0:12:33.02:0,33,349	0/0:12,0:12:33.07:0,33,351	0/0:11,0:11:33.07:0,33,355	0/0:11,0:11:24.06:0,24,266	1/1:5,25:30:41.81:592,42,0	0/0:14,0:14:36.08:0,36,387	0/0:24,2:24:13.87:0,14,574	0/0:31,0:31:78.21:0,78,863	0/0:18,0:18:41.99:0,42,438	0/0:28,0:28:72.18:0,72,782	0/0:20,2:22:8.34:0,8,543	0/0:19,0:19:51.14:0,51,564	0/0:13,0:13:30.07:0,30,325	1/1:5,28:33:83.96:725,84,0	1/1:1,29:30:77.98:677,78,0	1/1:0,8:8:24:208,24,0
chr10	1350456	.	C	CTATACA	3602.77	PASS	AB=0.803;AC=12;AF=0.231;AN=52;BaseQRankSum=-2.010;DP=585;FS=41.600;HRun=0;HaplotypeScore=83.4777;InbreedingCoeff=0.4916;MQ=43.98;MQ0=55;MQRankSum=-9.110;QD=28.82;ReadPosRankSum=-1.165;VQSLOD=1.4996;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,3:7:6.02:219,6,0	0/0:11,0:10:24.08:0,24,589	./.	0/0:60,0:2:6.02:0,6,128	0/0:23,0:20:41.85:0,42,1024	0/0:10,0:10:18.06:0,18,443	0/0:19,0:19:45.11:0,45,1054	1/1:10,9:10:27.09:935,27,0	0/1:3,5:6:21.16:423,0,21	0/0:32,0:29:84.22:0,84,1971	0/0:13,0:12:26.60:0,27,557	0/1:24,0:23:34:34,0,1223	0/0:16,0:15:42.09:0,42,942	0/1:21,1:21:29.29:29,0,1343	0/0:19,0:18:45.07:0,45,991	0/0:16,0:16:45.15:0,45,1086	1/1:4,5:5:6.02:219,6,0	0/0:14,0:13:36.04:0,36,805	0/0:19,0:9:21.54:0,22,518	0/0:22,0:19:54.19:0,54,1329	0/0:50,0:49:99:0,126,3057	0/0:19,0:19:32.85:0,33,812	0/0:18,0:16:33.11:0,33,810	0/0:31,0:30:81.22:0,81,1908	0/0:12,0:12:15.05:0,15,347	0/1:7,9:11:99:847,0,118	1/1:3,13:11:27.05:896,27,0	./.
chr10	1350457	.	T	TA	124.73	PASS	AB=0.939;AC=12;AF=0.231;AN=52;BaseQRankSum=9.840;DP=572;FS=23.781;HRun=0;HaplotypeScore=55.9431;InbreedingCoeff=0.5467;MQ=44.29;MQ0=59;MQRankSum=-9.235;QD=1.22;ReadPosRankSum=-1.228;VQSLOD=0.1460;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:6,1:6:5.19:20,5,0	0/0:11,0:10:27.05:0,27,355	./.	0/0:60,0:2:5.99:0,6,51	0/0:23,0:20:42.14:0,42,586	0/0:10,0:10:18.04:0,18,251	0/0:19,0:19:45.11:0,45,607	1/1:20,0:8:18.17:70,18,0	0/1:7,0:5:7.58:26,0,8	0/0:28,1:28:39.25:0,39,1072	0/0:13,0:12:26.48:0,26,321	0/0:23,0:22:54.03:0,54,724	0/1:14,2:15:0.97:1,0,499	0/0:22,0:21:49.93:0,50,783	0/0:19,0:18:45.06:0,45,585	0/0:15,0:15:45.15:0,45,628	1/1:7,2:5:5.19:20,5,0	0/1:11,2:12:7.93:8,0,424	0/0:20,0:9:21.06:0,21,293	0/0:20,0:19:54.18:0,54,754	0/0:49,0:48:99:0,126,1761	0/0:19,0:19:32.98:0,33,461	0/0:18,0:17:33.11:0,33,461	0/0:30,2:31:43.24:0,43,1091	0/0:12,0:12:15.05:0,15,209	0/1:14,0:10:53.20:53,0,57	1/1:16,0:10:20.77:80,21,0	./.
chr10	1350727	.	AG	A	803.53	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=8.688;DP=389;FS=11.289;HRun=2;HaplotypeScore=51.7659;InbreedingCoeff=0.7341;MQ=67.73;MQ0=5;MQRankSum=-1.812;QD=10.57;ReadPosRankSum=1.818;VQSLOD=0.4031;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,21:24:37.79:550,38,0	0/0:4,0:4:12.01:0,12,138	0/1:24,0:11:8.92:9,0,147	0/0:23,0:12:5.32:0,5,164	0/0:10,0:10:24.07:0,24,334	0/0:14,0:14:39.11:0,39,544	0/0:7,0:7:0.20:0,0,234	0/0:16,0:16:45.12:0,45,599	1/1:14,0:14:23.87:180,24,0	0/0:17,0:17:50.81:0,51,641	0/0:26,0:26:66.16:0,66,875	0/0:10,0:10:27.07:0,27,353	0/0:11,0:11:30.09:0,30,424	0/0:8,0:8:24.08:0,24,352	0/0:8,0:8:24.07:0,24,338	0/0:14,0:14:42.07:0,42,507	1/1:13,1:14:26.60:210,27,0	0/0:11,0:11:33.11:0,33,477	0/0:21,0:20:48.76:0,49,637	0/0:17,0:17:41.31:0,41,575	0/0:16,0:16:48.11:0,48,657	0/0:4,0:4:11.92:0,12,102	0/0:9,0:9:26.92:0,27,338	0/0:7,0:7:21.06:0,21,289	0/0:7,0:7:15.92:0,16,189	0/0:17,0:17:51.14:0,51,669	0/0:20,0:20:54:0,54,635	0/0:16,0:16:48.13:0,48,652
chr10	1350728	.	GGA	G	697.90	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.448;DP=392;FS=8.290;HRun=0;HaplotypeScore=58.6793;InbreedingCoeff=0.8461;MQ=67.76;MQ0=4;MQRankSum=-1.111;QD=13.17;ReadPosRankSum=3.043;VQSLOD=2.2843;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:24,1:24:1.81:101,2,0	0/0:4,0:4:12.01:0,12,170	0/0:24,0:11:6.46:0,6,140	0/0:22,0:12:10.38:0,10,220	0/0:10,0:10:27.04:0,27,462	0/0:14,0:14:42.08:0,42,730	0/0:7,0:7:20.74:0,21,350	0/0:17,0:17:48.13:0,48,793	1/1:0,14:14:24.04:352,24,0	0/0:17,0:17:50.82:0,51,830	0/0:26,0:26:69.18:0,69,1178	0/0:10,0:10:30.08:0,30,480	0/0:10,0:10:30.10:0,30,577	0/0:8,0:8:24.08:0,24,473	0/0:9,0:9:27.07:0,27,474	0/0:15,0:15:45.09:0,45,679	1/1:1,13:14:26.30:375,26,0	0/0:11,0:11:33.11:0,33,620	0/0:21,0:21:61.81:0,62,937	0/0:18,0:18:48.11:0,48,824	0/0:16,0:16:48.12:0,48,877	0/0:4,0:4:11.96:0,12,136	0/0:9,0:9:26.92:0,27,438	0/0:7,0:7:21.07:0,21,388	0/0:7,0:7:20.97:0,21,274	0/0:17,0:17:51.15:0,51,879	0/0:20,0:20:57.04:0,57,849	0/0:16,0:16:48.16:0,48,874
chr10	1350901	.	A	AT	4729.71	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-10.314;DP=362;FS=23.882;HRun=7;HaplotypeScore=32.9375;InbreedingCoeff=0.8818;MQ=60.95;MQ0=0;MQRankSum=-0.780;QD=29.38;ReadPosRankSum=0.980;VQSLOD=2.9069;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,25:30:72.22:870,72,0	0/0:3,0:3:9.01:0,9,83	0/0:6,0:5:3.97:0,4,65	0/0:6,0:6:14.98:0,15,135	0/0:11,0:11:33.05:0,33,318	0/0:14,0:14:42.07:0,42,406	0/0:7,0:7:18.01:0,18,168	1/1:9,24:33:72.18:835,72,0	1/1:0,13:13:36.11:434,36,0	0/0:12,0:12:33.04:0,33,314	0/0:12,0:12:30.05:0,30,290	0/0:3,0:3:9.01:0,9,87	0/0:12,0:12:33.05:0,33,319	0/0:8,0:8:24.04:0,24,232	0/0:9,0:9:27.01:0,27,253	0/0:15,0:15:42.05:0,42,400	1/1:1,20:21:54.17:652,54,0	0/0:6,0:6:15.02:0,15,145	0/0:15,0:15:45.05:0,45,425	0/0:25,0:25:69.09:0,69,661	0/0:3,0:3:6.01:0,6,58	0/0:4,0:4:9.01:0,9,87	0/0:13,0:13:33.05:0,33,316	0/0:7,0:7:15.02:0,15,145	0/0:10,0:10:2.17:0,2,232	1/1:4,16:20:48.13:566,48,0	1/1:6,16:22:51.15:611,51,0	1/1:0,22:22:63.19:761,63,0
chr10	1351568	.	A	ATCT	4453.79	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-8.346;DP=637;FS=5.214;HRun=0;HaplotypeScore=75.6579;InbreedingCoeff=0.9662;MQ=55.11;MQ0=0;MQRankSum=-3.654;QD=27.16;ReadPosRankSum=2.463;VQSLOD=4.1695;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,19:21:18.70:446,19,0	0/0:12,0:12:27.07:0,27,387	0/0:28,0:17:51.17:0,51,766	0/0:23,0:14:19.73:0,20,487	0/0:29,0:29:66.22:0,66,1016	0/0:29,0:29:66.22:0,66,1019	0/0:13,0:13:30.10:0,30,457	1/1:6,23:18:36.03:594,36,0	1/1:0,30:26:51.18:1095,51,0	0/0:33,0:33:93.31:0,93,1418	0/0:24,0:23:57.17:0,57,855	0/0:16,0:16:42.11:0,42,604	0/0:21,0:21:54.18:0,54,835	0/0:11,0:11:30.05:0,30,398	0/0:23,0:23:63.17:0,63,944	0/0:24,0:24:57.19:0,57,879	1/1:2,22:21:21.07:450,21,0	0/0:19,0:18:45.15:0,45,696	0/0:14,0:13:36.11:0,36,536	0/0:30,0:30:78.26:0,78,1206	0/0:35,0:35:87.28:0,87,1320	0/0:19,0:19:48.16:0,48,742	0/0:21,0:21:48.16:0,48,743	0/0:18,0:17:42.14:0,42,650	0/0:31,0:31:84.29:0,84,1296	1/1:6,18:22:4.67:838,5,0	1/1:4,18:22:36.09:772,36,0	1/1:0,8:8:12.04:258,12,0
chr10	1361608	.	T	TA	3206.63	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=-6.904;DP=412;FS=22.462;HRun=9;HaplotypeScore=40.1764;InbreedingCoeff=0.8846;MQ=68.69;MQ0=1;MQRankSum=0.649;QD=22.90;ReadPosRankSum=0.397;VQSLOD=2.0324;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,24:25:57.15:629,57,0	0/0:8,0:8:24:0,24,208	0/0:10,0:8:14.95:0,15,122	0/1:8,0:6:16.16:16,0,33	0/0:21,0:22:58.99:0,59,494	0/0:15,0:15:32.98:0,33,286	0/0:4,0:4:12:0,12,104	1/1:4,18:22:45.07:469,45,0	1/1:0,8:8:21.06:232,21,0	0/0:31,0:30:71.93:0,72,620	0/0:26,0:26:59.96:0,60,515	0/0:10,0:10:26.99:0,27,234	0/0:13,0:13:32.97:0,33,283	0/0:7,0:7:11.93:0,12,93	0/0:16,0:16:38.94:0,39,329	0/0:6,0:6:18:0,18,156	1/1:3,11:14:30.08:331,30,0	0/0:7,0:7:20.99:0,21,180	0/0:15,0:15:35.94:0,36,304	0/0:23,0:23:62.96:0,63,544	0/0:11,0:11:29.97:0,30,253	0/0:4,0:4:9:0,9,78	0/0:14,0:14:35.99:0,36,312	0/0:9,0:9:26.96:0,27,228	0/0:21,0:21:47.93:0,48,409	1/1:2,22:24:66.16:712,66,0	1/1:5,20:25:54.14:587,54,0	1/1:1,12:13:39.11:430,39,0
chr10	1363386	.	GA	G	357.40	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.750;DP=571;FS=6.185;HRun=1;HaplotypeScore=57.3406;InbreedingCoeff=0.9034;MQ=76.11;MQ0=0;MQRankSum=-2.742;QD=21.02;ReadPosRankSum=1.137;VQSLOD=3.5817;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,15:17:35.95:452,36,0	0/0:9,0:9:27.09:0,27,431	0/0:24,0:22:66.18:0,66,989	0/0:21,0:20:60.19:0,60,884	0/0:37,0:37:99:0,108,1666	0/0:16,0:16:48.16:0,48,767	0/0:14,0:14:39.12:0,39,599	0/0:30,0:30:90.30:0,90,1419	0/0:22,0:22:66.23:0,66,1054	0/0:29,0:29:87.28:0,87,1367	0/0:31,0:31:93.30:0,93,1455	0/0:18,0:18:54.18:0,54,862	0/0:20,0:20:60.20:0,60,958	0/0:11,0:11:30.10:0,30,477	0/0:15,0:15:45.13:0,45,673	0/0:16,0:16:48.15:0,48,744	0/0:11,0:11:33.03:0,33,473	0/0:14,0:14:39.09:0,39,583	0/0:30,0:30:90.28:0,90,1373	0/0:29,0:29:87.30:0,87,1390	0/0:17,0:17:51.17:0,51,814	0/0:26,0:26:78.27:0,78,1243	0/0:25,0:25:75.24:0,75,1175	0/0:2,0:2:6.02:0,6,96	0/0:11,0:11:33.11:0,33,527	0/0:27,0:27:78.27:0,78,1247	0/0:27,0:27:81.26:0,81,1267	0/0:22,0:22:57.16:0,57,862
chr10	1363850	.	GA	G	1508.48	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=9.001;DP=487;FS=1.034;HRun=9;HaplotypeScore=50.9735;InbreedingCoeff=0.9522;MQ=71.09;MQ0=0;MQRankSum=0.590;QD=19.59;ReadPosRankSum=-1.139;VQSLOD=3.4593;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:19:32.13:0,32,160	0/0:12,0:12:27.08:0,27,312	0/0:12,0:12:15.03:0,15,159	0/0:5,0:5:11.95:0,12,111	0/0:20,0:20:51.14:0,51,579	0/0:23,1:25:38.57:0,39,679	0/0:8,0:8:21.06:0,21,242	1/1:8,14:22:46.44:404,46,0	0/0:22,0:22:54.15:0,54,615	0/0:29,0:29:78.22:0,78,887	0/0:21,0:21:60.17:0,60,684	0/0:10,0:10:27.08:0,27,312	0/0:16,0:16:48.14:0,48,546	0/0:16,0:16:45.13:0,45,519	0/0:21,0:21:60.17:0,60,684	0/0:8,0:8:24.07:0,24,277	0/0:13,0:13:36.07:0,36,401	0/0:13,0:13:32.41:0,32,339	0/0:14,0:14:36.09:0,36,404	0/0:29,0:31:92.94:0,93,1033	0/0:20,0:20:57.16:0,57,649	0/0:26,0:26:75.15:0,75,841	0/0:24,0:24:66.18:0,66,745	0/0:6,0:6:18.05:0,18,208	0/0:19,0:19:54.12:0,54,595	1/1:4,20:24:30.81:462,31,0	1/1:2,27:29:81.03:741,81,0	1/1:0,2:2:6:55,6,0
chr10	1364676	.	TCACACTATGAAAGCA	T	53.55	PASS	AB=0.793;AC=5;AF=0.109;AN=46;BaseQRankSum=4.852;DP=685;FS=0.000;HRun=0;HaplotypeScore=110.2397;InbreedingCoeff=0.4346;MQ=40.89;MQ0=119;MQRankSum=-4.564;QD=1.03;ReadPosRankSum=-0.716;VQSLOD=1.8018;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/0:10,0:8:12.03:0,12,177	./.	./.	0/0:35,0:33:42.09:0,42,595	0/0:16,0:15:21.07:0,21,317	0/0:28,0:24:17.53:0,18,164	./.	1/1:19,0:8:2.94:18,3,0	0/0:28,0:28:69.42:0,69,961	0/0:19,0:18:30.10:0,30,482	0/0:18,0:18:26.75:0,27,398	0/0:14,0:13:33.08:0,33,499	0/0:18,0:17:18.04:0,18,319	0/0:23,0:22:42.13:0,42,718	0/0:20,0:20:39.12:0,39,707	./.	0/0:18,0:14:1.86:0,2,23	0/0:20,0:15:36.10:0,36,532	0/0:36,0:36:63.08:0,63,932	0/0:45,0:42:8.99:0,9,149	0/0:22,0:22:42.12:0,42,621	0/0:25,0:25:47.51:0,48,717	0/0:31,0:30:18.03:0,18,260	0/0:23,0:22:45.15:0,45,696	0/1:17,6:10:99:118,0,137	0/0:21,0:10:2.92:0,3,36	1/1:10,0:4:2.90:16,3,0
chr10	1364944	.	TCACACTCTGAAAGCA	T	48.93	PASS	AB=0.939;AC=4;AF=0.087;AN=46;BaseQRankSum=5.347;DP=750;FS=12.306;HRun=0;HaplotypeScore=99.1406;InbreedingCoeff=0.0163;MQ=34.79;MQ0=184;MQRankSum=-4.588;QD=0.53;ReadPosRankSum=-0.851;VQSLOD=1.2067;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:93,0:38:3:0,3,75	0/0:11,0:10:12.02:0,12,186	./.	./.	0/0:34,0:34:33.05:0,33,482	0/0:21,0:21:24.05:0,24,421	0/0:19,0:14:2.98:0,3,47	./.	./.	0/0:29,0:26:66.15:0,66,1167	0/0:15,0:15:15.04:0,15,317	0/0:14,0:14:6.02:0,6,148	0/0:15,0:14:11.78:0,12,187	0/0:15,0:14:9.03:0,9,193	0/0:18,0:17:26.92:0,27,385	0/0:22,0:21:21:0,21,295	./.	0/1:19,0:17:27.67:28,0,50	0/0:20,0:13:36.04:0,36,538	0/0:45,0:43:47.30:0,47,923	0/0:39,0:32:3.01:0,3,50	0/0:20,0:20:12.04:0,12,275	0/0:25,0:23:28.26:0,28,370	0/0:39,0:38:18.03:0,18,310	0/0:14,0:14:12.04:0,12,176	0/1:25,12:28:99:102,0,202	0/1:25,0:12:0:0,0,0	0/1:12,0:8:12.98:13,0,13
chr10	1365174	.	CTGAAAGCTCACACTA	C	731.71	PASS	AB=0.954;AC=7;AF=0.135;AN=52;BaseQRankSum=6.982;DP=690;FS=3.558;HRun=0;HaplotypeScore=201.3781;InbreedingCoeff=-0.0354;MQ=44.23;MQ0=105;MQRankSum=-5.524;QD=3.79;ReadPosRankSum=-3.794;VQSLOD=1.9258;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:19,0:5:4.98:122,0,5	0/0:12,0:12:32.84:0,33,469	./.	./.	0/0:25,0:25:60.75:0,61,807	0/0:24,0:23:62.68:0,63,807	0/0:19,0:19:26.67:0,27,185	0/1:12,11:7:6.84:78,0,7	0/1:33,0:22:65.48:65,0,155	0/0:20,0:20:54.04:0,54,624	0/0:28,0:27:71.92:0,72,992	0/0:15,0:15:38.71:0,39,379	0/0:20,0:20:41.80:0,42,500	0/0:18,0:18:38.99:0,39,662	0/0:28,0:28:68.78:0,69,869	0/0:21,0:21:50.81:0,51,762	0/1:30,0:21:99:160,0,313	0/0:15,0:15:35.81:0,36,361	0/0:21,0:15:45.02:0,45,640	0/0:26,0:26:68.88:0,69,834	0/0:34,0:34:95.60:0,96,1527	0/0:26,0:25:50.99:0,51,882	0/0:31,0:28:39.36:0,39,904	0/0:24,0:24:59.99:0,60,950	0/0:18,0:18:44.87:0,45,718	0/1:41,0:23:99:148,0,485	0/1:37,0:21:63.01:131,0,63	0/1:10,0:8:23.99:157,0,24
chr10	1365437	.	G	GA	4683.53	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-7.430;DP=657;FS=16.516;HRun=7;HaplotypeScore=67.1965;InbreedingCoeff=0.9990;MQ=84.76;MQ0=0;MQRankSum=-1.777;QD=26.76;ReadPosRankSum=0.521;VQSLOD=3.6344;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,22:25:60.18:725,60,0	0/0:12,0:12:36.06:0,36,347	0/0:30,0:30:62.10:0,62,605	0/0:15,0:13:26.99:0,27,240	0/0:31,0:30:71.97:0,72,668	0/0:25,0:25:69.10:0,69,662	0/0:24,0:23:60.09:0,60,579	1/1:7,24:31:69.14:772,69,0	1/1:5,19:24:51.16:616,51,0	0/0:25,0:25:69.11:0,69,666	0/0:29,0:29:78.06:0,78,737	0/0:23,0:23:54.07:0,54,521	0/0:14,0:14:36.04:0,36,343	0/0:19,0:20:56.12:0,56,523	0/0:14,0:14:38.27:0,38,355	0/0:14,0:14:33.03:0,33,313	1/1:1,28:29:69.21:834,69,0	0/0:20,0:19:60.02:0,60,557	0/0:19,0:19:45.06:0,45,430	0/0:32,0:32:93.08:0,93,876	0/0:33,0:33:87.09:0,87,821	0/0:33,0:33:84.08:0,84,795	0/0:28,0:28:77.79:0,78,730	0/0:20,0:20:57.07:0,57,544	0/0:21,0:21:54.03:0,54,504	1/1:5,26:31:52.25:890,52,0	1/1:4,21:26:51.02:593,51,0	1/1:1,7:8:21.06:254,21,0
chr10	1365644	.	GA	G	1903.44	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.000;DP=622;FS=1.779;HRun=2;HaplotypeScore=61.8101;InbreedingCoeff=0.9801;MQ=78.47;MQ0=0;MQRankSum=-0.501;QD=31.72;ReadPosRankSum=2.641;VQSLOD=3.4591;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,150,2215	0/0:6,0:6:18.06:0,18,270	0/0:24,0:24:72.24:0,72,1049	0/0:28,0:28:71.99:0,72,1030	0/0:28,0:28:84.28:0,84,1232	0/0:16,0:16:48.16:0,48,714	0/0:23,0:23:69.23:0,69,1034	0/0:23,0:23:69.23:0,69,1035	1/1:1,31:32:81.26:1052,81,0	0/0:16,0:16:48.16:0,48,720	0/0:23,0:23:69.23:0,69,1029	0/0:16,0:16:48.16:0,48,716	0/0:12,0:12:36.12:0,36,532	0/0:21,0:21:63.20:0,63,919	0/0:20,0:20:48.11:0,48,677	0/0:17,0:17:51.17:0,51,764	1/1:2,26:28:75.24:973,75,0	0/0:24,0:24:69.23:0,69,1034	0/0:14,0:14:42.14:0,42,620	0/0:24,0:24:72.23:0,72,1051	0/0:46,0:46:99:0,135,2001	0/0:14,0:14:42.10:0,42,604	0/0:12,0:12:33.10:0,33,474	0/0:29,0:29:87.29:0,87,1304	0/0:20,0:20:60.20:0,60,899	0/0:22,0:22:66.21:0,66,969	0/0:28,0:27:81.27:0,81,1205	0/0:4,0:4:12.04:0,12,180
chr10	1366192	.	C	CT	729.48	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=0.752;DP=290;FS=7.368;HRun=6;HaplotypeScore=33.8108;InbreedingCoeff=0.7680;MQ=71.32;MQ0=0;MQRankSum=-1.359;QD=22.11;ReadPosRankSum=0.547;VQSLOD=2.0215;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,9:10:24.08:302,24,0	0/0:5,0:5:12.02:0,12,122	0/0:5,0:5:6.01:0,6,60	0/0:4,0:4:2.99:0,3,24	0/0:23,0:23:63.12:0,63,635	0/0:11,0:11:33.08:0,33,337	0/0:2,0:2:6.01:0,6,61	0/0:15,0:15:36.06:0,36,357	1/1:1,6:7:15.05:189,15,0	0/0:13,0:13:39.09:0,39,397	0/0:11,0:11:30.07:0,30,306	0/0:10,0:10:27.06:0,27,275	0/0:5,0:5:12.03:0,12,122	0/0:3,0:3:9.02:0,9,92	0/0:8,0:8:24.05:0,24,245	0/0:4,0:4:12.03:0,12,122	1/1:4,12:15:30.10:377,30,0	0/0:12,0:12:27.06:0,27,275	0/0:12,0:12:30.07:0,30,306	0/0:14,0:14:42.10:0,42,428	0/0:3,0:3:9.02:0,9,92	0/0:2,0:2:6:0,6,54	0/0:12,0:12:30.07:0,30,306	0/0:4,0:4:9.02:0,9,92	0/0:12,0:12:27.06:0,27,275	0/0:25,0:25:69.14:0,69,698	0/0:25,0:25:72.10:0,72,711	0/0:17,0:17:39.09:0,39,398
chr10	1367529	.	ATTC	A	1518.23	PASS	AB=0.944;AC=9;AF=0.161;AN=56;BaseQRankSum=6.507;DP=548;FS=48.829;HRun=0;HaplotypeScore=82.2296;InbreedingCoeff=0.6677;MQ=55.56;MQ0=10;MQRankSum=-5.358;QD=18.29;ReadPosRankSum=-0.968;VQSLOD=1.4781;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:23:26.93:0,27,398	0/0:9,0:9:27.07:0,27,466	0/0:25,0:15:32.73:0,33,446	0/0:18,0:13:36.05:0,36,550	0/0:17,0:17:45.13:0,45,830	0/0:33,0:33:75.24:0,75,1428	0/0:23,0:21:42.13:0,42,780	1/1:16,7:21:42.08:556,42,0	0/1:18,0:16:1.90:134,0,2	0/0:18,0:18:45.15:0,45,808	0/0:9,0:9:21.07:0,21,390	0/0:22,0:21:54.19:0,54,1028	0/0:14,0:14:36.12:0,36,741	0/0:30,0:30:78.27:0,78,1483	0/0:16,0:16:39.12:0,39,731	0/0:23,0:23:57.20:0,57,1154	0/1:4,0:4:12.88:52,0,13	0/0:12,0:12:30.08:0,30,514	0/0:18,0:17:42.14:0,42,796	0/0:25,0:25:66.23:0,66,1311	0/0:51,0:51:99:0,140,2631	0/0:16,0:16:33.11:0,33,654	0/0:18,0:18:50.95:0,51,850	0/0:32,0:31:62.17:0,62,1445	0/0:12,0:12:33.07:0,33,571	0/1:12,3:14:38.83:270,0,39	1/1:8,6:12:33.11:482,33,0	1/1:7,2:9:15.02:181,15,0
chr10	1367536	.	TTCTTCTTCC	T	2130.21	PASS	AB=0.958;AC=9;AF=0.161;AN=56;BaseQRankSum=6.593;DP=542;FS=42.385;HRun=0;HaplotypeScore=143.2562;InbreedingCoeff=0.6729;MQ=54.93;MQ0=13;MQRankSum=-5.737;QD=26.96;ReadPosRankSum=-0.888;VQSLOD=1.4890;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:23:44.06:0,44,532	0/0:9,0:9:27.07:0,27,777	0/0:24,0:15:33.97:0,34,471	0/0:18,0:13:38.09:0,38,609	0/0:16,0:16:45.13:0,45,1436	0/0:31,0:31:81.26:0,81,2934	0/0:22,0:17:15.63:0,16,1315	1/1:23,0:18:42.08:556,42,0	0/1:19,0:17:0.97:285,0,1	0/0:18,0:18:48.16:0,48,1274	0/0:9,0:9:24.08:0,24,718	0/0:20,0:19:54.19:0,54,1634	0/0:13,0:13:36.12:0,36,1344	0/0:30,0:30:78.27:0,78,2602	0/0:14,0:14:39.12:0,39,1162	0/0:23,0:23:60.21:0,60,2194	0/1:3,0:3:12.88:90,0,13	0/0:12,0:12:33.09:0,33,989	0/0:20,0:20:48.16:0,48,1493	0/0:24,0:23:66.23:0,66,2407	0/0:56,0:56:99:0,136,4766	0/0:14,0:14:33.11:0,33,1207	0/0:21,0:21:59.98:0,60,1576	0/0:32,0:31:73.82:0,74,2899	0/0:13,0:13:36.11:0,36,1010	0/1:12,2:12:99:364,0,102	1/1:12,3:13:21.97:735,22,0	1/1:4,1:5:15.02:258,15,0
chr10	1367542	.	TTCCTCTTCC	T	1471.97	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=9.951;DP=530;FS=46.876;HRun=0;HaplotypeScore=143.9316;InbreedingCoeff=0.8116;MQ=54.31;MQ0=15;MQRankSum=-5.994;QD=18.40;ReadPosRankSum=-0.876;VQSLOD=1.4249;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:21:44.67:0,45,479	0/0:8,0:8:21.07:0,21,729	0/0:20,0:12:4.05:0,4,308	0/0:16,0:12:32.11:0,32,511	0/0:14,0:14:42.14:0,42,1451	0/0:29,0:29:81.22:0,81,3071	0/0:24,0:19:15.65:0,16,1343	1/1:25,0:20:33.69:214,34,0	1/1:3,9:15:15.91:425,16,0	0/0:19,0:18:51.17:0,51,1371	0/0:8,0:8:24.07:0,24,704	0/0:22,0:21:63.18:0,63,1729	0/0:13,0:13:36.12:0,36,1387	0/0:28,0:28:78.26:0,78,2586	0/0:15,0:14:39.13:0,39,1177	0/0:22,0:22:60.19:0,60,2207	1/1:0,0:2:6.02:139,6,0	0/0:14,0:13:30.09:0,30,993	0/0:19,0:18:50.96:0,51,1537	0/0:24,0:23:69.22:0,69,2447	0/0:56,0:55:99:0,115,4854	0/0:11,0:11:33.11:0,33,1216	0/0:20,0:20:51.17:0,51,1560	0/0:32,0:31:38.68:0,39,2991	0/0:13,0:13:36.10:0,36,1039	0/1:14,0:12:99:190,0,124	1/1:17,0:16:25.75:520,26,0	1/1:5,0:5:8.99:154,9,0
chr10	1367581	.	TTCC	T	741.93	PASS	AB=0.891;AC=7;AF=0.140;AN=50;BaseQRankSum=9.319;DP=511;FS=30.717;HRun=0;HaplotypeScore=86.9399;InbreedingCoeff=0.3860;MQ=48.33;MQ0=39;MQRankSum=-8.995;QD=8.63;ReadPosRankSum=2.066;VQSLOD=1.4875;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:14:17.81:0,18,271	0/0:8,0:8:21.05:0,21,369	./.	./.	0/0:14,0:14:36.11:0,36,727	0/0:30,0:29:78.26:0,78,1701	0/0:28,0:19:44.85:0,45,1008	0/1:31,3:15:99:115,0,197	1/1:14,0:12:1.56:153,2,0	0/0:17,0:14:36.12:0,36,802	0/0:11,0:11:30.09:0,30,624	0/0:18,0:15:42.11:0,42,830	0/0:16,0:14:33.11:0,33,735	0/0:20,0:19:45.15:0,45,989	0/0:15,0:14:39.11:0,39,804	0/0:15,0:15:39.13:0,39,872	./.	0/0:20,0:19:54.12:0,54,1118	0/0:21,0:12:30.10:0,30,648	0/0:21,0:19:57.17:0,57,1200	0/0:56,0:49:99:0,135,2820	0/0:15,0:15:36.08:0,36,778	0/0:17,0:17:51.18:0,51,1147	0/0:50,0:45:84.28:0,84,2347	0/0:13,0:13:36.12:0,36,780	0/1:20,1:11:78.12:230,0,78	0/1:9,3:10:33.75:255,0,34	1/1:5,0:4:12.01:115,12,0
chr10	1367584	.	CTCT	C	1021.17	PASS	AB=0.784;AC=7;AF=0.140;AN=50;BaseQRankSum=9.211;DP=501;FS=32.605;HRun=0;HaplotypeScore=86.4949;InbreedingCoeff=0.4731;MQ=48.12;MQ0=39;MQRankSum=-8.883;QD=12.16;ReadPosRankSum=0.909;VQSLOD=1.5697;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:15:15.24:0,15,196	0/0:7,0:7:18.06:0,18,363	./.	./.	0/0:14,0:14:39.12:0,39,758	0/0:31,0:30:71.57:0,72,1646	0/0:29,0:20:50.71:0,51,1065	0/1:28,5:14:99:176,0,200	1/1:8,5:11:13.50:242,13,0	0/0:16,0:13:36.12:0,36,785	0/0:10,0:10:27.09:0,27,614	0/0:17,0:14:39.13:0,39,824	0/0:16,0:14:36.11:0,36,752	0/0:19,0:18:45.14:0,45,966	0/0:14,0:13:36.12:0,36,786	0/0:15,0:15:39.13:0,39,874	./.	0/0:20,0:19:54.18:0,54,1166	0/0:22,0:13:36.10:0,36,679	0/0:20,0:18:51.17:0,51,1127	0/0:52,0:45:99:0,131,2713	0/0:15,0:15:36.12:0,36,766	0/0:17,0:17:51.17:0,51,1114	0/0:49,0:44:87.56:0,88,2390	0/0:13,0:13:39.12:0,39,798	0/1:15,6:11:60.57:334,0,61	0/1:7,5:10:31.90:275,0,32	1/1:3,2:4:11.88:128,12,0
chr10	1367605	.	CTCT	C	45.09	PASS	AB=0.903;AC=3;AF=0.058;AN=52;BaseQRankSum=5.858;DP=504;FS=1.182;HRun=0;HaplotypeScore=87.4860;InbreedingCoeff=-0.0643;MQ=47.82;MQ0=45;MQRankSum=-5.575;QD=0.90;ReadPosRankSum=-1.581;VQSLOD=1.5656;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:10,7:13:62.19:84,0,62	0/0:6,0:5:15.05:0,15,346	./.	./.	0/0:12,0:12:33.03:0,33,661	0/0:28,0:27:65.45:0,65,1237	0/0:31,0:20:54.14:0,54,1134	0/0:32,0:13:26.32:0,26,228	0/1:11,0:10:47.88:48,0,53	0/0:21,0:19:54.18:0,54,1097	0/0:12,0:12:33.10:0,33,718	0/0:19,0:16:48.15:0,48,1038	0/0:17,0:15:39.13:0,39,857	0/0:14,0:13:30.07:0,30,560	0/0:14,0:13:39.11:0,39,852	0/0:14,0:14:33.10:0,33,662	0/0:3,0:1:3.01:0,3,44	0/0:21,0:20:57.14:0,57,1219	0/0:17,0:10:30.09:0,30,553	0/0:19,0:17:51.17:0,51,1116	0/0:51,0:42:99:0,123,2662	0/0:20,0:20:51.15:0,51,1081	0/0:18,0:17:51.15:0,51,1053	0/0:50,0:45:81.24:0,81,2302	0/0:19,0:19:38.79:0,39,1174	0/1:22,0:12:3.19:3,0,159	0/0:11,0:9:15.78:0,16,164	0/0:5,0:4:4.88:0,5,21
chr10	1367641	.	CTCT	C	373.76	PASS	AB=1.000;AC=10;AF=0.200;AN=50;BaseQRankSum=6.699;DP=465;FS=5.956;HRun=0;HaplotypeScore=73.6661;InbreedingCoeff=0.6087;MQ=50.03;MQ0=40;MQRankSum=-5.992;QD=7.95;ReadPosRankSum=-0.222;VQSLOD=1.7532;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:14,0:10:28.74:145,0,29	0/0:11,0:10:29.83:0,30,495	./.	./.	0/0:17,0:17:51.05:0,51,1033	0/0:21,0:21:51.16:0,51,1007	0/0:28,0:21:54.16:0,54,1005	./.	1/1:0,5:5:9.03:143,9,0	0/0:21,0:20:60.20:0,60,1237	0/0:14,0:13:36.11:0,36,718	0/0:23,0:19:54.13:0,54,987	0/0:18,0:16:39.51:0,40,636	0/0:9,0:8:21.06:0,21,436	0/0:17,0:17:51.15:0,51,940	0/0:9,0:8:15.05:0,15,296	1/1:3,1:1:3.01:48,3,0	0/0:23,0:22:60.07:0,60,1070	0/0:21,0:8:21.05:0,21,369	0/0:17,0:16:45.15:0,45,945	0/0:36,0:32:87.20:0,87,1670	0/0:25,0:25:72.19:0,72,1382	0/0:18,0:18:39.06:0,39,714	0/0:49,0:45:99:0,111,2007	0/0:27,0:26:78.16:0,78,1498	0/1:13,0:7:19.22:19,0,102	1/1:8,0:4:9.03:135,9,0	1/1:3,0:2:2.99:24,3,0
chr10	1367650	.	TTCC	T	99.53	PASS	AB=0.920;AC=8;AF=0.143;AN=56;BaseQRankSum=5.273;DP=455;FS=9.190;HRun=0;HaplotypeScore=65.8462;InbreedingCoeff=0.4249;MQ=49.47;MQ0=37;MQRankSum=-4.986;QD=1.91;ReadPosRankSum=0.144;VQSLOD=0.4919;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:9:16.52:0,17,155	0/0:9,0:9:27.09:0,27,621	0/0:6,0:2:6.02:0,6,84	0/0:4,0:1:3.01:0,3,67	0/0:19,0:19:57.19:0,57,1225	0/0:19,0:19:48.15:0,48,1007	0/0:28,0:21:54.18:0,54,1098	0/1:13,0:1:0:0,0,0	0/1:6,0:6:9.63:70,0,10	0/0:22,0:20:60.21:0,60,1315	0/0:12,0:11:30.09:0,30,646	0/0:19,0:16:48.15:0,48,1047	0/0:16,0:14:36.12:0,36,734	0/0:11,0:9:24.08:0,24,524	0/0:19,0:19:54.15:0,54,1021	0/0:7,0:6:15.02:0,15,272	1/1:4,0:1:3.01:30,3,0	0/0:24,0:23:63.14:0,63,1264	0/0:20,0:8:21.07:0,21,435	0/0:14,0:13:36.12:0,36,829	0/0:33,0:28:78.20:0,78,1594	0/0:24,0:24:69.02:0,69,1434	0/0:15,0:15:39.05:0,39,760	0/0:44,0:41:99:0,105,2192	0/0:26,0:25:72.25:0,72,1609	0/1:11,3:7:59.04:59,0,143	1/1:4,5:5:7.24:57,7,0	0/1:5,1:5:0.01:0,0,20
chr10	1367671	.	CTCT	C	70.07	PASS	AB=0.813;AC=3;AF=0.056;AN=54;BaseQRankSum=4.597;DP=432;FS=1.646;HRun=0;HaplotypeScore=66.7473;InbreedingCoeff=0.3345;MQ=51.02;MQ0=18;MQRankSum=-4.440;QD=3.05;ReadPosRankSum=0.213;VQSLOD=1.7148;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:7:0.26:0,0,31	0/0:9,0:9:27.09:0,27,548	0/0:19,0:4:11.91:0,12,175	0/0:16,0:7:15:0,15,213	0/0:21,0:21:60.17:0,60,1181	0/0:18,0:18:45.13:0,45,873	0/0:20,0:16:42.01:0,42,767	./.	0/0:7,0:7:10.76:0,11,101	0/0:20,0:19:57.18:0,57,1178	0/0:11,0:10:24.06:0,24,464	0/0:19,0:17:33.43:0,33,929	0/0:15,0:13:30.09:0,30,592	0/0:14,0:12:22.89:0,23,486	0/0:14,0:14:39.13:0,39,867	0/0:8,0:7:18.06:0,18,383	0/0:3,0:1:3.01:0,3,46	0/0:21,0:21:60.18:0,60,1216	0/0:11,0:9:24.08:0,24,458	0/0:16,0:15:45.10:0,45,918	0/0:21,0:18:45.05:0,45,846	0/0:25,0:25:75.07:0,75,1537	0/0:14,0:14:33.10:0,33,689	0/0:37,0:34:90.06:0,90,1757	0/0:32,0:31:71.28:0,71,1802	0/1:10,3:6:57.18:82,0,57	1/1:2,8:5:6.02:82,6,0	0/0:2,2:4:3:0,3,28
chr10	1367694	.	T	TC	216.65	PASS	AB=0.800;AC=9;AF=0.167;AN=54;BaseQRankSum=7.162;DP=394;FS=0.000;HRun=0;HaplotypeScore=51.4858;InbreedingCoeff=0.4788;MQ=47.97;MQ0=19;MQRankSum=-6.683;QD=3.49;ReadPosRankSum=-1.934;VQSLOD=2.4213;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:3,1:3:7.45:20,0,7	0/0:9,0:9:23.01:0,23,317	0/0:30,0:7:21.04:0,21,266	0/0:16,0:6:11.69:0,12,167	0/0:18,0:18:51.17:0,51,694	0/0:13,1:13:33.11:0,33,458	0/1:13,1:13:44.99:45,0,304	1/1:8,0:6:3.30:27,3,0	1/1:3,2:4:8.87:59,9,0	0/0:21,0:19:11.13:0,11,663	0/0:8,0:7:18.05:0,18,231	0/0:17,0:16:44.94:0,45,586	0/0:13,0:13:7.03:0,7,354	0/0:12,0:12:27.04:0,27,353	0/0:15,0:13:36.12:0,36,500	0/0:6,1:6:12.04:0,12,167	./.	0/0:15,0:15:45.15:0,45,626	0/0:14,0:11:30.10:0,30,408	0/0:10,0:10:30.07:0,30,369	0/0:12,0:10:27.09:0,27,363	0/0:24,0:24:45.26:0,45,811	0/0:12,0:12:33.10:0,33,432	0/0:32,0:27:61.16:0,61,831	0/0:25,0:25:57.56:0,58,959	0/1:9,9:9:23.84:100,0,24	1/1:9,4:7:11.86:107,12,0	0/0:3,3:4:2.84:0,3,14
chr10	1368294	.	TA	T	5786.85	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=16.162;DP=607;FS=1.073;HRun=4;HaplotypeScore=78.6284;InbreedingCoeff=0.9801;MQ=71.20;MQ0=0;MQRankSum=-2.515;QD=31.62;ReadPosRankSum=2.199;VQSLOD=5.3697;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,33:33:87.27:1043,87,0	0/0:15,0:15:45.14:0,45,613	0/0:22,0:21:53.96:0,54,673	0/0:24,0:22:49.50:0,50,539	0/0:24,0:24:63.21:0,63,879	0/0:23,0:23:66.21:0,66,907	0/0:22,0:22:63.19:0,63,860	1/1:3,26:27:72.22:864,72,0	1/1:3,23:26:72.21:853,72,0	0/0:28,0:28:78.26:0,78,1092	0/0:28,0:28:81.25:0,81,1101	0/0:16,0:16:48.16:0,48,672	0/0:9,0:9:27.09:0,27,377	0/0:16,0:16:48.15:0,48,655	0/0:24,0:24:69.18:0,69,932	0/0:13,1:14:6.13:0,6,510	1/1:2,26:28:75.23:898,75,0	0/0:12,0:12:36.12:0,36,504	0/0:20,0:20:60.17:0,60,816	0/0:24,0:24:72.24:0,72,1008	0/0:23,0:23:66.17:0,66,866	0/0:18,0:18:54.14:0,54,729	0/0:22,0:22:54.16:0,54,724	0/0:21,0:21:29.41:0,29,803	0/0:19,0:18:54.18:0,54,756	1/1:3,22:25:21.15:665,21,0	1/1:2,32:34:99:1177,99,0	1/1:0,8:8:24.07:288,24,0
chr10	1369315	.	TG	T	720.61	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.530;DP=516;FS=7.715;HRun=1;HaplotypeScore=47.2535;InbreedingCoeff=0.9710;MQ=57.35;MQ0=4;MQRankSum=2.530;QD=30.03;ReadPosRankSum=1.019;VQSLOD=2.6743;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,23:23:60.16:815,60,0	0/0:9,0:9:27.05:0,27,358	0/0:27,0:19:57.14:0,57,773	0/0:10,0:9:27.07:0,27,380	0/0:22,0:22:63.20:0,63,924	0/0:28,0:28:84.21:0,84,1155	0/0:12,0:12:36.08:0,36,478	0/0:31,0:31:93.28:0,93,1319	0/0:13,0:13:39.12:0,39,564	0/0:16,0:16:48.14:0,48,696	0/0:18,0:18:48.15:0,48,699	0/0:6,0:6:18.05:0,18,249	0/0:9,0:9:27.07:0,27,383	0/0:8,0:8:24.08:0,24,359	0/0:15,0:15:45.15:0,45,673	0/0:19,0:19:57.19:0,57,853	0/0:27,0:27:78.13:0,78,1030	0/0:22,0:22:57.16:0,57,827	0/0:21,0:18:54.16:0,54,771	0/0:32,0:32:96.31:0,96,1413	0/0:12,0:12:36.09:0,36,498	0/0:22,0:22:66.19:0,66,945	0/0:31,0:31:90.28:0,90,1322	0/0:10,0:10:30.02:0,30,419	0/0:15,0:15:45.15:0,45,672	0/0:20,0:20:54.15:0,54,767	0/0:30,0:29:90.21:0,90,1240	0/0:7,0:6:15.01:0,15,198
chr10	1370322	.	C	CT	325.53	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.096;DP=537;FS=0.859;HRun=10;HaplotypeScore=58.4341;InbreedingCoeff=0.7288;MQ=63.76;MQ0=0;MQRankSum=-5.215;QD=12.52;ReadPosRankSum=-1.346;VQSLOD=2.9810;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,17:25:3.92:404,4,0	0/0:13,0:13:29.95:0,30,246	0/0:15,0:14:7.06:0,7,157	0/0:16,1:15:16.69:0,17,197	0/0:28,0:28:65.89:0,66,542	0/0:17,0:17:35.94:0,36,296	0/0:8,0:8:17.96:0,18,148	0/0:30,1:33:40.11:0,40,519	0/0:14,0:14:29.92:0,30,243	0/0:25,0:25:71.90:0,72,588	0/0:26,0:27:73.92:0,74,591	0/0:13,0:13:35.96:0,36,296	0/0:15,0:15:32.65:0,33,289	0/0:11,0:12:28.99:0,29,228	0/0:13,0:13:29.95:0,30,246	0/0:12,0:13:28.99:0,29,228	0/0:15,0:15:35.90:0,36,290	0/0:19,0:19:32.90:0,33,354	0/0:22,1:23:24.94:0,25,411	0/0:35,0:37:81.93:0,82,649	0/0:18,0:19:43.98:0,44,351	0/0:16,0:17:49.96:0,50,397	0/0:23,0:23:62.91:0,63,517	0/0:10,0:10:23.96:0,24,197	0/0:16,0:16:47.95:0,48,394	0/0:24,0:26:60.97:0,61,480	0/0:25,0:24:65.89:0,66,541	0/0:15,0:15:35.94:0,36,296
chr10	1371188	.	A	AT	6609.12	PASS	AB=0.917;AC=15;AF=0.268;AN=56;BaseQRankSum=-13.682;DP=704;FS=3.167;HRun=7;HaplotypeScore=66.9171;InbreedingCoeff=0.9375;MQ=58.04;MQ0=0;MQRankSum=-0.657;QD=28.12;ReadPosRankSum=-1.121;VQSLOD=5.2048;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:2,34:38:85.74:1043,86,0	0/0:10,0:10:30.05:0,30,290	0/0:15,0:14:39.53:0,40,377	0/0:19,0:15:36.04:0,36,341	0/0:34,0:34:93.11:0,93,888	0/0:42,0:42:99:0,114,1095	0/0:15,0:15:45.06:0,45,429	1/1:5,28:33:84.24:1001,84,0	1/1:3,25:28:75.23:906,75,0	0/0:42,0:42:99:0,114,1095	0/0:24,0:24:60.10:0,60,579	0/0:19,0:19:51.06:0,51,487	0/0:15,0:15:42.07:0,42,405	0/0:20,0:20:54.08:0,54,521	0/0:20,0:20:54.08:0,54,521	0/1:10,1:11:3.19:3,0,257	1/1:7,21:28:54.99:685,55,0	0/0:18,0:20:54.35:0,54,496	0/0:21,0:21:63.09:0,63,604	0/0:33,0:34:99:0,101,959	0/0:25,0:25:72.11:0,72,695	0/0:29,0:29:84.13:0,84,811	0/0:21,0:21:54.09:0,54,521	0/0:18,0:18:51.08:0,51,493	0/0:26,0:26:66.09:0,66,632	1/1:5,27:32:58.28:978,58,0	1/1:6,41:46:99:1413,117,0	1/1:0,18:18:48.15:580,48,0
chr10	1373064	.	GAGAGAGACAGAGAGAGAGAC	G	1708.67	PASS	AB=1.000;AC=6;AF=0.107;AN=56;BaseQRankSum=6.273;DP=748;FS=5.833;HRun=0;HaplotypeScore=361.8720;InbreedingCoeff=0.2582;MQ=65.09;MQ0=9;MQRankSum=-3.067;QD=11.24;ReadPosRankSum=-0.764;VQSLOD=1.1994;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:39,0:35:99:146,0,294	0/0:16,0:16:39.13:0,39,2720	0/0:34,0:24:7.79:0,8,192	0/1:44,0:21:8.43:8,0,196	0/0:29,0:29:69.22:0,69,4091	0/0:30,0:30:72.23:0,72,4376	0/0:28,0:28:69.22:0,69,3962	0/0:25,0:24:45.14:0,45,1261	1/1:6,19:25:30.10:1554,30,0	0/0:34,0:34:78.23:0,78,3819	0/0:33,0:33:81.28:0,81,4730	0/0:18,0:18:48.15:0,48,2950	0/0:14,0:14:36.10:0,36,2268	0/0:16,0:16:45.15:0,45,3433	0/0:24,0:24:60.19:0,60,3471	0/0:18,0:18:54.15:0,54,3565	0/1:27,0:27:99:117,0,546	0/0:14,0:14:39.13:0,39,2626	0/0:23,0:22:45.13:0,45,1353	0/0:46,0:46:99:0,114,5697	0/0:19,0:19:54.17:0,54,3711	0/0:35,0:35:84.27:0,84,5637	0/0:25,0:25:46.37:0,46,2475	0/1:17,0:17:10.28:10,0,2136	0/0:19,0:19:51.18:0,51,3665	0/0:44,0:43:99:0,114,6608	0/0:42,0:40:99:0,108,7424	0/0:10,0:10:30.10:0,30,989
chr10	1373072	.	CAGAG	C	773.70	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=5.986;DP=742;FS=10.238;HRun=0;HaplotypeScore=139.6264;InbreedingCoeff=0.7716;MQ=64.08;MQ0=12;MQRankSum=-3.070;QD=7.44;ReadPosRankSum=0.731;VQSLOD=2.4008;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:32,7:35:23.75:498,24,0	0/0:14,0:14:39.13:0,39,948	0/0:29,0:21:22.90:0,23,188	0/1:42,0:18:5.96:6,0,159	0/0:30,0:30:75.24:0,75,1590	0/0:25,0:25:75.24:0,75,1657	0/0:29,0:29:81.24:0,81,1683	0/0:27,0:26:51.16:0,51,898	1/1:23,0:23:30.09:395,30,0	0/0:34,0:34:84.25:0,84,1623	0/0:31,0:31:81.28:0,81,1801	0/0:21,0:21:57.17:0,57,1191	0/0:15,0:15:42.10:0,42,830	0/0:19,0:19:54.19:0,54,1228	0/0:24,0:24:69.22:0,69,1457	0/0:21,0:21:63.19:0,63,1359	0/0:25,0:25:5.05:0,5,644	0/0:15,0:15:42.08:0,42,872	0/0:23,0:20:54.14:0,54,856	0/0:43,0:43:99:0,117,2414	0/0:23,0:23:66.21:0,66,1432	0/0:34,0:34:90.28:0,90,2026	0/0:18,0:18:49.38:0,49,976	0/0:19,0:19:44.21:0,44,971	0/0:22,0:22:60.21:0,60,1390	0/0:43,0:42:99:0,114,2425	0/0:41,0:39:99:0,117,2719	0/0:13,0:13:39.11:0,39,677
chr10	1373076	.	G	GAGAC	726.46	PASS	AB=1.000;AC=4;AF=0.071;AN=56;BaseQRankSum=3.202;DP=727;FS=14.545;HRun=0;HaplotypeScore=142.2459;InbreedingCoeff=0.4908;MQ=62.14;MQ0=13;MQRankSum=-0.711;QD=7.49;ReadPosRankSum=0.289;VQSLOD=2.0782;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:27,12:35:30.81:619,31,0	0/0:13,0:13:39.13:0,39,739	0/0:24,0:17:22.43:0,22,187	0/1:38,0:13:5.96:6,0,159	0/0:30,0:30:75.24:0,75,1382	0/0:25,0:25:75.24:0,75,1371	0/0:30,0:30:80.69:0,81,1399	0/0:22,0:21:57.15:0,57,921	0/1:20,0:20:80.40:212,0,80	0/0:32,0:32:90.26:0,90,1451	0/0:30,0:30:84.26:0,84,1541	0/0:21,0:21:60.16:0,60,1025	0/0:14,0:14:42.10:0,42,718	0/0:20,0:20:57.18:0,57,1024	0/0:24,0:24:69.22:0,69,1224	0/0:21,0:21:63.18:0,63,1105	0/0:24,0:26:53.80:0,54,845	0/0:16,0:16:42.09:0,42,737	0/0:26,0:22:58.33:0,58,884	0/0:46,0:46:99:0,123,2099	0/0:24,0:24:69.21:0,69,1204	0/0:31,0:31:90.28:0,90,1621	0/0:19,0:19:49.38:0,49,838	0/0:19,0:19:51.14:0,51,892	0/0:22,0:22:63.20:0,63,1153	0/0:41,0:40:99:0,117,1987	0/0:41,0:39:99:0,117,2175	0/0:13,0:13:33.06:0,33,580
chr10	1373092	.	CAG	C	423.79	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=7.656;DP=706;FS=0.000;HRun=0;HaplotypeScore=109.5230;InbreedingCoeff=0.5455;MQ=55.52;MQ0=14;MQRankSum=-4.304;QD=9.02;ReadPosRankSum=-0.358;VQSLOD=2.9133;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:36:45.97:0,46,645	0/0:14,0:14:36.11:0,36,605	0/0:13,0:9:4.43:0,4,215	0/0:26,1:9:6.85:0,7,108	0/0:33,0:33:81.26:0,81,1342	0/0:23,0:23:66.21:0,66,1117	0/0:29,0:29:84.27:0,84,1421	0/0:26,0:25:69.22:0,69,1159	0/1:22,0:22:58.76:187,0,59	0/0:25,0:25:66.16:0,66,1123	0/0:29,0:29:72.23:0,72,1197	0/0:22,0:22:60.16:0,60,956	0/0:13,0:13:36.12:0,36,628	0/0:21,0:21:63.16:0,63,1036	0/0:22,0:22:66.21:0,66,1131	0/0:24,0:24:63.19:0,63,1042	1/1:22,3:25:16.78:340,17,0	0/0:17,0:17:51.14:0,51,871	0/0:25,0:19:47.93:0,48,774	0/0:41,1:42:70.19:0,70,1569	0/0:24,0:24:66.23:0,66,1159	0/0:34,0:34:96.33:0,96,1683	0/0:17,0:17:45.15:0,45,784	0/0:22,0:22:54.18:0,54,922	0/0:25,0:25:69.22:0,69,1196	0/0:41,0:40:99:0,117,1962	0/0:41,0:38:99:0,105,1832	0/0:10,0:10:30.05:0,30,470
chr10	1373200	.	GAGAC	G	796.34	PASS	AB=0.873;AC=3;AF=0.054;AN=56;BaseQRankSum=3.900;DP=768;FS=21.154;HRun=0;HaplotypeScore=130.3038;InbreedingCoeff=-0.0591;MQ=52.07;MQ0=63;MQRankSum=1.222;QD=6.87;ReadPosRankSum=-1.689;VQSLOD=1.2293;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:17,16:28:99:864,0,202	0/0:5,0:5:15.05:0,15,357	0/0:37,0:2:2.97:0,3,20	0/1:65,0:6:18.65:19,0,79	0/0:12,0:11:33.11:0,33,824	0/0:13,0:11:33.10:0,33,797	0/0:27,0:27:74.43:0,74,1731	0/0:50,0:37:84.25:0,84,1801	0/0:49,0:45:99:0,120,2687	0/0:26,0:24:66.22:0,66,1564	0/0:21,0:20:57.18:0,57,1388	0/0:30,0:30:84.29:0,84,2091	0/0:17,0:17:48.16:0,48,1172	0/0:26,0:26:69.24:0,69,1665	0/0:19,0:19:54.17:0,54,1266	0/0:28,0:28:72.23:0,72,1783	0/0:55,0:55:99:0,141,3118	0/0:18,0:17:45.11:0,45,1082	0/0:22,0:13:33.09:0,33,715	0/0:25,0:23:57.20:0,57,1424	0/0:44,0:42:99:0,108,2669	0/0:19,0:19:48.13:0,48,1088	0/0:16,0:16:42.14:0,42,1042	0/0:31,0:31:87.26:0,87,2060	0/0:2,0:2:6.01:0,6,97	0/0:28,0:28:75.23:0,75,1785	0/0:32,0:32:90.29:0,90,2180	0/1:16,1:17:5.23:5,0,937
chr10	1373298	.	G	GAGAC	2280.72	PASS	AB=0.889;AC=9;AF=0.161;AN=56;BaseQRankSum=1.653;DP=847;FS=8.286;HRun=0;HaplotypeScore=161.1975;InbreedingCoeff=0.3375;MQ=66.81;MQ0=22;MQRankSum=-1.557;QD=8.42;ReadPosRankSum=-2.844;VQSLOD=1.1929;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,2:42:77.71:0,78,1338	0/0:12,0:12:36.12:0,36,645	0/0:43,0:25:59.50:0,59,826	0/1:73,0:40:24.28:24,0,656	0/0:23,0:23:66.21:0,66,1118	0/0:24,0:24:57.16:0,57,961	0/0:29,0:29:69.24:0,69,1219	0/1:41,0:37:99:170,0,955	1/1:6,7:24:30.10:654,30,0	0/0:36,0:34:93.03:0,93,1545	0/0:32,0:32:84.27:0,84,1462	0/0:23,0:23:66.21:0,66,1146	0/0:21,0:21:63.22:0,63,1105	0/0:33,0:33:99:0,99,1644	0/0:27,0:27:69.24:0,69,1214	0/0:26,0:26:29.21:0,29,1141	1/1:7,0:20:25.33:477,25,0	0/0:20,1:20:54.18:0,54,948	0/0:24,0:21:54.17:0,54,896	0/0:32,0:31:81.24:0,81,1352	0/0:49,0:48:99:0,102,2030	0/0:20,0:20:57.18:0,57,984	0/0:20,0:19:51.11:0,51,880	0/0:23,0:22:66.20:0,66,1114	0/0:14,0:13:36.10:0,36,588	0/1:31,14:44:99:793,0,1234	0/1:39,4:43:99:131,0,1453	0/1:15,5:19:99:185,0,651
chr10	1375071	.	AG	A	1331.75	PASS	AB=0.676;AC=8;AF=0.143;AN=56;BaseQRankSum=10.364;DP=533;FS=1.158;HRun=1;HaplotypeScore=87.7474;InbreedingCoeff=0.1372;MQ=51.40;MQ0=9;MQRankSum=-8.932;QD=12.93;ReadPosRankSum=0.258;VQSLOD=2.3823;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:5,8:13:7.80:174,0,8	0/0:6,0:6:18.06:0,18,285	0/0:30,0:11:20.60:0,21,310	0/0:27,1:8:24.08:0,24,345	0/0:24,0:24:72.09:0,72,1039	0/0:27,0:27:75.19:0,75,1146	0/0:13,0:13:17.31:0,17,382	0/1:21,4:18:99:119,0,318	1/1:6,7:12:16.24:287,16,0	0/0:25,0:25:75.23:0,75,1129	0/0:28,0:28:84.27:0,84,1295	0/0:12,0:12:36.09:0,36,544	0/0:16,0:16:48.16:0,48,763	0/0:22,0:22:66.22:0,66,1037	0/0:14,0:14:36.03:0,36,498	0/0:12,0:12:30.09:0,30,454	0/1:3,5:8:68.95:185,0,69	0/0:14,0:13:5.29:0,5,415	0/0:16,0:15:45.15:0,45,692	0/0:37,0:37:99:0,111,1737	0/0:14,0:13:33.11:0,33,524	0/0:21,0:21:60.20:0,60,948	0/0:21,0:20:57.18:0,57,882	0/0:29,2:30:31.23:0,31,1077	0/0:19,0:19:57.03:0,57,797	0/1:11,13:24:99:430,0,148	0/1:7,6:15:99:205,0,235	0/1:2,2:4:70.22:71,0,70
chr10	1375092	.	GAAGGAAGGAAGAAAGAAAGAAAGA	G	3499.02	PASS	AB=0.870;AC=9;AF=0.161;AN=56;BaseQRankSum=10.507;DP=518;FS=7.781;HRun=0;HaplotypeScore=298.0991;InbreedingCoeff=0.6084;MQ=49.80;MQ0=12;MQRankSum=-10.350;QD=32.10;ReadPosRankSum=-0.994;VQSLOD=0.7287;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:12,0:12:99:167,0,126	0/0:5,0:5:15.05:0,15,804	0/0:17,0:3:8.96:0,9,97	0/0:20,0:3:9.03:0,9,157	0/0:25,0:25:63.19:0,63,2480	0/0:28,0:28:78.24:0,78,4468	0/0:11,0:11:33.10:0,33,1093	1/1:32,0:21:20.35:434,20,0	0/1:14,0:13:37.92:38,0,568	0/0:23,0:23:60.21:0,60,3665	0/0:27,0:27:75.25:0,75,4066	0/0:12,0:12:27.08:0,27,1411	0/0:15,0:15:42.14:0,42,1788	0/0:23,0:23:57.15:0,57,3133	0/0:13,0:13:21.07:0,21,706	0/0:11,0:11:21.07:0,21,715	0/0:11,0:11:24.01:0,24,446	0/0:14,0:13:12.86:0,13,1260	0/0:17,0:16:42.05:0,42,1661	0/0:34,0:34:93.29:0,93,5182	0/0:13,0:12:33.08:0,33,1728	0/0:22,0:21:57.17:0,57,3764	0/0:22,0:21:54.17:0,54,2975	0/0:26,0:25:62.43:0,62,2917	0/0:20,0:20:60.21:0,60,3416	0/1:12,21:32:1.17:1611,0,1	1/1:15,0:15:42.61:1126,43,0	1/1:3,0:2:6.02:123,6,0
chr10	1375100	.	GAAGA	G	455.97	PASS	AB=0.995;AC=13;AF=0.250;AN=52;BaseQRankSum=4.985;DP=511;FS=8.725;HRun=0;HaplotypeScore=124.9636;InbreedingCoeff=0.2524;MQ=49.36;MQ0=10;MQRankSum=-3.190;QD=2.70;ReadPosRankSum=-1.266;VQSLOD=1.8061;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:11,0:11:8.32:8,0,34	0/0:6,0:6:9.01:0,9,102	./.	./.	1/1:22,0:22:28.24:289,28,0	0/0:29,0:29:60:0,60,842	0/0:11,0:11:17.88:0,18,135	0/0:34,0:28:10.11:0,10,60	0/1:16,0:15:25.87:26,0,72	0/0:20,0:20:30.06:0,30,493	0/0:25,0:25:35.28:0,35,471	0/0:9,0:9:15.03:0,15,224	0/0:17,0:17:24.03:0,24,298	0/0:19,0:19:42.03:0,42,461	1/1:6,8:14:3.01:47,3,0	1/1:6,5:11:3.01:47,3,0	0/0:11,0:11:20.48:0,20,129	0/1:13,0:12:3.55:4,0,95	0/0:16,0:14:1.07:0,1,175	0/0:31,0:31:50.99:0,51,661	0/0:11,0:10:17.87:0,18,226	0/0:23,0:20:17.05:0,17,558	0/0:21,0:21:41.93:0,42,530	0/1:27,1:27:4.55:5,0,485	0/0:21,0:21:39.06:0,39,447	0/1:33,0:31:41.36:78,0,41	0/1:17,0:17:1.62:86,0,2	0/1:4,0:3:12.83:13,0,13
chr10	1375125	.	AAGAAAGAAAGAAAGAAAGAG	A	3166.42	PASS	AB=0.880;AC=6;AF=0.107;AN=56;BaseQRankSum=11.055;DP=504;FS=20.246;HRun=0;HaplotypeScore=257.6960;InbreedingCoeff=0.1523;MQ=50.04;MQ0=13;MQRankSum=-8.454;QD=30.16;ReadPosRankSum=-2.278;VQSLOD=0.7981;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:15,0:15:66.21:66,0,171	0/0:7,0:7:18.05:0,18,624	0/0:8,0:1:3.01:0,3,31	0/0:13,0:1:2.97:0,3,20	0/0:23,0:23:69.12:0,69,2491	0/0:33,0:33:96.30:0,96,4819	0/0:11,0:11:30.08:0,30,905	0/1:13,19:29:99:580,0,414	0/0:15,0:14:4.54:0,5,655	0/0:22,0:22:57.18:0,57,2984	0/0:19,0:19:57.11:0,57,3067	0/0:11,0:11:33.10:0,33,1431	0/0:13,0:13:39.12:0,39,2009	0/0:21,0:21:60.16:0,60,2758	0/0:11,0:11:12.04:0,12,424	0/0:11,0:11:20.99:0,21,599	0/0:13,0:13:30.06:0,30,595	0/0:6,0:5:15.05:0,15,778	0/0:17,0:14:39.03:0,39,1581	0/0:36,0:36:99:0,105,4551	0/0:9,0:8:21.07:0,21,1409	0/0:26,0:23:61.75:0,62,3236	0/0:25,0:25:72.19:0,72,3494	0/0:26,0:25:60.33:0,60,2715	0/0:23,0:23:63.20:0,63,2909	0/1:28,1:26:97.09:1381,0,97	0/1:23,2:24:43:1064,0,43	1/1:4,0:3:8.99:199,9,0
chr10	1375203	.	GAAAGA	G	191.62	PASS	AB=0.904;AC=4;AF=0.071;AN=56;BaseQRankSum=7.666;DP=443;FS=0.000;HRun=0;HaplotypeScore=96.5664;InbreedingCoeff=-0.0188;MQ=52.80;MQ0=14;MQRankSum=-5.405;QD=3.76;ReadPosRankSum=1.357;VQSLOD=1.4998;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:15,0:15:20.51:21,0,268	0/0:12,0:11:32.14:0,32,626	0/0:6,0:1:3.01:0,3,42	0/0:8,0:2:6.02:0,6,86	0/0:21,0:21:49.11:0,49,1172	0/0:29,0:29:75.74:0,76,1732	0/0:12,0:12:24.08:0,24,423	0/0:18,0:10:25.86:0,26,232	0/0:9,0:8:8.20:0,8,106	0/0:22,0:22:66.21:0,66,1450	0/0:25,0:25:72.23:0,72,1786	0/0:16,0:16:48.15:0,48,997	0/0:10,0:10:30.08:0,30,617	0/0:14,0:14:42.14:0,42,1086	0/0:9,0:9:27.08:0,27,706	0/0:11,0:11:33.11:0,33,754	0/0:7,0:7:6.69:0,7,99	0/0:11,0:10:30.10:0,30,733	0/0:19,0:16:48.16:0,48,1021	0/0:30,0:30:87.30:0,87,2222	0/0:7,0:7:18.06:0,18,490	0/0:21,0:21:63.21:0,63,1468	0/0:26,0:26:78.27:0,78,1753	0/0:23,0:23:66.65:0,67,1433	0/0:26,0:25:72.23:0,72,1602	0/1:11,0:11:32.46:32,0,44	0/1:13,6:19:98.33:211,0,98	0/1:5,0:6:6.48:36,0,6
chr10	1375208	.	A	AAAGA	124.87	PASS	AB=1.000;AC=6;AF=0.120;AN=50;BaseQRankSum=3.715;DP=448;FS=0.000;HRun=0;HaplotypeScore=90.8031;InbreedingCoeff=0.1791;MQ=53.94;MQ0=13;MQRankSum=-2.880;QD=2.12;ReadPosRankSum=-2.669;VQSLOD=1.2419;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:14,0:14:11.58:12,0,32	0/1:15,0:14:14.32:138,0,14	./.	./.	0/0:22,0:22:30.02:0,30,359	0/0:26,0:26:28.61:0,29,575	1/1:6,5:12:5.97:73,6,0	./.	0/0:10,0:10:5.95:0,6,42	0/0:22,0:22:30.09:0,30,433	0/0:24,0:24:42.06:0,42,561	0/0:14,0:14:18.06:0,18,281	0/0:10,0:10:12.04:0,12,186	0/0:14,0:14:21.07:0,21,328	0/0:8,0:8:21.05:0,21,280	0/0:10,0:10:18.04:0,18,258	0/0:8,0:8:8.92:0,9,62	0/1:12,0:11:6.76:7,0,167	0/0:20,0:16:18.04:0,18,233	0/0:29,0:29:56.86:0,57,742	0/0:6,0:6:12.04:0,12,185	0/0:20,0:20:33.09:0,33,472	0/0:28,0:28:42.06:0,42,521	0/0:24,0:24:36.03:0,36,448	0/0:25,0:24:41.47:0,41,428	0/0:10,0:10:1.31:0,1,17	0/0:22,0:22:32.31:0,32,243	0/1:6,0:6:2.99:3,0,13
chr10	1375779	.	CT	C	467.66	PASS	AB=0.864;AC=13;AF=0.232;AN=56;BaseQRankSum=4.375;DP=556;FS=0.488;HRun=15;HaplotypeScore=76.7230;InbreedingCoeff=0.2170;MQ=77.97;MQ0=3;MQRankSum=-1.587;QD=2.27;ReadPosRankSum=3.089;VQSLOD=-0.7491;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,16:20:34.47:217,34,0	0/0:12,1:13:4.62:0,5,150	0/0:40,1:22:5.32:0,5,99	0/0:29,0:18:0.40:0,0,102	0/1:26,6:34:24.44:24,0,291	0/1:12,2:15:21.36:21,0,172	0/1:13,3:17:29.31:29,0,146	0/0:19,0:28:34.88:0,35,220	1/1:6,0:18:18.26:53,18,0	0/0:21,0:21:19.71:0,20,290	0/0:22,0:24:38.64:0,39,309	0/1:12,3:15:11.53:12,0,148	0/0:14,0:14:23.96:0,24,200	0/0:11,1:12:7.77:0,8,188	0/0:23,0:24:29.13:0,29,275	0/0:13,0:13:29.94:0,30,250	1/1:7,14:25:36.10:200,36,0	0/0:8,1:10:14.84:0,15,120	0/0:12,1:15:6.65:0,7,188	0/1:23,5:30:46.37:46,0,267	0/0:6,0:7:8.13:0,8,93	0/0:20,0:20:40.69:0,41,326	0/1:14,3:18:21.46:21,0,94	0/1:14,0:14:8.47:8,0,170	0/0:25,0:25:22.74:0,23,317	0/0:15,0:24:35.07:0,35,226	0/0:10,0:22:25.71:0,26,140	0/0:5,0:7:11.68:0,12,81
chr10	1377426	.	AATGAGG	A	818.67	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=10.281;DP=758;FS=2.218;HRun=0;HaplotypeScore=182.2302;InbreedingCoeff=0.7845;MQ=69.90;MQ0=0;MQRankSum=-10.318;QD=9.63;ReadPosRankSum=1.009;VQSLOD=2.7241;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:61,0:61:99:0,132,4133	0/0:17,0:17:45.15:0,45,1454	0/0:31,0:31:47.69:0,48,1034	0/1:17,0:17:15.42:15,0,552	0/0:18,0:18:48.16:0,48,1509	0/0:27,0:27:63.20:0,63,1954	0/0:24,0:24:60.19:0,60,1767	0/0:27,0:27:57.17:0,57,1424	1/1:26,10:36:45.43:564,45,0	0/0:33,0:33:78.26:0,78,2289	0/0:28,0:28:57.18:0,57,1738	0/0:21,0:21:51.18:0,51,1536	0/0:24,0:24:51.17:0,51,1595	0/0:23,0:23:57.18:0,57,1731	0/0:28,0:28:66.23:0,66,2010	0/0:26,0:26:36.21:0,36,1711	1/1:29,3:32:35.46:368,35,0	0/0:15,0:15:39.13:0,39,1237	0/0:23,0:23:57.20:0,57,1708	0/0:25,0:25:60.19:0,60,1824	0/0:37,0:37:99:0,102,3294	0/0:33,0:33:78.25:0,78,2456	0/0:32,0:32:54.18:0,54,1720	0/0:33,0:33:81.21:0,81,2281	0/0:15,0:15:36.12:0,36,1163	0/0:35,0:35:78.27:0,78,2504	0/0:27,0:27:72.25:0,72,2239	0/0:10,0:10:24.08:0,24,796
chr10	1377444	.	G	GGC	1585.08	PASS	AB=0.719;AC=3;AF=0.054;AN=56;BaseQRankSum=9.744;DP=733;FS=2.904;HRun=0;HaplotypeScore=120.1575;InbreedingCoeff=0.5860;MQ=68.36;MQ0=0;MQRankSum=-10.229;QD=29.91;ReadPosRankSum=2.372;VQSLOD=5.1867;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,159,2516	0/0:17,0:17:51.13:0,51,802	0/0:25,0:25:64.58:0,65,893	0/0:16,0:16:9.53:0,10,613	0/0:19,0:19:54.18:0,54,878	0/0:27,0:27:81.26:0,81,1297	0/0:28,0:28:84.27:0,84,1342	0/0:23,0:23:69.20:0,69,1035	1/1:12,18:30:10.55:1192,11,0	0/0:32,0:32:96.32:0,96,1536	0/0:23,0:23:63.20:0,63,1004	0/0:23,0:23:69.22:0,69,1100	0/0:20,0:20:60.20:0,60,978	0/0:24,0:24:72.23:0,72,1150	0/0:27,0:27:81.28:0,81,1315	0/0:22,0:22:66.22:0,66,1056	0/1:14,9:23:99:491,0,143	0/0:18,0:18:54.14:0,54,825	0/0:26,0:26:78.26:0,78,1244	0/0:28,0:28:78.25:0,78,1247	0/0:50,0:50:99:0,144,2322	0/0:35,0:35:99:0,102,1637	0/0:22,0:22:66.23:0,66,1072	0/0:31,0:31:93.30:0,93,1487	0/0:19,0:19:54.14:0,54,806	0/0:33,0:33:93.32:0,93,1516	0/0:29,0:29:87.30:0,87,1416	0/0:9,0:9:27.08:0,27,416
chr10	1377452	.	CTCT	C	365.63	PASS	AB=0.689;AC=2;AF=0.036;AN=56;BaseQRankSum=8.736;DP=728;FS=16.399;HRun=0;HaplotypeScore=135.7697;InbreedingCoeff=-0.0405;MQ=66.32;MQ0=0;MQRankSum=-8.536;QD=7.46;ReadPosRankSum=1.892;VQSLOD=2.2147;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:59,0:59:99:0,178,4318	0/0:19,0:19:57.20:0,57,1400	0/0:18,0:18:45.14:0,45,900	0/0:14,0:14:6.93:0,7,738	0/0:19,0:19:57.20:0,57,1378	0/0:29,0:29:84.27:0,84,1988	0/0:31,0:31:93.32:0,93,2293	0/0:20,0:20:60.20:0,60,1407	0/1:16,12:28:99:237,0,1021	0/0:27,0:27:81.28:0,81,1990	0/0:19,0:19:57.20:0,57,1405	0/0:25,0:25:75.26:0,75,1837	0/0:20,0:20:60.21:0,60,1465	0/0:23,0:23:69.24:0,69,1693	0/0:27,0:27:81.28:0,81,1993	0/0:25,1:26:46.73:0,47,1809	0/1:11,10:21:99:218,0,379	0/0:17,1:18:19.97:0,20,1169	0/0:25,0:25:75.26:0,75,1821	0/0:27,0:27:75.26:0,75,1846	0/0:51,0:51:99:0,151,3661	0/0:37,0:37:99:0,111,2660	0/0:24,0:24:72.25:0,72,1771	0/0:33,0:33:99:0,99,2430	0/0:19,0:19:57.20:0,57,1405	0/0:29,0:29:82.59:0,83,2068	0/0:31,0:31:93.32:0,93,2281	0/0:9,0:9:27.09:0,27,646
chr10	1377456	.	AGC	A	145.94	PASS	AB=0.689;AC=2;AF=0.036;AN=56;BaseQRankSum=8.596;DP=729;FS=14.556;HRun=0;HaplotypeScore=120.9979;InbreedingCoeff=-0.0373;MQ=66.94;MQ0=0;MQRankSum=-8.278;QD=2.98;ReadPosRankSum=1.836;VQSLOD=1.6410;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:58:99:0,175,3427	0/0:19,0:19:57.20:0,57,1157	0/0:15,0:15:23.73:0,24,574	0/0:15,0:15:37.65:0,38,639	0/0:22,0:22:66.23:0,66,1324	0/0:28,0:28:81.28:0,81,1632	0/0:30,0:30:90.30:0,90,1793	0/0:20,0:20:60.19:0,60,1106	0/1:16,12:28:99:109,0,845	0/0:26,0:26:78.26:0,78,1534	0/0:18,0:18:54.19:0,54,1096	0/0:25,0:25:75.24:0,75,1456	0/0:20,0:20:60.21:0,60,1205	0/0:24,0:24:72.23:0,72,1414	0/0:28,0:28:84.27:0,84,1656	0/0:24,1:25:53.77:0,54,1441	0/1:11,10:21:99:126,0,320	0/0:16,1:17:26.44:0,26,938	0/0:26,0:26:78.24:0,78,1506	0/0:29,0:29:81.27:0,81,1576	0/0:52,0:52:99:0,157,3126	0/0:36,0:36:99:0,108,2177	0/0:24,0:24:72.25:0,72,1443	0/0:33,0:33:99:0,99,1975	0/0:22,0:22:66.20:0,66,1259	0/0:30,0:30:85.80:0,86,1751	0/0:31,0:31:93.32:0,93,1877	0/0:7,0:7:21.07:0,21,427
chr10	1377461	.	TC	T	398.39	PASS	AB=0.685;AC=2;AF=0.036;AN=56;BaseQRankSum=8.442;DP=738;FS=19.292;HRun=3;HaplotypeScore=104.1706;InbreedingCoeff=-0.0399;MQ=68.72;MQ0=0;MQRankSum=-8.310;QD=8.30;ReadPosRankSum=2.524;VQSLOD=0.0200;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:60,0:60:99:0,181,2820	0/0:19,0:19:57.19:0,57,906	0/0:12,1:13:8.47:0,8,408	0/0:15,0:15:38.93:0,39,513	0/0:24,0:24:69.22:0,69,1081	0/0:28,0:28:84.29:0,84,1330	0/0:31,0:31:93.30:0,93,1461	0/0:20,0:20:54.17:0,54,839	0/1:15,12:27:99:247,0,580	0/0:27,0:27:81.28:0,81,1290	0/0:19,0:19:57.19:0,57,911	0/0:24,0:24:72.25:0,72,1148	0/0:21,0:21:63.21:0,63,1002	0/0:27,0:27:81.28:0,81,1286	0/0:27,0:27:78.27:0,78,1247	0/0:26,1:27:49.41:0,49,1167	0/1:11,10:21:99:240,0,240	0/0:16,1:17:17.39:0,17,729	0/0:25,0:25:75.26:0,75,1197	0/0:27,0:27:78.27:0,78,1236	0/0:53,0:53:99:0,160,2487	0/0:37,0:37:99:0,111,1738	0/0:24,0:24:69.22:0,69,1076	0/0:33,0:33:99:0,99,1555	0/0:22,0:22:66.21:0,66,1032	0/0:31,0:31:89.16:0,89,1434	0/0:32,0:32:96.33:0,96,1530	0/0:7,0:7:21.07:0,21,336
chr10	1377464	.	GGCCATCAT	G	1540.55	PASS	AB=0.816;AC=4;AF=0.071;AN=56;BaseQRankSum=8.463;DP=748;FS=18.805;HRun=0;HaplotypeScore=209.8497;InbreedingCoeff=-0.0739;MQ=70.62;MQ0=0;MQRankSum=-7.704;QD=17.12;ReadPosRankSum=2.710;VQSLOD=1.2648;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:64,0:64:99:0,190,7656	0/0:18,0:18:51.16:0,51,2123	0/0:11,0:11:3.87:0,4,924	0/0:18,0:18:47.36:0,47,1263	0/0:27,0:27:81.28:0,81,3292	0/0:29,0:29:81.23:0,81,3326	0/0:31,0:31:93.32:0,93,3906	0/0:21,0:21:60.19:0,60,2386	0/1:13,12:25:99:914,0,159	0/0:26,0:26:78.27:0,78,3423	0/0:21,0:21:60.21:0,60,2565	0/0:25,0:25:75.20:0,75,3027	0/0:21,0:21:63.20:0,63,2552	0/0:26,0:26:78.27:0,78,3381	0/0:28,0:28:81.26:0,81,3269	0/1:25,1:26:1.03:1,0,3130	0/1:11,10:21:65.81:699,0,66	0/1:17,1:18:26.39:26,0,2102	0/0:27,0:27:81.25:0,81,3023	0/0:29,0:29:84.29:0,84,3490	0/0:52,0:52:99:0,150,6330	0/0:38,0:38:99:0,114,4709	0/0:23,0:23:69.24:0,69,2846	0/0:32,0:32:96.33:0,96,4046	0/0:22,0:22:63.69:0,64,2743	0/0:30,0:30:84.29:0,84,3486	0/0:32,0:32:96.33:0,96,4203	0/0:7,0:7:21.07:0,21,939
chr10	1377472	.	T	TG	1032.31	PASS	AB=0.922;AC=4;AF=0.071;AN=56;BaseQRankSum=10.425;DP=765;FS=19.809;HRun=1;HaplotypeScore=109.3173;InbreedingCoeff=0.5505;MQ=71.74;MQ0=0;MQRankSum=-8.528;QD=14.34;ReadPosRankSum=-0.141;VQSLOD=1.9215;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:60,0:60:99:0,178,2264	0/0:17,0:17:48.16:0,48,623	0/0:14,0:14:17.33:0,17,311	0/1:17,0:19:10.93:11,0,426	0/0:26,0:26:78.25:0,78,1013	0/0:28,0:28:81.26:0,81,1052	0/0:33,0:33:96.29:0,96,1218	0/0:21,0:21:57.18:0,57,729	1/1:25,1:26:24.24:623,24,0	0/0:28,0:28:84.26:0,84,1067	0/0:20,0:20:57.19:0,57,740	0/0:23,0:23:66.21:0,66,857	0/0:22,0:22:66.19:0,66,841	0/0:26,0:26:78.24:0,78,999	0/0:27,0:27:81.26:0,81,1052	0/0:26,0:26:50.44:0,50,946	0/1:22,5:27:5.44:511,0,5	0/0:19,0:19:24.36:0,24,632	0/0:24,0:24:72.22:0,72,920	0/0:29,0:29:87.28:0,87,1129	0/0:56,0:56:99:0,163,2087	0/0:39,0:39:99:0,114,1464	0/0:25,0:25:75.18:0,75,914	0/0:29,0:29:87.27:0,87,1114	0/0:26,0:26:72.18:0,72,934	0/0:32,0:32:96.10:0,96,1220	0/0:36,0:36:99:0,105,1345	0/0:7,0:7:21.07:0,21,273
chr10	1378191	.	GCAGACTTGGCATTAAT	G	5591.20	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=10.454;DP=608;FS=9.846;HRun=0;HaplotypeScore=257.1322;InbreedingCoeff=0.9832;MQ=70.81;MQ0=0;MQRankSum=-8.785;QD=98.09;ReadPosRankSum=2.271;VQSLOD=2.7975;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,138,9623	0/0:14,0:14:42.14:0,42,3120	0/0:17,0:17:48.16:0,48,2722	0/0:23,0:23:57.20:0,57,3657	0/0:19,0:19:54.19:0,54,3905	0/0:20,0:20:57.20:0,57,4395	0/0:28,0:28:78.27:0,78,5587	1/1:6,10:16:30.10:1267,30,0	0/0:24,0:24:72.25:0,72,5101	0/0:12,0:12:33.11:0,33,2391	0/0:26,0:26:72.25:0,72,5118	0/0:18,0:18:42.13:0,42,2932	0/0:20,0:20:57.20:0,57,4050	0/0:19,0:19:54.19:0,54,4084	0/0:19,0:19:51.17:0,51,3876	0/0:14,0:14:39.13:0,39,3007	0/0:33,0:33:96.33:0,96,6804	0/0:11,0:11:30.10:0,30,2223	0/0:23,0:23:69.24:0,69,4719	0/0:38,0:38:99:0,102,7601	0/0:44,0:44:99:0,117,8829	0/0:22,0:22:57.20:0,57,4189	0/0:24,0:24:60.21:0,60,4456	0/0:20,0:20:54.18:0,54,3518	0/0:14,0:14:39.11:0,39,2548	1/1:3,17:20:48.15:2088,48,0	1/1:3,14:17:38.17:1816,38,0	1/1:1,3:4:9.03:419,9,0
chr10	1379739	.	G	GC	754.51	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-1.638;DP=498;FS=11.301;HRun=7;HaplotypeScore=55.0523;InbreedingCoeff=0.9006;MQ=74.45;MQ0=3;MQRankSum=-1.241;QD=22.19;ReadPosRankSum=0.334;VQSLOD=2.4548;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:80.90:0,81,764	0/0:6,0:6:6.01:0,6,58	0/0:16,0:16:41.93:0,42,390	0/0:10,0:10:7.22:0,7,111	0/0:16,0:16:42.06:0,42,405	0/0:18,0:18:42.07:0,42,406	0/0:23,0:23:63.08:0,63,602	1/1:1,7:8:21.05:235,21,0	0/0:26,0:26:63.07:0,63,602	0/0:12,0:12:30.05:0,30,290	0/0:5,0:4:9.01:0,9,87	0/0:21,0:21:60.08:0,60,574	0/0:11,0:11:30.05:0,30,289	0/0:17,0:17:51.05:0,51,481	0/0:21,0:19:54.09:0,54,521	0/0:16,0:16:35.35:0,35,346	0/0:35,0:35:95.18:0,95,903	0/0:27,0:27:69.10:0,69,666	0/0:18,0:16:42.07:0,42,404	0/0:13,0:13:36.05:0,36,347	0/0:44,0:44:99:0,114,1093	0/0:12,0:12:33.05:0,33,318	0/0:11,0:11:30.05:0,30,289	0/0:34,0:34:96.13:0,96,920	0/0:20,0:20:48.07:0,48,463	1/1:2,5:7:18.04:203,18,0	1/1:2,14:16:33.10:396,33,0	1/1:0,3:3:6.02:72,6,0
chr10	1380233	.	AC	A	1808.04	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.771;DP=648;FS=10.385;HRun=1;HaplotypeScore=66.0457;InbreedingCoeff=0.9687;MQ=84.02;MQ0=0;MQRankSum=-1.283;QD=33.48;ReadPosRankSum=0.216;VQSLOD=2.3051;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,111,1748	0/0:4,0:4:12.04:0,12,192	0/0:23,0:23:60.63:0,61,857	0/0:30,0:30:77.36:0,77,1145	0/0:12,0:12:33.11:0,33,524	0/0:10,0:10:30.10:0,30,479	0/0:33,0:33:96.33:0,96,1527	0/0:20,0:20:60.20:0,60,936	1/1:0,23:23:57.19:797,57,0	0/0:19,0:19:53.02:0,53,861	0/0:15,0:15:45.15:0,45,719	0/0:24,0:24:72.25:0,72,1146	0/0:19,0:19:57.19:0,57,910	0/0:25,0:25:75.26:0,75,1199	0/0:19,0:19:57.19:0,57,909	0/0:20,0:20:57.16:0,57,861	1/1:0,31:31:81.27:1132,81,0	0/0:36,0:36:99:0,105,1652	0/0:25,0:25:75.26:0,75,1197	0/0:24,0:24:72.25:0,72,1151	0/0:64,0:64:99:0,190,2992	0/0:20,0:20:60.18:0,60,913	0/0:19,0:19:54.17:0,54,840	0/0:30,0:30:87.28:0,87,1366	0/0:13,0:13:39.13:0,39,616	0/0:27,0:27:81.28:0,81,1286	0/0:20,0:20:60.20:0,60,951	0/0:4,0:4:12.04:0,12,192
chr10	1383479	.	G	GT	685.93	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-1.708;DP=527;FS=0.000;HRun=7;HaplotypeScore=47.2362;InbreedingCoeff=0.9935;MQ=58.02;MQ0=2;MQRankSum=1.394;QD=27.44;ReadPosRankSum=1.424;VQSLOD=4.0805;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,24:25:66.16:781,66,0	0/0:11,0:11:30.02:0,30,283	0/0:21,0:13:26.99:0,27,249	0/0:12,0:12:27.04:0,27,259	0/0:28,0:28:75.07:0,75,714	0/0:21,0:21:57.08:0,57,550	0/0:15,0:15:36.06:0,36,347	0/0:37,0:35:90.13:0,90,864	0/0:11,0:11:30.05:0,30,290	0/0:36,0:36:93.14:0,93,898	0/0:21,0:21:57.09:0,57,550	0/0:16,0:16:48.01:0,48,452	0/0:9,0:9:27.04:0,27,261	0/0:15,0:15:39.02:0,39,368	0/0:18,0:18:54.07:0,54,515	0/0:11,0:11:27.04:0,27,261	0/0:19,0:19:54.05:0,54,513	0/0:13,0:13:30.05:0,30,290	0/0:16,0:16:36.03:0,36,338	0/0:18,0:18:51.07:0,51,488	0/0:21,0:21:54.08:0,54,521	0/0:21,0:21:57.08:0,57,545	0/0:16,0:16:45.07:0,45,434	0/0:13,0:13:30.05:0,30,290	0/0:20,0:20:57.05:0,57,542	0/0:24,0:24:69.10:0,69,662	0/0:23,0:23:69.09:0,69,659	0/0:15,0:15:39.01:0,39,367
chr10	1386381	.	T	TTGA	6503.60	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-12.170;DP=586;FS=2.442;HRun=0;HaplotypeScore=73.4922;InbreedingCoeff=0.9977;MQ=55.86;MQ0=1;MQRankSum=-5.657;QD=42.51;ReadPosRankSum=3.081;VQSLOD=6.0424;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,19:23:45.15:988,45,0	0/0:11,0:11:30.10:0,30,490	0/0:16,0:14:42.14:0,42,677	0/0:21,0:18:48.16:0,48,754	0/0:30,0:30:84.29:0,84,1364	0/0:29,0:29:87.29:0,87,1393	0/0:11,0:11:30.10:0,30,490	1/1:4,22:23:63.22:1387,63,0	1/1:1,17:19:36.12:804,36,0	0/0:32,0:32:87.30:0,87,1416	0/0:27,0:27:78.26:0,78,1242	0/0:22,0:22:63.21:0,63,1007	0/0:21,0:21:60.20:0,60,980	0/0:25,0:25:69.21:0,69,1074	0/0:21,0:21:57.19:0,57,925	0/0:18,0:18:54.18:0,54,876	1/1:2,11:13:18.06:401,18,0	0/0:20,0:20:53.32:0,53,782	0/0:20,0:19:54.18:0,54,868	0/0:25,0:25:72.24:0,72,1151	0/0:18,0:18:48.16:0,48,772	0/0:11,0:11:24.08:0,24,392	0/0:20,0:20:60.15:0,60,922	0/0:16,0:16:33.11:0,33,536	0/0:19,0:19:57.19:0,57,931	1/1:4,18:21:42.14:927,42,0	1/1:4,26:31:45.14:1004,45,0	1/1:2,17:19:27.22:992,27,0
chr10	1387697	.	GACTC	G	6948.27	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=13.321;DP=707;FS=12.105;HRun=0;HaplotypeScore=119.3075;InbreedingCoeff=0.9982;MQ=74.85;MQ0=2;MQRankSum=-3.703;QD=39.48;ReadPosRankSum=2.891;VQSLOD=4.9737;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,36:44:99:1720,99,0	0/0:22,0:22:63.22:0,63,1549	0/0:29,0:28:75.22:0,75,1699	0/0:16,0:16:25.68:0,26,576	0/0:21,0:21:63.19:0,63,1504	0/0:23,0:23:51.18:0,51,1302	0/0:38,0:38:96.33:0,96,2414	1/1:3,17:19:48.16:838,48,0	1/1:5,25:30:72.25:1262,72,0	0/0:29,0:29:78.26:0,78,1915	0/0:22,0:22:57.18:0,57,1402	0/0:15,0:15:45.15:0,45,1126	0/0:18,0:18:54.19:0,54,1358	0/0:34,0:34:93.32:0,93,2333	0/0:19,0:19:54.19:0,54,1369	0/0:24,0:24:72.25:0,72,1811	1/1:7,21:27:50.77:893,51,0	0/0:23,0:23:57.17:0,57,1379	0/0:33,0:33:78.27:0,78,1971	0/0:25,0:25:63.20:0,63,1525	0/0:50,0:50:99:0,138,3513	0/0:28,0:28:72.23:0,72,1746	0/0:19,0:19:45.11:0,45,966	0/0:29,0:29:81.28:0,81,2037	0/0:14,0:14:36.09:0,36,864	1/1:2,20:21:34.21:973,34,0	1/1:4,20:24:54.18:946,54,0	1/1:0,8:8:18.06:316,18,0
chr10	1388811	.	A	AT	511.01	PASS	AB=0.559;AC=1;AF=0.018;AN=56;BaseQRankSum=6.674;DP=706;FS=13.794;HRun=0;HaplotypeScore=70.4309;InbreedingCoeff=0.0074;MQ=51.16;MQ0=22;MQRankSum=-0.018;QD=15.49;ReadPosRankSum=1.161;VQSLOD=4.4300;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:7,26:31:17.85:585,0,18	0/0:5,0:5:15.05:0,15,210	0/0:48,0:8:12.03:0,12,245	0/0:47,0:9:19.57:0,20,233	0/0:26,0:26:51.17:0,51,712	0/0:28,0:28:54.18:0,54,740	0/0:12,0:12:30.03:0,30,395	0/0:28,0:19:51.14:0,51,692	0/0:23,0:23:51.10:0,51,689	0/0:34,0:33:99:0,99,1370	0/0:25,0:24:53.98:0,54,751	0/0:28,0:28:60.20:0,60,838	0/0:24,0:23:48.14:0,48,671	0/0:22,0:22:51.17:0,51,698	0/0:26,0:26:66.22:0,66,915	0/0:15,0:15:39.13:0,39,545	0/0:37,0:36:69.20:0,69,944	0/0:15,0:15:15.05:0,15,210	0/0:19,0:15:42.11:0,42,566	0/0:29,0:28:78.20:0,78,1051	0/0:17,0:14:27.02:0,27,353	0/0:24,0:24:45.15:0,45,628	0/0:29,0:29:75.20:0,75,1025	0/0:21,0:21:51.17:0,51,712	0/0:21,0:21:57.19:0,57,789	0/0:25,0:23:69.23:0,69,965	0/0:30,0:30:63.21:0,63,880	0/0:14,0:12:21.07:0,21,293
chr10	1388812	.	GAA	G	491.73	PASS	AB=0.567;AC=1;AF=0.018;AN=56;BaseQRankSum=6.979;DP=708;FS=16.997;HRun=3;HaplotypeScore=80.7132;InbreedingCoeff=-0.0199;MQ=51.07;MQ0=23;MQRankSum=0.383;QD=14.46;ReadPosRankSum=1.715;VQSLOD=-0.2891;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:8,26:31:59.43:566,0,59	0/0:5,0:5:15.05:0,15,305	0/0:48,0:8:24.05:0,24,412	0/0:48,0:9:18.03:0,18,326	0/0:26,0:26:51.18:0,51,1035	0/0:29,0:29:54.18:0,54,1040	0/0:12,0:12:30.10:0,30,609	0/0:28,0:19:57.19:0,57,1107	0/0:23,0:23:51.18:0,51,1036	0/0:34,0:33:99:0,99,2010	0/0:25,0:24:54.03:0,54,1048	0/0:28,0:28:60.21:0,60,1218	0/0:24,0:23:48.04:0,48,975	0/0:22,0:22:51.17:0,51,981	0/0:26,0:26:66.23:0,66,1302	0/0:14,0:14:39.13:0,39,792	0/0:35,0:34:66.23:0,66,1327	0/0:16,0:15:14.48:0,14,304	0/0:19,0:15:42.14:0,42,818	0/0:29,0:28:81.17:0,81,1517	0/0:17,0:14:27.09:0,27,548	0/0:24,0:24:45.14:0,45,878	0/0:29,0:29:75.26:0,75,1513	0/0:22,0:22:51.17:0,51,1014	0/0:21,0:21:57.19:0,57,1134	0/0:25,0:23:69.24:0,69,1402	0/0:31,0:31:66.11:0,66,1275	0/0:14,0:12:21.07:0,21,427
chr10	1389998	.	AT	A	1020.09	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=8.955;DP=661;FS=5.830;HRun=3;HaplotypeScore=68.0594;InbreedingCoeff=0.9977;MQ=87.36;MQ0=0;MQRankSum=-2.931;QD=31.88;ReadPosRankSum=-0.304;VQSLOD=3.4357;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,32:32:90.28:1115,90,0	0/0:11,0:11:33.11:0,33,475	0/0:27,0:27:77.97:0,78,994	0/0:19,0:19:51.14:0,51,709	0/0:29,0:29:87.29:0,87,1251	0/0:29,0:29:87.27:0,87,1218	0/0:17,0:17:51.16:0,51,715	0/0:23,0:23:66.20:0,66,903	0/0:36,0:36:99:0,105,1491	0/0:27,0:27:78.25:0,78,1090	0/0:24,0:24:69.20:0,69,942	0/0:27,0:27:78.26:0,78,1123	0/0:38,0:38:99:0,111,1592	0/0:18,0:18:54.15:0,54,740	0/0:29,0:29:84.27:0,84,1191	0/0:23,0:23:69.21:0,69,974	0/0:18,0:18:54.18:0,54,777	0/0:9,0:9:27.09:0,27,388	0/0:25,0:25:54.17:0,54,745	0/0:26,0:26:69.23:0,69,988	0/0:23,0:23:66.22:0,66,950	0/0:21,0:21:63.19:0,63,873	0/0:14,0:14:42.13:0,42,586	0/0:19,0:19:54.18:0,54,777	0/0:22,0:22:63.16:0,63,848	0/0:34,0:34:99:0,102,1437	0/0:32,0:31:96.30:0,96,1361	0/0:9,0:9:27.09:0,27,388
chr10	1390113	.	AG	A	492.14	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.810;DP=591;FS=3.660;HRun=1;HaplotypeScore=55.1643;InbreedingCoeff=0.9577;MQ=81.57;MQ0=0;MQRankSum=-2.046;QD=28.95;ReadPosRankSum=0.859;VQSLOD=3.3964;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,17:17:42.14:587,42,0	0/0:11,0:11:33.11:0,33,527	0/0:17,0:17:48.61:0,49,726	0/0:16,0:16:10.50:0,10,573	0/0:32,0:32:96.33:0,96,1525	0/0:30,0:30:90.31:0,90,1439	0/0:13,0:13:39.13:0,39,617	0/0:23,0:23:69.22:0,69,1063	0/0:26,0:26:78.27:0,78,1247	0/0:34,0:34:99:0,102,1606	0/0:27,0:27:81.27:0,81,1273	0/0:20,0:20:60.20:0,60,959	0/0:22,0:21:63.20:0,63,983	0/0:16,0:16:48.16:0,48,765	0/0:24,0:24:72.25:0,72,1148	0/0:20,0:20:60.19:0,60,932	0/0:15,0:15:45.15:0,45,719	0/0:12,0:12:36.12:0,36,575	0/0:19,0:19:54.18:0,54,862	0/0:24,0:24:72.23:0,72,1128	0/0:21,0:21:63.20:0,63,977	0/0:30,0:30:90.31:0,90,1436	0/0:24,0:24:69.22:0,69,1079	0/0:16,0:16:48.15:0,48,743	0/0:20,0:20:60.20:0,60,959	0/0:26,0:26:78.27:0,78,1246	0/0:27,0:26:78.25:0,78,1216	0/0:9,0:9:27:0,27,290
chr10	1390309	.	C	CAA	1985.13	PASS	AB=0.917;AC=19;AF=0.339;AN=56;BaseQRankSum=6.025;DP=489;FS=4.309;HRun=15;HaplotypeScore=96.3954;InbreedingCoeff=0.4684;MQ=83.50;MQ0=3;MQRankSum=-4.052;QD=7.85;ReadPosRankSum=-4.483;VQSLOD=0.2582;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:4,0:11:28.42:38,0,28	0/0:7,0:7:2.29:0,2,62	0/0:38,0:22:28.07:0,28,187	0/1:28,1:23:4.56:5,0,73	0/1:22,1:27:0.11:0,0,312	0/0:15,0:17:26.22:0,26,199	0/0:7,0:7:20.95:0,21,166	1/1:20,2:31:56.87:523,57,0	1/1:6,9:19:28.71:257,29,0	0/0:15,0:18:18.80:0,19,210	0/0:24,0:28:37.93:0,38,367	0/1:14,0:14:8.88:9,0,77	0/1:11,0:12:8.62:9,0,56	0/0:11,0:11:14.37:0,14,118	0/1:11,0:11:5.41:5,0,101	0/0:12,0:15:20.15:0,20,178	1/1:4,14:20:23.56:272,24,0	0/0:16,0:17:23:0,23,165	0/1:16,0:16:5.22:5,0,119	0/0:16,0:17:38.48:0,38,296	0/0:5,0:8:2:0,2,62	0/0:12,0:15:11.31:0,11,172	0/0:15,0:16:10.16:0,10,114	0/0:9,0:9:17.63:0,18,142	0/0:10,0:12:17.35:0,17,169	1/1:14,0:21:47.88:461,48,0	1/1:15,0:27:47.80:422,48,0	1/1:7,1:11:19.16:163,19,0
chr10	1390944	.	AGCTG	A	1217.36	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.936;DP=546;FS=2.844;HRun=0;HaplotypeScore=85.0466;InbreedingCoeff=0.8374;MQ=77.00;MQ0=0;MQRankSum=-4.280;QD=39.27;ReadPosRankSum=2.976;VQSLOD=4.0268;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,29:31:69.24:1312,69,0	0/0:6,0:6:15.05:0,15,411	0/0:19,0:19:54.18:0,54,1292	0/0:16,0:16:41.73:0,42,1008	0/0:24,0:24:72.25:0,72,1927	0/0:21,0:21:63.22:0,63,1646	0/0:18,0:18:54.19:0,54,1479	0/0:38,0:38:99:0,114,3031	0/0:17,0:17:51.14:0,51,1280	0/0:25,0:25:69.24:0,69,1881	0/0:17,0:17:42.14:0,42,1138	0/0:9,0:9:27.09:0,27,740	0/0:23,0:23:57.19:0,57,1504	0/0:9,0:9:27.09:0,27,740	0/0:22,0:22:66.23:0,66,1729	0/0:23,0:23:66.23:0,66,1786	0/0:17,0:17:48.16:0,48,1271	0/0:10,0:10:30.10:0,30,822	0/0:20,0:20:60.21:0,60,1617	0/0:26,0:26:75.26:0,75,2055	0/0:21,0:21:63.22:0,63,1642	0/0:15,0:15:42.14:0,42,1150	0/0:24,0:24:72.25:0,72,1928	0/0:15,0:15:42.14:0,42,1149	0/0:27,0:27:81.28:0,81,2208	0/0:25,0:25:72.25:0,72,1918	0/0:27,0:27:78.25:0,78,2075	0/0:1,0:1:3.01:0,3,82
chr10	1391158	.	TAC	T	276.02	PASS	AB=0.947;AC=19;AF=0.365;AN=52;BaseQRankSum=1.174;DP=469;FS=0.000;HRun=0;HaplotypeScore=73.3161;InbreedingCoeff=-0.3888;MQ=67.08;MQ0=10;MQRankSum=0.316;QD=0.92;ReadPosRankSum=1.158;VQSLOD=1.2991;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:17,3:19:11.98:114,12,0	0/0:7,0:7:12.03:0,12,153	./.	./.	0/1:12,0:12:0.09:0,0,20	0/1:13,1:14:14.26:14,0,139	0/1:15,0:15:19.06:19,0,78	0/0:20,0:20:2.49:0,2,6	0/0:12,0:12:9:0,9,85	0/1:22,0:22:11.21:11,0,178	0/1:13,1:13:17.18:17,0,152	0/1:9,1:9:23.18:23,0,79	0/0:14,0:14:9.01:0,9,109	0/0:16,0:15:18.02:0,18,210	0/1:11,0:11:13.09:13,0,119	0/1:9,0:10:7.81:8,0,39	0/1:13,4:17:51.11:52,0,51	0/1:17,1:19:22.01:22,0,170	0/1:14,1:15:12.38:26,0,12	0/1:16,0:16:13.45:13,0,201	0/1:24,1:24:11.18:11,0,170	0/1:18,0:19:18.78:19,0,231	0/1:20,1:21:34.77:35,0,221	0/1:20,1:22:11.57:12,0,243	0/1:16,1:17:14.37:14,0,133	0/0:14,0:14:10.20:0,10,148	0/0:14,0:15:17.98:0,18,163	0/0:9,0:9:9.01:0,9,88
chr10	1391206	.	C	CAT	1752.50	PASS	AB=0.841;AC=13;AF=0.232;AN=56;BaseQRankSum=-1.728;DP=630;FS=5.347;HRun=0;HaplotypeScore=93.6236;InbreedingCoeff=0.7704;MQ=61.99;MQ0=15;MQRankSum=0.848;QD=10.75;ReadPosRankSum=-0.939;VQSLOD=2.9565;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:26:25.97:279,26,0	0/0:8,0:8:20.91:0,21,213	0/0:33,0:17:41.18:0,41,306	0/0:51,0:32:65.95:0,66,572	0/0:16,0:16:26.34:0,26,189	0/1:19,0:19:0.82:1,0,308	0/0:24,0:23:42.53:0,43,345	1/1:24,0:24:64.37:513,64,0	0/1:2,20:23:1.37:55,0,1	0/0:26,0:25:70.91:0,71,526	0/0:15,0:15:15.21:0,15,316	0/0:21,0:21:49.44:0,49,377	0/0:13,0:13:32.41:0,32,268	0/0:18,0:17:43.75:0,44,373	0/0:17,0:17:37.12:0,37,275	0/0:11,0:11:32.74:0,33,264	0/1:27,0:27:2.10:313,0,2	0/0:27,0:27:52.69:0,53,583	0/0:22,0:22:58.82:0,59,420	0/0:22,0:22:42.14:0,42,438	0/0:45,0:43:95.27:0,95,711	0/0:20,0:20:39.81:0,40,383	0/0:23,0:23:44.94:0,45,417	0/0:35,0:34:62.87:0,63,585	0/0:20,0:20:53.56:0,54,459	1/1:1,14:17:24.79:338,25,0	1/1:13,0:13:32.94:331,33,0	1/1:5,4:10:0.22:94,0,0
chr10	1393540	.	G	GAAA	1333.78	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.332;DP=537;FS=3.773;HRun=9;HaplotypeScore=86.4213;InbreedingCoeff=0.9282;MQ=65.41;MQ0=7;MQRankSum=-0.337;QD=32.53;ReadPosRankSum=0.805;VQSLOD=2.9459;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:12,23:41:82:1429,82,0	0/0:11,0:11:24.03:0,24,303	0/0:18,0:10:8.77:0,9,98	0/0:12,0:8:23.91:0,24,263	0/0:27,0:27:62.90:0,63,782	0/0:11,0:11:24.04:0,24,303	0/0:19,0:19:45.12:0,45,569	0/0:32,0:32:72.18:0,72,910	0/0:14,0:15:32.99:0,33,383	0/0:23,0:23:60.18:0,60,758	0/0:25,0:25:69.21:0,69,872	0/0:17,0:17:36.08:0,36,455	0/0:12,0:12:33.10:0,33,417	0/0:17,0:18:51.08:0,51,624	0/0:17,0:17:42.08:0,42,517	0/0:15,0:15:39.12:0,39,493	0/0:21,0:21:60.16:0,60,742	0/0:15,0:15:39.11:0,39,479	0/0:22,0:22:57.16:0,57,717	0/0:17,0:17:51.15:0,51,630	0/0:19,0:19:48.13:0,48,607	0/0:13,0:13:36.11:0,36,455	0/0:22,0:22:57.15:0,57,720	0/0:21,0:21:51.11:0,51,618	0/0:14,0:14:27.04:0,27,341	0/0:27,0:28:72.15:0,72,890	0/0:25,0:25:57.14:0,57,720	0/0:6,0:6:18.06:0,18,227
chr10	1394145	.	CA	C	959.60	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.367;DP=466;FS=3.862;HRun=2;HaplotypeScore=46.8804;InbreedingCoeff=0.9833;MQ=91.95;MQ0=0;MQRankSum=-2.896;QD=33.09;ReadPosRankSum=3.287;VQSLOD=3.4098;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:45.07:0,45,621	0/0:5,0:5:15.05:0,15,224	0/0:20,0:20:57.14:0,57,802	0/0:20,0:20:51.06:0,51,639	0/0:20,0:20:57.19:0,57,852	0/0:19,0:19:54.17:0,54,787	0/0:9,0:9:27.09:0,27,404	0/0:23,0:23:66.22:0,66,966	1/1:1,8:9:24.07:302,24,0	0/0:17,0:17:51.17:0,51,765	0/0:13,0:13:36.12:0,36,540	0/0:13,0:13:39.13:0,39,585	0/0:21,0:21:63.20:0,63,923	0/0:6,0:6:18.06:0,18,270	0/0:20,0:20:60.20:0,60,899	0/0:10,0:10:30.10:0,30,450	1/1:0,20:20:60.20:779,60,0	0/0:16,0:16:45.15:0,45,660	0/0:21,0:21:63.21:0,63,928	0/0:21,0:21:60.20:0,60,882	0/0:30,0:30:90.30:0,90,1349	0/0:15,0:15:45.14:0,45,654	0/0:10,0:10:30.10:0,30,450	0/0:16,0:16:30.14:0,30,655	0/0:20,0:20:54.17:0,54,790	0/0:32,0:32:96.33:0,96,1439	0/0:17,0:16:51.17:0,51,751	0/0:7,0:7:21.07:0,21,315
chr10	1395283	.	GAGTATTTTAT	G	1117.62	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.953;DP=505;FS=1.071;HRun=0;HaplotypeScore=142.2712;InbreedingCoeff=0.9648;MQ=75.50;MQ0=0;MQRankSum=-6.066;QD=55.88;ReadPosRankSum=0.096;VQSLOD=3.5343;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:45.15:0,45,2108	0/0:10,0:10:27.09:0,27,1418	0/0:15,0:15:42.14:0,42,1912	0/0:5,0:5:12.04:0,12,579	0/0:25,0:25:75.24:0,75,3762	0/0:29,0:29:81.28:0,81,3991	0/0:10,0:10:30.10:0,30,1493	0/0:26,0:26:78.27:0,78,3639	1/1:1,13:14:27.09:868,27,0	0/0:27,0:27:81.28:0,81,4038	0/0:40,0:40:99:0,117,5808	0/0:15,0:15:39.13:0,39,1903	0/0:22,0:22:66.23:0,66,3377	0/0:13,0:13:36.12:0,36,1881	0/0:23,0:23:66.23:0,66,3171	0/0:10,0:10:27.08:0,27,1289	1/1:1,5:6:12.04:366,12,0	0/0:16,0:16:36.12:0,36,1638	0/0:24,0:24:72.25:0,72,3352	0/0:25,0:25:72.23:0,72,3516	0/0:13,0:13:39.13:0,39,1967	0/0:16,0:16:48.16:0,48,2472	0/0:20,0:20:56.98:0,57,2776	0/0:10,0:10:27.09:0,27,1357	0/0:16,0:16:45.15:0,45,2239	0/0:25,0:25:75.26:0,75,3829	0/0:27,0:27:72.25:0,72,3543	0/0:8,0:8:24.08:0,24,1264
chr10	1395499	.	T	TTTGTTGTTG	1928.71	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=7.293;DP=539;FS=5.075;HRun=0;HaplotypeScore=160.4250;InbreedingCoeff=0.8285;MQ=73.67;MQ0=0;MQRankSum=-5.593;QD=38.57;ReadPosRankSum=-0.842;VQSLOD=3.0735;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:9.07:0,9,570	0/0:10,0:10:24.08:0,24,641	0/0:24,0:22:32.84:0,33,751	0/1:15,0:14:1.49:1,0,345	0/0:26,0:26:57.18:0,57,1509	0/0:25,0:25:57.16:0,57,1448	0/0:11,0:11:30.09:0,30,748	0/0:29,0:29:66.21:0,66,1624	1/1:11,7:21:48.16:1568,48,0	0/0:19,0:19:27.08:0,27,654	0/0:23,0:23:51.14:0,51,1250	0/0:11,0:11:24.07:0,24,575	0/0:27,0:27:72.22:0,72,1901	0/0:25,0:25:63.19:0,63,1649	0/0:19,0:20:51.17:0,51,1391	0/0:9,0:9:24.07:0,24,621	1/1:12,2:14:18.04:479,18,0	0/0:16,0:16:19.04:0,19,747	0/0:19,0:19:42.12:0,42,983	0/0:22,0:22:57.19:0,57,1456	0/0:29,0:29:69.22:0,69,1897	0/0:12,0:12:33.10:0,33,791	0/0:24,0:24:57.15:0,57,1370	0/0:18,0:18:35.40:0,35,1234	0/0:21,0:21:48.16:0,48,1267	0/0:25,0:25:48.15:0,48,1198	0/0:16,0:16:33.11:0,33,936	0/0:13,0:13:36.12:0,36,777
chr10	1395550	.	T	TG	1131.56	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=4.374;DP=531;FS=3.642;HRun=2;HaplotypeScore=62.2907;InbreedingCoeff=0.9963;MQ=76.06;MQ0=0;MQRankSum=-5.841;QD=35.36;ReadPosRankSum=-0.297;VQSLOD=3.7979;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:42.14:0,42,544	0/0:8,0:8:24.08:0,24,311	0/0:30,0:30:90.29:0,90,1168	0/0:22,0:20:55.97:0,56,670	0/0:19,0:19:57.19:0,57,738	0/0:22,0:22:60.19:0,60,779	0/0:19,0:19:54.18:0,54,701	0/0:34,0:34:96.30:0,96,1221	1/1:1,18:19:48.16:715,48,0	0/0:19,0:19:57.18:0,57,737	0/0:19,0:19:54.16:0,54,684	0/0:16,0:16:48.14:0,48,609	0/0:33,0:33:99:0,99,1280	0/0:29,0:29:84.27:0,84,1089	0/0:18,0:18:54.18:0,54,701	0/0:8,0:8:24.08:0,24,312	1/1:0,13:13:36.12:539,36,0	0/0:10,0:10:24.08:0,24,311	0/0:21,0:21:60.18:0,60,764	0/0:19,0:19:57.18:0,57,735	0/0:22,0:22:60.19:0,60,779	0/0:12,0:12:33.11:0,33,423	0/0:18,0:18:51.17:0,51,659	0/0:13,0:13:36.12:0,36,467	0/0:18,0:18:54.18:0,54,700	0/0:26,0:26:78.25:0,78,998	0/0:18,0:18:54.18:0,54,701	0/0:10,0:10:30.10:0,30,389
chr10	1396054	.	TAAAC	T	1053.67	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.556;DP=536;FS=7.890;HRun=0;HaplotypeScore=98.8211;InbreedingCoeff=0.9870;MQ=80.12;MQ0=0;MQRankSum=-7.897;QD=35.12;ReadPosRankSum=3.138;VQSLOD=3.5862;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,102,2789	0/0:9,0:9:27.09:0,27,782	0/0:17,0:17:51.13:0,51,1322	0/0:12,0:12:35.53:0,36,710	0/0:27,0:27:81.25:0,81,2184	0/0:26,0:26:78.25:0,78,2056	0/0:14,0:14:42.14:0,42,1095	0/0:26,0:26:78.27:0,78,2140	1/1:3,18:21:60.18:884,60,0	0/0:28,0:28:84.29:0,84,2361	0/0:30,0:30:90.28:0,90,2366	0/0:15,0:15:45.14:0,45,1198	0/0:14,0:14:42.14:0,42,1215	0/0:18,0:18:54.19:0,54,1391	0/0:19,0:19:57.19:0,57,1573	0/0:12,0:12:36.12:0,36,1021	1/1:1,8:9:18.06:290,18,0	0/0:5,0:5:15.05:0,15,411	0/0:19,0:19:57.20:0,57,1546	0/0:30,0:30:90.31:0,90,2554	0/0:18,0:18:54.19:0,54,1518	0/0:18,0:18:54.16:0,54,1405	0/0:22,0:22:66.21:0,66,1816	0/0:13,0:13:39.13:0,39,1130	0/0:20,0:20:60.19:0,60,1651	0/0:22,0:22:66.22:0,66,1801	0/0:23,0:23:69.23:0,69,1846	0/0:15,0:15:45.15:0,45,1303
chr10	1396060	.	ATTCATTTACTCG	A	2203.08	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.594;DP=531;FS=5.179;HRun=0;HaplotypeScore=184.8576;InbreedingCoeff=0.9649;MQ=83.69;MQ0=0;MQRankSum=-7.186;QD=81.60;ReadPosRankSum=3.033;VQSLOD=3.2377;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:96.31:0,96,5462	0/0:9,0:9:27.09:0,27,1415	0/0:20,0:20:51.17:0,51,2544	0/0:13,0:13:13.71:0,14,1147	0/0:27,0:27:81.28:0,81,4594	0/0:23,0:23:69.22:0,69,3897	0/0:13,0:13:36.12:0,36,2102	0/0:28,0:28:78.26:0,78,3618	1/1:0,19:19:57.20:1838,57,0	0/0:28,0:28:84.28:0,84,4715	0/0:26,0:26:75.26:0,75,4164	0/0:16,0:16:45.15:0,45,2623	0/0:15,0:15:45.15:0,45,2771	0/0:22,0:22:66.23:0,66,3887	0/0:17,0:17:51.18:0,51,2695	0/0:14,0:14:39.13:0,39,2412	1/1:0,8:8:15.05:483,15,0	0/0:4,0:4:12.04:0,12,677	0/0:19,0:19:54.15:0,54,2389	0/0:30,0:30:87.30:0,87,5172	0/0:18,0:18:54.19:0,54,2962	0/0:16,0:16:48.16:0,48,2416	0/0:22,0:22:66.21:0,66,3691	0/0:13,0:13:39.12:0,39,1834	0/0:19,0:19:57.18:0,57,3162	0/0:23,0:23:69.22:0,69,3827	0/0:21,0:21:63.22:0,63,3748	0/0:15,0:15:45.15:0,45,2655
chr10	1396478	.	CTG	C	1945.16	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.704;DP=710;FS=10.532;HRun=0;HaplotypeScore=81.3566;InbreedingCoeff=0.9996;MQ=74.09;MQ0=0;MQRankSum=-0.113;QD=34.74;ReadPosRankSum=1.695;VQSLOD=5.5093;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:99:0,99,1890	0/0:12,0:12:36.12:0,36,694	0/0:21,0:21:45.21:0,45,1005	0/0:18,0:18:48:0,48,884	0/0:34,0:34:99:0,99,1876	0/0:24,0:24:72.25:0,72,1390	0/0:13,0:13:39.13:0,39,747	0/0:43,0:43:99:0,126,2419	1/1:0,31:31:78.26:1194,78,0	0/0:34,0:34:99:0,102,1898	0/0:21,0:21:60.19:0,60,1122	0/0:22,0:22:63.22:0,63,1217	0/0:25,0:25:75.26:0,75,1439	0/0:27,0:27:78.27:0,78,1505	0/0:24,0:24:72.23:0,72,1348	0/0:24,0:24:69.24:0,69,1333	1/1:0,25:25:57.19:873,57,0	0/0:12,0:12:36.10:0,36,660	0/0:21,0:21:63.22:0,63,1217	0/0:35,0:35:99:0,105,1991	0/0:53,0:53:99:0,160,3037	0/0:24,0:24:72.25:0,72,1388	0/0:29,0:29:75.26:0,75,1446	0/0:23,0:23:69.24:0,69,1326	0/0:18,0:18:54.19:0,54,1041	0/0:30,0:30:90.31:0,90,1735	0/0:23,0:23:69.24:0,69,1318	0/0:11,0:11:30.06:0,30,529
chr10	1402488	.	C	CT	10926.67	PASS	AB=0.714;AC=53;AF=0.946;AN=56;BaseQRankSum=-2.410;DP=278;FS=0.000;HRun=1;HaplotypeScore=62.0847;InbreedingCoeff=0.3767;MQ=40.76;MQ0=2;MQRankSum=-2.440;QD=39.73;ReadPosRankSum=1.406;VQSLOD=5.3985;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,7:7:15.05:229,15,0	1/1:0,4:4:12.04:184,12,0	0/0:0,1:1:2.94:0,3,18	0/1:3,1:3:10.44:14,0,10	1/1:0,14:14:39.05:544,39,0	1/1:0,19:19:54.12:793,54,0	1/1:0,3:3:9.03:137,9,0	1/1:0,16:13:39.13:566,39,0	1/1:0,13:13:39.13:590,39,0	1/1:0,14:13:39.13:565,39,0	1/1:0,18:18:51.17:783,51,0	1/1:0,6:6:15.05:229,15,0	1/1:0,8:8:21.07:320,21,0	1/1:0,10:10:27.09:401,27,0	1/1:0,15:15:36.12:546,36,0	1/1:0,6:6:18.06:272,18,0	1/1:0,6:6:15:199,15,0	1/1:0,4:5:8.94:109,9,0	1/1:0,4:4:12.02:158,12,0	1/1:0,15:15:36.12:548,36,0	1/1:0,4:4:12.04:182,12,0	1/1:0,20:20:60.20:916,60,0	1/1:0,15:15:39.13:595,39,0	1/1:0,4:4:6.02:91,6,0	1/1:0,13:13:39.13:593,39,0	1/1:0,11:11:33.11:495,33,0	1/1:0,13:13:39.13:594,39,0	1/1:0,7:7:18.06:273,18,0
chr10	1403693	.	AACC	A	3936.56	PASS	AB=0.941;AC=13;AF=0.232;AN=56;BaseQRankSum=12.021;DP=595;FS=3.939;HRun=0;HaplotypeScore=83.5272;InbreedingCoeff=0.9371;MQ=59.96;MQ0=3;MQRankSum=-1.185;QD=33.65;ReadPosRankSum=1.404;VQSLOD=3.9163;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,141,3128	0/0:10,0:10:30.10:0,30,656	0/0:30,0:22:47.17:0,47,1152	0/0:21,0:16:39.11:0,39,791	0/0:21,0:21:63.22:0,63,1363	0/0:17,0:17:45.15:0,45,986	0/0:23,0:23:63.18:0,63,1318	1/1:2,18:17:45.10:682,45,0	1/1:2,11:13:33.11:539,33,0	0/0:28,0:28:81.28:0,81,1787	0/0:14,0:14:36.12:0,36,784	0/0:24,0:24:72.25:0,72,1608	0/0:16,0:16:39.11:0,39,827	0/0:21,0:21:60.18:0,60,1291	0/0:27,0:27:75.25:0,75,1632	0/1:15,1:16:0.86:1,0,916	1/1:3,21:24:48.16:784,48,0	0/0:22,0:22:63.09:0,63,1302	0/0:19,0:18:54.18:0,54,1130	0/0:20,0:20:60.21:0,60,1338	0/0:36,0:36:99:0,102,2247	0/0:22,0:22:63.22:0,63,1406	0/0:24,0:24:72.22:0,72,1512	0/0:17,0:17:42.06:0,42,881	0/0:19,0:19:57.18:0,57,1231	1/1:1,14:15:42.14:686,42,0	1/1:3,22:25:66.18:1049,66,0	1/1:0,4:4:12.04:196,12,0
chr10	1408311	.	G	GC	2898.34	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-6.828;DP=480;FS=13.216;HRun=8;HaplotypeScore=50.8505;InbreedingCoeff=0.9917;MQ=66.69;MQ0=8;MQRankSum=-2.305;QD=20.70;ReadPosRankSum=0.207;VQSLOD=2.4401;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,28:32:75.16:838,75,0	0/0:5,0:5:15.01:0,15,137	0/0:21,0:15:25.51:0,26,260	0/0:18,0:15:34.27:0,34,277	0/0:22,0:22:56.99:0,57,514	0/0:22,0:22:54.01:0,54,488	0/0:17,0:17:42.02:0,42,384	1/1:5,15:19:26.87:267,27,0	1/1:2,14:16:42.12:485,42,0	0/0:16,0:16:36:0,36,329	0/0:18,0:18:47.99:0,48,430	0/0:11,0:11:26.99:0,27,243	0/0:12,0:12:33.02:0,33,302	0/0:17,0:17:45.01:0,45,407	0/0:21,0:21:57.02:0,57,517	0/0:15,0:15:41.96:0,42,375	1/1:4,1:17:35.91:178,36,0	0/0:14,0:13:32.98:0,33,295	0/0:19,0:19:38.86:0,39,403	0/0:23,0:23:45.02:0,45,412	0/0:24,0:23:60.02:0,60,549	0/0:6,0:6:18.01:0,18,165	0/0:11,0:11:32.96:0,33,293	0/0:21,0:21:51.03:0,51,467	0/0:6,0:6:15:0,15,133	1/1:5,14:19:42.12:485,42,0	1/1:2,18:20:45.13:519,45,0	1/1:0,10:11:29.92:326,30,0
chr10	1408600	.	AT	A	2332.23	PASS	AB=0.561;AC=7;AF=0.125;AN=56;BaseQRankSum=10.747;DP=421;FS=0.454;HRun=6;HaplotypeScore=41.8351;InbreedingCoeff=0.8172;MQ=63.61;MQ0=0;MQRankSum=-1.674;QD=25.08;ReadPosRankSum=-3.443;VQSLOD=1.5585;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:57.16:0,57,721	0/0:8,0:8:21.06:0,21,263	0/0:4,0:4:12.04:0,12,149	0/0:4,0:4:9.03:0,9,107	0/0:38,0:38:99:0,102,1328	0/0:10,0:10:30.10:0,30,394	0/0:8,0:8:21.07:0,21,276	1/1:4,31:35:93.22:991,93,0	0/0:12,0:12:33.11:0,33,434	0/0:15,1:16:15.97:0,16,560	0/0:22,0:22:63.20:0,63,816	0/0:8,0:8:24.08:0,24,316	0/0:13,0:13:39.13:0,39,511	0/0:5,0:5:15.05:0,15,194	0/0:14,0:14:36.12:0,36,474	0/0:13,0:13:30.10:0,30,395	0/0:18,0:18:45.10:0,45,572	0/0:22,0:22:66.21:0,66,859	0/0:10,0:10:27.09:0,27,351	0/0:20,0:20:54.17:0,54,706	0/0:7,0:7:21.07:0,21,276	0/0:11,0:11:33.09:0,33,420	0/0:18,0:18:51.17:0,51,668	0/0:7,0:7:21.07:0,21,274	0/0:19,0:19:54.18:0,54,710	0/1:5,18:23:9.47:601,0,9	1/1:0,22:22:60.15:645,60,0	1/1:2,11:13:22.90:244,23,0
chr10	1408646	.	AT	A	1908.75	PASS	AB=0.550;AC=9;AF=0.161;AN=56;BaseQRankSum=9.883;DP=398;FS=1.534;HRun=9;HaplotypeScore=40.0409;InbreedingCoeff=0.8533;MQ=64.77;MQ0=0;MQRankSum=-1.945;QD=19.88;ReadPosRankSum=-1.975;VQSLOD=2.9627;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:57.17:0,57,658	0/0:9,0:9:27.08:0,27,312	0/0:3,0:3:9.02:0,9,99	0/0:4,0:4:12.03:0,12,131	0/0:28,0:28:72.20:0,72,823	0/0:13,0:13:36.09:0,36,406	0/0:9,0:9:27.08:0,27,311	1/1:10,19:29:72.02:655,72,0	1/1:2,15:17:42.02:384,42,0	0/0:17,1:18:23.69:0,24,518	0/0:22,0:22:63.17:0,63,712	0/0:7,0:7:18.05:0,18,208	0/0:14,0:14:42.11:0,42,474	0/0:10,0:10:27.08:0,27,312	0/0:17,0:17:45.13:0,45,519	0/0:12,0:12:24.07:0,24,277	0/0:13,0:13:33.10:0,33,381	0/0:17,0:17:41.99:0,42,466	0/0:10,0:10:24.07:0,24,277	0/0:17,0:17:45.13:0,45,519	0/0:5,0:5:15.04:0,15,173	0/0:8,0:8:21.06:0,21,242	0/0:13,0:13:36.11:0,36,415	0/0:9,0:9:27.08:0,27,312	0/0:24,0:24:69.18:0,69,784	0/1:4,18:22:9.22:430,0,9	1/1:3,14:17:42.02:384,42,0	1/1:3,8:11:24:220,24,0
chr10	1409888	.	TAA	T	460.16	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.661;DP=373;FS=0.000;HRun=15;HaplotypeScore=46.8486;InbreedingCoeff=0.6477;MQ=58.87;MQ0=4;MQRankSum=2.692;QD=13.94;ReadPosRankSum=3.067;VQSLOD=2.2409;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:23:50.81:0,51,564	0/0:8,0:8:24.02:0,24,288	0/0:11,0:4:11.97:0,12,131	0/0:5,0:2:2.80:0,3,13	0/0:18,0:19:47.36:0,47,453	0/0:13,0:13:28.60:0,29,324	0/0:12,0:15:26.51:0,27,285	0/0:17,0:22:38.88:0,39,340	0/0:4,0:5:14.39:0,14,113	0/0:16,0:16:27.02:0,27,317	0/0:20,0:23:54.05:0,54,616	0/0:3,0:3:5.97:0,6,55	0/0:6,0:6:14.96:0,15,162	0/0:10,0:10:16.50:0,16,165	0/0:12,0:12:17.87:0,18,201	0/0:8,0:10:18.04:0,18,216	1/1:8,25:32:62.94:555,63,0	0/0:13,0:15:33.86:0,34,354	0/0:13,0:13:21.02:0,21,235	0/0:10,0:11:24.06:0,24,295	0/0:8,0:8:12.01:0,12,130	0/0:12,0:13:28.36:0,28,310	0/0:14,0:14:23.37:0,23,195	0/0:3,0:4:5.50:0,5,37	0/0:16,0:18:42.05:0,42,505	0/0:14,0:14:36.70:0,37,322	0/0:11,0:11:28.53:0,29,270	0/0:6,0:11:22.28:0,22,231
chr10	1417066	.	G	GT	4201.63	PASS	AB=0.917;AC=13;AF=0.232;AN=56;BaseQRankSum=-8.468;DP=636;FS=1.652;HRun=8;HaplotypeScore=74.5611;InbreedingCoeff=0.8973;MQ=67.25;MQ0=1;MQRankSum=-1.578;QD=24.86;ReadPosRankSum=1.636;VQSLOD=4.4979;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:90.37:0,90,824	0/0:10,0:10:24:0,24,220	0/0:19,0:17:38.93:0,39,340	0/1:10,1:10:16.55:17,0,119	0/0:34,0:34:58.44:0,58,789	0/0:16,0:16:39:0,39,352	0/0:22,0:22:63.03:0,63,577	1/1:5,23:28:66.20:762,66,0	1/1:5,24:29:72.14:802,72,0	0/0:36,0:36:96.04:0,96,873	0/0:29,0:29:84.02:0,84,759	0/0:17,0:17:48.03:0,48,439	0/0:16,0:16:45.02:0,45,412	0/0:24,0:24:66.02:0,66,600	0/0:13,0:13:36.02:0,36,329	0/0:14,0:14:36.02:0,36,330	1/1:5,26:31:75.22:858,75,0	0/0:19,1:20:13.41:0,13,377	0/0:29,0:29:75.04:0,75,686	0/0:29,0:29:81.02:0,81,736	0/0:15,0:15:45.02:0,45,412	0/0:21,0:21:60.03:0,60,549	0/0:25,0:25:69.04:0,69,632	0/0:16,0:16:42.01:0,42,384	0/0:23,0:23:66.03:0,66,604	1/1:6,21:27:38.71:690,39,0	1/1:6,19:25:54.16:623,54,0	1/1:1,17:18:39.12:450,39,0
chr10	1417132	.	GCA	G	612.73	PASS	AB=0.889;AC=5;AF=0.089;AN=56;BaseQRankSum=6.652;DP=704;FS=28.157;HRun=0;HaplotypeScore=113.5780;InbreedingCoeff=-0.1012;MQ=53.41;MQ0=13;MQRankSum=-5.387;QD=4.23;ReadPosRankSum=-2.166;VQSLOD=0.9320;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:48.71:0,49,527	0/0:7,0:7:20.66:0,21,362	0/1:42,6:10:30.51:31,0,184	0/0:41,3:14:9.91:0,10,422	0/0:39,0:39:99:0,114,2011	0/0:18,0:18:50.44:0,50,1000	0/0:32,0:32:72.09:0,72,1677	0/1:16,11:24:99:342,0,573	0/1:23,0:23:87.67:88,0,249	0/0:40,0:39:99:0,117,2294	0/0:22,0:22:66.21:0,66,1244	0/0:22,0:22:63.22:0,63,1228	0/0:14,0:14:42.14:0,42,800	0/0:24,1:25:72.23:0,72,1362	0/0:11,0:11:33.11:0,33,611	0/0:15,0:15:45.15:0,45,880	0/0:32,0:30:39.76:0,40,589	0/0:15,0:15:39.13:0,39,693	0/0:20,0:20:60.13:0,60,1045	0/0:28,0:28:54.62:0,55,1483	0/0:30,0:30:81.11:0,81,1543	0/0:21,0:21:63.22:0,63,1218	0/0:19,0:19:57.01:0,57,977	0/0:28,0:28:84.29:0,84,1654	0/0:28,0:28:81.73:0,82,1503	0/1:20,3:21:99:210,0,522	0/1:23,1:24:60.16:60,0,616	0/0:13,1:14:13.36:0,13,412
chr10	1417134	.	ATG	A	555.43	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=5.159;DP=716;FS=6.833;HRun=0;HaplotypeScore=113.8410;InbreedingCoeff=0.5798;MQ=52.53;MQ0=16;MQRankSum=0.885;QD=14.62;ReadPosRankSum=2.763;VQSLOD=3.4668;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:41:30.60:0,31,177	0/1:7,0:7:17.88:18,0,222	0/0:48,0:9:11.40:0,11,152	0/0:42,0:13:24.08:0,24,356	0/0:38,0:38:81.28:0,81,1274	0/0:20,0:20:51.16:0,51,784	0/0:30,0:30:75.24:0,75,1167	0/0:27,0:24:17.70:0,18,122	0/0:15,0:23:29.67:0,30,205	0/0:40,0:39:99:0,99,1446	0/0:22,0:22:51.17:0,51,807	0/0:23,0:23:54.15:0,54,817	0/0:15,0:15:36.12:0,36,564	0/0:24,0:24:60.20:0,60,953	0/0:11,0:11:21.06:0,21,313	0/0:15,0:15:39.06:0,39,594	1/1:13,18:29:54.16:643,54,0	0/0:16,0:16:24.05:0,24,352	0/0:21,0:20:36.08:0,36,526	0/0:28,0:28:60.19:0,60,936	0/0:29,3:32:45.27:0,45,1170	0/0:22,0:22:51.17:0,51,815	0/0:17,1:19:9.13:0,9,561	0/0:29,0:29:81.25:0,81,1246	0/0:26,1:28:33.25:0,33,1006	0/0:24,0:22:22.13:0,22,231	0/0:24,0:24:10.73:0,11,77	0/0:13,0:14:15.38:0,15,114
chr10	1417946	.	T	TA	303.75	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-4.351;DP=521;FS=0.000;HRun=9;HaplotypeScore=51.5324;InbreedingCoeff=0.7425;MQ=65.91;MQ0=0;MQRankSum=0.129;QD=17.87;ReadPosRankSum=1.891;VQSLOD=3.5153;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:38.99:0,39,339	0/0:11,0:11:29.98:0,30,257	0/0:12,0:10:2.99:0,3,26	0/0:5,0:5:14.74:0,15,116	0/0:30,0:30:80.97:0,81,703	0/0:23,0:23:56.98:0,57,495	0/0:16,0:16:38.98:0,39,339	0/0:30,1:31:56.79:0,57,720	0/0:15,0:15:35.98:0,36,312	0/0:21,0:20:53.98:0,54,467	0/0:27,0:27:65.17:0,65,571	0/0:9,0:9:23.99:0,24,208	0/0:23,0:23:65.99:0,66,573	0/0:6,0:6:15:0,15,130	0/0:16,1:17:5.81:0,6,279	0/0:11,0:11:29.99:0,30,260	1/1:4,13:17:36.10:398,36,0	0/0:20,0:20:44.98:0,45,391	0/0:23,0:23:47.94:0,48,414	0/0:26,0:26:74.98:0,75,651	0/0:5,0:6:14.03:0,14,110	0/0:30,0:30:83.98:0,84,729	0/0:26,0:26:65.97:0,66,573	0/0:16,0:16:42.13:0,42,386	0/0:14,0:14:35.99:0,36,312	0/0:10,0:10:29.99:0,30,260	0/0:39,0:39:99:0,108,921	0/0:23,0:23:62.93:0,63,536
chr10	1419970	.	T	TGG	1185.04	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.540;DP=602;FS=0.000;HRun=0;HaplotypeScore=77.4370;InbreedingCoeff=0.9991;MQ=71.01;MQ0=0;MQRankSum=-0.948;QD=56.43;ReadPosRankSum=-1.629;VQSLOD=3.0239;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,114,1827	0/0:20,0:20:57.19:0,57,929	0/0:26,0:26:66.26:0,66,1169	0/0:27,0:26:63.25:0,63,1137	0/0:32,0:32:90.31:0,90,1459	0/0:16,0:16:48.16:0,48,779	0/0:15,0:15:45.14:0,45,707	0/0:28,0:28:81.28:0,81,1318	0/0:26,0:26:63.20:0,63,1001	0/0:18,0:18:54.18:0,54,867	0/0:16,0:16:42.14:0,42,682	0/0:24,0:24:69.24:0,69,1120	0/0:16,0:16:48.15:0,48,756	0/0:23,0:23:66.23:0,66,1077	0/0:28,0:28:81.28:0,81,1319	0/0:21,0:21:63.22:0,63,1022	1/1:1,20:21:63.22:1280,63,0	0/0:11,0:11:30.08:0,30,463	0/0:15,0:15:39.12:0,39,606	0/0:27,0:27:81.28:0,81,1312	0/0:20,0:20:60.20:0,60,972	0/0:14,0:14:39.13:0,39,632	0/0:16,0:16:42.14:0,42,682	0/0:22,0:22:60.16:0,60,945	0/0:24,0:24:69.24:0,69,1124	0/0:23,0:23:69.24:0,69,1116	0/0:20,0:19:57.19:0,57,929	0/0:13,0:13:36.12:0,36,582
chr10	1420554	.	A	AT	810.84	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-4.037;DP=530;FS=8.569;HRun=6;HaplotypeScore=46.9980;InbreedingCoeff=0.9147;MQ=58.54;MQ0=6;MQRankSum=-0.688;QD=27.96;ReadPosRankSum=2.382;VQSLOD=3.9763;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:54.12:0,54,551	0/0:11,0:11:33.08:0,33,337	0/0:17,0:3:9:0,9,80	0/0:20,0:5:11.69:0,12,99	0/0:21,0:21:60.14:0,60,612	0/0:22,0:22:63.14:0,63,643	0/0:14,0:14:30.05:0,30,299	0/0:23,0:23:57.09:0,57,570	0/0:17,0:17:48.11:0,48,490	0/0:20,0:19:51.07:0,51,520	0/0:21,0:21:57.13:0,57,582	0/0:15,0:15:42.10:0,42,428	0/0:16,0:16:39.09:0,39,398	0/0:15,0:15:45.07:0,45,445	0/0:13,0:13:39.09:0,39,398	0/0:18,0:18:51.12:0,51,520	1/1:2,27:29:72.23:906,72,0	0/0:20,0:20:51.12:0,51,520	0/0:14,0:13:30.07:0,30,306	0/0:34,0:34:99:0,99,1004	0/0:13,0:13:33.06:0,33,329	0/0:15,0:15:39.08:0,39,396	0/0:19,0:19:48.11:0,48,490	0/0:17,0:17:48.11:0,48,490	0/0:19,0:19:54.12:0,54,551	0/0:23,0:23:63.14:0,63,642	0/0:27,0:27:75.13:0,75,750	0/0:16,0:16:48.11:0,48,490
chr10	1420724	.	C	CA	402	PASS	AB=0.949;AC=16;AF=0.286;AN=56;BaseQRankSum=6.147;DP=469;FS=5.985;HRun=12;HaplotypeScore=80.2131;InbreedingCoeff=0.0998;MQ=65.94;MQ0=2;MQRankSum=-0.571;QD=1.98;ReadPosRankSum=-0.954;VQSLOD=-0.7421;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:20:1.20:0,1,77	0/0:6,0:6:2.93:0,3,22	0/1:7,0:5:3.06:3,0,23	0/0:17,0:13:7.85:0,8,44	0/1:17,2:19:17.57:18,0,205	0/1:11,2:13:6.29:6,0,114	0/0:7,0:7:17.87:0,18,131	0/1:20,0:20:17.11:79,0,17	0/0:18,0:18:20.76:0,21,58	0/0:22,0:24:51.75:0,52,360	0/0:30,0:33:66.50:0,67,457	0/0:13,1:14:2.17:0,2,160	0/0:15,3:18:3.62:0,4,189	0/0:15,0:15:26.75:0,27,195	0/1:12,0:12:0.28:0,0,151	0/0:16,0:16:29.55:0,30,209	0/1:19,0:19:10.46:84,0,10	0/1:19,2:21:40.86:41,0,212	0/1:17,3:20:16.61:17,0,221	0/0:27,0:27:59.59:0,60,437	0/0:9,0:9:22.10:0,22,156	0/1:11,1:12:8.33:8,0,109	0/0:20,3:23:9.58:0,10,231	0/1:8,0:9:10.10:10,0,61	0/0:17,0:17:38.75:0,39,284	1/1:21,0:21:22.20:153,22,0	1/1:19,0:19:12.01:83,12,0	1/1:9,0:9:13.59:59,14,0
chr10	1420730	.	AAAAAAAGAAAG	A	803.10	PASS	AB=0.854;AC=2;AF=0.036;AN=56;BaseQRankSum=3.424;DP=471;FS=6.575;HRun=0;HaplotypeScore=160.1510;InbreedingCoeff=-0.0406;MQ=67.66;MQ0=2;MQRankSum=-3.806;QD=21.13;ReadPosRankSum=2.946;VQSLOD=2.4058;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:22:56.31:0,56,1312	0/0:5,0:5:9.02:0,9,338	0/0:11,0:8:20.85:0,21,443	0/0:18,0:13:11.65:0,12,344	0/0:18,0:18:54.18:0,54,2380	0/0:15,0:14:42.12:0,42,1580	0/0:8,0:8:24.08:0,24,1118	0/0:19,0:18:47.03:0,47,1575	0/0:18,0:18:30.57:0,31,452	0/0:24,0:24:72.18:0,72,3030	0/0:34,0:34:99:0,99,4529	0/0:13,0:13:36.06:0,36,1552	0/0:17,0:17:45.06:0,45,1588	0/0:13,0:13:39.12:0,39,1371	0/0:14,0:14:38.54:0,39,1495	0/0:14,0:14:36.11:0,36,1631	0/1:10,7:17:47.60:874,0,48	0/1:21,0:21:14.44:14,0,2337	0/0:20,0:20:56.02:0,56,2180	0/0:25,0:25:75.16:0,75,3564	0/0:11,0:11:33.10:0,33,1317	0/0:12,0:12:30.07:0,30,1063	0/0:21,0:21:51.15:0,51,1594	0/0:11,0:11:27.49:0,27,1068	0/0:19,0:19:48.16:0,48,1906	0/0:21,0:21:63.11:0,63,2246	0/0:19,0:19:35.99:0,36,1380	0/0:9,0:9:15.05:0,15,688
chr10	1420732	.	AAAAAG	A	778.08	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=3.859;DP=474;FS=2.966;HRun=0;HaplotypeScore=105.6109;InbreedingCoeff=0.3473;MQ=67.57;MQ0=2;MQRankSum=-3.985;QD=10.66;ReadPosRankSum=1.874;VQSLOD=2.7497;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:21:23.83:0,24,404	0/0:4,0:4:9.02:0,9,182	0/0:11,0:8:21.53:0,22,187	0/1:19,0:13:8.23:8,0,163	0/0:18,0:18:54.15:0,54,1192	0/0:16,0:15:39.10:0,39,772	0/0:8,0:8:24.08:0,24,578	0/1:19,0:18:23.93:24,0,623	1/1:3,15:18:33.11:607,33,0	0/0:24,0:24:49.02:0,49,1465	0/0:33,0:33:96.28:0,96,2223	0/0:13,0:13:15.94:0,16,777	0/0:18,0:18:41.67:0,42,858	0/0:13,0:13:36.09:0,36,704	0/0:15,0:15:21.38:0,21,768	0/0:13,0:13:36.11:0,36,847	0/1:17,0:17:8.49:259,0,8	0/0:22,0:22:26.28:0,26,1151	0/0:21,0:21:59.76:0,60,1035	0/0:26,0:26:72.22:0,72,1840	0/0:12,0:12:36.09:0,36,714	0/0:12,0:12:27.07:0,27,542	0/0:20,0:20:41.71:0,42,788	0/0:11,0:11:5.59:0,6,472	0/0:19,0:19:48.11:0,48,971	0/0:22,0:22:16.73:0,17,1003	0/0:19,0:19:13.03:0,13,539	0/0:9,0:9:15.05:0,15,310
chr10	1420733	.	A	AAAG	2340.90	PASS	AB=0.854;AC=10;AF=0.179;AN=56;BaseQRankSum=-5.006;DP=478;FS=7.082;HRun=0;HaplotypeScore=86.3004;InbreedingCoeff=0.7102;MQ=67.51;MQ0=2;MQRankSum=0.357;QD=21.48;ReadPosRankSum=-0.161;VQSLOD=2.9877;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:21:42.94:0,43,397	0/0:4,0:4:9.01:0,9,98	0/0:11,0:8:22.92:0,23,166	0/1:20,0:14:26.54:27,0,70	0/0:19,0:19:53.57:0,54,600	0/0:16,0:15:38.79:0,39,394	0/0:9,0:9:24.06:0,24,311	1/1:2,16:18:17.71:642,18,0	0/0:17,0:17:14.88:0,15,164	0/0:24,0:24:25.77:0,26,774	0/0:33,0:33:72.45:0,72,1098	0/0:13,0:13:15.66:0,16,386	0/0:18,0:18:41.65:0,42,497	0/0:14,0:14:15.96:0,16,375	0/0:15,0:15:20.91:0,21,411	0/0:13,0:13:36.08:0,36,448	0/1:10,0:17:9.13:9,0,149	0/0:22,0:22:17.73:0,18,568	0/0:21,0:21:59.44:0,59,611	0/0:26,0:26:72.17:0,72,974	0/0:12,0:12:34.87:0,35,382	0/0:11,0:11:26.73:0,27,305	0/0:19,0:19:41.66:0,42,482	0/0:11,0:11:4.20:0,4,230	0/0:19,0:19:48.08:0,48,569	1/1:1,20:23:66.09:1002,66,0	1/1:2,16:18:32.99:583,33,0	1/1:0,7:12:15.04:243,15,0
chr10	1420812	.	T	TA	803.77	PASS	AC=2;AF=0.037;AN=54;BaseQRankSum=7.117;DP=535;FS=7.748;HRun=1;HaplotypeScore=58.0771;InbreedingCoeff=0.9019;MQ=54.77;MQ0=24;MQRankSum=-1.698;QD=36.53;ReadPosRankSum=1.149;VQSLOD=3.6202;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:66.21:0,66,856	0/0:8,0:8:24.08:0,24,312	./.	0/0:20,0:3:6.02:0,6,78	0/0:18,0:18:54.17:0,54,693	0/0:25,0:24:69.22:0,69,893	0/0:10,0:10:30.10:0,30,390	0/0:32,0:29:72.23:0,72,934	0/0:21,0:21:54.17:0,54,696	0/0:19,0:19:54.17:0,54,698	0/0:31,0:31:84.26:0,84,1071	0/0:15,0:15:45.15:0,45,584	0/0:18,0:18:51.17:0,51,660	0/0:21,0:21:60.19:0,60,776	0/0:22,0:22:63.19:0,63,804	0/0:13,0:13:39.13:0,39,506	1/1:0,22:22:60.20:898,60,0	0/0:26,0:26:75.24:0,75,964	0/0:24,0:17:48.16:0,48,623	0/0:29,0:29:78.22:0,78,993	0/0:12,0:12:36.12:0,36,467	0/0:14,0:14:42.14:0,42,545	0/0:18,0:18:48.16:0,48,623	0/0:13,0:12:36.12:0,36,467	0/0:15,0:15:41.88:0,42,545	0/0:24,0:24:69.22:0,69,895	0/0:21,0:21:51.15:0,51,648	0/0:12,0:12:27.09:0,27,351
chr10	1426833	.	CA	C	161.46	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.837;DP=573;FS=15.652;HRun=6;HaplotypeScore=81.1800;InbreedingCoeff=0.9803;MQ=82.10;MQ0=4;MQRankSum=-3.488;QD=16.15;ReadPosRankSum=0.223;VQSLOD=2.2056;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,132,1719	0/0:11,0:11:24.06:0,24,288	0/0:43,1:23:21.35:0,21,339	0/0:37,1:24:23.02:0,23,414	0/0:23,0:23:51.08:0,51,665	0/0:25,0:25:69.22:0,69,907	0/0:12,0:12:33.08:0,33,404	0/0:33,0:32:81.25:0,81,1040	0/0:19,0:19:48.14:0,48,615	0/0:19,0:19:54.18:0,54,710	0/0:15,0:15:30.10:0,30,395	0/0:12,0:12:30.10:0,30,394	0/0:16,0:16:45.10:0,45,544	0/0:10,0:10:26.89:0,27,300	0/0:26,0:26:75.24:0,75,974	0/0:14,0:14:39.13:0,39,513	1/1:2,8:10:24.06:255,24,0	0/0:9,0:9:23.29:0,23,283	0/0:16,0:16:39.11:0,39,485	0/0:26,0:26:69.21:0,69,888	0/0:10,0:10:21.07:0,21,276	0/0:18,0:18:51.12:0,51,643	0/0:22,0:22:63.12:0,63,776	0/0:11,0:11:33:0,33,411	0/0:13,0:13:33.11:0,33,432	0/0:14,0:14:36.10:0,36,448	0/0:32,0:32:84.19:0,84,1090	0/0:26,0:25:54.16:0,54,695
chr10	1426847	.	GA	G	961.97	PASS	AB=0.816;AC=13;AF=0.232;AN=56;BaseQRankSum=6.254;DP=582;FS=3.117;HRun=14;HaplotypeScore=80.1480;InbreedingCoeff=0.3034;MQ=81.09;MQ0=5;MQRankSum=-0.327;QD=4.16;ReadPosRankSum=1.557;VQSLOD=1.6095;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:48,1:51:46.80:0,47,809	0/0:10,0:10:21.02:0,21,195	0/0:50,0:24:19.89:0,20,163	0/1:39,0:23:10.35:10,0,53	0/1:18,2:22:38.40:38,0,155	0/1:19,1:25:1.15:1,0,311	0/0:12,0:15:5.55:0,6,207	1/1:11,17:30:7.44:282,7,0	0/0:7,1:15:11.21:0,11,158	0/0:18,2:20:11.07:0,11,228	0/0:14,0:16:26.10:0,26,250	0/0:10,1:11:6.43:0,6,198	0/0:12,0:14:32.83:0,33,284	0/0:9,0:9:24.02:0,24,219	0/0:21,1:22:21.28:0,21,320	0/0:13,0:13:3.59:0,4,175	1/1:2,0:15:24.44:71,24,0	0/0:8,0:9:0.02:0,0,119	0/0:10,0:13:23.65:0,24,183	0/0:22,3:27:3.99:0,4,433	0/1:10,4:14:49.40:49,0,150	0/0:15,2:20:6.34:0,6,294	0/0:19,1:21:21.30:0,21,324	0/1:8,1:10:14.23:14,0,150	0/0:11,0:14:20.70:0,21,168	1/1:3,13:16:38.57:262,39,0	0/1:12,19:32:2.14:255,0,2	0/1:13,14:26:0.88:136,0,1
chr10	1427081	.	C	CCA	833.10	PASS	AB=0.947;AC=3;AF=0.054;AN=56;BaseQRankSum=-3.946;DP=555;FS=0.927;HRun=0;HaplotypeScore=68.0417;InbreedingCoeff=0.6420;MQ=66.40;MQ0=3;MQRankSum=-0.711;QD=20.83;ReadPosRankSum=0.649;VQSLOD=3.6027;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:87.29:0,87,1315	0/0:6,0:6:15.05:0,15,225	0/0:19,0:16:45.15:0,45,665	0/0:15,0:12:36.12:0,36,508	0/0:13,0:13:39.13:0,39,597	0/0:20,0:20:48.16:0,48,730	0/0:31,0:31:90.29:0,90,1347	0/0:26,0:24:72.24:0,72,1092	0/0:20,0:20:47.89:0,48,734	0/0:14,0:14:42.14:0,42,634	0/0:16,0:16:48.15:0,48,710	0/0:20,0:20:42.13:0,42,622	0/0:19,0:19:29.78:0,30,413	0/0:26,0:26:54.10:0,54,786	0/0:14,0:14:30.05:0,30,412	0/0:18,0:18:36.12:0,36,530	1/1:0,22:21:48.16:922,48,0	0/0:23,0:23:54.17:0,54,827	0/0:23,0:22:63.21:0,63,938	0/0:6,0:6:18.06:0,18,270	0/0:46,0:46:99:0,126,1874	0/0:17,0:17:51.17:0,51,759	0/0:10,0:10:27.09:0,27,408	0/1:17,1:18:15.37:15,0,544	0/0:25,0:25:72.24:0,72,1097	0/0:19,0:19:51.15:0,51,742	0/0:27,0:27:63.21:0,63,947	0/0:9,0:9:27.09:0,27,409
chr10	1427932	.	TA	T	526.86	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.338;DP=435;FS=2.028;HRun=2;HaplotypeScore=43.6132;InbreedingCoeff=0.9501;MQ=72.88;MQ0=0;MQRankSum=-1.947;QD=32.93;ReadPosRankSum=0.514;VQSLOD=3.2212;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,105,1494	0/0:4,0:4:12.04:0,12,180	0/0:14,0:14:42.14:0,42,617	0/0:16,1:17:32.18:0,32,580	0/0:15,0:15:39.13:0,39,583	0/0:12,0:12:36.12:0,36,534	0/0:19,0:19:57.19:0,57,852	0/0:20,0:20:54.13:0,54,764	0/0:15,0:15:42.13:0,42,605	0/0:21,0:21:63.20:0,63,906	0/0:16,0:16:48.16:0,48,706	0/0:18,0:18:54.17:0,54,788	0/0:12,0:12:36.12:0,36,533	0/0:14,0:14:42.14:0,42,628	0/0:21,0:21:57.16:0,57,828	0/0:13,0:13:39.13:0,39,584	1/1:0,16:16:48.16:622,48,0	0/0:22,0:22:66.22:0,66,986	0/0:10,0:10:30.10:0,30,449	0/0:12,0:12:36.11:0,36,513	0/0:22,0:22:60.20:0,60,896	0/0:7,0:7:21.07:0,21,315	0/0:11,0:11:33.10:0,33,475	0/0:12,0:12:36.04:0,36,511	0/0:11,0:11:33.11:0,33,492	0/0:14,0:14:42.14:0,42,622	0/0:18,0:18:48.16:0,48,717	0/0:6,0:6:15.05:0,15,225
chr10	1428104	.	C	CAA	852.96	PASS	AB=0.800;AC=11;AF=0.204;AN=54;BaseQRankSum=0.693;DP=320;FS=3.321;HRun=12;HaplotypeScore=56.4927;InbreedingCoeff=0.5916;MQ=49.62;MQ0=31;MQRankSum=-4.727;QD=9.69;ReadPosRankSum=-1.322;VQSLOD=1.1846;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:20:8.51:0,9,66	0/1:3,0:3:3.19:3,0,22	0/0:6,0:1:0:0,0,0	0/0:23,0:6:8.38:0,8,64	0/0:16,0:17:23.27:0,23,254	0/0:5,0:5:5.48:0,5,55	0/0:7,0:5:8.97:0,9,83	1/1:27,8:32:3.55:275,4,0	1/1:8,1:8:10.85:124,11,0	0/0:12,0:10:8.85:0,9,83	0/0:7,0:8:11.69:0,12,139	0/0:9,0:8:11.27:0,11,91	0/0:8,0:7:8.94:0,9,83	0/0:6,0:6:14.98:0,15,138	0/0:15,0:14:23.66:0,24,201	0/0:13,0:13:14.87:0,15,139	./.	0/0:10,0:9:5.43:0,5,54	0/0:17,0:16:9.30:0,9,245	0/0:5,0:3:2.48:0,2,27	0/0:8,0:7:8.96:0,9,83	0/0:4,0:4:2.94:0,3,28	0/0:5,0:5:8.97:0,9,83	0/0:4,0:4:3:0,3,28	0/0:20,0:19:41.69:0,42,388	1/1:8,4:11:12.04:169,12,0	1/1:18,4:20:27.31:341,27,0	1/1:4,2:4:8.31:91,8,0
chr10	1428929	.	TA	T	1809.38	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=10.431;DP=475;FS=3.948;HRun=10;HaplotypeScore=51.9891;InbreedingCoeff=0.9642;MQ=73.59;MQ0=0;MQRankSum=-1.665;QD=17.40;ReadPosRankSum=-1.021;VQSLOD=3.6687;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,15:15:38.99:338,39,0	0/0:7,0:7:21.06:0,21,232	0/0:17,0:14:23.05:0,23,255	0/0:9,0:8:10.54:0,11,90	0/0:28,0:28:72.16:0,72,779	0/0:17,0:17:45.11:0,45,489	0/0:14,0:14:42.08:0,42,447	1/1:5,20:25:59.47:516,59,0	0/0:12,1:14:10.04:0,10,337	0/0:20,1:22:36.97:0,37,602	0/0:18,0:18:54.15:0,54,597	0/0:15,0:15:36.08:0,36,389	0/0:14,0:14:36.08:0,36,388	0/0:15,0:15:33.09:0,33,364	0/0:24,0:24:66.12:0,66,708	0/0:14,0:14:39.11:0,39,431	1/1:2,0:9:10.18:30,10,0	0/0:16,0:16:42.09:0,42,453	0/0:25,0:25:72.16:0,72,773	0/0:23,2:25:40.11:0,40,661	0/0:6,0:6:18:0,18,185	0/0:19,0:19:33.25:0,33,474	0/0:17,0:18:53.87:0,54,539	0/0:10,0:10:18.05:0,18,199	0/0:22,2:24:17.08:0,17,645	1/1:3,16:19:17.79:380,18,0	1/1:6,17:23:47.96:417,48,0	1/1:1,12:13:35.98:312,36,0
chr10	1429511	.	AAACTCGGCC	A	2120.60	PASS	AB=0.667;AC=3;AF=0.054;AN=56;BaseQRankSum=7.562;DP=600;FS=3.644;HRun=0;HaplotypeScore=171.3585;InbreedingCoeff=0.6398;MQ=63.53;MQ0=1;MQRankSum=-8.418;QD=34.76;ReadPosRankSum=-0.459;VQSLOD=2.9247;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:20,20:40:99:1410,0,481	0/0:6,0:6:15.05:0,15,679	0/0:19,0:15:39.08:0,39,1033	0/0:18,0:18:37.01:0,37,1262	0/0:20,0:20:60.20:0,60,2677	0/0:20,0:20:48.16:0,48,2284	0/0:18,0:17:39.13:0,39,1813	0/0:40,0:29:69.23:0,69,2896	0/0:16,0:16:42.14:0,42,1835	0/0:22,0:22:57.20:0,57,2649	0/0:12,0:12:33.11:0,33,1577	0/0:20,0:20:54.19:0,54,2291	0/0:22,0:22:66.23:0,66,3060	0/0:19,0:19:48.16:0,48,2306	0/0:23,0:23:57.15:0,57,2506	0/0:22,0:22:66.23:0,66,3003	1/1:5,16:20:30.06:816,30,0	0/0:14,0:14:42.14:0,42,2011	0/0:30,0:26:66.23:0,66,2788	0/0:19,0:19:57.17:0,57,2417	0/0:21,0:21:51.18:0,51,2239	0/0:25,0:25:69.22:0,69,2957	0/0:19,0:19:54.19:0,54,2390	0/0:20,0:20:51.18:0,51,2410	0/0:21,0:21:57.20:0,57,2574	0/0:28,0:28:72.25:0,72,3332	0/0:28,0:28:75.26:0,75,3535	0/0:17,0:17:51.18:0,51,2347
chr10	1430456	.	A	AG	6135.19	PASS	AB=0.938;AC=15;AF=0.268;AN=56;BaseQRankSum=-11.215;DP=631;FS=5.575;HRun=1;HaplotypeScore=63.5578;InbreedingCoeff=0.9389;MQ=79.89;MQ0=2;MQRankSum=-1.830;QD=35.88;ReadPosRankSum=1.744;VQSLOD=5.2021;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,31:33:84.28:1258,84,0	0/1:14,1:15:2.71:3,0,464	0/0:18,0:16:46.54:0,47,556	0/0:25,0:25:38.43:0,38,817	0/0:26,0:26:66.14:0,66,821	0/0:21,0:21:57.18:0,57,740	0/0:23,0:23:66.20:0,66,842	1/1:1,14:13:30.07:409,30,0	1/1:0,22:22:54.18:809,54,0	0/0:28,0:28:84.25:0,84,1054	0/0:20,0:20:51.17:0,51,660	0/0:25,0:25:75.23:0,75,961	0/0:27,0:27:78.25:0,78,1012	0/0:23,0:23:66.21:0,66,857	0/0:29,0:29:87.27:0,87,1116	0/0:24,0:23:72.21:0,72,918	1/1:0,17:17:51.17:764,51,0	0/0:20,0:20:57.19:0,57,740	0/0:26,0:26:75.24:0,75,972	0/0:20,0:20:60.20:0,60,779	0/0:21,0:21:60.17:0,60,763	0/0:18,1:18:48.16:0,48,623	0/0:12,0:12:33.11:0,33,427	0/0:23,0:23:69.17:0,69,862	0/0:29,0:29:81.15:0,81,983	1/1:0,27:26:78.23:1141,78,0	1/1:1,34:35:96.33:1436,96,0	1/1:0,7:7:21.07:315,21,0
chr10	1430611	.	AGACTATGAGGTGCCTCT	A	6518.95	PASS	AB=0.851;AC=11;AF=0.196;AN=56;BaseQRankSum=11.652;DP=688;FS=114.182;HRun=0;HaplotypeScore=318.2220;InbreedingCoeff=-0.2445;MQ=71.69;MQ0=1;MQRankSum=-9.636;QD=22.25;ReadPosRankSum=3.877;VQSLOD=-0.2954;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,2:26:72.25:0,72,5743	0/1:9,3:12:99:425,0,2233	0/1:20,3:23:99:392,0,4253	0/1:28,1:29:69.68:70,0,5211	0/1:31,6:37:99:810,0,7010	0/0:25,0:25:75.24:0,75,5311	0/0:22,0:22:66.21:0,66,4592	0/0:27,0:26:78.27:0,78,5682	0/0:21,0:19:54.17:0,54,4128	0/1:31,4:35:99:509,0,7011	0/1:23,3:26:99:333,0,5064	0/0:21,0:21:63.20:0,63,4682	0/0:25,1:26:75.26:0,75,6269	0/0:21,0:21:63.22:0,63,4665	0/0:23,0:23:69.21:0,69,5002	0/0:23,0:22:66.23:0,66,5088	0/0:23,2:25:69.24:0,69,5457	0/0:31,0:31:93.30:0,93,7140	0/0:21,0:21:63.19:0,63,4262	0/1:22,4:26:99:536,0,4994	0/0:9,1:10:27.09:0,27,2102	0/1:22,9:31:99:1043,0,4824	0/1:22,5:27:99:687,0,4899	0/0:18,0:18:54.19:0,54,4135	0/1:17,8:24:99:1157,0,3821	0/0:24,1:24:66.23:0,66,5530	0/0:30,0:28:84.29:0,84,6088	0/1:17,5:22:99:557,0,3622
chr10	1430847	.	A	ACACACAC	6662.64	PASS	AB=0.897;AC=24;AF=0.429;AN=56;BaseQRankSum=8.866;DP=624;FS=53.732;HRun=0;HaplotypeScore=147.8060;InbreedingCoeff=0.1178;MQ=82.41;MQ0=5;MQRankSum=-11.940;QD=16.49;ReadPosRankSum=4.298;VQSLOD=1.9299;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,10:21:30.10:1150,30,0	0/0:7,0:7:21.07:0,21,587	0/0:33,0:34:83.92:0,84,2420	0/0:27,0:27:51.57:0,52,1402	0/0:25,0:25:69.24:0,69,1917	0/0:22,0:24:66.21:0,66,1740	0/1:26,0:28:30.75:31,0,1826	1/1:1,1:4:12.03:344,12,0	1/1:0,21:12:30.10:1201,30,0	0/0:31,0:31:87.30:0,87,2349	0/0:16,0:16:45.15:0,45,1202	0/1:23,0:26:99:147,0,1629	0/1:17,0:19:54.15:54,0,1240	0/1:21,0:23:44.77:45,0,1602	0/1:31,0:32:12.67:13,0,2353	0/1:21,0:23:41.90:42,0,1624	1/1:0,13:17:36.12:1424,36,0	0/1:26,0:27:25.45:25,0,2001	0/0:19,0:19:57.18:0,57,1526	0/1:24,0:26:38.54:39,0,1717	0/1:38,0:44:99:108,0,2885	0/0:16,0:16:42.14:0,42,1133	0/0:21,0:21:54.19:0,54,1453	0/1:22,0:24:39.08:39,0,1740	0/1:23,0:24:45.80:46,0,1546	0/1:5,8:11:87.74:494,0,88	1/1:0,13:13:24.08:972,24,0	1/1:0,4:4:12.04:489,12,0
chr10	1431225	.	CA	C	5781.92	PASS	AB=0.797;AC=26;AF=0.464;AN=56;BaseQRankSum=22.152;DP=981;FS=33.185;HRun=2;HaplotypeScore=175.9646;InbreedingCoeff=-0.8773;MQ=70.55;MQ0=3;MQRankSum=-17.266;QD=6.31;ReadPosRankSum=-2.332;VQSLOD=-0.4617;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:50,37:87:99:886,0,1839	0/1:9,6:14:99:152,0,362	0/1:25,5:30:99:104,0,979	0/1:23,7:30:99:190,0,811	0/1:30,12:41:99:201,0,1122	0/1:15,11:26:99:349,0,593	0/1:31,6:35:55.42:55,0,1186	0/0:34,3:35:63.39:0,63,1427	0/1:28,11:39:99:274,0,1060	0/1:27,12:38:99:278,0,1041	0/1:16,3:17:29.11:29,0,543	0/0:26,2:28:6.64:0,7,1071	0/1:21,6:27:99:194,0,692	0/1:19,5:24:86.04:86,0,785	0/1:27,8:35:99:172,0,1070	0/1:22,7:27:99:112,0,889	0/1:29,27:56:99:816,0,889	0/1:22,6:28:99:149,0,902	0/1:29,3:32:23.38:23,0,1146	0/1:27,6:32:67.57:68,0,1018	0/1:51,7:58:99:156,0,1945	0/1:24,8:31:99:143,0,987	0/1:27,10:36:99:172,0,1062	0/1:27,22:48:99:561,0,976	0/1:16,6:22:99:167,0,653	0/1:24,12:35:99:322,0,973	0/1:27,5:30:26.24:26,0,1123	0/1:16,6:21:95.19:95,0,659
chr10	1431604	.	CT	C	7454.82	PASS	AB=0.769;AC=28;AF=0.500;AN=56;BaseQRankSum=21.142;DP=1056;FS=9.927;HRun=1;HaplotypeScore=177.8110;InbreedingCoeff=-0.9847;MQ=54.84;MQ0=27;MQRankSum=-14.474;QD=7.06;ReadPosRankSum=-3.873;VQSLOD=-0.0763;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:55,41:88:99:821,0,1587	0/1:9,2:11:50.60:51,0,399	0/1:18,10:6:55.77:150,0,56	0/1:33,10:7:70.46:108,0,70	0/1:19,10:29:99:257,0,783	0/1:20,7:27:99:215,0,784	0/1:19,12:29:99:233,0,563	0/1:29,14:40:99:467,0,1097	0/1:27,10:37:99:245,0,965	0/1:22,10:30:99:287,0,917	0/1:11,6:15:86.29:86,0,433	0/1:26,13:38:99:315,0,1025	0/1:20,10:30:99:334,0,756	0/1:26,15:37:99:286,0,916	0/1:26,17:40:99:161,0,1061	0/1:33,6:39:99:140,0,1376	0/1:31,30:55:99:733,0,495	0/1:25,6:28:99:188,0,630	0/1:20,11:28:99:251,0,824	0/1:25,3:27:5.59:6,0,959	0/1:41,23:61:99:398,0,971	0/1:19,14:33:99:370,0,814	0/1:19,13:30:99:329,0,734	0/1:40,13:52:99:311,0,1131	0/1:23,5:28:86.24:86,0,1000	0/1:31,10:38:99:220,0,1258	0/1:38,12:47:99:238,0,1636	0/1:12,6:17:99:171,0,344
chr10	1431809	.	A	AATC	12602.96	PASS	AB=0.859;AC=26;AF=0.464;AN=56;BaseQRankSum=-3.923;DP=738;FS=6.421;HRun=0;HaplotypeScore=111.2468;InbreedingCoeff=0.1469;MQ=78.70;MQ0=3;MQRankSum=-11.958;QD=24.24;ReadPosRankSum=0.150;VQSLOD=4.5060;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,32:37:90.69:2000,91,0	0/0:17,0:17:51.16:0,51,915	0/1:25,1:25:4.64:5,0,1066	0/1:20,1:21:16.67:17,0,883	0/0:24,3:24:66.23:0,66,1230	0/1:24,3:26:99:148,0,1062	0/1:19,3:21:87.22:87,0,946	1/1:3,28:28:81.26:1871,81,0	1/1:0,16:15:39.13:960,39,0	0/0:26,2:27:7.93:0,8,1348	0/0:21,0:21:63.22:0,63,1174	0/1:14,4:17:99:170,0,679	0/1:15,6:20:99:238,0,770	0/1:15,7:19:99:175,0,615	0/1:26,6:30:99:206,0,1302	0/1:26,6:31:99:205,0,1331	1/1:0,25:26:60.21:1477,60,0	0/0:31,1:32:19.43:0,19,1554	0/1:16,3:18:99:170,0,730	0/0:25,2:27:75.24:0,75,1364	0/1:44,6:51:99:292,0,2300	0/0:21,0:21:63.22:0,63,1162	0/0:29,0:28:78.27:0,78,1454	0/1:28,3:32:58.48:58,0,1423	0/0:14,0:14:42.14:0,42,760	1/1:0,25:25:72.20:1720,72,0	1/1:0,35:34:84.29:2064,84,0	1/1:0,14:13:30.10:739,30,0
chr10	1432980	.	CA	C	2011.10	PASS	AB=0.791;AC=17;AF=0.304;AN=56;BaseQRankSum=16.308;DP=749;FS=18.710;HRun=5;HaplotypeScore=94.8763;InbreedingCoeff=-0.4324;MQ=66.01;MQ0=3;MQRankSum=-12.678;QD=4.07;ReadPosRankSum=-1.417;VQSLOD=-0.6342;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:34,16:50:99:275,0,1175	0/0:18,0:18:48.16:0,48,655	0/1:22,5:27:6.98:7,0,577	0/0:19,5:21:11.08:0,11,495	0/0:25,7:31:13.33:0,13,958	0/1:21,5:26:94.69:95,0,745	0/1:20,11:31:99:188,0,732	0/1:43,17:57:99:172,0,1479	0/0:19,0:19:51.17:0,51,697	0/1:35,11:44:99:152,0,1180	0/1:25,3:28:20.62:21,0,904	0/0:20,2:21:20.20:0,20,649	0/0:19,2:21:26.20:0,26,717	0/0:27,3:30:38.20:0,38,850	0/1:24,7:31:99:120,0,802	0/0:20,4:20:57.14:0,57,743	0/1:16,3:19:44.75:45,0,596	0/0:15,1:15:45.15:0,45,609	0/1:19,11:30:99:222,0,680	0/0:32,1:33:65.33:0,65,1263	0/1:13,5:18:99:119,0,425	0/0:16,0:16:45.14:0,45,599	0/1:15,7:21:99:141,0,536	0/1:14,6:20:99:113,0,500	0/1:12,7:19:99:181,0,435	0/1:18,8:26:99:138,0,576	0/1:19,15:31:99:172,0,510	0/1:6,1:7:12.94:13,0,225
chr10	1434835	.	TCA	T	386.50	PASS	AB=0.879;AC=21;AF=0.438;AN=48;BaseQRankSum=5.822;DP=515;FS=1.990;HRun=0;HaplotypeScore=71.8440;InbreedingCoeff=0.0513;MQ=42.84;MQ0=101;MQRankSum=-2.547;QD=1.60;ReadPosRankSum=0.082;VQSLOD=1.6999;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:28,3:25:8.86:79,9,0	0/1:8,2:9:35.13:55,0,35	./.	./.	0/0:19,0:15:2.57:0,3,44	0/0:16,0:15:2.99:0,3,24	1/1:16,1:11:3.01:32,3,0	./.	0/0:20,0:13:15.05:0,15,213	0/0:30,0:23:11.71:0,12,117	0/1:16,0:17:5.08:5,0,79	0/1:14,3:15:72.38:72,0,196	0/1:11,3:12:17.13:17,0,136	0/0:16,0:13:15.05:0,15,221	0/1:10,2:10:26.11:26,0,38	0/1:8,2:10:52.26:52,0,76	1/1:29,0:25:8.18:37,8,0	0/1:14,0:11:8.13:8,0,38	0/1:11,1:8:18.61:19,0,60	./.	0/0:21,0:19:6.02:0,6,88	0/0:14,0:14:6.02:0,6,82	0/1:9,1:9:26.14:26,0,32	0/0:36,0:30:18.02:0,18,223	0/0:15,0:12:6.02:0,6,88	1/1:10,0:6:2.84:14,3,0	1/1:10,0:12:5.68:28,6,0	1/1:7,0:11:14.20:70,14,0
chr10	1436771	.	TC	T	1628.11	PASS	AB=0.877;AC=10;AF=0.179;AN=56;BaseQRankSum=11.311;DP=557;FS=11.843;HRun=1;HaplotypeScore=72.2690;InbreedingCoeff=0.7265;MQ=58.80;MQ0=7;MQRankSum=-6.436;QD=11.08;ReadPosRankSum=-0.159;VQSLOD=0.3643;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:32,1:24:8.26:8,0,244	0/0:11,0:11:30.10:0,30,466	0/0:19,0:9:21.05:0,21,302	0/0:13,0:4:2.93:0,3,18	0/0:26,0:26:60.20:0,60,940	0/0:12,0:12:33.11:0,33,525	0/0:17,0:17:48.16:0,48,760	1/1:1,14:10:24.05:309,24,0	0/0:23,2:25:12.59:0,13,870	0/0:26,0:26:75.26:0,75,1195	0/0:15,0:15:36.12:0,36,573	0/0:18,0:17:50.84:0,51,755	0/0:13,0:13:36.12:0,36,559	0/0:19,0:18:51.14:0,51,758	0/0:21,0:21:60.20:0,60,951	0/0:17,0:17:47.63:0,48,690	0/1:26,10:36:12.37:12,0,1003	0/0:21,0:21:36.24:0,36,821	0/0:19,0:18:54.18:0,54,835	0/0:23,0:23:60.20:0,60,943	0/0:23,0:23:69.23:0,69,1090	0/0:15,0:15:36.12:0,36,573	0/0:13,0:12:33.11:0,33,502	0/0:13,0:13:36.12:0,36,567	0/0:31,0:31:87.30:0,87,1365	1/1:11,22:26:15.19:717,15,0	1/1:1,20:18:45:541,45,0	1/1:1,8:5:15.05:205,15,0
chr10	1436773	.	AT	A	196.32	PASS	AB=0.594;AC=1;AF=0.018;AN=56;BaseQRankSum=6.624;DP=605;FS=3.900;HRun=11;HaplotypeScore=94.9485;InbreedingCoeff=0.2382;MQ=58.23;MQ0=10;MQRankSum=-6.438;QD=5.17;ReadPosRankSum=-1.219;VQSLOD=1.8653;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:11,26:29:4.73:271,0,5	0/0:11,0:11:27.07:0,27,288	0/0:19,1:10:20.84:0,21,182	0/0:14,0:4:2.99:0,3,31	0/0:24,0:26:47.89:0,48,463	0/0:13,0:13:35.96:0,36,366	0/0:17,0:17:39.07:0,39,400	0/0:22,0:16:15.32:0,15,131	0/0:24,1:25:36.36:0,36,530	0/0:26,0:26:66.12:0,66,668	0/0:15,0:15:33.07:0,33,345	0/0:17,2:18:8.43:0,8,278	0/0:13,0:13:30.08:0,30,320	0/0:18,0:17:42.10:0,42,442	0/0:22,0:22:60.14:0,60,633	0/0:16,1:17:17.58:0,18,391	0/0:41,0:41:51.29:0,51,342	0/0:22,0:22:51.04:0,51,528	0/0:18,1:18:44.92:0,45,443	0/0:26,0:26:54.08:0,54,556	0/0:25,0:25:57.14:0,57,608	0/0:14,0:15:35.95:0,36,360	0/0:13,0:12:30.07:0,30,318	0/0:13,0:13:27.07:0,27,288	0/0:33,0:33:78.19:0,78,826	0/0:40,0:30:26.09:0,26,188	0/0:24,0:24:23.46:0,23,153	0/0:9,0:5:7.21:0,7,21
chr10	1436898	.	C	CT	1237.55	PASS	AB=0.805;AC=6;AF=0.107;AN=56;BaseQRankSum=10.221;DP=685;FS=7.562;HRun=2;HaplotypeScore=69.4153;InbreedingCoeff=-0.1206;MQ=58.85;MQ0=5;MQRankSum=-11.298;QD=5.52;ReadPosRankSum=0.092;VQSLOD=0.2163;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:50,14:63:99:137,0,1499	0/0:11,0:11:30.05:0,30,354	0/0:26,0:13:36.08:0,36,408	0/0:22,0:10:29.62:0,30,293	0/0:33,0:32:84.25:0,84,1024	0/0:10,0:10:24.08:0,24,297	0/0:22,0:22:63.20:0,63,780	0/1:34,4:38:99:110,0,934	0/1:29,10:39:99:282,0,835	0/0:21,0:21:54.15:0,54,648	0/0:10,0:10:21.07:0,21,260	0/0:26,0:25:69.20:0,69,831	0/0:21,0:21:63.16:0,63,755	0/0:23,0:23:66.19:0,66,804	0/0:23,0:23:69.22:0,69,855	0/0:21,0:21:51.16:0,51,632	0/0:36,4:40:19.28:0,19,1125	0/0:14,0:14:42.13:0,42,520	0/0:13,0:13:39.12:0,39,483	0/0:20,0:19:45.14:0,45,557	0/0:26,0:26:71.96:0,72,867	0/0:20,0:20:54.17:0,54,668	0/0:16,0:16:48.15:0,48,594	0/0:20,0:20:57.13:0,57,678	0/0:23,0:23:63.20:0,63,780	0/1:21,15:36:99:420,0,633	0/1:20,10:30:99:344,0,605	0/1:14,3:17:70.37:70,0,456
chr10	1437352	.	CTGTGGATCA	C	279.51	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=3.187;DP=635;FS=5.239;HRun=0;HaplotypeScore=67.0665;InbreedingCoeff=0.5577;MQ=37.52;MQ0=215;MQRankSum=-2.443;QD=8.73;ReadPosRankSum=1.484;VQSLOD=0.9814;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:10,12:10:9.03:284,9,0	0/0:9,0:9:18.06:0,18,784	0/0:30,0:2:6.02:0,6,194	0/0:25,0:2:4.25:0,4,31	0/0:28,0:18:33.11:0,33,1451	0/0:20,0:15:9.03:0,9,426	0/0:25,0:11:3.01:0,3,148	0/0:18,0:5:12.02:0,12,312	0/0:8,0:2:3.01:0,3,148	0/0:33,0:24:72.24:0,72,3405	0/0:20,0:18:33.11:0,33,1614	0/0:29,0:21:11.97:0,12,464	0/0:30,0:18:15.05:0,15,522	0/0:30,0:25:18.06:0,18,594	0/0:33,0:21:14.83:0,15,349	0/0:14,0:11:15.05:0,15,709	1/1:5,5:2:3.01:95,3,0	0/0:29,0:16:21.02:0,21,882	0/0:19,0:7:21.07:0,21,912	0/0:20,0:18:39.12:0,39,1769	0/0:19,0:7:9.03:0,9,447	0/0:27,0:20:42.14:0,42,1804	0/0:25,0:19:33.10:0,33,1318	0/0:30,0:24:27.06:0,27,1016	0/0:19,0:19:39.13:0,39,1921	0/0:31,0:25:75.24:0,75,3420	0/0:21,0:16:17.95:0,18,512	0/0:11,0:10:27.09:0,27,1309
chr10	1438247	.	TGGACTGG	T	3007.15	PASS	AC=6;AF=0.115;AN=52;BaseQRankSum=8.459;DP=666;FS=16.645;HRun=0;HaplotypeScore=96.6834;InbreedingCoeff=0.7901;MQ=33.68;MQ0=148;MQRankSum=-4.869;QD=35.38;ReadPosRankSum=3.114;VQSLOD=2.2795;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,37:35:51.18:1371,51,0	0/0:12,0:9:14.73:0,15,429	0/0:38,0:2:3.01:0,3,92	./.	0/0:30,0:27:18.06:0,18,735	0/0:16,0:14:9.03:0,9,368	0/0:32,0:22:36.12:0,36,1442	0/0:31,0:26:72.25:0,72,2769	1/1:4,16:12:24.08:645,24,0	0/0:27,0:14:42.14:0,42,1720	0/0:21,0:14:5.53:0,6,244	0/0:24,0:22:26.49:0,26,911	0/0:18,0:17:11.91:0,12,361	0/0:22,0:19:30.10:0,30,1134	0/0:20,0:17:18.06:0,18,677	0/0:20,0:17:32.91:0,33,1216	1/1:3,21:19:42.14:1130,42,0	0/0:18,0:14:8.90:0,9,365	0/0:24,0:17:48.16:0,48,1900	0/0:22,0:16:33.10:0,33,1233	0/0:28,0:20:18.02:0,18,634	0/0:27,0:16:24:0,24,689	0/0:22,0:14:15.05:0,15,601	0/0:19,0:17:24.08:0,24,952	0/0:18,0:15:2.59:0,3,122	0/0:28,0:22:59.75:0,60,2254	0/0:27,0:24:38.62:0,39,1326	./.
chr10	1442662	.	GAGTGATT	G	685.64	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=5.762;DP=526;FS=17.185;HRun=0;HaplotypeScore=83.9203;InbreedingCoeff=0.8189;MQ=56.12;MQ0=31;MQRankSum=-5.226;QD=29.81;ReadPosRankSum=0.105;VQSLOD=1.9854;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,7:7:15.05:346,15,0	0/0:7,0:7:5.36:0,5,239	0/0:25,0:6:15.05:0,15,459	0/0:22,0:1:3.01:0,3,103	0/0:32,0:31:57.19:0,57,2031	0/0:29,0:28:57.20:0,57,2248	0/0:11,0:10:27.09:0,27,1070	0/0:32,0:25:69.23:0,69,2380	1/1:3,4:6:12.04:311,12,0	0/0:30,0:28:69.19:0,69,2638	0/0:13,0:13:21.07:0,21,726	0/0:19,0:18:39.13:0,39,1533	0/0:25,0:24:54.19:0,54,2051	0/0:13,0:13:24.08:0,24,959	0/0:23,0:23:51.14:0,51,1735	0/0:13,0:13:27.07:0,27,889	1/1:0,4:2:6.02:156,6,0	0/0:14,0:11:24.08:0,24,946	0/0:9,0:7:21.07:0,21,796	0/0:22,0:22:39.13:0,39,1351	0/0:10,0:10:18.06:0,18,621	0/0:23,0:23:42.14:0,42,1549	0/0:15,0:15:30.10:0,30,1109	0/0:20,0:20:36.12:0,36,1439	0/0:19,0:19:30.10:0,30,1199	0/0:30,0:30:90.31:0,90,3593	0/0:38,0:37:84.29:0,84,3270	0/0:9,0:8:9.03:0,9,360
chr10	1442697	.	TA	T	404.54	PASS	AC=4;AF=0.074;AN=54;BaseQRankSum=5.638;DP=507;FS=1.192;HRun=3;HaplotypeScore=33.6974;InbreedingCoeff=0.7086;MQ=48.82;MQ0=54;MQRankSum=-3.580;QD=12.64;ReadPosRankSum=-0.462;VQSLOD=1.7006;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,21:13:18.06:250,18,0	0/0:5,0:5:3.01:0,3,48	./.	0/0:22,0:1:3.01:0,3,48	0/0:26,0:25:30.10:0,30,479	0/0:21,0:21:42.14:0,42,671	0/0:9,0:9:21.07:0,21,333	0/0:28,0:16:48.13:0,48,737	1/1:0,11:11:21.03:271,21,0	0/0:27,0:25:72.24:0,72,1128	0/0:12,0:11:9.03:0,9,144	0/0:17,0:16:36.12:0,36,575	0/0:21,0:21:39.11:0,39,590	0/0:20,0:20:42.13:0,42,646	0/0:20,0:20:42.14:0,42,671	0/0:11,0:11:21.07:0,21,336	0/0:10,0:5:6.02:0,6,96	0/0:15,0:10:21.07:0,21,335	0/0:11,0:5:15.05:0,15,240	0/0:22,0:21:27.09:0,27,431	0/0:11,0:11:6.02:0,6,96	0/0:23,0:23:39.12:0,39,598	0/0:14,0:13:12.04:0,12,192	0/0:16,0:16:30.09:0,30,455	0/0:17,0:17:15.05:0,15,240	0/0:27,0:26:78.25:0,78,1224	0/0:30,0:29:72.25:0,72,1141	0/0:12,0:12:12.04:0,12,192
chr10	1444524	.	C	CTAT	1316.69	PASS	AB=0.568;AC=3;AF=0.058;AN=52;BaseQRankSum=1.176;DP=624;FS=6.077;HRun=0;HaplotypeScore=59.4639;InbreedingCoeff=0.5001;MQ=37.38;MQ0=91;MQRankSum=-5.448;QD=26.87;ReadPosRankSum=1.154;VQSLOD=3.1291;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:11,13:11:18.06:442,18,0	0/0:7,0:6:9:0,9,158	./.	./.	0/0:27,0:15:18.05:0,18,304	0/0:17,0:16:30.10:0,30,548	0/0:28,0:21:32.91:0,33,611	0/0:32,0:5:15.05:0,15,279	0/1:6,19:16:63.50:977,0,63	0/0:20,0:13:36.12:0,36,668	0/0:21,0:12:15.05:0,15,280	0/0:17,0:16:21.07:0,21,388	0/0:14,0:11:30.10:0,30,559	0/0:18,0:16:33.11:0,33,599	0/0:23,0:20:33.11:0,33,615	0/0:24,0:22:36.12:0,36,667	0/0:23,0:6:15.05:0,15,279	0/0:37,0:32:42.14:0,42,767	0/0:30,0:19:57.20:0,57,1051	0/0:17,0:13:12.04:0,12,224	0/0:58,0:44:69.22:0,69,1246	0/0:17,0:14:24.08:0,24,447	0/0:19,0:10:3.01:0,3,56	0/0:34,0:29:39.13:0,39,727	0/0:20,0:14:11.99:0,12,224	0/0:25,0:19:57.20:0,57,1063	0/0:26,0:24:57.20:0,57,1059	0/0:8,0:7:21.07:0,21,392
chr10	1445345	.	TGTCC	T	1501.35	PASS	AB=0.863;AC=11;AF=0.212;AN=52;BaseQRankSum=6.169;DP=632;FS=0.000;HRun=0;HaplotypeScore=91.4806;InbreedingCoeff=0.6714;MQ=51.65;MQ0=14;MQRankSum=0.565;QD=10.57;ReadPosRankSum=-0.938;VQSLOD=2.0055;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,14:18:21:300,21,0	0/0:11,0:11:21:0,21,449	./.	./.	0/0:16,0:15:26.96:0,27,494	0/0:20,0:20:47.99:0,48,735	0/0:28,0:28:41.55:0,42,454	1/1:31,0:25:20.99:185,21,0	0/1:12,0:11:5.86:18,0,6	0/0:29,0:29:44.97:0,45,718	0/0:13,0:13:29.62:0,30,395	0/0:29,0:29:57.07:0,57,1047	0/0:26,0:26:41.44:0,41,741	0/0:32,0:32:46.78:0,47,970	0/0:23,0:23:45:0,45,853	0/0:17,0:17:30.04:0,30,518	0/1:25,0:24:91.81:92,0,485	0/0:18,0:18:50.95:0,51,1028	0/0:38,0:32:38.46:0,38,558	0/0:17,0:17:35.63:0,36,497	0/0:46,0:46:81:0,81,1494	0/0:17,0:17:41.73:0,42,708	0/0:13,0:13:24.70:0,25,407	0/0:27,0:27:62.91:0,63,975	0/0:30,0:30:53.49:0,53,807	0/1:3,7:10:48.04:193,0,48	1/1:5,21:24:42.14:685,42,0	1/1:2,13:15:12.04:196,12,0
chr10	1447133	.	G	GTA	1308.35	PASS	AB=0.964;AC=12;AF=0.231;AN=52;BaseQRankSum=-0.147;DP=271;FS=11.411;HRun=0;HaplotypeScore=64.4151;InbreedingCoeff=0.4627;MQ=58.74;MQ0=15;MQRankSum=-0.942;QD=12.95;ReadPosRankSum=-3.342;VQSLOD=1.3108;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/0:10,0:10:3.54:0,4,192	0/0:4,0:4:2.02:0,2,9	0/0:3,0:2:6.02:0,6,66	0/1:23,0:23:4.90:5,0,255	0/1:12,0:12:0:0,0,0	0/0:9,0:9:11.86:0,12,113	1/1:4,11:13:30.10:471,30,0	./.	0/0:19,0:17:42.13:0,42,512	0/1:14,0:14:19.43:19,0,274	0/0:5,0:5:6.02:0,6,73	0/0:9,0:8:5.80:0,6,56	0/0:5,0:5:6.02:0,6,68	0/0:3,0:3:3.01:0,3,37	0/0:12,0:12:9.03:0,9,107	1/1:5,0:5:5.92:39,6,0	0/0:5,0:4:11.95:0,12,127	0/0:11,0:9:27.08:0,27,322	0/0:9,0:9:20.43:0,20,230	0/0:6,0:5:14.26:0,14,155	0/0:6,0:6:9.01:0,9,110	0/0:12,0:11:15:0,15,163	0/0:11,0:10:21.05:0,21,244	0/0:21,0:21:33.09:0,33,390	1/1:1,10:10:27.09:435,27,0	0/1:5,1:6:14.54:89,0,15	1/1:13,1:14:27.09:403,27,0
chr10	1450208	.	AT	A	426.15	PASS	AC=2;AF=0.037;AN=54;BaseQRankSum=4.227;DP=358;FS=13.428;HRun=7;HaplotypeScore=38.5355;InbreedingCoeff=0.6484;MQ=61.40;MQ0=8;MQRankSum=2.185;QD=20.29;ReadPosRankSum=1.154;VQSLOD=1.8597;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:51.16:0,51,641	0/0:9,0:9:18.06:0,18,226	0/0:12,0:9:14.56:0,15,123	0/0:12,0:3:2.49:0,2,9	0/0:10,0:10:27.09:0,27,340	0/0:17,0:17:42.13:0,42,517	0/0:4,0:4:5.92:0,6,75	0/0:38,0:33:90.23:0,90,1066	0/0:5,0:5:9.03:0,9,113	0/0:14,0:14:39.11:0,39,469	0/0:21,0:21:39.12:0,39,490	0/0:6,0:6:9.03:0,9,113	0/0:5,0:5:12.04:0,12,151	0/0:11,0:11:14.65:0,15,175	0/0:7,0:7:21.04:0,21,238	0/0:6,0:6:15.52:0,16,189	1/1:0,21:21:51.12:520,51,0	0/0:15,0:13:24.05:0,24,288	0/0:16,0:15:42.12:0,42,505	0/0:13,0:13:33.06:0,33,397	0/0:9,0:9:15.05:0,15,189	./.	0/0:8,0:8:12.01:0,12,138	0/0:6,0:6:15.05:0,15,188	0/0:15,0:15:33.11:0,33,412	0/0:18,0:18:54.17:0,54,668	0/0:26,0:26:57.18:0,57,717	0/0:11,0:11:33.11:0,33,415
chr10	1452037	.	TA	T	2486.04	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=4.789;DP=614;FS=2.759;HRun=4;HaplotypeScore=59.6681;InbreedingCoeff=0.9746;MQ=52.20;MQ0=22;MQRankSum=-2.170;QD=28.58;ReadPosRankSum=0.465;VQSLOD=3.3629;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:30:72.24:0,72,1006	0/0:10,0:10:30.10:0,30,415	0/0:18,0:5:12:0,12,132	0/0:24,0:4:9.03:0,9,121	0/0:31,0:31:84.20:0,84,1131	0/0:31,0:31:84.28:0,84,1175	0/0:15,0:15:45.15:0,45,629	1/1:4,9:9:24.07:283,24,0	0/0:17,0:16:36.12:0,36,504	0/0:27,0:27:75.24:0,75,1035	0/0:15,0:14:36.08:0,36,481	0/0:23,0:23:66.21:0,66,906	0/0:17,0:17:36.12:0,36,501	0/0:16,0:16:42.14:0,42,587	0/0:20,0:20:57.19:0,57,797	0/0:26,0:26:72.23:0,72,987	0/0:34,0:34:93.31:0,93,1292	0/0:27,0:27:72.20:0,72,984	0/0:24,0:17:42.14:0,42,587	0/0:24,0:23:66.19:0,66,904	0/0:22,0:22:66.21:0,66,906	0/0:22,0:22:60.19:0,60,824	0/0:17,0:17:48.08:0,48,627	0/0:19,0:19:57.19:0,57,795	0/0:17,0:16:48.12:0,48,649	1/1:2,29:31:87.25:1032,87,0	1/1:2,28:30:81.25:971,81,0	1/1:0,13:13:30.09:360,30,0
chr10	1463734	.	A	AT	71.99	PASS	AC=10;AF=1.00;AN=10;DP=16;FS=0.000;HRun=0;HaplotypeScore=9.3111;MQ=21.32;MQ0=8;QD=8.00;VQSLOD=3.0567;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	./.	1/1:1,1:1:2.99:24,3,0	./.	./.	1/1:0,1:1:2.99:23,3,0	./.	1/1:1,1:1:3.01:38,3,0	./.	./.	./.	./.	./.	./.	./.	./.	./.	1/1:0,1:1:3.01:32,3,0	./.	1/1:1,2:2:2.98:22,3,0	./.	./.	./.	./.	./.
chr10	1466467	.	TA	T	1293.29	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.503;DP=590;FS=0.000;HRun=2;HaplotypeScore=62.7198;InbreedingCoeff=0.9980;MQ=65.63;MQ0=1;MQRankSum=-5.657;QD=28.11;ReadPosRankSum=-1.805;VQSLOD=2.7274;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,17:17:39.02:465,39,0	0/0:14,0:14:39.07:0,39,523	0/0:8,0:8:24.08:0,24,324	0/0:10,0:9:24.03:0,24,313	0/0:31,0:31:84.27:0,84,1230	0/0:27,0:27:78.26:0,78,1150	0/0:15,0:15:45.14:0,45,654	0/0:28,0:28:75.22:0,75,1053	1/1:0,14:14:42.14:544,42,0	0/0:32,0:32:96.32:0,96,1422	0/0:35,0:35:99:0,102,1479	0/0:16,0:16:48.15:0,48,698	0/0:15,0:15:45.15:0,45,674	0/0:9,0:9:27.09:0,27,405	0/0:27,0:27:81.27:0,81,1214	0/0:14,0:14:42.14:0,42,629	1/1:1,12:13:33.11:427,33,0	0/0:12,0:12:36.06:0,36,492	0/0:20,0:19:57.19:0,57,854	0/0:28,0:28:84.27:0,84,1236	0/0:20,0:20:60.10:0,60,809	0/0:26,0:26:72.23:0,72,1043	0/0:25,0:25:75.25:0,75,1124	0/0:18,0:18:54.17:0,54,787	0/0:32,0:32:90.29:0,90,1330	0/0:31,0:31:90.30:0,90,1349	0/0:26,0:26:78.25:0,78,1149	0/0:25,0:25:66.22:0,66,989
chr10	1466833	.	AT	A	1738.05	PASS	AB=0.944;AC=10;AF=0.179;AN=56;BaseQRankSum=6.621;DP=545;FS=7.360;HRun=10;HaplotypeScore=64.1264;InbreedingCoeff=0.7509;MQ=69.53;MQ0=0;MQRankSum=2.991;QD=14.25;ReadPosRankSum=-1.666;VQSLOD=3.1201;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:18:49.03:0,49,294	0/0:6,0:7:20.88:0,21,206	0/0:11,0:9:2.96:0,3,63	0/1:11,0:11:16:16,0,88	0/0:31,0:31:87.24:0,87,962	0/0:21,1:22:25.08:0,25,505	0/0:16,1:17:16.02:0,16,380	1/1:11,23:34:68.92:589,69,0	0/0:7,0:26:62.76:0,63,334	0/0:21,0:21:51.13:0,51,558	0/0:23,0:23:63.16:0,63,690	0/0:14,0:14:33.07:0,33,355	0/0:14,0:14:30.08:0,30,332	0/0:9,0:9:27.07:0,27,299	0/0:18,1:19:21.97:0,22,453	0/0:19,0:19:54.15:0,54,597	0/0:20,0:20:48.13:0,48,531	0/0:8,0:8:24.06:0,24,265	0/0:28,0:28:69.14:0,69,728	0/0:35,0:35:44.17:0,44,935	0/1:7,1:8:1.97:2,0,208	0/0:26,0:26:75.20:0,75,830	0/0:24,0:24:66.17:0,66,723	0/0:16,0:16:39.07:0,39,413	0/0:15,0:15:42.11:0,42,465	1/1:3,28:31:86.37:720,86,0	1/1:5,21:26:53.98:469,54,0	1/1:2,9:11:12:104,12,0
chr10	1466860	.	A	AT	2093.75	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=0.354;DP=524;FS=3.330;HRun=0;HaplotypeScore=61.7115;InbreedingCoeff=0.9954;MQ=84.86;MQ0=0;MQRankSum=-6.319;QD=36.10;ReadPosRankSum=2.654;VQSLOD=3.5427;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,16:18:39.13:593,39,0	0/0:7,0:7:21.07:0,21,294	0/0:23,0:22:63.14:0,63,806	0/0:15,0:15:25.70:0,26,423	0/0:32,0:32:96.31:0,96,1326	0/0:23,0:23:69.22:0,69,935	0/0:16,0:16:48.15:0,48,655	0/0:27,0:27:78.26:0,78,1083	1/1:1,23:24:72.17:1047,72,0	0/0:18,0:18:54.17:0,54,727	0/0:26,0:26:75.23:0,75,1017	0/0:15,0:15:45.10:0,45,593	0/0:12,0:12:36.11:0,36,488	0/0:10,0:10:30.09:0,30,404	0/0:17,0:17:48.14:0,48,639	0/0:16,0:16:48.15:0,48,656	1/1:0,16:16:39.13:597,39,0	0/0:7,0:7:21.07:0,21,294	0/0:26,0:26:78.21:0,78,1012	0/0:32,0:32:96.22:0,96,1287	0/0:15,0:15:45.10:0,45,560	0/0:28,0:28:84.27:0,84,1160	0/0:20,0:20:60.15:0,60,801	0/0:10,0:10:30.09:0,30,403	0/0:16,0:16:48.16:0,48,671	0/0:27,0:26:78.25:0,78,1076	0/0:17,0:17:48.16:0,48,671	0/0:10,0:10:24.08:0,24,334
chr10	1467344	.	A	AT	2374.64	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-2.413;DP=678;FS=3.683;HRun=5;HaplotypeScore=106.0709;InbreedingCoeff=0.9989;MQ=88.11;MQ0=0;MQRankSum=-1.238;QD=30.84;ReadPosRankSum=2.024;VQSLOD=3.6295;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,32:33:87.02:1114,87,0	0/0:13,0:13:36.09:0,36,387	0/0:26,0:26:68.97:0,69,684	0/0:34,0:34:71.41:0,71,737	0/0:29,0:29:75.10:0,75,790	0/0:23,0:23:67.34:0,67,667	0/0:22,0:22:57.14:0,57,612	0/0:23,0:23:51.12:0,51,548	1/1:2,23:25:55.89:783,56,0	0/0:32,0:32:87.15:0,87,908	0/0:13,0:13:36.09:0,36,387	0/0:26,0:26:69.15:0,69,727	0/0:26,0:26:76.37:0,76,766	0/0:26,0:26:73.25:0,73,752	0/0:27,0:27:69.13:0,69,729	0/0:19,1:20:51.11:0,51,540	1/1:2,17:19:44.24:621,44,0	0/0:14,0:14:42.05:0,42,438	0/0:27,0:26:72.05:0,72,726	0/0:41,0:41:99:0,108,1138	0/0:10,0:10:30.08:0,30,322	0/0:36,0:36:99:0,99,1049	0/0:25,0:25:66.08:0,66,694	0/0:19,0:19:39.10:0,39,419	0/0:18,0:18:51.06:0,51,533	0/0:32,0:32:89.25:0,89,941	0/0:29,0:28:72.26:0,72,718	0/0:10,0:10:24.06:0,24,258
chr10	1467404	.	G	GT	1381.78	PASS	AB=0.832;AC=18;AF=0.321;AN=56;BaseQRankSum=15.263;DP=770;FS=49.955;HRun=0;HaplotypeScore=219.3685;InbreedingCoeff=-0.4698;MQ=79.76;MQ0=0;MQRankSum=-12.550;QD=2.73;ReadPosRankSum=3.551;VQSLOD=1.2012;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:31,4:44:99:133,0,1084	0/1:10,2:12:52.66:53,0,383	0/0:36,0:36:99:0,102,1381	0/0:26,0:26:72.17:0,72,950	0/0:32,4:36:45.04:0,45,1049	0/1:15,7:22:99:229,0,485	0/1:24,3:29:21.63:22,0,755	0/0:32,2:34:12.22:0,12,1235	0/1:29,5:34:75.03:75,0,958	0/1:32,5:37:83.64:84,0,1168	0/0:24,1:25:45.57:0,46,975	0/1:19,4:25:76.79:77,0,688	0/1:24,2:27:33.95:34,0,808	0/1:20,7:27:99:160,0,679	0/1:21,8:29:97.67:98,0,723	0/1:12,2:15:83.93:84,0,380	0/1:20,3:24:44.29:44,0,696	0/1:12,3:18:99:120,0,451	0/1:21,4:24:99:106,0,735	0/0:35,1:36:99:0,105,1434	0/0:13,0:13:33.11:0,33,461	0/1:40,5:45:23.28:23,0,1307	0/0:32,1:33:69.45:0,69,1139	0/1:16,3:22:7.59:8,0,425	0/0:15,0:15:45.15:0,45,628	0/1:30,4:34:57.32:57,0,1151	0/1:29,7:35:99:136,0,1051	0/0:10,0:10:27.09:0,27,377
chr10	1467467	.	TA	T	557.54	PASS	AB=0.900;AC=27;AF=0.900;AN=30;BaseQRankSum=-3.388;DP=54;FS=0.000;HRun=1;HaplotypeScore=15.0688;InbreedingCoeff=0.1571;MQ=147.05;MQ0=0;MQRankSum=-4.329;QD=15.93;ReadPosRankSum=-3.388;VQSLOD=2.0787;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	1/1:2,0:2:5.99:49,6,0	0/0:12,0:11:14.15:0,14,68	0/1:7,1:6:10.83:11,0,39	1/1:0,1:1:3.01:40,3,0	./.	1/1:0,1:1:3.01:41,3,0	1/1:2,0:2:2.97:20,3,0	1/1:2,2:4:9:90,9,0	1/1:3,0:3:8.98:75,9,0	./.	1/1:2,0:2:5.75:32,6,0	./.	./.	./.	./.	./.	1/1:1,0:1:2.97:20,3,0	./.	1/1:0,2:2:3.01:41,3,0	1/1:1,0:1:3.01:42,3,0	1/1:3,0:3:6.01:66,6,0	1/1:1,1:2:6:65,6,0	./.	./.	1/1:2,0:2:6.01:66,6,0	./.	./.
chr10	1467614	.	A	ACCTTC	3160.43	PASS	AB=1.000;AC=50;AF=0.893;AN=56;BaseQRankSum=-4.121;DP=295;FS=3.440;HRun=0;HaplotypeScore=137.2253;InbreedingCoeff=0.1904;MQ=66.17;MQ0=0;MQRankSum=-4.573;QD=11.09;ReadPosRankSum=0.330;VQSLOD=3.0961;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:21:35.43:268,35,0	1/1:7,1:8:2.82:152,3,0	0/1:6,0:7:17.80:18,0,31	0/0:8,0:9:9.38:0,9,94	1/1:13,1:14:5.66:69,6,0	1/1:6,0:6:14.83:128,15,0	1/1:7,0:7:11.72:69,12,0	1/1:11,0:11:17.87:143,18,0	0/1:7,0:7:0.60:72,0,1	1/1:16,0:16:3.22:97,3,0	0/1:6,0:6:0:0,0,0	1/1:9,3:12:35.58:430,36,0	1/1:13,1:14:13.53:166,14,0	1/1:9,4:13:23.82:366,24,0	1/1:13,0:13:14.62:85,15,0	1/1:4,0:4:11.76:72,12,0	0/1:10,0:10:8.53:60,0,9	1/1:5,0:5:6.79:40,7,0	1/1:7,0:7:3.86:23,4,0	1/1:15,1:16:11.63:138,12,0	1/1:15,0:15:14.83:127,15,0	1/1:18,0:18:29.57:251,30,0	1/1:16,0:16:17.44:100,17,0	1/1:4,1:5:3.01:64,3,0	1/1:8,0:8:11.92:101,12,0	1/1:17,0:17:8.57:85,9,0	1/1:4,1:5:0.67:91,1,0	1/1:4,0:4:8.88:58,9,0
chr10	1467617	.	GACC	G	133.06	PASS	AB=0.873;AC=7;AF=0.125;AN=56;BaseQRankSum=6.373;DP=315;FS=57.883;HRun=0;HaplotypeScore=137.8532;InbreedingCoeff=-0.1517;MQ=68.13;MQ0=0;MQRankSum=-1.801;QD=1.99;ReadPosRankSum=0.427;VQSLOD=-0.0379;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:56.74:0,57,887	0/1:7,1:8:14.66:15,0,361	0/1:8,1:9:18.63:19,0,211	0/1:10,0:9:21.81:22,0,271	0/0:13,1:14:9.14:0,9,478	0/0:6,0:6:18.06:0,18,327	0/0:8,0:8:18.06:0,18,319	0/0:13,0:13:39.13:0,39,665	0/0:7,0:7:21.07:0,21,381	0/0:16,0:16:48.16:0,48,859	0/0:6,0:6:14.85:0,15,273	0/1:11,3:14:70.12:70,0,526	0/0:13,1:14:10.95:0,11,518	0/1:9,4:13:97.57:98,0,398	0/0:13,0:13:33.11:0,33,589	0/0:4,0:4:12.04:0,12,214	0/0:10,0:10:18.03:0,18,289	0/0:7,0:7:21.07:0,21,364	0/0:7,0:7:21.07:0,21,374	0/0:15,1:16:10.93:0,11,709	0/0:17,0:17:38.85:0,39,578	0/0:20,0:20:58.97:0,59,959	0/0:16,0:16:42.14:0,42,774	0/1:6,1:7:18.52:19,0,42	0/0:8,0:8:24.08:0,24,415	0/0:17,0:17:51.17:0,51,913	0/1:5,1:6:20.88:21,0,230	0/0:5,0:5:15.05:0,15,262
chr10	1467880	.	GAGA	G	2297.19	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.193;DP=516;FS=0.552;HRun=0;HaplotypeScore=84.8450;InbreedingCoeff=0.9946;MQ=78.57;MQ0=2;MQRankSum=-2.767;QD=36.46;ReadPosRankSum=2.571;VQSLOD=4.2978;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,31:31:72.25:1199,72,0	0/0:8,0:8:24.08:0,24,543	0/0:28,0:27:72.13:0,72,1479	0/0:24,0:22:54.25:0,54,1041	0/0:19,0:19:45.15:0,45,1017	0/0:18,0:18:54.19:0,54,1223	0/0:9,0:9:27.09:0,27,612	0/0:22,0:22:63.21:0,63,1365	1/1:1,12:13:27.85:542,28,0	0/0:30,0:30:87.26:0,87,1828	0/0:13,0:13:30.10:0,30,673	0/0:18,0:18:51.13:0,51,1108	0/0:10,0:10:30.10:0,30,680	0/0:20,0:20:54.19:0,54,1208	0/0:13,0:13:36.12:0,36,816	0/0:14,0:14:42.14:0,42,929	1/1:0,18:18:42.14:699,42,0	0/0:9,0:9:27.09:0,27,573	0/0:24,0:24:63.21:0,63,1355	0/0:15,0:15:45.15:0,45,976	0/0:38,0:38:99:0,108,2430	0/0:13,0:13:30.10:0,30,655	0/0:15,0:15:39.05:0,39,785	0/0:19,0:19:54.19:0,54,1224	0/0:14,0:14:33.11:0,33,747	0/0:24,0:24:66.23:0,66,1496	0/0:30,0:30:90.30:0,90,1997	0/0:6,0:6:18.06:0,18,407
chr10	1468001	.	G	GT	1523.04	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=5.026;DP=524;FS=1.578;HRun=10;HaplotypeScore=59.1084;InbreedingCoeff=0.8621;MQ=72.84;MQ0=0;MQRankSum=-1.293;QD=18.57;ReadPosRankSum=-0.648;VQSLOD=3.9737;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:14,24:37:78.16:815,78,0	0/0:7,0:7:17.98:0,18,148	0/0:15,0:15:11.84:0,12,122	0/0:9,0:10:1.57:0,2,63	0/0:27,0:28:55.90:0,56,442	0/0:16,0:16:38.91:0,39,317	0/0:10,0:10:20.96:0,21,172	0/0:18,0:18:26.87:0,27,216	1/1:5,18:23:51.13:544,51,0	0/0:19,0:19:41.92:0,42,345	0/0:17,0:18:37.24:0,37,300	0/0:21,0:21:50.93:0,51,419	0/0:11,0:11:26.95:0,27,218	0/0:24,0:24:62.92:0,63,517	0/0:15,0:15:14.72:0,15,268	0/0:15,0:15:32.92:0,33,271	1/1:5,1:21:56.82:306,57,0	0/0:17,1:19:17.92:0,18,335	0/0:18,0:19:37.95:0,38,299	0/0:28,1:29:30.89:0,31,457	0/0:14,1:16:5.99:0,6,243	0/0:11,0:11:29.95:0,30,243	0/0:24,0:26:64.94:0,65,520	0/0:21,0:21:50.93:0,51,419	0/0:13,0:14:18.26:0,18,254	0/0:31,0:32:82.91:0,83,668	0/0:22,0:23:52.92:0,53,421	0/0:4,0:4:11.99:0,12,99
chr10	1470032	.	TTCTCTC	T	163.11	PASS	AB=1.000;AC=9;AF=0.180;AN=50;BaseQRankSum=2.139;DP=411;FS=3.037;HRun=0;HaplotypeScore=86.3145;InbreedingCoeff=0.1167;MQ=61.55;MQ0=19;MQRankSum=-0.052;QD=1.25;ReadPosRankSum=0.249;VQSLOD=1.6283;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:25:9.03:168,9,0	0/0:4,0:4:3.01:0,3,64	./.	./.	0/0:13,0:13:9.50:0,10,205	0/1:11,0:11:6.31:6,0,266	0/0:15,0:11:12.02:0,12,237	1/1:33,0:33:2.89:21,3,0	0/1:16,0:15:4.38:4,0,192	0/1:13,0:13:6.21:6,0,72	0/0:3,0:3:3.01:0,3,60	0/0:14,0:13:24.07:0,24,496	0/0:6,0:5:1.77:0,2,4	0/0:13,0:11:3.01:0,3,50	0/0:17,0:17:21.06:0,21,419	0/0:11,0:10:12.04:0,12,269	0/0:7,4:10:0:0,0,0	0/0:11,0:11:15.03:0,15,252	0/0:19,0:18:0.48:0,0,252	./.	0/0:20,0:19:21.02:0,21,315	0/1:13,0:12:10.14:10,0,101	0/0:10,0:10:6:0,6,99	0/0:21,0:20:2.67:0,3,342	0/0:9,0:7:3.01:0,3,78	0/0:15,0:14:15.02:0,15,323	0/1:19,0:17:64.91:65,0,78	0/0:15,0:14:6.02:0,6,135
chr10	1470232	.	A	AACC	134.05	PASS	AB=1.000;AC=5;AF=0.139;AN=36;BaseQRankSum=-3.174;DP=215;FS=2.634;HRun=0;HaplotypeScore=35.5975;InbreedingCoeff=0.2690;MQ=82.00;MQ0=7;MQRankSum=1.467;QD=3.35;ReadPosRankSum=0.034;VQSLOD=1.3248;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:10,3:12:6.02:113,6,0	0/0:3,0:3:3.01:0,3,38	./.	0/1:19,0:16:0:0,0,0	./.	0/0:5,0:5:2.60:0,3,38	0/0:11,0:11:6.02:0,6,77	./.	1/1:7,1:8:6.02:112,6,0	0/0:9,0:9:5.69:0,6,77	./.	./.	0/0:2,0:2:3.01:0,3,38	./.	0/0:6,0:7:2.98:0,3,21	0/0:4,0:4:3.01:0,3,38	0/0:10,0:12:11.66:0,12,74	./.	0/0:9,0:9:3.01:0,3,37	0/0:5,0:5:6.02:0,6,76	0/0:14,0:13:6.02:0,6,76	0/0:4,0:4:3.01:0,3,38	./.	0/0:9,0:9:6.02:0,6,76	0/0:6,0:6:3.01:0,3,38	./.	0/0:8,0:10:2.97:0,3,21	./.
chr10	1470665	.	AAC	A	41.71	PASS	AB=0.973;AC=9;AF=0.161;AN=56;BaseQRankSum=3.876;DP=498;FS=11.288;HRun=0;HaplotypeScore=66.3287;InbreedingCoeff=-0.0714;MQ=55.02;MQ0=19;MQRankSum=1.981;QD=0.33;ReadPosRankSum=0.599;VQSLOD=0.5364;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:27:11.98:12,0,39	0/0:5,0:5:7.83:0,8,83	0/0:44,1:27:6.02:0,6,83	0/0:54,0:20:6.19:0,6,31	0/1:18,1:19:34.14:34,0,335	0/1:9,1:10:15.52:16,0,214	0/0:19,0:19:36.12:0,36,518	0/0:20,0:19:19.25:0,19,182	0/1:15,0:15:12.45:23,0,12	0/1:18,1:19:15.38:15,0,409	0/0:13,0:12:24.04:0,24,325	0/0:13,0:13:26.76:0,27,457	0/0:12,0:12:27.07:0,27,377	0/0:17,0:16:3.15:0,3,396	0/0:12,0:12:27.09:0,27,411	0/0:11,0:11:23.91:0,24,334	1/1:11,0:11:1.75:11,2,0	0/0:13,0:14:24.01:0,24,319	0/0:14,0:14:9.03:0,9,120	0/1:10,0:10:13.43:13,0,225	0/0:29,0:29:51.18:0,51,727	0/0:9,0:9:15.05:0,15,220	0/0:12,2:14:1.15:0,1,413	0/0:23,0:23:42.14:0,42,629	0/1:15,0:15:47.82:48,0,383	0/0:26,0:27:48.23:0,48,481	0/0:14,0:13:7.26:0,7,75	0/0:7,0:7:8.45:0,8,95
chr10	1470693	.	GAC	G	49.85	PASS	AB=0.914;AC=15;AF=0.268;AN=56;BaseQRankSum=5.264;DP=566;FS=2.811;HRun=0;HaplotypeScore=74.4353;InbreedingCoeff=0.1384;MQ=51.61;MQ0=22;MQRankSum=-1.325;QD=0.22;ReadPosRankSum=0.249;VQSLOD=1.6292;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:36,0:36:5.23:23,5,0	0/1:5,2:7:17.88:18,0,199	0/0:38,0:12:12.38:0,12,200	0/0:48,0:12:17.49:0,17,199	0/1:16,5:21:32.92:33,0,392	0/0:11,3:14:23.24:0,23,301	0/0:18,0:18:30.07:0,30,433	0/1:20,0:20:2.87:3,0,311	1/1:18,0:18:9.32:36,9,0	0/1:23,1:24:5.11:5,0,553	0/0:16,0:15:33.11:0,33,516	0/0:18,1:18:9.27:0,9,579	0/1:14,0:14:5.53:6,0,369	0/1:20,1:19:29.59:30,0,485	0/0:15,0:15:33.11:0,33,514	0/1:10,2:12:21.14:21,0,218	1/1:23,0:23:3.67:15,4,0	0/0:17,0:17:4.07:0,4,404	0/1:14,1:15:7.87:8,0,330	0/1:13,1:14:2.94:3,0,362	0/0:33,0:33:27.20:0,27,875	0/0:8,0:8:21.07:0,21,327	0/0:16,0:16:26.90:0,27,388	0/0:27,0:27:56.71:0,57,888	0/0:15,0:15:30.10:0,30,471	0/0:29,0:29:63.18:0,63,874	0/0:21,0:20:33.11:0,33,485	0/0:6,0:6:15.05:0,15,226
chr10	1473911	.	T	TA	1598.29	PASS	AC=4;AF=0.074;AN=54;BaseQRankSum=-1.387;DP=555;FS=0.000;HRun=4;HaplotypeScore=51.7873;InbreedingCoeff=0.9120;MQ=55.17;MQ0=19;MQRankSum=-1.026;QD=28.04;ReadPosRankSum=0.074;VQSLOD=2.5441;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,29:33:57.06:981,57,0	0/0:8,0:8:21.06:0,21,238	./.	0/0:7,0:1:3.01:0,3,31	0/0:28,0:28:72.19:0,72,804	0/0:16,0:16:39.09:0,39,433	0/0:9,0:7:21.04:0,21,228	0/0:28,0:18:51.13:0,51,569	1/1:1,22:23:54.18:738,54,0	0/0:21,0:20:60.17:0,60,680	0/0:27,0:27:69.19:0,69,783	0/0:12,0:12:36.10:0,36,408	0/0:21,0:21:63.18:0,63,714	0/0:15,0:15:45.11:0,45,501	0/0:19,0:19:54.15:0,54,612	0/0:21,0:21:60.15:0,60,671	0/0:28,0:28:78.19:0,78,862	0/0:19,0:19:42.10:0,42,465	0/0:24,0:19:51.60:0,52,569	0/0:40,0:40:99:0,108,1217	0/0:10,0:10:27.08:0,27,306	0/0:17,0:16:48.14:0,48,544	0/0:27,0:27:78.21:0,78,874	0/0:17,0:17:36.10:0,36,408	0/0:20,0:20:60.14:0,60,659	0/0:19,0:19:54.14:0,54,602	0/0:22,0:22:60.17:0,60,680	0/0:13,0:12:33.09:0,33,373
chr10	1476299	.	GA	G	1528.01	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=10.992;DP=617;FS=9.445;HRun=8;HaplotypeScore=69.4534;InbreedingCoeff=0.8247;MQ=58.11;MQ0=0;MQRankSum=-1.560;QD=13.89;ReadPosRankSum=1.210;VQSLOD=2.7885;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,36:40:93.04:883,93,0	0/0:6,0:6:18.06:0,18,217	0/0:13,0:7:15:0,15,165	0/0:12,0:9:14.01:0,14,224	0/0:27,0:27:63.16:0,63,744	0/0:31,0:31:78.22:0,78,922	0/0:16,0:16:39.11:0,39,459	0/0:27,0:25:30.92:0,31,281	1/1:1,15:15:33.05:318,33,0	0/0:41,0:41:99:0,111,1327	0/0:23,0:23:66.18:0,66,777	0/0:18,0:18:42.13:0,42,507	0/0:29,0:29:72.20:0,72,846	0/0:23,0:23:63.17:0,63,736	0/0:17,0:17:50.17:0,50,575	0/0:22,0:22:63.19:0,63,752	1/1:2,17:19:48.08:463,48,0	0/0:26,0:26:56.89:0,57,652	0/0:14,0:9:24.07:0,24,290	0/0:26,0:26:66.20:0,66,797	0/0:29,0:29:72.22:0,72,870	0/0:20,0:20:60.17:0,60,715	0/0:25,0:25:69.20:0,69,814	0/0:13,0:13:39.11:0,39,459	0/0:21,0:21:60.18:0,60,725	0/0:21,0:21:53.95:0,54,269	0/1:34,0:34:11.34:11,0,293	0/0:5,0:5:11.72:0,12,69
chr10	1476724	.	TTC	T	1087.68	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.681;DP=540;FS=0.000;HRun=0;HaplotypeScore=57.5030;InbreedingCoeff=0.9945;MQ=55.24;MQ0=8;MQRankSum=3.981;QD=32.96;ReadPosRankSum=0.533;VQSLOD=5.0506;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,14:17:36.12:587,36,0	0/0:9,0:9:27.09:0,27,549	0/0:18,0:6:18.06:0,18,356	0/0:19,0:13:39.09:0,39,732	0/0:27,0:26:69.24:0,69,1391	0/0:17,0:17:51.17:0,51,995	0/0:14,0:14:42.14:0,42,843	0/0:28,0:24:72.25:0,72,1429	1/1:1,15:16:39.13:622,39,0	0/0:20,0:20:60.21:0,60,1220	0/0:18,0:17:48.15:0,48,930	0/0:12,0:12:36.12:0,36,731	0/0:24,0:24:72.25:0,72,1463	0/0:18,0:18:54.19:0,54,1088	0/0:25,0:25:75.26:0,75,1493	0/0:10,0:10:27.09:0,27,539	0/0:29,0:29:78.27:0,78,1571	0/0:24,0:23:66.23:0,66,1296	0/0:19,0:17:51.17:0,51,1018	0/0:25,0:25:75.26:0,75,1476	0/0:16,0:16:48.16:0,48,975	0/0:23,0:23:66.23:0,66,1318	0/0:18,0:18:54.19:0,54,1080	0/0:14,0:14:38.53:0,39,755	0/0:15,0:15:45.15:0,45,914	0/0:23,0:22:66.23:0,66,1338	0/0:28,0:28:84.29:0,84,1674	0/0:14,0:14:42.14:0,42,826
chr10	1477151	.	T	TAA	3182.68	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-6.924;DP=550;FS=0.483;HRun=6;HaplotypeScore=62.3808;InbreedingCoeff=0.9870;MQ=56.92;MQ0=13;MQRankSum=1.192;QD=37.89;ReadPosRankSum=-1.092;VQSLOD=2.9896;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,27:33:72.20:1175,72,0	0/0:6,0:6:18.06:0,18,220	0/0:25,0:11:27.07:0,27,316	0/0:16,0:10:27.01:0,27,310	0/0:35,0:35:99:0,99,1207	0/0:26,0:25:72.21:0,72,865	0/0:6,0:6:18.06:0,18,220	0/0:28,0:24:66.16:0,66,779	1/1:2,20:22:54.14:882,54,0	0/0:25,0:25:63.16:0,63,753	0/0:19,0:19:50.99:0,51,599	0/0:12,0:12:36.09:0,36,425	0/0:17,0:17:45.12:0,45,536	0/0:8,0:8:21.06:0,21,256	0/0:16,0:16:45.14:0,45,549	0/0:14,0:14:36.11:0,36,439	1/1:1,28:29:75.26:1268,75,0	0/0:25,0:26:68.85:0,69,841	0/0:10,0:7:21.05:0,21,243	0/0:28,0:28:75.21:0,75,902	0/0:22,0:22:60.19:0,60,732	0/0:23,0:23:66.19:0,66,793	0/0:21,0:21:54.17:0,54,659	0/0:10,0:11:23.87:0,24,292	0/0:18,0:18:51.16:0,51,622	0/0:22,0:22:63.20:0,63,768	0/0:24,0:24:66.19:0,66,792	0/0:7,0:7:18.05:0,18,219
chr10	1477603	.	G	GA	1101.69	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-6.741;DP=633;FS=1.282;HRun=9;HaplotypeScore=61.0758;InbreedingCoeff=0.9490;MQ=57.62;MQ0=10;MQRankSum=1.181;QD=22.48;ReadPosRankSum=-0.149;VQSLOD=4.3333;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,17:23:56.82:593,57,0	0/0:7,0:7:20.98:0,21,179	0/0:16,0:5:8.96:0,9,72	0/0:13,1:6:11.99:0,12,104	0/0:28,0:28:77.98:0,78,677	0/0:19,1:20:17.79:0,18,384	0/0:21,0:21:52.99:0,53,441	0/0:39,0:37:80:0,80,676	1/1:4,22:26:57.15:631,57,0	0/0:29,0:29:74.98:0,75,649	0/0:19,0:19:47.98:0,48,417	0/0:14,0:14:32.98:0,33,286	0/0:17,0:17:47.99:0,48,416	0/0:22,1:22:39.63:0,40,451	0/0:21,0:21:56.98:0,57,494	0/0:16,0:16:41.98:0,42,365	0/0:42,0:42:99:0,111,963	0/0:24,0:24:65.97:0,66,572	0/0:18,0:17:41.97:0,42,360	0/0:30,0:29:71.80:0,72,610	0/0:27,0:27:48.33:0,48,566	0/0:18,0:18:47.97:0,48,413	0/0:21,0:20:53.97:0,54,466	0/0:16,0:16:47.97:0,48,412	0/0:22,0:22:65.99:0,66,573	0/0:22,0:22:56.99:0,57,495	0/0:37,0:37:95.97:0,96,833	0/0:18,0:19:31.95:0,32,266
chr10	1479612	.	AAT	A	1082.26	PASS	AB=0.864;AC=14;AF=0.318;AN=44;BaseQRankSum=5.722;DP=211;FS=1.685;HRun=0;HaplotypeScore=33.8857;InbreedingCoeff=0.5578;MQ=63.35;MQ0=1;MQRankSum=0.075;QD=9.93;ReadPosRankSum=-0.004;VQSLOD=3.0211;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:16:8.52:41,9,0	0/0:2,0:2:6.01:0,6,74	./.	./.	0/0:9,0:9:12.02:0,12,170	0/0:10,0:10:18.06:0,18,285	./.	1/1:8,19:27:30.15:539,30,0	1/1:14,0:14:5.58:27,6,0	0/0:5,0:5:15.04:0,15,223	0/0:7,0:7:9.03:0,9,131	0/0:3,0:3:6:0,6,70	0/0:7,0:7:15.05:0,15,238	0/0:7,0:7:18.05:0,18,268	0/0:8,0:8:5.69:0,6,60	0/0:3,0:3:6.02:0,6,94	0/0:7,0:7:0.46:0,0,1	0/1:7,2:9:12.66:13,0,249	0/1:9,1:10:17.59:18,0,225	0/0:3,0:3:3.01:0,3,45	./.	./.	0/0:3,0:3:6.02:0,6,91	./.	0/0:7,0:7:15.05:0,15,243	1/1:2,6:8:15.05:183,15,0	1/1:3,5:9:5.80:51,6,0	1/1:6,10:16:30.09:367,30,0
chr10	1479615	.	ATATATATATATATATG	A	448.11	PASS	AB=1.000;AC=4;AF=0.087;AN=46;BaseQRankSum=3.621;DP=195;FS=4.052;HRun=0;HaplotypeScore=82.9477;InbreedingCoeff=0.3259;MQ=64.02;MQ0=1;MQRankSum=-3.651;QD=12.45;ReadPosRankSum=0.551;VQSLOD=0.9572;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:5,11:16:9.03:405,9,0	0/0:2,0:2:6.01:0,6,256	./.	0/1:7,0:3:0:0,0,0	0/0:8,0:8:12.04:0,12,915	0/0:9,0:9:21.07:0,21,1193	./.	0/0:26,0:26:56.97:0,57,1840	0/1:13,0:13:15.56:137,0,16	0/0:5,0:5:15.05:0,15,1149	0/0:7,0:7:12.04:0,12,721	0/0:3,0:3:6.01:0,6,98	0/0:7,0:7:18.06:0,18,1041	0/0:7,0:7:18.06:0,18,1252	0/0:6,0:6:6.02:0,6,399	0/0:3,0:3:6.02:0,6,248	0/0:7,0:7:3.01:0,3,36	0/0:9,0:9:24.03:0,24,1123	0/0:7,0:7:18.06:0,18,876	0/0:2,0:2:3.01:0,3,72	./.	./.	0/0:3,0:3:6.02:0,6,148	./.	0/0:7,0:7:15.05:0,15,1138	0/0:8,0:8:18.06:0,18,956	0/0:9,0:9:6.02:0,6,298	0/0:16,0:16:30.10:0,30,1439
chr10	1479617	.	ATATATATATATATG	A	438.16	PASS	AB=1.000;AC=5;AF=0.100;AN=50;BaseQRankSum=3.375;DP=187;FS=3.990;HRun=0;HaplotypeScore=70.6140;InbreedingCoeff=0.4372;MQ=64.47;MQ0=0;MQRankSum=-2.671;QD=12.89;ReadPosRankSum=0.283;VQSLOD=1.0252;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:16:9.03:296,9,0	0/0:2,0:2:3.01:0,3,205	0/0:2,0:1:2.68:0,3,11	0/1:5,0:3:0:0,0,0	0/0:8,0:8:12.04:0,12,815	0/0:8,0:8:21.05:0,21,1044	./.	0/0:24,0:24:42.08:0,42,1394	1/1:5,8:13:5.47:241,5,0	0/0:5,0:5:15.05:0,15,1021	0/0:7,0:7:12.04:0,12,644	0/0:3,0:3:3.01:0,3,73	0/0:6,0:6:18.06:0,18,914	0/0:7,0:7:18.06:0,18,1122	0/0:6,0:6:6.02:0,6,348	0/0:3,0:3:6.02:0,6,200	0/0:7,0:7:3.01:0,3,36	0/0:9,0:9:21.06:0,21,967	0/0:6,0:6:18.05:0,18,777	0/0:2,0:2:3.01:0,3,48	./.	./.	0/0:3,0:3:6.02:0,6,147	0/0:1,0:1:3.01:0,3,150	0/0:7,0:7:15.05:0,15,1011	0/0:8,0:8:21.07:0,21,949	0/0:9,0:9:6.02:0,6,247	0/0:16,0:16:30.10:0,30,1163
chr10	1480760	.	TGGGTGTAGTGGTGCATACTTGTAATTCCAGCACCGGG	T	1624.61	PASS	AC=4;AF=0.074;AN=54;BaseQRankSum=4.497;DP=491;FS=8.571;HRun=0;HaplotypeScore=408.3398;InbreedingCoeff=0.9046;MQ=77.02;MQ0=0;MQRankSum=-4.472;QD=36.10;ReadPosRankSum=2.234;VQSLOD=0.5945;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:2,27:29:5.95:304,6,0	./.	0/0:15,0:14:36.12:0,36,2187	0/0:20,0:19:51.08:0,51,2937	0/0:20,0:20:60.19:0,60,8126	0/0:18,0:18:51.16:0,51,6311	0/0:19,0:19:54.19:0,54,6116	0/0:32,0:32:81.27:0,81,7438	1/1:1,15:16:15.05:1428,15,0	0/0:18,0:18:51.17:0,51,6923	0/0:10,0:10:30.10:0,30,4609	0/0:13,0:13:39.13:0,39,5508	0/0:18,0:18:51.18:0,51,6305	0/0:27,0:27:78.25:0,78,9793	0/0:23,0:23:66.20:0,66,8783	0/0:14,0:14:42.14:0,42,5603	0/0:35,0:35:99:0,102,12898	0/0:6,0:6:15.05:0,15,1893	0/0:19,0:19:54.14:0,54,5539	0/0:18,0:18:51.18:0,51,7007	0/0:23,0:23:66.23:0,66,9058	0/0:6,0:6:18.06:0,18,2566	0/0:6,0:6:12.04:0,12,1190	0/0:21,0:21:54.19:0,54,7831	0/0:10,0:10:24.08:0,24,3727	0/0:20,0:20:57.20:0,57,7092	0/0:24,0:24:72.21:0,72,8859	0/0:11,0:11:33.11:0,33,4131
chr10	1481055	.	GTATA	G	1449.73	PASS	AC=10;AF=0.238;AN=42;BaseQRankSum=2.027;DP=199;FS=3.774;HRun=0;HaplotypeScore=36.7172;InbreedingCoeff=0.5479;MQ=64.53;MQ0=2;MQRankSum=-3.237;QD=19.08;ReadPosRankSum=-2.673;VQSLOD=2.4243;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:2.68:0,3,11	./.	1/1:15,0:8:2.36:8,2,0	0/0:14,0:5:2.74:0,3,50	0/0:6,0:7:15.05:0,15,350	0/0:7,0:7:9.01:0,9,172	./.	1/1:17,20:36:50.49:959,50,0	0/0:2,0:2:2.60:0,3,10	0/0:2,0:2:3.01:0,3,74	./.	0/0:2,0:2:2.99:0,3,24	0/0:6,0:6:3.01:0,3,74	./.	0/0:3,0:4:6.02:0,6,127	0/0:3,0:3:6.02:0,6,148	0/0:13,0:12:0:0,0,0	0/0:6,0:10:23.07:0,23,296	0/0:8,0:8:9.03:0,9,223	0/0:5,0:4:0:0,0,0	./.	0/0:2,0:2:0:0,0,0	./.	./.	0/0:6,0:6:12.04:0,12,289	1/1:0,2:2:6.02:94,6,0	1/1:4,3:8:9.50:150,9,0	1/1:7,5:12:24.90:367,25,0
chr10	1481103	.	TTA	T	1305.26	PASS	AB=1.000;AC=10;AF=0.238;AN=42;BaseQRankSum=1.468;DP=155;FS=5.793;HRun=0;HaplotypeScore=27.3897;InbreedingCoeff=0.4343;MQ=64.39;MQ0=11;MQRankSum=0.465;QD=12.55;ReadPosRankSum=-0.358;VQSLOD=1.9123;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	0/0:1,0:1:3.01:0,3,51	0/1:14,0:4:8.88:9,0,13	0/1:42,0:8:5.44:5,0,8	0/0:8,0:8:20.81:0,21,316	0/0:0,0:2:3:0,3,27	0/0:0,0:1:3:0,3,27	1/1:12,19:31:69.22:887,69,0	./.	0/0:3,0:3:9.03:0,9,152	0/0:2,0:2:6.02:0,6,101	0/0:1,0:1:3.01:0,3,45	0/0:3,0:3:9.03:0,9,151	./.	0/0:1,0:2:3:0,3,27	0/0:1,0:1:3:0,3,25	./.	0/0:5,0:5:12.04:0,12,194	0/0:7,0:7:13.26:0,13,177	./.	0/0:3,0:3:9.03:0,9,152	./.	0/0:1,0:1:3.01:0,3,51	./.	0/0:0,0:7:18.01:0,18,160	1/1:0,1:1:3.01:39,3,0	1/1:0,9:9:27.09:347,27,0	1/1:2,4:6:10.73:152,11,0
chr10	1481685	.	T	TTCTC	3943.57	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=-7.119;DP=476;FS=0.542;HRun=0;HaplotypeScore=76.0436;InbreedingCoeff=0.8621;MQ=80.80;MQ0=0;MQRankSum=-2.323;QD=56.34;ReadPosRankSum=2.393;VQSLOD=4.9693;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,28:31:66.23:1754,66,0	0/0:8,0:8:24.08:0,24,456	0/0:16,0:16:45.15:0,45,829	0/0:12,0:12:17.87:0,18,361	0/0:24,0:24:72.25:0,72,1367	0/0:14,0:14:36.12:0,36,682	0/0:16,0:16:48.16:0,48,912	0/0:23,0:23:69.22:0,69,1250	1/1:2,18:22:51.17:1375,51,0	0/0:24,0:24:72.25:0,72,1367	0/0:16,0:16:45.15:0,45,854	0/0:14,0:14:39.12:0,39,709	0/0:9,0:9:27.09:0,27,512	0/0:7,0:7:21.07:0,21,399	0/0:16,0:16:48.16:0,48,912	0/0:15,0:15:45.15:0,45,855	1/1:2,9:11:30.10:809,30,0	0/1:6,0:6:5.49:5,0,267	0/0:16,0:16:45.15:0,45,855	0/0:23,0:23:66.23:0,66,1253	0/0:13,0:13:36.11:0,36,651	0/0:25,0:25:75.25:0,75,1393	0/0:27,0:27:78.27:0,78,1480	0/0:19,0:19:57.18:0,57,1032	0/0:12,0:12:36.12:0,36,682	0/0:21,0:21:63.22:0,63,1196	0/0:30,0:28:90.31:0,90,1707	0/0:6,0:6:18.06:0,18,342
chr10	1482690	.	TA	T	7769.34	PASS	AB=0.813;AC=54;AF=0.964;AN=56;BaseQRankSum=5.826;DP=532;FS=32.083;HRun=3;HaplotypeScore=130.6138;InbreedingCoeff=-0.0461;MQ=83.24;MQ0=0;MQRankSum=-0.520;QD=14.60;ReadPosRankSum=6.194;VQSLOD=2.7080;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,30:33:55.99:514,56,0	0/1:2,3:5:16.02:47,0,16	1/1:20,0:20:30.27:160,30,0	0/1:23,0:23:25.70:205,0,26	1/1:2,15:17:44.10:285,44,0	1/1:2,17:19:50.05:320,50,0	1/1:5,19:24:28.27:277,28,0	1/1:3,22:25:63.16:309,63,0	1/1:0,16:16:47.19:308,47,0	1/1:4,16:20:5.72:213,6,0	1/1:2,12:14:32.35:208,32,0	1/1:2,18:20:52.98:351,53,0	1/1:1,18:19:52.62:320,53,0	1/1:1,20:21:61.71:398,62,0	1/1:3,20:23:35.66:319,36,0	1/1:1,21:22:61.65:403,62,0	1/1:1,18:19:47.51:242,48,0	1/1:0,10:10:29.02:162,29,0	1/1:6,14:20:5.70:212,6,0	1/1:5,17:22:36.41:335,36,0	1/1:0,14:14:29.24:173,29,0	1/1:2,20:22:52.67:355,53,0	1/1:1,9:10:26.49:171,26,0	1/1:4,23:27:45.94:383,46,0	1/1:1,11:12:25.32:198,25,0	1/1:3,15:17:46.47:275,46,0	1/1:3,30:33:84.37:546,84,0	1/1:0,4:4:11.85:81,12,0
chr10	1482741	.	AT	A	8416.26	PASS	AB=1.000;AC=53;AF=0.946;AN=56;BaseQRankSum=-2.519;DP=553;FS=3.929;HRun=3;HaplotypeScore=136.9452;InbreedingCoeff=-0.0523;MQ=60.60;MQ0=0;MQRankSum=-0.740;QD=15.22;ReadPosRankSum=5.844;VQSLOD=4.2887;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:42,0:42:99:735,112,0	0/1:7,0:7:4.22:76,0,4	1/1:14,0:13:34.09:217,34,0	0/1:9,0:7:7.77:66,0,8	1/1:18,0:18:44.25:288,44,0	1/1:23,0:23:12.83:279,13,0	1/1:22,0:22:60.90:356,61,0	1/1:29,0:29:58.31:361,58,0	1/1:20,0:20:52.72:327,53,0	1/1:20,0:20:50.49:294,50,0	1/1:20,0:20:53.22:358,53,0	1/1:24,0:24:67.51:442,68,0	1/1:9,11:20:4.77:179,5,0	1/1:24,0:24:61.10:379,61,0	1/1:24,0:23:61.32:374,61,0	1/1:19,0:19:55.72:359,56,0	1/1:16,0:16:38.40:266,38,0	1/1:8,0:8:20.34:117,20,0	1/1:19,0:18:43.24:243,43,0	1/1:29,0:29:79.46:502,79,0	1/1:18,0:18:34.86:200,35,0	0/1:21,0:21:8.69:261,0,9	1/1:14,0:14:38.27:247,38,0	1/1:26,0:26:47.52:393,48,0	1/1:14,0:14:35.70:255,36,0	1/1:18,0:18:52.29:312,52,0	1/1:27,0:27:23.55:368,24,0	1/1:8,0:8:23.63:160,24,0
chr10	1482885	.	TA	T	1085.48	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.695;DP=714;FS=0.632;HRun=2;HaplotypeScore=81.0058;InbreedingCoeff=0.9970;MQ=52.29;MQ0=12;MQRankSum=-5.436;QD=18.09;ReadPosRankSum=-0.614;VQSLOD=3.4552;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:13,19:32:55.36:619,55,0	0/0:11,0:11:33.11:0,33,494	0/0:34,0:31:87.22:0,87,1180	0/0:24,0:22:60.16:0,60,857	0/0:29,0:29:72.23:0,72,1051	0/0:18,0:16:42.10:0,42,602	0/0:31,0:28:81.25:0,81,1173	0/0:39,0:39:99:0,114,1656	1/1:5,11:13:27.08:327,27,0	0/0:37,0:36:84.28:0,84,1258	0/0:31,0:31:78.23:0,78,1139	0/0:22,0:21:60.20:0,60,897	0/0:13,0:11:24.08:0,24,358	0/0:30,0:30:63.16:0,63,916	0/0:22,0:19:54.17:0,54,788	0/0:17,0:17:48.07:0,48,650	1/1:2,10:12:22.44:282,22,0	0/0:30,0:27:72.18:0,72,1012	0/0:16,0:14:42.13:0,42,612	0/0:39,0:39:99:0,102,1502	0/0:39,0:35:90.30:0,90,1347	0/0:27,0:26:63.21:0,63,942	0/0:24,0:24:63.20:0,63,923	0/0:31,0:31:84.15:0,84,1168	0/0:22,0:21:57.19:0,57,831	0/0:22,0:20:54.15:0,54,785	0/0:38,0:37:99:0,108,1565	0/0:8,0:8:24.08:0,24,359
chr10	1483518	.	TA	T	1591.25	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=3.913;DP=604;FS=5.814;HRun=1;HaplotypeScore=78.1545;InbreedingCoeff=0.9993;MQ=79.79;MQ0=0;MQRankSum=-1.615;QD=36.16;ReadPosRankSum=2.523;VQSLOD=4.0631;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:69.23:0,69,1088	0/0:10,0:10:30.10:0,30,478	0/0:25,0:25:74.05:0,74,1111	0/0:25,0:25:75.25:0,75,1177	0/0:30,0:30:90.31:0,90,1421	0/0:27,0:27:75.25:0,75,1184	0/0:11,0:11:33.03:0,33,469	0/0:38,0:38:99:0,114,1778	1/1:0,26:26:75.25:1042,75,0	0/0:30,0:30:90.30:0,90,1417	0/0:15,0:15:42.09:0,42,640	0/0:24,0:24:69.22:0,69,1063	0/0:26,0:26:72.24:0,72,1132	0/0:21,0:21:60.16:0,60,927	0/0:22,0:22:60.20:0,60,947	0/0:17,0:17:48.16:0,48,765	1/1:0,18:18:48.16:671,48,0	0/0:10,0:10:30.07:0,30,444	0/0:16,0:16:48.15:0,48,721	0/0:23,0:23:69.18:0,69,1045	0/0:27,0:27:81.24:0,81,1245	0/0:23,0:23:69.23:0,69,1086	0/0:14,0:14:42.14:0,42,670	0/0:20,0:20:57.19:0,57,908	0/0:15,0:15:45.14:0,45,676	0/0:17,0:17:51.17:0,51,815	0/0:36,0:36:99:0,102,1595	0/0:15,0:15:45.15:0,45,718
chr10	1483765	.	AAAT	A	2943.50	PASS	AB=0.583;AC=7;AF=0.125;AN=56;BaseQRankSum=10.202;DP=541;FS=1.565;HRun=0;HaplotypeScore=80.2286;InbreedingCoeff=0.8303;MQ=74.34;MQ0=0;MQRankSum=-4.824;QD=35.04;ReadPosRankSum=-1.420;VQSLOD=3.9300;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:93.29:0,93,1980	0/0:5,0:5:12.04:0,12,249	0/0:14,0:14:39.03:0,39,717	0/0:9,0:9:22.25:0,22,335	0/0:32,0:32:78.25:0,78,1628	0/0:27,0:27:75.24:0,75,1593	0/0:14,0:14:39.13:0,39,837	1/1:2,26:27:75.18:1107,75,0	0/0:21,0:21:57.20:0,57,1232	0/0:28,0:28:75.16:0,75,1540	0/0:28,0:28:75.17:0,75,1525	0/0:16,0:16:48.16:0,48,1037	0/0:16,0:16:48.16:0,48,1044	0/0:13,0:13:39.13:0,39,850	0/0:16,0:16:45.15:0,45,941	0/0:13,0:13:39.13:0,39,849	0/0:25,0:25:72.25:0,72,1559	0/0:7,0:7:18.06:0,18,360	0/0:14,0:14:36.11:0,36,746	0/0:17,0:17:51.17:0,51,1076	0/0:11,0:11:33.10:0,33,668	0/0:31,0:31:84.29:0,84,1815	0/0:16,0:16:42.04:0,42,852	0/0:27,0:27:72.25:0,72,1568	0/0:25,0:25:75.23:0,75,1532	0/1:6,15:21:14.27:664,0,14	1/1:1,23:24:63.07:984,63,0	1/1:0,11:11:21.07:337,21,0
chr10	1485678	.	AGTAGTCT	A	6838.14	PASS	AB=0.548;AC=11;AF=0.196;AN=56;BaseQRankSum=14.451;DP=547;FS=4.528;HRun=0;HaplotypeScore=136.8875;InbreedingCoeff=0.8612;MQ=67.35;MQ0=2;MQRankSum=-14.201;QD=56.05;ReadPosRankSum=-1.376;VQSLOD=4.5181;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,8:9:24.08:504,24,0	0/0:11,0:11:33.11:0,33,1305	0/0:13,0:13:32.90:0,33,995	0/0:10,0:10:23.16:0,23,577	0/0:19,0:19:54.19:0,54,2118	0/0:18,0:18:51.17:0,51,2058	0/0:22,0:22:63.22:0,63,2462	1/1:6,29:31:78.27:2056,78,0	1/1:1,20:19:54.18:1380,54,0	0/0:28,0:28:84.28:0,84,3244	0/0:31,0:31:93.32:0,93,3725	0/0:26,0:26:78.27:0,78,3022	0/0:25,0:25:75.26:0,75,3004	0/0:15,0:15:45.15:0,45,1692	0/0:17,0:17:45.15:0,45,1789	0/0:16,0:16:42.14:0,42,1674	0/0:24,0:23:69.24:0,69,2545	0/0:23,0:23:69.24:0,69,2753	0/0:18,0:18:54.19:0,54,2182	0/0:26,0:26:78.27:0,78,3061	0/0:19,0:17:51.15:0,51,1962	0/0:13,0:13:39.13:0,39,1551	0/0:18,0:18:54.19:0,54,2160	0/0:12,0:12:36.12:0,36,1430	0/0:21,0:21:60.21:0,60,2377	0/1:4,19:22:60.99:1442,0,61	1/1:8,19:27:51.17:1298,51,0	1/1:0,7:7:6.02:158,6,0
chr10	1485809	.	AT	A	2260	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=13.202;DP=521;FS=6.897;HRun=9;HaplotypeScore=63.2285;InbreedingCoeff=0.9574;MQ=68.93;MQ0=1;MQRankSum=-4.894;QD=19.48;ReadPosRankSum=0.175;VQSLOD=3.9591;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,18:19:45.02:411,45,0	0/0:8,0:8:24.07:0,24,277	0/0:17,0:13:14.93:0,15,254	0/0:14,0:11:2.77:0,3,131	0/0:29,0:29:78.22:0,78,891	0/0:27,0:28:66:0,66,720	0/0:14,0:14:38.71:0,39,427	1/1:6,25:31:74.95:668,75,0	1/1:1,16:17:39.02:356,39,0	0/0:18,0:18:42.11:0,42,470	0/0:21,0:22:66.01:0,66,723	0/0:19,0:19:51.15:0,51,589	0/0:19,0:19:51.12:0,51,566	0/0:11,0:11:33.10:0,33,381	0/0:16,0:16:42.12:0,42,485	0/0:15,0:15:45.11:0,45,503	0/0:25,0:25:39.89:0,40,670	0/0:16,0:16:36.09:0,36,403	0/0:23,0:23:63.18:0,63,720	0/0:37,0:37:99:0,106,1186	0/0:11,0:10:33.10:0,33,381	0/0:15,0:15:39.12:0,39,450	0/0:20,0:20:54.16:0,54,623	0/0:10,0:10:27.08:0,27,312	0/0:18,0:18:48.13:0,48,544	1/1:3,13:16:17.45:324,17,0	1/1:4,20:24:54.03:494,54,0	1/1:0,9:9:21.01:192,21,0
chr10	1486514	.	CTTTCTTTTTTT	C	659.48	PASS	AB=0.940;AC=8;AF=0.143;AN=56;BaseQRankSum=7.884;DP=455;FS=26.336;HRun=0;HaplotypeScore=144.5409;InbreedingCoeff=-0.1101;MQ=57.59;MQ0=9;MQRankSum=-1.149;QD=5.00;ReadPosRankSum=-0.886;VQSLOD=1.1245;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:21,0:19:99:110,0,258	0/0:4,0:4:12.04:0,12,324	0/0:22,0:11:15.17:0,15,190	0/1:23,0:9:25.50:25,0,191	0/0:36,0:35:86.31:0,86,2407	0/0:12,0:10:29.98:0,30,857	0/0:10,0:10:15.05:0,15,776	0/1:15,0:14:58.87:101,0,59	0/1:18,0:18:99:124,0,119	0/0:26,0:25:76.30:0,76,1821	0/0:24,0:24:66.20:0,66,2304	0/0:12,0:12:27.05:0,27,941	0/0:11,0:9:27.08:0,27,1039	0/0:6,0:6:18.03:0,18,379	0/0:14,0:14:42.13:0,42,1335	0/0:19,0:18:21.59:0,22,1597	0/1:1,13:14:5.70:288,0,6	0/0:15,0:15:42.01:0,42,1300	0/0:15,0:14:41.15:0,41,1042	0/0:24,0:24:69.21:0,69,2125	0/0:12,0:12:32.95:0,33,756	0/0:13,0:13:39.06:0,39,1130	0/0:21,0:21:54.17:0,54,2142	0/0:8,0:8:11.86:0,12,579	0/0:19,0:18:54.15:0,54,1821	0/1:13,0:13:21.59:22,0,281	0/1:24,0:24:81.94:82,0,272	0/1:4,0:3:15.23:43,0,15
chr10	1487122	.	CT	C	3473.94	PASS	AB=0.560;AC=11;AF=0.196;AN=56;BaseQRankSum=15.727;DP=580;FS=6.151;HRun=7;HaplotypeScore=73.1071;InbreedingCoeff=0.9336;MQ=63.00;MQ0=5;MQRankSum=-1.187;QD=25.54;ReadPosRankSum=1.006;VQSLOD=4.3795;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,37:39:99:1009,99,0	0/0:10,0:10:30.08:0,30,364	0/0:16,0:8:24.07:0,24,292	0/0:16,0:10:23.91:0,24,252	0/0:29,0:29:72.18:0,72,860	0/0:26,0:26:75.23:0,75,931	0/0:24,0:23:63.20:0,63,791	1/1:2,19:20:57.12:581,57,0	1/1:0,20:20:57.13:581,57,0	0/0:17,0:17:45.06:0,45,517	0/0:14,0:14:42.13:0,42,525	0/0:21,0:21:60.18:0,60,741	0/0:9,0:9:24.07:0,24,290	0/0:16,0:16:45.14:0,45,563	0/0:20,0:20:57.17:0,57,704	0/0:21,0:21:54.17:0,54,679	0/0:32,0:32:87.28:0,87,1094	0/0:22,0:22:63.20:0,63,793	0/0:23,0:23:54.17:0,54,679	0/0:28,0:28:75.23:0,75,932	0/0:29,0:29:72.23:0,72,903	0/0:22,0:22:60.19:0,60,754	0/0:18,0:18:51.15:0,51,626	0/0:11,0:11:33.11:0,33,415	0/0:20,0:20:51.15:0,51,629	0/1:3,11:14:1.52:294,0,2	1/1:0,29:29:75.17:764,75,0	1/1:1,12:13:24.05:245,24,0
chr10	1487778	.	CA	C	1541.04	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.560;DP=762;FS=4.899;HRun=1;HaplotypeScore=72.4080;InbreedingCoeff=0.9996;MQ=80.87;MQ0=0;MQRankSum=-1.315;QD=37.59;ReadPosRankSum=1.370;VQSLOD=4.3320;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,117,1760	0/0:12,0:12:36.10:0,36,549	0/0:24,0:24:66.63:0,67,895	0/0:28,0:28:78.12:0,78,1102	0/0:23,0:23:69.22:0,69,1074	0/0:19,0:19:57.19:0,57,911	0/0:47,0:47:99:0,141,2227	0/0:25,0:24:75.23:0,75,1138	0/0:35,0:35:99:0,105,1651	0/0:22,0:22:66.17:0,66,986	0/0:13,0:13:39.12:0,39,600	0/0:28,0:28:84.27:0,84,1318	0/0:25,0:25:75.23:0,75,1150	0/0:33,0:33:99:0,99,1556	0/0:39,0:39:99:0,117,1870	0/0:35,0:35:99:0,105,1655	1/1:0,41:41:99:1636,117,0	0/0:22,0:22:60.20:0,60,959	0/0:27,0:27:78.27:0,78,1245	0/0:18,0:18:54.17:0,54,808	0/0:45,0:45:99:0,132,2059	0/0:17,0:17:51.16:0,51,789	0/0:14,0:14:42.14:0,42,671	0/0:38,0:38:99:0,114,1720	0/0:24,0:24:72.25:0,72,1149	0/0:25,0:25:75.25:0,75,1178	0/0:30,0:29:90.28:0,90,1381	0/0:13,0:13:36.12:0,36,575
chr10	1489186	.	T	TA	74.88	PASS	AB=0.804;AC=2;AF=0.036;AN=56;BaseQRankSum=1.194;DP=452;FS=0.000;HRun=0;HaplotypeScore=94.4131;InbreedingCoeff=-0.0288;MQ=61.58;MQ0=6;MQRankSum=-2.584;QD=2.20;ReadPosRankSum=0.015;VQSLOD=2.1287;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:28.48:0,28,201	0/0:9,0:9:27.09:0,27,378	0/0:26,0:13:28.83:0,29,446	0/0:26,0:17:32.52:0,33,387	0/0:20,0:19:49.41:0,49,674	0/0:18,0:18:51.15:0,51,681	0/0:20,0:20:60.19:0,60,823	0/0:21,0:21:42.60:0,43,567	0/0:11,0:11:20.68:0,21,132	0/0:22,0:22:58.90:0,59,786	0/0:18,0:18:48.16:0,48,671	0/0:12,0:12:30.10:0,30,410	0/0:9,0:9:27.09:0,27,378	0/0:15,0:15:34.62:0,35,445	0/0:10,0:10:24.08:0,24,336	0/0:9,0:9:24.07:0,24,321	0/1:5,9:11:21.48:149,0,21	0/0:16,0:15:33.03:0,33,440	0/0:28,0:27:78.73:0,79,1083	0/0:14,0:14:36.03:0,36,484	0/0:8,0:8:24.08:0,24,335	0/0:11,0:11:26.82:0,27,348	0/0:18,0:18:48.16:0,48,666	0/0:14,0:14:33.07:0,33,439	0/0:11,0:11:30.09:0,30,404	0/0:26,0:26:65.75:0,66,672	0/1:20,0:20:4.09:4,0,75	0/0:5,0:5:5.93:0,6,39
chr10	1489190	.	CTTTTCTTTTCTTTTTTT	C	6337.30	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=11.185;DP=479;FS=0.000;HRun=0;HaplotypeScore=203.0782;InbreedingCoeff=0.9737;MQ=60.04;MQ0=7;MQRankSum=-3.610;QD=59.79;ReadPosRankSum=3.602;VQSLOD=3.9333;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,20:21:36.04:1463,36,0	0/0:9,0:9:27.09:0,27,1652	0/0:25,0:12:29.77:0,30,566	0/0:25,0:15:26.22:0,26,488	0/0:23,0:21:54.13:0,54,2819	0/0:17,0:17:51.17:0,51,2798	0/0:21,0:20:45.11:0,45,2281	1/1:1,20:21:42.56:791,43,0	1/1:0,11:11:21.07:1002,21,0	0/0:22,0:22:63.20:0,63,3136	0/0:19,0:19:50.63:0,51,2630	0/0:13,0:13:33.11:0,33,1762	0/0:11,0:11:30.07:0,30,1330	0/0:14,0:14:39.13:0,39,1980	0/0:18,0:18:45.13:0,45,2161	0/0:10,0:10:24.07:0,24,1086	0/0:16,0:14:23.40:0,23,724	0/0:17,0:16:36.09:0,36,1525	0/0:30,0:29:75.19:0,75,2841	0/0:15,0:15:36.11:0,36,1781	0/0:8,0:8:24.05:0,24,1428	0/0:12,0:12:33.10:0,33,1397	0/0:21,0:21:63.22:0,63,3631	0/0:15,0:15:39.08:0,39,2300	0/0:11,0:11:33.10:0,33,1678	1/1:1,24:27:63.06:1938,63,0	1/1:0,21:21:18.06:858,18,0	1/1:0,5:5:6.02:286,6,0
chr10	1489716	.	T	TG	638.66	PASS	AB=1.000;AC=9;AF=0.300;AN=30;BaseQRankSum=4.975;DP=84;FS=2.460;HRun=0;HaplotypeScore=39.5797;InbreedingCoeff=0.6238;MQ=78.70;MQ0=4;MQRankSum=-4.613;QD=16.38;ReadPosRankSum=-0.412;VQSLOD=4.5621;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:3,0:1:3.01:0,3,30	0/1:15,0:6:0.93:4,0,1	./.	0/0:5,0:5:8.70:0,9,95	0/0:1,0:1:2.99:0,3,23	1/1:8,0:8:24.02:282,24,0	./.	0/0:2,0:2:6.02:0,6,83	./.	0/0:2,0:2:6.02:0,6,84	./.	./.	./.	./.	0/0:12,0:11:12.03:0,12,151	0/0:8,0:8:20.94:0,21,246	./.	./.	0/0:2,0:2:3.01:0,3,34	0/0:1,0:1:3.01:0,3,42	./.	./.	0/0:4,0:4:12.04:0,12,168	1/1:6,0:5:15.05:221,15,0	1/1:4,3:6:14.71:172,15,0	1/1:1,2:3:8.86:81,9,0
chr10	1489878	.	A	AAAG	429.28	PASS	AB=0.571;AC=9;AF=0.167;AN=54;BaseQRankSum=5.011;DP=289;FS=1.298;HRun=0;HaplotypeScore=54.5312;InbreedingCoeff=0.7285;MQ=85.35;MQ0=0;MQRankSum=-5.375;QD=30.66;ReadPosRankSum=0.259;VQSLOD=3.7050;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	0/0:3,0:3:8.96:0,9,130	0/0:18,0:17:44.82:0,45,733	0/0:17,0:16:36.10:0,36,597	0/0:9,0:9:27.08:0,27,474	0/0:16,0:16:48.16:0,48,893	0/0:15,0:15:45.15:0,45,839	1/1:1,0:1:3:28,3,0	1/1:1,4:5:14.88:193,15,0	0/0:15,0:15:45.15:0,45,839	0/0:15,0:15:45.15:0,45,839	0/0:8,0:8:24.08:0,24,442	0/0:12,0:12:30.10:0,30,559	0/0:12,0:12:36.12:0,36,670	0/0:8,0:8:24.07:0,24,410	0/0:14,0:14:42.13:0,42,752	0/0:14,0:14:42.12:0,42,750	0/0:15,0:15:36.12:0,36,668	0/0:20,0:20:57.17:0,57,975	0/0:21,0:21:63.21:0,63,1133	0/0:13,0:13:39.13:0,39,727	0/0:8,0:8:24.08:0,24,447	0/0:6,0:6:18.06:0,18,328	0/0:6,0:6:18.06:0,18,336	0/0:10,0:10:30.10:0,30,559	0/1:1,3:4:43.90:134,0,44	1/1:0,2:2:6.02:89,6,0	1/1:2,0:2:6.02:125,6,0
chr10	1489883	.	C	CAAAAACAAAAGAG	8627.59	PASS	AB=0.857;AC=11;AF=0.196;AN=56;BaseQRankSum=10.037;DP=366;FS=8.052;HRun=0;HaplotypeScore=149.8809;InbreedingCoeff=0.8674;MQ=78.99;MQ0=0;MQRankSum=-11.188;QD=128.77;ReadPosRankSum=-0.080;VQSLOD=4.6872;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,0:7:18.06:771,18,0	0/0:3,0:3:9.03:0,9,347	0/0:22,0:21:60.10:0,60,1691	0/0:17,0:16:36.89:0,37,1431	0/0:12,0:12:33.09:0,33,1182	0/0:15,0:15:45.14:0,45,1696	0/0:17,0:17:48.14:0,48,1701	1/1:13,0:13:39.12:1428,39,0	1/1:10,4:14:42.14:2127,42,0	0/0:21,0:21:57.16:0,57,2038	0/0:17,0:17:48.16:0,48,1945	0/0:8,0:8:21.07:0,21,874	0/0:14,0:14:39.13:0,39,1534	0/0:11,0:11:33.11:0,33,1373	0/0:7,0:7:21.07:0,21,867	0/0:15,0:15:45.13:0,45,1667	0/0:14,0:14:42.14:0,42,1730	0/0:15,0:15:36.12:0,36,1472	0/0:20,0:20:60.21:0,60,2373	0/0:22,0:22:63.22:0,63,2531	0/0:14,0:14:42.14:0,42,1653	0/0:8,0:8:24.08:0,24,999	0/0:7,0:7:21.06:0,21,735	0/0:7,0:7:21.07:0,21,820	0/0:13,0:13:36.10:0,36,1319	0/1:15,3:18:73.68:2284,0,74	1/1:7,2:9:27.09:1229,27,0	1/1:6,0:6:18.06:789,18,0
chr10	1491129	.	TTA	T	5031.45	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=13.138;DP=533;FS=1.606;HRun=0;HaplotypeScore=75.9599;InbreedingCoeff=0.9962;MQ=83.43;MQ0=0;MQRankSum=-3.057;QD=31.84;ReadPosRankSum=4.207;VQSLOD=7.0069;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,34:35:96.30:1348,96,0	0/0:8,0:8:24.06:0,24,372	0/0:19,0:21:39.65:0,40,591	0/0:20,0:19:44.35:0,44,576	0/0:23,0:23:66.12:0,66,1126	0/0:18,0:18:54.06:0,54,919	0/0:16,0:16:48.14:0,48,823	1/1:0,30:30:89.43:1152,89,0	1/1:0,6:6:15.05:214,15,0	0/0:20,0:20:58.04:0,58,968	0/0:19,0:19:53.75:0,54,860	0/0:27,0:27:72.24:0,72,1286	0/0:12,0:12:36.09:0,36,603	0/0:21,0:21:63.18:0,63,1080	0/0:17,0:17:51.04:0,51,749	0/0:17,0:17:51.11:0,51,797	1/1:26,0:26:46.25:133,46,0	0/0:12,0:12:36.12:0,36,627	0/0:23,0:23:69.22:0,69,1211	0/0:25,0:25:75.15:0,75,1250	0/0:15,0:15:23.85:0,24,554	0/0:14,0:14:39.12:0,39,668	0/0:13,0:13:39.13:0,39,703	0/0:21,0:21:63.17:0,63,1014	0/0:13,0:13:39.05:0,39,654	1/1:0,21:21:63.17:859,63,0	1/1:0,24:24:60.20:854,60,0	1/1:0,16:16:33.11:471,33,0
chr10	1491130	.	TA	T	2712.36	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=14.545;DP=532;FS=1.631;HRun=2;HaplotypeScore=72.2162;InbreedingCoeff=0.9952;MQ=82.82;MQ0=0;MQRankSum=-0.417;QD=17.17;ReadPosRankSum=4.402;VQSLOD=3.9427;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:35,0:35:93.49:535,93,0	0/0:7,0:7:21.05:0,21,257	0/0:20,0:20:32.35:0,32,452	0/0:19,0:18:22.27:0,22,365	0/0:22,0:22:63.11:0,63,822	0/0:19,0:19:54.40:0,54,673	0/0:16,0:16:48.13:0,48,621	1/1:30,0:30:81.96:498,82,0	1/1:6,0:6:14.62:84,15,0	0/0:21,0:21:60.09:0,60,727	0/0:19,0:19:53.68:0,54,596	0/0:26,0:26:72.16:0,72,942	0/0:12,0:12:33.09:0,33,432	0/0:22,0:22:63.11:0,63,773	0/0:18,0:18:54.03:0,54,617	0/0:15,0:15:45.11:0,45,566	1/1:0,26:26:72.23:930,72,0	0/0:12,0:12:33.06:0,33,414	0/0:24,0:24:69.20:0,69,894	0/0:26,0:26:74.99:0,75,910	0/0:14,0:14:42.05:0,42,461	0/0:14,0:14:36.10:0,36,462	0/0:13,0:13:36.12:0,36,491	0/0:22,0:22:60.09:0,60,714	0/0:13,0:13:39.02:0,39,462	1/1:21,0:21:58.53:346,59,0	1/1:24,0:24:58.40:333,58,0	1/1:16,0:16:32.15:184,32,0
chr10	1491613	.	C	CTAT	918.58	PASS	AB=0.875;AC=23;AF=0.676;AN=34;BaseQRankSum=-2.928;DP=243;FS=1.565;HRun=0;HaplotypeScore=40.0567;InbreedingCoeff=0.3801;MQ=67.37;MQ0=3;MQRankSum=1.054;QD=8.20;ReadPosRankSum=-0.351;VQSLOD=2.3352;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:13:12.01:133,12,0	./.	./.	./.	0/0:6,0:6:3.01:0,3,39	1/1:3,0:6:3.01:35,3,0	./.	./.	0/0:7,0:7:2.98:0,3,21	1/1:5,4:9:11.71:168,12,0	1/1:5,0:5:2.97:20,3,0	1/1:4,0:4:3.01:36,3,0	1/1:12,0:12:3.01:56,3,0	1/1:5,0:5:5.95:46,6,0	0/1:6,0:7:9.97:10,0,35	./.	0/0:16,0:16:5.97:0,6,43	1/1:15,13:28:18.06:339,18,0	1/1:7,2:9:6.02:113,6,0	./.	1/1:9,0:8:3:27,3,0	./.	./.	./.	1/1:5,0:5:3.01:56,3,0	./.	0/0:4,0:8:2.98:0,3,21	0/0:12,0:19:5.95:0,6,42
chr10	1491799	.	CCACT	C	5994.88	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=11.135;DP=386;FS=4.153;HRun=0;HaplotypeScore=63.6474;InbreedingCoeff=0.9743;MQ=70.83;MQ0=1;MQRankSum=-3.246;QD=45.07;ReadPosRankSum=4.272;VQSLOD=5.1955;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,42:44:99:2071,111,0	0/0:4,0:4:12.04:0,12,320	0/0:19,0:18:51.01:0,51,1213	0/0:18,0:15:42.14:0,42,1037	0/0:7,0:7:18.06:0,18,480	0/0:11,0:11:30.08:0,30,743	0/0:17,0:17:48.15:0,48,1223	1/1:6,17:20:45.14:766,45,0	1/1:0,11:11:24.08:448,24,0	0/0:11,0:11:30.10:0,30,798	0/0:4,0:4:12.04:0,12,320	0/0:13,0:13:39.13:0,39,1038	0/0:6,0:6:18.06:0,18,480	0/0:15,0:15:45.15:0,45,1198	0/0:11,0:11:33.11:0,33,857	0/0:9,0:9:24.08:0,24,640	1/1:2,23:25:66.23:1231,66,0	0/0:20,0:20:51.11:0,51,1205	0/0:12,0:12:33.11:0,33,841	0/0:7,0:7:18.06:0,18,452	0/0:33,0:33:87.30:0,87,2277	0/0:8,0:8:18.06:0,18,478	0/0:5,0:5:12.02:0,12,264	0/0:15,0:15:42.13:0,42,1064	0/0:8,0:8:24.08:0,24,639	1/1:0,9:9:24.07:416,24,0	1/1:1,7:8:18.06:336,18,0	1/1:1,12:13:39.13:726,39,0
chr10	1492175	.	TGCCTAG	T	334.86	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.260;DP=318;FS=3.702;HRun=0;HaplotypeScore=68.6643;InbreedingCoeff=0.5265;MQ=80.37;MQ0=0;MQRankSum=-4.132;QD=30.44;ReadPosRankSum=-0.003;VQSLOD=3.1482;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:48.15:0,48,1173	0/0:3,0:3:9.03:0,9,321	0/0:10,0:10:18.04:0,18,486	0/0:6,0:6:12.04:0,12,367	0/0:3,0:3:9.03:0,9,320	0/0:4,0:4:12.04:0,12,393	0/0:23,0:23:66.23:0,66,2332	0/0:10,0:10:30.10:0,30,787	0/0:5,0:5:15.04:0,15,359	0/0:9,0:9:21.06:0,21,559	0/0:2,0:2:2.74:0,3,107	0/0:16,0:16:42.14:0,42,1418	0/0:5,0:5:15.05:0,15,530	0/0:9,0:9:27.08:0,27,803	0/0:11,0:11:33.11:0,33,1142	0/0:7,0:7:15.05:0,15,533	1/1:3,8:11:18.06:425,18,0	0/0:28,0:28:78.27:0,78,2755	0/0:11,0:11:27.09:0,27,768	0/0:2,0:2:3.01:0,3,107	0/0:71,0:71:99:0,187,6407	0/0:4,0:4:12.03:0,12,346	0/0:2,0:2:6.02:0,6,156	0/0:28,0:28:84.29:0,84,2987	0/0:4,0:4:12.04:0,12,428	0/0:7,0:7:21.06:0,21,538	0/0:5,0:5:15.05:0,15,413	0/0:4,0:4:12.04:0,12,334
chr10	1492703	.	G	GTTTTTGT	6980.12	PASS	AB=0.771;AC=10;AF=0.185;AN=54;BaseQRankSum=0.400;DP=564;FS=12.630;HRun=0;HaplotypeScore=130.2791;InbreedingCoeff=0.7538;MQ=67.52;MQ0=2;MQRankSum=-6.514;QD=41.80;ReadPosRankSum=-0.085;VQSLOD=4.1664;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,17:22:28.91:897,29,0	0/0:14,0:14:42.13:0,42,965	0/0:24,0:17:26.47:0,26,356	0/1:31,0:19:22.89:23,0,358	0/0:33,0:33:93.16:0,93,2053	0/0:15,0:15:36.09:0,36,760	0/0:18,0:18:45.12:0,45,984	1/1:3,23:30:81.20:1735,81,0	1/1:3,13:17:24.07:840,24,0	0/0:29,0:29:84.24:0,84,1720	0/0:16,0:15:42.13:0,42,877	0/0:16,0:16:45.12:0,45,941	0/0:21,0:21:58.32:0,58,1063	0/0:13,0:13:39.07:0,39,780	0/0:23,0:23:69.22:0,69,1494	0/0:23,0:23:60.08:0,60,1259	0/0:13,0:13:35.54:0,36,705	0/0:16,0:16:39.98:0,40,910	0/0:11,0:11:30.05:0,30,471	0/0:23,0:23:63.18:0,63,1340	0/0:17,0:17:48.14:0,48,1087	0/0:26,0:26:69.18:0,69,1463	0/0:13,0:13:36.05:0,36,596	0/0:12,0:12:30.09:0,30,654	0/0:20,0:20:54.09:0,54,927	0/1:4,17:26:83.43:1619,0,83	1/1:1,35:41:50.86:1865,51,0	./.
chr10	1492925	.	GATAGTTTCAGGT	G	6684.77	PASS	AB=0.585;AC=11;AF=0.196;AN=56;BaseQRankSum=12.622;DP=588;FS=5.332;HRun=0;HaplotypeScore=201.8732;InbreedingCoeff=0.8838;MQ=89.31;MQ0=0;MQRankSum=-12.054;QD=67.52;ReadPosRankSum=0.928;VQSLOD=4.4633;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,15:17:33.11:978,33,0	0/0:7,0:7:18.06:0,18,1051	0/0:23,0:23:57.19:0,57,2815	0/0:28,0:28:78.27:0,78,3899	0/0:40,0:40:99:0,102,5745	0/0:24,0:24:72.25:0,72,3741	0/0:17,0:17:39.13:0,39,2230	1/1:8,6:14:20.99:502,21,0	1/1:2,13:15:39.13:1410,39,0	0/0:16,0:17:39.13:0,39,2091	0/0:21,0:21:54.16:0,54,2551	0/0:27,0:27:72.25:0,72,4198	0/0:20,0:20:54.19:0,54,3239	0/0:18,0:18:48.14:0,48,2563	0/0:17,0:17:51.18:0,51,2910	0/0:25,0:25:66.23:0,66,3904	0/0:29,0:29:75.26:0,75,4425	0/0:10,0:10:30.10:0,30,1617	0/0:29,0:29:54.18:0,54,2576	0/0:27,0:27:72.23:0,72,3909	0/0:32,0:32:87.28:0,87,4821	0/0:23,0:23:54.19:0,54,3027	0/0:15,0:14:39.13:0,39,2210	0/0:25,0:25:66.23:0,66,3864	0/0:15,0:15:36.11:0,36,1853	0/1:7,17:24:99:1626,0,332	1/1:5,14:19:30.03:1084,30,0	1/1:0,10:10:30.10:1085,30,0
chr10	1493045	.	TTGTGTGTGTGTGTGTGTGTGTGTG	T	3209.24	PASS	AB=0.818;AC=12;AF=0.214;AN=56;BaseQRankSum=8.311;DP=571;FS=3.258;HRun=0;HaplotypeScore=315.8441;InbreedingCoeff=0.7099;MQ=74.17;MQ0=4;MQRankSum=-5.493;QD=21.11;ReadPosRankSum=0.148;VQSLOD=2.0118;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:27,6:31:9.78:1255,10,0	0/0:7,0:7:12.03:0,12,1023	0/0:28,0:25:21.07:0,21,705	0/1:30,0:26:30.10:30,0,344	0/0:23,0:23:33.09:0,33,2165	0/0:24,0:26:37.94:0,38,3387	0/0:22,0:22:54.17:0,54,3808	1/1:12,11:21:29.73:272,30,0	1/1:8,0:15:9.03:364,9,0	0/0:15,0:15:42.14:0,42,2945	0/0:9,0:13:21.05:0,21,1672	0/0:21,0:21:51.16:0,51,3745	0/0:18,0:19:42.14:0,42,3026	0/0:20,0:20:44.48:0,44,2592	0/0:13,0:17:36.12:0,36,3072	0/0:18,0:20:40.02:0,40,3500	0/0:10,0:23:33.49:0,33,912	0/0:17,0:17:39.13:0,39,3333	0/0:22,0:22:28.64:0,29,1513	0/0:14,0:16:24.08:0,24,2082	0/0:43,0:43:75.19:0,75,6504	0/0:16,0:17:24.08:0,24,1643	0/0:13,0:14:27.09:0,27,2441	0/0:19,0:20:42.62:0,43,3926	0/0:15,0:15:36:0,36,3026	0/1:9,12:21:99:332,0,175	1/1:6,15:21:15.52:935,16,0	1/1:0,9:9:3.01:189,3,0
chr10	1493185	.	TTG	T	912.57	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.003;DP=620;FS=6.990;HRun=0;HaplotypeScore=71.9811;InbreedingCoeff=0.9973;MQ=84.24;MQ0=1;MQRankSum=-4.354;QD=38.02;ReadPosRankSum=0.593;VQSLOD=5.2029;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:30:72.25:0,72,1388	0/0:8,0:8:24.08:0,24,464	0/0:19,0:19:54.18:0,54,998	0/0:21,0:21:63.19:0,63,1181	0/0:31,0:31:87.30:0,87,1670	0/0:27,0:27:78.27:0,78,1506	0/0:27,0:27:81.28:0,81,1553	0/0:35,0:35:99:0,105,2020	0/0:25,0:25:63.22:0,63,1216	0/0:18,0:18:51.17:0,51,955	0/0:19,0:19:57.20:0,57,1101	0/0:21,0:21:63.20:0,63,1173	0/0:21,0:21:57.20:0,57,1086	0/0:16,0:16:48.15:0,48,875	0/0:10,0:10:30.10:0,30,580	0/0:22,0:22:66.23:0,66,1274	1/1:3,21:24:69.17:1007,69,0	0/0:22,0:22:57.13:0,57,1024	0/0:24,0:24:69.20:0,69,1189	0/0:22,0:22:63.18:0,63,1177	0/0:27,0:27:78.27:0,78,1505	0/0:12,0:12:36.12:0,36,695	0/0:17,0:17:51.17:0,51,984	0/0:27,0:27:72.22:0,72,1323	0/0:14,0:14:42.14:0,42,800	0/0:23,0:23:69.24:0,69,1321	0/0:35,0:35:96.31:0,96,1803	0/0:22,0:22:66.23:0,66,1272
chr10	1493260	.	GT	G	165.48	PASS	AB=0.842;AC=4;AF=0.071;AN=56;BaseQRankSum=4.220;DP=508;FS=1.677;HRun=12;HaplotypeScore=61.4181;InbreedingCoeff=0.4543;MQ=71.34;MQ0=3;MQRankSum=0.136;QD=5.34;ReadPosRankSum=-1.271;VQSLOD=1.4638;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:17:38.84:0,39,209	0/1:2,1:3:14.22:14,0,52	0/1:13,1:11:18.63:33,0,19	0/0:17,1:12:12.43:0,12,100	0/0:30,1:33:56.71:0,57,728	0/0:17,0:17:27.04:0,27,268	0/0:16,1:17:18.85:0,19,372	0/0:28,2:31:25.71:0,26,594	0/0:7,0:16:37.09:0,37,192	0/0:24,2:26:33.03:0,33,497	0/0:10,0:11:29.89:0,30,288	0/0:13,0:14:35.89:0,36,342	0/0:12,0:12:36.04:0,36,351	0/0:10,0:10:21.51:0,22,214	0/0:20,0:20:42.05:0,42,408	0/0:21,1:22:36.87:0,37,548	1/1:3,11:14:29.86:232,30,0	0/0:19,0:19:47.83:0,48,445	0/0:15,0:15:42.08:0,42,426	0/0:29,1:31:53:0,53,695	0/0:8,0:8:15.03:0,15,152	0/0:11,0:13:35.87:0,36,338	0/0:16,2:18:24.84:0,25,422	0/0:12,0:12:23.99:0,24,226	0/0:24,0:24:47.19:0,47,512	0/0:27,1:28:32.35:0,32,602	0/0:22,0:22:45.09:0,45,456	0/0:19,1:21:27.68:0,28,433
chr10	1493301	.	TA	T	2887.96	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=9.992;DP=495;FS=5.765;HRun=8;HaplotypeScore=56.6588;InbreedingCoeff=0.9629;MQ=73.64;MQ0=3;MQRankSum=-1.542;QD=20.78;ReadPosRankSum=0.061;VQSLOD=3.4364;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,8:11:24.03:231,24,0	0/0:4,0:4:8.98:0,9,80	0/0:21,0:16:38.24:0,38,388	0/0:20,0:13:21.06:0,21,198	0/0:28,0:28:63.17:0,63,741	0/0:18,0:18:51.16:0,51,616	0/0:17,0:17:30.08:0,30,351	1/1:2,19:21:57.01:528,57,0	1/1:3,12:15:42.06:400,42,0	0/0:25,0:25:66.20:0,66,789	0/0:21,0:21:63.18:0,63,751	0/0:16,0:16:42.11:0,42,487	0/0:16,0:16:42.13:0,42,506	0/0:7,0:7:21.06:0,21,254	0/0:19,0:19:42.11:0,42,488	0/0:21,0:21:60.17:0,60,713	1/1:4,24:27:60.09:579,60,0	0/0:18,0:18:54.16:0,54,640	0/0:19,0:19:42.13:0,42,507	0/0:33,0:33:83.62:0,84,984	0/0:3,0:3:6.02:0,6,72	0/0:13,0:13:39.12:0,39,471	0/0:15,0:15:33.10:0,33,399	0/0:4,0:4:12.04:0,12,145	0/0:18,0:18:51.16:0,51,616	1/1:3,26:29:41.86:681,42,0	1/1:4,20:24:45.07:434,45,0	1/1:2,9:11:24.04:232,24,0
chr10	1495166	.	CT	C	901.95	PASS	AB=0.867;AC=3;AF=0.054;AN=56;BaseQRankSum=7.155;DP=546;FS=10.057;HRun=4;HaplotypeScore=51.9949;InbreedingCoeff=0.6813;MQ=83.65;MQ0=0;MQRankSum=-1.152;QD=21.48;ReadPosRankSum=-4.816;VQSLOD=1.1438;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:63.21:0,63,881	0/0:7,0:7:21.07:0,21,294	0/0:18,0:19:22.77:0,23,443	0/1:11,2:13:7.64:8,0,370	0/0:20,0:20:60.20:0,60,837	0/0:22,0:22:66.15:0,66,893	0/0:18,0:18:54.17:0,54,739	1/1:1,28:29:84.24:995,84,0	0/0:15,0:15:45.14:0,45,615	0/0:15,0:15:45.15:0,45,629	0/0:22,0:22:66.20:0,66,891	0/0:15,0:15:45.15:0,45,630	0/0:22,0:22:57.19:0,57,798	0/0:21,0:21:63.20:0,63,865	0/0:25,0:25:72.23:0,72,990	0/0:15,0:15:45.15:0,45,630	0/0:25,0:25:75.23:0,75,1017	0/0:22,0:22:57.19:0,57,798	0/0:17,0:17:48.05:0,48,615	0/0:26,0:26:78.26:0,78,1092	0/0:20,0:20:60.19:0,60,821	0/0:12,0:12:33.11:0,33,462	0/0:27,0:27:78.25:0,78,1075	0/0:13,0:13:39.13:0,39,546	0/0:19,0:19:54.18:0,54,756	0/0:29,0:29:84.28:0,84,1175	0/0:20,0:20:60.20:0,60,828	0/0:17,0:17:45.15:0,45,626
chr10	1496483	.	A	AT	3161.97	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-4.499;DP=687;FS=0.439;HRun=3;HaplotypeScore=76.2756;InbreedingCoeff=0.9955;MQ=73.77;MQ0=0;MQRankSum=-1.169;QD=36.77;ReadPosRankSum=0.831;VQSLOD=4.0890;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:90.24:0,90,1061	0/0:12,0:12:36.10:0,36,421	0/0:31,0:30:84:0,84,940	0/0:35,0:32:56.54:0,57,645	0/0:26,0:26:72.22:0,72,862	0/0:17,0:17:51.16:0,51,612	0/0:29,0:29:81.25:0,81,969	0/0:24,0:24:66.20:0,66,792	0/0:25,0:25:72.22:0,72,864	0/0:30,0:30:87.27:0,87,1044	0/0:37,0:37:99:0,102,1209	0/0:13,0:13:36.09:0,36,410	0/0:17,0:17:48.15:0,48,576	0/0:18,0:18:51.16:0,51,612	0/0:31,0:31:87.25:0,87,1032	0/0:25,0:25:75.23:0,75,900	1/1:1,26:27:75.22:1030,75,0	0/0:18,0:18:48.13:0,48,563	0/0:35,0:35:90.25:0,90,1059	0/0:31,0:31:84.23:0,84,984	0/0:31,0:31:87.27:0,87,1044	0/0:20,0:20:51.14:0,51,597	0/0:19,0:19:42.13:0,42,504	0/0:18,0:18:54.17:0,54,648	0/0:26,0:26:72.22:0,72,864	1/1:1,22:23:66.22:924,66,0	1/1:1,29:30:84.26:1157,84,0	1/1:1,5:6:15.05:210,15,0
chr10	1496645	.	C	CT	59.69	PASS	AB=0.919;AC=8;AF=0.143;AN=56;BaseQRankSum=-0.356;DP=534;FS=3.848;HRun=15;HaplotypeScore=87.3004;InbreedingCoeff=-0.0635;MQ=73.08;MQ0=1;MQRankSum=-0.428;QD=0.50;ReadPosRankSum=-2.779;VQSLOD=-0.7580;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:11,11:23:11.82:105,0,12	0/1:5,1:6:12.02:19,0,12	0/0:27,0:19:4.68:0,5,23	0/1:15,0:11:2.69:24,0,3	0/1:14,2:16:0.39:0,0,101	0/1:13,1:18:6.59:7,0,64	0/1:21,0:21:2.29:2,0,101	0/0:36,1:37:39.81:0,40,239	0/0:19,2:21:3.87:0,4,136	0/0:19,2:21:4.08:0,4,136	0/0:21,1:24:19.91:0,20,220	0/0:13,0:14:15.89:0,16,94	0/1:7,0:10:4.32:4,0,65	0/0:19,0:19:23.10:0,23,143	0/0:23,2:27:12.31:0,12,260	0/0:17,0:19:33.32:0,33,191	0/0:21,0:23:45.07:0,45,263	0/0:13,0:14:25.48:0,25,149	0/0:17,2:19:4.14:0,4,136	0/0:21,1:22:0.02:0,0,202	0/0:14,0:14:26.32:0,26,160	0/1:10,0:11:8.31:8,0,46	0/0:18,0:18:20.20:0,20,125	0/0:15,0:16:13.83:0,14,178	0/0:17,1:20:12.44:0,12,152	0/0:21,0:21:34.92:0,35,214	0/0:27,1:29:34.07:0,34,258	0/0:6,0:7:10.72:0,11,60
chr10	1498968	.	T	TG	1495.77	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-3.207;DP=594;FS=1.091;HRun=9;HaplotypeScore=71.6775;InbreedingCoeff=0.9355;MQ=79.69;MQ0=0;MQRankSum=-1.643;QD=16.62;ReadPosRankSum=1.352;VQSLOD=3.9570;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:82.21:0,82,705	0/0:7,0:7:17.99:0,18,156	0/0:23,0:23:35.97:0,36,305	0/0:17,0:15:2.48:0,2,171	0/0:21,0:21:47.93:0,48,410	0/0:24,0:24:40.17:0,40,475	0/0:28,0:29:68:0,68,578	0/0:20,0:21:35.94:0,36,312	0/0:24,0:24:62.95:0,63,538	0/0:17,0:17:32.98:0,33,286	0/0:20,0:21:53:0,53,448	0/0:20,0:20:47.65:0,48,402	0/0:19,2:22:13.83:0,14,337	0/0:19,0:20:53.01:0,53,448	0/0:30,0:30:83.01:0,83,709	0/0:30,1:31:50.78:0,51,656	1/1:9,17:26:48.13:531,48,0	0/0:6,0:6:18:0,18,156	0/0:13,0:13:32.99:0,33,287	0/0:22,0:22:56.98:0,57,494	0/0:24,0:24:47.96:0,48,416	0/0:18,0:18:47.99:0,48,416	0/0:20,0:20:47.98:0,48,417	0/0:13,0:13:35.99:0,36,312	0/0:25,0:27:58.03:0,58,480	1/1:13,16:29:22.05:459,22,0	1/1:9,17:25:17.84:407,18,0	1/1:3,6:9:24.05:257,24,0
chr10	1499748	.	T	TG	972.10	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=5.262;DP=399;FS=26.289;HRun=0;HaplotypeScore=50.6574;InbreedingCoeff=0.8099;MQ=60.40;MQ0=10;MQRankSum=3.215;QD=15.94;ReadPosRankSum=4.265;VQSLOD=2.6933;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:21:48.80:0,49,370	0/0:6,0:6:17.95:0,18,162	0/0:7,0:4:5.94:0,6,43	0/0:7,0:4:6.46:0,6,50	0/0:28,0:28:74.88:0,75,781	0/0:9,0:9:24.03:0,24,268	0/0:23,0:22:57.25:0,57,614	0/0:41,0:37:95.83:0,96,941	0/0:9,0:8:21.02:0,21,254	0/0:16,0:16:39.03:0,39,443	0/0:16,0:15:40.84:0,41,476	0/0:8,0:8:15.50:0,16,178	0/0:8,0:6:10.38:0,10,114	0/0:7,0:5:14.99:0,15,145	0/0:17,0:16:45.07:0,45,541	0/0:13,0:12:28.27:0,28,310	0/1:15,0:15:0.50:19,0,0	0/0:13,0:13:36.06:0,36,406	0/0:18,0:16:42.34:0,42,463	0/0:21,0:19:44.05:0,44,485	0/0:4,0:3:5.81:0,6,61	0/0:10,0:9:15.90:0,16,187	0/0:10,0:8:21.46:0,21,222	0/0:8,0:8:21.03:0,21,231	0/0:17,0:14:32.52:0,33,355	1/1:2,12:12:32.94:352,33,0	1/1:1,15:16:24.01:392,24,0	1/1:4,12:15:27.87:356,28,0
chr10	1500081	.	GTTCATATGGGTCCCGAGCCCC	G	1540.54	PASS	AB=0.833;AC=7;AF=0.130;AN=54;BaseQRankSum=5.384;DP=581;FS=1.226;HRun=0;HaplotypeScore=209.2239;InbreedingCoeff=0.7005;MQ=41.75;MQ0=84;MQRankSum=-4.731;QD=49.69;ReadPosRankSum=3.159;VQSLOD=2.7541;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:28:72.25:0,72,6576	0/0:16,0:16:48.16:0,48,4349	./.	0/0:15,0:1:3.01:0,3,286	0/0:26,0:25:54.19:0,54,5154	0/0:20,0:19:27.09:0,27,2643	0/0:29,0:21:27.09:0,27,2425	0/0:28,0:11:30.10:0,30,2896	0/0:25,0:20:36.12:0,36,3492	0/0:21,0:16:45.15:0,45,4346	0/0:10,0:9:21.07:0,21,1851	0/0:26,0:20:30.10:0,30,2326	0/0:23,0:20:36.10:0,36,3059	0/0:24,0:22:27.09:0,27,2474	0/0:22,0:20:36.12:0,36,3285	0/0:24,0:24:48.16:0,48,4404	1/1:4,1:1:3.01:107,3,0	0/0:24,0:22:60.21:0,60,5698	0/0:30,0:21:63.22:0,63,5965	0/0:22,0:22:60.21:0,60,5507	0/0:33,0:25:54.19:0,54,5288	0/0:21,0:21:54.19:0,54,5071	0/0:19,0:15:36.12:0,36,3545	0/0:28,0:25:60.21:0,60,5522	0/0:12,0:12:27.09:0,27,2495	0/1:4,1:3:99:166,0,593	1/1:6,4:7:12.04:699,12,0	1/1:6,5:7:12.04:699,12,0
chr10	1500139	.	C	CG	480.24	PASS	AB=0.850;AC=8;AF=0.154;AN=52;BaseQRankSum=6.388;DP=633;FS=11.608;HRun=5;HaplotypeScore=67.1715;InbreedingCoeff=0.6974;MQ=35.82;MQ0=155;MQRankSum=-5.295;QD=9.06;ReadPosRankSum=0.279;VQSLOD=0.1416;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:18:30.07:0,30,321	0/0:10,0:10:24.06:0,24,255	./.	0/1:14,0:2:0:0,0,0	0/0:31,0:28:60.15:0,60,644	0/0:28,0:13:12.03:0,12,127	0/0:24,0:13:24.06:0,24,257	./.	0/0:31,0:18:15.04:0,15,161	0/0:25,0:19:51.11:0,51,540	0/0:12,0:12:27.07:0,27,290	0/0:25,0:18:15.03:0,15,159	0/0:25,0:15:17.83:0,18,193	0/0:29,0:16:6.01:0,6,64	0/0:30,0:20:24.06:0,24,257	0/0:29,0:20:29.86:0,30,321	1/1:5,2:3:3.01:39,3,0	0/0:24,0:21:36.02:0,36,386	0/0:23,0:13:36.09:0,36,387	0/0:27,0:24:60.15:0,60,640	0/0:31,0:19:41.78:0,42,445	0/0:13,0:12:30.07:0,30,321	0/0:29,0:27:57.12:0,57,598	0/0:25,0:19:24.06:0,24,257	0/0:20,0:19:45.11:0,45,481	0/1:8,6:8:14.19:179,0,14	1/1:3,6:7:15.05:196,15,0	1/1:3,6:6:15.05:197,15,0
chr10	1502379	.	A	ACCT	353.55	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=2.110;DP=349;FS=7.012;HRun=0;HaplotypeScore=87.7208;InbreedingCoeff=0.7885;MQ=77.29;MQ0=1;MQRankSum=-4.115;QD=6.93;ReadPosRankSum=0.867;VQSLOD=1.7585;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,12:21:2.93:20,3,0	0/0:7,0:7:14.99:0,15,130	0/0:33,0:21:47.17:0,47,443	0/0:24,0:10:17.87:0,18,195	0/0:8,0:8:11.98:0,12,98	0/0:8,0:8:11.95:0,12,120	0/0:17,0:17:39.04:0,39,420	0/0:14,0:16:23.83:0,24,188	0/0:6,0:8:8.08:0,8,73	0/0:13,0:13:33.01:0,33,293	0/0:8,0:8:9:0,9,79	0/0:7,0:7:13.26:0,13,139	0/0:10,0:10:20.67:0,21,181	0/0:8,0:8:9.33:0,9,164	0/0:13,0:14:11.61:0,12,98	0/0:11,0:11:26.59:0,27,303	0/0:13,0:16:42:0,42,428	0/0:17,0:17:33.01:0,33,365	0/0:8,0:8:14.96:0,15,123	0/0:4,0:4:9:0,9,77	0/0:16,0:16:35.68:0,36,330	0/0:5,0:5:11.95:0,12,95	0/0:10,0:10:23.67:0,24,202	0/0:16,0:17:36:0,36,368	0/0:10,0:10:11.83:0,12,103	1/1:6,0:6:5.97:56,6,0	1/1:4,1:17:17.63:284,18,0	1/1:7,0:7:14.89:134,15,0
chr10	1503546	.	T	TA	303.54	PASS	AB=0.889;AC=3;AF=0.054;AN=56;BaseQRankSum=-4.114;DP=516;FS=1.950;HRun=10;HaplotypeScore=52.2442;InbreedingCoeff=0.5205;MQ=64.17;MQ0=0;MQRankSum=0.620;QD=9.49;ReadPosRankSum=0.159;VQSLOD=2.0128;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:31:73.94:0,74,597	0/0:3,0:3:8.99:0,9,74	0/0:12,0:8:7.27:0,7,95	0/0:5,0:4:2.99:0,3,25	0/0:35,0:37:87.91:0,88,694	0/0:16,0:16:38.85:0,39,304	0/0:13,0:13:23.96:0,24,197	0/0:19,0:15:35.43:0,35,278	0/0:9,1:10:19.03:0,19,209	0/0:32,0:32:80.85:0,81,657	0/0:14,0:15:40.97:0,41,322	0/0:12,0:12:32.95:0,33,270	0/0:20,0:20:55.94:0,56,441	0/0:18,0:18:41.91:0,42,339	0/0:30,0:31:82.93:0,83,669	0/0:18,0:18:47.77:0,48,374	1/1:6,18:24:17.47:391,17,0	0/0:23,0:23:50.47:0,50,393	0/0:20,1:22:14.97:0,15,318	0/0:23,1:25:23.95:0,24,384	0/0:10,0:10:26.94:0,27,216	0/1:7,1:8:11.02:11,0,124	0/0:15,0:15:29.90:0,30,240	0/0:14,0:13:32.93:0,33,268	0/0:16,0:16:38.94:0,39,320	0/0:24,0:25:61.95:0,62,498	0/0:26,0:26:70.94:0,71,569	0/0:15,0:15:35.96:0,36,296
chr10	1503753	.	T	TA	723.99	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-1.328;DP=538;FS=3.602;HRun=9;HaplotypeScore=64.0478;InbreedingCoeff=0.9804;MQ=73.26;MQ0=0;MQRankSum=-0.195;QD=18.56;ReadPosRankSum=0.795;VQSLOD=3.8916;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,32:39:75.18:819,75,0	0/0:7,0:7:17.99:0,18,156	0/0:10,0:10:18.81:0,19,176	0/0:14,0:14:29.97:0,30,258	0/0:30,0:30:74.94:0,75,647	0/0:20,0:20:50.98:0,51,441	0/0:12,0:12:32.59:0,33,270	0/0:34,0:34:86.94:0,87,746	0/0:15,0:15:44.99:0,45,391	0/0:30,0:30:83.88:0,84,712	0/0:19,0:19:44.94:0,45,383	0/0:12,0:12:32.99:0,33,286	0/0:13,0:13:38.99:0,39,339	0/0:17,0:17:41.98:0,42,365	0/0:24,0:24:62.98:0,63,547	0/0:19,0:19:50.97:0,51,438	0/0:24,0:25:73.99:0,74,622	0/0:15,0:15:35.99:0,36,312	0/0:21,0:21:53.97:0,54,465	0/0:19,0:19:29.48:0,29,410	0/0:13,0:13:35.97:0,36,308	0/0:9,0:9:23.98:0,24,205	0/0:13,0:13:32.99:0,33,284	0/0:22,0:22:50.92:0,51,435	0/0:21,0:21:34.36:0,34,439	0/0:19,0:19:53.96:0,54,460	0/0:33,0:32:89.85:0,90,759	0/0:13,0:13:29.96:0,30,252
chr10	1504048	.	C	CT	880.15	PASS	AB=0.864;AC=14;AF=0.250;AN=56;BaseQRankSum=-5.002;DP=508;FS=12.243;HRun=15;HaplotypeScore=68.5047;InbreedingCoeff=0.1824;MQ=72.24;MQ0=2;MQRankSum=-0.844;QD=4.07;ReadPosRankSum=-1.051;VQSLOD=-0.2458;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:15,22:39:9.23:251,9,0	0/1:10,1:12:10.80:11,0,102	0/0:17,0:12:10.74:0,11,74	0/1:14,0:14:9.48:9,0,38	0/1:7,2:9:16.94:17,0,27	0/1:11,3:17:43.85:44,0,76	0/0:10,0:11:9.25:0,9,109	0/0:26,0:29:40.06:0,40,237	0/0:20,0:20:32.07:0,32,196	0/0:15,0:16:13.60:0,14,77	0/0:13,0:17:6.22:0,6,113	0/0:22,0:23:20.42:0,20,216	0/1:18,0:20:0.85:1,0,92	0/0:16,0:17:0.34:0,0,98	0/0:21,0:22:19.18:0,19,112	0/1:12,2:14:18.86:19,0,120	0/0:1,0:17:24.44:0,24,71	0/0:19,0:21:23.70:0,24,124	0/1:14,6:20:65.72:94,0,66	0/0:15,0:16:25.37:0,25,148	0/0:14,0:14:23.30:0,23,142	0/0:6,0:6:8.66:0,9,54	0/0:9,0:11:21.67:0,22,118	0/0:17,0:19:27.39:0,27,155	0/0:16,0:16:16.22:0,16,94	0/1:15,8:23:8.49:137,0,8	1/1:13,24:38:7.04:299,7,0	1/1:5,4:9:10.02:155,10,0
chr10	1505576	.	GGCTTTGTTCT	G	4809.09	PASS	AB=0.600;AC=7;AF=0.125;AN=56;BaseQRankSum=10.442;DP=732;FS=0.527;HRun=0;HaplotypeScore=230.9744;InbreedingCoeff=0.8156;MQ=71.97;MQ0=0;MQRankSum=-7.727;QD=57.25;ReadPosRankSum=1.331;VQSLOD=4.4033;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:57.20:0,57,2765	0/0:10,0:10:27.02:0,27,1246	0/0:18,0:17:39.13:0,39,1586	0/0:23,0:22:48.52:0,49,1884	0/0:25,0:25:63.13:0,63,2918	0/0:29,0:29:78.27:0,78,3549	0/0:22,0:22:60.21:0,60,2746	0/0:37,0:37:78.24:0,78,3342	0/0:27,0:27:63.16:0,63,3009	0/0:31,0:31:69.24:0,69,3440	0/0:33,0:33:72.25:0,72,3526	0/0:27,0:27:78.27:0,78,3744	0/0:37,0:37:99:0,108,5250	0/0:36,0:36:90.31:0,90,4382	0/0:39,0:39:99:0,117,5806	0/0:35,0:35:93.32:0,93,4392	1/1:4,13:17:30.10:916,30,0	0/0:17,0:17:42.10:0,42,1898	0/0:21,0:21:39.13:0,39,1755	0/0:30,0:30:75.26:0,75,3701	0/0:28,0:28:81.28:0,81,3801	0/0:24,0:24:60.20:0,60,2619	0/0:26,0:26:75.26:0,75,3729	0/0:23,0:23:60.21:0,60,2984	0/0:28,0:28:69.24:0,69,3213	0/1:9,18:27:96.62:1492,0,97	1/1:9,22:31:69.24:2119,69,0	1/1:3,6:9:9.03:282,9,0
chr10	1505766	.	TAGG	T	1204.06	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.043;DP=707;FS=6.339;HRun=0;HaplotypeScore=107.9150;InbreedingCoeff=0.9993;MQ=58.05;MQ0=1;MQRankSum=-0.885;QD=37.63;ReadPosRankSum=1.962;VQSLOD=4.7065;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,31:32:78.27:1299,78,0	0/0:11,0:11:33.11:0,33,721	0/0:34,0:31:85.91:0,86,1866	0/0:18,0:18:54.11:0,54,1089	0/0:22,0:22:57.20:0,57,1287	0/0:17,0:17:48.16:0,48,1087	0/0:37,0:37:99:0,103,2230	0/0:23,0:23:69.24:0,69,1564	0/0:24,0:24:72.23:0,72,1588	0/0:29,0:29:81.28:0,81,1817	0/0:15,0:15:45.15:0,45,1019	0/0:37,0:37:99:0,102,2147	0/0:28,0:28:78.27:0,78,1766	0/0:30,0:30:87.30:0,87,1926	0/0:36,0:36:99:0,102,2283	0/0:35,0:35:99:0,99,2189	0/0:33,0:33:90.27:0,90,1950	0/0:25,0:25:72.21:0,72,1547	0/0:20,0:20:54.18:0,54,1150	0/0:18,0:18:54.19:0,54,1222	0/0:42,0:42:99:0,117,2603	0/0:15,0:15:39.12:0,39,841	0/0:14,0:14:39.13:0,39,874	0/0:40,0:40:99:0,114,2581	0/0:11,0:11:33.11:0,33,747	0/0:30,0:30:87.23:0,87,1863	0/0:16,0:16:45.15:0,45,1016	0/0:15,0:15:45.11:0,45,929
chr10	1507512	.	C	CCCATCCATCCATCCAT	7051.71	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=1.206;DP=783;FS=1.325;HRun=0;HaplotypeScore=334.5222;InbreedingCoeff=0.9215;MQ=72.06;MQ0=5;MQRankSum=-7.552;QD=86.00;ReadPosRankSum=-2.982;VQSLOD=3.1976;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:39.61:0,40,1462	0/0:8,0:8:15.05:0,15,599	0/0:38,0:27:24.05:0,24,658	0/0:34,0:32:16.14:0,16,308	0/0:24,0:24:45.15:0,45,1875	0/0:28,0:28:66.23:0,66,2824	0/0:35,0:35:22.37:0,22,1205	0/0:41,0:41:48.16:0,48,1543	0/0:35,0:35:72.23:0,72,2968	0/0:29,0:29:75.24:0,75,2895	0/0:23,0:23:33.09:0,33,1232	0/0:30,0:30:66.20:0,66,2475	0/0:31,0:31:75.21:0,75,2767	0/0:31,0:31:72.25:0,72,2956	0/0:28,0:28:69.20:0,69,2419	0/0:37,0:37:96.33:0,96,3869	0/0:9,0:21:39.13:0,39,1257	0/0:21,0:21:45.11:0,45,1677	0/0:22,0:22:27:0,27,1106	0/0:23,0:24:50.62:0,51,1704	0/0:41,0:41:81.28:0,81,3212	0/0:18,0:18:39.12:0,39,1441	0/0:18,0:18:33.10:0,33,1247	0/0:25,0:25:39.12:0,39,1411	0/0:26,0:26:63.19:0,63,2365	1/1:21,4:28:25.23:2813,25,0	1/1:36,9:48:60.21:4018,60,0	1/1:6,0:6:3.01:221,3,0
chr10	1507517	.	CCA	C	68.06	PASS	AB=0.826;AC=2;AF=0.036;AN=56;BaseQRankSum=8.055;DP=795;FS=0.768;HRun=0;HaplotypeScore=119.4853;InbreedingCoeff=-0.0318;MQ=68.87;MQ0=7;MQRankSum=-3.662;QD=1.33;ReadPosRankSum=2.312;VQSLOD=1.9715;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:14,16:30:99:142,0,189	0/0:7,0:7:21.07:0,21,387	0/0:39,0:26:72.24:0,72,1213	0/0:31,0:29:82.27:0,82,1289	0/0:25,0:25:69.24:0,69,1314	0/0:31,0:31:90.31:0,90,1738	0/0:35,0:36:99:0,105,1788	0/0:39,0:39:99:0,117,2052	0/0:35,0:35:99:0,99,1859	0/0:30,0:30:90.30:0,90,1758	0/0:25,0:25:66.17:0,66,1156	0/0:31,0:31:93.30:0,93,1748	0/0:30,0:30:90.30:0,90,1731	0/0:30,0:30:90.31:0,90,1794	0/0:29,0:29:87.30:0,87,1680	0/0:42,0:42:99:0,126,2472	0/1:21,0:21:3.76:4,0,364	0/0:22,0:22:66.23:0,66,1233	0/0:28,0:26:78.27:0,78,1428	0/0:25,0:25:70.16:0,70,1370	0/0:38,0:38:99:0,111,2120	0/0:19,0:19:57.19:0,57,1065	0/0:18,0:18:54.18:0,54,995	0/0:27,0:27:75.26:0,75,1334	0/0:27,0:27:78.22:0,78,1476	0/0:27,0:27:81.28:0,81,1540	0/0:47,0:47:87.28:0,87,1521	0/0:6,0:6:18.06:0,18,332
chr10	1507520	.	TCCATCC	T	416.05	PASS	AB=0.667;AC=1;AF=0.018;AN=56;BaseQRankSum=6.741;DP=804;FS=0.000;HRun=0;HaplotypeScore=181.8044;InbreedingCoeff=-0.0186;MQ=68.70;MQ0=7;MQRankSum=-5.678;QD=13.00;ReadPosRankSum=0.590;VQSLOD=2.9495;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:16,16:32:99:491,0,219	0/0:7,0:7:21.07:0,21,669	0/0:41,0:28:84.29:0,84,2034	0/0:32,0:29:64.56:0,65,1740	0/0:26,0:26:69.24:0,69,2251	0/0:32,0:32:93.30:0,93,2980	0/0:35,0:35:99:0,102,2567	0/0:39,0:39:99:0,117,3120	0/0:33,0:33:99:0,99,3116	0/0:31,0:31:93.32:0,93,3219	0/0:26,0:26:66.23:0,66,1921	0/0:30,0:30:90.31:0,90,3047	0/0:30,0:30:90.31:0,90,3093	0/0:31,0:31:93.32:0,93,3249	0/0:31,0:31:93.32:0,93,3012	0/0:42,0:42:99:0,126,4360	0/0:21,0:21:60.61:0,61,696	0/0:21,0:21:63.22:0,63,2062	0/0:28,0:26:78.25:0,78,2278	0/0:25,0:25:74.74:0,75,2320	0/0:40,0:40:99:0,117,3693	0/0:20,0:20:60.21:0,60,1858	0/0:20,0:20:60.21:0,60,1746	0/0:26,0:26:75.21:0,75,2075	0/0:27,0:27:78.25:0,78,2570	0/0:27,0:27:81.28:0,81,2637	0/0:45,0:45:81.26:0,81,2392	0/0:6,0:6:18.06:0,18,544
chr10	1507719	.	AG	A	1183.05	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.986;DP=692;FS=21.503;HRun=3;HaplotypeScore=85.1161;InbreedingCoeff=0.9998;MQ=69.35;MQ0=0;MQRankSum=-2.715;QD=30.33;ReadPosRankSum=1.387;VQSLOD=1.9406;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,39:39:99:1278,105,0	0/0:20,0:20:57.16:0,57,781	0/0:16,0:16:42.03:0,42,523	0/0:24,0:23:59.66:0,60,748	0/0:26,0:26:72.18:0,72,955	0/0:20,0:20:57.15:0,57,763	0/0:16,0:16:48.15:0,48,671	0/0:30,0:30:84.23:0,84,1167	0/0:20,0:20:57.16:0,57,775	0/0:25,0:25:72.22:0,72,988	0/0:16,0:16:42.10:0,42,550	0/0:35,0:35:99:0,102,1445	0/0:27,0:27:69.12:0,69,905	0/0:19,0:19:57.16:0,57,761	0/0:29,0:29:84.26:0,84,1169	0/0:34,0:34:87.21:0,87,1188	0/0:29,0:29:84.08:0,84,1037	0/0:19,0:19:51.14:0,51,711	0/0:17,0:17:48.12:0,48,633	0/0:36,0:36:99:0,102,1362	0/0:28,0:28:66.20:0,66,907	0/0:15,0:15:42.13:0,42,585	0/0:25,0:25:75.24:0,75,1057	0/0:36,0:36:96.31:0,96,1361	0/0:14,0:14:42.14:0,42,603	0/0:28,0:28:84.20:0,84,1132	0/0:28,0:28:78.18:0,78,1086	0/0:21,0:21:57.19:0,57,818
chr10	1510842	.	GA	G	282.03	PASS	AB=0.895;AC=8;AF=0.143;AN=56;BaseQRankSum=2.919;DP=671;FS=2.363;HRun=15;HaplotypeScore=81.5275;InbreedingCoeff=0.0801;MQ=66.45;MQ0=4;MQRankSum=0.132;QD=1.55;ReadPosRankSum=1.141;VQSLOD=-0.6725;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:10,25:38:7:284,7,0	0/0:9,0:9:6.23:0,6,144	0/1:40,2:19:1.58:2,0,82	0/0:26,1:17:15.42:0,15,120	0/1:27,7:34:23.92:24,0,300	0/0:19,0:23:43.72:0,44,372	0/0:15,3:18:7.73:0,8,192	0/0:26,0:27:36.64:0,37,302	0/1:16,0:18:0.19:0,0,90	0/0:25,3:28:15.43:0,15,378	0/0:26,1:27:7.48:0,7,264	0/0:32,0:32:57.11:0,57,466	0/0:16,1:17:10.72:0,11,217	0/0:16,0:16:8.27:0,8,188	0/0:34,1:35:41.95:0,42,481	0/0:15,0:15:35.79:0,36,290	0/0:4,0:13:20.35:0,20,132	0/1:10,1:11:22.34:22,0,85	0/0:15,0:15:15.55:0,16,219	0/0:24,0:24:25.39:0,25,357	0/0:16,1:17:17.70:0,18,240	0/0:24,0:24:28.05:0,28,332	0/0:31,3:35:8.29:0,8,363	0/1:13,5:18:60.36:60,0,145	0/0:18,1:20:29.33:0,29,333	0/1:18,2:20:10:10,0,156	0/0:36,2:38:7.37:0,7,462	0/0:28,0:28:46.58:0,47,509
chr10	1511174	.	AT	A	1903.45	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=11.754;DP=490;FS=36.780;HRun=6;HaplotypeScore=69.4353;InbreedingCoeff=0.8972;MQ=78.84;MQ0=0;MQRankSum=-5.346;QD=21.39;ReadPosRankSum=2.894;VQSLOD=1.5840;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:57.14:0,57,729	0/0:7,0:7:18.06:0,18,237	0/0:15,0:14:13.30:0,13,289	0/1:16,0:16:3.39:3,0,251	0/0:28,0:28:57.48:0,57,910	0/0:10,0:10:30.10:0,30,395	0/0:18,0:18:54.18:0,54,710	0/0:26,0:26:72.23:0,72,934	0/0:16,0:16:46.96:0,47,597	0/0:29,0:29:75.22:0,75,967	0/0:29,0:29:81.24:0,81,1027	0/0:16,0:16:45.15:0,45,591	0/0:18,0:18:48.15:0,48,615	0/0:11,0:11:30.10:0,30,393	0/0:16,0:16:42.14:0,42,549	0/0:17,0:17:48.16:0,48,631	1/1:2,15:17:42.10:451,42,0	0/0:11,0:11:30.10:0,30,394	0/0:20,0:20:48.16:0,48,631	0/0:25,0:25:69.22:0,69,907	0/0:10,0:10:27.08:0,27,339	0/0:20,0:20:54.17:0,54,696	0/0:7,0:7:21.07:0,21,275	0/0:16,0:16:48.16:0,48,630	0/0:14,0:14:39.13:0,39,513	1/1:2,11:13:33.08:354,33,0	1/1:2,23:25:69.17:740,69,0	1/1:2,16:18:48.12:516,48,0
chr10	1511220	.	T	TA	77.13	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=6.062;DP=542;FS=0.000;HRun=0;HaplotypeScore=82.0869;InbreedingCoeff=0.6045;MQ=60.42;MQ0=19;MQRankSum=-4.732;QD=1.68;ReadPosRankSum=3.325;VQSLOD=1.6307;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:55.15:0,55,401	0/0:13,0:12:29.96:0,30,283	0/0:49,0:11:6.58:0,7,83	0/1:27,0:8:9.70:10,0,28	0/0:29,0:29:80.35:0,80,669	0/0:17,0:17:50.92:0,51,433	0/0:16,0:16:44.87:0,45,367	0/0:28,0:27:67.72:0,68,532	0/0:12,0:12:34.37:0,34,251	0/0:16,0:16:46.69:0,47,393	0/0:32,0:32:74.10:0,74,558	0/0:16,0:16:46.71:0,47,374	0/0:17,0:17:50.33:0,50,407	0/0:15,0:14:26.80:0,27,207	0/0:18,0:18:50.73:0,51,380	0/0:10,0:10:26.35:0,26,214	1/1:15,4:19:28.51:169,29,0	0/0:10,0:10:26.94:0,27,221	0/0:20,0:18:52.58:0,53,432	0/0:21,0:21:54.67:0,55,403	0/0:8,0:7:12.45:0,12,104	0/0:20,0:20:59.41:0,59,510	0/0:20,0:20:53.87:0,54,464	0/0:18,0:18:40.84:0,41,341	0/0:24,0:24:50.85:0,51,432	0/0:11,0:11:14.19:0,14,78	0/0:21,0:21:33.22:0,33,212	0/0:13,0:11:21.45:0,21,141
chr10	1511221	.	T	TA	184.12	PASS	AB=0.903;AC=5;AF=0.089;AN=56;BaseQRankSum=8.382;DP=538;FS=0.768;HRun=0;HaplotypeScore=79.3934;InbreedingCoeff=0.5099;MQ=60.38;MQ0=19;MQRankSum=-5.134;QD=2.52;ReadPosRankSum=3.445;VQSLOD=2.4526;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:55.84:0,56,404	0/0:13,0:12:29.91:0,30,276	0/0:50,0:11:10.80:0,11,100	0/1:28,0:9:2.45:2,0,64	0/0:29,0:29:80.32:0,80,662	0/0:17,0:17:50.92:0,51,431	0/0:16,0:16:44.86:0,45,365	0/0:27,0:26:65.14:0,65,502	0/0:12,0:12:34.40:0,34,252	0/0:16,0:16:47.46:0,47,408	0/0:32,0:32:74.22:0,74,560	0/0:16,0:16:45.78:0,46,365	0/0:17,0:17:50.18:0,50,400	0/0:15,0:14:26.78:0,27,203	0/0:17,0:17:49.49:0,49,378	0/0:10,0:10:26.35:0,26,215	0/0:19,0:19:7.41:0,7,64	0/0:10,0:10:26.93:0,27,218	0/0:19,0:17:49.66:0,50,415	0/0:21,0:21:57.99:0,58,432	0/0:7,0:6:15.71:0,16,109	0/0:19,0:19:56.41:0,56,480	0/0:20,0:20:53.89:0,54,467	0/0:18,0:18:40.84:0,41,338	0/0:24,0:24:50.86:0,51,433	1/1:7,3:10:6.97:59,7,0	0/1:13,8:22:4.87:142,0,5	0/1:13,0:11:1.25:88,0,1
chr10	1511227	.	T	TTATTTATTTA	4714.27	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=7.087;DP=529;FS=6.244;HRun=0;HaplotypeScore=170.5704;InbreedingCoeff=0.9455;MQ=57.67;MQ0=19;MQRankSum=-7.669;QD=74.83;ReadPosRankSum=5.898;VQSLOD=4.3573;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:57.69:0,58,626	0/0:12,0:11:27.09:0,27,637	0/0:49,0:10:17.59:0,18,223	0/0:28,0:9:4.47:0,4,135	0/0:28,0:28:74.15:0,74,1434	0/0:16,0:16:48.15:0,48,1002	0/0:16,0:16:44.15:0,44,766	0/0:25,0:24:61:0,61,1027	0/0:12,0:12:34.44:0,34,605	0/0:16,0:16:42.08:0,42,711	0/0:31,0:31:70.85:0,71,1157	0/0:16,0:16:45.13:0,45,807	0/0:16,0:16:45.08:0,45,796	0/0:16,0:15:30.03:0,30,458	0/0:16,0:16:45.06:0,45,748	0/0:9,0:9:24.55:0,25,487	1/1:16,0:20:48.16:1580,48,0	0/0:11,0:11:27.06:0,27,521	0/0:18,0:16:43.64:0,44,966	0/0:18,0:18:51.14:0,51,908	0/0:7,0:6:14.48:0,14,247	0/0:18,0:18:48.10:0,48,736	0/0:21,0:21:56.48:0,56,1144	0/0:18,0:18:46.44:0,46,831	0/0:25,0:25:53.20:0,53,1132	1/1:8,3:12:28.84:817,29,0	1/1:15,8:24:69.91:2069,70,0	1/1:7,0:5:12.04:248,12,0
chr10	1513329	.	CTGTGTGTGTGTGTG	C	592.07	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.549;DP=560;FS=0.000;HRun=0;HaplotypeScore=188.1613;InbreedingCoeff=0.6364;MQ=61.80;MQ0=6;MQRankSum=-3.662;QD=19.10;ReadPosRankSum=2.393;VQSLOD=2.4660;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:23:14.72:0,15,778	0/0:2,0:2:3.01:0,3,202	0/0:24,0:15:3.01:0,3,37	0/0:32,0:15:11.87:0,12,252	0/0:24,0:23:33.11:0,33,1902	0/0:16,0:16:27.09:0,27,1696	0/0:9,0:10:15.05:0,15,637	0/0:35,0:35:40.17:0,40,1531	0/0:4,0:14:10.61:0,11,564	0/0:21,0:21:29.94:0,30,1390	0/0:10,0:17:18.06:0,18,936	0/0:13,0:13:21.07:0,21,1155	0/0:18,0:17:12.04:0,12,750	0/0:18,0:18:24.08:0,24,1201	0/0:16,0:17:39.13:0,39,2180	0/0:23,0:23:45.15:0,45,2297	1/1:16,14:31:18.06:682,18,0	0/0:12,0:11:30.10:0,30,1793	0/0:15,0:15:27.08:0,27,1472	0/0:24,0:24:45.15:0,45,2499	0/0:35,0:34:36.12:0,36,2016	0/0:10,0:11:24.08:0,24,1445	0/0:11,0:11:18.06:0,18,808	0/0:30,0:32:45.15:0,45,2790	0/0:25,0:25:42.14:0,42,2103	0/0:26,0:26:41.07:0,41,1111	0/0:21,0:22:30.06:0,30,1090	0/0:5,0:6:14.54:0,15,490
chr10	1513458	.	CAGA	C	4054.04	PASS	AB=0.558;AC=9;AF=0.161;AN=56;BaseQRankSum=12.417;DP=569;FS=10.709;HRun=0;HaplotypeScore=85.9530;InbreedingCoeff=0.8651;MQ=64.59;MQ0=0;MQRankSum=0.363;QD=35.88;ReadPosRankSum=2.868;VQSLOD=3.6534;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,33:35:78.17:1180,78,0	0/0:11,0:11:33.11:0,33,716	0/0:19,0:17:29.31:0,29,530	0/0:23,0:22:45.09:0,45,818	0/0:16,0:16:45.15:0,45,973	0/0:12,0:12:36.12:0,36,787	0/0:20,0:20:51.17:0,51,1115	0/0:27,0:27:75.24:0,75,1562	0/0:13,0:13:39.13:0,39,850	0/0:26,0:26:69.24:0,69,1500	0/0:17,0:17:42.14:0,42,903	0/0:16,0:16:48.16:0,48,1046	0/0:20,0:20:57.16:0,57,1184	0/0:20,0:20:57.18:0,57,1186	0/0:16,0:16:45.15:0,45,970	0/0:20,0:20:60.21:0,60,1309	1/1:1,22:23:51.17:809,51,0	0/0:19,0:19:54.19:0,54,1181	0/0:19,0:19:54.18:0,54,1139	0/0:20,0:20:51.18:0,51,1110	0/0:47,0:47:99:0,141,3077	0/0:13,0:13:36.06:0,36,664	0/0:20,0:20:51.17:0,51,1073	0/0:26,0:26:72.25:0,72,1548	0/0:16,0:16:42.14:0,42,911	0/1:6,23:29:55.94:971,0,56	1/1:1,19:20:51.17:809,51,0	1/1:0,6:6:18.06:285,18,0
chr10	1513660	.	GGT	G	675.62	PASS	AB=0.919;AC=22;AF=0.393;AN=56;BaseQRankSum=7.150;DP=594;FS=7.225;HRun=0;HaplotypeScore=83.8893;InbreedingCoeff=0.0211;MQ=61.49;MQ0=15;MQRankSum=-0.848;QD=1.96;ReadPosRankSum=2.383;VQSLOD=1.0058;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:25:10.11:0,10,85	0/0:8,0:8:6.02:0,6,91	0/0:36,0:17:3.01:0,3,36	0/0:43,0:19:3.01:0,3,40	0/1:12,0:12:1.15:1,0,281	0/0:21,0:21:17.26:0,17,430	0/0:31,1:32:8.73:0,9,529	0/1:32,0:32:34.87:35,0,200	1/1:13,6:21:23.73:226,24,0	0/1:8,2:13:60.11:63,0,60	0/0:7,0:7:9:0,9,93	0/1:22,3:25:64.11:64,0,328	0/0:24,1:25:2.72:0,3,442	0/1:18,1:19:12.40:12,0,200	0/1:28,1:29:3.33:3,0,331	0/1:28,2:31:18.69:19,0,502	1/1:12,0:22:9.70:63,10,0	0/1:18,2:20:42.72:43,0,248	0/1:23,0:24:20.37:20,0,246	0/0:14,0:14:14.99:0,15,144	0/0:30,1:32:8.73:0,9,527	0/0:5,0:5:9.02:0,9,116	0/1:6,1:6:18.90:27,0,19	0/1:30,0:31:17.97:18,0,410	0/1:11,1:12:44.37:44,0,78	1/1:11,0:21:17.04:84,17,0	1/1:12,0:15:8.52:42,9,0	1/1:3,0:9:17:83,17,0
chr10	1513905	.	T	TTCTTC	145.07	PASS	AB=0.684;AC=1;AF=0.018;AN=56;BaseQRankSum=2.712;DP=460;FS=9.180;HRun=0;HaplotypeScore=108.5258;InbreedingCoeff=-0.0296;MQ=71.07;MQ0=14;MQRankSum=-0.896;QD=11.16;ReadPosRankSum=-1.186;VQSLOD=2.0834;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:7,6:13:43.24:219,0,43	0/0:11,0:10:10.13:0,10,254	0/0:52,0:19:24.68:0,25,376	0/0:38,0:13:7.58:0,8,188	0/0:31,0:31:83.99:0,84,1288	0/0:19,0:19:57.10:0,57,846	0/0:4,0:4:9:0,9,117	0/0:30,0:30:59.28:0,59,733	0/0:11,0:11:21.07:0,21,373	0/0:13,0:13:27.66:0,28,474	0/0:9,0:9:24.05:0,24,372	0/0:13,0:13:36.10:0,36,635	0/0:9,0:9:24.06:0,24,387	0/0:8,0:8:12.03:0,12,202	0/0:10,0:10:23.99:0,24,332	0/0:7,0:7:21.06:0,21,393	0/0:19,0:19:47.06:0,47,451	0/0:22,0:21:44.15:0,44,658	0/0:16,0:16:42.11:0,42,594	0/0:17,0:17:41.27:0,41,561	0/0:11,0:11:29.40:0,29,387	0/0:4,0:4:12.03:0,12,211	0/0:14,0:14:27.05:0,27,437	0/0:4,0:4:9.03:0,9,200	0/0:16,0:16:39.08:0,39,648	0/0:20,0:20:49.04:0,49,634	0/0:22,0:22:49.86:0,50,686	0/0:17,0:16:35.73:0,36,460
chr10	1514107	.	AAG	A	3086.53	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=13.329;DP=481;FS=1.515;HRun=0;HaplotypeScore=68.5593;InbreedingCoeff=0.9812;MQ=81.37;MQ0=0;MQRankSum=-2.740;QD=36.74;ReadPosRankSum=2.493;VQSLOD=5.6327;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:45.14:0,45,743	0/0:3,0:3:9.03:0,9,161	0/0:17,0:17:51.15:0,51,793	0/0:11,0:11:30.06:0,30,442	0/0:27,0:27:81.22:0,81,1333	0/0:16,0:16:48.15:0,48,827	0/0:13,0:13:36.12:0,36,641	0/0:25,0:25:66.22:0,66,1146	0/0:10,0:10:30.09:0,30,499	0/0:21,0:21:63.21:0,63,1079	0/0:14,0:14:42.14:0,42,741	0/0:14,0:14:39.12:0,39,665	0/0:19,0:19:57.20:0,57,1009	0/0:14,0:14:36.11:0,36,590	0/0:22,0:22:63.22:0,63,1119	0/0:26,0:26:78.27:0,78,1397	1/1:1,11:12:30.07:401,30,0	0/0:14,0:14:39.13:0,39,692	0/0:16,0:16:42.13:0,42,725	0/0:25,0:25:75.23:0,75,1284	0/0:17,0:17:51.16:0,51,869	0/0:6,0:6:18.05:0,18,287	0/0:14,0:14:39.12:0,39,662	0/0:18,0:18:54.15:0,54,893	0/0:16,0:16:42.14:0,42,752	1/1:1,22:23:69.21:941,69,0	1/1:0,25:25:69.23:973,69,0	1/1:2,22:23:66.22:931,66,0
chr10	1514134	.	GACAC	G	197.40	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.663;DP=526;FS=3.885;HRun=0;HaplotypeScore=105.4393;InbreedingCoeff=0.9735;MQ=69.35;MQ0=1;MQRankSum=-3.471;QD=21.93;ReadPosRankSum=0.615;VQSLOD=3.3820;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:42.13:0,42,1023	0/0:5,0:5:15.03:0,15,305	0/0:23,0:20:45.13:0,45,914	0/0:16,0:13:30.10:0,30,717	0/0:28,0:28:78.25:0,78,1913	0/0:17,0:17:42.11:0,42,972	0/0:13,0:13:30.04:0,30,632	0/0:28,0:28:69.08:0,69,1234	0/0:12,0:12:36.11:0,36,870	0/0:18,0:19:50.94:0,51,1131	0/0:14,0:14:42.13:0,42,1025	0/0:16,0:16:45.11:0,45,1017	0/0:21,0:21:60.19:0,60,1457	0/0:22,0:22:60.21:0,60,1519	0/0:24,0:24:69.20:0,69,1656	0/0:30,0:30:87.24:0,87,2071	1/1:4,5:9:18.04:288,18,0	0/0:15,0:15:30.10:0,30,738	0/0:19,0:19:45.14:0,45,1104	0/0:28,0:28:81.21:0,81,1858	0/0:20,0:20:54.15:0,54,1250	0/0:9,0:9:27.08:0,27,629	0/0:13,0:13:39.12:0,39,914	0/0:15,0:17:41.70:0,42,896	0/0:19,0:19:42.06:0,42,941	0/0:19,0:19:51.17:0,51,1234	0/0:33,0:33:90.27:0,90,2182	0/0:22,0:22:57.17:0,57,1407
chr10	1515057	.	GTGA	G	4782.80	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=14.141;DP=602;FS=1.993;HRun=0;HaplotypeScore=89.1743;InbreedingCoeff=0.9913;MQ=73.05;MQ0=0;MQRankSum=-2.796;QD=47.83;ReadPosRankSum=1.636;VQSLOD=6.8438;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,24:24:60.20:1098,60,0	0/0:19,0:19:57.20:0,57,1376	0/0:12,0:12:36.11:0,36,769	0/0:10,0:10:24.08:0,24,548	0/0:29,0:29:84.27:0,84,1973	0/0:20,0:20:60.21:0,60,1467	0/0:25,0:25:75.26:0,75,1848	0/0:29,0:29:87.30:0,87,1984	0/0:21,0:21:63.22:0,63,1524	0/0:28,0:28:84.28:0,84,1974	0/0:26,0:26:78.27:0,78,1891	0/0:21,0:21:63.22:0,63,1490	0/0:21,0:21:60.16:0,60,1377	0/0:21,0:21:63.22:0,63,1552	0/0:17,0:17:51.17:0,51,1225	0/0:27,0:27:81.28:0,81,1985	1/1:0,13:13:21.07:391,21,0	0/0:13,0:13:39.13:0,39,961	0/0:22,0:22:66.23:0,66,1590	0/0:37,0:37:99:0,108,2626	0/0:27,0:27:81.28:0,81,1948	0/0:25,0:25:75.26:0,75,1808	0/0:21,0:21:63.22:0,63,1515	0/0:13,0:13:39.13:0,39,921	0/0:18,0:18:54.18:0,54,1263	1/1:0,22:22:66.21:1174,66,0	1/1:1,36:37:99:1897,102,0	1/1:0,4:4:12.04:224,12,0
chr10	1516094	.	C	CGT	3436.20	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-2.233;DP=685;FS=3.961;HRun=0;HaplotypeScore=87.9546;InbreedingCoeff=0.9930;MQ=74.94;MQ0=1;MQRankSum=-2.994;QD=34.36;ReadPosRankSum=2.248;VQSLOD=6.0813;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,120,1498	0/0:9,0:9:21.06:0,21,253	0/0:30,0:30:78.11:0,78,923	0/0:25,0:24:60.16:0,60,739	0/0:32,0:32:84.26:0,84,1048	0/0:23,0:22:54.11:0,54,641	0/0:14,0:14:36.10:0,36,441	0/0:25,0:25:48.15:0,48,606	0/0:23,0:23:57.18:0,57,719	0/0:28,0:28:75.23:0,75,926	0/0:23,0:23:57.18:0,57,719	0/0:13,0:13:36.12:0,36,453	0/0:28,0:28:75.23:0,75,934	0/0:21,0:21:42.12:0,42,516	0/0:27,0:27:75.24:0,75,946	0/0:13,0:13:33.11:0,33,416	1/1:6,0:33:75.02:662,75,0	0/0:17,0:17:15.05:0,15,464	0/0:29,0:29:81.24:0,81,1007	0/0:25,0:25:69.22:0,69,870	0/0:43,0:43:99:0,120,1495	0/0:15,0:15:30.09:0,30,378	0/0:20,0:20:51.16:0,51,643	0/0:35,0:35:95.33:0,95,1179	0/0:22,0:22:55.04:0,55,660	1/1:2,26:28:78.27:1283,78,0	1/1:5,22:29:69.24:1142,69,0	1/1:2,7:9:21.07:349,21,0
chr10	1517071	.	TGAGGCTGGGGGTGAGGCTGGGGACG	T	4807.22	PASS	AB=0.818;AC=8;AF=0.143;AN=56;BaseQRankSum=8.578;DP=450;FS=4.643;HRun=0;HaplotypeScore=271.6642;InbreedingCoeff=0.7476;MQ=74.21;MQ0=1;MQRankSum=-5.321;QD=57.23;ReadPosRankSum=4.406;VQSLOD=3.2680;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:54.63:0,55,3022	0/0:6,0:6:13.29:0,13,1119	0/0:19,0:16:39.13:0,39,1500	0/1:10,0:9:0.14:0,0,895	0/0:12,0:12:33.11:0,33,2307	0/0:15,0:15:39.13:0,39,2533	0/0:18,0:18:48.15:0,48,3003	0/0:16,0:16:45.15:0,45,3005	0/0:8,0:8:22.32:0,22,1646	0/0:15,0:15:45.15:0,45,2638	0/0:15,0:15:36.10:0,36,1978	0/0:14,0:14:39.13:0,39,3204	0/0:16,0:16:42.14:0,42,3658	0/0:13,0:13:33.11:0,33,2975	0/0:21,0:21:57.20:0,57,5282	0/0:11,0:11:27.09:0,27,2395	1/1:11,14:25:14.91:891,15,0	0/0:19,0:19:57.20:0,57,4978	0/0:17,0:17:36.10:0,36,1923	0/0:17,0:17:39.13:0,39,2799	0/0:44,0:44:99:0,120,9552	0/0:13,0:13:24.08:0,24,1384	0/0:8,0:8:21.07:0,21,786	0/0:16,0:15:42.14:0,42,3397	0/0:12,0:12:36.12:0,36,2370	0/1:9,12:21:99:1310,0,315	1/1:4,14:18:24.08:1604,24,0	1/1:3,7:10:14.92:1002,15,0
chr10	1517522	.	GATTT	G	675.80	PASS	AB=0.667;AC=7;AF=0.125;AN=56;BaseQRankSum=6.816;DP=429;FS=10.845;HRun=0;HaplotypeScore=71.2280;InbreedingCoeff=0.7436;MQ=60.98;MQ0=1;MQRankSum=-5.506;QD=13.52;ReadPosRankSum=1.156;VQSLOD=2.1770;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:57.17:0,57,1290	0/0:13,0:13:21.07:0,21,523	0/0:18,0:14:24.08:0,24,547	0/0:14,0:12:12.04:0,12,245	0/0:14,0:14:36.10:0,36,790	0/0:18,0:18:45.15:0,45,1120	0/0:21,0:21:60.19:0,60,1410	0/0:30,0:30:57.18:0,57,1294	0/0:18,0:18:48.16:0,48,1165	0/0:15,0:15:36.11:0,36,848	0/0:14,0:14:33.11:0,33,792	0/0:12,0:12:24.08:0,24,597	0/0:18,0:18:42.14:0,42,1038	0/0:11,0:11:21.07:0,21,523	0/0:21,0:21:45.15:0,45,1072	0/0:13,0:13:33.10:0,33,772	1/1:3,5:8:9.03:152,9,0	0/0:17,0:17:42.14:0,42,1045	0/0:33,0:32:54.17:0,54,1227	0/0:12,0:12:30.09:0,30,668	0/0:17,0:17:36.12:0,36,890	0/0:7,0:7:12.04:0,12,270	0/0:5,0:5:15.05:0,15,373	0/0:6,0:6:15.05:0,15,373	0/0:8,0:8:21.04:0,21,421	0/1:9,9:18:99:384,0,110	1/1:11,3:14:8.99:121,9,0	1/1:7,3:10:9.03:152,9,0
chr10	1520771	.	TTG	T	401.27	PASS	AB=0.995;AC=16;AF=0.320;AN=50;BaseQRankSum=4.335;DP=610;FS=1.627;HRun=0;HaplotypeScore=86.2875;InbreedingCoeff=0.0532;MQ=60.07;MQ0=22;MQRankSum=-0.716;QD=1.53;ReadPosRankSum=1.219;VQSLOD=1.8083;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:50,0:47:65.31:65,0,127	0/1:6,0:6:0.97:1,0,39	./.	./.	0/0:9,0:8:6.02:0,6,87	0/1:19,1:20:14.56:15,0,142	0/0:22,0:21:14.70:0,15,143	./.	0/1:34,0:32:28.73:29,0,289	0/0:19,0:18:12.81:0,13,121	0/0:10,0:10:5.97:0,6,47	0/0:21,0:21:18:0,18,174	0/1:16,0:16:11.36:11,0,206	0/0:27,0:27:23.93:0,24,315	0/1:29,0:28:4.11:4,0,138	0/0:24,0:23:18.06:0,18,260	1/1:14,0:14:8.85:62,9,0	0/1:15,0:14:23.89:132,0,24	0/1:23,0:22:34.37:44,0,34	0/0:14,0:14:6.02:0,6,82	0/0:54,0:47:8.23:0,8,209	0/0:14,0:13:3.01:0,3,33	0/0:11,0:11:0:0,0,0	0/0:31,1:31:16.75:0,17,449	0/1:9,0:8:13.78:14,0,85	0/1:12,0:12:5.05:31,0,5	1/1:22,2:21:13.30:83,13,0	1/1:10,0:10:8.89:60,9,0
chr10	1520821	.	GAGAGAGAGAGAC	G	907.52	PASS	AB=1.000;AC=8;AF=0.143;AN=56;BaseQRankSum=7.354;DP=600;FS=0.000;HRun=0;HaplotypeScore=160.4550;InbreedingCoeff=0.7056;MQ=49.04;MQ0=58;MQRankSum=-1.421;QD=12.10;ReadPosRankSum=-2.110;VQSLOD=1.9006;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:42:61.12:0,61,2134	0/0:5,0:5:12.04:0,12,571	0/1:16,0:6:8.83:9,0,472	0/0:29,0:7:14.54:0,15,556	0/0:21,0:17:36.12:0,36,1821	0/0:25,0:23:48.63:0,49,2352	0/0:22,0:14:21.05:0,21,759	0/0:36,0:31:76.34:0,76,3074	0/0:27,0:24:30.48:0,30,1388	0/0:21,0:17:41.62:0,42,2260	0/0:15,0:14:21.07:0,21,921	0/0:19,0:18:36.32:0,36,1486	0/0:23,0:20:47.88:0,48,1508	0/0:21,0:21:50.81:0,51,2377	0/0:19,0:19:30.03:0,30,1508	0/0:23,0:22:37.78:0,38,1376	0/1:19,0:16:2.28:72,0,2	0/0:22,0:19:35.75:0,36,1921	0/0:15,0:13:23.38:0,23,829	0/0:17,0:15:30.99:0,31,1526	0/0:38,0:34:67.79:0,68,3323	0/0:13,0:10:18.06:0,18,1013	0/0:8,0:5:3.01:0,3,173	0/0:36,0:33:62.85:0,63,3412	0/0:21,0:18:42.14:0,42,2199	1/1:7,8:11:17.90:512,18,0	1/1:8,7:12:20.67:316,21,0	1/1:5,4:8:8.15:143,8,0
chr10	1520825	.	GAGAGAGAC	G	610.27	PASS	AB=1.000;AC=10;AF=0.179;AN=56;BaseQRankSum=7.118;DP=609;FS=10.253;HRun=0;HaplotypeScore=132.3588;InbreedingCoeff=0.6531;MQ=48.93;MQ0=60;MQRankSum=-2.110;QD=7.27;ReadPosRankSum=-2.863;VQSLOD=0.7847;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:39:52.07:0,52,1201	0/1:6,0:6:6.89:7,0,448	0/1:24,0:9:22.86:23,0,350	0/0:37,0:10:13.84:0,14,393	0/0:19,0:15:36.11:0,36,1313	0/0:24,0:22:51.63:0,52,1714	0/0:22,0:14:21.01:0,21,530	0/0:40,0:35:41.15:0,41,2158	0/0:28,0:25:42.43:0,42,1064	0/0:24,0:20:51.56:0,52,1708	0/0:14,0:13:21.04:0,21,668	0/0:19,0:18:11.99:0,12,1084	0/0:23,0:20:47.55:0,48,1072	0/0:21,0:21:44.96:0,45,1672	0/0:17,0:17:30.05:0,30,1085	0/0:22,0:21:36.65:0,37,964	1/1:7,11:15:8.70:170,9,0	0/0:21,0:19:42.32:0,42,1358	0/0:16,0:14:32.99:0,33,688	0/0:16,0:14:30.57:0,31,1085	0/0:38,0:35:72.85:0,73,2345	0/0:13,0:10:18.06:0,18,726	0/0:7,0:4:3.01:0,3,125	0/0:36,0:33:69.35:0,69,2379	0/0:21,0:18:42.14:0,42,1567	1/1:12,0:8:17.90:317,18,0	1/1:15,0:12:6.80:154,7,0	1/1:9,0:8:5.98:89,6,0
chr10	1522154	.	CT	C	1077.96	PASS	AB=0.618;AC=4;AF=0.071;AN=56;BaseQRankSum=7.041;DP=664;FS=101.488;HRun=1;HaplotypeScore=62.7691;InbreedingCoeff=-0.0769;MQ=78.41;MQ0=0;MQRankSum=-8.812;QD=18.27;ReadPosRankSum=2.428;VQSLOD=-0.0558;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,123,1929	0/0:12,0:12:36.09:0,36,528	0/0:16,0:16:48.09:0,48,694	0/0:21,0:21:63.16:0,63,921	0/0:18,0:18:54.18:0,54,859	0/0:30,0:30:90.31:0,90,1438	0/0:23,0:23:66.23:0,66,1053	0/0:34,0:34:99:0,102,1611	0/0:28,0:28:84.24:0,84,1272	0/0:25,0:25:75.25:0,75,1181	0/0:17,0:17:51.16:0,51,792	0/0:26,0:26:78.25:0,78,1221	0/0:38,0:38:99:0,114,1768	0/0:26,0:26:64.10:0,64,1138	0/0:25,0:25:75.24:0,75,1173	0/0:35,0:35:99:0,105,1630	0/1:9,10:19:99:325,0,287	0/0:21,0:20:60.16:0,60,930	0/0:21,0:21:63.21:0,63,986	0/0:30,0:30:90.30:0,90,1414	0/0:22,0:22:66.23:0,66,1052	0/0:28,0:28:84.29:0,84,1339	0/0:26,0:26:78.22:0,78,1177	0/0:27,0:27:81.26:0,81,1270	0/0:15,0:15:45.14:0,45,697	0/1:7,10:17:99:346,0,260	0/1:6,14:20:99:443,0,138	0/1:1,2:3:38.76:74,0,39
chr10	1523782	.	C	CT	652.47	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-2.265;DP=713;FS=5.433;HRun=10;HaplotypeScore=82.7621;InbreedingCoeff=0.9753;MQ=78.75;MQ0=1;MQRankSum=-1.200;QD=18.64;ReadPosRankSum=0.505;VQSLOD=4.4060;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:9,25:35:72.52:747,73,0	0/0:13,0:13:26.95:0,27,221	0/0:47,0:37:59:0,59,450	0/0:19,0:18:30.56:0,31,227	0/0:19,1:21:18.95:0,19,362	0/0:37,0:37:98.84:0,99,810	0/0:23,0:25:69.97:0,70,550	0/0:39,0:39:77.76:0,78,629	0/0:27,0:28:76.95:0,77,622	0/0:25,0:25:68.89:0,69,561	0/0:20,0:21:61.84:0,62,489	0/0:30,0:31:63.34:0,63,602	0/0:26,0:27:66.96:0,67,525	0/0:18,0:18:41.92:0,42,342	0/0:25,2:27:36.93:0,37,510	0/0:25,0:25:65.84:0,66,532	0/0:20,1:21:16.20:0,16,337	0/0:23,0:25:60.99:0,61,479	0/0:24,0:24:50.85:0,51,418	0/0:29,0:29:49.24:0,49,522	0/0:17,0:17:50.94:0,51,419	0/0:24,0:24:59.90:0,60,490	0/0:28,1:30:47.44:0,47,574	0/0:16,0:16:22.20:0,22,297	0/0:11,0:12:26:0,26,203	0/0:26,0:26:68.75:0,69,551	0/0:33,0:34:97.90:0,98,793	0/0:10,0:10:29.95:0,30,243
chr10	1524644	.	CCTGA	C	2344.42	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=10.769;DP=496;FS=1.210;HRun=0;HaplotypeScore=90.6745;InbreedingCoeff=0.9762;MQ=90.25;MQ0=0;MQRankSum=-9.951;QD=33.98;ReadPosRankSum=1.656;VQSLOD=3.7681;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:66.23:0,66,1727	0/0:4,0:4:12.04:0,12,320	0/0:16,0:16:34.56:0,35,753	0/0:25,0:25:53.58:0,54,1426	0/0:16,0:16:45.15:0,45,1191	0/0:10,0:10:24.08:0,24,640	0/0:21,0:21:51.17:0,51,1324	0/0:24,0:24:66.23:0,66,1639	0/0:18,0:18:51.15:0,51,1296	0/0:19,0:19:45.12:0,45,1140	0/0:18,0:18:54.19:0,54,1438	0/0:15,0:15:42.14:0,42,1119	0/0:19,0:19:51.17:0,51,1307	0/0:21,0:21:60.21:0,60,1574	0/0:26,0:26:75.26:0,75,1975	0/0:29,0:29:84.29:0,84,2234	1/1:7,17:24:39.06:691,39,0	0/0:20,0:20:60.21:0,60,1599	0/0:12,0:12:33.11:0,33,823	0/0:15,0:15:39.11:0,39,983	0/0:26,0:26:63.22:0,63,1650	0/0:6,0:6:15.05:0,15,400	0/0:8,0:8:21:0,21,488	0/0:24,0:24:72.25:0,72,1886	0/0:11,0:11:27.09:0,27,720	1/1:3,9:12:30.09:527,30,0	1/1:3,23:26:57.20:1061,57,0	1/1:0,7:7:12.04:223,12,0
chr10	1525886	.	ATC	A	3081.63	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=10.486;DP=808;FS=2.660;HRun=0;HaplotypeScore=95.7807;InbreedingCoeff=0.9841;MQ=83.27;MQ0=0;MQRankSum=-1.462;QD=36.25;ReadPosRankSum=2.669;VQSLOD=5.6703;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:56:99:0,163,3070	0/0:14,0:14:42.14:0,42,811	0/0:25,0:25:72.23:0,72,1320	0/0:28,0:28:78.10:0,78,1453	0/0:26,0:26:78.27:0,78,1500	0/0:24,0:24:69.24:0,69,1312	0/0:36,0:36:99:0,105,1951	0/0:40,0:40:99:0,114,2142	0/0:26,0:26:78.27:0,78,1506	0/0:35,0:35:99:0,105,2000	0/0:22,0:22:66.23:0,66,1275	0/0:34,0:34:99:0,99,1903	0/0:26,0:26:78.25:0,78,1458	0/0:20,0:20:60.21:0,60,1159	0/0:31,0:31:93.31:0,93,1763	0/0:22,0:22:66.21:0,66,1242	0/0:36,0:36:99:0,102,1968	0/0:20,0:20:60.21:0,60,1132	0/0:30,0:30:87.29:0,87,1635	0/0:23,0:23:69.24:0,69,1319	0/0:46,0:46:99:0,129,2411	0/0:25,0:25:75.26:0,75,1431	0/0:25,0:25:75.26:0,75,1433	0/0:34,0:34:99:0,99,1897	0/0:19,0:19:57.20:0,57,1100	1/1:2,40:42:10.42:1658,10,0	1/1:3,30:33:72.14:1103,72,0	1/1:0,10:10:30.10:459,30,0
chr10	1526779	.	AGT	A	3599.62	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=10.270;DP=571;FS=6.856;HRun=0;HaplotypeScore=68.3480;InbreedingCoeff=0.9891;MQ=74.12;MQ0=1;MQRankSum=-1.962;QD=43.90;ReadPosRankSum=2.591;VQSLOD=5.0432;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:93.30:0,93,1836	0/0:10,0:10:24.08:0,24,488	0/0:17,0:17:36.17:0,36,862	0/0:15,1:15:42.95:0,43,710	0/0:28,0:28:81.28:0,81,1643	0/0:20,0:20:60.21:0,60,1217	0/0:20,0:20:60.21:0,60,1194	0/0:23,0:23:69.23:0,69,1353	0/0:18,0:18:54.17:0,54,1057	0/0:23,0:23:69.23:0,69,1327	0/0:13,0:13:39.13:0,39,776	0/0:27,0:27:81.28:0,81,1624	0/0:22,0:22:66.21:0,66,1285	0/0:24,0:24:72.22:0,72,1365	0/0:23,0:22:69.24:0,69,1399	0/0:18,0:18:54.19:0,54,1096	1/1:0,21:21:57.19:930,57,0	0/0:21,0:21:63.17:0,63,1215	0/0:18,0:17:51.14:0,51,963	0/0:22,0:22:66.23:0,66,1340	0/0:13,0:13:39.13:0,39,777	0/0:28,0:28:81.26:0,81,1607	0/0:17,0:17:48.11:0,48,897	0/0:17,0:17:51.17:0,51,1019	0/0:20,0:20:60.21:0,60,1195	1/1:2,23:25:11.26:1056,11,0	1/1:0,19:19:54.18:880,54,0	1/1:0,17:17:45.15:734,45,0
chr10	1528244	.	GTT	G	2626.80	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=12.768;DP=543;FS=0.444;HRun=8;HaplotypeScore=77.3644;InbreedingCoeff=0.9783;MQ=66.20;MQ0=0;MQRankSum=-1.879;QD=28.55;ReadPosRankSum=3.084;VQSLOD=3.5819;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:78.25:0,78,1291	0/0:10,0:10:24.08:0,24,406	0/0:11,0:11:17.22:0,17,277	0/0:13,0:8:10.14:0,10,169	0/0:24,0:24:69.24:0,69,1157	0/0:22,0:22:60.16:0,60,980	0/0:15,0:15:45.14:0,45,734	0/0:27,0:27:63.22:0,63,1060	0/0:17,0:17:48.16:0,48,809	0/0:21,0:21:60.20:0,60,967	0/0:19,0:19:54.18:0,54,903	0/0:17,0:17:48.16:0,48,809	0/0:17,0:17:48.15:0,48,775	0/0:18,0:18:51.17:0,51,841	0/0:17,0:17:51.17:0,51,862	0/0:21,0:21:57.20:0,57,964	1/1:2,26:28:66.19:797,66,0	0/0:26,0:26:72.25:0,72,1213	0/0:26,0:26:72.22:0,72,1139	0/0:21,0:21:63.21:0,63,1042	0/0:12,0:12:30.10:0,30,504	0/0:18,0:18:51.15:0,51,795	0/0:23,0:23:63.21:0,63,1041	0/0:8,0:8:21.07:0,21,355	0/0:20,0:20:57.19:0,57,935	1/1:3,22:25:66.18:791,66,0	1/1:5,28:33:86.74:1015,87,0	1/1:1,5:6:15.05:182,15,0
chr10	1529555	.	C	CT	7094.04	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-0.513;DP=710;FS=1.070;HRun=0;HaplotypeScore=69.0690;InbreedingCoeff=1.0000;MQ=87.10;MQ0=0;MQRankSum=-4.436;QD=45.47;ReadPosRankSum=2.466;VQSLOD=4.9926;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,52:52:99:2349,148,0	0/0:16,0:16:45.11:0,45,606	0/0:22,0:22:66.22:0,66,909	0/0:26,0:26:69.23:0,69,957	0/0:20,0:20:54.11:0,54,713	0/0:27,0:27:78.21:0,78,1066	0/0:29,0:29:87.29:0,87,1215	0/0:40,0:40:99:0,117,1574	0/0:22,0:22:66.22:0,66,922	0/0:27,0:27:81.20:0,81,1063	0/0:15,0:14:45.15:0,45,626	0/0:32,0:32:93.22:0,93,1255	0/0:17,0:17:51.17:0,51,712	0/0:26,0:26:78.22:0,78,1063	0/0:34,0:34:99:0,102,1425	0/0:28,0:28:81.19:0,81,1088	1/1:1,30:31:90.31:1438,90,0	0/0:18,0:18:54.18:0,54,755	0/0:21,0:21:60.15:0,60,797	0/0:25,0:25:72.24:0,72,998	0/0:13,0:13:39.13:0,39,545	0/0:24,0:23:69.23:0,69,960	0/0:23,0:23:69.23:0,69,955	0/0:31,0:31:90.30:0,90,1258	0/0:18,0:18:54.17:0,54,738	1/1:0,23:23:69.24:1103,69,0	1/1:1,25:26:75.26:1197,75,0	1/1:0,24:24:63.21:1007,63,0
chr10	1530125	.	CAGGT	C	1067.94	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.549;DP=730;FS=4.389;HRun=0;HaplotypeScore=122.2625;InbreedingCoeff=0.9989;MQ=82.01;MQ0=0;MQRankSum=-1.876;QD=48.54;ReadPosRankSum=1.607;VQSLOD=4.5046;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,144,3887	0/0:9,0:9:27.09:0,27,739	0/0:23,0:23:63.22:0,63,1559	0/0:20,0:20:51.91:0,52,1194	0/0:22,0:22:54.19:0,54,1466	0/0:24,0:24:63.22:0,63,1709	0/0:32,0:32:87.30:0,87,2353	0/0:34,0:34:99:0,102,2533	0/0:30,0:30:87.30:0,87,2373	0/0:27,0:27:72.25:0,72,1972	0/0:18,0:18:54.19:0,54,1467	0/0:34,0:34:99:0,99,2712	0/0:25,0:25:72.25:0,72,1942	0/0:22,0:21:63.22:0,63,1690	0/0:31,0:31:84.29:0,84,2270	0/0:39,0:39:99:0,114,3082	1/1:2,20:22:60.21:1163,60,0	0/0:20,0:20:57.20:0,57,1559	0/0:19,0:19:57.20:0,57,1562	0/0:22,0:22:63.22:0,63,1670	0/0:24,0:24:69.24:0,69,1869	0/0:31,0:31:78.25:0,78,2024	0/0:14,0:14:42.14:0,42,1114	0/0:29,0:29:84.27:0,84,2209	0/0:16,0:16:48.16:0,48,1293	0/0:34,0:34:99:0,99,2692	0/0:46,0:45:99:0,138,3747	0/0:15,0:15:45.15:0,45,1169
chr10	1534529	.	C	CT	1114.39	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-7.355;DP=643;FS=2.412;HRun=2;HaplotypeScore=61.3496;InbreedingCoeff=0.9972;MQ=81.29;MQ0=0;MQRankSum=-2.374;QD=33.77;ReadPosRankSum=-0.332;VQSLOD=3.5052;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,102,1263	0/0:11,0:11:30.09:0,30,372	0/0:19,0:19:45.10:0,45,515	0/0:17,0:17:24.55:0,25,490	0/0:14,0:14:42.13:0,42,520	0/0:21,0:21:63.18:0,63,766	0/0:24,0:24:69.19:0,69,821	0/0:22,0:22:63.18:0,63,756	0/0:19,0:19:57.18:0,57,706	0/0:26,0:26:72.20:0,72,860	0/0:12,0:12:33.10:0,33,409	0/0:35,0:35:99:0,105,1278	0/0:27,0:27:72.21:0,72,880	0/0:28,0:28:81.24:0,81,990	0/0:24,0:24:72.20:0,72,862	0/0:25,0:25:66.18:0,66,794	1/1:1,32:33:84.28:1209,84,0	0/0:22,0:22:66.20:0,66,806	0/0:23,0:23:54.16:0,54,658	0/0:28,0:28:78.19:0,78,927	0/0:20,0:20:57.18:0,57,706	0/0:17,0:17:51.16:0,51,623	0/0:23,0:23:69.22:0,69,854	0/0:33,0:33:99:0,99,1226	0/0:17,0:17:45.02:0,45,509	0/0:12,0:12:36.10:0,36,435	0/0:30,0:30:90.26:0,90,1096	0/0:26,0:26:65.92:0,66,733
chr10	1536055	.	AATGCACACCTCTCACAC	A	290.21	PASS	AB=0.671;AC=1;AF=0.018;AN=56;BaseQRankSum=6.139;DP=1140;FS=3.752;HRun=0;HaplotypeScore=501.4186;InbreedingCoeff=-0.0184;MQ=70.07;MQ0=1;MQRankSum=-5.326;QD=5.48;ReadPosRankSum=-3.017;VQSLOD=-0.2158;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:23,26:53:91.36:365,0,91	0/0:16,0:16:42.11:0,42,2288	0/0:47,0:37:19.55:0,20,283	0/0:32,0:30:35.50:0,36,415	0/0:32,0:32:71.21:0,71,3533	0/0:29,0:30:72.15:0,72,3194	0/0:27,0:27:57.13:0,57,2040	0/0:40,0:39:57.09:0,57,854	0/0:41,0:41:96.26:0,96,4957	0/0:57,0:57:99:0,129,5449	0/0:17,0:17:48.10:0,48,2057	0/0:39,0:39:81.22:0,81,3758	0/0:57,0:57:99:0,135,6448	0/0:55,0:55:99:0,114,5986	0/0:48,0:48:99:0,102,5680	0/0:54,0:54:99:0,120,4870	0/0:43,0:43:96.21:0,96,4612	0/0:25,0:25:54.15:0,54,2681	0/0:35,0:35:60.10:0,60,1406	0/0:32,0:32:81.24:0,81,3765	0/0:111,0:111:99:0,206,9389	0/0:44,0:44:99:0,114,6116	0/0:23,0:22:54.13:0,54,2774	0/0:68,0:68:99:0,153,7081	0/0:37,0:37:93.22:0,93,4636	0/0:38,0:38:69.19:0,69,3612	0/0:17,0:16:45.15:0,45,2526	0/0:21,0:21:57.17:0,57,2585
chr10	1537263	.	GGGA	G	784.19	PASS	AC=4;AF=0.074;AN=54;BaseQRankSum=1.956;DP=305;FS=10.710;HRun=0;HaplotypeScore=48.7170;InbreedingCoeff=0.6638;MQ=73.75;MQ0=1;MQRankSum=0.592;QD=20.64;ReadPosRankSum=0.687;VQSLOD=2.2162;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:12,2:14:27.31:290,27,0	0/0:2,0:2:2.96:0,3,19	0/0:14,0:10:30:0,30,351	0/0:19,0:18:34.02:0,34,439	0/0:6,0:6:3.04:0,3,42	0/0:5,0:5:11.99:0,12,134	0/0:14,0:14:30.39:0,30,402	0/0:19,0:19:44.96:0,45,454	0/0:6,0:6:18.03:0,18,235	0/0:6,0:6:17.98:0,18,156	0/0:7,0:7:14.96:0,15,193	0/0:15,0:15:39.05:0,39,465	0/0:8,0:8:21.03:0,21,254	0/0:9,0:9:20.95:0,21,216	0/0:18,0:18:35.98:0,36,536	0/0:14,0:14:36.09:0,36,537	1/1:18,6:24:61.43:614,61,0	0/0:15,0:15:36.49:0,36,490	0/0:6,0:5:3.15:0,3,98	0/0:7,0:7:14.97:0,15,143	0/0:16,0:15:22.72:0,23,361	0/0:11,0:9:17.95:0,18,215	0/0:4,0:4:3.01:0,3,49	0/0:19,0:19:42.46:0,42,546	0/0:10,0:10:23.91:0,24,300	0/0:3,0:3:6:0,6,54	0/0:13,0:14:39.57:0,40,518	./.
chr10	1537805	.	T	TG	9889.17	PASS	AC=52;AF=1.000;AN=52;BaseQRankSum=1.938;DP=315;FS=6.391;HRun=0;HaplotypeScore=239.2065;InbreedingCoeff=-0.0062;MQ=30.61;MQ0=0;MQRankSum=0.017;QD=31.39;ReadPosRankSum=3.102;VQSLOD=3.8981;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:17:39.08:474,39,0	1/1:0,7:7:20.88:216,21,0	./.	./.	1/1:5,8:13:17.70:174,18,0	1/1:0,12:12:36.05:491,36,0	1/1:4,10:14:33.04:424,33,0	1/1:2,15:17:46.42:678,46,0	1/1:6,15:21:45.12:595,45,0	1/1:2,8:10:24.08:333,24,0	1/1:0,14:14:38.53:472,39,0	1/1:2,5:7:14.98:180,15,0	1/1:2,13:16:42.13:583,42,0	1/1:0,12:12:29.18:401,29,0	1/1:2,15:17:45.15:625,45,0	1/1:2,7:9:21.07:298,21,0	1/1:2,4:6:12.04:173,12,0	1/1:0,3:3:9.03:127,9,0	1/1:1,6:7:17.09:222,17,0	1/1:0,8:8:24.08:328,24,0	1/1:0,12:12:16.29:194,16,0	1/1:3,15:18:44.98:551,45,0	1/1:0,20:20:57.22:624,57,0	1/1:0,10:10:20.31:222,20,0	1/1:1,9:10:22.53:331,23,0	1/1:4,12:16:42.14:596,42,0	1/1:5,8:13:24.55:332,25,0	1/1:0,6:6:18.06:245,18,0
chr10	1537814	.	T	TC	1736.76	PASS	AC=52;AF=1.000;AN=52;BaseQRankSum=4.063;DP=357;FS=0.000;HRun=3;HaplotypeScore=295.9599;InbreedingCoeff=0.0335;MQ=33.48;MQ0=0;MQRankSum=-1.265;QD=4.88;ReadPosRankSum=3.539;VQSLOD=-0.0088;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:19:25.08:97,25,0	1/1:6,0:6:14.35:49,14,0	./.	./.	1/1:15,0:15:10.13:44,10,0	1/1:12,0:12:25.33:91,25,0	1/1:17,0:17:22.98:86,23,0	1/1:19,0:19:18.17:53,18,0	1/1:23,0:23:20.34:89,20,0	1/1:14,0:14:18.10:64,18,0	1/1:15,0:15:30.35:114,30,0	1/1:10,0:10:4.81:35,5,0	1/1:19,0:19:29.16:135,29,0	1/1:12,0:12:16.95:70,17,0	1/1:19,1:20:31.29:124,31,0	1/1:11,0:11:20.12:72,20,0	1/1:8,0:8:7.46:26,7,0	1/1:4,0:4:5.89:17,6,0	1/1:9,0:9:10.10:28,10,0	1/1:9,0:9:22.44:81,22,0	1/1:14,0:14:0.84:12,1,0	1/1:18,0:18:36.21:129,36,0	1/1:23,0:23:22.27:101,22,0	1/1:10,0:10:11.81:53,12,0	1/1:12,0:12:20.43:71,20,0	1/1:17,0:17:26.69:92,27,0	1/1:8,6:14:14.76:51,15,0	1/1:6,0:6:10.37:31,10,0
chr10	1538245	.	GGAGA	G	251	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.355;DP=213;FS=5.985;HRun=0;HaplotypeScore=36.4629;InbreedingCoeff=0.6573;MQ=79.26;MQ0=0;MQRankSum=-0.749;QD=31.37;ReadPosRankSum=2.919;VQSLOD=2.4091;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,7:8:18.06:341,18,0	0/0:2,0:2:3.01:0,3,47	0/0:9,0:9:27.06:0,27,324	0/0:15,0:14:37.61:0,38,694	0/0:4,0:4:12.03:0,12,211	0/0:10,0:10:30.08:0,30,666	0/0:8,0:8:24.05:0,24,473	0/0:18,0:18:32.58:0,33,891	0/0:5,0:5:15.05:0,15,403	0/0:8,0:8:21.07:0,21,470	0/0:6,0:6:18:0,18,338	0/0:5,0:5:15.04:0,15,289	0/0:6,0:6:18.05:0,18,412	0/0:5,0:5:15.05:0,15,402	0/0:14,0:14:42.01:0,42,658	0/0:7,0:7:21.03:0,21,361	0/0:8,0:8:24.07:0,24,589	0/0:9,0:9:27.06:0,27,562	0/0:4,0:4:12.03:0,12,216	0/0:4,0:4:12.04:0,12,293	0/0:20,0:20:60.11:0,60,1145	0/0:6,0:6:18.06:0,18,424	0/0:4,0:4:12.02:0,12,266	0/0:6,0:6:18.05:0,18,356	0/0:6,0:6:15.04:0,15,304	0/0:5,0:5:14.88:0,15,337	0/0:8,0:8:21:0,21,293	0/0:3,0:3:9.02:0,9,142
chr10	1539049	.	TTG	T	233.93	PASS	AB=0.884;AC=13;AF=0.241;AN=54;BaseQRankSum=7.239;DP=769;FS=3.823;HRun=0;HaplotypeScore=109.7507;InbreedingCoeff=0.1631;MQ=71.47;MQ0=7;MQRankSum=-3.645;QD=1.04;ReadPosRankSum=1.346;VQSLOD=2.0260;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:29:18.75:87,19,0	0/1:8,2:10:19.13:19,0,167	1/1:40,0:25:0.06:0,0,0	./.	0/0:34,0:36:17.86:0,18,797	0/0:25,1:26:17.41:0,17,639	0/0:32,0:32:60.20:0,60,887	0/0:31,0:30:33.54:0,34,444	1/1:7,0:20:21.60:107,22,0	0/0:45,3:48:24.87:0,25,1040	0/0:12,0:12:21.07:0,21,315	0/0:22,1:23:5.38:0,5,496	0/1:20,3:23:19.30:19,0,380	0/1:24,4:28:45.14:45,0,661	0/0:30,0:30:51.14:0,51,741	0/0:25,1:26:13.63:0,14,598	0/0:16,0:17:16.99:0,17,104	0/0:18,0:18:36.12:0,36,554	0/1:16,3:19:40.05:40,0,91	0/0:23,0:23:50.82:0,51,724	0/0:61,5:65:2.71:0,3,1256	0/0:25,1:26:20.98:0,21,709	0/0:22,1:23:4.90:0,5,470	0/0:46,2:49:36.85:0,37,1335	0/0:27,0:27:51.12:0,51,715	0/1:24,2:26:11.09:11,0,657	0/1:19,2:21:35.27:35,0,340	0/1:7,1:8:22.48:22,0,125
chr10	1539079	.	GT	G	36.99	PASS	AB=0.700;AC=1;AF=0.018;AN=56;BaseQRankSum=4.325;DP=779;FS=7.120;HRun=2;HaplotypeScore=105.8554;InbreedingCoeff=-0.0224;MQ=56.35;MQ0=18;MQRankSum=-1.965;QD=2.64;ReadPosRankSum=-0.078;VQSLOD=-0.5529;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,1:29:22.31:0,22,477	0/0:7,0:7:20.25:0,20,228	0/0:58,0:14:6.65:0,7,417	0/0:50,1:30:61.74:0,62,782	0/0:34,0:34:88.85:0,89,1188	0/0:26,0:26:35.65:0,36,867	0/0:27,2:29:53.16:0,53,1105	0/0:34,0:31:93.30:0,93,1285	0/0:22,0:22:31.52:0,32,212	0/0:35,0:35:99:0,102,1378	0/0:14,0:14:42.13:0,42,574	0/0:25,0:25:68.54:0,69,923	0/0:23,0:23:62.51:0,63,809	0/0:30,0:30:84.50:0,85,1105	0/0:21,0:21:60.20:0,60,879	0/0:22,0:22:65.57:0,66,892	0/1:8,5:13:99:111,0,152	0/0:19,0:18:54.18:0,54,773	0/0:25,0:22:53.52:0,54,698	0/0:21,0:21:60.20:0,60,883	0/0:60,0:60:99:0,153,2075	0/0:26,0:26:71.42:0,71,981	0/0:18,1:19:53.40:0,53,671	0/0:50,0:50:99:0,140,1863	0/0:25,0:25:72.24:0,72,1023	0/0:35,0:35:99:0,101,1327	0/0:17,0:17:40.72:0,41,508	0/0:5,0:5:14.39:0,14,161
chr10	1539155	.	TGG	T	950.20	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.677;DP=658;FS=0.654;HRun=9;HaplotypeScore=96.5016;InbreedingCoeff=0.9393;MQ=69.80;MQ0=3;MQRankSum=-1.327;QD=22.10;ReadPosRankSum=1.122;VQSLOD=2.9328;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,38:42:90.21:1045,90,0	0/0:8,0:9:26.58:0,27,402	0/0:23,0:20:36.52:0,37,505	0/0:27,0:22:34.16:0,34,482	0/0:30,0:30:78.22:0,78,1183	0/0:23,0:24:59.61:0,60,845	0/0:21,0:21:57.14:0,57,880	0/0:33,0:33:63.15:0,63,911	0/0:16,0:17:44.64:0,45,693	0/0:24,0:25:56.65:0,57,802	0/0:14,0:14:42.12:0,42,639	0/0:28,0:29:65.63:0,66,943	0/0:20,0:22:65.62:0,66,898	0/0:13,0:13:39.07:0,39,564	0/0:22,0:24:65.70:0,66,1021	0/0:32,0:34:95.74:0,96,1438	0/0:20,0:20:50.94:0,51,438	0/0:18,0:19:53.56:0,54,762	0/0:20,0:19:48.14:0,48,741	0/0:16,0:18:45.13:0,45,689	0/0:35,0:35:76.99:0,77,1131	0/0:18,0:20:50.14:0,50,755	0/0:18,0:18:51.09:0,51,709	0/0:34,0:34:80.62:0,81,1241	0/0:20,0:20:51.17:0,51,815	0/0:31,0:31:71.87:0,72,645	0/0:21,0:21:8.82:0,9,423	0/0:14,0:14:23.16:0,23,340
chr10	1539156	.	G	GT	732.02	PASS	AB=1.000;AC=4;AF=0.071;AN=56;BaseQRankSum=-2.383;DP=655;FS=26.160;HRun=1;HaplotypeScore=85.1853;InbreedingCoeff=0.4758;MQ=71.28;MQ0=3;MQRankSum=1.067;QD=10.31;ReadPosRankSum=-1.159;VQSLOD=-0.0957;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:42:94.26:0,94,584	0/0:9,0:9:26.82:0,27,337	0/0:23,0:20:25.87:0,26,559	0/0:27,0:23:58.67:0,59,610	0/0:29,0:29:81.16:0,81,1056	0/0:23,0:23:62.89:0,63,785	0/0:19,1:20:17.32:0,17,722	0/0:34,0:34:81.12:0,81,970	0/0:16,0:16:47.88:0,48,621	0/0:25,0:25:68.87:0,69,837	0/0:15,0:15:42.14:0,42,561	0/0:30,0:30:83.81:0,84,958	0/0:22,0:22:51.92:0,52,701	0/0:13,0:13:39.08:0,39,497	0/0:24,0:24:68.96:0,69,909	0/0:34,0:34:91.82:0,92,1232	1/1:2,18:20:54.07:721,54,0	0/0:18,0:18:53.89:0,54,688	0/0:21,0:20:57.13:0,57,724	0/0:18,0:18:51.12:0,51,637	0/0:37,0:37:94.09:0,94,1120	0/0:18,0:18:50.64:0,51,644	0/0:18,0:18:48.13:0,48,611	0/0:33,0:33:92.96:0,93,1164	0/0:20,0:20:57.17:0,57,760	0/1:31,0:31:81.52:115,0,82	0/1:20,0:20:8.58:9,0,61	0/0:14,0:14:26.21:0,26,77
chr10	1540160	.	C	CAGTT	1812.81	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-6.396;DP=712;FS=1.704;HRun=0;HaplotypeScore=114.0394;InbreedingCoeff=0.9997;MQ=78.81;MQ0=0;MQRankSum=-4.427;QD=62.51;ReadPosRankSum=1.187;VQSLOD=5.6124;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,28:29:72.20:1908,72,0	0/0:13,0:13:36.12:0,36,686	0/0:29,0:28:81.05:0,81,1438	0/0:25,0:25:59.78:0,60,1126	0/0:22,0:22:63.19:0,63,1145	0/0:17,0:17:51.16:0,51,934	0/0:31,0:31:87.22:0,87,1511	0/0:26,0:26:72.24:0,72,1359	0/0:17,0:17:48.13:0,48,862	0/0:28,0:28:75.26:0,75,1452	0/0:20,0:20:57.20:0,57,1082	0/0:37,0:37:99:0,111,2067	0/0:26,0:26:78.23:0,78,1440	0/0:32,0:32:93.32:0,93,1789	0/0:36,0:36:99:0,105,1957	0/0:36,0:36:99:0,105,1937	0/0:30,0:30:87.27:0,87,1619	0/0:14,0:14:42.12:0,42,779	0/0:25,0:25:69.21:0,69,1290	0/0:15,0:15:42.14:0,42,814	0/0:30,0:30:87.30:0,87,1675	0/0:19,0:19:54.17:0,54,1004	0/0:16,0:16:42.14:0,42,814	0/0:32,0:32:96.31:0,96,1826	0/0:17,0:17:48.15:0,48,896	0/0:31,0:31:90.31:0,90,1739	0/0:45,0:45:99:0,129,2456	0/0:14,0:14:39.13:0,39,754
chr10	1540572	.	A	ACT	2095.22	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-8.463;DP=703;FS=17.206;HRun=0;HaplotypeScore=80.2348;InbreedingCoeff=0.9929;MQ=70.92;MQ0=1;MQRankSum=-1.952;QD=42.76;ReadPosRankSum=1.954;VQSLOD=3.7289;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,45:48:99:2190,117,0	0/0:7,0:7:21.07:0,21,309	0/0:12,0:11:27.01:0,27,320	0/0:11,0:12:24.08:0,24,341	0/0:39,0:39:99:0,114,1657	0/0:17,0:17:45.15:0,45,661	0/0:16,0:16:48.15:0,48,686	0/0:37,0:37:99:0,108,1523	0/0:21,0:21:60.20:0,60,882	0/0:24,0:24:66.22:0,66,969	0/0:18,0:18:51.17:0,51,750	0/0:28,0:28:75.22:0,75,1061	0/0:24,0:24:66.20:0,66,949	0/0:20,0:20:54.18:0,54,795	0/0:35,0:35:96.32:0,96,1412	0/0:26,0:26:75.24:0,75,1084	0/0:38,0:38:99:0,108,1503	0/0:19,0:19:57.19:0,57,839	0/0:27,0:27:78.18:0,78,1033	0/0:27,0:27:81.26:0,81,1171	0/0:38,0:38:99:0,114,1614	0/0:18,0:18:54.16:0,54,773	0/0:24,0:24:69.23:0,69,1014	0/0:25,0:25:72.21:0,72,1019	0/0:25,0:25:75.22:0,75,1047	0/0:31,0:31:93.30:0,93,1349	0/0:27,0:27:81.26:0,81,1169	0/0:19,0:19:57.19:0,57,836
chr10	1544237	.	G	GTT	563.28	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=2.147;DP=645;FS=0.871;HRun=8;HaplotypeScore=90.7976;InbreedingCoeff=0.6550;MQ=63.06;MQ0=11;MQRankSum=-3.714;QD=8.41;ReadPosRankSum=-1.601;VQSLOD=-0.0064;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,14:26:44.56:655,45,0	0/0:6,0:6:15.03:0,15,167	0/0:43,0:21:20.88:0,21,276	0/1:41,0:12:11.15:11,0,109	0/0:29,0:29:87.20:0,87,949	0/0:22,0:22:63.17:0,63,702	0/0:16,0:16:42.11:0,42,468	0/0:36,0:36:60.58:0,61,806	0/0:19,0:19:54.14:0,54,601	0/0:22,0:22:54.11:0,54,591	0/0:21,0:21:54.14:0,54,602	0/0:19,0:19:57.14:0,57,625	0/0:29,0:29:75.20:0,75,836	0/0:19,0:19:54.13:0,54,593	0/0:21,0:21:57.14:0,57,635	0/0:17,0:17:51.14:0,51,568	0/0:28,0:27:56.34:0,56,369	0/0:24,0:24:63.15:0,63,698	0/0:17,0:16:36.08:0,36,400	0/0:19,0:19:45.11:0,45,502	0/0:20,0:18:51.13:0,51,567	0/0:23,0:23:65.89:0,66,703	0/0:22,0:22:57.11:0,57,625	0/0:14,0:14:39.10:0,39,435	0/0:19,0:19:45.09:0,45,492	0/0:22,0:22:58.29:0,58,499	0/0:36,0:36:75.64:0,76,390	0/0:14,0:14:26.11:0,26,138
chr10	1544250	.	G	GTTTGT	6199.42	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-9.124;DP=650;FS=10.381;HRun=0;HaplotypeScore=107.9730;InbreedingCoeff=0.9644;MQ=57.97;MQ0=11;MQRankSum=-1.090;QD=38.27;ReadPosRankSum=-1.442;VQSLOD=3.5820;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:24:32.24:558,32,0	0/0:6,0:6:18.02:0,18,252	0/0:34,0:14:4.65:0,5,108	0/0:30,0:13:11.55:0,12,154	0/0:30,0:30:72.02:0,72,1063	0/0:24,0:24:60.15:0,60,986	0/0:22,0:22:39.08:0,39,559	1/1:20,12:34:45.07:626,45,0	0/0:19,0:19:48.15:0,48,819	0/0:22,0:22:48.15:0,48,805	0/0:25,0:25:51.16:0,51,849	0/0:19,0:19:39.11:0,39,629	0/0:30,0:30:57.18:0,57,995	0/0:19,0:19:39.11:0,39,670	0/0:24,0:24:42.12:0,42,664	0/0:19,0:19:36.08:0,36,580	1/1:8,19:27:39.13:1107,39,0	0/0:21,0:21:39.12:0,39,696	0/0:20,0:16:33.10:0,33,479	0/0:21,0:21:43.40:0,43,728	0/0:22,0:21:48.14:0,48,774	0/0:23,0:22:51.16:0,51,881	0/0:23,0:23:60.19:0,60,1048	0/0:16,0:16:33.11:0,33,591	0/0:18,0:18:42.14:0,42,717	1/1:6,15:24:54.03:1113,54,0	1/1:7,32:40:75.26:2113,75,0	1/1:1,11:12:24.08:681,24,0
chr10	1544273	.	T	TGTTTTG	3114.36	PASS	AB=1.000;AC=8;AF=0.143;AN=56;BaseQRankSum=11.586;DP=628;FS=8.631;HRun=0;HaplotypeScore=131.8870;InbreedingCoeff=0.4116;MQ=69.72;MQ0=5;MQRankSum=-5.258;QD=21.33;ReadPosRankSum=4.161;VQSLOD=2.7881;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:3,17:27:35.79:969,36,0	0/0:7,0:7:21.03:0,21,394	0/0:30,0:23:40.39:0,40,565	0/0:20,0:13:13.64:0,14,502	0/0:37,0:37:99:0,111,1941	0/0:23,0:23:69.16:0,69,1469	0/0:21,0:21:63.21:0,63,1289	0/1:23,0:23:43.85:44,0,443	0/0:26,0:26:75.24:0,75,1504	0/0:26,0:26:78.25:0,78,1542	0/0:27,0:27:75.24:0,75,1558	0/0:22,0:22:63.18:0,63,1210	0/0:24,0:24:66.20:0,66,1497	0/0:22,0:22:66.20:0,66,1283	0/0:22,0:22:63.19:0,63,1247	0/0:13,0:13:39.11:0,39,850	0/1:29,0:28:99:499,0,256	0/0:23,0:23:69.18:0,69,1327	0/0:16,0:14:42.13:0,42,859	0/0:22,0:22:63.18:0,63,1243	0/0:18,0:18:51.15:0,51,1069	0/0:25,0:25:75.24:0,75,1571	0/0:26,0:26:78.11:0,78,1688	0/0:14,0:14:39.11:0,39,870	0/0:18,0:18:54.18:0,54,1200	0/1:20,0:20:99:411,0,129	0/1:39,0:39:99:993,0,197	1/1:8,0:8:24.08:346,24,0
chr10	1546951	.	TA	T	59.82	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.607;DP=317;FS=4.189;HRun=4;HaplotypeScore=40.1393;InbreedingCoeff=0.9071;MQ=74.47;MQ0=1;MQRankSum=-2.258;QD=6.65;ReadPosRankSum=-1.512;VQSLOD=-0.4695;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,7:9:17.98:150,18,0	0/0:4,0:4:12.04:0,12,168	0/0:17,1:13:19.49:0,19,334	0/0:11,0:8:14.80:0,15,139	0/0:13,0:13:39.13:0,39,540	0/0:14,0:14:39.12:0,39,529	0/0:6,0:6:15.05:0,15,210	0/0:18,0:18:48.15:0,48,642	0/0:13,0:13:39.13:0,39,545	0/0:9,0:9:27.09:0,27,377	0/0:13,0:13:36.10:0,36,475	0/0:12,0:12:36.11:0,36,488	0/0:18,0:18:54.15:0,54,719	0/0:9,0:9:27.09:0,27,377	0/0:9,0:9:27.09:0,27,378	0/0:7,0:7:21.07:0,21,294	0/0:21,0:21:57.19:0,57,783	0/0:12,0:12:36.10:0,36,485	0/0:12,0:12:36.11:0,36,488	0/0:8,0:9:27.08:0,27,361	0/0:11,0:11:30.10:0,30,418	0/0:6,0:6:18.06:0,18,252	0/0:13,0:13:39.13:0,39,546	0/0:9,0:9:27.09:0,27,377	0/0:9,0:9:27.09:0,27,362	0/0:8,0:8:24.07:0,24,322	0/0:16,0:16:48.10:0,48,633	0/0:8,0:8:24.08:0,24,334
chr10	1546956	.	CAAACA	C	253.48	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.066;DP=340;FS=18.881;HRun=0;HaplotypeScore=69.3161;InbreedingCoeff=0.8865;MQ=77.02;MQ0=1;MQRankSum=-2.440;QD=23.04;ReadPosRankSum=-1.828;VQSLOD=1.4908;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:5,6:11:21.07:346,21,0	0/0:4,0:4:12.04:0,12,366	0/0:23,0:17:13.04:0,13,685	0/0:15,0:12:11.03:0,11,241	0/0:14,0:14:42.14:0,42,1133	0/0:13,0:13:39.13:0,39,1122	0/0:6,0:6:18.04:0,18,400	0/0:17,0:17:45.07:0,45,1262	0/0:13,0:13:36.12:0,36,1057	0/0:9,0:9:24.08:0,24,715	0/0:12,0:12:36.09:0,36,980	0/0:13,0:13:36.11:0,36,1026	0/0:18,0:18:51.10:0,51,1453	0/0:10,0:10:27.06:0,27,724	0/0:11,0:11:33.11:0,33,920	0/0:8,0:8:24.06:0,24,651	0/0:20,0:20:57.19:0,57,896	0/0:12,0:12:36.12:0,36,1012	0/0:13,0:13:39.12:0,39,1054	0/0:12,0:12:33.11:0,33,873	0/0:11,0:11:24.08:0,24,732	0/0:6,0:6:18.06:0,18,549	0/0:14,0:14:42.14:0,42,1146	0/0:10,0:10:27.09:0,27,810	0/0:10,0:10:30.09:0,30,820	0/0:9,0:9:27.05:0,27,647	0/0:17,0:17:51.17:0,51,1458	0/0:9,0:9:24.08:0,24,721
chr10	1546960	.	CA	C	567.90	PASS	AB=0.956;AC=6;AF=0.107;AN=56;BaseQRankSum=7.173;DP=341;FS=20.576;HRun=8;HaplotypeScore=41.6932;InbreedingCoeff=0.6195;MQ=80.30;MQ0=2;MQRankSum=0.197;QD=7.47;ReadPosRankSum=-0.909;VQSLOD=-0.1851;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,3:10:20.98:178,21,0	0/0:4,0:4:12.04:0,12,145	0/1:25,1:19:8.06:8,0,324	0/1:18,1:14:24.03:24,0,81	0/0:15,0:15:39.12:0,39,470	0/0:13,0:13:39.11:0,39,456	0/0:6,0:6:12.02:0,12,134	0/0:15,0:15:39.12:0,39,471	0/0:12,0:12:33.10:0,33,399	0/0:8,0:8:24.07:0,24,290	0/0:12,0:12:33.08:0,33,376	0/0:15,0:15:42.12:0,42,496	0/0:17,0:17:48.15:0,48,580	0/0:9,0:9:24.07:0,24,290	0/0:11,0:11:33.10:0,33,398	0/0:8,0:8:21.06:0,21,254	1/1:3,18:21:51.08:492,51,0	0/0:12,0:12:36.11:0,36,433	0/0:13,0:13:36.11:0,36,434	0/0:11,0:11:33.08:0,33,377	0/0:9,0:9:24.07:0,24,290	0/0:6,0:6:18.06:0,18,217	0/0:14,0:14:39.12:0,39,470	0/0:10,0:10:27.08:0,27,323	0/0:10,0:10:27.08:0,27,316	0/0:9,0:9:18.06:0,18,217	0/0:18,0:18:51.16:0,51,615	0/0:8,0:8:24.07:0,24,290
chr10	1547177	.	TC	T	625.12	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.079;DP=568;FS=4.172;HRun=4;HaplotypeScore=51.9585;InbreedingCoeff=0.9918;MQ=90.86;MQ0=0;MQRankSum=-2.696;QD=29.77;ReadPosRankSum=0.809;VQSLOD=3.5070;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,20:21:60.18:720,60,0	0/0:10,0:10:30.10:0,30,420	0/0:25,0:25:18.65:0,19,711	0/0:20,0:20:57.19:0,57,774	0/0:13,0:13:39.13:0,39,544	0/0:27,0:26:78.25:0,78,1073	0/0:24,0:24:72.22:0,72,990	0/0:24,0:24:69.22:0,69,948	0/0:25,0:25:75.22:0,75,1013	0/0:19,0:19:54.18:0,54,755	0/0:15,0:15:45.15:0,45,629	0/0:25,0:25:63.21:0,63,882	0/0:20,0:20:60.20:0,60,839	0/0:15,0:15:39.13:0,39,546	0/0:27,0:27:81.27:0,81,1133	0/0:24,0:24:72.22:0,72,977	0/0:30,0:30:87.24:0,87,1180	0/0:14,0:14:39.13:0,39,543	0/0:21,0:21:63.18:0,63,862	0/0:20,0:20:60.20:0,60,839	0/0:15,0:15:42.14:0,42,586	0/0:20,0:20:60.20:0,60,839	0/0:12,0:12:30.10:0,30,420	0/0:17,0:17:45.15:0,45,629	0/0:14,0:14:42.13:0,42,568	0/0:16,0:16:48.15:0,48,655	0/0:37,0:36:99:0,111,1528	0/0:18,0:18:51.17:0,51,710
chr10	1548724	.	A	ACT	127.31	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=9.733;DP=566;FS=4.270;HRun=0;HaplotypeScore=76.9234;InbreedingCoeff=0.5652;MQ=75.89;MQ0=0;MQRankSum=-4.715;QD=3.64;ReadPosRankSum=2.062;VQSLOD=1.8844;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:18:34.10:145,34,0	0/0:14,0:14:39.13:0,39,597	0/0:21,0:21:57.19:0,57,858	0/0:22,0:21:60.11:0,60,825	0/0:19,0:19:57.19:0,57,873	0/0:28,0:27:84.25:0,84,1243	0/0:12,1:13:36.08:0,36,487	0/0:24,0:24:69.23:0,69,1057	0/0:32,0:32:96.31:0,96,1449	0/0:14,0:14:42.14:0,42,643	0/0:17,0:17:51.16:0,51,760	0/0:26,1:27:41.78:0,42,1070	0/0:22,1:23:26.95:0,27,858	0/0:22,0:22:63.20:0,63,943	0/0:22,1:23:29.52:0,30,948	0/0:19,0:19:57.19:0,57,873	0/1:16,0:16:8.22:87,0,8	0/0:20,0:20:32.16:0,32,693	0/0:15,2:17:0.17:0,0,555	0/0:26,0:26:75.23:0,75,1106	0/0:29,0:29:84.29:0,84,1284	0/0:10,0:10:30.10:0,30,457	0/0:10,0:10:27.09:0,27,412	0/0:18,0:18:51.17:0,51,777	0/0:18,0:18:54.18:0,54,826	0/0:15,3:18:6.78:0,7,648	0/0:33,1:33:62.57:0,63,1367	0/0:13,0:13:39.13:0,39,597
chr10	1548727	.	C	CAT	1423.65	PASS	AB=0.895;AC=5;AF=0.089;AN=56;BaseQRankSum=7.353;DP=577;FS=4.329;HRun=0;HaplotypeScore=75.2690;InbreedingCoeff=0.8298;MQ=75.67;MQ0=0;MQRankSum=-4.865;QD=26.86;ReadPosRankSum=2.278;VQSLOD=4.8955;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,19:19:42.14:785,42,0	0/0:15,0:15:45.11:0,45,605	0/0:21,0:21:60.15:0,60,828	0/0:19,0:19:51.12:0,51,702	0/0:20,0:20:57.18:0,57,819	0/0:26,0:25:78.26:0,78,1147	0/0:10,0:11:27.09:0,27,397	0/0:25,0:25:75.23:0,75,1068	0/0:33,0:33:96.30:0,96,1371	0/0:17,0:17:51.15:0,51,700	0/0:20,0:20:54.15:0,54,753	0/0:25,0:26:34.10:0,34,962	0/0:22,0:23:22.24:0,22,799	0/0:21,0:21:60.20:0,60,881	0/0:23,0:24:27.73:0,28,856	0/0:21,0:21:63.19:0,63,889	1/1:1,15:16:42.14:760,42,0	0/0:20,1:21:45.12:0,45,637	0/1:15,0:17:1.58:2,0,531	0/0:29,0:29:87.19:0,87,1143	0/0:30,0:30:87.23:0,87,1217	0/0:10,0:10:30.09:0,30,423	0/0:10,0:10:27.09:0,27,396	0/0:18,0:18:48.16:0,48,705	0/0:19,0:19:57.17:0,57,802	0/0:16,0:19:8.07:0,8,645	0/0:32,0:32:54.77:0,55,1209	0/0:13,0:13:39.11:0,39,538
chr10	1549819	.	A	AT	417	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-1.885;DP=643;FS=0.000;HRun=4;HaplotypeScore=58.0675;InbreedingCoeff=0.9945;MQ=65.88;MQ0=1;MQRankSum=-0.440;QD=27.80;ReadPosRankSum=-1.745;VQSLOD=2.1371;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,14:15:39.09:512,39,0	0/0:13,0:13:30.08:0,30,340	0/0:18,0:16:36.08:0,36,396	0/0:22,0:20:54.13:0,54,582	0/0:26,0:26:75.17:0,75,826	0/0:36,0:36:99:0,105,1121	0/0:18,0:18:54.14:0,54,602	0/0:38,0:38:99:0,105,1161	0/0:19,0:19:57.15:0,57,638	0/0:29,0:29:84.23:0,84,946	0/0:33,0:33:93.27:0,93,1055	0/0:33,0:33:93.23:0,93,1035	0/0:26,0:26:78.22:0,78,884	0/0:18,0:18:51.13:0,51,569	0/0:34,0:34:99:0,102,1129	0/0:28,0:28:81.23:0,81,919	0/0:13,0:13:33.09:0,33,374	0/0:10,0:10:24.03:0,24,259	0/0:18,0:15:45.12:0,45,503	0/0:26,0:26:49.22:0,49,732	0/0:22,0:22:66.19:0,66,748	0/0:25,0:25:69.11:0,69,763	0/0:17,0:17:23.25:0,23,486	0/0:17,0:17:48.14:0,48,544	0/0:24,0:24:69.18:0,69,767	0/0:19,0:19:57.16:0,57,647	0/0:26,0:26:78.21:0,78,874	0/0:20,0:20:60.17:0,60,681
chr10	1553227	.	G	GT	702.05	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-5.999;DP=669;FS=10.387;HRun=5;HaplotypeScore=62.0011;InbreedingCoeff=0.9794;MQ=83.64;MQ0=0;MQRankSum=-1.344;QD=25.07;ReadPosRankSum=0.346;VQSLOD=2.4592;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:87.11:0,87,910	0/0:9,0:9:21.05:0,21,226	0/0:13,0:13:30.05:0,30,312	0/0:25,0:25:31.13:0,31,594	0/0:24,0:24:69.17:0,69,741	0/0:39,0:39:99:0,111,1189	0/0:18,0:18:51.11:0,51,540	0/0:40,0:39:99:0,114,1217	0/0:18,0:18:45.11:0,45,484	0/0:29,0:29:84.21:0,84,897	0/0:29,0:29:81.20:0,81,870	0/0:30,0:30:81.20:0,81,870	0/0:24,0:24:72.18:0,72,772	0/0:27,0:27:60.44:0,60,742	0/0:32,0:32:93.23:0,93,999	0/0:22,0:22:63.16:0,63,677	1/1:4,24:28:33.97:797,34,0	0/0:19,0:19:54.14:0,54,580	0/0:18,0:18:45.10:0,45,471	0/0:31,0:31:84.21:0,84,902	0/0:16,0:16:48.12:0,48,516	0/0:27,0:27:81.20:0,81,870	0/0:34,0:34:87.21:0,87,935	0/0:16,0:16:48.12:0,48,516	0/0:21,0:21:60.15:0,60,645	0/0:26,0:26:75.19:0,75,806	0/0:20,0:20:57.11:0,57,595	0/0:5,0:5:15.04:0,15,161
chr10	1554644	.	GT	G	1453.65	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=11.101;DP=663;FS=0.484;HRun=4;HaplotypeScore=70.1388;InbreedingCoeff=0.9534;MQ=79.55;MQ0=0;MQRankSum=-3.413;QD=22.71;ReadPosRankSum=3.234;VQSLOD=2.6702;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:36,0:36:85.33:607,85,0	0/0:13,0:12:39.13:0,39,543	0/0:21,0:18:7.46:0,7,192	0/0:19,0:18:15.75:0,16,292	0/0:29,0:29:81.21:0,81,1072	0/0:19,0:19:57.17:0,57,751	0/0:25,0:25:66.15:0,66,852	0/0:31,0:31:90.25:0,90,1155	0/0:28,0:28:78.24:0,78,1058	0/0:21,0:21:48.11:0,48,618	0/0:24,0:24:69.01:0,69,856	0/0:29,0:29:84.24:0,84,1105	0/0:26,0:26:75.09:0,75,951	0/0:23,0:23:68.53:0,69,831	0/0:21,0:21:60.15:0,60,773	0/0:35,0:35:99:0,102,1389	1/1:0,28:28:81.25:968,81,0	0/0:14,0:14:39.09:0,39,522	0/0:19,0:19:54.13:0,54,676	0/0:26,0:26:72.18:0,72,911	0/0:21,0:21:63.19:0,63,845	0/0:17,0:17:51.13:0,51,661	0/0:31,0:31:90.27:0,90,1221	0/0:19,0:19:51.62:0,52,680	0/0:23,0:23:69.16:0,69,866	0/0:32,0:32:93.28:0,93,1245	0/0:24,0:24:69.22:0,69,945	0/0:9,0:9:27.06:0,27,341
chr10	1554647	.	TTA	T	1264.75	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=12.101;DP=668;FS=3.073;HRun=0;HaplotypeScore=84.2699;InbreedingCoeff=0.8848;MQ=77.09;MQ0=0;MQRankSum=-4.034;QD=19.76;ReadPosRankSum=3.682;VQSLOD=3.5199;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,35:35:87.20:1335,87,0	0/0:13,0:12:39.13:0,39,783	0/0:19,0:16:15.01:0,15,280	0/0:16,0:16:12.97:0,13,407	0/0:29,0:29:87.21:0,87,1569	0/0:19,0:19:57.19:0,57,1092	0/0:23,0:23:69.15:0,69,1212	0/0:34,0:34:99:0,102,1792	0/0:28,0:28:84.27:0,84,1601	0/0:20,0:20:54.13:0,54,953	0/0:24,0:24:72.03:0,72,1253	0/0:29,0:29:87.25:0,87,1609	0/0:25,0:25:75.16:0,75,1418	0/0:24,0:24:72.15:0,72,1201	0/0:20,0:20:60.18:0,60,1130	0/0:37,0:37:99:0,111,2110	1/1:29,0:29:3.21:39,3,0	0/0:15,0:15:45.11:0,45,811	0/0:20,0:20:60.16:0,60,1022	0/0:27,0:27:81.19:0,81,1360	0/0:22,0:22:66.19:0,66,1239	0/0:18,0:18:54.15:0,54,977	0/0:33,0:33:76.83:0,77,1826	0/0:18,0:18:54.06:0,54,1004	0/0:23,0:23:69.17:0,69,1183	0/0:34,0:34:99:0,102,1864	0/0:24,0:24:72.23:0,72,1411	0/0:9,0:9:27.08:0,27,487
chr10	1571424	.	G	GC	576.45	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-3.175;DP=568;FS=3.432;HRun=3;HaplotypeScore=54.4087;InbreedingCoeff=0.9777;MQ=60.87;MQ0=3;MQRankSum=0.911;QD=25.06;ReadPosRankSum=2.728;VQSLOD=3.0417;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,20:20:48.16:671,48,0	0/0:15,0:15:45.14:0,45,537	0/0:10,0:7:21.06:0,21,241	0/0:15,0:8:23.98:0,24,256	0/0:31,0:30:75.23:0,75,896	0/0:16,0:15:45.10:0,45,515	0/0:17,0:17:48.15:0,48,576	0/0:29,0:29:87.25:0,87,1032	0/0:15,0:15:45.12:0,45,527	0/0:19,0:19:57.17:0,57,684	0/0:26,0:26:69.21:0,69,827	0/0:14,0:14:39.12:0,39,468	0/0:15,0:15:42.13:0,42,504	0/0:11,0:11:33.10:0,33,396	0/0:15,0:15:42.13:0,42,504	0/0:10,0:10:30.09:0,30,360	0/0:36,0:36:99:0,108,1295	0/0:24,0:24:72.21:0,72,853	0/0:27,0:27:81.18:0,81,924	0/0:32,0:32:96.29:0,96,1145	0/0:27,0:27:81.20:0,81,936	0/0:23,0:23:63.19:0,63,753	0/0:23,0:23:66.20:0,66,791	0/0:6,0:6:15.05:0,15,180	0/0:22,0:22:63.19:0,63,755	0/0:14,0:14:42.11:0,42,492	0/0:34,0:34:96.29:0,96,1150	0/0:19,0:19:57.17:0,57,684
chr10	1573420	.	GGTTTT	G	661.03	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.272;DP=611;FS=5.310;HRun=0;HaplotypeScore=120.6474;InbreedingCoeff=0.8890;MQ=71.13;MQ0=3;MQRankSum=-3.146;QD=33.05;ReadPosRankSum=-1.474;VQSLOD=3.0722;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,5:20:42.14:756,42,0	0/0:7,0:7:15.05:0,15,420	0/0:29,0:15:23.91:0,24,534	0/0:30,0:18:27.25:0,27,557	0/0:33,0:33:83.65:0,84,2051	0/0:15,0:15:39.60:0,40,1114	0/0:22,0:22:36.12:0,36,942	0/0:40,0:40:90.26:0,90,2194	0/0:19,0:19:51.14:0,51,1223	0/0:26,0:26:66.20:0,66,1647	0/0:24,0:24:66.21:0,66,1721	0/0:18,0:18:45.15:0,45,1078	0/0:23,0:23:53.98:0,54,1234	0/0:16,0:16:36.12:0,36,913	0/0:24,0:24:60.17:0,60,1535	0/0:22,0:22:57.20:0,57,1485	0/0:28,0:28:54.18:0,54,1069	0/0:13,0:13:30.10:0,30,748	0/0:24,0:23:48.16:0,48,1291	0/0:34,0:34:87.26:0,87,2191	0/0:18,0:18:36.12:0,36,936	0/0:17,0:17:42.13:0,42,1030	0/0:19,0:19:45.13:0,45,1125	0/0:18,0:18:42.08:0,42,1125	0/0:25,0:25:66.20:0,66,1708	0/0:17,0:17:42.12:0,42,898	0/0:26,0:26:57.19:0,57,1479	0/0:4,0:4:6.02:0,6,173
chr10	1573439	.	T	TTG	1086.43	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.890;DP=647;FS=5.988;HRun=0;HaplotypeScore=108.2609;InbreedingCoeff=0.8947;MQ=61.60;MQ0=11;MQRankSum=0.098;QD=31.04;ReadPosRankSum=2.496;VQSLOD=5.3866;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:56.95:0,57,465	0/0:8,0:8:24.05:0,24,342	0/0:31,0:11:17.92:0,18,321	0/0:30,0:14:23.64:0,24,361	0/0:37,0:37:90:0,90,1302	0/0:18,0:18:50.66:0,51,733	0/0:16,0:16:42.14:0,42,642	0/0:42,0:41:99:0,103,1471	0/0:15,0:15:45.13:0,45,651	0/0:25,0:25:72.19:0,72,1041	0/0:25,0:25:72.23:0,72,1064	0/0:20,0:20:50.87:0,51,653	0/0:20,0:20:54.13:0,54,765	0/0:16,0:16:42.10:0,42,593	0/0:23,0:23:66.20:0,66,953	0/0:25,0:25:69.16:0,69,967	1/1:6,28:35:54.21:1181,54,0	0/0:19,0:18:33.08:0,33,480	0/0:32,0:28:68.87:0,69,996	0/0:33,0:33:88.52:0,89,1294	0/0:16,0:15:42.11:0,42,600	0/0:17,0:17:42.13:0,42,604	0/0:22,0:22:56.72:0,57,756	0/0:20,0:20:48.13:0,48,691	0/0:26,0:26:74.84:0,75,1037	0/0:16,0:15:40.66:0,41,529	0/0:27,0:27:62.31:0,62,819	0/0:4,0:4:6.02:0,6,92
chr10	1573444	.	G	GT	336.96	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.895;DP=620;FS=27.838;HRun=8;HaplotypeScore=84.1626;InbreedingCoeff=0.7932;MQ=61.32;MQ0=11;MQRankSum=-4.342;QD=12.96;ReadPosRankSum=-2.846;VQSLOD=0.8460;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:20,6:26:33.89:431,34,0	0/0:8,0:8:24.01:0,24,218	0/0:28,0:10:4.57:0,5,85	0/0:28,0:13:17.92:0,18,126	0/0:33,0:33:41.12:0,41,424	0/0:19,0:19:24.67:0,25,408	0/0:15,0:15:39.02:0,39,356	0/0:43,0:42:61.73:0,62,641	0/0:14,0:14:35.38:0,35,307	0/0:24,0:24:68.98:0,69,613	0/0:23,0:23:50.69:0,51,438	0/0:19,0:19:34.85:0,35,296	0/0:19,0:19:45.35:0,45,382	0/0:15,0:15:35.89:0,36,314	0/0:24,0:24:63.24:0,63,526	0/0:24,0:24:49.38:0,49,528	0/0:32,0:32:58.80:0,59,498	0/0:18,0:17:31.02:0,31,318	0/0:33,0:29:45.85:0,46,555	0/0:30,0:30:83.95:0,84,744	0/0:16,0:15:31.38:0,31,253	0/0:16,0:16:31.13:0,31,295	0/0:23,0:23:47.42:0,47,430	0/0:21,0:21:35.95:0,36,346	0/0:26,0:26:34.59:0,35,425	0/0:13,0:12:28.06:0,28,250	0/0:24,0:25:25.14:0,25,353	0/0:5,0:4:5.99:0,6,52
chr10	1574878	.	T	TA	1554.47	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-6.723;DP=682;FS=5.127;HRun=10;HaplotypeScore=77.2904;InbreedingCoeff=0.9328;MQ=73.56;MQ0=3;MQRankSum=-0.392;QD=19.68;ReadPosRankSum=0.540;VQSLOD=4.5693;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:9,37:50:73.37:989,73,0	0/0:12,0:12:35.96:0,36,295	0/0:48,0:33:26.65:0,27,269	0/0:40,0:21:11.97:0,12,128	0/0:33,2:35:34.08:0,34,590	0/0:23,0:23:59.92:0,60,493	0/0:16,0:16:38.91:0,39,316	0/0:23,0:24:61.93:0,62,493	0/0:19,0:18:42.73:0,43,322	0/0:35,0:36:97.71:0,98,779	0/0:20,0:21:47.92:0,48,394	0/0:14,0:15:10.52:0,11,268	0/0:33,1:34:55.16:0,55,649	0/0:16,0:16:17.56:0,18,276	0/0:24,0:24:62.86:0,63,503	0/0:16,0:16:44.95:0,45,369	1/1:3,26:29:25.91:687,26,0	0/0:15,0:16:43.91:0,44,343	0/0:15,0:16:35:0,35,277	0/0:23,0:23:59.91:0,60,493	0/0:18,0:18:29.77:0,30,287	0/0:15,1:16:18.52:0,19,318	0/0:21,0:21:53.89:0,54,438	0/0:22,1:23:24.27:0,24,389	0/0:24,0:23:48.27:0,48,521	0/0:33,1:34:54.87:0,55,655	0/0:26,1:27:30.89:0,31,453	0/0:6,0:6:10.56:0,11,96
chr10	1578040	.	CT	C	918.50	PASS	AB=0.852;AC=16;AF=0.286;AN=56;BaseQRankSum=5.412;DP=352;FS=0.000;HRun=14;HaplotypeScore=50.3957;InbreedingCoeff=0.3290;MQ=68.89;MQ0=8;MQRankSum=3.952;QD=5.02;ReadPosRankSum=2.263;VQSLOD=1.2909;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,0:27:38.66:112,39,0	0/0:10,0:10:20.98:0,21,186	0/0:11,0:8:0:0,0,0	0/0:10,0:10:4.62:0,5,37	0/1:11,4:15:5.17:5,0,234	0/0:16,0:16:26.99:0,27,242	0/0:4,1:5:5.84:0,6,42	0/1:29,3:29:18.48:18,0,238	1/1:1,6:7:14.87:103,15,0	0/0:10,1:10:0.87:0,1,140	0/0:4,0:5:2.96:0,3,19	0/1:7,1:8:8.57:9,0,72	0/0:7,0:7:8.97:0,9,76	0/0:4,0:4:9.01:0,9,84	0/0:8,0:8:17.96:0,18,154	0/0:14,0:14:27.03:0,27,251	0/1:8,19:27:10.83:294,0,11	0/0:23,1:23:30.31:0,30,386	0/1:14,1:15:16.10:16,0,143	0/0:11,0:13:24.45:0,24,215	0/0:7,0:6:3:0,3,28	0/0:2,0:2:3:0,3,28	0/0:5,0:5:3:0,3,28	0/1:11,0:10:7.44:7,0,63	0/0:14,1:16:6.30:0,6,185	1/1:7,13:21:39.24:258,39,0	1/1:0,8:8:20.82:144,21,0	1/1:0,7:8:17.82:123,18,0
chr10	1579104	.	C	CT	491.99	PASS	AB=0.884;AC=8;AF=0.143;AN=56;BaseQRankSum=2.738;DP=434;FS=5.641;HRun=12;HaplotypeScore=54.8142;InbreedingCoeff=0.0814;MQ=75.06;MQ0=4;MQRankSum=-0.258;QD=4.07;ReadPosRankSum=-1.209;VQSLOD=0.2958;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:14,9:24:29.62:307,30,0	0/0:3,0:4:8:0,8,50	0/0:31,0:11:2.17:0,2,46	0/0:25,0:11:4.16:0,4,25	0/0:22,0:24:52.57:0,53,370	0/0:12,0:12:26.83:0,27,197	0/0:9,0:9:23.86:0,24,175	0/0:31,0:32:38.72:0,39,435	0/0:9,0:10:16.89:0,17,115	0/0:15,0:16:33.85:0,34,230	0/0:15,0:16:10.10:0,10,174	0/1:13,2:16:24.73:25,0,151	0/0:19,0:19:38.70:0,39,284	0/0:14,0:14:29.26:0,29,201	0/0:20,0:21:46.75:0,47,332	0/0:15,0:15:38.77:0,39,284	0/1:4,12:16:26.54:253,0,27	0/1:15,1:16:0.52:1,0,152	0/0:15,0:16:33.29:0,33,217	0/1:13,0:14:3.26:3,0,132	0/0:3,0:3:2.89:0,3,16	0/0:3,0:3:8.95:0,9,66	0/0:13,0:12:25.63:0,26,178	0/0:9,0:9:20.84:0,21,153	0/1:16,0:17:15.52:16,0,206	0/1:16,2:18:16.60:17,0,220	0/0:13,1:14:6.59:0,7,211	0/0:4,0:4:5.94:0,6,44
chr10	1579120	.	T	TAA	415.64	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.538;DP=438;FS=14.438;HRun=10;HaplotypeScore=62.1815;InbreedingCoeff=0.6755;MQ=73.59;MQ0=4;MQRankSum=-3.059;QD=18.07;ReadPosRankSum=-1.142;VQSLOD=0.5166;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,13:23:36.11:510,36,0	0/0:5,0:5:15.02:0,15,145	0/0:33,0:11:20.85:0,21,191	0/0:25,0:11:5.58:0,6,79	0/0:28,0:29:68.81:0,69,669	0/0:12,0:12:36.08:0,36,366	0/0:10,0:10:14.98:0,15,152	0/0:29,0:29:51.01:0,51,507	0/0:11,0:11:27.05:0,27,275	0/0:18,0:18:29.97:0,30,295	0/0:15,0:15:23.40:0,23,219	0/0:16,0:16:36.06:0,36,365	0/0:20,0:20:42.03:0,42,427	0/0:12,0:12:11.92:0,12,122	0/0:20,0:21:47.83:0,48,469	0/0:15,0:15:42.09:0,42,426	0/0:21,0:21:51.10:0,51,518	0/0:13,0:13:20.71:0,21,212	0/0:16,0:16:39.06:0,39,390	0/0:16,0:16:27.03:0,27,273	0/0:2,0:2:3:0,3,31	0/0:4,0:4:12.03:0,12,122	0/0:8,0:8:21.05:0,21,214	0/0:7,0:7:21.05:0,21,214	0/0:16,0:17:41.76:0,42,395	0/0:22,0:22:51.08:0,51,519	0/0:15,0:15:24.01:0,24,244	0/0:3,0:3:9.02:0,9,92
chr10	1580729	.	TG	T	1919.68	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.714;DP=666;FS=3.018;HRun=5;HaplotypeScore=68.9800;InbreedingCoeff=0.9984;MQ=67.74;MQ0=0;MQRankSum=-2.719;QD=24.93;ReadPosRankSum=2.606;VQSLOD=3.2586;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,41:46:99:1191,105,0	0/0:8,0:8:24.07:0,24,313	0/0:17,0:17:48.16:0,48,657	0/0:15,0:15:42.03:0,42,495	0/0:37,0:37:99:0,102,1360	0/0:30,0:30:84.27:0,84,1132	0/0:23,0:23:69.21:0,69,913	0/0:22,0:22:63.20:0,63,846	0/0:24,0:24:66.18:0,66,856	0/0:29,0:29:84.27:0,84,1119	0/0:25,0:25:75.21:0,75,977	0/0:22,0:22:63.20:0,63,842	0/0:23,0:23:63.19:0,63,843	0/0:21,0:21:60.20:0,60,819	0/0:27,0:27:72.22:0,72,967	0/0:17,0:17:51.17:0,51,696	1/1:1,30:31:75.21:851,75,0	0/0:15,0:15:45.15:0,45,615	0/0:22,0:22:60.18:0,60,790	0/0:20,0:20:57.18:0,57,762	0/0:34,0:34:99:0,99,1285	0/0:26,0:26:78.26:0,78,1066	0/0:18,0:18:48.16:0,48,654	0/0:34,0:34:99:0,102,1395	0/0:23,0:23:69.17:0,69,867	0/0:23,0:23:63.21:0,63,859	0/0:25,0:24:69.14:0,69,890	0/0:9,0:9:27.09:0,27,369
chr10	1580749	.	C	CA	2187.18	PASS	AB=0.525;AC=5;AF=0.089;AN=56;BaseQRankSum=-8.230;DP=614;FS=0.000;HRun=1;HaplotypeScore=64.7585;InbreedingCoeff=0.7708;MQ=68.31;MQ0=0;MQRankSum=-1.573;QD=37.71;ReadPosRankSum=-0.218;VQSLOD=3.7884;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,120,1519	0/0:6,0:6:18.05:0,18,221	0/0:12,0:13:19.78:0,20,292	0/0:6,0:6:11.61:0,12,132	0/0:35,0:35:99:0,105,1331	0/0:27,0:27:78.24:0,78,996	0/0:27,0:27:81.24:0,81,1034	0/0:22,0:22:47.51:0,48,581	0/0:25,0:25:75.20:0,75,941	0/0:24,0:24:72.19:0,72,913	0/0:20,0:20:60.14:0,60,758	0/0:21,0:21:63.19:0,63,804	0/0:23,0:23:66.21:0,66,856	0/0:19,0:19:57.16:0,57,709	0/0:22,0:22:63.20:0,63,805	0/0:19,0:19:57.17:0,57,725	0/0:28,0:28:75.24:0,75,973	0/0:17,0:17:51.15:0,51,646	0/0:17,0:17:48.11:0,48,604	0/0:24,0:24:63.04:0,63,792	0/0:30,0:30:84.22:0,84,1056	0/0:22,0:22:63.20:0,63,816	0/0:15,0:15:45.15:0,45,582	0/0:36,0:36:99:0,108,1389	0/0:15,0:15:42.12:0,42,531	0/1:2,19:21:14.70:789,0,15	1/1:1,29:29:81.27:1212,81,0	1/1:0,7:7:21.07:315,21,0
chr10	1581269	.	T	TA	218.04	PASS	AB=0.750;AC=3;AF=0.054;AN=56;BaseQRankSum=5.647;DP=609;FS=2.129;HRun=8;HaplotypeScore=72.6918;InbreedingCoeff=0.6398;MQ=73.79;MQ0=0;MQRankSum=-4.589;QD=6.61;ReadPosRankSum=-0.952;VQSLOD=0.6347;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:15:20.53:152,21,0	0/0:12,0:12:33.02:0,33,302	0/0:19,0:18:37.23:0,37,327	0/0:20,0:18:21.04:0,21,268	0/0:40,1:41:76.37:0,76,944	0/0:22,0:22:65.97:0,66,586	0/0:11,0:11:30:0,30,269	0/0:42,0:42:86.94:0,87,781	0/0:18,0:18:54.02:0,54,490	0/0:22,0:22:60.03:0,60,549	0/0:27,0:27:66:0,66,594	0/0:21,0:21:56.99:0,57,511	0/0:24,0:24:62.93:0,63,558	0/0:23,0:23:63.03:0,63,577	0/0:26,0:26:78.03:0,78,709	0/0:20,0:20:54.02:0,54,494	0/1:12,6:18:26.19:170,0,26	0/0:17,0:17:44.97:0,45,402	0/0:19,0:19:22.58:0,23,382	0/0:20,0:20:54.02:0,54,493	0/0:11,0:11:27.01:0,27,247	0/0:29,0:29:81.03:0,81,737	0/0:34,0:34:99:0,99,893	0/0:12,0:12:36.01:0,36,325	0/0:20,0:20:60.02:0,60,545	0/0:30,0:30:75:0,75,677	0/0:28,0:28:75.03:0,75,686	0/0:8,0:8:23.97:0,24,211
chr10	1581272	.	A	AAAAAAAAAC	727.97	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.376;DP=607;FS=1.082;HRun=0;HaplotypeScore=171.2699;InbreedingCoeff=0.9762;MQ=72.37;MQ0=1;MQRankSum=-3.209;QD=36.40;ReadPosRankSum=-0.850;VQSLOD=3.1110;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,5:20:24.08:821,24,0	0/0:11,0:11:33.11:0,33,852	0/0:18,0:16:39.11:0,39,851	0/0:22,0:20:22.99:0,23,617	0/0:41,0:41:99:0,117,3019	0/0:22,0:22:66.15:0,66,1512	0/0:12,0:12:33.10:0,33,781	0/0:40,0:40:99:0,99,2065	0/0:18,0:18:54.17:0,54,1301	0/0:22,0:22:63.21:0,63,1621	0/0:24,0:24:66.20:0,66,1718	0/0:20,0:20:60.18:0,60,1443	0/0:22,0:22:63.21:0,63,1509	0/0:22,0:22:66.19:0,66,1606	0/0:27,0:27:78.25:0,78,2049	0/0:19,0:19:57.17:0,57,1378	0/0:17,0:17:40.43:0,40,487	0/0:17,0:17:14.87:0,15,999	0/0:19,0:18:45.61:0,46,1126	0/0:20,0:20:56.97:0,57,1400	0/0:12,0:12:30.09:0,30,756	0/0:28,0:28:84.28:0,84,2105	0/0:33,0:33:96.78:0,97,2423	0/0:12,0:12:36.12:0,36,896	0/0:23,0:23:66.20:0,66,1607	0/0:30,0:30:78.22:0,78,1835	0/0:28,0:28:81.26:0,81,2064	0/0:8,0:8:24.08:0,24,621
chr10	1581277	.	AC	A	148.35	PASS	AB=0.826;AC=3;AF=0.054;AN=56;BaseQRankSum=7.008;DP=628;FS=2.118;HRun=1;HaplotypeScore=71.9489;InbreedingCoeff=0.6145;MQ=70.54;MQ0=1;MQRankSum=-4.082;QD=4.24;ReadPosRankSum=0.276;VQSLOD=0.3818;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:15,4:19:24.13:109,0,24	0/0:13,0:13:39.10:0,39,494	0/0:18,0:16:30.19:0,30,558	0/0:23,0:21:22.12:0,22,498	0/0:40,0:40:99:0,120,1569	0/0:24,0:24:72.13:0,72,880	0/0:12,0:12:36.09:0,36,454	0/0:41,0:41:99:0,120,1474	0/0:19,0:19:57.09:0,57,726	0/0:23,0:23:69.19:0,69,881	0/0:23,0:23:69.20:0,69,902	0/0:21,0:21:63.17:0,63,818	0/0:23,0:23:69.20:0,69,892	0/0:24,0:24:72.17:0,72,904	0/0:28,0:28:84.23:0,84,1090	0/0:19,0:19:57.17:0,57,751	1/1:15,1:16:11.34:138,11,0	0/0:19,0:19:50.81:0,51,649	0/0:19,0:18:54.15:0,54,682	0/0:22,0:22:65.96:0,66,815	0/0:11,0:11:33.08:0,33,415	0/0:30,0:30:90.27:0,90,1173	0/0:33,0:33:96.77:0,97,1277	0/0:17,0:17:51.04:0,51,598	0/0:28,0:28:84.16:0,84,1005	0/0:27,0:27:81.24:0,81,1056	0/0:28,0:28:81.23:0,81,1064	0/0:8,0:8:24.08:0,24,317
chr10	1582403	.	T	TC	816.64	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=6.868;DP=514;FS=0.000;HRun=6;HaplotypeScore=57.5617;InbreedingCoeff=0.6434;MQ=67.93;MQ0=2;MQRankSum=-1.658;QD=17.38;ReadPosRankSum=-0.495;VQSLOD=3.0527;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,26:32:72.23:905,72,0	0/0:8,0:8:15.03:0,15,153	0/0:16,0:13:39.04:0,39,382	0/1:15,0:9:16.52:17,0,118	0/0:15,0:15:42.08:0,42,421	0/0:11,0:11:30.05:0,30,300	0/0:28,0:28:72.15:0,72,727	0/0:23,0:23:60.11:0,60,598	0/0:14,0:14:33.05:0,33,329	0/0:20,0:20:51.09:0,51,506	0/0:20,0:20:57.11:0,57,569	0/0:27,0:27:69.13:0,69,694	0/0:13,0:13:36.08:0,36,367	0/0:21,0:21:57.12:0,57,580	0/0:23,0:23:66.12:0,66,663	0/0:17,0:17:51.10:0,51,514	0/0:20,0:20:25.71:0,26,237	0/0:20,0:20:57.13:0,57,581	0/0:13,0:13:27.05:0,27,275	0/0:17,0:17:48.11:0,48,489	0/0:24,0:24:66.14:0,66,668	0/0:18,0:18:48.11:0,48,489	0/0:10,0:10:30.07:0,30,305	0/0:22,0:22:54.12:0,54,549	0/0:13,0:13:39.09:0,39,397	0/0:18,0:18:54.11:0,54,545	0/0:27,0:27:72.15:0,72,727	0/0:9,0:9:27.06:0,27,272
chr10	1584571	.	C	CA	701.20	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=0.399;DP=620;FS=5.978;HRun=5;HaplotypeScore=58.8355;InbreedingCoeff=0.9978;MQ=69.01;MQ0=0;MQRankSum=-3.938;QD=33.39;ReadPosRankSum=-0.037;VQSLOD=3.9987;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,20:21:57.14:796,57,0	0/0:12,0:12:36.11:0,36,446	0/0:25,0:25:32.01:0,32,704	0/0:17,0:17:48.14:0,48,579	0/0:27,0:27:81.21:0,81,966	0/0:41,0:41:99:0,120,1443	0/0:16,0:16:48.15:0,48,594	0/0:34,0:34:96.30:0,96,1186	0/0:25,0:25:72.23:0,72,892	0/0:30,0:30:78.24:0,78,957	0/0:33,0:33:90.27:0,90,1102	0/0:23,0:23:66.19:0,66,805	0/0:27,0:27:78.24:0,78,965	0/0:17,0:17:45.12:0,45,543	0/0:27,0:27:81.24:0,81,991	0/0:18,0:18:48.14:0,48,582	0/0:20,0:20:54.17:0,54,669	0/0:10,0:10:27.08:0,27,333	0/0:18,0:18:51.16:0,51,627	0/0:23,0:23:69.22:0,69,855	0/0:18,0:18:51.13:0,51,605	0/0:19,0:19:57.17:0,57,694	0/0:17,0:17:45.12:0,45,544	0/0:10,0:10:30.09:0,30,370	0/0:18,0:18:54.16:0,54,657	0/0:32,0:32:93.11:0,93,1116	0/0:30,0:30:90.28:0,90,1115	0/0:12,0:12:36.11:0,36,446
chr10	1585352	.	T	TCAGTCAGCTGTTGAGCCA	4100.28	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-1.512;DP=606;FS=26.296;HRun=0;HaplotypeScore=267.1384;InbreedingCoeff=0.9910;MQ=59.80;MQ0=2;MQRankSum=-7.252;QD=113.90;ReadPosRankSum=0.006;VQSLOD=2.2119;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:12,11:36:60.21:4100,60,0	0/0:6,0:6:18.06:0,18,832	0/0:22,0:19:51.10:0,51,1919	0/0:22,0:21:61.19:0,61,2305	0/0:30,0:30:75.26:0,75,3591	0/0:20,0:20:60.19:0,60,2926	0/0:21,0:21:63.22:0,63,2763	0/0:21,0:20:54.19:0,54,1976	0/0:18,0:18:51.16:0,51,2433	0/0:21,0:21:60.21:0,60,2612	0/0:18,0:18:54.17:0,54,2030	0/0:24,0:24:72.25:0,72,3410	0/0:21,0:21:63.22:0,63,2839	0/0:18,0:18:54.17:0,54,2495	0/0:26,0:26:78.21:0,78,2893	0/0:15,0:15:45.15:0,45,2251	0/0:20,0:20:54.19:0,54,2485	0/0:25,0:25:75.16:0,75,3330	0/0:20,0:18:40.38:0,40,1591	0/0:21,0:21:63.21:0,63,2560	0/0:33,0:33:93.32:0,93,4574	0/0:21,0:21:60.21:0,60,2738	0/0:22,0:22:60.21:0,60,2803	0/0:10,0:10:30.10:0,30,1298	0/0:25,0:25:69.23:0,69,3025	0/0:31,0:31:87.29:0,87,4056	0/0:28,0:28:84.28:0,84,3873	0/0:11,0:11:30.10:0,30,1466
chr10	1586975	.	GGATGTTGTA	G	2541.74	PASS	AB=0.586;AC=2;AF=0.036;AN=56;BaseQRankSum=8.819;DP=613;FS=7.127;HRun=0;HaplotypeScore=157.5205;InbreedingCoeff=-0.0385;MQ=79.32;MQ0=13;MQRankSum=-9.207;QD=45.39;ReadPosRankSum=0.118;VQSLOD=2.9399;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:9,30:34:90.68:2011,0,91	0/0:12,0:12:30.10:0,30,1378	0/0:37,0:27:75.02:0,75,2685	0/0:34,0:27:72.24:0,72,2745	0/0:32,0:32:75.69:0,76,3627	0/0:19,0:19:54.19:0,54,2585	0/0:20,0:20:60.21:0,60,2933	0/0:29,0:28:84.29:0,84,3900	0/0:20,0:20:60.16:0,60,2820	0/0:25,0:25:72.25:0,72,3412	0/0:19,0:19:47.96:0,48,2280	0/0:12,0:12:36.11:0,36,1616	0/0:27,0:27:81.28:0,81,3667	0/0:13,0:13:39.13:0,39,1821	0/0:22,0:22:66.23:0,66,3184	0/0:24,0:24:72.25:0,72,3425	0/1:6,11:15:99:620,0,196	0/0:8,0:8:18.06:0,18,772	0/0:17,0:15:42.14:0,42,2086	0/0:25,0:25:75.24:0,75,3405	0/0:21,0:21:60.21:0,60,2909	0/0:22,0:22:42.13:0,42,2075	0/0:14,0:14:32.94:0,33,1629	0/0:22,0:22:66.23:0,66,3132	0/0:26,0:26:66.23:0,66,3159	0/0:22,0:22:66.21:0,66,3026	0/0:31,0:31:86.88:0,87,4018	0/0:4,0:4:12.04:0,12,596
chr10	1587545	.	GAAGACATTA	G	1052.81	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.785;DP=591;FS=2.376;HRun=0;HaplotypeScore=155.5007;InbreedingCoeff=0.9532;MQ=71.50;MQ0=1;MQRankSum=-6.117;QD=43.87;ReadPosRankSum=0.719;VQSLOD=3.6698;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,19:23:39.13:1148,39,0	0/0:11,0:11:33.08:0,33,1397	0/0:16,0:16:30.06:0,30,1082	0/0:8,0:8:15.02:0,15,441	0/0:24,0:24:54.10:0,54,2064	0/0:25,0:25:75.24:0,75,3275	0/0:17,0:17:39.13:0,39,1782	0/0:37,0:37:96.32:0,96,3988	0/0:17,0:17:48.16:0,48,2269	0/0:34,0:34:99:0,99,4303	0/0:26,0:26:57.18:0,57,2148	0/0:20,0:20:48.12:0,48,1976	0/0:15,0:15:42.13:0,42,1815	0/0:31,0:31:90.29:0,90,4036	0/0:24,0:24:66.23:0,66,3041	0/0:25,0:25:69.22:0,69,2914	0/0:24,0:24:63.22:0,63,2709	0/0:17,0:17:45.14:0,45,1977	0/0:11,0:11:27.09:0,27,1282	0/0:19,0:19:54.19:0,54,2460	0/0:22,0:22:63.20:0,63,2589	0/0:28,0:28:63.13:0,63,2483	0/0:33,0:33:87.30:0,87,3962	0/0:15,0:15:36.12:0,36,1645	0/0:16,0:16:30.10:0,30,1395	0/0:22,0:22:51.18:0,51,2400	0/0:24,0:23:63.20:0,63,2647	0/0:6,0:6:12.04:0,12,569
chr10	1590293	.	A	AT	1031.45	PASS	AB=0.941;AC=5;AF=0.089;AN=56;BaseQRankSum=-6.112;DP=635;FS=1.277;HRun=9;HaplotypeScore=63.6439;InbreedingCoeff=0.7503;MQ=71.66;MQ0=1;MQRankSum=-0.636;QD=17.19;ReadPosRankSum=-0.229;VQSLOD=3.6591;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,18:21:51.14:564,51,0	0/0:6,0:6:18:0,18,156	0/0:16,0:13:17.97:0,18,151	0/0:12,0:11:5.09:0,5,53	0/0:39,0:39:99:0,108,938	0/0:17,0:17:38.97:0,39,339	0/0:17,0:17:44.99:0,45,391	0/0:28,0:28:46.90:0,47,568	0/0:21,0:21:56.99:0,57,495	0/0:21,0:21:53.98:0,54,469	0/0:37,0:37:98.94:0,99,856	0/0:22,0:22:62.97:0,63,543	0/0:15,0:15:44.99:0,45,391	0/0:18,0:18:50.97:0,51,439	0/0:24,0:24:41.62:0,42,520	0/0:17,0:17:47.98:0,48,417	1/1:5,18:23:50.63:585,51,0	0/0:32,0:32:74.94:0,75,648	0/1:15,1:16:9.74:10,0,271	0/0:36,0:36:99:0,102,885	0/0:29,0:29:78.45:0,78,678	0/0:20,0:20:56.98:0,57,495	0/0:29,0:29:68.97:0,69,599	0/0:16,0:16:38.97:0,39,338	0/0:23,0:23:62.98:0,63,547	0/0:28,0:28:74.95:0,75,645	0/0:38,0:38:92.92:0,93,804	0/0:13,0:13:35.92:0,36,299
chr10	1591125	.	TA	T	194.77	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=8.937;DP=500;FS=0.672;HRun=11;HaplotypeScore=53.2261;InbreedingCoeff=0.7816;MQ=70.66;MQ0=0;MQRankSum=0.209;QD=4.75;ReadPosRankSum=1.305;VQSLOD=0.6244;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:41,0:41:31.56:289,32,0	0/0:2,0:2:3.01:0,3,32	0/0:10,0:9:14.67:0,15,131	0/0:11,0:10:14.77:0,15,102	0/0:23,0:23:60.14:0,60,632	0/0:20,1:21:38.51:0,39,608	0/0:16,0:16:24.26:0,24,340	0/0:26,2:28:19.87:0,20,611	0/0:21,0:21:57.14:0,57,608	0/0:11,1:12:11.45:0,11,327	0/0:16,0:16:39.08:0,39,408	0/0:19,0:19:54.14:0,54,576	0/0:33,1:35:71.36:0,71,922	0/0:16,0:16:42.11:0,42,448	0/0:18,0:18:51.13:0,51,544	0/0:15,0:15:45.11:0,45,480	0/0:20,0:20:32.87:0,33,522	0/0:12,0:12:24.06:0,24,256	0/0:21,0:21:54.13:0,54,569	0/0:19,0:21:59.94:0,60,603	0/0:9,0:9:21.05:0,21,224	0/0:6,0:6:18.05:0,18,192	0/0:12,0:12:18.05:0,18,192	0/0:18,1:19:26.49:0,26,487	0/0:17,0:17:45.11:0,45,480	0/0:12,0:12:30.05:0,30,302	0/0:27,0:26:72.17:0,72,761	0/0:20,0:20:42.11:0,42,448
chr10	1591136	.	AT	A	933.26	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=8.080;DP=516;FS=1.498;HRun=2;HaplotypeScore=52.5231;InbreedingCoeff=0.8143;MQ=74.48;MQ0=0;MQRankSum=-0.713;QD=23.93;ReadPosRankSum=0.946;VQSLOD=3.4286;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,32:39:86.70:1028,87,0	0/0:2,0:2:6.01:0,6,65	0/0:11,0:10:22.37:0,22,201	0/0:14,1:15:22.98:0,23,261	0/0:20,0:20:57.19:0,57,759	0/0:22,0:22:64.08:0,64,828	0/0:14,1:15:6.55:0,7,477	0/0:36,0:36:99:0,102,1161	0/0:19,0:19:57.19:0,57,760	0/0:13,0:13:36.99:0,37,459	0/0:14,0:14:42.12:0,42,545	0/0:24,0:24:72.03:0,72,860	0/0:35,0:35:98.49:0,98,1255	0/0:18,0:18:54.13:0,54,662	0/0:22,0:22:66.14:0,66,781	0/0:16,0:16:48.14:0,48,621	0/0:20,0:20:58.37:0,58,725	0/0:14,0:14:16.20:0,16,375	0/0:21,0:21:63.17:0,63,799	0/0:20,0:20:60.18:0,60,781	0/0:7,0:7:21.07:0,21,280	0/0:8,0:8:24.04:0,24,275	0/0:8,0:8:23.93:0,24,280	0/0:23,0:23:65.94:0,66,785	0/0:18,0:18:54.14:0,54,675	0/0:14,0:14:39.09:0,39,465	0/0:27,0:25:78.18:0,78,971	0/0:15,0:15:45:0,45,561
chr10	1592278	.	C	CAA	601.65	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.853;DP=527;FS=0.000;HRun=7;HaplotypeScore=76.2352;InbreedingCoeff=0.8882;MQ=76.95;MQ0=3;MQRankSum=-4.855;QD=35.39;ReadPosRankSum=-0.486;VQSLOD=3.3053;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,12:16:45.12:696,45,0	0/0:6,0:6:18.04:0,18,199	0/0:21,0:18:37.60:0,38,398	0/0:21,0:14:8.34:0,8,252	0/0:26,0:26:72.03:0,72,805	0/0:21,0:20:51.13:0,51,583	0/0:13,0:13:33.06:0,33,363	0/0:23,0:22:62.36:0,62,677	0/0:11,0:11:30.07:0,30,339	0/0:17,0:17:48.14:0,48,555	0/0:25,0:25:66.18:0,66,757	0/0:17,0:17:45.11:0,45,513	0/0:16,0:16:41.89:0,42,456	0/0:17,0:17:45.13:0,45,524	0/0:22,0:22:63.13:0,63,700	0/0:16,0:16:39.09:0,39,444	0/0:19,0:18:45.13:0,45,522	0/0:20,0:21:10.47:0,10,503	0/0:22,0:22:63.01:0,63,683	0/0:23,0:23:49.18:0,49,673	0/0:11,0:11:30.09:0,30,349	0/0:17,0:17:42.11:0,42,476	0/0:20,0:20:45.13:0,45,523	0/0:9,0:9:24.07:0,24,279	0/0:22,0:22:60.18:0,60,698	0/0:27,0:27:81.22:0,81,926	0/0:39,0:39:99:0,105,1211	0/0:8,0:8:21.06:0,21,245
chr10	1592304	.	C	CAACA	1387.57	PASS	AB=0.952;AC=3;AF=0.054;AN=56;BaseQRankSum=-4.416;DP=533;FS=0.808;HRun=0;HaplotypeScore=87.7343;InbreedingCoeff=0.7163;MQ=69.06;MQ0=12;MQRankSum=0.202;QD=30.16;ReadPosRankSum=3.044;VQSLOD=3.6694;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:3,0:15:39.08:0,39,465	0/0:7,0:7:18.06:0,18,335	0/0:25,0:15:27.32:0,27,352	0/0:34,0:18:22.40:0,22,298	0/0:21,0:21:60.17:0,60,1077	0/0:20,0:19:54.17:0,54,1002	0/0:13,0:13:39.11:0,39,690	0/0:28,0:27:84.22:0,84,1422	0/0:10,0:10:27.09:0,27,521	0/0:18,0:18:51.63:0,52,891	0/0:21,0:21:60.20:0,60,1141	0/0:15,0:15:42.11:0,42,723	0/0:16,0:16:45.14:0,45,867	0/0:15,0:15:45.14:0,45,806	0/0:24,0:25:72.16:0,72,1235	0/0:19,0:19:57.17:0,57,1023	1/1:1,24:24:57.19:1482,57,0	0/1:19,0:20:3.72:4,0,845	0/0:27,0:24:66.07:0,66,1033	0/0:22,0:23:58.05:0,58,1057	0/0:10,0:9:27.09:0,27,521	0/0:11,0:11:33.11:0,33,601	0/0:19,0:19:45.08:0,45,793	0/0:8,0:8:21.07:0,21,398	0/0:13,0:13:30.07:0,30,610	0/0:25,0:25:72.22:0,72,1293	0/0:36,0:36:99:0,105,1905	0/0:11,0:11:33.10:0,33,603
chr10	1593119	.	G	GAA	1368.42	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=0.991;DP=662;FS=1.060;HRun=9;HaplotypeScore=79.4805;InbreedingCoeff=0.7666;MQ=72.31;MQ0=0;MQRankSum=-0.083;QD=17.54;ReadPosRankSum=1.124;VQSLOD=2.0567;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,1:33:72.88:286,73,0	0/0:8,0:8:24.06:0,24,255	0/0:16,0:15:6.57:0,7,166	0/1:14,0:13:8.94:9,0,103	0/0:40,0:40:99:0,102,1085	0/0:21,0:20:48.10:0,48,511	0/0:19,0:19:51.12:0,51,543	0/0:37,0:38:95.92:0,96,988	0/0:24,0:24:66.17:0,66,702	0/0:34,0:33:96.22:0,96,1009	0/0:17,0:17:48.12:0,48,511	0/0:16,0:16:35.39:0,35,382	0/0:19,0:19:54.11:0,54,567	0/0:22,0:22:63.14:0,63,662	0/0:18,0:17:54.14:0,54,574	0/0:18,0:18:48.12:0,48,511	1/1:3,27:31:78.26:1201,78,0	0/0:15,0:15:36.04:0,36,372	0/0:30,0:30:72.15:0,72,760	0/0:27,0:27:72.16:0,72,766	0/0:12,0:12:27.04:0,27,287	0/0:27,0:27:41.63:0,42,637	0/0:29,0:29:75.17:0,75,798	0/0:20,0:20:45.07:0,45,479	0/0:29,0:29:87.22:0,87,926	0/0:25,0:24:66.13:0,66,702	0/0:46,0:46:99:0,129,1357	0/0:13,0:13:23.93:0,24,255
chr10	1593655	.	AAAG	A	787.59	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.196;DP=643;FS=10.282;HRun=0;HaplotypeScore=94.7707;InbreedingCoeff=0.9955;MQ=84.42;MQ0=0;MQRankSum=-7.855;QD=29.17;ReadPosRankSum=-0.720;VQSLOD=3.3798;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,10:12:33.09:405,33,0	0/0:11,0:11:33.07:0,33,682	0/0:20,0:20:60.21:0,60,1360	0/0:19,0:19:50.70:0,51,1029	0/0:28,0:28:84.29:0,84,1983	0/0:29,0:29:87.30:0,87,2024	0/0:18,0:18:54.17:0,54,1228	0/0:37,0:37:99:0,99,2329	0/0:23,0:23:69.24:0,69,1615	0/0:31,0:31:90.31:0,90,2102	0/0:27,0:27:81.28:0,81,1914	0/0:21,0:21:63.22:0,63,1489	0/0:28,0:28:81.27:0,81,1872	0/0:17,0:17:48.16:0,48,1130	0/0:33,0:33:99:0,99,2255	0/0:18,0:18:54.18:0,54,1233	1/1:0,15:15:39.13:504,39,0	0/0:22,0:22:66.23:0,66,1531	0/0:16,0:16:48.16:0,48,1121	0/0:36,0:36:99:0,108,2539	0/0:15,0:15:45.11:0,45,969	0/0:24,0:24:72.25:0,72,1689	0/0:27,0:27:81.28:0,81,1914	0/0:13,0:13:39.13:0,39,903	0/0:33,0:32:99:0,99,2342	0/0:32,0:32:93.32:0,93,2201	0/0:32,0:32:93.32:0,93,2194	0/0:6,0:6:18.06:0,18,412
chr10	1593661	.	TG	T	370.09	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.118;DP=633;FS=10.285;HRun=1;HaplotypeScore=67.5876;InbreedingCoeff=0.9980;MQ=82.31;MQ0=0;MQRankSum=-8.053;QD=14.23;ReadPosRankSum=-0.859;VQSLOD=1.6851;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,10:10:29.73:209,30,0	0/0:9,0:9:27.08:0,27,400	0/0:16,0:16:48.15:0,48,698	0/0:19,0:19:51.17:0,51,794	0/0:30,0:30:87.27:0,87,1327	0/0:29,0:29:87.28:0,87,1332	0/0:17,0:17:51.11:0,51,768	0/0:38,0:38:99:0,114,1682	0/0:19,0:19:57.18:0,57,868	0/0:29,0:29:87.29:0,87,1341	0/0:26,0:26:78.27:0,78,1219	0/0:21,0:21:63.19:0,63,940	0/0:27,0:27:81.28:0,81,1262	0/0:19,0:19:54.15:0,54,794	0/0:30,0:30:90.28:0,90,1360	0/0:18,0:18:54.18:0,54,844	1/1:1,15:16:38.72:282,39,0	0/0:20,0:20:60.18:0,60,907	0/0:20,0:20:57.13:0,57,802	0/0:35,0:35:99:0,105,1550	0/0:13,0:13:39.10:0,39,564	0/0:25,0:25:75.24:0,75,1148	0/0:29,0:29:84.26:0,84,1287	0/0:13,0:13:39.12:0,39,581	0/0:34,0:33:99:0,102,1573	0/0:32,0:32:96.31:0,96,1461	0/0:31,0:31:93.28:0,93,1405	0/0:8,0:8:24.08:0,24,364
chr10	1594804	.	TA	T	586.31	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.044;DP=637;FS=0.906;HRun=2;HaplotypeScore=59.2750;InbreedingCoeff=0.9969;MQ=76.69;MQ0=0;MQRankSum=-1.556;QD=29.32;ReadPosRankSum=0.992;VQSLOD=3.1925;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:57.18:0,57,830	0/0:14,0:14:42.14:0,42,629	0/0:14,0:14:37.99:0,38,516	0/0:13,0:13:30.06:0,30,403	0/0:32,0:32:96.24:0,96,1303	0/0:26,0:26:78.24:0,78,1128	0/0:19,0:19:54.13:0,54,736	0/0:43,0:43:99:0,129,1865	0/0:22,0:22:66.21:0,66,968	0/0:47,0:47:99:0,138,2047	0/0:26,0:26:75.24:0,75,1095	0/0:23,0:23:69.23:0,69,1016	0/0:23,0:23:66.22:0,66,986	0/0:23,0:23:66.21:0,66,965	0/0:11,0:11:33.11:0,33,494	0/0:12,0:12:36.12:0,36,539	1/1:0,20:20:54.13:681,54,0	0/0:24,0:24:66.17:0,66,925	0/0:18,0:18:51.17:0,51,746	0/0:38,0:38:99:0,111,1583	0/0:14,0:14:42.14:0,42,628	0/0:20,0:20:60.19:0,60,879	0/0:19,0:19:57.14:0,57,775	0/0:14,0:14:39.06:0,39,554	0/0:23,0:23:66.20:0,66,951	0/0:25,0:25:72.24:0,72,1079	0/0:46,0:46:99:0,132,1853	0/0:9,0:9:24.08:0,24,359
chr10	1596559	.	A	AT	886.17	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=5.452;DP=595;FS=4.199;HRun=8;HaplotypeScore=69.2808;InbreedingCoeff=0.6782;MQ=74.32;MQ0=1;MQRankSum=-0.576;QD=14.07;ReadPosRankSum=1.875;VQSLOD=3.6573;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:25,9:34:87.24:979,87,0	0/0:13,0:13:33:0,33,302	0/0:34,0:24:23.48:0,23,215	0/1:28,0:17:8.19:8,0,78	0/0:26,0:26:68.68:0,69,608	0/0:14,0:14:29.96:0,30,264	0/0:14,0:14:35.99:0,36,317	0/0:26,0:26:72.04:0,72,659	0/0:16,0:16:38.99:0,39,351	0/0:33,0:33:61.58:0,62,808	0/0:24,0:23:62.50:0,63,553	0/0:13,0:13:30.01:0,30,274	0/0:15,0:15:41.99:0,42,374	0/0:16,0:16:45.02:0,45,412	0/0:16,0:16:44.99:0,45,403	0/0:19,0:20:59.06:0,59,523	0/0:25,0:25:69.04:0,69,631	0/0:20,0:20:45.02:0,45,412	0/0:24,1:25:28.38:0,28,500	0/0:20,0:20:57:0,57,512	0/0:17,0:17:42.01:0,42,381	0/0:16,0:16:48:0,48,430	0/0:28,0:28:78.01:0,78,705	0/0:12,0:12:33.02:0,33,302	0/0:23,0:23:66.02:0,66,599	0/0:32,0:32:68.52:0,69,611	0/0:24,0:24:69.02:0,69,626	0/0:10,0:10:30.02:0,30,274
chr10	1596569	.	ATT	A	493.73	PASS	AB=0.967;AC=3;AF=0.054;AN=56;BaseQRankSum=3.972;DP=594;FS=6.026;HRun=11;HaplotypeScore=83.2998;InbreedingCoeff=0.7410;MQ=73.48;MQ0=1;MQRankSum=-0.653;QD=8.98;ReadPosRankSum=1.430;VQSLOD=1.4375;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:35:66.61:0,67,268	0/0:8,0:9:24.08:0,24,351	0/0:38,0:27:58.49:0,58,702	0/1:28,0:15:2.50:2,0,77	0/0:22,0:24:65.19:0,65,938	0/0:12,0:12:33.11:0,33,508	0/0:14,0:14:36.12:0,36,553	0/0:25,0:28:62.69:0,63,896	0/0:17,0:17:42.14:0,42,642	0/0:35,0:35:75.25:0,75,1152	0/0:24,0:24:68.72:0,69,1025	0/0:9,0:9:21.07:0,21,323	0/0:14,0:14:42.14:0,42,618	0/0:16,0:16:33.09:0,33,485	0/0:20,0:21:51.16:0,51,747	0/0:19,0:19:42.14:0,42,647	1/1:5,21:26:41.50:588,42,0	0/0:19,0:19:39.13:0,39,599	0/0:22,0:23:47.65:0,48,699	0/0:21,0:21:57.18:0,57,855	0/0:15,0:15:33.11:0,33,508	0/0:17,0:17:48.16:0,48,739	0/0:25,0:25:63.21:0,63,966	0/0:12,0:12:30.10:0,30,462	0/0:25,0:27:68.20:0,68,963	0/0:24,0:25:62.70:0,63,932	0/0:25,0:26:60.20:0,60,893	0/0:12,0:12:36.10:0,36,519
chr10	1600410	.	TACAC	T	287.11	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=4.576;DP=474;FS=1.342;HRun=0;HaplotypeScore=74.8608;InbreedingCoeff=0.8299;MQ=58.93;MQ0=3;MQRankSum=0.642;QD=14.36;ReadPosRankSum=3.233;VQSLOD=3.1187;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:69.03:0,69,1531	1/1:0,8:8:15.05:285,15,0	0/0:11,0:2:3.01:0,3,64	0/0:15,0:4:8.31:0,8,72	0/0:26,0:26:60.19:0,60,1405	0/0:18,0:18:48.15:0,48,1138	0/0:14,0:14:39.08:0,39,756	0/0:34,0:34:93.22:0,93,2019	0/0:10,0:10:24.06:0,24,559	0/0:19,0:19:54.15:0,54,1266	0/0:20,0:20:60.21:0,60,1512	0/0:11,0:11:30.10:0,30,769	0/0:15,0:15:39.11:0,39,935	0/0:12,0:12:36.08:0,36,855	0/0:23,0:23:62.97:0,63,1452	0/0:13,0:13:36.07:0,36,770	1/1:12,0:12:11.81:115,12,0	0/0:9,0:9:24.05:0,24,549	0/0:19,0:16:39.13:0,39,893	0/0:29,0:29:84.23:0,84,1962	0/0:12,0:12:36.08:0,36,834	0/0:5,0:5:15.05:0,15,369	0/0:16,0:16:39.12:0,39,931	0/0:3,0:3:9.01:0,9,186	0/0:20,0:20:57.09:0,57,1111	0/0:29,0:29:81.01:0,81,1813	0/0:29,0:28:81.13:0,81,1864	0/0:13,0:13:30.08:0,30,682
chr10	1600414	.	CACAT	C	322.08	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=4.753;DP=468;FS=0.000;HRun=0;HaplotypeScore=74.2487;InbreedingCoeff=0.8410;MQ=61.03;MQ0=3;MQRankSum=-0.088;QD=16.10;ReadPosRankSum=1.939;VQSLOD=3.1242;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:54.19:0,54,1377	1/1:8,0:8:15.04:160,15,0	0/0:11,0:2:3.01:0,3,54	0/0:18,0:7:8.54:0,9,104	0/0:25,0:25:57.15:0,57,1296	0/0:17,0:17:48.13:0,48,1103	0/0:13,0:13:30.09:0,30,702	0/0:38,0:38:96.30:0,96,2077	0/0:10,0:10:21.06:0,21,487	0/0:18,0:18:48.16:0,48,1214	0/0:21,0:21:63.19:0,63,1466	0/0:10,0:10:30.10:0,30,736	0/0:16,0:16:39.12:0,39,881	0/0:12,0:12:30.10:0,30,770	0/0:21,0:21:54.17:0,54,1318	0/0:12,0:12:27.08:0,27,641	1/1:5,7:12:17.86:278,18,0	0/0:8,0:8:21.07:0,21,528	0/0:19,0:15:36.11:0,36,835	0/0:29,0:29:75.21:0,75,1753	0/0:12,0:12:33.11:0,33,797	0/0:5,0:5:15.02:0,15,329	0/0:14,0:14:36.11:0,36,864	0/0:4,0:4:9.03:0,9,202	0/0:19,0:19:36.10:0,36,870	0/0:29,0:29:69.23:0,69,1693	0/0:27,0:26:72.23:0,72,1744	0/0:13,0:13:27.08:0,27,627
chr10	1600466	.	CAT	C	430.09	PASS	AB=0.898;AC=13;AF=0.232;AN=56;BaseQRankSum=6.976;DP=446;FS=0.000;HRun=0;HaplotypeScore=53.9928;InbreedingCoeff=-0.0285;MQ=65.22;MQ0=5;MQRankSum=-0.712;QD=2.12;ReadPosRankSum=1.005;VQSLOD=0.9926;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,1:22:17.51:0,18,787	0/0:7,0:7:6.02:0,6,93	0/0:8,0:4:0.47:0,0,1	0/0:24,0:6:0:0,0,0	0/1:26,4:30:52.68:53,0,781	0/1:17,1:19:0.59:1,0,450	0/1:5,0:5:21.44:21,0,150	0/0:32,2:35:15.39:0,15,895	0/0:12,0:12:33.11:0,33,531	0/0:18,1:19:14.49:0,14,705	0/1:18,3:21:34.46:34,0,437	0/0:11,0:11:30.10:0,30,487	0/0:14,0:14:33.11:0,33,528	0/0:8,0:8:12.04:0,12,192	0/1:14,3:17:31.20:31,0,539	0/1:11,1:12:9.58:10,0,362	1/1:2,14:15:24.08:294,24,0	0/0:11,0:11:30.10:0,30,475	0/0:11,0:10:23.87:0,24,353	0/0:20,0:21:38.91:0,39,582	0/1:19,4:23:49.72:50,0,767	0/0:4,0:4:6.02:0,6,97	0/1:11,1:12:12.61:13,0,292	0/0:7,0:7:18.06:0,18,292	0/1:13,1:14:0.55:1,0,497	0/1:18,3:21:62.76:63,0,543	0/0:27,1:28:35.55:0,36,1024	0/1:10,3:13:3.55:4,0,454
chr10	1602674	.	GT	G	894.99	PASS	AB=0.889;AC=7;AF=0.125;AN=56;BaseQRankSum=9.553;DP=613;FS=1.051;HRun=11;HaplotypeScore=61.3440;InbreedingCoeff=0.4672;MQ=56.91;MQ0=5;MQRankSum=-1.049;QD=8.06;ReadPosRankSum=2.393;VQSLOD=2.1147;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,32:38:93.94:751,94,0	0/0:7,0:7:12.03:0,12,128	0/0:11,0:4:6.90:0,7,66	0/0:13,0:4:2.84:0,3,14	0/0:32,1:33:62.53:0,63,850	0/0:25,0:25:66.15:0,66,696	0/0:16,1:18:28.14:0,28,474	0/0:38,1:38:54.19:0,54,768	0/0:17,1:19:23.31:0,23,437	0/1:21,3:24:13.61:14,0,466	0/0:21,1:24:32.15:0,32,497	0/0:22,2:24:10.86:0,11,526	0/1:14,2:16:4.17:4,0,370	0/0:22,0:24:41.27:0,41,474	0/0:15,0:15:39.10:0,39,416	0/0:17,0:17:33.06:0,33,337	1/1:7,10:17:29.94:246,30,0	0/0:18,0:18:42.04:0,42,433	0/0:20,0:15:7.83:0,8,248	0/0:41,1:44:86.30:0,86,1091	0/0:9,0:9:18.03:0,18,185	0/1:14,2:16:16.93:17,0,253	0/0:26,0:26:63.59:0,64,650	0/0:13,1:12:33.08:0,33,352	0/0:17,0:17:45.11:0,45,474	0/0:28,3:32:34.75:0,35,736	0/0:32,0:33:81.04:0,81,845	0/0:18,0:19:38.26:0,38,539
chr10	1606371	.	C	CAT	1044.82	PASS	AB=0.895;AC=5;AF=0.089;AN=56;BaseQRankSum=-5.930;DP=357;FS=3.871;HRun=0;HaplotypeScore=38.6885;InbreedingCoeff=0.4468;MQ=66.23;MQ0=0;MQRankSum=-1.291;QD=20.90;ReadPosRankSum=0.001;VQSLOD=3.3595;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,13:16:36.12:590,36,0	0/0:4,0:4:12.04:0,12,149	0/0:4,0:3:3.01:0,3,37	0/0:7,0:6:8.82:0,9,88	0/0:20,0:21:38.94:0,39,450	0/0:21,1:22:4.96:0,5,583	0/0:7,0:7:18.06:0,18,223	0/0:33,0:33:75.22:0,75,901	0/0:7,0:8:11.87:0,12,126	0/0:15,0:15:30.09:0,30,372	0/1:15,2:17:16.11:16,0,337	0/0:7,0:7:21.05:0,21,245	0/0:10,0:10:24.08:0,24,297	0/0:5,0:5:6.02:0,6,74	0/0:11,0:11:21.07:0,21,260	0/0:11,0:11:27.06:0,27,320	1/1:3,14:17:1.93:553,2,0	0/0:8,0:8:21.03:0,21,243	0/0:9,0:9:18.05:0,18,213	0/0:17,0:17:39.12:0,39,483	0/0:3,0:3:6.02:0,6,74	0/0:10,0:10:18.06:0,18,223	0/0:6,0:6:9.03:0,9,112	0/0:3,0:3:3.01:0,3,37	0/0:28,0:28:63.20:0,63,781	0/0:14,0:15:38.95:0,39,460	0/0:30,0:30:84.23:0,84,1005	0/0:13,0:13:27.08:0,27,335
chr10	1607793	.	G	GT	1223.45	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-8.196;DP=628;FS=4.404;HRun=10;HaplotypeScore=60.5324;InbreedingCoeff=0.6759;MQ=68.51;MQ0=0;MQRankSum=-3.571;QD=26.03;ReadPosRankSum=-0.227;VQSLOD=3.7555;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,44:47:99:1318,104,0	0/0:11,0:11:29.96:0,30,246	0/0:14,0:13:12.70:0,13,161	0/0:13,0:12:17.94:0,18,148	0/0:30,0:31:91.88:0,92,736	0/0:31,0:31:86.85:0,87,708	0/0:23,2:26:29.92:0,30,434	0/0:30,0:30:59.76:0,60,492	0/0:27,0:27:71.90:0,72,591	0/0:26,0:27:26.98:0,27,417	0/0:15,0:15:35.94:0,36,295	0/0:23,0:23:62.90:0,63,514	0/0:17,1:18:6.94:0,7,263	0/0:11,0:13:31.02:0,31,233	0/0:26,0:27:70.94:0,71,572	0/0:25,0:25:65.92:0,66,542	0/0:17,0:18:43.93:0,44,345	0/0:13,1:14:0.96:0,1,214	0/0:24,0:24:53.90:0,54,441	0/0:26,0:26:58.92:0,59,473	0/0:10,0:11:29.01:0,29,228	0/0:16,0:17:34.97:0,35,277	0/0:29,0:29:74.89:0,75,613	0/0:24,0:24:65.90:0,66,539	0/0:19,0:19:44.94:0,45,369	0/0:29,0:29:74.88:0,75,613	0/0:36,0:37:97.83:0,98,785	0/0:2,0:2:5.99:0,6,49
chr10	1611559	.	GCA	G	2389.69	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.856;DP=756;FS=2.242;HRun=0;HaplotypeScore=87.8813;InbreedingCoeff=0.9958;MQ=69.21;MQ0=3;MQRankSum=-1.444;QD=33.66;ReadPosRankSum=1.895;VQSLOD=5.8613;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,42:43:99:1605,117,0	0/0:9,0:9:24.08:0,24,426	0/0:26,0:25:63.17:0,63,1014	0/0:18,0:18:26.81:0,27,718	0/0:38,0:38:99:0,105,1788	0/0:30,0:30:87.30:0,87,1518	0/0:24,0:24:66.21:0,66,1108	0/0:26,0:26:72.23:0,72,1193	0/0:28,0:28:78.25:0,78,1329	0/0:23,0:23:63.22:0,63,1110	0/0:29,0:29:75.24:0,75,1283	0/0:25,0:25:72.25:0,72,1267	0/0:26,0:26:69.24:0,69,1216	0/0:31,0:31:87.30:0,87,1507	0/0:27,0:27:81.28:0,81,1395	0/0:25,0:25:69.22:0,69,1196	1/1:2,23:25:66.22:906,66,0	0/0:8,0:8:21.07:0,21,364	0/0:28,0:28:72.23:0,72,1178	0/0:31,0:31:87.30:0,87,1488	0/0:52,0:52:99:0,124,2346	0/0:28,0:28:78.25:0,78,1347	0/0:29,0:29:78.27:0,78,1365	0/0:29,0:29:84.29:0,84,1474	0/0:28,0:28:75.24:0,75,1288	0/0:32,0:32:93.31:0,93,1609	0/0:26,0:26:78.21:0,78,1283	0/0:9,0:9:27.09:0,27,453
chr10	1617336	.	CT	C	255	PASS	AB=0.929;AC=4;AF=0.071;AN=56;BaseQRankSum=5.512;DP=482;FS=0.846;HRun=10;HaplotypeScore=49.4401;InbreedingCoeff=0.4457;MQ=75.43;MQ0=0;MQRankSum=-0.841;QD=5.80;ReadPosRankSum=-0.742;VQSLOD=0.3321;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,16:20:38.98:339,39,0	0/0:4,0:4:12.03:0,12,133	0/0:16,0:11:15.16:0,15,156	0/1:17,0:12:17.97:18,0,23	0/0:32,0:32:78.17:0,78,850	0/0:14,1:16:38.94:0,39,413	0/0:7,0:7:15.04:0,15,166	0/0:20,0:21:41.95:0,42,446	0/0:16,0:16:36.10:0,36,397	0/0:18,0:18:10.35:0,10,339	0/0:21,0:22:59.98:0,60,636	0/0:18,0:18:54.15:0,54,597	0/0:15,0:15:45.12:0,45,498	0/0:13,0:13:33.09:0,33,365	0/0:19,0:19:54.15:0,54,597	0/0:15,0:15:39.10:0,39,427	0/0:30,0:30:69.17:0,69,753	0/0:24,0:24:57.15:0,57,624	0/0:13,0:13:27.07:0,27,293	0/0:23,0:23:66.14:0,66,702	0/0:11,0:11:30:0,30,308	0/0:10,0:10:27.07:0,27,298	0/0:21,0:21:63.14:0,63,675	0/1:5,1:6:11.01:11,0,101	0/0:17,1:18:25.07:0,25,497	0/0:21,0:21:57.13:0,57,619	0/0:20,0:20:51.14:0,51,564	0/0:15,0:15:42.11:0,42,465
chr10	1617643	.	A	AAG	852.06	PASS	AB=0.843;AC=12;AF=0.214;AN=56;BaseQRankSum=10.272;DP=575;FS=10.597;HRun=0;HaplotypeScore=83.4580;InbreedingCoeff=-0.2723;MQ=76.79;MQ0=0;MQRankSum=-7.340;QD=3.22;ReadPosRankSum=-3.725;VQSLOD=-0.1865;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:90.28:0,90,1337	0/1:3,3:6:94.19:94,0,122	0/1:13,1:14:32.02:32,0,412	0/1:20,1:21:26.63:27,0,479	0/0:23,0:23:63.21:0,63,964	0/0:22,1:23:16.21:0,16,938	0/1:13,3:16:73.08:73,0,404	0/1:22,14:36:99:322,0,768	0/0:14,0:14:39.13:0,39,597	0/1:24,4:28:29.39:29,0,988	0/1:15,6:21:59.52:60,0,549	0/0:14,1:15:33.10:0,33,486	0/0:16,0:16:48.15:0,48,706	0/0:13,0:13:33.11:0,33,499	0/0:13,0:13:33.07:0,33,479	0/0:25,1:26:75.21:0,75,1067	0/0:28,3:31:31.50:0,32,1187	0/1:14,2:16:14.11:14,0,505	0/1:19,3:22:49.42:49,0,709	0/1:31,5:36:99:111,0,1278	0/0:11,0:11:33.10:0,33,485	0/0:10,0:10:30.10:0,30,459	0/1:23,6:29:99:137,0,911	0/0:18,2:20:51.12:0,51,734	0/1:17,3:20:55.06:55,0,662	0/0:29,0:29:61.25:0,61,1113	0/0:20,0:20:57.13:0,57,806	0/0:15,0:15:45.15:0,45,689
chr10	1618804	.	AC	A	871.33	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.588;DP=573;FS=0.771;HRun=3;HaplotypeScore=52.3258;InbreedingCoeff=0.9971;MQ=63.20;MQ0=1;MQRankSum=-0.887;QD=25.63;ReadPosRankSum=1.309;VQSLOD=2.8954;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,29:34:78.24:966,78,0	0/0:9,0:9:24.08:0,24,345	0/0:22,0:21:60.18:0,60,831	0/0:16,0:16:36.11:0,36,479	0/0:26,0:26:72.24:0,72,1036	0/0:18,0:18:54.18:0,54,776	0/0:15,0:15:45.13:0,45,612	0/0:38,0:38:99:0,114,1641	0/0:11,0:11:33.11:0,33,475	0/0:19,0:19:54.18:0,54,777	0/0:23,0:23:66.20:0,66,927	0/0:16,0:16:45.15:0,45,647	0/0:19,0:19:54.11:0,54,717	0/0:15,0:15:42.12:0,42,576	0/0:24,0:24:66.22:0,66,950	0/0:14,0:13:36.12:0,36,517	0/0:31,0:31:78.19:0,78,1062	0/0:25,0:25:75.25:0,75,1078	0/0:18,0:17:48.16:0,48,689	0/0:22,0:22:66.20:0,66,906	0/0:20,0:20:57.19:0,57,820	0/0:16,0:16:45.15:0,45,648	0/0:19,0:19:54.17:0,54,759	0/0:20,0:20:54.12:0,54,702	0/0:25,0:24:75.24:0,75,1063	0/0:20,0:20:60.19:0,60,847	0/0:27,0:27:78.25:0,78,1102	0/0:11,0:11:33.10:0,33,457
chr10	1618947	.	TA	T	894.13	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.881;DP=492;FS=1.278;HRun=10;HaplotypeScore=46.9825;InbreedingCoeff=0.9599;MQ=72.59;MQ0=0;MQRankSum=-0.329;QD=19.87;ReadPosRankSum=1.997;VQSLOD=4.4723;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,22:23:62.99:547,63,0	0/0:11,0:11:30.08:0,30,331	0/0:15,0:12:19.86:0,20,198	0/0:10,0:10:21.98:0,22,216	0/0:23,0:24:66.01:0,66,711	0/0:20,0:20:60.10:0,60,642	0/0:10,0:10:21.06:0,21,232	0/0:32,0:32:81.19:0,81,879	0/0:9,0:9:24.06:0,24,265	0/0:23,0:23:54.14:0,54,591	0/0:22,0:22:63.17:0,63,697	0/0:21,0:21:54.15:0,54,597	0/0:9,0:9:27.07:0,27,299	0/0:8,0:8:24.06:0,24,265	0/0:25,0:25:57.11:0,57,605	0/0:14,0:14:36.08:0,36,389	1/1:2,20:22:53.99:469,54,0	0/0:13,0:13:27.07:0,27,299	0/0:27,0:27:66.18:0,66,730	0/0:23,1:24:37.10:0,37,622	0/0:4,0:4:9.02:0,9,100	0/0:10,0:10:27.07:0,27,299	0/0:18,0:18:39.11:0,39,431	0/0:12,0:12:36.10:0,36,398	0/0:24,0:24:34.14:0,34,605	0/0:26,0:27:68.99:0,69,728	0/0:20,1:21:31.10:0,31,571	0/0:14,0:14:27.07:0,27,296
chr10	1621610	.	A	ATG	193.28	PASS	AC=12;AF=1.000;AN=12;DP=24;FS=0.000;HRun=0;HaplotypeScore=7.2146;MQ=82.81;MQ0=0;QD=14.87;VQSLOD=2.8783;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	./.	1/1:2,1:3:8.23:99,8,0	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	1/1:1,0:3:2.98:22,3,0	./.	1/1:1,0:1:3.01:45,3,0	./.	./.	./.	1/1:2,0:2:3:25,3,0	./.	./.	1/1:2,0:2:3.01:46,3,0	1/1:2,0:2:3:25,3,0	./.
chr10	1624140	.	TCACA	T	193.32	PASS	AB=0.910;AC=7;AF=0.152;AN=46;BaseQRankSum=2.671;DP=663;FS=20.632;HRun=0;HaplotypeScore=100.9807;InbreedingCoeff=0.3262;MQ=60.13;MQ0=19;MQRankSum=0.851;QD=2.45;ReadPosRankSum=-2.152;VQSLOD=-0.0631;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:37:9.03:0,9,166	1/1:7,0:7:3.01:46,3,0	./.	./.	0/0:15,0:15:8.06:0,8,109	0/0:14,0:14:12.02:0,12,169	0/0:36,0:37:23.42:0,23,328	./.	0/0:27,0:28:23.80:0,24,397	0/0:16,0:16:1.82:0,2,5	./.	0/0:31,0:29:24.05:0,24,447	0/0:22,0:22:38.84:0,39,493	0/0:22,0:22:18.05:0,18,271	0/0:27,0:26:9.03:0,9,178	0/0:25,0:25:33.10:0,33,571	0/1:17,4:21:23.15:126,0,23	0/0:22,0:21:19.46:0,19,268	./.	0/0:17,0:17:11.76:0,12,123	0/0:50,0:50:29.89:0,30,496	0/0:8,0:8:9.03:0,9,208	0/0:17,0:17:18.05:0,18,321	0/0:41,0:41:29.35:0,29,792	0/0:12,0:12:12.51:0,13,214	1/1:20,0:20:2.84:14,3,0	0/1:21,3:23:10.06:83,0,10	0/1:7,0:7:6.50:40,0,7
chr10	1624818	.	GAA	G	912.63	PASS	AB=0.824;AC=5;AF=0.089;AN=56;BaseQRankSum=6.035;DP=529;FS=8.219;HRun=15;HaplotypeScore=62.0985;InbreedingCoeff=0.6228;MQ=55.08;MQ0=30;MQRankSum=2.626;QD=10.74;ReadPosRankSum=4.666;VQSLOD=1.9275;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,30:38:68.37:578,68,0	0/0:6,1:7:18.03:0,18,211	0/0:20,0:3:6.47:0,6,59	0/0:25,0:5:11.02:0,11,67	0/0:18,0:18:31.54:0,32,330	0/0:11,1:12:0.63:0,1,266	0/0:13,0:14:29.37:0,29,314	0/0:25,0:27:45.31:0,45,566	0/0:12,0:12:29.47:0,29,337	0/0:18,0:18:32.57:0,33,386	0/0:24,0:22:42.53:0,43,500	0/0:13,0:14:26.54:0,27,292	0/0:6,0:9:8.50:0,8,181	0/0:9,0:10:17.51:0,18,177	0/0:11,0:11:24.04:0,24,280	0/0:16,1:18:3.65:0,4,328	1/1:12,16:30:58.49:454,58,0	0/0:20,0:19:17.99:0,18,427	0/0:19,0:19:41.41:0,41,386	0/0:20,1:23:15.16:0,15,433	0/0:16,0:14:30.07:0,30,374	0/1:11,1:14:2.20:2,0,162	0/0:24,1:25:21.05:0,21,496	0/0:18,0:20:15.25:0,15,376	0/0:15,1:17:9.15:0,9,364	0/0:15,0:16:17.91:0,18,286	0/0:21,1:24:28.91:0,29,531	0/0:17,0:15:20.99:0,21,335
chr10	1626133	.	TTGTTTGTA	T	492.87	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=3.163;DP=768;FS=12.059;HRun=0;HaplotypeScore=197.2596;InbreedingCoeff=0.6424;MQ=60.52;MQ0=3;MQRankSum=-1.334;QD=8.96;ReadPosRankSum=-0.423;VQSLOD=1.6865;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:33,5:38:62.85:586,63,0	0/0:15,0:15:41.06:0,41,1471	0/0:14,0:10:21.01:0,21,232	0/0:6,0:5:8.60:0,9,103	0/0:26,0:26:78.18:0,78,2319	0/0:15,0:15:42.11:0,42,1304	0/0:25,0:25:72.11:0,72,1646	0/0:28,0:25:62.57:0,63,563	0/0:31,0:31:26.17:0,26,414	0/0:39,0:39:99:0,114,3173	0/0:23,0:23:41.06:0,41,1645	0/0:30,0:30:87.19:0,87,1834	0/0:35,0:35:96.17:0,96,2524	0/0:28,0:28:84.19:0,84,2331	0/0:42,0:42:99:0,123,3161	0/0:29,0:29:87.21:0,87,2468	0/1:17,0:17:7.89:8,0,289	0/0:6,0:6:15.02:0,15,366	0/0:37,0:37:99:0,105,2062	0/0:37,0:37:99:0,105,3236	0/0:31,0:31:90.14:0,90,2000	0/0:30,0:30:83.43:0,83,869	0/0:26,0:26:75.12:0,75,1751	0/0:19,0:19:52.30:0,52,1135	0/0:38,0:38:99:0,114,3692	0/0:29,0:29:80.48:0,80,1653	0/0:49,0:49:99:0,141,4093	0/0:25,0:25:72.10:0,72,1299
chr10	1626225	.	ACTAT	A	1055.53	PASS	AB=0.969;AC=9;AF=0.173;AN=52;BaseQRankSum=6.897;DP=759;FS=3.521;HRun=0;HaplotypeScore=124.8713;InbreedingCoeff=0.4839;MQ=57.45;MQ0=5;MQRankSum=-0.801;QD=6.68;ReadPosRankSum=-0.302;VQSLOD=2.7399;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:2,0:28:1.83:0,2,5	0/0:9,0:9:12.04:0,12,280	./.	./.	1/1:10,21:30:24.08:368,24,0	0/0:29,0:29:54.17:0,54,1191	0/0:20,0:20:12.04:0,12,280	0/0:37,0:33:2.98:0,3,21	0/0:32,1:33:5.23:0,5,1045	0/0:38,0:39:26.25:0,26,1493	0/0:28,0:28:45.15:0,45,979	0/0:39,0:39:60.21:0,60,1291	0/0:34,0:34:51.15:0,51,1121	0/0:26,0:26:36.12:0,36,818	0/0:38,0:38:57.18:0,57,1235	0/0:38,0:38:1.65:0,2,869	0/0:14,0:14:24.08:0,24,528	0/1:17,1:18:11.83:12,0,439	0/0:18,0:18:15.05:0,15,350	0/0:36,0:36:51.15:0,51,1142	0/1:25,0:25:12.81:13,0,524	0/0:31,0:31:51.16:0,51,1145	1/1:11,9:20:21.07:322,21,0	1/1:5,13:19:30.10:460,30,0	0/0:27,0:42:19.71:0,20,258	0/0:26,0:26:42.14:0,42,924	0/1:40,2:42:31.73:32,0,1097	0/0:25,0:25:30.10:0,30,674
chr10	1627203	.	CA	C	5128.07	PASS	AB=0.943;AC=50;AF=0.962;AN=52;BaseQRankSum=-5.543;DP=275;FS=8.312;HRun=1;HaplotypeScore=30.3474;InbreedingCoeff=0.0340;MQ=63.00;MQ0=16;MQRankSum=-1.335;QD=18.65;ReadPosRankSum=3.769;VQSLOD=4.5781;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,10:13:21.07:291,21,0	./.	0/1:55,2:17:6.28:6,0,276	0/1:52,5:15:99:175,0,232	1/1:0,4:4:9.03:124,9,0	1/1:2,6:7:18.06:251,18,0	1/1:0,8:8:12.04:167,12,0	1/1:0,14:14:38.23:471,38,0	1/1:0,7:7:18.02:229,18,0	1/1:0,2:2:6.02:84,6,0	./.	1/1:1,10:11:24.97:336,25,0	1/1:0,6:6:18.06:246,18,0	1/1:0,3:3:9.03:125,9,0	1/1:0,5:5:15.05:209,15,0	1/1:0,5:5:15.05:209,15,0	1/1:0,7:7:18.06:251,18,0	1/1:1,9:10:15.05:209,15,0	1/1:2,0:2:6.02:83,6,0	1/1:0,5:5:9.03:125,9,0	1/1:3,9:10:26.82:343,27,0	1/1:0,5:5:15.05:209,15,0	1/1:0,4:4:12.04:166,12,0	1/1:0,13:12:21.07:293,21,0	1/1:2,3:4:8.77:125,9,0	1/1:0,5:5:15.03:191,15,0	1/1:0,4:4:9.03:126,9,0	1/1:1,2:2:6.02:84,6,0
chr10	1629103	.	AAAGG	A	824.84	PASS	AB=0.864;AC=9;AF=0.173;AN=52;BaseQRankSum=6.948;DP=559;FS=16.973;HRun=0;HaplotypeScore=99.5376;InbreedingCoeff=0.5102;MQ=55.82;MQ0=16;MQRankSum=-0.140;QD=7.50;ReadPosRankSum=2.114;VQSLOD=1.0220;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:53.95:0,54,1041	0/0:6,0:8:4.57:0,5,56	./.	./.	0/0:22,0:22:33.10:0,33,677	0/0:12,0:12:21.07:0,21,463	0/0:20,0:20:24:0,24,431	0/0:27,0:21:3.87:0,4,55	0/0:18,0:19:16.20:0,16,172	0/0:21,0:21:33.07:0,33,687	0/0:14,0:14:24.08:0,24,561	0/0:26,0:25:36.08:0,36,775	0/0:19,0:18:39.13:0,39,858	0/0:18,0:18:33.06:0,33,646	0/0:23,0:22:27.74:0,28,771	0/0:15,0:14:18.06:0,18,424	0/0:33,0:32:42.03:0,42,733	0/0:14,0:14:21.07:0,21,422	0/0:27,0:23:18.06:0,18,350	0/0:9,0:9:12.01:0,12,233	0/0:22,0:22:42.11:0,42,824	0/1:21,0:21:13.50:14,0,580	1/1:4,9:13:15.05:234,15,0	1/1:12,20:32:27.09:420,27,0	0/0:22,0:22:30.99:0,31,709	0/1:8,0:26:84.94:196,0,85	1/1:8,0:11:8.59:82,9,0	0/1:5,0:4:28.59:29,0,42
chr10	1629148	.	A	AAGGA	303.04	PASS	AB=1.000;AC=9;AF=0.173;AN=52;BaseQRankSum=3.873;DP=548;FS=3.737;HRun=0;HaplotypeScore=111.9005;InbreedingCoeff=0.5997;MQ=50.72;MQ0=22;MQRankSum=-2.560;QD=3.61;ReadPosRankSum=-1.613;VQSLOD=1.9201;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:30:27.08:0,27,519	1/1:7,0:8:1.77:132,2,0	./.	./.	0/0:15,0:15:27.08:0,27,393	0/0:18,0:18:20.62:0,21,299	0/0:26,0:24:18.04:0,18,237	1/1:17,0:8:0.45:1,0,0	1/1:16,4:22:11.77:212,12,0	0/0:23,0:22:30.09:0,30,423	0/0:21,0:20:24.08:0,24,369	0/0:22,0:21:33.11:0,33,489	0/0:22,0:22:38.35:0,38,539	0/0:17,0:17:27.07:0,27,373	0/0:23,0:24:36.05:0,36,484	0/0:17,0:17:18.73:0,19,281	0/0:23,0:22:33.11:0,33,503	0/0:15,0:15:19.24:0,19,242	0/0:18,0:13:15.03:0,15,192	0/0:8,0:8:9.03:0,9,139	0/0:33,0:33:36.04:0,36,497	0/0:19,0:19:16.99:0,17,342	0/0:17,0:17:14.15:0,14,118	0/0:29,0:29:26.86:0,27,227	0/0:24,0:24:29.38:0,29,459	0/1:25,0:25:67.36:67,0,180	0/0:11,0:9:8:0,8,53	1/1:12,0:12:1.82:5,2,0
chr10	1629166	.	GGAAGGCAGGAAGGAAGGAGA	G	32.37	PASS	AB=0.806;AC=2;AF=0.036;AN=56;BaseQRankSum=7.464;DP=597;FS=15.268;HRun=0;HaplotypeScore=304.0097;InbreedingCoeff=0.1012;MQ=50.79;MQ0=22;MQRankSum=-7.177;QD=0.74;ReadPosRankSum=-4.358;VQSLOD=0.4528;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:24:18.52:19,0,530	0/0:10,0:10:13.36:0,13,1036	0/0:32,0:1:0.89:0,1,2	0/0:25,0:2:2.74:0,3,17	0/0:16,0:16:45.04:0,45,1252	0/0:17,0:16:42.10:0,42,1583	0/0:29,0:27:30.90:0,31,1647	0/0:10,0:5:11.89:0,12,99	0/0:20,0:20:53.66:0,54,1885	0/0:26,0:26:72.31:0,72,2313	0/0:22,0:21:60.12:0,60,2164	0/0:20,0:19:50.37:0,50,1440	0/0:21,0:21:53.93:0,54,1185	0/0:18,0:18:21.19:0,21,1531	0/0:24,0:24:48.54:0,49,1755	0/0:18,0:18:36.17:0,36,1549	0/1:7,12:19:41.07:101,0,41	0/0:18,0:18:13.86:0,14,1440	0/0:18,0:13:29.99:0,30,839	0/0:9,0:9:12.37:0,12,685	0/0:50,0:50:99:0,121,4260	0/0:17,0:17:40.46:0,40,1055	0/0:23,0:23:59.95:0,60,1824	0/0:30,0:30:60.20:0,60,1696	0/0:28,0:28:80.67:0,81,3035	0/0:28,0:28:74.48:0,74,2092	0/0:11,0:9:20.83:0,21,780	0/0:13,0:12:36.11:0,36,1692
chr10	1629247	.	GGA	G	124.16	PASS	AB=0.986;AC=12;AF=0.214;AN=56;BaseQRankSum=7.051;DP=422;FS=22.666;HRun=0;HaplotypeScore=170.1314;InbreedingCoeff=-0.1176;MQ=52.83;MQ0=7;MQRankSum=-6.840;QD=0.67;ReadPosRankSum=-3.014;VQSLOD=0.4026;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:15,1:14:26.72:0,27,414	0/1:7,0:7:15.61:16,0,262	0/0:19,0:8:14.52:0,15,164	0/0:17,0:10:8.29:0,8,166	0/0:10,0:10:19.62:0,20,290	0/0:16,0:15:45.15:0,45,799	0/1:24,0:24:7.59:8,0,707	0/0:11,1:11:9.49:0,9,258	0/0:18,0:17:48.15:0,48,812	0/1:17,1:16:58.13:58,0,535	0/0:6,0:6:8.22:0,8,86	0/0:18,0:18:41.72:0,42,746	0/0:16,1:16:2.87:0,3,532	0/1:20,0:20:39.33:39,0,462	0/1:11,0:10:10.45:10,0,228	0/0:20,0:19:17.31:0,17,666	1/1:4,3:6:4.23:26,4,0	0/0:9,0:9:24.07:0,24,351	0/0:15,0:13:38.19:0,38,557	0/1:10,1:9:5.03:5,0,215	0/1:45,0:44:42.85:43,0,623	0/1:8,0:8:18.13:18,0,296	0/1:8,0:8:6.11:6,0,311	0/1:26,0:26:37.48:37,0,670	0/0:13,0:13:33.09:0,33,541	0/0:20,0:20:21.34:0,21,714	0/0:6,0:5:12.04:0,12,222	0/0:5,0:5:9.03:0,9,167
chr10	1629341	.	GA	G	5033.14	PASS	AB=0.760;AC=27;AF=0.482;AN=56;BaseQRankSum=14.696;DP=731;FS=15.117;HRun=3;HaplotypeScore=150.4357;InbreedingCoeff=-0.6473;MQ=49.54;MQ0=9;MQRankSum=-12.502;QD=7.90;ReadPosRankSum=1.321;VQSLOD=1.1422;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,21:21:53.80:624,54,0	0/1:4,5:9:89.67:90,0,139	0/0:37,0:9:20.82:0,21,226	0/1:26,1:8:9.66:10,0,26	0/1:26,11:36:99:289,0,648	0/1:15,6:20:88.80:89,0,510	0/1:25,12:35:99:249,0,807	0/1:18,14:30:99:420,0,382	0/1:25,4:29:66.44:66,0,913	0/1:16,17:33:99:360,0,540	0/1:12,7:18:99:194,0,299	0/1:25,12:34:99:295,0,703	0/1:23,11:34:99:140,0,801	0/1:20,6:26:45.61:46,0,769	0/1:26,13:37:99:368,0,788	0/1:17,8:25:99:199,0,544	1/1:5,3:7:10.21:97,10,0	0/1:13,4:17:99:125,0,385	0/1:11,4:13:35.08:35,0,373	0/1:7,7:14:99:106,0,251	0/0:45,3:47:15.70:0,16,1047	0/1:16,12:27:99:272,0,495	0/1:19,10:29:99:264,0,536	0/1:16,6:22:65.29:65,0,337	0/1:21,11:31:99:224,0,693	0/1:18,11:29:99:260,0,577	0/1:12,4:16:99:147,0,363	0/0:9,0:9:27.09:0,27,387
chr10	1629360	.	AG	A	193.63	PASS	AB=0.667;AC=1;AF=0.018;AN=56;BaseQRankSum=4.945;DP=781;FS=1.953;HRun=4;HaplotypeScore=169.7003;InbreedingCoeff=0.5042;MQ=54.46;MQ0=9;MQRankSum=-2.162;QD=13.83;ReadPosRankSum=-1.582;VQSLOD=1.7932;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:31:87.17:0,87,1137	0/0:12,0:12:30.10:0,30,411	0/0:43,0:13:9.81:0,10,232	0/0:34,0:12:16.77:0,17,235	0/0:38,0:37:81.50:0,81,1062	0/0:20,0:19:31.30:0,31,646	0/0:41,0:39:94.35:0,94,1137	0/0:31,0:30:74.17:0,74,830	0/0:32,0:32:83.07:0,83,1113	0/0:28,0:28:62.70:0,63,721	0/0:18,0:17:18.59:0,19,393	0/0:34,0:33:86.36:0,86,1051	0/0:30,0:30:67.31:0,67,933	0/0:28,0:28:81.27:0,81,1114	0/0:36,0:36:99:0,100,1229	0/0:23,1:24:56.85:0,57,775	0/1:7,7:13:1.85:268,0,2	0/0:18,0:18:51.11:0,51,667	0/0:19,0:17:42.58:0,43,553	0/0:17,0:17:43.09:0,43,516	0/0:53,0:54:99:0,127,1574	0/0:29,0:28:65.99:0,66,786	0/0:29,0:29:70.11:0,70,946	0/0:24,0:24:43.46:0,43,532	0/0:36,0:36:78.34:0,78,938	0/0:29,0:29:71.12:0,71,935	0/0:21,0:21:54.24:0,54,638	0/0:10,0:10:29.82:0,30,371
chr10	1631171	.	C	CA	505.83	PASS	AB=0.926;AC=5;AF=0.089;AN=56;BaseQRankSum=1.489;DP=599;FS=12.742;HRun=11;HaplotypeScore=77.4936;InbreedingCoeff=0.3067;MQ=69.27;MQ0=6;MQRankSum=0.431;QD=4.32;ReadPosRankSum=-0.954;VQSLOD=0.0999;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:20:31.91:0,32,294	0/0:9,0:9:23.89:0,24,186	0/1:46,0:25:22.23:22,0,102	0/0:35,0:28:24.21:0,24,129	0/0:29,0:31:69.77:0,70,520	0/1:22,3:26:23.23:23,0,297	0/0:13,0:13:28.11:0,28,210	0/0:23,1:24:4.65:0,5,353	0/0:21,0:20:20.22:0,20,330	0/0:27,0:27:50.73:0,51,394	0/0:16,0:17:43.85:0,44,330	0/0:16,0:16:35.81:0,36,275	0/0:24,0:26:54.70:0,55,392	0/0:20,0:21:22.16:0,22,310	0/0:23,0:23:65.74:0,66,509	0/0:15,0:17:45.88:0,46,332	1/1:2,23:29:50.92:558,51,0	0/0:11,0:13:28.89:0,29,210	0/0:21,0:24:53.39:0,53,381	0/0:21,0:22:52.84:0,53,400	0/0:15,0:15:11.50:0,12,271	0/1:13,2:15:25.03:25,0,195	0/0:17,0:19:42.88:0,43,313	0/0:19,0:19:47.82:0,48,371	0/0:19,0:19:17.31:0,17,277	0/0:20,0:20:41.77:0,42,325	0/0:22,0:22:56.73:0,57,438	0/0:8,0:8:20.92:0,21,163
chr10	1631419	.	CAAA	C	993.80	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=4.521;DP=527;FS=0.000;HRun=11;HaplotypeScore=79.3234;InbreedingCoeff=0.9201;MQ=64.28;MQ0=2;MQRankSum=-0.705;QD=22.59;ReadPosRankSum=3.494;VQSLOD=2.2778;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,18:22:25.49:563,25,0	0/0:7,0:7:18.06:0,18,348	0/0:20,0:10:12.46:0,12,122	0/0:17,0:12:8.24:0,8,170	0/0:19,0:22:65.87:0,66,1213	0/0:22,0:22:57.16:0,57,1059	0/0:17,0:18:48.14:0,48,825	0/0:16,0:18:39.07:0,39,567	0/0:0,0:7:9.03:0,9,130	0/0:23,0:25:57.60:0,58,983	0/0:18,0:21:51.11:0,51,882	0/0:13,0:13:33.10:0,33,565	0/0:12,0:13:34.34:0,34,589	0/0:17,0:17:42.11:0,42,754	0/0:24,0:24:66.16:0,66,1175	0/0:19,0:19:57.20:0,57,1122	1/1:4,18:22:42.12:551,42,0	0/0:14,0:14:29.61:0,30,436	0/0:16,0:18:50.81:0,51,850	0/0:23,0:24:63.06:0,63,964	0/0:10,0:10:30.09:0,30,541	0/0:14,0:14:33.09:0,33,581	0/0:23,0:23:65.89:0,66,1179	0/0:14,0:14:33.09:0,33,582	0/0:18,0:19:48.14:0,48,855	0/0:26,0:28:70.43:0,70,1202	0/0:40,0:40:99:0,105,1844	0/0:13,0:14:33.11:0,33,619
chr10	1631590	.	AAC	A	244.02	PASS	AB=0.916;AC=13;AF=0.250;AN=52;BaseQRankSum=4.303;DP=422;FS=7.793;HRun=0;HaplotypeScore=56.7748;InbreedingCoeff=-0.3323;MQ=79.96;MQ0=6;MQRankSum=1.297;QD=1.30;ReadPosRankSum=0.276;VQSLOD=0.0923;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:20,0:20:18.12:40,0,18	0/0:9,0:9:8.96:0,9,107	./.	./.	0/1:16,1:17:8.69:9,0,285	0/0:21,0:21:23.32:0,23,272	0/1:10,6:16:43.90:82,0,44	0/0:28,0:28:13.08:0,13,81	0/0:7,0:8:17.83:0,18,228	0/0:15,0:15:3.01:0,3,44	0/0:13,0:13:8.86:0,9,99	0/1:7,0:7:11.67:12,0,100	0/1:8,0:9:2.20:2,0,55	0/1:7,0:7:7.12:7,0,39	0/0:8,0:8:12.02:0,12,154	0/0:13,0:12:12.02:0,12,156	0/1:16,0:16:12.05:44,0,12	0/1:13,2:15:43.76:44,0,201	0/1:10,0:10:13.92:14,0,67	0/0:15,0:15:21.02:0,21,249	0/0:11,0:10:14.88:0,15,185	0/0:4,0:4:3.01:0,3,44	0/0:14,0:14:18.04:0,18,246	0/0:15,0:15:17.80:0,18,216	0/1:20,2:22:31.78:32,0,283	0/1:16,2:17:49.78:50,0,101	0/1:15,5:20:11.64:12,0,122	0/1:8,2:10:36.39:36,0,201
chr10	1632160	.	GA	G	226.22	PASS	AB=0.875;AC=5;AF=0.089;AN=56;BaseQRankSum=4.135;DP=395;FS=11.727;HRun=10;HaplotypeScore=48.3186;InbreedingCoeff=0.6786;MQ=87.97;MQ0=0;MQRankSum=-1.836;QD=8.70;ReadPosRankSum=2.812;VQSLOD=0.6645;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,13:13:29.99:260,30,0	0/0:9,0:9:24.06:0,24,266	0/0:31,0:27:55.50:0,55,460	0/0:21,0:14:20.47:0,20,144	0/0:25,1:26:46.12:0,46,720	0/0:16,0:16:45.10:0,45,483	0/0:5,0:5:12.03:0,12,133	0/0:34,1:35:61.17:0,61,889	0/0:11,0:11:30.06:0,30,316	0/0:19,0:19:54.08:0,54,582	0/0:17,0:17:42.08:0,42,447	0/0:8,0:8:14.89:0,15,134	0/0:11,0:11:33.07:0,33,356	0/0:7,0:7:21.06:0,21,232	0/0:11,0:11:30.06:0,30,322	0/0:13,0:13:33.09:0,33,365	1/1:1,5:6:8.99:78,9,0	0/0:14,0:14:36.07:0,36,387	0/0:21,0:21:45.10:0,45,484	0/0:14,0:14:36.10:0,36,398	0/0:3,0:3:9.01:0,9,92	0/1:6,1:7:5:5,0,178	0/0:14,0:14:36.09:0,36,391	0/0:11,0:11:24.06:0,24,265	0/0:10,0:10:27.05:0,27,278	0/0:9,0:9:27.07:0,27,299	0/0:22,0:22:51.14:0,51,564	0/0:9,1:10:1.02:0,1,239
chr10	1635582	.	C	CT	513.42	PASS	AB=0.938;AC=3;AF=0.054;AN=56;BaseQRankSum=-3.513;DP=464;FS=4.026;HRun=10;HaplotypeScore=48.0658;InbreedingCoeff=0.6664;MQ=74.17;MQ0=0;MQRankSum=1.236;QD=12.84;ReadPosRankSum=0.091;VQSLOD=3.0550;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:50.89:0,51,412	0/0:4,0:4:8.99:0,9,74	0/0:13,0:12:10.55:0,11,115	0/1:13,1:15:1.55:2,0,85	0/0:31,0:31:68.89:0,69,563	0/0:21,0:21:62.87:0,63,508	0/0:6,0:6:14.96:0,15,119	0/0:30,0:30:62.84:0,63,508	0/0:19,0:19:47.92:0,48,394	0/0:18,0:18:41.91:0,42,342	0/0:27,0:27:56.65:0,57,455	0/0:10,0:10:20.96:0,21,172	0/0:7,0:7:17.98:0,18,148	0/0:13,0:13:35.96:0,36,295	0/0:15,0:15:41.62:0,42,329	0/0:13,0:13:32.94:0,33,268	1/1:4,21:25:57.14:608,57,0	0/0:11,0:11:19.91:0,20,233	0/0:21,0:21:53.93:0,54,443	0/0:31,0:31:83.15:0,83,657	0/0:6,0:6:14.95:0,15,116	0/0:5,0:5:14.98:0,15,123	0/0:14,0:14:38.95:0,39,320	0/0:7,0:7:17.97:0,18,148	0/0:21,0:21:50.91:0,51,419	0/0:19,0:19:47.92:0,48,392	0/0:17,0:17:49.98:0,50,400	0/0:25,0:25:65.92:0,66,542
chr10	1641300	.	G	GAA	250.05	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=1.062;DP=692;FS=4.404;HRun=10;HaplotypeScore=87.9630;InbreedingCoeff=0.9762;MQ=63.68;MQ0=0;MQRankSum=-0.732;QD=10.00;ReadPosRankSum=-1.770;VQSLOD=1.2195;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,15:25:28.91:344,29,0	0/0:16,0:16:32.86:0,33,387	0/0:11,0:10:18.47:0,18,169	0/0:15,0:15:26.48:0,26,239	0/0:30,0:30:56.15:0,56,729	0/0:20,0:20:45.07:0,45,457	0/0:25,0:24:56.82:0,57,556	0/0:29,0:29:37.76:0,38,554	0/0:25,0:25:66.14:0,66,669	0/0:31,0:31:68.29:0,68,678	0/0:31,0:32:64.12:0,64,683	0/0:24,0:24:66.14:0,66,670	0/0:30,0:30:75.12:0,75,755	0/0:19,0:22:41.80:0,42,472	0/0:42,0:41:99:0,111,1128	0/0:33,0:33:90.14:0,90,900	0/0:34,0:35:92.78:0,93,900	0/0:10,0:12:23.53:0,24,278	0/0:11,0:10:20.76:0,21,207	0/0:29,0:30:37.02:0,37,651	0/0:23,0:23:69.13:0,69,693	0/0:24,0:24:69.11:0,69,688	0/0:31,0:31:72.05:0,72,719	0/0:18,0:19:41.76:0,42,466	0/0:27,0:27:59.79:0,60,661	0/0:32,0:31:77.98:0,78,776	0/0:27,0:29:68.62:0,69,674	0/0:6,0:6:18.04:0,18,183
chr10	1643621	.	A	AAAAAGTGGG	631.52	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=2.447;DP=660;FS=24.356;HRun=0;HaplotypeScore=170.1322;InbreedingCoeff=0.3647;MQ=62.95;MQ0=1;MQRankSum=-3.956;QD=7.80;ReadPosRankSum=0.394;VQSLOD=0.7597;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:35,0:35:2.22:2,0,2052	0/0:4,0:4:12.04:0,12,360	0/0:30,0:20:45.69:0,46,1510	0/0:23,0:21:57.07:0,57,1350	0/0:44,0:44:99:0,126,3571	0/0:21,0:21:54.17:0,54,1539	0/0:13,0:13:36.12:0,36,1031	0/0:33,0:33:96.29:0,96,2568	0/0:30,0:30:78.24:0,78,2113	0/0:27,0:27:75.26:0,75,2239	0/0:36,0:36:99:0,102,3064	0/0:26,0:26:60.21:0,60,1685	0/0:31,0:31:66.12:0,66,1981	0/0:9,0:9:27.09:0,27,811	0/0:26,0:26:72.25:0,72,2122	0/0:32,0:32:78.27:0,78,2265	1/1:5,7:10:15.05:672,15,0	0/1:21,0:21:20.02:20,0,1302	0/0:18,0:18:54.17:0,54,1410	0/0:27,0:27:75.22:0,75,2058	0/0:18,0:18:51.18:0,51,1503	0/0:20,0:20:54.15:0,54,1390	0/0:15,0:15:45.13:0,45,1187	0/1:11,0:11:50.60:51,0,627	0/0:15,0:15:45.14:0,45,1267	0/0:29,0:29:81.28:0,81,2361	0/0:28,0:28:72.22:0,72,2073	0/0:24,0:24:69.24:0,69,2071
chr10	1645818	.	GTGCTA	G	67.33	PASS	AC=2;AF=0.038;AN=52;BaseQRankSum=2.943;DP=600;FS=0.000;HRun=0;HaplotypeScore=109.8727;InbreedingCoeff=0.9358;MQ=55.11;MQ0=12;MQRankSum=-2.790;QD=13.47;ReadPosRankSum=-0.316;VQSLOD=2.9568;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,4:5:9.03:150,9,0	0/0:9,0:9:27.09:0,27,898	./.	./.	0/0:21,0:20:57.20:0,57,1896	0/0:28,0:28:78.27:0,78,2544	0/0:16,0:15:42.14:0,42,1351	0/0:40,0:33:96.30:0,96,2841	0/0:27,0:26:78.27:0,78,2565	0/0:38,0:38:99:0,114,3735	0/0:26,0:26:72.25:0,72,2374	0/0:20,0:20:54.19:0,54,1775	0/0:21,0:21:60.21:0,60,1925	0/0:18,0:18:48.16:0,48,1594	0/0:26,0:26:69.24:0,69,2240	0/0:20,0:20:60.19:0,60,1881	0/0:18,0:16:45.13:0,45,1360	0/0:17,0:16:45.15:0,45,1417	0/0:20,0:13:39.13:0,39,1217	0/0:32,0:32:93.32:0,93,3050	0/0:24,0:23:63.22:0,63,2036	0/0:20,0:20:60.21:0,60,1958	0/0:36,0:36:99:0,105,3447	0/0:23,0:23:66.23:0,66,2068	0/0:30,0:29:90.31:0,90,2920	0/0:29,0:29:87.30:0,87,2876	0/0:22,0:22:66.20:0,66,2064	0/0:8,0:8:24.08:0,24,799
chr10	1647579	.	T	TG	691.90	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-2.131;DP=564;FS=14.479;HRun=0;HaplotypeScore=72.0372;InbreedingCoeff=0.7422;MQ=54.98;MQ0=11;MQRankSum=-2.341;QD=20.35;ReadPosRankSum=2.614;VQSLOD=4.3556;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:32:83.89:0,84,868	0/0:16,0:14:35.99:0,36,363	0/0:23,0:10:11.34:0,11,142	0/0:17,0:8:10.36:0,10,111	0/0:28,0:27:65.34:0,65,672	0/0:20,0:20:42.49:0,42,498	0/0:16,0:16:26.84:0,27,295	0/0:21,0:20:56.53:0,57,483	0/0:8,0:8:1.14:0,1,40	0/0:24,0:23:61.90:0,62,638	0/0:23,0:23:57.05:0,57,552	0/0:13,0:13:32.98:0,33,368	0/0:9,0:9:26.93:0,27,259	0/0:16,0:16:38.99:0,39,448	0/0:27,0:26:75.07:0,75,811	0/0:24,0:24:59.72:0,60,653	1/1:3,30:33:34.71:786,35,0	0/0:17,0:14:30.02:0,30,341	0/0:10,0:10:26.99:0,27,273	0/0:26,0:26:68.40:0,68,687	0/0:18,0:17:32.92:0,33,290	0/0:23,0:23:56.43:0,56,611	0/0:27,0:27:60.02:0,60,639	0/0:16,0:15:19.35:0,19,202	0/0:22,0:22:59.85:0,60,694	0/0:19,0:18:45.42:0,45,484	0/0:26,0:26:69.57:0,70,763	0/0:8,0:8:13.47:0,13,163
chr10	1648601	.	CT	C	610.38	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=6.566;DP=634;FS=7.459;HRun=9;HaplotypeScore=69.1405;InbreedingCoeff=0.6662;MQ=71.53;MQ0=0;MQRankSum=-1.588;QD=13.56;ReadPosRankSum=0.096;VQSLOD=3.2246;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,26:33:77.98:705,78,0	0/0:10,0:10:24.05:0,24,258	0/1:12,0:9:3.13:3,0,185	0/0:20,0:18:5.05:0,5,110	0/0:13,0:13:39.12:0,39,450	0/0:23,0:23:66.19:0,66,751	0/0:18,0:18:48.08:0,48,528	0/0:50,0:50:99:0,120,1384	0/0:17,0:17:21:0,21,482	0/0:22,0:22:61.42:0,61,694	0/0:21,0:21:57.04:0,57,621	0/0:24,0:24:54.16:0,54,623	0/0:21,0:21:54.09:0,54,605	0/0:22,0:22:60.17:0,60,680	0/0:36,0:36:96.28:0,96,1105	0/0:35,0:35:96.20:0,96,1078	0/0:29,0:29:75.22:0,75,865	0/0:17,0:17:45.05:0,45,502	0/0:20,0:20:51.14:0,51,580	0/0:29,0:29:75.21:0,75,855	0/0:11,0:11:27.08:0,27,312	0/0:15,0:15:39.10:0,39,440	0/0:22,0:22:57.17:0,57,658	0/0:17,0:17:42.06:0,42,441	0/0:24,0:24:69.15:0,69,764	0/0:24,1:25:64.73:0,65,722	0/0:34,0:34:96.27:0,96,1097	0/0:14,0:14:33.94:0,34,356
chr10	1651587	.	G	GAGA	2652.21	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-6.763;DP=570;FS=15.876;HRun=0;HaplotypeScore=81.5256;InbreedingCoeff=0.9842;MQ=61.92;MQ0=1;MQRankSum=-0.802;QD=42.78;ReadPosRankSum=2.130;VQSLOD=3.9519;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,29:38:75.13:1516,75,0	0/0:8,0:8:21.07:0,21,338	0/0:18,0:15:30.14:0,30,595	0/0:19,0:18:42.11:0,42,626	0/0:22,0:22:53.60:0,54,867	0/0:20,0:20:51.16:0,51,814	0/0:20,0:20:54.18:0,54,868	0/0:32,0:32:84.26:0,84,1304	0/0:23,0:23:66.22:0,66,1058	0/0:16,0:16:39.11:0,39,564	0/0:12,0:12:30.03:0,30,482	0/0:29,0:29:78.27:0,78,1247	0/0:18,0:18:51.17:0,51,817	0/0:21,0:21:60.20:0,60,955	0/0:29,0:29:87.27:0,87,1350	0/0:23,0:23:66.20:0,66,1034	1/1:3,21:24:57.20:1258,57,0	0/0:15,0:15:42.14:0,42,671	0/0:22,0:22:54.18:0,54,859	0/0:9,0:9:24.07:0,24,362	0/0:36,0:36:90.20:0,90,1389	0/0:11,0:11:24.06:0,24,386	0/0:17,0:17:36.05:0,36,579	0/0:33,0:33:87.28:0,87,1371	0/0:8,0:8:14.19:0,14,215	0/0:13,0:13:30.10:0,30,482	0/0:25,0:25:72.22:0,72,1108	0/0:8,0:8:24.05:0,24,337
chr10	1652073	.	CT	C	467.38	PASS	AB=0.858;AC=4;AF=0.071;AN=56;BaseQRankSum=6.784;DP=614;FS=0.650;HRun=11;HaplotypeScore=60.4620;InbreedingCoeff=0.4574;MQ=63.22;MQ0=0;MQRankSum=-0.570;QD=10.16;ReadPosRankSum=-0.400;VQSLOD=2.5143;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:38:90.47:0,90,916	0/0:13,0:13:39.10:0,39,416	0/1:8,3:11:31.26:54,0,31	0/1:10,1:11:7.12:7,0,115	0/0:31,0:32:90.02:0,90,922	0/0:13,1:14:14.45:0,14,359	0/0:18,0:18:51.13:0,51,544	0/0:34,0:35:96.02:0,96,981	0/0:18,0:18:45.11:0,45,480	0/0:18,0:19:35.92:0,36,366	0/0:35,0:35:90.22:0,90,951	0/0:14,1:15:11.44:0,11,320	0/0:22,0:22:56.92:0,57,581	0/0:22,1:23:38.48:0,38,565	0/0:23,2:25:13.88:0,14,559	0/0:23,1:24:35.51:0,36,583	1/1:2,21:23:62.93:517,63,0	0/0:14,0:14:30.06:0,30,313	0/0:23,0:23:51.09:0,51,531	0/0:24,0:25:59.98:0,60,622	0/0:14,0:14:39.09:0,39,409	0/0:9,0:9:24.06:0,24,256	0/0:30,1:32:65.41:0,65,885	0/0:9,0:9:24.06:0,24,256	0/0:28,2:30:19.09:0,19,642	0/0:40,0:43:99:0,105,1086	0/0:30,0:30:72.14:0,72,754	0/0:6,0:6:15.04:0,15,160
chr10	1654133	.	A	AAC	875.71	PASS	AB=0.862;AC=11;AF=0.212;AN=52;BaseQRankSum=-2.068;DP=662;FS=0.000;HRun=0;HaplotypeScore=107.8491;InbreedingCoeff=-0.0362;MQ=67.40;MQ0=4;MQRankSum=0.879;QD=4.05;ReadPosRankSum=-3.057;VQSLOD=1.9462;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:24:22.35:0,22,131	0/0:7,0:7:15:0,15,146	./.	./.	0/0:20,0:23:50.57:0,51,477	0/0:26,0:30:56.63:0,57,559	0/1:15,0:17:8.12:8,0,210	1/1:27,5:31:14.99:165,15,0	0/1:8,7:16:48.81:155,0,49	0/0:19,0:21:23.72:0,24,222	0/1:22,1:24:3.49:3,0,345	0/0:25,0:26:41.93:0,42,435	0/0:20,0:20:45.12:0,45,499	0/1:17,1:23:0.57:1,0,374	0/0:27,0:27:59.95:0,60,626	0/0:25,0:28:59.35:0,59,541	0/0:10,0:20:25.68:0,26,135	0/0:15,0:15:4.02:0,4,131	0/1:11,0:11:33.52:34,0,60	0/1:17,0:20:33.83:34,0,259	0/0:45,0:45:58.59:0,59,751	0/0:23,0:25:35.90:0,36,366	0/0:25,0:29:50.58:0,51,506	0/0:33,1:35:11.01:0,11,468	0/0:18,0:21:2.52:0,3,294	0/1:15,10:25:99:331,0,107	0/1:20,7:29:50.89:121,0,51	0/1:10,7:17:30.11:164,0,30
chr10	1654197	.	TAC	T	420.26	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.526;DP=882;FS=1.725;HRun=0;HaplotypeScore=144.5331;InbreedingCoeff=0.9674;MQ=58.76;MQ0=3;MQRankSum=-2.754;QD=20.01;ReadPosRankSum=1.434;VQSLOD=4.2340;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:41:97.07:0,97,1511	0/0:10,0:10:24.08:0,24,390	0/0:36,0:17:36.02:0,36,517	0/0:50,0:29:44.84:0,45,813	0/0:29,0:28:75.25:0,75,1238	0/0:31,0:30:71.66:0,72,1182	0/0:25,0:25:69.23:0,69,1158	0/0:52,0:52:99:0,123,1919	0/0:20,0:20:45.12:0,45,705	0/0:29,0:29:83.48:0,83,1332	0/0:28,0:28:78.27:0,78,1321	0/0:41,0:41:99:0,117,1947	0/0:35,0:35:99:0,102,1562	0/0:21,0:21:48.14:0,48,756	0/0:39,0:38:96.29:0,96,1562	0/0:43,0:43:99:0,123,2024	1/1:4,17:21:41.97:515,42,0	0/0:25,0:26:12.22:0,12,939	0/0:11,0:11:24.08:0,24,404	0/0:30,0:30:81.24:0,81,1312	0/0:60,0:58:99:0,132,2218	0/0:32,0:32:84.23:0,84,1371	0/0:34,0:34:93.08:0,93,1531	0/0:45,0:45:99:0,103,1716	0/0:21,0:21:57.16:0,57,890	0/0:35,0:34:87.14:0,87,1313	0/0:20,0:20:49.16:0,49,839	0/0:16,0:16:42.14:0,42,714
chr10	1658795	.	GTAGATAGA	G	1122.13	PASS	AB=0.614;AC=5;AF=0.096;AN=52;BaseQRankSum=7.080;DP=756;FS=19.861;HRun=0;HaplotypeScore=186.7603;InbreedingCoeff=0.6959;MQ=69.84;MQ0=4;MQRankSum=0.196;QD=15.37;ReadPosRankSum=-1.746;VQSLOD=1.4920;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:18.84:0,19,572	0/0:5,0:5:9.03:0,9,221	./.	./.	0/0:21,0:21:41.65:0,42,1107	0/0:30,0:29:57.16:0,57,1196	0/0:31,0:30:42.10:0,42,733	0/0:34,0:34:18.01:0,18,209	0/0:23,0:22:26.98:0,27,558	0/0:23,0:23:48.15:0,48,1286	0/0:24,0:24:48.15:0,48,1275	0/0:29,0:29:62.39:0,62,1502	0/0:28,0:28:39.49:0,39,1424	0/0:25,0:25:51.08:0,51,1289	0/0:47,0:47:81.25:0,81,1854	0/0:40,0:40:72.17:0,72,1534	0/0:28,0:28:5.32:0,5,452	0/0:24,0:24:39.07:0,39,933	0/0:38,0:38:45.99:0,46,1082	0/0:15,0:15:29.72:0,30,563	0/0:33,0:31:64.12:0,64,1657	0/0:14,0:14:31.61:0,32,663	0/0:15,0:15:24.06:0,24,542	0/0:44,0:42:84.23:0,84,2039	0/0:33,0:33:63.21:0,63,1798	0/1:10,17:26:13.55:555,0,14	1/1:8,28:36:24.08:541,24,0	1/1:10,0:10:9.01:147,9,0
chr10	1659893	.	T	TA	811.98	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-5.393;DP=681;FS=2.863;HRun=2;HaplotypeScore=63.0858;InbreedingCoeff=0.9995;MQ=74.08;MQ0=0;MQRankSum=0.296;QD=36.91;ReadPosRankSum=1.200;VQSLOD=4.3314;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,120,1460	0/0:12,0:12:33.05:0,33,381	0/0:16,0:16:42.10:0,42,502	0/0:26,0:26:60.19:0,60,820	0/0:35,0:35:93.05:0,93,1053	0/0:21,0:21:54.17:0,54,667	0/0:21,0:21:60.18:0,60,731	0/0:30,0:30:87.27:0,87,1078	0/0:21,0:21:60.18:0,60,731	0/0:31,0:31:90.28:0,90,1116	0/0:25,0:25:72.18:0,72,860	0/0:16,0:16:48.07:0,48,575	0/0:13,0:13:39.12:0,39,483	0/0:18,0:18:51.16:0,51,632	0/0:26,0:26:72.23:0,72,892	0/0:33,0:33:90.28:0,90,1115	1/1:0,22:22:63.21:907,63,0	0/0:13,0:13:36.09:0,36,432	0/0:20,0:20:60.17:0,60,730	0/0:31,0:31:93.21:0,93,1113	0/0:29,0:29:87.25:0,87,1063	0/0:24,0:24:66.19:0,66,805	0/0:26,0:26:72.17:0,72,871	0/0:26,0:26:75.24:0,75,930	0/0:23,0:23:66.21:0,66,814	0/0:28,0:28:81.24:0,81,983	0/0:29,0:28:78.24:0,78,963	0/0:24,0:24:63.20:0,63,781
chr10	1661195	.	A	AT	343.84	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-5.220;DP=599;FS=0.000;HRun=8;HaplotypeScore=54.8352;InbreedingCoeff=0.9128;MQ=55.78;MQ0=12;MQRankSum=1.462;QD=16.37;ReadPosRankSum=1.502;VQSLOD=3.4194;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,18:21:31.43:438,31,0	0/0:13,0:13:36.02:0,36,330	0/0:12,0:4:8.87:0,9,75	0/0:8,0:5:11.99:0,12,104	0/0:33,0:33:90.04:0,90,823	0/0:23,0:23:59.99:0,60,540	0/0:12,0:12:26.94:0,27,237	0/0:31,0:26:63.01:0,63,573	0/0:20,0:20:57.03:0,57,522	0/0:27,0:27:81.04:0,81,738	0/0:24,0:24:69.04:0,69,632	0/0:13,0:13:36.02:0,36,329	0/0:26,0:26:69.03:0,69,631	0/0:17,0:17:42.02:0,42,384	0/0:36,0:36:84.02:0,84,769	0/0:25,0:25:72:0,72,649	0/0:29,0:29:65.97:0,66,595	0/0:20,0:21:57.59:0,58,498	0/0:17,0:12:30.01:0,30,275	0/0:32,0:32:87.04:0,87,796	0/0:15,0:15:42.02:0,42,384	0/0:27,0:27:78.04:0,78,714	0/0:24,0:24:72.04:0,72,659	0/0:16,0:16:45.02:0,45,412	0/0:17,0:17:45:0,45,408	0/0:30,0:30:90.05:0,90,824	0/0:19,0:19:48:0,48,439	0/0:9,0:8:24.01:0,24,220
chr10	1661709	.	AT	A	1526.98	PASS	AB=0.833;AC=9;AF=0.161;AN=56;BaseQRankSum=9.405;DP=467;FS=1.509;HRun=11;HaplotypeScore=47.6470;InbreedingCoeff=0.8763;MQ=59.76;MQ0=1;MQRankSum=0.816;QD=15.42;ReadPosRankSum=0.473;VQSLOD=3.9947;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:20:62.04:0,62,601	0/0:4,0:4:12.03:0,12,128	0/0:12,0:10:21.05:0,21,217	0/1:4,1:4:0.02:0,0,0	0/0:21,1:22:23.47:0,23,451	0/0:18,0:18:45.11:0,45,480	0/0:13,1:14:12.63:0,13,321	0/0:15,0:15:33.08:0,33,352	0/0:17,0:17:45.11:0,45,479	0/0:19,0:19:32.10:0,32,319	0/0:18,0:19:47.95:0,48,494	0/0:15,1:16:20.47:0,20,423	0/0:11,0:11:24.06:0,24,256	0/0:8,0:8:21.05:0,21,223	0/0:10,0:10:30.08:0,30,320	0/0:23,0:23:63.15:0,63,665	1/1:3,0:15:3.33:33,3,0	0/0:13,0:13:33.08:0,33,348	0/0:15,0:14:30.06:0,30,307	0/0:34,0:34:85.10:0,85,896	0/0:10,1:11:8.24:0,8,265	0/0:17,0:17:51.12:0,51,538	0/0:21,0:21:60.10:0,60,626	0/0:11,0:12:29.91:0,30,302	0/0:16,0:16:33.08:0,33,346	1/1:0,22:22:62.88:511,63,0	1/1:4,37:41:99:837,102,0	1/1:4,12:16:35.95:295,36,0
chr10	1661942	.	C	CT	303.51	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-1.912;DP=612;FS=4.927;HRun=9;HaplotypeScore=65.7861;InbreedingCoeff=0.8795;MQ=56.40;MQ0=1;MQRankSum=-0.404;QD=17.85;ReadPosRankSum=-1.250;VQSLOD=3.5293;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:51.87:0,52,445	0/0:9,0:9:20.98:0,21,182	0/0:15,0:8:5.08:0,5,140	0/0:17,0:10:21.44:0,21,178	0/0:28,1:29:62.88:0,63,546	0/0:30,0:30:74.96:0,75,650	0/0:12,0:12:35.99:0,36,313	0/0:36,0:35:65.93:0,66,570	0/0:15,0:15:41.98:0,42,364	0/0:28,0:28:71.98:0,72,625	0/0:33,0:33:83.97:0,84,729	0/0:21,0:21:53.97:0,54,469	0/0:20,0:21:44.05:0,44,433	0/0:15,0:15:44.97:0,45,386	0/0:25,0:25:56.91:0,57,487	0/0:33,0:33:88.78:0,89,756	1/1:3,14:17:36.07:398,36,0	0/0:14,0:14:32.99:0,33,286	0/0:21,0:21:50.96:0,51,439	0/0:30,1:31:47.83:0,48,643	0/0:17,0:17:38.98:0,39,339	0/0:20,0:20:41.97:0,42,364	0/0:25,0:25:62.97:0,63,547	0/0:9,0:9:20.98:0,21,178	0/0:25,0:25:53.97:0,54,469	0/0:24,0:24:56.93:0,57,488	0/0:27,1:27:35.74:0,36,533	0/0:21,0:21:44.96:0,45,391
chr10	1662422	.	TA	T	4364.81	PASS	AB=0.673;AC=39;AF=0.813;AN=48;BaseQRankSum=-5.862;DP=347;FS=2.287;HRun=1;HaplotypeScore=387.5943;InbreedingCoeff=0.1608;MQ=25.46;MQ0=76;MQRankSum=0.825;QD=14.45;ReadPosRankSum=9.846;VQSLOD=2.9228;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:1:2.04:0,2,6	1/1:2,7:9:17.18:150,17,0	./.	./.	1/1:2,17:19:11.26:272,11,0	1/1:3,10:10:29.84:220,30,0	1/1:6,6:8:15.52:125,16,0	0/1:5,3:3:9.80:38,0,10	1/1:5,9:11:6.73:140,7,0	1/1:5,14:17:25.43:282,25,0	1/1:2,17:19:16.77:279,17,0	0/1:1,4:5:2.08:77,0,2	1/1:3,7:10:17.68:174,18,0	0/1:2,4:6:6.73:74,0,7	1/1:1,11:11:32.85:248,33,0	1/1:1,8:9:9.72:161,10,0	0/1:11,1:2:2.78:3,0,19	./.	0/0:7,0:1:0:0,0,0	1/1:5,27:32:33.29:538,33,0	./.	1/1:0,18:18:47.98:379,48,0	0/1:3,11:14:38.11:146,0,38	1/1:3,3:3:2.22:7,2,0	1/1:4,9:13:2.95:173,3,0	1/1:2,11:12:17.30:213,17,0	1/1:3,29:31:60.49:596,60,0	1/1:4,3:3:8.97:70,9,0
chr10	1662431	.	CT	C	3912.95	PASS	AB=0.738;AC=42;AF=0.875;AN=48;BaseQRankSum=-5.970;DP=379;FS=2.199;HRun=2;HaplotypeScore=462.6065;InbreedingCoeff=0.1377;MQ=25.55;MQ0=82;MQRankSum=-0.180;QD=11.58;ReadPosRankSum=7.672;VQSLOD=1.0074;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:1:2.04:0,2,6	1/1:3,7:10:19.10:143,19,0	./.	./.	1/1:3,17:20:4.71:250,5,0	1/1:7,10:14:31.75:194,32,0	1/1:8,6:9:4.77:90,5,0	0/1:8,3:3:7.35:33,0,7	1/1:6,9:13:8.46:138,8,0	1/1:6,14:18:26.76:264,27,0	1/1:4,17:21:17.84:233,18,0	1/1:1,4:5:4.16:73,4,0	1/1:5,7:12:13.71:153,14,0	0/1:3,4:6:3.80:63,0,4	1/1:1,11:11:32.54:220,33,0	1/1:3,8:11:16.64:156,17,0	0/1:11,1:3:2.42:2,0,13	./.	1/1:6,0:1:2.96:19,3,0	1/1:7,27:34:32.01:487,32,0	./.	1/1:2,18:20:46.60:343,47,0	0/1:6,11:17:33.78:127,0,34	1/1:4,3:3:2.22:7,2,0	1/1:4,9:13:8.09:175,8,0	1/1:4,11:14:15.27:162,15,0	1/1:5,29:33:50.30:518,50,0	1/1:2,3:3:8.90:61,9,0
chr10	1662445	.	CATTGAGTA	C	9548.52	PASS	AC=42;AF=1.000;AN=42;DP=199;FS=0.000;HRun=0;HaplotypeScore=270.8483;InbreedingCoeff=-0.0458;MQ=21.94;MQ0=83;QD=64.08;VQSLOD=4.2679;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,2:2:6.02:146,6,0	1/1:0,4:4:12.04:346,12,0	./.	./.	1/1:0,7:7:20.99:541,21,0	1/1:2,5:5:15.05:420,15,0	1/1:4,2:2:6.02:111,6,0	./.	1/1:3,11:11:33.11:977,33,0	1/1:2,6:6:18.06:500,18,0	1/1:0,8:8:24.08:643,24,0	1/1:0,3:3:9.03:272,9,0	1/1:0,7:7:18.06:543,18,0	1/1:1,2:2:6.02:181,6,0	1/1:1,1:1:3.01:74,3,0	1/1:1,4:4:12.04:359,12,0	1/1:8,2:2:6.02:146,6,0	./.	./.	1/1:0,12:12:36.12:1068,36,0	./.	1/1:0,5:5:15.05:432,15,0	1/1:0,10:10:30.10:839,30,0	1/1:4,2:2:3.01:91,3,0	1/1:0,5:5:15.05:453,15,0	1/1:1,8:8:21.07:603,21,0	1/1:3,9:9:27.09:805,27,0	./.
chr10	1666794	.	CG	C	13347.45	PASS	AC=52;AF=1.000;AN=52;BaseQRankSum=-1.211;DP=488;FS=3.951;HRun=1;HaplotypeScore=92.0837;InbreedingCoeff=-0.0063;MQ=34.07;MQ0=1;MQRankSum=-0.521;QD=28.10;ReadPosRankSum=1.488;VQSLOD=4.7455;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,22:22:45.62:629,46,0	1/1:0,8:6:12.04:168,12,0	./.	./.	1/1:2,20:20:36.11:486,36,0	1/1:2,18:20:34.36:500,34,0	1/1:3,17:20:30.10:415,30,0	1/1:0,27:23:69.19:942,69,0	1/1:1,28:28:69.23:963,69,0	1/1:5,22:26:66.22:914,66,0	1/1:1,14:14:21.07:292,21,0	1/1:1,15:15:30.09:404,30,0	1/1:0,19:14:30.10:414,30,0	1/1:1,16:16:39.13:540,39,0	1/1:1,23:20:42.12:567,42,0	1/1:2,28:28:75.23:1012,75,0	1/1:1,10:10:27.09:377,27,0	1/1:0,6:6:12.04:168,12,0	1/1:0,12:12:36.12:495,36,0	1/1:1,20:19:33.08:441,33,0	1/1:1,10:10:9.03:126,9,0	1/1:1,20:21:42.14:586,42,0	1/1:3,14:14:18.06:245,18,0	1/1:1,8:9:21.06:276,21,0	1/1:2,15:16:42.13:571,42,0	1/1:1,28:26:72.24:1004,72,0	1/1:2,18:19:48.13:644,48,0	1/1:0,5:4:12.04:168,12,0
chr10	1670980	.	CAT	C	243.64	PASS	AB=0.964;AC=6;AF=0.107;AN=56;BaseQRankSum=3.545;DP=348;FS=4.480;HRun=0;HaplotypeScore=43.6787;InbreedingCoeff=0.1910;MQ=79.10;MQ0=0;MQRankSum=-0.360;QD=4.51;ReadPosRankSum=0.296;VQSLOD=1.6469;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:45.12:0,45,693	0/1:5,1:6:28.17:28,0,88	0/0:12,0:10:3.46:0,3,25	0/0:14,1:10:4.30:0,4,16	0/0:13,0:13:27.09:0,27,442	0/0:17,0:17:30.10:0,30,490	0/0:11,0:11:15.05:0,15,246	0/0:29,1:30:66.15:0,66,1000	0/0:8,0:8:21.07:0,21,331	0/0:17,0:17:48.15:0,48,763	0/0:8,0:9:21.05:0,21,309	0/0:8,0:8:18.06:0,18,295	0/0:10,0:10:18.06:0,18,291	0/0:13,0:13:30.09:0,30,464	0/0:14,0:14:27.09:0,27,443	0/1:10,0:10:10.03:10,0,367	1/1:3,15:18:27:299,27,0	0/1:11,0:11:19.15:19,0,228	0/0:10,0:10:18.03:0,18,248	0/0:11,0:11:21.05:0,21,298	0/1:9,0:9:13.12:13,0,320	0/0:5,0:5:12.04:0,12,196	0/0:10,0:10:27.08:0,27,419	0/0:12,0:12:24.07:0,24,368	0/0:18,0:18:30.10:0,30,486	0/0:22,0:22:51.13:0,51,795	0/0:8,0:8:24.08:0,24,394	0/0:2,0:2:3.01:0,3,49
chr10	1671101	.	AT	A	352.79	PASS	AB=0.928;AC=5;AF=0.089;AN=56;BaseQRankSum=4.983;DP=441;FS=5.518;HRun=10;HaplotypeScore=46.2363;InbreedingCoeff=0.4088;MQ=68.28;MQ0=0;MQRankSum=0.011;QD=6.66;ReadPosRankSum=0.727;VQSLOD=0.6968;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:54.13:0,54,589	0/0:7,0:7:15.04:0,15,166	0/0:5,0:5:12.03:0,12,131	0/1:7,0:7:2.22:2,0,109	0/1:15,2:17:12.99:13,0,310	0/0:29,0:29:81.18:0,81,877	0/0:23,0:23:54.09:0,54,575	0/0:36,0:36:78.41:0,78,935	0/0:8,0:8:15.02:0,15,155	0/0:13,0:13:33.09:0,33,360	0/0:21,0:21:57.11:0,57,603	0/0:13,0:13:27.06:0,27,290	0/0:10,1:11:27.06:0,27,290	0/0:17,0:17:42.11:0,42,464	0/0:20,0:20:45.10:0,45,481	0/0:13,0:13:33.09:0,33,365	1/1:2,19:21:50.98:442,51,0	0/0:17,0:17:48.11:0,48,520	0/0:12,0:12:24.02:0,24,245	0/0:16,0:16:45.11:0,45,490	0/0:17,0:17:39.06:0,39,416	0/0:8,0:8:18.03:0,18,190	0/0:14,0:14:39.10:0,39,424	0/0:18,0:18:48.10:0,48,513	0/1:7,1:8:1.99:2,0,208	0/0:22,0:22:54.13:0,54,583	0/0:24,0:24:63.09:0,63,660	0/0:4,0:4:12.03:0,12,133
chr10	1671309	.	TAC	T	295.08	PASS	AB=0.931;AC=20;AF=0.400;AN=50;BaseQRankSum=4.839;DP=485;FS=0.918;HRun=0;HaplotypeScore=60.3518;InbreedingCoeff=-0.4482;MQ=62.60;MQ0=8;MQRankSum=1.451;QD=0.97;ReadPosRankSum=-0.320;VQSLOD=1.1741;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:27:17.95:0,18,167	0/1:10,0:10:17.02:17,0,99	./.	./.	0/1:14,4:19:75.30:75,0,272	0/0:20,0:20:18.06:0,18,262	0/1:5,0:6:23.32:23,0,62	0/0:25,0:24:11.84:0,12,92	0/1:11,1:11:23.40:23,0,60	0/1:14,2:16:43.77:44,0,188	0/1:13,0:13:3.14:3,0,140	0/1:5,0:5:23.38:23,0,77	0/1:13,2:15:14.35:14,0,183	0/1:16,2:18:23.38:23,0,79	0/0:21,0:21:10.76:0,11,211	0/1:18,3:21:8.49:8,0,245	1/1:14,0:18:8.52:42,9,0	0/1:16,1:17:4.91:5,0,260	./.	0/1:16,0:15:23.17:23,0,80	0/1:19,0:22:40.24:40,0,256	0/0:10,0:11:12.02:0,12,140	0/1:16,0:16:23.38:23,0,76	0/1:21,1:22:2.34:2,0,323	0/1:17,0:18:2.11:2,0,118	0/1:21,2:23:17.39:17,0,125	0/0:19,0:18:7.53:0,8,69	0/1:14,3:17:28.70:29,0,390
chr10	1676222	.	G	GA	424.30	PASS	AC=34;AF=1.000;AN=34;DP=42;FS=0.000;HRun=0;HaplotypeScore=13.5492;InbreedingCoeff=-0.0967;MQ=38.93;MQ0=1;QD=12.12;VQSLOD=3.5063;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,0:2:5.77:34,6,0	1/1:1,0:1:2.96:19,3,0	./.	./.	1/1:1,1:2:5.94:42,6,0	./.	./.	1/1:2,0:1:3:27,3,0	1/1:1,2:3:8.47:43,8,0	1/1:1,0:1:2.80:13,3,0	1/1:1,0:1:2.94:18,3,0	1/1:1,0:1:3:25,3,0	1/1:2,0:2:5.99:48,6,0	1/1:1,0:1:2.80:13,3,0	1/1:2,2:4:5.72:30,6,0	1/1:1,0:1:2.74:12,3,0	./.	./.	./.	1/1:2,0:2:5.96:45,6,0	1/1:5,0:5:8.64:46,9,0	1/1:3,0:3:5.91:38,6,0	./.	./.	./.	1/1:1,0:1:2.99:24,3,0	1/1:3,0:3:2.94:18,3,0	./.
chr10	1676950	.	GCACACA	G	257.10	PASS	AC=8;AF=0.148;AN=54;BaseQRankSum=1.868;DP=364;FS=18.390;HRun=0;HaplotypeScore=82.0494;InbreedingCoeff=0.6138;MQ=58.00;MQ0=8;MQRankSum=-0.979;QD=5.98;ReadPosRankSum=-0.316;VQSLOD=-0.1037;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:15.05:0,15,466	0/0:7,0:7:18.06:0,18,579	0/0:15,0:11:0:0,0,0	./.	0/0:15,0:15:23.80:0,24,693	0/0:17,0:18:24.08:0,24,551	0/0:14,0:14:12.04:0,12,301	0/0:19,0:19:2.29:0,2,6	1/1:6,0:6:3.01:53,3,0	0/0:7,0:5:9.03:0,9,271	0/0:12,0:12:15.05:0,15,476	0/0:6,0:7:9.03:0,9,284	0/0:8,0:8:15.05:0,15,443	0/0:10,0:10:15.05:0,15,395	0/0:11,0:13:30.10:0,30,777	0/0:12,0:13:24.08:0,24,652	0/0:9,0:9:0:0,0,0	0/0:13,0:14:15.05:0,15,435	0/0:12,0:12:9.03:0,9,239	0/0:16,0:18:21.05:0,21,550	0/0:29,0:28:41.99:0,42,1031	0/0:10,0:9:6.02:0,6,191	0/0:7,0:7:3.01:0,3,96	0/0:13,0:12:8.53:0,9,290	0/0:9,0:10:12.04:0,12,298	1/1:13,0:13:3.01:60,3,0	1/1:9,6:17:12.93:226,13,0	1/1:5,0:6:3.01:42,3,0
chr10	1677648	.	CA	C	789.76	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.023;DP=585;FS=13.256;HRun=5;HaplotypeScore=55.6253;InbreedingCoeff=0.9939;MQ=82.08;MQ0=0;MQRankSum=-1.916;QD=25.48;ReadPosRankSum=0.251;VQSLOD=2.0104;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,117,1550	0/0:12,0:12:33.10:0,33,436	0/0:19,0:19:36.97:0,37,615	0/0:28,0:28:29.88:0,30,663	0/0:25,0:25:75.24:0,75,1009	0/0:23,0:23:69.22:0,69,927	0/0:21,0:21:57.17:0,57,749	0/0:30,0:30:84.28:0,84,1148	0/0:30,0:30:78.26:0,78,1067	0/0:16,0:16:45.14:0,45,603	0/0:19,0:19:57.18:0,57,764	0/0:23,0:23:66.22:0,66,902	0/0:19,0:19:54.18:0,54,732	0/0:15,0:15:45.15:0,45,616	0/0:20,0:20:57.19:0,57,779	0/0:11,0:11:27.09:0,27,368	1/1:2,29:31:78.22:885,78,0	0/0:19,0:19:57.10:0,57,736	0/0:20,0:20:54.18:0,54,736	0/0:20,0:20:60.18:0,60,789	0/0:23,0:23:69.21:0,69,926	0/0:13,0:13:39.13:0,39,534	0/0:14,0:14:39.11:0,39,504	0/0:19,0:19:54.14:0,54,716	0/0:19,0:19:57.19:0,57,779	0/0:17,0:17:45.15:0,45,616	0/0:30,0:29:84.28:0,84,1147	0/0:7,0:7:21.07:0,21,287
chr10	1681321	.	G	GGTACTGAGCTGTA	3961.69	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-1.161;DP=519;FS=7.114;HRun=0;HaplotypeScore=180.5245;InbreedingCoeff=0.9881;MQ=80.74;MQ0=0;MQRankSum=-7.823;QD=107.07;ReadPosRankSum=0.702;VQSLOD=3.1387;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,9:22:36.12:2362,36,0	0/0:11,0:11:30.10:0,30,1112	0/0:20,0:20:56.97:0,57,1564	0/0:13,0:13:39.13:0,39,1204	0/0:22,0:22:66.23:0,66,2533	0/0:17,0:17:51.17:0,51,1961	0/0:14,0:14:42.14:0,42,1502	0/0:24,0:24:60.21:0,60,2232	0/0:16,0:16:48.16:0,48,1915	0/0:28,0:28:84.28:0,84,3105	0/0:23,0:23:66.23:0,66,2520	0/0:22,0:22:66.21:0,66,2489	0/0:8,0:8:24.08:0,24,857	0/0:17,0:17:48.15:0,48,1822	0/0:22,0:22:60.21:0,60,2247	0/0:7,0:7:21.07:0,21,839	1/1:10,2:15:30.10:1600,30,0	0/0:6,0:6:15.01:0,15,499	0/0:24,0:24:60.21:0,60,2099	0/0:23,0:23:63.22:0,63,2391	0/0:27,0:27:78.27:0,78,3073	0/0:18,0:18:42.14:0,42,1552	0/0:16,0:16:45.15:0,45,1732	0/0:17,0:17:48.16:0,48,1838	0/0:26,0:26:75.19:0,75,2669	0/0:23,0:23:66.23:0,66,2552	0/0:20,0:20:60.21:0,60,2254	0/0:18,0:18:48.16:0,48,1918
chr10	1684014	.	AT	A	1508.65	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.243;DP=675;FS=0.000;HRun=2;HaplotypeScore=58.6861;InbreedingCoeff=0.9988;MQ=54.76;MQ0=26;MQRankSum=4.096;QD=26.94;ReadPosRankSum=0.758;VQSLOD=3.2600;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,27:29:66.21:852,66,0	0/0:14,0:14:42.14:0,42,629	0/0:22,0:11:30.10:0,30,441	0/0:19,0:11:30.10:0,30,447	0/0:30,0:30:84.28:0,84,1259	0/0:31,0:31:78.25:0,78,1149	0/0:17,0:16:36.07:0,36,487	0/0:26,0:24:69.21:0,69,994	0/0:18,0:16:45.15:0,45,674	0/0:34,0:33:93.29:0,93,1339	0/0:27,0:27:78.26:0,78,1151	0/0:18,0:18:42.14:0,42,626	0/0:22,0:22:63.20:0,63,920	0/0:20,0:18:45.15:0,45,674	0/0:28,0:27:78.26:0,78,1163	0/0:20,0:20:51.17:0,51,764	1/1:0,23:22:60.20:779,60,0	0/0:16,0:12:27.06:0,27,372	0/0:27,0:25:72.24:0,72,1065	0/0:30,0:29:84.28:0,84,1255	0/0:29,0:27:75.25:0,75,1122	0/0:23,0:23:66.22:0,66,986	0/0:29,0:29:84.28:0,84,1249	0/0:24,0:22:57.12:0,57,827	0/0:24,0:23:66.22:0,66,989	0/0:30,0:29:75.23:0,75,1085	0/0:26,0:25:69.23:0,69,1031	0/0:15,0:14:42.14:0,42,622
chr10	1684876	.	TTGTCTAGTCCC	T	1315.04	PASS	AB=0.560;AC=2;AF=0.036;AN=56;BaseQRankSum=7.223;DP=623;FS=5.989;HRun=0;HaplotypeScore=188.3062;InbreedingCoeff=-0.0370;MQ=57.56;MQ0=2;MQRankSum=-7.380;QD=32.07;ReadPosRankSum=-0.581;VQSLOD=2.8257;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:6,17:23:87.92:669,0,88	0/0:17,0:17:45.15:0,45,2501	0/0:27,0:22:59.87:0,60,2539	0/0:25,0:22:57.17:0,57,2627	0/0:28,0:28:69.22:0,69,3610	0/0:27,0:27:78.27:0,78,3988	0/0:15,0:15:45.15:0,45,2129	0/0:22,0:22:60.20:0,60,3069	0/0:16,0:16:45.15:0,45,2574	0/0:27,0:27:75.24:0,75,3897	0/0:26,0:26:72.23:0,72,3706	0/0:18,0:18:42.14:0,42,2248	0/0:23,0:23:69.22:0,69,3787	0/0:19,0:19:54.19:0,54,3115	0/0:19,0:19:57.18:0,57,2823	0/0:23,0:23:63.22:0,63,3326	0/1:3,15:18:88.32:735,0,88	0/0:19,0:19:57.20:0,57,3143	0/0:26,0:23:66.19:0,66,2814	0/0:21,0:21:54.18:0,54,2678	0/0:26,0:26:66.23:0,66,3576	0/0:22,0:22:54.19:0,54,2929	0/0:20,0:20:54.19:0,54,2977	0/0:18,0:18:48.16:0,48,2623	0/0:21,0:21:60.21:0,60,3299	0/0:27,0:27:81.28:0,81,4315	0/0:27,0:27:75.24:0,75,3836	0/0:23,0:23:66.23:0,66,3787
chr10	1686186	.	T	TG	851.37	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-2.017;DP=631;FS=2.877;HRun=0;HaplotypeScore=55.6663;InbreedingCoeff=0.8328;MQ=54.58;MQ0=16;MQRankSum=-0.256;QD=30.41;ReadPosRankSum=1.156;VQSLOD=3.5052;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:25:59.19:0,59,811	0/0:7,0:7:21.03:0,21,258	0/0:19,0:4:9.02:0,9,110	0/0:14,0:2:6.02:0,6,84	0/0:37,0:37:99:0,108,1501	0/0:24,0:24:69.23:0,69,963	0/0:22,0:19:54.18:0,54,753	0/0:34,0:22:66.15:0,66,824	0/0:19,0:19:51.14:0,51,678	0/0:29,0:29:87.28:0,87,1203	0/0:23,0:22:63.15:0,63,839	0/0:13,0:13:36.12:0,36,503	0/0:24,0:24:72.23:0,72,989	0/0:17,0:17:51.14:0,51,678	0/0:24,0:23:63.21:0,63,879	0/0:15,0:15:45.15:0,45,628	1/1:2,26:28:13.28:938,13,0	0/0:25,0:25:63.03:0,63,806	0/0:24,0:18:48.13:0,48,668	0/0:22,0:22:63.21:0,63,874	0/0:12,0:12:33.08:0,33,441	0/0:24,0:24:72.24:0,72,1006	0/0:31,0:29:81.24:0,81,1097	0/0:19,0:19:45.15:0,45,628	0/0:23,0:22:63.20:0,63,865	0/0:29,0:28:81.26:0,81,1118	0/0:31,0:31:92.67:0,93,1265	0/0:15,0:15:45.15:0,45,629
chr10	1688358	.	TCTC	T	345.19	PASS	AB=0.926;AC=5;AF=0.096;AN=52;BaseQRankSum=5.504;DP=281;FS=3.236;HRun=0;HaplotypeScore=39.8091;InbreedingCoeff=-0.1379;MQ=38.74;MQ0=53;MQRankSum=-1.535;QD=5.66;ReadPosRankSum=0.434;VQSLOD=1.3260;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:9,0:9:18.86:39,0,19	./.	0/0:6,0:5:14.97:0,15,193	0/0:2,0:1:3.01:0,3,44	0/0:6,0:4:6.02:0,6,88	0/0:9,0:8:15.05:0,15,243	0/0:25,0:18:25.84:0,26,301	0/1:22,0:6:7.37:7,0,30	0/0:14,0:13:33.38:0,33,462	0/0:7,0:2:6.02:0,6,110	0/1:6,0:6:7.91:8,0,76	0/0:10,0:10:21.07:0,21,370	0/0:14,0:9:12.04:0,12,190	0/0:5,0:3:6.02:0,6,111	0/0:11,0:10:21.07:0,21,377	0/0:5,0:5:12.04:0,12,177	0/1:7,10:14:83.75:388,0,84	0/1:7,0:5:6.78:7,0,162	0/0:9,0:3:9.03:0,9,129	0/0:3,0:2:3.01:0,3,67	0/0:19,0:15:42.10:0,42,617	./.	0/0:5,0:4:9.03:0,9,150	0/0:21,0:20:56.93:0,57,864	0/0:8,0:6:15.05:0,15,268	0/0:18,0:15:25.22:0,25,615	0/0:12,0:9:15.01:0,15,197	0/0:6,0:3:6.02:0,6,88
chr10	1688364	.	TCTC	T	526.72	PASS	AB=1.000;AC=5;AF=0.096;AN=52;BaseQRankSum=5.417;DP=292;FS=3.563;HRun=0;HaplotypeScore=38.5622;InbreedingCoeff=0.1610;MQ=39.63;MQ0=48;MQRankSum=-3.915;QD=9.58;ReadPosRankSum=-1.520;VQSLOD=2.1059;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:9,0:9:15.94:53,0,16	./.	0/0:13,0:6:15.50:0,15,177	0/0:2,0:1:3.01:0,3,38	0/0:6,0:4:6.02:0,6,76	0/0:9,0:8:14.96:0,15,193	0/0:25,0:18:14.77:0,15,143	1/1:13,9:10:16.53:191,17,0	0/0:13,0:12:30.13:0,30,362	0/0:8,0:3:0.41:0,0,24	0/1:7,0:7:11.60:12,0,99	0/0:10,0:10:18.06:0,18,309	0/0:15,0:10:14.99:0,15,171	0/0:5,0:3:6.02:0,6,101	0/0:11,0:10:21.07:0,21,343	0/0:5,0:5:12.04:0,12,152	0/1:17,0:14:16.41:387,0,16	0/0:7,0:5:12.04:0,12,198	0/0:8,0:4:6.71:0,7,110	0/0:3,0:2:3.01:0,3,63	0/0:21,0:17:45.98:0,46,613	./.	0/0:4,0:4:9.03:0,9,134	0/0:22,0:21:57.49:0,57,757	0/0:9,0:7:17.92:0,18,217	0/0:19,0:16:29:0,29,463	0/0:12,0:9:10.79:0,11,103	0/0:6,0:3:6.02:0,6,76
chr10	1688827	.	C	CCTTT	1332.05	PASS	AB=0.723;AC=7;AF=0.140;AN=50;BaseQRankSum=0.716;DP=512;FS=1.635;HRun=0;HaplotypeScore=83.9104;InbreedingCoeff=0.7431;MQ=57.84;MQ0=5;MQRankSum=-1.006;QD=13.06;ReadPosRankSum=-0.341;VQSLOD=3.1737;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:20:18.04:215,18,0	0/0:6,0:6:9.02:0,9,118	./.	./.	0/0:20,0:20:33.11:0,33,504	0/0:27,0:27:45.13:0,45,648	0/0:16,0:16:21.04:0,21,277	./.	0/0:20,0:20:39.12:0,39,580	0/0:19,0:19:21.07:0,21,307	0/0:14,0:15:21.05:0,21,283	0/0:18,0:19:24.07:0,24,348	0/0:22,0:22:27.05:0,27,354	0/0:18,0:18:30.10:0,30,462	0/0:8,0:8:18.06:0,18,278	0/0:7,0:7:3.01:0,3,46	0/0:20,0:19:19.06:0,19,156	0/0:11,0:17:9.01:0,9,84	0/0:22,0:17:24.08:0,24,369	0/0:20,0:20:37.78:0,38,550	0/0:16,0:16:23.40:0,23,348	0/0:11,0:11:21.04:0,21,281	0/0:9,0:9:21.07:0,21,319	0/0:27,0:27:45.15:0,45,681	0/0:15,0:15:18.06:0,18,278	0/1:21,0:34:15.17:344,0,15	1/1:10,18:28:21.06:493,21,0	1/1:5,13:18:18.06:422,18,0
chr10	1694174	.	CACAT	C	533.65	PASS	AB=0.964;AC=11;AF=0.196;AN=56;BaseQRankSum=4.960;DP=603;FS=20.729;HRun=0;HaplotypeScore=108.9713;InbreedingCoeff=0.1983;MQ=53.69;MQ0=9;MQRankSum=0.772;QD=3.08;ReadPosRankSum=-2.944;VQSLOD=-0.1490;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:18:30.81:240,31,0	0/1:10,0:10:23.16:23,0,318	0/0:16,0:8:23.97:0,24,236	0/0:31,0:20:23.54:0,24,165	0/1:27,0:26:0.10:0,0,415	0/0:20,0:20:29.72:0,30,580	0/0:29,0:29:68.91:0,69,985	0/0:28,0:27:9.89:0,10,470	0/1:13,0:12:23.39:23,0,152	0/0:26,0:26:47.33:0,47,954	0/0:18,0:18:38.21:0,38,466	0/0:19,0:19:31.68:0,32,594	0/0:15,0:15:38.96:0,39,569	0/0:11,0:11:11.56:0,12,232	0/0:18,0:18:19.99:0,20,480	0/0:24,0:23:4.68:0,5,802	1/1:18,0:18:29.73:233,30,0	0/1:17,0:17:60.28:60,0,520	0/0:14,0:12:5.85:0,6,240	0/1:20,0:20:3.46:3,0,437	0/0:40,0:39:78.93:0,79,1175	0/1:17,6:23:45.51:46,0,190	0/0:21,0:21:43.81:0,44,707	0/0:32,0:32:51.18:0,51,965	0/0:29,0:29:76.71:0,77,879	0/0:21,0:20:30.32:0,30,351	0/1:22,1:22:54.85:55,0,235	0/0:18,0:18:2.95:0,3,218
chr10	1694176	.	CAT	C	738.28	PASS	AB=0.987;AC=14;AF=0.250;AN=56;BaseQRankSum=7.281;DP=598;FS=43.217;HRun=0;HaplotypeScore=86.7725;InbreedingCoeff=0.0150;MQ=53.64;MQ0=10;MQRankSum=2.197;QD=3.40;ReadPosRankSum=-1.401;VQSLOD=-0.2697;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:21,1:18:32.93:284,33,0	0/1:10,0:10:23.09:23,0,208	0/0:16,0:8:23.97:0,24,236	0/0:27,0:16:23.54:0,24,165	0/1:27,0:26:40.39:40,0,251	0/0:19,0:20:27.32:0,27,367	0/0:28,1:29:71.86:0,72,807	0/0:25,4:28:8.33:0,8,463	0/1:14,0:13:25.05:25,0,91	0/0:26,0:26:21.72:0,22,676	0/0:14,3:17:38.06:0,38,356	0/1:19,0:19:6.49:6,0,347	0/1:14,0:14:6.66:7,0,299	0/0:11,0:11:11.54:0,12,158	0/0:18,0:18:11.41:0,11,371	0/0:25,0:24:4.45:0,4,575	1/1:19,0:19:33.03:229,33,0	0/1:17,1:18:83.83:84,0,363	0/1:14,0:12:14.14:14,0,166	0/1:20,0:20:11.94:12,0,343	0/0:41,0:40:23.85:0,24,815	0/0:22,1:22:8.80:0,9,208	0/0:19,0:19:43.59:0,44,545	0/0:30,0:30:5.05:0,5,571	0/0:29,0:29:76.14:0,76,662	0/0:21,0:20:5.38:0,5,320	0/1:21,2:22:99:147,0,131	0/1:17,0:17:27.78:28,0,102
chr10	1694178	.	TAC	T	557.96	PASS	AB=0.951;AC=20;AF=0.385;AN=52;BaseQRankSum=4.542;DP=601;FS=7.034;HRun=0;HaplotypeScore=89.8725;InbreedingCoeff=0.0109;MQ=53.20;MQ0=10;MQRankSum=1.517;QD=1.78;ReadPosRankSum=0.707;VQSLOD=1.0834;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:19:2.45:20,2,0	0/0:10,0:10:11.86:0,12,178	./.	./.	0/1:25,2:26:99:118,0,124	0/1:20,0:20:8.78:9,0,232	0/0:29,0:29:26.95:0,27,371	0/0:27,0:26:4.87:0,5,102	1/1:7,6:13:8.85:80,9,0	0/1:24,0:24:0.73:1,0,291	0/0:17,0:17:12.04:0,12,164	0/0:19,0:19:12.92:0,13,245	0/1:13,1:14:12.39:12,0,184	0/1:11,0:11:21.79:22,0,83	0/1:18,0:18:12.41:12,0,221	0/1:25,0:24:2.75:3,0,369	0/1:20,0:21:8.81:17,0,9	0/1:17,1:18:39.65:40,0,235	0/1:13,1:12:17.82:33,0,18	0/0:20,0:20:15.49:0,15,195	0/0:40,0:39:38.58:0,39,473	1/1:22,0:22:5.59:26,6,0	0/0:21,1:22:29.91:0,30,365	0/0:30,0:30:27.17:0,27,356	0/0:30,0:30:38.71:0,39,508	0/1:21,0:20:11.86:24,0,12	1/1:16,8:23:22.46:216,22,0	0/1:8,8:16:26.89:87,0,27
chr10	1698179	.	GCACA	G	295.70	PASS	AB=0.900;AC=12;AF=0.240;AN=50;BaseQRankSum=3.898;DP=385;FS=2.317;HRun=0;HaplotypeScore=66.4482;InbreedingCoeff=0.4131;MQ=60.90;MQ0=16;MQRankSum=-0.931;QD=3.18;ReadPosRankSum=1.615;VQSLOD=1.1645;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:9:0,9,161	0/0:6,0:6:9.03:0,9,180	./.	./.	0/0:14,0:14:11.93:0,12,201	0/0:14,0:14:15.04:0,15,305	0/0:11,0:11:6.02:0,6,139	./.	1/1:5,3:8:5.81:59,6,0	0/0:5,0:5:6.02:0,6,111	0/0:8,0:8:15.04:0,15,267	0/0:10,0:10:9.03:0,9,208	0/0:7,0:7:11.78:0,12,196	0/0:7,0:7:9.03:0,9,210	0/0:7,0:7:9.01:0,9,164	0/0:8,0:9:2.74:0,3,12	1/1:16,1:19:0.27:99,0,0	0/0:13,0:12:6:0,6,94	0/0:8,0:8:3:0,3,26	0/0:6,0:8:17.08:0,17,116	0/0:19,0:18:3.01:0,3,70	0/1:15,0:16:9.27:9,0,290	0/0:16,0:16:23.92:0,24,378	0/1:17,2:18:27.88:28,0,307	0/0:13,0:15:26.55:0,27,417	1/1:14,4:18:2.28:45,2,0	1/1:1,1:3:6.01:74,6,0	1/1:6,3:9:9.02:120,9,0
chr10	1700328	.	TTTTATTTATTTA	T	417.87	PASS	AC=4;AF=0.077;AN=52;BaseQRankSum=3.844;DP=247;FS=11.087;HRun=0;HaplotypeScore=78.8700;InbreedingCoeff=0.4986;MQ=60.44;MQ0=1;MQRankSum=-3.007;QD=12.66;ReadPosRankSum=-0.532;VQSLOD=0.1696;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:9,0:12:20.98:317,21,0	0/0:5,0:5:3.01:0,3,176	0/0:3,0:2:2.97:0,3,20	./.	0/0:13,0:13:21.07:0,21,1178	0/0:7,0:7:18.05:0,18,846	0/0:3,0:3:3.01:0,3,176	0/0:32,0:32:42.57:0,43,1061	0/0:3,0:3:9.02:0,9,377	0/0:6,0:6:9.03:0,9,529	0/0:14,0:14:18.06:0,18,909	0/0:4,0:4:6.02:0,6,353	0/0:6,0:6:12.03:0,12,526	0/0:4,0:4:9.03:0,9,424	0/0:4,0:4:9.03:0,9,529	0/0:4,0:4:9.03:0,9,529	1/1:10,11:21:6.02:208,6,0	0/0:9,0:9:15.05:0,15,759	0/0:15,0:15:21.07:0,21,938	0/0:10,0:10:12.03:0,12,554	0/0:2,0:2:6.02:0,6,227	0/0:5,0:5:9.03:0,9,517	0/0:8,0:8:3.01:0,3,176	0/0:8,0:8:18.04:0,18,794	0/0:15,0:15:33.10:0,33,1743	./.	0/0:12,0:12:27.09:0,27,1316	0/0:16,0:16:48.16:0,48,2670
chr10	1701279	.	TATGA	T	2440.73	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.957;DP=629;FS=0.564;HRun=0;HaplotypeScore=102.7198;InbreedingCoeff=0.9991;MQ=96.25;MQ0=0;MQRankSum=-5.302;QD=42.82;ReadPosRankSum=1.504;VQSLOD=3.7080;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,29:29:69.24:1310,69,0	0/0:14,0:14:42.14:0,42,1134	0/0:32,0:32:95.52:0,96,2221	0/0:32,0:32:74.93:0,75,1939	0/0:27,0:27:72.25:0,72,1920	0/0:23,0:23:63.22:0,63,1639	0/0:14,0:14:42.14:0,42,1101	0/0:27,0:27:78.26:0,78,2011	0/0:19,0:19:54.19:0,54,1458	0/0:22,0:22:66.22:0,66,1649	0/0:12,0:12:33.11:0,33,870	0/0:22,0:22:66.23:0,66,1752	0/0:18,0:18:54.19:0,54,1458	0/0:11,0:11:33.11:0,33,891	0/0:25,0:25:75.26:0,75,1995	0/0:26,0:26:72.23:0,72,1867	1/1:3,25:28:66.23:1253,66,0	0/0:13,0:13:36.12:0,36,972	0/0:23,0:23:60.18:0,60,1522	0/0:23,0:23:66.23:0,66,1761	0/0:25,0:25:75.24:0,75,1893	0/0:33,0:33:99:0,99,2575	0/0:19,0:19:57.20:0,57,1518	0/0:33,0:33:99:0,99,2632	0/0:14,0:14:42.14:0,42,1035	0/0:22,0:22:66.23:0,66,1690	0/0:34,0:34:99:0,99,2530	0/0:9,0:9:27.09:0,27,729
chr10	1701757	.	CT	C	805.69	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.723;DP=404;FS=0.679;HRun=8;HaplotypeScore=43.3477;InbreedingCoeff=0.8426;MQ=70.26;MQ0=2;MQRankSum=1.697;QD=17.52;ReadPosRankSum=1.537;VQSLOD=3.2017;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,27:30:60.09:579,60,0	0/0:5,0:5:15.05:0,15,181	0/0:20,0:10:16.01:0,16,119	0/0:5,0:5:4.60:0,5,58	0/0:24,0:24:69.10:0,69,771	0/0:15,0:15:42.12:0,42,495	0/0:9,0:9:24.06:0,24,277	0/0:28,0:28:72.19:0,72,860	0/0:8,0:8:24.07:0,24,290	0/0:21,0:21:63.17:0,63,733	0/0:31,0:31:90.17:0,90,1026	0/0:9,0:9:24.07:0,24,290	0/0:11,0:11:23.85:0,24,254	0/0:4,0:4:6.02:0,6,72	0/0:9,0:9:27.08:0,27,326	0/0:10,0:10:30.05:0,30,337	1/1:0,16:16:36.06:348,36,0	0/0:16,0:16:48.15:0,48,579	0/0:15,0:15:39.11:0,39,461	0/0:25,0:25:72.17:0,72,839	0/0:6,0:6:12.04:0,12,145	0/0:6,0:6:18.06:0,18,217	0/0:12,0:12:30.08:0,30,351	0/0:5,0:5:11.99:0,12,128	0/0:10,0:10:21.05:0,21,239	0/0:21,0:21:57.16:0,57,670	0/0:22,0:22:63.16:0,63,725	0/0:11,0:11:33.10:0,33,398
chr10	1708349	.	GTACC	G	2086.44	PASS	AB=0.948;AC=20;AF=0.385;AN=52;BaseQRankSum=3.858;DP=536;FS=1.668;HRun=0;HaplotypeScore=97.9051;InbreedingCoeff=-0.6048;MQ=43.37;MQ0=58;MQRankSum=1.353;QD=4.87;ReadPosRankSum=0.508;VQSLOD=1.9581;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,9:24:7.71:0,8,38	0/1:9,0:7:57.76:58,0,68	./.	./.	0/1:10,0:8:18.06:18,0,141	0/1:15,7:20:34.56:59,0,35	0/1:33,2:26:43.44:43,0,455	0/0:17,0:11:1.82:0,2,383	0/1:21,3:20:58.74:59,0,290	0/1:15,4:12:99:129,0,190	0/0:15,0:14:10.17:0,10,283	0/1:23,0:18:46.62:47,0,134	0/1:12,0:9:30.31:30,0,121	0/1:30,0:26:12.14:12,0,268	0/1:21,1:19:0.87:1,0,339	0/0:18,0:15:8.82:0,9,137	0/1:24,1:25:99:312,0,222	0/1:20,0:16:61.29:61,0,349	0/1:12,0:4:7.38:7,0,61	0/1:17,1:16:24.88:25,0,279	0/1:44,1:38:67.56:400,0,68	0/0:11,5:14:10.84:0,11,240	0/0:14,0:12:17.74:0,18,298	0/1:37,0:26:99:221,0,343	0/1:16,0:14:23.40:117,0,23	0/1:15,6:15:99:172,0,167	0/1:12,1:13:36:184,0,36	0/1:15,0:11:4.73:276,0,5
chr10	1708350	.	TAC	T	1347.60	PASS	AB=0.984;AC=21;AF=0.404;AN=52;BaseQRankSum=5.193;DP=528;FS=11.819;HRun=0;HaplotypeScore=90.2507;InbreedingCoeff=-0.5090;MQ=43.25;MQ0=58;MQRankSum=2.160;QD=3.23;ReadPosRankSum=0.933;VQSLOD=0.8663;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:24:4.78:0,5,39	0/1:9,0:7:27.60:28,0,62	./.	./.	0/1:10,0:8:16:16,0,114	1/1:21,2:21:9.29:80,9,0	0/1:32,2:25:53.44:53,0,374	0/1:16,1:11:6.20:6,0,326	0/1:24,0:20:15.04:15,0,265	0/1:19,0:12:72.40:72,0,132	0/0:14,0:13:15.68:0,16,259	0/1:22,1:18:45.28:45,0,84	0/1:12,0:9:40.94:41,0,108	0/1:30,0:26:3.09:3,0,250	0/0:22,0:19:15.80:0,16,326	0/0:12,6:15:8.84:0,9,137	0/1:23,1:24:99:165,0,275	0/1:20,0:16:80.85:81,0,309	0/1:13,0:5:3.49:3,0,43	0/1:18,0:16:17.73:18,0,219	0/1:43,1:37:52.95:295,0,53	0/0:15,0:13:12.29:0,12,176	0/0:14,0:12:8.45:0,8,254	0/1:35,1:25:99:199,0,188	0/1:15,1:14:18.27:53,0,18	0/1:20,0:14:76.42:76,0,137	0/1:13,0:13:46.01:88,0,46	0/1:12,0:8:20.32:158,0,20
chr10	1708353	.	CTG	C	69.71	PASS	AB=0.971;AC=17;AF=0.327;AN=52;BaseQRankSum=3.827;DP=542;FS=1.360;HRun=0;HaplotypeScore=101.2456;InbreedingCoeff=0.1404;MQ=42.83;MQ0=61;MQRankSum=0.426;QD=0.25;ReadPosRankSum=-0.875;VQSLOD=2.0181;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:35,0:31:0:0,0,0	0/0:8,0:7:0.42:0,0,9	./.	./.	0/0:12,0:8:6.01:0,6,70	0/0:23,0:21:8.77:0,9,133	0/1:32,1:25:20.47:20,0,77	0/0:18,0:12:4.25:0,4,38	1/1:23,0:20:5.60:28,6,0	0/1:20,0:12:0.72:1,0,59	0/0:10,0:13:6:0,6,54	0/0:17,6:18:6.02:0,6,89	0/0:14,0:11:8.51:0,9,94	1/1:28,0:25:2.88:32,3,0	0/0:19,1:18:15.03:0,15,188	1/1:17,1:15:2.86:20,3,0	1/1:25,0:25:0.24:9,0,0	0/0:23,0:19:17.99:0,18,194	0/0:13,0:5:3.01:0,3,44	0/1:17,0:15:22.67:23,0,68	0/0:43,0:37:0.17:0,0,125	0/0:15,0:13:6.02:0,6,89	0/0:14,0:12:2.58:0,3,43	0/1:36,0:27:25.06:25,0,200	0/1:15,0:14:5.22:5,0,80	0/0:20,0:14:3.38:0,3,17	0/1:13,0:14:0.11:8,0,0	1/1:11,0:8:1.28:29,1,0
chr10	1708524	.	T	TCAA	793.97	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-2.958;DP=581;FS=1.996;HRun=0;HaplotypeScore=87.0989;InbreedingCoeff=0.7658;MQ=68.18;MQ0=2;MQRankSum=-1.678;QD=28.36;ReadPosRankSum=0.546;VQSLOD=3.3186;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,21:26:8.37:876,8,0	0/0:15,0:15:27.09:0,27,385	0/0:31,0:22:31.01:0,31,406	0/0:30,0:25:2.74:0,3,444	0/0:11,0:11:21.07:0,21,299	0/0:23,0:23:48.16:0,48,684	0/0:22,0:22:48.16:0,48,677	0/0:22,0:22:36.12:0,36,501	0/0:22,0:22:54.18:0,54,767	0/0:25,0:25:57.18:0,57,797	0/0:15,0:15:36.12:0,36,501	0/0:16,0:16:36.12:0,36,507	0/0:16,0:16:39.13:0,39,548	0/0:17,0:17:36.10:0,36,494	0/0:36,0:37:72.19:0,72,985	0/0:16,0:16:33.11:0,33,459	0/0:25,0:25:26.70:0,27,180	0/0:23,0:22:45.15:0,45,641	0/0:15,0:15:33.11:0,33,470	0/0:17,0:17:39.13:0,39,556	0/0:17,0:17:33.11:0,33,470	0/0:20,0:20:51.17:0,51,727	0/0:25,0:25:69.23:0,69,963	0/0:26,0:26:30.10:0,30,428	0/0:19,0:19:48.16:0,48,677	0/0:21,0:21:54.17:0,54,753	0/0:21,0:21:45.15:0,45,641	0/0:6,0:6:18.05:0,18,227
chr10	1708541	.	AACAC	A	418.28	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.119;DP=622;FS=1.169;HRun=0;HaplotypeScore=102.2336;InbreedingCoeff=0.9955;MQ=68.68;MQ0=5;MQRankSum=0.132;QD=19.01;ReadPosRankSum=1.642;VQSLOD=3.4194;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:27:71.46:0,71,1313	0/0:11,0:11:30.09:0,30,720	0/0:45,0:27:71.91:0,72,944	0/0:34,0:25:51.88:0,52,1062	0/0:15,0:15:36.09:0,36,748	0/0:20,0:20:57.20:0,57,1435	0/0:22,0:22:59.19:0,59,1378	0/0:22,0:22:60.16:0,60,1195	0/0:24,0:24:66.16:0,66,1618	0/0:30,0:30:81.28:0,81,1953	0/0:15,0:15:42.10:0,42,930	0/0:16,0:16:48.15:0,48,1117	0/0:16,0:16:45.14:0,45,1010	0/0:17,0:17:48.15:0,48,1108	0/0:29,0:29:73.98:0,74,1777	0/0:18,0:18:48.13:0,48,1032	1/1:4,18:22:27.09:512,27,0	0/0:22,0:21:60.19:0,60,1377	0/0:22,0:22:60.18:0,60,1226	0/0:30,0:30:90.29:0,90,1925	0/0:12,0:12:36.11:0,36,822	0/0:25,0:25:72.25:0,72,1713	0/0:29,0:29:87.22:0,87,1884	0/0:21,0:21:25.19:0,25,961	0/0:20,0:20:60.10:0,60,1267	0/0:27,0:27:78.26:0,78,1722	0/0:20,0:20:57.06:0,57,1269	0/0:9,0:9:26.78:0,27,419
chr10	1709606	.	T	TAC	2946.67	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-9.532;DP=932;FS=6.088;HRun=0;HaplotypeScore=112.3729;InbreedingCoeff=0.9998;MQ=71.40;MQ0=1;MQRankSum=-1.110;QD=33.48;ReadPosRankSum=2.802;VQSLOD=6.1739;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,49:59:99:2030,123,0	0/0:17,0:17:45.14:0,45,556	0/0:35,0:31:37.50:0,38,689	0/0:41,0:40:46.04:0,46,669	0/0:32,0:32:72.23:0,72,899	0/0:28,1:29:40.98:0,41,861	0/0:46,0:46:99:0,117,1450	0/0:41,0:41:99:0,102,1230	0/0:32,0:32:81.25:0,81,1001	0/0:42,0:42:99:0,114,1425	0/0:14,0:14:39.11:0,39,476	0/0:32,0:32:78.22:0,78,949	0/0:31,0:31:75.19:0,75,889	0/0:37,0:37:96.29:0,96,1188	0/0:37,0:37:96.28:0,96,1169	0/0:34,0:34:99:0,99,1237	1/1:5,24:28:63.22:1039,63,0	0/0:22,0:22:43.01:0,43,514	0/0:23,0:23:57.16:0,57,689	0/0:44,0:45:99:0,123,1501	0/0:55,0:55:99:0,142,1753	0/0:34,0:34:99:0,99,1237	0/0:29,0:29:75.21:0,75,912	0/0:36,0:36:81.22:0,81,996	0/0:30,0:30:81.20:0,81,960	0/0:26,0:26:65.86:0,66,777	0/0:32,0:32:90.26:0,90,1099	0/0:12,0:12:36.08:0,36,418
chr10	1710219	.	A	AC	2922.02	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-11.531;DP=755;FS=1.020;HRun=2;HaplotypeScore=73.0224;InbreedingCoeff=0.9998;MQ=86.41;MQ0=0;MQRankSum=-1.184;QD=37.46;ReadPosRankSum=0.665;VQSLOD=4.2099;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,43:46:99:1791,126,0	0/0:18,0:18:51.14:0,51,619	0/0:26,0:26:66.19:0,66,800	0/0:23,0:23:63.17:0,63,766	0/0:36,0:36:99:0,102,1251	0/0:15,0:15:42.13:0,42,521	0/0:22,0:22:57.14:0,57,678	0/0:32,0:32:93.29:0,93,1152	0/0:26,0:26:78.25:0,78,967	0/0:37,0:37:99:0,108,1312	0/0:31,0:31:87.27:0,87,1078	0/0:21,0:21:63.20:0,63,781	0/0:18,0:18:51.16:0,51,632	0/0:23,0:23:63.20:0,63,780	0/0:31,0:31:93.29:0,93,1153	0/0:27,0:27:81.25:0,81,1004	1/1:1,31:32:87.29:1253,87,0	0/0:11,0:11:33.10:0,33,409	0/0:21,0:21:54.17:0,54,669	0/0:46,0:46:99:0,129,1599	0/0:29,0:29:81.22:0,81,976	0/0:25,0:25:69.19:0,69,829	0/0:29,0:29:84.26:0,84,1041	0/0:19,0:18:57.18:0,57,707	0/0:28,0:28:78.24:0,78,967	0/0:33,0:33:96.30:0,96,1190	0/0:33,0:33:93.28:0,93,1139	0/0:17,0:17:51.16:0,51,630
chr10	1711000	.	CT	C	1399.39	PASS	AB=0.950;AC=6;AF=0.107;AN=56;BaseQRankSum=8.945;DP=476;FS=4.558;HRun=9;HaplotypeScore=48.1389;InbreedingCoeff=0.7013;MQ=70.96;MQ0=3;MQRankSum=1.297;QD=14.14;ReadPosRankSum=2.975;VQSLOD=3.4108;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,39:42:99:1016,111,0	0/0:3,0:3:6.02:0,6,69	0/0:18,0:9:21.01:0,21,226	0/1:23,0:16:0.81:1,0,192	0/0:13,0:12:36.11:0,36,415	0/0:7,0:7:18.04:0,18,198	0/0:19,0:19:42.09:0,42,463	0/0:34,0:34:81.20:0,81,920	0/0:18,0:18:42.12:0,42,485	0/0:13,0:13:30.09:0,30,346	0/0:9,0:9:21.06:0,21,239	0/0:17,0:17:39.06:0,39,410	0/0:14,0:14:33.10:0,33,381	0/0:13,0:13:35.78:0,36,390	0/0:16,0:16:45.13:0,45,519	0/0:15,0:15:42.12:0,42,485	1/1:3,22:25:41.25:503,41,0	0/0:19,0:20:47.90:0,48,494	0/0:26,0:26:60.18:0,60,692	0/0:7,0:7:21.06:0,21,242	0/0:21,0:21:48.14:0,48,554	0/0:15,0:15:36.09:0,36,406	0/1:8,1:9:3.40:3,0,218	0/0:21,0:21:54.16:0,54,623	0/0:14,0:14:36.11:0,36,415	0/0:20,0:20:54.15:0,54,615	0/0:14,0:14:39.11:0,39,449	0/0:10,0:10:30.09:0,30,346
chr10	1711699	.	C	CT	208.32	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.293;DP=432;FS=0.000;HRun=6;HaplotypeScore=85.9009;InbreedingCoeff=0.9649;MQ=81.53;MQ0=0;MQRankSum=-2.457;QD=20.83;ReadPosRankSum=0.322;VQSLOD=2.7291;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:48.10:0,48,489	0/0:7,0:7:18.04:0,18,183	0/0:18,0:18:41.87:0,42,375	0/0:20,0:20:47.80:0,48,471	0/0:14,0:14:24.05:0,24,244	0/0:13,0:13:29.45:0,29,305	0/0:11,0:11:27.06:0,27,275	0/0:35,0:35:90.09:0,90,887	0/0:13,0:13:30.06:0,30,306	0/0:17,0:17:51.12:0,51,520	0/0:17,0:17:36.07:0,36,367	0/0:14,0:14:36.08:0,36,365	0/0:9,0:9:24.05:0,24,244	0/0:12,0:12:30.06:0,30,301	0/0:18,0:18:39.08:0,39,397	0/0:10,0:10:27.06:0,27,275	1/1:1,9:10:24.08:302,24,0	0/0:13,0:13:39.09:0,39,398	0/0:15,0:15:42.09:0,42,428	0/0:18,0:18:39.08:0,39,397	0/0:14,0:14:27.05:0,27,275	0/0:13,0:13:30.07:0,30,306	0/0:27,0:27:60.02:0,60,664	0/0:17,0:17:36.04:0,36,356	0/0:14,0:14:36.08:0,36,367	0/0:13,0:13:33.06:0,33,332	0/0:22,0:22:66.14:0,66,668	0/0:5,0:5:15.03:0,15,152
chr10	1712096	.	TTCTCTC	T	842.92	PASS	AB=0.900;AC=8;AF=0.154;AN=52;BaseQRankSum=2.777;DP=580;FS=4.360;HRun=0;HaplotypeScore=127.5443;InbreedingCoeff=0.4481;MQ=67.76;MQ0=9;MQRankSum=1.323;QD=10.95;ReadPosRankSum=2.254;VQSLOD=2.7023;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:9,0:9:6:0,6,106	./.	0/0:30,0:17:0.47:0,0,1	0/0:23,0:23:26.96:0,27,629	0/0:19,0:19:18.42:0,18,335	0/0:23,0:27:19.41:0,19,386	0/0:27,0:27:2.98:0,3,8	0/0:25,0:25:21.01:0,21,414	0/1:9,0:12:19.86:93,0,20	0/0:13,0:13:3.01:0,3,50	0/0:32,0:31:24.03:0,24,415	0/0:20,0:20:15.51:0,16,300	0/0:23,0:23:21.03:0,21,378	0/0:28,0:27:3.70:0,4,383	0/0:28,0:28:29.22:0,29,690	0/0:14,0:14:12.01:0,12,158	0/0:15,0:15:18.02:0,18,414	0/0:25,0:24:5.86:0,6,298	0/0:16,0:16:3.01:0,3,44	0/0:29,0:28:47.71:0,48,974	0/0:17,0:17:20.18:0,20,328	0/1:12,0:12:70.53:71,0,214	0/0:21,0:23:26.12:0,26,638	0/0:15,0:15:15.02:0,15,261	1/1:14,7:21:21.07:414,21,0	1/1:13,9:22:1.31:58,1,0	1/1:10,0:9:18.06:344,18,0
chr10	1713258	.	C	CAT	1152.57	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-6.979;DP=887;FS=2.724;HRun=0;HaplotypeScore=102.2096;InbreedingCoeff=0.9991;MQ=69.59;MQ0=0;MQRankSum=-0.871;QD=36.02;ReadPosRankSum=-0.567;VQSLOD=5.6314;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,105,1462	0/0:15,0:15:42.13:0,42,582	0/0:16,0:14:36.05:0,36,461	0/0:22,0:18:28.25:0,28,465	0/0:33,0:33:99:0,99,1373	0/0:24,0:24:63.16:0,63,858	0/0:35,0:35:96.28:0,96,1320	0/0:45,0:45:99:0,120,1575	0/0:38,0:38:99:0,105,1410	0/0:39,0:39:99:0,111,1535	0/0:31,0:31:87.23:0,87,1173	0/0:40,0:40:99:0,114,1521	0/0:25,0:25:75.22:0,75,1034	0/0:29,0:29:87.26:0,87,1210	0/0:53,0:53:99:0,153,2130	0/0:37,0:37:99:0,102,1367	1/1:2,29:32:69.24:1247,69,0	0/0:22,0:22:60.16:0,60,819	0/0:26,0:26:72.15:0,72,879	0/0:36,0:36:99:0,99,1324	0/0:50,0:50:99:0,147,2024	0/0:36,0:36:99:0,105,1430	0/0:30,0:30:78.22:0,78,1057	0/0:33,0:33:96.30:0,96,1355	0/0:27,0:27:81.21:0,81,1081	0/0:27,0:27:78.25:0,78,1098	0/0:32,0:32:93.19:0,93,1233	0/0:17,0:17:51.17:0,51,728
chr10	1715179	.	A	ATC	3738.04	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=11.957;DP=657;FS=0.000;HRun=0;HaplotypeScore=81.5917;InbreedingCoeff=0.9993;MQ=82.85;MQ0=0;MQRankSum=-3.464;QD=51.21;ReadPosRankSum=1.507;VQSLOD=4.3704;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,43:44:99:2149,117,0	0/0:11,0:11:33.11:0,33,538	0/0:20,0:20:50.82:0,51,724	0/0:19,0:19:30.91:0,31,582	0/0:30,0:30:90.26:0,90,1438	0/0:19,0:19:57.19:0,57,930	0/0:16,0:16:48.16:0,48,783	0/0:31,0:31:93.32:0,93,1476	0/0:23,0:23:69.24:0,69,1126	0/0:43,0:43:99:0,129,2104	0/0:27,0:27:75.26:0,75,1222	0/0:16,0:16:48.16:0,48,775	0/0:16,0:16:48.16:0,48,780	0/0:23,0:23:69.24:0,69,1125	0/0:30,0:30:90.31:0,90,1469	0/0:14,0:14:42.14:0,42,685	1/1:0,29:29:84.29:1589,84,0	0/0:11,0:11:33.11:0,33,539	0/0:15,0:15:45.13:0,45,708	0/0:34,0:34:99:0,102,1610	0/0:28,0:28:84.27:0,84,1346	0/0:20,0:20:60.17:0,60,949	0/0:11,0:11:33.11:0,33,531	0/0:16,0:16:48.14:0,48,728	0/0:33,0:33:99:0,99,1593	0/0:31,0:31:93.30:0,93,1492	0/0:30,0:29:90.31:0,90,1462	0/0:17,0:17:51.17:0,51,816
chr10	1716250	.	C	CTTCA	2127.21	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-9.551;DP=730;FS=0.678;HRun=0;HaplotypeScore=111.4180;InbreedingCoeff=0.8586;MQ=68.32;MQ0=2;MQRankSum=2.703;QD=29.96;ReadPosRankSum=-1.091;VQSLOD=3.4627;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:22:15.87:0,16,134	0/0:11,0:11:24.07:0,24,359	0/0:24,0:19:3.01:0,3,45	0/0:14,0:11:9.03:0,9,136	0/0:33,0:33:51.16:0,51,787	0/0:23,0:23:54.17:0,54,826	0/0:15,0:15:33.10:0,33,497	0/0:34,0:34:36.09:0,36,477	1/1:17,18:35:36.12:860,36,0	0/0:36,0:36:80.99:0,81,1209	0/0:26,0:26:51.16:0,51,784	0/0:27,0:27:57.16:0,57,843	0/0:31,0:31:60.11:0,60,895	0/0:27,0:27:54.17:0,54,827	0/0:44,0:44:93.29:0,93,1423	0/0:32,0:32:66.16:0,66,928	0/0:5,0:14:9.01:0,9,84	0/0:11,0:11:21.07:0,21,333	0/0:25,0:24:30.08:0,30,435	0/0:31,0:31:72.22:0,72,1095	0/0:31,0:31:63.16:0,63,923	0/0:27,0:27:44.17:0,44,649	0/0:20,0:20:30.10:0,30,476	0/0:26,0:26:69.19:0,69,1018	0/0:33,0:33:78.26:0,78,1210	1/1:15,21:36:63.20:1388,63,0	0/0:27,0:27:54.18:0,54,833	0/0:15,0:15:33.11:0,33,517
chr10	1716706	.	CT	C	948.54	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.823;DP=584;FS=0.638;HRun=9;HaplotypeScore=57.9896;InbreedingCoeff=0.9486;MQ=81.86;MQ0=0;MQRankSum=-2.756;QD=21.56;ReadPosRankSum=2.119;VQSLOD=4.3266;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,42:44:99:1043,114,0	0/0:17,0:17:45.13:0,45,519	0/0:20,0:19:37.67:0,38,442	0/0:15,0:15:11.70:0,12,319	0/0:14,0:14:30.09:0,30,346	0/0:16,0:15:39.12:0,39,450	0/0:24,0:24:63.18:0,63,718	0/0:31,0:31:72.19:0,72,806	0/0:23,0:23:66.18:0,66,752	0/0:19,0:19:50.41:0,50,565	0/0:8,0:8:21.05:0,21,234	0/0:26,0:26:72.19:0,72,813	0/0:20,0:20:51.15:0,51,585	0/0:17,0:17:51.12:0,51,569	0/0:23,0:24:63.02:0,63,707	0/0:24,0:24:66.19:0,66,753	0/0:18,0:18:48.14:0,48,554	0/0:13,0:13:33.10:0,33,381	0/0:19,0:20:47.97:0,48,531	0/0:22,0:22:63.19:0,63,727	0/0:45,0:45:99:0,123,1409	0/0:14,0:14:33.10:0,33,381	0/0:15,0:16:38.94:0,39,425	0/0:26,0:26:69.21:0,69,796	0/0:25,0:25:72.16:0,72,800	0/0:15,0:15:39.12:0,39,450	0/0:22,0:22:54.12:0,54,602	0/0:6,0:6:15.04:0,15,173
chr10	1716862	.	TAC	T	359.57	PASS	AB=0.956;AC=22;AF=0.423;AN=52;BaseQRankSum=3.842;DP=632;FS=10.838;HRun=0;HaplotypeScore=88.2085;InbreedingCoeff=-0.0281;MQ=52.45;MQ0=20;MQRankSum=0.430;QD=0.88;ReadPosRankSum=-0.797;VQSLOD=0.7657;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:31,0:29:4.11:4,0,38	0/0:9,0:9:9.03:0,9,118	./.	./.	0/1:23,0:23:0.40:0,0,215	0/0:25,0:25:11.92:0,12,143	1/1:28,0:28:9.59:76,10,0	0/0:12,0:12:1.55:0,2,4	1/1:17,0:18:5.43:25,5,0	0/0:26,0:26:1.46:0,1,43	0/1:17,0:17:22.21:22,0,58	0/1:22,0:22:9.78:10,0,113	0/1:14,0:14:1.49:1,0,79	0/0:23,0:22:12.66:0,13,142	0/0:15,0:15:1.17:0,1,83	0/1:10,4:14:23.12:23,0,77	0/1:28,0:34:7.90:8,0,18	0/1:17,2:18:77.15:77,0,202	0/0:14,0:12:6.01:0,6,71	0/0:19,0:19:1.81:0,2,105	0/1:48,0:47:5.63:6,0,198	0/1:12,0:12:7.30:7,0,22	0/0:15,0:14:9.01:0,9,105	0/1:54,0:54:12.56:13,0,529	0/1:30,1:31:41.68:42,0,144	1/1:18,0:18:7.96:45,8,0	1/1:6,7:13:5.88:64,6,0	1/1:10,1:11:9:85,9,0
chr10	1718564	.	AGT	A	561.40	PASS	AB=0.923;AC=19;AF=0.380;AN=50;BaseQRankSum=3.567;DP=615;FS=6.500;HRun=0;HaplotypeScore=76.7629;InbreedingCoeff=-0.3044;MQ=71.31;MQ0=17;MQRankSum=2.294;QD=1.62;ReadPosRankSum=1.913;VQSLOD=0.9215;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:37:11.95:0,12,109	0/0:6,0:5:5.85:0,6,58	./.	./.	0/1:20,0:18:26.21:26,0,155	0/1:15,2:17:11.57:12,0,179	0/0:20,0:20:11.62:0,12,120	0/0:30,0:28:12:0,12,131	0/0:12,0:24:18.49:0,18,191	0/0:29,0:27:24.07:0,24,337	0/1:8,3:11:11.36:11,0,219	0/1:17,0:17:30.07:30,0,254	0/1:15,0:14:46.48:46,0,74	0/1:14,1:17:20.58:21,0,234	0/1:34,0:34:72.90:73,0,367	0/0:18,3:21:0.17:0,0,340	0/1:19,0:20:2.27:2,0,318	0/1:19,1:19:43.13:43,0,92	./.	0/0:21,0:21:12.29:0,12,122	0/1:34,8:41:5.75:6,0,228	0/1:23,1:24:37.32:37,0,208	0/1:10,0:10:8:15,0,8	0/1:30,0:30:29.59:30,0,378	0/1:21,2:23:11.35:11,0,233	1/1:10,5:14:17.68:140,18,0	1/1:15,3:18:2.84:32,3,0	0/1:6,6:10:18.24:173,0,18
chr10	1724137	.	T	TAACA	4977.97	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-9.092;DP=660;FS=4.508;HRun=0;HaplotypeScore=100.8508;InbreedingCoeff=0.9475;MQ=78.33;MQ0=0;MQRankSum=-3.107;QD=66.37;ReadPosRankSum=1.085;VQSLOD=6.8065;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,40:51:99:3459,135,0	0/0:9,0:9:27.09:0,27,504	0/0:14,0:14:27.08:0,27,501	0/0:15,0:15:38.48:0,38,631	0/0:19,0:19:48.16:0,48,884	0/0:28,0:28:78.26:0,78,1456	0/0:26,0:26:75.24:0,75,1356	0/0:38,0:38:84.28:0,84,1529	0/0:19,0:19:57.20:0,57,1057	0/0:20,0:20:60.21:0,60,1117	0/0:17,0:17:45.15:0,45,840	0/0:20,0:20:54.18:0,54,997	0/0:22,0:22:63.20:0,63,1145	0/0:20,0:20:51.16:0,51,921	0/0:24,0:24:66.23:0,66,1232	0/0:19,0:19:48.15:0,48,865	1/1:2,21:23:56.87:1519,57,0	0/0:13,0:13:39.13:0,39,728	0/0:26,0:26:75.26:0,75,1391	0/0:35,0:35:93.25:0,93,1655	0/0:26,0:26:72.25:0,72,1333	0/0:24,0:24:63.20:0,63,1136	0/0:33,0:33:84.29:0,84,1558	0/0:40,0:40:99:0,108,1996	0/0:22,0:22:63.18:0,63,1074	0/0:25,0:25:66.23:0,66,1223	0/0:29,0:29:87.26:0,87,1570	0/0:2,0:2:6.02:0,6,112
chr10	1724274	.	G	GT	683.33	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-6.159;DP=566;FS=6.114;HRun=9;HaplotypeScore=55.5424;InbreedingCoeff=0.8756;MQ=74.43;MQ0=1;MQRankSum=-0.460;QD=19.52;ReadPosRankSum=1.350;VQSLOD=4.1719;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:40:99:0,108,936	0/0:10,0:10:26.98:0,27,231	0/0:21,0:19:32.63:0,33,315	0/0:12,1:11:13.53:0,14,92	0/0:24,0:24:68.02:0,68,579	0/0:28,0:28:77.98:0,78,677	0/0:13,0:13:35.99:0,36,313	0/0:37,0:37:95.94:0,96,825	0/0:16,0:16:41.97:0,42,360	0/0:20,0:20:44.98:0,45,389	0/0:27,0:27:36.99:0,37,538	0/0:15,0:15:38.96:0,39,334	0/0:19,0:19:50.97:0,51,438	0/0:16,0:16:41.99:0,42,365	0/0:22,0:22:59.94:0,60,514	0/0:18,0:18:44.99:0,45,391	1/1:3,32:35:29.13:778,29,0	0/0:14,0:14:16.39:0,16,285	0/0:18,0:18:47.99:0,48,416	0/0:28,0:28:65.26:0,65,571	0/0:19,0:19:47.96:0,48,413	0/0:17,0:17:41.97:0,42,359	0/0:13,0:13:35.98:0,36,310	0/0:22,0:22:65.97:0,66,568	0/0:14,0:14:38.99:0,39,339	0/0:19,0:19:50.98:0,51,443	0/0:24,0:24:71.95:0,72,616	0/0:2,0:2:6:0,6,52
chr10	1725126	.	TAACC	T	2609.40	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.152;DP=809;FS=7.685;HRun=0;HaplotypeScore=129.8411;InbreedingCoeff=0.9997;MQ=83.25;MQ0=1;MQRankSum=-6.295;QD=38.37;ReadPosRankSum=2.683;VQSLOD=3.9531;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,46:49:99:1953,99,0	0/0:10,0:10:30.10:0,30,816	0/0:29,0:29:81.28:0,81,2059	0/0:23,0:23:61.19:0,61,1503	0/0:35,0:35:99:0,105,2925	0/0:28,0:28:78.26:0,78,2111	0/0:32,0:32:96.32:0,96,2627	0/0:42,0:42:99:0,123,3322	0/0:27,0:27:81.28:0,81,2259	0/0:33,0:33:96.32:0,96,2577	0/0:19,0:19:53.77:0,54,1412	0/0:31,0:31:93.32:0,93,2600	0/0:23,0:23:69.24:0,69,1846	0/0:26,0:26:75.26:0,75,1994	0/0:41,0:41:99:0,123,3439	0/0:34,0:34:99:0,102,2822	1/1:0,19:18:39.13:778,39,0	0/0:20,0:20:60.21:0,60,1619	0/0:20,0:20:60.21:0,60,1675	0/0:38,0:37:99:0,114,3054	0/0:48,0:48:99:0,144,3942	0/0:26,0:26:72.25:0,72,2005	0/0:34,0:34:99:0,99,2715	0/0:33,0:33:96.33:0,96,2663	0/0:26,0:26:78.27:0,78,2157	0/0:25,0:25:72.25:0,72,1991	0/0:22,0:22:63.22:0,63,1760	0/0:16,0:16:48.16:0,48,1239
chr10	1726225	.	C	CGTGTGTGTGTGTGT	1415.75	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=2.766;DP=747;FS=4.176;HRun=0;HaplotypeScore=267.7557;InbreedingCoeff=0.9724;MQ=57.12;MQ0=8;MQRankSum=-5.993;QD=19.94;ReadPosRankSum=-0.819;VQSLOD=2.1677;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:26,14:46:11.79:644,12,0	0/0:17,0:17:33.58:0,34,1091	0/0:43,0:16:15.32:0,15,581	0/0:41,0:19:26.30:0,26,768	0/0:16,0:15:39.12:0,39,1386	0/0:24,0:24:50.39:0,50,1697	0/0:29,0:30:71.91:0,72,2418	0/0:33,0:33:51.16:0,51,1540	0/0:25,0:27:69.22:0,69,2487	0/0:21,0:21:51.12:0,51,1683	0/0:20,0:20:45.15:0,45,1665	0/0:22,0:22:60.21:0,60,2356	0/0:26,0:26:69.23:0,69,2289	0/0:21,0:21:51.17:0,51,2046	0/0:32,0:32:75.26:0,75,2963	0/0:35,0:35:84.21:0,84,2702	1/1:12,0:25:21.07:887,21,0	0/0:29,0:29:72.08:0,72,2222	0/0:20,0:22:45.15:0,45,1338	0/0:23,0:23:57.16:0,57,1871	0/0:30,0:29:63.22:0,63,2195	0/0:26,0:27:63.20:0,63,2081	0/0:21,0:21:45.15:0,45,1651	0/0:25,0:25:54.19:0,54,2015	0/0:18,0:19:36.12:0,36,1338	0/0:29,0:30:84.29:0,84,3069	0/0:24,0:24:51.17:0,51,1725	0/0:18,0:18:48.11:0,48,1494
chr10	1727675	.	A	ATG	488.33	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.921;DP=667;FS=2.506;HRun=0;HaplotypeScore=83.8539;InbreedingCoeff=0.9984;MQ=76.64;MQ0=0;MQRankSum=-5.855;QD=37.56;ReadPosRankSum=0.784;VQSLOD=5.8675;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:84.26:0,84,1336	0/0:12,0:12:36.12:0,36,587	0/0:15,0:15:42.14:0,42,640	0/0:11,0:11:33.11:0,33,537	0/0:39,0:39:99:0,114,1810	0/0:17,0:17:51.16:0,51,807	0/0:30,0:30:87.30:0,87,1413	0/0:23,0:23:69.24:0,69,1117	0/0:37,0:37:99:0,111,1805	0/0:34,0:34:99:0,102,1598	0/0:30,0:30:87.29:0,87,1391	0/0:28,0:28:84.27:0,84,1344	0/0:21,0:21:63.19:0,63,978	0/0:22,0:22:66.21:0,66,1053	0/0:25,0:25:75.24:0,75,1197	0/0:27,0:27:81.27:0,81,1290	1/1:1,12:13:36.12:583,36,0	0/0:18,0:18:51.14:0,51,781	0/0:20,0:20:60.20:0,60,975	0/0:21,0:21:63.21:0,63,997	0/0:25,0:25:69.24:0,69,1120	0/0:31,0:31:90.30:0,90,1443	0/0:30,0:30:87.28:0,87,1386	0/0:17,0:17:51.17:0,51,829	0/0:30,0:30:90.31:0,90,1467	0/0:32,0:32:96.31:0,96,1515	0/0:22,0:21:66.21:0,66,1050	0/0:9,0:9:27.09:0,27,440
chr10	1727679	.	AACAGAGG	A	766.64	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.878;DP=665;FS=2.496;HRun=0;HaplotypeScore=153.0300;InbreedingCoeff=0.9986;MQ=76.03;MQ0=0;MQRankSum=-5.911;QD=63.89;ReadPosRankSum=1.077;VQSLOD=3.9755;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:81.28:0,81,3275	0/0:14,0:14:42.11:0,42,1622	0/0:13,0:13:39.11:0,39,1112	0/0:12,0:12:36.12:0,36,1258	0/0:38,0:38:99:0,111,4596	0/0:19,0:19:57.20:0,57,2391	0/0:31,0:31:93.32:0,93,3697	0/0:23,0:23:69.24:0,69,2865	0/0:37,0:37:99:0,111,4357	0/0:33,0:33:99:0,99,4155	0/0:29,0:29:87.29:0,87,3386	0/0:27,0:27:81.28:0,81,3272	0/0:21,0:21:63.21:0,63,2321	0/0:22,0:22:66.21:0,66,2661	0/0:26,0:26:78.27:0,78,3134	0/0:26,0:26:78.27:0,78,3049	1/1:0,12:12:36.12:861,36,0	0/0:17,0:17:51.17:0,51,2039	0/0:19,0:19:54.19:0,54,2251	0/0:22,0:22:66.23:0,66,2714	0/0:24,0:24:72.25:0,72,2972	0/0:32,0:32:90.31:0,90,3647	0/0:28,0:28:81.25:0,81,3174	0/0:18,0:18:54.19:0,54,2251	0/0:30,0:30:90.29:0,90,3639	0/0:32,0:32:93.32:0,93,3827	0/0:23,0:22:69.24:0,69,2799	0/0:10,0:10:27.09:0,27,1133
chr10	1727743	.	TGA	T	424.43	PASS	AB=0.531;AC=1;AF=0.018;AN=56;BaseQRankSum=7.235;DP=676;FS=21.176;HRun=0;HaplotypeScore=90.1533;InbreedingCoeff=0.0495;MQ=70.18;MQ0=1;MQRankSum=-6.913;QD=16.32;ReadPosRankSum=-0.042;VQSLOD=1.7327;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:3,23:26:14.26:499,0,14	0/0:17,0:17:51.17:0,51,999	0/0:14,0:12:30.88:0,31,498	0/0:10,0:9:26.88:0,27,396	0/0:30,0:30:90.31:0,90,1803	0/0:19,0:19:57.20:0,57,1142	0/0:32,0:32:96.28:0,96,1817	0/0:26,0:26:78.26:0,78,1546	0/0:35,0:35:99:0,105,2083	0/0:31,0:31:93.32:0,93,1858	0/0:22,0:22:66.23:0,66,1327	0/0:24,0:24:72.25:0,72,1440	0/0:28,0:28:84.29:0,84,1701	0/0:19,0:19:57.20:0,57,1146	0/0:25,0:25:75.26:0,75,1513	0/0:30,0:30:90.31:0,90,1817	0/0:30,0:30:81.28:0,81,1618	0/0:20,0:20:60.21:0,60,1218	0/0:19,0:19:57.15:0,57,1075	0/0:22,0:22:60.21:0,60,1200	0/0:29,0:29:87.30:0,87,1767	0/0:34,0:34:99:0,102,2006	0/0:33,0:33:99:0,99,2011	0/0:23,0:23:69.24:0,69,1401	0/0:17,0:17:51.17:0,51,1015	0/0:31,0:31:93.28:0,93,1835	0/0:24,0:23:72.25:0,72,1454	0/0:5,0:5:15.05:0,15,305
chr10	1727747	.	AAAGTAAC	A	1141.88	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.439;DP=688;FS=23.585;HRun=0;HaplotypeScore=158.6647;InbreedingCoeff=0.9921;MQ=70.22;MQ0=1;MQRankSum=-7.044;QD=43.92;ReadPosRankSum=-0.136;VQSLOD=1.6355;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,23:26:22.69:1235,23,0	0/0:18,0:18:54.19:0,54,2265	0/0:15,0:13:38.72:0,39,1348	0/0:11,0:9:27.04:0,27,845	0/0:29,0:29:87.28:0,87,3418	0/0:19,0:19:57.20:0,57,2357	0/0:30,0:30:90.31:0,90,3694	0/0:30,0:30:90.31:0,90,3668	0/0:35,0:35:99:0,105,3993	0/0:30,0:30:87.30:0,87,3548	0/0:24,0:24:72.25:0,72,2939	0/0:26,0:26:78.27:0,78,3245	0/0:29,0:29:87.30:0,87,3618	0/0:19,0:19:57.20:0,57,2340	0/0:27,0:27:81.28:0,81,3342	0/0:30,0:30:90.30:0,90,3667	0/0:30,0:30:87.30:0,87,3470	0/0:21,0:21:63.22:0,63,2570	0/0:17,0:17:51.17:0,51,1906	0/0:21,0:21:60.21:0,60,2471	0/0:29,0:29:87.30:0,87,3534	0/0:34,0:34:99:0,102,4239	0/0:33,0:33:99:0,99,4142	0/0:24,0:24:72.23:0,72,2922	0/0:18,0:18:54.19:0,54,2179	0/0:30,0:30:87.30:0,87,3501	0/0:26,0:25:78.25:0,78,3164	0/0:7,0:7:21.07:0,21,864
chr10	1730100	.	C	CACACAG	1098.05	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=1.667;DP=791;FS=1.777;HRun=0;HaplotypeScore=158.4409;InbreedingCoeff=0.6110;MQ=62.95;MQ0=12;MQRankSum=-4.220;QD=16.15;ReadPosRankSum=-1.145;VQSLOD=3.0605;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:32:14.28:116,0,14	0/0:19,0:19:54.15:0,54,1171	0/0:48,0:8:18.02:0,18,272	0/0:41,0:16:9.30:0,9,354	0/0:27,0:27:71.60:0,72,1341	0/0:22,0:22:60.11:0,60,1085	0/0:33,0:33:95.71:0,96,1878	0/0:23,0:23:63.18:0,63,1119	0/0:24,0:24:71.97:0,72,1539	0/0:26,0:26:78.20:0,78,1495	0/0:28,0:27:78.13:0,78,1382	0/0:36,0:36:99:0,102,2157	0/0:27,0:27:75.12:0,75,1390	0/0:30,0:30:87.17:0,87,1706	0/0:26,0:26:78.15:0,78,1530	0/0:33,0:33:88.87:0,89,2019	1/1:1,24:35:36.12:1088,36,0	0/0:11,0:11:29.74:0,30,495	0/0:29,0:29:84.16:0,84,1470	0/0:28,0:28:75.20:0,75,1612	0/0:50,0:50:99:0,144,2919	0/0:25,0:25:72.15:0,72,1404	0/0:30,0:30:87.08:0,87,1583	0/0:34,0:34:99:0,99,2087	0/0:15,0:15:45.09:0,45,839	0/0:24,0:24:68.91:0,69,1234	0/0:30,0:29:84.23:0,84,1813	0/0:3,0:3:9.03:0,9,217
chr10	1730485	.	TGTGCATGTGTGC	T	772.20	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.224;DP=838;FS=0.000;HRun=0;HaplotypeScore=270.8696;InbreedingCoeff=0.7882;MQ=57.47;MQ0=3;MQRankSum=-2.937;QD=24.91;ReadPosRankSum=-0.504;VQSLOD=2.3013;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:88.20:0,88,5105	0/0:6,0:6:17.99:0,18,621	0/0:37,0:24:56.23:0,56,1824	0/0:29,0:25:71.80:0,72,1748	0/0:26,0:26:75.17:0,75,3467	0/0:25,0:25:63.12:0,63,2476	0/0:42,0:42:99:0,117,4529	0/0:34,0:34:90.25:0,90,3496	0/0:21,0:21:60.15:0,60,3127	0/0:31,0:31:84.25:0,84,4641	0/0:16,0:16:45.11:0,45,1746	0/0:32,0:32:90.23:0,90,4191	0/0:26,0:26:75.17:0,75,3600	0/0:28,0:28:78.21:0,78,3875	0/0:30,0:30:62:0,62,3968	0/0:34,0:34:99:0,102,5500	1/1:3,28:31:3.09:850,3,0	0/0:46,0:46:99:0,136,5474	0/0:28,0:27:72.08:0,72,2252	0/0:30,0:30:78.23:0,78,3601	0/0:77,0:77:99:0,223,10682	0/0:24,0:24:63.20:0,63,3490	0/0:17,0:17:48.15:0,48,2421	0/0:39,0:39:99:0,108,4981	0/0:18,0:18:54.16:0,54,2887	0/0:21,0:21:57.19:0,57,3034	0/0:30,0:30:87.14:0,87,4371	0/0:9,0:9:27.04:0,27,616
chr10	1731123	.	ATG	A	1436.32	PASS	AB=0.819;AC=35;AF=0.833;AN=42;BaseQRankSum=2.446;DP=623;FS=13.240;HRun=0;HaplotypeScore=88.9591;InbreedingCoeff=-0.1229;MQ=63.10;MQ0=16;MQRankSum=0.747;QD=3.38;ReadPosRankSum=0.455;VQSLOD=1.2090;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	1/1:5,0:6:8.79:64,9,0	0/0:47,0:28:0:0,0,0	./.	1/1:14,0:14:2.99:23,3,0	1/1:10,2:14:11.66:92,12,0	1/1:25,5:30:11.86:110,12,0	./.	0/1:25,1:26:17.91:26,0,18	1/1:24,3:27:2.99:32,3,0	./.	1/1:18,6:24:18.04:193,18,0	1/1:23,2:28:23.43:171,23,0	1/1:18,0:20:5.58:46,6,0	1/1:22,4:27:14.87:143,15,0	0/1:14,9:23:6.87:143,0,7	./.	1/1:12,1:12:1.28:55,1,0	1/1:15,0:15:2.84:14,3,0	0/1:15,2:17:23.39:23,0,47	1/1:39,3:42:14.70:124,15,0	1/1:15,4:19:3:32,3,0	./.	0/1:17,6:23:26.58:114,0,27	1/1:12,3:16:5.85:46,6,0	0/1:15,0:22:1.75:35,0,2	1/1:9,0:15:11.36:56,11,0	./.
chr10	1731467	.	T	TGCTTAG	1492.97	PASS	AB=0.610;AC=1;AF=0.018;AN=56;BaseQRankSum=3.709;DP=702;FS=2.120;HRun=0;HaplotypeScore=147.3481;InbreedingCoeff=0.0085;MQ=85.92;MQ0=0;MQRankSum=-6.787;QD=59.72;ReadPosRankSum=-1.175;VQSLOD=3.8396;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,123,2707	0/0:12,0:12:30.10:0,30,690	0/0:26,0:26:62.67:0,63,1133	0/0:21,0:21:45.04:0,45,767	0/0:25,0:25:72.18:0,72,1559	0/0:23,0:23:69.22:0,69,1563	0/0:42,0:42:99:0,123,2825	0/0:39,0:39:99:0,114,2487	0/0:25,0:25:75.19:0,75,1614	0/0:23,0:23:66.21:0,66,1454	0/0:14,0:14:39.13:0,39,909	0/0:20,0:20:51.18:0,51,1168	0/0:36,0:36:96.33:0,96,2219	0/0:28,0:28:81.26:0,81,1797	0/0:30,0:30:84.25:0,84,1891	0/0:25,0:25:75.24:0,75,1703	0/1:9,13:25:18.64:1567,0,19	0/0:26,0:26:72.23:0,72,1587	0/0:17,0:17:51.12:0,51,1134	0/0:18,0:18:48.16:0,48,1077	0/0:44,0:44:99:0,123,2763	0/0:12,0:12:30.10:0,30,644	0/0:15,0:15:42.14:0,42,927	0/0:41,0:41:99:0,114,2545	0/0:16,0:16:45.15:0,45,1050	0/0:21,0:21:63.22:0,63,1469	0/0:23,0:23:69.15:0,69,1442	0/0:9,0:9:27.09:0,27,630
chr10	1731658	.	AG	A	1803.72	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=11.564;DP=624;FS=2.516;HRun=1;HaplotypeScore=75.0984;InbreedingCoeff=0.9993;MQ=86.54;MQ0=0;MQRankSum=-6.326;QD=33.40;ReadPosRankSum=0.653;VQSLOD=3.4063;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,26:26:72.23:922,72,0	0/0:11,0:11:33.11:0,33,527	0/0:17,0:17:45.06:0,45,628	0/0:26,0:26:53.06:0,53,848	0/0:21,0:21:63.21:0,63,1005	0/0:27,0:27:81.25:0,81,1246	0/0:25,0:25:75.26:0,75,1199	0/0:32,0:32:96.33:0,96,1533	0/0:29,0:29:87.30:0,87,1391	0/0:28,0:28:84.29:0,84,1343	0/0:13,0:13:39.13:0,39,617	0/0:19,0:19:57.19:0,57,908	0/0:20,0:20:60.20:0,60,958	0/0:25,0:25:75.24:0,75,1174	0/0:21,0:21:63.21:0,63,1007	0/0:21,0:21:63.21:0,63,1007	1/1:0,27:27:78.25:1004,78,0	0/0:23,0:23:69.24:0,69,1103	0/0:20,0:20:60.20:0,60,960	0/0:24,0:24:72.23:0,72,1127	0/0:39,0:39:99:0,117,1870	0/0:24,0:24:69.24:0,69,1099	0/0:16,0:16:48.16:0,48,764	0/0:18,0:17:54.18:0,54,857	0/0:24,0:24:72.25:0,72,1141	0/0:14,0:14:42.13:0,42,648	0/0:24,0:24:69.22:0,69,1079	0/0:9,0:9:27.09:0,27,431
chr10	1731723	.	TTCTCTCTC	T	741.99	PASS	AC=8;AF=0.160;AN=50;BaseQRankSum=3.499;DP=567;FS=16.531;HRun=0;HaplotypeScore=145.1782;InbreedingCoeff=0.7057;MQ=67.27;MQ0=14;MQRankSum=-5.225;QD=10.91;ReadPosRankSum=-0.515;VQSLOD=1.5555;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:18:12.04:0,12,281	0/0:12,0:12:9.03:0,9,223	0/0:25,0:15:0.47:0,0,1	./.	0/0:24,0:23:12:0,12,153	0/0:18,0:17:12.04:0,12,400	0/0:16,0:19:24.07:0,24,668	./.	1/1:14,4:18:8.90:223,9,0	0/0:22,0:27:36.61:0,37,640	0/0:19,0:19:6.01:0,6,88	0/0:16,0:18:12.04:0,12,451	0/0:24,0:24:30.10:0,30,962	0/0:20,0:20:21.03:0,21,430	1/1:11,6:18:18.06:428,18,0	1/1:14,3:16:3.01:74,3,0	0/0:23,0:23:18.95:0,19,490	0/0:13,0:14:12.02:0,12,288	0/0:22,0:21:9.02:0,9,170	./.	0/0:22,0:21:18.06:0,18,566	0/0:17,0:20:9.03:0,9,174	0/0:24,0:23:24.05:0,24,520	0/0:18,0:17:27.08:0,27,714	1/1:11,4:15:5.64:148,6,0	0/0:17,0:14:15.05:0,15,405	0/0:10,0:15:21.05:0,21,377	0/0:11,0:9:3:0,3,25
chr10	1733802	.	CGGG	C	870.94	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.802;DP=659;FS=0.837;HRun=7;HaplotypeScore=100.2265;InbreedingCoeff=0.9049;MQ=88.80;MQ0=0;MQRankSum=-3.516;QD=34.84;ReadPosRankSum=1.614;VQSLOD=2.5736;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:81.32:0,81,1042	0/0:15,0:15:45.15:0,45,1004	0/0:18,0:18:51.16:0,51,1079	0/0:33,0:33:75.22:0,75,1534	0/0:27,0:27:72.24:0,72,1555	0/0:17,0:17:45.11:0,45,958	0/0:18,0:18:45.15:0,45,1005	0/0:36,0:36:90.24:0,90,1884	0/0:30,0:30:84.27:0,84,1831	0/0:27,0:27:72.14:0,72,1552	0/0:21,0:21:60.16:0,60,1291	0/0:26,0:26:72.22:0,72,1556	0/0:23,0:23:69.22:0,69,1492	0/0:25,0:25:72.23:0,72,1543	0/0:29,0:29:75.26:0,75,1662	0/0:18,0:18:54.16:0,54,1121	1/1:2,23:25:63.21:966,63,0	0/0:25,0:25:66.21:0,66,1402	0/0:19,0:20:51.15:0,51,1095	0/0:21,0:21:53.86:0,54,1178	0/0:26,0:27:81.25:0,81,1725	0/0:31,0:31:87.30:0,87,1940	0/0:17,0:17:42.14:0,42,938	0/0:26,0:26:75.26:0,75,1675	0/0:11,0:11:30.10:0,30,651	0/0:26,0:26:78.27:0,78,1715	0/0:28,0:27:81.24:0,81,1671	0/0:2,0:2:6.02:0,6,134
chr10	1733803	.	G	GGGGGT	2550.25	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-5.251;DP=660;FS=5.683;HRun=0;HaplotypeScore=127.0192;InbreedingCoeff=0.9049;MQ=88.64;MQ0=0;MQRankSum=-3.793;QD=55.44;ReadPosRankSum=1.558;VQSLOD=4.3473;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,31:46:93.78:2645,94,0	0/0:15,0:15:45.15:0,45,918	0/0:19,0:19:51.16:0,51,968	0/0:32,0:32:72.17:0,72,1280	0/0:27,0:27:69.22:0,69,1372	0/0:17,0:17:42.13:0,42,833	0/0:17,0:17:45.14:0,45,894	0/0:34,0:34:80.97:0,81,1506	0/0:28,0:28:84.25:0,84,1662	0/0:28,0:28:72.19:0,72,1379	0/0:20,0:20:60.15:0,60,1164	0/0:25,0:25:69.23:0,69,1345	0/0:23,0:23:66.21:0,66,1311	0/0:25,0:25:69.20:0,69,1351	0/0:28,0:28:75.21:0,75,1381	0/0:18,0:18:51.15:0,51,981	0/0:25,0:25:63.20:0,63,775	0/0:24,0:24:63.16:0,63,1224	0/0:21,0:21:51.16:0,51,980	0/0:21,0:21:51.16:0,51,1019	0/0:28,0:28:81.25:0,81,1578	0/0:31,0:31:87.27:0,87,1729	0/0:16,0:16:42.62:0,43,871	0/0:25,0:25:75.25:0,75,1517	0/0:11,0:11:30.09:0,30,586	0/0:26,0:26:78.24:0,78,1510	0/0:28,0:27:75.21:0,75,1438	0/0:2,0:2:6.02:0,6,124
chr10	1734706	.	TGCTG	T	1332.68	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.736;DP=743;FS=2.621;HRun=0;HaplotypeScore=118.7461;InbreedingCoeff=0.9998;MQ=72.48;MQ0=0;MQRankSum=-3.642;QD=47.60;ReadPosRankSum=1.802;VQSLOD=4.5579;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,120,3340	0/0:12,0:12:36.12:0,36,1007	0/0:32,0:32:90.31:0,90,2419	0/0:24,0:24:66.39:0,66,1756	0/0:32,0:32:96.32:0,96,2618	0/0:32,0:32:96.33:0,96,2676	0/0:22,0:22:63.22:0,63,1679	0/0:30,0:30:87.28:0,87,2301	0/0:32,0:32:96.33:0,96,2664	0/0:29,0:29:87.30:0,87,2353	0/0:18,0:18:54.17:0,54,1399	0/0:26,0:26:78.27:0,78,2182	0/0:19,0:19:57.20:0,57,1588	0/0:22,0:22:60.21:0,60,1665	0/0:32,0:32:96.33:0,96,2623	0/0:26,0:26:78.27:0,78,2125	1/1:0,28:28:72.25:1428,72,0	0/0:34,0:34:99:0,102,2839	0/0:21,0:21:60.21:0,60,1661	0/0:23,0:23:69.24:0,69,1931	0/0:39,0:39:99:0,114,3128	0/0:27,0:27:81.28:0,81,2224	0/0:28,0:28:81.28:0,81,2229	0/0:22,0:22:66.18:0,66,1772	0/0:18,0:18:54.19:0,54,1468	0/0:33,0:33:99:0,99,2764	0/0:26,0:26:78.25:0,78,2082	0/0:13,0:13:39.02:0,39,798
chr10	1735352	.	GATAATA	G	518.63	PASS	AB=1.000;AC=3;AF=0.056;AN=54;BaseQRankSum=5.480;DP=398;FS=5.929;HRun=0;HaplotypeScore=77.7257;InbreedingCoeff=0.5885;MQ=58.43;MQ0=1;MQRankSum=-6.049;QD=13.65;ReadPosRankSum=-0.163;VQSLOD=1.5787;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:10,21:31:36.03:612,36,0	0/0:5,0:5:12.01:0,12,271	0/1:7,0:5:2.89:3,0,63	0/0:4,0:3:2.99:0,3,24	0/0:18,0:18:33.11:0,33,936	0/0:24,0:25:63.14:0,63,1909	0/0:9,0:9:18.05:0,18,478	0/0:34,0:33:72.22:0,72,1763	0/0:13,0:14:33.04:0,33,773	0/0:18,0:18:33.10:0,33,973	0/0:15,0:15:36.03:0,36,1016	0/0:10,0:10:18.05:0,18,458	0/0:9,0:9:27.08:0,27,745	0/0:7,0:7:12.04:0,12,331	0/0:8,0:9:18.01:0,18,523	0/0:13,0:13:36.06:0,36,965	0/0:4,0:15:14.78:0,15,94	0/0:16,0:16:37.66:0,38,1099	0/0:13,0:13:26.57:0,27,724	0/0:14,0:14:30.09:0,30,794	0/0:12,0:12:33.09:0,33,816	./.	0/0:13,0:13:24.07:0,24,622	0/0:7,0:7:15.05:0,15,458	0/0:28,0:28:72.24:0,72,2009	0/0:19,0:19:33.10:0,33,941	0/0:26,0:26:69.18:0,69,1824	0/0:6,0:6:15.05:0,15,498
chr10	1735764	.	AGCAATT	A	2166.74	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=8.648;DP=588;FS=2.229;HRun=0;HaplotypeScore=123.3407;InbreedingCoeff=0.9935;MQ=90.05;MQ0=0;MQRankSum=-9.256;QD=54.17;ReadPosRankSum=-1.734;VQSLOD=3.4835;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,37:40:99:2262,99,0	0/0:7,0:7:21.07:0,21,748	0/0:23,0:23:60.18:0,60,1690	0/0:23,0:23:54.44:0,54,1500	0/0:17,0:17:51.18:0,51,1757	0/0:14,0:14:39.13:0,39,1347	0/0:21,0:21:63.22:0,63,2197	0/0:26,0:26:72.25:0,72,2559	0/0:15,0:15:45.15:0,45,1605	0/0:26,0:26:67.57:0,68,2457	0/0:17,0:17:48.16:0,48,1613	0/0:24,0:24:69.22:0,69,2333	0/0:20,0:20:54.19:0,54,1825	0/0:18,0:18:51.18:0,51,1803	0/0:28,0:28:75.26:0,75,2674	0/0:27,0:27:75.26:0,75,2547	0/0:18,0:18:54.17:0,54,1802	0/0:13,0:13:39.13:0,39,1262	0/0:14,0:14:36.12:0,36,1238	0/0:15,0:15:45.15:0,45,1597	0/0:56,0:56:99:0,163,5603	0/0:15,0:15:45.15:0,45,1542	0/0:23,0:23:66.23:0,66,2341	0/0:25,0:25:75.25:0,75,2530	0/0:14,0:14:36.12:0,36,1272	0/0:17,0:17:51.18:0,51,1799	0/0:24,0:24:69.22:0,69,2368	0/0:8,0:8:24.08:0,24,856
chr10	1736084	.	G	GCC	957.03	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-1.258;DP=668;FS=0.000;HRun=2;HaplotypeScore=88.1520;InbreedingCoeff=0.9791;MQ=72.93;MQ0=11;MQRankSum=-2.708;QD=36.81;ReadPosRankSum=0.726;VQSLOD=3.6710;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:39:72.23:0,72,1054	0/0:11,0:11:27.09:0,27,398	0/0:47,0:25:58.70:0,59,865	0/0:56,0:19:46.61:0,47,620	0/0:29,0:29:84.26:0,84,1192	0/0:20,0:19:54.18:0,54,794	0/0:22,0:22:57.19:0,57,833	0/0:20,0:20:60.20:0,60,866	0/0:15,0:15:39.13:0,39,572	0/0:22,0:22:63.18:0,63,904	0/0:14,0:14:39.13:0,39,572	0/0:20,0:20:57.19:0,57,835	0/0:21,0:21:57.19:0,57,838	0/0:8,0:8:21.06:0,21,289	0/0:25,0:25:75.25:0,75,1104	0/0:13,0:13:36.12:0,36,529	1/1:5,21:26:60.11:1052,60,0	0/0:20,0:20:60.16:0,60,832	0/0:15,0:15:45.15:0,45,661	0/0:21,0:21:60.17:0,60,834	0/0:61,0:61:99:0,169,2441	0/0:23,0:23:63.20:0,63,911	0/0:19,0:19:54.18:0,54,794	0/0:28,0:28:75.25:0,75,1095	0/0:20,0:20:60.18:0,60,860	0/0:27,0:27:72.06:0,72,1006	0/0:18,0:18:36.12:0,36,530	0/0:5,0:5:15.02:0,15,196
chr10	1736281	.	G	GA	593.71	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-6.114;DP=575;FS=24.483;HRun=7;HaplotypeScore=55.1656;InbreedingCoeff=0.9717;MQ=76.17;MQ0=0;MQRankSum=-0.497;QD=23.75;ReadPosRankSum=-0.208;VQSLOD=1.8610;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,20:25:57.17:689,57,0	0/0:9,0:9:24.04:0,24,232	0/0:18,0:18:26.85:0,27,251	0/0:8,0:8:13.30:0,13,131	0/0:33,0:33:99:0,99,956	0/0:25,0:25:72.11:0,72,695	0/0:12,0:12:33.05:0,33,319	0/0:33,0:32:84.12:0,84,807	0/0:16,0:16:48.08:0,48,463	0/0:24,0:24:60.09:0,60,579	0/0:25,0:25:75.12:0,75,724	0/0:12,0:12:36.06:0,36,348	0/0:17,0:17:45.07:0,45,435	0/0:12,0:12:33.05:0,33,319	0/0:22,0:22:60.10:0,60,579	0/0:20,0:20:54.07:0,54,516	0/0:22,0:22:57.07:0,57,544	0/0:18,0:18:48.08:0,48,464	0/0:23,0:23:48.06:0,48,464	0/0:36,0:36:93.14:0,93,898	0/0:19,0:19:54.05:0,54,509	0/0:22,0:22:60.03:0,60,568	0/0:24,0:24:63.10:0,63,608	0/0:15,0:15:45.07:0,45,435	0/0:29,0:28:81.13:0,81,782	0/0:23,0:23:66.10:0,66,633	0/0:25,0:25:69.11:0,69,666	0/0:8,0:8:24.04:0,24,232
chr10	1738785	.	T	TA	2755.08	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=12.337;DP=636;FS=0.000;HRun=1;HaplotypeScore=63.6654;InbreedingCoeff=0.9784;MQ=73.19;MQ0=0;MQRankSum=-0.197;QD=35.78;ReadPosRankSum=2.721;VQSLOD=3.8760;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,48:50:99:1888,126,0	0/0:10,0:10:30.08:0,30,375	0/0:7,0:7:16.84:0,17,205	0/0:12,0:12:30.07:0,30,358	0/0:21,0:21:63.19:0,63,803	0/0:29,0:29:81.26:0,81,1051	0/0:22,0:22:60.18:0,60,764	0/0:33,0:33:96.30:0,96,1220	0/0:25,0:25:75.23:0,75,961	0/0:35,0:35:99:0,99,1275	0/0:32,0:32:96.30:0,96,1231	0/0:25,0:25:75.24:0,75,974	0/0:28,0:28:81.26:0,81,1051	0/0:22,0:22:66.21:0,66,845	0/0:26,0:26:78.25:0,78,1012	0/0:24,0:24:72.23:0,72,935	1/1:1,26:27:66.22:989,66,0	0/0:15,0:15:42.10:0,42,515	0/0:16,0:16:48.12:0,48,581	0/0:18,0:18:54.16:0,54,678	0/0:30,0:30:90.28:0,90,1152	0/0:15,0:15:45.13:0,45,569	0/0:16,0:16:48.16:0,48,621	0/0:25,0:25:72.17:0,72,900	0/0:15,0:15:42.14:0,42,544	0/0:23,0:23:66.20:0,66,841	0/0:31,0:31:93.30:0,93,1206	0/0:4,0:4:12:0,12,124
chr10	1740576	.	GT	G	3042.04	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=11.574;DP=738;FS=0.892;HRun=2;HaplotypeScore=73.5297;InbreedingCoeff=0.9997;MQ=88.80;MQ0=0;MQRankSum=-5.162;QD=34.18;ReadPosRankSum=3.269;VQSLOD=3.9463;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,47:49:99:1684,132,0	0/0:17,0:17:51.16:0,51,744	0/0:37,0:37:99:0,99,1415	0/0:36,0:36:66.39:0,66,1310	0/0:27,0:27:81.27:0,81,1212	0/0:27,0:27:81.27:0,81,1213	0/0:14,0:14:42.10:0,42,605	0/0:39,0:39:99:0,117,1665	0/0:22,0:22:66.22:0,66,989	0/0:30,0:30:87.29:0,87,1304	0/0:24,0:24:72.23:0,72,1057	0/0:23,0:23:69.23:0,69,1034	0/0:23,0:23:66.21:0,66,969	0/0:23,0:23:66.21:0,66,970	0/0:28,0:28:84.27:0,84,1239	0/0:21,0:21:63.20:0,63,924	1/1:1,39:40:99:1479,114,0	0/0:13,0:13:39.13:0,39,584	0/0:20,0:20:60.19:0,60,871	0/0:32,0:32:96.33:0,96,1439	0/0:32,0:32:90.30:0,90,1346	0/0:27,0:27:81.27:0,81,1214	0/0:27,0:27:75.25:0,75,1123	0/0:21,0:21:57.14:0,57,791	0/0:28,0:27:81.27:0,81,1196	0/0:22,0:22:66.21:0,66,953	0/0:26,0:26:75.25:0,75,1122	0/0:10,0:10:30.05:0,30,404
chr10	1741177	.	CAT	C	2970.80	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=10.146;DP=613;FS=2.127;HRun=0;HaplotypeScore=74.2504;InbreedingCoeff=0.9789;MQ=81.70;MQ0=0;MQRankSum=-5.456;QD=39.09;ReadPosRankSum=1.691;VQSLOD=5.8258;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,42:44:99:1767,120,0	0/0:9,0:9:27.09:0,27,506	0/0:21,0:21:58.08:0,58,1026	0/0:19,0:19:17.53:0,18,825	0/0:29,0:29:78.27:0,78,1460	0/0:27,0:27:78.27:0,78,1461	0/0:17,0:17:42.13:0,42,749	0/0:21,0:21:60.20:0,60,1096	0/0:20,0:20:60.19:0,60,1092	0/0:36,0:36:99:0,99,1849	0/0:30,0:30:90.31:0,90,1685	0/0:20,0:20:57.18:0,57,1029	0/0:10,0:10:30.10:0,30,553	0/0:17,0:17:51.17:0,51,955	0/0:23,0:23:69.24:0,69,1292	0/0:19,0:19:54.19:0,54,1011	1/1:1,31:32:90.30:1325,90,0	0/0:23,0:23:66.23:0,66,1236	0/0:16,0:16:48.16:0,48,899	0/0:35,0:35:99:0,102,1911	0/0:11,0:11:33.11:0,33,618	0/0:22,0:22:66.21:0,66,1196	0/0:28,0:28:81.28:0,81,1502	0/0:16,0:16:48.16:0,48,899	0/0:19,0:19:57.20:0,57,1068	0/0:25,0:25:75.26:0,75,1401	0/0:19,0:19:57.18:0,57,1035	0/0:5,0:5:12.04:0,12,225
chr10	1742313	.	CATTT	C	922.37	PASS	AB=1.000;AC=11;AF=0.239;AN=46;BaseQRankSum=5.184;DP=348;FS=0.000;HRun=0;HaplotypeScore=56.5047;InbreedingCoeff=0.5526;MQ=72.90;MQ0=1;MQRankSum=0.997;QD=7.82;ReadPosRankSum=-2.198;VQSLOD=1.2425;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:19,0:19:17.98:18,0,55	./.	./.	./.	0/0:17,0:17:15.05:0,15,293	0/0:9,0:9:15.05:0,15,270	0/0:4,0:4:3.01:0,3,53	1/1:27,12:36:29.58:394,30,0	1/1:4,6:10:9.03:143,9,0	0/0:16,0:16:6.02:0,6,129	0/0:14,0:14:12.03:0,12,202	0/0:5,0:5:3.01:0,3,50	0/0:5,0:5:3.01:0,3,45	0/0:11,0:11:6.02:0,6,125	0/0:15,0:15:9.03:0,9,215	0/0:8,0:8:12.04:0,12,265	0/0:18,0:18:10.64:0,11,94	0/0:14,0:14:30.10:0,30,650	0/0:15,0:15:10.28:0,10,180	0/0:13,0:13:6.02:0,6,124	./.	0/0:9,0:9:3.01:0,3,70	0/0:13,0:13:9.03:0,9,142	./.	0/0:14,0:14:6.01:0,6,78	1/1:12,4:16:12.04:181,12,0	1/1:15,3:18:3.01:48,3,0	1/1:4,12:16:18.06:287,18,0
chr10	1742330	.	ATTTATTTATTTATTTAT	A	292.17	PASS	AB=1.000;AC=3;AF=0.065;AN=46;BaseQRankSum=2.825;DP=218;FS=9.012;HRun=0;HaplotypeScore=97.6698;InbreedingCoeff=0.1538;MQ=54.65;MQ0=3;MQRankSum=-1.199;QD=8.35;ReadPosRankSum=-0.044;VQSLOD=1.0666;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,12:17:6.02:215,6,0	./.	./.	./.	0/0:9,0:9:21.07:0,21,1015	0/0:8,0:8:21.05:0,21,711	0/0:2,0:2:3.01:0,3,89	0/0:39,0:35:42.45:0,42,1114	0/0:7,0:7:9.03:0,9,432	0/0:7,0:7:9.03:0,9,502	0/0:9,0:9:12.04:0,12,524	0/0:2,0:2:3.01:0,3,42	0/0:2,0:2:3.01:0,3,185	0/0:5,0:5:6.02:0,6,285	0/0:6,0:6:9.03:0,9,729	0/0:5,0:5:12.04:0,12,799	0/1:18,0:18:99:168,0,390	0/0:14,0:14:36.12:0,36,2146	0/0:10,0:9:13.33:0,13,528	0/0:6,0:6:6.02:0,6,284	./.	0/0:2,0:2:3.01:0,3,243	0/0:8,0:8:9.03:0,9,230	./.	0/0:7,0:7:3.01:0,3,42	0/0:10,0:10:6.11:0,6,309	0/0:7,0:7:2.90:0,3,144	0/0:15,0:15:18.06:0,18,864
chr10	1742346	.	AT	A	187.31	PASS	AB=0.741;AC=3;AF=0.065;AN=46;BaseQRankSum=4.964;DP=203;FS=5.103;HRun=4;HaplotypeScore=26.7312;InbreedingCoeff=0.2050;MQ=53.85;MQ0=4;MQRankSum=-1.345;QD=5.51;ReadPosRankSum=0.487;VQSLOD=-0.3195;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:14:5.69:47,6,0	./.	./.	./.	0/0:11,0:11:30.10:0,30,406	0/0:9,0:9:27.07:0,27,353	0/0:1,0:1:3.01:0,3,42	0/0:46,0:43:93:0,93,1220	0/0:7,0:7:6.75:0,7,51	0/0:3,0:3:9.03:0,9,124	0/0:5,0:5:15.05:0,15,206	0/0:1,0:1:3.01:0,3,41	0/0:2,0:2:6.02:0,6,82	0/0:2,0:2:6.02:0,6,84	0/0:4,0:4:12.03:0,12,154	0/0:5,0:5:15.05:0,15,208	0/1:13,7:20:99:232,0,279	0/0:19,0:19:51.15:0,51,681	0/0:7,0:6:18.05:0,18,228	0/0:2,0:2:6.02:0,6,83	./.	0/0:2,0:2:6.02:0,6,83	0/0:4,0:4:9.03:0,9,124	./.	0/0:3,0:3:9.03:0,9,123	0/0:6,0:6:1.93:0,2,76	0/0:9,0:9:19.15:0,19,234	0/0:17,0:17:22.52:0,23,219
chr10	1742992	.	T	TTG	15549.32	PASS	AC=52;AF=0.963;AN=54;BaseQRankSum=0.395;DP=363;FS=5.011;HRun=0;HaplotypeScore=204.8376;InbreedingCoeff=0.5242;MQ=32.97;MQ0=1;MQRankSum=-1.732;QD=43.07;ReadPosRankSum=1.290;VQSLOD=4.6779;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,9:12:12.04:217,12,0	1/1:0,4:3:9.03:160,9,0	./.	0/0:2,0:1:2.84:0,3,14	1/1:0,29:28:72.24:1254,72,0	1/1:3,18:20:54.18:961,54,0	1/1:1,10:8:21.07:358,21,0	1/1:2,6:6:15.01:218,15,0	1/1:0,13:13:36.12:636,36,0	1/1:0,17:16:42.14:765,42,0	1/1:0,21:20:54.14:890,54,0	1/1:1,8:9:24.08:437,24,0	1/1:4,13:17:48.14:801,48,0	1/1:3,11:12:27.09:454,27,0	1/1:2,15:17:48.16:840,48,0	1/1:0,12:12:36.12:658,36,0	1/1:3,8:10:30.09:512,30,0	1/1:0,12:12:30.10:570,30,0	1/1:0,6:6:12.04:222,12,0	1/1:3,14:16:45.14:771,45,0	1/1:2,4:5:9.03:165,9,0	1/1:3,24:26:69.18:1128,69,0	1/1:2,11:13:33.11:598,33,0	1/1:2,8:10:18.06:318,18,0	1/1:1,14:15:42.14:735,42,0	1/1:1,12:13:39.13:688,39,0	1/1:0,24:23:63.22:1143,63,0	1/1:0,1:1:3.01:50,3,0
chr10	1743001	.	TC	T	7866.24	PASS	AC=50;AF=1.000;AN=50;DP=322;FS=0.000;HRun=3;HaplotypeScore=229.2288;InbreedingCoeff=-0.0153;MQ=27.64;MQ0=1;QD=24.51;VQSLOD=3.6835;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,7:9:12.03:133,12,0	1/1:0,4:3:9.02:99,9,0	./.	./.	1/1:0,28:27:57.08:604,57,0	1/1:0,18:17:45.12:486,45,0	1/1:0,10:8:21.06:234,21,0	1/1:0,6:4:9.02:92,9,0	1/1:1,12:13:30.08:329,30,0	1/1:0,18:16:42.03:393,42,0	1/1:0,20:19:51.13:558,51,0	1/1:1,8:9:24.06:261,24,0	1/1:0,14:14:42.11:451,42,0	1/1:1,10:9:24.06:261,24,0	1/1:0,15:15:42.11:461,42,0	1/1:0,12:12:36.09:390,36,0	1/1:0,8:7:18.05:196,18,0	1/1:0,9:9:27.05:269,27,0	1/1:3,3:6:6.01:60,6,0	1/1:3,12:14:33.05:345,33,0	1/1:0,4:3:6.02:66,6,0	1/1:5,20:24:47.97:500,48,0	1/1:1,10:11:24.07:268,24,0	1/1:0,8:8:15.04:169,15,0	1/1:1,13:14:30.08:326,30,0	1/1:1,11:12:33.08:348,33,0	1/1:2,20:21:54.12:568,54,0	./.
chr10	1743008	.	GA	G	10126.74	PASS	AC=54;AF=0.964;AN=56;BaseQRankSum=1.621;DP=391;FS=0.000;HRun=3;HaplotypeScore=236.8281;InbreedingCoeff=0.2684;MQ=27.78;MQ0=1;MQRankSum=1.486;QD=25.97;ReadPosRankSum=-0.598;VQSLOD=3.5910;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,5:8:11.98:130,12,0	1/1:1,4:4:9.03:111,9,0	1/1:0,1:1:3.01:34,3,0	0/0:1,0:1:0:0,0,0	1/1:3,30:32:48.15:591,48,0	1/1:0,20:19:45.14:554,45,0	1/1:0,13:11:27.03:315,27,0	1/1:3,7:8:12.04:148,12,0	1/1:1,18:19:51.16:627,51,0	1/1:4,21:23:60.11:705,60,0	1/1:1,21:21:51.16:627,51,0	1/1:1,9:10:24.02:278,24,0	1/1:3,13:16:39.12:477,39,0	1/1:0,16:14:36.11:443,36,0	1/1:0,18:18:51.16:628,51,0	1/1:0,15:15:45.14:555,45,0	1/1:1,10:10:27.06:318,27,0	1/1:0,13:13:36.07:427,36,0	1/1:1,5:5:9.03:111,9,0	1/1:1,17:17:36.06:424,36,0	1/1:2,3:4:6.02:74,6,0	1/1:4,20:23:42.13:516,42,0	1/1:0,14:14:18.06:222,18,0	1/1:0,13:13:20.50:258,21,0	1/1:3,12:15:27.08:333,27,0	1/1:2,16:18:48.15:587,48,0	1/1:4,17:20:54:597,54,0	1/1:0,1:1:3.01:37,3,0
chr10	1746396	.	TG	T	2030.92	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.767;DP=775;FS=5.645;HRun=3;HaplotypeScore=73.2999;InbreedingCoeff=0.9999;MQ=86.83;MQ0=0;MQRankSum=-3.946;QD=30.31;ReadPosRankSum=0.995;VQSLOD=3.3183;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,37:40:96.30:1186,96,0	0/0:14,0:14:42.14:0,42,602	0/0:29,0:29:78.26:0,78,1090	0/0:26,0:26:73.41:0,73,962	0/0:36,0:36:99:0,102,1466	0/0:34,0:34:96.31:0,96,1357	0/0:22,0:22:66.22:0,66,950	0/0:36,0:36:99:0,105,1438	0/0:30,0:30:90.30:0,90,1291	0/0:41,0:41:99:0,117,1678	0/0:24,0:24:72.24:0,72,1032	0/0:23,0:23:69.21:0,69,974	0/0:34,0:34:99:0,99,1400	0/0:36,0:36:99:0,108,1529	0/0:25,0:25:72.22:0,72,1000	0/0:22,0:22:63.21:0,63,903	1/1:0,27:27:78.25:967,78,0	0/0:18,0:18:45.13:0,45,629	0/0:22,0:22:66.21:0,66,932	0/0:31,0:31:90.30:0,90,1289	0/0:39,0:39:99:0,114,1596	0/0:23,0:23:66.20:0,66,915	0/0:26,0:26:72.24:0,72,1033	0/0:35,0:35:99:0,105,1483	0/0:27,0:27:75.22:0,75,1027	0/0:23,0:23:69.22:0,69,975	0/0:19,0:19:51.17:0,51,727	0/0:13,0:13:39.13:0,39,562
chr10	1746649	.	TA	T	1474.51	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.199;DP=739;FS=0.000;HRun=2;HaplotypeScore=68.6036;InbreedingCoeff=0.9976;MQ=75.23;MQ0=0;MQRankSum=-2.397;QD=30.72;ReadPosRankSum=1.984;VQSLOD=3.2431;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,21:22:54.18:701,54,0	0/0:16,0:16:48.15:0,48,699	0/0:25,0:25:72.18:0,72,1054	0/0:14,0:14:39.10:0,39,560	0/0:34,0:34:99:0,99,1462	0/0:38,0:38:99:0,108,1596	0/0:21,0:21:63.20:0,63,921	0/0:35,0:35:99:0,102,1443	0/0:23,0:23:69.23:0,69,1032	0/0:43,0:43:99:0,129,1916	0/0:34,0:34:99:0,99,1425	0/0:21,0:21:63.21:0,63,943	0/0:32,0:32:96.29:0,96,1374	0/0:23,0:23:66.18:0,66,909	0/0:33,0:33:96.30:0,96,1401	0/0:21,0:21:60.20:0,60,899	1/1:2,24:26:69.22:896,69,0	0/0:10,0:10:30.10:0,30,449	0/0:30,0:30:87.26:0,87,1261	0/0:35,0:35:99:0,99,1465	0/0:19,0:19:57.19:0,57,854	0/0:39,0:39:99:0,111,1623	0/0:38,0:38:99:0,108,1580	0/0:15,0:15:45.15:0,45,672	0/0:23,0:23:66.22:0,66,989	0/0:29,0:29:87.29:0,87,1286	0/0:33,0:33:93.27:0,93,1330	0/0:7,0:7:21.07:0,21,315
chr10	1747064	.	A	AAAC	1382.11	PASS	AB=1.000;AC=9;AF=0.173;AN=52;BaseQRankSum=-4.875;DP=605;FS=13.941;HRun=0;HaplotypeScore=94.4460;InbreedingCoeff=0.7177;MQ=65.07;MQ0=5;MQRankSum=-0.625;QD=11.06;ReadPosRankSum=-1.715;VQSLOD=1.8930;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:2.97:0,3,21	0/0:5,0:6:8.97:0,9,99	./.	./.	0/0:10,0:10:3.88:0,4,27	0/0:22,0:22:39.05:0,39,436	0/1:13,0:13:11.97:12,0,93	1/1:31,0:31:8.93:63,9,0	0/0:23,0:24:36.10:0,36,451	0/0:31,0:31:33.09:0,33,407	0/0:20,0:20:27.05:0,27,311	0/0:17,0:17:33.10:0,33,417	0/0:26,1:27:2.93:0,3,635	0/0:14,0:13:24.08:0,24,313	0/0:25,0:25:33.09:0,33,405	0/0:20,0:20:21.05:0,21,260	0/0:10,0:27:37.23:0,37,247	0/0:17,0:17:12.16:0,12,352	0/0:32,0:29:18:0,18,191	0/0:20,0:20:27.04:0,27,295	0/0:10,0:10:15.03:0,15,180	0/0:18,0:18:24.08:0,24,309	0/0:17,0:17:23.91:0,24,246	0/0:33,0:33:62.99:0,63,728	0/0:20,0:20:18.01:0,18,189	1/1:8,10:19:35.64:490,36,0	1/1:21,15:38:33.11:629,33,0	1/1:17,7:24:18.06:343,18,0
chr10	1747096	.	ACAACAACAACAACAG	A	183.55	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.690;DP=583;FS=3.731;HRun=0;HaplotypeScore=219.4417;InbreedingCoeff=0.9607;MQ=56.03;MQ0=12;MQRankSum=-3.801;QD=7.65;ReadPosRankSum=-0.967;VQSLOD=2.6481;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:1,23:24:12:269,12,0	0/0:9,0:9:27.06:0,27,918	0/0:20,0:12:36.03:0,36,481	0/0:18,0:13:22.23:0,22,377	0/0:8,0:8:24.03:0,24,742	0/0:21,0:21:60.19:0,60,3088	0/0:10,0:10:27.08:0,27,1138	0/0:32,0:32:93.10:0,93,1678	0/0:24,0:24:63.20:0,63,3386	0/0:29,0:28:78.20:0,78,3056	0/0:18,0:18:48:0,48,2100	0/0:25,0:25:69.07:0,69,3210	0/0:26,0:26:75.23:0,75,4495	0/0:19,0:18:54.15:0,54,2547	0/0:21,0:21:60.16:0,60,2989	0/0:12,0:12:33.06:0,33,1666	0/0:27,0:27:69.20:0,69,2561	0/0:19,0:19:57.05:0,57,2617	0/0:25,0:22:65.58:0,66,1825	0/0:16,0:15:45.13:0,45,2168	0/0:17,0:16:45.13:0,45,1930	0/0:15,0:14:42.07:0,42,1951	0/0:18,0:18:51.96:0,52,1961	0/0:38,0:38:99:0,114,5145	0/0:15,0:15:45:0,45,1507	0/0:22,0:22:65.54:0,66,2673	0/0:35,0:35:86.79:0,87,3104	0/0:20,0:19:50.95:0,51,1913
chr10	1747300	.	C	CT	432.68	PASS	AB=0.964;AC=6;AF=0.107;AN=56;BaseQRankSum=-2.562;DP=333;FS=8.622;HRun=11;HaplotypeScore=39.4776;InbreedingCoeff=0.5142;MQ=62.68;MQ0=4;MQRankSum=1.645;QD=7.21;ReadPosRankSum=0.401;VQSLOD=0.6144;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:1,0:6:10.18:0,10,29	0/0:7,0:7:11.95:0,12,93	0/0:10,0:5:2.98:0,3,23	0/0:6,0:3:2.96:0,3,22	0/0:15,0:15:32.85:0,33,255	0/0:12,0:12:26.85:0,27,209	0/0:10,0:9:11.95:0,12,93	0/0:22,0:21:37.63:0,38,274	0/0:10,0:10:17.91:0,18,139	1/1:5,12:17:33.07:335,33,0	1/1:1,8:9:21.04:213,21,0	0/0:10,0:10:17.87:0,18,139	0/0:11,0:11:17.92:0,18,139	0/0:11,0:11:23.89:0,24,186	0/0:13,0:13:15.81:0,16,118	0/0:4,0:5:11:0,11,75	0/0:10,0:10:8.93:0,9,70	0/0:14,0:14:32.86:0,33,255	0/1:21,0:20:5.30:5,0,140	0/0:15,0:16:34.88:0,35,261	0/0:12,0:12:23.87:0,24,185	0/0:9,0:9:20.92:0,21,163	0/1:12,1:13:6.57:7,0,139	0/0:4,0:4:5.97:0,6,46	0/0:19,0:19:44.75:0,45,345	0/0:13,0:13:25.69:0,26,203	0/0:12,0:12:32.87:0,33,255	0/0:14,0:14:32.87:0,33,256
chr10	1747320	.	T	TTC	111.02	PASS	AB=0.667;AC=1;AF=0.018;AN=56;BaseQRankSum=3.658;DP=312;FS=0.000;HRun=0;HaplotypeScore=37.9511;InbreedingCoeff=-0.0412;MQ=48.55;MQ0=28;MQRankSum=-3.359;QD=9.25;ReadPosRankSum=0.281;VQSLOD=2.9157;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:6,6:7:30.79:185,0,31	0/0:6,0:5:15.05:0,15,225	0/0:6,0:1:3.01:0,3,45	0/0:5,0:1:3.01:0,3,45	0/0:14,0:14:35.83:0,36,530	0/0:12,0:12:33.07:0,33,473	0/0:6,0:5:6.02:0,6,92	0/0:16,0:10:12.07:0,12,287	0/0:11,0:9:24.03:0,24,320	0/0:19,0:17:42.13:0,42,608	0/0:12,0:12:36.12:0,36,524	0/0:9,0:9:27.09:0,27,412	0/0:7,0:7:18.06:0,18,275	0/0:10,0:9:24.08:0,24,359	0/0:9,0:9:18.06:0,18,275	0/0:4,0:4:12.04:0,12,181	0/0:12,0:9:11.96:0,12,114	0/0:17,0:11:30.10:0,30,459	0/0:16,0:14:42.11:0,42,617	0/0:16,0:12:36.11:0,36,531	0/0:16,0:13:39.13:0,39,579	0/0:7,0:7:18.05:0,18,252	0/0:11,0:10:26.97:0,27,413	0/0:8,0:6:9.03:0,9,132	0/0:16,0:15:39.13:0,39,596	0/0:9,0:8:21.07:0,21,322	0/0:12,0:12:34.91:0,35,468	0/0:14,0:12:29.93:0,30,401
chr10	1749136	.	AT	A	456.47	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=6.343;DP=532;FS=1.826;HRun=7;HaplotypeScore=48.8832;InbreedingCoeff=0.7284;MQ=74.52;MQ0=0;MQRankSum=-0.276;QD=14.26;ReadPosRankSum=-0.803;VQSLOD=2.8247;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,19:21:54.12:551,54,0	0/0:10,0:10:30.09:0,30,368	0/1:11,0:10:1.64:2,0,264	0/0:9,1:10:10.02:0,10,168	0/0:33,0:33:93.28:0,93,1155	0/0:25,0:25:69.20:0,69,844	0/0:19,0:19:51.16:0,51,631	0/0:32,1:33:53.63:0,54,956	0/0:16,0:16:45.14:0,45,565	0/0:24,0:24:69.22:0,69,859	0/0:21,0:21:60.19:0,60,755	0/0:25,0:25:69.21:0,69,854	0/0:17,0:17:45.12:0,45,550	0/0:15,0:15:45.14:0,45,564	0/0:22,0:22:66.21:0,66,829	0/0:23,0:23:60.18:0,60,742	0/0:14,0:14:39.12:0,39,490	0/0:7,0:7:21.02:0,21,246	0/0:16,0:16:39.12:0,39,490	0/0:27,0:27:72.23:0,72,900	0/0:12,0:12:36.12:0,36,453	0/0:13,0:13:39.11:0,39,467	0/0:16,0:16:45.14:0,45,566	0/0:16,0:16:48.15:0,48,604	0/0:25,0:24:66.17:0,66,783	0/0:26,0:27:72.08:0,72,861	0/0:26,0:26:69.19:0,69,839	0/0:8,0:8:24.08:0,24,302
chr10	1749282	.	A	AT	462.11	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.687;DP=474;FS=5.186;HRun=0;HaplotypeScore=47.3741;InbreedingCoeff=0.8577;MQ=67.96;MQ0=0;MQRankSum=-1.591;QD=30.81;ReadPosRankSum=0.048;VQSLOD=3.0289;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,14:15:42.61:557,43,0	0/0:9,0:9:27.07:0,27,360	0/0:7,0:7:21.04:0,21,273	0/0:5,0:5:3.98:0,4,112	0/0:25,0:25:75.25:0,75,1048	0/0:25,0:25:75.25:0,75,1048	0/0:13,0:13:39.10:0,39,510	0/0:23,0:23:69.22:0,69,950	0/0:18,0:18:54.18:0,54,755	0/0:16,0:16:48.16:0,48,668	0/0:29,0:29:84.27:0,84,1157	0/0:14,0:14:42.14:0,42,587	0/0:17,0:17:51.15:0,51,695	0/0:10,0:10:27.09:0,27,378	0/0:13,0:13:39.13:0,39,545	0/0:16,0:16:45.15:0,45,628	0/0:25,0:25:40.56:0,41,359	0/0:20,0:20:60.16:0,60,816	0/0:14,0:14:42.13:0,42,567	0/0:34,0:34:96.32:0,96,1342	0/0:6,0:6:18.02:0,18,229	0/0:14,0:14:42.11:0,42,553	0/0:21,0:21:60.20:0,60,834	0/0:12,0:12:36.10:0,36,485	0/0:16,0:16:45.15:0,45,629	0/0:24,0:24:72.23:0,72,992	0/0:23,0:23:69.23:0,69,962	0/0:10,0:10:27.09:0,27,378
chr10	1750174	.	TA	T	673.28	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=8.213;DP=573;FS=17.924;HRun=7;HaplotypeScore=58.2288;InbreedingCoeff=0.9601;MQ=62.97;MQ0=0;MQRankSum=-0.532;QD=23.22;ReadPosRankSum=0.838;VQSLOD=2.1262;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,26:29:76.41:768,76,0	0/0:7,0:7:18.06:0,18,226	0/0:16,0:16:33.99:0,34,403	0/0:8,0:8:14.64:0,15,179	0/0:28,0:28:81.26:0,81,1019	0/0:18,0:18:54.17:0,54,679	0/0:19,0:19:57.18:0,57,717	0/0:34,0:34:87.27:0,87,1084	0/0:33,0:33:87.26:0,87,1081	0/0:15,0:15:36.11:0,36,442	0/0:21,0:21:57.17:0,57,706	0/0:14,0:14:42.13:0,42,528	0/0:20,0:20:57.15:0,57,682	0/0:20,0:20:57.17:0,57,702	0/0:27,0:27:78.20:0,78,940	0/0:22,0:22:60.18:0,60,742	0/0:17,0:18:44.12:0,44,580	0/0:29,0:29:81.26:0,81,1014	0/0:14,0:14:36.11:0,36,445	0/0:32,0:32:84.24:0,84,1021	0/0:26,0:26:78.23:0,78,967	0/0:21,0:21:63.19:0,63,781	0/0:19,0:19:54.16:0,54,666	0/0:17,0:17:51.16:0,51,641	0/0:16,0:16:45.14:0,45,566	0/0:16,0:16:45.12:0,45,551	0/0:28,0:28:78.24:0,78,969	0/0:6,0:5:15.05:0,15,189
chr10	1750736	.	GCC	G	1551.67	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=8.463;DP=675;FS=3.144;HRun=2;HaplotypeScore=85.6726;InbreedingCoeff=0.9993;MQ=66.03;MQ0=2;MQRankSum=0.951;QD=40.83;ReadPosRankSum=0.672;VQSLOD=3.7528;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,37:36:99:1647,102,0	0/0:14,0:14:42.14:0,42,854	0/0:22,0:21:57.17:0,57,1109	0/0:15,0:15:32.91:0,33,653	0/0:24,0:24:72.25:0,72,1463	0/0:28,0:28:84.29:0,84,1706	0/0:26,0:26:78.27:0,78,1557	0/0:36,0:36:99:0,108,2143	0/0:28,0:28:84.29:0,84,1687	0/0:26,0:26:78.24:0,78,1524	0/0:16,0:16:48.16:0,48,947	0/0:26,0:26:78.27:0,78,1584	0/0:21,0:21:63.22:0,63,1280	0/0:23,0:23:66.23:0,66,1341	0/0:33,0:33:99:0,99,1998	0/0:26,0:26:78.27:0,78,1585	0/0:27,0:27:81.23:0,81,1583	0/0:12,0:12:36.08:0,36,690	0/0:21,0:21:63.19:0,63,1182	0/0:24,0:24:72.25:0,72,1453	0/0:28,0:28:81.28:0,81,1632	0/0:18,0:18:54.19:0,54,1087	0/0:26,0:26:78.23:0,78,1472	0/0:24,0:24:72.22:0,72,1390	0/0:20,0:20:57.20:0,57,1150	0/0:19,0:19:57.20:0,57,1159	0/0:43,0:42:99:0,129,2570	0/0:11,0:11:33.11:0,33,671
chr10	1751518	.	AT	A	670.24	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.452;DP=650;FS=2.668;HRun=7;HaplotypeScore=63.7331;InbreedingCoeff=0.9973;MQ=73.77;MQ0=0;MQRankSum=-2.309;QD=25.78;ReadPosRankSum=1.873;VQSLOD=4.4445;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:87.21:0,87,1050	0/0:17,0:17:51.15:0,51,629	0/0:19,0:19:37:0,37,445	0/0:13,0:13:35.81:0,36,402	0/0:25,0:25:69.21:0,69,857	0/0:29,0:29:78.24:0,78,968	0/0:22,0:22:63.19:0,63,779	0/0:25,0:25:63.19:0,63,771	0/0:36,0:36:99:0,105,1284	0/0:26,0:26:66.21:0,66,830	0/0:37,0:37:99:0,105,1304	0/0:14,0:14:36.12:0,36,453	0/0:17,0:17:45.13:0,45,551	0/0:28,0:28:81.24:0,81,995	0/0:24,0:24:66.19:0,66,805	0/0:17,0:17:48.15:0,48,593	1/1:1,25:26:75.17:765,75,0	0/0:13,0:13:33.11:0,33,415	0/0:18,0:18:54.17:0,54,679	0/0:27,0:27:78.25:0,78,980	0/0:16,0:16:48.15:0,48,603	0/0:21,0:21:63.20:0,63,792	0/0:26,0:26:66.21:0,66,830	0/0:14,0:14:42.10:0,42,501	0/0:30,0:30:87.26:0,87,1079	0/0:21,0:21:54.17:0,54,679	0/0:50,0:49:99:0,135,1673	0/0:8,0:8:24.06:0,24,289
chr10	1751969	.	A	AT	176.64	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.206;DP=486;FS=0.000;HRun=4;HaplotypeScore=49.2022;InbreedingCoeff=0.9526;MQ=76.53;MQ0=0;MQRankSum=-2.407;QD=16.06;ReadPosRankSum=0.383;VQSLOD=2.5011;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,6:11:21.05:269,21,0	0/0:7,0:7:21.06:0,21,238	0/0:10,0:10:30.09:0,30,340	0/0:12,0:12:23.61:0,24,267	0/0:23,0:23:69.20:0,69,783	0/0:20,0:20:51.14:0,51,579	0/0:7,0:7:21.06:0,21,238	0/0:40,0:40:99:0,111,1233	0/0:20,0:20:57.16:0,57,646	0/0:22,0:22:57.16:0,57,646	0/0:31,0:31:87.24:0,87,978	0/0:13,0:13:36.10:0,36,408	0/0:17,0:17:42.12:0,42,476	0/0:9,0:9:24.07:0,24,272	0/0:23,0:23:69.20:0,69,783	0/0:13,0:13:39.11:0,39,442	0/0:15,0:15:39.11:0,39,442	0/0:11,0:12:27.08:0,27,306	0/0:21,0:21:57.15:0,57,638	0/0:29,0:29:72.19:0,72,807	0/0:4,0:4:12.03:0,12,136	0/0:14,0:14:33.09:0,33,374	0/0:25,0:25:69.19:0,69,782	0/0:13,0:13:36.10:0,36,408	0/0:24,0:24:69.17:0,69,765	0/0:15,0:15:39.11:0,39,443	0/0:21,0:21:60.15:0,60,670	0/0:15,0:15:45.13:0,45,510
chr10	1752006	.	T	TA	590.47	PASS	AC=4;AF=0.074;AN=54;BaseQRankSum=-0.223;DP=389;FS=6.633;HRun=2;HaplotypeScore=35.6500;InbreedingCoeff=0.8841;MQ=58.53;MQ0=1;MQRankSum=-0.896;QD=21.87;ReadPosRankSum=-0.469;VQSLOD=2.9283;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,9:12:20.96:249,21,0	0/0:6,0:6:18.05:0,18,212	0/0:6,0:3:9.02:0,9,100	./.	0/0:24,0:24:72.20:0,72,865	0/0:13,0:13:39.09:0,39,447	0/0:3,0:3:9.03:0,9,111	0/0:25,0:24:69.12:0,69,784	0/0:10,0:10:27.07:0,27,321	0/0:18,0:18:48.14:0,48,574	0/0:28,0:28:81.24:0,81,986	0/0:15,0:15:44.98:0,45,450	0/0:10,0:10:30.09:0,30,359	0/0:9,0:8:24.08:0,24,296	0/0:17,0:17:45.11:0,45,522	0/0:11,0:11:33.10:0,33,400	1/1:2,13:15:33.11:461,33,0	0/0:7,0:7:18.04:0,18,208	0/0:18,0:18:54.14:0,54,651	0/0:29,0:29:84.11:0,84,963	0/0:2,0:2:6.01:0,6,64	0/0:11,0:11:30.09:0,30,370	0/0:22,0:22:66.18:0,66,788	0/0:11,0:11:30.07:0,30,346	0/0:24,0:24:69.21:0,69,842	0/0:12,0:12:36.11:0,36,445	0/0:19,0:19:51.14:0,51,614	0/0:9,0:9:27.07:0,27,312
chr10	1752927	.	TG	T	535.18	PASS	AB=0.558;AC=1;AF=0.020;AN=50;BaseQRankSum=5.147;DP=635;FS=0.907;HRun=3;HaplotypeScore=64.8447;InbreedingCoeff=-0.0161;MQ=54.76;MQ0=15;MQRankSum=1.521;QD=18.45;ReadPosRankSum=1.956;VQSLOD=3.3720;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	0/0:6,0:6:18.06:0,18,259	./.	./.	0/0:29,0:29:72.20:0,72,981	0/0:34,0:34:99:0,99,1375	0/0:20,0:20:48.16:0,48,690	0/0:34,0:18:45.05:0,45,566	0/0:28,0:28:81.27:0,81,1159	0/0:37,0:35:99:0,105,1512	0/0:20,0:19:54.18:0,54,776	0/0:19,0:19:51.17:0,51,734	0/0:27,0:27:72.24:0,72,1035	0/0:11,0:11:33.11:0,33,475	0/0:27,0:27:81.27:0,81,1166	0/0:24,0:24:69.23:0,69,993	0/1:6,23:28:26.20:609,0,26	0/0:23,0:23:66.22:0,66,946	0/0:23,0:15:42.14:0,42,605	0/0:44,0:42:99:0,126,1813	0/0:13,0:10:27.07:0,27,368	0/0:26,0:26:60.20:0,60,863	0/0:40,0:39:99:0,108,1516	0/0:23,0:23:60.08:0,60,796	0/0:17,0:17:48.16:0,48,691	0/0:34,0:32:96.32:0,96,1382	0/0:33,0:33:93.31:0,93,1338	0/0:12,0:12:33.11:0,33,475
chr10	1754454	.	T	TG	493.78	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.097;DP=535;FS=26.780;HRun=0;HaplotypeScore=53.3144;InbreedingCoeff=0.9535;MQ=83.97;MQ0=0;MQRankSum=-5.831;QD=32.92;ReadPosRankSum=-1.269;VQSLOD=1.7068;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,15:15:42.14:589,42,0	0/0:9,0:9:27.04:0,27,341	0/0:17,1:18:51.16:0,51,698	0/0:15,0:15:40.68:0,41,540	0/0:27,0:27:75.22:0,75,987	0/0:24,0:23:72.24:0,72,1003	0/0:17,0:17:48.10:0,48,601	0/0:29,0:29:81.24:0,81,1076	0/0:20,0:20:60.20:0,60,839	0/0:24,0:24:69.22:0,69,950	0/0:20,0:20:60.19:0,60,824	0/0:23,0:23:66.21:0,66,893	0/0:22,0:22:66.19:0,66,875	0/0:18,0:18:54.18:0,54,755	0/0:24,0:24:72.22:0,72,962	0/0:19,0:19:57.18:0,57,783	0/0:15,0:15:45.11:0,45,593	0/0:4,0:4:12.04:0,12,167	0/0:15,0:15:45.12:0,45,596	0/0:22,0:22:66.19:0,66,875	0/0:9,0:9:27.08:0,27,362	0/0:20,0:20:57.19:0,57,797	0/0:19,0:19:57.15:0,57,775	0/0:13,0:13:36.11:0,36,488	0/0:25,0:25:75.24:0,75,1030	0/0:28,0:28:84.28:0,84,1175	0/0:36,0:36:99:0,105,1420	0/0:5,0:5:15.03:0,15,179
chr10	1754647	.	G	GACACACAC	803.18	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=2.750;DP=607;FS=2.536;HRun=0;HaplotypeScore=148.6226;InbreedingCoeff=0.9781;MQ=65.05;MQ0=2;MQRankSum=-5.333;QD=16.06;ReadPosRankSum=0.271;VQSLOD=2.9585;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,24:35:18.06:684,18,0	0/0:6,0:6:15.05:0,15,394	0/0:20,0:13:38.07:0,38,540	0/0:35,0:22:29.85:0,30,458	0/0:20,0:21:39.13:0,39,951	0/0:27,0:27:32.40:0,32,1237	0/0:19,0:19:39.13:0,39,871	0/0:29,0:29:72.24:0,72,1388	0/0:27,0:27:63.17:0,63,1316	0/0:28,0:28:66.20:0,66,1533	0/0:22,0:22:51.14:0,51,1079	0/0:16,0:16:42.13:0,42,810	0/0:17,0:17:39.13:0,39,995	0/0:21,0:21:51.17:0,51,1119	0/0:13,0:12:30.10:0,30,731	0/0:17,0:18:51.15:0,51,1065	1/1:14,0:14:14.95:235,15,0	0/0:15,0:15:36.12:0,36,752	0/0:25,0:24:38.99:0,39,738	0/0:21,0:21:53.96:0,54,1118	0/0:35,0:34:72.19:0,72,1490	0/0:23,0:23:57.18:0,57,1271	0/0:18,0:18:45.11:0,45,875	0/0:17,0:17:33.11:0,33,771	0/0:17,0:17:45.13:0,45,904	0/0:21,0:21:57.19:0,57,1300	0/0:34,0:34:83.45:0,83,1776	0/0:12,0:12:33.11:0,33,822
chr10	1754901	.	TGAGAAA	T	1649.78	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=8.089;DP=622;FS=12.045;HRun=0;HaplotypeScore=129.3171;InbreedingCoeff=0.9993;MQ=84.47;MQ0=0;MQRankSum=-8.353;QD=53.22;ReadPosRankSum=-0.945;VQSLOD=3.1458;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,29:31:75.21:1745,75,0	0/0:13,0:13:39.13:0,39,1407	0/0:23,0:23:69.22:0,69,2299	0/0:31,0:31:78.19:0,78,2518	0/0:27,0:27:78.27:0,78,2812	0/0:29,0:29:87.30:0,87,3027	0/0:10,0:10:30.10:0,30,1082	0/0:29,0:28:87.29:0,87,2962	0/0:24,0:24:66.23:0,66,2371	0/0:18,0:18:54.19:0,54,1883	0/0:25,0:25:72.23:0,72,2513	0/0:23,0:23:69.24:0,69,2452	0/0:22,0:22:63.22:0,63,2236	0/0:14,0:14:42.14:0,42,1398	0/0:20,0:20:60.21:0,60,2075	0/0:25,0:25:75.26:0,75,2704	0/0:19,0:19:54.18:0,54,1843	0/0:15,0:15:39.13:0,39,1400	0/0:25,0:25:75.26:0,75,2677	0/0:21,0:21:60.21:0,60,2159	0/0:27,0:27:81.26:0,81,2774	0/0:20,0:20:60.21:0,60,2098	0/0:29,0:29:84.29:0,84,3001	0/0:20,0:20:57.20:0,57,1998	0/0:23,0:23:66.23:0,66,2320	0/0:17,0:17:51.18:0,51,1839	0/0:28,0:28:84.26:0,84,2797	0/0:14,0:14:42.14:0,42,1452
chr10	1755258	.	AG	A	636.88	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.396;DP=645;FS=8.934;HRun=5;HaplotypeScore=68.3213;InbreedingCoeff=0.9997;MQ=88.16;MQ0=0;MQRankSum=-5.144;QD=24.50;ReadPosRankSum=-0.423;VQSLOD=2.2751;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,23:26:66.12:732,66,0	0/0:18,0:18:51.17:0,51,697	0/0:26,0:26:72.21:0,72,905	0/0:27,0:27:63.20:0,63,811	0/0:24,0:24:72.24:0,72,984	0/0:22,0:22:66.21:0,66,887	0/0:23,0:23:63.21:0,63,861	0/0:28,0:28:78.22:0,78,1045	0/0:17,0:17:48.16:0,48,656	0/0:27,0:27:75.24:0,75,1013	0/0:30,0:30:90.29:0,90,1205	0/0:24,0:24:72.22:0,72,954	0/0:22,0:22:66.19:0,66,868	0/0:22,0:22:66.21:0,66,882	0/0:26,0:26:75.24:0,75,1009	0/0:19,0:19:57.12:0,57,726	0/0:22,0:22:60.20:0,60,820	0/0:13,0:13:36.11:0,36,476	0/0:18,0:18:51.09:0,51,629	0/0:22,0:22:63.21:0,63,861	0/0:33,0:33:93.28:0,93,1240	0/0:24,0:24:69.21:0,69,914	0/0:33,0:33:90.30:0,90,1221	0/0:18,0:18:51.17:0,51,697	0/0:23,0:23:69.23:0,69,943	0/0:22,0:22:63.21:0,63,862	0/0:24,0:24:69.23:0,69,944	0/0:12,0:12:36.05:0,36,423
chr10	1755307	.	T	TTGTTAGGG	3337.59	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-1.523;DP=606;FS=0.000;HRun=0;HaplotypeScore=149.3156;InbreedingCoeff=0.8707;MQ=70.73;MQ0=0;MQRankSum=-8.764;QD=101.14;ReadPosRankSum=-0.394;VQSLOD=4.1892;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,22:33:81.28:3338,81,0	0/0:11,0:11:33.11:0,33,898	0/0:7,0:8:5.61:0,6,77	0/0:11,0:11:12.02:0,12,272	0/0:22,0:22:66.23:0,66,1918	0/0:19,0:19:51.18:0,51,1480	0/0:34,0:34:99:0,99,2773	0/0:35,0:35:96.32:0,96,2699	0/0:20,0:20:54.19:0,54,1562	0/0:26,0:26:78.25:0,78,2200	0/0:31,0:31:84.28:0,84,2331	0/0:25,0:25:72.25:0,72,2090	0/0:23,0:23:69.24:0,69,1916	0/0:23,0:23:69.24:0,69,1995	0/0:21,0:21:60.19:0,60,1695	0/0:17,0:17:51.18:0,51,1494	0/0:18,0:18:54.19:0,54,1477	0/0:12,0:12:36.12:0,36,1049	0/0:23,0:23:69.23:0,69,1902	0/0:24,0:24:66.21:0,66,1833	0/0:32,0:32:96.33:0,96,2758	0/0:20,0:20:60.20:0,60,1645	0/0:21,0:21:60.21:0,60,1726	0/0:19,0:19:57.20:0,57,1650	0/0:20,0:20:60.21:0,60,1752	0/0:22,0:22:63.22:0,63,1812	0/0:29,0:29:87.30:0,87,2535	0/0:7,0:7:21.07:0,21,615
chr10	1755496	.	TCC	T	838.88	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.813;DP=504;FS=0.000;HRun=4;HaplotypeScore=66.6196;InbreedingCoeff=0.9705;MQ=94.34;MQ0=0;MQRankSum=-2.838;QD=34.95;ReadPosRankSum=2.089;VQSLOD=2.9737;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,24:24:66.64:934,67,0	0/0:7,0:7:21.07:0,21,393	0/0:17,0:17:42.13:0,42,695	0/0:30,0:30:83.88:0,84,1366	0/0:25,0:25:75.26:0,75,1395	0/0:21,0:21:63.22:0,63,1180	0/0:14,0:14:42.14:0,42,773	0/0:34,0:34:93.26:0,93,1641	0/0:13,0:13:39.10:0,39,686	0/0:27,0:27:75.24:0,75,1369	0/0:18,0:18:54.19:0,54,1011	0/0:11,0:11:33.11:0,33,611	0/0:12,0:12:36.12:0,36,669	0/0:17,0:17:51.17:0,51,941	0/0:16,0:16:48.16:0,48,870	0/0:15,0:15:45.12:0,45,793	0/0:27,0:27:72.23:0,72,1299	0/0:8,0:8:24.06:0,24,402	0/0:21,0:21:60.21:0,60,1108	0/0:26,0:26:78.27:0,78,1449	0/0:30,0:30:87.30:0,87,1606	0/0:14,0:14:39.13:0,39,717	0/0:17,0:17:51.16:0,51,918	0/0:7,0:7:18.06:0,18,337	0/0:15,0:15:45.15:0,45,835	0/0:15,0:15:45.15:0,45,840	0/0:18,0:18:54.19:0,54,1005	0/0:5,0:5:15.05:0,15,281
chr10	1756354	.	T	TA	463.28	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-4.420;DP=488;FS=3.489;HRun=2;HaplotypeScore=47.8166;InbreedingCoeff=0.9905;MQ=84.31;MQ0=0;MQRankSum=-1.276;QD=23.16;ReadPosRankSum=0.788;VQSLOD=3.4987;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,19:20:39.13:558,39,0	0/0:12,0:12:36.07:0,36,418	0/0:12,0:12:26.25:0,26,352	0/0:18,0:18:33.41:0,33,407	0/0:30,0:30:90.22:0,90,1082	0/0:17,0:17:45.13:0,45,544	0/0:8,0:8:24.08:0,24,297	0/0:26,0:26:75.21:0,75,896	0/0:17,0:17:48.15:0,48,594	0/0:30,0:30:84.25:0,84,1020	0/0:22,0:22:66.15:0,66,798	0/0:15,0:15:42.09:0,42,482	0/0:13,0:13:36.10:0,36,432	0/0:17,0:17:51.16:0,51,631	0/0:12,0:12:36.11:0,36,445	0/0:13,0:13:39.10:0,39,462	0/0:9,0:9:27.07:0,27,322	0/0:14,0:14:39.10:0,39,466	0/0:14,0:14:36.10:0,36,425	0/0:30,0:30:90.26:0,90,1089	0/0:17,0:17:51.15:0,51,618	0/0:11,0:11:33.10:0,33,408	0/0:16,0:16:48.15:0,48,594	0/0:24,0:24:72.18:0,72,853	0/0:22,0:22:63.18:0,63,758	0/0:19,0:19:54.16:0,54,658	0/0:23,0:21:66.17:0,66,778	0/0:7,0:7:21.05:0,21,247
chr10	1760968	.	ATGG	A	915.29	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.309;DP=630;FS=7.585;HRun=0;HaplotypeScore=89.6160;InbreedingCoeff=0.9969;MQ=80.68;MQ0=1;MQRankSum=-4.095;QD=38.14;ReadPosRankSum=1.448;VQSLOD=4.1523;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,24:24:60.16:1010,60,0	0/0:8,0:8:24.08:0,24,590	0/0:17,0:17:48.09:0,48,1073	0/0:17,0:17:51.17:0,51,1121	0/0:23,0:23:69.24:0,69,1676	0/0:32,0:32:96.33:0,96,2343	0/0:27,0:27:81.26:0,81,1920	0/0:43,0:43:99:0,126,3078	0/0:20,0:20:60.21:0,60,1457	0/0:27,0:27:81.28:0,81,1990	0/0:24,0:24:69.24:0,69,1676	0/0:19,0:19:57.20:0,57,1405	0/0:28,0:28:84.29:0,84,2070	0/0:21,0:21:60.21:0,60,1477	0/0:29,0:29:84.27:0,84,1996	0/0:27,0:27:81.26:0,81,1867	0/0:28,0:27:81.28:0,81,1997	0/0:10,0:10:27.09:0,27,666	0/0:16,0:16:48.16:0,48,1143	0/0:33,0:32:99:0,99,2429	0/0:13,0:13:39.13:0,39,962	0/0:16,0:16:48.16:0,48,1180	0/0:23,0:23:69.24:0,69,1654	0/0:21,0:21:63.22:0,63,1523	0/0:18,0:18:54.19:0,54,1321	0/0:22,0:22:66.23:0,66,1608	0/0:25,0:25:75.26:0,75,1813	0/0:19,0:19:57.20:0,57,1402
chr10	1763346	.	GA	G	741.25	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.192;DP=623;FS=3.696;HRun=9;HaplotypeScore=60.3503;InbreedingCoeff=0.9866;MQ=84.25;MQ0=0;MQRankSum=-4.033;QD=18.53;ReadPosRankSum=1.064;VQSLOD=3.8643;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,22:25:60.03:549,60,0	0/0:7,0:7:18.05:0,18,208	0/0:21,0:21:33.22:0,33,443	0/0:18,0:19:23.53:0,24,360	0/0:32,1:33:56.75:0,57,881	0/0:20,1:21:35.55:0,36,645	0/0:16,0:16:42.12:0,42,485	0/0:34,0:35:84.06:0,84,934	0/0:27,0:27:69.19:0,69,786	0/0:25,0:26:72.05:0,72,811	0/0:21,0:21:57.14:0,57,639	0/0:15,0:15:39.11:0,39,442	0/0:18,0:18:48.09:0,48,538	0/0:19,0:19:50.94:0,51,567	0/0:25,0:25:69.19:0,69,787	0/0:19,0:19:54.16:0,54,622	1/1:2,11:15:37.09:314,37,0	0/0:16,0:17:41.96:0,42,464	0/0:23,0:23:63.19:0,63,727	0/0:34,0:34:87.25:0,87,997	0/0:25,0:25:69.19:0,69,786	0/0:28,2:30:23.28:0,23,767	0/0:26,0:26:69.19:0,69,783	0/0:18,1:19:17.62:0,18,433	0/0:21,0:21:60.18:0,60,693	0/0:24,0:24:66.17:0,66,743	0/0:34,1:35:74.84:0,75,1115	0/0:7,0:7:21.06:0,21,241
chr10	1763872	.	A	ACTCAAGTGTCATCTCATTTAGGGCAT	42298.55	PASS	AB=0.964;AC=54;AF=0.964;AN=56;BaseQRankSum=-1.777;DP=326;FS=16.456;HRun=0;HaplotypeScore=391.9804;InbreedingCoeff=-0.0365;MQ=71.45;MQ0=0;MQRankSum=-1.165;QD=129.75;ReadPosRankSum=2.569;VQSLOD=3.8692;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:11:27.09:1084,27,0	0/1:3,0:3:0.17:248,0,0	1/1:1,0:10:3.19:269,3,0	0/1:12,1:13:3.66:986,0,4	1/1:11,0:11:23.55:694,24,0	1/1:10,0:10:10.53:1332,11,0	1/1:12,0:12:34.16:1576,34,0	1/1:7,0:7:21.06:1251,21,0	1/1:16,0:16:37.37:2354,37,0	1/1:17,0:17:40.62:2192,41,0	1/1:11,0:11:27.09:1538,27,0	1/1:16,0:16:36.12:2322,36,0	1/1:13,0:13:39.13:2600,39,0	1/1:14,0:14:42.14:2250,42,0	1/1:8,0:8:18.06:885,18,0	1/1:17,0:17:39.13:2307,39,0	1/1:8,0:8:21.07:1393,21,0	1/1:7,0:7:11.25:677,11,0	1/1:10,0:10:24.08:1100,24,0	1/1:16,0:16:33.07:1788,33,0	1/1:9,0:9:27.09:1617,27,0	1/1:20,0:20:50.81:2745,51,0	1/1:10,0:10:21.06:1224,21,0	1/1:12,0:12:12.03:341,12,0	1/1:10,0:10:17.71:1581,18,0	1/1:17,0:17:48.14:3346,48,0	1/1:14,0:14:36.11:2092,36,0	1/1:4,0:4:7.27:507,7,0
chr10	1764521	.	C	CA	673.01	PASS	AB=0.604;AC=1;AF=0.018;AN=56;BaseQRankSum=-0.776;DP=638;FS=19.995;HRun=1;HaplotypeScore=201.8619;InbreedingCoeff=-0.0185;MQ=63.26;MQ0=0;MQRankSum=0.620;QD=23.21;ReadPosRankSum=1.101;VQSLOD=1.3565;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,117,1489	0/0:6,0:6:18.02:0,18,215	0/0:10,0:9:27.09:0,27,346	0/0:15,0:14:37.66:0,38,471	0/0:40,0:40:99:0,105,1345	0/0:22,0:22:63.20:0,63,815	0/0:13,0:13:39.13:0,39,506	0/0:18,0:18:51.17:0,51,661	0/0:19,0:19:54.18:0,54,701	0/0:30,0:30:84.27:0,84,1090	0/0:18,0:18:54.18:0,54,700	0/0:12,0:12:33.11:0,33,428	0/0:24,0:24:72.23:0,72,932	0/0:16,0:16:48.16:0,48,621	0/0:26,0:26:69.22:0,69,894	0/0:18,0:18:45.14:0,45,577	0/1:10,19:29:99:747,0,230	0/0:13,0:13:33.11:0,33,428	0/0:36,0:36:99:0,102,1289	0/0:23,0:23:63.20:0,63,817	0/0:23,0:23:66.21:0,66,848	0/0:32,0:32:90.28:0,90,1140	0/0:22,0:22:63.20:0,63,816	0/0:16,0:16:42.14:0,42,541	0/0:20,0:20:54.18:0,54,699	0/0:31,0:31:90.28:0,90,1154	0/0:39,0:39:99:0,108,1392	0/0:20,0:20:54.18:0,54,701
chr10	1765571	.	CGA	C	86.47	PASS	AB=0.957;AC=8;AF=0.182;AN=44;BaseQRankSum=1.217;DP=478;FS=1.511;HRun=0;HaplotypeScore=66.7304;InbreedingCoeff=0.2993;MQ=76.14;MQ0=2;MQRankSum=0.262;QD=1.04;ReadPosRankSum=1.718;VQSLOD=1.3878;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:2.92:0,3,23	1/1:11,0:11:6:56,6,0	0/0:30,0:24:0:0,0,0	./.	./.	0/0:19,0:19:9:0,9,94	0/0:10,0:12:3:0,3,26	0/0:20,0:20:3.74:0,4,9	0/0:22,0:22:6:0,6,66	0/0:21,0:21:3:0,3,28	0/0:9,0:9:3:0,3,25	0/0:17,0:17:12.01:0,12,137	./.	0/1:16,0:16:8.65:9,0,97	0/0:14,0:14:6.01:0,6,70	1/1:16,4:21:11.86:109,12,0	0/0:21,0:21:14.93:0,15,120	0/0:11,0:11:6:0,6,52	1/1:13,0:14:2.84:14,3,0	./.	0/1:19,2:21:16.71:17,0,103	0/0:18,0:23:3:0,3,26	./.	0/0:20,0:21:12.03:0,12,157	./.	0/0:15,0:15:6:0,6,53	0/0:15,0:15:12:0,12,130	0/0:13,0:13:8.98:0,9,100
chr10	1766053	.	T	TA	1310.23	PASS	AB=0.917;AC=5;AF=0.089;AN=56;BaseQRankSum=0.089;DP=579;FS=1.091;HRun=8;HaplotypeScore=56.4540;InbreedingCoeff=0.8244;MQ=72.40;MQ0=0;MQRankSum=-3.042;QD=18.45;ReadPosRankSum=1.534;VQSLOD=3.5427;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,33:34:96.29:1108,96,0	0/1:10,1:11:1.59:2,0,241	0/0:11,0:10:20.97:0,21,184	0/0:10,0:10:10.92:0,11,113	0/0:23,0:23:65.96:0,66,582	0/0:22,0:22:63:0,63,567	0/0:25,0:25:72.03:0,72,655	0/0:31,0:31:84:0,84,758	0/0:31,0:31:90.05:0,90,823	0/0:28,0:28:78.02:0,78,709	0/0:30,2:32:49.38:0,49,695	0/0:5,0:5:12.01:0,12,110	0/0:13,0:13:36.02:0,36,329	0/0:21,0:21:54:0,54,490	0/0:21,0:21:60.03:0,60,549	0/0:22,0:22:60:0,60,539	1/1:2,1:26:59.86:323,60,0	0/0:15,0:15:35.99:0,36,324	0/0:17,0:17:44.97:0,45,400	0/0:37,0:37:95.94:0,96,862	0/0:5,0:5:14.99:0,15,130	0/0:19,0:19:48:0,48,430	0/0:27,0:27:71.99:0,72,649	0/0:10,0:10:27.01:0,27,247	0/0:25,0:25:63.03:0,63,576	0/0:19,0:19:45.02:0,45,412	0/0:19,0:19:47.99:0,48,428	0/0:20,0:20:60.03:0,60,549
chr10	1766971	.	TTGTTGCTGCTGCTGC	T	1542.10	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=5.131;DP=464;FS=0.587;HRun=0;HaplotypeScore=167.3672;InbreedingCoeff=0.5710;MQ=66.93;MQ0=7;MQRankSum=1.137;QD=13.89;ReadPosRankSum=-0.311;VQSLOD=2.6703;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:17:41.84:343,42,0	0/0:4,0:4:8.99:0,9,74	0/0:26,0:19:57.01:0,57,567	0/0:24,0:18:29.53:0,30,359	0/0:6,0:6:11.96:0,12,94	0/0:10,0:10:29.79:0,30,359	0/0:25,0:25:75.05:0,75,2682	0/0:16,0:14:35.83:0,36,302	1/1:1,25:26:21.07:880,21,0	0/0:10,0:10:18.02:0,18,167	0/0:6,0:6:14.99:0,15,127	0/0:15,0:15:39.09:0,39,1500	0/0:20,0:20:60.12:0,60,2720	0/0:18,0:18:51.09:0,51,1856	0/0:22,0:22:60.61:0,61,2859	0/0:12,0:12:34.33:0,34,1726	0/1:31,0:31:32.05:32,0,275	0/0:24,0:23:63.10:0,63,3024	0/0:17,0:16:23.89:0,24,220	0/0:5,0:5:7.19:0,7,55	0/0:36,0:35:95.85:0,96,1146	0/0:10,0:10:23.97:0,24,201	0/0:10,0:10:20.44:0,20,153	0/0:29,0:29:78.10:0,78,3415	0/0:8,0:8:15.93:0,16,130	1/1:10,0:10:23.95:213,24,0	0/1:22,0:22:99:172,0,1212	0/1:4,0:4:12.04:60,0,12
chr10	1766974	.	TTGCTGCTGCTGC	T	689.10	PASS	AC=4;AF=0.111;AN=36;BaseQRankSum=4.799;DP=453;FS=3.010;HRun=0;HaplotypeScore=139.3482;InbreedingCoeff=0.5541;MQ=62.71;MQ0=9;MQRankSum=-4.907;QD=12.76;ReadPosRankSum=1.028;VQSLOD=2.6843;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:5,0:5:3.01:0,3,100	./.	./.	0/0:6,0:5:3.01:0,3,99	0/0:10,0:10:3.01:0,3,140	0/0:26,0:26:42.14:0,42,1919	0/0:15,0:13:2.96:0,3,19	1/1:25,0:25:21.07:585,21,0	./.	./.	0/0:13,0:16:21.07:0,21,1020	0/0:18,0:19:42.14:0,42,2045	0/0:17,0:17:24.08:0,24,1231	0/0:21,0:21:39.12:0,39,2056	0/0:12,0:12:24.07:0,24,1234	1/1:14,15:29:6.02:205,6,0	0/0:25,0:24:51.16:0,51,2399	./.	./.	0/0:35,0:34:6.02:0,6,331	./.	./.	0/0:28,0:31:51.18:0,51,2665	./.	0/0:11,0:11:0:0,0,0	0/0:17,0:21:24.08:0,24,1159	0/0:4,0:4:2.99:0,3,24
chr10	1779753	.	T	TC	220.23	PASS	AC=14;AF=1.000;AN=14;DP=51;FS=0.000;HRun=0;HaplotypeScore=6.4516;MQ=21.36;MQ0=15;QD=12.95;VQSLOD=3.4426;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	./.	./.	./.	1/1:2,0:1:2.97:20,3,0	1/1:2,0:2:5.97:56,6,0	1/1:1,1:1:2.97:20,3,0	./.	./.	1/1:2,1:1:2.97:20,3,0	./.	./.	./.	./.	1/1:1,4:4:8.82:109,9,0	./.	./.	./.	./.	1/1:1,0:1:2.92:17,3,0	./.	./.	./.	./.	1/1:1,1:1:3.01:48,3,0
chr10	1781070	.	A	AC	7137.61	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=0.026;DP=570;FS=3.768;HRun=5;HaplotypeScore=221.2467;InbreedingCoeff=0.9697;MQ=67.74;MQ0=0;MQRankSum=-4.460;QD=13.05;ReadPosRankSum=3.343;VQSLOD=2.6161;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:34,2:36:83.61:527,84,0	1/1:6,1:7:16.28:84,16,0	0/0:9,0:9:11.15:0,11,111	0/0:13,0:14:30.72:0,31,225	1/1:24,2:26:36.78:280,37,0	1/1:31,0:30:47.13:337,47,0	1/1:18,0:17:46.87:316,47,0	1/1:35,2:34:75.42:486,75,0	1/1:16,0:16:33.69:205,34,0	1/1:21,2:23:49.55:433,50,0	1/1:18,1:17:28.15:157,28,0	1/1:18,0:18:35.90:229,36,0	1/1:21,0:21:50.12:259,50,0	1/1:24,1:25:42.44:258,42,0	1/1:17,1:18:45.14:238,45,0	1/1:23,1:24:53.23:346,53,0	1/1:20,0:20:34.21:257,34,0	1/1:15,0:15:41.03:231,41,0	1/1:23,3:26:63.08:383,63,0	1/1:25,1:25:61.20:314,61,0	1/1:23,0:23:50.05:330,50,0	1/1:18,1:17:39.28:239,39,0	1/1:13,0:13:20.75:108,21,0	1/1:19,0:19:42.53:250,43,0	1/1:16,0:16:33.12:187,33,0	1/1:15,1:16:43.16:283,43,0	1/1:25,0:24:59.43:299,59,0	1/1:10,0:10:23.52:101,24,0
chr10	1781642	.	C	CAACCCTGCCAAAAGCAG	1310.82	PASS	AB=0.778;AC=18;AF=0.900;AN=20;BaseQRankSum=-0.212;DP=27;FS=6.419;HRun=0;HaplotypeScore=28.8900;InbreedingCoeff=-0.2972;MQ=185.36;MQ0=0;MQRankSum=-1.694;QD=52.43;ReadPosRankSum=-1.799;VQSLOD=1.1888;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	1/1:1,0:1:2.98:22,3,0	0/1:5,0:7:22.44:536,0,22	0/1:5,1:7:14.02:551,0,14	1/1:2,0:2:3.01:52,3,0	1/1:2,0:2:3.01:38,3,0	./.	1/1:2,0:2:3.01:53,3,0	./.	./.	1/1:1,0:1:3:25,3,0	./.	./.	./.	./.	./.	./.	./.	./.	./.	1/1:1,0:1:3.01:41,3,0	./.	./.	./.	./.	1/1:1,0:1:3.01:50,3,0	1/1:1,0:1:3:25,3,0	./.
chr10	1782966	.	AC	A	6926.04	PASS	AB=0.663;AC=45;AF=0.804;AN=56;BaseQRankSum=9.562;DP=472;FS=13.604;HRun=1;HaplotypeScore=378.0297;InbreedingCoeff=0.2775;MQ=49.05;MQ0=0;MQRankSum=-3.388;QD=15.22;ReadPosRankSum=9.242;VQSLOD=1.9003;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,6:6:6.86:49,7,0	1/1:0,8:8:23.92:190,24,0	0/0:8,0:8:8.78:0,9,92	0/0:3,0:3:4.09:0,4,16	1/1:7,22:29:65.55:512,66,0	1/1:4,13:17:38.90:328,39,0	1/1:3,8:11:23.85:183,24,0	0/1:10,15:25:99:254,0,125	1/1:5,11:16:32.89:263,33,0	0/1:14,26:40:92.77:465,0,93	0/1:5,7:12:0.03:150,0,0	1/1:3,16:19:46.67:365,47,0	1/1:7,13:19:38.88:311,39,0	1/1:4,15:19:44.89:365,45,0	1/1:6,11:17:10.91:237,11,0	1/1:10,27:37:80.79:651,81,0	1/1:5,5:9:8.97:70,9,0	1/1:2,1:3:2.97:20,3,0	0/1:4,3:7:29.55:30,0,48	1/1:12,19:31:56.85:461,57,0	1/1:2,2:4:5.67:34,6,0	1/1:9,14:23:42.34:338,42,0	1/1:5,14:19:22.92:320,23,0	0/0:5,1:6:1.82:0,2,5	1/1:7,16:23:23.34:334,23,0	1/1:1,15:16:41.82:315,42,0	1/1:10,29:38:69.74:665,70,0	0/1:2,1:3:14:18,0,14
chr10	1785653	.	AT	A	1854.49	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=12.209;DP=577;FS=1.203;HRun=13;HaplotypeScore=63.9936;InbreedingCoeff=0.9751;MQ=65.75;MQ0=1;MQRankSum=-0.374;QD=11.24;ReadPosRankSum=1.407;VQSLOD=3.4154;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,0:42:60.30:177,60,0	0/0:9,0:9:21.03:0,21,204	0/0:16,0:9:14.61:0,15,98	0/0:14,0:9:7.80:0,8,51	0/0:26,1:28:56.03:0,56,681	0/0:20,0:20:60.09:0,60,579	0/0:13,0:13:27.04:0,27,263	1/1:5,27:32:59.27:542,59,0	1/1:3,24:27:65.58:481,66,0	0/0:21,0:22:47.85:0,48,452	0/0:23,0:23:51.08:0,51,496	0/0:21,0:22:62.90:0,63,577	0/0:22,0:22:29.64:0,30,430	0/0:18,0:20:47.75:0,48,437	0/0:21,0:21:57.09:0,57,555	0/0:23,0:23:60.06:0,60,567	1/1:3,0:23:36.66:108,37,0	0/0:15,0:15:39.06:0,39,379	0/0:23,0:23:60.54:0,61,571	0/0:13,1:16:20.01:0,20,331	0/0:21,0:22:51.07:0,51,490	0/0:16,1:17:23.03:0,23,358	0/0:15,0:15:42.07:0,42,409	0/0:25,0:26:65.86:0,66,601	0/0:23,0:25:56.99:0,57,518	1/1:1,20:21:56.64:416,57,0	1/1:2,13:15:32.80:241,33,0	1/1:1,4:5:11.93:88,12,0
chr10	1785828	.	GA	G	2201.37	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.829;DP=557;FS=4.128;HRun=1;HaplotypeScore=51.3011;InbreedingCoeff=0.9817;MQ=56.29;MQ0=8;MQRankSum=1.608;QD=35.51;ReadPosRankSum=-1.362;VQSLOD=3.0374;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:81.25:0,81,1269	0/0:10,0:10:30.10:0,30,480	0/0:19,0:6:14.97:0,15,207	0/0:11,0:4:12.03:0,12,168	0/0:26,0:26:75.26:0,75,1199	0/0:24,0:24:72.23:0,72,1126	0/0:21,0:21:63.18:0,63,960	0/0:34,0:33:99:0,99,1557	0/0:21,0:21:63.20:0,63,982	0/0:17,0:17:51.17:0,51,815	0/0:13,0:13:39.13:0,39,621	0/0:13,0:13:39.13:0,39,622	0/0:24,0:24:72.23:0,72,1125	0/0:11,0:11:33.10:0,33,505	0/0:28,0:28:84.27:0,84,1320	0/0:25,0:25:75.26:0,75,1199	0/0:20,0:20:51.17:0,51,814	0/0:14,0:14:42.14:0,42,671	0/0:25,0:23:63.68:0,64,987	0/0:28,0:28:84.29:0,84,1343	0/0:9,0:9:21.05:0,21,311	0/0:24,0:24:69.22:0,69,1080	0/0:14,0:14:42.14:0,42,671	0/0:17,0:17:51.15:0,51,790	0/0:14,0:14:42.14:0,42,672	1/1:0,24:23:69.23:961,69,0	1/1:0,20:20:48.16:671,48,0	1/1:0,18:18:51.17:713,51,0
chr10	1785893	.	TGAGGAA	T	995.86	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.089;DP=494;FS=6.490;HRun=0;HaplotypeScore=100.8129;InbreedingCoeff=0.9398;MQ=66.81;MQ0=0;MQRankSum=-6.262;QD=30.18;ReadPosRankSum=1.076;VQSLOD=2.7740;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,13:18:27.09:578,27,0	0/0:3,0:3:6.02:0,6,201	0/0:12,0:11:24.08:0,24,618	0/0:19,0:13:22.92:0,23,425	0/0:24,0:24:54.18:0,54,1861	0/0:17,0:17:48.15:0,48,1569	0/0:16,0:16:36.06:0,36,1080	0/0:24,0:24:63.20:0,63,1954	0/0:23,0:23:63.19:0,63,1963	0/0:13,0:13:39.08:0,39,1185	0/0:12,0:12:27.09:0,27,929	0/0:13,0:13:36.12:0,36,1241	0/0:27,0:27:75.24:0,75,2505	0/0:16,0:16:45.14:0,45,1466	0/0:33,0:33:93.23:0,93,2752	0/0:19,0:19:54.17:0,54,1746	1/1:3,12:15:24.08:538,24,0	0/0:10,0:10:30.09:0,30,956	0/0:17,0:17:39.09:0,39,1034	0/0:25,0:25:66.23:0,66,2215	0/0:16,0:16:45.14:0,45,1443	0/0:19,0:19:45.13:0,45,1323	0/0:8,0:8:18.02:0,18,461	0/0:19,0:19:45.15:0,45,1545	0/0:15,0:15:33.10:0,33,984	0/0:23,0:23:69.21:0,69,2058	0/0:27,0:27:69.21:0,69,2118	0/0:11,0:11:33.11:0,33,1080
chr10	1786108	.	G	GA	1973.20	PASS	AB=0.920;AC=17;AF=0.304;AN=56;BaseQRankSum=-1.464;DP=401;FS=24.166;HRun=12;HaplotypeScore=52.9711;InbreedingCoeff=0.6158;MQ=72.24;MQ0=1;MQRankSum=-0.838;QD=10.67;ReadPosRankSum=-2.829;VQSLOD=0.3528;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,17:25:16.02:322,16,0	0/0:10,0:10:23.84:0,24,175	0/0:9,0:10:2.86:0,3,58	0/0:8,0:7:8.65:0,9,56	0/1:9,2:11:20.37:20,0,35	0/0:8,0:9:25.90:0,26,181	0/0:8,0:8:20.85:0,21,153	1/1:6,27:34:53:640,53,0	1/1:2,16:21:53.59:480,54,0	0/0:7,0:7:5.93:0,6,44	0/0:7,0:7:14.91:0,15,109	0/0:12,0:15:35.89:0,36,236	0/0:12,1:14:31.83:0,32,225	0/0:11,0:11:19.63:0,20,134	0/0:13,1:16:8.50:0,9,215	0/0:19,0:19:41.67:0,42,306	1/1:5,13:17:30.05:292,30,0	0/0:14,1:15:0.64:0,1,168	0/1:19,2:21:22.37:22,0,254	0/0:15,0:16:28.81:0,29,202	0/0:13,1:15:5.67:0,6,196	0/0:12,0:12:35.80:0,36,262	0/0:6,0:8:19.93:0,20,137	0/0:15,0:15:41.76:0,42,306	0/1:11,0:11:3.38:3,0,110	1/1:5,2:12:1.36:97,1,0	1/1:7,0:19:31.22:158,31,0	1/1:2,1:12:22.88:125,23,0
chr10	1786195	.	AAAT	A	1773	PASS	AB=1.000;AC=8;AF=0.154;AN=52;BaseQRankSum=2.056;DP=231;FS=10.726;HRun=0;HaplotypeScore=38.5306;InbreedingCoeff=0.2649;MQ=56.30;MQ0=1;MQRankSum=1.465;QD=20.15;ReadPosRankSum=-5.121;VQSLOD=0.1398;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:10.02:0,10,249	0/0:3,0:3:9.03:0,9,141	0/0:4,0:2:6.02:0,6,74	./.	0/0:13,0:13:36.12:0,36,708	0/0:10,0:10:30.10:0,30,662	0/0:1,0:1:3.01:0,3,66	1/1:5,33:38:99:1445,104,0	1/1:6,0:6:5.81:32,6,0	0/0:7,0:7:21.07:0,21,347	0/0:8,0:8:24.08:0,24,385	0/0:6,0:6:18.06:0,18,309	0/0:2,0:2:6.02:0,6,103	0/0:6,0:6:18.06:0,18,339	0/0:3,0:3:9.03:0,9,170	0/0:5,0:5:12.03:0,12,194	0/1:14,0:14:58.99:59,0,122	0/0:15,0:15:45.15:0,45,706	0/0:13,0:13:39.13:0,39,599	0/0:4,0:4:12.04:0,12,177	0/0:4,0:4:12.04:0,12,207	./.	0/0:6,0:6:18.06:0,18,281	0/0:6,0:6:15.05:0,15,331	0/0:13,0:13:39.11:0,39,692	0/1:7,0:7:62.26:148,0,62	0/1:8,0:8:95.64:103,0,96	0/1:15,0:15:99:124,0,260
chr10	1786198	.	T	TA	2535.43	PASS	AB=0.786;AC=11;AF=0.204;AN=54;BaseQRankSum=1.527;DP=231;FS=0.536;HRun=3;HaplotypeScore=26.2778;InbreedingCoeff=0.7202;MQ=56.66;MQ0=1;MQRankSum=0.843;QD=26.97;ReadPosRankSum=-0.707;VQSLOD=2.4605;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:8,2:11:15.16:120,0,15	0/0:3,0:3:9.03:0,9,112	0/0:3,0:2:6.02:0,6,69	./.	0/0:12,0:12:36.11:0,36,446	0/0:11,0:11:30.09:0,30,372	0/0:1,0:1:3.01:0,3,37	1/1:34,1:35:84.33:1029,84,0	0/0:0,0:6:5.49:0,5,24	0/0:7,0:7:21.07:0,21,259	0/0:9,0:9:27.08:0,27,334	0/0:6,0:6:18.06:0,18,222	0/0:2,0:2:6.02:0,6,74	0/0:6,0:6:18.06:0,18,223	0/0:3,0:3:9.03:0,9,112	0/0:5,0:5:12.02:0,12,136	1/1:6,6:14:30.06:290,30,0	0/0:15,0:15:44.50:0,45,528	0/0:13,0:13:39.12:0,39,477	0/0:5,0:5:15.03:0,15,172	0/0:4,0:4:12.04:0,12,149	0/0:1,0:1:3:0,3,26	0/0:7,0:7:18.06:0,18,223	0/0:5,0:5:15.05:0,15,186	0/0:13,0:13:39.10:0,39,459	1/1:0,7:7:21.07:292,21,0	1/1:0,11:11:24.08:338,24,0	1/1:1,15:16:45.15:638,45,0
chr10	1786345	.	G	GT	807.67	PASS	AB=0.857;AC=5;AF=0.089;AN=56;BaseQRankSum=-7.876;DP=418;FS=4.981;HRun=10;HaplotypeScore=41.8382;InbreedingCoeff=0.6978;MQ=80.57;MQ0=0;MQRankSum=-2.918;QD=13.03;ReadPosRankSum=-1.530;VQSLOD=2.5321;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,1:24:30.92:0,31,456	0/0:5,0:5:14.98:0,15,123	0/0:15,0:15:32.87:0,33,263	0/0:12,0:12:20.90:0,21,163	0/0:11,0:11:29.95:0,30,246	0/0:17,1:18:9.92:0,10,285	0/0:12,0:12:32.94:0,33,268	1/1:15,15:32:59.78:577,60,0	1/1:4,13:17:11.47:327,11,0	0/0:10,0:10:17.97:0,18,148	0/0:13,0:13:32.93:0,33,271	0/0:20,0:20:47.90:0,48,391	0/0:16,0:16:32.94:0,33,270	0/0:10,0:10:29.97:0,30,246	0/0:17,0:17:47.91:0,48,391	0/0:15,0:15:41.95:0,42,345	0/0:23,0:23:62.88:0,63,511	0/0:18,0:18:50.93:0,51,419	0/0:14,0:14:38.95:0,39,320	0/0:13,0:13:35.96:0,36,296	0/0:11,0:11:29.95:0,30,246	0/0:4,0:4:11.99:0,12,98	0/0:12,0:12:20.94:0,21,172	0/0:14,1:15:6.96:0,7,264	0/1:10,2:12:28.01:28,0,210	0/0:18,0:18:38.94:0,39,320	0/0:21,0:21:56.91:0,57,468	0/0:9,0:9:26.97:0,27,222
chr10	1786859	.	CAGACACAG	C	999.98	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=4.713;DP=643;FS=12.404;HRun=0;HaplotypeScore=162.6560;InbreedingCoeff=0.6545;MQ=59.13;MQ0=9;MQRankSum=-0.670;QD=16.67;ReadPosRankSum=-3.676;VQSLOD=1.5181;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:6.58:0,7,465	0/0:9,0:9:27.08:0,27,666	0/0:18,0:11:31.62:0,32,430	0/0:24,0:12:35.91:0,36,736	0/0:25,0:24:57.20:0,57,1415	0/0:23,0:23:39.58:0,40,1285	0/0:22,0:23:32.70:0,33,1388	1/1:2,24:25:71.93:910,72,0	1/1:20,0:20:4.23:198,4,0	0/0:32,0:32:87.25:0,87,2353	0/0:18,0:18:39.12:0,39,806	0/0:23,0:23:55.05:0,55,1677	0/0:21,0:21:45.15:0,45,1482	0/0:25,0:25:53.86:0,54,1503	0/0:25,0:25:66.22:0,66,1857	0/0:18,0:18:48.13:0,48,1163	0/0:23,0:23:16.03:0,16,412	0/0:23,0:24:69.17:0,69,1773	0/1:14,0:12:7.76:8,0,693	0/0:34,0:33:46.14:0,46,1166	0/0:36,0:34:76.54:0,77,1811	0/0:21,0:21:44.78:0,45,1265	0/0:22,0:22:52.55:0,53,1398	0/0:24,0:25:65.91:0,66,1915	0/0:20,0:20:51.17:0,51,1508	0/0:23,0:22:8.89:0,9,680	0/0:19,0:19:20.80:0,21,778	0/0:13,0:14:8.60:0,9,227
chr10	1789350	.	TGTG	T	4049.22	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=11.909;DP=724;FS=1.388;HRun=0;HaplotypeScore=101.8070;InbreedingCoeff=0.9998;MQ=90.26;MQ0=0;MQRankSum=-1.641;QD=36.48;ReadPosRankSum=5.203;VQSLOD=4.2299;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,36:43:87.30:1398,87,0	0/0:10,0:10:30.10:0,30,662	0/0:29,0:29:83.29:0,83,1713	0/0:28,0:28:48.19:0,48,1120	0/0:27,0:27:69.22:0,69,1429	0/0:30,0:30:84.29:0,84,1853	0/0:27,0:27:78.24:0,78,1672	0/0:40,0:40:99:0,99,2066	1/1:2,23:25:63.21:1012,63,0	0/0:19,0:19:51.18:0,51,1121	0/0:22,0:22:60.19:0,60,1281	0/0:33,0:33:93.32:0,93,2052	0/0:25,0:25:75.26:0,75,1648	0/0:19,0:19:57.20:0,57,1222	0/0:21,0:21:60.21:0,60,1325	0/0:29,0:29:87.30:0,87,1880	1/1:4,39:43:99:1639,102,0	0/0:25,0:25:66.23:0,66,1456	0/0:13,0:13:36.12:0,36,745	0/0:18,0:18:48.16:0,48,1051	0/0:36,0:36:92.91:0,93,2045	0/0:30,0:30:84.29:0,84,1833	0/0:19,0:19:54.19:0,54,1157	0/0:26,0:26:72.25:0,72,1555	0/0:21,0:21:63.22:0,63,1367	0/0:27,0:27:78.27:0,78,1716	0/0:22,0:22:54.18:0,54,1192	0/0:17,0:17:51.18:0,51,1126
chr10	1789513	.	T	TTG	786.05	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-5.493;DP=692;FS=3.066;HRun=0;HaplotypeScore=98.0327;InbreedingCoeff=0.9988;MQ=75.31;MQ0=3;MQRankSum=-2.376;QD=27.11;ReadPosRankSum=1.484;VQSLOD=4.7886;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:61.07:0,61,741	0/0:16,0:16:42.13:0,42,517	0/0:31,0:31:45.92:0,46,718	0/0:31,0:32:65.98:0,66,747	0/0:30,0:30:66.19:0,66,799	0/0:24,0:24:63.18:0,63,761	0/0:28,0:28:78.22:0,78,936	0/0:10,0:21:31:0,31,150	1/1:5,24:26:54.18:881,54,0	0/0:30,0:30:75.22:0,75,902	0/0:33,0:33:93.28:0,93,1133	0/0:17,0:17:51.16:0,51,628	0/0:24,0:24:60.18:0,60,730	0/0:19,0:19:48.15:0,48,591	0/0:20,0:20:36.11:0,36,443	0/0:30,0:30:72.21:0,72,874	0/0:27,0:27:63.20:0,63,776	0/0:24,0:24:63.16:0,63,758	0/0:21,0:21:42.11:0,42,497	0/0:19,0:19:45.13:0,45,544	0/0:29,0:29:72.23:0,72,886	0/0:24,0:25:54:0,54,642	0/0:24,0:24:51.13:0,51,593	0/0:23,0:23:48.14:0,48,579	0/0:23,0:23:54.16:0,54,654	0/0:25,0:25:66.20:0,66,802	0/0:23,0:23:54.17:0,54,665	0/0:11,0:11:30.09:0,30,369
chr10	1790961	.	TA	T	407.29	PASS	AB=0.852;AC=8;AF=0.143;AN=56;BaseQRankSum=1.991;DP=516;FS=1.174;HRun=15;HaplotypeScore=68.5109;InbreedingCoeff=0.1518;MQ=71.09;MQ0=1;MQRankSum=0.409;QD=3.21;ReadPosRankSum=2.990;VQSLOD=-0.1681;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:7,18:29:26.53:202,0,27	0/0:7,0:8:17.84:0,18,146	0/0:24,0:15:20.14:0,20,147	0/1:12,0:8:9.91:10,0,22	0/0:36,0:36:62.77:0,63,605	0/0:19,1:21:19.65:0,20,284	0/0:12,0:12:23.74:0,24,197	0/0:8,0:18:34.85:0,35,209	0/0:9,0:13:34.06:0,34,205	0/1:16,2:18:2.54:3,0,228	0/0:14,0:18:10.18:0,10,198	0/1:10,2:13:28.66:29,0,111	0/0:16,0:16:26.97:0,27,198	0/0:16,0:16:18.46:0,18,260	0/0:14,0:14:32.99:0,33,288	0/0:9,1:12:10.40:0,10,191	1/1:3,16:19:41.36:268,41,0	0/0:18,0:19:47.83:0,48,409	0/1:20,4:24:24.54:25,0,195	0/0:25,1:26:34.57:0,35,400	0/1:9,1:11:4.44:4,0,74	0/0:11,0:13:17.84:0,18,146	0/0:24,2:27:18.14:0,18,379	0/0:10,0:11:23.83:0,24,195	0/0:19,1:22:25.68:0,26,314	0/0:16,0:25:38.52:0,39,224	0/0:12,0:22:58.38:0,58,385	0/0:8,0:13:20.20:0,20,121
chr10	1791350	.	CGAAAAAAAAAA	C	872.11	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=4.850;DP=595;FS=6.200;HRun=0;HaplotypeScore=181.9652;InbreedingCoeff=0.6405;MQ=63.99;MQ0=13;MQRankSum=-3.204;QD=21.27;ReadPosRankSum=-2.534;VQSLOD=1.4167;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:81.28:0,81,3373	0/0:6,0:6:18.06:0,18,978	0/0:17,0:9:26.95:0,27,686	0/1:24,0:11:25.09:25,0,462	0/0:39,0:38:93.32:0,93,4802	0/0:21,0:21:45.09:0,45,2211	0/0:31,0:30:60.21:0,60,3190	1/1:6,11:13:33.11:953,33,0	0/0:17,0:17:33.11:0,33,1364	0/0:23,0:23:45.15:0,45,2293	0/0:16,0:16:33.11:0,33,1678	0/0:19,0:18:48.15:0,48,2312	0/0:20,0:20:45.15:0,45,2345	0/0:23,0:22:54.19:0,54,2541	0/0:20,0:20:51.18:0,51,2672	0/0:20,0:20:42.13:0,42,2143	0/0:38,0:38:84.29:0,84,3472	0/0:29,0:28:66.18:0,66,3077	0/0:24,0:23:66.23:0,66,3171	0/0:24,0:24:63.22:0,63,3032	0/0:15,0:13:24.07:0,24,1125	0/0:23,0:20:51.18:0,51,2539	0/0:22,0:22:57.20:0,57,2854	0/0:13,0:13:36.08:0,36,1788	0/0:15,0:15:36.11:0,36,1628	0/0:18,0:18:48.03:0,48,1357	0/0:18,0:18:26.88:0,27,936	0/0:6,0:7:21.07:0,21,729
chr10	1791351	.	GA	G	1708.67	PASS	AB=0.913;AC=17;AF=0.304;AN=56;BaseQRankSum=11.722;DP=591;FS=8.708;HRun=10;HaplotypeScore=69.8015;InbreedingCoeff=0.7303;MQ=64.04;MQ0=12;MQRankSum=-0.707;QD=8.06;ReadPosRankSum=2.655;VQSLOD=1.6106;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,29:35:29.47:622,29,0	0/0:6,0:6:18.05:0,18,199	0/0:17,1:9:14.52:0,15,114	0/0:22,1:11:2.83:0,3,45	0/0:39,0:38:69.29:0,69,964	0/0:20,1:21:16.06:0,16,405	0/0:30,1:30:37.12:0,37,626	1/1:16,0:12:18.31:51,18,0	1/1:6,11:17:32.98:286,33,0	0/0:22,1:23:19.06:0,19,438	0/0:16,0:16:33.09:0,33,365	0/0:18,0:17:48.11:0,48,514	0/1:18,1:19:3.67:4,0,389	0/0:23,0:22:32.80:0,33,545	0/1:17,2:19:1.01:1,0,427	0/0:20,0:20:45.08:0,45,473	1/1:8,31:39:83.08:727,83,0	0/0:28,0:27:39.54:0,40,631	0/0:23,1:23:40.16:0,40,670	0/0:23,0:23:63.17:0,63,692	0/0:14,1:13:0.96:0,1,209	0/1:20,3:20:27.03:27,0,407	0/0:23,0:23:33.79:0,34,566	0/0:13,0:13:36.06:0,36,385	0/0:15,0:15:33.87:0,34,336	1/1:2,0:18:29.14:87,29,0	1/1:3,0:18:18.33:54,18,0	1/1:1,0:7:14.26:42,14,0
chr10	1792020	.	GTTT	G	1347.56	PASS	AB=0.636;AC=7;AF=0.125;AN=56;BaseQRankSum=1.170;DP=647;FS=0.000;HRun=15;HaplotypeScore=115.7479;InbreedingCoeff=0.7419;MQ=77.31;MQ0=1;MQRankSum=-2.122;QD=15.49;ReadPosRankSum=5.210;VQSLOD=2.3357;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:34:48.76:0,49,474	0/0:10,0:11:30.07:0,30,479	0/0:35,1:28:44.23:0,44,498	0/0:16,0:16:22.53:0,23,279	0/0:23,0:29:75.15:0,75,1185	0/0:18,0:21:51.11:0,51,699	0/0:20,0:21:57.16:0,57,824	0/1:9,2:21:42.26:42,0,55	0/0:18,0:24:64.85:0,65,754	0/0:26,0:30:69.17:0,69,1042	0/0:21,0:27:74.27:0,74,1084	0/0:16,0:16:39.12:0,39,623	0/0:21,0:23:51.12:0,51,794	0/0:17,0:18:41.44:0,41,522	0/0:30,0:31:82.76:0,83,1330	0/0:15,0:18:45.10:0,45,676	0/0:19,0:33:76.59:0,77,662	0/0:22,0:24:63.09:0,63,872	0/0:25,0:26:51.10:0,51,694	0/0:21,0:27:69.16:0,69,1042	0/0:9,0:10:24.04:0,24,294	0/0:24,0:25:73.23:0,73,1041	0/0:13,0:14:27.07:0,27,389	0/0:20,0:20:45.13:0,45,722	0/0:18,0:19:42.99:0,43,662	1/1:3,15:19:0.43:394,0,0	1/1:8,25:32:64.13:718,64,0	1/1:2,11:14:27.02:331,27,0
chr10	1792450	.	G	GCAAA	3937.52	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=-3.042;DP=461;FS=30.385;HRun=0;HaplotypeScore=80.4318;InbreedingCoeff=0.8237;MQ=75.85;MQ0=0;MQRankSum=-6.045;QD=45.79;ReadPosRankSum=-2.659;VQSLOD=1.6496;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,15:19:42.06:915,42,0	0/0:8,0:8:18.06:0,18,311	0/0:26,0:26:14.80:0,15,563	0/0:17,0:17:36.03:0,36,565	0/0:15,0:15:42.14:0,42,700	0/0:11,0:11:30.09:0,30,489	0/0:15,0:15:39.13:0,39,674	1/1:20,19:40:78.25:1895,78,0	0/1:10,0:10:27.76:383,0,28	0/0:18,0:18:48.12:0,48,798	0/0:9,0:9:24.08:0,24,415	0/0:11,0:11:27.09:0,27,467	0/0:13,0:13:33.09:0,33,517	0/0:13,0:13:27.08:0,27,435	0/0:14,0:14:30.09:0,30,492	0/0:11,0:11:27.07:0,27,407	1/1:8,9:17:33:744,33,0	0/0:24,0:24:63.22:0,63,1089	0/0:23,0:23:54.18:0,54,903	0/0:16,0:16:36.11:0,36,590	0/0:18,0:18:42.14:0,42,726	0/0:14,0:14:27.09:0,27,442	0/0:17,0:17:45.15:0,45,753	0/0:11,0:11:33.11:0,33,566	0/0:6,0:6:15.04:0,15,233	0/0:24,0:24:66.22:0,66,1114	0/0:19,0:19:42.14:0,42,726	0/0:22,0:22:39.13:0,39,667
chr10	1792452	.	A	AAACC	2680.89	PASS	AB=0.842;AC=5;AF=0.089;AN=56;BaseQRankSum=6.881;DP=455;FS=23.140;HRun=0;HaplotypeScore=86.6238;InbreedingCoeff=0.1583;MQ=77.75;MQ0=0;MQRankSum=-6.685;QD=31.17;ReadPosRankSum=0.753;VQSLOD=1.5812;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:20:0.29:538,0,0	0/0:8,0:8:24.06:0,24,394	0/0:26,0:27:64.81:0,65,938	0/0:16,0:16:47.82:0,48,741	0/0:16,0:16:45.15:0,45,819	0/0:11,0:11:33.10:0,33,590	0/0:14,0:14:42.14:0,42,767	0/1:39,0:39:99:1255,0,217	0/1:1,9:10:32.87:542,0,33	0/0:17,0:17:51.17:0,51,926	0/0:9,0:9:24.08:0,24,455	0/0:12,0:12:33.09:0,33,564	0/0:14,0:14:39.12:0,39,669	0/0:12,0:12:36.09:0,36,585	0/0:14,0:14:39.11:0,39,643	0/0:10,0:10:30.10:0,30,531	0/1:17,0:17:45.81:456,0,46	0/0:24,0:24:72.18:0,72,1267	0/0:21,0:21:60.20:0,60,1104	0/0:16,0:16:45.10:0,45,748	0/0:17,0:17:51.10:0,51,867	0/0:11,0:11:27.09:0,27,509	0/0:17,0:17:51.15:0,51,899	0/0:11,0:11:33.11:0,33,626	0/0:6,0:6:15.05:0,15,279	0/0:25,0:25:72.23:0,72,1305	0/0:20,0:20:54.14:0,54,902	0/0:21,0:21:54.09:0,54,859
chr10	1792541	.	C	CTA	5635.87	PASS	AB=0.556;AC=13;AF=0.232;AN=56;BaseQRankSum=7.725;DP=350;FS=22.805;HRun=0;HaplotypeScore=44.7534;InbreedingCoeff=0.9081;MQ=80.65;MQ0=0;MQRankSum=-1.879;QD=52.18;ReadPosRankSum=0.339;VQSLOD=3.3645;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,10:14:39.05:698,39,0	0/0:3,0:3:9.03:0,9,138	0/0:13,0:13:35.68:0,36,474	0/0:6,0:6:18.06:0,18,270	0/0:26,0:26:75.25:0,75,1147	0/0:15,0:15:42.14:0,42,642	0/0:7,0:7:21.07:0,21,321	1/1:1,19:20:60.12:1020,60,0	1/1:0,8:8:24.08:462,24,0	0/0:15,0:15:45.15:0,45,671	0/0:11,0:11:33.11:0,33,505	0/0:7,0:7:21.07:0,21,321	0/0:9,0:9:21.04:0,21,296	0/0:7,0:7:21.07:0,21,320	0/0:11,0:11:30.09:0,30,439	0/0:5,0:5:15.05:0,15,229	1/1:0,19:19:54.19:1041,54,0	0/0:26,0:26:78.15:0,78,1113	0/0:14,0:14:42.11:0,42,582	0/0:12,0:12:36.12:0,36,551	0/0:12,0:12:36.12:0,36,551	0/0:14,0:14:42.14:0,42,643	0/0:12,0:12:33.10:0,33,483	0/0:7,0:7:21.06:0,21,298	0/0:10,0:10:30.10:0,30,459	0/1:3,12:15:3.79:679,0,4	1/1:0,27:27:75.26:1447,75,0	1/1:0,5:5:15.05:289,15,0
chr10	1792986	.	T	TCCA	2991.10	PASS	AB=0.833;AC=10;AF=0.179;AN=56;BaseQRankSum=-8.155;DP=488;FS=1.883;HRun=0;HaplotypeScore=67.4773;InbreedingCoeff=0.7265;MQ=74.84;MQ0=1;MQRankSum=-1.736;QD=26.47;ReadPosRankSum=-0.061;VQSLOD=3.4832;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:14,17:31:51.17:994,51,0	0/0:11,0:11:21.05:0,21,275	0/0:33,0:24:30.04:0,30,358	0/1:24,0:19:10.71:11,0,174	0/0:14,0:14:36.12:0,36,497	0/0:26,0:27:51.14:0,51,690	0/0:25,0:25:39.11:0,39,510	0/0:15,0:15:21.03:0,21,273	0/0:19,0:19:45.15:0,45,627	0/0:10,0:10:18.06:0,18,246	0/0:9,0:9:24.07:0,24,318	0/0:24,0:25:57.15:0,57,762	0/0:24,0:24:36.12:0,36,500	0/0:15,0:15:39.09:0,39,497	0/0:18,0:18:30.10:0,30,418	0/0:22,0:22:39.13:0,39,543	1/1:4,20:25:9.35:915,9,0	0/0:19,0:19:51.15:0,51,692	0/0:15,0:14:21.07:0,21,293	0/0:8,0:8:15.05:0,15,209	0/0:19,0:19:39.13:0,39,538	0/0:8,0:8:15.05:0,15,203	0/0:5,0:5:9.03:0,9,125	0/0:24,0:24:51.17:0,51,706	0/0:10,0:10:21.07:0,21,293	1/1:7,8:15:27.09:535,27,0	1/1:6,8:14:30.10:590,30,0	0/1:2,2:4:32.79:111,0,33
chr10	1793302	.	C	CAGCCT	9707.47	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-1.862;DP=679;FS=14.219;HRun=0;HaplotypeScore=127.3356;InbreedingCoeff=0.9582;MQ=78.86;MQ0=0;MQRankSum=-10.580;QD=69.34;ReadPosRankSum=-0.549;VQSLOD=5.0566;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,38:43:99:2961,105,0	0/0:12,0:12:36.12:0,36,750	0/0:20,0:19:36.40:0,36,992	0/0:17,0:17:51.07:0,51,946	0/0:19,0:19:51.18:0,51,1087	0/0:22,0:22:60.21:0,60,1278	0/0:30,0:30:84.25:0,84,1653	0/0:31,0:31:90.29:0,90,1758	0/0:28,0:28:81.25:0,81,1647	0/0:32,0:32:96.32:0,96,1940	0/0:17,0:17:45.15:0,45,954	0/0:16,0:16:48.16:0,48,1018	0/0:31,0:31:90.31:0,90,1917	0/0:22,0:22:60.17:0,60,1199	0/0:26,0:26:75.24:0,75,1553	0/0:28,0:28:81.28:0,81,1699	1/1:2,30:34:72.25:2255,72,0	0/0:17,0:17:48.16:0,48,1023	0/0:24,0:24:63.20:0,63,1237	0/0:21,0:21:63.19:0,63,1234	0/0:37,0:37:99:0,108,2302	0/0:18,0:18:45.15:0,45,936	0/0:18,0:18:48.06:0,48,965	0/0:36,0:36:99:0,108,2178	0/0:17,0:17:48.16:0,48,1011	1/1:9,22:33:93.19:2481,93,0	1/1:5,21:25:65.96:1917,66,0	1/1:0,4:4:3.01:94,3,0
chr10	1794673	.	TTAAA	T	1047.58	PASS	AC=4;AF=0.074;AN=54;BaseQRankSum=6.701;DP=360;FS=1.758;HRun=0;HaplotypeScore=58.6150;InbreedingCoeff=0.7960;MQ=71.74;MQ0=0;MQRankSum=-1.364;QD=32.74;ReadPosRankSum=1.874;VQSLOD=3.6452;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,15:17:39.13:660,39,0	0/0:8,0:8:24.08:0,24,569	0/0:12,0:10:8.86:0,9,95	0/0:5,0:5:6.02:0,6,109	0/0:22,0:22:51.17:0,51,1230	0/0:16,0:16:45.14:0,45,1044	0/0:3,0:3:9.03:0,9,214	0/0:32,0:32:84.28:0,84,1999	0/0:7,0:7:15.04:0,15,325	0/0:25,0:25:54.19:0,54,1333	0/0:18,0:18:54.19:0,54,1311	0/0:6,0:6:12.03:0,12,249	0/0:9,0:9:12.03:0,12,248	0/0:10,0:10:21.07:0,21,494	0/0:7,0:7:18.05:0,18,375	0/0:8,0:8:12.04:0,12,299	1/1:2,13:15:30.10:508,30,0	0/0:18,0:18:54.17:0,54,1277	0/0:16,0:16:45.15:0,45,1083	0/0:24,0:24:54.11:0,54,1232	0/0:5,0:5:15.05:0,15,370	0/0:4,0:4:6.02:0,6,128	0/0:8,0:8:18.06:0,18,445	./.	0/0:23,0:23:42.14:0,42,1018	0/0:14,0:14:30.10:0,30,718	0/0:16,0:16:42.14:0,42,1017	0/0:12,0:12:27.09:0,27,616
chr10	1795950	.	AG	A	5033.59	PASS	AB=0.525;AC=9;AF=0.161;AN=56;BaseQRankSum=13.691;DP=671;FS=2.093;HRun=1;HaplotypeScore=67.1642;InbreedingCoeff=0.8663;MQ=71.16;MQ0=0;MQRankSum=-1.824;QD=38.13;ReadPosRankSum=1.131;VQSLOD=5.4504;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,30:30:84.28:1174,84,0	0/0:12,0:12:33.11:0,33,527	0/0:7,0:7:21.07:0,21,316	0/0:12,0:11:27.08:0,27,367	0/0:22,0:22:66.23:0,66,1052	0/0:38,0:38:99:0,114,1797	0/0:21,0:21:63.21:0,63,1007	0/0:31,0:31:93.28:0,93,1400	0/0:25,0:25:75.26:0,75,1199	0/0:31,0:31:93.27:0,93,1440	0/0:25,0:25:72.20:0,72,1127	0/0:28,0:28:84.26:0,84,1290	0/0:32,0:32:96.31:0,96,1507	0/0:23,0:23:66.21:0,66,1028	0/0:33,0:33:99:0,99,1553	0/0:23,0:23:69.24:0,69,1100	1/1:1,20:21:60.13:838,60,0	0/0:19,0:19:57.17:0,57,885	0/0:23,0:23:69.20:0,69,1036	0/0:19,0:19:57.18:0,57,883	0/0:44,0:44:99:0,132,2109	0/0:23,0:23:69.21:0,69,1075	0/0:18,0:18:54.17:0,54,840	0/0:14,0:14:42.14:0,42,671	0/0:16,0:16:45.04:0,45,673	0/1:4,38:42:68.49:1429,0,68	1/1:0,28:28:81.27:1131,81,0	1/1:0,11:11:33.11:461,33,0
chr10	1796234	.	GCA	G	421.09	PASS	AB=0.910;AC=19;AF=0.339;AN=56;BaseQRankSum=5.719;DP=636;FS=3.596;HRun=0;HaplotypeScore=108.0457;InbreedingCoeff=-0.2998;MQ=63.39;MQ0=9;MQRankSum=0.971;QD=1.07;ReadPosRankSum=-0.376;VQSLOD=2.0199;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:35:0.47:0,0,1	0/1:9,1:10:16.35:16,0,226	0/0:29,0:15:0.89:0,1,2	0/0:25,0:15:2.97:0,3,20	0/1:16,2:20:14.72:15,0,333	0/1:13,1:16:43.75:44,0,268	0/1:24,0:23:8.65:9,0,395	0/0:28,0:26:13.01:0,13,158	1/1:18,0:27:5.08:85,5,0	0/1:18,1:19:4.18:4,0,343	0/0:19,0:19:6.99:0,7,393	0/1:19,3:22:37.34:37,0,262	0/1:12,1:13:6.55:7,0,338	0/1:23,2:25:28.09:28,0,440	0/0:31,2:32:14.51:0,15,648	0/1:16,0:17:9.57:10,0,276	1/1:9,0:15:2.84:14,3,0	0/1:14,0:17:29.96:30,0,303	0/0:17,0:18:2.66:0,3,173	0/1:23,5:30:97.59:98,0,477	0/1:45,4:51:96.83:97,0,792	0/1:27,2:29:22.18:22,0,525	0/0:15,0:15:1.05:0,1,333	0/1:38,3:41:26.14:26,0,838	0/1:13,1:15:26.74:27,0,188	0/0:18,0:17:23.06:0,23,249	0/0:12,0:12:11.95:0,12,95	0/0:7,0:7:7.90:0,8,75
chr10	1796307	.	TACAC	T	518.66	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.562;DP=671;FS=11.135;HRun=0;HaplotypeScore=134.7768;InbreedingCoeff=0.9878;MQ=57.15;MQ0=10;MQRankSum=-0.425;QD=19.21;ReadPosRankSum=2.994;VQSLOD=2.8994;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:60.68:0,61,1450	0/0:17,0:17:45.15:0,45,1080	0/0:44,0:17:44.43:0,44,780	0/0:40,0:14:29.90:0,30,372	0/0:26,0:26:66:0,66,1511	0/0:10,0:11:23.87:0,24,515	0/0:24,0:24:62.70:0,63,1272	0/0:41,0:40:75.23:0,75,1637	1/1:9,18:27:35.88:613,36,0	0/0:22,0:23:64.73:0,65,1479	0/0:11,0:11:33.11:0,33,842	0/0:24,0:24:72.25:0,72,1790	0/0:17,0:17:47.95:0,48,1160	0/0:24,0:24:66.20:0,66,1532	0/0:22,0:22:57.65:0,58,1402	0/0:23,0:23:66.22:0,66,1615	0/0:18,0:18:30.57:0,31,744	0/0:22,0:22:62.76:0,63,1366	0/0:18,0:17:36.06:0,36,712	0/0:26,0:26:69.16:0,69,1491	0/0:60,0:60:99:0,133,2941	0/0:19,0:19:48.14:0,48,1054	0/0:17,0:18:50.96:0,51,1152	0/0:20,0:20:48.01:0,48,874	0/0:25,0:25:66.21:0,66,1608	0/0:14,0:14:36.11:0,36,730	0/0:12,0:11:30.06:0,30,643	0/0:7,0:7:18.06:0,18,425
chr10	1797619	.	GATGAGGACGTCATGGCTAC	G	378.83	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.088;DP=692;FS=1.701;HRun=0;HaplotypeScore=337.6562;InbreedingCoeff=0.9744;MQ=78.78;MQ0=0;MQRankSum=1.196;QD=21.05;ReadPosRankSum=-2.162;VQSLOD=1.5506;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:53:99:0,138,8680	0/0:5,0:5:15.05:0,15,1364	0/0:18,0:20:41.92:0,42,2085	0/0:14,0:16:33.11:0,33,1786	0/0:22,0:22:54.17:0,54,4125	0/0:26,0:26:54.18:0,54,4247	0/0:26,0:26:72.25:0,72,5028	1/1:12,6:18:18.03:469,18,0	0/0:36,0:36:99:0,102,8021	0/0:27,0:27:78.23:0,78,5334	0/0:17,0:17:48.16:0,48,4030	0/0:24,0:24:72.23:0,72,5714	0/0:24,0:24:69.24:0,69,5115	0/0:18,0:18:54.19:0,54,4439	0/0:34,0:34:93.32:0,93,7618	0/0:28,0:28:75.25:0,75,5765	0/0:40,0:40:99:0,111,8626	0/0:11,0:11:30.10:0,30,2597	0/0:20,0:20:51.18:0,51,2999	0/0:26,0:26:69.24:0,69,5703	0/0:55,0:55:99:0,120,7649	0/0:20,0:20:48.16:0,48,3617	0/0:15,0:15:42.14:0,42,3383	0/0:39,0:39:99:0,105,7878	0/0:11,0:11:33.11:0,33,2075	0/0:25,0:25:72.24:0,72,4468	0/0:25,0:25:69.21:0,69,5512	0/0:10,0:10:27.09:0,27,2125
chr10	1797791	.	CCACACACACACACACACA	C	490.02	PASS	AC=2;AF=0.037;AN=54;BaseQRankSum=2.658;DP=514;FS=6.748;HRun=0;HaplotypeScore=202.8202;InbreedingCoeff=0.5358;MQ=73.42;MQ0=19;MQRankSum=-2.012;QD=22.27;ReadPosRankSum=-0.543;VQSLOD=1.8061;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:29:8.91:0,9,474	0/0:6,0:6:0:0,0,0	./.	0/0:48,0:27:0:0,0,0	0/0:15,0:13:18.06:0,18,977	0/0:17,0:17:18.03:0,18,894	0/0:26,0:24:18.53:0,19,1145	0/0:18,0:17:11.19:0,11,73	1/1:12,10:22:12.04:575,12,0	0/0:19,0:19:22.73:0,23,940	0/0:13,0:13:18.03:0,18,952	0/0:17,0:16:30.09:0,30,1682	0/0:14,0:13:15.04:0,15,763	0/0:9,0:8:6.02:0,6,344	0/0:11,0:11:12.03:0,12,396	0/0:23,0:24:24.04:0,24,839	0/0:17,0:17:15.47:0,15,241	0/0:7,0:10:6.02:0,6,410	0/0:5,0:5:6.39:0,6,17	0/0:9,0:9:6.02:0,6,481	0/0:29,0:29:30.10:0,30,1562	0/0:9,0:9:12.03:0,12,486	0/0:16,0:16:15.02:0,15,493	0/0:26,0:24:27.08:0,27,1570	0/0:19,0:19:9.02:0,9,395	0/0:11,0:14:33.08:0,33,1474	0/0:21,0:21:21.05:0,21,1245	0/0:3,0:3:5.99:0,6,103
chr10	1798982	.	CT	C	884.22	PASS	AB=0.878;AC=10;AF=0.185;AN=54;BaseQRankSum=1.581;DP=386;FS=3.763;HRun=13;HaplotypeScore=47.9297;InbreedingCoeff=0.5470;MQ=70.20;MQ0=5;MQRankSum=1.031;QD=7.25;ReadPosRankSum=2.509;VQSLOD=2.0381;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:3,0:13:14.20:0,14,71	./.	0/0:29,0:14:17.63:0,18,126	0/1:36,0:12:4.56:5,0,33	0/0:12,0:12:24.03:0,24,229	0/0:11,2:13:8.12:0,8,230	0/0:8,0:8:14.12:0,14,133	0/0:24,0:24:39.14:0,39,194	1/1:2,13:15:32.81:241,33,0	0/0:15,0:14:39.05:0,39,374	0/0:9,0:9:20.97:0,21,193	0/1:9,0:9:3.87:4,0,128	0/0:7,0:7:20.52:0,21,184	0/1:12,1:13:1.31:1,0,148	0/0:13,0:12:22.54:0,23,187	0/0:7,0:7:14.85:0,15,126	0/0:7,0:18:15.18:0,15,93	0/0:13,0:13:24.11:0,24,238	0/0:16,0:16:41.06:0,41,374	0/0:22,1:24:28.93:0,29,401	0/0:5,0:5:6:0,6,54	0/0:5,0:6:11.86:0,12,102	0/0:16,0:16:39.06:0,39,379	0/0:2,0:2:6.01:0,6,58	0/0:11,2:14:4.98:0,5,196	1/1:4,16:20:21.50:321,21,0	1/1:2,20:22:53.38:391,53,0	0/1:2,5:7:4.24:70,0,4
chr10	1799510	.	TG	T	1976.11	PASS	AB=0.966;AC=7;AF=0.125;AN=56;BaseQRankSum=8.265;DP=685;FS=0.502;HRun=3;HaplotypeScore=59.6440;InbreedingCoeff=0.8852;MQ=56.03;MQ0=37;MQRankSum=1.542;QD=20.37;ReadPosRankSum=1.005;VQSLOD=3.0779;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:47:99:0,126,1814	0/0:11,0:10:21.07:0,21,302	0/1:27,0:12:0.32:0,0,347	0/0:29,0:11:18.47:0,18,418	0/0:28,0:25:60.20:0,60,863	0/0:18,0:18:51.16:0,51,710	0/0:23,0:18:42.14:0,42,605	0/0:35,0:28:81.26:0,81,1146	0/0:24,0:21:60.19:0,60,846	0/0:27,0:27:72.24:0,72,1025	0/0:20,0:20:48.11:0,48,647	0/0:17,0:16:48.16:0,48,689	0/0:22,0:20:54.18:0,54,777	0/0:16,0:16:45.15:0,45,648	0/0:21,0:20:57.19:0,57,821	0/0:21,0:19:54.17:0,54,758	0/0:31,0:29:80.79:0,81,1166	0/0:23,0:21:63.21:0,63,907	0/0:20,0:19:54.18:0,54,776	0/0:35,0:35:99:0,99,1421	0/0:34,0:34:93.31:0,93,1334	0/0:27,0:27:51.17:0,51,728	0/0:21,0:19:42.14:0,42,604	0/0:25,0:24:51.17:0,51,733	0/0:12,0:12:27.09:0,27,389	1/1:3,33:32:50.07:1072,50,0	1/1:1,27:27:75.24:929,75,0	1/1:0,5:5:9.03:111,9,0
chr10	1799929	.	ATT	A	699.28	PASS	AB=0.917;AC=5;AF=0.089;AN=56;BaseQRankSum=4.341;DP=595;FS=9.125;HRun=12;HaplotypeScore=77.8779;InbreedingCoeff=0.8060;MQ=52.89;MQ0=13;MQRankSum=2.094;QD=10.60;ReadPosRankSum=2.078;VQSLOD=1.6274;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,28:33:45.08:453,45,0	0/1:9,1:11:3.49:3,0,270	0/0:15,0:7:20.56:0,21,266	0/0:16,0:4:7.79:0,8,105	0/0:26,0:29:73.13:0,73,912	0/0:8,0:8:21.07:0,21,313	0/0:16,0:16:36.54:0,37,488	0/0:9,0:22:42.80:0,43,165	0/0:21,0:20:45.14:0,45,642	0/0:33,0:33:75.21:0,75,1015	0/0:11,0:12:27.09:0,27,387	0/0:17,0:16:26.99:0,27,345	0/0:17,0:19:50.59:0,51,641	0/0:23,0:23:56.95:0,57,650	0/0:14,0:14:26.88:0,27,384	0/0:24,0:24:57.08:0,57,757	1/1:5,17:21:36.05:366,36,0	0/0:17,0:16:39.10:0,39,546	0/0:23,0:17:42.14:0,42,620	0/0:38,0:41:90.22:0,90,1196	0/0:30,0:29:67.88:0,68,869	0/0:12,0:15:33.01:0,33,397	0/0:22,0:22:60.14:0,60,832	0/0:17,0:18:41.61:0,42,569	0/0:24,0:24:60.18:0,60,858	0/0:24,0:24:54.16:0,54,766	0/0:22,0:23:39.02:0,39,509	0/0:9,0:10:24.07:0,24,341
chr10	1802264	.	T	TAA	1443.28	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-1.080;DP=333;FS=8.185;HRun=11;HaplotypeScore=39.7529;InbreedingCoeff=0.8403;MQ=61.24;MQ0=13;MQRankSum=-3.239;QD=17.18;ReadPosRankSum=0.194;VQSLOD=1.0089;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:16:42.06:0,42,407	0/0:3,0:3:6.01:0,6,58	0/0:9,0:5:0.36:0,0,26	0/0:13,0:5:10.37:0,10,91	0/0:16,0:16:42.03:0,42,407	0/0:19,0:20:53.79:0,54,507	0/0:5,0:5:12.02:0,12,116	1/1:14,0:18:19.31:144,19,0	1/1:1,0:5:10.44:45,10,0	0/0:16,0:15:33.03:0,33,320	0/0:18,0:18:48.05:0,48,465	0/0:5,0:5:15.02:0,15,145	0/0:11,0:11:23.98:0,24,233	0/0:12,0:12:36.06:0,36,348	0/0:8,0:8:21.03:0,21,203	0/0:3,0:3:5.99:0,6,57	0/0:16,0:14:30:0,30,291	0/0:14,0:13:30.03:0,30,291	0/0:18,0:17:38.75:0,39,352	0/0:11,0:12:29.77:0,30,274	0/0:6,0:6:11.98:0,12,116	0/0:3,0:3:9.01:0,9,87	0/0:6,0:7:11.99:0,12,116	0/0:5,0:5:15.02:0,15,145	0/0:8,0:9:20.76:0,21,186	1/1:3,8:13:29.07:363,29,0	1/1:4,17:22:45.15:652,45,0	1/1:2,11:14:32.08:408,32,0
chr10	1803473	.	AC	A	11521.15	PASS	AB=0.556;AC=53;AF=0.981;AN=54;BaseQRankSum=1.291;DP=395;FS=4.725;HRun=1;HaplotypeScore=185.9848;InbreedingCoeff=-0.0236;MQ=42.82;MQ0=0;MQRankSum=-1.732;QD=29.24;ReadPosRankSum=1.267;VQSLOD=4.4945;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,8:7:18.06:247,18,0	1/1:0,8:7:18.06:251,18,0	0/1:1,4:2:7.27:36,0,7	./.	1/1:0,29:25:54.09:710,54,0	1/1:0,25:24:57.15:774,57,0	1/1:0,8:8:12.04:167,12,0	1/1:0,13:10:27.09:377,27,0	1/1:0,14:14:33.11:460,33,0	1/1:0,25:22:63.19:849,63,0	1/1:0,23:20:42.14:586,42,0	1/1:0,8:8:18.03:230,18,0	1/1:0,13:13:36.12:503,36,0	1/1:0,11:8:18.06:251,18,0	1/1:0,18:14:33.11:460,33,0	1/1:0,19:19:33.11:461,33,0	1/1:0,10:10:18.06:251,18,0	1/1:0,5:5:15.05:210,15,0	1/1:0,10:9:26.99:304,27,0	1/1:0,29:28:69.15:921,69,0	1/1:0,2:2:5.98:62,6,0	1/1:0,17:15:33.07:439,33,0	1/1:0,26:23:57.19:796,57,0	1/1:0,7:7:18.06:247,18,0	1/1:0,15:14:39.13:544,39,0	1/1:0,20:19:51.17:714,51,0	1/1:0,16:15:33.11:461,33,0	1/1:0,9:8:15.05:210,15,0
chr10	1803926	.	T	TGG	1206.93	PASS	AB=0.538;AC=5;AF=0.089;AN=56;BaseQRankSum=8.291;DP=574;FS=8.327;HRun=0;HaplotypeScore=80.3778;InbreedingCoeff=0.7670;MQ=57.33;MQ0=0;MQRankSum=-4.574;QD=38.93;ReadPosRankSum=1.416;VQSLOD=5.6728;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:72.23:0,72,1143	0/0:11,0:11:30.10:0,30,489	0/0:14,0:12:33.11:0,33,536	0/0:12,0:12:26.37:0,26,398	0/0:16,0:16:33.08:0,33,489	0/0:32,0:32:66.20:0,66,1026	0/0:15,0:15:39.13:0,39,636	0/0:44,0:44:99:0,123,1939	0/0:23,0:23:57.19:0,57,930	0/0:29,0:28:84.29:0,84,1369	0/0:30,0:30:66.21:0,66,1039	0/0:14,0:14:27.09:0,27,441	0/0:20,0:20:45.14:0,45,703	0/0:16,0:16:39.13:0,39,633	0/0:16,0:16:36.12:0,36,587	0/0:19,0:19:45.15:0,45,732	0/0:23,0:23:60.20:0,60,972	0/0:27,0:27:69.19:0,69,1091	0/0:14,0:13:36.09:0,36,518	0/0:27,0:26:72.25:0,72,1170	0/0:19,0:19:57.19:0,57,925	0/0:28,0:28:57.15:0,57,898	0/0:27,0:27:63.20:0,63,1002	0/0:17,0:17:48.16:0,48,783	0/0:20,0:20:51.13:0,51,803	0/1:2,12:11:18.86:454,0,19	1/1:0,13:12:36.12:660,36,0	1/1:0,4:4:12.04:218,12,0
chr10	1804619	.	A	ATCT	4079.89	PASS	AB=0.825;AC=15;AF=0.268;AN=56;BaseQRankSum=-7.136;DP=567;FS=5.462;HRun=0;HaplotypeScore=65.8611;InbreedingCoeff=0.7228;MQ=50.33;MQ0=16;MQRankSum=-7.506;QD=25.50;ReadPosRankSum=-1.198;VQSLOD=2.8578;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,11:15:21.03:394,21,0	0/0:9,1:9:18.06:0,18,283	0/0:31,0:11:33.11:0,33,540	0/0:19,0:6:18.06:0,18,292	0/0:36,0:36:81.28:0,81,1336	0/0:22,0:21:57.19:0,57,949	0/1:16,1:17:19.56:20,0,662	1/1:6,7:8:15.04:277,15,0	1/1:1,18:19:39.13:850,39,0	0/0:30,0:29:84.29:0,84,1399	0/0:25,0:25:63.21:0,63,1031	0/1:16,0:16:8.33:8,0,676	0/0:8,0:8:24.08:0,24,400	0/0:14,0:14:39.12:0,39,625	0/0:28,0:28:78.27:0,78,1293	0/0:16,0:15:27.18:0,27,729	1/1:3,7:9:18.06:407,18,0	0/0:14,0:14:24.08:0,24,400	0/0:17,0:11:27.09:0,27,448	0/0:26,0:26:72.25:0,72,1185	0/0:20,0:20:54.18:0,54,899	0/0:26,0:26:45.15:0,45,747	0/0:20,0:20:36.11:0,36,575	0/0:19,0:20:37.17:0,37,837	0/0:25,0:25:63.22:0,63,1046	0/1:3,23:18:57.85:702,0,58	1/1:2,33:32:51.18:1151,51,0	1/1:0,6:5:12.04:272,12,0
chr10	1804833	.	AT	A	245.98	PASS	AB=0.552;AC=1;AF=0.018;AN=56;BaseQRankSum=2.797;DP=613;FS=1.271;HRun=3;HaplotypeScore=60.4405;InbreedingCoeff=0.5130;MQ=56.45;MQ0=12;MQRankSum=2.546;QD=15.37;ReadPosRankSum=1.230;VQSLOD=3.1320;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:20:42.14:0,42,629	0/0:10,0:10:21.07:0,21,315	0/0:18,0:9:24.08:0,24,345	0/0:15,0:8:24.08:0,24,355	0/0:27,0:27:66.22:0,66,988	0/0:24,0:23:57.19:0,57,845	0/0:14,0:14:36.08:0,36,503	0/0:39,0:27:75.25:0,75,1124	0/1:3,13:16:2.46:320,0,2	0/0:29,0:28:84.25:0,84,1202	0/0:28,0:28:66.18:0,66,976	0/0:18,0:18:45.11:0,45,650	0/0:18,0:18:51.17:0,51,762	0/0:22,0:22:60.20:0,60,899	0/0:22,0:22:60.20:0,60,900	0/0:16,0:16:45.15:0,45,675	0/0:32,0:30:66.22:0,66,980	0/0:24,0:24:57.19:0,57,838	0/0:21,0:16:45.15:0,45,674	0/0:31,0:30:78.23:0,78,1144	0/0:16,0:16:42.14:0,42,628	0/0:20,0:20:57.19:0,57,844	0/0:24,0:24:72.24:0,72,1058	0/0:19,0:19:42.14:0,42,627	0/0:17,0:16:48.16:0,48,719	0/0:27,0:26:69.23:0,69,1016	0/0:33,0:33:81.15:0,81,1170	0/0:12,0:12:33.11:0,33,495
chr10	1805220	.	GCA	G	1603.89	PASS	AB=0.525;AC=3;AF=0.054;AN=56;BaseQRankSum=7.964;DP=676;FS=0.000;HRun=0;HaplotypeScore=76.1022;InbreedingCoeff=0.8180;MQ=55.44;MQ0=18;MQRankSum=-2.997;QD=33.41;ReadPosRankSum=-1.519;VQSLOD=4.9478;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:49:99:0,141,2635	0/0:11,0:10:24.08:0,24,463	0/0:27,0:5:15.01:0,15,227	0/0:25,0:5:15.03:0,15,249	0/0:35,0:35:65.96:0,66,1205	0/0:17,0:17:48.16:0,48,918	0/0:16,0:16:39.13:0,39,744	1/1:1,26:23:63.20:940,63,0	0/1:2,19:21:0.60:770,0,1	0/0:32,0:31:81.13:0,81,1561	0/0:20,0:20:45.14:0,45,817	0/0:21,0:21:63.22:0,63,1216	0/0:24,0:24:72.25:0,72,1383	0/0:15,0:15:45.14:0,45,813	0/0:30,0:30:90.29:0,90,1688	0/0:20,0:20:54.19:0,54,1033	0/0:29,0:29:84.27:0,84,1568	0/0:18,0:18:51.17:0,51,984	0/0:30,0:24:66.18:0,66,1193	0/0:27,0:27:69.24:0,69,1312	0/0:30,0:30:90.31:0,90,1738	0/0:26,0:26:72.21:0,72,1322	0/0:12,0:12:29.88:0,30,578	0/0:37,0:37:99:0,105,1941	0/0:19,0:19:48.16:0,48,927	0/0:11,0:10:30.09:0,30,549	0/0:36,0:36:99:0,105,2018	0/0:10,0:10:30.10:0,30,579
chr10	1806321	.	CTACAGTG	C	2503.71	PASS	AB=0.667;AC=5;AF=0.089;AN=56;BaseQRankSum=9.131;DP=548;FS=2.227;HRun=0;HaplotypeScore=116.7575;InbreedingCoeff=0.7054;MQ=54.09;MQ0=16;MQRankSum=-7.603;QD=56.90;ReadPosRankSum=0.558;VQSLOD=3.4797;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,147,5667	0/0:11,0:11:30.10:0,30,1198	0/0:13,0:3:9.03:0,9,346	0/0:17,0:1:3.01:0,3,85	0/0:31,0:30:90.31:0,90,3510	0/0:26,0:26:78.25:0,78,2925	0/0:21,0:21:57.18:0,57,2130	0/0:32,0:24:72.24:0,72,2667	0/0:17,0:17:48.16:0,48,1796	0/0:19,0:19:57.20:0,57,2239	0/0:16,0:16:48.16:0,48,1733	0/0:14,0:14:39.13:0,39,1559	0/0:9,0:9:27.09:0,27,1033	0/0:12,0:12:36.12:0,36,1423	0/0:20,0:19:51.65:0,52,1998	0/0:10,0:10:30.10:0,30,1165	0/0:23,0:23:69.19:0,69,2573	0/0:18,0:18:48.16:0,48,1782	0/0:21,0:21:60.21:0,60,2329	0/0:23,0:23:66.23:0,66,2499	0/0:19,0:18:51.18:0,51,2001	0/0:14,0:13:39.08:0,39,1364	0/0:22,0:22:57.20:0,57,2237	0/0:23,0:23:60.21:0,60,2216	0/0:22,0:21:63.22:0,63,2482	1/1:3,17:20:51.16:1243,51,0	1/1:1,17:18:45.14:1168,45,0	0/1:3,3:6:99:222,0,102
chr10	1808494	.	G	GT	628.32	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-3.804;DP=577;FS=0.000;HRun=7;HaplotypeScore=60.7592;InbreedingCoeff=0.9398;MQ=68.41;MQ0=4;MQRankSum=1.163;QD=25.13;ReadPosRankSum=0.959;VQSLOD=4.0355;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,108,1042	0/0:4,0:4:9.01:0,9,87	0/0:21,0:18:36.85:0,37,337	0/0:33,0:19:26.51:0,27,238	0/0:20,0:20:60.10:0,60,579	0/0:15,0:15:33.05:0,33,319	0/0:12,0:12:30.04:0,30,290	0/0:28,0:28:57.06:0,57,544	1/1:1,24:25:60.18:723,60,0	0/0:23,0:23:63.10:0,63,608	0/0:20,0:20:44.13:0,44,425	0/0:20,0:20:42.04:0,42,400	0/0:13,0:13:30.03:0,30,283	0/0:14,0:14:39.05:0,39,372	0/0:22,0:22:57.07:0,57,545	0/0:23,0:23:63.10:0,63,608	0/0:11,0:11:27.03:0,27,261	0/0:10,0:10:23.98:0,24,223	0/0:19,0:16:42.07:0,42,405	0/0:28,0:28:72.11:0,72,694	0/0:28,0:28:68.69:0,69,666	0/0:24,0:24:63.09:0,63,607	0/0:15,0:15:39.06:0,39,376	0/0:18,0:18:45.07:0,45,434	0/0:19,0:19:48.08:0,48,464	0/0:20,0:19:54.05:0,54,513	0/0:31,0:29:71.94:0,72,680	0/0:20,0:20:57.09:0,57,550
chr10	1808635	.	TC	T	1672	PASS	AC=10;AF=0.192;AN=52;BaseQRankSum=7.706;DP=350;FS=9.271;HRun=6;HaplotypeScore=44.8715;InbreedingCoeff=0.9261;MQ=49.53;MQ0=21;MQRankSum=-0.576;QD=19.67;ReadPosRankSum=2.330;VQSLOD=2.3109;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,25:22:51.13:548,51,0	0/0:4,0:3:9.03:0,9,113	./.	./.	0/0:15,0:15:42.14:0,42,551	0/0:11,0:10:21.07:0,21,276	0/0:12,0:11:24.05:0,24,275	0/0:16,0:6:8.97:0,9,71	0/0:16,0:16:42.13:0,42,536	0/0:15,0:11:27:0,27,327	0/0:17,0:17:39.12:0,39,501	0/0:17,0:16:42.12:0,42,538	0/0:10,0:10:30.05:0,30,375	0/0:14,0:14:35.88:0,36,473	0/0:12,0:11:24.06:0,24,301	0/0:11,0:11:30.07:0,30,368	1/1:1,9:9:18.04:193,18,0	0/0:7,0:5:12.04:0,12,158	0/0:6,0:4:12:0,12,127	0/0:21,0:21:60.15:0,60,768	0/0:17,0:17:42.12:0,42,537	0/0:17,0:17:45.15:0,45,591	0/0:8,0:8:21.06:0,21,262	0/0:6,0:6:18.06:0,18,237	0/0:8,0:8:24.08:0,24,316	1/1:2,17:14:36.09:387,36,0	1/1:2,26:25:60.14:645,60,0	1/1:1,2:2:6.02:64,6,0
chr10	1810395	.	GTTT	G	480.79	PASS	AC=2;AF=0.038;AN=52;BaseQRankSum=5.741;DP=623;FS=15.900;HRun=8;HaplotypeScore=75.9282;InbreedingCoeff=0.7845;MQ=46.79;MQ0=41;MQRankSum=-5.849;QD=18.49;ReadPosRankSum=-2.210;VQSLOD=-0.1748;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:32:63.22:0,63,1326	0/0:19,0:18:42.14:0,42,852	./.	./.	0/0:31,0:27:60.21:0,60,1273	0/0:22,0:22:45.14:0,45,929	0/0:18,0:14:33.08:0,33,621	1/1:13,13:17:39.12:575,39,0	0/0:17,0:15:15.05:0,15,327	0/0:22,0:17:45.15:0,45,975	0/0:28,0:26:54.11:0,54,1052	0/0:23,0:21:29.90:0,30,654	0/0:21,0:18:42.14:0,42,916	0/0:20,0:17:27.09:0,27,589	0/0:21,0:21:51.18:0,51,1087	0/0:16,0:14:33.11:0,33,720	0/0:40,0:32:66.21:0,66,1390	0/0:25,1:21:0.61:0,1,872	0/0:26,0:18:42.14:0,42,910	0/0:28,0:22:42.14:0,42,890	0/0:22,0:16:33.03:0,33,603	0/0:22,0:21:48.16:0,48,1000	0/0:35,0:31:72.17:0,72,1457	0/0:24,0:23:39.61:0,40,852	0/0:17,0:16:36.12:0,36,786	0/0:24,0:19:54.18:0,54,1129	0/0:23,0:19:51.17:0,51,1094	0/0:14,0:9:18.06:0,18,364
chr10	1810872	.	C	CT	2346.76	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=6.266;DP=521;FS=1.681;HRun=2;HaplotypeScore=48.8329;InbreedingCoeff=0.9491;MQ=49.58;MQ0=7;MQRankSum=-11.634;QD=23.01;ReadPosRankSum=-0.940;VQSLOD=3.1640;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,13:12:29.97:378,30,0	0/0:7,0:7:18.06:0,18,223	0/0:18,0:11:33.03:0,33,374	0/0:17,0:8:24.03:0,24,272	0/0:34,0:34:78.23:0,78,954	0/0:19,0:19:54.16:0,54,657	0/0:19,1:19:48.15:0,48,595	1/1:4,9:5:12.01:132,12,0	1/1:5,5:10:9:107,9,0	0/0:21,0:21:57.14:0,57,681	0/0:23,1:23:54.16:0,54,658	0/0:22,0:22:60.19:0,60,743	0/0:14,0:14:36.11:0,36,445	0/0:17,0:17:45.14:0,45,558	0/0:16,0:16:27.08:0,27,335	0/0:10,0:9:27.08:0,27,335	1/1:1,7:8:18.06:258,18,0	0/0:18,0:18:45.14:0,45,558	0/0:30,0:23:66.17:0,66,791	0/0:34,0:34:96.26:0,96,1173	0/0:19,0:19:48.15:0,48,595	0/0:16,0:16:33.09:0,33,396	0/0:20,0:20:45.14:0,45,558	0/0:24,0:24:39.12:0,39,483	0/0:19,0:19:48.05:0,48,595	1/1:2,17:17:4.76:523,5,0	1/1:4,26:30:69.19:963,69,0	1/1:0,8:5:12.04:172,12,0
chr10	1811486	.	G	GA	354.98	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=-1.823;DP=636;FS=2.060;HRun=6;HaplotypeScore=69.1961;InbreedingCoeff=0.7691;MQ=75.47;MQ0=3;MQRankSum=1.448;QD=6.83;ReadPosRankSum=-0.215;VQSLOD=-0.2041;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,111,1118	0/0:10,0:10:27:0,27,244	0/0:37,0:25:21.34:0,21,421	0/1:27,0:21:0.29:0,0,219	0/0:32,0:32:96.15:0,96,954	0/0:36,0:36:99:0,105,1041	0/0:15,0:15:42.08:0,42,420	0/0:25,0:25:54.04:0,54,517	1/1:4,21:25:36.11:449,36,0	0/0:30,0:30:81.17:0,81,821	0/0:29,0:29:76.05:0,76,763	0/0:15,0:15:45.09:0,45,452	0/0:18,0:18:47.58:0,48,461	0/0:24,0:24:56.99:0,57,553	0/0:38,0:38:99:0,102,1026	0/0:16,0:16:45.09:0,45,452	0/0:17,0:17:48.09:0,48,480	0/0:5,0:5:15.03:0,15,153	0/0:18,0:17:42.05:0,42,413	0/0:30,0:30:87.11:0,87,845	0/0:21,0:21:51.11:0,51,519	0/0:20,0:20:48.06:0,48,467	0/0:26,0:26:72.11:0,72,718	0/0:11,0:11:33.07:0,33,330	0/0:19,0:19:54.08:0,54,528	0/0:17,0:17:51.12:0,51,520	0/0:25,0:25:72.09:0,72,707	0/0:9,0:9:21.02:0,21,202
chr10	1811881	.	A	ATTTT	2867.77	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=4.803;DP=707;FS=2.511;HRun=5;HaplotypeScore=130.6659;InbreedingCoeff=0.9852;MQ=61.36;MQ0=4;MQRankSum=-3.232;QD=26.55;ReadPosRankSum=-2.073;VQSLOD=-0.3336;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:48.64:0,49,536	0/0:16,0:16:45.13:0,45,726	0/0:33,0:25:30.87:0,31,579	0/0:25,0:16:20.72:0,21,527	0/0:30,0:30:84.16:0,84,1215	0/0:29,0:29:87.27:0,87,1396	0/0:21,0:21:51.03:0,51,692	1/1:4,19:24:63.05:1000,63,0	1/1:2,0:20:39.12:494,39,0	0/0:25,0:25:72.22:0,72,1137	0/0:31,0:31:84.13:0,84,1290	0/0:21,0:21:60.12:0,60,881	0/0:23,0:23:60.16:0,60,945	0/0:15,0:15:42.09:0,42,625	0/0:21,0:21:63.15:0,63,951	0/0:20,0:20:54.12:0,54,804	0/0:36,0:35:99:0,100,558	0/0:19,0:19:47.03:0,47,708	0/0:21,0:21:57.16:0,57,902	0/0:34,0:34:99:0,99,1524	0/0:18,0:18:51.08:0,51,744	0/0:29,0:29:78.19:0,78,1197	0/0:20,0:20:60.15:0,60,922	0/0:35,0:35:96.67:0,97,1432	0/0:31,0:31:81.20:0,81,1254	1/1:2,0:21:57.10:674,57,0	1/1:5,0:33:59.07:758,59,0	1/1:2,0:9:9.03:114,9,0
chr10	1811886	.	TG	T	3117.29	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.455;DP=701;FS=3.090;HRun=1;HaplotypeScore=82.3025;InbreedingCoeff=0.9594;MQ=61.24;MQ0=4;MQRankSum=-1.845;QD=36.25;ReadPosRankSum=0.689;VQSLOD=3.9895;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,46:47:99:1748,121,0	0/0:15,0:15:45.15:0,45,658	0/0:32,0:25:46.13:0,46,673	0/0:25,1:17:36.40:0,36,598	0/0:32,0:32:93.21:0,93,1269	0/0:31,0:31:93.28:0,93,1318	0/0:21,0:21:60.14:0,60,788	0/0:18,0:17:45.47:0,45,260	0/0:18,0:18:23.51:0,24,133	0/0:27,0:27:81.26:0,81,1146	0/0:30,0:30:90.17:0,90,1247	0/0:21,0:21:63.15:0,63,854	0/0:22,0:22:66.22:0,66,959	0/0:15,0:15:45.12:0,45,614	0/0:21,0:21:63.21:0,63,918	0/0:19,0:19:57.19:0,57,830	1/1:5,34:39:99:1491,114,0	0/0:20,0:20:38.07:0,38,734	0/0:25,0:25:75.07:0,75,977	0/0:36,0:36:99:0,108,1456	0/0:18,0:18:54.11:0,54,757	0/0:30,0:30:90.21:0,90,1228	0/0:21,0:21:60.20:0,60,871	0/0:34,0:34:99:0,99,1368	0/0:28,0:28:84.28:0,84,1225	0/0:22,0:22:57.27:0,57,272	0/0:26,0:26:37.04:0,37,162	0/0:7,0:7:7.49:0,7,26
chr10	1812340	.	G	GAA	9328.87	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-15.897;DP=677;FS=3.728;HRun=3;HaplotypeScore=75.7975;InbreedingCoeff=0.9992;MQ=91.97;MQ0=0;MQRankSum=-1.860;QD=45.29;ReadPosRankSum=1.673;VQSLOD=4.2674;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,41:45:99:2088,114,0	0/0:11,0:11:33.09:0,33,441	0/0:34,0:32:78.28:0,78,1017	0/0:28,0:28:57.20:0,57,731	0/0:30,0:30:87.25:0,87,1163	0/0:19,0:19:54.12:0,54,715	0/0:19,0:19:57.16:0,57,762	1/1:6,31:37:93.24:1509,93,0	1/1:0,21:21:54.19:989,54,0	0/0:29,0:29:80.84:0,81,1072	0/0:18,0:18:54.16:0,54,736	0/0:20,0:20:57.19:0,57,797	0/0:22,0:22:63.20:0,63,863	0/0:19,0:19:57.18:0,57,779	0/0:24,0:24:69.20:0,69,930	0/0:12,0:12:36.12:0,36,503	1/1:1,22:24:57.20:1044,57,0	0/0:12,0:12:36.07:0,36,464	0/0:24,0:24:72.17:0,72,908	0/0:32,0:32:84.27:0,84,1156	0/0:38,0:38:99:0,114,1552	0/0:21,0:21:54.18:0,54,754	0/0:16,0:16:42.11:0,42,553	0/0:23,0:23:66.17:0,66,869	0/0:20,0:20:57.18:0,57,779	1/1:2,32:35:60.32:1610,60,0	1/1:1,36:37:93.32:1704,93,0	1/1:0,7:7:21.07:385,21,0
chr10	1813573	.	GA	G	4289.97	PASS	AB=1.000;AC=13;AF=0.241;AN=54;BaseQRankSum=12.960;DP=479;FS=16.575;HRun=7;HaplotypeScore=48.9248;InbreedingCoeff=0.8943;MQ=74.03;MQ0=3;MQRankSum=-0.516;QD=22.23;ReadPosRankSum=1.486;VQSLOD=3.2337;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,31:31:81.18:826,81,0	0/0:6,0:6:18.06:0,18,226	0/1:32,0:20:14:14,0,163	0/0:17,0:7:12.95:0,13,124	0/0:15,0:15:39.10:0,39,460	0/0:14,0:14:42.12:0,42,515	0/0:10,0:10:30.09:0,30,366	1/1:4,28:31:80.82:818,81,0	1/1:1,17:18:51.12:520,51,0	0/0:18,0:18:48.15:0,48,604	0/0:13,0:13:39.10:0,39,476	0/0:10,0:10:30.08:0,30,364	0/0:18,0:18:54.16:0,54,665	0/0:20,0:20:54.17:0,54,679	0/0:16,0:16:45.14:0,45,566	0/0:15,0:15:36.12:0,36,453	1/1:4,28:32:75.17:765,75,0	0/0:18,0:18:51.16:0,51,642	0/0:13,0:13:36.11:0,36,442	0/0:14,0:14:36.12:0,36,453	0/0:6,0:6:18.06:0,18,226	0/0:12,0:12:27.09:0,27,340	0/0:18,0:18:48.15:0,48,593	0/0:13,0:13:33.11:0,33,415	0/0:19,0:19:54.17:0,54,679	1/1:1,21:22:60.13:612,60,0	1/1:1,25:26:72.16:735,72,0	./.
chr10	1814859	.	C	CT	912.06	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-8.707;DP=484;FS=0.766;HRun=6;HaplotypeScore=49.5992;InbreedingCoeff=0.9827;MQ=76.03;MQ0=0;MQRankSum=-1.754;QD=29.42;ReadPosRankSum=-4.714;VQSLOD=1.9674;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:81.18:0,81,826	0/0:10,0:10:30.07:0,30,306	0/0:10,0:9:21.03:0,21,206	0/0:10,0:10:24.45:0,24,220	0/0:23,0:23:66.13:0,66,666	0/0:15,0:15:45.09:0,45,452	0/0:9,0:9:27.05:0,27,269	1/1:3,28:31:81.25:1007,81,0	0/0:14,0:14:36.08:0,36,367	0/0:16,0:16:45.10:0,45,455	0/0:28,0:28:84.15:0,84,841	0/0:12,0:12:33.07:0,33,337	0/0:20,0:20:54.11:0,54,544	0/0:10,0:10:24.05:0,24,245	0/0:8,0:8:24.04:0,24,238	0/0:12,0:12:33.06:0,33,330	0/0:32,0:32:93.19:0,93,941	0/0:18,0:18:45.08:0,45,452	0/0:26,0:26:60.09:0,60,594	0/0:23,0:23:57.13:0,57,580	0/0:8,0:8:24.05:0,24,245	0/0:16,0:16:45.10:0,45,459	0/0:12,0:12:33.08:0,33,337	0/0:11,0:11:30.03:0,30,295	0/0:27,0:27:78.15:0,78,783	0/0:29,0:29:78.18:0,78,796	0/0:9,0:9:24.05:0,24,245	0/0:10,0:10:30.07:0,30,306
chr10	1815000	.	C	CG	893.95	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-3.664;DP=386;FS=11.380;HRun=2;HaplotypeScore=56.4243;InbreedingCoeff=0.7314;MQ=55.91;MQ0=22;MQRankSum=2.625;QD=17.53;ReadPosRankSum=1.637;VQSLOD=2.4593;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,20:23:39.05:506,39,0	0/0:7,0:7:17.99:0,18,200	0/0:16,0:4:2.95:0,3,25	0/0:11,0:4:4.36:0,4,39	0/0:13,0:13:27.46:0,27,288	0/0:12,0:10:22.93:0,23,222	0/0:21,0:18:47.81:0,48,455	0/0:29,0:26:56.53:0,57,458	0/0:11,0:10:23.97:0,24,204	0/0:13,0:12:26.88:0,27,236	0/0:9,0:9:23.97:0,24,247	0/0:11,0:10:26.96:0,27,252	0/0:7,0:7:12.02:0,12,126	0/0:5,0:5:12.01:0,12,123	0/0:8,0:8:12.51:0,13,147	0/0:8,0:8:24.03:0,24,258	1/1:8,19:26:39.68:508,40,0	0/0:17,0:16:45.01:0,45,477	0/0:16,0:15:25.72:0,26,345	0/0:24,0:24:62.73:0,63,588	0/0:8,0:7:18:0,18,182	0/0:5,0:2:6.02:0,6,73	0/0:13,0:12:15.84:0,16,144	0/0:13,0:13:27.03:0,27,290	0/0:11,0:11:18.01:0,18,202	0/0:21,0:20:29.07:0,29,211	0/0:21,0:21:36.23:0,36,258	0/0:4,0:3:5.68:0,6,23
chr10	1815372	.	TCCAATGCG	T	8757.21	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=14.355;DP=465;FS=13.666;HRun=0;HaplotypeScore=121.0730;InbreedingCoeff=0.9662;MQ=80.59;MQ0=0;MQRankSum=-13.102;QD=65.35;ReadPosRankSum=1.521;VQSLOD=3.8560;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,28:28:45.11:1151,45,0	0/0:7,0:7:21.07:0,21,972	0/0:19,0:19:57.20:0,57,2260	0/0:13,0:13:24.46:0,24,1196	0/0:25,0:25:75.26:0,75,2925	0/0:18,0:18:54.19:0,54,2472	0/0:17,0:17:51.18:0,51,2221	1/1:0,16:16:45.13:1157,45,0	1/1:0,19:19:54.19:1634,54,0	0/0:17,0:17:48.15:0,48,2049	0/0:10,0:10:30.10:0,30,1257	0/0:11,0:11:33.11:0,33,1409	0/0:12,0:12:36.12:0,36,1474	0/0:18,0:18:54.19:0,54,2339	0/0:11,0:11:33.11:0,33,1402	0/0:19,0:19:57.20:0,57,2515	1/1:0,20:20:45.15:1284,45,0	0/0:19,0:19:57.20:0,57,2537	0/0:18,0:18:51.18:0,51,2304	0/0:18,0:18:54.19:0,54,2484	0/0:23,0:23:69.24:0,69,3103	0/0:11,0:11:33.11:0,33,1437	0/0:11,0:11:30.10:0,30,1322	0/0:24,0:24:72.25:0,72,3149	0/0:10,0:10:30.10:0,30,1311	1/1:0,22:22:66.23:1954,66,0	1/1:0,27:27:51.64:1485,52,0	1/1:0,2:2:3.01:91,3,0
chr10	1815710	.	TAC	T	56.09	PASS	AB=0.890;AC=8;AF=0.148;AN=54;BaseQRankSum=2.394;DP=255;FS=8.926;HRun=0;HaplotypeScore=39.7148;InbreedingCoeff=0.0704;MQ=65.01;MQ0=9;MQRankSum=0.834;QD=0.93;ReadPosRankSum=-0.013;VQSLOD=-0.0734;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:7:2.04:0,2,6	0/1:2,0:2:27.83:28,0,40	1/1:20,1:13:1.25:3,1,0	0/0:18,0:10:3.01:0,3,41	0/0:8,0:8:12.04:0,12,183	0/0:9,0:9:12.02:0,12,160	0/0:5,0:5:6.02:0,6,91	0/0:33,0:31:18.40:0,18,176	1/1:4,0:4:0.89:2,1,0	0/0:6,0:6:12.04:0,12,184	0/0:4,0:4:6.02:0,6,92	0/1:2,2:4:36.91:59,0,37	0/0:10,0:10:15.05:0,15,223	0/0:5,0:5:6.02:0,6,91	0/0:8,0:8:18.06:0,18,268	0/0:5,0:5:12.04:0,12,181	0/1:12,0:12:4.85:7,0,5	0/1:15,2:16:62.27:62,0,398	0/0:19,0:15:27.07:0,27,387	0/0:5,0:5:6.48:0,6,71	0/0:11,0:11:9.03:0,9,133	./.	0/0:8,0:7:9.03:0,9,130	0/0:7,0:7:5.98:0,6,92	0/0:4,0:5:12.02:0,12,141	0/0:4,0:3:2.97:0,3,20	0/0:12,0:10:3.01:0,3,35	0/0:3,0:3:3.01:0,3,34
chr10	1815744	.	A	AAT	452.49	PASS	AC=12;AF=0.240;AN=50;BaseQRankSum=5.769;DP=200;FS=0.000;HRun=0;HaplotypeScore=33.6355;InbreedingCoeff=0.6923;MQ=51.39;MQ0=9;MQRankSum=-5.557;QD=9.23;ReadPosRankSum=-1.504;VQSLOD=2.0961;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,0:2:5.87:35,6,0	0/0:5,0:5:12:0,12,138	0/0:15,0:3:6.02:0,6,68	./.	0/0:7,0:7:15.01:0,15,177	0/0:10,0:10:24.08:0,24,306	0/0:2,0:2:3.01:0,3,39	1/1:23,0:20:29.73:212,30,0	./.	0/0:7,0:7:11.99:0,12,138	0/0:3,0:2:3.01:0,3,39	0/0:3,0:3:9.02:0,9,105	0/0:5,0:5:6.02:0,6,78	0/0:3,0:3:3.01:0,3,39	0/0:5,0:5:9.02:0,9,103	0/0:5,0:5:9.02:0,9,106	1/1:2,0:11:14.62:86,15,0	0/0:19,0:18:51.16:0,51,653	0/0:18,0:15:33.08:0,33,404	0/0:7,0:7:15.04:0,15,184	0/0:8,0:8:21.05:0,21,249	./.	0/0:6,0:6:9.02:0,9,103	0/0:6,0:6:11.87:0,12,157	0/0:7,0:7:20.27:0,20,231	1/1:0,2:2:6.02:96,6,0	1/1:0,5:5:9.03:127,9,0	1/1:3,2:3:3.01:51,3,0
chr10	1816654	.	C	CCTCTCTCT	1020.59	PASS	AB=1.000;AC=11;AF=0.204;AN=54;BaseQRankSum=2.164;DP=499;FS=1.103;HRun=0;HaplotypeScore=141.2415;InbreedingCoeff=0.6978;MQ=61.41;MQ0=20;MQRankSum=-2.654;QD=10.21;ReadPosRankSum=-2.518;VQSLOD=2.3729;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:18:8.99:165,9,0	0/0:8,0:8:9.03:0,9,198	./.	0/0:32,0:21:5.50:0,6,49	0/0:11,0:11:9.03:0,9,220	0/0:17,0:16:15.05:0,15,339	0/0:25,0:24:16.88:0,17,346	0/0:25,0:23:1.25:0,1,3	1/1:16,0:19:7.52:47,8,0	0/0:16,0:15:15.52:0,16,331	0/0:23,0:22:27.09:0,27,575	0/0:14,0:14:18.40:0,18,397	0/0:15,0:16:26.98:0,27,591	0/0:15,0:14:21.04:0,21,431	0/0:25,0:25:51.07:0,51,1150	0/0:20,0:19:42.14:0,42,1042	1/1:12,0:11:9.92:249,10,0	0/0:13,0:13:10.01:0,10,439	0/0:15,0:15:9.03:0,9,191	0/0:12,0:12:9.03:0,9,225	0/0:30,0:30:41.48:0,41,850	0/0:9,0:8:6.02:0,6,150	0/0:21,0:20:30.04:0,30,568	0/0:18,0:17:29.64:0,30,524	0/0:15,0:15:12.04:0,12,281	1/1:14,0:16:21.03:498,21,0	1/1:16,10:25:7.24:204,7,0	0/1:6,0:6:12.09:15,0,12
chr10	1816686	.	TCACACACACACACACA	T	175.89	PASS	AB=0.791;AC=2;AF=0.036;AN=56;BaseQRankSum=2.116;DP=499;FS=0.000;HRun=0;HaplotypeScore=209.7635;InbreedingCoeff=0.1875;MQ=49.27;MQ0=19;MQRankSum=-2.197;QD=6.07;ReadPosRankSum=0.510;VQSLOD=2.3974;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:13,2:14:0:0,0,0	0/0:7,0:7:9.03:0,9,634	0/0:3,0:1:3.01:0,3,202	0/0:10,0:6:9.03:0,9,375	0/0:15,0:15:18.06:0,18,1139	0/0:29,0:28:54.19:0,54,3378	0/0:21,0:20:20.56:0,21,1204	0/0:9,0:8:21.07:0,21,1027	0/0:23,0:22:42.14:0,42,2090	0/0:19,0:18:42.14:0,42,2601	0/0:21,0:20:26.88:0,27,1560	0/0:15,0:15:26.85:0,27,1560	0/0:19,0:19:43.50:0,44,2521	0/0:24,0:22:45.15:0,45,2623	0/0:29,0:29:63.08:0,63,4108	0/0:23,0:22:48.12:0,48,2447	0/1:8,6:12:47.55:250,0,48	0/0:16,0:16:30.28:0,30,1565	0/0:15,0:15:27.04:0,27,1310	0/0:15,0:15:30.09:0,30,1780	0/0:28,0:28:57.09:0,57,3293	0/0:9,0:8:8.89:0,9,503	0/0:24,0:23:15.05:0,15,721	0/0:27,0:25:45.15:0,45,3123	0/0:22,0:21:36.12:0,36,2269	0/0:18,0:16:39.13:0,39,2055	0/0:25,0:24:27.56:0,28,1329	0/0:4,0:4:9.03:0,9,502
chr10	1816795	.	AC	A	2390.39	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.915;DP=678;FS=7.838;HRun=1;HaplotypeScore=75.3236;InbreedingCoeff=0.9978;MQ=66.58;MQ0=4;MQRankSum=0.101;QD=35.68;ReadPosRankSum=2.111;VQSLOD=3.7082;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:51.17:0,51,810	0/0:7,0:7:21.07:0,21,336	0/0:34,0:24:63.20:0,63,917	0/0:27,0:16:31.74:0,32,437	0/0:29,0:29:81.27:0,81,1269	0/0:18,0:18:54.17:0,54,828	0/0:15,0:15:45.15:0,45,709	0/0:33,0:33:99:0,99,1512	0/0:28,0:28:81.26:0,81,1268	0/0:38,0:38:99:0,114,1763	0/0:28,0:28:81.28:0,81,1284	0/0:25,0:25:75.25:0,75,1169	0/0:26,0:26:78.26:0,78,1214	0/0:20,0:20:60.20:0,60,954	0/0:29,0:29:87.30:0,87,1360	0/0:24,0:24:72.23:0,72,1109	0/0:12,0:12:30.10:0,30,477	0/0:12,0:12:30.10:0,30,457	0/0:24,0:24:72.24:0,72,1109	0/0:36,0:36:99:0,105,1653	0/0:36,0:36:99:0,108,1693	0/0:10,0:10:30.10:0,30,479	0/0:21,0:21:57.17:0,57,865	0/0:17,0:17:42.14:0,42,671	0/0:39,0:39:99:0,105,1666	1/1:1,21:22:41.22:819,41,0	1/1:0,33:33:87.29:1210,87,0	1/1:0,12:12:36.12:504,36,0
chr10	1817479	.	C	CCG	9297.54	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-16.137;DP=617;FS=0.330;HRun=0;HaplotypeScore=68.2275;InbreedingCoeff=0.9766;MQ=86.09;MQ0=0;MQRankSum=-3.451;QD=52.53;ReadPosRankSum=2.122;VQSLOD=5.7177;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,42:43:99:2258,117,0	0/0:8,0:8:24.08:0,24,368	0/0:17,0:17:48.13:0,48,671	0/0:23,0:23:69.16:0,69,960	0/0:36,0:36:99:0,102,1501	0/0:24,0:24:72.24:0,72,1096	0/0:23,0:23:69.20:0,69,1011	1/1:2,21:25:72.21:1288,72,0	1/1:1,24:25:66.23:1272,66,0	0/0:19,0:19:57.16:0,57,824	0/0:18,0:18:51.11:0,51,713	0/0:24,0:24:72.23:0,72,1074	0/0:16,0:16:48.16:0,48,734	0/0:21,0:21:60.20:0,60,919	0/0:27,0:27:81.25:0,81,1200	0/0:20,1:21:5.28:0,5,860	1/1:1,38:39:99:2143,111,0	0/0:19,0:19:57.16:0,57,847	0/0:18,0:18:54.15:0,54,777	0/0:28,0:28:84.27:0,84,1260	0/0:22,0:22:66.22:0,66,1008	0/0:26,0:26:78.26:0,78,1194	0/0:12,0:12:36.12:0,36,549	0/0:19,0:19:57.19:0,57,873	0/0:19,0:19:54.16:0,54,802	1/1:0,19:19:57.18:1067,57,0	1/1:1,17:19:48.16:922,48,0	1/1:0,7:7:18.06:347,18,0
chr10	1818032	.	C	CATTT	517.58	PASS	AC=6;AF=0.120;AN=50;BaseQRankSum=-1.143;DP=283;FS=11.851;HRun=0;HaplotypeScore=70.4329;InbreedingCoeff=0.4252;MQ=68.50;MQ0=0;MQRankSum=0.925;QD=12.04;ReadPosRankSum=-1.510;VQSLOD=1.3443;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:13:8.03:61,8,0	0/0:6,0:6:3.01:0,3,46	./.	./.	0/0:9,0:9:9.03:0,9,139	0/0:11,0:11:15.05:0,15,232	0/0:3,0:3:3.01:0,3,46	0/0:38,0:38:14.84:0,15,101	0/0:4,0:6:6.01:0,6,56	0/0:4,0:4:9.03:0,9,140	0/0:11,0:11:2.99:0,3,24	0/0:5,0:5:6.02:0,6,93	0/0:10,0:10:12.02:0,12,163	0/0:6,0:6:9.03:0,9,139	0/0:8,0:8:3.01:0,3,46	0/0:4,0:4:3.01:0,3,47	1/1:12,14:26:24.08:564,24,0	0/0:13,0:13:18.06:0,18,265	0/0:15,0:15:12.03:0,12,155	0/0:9,0:9:6.02:0,6,91	./.	1/1:4,0:4:0.47:1,0,0	0/0:5,0:5:3.01:0,3,46	0/0:6,0:6:3.01:0,3,46	0/0:9,0:9:12.04:0,12,186	0/0:22,0:22:33.04:0,33,308	0/0:14,0:14:18.02:0,18,168	0/0:12,0:12:12.01:0,12,112
chr10	1818049	.	AT	A	457.41	PASS	AC=6;AF=0.115;AN=52;BaseQRankSum=7.801;DP=208;FS=22.009;HRun=3;HaplotypeScore=45.1032;InbreedingCoeff=0.6482;MQ=56.63;MQ0=0;MQRankSum=-6.105;QD=12.71;ReadPosRankSum=3.979;VQSLOD=0.8130;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:27.08:0,27,365	0/0:3,0:3:9.03:0,9,128	./.	0/0:3,0:3:0.69:0,1,39	0/0:7,0:7:21.07:0,21,294	0/0:11,0:11:33.11:0,33,466	0/0:2,0:2:6.02:0,6,84	0/0:26,0:26:78.25:0,78,1082	0/0:4,0:4:6.96:0,7,85	0/0:4,0:4:9.03:0,9,130	0/0:7,0:7:18.06:0,18,250	0/0:2,0:2:6.02:0,6,86	0/0:9,0:9:24.08:0,24,338	0/0:5,0:5:15.05:0,15,213	0/0:8,0:8:21.06:0,21,274	0/0:1,0:1:3.01:0,3,43	0/0:24,0:24:54.06:0,54,598	0/0:16,0:16:45.15:0,45,640	0/0:9,0:9:27.09:0,27,384	0/0:3,0:3:9.03:0,9,127	./.	0/0:2,0:2:3.01:0,3,42	0/0:2,0:2:6.01:0,6,68	0/0:5,0:5:15.05:0,15,209	0/0:5,0:5:12.04:0,12,173	1/1:1,18:19:46.44:343,46,0	1/1:0,12:12:25.86:192,26,0	1/1:1,4:5:11.35:56,11,0
chr10	1818057	.	ATTTATTTATTTATTTATTATTTG	A	3611.27	PASS	AB=0.645;AC=3;AF=0.058;AN=52;BaseQRankSum=8.049;DP=201;FS=22.618;HRun=0;HaplotypeScore=132.3154;InbreedingCoeff=0.0848;MQ=54.70;MQ0=0;MQRankSum=-6.679;QD=95.03;ReadPosRankSum=4.041;VQSLOD=1.6671;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:27.06:0,27,1558	0/0:2,0:2:6.02:0,6,540	./.	0/0:3,0:3:7.83:0,8,161	0/0:6,0:6:18.05:0,18,1563	0/0:12,0:12:36.12:0,36,2817	0/0:3,0:3:9.03:0,9,550	0/0:28,0:28:83.77:0,84,4774	0/0:4,0:4:11.99:0,12,619	0/0:3,0:3:9.03:0,9,1002	0/0:4,0:4:12.04:0,12,662	0/0:2,0:2:6.02:0,6,667	0/0:8,0:8:24.08:0,24,1908	0/0:4,0:4:12.03:0,12,1002	0/0:5,0:5:15.02:0,15,687	0/0:2,0:2:6.02:0,6,425	0/0:25,0:25:54.19:0,54,3787	0/0:17,0:17:51.18:0,51,4257	0/0:8,0:8:24.07:0,24,1854	0/0:2,0:2:6.02:0,6,667	./.	0/0:1,0:1:3.01:0,3,65	0/0:2,0:2:6.02:0,6,396	0/0:4,0:4:12.04:0,12,898	0/0:6,0:6:18.06:0,18,1519	0/1:8,11:19:16.08:1890,0,16	0/1:6,6:12:22.77:1043,0,23	0/1:3,4:7:0.51:679,0,1
chr10	1818311	.	TAGAGAGTAAC	T	1386.80	PASS	AB=0.806;AC=6;AF=0.107;AN=56;BaseQRankSum=3.910;DP=407;FS=16.531;HRun=0;HaplotypeScore=138.7260;InbreedingCoeff=-0.1251;MQ=75.48;MQ0=1;MQRankSum=-4.506;QD=16.51;ReadPosRankSum=-0.610;VQSLOD=1.8873;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:24.08:0,24,967	0/0:2,0:2:6.02:0,6,296	0/0:23,0:20:55.64:0,56,1630	0/0:22,0:14:18.32:0,18,487	0/0:22,0:22:60.09:0,60,2873	0/0:19,0:18:57.20:0,57,2576	0/0:11,0:11:30.03:0,30,1467	0/1:17,2:19:99:242,0,1568	0/1:5,3:8:99:279,0,680	0/0:11,0:11:33.11:0,33,1639	0/0:11,0:11:30.10:0,30,1470	0/0:15,0:15:39.09:0,39,2059	0/0:10,0:10:26.97:0,27,1285	0/0:12,0:12:36.12:0,36,1722	0/0:14,0:14:39.12:0,39,1793	0/0:15,0:15:42.02:0,42,2061	0/1:10,1:11:36.92:37,0,763	0/0:13,0:13:39.13:0,39,1640	0/0:21,0:21:57.08:0,57,2331	0/0:11,0:11:33.11:0,33,1490	0/0:23,0:23:63.17:0,63,3024	0/0:8,0:8:24.08:0,24,1155	0/0:12,0:12:36.12:0,36,1756	0/0:14,0:14:42.14:0,42,2030	0/0:23,0:23:66.11:0,66,3233	0/1:16,4:19:99:405,0,1289	0/1:18,4:23:99:349,0,1830	0/1:1,2:3:99:200,0,124
chr10	1818321	.	CT	C	539.45	PASS	AB=0.816;AC=6;AF=0.107;AN=56;BaseQRankSum=3.908;DP=461;FS=10.085;HRun=12;HaplotypeScore=79.2036;InbreedingCoeff=0.2383;MQ=69.42;MQ0=3;MQRankSum=-4.270;QD=4.73;ReadPosRankSum=0.395;VQSLOD=1.0732;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:11,1:12:3.32:0,3,197	0/0:2,0:2:6.01:0,6,61	0/1:33,2:20:4.37:4,0,230	0/1:25,1:14:6.40:6,0,163	0/0:22,0:23:59.95:0,60,593	0/0:15,1:15:15.84:0,16,342	0/0:14,0:14:27:0,27,257	0/0:13,0:24:26.23:0,26,221	0/0:10,0:10:24.21:0,24,188	0/0:14,0:14:30.06:0,30,304	0/0:11,0:11:27.05:0,27,274	0/0:17,0:17:45.09:0,45,457	0/0:9,0:10:26.87:0,27,247	0/0:10,1:12:3.69:0,4,203	0/0:14,0:14:21.04:0,21,213	0/0:14,1:15:18.85:0,19,373	0/0:16,0:16:30.35:0,30,271	0/0:13,0:15:35.83:0,36,345	0/0:22,2:27:25.14:0,25,555	0/0:9,0:12:29.56:0,30,256	0/0:22,0:24:50.94:0,51,501	0/0:7,0:8:14.86:0,15,136	0/0:13,0:12:33.07:0,33,335	0/0:14,0:14:36.06:0,36,360	0/0:21,1:23:36.72:0,37,539	0/1:10,12:20:21.82:202,0,22	1/1:10,16:26:38:432,38,0	0/1:2,1:3:12.33:15,0,12
chr10	1818601	.	T	TCAGCTC	828.26	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=0.884;DP=580;FS=1.194;HRun=0;HaplotypeScore=128.7653;InbreedingCoeff=0.8912;MQ=88.10;MQ0=1;MQRankSum=-3.933;QD=48.72;ReadPosRankSum=0.809;VQSLOD=3.8537;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,99,2109	0/0:5,0:5:9.03:0,9,194	0/0:30,0:29:54.14:0,54,968	0/0:38,0:35:51.51:0,52,970	0/0:23,0:23:64.10:0,64,1260	0/0:19,0:19:45.15:0,45,969	0/0:24,0:24:57.19:0,57,1171	0/0:28,0:28:51.16:0,51,1018	1/1:13,4:17:36.12:923,36,0	0/0:27,0:27:48.16:0,48,989	0/0:14,0:14:27.09:0,27,578	0/0:20,0:20:36.11:0,36,732	0/0:18,0:18:48.16:0,48,1010	0/0:21,0:21:54.17:0,54,1076	0/0:25,0:25:54.17:0,54,1121	0/0:21,0:21:51.18:0,51,1091	0/0:18,0:18:48.13:0,48,990	0/0:17,0:17:42.08:0,42,795	0/0:14,0:14:27.07:0,27,499	0/0:19,0:19:36.12:0,36,747	0/0:14,0:14:36.12:0,36,755	0/0:19,0:19:48.16:0,48,1028	0/0:25,0:25:66.23:0,66,1414	0/0:18,0:17:42.14:0,42,856	0/0:28,0:28:63.22:0,63,1337	0/0:13,0:13:30.10:0,30,643	0/0:22,0:22:51.16:0,51,1058	0/0:4,0:4:8.82:0,9,142
chr10	1818624	.	CTCTCTG	C	447.65	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.549;DP=643;FS=1.033;HRun=0;HaplotypeScore=137.7385;InbreedingCoeff=0.9529;MQ=76.00;MQ0=3;MQRankSum=-3.864;QD=26.33;ReadPosRankSum=-0.510;VQSLOD=3.2247;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,105,3283	0/0:4,0:4:12.03:0,12,266	0/0:40,0:33:52.26:0,52,1232	0/0:61,0:49:51.75:0,52,1987	0/0:31,0:31:72.21:0,72,2294	0/0:27,0:26:66.23:0,66,2076	0/0:22,0:22:51.17:0,51,1499	0/0:30,0:30:60.18:0,60,1632	1/1:11,6:17:36.08:542,36,0	0/0:21,0:21:36.12:0,36,1188	0/0:14,0:14:27.08:0,27,812	0/0:14,0:14:42.13:0,42,1172	0/0:18,0:18:45.14:0,45,1430	0/0:21,0:21:48.16:0,48,1514	0/0:23,0:23:57.20:0,57,1734	0/0:26,0:26:63.22:0,63,2044	0/0:18,0:18:45.13:0,45,1360	0/0:14,0:14:32.59:0,33,1074	0/0:16,0:16:27.09:0,27,844	0/0:17,0:17:36.12:0,36,1199	0/0:22,0:22:60.21:0,60,1897	0/0:21,0:21:45.15:0,45,1384	0/0:25,0:25:66.21:0,66,2064	0/0:21,0:21:54.19:0,54,1747	0/0:22,0:22:54.19:0,54,1697	0/0:18,0:18:48.16:0,48,1508	0/0:25,0:25:57.20:0,57,1722	0/0:5,0:5:15.02:0,15,386
chr10	1819201	.	G	GT	3559.12	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-10.873;DP=611;FS=0.000;HRun=4;HaplotypeScore=58.3290;InbreedingCoeff=0.9952;MQ=78.71;MQ0=0;MQRankSum=-2.596;QD=33.90;ReadPosRankSum=3.072;VQSLOD=4.1490;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:78.22:0,78,884	0/0:8,0:8:21.06:0,21,236	0/0:16,0:16:45.09:0,45,487	0/0:12,0:12:30.08:0,30,330	0/0:19,0:19:48.13:0,48,544	0/0:16,0:16:48.14:0,48,545	0/0:28,0:28:75.21:0,75,851	0/0:37,0:37:90.23:0,90,1009	1/1:5,35:40:96.32:1313,96,0	0/0:30,0:30:78.22:0,78,885	0/0:8,0:8:21.06:0,21,235	0/0:22,0:22:63.18:0,63,714	0/0:30,0:30:87.25:0,87,985	0/0:18,0:18:48.10:0,48,523	0/0:18,0:18:54.15:0,54,613	0/0:26,0:26:78.22:0,78,885	0/0:28,0:28:81.23:0,81,919	0/0:18,0:18:51.15:0,51,579	0/0:22,0:22:60.17:0,60,680	0/0:21,0:21:60.17:0,60,678	0/0:27,0:27:75.21:0,75,850	0/0:21,0:21:54.15:0,54,610	0/0:11,0:11:30.08:0,30,338	0/0:21,0:21:57.16:0,57,646	0/0:20,0:20:57.16:0,57,647	1/1:1,22:24:38.18:891,38,0	1/1:3,30:33:81.27:1109,81,0	1/1:1,7:8:18.06:246,18,0
chr10	1819470	.	CGT	C	224.91	PASS	AB=0.949;AC=8;AF=0.182;AN=44;BaseQRankSum=2.746;DP=678;FS=0.000;HRun=0;HaplotypeScore=90.9490;InbreedingCoeff=-0.1228;MQ=58.91;MQ0=24;MQRankSum=0.325;QD=1.00;ReadPosRankSum=1.459;VQSLOD=1.5393;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:26:8.77:0,9,80	0/0:15,0:15:12.04:0,12,166	./.	./.	0/0:22,0:22:3.01:0,3,42	0/0:16,0:12:3.01:0,3,42	0/1:24,3:25:34.98:55,0,35	./.	1/1:21,0:25:8.52:42,9,0	0/0:24,0:24:3.48:0,3,43	0/0:7,0:7:6:0,6,68	0/0:27,0:27:6.02:0,6,87	0/0:17,0:17:3.01:0,3,44	0/1:21,0:21:22.22:22,0,76	0/1:25,0:25:68.21:68,0,232	./.	0/0:30,0:29:20.86:0,21,193	0/0:22,0:21:15.05:0,15,214	0/0:29,0:26:2.98:0,3,21	0/0:17,0:16:3.01:0,3,42	0/1:76,0:73:30.08:30,0,275	0/0:19,0:19:3.01:0,3,41	0/0:17,0:15:6.02:0,6,81	0/1:26,4:29:74.36:74,0,130	0/0:20,0:20:12.01:0,12,129	./.	0/1:18,2:18:34.79:55,0,35	./.
chr10	1819844	.	CT	C	1318.66	PASS	AB=0.873;AC=8;AF=0.143;AN=56;BaseQRankSum=5.548;DP=567;FS=3.557;HRun=11;HaplotypeScore=60.0955;InbreedingCoeff=0.6321;MQ=58.42;MQ0=4;MQRankSum=-2.484;QD=13.59;ReadPosRankSum=-0.640;VQSLOD=3.5847;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,27:28:71.91:591,72,0	0/1:7,1:8:6.60:7,0,142	0/0:37,0:16:30.82:0,31,231	0/0:24,2:11:1.61:0,2,188	0/0:22,0:22:51.13:0,51,542	0/1:10,2:11:19.20:19,0,225	0/0:13,0:13:30.08:0,30,320	1/1:5,21:27:64.95:521,65,0	0/0:9,0:9:21.04:0,21,217	0/0:38,0:38:90.22:0,90,951	0/0:15,1:16:17.46:0,17,383	0/0:17,0:17:45.10:0,45,472	0/0:16,0:16:38.90:0,39,400	0/0:21,0:22:50.95:0,51,518	0/0:31,0:32:44.64:0,45,675	0/0:17,0:16:36.09:0,36,382	1/1:5,16:21:31.41:331,31,0	0/0:19,0:20:51.12:0,51,537	0/0:20,1:21:11.34:0,11,311	0/0:18,0:18:36.09:0,36,382	0/0:11,1:12:5.43:0,5,263	0/0:15,0:14:39.10:0,39,415	0/0:25,1:26:35.96:0,36,660	0/0:12,1:13:8.03:0,8,273	0/0:30,2:32:53.51:0,54,761	0/0:23,0:23:32.51:0,33,551	0/0:19,0:19:42.11:0,42,447	0/0:6,0:6:15.04:0,15,159
chr10	1821423	.	G	GAAATGA	1108.02	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-0.279;DP=504;FS=0.000;HRun=0;HaplotypeScore=101.9513;InbreedingCoeff=0.9479;MQ=93.15;MQ0=0;MQRankSum=-6.040;QD=34.63;ReadPosRankSum=-0.286;VQSLOD=3.0215;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,9:25:27.09:916,27,0	0/0:11,0:11:33.11:0,33,728	0/0:19,0:19:51.17:0,51,1039	0/0:25,0:25:48.13:0,48,1007	0/0:24,0:24:69.19:0,69,1394	0/0:26,0:25:74.41:0,74,1609	0/0:13,0:13:36.11:0,36,733	0/0:26,0:26:54.17:0,54,1136	0/0:20,0:20:57.18:0,57,1214	0/0:21,0:21:54.19:0,54,1190	0/0:26,0:26:57.20:0,57,1241	0/0:18,0:18:45.13:0,45,909	0/0:15,0:15:45.13:0,45,932	0/0:15,0:15:39.13:0,39,859	0/0:17,0:17:51.18:0,51,1106	0/0:11,0:11:27.09:0,27,595	1/1:3,4:7:9.03:306,9,0	0/0:27,0:27:72.20:0,72,1540	0/0:14,0:14:30.07:0,30,603	0/0:20,0:20:48.15:0,48,1001	0/0:15,0:15:36.11:0,36,751	0/0:19,0:19:48.15:0,48,1017	0/0:14,0:14:36.12:0,36,793	0/0:6,0:6:12.04:0,12,265	0/0:15,0:15:42.14:0,42,925	0/0:25,0:25:72.25:0,72,1583	0/0:24,0:24:72.19:0,72,1500	0/0:6,0:6:18.03:0,18,353
chr10	1821591	.	AAGTGCTTC	A	1915.93	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.740;DP=488;FS=9.313;HRun=0;HaplotypeScore=119.2911;InbreedingCoeff=0.9663;MQ=88.50;MQ0=0;MQRankSum=-8.233;QD=53.22;ReadPosRankSum=0.294;VQSLOD=2.5712;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,20:23:51.18:1442,51,0	0/0:4,0:4:9.03:0,9,334	0/0:21,0:21:59.94:0,60,2391	0/0:15,0:15:45.15:0,45,1674	0/0:18,0:18:51.16:0,51,2062	0/0:31,0:31:87.30:0,87,3752	0/0:15,0:15:45.15:0,45,1995	0/0:25,0:25:72.25:0,72,3168	0/0:21,0:21:60.19:0,60,2504	0/0:16,0:16:48.16:0,48,2080	0/0:19,0:19:57.20:0,57,2416	0/0:11,0:11:33.11:0,33,1389	0/0:13,0:13:36.12:0,36,1594	0/0:15,0:15:39.13:0,39,1681	0/0:14,0:14:42.14:0,42,1862	0/0:14,0:14:39.13:0,39,1584	1/1:2,11:13:21.07:594,21,0	0/0:16,0:16:45.15:0,45,1891	0/0:11,0:11:33.11:0,33,1366	0/0:28,0:28:81.28:0,81,3464	0/0:13,0:13:36.12:0,36,1546	0/0:25,0:25:75.26:0,75,3268	0/0:16,0:16:48.16:0,48,2013	0/0:21,0:21:63.22:0,63,2707	0/0:23,0:23:69.22:0,69,2886	0/0:21,0:21:63.22:0,63,2731	0/0:19,0:19:57.20:0,57,2291	0/0:7,0:7:21.07:0,21,928
chr10	1821792	.	G	GA	3125.47	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-12.420;DP=575;FS=0.899;HRun=5;HaplotypeScore=55.7483;InbreedingCoeff=0.9921;MQ=79.16;MQ0=0;MQRankSum=0.477;QD=30.05;ReadPosRankSum=-0.364;VQSLOD=3.7714;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,32:36:96.31:1263,96,0	0/0:8,0:8:15.03:0,15,161	0/0:14,0:15:35.09:0,35,347	0/0:15,0:15:33.40:0,33,350	0/0:28,0:28:78.19:0,78,838	0/0:18,0:18:51.13:0,51,548	0/0:15,0:15:45.11:0,45,484	1/1:5,19:24:57.16:720,57,0	1/1:1,21:22:51.17:671,51,0	0/0:31,0:31:90.21:0,90,955	0/0:15,0:15:39.10:0,39,419	0/0:18,0:18:54.14:0,54,580	0/0:20,0:20:60.15:0,60,645	0/0:16,0:16:42.10:0,42,451	0/0:20,0:20:57.14:0,57,613	0/0:17,0:17:51.13:0,51,548	1/1:3,19:22:48.16:632,48,0	0/0:20,0:20:57.10:0,57,612	0/0:24,0:24:66.16:0,66,709	0/0:22,0:22:66.17:0,66,709	0/0:22,0:22:66.15:0,66,701	0/0:8,0:8:21.05:0,21,226	0/0:16,0:16:45.11:0,45,482	0/0:30,0:30:78.15:0,78,814	0/0:27,0:27:71.80:0,72,762	0/0:33,0:33:96.24:0,96,1032	0/0:26,0:26:75.19:0,75,806	0/0:7,0:7:18.04:0,18,193
chr10	1824508	.	A	AGCGCGCGCACGC	1320.55	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=5.830;DP=574;FS=24.117;HRun=0;HaplotypeScore=178.0634;InbreedingCoeff=0.8944;MQ=66.98;MQ0=14;MQRankSum=-5.533;QD=17.61;ReadPosRankSum=-4.286;VQSLOD=0.3301;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:2,15:31:6.02:219,6,0	0/0:9,0:9:27.09:0,27,962	0/0:43,0:32:87.30:0,87,2758	0/0:29,0:18:51.15:0,51,1603	0/0:20,0:20:51.17:0,51,1727	0/0:16,0:15:27.03:0,27,743	0/0:13,0:13:27.08:0,27,774	1/1:21,0:21:55.77:949,56,0	0/0:22,0:22:6.70:0,7,35	0/0:14,0:14:39.13:0,39,1327	0/0:19,0:19:48.08:0,48,1452	0/0:15,0:15:39.13:0,39,1342	0/0:19,0:19:38.85:0,39,987	0/0:22,0:22:54.17:0,54,1859	0/0:30,0:30:72.25:0,72,2480	0/0:19,0:19:45.14:0,45,1489	1/1:4,7:23:9.03:281,9,0	0/0:14,0:13:35.10:0,35,1164	0/0:18,0:18:42.14:0,42,1277	0/0:15,0:14:36.12:0,36,1271	0/0:24,0:24:60.18:0,60,2020	0/0:17,0:17:45.15:0,45,1592	0/0:19,0:19:42.56:0,43,1284	0/0:33,0:34:75.26:0,75,2342	0/0:10,0:10:21.07:0,21,705	0/0:22,0:22:50.45:0,50,1816	0/0:30,0:30:62.58:0,63,1391	0/0:6,0:5:12.04:0,12,323
chr10	1824511	.	G	GCACA	1905.91	PASS	AB=0.858;AC=18;AF=0.346;AN=52;BaseQRankSum=-0.313;DP=596;FS=0.598;HRun=0;HaplotypeScore=110.6833;InbreedingCoeff=0.3783;MQ=65.39;MQ0=15;MQRankSum=-3.776;QD=7.72;ReadPosRankSum=-0.742;VQSLOD=2.6701;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:21:1.53:26,2,0	0/0:11,0:11:15:0,15,184	./.	./.	0/0:20,0:20:15.05:0,15,233	0/0:13,0:17:17.60:0,18,211	0/1:10,3:15:21.90:65,0,22	1/1:18,0:18:37.90:513,38,0	1/1:2,0:21:3.69:128,4,0	0/1:19,0:19:8.24:8,0,70	0/0:19,0:19:15.05:0,15,231	0/0:15,0:16:18.03:0,18,218	0/0:18,0:21:35.75:0,36,469	0/0:23,0:23:33.09:0,33,543	0/0:25,0:30:39.09:0,39,527	0/0:19,0:22:39.46:0,39,482	0/1:20,0:20:26.36:55,0,26	0/0:15,0:16:1.57:0,2,135	0/0:19,0:19:5.89:0,6,93	0/0:14,0:16:24.07:0,24,330	0/0:27,0:27:20.98:0,21,231	0/0:17,0:17:9.03:0,9,136	0/1:17,2:20:1.19:74,0,1	0/1:22,0:37:73.85:74,0,80	0/1:10,2:14:42.60:63,0,43	1/1:15,8:23:27.03:454,27,0	1/1:13,14:33:33.81:543,34,0	1/1:4,2:5:3.01:71,3,0
chr10	1824998	.	T	TA	1434.02	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-6.616;DP=552;FS=4.485;HRun=8;HaplotypeScore=56.6545;InbreedingCoeff=0.9720;MQ=71.04;MQ0=0;MQRankSum=-0.857;QD=26.07;ReadPosRankSum=0.537;VQSLOD=4.4590;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:96:0,96,863	0/0:12,0:12:33.02:0,33,302	0/0:7,0:7:14.95:0,15,124	0/0:15,0:12:8.98:0,9,88	0/0:29,0:29:80.99:0,81,726	0/0:26,0:26:66.03:0,66,604	0/0:15,0:15:45.01:0,45,407	0/0:22,0:22:57.02:0,57,522	0/0:19,0:19:48:0,48,434	0/0:27,0:27:66:0,66,597	0/0:21,0:21:53.95:0,54,475	0/0:11,0:11:33.02:0,33,302	0/0:16,0:16:39.02:0,39,357	0/0:18,0:18:41.90:0,42,369	0/0:21,0:21:54.01:0,54,494	0/0:21,0:21:63.02:0,63,572	0/0:41,0:41:99:0,104,907	0/0:21,0:21:60.01:0,60,543	0/0:11,0:11:27.01:0,27,247	0/0:22,0:22:57.02:0,57,521	0/0:9,0:9:24:0,24,215	0/0:19,0:19:53.97:0,54,482	0/0:14,0:14:33:0,33,298	0/0:21,0:21:59.99:0,60,541	0/0:25,0:25:71.95:0,72,642	1/1:3,22:25:66.18:750,66,0	1/1:4,15:19:45.13:516,45,0	1/1:2,9:11:27.04:311,27,0
chr10	1826591	.	CT	C	2726.23	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=4.992;DP=608;FS=7.333;HRun=1;HaplotypeScore=67.8308;InbreedingCoeff=0.9857;MQ=53.97;MQ0=18;MQRankSum=-0.119;QD=26.21;ReadPosRankSum=2.435;VQSLOD=3.1637;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,39:38:90.29:1213,90,0	0/0:8,0:7:21.07:0,21,335	0/0:16,0:4:12.04:0,12,189	0/0:17,0:9:23.71:0,24,312	0/0:21,0:21:42.14:0,42,657	0/0:23,0:23:60.20:0,60,958	0/0:18,0:18:48.16:0,48,766	1/1:2,20:20:51.16:695,51,0	0/0:16,0:16:36.08:0,36,547	0/0:24,0:24:72.19:0,72,1081	0/0:18,0:17:45.15:0,45,678	0/0:21,0:21:57.17:0,57,861	0/0:16,0:16:45.15:0,45,718	0/0:23,0:23:60.19:0,60,935	0/0:17,0:16:42.13:0,42,648	0/0:21,0:19:45.15:0,45,719	1/1:1,42:42:69.19:960,69,0	0/0:28,0:27:72.23:0,72,1116	0/0:22,0:17:51.16:0,51,791	0/0:17,0:17:30.10:0,30,470	0/0:49,0:46:99:0,114,1740	0/0:25,0:25:60.16:0,60,904	0/0:16,0:16:30.09:0,30,437	0/0:21,0:21:54.14:0,54,792	0/0:15,0:14:36.07:0,36,529	0/0:15,0:15:42.13:0,42,650	0/0:28,0:28:77.95:0,78,1215	0/0:8,0:8:24.07:0,24,339
chr10	1827317	.	TG	T	453.27	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.604;DP=627;FS=0.000;HRun=6;HaplotypeScore=77.1764;InbreedingCoeff=0.9994;MQ=81.74;MQ0=0;MQRankSum=-2.461;QD=23.86;ReadPosRankSum=-3.840;VQSLOD=1.5573;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,111,1459	0/0:12,0:12:36.12:0,36,473	0/0:23,0:23:54.17:0,54,681	0/0:17,1:18:45.12:0,45,567	0/0:34,0:34:93.29:0,93,1202	0/0:22,0:22:60.19:0,60,787	0/0:21,0:21:63.20:0,63,827	1/1:2,17:19:51.12:548,51,0	0/0:23,0:23:69.22:0,69,904	0/0:39,0:39:99:0,108,1417	0/0:25,0:25:69.18:0,69,875	0/0:25,0:25:75.23:0,75,960	0/0:18,0:18:45.15:0,45,591	0/0:15,0:15:39.13:0,39,512	0/0:25,0:25:72.22:0,72,934	0/0:23,0:23:63.19:0,63,802	0/0:20,0:20:57.14:0,57,716	0/0:27,0:27:78.25:0,78,1025	0/0:16,0:16:42.14:0,42,552	0/0:21,0:21:63.20:0,63,820	0/0:16,0:16:48.16:0,48,632	0/0:27,0:27:78.25:0,78,1025	0/0:30,0:30:81.26:0,81,1053	0/0:21,0:21:60.20:0,60,789	0/0:19,0:19:51.17:0,51,671	0/0:16,0:16:42.11:0,42,514	0/0:22,0:22:66.17:0,66,822	0/0:11,0:11:33.11:0,33,434
chr10	1828444	.	CTCTCTT	C	1409.37	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.067;DP=656;FS=13.259;HRun=0;HaplotypeScore=139.9696;InbreedingCoeff=0.9989;MQ=68.13;MQ0=0;MQRankSum=-7.719;QD=39.15;ReadPosRankSum=0.171;VQSLOD=2.9446;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,33:36:66.11:1504,66,0	0/0:13,0:13:39.13:0,39,1272	0/0:27,0:22:54.09:0,54,1267	0/0:26,0:24:60.67:0,61,1544	0/0:24,0:24:72.20:0,72,2295	0/0:26,0:26:78.25:0,78,2574	0/0:28,0:28:78.21:0,78,2147	0/0:25,0:25:66.22:0,66,1947	0/0:32,0:32:93.29:0,93,3050	0/0:35,0:35:99:0,102,3233	0/0:18,0:18:54.19:0,54,1715	0/0:18,0:18:54.18:0,54,1587	0/0:14,0:14:42.11:0,42,1321	0/0:22,0:22:66.23:0,66,2275	0/0:22,0:22:66.19:0,66,1917	0/0:21,0:21:63.19:0,63,1992	0/0:29,0:29:84.18:0,84,2481	0/0:34,0:34:99:0,99,3405	0/0:19,0:19:57.16:0,57,1643	0/0:27,0:27:81.25:0,81,2645	0/0:25,0:25:66.23:0,66,2366	0/0:22,0:22:60.20:0,60,1903	0/0:17,0:17:48.15:0,48,1443	0/0:23,0:23:69.21:0,69,2244	0/0:18,0:18:54.18:0,54,1857	0/0:20,0:20:57.18:0,57,1790	0/0:26,0:25:72.20:0,72,2111	0/0:9,0:9:26.99:0,27,670
chr10	1830818	.	T	TAA	1814.48	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-1.212;DP=499;FS=6.251;HRun=13;HaplotypeScore=65.7643;InbreedingCoeff=0.8669;MQ=59.28;MQ0=3;MQRankSum=-1.640;QD=15.25;ReadPosRankSum=-1.598;VQSLOD=2.1235;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,25:40:46.71:562,47,0	0/0:10,0:10:26.96:0,27,233	0/0:4,0:1:2.74:0,3,12	0/0:8,0:8:10.87:0,11,82	0/0:18,0:21:44.51:0,45,371	0/0:14,0:15:35.64:0,36,302	0/0:14,0:14:26.98:0,27,238	1/1:22,0:27:24.01:237,24,0	1/1:2,17:20:44.58:558,45,0	0/0:24,0:24:31.56:0,32,334	0/0:25,0:25:32.41:0,32,275	0/0:10,0:10:17.81:0,18,154	0/0:10,0:10:23.86:0,24,200	0/0:10,0:11:17.71:0,18,144	0/0:17,0:20:26.14:0,26,252	0/0:18,0:18:41.93:0,42,370	1/1:4,20:30:50.13:616,50,0	0/0:27,0:29:62.29:0,62,525	0/0:21,0:21:3.38:0,3,204	0/0:23,0:24:42.83:0,43,371	0/0:13,0:13:26.88:0,27,237	0/0:6,0:6:15:0,15,132	0/0:11,0:12:29.65:0,30,246	0/0:12,0:13:23.60:0,24,197	0/0:16,0:19:38.31:0,38,306	0/0:23,0:24:37.51:0,38,341	0/0:23,0:24:41.31:0,41,414	0/0:3,0:2:6:0,6,53
chr10	1836076	.	AG	A	3708.76	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=12.486;DP=788;FS=2.735;HRun=5;HaplotypeScore=87.4984;InbreedingCoeff=0.9990;MQ=83.29;MQ0=0;MQRankSum=-1.831;QD=29.67;ReadPosRankSum=-0.123;VQSLOD=3.8076;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,53:54:99:1599,141,0	0/0:13,0:13:30.10:0,30,410	0/0:24,1:24:63.21:0,63,841	0/0:28,0:27:72.07:0,72,905	0/0:19,0:19:54.15:0,54,702	0/0:20,0:20:57.19:0,57,777	0/0:30,0:30:87.29:0,87,1186	1/1:2,23:25:69.20:783,69,0	0/0:26,0:26:72.24:0,72,985	0/0:29,0:29:78.26:0,78,1067	0/0:10,0:10:24.07:0,24,314	0/0:26,0:26:72.24:0,72,975	0/0:29,0:29:87.29:0,87,1184	0/0:39,0:39:99:0,114,1534	0/0:41,0:41:99:0,117,1581	0/0:32,0:32:93.31:0,93,1267	1/1:3,43:46:99:1327,117,0	0/0:21,0:21:57.19:0,57,777	0/0:23,0:23:63.20:0,63,860	0/0:21,0:21:63.18:0,63,829	0/0:70,0:70:99:0,194,2621	0/0:20,0:19:54.18:0,54,739	0/0:25,0:25:69.19:0,69,894	0/0:44,0:44:99:0,132,1787	0/0:18,0:18:51.17:0,51,690	0/0:25,0:25:69.23:0,69,941	0/0:17,0:17:45.15:0,45,615	0/0:12,0:12:36.12:0,36,492
chr10	1836584	.	G	GCATGC	1508.12	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=0.719;DP=672;FS=6.081;HRun=0;HaplotypeScore=130.1338;InbreedingCoeff=0.9979;MQ=79.88;MQ0=0;MQRankSum=-5.970;QD=62.84;ReadPosRankSum=-0.171;VQSLOD=4.5424;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:90.31:0,90,1844	0/0:10,0:10:30.10:0,30,622	0/0:15,0:15:27.03:0,27,427	0/0:19,0:19:33.14:0,33,595	0/0:34,0:34:99:0,102,2072	0/0:24,0:24:63.22:0,63,1302	0/0:24,0:24:69.24:0,69,1392	0/0:36,0:36:84.28:0,84,1674	1/1:6,18:24:57.11:1603,57,0	0/0:33,0:33:87.29:0,87,1769	0/0:29,0:29:72.25:0,72,1488	0/0:24,0:24:72.25:0,72,1493	0/0:23,0:23:66.21:0,66,1293	0/0:21,0:21:63.19:0,63,1238	0/0:23,0:23:69.24:0,69,1426	0/0:20,0:20:60.19:0,60,1195	0/0:26,0:26:69.21:0,69,1335	0/0:18,0:18:48.16:0,48,991	0/0:26,0:26:66.23:0,66,1364	0/0:28,0:28:81.28:0,81,1633	0/0:31,0:31:84.29:0,84,1729	0/0:21,0:21:63.22:0,63,1301	0/0:20,0:20:57.17:0,57,1101	0/0:29,0:29:81.28:0,81,1654	0/0:25,0:25:69.21:0,69,1352	0/0:16,0:16:45.13:0,45,859	0/0:29,0:29:81.28:0,81,1648	0/0:12,0:12:33.11:0,33,636
chr10	1838272	.	C	CGTGTGT	862.05	PASS	AB=1.000;AC=13;AF=0.241;AN=54;BaseQRankSum=5.420;DP=590;FS=20.642;HRun=0;HaplotypeScore=142.0531;InbreedingCoeff=0.8101;MQ=66.52;MQ0=10;MQRankSum=-4.978;QD=7.70;ReadPosRankSum=-3.983;VQSLOD=0.1097;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:24:0.08:0,0,0	0/0:12,0:11:12.02:0,12,198	0/0:41,0:26:5.81:0,6,74	./.	0/0:14,0:14:11.63:0,12,206	0/0:21,0:21:27.06:0,27,460	0/0:37,0:36:26.52:0,27,503	1/1:25,0:20:14.55:252,15,0	1/1:17,0:16:11.34:180,11,0	0/0:26,0:26:23.88:0,24,431	0/0:16,0:16:27.08:0,27,501	0/0:22,0:22:12.54:0,13,206	0/0:11,0:11:8.56:0,9,184	0/0:14,0:14:21.05:0,21,379	0/0:21,0:21:30.54:0,31,528	0/0:22,0:22:33:0,33,618	1/1:11,0:12:12.04:244,12,0	0/0:15,0:13:18.03:0,18,309	0/0:15,0:15:9.03:0,9,185	0/0:18,0:18:33.08:0,33,601	0/0:50,0:49:42.50:0,42,763	0/0:23,0:23:19.95:0,20,349	0/0:16,0:16:27.01:0,27,469	0/0:43,0:43:63.19:0,63,1188	0/0:18,0:18:20.96:0,21,381	1/1:17,0:16:13.86:260,14,0	1/1:7,4:11:3.48:41,3,0	1/1:6,0:6:3.01:47,3,0
chr10	1838376	.	CTGGTGGCAG	C	1045.11	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.759;DP=580;FS=29.078;HRun=0;HaplotypeScore=159.8689;InbreedingCoeff=0.9955;MQ=95.86;MQ0=0;MQRankSum=-4.527;QD=65.32;ReadPosRankSum=-1.751;VQSLOD=1.4718;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:45.15:0,45,2008	0/0:14,0:14:42.14:0,42,2034	0/0:33,0:31:81.19:0,81,3452	0/0:44,0:38:61.15:0,61,3326	0/0:37,0:37:99:0,108,5141	0/0:19,0:19:57.20:0,57,2669	0/0:21,0:21:60.21:0,60,2942	1/1:3,13:16:39.13:1140,39,0	0/0:19,0:19:54.19:0,54,2646	0/0:20,0:20:57.20:0,57,2745	0/0:9,0:9:27.09:0,27,1229	0/0:25,0:25:75.26:0,75,3622	0/0:11,0:11:33.11:0,33,1318	0/0:13,0:13:39.13:0,39,1912	0/0:23,0:23:69.24:0,69,3348	0/0:20,0:20:54.19:0,54,2648	0/0:11,0:11:24.08:0,24,1166	0/0:18,0:18:51.18:0,51,2475	0/0:20,0:20:60.16:0,60,2659	0/0:22,0:22:63.22:0,63,3063	0/0:21,0:21:57.20:0,57,2538	0/0:23,0:23:69.24:0,69,3323	0/0:18,0:18:54.19:0,54,2568	0/0:34,0:34:99:0,99,4435	0/0:27,0:27:78.27:0,78,3715	0/0:18,0:18:48.16:0,48,2353	0/0:19,0:19:51.18:0,51,2475	0/0:9,0:9:27.09:0,27,1201
chr10	1839950	.	TTC	T	3729.90	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.256;DP=627;FS=10.442;HRun=0;HaplotypeScore=81.3338;InbreedingCoeff=0.9996;MQ=78.31;MQ0=2;MQRankSum=-2.461;QD=36.21;ReadPosRankSum=0.521;VQSLOD=5.4777;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,33:37:78.26:1111,78,0	0/0:13,0:13:33:0,33,605	0/0:42,0:35:74.27:0,74,1479	0/0:35,0:27:66.07:0,66,1163	0/0:21,0:21:57.20:0,57,1044	0/0:19,0:19:39.13:0,39,715	0/0:18,0:18:45.15:0,45,822	1/1:0,32:32:96.32:1372,96,0	0/0:16,0:16:33.11:0,33,602	0/0:15,0:15:42.14:0,42,735	0/0:13,0:13:36.12:0,36,660	0/0:18,0:18:39.12:0,39,684	0/0:17,0:17:45.15:0,45,795	0/0:15,0:15:42.13:0,42,740	0/0:19,0:19:45.15:0,45,825	0/0:23,0:23:60.21:0,60,1099	1/1:1,33:34:87.29:1247,87,0	0/0:23,0:23:57.14:0,57,979	0/0:30,0:29:87.28:0,87,1525	0/0:18,0:17:42.14:0,42,750	0/0:29,0:29:72.25:0,72,1293	0/0:19,0:19:51.17:0,51,883	0/0:19,0:19:57.15:0,57,994	0/0:26,0:26:69.22:0,69,1216	0/0:15,0:15:45.15:0,45,823	0/0:20,0:20:57.18:0,57,997	0/0:29,0:29:84.29:0,84,1509	0/0:11,0:11:33.11:0,33,567
chr10	1840496	.	TTTTG	T	2073.84	PASS	AB=0.864;AC=11;AF=0.196;AN=56;BaseQRankSum=7.877;DP=539;FS=2.613;HRun=0;HaplotypeScore=95.6554;InbreedingCoeff=0.4401;MQ=68.11;MQ0=0;MQRankSum=0.489;QD=13.38;ReadPosRankSum=1.964;VQSLOD=3.0762;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:25:30.10:0,30,539	0/0:7,0:7:12.04:0,12,290	0/0:19,0:19:30.04:0,30,568	0/0:22,0:17:21.07:0,21,451	0/0:35,0:35:60.21:0,60,1437	0/0:23,0:23:42.14:0,42,1015	0/0:22,0:22:42.13:0,42,903	0/0:20,0:20:18.06:0,18,404	1/1:7,12:19:30.10:485,30,0	0/0:18,0:18:36.12:0,36,843	0/0:23,0:23:36.11:0,36,802	0/1:27,1:28:2.89:3,0,1501	0/0:9,0:9:21.07:0,21,507	0/1:7,1:8:27.40:27,0,405	0/1:16,2:18:9.34:9,0,815	0/0:8,0:8:18.06:0,18,435	0/0:8,0:24:45.15:0,45,780	0/0:11,0:11:15.05:0,15,362	0/1:25,1:26:21.39:21,0,549	0/0:20,0:21:23.20:0,23,1076	0/0:18,0:18:36.12:0,36,831	0/0:21,0:21:51.18:0,51,1232	0/0:22,0:22:45.14:0,45,1018	0/0:18,0:18:36.10:0,36,820	0/0:18,0:18:27.08:0,27,606	0/1:9,17:26:87.86:765,0,88	1/1:6,20:25:48.16:776,48,0	1/1:1,3:4:9.03:145,9,0
chr10	1841632	.	GCACTGA	G	2818.89	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=9.749;DP=574;FS=3.938;HRun=0;HaplotypeScore=93.6758;InbreedingCoeff=0.9374;MQ=49.80;MQ0=43;MQRankSum=-9.728;QD=37.59;ReadPosRankSum=0.797;VQSLOD=3.0724;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,19:16:33.11:812,33,0	0/0:10,0:7:21.07:0,21,764	0/0:9,0:2:6.02:0,6,158	0/0:20,0:2:6.02:0,6,161	0/0:31,0:29:84.29:0,84,3022	0/0:24,0:20:57.20:0,57,2088	0/0:22,0:20:33.11:0,33,1188	1/1:5,14:12:26.81:616,27,0	1/1:2,8:9:18.06:443,18,0	0/0:15,0:14:42.13:0,42,1425	0/0:18,0:18:51.18:0,51,1755	0/0:16,0:13:36.12:0,36,1311	0/0:13,0:12:30.10:0,30,1087	0/0:16,0:14:33.11:0,33,1206	0/0:26,0:22:63.22:0,63,2205	0/0:9,0:7:18.06:0,18,652	1/1:4,20:19:45.15:1107,45,0	0/0:34,0:31:84.29:0,84,2974	0/0:32,0:21:57.20:0,57,1999	0/0:24,0:24:63.19:0,63,2138	0/0:32,0:26:75.01:0,75,2674	0/0:17,0:13:36.12:0,36,1317	0/0:18,0:17:47.82:0,48,1580	0/0:25,0:25:75.26:0,75,2740	0/0:28,0:28:84.29:0,84,3078	0/0:26,0:24:69.24:0,69,2517	0/0:26,0:24:69.24:0,69,2520	0/0:8,0:8:24.08:0,24,879
chr10	1842638	.	GA	G	1614.19	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.270;DP=617;FS=7.467;HRun=9;HaplotypeScore=62.3215;InbreedingCoeff=0.9940;MQ=66.73;MQ0=3;MQRankSum=-6.385;QD=17.55;ReadPosRankSum=-1.866;VQSLOD=3.0431;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,22:25:39.01:357,39,0	0/0:17,0:17:45.13:0,45,519	0/0:27,0:19:30.17:0,30,392	0/0:23,0:19:48.24:0,48,557	0/0:28,2:30:29.30:0,29,836	0/0:21,0:22:60.01:0,60,672	0/0:15,0:15:36.11:0,36,415	1/1:8,32:40:72.68:851,73,0	0/0:16,0:17:41.94:0,42,453	0/0:40,0:40:99:0,105,1204	0/0:23,0:23:54.14:0,54,605	0/0:22,0:22:60.12:0,60,669	0/0:20,0:20:60.18:0,60,692	0/0:21,0:21:54.14:0,54,612	0/0:20,0:20:57.17:0,57,657	0/0:11,0:11:33.08:0,33,370	1/1:1,26:27:60.03:549,60,0	0/0:19,0:19:48.12:0,48,554	0/0:22,1:23:23.67:0,24,510	0/0:25,0:25:66.20:0,66,762	0/0:8,0:8:21.05:0,21,234	0/0:17,0:17:42.12:0,42,484	0/0:16,0:16:42.12:0,42,484	0/0:16,0:16:39.12:0,39,450	0/0:16,1:17:17.67:0,18,457	0/0:25,0:25:72.21:0,72,825	0/0:35,0:35:87.26:0,87,1004	0/0:16,0:16:48.14:0,48,554
chr10	1844642	.	GT	G	2390.04	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=12.312;DP=405;FS=4.428;HRun=9;HaplotypeScore=38.7285;InbreedingCoeff=0.8732;MQ=68.68;MQ0=0;MQRankSum=-0.326;QD=20.60;ReadPosRankSum=2.455;VQSLOD=4.0373;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,15:16:42.02:384,42,0	0/0:4,0:5:14.91:0,15,153	0/0:5,0:4:7.84:0,8,99	0/1:9,0:9:34.29:34,0,62	0/0:12,0:12:33.09:0,33,371	0/0:18,1:19:20.69:0,21,492	0/0:18,0:18:48.10:0,48,531	0/0:33,0:33:72.20:0,72,815	1/1:2,12:14:33.01:302,33,0	0/0:18,0:18:42.11:0,42,467	0/0:17,0:17:51.15:0,51,588	0/0:8,0:8:21.06:0,21,242	0/0:8,0:8:21.06:0,21,242	0/0:13,0:13:30.08:0,30,337	0/0:10,0:10:24.06:0,24,267	0/0:16,0:16:45.10:0,45,491	1/1:1,26:27:75.04:686,75,0	0/0:20,0:22:59.98:0,60,649	0/0:12,0:12:21.05:0,21,234	0/0:19,0:19:57.17:0,57,658	0/0:9,0:9:27.07:0,27,302	0/0:10,0:10:27.08:0,27,312	0/0:13,2:15:11.70:0,12,388	0/0:11,0:11:30.07:0,30,334	0/0:9,0:9:27.08:0,27,312	1/1:3,15:18:45:405,45,0	1/1:2,21:23:60.03:549,60,0	1/1:0,9:9:24.01:220,24,0
chr10	1844757	.	C	CT	396.87	PASS	AB=0.917;AC=5;AF=0.093;AN=54;BaseQRankSum=6.734;DP=262;FS=12.460;HRun=7;HaplotypeScore=34.6979;InbreedingCoeff=0.2790;MQ=67.19;MQ0=0;MQRankSum=2.556;QD=7.78;ReadPosRankSum=1.490;VQSLOD=-0.1510;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:6,3:9:3.04:94,0,3	0/0:3,0:3:9.01:0,9,87	0/1:5,0:4:19.96:20,0,43	./.	0/0:15,0:15:36.04:0,36,343	0/0:12,0:12:27.04:0,27,261	0/0:4,0:4:9.01:0,9,87	0/0:31,0:30:55.45:0,55,214	0/0:2,0:2:5.34:0,5,22	0/0:11,0:11:33.05:0,33,319	0/0:10,0:10:30.02:0,30,279	0/0:2,0:2:3:0,3,29	0/0:9,0:9:21.02:0,21,195	0/0:3,0:3:9.01:0,9,87	0/0:4,0:4:12.02:0,12,116	0/0:9,0:9:24.01:0,24,222	1/1:15,11:26:11.42:380,11,0	0/0:13,0:13:33.01:0,33,310	0/0:18,0:18:39.06:0,39,377	0/0:10,0:10:27.04:0,27,257	0/0:6,0:6:15.01:0,15,139	0/0:5,0:5:12.02:0,12,116	0/0:2,0:2:3:0,3,29	0/0:2,0:2:6:0,6,53	0/0:9,0:9:21.03:0,21,203	0/0:20,0:20:41.44:0,41,174	0/1:11,0:11:18.84:19,0,74	0/0:9,0:9:24.79:0,25,110
chr10	1844765	.	A	AATT	1178.25	PASS	AB=0.750;AC=3;AF=0.056;AN=54;BaseQRankSum=3.539;DP=251;FS=12.870;HRun=0;HaplotypeScore=42.2021;InbreedingCoeff=0.2250;MQ=65.14;MQ0=2;MQRankSum=-0.638;QD=35.70;ReadPosRankSum=3.551;VQSLOD=3.1265;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:6,3:9:14.15:261,0,14	0/0:3,0:3:9.03:0,9,159	0/0:4,0:3:8.92:0,9,68	./.	0/0:13,0:13:39.12:0,39,637	0/0:11,0:11:33.10:0,33,544	0/0:3,0:3:9.03:0,9,135	0/0:37,0:34:87.87:0,88,496	0/0:2,0:2:5.17:0,5,20	0/0:12,0:12:36.12:0,36,601	0/0:9,0:9:27.09:0,27,442	0/0:1,0:1:3.01:0,3,42	0/0:9,0:9:21.06:0,21,296	0/0:3,0:3:9.03:0,9,136	0/0:5,0:5:15.05:0,15,253	0/0:7,0:7:21.06:0,21,297	1/1:13,11:24:1.97:1007,2,0	0/0:13,0:13:36.12:0,36,601	0/0:15,0:15:42.13:0,42,631	0/0:9,0:9:27.08:0,27,380	0/0:4,0:4:12.04:0,12,188	0/0:4,0:4:12.04:0,12,177	0/0:1,0:1:3.01:0,3,53	0/0:2,0:2:3.01:0,3,53	0/0:7,0:7:21.07:0,21,359	0/0:20,0:20:25.57:0,26,300	0/0:11,0:11:29.72:0,30,245	0/0:10,0:10:25.93:0,26,195
chr10	1845677	.	CAT	C	136.14	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.438;DP=436;FS=12.913;HRun=0;HaplotypeScore=68.9039;InbreedingCoeff=0.7209;MQ=68.25;MQ0=6;MQRankSum=-2.229;QD=11.35;ReadPosRankSum=-0.504;VQSLOD=2.0503;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:51.25:0,51,478	0/0:5,0:5:15.02:0,15,190	0/0:21,0:12:35.68:0,36,320	0/0:25,0:16:39:0,39,361	0/0:19,0:18:18.97:0,19,426	0/0:22,0:22:51.84:0,52,652	0/0:9,0:9:27.05:0,27,399	0/0:16,0:16:34.63:0,35,372	1/1:6,6:12:26.94:230,27,0	0/0:15,0:15:45.03:0,45,520	0/0:11,0:10:24.04:0,24,318	0/0:9,0:9:24.51:0,25,347	0/0:12,0:12:35.56:0,36,384	0/0:16,0:16:30.18:0,30,440	0/0:12,0:12:13.06:0,13,256	0/0:14,0:14:41.99:0,42,477	0/0:23,0:23:50.36:0,50,524	0/0:12,0:11:13.23:0,13,214	0/0:23,0:23:65.96:0,66,697	0/0:4,0:4:5.99:0,6,48	0/0:19,0:19:50.89:0,51,493	0/0:4,0:4:12:0,12,121	0/0:10,0:10:4.20:0,4,212	0/0:26,0:26:56.91:0,57,847	0/0:23,0:23:52.85:0,53,695	0/0:12,0:12:16.17:0,16,185	0/0:23,0:23:40.66:0,41,263	0/0:7,0:7:18.82:0,19,131
chr10	1845679	.	TACACACAC	T	1073.56	PASS	AB=0.917;AC=9;AF=0.167;AN=54;BaseQRankSum=5.391;DP=463;FS=0.000;HRun=0;HaplotypeScore=117.8223;InbreedingCoeff=0.7190;MQ=66.07;MQ0=6;MQRankSum=-5.814;QD=16.77;ReadPosRankSum=-0.876;VQSLOD=2.0530;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:25.83:0,26,740	0/0:6,0:6:12.03:0,12,375	0/0:21,0:12:0:0,0,0	./.	0/0:16,0:20:40:0,40,1187	0/0:26,0:27:45.15:0,45,1462	0/0:10,0:10:24.08:0,24,890	0/0:18,0:19:17.44:0,17,371	1/1:12,0:12:18.06:332,18,0	0/0:14,0:14:20.66:0,21,666	0/0:13,0:12:21.07:0,21,703	0/0:10,0:10:21.96:0,22,748	0/0:10,0:11:18.04:0,18,572	0/0:14,0:16:36.11:0,36,1043	0/0:12,0:14:21.07:0,21,639	0/0:13,0:13:18.06:0,18,592	0/0:16,0:27:30.10:0,30,1016	0/0:10,0:11:16.61:0,17,418	0/0:24,0:24:30.10:0,30,1044	0/0:5,0:5:3.01:0,3,96	0/0:21,0:21:30.08:0,30,902	0/0:4,0:4:6.02:0,6,178	0/1:10,1:11:46.55:47,0,500	0/0:25,0:28:48.16:0,48,1709	0/0:23,0:24:51.39:0,51,1423	1/1:6,5:11:12.01:249,12,0	1/1:11,12:23:13.32:445,13,0	1/1:5,2:7:6.02:151,6,0
chr10	1845708	.	ACACACACACACACC	A	643.21	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.564;DP=488;FS=0.000;HRun=0;HaplotypeScore=170.6090;InbreedingCoeff=0.8819;MQ=56.26;MQ0=8;MQRankSum=-1.855;QD=53.60;ReadPosRankSum=0.490;VQSLOD=3.2987;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:49.03:0,49,1529	0/0:4,0:4:12.04:0,12,726	0/0:21,0:10:17.17:0,17,216	0/0:27,0:15:37.48:0,37,615	0/0:26,0:25:52.68:0,53,2507	0/0:27,0:27:63.13:0,63,2917	0/0:18,0:17:48.12:0,48,2013	0/0:22,0:21:57.07:0,57,1538	1/1:7,5:12:27.47:737,27,0	0/0:16,0:15:45.05:0,45,1629	0/0:13,0:12:33.05:0,33,1503	0/0:16,0:16:43.64:0,44,1934	0/0:10,0:10:26.75:0,27,1200	0/0:16,0:16:48.15:0,48,2208	0/0:18,0:18:48.09:0,48,1623	0/0:12,0:12:33.09:0,33,1434	0/0:26,0:26:54.17:0,54,2515	0/0:13,0:12:25.63:0,26,1001	0/0:20,0:20:58.18:0,58,2030	0/0:8,0:8:18.01:0,18,513	0/0:26,0:26:69.20:0,69,2812	0/0:5,0:5:13.60:0,14,626	0/0:13,0:13:34.65:0,35,1331	0/0:27,0:27:66.18:0,66,3580	0/0:24,0:24:70.46:0,70,3148	0/0:15,0:15:39.04:0,39,599	0/0:21,0:21:42.68:0,43,495	0/0:3,0:3:9.01:0,9,91
chr10	1845976	.	CTCTCT	C	1172.65	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=2.603;DP=342;FS=5.799;HRun=0;HaplotypeScore=72.6826;InbreedingCoeff=0.8361;MQ=68.74;MQ0=5;MQRankSum=0.700;QD=33.50;ReadPosRankSum=1.979;VQSLOD=2.9400;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,11:13:21.07:429,21,0	0/0:4,0:4:12.04:0,12,327	0/0:17,0:11:14.71:0,15,459	0/0:18,0:13:27.96:0,28,530	0/0:17,0:17:42.60:0,43,1039	0/0:22,0:22:66.21:0,66,1718	0/0:6,0:6:18.05:0,18,420	0/0:32,0:27:81.27:0,81,1364	0/0:6,0:6:18.06:0,18,299	0/0:14,0:14:42.14:0,42,1120	0/0:12,0:12:33.11:0,33,873	0/0:6,0:6:18.03:0,18,328	0/0:4,0:4:12.02:0,12,300	0/0:3,0:3:9.03:0,9,192	0/0:8,0:8:18.04:0,18,341	0/0:8,0:8:24.01:0,24,593	1/1:1,21:21:39.13:864,39,0	0/0:12,0:12:33.53:0,34,781	0/0:23,0:23:66.22:0,66,1689	0/0:7,0:7:15.05:0,15,334	0/0:8,0:8:24.08:0,24,702	0/0:3,0:3:8.98:0,9,187	0/0:2,0:2:6.02:0,6,168	0/0:9,0:9:24.07:0,24,634	0/0:21,0:21:63.14:0,63,1364	0/0:24,0:23:53.92:0,54,1002	0/0:14,0:14:39.13:0,39,638	0/0:7,0:7:18.06:0,18,290
chr10	1845980	.	CT	C	1516.60	PASS	AB=0.910;AC=16;AF=0.286;AN=56;BaseQRankSum=10.359;DP=349;FS=0.496;HRun=11;HaplotypeScore=49.7234;InbreedingCoeff=0.6852;MQ=69.28;MQ0=7;MQRankSum=-1.750;QD=10.39;ReadPosRankSum=2.110;VQSLOD=2.4712;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:11:17.11:92,17,0	0/0:4,0:4:9.01:0,9,87	0/0:19,0:11:6.22:0,6,109	0/1:16,1:12:7.84:8,0,100	0/0:19,0:19:30.54:0,31,319	0/0:22,0:22:63.14:0,63,661	0/0:6,0:6:12.02:0,12,122	1/1:13,23:29:58.69:443,59,0	1/1:1,5:6:14.98:123,15,0	0/0:15,0:15:36.08:0,36,376	0/0:11,1:12:2.24:0,2,205	0/0:4,0:4:9.01:0,9,88	0/0:4,0:4:12:0,12,112	0/0:5,0:5:6.01:0,6,63	0/0:5,0:5:9.02:0,9,95	0/0:9,0:9:18.03:0,18,185	1/1:21,1:21:36.93:186,37,0	0/0:13,0:13:30.02:0,30,306	0/0:21,0:21:54.09:0,54,550	0/1:6,1:7:12.62:13,0,83	0/0:8,0:8:18.05:0,18,192	0/0:2,0:2:3.01:0,3,32	0/0:2,0:2:3.01:0,3,32	0/0:8,0:8:17.93:0,18,158	0/0:25,0:25:57.05:0,57,574	1/1:5,21:25:56.34:436,56,0	1/1:4,10:14:32.83:260,33,0	1/1:0,7:7:17.98:148,18,0
chr10	1846247	.	GGTGTGTGTGTGTGTGTGTGTGT	G	529.78	PASS	AB=0.974;AC=4;AF=0.071;AN=56;BaseQRankSum=3.745;DP=494;FS=2.315;HRun=0;HaplotypeScore=227.4655;InbreedingCoeff=0.4116;MQ=65.20;MQ0=33;MQRankSum=-3.422;QD=9.63;ReadPosRankSum=0.857;VQSLOD=2.1967;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:11,4:13:2.96:0,3,19	0/0:9,0:9:15.03:0,15,974	0/0:44,0:21:6.02:0,6,190	0/0:57,0:25:18.83:0,19,377	0/0:14,0:14:12.04:0,12,751	0/0:18,0:15:9.03:0,9,448	0/0:19,0:16:15.04:0,15,864	0/1:20,0:19:0:0,0,0	1/1:14,0:15:6.02:303,6,0	0/0:17,0:16:24.08:0,24,1687	0/0:8,0:7:15.05:0,15,1167	0/0:15,0:15:18.48:0,18,459	0/0:8,0:8:11.99:0,12,758	0/0:19,0:19:24.08:0,24,1218	0/0:14,0:14:15.05:0,15,1189	0/0:14,0:14:21.07:0,21,1390	0/1:17,1:17:99:320,0,111	0/0:14,0:13:18.06:0,18,1242	0/0:12,0:10:0:0,0,0	0/0:13,0:13:23.58:0,24,1808	0/0:28,0:28:33.10:0,33,1957	0/0:7,0:7:18.06:0,18,1412	0/0:10,0:9:18.06:0,18,947	0/0:23,0:20:27.52:0,28,1290	0/0:9,0:8:9.03:0,9,703	0/0:21,0:22:27.98:0,28,891	0/0:15,0:16:21.07:0,21,641	0/0:10,0:8:5.21:0,5,31
chr10	1847484	.	C	CTT	978.43	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=12.889;DP=688;FS=1.091;HRun=1;HaplotypeScore=116.4238;InbreedingCoeff=0.7972;MQ=86.95;MQ0=0;MQRankSum=-11.723;QD=13.22;ReadPosRankSum=-0.210;VQSLOD=0.3938;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:32,0:32:3.27:52,3,0	0/0:6,0:6:18.03:0,18,251	0/0:28,0:28:67.13:0,67,1021	0/0:29,0:29:77.58:0,78,1032	0/0:33,0:33:99:0,99,1423	0/0:23,0:23:63.21:0,63,964	0/0:24,0:24:69.20:0,69,1010	0/0:21,0:21:25.42:0,25,203	1/1:9,17:26:78.09:1012,78,0	0/0:31,0:31:90.18:0,90,1293	0/0:21,0:21:63.20:0,63,940	0/0:27,0:27:75.21:0,75,1082	0/0:28,0:28:81.25:0,81,1211	0/0:26,0:26:77.89:0,78,1093	0/0:27,0:27:81.25:0,81,1197	0/0:16,1:17:9.41:0,9,672	0/1:16,0:16:0.47:33,0,0	0/0:13,0:13:35.25:0,35,527	0/0:26,0:26:78.19:0,78,1073	0/0:30,0:30:90.26:0,90,1313	0/0:33,0:33:99:0,99,1427	0/0:26,0:26:75.20:0,75,1100	0/0:22,0:22:66.18:0,66,944	0/0:19,0:19:54.17:0,54,804	0/0:19,0:19:57.18:0,57,850	0/0:47,0:47:99:0,141,2056	0/0:27,0:26:81.20:0,81,1127	0/0:11,0:11:33.01:0,33,432
chr10	1847488	.	C	CATGAGT	6012.55	PASS	AB=0.974;AC=10;AF=0.179;AN=56;BaseQRankSum=13.621;DP=684;FS=0.000;HRun=0;HaplotypeScore=162.7215;InbreedingCoeff=0.7438;MQ=87.16;MQ0=0;MQRankSum=-13.058;QD=48.49;ReadPosRankSum=-0.955;VQSLOD=4.6339;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:29:72.25:1936,72,0	0/0:5,0:5:15.05:0,15,384	0/0:27,0:27:66.21:0,66,1695	0/0:30,0:30:78.27:0,78,1783	0/0:32,0:32:96.32:0,96,2307	0/0:23,0:23:66.23:0,66,1656	0/0:24,0:24:72.23:0,72,1695	1/1:22,0:22:11.42:1156,11,0	1/1:10,17:27:45.19:1970,45,0	0/0:27,0:27:81.28:0,81,2041	0/0:21,0:21:63.22:0,63,1587	0/0:24,0:24:72.25:0,72,1809	0/0:29,0:29:84.29:0,84,2148	0/0:26,0:26:72.24:0,72,1733	0/0:29,0:29:84.28:0,84,2076	0/1:17,1:18:42.07:42,0,1201	1/1:15,0:15:36.12:866,36,0	0/1:13,0:13:42.02:42,0,830	0/0:26,0:26:78.27:0,78,1912	0/0:35,0:35:99:0,99,2353	0/0:33,0:33:99:0,99,2509	0/0:26,0:26:78.26:0,78,1885	0/0:21,0:21:63.22:0,63,1588	0/0:20,0:20:57.18:0,57,1408	0/0:20,0:20:57.20:0,57,1458	0/0:47,0:47:99:0,135,3282	0/0:24,0:23:72.23:0,72,1793	0/0:11,0:11:33.11:0,33,830
chr10	1847489	.	T	TC	1512.11	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=13.224;DP=668;FS=0.988;HRun=1;HaplotypeScore=98.1262;InbreedingCoeff=0.9550;MQ=87.06;MQ0=0;MQRankSum=-11.375;QD=19.90;ReadPosRankSum=-0.116;VQSLOD=3.6863;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,23:26:68.01:581,68,0	0/0:5,0:5:15.05:0,15,210	0/0:25,0:25:72.17:0,72,938	0/0:30,0:30:81.19:0,81,1015	0/0:31,0:31:93.29:0,93,1279	0/0:23,0:23:66.22:0,66,922	0/0:25,0:25:72.24:0,72,996	1/1:6,8:14:8.18:297,8,0	1/1:22,1:23:41.25:551,41,0	0/0:27,0:27:81.26:0,81,1110	0/0:21,0:21:63.21:0,63,880	0/0:25,0:25:72.23:0,72,988	0/0:32,0:32:87.27:0,87,1197	0/0:24,0:24:72.21:0,72,970	0/0:29,0:29:87.28:0,87,1196	0/0:19,0:19:26.76:0,27,683	1/1:2,11:13:29.01:238,29,0	0/0:11,1:12:7.77:0,8,433	0/0:26,0:26:78.26:0,78,1084	0/0:36,0:36:99:0,105,1424	0/0:33,0:33:99:0,99,1380	0/0:25,0:25:75.25:0,75,1046	0/0:22,0:22:63.21:0,63,878	0/0:20,0:20:60.18:0,60,818	0/0:20,0:20:60.16:0,60,816	0/0:47,0:47:99:0,138,1880	0/0:24,0:23:72.24:0,72,1001	0/0:11,0:11:30.10:0,30,417
chr10	1847490	.	A	ATGAGTTG	7817.60	PASS	AB=0.962;AC=10;AF=0.179;AN=56;BaseQRankSum=12.612;DP=692;FS=3.041;HRun=0;HaplotypeScore=170.5901;InbreedingCoeff=0.7534;MQ=85.73;MQ0=0;MQRankSum=-13.497;QD=60.60;ReadPosRankSum=-1.898;VQSLOD=4.4755;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,23:31:81.07:2461,81,0	0/0:5,0:5:15.05:0,15,419	0/0:25,0:25:72.11:0,72,1824	0/0:30,0:30:78.23:0,78,1889	0/0:30,0:30:90.29:0,90,2402	0/0:23,0:23:66.23:0,66,1786	0/0:25,0:25:75.24:0,75,1873	1/1:16,8:24:66.15:1870,66,0	1/1:24,0:25:72.18:2242,72,0	0/0:26,0:26:78.27:0,78,2169	0/0:21,0:21:63.22:0,63,1718	0/0:24,0:24:72.22:0,72,1951	0/0:32,0:32:96.22:0,96,2437	0/0:24,0:24:69.21:0,69,1805	0/0:29,0:29:87.28:0,87,2298	0/1:19,0:19:47.99:48,0,1356	1/1:7,11:18:41.99:1127,42,0	0/1:11,1:12:70:70,0,886	0/0:29,0:29:81.26:0,81,2087	0/0:36,0:36:99:0,108,2668	0/0:33,0:33:99:0,99,2726	0/0:25,0:25:75.24:0,75,1978	0/0:24,0:24:66.19:0,66,1724	0/0:20,0:20:60.19:0,60,1582	0/0:21,0:21:60.19:0,60,1601	0/0:46,0:46:99:0,138,3551	0/0:24,0:23:72.25:0,72,1972	0/0:11,0:11:33.11:0,33,921
chr10	1847717	.	A	AT	1860.01	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-10.132;DP=627;FS=8.521;HRun=9;HaplotypeScore=61.3548;InbreedingCoeff=0.9391;MQ=71.04;MQ0=0;MQRankSum=-0.577;QD=22.68;ReadPosRankSum=0.496;VQSLOD=4.3509;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:32:82.44:0,82,721	0/0:14,0:14:35.99:0,36,313	0/0:12,0:11:2.96:0,3,71	0/0:14,0:14:23.94:0,24,202	0/0:28,0:28:62.91:0,63,541	0/0:28,0:29:73.97:0,74,619	0/0:17,0:17:41.94:0,42,357	0/0:36,0:36:98.95:0,99,855	0/0:18,0:18:35.98:0,36,313	0/0:25,0:25:59.83:0,60,509	0/0:18,0:18:44.98:0,45,388	0/0:12,0:12:29.99:0,30,260	0/0:22,0:22:59.96:0,60,516	0/0:24,0:24:59.94:0,60,513	0/0:27,0:27:74.95:0,75,644	0/0:21,0:21:56.97:0,57,493	0/0:29,0:29:80.96:0,81,698	0/0:12,0:13:31.20:0,31,265	0/0:19,0:19:53.96:0,54,460	0/0:26,0:26:68.94:0,69,593	0/0:15,0:15:35.96:0,36,308	0/0:24,0:24:62.98:0,63,547	0/0:27,0:27:77.85:0,78,657	0/0:18,0:18:47.98:0,48,417	0/0:24,0:24:62.94:0,63,540	1/1:9,30:39:67.15:941,67,0	1/1:3,17:20:44.99:498,45,0	1/1:3,20:23:51.14:564,51,0
chr10	1848745	.	C	CT	405.36	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-3.950;DP=533;FS=3.169;HRun=9;HaplotypeScore=184.3457;InbreedingCoeff=0.9737;MQ=75.65;MQ0=1;MQRankSum=-4.164;QD=17.62;ReadPosRankSum=-3.226;VQSLOD=1.3067;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:39:94.94:0,95,804	0/0:6,0:7:20.04:0,20,164	0/0:21,0:21:29.83:0,30,326	0/0:17,0:16:33.11:0,33,295	0/0:25,0:25:56.91:0,57,485	0/0:14,0:14:32.99:0,33,286	0/0:27,0:27:71.99:0,72,626	1/1:8,14:23:47.94:500,48,0	0/0:27,0:27:74.98:0,75,651	0/0:20,0:21:59.02:0,59,499	0/0:22,0:23:56:0,56,475	0/0:15,0:15:41.98:0,42,362	0/0:10,0:10:20.97:0,21,182	0/0:10,0:10:23.98:0,24,208	0/0:25,0:25:56.94:0,57,492	0/0:13,0:13:29.98:0,30,260	0/0:24,0:24:65.91:0,66,560	0/0:16,0:16:38.99:0,39,339	0/0:11,0:12:29.01:0,29,236	0/0:18,0:19:47.01:0,47,397	0/0:12,0:11:17.81:0,18,156	0/0:19,0:19:41.97:0,42,365	0/0:28,1:30:32.81:0,33,510	0/0:20,0:20:35.99:0,36,312	0/0:13,0:13:32.03:0,32,266	0/0:26,0:26:47.96:0,48,417	0/0:18,0:17:44.85:0,45,390	0/0:7,0:7:21:0,21,183
chr10	1849892	.	GTATA	G	4847.19	PASS	AB=0.591;AC=13;AF=0.232;AN=56;BaseQRankSum=10.296;DP=385;FS=4.148;HRun=0;HaplotypeScore=65.3979;InbreedingCoeff=0.8044;MQ=66.60;MQ0=2;MQRankSum=-1.329;QD=35.91;ReadPosRankSum=1.836;VQSLOD=4.6467;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,24:29:51.17:875,51,0	0/0:5,0:7:17.85:0,18,390	0/0:5,0:5:2.74:0,3,12	0/0:5,0:4:2.64:0,3,62	0/0:30,0:30:80.79:0,81,1750	0/0:16,0:17:44.93:0,45,1019	0/0:9,0:9:18.06:0,18,436	1/1:4,10:14:33.06:486,33,0	1/1:2,17:19:51.17:875,51,0	0/0:20,0:22:50.96:0,51,1192	0/0:15,0:17:47.95:0,48,1112	0/0:9,0:9:24.08:0,24,604	0/0:10,0:10:24.08:0,24,601	0/0:15,0:15:41.85:0,42,1005	0/0:9,0:10:26.88:0,27,608	0/0:9,0:9:24.08:0,24,555	1/1:0,13:12:27.09:463,27,0	0/0:5,0:5:12.04:0,12,264	0/0:21,0:23:53.96:0,54,1214	0/0:11,0:11:22.32:0,22,496	0/0:7,0:7:18.06:0,18,453	0/0:5,0:5:12.04:0,12,291	0/0:11,0:11:33.11:0,33,781	0/0:8,0:8:12.04:0,12,302	0/0:14,0:14:36.12:0,36,901	0/1:8,18:26:99:861,0,163	1/1:3,26:29:66.23:1132,66,0	1/1:2,3:5:9.03:154,9,0
chr10	1850391	.	T	TGTGTC	8434.98	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=14.503;DP=714;FS=4.955;HRun=0;HaplotypeScore=143.2897;InbreedingCoeff=0.9986;MQ=81.50;MQ0=0;MQRankSum=-15.493;QD=75.31;ReadPosRankSum=-1.199;VQSLOD=6.3014;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,25:37:81.28:2373,81,0	0/0:8,0:8:24.08:0,24,535	0/0:30,0:29:87.28:0,87,1790	0/0:29,0:29:72.36:0,72,1426	0/0:27,0:27:81.26:0,81,1746	0/0:16,0:16:48.16:0,48,1070	0/0:17,0:17:51.18:0,51,1135	1/1:12,16:28:81.23:2296,81,0	1/1:2,28:31:84.29:2541,84,0	0/0:26,0:26:75.26:0,75,1673	0/0:25,0:25:69.24:0,69,1519	0/0:25,0:25:75.24:0,75,1588	0/0:33,0:33:99:0,99,2208	0/0:17,0:17:48.15:0,48,1029	0/0:32,0:32:96.33:0,96,2140	0/0:33,0:33:99:0,99,2165	1/1:3,13:16:38.87:1225,39,0	0/0:8,0:8:24.08:0,24,535	0/0:20,0:20:60.21:0,60,1338	0/0:44,0:44:99:0,126,2810	0/0:48,0:48:99:0,141,3100	0/0:26,0:26:72.23:0,72,1548	0/0:20,0:20:60.19:0,60,1296	0/0:28,0:28:84.26:0,84,1789	0/0:18,0:18:51.17:0,51,1116	0/0:28,0:28:84.28:0,84,1817	0/0:34,0:34:99:0,102,2102	0/0:9,0:9:27.09:0,27,602
chr10	1851115	.	TATC	T	854.35	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.384;DP=524;FS=2.099;HRun=0;HaplotypeScore=76.0377;InbreedingCoeff=0.9897;MQ=87.34;MQ0=0;MQRankSum=-2.879;QD=38.83;ReadPosRankSum=2.014;VQSLOD=4.3278;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:72.25:0,72,1632	0/0:6,0:6:18.06:0,18,408	0/0:25,0:25:72.05:0,72,1369	0/0:12,0:12:33.07:0,33,612	0/0:12,0:12:36.12:0,36,792	0/0:26,0:26:78.25:0,78,1723	0/0:10,0:10:27.09:0,27,612	0/0:23,0:23:69.24:0,69,1524	1/1:1,21:22:57.19:949,57,0	0/0:20,0:20:57.18:0,57,1186	0/0:19,0:19:57.20:0,57,1274	0/0:21,0:21:57.18:0,57,1229	0/0:31,0:31:87.30:0,87,1951	0/0:18,0:18:54.19:0,54,1223	0/0:27,0:27:78.27:0,78,1763	0/0:23,0:23:69.24:0,69,1564	0/0:14,0:14:42.14:0,42,887	0/0:10,0:10:30.10:0,30,680	0/0:14,0:14:42.14:0,42,911	0/0:21,0:21:60.21:0,60,1359	0/0:18,0:18:54.13:0,54,1130	0/0:15,0:15:42.14:0,42,910	0/0:14,0:14:38.90:0,39,861	0/0:23,0:23:60.63:0,61,1286	0/0:18,0:18:54.16:0,54,1179	0/0:12,0:12:36.12:0,36,816	0/0:34,0:34:99:0,99,2217	0/0:11,0:11:33.11:0,33,748
chr10	1851342	.	TC	T	1101.31	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-1.817;DP=446;FS=7.126;HRun=4;HaplotypeScore=183.6979;InbreedingCoeff=0.9728;MQ=53.07;MQ0=1;MQRankSum=-4.327;QD=22.03;ReadPosRankSum=-0.707;VQSLOD=1.5852;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,31:35:40.57:810,41,0	0/0:7,0:7:21.07:0,21,294	0/0:12,0:9:26.68:0,27,339	0/0:11,0:7:18.02:0,18,195	0/0:23,0:23:60.11:0,60,805	0/0:21,0:21:57.19:0,57,796	0/0:9,0:9:24.08:0,24,335	0/0:26,0:23:62.91:0,63,823	0/0:11,0:11:33.09:0,33,429	0/0:18,0:18:54.13:0,54,712	0/0:16,0:16:42.07:0,42,557	0/0:17,0:17:51.17:0,51,713	0/0:12,0:12:30.10:0,30,418	0/0:9,0:9:24.08:0,24,335	0/0:16,0:16:48.15:0,48,655	0/0:12,0:12:30.10:0,30,419	1/1:0,15:15:35.84:413,36,0	0/0:21,0:20:54.16:0,54,731	0/0:13,0:13:33.09:0,33,444	0/0:24,0:24:63.14:0,63,848	0/0:25,0:25:50.96:0,51,712	0/0:10,0:10:24.08:0,24,334	0/0:15,0:15:42.14:0,42,573	0/0:17,0:17:48.12:0,48,649	0/0:22,0:22:63.13:0,63,840	0/0:8,0:8:24.08:0,24,336	0/0:15,0:15:39.10:0,39,524	0/0:6,0:6:12.03:0,12,151
chr10	1851759	.	G	GAT	2330.25	PASS	AB=0.560;AC=5;AF=0.089;AN=56;BaseQRankSum=-5.723;DP=592;FS=4.195;HRun=0;HaplotypeScore=79.0402;InbreedingCoeff=0.7480;MQ=62.89;MQ0=0;MQRankSum=-0.398;QD=30.26;ReadPosRankSum=1.437;VQSLOD=5.2981;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,22:31:23.01:897,23,0	0/0:9,0:9:21.07:0,21,258	0/0:7,0:5:8.94:0,9,78	0/0:23,0:19:13.75:0,14,181	0/0:28,0:28:66.21:0,66,818	0/0:25,0:27:63.03:0,63,758	0/0:18,0:19:47.98:0,48,572	0/0:20,0:20:54.15:0,54,649	0/1:6,21:28:8.18:903,0,8	0/0:21,0:21:39.12:0,39,484	0/0:19,0:19:48.13:0,48,574	0/0:27,0:28:75.05:0,75,894	0/0:22,0:23:57:0,57,671	0/0:20,0:21:57.01:0,57,681	0/0:21,0:21:54.17:0,54,670	0/0:26,0:27:66.04:0,66,795	1/1:3,15:18:7.95:652,8,0	0/0:12,0:12:27.05:0,27,318	0/0:15,0:14:29.82:0,30,334	0/0:16,0:17:41.95:0,42,484	0/0:20,0:23:56.67:0,57,637	0/0:26,0:26:60.16:0,60,718	0/0:21,0:21:42.13:0,42,518	0/0:17,0:18:35.12:0,35,494	0/0:29,0:30:72.01:0,72,840	0/0:16,0:16:45.12:0,45,544	0/0:35,0:35:81.22:0,81,978	0/0:8,0:8:24.08:0,24,298
chr10	1852577	.	CT	C	1043.85	PASS	AB=0.908;AC=8;AF=0.143;AN=56;BaseQRankSum=4.413;DP=487;FS=19.718;HRun=11;HaplotypeScore=53.5957;InbreedingCoeff=0.6785;MQ=60.35;MQ0=7;MQRankSum=0.586;QD=9.58;ReadPosRankSum=0.679;VQSLOD=0.7536;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,21:25:50.93:419,51,0	0/0:10,0:10:18.04:0,18,189	0/0:22,0:9:9.14:0,9,148	0/0:16,0:8:3.80:0,4,93	0/0:18,0:18:30.07:0,30,317	0/0:14,0:13:30.07:0,30,317	0/0:18,0:18:39.10:0,39,414	0/1:25,3:29:6.31:6,0,517	1/1:2,15:16:32.95:271,33,0	0/0:24,0:24:53.46:0,53,534	0/0:14,1:15:2.67:0,3,315	0/0:11,0:11:20.91:0,21,248	0/0:10,0:10:18.04:0,18,188	0/0:8,0:8:21.05:0,21,222	0/0:14,1:16:14.38:0,14,334	0/1:9,1:10:0.59:1,0,194	1/1:5,23:25:59.93:492,60,0	0/0:11,0:11:21.03:0,21,215	0/0:23,0:21:35.21:0,35,409	0/0:21,0:20:45:0,45,450	0/0:16,0:16:39.08:0,39,407	0/0:13,1:14:11.40:0,11,304	0/0:21,0:21:40.33:0,40,409	0/0:15,0:14:39.10:0,39,416	0/0:19,0:18:41.93:0,42,422	0/0:8,0:19:37.62:0,38,206	0/0:5,0:23:43.03:0,43,242	0/0:3,0:11:22.88:0,23,124
chr10	1853781	.	G	GA	3687.43	PASS	AB=0.521;AC=13;AF=0.232;AN=56;BaseQRankSum=-3.288;DP=569;FS=13.387;HRun=0;HaplotypeScore=48.7181;InbreedingCoeff=0.8921;MQ=52.61;MQ0=4;MQRankSum=-4.674;QD=29.74;ReadPosRankSum=0.067;VQSLOD=2.4261;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,21:20:39.13:622,39,0	0/0:9,0:9:27.09:0,27,378	0/0:32,0:20:39.32:0,39,639	0/0:19,0:12:25.84:0,26,297	0/0:23,0:23:63.21:0,63,881	0/0:28,0:28:78.26:0,78,1083	0/0:15,0:15:42.14:0,42,581	1/1:4,6:6:15.05:225,15,0	1/1:1,20:15:33.11:527,33,0	0/0:29,0:29:87.29:0,87,1217	0/0:26,0:26:75.25:0,75,1048	0/0:23,1:24:18.83:0,19,816	0/0:17,0:17:39.13:0,39,545	0/0:17,0:17:45.15:0,45,623	0/0:21,0:21:60.20:0,60,839	0/0:20,0:20:42.14:0,42,579	1/1:0,15:10:21.07:335,21,0	0/0:17,0:17:25.11:0,25,545	0/0:25,0:25:75.25:0,75,1048	0/0:31,0:31:93.28:0,93,1266	0/0:9,0:9:15.05:0,15,210	0/0:19,0:19:54.17:0,54,738	0/0:28,0:28:78.26:0,78,1089	0/0:15,0:15:30.10:0,30,420	0/0:20,0:20:60.18:0,60,806	0/1:2,23:22:17.71:876,0,18	1/1:0,21:19:45.15:718,45,0	1/1:1,10:10:24.08:383,24,0
chr10	1854798	.	A	AAGAC	5310.84	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-0.997;DP=614;FS=0.469;HRun=0;HaplotypeScore=100.0219;InbreedingCoeff=0.9990;MQ=58.11;MQ0=5;MQRankSum=-4.474;QD=52.58;ReadPosRankSum=1.525;VQSLOD=5.9268;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,26:34:75.03:1947,75,0	0/0:11,0:11:27.09:0,27,497	0/0:23,0:19:57.17:0,57,976	0/0:27,0:24:57.18:0,57,1019	0/0:21,0:21:63.21:0,63,1130	0/0:24,0:24:60.16:0,60,1062	0/0:14,0:13:33.07:0,33,565	1/1:7,11:18:42.08:835,42,0	1/1:1,17:18:45.15:1185,45,0	0/0:27,0:27:81.26:0,81,1407	0/0:23,0:23:66.23:0,66,1198	0/0:21,0:20:54.18:0,54,965	0/0:25,0:24:69.24:0,69,1269	0/0:23,0:23:69.18:0,69,1194	0/0:24,0:24:69.19:0,69,1234	0/0:26,0:26:72.22:0,72,1265	1/1:3,25:29:51.18:1344,51,0	0/0:15,0:15:33.11:0,33,583	0/0:19,0:18:42.14:0,42,740	0/0:34,0:34:96.31:0,96,1706	0/0:19,0:19:54.19:0,54,981	0/0:19,0:19:51.13:0,51,895	0/0:22,0:22:63.17:0,63,1117	0/0:15,0:15:45.15:0,45,828	0/0:18,0:18:45.15:0,45,828	0/0:19,0:19:48.16:0,48,882	0/0:35,0:35:93.25:0,93,1607	0/0:9,0:9:24.08:0,24,425
chr10	1855786	.	G	GA	3570.58	PASS	AC=12;AF=0.231;AN=52;BaseQRankSum=-9.665;DP=213;FS=4.199;HRun=6;HaplotypeScore=20.7469;InbreedingCoeff=0.7857;MQ=73.63;MQ0=0;MQRankSum=1.117;QD=34.01;ReadPosRankSum=-1.269;VQSLOD=2.2993;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,13:13:39.12:482,39,0	0/0:2,0:2:3.01:0,3,31	0/0:7,0:6:8.96:0,9,76	./.	0/0:6,0:6:15.03:0,15,153	0/0:10,0:10:30.07:0,30,306	0/0:4,0:4:12.03:0,12,122	1/1:3,35:38:99:1277,102,0	0/0:2,0:2:6.01:0,6,61	0/0:5,0:5:12.02:0,12,122	0/0:9,0:9:24.05:0,24,245	0/0:5,0:5:15.03:0,15,153	0/0:5,0:5:12.03:0,12,122	0/0:4,0:4:12.01:0,12,116	0/0:2,0:2:6.01:0,6,61	0/0:2,0:2:3.01:0,3,31	1/1:0,20:20:54.17:679,54,0	0/0:14,0:14:38.92:0,39,381	0/0:13,0:13:36.07:0,36,361	0/0:2,0:2:6.01:0,6,61	0/0:5,0:5:12.02:0,12,122	0/0:2,0:2:6.01:0,6,61	0/0:2,0:2:6.01:0,6,61	./.	0/0:5,0:5:12.03:0,12,122	1/1:0,9:9:27.09:340,27,0	1/1:2,15:17:42.13:528,42,0	1/1:0,8:8:21.07:264,21,0
chr10	1856842	.	G	GA	2118.14	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-9.044;DP=396;FS=13.556;HRun=5;HaplotypeScore=39.3048;InbreedingCoeff=0.9710;MQ=88.76;MQ0=0;MQRankSum=-2.108;QD=33.10;ReadPosRankSum=0.428;VQSLOD=2.5904;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:42.04:0,42,437	0/0:4,0:4:12.03:0,12,129	0/0:22,0:21:54.13:0,54,571	0/0:18,0:18:45.10:0,45,474	0/0:11,0:11:30.07:0,30,322	0/0:16,0:16:45.09:0,45,475	0/0:12,0:12:30.07:0,30,322	0/0:33,0:33:99:0,99,1049	0/0:10,0:10:30.08:0,30,322	0/0:14,0:14:39.10:0,39,419	0/0:11,0:11:33.08:0,33,354	0/0:8,0:8:24.06:0,24,258	0/0:12,0:12:36.09:0,36,387	0/0:14,0:14:42.11:0,42,451	0/0:12,0:12:36.06:0,36,371	0/0:11,0:11:33.08:0,33,354	0/0:10,0:10:21.05:0,21,226	0/0:10,0:10:29.99:0,30,307	0/0:16,0:16:45.11:0,45,477	0/0:14,0:14:36.09:0,36,387	0/0:22,0:22:66.14:0,66,694	0/0:4,0:4:12.03:0,12,129	0/0:15,0:15:42.09:0,42,442	0/0:8,0:8:18.03:0,18,185	0/0:7,0:7:21.05:0,21,226	1/1:3,23:26:39.97:863,40,0	1/1:1,17:18:48.16:632,48,0	1/1:1,19:20:60.09:766,60,0
chr10	1859308	.	TTCC	T	5272.15	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=12.578;DP=435;FS=12.942;HRun=0;HaplotypeScore=62.5470;InbreedingCoeff=0.9918;MQ=64.86;MQ0=2;MQRankSum=-1.878;QD=42.18;ReadPosRankSum=0.512;VQSLOD=5.4594;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,20:21:57.15:888,57,0	0/0:6,0:6:18.06:0,18,395	0/0:14,0:10:15.04:0,15,279	0/0:12,0:11:30.10:0,30,624	0/0:13,0:13:39.13:0,39,857	0/0:22,0:22:60.21:0,60,1317	0/0:14,0:14:33.11:0,33,728	1/1:4,18:22:54.17:845,54,0	0/0:16,0:16:48.16:0,48,1060	0/0:17,0:17:48.16:0,48,1048	0/0:17,0:17:51.18:0,51,1126	0/0:10,0:10:30.10:0,30,662	0/0:7,0:7:21.07:0,21,464	0/0:8,0:8:24.08:0,24,530	0/0:13,0:13:36.12:0,36,795	0/0:17,0:17:48.16:0,48,1041	1/1:2,31:33:81.23:1273,81,0	0/0:18,0:18:48.15:0,48,1011	0/0:18,0:18:54.19:0,54,1186	0/0:16,0:16:48.16:0,48,1053	0/0:12,0:12:36.12:0,36,767	0/0:13,0:13:30.10:0,30,645	0/0:9,0:9:21.07:0,21,454	0/0:14,0:14:36.12:0,36,795	0/0:24,0:24:72.25:0,72,1576	1/1:1,21:22:63.21:1013,63,0	1/1:1,19:20:57.19:916,57,0	1/1:0,7:7:21.07:337,21,0
chr10	1859583	.	AT	A	1056.20	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.867;DP=490;FS=14.668;HRun=1;HaplotypeScore=52.6580;InbreedingCoeff=0.9439;MQ=81.56;MQ0=0;MQRankSum=0.447;QD=34.07;ReadPosRankSum=-3.784;VQSLOD=1.1649;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:84.13:0,84,1137	0/0:11,0:11:33.11:0,33,483	0/0:20,0:20:49.99:0,50,627	0/0:9,0:9:9.06:0,9,301	0/0:19,0:19:57.19:0,57,822	0/0:14,0:13:42.09:0,42,555	0/0:20,0:20:60.07:0,60,772	1/1:0,31:31:93.16:1151,93,0	0/0:15,0:15:45.12:0,45,619	0/0:18,0:18:54.16:0,54,756	0/0:16,0:16:48.15:0,48,681	0/0:18,0:18:51.17:0,51,742	0/0:20,0:20:60.18:0,60,839	0/0:12,0:12:36.11:0,36,508	0/0:18,0:18:54.13:0,54,712	0/0:14,0:14:42.14:0,42,614	0/0:17,0:17:51.10:0,51,686	0/0:13,0:13:39.10:0,39,547	0/0:12,0:12:36.06:0,36,452	0/0:29,0:29:84.27:0,84,1210	0/0:17,0:17:51.12:0,51,685	0/0:13,0:13:39.08:0,39,529	0/0:19,0:19:56.99:0,57,751	0/0:19,0:19:57.17:0,57,812	0/0:22,0:22:66.16:0,66,871	0/0:20,0:20:60.18:0,60,842	0/0:16,0:16:48.13:0,48,663	0/0:10,0:10:26.71:0,27,394
chr10	1860351	.	G	GTT	2843.33	PASS	AB=0.615;AC=13;AF=0.232;AN=56;BaseQRankSum=14.399;DP=620;FS=1.728;HRun=5;HaplotypeScore=90.4275;InbreedingCoeff=0.9332;MQ=73.38;MQ0=2;MQRankSum=-2.576;QD=17.88;ReadPosRankSum=-1.793;VQSLOD=0.2561;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,3:28:47.07:489,47,0	0/0:9,0:9:27.09:0,27,344	0/0:27,0:23:18.35:0,18,460	0/0:20,0:19:24.92:0,25,303	0/0:31,0:31:75.41:0,75,1020	0/0:22,0:22:66.18:0,66,812	0/0:15,0:15:45.14:0,45,573	1/1:11,0:28:33.92:323,34,0	0/1:6,0:15:1.42:178,0,1	0/0:34,0:34:96.28:0,96,1188	0/0:20,0:20:56.21:0,56,694	0/0:24,0:24:72.23:0,72,916	0/0:18,0:18:51.13:0,51,630	0/0:25,0:25:72.21:0,72,903	0/0:25,0:25:72.23:0,72,917	0/0:17,0:17:51.16:0,51,650	1/1:5,0:27:39.58:351,40,0	0/0:16,0:16:42.09:0,42,518	0/0:24,0:23:63.17:0,63,775	0/0:25,0:25:66.20:0,66,841	0/0:17,0:17:48.09:0,48,577	0/0:18,0:18:51.16:0,51,648	0/0:28,0:28:84.27:0,84,1070	0/0:21,0:21:60.18:0,60,750	0/0:23,0:23:69.19:0,69,849	1/1:1,19:21:54.01:660,54,0	1/1:2,27:30:56.21:880,56,0	1/1:4,3:7:10.75:151,11,0
chr10	1861121	.	C	CT	944.55	PASS	AB=0.912;AC=6;AF=0.107;AN=56;BaseQRankSum=-4.780;DP=433;FS=2.078;HRun=11;HaplotypeScore=50.2781;InbreedingCoeff=0.5349;MQ=68.89;MQ0=2;MQRankSum=-0.400;QD=10.49;ReadPosRankSum=0.601;VQSLOD=2.5307;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:9,26:35:10.41:591,10,0	0/0:7,0:8:17.92:0,18,139	0/0:13,0:10:18.95:0,19,120	0/1:11,1:10:13.93:14,0,59	0/0:15,0:14:35.52:0,36,277	0/0:17,0:17:44.80:0,45,345	0/0:13,0:13:20.79:0,21,153	0/0:30,0:31:35.10:0,35,357	0/0:6,0:6:11.93:0,12,91	0/0:30,0:31:73.71:0,74,560	0/0:12,0:12:14.39:0,14,113	0/0:10,0:10:23.87:0,24,182	0/0:10,0:10:20.61:0,21,179	0/0:13,0:13:29.85:0,30,228	0/0:15,0:15:35.84:0,36,279	0/0:8,0:8:20.90:0,21,160	1/1:6,19:25:45.09:456,45,0	0/0:15,0:15:41.84:0,42,325	0/0:20,0:21:45.90:0,46,335	0/0:24,0:25:46.43:0,46,338	0/0:4,0:4:5.97:0,6,46	0/0:6,0:6:5.96:0,6,46	0/0:12,0:12:23.88:0,24,186	0/0:3,0:3:8.95:0,9,68	0/0:16,0:15:32.86:0,33,255	0/0:26,0:26:56.71:0,57,437	0/1:16,2:18:12.93:13,0,272	0/0:9,0:10:25.93:0,26,190
chr10	1861749	.	AAT	A	38.32	PASS	AB=0.906;AC=4;AF=0.154;AN=26;BaseQRankSum=1.775;DP=169;FS=0.000;HRun=0;HaplotypeScore=22.4951;InbreedingCoeff=0.0523;MQ=86.36;MQ0=1;MQRankSum=1.693;QD=1.67;ReadPosRankSum=1.858;VQSLOD=0.5281;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:15,0:5:0:0,0,0	0/0:22,0:13:0.47:0,0,1	0/0:6,0:6:3.01:0,3,46	0/1:5,0:5:7.71:8,0,40	./.	0/0:9,0:9:12.03:0,12,147	./.	./.	./.	./.	0/0:7,0:7:2.37:0,2,8	0/0:7,0:7:3.01:0,3,41	0/0:7,0:7:3.01:0,3,43	1/1:4,1:5:3.01:34,3,0	0/0:8,0:8:3:0,3,26	0/1:10,3:13:79.49:79,0,131	0/0:4,0:3:3.01:0,3,42	0/0:5,0:5:3:0,3,25	./.	./.	./.	./.	./.	./.	./.	./.
chr10	1862320	.	G	GGT	723.52	PASS	AB=0.652;AC=7;AF=0.125;AN=56;BaseQRankSum=-2.618;DP=469;FS=1.701;HRun=0;HaplotypeScore=72.7074;InbreedingCoeff=0.5472;MQ=60.85;MQ0=8;MQRankSum=-0.672;QD=13.65;ReadPosRankSum=-1.501;VQSLOD=3.1048;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:26:28.88:0,29,140	0/0:6,0:6:18.05:0,18,206	0/0:24,0:8:2.98:0,3,21	0/0:15,0:7:2.18:0,2,6	0/0:25,0:26:42.84:0,43,462	0/0:26,1:28:10.61:0,11,520	0/0:12,0:12:5.06:0,5,210	0/0:23,0:23:33.03:0,33,347	1/1:8,0:9:3:26,3,0	0/0:21,0:22:47.95:0,48,515	0/0:26,0:26:32.22:0,32,592	0/0:4,0:4:9.03:0,9,103	0/0:12,0:13:29.92:0,30,323	0/0:12,0:12:20.89:0,21,220	0/0:16,0:16:36.09:0,36,403	0/0:14,0:15:35.89:0,36,376	0/0:25,0:25:31.40:0,31,163	0/0:28,0:29:53.98:0,54,597	0/0:13,0:14:7.98:0,8,199	0/0:18,0:19:41.94:0,42,449	0/0:13,0:13:18.05:0,18,206	0/0:9,0:12:20.69:0,21,220	0/0:10,0:10:21.04:0,21,229	0/0:9,0:10:17.88:0,18,186	0/0:14,0:15:23.88:0,24,243	1/1:8,8:20:2.10:379,2,0	0/1:7,8:15:10.14:300,0,10	1/1:5,4:9:9.03:139,9,0
chr10	1862323	.	GT	G	145.83	PASS	AB=0.675;AC=2;AF=0.036;AN=56;BaseQRankSum=7.661;DP=470;FS=0.000;HRun=1;HaplotypeScore=64.9770;InbreedingCoeff=-0.0417;MQ=59.68;MQ0=8;MQRankSum=-2.766;QD=3.04;ReadPosRankSum=2.523;VQSLOD=-0.3322;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:14,12:25:99:127,0,102	0/0:7,0:7:21.07:0,21,325	0/0:25,0:9:27.09:0,27,347	0/0:17,0:9:9.35:0,9,150	0/0:25,0:25:73.75:0,74,1015	0/0:29,0:29:81.27:0,81,1205	0/0:11,0:11:30.01:0,30,419	0/0:23,0:23:69.20:0,69,968	0/0:9,0:9:12.03:0,12,152	0/0:22,0:22:64.77:0,65,971	0/0:25,0:25:66.22:0,66,1019	0/0:4,0:4:12.04:0,12,182	0/0:12,0:12:34.67:0,35,512	0/0:12,0:12:31.55:0,32,443	0/0:16,0:16:42.14:0,42,661	0/0:15,0:15:43.68:0,44,612	0/1:11,11:22:99:108,0,131	0/0:29,0:29:85.83:0,86,1250	0/0:15,0:15:43.69:0,44,603	0/0:21,0:21:55.72:0,56,805	0/0:12,0:12:33.11:0,33,479	0/0:12,0:12:28.32:0,28,405	0/0:11,0:11:32.90:0,33,479	0/0:9,0:9:25.63:0,26,358	0/0:15,0:15:36.12:0,36,555	0/0:21,0:21:62.36:0,62,713	0/0:16,0:16:42.07:0,42,465	0/0:9,0:9:24.06:0,24,293
chr10	1862325	.	GTGT	G	434.84	PASS	AB=0.801;AC=3;AF=0.054;AN=56;BaseQRankSum=7.831;DP=485;FS=0.762;HRun=0;HaplotypeScore=82.4856;InbreedingCoeff=-0.0525;MQ=59.21;MQ0=9;MQRankSum=-3.092;QD=6.21;ReadPosRankSum=2.548;VQSLOD=2.3210;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:17,11:27:99:296,0,153	0/0:7,0:7:21.07:0,21,491	0/0:28,0:9:27.08:0,27,373	0/1:18,0:9:2.82:3,0,169	0/0:25,0:25:75.04:0,75,1468	0/0:29,0:29:73.84:0,74,1703	0/0:12,0:12:33.10:0,33,598	0/0:22,0:22:66.22:0,66,1322	0/0:9,0:9:12.04:0,12,200	0/0:22,0:22:66.01:0,66,1434	0/0:26,0:26:69.24:0,69,1570	0/0:4,0:4:12.04:0,12,259	0/0:12,0:12:35.91:0,36,765	0/0:13,0:13:35.76:0,36,667	0/0:16,0:16:42.14:0,42,995	0/0:14,0:14:41.93:0,42,837	0/1:13,11:24:99:227,0,181	0/0:29,0:29:87.08:0,87,1771	0/0:15,0:15:44.94:0,45,816	0/0:21,0:21:59.99:0,60,1223	0/0:12,0:12:33.11:0,33,644	0/0:13,0:13:29.43:0,29,571	0/0:12,0:12:36.11:0,36,750	0/0:10,0:10:26.88:0,27,517	0/0:17,0:17:31.72:0,32,831	0/0:21,0:21:63.21:0,63,1138	0/0:17,0:17:45.15:0,45,771	0/0:9,0:9:24.08:0,24,423
chr10	1862398	.	A	AT	1775.65	PASS	AC=6;AF=0.111;AN=54;BaseQRankSum=6.098;DP=381;FS=2.556;HRun=7;HaplotypeScore=43.6286;InbreedingCoeff=0.9296;MQ=69.24;MQ0=0;MQRankSum=-0.420;QD=30.10;ReadPosRankSum=2.078;VQSLOD=4.0540;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,25:28:72.22:868,72,0	0/0:7,0:7:12.01:0,12,116	0/0:8,0:8:8.12:0,8,99	./.	0/0:26,0:26:72.05:0,72,680	0/0:21,0:21:54.08:0,54,521	0/0:10,0:10:27.03:0,27,254	0/0:23,0:23:54.06:0,54,513	1/1:2,7:9:24.07:288,24,0	0/0:9,0:9:24.04:0,24,232	0/0:22,0:22:63.07:0,63,597	0/0:5,0:5:15.02:0,15,145	0/0:7,0:7:18.03:0,18,174	0/0:7,0:7:21.03:0,21,202	0/0:10,0:10:27.04:0,27,260	0/0:16,0:15:42.06:0,42,406	1/1:1,21:22:63.19:761,63,0	0/0:22,1:23:26.83:0,27,530	0/0:9,0:9:24.02:0,24,226	0/0:25,0:25:63.05:0,63,595	0/0:9,0:9:21.03:0,21,203	0/0:6,0:6:9.01:0,9,87	0/0:14,0:14:42.05:0,42,399	0/0:8,0:8:21.03:0,21,201	0/0:16,0:16:48.08:0,48,464	0/0:13,0:13:33.05:0,33,319	0/0:14,0:14:36.06:0,36,348	0/0:10,0:10:24.04:0,24,232
chr10	1865067	.	GT	G	270.81	PASS	AB=0.928;AC=5;AF=0.089;AN=56;BaseQRankSum=6.558;DP=585;FS=0.000;HRun=10;HaplotypeScore=69.3480;InbreedingCoeff=0.3557;MQ=67.49;MQ0=2;MQRankSum=-0.102;QD=3.47;ReadPosRankSum=-1.750;VQSLOD=-0.7177;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,108,1175	0/0:6,0:6:15.04:0,15,166	0/1:15,3:12:46.68:47,0,75	0/1:20,0:15:25.99:26,0,80	0/0:28,0:30:77.88:0,78,825	0/0:21,1:23:36.93:0,37,610	0/0:17,0:17:50.81:0,51,542	0/1:23,2:25:2.43:2,0,542	1/1:1,14:15:35.98:312,36,0	0/0:30,1:31:63.03:0,63,839	0/0:24,1:26:45.97:0,46,718	0/0:14,1:15:16.05:0,16,396	0/0:18,0:18:53.97:0,54,571	0/0:14,0:15:35.93:0,36,377	0/0:21,0:21:51.10:0,51,545	0/0:16,0:16:45.11:0,45,490	0/0:24,1:25:40.12:0,40,671	0/0:15,1:16:15.98:0,16,381	0/0:30,2:31:22.18:0,22,659	0/0:26,0:26:66.13:0,66,715	0/0:12,0:13:38.94:0,39,412	0/0:17,0:20:50.96:0,51,538	0/0:21,0:22:56.98:0,57,603	0/0:24,0:26:68.84:0,69,717	0/0:15,0:15:39.58:0,40,433	0/0:18,2:21:7.99:0,8,524	0/0:20,0:21:57.15:0,57,626	0/0:11,0:11:33.09:0,33,365
chr10	1865349	.	TTTG	T	1514.62	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.246;DP=713;FS=4.051;HRun=0;HaplotypeScore=96.2332;InbreedingCoeff=0.9998;MQ=71.60;MQ0=0;MQRankSum=-3.442;QD=27.05;ReadPosRankSum=1.837;VQSLOD=3.7387;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,25:32:57.15:828,57,0	0/0:15,0:15:39.12:0,39,780	0/0:32,0:31:75.18:0,75,1319	0/0:18,0:17:36.08:0,36,650	0/0:28,0:28:78.27:0,78,1617	0/0:33,0:33:90.18:0,90,1648	0/0:18,0:18:45.15:0,45,928	0/0:37,0:37:81.25:0,81,1591	0/0:21,0:21:57.18:0,57,1151	0/0:31,0:31:78.26:0,78,1603	0/0:23,0:23:66.20:0,66,1297	0/0:15,0:15:36.11:0,36,716	0/0:28,0:28:66.21:0,66,1346	0/0:20,0:20:57.18:0,57,1156	0/0:37,0:36:99:0,102,2100	0/0:26,0:26:66.18:0,66,1248	1/1:2,22:24:54.18:808,54,0	0/0:24,0:24:72.21:0,72,1402	0/0:23,0:23:45.14:0,45,861	0/0:29,0:29:78.25:0,78,1565	0/0:29,0:29:81.23:0,81,1569	0/0:20,0:20:57.20:0,57,1196	0/0:21,0:21:57.20:0,57,1148	0/0:26,0:26:57.16:0,57,1118	0/0:27,0:27:78.27:0,78,1601	0/0:23,0:23:57.18:0,57,1141	0/0:36,0:36:93.24:0,93,1746	0/0:17,0:17:51.15:0,51,1014
chr10	1865658	.	A	ACACCAAAGAG	3089.03	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=7.139;DP=619;FS=49.508;HRun=0;HaplotypeScore=181.4781;InbreedingCoeff=0.9778;MQ=75.43;MQ0=0;MQRankSum=-7.510;QD=81.29;ReadPosRankSum=1.687;VQSLOD=1.7531;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,9:13:24.08:1165,24,0	0/0:10,0:10:30.10:0,30,990	0/0:29,0:28:81.25:0,81,2190	0/0:19,0:19:52.39:0,52,1512	0/0:33,0:33:89.89:0,90,2993	0/0:14,0:14:42.14:0,42,1382	0/0:20,0:20:57.16:0,57,1768	0/0:27,0:27:81.27:0,81,2643	1/1:0,10:15:30.10:1573,30,0	0/0:29,0:29:87.28:0,87,2867	0/0:28,0:28:72.25:0,72,2386	0/0:19,0:19:57.18:0,57,1748	0/0:17,0:17:51.14:0,51,1530	0/0:16,0:16:48.15:0,48,1513	0/0:32,0:32:90.30:0,90,2983	0/0:19,0:19:54.17:0,54,1776	1/1:0,5:7:9.03:488,9,0	0/0:26,0:26:75.23:0,75,2340	0/0:25,0:24:72.25:0,72,2328	0/0:22,0:22:63.22:0,63,2030	0/0:27,0:27:75.26:0,75,2505	0/0:27,0:27:69.24:0,69,2320	0/0:21,0:21:51.18:0,51,1667	0/0:35,0:35:99:0,102,2739	0/0:23,0:23:60.21:0,60,1987	0/0:21,0:21:60.21:0,60,1857	0/0:28,0:28:81.26:0,81,2343	0/0:14,0:14:42.14:0,42,1395
chr10	1865871	.	T	TA	1272.30	PASS	AB=0.842;AC=9;AF=0.161;AN=56;BaseQRankSum=7.813;DP=576;FS=4.113;HRun=2;HaplotypeScore=59.9294;InbreedingCoeff=0.3844;MQ=59.08;MQ0=41;MQRankSum=-2.648;QD=8.84;ReadPosRankSum=-0.912;VQSLOD=0.8685;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:7:11.97:0,12,129	0/0:6,0:6:15.05:0,15,186	0/1:41,0:10:0.05:0,0,155	0/0:39,0:10:12.51:0,13,143	0/0:15,0:15:45.13:0,45,546	0/0:13,0:13:36.05:0,36,426	0/0:25,0:24:59.64:0,60,707	0/1:16,4:8:99:148,0,125	0/1:32,7:21:99:158,0,462	0/0:27,0:26:75.23:0,75,918	0/0:14,0:14:26.68:0,27,317	0/0:15,0:15:42.13:0,42,515	0/0:21,0:21:63.19:0,63,769	0/0:17,0:17:44.77:0,45,557	0/0:29,0:28:75.23:0,75,918	0/0:26,0:26:78.25:0,78,967	0/1:7,0:5:31.02:31,0,31	0/0:20,0:20:54.17:0,54,663	0/0:18,0:15:42.13:0,42,521	0/0:21,0:21:54.17:0,54,669	0/0:32,0:30:78.25:0,78,966	0/0:14,0:14:23.71:0,24,297	0/0:14,0:14:30.08:0,30,358	0/0:31,0:31:84.21:0,84,1012	0/0:22,0:22:54.12:0,54,650	0/1:2,17:19:7.80:562,0,8	1/1:2,9:11:21.07:302,21,0	1/1:1,6:7:15.01:216,15,0
chr10	1866800	.	A	AG	69.34	PASS	AB=0.800;AC=4;AF=0.074;AN=54;BaseQRankSum=3.324;DP=839;FS=0.000;HRun=2;HaplotypeScore=59.7478;InbreedingCoeff=0.5054;MQ=46.89;MQ0=131;MQRankSum=-3.198;QD=4.33;ReadPosRankSum=-1.546;VQSLOD=-0.1627;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	0/0:7,0:7:18.05:0,18,212	0/0:43,1:1:2.90:0,3,16	0/0:50,0:5:15.04:0,15,168	0/0:36,0:30:57.17:0,57,693	0/0:31,0:30:63.16:0,63,764	0/0:39,0:35:51.38:0,51,936	0/0:46,0:19:45.12:0,45,533	0/0:17,0:11:21.07:0,21,259	0/0:63,0:49:99:0,129,1596	0/0:23,0:21:36.11:0,36,446	0/0:40,0:39:84.26:0,84,1040	0/0:32,0:31:84.26:0,84,1041	0/0:35,0:35:96.29:0,96,1179	0/0:35,0:34:93.25:0,93,1104	0/0:35,0:35:93.25:0,93,1124	0/1:2,0:2:0:0,0,0	0/0:27,0:26:72.18:0,72,875	0/0:16,0:10:24.07:0,24,288	0/0:27,0:21:33.47:0,33,388	0/0:64,0:59:99:0,150,1854	0/0:38,0:37:68.90:0,69,802	0/0:27,0:25:42.07:0,42,490	0/0:37,0:37:99:0,102,1241	0/0:38,0:32:52.18:0,52,694	0/0:7,0:2:6.02:0,6,74	1/1:3,8:8:8.70:128,9,0	0/1:1,2:3:31.04:37,0,31
chr10	1867676	.	CTGTGTGTGTGTGTG	C	979.62	PASS	AC=6;AF=0.111;AN=54;BaseQRankSum=5.228;DP=643;FS=10.554;HRun=0;HaplotypeScore=218.9883;InbreedingCoeff=0.8580;MQ=61.19;MQ0=15;MQRankSum=-2.624;QD=15.31;ReadPosRankSum=0.751;VQSLOD=1.6528;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:26:36.12:0,36,1036	0/0:8,0:8:12.03:0,12,558	./.	0/0:32,0:19:6.02:0,6,86	0/0:16,0:24:22.01:0,22,1043	0/0:27,0:27:12.04:0,12,653	0/0:21,0:21:27.09:0,27,1407	0/0:20,0:20:12.04:0,12,141	0/0:14,0:19:21.07:0,21,738	0/0:26,0:25:36.12:0,36,1754	0/0:16,0:16:22.01:0,22,844	0/0:16,0:17:21.07:0,21,1087	0/0:8,0:9:12.04:0,12,503	0/0:18,0:18:42.14:0,42,2013	0/0:18,0:19:27.08:0,27,1250	0/0:15,0:15:26.58:0,27,1185	0/0:33,0:33:12.98:0,13,519	0/0:20,0:22:30.10:0,30,1329	0/0:26,0:25:33.25:0,33,1151	0/0:19,0:18:24.54:0,25,1036	0/0:49,0:49:78.74:0,79,3374	0/0:21,0:21:18.06:0,18,866	0/0:18,0:19:36.12:0,36,1626	0/0:32,0:31:66.23:0,66,3346	0/0:27,0:26:24.55:0,25,1320	1/1:19,6:26:17.61:340,18,0	1/1:12,8:22:15.05:534,15,0	1/1:8,8:16:6.02:235,6,0
chr10	1869096	.	C	CTCCGAA	2429.50	PASS	AB=0.977;AC=7;AF=0.125;AN=56;BaseQRankSum=7.531;DP=539;FS=10.567;HRun=0;HaplotypeScore=131.5920;InbreedingCoeff=0.8428;MQ=58.78;MQ0=13;MQRankSum=-7.709;QD=26.70;ReadPosRankSum=-0.043;VQSLOD=2.7590;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,11:19:53.90:1225,54,0	0/0:11,0:11:30.09:0,30,692	0/0:33,0:14:31.01:0,31,541	0/1:41,0:11:6.60:7,0,437	0/0:27,0:27:78.25:0,78,1841	0/0:22,0:22:66.17:0,66,1504	0/0:18,0:18:42.10:0,42,1003	0/0:19,0:19:32.55:0,33,419	1/1:7,0:16:42.03:749,42,0	0/0:28,0:27:78.26:0,78,1810	0/0:13,0:13:33.10:0,33,794	0/0:22,0:22:57.19:0,57,1432	0/0:14,0:14:39.13:0,39,925	0/0:27,0:27:78.23:0,78,1816	0/0:12,0:12:33.11:0,33,755	0/0:23,0:23:66.23:0,66,1612	1/1:7,6:12:25:594,25,0	0/0:12,0:12:33.11:0,33,810	0/0:12,0:10:27.09:0,27,692	0/0:18,0:18:48.15:0,48,1149	0/0:14,0:14:30.10:0,30,766	0/0:16,0:16:45.14:0,45,1080	0/0:17,0:17:45.15:0,45,1041	0/0:20,0:20:57.20:0,57,1444	0/0:27,0:27:69.17:0,69,1593	0/0:18,0:18:11.71:0,12,769	0/0:17,0:17:30.96:0,31,716	0/0:8,0:8:11.78:0,12,161
chr10	1869100	.	G	GAAAAA	6620.86	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=8.407;DP=565;FS=8.359;HRun=7;HaplotypeScore=125.9518;InbreedingCoeff=0.9087;MQ=58.92;MQ0=11;MQRankSum=-12.444;QD=35.41;ReadPosRankSum=-4.775;VQSLOD=0.6864;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:22:53.72:1006,54,0	0/0:11,0:11:24.06:0,24,422	0/0:30,0:15:26.12:0,26,407	0/1:40,0:11:17.47:17,0,339	0/0:24,0:24:57.10:0,57,893	0/0:22,0:22:63.16:0,63,1030	0/0:16,0:16:39.13:0,39,687	1/1:6,13:25:57.15:1342,57,0	1/1:16,0:16:39.09:956,39,0	0/0:28,0:27:69.16:0,69,1144	0/0:12,0:12:36.12:0,36,628	0/0:21,0:21:54.12:0,54,868	0/0:16,0:16:36.07:0,36,578	0/0:25,0:25:54.06:0,54,862	0/0:12,0:12:27.07:0,27,453	0/0:23,0:23:60.13:0,60,950	1/1:19,0:17:41.42:803,41,0	0/0:15,0:15:27.04:0,27,459	0/0:11,0:10:30.08:0,30,452	0/0:18,0:18:48.13:0,48,807	0/0:14,0:14:30.08:0,30,491	0/0:15,0:15:45.11:0,45,695	0/0:17,0:17:39.01:0,39,540	0/0:23,0:23:60.13:0,60,962	0/0:24,0:24:48.13:0,48,832	1/1:28,0:31:66.67:1360,67,0	1/1:19,0:22:44.39:767,44,0	1/1:8,0:11:21.53:369,22,0
chr10	1869275	.	G	GA	951.71	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-3.202;DP=479;FS=1.474;HRun=8;HaplotypeScore=52.7547;InbreedingCoeff=0.9649;MQ=78.43;MQ0=0;MQRankSum=-2.088;QD=23.79;ReadPosRankSum=1.534;VQSLOD=4.3595;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,24:28:66.20:761,66,0	0/0:5,0:5:12:0,12,110	0/0:12,0:12:23.97:0,24,216	0/0:11,0:11:20.89:0,21,162	0/0:34,0:34:81.01:0,81,736	0/0:27,0:27:78.04:0,78,714	0/0:15,0:15:42.02:0,42,384	0/0:5,0:30:50.92:0,51,149	0/0:19,0:19:54.03:0,54,494	0/0:20,0:20:57.03:0,57,522	0/0:25,0:25:69.04:0,69,631	0/0:18,0:18:45.02:0,45,412	0/0:14,0:14:33.01:0,33,302	0/0:11,0:12:23.04:0,23,198	0/0:9,0:9:20.99:0,21,187	0/0:16,0:16:36.01:0,36,329	1/1:2,10:12:27.08:312,27,0	0/0:8,0:8:18:0,18,165	0/0:21,0:21:57.01:0,57,517	0/0:22,0:22:57.03:0,57,522	0/0:16,0:16:45.02:0,45,412	0/0:19,0:19:51.03:0,51,467	0/0:15,0:15:45.02:0,45,412	0/0:14,0:14:36.01:0,36,330	0/0:22,0:22:63.03:0,63,577	0/0:14,0:14:36.02:0,36,329	0/0:16,0:16:32.99:0,33,297	0/0:5,0:5:15.01:0,15,137
chr10	1870015	.	T	TCC	1278.52	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=4.349;DP=546;FS=9.332;HRun=2;HaplotypeScore=85.8693;InbreedingCoeff=0.9348;MQ=66.40;MQ0=23;MQRankSum=-3.658;QD=33.65;ReadPosRankSum=-0.042;VQSLOD=2.8338;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:19,7:24:59.46:1033,59,0	0/0:7,0:7:21.06:0,21,290	0/0:42,0:21:55.63:0,56,713	0/0:70,0:23:53.90:0,54,626	0/0:15,0:14:33.10:0,33,465	0/0:17,0:17:44.97:0,45,612	0/0:20,0:15:41.45:0,41,538	0/0:24,0:20:48.48:0,48,550	0/0:19,0:19:33.08:0,33,462	0/0:25,0:24:66.21:0,66,938	0/0:11,0:11:30.10:0,30,441	0/0:7,0:7:20.28:0,20,271	0/0:9,0:9:27.09:0,27,394	0/0:10,0:10:30.10:0,30,427	0/0:11,0:11:30.07:0,30,403	0/0:10,0:9:21.06:0,21,275	1/1:11,1:10:6.07:357,6,0	0/0:15,0:14:41.88:0,42,586	0/0:22,0:21:60.15:0,60,821	0/0:12,0:12:30.10:0,30,440	0/0:32,0:28:72.55:0,73,971	0/0:23,0:22:60.20:0,60,879	0/0:16,0:16:42.11:0,42,577	0/0:27,0:26:63.21:0,63,917	0/0:18,0:18:45.04:0,45,662	0/0:26,0:23:69.21:0,69,967	0/0:11,0:11:30.06:0,30,398	0/0:9,0:9:27.05:0,27,355
chr10	1870017	.	CTCT	C	1036.93	PASS	AB=0.632;AC=3;AF=0.054;AN=56;BaseQRankSum=6.026;DP=552;FS=4.334;HRun=0;HaplotypeScore=90.2584;InbreedingCoeff=0.6211;MQ=64.42;MQ0=26;MQRankSum=-2.202;QD=26.59;ReadPosRankSum=0.045;VQSLOD=3.6320;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:15,11:24:60.15:854,60,0	0/0:7,0:7:21.06:0,21,438	0/0:42,0:21:55.11:0,55,1100	0/0:68,0:21:32.57:0,33,717	0/0:15,0:14:33.09:0,33,694	0/0:16,0:16:45.14:0,45,1014	0/0:22,0:16:40.84:0,41,756	0/0:24,0:19:10.67:0,11,205	0/0:18,0:17:33:0,33,520	0/0:26,0:25:72.20:0,72,1458	0/0:11,0:11:30.10:0,30,707	0/0:7,0:7:19.31:0,19,425	0/0:9,0:9:27.09:0,27,559	0/0:10,0:10:30.10:0,30,688	0/0:11,0:11:30.08:0,30,634	0/0:9,0:8:21.06:0,21,390	0/1:5,7:10:29.73:289,0,30	0/0:15,0:14:42.09:0,42,977	0/0:24,0:22:66.06:0,66,1297	0/0:11,0:11:30.10:0,30,643	0/0:34,0:30:68.14:0,68,1541	0/0:23,0:22:60.21:0,60,1431	0/0:16,0:16:45.07:0,45,876	0/0:28,0:27:66.15:0,66,1520	0/0:18,0:18:45.15:0,45,1070	0/0:28,0:25:75.20:0,75,1598	0/0:12,0:12:30.06:0,30,634	0/0:9,0:9:27.05:0,27,561
chr10	1870026	.	CCT	C	824.96	PASS	AB=0.869;AC=7;AF=0.125;AN=56;BaseQRankSum=7.032;DP=555;FS=5.222;HRun=0;HaplotypeScore=82.3786;InbreedingCoeff=0.4780;MQ=60.48;MQ0=41;MQRankSum=-3.311;QD=5.50;ReadPosRankSum=-0.720;VQSLOD=2.3582;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:19,10:26:34.18:432,34,0	0/0:7,0:7:14.79:0,15,205	0/0:41,0:21:38.15:0,38,533	0/1:62,3:18:49:49,0,254	0/0:15,0:13:15.04:0,15,205	0/0:16,0:16:36.12:0,36,572	0/0:19,0:12:27.34:0,27,375	0/1:27,0:19:51.03:51,0,174	1/1:5,11:15:18.06:247,18,0	0/0:27,0:24:52.35:0,52,799	0/0:10,0:10:21.07:0,21,334	0/0:8,0:8:21:0,21,295	0/0:6,0:6:18.06:0,18,290	0/0:14,0:13:25.11:0,25,355	0/0:11,0:10:21.07:0,21,337	0/0:6,1:6:9.03:0,9,135	0/1:6,7:11:35.92:188,0,36	0/0:16,0:15:26.92:0,27,575	0/0:22,0:19:41.78:0,42,589	0/0:9,0:9:15.05:0,15,238	0/0:35,0:29:58.14:0,58,918	0/0:23,0:22:45.14:0,45,671	0/0:14,0:12:27.05:0,27,351	0/0:30,0:29:65.73:0,66,957	0/0:17,0:17:30.06:0,30,387	0/0:33,0:26:65.49:0,65,1024	0/0:10,0:10:23.44:0,23,345	0/0:14,0:11:15.05:0,15,243
chr10	1870070	.	TCTC	T	32.13	PASS	AB=0.943;AC=7;AF=0.130;AN=54;BaseQRankSum=4.085;DP=342;FS=17.976;HRun=0;HaplotypeScore=35.6005;InbreedingCoeff=0.0513;MQ=28.61;MQ0=122;MQRankSum=-3.195;QD=0.56;ReadPosRankSum=1.226;VQSLOD=0.0569;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:18,1:10:12.72:13,0,188	0/0:2,0:2:4.83:0,5,46	0/0:37,0:2:2.82:0,3,15	0/0:66,0:3:2.91:0,3,41	0/0:3,0:2:6:0,6,65	0/0:10,0:8:21.07:0,21,269	0/0:13,0:6:3.38:0,3,8	0/0:22,0:16:42.13:0,42,617	0/1:12,0:7:11.79:12,0,40	0/0:9,0:9:24.08:0,24,382	0/0:2,0:2:3.01:0,3,39	0/0:3,0:2:0.47:0,0,1	1/1:1,1:1:3.01:48,3,0	0/0:5,0:2:6.02:0,6,107	./.	0/0:4,0:3:3.01:0,3,64	0/1:5,1:4:8.30:28,0,8	0/0:5,0:5:1.25:0,1,3	0/0:16,0:7:18.06:0,18,267	0/0:8,0:6:13.84:0,14,153	0/0:28,0:21:30.26:0,30,452	0/0:8,0:6:12.04:0,12,217	0/0:9,0:5:11.95:0,12,165	0/1:9,1:9:40.88:41,0,69	0/0:5,0:4:3:0,3,41	0/0:16,0:4:12.04:0,12,154	0/1:8,0:8:1.12:1,0,62	0/0:9,0:2:3.01:0,3,62
chr10	1870493	.	GA	G	1643.43	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.780;DP=695;FS=12.170;HRun=2;HaplotypeScore=66.1693;InbreedingCoeff=0.9987;MQ=87.76;MQ0=0;MQRankSum=-0.379;QD=35.73;ReadPosRankSum=-4.131;VQSLOD=1.3666;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,138,2068	0/0:10,0:10:30.09:0,30,432	0/0:24,0:25:68.68:0,69,932	0/0:26,0:26:69.15:0,69,983	0/0:29,0:29:87.29:0,87,1304	0/0:27,0:27:81.26:0,81,1193	0/0:23,0:23:69.19:0,69,1006	1/1:0,46:46:99:1738,135,0	0/0:21,0:21:63.21:0,63,943	0/0:18,0:18:54.18:0,54,810	0/0:22,0:22:66.22:0,66,989	0/0:21,0:21:63.21:0,63,940	0/0:37,0:37:99:0,111,1642	0/0:16,0:16:48.15:0,48,698	0/0:29,0:28:87.29:0,87,1304	0/0:25,0:25:75.25:0,75,1122	0/0:41,0:41:99:0,120,1756	0/0:10,0:10:30.10:0,30,450	0/0:16,0:16:45.14:0,45,657	0/0:20,0:20:60.20:0,60,899	0/0:35,0:35:99:0,102,1508	0/0:21,0:21:57.19:0,57,854	0/0:25,0:25:75.25:0,75,1124	0/0:32,0:32:93.30:0,93,1375	0/0:15,0:15:42.14:0,42,630	0/0:17,0:17:51.17:0,51,765	0/0:31,0:31:90.27:0,90,1289	0/0:11,0:11:33.09:0,33,474
chr10	1871030	.	TAC	T	3871.03	PASS	AB=0.905;AC=13;AF=0.232;AN=56;BaseQRankSum=10.216;DP=701;FS=1.750;HRun=0;HaplotypeScore=87.5549;InbreedingCoeff=0.8817;MQ=73.12;MQ0=1;MQRankSum=-0.403;QD=22.77;ReadPosRankSum=-0.722;VQSLOD=4.0343;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,25:32:57.14:713,57,0	0/0:15,0:15:42.14:0,42,676	0/0:39,1:35:16.47:0,16,661	0/0:40,0:37:72.18:0,72,1067	0/0:22,0:22:57.19:0,57,934	0/0:20,0:20:50.38:0,50,792	0/0:25,0:25:54.18:0,54,879	1/1:6,35:41:58.32:1200,58,0	0/0:5,0:28:57.02:0,57,505	0/0:30,0:30:78.25:0,78,1219	0/0:15,0:15:33.04:0,33,510	0/0:19,0:19:45.15:0,45,736	0/0:21,0:21:60.16:0,60,936	0/0:24,0:24:63.15:0,63,961	0/0:28,0:28:72.25:0,72,1178	0/0:18,0:18:45.12:0,45,704	1/1:2,19:21:45.14:563,45,0	0/0:18,0:18:39.13:0,39,619	0/0:21,0:21:51.63:0,52,819	0/0:27,0:27:69.22:0,69,1107	0/0:51,0:52:99:0,107,2169	0/0:25,0:25:66.23:0,66,1075	0/0:18,0:18:48.15:0,48,766	0/1:17,2:19:23.88:24,0,659	0/0:24,1:25:31.72:0,32,1048	1/1:6,19:25:13.64:697,14,0	1/1:8,20:27:45.08:563,45,0	1/1:0,4:4:9.03:113,9,0
chr10	1871141	.	C	CCTCCCTGGTG	5896.66	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=1.840;DP=725;FS=4.581;HRun=0;HaplotypeScore=212.0621;InbreedingCoeff=0.9823;MQ=71.96;MQ0=1;MQRankSum=-10.225;QD=90.72;ReadPosRankSum=-2.043;VQSLOD=3.9521;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:25,17:42:87.27:3906,87,0	0/0:6,0:6:12.04:0,12,340	0/0:26,0:23:66.23:0,66,1876	0/0:29,0:28:70.94:0,71,1954	0/0:38,0:38:99:0,108,3370	0/0:15,0:15:42.14:0,42,1395	0/0:22,0:22:63.21:0,63,1910	0/0:34,0:34:93.29:0,93,2846	0/0:29,0:29:81.23:0,81,2612	0/0:30,0:30:84.26:0,84,2655	0/0:15,0:15:45.15:0,45,1496	0/0:21,0:21:60.21:0,60,1839	0/0:35,0:35:96.33:0,96,3000	0/0:29,0:29:87.26:0,87,2820	0/0:27,0:27:78.26:0,78,2491	0/0:24,0:24:72.25:0,72,2388	1/1:10,9:23:45.15:1990,45,0	0/0:13,0:13:39.12:0,39,1174	0/0:36,0:36:93.32:0,93,2945	0/0:17,0:17:51.18:0,51,1701	0/0:41,0:41:99:0,114,3646	0/0:23,0:23:66.20:0,66,2028	0/0:27,0:27:75.26:0,75,2395	0/0:30,0:30:90.31:0,90,2905	0/0:20,0:20:57.17:0,57,1819	0/0:39,0:39:99:0,117,3551	0/0:27,0:27:78.25:0,78,2487	0/0:7,0:7:21.07:0,21,633
chr10	1872530	.	TTG	T	188.44	PASS	AB=0.921;AC=14;AF=0.259;AN=54;BaseQRankSum=4.119;DP=587;FS=11.899;HRun=0;HaplotypeScore=83.9846;InbreedingCoeff=-0.0115;MQ=72.34;MQ0=10;MQRankSum=1.506;QD=0.72;ReadPosRankSum=0.309;VQSLOD=0.4528;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:30:8.52:42,9,0	0/0:13,0:12:9.03:0,9,134	./.	0/0:38,0:24:3.01:0,3,40	0/1:16,4:20:31.17:31,0,234	0/0:8,0:8:9.02:0,9,116	0/1:27,2:29:44.08:44,0,183	0/0:30,0:30:31.01:0,31,248	0/0:16,0:17:8.99:0,9,75	0/1:14,0:14:16.81:17,0,81	0/1:9,1:10:51.93:52,0,77	1/1:14,0:18:5.68:28,6,0	0/0:10,0:10:6.02:0,6,89	0/1:21,3:24:44.43:44,0,152	0/1:20,3:23:8.65:9,0,268	0/0:22,0:21:24.05:0,24,318	0/0:32,0:31:53.82:0,54,727	0/0:20,0:20:12.04:0,12,179	0/0:19,0:18:1.15:0,1,48	0/1:18,2:19:11.65:12,0,243	0/1:35,0:38:33.99:34,0,193	0/0:17,0:17:13.24:0,13,222	0/0:12,0:12:14.26:0,14,186	0/1:23,5:28:23.64:24,0,414	0/0:20,0:20:24.07:0,24,336	0/0:17,0:18:41.88:0,42,398	0/0:15,0:15:17.72:0,18,175	0/1:6,0:6:0:1,0,0
chr10	1872703	.	A	AAAG	9690.67	PASS	AB=0.960;AC=15;AF=0.268;AN=56;BaseQRankSum=-0.276;DP=626;FS=7.656;HRun=0;HaplotypeScore=85.9527;InbreedingCoeff=0.9437;MQ=84.13;MQ0=0;MQRankSum=-8.499;QD=51.27;ReadPosRankSum=1.203;VQSLOD=7.1806;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,29:31:65.03:1552,65,0	0/0:12,0:12:36.12:0,36,646	0/0:18,0:18:50.51:0,51,814	0/0:24,0:24:69.08:0,69,1035	0/0:26,0:26:75.26:0,75,1339	0/0:17,0:17:51.14:0,51,830	0/0:24,0:24:72.25:0,72,1293	1/1:0,30:33:99:2176,99,0	1/1:1,24:25:57.20:1401,57,0	0/0:14,0:14:42.13:0,42,701	0/0:16,0:16:48.16:0,48,862	0/0:24,0:24:69.22:0,69,1178	0/0:12,0:12:33.09:0,33,529	0/0:16,0:16:48.15:0,48,832	0/0:23,0:23:65.91:0,66,1185	0/1:23,1:24:1.70:2,0,1101	1/1:0,29:29:75.17:1788,75,0	0/0:24,0:24:69.24:0,69,1228	0/0:17,0:17:51.16:0,51,870	0/0:24,0:24:72.19:0,72,1189	0/0:37,0:37:99:0,111,1899	0/0:28,0:28:81.25:0,81,1395	0/0:18,0:18:51.10:0,51,795	0/0:37,0:37:99:0,108,1938	0/0:26,0:26:78.24:0,78,1343	1/1:0,22:24:72.20:1593,72,0	1/1:0,9:9:21.07:514,21,0	1/1:1,11:12:27.09:663,27,0
chr10	1873675	.	CCTT	C	1042.17	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.971;DP=538;FS=17.943;HRun=0;HaplotypeScore=76.4919;InbreedingCoeff=0.9759;MQ=90.14;MQ0=0;MQRankSum=-1.449;QD=33.62;ReadPosRankSum=-3.930;VQSLOD=1.7550;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:57:99:0,169,3775	0/0:6,0:6:18.06:0,18,415	0/0:22,0:22:63.22:0,63,1341	0/0:19,0:19:57.19:0,57,1237	0/0:20,0:20:60.21:0,60,1364	0/0:20,0:20:60.21:0,60,1366	0/0:18,0:18:51.16:0,51,1132	1/1:4,27:31:78.15:1137,78,0	0/0:6,0:6:18.06:0,18,415	0/0:28,0:28:84.29:0,84,1921	0/0:13,0:13:39.13:0,39,898	0/0:15,0:15:45.15:0,45,1038	0/0:14,0:14:42.14:0,42,969	0/0:18,0:18:48.14:0,48,1019	0/0:22,0:22:66.21:0,66,1430	0/0:17,0:17:51.16:0,51,1132	0/0:22,0:22:66.23:0,66,1482	0/0:11,0:11:33.11:0,33,761	0/0:12,0:12:36.12:0,36,831	0/0:19,0:19:57.15:0,57,1223	0/0:46,0:46:99:0,132,2936	0/0:24,0:24:72.25:0,72,1651	0/0:16,0:16:48.16:0,48,1089	0/0:14,0:14:42.13:0,42,925	0/0:12,0:12:36.12:0,36,812	0/0:15,0:15:45.15:0,45,1033	0/0:15,0:15:45.15:0,45,1028	0/0:6,0:6:18.06:0,18,397
chr10	1874127	.	A	AT	1652.12	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-10.096;DP=656;FS=0.000;HRun=6;HaplotypeScore=61.4847;InbreedingCoeff=0.9956;MQ=80.72;MQ0=0;MQRankSum=-4.587;QD=30.59;ReadPosRankSum=2.773;VQSLOD=4.2523;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,33:34:93.30:1170,93,0	0/0:18,0:18:51.12:0,51,520	0/0:19,0:19:45.08:0,45,448	0/0:16,0:16:39.05:0,39,383	0/0:38,0:38:99:0,105,1064	0/0:18,0:18:51.11:0,51,520	0/0:15,0:15:33.07:0,33,336	0/0:28,0:28:78.17:0,78,796	0/0:14,0:14:39.09:0,39,398	0/0:29,0:29:81.18:0,81,823	0/0:23,0:23:60.12:0,60,606	0/0:29,0:29:78.16:0,78,789	0/0:25,0:25:66.11:0,66,663	0/0:23,0:23:63.14:0,63,642	0/0:18,0:18:42.06:0,42,418	0/0:17,0:17:45.08:0,45,451	1/1:3,17:20:48.15:604,48,0	0/0:20,0:20:54.04:0,54,525	0/0:42,0:42:99:0,111,1125	0/0:33,0:33:93.21:0,93,949	0/0:36,0:36:99:0,105,1071	0/0:30,0:30:81.11:0,81,812	0/0:23,0:23:63.14:0,63,643	0/0:18,0:18:51.12:0,51,520	0/0:28,0:28:84.19:0,84,857	0/0:21,0:21:57.13:0,57,581	0/0:15,0:14:42.10:0,42,428	0/0:6,0:6:18.04:0,18,184
chr10	1874170	.	T	TC	622.19	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-7.427;DP=700;FS=15.019;HRun=6;HaplotypeScore=70.4587;InbreedingCoeff=0.9843;MQ=94.99;MQ0=0;MQRankSum=-3.381;QD=23.93;ReadPosRankSum=-2.379;VQSLOD=1.6336;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:96.21:0,96,979	0/0:16,0:16:36.08:0,36,367	0/0:24,0:24:48.09:0,48,486	0/0:40,0:40:81.04:0,81,791	0/0:43,0:43:99:0,117,1192	0/0:24,0:24:63.14:0,63,643	0/0:20,0:20:57.13:0,57,582	1/1:6,20:26:57.18:717,57,0	0/0:23,0:23:66.15:0,66,673	0/0:26,0:25:72.15:0,72,731	0/0:23,0:23:66.13:0,66,666	0/0:23,0:23:54.12:0,54,551	0/0:28,0:28:72.14:0,72,728	0/0:23,0:23:60.05:0,60,580	0/0:18,0:18:51.11:0,51,520	0/0:20,0:20:60.14:0,60,612	0/0:17,0:17:51.12:0,51,520	0/0:20,0:20:60.14:0,60,612	0/0:37,0:37:90.12:0,90,896	0/0:30,0:30:90.20:0,90,917	0/0:34,0:34:93.20:0,93,949	0/0:29,0:29:72.16:0,72,733	0/0:20,0:20:57.12:0,57,581	0/0:21,0:21:60.14:0,60,612	0/0:28,0:28:78.17:0,78,796	0/0:23,0:23:60.13:0,60,612	0/0:22,0:22:63.14:0,63,643	0/0:5,0:5:15.03:0,15,153
chr10	1877171	.	TA	T	1036.84	PASS	AB=0.890;AC=8;AF=0.143;AN=56;BaseQRankSum=5.071;DP=503;FS=5.463;HRun=12;HaplotypeScore=56.7520;InbreedingCoeff=0.7190;MQ=70.39;MQ0=0;MQRankSum=0.195;QD=10.80;ReadPosRankSum=2.984;VQSLOD=3.0800;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,27:33:73.75:563,74,0	0/0:3,0:3:9.02:0,9,91	0/1:10,1:8:2.39:19,0,2	0/0:15,0:11:8.63:0,9,68	0/0:13,0:13:33.07:0,33,335	0/0:21,1:22:39.88:0,40,580	0/0:11,1:12:12.80:0,13,302	0/0:20,0:20:33.05:0,33,325	1/1:2,11:14:25.94:192,26,0	0/1:16,3:19:21.61:22,0,348	0/0:18,2:20:7.64:0,8,441	0/0:11,0:12:35.89:0,36,342	0/0:15,0:15:36.07:0,36,365	0/0:16,1:17:18.80:0,19,357	0/0:15,0:15:42.08:0,42,426	0/0:13,1:14:18.85:0,19,373	1/1:1,18:19:50.81:395,51,0	0/0:18,0:19:47.83:0,48,456	0/0:19,0:20:44.91:0,45,430	0/0:21,1:22:27.86:0,28,459	0/0:14,0:14:35.89:0,36,338	0/0:18,1:20:27.69:0,28,433	0/0:14,0:15:35.90:0,36,343	0/0:18,1:20:36.63:0,37,507	0/0:31,2:32:37.69:0,38,733	0/0:5,0:26:65.94:0,66,376	0/0:4,0:26:51.13:0,51,257	0/0:1,0:14:39.92:0,40,209
chr10	1877521	.	CCA	C	250.98	PASS	AB=0.916;AC=13;AF=0.232;AN=56;BaseQRankSum=6.533;DP=687;FS=10.601;HRun=0;HaplotypeScore=98.2583;InbreedingCoeff=0.2100;MQ=66.76;MQ0=15;MQRankSum=-3.478;QD=0.93;ReadPosRankSum=0.283;VQSLOD=0.6262;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:41,0:46:34.74:147,35,0	0/1:5,0:6:30.23:30,0,166	1/1:34,0:19:3:26,3,0	0/0:37,0:24:11.30:0,11,109	0/0:19,0:19:14.44:0,14,582	0/0:15,1:15:1.38:0,1,421	0/0:20,0:20:5.35:0,5,420	0/0:31,0:32:24.30:0,24,203	0/0:12,0:17:7.98:0,8,112	0/0:34,4:37:9.81:0,10,965	0/0:21,0:20:33.08:0,33,462	0/1:15,0:16:26.92:27,0,494	0/0:19,0:19:45.12:0,45,653	0/0:23,1:23:16.36:0,16,600	0/1:14,3:17:33.21:33,0,425	0/0:23,0:23:16.64:0,17,696	1/1:18,0:17:16.86:72,17,0	0/0:15,0:17:22.50:0,23,396	0/0:19,0:19:15.18:0,15,431	0/0:21,0:21:36.10:0,36,516	0/1:50,3:50:4.52:5,0,1210	0/1:40,2:41:25.71:26,0,851	0/1:15,2:17:38.23:38,0,396	0/0:29,0:30:51.16:0,51,750	0/1:18,2:20:4.57:5,0,379	0/0:16,0:26:41.06:0,41,269	0/0:8,0:23:9.33:0,9,58	0/0:8,0:12:18.74:0,19,122
chr10	1877546	.	CACAT	C	907.98	PASS	AB=1.000;AC=8;AF=0.143;AN=56;BaseQRankSum=8.025;DP=716;FS=7.649;HRun=0;HaplotypeScore=124.2121;InbreedingCoeff=0.4356;MQ=55.06;MQ0=20;MQRankSum=-3.492;QD=6.49;ReadPosRankSum=-1.512;VQSLOD=1.6221;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:13,45:58:27.84:552,28,0	0/1:12,0:12:0.59:1,0,403	0/1:18,0:5:7.96:8,0,56	0/0:22,0:12:7.94:0,8,168	0/0:27,0:27:68.91:0,69,984	0/0:28,0:26:68.32:0,68,981	0/0:21,0:21:13.51:0,14,542	0/0:25,0:25:6.87:0,7,521	0/1:18,0:18:53.62:94,0,54	0/0:43,0:40:67.04:0,67,1559	0/0:20,0:19:41.86:0,42,774	0/0:21,0:21:26.12:0,26,964	0/0:23,0:22:56.46:0,56,1034	0/0:28,0:27:73.88:0,74,937	0/0:20,0:20:19.75:0,20,820	0/0:22,0:22:53.03:0,53,1273	1/1:9,14:22:26.29:360,26,0	0/0:19,0:19:23.98:0,24,637	0/0:22,0:22:59.63:0,60,913	0/0:23,0:23:63.04:0,63,936	0/0:66,0:62:99:0,128,2079	0/0:35,0:34:73.10:0,73,1249	0/0:21,0:21:41.17:0,41,980	0/0:25,0:25:69.03:0,69,1336	0/0:17,0:17:39.01:0,39,718	0/0:24,0:20:59.75:0,60,760	0/0:24,0:24:20.77:0,21,262	0/1:11,0:11:32.81:33,0,210
chr10	1877550	.	T	TAC	390.22	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=6.147;DP=715;FS=0.677;HRun=0;HaplotypeScore=106.7000;InbreedingCoeff=0.3067;MQ=56.18;MQ0=20;MQRankSum=-5.485;QD=3.58;ReadPosRankSum=0.984;VQSLOD=2.3182;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:58,0:58:52.41:96,0,52	0/0:13,0:13:33.06:0,33,373	0/0:19,0:7:2.01:0,2,98	0/0:23,0:14:15.04:0,15,178	0/0:26,0:26:48.15:0,48,579	0/0:26,0:24:60.16:0,60,692	0/0:21,0:21:32.99:0,33,362	0/0:24,0:24:37.91:0,38,463	1/1:12,4:16:21.07:315,21,0	0/0:43,0:40:40.55:0,41,659	0/0:21,0:20:38.67:0,39,412	0/0:23,0:23:49.37:0,49,564	0/0:21,0:20:45.10:0,45,519	0/0:27,0:26:47.92:0,48,556	0/0:21,0:21:42.94:0,43,474	0/0:21,0:21:51.14:0,51,600	0/1:24,0:23:19.64:88,0,20	0/0:18,0:18:24.59:0,25,322	0/0:21,0:22:44.71:0,45,453	0/0:22,0:22:48.14:0,48,569	0/0:66,0:62:99:0,104,1136	0/0:38,0:37:65.70:0,66,720	0/0:21,0:21:51.13:0,51,608	0/0:28,0:28:67.37:0,67,781	0/0:15,0:15:36.08:0,36,414	0/0:25,0:21:49.05:0,49,473	0/0:21,0:22:19.85:0,20,255	0/1:11,0:11:11.89:12,0,70
chr10	1877565	.	A	ACC	906.17	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=5.076;DP=667;FS=1.250;HRun=4;HaplotypeScore=113.0660;InbreedingCoeff=0.7138;MQ=69.52;MQ0=8;MQRankSum=-5.574;QD=9.64;ReadPosRankSum=-1.354;VQSLOD=-0.4364;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:47,3:50:41.14:507,41,0	0/0:12,0:12:33.09:0,33,421	0/0:29,0:19:48.02:0,48,485	0/0:24,0:20:47.86:0,48,459	0/0:22,0:22:57.12:0,57,694	0/0:24,0:22:57.17:0,57,742	0/0:15,0:15:41.99:0,42,496	0/0:24,0:24:60.11:0,60,689	0/1:17,0:17:54.63:146,0,55	0/0:34,0:33:77.36:0,77,877	0/0:17,0:17:38.89:0,39,455	0/0:22,0:22:63.02:0,63,720	0/0:20,0:20:53.31:0,53,619	0/0:23,0:23:56.93:0,57,686	0/0:19,0:19:54.04:0,54,618	0/0:22,0:22:51.14:0,51,646	1/1:24,3:27:31.30:383,31,0	0/0:16,0:16:38.82:0,39,416	0/0:21,0:21:48.10:0,48,561	0/0:21,0:21:60.12:0,60,719	0/0:56,0:54:99:0,123,1418	0/0:25,0:25:66.16:0,66,819	0/0:24,0:24:60.13:0,60,734	0/0:27,0:27:69.14:0,69,844	0/0:19,0:19:47.11:0,47,539	0/0:26,0:23:45.66:0,46,601	0/0:23,0:23:30.73:0,31,383	0/0:8,0:8:1.90:0,2,108
chr10	1878146	.	TGG	T	1075.57	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=8.997;DP=429;FS=2.805;HRun=11;HaplotypeScore=57.7051;InbreedingCoeff=0.8654;MQ=55.29;MQ0=39;MQRankSum=-2.824;QD=12.09;ReadPosRankSum=1.808;VQSLOD=1.5135;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:17,8:27:38.76:377,39,0	0/0:5,0:5:8.90:0,9,94	0/0:48,0:5:8.61:0,9,73	0/0:54,0:13:13.11:0,13,131	0/0:14,0:13:18.01:0,18,209	0/0:16,0:14:39.07:0,39,530	0/0:12,0:12:29.91:0,30,360	0/0:13,0:12:17.97:0,18,163	1/1:2,5:7:15.04:159,15,0	0/0:18,0:18:26.48:0,26,355	0/0:14,1:14:20.96:0,21,261	0/0:9,0:7:12.01:0,12,141	0/0:9,0:9:18.01:0,18,250	0/0:9,0:9:4.39:0,4,88	0/0:11,0:10:18.06:0,18,271	0/0:13,0:13:19.53:0,20,258	1/1:5,10:17:32.79:326,33,0	0/0:10,0:9:15.49:0,15,177	0/0:11,0:8:10.89:0,11,263	0/0:13,0:12:20.48:0,20,218	0/0:14,0:14:11.91:0,12,172	0/0:7,0:7:9.03:0,9,136	0/0:11,0:12:11.84:0,12,202	0/0:11,0:12:12.96:0,13,186	0/0:13,0:10:21.05:0,21,287	1/1:11,2:18:32.15:212,32,0	1/1:8,0:13:28.73:139,29,0	1/1:2,0:4:5.84:41,6,0
chr10	1878158	.	TTC	T	219.74	PASS	AB=0.954;AC=18;AF=0.321;AN=56;BaseQRankSum=2.224;DP=420;FS=33.901;HRun=0;HaplotypeScore=54.0202;InbreedingCoeff=-0.3310;MQ=48.46;MQ0=59;MQRankSum=-4.334;QD=0.86;ReadPosRankSum=-0.543;VQSLOD=0.0200;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:23,2:24:26.13:26,0,108	0/1:6,0:6:5.95:46,0,6	0/1:57,0:5:8.38:25,0,8	0/0:53,0:10:1.52:0,2,25	0/1:10,1:10:25.51:26,0,38	0/0:16,0:14:12.90:0,13,154	0/0:14,0:14:25.18:0,25,234	0/1:9,5:13:31.35:31,0,90	0/0:5,0:5:13.96:0,14,81	0/1:12,1:12:0.86:1,0,30	0/1:16,0:15:3.66:4,0,105	0/0:8,0:6:5.76:0,6,75	0/0:9,0:7:6.68:0,7,127	0/1:6,0:6:3.30:3,0,30	0/0:9,1:9:13.97:0,14,170	0/1:10,1:11:6.40:6,0,104	0/1:17,0:17:14.24:14,0,122	0/1:11,0:9:20.66:21,0,34	0/1:12,1:9:21.56:22,0,98	0/1:10,0:8:17.94:18,0,58	0/0:10,0:9:2.24:0,2,38	0/0:9,0:9:13.69:0,14,95	0/1:9,1:10:24.12:24,0,45	0/0:15,0:13:12.51:0,13,83	0/0:14,0:10:20.63:0,21,164	0/1:18,0:16:53.59:54,0,64	0/1:14,0:13:39.25:39,0,80	1/1:5,0:4:0.90:4,1,0
chr10	1878340	.	TTGCAGTA	T	647.61	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.012;DP=506;FS=0.000;HRun=0;HaplotypeScore=112.3567;InbreedingCoeff=0.9918;MQ=80.03;MQ0=0;MQRankSum=-5.239;QD=58.87;ReadPosRankSum=1.286;VQSLOD=3.4075;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:78.23:0,78,2763	0/0:9,0:9:21.07:0,21,779	0/0:22,0:22:45.13:0,45,1431	0/0:11,0:11:24.08:0,24,602	0/0:19,0:19:54.19:0,54,2060	0/0:15,0:15:42.14:0,42,1624	0/0:19,0:19:57.20:0,57,1959	0/0:24,0:24:48.15:0,48,1576	1/1:1,10:11:30.10:742,30,0	0/0:25,0:25:69.24:0,69,2540	0/0:18,0:18:54.19:0,54,2045	0/0:11,0:11:30.10:0,30,1119	0/0:15,0:15:42.10:0,42,1403	0/0:12,0:12:36.12:0,36,1375	0/0:24,0:24:63.22:0,63,2401	0/0:15,0:15:45.15:0,45,1655	0/0:24,0:24:72.23:0,72,2679	0/0:11,0:11:33.11:0,33,1242	0/0:17,0:17:42.14:0,42,1564	0/0:26,0:26:72.25:0,72,2737	0/0:20,0:20:54.19:0,54,2049	0/0:18,0:18:45.14:0,45,1607	0/0:16,0:16:45.15:0,45,1687	0/0:12,0:12:36.12:0,36,1393	0/0:16,0:16:42.14:0,42,1525	0/0:29,0:29:75.26:0,75,2858	0/0:28,0:28:78.27:0,78,2961	0/0:11,0:11:30.10:0,30,1160
chr10	1878507	.	AAGG	A	216.32	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.280;DP=681;FS=0.000;HRun=0;HaplotypeScore=107.8593;InbreedingCoeff=0.9763;MQ=88.99;MQ0=0;MQRankSum=-2.606;QD=27.04;ReadPosRankSum=0.377;VQSLOD=3.7676;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,141,3149	0/0:5,0:5:15.05:0,15,346	0/0:27,0:27:66.20:0,66,1376	0/0:25,0:25:49.03:0,49,1381	0/0:28,0:28:75.26:0,75,1729	0/0:17,0:17:51.18:0,51,1162	0/0:29,0:29:81.27:0,81,1800	0/0:34,0:34:99:0,102,2228	1/1:1,7:8:18.06:307,18,0	0/0:23,0:23:69.24:0,69,1564	0/0:18,0:18:54.18:0,54,1179	0/0:20,0:20:60.21:0,60,1376	0/0:28,0:28:78.27:0,78,1777	0/0:23,0:23:69.24:0,69,1570	0/0:30,0:30:90.31:0,90,2035	0/0:30,0:30:90.31:0,90,2050	0/0:19,0:19:51.18:0,51,1176	0/0:19,0:19:54.66:0,55,1186	0/0:20,0:20:60.21:0,60,1373	0/0:23,0:23:60.21:0,60,1375	0/0:43,0:43:99:0,129,2950	0/0:27,0:27:81.28:0,81,1849	0/0:17,0:17:48.16:0,48,1107	0/0:12,0:10:36.12:0,36,830	0/0:24,0:23:66.23:0,66,1523	0/0:33,0:33:99:0,99,2280	0/0:37,0:37:99:0,108,2455	0/0:13,0:13:39.13:0,39,899
chr10	1879213	.	TG	T	2172.24	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=5.039;DP=549;FS=19.690;HRun=4;HaplotypeScore=96.6519;InbreedingCoeff=0.8888;MQ=96.21;MQ0=2;MQRankSum=-4.602;QD=18.41;ReadPosRankSum=-1.312;VQSLOD=2.0371;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:19,2:21:49.04:297,49,0	0/0:12,0:12:33.09:0,33,429	0/0:89,0:49:72.74:0,73,767	0/0:114,0:59:99:0,110,958	0/0:11,0:11:33.08:0,33,424	0/0:7,0:7:21.04:0,21,271	0/0:13,0:13:33.57:0,34,445	1/1:16,12:27:68.93:711,69,0	1/1:13,0:13:29.90:119,30,0	0/0:14,0:14:36.59:0,37,495	0/0:14,0:15:39.10:0,39,504	0/1:7,0:7:11.32:11,0,149	0/0:8,0:8:15.05:0,15,209	0/0:7,0:7:18.04:0,18,232	0/0:11,0:11:33.11:0,33,459	0/0:9,0:9:27.06:0,27,340	1/1:15,1:16:30.05:232,30,0	0/0:10,0:10:30.05:0,30,395	0/0:17,0:17:36.62:0,37,559	0/0:27,0:27:47.41:0,47,929	0/0:11,0:11:26.97:0,27,333	0/0:11,0:10:20.62:0,21,247	0/0:14,0:14:42.07:0,42,520	0/0:12,0:12:30.07:0,30,383	0/0:17,0:17:38.89:0,39,550	1/1:4,18:22:24.48:658,24,0	1/1:2,7:9:27.03:293,27,0	1/1:2,0:2:5.99:47,6,0
chr10	1879217	.	GT	G	365.75	PASS	AB=0.970;AC=7;AF=0.125;AN=56;BaseQRankSum=4.897;DP=557;FS=1.222;HRun=10;HaplotypeScore=107.7302;InbreedingCoeff=0.4854;MQ=97.13;MQ0=3;MQRankSum=-5.915;QD=4.69;ReadPosRankSum=-0.339;VQSLOD=1.2626;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:23.75:0,24,209	0/0:12,0:12:9.56:0,10,299	0/0:91,1:50:72.18:0,72,618	0/0:116,0:60:99:0,104,866	0/0:12,0:12:33.07:0,33,349	0/0:7,0:7:17.98:0,18,184	0/0:13,1:14:13.01:0,13,345	0/1:30,0:29:48.53:152,0,49	0/0:12,0:12:30.51:0,31,139	0/0:14,1:15:18.97:0,19,406	0/0:14,0:14:36.04:0,36,376	0/1:6,0:6:5.05:5,0,110	0/0:5,0:5:15.04:0,15,166	0/0:6,0:6:15.03:0,15,157	0/0:11,0:11:33.09:0,33,365	0/0:9,0:9:21.06:0,21,232	0/0:18,0:18:21.70:0,22,187	0/0:12,0:12:33.05:0,33,346	0/0:18,1:19:19.04:0,19,415	0/0:28,0:28:47.79:0,48,691	0/1:9,1:10:2.01:2,0,190	0/0:9,1:9:24.01:0,24,236	0/0:14,0:14:33.09:0,33,365	0/0:10,0:10:24.05:0,24,257	0/0:17,1:18:21.96:0,22,430	1/1:22,0:22:27.64:251,28,0	1/1:10,0:10:5.40:80,5,0	0/0:2,0:2:1.77:0,2,4
chr10	1879218	.	T	TTA	532.37	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.301;DP=556;FS=9.868;HRun=0;HaplotypeScore=117.9445;InbreedingCoeff=0.8729;MQ=97.10;MQ0=3;MQRankSum=-4.068;QD=40.95;ReadPosRankSum=-0.135;VQSLOD=4.9276;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:60.14:0,60,816	0/0:12,0:12:36.10:0,36,491	0/0:94,0:51:99:0,115,1292	0/0:117,0:59:99:0,139,1619	0/0:12,0:12:36.10:0,36,509	0/0:7,0:7:21.06:0,21,301	0/0:14,0:14:42.11:0,42,581	0/0:28,0:27:70.68:0,71,812	1/1:2,11:13:39.11:627,39,0	0/0:15,0:15:45.10:0,45,637	0/0:14,0:14:42.08:0,42,576	0/0:6,0:6:18.05:0,18,254	0/0:5,0:5:15.05:0,15,229	0/0:6,0:6:18.05:0,18,238	0/0:11,0:11:33.11:0,33,504	0/0:9,0:9:27.08:0,27,376	0/0:18,0:18:43.22:0,43,572	0/0:12,0:12:33.11:0,33,503	0/0:19,0:19:54.14:0,54,742	0/0:28,0:28:84.12:0,84,1142	0/0:10,0:10:30.03:0,30,389	0/0:10,0:9:27.08:0,27,383	0/0:14,0:14:41.49:0,41,566	0/0:10,0:10:30.08:0,30,419	0/0:18,0:18:51.14:0,51,718	0/0:22,0:22:63.50:0,63,691	0/0:10,0:10:30:0,30,313	0/0:2,0:2:6.02:0,6,89
chr10	1879227	.	T	TC	924.32	PASS	AB=0.957;AC=12;AF=0.214;AN=56;BaseQRankSum=10.380;DP=542;FS=5.805;HRun=4;HaplotypeScore=105.7640;InbreedingCoeff=0.7473;MQ=97.93;MQ0=3;MQRankSum=-1.638;QD=3.46;ReadPosRankSum=-0.438;VQSLOD=-0.4471;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:22:46.34:271,46,0	0/0:12,0:12:33:0,33,350	0/1:81,2:48:99:124,0,224	0/1:104,4:60:99:142,0,254	0/0:14,0:14:39.02:0,39,390	0/0:9,0:9:27.03:0,27,276	0/0:12,0:12:36.02:0,36,388	0/0:28,0:27:78.01:0,78,728	0/0:13,0:13:29.77:0,30,127	0/0:20,0:20:57.03:0,57,583	0/0:15,0:15:36.05:0,36,377	0/0:6,0:6:8.98:0,9,87	0/0:6,0:6:18.04:0,18,195	0/0:5,0:5:12.02:0,12,126	0/0:12,0:12:36.07:0,36,386	0/0:7,0:7:21.06:0,21,234	1/1:15,1:16:22.77:233,23,0	0/0:12,0:12:36.08:0,36,393	0/0:19,0:19:53.87:0,54,543	0/0:25,0:25:72.15:0,72,779	0/0:10,0:10:23.91:0,24,228	0/0:11,0:10:30.04:0,30,307	0/0:14,0:14:42.06:0,42,441	0/0:8,0:8:21.06:0,21,237	0/0:17,0:17:47.71:0,48,487	1/1:21,0:21:46.74:185,47,0	1/1:8,1:9:21.87:112,22,0	1/1:3,0:3:7.06:35,7,0
chr10	1879239	.	AT	A	1679.38	PASS	AB=0.887;AC=16;AF=0.286;AN=56;BaseQRankSum=10.770;DP=465;FS=1.558;HRun=10;HaplotypeScore=81.2816;InbreedingCoeff=0.7718;MQ=83.72;MQ0=2;MQRankSum=-6.970;QD=12.92;ReadPosRankSum=0.775;VQSLOD=3.7609;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,18:19:50.99:443,51,0	0/1:10,1:11:1.99:2,0,208	0/0:50,0:31:16.20:0,16,312	0/0:71,1:37:9.01:0,9,180	0/0:14,1:15:19.06:0,19,430	0/0:8,0:8:21.06:0,21,232	0/0:15,0:15:33.09:0,33,365	1/1:7,25:31:41.76:588,42,0	1/1:0,11:11:32.99:286,33,0	0/0:22,0:22:57.15:0,57,630	0/0:14,1:15:10.04:0,10,332	0/0:5,0:5:9.02:0,9,99	0/0:4,0:4:12.03:0,12,128	0/0:4,0:4:6.02:0,6,66	0/0:10,0:10:24.06:0,24,266	0/0:7,0:7:18.05:0,18,199	1/1:2,13:15:44.20:368,44,0	0/0:11,0:11:30.06:0,30,322	0/0:22,2:24:14.05:0,14,597	0/0:24,0:24:63.16:0,63,690	0/0:9,0:9:21.06:0,21,232	0/1:10,2:11:22.03:22,0,235	0/0:15,0:15:45.12:0,45,497	0/0:7,0:7:18.05:0,18,199	0/0:15,1:16:16.06:0,16,405	1/1:1,0:20:38.70:113,39,0	1/1:1,0:7:10.18:30,10,0	1/1:0,0:3:6.11:18,6,0
chr10	1880347	.	C	CA	156.20	PASS	AB=0.750;AC=7;AF=0.175;AN=40;BaseQRankSum=0.327;DP=139;FS=7.478;HRun=3;HaplotypeScore=27.3309;InbreedingCoeff=0.2716;MQ=82.47;MQ0=20;MQRankSum=-2.379;QD=11.16;ReadPosRankSum=-1.003;VQSLOD=0.6605;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,7:7:9.03:142,9,0	./.	0/0:35,0:8:2.07:0,2,139	0/0:41,0:12:30.46:0,30,276	0/0:2,0:2:6.02:0,6,83	0/0:2,0:2:6.02:0,6,80	0/1:2,1:3:35.92:42,0,36	0/0:9,0:9:27.09:0,27,374	1/1:0,2:2:3.01:48,3,0	0/0:1,0:1:3.01:0,3,42	0/0:6,0:4:12.04:0,12,168	0/0:5,0:5:12.04:0,12,168	./.	0/0:3,0:2:3.01:0,3,39	./.	0/0:1,0:1:3.01:0,3,42	1/1:0,2:1:3.01:34,3,0	0/0:2,0:1:3.01:0,3,42	0/0:4,0:1:3.01:0,3,42	0/0:1,0:1:3.01:0,3,42	./.	./.	0/0:1,0:1:3.01:0,3,42	0/0:2,0:1:3.01:0,3,31	./.	0/0:5,0:5:11.79:0,12,165	./.	./.
chr10	1880355	.	CCCCCT	C	728.33	PASS	AB=1.000;AC=11;AF=0.324;AN=34;BaseQRankSum=1.494;DP=111;FS=3.185;HRun=0;HaplotypeScore=31.6628;InbreedingCoeff=0.4349;MQ=85.26;MQ0=13;MQRankSum=-3.255;QD=12.78;ReadPosRankSum=0.568;VQSLOD=1.3846;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,5:7:6.02:123,6,0	./.	0/0:21,0:6:4.78:0,5,76	0/1:32,0:12:1.71:2,0,179	0/0:1,0:1:3.01:0,3,91	0/0:2,0:2:6.02:0,6,147	0/0:2,0:2:2.99:0,3,90	1/1:2,7:9:21.07:410,21,0	1/1:1,1:2:3.01:34,3,0	0/0:1,0:1:3.01:0,3,60	0/0:6,0:4:9.03:0,9,214	0/0:5,0:5:12.04:0,12,330	./.	0/0:3,0:2:3.01:0,3,91	./.	0/0:1,0:1:3.01:0,3,91	./.	0/0:2,0:1:3.01:0,3,91	./.	./.	./.	./.	0/0:1,0:1:3.01:0,3,90	1/1:2,0:1:3.01:31,3,0	./.	1/1:0,5:5:12.04:248,12,0	./.	./.
chr10	1884466	.	TC	T	804	PASS	AB=0.769;AC=9;AF=0.180;AN=50;BaseQRankSum=10.952;DP=605;FS=5.695;HRun=2;HaplotypeScore=75.1547;InbreedingCoeff=0.5360;MQ=37.92;MQ0=42;MQRankSum=-4.115;QD=6.09;ReadPosRankSum=4.398;VQSLOD=0.9928;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:2:1.94:0,2,43	0/1:14,5:18:74.46:74,0,487	0/0:29,0:3:9.03:0,9,122	0/0:24,0:6:18.03:0,18,232	0/0:29,0:27:72.24:0,72,1056	0/0:25,0:23:69.19:0,69,969	0/0:14,0:14:42.14:0,42,629	./.	./.	0/1:39,14:49:99:178,0,1515	0/1:21,13:32:99:153,0,786	0/0:27,0:24:69.23:0,69,1031	0/0:25,0:24:72.24:0,72,1068	0/0:19,0:17:45.15:0,45,662	0/0:19,0:17:51.13:0,51,708	0/0:18,0:17:51.17:0,51,746	./.	0/0:20,0:16:42.14:0,42,629	0/0:26,0:17:41.26:0,41,578	0/0:35,0:33:96.33:0,96,1436	0/0:39,0:36:99:0,99,1459	0/0:29,0:25:75.25:0,75,1103	0/0:26,0:25:69.19:0,69,999	0/0:34,0:33:72.54:0,73,1119	0/0:12,0:12:33.01:0,33,422	1/1:0,6:5:15.02:143,15,0	1/1:1,7:8:19.61:174,20,0	1/1:2,10:8:24.04:233,24,0
chr10	1884469	.	AT	A	828.93	PASS	AB=0.777;AC=9;AF=0.180;AN=50;BaseQRankSum=11.012;DP=610;FS=2.732;HRun=2;HaplotypeScore=74.8187;InbreedingCoeff=0.5379;MQ=37.79;MQ0=41;MQRankSum=-3.822;QD=6.01;ReadPosRankSum=3.725;VQSLOD=1.0902;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:2:3.01:0,3,45	0/1:15,5:18:71.42:71,0,522	0/0:22,0:3:9.03:0,9,134	0/0:21,0:6:11.77:0,12,179	0/0:28,0:27:69.19:0,69,999	0/0:23,0:23:57.15:0,57,827	0/0:14,0:14:42.14:0,42,629	./.	./.	0/1:41,14:49:99:178,0,1514	0/1:23,13:32:99:159,0,675	0/0:26,0:24:69.09:0,69,935	0/0:26,0:24:69.20:0,69,1008	0/0:18,0:17:42.10:0,42,603	0/0:18,0:17:42.03:0,42,555	0/0:19,0:17:45.12:0,45,649	./.	0/0:22,0:16:42.12:0,42,606	0/0:28,0:17:29.57:0,30,512	0/0:34,0:33:96.17:0,96,1332	0/0:39,0:36:99:0,99,1481	0/0:35,0:25:69.23:0,69,1032	0/0:26,0:25:69.23:0,69,1025	0/0:35,0:34:78.21:0,78,1143	0/0:13,0:12:36.12:0,36,530	1/1:0,6:5:15.02:143,15,0	1/1:2,7:8:23.94:196,24,0	1/1:2,10:8:24.04:233,24,0
chr10	1884742	.	G	GT	1981.26	PASS	AC=22;AF=1.000;AN=22;DP=498;FS=0.000;HRun=1;HaplotypeScore=14.8268;InbreedingCoeff=-0.0860;MQ=11.60;MQ0=246;QD=12.70;VQSLOD=1.9516;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	1/1:1,3:3:9.03:135,9,0	./.	./.	1/1:4,9:9:27.09:400,27,0	./.	./.	./.	./.	1/1:4,13:13:36.12:539,36,0	1/1:7,4:4:12.04:176,12,0	./.	1/1:16,1:1:3.01:45,3,0	./.	./.	./.	./.	./.	./.	1/1:2,6:6:15.05:224,15,0	./.	1/1:13,9:8:21.07:314,21,0	1/1:11,3:2:6.02:87,6,0	./.	./.	1/1:10,1:1:3.01:45,3,0	1/1:23,1:1:3.01:45,3,0	1/1:13,2:1:3.01:45,3,0
chr10	1887080	.	ACG	A	999.27	PASS	AB=0.893;AC=10;AF=0.179;AN=56;BaseQRankSum=11.789;DP=601;FS=0.867;HRun=0;HaplotypeScore=99.4285;InbreedingCoeff=0.4339;MQ=55.72;MQ0=17;MQRankSum=-0.366;QD=6.80;ReadPosRankSum=-1.145;VQSLOD=3.2171;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:31,0:30:45.70:351,46,0	0/0:3,0:3:4.87:0,5,26	0/1:21,0:11:9.44:9,0,195	0/0:31,0:18:24.17:0,24,340	0/1:16,0:16:1.81:2,0,204	0/0:20,0:20:13.81:0,14,390	0/0:29,0:29:39.98:0,40,709	0/1:4,12:16:32.31:224,0,32	1/1:25,0:25:37.88:305,38,0	0/0:19,0:18:22.89:0,23,474	0/1:12,0:10:1.57:2,0,146	0/0:21,0:21:12.14:0,12,536	0/0:20,0:20:28.95:0,29,613	0/0:26,0:26:59.78:0,60,711	0/0:31,0:30:14.07:0,14,821	0/0:13,0:13:10.73:0,11,446	1/1:26,0:25:1.44:248,1,0	0/0:9,0:9:26.80:0,27,324	0/0:14,0:12:32.79:0,33,405	0/0:15,0:14:37.68:0,38,467	0/0:84,1:84:41.96:0,42,2146	0/0:16,0:16:29.70:0,30,465	0/0:9,0:9:20.90:0,21,228	0/0:33,0:32:40.76:0,41,875	0/0:19,0:18:0.25:0,0,349	0/0:20,0:19:36.34:0,36,369	0/0:16,0:16:20.87:0,21,169	0/0:5,0:5:11.85:0,12,103
chr10	1888441	.	CT	C	4050.83	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=13.094;DP=530;FS=0.382;HRun=5;HaplotypeScore=57.6607;InbreedingCoeff=0.9888;MQ=88.94;MQ0=0;MQRankSum=-1.064;QD=29.35;ReadPosRankSum=2.059;VQSLOD=4.1211;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,22:24:57.16:646,57,0	0/0:3,0:3:9.03:0,9,123	0/0:25,0:25:69.21:0,69,912	0/0:14,0:14:35.76:0,36,440	0/0:25,0:25:72.24:0,72,984	0/0:17,0:16:48.11:0,48,620	0/0:12,0:12:30.10:0,30,410	1/1:2,22:24:66.19:748,66,0	1/1:2,19:21:57.16:646,57,0	0/0:18,0:18:51.16:0,51,683	0/0:28,0:28:81.25:0,81,1076	0/0:9,0:9:27.09:0,27,369	0/0:13,0:13:39.13:0,39,533	0/0:15,0:15:42.13:0,42,558	0/0:22,0:22:66.21:0,66,887	0/0:23,1:24:35.16:0,35,808	1/1:0,11:11:27.08:306,27,0	0/0:17,0:17:45.15:0,45,615	0/0:18,0:18:45.14:0,45,602	0/0:17,0:17:51.17:0,51,698	0/0:27,0:27:81.25:0,81,1089	0/0:15,0:15:39.12:0,39,518	0/0:21,0:21:63.18:0,63,828	0/0:30,0:30:84.28:0,84,1149	0/0:22,0:22:57.17:0,57,739	1/1:3,22:25:31.12:718,31,0	1/1:0,21:21:54.15:612,54,0	1/1:1,11:12:33.09:374,33,0
chr10	1888632	.	ATT	A	1515.70	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=5.126;DP=455;FS=0.525;HRun=12;HaplotypeScore=62.0793;InbreedingCoeff=0.9754;MQ=69.36;MQ0=0;MQRankSum=0.340;QD=24.06;ReadPosRankSum=0.832;VQSLOD=3.4073;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:63.20:0,63,912	0/0:5,0:6:14.54:0,15,188	0/0:13,0:13:26.49:0,26,295	0/0:10,0:10:11.27:0,11,202	0/0:17,1:23:30.54:0,31,633	0/0:18,0:19:50.64:0,51,703	0/0:12,0:12:30.09:0,30,429	0/0:7,0:26:43.54:0,44,152	0/0:14,0:15:35.61:0,36,499	0/0:20,0:20:54.18:0,54,785	0/0:17,0:18:44.12:0,44,594	0/0:10,0:10:30.10:0,30,446	0/0:15,0:15:39.10:0,39,540	0/0:7,0:7:21.07:0,21,313	0/0:11,0:11:33.09:0,33,454	0/0:13,0:13:36.11:0,36,518	0/0:14,0:14:33.11:0,33,490	0/0:21,0:21:60.15:0,60,831	0/0:15,0:19:53.65:0,54,720	0/0:17,0:17:48.15:0,48,694	0/0:11,0:11:33.07:0,33,434	0/0:18,0:19:47.64:0,48,660	0/0:15,0:16:47.13:0,47,624	0/0:7,0:7:18.03:0,18,229	0/0:24,0:24:72.21:0,72,1034	1/1:1,25:26:75.16:762,75,0	1/1:3,20:24:50.84:500,51,0	1/1:0,13:13:39.09:397,39,0
chr10	1889478	.	AGTGCAACT	A	1033.02	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.475;DP=857;FS=0.990;HRun=0;HaplotypeScore=208.5477;InbreedingCoeff=0.9996;MQ=82.78;MQ0=0;MQRankSum=-5.720;QD=54.37;ReadPosRankSum=0.855;VQSLOD=3.5950;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,138,5788	0/0:12,0:12:36.12:0,36,1546	0/0:37,0:36:84.75:0,85,3015	0/0:44,0:39:87.58:0,88,3272	0/0:22,0:22:63.20:0,63,2570	0/0:27,0:27:69.22:0,69,2753	0/0:33,0:33:93.32:0,93,3882	0/0:23,0:23:54.18:0,54,2045	1/1:3,16:19:42.14:1128,42,0	0/0:32,0:32:84.25:0,84,3134	0/0:24,0:24:66.23:0,66,2800	0/0:26,0:26:78.27:0,78,3225	0/0:20,0:20:48.16:0,48,1873	0/0:34,0:34:96.33:0,96,3950	0/0:45,0:45:99:0,117,4895	0/0:32,0:32:84.29:0,84,3611	0/0:28,0:28:81.28:0,81,3268	0/0:12,0:12:33.11:0,33,1241	0/0:27,0:27:78.24:0,78,2990	0/0:34,0:34:84.29:0,84,3515	0/0:67,0:67:99:0,193,8003	0/0:31,0:31:84.29:0,84,3511	0/0:30,0:30:81.28:0,81,3285	0/0:28,0:27:75.26:0,75,3062	0/0:24,0:24:69.24:0,69,2955	0/0:33,0:33:99:0,99,3930	0/0:38,0:38:96.33:0,96,3889	0/0:22,0:22:60.21:0,60,2468
chr10	1890076	.	T	TCC	576.64	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=6.760;DP=346;FS=4.165;HRun=9;HaplotypeScore=50.8342;InbreedingCoeff=0.8408;MQ=63.33;MQ0=16;MQRankSum=-2.955;QD=8.87;ReadPosRankSum=-2.044;VQSLOD=-0.4414;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,1:13:18.50:197,18,0	0/0:5,0:4:12.03:0,12,128	0/0:40,0:17:35.71:0,36,308	0/0:61,0:15:14.54:0,15,174	0/0:6,0:6:18.05:0,18,192	0/0:4,0:4:12.03:0,12,128	0/0:13,0:12:33.08:0,33,351	0/1:14,0:13:0:0,0,0	1/1:5,0:5:11.99:101,12,0	0/0:8,0:8:21.05:0,21,219	0/0:15,0:15:29.82:0,30,373	0/0:3,0:3:9.02:0,9,96	0/0:7,0:7:14.69:0,15,138	0/0:11,0:11:30.07:0,30,319	0/0:6,0:6:12.02:0,12,128	0/0:4,0:4:12.03:0,12,128	1/1:5,2:8:9.02:110,9,0	0/0:17,0:18:36.03:0,36,438	0/0:16,0:14:36.09:0,36,383	0/0:12,0:12:21:0,21,214	0/0:14,0:13:27.05:0,27,287	0/0:7,0:7:15.02:0,15,152	0/0:12,0:12:30.08:0,30,319	0/0:10,0:10:20.99:0,21,204	0/0:8,0:8:21.05:0,21,224	1/1:2,5:7:17.42:223,17,0	1/1:7,3:11:6:66,6,0	1/1:6,0:6:3.01:46,3,0
chr10	1890080	.	C	CCCCA	465.75	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=6.207;DP=362;FS=9.595;HRun=0;HaplotypeScore=66.5391;InbreedingCoeff=0.4328;MQ=67.43;MQ0=16;MQRankSum=-3.222;QD=9.51;ReadPosRankSum=-0.204;VQSLOD=0.8895;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:13:12.34:93,12,0	0/0:5,0:4:12.04:0,12,218	0/0:42,0:19:36.50:0,36,652	0/0:64,0:17:6.68:0,7,348	0/0:7,0:7:21.04:0,21,348	0/0:5,0:5:15.04:0,15,244	0/0:12,0:11:33.11:0,33,599	0/0:12,0:11:2.96:0,3,19	1/1:1,5:6:15.05:369,15,0	0/0:10,0:10:24.05:0,24,401	0/0:14,0:14:39.03:0,39,669	0/0:3,0:3:9.03:0,9,163	0/0:7,0:7:18.05:0,18,294	0/0:10,0:10:30.10:0,30,545	0/0:6,0:6:15.04:0,15,242	0/0:4,0:4:12.04:0,12,213	0/1:11,0:11:6.23:72,0,6	0/0:20,0:20:53.98:0,54,841	0/0:15,0:13:36.12:0,36,654	0/0:16,0:16:32.96:0,33,497	0/0:15,0:14:36.03:0,36,547	0/0:8,0:8:15.05:0,15,268	0/0:12,0:12:30.10:0,30,545	0/0:10,0:10:21.07:0,21,370	0/0:9,0:9:24.07:0,24,408	0/1:9,0:9:59.75:60,0,60	0/1:10,0:10:4.40:4,0,61	0/0:7,0:7:0.49:0,0,36
chr10	1892521	.	GCTT	G	293.19	PASS	AB=0.933;AC=3;AF=0.054;AN=56;BaseQRankSum=4.231;DP=555;FS=0.000;HRun=0;HaplotypeScore=75.1071;InbreedingCoeff=0.6953;MQ=87.98;MQ0=0;MQRankSum=-3.262;QD=11.73;ReadPosRankSum=2.695;VQSLOD=3.2121;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:72.24:0,72,1549	0/0:7,0:7:21.07:0,21,463	0/0:30,0:30:80.64:0,81,1687	0/0:26,0:26:66.23:0,66,1403	0/0:28,0:28:84.27:0,84,1766	0/0:20,0:20:60.21:0,60,1325	0/0:22,0:22:57.20:0,57,1258	0/0:21,0:21:57.20:0,57,1258	1/1:0,11:11:24.08:386,24,0	0/0:20,0:20:48.16:0,48,1060	0/0:22,0:22:66.23:0,66,1441	0/0:16,0:16:48.16:0,48,1060	0/0:15,0:15:39.13:0,39,861	0/0:19,0:19:54.14:0,54,1107	0/0:16,0:16:48.15:0,48,1019	0/1:13,1:14:5.99:6,0,818	0/0:21,0:21:63.19:0,63,1342	0/0:28,0:27:84.27:0,84,1806	0/0:27,0:27:78.27:0,78,1709	0/0:23,0:23:69.22:0,69,1456	0/0:22,0:22:63.20:0,63,1332	0/0:28,0:28:78.02:0,78,1675	0/0:19,0:19:54.19:0,54,1172	0/0:15,0:15:45.15:0,45,993	0/0:15,0:15:42.13:0,42,860	0/0:15,0:15:42.14:0,42,928	0/0:17,0:17:45.11:0,45,947	0/0:11,0:11:33.11:0,33,729
chr10	1893246	.	T	TC	522.14	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=6.079;DP=585;FS=4.837;HRun=3;HaplotypeScore=68.3573;InbreedingCoeff=0.8914;MQ=52.93;MQ0=22;MQRankSum=-4.878;QD=19.34;ReadPosRankSum=-0.485;VQSLOD=3.0328;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:72.13:0,72,846	0/0:11,0:11:30.09:0,30,359	0/0:18,0:4:6.02:0,6,71	0/0:22,0:6:18.05:0,18,215	0/0:11,0:11:33.09:0,33,385	0/0:16,0:16:48.15:0,48,576	0/0:27,0:25:69.21:0,69,828	0/0:24,0:16:42.13:0,42,504	0/0:23,0:21:36.11:0,36,432	0/0:25,0:25:75.23:0,75,899	0/0:10,0:10:27.08:0,27,324	0/0:24,0:24:66.20:0,66,792	0/0:23,0:22:60.15:0,60,704	0/0:25,0:25:72.22:0,72,863	0/0:17,0:17:45.14:0,45,540	0/0:28,0:28:84.25:0,84,997	0/0:26,0:26:57.17:0,57,681	0/0:24,0:24:66.17:0,66,775	0/0:24,0:15:33.10:0,33,396	0/0:13,0:13:39.12:0,39,468	0/0:37,0:37:99:0,108,1295	0/0:14,0:14:33.10:0,33,396	0/0:15,0:15:39.12:0,39,468	0/0:36,0:36:99:0,105,1246	0/0:25,0:24:66.19:0,66,782	1/1:2,11:12:30.04:378,30,0	1/1:4,6:10:18.06:250,18,0	1/1:4,0:4:2.99:24,3,0
chr10	1893406	.	C	CT	2221.59	PASS	AC=4;AF=0.077;AN=52;BaseQRankSum=9.632;DP=752;FS=0.000;HRun=3;HaplotypeScore=101.2658;InbreedingCoeff=0.9812;MQ=53.97;MQ0=29;MQRankSum=2.488;QD=31.74;ReadPosRankSum=1.048;VQSLOD=3.2664;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,42:44:93.31:1300,93,0	0/0:8,0:8:24.07:0,24,288	./.	./.	0/0:31,0:31:93.28:0,93,1104	0/0:25,0:25:69.21:0,69,827	0/0:23,0:23:63.19:0,63,753	0/0:32,0:31:90.23:0,90,1059	0/0:30,0:28:72.22:0,72,861	0/0:39,0:39:96.26:0,96,1112	0/0:19,0:19:42.13:0,42,502	0/0:31,0:31:87.22:0,87,1043	0/0:34,0:34:96.74:0,97,1138	0/0:35,0:35:93.25:0,93,1090	0/0:27,0:27:75.21:0,75,880	0/0:31,0:31:93.26:0,93,1091	1/1:0,26:25:75.25:1042,75,0	0/0:31,0:30:84.26:0,84,1004	0/0:30,0:21:54.13:0,54,620	0/0:33,0:33:87.26:0,87,1041	0/0:40,0:38:99:0,105,1219	0/0:33,0:33:96.28:0,96,1135	0/0:22,0:22:57.15:0,57,661	0/0:35,0:35:96.29:0,96,1151	0/0:18,0:18:48.14:0,48,570	0/0:25,0:25:66.20:0,66,790	0/0:7,0:7:21.06:0,21,251	0/0:6,0:6:12.04:0,12,143
chr10	1895021	.	T	TC	257.79	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-2.031;DP=420;FS=28.187;HRun=5;HaplotypeScore=42.9333;InbreedingCoeff=0.8232;MQ=58.33;MQ0=13;MQRankSum=-0.488;QD=19.83;ReadPosRankSum=-1.552;VQSLOD=1.4567;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,102,1095	0/0:4,0:4:12.03:0,12,129	0/0:27,0:6:12.03:0,12,126	0/0:31,0:16:17.58:0,18,253	0/0:9,0:9:15.02:0,15,153	0/0:11,0:11:24.06:0,24,258	0/0:20,0:20:57.14:0,57,610	0/0:22,0:22:38.53:0,39,379	1/1:3,10:12:17.07:348,17,0	0/0:14,0:13:36.09:0,36,387	0/0:7,0:7:15.04:0,15,161	0/0:13,0:13:21.02:0,21,216	0/0:13,0:13:19.39:0,19,280	0/0:15,0:14:34.58:0,35,359	0/0:13,0:13:33.08:0,33,354	0/0:14,0:12:27.07:0,27,290	0/0:15,0:15:41.67:0,42,418	0/0:16,0:16:39.10:0,39,418	0/0:8,0:7:12.02:0,12,121	0/0:19,0:19:23.96:0,24,257	0/0:15,0:14:30.07:0,30,321	0/0:11,0:11:30.07:0,30,322	0/0:5,0:5:15.03:0,15,155	0/0:14,0:14:32.81:0,33,342	0/0:16,0:16:29.89:0,30,297	0/0:15,0:15:30.07:0,30,322	0/0:13,0:13:30.07:0,30,322	0/0:4,0:4:12.03:0,12,129
chr10	1896787	.	T	TA	794.19	PASS	AB=0.886;AC=4;AF=0.071;AN=56;BaseQRankSum=5.773;DP=306;FS=9.116;HRun=7;HaplotypeScore=35.3156;InbreedingCoeff=0.3302;MQ=79.58;MQ0=0;MQRankSum=0.600;QD=13.69;ReadPosRankSum=-4.674;VQSLOD=0.7176;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:30.03:0,30,283	0/0:5,0:5:9.01:0,9,87	0/1:13,0:14:10.90:11,0,100	0/0:5,0:5:11.97:0,12,106	0/0:13,0:13:33.05:0,33,319	0/0:21,0:21:57.09:0,57,550	0/0:4,0:4:3:0,3,29	1/1:15,20:35:60.96:877,61,0	0/1:7,1:8:18.03:18,0,58	0/0:14,0:14:33.05:0,33,319	0/0:8,0:8:21.02:0,21,197	0/0:5,0:5:12.02:0,12,116	0/0:12,0:12:33.05:0,33,319	0/0:6,0:6:18.03:0,18,174	0/0:6,0:6:15.02:0,15,145	0/0:4,0:4:12.02:0,12,116	0/0:18,0:18:39.02:0,39,363	0/0:18,0:18:48.01:0,48,448	0/0:12,0:12:16.35:0,16,273	0/0:10,0:10:27.04:0,27,260	0/0:4,0:4:6.01:0,6,58	0/0:5,0:5:12.02:0,12,116	0/0:7,0:7:15.02:0,15,145	0/0:2,0:2:6.01:0,6,58	0/0:14,0:14:36.02:0,36,335	0/0:15,0:15:33.04:0,33,319	0/0:19,0:19:42.03:0,42,399	0/0:10,0:10:21.03:0,21,203
chr10	1896804	.	T	TA	955.95	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-6.336;DP=291;FS=6.700;HRun=2;HaplotypeScore=32.4993;InbreedingCoeff=0.6516;MQ=68.30;MQ0=0;MQRankSum=-3.089;QD=30.84;ReadPosRankSum=0.930;VQSLOD=2.5653;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,10:10:27.09:388,27,0	0/0:3,0:3:9.03:0,9,111	0/0:5,0:4:8.45:0,8,87	0/0:6,0:6:12.03:0,12,138	0/0:11,0:11:33.10:0,33,408	0/0:25,0:25:75.19:0,75,912	0/0:1,0:1:3.01:0,3,37	0/0:38,0:38:99:0,106,1024	0/0:8,0:8:20.84:0,21,216	0/0:12,0:12:36.11:0,36,446	0/0:10,0:10:24.07:0,24,296	0/0:3,0:3:6.02:0,6,74	0/0:11,0:11:27.08:0,27,334	0/0:6,0:6:12.04:0,12,148	0/0:6,0:6:15.05:0,15,186	0/0:5,0:5:15.05:0,15,186	1/1:2,19:21:48.16:688,48,0	0/0:19,0:19:57.18:0,57,706	0/0:15,0:15:45.13:0,45,545	0/0:9,0:9:24.08:0,24,297	0/0:2,0:2:6.02:0,6,74	0/0:1,0:1:3.01:0,3,37	0/0:6,0:6:9.03:0,9,111	0/0:2,0:2:6.02:0,6,74	0/0:12,0:12:36.11:0,36,445	0/0:15,0:15:39.11:0,39,471	0/0:19,0:19:54.17:0,54,668	0/0:10,0:10:30.06:0,30,342
chr10	1897120	.	AG	A	701.38	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.754;DP=572;FS=5.484;HRun=1;HaplotypeScore=55.2134;InbreedingCoeff=0.8517;MQ=88.46;MQ0=0;MQRankSum=-2.151;QD=31.88;ReadPosRankSum=0.437;VQSLOD=3.0290;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,147,2324	0/0:13,0:13:39.13:0,39,615	0/0:16,0:16:48.16:0,48,746	0/0:24,0:24:40.29:0,40,942	0/0:16,0:16:48.16:0,48,766	0/0:22,0:22:66.22:0,66,1047	0/0:21,0:21:63.21:0,63,1007	0/0:31,0:31:90.28:0,90,1389	1/1:0,22:22:57.19:796,57,0	0/0:25,0:24:72.24:0,72,1131	0/0:13,0:13:39.13:0,39,615	0/0:14,0:14:42.14:0,42,663	0/0:17,0:17:51.17:0,51,811	0/0:22,0:22:66.21:0,66,1032	0/0:19,0:19:57.18:0,57,886	0/0:14,1:15:3.23:0,3,629	0/0:30,0:30:90.31:0,90,1438	0/0:17,0:17:51.11:0,51,762	0/0:18,0:18:54.18:0,54,860	0/0:12,0:12:36.12:0,36,575	0/0:31,0:31:93.30:0,93,1461	0/0:11,0:11:33.11:0,33,519	0/0:17,0:17:51.16:0,51,784	0/0:15,0:15:45.15:0,45,719	0/0:18,0:18:54.18:0,54,863	0/0:29,0:29:87.30:0,87,1388	0/0:28,0:28:84.29:0,84,1342	0/0:7,0:7:21.07:0,21,336
chr10	1897376	.	G	GT	1253.64	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-8.053;DP=718;FS=2.318;HRun=1;HaplotypeScore=73.7894;InbreedingCoeff=0.9989;MQ=78.72;MQ0=0;MQRankSum=-3.327;QD=37.99;ReadPosRankSum=0.583;VQSLOD=4.2485;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,111,1377	0/0:20,0:20:59.77:0,60,737	0/0:25,0:25:69.08:0,69,831	0/0:21,0:21:60.19:0,60,749	0/0:28,0:28:84.21:0,84,1038	0/0:37,0:37:99:0,108,1356	0/0:33,0:33:96.30:0,96,1231	0/0:34,0:34:99:0,102,1297	1/1:1,32:33:90.30:1349,90,0	0/0:25,0:25:69.22:0,69,895	0/0:20,0:20:57.17:0,57,725	0/0:20,0:20:60.20:0,60,779	0/0:24,0:24:66.31:0,66,875	0/0:25,0:25:72.23:0,72,935	0/0:27,0:27:78.24:0,78,990	0/0:19,0:19:57.16:0,57,710	0/0:16,0:16:48.16:0,48,622	0/0:9,0:9:27.02:0,27,315	0/0:31,0:31:93.30:0,93,1203	0/0:20,0:20:57.18:0,57,739	0/0:40,0:40:99:0,120,1554	0/0:21,0:21:63.17:0,63,774	0/0:17,0:17:51.17:0,51,660	0/0:27,0:27:81.26:0,81,1038	0/0:22,0:22:66.19:0,66,840	0/0:37,0:37:99:0,111,1427	0/0:34,0:34:99:0,102,1306	0/0:16,0:16:48.16:0,48,622
chr10	1897579	.	CTAAAGGTCACTGGCT	C	4738.45	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=10.000;DP=707;FS=4.994;HRun=0;HaplotypeScore=281.5191;InbreedingCoeff=0.9984;MQ=82.25;MQ0=0;MQRankSum=-9.553;QD=98.72;ReadPosRankSum=1.992;VQSLOD=4.0854;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,99,6182	0/0:14,0:14:36.12:0,36,2555	0/0:33,0:33:69.24:0,69,3789	0/0:30,0:28:66.19:0,66,3452	0/0:43,0:43:99:0,117,7765	0/0:29,0:29:81.28:0,81,5581	0/0:31,0:31:81.28:0,81,5026	0/0:27,0:27:69.24:0,69,4635	0/0:27,0:27:69.24:0,69,4882	0/0:26,0:26:69.23:0,69,4626	0/0:20,0:20:51.18:0,51,3379	0/0:20,0:20:54.16:0,54,3549	0/0:19,0:19:42.14:0,42,2747	0/0:19,0:19:51.18:0,51,3104	0/0:21,0:21:60.21:0,60,4040	0/0:21,0:20:48.16:0,48,2795	0/0:38,0:38:99:0,105,6673	0/0:26,0:26:69.20:0,69,4599	0/0:16,0:16:33.10:0,33,1760	0/0:16,0:16:39.13:0,39,2592	0/0:41,0:41:99:0,113,7243	0/0:27,0:27:75.24:0,75,4862	0/0:23,0:23:63.22:0,63,4247	0/0:39,0:39:99:0,105,7063	0/0:16,0:16:45.15:0,45,3182	1/1:4,17:21:51.18:2081,51,0	1/1:5,15:19:42.14:1754,42,0	1/1:0,7:7:21.07:903,21,0
chr10	1899632	.	G	GGGGA	1271.93	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=1.542;DP=358;FS=4.234;HRun=0;HaplotypeScore=69.4264;InbreedingCoeff=0.6108;MQ=72.81;MQ0=6;MQRankSum=-3.199;QD=16.31;ReadPosRankSum=-1.221;VQSLOD=2.9173;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:17,10:26:39.10:852,39,0	0/0:2,0:2:6.01:0,6,76	0/0:29,0:8:6.59:0,7,63	0/1:36,0:24:36.20:36,0,69	0/0:10,0:10:21.07:0,21,345	0/0:7,0:7:14.94:0,15,216	0/0:19,0:19:18.03:0,18,249	0/0:16,0:15:15.03:0,15,200	0/0:10,0:10:18.03:0,18,247	0/0:10,0:10:18.06:0,18,299	0/0:8,0:8:18.06:0,18,299	0/0:9,0:9:15.04:0,15,226	0/0:15,0:15:30.08:0,30,451	0/0:17,0:17:33.09:0,33,500	0/0:13,0:13:27.08:0,27,422	0/0:13,0:13:24.07:0,24,376	1/1:11,4:14:24.08:512,24,0	0/0:9,0:9:24.06:0,24,372	0/0:8,0:8:9.02:0,9,124	0/0:9,0:9:12.03:0,12,175	0/0:11,0:11:14.92:0,15,208	0/0:9,0:9:18.05:0,18,276	0/0:8,0:8:15.04:0,15,225	0/0:10,0:10:8.31:0,8,141	0/0:5,0:5:12.04:0,12,200	0/0:15,0:15:33.11:0,33,541	0/0:15,0:15:18.04:0,18,251	0/0:3,0:3:9.01:0,9,102
chr10	1899660	.	A	AG	1468.81	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=7.391;DP=343;FS=6.778;HRun=7;HaplotypeScore=51.5185;InbreedingCoeff=0.9393;MQ=77.94;MQ0=2;MQRankSum=-3.665;QD=14.69;ReadPosRankSum=0.242;VQSLOD=2.8367;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:25:47.39:368,47,0	0/0:5,0:5:14.81:0,15,124	0/0:30,0:15:5.87:0,6,202	0/0:22,0:16:17.25:0,17,200	0/0:14,0:14:36.03:0,36,339	0/0:8,0:8:21.03:0,21,203	0/0:9,0:9:24.02:0,24,225	1/1:5,9:15:27.04:291,27,0	1/1:8,0:8:20.77:139,21,0	0/0:13,0:13:30.04:0,30,290	0/0:9,0:9:24.02:0,24,222	0/0:11,0:11:21.02:0,21,203	0/0:10,0:10:30.03:0,30,283	0/0:15,0:15:27.02:0,27,254	0/0:10,0:10:30.02:0,30,282	0/0:10,0:10:27.03:0,27,255	1/1:19,0:18:44.72:337,45,0	0/0:9,0:9:24:0,24,223	0/0:8,0:8:17.86:0,18,159	0/0:12,0:12:33.04:0,33,313	0/0:8,0:8:15.01:0,15,140	0/0:13,0:13:33.04:0,33,313	0/0:7,0:7:15.02:0,15,144	0/0:6,0:6:12.01:0,12,116	0/0:14,0:14:36.02:0,36,335	1/1:19,0:19:28.16:265,28,0	1/1:11,0:11:29.80:221,30,0	1/1:2,0:2:5.94:41,6,0
chr10	1899661	.	G	GA	2868.39	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=-4.520;DP=344;FS=6.352;HRun=3;HaplotypeScore=46.4813;InbreedingCoeff=0.8636;MQ=78.04;MQ0=2;MQRankSum=-0.869;QD=28.68;ReadPosRankSum=2.240;VQSLOD=2.5876;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,21:24:53.66:754,54,0	0/0:5,0:5:15.05:0,15,199	0/0:30,0:15:23.71:0,24,343	0/0:20,0:16:22.07:0,22,289	0/0:14,0:14:42.11:0,42,550	0/0:8,0:8:24.07:0,24,320	0/0:9,0:9:27.07:0,27,354	0/1:15,0:15:25.31:25,0,49	1/1:0,8:8:21.07:314,21,0	0/0:14,0:14:39.07:0,39,494	0/0:9,0:9:27.08:0,27,356	0/0:11,0:11:33.01:0,33,387	0/0:10,0:10:30.10:0,30,418	0/0:15,0:15:39.03:0,39,467	0/0:11,0:11:30.10:0,30,418	0/0:10,0:10:30.09:0,30,397	1/1:1,17:17:48.11:684,48,0	0/0:9,0:9:27.08:0,27,354	0/0:7,0:7:21.06:0,21,274	0/0:12,0:12:33.11:0,33,458	0/0:7,0:7:18.04:0,18,233	0/0:14,0:14:36.09:0,36,474	0/0:8,0:8:18.05:0,18,235	0/0:6,0:6:15.04:0,15,193	0/0:14,0:14:42.12:0,42,550	1/1:1,18:19:16.19:738,16,0	1/1:1,11:12:30.10:448,30,0	1/1:0,4:4:6.02:90,6,0
chr10	1902951	.	C	CGGGGGG	622.71	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.546;DP=460;FS=0.000;HRun=1;HaplotypeScore=134.7929;InbreedingCoeff=0.8565;MQ=79.54;MQ0=1;MQRankSum=-4.208;QD=47.90;ReadPosRankSum=-0.514;VQSLOD=0.5142;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:81.12:0,81,1270	0/0:4,0:4:6.02:0,6,142	0/0:13,0:13:27.15:0,27,398	0/0:20,0:19:43.77:0,44,624	0/0:15,0:15:36.06:0,36,624	0/0:14,0:14:30.10:0,30,640	0/0:20,0:20:54.12:0,54,1043	0/0:16,0:16:42.11:0,42,731	1/1:8,5:13:30.41:717,30,0	0/0:22,0:21:53.96:0,54,951	0/0:11,0:10:12.02:0,12,208	0/0:10,0:10:26.97:0,27,576	0/0:14,0:14:33.08:0,33,684	0/0:15,0:15:33.10:0,33,712	0/0:11,0:11:21.06:0,21,429	0/0:13,0:13:24.07:0,24,496	0/0:16,0:16:33.01:0,33,703	0/0:17,0:17:45.95:0,46,938	0/0:14,0:14:29.97:0,30,528	0/0:9,0:9:15.02:0,15,262	0/0:38,0:37:81:0,81,1540	0/0:16,0:16:36.98:0,37,641	0/0:17,0:17:29.16:0,29,482	0/0:27,0:27:74.97:0,75,1261	0/0:14,0:14:27.08:0,27,535	0/0:11,0:11:29.89:0,30,306	0/0:15,0:15:23.92:0,24,297	0/0:15,0:15:36.07:0,36,536
chr10	1902954	.	G	GGC	907.46	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=3.480;DP=483;FS=3.616;HRun=0;HaplotypeScore=97.3761;InbreedingCoeff=0.9051;MQ=75.00;MQ0=1;MQRankSum=-1.969;QD=19.31;ReadPosRankSum=1.827;VQSLOD=3.9221;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:77.98:0,78,866	0/0:4,0:4:9.03:0,9,136	0/0:11,0:11:23.91:0,24,274	0/0:18,0:17:38.44:0,38,444	0/0:17,0:17:42.05:0,42,495	0/0:17,0:17:45.02:0,45,550	0/0:21,0:21:54.12:0,54,736	0/0:22,0:22:42.06:0,42,485	0/0:13,0:13:2.26:0,2,45	0/0:21,0:20:51.14:0,51,703	0/0:10,0:9:18.02:0,18,208	0/0:13,0:13:30.08:0,30,417	0/0:15,0:15:42.10:0,42,578	0/0:14,0:14:36.09:0,36,491	0/0:13,0:13:30.01:0,30,352	0/0:14,0:14:30.07:0,30,393	0/0:17,0:17:36.05:0,36,445	0/0:20,0:20:48.09:0,48,667	0/0:19,0:19:31.69:0,32,455	0/0:10,0:10:18.03:0,18,214	0/0:42,0:41:86.97:0,87,1136	0/0:16,0:16:32.82:0,33,424	0/0:15,0:15:29.87:0,30,355	0/0:24,0:24:66.13:0,66,897	0/0:17,0:17:43.28:0,43,506	1/1:2,9:11:23.94:268,24,0	1/1:4,11:16:17.83:238,18,0	1/1:5,13:20:33.06:542,33,0
chr10	1902961	.	G	GAGGA	689.76	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.992;DP=492;FS=0.000;HRun=0;HaplotypeScore=96.1104;InbreedingCoeff=0.9747;MQ=68.51;MQ0=1;MQRankSum=-5.269;QD=38.32;ReadPosRankSum=0.901;VQSLOD=3.8023;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:84.20:0,84,1432	0/0:5,0:5:15.05:0,15,281	0/0:10,0:10:27.05:0,27,415	0/0:19,0:17:34.52:0,35,490	0/0:17,0:17:48.14:0,48,762	0/0:15,0:15:45.11:0,45,832	0/0:24,0:24:69.20:0,69,1210	0/0:22,0:22:57.18:0,57,985	1/1:3,15:18:33.58:784,34,0	0/0:20,0:20:57.19:0,57,1080	0/0:11,0:10:27.07:0,27,431	0/0:14,0:14:42.14:0,42,781	0/0:17,0:17:48.16:0,48,939	0/0:13,0:13:35.74:0,36,722	0/0:17,0:17:48.13:0,48,800	0/0:14,0:14:39.12:0,39,715	0/0:21,0:21:47.99:0,48,811	0/0:23,0:23:63.14:0,63,1129	0/0:17,0:17:48.15:0,48,827	0/0:8,0:8:23.97:0,24,380	0/0:41,0:40:99:0,105,1962	0/0:16,0:16:45.14:0,45,795	0/0:15,0:15:28.33:0,28,526	0/0:25,0:25:72.21:0,72,1357	0/0:17,0:17:51.11:0,51,872	0/0:8,0:8:21.04:0,21,247	0/0:16,0:16:29.63:0,30,336	0/0:20,0:20:51.13:0,51,653
chr10	1906004	.	A	AGATT	1893.81	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-7.678;DP=610;FS=2.547;HRun=0;HaplotypeScore=94.9523;InbreedingCoeff=0.9487;MQ=71.06;MQ0=1;MQRankSum=1.051;QD=32.65;ReadPosRankSum=0.768;VQSLOD=3.7617;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:9,27:37:63.22:1508,63,0	0/0:10,0:10:18.06:0,18,288	0/0:20,0:19:8.99:0,9,116	0/0:17,0:15:15.05:0,15,238	0/0:23,0:23:33.07:0,33,497	0/0:20,0:20:42.14:0,42,669	0/0:18,0:18:42.11:0,42,621	0/0:33,0:33:48.16:0,48,749	0/0:10,0:29:48.05:0,48,447	0/0:39,0:39:93.29:0,93,1468	0/0:18,0:18:39.12:0,39,604	0/0:23,0:23:48.16:0,48,766	0/0:25,0:25:60.17:0,60,916	0/0:22,0:22:54.17:0,54,846	0/0:17,0:17:42.13:0,42,652	0/0:17,0:17:27.08:0,27,412	1/1:9,11:20:21.07:506,21,0	0/0:10,0:10:18.06:0,18,290	0/0:21,0:21:27.09:0,27,415	0/0:25,0:25:54.18:0,54,862	0/0:35,0:35:72.25:0,72,1157	0/0:20,0:20:42.14:0,42,675	0/0:14,0:14:30.10:0,30,483	0/0:22,0:22:54.18:0,54,869	0/0:16,0:16:24.07:0,24,364	0/0:21,0:21:54.17:0,54,845	0/0:25,0:25:39.13:0,39,627	0/0:12,0:12:21.07:0,21,338
chr10	1906265	.	CT	C	640.84	PASS	AB=0.877;AC=12;AF=0.214;AN=56;BaseQRankSum=1.939;DP=529;FS=4.395;HRun=14;HaplotypeScore=66.9760;InbreedingCoeff=-0.0594;MQ=75.76;MQ0=6;MQRankSum=0.657;QD=2.54;ReadPosRankSum=0.243;VQSLOD=-0.5661;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:13,24:38:83.54:373,0,84	0/0:3,0:4:8.85:0,9,70	0/1:34,1:15:5.64:6,0,66	0/1:31,2:20:3.65:4,0,30	0/0:27,2:29:13.25:0,13,409	0/0:14,1:15:15.28:0,15,267	0/1:16,1:17:10.09:10,0,178	0/1:14,9:23:16.77:173,0,17	0/1:5,0:14:0.47:0,0,58	0/0:19,0:20:47.86:0,48,421	0/0:11,3:14:1.69:0,2,150	0/0:15,0:16:32.07:0,32,300	0/0:9,0:9:0.54:0,1,144	0/0:11,1:12:3.11:0,3,139	0/0:10,0:11:5.32:0,5,136	0/0:16,0:16:33.03:0,33,302	1/1:3,14:21:26.87:161,27,0	0/0:18,2:21:24.29:0,24,350	0/1:18,2:23:5.07:5,0,209	0/0:16,0:16:32.91:0,33,293	0/1:6,1:10:2.89:3,0,95	0/0:10,2:13:18.48:0,18,164	0/1:15,1:16:9.36:9,0,189	0/1:15,2:17:31.01:31,0,285	0/0:15,0:15:8.99:0,9,190	0/0:22,0:22:30.03:0,30,275	0/0:28,0:29:12.22:0,12,334	0/0:15,0:15:27.54:0,28,277
chr10	1906726	.	G	GT	2150.67	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-1.470;DP=471;FS=0.000;HRun=9;HaplotypeScore=50.1955;InbreedingCoeff=0.9505;MQ=71.80;MQ0=2;MQRankSum=-1.230;QD=19.55;ReadPosRankSum=2.093;VQSLOD=3.6912;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,2:26:51.58:298,52,0	0/0:9,0:9:26.95:0,27,224	0/0:16,0:13:20.92:0,21,188	0/0:7,0:7:15.44:0,15,121	0/0:27,0:27:53.58:0,54,622	0/0:10,0:10:20.99:0,21,182	0/0:8,0:8:14.99:0,15,130	0/0:30,1:31:35.20:0,35,534	0/0:21,0:21:45.18:0,45,457	0/0:17,0:17:41.98:0,42,365	0/0:19,0:19:40.94:0,41,407	0/0:12,0:14:26.03:0,26,214	0/0:20,0:20:47.95:0,48,412	0/0:17,0:17:44.99:0,45,391	0/0:7,0:7:18:0,18,156	0/0:12,0:12:35.98:0,36,309	1/1:2,1:17:36.93:185,37,0	0/0:2,0:2:6:0,6,52	0/0:13,0:13:23.63:0,24,202	0/0:20,0:20:53.94:0,54,464	0/0:12,0:12:32.99:0,33,286	0/0:21,0:21:59.98:0,60,521	0/0:15,1:16:8.80:0,9,280	0/0:18,0:18:27.47:0,27,366	0/0:24,0:24:62.99:0,63,547	1/1:5,15:20:45.12:498,45,0	1/1:2,23:25:43.16:704,43,0	1/1:1,19:21:59.99:640,60,0
chr10	1917431	.	A	AT	140.15	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-2.264;DP=518;FS=0.000;HRun=9;HaplotypeScore=52.2882;InbreedingCoeff=0.8839;MQ=61.79;MQ0=5;MQRankSum=1.449;QD=12.74;ReadPosRankSum=0.561;VQSLOD=2.7601;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:24:53.64:0,54,464	0/0:5,0:5:11.97:0,12,99	0/0:12,0:7:20.65:0,21,153	0/0:13,0:9:20.99:0,21,181	0/0:35,0:35:99:0,102,880	0/0:18,0:18:47.97:0,48,414	0/0:17,0:17:29.96:0,30,258	0/0:27,0:26:62.97:0,63,541	1/1:3,8:11:21.06:232,21,0	0/0:29,0:29:68.95:0,69,597	0/0:28,0:29:77:0,77,657	0/0:9,0:9:23.99:0,24,208	0/0:13,0:13:38.97:0,39,334	0/0:16,0:16:47.98:0,48,414	0/0:13,0:13:35.98:0,36,313	0/0:23,0:23:50.96:0,51,440	0/0:29,0:29:77.91:0,78,663	0/0:19,0:19:44.97:0,45,388	0/0:19,0:14:35.97:0,36,313	0/0:35,0:35:92.92:0,93,795	0/0:8,0:8:17.98:0,18,156	0/0:12,0:12:29.99:0,30,260	0/0:27,0:27:77.82:0,78,662	0/0:6,0:6:9:0,9,78	0/0:20,0:20:56.98:0,57,493	0/0:24,0:24:65.97:0,66,573	0/0:16,0:16:44.99:0,45,391	0/0:8,0:8:14.99:0,15,130
chr10	1918285	.	G	GTT	461.53	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=2.493;DP=459;FS=14.040;HRun=10;HaplotypeScore=74.6161;InbreedingCoeff=0.6079;MQ=77.08;MQ0=0;MQRankSum=-1.410;QD=14.42;ReadPosRankSum=-3.516;VQSLOD=-0.1428;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:21:48.08:0,48,487	0/0:11,0:11:27.52:0,28,274	0/1:11,0:12:47.14:47,0,76	0/0:11,0:11:8.54:0,9,59	0/0:20,0:20:42.07:0,42,423	0/0:15,0:15:45.10:0,45,457	0/0:11,0:12:17.73:0,18,164	1/1:5,13:20:40.33:520,40,0	0/0:16,0:16:36.02:0,36,364	0/0:14,0:14:30.06:0,30,305	0/0:17,0:18:35.50:0,35,411	0/0:14,0:14:33.04:0,33,333	0/0:11,0:11:24.01:0,24,235	0/0:9,0:9:17.98:0,18,175	0/0:14,0:14:27.03:0,27,274	0/0:17,0:17:42.06:0,42,413	0/0:33,0:33:69.05:0,69,694	0/0:13,0:13:32.99:0,33,313	0/0:19,0:22:39.33:0,39,398	0/0:18,0:18:41.67:0,42,426	0/0:19,0:21:32.54:0,33,440	0/0:11,0:11:27.04:0,27,268	0/0:17,0:17:45.09:0,45,457	0/0:19,0:20:37.96:0,38,375	0/0:20,0:23:26.50:0,26,379	0/0:18,0:17:33.06:0,33,166	0/0:17,0:17:30.17:0,30,136	0/0:10,0:10:27.30:0,27,186
chr10	1918293	.	TTTA	T	1116.47	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=8.212;DP=436;FS=6.934;HRun=0;HaplotypeScore=74.7961;InbreedingCoeff=0.8374;MQ=70.38;MQ0=0;MQRankSum=0.508;QD=22.33;ReadPosRankSum=1.289;VQSLOD=2.7816;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:25:69.01:0,69,1081	0/0:12,0:12:27.08:0,27,504	0/1:8,0:8:2.28:2,0,167	0/0:8,0:8:2.82:0,3,107	0/0:19,0:19:42.04:0,42,708	0/0:18,0:18:54.17:0,54,1009	0/0:10,0:10:23.99:0,24,391	0/0:22,0:22:46.94:0,47,604	0/0:15,0:15:36.10:0,36,692	0/0:12,0:12:36.11:0,36,647	0/0:21,0:21:54.14:0,54,966	0/0:14,0:14:27.09:0,27,508	0/0:9,0:9:27.08:0,27,493	0/0:10,0:10:27.09:0,27,500	0/0:12,0:12:36.08:0,36,604	0/0:14,0:14:33.10:0,33,642	0/0:31,0:31:78.13:0,78,1415	0/0:15,0:15:42.07:0,42,689	0/0:18,0:18:51.10:0,51,799	0/0:18,0:18:45.13:0,45,850	0/0:19,0:19:54.17:0,54,1024	0/0:10,0:10:27.09:0,27,543	0/0:15,0:15:42.14:0,42,859	0/0:17,0:17:51.01:0,51,849	0/0:21,0:21:54.16:0,54,956	1/1:4,12:15:36.09:476,36,0	1/1:0,14:14:33.11:487,33,0	1/1:7,5:12:22.31:294,22,0
chr10	1918365	.	CGT	C	123.01	PASS	AB=0.933;AC=9;AF=0.173;AN=52;BaseQRankSum=2.767;DP=447;FS=1.088;HRun=0;HaplotypeScore=64.1564;InbreedingCoeff=-0.0732;MQ=65.23;MQ0=22;MQRankSum=2.096;QD=1.12;ReadPosRankSum=2.015;VQSLOD=1.3808;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:25:2.99:0,3,24	0/0:6,0:6:3.01:0,3,44	./.	./.	0/0:16,0:16:11.76:0,12,125	0/1:12,2:14:41.10:52,0,41	0/0:10,0:10:3.01:0,3,41	0/0:25,0:21:2.98:0,3,21	1/1:9,0:8:5.68:28,6,0	0/0:15,0:13:11.96:0,12,126	0/0:14,0:14:9.02:0,9,113	0/0:14,0:14:17.97:0,18,219	0/0:12,0:12:12.04:0,12,177	0/1:7,0:8:5.10:5,0,60	0/0:11,0:11:6.02:0,6,88	0/1:9,0:9:11.30:11,0,103	0/0:26,0:24:12.38:0,12,86	0/1:24,3:27:99:115,0,154	0/0:17,0:17:12.04:0,12,167	0/0:11,0:11:8.68:0,9,79	0/0:16,0:15:12.04:0,12,174	0/0:10,0:10:15.03:0,15,201	0/1:11,2:13:17.23:17,0,118	0/1:17,0:17:11.59:12,0,167	0/1:11,0:12:8.47:8,0,29	0/0:12,0:11:12.44:0,12,101	0/0:16,0:16:20.61:0,21,158	0/0:9,0:9:5.65:0,6,38
chr10	1919655	.	G	GA	2481.01	PASS	AB=0.944;AC=13;AF=0.232;AN=56;BaseQRankSum=-7.662;DP=664;FS=9.648;HRun=11;HaplotypeScore=76.3611;InbreedingCoeff=0.7294;MQ=71.98;MQ0=0;MQRankSum=-1.669;QD=13.41;ReadPosRankSum=-0.425;VQSLOD=2.8590;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:80.47:0,80,676	0/1:11,1:12:3.57:4,0,159	0/0:26,0:21:9.07:0,9,239	0/1:17,0:16:5.65:6,0,142	0/0:30,0:31:76.71:0,77,586	0/0:16,0:16:41.82:0,42,325	0/0:20,1:21:26.34:0,26,387	1/1:9,14:23:19.24:354,19,0	1/1:6,18:24:14.02:492,14,0	0/0:25,0:26:55.75:0,56,421	0/0:17,0:18:46.85:0,47,352	0/0:24,1:25:38.29:0,38,480	0/0:24,0:24:53.72:0,54,418	0/0:12,0:13:31.91:0,32,237	0/0:19,1:21:25.37:0,25,370	0/0:20,0:21:46.83:0,47,354	0/0:31,0:34:82.47:0,82,654	0/0:11,0:11:23.91:0,24,185	0/0:21,0:22:28.51:0,29,351	0/0:26,0:26:67.75:0,68,515	0/1:18,2:20:13.09:13,0,277	0/0:27,0:29:75.75:0,76,564	0/0:21,0:21:53.79:0,54,418	0/0:33,0:33:95.63:0,96,743	0/0:18,0:20:45.90:0,46,337	1/1:11,25:38:17.10:681,17,0	1/1:6,33:39:46.38:804,46,0	1/1:0,10:10:30.06:305,30,0
chr10	1920146	.	GACATCCATTCCC	G	2223.40	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.445;DP=549;FS=18.695;HRun=0;HaplotypeScore=189.3456;InbreedingCoeff=0.9888;MQ=90.22;MQ0=0;MQRankSum=-6.986;QD=52.94;ReadPosRankSum=1.608;VQSLOD=1.9970;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,17:25:42.14:1557,42,0	0/0:6,0:6:18.06:0,18,1109	0/0:22,0:22:57.20:0,57,3220	0/0:31,0:31:78.21:0,78,3767	0/0:20,0:20:57.20:0,57,3224	0/0:21,0:21:63.22:0,63,3279	0/0:20,0:20:57.19:0,57,2768	0/0:21,0:21:54.19:0,54,3078	0/0:21,0:21:63.22:0,63,3520	0/0:28,0:28:81.27:0,81,4765	0/0:13,0:13:39.13:0,39,2257	0/0:18,0:18:51.18:0,51,3008	0/0:11,0:11:33.11:0,33,1832	0/0:14,0:14:39.13:0,39,2133	0/0:9,0:9:27.09:0,27,1662	0/0:17,0:17:51.18:0,51,3036	1/1:6,11:17:21.07:787,21,0	0/0:14,0:14:39.13:0,39,2192	0/0:29,0:29:81.28:0,81,4662	0/0:15,0:15:45.15:0,45,2516	0/0:37,0:37:99:0,105,6037	0/0:15,0:15:45.15:0,45,2669	0/0:13,0:13:33.11:0,33,1917	0/0:27,0:27:81.28:0,81,4718	0/0:35,0:35:99:0,100,5841	0/0:18,0:18:51.17:0,51,2961	0/0:26,0:26:75.26:0,75,4165	0/0:6,0:6:18.06:0,18,1109
chr10	1920335	.	A	ATGGGTTCTAGAGTCTCTTTGTGGTA	45337.27	PASS	AB=0.865;AC=53;AF=0.946;AN=56;BaseQRankSum=-3.773;DP=299;FS=17.066;HRun=0;HaplotypeScore=307.1478;InbreedingCoeff=-0.0685;MQ=69.64;MQ0=0;MQRankSum=-2.107;QD=151.63;ReadPosRankSum=2.709;VQSLOD=3.6047;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:13:36.12:2728,36,0	1/1:6,0:6:18.06:1299,18,0	0/1:5,1:7:21.10:1161,0,21	0/1:11,0:8:84.47:1283,0,84	1/1:10,0:10:15.48:1053,15,0	1/1:10,0:10:26.49:2025,26,0	1/1:8,0:8:18.06:879,18,0	1/1:15,0:15:45.15:2993,45,0	1/1:15,0:15:29.17:2403,29,0	1/1:13,0:13:17.34:1545,17,0	1/1:5,0:5:12.04:729,12,0	0/1:12,0:12:1.86:1741,0,2	1/1:16,0:16:42.09:2718,42,0	1/1:18,0:18:52.80:2533,53,0	1/1:8,0:8:17.23:947,17,0	1/1:8,0:8:24.08:1972,24,0	1/1:10,0:10:14.19:445,14,0	1/1:4,0:4:9.03:632,9,0	1/1:7,0:7:14.91:810,15,0	1/1:12,0:11:19.43:1697,19,0	1/1:10,0:10:15.05:1155,15,0	1/1:11,0:11:21.07:1471,21,0	1/1:10,0:10:30.10:2103,30,0	1/1:9,0:9:5.01:685,5,0	1/1:21,0:21:40.47:2785,40,0	1/1:6,0:5:15.05:1514,15,0	1/1:18,0:18:54.19:3977,54,0	1/1:3,0:3:3.01:55,3,0
chr10	1922055	.	AG	A	6722.22	PASS	AB=0.843;AC=53;AF=0.946;AN=56;BaseQRankSum=6.133;DP=586;FS=0.906;HRun=1;HaplotypeScore=120.2922;InbreedingCoeff=-0.0587;MQ=81.17;MQ0=0;MQRankSum=-1.957;QD=11.47;ReadPosRankSum=6.977;VQSLOD=3.0056;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:48,0:48:72.79:533,73,0	1/1:7,0:7:20.07:105,20,0	0/1:13,7:20:43.61:167,0,44	0/1:11,4:14:46.51:73,0,47	1/1:30,0:30:37.24:363,37,0	1/1:21,0:21:56.97:284,57,0	1/1:29,0:29:73.64:362,74,0	1/1:22,0:22:55.95:250,56,0	1/1:26,0:26:59.89:301,60,0	1/1:17,0:17:41.20:162,41,0	1/1:15,0:15:42.65:211,43,0	1/1:22,0:22:53.89:263,54,0	1/1:17,0:17:45.62:231,46,0	1/1:14,0:14:37.29:198,37,0	1/1:10,0:10:4.73:109,5,0	1/1:22,0:22:56.79:279,57,0	1/1:29,0:29:29.73:308,30,0	0/1:15,0:15:5.91:125,0,6	1/1:23,0:23:61.77:262,62,0	1/1:27,0:27:62.83:320,63,0	1/1:26,0:26:59.61:292,60,0	1/1:20,0:20:51.46:272,51,0	1/1:18,0:18:27.61:223,28,0	1/1:18,0:18:13.26:148,13,0	1/1:17,0:17:39.73:199,40,0	1/1:26,0:26:42.95:262,43,0	1/1:21,0:21:33.38:253,33,0	1/1:11,0:11:31.64:166,32,0
chr10	1925672	.	CTG	C	74.40	PASS	AB=0.945;AC=11;AF=0.275;AN=40;BaseQRankSum=-1.422;DP=567;FS=9.100;HRun=0;HaplotypeScore=73.1054;InbreedingCoeff=0.0291;MQ=67.76;MQ0=21;MQRankSum=0.284;QD=0.32;ReadPosRankSum=-0.447;VQSLOD=0.4704;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:12.02:0,12,151	0/0:10,0:10:2.22:0,2,7	./.	./.	0/0:12,0:12:2.80:0,3,13	./.	0/1:23,0:23:17.25:17,0,18	./.	0/1:20,0:24:0.11:0,0,0	0/0:17,0:15:8.79:0,9,62	0/0:11,0:11:0:0,0,0	0/0:16,0:16:2.55:0,3,43	0/0:16,0:16:8.97:0,9,76	0/1:17,0:17:6.93:7,0,17	0/1:11,0:11:25.17:25,0,37	0/0:20,0:19:3.01:0,3,43	1/1:29,0:28:6.28:37,6,0	0/1:18,5:22:18.30:23,0,18	0/0:16,0:15:5.74:0,6,31	0/0:11,0:11:5.98:0,6,47	0/1:58,0:58:30.92:31,0,45	0/0:12,0:11:12.01:0,12,149	./.	0/1:28,0:29:5.47:5,0,26	1/1:14,0:14:5.84:45,6,0	./.	./.	./.
chr10	1925862	.	G	GA	208.59	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-1.589;DP=488;FS=0.000;HRun=6;HaplotypeScore=46.3401;InbreedingCoeff=0.9709;MQ=77.20;MQ0=0;MQRankSum=-0.901;QD=16.05;ReadPosRankSum=0.159;VQSLOD=2.6924;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:87.20:0,87,888	0/0:7,0:7:18.04:0,18,184	0/0:20,0:21:42.07:0,42,418	0/0:15,0:15:32.75:0,33,299	0/0:27,0:27:78.18:0,78,796	0/0:7,0:7:21.02:0,21,206	0/0:18,0:18:48.11:0,48,489	0/0:14,0:14:39.09:0,39,398	1/1:1,12:13:24.08:302,24,0	0/0:23,0:23:63.13:0,63,637	0/0:18,0:18:51.11:0,51,519	0/0:11,0:11:30.07:0,30,305	0/0:7,0:7:21.05:0,21,214	0/0:11,0:11:30.07:0,30,306	0/0:13,0:13:36.08:0,36,367	0/0:8,0:8:24.05:0,24,245	0/0:17,0:17:45.10:0,45,459	0/0:20,0:20:54.12:0,54,551	0/0:20,0:20:42.09:0,42,429	0/0:31,0:31:90.16:0,90,898	0/0:6,0:6:18.04:0,18,184	0/0:21,0:21:60.13:0,60,612	0/0:22,0:22:51.10:0,51,517	0/0:16,0:16:48.11:0,48,490	0/0:26,0:25:60.13:0,60,612	0/0:23,0:23:66.15:0,66,673	0/0:27,0:27:66.14:0,66,673	0/0:16,0:16:48.05:0,48,472
chr10	1930643	.	A	AG	4410.17	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-11.238;DP=632;FS=12.614;HRun=0;HaplotypeScore=61.5696;InbreedingCoeff=0.9997;MQ=84.40;MQ0=0;MQRankSum=-0.425;QD=44.55;ReadPosRankSum=-0.182;VQSLOD=3.8156;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,151,2096	0/0:10,0:10:30.10:0,30,407	0/0:23,0:24:69.19:0,69,915	0/0:15,0:15:34.94:0,35,493	0/0:26,0:26:78.20:0,78,1034	0/0:20,0:19:60.20:0,60,838	0/0:22,0:22:63.19:0,63,861	1/1:1,19:20:57.19:912,57,0	1/1:0,15:15:39.13:624,39,0	0/0:28,0:28:84.28:0,84,1175	0/0:22,0:22:60.20:0,60,836	0/0:20,0:20:60.19:0,60,822	0/0:13,0:13:39.13:0,39,545	0/0:22,0:22:66.22:0,66,921	0/0:18,0:18:51.17:0,51,713	0/0:17,0:17:51.15:0,51,695	0/0:29,0:29:84.26:0,84,1156	0/0:25,0:25:75.25:0,75,1048	0/0:22,0:22:66.22:0,66,922	0/0:28,0:28:84.28:0,84,1175	0/0:31,0:31:90.26:0,90,1235	0/0:24,0:24:72.21:0,72,971	0/0:17,0:17:48.16:0,48,670	0/0:27,0:27:72.20:0,72,970	0/0:19,0:19:57.19:0,57,797	1/1:0,22:22:66.18:1005,66,0	1/1:1,31:32:87.17:1390,87,0	1/1:0,10:10:30.10:480,30,0
chr10	1931584	.	AT	A	2826.88	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.394;DP=698;FS=0.950;HRun=1;HaplotypeScore=66.5522;InbreedingCoeff=0.9943;MQ=86.79;MQ0=0;MQRankSum=-1.995;QD=36.71;ReadPosRankSum=3.024;VQSLOD=4.0655;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,163,2555	0/0:13,0:13:39.11:0,39,590	0/0:24,0:24:71.77:0,72,1062	0/0:32,0:32:89.32:0,89,1326	0/0:31,0:31:90.29:0,90,1410	0/0:27,0:27:81.26:0,81,1271	0/0:16,0:16:48.15:0,48,744	0/0:23,0:23:69.22:0,69,1063	0/0:25,0:25:72.25:0,72,1150	0/0:26,0:26:72.25:0,72,1148	0/0:31,0:31:93.29:0,93,1432	0/0:18,0:18:54.16:0,54,833	0/0:17,0:17:51.16:0,51,792	0/0:17,0:17:51.17:0,51,812	0/0:20,0:20:60.18:0,60,934	0/0:22,0:22:66.23:0,66,1054	0/0:22,0:22:66.22:0,66,1051	0/0:5,0:5:15.05:0,15,239	0/0:28,0:28:81.26:0,81,1251	0/0:29,0:29:87.28:0,87,1364	0/0:39,0:39:99:0,117,1869	0/0:29,0:29:84.27:0,84,1317	0/0:27,0:27:75.21:0,75,1126	0/0:31,0:30:90.29:0,90,1407	0/0:15,0:15:45.15:0,45,718	1/1:1,28:29:39.32:1125,39,0	1/1:0,32:32:87.29:1216,87,0	1/1:0,16:16:45.15:629,45,0
chr10	1935299	.	G	GC	162.75	PASS	AB=0.719;AC=3;AF=0.071;AN=42;BaseQRankSum=2.460;DP=1030;FS=2.313;HRun=2;HaplotypeScore=25.9452;InbreedingCoeff=0.2595;MQ=14.39;MQ0=517;MQRankSum=-0.537;QD=2.26;ReadPosRankSum=2.014;VQSLOD=-0.7429;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:103,0:7:9.03:0,9,111	0/0:7,0:2:3.01:0,3,37	./.	./.	0/0:40,0:11:3.01:0,3,37	0/0:32,0:13:18.06:0,18,222	./.	./.	0/0:37,0:9:18.06:0,18,222	0/0:33,0:8:18.04:0,18,208	0/0:35,0:6:9.03:0,9,111	0/0:26,0:12:24.08:0,24,296	0/0:26,0:8:9.03:0,9,110	0/0:38,0:12:24.08:0,24,295	0/0:51,0:18:27.08:0,27,333	0/0:24,0:12:18.06:0,18,222	./.	0/0:75,0:7:8.82:0,9,111	./.	0/0:47,0:11:6.02:0,6,74	0/0:29,0:8:6.02:0,6,73	0/0:32,0:6:3.01:0,3,37	0/0:41,0:10:3.01:0,3,37	0/0:70,0:11:6.02:0,6,74	0/0:31,0:10:15.05:0,15,185	1/1:14,16:7:15.04:175,15,0	0/1:25,16:14:37.19:84,0,37	./.
chr10	1935302	.	TCAA	T	288.32	PASS	AC=4;AF=0.095;AN=42;BaseQRankSum=2.273;DP=1035;FS=0.000;HRun=0;HaplotypeScore=30.9422;InbreedingCoeff=0.5284;MQ=14.79;MQ0=507;MQRankSum=-1.602;QD=4.18;ReadPosRankSum=2.007;VQSLOD=1.1026;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:102,0:7:3.01:0,3,69	0/0:8,0:3:3.01:0,3,69	./.	./.	0/0:38,0:12:6.02:0,6,108	0/0:31,0:12:9.03:0,9,207	./.	./.	0/0:40,0:11:15.05:0,15,345	0/0:36,0:10:24.08:0,24,531	0/0:36,0:7:12.04:0,12,245	0/0:24,0:12:21.07:0,21,483	0/0:28,0:8:6.02:0,6,138	0/0:38,0:12:24.08:0,24,538	0/0:51,0:18:24.08:0,24,552	0/0:24,0:12:18.06:0,18,387	./.	0/0:78,0:7:8.99:0,9,207	./.	0/0:48,0:12:6.02:0,6,138	0/0:31,0:8:6.02:0,6,138	0/0:34,0:8:9.03:0,9,151	0/0:41,0:10:3.01:0,3,69	0/0:70,0:11:6.02:0,6,138	0/0:31,0:10:15.05:0,15,345	1/1:13,19:7:18.06:257,18,0	1/1:21,16:14:12.03:140,12,0	./.
chr10	1936193	.	T	TA	139.04	PASS	AC=2;AF=0.048;AN=42;BaseQRankSum=-2.756;DP=1361;FS=0.000;HRun=1;HaplotypeScore=23.2150;InbreedingCoeff=0.3119;MQ=10.52;MQ0=1091;MQRankSum=0.704;QD=10.70;ReadPosRankSum=-2.342;VQSLOD=0.3685;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:68,0:8:3.01:0,3,42	0/0:35,0:2:3.01:0,3,42	./.	./.	./.	0/0:38,0:13:24.08:0,24,335	0/0:19,0:5:15.05:0,15,205	1/1:7,6:7:17.97:226,18,0	0/0:24,0:8:15.05:0,15,209	0/0:52,0:11:27.09:0,27,371	./.	0/0:19,0:5:9.03:0,9,126	0/0:25,0:8:18.06:0,18,251	0/0:28,0:6:9.02:0,9,126	0/0:37,0:14:36.12:0,36,499	0/0:31,0:7:12.04:0,12,167	0/0:42,0:4:6.02:0,6,84	0/0:35,0:5:3.01:0,3,42	0/0:34,0:4:12.04:0,12,167	./.	0/0:41,0:4:3.01:0,3,36	0/0:54,0:4:3.01:0,3,42	./.	0/0:42,0:3:3.01:0,3,42	0/0:69,0:1:3.01:0,3,42	0/0:28,0:6:12.04:0,12,167	0/0:49,0:18:30.10:0,30,418	./.
chr10	1940211	.	A	AAGGACCTGTCCCAAGG	653.95	PASS	AB=0.778;AC=3;AF=0.75;AN=4;BaseQRankSum=0.825;DP=12;FS=0.000;HRun=0;HaplotypeScore=79.2176;MQ=243.56;MQ0=0;MQRankSum=-0.825;QD=59.45;ReadPosRankSum=1.768;VQSLOD=2.8254;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	1/1:1,1:4:7.42:446,7,0	0/1:5,0:7:17.88:274,0,18	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.
chr10	1942258	.	A	ACT	37.97	PASS	AB=1.000;AC=7;AF=0.206;AN=34;BaseQRankSum=1.371;DP=45;FS=17.363;HRun=0;HaplotypeScore=20.8682;InbreedingCoeff=0.3169;MQ=101.31;MQ0=0;MQRankSum=-0.482;QD=5.42;ReadPosRankSum=1.520;VQSLOD=0.7605;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:3,0:3:2.97:0,3,20	0/0:2,0:2:5.99:0,6,51	0/0:7,0:6:6.07:0,6,51	0/1:3,0:2:0:0,0,0	./.	./.	0/0:4,0:4:9:0,9,77	1/1:1,1:2:2.47:56,2,0	0/0:2,0:2:2.97:0,3,20	./.	./.	0/0:1,0:1:3:0,3,26	./.	0/0:1,0:1:2.97:0,3,20	0/0:1,0:1:2.97:0,3,20	./.	./.	./.	./.	1/1:0,1:1:2.92:17,3,0	0/0:5,1:6:9:0,9,78	0/0:1,0:1:2.96:0,3,19	./.	0/0:2,0:2:0:0,0,0	./.	1/1:0,1:1:3.01:58,3,0	0/0:2,0:2:3.01:0,3,44	0/0:2,0:2:6:0,6,53
chr10	1942282	.	A	AC	278.97	PASS	AB=1.000;AC=27;AF=0.900;AN=30;BaseQRankSum=-0.551;DP=54;FS=0.000;HRun=4;HaplotypeScore=24.1374;InbreedingCoeff=0.1977;MQ=76.22;MQ0=1;MQRankSum=-1.953;QD=6.97;ReadPosRankSum=-0.851;VQSLOD=-0.2959;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,0:2:0.47:1,0,0	./.	1/1:2,1:2:3.01:45,3,0	0/1:5,0:3:10.92:11,0,13	./.	./.	1/1:7,0:7:0.47:2,0,0	1/1:6,1:7:13.89:89,14,0	./.	1/1:1,0:1:1.25:3,1,0	./.	./.	1/1:1,0:1:0.47:1,0,0	1/1:0,2:2:3.01:35,3,0	./.	./.	./.	1/1:3,0:3:5.81:53,6,0	1/1:1,0:1:2.04:6,2,0	./.	./.	1/1:0,1:1:3.01:30,3,0	1/1:2,0:2:5.93:51,6,0	./.	1/1:3,0:3:1.16:4,1,0	1/1:2,0:2:5.83:33,6,0	0/0:2,0:2:0.36:0,0,17	./.
chr10	1944732	.	ATG	A	209.39	PASS	AB=0.927;AC=10;AF=0.192;AN=52;BaseQRankSum=5.026;DP=592;FS=1.832;HRun=0;HaplotypeScore=83.9651;InbreedingCoeff=-0.0395;MQ=59.76;MQ0=19;MQRankSum=0.635;QD=0.98;ReadPosRankSum=1.252;VQSLOD=1.4906;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:20,6:25:11.93:125,12,0	0/0:7,0:7:2.97:0,3,20	./.	./.	0/0:19,2:19:8.86:0,9,99	0/0:12,0:12:18.39:0,18,172	0/0:29,0:29:29.95:0,30,378	0/0:27,0:24:7.84:0,8,36	0/1:18,0:18:44.50:91,0,44	0/1:28,0:26:24.76:25,0,105	0/0:20,0:18:15.02:0,15,168	0/0:18,0:18:15.05:0,15,215	0/0:16,1:16:15.03:0,15,191	0/0:18,0:18:10.77:0,11,250	0/1:18,1:18:11.67:12,0,212	0/0:18,0:18:24.05:0,24,310	0/1:31,2:34:48.95:49,0,111	0/0:17,0:17:23.97:0,24,273	0/0:22,0:21:11.89:0,12,104	0/0:17,0:17:9.03:0,9,130	0/1:41,0:39:5.79:6,0,221	0/0:21,0:20:18.02:0,18,217	0/1:10,3:13:11.78:12,0,198	0/1:15,0:15:11.25:11,0,212	0/0:21,0:20:24.01:0,24,291	0/1:12,7:18:17.57:18,0,52	0/0:22,0:18:3.27:0,3,14	0/0:18,0:17:13:0,13,55
chr10	1944772	.	G	GTA	975.18	PASS	AB=0.927;AC=9;AF=0.173;AN=52;BaseQRankSum=1.662;DP=563;FS=3.557;HRun=0;HaplotypeScore=83.2265;InbreedingCoeff=0.2963;MQ=49.58;MQ0=27;MQRankSum=0.947;QD=6.82;ReadPosRankSum=1.862;VQSLOD=3.2039;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:28,1:28:38.71:330,39,0	0/1:10,0:8:1:1,0,39	./.	./.	0/0:22,0:21:31.86:0,32,275	0/0:14,0:14:24.21:0,24,223	0/0:23,0:22:47.58:0,48,526	0/0:29,0:22:11.40:0,11,70	0/1:22,0:21:64.59:65,0,209	0/0:32,0:28:1.73:0,2,302	0/0:20,0:17:26.86:0,27,264	0/1:19,0:18:99:131,0,174	0/0:18,0:17:44.95:0,45,434	0/0:15,0:15:19.77:0,20,329	0/0:20,0:18:11.90:0,12,374	0/0:22,0:22:47.92:0,48,502	0/0:33,0:32:8.59:0,9,306	0/0:16,0:15:5.97:0,6,328	0/0:14,0:13:20.83:0,21,180	0/0:21,0:19:29.98:0,30,300	0/0:31,0:28:44.51:0,45,410	0/0:19,1:19:38.98:0,39,387	0/0:21,0:21:12:0,12,365	0/0:19,0:19:6.53:0,7,344	0/0:26,0:24:50.98:0,51,522	0/1:27,0:26:29.07:367,0,29	1/1:5,17:18:2.96:58,3,0	0/1:6,8:12:1.24:158,0,1
chr10	1944926	.	C	CTGAA	2270.70	PASS	AB=0.815;AC=13;AF=0.232;AN=56;BaseQRankSum=3.807;DP=539;FS=4.830;HRun=0;HaplotypeScore=94.8490;InbreedingCoeff=0.8362;MQ=71.88;MQ0=0;MQRankSum=-6.500;QD=15.14;ReadPosRankSum=-2.811;VQSLOD=2.4439;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,0:16:12.04:204,12,0	0/0:10,0:10:21.07:0,21,336	0/0:20,0:15:3.01:0,3,43	0/0:18,0:17:17.72:0,18,226	0/0:26,0:26:57.19:0,57,907	0/0:23,0:23:54.18:0,54,861	0/0:20,0:20:30.07:0,30,431	1/1:41,0:32:15.03:218,15,0	1/1:11,13:25:24.08:575,24,0	0/0:34,0:34:60.20:0,60,959	0/0:14,0:14:30.10:0,30,482	0/0:14,0:14:21.06:0,21,314	0/0:20,0:20:39.10:0,39,598	0/0:22,0:22:30.09:0,30,458	0/0:18,0:18:36.11:0,36,536	0/0:17,0:17:27.09:0,27,434	1/1:2,6:8:12.04:289,12,0	0/0:10,0:10:24.08:0,24,382	0/0:11,0:11:24.07:0,24,364	0/0:21,0:21:42.13:0,42,651	0/0:21,0:21:36.12:0,36,577	0/0:13,0:13:27.09:0,27,433	0/0:20,0:20:33.11:0,33,528	0/0:18,0:18:36.08:0,36,550	0/0:17,0:17:36.12:0,36,573	0/1:17,0:21:65.46:396,0,65	1/1:27,0:25:39.11:606,39,0	1/1:6,0:10:9.03:166,9,0
chr10	1947395	.	TC	T	5920.99	PASS	AC=52;AF=0.963;AN=54;BaseQRankSum=4.935;DP=436;FS=3.540;HRun=1;HaplotypeScore=65.0136;InbreedingCoeff=0.4819;MQ=40.46;MQ0=18;MQRankSum=-2.827;QD=13.90;ReadPosRankSum=5.305;VQSLOD=4.2924;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:9:1.83:151,2,0	1/1:6,0:6:14.89:110,15,0	0/0:4,0:1:3:0,3,27	./.	1/1:26,0:24:34.37:394,34,0	1/1:20,0:14:30.67:225,31,0	1/1:8,0:8:17.96:143,18,0	1/1:11,0:7:20.84:147,21,0	1/1:17,0:14:16.73:265,17,0	1/1:25,0:16:38.58:247,39,0	1/1:27,0:26:60.64:451,61,0	1/1:19,0:16:41.66:310,42,0	1/1:20,0:20:56.33:397,56,0	1/1:9,0:8:20.97:172,21,0	1/1:21,0:20:23.55:310,24,0	1/1:12,0:9:14.90:113,15,0	1/1:13,0:13:32.64:234,33,0	1/1:16,0:15:29.55:199,30,0	1/1:9,0:5:10.90:65,11,0	1/1:2,30:31:10.82:195,11,0	1/1:8,0:8:17.11:116,17,0	1/1:23,0:21:49.04:382,49,0	1/1:18,0:17:31.06:234,31,0	1/1:14,0:12:26.75:195,27,0	1/1:20,0:19:38.57:279,39,0	1/1:20,0:18:25.27:311,25,0	1/1:19,0:14:11.86:232,12,0	1/1:2,0:2:5.94:42,6,0
chr10	1947650	.	AC	A	4684.92	PASS	AB=0.753;AC=51;AF=0.911;AN=56;BaseQRankSum=-0.313;DP=363;FS=8.627;HRun=2;HaplotypeScore=57.3545;InbreedingCoeff=-0.1057;MQ=44.62;MQ0=14;MQRankSum=3.209;QD=12.91;ReadPosRankSum=4.815;VQSLOD=3.1462;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,15:18:22.15:185,22,0	1/1:0,5:5:14.78:96,15,0	0/1:9,0:3:15.51:16,0,32	0/1:8,0:7:36.81:87,0,37	1/1:0,13:13:23.84:177,24,0	1/1:3,12:14:18.54:231,19,0	0/1:2,7:9:20.30:82,0,20	0/1:4,15:16:21.91:223,0,22	1/1:0,13:13:29.73:214,30,0	1/1:0,8:5:11.90:84,12,0	1/1:1,17:18:44.06:305,44,0	1/1:1,7:7:11.28:82,11,0	1/1:2,16:15:14.08:214,14,0	1/1:1,8:9:10.68:82,11,0	1/1:1,17:16:33.97:218,34,0	1/1:2,11:11:26.51:178,27,0	1/1:5,13:13:3.75:123,4,0	0/1:4,5:7:12.20:74,0,12	1/1:1,14:14:38.56:234,39,0	1/1:0,24:24:55.07:369,55,0	1/1:3,5:6:11.55:62,12,0	1/1:0,6:6:14.84:107,15,0	1/1:1,12:13:25.96:182,26,0	1/1:0,9:8:20.61:136,21,0	1/1:0,11:11:29.49:196,29,0	1/1:1,20:19:55.59:342,56,0	1/1:0,22:21:46.98:350,47,0	1/1:0,3:3:7.07:36,7,0
chr10	1948810	.	C	CAA	5314.64	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-11.475;DP=480;FS=0.423;HRun=1;HaplotypeScore=58.4770;InbreedingCoeff=0.9751;MQ=61.09;MQ0=3;MQRankSum=-2.584;QD=44.66;ReadPosRankSum=0.120;VQSLOD=4.7041;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:54.17:0,54,796	0/0:8,0:7:21.03:0,21,295	0/0:13,0:11:15.42:0,15,346	0/0:13,0:12:33.08:0,33,442	0/0:18,0:18:45.15:0,45,688	0/0:19,0:19:54.18:0,54,824	0/0:13,0:13:9.96:0,10,476	1/1:3,21:22:60.16:1073,60,0	1/1:2,14:16:42.14:811,42,0	0/0:21,0:21:60.19:0,60,898	0/0:19,0:19:45.11:0,45,655	0/0:11,0:11:30.10:0,30,458	0/0:21,0:21:57.19:0,57,873	0/0:8,0:8:24.07:0,24,346	0/0:18,0:18:54.18:0,54,827	0/0:10,0:10:27.09:0,27,413	0/0:17,0:17:45.12:0,45,665	0/0:27,0:26:59.94:0,60,1087	0/0:18,0:18:48.16:0,48,717	0/0:20,0:20:54.18:0,54,819	0/0:12,0:12:36.11:0,36,530	0/0:13,0:13:39.13:0,39,596	0/0:14,0:14:39.12:0,39,575	0/0:16,0:16:48.16:0,48,731	0/0:13,0:12:36.11:0,36,530	1/1:1,18:19:11.24:998,11,0	1/1:0,35:34:84.29:1622,84,0	1/1:2,22:25:42.14:811,42,0
chr10	1953041	.	AT	A	2739.62	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=12.675;DP=560;FS=6.413;HRun=8;HaplotypeScore=59.0275;InbreedingCoeff=0.9963;MQ=75.76;MQ0=0;MQRankSum=-1.630;QD=24.91;ReadPosRankSum=-1.251;VQSLOD=3.9977;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:36.11:0,36,435	0/0:10,0:10:27.08:0,27,326	0/0:15,0:16:32.36:0,32,391	0/0:17,0:17:26.62:0,27,435	0/0:17,0:17:48.15:0,48,580	0/0:35,0:35:90.28:0,90,1087	0/0:6,0:6:18.05:0,18,208	1/1:3,30:33:90.11:858,90,0	1/1:1,23:24:66.11:637,66,0	0/0:27,0:27:75.22:0,75,897	0/0:27,0:27:78.24:0,78,942	0/0:22,0:22:60.18:0,60,725	0/0:20,0:20:60.17:0,60,712	0/0:15,0:15:39.12:0,39,471	0/0:18,0:18:51.16:0,51,616	0/0:18,0:18:54.17:0,54,652	0/0:20,0:20:54.12:0,54,625	0/0:23,0:23:66.17:0,66,780	0/0:14,0:14:42.12:0,42,497	0/0:29,0:29:75.18:0,75,877	0/0:19,0:19:57.17:0,57,689	0/0:32,0:32:84.03:0,84,980	0/0:24,0:24:69.21:0,69,834	0/0:9,0:9:27.08:0,27,326	0/0:20,0:20:60.18:0,60,725	1/1:1,20:21:60.10:579,60,0	1/1:2,23:25:66.11:637,66,0	1/1:0,7:7:21.03:203,21,0
chr10	1955449	.	C	CCAT	7215.01	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-11.832;DP=643;FS=1.723;HRun=0;HaplotypeScore=88.7584;InbreedingCoeff=0.9962;MQ=80.48;MQ0=0;MQRankSum=-2.664;QD=58.66;ReadPosRankSum=0.743;VQSLOD=6.7735;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,108,1791	0/0:15,0:15:45.15:0,45,750	0/0:34,0:34:96.26:0,96,1507	0/0:19,0:19:39.17:0,39,777	0/0:20,0:20:48.16:0,48,796	0/0:21,0:21:48.07:0,48,713	0/0:33,0:33:90.29:0,90,1470	1/1:9,16:26:66.21:1375,66,0	1/1:1,26:27:75.26:1665,75,0	0/0:26,0:26:78.26:0,78,1263	0/0:17,0:17:48.16:0,48,780	0/0:24,0:24:69.24:0,69,1136	0/0:17,0:17:45.14:0,45,725	0/0:21,0:21:54.17:0,54,870	0/0:35,0:35:99:0,99,1622	0/0:18,0:18:45.15:0,45,750	0/0:27,0:27:78.25:0,78,1268	0/0:13,0:13:39.13:0,39,650	0/0:19,0:19:54.18:0,54,891	0/0:21,0:21:60.18:0,60,934	0/0:25,0:25:72.23:0,72,1157	0/0:23,0:23:69.23:0,69,1125	0/0:15,0:15:45.14:0,45,725	0/0:19,0:18:54.18:0,54,895	0/0:22,0:22:60.21:0,60,999	1/1:3,33:37:99:2408,108,0	1/1:1,25:26:63.16:1427,63,0	1/1:2,5:7:15.05:340,15,0
chr10	1957360	.	A	AAC	2644.42	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=5.234;DP=760;FS=6.623;HRun=0;HaplotypeScore=124.8994;InbreedingCoeff=0.9828;MQ=51.19;MQ0=19;MQRankSum=-11.061;QD=18.89;ReadPosRankSum=-3.264;VQSLOD=2.8721;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:14,6:19:9.40:107,9,0	0/0:11,0:10:24.06:0,24,287	0/0:60,0:18:45.11:0,45,563	0/0:47,0:17:22.41:0,22,409	0/0:25,0:25:69.18:0,69,853	0/0:18,0:18:45.10:0,45,549	0/0:27,0:26:60.16:0,60,751	1/1:8,12:20:15.34:533,15,0	1/1:9,16:25:39.03:489,39,0	0/0:26,0:26:75.19:0,75,925	0/0:20,0:20:48.15:0,48,612	0/0:22,0:22:58.12:0,58,759	0/0:17,0:17:45.11:0,45,552	0/0:30,0:30:81.12:0,81,1014	0/0:27,0:27:72.22:0,72,911	0/0:25,0:25:72.21:0,72,907	1/1:17,7:23:18.04:327,18,0	0/0:28,0:28:71.22:0,71,869	0/0:23,0:22:48.13:0,48,596	0/0:32,0:32:75.19:0,75,928	0/0:71,0:70:99:0,180,2345	0/0:26,0:25:65.87:0,66,808	0/0:26,0:26:75.21:0,75,926	0/0:29,0:27:63.17:0,63,789	0/0:30,0:30:75.21:0,75,946	1/1:9,16:25:62.84:878,63,0	1/1:12,4:16:21.41:251,21,0	1/1:2,6:8:18.04:253,18,0
chr10	1957732	.	A	AAT	6826.49	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-13.902;DP=602;FS=0.000;HRun=0;HaplotypeScore=64.4538;InbreedingCoeff=0.9979;MQ=78.20;MQ0=1;MQRankSum=-2.125;QD=44.91;ReadPosRankSum=-0.716;VQSLOD=5.9970;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,28:28:78.27:1384,78,0	0/0:9,0:9:27.09:0,27,371	0/0:18,0:18:48.15:0,48,633	0/0:14,0:14:25.41:0,25,406	0/0:39,0:39:99:0,108,1446	0/0:15,0:15:42.13:0,42,563	0/0:13,0:13:36.12:0,36,495	1/1:2,28:30:84.27:1450,84,0	1/1:0,14:15:30.10:515,30,0	0/0:21,0:21:63.20:0,63,853	0/0:30,0:30:78.25:0,78,1056	0/0:16,0:16:42.14:0,42,577	0/0:26,0:26:66.20:0,66,889	0/0:21,0:21:60.19:0,60,809	0/0:28,0:28:75.24:0,75,1014	0/0:14,0:14:42.13:0,42,564	1/1:0,9:10:24.08:426,24,0	0/0:23,0:23:69.19:0,69,925	0/0:18,0:18:51.14:0,51,669	0/0:27,0:27:75.24:0,75,1016	0/0:14,0:14:39.08:0,39,499	0/0:23,0:23:66.18:0,66,885	0/0:30,0:30:87.29:0,87,1195	0/0:10,0:10:24.07:0,24,315	0/0:41,0:41:99:0,117,1556	1/1:1,24:26:75.24:1298,75,0	1/1:4,30:33:78.27:1382,78,0	1/1:0,7:7:21.07:373,21,0
chr10	1959356	.	T	TA	4326.19	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-5.596;DP=678;FS=0.000;HRun=8;HaplotypeScore=64.4741;InbreedingCoeff=0.9578;MQ=83.85;MQ0=1;MQRankSum=-0.568;QD=23.13;ReadPosRankSum=-0.535;VQSLOD=5.0017;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,4:37:79.81:425,80,0	0/0:1,0:1:3:0,3,27	0/0:25,0:26:36.74:0,37,377	0/0:15,0:15:26.23:0,26,242	0/0:28,0:28:81.02:0,81,735	0/0:21,0:21:51.01:0,51,466	0/0:27,0:27:66.02:0,66,604	1/1:10,19:29:57.17:657,57,0	1/1:2,29:31:84.25:968,84,0	0/0:26,0:26:69.03:0,69,631	0/0:24,0:24:66.03:0,66,604	0/0:21,0:21:54.03:0,54,494	0/0:26,0:26:63.03:0,63,577	0/0:21,0:21:60.03:0,60,549	0/0:28,0:28:81.04:0,81,741	0/0:21,0:21:57.02:0,57,517	1/1:2,3:18:40.10:234,40,0	0/0:25,0:25:66.03:0,66,604	0/0:19,0:19:45.02:0,45,412	0/0:26,0:26:72.03:0,72,659	0/0:34,0:34:90.04:0,90,824	0/0:29,0:29:75.03:0,75,685	0/0:25,0:25:69.04:0,69,631	0/0:23,0:23:66.04:0,66,604	0/0:25,0:24:66.01:0,66,599	1/1:5,31:36:90.27:1039,90,0	1/1:6,26:32:78.23:900,78,0	1/1:1,2:3:9.03:104,9,0
chr10	1964201	.	A	ACAAC	1036.48	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=3.686;DP=474;FS=2.687;HRun=0;HaplotypeScore=85.7198;InbreedingCoeff=0.8623;MQ=58.41;MQ0=19;MQRankSum=-2.956;QD=22.53;ReadPosRankSum=1.777;VQSLOD=3.4351;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:27:61:0,61,717	0/0:7,0:6:11.97:0,12,152	0/0:19,0:8:10.78:0,11,128	0/0:16,0:9:6.79:0,7,144	0/0:19,0:16:30.02:0,30,475	0/0:18,0:16:44.50:0,44,661	0/0:26,0:23:51.09:0,51,700	1/1:4,0:2:3.01:65,3,0	1/1:8,0:15:36.07:479,36,0	0/0:24,0:23:62.20:0,62,1044	0/0:21,0:19:18.97:0,19,300	0/0:17,0:14:27.07:0,27,388	0/0:16,0:15:39.08:0,39,638	0/0:13,0:12:20.50:0,21,275	0/0:20,0:18:45.12:0,45,679	0/0:18,0:18:49.91:0,50,692	0/0:11,0:10:14.23:0,14,158	0/0:21,0:21:56.69:0,57,818	0/0:17,0:14:39.03:0,39,558	0/0:14,0:12:36.04:0,36,557	0/0:17,0:15:33.96:0,34,594	0/0:19,0:17:26.57:0,27,390	0/0:14,0:14:18.06:0,18,280	0/0:26,0:25:59.86:0,60,923	0/0:26,0:23:33.07:0,33,529	1/1:0,6:7:18.05:280,18,0	1/1:0,8:9:15.05:335,15,0	1/1:3,0:5:3.01:33,3,0
chr10	1965759	.	T	TTTTCTTTC	1396.13	PASS	AB=1.000;AC=11;AF=0.204;AN=54;BaseQRankSum=2.455;DP=399;FS=11.368;HRun=0;HaplotypeScore=85.1192;InbreedingCoeff=0.7645;MQ=55.48;MQ0=13;MQRankSum=-6.185;QD=14.54;ReadPosRankSum=-2.705;VQSLOD=0.3478;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,14:16:15.05:618,15,0	0/0:5,0:4:3.01:0,3,53	0/0:37,0:12:20.99:0,21,242	0/0:32,0:17:25.96:0,26,384	0/0:17,0:17:39.06:0,39,752	0/0:10,0:10:18.06:0,18,439	0/0:17,0:17:36.11:0,36,764	1/1:17,0:13:19.35:263,19,0	0/1:7,0:7:67.42:125,0,67	0/0:17,0:15:36.12:0,36,873	0/0:13,0:12:21.07:0,21,495	0/0:3,0:3:9.03:0,9,183	0/0:5,0:5:9.03:0,9,209	0/0:8,0:8:18.06:0,18,415	0/0:12,0:12:21.07:0,21,541	0/0:9,0:9:21.03:0,21,407	1/1:9,7:17:8.98:246,9,0	0/0:21,0:20:39.10:0,39,878	0/0:14,0:11:30.09:0,30,664	0/0:14,0:14:26.99:0,27,510	0/0:16,0:15:35.43:0,35,868	0/0:6,0:6:12.04:0,12,306	0/0:14,0:13:33.09:0,33,665	0/0:18,0:18:42.10:0,42,918	0/0:14,0:14:30.10:0,30,688	1/1:9,0:6:7.52:143,8,0	1/1:18,0:15:9.03:164,9,0	./.
chr10	1966451	.	C	CG	2755.96	PASS	AB=0.975;AC=16;AF=0.286;AN=56;BaseQRankSum=5.540;DP=555;FS=6.339;HRun=0;HaplotypeScore=54.1907;InbreedingCoeff=0.8224;MQ=61.89;MQ0=7;MQRankSum=-11.079;QD=20.57;ReadPosRankSum=-1.383;VQSLOD=4.7979;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,16:16:30.03:447,30,0	0/0:11,0:11:33.11:0,33,460	0/1:18,1:11:10.42:10,0,322	0/1:14,0:9:56.96:57,0,229	0/0:14,0:14:33.11:0,33,459	0/0:17,0:17:51.17:0,51,713	0/0:45,0:45:99:0,123,1626	1/1:3,18:13:39.10:594,39,0	1/1:0,10:10:18.06:284,18,0	0/0:23,0:22:60.20:0,60,838	0/0:11,0:11:24.08:0,24,334	0/0:19,0:19:57.18:0,57,779	0/0:19,0:19:57.18:0,57,782	0/0:26,0:26:75.25:0,75,1049	0/0:9,0:9:27.09:0,27,378	0/0:9,0:9:27.07:0,27,360	1/1:1,11:9:24.08:380,24,0	0/0:39,0:39:99:0,114,1570	0/0:17,0:16:48.15:0,48,655	0/0:11,2:12:33.04:0,33,419	0/0:64,0:63:99:0,187,2600	0/0:21,0:21:54.17:0,54,737	0/0:17,1:17:45.09:0,45,592	0/0:28,0:28:81.25:0,81,1114	0/0:16,2:16:35.91:0,36,503	1/1:2,15:14:14.30:567,14,0	1/1:0,9:9:15.05:237,15,0	1/1:0,15:13:24.08:380,24,0
chr10	1966644	.	G	GGGCTGT	8021.42	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=-6.962;DP=529;FS=26.451;HRun=0;HaplotypeScore=106.5071;InbreedingCoeff=0.8920;MQ=83.09;MQ0=0;MQRankSum=-12.702;QD=62.67;ReadPosRankSum=-0.838;VQSLOD=3.0847;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,16:23:39.13:1423,39,0	0/0:4,0:4:12.04:0,12,295	0/0:16,0:16:21.21:0,21,868	0/0:21,0:20:54.14:0,54,1106	0/0:22,0:22:63.19:0,63,1426	0/0:19,0:19:51.16:0,51,1181	0/0:35,0:35:99:0,102,2190	1/1:1,10:13:36.10:954,36,0	1/1:3,14:19:45.15:1615,45,0	0/0:27,0:27:81.28:0,81,1891	0/0:8,0:8:24.08:0,24,566	0/0:23,0:23:66.21:0,66,1576	0/0:23,0:23:60.19:0,60,1394	0/0:20,0:20:60.21:0,60,1415	0/0:21,0:21:63.20:0,63,1476	0/1:17,0:17:25.55:26,0,1106	1/1:3,11:21:36.12:1245,36,0	0/0:30,0:30:87.28:0,87,2021	0/0:20,0:20:57.17:0,57,1237	0/0:9,0:9:27.09:0,27,575	0/0:41,0:41:99:0,120,2756	0/0:18,0:18:51.18:0,51,1231	0/0:14,0:14:39.13:0,39,959	0/0:18,0:17:54.19:0,54,1327	0/0:11,0:11:30.10:0,30,739	1/1:1,9:11:27.07:899,27,0	1/1:2,14:16:42.14:1530,42,0	1/1:0,5:5:9.03:329,9,0
chr10	1966974	.	TG	T	8200.13	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=14.520;DP=728;FS=0.300;HRun=1;HaplotypeScore=70.1951;InbreedingCoeff=0.9985;MQ=80.90;MQ0=0;MQRankSum=0.353;QD=39.24;ReadPosRankSum=2.236;VQSLOD=5.5193;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,44:44:99:1719,123,0	0/0:10,0:10:27.09:0,27,413	0/0:25,0:25:63.04:0,63,819	0/0:16,0:16:18.71:0,19,626	0/0:26,0:26:75.25:0,75,1146	0/0:26,0:26:78.21:0,78,1126	0/0:23,0:23:69.21:0,69,1014	1/1:0,31:31:93.26:1205,93,0	1/1:0,35:35:99:1380,99,0	0/0:30,0:30:90.28:0,90,1340	0/0:21,0:21:54.17:0,54,804	0/0:29,0:29:87.27:0,87,1285	0/0:26,0:26:75.25:0,75,1147	0/0:25,0:25:75.25:0,75,1147	0/0:30,0:30:90.31:0,90,1375	0/0:32,0:32:96.33:0,96,1469	1/1:0,31:31:84.28:1174,84,0	0/0:14,0:14:42.13:0,42,617	0/0:19,0:19:54.18:0,54,806	0/0:21,0:21:63.20:0,63,941	0/0:51,0:51:99:0,150,2226	0/0:28,0:28:81.25:0,81,1198	0/0:22,0:22:66.21:0,66,986	0/0:21,0:21:63.15:0,63,915	0/0:24,0:24:69.22:0,69,1034	1/1:0,22:22:66.18:885,66,0	1/1:0,35:35:99:1379,99,0	1/1:0,11:11:33.11:458,33,0
chr10	1967255	.	G	GCA	6268.20	PASS	AB=0.572;AC=11;AF=0.196;AN=56;BaseQRankSum=10.848;DP=862;FS=0.000;HRun=0;HaplotypeScore=117.8399;InbreedingCoeff=0.6154;MQ=64.27;MQ0=8;MQRankSum=0.332;QD=27.86;ReadPosRankSum=-0.487;VQSLOD=5.9782;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:8,34:42:12.97:1213,0,13	0/0:6,0:7:17.89:0,18,197	0/0:36,0:23:9.10:0,9,349	0/0:40,0:27:28.93:0,29,417	0/0:22,0:22:45.14:0,45,549	0/0:18,0:19:44.94:0,45,492	0/0:34,0:34:75.22:0,75,902	1/1:18,20:38:1.82:868,2,0	1/1:7,20:27:52.69:854,53,0	0/0:33,0:35:86.93:0,87,1007	0/0:15,0:15:33.09:0,33,391	0/0:29,0:29:75.21:0,75,891	0/0:33,0:33:78.23:0,78,938	0/0:23,0:25:50.82:0,51,577	0/0:34,0:36:81.06:0,81,952	0/0:21,0:22:56.98:0,57,657	1/1:12,37:49:26.02:1435,26,0	0/0:36,0:36:91.49:0,91,1074	0/0:24,0:22:50.92:0,51,552	0/0:23,0:24:66.04:0,66,780	0/0:84,0:89:99:0,213,2465	0/0:16,0:16:27.51:0,28,416	0/0:20,0:22:53.83:0,54,608	0/0:38,0:40:99:0,105,1200	0/0:29,0:30:75.06:0,75,893	0/1:7,26:34:19.49:1088,0,19	0/1:8,13:23:9.65:331,0,10	1/1:2,10:12:30.10:479,30,0
chr10	1967978	.	GGTATAC	G	5598.46	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=12.940;DP=617;FS=16.743;HRun=0;HaplotypeScore=126.8335;InbreedingCoeff=0.9987;MQ=72.66;MQ0=0;MQRankSum=-13.514;QD=65.86;ReadPosRankSum=1.940;VQSLOD=4.4337;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:60.21:0,60,2130	0/0:10,0:10:30.10:0,30,1056	0/0:18,0:18:48.14:0,48,1514	0/0:14,0:14:38.92:0,39,1215	0/0:29,0:29:81.28:0,81,2763	0/0:27,0:27:63.22:0,63,2269	0/0:17,0:17:51.16:0,51,1745	0/0:28,0:28:81.28:0,81,2840	1/1:0,15:15:45.15:1080,45,0	0/0:26,0:26:72.25:0,72,2577	0/0:20,0:20:60.21:0,60,2104	0/0:27,0:27:78.27:0,78,2775	0/0:33,0:33:99:0,99,3258	0/0:15,0:15:45.15:0,45,1621	0/0:31,0:31:90.31:0,90,3206	0/0:16,0:16:48.16:0,48,1668	0/0:16,0:16:42.14:0,42,1511	0/0:25,0:25:72.08:0,72,2415	0/0:23,0:23:69.24:0,69,2363	0/0:25,0:25:75.26:0,75,2666	0/0:28,0:28:81.26:0,81,2792	0/0:27,0:27:78.27:0,78,2776	0/0:16,0:16:48.16:0,48,1730	0/0:17,0:17:48.16:0,48,1720	0/0:24,0:24:69.24:0,69,2425	1/1:1,25:26:72.21:1673,72,0	1/1:0,36:36:99:2341,99,0	1/1:1,7:8:21.07:504,21,0
chr10	1969042	.	CA	C	282.01	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=0.445;DP=254;FS=9.188;HRun=1;HaplotypeScore=46.3004;InbreedingCoeff=0.5446;MQ=69.60;MQ0=0;MQRankSum=-3.831;QD=23.50;ReadPosRankSum=2.812;VQSLOD=2.8262;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:48.06:0,48,645	0/0:5,0:5:15.05:0,15,237	0/0:7,0:7:18.06:0,18,271	0/0:7,0:7:14.97:0,15,222	0/0:5,0:5:2.99:0,3,25	0/0:7,0:7:18.06:0,18,287	0/0:15,0:15:45.15:0,45,694	0/0:12,0:12:36.09:0,36,528	1/1:0,12:12:27.09:375,27,0	0/0:11,0:11:33.08:0,33,502	0/0:5,0:5:12.03:0,12,169	0/0:8,0:8:18.06:0,18,287	0/0:17,0:17:42.14:0,42,632	0/0:9,0:9:18.06:0,18,264	0/0:10,0:10:17.65:0,18,258	0/0:9,0:9:27.08:0,27,405	0/0:7,0:7:18.06:0,18,266	0/0:7,0:7:21.07:0,21,321	0/0:11,0:11:26.11:0,26,448	0/0:5,0:5:9.03:0,9,143	0/0:10,0:10:18.05:0,18,265	0/0:8,0:8:12.04:0,12,192	0/0:8,0:8:12.03:0,12,165	0/0:13,0:13:18.06:0,18,285	0/0:3,0:3:3.01:0,3,47	0/0:10,0:10:25.97:0,26,209	0/0:13,0:13:26.15:0,26,204	0/0:1,0:1:3:0,3,25
chr10	1969250	.	TAG	T	856.85	PASS	AC=16;AF=0.308;AN=52;BaseQRankSum=2.479;DP=218;FS=11.526;HRun=0;HaplotypeScore=38.5734;InbreedingCoeff=0.6808;MQ=78.34;MQ0=4;MQRankSum=-2.513;QD=12.79;ReadPosRankSum=0.979;VQSLOD=1.8811;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,11:18:18.06:242,18,0	0/0:4,0:4:3.01:0,3,51	0/0:25,0:16:4.62:0,5,366	0/0:33,0:25:28.63:0,29,552	0/0:11,0:11:8.90:0,9,66	0/0:5,0:5:8.72:0,9,67	0/0:11,0:11:26.76:0,27,246	1/1:9,0:9:14.97:124,15,0	1/1:7,0:7:14.93:114,15,0	0/0:12,0:12:26.93:0,27,345	0/0:4,0:4:6.01:0,6,75	0/0:6,0:6:14.97:0,15,189	./.	1/1:2,0:2:2.90:16,3,0	0/0:3,0:3:6.02:0,6,98	0/0:5,0:5:11.99:0,12,154	1/1:4,4:7:3.01:40,3,0	0/0:6,0:6:3.23:0,3,178	0/0:2,0:2:2.99:0,3,24	0/0:4,0:4:9:0,9,100	0/0:6,0:6:12:0,12,172	./.	0/0:4,0:4:6.02:0,6,94	0/0:5,0:5:6.02:0,6,99	0/0:4,0:4:9.01:0,9,125	1/1:14,3:11:29.96:296,30,0	1/1:3,0:3:6.02:77,6,0	1/1:3,0:3:9.03:119,9,0
chr10	1969256	.	GA	G	549.10	PASS	AB=1.000;AC=15;AF=0.288;AN=52;BaseQRankSum=3.215;DP=219;FS=7.911;HRun=1;HaplotypeScore=33.0668;InbreedingCoeff=0.6456;MQ=75.74;MQ0=32;MQRankSum=-1.706;QD=6.17;ReadPosRankSum=0.548;VQSLOD=0.1601;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:12:17.42:94,17,0	0/0:2,0:2:3.01:0,3,41	0/1:25,0:15:3.22:3,0,281	0/0:28,0:20:20.43:0,20,457	0/0:9,0:8:5.11:0,5,48	0/0:5,0:4:8.62:0,9,49	0/0:10,0:10:18.15:0,18,196	1/1:5,6:7:14.97:124,15,0	1/1:0,6:6:15.05:187,15,0	0/0:13,0:11:26.93:0,27,299	0/0:5,0:3:6.01:0,6,64	0/0:8,0:6:14.96:0,15,160	./.	0/0:4,0:2:2.37:0,2,8	0/0:5,0:2:6.02:0,6,80	0/0:6,0:4:11.97:0,12,125	1/1:7,0:4:2.92:17,3,0	0/0:6,0:6:14.81:0,15,155	0/0:1,0:1:2.99:0,3,24	0/0:5,0:5:8.73:0,9,88	0/0:10,0:7:12:0,12,142	./.	0/0:4,0:2:6.02:0,6,79	0/0:4,0:3:6.02:0,6,80	0/0:4,0:3:9.01:0,9,105	1/1:19,0:12:29.67:213,30,0	1/1:3,0:3:5.84:34,6,0	1/1:4,0:3:8.65:47,9,0
chr10	1969262	.	G	GA	101.84	PASS	AB=0.860;AC=8;AF=0.160;AN=50;BaseQRankSum=2.335;DP=242;FS=17.278;HRun=0;HaplotypeScore=32.3342;InbreedingCoeff=0.3376;MQ=69.88;MQ0=60;MQRankSum=-0.878;QD=2.68;ReadPosRankSum=2.890;VQSLOD=0.7069;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:12:20.57:0,21,128	0/0:3,0:1:3.01:0,3,42	0/0:24,0:12:20.42:0,20,239	0/0:26,0:18:44.72:0,45,497	0/0:8,0:7:5.96:0,6,45	0/0:6,0:4:8.81:0,9,55	0/0:9,0:7:0.01:0,0,123	0/0:8,0:2:0:0,0,0	0/0:10,0:7:14.65:0,15,87	0/0:14,0:9:18.05:0,18,234	0/0:6,0:4:6:0,6,64	0/0:8,0:5:12:0,12,144	./.	1/1:6,0:3:3.01:33,3,0	0/0:6,0:2:5.98:0,6,61	0/0:7,0:4:9.03:0,9,124	0/0:7,0:4:2.97:0,3,20	0/1:6,0:5:15.30:15,0,131	./.	0/0:5,0:4:6.01:0,6,67	0/0:13,0:10:12.46:0,12,143	./.	0/0:8,0:4:6.02:0,6,84	0/0:8,0:4:6.02:0,6,83	0/0:9,0:4:9.02:0,9,110	0/1:11,7:8:2.92:97,0,3	1/1:2,2:3:0.53:15,1,0	1/1:1,3:3:8.78:59,9,0
chr10	1970395	.	TCACA	T	1162.04	PASS	AB=0.700;AC=5;AF=0.089;AN=56;BaseQRankSum=5.361;DP=760;FS=1.446;HRun=0;HaplotypeScore=134.5661;InbreedingCoeff=0.6862;MQ=62.92;MQ0=15;MQRankSum=0.206;QD=16.37;ReadPosRankSum=0.388;VQSLOD=3.1428;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:54:55.21:0,55,865	0/0:16,0:17:38.85:0,39,810	0/0:34,0:17:8.99:0,9,105	0/0:34,0:21:18.04:0,18,314	0/0:30,0:31:47.87:0,48,1034	0/0:15,0:15:33.11:0,33,777	0/0:34,0:34:53.97:0,54,1102	0/0:27,0:27:24.07:0,24,421	0/0:21,0:28:5.76:0,6,124	0/0:25,0:25:39.11:0,39,803	0/0:16,0:19:47.48:0,47,811	0/0:26,0:27:74.94:0,75,1599	0/0:20,0:22:50.59:0,51,957	0/0:18,0:20:47.88:0,48,1024	0/0:32,0:36:56.89:0,57,1286	0/0:21,0:22:56.91:0,57,1251	0/0:12,0:27:6:0,6,75	0/0:26,0:27:59.93:0,60,1286	0/0:16,0:15:23.99:0,24,452	0/0:24,0:24:50.96:0,51,991	0/0:41,0:40:99:0,105,2060	0/0:14,0:14:27.09:0,27,632	0/0:24,0:23:54.15:0,54,1170	0/0:40,0:40:87.26:0,87,1957	0/0:28,0:28:54.18:0,54,1236	0/1:20,13:35:38.16:476,0,38	1/1:13,16:29:39.13:599,39,0	1/1:3,3:7:17.97:214,18,0
chr10	1970712	.	T	TGGG	627.94	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=2.208;DP=421;FS=8.423;HRun=7;HaplotypeScore=68.2868;InbreedingCoeff=0.9388;MQ=85.34;MQ0=0;MQRankSum=-4.336;QD=27.30;ReadPosRankSum=-2.789;VQSLOD=0.5021;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:45.13:0,45,598	0/0:7,0:7:18.05:0,18,244	0/0:14,0:13:30.08:0,30,386	0/0:19,0:19:27.14:0,27,462	0/0:13,0:13:39.11:0,39,499	0/0:25,0:25:66.17:0,66,867	0/0:16,0:16:45.15:0,45,612	0/0:23,0:23:51.11:0,51,647	0/0:7,0:7:21.07:0,21,287	0/0:21,0:21:41.39:0,41,570	0/0:9,0:9:21.07:0,21,286	0/0:14,0:14:36.11:0,36,491	0/0:11,0:11:18.03:0,18,245	0/0:16,0:16:42.13:0,42,573	0/0:14,0:14:33.09:0,33,450	0/0:18,0:19:54.10:0,54,697	0/0:27,0:27:57.11:0,57,757	0/0:26,0:26:75.19:0,75,983	0/0:16,0:16:45.09:0,45,576	0/0:17,0:17:45.10:0,45,549	0/0:16,0:16:36.07:0,36,475	0/0:10,0:10:24.07:0,24,326	0/0:9,0:9:27.09:0,27,368	0/0:11,0:11:30.02:0,30,368	0/0:18,0:18:45.11:0,45,592	1/1:4,0:5:12:138,12,0	1/1:6,7:15:30.03:496,30,0	1/1:0,3:3:6.02:124,6,0
chr10	1970778	.	GCA	G	2812.16	PASS	AB=0.790;AC=16;AF=0.286;AN=56;BaseQRankSum=12.305;DP=494;FS=9.174;HRun=0;HaplotypeScore=72.9275;InbreedingCoeff=0.6753;MQ=69.86;MQ0=1;MQRankSum=-0.261;QD=18.38;ReadPosRankSum=1.877;VQSLOD=3.1434;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,26:30:72.06:869,72,0	0/1:7,2:9:16.14:16,0,244	0/0:22,0:18:21.56:0,22,461	0/0:19,0:18:27.09:0,27,395	0/0:27,1:28:41.05:0,41,1160	0/0:30,1:31:41.05:0,41,1158	0/0:24,1:25:16.95:0,17,747	1/1:9,17:26:51.07:588,51,0	1/1:0,7:7:18.06:223,18,0	0/0:17,0:17:45.14:0,45,686	0/0:19,0:19:48.15:0,48,763	0/0:17,0:17:45.14:0,45,708	0/0:12,0:12:24.08:0,24,393	0/1:11,1:12:0.65:1,0,320	0/0:10,0:10:30.10:0,30,492	0/0:9,0:9:18.06:0,18,276	1/1:6,18:25:44.97:534,45,0	0/0:21,0:21:54.07:0,54,790	0/0:21,0:20:42.14:0,42,688	0/0:20,1:21:19.97:0,20,776	0/0:23,0:23:48.15:0,48,762	0/0:10,0:11:27.09:0,27,438	0/0:18,1:19:14:0,14,721	0/1:12,2:14:38.17:38,0,456	0/0:15,0:15:39.13:0,39,633	0/1:2,10:12:16.14:324,0,16	1/1:6,6:12:18.06:223,18,0	1/1:0,5:5:15.05:186,15,0
chr10	1970959	.	C	CA	575.62	PASS	AB=0.794;AC=5;AF=0.089;AN=56;BaseQRankSum=-4.539;DP=529;FS=0.644;HRun=14;HaplotypeScore=68.0484;InbreedingCoeff=-0.0357;MQ=82.35;MQ0=2;MQRankSum=-0.299;QD=4.60;ReadPosRankSum=0.749;VQSLOD=1.5772;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:19,25:44:10.74:316,0,11	0/0:7,0:7:11.79:0,12,77	0/0:23,0:20:0.11:0,0,59	0/1:15,1:13:9.91:14,0,10	0/0:25,0:26:40.27:0,40,254	0/1:14,3:18:24.19:24,0,112	0/0:13,0:17:20.78:0,21,114	0/0:14,0:27:26.83:0,27,89	0/0:0,0:12:15.15:0,15,43	0/0:22,0:24:51.25:0,51,318	0/0:11,0:11:17.43:0,17,108	0/0:17,1:19:18.67:0,19,119	0/0:11,0:12:16.56:0,17,100	0/0:8,0:9:13.75:0,14,83	0/0:13,0:13:26.49:0,26,171	0/0:7,0:9:18.83:0,19,108	0/1:11,19:33:17.55:326,0,18	0/0:22,0:22:40.28:0,40,255	0/0:19,1:22:13.86:0,14,202	0/0:16,0:19:24.56:0,25,146	0/0:18,0:22:29.89:0,30,160	0/0:19,0:19:35.37:0,35,230	0/1:13,1:14:5.77:6,0,94	0/0:24,0:25:52.13:0,52,330	0/0:16,0:18:36.41:0,36,219	0/0:5,0:22:34.60:0,35,100	0/0:5,0:21:28.47:0,28,82	0/0:0,0:3:4.07:0,4,12
chr10	1971542	.	G	GAGAGGC	3489.47	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-2.965;DP=710;FS=0.600;HRun=0;HaplotypeScore=141.5926;InbreedingCoeff=0.9862;MQ=58.61;MQ0=7;MQRankSum=-7.613;QD=49.85;ReadPosRankSum=-0.565;VQSLOD=3.5740;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,120,2122	0/0:9,0:9:27.08:0,27,545	0/0:18,0:10:18.06:0,18,369	0/0:16,0:12:18.06:0,18,365	0/0:25,0:25:33.54:0,34,517	0/0:15,0:15:33.11:0,33,673	0/0:32,0:32:66.23:0,66,1390	0/0:33,0:31:69.20:0,69,1250	0/0:37,0:37:99:0,108,2292	0/0:30,0:30:72.21:0,72,1347	0/0:11,0:11:21.05:0,21,341	0/0:37,0:37:93.30:0,93,1945	0/0:19,0:19:45.15:0,45,977	0/0:28,0:28:81.27:0,81,1700	0/0:26,0:26:69.20:0,69,1358	0/0:26,0:26:69.24:0,69,1460	0/0:35,0:35:90.19:0,90,1818	0/0:27,0:27:69.24:0,69,1477	0/0:22,0:22:48.07:0,48,832	0/0:32,0:32:66.15:0,66,1194	0/0:25,0:25:60.19:0,60,1243	0/0:18,0:18:27.08:0,27,488	0/0:20,0:20:39.05:0,39,681	0/0:27,0:27:78.25:0,78,1623	0/0:18,0:18:51.14:0,51,889	1/1:18,8:26:36.10:925,36,0	1/1:17,19:34:69.24:2125,69,0	1/1:2,3:5:15.05:439,15,0
chr10	1972836	.	GTTTA	G	895.76	PASS	AB=0.893;AC=8;AF=0.211;AN=38;BaseQRankSum=4.829;DP=301;FS=0.944;HRun=0;HaplotypeScore=56.2736;InbreedingCoeff=0.4412;MQ=80.71;MQ0=0;MQRankSum=0.016;QD=11.79;ReadPosRankSum=1.495;VQSLOD=2.0381;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:15:12.04:0,12,209	0/0:7,0:7:12.04:0,12,279	./.	./.	0/0:16,0:16:12.03:0,12,234	0/0:16,0:16:33.11:0,33,729	./.	./.	0/0:5,0:8:9.03:0,9,157	0/0:7,0:7:9.03:0,9,209	0/0:12,0:12:12.03:0,12,235	0/0:7,0:7:9.03:0,9,184	0/0:6,0:6:3.01:0,3,70	0/0:7,0:7:6:0,6,94	./.	./.	1/1:11,16:27:42.14:641,42,0	0/1:19,1:20:27.73:28,0,330	0/0:17,0:17:12.03:0,12,236	0/0:7,0:7:6.02:0,6,140	./.	./.	./.	0/0:2,0:2:6.02:0,6,140	0/0:11,0:11:9.03:0,9,209	0/1:8,2:10:14.82:125,0,15	1/1:4,3:7:9.03:137,9,0	1/1:7,5:12:6.02:92,6,0
chr10	1974114	.	TC	T	1320.27	PASS	AB=0.697;AC=11;AF=0.196;AN=56;BaseQRankSum=8.330;DP=527;FS=16.598;HRun=2;HaplotypeScore=64.7141;InbreedingCoeff=0.6461;MQ=63.07;MQ0=35;MQRankSum=-3.301;QD=12.11;ReadPosRankSum=-0.410;VQSLOD=0.7082;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,9:16:24.02:256,24,0	0/0:6,0:6:12.51:0,13,165	0/0:55,0:19:22.23:0,22,510	0/0:70,0:19:32.80:0,33,355	0/0:16,0:16:33.11:0,33,484	0/0:16,0:16:37.94:0,38,519	0/0:21,0:20:60.20:0,60,884	0/1:19,0:16:5.70:375,0,6	0/1:2,11:11:26.92:158,0,27	0/0:19,0:18:44.99:0,45,642	0/0:12,0:12:24.04:0,24,320	0/0:11,0:11:29.78:0,30,432	0/0:12,0:12:26.86:0,27,388	0/0:12,0:12:27:0,27,379	0/0:11,0:11:30.03:0,30,413	0/0:13,0:13:37:0,37,511	1/1:17,5:22:24.02:273,24,0	0/0:16,0:16:48.16:0,48,697	0/0:17,0:16:48.16:0,48,669	0/0:13,0:13:32.93:0,33,424	0/0:21,0:18:51.17:0,51,733	0/0:22,0:22:60.10:0,60,819	0/0:15,0:14:30.10:0,30,437	0/0:21,0:20:51.74:0,52,710	0/0:18,1:19:36.67:0,37,507	0/1:2,9:9:13.11:240,0,13	1/1:2,4:4:9.01:106,9,0	1/1:13,5:13:6.02:76,6,0
chr10	1974115	.	C	CT	1524.07	PASS	AB=0.967;AC=12;AF=0.214;AN=56;BaseQRankSum=8.392;DP=523;FS=14.769;HRun=1;HaplotypeScore=67.2993;InbreedingCoeff=0.6856;MQ=61.13;MQ0=36;MQRankSum=-3.986;QD=13.86;ReadPosRankSum=-0.512;VQSLOD=1.3829;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,3:18:24.07:322,24,0	0/0:5,0:5:12.04:0,12,166	0/0:53,0:17:22.28:0,22,504	0/0:70,0:19:32.82:0,33,347	0/0:16,0:16:33.11:0,33,455	0/0:16,0:16:39.08:0,39,508	0/0:21,0:20:60.20:0,60,830	1/1:3,15:15:0.13:422,0,0	0/1:13,1:12:24.09:182,0,24	0/0:19,0:18:45.14:0,45,603	0/0:11,0:11:24.04:0,24,306	0/0:12,0:11:30.10:0,30,410	0/0:12,0:12:26.73:0,27,369	0/0:12,0:12:26.94:0,27,367	0/0:12,0:12:27.63:0,28,382	0/0:13,0:13:37:0,37,484	1/1:6,16:22:24.08:314,24,0	0/0:16,0:16:48.16:0,48,659	0/0:17,0:16:48.16:0,48,647	0/0:13,0:13:33.09:0,33,421	0/0:21,0:18:51.17:0,51,697	0/0:22,0:22:60.10:0,60,790	0/0:14,0:13:30.09:0,30,409	0/0:21,0:20:54.52:0,55,702	0/0:17,0:17:35.77:0,36,488	0/1:11,0:9:13.03:276,0,13	1/1:6,0:4:9.01:95,9,0	1/1:7,10:12:6.02:76,6,0
chr10	1974172	.	CT	C	426.65	PASS	AB=0.860;AC=3;AF=0.054;AN=56;BaseQRankSum=3.151;DP=501;FS=4.635;HRun=2;HaplotypeScore=61.7602;InbreedingCoeff=-0.0585;MQ=60.35;MQ0=44;MQRankSum=-4.459;QD=5.69;ReadPosRankSum=-3.163;VQSLOD=-0.4118;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,2:21:17.98:0,18,201	0/0:2,0:1:2.94:0,3,18	0/0:65,0:22:48.11:0,48,546	0/0:65,0:19:27.87:0,28,471	0/0:14,0:14:35.77:0,36,455	0/0:11,0:11:31.56:0,32,352	0/0:22,0:21:56.20:0,56,738	0/1:37,5:38:84.39:332,0,84	0/0:14,1:14:25.87:0,26,307	0/0:12,1:13:28.07:0,28,451	0/0:8,0:8:21.03:0,21,264	0/0:7,0:7:15.05:0,15,199	0/0:9,0:8:18.06:0,18,244	0/0:6,0:6:15.04:0,15,204	0/0:12,0:10:19.05:0,19,281	0/0:6,0:6:18.06:0,18,249	0/0:24,0:24:58.92:0,59,760	0/0:23,0:22:60.02:0,60,756	0/0:13,0:12:36.11:0,36,473	0/0:13,0:12:31.90:0,32,428	0/0:14,0:13:35.79:0,36,442	0/0:13,0:12:30.05:0,30,370	0/0:13,0:12:36.12:0,36,498	0/0:22,0:21:54.09:0,54,693	0/0:7,0:7:12.04:0,12,171	0/1:12,6:17:99:182,0,327	0/1:14,1:14:4.17:4,0,349	0/0:7,0:4:7.06:0,7,111
chr10	1974266	.	G	GCTTTA	10349.19	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-9.237;DP=558;FS=11.847;HRun=0;HaplotypeScore=100.6199;InbreedingCoeff=0.9781;MQ=82.41;MQ0=0;MQRankSum=-8.121;QD=74.45;ReadPosRankSum=0.251;VQSLOD=5.9503;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,29:31:87.30:2629,87,0	0/0:6,0:5:12.04:0,12,267	0/0:12,0:12:33.11:0,33,719	0/0:23,0:23:57.16:0,57,1137	0/0:25,0:25:72.24:0,72,1520	0/0:15,0:15:42.14:0,42,917	0/0:25,0:24:72.22:0,72,1484	1/1:5,17:27:78.21:2212,78,0	1/1:4,7:13:9.10:811,9,0	0/0:19,0:18:51.18:0,51,1138	0/0:23,0:23:60.21:0,60,1318	0/0:16,0:16:48.16:0,48,1052	0/0:19,0:19:51.18:0,51,1136	0/0:15,0:15:42.02:0,42,936	0/0:23,0:23:60.68:0,61,1338	0/0:17,0:17:51.15:0,51,1053	1/1:2,20:24:48.16:1550,48,0	0/0:17,0:17:51.15:0,51,1069	0/0:18,0:18:48.16:0,48,1030	0/0:23,0:23:69.22:0,69,1445	0/0:53,0:53:99:0,157,3435	0/0:19,0:19:51.16:0,51,1053	0/0:17,0:17:48.16:0,48,1045	0/0:23,0:23:66.21:0,66,1413	0/0:11,0:11:30.10:0,30,668	1/1:3,12:19:48.15:1369,48,0	1/1:3,15:19:45.15:1391,45,0	1/1:0,4:5:12.04:386,12,0
chr10	1974471	.	G	GA	1067.34	PASS	AB=0.940;AC=12;AF=0.214;AN=56;BaseQRankSum=-2.804;DP=471;FS=22.251;HRun=13;HaplotypeScore=70.7608;InbreedingCoeff=0.1947;MQ=55.21;MQ0=8;MQRankSum=-1.284;QD=5.47;ReadPosRankSum=-1.828;VQSLOD=0.1910;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,30:35:48.11:469,48,0	0/0:8,1:8:20.60:0,21,143	0/0:16,0:3:4.65:0,5,19	0/1:15,0:7:1.15:1,0,30	0/0:17,0:18:25.71:0,26,170	0/0:14,0:13:22.91:0,23,146	0/1:18,1:24:6.55:7,0,186	1/1:16,18:32:15.78:403,16,0	0/1:13,0:13:4.28:75,0,4	0/0:14,1:13:4.32:0,4,124	0/1:8,0:9:10.42:10,0,54	0/0:16,0:16:20.66:0,21,119	0/0:14,0:13:20.76:0,21,143	0/1:15,1:16:26.62:27,0,117	0/0:14,0:16:28.57:0,29,183	0/0:9,0:11:18.82:0,19,112	0/1:8,13:21:43.25:211,0,43	0/0:15,0:14:16.95:0,17,116	0/0:20,1:23:18.71:0,19,163	0/0:15,0:17:26.04:0,26,158	0/0:13,0:13:21.67:0,22,134	0/1:14,0:14:10.02:10,0,82	0/0:20,0:19:23.22:0,23,158	0/0:19,1:22:14.43:0,14,220	0/1:11,0:13:5.06:5,0,75	0/0:3,0:7:11.78:0,12,33	0/0:6,0:13:5.54:0,6,33	0/0:6,0:11:15.98:0,16,44
chr10	1974485	.	GA	G	658.71	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=6.655;DP=495;FS=2.341;HRun=13;HaplotypeScore=62.3738;InbreedingCoeff=0.9339;MQ=60.41;MQ0=6;MQRankSum=-0.625;QD=13.72;ReadPosRankSum=0.414;VQSLOD=4.1820;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:75.20:0,75,836	0/0:10,0:9:21.06:0,21,242	0/0:28,0:7:2.71:0,3,67	0/0:22,0:9:13.56:0,14,166	0/0:17,0:17:39.10:0,39,437	0/0:14,0:14:33.09:0,33,372	0/0:23,0:23:56.73:0,57,617	0/0:38,0:37:83.89:0,84,904	1/1:12,1:13:21.48:156,21,0	0/0:22,0:21:63.10:0,63,698	0/0:9,0:9:27.08:0,27,306	0/0:13,0:12:24.02:0,24,247	0/0:12,0:10:24.07:0,24,274	0/0:15,0:15:39.07:0,39,433	0/0:15,0:15:35.68:0,36,375	0/0:12,0:12:26.51:0,27,259	0/0:23,0:23:51.15:0,51,577	0/0:12,0:11:24.53:0,25,265	0/0:30,0:30:74.88:0,75,794	0/0:16,0:15:39.08:0,39,420	0/0:12,0:13:30:0,30,306	0/0:11,0:11:23.92:0,24,274	0/0:17,0:16:30.62:0,31,403	0/0:23,0:23:54.01:0,54,588	0/0:11,0:10:23.97:0,24,243	1/1:6,8:14:30.08:336,30,0	1/1:3,6:9:15:135,15,0	1/1:4,8:11:21.48:188,21,0
chr10	1974572	.	G	GCC	493.17	PASS	AB=1.000;AC=8;AF=0.148;AN=54;BaseQRankSum=4.286;DP=395;FS=2.748;HRun=7;HaplotypeScore=85.3601;InbreedingCoeff=0.7730;MQ=71.38;MQ0=4;MQRankSum=-0.855;QD=7.47;ReadPosRankSum=-0.405;VQSLOD=-0.4494;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:22:36.10:0,36,418	0/1:3,0:3:0:0,0,0	0/0:19,0:15:19.73:0,20,200	0/1:25,0:16:12.52:13,0,135	0/0:22,0:22:48.06:0,48,558	0/0:20,0:20:45.11:0,45,523	0/0:17,0:16:32.59:0,33,354	0/0:13,0:11:12.02:0,12,140	1/1:2,9:11:18.06:295,18,0	0/0:13,0:13:21.05:0,21,241	0/0:15,0:15:39.08:0,39,440	0/0:15,0:14:33.10:0,33,381	0/0:10,0:9:27.08:0,27,313	0/0:12,0:12:33.09:0,33,383	0/0:16,0:16:39.07:0,39,439	0/0:5,0:5:9.02:0,9,105	0/0:13,0:13:26.97:0,27,286	0/0:12,0:12:33.10:0,33,384	0/0:21,0:20:45.09:0,45,504	0/0:10,0:10:17.99:0,18,194	0/0:22,0:21:45.01:0,45,522	0/0:10,0:10:15.03:0,15,175	0/0:17,0:17:32.98:0,33,356	0/0:13,0:12:30.05:0,30,333	0/0:9,0:9:17.95:0,18,191	1/1:17,0:15:23.91:186,24,0	1/1:7,0:8:17.95:143,18,0	./.
chr10	1974575	.	C	CCCA	984.03	PASS	AC=6;AF=0.111;AN=54;BaseQRankSum=1.182;DP=393;FS=6.204;HRun=0;HaplotypeScore=95.1092;InbreedingCoeff=0.9308;MQ=70.97;MQ0=4;MQRankSum=-2.484;QD=25.90;ReadPosRankSum=-0.202;VQSLOD=3.4154;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:20:39.09:0,39,624	0/0:3,0:3:5.90:0,6,40	0/0:20,0:15:26.23:0,26,347	0/0:28,0:17:13.47:0,13,297	0/0:20,0:20:54.06:0,54,854	0/0:20,0:20:54.09:0,54,821	0/0:17,0:16:44.98:0,45,623	0/0:13,0:11:23.96:0,24,291	1/1:11,0:11:14.20:47,14,0	0/0:12,0:12:27.07:0,27,403	0/0:15,0:15:42.13:0,42,669	0/0:14,0:13:22.54:0,23,528	0/0:11,0:10:30.03:0,30,471	0/0:12,0:12:36.08:0,36,574	0/0:16,0:16:42.10:0,42,670	0/0:5,0:5:12.03:0,12,177	0/0:12,0:12:33.04:0,33,484	0/0:13,0:13:33.11:0,33,547	0/0:22,0:20:51.16:0,51,790	0/0:11,0:11:28.84:0,29,373	0/0:20,0:19:45.15:0,45,756	0/0:11,0:11:21.05:0,21,304	0/0:15,0:15:39.06:0,39,586	0/0:12,0:11:30.10:0,30,496	0/0:9,0:9:23.81:0,24,333	1/1:5,14:17:25.93:616,26,0	1/1:3,5:8:21.07:459,21,0	./.
chr10	1974696	.	CCT	C	416.49	PASS	AB=0.945;AC=26;AF=0.464;AN=56;BaseQRankSum=4.533;DP=228;FS=18.134;HRun=0;HaplotypeScore=58.3449;InbreedingCoeff=0.0378;MQ=26.20;MQ0=16;MQRankSum=-0.966;QD=2.83;ReadPosRankSum=0.780;VQSLOD=0.1689;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:32,0:29:34.28:67,0,34	0/0:1,0:1:2.99:0,3,23	0/0:5,0:1:3.01:0,3,34	0/0:8,0:0:2.80:0,3,13	0/0:8,0:8:3.01:0,3,40	1/1:7,0:5:5.33:23,5,0	0/1:15,1:12:41.50:41,0,81	0/1:8,0:6:32.36:55,0,32	1/1:2,0:1:3.01:30,3,0	0/1:8,1:7:12.67:13,0,207	0/0:7,0:7:0.84:0,1,2	0/0:3,0:2:2.80:0,3,13	0/1:3,0:2:0.07:0,0,0	1/1:4,0:3:0.88:9,1,0	0/0:7,0:3:4.26:0,4,45	1/1:4,0:4:2.50:9,2,0	0/1:8,0:8:19.45:19,0,64	1/1:3,0:3:3:25,3,0	0/1:9,2:9:25.42:25,0,66	0/0:8,1:8:3.71:0,4,12	0/0:24,1:18:6.38:0,6,52	0/0:4,0:4:2.62:0,3,52	1/1:7,1:7:2.04:6,2,0	1/1:9,1:7:2.89:32,3,0	0/0:4,0:3:0:0,0,0	0/1:12,2:11:26.43:80,0,26	1/1:3,0:2:3.01:30,3,0	1/1:3,2:4:9:91,9,0
chr10	1974700	.	T	TC	744.55	PASS	AB=0.941;AC=33;AF=0.589;AN=56;BaseQRankSum=2.761;DP=284;FS=0.928;HRun=1;HaplotypeScore=77.7801;InbreedingCoeff=0.0682;MQ=25.39;MQ0=30;MQRankSum=-0.288;QD=3.20;ReadPosRankSum=-1.682;VQSLOD=-0.6971;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:23,10:30:24.09:221,24,0	0/0:1,0:1:3.01:0,3,38	0/0:5,0:1:3:0,3,29	0/0:14,0:0:0.47:0,0,1	0/0:10,1:10:3:0,3,39	0/1:9,1:7:1.64:2,0,2	0/1:20,1:14:49.98:50,0,60	1/1:7,2:7:10.24:119,10,0	1/1:3,0:2:5.16:25,5,0	0/1:11,2:10:18.42:18,0,183	0/0:8,2:10:0.32:0,0,5	0/0:4,0:2:2.64:0,3,13	1/1:2,1:2:2.62:17,3,0	1/1:6,1:6:5.43:31,5,0	0/1:8,0:4:10.61:11,0,35	1/1:5,0:5:3.01:33,3,0	0/1:8,0:8:19.86:20,0,65	1/1:3,0:3:3:25,3,0	0/1:12,2:10:22.08:22,0,62	1/1:9,1:9:6.06:26,6,0	0/1:26,5:21:29.45:29,0,30	0/0:6,0:6:3.01:0,3,39	1/1:9,2:9:1.17:3,1,0	1/1:9,3:8:1.72:4,2,0	0/1:6,0:5:0.19:0,0,0	1/1:12,5:14:14.69:210,15,0	1/1:2,1:2:2.04:6,2,0	0/1:5,0:4:7.41:13,0,7
chr10	1974703	.	CTCCT	C	928.36	PASS	AB=0.928;AC=30;AF=0.536;AN=56;BaseQRankSum=6.050;DP=333;FS=3.947;HRun=0;HaplotypeScore=76.4723;InbreedingCoeff=0.0055;MQ=25.22;MQ0=39;MQRankSum=-1.021;QD=3.68;ReadPosRankSum=0.754;VQSLOD=0.9405;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:28,7:32:35.13:222,0,35	0/0:1,0:1:3.01:0,3,38	0/0:7,0:1:3.01:0,3,41	0/0:21,0:0:6.01:0,6,62	0/0:12,0:11:3.01:0,3,75	0/1:10,2:9:26.22:48,0,26	0/1:22,1:15:58.57:59,0,196	0/1:15,0:11:45.88:63,0,46	1/1:3,1:2:5.91:69,6,0	0/1:18,0:12:27.16:27,0,276	1/1:9,2:11:4.47:21,4,0	0/0:4,0:2:2.88:0,3,15	1/1:3,0:2:2.46:14,2,0	1/1:6,1:6:4.83:27,5,0	0/0:9,0:5:0.76:0,1,46	1/1:6,0:6:5.78:36,6,0	0/1:6,2:8:56.12:56,0,92	1/1:4,1:4:2.51:61,3,0	0/1:15,0:11:30.92:31,0,80	1/1:9,1:9:2.52:38,3,0	0/1:35,1:24:8.28:8,0,140	0/0:6,1:6:2.81:0,3,87	0/0:13,1:12:7.32:0,7,59	1/1:14,1:10:2.67:27,3,0	0/0:6,0:5:2.29:0,2,6	1/1:20,1:14:1.63:126,2,0	1/1:3,0:2:3:25,3,0	1/1:4,1:4:9.02:122,9,0
chr10	1974709	.	T	TC	1135.90	PASS	AB=0.929;AC=24;AF=0.429;AN=56;BaseQRankSum=6.738;DP=428;FS=5.773;HRun=1;HaplotypeScore=93.0439;InbreedingCoeff=-0.1040;MQ=24.23;MQ0=61;MQRankSum=0.916;QD=3.90;ReadPosRankSum=2.109;VQSLOD=0.6234;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:42,0:34:23.93:90,0,24	0/0:4,0:1:3.01:0,3,39	0/0:13,0:1:2.92:0,3,17	0/0:27,0:1:6:0,6,62	0/0:17,0:14:2.93:0,3,39	0/1:14,0:9:20.99:21,0,30	0/1:25,3:20:99:112,0,102	0/1:27,2:19:93.24:93,0,238	1/1:3,2:3:5.89:41,6,0	0/1:20,1:15:36.77:37,0,251	0/1:10,2:12:2.53:27,0,3	0/0:7,0:4:5.25:0,5,36	0/0:3,0:2:2.68:0,3,12	0/0:8,0:7:2.45:0,2,23	0/1:9,2:5:9.26:9,0,33	1/1:5,2:7:3.73:27,4,0	0/1:9,1:9:69.69:70,0,90	0/1:5,0:4:18.20:18,0,24	0/1:16,4:15:76.27:116,0,76	1/1:11,2:9:9.03:109,9,0	0/0:41,1:27:11.18:0,11,189	0/0:7,1:7:3.01:0,3,39	0/1:18,2:17:31.98:34,0,32	1/1:16,2:13:9.09:75,9,0	0/0:6,0:5:1.25:0,1,4	1/1:21,5:17:5.86:282,6,0	0/1:5,0:4:29.14:29,0,29	1/1:3,2:4:9.01:102,9,0
chr10	1974710	.	CTCCT	C	1012.62	PASS	AB=0.988;AC=24;AF=0.429;AN=56;BaseQRankSum=6.372;DP=438;FS=6.610;HRun=0;HaplotypeScore=91.8431;InbreedingCoeff=-0.2460;MQ=24.34;MQ0=62;MQRankSum=1.017;QD=2.91;ReadPosRankSum=-0.192;VQSLOD=0.7887;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:40,0:33:8.63:217,0,9	0/0:4,0:1:3.01:0,3,50	0/0:13,0:1:3.01:0,3,37	0/0:31,0:1:6.01:0,6,84	0/0:17,0:14:3.01:0,3,87	0/1:14,0:9:4.81:5,0,68	0/1:27,0:20:99:127,0,264	0/1:30,0:20:44.39:44,0,304	0/1:5,0:3:12.93:30,0,13	0/1:23,0:17:80.60:81,0,396	1/1:12,0:12:4.82:18,5,0	0/0:7,0:4:1.08:0,1,4	0/0:3,0:2:0.89:0,1,2	0/1:8,0:7:0.83:22,0,1	0/1:12,0:6:29.54:30,0,42	1/1:8,0:8:7.66:48,8,0	0/1:10,0:9:29.92:30,0,85	0/1:5,0:4:21.73:22,0,36	0/1:21,1:16:61.99:62,0,145	1/1:13,0:9:11.31:95,11,0	0/1:41,1:27:22.05:22,0,303	0/0:9,0:8:2.78:0,3,87	0/1:22,0:19:3.14:3,0,106	0/1:18,0:13:2.82:6,0,3	0/0:6,0:5:3.22:0,3,12	0/1:23,3:17:41.39:268,0,41	0/1:5,0:4:0.48:0,0,40	1/1:5,0:4:0.41:24,0,0
chr10	1974712	.	CCT	C	746.34	PASS	AB=0.982;AC=24;AF=0.429;AN=56;BaseQRankSum=7.310;DP=462;FS=19.330;HRun=0;HaplotypeScore=90.6880;InbreedingCoeff=-0.1537;MQ=24.81;MQ0=65;MQRankSum=-2.317;QD=2.55;ReadPosRankSum=1.308;VQSLOD=0.6432;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:41,0:33:99:229,0,115	0/0:4,0:1:3.01:0,3,53	0/0:17,1:1:3.01:0,3,42	0/0:35,0:1:5.97:0,6,70	0/0:17,0:14:3.01:0,3,53	0/1:14,0:9:40.67:41,0,44	0/1:27,0:20:74.40:74,0,173	0/1:30,0:20:66.29:66,0,257	0/1:5,1:4:45.02:45,0,47	0/1:22,0:16:41.54:42,0,287	1/1:11,1:12:4.69:25,5,0	1/1:6,0:4:4.63:16,5,0	0/0:4,0:3:0.44:0,0,1	1/1:9,0:8:6.13:55,6,0	0/1:12,1:7:11.36:11,0,80	1/1:8,0:8:6.78:41,7,0	0/1:10,0:9:40.94:41,0,44	0/1:5,0:4:20.79:21,0,38	0/1:24,0:17:12.47:12,0,106	0/1:14,0:10:3.54:4,0,34	0/0:44,1:29:2.84:0,3,248	0/0:10,0:9:5.56:0,6,90	0/0:22,0:20:3.14:0,3,92	1/1:17,1:13:6.31:29,6,0	0/0:7,0:6:2.04:0,2,6	0/1:27,0:18:36.04:125,0,36	0/0:5,1:5:3.83:0,4,39	1/1:5,0:4:1.87:20,2,0
chr10	1974717	.	CTCCT	C	1327.36	PASS	AB=0.948;AC=21;AF=0.375;AN=56;BaseQRankSum=6.665;DP=547;FS=9.182;HRun=0;HaplotypeScore=106.3743;InbreedingCoeff=-0.3019;MQ=25.55;MQ0=78;MQRankSum=-1.705;QD=3.48;ReadPosRankSum=3.803;VQSLOD=1.3304;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:44,1:37:99:221,0,210	0/1:6,0:3:28.66:29,0,76	0/0:27,0:4:6.49:0,6,93	0/0:50,0:1:5.96:0,6,95	0/0:18,1:16:3.01:0,3,87	0/0:14,0:9:7.99:0,8,108	0/1:30,1:23:99:152,0,352	0/1:34,1:23:99:122,0,429	0/0:7,0:5:0.33:0,0,61	0/1:20,4:18:99:164,0,381	1/1:13,1:12:7.38:39,7,0	1/1:8,0:5:4.56:65,5,0	0/0:4,0:3:1.52:0,2,3	0/1:9,1:9:40.24:41,0,40	0/1:13,0:7:9.73:10,0,87	1/1:7,1:8:7.70:57,8,0	0/0:12,0:11:10.50:0,10,167	0/1:5,0:4:7.75:8,0,45	0/1:30,3:24:99:149,0,152	0/1:16,1:13:31.65:106,0,32	0/1:44,3:31:15.40:15,0,364	0/0:13,1:13:7.17:0,7,135	0/1:23,3:23:19.75:20,0,145	0/1:19,2:15:25.42:25,0,38	0/0:9,0:8:5.71:0,6,32	0/1:30,2:22:99:244,0,191	0/0:9,0:8:2.43:0,2,126	0/1:5,0:4:11.57:15,0,12
chr10	1974719	.	CCT	C	760.24	PASS	AB=0.974;AC=21;AF=0.375;AN=56;BaseQRankSum=8.080;DP=575;FS=33.135;HRun=0;HaplotypeScore=105.2155;InbreedingCoeff=-0.4131;MQ=25.62;MQ0=82;MQRankSum=-2.524;QD=1.99;ReadPosRankSum=3.352;VQSLOD=0.2740;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:46,1:38:99:235,0,137	0/0:6,0:3:8.05:0,8,71	0/0:32,0:5:9.50:0,9,125	0/0:55,0:2:6.02:0,6,78	0/0:18,1:16:3.01:0,3,53	0/1:16,0:10:29.54:30,0,79	0/1:31,1:24:99:106,0,272	0/1:35,1:23:61.44:61,0,311	0/1:6,1:5:41.84:42,0,52	0/1:23,1:18:49.42:49,0,267	1/1:16,0:13:7.14:39,7,0	0/1:11,0:7:13.51:14,0,42	0/0:4,0:3:2.77:0,3,13	0/1:10,1:10:38.96:57,0,39	0/1:13,0:7:21.90:22,0,73	1/1:9,0:8:5.23:16,5,0	0/1:13,0:12:45.32:45,0,117	0/1:7,0:6:11.95:12,0,73	0/1:33,0:23:46.94:47,0,144	0/1:17,0:13:22.04:22,0,49	0/0:46,1:31:0.67:0,1,290	0/0:14,0:13:6.60:0,7,108	0/1:25,1:23:22.72:23,0,131	0/1:20,2:16:24.44:24,0,45	0/1:9,0:8:0.96:1,0,25	0/1:33,0:22:67.04:67,0,156	0/0:9,0:8:11.19:0,11,155	0/0:5,0:4:3.79:0,4,31
chr10	1974724	.	CTCCT	C	1371.01	PASS	AB=0.958;AC=22;AF=0.393;AN=56;BaseQRankSum=6.672;DP=646;FS=5.982;HRun=0;HaplotypeScore=122.3710;InbreedingCoeff=-0.4885;MQ=28.69;MQ0=92;MQRankSum=-3.289;QD=2.93;ReadPosRankSum=3.076;VQSLOD=1.9379;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:43,5:39:99:260,0,265	0/1:6,1:4:44.54:45,0,53	0/0:44,0:5:14.41:0,14,158	0/0:68,1:5:11.93:0,12,172	0/0:19,0:15:6.02:0,6,132	0/1:17,0:13:4.36:4,0,149	0/1:33,0:24:99:123,0,455	0/1:31,4:23:99:291,0,304	0/1:7,1:5:14.11:14,0,50	0/1:27,0:21:85.53:86,0,384	1/1:16,1:13:5.45:53,5,0	0/1:13,1:9:35.01:35,0,124	0/1:6,0:5:12.24:12,0,42	0/1:15,0:14:25.45:25,0,200	0/1:17,0:11:41.39:41,0,103	0/1:9,0:7:1.42:45,0,1	0/1:16,0:14:26.48:26,0,182	0/0:9,0:8:10.28:0,10,134	0/1:34,1:24:79.98:80,0,262	0/1:18,1:14:54.11:54,0,66	0/1:49,2:33:19.91:20,0,465	0/0:19,0:17:15.27:0,15,243	0/1:26,0:23:40.47:40,0,144	0/1:24,2:20:10.38:10,0,113	0/1:11,0:11:5.06:5,0,138	0/1:27,3:22:99:254,0,288	0/0:11,0:10:8.06:0,8,177	0/0:6,0:5:2.58:0,3,98
chr10	1974726	.	CCT	C	754.87	PASS	AB=0.957;AC=19;AF=0.339;AN=56;BaseQRankSum=7.660;DP=659;FS=12.585;HRun=0;HaplotypeScore=118.9407;InbreedingCoeff=-0.3406;MQ=30.59;MQ0=92;MQRankSum=-5.105;QD=2.10;ReadPosRankSum=3.848;VQSLOD=1.0107;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:45,0:36:99:153,0,224	0/1:7,0:4:9.10:9,0,14	0/0:49,1:7:13.82:0,14,147	0/0:72,1:5:0.22:0,0,99	0/0:20,0:15:6.02:0,6,102	0/0:18,1:14:12.07:0,12,141	0/1:30,3:24:99:102,0,357	0/1:34,0:23:53.17:53,0,242	0/1:7,1:5:12.12:12,0,56	0/1:26,2:22:89.83:90,0,288	1/1:17,0:13:4.62:19,5,0	0/0:15,1:11:4.64:0,5,242	0/1:4,1:5:12.05:12,0,49	0/1:16,0:15:1.08:1,0,210	0/1:16,0:10:32.87:33,0,93	0/1:9,0:7:1.98:11,0,2	0/1:14,1:13:37.61:38,0,174	0/1:9,0:8:2.08:2,0,90	0/1:32,5:27:99:216,0,236	0/1:18,1:14:3.55:4,0,77	0/0:50,2:34:3.19:0,3,426	0/0:17,2:17:6.47:0,6,195	0/1:26,1:24:27.63:28,0,128	0/0:26,1:21:7.27:0,7,176	0/0:9,0:10:9.53:0,10,153	0/1:28,1:21:99:113,0,249	0/0:12,0:11:17.73:0,18,257	0/1:6,0:5:2.37:2,0,48
chr10	1975411	.	CAT	C	2375.68	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.845;DP=632;FS=1.082;HRun=0;HaplotypeScore=77.5696;InbreedingCoeff=0.9985;MQ=71.23;MQ0=2;MQRankSum=-0.630;QD=39.59;ReadPosRankSum=1.705;VQSLOD=5.2771;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,160,3057	0/0:8,0:8:24.08:0,24,464	0/0:19,0:20:56.37:0,56,714	0/0:18,0:18:47.36:0,47,675	0/0:29,0:29:87.30:0,87,1668	0/0:14,0:14:42.11:0,42,744	0/0:25,0:25:72.23:0,72,1348	0/0:24,0:24:69.23:0,69,1296	0/0:19,0:19:57.20:0,57,1101	0/0:38,0:38:99:0,114,2106	0/0:19,0:19:57.18:0,57,1056	0/0:15,0:15:45.14:0,45,825	0/0:22,0:22:63.20:0,63,1167	0/0:24,0:24:66.21:0,66,1231	0/0:25,0:25:75.26:0,75,1432	0/0:17,0:17:51.16:0,51,942	0/0:31,0:31:90.29:0,90,1688	0/0:16,0:16:45.15:0,45,850	0/0:21,0:21:60.18:0,60,1086	0/0:21,0:21:60.21:0,60,1159	0/0:37,0:36:99:0,111,2062	0/0:25,0:25:75.26:0,75,1431	0/0:15,0:15:45.13:0,45,833	0/0:13,0:13:39.11:0,39,718	0/0:22,0:22:66.21:0,66,1233	1/1:0,33:31:93.27:1374,93,0	1/1:0,19:19:51.17:780,51,0	1/1:0,7:8:24.08:365,24,0
chr10	1975580	.	A	AT	737.50	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-6.579;DP=725;FS=4.612;HRun=0;HaplotypeScore=65.0900;InbreedingCoeff=0.9914;MQ=92.73;MQ0=0;MQRankSum=-1.108;QD=35.12;ReadPosRankSum=0.492;VQSLOD=3.1236;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,157,2179	0/0:10,0:10:30.05:0,30,381	0/0:36,0:36:96.23:0,96,1250	0/0:28,0:27:75.20:0,75,1008	0/0:36,0:36:99:0,108,1456	0/0:35,0:35:99:0,105,1419	0/0:23,0:23:69.16:0,69,878	0/0:27,0:27:76.14:0,76,1050	1/1:0,21:21:54.12:832,54,0	0/0:46,0:46:99:0,135,1756	0/0:28,0:28:78.22:0,78,1067	0/0:12,0:12:36.12:0,36,503	0/0:20,0:20:60.10:0,60,796	0/0:27,0:27:81.26:0,81,1115	0/0:26,0:26:78.23:0,78,1043	0/0:16,0:16:48.15:0,48,654	0/0:26,0:26:78.26:0,78,1089	0/0:26,0:26:78.20:0,78,1035	0/0:20,0:20:60.18:0,60,821	0/0:22,0:22:60.18:0,60,805	0/0:37,0:37:99:0,111,1517	0/0:23,0:23:66.17:0,66,898	0/0:19,0:19:57.18:0,57,779	0/0:14,0:14:42.14:0,42,587	0/0:21,0:21:63.19:0,63,850	0/0:42,0:42:99:0,126,1685	0/0:26,0:25:78.18:0,78,1048	0/0:6,0:6:18.06:0,18,251
chr10	1978039	.	A	AAAAAC	763.83	PASS	AB=0.783;AC=5;AF=0.089;AN=56;BaseQRankSum=6.703;DP=521;FS=4.339;HRun=0;HaplotypeScore=129.3442;InbreedingCoeff=-0.0909;MQ=44.76;MQ0=25;MQRankSum=-4.178;QD=8.30;ReadPosRankSum=-0.772;VQSLOD=2.5463;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:25:38.54:121,0,39	0/0:9,0:6:18.03:0,18,302	0/0:21,0:5:5.76:0,6,45	0/0:17,0:5:4.78:0,5,30	0/0:33,0:33:79.95:0,80,1139	0/0:26,0:25:47.98:0,48,696	0/0:14,0:13:32.94:0,33,395	0/0:28,0:24:8.32:0,8,389	0/0:5,0:8:6.11:0,6,30	0/0:24,0:23:53.01:0,53,746	0/0:12,0:10:23.80:0,24,219	0/0:21,0:20:53.73:0,54,633	0/0:14,0:14:35.06:0,35,521	0/0:21,0:20:50.86:0,51,627	0/0:13,0:13:32.88:0,33,457	0/0:19,0:19:45.07:0,45,710	0/1:14,0:11:3.08:3,0,34	0/0:22,0:20:48.15:0,48,813	0/0:20,0:18:42.44:0,42,462	0/0:25,0:25:67.51:0,68,950	0/0:6,0:4:7.08:0,7,113	0/0:14,0:14:35.95:0,36,530	0/0:20,0:20:56.08:0,56,753	0/0:22,0:22:32.79:0,33,496	0/0:19,0:19:54.01:0,54,806	0/1:16,6:22:99:488,0,214	0/1:3,0:12:13.05:60,0,13	0/1:6,5:12:20.85:203,0,21
chr10	1978041	.	A	AG	426.56	PASS	AB=0.836;AC=4;AF=0.071;AN=56;BaseQRankSum=2.710;DP=525;FS=7.094;HRun=0;HaplotypeScore=84.2900;InbreedingCoeff=-0.0881;MQ=44.79;MQ0=23;MQRankSum=-5.227;QD=5.54;ReadPosRankSum=2.000;VQSLOD=2.3121;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:25,2:25:78.08:87,0,78	0/0:9,0:6:18.03:0,18,227	0/0:26,0:5:5.59:0,6,26	0/0:19,0:5:5.88:0,6,37	0/0:36,0:36:95.48:0,95,963	0/0:24,0:23:61.16:0,61,614	0/0:14,0:13:33.73:0,34,327	0/1:12,16:24:32.80:410,0,33	0/1:8,0:7:8.84:9,0,30	0/0:25,0:24:61.23:0,61,634	0/0:12,0:10:26.84:0,27,232	0/0:20,0:19:55.63:0,56,502	0/0:14,0:14:36.55:0,37,402	0/0:21,0:20:48.97:0,49,429	0/0:13,0:13:32.07:0,32,346	0/0:18,0:18:44.97:0,45,507	0/1:10,4:11:26.16:26,0,51	0/0:21,0:20:46.01:0,46,551	0/0:20,0:18:46.22:0,46,433	0/0:25,0:25:68.90:0,69,723	0/0:5,0:4:8.81:0,9,86	0/0:13,0:13:35.27:0,35,356	0/0:21,0:21:49.68:0,50,558	0/0:22,0:22:43.86:0,44,461	0/0:20,0:20:54.55:0,55,583	0/0:26,0:23:60.60:0,61,413	0/0:11,0:10:8.88:0,9,60	0/0:13,0:12:12.29:0,12,109
chr10	1978067	.	AG	A	409.15	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=8.043;DP=481;FS=2.367;HRun=1;HaplotypeScore=73.4095;InbreedingCoeff=0.9338;MQ=75.17;MQ0=6;MQRankSum=-7.372;QD=6.82;ReadPosRankSum=-3.646;VQSLOD=-0.5501;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,5:24:31.22:195,31,0	0/0:7,0:7:21.03:0,21,285	0/0:43,0:19:43.66:0,44,557	0/0:37,0:17:22.24:0,22,350	0/0:25,0:25:72.22:0,72,1053	0/0:19,0:19:48.16:0,48,716	0/0:18,0:18:48.11:0,48,652	1/1:15,5:17:23.51:170,24,0	1/1:2,3:5:14.93:115,15,0	0/0:32,0:32:87.25:0,87,1197	0/0:4,0:4:9.03:0,9,135	0/0:12,0:12:33.10:0,33,462	0/0:15,0:15:33.81:0,34,509	0/0:14,0:13:25.66:0,26,467	0/0:14,0:14:39.10:0,39,539	0/0:18,0:18:45.12:0,45,619	1/1:8,2:10:11.13:83,11,0	0/0:17,0:17:42.14:0,42,612	0/0:19,0:18:45.13:0,45,628	0/0:15,0:15:42.11:0,42,581	0/0:14,0:14:39.07:0,39,500	0/0:15,0:15:42.10:0,42,585	0/0:17,0:17:48.04:0,48,689	0/0:11,0:11:30.10:0,30,436	0/0:11,0:11:33.11:0,33,493	0/0:25,0:23:55.39:0,55,792	0/0:5,0:5:5.60:0,6,77	0/0:13,0:13:19.48:0,19,308
chr10	1978070	.	AG	A	406.28	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=6.328;DP=448;FS=0.000;HRun=2;HaplotypeScore=68.3369;InbreedingCoeff=0.9488;MQ=83.40;MQ0=4;MQRankSum=-6.220;QD=9.03;ReadPosRankSum=-2.651;VQSLOD=0.1822;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:15:30.21:193,30,0	0/0:6,0:6:18.06:0,18,270	0/0:39,0:21:44.94:0,45,610	0/0:37,0:21:44.18:0,44,504	0/0:25,0:25:75.25:0,75,1119	0/0:18,0:18:51.15:0,51,730	0/0:17,0:17:51.17:0,51,758	1/1:13,1:16:18.09:130,18,0	1/1:3,3:6:17.90:135,18,0	0/0:33,0:33:90.26:0,90,1307	0/0:4,0:4:12.04:0,12,178	0/0:12,0:12:36.12:0,36,535	0/0:13,0:13:39.12:0,39,563	0/0:11,0:11:33.11:0,33,494	0/0:13,0:13:39.13:0,39,584	0/0:17,0:17:51.16:0,51,739	1/1:7,1:7:13.69:105,14,0	0/0:15,0:15:39.13:0,39,584	0/0:19,0:18:44.93:0,45,624	0/0:16,0:16:45.12:0,45,629	0/0:13,0:13:39.13:0,39,584	0/0:14,0:14:42.14:0,42,627	0/0:18,0:18:51.16:0,51,742	0/0:11,0:11:27.09:0,27,399	0/0:11,0:11:33.11:0,33,494	0/0:20,0:20:57.19:0,57,834	0/0:5,0:5:6.02:0,6,90	0/0:12,0:12:21.07:0,21,298
chr10	1980417	.	C	CT	1293.92	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-6.953;DP=290;FS=5.346;HRun=10;HaplotypeScore=30.8795;InbreedingCoeff=0.6433;MQ=68.66;MQ0=2;MQRankSum=-1.740;QD=17.03;ReadPosRankSum=0.517;VQSLOD=3.3421;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,21:27:56.98:590,57,0	0/0:5,0:5:11.99:0,12,99	0/0:9,0:7:15.43:0,15,127	0/0:9,0:4:5.26:0,5,33	0/0:7,0:7:20.98:0,21,172	0/0:15,0:15:32.95:0,33,271	0/0:5,0:5:8.97:0,9,74	1/1:11,15:22:8.44:294,8,0	0/0:1,0:7:8.15:0,8,24	0/0:15,1:16:0.97:0,1,214	0/0:6,0:6:8.97:0,9,74	0/0:3,0:3:5.99:0,6,49	0/0:4,0:4:5.99:0,6,49	0/0:6,0:6:11.97:0,12,98	0/0:7,0:7:17.97:0,18,148	0/0:4,0:4:8.99:0,9,74	1/1:5,18:23:51.13:544,51,0	0/0:13,0:13:26.94:0,27,221	0/0:19,0:19:46.76:0,47,375	0/0:8,0:8:20.97:0,21,172	0/0:2,0:2:2.98:0,3,25	0/0:10,0:10:17.96:0,18,148	0/0:7,0:7:12.86:0,13,97	0/0:5,0:5:5.98:0,6,49	0/0:8,0:8:11.98:0,12,99	0/0:9,0:8:23.97:0,24,197	0/0:16,0:16:35.94:0,36,295	0/0:14,0:14:35.33:0,35,279
chr10	1981253	.	G	GTTT	2510.90	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=9.187;DP=526;FS=3.538;HRun=10;HaplotypeScore=96.7542;InbreedingCoeff=0.9787;MQ=66.42;MQ0=5;MQRankSum=-7.814;QD=23.47;ReadPosRankSum=-1.002;VQSLOD=2.2912;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,16:20:42.08:699,42,0	0/0:6,0:6:15.04:0,15,182	0/0:25,0:20:28.64:0,29,333	0/0:16,0:7:15.05:0,15,179	0/0:19,0:19:44.92:0,45,524	0/0:14,0:14:33.06:0,33,394	0/0:16,0:16:41.98:0,42,490	0/0:39,0:40:81.12:0,81,976	1/1:18,0:21:41.28:515,41,0	0/0:21,0:21:54.14:0,54,657	0/0:35,0:35:90.17:0,90,1083	0/0:22,0:22:60.16:0,60,729	0/0:7,0:8:19.42:0,19,252	0/0:14,0:14:30.05:0,30,365	0/0:15,0:15:45.13:0,45,535	0/0:19,0:19:45.08:0,45,547	1/1:8,4:11:24.08:448,24,0	0/0:16,0:16:42.12:0,42,511	0/0:22,0:26:45.88:0,46,550	0/0:27,0:28:79.32:0,79,903	0/0:5,0:5:12.04:0,12,146	0/0:13,0:13:24:0,24,278	0/0:25,0:27:70.69:0,71,834	0/0:15,0:17:35.86:0,36,384	0/0:16,0:16:43.01:0,43,513	1/1:10,0:22:14.30:339,14,0	1/1:12,0:20:59.84:527,60,0	1/1:7,0:10:16.23:169,16,0
chr10	1981286	.	TG	T	192.71	PASS	AB=1.000;AC=4;AF=0.071;AN=56;BaseQRankSum=10.355;DP=502;FS=2.113;HRun=1;HaplotypeScore=80.3911;InbreedingCoeff=0.4278;MQ=55.46;MQ0=11;MQRankSum=-9.238;QD=4.10;ReadPosRankSum=2.388;VQSLOD=0.5963;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,1:21:39.05:0,39,373	0/0:6,0:6:18.06:0,18,247	0/0:25,0:10:14.17:0,14,222	0/0:20,0:6:10.24:0,10,114	0/0:20,0:20:59.93:0,60,707	0/0:12,0:12:36.10:0,36,483	0/0:13,0:13:37.30:0,37,477	0/0:27,0:25:45.42:0,45,690	0/0:16,0:16:16.97:0,17,172	0/0:25,0:25:72.22:0,72,976	0/0:39,0:39:99:0,108,1420	0/0:20,0:20:51.15:0,51,710	0/0:8,0:8:24.08:0,24,331	0/0:11,0:11:33.08:0,33,423	0/0:14,0:14:39.13:0,39,540	0/0:14,0:14:41.34:0,41,531	0/0:14,1:15:22.57:0,23,200	0/0:14,0:14:41.98:0,42,523	0/0:32,0:32:93.13:0,93,1184	0/0:23,0:23:68.81:0,69,881	0/0:5,0:5:15.05:0,15,209	0/0:15,0:15:45.10:0,45,573	0/0:22,0:22:66.16:0,66,849	0/0:16,1:17:25.54:0,26,583	0/0:21,0:21:63.04:0,63,809	0/1:18,0:16:20.51:129,0,21	1/1:19,1:20:8.98:160,9,0	0/1:9,0:8:4.56:5,0,41
chr10	1981287	.	GT	G	661.81	PASS	AB=0.833;AC=6;AF=0.107;AN=56;BaseQRankSum=9.526;DP=501;FS=5.159;HRun=5;HaplotypeScore=78.5233;InbreedingCoeff=0.7367;MQ=55.29;MQ0=13;MQRankSum=-8.632;QD=10.03;ReadPosRankSum=2.331;VQSLOD=0.8437;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:41.74:0,42,445	0/0:6,0:6:18.06:0,18,246	0/0:25,0:10:18.03:0,18,215	0/1:19,0:6:1.78:2,0,44	0/0:20,0:20:54.11:0,54,685	0/0:12,0:12:33.11:0,33,451	0/0:13,0:13:39.12:0,39,512	0/0:27,0:25:50.44:0,50,566	0/0:16,0:16:27.53:0,28,242	0/0:24,0:24:69.21:0,69,915	0/0:38,0:38:99:0,99,1337	0/0:19,0:19:51.15:0,51,696	0/0:8,0:8:24.06:0,24,311	0/0:11,0:11:33.11:0,33,450	0/0:14,0:14:39.13:0,39,533	0/0:14,0:14:42.13:0,42,561	0/0:16,0:16:27.05:0,27,249	0/0:14,0:13:36.06:0,36,448	0/0:32,0:31:78.24:0,78,1021	0/0:24,0:24:63.20:0,63,842	0/0:5,0:5:15.05:0,15,205	0/0:16,0:16:45.14:0,45,598	0/0:22,0:22:60.20:0,60,819	0/0:17,0:17:35.78:0,36,603	0/0:21,0:21:63.21:0,63,853	0/1:9,9:16:2.81:317,0,3	1/1:14,6:20:27.29:382,27,0	1/1:6,3:8:11.31:87,11,0
chr10	1981293	.	GTTTTTGTTT	G	2023.04	PASS	AB=0.964;AC=9;AF=0.161;AN=56;BaseQRankSum=7.995;DP=497;FS=9.669;HRun=0;HaplotypeScore=145.1164;InbreedingCoeff=0.3659;MQ=55.29;MQ0=14;MQRankSum=-7.417;QD=15.93;ReadPosRankSum=-0.376;VQSLOD=2.0541;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:20,0:20:14.38:14,0,374	0/0:7,0:7:21.07:0,21,738	0/0:22,0:7:12.04:0,12,216	0/1:17,0:7:12.87:13,0,20	0/0:17,0:17:51.17:0,51,1634	0/0:11,0:11:30.10:0,30,1018	0/0:14,0:14:39.11:0,39,1350	0/1:24,0:22:99:106,0,183	0/0:19,0:20:21.27:0,21,230	0/0:23,0:23:63.21:0,63,2368	0/0:38,0:38:90.24:0,90,2957	0/0:19,0:19:45.14:0,45,1552	0/0:9,0:9:27.09:0,27,920	0/0:12,0:12:36.12:0,36,1196	0/0:16,0:16:45.13:0,45,1680	0/0:14,0:14:40.67:0,41,1242	0/1:17,0:17:0.39:0,0,182	0/0:14,0:12:29.77:0,30,911	0/0:27,0:26:63.21:0,63,2128	0/0:23,0:23:57.18:0,57,2227	0/0:5,0:5:12.04:0,12,525	0/0:19,0:19:54.17:0,54,1846	0/0:20,0:20:57.18:0,57,2191	0/0:18,0:18:49.05:0,49,1537	0/0:22,0:22:66.21:0,66,2177	0/1:14,3:15:44.16:579,0,44	1/1:12,4:24:43.48:1127,43,0	1/1:3,3:6:15.02:329,15,0
chr10	1981294	.	TTTTTG	T	1581.48	PASS	AB=0.941;AC=12;AF=0.214;AN=56;BaseQRankSum=10.147;DP=499;FS=3.530;HRun=0;HaplotypeScore=109.0846;InbreedingCoeff=0.4298;MQ=53.99;MQ0=17;MQRankSum=-8.621;QD=9.76;ReadPosRankSum=-1.399;VQSLOD=2.2805;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:20,0:20:81.38:180,0,81	0/0:7,0:7:21.05:0,21,464	0/0:21,0:7:11.89:0,12,168	0/1:16,0:5:1.26:1,0,5	0/0:17,0:17:51.05:0,51,928	0/0:11,0:11:30.08:0,30,664	0/0:14,0:14:39.06:0,39,851	1/1:24,0:22:22.65:255,23,0	0/1:9,11:20:20.93:363,0,21	0/0:23,0:23:65.82:0,66,1420	0/0:35,0:35:79.69:0,80,1760	0/0:19,0:19:48.08:0,48,1020	0/0:9,0:9:27.05:0,27,552	0/0:12,0:12:35.95:0,36,689	0/0:17,0:17:45.07:0,45,996	0/0:14,0:14:40.55:0,41,818	0/1:17,0:17:42.18:128,0,42	0/1:14,0:12:0.39:0,0,499	0/0:29,0:27:66.11:0,66,1302	0/0:24,0:24:60.09:0,60,1362	0/0:5,0:5:12.04:0,12,319	0/0:19,0:19:54.04:0,54,1062	0/0:20,0:20:57.15:0,57,1355	0/0:18,0:18:28.62:0,29,853	0/0:22,0:22:66.11:0,66,1358	0/1:18,0:15:37.45:217,0,37	1/1:25,0:24:17.01:435,17,0	1/1:8,0:7:15.48:160,15,0
chr10	1981298	.	TG	T	1014.49	PASS	AB=0.974;AC=12;AF=0.214;AN=56;BaseQRankSum=11.037;DP=491;FS=10.898;HRun=1;HaplotypeScore=73.4455;InbreedingCoeff=0.6330;MQ=52.08;MQ0=18;MQRankSum=-10.355;QD=7.99;ReadPosRankSum=-1.443;VQSLOD=-0.5788;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:19,0:19:99:139,0,190	0/0:7,0:7:21.05:0,21,238	0/0:19,0:4:5.04:0,5,68	0/0:11,0:3:1.21:0,1,10	0/0:18,0:18:49.74:0,50,562	0/0:11,0:11:33.06:0,33,357	0/0:15,0:15:36.80:0,37,433	1/1:20,2:20:51.64:431,52,0	1/1:17,2:19:1.80:113,2,0	0/0:26,0:25:69.95:0,70,738	0/0:32,0:32:74.19:0,74,807	0/0:19,0:19:51.02:0,51,519	0/0:10,0:10:29.26:0,29,296	0/0:14,0:14:23.58:0,24,377	0/0:18,0:18:44.78:0,45,479	0/0:14,0:14:40.28:0,40,395	0/1:17,1:18:69.01:69,0,121	0/0:13,0:11:25.62:0,26,272	0/0:28,0:25:66.71:0,67,709	0/0:23,0:23:40.72:0,41,564	0/0:5,0:5:15.03:0,15,166	0/0:20,0:20:57.15:0,57,656	0/0:21,0:21:59.62:0,60,594	0/0:18,0:18:50.12:0,50,505	0/0:22,0:22:65.92:0,66,696	1/1:17,0:14:2.90:144,3,0	1/1:26,0:25:17.25:197,17,0	1/1:6,0:6:16.76:84,17,0
chr10	1981302	.	T	TTG	374.96	PASS	AB=0.941;AC=5;AF=0.089;AN=56;BaseQRankSum=6.539;DP=487;FS=3.783;HRun=0;HaplotypeScore=85.5161;InbreedingCoeff=0.6958;MQ=51.68;MQ0=19;MQRankSum=-5.531;QD=7.81;ReadPosRankSum=2.768;VQSLOD=3.2603;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:44.62:0,45,496	0/0:7,0:7:21.06:0,21,284	0/0:21,0:4:11.62:0,12,96	0/0:12,0:3:4.82:0,5,33	0/0:18,0:18:48.15:0,48,711	0/0:11,0:11:33.08:0,33,438	0/0:15,0:15:45.07:0,45,618	0/0:20,0:18:19.22:0,19,282	0/0:18,0:18:28.97:0,29,214	0/0:26,0:25:74.52:0,75,979	0/0:31,0:31:86.11:0,86,1038	0/0:19,0:19:43.38:0,43,598	0/0:12,0:12:33.08:0,33,445	0/0:14,0:14:42.06:0,42,552	0/0:17,0:17:44.77:0,45,599	0/0:14,0:14:42.04:0,42,499	0/0:17,0:17:33.92:0,34,402	0/0:12,0:10:29.73:0,30,376	0/0:28,0:24:69.15:0,69,953	0/0:22,0:22:59.43:0,59,755	0/0:5,0:5:15.05:0,15,229	0/0:20,0:20:57.19:0,57,853	0/0:20,0:20:59.52:0,60,807	0/0:19,0:19:47.81:0,48,649	0/0:23,0:23:68.83:0,69,882	0/1:15,1:13:20.51:121,0,21	1/1:20,6:25:13.44:269,13,0	1/1:6,0:6:12.46:107,12,0
chr10	1982695	.	CTTA	C	4334.80	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=12.182;DP=491;FS=3.180;HRun=0;HaplotypeScore=68.6033;InbreedingCoeff=0.9517;MQ=61.64;MQ0=1;MQRankSum=-4.752;QD=39.05;ReadPosRankSum=-0.919;VQSLOD=4.9570;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,22:24:57.19:928,57,0	0/0:5,0:5:15.05:0,15,335	0/0:19,0:14:42.14:0,42,875	0/0:8,0:7:14.38:0,14,242	0/0:16,0:16:42.14:0,42,915	0/0:23,0:23:66.23:0,66,1467	0/0:8,0:8:24.06:0,24,488	1/1:3,35:38:99:1604,102,0	1/1:1,19:20:51.17:832,51,0	0/0:19,0:19:54.19:0,54,1204	0/0:20,0:20:54.19:0,54,1205	0/0:12,0:12:36.12:0,36,804	0/0:18,0:18:51.18:0,51,1137	0/0:19,0:19:54.19:0,54,1176	0/0:14,0:14:42.14:0,42,938	0/0:20,0:20:57.20:0,57,1266	1/1:2,27:29:12.69:970,13,0	0/0:27,0:27:31.39:0,31,1472	0/0:20,0:20:54.19:0,54,1206	0/0:18,0:18:54.19:0,54,1202	0/0:18,0:18:51.17:0,51,1068	0/0:4,0:4:6.02:0,6,134	0/0:21,0:21:60.21:0,60,1325	0/0:12,0:12:27.09:0,27,577	0/0:16,0:16:42.14:0,42,935	0/0:23,0:23:69.24:0,69,1542	0/0:14,0:14:33.09:0,33,627	0/0:6,0:6:18.06:0,18,378
chr10	1983433	.	AAAAT	A	2993.14	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=8.338;DP=476;FS=1.065;HRun=0;HaplotypeScore=82.8809;InbreedingCoeff=0.9567;MQ=65.82;MQ0=0;MQRankSum=-3.229;QD=33.63;ReadPosRankSum=2.519;VQSLOD=3.7452;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,38:37:87.29:1459,87,0	0/0:10,0:10:21.07:0,21,503	0/0:13,0:12:17.99:0,18,374	0/0:8,0:8:20.10:0,20,434	0/0:19,0:19:51.18:0,51,1247	0/0:17,0:17:45.14:0,45,1103	0/0:9,0:9:27.09:0,27,689	1/1:5,11:15:30.06:475,30,0	1/1:2,13:15:30.10:530,30,0	0/0:29,0:29:81.28:0,81,2061	0/0:17,0:17:51.18:0,51,1280	0/0:9,0:9:21.07:0,21,511	0/0:19,0:19:45.15:0,45,1130	0/0:12,0:12:27.09:0,27,690	0/0:15,0:15:39.13:0,39,975	0/0:16,0:16:39.12:0,39,950	1/1:6,14:20:39.13:689,39,0	0/0:22,0:22:57.20:0,57,1417	0/0:23,0:23:63.22:0,63,1595	0/0:27,0:27:72.25:0,72,1842	0/0:18,0:18:51.17:0,51,1243	0/0:4,0:4:6.02:0,6,151	0/0:17,0:17:51.18:0,51,1218	0/0:5,0:5:12.04:0,12,254	0/0:21,0:21:57.20:0,57,1461	0/0:17,0:17:42.14:0,42,1041	0/0:24,0:24:66.21:0,66,1581	0/0:16,0:16:48.13:0,48,1176
chr10	1984596	.	AC	A	5479.37	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=11.571;DP=695;FS=10.157;HRun=1;HaplotypeScore=76.4142;InbreedingCoeff=0.9977;MQ=90.47;MQ0=0;MQRankSum=-1.623;QD=39.42;ReadPosRankSum=0.332;VQSLOD=4.8137;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,45:45:99:1720,123,0	0/0:6,0:6:18.06:0,18,287	0/0:28,0:28:81.10:0,81,1215	0/0:31,0:31:90.30:0,90,1389	0/0:22,0:22:66.21:0,66,1028	0/0:20,0:20:60.20:0,60,941	0/0:23,0:23:69.20:0,69,1055	1/1:0,32:32:96.31:1327,96,0	1/1:0,33:33:93.31:1300,93,0	0/0:28,0:28:81.20:0,81,1222	0/0:21,0:21:60.20:0,60,958	0/0:23,0:23:69.15:0,69,1045	0/0:27,0:27:81.23:0,81,1261	0/0:16,0:16:48.16:0,48,764	0/0:29,0:29:84.25:0,84,1290	0/0:27,0:27:81.26:0,81,1268	1/1:0,29:28:81.27:1133,81,0	0/0:23,0:23:66.19:0,66,1027	0/0:29,0:29:87.28:0,87,1343	0/0:25,0:25:75.24:0,75,1160	0/0:30,0:30:90.31:0,90,1435	0/0:18,0:18:51.17:0,51,814	0/0:15,0:15:45.12:0,45,672	0/0:27,0:27:81.28:0,81,1294	0/0:16,0:16:48.16:0,48,744	0/0:26,0:26:75.23:0,75,1152	0/0:29,0:29:84.10:0,84,1231	0/0:17,0:17:51.16:0,51,779
chr10	1984797	.	TTTTTTTTTCTTTTTCTTTTTC	T	1148.14	PASS	AB=1.000;AC=10;AF=0.179;AN=56;BaseQRankSum=1.768;DP=451;FS=53.650;HRun=0;HaplotypeScore=224.4314;InbreedingCoeff=0.4845;MQ=60.06;MQ0=9;MQRankSum=-2.353;QD=11.60;ReadPosRankSum=0.487;VQSLOD=1.1091;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:17,0:17:86.39:92,0,86	0/0:8,0:8:24.05:0,24,1102	0/0:16,0:5:11.67:0,12,118	0/0:16,0:8:8.86:0,9,250	0/0:22,0:22:38.14:0,38,3387	0/0:13,0:13:33.41:0,33,1464	0/0:18,0:17:35.60:0,36,2602	0/1:21,0:20:56.78:57,0,553	0/1:10,0:10:13.17:13,0,304	0/0:23,0:23:65.88:0,66,4142	0/0:23,0:23:44.97:0,45,3126	0/0:12,0:12:27.02:0,27,1246	0/0:15,0:15:36.09:0,36,2233	0/0:11,0:10:27.07:0,27,1570	0/0:17,0:16:48.15:0,48,2561	0/0:18,0:18:45.04:0,45,2692	0/1:15,0:14:41.40:41,0,59	0/0:12,0:12:30.01:0,30,1846	0/0:25,0:25:53.11:0,53,1792	0/0:21,0:21:54.12:0,54,3533	0/0:13,0:13:23.75:0,24,902	0/0:10,0:9:27.08:0,27,1395	0/0:19,0:19:45.02:0,45,2850	0/0:13,0:13:25.26:0,25,1393	0/0:27,0:26:72.22:0,72,4317	1/1:11,0:11:24.06:348,24,0	1/1:14,0:13:14.12:186,14,0	1/1:4,7:10:12.04:569,12,0
chr10	1984810	.	TTC	T	738.93	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=9.204;DP=464;FS=0.514;HRun=0;HaplotypeScore=72.9620;InbreedingCoeff=0.6840;MQ=48.75;MQ0=22;MQRankSum=-7.559;QD=5.60;ReadPosRankSum=-5.622;VQSLOD=0.7694;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:19:22.85:173,23,0	0/0:7,0:6:18.06:0,18,303	0/1:15,0:4:10.06:24,0,10	0/0:12,0:3:5.93:0,6,70	0/0:26,0:25:52.14:0,52,978	0/0:9,0:8:21.20:0,21,268	0/0:17,0:16:2.60:0,3,518	1/1:34,0:30:15.42:276,15,0	0/1:13,0:12:3.01:66,0,3	0/0:27,0:27:63.26:0,63,1219	0/0:22,0:22:53.91:0,54,805	0/0:15,0:15:25.62:0,26,384	0/0:17,0:17:47.80:0,48,643	0/0:11,0:10:26.66:0,27,381	0/0:19,0:18:41.96:0,42,671	0/0:16,0:15:45.04:0,45,675	1/1:19,0:16:17.12:123,17,0	0/0:15,0:14:36:0,36,540	0/0:20,0:17:29.33:0,29,651	0/0:21,0:21:38.63:0,39,794	0/0:6,0:6:18.05:0,18,287	0/0:10,0:9:26.80:0,27,344	0/0:17,0:17:45:0,45,690	0/0:14,0:14:25.61:0,26,360	0/0:31,0:30:80.70:0,81,1110	1/1:4,4:8:14.01:81,14,0	1/1:10,2:11:14.64:128,15,0	0/1:12,0:11:28.25:46,0,28
chr10	1987411	.	TTATATATA	T	639.29	PASS	AC=6;AF=0.300;AN=20;BaseQRankSum=0.197;DP=92;FS=11.974;HRun=0;HaplotypeScore=33.6932;InbreedingCoeff=0.4352;MQ=70.65;MQ0=3;MQRankSum=-2.364;QD=27.80;ReadPosRankSum=1.051;VQSLOD=1.3755;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,2:6:6.02:153,6,0	./.	./.	0/0:22,0:9:0.36:0,0,19	./.	0/0:1,0:1:3.01:0,3,122	./.	0/0:9,0:8:3.01:0,3,90	./.	0/0:2,0:2:3.01:0,3,123	./.	./.	./.	./.	./.	./.	1/1:7,7:15:21.07:514,21,0	0/0:7,0:11:15.05:0,15,395	0/0:5,0:5:3.01:0,3,70	./.	./.	./.	./.	./.	./.	./.	1/1:2,0:2:3.01:65,3,0	0/0:2,0:2:1.82:0,2,5
chr10	1987744	.	CAGTA	C	1677.60	PASS	AB=0.522;AC=5;AF=0.089;AN=56;BaseQRankSum=8.089;DP=617;FS=3.086;HRun=0;HaplotypeScore=107.3547;InbreedingCoeff=0.7059;MQ=82.07;MQ0=0;MQRankSum=-3.465;QD=41.94;ReadPosRankSum=1.587;VQSLOD=4.2119;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:56:99:0,148,4040	0/0:3,0:3:6.02:0,6,158	0/0:13,0:13:35.46:0,35,806	0/0:22,0:22:50.84:0,51,1144	0/0:9,0:9:24.08:0,24,568	0/0:20,0:20:60.21:0,60,1493	0/0:32,0:32:93.32:0,93,2415	0/0:31,0:31:90.29:0,90,2245	0/0:33,0:33:90.31:0,90,2367	0/0:24,0:24:69.24:0,69,1797	0/0:10,0:10:30.10:0,30,760	0/0:25,0:25:69.22:0,69,1736	0/0:31,0:31:90.29:0,90,2319	0/0:26,0:26:78.24:0,78,1805	0/0:30,0:30:84.29:0,84,2213	0/0:16,0:16:45.15:0,45,1188	0/0:35,0:35:93.28:0,93,2301	0/0:18,0:18:48.15:0,48,1184	0/0:11,0:11:33.10:0,33,763	0/0:4,0:4:12.04:0,12,311	0/0:60,0:60:99:0,160,4107	0/0:14,0:14:39.13:0,39,999	0/0:14,0:14:33.11:0,33,839	0/0:29,0:29:72.24:0,72,1811	0/0:11,0:11:30.09:0,30,738	0/1:2,22:24:10.02:1136,0,10	1/1:0,11:11:30.10:552,30,0	1/1:0,5:5:6.02:110,6,0
chr10	1988911	.	A	ATCTGGGGGACAGAAAACAAGC	16829.76	PASS	AB=0.806;AC=54;AF=0.964;AN=56;BaseQRankSum=-0.991;DP=155;FS=13.088;HRun=0;HaplotypeScore=127.8117;InbreedingCoeff=-0.0109;MQ=96.86;MQ0=0;MQRankSum=-2.248;QD=108.58;ReadPosRankSum=2.058;VQSLOD=3.5811;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,0:10:6:233,6,0	1/1:3,0:3:9.03:590,9,0	0/1:9,0:9:24.30:670,0,24	0/1:4,1:11:14.58:1389,0,15	1/1:5,0:5:6.02:320,6,0	1/1:6,0:6:15.05:934,15,0	1/1:7,0:7:18.06:917,18,0	1/1:5,0:5:9.03:609,9,0	1/1:7,0:7:15.05:682,15,0	1/1:6,0:6:15.03:472,15,0	1/1:5,0:5:0.47:1,0,0	1/1:4,0:4:9.03:574,9,0	1/1:6,0:6:12.04:479,12,0	1/1:6,0:6:15.94:1039,16,0	1/1:7,0:7:12.04:952,12,0	1/1:9,0:9:27.09:1540,27,0	1/1:7,0:7:15.05:1240,15,0	1/1:5,0:5:6.02:435,6,0	1/1:3,0:3:9.03:624,9,0	1/1:5,0:5:12.04:492,12,0	1/1:6,0:6:4.84:62,5,0	1/1:2,0:2:3.01:283,3,0	1/1:2,0:2:6.02:248,6,0	1/1:6,0:6:12.04:620,12,0	1/1:4,0:4:6.02:347,6,0	1/1:3,0:3:6.02:400,6,0	1/1:5,0:5:12.04:627,12,0	1/1:1,0:1:3.01:50,3,0
chr10	1988912	.	T	TCTGGGGGACAGAAAACAAGCCA	16676.08	PASS	AB=0.692;AC=54;AF=0.964;AN=56;BaseQRankSum=-0.892;DP=137;FS=15.611;HRun=0;HaplotypeScore=116.0665;InbreedingCoeff=-0.0067;MQ=78.78;MQ0=0;MQRankSum=-2.638;QD=121.72;ReadPosRankSum=1.951;VQSLOD=3.9395;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,0:9:6:233,6,0	1/1:3,0:3:9.03:645,9,0	0/1:2,1:7:24.30:717,0,24	0/1:3,0:4:32.65:164,0,33	1/1:3,0:3:6.02:320,6,0	1/1:6,0:6:15.05:1033,15,0	1/1:7,0:7:21.05:1005,21,0	1/1:5,0:5:9.03:688,9,0	1/1:7,0:7:15.05:707,15,0	1/1:5,0:5:15.03:472,15,0	1/1:5,0:5:0.47:1,0,0	1/1:4,0:4:9.03:636,9,0	1/1:6,0:6:12.04:502,12,0	1/1:6,0:6:18.05:1153,18,0	1/1:7,0:7:12.04:986,12,0	1/1:9,0:9:27.09:1719,27,0	1/1:7,0:7:15.05:1261,15,0	1/1:4,0:4:6.02:461,6,0	1/1:3,0:3:9.03:659,9,0	1/1:4,0:4:12.04:520,12,0	1/1:6,0:6:9.86:103,10,0	1/1:1,0:1:3.01:280,3,0	1/1:2,0:2:6.02:248,6,0	1/1:6,0:6:12.04:653,12,0	1/1:2,0:2:6.02:347,6,0	1/1:3,0:3:6.02:400,6,0	1/1:5,0:5:12.04:712,12,0	1/1:1,0:1:3.01:50,3,0
chr10	1993939	.	A	AGTT	3947.33	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=9.626;DP=661;FS=3.449;HRun=0;HaplotypeScore=112.8390;InbreedingCoeff=0.9045;MQ=82.02;MQ0=0;MQRankSum=-12.383;QD=25.30;ReadPosRankSum=0.202;VQSLOD=3.7820;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:36,0:36:1.06:480,0,1	0/0:14,0:14:36.12:0,36,571	0/0:24,0:24:56.97:0,57,819	0/0:18,0:18:45.15:0,45,690	0/0:30,0:30:72.24:0,72,1117	0/0:28,0:28:78.27:0,78,1230	0/0:15,0:15:42.14:0,42,663	1/1:4,22:26:66.23:1424,66,0	1/1:15,0:15:12.04:199,12,0	0/0:28,0:28:75.25:0,75,1164	0/0:16,0:16:48.16:0,48,761	0/0:28,0:28:75.26:0,75,1187	0/0:21,0:21:54.18:0,54,852	0/0:24,0:24:66.23:0,66,1044	0/0:27,0:27:75.26:0,75,1185	0/0:32,0:32:96.30:0,96,1472	1/1:20,0:20:4.26:53,4,0	0/0:10,0:10:24.08:0,24,380	0/0:38,0:38:99:0,99,1568	0/0:30,0:30:78.25:0,78,1211	0/0:29,0:29:81.27:0,81,1258	0/0:15,0:15:39.12:0,39,596	0/0:26,0:26:66.20:0,66,1002	0/0:24,0:23:57.15:0,57,873	0/0:28,0:28:57.19:0,57,904	1/1:21,1:22:54.18:953,54,0	1/1:26,0:27:39.13:639,39,0	1/1:10,0:10:12.04:199,12,0
chr10	1993945	.	T	TGTTTCTAAAATAAA	22394.47	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-3.137;DP=689;FS=3.614;HRun=0;HaplotypeScore=231.1503;InbreedingCoeff=0.9886;MQ=79.51;MQ0=0;MQRankSum=-16.583;QD=111.42;ReadPosRankSum=-0.603;VQSLOD=4.5533;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,25:47:66.23:3974,66,0	0/0:12,0:12:36.12:0,36,1507	0/0:23,0:23:69.18:0,69,2126	0/0:18,0:18:51.17:0,51,1529	0/0:29,0:29:84.28:0,84,3028	0/0:27,0:27:81.28:0,81,3120	0/0:17,0:17:48.16:0,48,1599	1/1:42,0:42:99:4897,120,0	1/1:5,9:17:27.09:1729,27,0	0/0:28,0:28:78.27:0,78,3094	0/0:18,0:18:54.18:0,54,1971	0/0:29,0:29:84.29:0,84,3391	0/0:21,0:21:63.19:0,63,2336	0/0:24,0:24:72.25:0,72,2731	0/0:26,0:26:78.27:0,78,2960	0/0:32,0:32:96.33:0,96,3740	1/1:3,16:20:9.03:348,9,0	0/0:8,0:8:24.08:0,24,977	0/0:35,0:35:99:0,105,3307	0/0:27,0:27:81.26:0,81,3077	0/0:30,0:30:90.30:0,90,3454	0/0:16,0:16:48.16:0,48,1758	0/0:26,0:26:75.25:0,75,2897	0/0:21,0:20:63.22:0,63,2443	0/0:21,0:21:63.19:0,63,2560	1/1:5,17:23:69.24:4651,69,0	1/1:14,18:39:81.28:4929,81,0	1/1:5,4:13:27.09:1867,27,0
chr10	2135049	.	AGT	A	1222.75	PASS	AB=0.890;AC=20;AF=0.417;AN=48;BaseQRankSum=4.884;DP=614;FS=5.056;HRun=0;HaplotypeScore=70.4355;InbreedingCoeff=0.0600;MQ=31.67;MQ0=238;MQRankSum=-0.198;QD=3.34;ReadPosRankSum=2.573;VQSLOD=1.4467;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:12,17:23:11.84:112,12,0	0/0:8,0:6:9.03:0,9,134	./.	./.	0/0:23,0:12:15.05:0,15,220	0/0:18,0:11:12.04:0,12,175	./.	./.	0/0:24,0:19:26.96:0,27,349	0/0:28,0:14:20.96:0,21,246	0/1:16,1:7:0.90:1,0,73	0/1:21,3:15:6.82:7,0,94	0/1:22,0:9:14.67:15,0,39	0/0:11,0:8:3.95:0,4,195	0/1:16,3:11:14.55:15,0,196	1/1:12,0:4:2.84:14,3,0	0/1:14,0:24:33.45:43,0,33	0/1:19,3:15:47.20:47,0,140	0/0:12,0:1:2.99:0,3,24	0/0:11,0:6:8.98:0,9,91	0/1:29,3:22:66.87:67,0,417	0/1:15,1:7:26.61:27,0,31	0/0:15,0:6:3.01:0,3,45	0/1:30,3:27:76.43:76,0,300	0/1:19,1:18:30.75:31,0,274	1/1:25,16:30:35.88:349,36,0	1/1:15,10:23:20.89:210,21,0	1/1:7,12:18:38.60:368,39,0
chr10	2161857	.	AGAG	A	2023.87	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=8.173;DP=617;FS=3.231;HRun=0;HaplotypeScore=88.4673;InbreedingCoeff=0.9366;MQ=52.48;MQ0=11;MQRankSum=1.449;QD=23.53;ReadPosRankSum=-1.063;VQSLOD=3.2670;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:24:33.89:0,34,670	0/0:7,0:7:18.06:0,18,366	0/0:23,0:7:9.03:0,9,183	0/0:9,0:7:6.02:0,6,92	0/0:19,0:19:39.11:0,39,714	0/0:23,0:23:42.14:0,42,842	0/0:17,0:16:30.05:0,30,556	1/1:8,12:17:30.03:342,30,0	0/0:21,0:19:45.15:0,45,876	0/0:33,0:33:78.25:0,78,1481	0/0:24,0:23:57.14:0,57,1043	0/0:32,0:32:63.20:0,63,1179	0/0:30,0:29:60.15:0,60,1113	0/0:19,0:19:45.14:0,45,815	0/0:31,0:31:78.25:0,78,1479	0/0:26,0:26:69.22:0,69,1286	0/0:15,0:14:24.08:0,24,467	0/0:25,0:25:60.21:0,60,1219	0/0:21,0:20:41.48:0,41,701	0/0:20,0:19:51.14:0,51,949	0/0:17,0:17:42.13:0,42,794	0/0:15,0:15:36.12:0,36,725	0/0:23,0:23:63.21:0,63,1223	0/0:25,0:24:51.18:0,51,1026	0/0:27,0:27:78.26:0,78,1517	1/1:7,24:32:75.02:931,75,0	1/1:5,21:26:54.18:777,54,0	1/1:2,6:8:9.03:129,9,0
chr10	2162432	.	G	GT	592.21	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-4.170;DP=790;FS=5.925;HRun=6;HaplotypeScore=71.2336;InbreedingCoeff=0.9946;MQ=58.66;MQ0=36;MQRankSum=1.629;QD=24.68;ReadPosRankSum=1.473;VQSLOD=3.7312;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:64,0:64:99:0,180,1786	0/0:11,0:11:30.06:0,30,305	0/0:53,0:21:53.09:0,53,543	0/0:36,0:18:49.81:0,50,496	0/0:24,0:24:56.68:0,57,545	0/0:25,0:25:72.14:0,72,726	0/0:34,0:34:75.15:0,75,764	0/0:27,0:21:57.07:0,57,563	0/0:21,0:20:51.11:0,51,520	0/0:29,0:28:72.16:0,72,730	0/0:12,0:12:33.07:0,33,335	0/0:32,0:32:75.11:0,75,752	0/0:24,0:24:60.13:0,60,611	0/0:25,0:25:63.14:0,63,642	0/0:36,0:36:99:0,102,1034	0/0:31,0:31:81.18:0,81,825	1/1:1,23:24:29.77:687,30,0	0/0:38,0:38:99:0,105,1060	0/0:27,0:20:48.06:0,48,470	0/0:24,0:24:62.70:0,63,633	0/0:42,0:41:99:0,108,1085	0/0:19,0:18:48.11:0,48,489	0/0:33,0:33:84.11:0,84,841	0/0:30,0:29:78.17:0,78,795	0/0:21,0:21:51.09:0,51,512	0/0:26,0:26:78.18:0,78,795	0/0:14,0:14:39.04:0,39,385	0/0:8,0:8:21.05:0,21,212
chr10	2164445	.	G	GAC	5255.80	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-10.134;DP=592;FS=4.164;HRun=0;HaplotypeScore=64.8200;InbreedingCoeff=0.8552;MQ=55.79;MQ0=5;MQRankSum=-2.843;QD=34.58;ReadPosRankSum=-1.666;VQSLOD=6.2193;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,24:31:0.38:1048,0,0	0/0:11,0:11:27.09:0,27,337	0/0:19,0:6:14.99:0,15,167	0/0:23,0:15:33.09:0,33,396	0/0:29,0:29:81.26:0,81,1009	0/0:22,0:22:57.18:0,57,710	0/0:21,0:21:60.17:0,60,737	1/1:16,22:37:34.71:1073,35,0	1/1:4,13:17:36.12:572,36,0	0/0:22,0:22:54.17:0,54,665	0/0:16,0:16:42.11:0,42,497	0/0:13,0:13:33.11:0,33,413	0/0:20,0:20:53.98:0,54,675	0/0:13,0:13:36.10:0,36,437	0/0:24,0:24:69.22:0,69,863	0/0:18,1:19:1.63:0,2,551	0/0:31,0:31:75.24:0,75,937	0/0:23,0:23:57.16:0,57,697	0/0:18,0:15:30.08:0,30,361	0/0:22,0:22:66.20:0,66,813	0/0:19,0:19:57.18:0,57,711	0/0:19,0:19:48.12:0,48,574	0/0:24,0:24:66.21:0,66,822	0/0:16,0:16:48.14:0,48,587	0/0:16,0:16:42.13:0,42,525	1/1:6,19:25:60.20:968,60,0	1/1:3,22:25:63.22:1038,63,0	1/1:3,12:15:1.63:557,2,0
chr10	2164929	.	G	GC	2684.94	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=8.662;DP=604;FS=0.945;HRun=6;HaplotypeScore=69.5999;InbreedingCoeff=0.8980;MQ=63.28;MQ0=7;MQRankSum=3.622;QD=23.35;ReadPosRankSum=1.848;VQSLOD=3.0412;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,36:45:90.29:1131,90,0	0/0:5,0:5:15.03:0,15,153	0/0:16,0:13:17.03:0,17,146	0/1:17,0:11:0.61:1,0,30	0/0:16,0:16:45.09:0,45,453	0/0:21,0:21:57.09:0,57,564	0/0:22,0:22:57.09:0,57,570	0/0:25,0:18:45.07:0,45,445	1/1:0,29:29:81.26:1019,81,0	0/0:29,0:29:84.17:0,84,846	0/0:21,0:21:59.93:0,60,581	0/0:24,0:24:57.11:0,57,573	0/0:30,0:30:87.18:0,87,880	0/0:19,0:19:41.90:0,42,383	0/0:23,0:23:66.15:0,66,673	0/0:26,0:26:72.15:0,72,727	1/1:1,23:24:54.17:677,54,0	0/0:12,0:12:33.07:0,33,336	0/0:18,0:16:39.08:0,39,392	0/0:16,0:16:42.09:0,42,428	0/0:29,0:29:84.16:0,84,841	0/0:20,0:20:54.12:0,54,549	0/0:15,0:15:38.83:0,39,378	0/0:28,0:28:72.08:0,72,708	0/0:14,0:14:42.10:0,42,428	0/0:20,0:20:60.13:0,60,610	0/0:31,0:31:75.08:0,75,734	0/0:9,0:9:21.05:0,21,214
chr10	2169617	.	T	TA	690.69	PASS	AB=0.958;AC=7;AF=0.125;AN=56;BaseQRankSum=-4.703;DP=585;FS=7.320;HRun=9;HaplotypeScore=52.1224;InbreedingCoeff=0.6991;MQ=52.31;MQ0=27;MQRankSum=2.969;QD=11.91;ReadPosRankSum=0.152;VQSLOD=2.2748;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,2:4:5.98:53,6,0	0/0:6,0:6:9:0,9,78	0/1:21,1:12:5.11:5,0,103	0/0:11,0:3:3:0,3,26	0/0:29,0:26:68.99:0,69,599	0/0:29,0:28:74.98:0,75,651	0/0:12,0:12:35.99:0,36,313	0/0:42,0:54:99:0,133,941	1/1:3,1:4:3.01:33,3,0	0/0:31,1:29:50.78:0,51,665	0/0:23,0:23:59.98:0,60,521	0/0:18,0:18:50.99:0,51,442	0/0:25,0:24:59.99:0,60,521	0/0:16,0:16:41.99:0,42,365	0/0:27,0:28:68.02:0,68,579	0/0:28,0:28:71.97:0,72,622	1/1:2,23:25:66.18:726,66,0	0/0:23,0:22:59.99:0,60,520	0/0:19,0:18:53.99:0,54,469	0/0:33,0:33:86.98:0,87,755	0/0:6,0:6:18:0,18,156	0/0:21,0:21:59.99:0,60,521	0/0:18,1:18:17.84:0,18,383	0/0:14,0:14:41.99:0,42,364	0/0:26,0:26:68.99:0,69,599	0/0:17,0:15:44.97:0,45,385	0/0:18,0:18:44.99:0,45,390	0/0:13,0:13:35.99:0,36,313
chr10	2178351	.	AAGAAAT	A	2752.45	PASS	AC=12;AF=0.222;AN=54;BaseQRankSum=9.790;DP=528;FS=0.589;HRun=0;HaplotypeScore=134.5043;InbreedingCoeff=0.9896;MQ=65.66;MQ0=3;MQRankSum=-9.377;QD=43.69;ReadPosRankSum=0.369;VQSLOD=3.5756;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,13:13:27.09:663,27,0	0/0:10,0:10:30.06:0,30,1008	0/0:17,0:15:42.14:0,42,1450	0/0:14,0:14:15.92:0,16,1113	0/0:32,0:32:96.33:0,96,3317	0/0:31,0:31:90.26:0,90,3040	0/0:27,0:27:81.02:0,81,2546	1/1:3,6:6:15.05:369,15,0	1/1:0,10:10:21.07:515,21,0	0/0:18,0:18:54.18:0,54,1850	0/0:17,0:17:48.15:0,48,1578	0/0:30,0:29:81.16:0,81,2807	0/0:17,0:17:48.15:0,48,1673	0/0:33,0:33:99:0,99,3455	0/0:20,0:20:57.18:0,57,2003	0/0:25,0:25:72.25:0,72,2607	./.	0/0:30,0:30:90.24:0,90,2964	0/0:19,0:19:54.17:0,54,1839	0/0:18,0:18:54.19:0,54,1811	0/0:16,0:16:48.15:0,48,1634	0/0:26,0:26:78.24:0,78,2649	0/0:25,0:25:72.25:0,72,2495	0/0:17,0:16:51.16:0,51,1781	0/0:21,0:21:63.22:0,63,2306	1/1:0,7:7:21.06:468,21,0	1/1:0,12:11:21.07:511,21,0	1/1:1,10:11:18.06:411,18,0
chr10	2178446	.	GCA	G	728.76	PASS	AB=0.832;AC=7;AF=0.125;AN=56;BaseQRankSum=7.664;DP=596;FS=8.514;HRun=0;HaplotypeScore=107.5357;InbreedingCoeff=0.4537;MQ=63.09;MQ0=8;MQRankSum=-2.902;QD=7.84;ReadPosRankSum=1.227;VQSLOD=2.9562;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:26:8.53:81,9,0	0/0:9,0:9:21.07:0,21,349	0/0:33,0:19:41.18:0,41,561	0/0:33,0:17:42.12:0,42,641	0/0:23,0:23:21.07:0,21,350	0/0:20,0:20:26.51:0,27,677	0/0:24,0:24:57.12:0,57,882	0/1:8,9:12:35.03:151,0,35	1/1:18,3:16:21.07:261,21,0	0/0:21,0:19:54.18:0,54,910	0/0:22,0:22:38.81:0,39,576	0/0:31,0:30:80.94:0,81,1289	0/0:13,0:13:30.10:0,30,483	0/0:24,0:23:63.22:0,63,1079	0/0:18,0:18:42.14:0,42,693	0/0:21,0:21:45.14:0,45,713	0/1:13,0:13:7.57:85,0,8	0/0:27,0:27:72.13:0,72,1089	0/0:14,0:13:33:0,33,518	0/0:14,0:14:24.08:0,24,400	0/0:42,0:40:89.99:0,90,1382	0/0:11,0:10:12.04:0,12,188	0/0:19,0:19:35.99:0,36,576	0/0:30,0:30:84.08:0,84,1337	0/0:26,0:26:43.03:0,43,700	0/1:13,3:13:55.41:287,0,55	0/0:8,6:12:2.95:0,3,27	0/0:5,9:13:5.81:0,6,34
chr10	2178451	.	C	CAT	724.39	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=8.782;DP=634;FS=10.806;HRun=0;HaplotypeScore=115.4428;InbreedingCoeff=0.4261;MQ=60.67;MQ0=8;MQRankSum=-4.237;QD=6.59;ReadPosRankSum=0.255;VQSLOD=2.7829;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,26:34:19.35:460,19,0	0/0:8,0:8:24.07:0,24,341	0/0:30,0:16:44.41:0,44,587	0/0:32,0:16:42.12:0,42,605	0/0:23,0:23:18.80:0,19,124	0/0:21,0:21:57.12:0,57,739	0/0:27,0:27:45.63:0,46,893	0/1:22,0:13:22.02:141,0,22	1/1:23,0:18:4.89:86,5,0	0/0:21,0:19:54.18:0,54,809	0/0:25,0:25:47.76:0,48,576	0/0:34,0:33:84.26:0,84,1249	0/0:15,0:15:36.09:0,36,497	0/0:28,0:27:69.20:0,69,1004	0/0:17,0:17:42.14:0,42,635	0/0:21,0:21:49.69:0,50,691	0/1:14,0:14:7.76:39,0,8	0/0:29,0:29:75.58:0,76,1046	0/0:15,0:12:33.11:0,33,505	0/0:12,0:12:24.06:0,24,343	0/0:40,0:38:93.14:0,93,1305	0/0:14,0:13:15.04:0,15,198	0/0:21,0:21:36.12:0,36,547	0/0:32,0:32:87.28:0,87,1300	0/0:28,0:28:51.14:0,51,732	0/1:17,0:14:39.02:132,0,39	0/0:17,0:15:2.33:0,2,23	0/0:13,1:13:5.55:0,6,28
chr10	2183879	.	CT	C	1724.08	PASS	AB=0.868;AC=10;AF=0.179;AN=56;BaseQRankSum=6.766;DP=508;FS=5.583;HRun=11;HaplotypeScore=55.2641;InbreedingCoeff=0.7127;MQ=64.26;MQ0=0;MQRankSum=1.292;QD=12.77;ReadPosRankSum=0.063;VQSLOD=3.2438;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:24:45.71:0,46,240	0/0:5,0:5:12.02:0,12,122	0/1:9,2:10:34.30:34,0,67	0/0:10,0:8:12.02:0,12,120	0/0:24,0:24:57.06:0,57,574	0/1:14,2:15:22.23:22,0,191	0/0:11,1:12:8.41:0,8,284	1/1:7,26:33:71.84:582,72,0	0/0:2,0:14:28.64:0,29,162	0/0:14,0:14:33.08:0,33,346	0/0:19,1:20:26.44:0,26,462	0/0:19,0:19:33.08:0,33,352	0/0:22,0:22:57.12:0,57,592	0/0:23,0:23:32.28:0,32,472	0/0:17,1:18:11.45:0,11,327	0/0:22,0:22:23.25:0,23,495	0/0:12,0:12:30.02:0,30,306	0/0:15,1:16:11.34:0,11,281	0/0:19,1:20:23.44:0,23,434	0/0:25,2:27:16.88:0,17,584	0/0:10,0:10:21.01:0,21,202	0/0:14,0:14:39.09:0,39,409	0/0:15,1:16:17.28:0,17,358	0/0:10,0:10:27.07:0,27,288	0/0:20,0:20:47.23:0,47,505	1/1:2,21:23:30.92:460,31,0	1/1:8,26:33:68.89:566,69,0	1/1:7,10:18:28.95:228,29,0
chr10	2191475	.	G	GC	738.58	PASS	AB=0.729;AC=23;AF=0.767;AN=30;BaseQRankSum=-2.627;DP=115;FS=25.293;HRun=1;HaplotypeScore=52.3469;InbreedingCoeff=0.1529;MQ=86.70;MQ0=0;MQRankSum=-3.147;QD=11.02;ReadPosRankSum=-0.202;VQSLOD=0.0508;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/1:7,0:6:15.19:15,0,40	0/1:5,0:4:4.28:12,0,4	0/1:1,5:6:0:0,0,0	./.	1/1:4,5:9:5.12:49,5,0	1/1:3,3:6:17.23:181,17,0	./.	1/1:0,1:1:3.01:42,3,0	./.	0/1:2,4:6:0:0,0,0	./.	./.	0/1:0,3:3:0:0,0,0	1/1:0,5:5:6.02:79,6,0	1/1:1,6:7:9.03:109,9,0	./.	1/1:0,1:1:3.01:45,3,0	./.	0/0:1,0:1:0:0,0,0	./.	./.	./.	./.	1/1:1,4:5:12.04:167,12,0	1/1:0,3:3:6.02:80,6,0	1/1:0,3:3:3.01:43,3,0
chr10	2191479	.	CG	C	826.85	PASS	AB=0.678;AC=26;AF=0.867;AN=30;BaseQRankSum=-1.088;DP=129;FS=5.001;HRun=2;HaplotypeScore=53.7328;InbreedingCoeff=0.0530;MQ=108.42;MQ0=0;MQRankSum=-2.527;QD=10.08;ReadPosRankSum=0.830;VQSLOD=1.5157;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/1:10,4:13:31.11:160,0,31	0/1:7,1:7:17.16:72,0,17	0/1:1,5:6:0:0,0,0	./.	1/1:6,5:11:5.71:42,6,0	1/1:4,3:7:20.23:187,20,0	./.	1/1:0,1:1:3.01:33,3,0	./.	1/1:1,5:6:0.47:1,0,0	./.	./.	0/1:0,3:3:0:0,0,0	1/1:0,5:5:6.01:61,6,0	1/1:1,6:7:9:81,9,0	./.	1/1:0,1:1:3.01:36,3,0	./.	1/1:2,0:2:3.01:34,3,0	./.	./.	./.	./.	1/1:1,4:5:11.98:113,12,0	1/1:0,3:3:6.01:62,6,0	1/1:0,3:3:3.01:34,3,0
chr10	2191480	.	G	GC	1262.80	PASS	AB=0.892;AC=26;AF=0.867;AN=30;BaseQRankSum=-1.112;DP=148;FS=14.357;HRun=1;HaplotypeScore=63.3758;InbreedingCoeff=0.0128;MQ=105.99;MQ0=0;MQRankSum=-2.803;QD=13.43;ReadPosRankSum=0.799;VQSLOD=1.2297;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/1:15,0:14:39.72:134,0,40	0/1:7,1:8:13.81:100,0,14	0/1:6,1:7:0:0,0,0	./.	1/1:6,6:12:8.54:125,9,0	1/1:4,4:8:21.07:309,21,0	./.	1/1:1,0:1:3.01:42,3,0	./.	0/1:6,1:7:0:0,0,0	./.	./.	1/1:5,0:5:2.97:20,3,0	1/1:7,0:7:6.02:79,6,0	1/1:7,1:8:12.04:154,12,0	./.	1/1:1,0:1:3.01:45,3,0	./.	1/1:0,2:2:3.01:34,3,0	./.	./.	./.	./.	1/1:4,1:5:12.03:149,12,0	1/1:4,0:4:9.03:118,9,0	1/1:3,0:3:3.01:43,3,0
chr10	2191544	.	TTC	T	5822.97	PASS	AB=0.941;AC=53;AF=0.946;AN=56;BaseQRankSum=1.990;DP=250;FS=72.595;HRun=0;HaplotypeScore=123.5021;InbreedingCoeff=0.3152;MQ=90.93;MQ0=0;MQRankSum=-7.849;QD=24.88;ReadPosRankSum=4.977;VQSLOD=2.2730;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,15:15:28.59:216,29,0	1/1:0,5:5:15.02:149,15,0	0/1:15,1:16:22.55:23,0,119	0/0:16,0:16:1.23:0,1,46	1/1:0,10:10:26.86:240,27,0	1/1:0,14:14:41.30:396,41,0	1/1:0,10:10:30.06:300,30,0	1/1:3,8:11:33.09:379,33,0	1/1:1,7:8:21.89:196,22,0	1/1:0,8:8:24.07:282,24,0	1/1:1,8:9:21.58:170,22,0	1/1:0,14:14:41.12:400,41,0	1/1:0,7:7:20.25:182,20,0	1/1:0,13:13:38.09:355,38,0	1/1:0,6:6:15.03:149,15,0	1/1:0,9:9:27.06:273,27,0	1/1:0,7:7:18.05:194,18,0	1/1:0,7:7:15.04:166,15,0	1/1:1,7:8:21.06:249,21,0	1/1:0,6:6:17.36:148,17,0	1/1:0,3:2:5.38:40,5,0	1/1:1,5:6:16.52:137,17,0	1/1:0,9:9:27.03:253,27,0	1/1:1,5:6:13.82:115,14,0	1/1:0,8:8:24.05:243,24,0	1/1:1,9:10:27.07:298,27,0	1/1:0,7:7:20.09:203,20,0	1/1:0,2:2:6.02:67,6,0
chr10	2191549	.	C	CT	6779.03	PASS	AB=1.000;AC=53;AF=0.946;AN=56;BaseQRankSum=1.370;DP=281;FS=116.210;HRun=1;HaplotypeScore=127.8032;InbreedingCoeff=0.6458;MQ=80.41;MQ0=0;MQRankSum=-8.009;QD=25.39;ReadPosRankSum=4.118;VQSLOD=0.2843;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,15:19:39.09:410,39,0	1/1:2,5:7:15.02:144,15,0	0/0:14,0:14:38.38:0,38,351	0/1:13,0:13:3.91:4,0,231	1/1:2,10:12:26.60:228,27,0	1/1:0,14:14:42.07:411,42,0	1/1:3,11:14:33.06:322,33,0	1/1:2,8:10:30.09:349,30,0	1/1:4,7:11:27.06:280,27,0	1/1:1,9:10:29.58:340,30,0	1/1:1,8:9:23.97:218,24,0	1/1:1,14:15:42.08:413,42,0	1/1:2,7:9:27.05:297,27,0	1/1:1,14:15:42.05:404,42,0	1/1:0,6:6:15.02:144,15,0	1/1:2,9:11:30.06:298,30,0	1/1:1,7:8:21.05:220,21,0	1/1:2,7:9:21.01:215,21,0	1/1:1,7:8:24.07:290,24,0	1/1:3,6:9:18:171,18,0	1/1:0,3:2:6.02:70,6,0	1/1:2,5:7:20.88:196,21,0	1/1:1,10:11:27:244,27,0	1/1:1,5:6:15:137,15,0	1/1:1,8:9:27.05:267,27,0	1/1:1,10:11:33.08:385,33,0	1/1:2,7:9:24.06:257,24,0	1/1:0,2:2:6.02:65,6,0
chr10	2191909	.	TCC	T	8275.87	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=12.777;DP=684;FS=5.477;HRun=2;HaplotypeScore=81.8840;InbreedingCoeff=0.9942;MQ=96.69;MQ0=0;MQRankSum=-4.738;QD=43.10;ReadPosRankSum=2.719;VQSLOD=4.8749;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,48:48:99:1780,111,0	0/0:9,0:9:27.08:0,27,509	0/0:39,0:39:99:0,104,2080	0/0:28,0:28:71.39:0,71,1453	0/0:25,0:25:66.02:0,66,1217	0/0:35,0:35:99:0,105,1782	0/0:24,0:24:72.25:0,72,1443	1/1:0,35:35:99:1683,105,0	1/1:0,27:27:69.24:1124,69,0	0/0:23,0:23:66.20:0,66,1301	0/0:16,0:16:42.06:0,42,769	0/0:20,0:20:60.15:0,60,1107	0/0:29,0:29:86.83:0,87,1586	0/0:27,0:27:81.18:0,81,1537	0/0:17,0:17:51.16:0,51,1000	0/0:24,0:23:72.22:0,72,1412	1/1:0,35:35:96.33:1565,96,0	0/0:19,0:19:54.11:0,54,1015	0/0:23,0:23:63.13:0,63,1196	0/0:22,0:22:66:0,66,1252	0/0:30,0:30:87.28:0,87,1683	0/0:17,0:17:48.16:0,48,935	0/0:15,0:15:45.07:0,45,817	0/0:24,0:24:72.24:0,72,1406	0/0:26,0:26:69.06:0,69,1317	1/1:0,25:25:75.22:1196,75,0	1/1:0,17:17:45.15:733,45,0	1/1:0,5:5:12.04:195,12,0
chr10	2194277	.	ATC	A	4120.41	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=12.918;DP=832;FS=0.381;HRun=0;HaplotypeScore=94.4291;InbreedingCoeff=0.9995;MQ=90.11;MQ0=0;MQRankSum=-1.960;QD=33.77;ReadPosRankSum=-1.823;VQSLOD=5.2693;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,99,1754	0/0:18,0:18:48.16:0,48,844	0/0:39,0:38:99:0,105,1741	0/0:25,0:25:47.72:0,48,802	0/0:30,0:30:90.31:0,90,1596	0/0:32,0:32:87.30:0,87,1528	0/0:21,0:21:57.20:0,57,1011	1/1:7,32:39:96.29:1285,96,0	0/0:26,0:26:75.26:0,75,1317	0/0:29,0:29:84.28:0,84,1458	0/0:21,0:21:60.21:0,60,1057	0/0:22,0:22:63.20:0,63,1089	0/0:39,0:39:99:0,117,2075	0/0:31,0:31:90.31:0,90,1596	0/0:45,0:45:99:0,129,2254	0/0:37,0:37:99:0,105,1834	0/0:28,0:28:84.29:0,84,1491	0/0:17,0:17:48.16:0,48,851	0/0:24,0:24:63.21:0,63,1077	0/0:28,0:28:81.28:0,81,1437	0/0:34,0:34:96.33:0,96,1704	0/0:34,0:34:99:0,102,1786	0/0:30,0:30:84.29:0,84,1491	0/0:37,0:37:99:0,105,1858	0/0:26,0:26:75.22:0,75,1273	1/1:5,26:31:24.99:977,25,0	1/1:1,35:36:96.30:1301,96,0	1/1:1,15:16:42.11:557,42,0
chr10	2194673	.	C	CA	176.11	PASS	AB=0.726;AC=2;AF=0.036;AN=56;BaseQRankSum=-2.113;DP=644;FS=8.427;HRun=8;HaplotypeScore=62.3877;InbreedingCoeff=0.3840;MQ=85.16;MQ0=0;MQRankSum=-1.232;QD=8.39;ReadPosRankSum=-0.110;VQSLOD=0.7115;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,102,929	0/1:10,1:12:5.58:6,0,197	0/0:22,0:22:40.23:0,40,353	0/0:21,0:21:12.51:0,13,322	0/0:28,0:28:84.05:0,84,768	0/0:20,0:20:54.03:0,54,494	0/0:20,0:20:45.26:0,45,483	0/0:36,0:36:90.03:0,90,824	0/1:1,8:9:0.39:250,0,0	0/0:32,0:32:69.01:0,69,631	0/0:26,0:26:69.03:0,69,632	0/0:23,0:23:63.03:0,63,577	0/0:20,0:20:53.99:0,54,484	0/0:17,0:17:48.03:0,48,439	0/0:36,0:36:99:0,99,897	0/0:20,0:20:54.03:0,54,494	0/0:36,0:36:99:0,105,960	0/0:11,0:11:27.01:0,27,247	0/0:13,0:13:33.01:0,33,302	0/0:21,0:21:54:0,54,490	0/0:19,0:19:48.02:0,48,439	0/0:27,0:27:69.03:0,69,631	0/0:27,0:27:78:0,78,704	0/0:28,0:28:81.01:0,81,729	0/0:25,0:25:63.02:0,63,572	0/0:25,0:25:69:0,69,624	0/0:26,0:26:63.03:0,63,577	0/0:8,0:8:17.97:0,18,153
chr10	2195461	.	CATTTATTTATTTATTTATTT	C	3796.33	PASS	AB=0.708;AC=9;AF=0.167;AN=54;BaseQRankSum=8.258;DP=272;FS=0.738;HRun=0;HaplotypeScore=141.1475;InbreedingCoeff=0.5490;MQ=64.65;MQ0=0;MQRankSum=-3.267;QD=36.86;ReadPosRankSum=-1.352;VQSLOD=2.8128;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:10,0:17:33.93:88,0,34	0/0:8,0:8:15.04:0,15,638	0/0:4,0:4:3.01:0,3,43	0/0:3,0:3:5.99:0,6,76	0/0:11,0:11:12.04:0,12,747	0/0:10,0:10:21.06:0,21,1714	0/0:3,0:3:3.01:0,3,281	1/1:25,12:37:36.09:562,36,0	0/0:3,0:4:6.02:0,6,155	0/0:7,0:8:12.04:0,12,478	0/0:6,0:8:9.03:0,9,417	./.	0/0:5,0:5:15.03:0,15,874	0/0:7,0:7:3.01:0,3,281	0/0:7,0:7:12.04:0,12,895	0/0:4,0:4:3.01:0,3,81	0/0:12,0:25:42.12:0,42,2347	0/0:14,0:14:27.09:0,27,1641	0/0:11,0:11:15.04:0,15,503	0/0:8,0:8:9.02:0,9,160	0/0:5,0:5:9.03:0,9,737	0/0:2,0:2:3.01:0,3,56	0/0:3,0:4:3.01:0,3,182	0/0:2,0:3:6.01:0,6,208	0/0:15,0:15:36.12:0,36,2530	1/1:11,7:18:21.07:895,21,0	1/1:5,16:21:27.09:1446,27,0	1/1:3,7:10:15.05:805,15,0
chr10	2195593	.	CAGAT	C	1488.78	PASS	AB=1.000;AC=27;AF=0.563;AN=48;BaseQRankSum=5.035;DP=415;FS=10.925;HRun=0;HaplotypeScore=76.1107;InbreedingCoeff=0.4634;MQ=72.60;MQ0=4;MQRankSum=-1.719;QD=6.68;ReadPosRankSum=0.484;VQSLOD=1.0754;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:12,9:21:17.70:272,18,0	0/0:5,0:5:3.01:0,3,52	./.	./.	1/1:10,4:14:6.02:91,6,0	0/0:18,0:18:30.10:0,30,680	0/0:4,0:4:3.01:0,3,69	./.	1/1:14,5:19:12.04:182,12,0	0/0:16,0:16:3.01:0,3,69	0/1:11,0:11:15.84:16,0,130	0/0:14,0:14:18.06:0,18,415	0/0:11,0:11:6.02:0,6,139	0/1:21,0:21:24.32:24,0,335	1/1:8,4:12:6.02:91,6,0	0/0:14,0:14:9.03:0,9,208	1/1:15,9:24:27.09:408,27,0	0/1:14,0:14:27.30:27,0,272	1/1:7,3:9:6.02:91,6,0	./.	0/0:13,0:19:12.04:0,12,200	0/0:10,0:10:6.02:0,6,139	1/1:9,1:10:6.02:91,6,0	1/1:12,0:12:3:25,3,0	1/1:4,2:6:3.01:45,3,0	1/1:12,0:17:14.89:127,15,0	1/1:17,0:25:9.01:84,9,0	1/1:3,0:7:9.01:84,9,0
chr10	2195834	.	CCT	C	116.47	PASS	AB=0.856;AC=8;AF=0.160;AN=50;BaseQRankSum=2.522;DP=418;FS=0.000;HRun=0;HaplotypeScore=68.4579;InbreedingCoeff=-0.2248;MQ=81.46;MQ0=14;MQRankSum=0.883;QD=0.95;ReadPosRankSum=1.004;VQSLOD=1.0918;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:8.99:0,9,74	0/0:1,0:1:3.01:0,3,37	0/0:51,0:18:12.87:0,13,219	0/0:67,0:30:30.26:0,30,416	0/0:7,0:7:12.03:0,12,166	0/1:6,2:8:26.95:27,0,87	0/0:12,0:12:27.09:0,27,411	0/0:19,0:18:22.12:0,22,253	0/0:9,0:9:5.99:0,6,48	0/0:9,0:9:18.06:0,18,268	./.	0/0:12,0:12:18.06:0,18,269	0/0:16,0:16:36.08:0,36,515	0/1:12,1:13:11.91:12,0,280	0/1:13,0:13:8.92:9,0,311	0/1:7,2:9:17.92:18,0,222	0/0:22,0:22:36.38:0,36,291	0/0:15,0:15:36.06:0,36,496	0/0:9,0:9:18.04:0,18,236	./.	0/1:27,7:33:71.69:72,0,792	0/0:4,0:4:6.02:0,6,94	0/0:2,0:2:3.01:0,3,45	0/1:24,2:28:28.01:28,0,846	0/1:1,2:3:29.96:30,0,42	0/0:9,0:9:15.01:0,15,185	0/1:14,0:13:48.03:48,0,115	./.
chr10	2195846	.	T	TCTCTCG	1184.17	PASS	AB=1.000;AC=9;AF=0.173;AN=52;BaseQRankSum=7.510;DP=435;FS=5.841;HRun=0;HaplotypeScore=98.5408;InbreedingCoeff=0.4331;MQ=79.52;MQ0=15;MQRankSum=-0.156;QD=11.61;ReadPosRankSum=1.001;VQSLOD=1.4513;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,26:31:9.03:295,9,0	0/0:3,0:3:8.99:0,9,74	0/0:55,0:21:31.18:0,31,408	0/0:71,0:32:4.34:0,4,322	0/0:8,0:8:18.01:0,18,254	0/0:8,0:8:12:0,12,204	0/0:15,0:15:39.05:0,39,608	0/1:22,0:21:99:104,0,226	1/1:6,0:6:6.02:113,6,0	0/0:11,0:11:27.02:0,27,423	./.	0/0:12,0:12:29.26:0,29,469	0/0:18,0:18:48.01:0,48,762	0/0:16,0:16:39.05:0,39,592	0/0:9,0:9:27.04:0,27,463	0/0:10,0:10:24.05:0,24,398	1/1:21,0:21:35.40:674,35,0	0/0:16,0:16:44.86:0,45,659	0/0:9,0:9:27.04:0,27,377	./.	0/0:36,0:35:88.99:0,89,1442	0/0:4,0:4:12.02:0,12,170	0/0:1,0:1:3.01:0,3,49	0/0:26,0:26:72.23:0,72,1452	0/0:3,0:3:6.02:0,6,115	0/1:9,0:9:53.71:113,0,54	0/1:13,0:12:28.26:28,0,86	0/0:1,0:1:2.04:0,2,6
chr10	2195848	.	T	TCTCG	1607.94	PASS	AB=1.000;AC=11;AF=0.212;AN=52;BaseQRankSum=6.317;DP=440;FS=7.774;HRun=0;HaplotypeScore=83.4117;InbreedingCoeff=0.4783;MQ=79.19;MQ0=15;MQRankSum=-1.274;QD=15.03;ReadPosRankSum=0.632;VQSLOD=2.6039;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:32,0:32:8.99:148,9,0	0/0:5,0:5:8.79:0,9,63	0/0:55,0:21:41.17:0,41,504	0/0:70,0:31:6.97:0,7,457	0/0:9,0:9:18.01:0,18,235	0/0:8,0:8:11.25:0,11,154	0/0:15,0:15:38.94:0,39,551	0/1:24,0:23:99:285,0,222	1/1:0,6:7:6.02:161,6,0	0/0:11,0:11:29.98:0,30,406	./.	0/0:12,0:12:30.03:0,30,428	0/0:17,0:17:47.98:0,48,669	0/0:16,0:16:42.02:0,42,560	0/0:9,0:9:27.05:0,27,413	0/0:10,0:10:24.04:0,24,362	1/1:3,17:20:35.20:922,35,0	0/0:16,0:16:44.88:0,45,641	0/0:10,0:10:27.05:0,27,361	./.	0/0:36,0:35:90.09:0,90,1260	0/0:4,0:4:12.02:0,12,157	0/0:1,0:1:3.01:0,3,49	0/0:25,0:25:72.21:0,72,1192	0/0:3,0:3:6.02:0,6,90	0/1:8,0:8:70.27:179,0,70	0/1:15,0:14:44.91:45,0,93	1/1:1,0:1:2.97:20,3,0
chr10	2195856	.	G	GCTCTCTCT	2900.40	PASS	AB=1.000;AC=15;AF=0.278;AN=54;BaseQRankSum=0.919;DP=390;FS=16.110;HRun=0;HaplotypeScore=108.5916;InbreedingCoeff=0.8075;MQ=83.73;MQ0=8;MQRankSum=-1.650;QD=18.83;ReadPosRankSum=-3.052;VQSLOD=0.9371;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:18:15.04:273,15,0	0/0:5,0:5:14.99:0,15,182	0/0:42,0:21:18.76:0,19,498	0/1:54,0:32:3.72:4,0,423	0/0:7,0:7:20.98:0,21,358	0/0:6,0:6:15.05:0,15,357	0/0:14,0:14:33.11:0,33,697	1/1:27,0:25:62.16:959,62,0	1/1:8,0:8:11.92:144,12,0	0/0:11,0:11:27.03:0,27,500	./.	0/0:8,0:8:21.07:0,21,503	0/0:15,0:15:42.13:0,42,892	0/0:15,0:15:42.13:0,42,865	0/0:8,0:8:21.05:0,21,519	0/0:10,0:10:18.06:0,18,425	1/1:19,0:19:37.31:698,37,0	0/0:17,0:17:33.08:0,33,734	0/0:11,0:11:20.73:0,21,348	0/0:2,0:2:2.98:0,3,21	0/0:31,0:30:75.22:0,75,1744	0/0:3,0:3:6:0,6,107	0/0:2,0:2:6:0,6,89	0/0:25,0:25:66.21:0,66,1710	0/0:4,0:4:6.02:0,6,161	1/1:1,7:12:27.01:611,27,0	1/1:5,6:14:11.63:335,12,0	1/1:2,0:2:5.98:60,6,0
chr10	2195980	.	TTATATATATATTTA	T	1873.03	PASS	AB=1.000;AC=8;AF=0.222;AN=36;BaseQRankSum=2.627;DP=175;FS=2.787;HRun=0;HaplotypeScore=68.7062;InbreedingCoeff=0.3615;MQ=95.10;MQ0=4;MQRankSum=0.096;QD=18.01;ReadPosRankSum=-3.792;VQSLOD=0.4663;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:2,0:3:6.02:0,6,195	./.	0/1:21,0:9:16.21:16,0,55	0/1:42,0:15:13.96:14,0,51	0/0:1,0:1:3.01:0,3,196	./.	0/0:1,0:1:3.01:0,3,158	1/1:6,23:29:69.16:1112,69,0	./.	0/0:3,0:3:9.03:0,9,532	./.	0/0:3,0:3:6:0,6,230	0/0:2,0:2:6.02:0,6,325	0/0:4,0:4:6.02:0,6,257	0/0:1,0:1:3:0,3,25	./.	0/0:25,0:25:62.84:0,63,2635	0/0:13,0:13:36.12:0,36,2019	./.	0/0:1,0:1:3.01:0,3,50	0/0:1,0:1:3.01:0,3,44	./.	./.	./.	0/0:5,0:5:15.05:0,15,714	./.	1/1:0,3:3:9.03:368,9,0	1/1:1,6:6:12.04:487,12,0
chr10	2196001	.	TA	T	863.94	PASS	AB=1.000;AC=7;AF=0.206;AN=34;BaseQRankSum=3.209;DP=164;FS=4.257;HRun=1;HaplotypeScore=45.6550;InbreedingCoeff=0.3472;MQ=88.76;MQ0=3;MQRankSum=1.214;QD=16.30;ReadPosRankSum=2.019;VQSLOD=3.8869;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,3:4:6.01:71,6,0	./.	0/1:20,0:9:17.21:17,0,120	0/0:42,0:13:1.68:0,2,26	0/0:3,0:3:9.03:0,9,128	./.	0/0:1,0:1:3.01:0,3,47	0/0:30,0:29:13.96:0,14,204	./.	0/0:3,0:3:9.03:0,9,141	./.	0/0:2,0:2:6.02:0,6,94	0/0:2,0:2:6.02:0,6,91	0/0:1,0:1:3.01:0,3,47	./.	./.	1/1:0,22:21:63.21:881,63,0	0/0:14,0:14:42.14:0,42,657	0/0:1,0:1:3.01:0,3,47	./.	./.	./.	./.	./.	0/0:5,0:5:15.04:0,15,213	0/0:1,0:1:3.01:0,3,34	0/0:5,0:5:5.40:0,5,67	1/1:7,0:6:0.47:2,0,0
chr10	2196124	.	AAT	A	4714.53	PASS	AB=0.896;AC=18;AF=0.321;AN=56;BaseQRankSum=7.540;DP=342;FS=40.366;HRun=0;HaplotypeScore=51.4087;InbreedingCoeff=0.6289;MQ=78.21;MQ0=0;MQRankSum=-0.330;QD=25.48;ReadPosRankSum=-0.061;VQSLOD=3.1355;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,14:16:39.08:474,39,0	0/0:3,0:3:9.03:0,9,150	0/0:15,0:16:33.34:0,33,463	0/0:3,0:3:3.01:0,3,43	0/0:15,0:15:45.15:0,45,739	0/0:6,0:6:15.05:0,15,249	0/1:7,0:7:16.77:17,0,278	1/1:10,32:43:99:1209,99,0	1/1:0,12:12:36.12:454,36,0	0/0:0,0:12:28.78:0,29,246	0/0:0,0:11:33.02:0,33,293	0/0:10,0:10:30.10:0,30,499	0/0:14,0:14:36.12:0,36,597	0/0:5,0:5:15.05:0,15,249	0/1:10,1:11:4.76:5,0,466	0/1:10,1:11:7.78:8,0,394	1/1:2,25:27:72.23:909,72,0	0/0:16,1:17:10.29:0,10,700	0/0:8,0:8:24.06:0,24,353	0/0:11,0:12:36.11:0,36,575	0/1:6,3:9:86.52:87,0,272	0/0:2,0:2:6.02:0,6,100	0/0:7,0:7:21.07:0,21,349	0/0:2,0:2:6.02:0,6,100	0/0:14,0:14:17.36:0,17,624	1/1:1,10:11:30.10:379,30,0	1/1:1,20:21:54.17:681,54,0	1/1:4,13:17:39.12:492,39,0
chr10	2196967	.	TTATA	T	662.06	PASS	AB=0.909;AC=5;AF=0.093;AN=54;BaseQRankSum=5.040;DP=231;FS=5.199;HRun=0;HaplotypeScore=38.3278;InbreedingCoeff=0.5050;MQ=85.56;MQ0=1;MQRankSum=-0.592;QD=17.89;ReadPosRankSum=2.973;VQSLOD=2.1609;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,13:16:27.09:467,27,0	0/0:5,0:5:9.03:0,9,227	0/1:9,0:7:0:0,0,0	0/0:16,0:13:7.01:0,7,54	0/0:5,0:5:6.02:0,6,152	0/0:11,0:11:30.10:0,30,754	0/0:2,0:2:3.01:0,3,76	0/0:36,0:36:84.27:0,84,1927	0/0:1,0:3:6.02:0,6,106	0/0:5,0:5:12.04:0,12,304	0/0:7,0:7:12.03:0,12,190	0/0:6,0:6:12.04:0,12,279	0/0:7,0:7:21.06:0,21,477	0/0:3,0:3:6:0,6,100	0/0:8,0:8:18.06:0,18,455	0/0:2,0:2:3.01:0,3,76	1/1:3,7:10:18.06:311,18,0	0/0:20,0:20:51.18:0,51,1286	0/0:9,0:9:21.06:0,21,461	./.	0/0:5,0:5:6.02:0,6,152	0/0:3,0:3:3.01:0,3,76	0/0:4,0:4:6:0,6,100	0/0:5,0:5:3.01:0,3,76	0/0:6,0:6:12.02:0,12,203	0/0:3,0:3:9.03:0,9,223	0/0:11,0:11:24.08:0,24,587	0/0:9,0:9:18.06:0,18,455
chr10	2201517	.	GT	G	2125.97	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.375;DP=532;FS=5.891;HRun=3;HaplotypeScore=51.5472;InbreedingCoeff=0.9988;MQ=75.83;MQ0=1;MQRankSum=-5.167;QD=31.73;ReadPosRankSum=1.627;VQSLOD=3.5324;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,26:26:66.21:818,66,0	0/0:14,0:14:39.13:0,39,561	0/0:17,0:16:45.11:0,45,611	0/0:19,0:17:35.09:0,35,434	0/0:29,0:29:81.26:0,81,1144	0/0:20,0:20:60.20:0,60,863	0/0:16,0:16:48.16:0,48,686	0/0:25,0:25:75.24:0,75,1060	1/1:0,18:18:51.16:632,51,0	0/0:17,0:17:51.14:0,51,712	0/0:20,0:20:57.17:0,57,772	0/0:17,0:17:48.15:0,48,675	0/0:18,0:18:54.18:0,54,773	0/0:9,0:9:27.09:0,27,389	0/0:15,0:15:42.14:0,42,604	0/0:15,0:15:45.14:0,45,632	1/1:0,23:23:66.21:818,66,0	0/0:20,0:20:60.20:0,60,856	0/0:24,0:24:69.23:0,69,994	0/0:27,0:27:78.25:0,78,1104	0/0:15,0:15:42.13:0,42,587	0/0:17,0:17:48.15:0,48,668	0/0:19,0:19:57.18:0,57,804	0/0:8,0:8:24.08:0,24,345	0/0:22,0:22:66.20:0,66,930	0/0:23,0:23:69.21:0,69,975	0/0:20,0:20:60.19:0,60,847	0/0:19,0:19:54.18:0,54,778
chr10	2202088	.	T	TG	354.72	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-2.320;DP=573;FS=2.518;HRun=2;HaplotypeScore=58.2732;InbreedingCoeff=0.9924;MQ=63.06;MQ0=2;MQRankSum=1.252;QD=29.56;ReadPosRankSum=-1.506;VQSLOD=2.8666;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,117,1444	0/0:8,0:8:21.07:0,21,272	0/0:24,0:16:34.71:0,35,435	0/0:22,0:21:52.98:0,53,707	0/0:10,0:10:26.64:0,27,303	0/0:29,0:29:87.27:0,87,1110	0/0:18,0:18:54.16:0,54,685	0/0:32,0:32:90.27:0,90,1131	1/1:0,12:12:30.10:449,30,0	0/0:9,0:9:27.09:0,27,344	0/0:17,0:17:48.11:0,48,589	0/0:12,0:12:36.12:0,36,467	0/0:16,0:16:45.15:0,45,584	0/0:19,0:19:48.15:0,48,614	0/0:26,0:26:78.24:0,78,998	0/0:20,0:20:57.18:0,57,739	0/0:32,0:32:87.23:0,87,1092	0/0:25,0:25:69.21:0,69,883	0/0:21,0:20:60.16:0,60,758	0/0:21,0:20:59.60:0,60,718	0/0:24,0:24:69.22:0,69,895	0/0:13,0:13:31.91:0,32,391	0/0:15,0:15:39.09:0,39,506	0/0:27,0:27:75.20:0,75,939	0/0:20,0:20:60.04:0,60,729	0/0:18,0:18:51.13:0,51,619	0/0:32,0:32:93.30:0,93,1207	0/0:11,0:11:33.11:0,33,428
chr10	2202508	.	TCGTTTCTTC	T	833.73	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.484;DP=645;FS=9.079;HRun=0;HaplotypeScore=179.6744;InbreedingCoeff=0.9981;MQ=85.78;MQ0=0;MQRankSum=-5.626;QD=64.13;ReadPosRankSum=1.127;VQSLOD=3.0090;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,8:13:33.11:928,33,0	0/0:9,0:9:27.09:0,27,1367	0/0:28,0:28:81.26:0,81,3255	0/0:19,0:18:51.17:0,51,2217	0/0:30,0:30:90.31:0,90,4437	0/0:27,0:27:78.27:0,78,3809	0/0:25,0:25:75.24:0,75,3423	0/0:29,0:29:87.30:0,87,4051	0/0:22,0:22:63.22:0,63,2697	0/0:28,0:28:84.29:0,84,4078	0/0:23,0:23:69.24:0,69,3311	0/0:19,0:19:57.20:0,57,2544	0/0:30,0:30:90.28:0,90,4230	0/0:15,0:15:45.15:0,45,2277	0/0:26,0:26:78.25:0,78,3725	0/0:28,0:28:84.29:0,84,4113	0/0:20,0:20:54.19:0,54,2369	0/0:12,0:12:36.12:0,36,1759	0/0:25,0:25:75.26:0,75,3399	0/0:22,0:22:66.23:0,66,3272	0/0:29,0:29:87.30:0,87,4187	0/0:24,0:24:72.23:0,72,3270	0/0:19,0:19:57.20:0,57,2677	0/0:24,0:24:72.25:0,72,3348	0/0:16,0:16:48.16:0,48,2288	0/0:34,0:34:99:0,102,4740	0/0:39,0:39:99:0,117,5718	0/0:10,0:10:30.10:0,30,1446
chr10	2202520	.	T	TA	2002.27	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.129;DP=707;FS=1.065;HRun=2;HaplotypeScore=74.5571;InbreedingCoeff=0.9998;MQ=84.72;MQ0=0;MQRankSum=-3.765;QD=29.45;ReadPosRankSum=2.788;VQSLOD=3.4071;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,14:22:53.43:550,53,0	0/0:12,0:12:36.11:0,36,446	0/0:26,0:26:69.11:0,69,800	0/0:22,0:21:47.22:0,47,580	0/0:31,0:31:93.22:0,93,1096	0/0:29,0:29:84.26:0,84,1041	0/0:23,0:23:66.20:0,66,807	0/0:32,0:32:90.23:0,90,1050	1/1:1,20:21:57.19:820,57,0	0/0:34,0:34:99:0,99,1161	0/0:21,0:21:63.18:0,63,759	0/0:19,0:19:54.16:0,54,657	0/0:31,0:31:93.24:0,93,1112	0/0:17,0:17:51.16:0,51,630	0/0:31,0:31:84.24:0,84,1017	0/0:27,1:28:38.05:0,38,899	1/1:1,24:25:54.18:774,54,0	0/0:16,0:16:45.14:0,45,556	0/0:27,0:27:81.24:0,81,986	0/0:28,0:28:84.24:0,84,1026	0/0:32,0:32:96.26:0,96,1162	0/0:26,0:26:75.20:0,75,885	0/0:17,0:17:45.12:0,45,544	0/0:29,0:29:81.24:0,81,990	0/0:19,0:19:51.15:0,51,618	0/0:34,0:34:99:0,99,1173	0/0:43,0:43:99:0,126,1549	0/0:12,0:12:33.08:0,33,394
chr10	2205397	.	GACAGAC	G	1728.18	PASS	AB=0.847;AC=9;AF=0.161;AN=56;BaseQRankSum=7.692;DP=491;FS=3.092;HRun=0;HaplotypeScore=99.6665;InbreedingCoeff=0.0814;MQ=51.31;MQ0=22;MQRankSum=0.634;QD=10.17;ReadPosRankSum=-1.664;VQSLOD=2.3007;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:21,0:21:99:244,0,99	0/0:5,0:5:15.05:0,15,368	0/0:9,0:3:8.90:0,9,129	0/1:16,0:4:11.16:11,0,31	0/0:14,0:13:24.71:0,25,851	0/0:18,0:18:41.82:0,42,811	0/0:21,0:20:43.49:0,43,908	0/1:25,20:41:44.85:644,0,45	0/1:18,0:17:99:163,0,213	0/0:17,0:17:51.16:0,51,916	0/0:11,0:11:33.11:0,33,712	0/0:21,0:19:44.45:0,44,1026	0/0:19,0:18:51.17:0,51,1124	0/0:9,0:9:24.06:0,24,419	0/0:13,0:13:8.18:0,8,570	0/0:15,0:14:42.11:0,42,916	0/1:6,0:19:6.87:47,0,7	0/0:11,0:11:32.78:0,33,802	0/0:16,0:13:25.84:0,26,560	0/0:24,0:24:17.20:0,17,1520	0/0:25,0:20:35.85:0,36,1068	0/0:19,0:18:48.14:0,48,964	0/0:14,0:13:33.10:0,33,562	0/0:19,0:19:48.16:0,48,1163	0/0:20,0:20:54.18:0,54,1367	0/1:16,0:18:32.14:325,0,32	1/1:8,0:15:9.53:270,10,0	0/1:9,0:11:16.51:165,0,17
chr10	2205401	.	GAC	G	778.03	PASS	AB=0.924;AC=7;AF=0.125;AN=56;BaseQRankSum=9.702;DP=492;FS=1.898;HRun=0;HaplotypeScore=70.4303;InbreedingCoeff=-0.1118;MQ=51.27;MQ0=21;MQRankSum=0.477;QD=5.26;ReadPosRankSum=0.640;VQSLOD=2.3639;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:18,0:18:56.93:121,0,57	0/0:6,0:6:18.06:0,18,345	0/0:12,0:3:6.02:0,6,115	0/0:19,0:4:5.80:0,6,79	0/0:13,0:12:36.11:0,36,599	0/0:17,0:17:39.05:0,39,650	0/0:23,0:22:54.03:0,54,848	0/1:42,0:39:99:211,0,288	0/1:18,0:17:84.66:91,0,85	0/0:17,0:17:51.13:0,51,888	0/0:12,0:12:36.12:0,36,661	0/0:22,0:20:57.19:0,57,966	0/0:18,0:18:54.17:0,54,942	0/0:9,0:9:27.06:0,27,428	0/0:10,0:10:30.10:0,30,527	0/0:16,0:15:45.10:0,45,778	0/1:25,0:19:5.30:5,0,59	0/0:11,0:11:30.10:0,30,558	0/0:16,0:14:33.27:0,33,516	0/0:25,0:25:71.27:0,71,1220	0/0:26,0:21:51.10:0,51,858	0/0:17,0:16:45.15:0,45,787	0/0:16,0:14:36.12:0,36,584	0/0:18,0:18:48.15:0,48,844	0/0:21,0:21:57.19:0,57,1020	0/1:19,0:18:76.64:186,0,77	0/1:9,6:16:8.60:190,0,9	0/1:7,3:10:27.63:101,0,28
chr10	2205709	.	T	TTC	1233.60	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=9.617;DP=508;FS=16.128;HRun=0;HaplotypeScore=78.4845;InbreedingCoeff=0.7862;MQ=69.71;MQ0=0;MQRankSum=-2.389;QD=14.34;ReadPosRankSum=1.783;VQSLOD=2.3118;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,33:42:78.15:1074,78,0	0/0:4,0:4:12.03:0,12,164	0/0:24,0:18:22.91:0,23,375	0/0:7,0:5:15.03:0,15,182	0/0:18,0:18:51.07:0,51,717	0/0:13,0:13:39.13:0,39,595	0/0:13,0:13:36.10:0,36,519	0/0:43,0:43:99:0,105,939	1/1:16,0:16:20.71:129,21,0	0/0:25,0:25:69.21:0,69,1001	0/0:14,0:14:42.13:0,42,605	0/0:14,0:14:42.13:0,42,620	0/0:13,0:13:39.13:0,39,579	0/0:12,0:12:33.11:0,33,504	0/0:18,0:18:51.16:0,51,756	0/0:16,0:16:48.15:0,48,713	0/1:28,0:28:8.91:159,0,9	0/0:19,0:19:54.18:0,54,786	0/0:20,0:20:57.18:0,57,839	0/0:23,0:23:60.20:0,60,913	0/0:8,0:8:24.08:0,24,361	0/0:14,0:14:42.07:0,42,610	0/0:14,0:14:42.14:0,42,640	0/0:12,0:11:36.12:0,36,550	0/0:22,0:22:63.19:0,63,940	0/0:20,0:20:52.74:0,53,401	0/0:26,0:26:50.59:0,51,333	0/0:10,0:10:17.28:0,17,71
chr10	2205710	.	T	TC	1051.88	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.973;DP=517;FS=8.976;HRun=0;HaplotypeScore=70.1153;InbreedingCoeff=0.9507;MQ=70.37;MQ0=0;MQRankSum=-1.406;QD=12.09;ReadPosRankSum=1.921;VQSLOD=3.8797;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:39,2:41:73.47:362,73,0	0/0:5,0:5:12.02:0,12,150	0/0:26,0:20:10.30:0,10,336	0/0:10,0:6:14.90:0,15,162	0/0:17,0:17:51.01:0,51,657	0/0:13,0:13:39.13:0,39,545	0/0:12,0:12:36.11:0,36,482	0/0:44,0:44:99:0,125,1512	1/1:1,15:16:44:377,44,0	0/0:24,0:24:72.22:0,72,959	0/0:14,0:14:42.08:0,42,539	0/0:14,0:14:42.12:0,42,553	0/0:13,0:13:39.12:0,39,531	0/0:11,0:11:33.11:0,33,461	0/0:18,0:18:51.16:0,51,695	0/0:16,0:16:48.16:0,48,670	1/1:5,25:30:10.34:451,10,0	0/0:19,0:19:54.07:0,54,714	0/0:20,0:20:57.16:0,57,775	0/0:24,0:24:63.08:0,63,851	0/0:9,0:9:24.08:0,24,330	0/0:16,0:16:42.14:0,42,579	0/0:15,0:15:42.14:0,42,585	0/0:12,0:11:36.12:0,36,502	0/0:21,0:21:63.20:0,63,866	0/0:19,0:19:57.17:0,57,717	0/0:27,0:27:75.09:0,75,850	0/0:10,0:10:27.07:0,27,302
chr10	2205711	.	A	ATT	4294.67	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=2.137;DP=536;FS=0.833;HRun=11;HaplotypeScore=74.7302;InbreedingCoeff=0.8823;MQ=69.88;MQ0=0;MQRankSum=1.111;QD=21.47;ReadPosRankSum=-0.643;VQSLOD=4.2059;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:43,0:43:89.48:1205,89,0	0/0:5,0:5:15.01:0,15,139	0/0:26,0:20:11.70:0,12,135	0/0:10,0:6:5.85:0,6,43	0/0:16,0:17:32.96:0,33,369	0/0:13,0:13:36.05:0,36,349	0/0:13,0:13:33.92:0,34,321	1/1:13,28:43:86.69:1138,87,0	1/1:16,0:16:36.75:131,37,0	0/0:27,0:27:63.01:0,63,605	0/0:15,0:15:26.92:0,27,304	0/0:13,0:13:33.02:0,33,314	0/0:13,0:13:30.01:0,30,291	0/0:12,0:12:33.02:0,33,320	0/0:19,0:19:38.96:0,39,378	0/0:16,0:16:42.04:0,42,402	0/1:31,0:31:7.44:107,0,7	0/0:17,0:18:29.95:0,30,340	0/0:19,0:20:32.97:0,33,370	0/0:24,0:24:41.97:0,42,408	0/0:8,0:9:17.72:0,18,151	0/0:16,0:16:29.96:0,30,286	0/0:15,0:15:42.03:0,42,401	0/0:12,0:11:33.03:0,33,314	0/0:21,0:21:57.06:0,57,547	1/1:8,12:22:15.48:502,15,0	1/1:5,22:29:59.69:834,60,0	1/1:4,10:16:27.09:376,27,0
chr10	2206098	.	GCCTTAGT	G	575.83	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.486;DP=730;FS=15.070;HRun=0;HaplotypeScore=168.3032;InbreedingCoeff=0.9978;MQ=86.32;MQ0=0;MQRankSum=-4.835;QD=33.87;ReadPosRankSum=1.749;VQSLOD=2.3294;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,111,4271	0/0:13,0:13:39.13:0,39,1540	0/0:22,0:22:62.58:0,63,2297	0/0:27,0:27:78.19:0,78,2758	0/0:37,0:37:99:0,111,4281	0/0:27,0:27:78.24:0,78,2898	0/0:26,0:26:78.24:0,78,3156	0/0:29,0:29:87.27:0,87,3334	0/0:38,0:38:99:0,111,4482	0/0:41,0:41:99:0,123,4926	0/0:16,0:16:48.15:0,48,1753	0/0:30,0:30:90.31:0,90,3704	0/0:33,0:33:99:0,99,4017	0/0:25,0:25:75.26:0,75,3069	0/0:31,0:31:93.31:0,93,3779	0/0:28,0:28:84.29:0,84,3470	1/1:0,17:17:24.08:669,24,0	0/0:12,0:12:36.12:0,36,1435	0/0:18,0:18:54.19:0,54,2119	0/0:24,0:24:72.25:0,72,2939	0/0:33,0:33:99:0,99,4064	0/0:16,0:16:48.16:0,48,1930	0/0:27,0:27:80.86:0,81,3168	0/0:25,0:25:72.21:0,72,2757	0/0:17,0:17:51.17:0,51,1928	0/0:27,0:27:81.27:0,81,3254	0/0:36,0:36:99:0,108,4228	0/0:18,0:17:54.13:0,54,1849
chr10	2206441	.	ACACAGTCGAG	A	1077.58	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.818;DP=763;FS=0.000;HRun=0;HaplotypeScore=213.6577;InbreedingCoeff=0.9998;MQ=59.13;MQ0=2;MQRankSum=-5.084;QD=38.48;ReadPosRankSum=1.046;VQSLOD=2.9800;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:61,0:61:99:0,175,8692	0/0:14,0:14:42.14:0,42,2057	0/0:33,0:23:62.06:0,62,2834	0/0:33,0:23:69.10:0,69,3151	0/0:28,0:28:81.28:0,81,3862	0/0:34,0:34:96.33:0,96,4878	0/0:24,0:24:72.25:0,72,3731	0/0:27,0:27:75.02:0,75,3175	0/0:23,0:23:69.20:0,69,3343	0/0:26,0:26:78.26:0,78,3651	0/0:20,0:20:54.19:0,54,2725	0/0:26,0:26:78.27:0,78,3853	0/0:25,0:25:72.25:0,72,3638	0/0:22,0:22:66.23:0,66,3480	0/0:25,0:25:75.24:0,75,3794	0/0:22,0:22:66.23:0,66,3406	1/1:8,20:28:36.12:1172,36,0	0/0:26,0:26:75.26:0,75,3868	0/0:20,0:20:60.17:0,60,2810	0/0:23,0:23:69.24:0,69,3307	0/0:34,0:34:99:0,102,4983	0/0:23,0:23:69.24:0,69,3470	0/0:26,0:26:72.72:0,73,3775	0/0:35,0:35:99:0,105,5336	0/0:26,0:26:78.27:0,78,3873	0/0:23,0:23:63.22:0,63,3002	0/0:34,0:34:99:0,102,4987	0/0:22,0:22:63.22:0,63,3360
chr10	2206807	.	A	AT	909.14	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-5.452;DP=585;FS=2.363;HRun=8;HaplotypeScore=52.9209;InbreedingCoeff=0.9382;MQ=70.14;MQ0=0;MQRankSum=-0.625;QD=27.55;ReadPosRankSum=1.270;VQSLOD=4.3251;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:54.01:0,54,490	0/0:8,0:8:17.98:0,18,158	0/0:10,0:9:17.51:0,18,127	0/0:9,0:9:11.19:0,11,131	0/0:38,0:38:95.99:0,96,866	0/0:16,0:16:39.01:0,39,357	0/0:9,0:9:20.98:0,21,186	0/0:20,0:20:48.01:0,48,436	0/0:14,0:14:30.01:0,30,275	0/0:27,0:27:75.04:0,75,685	0/0:28,0:28:75.03:0,75,684	0/0:18,0:18:44.99:0,45,399	0/0:24,0:24:60.02:0,60,546	0/0:21,0:21:57.02:0,57,517	0/0:23,0:23:66.04:0,66,604	0/0:18,0:18:54.03:0,54,494	1/1:2,31:33:87.26:1004,87,0	0/0:16,0:16:39.02:0,39,357	0/0:26,0:26:60.01:0,60,546	0/0:29,0:29:78.03:0,78,709	0/0:19,0:19:45.02:0,45,411	0/0:25,0:26:71.07:0,71,635	0/0:24,0:24:60.02:0,60,547	0/0:9,0:9:27:0,27,242	0/0:28,0:28:81.03:0,81,737	0/0:27,0:27:66.02:0,66,604	0/0:27,0:27:77.98:0,78,696	0/0:17,1:18:19.35:0,19,422
chr10	2208018	.	AT	A	1232.44	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.847;DP=608;FS=0.522;HRun=9;HaplotypeScore=59.9360;InbreedingCoeff=0.9547;MQ=63.04;MQ0=0;MQRankSum=-1.742;QD=20.54;ReadPosRankSum=1.342;VQSLOD=4.2510;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,14:16:39.02:357,39,0	0/0:2,0:2:6.02:0,6,69	0/0:16,0:14:35.31:0,35,375	0/0:9,0:7:18.05:0,18,208	0/0:34,0:34:96.29:0,96,1108	0/0:25,0:25:63.18:0,63,719	0/0:16,0:16:39.12:0,39,450	0/0:44,2:46:65.44:0,65,1261	1/1:3,19:23:59.06:528,59,0	0/0:20,0:20:60.18:0,60,688	0/0:32,0:32:84.24:0,84,961	0/0:20,1:21:32.71:0,33,630	0/0:27,0:27:75.19:0,75,839	0/0:13,0:13:33.10:0,33,381	0/0:34,0:35:99:0,102,1148	0/0:20,0:19:57.16:0,57,650	1/1:2,19:21:51.78:490,52,0	0/0:12,0:12:30.09:0,30,346	0/0:29,0:29:63.16:0,63,714	0/0:24,0:25:66.03:0,66,742	0/0:16,0:16:42.12:0,42,485	0/0:18,0:18:51.09:0,51,564	0/0:25,0:25:47.54:0,48,758	0/0:15,0:15:39.07:0,39,435	0/0:17,0:17:42.11:0,42,474	0/0:32,0:32:93.28:0,93,1073	0/0:29,0:29:81.24:0,81,935	0/0:13,1:14:14.64:0,15,413
chr10	2210514	.	A	AGCGGCG	1333.12	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.855;DP=536;FS=2.360;HRun=0;HaplotypeScore=113.6497;InbreedingCoeff=0.9852;MQ=94.26;MQ0=0;MQRankSum=-6.318;QD=60.60;ReadPosRankSum=1.454;VQSLOD=4.1253;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,132,3074	0/0:6,0:6:18.06:0,18,433	0/0:30,0:30:78.27:0,78,1828	0/0:26,0:26:69.07:0,69,1416	0/0:15,0:15:36.12:0,36,866	0/0:8,0:8:21.07:0,21,483	0/0:20,0:20:60.21:0,60,1424	0/0:22,0:22:60.20:0,60,1380	0/0:16,0:16:48.16:0,48,1154	0/0:12,0:12:36.12:0,36,807	0/0:12,0:12:30.10:0,30,721	0/0:19,0:19:57.20:0,57,1347	0/0:17,0:17:51.18:0,51,1201	0/0:17,0:17:51.16:0,51,1155	0/0:20,0:20:57.18:0,57,1321	0/0:12,0:12:36.11:0,36,818	1/1:6,15:22:42.14:1428,42,0	0/0:31,0:31:87.25:0,87,1941	0/0:17,0:17:51.17:0,51,1180	0/0:14,0:14:42.13:0,42,940	0/0:36,0:36:99:0,105,2513	0/0:23,0:23:69.21:0,69,1520	0/0:17,0:17:45.13:0,45,988	0/0:16,0:16:48.16:0,48,1127	0/0:21,0:21:60.17:0,60,1347	0/0:15,0:15:45.15:0,45,1038	0/0:19,0:19:54.17:0,54,1251	0/0:8,0:8:24.08:0,24,562
chr10	2211605	.	TTGTG	T	417.59	PASS	AB=0.990;AC=11;AF=0.212;AN=52;BaseQRankSum=3.447;DP=563;FS=6.170;HRun=0;HaplotypeScore=101.3373;InbreedingCoeff=0.5370;MQ=65.71;MQ0=13;MQRankSum=-0.063;QD=3.34;ReadPosRankSum=1.010;VQSLOD=1.5323;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:26:17.90:0,18,272	0/0:7,0:7:11.31:0,11,126	./.	./.	0/0:12,0:12:14.37:0,14,183	0/0:19,0:18:20.98:0,21,347	0/0:20,0:21:25.80:0,26,327	0/0:27,0:26:5.84:0,6,35	1/1:10,6:16:18.05:249,18,0	0/0:33,0:33:33.93:0,34,538	0/0:8,0:8:3.01:0,3,45	0/0:27,0:27:25.13:0,25,423	0/1:17,0:17:3.33:3,0,163	0/0:17,0:17:24.07:0,24,459	0/0:14,0:14:15:0,15,153	0/0:13,0:12:20.53:0,21,318	1/1:21,0:20:2.01:102,2,0	0/0:21,0:21:34.84:0,35,404	0/0:27,0:27:17.83:0,18,230	0/0:19,0:19:30.03:0,30,547	0/0:39,0:35:29.81:0,30,447	0/0:20,0:20:37.62:0,38,512	0/0:16,0:16:21.07:0,21,414	0/1:33,1:33:11.96:12,0,405	0/0:12,0:12:15.50:0,16,248	1/1:14,0:14:10.62:92,11,0	0/1:16,0:15:4.97:63,0,5	1/1:6,0:6:3.01:41,3,0
chr10	2212749	.	CT	C	230	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.783;DP=624;FS=0.000;HRun=4;HaplotypeScore=64.4723;InbreedingCoeff=0.9974;MQ=83.58;MQ0=0;MQRankSum=-1.775;QD=23.00;ReadPosRankSum=0.585;VQSLOD=2.5748;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,108,1511	0/0:11,0:11:30.10:0,30,420	0/0:24,0:24:66.17:0,66,877	0/0:16,0:17:44.93:0,45,579	0/0:33,0:33:93.31:0,93,1302	0/0:27,0:27:81.24:0,81,1095	0/0:12,0:12:30.10:0,30,419	0/0:27,0:27:75.24:0,75,1021	1/1:0,10:10:27.08:324,27,0	0/0:23,0:23:69.23:0,69,951	0/0:27,0:27:78.26:0,78,1092	0/0:25,0:25:72.18:0,72,938	0/0:24,0:24:66.21:0,66,906	0/0:23,0:23:63.20:0,63,867	0/0:23,0:23:66.21:0,66,907	0/0:21,0:21:54.18:0,54,756	0/0:32,0:32:96.28:0,96,1322	0/0:18,0:18:45.15:0,45,630	0/0:28,0:28:75.23:0,75,1019	0/0:25,0:25:69.23:0,69,966	0/0:21,0:21:63.21:0,63,881	0/0:20,0:20:57.18:0,57,781	0/0:17,0:17:51.17:0,51,714	0/0:17,0:17:51.16:0,51,698	0/0:17,0:17:51.15:0,51,696	0/0:18,0:18:54.18:0,54,756	0/0:35,0:35:99:0,105,1470	0/0:10,0:10:30.10:0,30,420
chr10	2213216	.	TC	T	956.69	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.636;DP=781;FS=4.738;HRun=2;HaplotypeScore=71.8942;InbreedingCoeff=0.9996;MQ=68.25;MQ0=0;MQRankSum=-1.961;QD=34.17;ReadPosRankSum=0.196;VQSLOD=3.8425;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:58:99:0,172,2532	0/0:11,0:11:33.11:0,33,494	0/0:19,0:19:54.18:0,54,778	0/0:30,0:30:90.28:0,90,1311	0/0:29,0:29:87.28:0,87,1281	0/0:15,0:15:45.15:0,45,674	0/0:26,0:26:78.26:0,78,1164	0/0:30,0:30:87.29:0,87,1285	0/0:33,0:33:99:0,99,1462	0/0:29,0:29:81.27:0,81,1213	0/0:22,0:22:63.21:0,63,943	0/0:23,0:23:69.23:0,69,1024	0/0:28,0:28:84.27:0,84,1237	0/0:30,0:30:87.26:0,87,1263	0/0:37,0:37:99:0,111,1624	0/0:17,0:17:48.16:0,48,719	1/1:0,28:28:81.26:1052,81,0	0/0:13,0:13:39.13:0,39,585	0/0:16,0:16:48.15:0,48,691	0/0:30,0:30:90.29:0,90,1329	0/0:59,0:59:99:0,175,2599	0/0:27,0:27:81.27:0,81,1196	0/0:28,0:28:78.26:0,78,1165	0/0:34,0:34:99:0,102,1508	0/0:20,0:20:60.20:0,60,898	0/0:40,0:40:99:0,120,1798	0/0:35,0:35:99:0,105,1569	0/0:14,0:14:42.14:0,42,622
chr10	2215060	.	CT	C	789.14	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.416;DP=628;FS=0.651;HRun=5;HaplotypeScore=73.7505;InbreedingCoeff=0.9027;MQ=76.15;MQ0=6;MQRankSum=-0.248;QD=26.30;ReadPosRankSum=0.278;VQSLOD=3.1715;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,30:30:78.22:884,78,0	0/0:4,0:4:9.03:0,9,123	0/0:54,1:30:9.96:0,10,375	0/0:65,0:30:38.54:0,39,523	0/0:18,0:18:51.16:0,51,682	0/0:19,0:19:54.17:0,54,722	0/0:19,0:19:54.18:0,54,738	0/0:24,0:25:57.18:0,57,764	0/0:19,0:19:57.19:0,57,775	0/0:29,0:29:78.26:0,78,1065	0/0:16,0:16:48.16:0,48,654	0/0:12,0:12:29.89:0,30,382	0/0:24,0:24:63.21:0,63,860	0/0:15,0:15:45.15:0,45,615	0/0:24,0:24:66.19:0,66,857	0/0:28,0:28:74.72:0,75,977	0/0:20,0:20:60.20:0,60,819	0/0:12,1:14:36.59:0,37,490	0/0:12,0:12:30.09:0,30,398	0/0:17,0:17:51.17:0,51,696	0/0:25,0:25:58.92:0,59,875	0/0:20,0:20:57.19:0,57,779	0/0:18,0:18:54.18:0,54,738	0/0:25,0:25:69.23:0,69,941	0/0:25,0:25:72.24:0,72,977	0/0:23,0:23:69.23:0,69,942	0/0:15,0:15:32.02:0,32,507	0/0:12,0:12:36.12:0,36,492
chr10	2216226	.	G	GC	4748.04	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.781;DP=692;FS=2.897;HRun=0;HaplotypeScore=83.2517;InbreedingCoeff=0.9999;MQ=90.72;MQ0=0;MQRankSum=-4.606;QD=40.93;ReadPosRankSum=4.196;VQSLOD=5.5307;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,60:61:99:2638,165,0	0/0:13,0:13:39.11:0,39,525	0/0:30,0:30:90.29:0,90,1235	0/0:24,0:24:72.24:0,72,990	0/0:24,0:23:57.19:0,57,794	0/0:16,0:16:45.15:0,45,629	0/0:36,0:36:99:0,108,1510	0/0:28,0:28:81.25:0,81,1102	1/1:0,23:23:57.19:911,57,0	0/0:25,0:25:75.24:0,75,1020	0/0:14,0:14:42.12:0,42,569	0/0:22,0:22:66.22:0,66,922	0/0:29,0:29:81.27:0,81,1132	0/0:26,0:26:78.26:0,78,1091	0/0:14,0:14:42.14:0,42,587	0/0:19,0:19:57.18:0,57,779	1/1:1,31:32:75.26:1199,75,0	0/0:18,0:18:54.18:0,54,755	0/0:25,0:25:69.18:0,69,927	0/0:17,0:17:51.17:0,51,713	0/0:57,0:57:99:0,172,2336	0/0:21,0:21:60.19:0,60,822	0/0:15,0:15:42.14:0,42,587	0/0:29,0:29:87.28:0,87,1200	0/0:19,0:19:57.19:0,57,797	0/0:17,0:17:48.16:0,48,671	0/0:26,0:26:78.25:0,78,1073	0/0:12,0:12:36.12:0,36,503
chr10	2217078	.	TTG	T	303.82	PASS	AB=0.892;AC=19;AF=0.380;AN=50;BaseQRankSum=4.306;DP=711;FS=0.000;HRun=0;HaplotypeScore=123.6478;InbreedingCoeff=-0.1298;MQ=54.14;MQ0=23;MQRankSum=0.355;QD=0.81;ReadPosRankSum=1.008;VQSLOD=2.2809;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:31:0.81:6,1,0	0/1:6,2:8:23.74:24,0,80	./.	./.	0/1:13,1:13:20.37:20,0,111	0/0:21,0:20:8.49:0,8,342	0/0:35,0:34:21.01:0,21,281	0/0:37,0:35:0.89:0,1,2	1/1:8,0:16:2.97:15,3,0	0/1:30,0:29:27.41:27,0,155	1/1:15,1:15:2.59:10,3,0	0/0:25,0:23:27.09:0,27,399	0/0:21,0:21:24.04:0,24,311	0/1:24,3:28:99:132,0,148	0/1:19,3:22:78.22:78,0,273	0/0:28,4:31:3.67:0,4,405	1/1:13,0:26:5.23:21,5,0	0/0:32,0:31:32.92:0,33,382	0/0:24,0:23:11.40:0,11,138	0/0:17,0:17:6:0,6,67	0/1:66,2:67:12.21:12,0,479	0/1:12,2:14:26.36:26,0,36	0/1:18,1:19:9.55:10,0,209	0/1:40,6:46:38.04:38,0,565	0/1:13,1:14:20.38:20,0,118	0/0:16,0:15:2.98:0,3,22	0/1:9,0:15:6.99:7,0,14	./.
chr10	2218188	.	TGTGTGTGTGTC	T	5410.83	PASS	AB=0.978;AC=27;AF=0.482;AN=56;BaseQRankSum=-0.595;DP=697;FS=25.940;HRun=0;HaplotypeScore=207.6097;InbreedingCoeff=-0.5337;MQ=56.70;MQ0=26;MQRankSum=-1.144;QD=9.46;ReadPosRankSum=-0.666;VQSLOD=2.4183;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:25:99:399,0,296	0/0:8,0:8:16.87:0,17,432	0/0:45,0:13:36.46:0,36,346	0/0:53,0:21:41.22:0,41,416	0/1:25,0:24:99:174,0,852	0/1:21,0:19:48.06:48,0,906	0/1:28,0:26:35.84:36,0,360	1/1:15,0:13:29.32:413,29,0	0/0:19,0:18:6.25:0,6,173	0/1:22,0:22:99:242,0,562	0/1:21,0:20:99:118,0,623	0/1:26,0:24:99:168,0,1118	0/1:21,0:20:64.79:65,0,737	0/1:23,0:23:95.79:96,0,664	0/1:33,0:33:99:225,0,1654	0/1:25,0:25:99:149,0,1162	0/1:21,0:21:62.12:62,0,217	0/1:28,0:22:99:119,0,854	0/1:19,0:18:77.36:77,0,459	0/1:15,0:15:99:191,0,414	0/1:54,0:51:99:100,0,2288	0/1:24,0:23:99:191,0,949	0/1:15,0:15:39.57:40,0,606	0/1:38,0:37:99:154,0,1783	0/1:18,0:17:99:100,0,814	0/1:4,24:27:36.07:1671,0,36	1/1:1,14:15:15.05:350,15,0	1/1:0,9:9:6.02:223,6,0
chr10	2218194	.	TGTGTC	T	8068.11	PASS	AB=0.994;AC=34;AF=0.607;AN=56;BaseQRankSum=-2.313;DP=676;FS=22.811;HRun=0;HaplotypeScore=143.5929;InbreedingCoeff=-0.6359;MQ=65.84;MQ0=25;MQRankSum=-2.470;QD=11.94;ReadPosRankSum=1.714;VQSLOD=2.5508;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:24:75.87:511,0,76	0/1:9,0:9:4.61:5,0,85	0/1:50,0:18:73.96:74,0,356	0/1:60,0:28:99:130,0,409	0/1:21,0:20:90.33:311,0,90	0/1:17,2:18:99:184,0,188	0/1:24,1:23:42.35:42,0,67	1/1:18,0:15:41.12:530,41,0	1/1:3,15:16:12.04:261,12,0	0/1:18,0:18:17.07:385,0,17	0/1:18,0:17:99:192,0,120	0/1:29,0:27:99:401,0,223	0/1:23,0:21:99:183,0,109	0/1:23,0:23:99:396,0,131	0/1:31,0:31:99:311,0,447	0/1:24,0:24:99:357,0,257	1/1:5,15:20:27.07:473,27,0	0/1:30,0:24:99:322,0,163	0/1:12,0:12:55.72:222,0,56	0/1:15,0:15:99:212,0,130	0/1:49,0:46:99:407,0,484	0/1:24,0:23:99:272,0,264	0/1:11,0:11:25.27:181,0,25	0/1:35,0:34:99:299,0,433	0/1:16,0:15:99:188,0,197	1/1:27,0:27:38.80:937,39,0	1/1:15,0:15:12.51:182,13,0	1/1:9,0:9:6.02:99,6,0
chr10	2218196	.	TGTC	T	9690.57	PASS	AB=0.910;AC=43;AF=0.768;AN=56;BaseQRankSum=-5.953;DP=658;FS=5.393;HRun=0;HaplotypeScore=120.1891;InbreedingCoeff=-0.3150;MQ=68.62;MQ0=25;MQRankSum=-1.826;QD=14.73;ReadPosRankSum=0.786;VQSLOD=4.3219;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:25:23.74:550,0,24	0/1:4,5:9:18.27:89,0,18	0/1:53,0:21:99:190,0,347	0/1:60,0:28:99:140,0,405	1/1:18,2:19:24.34:390,24,0	0/1:17,2:18:26.49:303,0,26	0/1:7,17:22:11.47:46,0,11	1/1:20,0:17:47.74:615,48,0	1/1:18,0:16:12.04:148,12,0	1/1:18,0:18:41.31:597,41,0	1/1:17,0:16:19.29:260,19,0	1/1:25,1:24:2.08:446,2,0	1/1:18,0:16:16.19:301,16,0	1/1:19,0:19:12.39:425,12,0	1/1:27,1:28:4.88:428,5,0	0/1:21,1:22:19.95:367,0,20	1/1:19,1:20:27.08:349,27,0	0/1:27,3:25:10.13:417,0,10	1/1:10,0:10:15.60:247,16,0	0/1:13,1:14:33.84:283,0,34	0/1:43,2:44:18.97:583,0,19	0/1:24,1:24:38.72:536,0,39	1/1:11,1:12:22.22:295,22,0	0/1:35,0:34:1.54:392,0,2	0/1:16,0:15:13:231,0,13	1/1:27,0:27:65.19:839,65,0	1/1:15,0:15:12.04:154,12,0	1/1:9,0:9:6.02:71,6,0
chr10	2218198	.	TC	T	13910.02	PASS	AB=0.912;AC=54;AF=0.964;AN=56;BaseQRankSum=-5.423;DP=604;FS=10.130;HRun=1;HaplotypeScore=84.9203;InbreedingCoeff=-0.0460;MQ=71.23;MQ0=21;MQRankSum=-2.440;QD=23.03;ReadPosRankSum=3.187;VQSLOD=4.0229;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,20:21:34.97:606,35,0	1/1:5,2:7:9.01:106,9,0	0/1:48,6:22:99:190,0,347	0/1:55,5:28:99:136,0,405	1/1:2,16:17:45.04:582,45,0	1/1:7,10:18:47.51:508,48,0	1/1:20,2:21:17.92:169,18,0	1/1:1,19:17:48.15:668,48,0	1/1:15,2:16:11.96:96,12,0	1/1:0,21:21:63.10:782,63,0	1/1:0,15:16:42.12:568,42,0	1/1:4,18:20:45.02:642,45,0	1/1:2,15:15:39.13:543,39,0	1/1:0,15:15:42.14:586,42,0	1/1:1,21:22:63.15:838,63,0	1/1:1,19:21:60.14:776,60,0	1/1:18,2:20:26.96:268,27,0	1/1:3,23:22:51.12:655,51,0	1/1:0,9:9:21.04:293,21,0	1/1:1,10:11:27.04:354,27,0	1/1:4,34:39:87.06:1094,87,0	1/1:6,16:21:53.42:675,53,0	1/1:1,11:12:27.07:353,27,0	1/1:0,26:25:69.15:938,69,0	1/1:1,12:13:39.04:501,39,0	1/1:25,2:27:71.99:817,72,0	1/1:14,1:15:11.98:126,12,0	1/1:9,0:9:5.97:43,6,0
chr10	2218920	.	A	AT	443.65	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.788;DP=614;FS=10.135;HRun=8;HaplotypeScore=67.4779;InbreedingCoeff=0.9903;MQ=66.95;MQ0=5;MQRankSum=-0.971;QD=19.29;ReadPosRankSum=-1.481;VQSLOD=2.4581;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,102,912	0/0:10,0:10:30:0,30,270	0/0:21,0:12:29.54:0,30,239	0/0:26,0:13:23.95:0,24,213	0/0:29,0:29:75:0,75,681	0/0:27,0:27:69.03:0,69,631	0/0:28,0:28:72.03:0,72,659	0/0:26,0:26:69.02:0,69,629	0/0:14,0:14:38.98:0,39,347	0/0:21,0:21:51.02:0,51,464	0/0:24,0:24:63:0,63,571	0/0:16,0:16:39.02:0,39,357	0/0:9,0:9:20.96:0,21,180	0/0:18,0:18:51.01:0,51,461	0/0:16,0:16:42:0,42,377	0/0:9,0:9:24.01:0,24,220	1/1:2,20:23:50.48:539,50,0	0/0:33,0:33:87.04:0,87,796	0/0:27,0:26:66.03:0,66,604	0/0:22,0:22:63.02:0,63,572	0/0:27,0:27:72.02:0,72,658	0/0:17,0:17:42.02:0,42,384	0/0:25,0:25:60.02:0,60,549	0/0:30,0:30:78.04:0,78,714	0/0:25,0:25:65.97:0,66,590	0/0:20,0:20:51.02:0,51,467	0/0:19,0:19:51.01:0,51,460	0/0:13,0:13:33.01:0,33,302
chr10	2218953	.	G	GT	2060.19	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=-9.680;DP=595;FS=4.413;HRun=8;HaplotypeScore=58.8457;InbreedingCoeff=0.9127;MQ=62.33;MQ0=4;MQRankSum=-1.580;QD=21.46;ReadPosRankSum=-0.922;VQSLOD=3.5619;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,126,1132	0/0:10,0:10:30.02:0,30,275	0/1:22,0:13:1.66:2,0,185	0/0:23,0:11:15.59:0,16,160	0/0:36,0:36:93.03:0,93,851	0/0:23,0:23:63.01:0,63,570	0/0:25,0:25:60.03:0,60,549	1/1:4,19:22:57.12:625,57,0	0/0:15,0:15:42.02:0,42,384	0/0:20,0:21:59.06:0,59,525	0/0:22,0:22:54.02:0,54,491	0/0:11,0:11:23.99:0,24,212	0/0:10,0:10:30.02:0,30,274	0/0:20,0:20:48:0,48,435	0/0:19,0:19:51.01:0,51,463	0/0:8,0:8:21.01:0,21,192	0/0:23,0:23:60.02:0,60,548	0/0:22,0:22:57.03:0,57,521	0/0:19,0:18:41.98:0,42,372	0/0:34,0:34:72.21:0,72,798	0/0:22,0:22:57.02:0,57,522	0/0:22,0:22:63.03:0,63,572	0/0:21,0:21:63.02:0,63,572	0/0:29,0:29:75.02:0,75,681	0/0:15,0:15:35.98:0,36,323	1/1:1,20:21:43.13:659,43,0	1/1:0,21:21:54.16:623,54,0	1/1:0,9:9:27.08:312,27,0
chr10	2219526	.	A	AT	808.85	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.031;DP=720;FS=0.780;HRun=2;HaplotypeScore=75.6125;InbreedingCoeff=0.9998;MQ=83.73;MQ0=0;MQRankSum=-4.567;QD=32.35;ReadPosRankSum=3.135;VQSLOD=3.5718;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:70.39:0,70,269	0/0:13,0:13:36.09:0,36,431	0/0:25,0:25:63.15:0,63,735	0/0:17,0:17:48.05:0,48,523	0/0:33,0:33:99:0,99,1227	0/0:18,0:18:54.17:0,54,669	0/0:20,0:20:60.19:0,60,743	0/0:38,0:38:99:0,105,1271	0/0:26,0:26:60.79:0,61,238	0/0:35,0:35:99:0,102,1250	0/0:28,0:28:75.23:0,75,930	0/0:17,0:17:48.15:0,48,595	0/0:22,0:22:60.19:0,60,743	0/0:20,0:20:60.18:0,60,731	0/0:23,0:23:69.20:0,69,843	0/0:27,0:27:77.61:0,78,938	1/1:2,23:25:68.17:904,68,0	0/0:17,0:17:45.14:0,45,558	0/0:19,0:19:54.17:0,54,669	0/0:30,0:30:87.27:0,87,1078	0/0:35,0:35:96.30:0,96,1187	0/0:29,0:29:84.26:0,84,1042	0/0:32,0:32:93.28:0,93,1135	0/0:16,0:16:48.15:0,48,595	0/0:38,0:38:99:0,111,1376	0/0:29,0:29:84.26:0,84,1030	0/0:44,0:44:99:0,117,1446	0/0:15,0:15:45.10:0,45,529
chr10	2219529	.	C	CA	2932.05	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-4.578;DP=726;FS=0.436;HRun=3;HaplotypeScore=66.7836;InbreedingCoeff=0.9998;MQ=82.57;MQ0=0;MQRankSum=-3.750;QD=35.33;ReadPosRankSum=3.114;VQSLOD=4.2875;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,29:30:84.28:1176,84,0	0/0:11,0:11:33.09:0,33,385	0/0:24,0:24:66.17:0,66,761	0/0:16,0:16:39.08:0,39,433	0/0:34,0:34:99:0,102,1198	0/0:20,0:20:57.16:0,57,673	0/0:20,0:20:54.13:0,54,624	0/0:38,0:38:99:0,102,1206	1/1:2,23:25:39.24:967,39,0	0/0:34,0:34:96.29:0,96,1144	0/0:28,0:28:81.23:0,81,960	0/0:18,0:18:54.15:0,54,635	0/0:22,0:22:57.16:0,57,671	0/0:20,0:20:57.17:0,57,684	0/0:22,0:22:60.18:0,60,720	0/0:28,1:29:39.24:0,39,894	1/1:27,0:27:71.21:932,71,0	0/0:16,0:16:45.14:0,45,540	0/0:22,0:22:57.17:0,57,680	0/0:30,0:30:87.27:0,87,1044	0/0:34,0:34:96.27:0,96,1138	0/0:28,0:28:84.25:0,84,997	0/0:33,0:34:86.46:0,86,1004	0/0:17,0:17:51.16:0,51,612	0/0:38,0:38:99:0,114,1347	0/0:28,0:28:75.22:0,75,891	0/0:44,0:44:99:0,126,1497	0/0:16,0:16:48.13:0,48,564
chr10	2221007	.	A	ATT	101.93	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.527;DP=513;FS=9.944;HRun=0;HaplotypeScore=59.3048;InbreedingCoeff=0.8559;MQ=65.06;MQ0=8;MQRankSum=-4.419;QD=16.99;ReadPosRankSum=0.736;VQSLOD=2.7894;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:84.29:0,84,1368	0/0:5,0:5:15.04:0,15,218	0/0:18,0:14:39.10:0,39,567	0/0:15,0:8:24.08:0,24,376	0/0:19,0:19:54.17:0,54,851	0/0:15,0:15:42.14:0,42,685	0/0:34,0:34:96.30:0,96,1517	0/0:23,0:18:39.13:0,39,636	1/1:0,6:6:18.04:192,18,0	0/0:19,0:18:48.16:0,48,783	0/0:13,0:13:35.73:0,36,587	0/0:23,0:23:69.24:0,69,1122	0/0:15,0:15:42.14:0,42,682	0/0:19,0:19:51.17:0,51,832	0/0:18,0:18:51.17:0,51,832	0/0:15,0:15:45.15:0,45,731	0/0:22,0:22:66.23:0,66,1077	0/0:23,0:22:63.22:0,63,1028	0/0:21,0:20:51.13:0,51,800	0/0:27,0:27:78.27:0,78,1272	0/0:26,0:26:72.25:0,72,1174	0/0:16,0:16:48.16:0,48,783	0/0:12,0:12:36.12:0,36,587	0/0:20,0:20:57.19:0,57,927	0/0:9,0:8:24.06:0,24,366	0/0:21,0:20:60.20:0,60,978	0/0:26,0:25:72.23:0,72,1138	0/0:3,0:3:4.52:0,5,71
chr10	2221008	.	G	GGC	128.28	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.209;DP=515;FS=9.957;HRun=0;HaplotypeScore=59.4451;InbreedingCoeff=0.9194;MQ=65.95;MQ0=8;MQRankSum=-4.042;QD=21.38;ReadPosRankSum=1.189;VQSLOD=3.1278;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:84.29:0,84,1370	0/0:5,0:5:15.05:0,15,242	0/0:19,0:15:42.12:0,42,620	0/0:15,0:8:24.08:0,24,392	0/0:18,0:18:51.17:0,51,831	0/0:15,0:15:42.14:0,42,682	0/0:35,0:35:99:0,99,1579	0/0:23,0:18:42.13:0,42,663	1/1:0,6:6:18.06:219,18,0	0/0:19,0:18:51.17:0,51,811	0/0:13,0:13:36.59:0,37,588	0/0:23,0:23:69.24:0,69,1124	0/0:15,0:15:42.13:0,42,660	0/0:19,0:19:51.17:0,51,832	0/0:18,0:18:54.17:0,54,856	0/0:15,0:15:45.15:0,45,731	0/0:22,0:22:66.23:0,66,1074	0/0:22,0:21:63.22:0,63,1027	0/0:21,0:20:48.16:0,48,783	0/0:28,0:28:78.27:0,78,1270	0/0:26,0:26:72.25:0,72,1175	0/0:17,0:17:48.16:0,48,783	0/0:12,0:12:36.12:0,36,587	0/0:20,0:20:57.19:0,57,930	0/0:9,0:8:24.08:0,24,388	0/0:21,0:20:60.20:0,60,978	0/0:26,0:25:75.24:0,75,1194	0/0:3,0:3:9.03:0,9,128
chr10	2221010	.	T	TG	224.55	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.851;DP=524;FS=5.618;HRun=0;HaplotypeScore=52.5631;InbreedingCoeff=0.8880;MQ=67.66;MQ0=6;MQRankSum=-4.746;QD=24.95;ReadPosRankSum=0.203;VQSLOD=4.4141;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:87.27:0,87,1197	0/0:5,0:5:15.05:0,15,210	0/0:19,0:15:42.12:0,42,547	0/0:17,0:10:30.05:0,30,379	0/0:18,0:18:51.17:0,51,712	0/0:14,0:14:39.13:0,39,545	0/0:35,0:35:99:0,99,1367	0/0:22,0:17:42.14:0,42,587	1/1:3,6:8:24.08:318,24,0	0/0:19,0:18:51.17:0,51,713	0/0:14,0:14:39.11:0,39,527	0/0:23,0:23:69.23:0,69,964	0/0:15,0:15:39.13:0,39,546	0/0:19,0:19:51.17:0,51,713	0/0:19,0:19:54.18:0,54,755	0/0:14,0:14:42.14:0,42,588	0/0:22,0:22:66.20:0,66,905	0/0:21,0:21:63.21:0,63,875	0/0:22,0:21:51.17:0,51,713	0/0:27,0:27:78.25:0,78,1066	0/0:26,0:26:72.24:0,72,1007	0/0:17,0:17:51.16:0,51,696	0/0:14,0:14:36.12:0,36,503	0/0:21,0:21:57.19:0,57,797	0/0:9,0:8:24.08:0,24,336	0/0:20,0:20:60.20:0,60,839	0/0:29,0:28:75.25:0,75,1043	0/0:3,0:3:6.02:0,6,84
chr10	2221767	.	A	ACTCTCT	3791.65	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=6.972;DP=695;FS=1.089;HRun=0;HaplotypeScore=161.4634;InbreedingCoeff=0.9154;MQ=61.63;MQ0=15;MQRankSum=-7.855;QD=20.06;ReadPosRankSum=-3.926;VQSLOD=2.8484;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:28:2.75:99,3,0	0/0:3,0:3:6:0,6,83	0/0:57,0:18:14.57:0,15,215	0/0:65,0:23:17.76:0,18,332	0/0:17,0:17:27.09:0,27,514	0/0:16,0:16:36.12:0,36,741	0/0:27,0:27:57.58:0,58,993	1/1:33,0:31:48.08:902,48,0	1/1:21,0:24:6.02:155,6,0	0/0:29,0:28:63.20:0,63,1233	0/0:12,0:12:24.04:0,24,456	0/0:15,0:15:32.39:0,32,615	0/0:17,0:18:27.08:0,27,467	0/0:21,0:21:45.12:0,45,825	0/0:27,0:27:39.60:0,40,766	0/0:23,0:23:32.62:0,33,633	1/1:15,11:28:23.91:553,24,0	0/0:17,0:16:21.78:0,22,561	0/0:20,0:20:14.12:0,14,350	0/0:16,0:18:25.90:0,26,500	0/0:31,0:29:38.69:0,39,718	0/0:17,0:18:19.58:0,20,494	0/0:14,0:14:30.07:0,30,566	0/0:40,0:41:68.97:0,69,1304	0/0:16,0:15:21.02:0,21,345	1/1:23,1:22:42.14:955,42,0	1/1:30,0:29:30.75:491,31,0	1/1:20,0:20:32.94:637,33,0
chr10	2223075	.	GACACACAC	G	636.65	PASS	AB=0.906;AC=10;AF=0.185;AN=54;BaseQRankSum=5.207;DP=595;FS=0.887;HRun=0;HaplotypeScore=151.7031;InbreedingCoeff=0.5634;MQ=67.61;MQ0=13;MQRankSum=0.974;QD=5.63;ReadPosRankSum=-0.773;VQSLOD=2.6549;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:24:3.01:0,3,119	0/0:8,0:8:12.02:0,12,266	./.	0/0:31,0:23:3.01:0,3,40	0/0:17,0:20:21.07:0,21,726	0/1:21,0:23:41.93:42,0,836	0/0:26,0:27:48.15:0,48,1398	0/1:20,6:26:4.22:147,0,4	0/0:20,0:20:4.48:0,4,37	0/0:24,0:25:41.32:0,41,1146	0/0:19,0:19:33.07:0,33,1035	0/0:11,0:24:14.98:0,15,161	0/0:12,0:12:21.07:0,21,610	0/0:22,0:24:42.14:0,42,1316	0/0:23,0:23:36.11:0,36,1140	0/0:14,0:14:27.08:0,27,841	1/1:18,0:19:6.90:84,7,0	0/0:16,0:18:33.11:0,33,1154	0/0:14,0:14:15.05:0,15,562	0/0:15,0:15:15.05:0,15,481	0/0:43,0:42:60.60:0,61,1732	0/0:19,0:19:30.10:0,30,975	0/0:14,0:15:18.06:0,18,611	0/0:34,0:37:51.16:0,51,1697	0/0:19,0:19:37.01:0,37,1123	1/1:10,9:19:27.43:358,27,0	1/1:10,9:19:2.57:75,3,0	1/1:2,4:5:3.01:75,3,0
chr10	2225178	.	GCA	G	1315.24	PASS	AB=0.898;AC=15;AF=0.278;AN=54;BaseQRankSum=8.968;DP=767;FS=4.840;HRun=0;HaplotypeScore=105.2681;InbreedingCoeff=0.1556;MQ=58.86;MQ0=7;MQRankSum=0.911;QD=3.90;ReadPosRankSum=1.537;VQSLOD=2.3858;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:17,28:47:47.97:547,48,0	0/0:17,0:17:38.77:0,39,527	0/0:11,0:3:0:0,0,0	./.	0/1:26,4:30:66.95:67,0,891	0/0:10,0:11:30.09:0,30,452	0/1:36,2:37:87.67:88,0,737	0/0:24,1:25:12.57:0,13,626	1/1:7,11:21:29.75:312,30,0	0/0:34,2:36:7.14:0,7,1056	0/1:18,6:23:99:127,0,513	0/0:30,0:30:73.78:0,74,1113	0/0:29,1:30:38.37:0,38,1085	0/0:40,2:42:31.22:0,31,1374	0/1:22,3:25:52.46:52,0,653	0/0:19,0:19:39.13:0,39,612	1/1:30,0:30:18.16:124,18,0	0/1:28,2:31:39.59:40,0,918	0/1:22,2:22:29.03:29,0,469	0/0:24,4:28:54.13:0,54,786	0/0:53,7:59:2.27:0,2,1897	0/0:25,1:26:57.16:0,57,857	0/0:21,0:21:42.09:0,42,591	0/0:45,0:46:84.29:0,84,1316	0/1:29,3:31:54.16:54,0,961	0/1:21,3:24:38.67:39,0,830	0/0:15,0:16:33.10:0,33,497	0/1:10,1:11:2.44:2,0,427
chr10	2225198	.	ACACG	A	643.33	PASS	AB=0.985;AC=4;AF=0.071;AN=56;BaseQRankSum=6.634;DP=837;FS=7.838;HRun=0;HaplotypeScore=151.0480;InbreedingCoeff=0.4955;MQ=58.83;MQ0=11;MQRankSum=0.715;QD=8.25;ReadPosRankSum=0.060;VQSLOD=2.1134;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:26.62:0,27,436	0/0:15,0:15:28.05:0,28,801	0/0:30,0:7:8.02:0,8,106	0/1:31,0:12:4.66:5,0,163	0/0:37,0:37:99:0,102,1884	0/0:20,0:19:53.93:0,54,955	0/0:37,0:36:44.63:0,45,1336	0/0:30,0:30:77.56:0,78,1253	0/1:20,0:20:9.12:9,0,263	0/0:30,0:30:87.16:0,87,1898	0/0:22,0:21:54.03:0,54,1063	0/0:31,0:31:85.09:0,85,1839	0/0:32,0:32:96.15:0,96,2016	0/0:44,0:44:99:0,111,2517	0/0:27,0:27:74.96:0,75,1387	0/0:21,0:21:54.04:0,54,1097	1/1:4,21:25:38.08:735,38,0	0/0:30,0:30:53.33:0,53,1717	0/0:27,0:23:59.19:0,59,1031	0/0:26,0:26:54.14:0,54,1285	0/0:82,0:81:99:0,210,3962	0/0:29,0:29:79.73:0,80,1724	0/0:21,0:21:48.03:0,48,980	0/0:43,0:43:99:0,105,2323	0/0:33,0:32:89.77:0,90,1830	0/0:30,0:30:71.14:0,71,1587	0/0:13,0:13:38.97:0,39,834	0/0:14,0:14:41.98:0,42,834
chr10	2225294	.	C	CAT	2567.97	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-1.987;DP=871;FS=0.534;HRun=0;HaplotypeScore=113.1972;InbreedingCoeff=0.8945;MQ=53.48;MQ0=23;MQRankSum=0.832;QD=32.51;ReadPosRankSum=1.684;VQSLOD=5.5884;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,29:34:60.98:1252,61,0	0/0:13,0:13:39.06:0,39,550	0/0:52,0:4:2.19:0,2,88	0/0:60,0:9:5.13:0,5,214	0/0:26,0:25:75.08:0,75,1030	0/0:24,0:24:69.17:0,69,1020	0/0:37,0:36:96.20:0,96,1448	0/0:39,0:37:99:0,108,1372	1/1:2,21:24:42.54:849,43,0	0/0:21,0:21:57.09:0,57,823	0/0:23,0:23:60.06:0,60,934	0/0:24,0:24:72.16:0,72,1122	0/0:25,0:25:65.99:0,66,910	0/0:24,0:24:71.76:0,72,1017	0/0:29,0:29:81.07:0,81,1117	0/0:25,0:25:75.12:0,75,1123	1/1:9,12:20:24.92:608,25,0	0/0:24,0:24:56.97:0,57,912	0/0:21,0:19:53.04:0,53,655	0/0:17,0:17:48.59:0,49,750	0/0:125,0:125:99:0,319,4711	0/0:27,0:27:75.15:0,75,1164	0/0:26,0:26:71.95:0,72,996	0/0:53,0:53:99:0,141,2152	0/0:17,0:17:51.10:0,51,750	0/0:29,0:28:77.11:0,77,1185	0/0:18,0:17:54.14:0,54,808	0/0:12,0:11:33.09:0,33,506
chr10	2225339	.	T	TCA	593.96	PASS	AB=0.974;AC=7;AF=0.130;AN=54;BaseQRankSum=8.093;DP=821;FS=0.633;HRun=0;HaplotypeScore=122.3530;InbreedingCoeff=0.7615;MQ=54.11;MQ0=23;MQRankSum=-1.127;QD=4.87;ReadPosRankSum=-1.446;VQSLOD=2.9043;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:35,5:39:24.37:472,24,0	0/0:10,0:10:18.03:0,18,200	./.	0/1:37,0:8:6.12:6,0,50	0/0:25,0:24:66.20:0,66,780	0/0:20,0:20:45.14:0,45,531	0/0:29,0:30:37.22:0,37,624	0/0:27,0:21:19.54:0,20,309	1/1:20,0:26:31.24:239,31,0	0/0:22,0:22:41.90:0,42,467	0/0:19,0:19:36:0,36,425	0/0:34,0:33:82.98:0,83,910	0/0:30,0:29:75.20:0,75,869	0/0:28,0:28:65.74:0,66,718	0/0:30,0:31:81.05:0,81,923	0/0:16,0:16:32.54:0,33,336	1/1:17,0:17:0.15:2,0,0	0/0:32,0:32:27.03:0,27,675	0/0:24,0:21:27.93:0,28,405	0/0:24,0:23:57.16:0,57,668	0/0:117,2:117:91.68:0,92,2156	0/0:24,0:25:50.95:0,51,557	0/0:27,0:28:51.05:0,51,541	0/0:56,0:57:99:0,105,1207	0/0:10,0:10:18.05:0,18,205	0/0:25,0:24:46.36:0,46,547	0/0:13,0:13:24.06:0,24,274	0/0:10,0:9:13.26:0,13,130
chr10	2225629	.	A	AT	2918.43	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-12.689;DP=713;FS=1.339;HRun=8;HaplotypeScore=65.0745;InbreedingCoeff=0.9968;MQ=78.16;MQ0=0;MQRankSum=-1.949;QD=29.18;ReadPosRankSum=2.225;VQSLOD=3.7956;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,30:31:87.26:1004,87,0	0/0:9,0:9:24.01:0,24,220	0/0:19,0:19:19.60:0,20,350	0/0:14,0:14:30.01:0,30,272	0/0:32,0:32:87.04:0,87,796	0/0:16,0:16:48.03:0,48,439	0/0:25,0:25:75.01:0,75,677	0/0:35,0:35:87.02:0,87,793	1/1:3,32:35:84.25:970,84,0	0/0:36,0:36:93.03:0,93,850	0/0:18,0:18:54.01:0,54,489	0/0:23,0:23:60.02:0,60,549	0/0:25,0:25:60.02:0,60,549	0/0:17,0:17:51.03:0,51,467	0/0:28,0:29:71.06:0,71,637	0/0:18,0:18:39:0,39,357	1/1:2,31:34:96.12:1088,96,0	0/0:25,0:25:62.99:0,63,569	0/0:29,0:30:65.04:0,65,580	0/0:21,0:21:57.03:0,57,522	0/0:23,0:23:66:0,66,593	0/0:29,0:29:46.45:0,46,679	0/0:25,0:25:69.03:0,69,631	0/0:26,0:26:78.04:0,78,713	0/0:32,0:32:90.05:0,90,824	0/0:33,0:33:93.03:0,93,846	0/0:43,0:43:99:0,114,1042	0/0:10,0:10:30.02:0,30,275
chr10	2226257	.	CT	C	1462.22	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.052;DP=706;FS=5.887;HRun=2;HaplotypeScore=69.5832;InbreedingCoeff=0.9993;MQ=88.60;MQ0=0;MQRankSum=-4.972;QD=34.81;ReadPosRankSum=1.057;VQSLOD=4.0093;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,42:42:99:1557,120,0	0/0:12,0:12:36.12:0,36,539	0/0:26,0:27:74.73:0,75,1007	0/0:28,0:28:78.01:0,78,1060	0/0:22,0:22:66.20:0,66,951	0/0:22,0:22:66.16:0,66,961	0/0:37,0:37:99:0,111,1567	0/0:30,0:30:84.23:0,84,1197	0/0:27,0:27:78.26:0,78,1166	0/0:28,0:28:75.25:0,75,1105	0/0:14,0:14:42.02:0,42,576	0/0:27,0:27:81.24:0,81,1189	0/0:26,0:26:72.24:0,72,1076	0/0:25,0:25:72.24:0,72,1079	0/0:34,0:34:99:0,102,1525	0/0:22,0:22:66.22:0,66,987	0/0:28,0:28:84.19:0,84,1209	0/0:29,0:29:84.27:0,84,1236	0/0:24,0:24:72.22:0,72,1042	0/0:21,0:21:63.20:0,63,926	0/0:30,0:30:87.28:0,87,1283	0/0:30,0:30:90.29:0,90,1308	0/0:17,0:17:48.04:0,48,648	0/0:30,0:30:90.14:0,90,1278	0/0:15,0:15:42.10:0,42,585	0/0:24,0:24:72.24:0,72,1078	0/0:25,0:25:72.22:0,72,1052	0/0:10,0:10:30.08:0,30,428
chr10	2227838	.	TAA	T	1154.87	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=3.747;DP=367;FS=0.000;HRun=13;HaplotypeScore=47.4687;InbreedingCoeff=0.9483;MQ=55.99;MQ0=2;MQRankSum=3.626;QD=19.91;ReadPosRankSum=4.776;VQSLOD=2.4800;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,20:23:44.07:484,44,0	0/0:8,0:8:15.01:0,15,177	0/0:13,0:8:18.06:0,18,251	0/0:10,0:6:11.68:0,12,113	0/0:15,0:16:41.54:0,42,511	0/0:13,0:14:29.57:0,30,366	0/0:9,0:10:17.46:0,17,178	0/0:11,0:19:39.77:0,40,337	1/1:4,11:15:36.04:349,36,0	0/0:15,0:18:38.49:0,38,381	0/0:7,0:7:17.97:0,18,234	0/0:9,0:9:18:0,18,218	0/0:12,0:12:26.67:0,27,344	0/0:14,0:14:26.97:0,27,322	0/0:9,0:9:20.51:0,21,231	0/0:9,0:9:23.98:0,24,283	1/1:3,17:20:48.04:464,48,0	0/0:16,0:18:39.79:0,40,424	0/0:15,0:15:33.11:0,33,474	0/0:8,0:9:12.04:0,12,159	0/0:11,0:12:26.57:0,27,340	0/0:11,0:12:26.97:0,27,308	0/0:9,0:10:23.45:0,23,243	0/0:17,0:16:24.06:0,24,311	0/0:10,0:13:33.04:0,33,404	0/0:8,0:15:23.99:0,24,253	0/0:3,0:9:23.97:0,24,211	0/0:3,0:7:14.99:0,15,132
chr10	2228707	.	TTC	T	319.68	PASS	AB=0.942;AC=20;AF=0.385;AN=52;BaseQRankSum=6.636;DP=557;FS=15.048;HRun=0;HaplotypeScore=97.4949;InbreedingCoeff=-0.0720;MQ=71.46;MQ0=6;MQRankSum=-3.682;QD=1.07;ReadPosRankSum=4.085;VQSLOD=0.7061;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:21:12.21:56,12,0	0/0:7,0:7:3.01:0,3,44	./.	0/0:42,0:22:0.47:0,0,1	0/1:13,3:16:52.61:53,0,57	0/0:17,0:17:8.99:0,9,91	0/1:21,0:22:3.07:3,0,107	0/0:31,0:31:2.97:0,3,20	1/1:21,0:20:29.16:139,29,0	0/1:18,1:19:15.07:15,0,183	0/0:26,0:25:15:0,15,158	0/0:10,0:10:3.01:0,3,44	0/0:11,0:11:3.01:0,3,44	0/1:15,1:16:23.30:23,0,39	0/1:15,0:15:9.13:9,0,159	./.	1/1:8,0:11:3:26,3,0	0/1:10,1:13:34.43:34,0,77	0/0:17,0:17:2.22:0,2,7	1/1:14,1:15:3.01:32,3,0	0/0:29,0:29:8.96:0,9,68	0/1:17,1:18:23.30:23,0,80	0/1:26,0:26:21.28:21,0,56	0/1:12,1:13:20.29:20,0,121	0/1:24,0:25:2.18:2,0,58	0/1:24,0:24:2.53:3,0,242	0/1:22,1:24:2.37:2,0,245	0/0:21,0:28:22.24:0,22,212
chr10	2228719	.	CTCTCTCTCTCTCTCTCTCTCTCT	C	3093.23	PASS	AB=0.841;AC=4;AF=0.071;AN=56;BaseQRankSum=8.051;DP=658;FS=1.552;HRun=0;HaplotypeScore=344.5472;InbreedingCoeff=0.4545;MQ=61.66;MQ0=12;MQRankSum=-5.561;QD=46.87;ReadPosRankSum=5.624;VQSLOD=1.6309;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:8,7:15:29.08:1159,0,29	0/0:12,0:12:33.08:0,33,2564	0/1:33,0:15:15.23:15,0,527	0/0:41,0:15:10.88:0,11,565	0/0:23,0:23:66.22:0,66,3830	0/0:25,0:24:69.22:0,69,4175	0/0:26,0:26:69.20:0,69,4132	0/0:28,0:28:81.27:0,81,3682	1/1:7,11:17:29.06:2033,29,0	0/0:21,0:21:63.21:0,63,4196	0/0:26,0:24:60.20:0,60,3361	0/0:12,0:12:33.11:0,33,2076	0/0:13,0:13:34.05:0,34,1985	0/0:21,0:21:54.16:0,54,2949	0/0:25,0:25:63.21:0,63,4505	0/0:12,0:12:30.56:0,31,1876	0/0:19,0:19:42.14:0,42,2079	0/0:17,0:16:42.14:0,42,2824	0/0:20,0:20:60.20:0,60,2920	0/0:24,0:24:68.26:0,68,3828	0/0:28,0:28:63.21:0,63,3435	0/0:25,0:25:66.69:0,67,4412	0/0:38,0:38:99:0,99,6357	0/0:17,0:17:43.54:0,44,3389	0/0:32,0:32:90.75:0,91,5383	0/0:30,0:29:87.30:0,87,6355	0/0:25,0:25:69.24:0,69,4811	0/0:32,0:31:78.27:0,78,4961
chr10	2230850	.	CGT	C	526.01	PASS	AB=0.917;AC=12;AF=0.231;AN=52;BaseQRankSum=3.344;DP=636;FS=6.556;HRun=0;HaplotypeScore=97.9305;InbreedingCoeff=-0.1328;MQ=53.77;MQ0=15;MQRankSum=2.165;QD=1.90;ReadPosRankSum=0.803;VQSLOD=1.4897;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:13.99:0,14,81	0/0:13,0:13:1.56:0,2,139	./.	./.	0/0:20,0:20:27.02:0,27,374	0/1:24,1:25:9.29:9,0,292	0/0:35,2:38:11.74:0,12,544	0/0:28,0:27:11.63:0,12,93	0/0:18,0:18:8.74:0,9,64	0/0:29,0:29:29.31:0,29,405	0/1:15,0:15:18.72:19,0,124	0/1:27,0:27:53.48:53,0,203	0/1:15,2:17:47.80:48,0,240	0/1:20,2:22:74.51:75,0,200	0/1:13,3:16:48.68:49,0,143	0/1:15,2:17:37.87:38,0,292	0/0:22,0:20:7.80:0,8,41	0/1:11,1:13:14.82:15,0,168	0/0:15,0:13:3.01:0,3,45	0/0:17,0:17:15.03:0,15,201	0/1:54,2:54:19.92:20,0,551	0/0:14,0:13:15.02:0,15,198	0/0:8,0:8:6.02:0,6,91	1/1:27,0:40:17.04:84,17,0	0/0:19,0:20:0.97:0,1,283	0/1:20,9:29:5.62:262,0,6	0/0:12,0:21:25.51:0,26,188	0/0:12,0:12:13.43:0,13,136
chr10	2230854	.	T	TGTGTGTGTGTGC	541.02	PASS	AB=1.000;AC=8;AF=0.143;AN=56;BaseQRankSum=3.707;DP=632;FS=2.649;HRun=0;HaplotypeScore=207.2364;InbreedingCoeff=0.4113;MQ=52.51;MQ0=16;MQRankSum=-2.127;QD=3.58;ReadPosRankSum=-2.111;VQSLOD=2.6806;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:37,0:37:74.72:75,0,75	0/0:12,0:12:10.88:0,11,276	0/1:19,0:5:0.82:1,0,38	0/0:26,0:10:14.95:0,15,137	0/0:19,0:19:40.45:0,40,789	0/0:25,0:25:54.48:0,54,860	0/0:37,0:37:77.92:0,78,1297	0/0:26,0:25:51.55:0,52,370	1/1:6,11:21:6.02:359,6,0	0/0:30,0:30:50.95:0,51,1029	0/0:14,0:14:27.02:0,27,532	0/0:26,0:26:48.96:0,49,698	0/0:18,0:18:30.28:0,30,713	0/0:23,0:23:55.77:0,56,841	0/0:15,0:15:32.61:0,33,590	0/0:17,0:17:37.49:0,37,785	1/1:22,0:20:8.67:154,9,0	0/0:14,0:14:35.40:0,35,525	0/0:16,0:14:34.14:0,34,292	0/0:15,0:15:20.76:0,21,304	0/0:52,0:50:99:0,102,1292	0/0:16,0:15:28.57:0,29,481	0/0:8,0:8:12.01:0,12,265	0/0:38,0:38:30.37:0,30,428	0/0:21,0:21:48.31:0,48,795	0/1:30,0:30:74.69:75,0,631	0/1:22,0:20:0.50:0,0,124	0/0:13,0:12:24.95:0,25,214
chr10	2230858	.	T	TGTGTGTGC	331.77	PASS	AB=0.975;AC=4;AF=0.071;AN=56;BaseQRankSum=5.507;DP=637;FS=0.000;HRun=0;HaplotypeScore=162.9678;InbreedingCoeff=0.2822;MQ=52.51;MQ0=16;MQRankSum=-1.883;QD=5.35;ReadPosRankSum=-0.093;VQSLOD=2.5781;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:11,23:42:3.01:0,3,53	0/0:11,0:11:26.68:0,27,342	0/0:21,0:5:5.19:0,5,106	0/0:28,0:8:20.99:0,21,198	0/0:19,0:19:50.97:0,51,769	0/0:24,0:24:54.04:0,54,824	0/0:36,0:36:84.06:0,84,1276	0/0:27,0:26:60.18:0,60,443	0/1:18,1:19:15.93:199,0,16	0/0:31,0:31:78.04:0,78,1073	0/0:14,0:14:27.02:0,27,433	0/0:24,0:24:51.59:0,52,703	0/0:18,0:18:39.21:0,39,688	0/0:24,0:24:62.08:0,62,845	0/0:17,0:17:41.58:0,42,590	0/0:16,0:16:37.58:0,38,708	1/1:22,0:20:4.43:145,4,0	0/0:14,0:14:36.24:0,36,494	0/0:18,0:16:36.91:0,37,322	0/0:15,0:15:26.61:0,27,330	0/0:54,0:53:99:0,112,1424	0/0:13,0:12:33.03:0,33,485	0/0:8,0:8:12.01:0,12,212	0/0:35,0:35:50.92:0,51,559	0/0:22,0:22:55.27:0,55,767	0/0:31,0:31:67.82:0,68,819	0/1:21,0:19:64.94:92,0,65	0/0:13,0:12:10.89:0,11,165
chr10	2230934	.	CA	C	259.13	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.877;DP=594;FS=6.380;HRun=6;HaplotypeScore=73.6336;InbreedingCoeff=0.9992;MQ=92.14;MQ0=0;MQRankSum=-5.496;QD=18.51;ReadPosRankSum=0.380;VQSLOD=3.1718;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:66.08:0,66,796	0/0:15,0:15:45.11:0,45,560	0/0:27,0:27:69.21:0,69,871	0/0:23,0:23:60.05:0,60,694	0/0:19,0:19:54.17:0,54,697	0/0:19,0:19:54.17:0,54,698	0/0:23,0:23:66.19:0,66,850	0/0:31,0:31:75.23:0,75,960	0/0:21,0:21:54.17:0,54,701	0/0:29,0:29:78.24:0,78,1002	0/0:20,0:20:48.08:0,48,556	0/0:24,0:24:63.20:0,63,828	0/0:18,0:18:48.16:0,48,630	0/0:24,0:24:69.22:0,69,908	0/0:23,0:23:69.22:0,69,903	0/0:17,0:17:51.15:0,51,656	1/1:0,14:14:32.67:354,33,0	0/0:14,0:14:39.08:0,39,494	0/0:22,0:22:63.19:0,63,804	0/0:18,0:18:51.15:0,51,645	0/0:29,0:29:75.24:0,75,987	0/0:12,0:12:36.06:0,36,428	0/0:14,0:14:42.12:0,42,525	0/0:32,0:32:72.06:0,72,947	0/0:14,0:14:39.12:0,39,500	0/0:13,0:13:36.11:0,36,462	0/0:28,0:28:72.05:0,72,947	0/0:15,0:15:45.15:0,45,592
chr10	2230950	.	C	CT	305.77	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.066;DP=626;FS=7.300;HRun=0;HaplotypeScore=73.9187;InbreedingCoeff=0.9987;MQ=89.70;MQ0=0;MQRankSum=-4.463;QD=20.38;ReadPosRankSum=1.154;VQSLOD=5.2506;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:40:90.30:0,90,1256	0/0:15,0:15:45.14:0,45,612	0/0:28,0:28:75.08:0,75,1020	0/0:22,0:22:60.10:0,60,772	0/0:20,0:20:60.15:0,60,788	0/0:20,0:20:57.16:0,57,760	0/0:21,0:21:63.18:0,63,834	0/0:33,0:33:93.27:0,93,1236	0/0:25,0:25:66.20:0,66,902	0/0:27,0:27:78.24:0,78,1059	0/0:22,0:22:63.20:0,63,853	0/0:21,0:21:60.20:0,60,839	0/0:20,0:20:54.17:0,54,729	0/0:26,0:26:78.26:0,78,1087	0/0:25,0:25:75.24:0,75,1027	0/0:16,0:16:45.15:0,45,628	1/1:1,14:15:27.02:400,27,0	0/0:14,0:14:39.11:0,39,527	0/0:24,0:24:68.78:0,69,872	0/0:20,0:20:54.18:0,54,751	0/0:29,0:29:81.27:0,81,1130	0/0:12,0:12:36.10:0,36,484	0/0:19,0:19:57.15:0,57,745	0/0:31,0:31:84.28:0,84,1173	0/0:18,0:18:51.12:0,51,676	0/0:19,0:19:51.15:0,51,678	0/0:28,0:28:81.26:0,81,1108	0/0:15,0:15:45.12:0,45,580
chr10	2232557	.	TA	T	2017.60	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.012;DP=642;FS=0.000;HRun=1;HaplotypeScore=63.2884;InbreedingCoeff=0.9986;MQ=91.74;MQ0=0;MQRankSum=-3.443;QD=33.63;ReadPosRankSum=3.650;VQSLOD=3.3576;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,37:37:90.30:1258,90,0	0/0:11,0:11:30.10:0,30,479	0/0:23,0:23:63.21:0,63,1007	0/0:29,0:31:68.24:0,68,935	0/0:32,0:32:93.30:0,93,1450	0/0:20,0:20:60.19:0,60,933	0/0:26,0:26:78.25:0,78,1223	0/0:26,0:26:78.25:0,78,1205	1/1:0,23:23:63.21:881,63,0	0/0:23,0:23:69.21:0,69,1059	0/0:25,0:25:66.22:0,66,1040	0/0:15,0:15:45.15:0,45,709	0/0:8,0:8:24.08:0,24,382	0/0:20,0:20:60.20:0,60,952	0/0:21,0:21:63.19:0,63,955	0/0:16,0:16:48.15:0,48,739	0/0:19,0:19:57.19:0,57,893	0/0:21,0:21:57.19:0,57,911	0/0:24,0:24:72.21:0,72,1104	0/0:23,0:23:66.21:0,66,1032	0/0:32,0:32:96.28:0,96,1453	0/0:23,0:23:63.03:0,63,939	0/0:15,0:15:39.13:0,39,615	0/0:33,0:33:99:0,99,1504	0/0:21,0:21:60.18:0,60,934	0/0:30,0:30:87.28:0,87,1348	0/0:26,0:26:75.24:0,75,1174	0/0:18,0:18:54.18:0,54,863
chr10	2233152	.	CGT	C	329.12	PASS	AB=0.988;AC=9;AF=0.161;AN=56;BaseQRankSum=5.389;DP=643;FS=8.066;HRun=0;HaplotypeScore=88.9432;InbreedingCoeff=0.2699;MQ=65.52;MQ0=2;MQRankSum=-1.329;QD=2.59;ReadPosRankSum=-1.228;VQSLOD=1.0368;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:37,0:37:25.48:25,0,29	0/0:11,0:11:24.02:0,24,331	0/0:36,0:20:40.93:0,41,487	0/0:31,0:23:34.89:0,35,415	0/0:17,0:17:45.14:0,45,693	0/0:16,0:16:32.61:0,33,504	0/0:36,0:36:96.33:0,96,1545	0/1:12,0:12:14.96:18,0,15	0/1:23,0:23:63.30:63,0,280	0/0:28,0:28:63.17:0,63,954	0/0:13,0:13:30.09:0,30,462	0/0:19,0:19:45.06:0,45,670	0/0:20,0:20:54.18:0,54,866	0/0:29,2:31:60.06:0,60,947	0/0:26,2:28:1.38:0,1,999	0/0:12,0:12:24.07:0,24,357	0/0:27,0:27:63.14:0,63,684	0/0:34,0:34:96.30:0,96,1518	0/1:15,1:16:34.49:34,0,329	0/0:13,0:13:36.12:0,36,585	0/0:65,1:66:99:0,133,2362	0/0:19,0:19:44.66:0,45,725	0/0:12,0:12:27.09:0,27,439	0/0:22,0:22:60.19:0,60,950	0/0:24,0:23:63.15:0,63,923	0/1:20,0:19:31.61:136,0,32	1/1:14,0:14:12.47:121,12,0	1/1:5,0:5:6.49:74,6,0
chr10	2233163	.	GT	G	223.83	PASS	AB=0.754;AC=6;AF=0.107;AN=56;BaseQRankSum=6.574;DP=622;FS=4.805;HRun=1;HaplotypeScore=77.4432;InbreedingCoeff=0.7005;MQ=61.72;MQ0=5;MQRankSum=-1.981;QD=7.22;ReadPosRankSum=-1.019;VQSLOD=0.3768;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:33:80.97:0,81,987	0/0:11,0:11:33.11:0,33,500	0/0:33,0:18:50.46:0,50,680	0/0:28,0:18:45.14:0,45,659	0/0:17,0:17:51.17:0,51,793	0/0:18,0:18:45.11:0,45,650	0/0:36,0:36:99:0,108,1688	0/1:5,1:6:0.64:56,0,1	0/0:22,0:22:65.45:0,65,843	0/0:26,0:26:72.23:0,72,1120	0/0:14,0:14:42.11:0,42,603	0/0:20,0:20:57.17:0,57,855	0/0:21,0:21:60.18:0,60,922	0/0:31,0:31:87.26:0,87,1298	0/0:26,0:26:74.02:0,74,1145	0/0:12,0:12:36.10:0,36,523	0/0:29,0:27:69.23:0,69,1084	0/0:35,0:35:99:0,105,1631	0/0:15,0:15:42.39:0,42,594	0/0:13,0:13:39.12:0,39,600	0/0:74,0:74:99:0,221,3284	0/0:19,0:19:50.68:0,51,804	0/0:11,0:11:33.11:0,33,507	0/0:22,0:22:66.22:0,66,1045	0/0:23,0:22:69.23:0,69,1083	0/1:6,7:12:28.32:89,0,28	1/1:5,3:8:14.91:123,15,0	1/1:0,4:4:9:85,9,0
chr10	2233165	.	GT	G	279.24	PASS	AB=0.750;AC=7;AF=0.125;AN=56;BaseQRankSum=6.976;DP=620;FS=5.917;HRun=1;HaplotypeScore=76.3210;InbreedingCoeff=0.7602;MQ=60.98;MQ0=5;MQRankSum=-1.713;QD=9.31;ReadPosRankSum=-2.222;VQSLOD=0.2971;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:32:63.57:0,64,374	0/0:12,0:12:36.12:0,36,544	0/0:33,0:18:43.42:0,43,648	0/0:27,0:17:42.13:0,42,605	0/0:17,0:17:51.17:0,51,794	0/0:17,0:17:45.15:0,45,677	0/0:36,0:36:99:0,108,1673	1/1:7,0:7:4.59:101,5,0	0/0:22,0:22:64.95:0,65,790	0/0:27,0:27:75.22:0,75,1133	0/0:13,0:13:39.11:0,39,570	0/0:20,0:20:57.19:0,57,869	0/0:20,0:20:60.20:0,60,938	0/0:30,0:30:84.23:0,84,1241	0/0:26,0:26:74.02:0,74,1144	0/0:12,0:12:36.11:0,36,523	0/0:29,0:27:64.09:0,64,1003	0/0:34,0:34:99:0,102,1600	0/0:15,0:15:42.39:0,42,594	0/0:13,0:13:39.13:0,39,613	0/0:75,0:75:99:0,220,3257	0/0:19,0:19:50.66:0,51,788	0/0:12,0:12:36.11:0,36,532	0/0:23,0:23:69.19:0,69,1063	0/0:24,0:23:72.23:0,72,1108	0/1:8,4:11:27.15:103,0,27	1/1:5,2:7:15.39:124,15,0	1/1:2,2:4:9:85,9,0
chr10	2233166	.	T	TG	564	PASS	AB=1.000;AC=8;AF=0.143;AN=56;BaseQRankSum=7.070;DP=616;FS=9.278;HRun=1;HaplotypeScore=79.3995;InbreedingCoeff=0.6588;MQ=60.17;MQ0=5;MQRankSum=0.153;QD=9.10;ReadPosRankSum=0.398;VQSLOD=0.3370;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,24:32:30.04:613,30,0	0/0:12,0:12:36.07:0,36,439	0/0:34,0:18:35.02:0,35,489	0/0:26,0:16:23.95:0,24,334	0/0:17,0:17:48.16:0,48,621	0/0:17,0:17:42.10:0,42,524	0/0:35,0:35:99:0,105,1355	0/1:7,0:7:1.78:43,0,2	0/0:23,0:23:45.81:0,46,253	0/0:28,0:28:75.22:0,75,934	0/0:12,0:12:36.10:0,36,449	0/0:20,0:20:54.17:0,54,691	0/0:20,0:20:60.19:0,60,777	0/0:28,0:28:69.22:0,69,893	0/0:26,0:26:77.59:0,78,933	0/0:12,0:12:33.11:0,33,425	0/0:29,0:27:51.09:0,51,304	0/0:34,0:34:99:0,102,1314	0/0:15,0:15:44.71:0,45,526	0/0:14,0:14:39.13:0,39,505	0/0:74,0:74:99:0,172,2566	0/0:19,0:19:51.14:0,51,644	0/0:12,0:12:36.10:0,36,451	0/0:23,0:23:69.18:0,69,873	0/0:24,0:23:72.21:0,72,903	0/1:11,0:10:16.51:17,0,31	1/1:7,0:7:1.48:5,1,0	1/1:4,0:4:4.44:14,4,0
chr10	2233168	.	T	TG	1354.29	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=3.735;DP=612;FS=5.450;HRun=6;HaplotypeScore=77.9923;InbreedingCoeff=0.7645;MQ=60.76;MQ0=5;MQRankSum=-2.064;QD=13.82;ReadPosRankSum=0.138;VQSLOD=2.9116;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:33,0:32:55.37:644,55,0	0/0:11,0:11:30.06:0,30,304	0/0:33,0:18:29.89:0,30,264	0/0:22,0:13:14.72:0,15,139	0/0:18,0:18:39.08:0,39,398	0/0:15,0:15:39.04:0,39,386	0/0:36,0:36:99:0,105,1051	1/1:8,0:8:0.95:48,1,0	0/0:23,0:23:42.13:0,42,232	0/0:28,0:28:69.13:0,69,692	0/0:11,0:11:33.02:0,33,319	0/0:20,0:20:51.07:0,51,509	0/0:20,0:20:57.11:0,57,574	0/0:25,0:25:66.13:0,66,662	0/0:28,0:28:80.80:0,81,765	0/0:11,0:11:27:0,27,262	1/1:3,26:27:60.19:750,60,0	0/0:34,0:34:96.21:0,96,976	0/0:15,0:15:35.84:0,36,336	0/0:14,0:14:42.05:0,42,416	0/0:72,0:72:99:0,180,1795	0/0:19,0:19:48.10:0,48,488	0/0:12,0:12:36.08:0,36,366	0/0:23,0:23:63.14:0,63,642	0/0:24,0:23:60.13:0,60,611	0/1:15,0:14:16.86:32,0,17	1/1:7,0:7:4.60:15,5,0	1/1:6,0:6:5.19:20,5,0
chr10	2233696	.	G	GGT	1340.42	PASS	AB=0.969;AC=6;AF=0.107;AN=56;BaseQRankSum=2.269;DP=687;FS=8.494;HRun=0;HaplotypeScore=107.7822;InbreedingCoeff=0.6462;MQ=67.87;MQ0=17;MQRankSum=-0.638;QD=11.17;ReadPosRankSum=0.415;VQSLOD=2.4031;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:36,7:46:47.41:767,47,0	0/0:10,0:10:27.06:0,27,318	0/0:39,0:21:23.88:0,24,215	0/1:29,0:22:7.83:8,0,367	0/0:29,0:29:75.22:0,75,906	0/0:16,0:16:38.85:0,39,445	0/0:20,0:20:47.61:0,48,536	0/0:28,0:25:59.65:0,60,672	1/1:17,5:27:47.82:685,48,0	0/0:33,0:32:87.23:0,87,1029	0/0:19,0:19:48.15:0,48,587	0/0:16,0:15:19.91:0,20,192	0/0:19,0:18:16.56:0,17,252	0/0:19,0:19:30.73:0,31,288	0/0:21,0:21:54.17:0,54,664	0/1:14,1:15:13.09:13,0,300	0/0:37,0:36:34.74:0,35,492	0/0:12,0:12:27.08:0,27,332	0/0:17,0:15:30.09:0,30,371	0/0:30,0:30:69.18:0,69,825	0/0:37,0:36:75.20:0,75,892	0/0:20,0:20:47.71:0,48,540	0/0:32,0:32:72.21:0,72,864	0/0:35,0:35:81.72:0,82,997	0/0:15,0:15:39.09:0,39,461	0/0:24,0:23:37.95:0,38,524	0/0:22,0:20:30.09:0,30,365	0/0:17,0:16:42.13:0,42,512
chr10	2233711	.	ATGTG	A	1123.66	PASS	AB=0.935;AC=11;AF=0.196;AN=56;BaseQRankSum=4.569;DP=728;FS=0.000;HRun=0;HaplotypeScore=130.6653;InbreedingCoeff=0.6007;MQ=58.29;MQ0=26;MQRankSum=0.933;QD=6.50;ReadPosRankSum=-1.936;VQSLOD=2.3519;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:49:13.98:0,14,200	0/0:8,0:9:17.80:0,18,350	0/0:42,0:12:5.97:0,6,58	0/0:43,0:21:7.73:0,8,56	0/0:27,0:29:53.11:0,53,1024	0/0:16,0:16:23.07:0,23,447	0/1:20,0:21:12.34:12,0,495	1/1:23,11:31:32.98:394,33,0	0/0:23,0:25:22.09:0,22,315	0/0:36,0:36:44.03:0,44,1251	0/0:20,0:20:33.58:0,34,731	0/0:11,0:20:15.05:0,15,282	0/0:12,0:19:9.50:0,10,166	0/0:12,0:19:11.91:0,12,216	0/0:22,0:22:50.96:0,51,1002	0/0:14,0:15:27.02:0,27,495	0/0:15,0:37:29.10:0,29,682	0/0:11,0:11:27.09:0,27,569	0/0:19,0:17:17.16:0,17,154	0/1:24,2:27:51.93:52,0,727	0/0:36,0:41:68.67:0,69,1254	0/0:22,0:21:32.75:0,33,562	0/0:35,0:35:16.10:0,16,1148	0/1:37,1:39:19.60:20,0,1275	0/0:17,0:18:38.31:0,38,742	1/1:10,7:16:18.06:291,18,0	1/1:8,12:19:13.47:199,13,0	1/1:8,7:14:21.07:324,21,0
chr10	2233948	.	A	AT	1382.51	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.901;DP=626;FS=12.738;HRun=4;HaplotypeScore=71.9219;InbreedingCoeff=0.9988;MQ=91.02;MQ0=1;MQRankSum=-4.499;QD=32.92;ReadPosRankSum=1.785;VQSLOD=3.4091;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,42:42:99:1477,108,0	0/0:12,0:12:33.09:0,33,374	0/0:24,0:23:60.62:0,61,666	0/0:28,0:28:72.17:0,72,798	0/0:22,0:22:66.19:0,66,748	0/0:22,0:22:57.16:0,57,646	0/0:19,0:19:48.13:0,48,545	0/0:26,0:26:66.18:0,66,741	0/0:19,0:19:57.12:0,57,617	0/0:26,0:26:69.19:0,69,777	0/0:11,0:11:30.02:0,30,316	0/0:16,0:16:39.09:0,39,433	0/0:13,0:13:39.07:0,39,428	0/0:27,0:27:78.19:0,78,865	0/0:25,0:25:72.21:0,72,817	0/0:15,0:15:45.13:0,45,511	0/0:34,0:34:96.26:0,96,1079	0/0:25,0:25:72.20:0,72,814	0/0:15,0:15:42.12:0,42,476	0/0:26,0:26:72.17:0,72,797	0/0:24,0:23:57.16:0,57,646	0/0:25,0:25:75.21:0,75,850	0/0:28,0:28:84.22:0,84,943	0/0:24,0:24:69.20:0,69,782	0/0:16,0:16:47.97:0,48,524	0/0:22,0:22:57.14:0,57,624	0/0:27,0:27:75.18:0,75,832	0/0:13,0:13:33.09:0,33,374
chr10	2234560	.	A	ACC	1118.56	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=2.915;DP=663;FS=5.232;HRun=1;HaplotypeScore=133.4953;InbreedingCoeff=0.7481;MQ=50.98;MQ0=32;MQRankSum=1.322;QD=16.21;ReadPosRankSum=-0.465;VQSLOD=0.7548;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:28,3:31:17.05:323,17,0	0/1:5,0:5:3.90:4,0,100	0/0:26,0:11:29.23:0,29,339	0/0:54,0:14:3.82:0,4,173	0/0:26,0:25:54.04:0,54,665	0/0:20,0:19:42.06:0,42,568	0/0:19,0:19:53.82:0,54,631	0/0:29,0:26:64.01:0,64,786	1/1:22,9:31:37.66:913,38,0	0/0:35,0:34:96.90:0,97,1020	0/0:18,0:18:39.06:0,39,483	0/0:27,0:26:68.60:0,69,795	0/0:24,0:22:59.63:0,60,643	0/0:17,0:17:38.69:0,39,417	0/0:21,0:20:33.65:0,34,644	0/0:25,0:24:57.14:0,57,802	0/0:20,0:19:8.28:0,8,155	0/0:16,0:18:50.93:0,51,594	0/0:17,0:14:38.99:0,39,447	0/0:15,0:15:41.56:0,42,531	0/0:21,0:19:48.13:0,48,682	0/0:27,0:26:51.05:0,51,656	0/0:14,0:13:23.42:0,23,299	0/0:36,0:33:71.90:0,72,860	0/0:12,0:12:18.03:0,18,232	0/0:34,0:29:62.33:0,62,692	0/0:20,0:19:40.38:0,40,459	0/0:18,0:15:36.06:0,36,487
chr10	2234562	.	AAG	A	600.71	PASS	AB=0.958;AC=19;AF=0.352;AN=54;BaseQRankSum=0.690;DP=656;FS=12.824;HRun=0;HaplotypeScore=121.5299;InbreedingCoeff=-0.1969;MQ=51.09;MQ0=31;MQRankSum=2.860;QD=1.68;ReadPosRankSum=2.458;VQSLOD=1.7512;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:30:0.82:2,1,0	1/1:5,0:5:2.96:19,3,0	./.	0/0:48,0:14:0:0,0,0	0/1:25,0:25:36.77:37,0,255	0/1:16,3:18:26.31:26,0,37	0/1:17,0:19:57.66:58,0,143	0/0:28,0:25:2.49:0,2,6	0/0:20,0:33:13.73:0,14,118	0/1:35,0:35:96.40:96,0,253	0/1:18,0:18:15.84:16,0,121	0/1:26,0:25:99:117,0,173	0/1:23,0:21:28.21:28,0,224	0/1:17,0:17:47.19:47,0,116	0/1:21,0:20:69.69:70,0,138	0/0:23,0:26:18.03:0,18,211	0/0:11,0:16:18.39:0,18,136	0/1:20,0:20:2.13:2,0,230	0/0:19,0:16:6.01:0,6,72	0/0:15,0:15:6.02:0,6,88	0/1:21,0:20:14.27:14,0,34	0/1:18,9:26:40.14:40,0,172	0/0:11,3:13:5.68:0,6,66	0/1:37,0:34:99:114,0,204	1/1:10,0:10:5.14:61,5,0	0/0:31,0:28:39.07:0,39,429	0/0:14,0:21:21.01:0,21,215	0/0:18,0:15:9.02:0,9,98
chr10	2234601	.	A	AG	180.90	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.094;DP=760;FS=8.187;HRun=1;HaplotypeScore=107.7787;InbreedingCoeff=0.9896;MQ=61.68;MQ0=42;MQRankSum=-4.431;QD=10.64;ReadPosRankSum=1.765;VQSLOD=1.3929;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:19:20.76:0,21,259	0/0:10,0:9:27.09:0,27,342	0/0:46,0:21:57.06:0,57,661	0/0:67,0:26:63.78:0,64,720	0/0:31,0:30:64.61:0,65,746	0/0:17,0:16:33.03:0,33,386	0/0:25,0:25:65.95:0,66,761	0/0:26,0:25:72.50:0,72,874	0/0:29,0:29:40.71:0,41,443	0/0:45,0:44:99:0,132,1560	0/0:25,0:25:60.09:0,60,713	0/0:23,0:22:59.91:0,60,659	0/0:25,0:24:62.96:0,63,769	0/0:17,0:17:35.95:0,36,408	0/0:23,0:22:59.23:0,59,665	0/0:26,0:25:59.85:0,60,724	1/1:4,13:12:20.66:273,21,0	0/0:18,0:17:44.33:0,44,527	0/0:27,0:25:75.17:0,75,930	0/0:24,0:24:63.63:0,64,785	0/0:15,0:14:36.01:0,36,435	0/0:32,0:31:69.15:0,69,841	0/0:20,0:20:39.12:0,39,497	0/0:43,0:39:76.98:0,77,886	0/0:20,0:20:45.01:0,45,518	0/0:30,0:28:76.15:0,76,868	0/0:37,0:36:57.59:0,58,868	0/0:22,0:20:54.10:0,54,655
chr10	2235426	.	ATT	A	1700.50	PASS	AB=0.693;AC=13;AF=0.232;AN=56;BaseQRankSum=6.438;DP=462;FS=0.000;HRun=14;HaplotypeScore=66.7553;InbreedingCoeff=0.7118;MQ=82.05;MQ0=1;MQRankSum=-0.435;QD=10.18;ReadPosRankSum=5.646;VQSLOD=1.7826;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,0:34:57.54:249,58,0	0/0:5,0:6:12.02:0,12,124	0/0:35,0:26:26.29:0,26,352	0/0:22,1:18:17.38:0,17,128	0/0:13,0:13:29.97:0,30,359	0/0:7,0:10:15.03:0,15,180	0/0:17,0:17:42.03:0,42,483	0/1:10,7:20:22.02:124,0,22	1/1:2,9:11:20.99:194,21,0	0/0:17,1:19:12.62:0,13,374	0/0:15,0:15:42.07:0,42,548	0/0:6,0:7:9.02:0,9,98	0/0:9,0:10:20.49:0,20,213	0/0:12,0:14:31.95:0,32,275	0/0:4,0:7:15:0,15,173	0/0:8,0:8:15.01:0,15,188	0/1:8,25:34:5.09:508,0,5	0/0:14,0:14:27.01:0,27,335	0/0:17,0:19:47.04:0,47,517	0/0:11,0:11:21.05:0,21,262	0/0:9,1:14:5.31:0,5,333	0/1:9,1:11:1.26:1,0,222	0/0:10,0:12:23.53:0,24,253	0/0:23,0:25:58.99:0,59,660	0/0:15,0:15:39.09:0,39,494	1/1:9,17:29:31.99:375,32,0	1/1:7,9:15:20.84:194,21,0	1/1:2,7:10:26.77:234,27,0
chr10	2235987	.	T	TG	4534.64	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=0.494;DP=534;FS=21.903;HRun=0;HaplotypeScore=173.1944;InbreedingCoeff=0.9876;MQ=70.03;MQ0=0;MQRankSum=-6.770;QD=37.48;ReadPosRankSum=2.860;VQSLOD=2.3876;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,21:27:69.13:944,69,0	0/0:4,0:4:9.02:0,9,109	0/0:24,0:24:65.36:0,65,902	0/0:14,0:14:39.06:0,39,490	0/0:22,0:22:44.83:0,45,588	0/0:27,0:27:78.25:0,78,1068	0/0:25,0:25:72.10:0,72,932	1/1:5,14:19:45.10:611,45,0	0/0:21,0:21:60.13:0,60,786	0/0:21,0:21:59.99:0,60,730	0/0:19,0:19:54.06:0,54,649	0/0:16,0:16:48.14:0,48,632	0/0:19,0:19:57.18:0,57,767	0/0:21,0:21:51.10:0,51,644	0/0:25,0:25:69.22:0,69,944	0/0:17,0:17:51.13:0,51,675	1/1:3,16:19:51.15:713,51,0	0/0:15,0:15:42.04:0,42,541	0/0:21,0:21:54.09:0,54,692	0/0:9,0:9:24.07:0,24,319	0/0:14,0:14:39.08:0,39,493	0/0:20,0:20:57.10:0,57,750	0/0:17,0:15:45.11:0,45,604	0/0:24,0:23:69.19:0,69,940	0/0:18,0:18:44.97:0,45,527	1/1:2,21:23:66.16:916,66,0	1/1:0,24:23:69.16:963,69,0	1/1:0,9:9:27.09:388,27,0
chr10	2236011	.	G	GT	21469.39	PASS	AB=0.765;AC=54;AF=0.964;AN=56;BaseQRankSum=0.541;DP=537;FS=0.000;HRun=0;HaplotypeScore=182.0586;InbreedingCoeff=-0.0364;MQ=69.02;MQ0=0;MQRankSum=-4.627;QD=39.98;ReadPosRankSum=2.247;VQSLOD=4.1694;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,21:22:54.14:839,54,0	1/1:0,5:5:12.04:190,12,0	0/1:12,6:19:55.10:346,0,55	0/1:9,3:12:9.43:189,0,9	1/1:3,21:24:54.18:830,54,0	1/1:0,25:25:69.23:1070,69,0	1/1:3,20:23:63.21:985,63,0	1/1:4,19:23:57.19:872,57,0	1/1:0,20:20:60.20:953,60,0	1/1:1,26:27:78.27:1233,78,0	1/1:1,15:16:35.69:569,36,0	1/1:1,11:12:36.12:571,36,0	1/1:2,18:20:57.14:846,57,0	1/1:1,18:19:48.13:713,48,0	1/1:2,27:29:81.13:1213,81,0	1/1:2,13:15:42.12:646,42,0	1/1:0,15:15:39.13:615,39,0	1/1:2,9:11:30.10:467,30,0	1/1:4,27:31:93.30:1410,93,0	1/1:0,11:11:29.89:429,30,0	1/1:0,11:11:30.10:439,30,0	1/1:1,20:21:57.15:869,57,0	1/1:1,15:14:36.12:572,36,0	1/1:3,24:26:72.22:1104,72,0	1/1:4,19:22:51.17:808,51,0	1/1:1,25:26:78.27:1229,78,0	1/1:1,23:23:69.21:1082,69,0	1/1:1,8:9:24.08:382,24,0
chr10	2236670	.	AACACACACACACACACACACAC	A	1592.65	PASS	AB=0.721;AC=5;AF=0.093;AN=54;BaseQRankSum=6.346;DP=492;FS=23.707;HRun=0;HaplotypeScore=243.6326;InbreedingCoeff=0.5480;MQ=75.67;MQ0=15;MQRankSum=-1.799;QD=26.11;ReadPosRankSum=0.503;VQSLOD=0.7771;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:32:24.06:0,24,1345	0/0:5,0:5:6.02:0,6,551	0/0:26,0:18:2.68:0,3,11	0/0:34,0:28:7.22:0,7,90	0/0:10,0:10:27.56:0,28,2344	0/0:13,0:13:21.07:0,21,1528	0/0:28,0:27:30.10:0,30,1671	./.	0/0:20,0:21:31.57:0,32,1539	0/0:15,0:14:24.14:0,24,1746	0/0:11,0:11:12.04:0,12,1020	0/0:14,0:14:6.02:0,6,496	0/0:13,0:12:18.53:0,19,1494	0/0:12,0:12:9.03:0,9,845	0/0:14,0:15:15.05:0,15,1069	0/0:9,0:9:15.05:0,15,1121	0/0:11,0:14:18.06:0,18,1145	0/0:16,0:16:16.60:0,17,1003	0/0:11,0:11:15.04:0,15,774	0/0:14,0:14:18.06:0,18,1642	0/0:32,0:31:48.14:0,48,3651	0/0:14,0:13:15.05:0,15,1165	0/0:12,0:13:12.04:0,12,868	0/0:27,0:28:48.16:0,48,3930	0/0:13,0:13:20.96:0,21,1394	0/1:19,12:30:99:517,0,253	1/1:7,10:18:12.04:673,12,0	1/1:6,6:10:9.03:519,9,0
chr10	2238560	.	AG	A	3068.95	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.825;DP=770;FS=4.595;HRun=2;HaplotypeScore=78.5431;InbreedingCoeff=0.9841;MQ=87.96;MQ0=0;MQRankSum=-4.008;QD=36.54;ReadPosRankSum=3.452;VQSLOD=4.4085;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,57:57:99:2181,169,0	0/0:10,0:10:30.10:0,30,450	0/0:31,0:31:90.23:0,90,1272	0/0:25,1:26:55.32:0,55,1044	0/0:25,0:25:69.22:0,69,1009	0/0:17,0:17:48.16:0,48,718	0/0:27,0:27:78.26:0,78,1167	0/0:40,0:40:99:0,120,1718	1/1:1,26:27:78.25:1009,78,0	0/0:34,0:33:96.33:0,96,1438	0/0:22,0:22:66.22:0,66,989	0/0:27,0:27:81.27:0,81,1214	0/0:38,0:38:99:0,114,1687	0/0:27,0:27:81.18:0,81,1145	0/0:27,0:27:81.27:0,81,1211	0/0:27,0:27:81.27:0,81,1211	0/0:32,0:32:87.28:0,87,1283	0/0:17,0:17:51.17:0,51,763	0/0:20,0:20:57.18:0,57,816	0/0:17,0:17:51.17:0,51,764	0/0:60,0:60:99:0,169,2492	0/0:28,0:28:84.27:0,84,1237	0/0:16,0:16:42.14:0,42,630	0/0:37,0:37:99:0,108,1596	0/0:25,0:25:72.24:0,72,1078	0/0:29,0:29:84.28:0,84,1259	0/0:23,0:23:63.21:0,63,944	0/0:4,0:4:12.04:0,12,180
chr10	2238654	.	CGT	C	759.07	PASS	AB=0.927;AC=24;AF=0.480;AN=50;BaseQRankSum=6.646;DP=654;FS=0.666;HRun=0;HaplotypeScore=90.6663;InbreedingCoeff=-0.2638;MQ=65.93;MQ0=12;MQRankSum=0.300;QD=1.56;ReadPosRankSum=1.990;VQSLOD=1.6527;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:29:8.44:73,8,0	0/1:7,1:8:26.11:26,0,36	./.	./.	0/1:19,0:19:26.05:26,0,38	0/1:18,0:18:17.14:17,0,123	0/0:24,1:25:12.04:0,12,176	./.	0/1:23,2:25:99:130,0,106	0/1:30,1:31:11.12:11,0,212	0/0:18,0:21:9.03:0,9,130	0/0:16,0:16:9.03:0,9,126	0/1:17,1:18:36.61:37,0,237	0/1:20,1:20:49.24:49,0,138	0/0:15,0:15:14.10:0,14,215	0/1:18,0:17:20.09:20,0,120	1/1:19,5:27:21.82:200,22,0	0/1:25,4:29:43.57:44,0,280	0/1:13,0:14:8.15:8,0,14	0/1:22,5:26:23.01:23,0,75	0/1:60,2:61:5.23:5,0,272	0/1:17,3:20:49.26:49,0,116	0/0:14,0:14:12.04:0,12,172	0/1:47,1:49:9.24:9,0,511	0/1:19,0:18:21.30:21,0,69	1/1:21,0:21:8.69:60,9,0	0/1:10,0:18:3.33:53,0,3	1/1:8,0:12:11.36:56,11,0
chr10	2239468	.	A	ACCAACCAACCAACCAACCAACC	6353.96	PASS	AB=0.770;AC=10;AF=0.179;AN=56;BaseQRankSum=2.989;DP=721;FS=7.002;HRun=0;HaplotypeScore=364.3798;InbreedingCoeff=0.6879;MQ=67.85;MQ0=10;MQRankSum=-9.055;QD=44.12;ReadPosRankSum=-0.134;VQSLOD=2.5154;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,150,6931	0/0:7,0:7:21.07:0,21,950	0/0:51,0:40:99:0,114,2125	0/0:57,0:43:99:0,106,2249	0/0:28,0:28:78.25:0,78,3509	0/0:21,0:21:63.10:0,63,2690	0/0:20,0:20:60.21:0,60,2346	1/1:0,0:24:66.21:1521,66,0	0/0:29,0:29:84.26:0,84,3592	0/0:29,0:29:84.27:0,84,3216	0/0:20,0:20:60.18:0,60,2489	0/0:18,0:18:54.17:0,54,2404	0/1:20,0:21:99:144,0,2912	0/0:19,0:19:57.18:0,57,2539	0/0:21,0:21:63.22:0,63,2992	0/0:20,0:20:57.20:0,57,2350	1/1:3,0:26:3.82:678,4,0	0/0:12,0:12:32.72:0,33,909	0/0:19,0:19:57.19:0,57,1470	0/0:23,0:23:69.22:0,69,2679	0/0:32,0:32:96.31:0,96,3252	0/0:22,0:22:66.22:0,66,3203	0/0:19,0:19:57.18:0,57,2058	0/0:33,0:33:99:0,99,4548	0/0:26,0:26:75.26:0,75,3766	0/1:3,13:29:99:2595,0,115	1/1:0,14:26:9.03:672,9,0	1/1:0,0:7:12.04:744,12,0
chr10	2240072	.	C	CT	5927.78	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-6.979;DP=662;FS=12.825;HRun=6;HaplotypeScore=64.5364;InbreedingCoeff=0.9991;MQ=68.14;MQ0=0;MQRankSum=-2.375;QD=32.04;ReadPosRankSum=0.330;VQSLOD=4.2147;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,49:49:99:1610,129,0	0/0:11,0:11:30.04:0,30,294	0/0:19,0:17:39.08:0,39,395	0/0:21,0:21:39.60:0,40,496	0/0:22,0:22:54.12:0,54,551	0/0:15,0:15:45.06:0,45,443	0/0:24,0:25:69.61:0,70,697	1/1:1,26:27:72.21:878,72,0	1/1:1,20:21:57.16:700,57,0	0/0:31,0:31:90.19:0,90,911	0/0:30,0:30:87.18:0,87,880	0/0:22,0:22:63.10:0,63,632	0/0:26,0:26:75.17:0,75,765	0/0:20,0:20:51.11:0,51,519	0/0:18,0:18:51.10:0,51,514	0/0:32,0:32:49.66:0,50,819	1/1:1,18:19:45.14:565,45,0	0/0:20,0:20:60.11:0,60,603	0/0:21,0:21:41.12:0,41,494	0/0:36,0:36:84.11:0,84,844	0/0:36,0:36:96.18:0,96,970	0/0:22,0:22:45.07:0,45,447	0/0:19,0:19:54.12:0,54,551	0/0:17,0:17:45.05:0,45,441	0/0:14,0:14:36.08:0,36,367	1/1:5,30:35:63.55:1081,64,0	1/1:2,23:25:66.21:829,66,0	1/1:0,9:9:21.07:264,21,0
chr10	2240541	.	A	AT	2497.50	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=3.199;DP=622;FS=0.424;HRun=9;HaplotypeScore=74.9011;InbreedingCoeff=0.9084;MQ=70.38;MQ0=0;MQRankSum=-0.514;QD=19.82;ReadPosRankSum=-0.837;VQSLOD=3.6249;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,105,900	0/0:14,0:14:32.98:0,33,286	0/1:15,0:14:2.99:3,0,102	0/0:13,0:13:25.74:0,26,196	0/0:26,0:26:77.96:0,78,670	0/0:20,0:20:56.80:0,57,475	0/0:23,0:23:62.99:0,63,547	1/1:11,20:31:37.12:637,37,0	0/0:18,0:18:53.99:0,54,468	0/0:30,0:30:68.96:0,69,599	0/0:21,0:21:62.97:0,63,543	0/0:20,0:20:53.78:0,54,453	0/0:14,0:14:35.99:0,36,313	0/0:20,0:20:44.96:0,45,391	0/0:17,0:17:50.99:0,51,443	0/0:13,0:13:32.99:0,33,286	0/0:17,0:17:44.99:0,45,390	0/0:11,0:11:32.99:0,33,286	0/0:21,0:22:53.01:0,53,449	0/0:35,0:35:98.96:0,99,856	0/0:14,0:14:35.95:0,36,306	0/0:36,1:37:56.78:0,57,722	0/0:36,1:38:69.65:0,70,811	0/0:15,0:15:35.98:0,36,313	0/0:22,0:22:62.92:0,63,534	1/1:5,31:36:67.16:950,67,0	1/1:4,27:31:43.73:704,44,0	1/1:1,12:13:33.09:365,33,0
chr10	2240891	.	C	CT	755.87	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-5.660;DP=660;FS=7.592;HRun=8;HaplotypeScore=61.4014;InbreedingCoeff=0.9821;MQ=81.67;MQ0=0;MQRankSum=-2.986;QD=25.20;ReadPosRankSum=1.351;VQSLOD=4.4659;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,26:30:75.18:851,75,0	0/0:9,0:9:27.01:0,27,247	0/0:19,0:19:44.99:0,45,402	0/0:14,0:15:14.88:0,15,188	0/0:30,0:29:84.04:0,84,769	0/0:27,0:27:72.01:0,72,649	0/0:23,0:23:63.03:0,63,577	0/0:38,1:39:87.04:0,87,796	0/0:34,0:34:84.03:0,84,769	0/0:27,0:27:72.03:0,72,656	0/0:24,0:24:63.03:0,63,576	0/0:26,0:26:66.02:0,66,600	0/0:23,0:23:63.02:0,63,572	0/0:26,0:26:75.03:0,75,683	0/0:18,0:18:48.01:0,48,435	0/0:16,0:16:48.03:0,48,439	0/0:17,0:17:42.02:0,42,384	0/0:16,0:16:28.16:0,28,384	0/0:18,0:18:45.02:0,45,412	0/0:27,0:27:72.02:0,72,654	0/0:25,0:25:69.03:0,69,631	0/0:35,0:35:87.01:0,87,788	0/0:28,0:28:75.01:0,75,677	0/0:18,0:18:51.03:0,51,467	0/0:17,0:17:47.75:0,48,418	0/0:29,0:29:66.01:0,66,600	0/0:26,0:25:75.03:0,75,682	0/0:18,0:18:51.03:0,51,467
chr10	2241340	.	A	ATCTC	1735.36	PASS	AB=0.938;AC=25;AF=0.521;AN=48;BaseQRankSum=-1.435;DP=551;FS=28.388;HRun=0;HaplotypeScore=111.4771;InbreedingCoeff=0.2358;MQ=57.15;MQ0=13;MQRankSum=-3.141;QD=5.32;ReadPosRankSum=-4.201;VQSLOD=-0.5386;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:15:8.66:0,9,132	0/1:9,0:9:0:0,0,0	./.	./.	0/1:20,0:20:31.09:104,0,31	0/1:22,5:28:0.77:22,0,1	0/1:17,0:16:2.73:31,0,3	./.	0/1:17,0:17:26.34:44,0,26	0/1:29,0:29:57.53:209,0,58	1/1:28,0:27:18.05:270,18,0	1/1:8,0:10:3.01:52,3,0	1/1:14,0:13:9.03:157,9,0	0/1:15,0:18:0:0,0,0	0/0:11,0:11:9.03:0,9,130	1/1:12,0:12:15.94:299,16,0	0/0:28,0:28:11.83:0,12,170	0/1:16,1:15:8.50:179,0,9	1/1:11,0:10:2.03:5,2,0	0/0:25,0:25:6.96:0,7,81	1/1:23,0:22:14.89:205,15,0	0/0:29,0:28:0:0,0,0	0/1:21,1:27:33.39:70,0,33	1/1:16,0:14:6:50,6,0	1/1:29,0:29:8.86:184,9,0	0/0:20,0:19:27.07:0,27,368	0/0:21,0:21:1.83:0,2,73	./.
chr10	2241374	.	C	CTGTGTG	76.93	PASS	AB=1.000;AC=4;AF=0.071;AN=56;BaseQRankSum=3.778;DP=473;FS=8.397;HRun=0;HaplotypeScore=113.2650;InbreedingCoeff=0.2894;MQ=48.08;MQ0=27;MQRankSum=-0.888;QD=2.14;ReadPosRankSum=3.708;VQSLOD=1.5681;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:17:11.95:0,12,143	0/0:3,0:3:9.03:0,9,213	0/0:16,0:6:18.06:0,18,332	0/0:6,0:2:6.02:0,6,131	0/0:19,0:16:17.84:0,18,426	0/0:22,0:22:25.31:0,25,521	0/0:16,0:15:30.10:0,30,654	0/0:23,0:21:62.72:0,63,901	1/1:6,8:14:6.02:150,6,0	0/0:24,0:23:66.22:0,66,1365	0/0:25,0:24:50.37:0,50,902	0/1:7,0:7:18.64:19,0,65	0/1:14,0:13:7.62:8,0,398	0/0:14,0:14:11.84:0,12,210	0/0:13,0:13:20.78:0,21,428	0/0:10,0:10:19.97:0,20,347	0/0:27,0:27:28.13:0,28,517	0/0:18,0:16:38.88:0,39,522	0/0:6,0:4:12.01:0,12,227	0/0:29,0:28:70.10:0,70,1458	0/0:23,0:21:9.78:0,10,386	0/0:14,0:13:15.51:0,16,267	0/0:25,0:23:30.04:0,30,568	0/0:14,0:12:24.08:0,24,508	0/0:16,0:16:18.98:0,19,507	0/0:30,0:28:84.17:0,84,1534	0/0:21,0:20:11.67:0,12,281	0/0:4,0:3:5.75:0,6,39
chr10	2241384	.	C	CTGTGTGTG	1962.24	PASS	AB=0.871;AC=10;AF=0.179;AN=56;BaseQRankSum=3.442;DP=485;FS=6.556;HRun=0;HaplotypeScore=125.6407;InbreedingCoeff=0.3321;MQ=49.51;MQ0=21;MQRankSum=-2.942;QD=14.32;ReadPosRankSum=-1.149;VQSLOD=2.2081;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:17,0:15:1.75:22,0,2	0/0:4,0:4:12.04:0,12,334	0/0:17,0:9:21.02:0,21,457	0/0:8,0:2:6.02:0,6,155	0/0:23,0:21:46.64:0,47,931	0/0:20,0:20:21.09:0,21,495	0/0:19,0:18:38.55:0,39,924	0/1:23,0:22:99:635,0,102	1/1:15,0:14:12.51:288,13,0	0/0:24,0:23:41.18:0,41,1278	0/0:22,0:21:48.15:0,48,1101	0/1:9,0:9:20.39:20,0,122	0/1:13,0:12:19.63:20,0,479	0/0:14,0:14:8.03:0,8,257	0/0:13,0:13:18.44:0,18,405	0/0:13,0:13:29.88:0,30,616	0/0:10,0:28:10.83:0,11,104	0/0:18,0:16:12.14:0,12,608	0/0:6,0:4:12:0,12,188	0/0:28,0:27:66.22:0,66,1765	0/0:22,0:21:31.76:0,32,617	0/0:12,0:12:12.51:0,13,346	0/0:26,0:24:39.56:0,40,910	0/0:14,0:12:27.08:0,27,639	0/0:17,0:17:38.91:0,39,752	0/1:14,15:28:99:916,0,131	0/1:7,17:25:0.22:54,0,0	1/1:4,0:3:6.02:154,6,0
chr10	2242432	.	CCA	C	389.64	PASS	AB=0.945;AC=5;AF=0.089;AN=56;BaseQRankSum=6.947;DP=679;FS=10.085;HRun=0;HaplotypeScore=117.5033;InbreedingCoeff=-0.1024;MQ=68.74;MQ0=4;MQRankSum=-6.469;QD=2.69;ReadPosRankSum=-3.955;VQSLOD=0.4666;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:31,1:31:64.12:64,0,672	0/0:8,0:8:24.07:0,24,452	0/0:40,0:36:99:0,105,1832	0/0:37,0:35:76.62:0,77,1395	0/0:28,0:28:84.27:0,84,1644	0/0:27,0:27:81.28:0,81,1644	0/0:19,0:19:57.18:0,57,1101	0/1:19,9:25:99:313,0,860	0/1:22,0:22:47.99:48,0,642	0/0:32,0:32:96.19:0,96,1879	0/0:17,0:17:51.16:0,51,981	0/0:18,0:18:54.17:0,54,1059	0/0:27,0:27:81.27:0,81,1550	0/0:14,0:14:42.14:0,42,801	0/0:21,0:21:63.22:0,63,1224	0/0:15,0:15:45.15:0,45,911	0/0:27,0:27:59.60:0,60,896	0/0:20,0:20:60.21:0,60,1211	0/0:26,0:25:75.23:0,75,1394	0/0:37,0:37:99:0,111,2182	0/0:17,0:17:45.14:0,45,877	0/0:27,0:27:81.26:0,81,1577	0/0:24,0:24:72.25:0,72,1418	0/0:30,0:30:90.25:0,90,1715	0/0:19,0:19:57.20:0,57,1142	0/1:32,0:31:54.06:54,0,1215	0/1:31,0:31:28.20:28,0,1251	0/0:2,0:2:6.02:0,6,92
chr10	2242434	.	A	AAAACAAAC	6411.13	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=7.185;DP=689;FS=7.956;HRun=0;HaplotypeScore=186.7559;InbreedingCoeff=0.8599;MQ=68.14;MQ0=4;MQRankSum=-11.219;QD=36.02;ReadPosRankSum=-3.420;VQSLOD=2.8958;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,21:32:57.06:2043,57,0	0/0:7,0:7:18.06:0,18,403	0/0:44,0:39:53.52:0,54,964	0/0:40,0:37:24.75:0,25,654	0/0:29,0:29:60.21:0,60,1409	0/0:27,0:27:75.26:0,75,1851	0/0:18,0:18:42.13:0,42,844	1/1:34,0:31:45.13:869,45,0	1/1:20,0:21:21.07:704,21,0	0/0:33,0:33:90.28:0,90,1931	0/0:16,0:16:33.11:0,33,755	0/0:17,0:17:45.15:0,45,1054	0/0:26,0:26:75.26:0,75,1797	0/0:13,0:13:30.10:0,30,747	0/0:21,0:21:54.18:0,54,1152	0/0:15,0:15:30.10:0,30,740	1/1:12,12:26:21.53:701,22,0	0/0:21,0:21:57.19:0,57,1316	0/0:26,0:25:42.12:0,42,872	0/0:38,0:38:87.30:0,87,2107	0/0:17,0:17:33.11:0,33,774	0/0:27,0:27:66.22:0,66,1513	0/0:25,0:25:66.20:0,66,1554	0/0:31,0:31:69.22:0,69,1571	0/0:19,0:19:51.17:0,51,1141	0/1:33,0:32:99:1174,0,105	1/1:29,0:29:24.08:818,24,0	1/1:2,0:2:3.01:102,3,0
chr10	2242443	.	A	AAACAAACAAACAAACG	13397.56	PASS	AB=0.866;AC=11;AF=0.196;AN=56;BaseQRankSum=1.442;DP=703;FS=2.829;HRun=0;HaplotypeScore=282.6490;InbreedingCoeff=0.6699;MQ=64.08;MQ0=4;MQRankSum=-12.446;QD=71.64;ReadPosRankSum=0.202;VQSLOD=4.4463;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:33:1.61:784,0,2	0/0:9,0:9:24.06:0,24,783	0/0:42,0:36:78.12:0,78,1622	0/0:43,0:38:38.34:0,38,1331	0/0:26,0:26:63.20:0,63,2384	0/0:27,0:27:75.26:0,75,3271	0/0:18,0:18:45.12:0,45,1358	1/1:34,0:31:75.95:2418,76,0	1/1:6,12:26:24.55:1776,25,0	0/0:35,0:35:99:0,102,3442	0/0:15,0:15:36.11:0,36,1289	0/0:17,0:17:45.15:0,45,1832	0/0:28,0:28:84.25:0,84,3149	0/0:13,0:13:36.10:0,36,1386	0/0:26,0:26:66.17:0,66,1970	0/0:15,0:15:33.10:0,33,1285	0/1:24,0:24:55.47:222,0,55	0/0:21,0:21:60.19:0,60,2225	0/0:26,0:25:54.10:0,54,1537	0/0:39,0:39:99:0,99,3709	0/0:17,0:17:39.08:0,39,1357	0/0:27,0:27:72.20:0,72,2597	0/0:25,0:25:72.22:0,72,2746	0/0:28,0:28:75.24:0,75,2774	0/0:19,0:19:51.17:0,51,1899	0/1:12,17:36:99:4370,0,181	1/1:17,8:30:54.18:3595,54,0	1/1:0,1:3:3.01:232,3,0
chr10	2251691	.	CCAAA	C	691.56	PASS	AB=0.548;AC=1;AF=0.018;AN=56;BaseQRankSum=5.530;DP=709;FS=2.264;HRun=0;HaplotypeScore=91.8138;InbreedingCoeff=-0.0196;MQ=53.38;MQ0=36;MQRankSum=2.639;QD=30.07;ReadPosRankSum=1.887;VQSLOD=3.7914;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:27:63.22:0,63,1647	0/0:12,0:12:36.12:0,36,958	0/0:43,0:4:12.04:0,12,329	0/0:31,0:9:24:0,24,648	0/0:30,0:30:87.29:0,87,2277	0/0:24,0:24:63.20:0,63,1669	0/0:16,0:15:45.15:0,45,1232	0/0:36,0:22:54.17:0,54,1414	0/0:24,0:23:66.18:0,66,1744	0/0:44,0:43:99:0,126,3420	0/0:38,0:38:99:0,114,3107	0/0:18,0:18:48.16:0,48,1315	0/0:27,0:27:75.26:0,75,2024	0/0:22,0:22:54.19:0,54,1462	0/0:26,0:25:66.20:0,66,1687	0/0:17,0:17:42.14:0,42,1151	0/1:4,19:22:42.58:766,0,43	0/0:26,0:25:60.21:0,60,1606	0/0:15,0:10:30.10:0,30,759	0/0:34,0:34:99:0,102,2753	0/0:14,0:14:36.06:0,36,922	0/0:29,0:29:84.29:0,84,2293	0/0:23,0:23:69.24:0,69,1835	0/0:27,0:23:63.21:0,63,1671	0/0:15,0:15:45.11:0,45,1164	0/0:29,0:29:87.30:0,87,2322	0/0:30,0:29:90.31:0,90,2415	0/0:8,0:7:18.06:0,18,482
chr10	2253139	.	G	GC	1006.23	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=8.389;DP=566;FS=1.730;HRun=8;HaplotypeScore=71.7613;InbreedingCoeff=0.8193;MQ=89.94;MQ0=0;MQRankSum=-3.856;QD=8.18;ReadPosRankSum=-3.343;VQSLOD=0.9318;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:34,0:34:11.44:11,0,267	0/0:12,0:12:35.99:0,36,323	0/0:29,0:30:64.40:0,64,614	0/0:20,0:20:10.48:0,10,278	0/0:25,0:25:66.02:0,66,603	0/0:19,0:19:48.01:0,48,439	0/0:17,0:17:45.02:0,45,412	1/1:13,0:16:10.26:119,10,0	0/0:19,0:19:52.03:0,52,276	0/0:23,0:23:60.02:0,60,546	0/0:11,0:11:27.01:0,27,247	0/0:22,0:22:51:0,51,462	0/0:19,0:19:48:0,48,432	0/0:17,0:17:45.02:0,45,412	0/0:26,0:26:72.03:0,72,658	0/0:21,0:21:54.03:0,54,494	1/1:8,27:36:43.75:646,44,0	0/0:21,0:21:57.02:0,57,521	0/0:17,0:17:45.02:0,45,411	0/0:25,0:26:65.06:0,65,582	0/0:36,0:36:93.03:0,93,845	0/0:11,0:11:33:0,33,295	0/0:12,0:12:32.97:0,33,294	0/0:27,1:28:40.42:0,40,624	0/0:11,0:11:30:0,30,271	1/1:10,0:13:4.83:159,5,0	1/1:3,6:16:26.25:175,26,0	1/1:5,0:8:6.42:59,6,0
chr10	2253148	.	A	AC	1756.18	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=7.607;DP=583;FS=7.745;HRun=8;HaplotypeScore=73.4679;InbreedingCoeff=0.9669;MQ=89.29;MQ0=0;MQRankSum=-1.711;QD=20.42;ReadPosRankSum=-2.716;VQSLOD=2.4692;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:57.47:0,57,346	0/0:12,0:12:36.07:0,36,434	0/0:31,0:31:87.23:0,87,1092	0/0:19,0:19:40.68:0,41,524	0/0:27,0:27:81.22:0,81,1004	0/0:18,0:18:51.15:0,51,642	0/0:18,0:18:51.17:0,51,661	1/1:10,5:15:7.98:234,8,0	0/0:24,0:24:52.05:0,52,278	0/0:24,0:24:72.23:0,72,918	0/0:12,0:12:36.10:0,36,453	0/0:22,0:22:63.10:0,63,794	0/0:17,0:17:45.15:0,45,584	0/0:17,0:17:51.17:0,51,661	0/0:27,0:27:76.80:0,77,976	0/0:22,0:22:66.20:0,66,842	1/1:33,0:33:44.66:663,45,0	0/0:22,0:22:66.21:0,66,852	0/0:17,0:17:45.15:0,45,584	0/0:28,0:28:81.24:0,81,1015	0/0:36,0:36:99:0,105,1337	0/0:14,0:14:39.12:0,39,499	0/0:15,0:15:45.15:0,45,583	0/0:29,0:29:78.12:0,78,980	0/0:10,0:10:30.10:0,30,389	1/1:2,15:17:9.09:464,9,0	1/1:8,7:15:30.09:364,30,0	1/1:3,3:6:17.87:198,18,0
chr10	2253817	.	G	GTC	2071.01	PASS	AB=0.790;AC=5;AF=0.089;AN=56;BaseQRankSum=0.588;DP=806;FS=18.095;HRun=0;HaplotypeScore=149.5905;InbreedingCoeff=0.2174;MQ=54.19;MQ0=17;MQRankSum=-2.216;QD=16.84;ReadPosRankSum=-0.438;VQSLOD=2.6083;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:29:17.71:0,18,131	0/0:10,0:10:29.94:0,30,356	0/0:29,0:9:15.90:0,16,197	0/0:53,0:17:26.67:0,27,304	0/0:24,0:24:63.20:0,63,875	0/0:28,0:28:72.14:0,72,968	0/0:19,0:19:54.15:0,54,734	0/1:29,13:40:99:726,0,359	0/0:29,0:29:39.91:0,40,287	0/0:20,0:20:51.17:0,51,730	0/0:18,0:18:39.07:0,39,497	0/0:25,0:25:69.20:0,69,947	0/0:27,0:27:78.18:0,78,1049	0/0:23,0:23:64.44:0,64,884	0/0:42,0:42:99:0,114,1568	0/0:26,0:26:75.21:0,75,1028	0/0:9,0:9:14.37:0,14,102	0/0:13,0:13:36.07:0,36,474	0/0:21,0:20:54.14:0,54,754	0/0:37,0:37:98.46:0,98,1389	0/0:58,0:58:99:0,169,2396	0/0:36,0:36:87.25:0,87,1197	0/0:27,0:27:75.24:0,75,1048	0/0:55,0:55:99:0,144,2014	0/0:23,0:22:60.20:0,60,857	0/1:34,8:41:99:1031,0,236	0/1:23,10:32:20.82:371,0,21	1/1:0,6:6:3.01:55,3,0
chr10	2253847	.	CTGTGTGTGTGCGTGTGTGTG	C	3718.92	PASS	AB=0.659;AC=13;AF=0.232;AN=56;BaseQRankSum=10.361;DP=711;FS=1.247;HRun=0;HaplotypeScore=337.7655;InbreedingCoeff=0.7481;MQ=51.75;MQ0=19;MQRankSum=-9.596;QD=27.34;ReadPosRankSum=-1.425;VQSLOD=1.5574;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:13,6:17:0.48:1,0,0	0/0:10,0:10:24.08:0,24,1992	0/0:22,0:5:14.91:0,15,275	0/0:23,0:2:6.02:0,6,67	0/0:28,0:28:69.04:0,69,5112	0/0:30,0:30:63.17:0,63,4042	0/0:18,0:18:42.14:0,42,2743	1/1:30,0:25:39.04:597,39,0	1/1:15,11:25:18.06:598,18,0	0/0:22,0:22:57.19:0,57,4268	0/0:23,0:23:51.61:0,52,4121	0/0:19,0:19:48.15:0,48,2898	0/0:30,0:30:72.19:0,72,4720	0/0:31,0:30:84.24:0,84,5998	0/0:36,0:36:95.96:0,96,5789	0/0:23,0:23:54.18:0,54,3535	1/1:3,5:8:2.96:125,3,0	0/0:14,0:14:36.12:0,36,2281	0/0:17,0:15:36.08:0,36,1539	0/0:36,0:36:85.89:0,86,5804	0/0:52,0:52:99:0,138,8847	0/0:29,0:29:66.22:0,66,4569	0/0:33,0:32:78.21:0,78,4856	0/0:53,0:53:99:0,132,9296	0/0:26,0:26:69.22:0,69,4810	0/1:14,15:27:99:1758,0,221	1/1:4,18:22:12.04:609,12,0	1/1:2,0:1:3.01:31,3,0
chr10	2253848	.	T	TGA	1274.80	PASS	AB=0.898;AC=10;AF=0.179;AN=56;BaseQRankSum=9.663;DP=695;FS=2.762;HRun=0;HaplotypeScore=128.6270;InbreedingCoeff=0.6602;MQ=51.88;MQ0=19;MQRankSum=-10.513;QD=10.71;ReadPosRankSum=-1.030;VQSLOD=3.5314;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:10,2:12:0.09:0,0,0	0/0:10,0:10:27.08:0,27,387	0/0:23,0:5:15.05:0,15,208	0/0:23,0:2:6.02:0,6,91	0/0:28,0:28:69.23:0,69,1026	0/0:29,0:29:69.20:0,69,988	0/0:18,0:18:42.13:0,42,620	1/1:15,14:25:52.85:717,53,0	0/1:24,2:25:9.74:137,0,10	0/0:22,0:22:57.19:0,57,851	0/0:22,0:22:54.15:0,54,756	0/0:19,0:19:51.13:0,51,715	0/0:29,0:29:81.21:0,81,1108	0/0:31,0:30:87.26:0,87,1252	0/0:36,0:36:99:0,102,1433	0/0:23,0:23:66.17:0,66,923	0/0:7,0:7:3.01:0,3,31	0/0:14,0:14:35.78:0,36,484	0/0:17,0:15:42.06:0,42,584	0/0:35,0:35:99:0,99,1387	0/0:52,0:52:99:0,147,2083	0/0:28,0:28:72.21:0,72,1032	0/0:32,0:31:87.23:0,87,1200	0/0:52,0:52:99:0,144,2017	0/0:26,0:26:66.69:0,67,997	1/1:24,4:26:1.07:459,1,0	1/1:19,2:20:7.44:51,7,0	1/1:1,1:1:3.01:50,3,0
chr10	2253858	.	CGT	C	311.38	PASS	AB=0.931;AC=15;AF=0.278;AN=54;BaseQRankSum=6.385;DP=670;FS=11.101;HRun=0;HaplotypeScore=114.5042;InbreedingCoeff=-0.0622;MQ=52.16;MQ0=19;MQRankSum=-1.163;QD=1.02;ReadPosRankSum=1.655;VQSLOD=1.2155;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:10,0:10:0.02:0,0,0	0/1:10,0:10:8.89:9,0,340	0/0:28,0:7:5.98:0,6,53	0/0:27,0:4:4.26:0,4,51	0/0:26,2:28:60.19:0,60,931	0/1:29,0:29:28.25:28,0,737	0/0:17,4:21:3.14:0,3,479	0/0:20,0:17:0:0,0,1	1/1:14,0:13:8.05:36,8,0	0/1:24,0:24:14.62:15,0,721	0/1:18,4:22:23.73:24,0,619	0/1:14,4:18:71.62:72,0,377	0/0:25,2:27:18.51:0,19,743	0/0:30,0:29:72.24:0,72,1098	0/1:30,3:35:5.74:6,0,824	0/0:19,0:19:6.65:0,7,577	0/0:5,0:5:2.98:0,3,21	0/1:13,1:15:41.89:42,0,253	0/0:15,0:12:15.03:0,15,213	0/0:31,3:34:1.17:0,1,920	0/0:52,0:53:86.71:0,87,1475	0/0:30,0:30:66.19:0,66,970	0/1:26,3:28:47.69:48,0,709	0/1:48,6:53:65.35:65,0,1413	0/0:26,0:26:54.18:0,54,830	0/1:24,0:22:68.44:81,0,68	1/1:21,0:20:7.12:32,7,0	./.
chr10	2256158	.	TG	T	909.42	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.839;DP=676;FS=10.906;HRun=3;HaplotypeScore=67.5689;InbreedingCoeff=0.9969;MQ=88.07;MQ0=0;MQRankSum=-3.449;QD=32.48;ReadPosRankSum=2.249;VQSLOD=3.5281;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,108,1535	0/0:8,0:8:24.08:0,24,346	0/0:24,0:24:72.21:0,72,977	0/0:32,0:32:79.26:0,79,1171	0/0:32,0:32:87.28:0,87,1235	0/0:21,0:21:63.19:0,63,873	0/0:19,0:19:54.18:0,54,777	0/0:20,0:20:60.16:0,60,827	1/1:1,27:28:81.25:1004,81,0	0/0:35,0:35:99:0,99,1375	0/0:16,0:16:48.16:0,48,691	0/0:16,0:16:48.16:0,48,691	0/0:18,0:18:48.16:0,48,691	0/0:27,0:27:81.27:0,81,1165	0/0:28,0:28:84.26:0,84,1173	0/0:27,0:27:78.25:0,78,1105	0/0:32,0:32:96.32:0,96,1367	0/0:20,0:20:60.16:0,60,840	0/0:23,0:23:63.20:0,63,889	0/0:22,0:22:66.21:0,66,930	0/0:42,0:41:99:0,117,1647	0/0:25,0:25:75.23:0,75,1043	0/0:26,0:26:78.26:0,78,1123	0/0:10,0:10:30.09:0,30,415	0/0:20,0:20:60.20:0,60,864	0/0:24,0:24:70.79:0,71,997	0/0:32,0:32:90.30:0,90,1289	0/0:11,0:11:30.10:0,30,432
chr10	2256948	.	GA	G	786.21	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.958;DP=628;FS=2.871;HRun=1;HaplotypeScore=65.5208;InbreedingCoeff=0.8167;MQ=80.07;MQ0=0;MQRankSum=-2.394;QD=34.18;ReadPosRankSum=1.668;VQSLOD=3.6009;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:84.29:0,84,1343	0/0:10,0:10:30.10:0,30,476	0/0:19,0:19:54.18:0,54,865	0/0:13,0:13:39.13:0,39,623	0/0:33,0:33:93.32:0,93,1483	0/0:26,0:26:72.25:0,72,1151	0/0:17,0:17:51.16:0,51,792	0/0:32,0:32:96.31:0,96,1470	1/1:0,23:23:63.21:881,63,0	0/0:32,0:32:96.32:0,96,1516	0/0:30,0:30:90.29:0,90,1412	0/0:26,0:26:78.25:0,78,1220	0/0:24,0:24:72.23:0,72,1123	0/0:18,0:18:54.18:0,54,862	0/0:29,0:29:87.27:0,87,1344	0/0:15,1:16:6.19:0,6,654	0/0:22,0:22:66.20:0,66,1015	0/0:5,0:5:15.05:0,15,240	0/0:17,0:17:51.17:0,51,813	0/0:29,0:29:87.30:0,87,1385	0/0:18,0:18:54.17:0,54,840	0/0:21,0:21:63.18:0,63,939	0/0:27,0:27:81.23:0,81,1225	0/0:32,0:32:96.30:0,96,1477	0/0:20,0:20:60.19:0,60,936	0/0:15,0:15:45.14:0,45,679	0/0:43,0:41:99:0,129,2035	0/0:2,0:2:6.02:0,6,96
chr10	2257286	.	C	CG	4622.63	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=15.983;DP=734;FS=0.783;HRun=0;HaplotypeScore=87.1196;InbreedingCoeff=0.9976;MQ=66.35;MQ0=1;MQRankSum=-1.956;QD=38.20;ReadPosRankSum=1.584;VQSLOD=5.1259;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,132,1845	0/0:9,0:9:24.08:0,24,335	0/0:13,0:11:33.08:0,33,437	0/0:20,0:17:45.61:0,46,600	0/0:17,0:17:48.15:0,48,654	0/0:27,0:27:81.27:0,81,1132	0/0:30,0:30:90.30:0,90,1259	1/1:2,25:27:72.24:1031,72,0	1/1:0,26:26:72.24:1041,72,0	0/0:24,0:24:69.22:0,69,951	0/0:14,0:14:42.13:0,42,564	0/0:27,0:27:81.27:0,81,1132	0/0:31,0:31:90.30:0,90,1257	0/0:25,0:25:75.22:0,75,1011	0/0:41,0:41:99:0,123,1702	0/0:24,0:24:72.22:0,72,988	0/0:39,0:39:99:0,117,1636	0/0:23,0:23:63.21:0,63,878	0/0:27,0:27:75.24:0,75,1031	0/0:36,0:36:99:0,108,1503	0/0:45,0:45:99:0,135,1884	0/0:19,0:19:54.18:0,54,754	0/0:20,0:20:57.19:0,57,793	0/0:34,0:34:99:0,102,1384	0/0:24,0:24:69.23:0,69,965	1/1:1,28:29:45.39:1118,45,0	1/1:1,31:32:83.09:1175,83,0	1/1:0,7:7:18.06:257,18,0
chr10	2257991	.	TCCACCACCACCACC	T	257.57	PASS	AC=2;AF=0.038;AN=52;BaseQRankSum=2.445;DP=316;FS=0.000;HRun=0;HaplotypeScore=127.7864;InbreedingCoeff=0.6942;MQ=72.31;MQ0=2;MQRankSum=-3.091;QD=13.56;ReadPosRankSum=-1.204;VQSLOD=2.3249;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:20:45.08:0,45,2046	./.	0/0:11,0:11:32.65:0,33,910	0/0:8,0:6:18.06:0,18,657	0/0:8,0:8:15.05:0,15,776	0/0:9,0:9:27.09:0,27,1227	0/0:17,0:17:49.04:0,49,2396	0/0:34,0:34:96.33:0,96,5494	1/1:0,19:19:9.03:340,9,0	0/0:11,0:10:30.10:0,30,1647	0/0:2,0:2:3.01:0,3,154	0/0:6,0:6:15.05:0,15,737	0/0:11,0:11:33.10:0,33,1645	0/0:9,0:9:24.07:0,24,1104	0/0:7,0:7:20.87:0,21,589	0/0:12,0:12:33.11:0,33,1822	0/0:12,0:11:30.10:0,30,1563	0/0:11,0:11:33.11:0,33,1766	0/0:15,0:14:42.11:0,42,1962	0/0:5,0:5:12.04:0,12,541	0/0:17,0:15:26.63:0,27,1050	0/0:8,0:7:18.05:0,18,836	0/0:3,0:3:9.03:0,9,500	0/0:17,0:17:41.66:0,42,1869	0/0:8,0:8:24.08:0,24,1335	0/0:15,0:14:42.08:0,42,2345	0/0:20,0:20:55.65:0,56,3131	./.
chr10	2258091	.	C	CCCT	42.61	PASS	AB=1.000;AC=8;AF=0.148;AN=54;BaseQRankSum=4.346;DP=208;FS=10.088;HRun=0;HaplotypeScore=51.0276;InbreedingCoeff=0.1584;MQ=48.04;MQ0=2;MQRankSum=-2.276;QD=0.62;ReadPosRankSum=0.444;VQSLOD=-0.4219;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:15:32.93:0,33,382	0/0:2,0:2:2.70:0,3,19	0/0:11,0:3:9.03:0,9,131	0/0:15,0:8:11.74:0,12,164	0/0:7,0:7:12.04:0,12,180	0/1:7,0:6:7.70:8,0,107	0/0:4,0:4:6.02:0,6,91	0/1:14,0:14:1.36:47,0,1	1/1:13,0:14:3.02:36,3,0	0/1:6,0:6:37.49:37,0,72	0/0:2,0:2:2.54:0,3,45	0/0:9,0:9:20.52:0,21,235	0/0:1,0:1:3.01:0,3,45	0/0:4,0:3:1.93:0,2,5	0/0:4,0:3:6.39:0,6,42	0/0:12,0:12:21.52:0,22,286	0/0:3,0:3:2.91:0,3,40	0/0:6,0:6:11.81:0,12,117	0/0:2,0:1:2.99:0,3,23	0/0:3,0:3:6.02:0,6,82	0/1:14,0:13:0.47:0,0,32	0/0:8,0:8:5.95:0,6,71	0/0:6,0:6:10.19:0,10,88	0/0:8,0:8:12.14:0,12,147	0/0:3,0:3:6.01:0,6,61	1/1:13,0:13:0.87:25,1,0	0/0:7,4:11:8.97:0,9,33	./.
chr10	2259324	.	CACAAA	C	2150.83	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=9.853;DP=508;FS=83.706;HRun=0;HaplotypeScore=93.6927;InbreedingCoeff=0.9883;MQ=56.16;MQ0=43;MQRankSum=-8.803;QD=43.02;ReadPosRankSum=-1.095;VQSLOD=0.4557;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:41:99:0,117,3665	0/0:11,0:11:33.11:0,33,1098	0/0:18,0:14:42.01:0,42,1199	0/0:13,0:10:29.84:0,30,911	0/0:19,0:19:54.10:0,54,1714	0/0:17,0:15:45.10:0,45,1412	0/0:10,0:8:24.08:0,24,798	1/1:3,18:18:51.13:947,51,0	0/0:17,0:16:45.09:0,45,1375	0/0:30,0:27:81.22:0,81,2519	0/0:16,0:15:42.14:0,42,1262	0/0:22,0:22:63.22:0,63,2029	0/0:16,0:15:45.15:0,45,1496	0/0:17,0:14:42.14:0,42,1366	0/0:17,0:14:42.14:0,42,1334	0/0:13,0:9:27.09:0,27,868	0/0:12,0:10:30.10:0,30,927	0/0:9,0:7:21.07:0,21,699	0/0:21,0:19:54.19:0,54,1744	0/0:30,0:30:86.96:0,87,2471	0/0:29,0:28:72.25:0,72,2394	0/0:29,0:29:75.26:0,75,2481	0/0:15,0:15:38.71:0,39,1265	0/0:15,0:14:42.14:0,42,1396	0/0:18,0:18:54.19:0,54,1767	1/1:1,12:13:33.04:600,33,0	1/1:2,8:8:24.08:506,24,0	1/1:1,5:5:12.04:255,12,0
chr10	2262269	.	C	CA	2171.91	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-8.303;DP=798;FS=3.274;HRun=1;HaplotypeScore=75.6455;InbreedingCoeff=0.9994;MQ=68.52;MQ0=0;MQRankSum=-3.705;QD=38.78;ReadPosRankSum=2.216;VQSLOD=4.4619;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,55:56:99:2267,153,0	0/0:10,0:10:30.10:0,30,389	0/0:25,0:25:72.20:0,72,896	0/0:22,0:20:57.10:0,57,714	0/0:26,0:26:75.23:0,75,958	0/0:27,0:27:75.22:0,75,946	0/0:35,0:35:99:0,105,1363	0/0:24,0:24:63.20:0,63,817	0/0:34,0:34:99:0,102,1308	0/0:34,0:34:99:0,99,1275	0/0:17,0:17:51.14:0,51,631	0/0:24,0:24:69.22:0,69,895	0/0:37,0:37:99:0,111,1440	0/0:31,0:31:93.30:0,93,1207	0/0:47,0:46:99:0,141,1816	0/0:27,0:27:81.26:0,81,1051	0/0:32,0:32:96.31:0,96,1244	0/0:15,0:15:39.08:0,39,487	0/0:17,0:17:48.16:0,48,623	0/0:31,0:31:90.29:0,90,1168	0/0:62,0:62:99:0,184,2346	0/0:27,0:27:78.24:0,78,999	0/0:15,0:15:45.13:0,45,570	0/0:30,0:30:84.27:0,84,1089	0/0:22,0:22:60.18:0,60,765	0/0:29,0:29:81.26:0,81,1051	0/0:27,0:27:81.21:0,81,1005	0/0:15,0:15:45.15:0,45,584
chr10	2264008	.	T	TA	2735.53	PASS	AC=8;AF=0.148;AN=54;BaseQRankSum=2.785;DP=595;FS=0.431;HRun=6;HaplotypeScore=62.2508;InbreedingCoeff=0.9934;MQ=77.86;MQ0=0;MQRankSum=-2.688;QD=26.56;ReadPosRankSum=-1.926;VQSLOD=3.0834;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:45.10:0,45,459	0/0:14,0:14:42.03:0,42,410	0/0:21,0:20:38.74:0,39,356	0/0:13,0:13:28.88:0,29,280	0/0:29,0:29:68.28:0,68,702	0/0:18,0:18:54.12:0,54,551	0/0:22,0:22:60.12:0,60,605	1/1:5,21:26:63.20:792,63,0	1/1:16,0:16:41.66:293,42,0	0/0:34,0:34:93.21:0,93,948	0/0:34,0:34:93.19:0,93,938	0/0:16,0:16:42.08:0,42,422	0/0:23,0:23:66.15:0,66,672	0/0:18,0:18:54.12:0,54,551	0/0:26,0:26:78.18:0,78,796	0/0:21,0:21:57.13:0,57,581	0/0:13,0:13:35.98:0,36,345	0/0:12,0:12:33.07:0,33,337	0/0:13,0:13:36.03:0,36,352	0/0:31,0:31:87.18:0,87,880	0/0:11,0:11:27.04:0,27,268	0/0:34,0:34:99:0,102,1040	0/0:33,0:33:99:0,99,1010	0/0:10,0:10:27.04:0,27,268	0/0:28,0:28:78.15:0,78,783	1/1:3,23:26:13.97:789,14,0	1/1:4,31:34:81.26:1019,81,0	./.
chr10	2264010	.	A	AG	1034.82	PASS	AB=1.000;AC=6;AF=0.111;AN=54;BaseQRankSum=9.079;DP=597;FS=0.897;HRun=0;HaplotypeScore=67.4774;InbreedingCoeff=0.6239;MQ=76.45;MQ0=0;MQRankSum=-1.717;QD=10.35;ReadPosRankSum=-0.428;VQSLOD=3.3023;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:51.14:0,51,678	0/0:14,0:14:42.14:0,42,586	0/0:19,0:18:43.80:0,44,577	0/0:14,0:13:31.65:0,32,408	0/0:32,0:32:90.13:0,90,1137	0/0:20,0:20:60.17:0,60,804	0/0:22,0:22:63.20:0,63,865	0/1:25,0:25:45.08:131,0,45	1/1:0,15:15:42.14:643,42,0	0/0:32,0:32:93.31:0,93,1300	0/0:34,0:34:99:0,102,1379	0/0:15,0:15:45.14:0,45,614	0/0:23,0:23:66.22:0,66,920	0/0:18,0:18:54.18:0,54,755	0/0:26,0:26:78.26:0,78,1091	0/0:21,0:21:63.19:0,63,849	0/0:14,0:14:39.12:0,39,522	0/0:12,0:12:36.11:0,36,486	0/0:15,0:15:42.10:0,42,547	0/0:31,0:31:93.29:0,93,1269	0/0:11,0:11:33.08:0,33,428	0/0:34,0:34:99:0,102,1426	0/0:34,0:34:99:0,99,1384	0/0:11,0:11:30.09:0,30,403	0/0:28,0:28:84.26:0,84,1143	0/1:27,0:27:48.01:149,0,48	1/1:33,0:32:25.15:248,25,0	./.
chr10	2265175	.	TTA	T	325.92	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.461;DP=206;FS=1.219;HRun=0;HaplotypeScore=25.7303;InbreedingCoeff=0.2621;MQ=76.18;MQ0=3;MQRankSum=-2.391;QD=21.73;ReadPosRankSum=1.093;VQSLOD=3.5312;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:21.07:0,21,364	0/0:4,0:4:9.03:0,9,156	0/0:10,0:3:5.95:0,6,49	0/0:17,0:12:9.02:0,9,59	0/0:3,0:3:9.03:0,9,156	0/0:2,0:2:6.02:0,6,104	0/0:3,0:3:9.03:0,9,156	0/0:45,0:44:99:0,126,2024	0/0:2,0:2:6.02:0,6,104	0/0:13,0:13:33.10:0,33,544	0/0:6,0:6:12.03:0,12,181	0/0:2,0:2:6.02:0,6,104	0/0:1,0:1:3.01:0,3,52	0/0:5,0:5:12.04:0,12,208	0/0:1,0:1:3.01:0,3,52	0/0:4,0:4:6.02:0,6,104	1/1:5,10:14:33.07:419,33,0	0/0:20,0:20:54.13:0,54,862	0/0:4,0:4:6.02:0,6,104	0/0:5,0:5:9.03:0,9,156	0/0:1,0:1:3.01:0,3,52	0/0:1,0:1:3.01:0,3,52	0/0:3,0:3:6.02:0,6,104	0/0:1,0:1:3.01:0,3,52	0/0:7,0:7:21.07:0,21,350	0/0:4,0:4:9.03:0,9,154	0/0:6,0:6:18.06:0,18,309	0/0:10,0:10:30.10:0,30,519
chr10	2265206	.	T	TTA	724.45	PASS	AC=6;AF=0.115;AN=52;BaseQRankSum=-1.270;DP=175;FS=3.652;HRun=0;HaplotypeScore=21.7236;InbreedingCoeff=0.4492;MQ=80.96;MQ0=1;MQRankSum=-1.224;QD=19.58;ReadPosRankSum=2.289;VQSLOD=3.0775;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,8:8:18.06:301,18,0	0/0:2,0:2:6.01:0,6,65	1/1:10,0:5:1.25:3,1,0	0/0:20,0:12:1.52:0,2,28	0/0:3,0:3:9.03:0,9,115	0/0:2,0:2:6.02:0,6,76	./.	0/0:35,0:34:78.24:0,78,981	0/0:2,0:2:6.01:0,6,65	0/0:8,0:8:18.04:0,18,209	0/0:1,0:1:3.01:0,3,38	0/0:3,0:3:9.02:0,9,101	0/0:1,0:1:3.01:0,3,38	0/0:5,0:5:9.03:0,9,115	0/0:1,0:1:3.01:0,3,38	0/0:3,0:3:6.02:0,6,76	1/1:0,19:18:33.11:537,33,0	0/0:15,0:15:36.12:0,36,457	0/0:5,0:5:12.04:0,12,152	0/0:5,0:5:15.04:0,15,179	0/0:2,0:2:3.01:0,3,38	./.	0/0:2,0:2:6.02:0,6,76	0/0:2,0:2:6.02:0,6,76	0/0:4,0:4:9.03:0,9,115	0/0:4,0:4:9.03:0,9,115	0/0:7,0:7:21.05:0,21,252	0/0:5,0:5:9.01:0,9,90
chr10	2265650	.	GC	G	983.45	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.642;DP=621;FS=1.505;HRun=3;HaplotypeScore=59.8743;InbreedingCoeff=0.9916;MQ=87.43;MQ0=1;MQRankSum=-4.017;QD=29.80;ReadPosRankSum=1.191;VQSLOD=3.2036;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,144,2054	0/0:11,0:11:33.10:0,33,458	0/0:23,0:23:51.15:0,51,679	0/0:21,0:21:47.21:0,47,700	0/0:28,0:28:84.23:0,84,1166	0/0:19,0:19:57.18:0,57,803	0/0:14,0:14:42.13:0,42,587	0/0:30,0:30:81.22:0,81,1142	0/0:13,0:13:39.12:0,39,543	0/0:18,0:18:54.14:0,54,736	0/0:15,0:15:39.13:0,39,561	0/0:26,0:26:75.23:0,75,1045	0/0:18,0:18:51.16:0,51,717	0/0:19,0:19:57.18:0,57,804	0/0:20,0:20:60.20:0,60,864	0/0:17,0:17:51.17:0,51,734	1/1:1,32:33:87.27:1078,87,0	0/0:21,0:21:63.21:0,63,907	0/0:22,0:22:66.08:0,66,900	0/0:23,0:23:69.23:0,69,993	0/0:28,0:28:72.24:0,72,1036	0/0:19,0:19:54.16:0,54,739	0/0:18,0:18:45.15:0,45,646	0/0:21,0:21:60.19:0,60,845	0/0:29,0:28:81.24:0,81,1115	0/0:27,0:27:81.26:0,81,1146	0/0:32,0:32:93.19:0,93,1254	0/0:6,0:6:18.06:0,18,259
chr10	2266149	.	CCAG	C	2092.57	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.438;DP=421;FS=9.990;HRun=0;HaplotypeScore=61.5421;InbreedingCoeff=0.9164;MQ=90.12;MQ0=0;MQRankSum=-5.300;QD=38.75;ReadPosRankSum=4.237;VQSLOD=3.7803;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,33:33:63.22:1153,63,0	0/0:4,0:4:12.04:0,12,259	0/0:18,0:18:52.89:0,53,1054	0/0:19,0:19:34.07:0,34,1096	0/0:9,0:9:21.05:0,21,463	0/0:14,0:14:42.13:0,42,986	0/0:24,0:24:72.24:0,72,1644	0/0:25,0:25:75.25:0,75,1801	0/0:17,0:17:51.18:0,51,1256	0/0:14,0:14:42.14:0,42,1030	0/0:5,0:5:15.03:0,15,312	0/0:14,0:14:39.13:0,39,951	0/0:16,0:16:45.14:0,45,1047	0/0:5,0:5:15.03:0,15,320	0/0:25,0:25:75.25:0,75,1779	0/0:16,0:16:48.16:0,48,1150	1/1:0,21:21:57.20:1061,57,0	0/0:18,0:18:54.17:0,54,1282	0/0:11,0:11:33.11:0,33,796	0/0:10,0:10:30.09:0,30,690	0/0:27,0:27:78.22:0,78,1730	0/0:5,0:5:15.05:0,15,369	0/0:3,0:3:9.03:0,9,198	0/0:25,0:25:75.26:0,75,1848	0/0:4,0:4:12.04:0,12,296	0/0:20,0:20:60.18:0,60,1422	0/0:11,0:11:33.09:0,33,714	0/0:8,0:8:24.08:0,24,591
chr10	2266326	.	TTATATATATATATATATA	T	200.06	PASS	AC=2;AF=0.100;AN=20;BaseQRankSum=1.588;DP=104;FS=0.000;HRun=0;HaplotypeScore=46.3321;InbreedingCoeff=0.2713;MQ=75.30;MQ0=2;MQRankSum=-2.358;QD=40.01;ReadPosRankSum=0.914;VQSLOD=1.8663;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:4:3.01:0,3,120	./.	./.	./.	./.	./.	0/0:1,0:1:3.01:0,3,98	0/0:8,0:8:18.06:0,18,1027	1/1:0,4:5:6.02:274,6,0	./.	./.	./.	./.	./.	./.	./.	0/0:9,0:11:12.04:0,12,757	0/0:6,0:10:24.08:0,24,1689	./.	./.	0/0:4,0:4:3.01:0,3,208	./.	./.	0/0:0,0:1:3.01:0,3,237	0/0:3,0:4:3.01:0,3,156	0/0:1,0:1:3.01:0,3,108	./.	./.
chr10	2268177	.	G	GTC	1135.02	PASS	AB=1.000;AC=10;AF=0.185;AN=54;BaseQRankSum=7.985;DP=604;FS=6.437;HRun=0;HaplotypeScore=119.9619;InbreedingCoeff=0.4423;MQ=44.93;MQ0=57;MQRankSum=-2.830;QD=10.61;ReadPosRankSum=0.312;VQSLOD=3.1311;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:20:4.10:103,0,4	0/0:7,0:6:10.82:0,11,125	0/1:2,0:1:0:0,0,0	./.	0/0:36,0:31:40.63:0,41,627	0/0:26,0:22:45.10:0,45,563	0/0:34,0:25:46.37:0,46,551	0/0:27,0:11:21.53:0,22,249	0/0:19,0:17:8.99:0,9,100	0/0:35,0:24:66.18:0,66,810	0/0:23,0:18:27.07:0,27,337	0/0:23,0:20:23.84:0,24,288	0/0:20,0:19:39.50:0,40,501	0/0:13,0:13:25.92:0,26,316	0/0:31,0:26:29.73:0,30,343	0/0:23,0:19:35.86:0,36,382	0/1:17,0:15:27.34:72,0,27	0/0:20,0:15:35.97:0,36,437	0/0:19,0:6:12.01:0,12,140	0/0:21,0:18:42.10:0,42,536	0/0:56,0:50:95.97:0,96,1147	0/0:13,0:11:29.76:0,30,355	0/0:20,0:18:30.07:0,30,355	0/0:23,0:21:40.50:0,40,548	0/1:21,0:16:6.37:6,0,288	1/1:6,11:16:0.42:532,0,0	1/1:9,12:21:0.72:443,1,0	1/1:5,2:4:6.02:104,6,0
chr10	2268201	.	G	GTC	33.62	PASS	AB=0.964;AC=6;AF=0.120;AN=50;BaseQRankSum=4.199;DP=632;FS=0.000;HRun=0;HaplotypeScore=126.5627;InbreedingCoeff=0.3076;MQ=43.22;MQ0=77;MQRankSum=-2.465;QD=0.29;ReadPosRankSum=-2.675;VQSLOD=1.3698;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:22:0:0,0,0	0/0:10,0:9:23.98:0,24,251	./.	./.	0/0:27,0:21:27.06:0,27,553	0/0:31,0:27:44.69:0,45,653	0/0:37,0:27:43.89:0,44,547	0/1:31,0:10:5.70:6,0,131	0/1:17,1:17:3.40:3,0,36	0/0:28,0:18:47.87:0,48,569	0/0:28,0:22:36.10:0,36,452	0/0:23,0:21:28.90:0,29,340	0/0:21,0:20:35.92:0,36,445	0/0:16,0:15:14.64:0,15,194	0/0:33,0:30:50.92:0,51,618	0/0:23,0:21:42.11:0,42,515	0/0:15,0:13:12.51:0,13,179	0/0:18,0:14:30.10:0,30,382	0/0:25,0:9:16.29:0,16,194	0/0:20,0:16:36.12:0,36,464	0/0:61,0:55:99:0,112,1383	0/0:21,0:15:32.81:0,33,357	0/0:17,0:16:30.09:0,30,377	0/0:22,0:19:45.11:0,45,566	0/0:30,0:25:48.62:0,49,601	0/1:17,2:16:71.55:72,0,80	1/1:13,3:16:3.01:50,3,0	./.
chr10	2268213	.	CTCTCTG	C	256.56	PASS	AB=0.915;AC=8;AF=0.160;AN=50;BaseQRankSum=7.137;DP=623;FS=0.958;HRun=0;HaplotypeScore=138.6773;InbreedingCoeff=0.4506;MQ=43.57;MQ0=82;MQRankSum=-6.959;QD=2.25;ReadPosRankSum=-2.827;VQSLOD=1.6688;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:19:5.81:50,6,0	0/0:10,0:9:21.06:0,21,545	./.	./.	0/0:30,0:24:47.16:0,47,1213	0/0:36,0:32:60.20:0,60,1543	0/0:39,0:29:41.94:0,42,1201	1/1:30,3:9:8.46:41,8,0	0/1:15,4:15:10.33:59,0,10	0/0:29,0:17:42.12:0,42,1062	0/0:29,0:25:37.68:0,38,962	0/0:23,0:20:17.67:0,18,447	0/0:24,0:23:41.65:0,42,1076	0/0:15,0:12:15.05:0,15,474	0/0:29,0:26:51.16:0,51,1521	0/0:24,0:21:48.15:0,48,1232	0/1:14,0:11:18.84:53,0,19	0/0:20,0:14:39.13:0,39,1064	0/0:24,0:12:26.83:0,27,630	0/0:18,0:16:42.14:0,42,1182	0/0:60,0:54:90.26:0,90,2321	0/0:22,0:14:30.10:0,30,895	0/0:16,0:16:30.10:0,30,791	0/0:21,0:19:48.16:0,48,1170	0/0:31,0:27:51.02:0,51,1032	0/1:16,0:12:30.41:179,0,30	0/1:8,2:10:0:0,0,0	./.
chr10	2268217	.	CTG	C	117.82	PASS	AB=0.898;AC=8;AF=0.160;AN=50;BaseQRankSum=4.684;DP=608;FS=1.080;HRun=0;HaplotypeScore=100.7958;InbreedingCoeff=0.2591;MQ=43.39;MQ0=85;MQRankSum=-3.655;QD=1.07;ReadPosRankSum=-2.898;VQSLOD=1.4626;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:16:4.19:27,4,0	0/0:11,0:10:26.94:0,27,406	./.	./.	0/0:32,0:26:60.61:0,61,983	0/0:34,0:30:69.20:0,69,1192	0/0:34,0:25:48.44:0,48,907	0/1:28,5:8:69.83:70,0,119	0/1:14,5:15:34.98:91,0,35	0/0:29,0:17:39.86:0,40,802	0/0:27,0:23:38.80:0,39,623	0/0:23,0:20:17.48:0,17,316	0/0:23,0:22:43.85:0,44,797	0/0:14,0:11:14.73:0,15,287	0/0:28,0:25:55.03:0,55,993	0/0:24,1:22:50.95:0,51,885	0/1:13,1:11:29.76:30,0,102	0/0:20,0:15:45.08:0,45,789	0/0:24,0:10:20.11:0,20,474	0/0:19,0:17:42.09:0,42,762	0/0:61,0:55:97.30:0,97,1837	0/0:19,0:12:35.79:0,36,606	0/0:15,0:14:30.10:0,30,558	0/0:22,0:20:27.63:0,28,855	0/0:29,0:26:54.93:0,55,911	0/1:16,0:12:14.26:14,0,66	1/1:9,0:9:2.74:12,3,0	./.
chr10	2268219	.	G	GCC	72.74	PASS	AB=0.930;AC=7;AF=0.140;AN=50;BaseQRankSum=4.735;DP=614;FS=0.000;HRun=0;HaplotypeScore=102.4520;InbreedingCoeff=0.4404;MQ=43.13;MQ0=87;MQRankSum=-3.403;QD=0.92;ReadPosRankSum=-1.229;VQSLOD=1.8365;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:16:2.83:21,3,0	0/0:11,0:10:27.05:0,27,403	./.	./.	0/0:32,0:26:63.64:0,64,920	0/0:35,0:31:72.18:0,72,1062	0/0:34,0:25:49.97:0,50,762	0/0:36,0:11:3.40:0,3,105	0/1:18,0:16:3.63:4,0,40	0/0:29,0:17:48.12:0,48,697	0/0:27,0:23:39.13:0,39,615	0/0:21,0:18:20.95:0,21,307	0/0:22,0:21:45:0,45,707	0/0:14,0:11:15.05:0,15,244	0/0:29,0:26:57.16:0,57,879	0/0:24,0:21:51.17:0,51,812	1/1:13,4:14:1.36:139,1,0	0/0:20,0:15:45.15:0,45,724	0/0:30,0:13:33.10:0,33,498	0/0:19,0:17:42.14:0,42,684	0/0:59,0:53:99:0,108,1633	0/0:19,0:12:36.10:0,36,538	0/0:15,0:14:30.10:0,30,489	0/0:22,0:20:46.88:0,47,778	0/0:27,0:24:52.89:0,53,802	0/1:13,0:11:7.85:8,0,121	0/1:8,0:8:0.02:0,0,0	./.
chr10	2268223	.	CTG	C	157.29	PASS	AB=0.912;AC=5;AF=0.104;AN=48;BaseQRankSum=6.134;DP=610;FS=1.067;HRun=0;HaplotypeScore=100.6920;InbreedingCoeff=0.2539;MQ=43.24;MQ0=87;MQRankSum=-4.882;QD=1.87;ReadPosRankSum=-0.204;VQSLOD=1.6198;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:17:1.88:0,2,15	0/0:12,0:11:27.08:0,27,471	./.	./.	0/0:33,0:27:46.14:0,46,976	0/0:34,0:30:69.07:0,69,1193	0/0:34,0:25:48.35:0,48,871	0/1:32,0:10:43.07:43,0,65	1/1:19,1:16:8.46:34,8,0	0/0:29,0:17:48.14:0,48,804	0/0:28,0:24:19.15:0,19,673	0/0:21,0:18:23.49:0,23,407	0/0:23,0:22:47.64:0,48,848	0/0:15,0:12:17.71:0,18,311	0/0:29,0:26:54.17:0,54,1016	0/0:23,0:20:50.74:0,51,899	0/1:18,0:15:17.02:17,0,38	0/0:20,0:15:45.15:0,45,860	0/0:30,0:13:39.13:0,39,693	0/0:20,0:18:45.10:0,45,825	0/0:55,0:49:96.17:0,96,1679	0/0:18,0:11:30.10:0,30,550	0/0:16,0:15:32.96:0,33,560	0/0:22,0:20:50.64:0,51,833	0/0:26,0:23:51.67:0,52,780	0/1:9,5:9:93.58:176,0,94	./.	./.
chr10	2268257	.	CTG	C	302.41	PASS	AB=0.878;AC=5;AF=0.100;AN=50;BaseQRankSum=6.267;DP=562;FS=10.150;HRun=0;HaplotypeScore=99.7560;InbreedingCoeff=0.2914;MQ=46.21;MQ0=52;MQRankSum=-6.895;QD=4.03;ReadPosRankSum=-2.958;VQSLOD=0.9820;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:25:10.02:0,10,189	0/0:13,0:12:30.09:0,30,544	./.	./.	0/0:30,0:29:62.69:0,63,1082	0/0:28,0:27:72.25:0,72,1379	0/0:28,0:25:54.17:0,54,993	0/1:20,5:17:84.61:202,0,85	1/1:8,13:16:12.51:163,13,0	0/0:24,0:14:42.14:0,42,770	0/0:27,0:23:54.19:0,54,1007	0/0:15,0:12:20.64:0,21,404	0/0:17,0:16:41.65:0,42,807	0/0:19,0:16:39.13:0,39,748	0/0:23,0:23:60.11:0,60,1038	0/0:21,0:20:57.15:0,57,988	0/1:10,2:10:26.13:43,0,26	0/0:21,0:16:48.16:0,48,906	0/0:26,0:19:54.14:0,54,890	0/0:17,0:16:45.14:0,45,806	0/0:49,0:46:99:0,99,1752	0/0:14,0:10:30.10:0,30,578	0/0:21,0:19:48.16:0,48,915	0/0:23,0:22:53.08:0,53,904	0/0:21,0:19:42.93:0,43,783	0/1:16,1:14:8.66:9,0,298	0/0:10,2:10:2.84:0,3,14	./.
chr10	2268259	.	GTC	G	178.34	PASS	AB=0.913;AC=7;AF=0.140;AN=50;BaseQRankSum=6.556;DP=565;FS=0.962;HRun=0;HaplotypeScore=99.7636;InbreedingCoeff=0.3601;MQ=46.25;MQ0=50;MQRankSum=-6.914;QD=2.10;ReadPosRankSum=-2.450;VQSLOD=1.7734;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:25:10.08:0,10,194	0/0:12,0:11:30.10:0,30,526	./.	./.	0/0:31,0:30:65.69:0,66,1092	0/0:29,0:28:78.24:0,78,1320	0/0:28,0:25:51.16:0,51,857	0/1:21,3:16:50.86:168,0,51	1/1:20,0:15:12.38:91,12,0	0/0:26,0:15:45.12:0,45,734	0/0:26,0:23:54.16:0,54,909	0/0:15,0:12:21.06:0,21,373	0/0:17,0:16:41.67:0,42,735	0/0:18,0:15:39.13:0,39,678	0/0:23,0:23:54.17:0,54,903	0/0:21,0:20:51.16:0,51,875	0/1:12,0:10:10.38:10,0,79	0/0:22,0:17:51.14:0,51,832	0/0:26,0:19:47.36:0,47,707	0/0:17,0:16:41.73:0,42,686	0/0:48,0:45:93.20:0,93,1601	0/0:15,0:11:30.10:0,30,526	0/0:20,0:19:48.16:0,48,850	0/0:24,0:23:56.05:0,56,873	0/0:21,0:19:42.93:0,43,727	0/1:14,3:14:23.58:24,0,197	1/1:11,1:10:0.47:1,0,0	./.
chr10	2268267	.	GTC	G	59.56	PASS	AB=0.900;AC=3;AF=0.058;AN=52;BaseQRankSum=5.008;DP=577;FS=6.919;HRun=0;HaplotypeScore=98.4558;InbreedingCoeff=0.5357;MQ=47.82;MQ0=46;MQRankSum=-4.996;QD=1.32;ReadPosRankSum=-2.505;VQSLOD=0.0553;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:24:10.05:0,10,205	0/0:13,0:12:33.11:0,33,578	./.	0/0:8,0:2:0.47:0,0,1	0/0:32,0:31:71.26:0,71,1196	0/0:29,0:28:75.20:0,75,1225	0/0:27,0:25:51.13:0,51,856	0/1:24,3:21:40.40:40,0,232	1/1:9,8:14:9.50:116,10,0	0/0:23,0:14:36.12:0,36,626	0/0:26,0:23:48.16:0,48,846	0/0:15,0:12:27.09:0,27,457	0/0:20,0:19:47.62:0,48,794	0/0:19,0:16:39.11:0,39,640	0/0:21,0:20:42.13:0,42,704	0/0:19,0:18:51.17:0,51,872	0/0:8,0:11:16.03:0,16,122	0/0:23,0:19:56.27:0,56,892	0/0:23,0:17:51.17:0,51,868	0/0:17,0:16:36.12:0,36,627	0/0:47,0:44:99:0,102,1609	0/0:14,0:12:33.06:0,33,545	0/0:20,0:19:54.18:0,54,930	0/0:26,0:25:50.19:0,50,831	0/0:22,0:20:41.67:0,42,710	0/0:16,1:15:31.23:0,31,397	0/0:13,0:14:5.08:0,5,57	./.
chr10	2268289	.	CTGTCTT	C	628.73	PASS	AB=0.958;AC=6;AF=0.111;AN=54;BaseQRankSum=7.374;DP=653;FS=3.482;HRun=0;HaplotypeScore=133.0710;InbreedingCoeff=0.1622;MQ=44.44;MQ0=71;MQRankSum=-8.611;QD=6.35;ReadPosRankSum=-1.136;VQSLOD=2.3533;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:16:8:0,8,238	0/0:15,0:14:36.12:0,36,896	0/0:28,0:2:3.01:0,3,33	0/0:43,0:5:11.99:0,12,140	0/0:33,0:31:80.42:0,80,2045	0/0:28,0:21:55.68:0,56,1652	0/0:30,0:24:63.17:0,63,1546	0/1:29,0:23:24.96:207,0,25	0/1:21,0:16:15.15:90,0,15	0/0:30,0:18:54.17:0,54,1452	0/0:27,0:24:51.85:0,52,1093	0/0:22,0:18:30:0,30,804	0/0:20,0:19:25.24:0,25,1244	0/0:17,0:15:42.11:0,42,1261	0/0:20,0:18:44.75:0,45,1130	0/0:19,0:16:45.15:0,45,1278	0/1:12,0:11:54.73:106,0,55	0/0:24,0:19:55.74:0,56,1342	0/0:24,0:17:48.12:0,48,1232	0/0:14,0:12:36.12:0,36,806	0/0:42,0:41:92.32:0,92,2575	0/0:17,0:15:41.27:0,41,838	0/0:24,0:22:66.23:0,66,1669	0/0:27,0:25:58.75:0,59,1496	0/0:21,0:19:51:0,51,1083	0/1:17,2:14:99:246,0,179	1/1:15,2:14:5.95:102,6,0	./.
chr10	2268295	.	T	TTC	792.66	PASS	AB=0.842;AC=8;AF=0.148;AN=54;BaseQRankSum=4.149;DP=671;FS=0.000;HRun=0;HaplotypeScore=109.6932;InbreedingCoeff=0.2911;MQ=44.42;MQ0=62;MQRankSum=-7.418;QD=6.24;ReadPosRankSum=-2.397;VQSLOD=2.8490;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:15,0:16:7.27:7,0,17	0/0:15,0:14:24.01:0,24,285	0/0:28,0:2:3.01:0,3,38	0/0:46,0:5:9.94:0,10,71	0/0:34,0:32:57.13:0,57,725	0/0:29,0:22:40.18:0,40,586	0/0:31,0:25:48.15:0,48,607	0/1:27,7:28:59.41:339,0,59	1/1:14,7:17:4.60:164,5,0	0/0:27,0:20:40.14:0,40,608	0/0:25,0:23:35.76:0,36,384	0/0:27,0:21:33.04:0,33,404	0/0:19,0:19:22.96:0,23,405	0/0:20,0:17:45.14:0,45,569	0/0:19,0:17:36.11:0,36,458	0/0:20,0:18:36.12:0,36,457	0/1:9,5:13:23.78:87,0,24	0/0:26,0:20:31.49:0,31,517	0/0:27,0:19:33.08:0,33,402	0/0:16,0:14:30.09:0,30,367	0/0:42,0:39:78.04:0,78,978	0/0:18,0:16:23.97:0,24,283	0/0:24,0:22:51.15:0,51,631	0/0:26,0:24:52.05:0,52,631	0/0:22,0:20:39.55:0,40,478	0/1:15,5:15:14.82:239,0,15	1/1:10,6:13:4.68:85,5,0	./.
chr10	2268315	.	G	GTC	433.68	PASS	AB=0.938;AC=7;AF=0.130;AN=54;BaseQRankSum=5.668;DP=657;FS=7.203;HRun=0;HaplotypeScore=126.9800;InbreedingCoeff=0.1936;MQ=43.89;MQ0=62;MQRankSum=-7.528;QD=2.78;ReadPosRankSum=-2.528;VQSLOD=1.4383;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:19:4.44:0,4,21	0/0:10,0:10:24.06:0,24,288	0/0:19,0:2:3.01:0,3,34	0/1:40,0:4:14.76:17,0,15	0/0:33,0:30:45.09:0,45,572	0/0:26,0:19:35.90:0,36,432	0/0:30,0:22:33.06:0,33,401	0/1:26,2:23:64.09:64,0,308	0/1:18,0:16:7.23:37,0,7	0/0:30,0:24:61.71:0,62,695	0/0:24,0:21:21.04:0,21,243	0/0:31,0:25:36.06:0,36,450	0/0:16,0:16:38.68:0,39,427	0/0:22,0:21:48.59:0,49,580	0/0:26,0:24:51.04:0,51,605	0/0:19,0:17:29.76:0,30,347	0/0:12,0:12:6.41:0,6,48	0/1:25,0:22:3.34:3,0,481	0/0:25,0:16:36.10:0,36,431	0/0:18,0:15:39.12:0,39,473	0/0:35,0:32:63.09:0,63,771	0/0:22,0:18:30.10:0,30,381	0/0:23,0:21:39.11:0,39,480	0/0:29,0:27:52.08:0,52,624	0/0:22,0:20:35.54:0,36,444	0/1:15,7:15:45.76:298,0,46	1/1:15,4:18:16.76:143,17,0	./.
chr10	2268341	.	GTCTC	G	988.78	PASS	AB=0.867;AC=14;AF=0.259;AN=54;BaseQRankSum=6.575;DP=648;FS=5.877;HRun=0;HaplotypeScore=139.8986;InbreedingCoeff=0.1998;MQ=45.50;MQ0=64;MQRankSum=-3.743;QD=3.99;ReadPosRankSum=-2.741;VQSLOD=1.7622;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:25,3:20:7.84:8,0,13	0/1:8,1:8:39.35:39,0,134	./.	0/0:8,0:2:1.25:0,1,3	0/1:31,1:30:30.59:31,0,161	0/0:27,0:22:52.89:0,53,906	0/0:26,0:20:17.77:0,18,224	1/1:22,0:17:3:39,3,0	0/0:12,0:19:3.51:0,4,13	0/0:35,0:30:57.26:0,57,1059	0/0:27,0:22:23.60:0,24,395	0/0:17,0:27:18.04:0,18,303	0/1:14,0:15:20.47:20,0,420	0/0:17,0:21:35.30:0,35,604	0/0:21,0:22:21:0,21,820	0/0:22,0:20:18.06:0,18,396	0/1:7,1:21:0.04:41,0,0	0/0:22,0:23:29:0,29,508	0/0:28,0:15:18.04:0,18,317	0/0:26,0:23:54.11:0,54,1044	0/1:25,1:24:33.55:34,0,189	0/0:25,0:23:29.97:0,30,476	0/0:20,0:18:28.89:0,29,457	0/1:30,1:28:6.68:7,0,725	0/0:22,0:20:35.39:0,35,576	0/1:17,15:24:46.80:496,0,47	1/1:10,15:21:27.98:418,28,0	1/1:5,0:1:2.37:8,2,0
chr10	2268956	.	CTTGTTGCAGT	C	1386.07	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.745;DP=542;FS=0.867;HRun=0;HaplotypeScore=161.2862;InbreedingCoeff=0.9844;MQ=86.73;MQ0=1;MQRankSum=-6.522;QD=27.18;ReadPosRankSum=0.163;VQSLOD=3.2446;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,29:36:39.12:1029,39,0	0/0:8,0:8:21.07:0,21,918	0/0:27,0:27:72.25:0,72,3152	0/0:27,0:26:28.96:0,29,2620	0/0:25,0:25:75.26:0,75,3679	0/0:14,0:14:36.10:0,36,1621	0/0:19,0:19:54.19:0,54,2352	0/0:32,0:32:84.29:0,84,4135	0/0:25,0:25:69.24:0,69,3313	0/0:21,0:21:54.19:0,54,2629	0/0:20,0:20:48.16:0,48,2197	0/0:17,0:17:51.18:0,51,2663	0/0:19,0:19:51.18:0,51,2405	0/0:13,0:13:36.12:0,36,1769	0/0:10,0:10:30.10:0,30,1257	0/0:16,0:16:48.16:0,48,2316	1/1:1,14:15:15.05:475,15,0	0/0:12,0:12:33.11:0,33,1729	0/0:23,0:23:63.14:0,63,2651	0/0:26,0:26:69.24:0,69,3509	0/0:24,0:24:72.25:0,72,3458	0/0:19,0:19:45.15:0,45,2216	0/0:12,0:12:33.58:0,34,1408	0/0:25,0:25:72.25:0,72,3209	0/0:15,0:15:42.14:0,42,2183	0/0:11,0:11:33.11:0,33,1487	0/0:25,0:25:72.25:0,72,3549	0/0:6,0:6:18.06:0,18,888
chr10	2269551	.	CT	C	203.44	PASS	AB=0.972;AC=5;AF=0.089;AN=56;BaseQRankSum=1.674;DP=411;FS=10.274;HRun=11;HaplotypeScore=55.8951;InbreedingCoeff=0.3954;MQ=68.02;MQ0=6;MQRankSum=0.462;QD=3.63;ReadPosRankSum=0.611;VQSLOD=-0.4578;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,1:33:13.14:0,13,51	0/0:6,0:6:15.02:0,15,151	0/0:27,0:11:17.77:0,18,142	0/1:16,0:11:4.77:5,0,86	0/0:14,1:15:11.45:0,11,327	0/0:9,0:9:18.03:0,18,183	0/1:9,0:9:3.62:4,0,158	0/0:37,0:36:62.44:0,62,390	0/0:11,0:11:28.80:0,29,164	0/0:16,0:16:38.93:0,39,398	0/0:13,0:13:28.88:0,29,290	0/0:7,0:7:15.04:0,15,159	0/1:10,1:11:3.73:4,0,168	0/0:14,0:14:30.04:0,30,308	0/0:14,0:14:26.97:0,27,265	0/0:9,0:10:20.89:0,21,206	1/1:6,14:19:35.95:296,36,0	0/0:13,0:12:30.08:0,30,319	0/0:21,0:21:41.93:0,42,423	0/0:17,0:17:33.08:0,33,352	0/0:7,0:7:15.03:0,15,153	0/0:10,0:10:12.03:0,12,128	0/0:15,0:15:23.01:0,23,210	0/0:8,0:8:18.05:0,18,192	0/0:11,0:11:30.07:0,30,315	0/0:11,0:11:25.21:0,25,174	0/0:22,0:22:37.50:0,37,205	0/0:6,0:6:17.25:0,17,92
chr10	2269562	.	T	TA	1837.81	PASS	AB=0.770;AC=10;AF=0.179;AN=56;BaseQRankSum=-7.495;DP=388;FS=0.000;HRun=2;HaplotypeScore=42.7895;InbreedingCoeff=0.7437;MQ=65.86;MQ0=9;MQRankSum=-0.767;QD=15.84;ReadPosRankSum=0.829;VQSLOD=3.2738;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:39.69:0,40,131	0/0:6,0:6:15.03:0,15,161	0/1:42,0:10:17.30:17,0,84	0/0:18,0:11:20.66:0,21,156	0/0:17,0:17:47.97:0,48,504	0/0:11,0:11:29.72:0,30,274	0/0:8,0:8:20.96:0,21,224	1/1:5,20:24:52.68:722,53,0	1/1:3,8:11:27.96:343,28,0	0/0:15,0:15:39.35:0,39,469	0/0:14,0:14:35.87:0,36,389	0/0:7,0:7:18.02:0,18,187	0/0:10,0:10:23.97:0,24,252	0/0:13,0:13:36.07:0,36,396	0/0:11,0:11:21.07:0,21,259	0/0:8,0:8:17.40:0,17,241	0/0:18,0:17:41.08:0,41,253	0/0:13,0:12:29.99:0,30,323	0/0:16,0:15:35.12:0,35,475	0/0:14,0:14:42.01:0,42,463	0/0:6,0:6:18:0,18,192	0/0:4,0:4:12.03:0,12,131	0/0:12,0:12:36.03:0,36,363	0/0:6,0:6:18.04:0,18,207	0/0:10,0:10:30:0,30,323	0/1:2,7:9:13.01:235,0,13	1/1:3,16:19:35.87:453,36,0	1/1:0,7:7:18.06:236,18,0
chr10	2269563	.	AAT	A	732.15	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.139;DP=385;FS=12.884;HRun=0;HaplotypeScore=52.6358;InbreedingCoeff=0.8640;MQ=64.64;MQ0=9;MQRankSum=-1.064;QD=22.88;ReadPosRankSum=1.011;VQSLOD=2.7354;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,31:32:54.10:827,54,0	0/0:5,0:5:15.04:0,15,265	0/0:46,0:10:25.21:0,25,317	0/0:20,0:10:8.59:0,9,186	0/0:17,0:17:48.15:0,48,889	0/0:11,0:11:30.81:0,31,513	0/0:8,0:8:18.53:0,19,360	0/0:25,0:24:69.17:0,69,798	0/0:11,0:11:30.08:0,30,363	0/0:15,0:15:45.09:0,45,798	0/0:14,0:14:35.89:0,36,705	0/0:7,0:7:18.05:0,18,315	0/0:10,0:10:24.07:0,24,423	0/0:13,0:13:36.11:0,36,687	0/0:10,0:10:24.07:0,24,449	0/0:8,0:8:24.08:0,24,479	0/0:17,0:16:42.14:0,42,568	0/0:13,0:12:33.04:0,33,543	0/0:16,0:15:45.15:0,45,856	0/0:14,0:14:42.13:0,42,795	0/0:6,0:6:18.06:0,18,353	0/0:4,0:4:12.03:0,12,206	0/0:12,0:12:36.11:0,36,677	0/0:6,0:6:18.05:0,18,328	0/0:10,0:10:30.09:0,30,528	0/0:9,0:9:27.07:0,27,320	0/0:18,0:18:38.98:0,39,493	0/0:8,0:8:21.02:0,21,226
chr10	2269644	.	C	CCCCT	1173.77	PASS	AB=0.938;AC=8;AF=0.182;AN=44;BaseQRankSum=-3.861;DP=198;FS=0.000;HRun=0;HaplotypeScore=18.4742;InbreedingCoeff=0.3784;MQ=34.68;MQ0=75;MQRankSum=-5.552;QD=20.24;ReadPosRankSum=-0.728;VQSLOD=2.7762;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:12:5.94:0,6,76	0/0:3,0:2:6.01:0,6,83	./.	./.	0/0:8,0:6:9.02:0,9,132	0/0:6,0:5:9.03:0,9,162	0/0:8,0:3:9.03:0,9,150	1/1:7,10:12:35.96:677,36,0	./.	0/0:6,0:3:9.03:0,9,141	0/1:8,0:8:7.94:8,0,103	0/0:5,0:1:3.01:0,3,50	0/0:7,0:6:9.02:0,9,168	0/0:5,0:4:6.02:0,6,106	./.	./.	0/0:7,0:2:6.02:0,6,111	0/0:3,0:2:6.02:0,6,112	0/0:9,0:5:12.04:0,12,223	0/0:3,0:3:9.03:0,9,168	0/0:15,0:5:6.02:0,6,112	0/0:7,0:3:6.02:0,6,112	0/0:2,0:2:6.02:0,6,112	0/0:6,0:2:3.01:0,3,56	./.	0/1:6,1:4:47.12:143,0,47	1/1:16,4:4:12.04:305,12,0	1/1:4,2:4:8.98:172,9,0
chr10	2271557	.	T	TC	443.42	PASS	AB=1.000;AC=16;AF=0.286;AN=56;BaseQRankSum=1.545;DP=461;FS=11.087;HRun=10;HaplotypeScore=60.6215;InbreedingCoeff=0.7078;MQ=77.36;MQ0=0;MQRankSum=-2.870;QD=4.22;ReadPosRankSum=-2.702;VQSLOD=-0.5078;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,6:13:3.01:31,3,0	0/0:12,0:12:11.86:0,12,93	0/0:24,0:24:19.16:0,19,344	0/0:13,0:12:19.71:0,20,142	1/1:5,5:10:12.03:128,12,0	0/0:10,0:10:14.94:0,15,120	0/0:23,0:23:10.95:0,11,245	0/1:15,0:15:0:0,0,0	1/1:5,0:5:0.47:1,0,0	0/0:16,0:17:22.98:0,23,178	0/0:18,0:19:40.96:0,41,325	0/0:18,0:19:37.89:0,38,295	0/1:20,0:23:3.57:4,0,236	0/0:19,0:19:23.85:0,24,193	0/0:34,0:34:22.86:0,23,343	0/0:24,0:25:46.82:0,47,390	1/1:15,5:20:3.73:215,4,0	0/0:8,0:8:17.95:0,18,148	0/0:20,0:20:23.90:0,24,195	0/0:24,0:25:20.82:0,21,168	0/0:13,1:14:3.98:0,4,239	0/0:15,0:16:10.46:0,10,75	0/0:10,0:10:17.94:0,18,146	0/0:26,1:28:32.95:0,33,465	0/0:19,0:19:29.95:0,30,246	1/1:9,0:9:3.88:27,4,0	1/1:6,0:6:14.96:119,15,0	1/1:4,0:4:8.99:77,9,0
chr10	2272068	.	GTC	G	1409.58	PASS	AB=0.906;AC=10;AF=0.179;AN=56;BaseQRankSum=9.896;DP=917;FS=6.436;HRun=0;HaplotypeScore=155.9845;InbreedingCoeff=-0.1342;MQ=61.59;MQ0=20;MQRankSum=-5.552;QD=3.15;ReadPosRankSum=0.893;VQSLOD=2.2559;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:40,3:44:38.41:186,0,38	0/0:19,0:18:16.33:0,16,618	0/1:83,1:35:4.01:4,0,51	0/1:106,1:33:12.29:12,0,125	0/0:30,0:29:74.13:0,74,1063	0/1:26,0:26:7.88:8,0,712	0/0:27,0:27:65.95:0,66,981	0/1:33,22:51:81.62:507,0,82	0/0:34,0:33:8.97:0,9,205	0/0:32,0:32:50.36:0,50,1213	0/0:15,0:15:36.11:0,36,529	0/0:26,0:26:68.08:0,68,978	0/0:26,0:26:24.40:0,24,773	0/0:28,0:28:65.33:0,65,879	0/0:28,0:28:56.83:0,57,810	0/0:30,0:30:63.03:0,63,948	0/1:10,7:17:2.12:82,0,2	0/0:17,0:17:42.10:0,42,637	0/0:19,0:19:41.85:0,42,564	0/0:23,0:23:54.01:0,54,729	0/0:34,0:34:61.96:0,62,889	0/0:33,0:33:80.92:0,81,1168	0/0:15,1:16:0.08:0,0,452	0/0:31,2:33:38.07:0,38,1022	0/1:27,0:27:4.72:5,0,792	0/1:34,4:36:99:310,0,207	0/1:34,2:35:99:405,0,117	0/1:11,2:12:25.99:26,0,72
chr10	2272074	.	C	CTG	2160.34	PASS	AB=0.900;AC=8;AF=0.143;AN=56;BaseQRankSum=12.192;DP=934;FS=6.414;HRun=0;HaplotypeScore=160.8539;InbreedingCoeff=0.4571;MQ=59.14;MQ0=22;MQRankSum=-7.169;QD=10.86;ReadPosRankSum=-0.788;VQSLOD=2.9357;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:44:17.62:0,18,215	0/0:18,0:17:54.10:0,54,751	0/0:74,0:28:23.98:0,24,306	0/0:111,0:34:33.45:0,33,357	0/0:32,0:31:81.22:0,81,1137	0/0:25,0:25:75.07:0,75,951	0/0:28,0:28:78.17:0,78,1099	0/1:53,0:49:99:405,0,99	0/1:36,0:35:99:406,0,111	0/0:34,0:34:79.89:0,80,1312	0/0:17,0:17:48.10:0,48,627	0/0:26,0:26:78.18:0,78,1079	0/0:27,0:27:77.91:0,78,1025	0/0:31,0:30:72.13:0,72,932	0/0:28,0:28:66.17:0,66,922	0/0:30,0:30:49.12:0,49,1028	1/1:17,0:17:10.67:58,11,0	0/0:16,0:16:45.11:0,45,634	0/0:21,0:19:54:0,54,650	0/0:22,0:22:60.15:0,60,827	0/0:33,0:33:84.11:0,84,1078	0/0:33,0:33:88.43:0,88,1205	0/0:24,0:23:54.04:0,54,653	0/0:30,0:30:81.16:0,81,1120	0/0:30,0:30:80.91:0,81,1006	0/1:30,9:37:99:669,0,143	0/1:30,11:40:1.81:561,0,2	1/1:10,3:12:9.16:202,9,0
chr10	2272086	.	GTC	G	88.61	PASS	AB=0.941;AC=9;AF=0.161;AN=56;BaseQRankSum=3.243;DP=878;FS=8.498;HRun=0;HaplotypeScore=156.7463;InbreedingCoeff=-0.1959;MQ=56.63;MQ0=22;MQRankSum=1.358;QD=0.40;ReadPosRankSum=-2.267;VQSLOD=1.6487;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:9.41:0,9,66	0/1:18,0:17:5.49:5,0,273	0/0:51,0:19:3.19:0,3,168	0/0:90,0:28:26.25:0,26,243	0/0:33,1:33:45.88:0,46,1039	0/1:25,2:27:55.16:55,0,570	0/0:29,1:30:18.85:0,19,716	0/0:44,0:40:37.52:0,38,245	0/0:29,0:28:5.98:0,6,182	0/0:34,0:34:43.65:0,44,665	0/1:19,0:18:28.47:28,0,380	0/1:30,0:30:39.34:39,0,769	0/1:20,3:23:27.87:28,0,688	0/0:31,0:30:57.63:0,58,812	0/1:18,8:26:31.52:32,0,466	0/0:27,0:27:59.98:0,60,811	0/0:19,0:19:6.85:0,7,33	0/0:14,0:14:36.12:0,36,552	0/1:20,0:18:0.81:1,0,352	0/1:21,2:23:2.25:2,0,362	0/0:29,0:29:54.13:0,54,766	0/1:35,1:36:23.31:23,0,726	0/0:24,3:26:54.37:0,54,770	0/0:32,0:32:66.57:0,67,897	0/0:29,0:30:59.67:0,60,846	0/0:38,0:36:42.56:0,43,354	0/0:42,0:41:2.05:0,2,304	0/0:13,0:12:14.75:0,15,99
chr10	2275736	.	CCCA	C	1326.90	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=3.107;DP=400;FS=13.368;HRun=0;HaplotypeScore=67.6335;InbreedingCoeff=0.8186;MQ=83.81;MQ0=0;MQRankSum=-1.950;QD=24.57;ReadPosRankSum=2.259;VQSLOD=2.4580;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:23.95:0,24,193	0/0:6,0:6:11.96:0,12,171	0/0:16,0:17:33.69:0,34,397	0/0:21,0:19:23.01:0,23,312	0/0:11,0:11:20.60:0,21,189	0/0:20,0:20:27.01:0,27,317	0/0:22,0:22:42.99:0,43,569	1/1:5,5:10:3.24:244,3,0	0/0:19,0:19:42.02:0,42,398	0/0:8,0:8:13:0,13,179	0/0:6,0:6:9.02:0,9,154	0/0:10,0:10:21.39:0,21,207	0/0:8,0:8:17.89:0,18,177	0/0:17,0:17:38.84:0,39,502	0/0:17,0:17:30.07:0,30,554	0/0:11,0:11:21.01:0,21,292	0/0:26,0:26:54.01:0,54,664	0/0:10,0:10:27:0,27,343	0/0:14,0:14:39.08:0,39,543	0/0:8,0:8:6.01:0,6,76	0/0:24,0:24:41.92:0,42,475	0/0:10,0:10:8.91:0,9,106	0/0:10,0:10:3:0,3,25	0/0:19,0:19:48.04:0,48,615	0/0:12,0:12:21.35:0,21,241	1/1:3,12:15:35.91:329,36,0	1/1:6,15:21:51.14:720,51,0	1/1:1,7:8:11.70:181,12,0
chr10	2275738	.	CA	C	575.96	PASS	AB=0.978;AC=12;AF=0.214;AN=56;BaseQRankSum=6.861;DP=355;FS=2.731;HRun=1;HaplotypeScore=51.5690;InbreedingCoeff=0.5364;MQ=87.47;MQ0=0;MQRankSum=-1.558;QD=5.70;ReadPosRankSum=2.160;VQSLOD=0.9068;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:17.93:0,18,144	0/1:4,0:4:12.71:13,0,90	0/0:17,0:17:26.23:0,26,297	0/1:19,2:19:1.54:2,0,181	0/0:10,0:10:11.66:0,12,89	0/0:18,0:18:26.74:0,27,212	0/0:17,0:17:13.95:0,14,240	1/1:8,0:8:21.30:134,21,0	0/1:17,0:17:10.29:10,0,78	0/0:7,0:7:9.92:0,10,124	0/0:5,0:5:9.01:0,9,105	0/0:9,1:10:11.72:0,12,107	0/0:10,0:10:17.68:0,18,149	0/0:14,0:14:23.80:0,24,259	0/0:13,0:13:27.03:0,27,326	0/0:11,0:11:23.98:0,24,240	0/0:23,0:23:35.59:0,36,362	0/0:9,0:9:10.49:0,10,162	0/0:16,0:16:37.78:0,38,385	0/0:5,0:5:8.92:0,9,69	0/0:20,0:20:30.11:0,30,299	0/0:9,0:9:12.40:0,12,108	0/0:7,0:7:2.91:0,3,25	0/0:18,0:18:14.75:0,15,279	0/1:11,0:11:9:9,0,131	1/1:13,1:14:35.49:256,35,0	1/1:19,0:19:48.88:257,49,0	1/1:7,0:7:11.50:60,12,0
chr10	2277209	.	CAG	C	1082.34	PASS	AB=1.000;AC=12;AF=0.214;AN=56;BaseQRankSum=3.247;DP=582;FS=8.489;HRun=0;HaplotypeScore=87.9004;InbreedingCoeff=0.7903;MQ=63.05;MQ0=2;MQRankSum=-2.049;QD=13.36;ReadPosRankSum=-0.833;VQSLOD=2.6076;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:20.76:0,21,303	0/1:4,0:4:0.79:1,0,26	0/0:35,0:19:15.08:0,15,347	0/0:38,0:26:62.01:0,62,596	0/0:21,0:21:42.93:0,43,627	0/0:26,0:26:54.16:0,54,391	0/0:32,0:32:55.94:0,56,374	1/1:17,0:16:44.95:385,45,0	1/1:8,0:8:6.79:51,7,0	0/0:26,0:26:41.37:0,41,676	0/0:19,0:19:48.61:0,49,768	0/0:24,0:24:32.90:0,33,557	0/1:8,0:8:3.44:3,0,157	0/0:26,0:26:54.54:0,55,652	0/0:13,0:13:26.59:0,27,332	0/0:17,0:17:30.16:0,30,424	0/0:30,0:29:55.91:0,56,538	0/0:18,0:17:5.20:0,5,188	0/0:24,0:22:18.26:0,18,508	0/0:13,0:13:32.98:0,33,361	0/0:41,0:41:39:0,39,831	0/0:17,0:17:39.33:0,39,580	0/0:15,0:15:41.25:0,41,472	0/0:21,0:21:22:0,22,530	0/0:19,0:19:37.49:0,37,542	1/1:16,0:16:6.98:222,7,0	1/1:8,1:9:20.96:186,21,0	1/1:15,4:19:47.77:399,48,0
chr10	2277211	.	GACAC	G	752.98	PASS	AB=0.868;AC=13;AF=0.241;AN=54;BaseQRankSum=2.345;DP=602;FS=1.481;HRun=0;HaplotypeScore=109.8476;InbreedingCoeff=0.3702;MQ=59.55;MQ0=3;MQRankSum=0.943;QD=4.62;ReadPosRankSum=1.565;VQSLOD=2.3624;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:29:12:0,12,125	0/1:2,1:4:6.44:41,0,6	0/0:31,0:15:3.01:0,3,41	./.	0/0:20,0:22:26.81:0,27,448	1/1:18,7:26:11.88:146,12,0	1/1:14,21:36:29.76:381,30,0	0/0:19,0:18:5.90:0,6,37	0/0:7,0:7:3:0,3,25	0/0:26,0:27:45.09:0,45,626	0/0:18,0:19:35.86:0,36,746	0/0:21,0:24:29.54:0,30,484	0/0:9,0:10:11.76:0,12,156	0/0:27,0:27:26.74:0,27,482	0/0:12,0:14:4.31:0,4,279	0/0:15,0:17:14.52:0,15,215	0/0:31,0:30:36.31:0,36,333	0/1:14,3:18:56.59:161,0,57	0/0:24,0:23:21.77:0,22,196	0/0:14,0:14:15.02:0,15,245	0/0:38,0:41:52.36:0,52,836	0/1:16,0:17:18.60:19,0,539	0/1:14,1:15:19.96:20,0,365	0/0:22,0:23:24.78:0,25,560	0/0:18,0:20:29.43:0,29,506	0/1:16,0:16:14.03:14,0,71	1/1:11,0:11:2.92:19,3,0	1/1:19,0:19:13.64:113,14,0
chr10	2277249	.	C	CGCGCGCGCGT	866.56	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=4.042;DP=557;FS=5.472;HRun=0;HaplotypeScore=172.6437;InbreedingCoeff=0.6487;MQ=51.84;MQ0=14;MQRankSum=-4.539;QD=7.16;ReadPosRankSum=-2.043;VQSLOD=2.0504;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:33:51.57:0,52,1138	0/0:6,0:6:15.05:0,15,315	0/0:9,0:6:13.60:0,14,259	0/0:10,0:5:8.78:0,9,251	0/0:17,0:17:36.11:0,36,855	0/0:21,0:21:30.75:0,31,892	0/0:36,0:36:17.28:0,17,1316	1/1:13,0:10:9.02:90,9,0	0/1:8,0:7:0.93:1,0,78	0/0:29,0:29:84.36:0,84,2201	0/0:15,0:14:42.14:0,42,1218	0/0:23,0:23:55.04:0,55,1544	0/0:11,0:11:24.05:0,24,650	0/0:28,0:28:72.19:0,72,2233	0/0:16,0:16:36.11:0,36,1125	0/0:8,0:7:18.04:0,18,385	0/1:36,0:34:7.55:8,0,547	0/0:29,0:28:66.55:0,67,1732	0/0:21,0:17:39.44:0,39,764	0/0:8,0:8:18.05:0,18,513	0/0:58,0:56:99:0,120,3616	0/1:14,0:14:12.32:12,0,1068	0/0:14,0:14:36.56:0,37,933	0/0:26,0:26:63.13:0,63,1764	0/0:17,0:17:42.13:0,42,1304	1/1:4,5:15:17.53:318,18,0	1/1:10,0:11:5.53:137,6,0	1/1:23,0:22:30.59:456,31,0
chr10	2277252	.	A	ACGCGCGCGCGCGCGCG	2289.74	PASS	AB=0.976;AC=10;AF=0.179;AN=56;BaseQRankSum=4.910;DP=559;FS=2.600;HRun=0;HaplotypeScore=230.1175;InbreedingCoeff=0.6894;MQ=53.99;MQ0=14;MQRankSum=-8.490;QD=15.90;ReadPosRankSum=-3.692;VQSLOD=2.2294;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:34,0:34:13.43:13,0,920	0/0:5,0:5:15.05:0,15,421	0/0:9,0:6:12.04:0,12,371	0/0:11,0:7:11.69:0,12,346	0/0:15,0:15:21.05:0,21,670	0/0:22,0:22:35.15:0,35,1292	0/0:36,0:36:61.09:0,61,1920	1/1:15,0:12:22.14:129,22,0	0/0:5,0:10:2.67:0,3,22	0/0:28,0:28:65.95:0,66,2313	0/0:16,0:15:33.10:0,33,1175	0/0:21,0:21:49.11:0,49,1844	0/0:11,0:11:24.08:0,24,855	0/0:28,0:28:76.40:0,76,2754	0/0:16,0:16:39.12:0,39,1528	0/0:8,0:7:17.93:0,18,354	0/1:36,0:37:55.10:444,0,55	0/0:28,0:28:66.07:0,66,2328	0/0:23,0:19:28.40:0,28,793	0/0:8,0:8:15.04:0,15,538	0/0:53,0:51:99:0,112,4421	0/0:13,0:13:33.10:0,33,1247	0/0:12,0:12:27.07:0,27,968	0/0:24,0:24:54.13:0,54,1861	0/0:16,0:16:42.11:0,42,1412	1/1:17,0:16:42.08:1089,42,0	1/1:13,0:13:9.50:157,10,0	1/1:12,2:24:22.28:620,22,0
chr10	2278917	.	CAA	C	738.70	PASS	AB=0.741;AC=8;AF=0.143;AN=56;BaseQRankSum=0.559;DP=442;FS=0.629;HRun=15;HaplotypeScore=59.4297;InbreedingCoeff=0.6164;MQ=58.53;MQ0=30;MQRankSum=2.212;QD=8.79;ReadPosRankSum=1.956;VQSLOD=0.9391;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:32:50.95:0,51,498	0/0:3,0:3:5.51:0,6,50	0/0:20,0:8:20.61:0,21,194	0/0:16,0:7:0.18:0,0,33	0/0:18,0:18:38.96:0,39,425	0/0:13,0:12:29.01:0,29,306	0/0:17,0:17:42.11:0,42,534	1/1:12,10:21:9.21:199,9,0	0/0:7,0:9:17.99:0,18,188	0/0:16,0:17:38.57:0,39,437	0/0:22,1:22:30.67:0,31,657	0/0:15,0:16:27.09:0,27,360	0/0:8,0:8:18.06:0,18,233	0/0:8,0:9:18.05:0,18,229	0/0:11,0:11:17.55:0,18,212	0/0:12,0:11:27.07:0,27,337	0/0:10,0:20:30.02:0,30,273	0/0:9,0:11:30.06:0,30,371	0/0:20,0:18:42.10:0,42,514	0/0:19,0:19:54.01:0,54,644	0/0:7,0:4:12.04:0,12,162	0/0:9,0:11:26:0,26,265	0/0:13,0:13:27.03:0,27,324	0/1:12,2:11:25.81:26,0,240	0/0:16,0:18:41.61:0,42,510	0/1:6,10:17:6.76:227,0,7	1/1:4,7:13:11.19:165,11,0	1/1:3,10:12:26.60:267,27,0
chr10	2279856	.	CTCTGGCCT	C	1268.81	PASS	AB=0.758;AC=5;AF=0.093;AN=54;BaseQRankSum=5.310;DP=609;FS=3.761;HRun=0;HaplotypeScore=146.5157;InbreedingCoeff=0.6631;MQ=59.97;MQ0=2;MQRankSum=-2.512;QD=22.66;ReadPosRankSum=2.018;VQSLOD=3.0708;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:90.23:0,90,2488	0/0:10,0:10:18.04:0,18,443	./.	0/0:15,0:11:3:0,3,26	0/0:20,0:20:33.08:0,33,984	0/0:22,0:22:51.11:0,51,1356	0/0:24,0:24:24.04:0,24,508	0/0:23,0:23:0:0,0,0	0/0:24,0:24:24.07:0,24,837	0/0:28,0:28:54.16:0,54,1510	0/0:19,0:19:27.07:0,27,839	0/0:11,0:22:15.01:0,15,260	0/0:21,0:21:33.07:0,33,928	0/0:23,0:23:42.10:0,42,1354	0/0:19,0:19:36.08:0,36,947	0/0:20,0:20:42.07:0,42,1283	0/0:28,0:28:33.91:0,34,635	0/0:18,0:18:42.06:0,42,1089	0/0:10,0:10:6.02:0,6,178	0/0:19,0:19:27.04:0,27,710	0/0:38,0:38:81.15:0,81,1888	0/0:29,0:29:48.13:0,48,1428	0/0:21,0:21:30.08:0,30,919	0/0:28,0:28:54.14:0,54,1671	0/0:17,0:17:24.04:0,24,559	0/1:17,8:25:99:454,0,336	1/1:17,5:22:39.12:752,39,0	1/1:8,1:9:17.94:189,18,0
chr10	2279945	.	A	AC	3208.41	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-9.807;DP=595;FS=0.000;HRun=4;HaplotypeScore=60.8161;InbreedingCoeff=0.9975;MQ=77.60;MQ0=0;MQRankSum=-2.556;QD=34.50;ReadPosRankSum=0.856;VQSLOD=4.0832;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,99,1087	0/0:12,0:12:30.07:0,30,330	0/0:26,0:27:68.93:0,69,761	0/0:24,0:24:52.66:0,53,571	0/0:19,0:19:57.12:0,57,630	0/0:19,0:19:54.14:0,54,602	0/0:23,0:23:60.17:0,60,680	1/1:3,21:24:60.19:801,60,0	1/1:1,19:20:57.19:780,57,0	0/0:13,0:13:36.10:0,36,408	0/0:23,0:23:66.18:0,66,738	0/0:13,0:13:36.10:0,36,408	0/0:24,0:24:69.20:0,69,782	0/0:24,0:24:69.20:0,69,783	0/0:17,0:17:48.14:0,48,545	0/0:16,0:16:45.13:0,45,511	0/0:19,0:19:57.16:0,57,646	0/0:25,0:25:66.15:0,66,734	0/0:12,0:12:30.08:0,30,336	0/0:22,0:22:57.14:0,57,636	0/0:42,0:42:99:0,110,1217	0/0:27,0:27:75.21:0,75,851	0/0:15,0:15:45.11:0,45,501	0/0:27,0:27:72.21:0,72,817	0/0:22,0:22:63.18:0,63,714	1/1:1,16:17:17.49:623,17,0	1/1:1,17:18:51.17:687,51,0	1/1:1,13:14:36.12:492,36,0
chr10	2280014	.	CTA	C	1456.59	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.784;DP=648;FS=3.070;HRun=0;HaplotypeScore=85.8521;InbreedingCoeff=0.9997;MQ=76.09;MQ0=1;MQRankSum=-5.481;QD=34.68;ReadPosRankSum=-0.323;VQSLOD=5.6923;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,20:23:57.13:798,57,0	0/0:12,0:12:30.10:0,30,579	0/0:20,0:19:57.19:0,57,1041	0/0:28,0:28:72.02:0,72,1321	0/0:36,0:36:99:0,105,2027	0/0:20,0:20:60.19:0,60,1115	0/0:18,0:18:54.17:0,54,1010	0/0:21,0:21:63.21:0,63,1174	0/0:19,0:18:54.19:0,54,1043	0/0:29,0:29:87.30:0,87,1681	0/0:25,0:25:72.22:0,72,1356	0/0:15,0:15:45.15:0,45,849	0/0:25,0:25:72.23:0,72,1357	0/0:30,0:30:90.31:0,90,1724	0/0:22,0:22:66.23:0,66,1266	0/0:18,0:18:54.16:0,54,965	1/1:0,19:19:51.17:781,51,0	0/0:23,0:23:66.19:0,66,1203	0/0:19,0:19:57.16:0,57,1050	0/0:27,0:27:78.27:0,78,1505	0/0:43,0:43:99:0,126,2291	0/0:17,0:17:51.17:0,51,985	0/0:18,0:18:54.17:0,54,1009	0/0:20,0:20:57.20:0,57,1089	0/0:24,0:24:69.21:0,69,1255	0/0:29,0:29:87.30:0,87,1675	0/0:36,0:36:99:0,99,1899	0/0:12,0:12:36.12:0,36,695
chr10	2280025	.	C	CTTTAA	1393.76	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.933;DP=639;FS=4.656;HRun=0;HaplotypeScore=124.7754;InbreedingCoeff=0.9993;MQ=71.91;MQ0=2;MQRankSum=-6.417;QD=66.37;ReadPosRankSum=-2.213;VQSLOD=4.4112;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:6,15:21:54.15:1489,54,0	0/0:12,0:12:30.10:0,30,666	0/0:24,0:20:52.98:0,53,1040	0/0:23,0:23:53.12:0,53,1110	0/0:37,0:37:99:0,108,2366	0/0:20,0:20:60.21:0,60,1315	0/0:19,0:19:54.19:0,54,1202	0/0:25,0:25:75.24:0,75,1548	0/0:21,0:20:60.18:0,60,1283	0/0:30,0:30:87.30:0,87,1918	0/0:25,0:25:72.20:0,72,1548	0/0:15,0:15:42.13:0,42,884	0/0:25,0:25:72.25:0,72,1550	0/0:30,0:30:90.30:0,90,1947	0/0:23,0:23:69.21:0,69,1454	0/0:16,0:16:48.16:0,48,1045	0/0:20,0:20:57.19:0,57,1227	0/0:22,0:22:66.19:0,66,1415	0/0:16,0:16:48.16:0,48,1068	0/0:30,0:30:90.28:0,90,1869	0/0:35,0:35:99:0,102,2254	0/0:16,0:16:48.16:0,48,1049	0/0:16,0:16:48.16:0,48,1039	0/0:19,0:19:57.18:0,57,1193	0/0:20,0:20:57.20:0,57,1255	0/0:29,0:29:84.29:0,84,1871	0/0:38,0:38:99:0,111,2408	0/0:12,0:12:36.12:0,36,795
chr10	2282466	.	C	CT	2598.32	PASS	AB=0.871;AC=18;AF=0.321;AN=56;BaseQRankSum=-3.649;DP=497;FS=5.765;HRun=10;HaplotypeScore=58.5646;InbreedingCoeff=0.6396;MQ=73.48;MQ0=1;MQRankSum=-2.387;QD=12.99;ReadPosRankSum=-1.810;VQSLOD=2.9624;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:18:17.45:150,17,0	0/0:9,0:9:23.94:0,24,193	0/0:24,0:19:19.86:0,20,196	0/0:19,0:15:19.60:0,20,138	0/0:24,1:25:39.91:0,40,531	0/0:24,0:24:50.93:0,51,419	0/1:9,1:10:5.03:5,0,170	1/1:6,20:28:62.78:600,63,0	1/1:1,12:13:27.07:288,27,0	0/0:16,0:16:38.95:0,39,320	0/0:18,0:19:49.98:0,50,400	0/0:13,0:13:26.96:0,27,222	0/0:20,0:20:32.91:0,33,271	0/0:13,0:13:7.21:0,7,264	0/0:19,1:20:18.94:0,19,359	0/1:7,2:9:40.06:40,0,117	1/1:8,0:28:45.64:234,46,0	0/0:21,0:21:2.30:0,2,299	0/1:17,3:20:48.05:48,0,272	0/0:21,0:21:59.90:0,60,489	0/0:7,0:7:8.98:0,9,74	0/1:7,1:8:7.96:8,0,148	0/0:15,1:16:9.65:0,10,288	0/0:9,0:9:23.97:0,24,197	0/0:20,0:20:53.90:0,54,439	1/1:2,13:16:38.92:390,39,0	1/1:6,25:31:25.90:676,26,0	1/1:2,15:19:17.16:356,17,0
chr10	2283351	.	CAG	C	522.47	PASS	AB=0.961;AC=27;AF=0.563;AN=48;BaseQRankSum=0.867;DP=549;FS=6.036;HRun=0;HaplotypeScore=60.2617;InbreedingCoeff=0.0967;MQ=25.19;MQ0=239;MQRankSum=-0.499;QD=1.25;ReadPosRankSum=1.433;VQSLOD=0.6342;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:33,0:17:3.87:24,4,0	0/0:5,0:4:0:0,0,0	./.	./.	0/0:7,3:6:2.99:0,3,23	0/1:26,0:14:23.08:52,0,23	0/0:32,0:10:1.66:0,2,6	./.	./.	0/1:19,0:8:12.91:13,0,79	1/1:14,0:6:2.99:24,3,0	0/0:19,0:10:0.35:0,0,25	0/0:16,0:9:1.13:0,1,47	1/1:29,0:13:11.59:70,12,0	0/0:22,0:11:8.74:0,9,56	1/1:23,0:9:5.91:39,6,0	0/1:25,15:21:2.40:2,0,11	0/1:24,0:10:14.28:14,0,60	0/1:15,0:9:31.44:34,0,31	0/0:15,0:6:2.84:0,3,9	1/1:56,0:21:11.73:76,12,0	0/1:23,0:12:9.81:10,0,20	1/1:17,0:7:2.84:14,3,0	0/1:27,0:16:5.05:27,0,5	1/1:16,0:10:8.52:45,9,0	1/1:28,0:12:17.65:164,18,0	1/1:13,0:8:5.77:36,6,0	1/1:14,0:4:2.92:17,3,0
chr10	2284959	.	TA	T	4494.45	PASS	AB=0.527;AC=9;AF=0.161;AN=56;BaseQRankSum=10.983;DP=673;FS=0.726;HRun=5;HaplotypeScore=67.2623;InbreedingCoeff=0.8838;MQ=75.76;MQ0=2;MQRankSum=-2.201;QD=30.78;ReadPosRankSum=-2.797;VQSLOD=4.2898;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:63.17:0,63,832	0/0:10,0:10:30.10:0,30,410	0/0:22,0:21:59.53:0,60,739	0/0:20,0:19:44.37:0,44,544	0/0:44,0:44:99:0,123,1646	0/0:28,0:28:72.24:0,72,985	0/0:15,0:15:42.12:0,42,557	1/1:2,36:38:99:1215,108,0	1/1:1,19:20:51.15:579,51,0	0/0:31,0:31:84.27:0,84,1123	0/0:29,0:29:72.24:0,72,984	0/0:18,0:18:54.15:0,54,706	0/0:34,0:33:90.30:0,90,1231	0/0:24,0:24:69.19:0,69,923	0/0:21,0:21:60.20:0,60,821	0/0:15,0:15:45.14:0,45,600	0/0:16,0:16:45.11:0,45,594	0/0:15,0:14:42.10:0,42,553	0/0:25,0:25:63.18:0,63,829	0/0:41,0:41:99:0,111,1518	0/0:11,0:11:30.10:0,30,407	0/0:22,0:22:66.21:0,66,887	0/0:23,0:23:60.16:0,60,800	0/0:15,0:15:42.13:0,42,561	0/0:24,0:24:69.23:0,69,943	0/1:4,35:39:8.84:1067,0,9	1/1:0,33:33:96.27:1089,96,0	1/1:0,16:16:48.14:545,48,0
chr10	2285336	.	GT	G	1553.78	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=7.212;DP=517;FS=2.011;HRun=12;HaplotypeScore=55.9032;InbreedingCoeff=0.9079;MQ=63.46;MQ0=2;MQRankSum=2.100;QD=14.94;ReadPosRankSum=-0.155;VQSLOD=4.2382;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:6,1:18:17.27:0,17,203	0/0:10,0:11:26.85:0,27,239	0/0:13,0:11:14.87:0,15,118	0/0:13,1:14:1.15:0,1,76	0/0:27,0:28:74.97:0,75,739	0/0:13,1:14:6.82:0,7,251	0/0:13,1:15:18.66:0,19,345	1/1:6,21:27:56.72:438,57,0	1/1:2,11:13:29.88:232,30,0	0/0:29,0:29:74.95:0,75,721	0/0:18,0:21:15.69:0,16,324	0/0:16,0:16:42.08:0,42,425	0/0:13,0:16:31.23:0,31,365	0/0:18,0:18:45.02:0,45,439	0/0:13,0:13:36.07:0,36,364	0/0:13,0:13:30.06:0,30,305	0/0:27,0:29:80.83:0,81,789	0/0:19,0:19:54.11:0,54,548	0/0:9,0:9:15.03:0,15,152	0/0:25,1:28:45.55:0,46,599	0/0:14,0:14:27.05:0,27,274	0/0:26,0:25:66.59:0,67,661	0/0:18,0:18:48.10:0,48,487	0/0:15,0:15:41.86:0,42,390	0/0:14,1:16:12.68:0,13,296	1/1:4,20:25:61.80:470,62,0	1/1:5,21:27:58.79:447,59,0	1/1:6,6:12:17.93:139,18,0
chr10	2288437	.	G	GA	924.19	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-8.267;DP=563;FS=0.734;HRun=6;HaplotypeScore=56.3427;InbreedingCoeff=0.9663;MQ=61.88;MQ0=2;MQRankSum=3.506;QD=30.81;ReadPosRankSum=2.831;VQSLOD=4.2063;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,126,1284	0/0:6,0:6:15.03:0,15,153	0/0:20,0:16:45.08:0,45,451	0/0:28,0:26:57.04:0,57,565	0/0:24,0:24:63.01:0,63,642	0/0:19,0:19:48.11:0,48,490	0/0:30,0:30:90.20:0,90,918	0/0:27,0:27:63.13:0,63,637	0/0:13,0:13:33.06:0,33,330	0/0:25,0:25:57.12:0,57,577	0/0:11,0:11:24.05:0,24,245	0/0:21,0:21:54.11:0,54,544	0/0:19,0:19:54.12:0,54,551	0/0:19,0:19:54.12:0,54,551	0/0:20,0:20:57.11:0,57,573	0/0:11,0:11:30.07:0,30,306	1/1:3,27:30:81.26:1019,81,0	0/0:24,0:24:69.09:0,69,685	0/0:19,0:18:45.10:0,45,459	0/0:16,0:16:42.08:0,42,422	0/0:30,0:30:81.16:0,81,819	0/0:16,0:16:39.07:0,39,391	0/0:14,0:14:33.06:0,33,330	0/0:19,0:19:51.11:0,51,520	0/0:18,0:18:45.10:0,45,458	0/0:20,0:20:53.57:0,54,550	0/0:15,0:15:39.08:0,39,398	0/0:5,0:5:15.03:0,15,153
chr10	2291671	.	T	TA	2961.74	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=1.887;DP=522;FS=8.652;HRun=1;HaplotypeScore=71.2180;InbreedingCoeff=0.9602;MQ=70.94;MQ0=0;MQRankSum=-1.375;QD=28.75;ReadPosRankSum=-4.763;VQSLOD=1.3756;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:75.20:0,75,924	0/0:9,0:9:27.09:0,27,346	0/0:20,0:19:54.09:0,54,674	0/0:19,0:18:29.35:0,29,452	0/0:16,0:16:42.13:0,42,533	0/0:21,0:21:60.19:0,60,755	0/0:19,0:19:57.13:0,57,686	1/1:2,14:15:44.68:561,45,0	1/1:3,28:31:26.95:770,27,0	0/0:20,0:20:51.16:0,51,644	0/0:14,0:14:39.13:0,39,499	0/0:9,0:9:17.88:0,18,261	0/0:19,0:19:56.87:0,57,684	0/0:15,0:15:45.13:0,45,559	0/0:15,0:15:37.96:0,38,510	0/0:16,1:17:3.41:0,3,526	0/0:25,0:25:72.10:0,72,827	0/0:14,0:14:42.11:0,42,525	0/0:16,0:16:42.11:0,42,505	0/0:19,0:19:47.86:0,48,580	0/0:27,0:27:75.16:0,75,942	0/0:15,0:15:39.13:0,39,504	0/0:16,0:16:42.12:0,42,519	0/0:21,0:21:57.14:0,57,692	0/0:24,0:24:63.09:0,63,781	1/1:4,17:21:48.62:671,49,0	1/1:5,14:19:48.06:623,48,0	1/1:4,11:16:40.86:511,41,0
chr10	2300191	.	T	TAAA	2292.04	PASS	AB=0.667;AC=11;AF=0.196;AN=56;BaseQRankSum=1.677;DP=296;FS=0.825;HRun=10;HaplotypeScore=45.3390;InbreedingCoeff=0.7559;MQ=64.16;MQ0=2;MQRankSum=-2.634;QD=27.61;ReadPosRankSum=-1.916;VQSLOD=1.2102;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:51.85:0,52,587	0/0:2,0:2:6.02:0,6,73	0/0:8,0:7:12:0,12,142	0/0:6,0:5:6.01:0,6,73	0/0:12,0:11:33.10:0,33,401	0/0:7,0:7:12.01:0,12,146	0/0:3,0:3:6.02:0,6,73	1/1:3,9:12:27.06:482,27,0	1/1:0,3:4:9.01:138,9,0	0/0:14,0:15:39.01:0,39,444	0/0:17,0:17:45.61:0,46,548	0/0:3,0:3:9.03:0,9,109	0/0:9,0:9:24.07:0,24,292	0/0:7,0:7:12:0,12,146	0/0:7,0:7:21.05:0,21,244	0/0:6,0:5:9.01:0,9,109	1/1:3,0:14:8.72:20,9,0	0/0:11,0:10:24.07:0,24,290	0/0:12,0:12:25.39:0,25,325	0/0:9,0:10:27:0,27,310	0/0:9,0:10:27.02:0,27,310	0/0:9,0:9:24.04:0,24,289	0/0:9,0:9:20.21:0,20,228	0/0:12,0:12:27.01:0,27,297	0/0:12,0:12:33.07:0,33,401	0/1:12,11:24:24.86:678,0,25	1/1:8,11:18:36.12:682,36,0	1/1:0,10:10:24.08:461,24,0
chr10	2300303	.	CA	C	976.81	PASS	AB=0.909;AC=15;AF=0.268;AN=56;BaseQRankSum=5.784;DP=437;FS=10.204;HRun=13;HaplotypeScore=54.8249;InbreedingCoeff=0.4811;MQ=78.02;MQ0=0;MQRankSum=-2.675;QD=5.65;ReadPosRankSum=-0.450;VQSLOD=0.9102;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,3:32:32.43:0,32,601	0/0:8,0:9:20.87:0,21,189	0/1:19,2:19:32.11:32,0,37	0/0:8,0:7:14.81:0,15,113	0/0:14,0:17:26.81:0,27,227	0/0:15,1:19:22.66:0,23,337	0/0:12,1:13:2.14:0,2,183	1/1:10,15:26:39.79:274,40,0	1/1:2,0:15:22.40:65,22,0	0/0:24,3:28:0.16:0,0,460	0/0:8,0:8:15.02:0,15,146	0/0:12,0:12:26.98:0,27,247	0/1:19,3:22:11.65:12,0,364	0/0:8,0:8:14.99:0,15,137	0/0:12,0:12:21.03:0,21,200	0/1:13,1:14:13.58:14,0,203	0/0:2,0:19:37.09:0,37,200	0/0:13,1:14:11.15:0,11,270	0/0:21,0:22:29.88:0,30,277	0/1:10,1:11:2.64:3,0,130	0/0:12,1:14:10.97:0,11,250	0/1:7,1:9:7.05:7,0,87	0/0:11,0:12:20.87:0,21,189	0/0:10,1:11:7.35:0,7,218	0/0:6,0:6:6.01:0,6,58	1/1:7,15:23:49.69:354,50,0	1/1:6,13:19:35.76:263,36,0	1/1:6,6:12:17.84:131,18,0
chr10	2301184	.	AG	A	489.49	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.091;DP=523;FS=5.198;HRun=2;HaplotypeScore=55.3479;InbreedingCoeff=0.9830;MQ=83.66;MQ0=0;MQRankSum=-1.400;QD=27.19;ReadPosRankSum=0.802;VQSLOD=3.1495;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,138,2048	0/0:13,0:13:36.09:0,36,500	0/0:18,0:18:51.16:0,51,707	0/0:20,0:20:53.25:0,53,697	0/0:15,0:15:42.14:0,42,629	0/0:10,0:10:30.09:0,30,430	0/0:19,0:19:57.19:0,57,854	0/0:18,0:18:48.16:0,48,720	1/1:1,17:18:45.15:584,45,0	0/0:18,0:18:51.17:0,51,764	0/0:22,0:22:66.22:0,66,987	0/0:5,0:5:15.05:0,15,225	0/0:14,0:14:42.14:0,42,628	0/0:13,0:13:39.13:0,39,585	0/0:11,0:11:33.11:0,33,495	0/0:18,0:18:54.18:0,54,809	0/0:29,0:29:87.29:0,87,1304	0/0:22,0:22:63.19:0,63,916	0/0:18,0:18:48.13:0,48,659	0/0:21,0:21:60.20:0,60,897	0/0:26,0:26:78.26:0,78,1169	0/0:19,0:19:54.14:0,54,784	0/0:14,0:14:42.14:0,42,629	0/0:19,0:19:57.18:0,57,834	0/0:17,0:17:51.15:0,51,742	0/0:27,0:27:78.25:0,78,1148	0/0:22,0:22:66.22:0,66,989	0/0:10,0:10:30.10:0,30,447
chr10	2302137	.	CG	C	1431.15	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=6.179;DP=473;FS=4.264;HRun=7;HaplotypeScore=58.0184;InbreedingCoeff=0.9718;MQ=75.35;MQ0=2;MQRankSum=-0.383;QD=22.72;ReadPosRankSum=-0.027;VQSLOD=3.3318;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:75.20:0,75,913	0/0:4,0:4:12.04:0,12,151	0/0:12,0:11:29.96:0,30,328	0/0:15,0:15:20.57:0,21,223	0/0:14,0:14:39.11:0,39,479	0/0:10,0:10:27.07:0,27,326	0/0:22,0:22:57.14:0,57,698	1/1:2,15:16:36.08:367,36,0	0/0:23,0:23:66.19:0,66,805	0/0:16,0:16:36.11:0,36,443	0/0:10,0:10:30.09:0,30,365	0/0:15,0:15:42.13:0,42,527	0/0:18,0:18:45.14:0,45,566	0/0:24,0:24:69.21:0,69,850	0/0:14,0:14:39.12:0,39,491	0/0:17,0:17:48.14:0,48,591	0/0:34,0:33:90.24:0,90,1095	0/0:25,0:25:72.23:0,72,906	0/0:19,0:20:46.92:0,47,553	0/0:5,0:5:15.05:0,15,188	0/0:36,0:36:93.30:0,93,1169	0/0:8,0:8:24.08:0,24,302	0/0:6,0:6:18.06:0,18,226	0/0:26,0:26:69.22:0,69,866	0/0:6,0:6:12.04:0,12,151	1/1:2,15:17:42.09:428,42,0	1/1:0,21:21:59.97:612,60,0	1/1:0,8:8:18.04:184,18,0
chr10	2307392	.	G	GAA	425.97	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-1.567;DP=560;FS=3.398;HRun=10;HaplotypeScore=69.0248;InbreedingCoeff=0.8803;MQ=66.57;MQ0=0;MQRankSum=0.901;QD=32.77;ReadPosRankSum=0.685;VQSLOD=4.1214;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:54.08:0,54,543	0/0:15,0:15:42.09:0,42,427	0/0:7,0:7:14.39:0,14,128	0/0:18,0:14:9.03:0,9,171	0/0:29,0:29:75.09:0,75,762	0/0:31,0:30:84.18:0,84,854	0/0:21,0:21:54.08:0,54,538	0/0:30,0:30:60.07:0,60,602	0/0:15,0:15:42.08:0,42,427	0/0:21,0:20:51.05:0,51,518	0/0:13,0:13:39.09:0,39,396	0/0:16,0:16:39.04:0,39,397	0/0:24,0:24:60.10:0,60,602	0/0:17,0:17:42.09:0,42,427	0/0:20,0:20:54.09:0,54,543	0/0:29,0:29:81.17:0,81,824	1/1:1,11:13:36.12:521,36,0	0/0:14,0:14:39.08:0,39,396	0/0:21,0:21:60.09:0,60,598	0/0:19,0:19:54.11:0,54,544	0/0:22,0:22:57.09:0,57,578	0/0:19,0:20:47.77:0,48,522	0/0:22,0:24:50.56:0,51,544	0/0:13,0:14:33.05:0,33,336	0/0:15,0:15:42.05:0,42,419	0/0:31,0:31:78.15:0,78,793	0/0:33,0:34:63.51:0,64,812	0/0:5,0:5:9:0,9,92
chr10	2307946	.	CAT	C	1365.55	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.294;DP=794;FS=9.806;HRun=0;HaplotypeScore=96.2604;InbreedingCoeff=0.9989;MQ=58.73;MQ0=0;MQRankSum=1.934;QD=35.94;ReadPosRankSum=-0.894;VQSLOD=4.9911;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,135,2700	0/0:11,0:11:30.10:0,30,608	0/0:24,0:21:56.37:0,56,1213	0/0:26,0:22:44.60:0,45,1190	0/0:18,0:18:45.15:0,45,911	0/0:36,0:36:99:0,105,2092	0/0:19,0:19:51.16:0,51,977	0/0:34,0:34:99:0,99,1945	1/1:0,38:38:90.31:1460,90,0	0/0:30,0:30:90.29:0,90,1718	0/0:22,0:22:60.21:0,60,1216	0/0:31,0:31:84.26:0,84,1630	0/0:28,0:28:75.23:0,75,1436	0/0:35,0:35:99:0,99,2008	0/0:38,0:38:99:0,108,2066	0/0:32,0:32:90.25:0,90,1670	0/0:25,0:25:66.17:0,66,1215	0/0:21,0:21:63.21:0,63,1246	0/0:26,0:24:72.24:0,72,1429	0/0:29,0:29:84.27:0,84,1666	0/0:50,0:50:99:0,150,2955	0/0:39,0:39:99:0,105,2052	0/0:31,0:31:90.31:0,90,1814	0/0:15,0:15:45.15:0,45,913	0/0:19,0:19:54.19:0,54,1072	0/0:36,0:36:99:0,108,2145	0/0:24,0:24:72.23:0,72,1424	0/0:10,0:10:30.10:0,30,609
chr10	2308239	.	GTACAGTGCTTATTGGTCTAGCTA	G	155.36	PASS	AB=1.000;AC=3;AF=0.214;AN=14;BaseQRankSum=3.509;DP=924;FS=0.000;HRun=0;HaplotypeScore=25.4580;MQ=10.85;MQ0=456;MQRankSum=-1.858;QD=3.98;ReadPosRankSum=-1.528;VQSLOD=0.5431;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/1:28,0:10:0:0,0,0	./.	./.	./.	./.	./.	1/1:1,10:10:23.98:232,24,0	./.	0/0:68,0:8:21.06:0,21,613	./.	./.	./.	./.	./.	./.	./.	0/0:20,0:1:2.96:0,3,19	0/0:29,0:2:6.02:0,6,175	./.	./.	0/0:54,0:20:0:0,0,0	./.	./.	./.	0/0:3,0:1:3.01:0,3,101	./.	./.
chr10	2309413	.	TG	T	643.03	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.759;DP=625;FS=1.871;HRun=2;HaplotypeScore=57.3342;InbreedingCoeff=0.9819;MQ=71.87;MQ0=1;MQRankSum=-1.812;QD=30.62;ReadPosRankSum=2.228;VQSLOD=3.3236;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:93.28:0,93,1347	0/0:15,0:15:45.14:0,45,654	0/0:33,0:33:93.28:0,93,1347	0/0:19,0:19:57.18:0,57,814	0/0:30,0:30:84.28:0,84,1259	0/0:21,0:21:60.19:0,60,880	0/0:21,0:21:63.20:0,63,923	0/0:32,0:32:93.31:0,93,1389	1/1:1,20:21:18.23:734,18,0	0/0:27,0:27:81.27:0,81,1213	0/0:19,0:19:54.17:0,54,788	0/0:22,0:22:63.20:0,63,925	0/0:20,0:20:60.20:0,60,875	0/0:20,0:20:60.19:0,60,875	0/0:26,0:26:78.26:0,78,1169	0/0:21,0:21:63.21:0,63,944	0/0:21,0:21:60.19:0,60,874	0/0:8,0:8:23.29:0,23,321	0/0:8,0:7:18.04:0,18,248	0/0:31,0:31:93.30:0,93,1370	0/0:20,0:20:57.19:0,57,849	0/0:19,0:19:57.18:0,57,826	0/0:23,0:23:66.22:0,66,989	0/0:25,0:25:72.24:0,72,1079	0/0:14,0:14:42.14:0,42,628	0/0:20,0:20:60.20:0,60,900	0/0:41,0:41:99:0,123,1840	0/0:17,0:17:51.17:0,51,764
chr10	2309689	.	C	CCT	509.24	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.676;DP=593;FS=8.752;HRun=0;HaplotypeScore=70.9636;InbreedingCoeff=0.9991;MQ=91.66;MQ0=0;MQRankSum=-1.937;QD=33.95;ReadPosRankSum=2.166;VQSLOD=5.3759;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:81.25:0,81,1295	0/0:12,0:12:36.12:0,36,587	0/0:32,0:33:90.29:0,90,1408	0/0:21,0:21:57.06:0,57,827	0/0:29,0:29:84.27:0,84,1344	0/0:23,0:23:69.18:0,69,1030	0/0:12,0:12:36.11:0,36,562	0/0:34,0:34:99:0,102,1569	1/1:1,14:15:32.02:604,32,0	0/0:16,0:16:48.15:0,48,742	0/0:17,0:17:51.17:0,51,832	0/0:15,0:15:45.15:0,45,734	0/0:22,0:22:66.21:0,66,1051	0/0:21,0:21:63.22:0,63,1025	0/0:16,0:16:48.16:0,48,783	0/0:18,0:18:54.16:0,54,833	0/0:18,0:18:54.16:0,54,847	0/0:13,0:13:36.12:0,36,587	0/0:21,0:21:63.20:0,63,1003	0/0:34,0:34:99:0,102,1638	0/0:18,0:18:51.16:0,51,803	0/0:18,0:18:48.15:0,48,759	0/0:31,0:31:87.28:0,87,1380	0/0:19,0:19:57.17:0,57,874	0/0:13,0:13:36.10:0,36,540	0/0:20,0:20:60.19:0,60,954	0/0:34,0:33:99:0,102,1613	0/0:22,0:22:66.06:0,66,1041
chr10	2311292	.	C	CGAGA	1025.21	PASS	AB=0.959;AC=15;AF=0.300;AN=50;BaseQRankSum=-0.842;DP=567;FS=5.422;HRun=0;HaplotypeScore=109.8867;InbreedingCoeff=0.1651;MQ=57.11;MQ0=10;MQRankSum=-1.193;QD=4.12;ReadPosRankSum=-1.170;VQSLOD=1.8314;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:16:18.50:0,18,217	0/0:10,0:10:9.28:0,9,50	./.	./.	./.	0/1:26,0:27:18.03:18,0,86	0/0:12,0:16:11.97:0,12,117	1/1:16,0:16:2.98:21,3,0	0/0:22,0:28:5.86:0,6,55	0/1:18,0:19:6.44:6,0,65	0/0:18,0:18:14.84:0,15,196	0/0:14,0:14:6.28:0,6,215	0/0:16,0:24:17.24:0,17,184	0/0:15,0:18:13.58:0,14,154	1/1:18,5:26:8.74:136,9,0	1/1:9,9:19:20.20:317,20,0	1/1:15,6:23:9.78:243,10,0	0/0:21,0:21:29.42:0,29,372	0/0:12,0:13:6.01:0,6,56	0/0:19,0:24:3:0,3,28	0/0:16,0:17:6.01:0,6,74	0/1:25,0:24:15.84:16,0,83	0/0:18,0:24:8.52:0,9,83	0/1:8,0:11:27.24:27,0,97	0/1:18,0:18:82.33:96,0,82	0/1:37,0:37:50.09:230,0,50	0/1:15,7:25:37.43:72,0,37	0/0:9,0:9:5.65:0,6,56
chr10	2317113	.	T	TA	6049.56	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-11.943;DP=744;FS=0.345;HRun=1;HaplotypeScore=63.6457;InbreedingCoeff=0.9989;MQ=55.73;MQ0=11;MQRankSum=2.235;QD=36.44;ReadPosRankSum=-0.704;VQSLOD=4.6135;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,25:25:69.12:981,69,0	0/0:13,0:13:36.12:0,36,467	0/0:29,0:15:39.11:0,39,464	0/0:34,0:16:42.09:0,42,515	0/0:32,0:32:96.31:0,96,1246	0/0:28,0:27:84.25:0,84,1074	0/0:20,0:20:54.17:0,54,699	1/1:6,40:30:84.23:1167,84,0	0/0:29,0:29:85.79:0,86,1062	0/0:39,0:38:99:0,108,1387	0/0:25,0:24:69.21:0,69,880	0/0:20,0:20:57.19:0,57,740	0/0:27,0:27:81.26:0,81,1051	0/0:28,0:28:81.22:0,81,1033	0/0:33,0:33:96.28:0,96,1216	0/0:20,0:20:54.18:0,54,701	1/1:2,20:22:54.18:801,54,0	0/0:16,0:16:48.09:0,48,599	0/0:19,0:17:51.14:0,51,636	0/0:35,0:35:96.31:0,96,1243	0/0:35,0:34:99:0,99,1268	0/0:29,0:29:87.23:0,87,1075	0/0:23,0:23:69.18:0,69,863	0/0:20,0:20:60.20:0,60,779	0/0:24,0:23:69.21:0,69,882	1/1:1,21:22:27.33:903,27,0	1/1:1,43:44:99:1883,126,0	1/1:0,7:7:21.07:315,21,0
chr10	2317593	.	AT	A	3959.23	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=15.210;DP=611;FS=0.807;HRun=3;HaplotypeScore=68.3274;InbreedingCoeff=0.9505;MQ=57.23;MQ0=13;MQRankSum=-2.661;QD=31.67;ReadPosRankSum=-1.322;VQSLOD=3.1318;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:84.25:0,84,1172	0/0:6,0:6:18.06:0,18,259	0/0:11,0:3:6.02:0,6,81	0/0:15,0:3:5.96:0,6,86	0/0:29,0:29:81.27:0,81,1167	0/0:17,0:17:51.17:0,51,734	0/0:21,0:21:60.19:0,60,846	1/1:6,23:26:60.17:730,60,0	1/1:2,21:23:63.20:775,63,0	0/0:24,0:23:63.21:0,63,907	0/0:24,0:24:72.24:0,72,1036	0/0:16,0:16:48.16:0,48,691	0/0:25,0:25:75.25:0,75,1080	0/0:19,0:19:57.19:0,57,807	0/0:17,0:17:48.16:0,48,690	0/0:33,0:33:87.29:0,87,1253	0/0:20,0:20:60.19:0,60,846	0/0:22,0:22:66.18:0,66,927	0/0:20,0:20:60.13:0,60,819	0/0:32,0:32:93.31:0,93,1339	0/0:14,0:13:42.14:0,42,601	0/0:19,0:19:57.19:0,57,819	0/0:28,0:28:81.26:0,81,1146	0/0:23,0:23:69.23:0,69,991	0/0:22,0:22:66.22:0,66,935	1/1:1,26:27:78.21:934,78,0	1/1:2,35:37:96.30:1185,96,0	1/1:0,9:9:27.08:335,27,0
chr10	2317761	.	AT	A	2499.78	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=10.820;DP=565;FS=3.712;HRun=8;HaplotypeScore=52.5236;InbreedingCoeff=0.9669;MQ=63.80;MQ0=0;MQRankSum=0.497;QD=21.93;ReadPosRankSum=-0.174;VQSLOD=3.8590;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:78.14:0,78,893	0/0:9,0:9:27.08:0,27,326	0/0:16,1:15:13.02:0,13,402	0/0:11,0:10:30.08:0,30,344	0/0:30,0:30:87.26:0,87,1041	0/0:18,0:18:51.16:0,51,616	0/0:8,0:8:24.07:0,24,290	1/1:2,30:32:90.09:852,90,0	0/0:18,0:18:51.16:0,51,615	0/0:30,0:30:87.27:0,87,1050	0/0:24,0:24:64.08:0,64,763	0/0:15,0:15:45.12:0,45,529	0/0:13,0:13:36.11:0,36,435	0/0:14,0:14:36.09:0,36,406	0/0:14,0:14:36.11:0,36,435	0/0:21,0:21:63.19:0,63,761	1/1:3,17:20:42.06:406,42,0	0/0:13,0:13:24.07:0,24,290	0/0:24,0:24:66.19:0,66,786	0/0:34,0:34:87.16:0,87,1031	0/0:17,0:17:51.12:0,51,582	0/0:22,0:22:60.16:0,60,704	0/0:26,0:26:78.22:0,78,929	0/0:14,0:14:42.12:0,42,497	0/0:32,0:32:93.29:0,93,1122	1/1:2,13:15:5.83:340,6,0	1/1:2,31:33:84.13:811,84,0	1/1:0,14:14:27.04:261,27,0
chr10	2318059	.	CAAAA	C	3673.68	PASS	AB=0.540;AC=12;AF=0.214;AN=56;BaseQRankSum=7.076;DP=576;FS=0.847;HRun=14;HaplotypeScore=103.9183;InbreedingCoeff=0.8096;MQ=74.20;MQ0=1;MQRankSum=-2.511;QD=23.40;ReadPosRankSum=5.601;VQSLOD=2.6676;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,18:26:38.98:514,39,0	0/0:4,0:4:12.03:0,12,239	0/0:24,0:21:30.91:0,31,346	0/0:17,0:14:27.53:0,28,417	0/0:17,0:20:48.11:0,48,961	0/0:27,0:35:90.24:0,90,1583	0/0:13,0:17:36.12:0,36,798	1/1:10,25:36:58.91:926,59,0	0/1:4,0:19:13.22:13,0,16	0/0:24,0:25:55.04:0,55,1071	0/0:22,0:24:69.21:0,69,1385	0/0:16,0:17:48.05:0,48,761	0/0:17,0:17:48.08:0,48,775	0/0:17,0:19:48.07:0,48,946	0/0:17,0:17:39.10:0,39,723	0/0:16,0:16:36.10:0,36,666	1/1:2,14:16:35.23:508,35,0	0/0:9,0:9:21.02:0,21,341	0/0:24,0:26:63.17:0,63,1123	0/0:36,0:36:96.15:0,96,1741	0/0:9,0:10:24.08:0,24,493	0/0:21,0:22:57.12:0,57,1045	0/0:19,0:21:57.01:0,57,968	0/0:16,0:20:57.17:0,57,1101	0/0:22,0:23:56.88:0,57,998	0/1:2,20:24:6.38:695,0,6	1/1:2,23:25:47.50:678,47,0	1/1:3,8:11:24.03:340,24,0
chr10	2318573	.	CAAGACTGT	C	1344.34	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.316;DP=596;FS=23.022;HRun=0;HaplotypeScore=155.4357;InbreedingCoeff=0.9371;MQ=88.92;MQ0=1;MQRankSum=-6.232;QD=70.75;ReadPosRankSum=1.191;VQSLOD=2.2659;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:60.21:0,60,2624	0/0:6,0:6:18.06:0,18,797	0/0:19,0:19:44.59:0,45,1084	0/0:26,0:26:54.58:0,55,1343	0/0:20,0:20:60.21:0,60,2567	0/0:26,0:26:75.24:0,75,3145	0/0:22,0:22:60.18:0,60,2324	0/0:26,0:26:75.26:0,75,2963	1/1:2,17:19:51.18:1439,51,0	0/0:26,0:26:69.21:0,69,2599	0/0:16,0:16:45.14:0,45,1821	0/0:24,0:24:72.25:0,72,3057	0/0:23,0:23:66.19:0,66,2592	0/0:24,0:24:69.24:0,69,2933	0/0:32,0:32:90.30:0,90,3823	0/0:24,0:24:72.21:0,72,2867	0/0:14,0:14:27.09:0,27,1062	0/0:14,0:13:39.13:0,39,1675	0/0:20,0:20:57.18:0,57,2393	0/0:24,0:24:72.25:0,72,3101	0/0:30,0:30:90.28:0,90,3651	0/0:19,0:19:54.17:0,54,2281	0/0:23,0:23:66.21:0,66,2750	0/0:20,0:20:57.20:0,57,2491	0/0:23,0:23:63.21:0,63,2616	0/0:21,0:21:60.19:0,60,2439	0/0:18,0:17:38.50:0,39,1605	0/0:4,0:4:9.03:0,9,399
chr10	2318619	.	GTGTGTGTGTGTT	G	1115.20	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=6.219;DP=707;FS=0.000;HRun=0;HaplotypeScore=239.2168;InbreedingCoeff=0.5911;MQ=64.05;MQ0=11;MQRankSum=-1.282;QD=8.64;ReadPosRankSum=-0.416;VQSLOD=2.3537;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:10,38:48:3.01:0,3,48	0/0:10,0:10:27.05:0,27,958	0/0:26,0:18:17.17:0,17,189	0/0:40,0:23:1.28:0,1,264	0/0:26,0:25:66.18:0,66,2665	0/0:27,0:27:70.42:0,70,2339	0/0:20,0:20:45.05:0,45,1168	1/1:28,0:27:5.35:290,5,0	0/1:23,0:23:2.94:3,0,519	0/0:22,0:22:51.14:0,51,1613	0/0:22,0:22:54.48:0,54,2023	0/0:22,0:22:47.42:0,47,1421	0/0:22,0:22:56.81:0,57,1568	0/0:22,0:22:60.01:0,60,2450	0/0:31,0:31:82.58:0,83,3020	0/0:23,0:23:57.16:0,57,2070	0/1:19,0:19:0.93:64,0,1	0/0:17,0:16:26.69:0,27,1350	0/0:16,0:16:38.62:0,39,652	0/0:36,0:36:65.23:0,65,3135	0/0:43,0:40:97.88:0,98,3918	0/0:20,0:20:37.31:0,37,640	0/0:24,0:24:72.12:0,72,2530	0/0:33,0:32:81.19:0,81,3288	0/0:28,0:28:63.01:0,63,1231	1/1:32,0:32:60.27:556,60,0	1/1:19,2:20:14.34:304,14,0	0/1:6,0:6:43.53:44,0,120
chr10	2318621	.	GTGTGTGTGTT	G	1812.50	PASS	AB=0.715;AC=9;AF=0.161;AN=56;BaseQRankSum=4.840;DP=707;FS=1.100;HRun=0;HaplotypeScore=213.7548;InbreedingCoeff=0.6186;MQ=63.46;MQ0=11;MQRankSum=-2.195;QD=14.62;ReadPosRankSum=-0.401;VQSLOD=2.7131;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:2.99:0,3,24	0/0:10,0:10:27.05:0,27,808	0/0:25,0:17:17.17:0,17,189	0/0:40,0:23:1.13:0,1,264	0/0:27,0:26:69.19:0,69,2423	0/0:28,0:28:73.42:0,73,2099	0/0:20,0:20:45.05:0,45,1007	1/1:26,0:25:21.67:307,22,0	0/1:21,0:21:3.10:3,0,436	0/0:23,0:23:54.15:0,54,1470	0/0:23,0:23:58.36:0,58,1870	0/0:23,0:23:50.21:0,50,1351	0/0:22,0:22:56.80:0,57,1333	0/0:23,0:23:63.04:0,63,2170	0/0:31,0:31:82.69:0,83,2653	0/0:23,0:23:57.16:0,57,1803	0/1:3,15:18:0.89:101,0,1	0/0:17,0:16:23.12:0,23,1149	0/0:16,0:16:37.41:0,37,612	0/0:36,0:36:65.26:0,65,2712	0/0:42,0:39:97.88:0,98,3361	0/0:22,0:22:39.83:0,40,542	0/0:25,0:25:75.05:0,75,2245	0/0:33,0:32:84.20:0,84,2925	0/0:28,0:28:62.91:0,63,1051	1/1:3,29:32:14.76:1126,15,0	1/1:7,14:21:14.06:337,14,0	0/1:2,4:6:88.39:88,0,94
chr10	2318631	.	TTG	T	543.74	PASS	AB=0.942;AC=21;AF=0.404;AN=52;BaseQRankSum=6.346;DP=699;FS=10.068;HRun=0;HaplotypeScore=122.9708;InbreedingCoeff=-0.0320;MQ=56.89;MQ0=17;MQRankSum=-0.718;QD=1.28;ReadPosRankSum=1.340;VQSLOD=1.7780;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:2.99:0,3,23	0/1:9,0:9:10.67:11,0,194	./.	./.	0/0:26,0:26:14.41:0,14,552	0/1:24,5:30:24.70:25,0,473	0/1:19,3:22:9.76:10,0,211	0/0:25,0:23:8.29:0,8,39	0/0:21,0:21:13.26:0,13,150	0/0:21,0:21:35.75:0,36,397	0/0:22,0:22:15.22:0,15,481	0/1:24,0:24:33.56:34,0,338	0/1:20,2:22:9.58:10,0,268	0/1:23,2:25:82.95:83,0,503	0/0:29,1:31:17.51:0,18,662	0/1:20,2:22:11.70:12,0,384	0/1:17,0:17:7.05:7,0,25	0/0:18,0:17:23.84:0,24,282	0/0:13,0:13:9.03:0,9,131	0/1:35,2:36:3.93:4,0,733	0/1:48,2:46:80.44:80,0,748	1/1:10,9:21:18.03:140,18,0	0/1:25,0:26:10.56:11,0,525	0/1:33,3:36:15.43:15,0,688	1/1:18,9:27:12.02:132,12,0	1/1:32,0:31:16:80,16,0	1/1:18,0:16:10.25:50,10,0	0/1:7,0:6:7.07:7,0,18
chr10	2319231	.	AG	A	7095.73	PASS	AB=0.663;AC=48;AF=0.857;AN=56;BaseQRankSum=-9.317;DP=493;FS=4.350;HRun=11;HaplotypeScore=64.2007;InbreedingCoeff=0.5690;MQ=87.98;MQ0=0;MQRankSum=-1.712;QD=16.20;ReadPosRankSum=1.091;VQSLOD=5.8146;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,26:31:73.95:597,74,0	1/1:3,4:7:11.98:98,12,0	0/1:18,9:25:99:140,0,115	0/0:16,0:16:16.15:0,16,159	0/1:6,16:23:7.98:344,0,8	1/1:4,11:16:34.98:277,35,0	1/1:4,13:18:37.99:301,38,0	1/1:2,7:10:23.01:178,23,0	1/1:6,12:18:26.82:222,27,0	1/1:1,13:14:35.93:291,36,0	1/1:2,10:12:26.95:222,27,0	1/1:4,9:13:23.95:197,24,0	1/1:4,6:10:17.97:148,18,0	1/1:2,8:10:23.97:197,24,0	1/1:4,13:18:38.86:303,39,0	1/1:3,22:26:64.96:523,65,0	0/0:36,1:37:81.27:0,81,605	1/1:4,10:14:0.97:214,1,0	1/1:8,7:16:25.96:200,26,0	1/1:8,11:21:36.97:277,37,0	1/1:3,17:21:46.96:375,47,0	1/1:4,11:16:37.98:301,38,0	1/1:2,15:18:32:252,32,0	1/1:3,14:17:41.95:345,42,0	1/1:4,12:16:29.94:246,30,0	1/1:5,16:21:44.94:369,45,0	1/1:5,19:25:45.28:478,45,0	0/0:2,0:2:0:0,0,0
chr10	2321499	.	GGAGGGA	G	1276.27	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=7.868;DP=525;FS=3.032;HRun=0;HaplotypeScore=114.2680;InbreedingCoeff=0.7246;MQ=57.63;MQ0=15;MQRankSum=-4.591;QD=9.32;ReadPosRankSum=0.578;VQSLOD=2.6310;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:18:13.11:226,13,0	0/0:8,0:8:12:0,12,256	0/1:37,0:8:2.71:3,0,19	0/0:66,0:21:13.53:0,14,153	0/0:20,0:20:51.13:0,51,1210	0/0:9,0:9:27.09:0,27,787	0/0:21,0:21:51.16:0,51,1407	1/1:16,0:14:15.28:129,15,0	1/1:16,3:19:23.36:354,23,0	0/0:16,0:16:42.10:0,42,934	0/0:17,0:17:39.10:0,39,853	0/0:7,0:6:15.04:0,15,367	0/0:19,0:19:50.33:0,50,1430	0/0:15,0:13:36.12:0,36,1070	0/0:27,0:27:68.76:0,69,1903	0/0:17,0:17:46.96:0,47,1162	1/1:10,1:11:14.90:199,15,0	0/0:15,0:15:39.13:0,39,1027	0/0:14,0:9:18.04:0,18,383	0/0:14,0:14:24.03:0,24,565	0/0:28,0:27:72:0,72,1577	0/0:21,0:21:63.20:0,63,1562	0/0:17,0:17:48.10:0,48,1212	0/0:19,0:19:36.12:0,36,1140	0/0:16,0:16:42.03:0,42,984	0/1:18,0:18:3.84:336,0,4	0/1:11,0:11:72.38:105,0,72	1/1:5,0:5:8.98:98,9,0
chr10	2321509	.	GGAGAGGGA	G	1670.88	PASS	AB=1.000;AC=10;AF=0.179;AN=56;BaseQRankSum=6.491;DP=571;FS=0.597;HRun=0;HaplotypeScore=143.2950;InbreedingCoeff=0.7022;MQ=54.79;MQ0=18;MQRankSum=-5.037;QD=19.43;ReadPosRankSum=-1.130;VQSLOD=3.0049;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:18:1.60:26,2,0	0/0:8,0:8:15.01:0,15,418	0/0:44,0:10:5.23:0,5,232	0/0:63,0:16:19:0,19,305	0/0:20,0:20:54.17:0,54,1713	0/0:10,0:10:30.10:0,30,1171	0/0:21,0:21:57.20:0,57,2079	1/1:20,1:18:16.32:456,16,0	0/0:18,0:18:5.18:0,5,183	0/0:17,0:17:48.15:0,48,1453	0/0:19,0:19:51.15:0,51,1411	0/0:9,0:8:21.07:0,21,589	0/0:20,0:20:56.36:0,56,2061	0/0:20,0:18:51.17:0,51,1769	0/0:31,0:31:81.26:0,81,2846	0/0:19,0:19:37.20:0,37,1795	0/1:11,0:11:11.70:32,0,12	0/0:16,0:16:45.15:0,45,1623	0/0:18,0:13:36.12:0,36,874	0/0:18,0:18:42.11:0,42,1152	0/0:30,0:29:84.21:0,84,2459	0/0:24,0:24:72.25:0,72,2513	0/0:22,0:22:63.16:0,63,1964	0/0:21,0:21:44.49:0,44,1720	0/0:17,0:17:45.15:0,45,1459	1/1:15,4:19:20.66:796,21,0	1/1:11,2:13:12.93:353,13,0	0/1:4,0:4:1.72:164,0,2
chr10	2321513	.	AGG	A	1125.13	PASS	AB=1.000;AC=12;AF=0.214;AN=56;BaseQRankSum=10.869;DP=567;FS=0.000;HRun=3;HaplotypeScore=93.3869;InbreedingCoeff=0.7714;MQ=53.03;MQ0=17;MQRankSum=-7.037;QD=10.42;ReadPosRankSum=-2.999;VQSLOD=-0.6594;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:19:1.59:53,2,0	0/0:7,0:7:19.79:0,20,263	0/0:40,0:8:14.94:0,15,216	0/0:56,0:13:17.40:0,17,171	0/0:20,0:20:54.13:0,54,891	0/0:10,0:10:30.10:0,30,579	0/0:21,0:21:57.20:0,57,1089	1/1:23,0:20:40.62:278,41,0	0/1:19,0:19:60.03:60,0,85	0/0:18,0:18:51.13:0,51,853	0/0:17,0:17:51.13:0,51,818	0/0:11,0:10:13.28:0,13,347	0/0:22,0:22:62.50:0,63,1069	0/0:19,0:17:51.17:0,51,966	0/0:29,0:29:83.75:0,84,1497	0/0:21,1:22:46.17:0,46,1028	0/1:11,0:11:1.50:56,0,1	0/0:16,0:16:48.14:0,48,887	0/0:17,0:12:36.09:0,36,586	0/0:16,0:16:41.77:0,42,724	0/0:31,0:30:90.14:0,90,1464	0/0:25,0:25:73.80:0,74,1360	0/0:21,0:21:63.16:0,63,1129	0/0:22,0:22:47.84:0,48,881	0/0:19,0:19:51.16:0,51,897	1/1:16,3:19:50.33:483,50,0	1/1:13,0:13:29.63:248,30,0	1/1:4,0:4:11.93:119,12,0
chr10	2321515	.	GGA	G	500.98	PASS	AB=0.923;AC=10;AF=0.179;AN=56;BaseQRankSum=8.542;DP=578;FS=1.449;HRun=0;HaplotypeScore=98.1761;InbreedingCoeff=0.4756;MQ=53.23;MQ0=17;MQRankSum=-6.998;QD=4.96;ReadPosRankSum=-1.350;VQSLOD=2.8708;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:19,0:19:21.26:25,0,21	0/0:7,0:7:15.05:0,15,244	0/0:37,0:7:12.04:0,12,193	0/0:52,0:11:10.33:0,10,114	0/0:20,0:20:42.14:0,42,706	0/0:10,0:10:30.10:0,30,506	0/0:23,0:23:24.96:0,25,942	0/1:17,7:21:18.50:223,0,18	0/0:20,0:20:11.69:0,12,184	0/0:19,0:19:45.15:0,45,731	0/0:18,0:18:42.13:0,42,660	0/1:10,1:10:14.51:15,0,323	0/0:23,0:23:59.50:0,60,948	0/0:20,0:18:54.18:0,54,900	0/0:29,0:29:81.27:0,81,1339	0/0:23,0:23:57.19:0,57,950	0/1:11,0:11:7.09:7,0,23	0/0:18,0:18:54.13:0,54,845	0/0:20,0:15:33.07:0,33,500	0/0:16,0:16:36.12:0,36,606	0/0:31,0:30:75.26:0,75,1243	0/0:25,0:25:72.21:0,72,1158	0/0:22,0:22:60.19:0,60,978	0/0:22,1:23:53.85:0,54,852	0/0:20,0:20:51.16:0,51,822	1/1:18,1:19:27.07:273,27,0	1/1:13,0:13:13.21:70,13,0	1/1:4,0:4:6.38:41,6,0
chr10	2321518	.	G	GAC	969.03	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=10.906;DP=571;FS=0.000;HRun=0;HaplotypeScore=102.6210;InbreedingCoeff=0.5947;MQ=51.16;MQ0=15;MQRankSum=-8.203;QD=10.20;ReadPosRankSum=-2.510;VQSLOD=2.4341;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:19,0:19:5.89:6,0,86	0/0:7,0:7:17.97:0,18,236	0/0:35,0:6:15.02:0,15,199	0/0:49,0:9:17.37:0,17,168	0/0:20,0:20:51.13:0,51,715	0/0:10,0:10:30.10:0,30,458	0/0:23,0:23:62.93:0,63,906	0/1:27,0:24:78.35:151,0,78	0/0:19,0:19:7.32:0,7,151	0/0:16,0:16:48.14:0,48,696	0/0:20,0:20:48.12:0,48,655	0/0:11,0:10:27:0,27,361	0/0:24,0:24:66.13:0,66,914	0/0:19,0:18:54.18:0,54,822	0/0:29,0:29:81.27:0,81,1226	0/0:22,0:22:63.19:0,63,918	0/1:12,0:12:8:8,0,81	0/0:18,0:18:35.17:0,35,733	0/0:20,0:16:42.03:0,42,546	0/0:15,0:15:39.12:0,39,575	0/0:30,0:29:84.24:0,84,1218	0/0:25,0:25:71.92:0,72,1058	0/0:21,0:21:60.19:0,60,894	0/0:23,0:23:53.17:0,53,779	0/0:20,0:20:54.16:0,54,781	1/1:17,3:19:44.03:436,44,0	1/1:6,7:13:32.89:457,33,0	1/1:4,0:4:8.91:62,9,0
chr10	2321528	.	C	CAGAG	1665.12	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=12.670;DP=575;FS=4.751;HRun=0;HaplotypeScore=124.5523;InbreedingCoeff=0.8289;MQ=51.35;MQ0=14;MQRankSum=-10.866;QD=14.35;ReadPosRankSum=-2.468;VQSLOD=2.3498;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:16,4:19:7.68:92,8,0	0/0:8,0:8:18.04:0,18,300	0/0:29,0:5:12.04:0,12,210	0/0:46,0:7:2.26:0,2,126	0/0:15,0:15:39.12:0,39,648	0/0:10,0:10:30.10:0,30,541	0/0:25,0:25:60.16:0,60,995	0/1:28,0:26:38:284,0,38	1/1:11,6:17:25.55:425,26,0	0/0:20,0:18:42.04:0,42,717	0/0:17,0:16:42.14:0,42,741	0/0:13,0:12:33.10:0,33,549	0/0:24,0:24:65.51:0,66,1127	0/0:19,0:19:57.18:0,57,1016	0/0:30,0:30:84.27:0,84,1500	0/0:22,0:22:63.15:0,63,1027	1/1:11,1:12:12.03:179,12,0	0/0:19,0:19:53.98:0,54,880	0/0:16,0:15:39.07:0,39,556	0/0:18,0:18:48.04:0,48,745	0/0:33,0:33:83.46:0,83,1367	0/0:26,0:26:72.67:0,73,1202	0/0:24,0:24:60.08:0,60,960	0/0:23,0:23:54.08:0,54,969	0/0:21,0:21:48.14:0,48,798	1/1:22,0:21:44.44:402,44,0	1/1:12,0:12:27.01:385,27,0	1/1:5,0:5:11.51:81,12,0
chr10	2321530	.	GAGAC	G	1184.72	PASS	AB=0.855;AC=9;AF=0.161;AN=56;BaseQRankSum=9.869;DP=576;FS=0.580;HRun=0;HaplotypeScore=117.8243;InbreedingCoeff=0.2995;MQ=51.38;MQ0=14;MQRankSum=-7.833;QD=10.58;ReadPosRankSum=-2.729;VQSLOD=2.7634;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:18,2:19:13.74:37,0,14	0/0:7,0:7:18.06:0,18,453	0/0:31,0:5:12.04:0,12,280	0/0:47,0:7:9.41:0,9,231	0/0:16,0:16:42.09:0,42,879	0/0:10,0:10:30.10:0,30,756	0/0:25,0:25:69.19:0,69,1488	0/1:12,16:26:99:694,0,217	0/1:15,2:17:31.77:32,0,61	0/0:19,0:17:45.03:0,45,1011	0/0:18,0:17:45.15:0,45,1095	0/0:13,0:12:33.11:0,33,786	0/0:24,0:24:68.34:0,68,1698	0/0:20,0:20:60.21:0,60,1500	0/0:30,0:30:84.75:0,85,2163	0/0:22,0:22:63.17:0,63,1491	0/1:11,0:11:12.72:40,0,13	0/0:20,0:20:56.96:0,57,1272	0/0:16,0:15:42.09:0,42,825	0/0:18,0:18:50.30:0,50,1076	0/0:33,0:33:89.52:0,90,2038	0/0:26,0:26:72.21:0,72,1676	0/0:26,0:26:66.18:0,66,1461	0/0:23,0:24:56.65:0,57,1440	0/0:19,0:19:47.51:0,48,1093	0/1:16,4:19:24.29:328,0,24	1/1:10,1:11:6.25:88,6,0	1/1:2,2:5:14.05:111,14,0
chr10	2321534	.	C	CAG	1538.70	PASS	AB=0.850;AC=11;AF=0.196;AN=56;BaseQRankSum=10.624;DP=588;FS=1.840;HRun=0;HaplotypeScore=101.3142;InbreedingCoeff=0.6118;MQ=50.53;MQ0=15;MQRankSum=-10.389;QD=13.62;ReadPosRankSum=-1.916;VQSLOD=2.9735;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:14,5:18:8.46:61,8,0	0/0:8,0:8:18.06:0,18,233	0/0:31,0:7:15.02:0,15,165	0/0:45,0:8:3.94:0,4,136	0/0:16,0:16:30.10:0,30,387	0/0:11,0:11:27.09:0,27,349	0/0:24,0:24:54.17:0,54,700	0/1:28,0:26:99:545,0,124	1/1:13,6:19:8.93:233,9,0	0/0:17,0:15:36.11:0,36,464	0/0:19,0:18:42.12:0,42,530	0/0:14,0:14:36.10:0,36,452	0/0:24,0:24:69.18:0,69,863	0/0:22,0:22:66.18:0,66,824	0/0:32,0:32:87.72:0,88,1100	0/0:22,0:22:54.18:0,54,702	0/1:6,5:11:1.28:85,0,1	0/0:21,0:20:48.15:0,48,619	0/0:15,0:14:30.09:0,30,378	0/0:20,0:20:51.03:0,51,617	0/0:37,0:37:84.05:0,84,1038	0/0:24,0:24:59.86:0,60,776	0/0:24,0:24:57.15:0,57,709	0/0:27,0:27:57.01:0,57,719	0/0:19,0:19:39.11:0,39,492	0/1:16,3:18:15.13:374,0,15	1/1:6,7:13:8.34:324,8,0	1/1:4,0:4:5.25:70,5,0
chr10	2321561	.	G	GCAGAGA	2317.04	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=2.953;DP=586;FS=0.600;HRun=0;HaplotypeScore=145.8140;InbreedingCoeff=0.8702;MQ=55.78;MQ0=16;MQRankSum=-6.883;QD=14.66;ReadPosRankSum=-4.303;VQSLOD=1.4836;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,14:27:11.91:211,12,0	0/0:6,0:6:15.05:0,15,315	0/1:32,0:16:1.01:1,0,372	0/0:33,0:17:4.47:0,4,286	0/0:15,0:15:17.70:0,18,337	0/0:8,0:8:18.06:0,18,365	0/0:26,0:26:51.17:0,51,1038	1/1:36,0:36:47.91:721,48,0	1/1:7,11:19:17.99:337,18,0	0/0:17,0:16:33.11:0,33,680	0/0:20,0:19:30.09:0,30,588	0/0:17,0:17:39.12:0,39,780	0/0:25,0:25:57.17:0,57,1139	0/0:21,0:21:42.12:0,42,806	0/0:27,0:27:51.10:0,51,853	0/0:24,0:23:48.16:0,48,995	0/0:13,0:13:15.15:0,15,299	0/0:21,0:20:39.11:0,39,751	0/0:8,0:8:12.01:0,12,176	0/0:14,0:14:30.09:0,30,580	0/0:46,0:46:99:0,102,1922	0/0:17,0:17:33.56:0,34,613	0/0:22,0:22:42.10:0,42,742	0/0:29,0:29:63.14:0,63,1133	0/0:14,0:14:24.08:0,24,490	1/1:13,8:21:26.82:636,27,0	1/1:8,8:17:17.96:433,18,0	1/1:3,1:3:6.02:156,6,0
chr10	2322891	.	GCT	G	306.69	PASS	AB=0.968;AC=22;AF=0.550;AN=40;BaseQRankSum=2.022;DP=507;FS=4.971;HRun=0;HaplotypeScore=63.5403;InbreedingCoeff=0.1568;MQ=72.80;MQ0=21;MQRankSum=-0.094;QD=1.39;ReadPosRankSum=1.493;VQSLOD=1.1501;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:23:12.01:0,12,137	0/0:9,0:9:1.25:0,1,3	./.	./.	1/1:9,0:8:2.75:25,3,0	0/1:20,0:20:16.12:41,0,16	1/1:15,0:17:5.66:39,6,0	./.	0/1:12,0:12:27.57:38,0,28	0/0:20,0:20:5.94:0,6,54	./.	0/0:13,0:13:11.97:0,12,106	0/1:13,0:13:10.04:10,0,42	0/0:17,0:17:21.02:0,21,225	0/1:17,0:17:13.05:13,0,81	0/0:17,0:17:9.02:0,9,108	1/1:12,0:11:2.84:14,3,0	0/1:13,4:16:19.93:20,0,115	1/1:20,0:20:8.95:68,9,0	./.	0/1:27,0:27:4.99:40,0,5	./.	1/1:13,0:13:2.99:24,3,0	1/1:13,7:20:6.02:64,6,0	./.	1/1:13,0:13:6.43:44,6,0	1/1:11,0:11:0.47:1,0,0	./.
chr10	2322926	.	CTCTCTCTCTCTCTCT	C	62.02	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=0.895;DP=428;FS=3.510;HRun=0;HaplotypeScore=132.7807;InbreedingCoeff=0.6429;MQ=55.64;MQ0=21;MQRankSum=-3.772;QD=6.89;ReadPosRankSum=-2.996;VQSLOD=1.9585;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:19:33.43:0,33,1938	0/0:3,0:3:9.03:0,9,512	0/0:35,0:11:29.96:0,30,279	0/0:37,0:10:19.55:0,20,186	0/0:9,0:9:18.53:0,19,693	0/0:18,0:18:47.43:0,47,1763	0/0:24,0:23:56.23:0,56,1630	0/0:13,0:13:30.39:0,30,871	0/0:6,0:6:12.04:0,12,607	0/0:17,0:17:51.17:0,51,2206	0/0:11,0:11:26.77:0,27,933	0/0:17,0:17:47.50:0,47,1568	0/0:10,0:10:27.09:0,27,1153	0/0:23,0:22:53.24:0,53,2709	0/0:14,0:14:31.55:0,32,1256	0/0:12,0:12:33.10:0,33,1554	1/1:2,7:7:3.01:139,3,0	0/0:15,0:15:33.10:0,33,1297	0/0:19,0:19:55.45:0,55,1567	0/0:18,0:18:39.12:0,39,1462	0/0:20,0:19:35.98:0,36,1194	0/0:12,0:11:21.53:0,22,755	0/0:8,0:8:21.06:0,21,772	0/0:24,0:24:35.91:0,36,1187	0/0:10,0:10:27.08:0,27,971	0/0:12,0:10:24.12:0,24,566	0/0:7,0:7:15.05:0,15,422	0/0:4,0:3:8.99:0,9,177
chr10	2324223	.	TGTGTGTGTGG	T	903.97	PASS	AB=0.985;AC=10;AF=0.179;AN=56;BaseQRankSum=7.930;DP=620;FS=13.807;HRun=0;HaplotypeScore=207.9673;InbreedingCoeff=0.2047;MQ=61.22;MQ0=21;MQRankSum=-4.779;QD=5.91;ReadPosRankSum=-1.418;VQSLOD=1.5007;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:18:7.32:109,7,0	0/0:12,0:12:30.57:0,31,1279	0/1:18,0:8:1.85:2,0,213	0/0:18,0:13:9.99:0,10,333	0/0:17,0:17:48.14:0,48,1680	0/0:39,0:39:90.29:0,90,3492	0/0:15,0:15:32.99:0,33,1155	1/1:11,2:13:0.55:196,1,0	0/1:25,1:26:99:358,0,165	0/0:39,0:36:92.60:0,93,3594	0/0:27,0:27:69.69:0,70,3017	0/0:19,0:19:42.13:0,42,1794	0/0:22,0:21:45.15:0,45,1738	0/0:23,0:22:59.65:0,60,2496	0/0:38,0:37:87.28:0,87,3577	0/0:15,0:15:31.67:0,32,1644	0/1:11,0:8:8.94:9,0,65	0/0:7,0:7:21.02:0,21,620	0/0:23,0:20:42.13:0,42,1342	0/0:25,0:24:60.68:0,61,2539	0/0:32,0:32:73.43:0,73,2731	0/0:25,0:25:63.21:0,63,2425	0/0:19,0:19:48.63:0,49,2048	0/0:32,0:31:69.90:0,70,3243	0/0:20,0:19:37.68:0,38,1934	0/1:21,0:20:49.91:149,0,50	0/1:35,2:33:99:181,0,121	0/1:9,0:8:7.60:35,0,8
chr10	2324225	.	TGTGTGTGG	T	880.95	PASS	AB=0.963;AC=10;AF=0.179;AN=56;BaseQRankSum=7.856;DP=614;FS=10.587;HRun=0;HaplotypeScore=185.4886;InbreedingCoeff=0.3297;MQ=60.06;MQ0=21;MQRankSum=-5.373;QD=5.95;ReadPosRankSum=-2.468;VQSLOD=1.6417;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:18:6.93:89,7,0	0/0:12,0:12:30.57:0,31,1038	0/1:16,0:6:1.84:2,0,169	0/0:17,0:12:9.11:0,9,249	0/0:16,0:16:48.13:0,48,1351	0/0:39,0:39:89.63:0,90,2801	0/0:15,0:15:32.99:0,33,939	1/1:13,0:13:12.43:192,12,0	0/1:24,1:25:99:249,0,135	0/0:40,0:37:95.39:0,95,2935	0/0:26,0:26:69.69:0,70,2501	0/0:19,0:19:45.10:0,45,1479	0/0:22,0:21:47.66:0,48,1400	0/0:24,0:23:62.47:0,62,2079	0/0:37,0:36:87.26:0,87,2924	0/0:15,0:15:31.67:0,32,1372	0/1:11,0:8:11.46:11,0,26	0/0:7,0:7:21.02:0,21,492	0/0:21,0:18:45.05:0,45,1052	0/0:24,0:23:60.66:0,61,2020	0/0:33,0:33:76.43:0,76,2231	0/0:26,0:26:55.22:0,55,1922	0/0:20,0:20:26.67:0,27,1676	0/0:33,0:32:72.87:0,73,2659	0/0:20,0:19:37.26:0,37,1549	0/1:17,3:19:10.27:211,0,10	0/1:34,2:32:54.98:226,0,55	0/1:9,0:8:2.79:45,0,3
chr10	2324227	.	TGTGTGG	T	921.04	PASS	AB=0.954;AC=12;AF=0.214;AN=56;BaseQRankSum=8.538;DP=599;FS=7.184;HRun=0;HaplotypeScore=161.0691;InbreedingCoeff=0.5468;MQ=59.21;MQ0=21;MQRankSum=-7.221;QD=6.40;ReadPosRankSum=-3.121;VQSLOD=0.8899;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:17,1:18:6.93:71,7,0	0/0:12,0:12:30.09:0,30,795	0/1:14,0:6:1.84:2,0,125	0/0:15,0:10:5.99:0,6,168	0/0:16,0:16:48.12:0,48,1021	0/0:37,0:37:75.58:0,76,2170	0/0:14,0:14:35.02:0,35,752	1/1:12,0:12:14.93:174,15,0	0/1:24,1:25:99:183,0,101	0/0:39,0:36:95.39:0,95,2292	0/0:26,0:26:69.69:0,70,1980	0/0:18,0:18:45.10:0,45,1163	0/0:21,0:20:42.61:0,43,1049	0/0:24,0:23:62.37:0,62,1643	0/0:36,0:35:90.26:0,90,2349	0/0:15,0:15:31.67:0,32,1105	0/1:11,0:8:8.80:14,0,9	0/0:7,0:7:21.01:0,21,375	0/0:21,0:18:44.99:0,45,776	0/0:24,0:23:60.65:0,61,1545	0/0:32,0:32:76.63:0,77,1735	0/0:25,0:25:53.44:0,53,1462	0/0:20,0:20:26.67:0,27,1317	0/0:33,0:32:72.81:0,73,2086	0/0:20,0:19:23.67:0,24,1170	1/1:19,1:19:12.62:268,13,0	0/1:29,6:31:5.83:302,0,6	1/1:7,2:8:1.65:62,2,0
chr10	2324249	.	TGA	T	140.80	PASS	AB=0.952;AC=14;AF=0.259;AN=54;BaseQRankSum=3.940;DP=598;FS=5.720;HRun=0;HaplotypeScore=121.1672;InbreedingCoeff=-0.1633;MQ=52.63;MQ0=12;MQRankSum=2.508;QD=0.58;ReadPosRankSum=-0.243;VQSLOD=1.8241;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:21,0:21:3.98:4,0,13	0/1:10,3:13:11.04:11,0,282	1/1:14,0:4:5.87:36,6,0	0/1:15,0:9:5.15:5,0,41	0/1:16,0:16:24.36:24,0,203	0/0:30,8:38:14.74:0,15,710	0/1:17,0:17:2.54:3,0,303	0/0:20,0:19:44.32:0,44,310	0/0:28,0:28:26.69:0,27,165	0/1:30,5:35:76.55:77,0,739	0/0:26,0:26:5.47:0,5,331	0/1:11,3:14:14.09:14,0,259	0/1:18,0:18:3.59:4,0,315	0/1:27,0:26:53.78:54,0,467	0/0:31,0:31:18.69:0,19,634	0/0:17,1:18:7.02:0,7,490	./.	0/0:9,0:8:12.92:0,13,170	0/1:13,0:12:15.47:15,0,222	0/0:24,0:25:33.75:0,34,460	0/1:28,0:28:24.84:25,0,531	0/0:26,0:27:4.73:0,5,619	0/0:26,1:26:31.10:0,31,509	0/0:34,0:33:80.86:0,81,1050	0/0:17,0:17:7.44:0,7,547	0/0:16,0:16:29.14:0,29,238	0/0:29,0:25:21.09:0,21,218	0/1:9,0:9:11.32:11,0,28
chr10	2324273	.	A	AGT	2107.45	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=3.004;DP=630;FS=9.426;HRun=0;HaplotypeScore=127.4483;InbreedingCoeff=0.9415;MQ=61.97;MQ0=12;MQRankSum=-4.972;QD=12.32;ReadPosRankSum=-4.503;VQSLOD=1.9208;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:27:1.51:16,2,0	0/0:13,0:13:26.91:0,27,327	0/0:35,0:18:18.67:0,19,402	0/0:24,0:15:31.95:0,32,349	0/0:12,0:12:30.06:0,30,366	0/0:32,0:32:69.17:0,69,900	0/0:21,0:21:57.07:0,57,632	1/1:15,27:41:96.29:825,96,0	1/1:22,0:30:62.77:513,63,0	0/0:33,0:33:93.21:0,93,1156	0/0:14,0:14:36.07:0,36,440	0/0:9,0:9:21.05:0,21,279	0/0:18,0:18:47.81:0,48,537	0/0:24,0:24:66.10:0,66,774	0/0:20,0:20:57.15:0,57,754	0/0:21,0:21:45.13:0,45,713	1/1:8,0:7:14.88:108,15,0	0/0:7,0:6:18:0,18,214	0/0:17,0:17:41.94:0,42,418	0/0:24,0:24:42.28:0,42,703	0/0:32,0:32:87.02:0,87,973	0/0:28,0:28:81.13:0,81,968	0/0:23,0:23:59.90:0,60,711	0/0:34,0:34:90.20:0,90,1174	0/0:18,0:18:54.12:0,54,682	1/1:5,15:21:43.14:440,43,0	1/1:5,24:29:23.68:296,24,0	1/1:2,9:11:8.96:96,9,0
chr10	2326729	.	C	CT	7565.90	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-12.536;DP=682;FS=11.179;HRun=2;HaplotypeScore=60.6959;InbreedingCoeff=0.9994;MQ=75.05;MQ0=0;MQRankSum=-0.751;QD=38.21;ReadPosRankSum=-0.611;VQSLOD=4.3748;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,30:31:84.28:1209,84,0	0/0:8,0:8:24.08:0,24,297	0/0:15,0:15:45.12:0,45,516	0/0:17,0:16:45.03:0,45,495	0/0:32,0:32:93.28:0,93,1140	0/0:25,0:25:69.22:0,69,855	0/0:19,0:19:51.15:0,51,619	1/1:2,32:34:93.29:1305,93,0	1/1:1,35:36:99:1469,102,0	0/0:32,0:32:93.26:0,93,1114	0/0:22,0:22:63.18:0,63,758	0/0:32,0:32:93.29:0,93,1152	0/0:22,0:22:63.19:0,63,765	0/0:24,0:24:72.23:0,72,891	0/0:28,0:28:84.25:0,84,1019	0/0:27,0:27:78.23:0,78,954	1/1:2,17:19:42.14:601,42,0	0/0:13,0:13:36.04:0,36,413	0/0:15,0:15:39.11:0,39,474	0/0:28,0:28:84.26:0,84,1041	0/0:20,0:20:60.17:0,60,730	0/0:22,0:22:66.19:0,66,796	0/0:29,0:29:87.22:0,87,1037	0/0:23,0:23:69.20:0,69,843	0/0:31,0:31:90.27:0,90,1103	1/1:2,31:33:93.30:1306,93,0	1/1:2,31:33:90.30:1288,90,0	1/1:0,12:12:27.09:389,27,0
chr10	2327205	.	TG	T	4804.12	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=12.616;DP=552;FS=1.239;HRun=1;HaplotypeScore=56.7695;InbreedingCoeff=0.9748;MQ=76.08;MQ0=0;MQRankSum=-1.655;QD=36.39;ReadPosRankSum=2.163;VQSLOD=5.0353;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,40:40:99:1425,102,0	0/0:10,0:10:30.10:0,30,478	0/0:18,0:18:54.17:0,54,812	0/0:19,0:19:51.14:0,51,788	0/0:19,0:19:54.15:0,54,812	0/0:22,0:22:66.18:0,66,985	0/0:14,0:14:42.13:0,42,648	1/1:0,20:20:57.16:747,57,0	1/1:0,18:18:45.15:629,45,0	0/0:15,0:15:45.15:0,45,719	0/0:16,0:16:45.14:0,45,690	0/0:23,0:23:69.24:0,69,1095	0/0:21,0:21:63.19:0,63,977	0/0:15,0:15:20.26:0,20,646	0/0:21,0:21:63.20:0,63,983	0/0:19,0:19:57.18:0,57,885	0/0:29,0:29:87.27:0,87,1360	0/0:18,0:18:54.18:0,54,860	0/0:13,0:13:39.12:0,39,600	0/0:18,0:18:51.14:0,51,767	0/0:35,0:35:99:0,105,1651	0/0:13,0:13:39.03:0,39,589	0/0:19,0:19:54.12:0,54,763	0/0:27,0:27:81.28:0,81,1294	0/0:16,0:16:45.14:0,45,695	1/1:1,17:18:6.21:662,6,0	1/1:0,31:31:81.27:1132,81,0	1/1:0,5:5:15.05:209,15,0
chr10	2328703	.	TC	T	5523.63	PASS	AB=0.767;AC=12;AF=0.214;AN=56;BaseQRankSum=12.125;DP=584;FS=2.576;HRun=1;HaplotypeScore=56.8445;InbreedingCoeff=0.8082;MQ=61.81;MQ0=2;MQRankSum=-0.174;QD=35.18;ReadPosRankSum=-1.858;VQSLOD=4.2384;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,29:29:78.26:1091,78,0	0/0:15,0:15:42.14:0,42,670	0/1:12,0:10:3.55:4,0,356	0/0:16,0:14:27.09:0,27,423	0/0:30,0:30:87.27:0,87,1344	0/0:14,0:14:39.13:0,39,621	0/0:17,0:17:48.14:0,48,721	1/1:0,37:37:99:1520,111,0	1/1:0,20:20:57.19:797,57,0	0/0:22,0:22:66.23:0,66,1054	0/0:28,0:27:78.25:0,78,1211	0/0:18,0:18:54.17:0,54,840	0/0:13,0:13:39.13:0,39,623	0/0:17,0:17:48.16:0,48,765	0/0:25,0:25:75.24:0,75,1173	0/0:17,0:17:51.16:0,51,792	0/0:23,0:23:69.24:0,69,1102	0/0:22,0:21:63.21:0,63,998	0/0:18,0:17:51.17:0,51,814	0/0:41,0:41:99:0,120,1917	0/0:14,0:14:39.13:0,39,625	0/0:30,0:30:87.30:0,87,1391	0/0:20,0:20:57.19:0,57,911	0/0:7,0:7:18.06:0,18,288	0/0:20,0:20:60.20:0,60,957	0/1:3,20:23:74.71:770,0,75	1/1:0,31:31:84.28:1174,84,0	1/1:0,5:5:12.04:168,12,0
chr10	2332577	.	TTG	T	115.22	PASS	AB=0.962;AC=16;AF=0.308;AN=52;BaseQRankSum=3.278;DP=483;FS=0.934;HRun=0;HaplotypeScore=68.1833;InbreedingCoeff=-0.0007;MQ=54.35;MQ0=11;MQRankSum=1.418;QD=0.56;ReadPosRankSum=0.720;VQSLOD=1.5085;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:2.98:0,3,21	1/1:4,2:6:3.01:33,3,0	./.	./.	0/1:20,0:21:9.91:10,0,324	0/0:15,0:12:11.54:0,12,82	0/1:18,1:19:14.45:14,0,199	0/0:19,0:19:2.97:0,3,20	1/1:8,0:12:8.52:42,9,0	0/0:29,0:29:29.76:0,30,266	0/1:19,0:19:1.91:2,0,127	0/0:7,0:7:6.02:0,6,87	0/0:9,0:9:10.87:0,11,108	0/1:13,0:13:14.21:14,0,153	0/1:10,1:11:17.82:18,0,105	0/1:17,0:19:16.10:16,0,233	1/1:13,0:16:5.68:28,6,0	0/1:17,2:19:56.85:57,0,190	0/1:12,0:11:1.90:2,0,98	0/0:25,0:25:23.78:0,24,289	0/0:23,0:22:20.92:0,21,264	0/0:17,0:17:26.75:0,27,272	0/1:16,1:17:15.52:16,0,201	0/1:18,1:19:11.58:12,0,192	0/0:16,0:16:14.05:0,14,169	0/0:13,0:12:19.55:0,20,185	0/0:17,0:14:11.16:0,11,81	0/0:11,0:11:5.97:0,6,45
chr10	2335041	.	A	AT	4011.46	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-1.857;DP=559;FS=6.667;HRun=8;HaplotypeScore=58.3036;InbreedingCoeff=0.9919;MQ=70.10;MQ0=0;MQRankSum=0.210;QD=24.92;ReadPosRankSum=-0.559;VQSLOD=4.1745;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,26:32:78.20:886,78,0	0/0:10,0:10:30:0,30,269	0/0:28,0:21:38.98:0,39,344	0/0:17,0:16:29.34:0,29,237	0/0:28,0:28:69.01:0,69,623	0/0:17,1:18:13.41:0,13,377	0/0:20,0:20:44.92:0,45,394	1/1:3,26:29:78.21:881,78,0	1/1:2,1:24:56.98:309,57,0	0/0:20,0:20:57.03:0,57,519	0/0:26,0:26:75.02:0,75,679	0/0:15,0:15:33:0,33,302	0/0:17,0:17:41.96:0,42,368	0/0:18,0:18:48.02:0,48,439	0/0:13,0:13:36.02:0,36,330	0/0:17,0:17:27.42:0,27,343	1/1:4,20:24:51.15:588,51,0	0/0:20,0:20:53.96:0,54,484	0/0:25,0:25:59.86:0,60,567	0/0:15,0:15:42.01:0,42,379	0/0:12,0:11:30.02:0,30,275	0/0:27,0:27:66.02:0,66,604	0/0:24,0:24:66.01:0,66,597	0/0:6,0:6:17.98:0,18,156	0/0:21,0:20:54.02:0,54,494	1/1:1,17:18:23.68:526,24,0	1/1:4,19:23:54.16:623,54,0	1/1:3,8:11:18.04:197,18,0
chr10	2335430	.	A	AT	915.16	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-5.469;DP=553;FS=2.759;HRun=2;HaplotypeScore=56.7098;InbreedingCoeff=0.9818;MQ=64.60;MQ0=1;MQRankSum=0.291;QD=31.56;ReadPosRankSum=2.979;VQSLOD=3.3950;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:81.24:0,81,988	0/0:11,0:11:33.10:0,33,409	0/0:25,0:22:63.06:0,63,750	0/0:19,0:18:45.11:0,45,535	0/0:26,0:26:78.23:0,78,954	0/0:17,0:17:51.08:0,51,588	0/0:18,0:18:51.13:0,51,606	0/0:24,0:24:66.21:0,66,818	0/0:26,0:26:72.19:0,72,857	0/0:18,0:18:51.16:0,51,632	0/0:21,0:21:63.20:0,63,781	0/0:11,0:11:33.10:0,33,409	0/0:24,0:24:72.23:0,72,892	0/0:23,0:23:66.21:0,66,818	0/0:22,0:22:66.21:0,66,818	0/0:16,0:16:45.12:0,45,534	1/1:1,28:29:72.16:1010,72,0	0/0:16,0:16:45.10:0,45,540	0/0:25,0:25:69.20:0,69,833	0/0:18,0:18:51.15:0,51,620	0/0:26,0:26:72.23:0,72,892	0/0:13,0:13:39.11:0,39,473	0/0:24,0:24:69.22:0,69,855	0/0:10,0:10:23.87:0,24,295	0/0:21,0:21:63.07:0,63,729	0/0:13,0:13:39.12:0,39,484	0/0:23,0:23:69.22:0,69,855	0/0:5,0:5:15.05:0,15,186
chr10	2336421	.	TTA	T	2724.55	PASS	AB=0.794;AC=12;AF=0.222;AN=54;BaseQRankSum=11.488;DP=563;FS=3.529;HRun=0;HaplotypeScore=63.1180;InbreedingCoeff=0.7531;MQ=52.43;MQ0=11;MQRankSum=-8.963;QD=18.79;ReadPosRankSum=0.096;VQSLOD=3.0475;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,15:18:33.05:405,33,0	0/0:14,0:14:39.13:0,39,663	0/0:17,0:2:6.02:0,6,102	./.	0/0:36,0:36:99:0,105,1779	0/0:27,0:27:75.26:0,75,1260	0/1:12,1:13:8.92:9,0,375	0/1:14,15:20:99:336,0,159	1/1:2,15:16:33.11:429,33,0	0/0:30,1:31:48.29:0,48,1313	0/0:30,0:30:78.27:0,78,1326	0/0:12,0:12:33.11:0,33,555	0/0:20,0:20:51.17:0,51,853	0/0:13,0:13:39.13:0,39,663	0/0:12,0:12:33.07:0,33,530	0/0:13,0:13:33.09:0,33,510	0/0:24,0:24:66.21:0,66,1084	0/0:16,1:18:5.56:0,6,648	0/0:14,0:10:30.09:0,30,485	0/0:36,0:36:99:0,102,1670	0/0:12,0:12:33.11:0,33,561	0/0:19,0:19:51.15:0,51,808	0/0:21,0:21:51.14:0,51,814	0/0:10,0:10:30.07:0,30,457	0/0:22,0:22:66.23:0,66,1120	1/1:1,17:17:51.12:644,51,0	1/1:5,27:31:15.30:768,15,0	1/1:4,13:16:24.08:312,24,0
chr10	2337112	.	C	CT	569.95	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=-3.699;DP=597;FS=4.883;HRun=9;HaplotypeScore=57.3493;InbreedingCoeff=0.6711;MQ=70.58;MQ0=1;MQRankSum=-0.808;QD=16.28;ReadPosRankSum=-0.148;VQSLOD=3.6304;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:41.99:0,42,365	0/0:6,0:7:14.02:0,14,110	0/0:18,0:17:12.34:0,12,235	0/1:10,0:7:5.63:6,0,20	0/0:35,1:36:53.77:0,54,696	0/0:24,0:24:65.98:0,66,573	0/0:22,0:22:48.87:0,49,419	0/0:38,0:38:80.96:0,81,703	0/0:21,0:21:62.94:0,63,536	0/0:33,0:33:71.96:0,72,625	0/0:23,1:24:32.80:0,33,514	0/0:23,0:23:41.60:0,42,522	0/0:17,0:17:44.98:0,45,387	0/0:16,0:16:44.97:0,45,386	0/0:10,0:10:23.98:0,24,208	0/0:13,0:12:32.99:0,33,286	1/1:3,22:25:60.16:664,60,0	0/0:7,0:7:14.99:0,15,130	0/0:27,0:27:62.96:0,63,544	0/0:41,0:41:99:0,111,963	0/0:9,0:8:24:0,24,208	0/0:25,0:25:59.98:0,60,521	0/0:25,0:25:65.98:0,66,573	0/0:15,0:15:41.99:0,42,365	0/0:20,0:20:50.98:0,51,442	0/0:33,1:35:64.82:0,65,777	0/0:25,0:26:71.02:0,71,605	0/0:14,0:14:35.99:0,36,312
chr10	2337848	.	CTG	C	608.74	PASS	AB=0.883;AC=24;AF=0.480;AN=50;BaseQRankSum=4.366;DP=494;FS=14.826;HRun=0;HaplotypeScore=66.7709;InbreedingCoeff=0.3591;MQ=73.28;MQ0=18;MQRankSum=-0.202;QD=2.48;ReadPosRankSum=2.593;VQSLOD=-0.1224;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:27,6:33:8.63:78,9,0	0/0:9,0:9:9.03:0,9,132	./.	./.	1/1:20,2:21:3.48:33,3,0	0/1:13,0:13:13.91:47,0,14	0/1:12,2:14:20.92:21,0,78	0/0:16,0:15:0:0,0,0	1/1:9,0:16:14.20:70,14,0	0/0:18,0:16:9.03:0,9,131	0/0:10,0:10:3.01:0,3,44	0/1:11,4:14:27.21:113,0,27	0/1:11,2:13:11.06:55,0,11	1/1:7,2:9:6.01:64,6,0	1/1:15,0:18:5.68:28,6,0	0/0:12,0:12:3.01:0,3,44	1/1:18,0:22:8.52:42,9,0	0/0:13,0:12:12.48:0,12,152	./.	0/0:19,0:19:6.02:0,6,86	1/1:18,4:21:6.02:64,6,0	0/0:17,0:17:8.68:0,9,110	0/0:18,0:17:9.03:0,9,117	0/0:23,0:23:6:0,6,68	0/0:14,0:14:3.01:0,3,44	1/1:20,0:20:3:25,3,0	1/1:15,5:20:8.98:96,9,0	1/1:7,0:8:4.95:35,5,0
chr10	2339369	.	A	AT	7220.69	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-13.801;DP=701;FS=2.356;HRun=0;HaplotypeScore=63.5466;InbreedingCoeff=0.9992;MQ=86.10;MQ0=0;MQRankSum=-6.578;QD=42.98;ReadPosRankSum=0.736;VQSLOD=5.4401;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,36:36:96.33:1534,96,0	0/0:16,0:16:48.16:0,48,671	0/0:25,0:25:72.23:0,72,989	0/0:22,0:22:63.17:0,63,843	0/0:26,0:26:78.25:0,78,1074	0/0:33,0:33:99:0,99,1368	0/0:27,0:27:81.24:0,81,1096	1/1:1,36:37:99:1631,105,0	1/1:0,29:29:78.27:1247,78,0	0/0:19,0:19:54.18:0,54,755	0/0:21,0:21:60.19:0,60,839	0/0:22,0:22:66.22:0,66,923	0/0:29,0:29:84.28:0,84,1173	0/0:26,0:26:75.23:0,75,1027	0/0:32,0:32:96.30:0,96,1323	0/0:20,0:20:60.20:0,60,839	0/0:24,0:24:72.24:0,72,1003	0/0:15,0:15:45.15:0,45,629	0/0:20,0:20:54.16:0,54,724	0/0:22,0:22:63.20:0,63,859	0/0:32,0:32:96.32:0,96,1340	0/0:25,0:25:75.25:0,75,1049	0/0:19,0:19:51.16:0,51,696	0/0:23,0:23:69.23:0,69,964	0/0:35,0:35:99:0,102,1407	1/1:2,27:29:42.28:1227,42,0	1/1:1,26:27:78.27:1246,78,0	1/1:0,10:10:21.07:336,21,0
chr10	2339873	.	GGT	G	81.68	PASS	AB=0.935;AC=8;AF=0.154;AN=52;BaseQRankSum=4.902;DP=598;FS=1.898;HRun=0;HaplotypeScore=106.1250;InbreedingCoeff=-0.0603;MQ=66.13;MQ0=18;MQRankSum=1.739;QD=0.56;ReadPosRankSum=1.058;VQSLOD=2.0715;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:20:5.12:0,5,23	0/0:10,0:10:14.94:0,15,171	./.	./.	0/0:16,0:18:12.02:0,12,133	0/0:20,0:19:15:0,15,162	0/0:23,0:23:24.77:0,25,273	0/0:28,0:23:7.23:0,7,52	1/1:10,0:12:2.84:14,3,0	0/0:28,0:26:23.86:0,24,264	0/0:16,0:16:8.98:0,9,106	0/0:26,0:26:13.26:0,13,143	0/1:15,1:16:12.71:13,0,197	0/0:14,0:14:8.41:0,8,219	0/1:23,1:24:36.76:37,0,153	0/0:23,0:21:11.53:0,12,173	0/1:20,0:24:30.21:42,0,30	0/0:14,0:13:24.04:0,24,326	0/0:22,0:21:9.24:0,9,140	0/0:16,0:16:0.64:0,1,201	0/0:49,0:49:11.89:0,12,430	0/0:22,1:23:12.01:0,12,136	0/1:17,1:18:17.70:18,0,83	0/1:26,3:29:70.82:71,0,213	0/0:15,0:15:2.82:0,3,82	0/1:21,0:21:11.75:12,0,115	0/0:11,0:11:9.03:0,9,134	0/0:11,0:11:12.01:0,12,147
chr10	2339932	.	GTGTGTGTGTA	G	221.04	PASS	AB=0.780;AC=4;AF=0.071;AN=56;BaseQRankSum=5.522;DP=656;FS=11.446;HRun=0;HaplotypeScore=163.1076;InbreedingCoeff=0.4517;MQ=45.58;MQ0=45;MQRankSum=-3.713;QD=3.51;ReadPosRankSum=1.588;VQSLOD=2.3459;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:30:2.75:0,3,22	0/0:10,0:10:21.06:0,21,697	0/0:20,0:5:15.02:0,15,369	0/0:33,0:6:14.94:0,15,232	0/0:20,0:20:24.07:0,24,689	0/0:14,0:13:24.07:0,24,717	0/0:34,0:33:46.36:0,46,1037	0/0:25,0:17:29.90:0,30,262	0/1:5,18:21:0:0,0,0	0/0:32,0:26:63.16:0,63,1599	0/0:10,0:10:14.77:0,15,476	0/0:23,0:22:33.39:0,33,725	0/0:29,0:27:48.07:0,48,1262	0/0:14,0:13:21.02:0,21,327	0/0:34,0:34:47.44:0,47,1267	0/0:19,0:18:27.53:0,28,758	0/0:19,0:19:30.45:0,30,761	0/0:19,0:17:27.09:0,27,843	0/0:21,0:18:36.11:0,36,981	0/0:21,0:20:39.13:0,39,1200	0/0:63,0:57:99:0,114,3049	0/0:21,0:20:21.05:0,21,464	0/0:24,0:24:26.56:0,27,626	0/0:28,0:27:48.12:0,48,1507	0/0:22,0:21:27.51:0,28,820	0/1:28,0:26:99:283,0,137	1/1:12,0:12:1.91:27,2,0	0/0:6,0:4:0:0,0,0
chr10	2339944	.	GTGTGTGTA	G	1264.75	PASS	AB=1.000;AC=9;AF=0.167;AN=54;BaseQRankSum=5.810;DP=668;FS=18.825;HRun=0;HaplotypeScore=144.2746;InbreedingCoeff=0.7947;MQ=46.21;MQ0=39;MQRankSum=-3.221;QD=11.00;ReadPosRankSum=0.219;VQSLOD=1.6986;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:3,21:23:2.98:23,3,0	0/0:7,0:7:18.06:0,18,718	0/0:15,0:5:14.82:0,15,243	0/0:24,0:5:9.49:0,9,155	0/0:20,0:20:27.49:0,27,802	0/0:21,0:20:39.12:0,39,1100	0/0:34,0:33:55.33:0,55,1159	1/1:25,0:14:6.32:106,6,0	0/1:24,0:22:0:0,0,0	0/0:36,0:29:66.96:0,67,2056	0/0:12,0:12:14.70:0,15,323	0/0:27,0:26:39.33:0,39,1109	0/0:27,0:26:51:0,51,1158	0/0:13,0:12:17.99:0,18,332	0/0:34,0:34:54:0,54,1343	0/0:21,0:20:30.09:0,30,973	0/0:21,0:21:28.42:0,28,806	0/0:19,0:19:36.01:0,36,1054	0/0:22,0:18:42.11:0,42,1235	0/0:23,0:23:51.14:0,51,1525	0/0:68,0:62:99:0,129,3776	0/0:21,0:20:23.98:0,24,519	0/0:28,0:28:32.97:0,33,860	0/0:30,0:29:45.15:0,45,1663	0/0:25,0:24:42.09:0,42,1182	1/1:5,25:28:37.57:1187,38,0	1/1:2,10:12:2.18:80,2,0	./.
chr10	2340008	.	GTA	G	407.44	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=5.494;DP=695;FS=0.000;HRun=0;HaplotypeScore=109.0156;InbreedingCoeff=0.5242;MQ=42.43;MQ0=21;MQRankSum=-4.247;QD=7.84;ReadPosRankSum=-1.081;VQSLOD=3.0077;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:16:6.02:0,6,91	0/0:7,0:7:11.97:0,12,136	0/0:32,0:6:15.04:0,15,238	0/0:32,0:9:21.05:0,21,300	0/0:28,0:28:33.10:0,33,553	0/0:20,0:20:27.08:0,27,449	0/0:24,0:24:44.68:0,45,761	0/1:30,0:20:54.86:55,0,257	0/0:21,0:19:12.04:0,12,213	0/0:41,0:42:99:0,105,1861	0/0:19,0:19:12.03:0,12,213	0/0:32,0:32:39.13:0,39,690	0/0:24,0:23:26.93:0,27,402	0/0:16,0:16:21.06:0,21,343	0/0:37,0:37:42.11:0,42,681	0/0:30,0:29:41.99:0,42,688	1/1:4,18:22:35.23:458,35,0	0/0:17,0:17:48.16:0,48,847	0/0:22,0:19:37.97:0,38,835	0/0:24,0:23:57.12:0,57,877	0/0:55,0:51:84.15:0,84,1295	0/0:23,0:23:15.03:0,15,238	0/0:26,0:26:30.08:0,30,496	0/0:24,0:23:30.07:0,30,471	0/0:25,0:25:27.04:0,27,444	0/0:26,0:25:53.51:0,54,869	0/0:16,0:15:15.05:0,15,265	0/0:4,0:4:9.03:0,9,159
chr10	2340034	.	ATG	A	297	PASS	AB=0.905;AC=9;AF=0.161;AN=56;BaseQRankSum=5.995;DP=545;FS=20.139;HRun=0;HaplotypeScore=77.0804;InbreedingCoeff=0.7068;MQ=41.06;MQ0=21;MQRankSum=-0.077;QD=4.37;ReadPosRankSum=1.277;VQSLOD=0.2665;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:10:2.98:22,3,0	0/0:4,0:4:6.02:0,6,115	0/0:26,0:9:26.96:0,27,422	0/0:20,0:8:15.87:0,16,288	0/0:25,0:25:30.10:0,30,569	0/0:15,0:15:21.03:0,21,282	0/0:26,0:24:41.99:0,42,698	0/0:19,0:6:2.68:0,3,11	0/0:16,0:15:12.04:0,12,203	0/0:36,0:34:98.78:0,99,1645	0/0:15,0:15:12.04:0,12,232	0/0:25,1:26:24.01:0,24,382	0/0:19,0:18:18.11:0,18,332	0/0:16,0:15:18.04:0,18,330	0/0:34,2:34:34:0,34,608	0/0:23,0:21:33.11:0,33,623	0/0:16,0:16:27.09:0,27,489	0/0:15,0:15:45.03:0,45,735	0/1:17,2:14:14.16:14,0,460	0/0:16,0:16:41.46:0,41,704	0/0:34,0:32:48.16:0,48,915	0/0:15,0:15:9.03:0,9,164	0/0:19,0:19:24.07:0,24,426	0/0:19,0:18:21.02:0,21,312	0/0:20,0:20:21.07:0,21,367	1/1:20,0:19:28.09:215,28,0	1/1:15,0:14:14.97:126,15,0	1/1:3,0:3:8.96:68,9,0
chr10	2340036	.	GTA	G	847.48	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=6.354;DP=529;FS=10.300;HRun=0;HaplotypeScore=73.0239;InbreedingCoeff=0.7335;MQ=40.88;MQ0=19;MQRankSum=-2.303;QD=9.97;ReadPosRankSum=-0.461;VQSLOD=1.8574;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,8:10:5.93:63,6,0	0/0:4,0:4:6.02:0,6,115	0/0:25,0:9:24.07:0,24,410	0/0:18,0:8:14.14:0,14,266	0/0:25,0:25:30.09:0,30,544	0/0:12,0:12:12:0,12,162	0/0:25,0:23:35.88:0,36,566	1/1:19,0:6:1.55:4,2,0	0/0:16,0:15:12:0,12,107	0/0:35,0:33:69.88:0,70,1486	0/0:15,0:15:12.04:0,12,232	0/0:24,0:24:18.05:0,18,314	0/0:20,0:19:18.53:0,19,314	0/0:16,0:15:18.01:0,18,289	0/0:35,1:34:33.54:0,34,527	0/0:23,0:21:32.83:0,33,582	0/0:15,0:15:27.05:0,27,477	0/0:15,0:15:42.03:0,42,668	0/1:17,0:13:30.91:31,0,411	0/0:16,0:16:32.58:0,33,641	0/0:34,0:32:48.15:0,48,865	0/0:14,0:14:9.02:0,9,141	0/0:18,0:18:21.07:0,21,388	0/0:18,0:17:17.91:0,18,231	0/0:20,0:20:20.98:0,21,270	1/1:11,9:19:41.93:536,42,0	1/1:8,7:14:16.30:231,16,0	1/1:0,3:3:9.03:138,9,0
chr10	2343024	.	C	CGT	49.85	PASS	AB=0.964;AC=7;AF=0.159;AN=44;BaseQRankSum=4.003;DP=287;FS=2.362;HRun=0;HaplotypeScore=63.9951;InbreedingCoeff=0.0916;MQ=31.30;MQ0=8;MQRankSum=-3.692;QD=0.68;ReadPosRankSum=-1.468;VQSLOD=1.3376;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/1:4,0:4:0.16:0,0,0	./.	./.	0/0:8,1:9:2.37:0,2,8	0/0:8,0:8:2.99:0,3,24	0/0:17,1:16:7.55:0,8,85	1/1:6,0:6:0.50:35,0,0	./.	0/1:31,3:32:90.81:91,0,381	./.	0/0:19,0:15:7.84:0,8,71	0/1:10,0:10:1.69:2,0,35	0/0:17,1:17:3.86:0,4,27	0/1:8,1:5:0.02:0,0,0	0/0:6,0:5:2.73:0,3,38	0/0:7,0:7:14.89:0,15,140	0/0:8,0:7:8.98:0,9,92	0/0:5,0:2:5.99:0,6,58	0/0:6,0:6:6:0,6,58	0/0:37,0:28:14.35:0,14,126	0/0:14,0:14:3.90:0,4,40	./.	0/0:25,1:23:8.97:0,9,81	0/0:9,0:7:0.47:0,0,1	0/1:10,0:8:13.14:13,0,65	0/0:2,0:2:3.01:0,3,35	0/0:1,0:1:2.97:0,3,20
chr10	2343032	.	TGC	T	71.30	PASS	AB=0.978;AC=11;AF=0.220;AN=50;BaseQRankSum=5.057;DP=367;FS=9.170;HRun=0;HaplotypeScore=68.7947;InbreedingCoeff=0.0421;MQ=32.24;MQ0=8;MQRankSum=-4.793;QD=0.56;ReadPosRankSum=-1.554;VQSLOD=0.2159;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	1/1:5,0:5:0.58:1,1,0	0/1:2,0:1:0:0,0,0	./.	0/0:12,0:12:3.90:0,4,60	0/0:10,0:10:11.98:0,12,149	0/0:23,0:20:20.09:0,20,259	0/1:8,0:8:0.86:1,0,86	0/0:2,0:2:0:0,0,0	0/1:42,2:42:79.86:80,0,728	0/1:10,0:11:0:0,0,0	0/0:22,0:18:14.94:0,15,223	0/0:12,0:12:2.86:0,3,59	0/1:19,0:18:1.26:1,0,56	0/1:9,1:6:0.02:0,0,0	0/0:6,0:5:2.03:0,2,56	0/1:8,0:8:20.07:20,0,172	0/0:10,0:8:23.85:0,24,321	0/0:11,0:6:17.96:0,18,227	0/0:7,0:7:5.85:0,6,68	0/0:47,0:37:27.01:0,27,364	0/0:15,1:16:6.02:0,6,116	./.	0/0:32,0:29:20.85:0,21,271	0/0:11,1:10:6.01:0,6,74	0/1:14,1:12:45.56:46,0,114	0/1:5,0:5:23.38:23,0,47	0/0:3,0:2:3.01:0,3,51
chr10	2343038	.	TGC	T	196.09	PASS	AB=0.942;AC=9;AF=0.173;AN=52;BaseQRankSum=5.101;DP=434;FS=11.231;HRun=0;HaplotypeScore=79.8301;InbreedingCoeff=0.0229;MQ=34.94;MQ0=13;MQRankSum=-4.232;QD=1.69;ReadPosRankSum=-1.629;VQSLOD=0.5874;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	1/1:6,0:6:0.58:1,1,0	0/0:8,0:4:6.73:0,7,56	./.	0/0:14,0:14:4.83:0,5,63	0/0:14,0:13:12.77:0,13,225	0/0:24,0:21:20.26:0,20,377	0/1:8,0:8:38.73:39,0,106	0/0:2,0:2:0:0,0,0	0/1:43,3:43:83.94:84,0,777	0/1:12,2:14:0:0,0,0	0/0:23,1:20:17.97:0,18,338	0/0:9,2:11:3.21:0,3,53	0/0:21,0:20:4.07:0,4,133	0/1:9,0:6:0.18:0,0,0	0/1:6,1:6:4.46:4,0,52	0/0:9,0:9:0.53:0,1,88	0/0:12,0:10:27.09:0,27,482	0/0:12,0:7:21.02:0,21,347	0/0:7,0:7:6.02:0,6,103	0/0:61,0:48:50.16:0,50,747	0/0:18,1:19:9.03:0,9,171	0/0:9,0:8:3.01:0,3,55	0/0:35,1:33:29.93:0,30,520	0/0:15,1:13:9.03:0,9,171	0/1:17,2:15:49.34:150,0,49	0/1:6,0:6:22.56:23,0,47	0/0:4,0:3:3:0,3,26
chr10	2343040	.	CGTGTGTGT	C	182.36	PASS	AB=0.976;AC=6;AF=0.111;AN=54;BaseQRankSum=4.194;DP=460;FS=4.355;HRun=0;HaplotypeScore=105.6547;InbreedingCoeff=0.1796;MQ=36.78;MQ0=16;MQRankSum=-3.736;QD=2.37;ReadPosRankSum=-0.585;VQSLOD=1.8903;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	1/1:6,0:6:0.68:1,1,0	0/0:13,0:6:18:0,18,218	0/0:10,0:2:2.97:0,3,20	0/0:14,0:14:4.26:0,4,136	0/0:14,0:13:12.73:0,13,416	0/0:26,0:23:23.75:0,24,725	0/1:8,0:8:11.18:11,0,198	0/1:2,0:2:0:0,0,0	0/1:42,4:44:99:253,0,1465	0/1:13,0:14:0:0,0,0	0/0:24,0:21:23.74:0,24,681	0/0:12,0:12:2.10:0,2,156	0/0:22,0:21:4.73:0,5,302	0/0:11,0:7:0:0,0,1	0/0:7,0:6:5.75:0,6,145	0/0:9,0:9:7.28:0,7,421	0/0:11,0:10:27.06:0,27,860	0/0:15,0:10:30.10:0,30,626	0/0:6,0:7:6.02:0,6,262	0/0:66,0:52:57.73:0,58,1632	0/0:17,0:19:9.03:0,9,357	0/0:10,0:9:6.02:0,6,164	0/0:36,0:33:30.48:0,30,929	0/0:15,1:13:8.55:0,9,306	0/0:21,0:17:23.77:0,24,467	0/0:6,0:6:11.45:0,11,71	0/0:4,0:3:3.01:0,3,34
chr10	2343066	.	TGC	T	333.06	PASS	AB=0.971;AC=12;AF=0.222;AN=54;BaseQRankSum=6.877;DP=602;FS=22.099;HRun=0;HaplotypeScore=106.8546;InbreedingCoeff=0.0854;MQ=46.76;MQ0=23;MQRankSum=-7.175;QD=2.50;ReadPosRankSum=-3.071;VQSLOD=-0.0911;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	1/1:6,2:8:2.13:6,2,0	0/0:51,2:15:45.14:0,45,724	0/0:48,2:5:12.02:0,12,187	0/0:15,2:17:3.01:0,3,58	0/0:15,2:16:21.80:0,22,400	0/0:28,2:28:38.60:0,39,726	0/1:6,0:6:27.58:28,0,33	1/1:4,2:6:8.84:107,9,0	0/1:45,2:44:99:213,0,420	0/0:14,2:16:5.84:0,6,116	0/0:21,5:23:20:0,20,554	0/1:10,3:13:42.47:82,0,42	0/0:23,3:26:18.81:0,19,461	0/0:14,1:12:14.84:0,15,280	0/1:7,0:7:4.05:4,0,162	0/0:13,0:13:19.30:0,19,341	0/0:17,0:16:47.94:0,48,805	0/1:17,0:14:5.83:6,0,358	0/0:10,0:9:6.02:0,6,109	0/0:78,0:67:99:0,101,1806	0/0:18,1:19:16.30:0,16,293	0/0:12,2:13:9.03:0,9,173	0/0:40,0:38:41.77:0,42,737	0/0:13,3:14:14.97:0,15,287	0/1:17,0:15:7.63:8,0,195	0/1:7,0:7:6.71:7,0,28	0/1:5,0:4:4.79:9,0,5
chr10	2343076	.	TGTGCGCAC	T	545.45	PASS	AB=0.995;AC=13;AF=0.241;AN=54;BaseQRankSum=8.886;DP=614;FS=6.558;HRun=0;HaplotypeScore=132.2895;InbreedingCoeff=0.3748;MQ=47.46;MQ0=34;MQRankSum=-8.431;QD=5.10;ReadPosRankSum=-1.244;VQSLOD=2.0296;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	1/1:7,0:7:0.03:1,0,0	0/0:67,0:15:44.89:0,45,887	0/0:59,0:6:15.05:0,15,369	0/0:16,0:16:2.19:0,2,130	0/0:18,0:16:24.35:0,24,874	0/0:33,0:30:46.88:0,47,1692	0/1:3,0:2:0:0,0,0	1/1:6,0:6:6.73:47,7,0	0/1:42,1:39:99:408,0,736	0/0:15,2:17:5.75:0,6,266	0/0:24,0:21:27.82:0,28,1209	0/1:16,0:15:22.21:22,0,315	0/0:26,0:25:2.84:0,3,1158	0/0:17,0:14:23.52:0,24,1023	0/0:8,0:8:6.37:0,6,394	0/1:11,0:11:12.91:13,0,457	0/0:20,0:19:57.01:0,57,2028	0/0:16,0:10:18.05:0,18,652	0/0:9,0:8:9.03:0,9,368	0/0:74,0:67:99:0,123,4887	0/0:18,0:17:18.06:0,18,765	0/0:14,0:13:15.05:0,15,607	0/0:45,0:42:57.30:0,57,2286	0/0:18,1:17:14.14:0,14,599	0/1:11,0:9:4.63:5,0,86	1/1:6,0:6:11.71:101,12,0	1/1:4,0:3:8.89:90,9,0
chr10	2343077	.	GTGCGCA	G	416.32	PASS	AB=0.976;AC=10;AF=0.185;AN=54;BaseQRankSum=7.449;DP=608;FS=6.651;HRun=0;HaplotypeScore=120.8754;InbreedingCoeff=0.1456;MQ=47.76;MQ0=33;MQRankSum=-6.177;QD=3.68;ReadPosRankSum=-0.870;VQSLOD=1.6321;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	1/1:7,0:7:1.03:13,1,0	0/0:68,0:15:45.08:0,45,987	0/0:59,0:6:15.05:0,15,360	0/0:16,0:16:3.01:0,3,112	0/0:18,0:16:24.67:0,25,775	0/0:33,0:30:47.26:0,47,1550	0/0:3,0:2:4.96:0,5,23	0/1:6,0:6:4.90:5,0,28	0/1:41,0:37:99:277,0,958	0/0:16,1:17:5.91:0,6,226	0/0:25,0:22:27.96:0,28,1082	0/1:15,0:14:23.96:24,0,282	0/1:26,0:25:0.39:0,0,956	0/0:17,0:14:24:0,24,826	0/1:8,0:8:13.61:14,0,327	0/0:11,0:11:19.18:0,19,525	0/0:20,0:19:56:0,56,1726	0/0:14,0:8:24.03:0,24,628	0/0:9,0:8:9.03:0,9,304	0/0:73,0:67:99:0,125,4244	0/0:18,0:17:18.06:0,18,643	0/0:14,0:13:15.05:0,15,491	0/0:44,0:41:57.17:0,57,1873	0/0:19,0:17:14.88:0,15,535	0/0:10,0:8:5.74:0,6,142	0/1:5,1:6:11.21:63,0,11	1/1:2,2:3:9.02:150,9,0
chr10	2343078	.	TGC	T	79.32	PASS	AB=0.984;AC=7;AF=0.135;AN=52;BaseQRankSum=7.440;DP=603;FS=6.653;HRun=0;HaplotypeScore=100.1889;InbreedingCoeff=0.3883;MQ=47.94;MQ0=34;MQRankSum=-6.519;QD=1.28;ReadPosRankSum=0.197;VQSLOD=1.2884;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	1/1:5,2:7:3.01:39,3,0	0/0:68,0:15:39.91:0,40,436	0/0:61,0:6:13.79:0,14,128	0/0:13,2:16:3.01:0,3,56	0/0:18,0:16:23.62:0,24,374	0/0:30,1:29:47.62:0,48,769	./.	0/1:4,0:6:0.34:5,0,0	0/1:37,0:35:97.75:98,0,428	0/0:17,1:18:8.83:0,9,137	0/0:25,0:22:32.77:0,33,563	0/0:14,0:13:2.56:0,3,96	0/0:26,0:25:20.69:0,21,495	0/0:14,0:12:24.06:0,24,403	0/0:9,0:9:4.21:0,4,183	0/0:11,0:11:9.03:0,9,253	0/0:20,0:19:57.17:0,57,943	0/0:12,0:7:17.89:0,18,293	0/0:6,2:8:9.01:0,9,135	0/0:75,0:68:99:0,129,2171	0/0:16,1:16:18.05:0,18,301	0/0:12,2:13:15.02:0,15,218	0/0:42,1:40:57.02:0,57,919	0/0:19,1:17:14.89:0,15,276	0/0:9,0:7:8.81:0,9,77	0/1:6,0:6:7.93:16,0,8	1/1:4,0:3:7.63:39,8,0
chr10	2343079	.	GCGCA	G	257.79	PASS	AB=0.985;AC=8;AF=0.154;AN=52;BaseQRankSum=7.732;DP=583;FS=0.000;HRun=0;HaplotypeScore=109.2122;InbreedingCoeff=0.4632;MQ=48.66;MQ0=34;MQRankSum=-6.698;QD=4.60;ReadPosRankSum=-1.498;VQSLOD=2.1000;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	1/1:7,0:7:2.85:18,3,0	0/0:68,0:15:43.03:0,43,726	0/0:61,0:6:15.05:0,15,297	0/0:13,3:16:1.28:0,1,78	0/0:15,2:15:24.54:0,25,557	0/0:26,2:25:47.45:0,47,1128	./.	0/1:6,0:6:5.82:6,0,42	0/1:32,1:29:99:184,0,687	0/0:17,1:18:8.93:0,9,238	0/0:21,4:22:34.15:0,34,889	0/0:13,1:13:6.96:0,7,240	0/0:21,4:25:9.89:0,10,715	0/0:13,1:12:24.02:0,24,654	0/0:8,1:9:0.78:0,1,305	0/0:11,0:11:18.76:0,19,380	0/0:21,0:20:60.20:0,60,1440	0/0:12,0:7:21.07:0,21,529	0/0:8,0:8:9.03:0,9,236	0/0:74,0:67:99:0,129,3331	0/0:12,3:14:18.06:0,18,487	0/0:13,0:12:15.05:0,15,393	0/0:41,0:38:57.84:0,58,1511	0/0:18,2:17:14.98:0,15,386	0/0:7,1:5:8.39:0,8,95	1/1:5,1:6:10.70:80,11,0	1/1:4,0:3:8.99:98,9,0
chr10	2343080	.	CGCACGT	C	319.63	PASS	AB=0.966;AC=10;AF=0.192;AN=52;BaseQRankSum=7.941;DP=576;FS=4.102;HRun=0;HaplotypeScore=117.5850;InbreedingCoeff=0.3868;MQ=49.08;MQ0=34;MQRankSum=-6.935;QD=3.63;ReadPosRankSum=-1.331;VQSLOD=1.9082;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	1/1:7,0:7:1.03:13,1,0	0/0:68,0:15:43.03:0,43,829	0/0:61,0:6:15.05:0,15,346	0/0:15,0:15:2.26:0,2,106	0/0:16,1:15:24.62:0,25,725	0/0:28,0:25:47.53:0,48,1426	./.	0/1:6,0:6:1.33:1,0,61	0/1:29,1:27:99:259,0,962	0/0:15,2:17:8.92:0,9,327	0/0:24,0:22:30.31:0,30,1199	0/0:15,0:14:9.28:0,9,419	0/1:23,3:25:1.93:2,0,953	0/0:13,1:12:24.01:0,24,877	0/1:8,0:8:13.22:13,0,422	0/0:11,0:11:19.26:0,19,463	0/0:21,0:20:59.01:0,59,1864	0/0:12,0:7:21.07:0,21,691	0/0:6,0:7:9.03:0,9,316	0/0:70,0:63:99:0,129,4323	0/0:16,0:15:21.07:0,21,727	0/0:12,0:12:15.05:0,15,545	0/0:41,1:40:60.35:0,60,2105	0/0:19,1:17:14.91:0,15,503	0/0:8,0:4:7.42:0,7,116	1/1:5,1:6:11.64:102,12,0	1/1:4,0:3:8.45:60,8,0
chr10	2343081	.	GCA	G	299.91	PASS	AB=0.946;AC=12;AF=0.231;AN=52;BaseQRankSum=8.270;DP=568;FS=4.055;HRun=0;HaplotypeScore=93.9315;InbreedingCoeff=0.4150;MQ=49.46;MQ0=35;MQRankSum=-7.894;QD=3.53;ReadPosRankSum=1.212;VQSLOD=2.1361;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	1/1:5,1:6:3:28,3,0	0/0:68,0:15:33.09:0,33,578	0/0:61,0:6:15.05:0,15,230	0/0:14,1:15:2.93:0,3,57	0/0:15,2:15:24.76:0,25,386	0/0:27,0:24:44.99:0,45,776	./.	1/1:6,0:6:7.86:42,8,0	0/1:25,5:26:99:209,0,464	0/0:17,1:17:8.85:0,9,165	0/0:21,0:19:35.93:0,36,647	0/1:12,1:12:3.75:4,0,166	0/0:26,0:25:23.01:0,23,536	0/0:14,0:12:24.07:0,24,455	0/1:9,0:9:10.30:10,0,229	0/1:11,0:11:24.93:25,0,218	0/0:20,0:20:60.18:0,60,1027	0/0:12,0:7:21.07:0,21,359	0/0:7,0:7:9.03:0,9,164	0/0:69,1:63:99:0,131,2296	0/0:16,0:15:21.06:0,21,363	0/0:13,0:12:15.05:0,15,272	0/0:43,0:40:60.08:0,60,1060	0/0:20,0:17:14.86:0,15,264	0/0:7,0:3:1.80:0,2,64	1/1:6,0:6:8.92:46,9,0	1/1:4,0:3:8.94:84,9,0
chr10	2343106	.	TGC	T	186.38	PASS	AB=0.947;AC=10;AF=0.185;AN=54;BaseQRankSum=7.544;DP=608;FS=0.844;HRun=0;HaplotypeScore=101.7679;InbreedingCoeff=0.1513;MQ=41.11;MQ0=29;MQRankSum=-7.267;QD=1.79;ReadPosRankSum=-3.897;VQSLOD=0.8720;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:10,2:11:0:0,0,0	0/0:6,0:6:0.07:0,0,1	./.	0/0:29,1:1:3.01:0,3,58	0/0:13,0:13:15.03:0,15,253	0/0:17,0:16:0.25:0,0,376	0/0:33,1:29:42.30:0,42,775	0/1:6,0:3:7.88:15,0,8	1/1:7,0:7:2.81:30,3,0	0/1:36,0:32:72.23:72,0,536	0/0:19,1:19:16.42:0,16,293	0/0:23,0:22:48.13:0,48,821	0/0:18,0:17:25.15:0,25,320	0/0:23,3:24:20.38:0,20,665	0/0:17,0:15:36.10:0,36,628	0/0:10,0:10:5.09:0,5,331	0/1:11,3:13:89.46:161,0,89	0/0:26,0:24:52.12:0,52,1147	0/0:16,0:9:1.48:0,1,285	0/0:9,0:9:15.93:0,16,244	0/0:99,0:85:99:0,158,2756	0/0:21,0:20:26.83:0,27,467	0/0:19,0:18:21:0,21,331	0/0:52,0:47:60.68:0,61,1315	0/0:24,1:21:14.91:0,15,215	0/1:18,0:12:9.17:9,0,194	0/1:7,0:7:15.09:15,0,72	1/1:4,0:3:1.56:4,2,0
chr10	2343112	.	TGC	T	69.03	PASS	AB=0.929;AC=6;AF=0.107;AN=56;BaseQRankSum=7.050;DP=614;FS=2.337;HRun=0;HaplotypeScore=104.7328;InbreedingCoeff=-0.0230;MQ=41.91;MQ0=30;MQRankSum=-7.690;QD=0.81;ReadPosRankSum=-1.252;VQSLOD=1.7809;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:15:2.72:0,3,12	0/0:5,1:6:0.07:0,0,1	0/0:20,1:2:5.98:0,6,74	0/0:22,2:1:2.99:0,3,23	0/0:12,0:12:18.06:0,18,341	0/0:19,0:18:26.13:0,26,373	0/0:33,0:28:42.32:0,42,798	0/1:7,0:4:7.49:17,0,7	0/0:6,0:8:11.17:0,11,42	0/1:38,0:34:33.53:34,0,751	0/0:21,1:21:16.68:0,17,294	0/0:23,0:22:48.10:0,48,789	0/0:19,0:18:15.40:0,15,441	0/0:27,0:24:35.11:0,35,677	0/0:18,0:16:39.09:0,39,664	0/0:9,0:9:18.05:0,18,311	0/1:12,0:11:38.57:39,0,121	0/0:27,0:25:69.11:0,69,1183	0/0:18,0:10:15.01:0,15,374	0/0:10,0:10:15.90:0,16,243	0/0:106,0:91:99:0,177,2821	0/0:17,2:18:33.10:0,33,574	0/0:17,2:18:21.07:0,21,388	0/0:50,0:46:86.98:0,87,1528	0/0:21,1:18:15.01:0,15,283	0/1:17,1:13:54.76:55,0,63	0/1:6,1:7:32.76:33,0,57	0/1:2,1:3:12.96:13,0,14
chr10	2343114	.	C	CGT	267.91	PASS	AB=1.000;AC=11;AF=0.204;AN=54;BaseQRankSum=7.314;DP=620;FS=17.961;HRun=0;HaplotypeScore=110.9261;InbreedingCoeff=0.5428;MQ=41.81;MQ0=28;MQRankSum=-5.702;QD=3.43;ReadPosRankSum=-1.718;VQSLOD=1.2453;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:16:4.07:12,4,0	1/1:6,0:6:0.94:2,1,0	0/0:23,0:2:6.02:0,6,74	./.	0/0:12,0:12:18.06:0,18,234	0/0:19,0:18:23.61:0,24,269	0/0:33,0:28:38.58:0,39,505	0/1:6,0:4:7.90:10,0,8	1/1:8,0:8:14.75:136,15,0	0/0:38,0:34:73.82:0,74,717	0/0:23,0:22:14.95:0,15,195	0/0:23,0:22:42.08:0,42,513	0/0:19,0:18:30.23:0,30,352	0/0:29,0:26:32.53:0,33,427	0/0:17,0:16:36.08:0,36,436	0/0:9,0:9:15.02:0,15,178	1/1:11,4:14:21.70:231,22,0	0/0:29,0:27:71.99:0,72,853	0/0:18,0:10:18.18:0,18,193	0/0:9,0:9:17.92:0,18,208	0/0:101,0:87:99:0,150,1846	0/0:20,0:19:33.10:0,33,417	0/0:17,0:16:21.05:0,21,258	0/0:53,0:48:83.75:0,84,1013	0/0:20,0:18:15.05:0,15,188	0/1:19,0:15:12.29:12,0,36	0/1:7,0:7:4.57:5,0,16	0/0:3,0:3:2.92:0,3,17
chr10	2343122	.	TGC	T	227.69	PASS	AB=0.944;AC=9;AF=0.167;AN=54;BaseQRankSum=8.000;DP=616;FS=32.484;HRun=0;HaplotypeScore=110.6848;InbreedingCoeff=0.5033;MQ=42.76;MQ0=34;MQRankSum=-5.790;QD=5.06;ReadPosRankSum=-2.310;VQSLOD=1.0191;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:13,1:14:2.72:0,3,12	0/1:4,0:5:15.56:16,0,18	0/0:22,0:3:9:0,9,132	./.	0/0:16,0:16:24.05:0,24,400	0/0:17,0:16:0.26:0,0,359	0/0:36,0:33:54.04:0,54,711	1/1:6,1:6:14.68:110,15,0	0/0:9,0:9:14.27:0,14,74	0/0:39,0:34:57.43:0,57,937	0/0:21,1:22:20.75:0,21,323	0/0:23,0:22:50.88:0,51,738	0/0:20,0:19:6.80:0,7,439	0/0:26,0:23:34.44:0,34,589	0/0:20,0:17:33.10:0,33,567	0/0:8,0:8:15.01:0,15,212	0/1:12,0:11:32.84:63,0,33	0/0:29,0:27:61.47:0,61,1101	0/0:21,0:11:26.72:0,27,333	0/0:8,0:8:18.05:0,18,300	0/0:103,0:88:99:0,167,2543	0/0:17,0:17:32.07:0,32,499	0/0:19,0:18:24.07:0,24,379	0/0:52,0:48:90.14:0,90,1409	0/0:19,0:16:14.93:0,15,206	1/1:11,2:11:10.64:125,11,0	1/1:5,1:6:5.71:48,6,0	0/1:2,0:2:2.72:9,0,3
chr10	2343140	.	CGT	C	715.85	PASS	AB=0.874;AC=11;AF=0.196;AN=56;BaseQRankSum=7.305;DP=655;FS=9.972;HRun=0;HaplotypeScore=118.3752;InbreedingCoeff=0.5345;MQ=42.86;MQ0=28;MQRankSum=-4.651;QD=8.04;ReadPosRankSum=-1.962;VQSLOD=2.3167;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:16,3:19:2.74:0,3,12	0/0:6,0:6:11.37:0,11,121	0/0:41,0:9:25.32:0,25,346	0/0:38,0:7:20.80:0,21,275	0/0:15,0:15:27.09:0,27,446	0/0:16,0:15:27.08:0,27,433	0/0:33,1:32:7.47:0,7,650	1/1:5,5:10:12.75:237,13,0	0/1:12,3:15:7.43:8,0,7	0/0:43,0:39:91.88:0,92,1355	0/0:15,0:15:15.52:0,16,251	0/0:29,0:27:51.17:0,51,841	0/0:22,1:22:3.35:0,3,521	0/0:24,0:22:27.09:0,27,449	0/0:20,0:17:24.05:0,24,368	0/0:8,0:8:12.04:0,12,199	1/1:11,6:16:22.83:320,23,0	0/0:29,0:28:65.94:0,66,1003	0/0:19,0:11:30.10:0,30,462	0/0:12,0:12:30.09:0,30,458	0/0:89,0:79:99:0,108,2132	0/1:17,1:18:10.76:11,0,368	0/0:21,0:21:30.10:0,30,488	0/0:49,1:46:58.06:0,58,1409	0/0:14,0:13:11.99:0,12,196	0/1:17,4:19:13.03:203,0,13	1/1:2,3:5:5.86:52,6,0	1/1:1,2:3:3.01:37,3,0
chr10	2343142	.	T	TGC	252.74	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=6.706;DP=655;FS=0.833;HRun=0;HaplotypeScore=122.3382;InbreedingCoeff=0.4045;MQ=43.06;MQ0=26;MQRankSum=-6.183;QD=2.63;ReadPosRankSum=-3.949;VQSLOD=0.9761;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:21:4.96:29,5,0	0/0:6,0:6:7.11:0,7,95	0/0:43,0:11:33.04:0,33,422	0/0:39,0:7:21.07:0,21,293	0/0:15,0:15:27.09:0,27,411	0/0:17,0:16:33.08:0,33,456	0/0:33,0:31:53.59:0,54,725	1/1:14,0:14:5.69:132,6,0	1/1:7,8:16:1.34:117,1,0	0/0:42,0:38:97.56:0,98,1356	0/0:15,0:15:21.93:0,22,281	0/0:29,0:27:51.16:0,51,770	0/0:22,0:21:44.40:0,44,589	0/0:24,0:22:29.71:0,30,437	0/0:17,0:15:27.06:0,27,369	0/0:8,0:8:15.03:0,15,207	0/1:17,0:16:33.03:38,0,33	0/0:27,0:26:72.10:0,72,1022	0/0:20,0:12:36.04:0,36,477	0/0:12,0:12:30.10:0,30,454	0/0:85,0:75:99:0,129,2184	0/0:17,0:17:29.97:0,30,405	0/0:21,0:21:35.97:0,36,500	0/0:50,0:47:98.87:0,99,1439	0/0:14,0:13:15.04:0,15,208	0/1:21,0:19:46.08:46,0,94	0/1:7,0:7:19.69:25,0,20	0/0:3,0:3:5.33:0,5,27
chr10	2344456	.	TGCGTGTGTGTGTGTGC	T	85.48	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.137;DP=731;FS=0.000;HRun=0;HaplotypeScore=287.0621;InbreedingCoeff=0.6061;MQ=53.31;MQ0=15;MQRankSum=-2.369;QD=5.34;ReadPosRankSum=-0.715;VQSLOD=2.0124;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:8.86:0,9,166	0/0:9,0:9:18.06:0,18,591	0/0:44,0:25:47.14:0,47,911	0/0:34,0:17:39.08:0,39,832	0/0:12,0:12:21.07:0,21,886	0/0:22,0:22:51.15:0,51,2559	0/0:32,0:32:78.27:0,78,3091	0/0:18,0:16:33.11:0,33,578	0/0:18,0:18:14.04:0,14,191	0/0:48,0:45:99:0,117,4160	0/0:6,0:6:5.99:0,6,365	0/0:37,0:36:99:0,99,4229	0/0:21,0:19:54.14:0,54,2123	0/0:31,0:31:78.22:0,78,3309	0/0:24,0:24:54.19:0,54,2555	0/0:12,0:12:30.10:0,30,1213	1/1:7,9:15:6.02:166,6,0	0/0:30,0:30:81.28:0,81,3826	0/0:25,0:22:45.15:0,45,1626	0/0:18,0:18:33.09:0,33,1578	0/0:105,0:101:99:0,239,10770	0/0:17,0:16:21.07:0,21,1039	0/0:10,0:10:12.02:0,12,355	0/0:45,0:45:99:0,111,5290	0/0:17,0:17:30.10:0,30,1655	0/0:32,0:34:77.68:0,78,1098	0/0:12,0:12:5.89:0,6,128	0/0:6,0:6:9.03:0,9,152
chr10	2344458	.	C	CGTGTGT	1067.87	PASS	AB=0.600;AC=13;AF=0.232;AN=56;BaseQRankSum=8.161;DP=732;FS=35.389;HRun=0;HaplotypeScore=169.7921;InbreedingCoeff=0.8008;MQ=52.84;MQ0=15;MQRankSum=-6.808;QD=8.15;ReadPosRankSum=-3.330;VQSLOD=0.3814;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:9,17:27:0:0,0,0	0/0:8,0:8:15.04:0,15,263	0/0:49,0:25:13.37:0,13,169	0/0:36,0:17:18.97:0,19,247	0/0:12,0:12:17.92:0,18,297	0/0:21,0:21:48.16:0,48,1026	0/0:33,0:33:74.74:0,75,1312	1/1:23,0:19:6.80:118,7,0	1/1:7,0:18:11.80:136,12,0	0/0:46,0:43:68.19:0,68,1508	0/0:4,0:5:6.02:0,6,107	0/0:36,0:36:90.09:0,90,1734	0/0:21,0:19:48.11:0,48,856	0/0:30,0:30:75.15:0,75,1448	0/0:22,0:23:48.15:0,48,923	0/0:14,0:14:30.09:0,30,576	1/1:15,0:14:1.96:10,2,0	0/0:29,0:30:49.29:0,49,1369	0/0:22,0:20:39.05:0,39,609	0/0:18,0:18:27.09:0,27,571	0/0:104,0:101:99:0,234,4266	0/0:18,0:17:18.02:0,18,330	0/0:9,0:9:9.03:0,9,166	0/0:41,0:44:72.61:0,73,1802	0/0:18,0:18:9.91:0,10,568	1/1:29,3:32:32.79:744,33,0	1/1:6,5:11:5.06:108,5,0	1/1:5,0:5:5.51:109,6,0
chr10	2344462	.	T	TGC	189.63	PASS	AB=0.854;AC=5;AF=0.089;AN=56;BaseQRankSum=6.915;DP=749;FS=46.979;HRun=0;HaplotypeScore=121.6378;InbreedingCoeff=0.2238;MQ=50.34;MQ0=18;MQRankSum=-5.992;QD=3.06;ReadPosRankSum=0.268;VQSLOD=0.8124;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:11.97:0,12,99	0/0:8,0:8:21.04:0,21,270	0/0:45,0:19:40.30:0,40,512	0/0:43,0:16:44.94:0,45,517	0/0:13,0:13:27.04:0,27,342	0/0:20,0:20:54.14:0,54,779	0/0:37,0:37:96.19:0,96,1307	0/1:17,8:23:99:207,0,109	0/1:19,0:19:10.94:11,0,12	0/0:47,0:43:99:0,119,1583	0/0:5,0:5:6.44:0,6,66	0/0:39,0:38:99:0,108,1483	0/0:21,0:20:60.13:0,60,802	0/0:30,0:30:81.25:0,81,1191	0/0:22,0:22:57.09:0,57,773	0/0:16,0:16:33.09:0,33,481	0/0:15,0:14:8.23:0,8,70	0/0:31,0:31:93.06:0,93,1222	0/0:21,0:18:51.01:0,51,643	0/0:15,0:15:33.07:0,33,459	0/0:110,0:104:99:0,255,3676	0/0:20,0:19:21.06:0,21,300	0/0:9,0:9:12.02:0,12,158	0/0:43,0:43:99:0,114,1630	0/0:17,0:17:33.04:0,33,456	0/0:34,0:34:3.44:0,3,370	1/1:10,1:11:5.44:25,5,0	0/1:4,1:5:30.10:59,0,30
chr10	2344492	.	CGT	C	30.55	PASS	AB=0.841;AC=3;AF=0.056;AN=54;BaseQRankSum=6.963;DP=745;FS=18.517;HRun=0;HaplotypeScore=102.1841;InbreedingCoeff=0.1303;MQ=46.22;MQ0=43;MQRankSum=-5.010;QD=0.47;ReadPosRankSum=-0.010;VQSLOD=0.3968;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/0:8,0:8:14.94:0,15,244	0/0:57,0:5:6.02:0,6,98	0/0:55,0:10:21.07:0,21,347	0/0:17,0:16:30.10:0,30,488	0/0:19,0:18:45.15:0,45,744	0/0:34,1:35:45.25:0,45,1294	0/1:23,1:21:15.17:15,0,92	0/0:11,3:14:9.42:0,9,109	0/0:29,1:28:30.27:0,30,1048	0/0:5,0:4:9.01:0,9,120	0/0:42,0:40:93.20:0,93,1405	0/0:17,0:16:39.09:0,39,606	0/0:20,1:21:10.91:0,11,690	0/0:15,0:14:36.12:0,36,601	0/0:12,0:11:21.07:0,21,351	0/0:9,0:8:2.03:0,2,5	0/0:33,0:33:84.27:0,84,1386	0/0:21,0:18:35.28:0,35,539	0/0:9,0:9:18.06:0,18,280	0/0:142,0:129:99:0,291,4563	0/0:17,0:17:21.07:0,21,346	0/0:7,0:7:6.02:0,6,93	0/0:48,1:49:99:0,123,1981	0/0:19,0:19:36.12:0,36,605	0/1:23,5:26:42.68:69,0,43	0/0:2,3:6:0.56:0,1,17	0/1:4,3:7:1.96:43,0,2
chr10	2344498	.	T	TGC	169.49	PASS	AB=0.981;AC=5;AF=0.093;AN=54;BaseQRankSum=6.443;DP=740;FS=38.282;HRun=0;HaplotypeScore=110.2788;InbreedingCoeff=0.1970;MQ=46.31;MQ0=41;MQRankSum=-6.531;QD=2.32;ReadPosRankSum=-0.193;VQSLOD=-0.1252;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:9,0:9:17.15:0,17,243	0/0:49,0:4:11.90:0,12,128	0/0:46,0:8:21.07:0,21,315	0/0:19,0:18:30.10:0,30,449	0/0:19,0:18:51.14:0,51,736	0/0:39,0:39:96.04:0,96,1349	0/1:27,0:21:82.29:82,0,196	0/0:15,0:15:3.31:0,3,58	0/0:27,0:26:75.13:0,75,1059	0/0:6,0:5:8.99:0,9,112	0/0:39,0:37:99:0,99,1324	0/0:16,0:15:41.88:0,42,562	0/0:20,0:20:51.07:0,51,708	0/0:14,0:13:36.12:0,36,550	0/0:13,0:12:24.03:0,24,340	0/0:9,0:7:4.54:0,5,27	0/0:31,0:31:93.21:0,93,1323	0/0:21,0:15:39.36:0,39,523	0/0:9,0:9:18.06:0,18,274	0/0:150,1:137:99:0,324,4476	0/0:19,0:19:27.06:0,27,371	0/0:9,0:9:8.39:0,8,95	0/0:49,0:49:99:0,123,1819	0/0:20,0:20:39.03:0,39,575	0/1:31,2:29:99:108,0,223	0/1:6,0:6:17.60:18,0,47	1/1:6,1:7:6.14:74,6,0
chr10	2344500	.	T	TGC	256.77	PASS	AB=1.000;AC=5;AF=0.093;AN=54;BaseQRankSum=7.697;DP=737;FS=58.952;HRun=0;HaplotypeScore=109.2941;InbreedingCoeff=0.2071;MQ=46.23;MQ0=43;MQRankSum=-7.359;QD=3.57;ReadPosRankSum=-2.630;VQSLOD=-0.1090;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	0/0:10,0:10:20.17:0,20,266	0/0:47,0:3:6.02:0,6,91	0/0:45,0:7:21.07:0,21,313	0/0:19,0:18:33.10:0,33,473	0/0:18,0:17:48.15:0,48,711	0/0:39,0:39:99:0,99,1364	0/1:27,0:20:52.93:136,0,53	0/0:12,4:15:1.47:0,1,59	0/0:27,0:26:75.07:0,75,1056	0/0:6,0:5:2.05:0,2,103	0/0:42,0:39:96.17:0,96,1301	0/0:16,0:15:42.10:0,42,589	0/0:20,0:20:50.98:0,51,700	0/0:15,0:14:36.12:0,36,549	0/0:12,0:11:24.03:0,24,339	0/0:7,1:6:4.54:0,5,28	0/0:32,0:32:90.25:0,90,1302	0/0:22,0:15:39.37:0,39,525	0/0:9,0:9:18.06:0,18,273	0/0:148,1:135:99:0,322,4438	0/0:17,0:17:27.06:0,27,369	0/0:8,0:8:9.01:0,9,111	0/0:51,0:51:99:0,126,1843	0/0:19,0:19:42.07:0,42,590	0/1:32,0:29:78.04:149,0,78	0/1:5,0:6:16.74:17,0,26	1/1:6,0:7:12.69:72,13,0
chr10	2344520	.	CGT	C	35.45	PASS	AB=0.944;AC=8;AF=0.154;AN=52;BaseQRankSum=5.496;DP=653;FS=23.262;HRun=0;HaplotypeScore=92.9269;InbreedingCoeff=0.2873;MQ=46.37;MQ0=32;MQRankSum=-4.296;QD=0.42;ReadPosRankSum=-2.778;VQSLOD=-0.3096;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:10,0:10:17.95:0,18,306	./.	0/0:32,0:6:9.02:0,9,123	0/0:15,0:15:21.07:0,21,350	0/0:14,0:13:21.07:0,21,357	0/0:43,0:43:87.25:0,87,1361	0/0:13,0:7:8.50:0,8,98	1/1:13,2:14:2.69:15,3,0	0/0:18,0:17:36.01:0,36,560	0/0:7,0:6:15.03:0,15,211	0/0:33,0:30:57.19:0,57,961	0/0:13,0:13:33.09:0,33,516	0/1:17,1:18:7.42:7,0,411	0/0:16,0:15:29.92:0,30,440	0/0:12,0:12:24.08:0,24,395	1/1:6,0:4:0.89:2,1,0	0/0:27,0:27:75.21:0,75,1207	0/0:15,0:7:9.03:0,9,150	0/0:5,0:5:9.03:0,9,146	0/0:141,0:130:99:0,260,4377	0/0:19,0:19:30.10:0,30,481	0/0:8,0:8:12.04:0,12,191	0/0:55,0:55:99:0,111,1791	0/0:20,0:20:26.68:0,27,404	0/1:32,1:32:99:101,0,207	0/1:5,1:6:0:0,0,0	0/1:7,0:7:13.59:14,0,22
chr10	2344530	.	T	TGC	431.92	PASS	AB=0.888;AC=4;AF=0.077;AN=52;BaseQRankSum=4.374;DP=607;FS=18.491;HRun=0;HaplotypeScore=93.0475;InbreedingCoeff=0.2342;MQ=46.42;MQ0=22;MQRankSum=-6.743;QD=8.47;ReadPosRankSum=-1.860;VQSLOD=1.6980;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	0/0:9,0:9:21.49:0,21,272	0/0:25,0:2:2.97:0,3,20	0/0:35,0:4:11.99:0,12,136	0/0:13,0:13:21.06:0,21,282	0/0:10,0:8:21.07:0,21,300	0/0:35,0:35:90.12:0,90,1111	0/1:13,0:7:24.99:114,0,25	0/0:8,4:12:3.40:0,3,18	0/0:18,0:17:38.81:0,39,471	0/0:7,0:6:15.05:0,15,210	0/0:32,0:30:63.12:0,63,839	0/0:14,0:14:35.77:0,36,438	0/0:15,0:15:30.41:0,30,380	0/0:14,0:13:24.06:0,24,325	0/0:11,0:11:21.07:0,21,299	0/0:6,0:4:2.96:0,3,19	0/0:27,0:27:75.12:0,75,951	0/0:13,0:8:18.03:0,18,207	0/0:5,0:5:11.97:0,12,113	0/0:142,0:132:99:0,300,3770	0/0:16,0:16:30.10:0,30,428	0/0:9,0:9:14.41:0,14,179	0/0:56,0:56:99:0,120,1501	0/0:16,0:16:6.13:0,6,316	0/1:22,8:30:52.63:390,0,53	./.	1/1:6,1:7:5.76:32,6,0
chr10	2344591	.	G	GCA	190.71	PASS	AB=0.867;AC=5;AF=0.100;AN=50;BaseQRankSum=1.946;DP=631;FS=14.728;HRun=0;HaplotypeScore=87.5436;InbreedingCoeff=0.4575;MQ=43.77;MQ0=27;MQRankSum=-3.060;QD=10.04;ReadPosRankSum=-0.007;VQSLOD=1.8155;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	0/0:3,0:2:3.01:0,3,46	0/0:54,0:9:24.52:0,25,323	0/0:70,0:14:41.72:0,42,557	0/0:11,0:11:9.01:0,9,116	0/0:12,0:11:14.90:0,15,228	0/0:37,0:37:66.08:0,66,966	1/1:4,1:1:3.01:49,3,0	./.	0/0:23,0:23:54.03:0,54,755	0/0:10,0:9:15.05:0,15,224	0/0:21,0:21:45.07:0,45,668	0/0:13,0:13:27.09:0,27,409	0/0:23,0:22:33.11:0,33,499	0/0:10,0:10:21.07:0,21,314	0/0:7,0:7:9.03:0,9,138	./.	0/0:23,0:23:57.13:0,57,847	0/0:23,0:15:39.12:0,39,525	0/0:9,0:8:18.06:0,18,275	0/0:156,0:140:99:0,334,4905	0/0:12,0:12:18.06:0,18,274	0/0:12,0:12:15.05:0,15,229	0/0:54,0:53:99:0,114,1687	0/0:17,0:17:15.53:0,16,230	0/1:11,2:11:93.35:187,0,93	1/1:0,1:1:3.01:58,3,0	0/0:4,0:3:8:0,8,49
chr10	2344619	.	GTGTA	G	170.60	PASS	AB=0.956;AC=7;AF=0.135;AN=52;BaseQRankSum=6.253;DP=671;FS=10.978;HRun=0;HaplotypeScore=110.3922;InbreedingCoeff=0.0225;MQ=43.62;MQ0=23;MQRankSum=-5.052;QD=0.98;ReadPosRankSum=-2.719;VQSLOD=0.1223;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/0:9,0:9:18.06:0,18,370	0/1:51,4:13:76.66:77,0,305	0/1:58,4:17:99:135,0,298	0/0:14,0:14:1.01:0,1,229	0/0:15,0:14:22.49:0,22,476	0/0:39,0:39:62.97:0,63,1555	0/0:8,0:4:12.03:0,12,128	./.	0/1:30,1:28:5.93:6,0,985	0/0:9,0:8:21.07:0,21,564	0/0:27,0:27:57.19:0,57,1282	0/0:12,0:11:14.74:0,15,320	0/0:24,0:22:30.08:0,30,721	0/0:7,0:7:18.06:0,18,443	0/0:7,0:7:6.02:0,6,149	1/1:5,0:3:2.74:12,3,0	0/0:23,0:22:54.15:0,54,1248	0/0:18,0:14:29.83:0,30,569	0/0:10,1:11:15.05:0,15,366	0/0:165,0:146:99:0,318,7801	0/0:13,1:14:12.01:0,12,205	0/0:16,0:16:27.38:0,27,700	0/0:59,0:58:99:0,129,3096	0/0:15,1:16:17.81:0,18,376	0/1:15,1:13:33.28:33,0,416	0/0:1,0:1:3.01:0,3,45	0/1:5,0:3:25.39:25,0,37
chr10	2344636	.	C	CGTGT	434.42	PASS	AB=0.900;AC=8;AF=0.160;AN=50;BaseQRankSum=4.184;DP=601;FS=17.970;HRun=0;HaplotypeScore=116.8126;InbreedingCoeff=0.5179;MQ=44.21;MQ0=17;MQRankSum=-5.617;QD=6.58;ReadPosRankSum=-1.802;VQSLOD=1.1275;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:13,0:13:20.83:0,21,357	0/1:33,0:6:9.33:9,0,55	0/0:40,0:8:17.09:0,17,193	0/0:18,0:18:12.04:0,12,226	0/0:14,0:12:20.95:0,21,346	0/0:35,0:35:53.17:0,53,766	1/1:3,4:3:9.03:241,9,0	./.	0/0:29,0:26:26.80:0,27,723	0/0:9,0:9:17.99:0,18,258	0/0:28,0:29:51.54:0,52,824	0/0:12,0:11:11.41:0,11,190	0/0:22,0:21:23.98:0,24,366	0/0:7,0:8:18.06:0,18,314	0/0:7,0:7:3.01:0,3,57	1/1:7,0:5:3.01:30,3,0	0/0:22,0:22:59.70:0,60,909	0/0:11,0:8:1.19:0,1,154	0/0:14,0:14:17.23:0,17,235	0/0:141,0:129:99:0,251,3948	0/0:17,0:16:11.51:0,12,188	0/0:21,0:21:26.61:0,27,375	0/0:53,0:52:99:0,105,1809	0/0:18,0:18:26.82:0,27,370	1/1:14,1:12:19.93:234,20,0	./.	0/1:3,1:3:25.82:52,0,26
chr10	2344848	.	TG	T	910.64	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.422;DP=563;FS=0.000;HRun=1;HaplotypeScore=68.9624;InbreedingCoeff=0.9675;MQ=88.80;MQ0=0;MQRankSum=-0.681;QD=32.52;ReadPosRankSum=2.438;VQSLOD=3.3441;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:93.32:0,93,1484	0/0:17,0:17:45.14:0,45,696	0/0:31,0:31:90.17:0,90,1377	0/0:21,0:21:57.14:0,57,872	0/0:24,0:24:69.24:0,69,1100	0/0:17,0:17:48.16:0,48,766	0/0:18,0:18:54.18:0,54,863	0/0:24,0:24:72.23:0,72,1127	0/0:25,0:25:63.21:0,63,1006	0/0:21,0:21:63.21:0,63,1007	0/0:14,0:14:33.11:0,33,526	0/0:18,0:18:51.17:0,51,814	0/0:26,0:26:75.24:0,75,1173	0/0:10,0:10:30.10:0,30,479	0/0:21,0:21:60.20:0,60,958	0/0:16,0:16:48.16:0,48,754	1/1:0,28:28:75.17:1006,75,0	0/0:27,0:27:81.28:0,81,1285	0/0:13,0:13:39.13:0,39,620	0/0:18,0:18:51.17:0,51,814	0/0:35,0:35:96.33:0,96,1534	0/0:23,0:23:48.16:0,48,765	0/0:20,0:20:51.17:0,51,814	0/0:14,0:14:39.09:0,39,595	0/0:11,0:11:24.08:0,24,383	0/0:15,0:15:45.15:0,45,719	0/0:15,0:15:39.09:0,39,594	0/0:4,0:4:12.04:0,12,192
chr10	2345214	.	TAGAC	T	1126.19	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.977;DP=475;FS=0.887;HRun=0;HaplotypeScore=149.3940;InbreedingCoeff=0.9939;MQ=86.22;MQ0=0;MQRankSum=-5.815;QD=48.96;ReadPosRankSum=0.830;VQSLOD=4.5078;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:87.30:0,87,2328	0/0:11,0:11:33.11:0,33,895	0/0:16,0:16:45.15:0,45,1127	0/0:24,0:25:62.80:0,63,1462	0/0:17,0:17:45.15:0,45,1205	0/0:14,0:14:42.14:0,42,1111	0/0:17,0:17:45.15:0,45,1223	0/0:28,0:28:78.18:0,78,1930	1/1:1,22:23:66.19:1221,66,0	0/0:16,0:16:48.16:0,48,1299	0/0:11,0:11:27.09:0,27,692	0/0:15,0:15:39.13:0,39,1042	0/0:12,0:12:33.11:0,33,888	0/0:12,0:12:33.11:0,33,873	0/0:18,0:18:51.18:0,51,1396	0/0:15,0:15:39.13:0,39,1052	0/0:26,0:26:75.26:0,75,2040	0/0:12,0:12:36.12:0,36,986	0/0:23,0:23:69.24:0,69,1867	0/0:19,0:19:57.20:0,57,1528	0/0:13,0:13:39.13:0,39,1068	0/0:12,0:12:27.09:0,27,739	0/0:19,0:19:51.17:0,51,1332	0/0:13,0:13:33.11:0,33,865	0/0:11,0:11:24.08:0,24,611	0/0:14,0:14:36.12:0,36,928	0/0:18,0:17:51.18:0,51,1347	0/0:12,0:12:30.10:0,30,821
chr10	2345283	.	A	AT	15029.80	PASS	AB=0.850;AC=54;AF=0.964;AN=56;BaseQRankSum=0.928;DP=445;FS=0.000;HRun=4;HaplotypeScore=177.3074;InbreedingCoeff=-0.0319;MQ=52.52;MQ0=0;MQRankSum=-2.380;QD=33.77;ReadPosRankSum=1.968;VQSLOD=2.8180;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,26:32:63.19:835,63,0	1/1:0,12:12:36.12:489,36,0	0/1:4,3:6:19.01:119,0,19	0/1:8,0:9:8.31:21,0,8	1/1:4,17:21:53.92:658,54,0	1/1:1,12:13:39.09:509,39,0	1/1:1,11:12:36.11:475,36,0	1/1:8,30:38:99:1332,102,0	1/1:0,14:14:42.14:571,42,0	1/1:5,22:27:78.19:1019,78,0	1/1:5,24:29:69.23:932,69,0	1/1:0,8:8:24.08:325,24,0	1/1:2,7:9:24.08:323,24,0	1/1:1,10:11:33.04:414,33,0	1/1:2,14:16:45.01:566,45,0	1/1:2,11:13:33.11:448,33,0	1/1:2,12:14:35.97:443,36,0	1/1:2,7:9:21.07:286,21,0	1/1:2,8:9:21.07:287,21,0	1/1:2,20:22:60.11:785,60,0	1/1:0,3:3:9.03:122,9,0	1/1:3,11:14:36.07:459,36,0	1/1:2,20:22:57.19:769,57,0	1/1:1,4:5:11.97:140,12,0	1/1:6,24:30:86.83:1071,87,0	1/1:3,27:30:84.23:1107,84,0	1/1:2,6:9:27.09:361,27,0	1/1:1,4:5:12.04:163,12,0
chr10	2345291	.	C	CT	15447.63	PASS	AB=0.818;AC=55;AF=0.982;AN=56;BaseQRankSum=-0.368;DP=460;FS=0.000;HRun=4;HaplotypeScore=184.6108;InbreedingCoeff=-0.0151;MQ=54.10;MQ0=0;MQRankSum=-0.906;QD=33.58;ReadPosRankSum=2.327;VQSLOD=2.7675;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,27:30:66.09:836,66,0	1/1:2,12:14:36.09:470,36,0	1/1:4,5:8:20.87:240,21,0	0/1:7,2:9:23.87:24,0,47	1/1:2,17:19:51.13:673,51,0	1/1:2,13:15:42.09:536,42,0	1/1:2,10:12:30.10:409,30,0	1/1:5,30:35:96.32:1308,96,0	1/1:1,14:15:45.04:569,45,0	1/1:5,23:28:75.24:1009,75,0	1/1:1,26:27:72.20:959,72,0	1/1:4,9:13:29.89:377,30,0	1/1:2,5:7:15.02:184,15,0	1/1:4,8:12:24.08:327,24,0	1/1:3,13:16:39.13:531,39,0	1/1:1,11:12:33.11:449,33,0	1/1:3,17:19:48.09:611,48,0	1/1:2,8:10:30.05:373,30,0	1/1:6,3:8:18.05:217,18,0	1/1:1,22:23:63.17:837,63,0	1/1:0,4:4:9.03:123,9,0	1/1:1,13:14:42.13:557,42,0	1/1:3,18:21:51.17:694,51,0	1/1:0,7:7:18.06:242,18,0	1/1:3,29:32:81.27:1103,81,0	1/1:0,28:28:81.27:1105,81,0	1/1:3,9:12:36.05:438,36,0	1/1:0,6:6:18.06:246,18,0
chr10	2345543	.	CTGTG	C	1429.50	PASS	AB=1.000;AC=12;AF=0.214;AN=56;BaseQRankSum=0.974;DP=512;FS=0.000;HRun=0;HaplotypeScore=100.5446;InbreedingCoeff=0.6286;MQ=56.01;MQ0=25;MQRankSum=1.186;QD=11.62;ReadPosRankSum=-1.198;VQSLOD=2.9111;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:28:39.09:0,39,628	0/0:3,0:2:3.01:0,3,35	0/0:20,0:7:8.53:0,9,204	0/1:29,0:16:12.33:12,0,184	0/0:20,0:20:26.72:0,27,416	0/0:17,0:17:38.37:0,38,618	0/0:29,0:27:45.62:0,46,712	1/1:11,11:22:32.84:507,33,0	1/1:4,0:11:3.01:35,3,0	0/0:18,0:18:26.76:0,27,311	0/0:15,0:15:18.01:0,18,292	0/0:12,0:12:27.08:0,27,419	0/0:17,0:16:33.09:0,33,549	0/0:11,0:9:21.96:0,22,333	0/0:12,0:11:18.53:0,19,281	0/1:11,0:11:17.77:18,0,273	0/0:20,0:17:32.02:0,32,399	0/0:19,0:19:36.91:0,37,526	0/0:15,0:13:21.05:0,21,320	0/0:20,0:19:23.91:0,24,356	0/0:30,0:27:33.58:0,34,557	0/0:14,0:14:12.04:0,12,200	0/0:15,0:14:21.04:0,21,391	0/0:40,0:36:36.59:0,37,650	0/0:12,0:11:12.04:0,12,201	1/1:22,0:21:2.21:499,2,0	1/1:24,0:21:30.10:451,30,0	1/1:4,0:4:7.20:66,7,0
chr10	2347542	.	GATT	G	604.21	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.111;DP=657;FS=5.515;HRun=0;HaplotypeScore=104.9997;InbreedingCoeff=0.9984;MQ=89.70;MQ0=0;MQRankSum=0.604;QD=30.21;ReadPosRankSum=1.490;VQSLOD=3.5831;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,132,2985	0/0:11,0:11:30.10:0,30,619	0/0:29,0:29:78.21:0,78,1548	0/0:28,0:28:75.23:0,75,1531	0/0:21,0:21:57.03:0,57,1190	0/0:17,0:17:48.09:0,48,939	0/0:28,0:28:84.29:0,84,1870	0/0:30,0:30:86.95:0,87,1833	1/1:0,20:20:42.14:699,42,0	0/0:15,0:15:45.14:0,45,922	0/0:19,0:19:53.87:0,54,1027	0/0:22,0:22:63.15:0,63,1373	0/0:19,0:19:57.12:0,57,1174	0/0:24,0:24:69.07:0,69,1371	0/0:22,0:22:63.14:0,63,1320	0/0:20,0:20:54.10:0,54,1074	0/0:19,0:19:57.20:0,57,1275	0/0:9,0:9:27.08:0,27,568	0/0:25,0:24:69.24:0,69,1556	0/0:25,0:25:69.24:0,69,1543	0/0:39,0:39:99:0,114,2485	0/0:27,0:27:81.24:0,81,1734	0/0:22,0:22:66.23:0,66,1494	0/0:28,0:28:72.23:0,72,1575	0/0:21,0:21:63.11:0,63,1329	0/0:24,0:24:72.25:0,72,1615	0/0:30,0:30:90.26:0,90,1874	0/0:16,0:16:48.16:0,48,1088
chr10	2348124	.	C	CTA	2018.97	PASS	AB=0.880;AC=13;AF=0.250;AN=52;BaseQRankSum=5.623;DP=533;FS=0.000;HRun=0;HaplotypeScore=39.1580;InbreedingCoeff=0.7604;MQ=26.91;MQ0=175;MQRankSum=-5.829;QD=14.63;ReadPosRankSum=2.056;VQSLOD=2.9078;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:16,10:11:21.07:376,21,0	0/0:6,0:3:9.03:0,9,129	./.	./.	0/0:14,0:7:6.02:0,6,86	0/0:12,0:10:12.04:0,12,172	0/0:32,0:12:24.08:0,24,343	1/1:22,4:4:9.03:162,9,0	1/1:1,14:12:24.08:430,24,0	0/0:16,0:8:24.04:0,24,321	0/0:13,0:4:6.02:0,6,86	0/0:26,0:15:24.08:0,24,343	0/0:17,0:7:9.03:0,9,128	0/0:32,0:16:15.05:0,15,215	0/0:15,0:11:9.03:0,9,129	0/0:14,0:11:15.05:0,15,214	0/1:19,3:9:24.62:48,0,25	0/0:35,0:20:21.07:0,21,301	0/0:28,0:12:27.08:0,27,369	0/0:16,0:8:18.06:0,18,258	0/0:58,0:13:12.04:0,12,172	0/0:9,0:6:15.05:0,15,214	0/0:18,0:10:15.05:0,15,214	0/0:26,0:18:27.09:0,27,387	0/0:8,0:6:6:0,6,86	1/1:11,12:16:42.14:748,42,0	1/1:7,9:12:12.04:216,12,0	1/1:3,6:6:12.04:215,12,0
chr10	2348300	.	CG	C	217.44	PASS	AB=0.917;AC=11;AF=0.229;AN=48;BaseQRankSum=1.755;DP=157;FS=15.922;HRun=10;HaplotypeScore=21.9757;InbreedingCoeff=0.3603;MQ=82.58;MQ0=7;MQRankSum=1.046;QD=3.88;ReadPosRankSum=1.719;VQSLOD=-0.4753;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	0/0:6,0:5:9.02:0,9,99	0/1:14,0:8:3.41:3,0,62	0/0:7,0:6:3.01:0,3,34	0/1:6,0:6:1.68:2,0,109	0/0:2,0:2:0:0,0,0	0/0:8,0:8:11.92:0,12,94	1/1:11,8:11:23.05:185,23,0	0/0:5,0:4:6.32:0,6,49	./.	0/0:3,0:3:6.02:0,6,66	1/1:5,0:4:0.47:1,0,0	./.	0/0:5,0:4:3.01:0,3,33	0/0:4,0:4:3.47:0,3,26	0/0:5,0:5:5.98:0,6,53	0/0:3,0:5:11.01:0,11,67	0/0:11,0:9:21.01:0,21,210	0/0:4,0:4:6.02:0,6,66	./.	0/0:11,0:11:24:0,24,242	0/0:4,0:4:9.01:0,9,91	0/0:6,0:6:11.94:0,12,98	0/0:3,0:3:3.89:0,4,36	0/0:4,0:4:7.56:0,8,61	0/1:2,1:3:19.91:20,0,20	1/1:2,2:4:3:26,3,0	1/1:2,3:5:13.24:107,13,0
chr10	2348396	.	GAA	G	2158.40	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=9.292;DP=280;FS=1.217;HRun=8;HaplotypeScore=33.1958;InbreedingCoeff=0.7928;MQ=61.06;MQ0=3;MQRankSum=-1.627;QD=26.00;ReadPosRankSum=-0.058;VQSLOD=1.9920;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,17:18:31.20:599,31,0	0/0:4,0:4:12.03:0,12,178	0/1:10,0:7:12.53:13,0,236	0/0:3,0:2:2.59:0,3,50	0/0:11,0:11:30.10:0,30,506	0/0:10,0:10:27.09:0,27,456	0/0:12,0:12:30.10:0,30,507	1/1:5,15:19:45.05:515,45,0	0/0:10,0:10:27.06:0,27,426	0/0:5,0:5:15.05:0,15,254	0/0:12,0:12:30.10:0,30,507	0/0:7,0:7:18.06:0,18,304	0/0:4,0:4:12.04:0,12,202	0/0:5,0:5:15.05:0,15,254	0/0:2,0:2:6.02:0,6,101	0/0:4,0:4:12.01:0,12,173	0/0:28,0:30:86.22:0,86,1356	0/0:15,0:15:42.12:0,42,672	0/0:6,0:6:15.05:0,15,253	0/0:11,0:11:33.11:0,33,555	0/0:6,0:6:18.06:0,18,304	0/0:3,0:3:9.03:0,9,152	0/0:7,0:7:18.06:0,18,304	0/0:8,0:8:24.08:0,24,400	0/0:21,0:22:60.20:0,60,991	1/1:2,9:11:27.08:329,27,0	1/1:0,8:8:24.08:293,24,0	1/1:0,16:16:48.15:585,48,0
chr10	2351224	.	G	GT	5323.23	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-14.261;DP=634;FS=1.550;HRun=6;HaplotypeScore=60.1321;InbreedingCoeff=0.9847;MQ=74.29;MQ0=0;MQRankSum=-2.921;QD=34.34;ReadPosRankSum=1.025;VQSLOD=4.4504;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,40:41:99:1470,117,0	0/0:4,0:4:9.02:0,9,92	0/0:25,0:25:57.01:0,57,537	0/0:16,0:16:35.90:0,36,346	0/0:29,0:29:78.17:0,78,796	0/0:18,0:18:39.08:0,39,398	0/0:20,0:21:62.16:0,62,611	1/1:3,23:26:69.22:868,69,0	1/1:1,24:25:72.23:905,72,0	0/0:19,0:19:57.12:0,57,577	0/0:17,0:17:51.10:0,51,512	0/0:18,0:18:51.10:0,51,513	0/0:25,0:25:66.09:0,66,656	0/0:36,0:36:99:0,102,1033	0/0:27,0:27:72.16:0,72,735	0/0:22,0:22:66.15:0,66,673	0/0:35,0:35:99:0,102,1031	0/0:16,0:16:48.11:0,48,490	0/0:34,0:34:93.19:0,93,937	0/0:17,0:17:39.08:0,39,398	0/0:18,0:18:54.12:0,54,551	0/0:19,0:19:54.07:0,54,534	0/0:16,0:16:48.09:0,48,481	0/0:26,0:26:75.14:0,75,756	0/0:21,0:21:57.13:0,57,582	1/1:2,19:21:26.57:649,27,0	1/1:3,34:37:99:1243,99,0	1/1:0,5:5:15.05:189,15,0
chr10	2351692	.	TC	T	1891.91	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=10.780;DP=661;FS=9.595;HRun=2;HaplotypeScore=68.9520;InbreedingCoeff=0.9885;MQ=82.30;MQ0=0;MQRankSum=0.249;QD=35.04;ReadPosRankSum=1.513;VQSLOD=3.7487;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,114,1691	0/0:12,0:12:36.12:0,36,538	0/0:17,1:18:43.91:0,44,604	0/0:17,1:19:32.26:0,32,552	0/0:13,0:13:39.12:0,39,564	0/0:22,0:22:63.19:0,63,906	0/0:30,0:30:87.29:0,87,1301	0/0:31,0:31:90.30:0,90,1347	0/0:34,0:34:96.31:0,96,1416	0/0:23,0:23:66.22:0,66,971	0/0:19,0:19:57.19:0,57,853	0/0:20,0:20:60.20:0,60,898	0/0:14,0:14:36.12:0,36,536	0/0:21,0:21:63.21:0,63,941	0/0:23,0:23:69.22:0,69,1010	0/0:26,0:26:78.26:0,78,1169	1/1:0,54:54:99:1987,153,0	0/0:21,0:21:63.21:0,63,944	0/0:10,0:10:27.09:0,27,405	0/0:24,0:24:66.22:0,66,985	0/0:49,0:49:99:0,144,2136	0/0:25,0:25:72.22:0,72,1042	0/0:6,0:6:18.06:0,18,270	0/0:37,0:37:99:0,108,1571	0/0:21,0:21:60.19:0,60,880	0/0:23,0:23:69.23:0,69,1016	0/0:17,0:17:48.16:0,48,716	0/0:8,0:8:24.08:0,24,360
chr10	2354381	.	AC	A	4627.23	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=10.749;DP=553;FS=57.005;HRun=4;HaplotypeScore=60.6159;InbreedingCoeff=0.9972;MQ=82.68;MQ0=0;MQRankSum=-7.815;QD=27.38;ReadPosRankSum=0.639;VQSLOD=0.5827;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,49:52:99:1544,129,0	0/0:7,0:7:21.07:0,21,294	0/0:25,0:25:69.20:0,69,928	0/0:20,0:20:51.10:0,51,662	0/0:19,0:19:39.13:0,39,546	0/0:19,0:19:48.16:0,48,668	0/0:21,0:21:54.15:0,54,719	1/1:1,28:29:81.22:949,81,0	1/1:29,0:29:36.24:96,36,0	0/0:17,0:17:45.15:0,45,630	0/0:9,0:9:27.09:0,27,375	0/0:19,0:19:57.13:0,57,752	0/0:21,0:21:54.18:0,54,756	0/0:21,0:20:54.18:0,54,754	0/0:21,0:21:63.20:0,63,865	0/0:13,0:13:33.63:0,34,495	0/0:25,0:25:69.23:0,69,966	0/0:17,0:17:48.15:0,48,654	0/0:24,0:24:63.21:0,63,880	0/0:12,0:12:36.10:0,36,484	0/0:23,0:23:57.19:0,57,798	0/0:11,0:11:33.11:0,33,460	0/0:8,0:8:18.06:0,18,252	0/0:19,0:19:51.17:0,51,714	0/0:13,0:13:39.13:0,39,546	1/1:2,21:23:66.19:779,66,0	1/1:0,20:20:57.17:683,57,0	1/1:0,16:16:48.15:576,48,0
chr10	2354384	.	CCT	C	960.02	PASS	AB=0.929;AC=3;AF=0.054;AN=56;BaseQRankSum=2.147;DP=548;FS=22.374;HRun=0;HaplotypeScore=82.8042;InbreedingCoeff=0.6883;MQ=81.36;MQ0=0;MQRankSum=-3.798;QD=23.42;ReadPosRankSum=0.334;VQSLOD=2.2908;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,117,453	0/0:7,0:7:21.07:0,21,391	0/0:24,0:24:69.19:0,69,1135	0/0:18,0:18:54.09:0,54,866	0/0:17,0:17:42.14:0,42,769	0/0:18,0:18:48.15:0,48,863	0/0:23,0:23:54.10:0,54,937	0/0:30,0:30:79.89:0,80,410	1/1:0,28:28:69.23:1054,69,0	0/0:17,0:17:51.17:0,51,913	0/0:10,0:10:30.08:0,30,525	0/0:20,0:20:57.14:0,57,1018	0/0:20,0:20:54.18:0,54,1005	0/0:20,0:19:54.19:0,54,1006	0/0:22,0:22:66.20:0,66,1168	0/1:12,1:13:6.66:7,0,615	0/0:25,0:25:72.25:0,72,1329	0/0:18,0:18:48.14:0,48,861	0/0:24,0:24:69.17:0,69,1189	0/0:12,0:12:36.12:0,36,670	0/0:21,0:21:57.20:0,57,1062	0/0:14,0:14:42.07:0,42,683	0/0:7,0:7:21.04:0,21,357	0/0:18,0:18:51.17:0,51,950	0/0:13,0:13:39.13:0,39,703	0/0:22,0:22:32.85:0,33,183	0/0:21,0:21:41.90:0,42,191	0/0:16,0:16:41.54:0,42,158
chr10	2354521	.	GA	G	3386.01	PASS	AB=0.925;AC=43;AF=0.935;AN=46;BaseQRankSum=-4.878;DP=212;FS=2.123;HRun=2;HaplotypeScore=31.4596;InbreedingCoeff=0.3865;MQ=76.87;MQ0=10;MQRankSum=-4.293;QD=18.50;ReadPosRankSum=2.785;VQSLOD=3.7332;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:2:6.01:63,6,0	1/1:0,4:4:9.03:117,9,0	0/1:34,2:10:1.70:2,0,111	0/0:21,1:9:12.97:0,13,129	1/1:3,10:13:12.04:156,12,0	1/1:2,11:11:24.08:311,24,0	1/1:2,9:11:12.04:156,12,0	./.	1/1:1,0:1:3:26,3,0	1/1:2,9:10:24.08:312,24,0	1/1:0,13:11:24.08:306,24,0	1/1:0,2:2:6.02:78,6,0	./.	1/1:0,3:3:9.03:117,9,0	1/1:2,2:4:3.01:39,3,0	1/1:0,7:7:18.06:233,18,0	1/1:1,0:1:3:25,3,0	1/1:0,8:8:15.05:195,15,0	1/1:0,10:10:27.09:348,27,0	1/1:0,11:10:24.08:312,24,0	1/1:1,6:4:6.02:78,6,0	1/1:0,5:5:15.05:194,15,0	1/1:0,4:4:6.02:78,6,0	1/1:1,6:7:5.38:47,5,0	1/1:0,7:7:15.05:195,15,0	./.	./.	./.
chr10	2354590	.	A	AC	185.70	PASS	AB=0.804;AC=8;AF=0.174;AN=46;BaseQRankSum=4.220;DP=239;FS=6.814;HRun=3;HaplotypeScore=34.7317;InbreedingCoeff=-0.0561;MQ=39.80;MQ0=46;MQRankSum=-3.717;QD=3.20;ReadPosRankSum=0.102;VQSLOD=-0.4147;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:5,2:4:21.61:44,0,22	./.	0/0:24,0:2:5.81:0,6,32	0/0:25,1:4:7.93:0,8,52	0/0:13,0:11:17.88:0,18,146	0/1:5,2:6:18.61:43,0,19	0/0:4,0:2:6:0,6,50	./.	1/1:1,2:3:6.01:56,6,0	0/1:5,1:4:21.91:22,0,51	0/0:16,0:15:20.41:0,20,161	0/0:6,0:6:8.98:0,9,74	0/0:6,0:3:5.50:0,5,26	0/0:5,0:3:5.93:0,6,40	0/0:4,0:3:8.75:0,9,69	0/0:5,0:4:6:0,6,55	0/1:3,4:5:17.43:96,0,17	0/0:10,0:9:23.12:0,23,149	0/0:14,0:12:28.92:0,29,212	0/1:9,1:8:9.28:9,0,118	0/1:12,2:9:38.62:39,0,66	0/0:6,0:6:8.89:0,9,58	0/0:6,0:6:8.60:0,9,53	0/0:6,0:4:2.47:0,2,25	0/0:6,0:5:8.99:0,9,79	./.	./.	./.
chr10	2356932	.	AG	A	8670.96	PASS	AB=1.000;AC=53;AF=0.946;AN=56;BaseQRankSum=1.633;DP=433;FS=0.000;HRun=1;HaplotypeScore=85.6706;InbreedingCoeff=-0.0586;MQ=74.13;MQ0=0;MQRankSum=0.486;QD=20.03;ReadPosRankSum=5.000;VQSLOD=5.0545;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,20:20:39.13:523,39,0	1/1:8,0:8:23.17:135,23,0	0/1:12,0:12:17.24:119,0,17	0/1:15,0:15:15.53:132,0,16	1/1:12,0:12:26.07:156,26,0	1/1:11,0:11:31.50:176,31,0	1/1:18,0:18:2.77:158,3,0	1/1:0,24:24:72.24:995,72,0	1/1:0,18:18:51.17:711,51,0	1/1:14,0:14:38.54:200,39,0	1/1:10,0:10:26.17:160,26,0	1/1:20,0:20:52.54:322,53,0	1/1:24,0:24:61.51:395,62,0	1/1:15,0:15:38.26:246,38,0	1/1:13,0:13:36.62:222,37,0	0/1:17,0:17:3.08:141,0,3	1/1:0,11:11:24.08:334,24,0	1/1:8,0:8:22.81:121,23,0	1/1:15,0:15:12.19:123,12,0	1/1:13,0:13:34.96:216,35,0	1/1:23,0:23:22.09:247,22,0	1/1:18,0:18:14:248,14,0	1/1:14,1:15:22.93:238,23,0	1/1:14,0:14:28.93:169,29,0	1/1:21,0:21:60.46:351,60,0	1/1:0,11:11:33.11:455,33,0	1/1:0,18:18:54.18:751,54,0	1/1:0,15:15:45.15:628,45,0
chr10	2357279	.	A	ACG	1197.97	PASS	AB=0.964;AC=36;AF=0.692;AN=52;BaseQRankSum=0.520;DP=253;FS=16.970;HRun=0;HaplotypeScore=89.0111;InbreedingCoeff=0.1349;MQ=31.14;MQ0=9;MQRankSum=-4.038;QD=5.30;ReadPosRankSum=3.355;VQSLOD=1.6036;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:14:2.84:9,3,0	0/0:6,0:5:0.69:0,1,2	./.	./.	0/1:8,0:8:0:0,0,0	1/1:12,0:10:6.31:84,6,0	1/1:13,0:12:11.25:130,11,0	1/1:8,0:8:13.78:57,14,0	0/0:6,0:6:3.01:0,3,13	1/1:12,0:12:13.36:55,13,0	1/1:5,0:5:2.04:6,2,0	1/1:7,0:6:7.26:70,7,0	0/1:7,0:6:6.46:19,0,6	0/1:14,0:12:2.82:3,0,24	1/1:11,0:11:8.95:130,9,0	1/1:12,0:12:6.02:95,6,0	0/0:7,0:7:2.10:0,2,9	0/1:4,0:4:8.68:9,0,21	1/1:11,0:11:25.09:189,25,0	1/1:4,3:6:3.90:59,4,0	0/1:10,0:10:0.75:1,0,39	1/1:9,6:14:2.87:15,3,0	0/1:7,0:7:35.22:43,0,35	0/1:19,0:18:29.33:56,0,29	1/1:9,0:9:6.02:97,6,0	1/1:15,0:15:23.45:122,23,0	0/0:8,0:7:0.12:0,0,1	0/1:3,2:4:10.93:77,0,11
chr10	2359040	.	ATC	A	1173.89	PASS	AB=0.938;AC=24;AF=0.444;AN=54;BaseQRankSum=2.204;DP=720;FS=10.342;HRun=0;HaplotypeScore=95.8618;InbreedingCoeff=-0.4770;MQ=56.60;MQ0=21;MQRankSum=0.150;QD=2.24;ReadPosRankSum=-0.005;VQSLOD=1.3240;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:2.74:0,3,12	0/1:17,0:16:13.53:14,0,217	./.	0/0:40,0:16:0:0,0,0	0/1:35,0:35:13.16:13,0,619	0/1:21,0:21:99:114,0,288	0/1:30,1:31:99:150,0,263	1/1:38,0:31:5.96:44,6,0	0/0:5,0:31:6.34:0,6,51	0/1:21,2:23:59.04:59,0,266	0/1:22,0:22:21.15:21,0,357	0/1:25,0:25:99:102,0,174	0/0:24,0:25:1.98:0,2,392	0/1:20,0:21:83.08:83,0,230	0/1:9,7:17:59.63:60,0,135	0/1:17,3:20:40.74:41,0,402	1/1:14,9:22:11.93:116,12,0	0/1:21,0:22:31.44:31,0,121	0/1:19,0:18:5.95:6,0,142	0/1:25,0:25:99:128,0,234	0/0:31,11:42:11.69:0,12,513	0/1:32,0:34:58.59:59,0,371	0/1:22,0:20:35.05:35,0,256	0/1:25,3:28:30.66:31,0,380	0/1:17,0:15:16.87:17,0,202	0/1:20,7:26:99:132,0,102	1/1:33,1:33:2.92:66,3,0	0/0:9,0:8:2.13:0,2,4
chr10	2359075	.	T	TCA	1106.16	PASS	AB=0.898;AC=10;AF=0.179;AN=56;BaseQRankSum=8.103;DP=655;FS=2.408;HRun=0;HaplotypeScore=101.7469;InbreedingCoeff=0.3560;MQ=58.79;MQ0=13;MQRankSum=-0.739;QD=6.32;ReadPosRankSum=-1.467;VQSLOD=3.2200;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:25:4.86:35,5,0	0/0:19,0:18:38.21:0,38,428	0/0:18,0:14:32.15:0,32,337	0/0:15,0:10:1.09:0,1,164	0/0:34,0:34:87.95:0,88,1055	0/0:21,0:21:55.72:0,56,609	0/0:28,0:28:68.75:0,69,702	0/1:35,0:28:27.99:356,0,28	1/1:24,0:24:0.26:94,0,0	0/0:30,0:30:54.81:0,55,806	0/0:23,0:23:60.04:0,60,688	0/1:16,0:16:3.90:4,0,376	0/0:19,0:19:33.89:0,34,627	0/0:26,0:26:51.84:0,52,727	0/0:21,0:21:44.97:0,45,449	0/0:22,0:21:60.05:0,60,719	0/0:21,0:20:32.30:0,32,202	0/0:13,0:13:31.76:0,32,316	0/0:11,0:11:29.25:0,29,318	0/0:29,0:28:70.57:0,71,695	0/0:32,0:32:62.72:0,63,728	0/0:36,0:36:87.84:0,88,944	0/0:19,0:19:41.98:0,42,419	0/0:26,0:26:45.85:0,46,676	0/0:17,0:16:45.32:0,45,464	0/1:27,0:27:51.46:288,0,51	0/1:11,25:35:10.34:365,0,10	1/1:3,8:8:6.02:97,6,0
chr10	2359077	.	T	TCTCTCTCACA	1546.75	PASS	AB=1.000;AC=6;AF=0.107;AN=56;BaseQRankSum=-2.123;DP=658;FS=22.338;HRun=0;HaplotypeScore=193.0230;InbreedingCoeff=0.2128;MQ=60.33;MQ0=12;MQRankSum=-1.832;QD=10.24;ReadPosRankSum=-2.361;VQSLOD=0.7812;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:8,15:27:6.02:159,6,0	0/0:18,0:17:48.14:0,48,957	0/0:20,0:16:42.05:0,42,595	0/0:14,0:10:19.09:0,19,303	0/0:33,0:33:93.29:0,93,2113	0/0:22,0:22:63.18:0,63,1261	0/0:30,0:30:56.23:0,56,1497	0/1:34,0:28:28.54:881,0,29	0/1:25,0:25:50.41:119,0,50	0/0:29,0:29:75.25:0,75,1480	0/0:21,0:21:57.19:0,57,1384	0/0:15,0:15:40.08:0,40,943	0/0:19,0:19:57.18:0,57,1306	0/0:26,0:26:75.25:0,75,1641	0/0:22,0:22:51.13:0,51,1008	0/0:22,0:21:57.19:0,57,1599	0/0:22,0:21:15.38:0,15,279	0/0:12,0:12:30.10:0,30,673	0/0:12,0:12:33.10:0,33,637	0/0:28,0:27:74.96:0,75,1600	0/0:33,0:33:66.21:0,66,1596	0/0:37,0:37:93.27:0,93,1953	0/0:18,0:18:39.55:0,40,936	0/0:26,0:26:66.65:0,67,1392	0/0:16,0:15:39.09:0,39,816	0/1:27,0:27:99:450,0,567	0/1:37,0:36:60.46:60,0,134	0/0:11,0:8:2.13:0,2,4
chr10	2362628	.	TCCACAC	T	474.90	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=3.661;DP=513;FS=0.799;HRun=0;HaplotypeScore=106.9917;InbreedingCoeff=0.6974;MQ=61.09;MQ0=11;MQRankSum=-3.805;QD=9.89;ReadPosRankSum=1.814;VQSLOD=1.8801;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:30:65.95:0,66,1175	0/0:12,0:11:30.04:0,30,781	0/0:35,0:25:67.91:0,68,596	0/0:41,0:29:76.60:0,77,691	0/0:6,0:6:14.98:0,15,185	0/0:17,0:16:39.02:0,39,643	0/0:30,0:29:47.56:0,48,1039	0/0:23,0:23:68.85:0,69,591	1/1:0,14:15:9.03:173,9,0	0/0:14,0:13:34.27:0,34,651	0/0:10,0:10:26.70:0,27,470	0/0:12,0:12:36.02:0,36,676	0/0:16,0:16:38.69:0,39,393	0/0:17,0:17:47.83:0,48,638	0/0:22,0:22:44.95:0,45,548	0/0:10,0:10:21.91:0,22,384	1/1:24,0:24:42.71:415,43,0	0/0:20,0:20:50.63:0,51,773	0/0:15,0:14:41.97:0,42,537	0/0:8,0:8:20.72:0,21,270	0/0:32,0:31:77.65:0,78,1061	0/0:13,0:13:29.60:0,30,402	0/0:8,0:8:14.97:0,15,210	0/0:29,0:28:72.04:0,72,1338	0/0:11,0:10:29.91:0,30,442	0/0:22,0:22:9.60:0,10,335	0/1:9,0:9:3.39:3,0,126	0/0:10,0:9:0.86:0,1,148
chr10	2362629	.	CCA	C	151.45	PASS	AB=0.894;AC=17;AF=0.370;AN=46;BaseQRankSum=5.113;DP=529;FS=7.864;HRun=0;HaplotypeScore=74.5064;InbreedingCoeff=0.0472;MQ=60.19;MQ0=13;MQRankSum=-1.407;QD=0.64;ReadPosRankSum=0.757;VQSLOD=0.6889;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:33,1:32:22.78:23,0,75	0/0:12,0:11:17.99:0,18,205	./.	./.	./.	0/1:19,0:18:22.31:22,0,57	0/1:29,1:29:19.50:20,0,155	./.	1/1:15,0:15:4.97:19,5,0	0/0:14,0:13:12.01:0,12,132	0/0:11,0:11:9.02:0,9,111	0/0:12,0:12:6.01:0,6,66	0/0:16,0:16:3.01:0,3,35	0/0:17,0:17:9.01:0,9,110	0/1:21,3:23:25.79:26,0,31	0/1:6,3:9:22.78:23,0,76	1/1:25,0:25:2.37:8,2,0	0/0:20,0:21:6.90:0,7,68	./.	0/1:6,0:8:8.13:8,0,35	0/0:32,0:31:12.01:0,12,130	0/0:16,0:15:9.02:0,9,111	0/0:8,0:8:3.01:0,3,41	0/1:26,4:29:99:100,0,184	0/0:12,0:11:6.01:0,6,67	1/1:19,0:22:2.84:14,3,0	1/1:8,0:9:2.84:14,3,0	1/1:8,0:9:2.84:14,3,0
chr10	2363732	.	G	GA	539.16	PASS	AB=0.875;AC=3;AF=0.054;AN=56;BaseQRankSum=1.819;DP=674;FS=17.034;HRun=9;HaplotypeScore=65.6023;InbreedingCoeff=0.6601;MQ=82.18;MQ0=0;MQRankSum=-2.680;QD=18.59;ReadPosRankSum=0.546;VQSLOD=2.4187;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:95.97:0,96,833	0/0:9,0:9:26.99:0,27,234	0/0:21,0:22:37.99:0,38,304	0/0:19,0:19:34.98:0,35,282	0/0:34,0:34:86.93:0,87,750	0/0:25,0:25:71.98:0,72,625	0/0:13,0:13:26.59:0,27,300	0/0:28,0:28:71.95:0,72,620	1/1:0,22:22:57.15:631,57,0	0/0:33,0:33:86.96:0,87,750	0/0:18,0:18:47.99:0,48,417	0/0:25,0:25:57.60:0,58,554	0/0:26,0:26:62.97:0,63,547	0/0:18,0:18:47.99:0,48,417	0/0:28,0:28:74.98:0,75,651	0/0:27,0:27:74.98:0,75,651	0/0:32,0:32:86.98:0,87,755	0/0:17,0:17:47.98:0,48,417	0/0:11,1:12:26.97:0,27,231	0/0:31,0:31:68.94:0,69,595	0/0:19,0:19:53.99:0,54,469	0/0:33,1:34:50.79:0,51,670	0/0:24,0:24:71.95:0,72,619	0/0:23,0:23:65.95:0,66,568	0/0:22,0:22:65.94:0,66,563	0/0:37,0:37:98.97:0,99,859	0/0:34,0:34:68.93:0,69,595	0/1:6,1:7:12.18:12,0,135
chr10	2363911	.	GTGAA	G	1793.76	PASS	AB=0.933;AC=7;AF=0.125;AN=56;BaseQRankSum=9.682;DP=650;FS=0.000;HRun=0;HaplotypeScore=101.5724;InbreedingCoeff=0.7670;MQ=72.36;MQ0=1;MQRankSum=2.498;QD=18.49;ReadPosRankSum=1.340;VQSLOD=3.2559;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:20,15:35:36.12:560,36,0	0/0:9,0:9:24.05:0,24,473	0/0:20,0:19:9.03:0,9,137	0/0:19,0:19:9.02:0,9,157	0/0:30,0:30:66.21:0,66,1473	0/0:21,1:22:6.56:0,7,1124	0/0:19,0:19:30.09:0,30,668	0/0:25,0:25:33.11:0,33,737	1/1:10,11:22:33.11:504,33,0	0/0:45,0:45:36.88:0,37,1841	0/0:21,0:21:51.18:0,51,1212	0/0:14,0:14:27.08:0,27,575	0/0:31,0:31:60.21:0,60,1405	0/0:22,0:22:39.09:0,39,857	0/0:25,0:25:54.19:0,54,1289	0/0:22,0:22:33.11:0,33,786	1/1:5,21:25:54.18:857,54,0	0/0:17,0:17:33.09:0,33,690	0/0:27,0:27:39.13:0,39,883	0/0:32,0:32:45.15:0,45,1075	0/0:27,0:27:66.22:0,66,1532	0/0:28,0:28:60.21:0,60,1433	0/1:13,1:14:20.56:21,0,496	0/0:20,0:20:42.14:0,42,957	0/0:18,0:18:36.12:0,36,816	0/0:31,0:31:48.16:0,48,1100	0/0:25,0:25:36.12:0,36,855	0/0:3,0:3:9.02:0,9,169
chr10	2366131	.	TA	T	1254.88	PASS	AB=0.802;AC=12;AF=0.231;AN=52;BaseQRankSum=6.303;DP=312;FS=2.061;HRun=11;HaplotypeScore=32.8811;InbreedingCoeff=0.7808;MQ=59.56;MQ0=20;MQRankSum=-1.989;QD=13.21;ReadPosRankSum=-0.122;VQSLOD=2.6501;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,13:16:35.95:296,36,0	0/0:9,0:9:18.05:0,18,192	0/0:16,0:8:15.01:0,15,147	0/1:7,1:4:0.05:0,0,0	0/0:15,1:16:20.45:0,20,408	0/0:9,0:9:24.06:0,24,256	0/0:10,0:10:21.03:0,21,215	1/1:9,19:28:56.88:468,57,0	./.	0/0:16,0:15:42.10:0,42,445	0/0:19,0:20:47.25:0,47,525	0/0:9,0:9:21.05:0,21,224	0/0:10,0:10:23.08:0,23,222	0/0:11,0:10:30.03:0,30,306	0/0:14,0:14:36.05:0,36,372	0/0:8,1:9:20.89:0,21,206	./.	0/0:8,0:6:0.79:0,1,85	0/0:11,0:11:30.07:0,30,318	0/0:11,0:11:33.08:0,33,350	0/0:8,0:6:11.90:0,12,111	0/1:3,2:5:12.51:13,0,84	0/0:10,0:10:23.96:0,24,239	0/0:5,0:4:12.03:0,12,128	0/0:9,0:7:18.52:0,19,192	1/1:2,10:12:29.96:246,30,0	1/1:0,15:17:40.99:326,41,0	1/1:3,3:5:8.98:74,9,0
chr10	2368290	.	TTG	T	130.81	PASS	AB=0.906;AC=10;AF=0.200;AN=50;BaseQRankSum=1.780;DP=521;FS=2.623;HRun=0;HaplotypeScore=68.6277;InbreedingCoeff=-0.1086;MQ=71.05;MQ0=10;MQRankSum=1.137;QD=0.85;ReadPosRankSum=0.161;VQSLOD=1.1883;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:5.99:0,6,50	0/1:8,0:8:14.60:15,0,34	0/0:37,0:21:0:0,0,0	./.	0/1:24,1:25:11.48:11,0,202	0/0:20,0:20:9.03:0,9,131	0/1:19,0:19:18.19:18,0,39	0/0:31,0:29:12.04:0,12,148	1/1:9,0:10:2.84:14,3,0	0/1:18,0:18:20.25:20,0,102	0/0:18,0:18:12.03:0,12,150	0/1:10,4:14:15.92:56,0,16	./.	0/0:10,0:10:9.03:0,9,131	0/0:11,0:11:9.03:0,9,134	0/0:8,0:8:3.01:0,3,45	0/0:18,0:23:21:0,21,225	0/0:14,0:14:9:0,9,110	0/0:19,0:19:9.50:0,10,133	0/1:14,3:17:37.19:37,0,117	0/0:35,0:32:15:0,15,156	0/1:14,2:17:72.04:72,0,75	./.	0/1:19,6:25:17.48:17,0,143	0/0:32,0:32:12.04:0,12,178	0/0:17,0:15:14.97:0,15,137	0/0:10,0:9:6.32:0,6,74	0/0:9,0:9:6.02:0,6,79
chr10	2370280	.	CA	C	3945.30	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=12.403;DP=672;FS=2.044;HRun=9;HaplotypeScore=88.4336;InbreedingCoeff=0.9555;MQ=77.84;MQ0=5;MQRankSum=-7.666;QD=20.99;ReadPosRankSum=2.010;VQSLOD=4.2203;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,30:38:71.06:637,71,0	0/0:13,0:13:36.11:0,36,415	0/0:41,0:31:73.11:0,73,632	0/0:32,0:25:29.85:0,30,237	0/0:28,0:28:69.18:0,69,777	0/0:21,0:21:54.16:0,54,623	0/0:31,0:31:87.25:0,87,994	1/1:7,22:29:75.02:678,75,0	1/1:4,27:31:77.96:703,78,0	0/0:19,0:19:39.11:0,39,443	0/0:18,0:18:48.12:0,48,535	0/0:15,0:15:45.12:0,45,509	0/0:13,0:13:36.11:0,36,415	0/0:24,0:24:60.18:0,60,693	0/0:23,0:23:66.18:0,66,752	0/0:30,1:31:50.76:0,51,830	1/1:5,28:33:78.04:714,78,0	0/0:17,0:17:48.14:0,48,553	0/0:21,0:21:51.05:0,51,544	0/0:28,0:28:69.20:0,69,792	0/0:24,0:24:69.19:0,69,786	0/0:25,0:25:66.18:0,66,752	0/0:14,0:14:39.12:0,39,450	0/0:24,0:24:69.01:0,69,756	0/0:20,0:20:57.04:0,57,603	1/1:7,21:28:2.81:532,3,0	1/1:5,21:26:66.03:598,66,0	1/1:0,3:3:9:82,9,0
chr10	2370296	.	AAAAAG	A	4144.26	PASS	AB=0.622;AC=7;AF=0.125;AN=56;BaseQRankSum=9.572;DP=646;FS=13.276;HRun=0;HaplotypeScore=139.6977;InbreedingCoeff=0.8369;MQ=76.48;MQ0=5;MQRankSum=-6.954;QD=44.56;ReadPosRankSum=-3.978;VQSLOD=2.2437;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:76.14:0,76,2006	0/0:15,0:15:39.13:0,39,1114	0/0:38,0:26:43.52:0,44,861	0/0:26,0:18:24.38:0,24,379	0/0:27,0:27:69.24:0,69,1944	0/0:21,0:21:57.19:0,57,1643	0/0:33,0:33:93.32:0,93,2726	1/1:7,28:35:87.27:1520,87,0	0/0:28,0:28:72.23:0,72,2027	0/0:17,0:17:51.17:0,51,1379	0/0:15,0:15:42.10:0,42,1171	0/0:16,0:16:45.15:0,45,1353	0/0:12,0:12:36.12:0,36,1044	0/0:27,0:27:63.21:0,63,1661	0/0:24,0:24:72.25:0,72,2064	0/0:26,0:26:69.24:0,69,2100	0/0:31,0:31:84.26:0,84,2327	0/0:17,0:17:51.18:0,51,1466	0/0:19,0:19:48.16:0,48,1265	0/0:23,0:23:57.18:0,57,1670	0/0:25,0:25:69.22:0,69,1924	0/0:19,0:19:48.16:0,48,1352	0/0:14,0:14:39.13:0,39,1144	0/0:23,0:22:63.19:0,63,1810	0/0:22,0:22:63.22:0,63,1749	0/1:11,17:28:19.18:1262,0,19	1/1:6,15:21:51.17:1018,51,0	1/1:8,1:9:21.07:343,21,0
chr10	2371039	.	GGT	G	732.07	PASS	AB=0.967;AC=15;AF=0.268;AN=56;BaseQRankSum=10.412;DP=573;FS=6.711;HRun=0;HaplotypeScore=78.9164;InbreedingCoeff=0.4476;MQ=73.15;MQ0=0;MQRankSum=-2.150;QD=3.61;ReadPosRankSum=-0.391;VQSLOD=1.1489;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:12,0:12:0:0,0,0	0/0:11,0:11:27.06:0,27,412	0/0:25,0:18:25.90:0,26,395	0/0:27,0:25:41.19:0,41,592	0/0:27,0:27:69.17:0,69,1018	0/0:20,0:20:60.19:0,60,942	0/0:22,1:23:19.63:0,20,792	1/1:24,0:24:28.44:167,28,0	1/1:15,0:15:36.04:417,36,0	0/0:32,0:32:69.23:0,69,1105	0/0:18,1:19:7.60:0,8,601	0/0:25,0:25:66.21:0,66,1049	0/0:21,0:21:51.16:0,51,809	0/1:26,0:26:7.93:8,0,351	0/0:19,1:20:19.65:0,20,822	0/0:18,0:18:10.72:0,11,663	0/1:22,0:22:95.38:95,0,199	0/0:17,0:17:45.11:0,45,703	0/0:20,0:20:48.10:0,48,662	0/1:17,1:18:1.49:1,0,420	0/1:26,3:29:8.81:9,0,828	0/0:20,0:20:51.16:0,51,811	0/0:21,0:21:57.09:0,57,845	0/1:10,1:11:16.47:16,0,246	0/0:24,0:24:22.90:0,23,819	0/1:24,0:24:15.01:89,0,15	1/1:13,0:13:20.82:67,21,0	1/1:9,0:9:11.78:33,12,0
chr10	2371050	.	GT	G	186.53	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.461;DP=547;FS=12.219;HRun=1;HaplotypeScore=70.6900;InbreedingCoeff=0.9032;MQ=74.33;MQ0=1;MQRankSum=-4.025;QD=8.88;ReadPosRankSum=0.201;VQSLOD=-0.2989;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,0:6:4.53:46,5,0	0/0:10,0:10:30.10:0,30,469	0/0:24,0:17:48.05:0,48,637	0/0:31,0:29:74.86:0,75,1001	0/0:25,0:25:75.26:0,75,1188	0/0:24,0:24:69.23:0,69,1072	0/0:20,0:20:57.67:0,58,902	0/0:23,0:22:40.49:0,40,243	1/1:5,10:15:23.20:250,23,0	0/0:30,0:30:87.27:0,87,1306	0/0:19,0:19:51.57:0,52,741	0/0:23,0:23:69.23:0,69,1092	0/0:19,0:19:57.19:0,57,890	0/0:23,1:24:46.90:0,47,893	0/0:19,0:19:54.66:0,55,865	0/0:17,1:18:31.60:0,32,773	0/0:19,0:19:53.13:0,53,641	0/0:15,0:15:45.15:0,45,716	0/0:20,0:20:60.19:0,60,897	0/0:12,0:12:33.58:0,34,528	0/0:31,0:31:73.60:0,74,1111	0/0:20,0:20:60.20:0,60,925	0/0:22,0:22:66.22:0,66,1022	0/0:8,0:8:18.53:0,19,289	0/0:22,0:22:61.09:0,61,959	0/0:20,0:18:45.68:0,46,275	0/0:18,0:18:18.16:0,18,71	0/0:9,0:8:13.05:0,13,42
chr10	2371052	.	GT	G	2272.96	PASS	AB=0.980;AC=12;AF=0.214;AN=56;BaseQRankSum=7.770;DP=539;FS=5.349;HRun=1;HaplotypeScore=62.0607;InbreedingCoeff=0.7210;MQ=75.98;MQ0=1;MQRankSum=-3.044;QD=18.04;ReadPosRankSum=-1.223;VQSLOD=3.3772;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:4:0.95:0,1,2	0/0:11,0:11:13.24:0,13,401	0/0:26,0:19:44.06:0,44,512	0/0:30,0:28:62.10:0,62,780	0/0:25,0:25:75.16:0,75,967	0/0:24,0:24:69.18:0,69,925	0/0:22,0:22:57.13:0,57,838	1/1:1,22:21:62.93:726,63,0	1/1:4,10:14:28.51:238,29,0	0/0:29,0:29:81.24:0,81,1092	0/0:17,0:17:39.07:0,39,596	0/0:23,0:23:69.16:0,69,935	0/0:19,0:19:51.15:0,51,725	0/1:23,1:24:65.70:66,0,113	0/0:19,0:19:48.10:0,48,760	0/0:16,1:17:28.50:0,29,624	0/1:18,0:18:48.84:101,0,49	0/0:15,0:15:45.11:0,45,634	0/0:18,0:18:54.11:0,54,666	0/0:13,0:13:29.99:0,30,449	0/0:31,0:31:68.94:0,69,981	0/0:20,0:20:60.17:0,60,813	0/0:21,0:21:63.03:0,63,765	0/0:8,0:8:11.99:0,12,233	0/0:21,0:21:47.78:0,48,804	1/1:5,14:17:4.25:550,4,0	1/1:0,19:19:38.89:516,39,0	1/1:1,8:8:18.06:250,18,0
chr10	2372595	.	C	CA	798.88	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.969;DP=838;FS=0.000;HRun=0;HaplotypeScore=89.6881;InbreedingCoeff=0.9920;MQ=84.74;MQ0=0;MQRankSum=-1.794;QD=31.96;ReadPosRankSum=0.259;VQSLOD=3.1734;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:66,0:66:99:0,183,2560	0/0:17,0:17:51.16:0,51,698	0/0:29,0:29:70.18:0,70,946	0/0:36,0:36:89.54:0,90,1143	0/0:20,0:20:60.17:0,60,803	0/0:22,0:22:66.20:0,66,890	0/0:29,0:29:87.29:0,87,1215	0/0:44,0:44:99:0,129,1788	0/0:25,0:25:75.24:0,75,1033	0/0:36,0:36:99:0,108,1478	0/0:24,0:24:69.22:0,69,944	0/0:29,0:29:87.29:0,87,1216	0/0:23,0:23:69.22:0,69,948	0/0:26,0:26:78.25:0,78,1073	0/0:37,0:37:99:0,111,1533	0/0:38,0:38:99:0,114,1578	1/1:1,24:25:63.21:894,63,0	0/0:7,0:7:18.05:0,18,235	0/0:20,0:20:60.17:0,60,818	0/0:38,0:38:99:0,114,1556	0/0:45,0:45:99:0,129,1801	0/0:36,0:36:99:0,105,1431	0/0:34,0:34:99:0,99,1375	0/0:25,0:25:75.24:0,75,1033	0/0:26,0:26:75.16:0,75,1006	0/0:36,0:36:99:0,102,1348	0/0:31,0:30:93.27:0,93,1261	0/0:13,0:13:39.12:0,39,529
chr10	2374508	.	TG	T	3227.04	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=10.978;DP=560;FS=0.434;HRun=3;HaplotypeScore=50.6103;InbreedingCoeff=0.9881;MQ=89.23;MQ0=0;MQRankSum=-1.650;QD=31.95;ReadPosRankSum=-2.118;VQSLOD=2.6571;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:60.20:0,60,864	0/0:19,0:19:57.19:0,57,821	0/0:24,0:24:63.17:0,63,873	0/0:18,0:18:54.18:0,54,754	0/0:30,0:30:84.28:0,84,1209	0/0:25,0:25:72.22:0,72,1002	0/0:10,0:10:24.08:0,24,345	1/1:0,38:38:99:1400,114,0	0/0:18,0:18:54.18:0,54,776	0/0:20,0:20:54.18:0,54,778	0/0:17,0:17:51.17:0,51,734	0/0:16,0:16:45.15:0,45,648	0/0:15,0:15:45.15:0,45,648	0/0:19,0:19:57.19:0,57,820	0/0:20,0:20:60.20:0,60,862	0/0:14,0:14:36.10:0,36,498	0/0:22,0:22:63.21:0,63,905	0/0:9,0:9:27.03:0,27,341	0/0:19,0:19:54.17:0,54,760	0/0:19,0:19:57.19:0,57,820	0/0:21,0:21:60.20:0,60,864	0/0:14,0:14:42.14:0,42,605	0/0:28,0:28:84.28:0,84,1205	0/0:17,0:17:51.17:0,51,735	0/0:24,0:24:72.23:0,72,1017	1/1:1,17:18:10.93:575,11,0	1/1:2,30:32:78.24:964,78,0	1/1:0,13:13:36.11:446,36,0
chr10	2375539	.	TGTTA	T	1414.19	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.032;DP=631;FS=2.605;HRun=0;HaplotypeScore=104.1935;InbreedingCoeff=0.9674;MQ=58.46;MQ0=19;MQRankSum=-2.322;QD=40.41;ReadPosRankSum=0.661;VQSLOD=3.5258;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,35:34:78.19:1509,78,0	0/0:11,0:11:33.04:0,33,824	0/0:21,0:11:30.04:0,30,618	0/0:19,0:5:15.05:0,15,419	0/0:24,0:24:65.61:0,66,1589	0/0:27,0:27:78.14:0,78,2025	0/0:20,0:19:50.99:0,51,1244	0/0:30,0:29:84.27:0,84,2061	0/0:25,0:25:69.22:0,69,1838	0/0:25,0:25:72.25:0,72,2013	0/0:12,0:12:36.12:0,36,1002	0/0:28,0:28:75.24:0,75,2009	0/0:30,0:30:84.24:0,84,2152	0/0:25,0:25:66.18:0,66,1778	0/0:19,0:19:54.19:0,54,1446	0/0:19,0:19:51.18:0,51,1419	0/0:37,0:37:96.30:0,96,2548	0/0:26,0:26:78.27:0,78,2117	0/0:16,0:13:32.85:0,33,899	0/0:17,0:17:48.16:0,48,1239	0/0:46,0:46:99:0,135,3516	0/0:12,0:12:30.10:0,30,793	0/0:17,0:17:45.14:0,45,1104	0/0:24,0:24:72.25:0,72,1991	0/0:19,0:19:57.18:0,57,1478	0/0:24,0:24:72.25:0,72,1973	0/0:18,0:18:48.16:0,48,1326	0/0:5,0:5:14.92:0,15,289
chr10	2376622	.	TA	T	619.85	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.762;DP=586;FS=3.939;HRun=6;HaplotypeScore=53.9435;InbreedingCoeff=0.9397;MQ=68.85;MQ0=0;MQRankSum=-2.255;QD=22.96;ReadPosRankSum=-1.325;VQSLOD=2.5377;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,26:27:69.09:715,69,0	0/0:4,0:4:9.03:0,9,118	0/0:10,0:10:24.03:0,24,292	0/0:12,0:12:23.46:0,23,308	0/0:25,0:25:66.21:0,66,867	0/0:21,0:21:63.18:0,63,799	0/0:16,0:16:48.16:0,48,632	0/0:42,0:42:99:0,120,1557	0/0:20,0:20:60.20:0,60,790	0/0:21,0:21:54.17:0,54,700	0/0:18,0:18:51.16:0,51,658	0/0:10,0:10:30.09:0,30,381	0/0:23,0:23:66.21:0,66,869	0/0:18,0:18:51.15:0,51,656	0/0:24,0:24:69.22:0,69,895	0/0:26,0:26:75.24:0,75,987	0/0:28,0:28:78.24:0,78,1013	0/0:18,0:18:54.18:0,54,710	0/0:17,0:17:42.12:0,42,525	0/0:28,0:28:78.25:0,78,1026	0/0:14,0:14:33.11:0,33,434	0/0:23,0:23:60.19:0,60,777	0/0:36,0:36:99:0,105,1382	0/0:18,0:18:51.15:0,51,655	0/0:25,0:25:72.23:0,72,946	0/0:19,0:19:54.18:0,54,710	0/0:32,0:32:90.29:0,90,1183	0/0:11,0:11:27.09:0,27,355
chr10	2378042	.	G	GT	501.41	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=-3.416;DP=544;FS=3.726;HRun=10;HaplotypeScore=53.4031;InbreedingCoeff=0.6415;MQ=60.75;MQ0=0;MQRankSum=0.519;QD=12.54;ReadPosRankSum=0.780;VQSLOD=3.2380;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:26.96:0,27,222	0/0:4,0:5:8.03:0,8,55	0/0:8,0:8:17.86:0,18,111	0/1:12,0:10:4.99:5,0,93	0/0:26,0:26:62.90:0,63,514	0/0:19,1:20:15.95:0,16,337	0/0:8,0:9:20.01:0,20,154	0/0:31,0:31:57.42:0,57,636	0/0:16,0:16:38.95:0,39,320	0/0:26,0:26:65.69:0,66,524	0/0:23,0:23:59.91:0,60,489	0/0:17,0:18:46.96:0,47,372	0/0:22,0:22:53.92:0,54,443	0/0:11,0:12:28.97:0,29,224	0/0:19,1:20:26.99:0,27,417	0/0:21,0:21:56.93:0,57,468	1/1:4,24:27:16.97:591,17,0	0/0:15,0:15:32.94:0,33,271	0/0:16,0:16:32.93:0,33,269	0/0:34,0:34:83.87:0,84,690	0/0:6,0:6:14.97:0,15,121	0/0:18,0:18:44.94:0,45,369	0/0:12,1:14:34.98:0,35,277	0/0:20,0:20:46.98:0,47,376	0/0:15,0:15:29.93:0,30,246	0/0:40,0:42:99:0,106,834	0/0:31,2:34:24.96:0,25,607	0/0:19,0:19:48.82:0,49,396
chr10	2379020	.	C	CTCTA	3796.31	PASS	AB=0.870;AC=18;AF=0.321;AN=56;BaseQRankSum=5.173;DP=716;FS=2.048;HRun=0;HaplotypeScore=132.7147;InbreedingCoeff=0.5632;MQ=65.06;MQ0=6;MQRankSum=-6.683;QD=12.83;ReadPosRankSum=-4.940;VQSLOD=2.1754;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:26:15.18:377,15,0	0/0:11,0:11:24.02:0,24,306	0/0:33,0:18:8.82:0,9,88	0/0:17,0:13:3.01:0,3,47	1/1:13,16:33:0.53:731,1,0	0/1:15,8:23:51.38:337,0,51	1/1:6,12:18:12.04:251,12,0	1/1:57,0:57:71.89:718,72,0	0/1:24,0:24:25.85:286,0,26	0/0:28,0:28:48.15:0,48,719	0/0:18,0:18:32.93:0,33,399	0/0:29,0:30:60.17:0,60,866	0/0:29,0:30:51.14:0,51,737	0/0:29,0:30:63.15:0,63,844	0/0:28,0:28:69.15:0,69,941	0/0:23,0:23:42.11:0,42,598	1/1:18,0:18:14.03:124,14,0	0/0:10,0:11:5.06:0,5,324	0/1:22,1:23:50.53:51,0,159	0/0:34,0:34:54.05:0,54,774	0/0:24,0:26:60.16:0,60,858	0/0:27,0:27:54.13:0,54,762	0/0:23,0:23:36.11:0,36,545	0/0:15,0:16:33.11:0,33,494	0/0:34,0:35:75.21:0,75,1095	0/1:18,0:25:23.44:265,0,23	1/1:14,0:29:12.04:198,12,0	1/1:11,0:20:27.09:459,27,0
chr10	2379043	.	T	TATCTATCTATCC	3624.89	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=2.233;DP=760;FS=7.286;HRun=0;HaplotypeScore=240.2570;InbreedingCoeff=0.0737;MQ=55.40;MQ0=13;MQRankSum=-7.271;QD=16.86;ReadPosRankSum=0.651;VQSLOD=1.6417;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:29:41.33:617,0,41	0/0:15,0:15:42.03:0,42,759	0/0:41,0:16:8.01:0,8,325	0/0:25,0:17:17.05:0,17,306	0/0:35,0:35:68.67:0,69,591	0/0:18,0:18:27.99:0,28,274	0/0:23,0:23:30.13:0,30,257	0/1:53,0:53:99:253,0,475	1/1:7,21:32:21.07:1215,21,0	0/0:27,0:27:72.16:0,72,1729	0/0:26,0:26:72.03:0,72,1152	0/0:33,0:33:84.17:0,84,2061	0/0:30,0:30:75.12:0,75,1756	0/0:29,0:29:75.19:0,75,1881	0/0:34,0:34:90.13:0,90,2076	0/0:21,0:21:51.11:0,51,1325	0/1:15,0:15:15.99:124,0,16	0/1:15,0:15:9.88:10,0,725	0/0:24,0:23:40.90:0,41,446	0/0:36,0:36:93.09:0,93,1900	0/0:25,0:25:69.11:0,69,1895	0/0:31,0:31:75.12:0,75,1743	0/0:17,0:17:39.07:0,39,1196	0/0:20,0:20:45.10:0,45,1147	0/0:34,0:34:75.21:0,75,2356	0/1:20,0:20:99:337,0,251	0/1:33,0:33:99:260,0,285	0/1:18,0:17:94.87:810,0,95
chr10	2379262	.	CAG	C	4725.83	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=12.023;DP=720;FS=0.000;HRun=0;HaplotypeScore=84.0441;InbreedingCoeff=0.9992;MQ=88.57;MQ0=0;MQRankSum=-3.202;QD=43.76;ReadPosRankSum=-0.786;VQSLOD=5.6949;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,132,2637	0/0:12,0:12:36.11:0,36,679	0/0:30,0:30:87.28:0,87,1665	0/0:23,0:23:65.89:0,66,1261	0/0:24,0:24:72.22:0,72,1391	0/0:34,0:34:99:0,102,1999	0/0:20,0:20:60.19:0,60,1178	1/1:0,34:34:99:1552,99,0	0/0:28,0:28:84.29:0,84,1688	0/0:27,0:27:81.25:0,81,1541	0/0:29,0:29:87.28:0,87,1695	0/0:30,0:30:90.28:0,90,1756	0/0:33,0:33:99:0,99,1925	0/0:19,0:19:57.18:0,57,1121	0/0:31,0:31:93.31:0,93,1853	0/0:25,0:25:75.23:0,75,1451	0/0:12,0:12:36.12:0,36,731	0/0:8,0:8:24.06:0,24,447	0/0:25,0:25:75.25:0,75,1486	0/0:26,0:26:78.26:0,78,1523	0/0:23,0:23:69.22:0,69,1350	0/0:28,0:28:84.27:0,84,1652	0/0:29,0:29:87.30:0,87,1765	0/0:23,0:23:66.21:0,66,1288	0/0:29,0:29:84.29:0,84,1691	1/1:1,30:31:29.28:1271,29,0	1/1:0,26:25:72.25:1171,72,0	1/1:0,17:17:45.15:733,45,0
chr10	2381511	.	T	TG	7631.93	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-15.541;DP=582;FS=1.873;HRun=0;HaplotypeScore=51.8856;InbreedingCoeff=0.9967;MQ=72.00;MQ0=0;MQRankSum=0.023;QD=40.60;ReadPosRankSum=-0.643;VQSLOD=4.8677;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,27:28:77.75:1130,78,0	0/0:10,0:10:30.08:0,30,389	0/0:10,0:10:27:0,27,339	0/0:10,0:8:18.46:0,18,227	0/0:26,0:26:78.25:0,78,1067	0/0:23,0:23:69.21:0,69,928	0/0:15,0:15:45.13:0,45,597	1/1:0,38:38:99:1499,114,0	1/1:0,22:22:66.22:988,66,0	0/0:22,0:22:66.22:0,66,923	0/0:24,0:24:69.22:0,69,947	0/0:17,0:17:51.15:0,51,683	0/0:17,0:17:51.17:0,51,713	0/0:19,0:19:57.18:0,57,779	0/0:13,0:13:39.12:0,39,528	0/0:25,0:25:69.23:0,69,964	1/1:1,26:27:69.15:1004,69,0	0/0:6,0:6:18.06:0,18,251	0/0:25,0:25:75.23:0,75,1018	0/0:26,0:26:75.21:0,75,983	0/0:15,0:15:45.13:0,45,598	0/0:23,0:23:69.20:0,69,915	0/0:24,0:24:69.22:0,69,948	0/0:10,0:10:27.05:0,27,355	0/0:34,0:34:99:0,102,1411	1/1:2,27:29:42.32:1127,42,0	1/1:0,31:31:87.29:1301,87,0	1/1:0,13:13:39.13:583,39,0
chr10	2383259	.	GGTGTGTGTGTGTGTGTGTGTGTGT	G	2809.32	PASS	AB=0.720;AC=9;AF=0.161;AN=56;BaseQRankSum=4.926;DP=538;FS=0.768;HRun=0;HaplotypeScore=292.6692;InbreedingCoeff=0.7213;MQ=63.89;MQ0=6;MQRankSum=-6.797;QD=30.87;ReadPosRankSum=1.469;VQSLOD=1.8351;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:38:48.16:0,48,2790	0/0:15,0:16:23.61:0,24,1934	0/0:19,0:14:6.02:0,6,273	0/0:14,0:12:12.04:0,12,431	0/0:13,0:13:24.07:0,24,1979	0/0:18,0:18:42.14:0,42,3410	0/0:20,0:21:43.38:0,43,3215	1/1:29,0:28:4.26:147,4,0	1/1:6,0:19:24.08:1341,24,0	0/0:24,0:24:36.12:0,36,2896	0/0:15,0:15:21.05:0,21,1556	0/0:17,0:17:30.10:0,30,2558	0/0:15,0:18:30.57:0,31,2543	0/0:15,0:15:27.09:0,27,2468	0/0:19,0:21:30.09:0,30,2820	0/0:12,0:14:21.07:0,21,1913	0/0:14,0:13:21.13:0,21,1422	0/0:17,0:20:42.07:0,42,2744	0/0:19,0:19:20.43:0,20,1538	0/0:21,0:22:28.63:0,29,2142	0/0:36,0:34:65.49:0,65,4692	0/0:18,0:18:27.08:0,27,1933	0/0:12,0:12:24.07:0,24,1922	0/0:23,0:24:43.19:0,43,3938	0/0:16,0:19:33.11:0,33,3209	0/1:11,7:17:70.60:588,0,71	1/1:8,10:19:5.03:499,5,0	1/1:2,4:6:6.02:378,6,0
chr10	2384224	.	A	ATGCT	6163.33	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-10.083;DP=684;FS=6.640;HRun=0;HaplotypeScore=99.7597;InbreedingCoeff=0.9917;MQ=74.93;MQ0=1;MQRankSum=0.740;QD=35.02;ReadPosRankSum=-1.304;VQSLOD=4.2904;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:9,22:33:42.14:981,42,0	0/0:12,0:12:36.11:0,36,588	0/0:25,0:23:37.39:0,37,638	0/0:24,0:21:42.08:0,42,602	0/0:24,0:24:57.16:0,57,893	0/0:27,0:27:78.21:0,78,1272	0/0:12,0:12:30.07:0,30,428	1/1:10,26:37:87.17:1282,87,0	1/1:3,12:16:15.05:370,15,0	0/0:30,0:30:78.24:0,78,1227	0/0:32,0:32:75.17:0,75,1131	0/0:20,0:20:54.15:0,54,839	0/0:26,0:26:72.23:0,72,1185	0/0:19,0:19:57.13:0,57,867	0/0:23,0:23:63.17:0,63,974	0/0:17,0:17:51.16:0,51,845	1/1:13,0:13:27.01:449,27,0	0/0:25,0:25:66.21:0,66,1075	0/0:26,0:26:51.11:0,51,696	0/0:47,0:47:99:0,123,2022	0/0:12,0:11:33.10:0,33,533	0/0:30,0:30:81.26:0,81,1347	0/0:24,0:24:69.22:0,69,1139	0/0:23,0:23:57.12:0,57,893	0/0:30,0:30:72.23:0,72,1177	1/1:7,22:29:14.18:1270,14,0	1/1:8,28:36:54.18:1358,54,0	1/1:0,12:12:18.06:453,18,0
chr10	2384263	.	CA	C	167.31	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.370;DP=659;FS=0.000;HRun=1;HaplotypeScore=74.9815;InbreedingCoeff=0.9951;MQ=68.73;MQ0=2;MQRankSum=-0.526;QD=16.73;ReadPosRankSum=-0.314;VQSLOD=3.5112;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:78.26:0,78,1226	0/0:14,0:14:42.13:0,42,645	0/0:27,0:21:24.73:0,25,657	0/0:21,0:18:32.36:0,32,485	0/0:25,0:25:75.26:0,75,1196	0/0:30,0:30:90.29:0,90,1409	0/0:16,0:16:48.15:0,48,743	0/0:23,0:23:63.21:0,63,1006	0/0:18,0:18:51.17:0,51,815	0/0:25,0:25:75.19:0,75,1169	0/0:23,0:23:66.21:0,66,1021	0/0:20,0:20:60.17:0,60,912	0/0:29,0:29:87.28:0,87,1357	0/0:27,0:27:81.26:0,81,1263	0/0:27,0:27:81.28:0,81,1295	0/0:17,0:17:51.14:0,51,768	1/1:0,10:10:23.57:260,24,0	0/0:21,0:21:60.18:0,60,934	0/0:20,0:20:57.18:0,57,888	0/0:43,0:43:99:0,129,2058	0/0:20,0:20:60.19:0,60,932	0/0:28,0:28:84.24:0,84,1272	0/0:27,0:27:78.24:0,78,1197	0/0:20,0:20:60.20:0,60,955	0/0:29,0:29:87.28:0,87,1359	0/0:26,0:26:78.24:0,78,1220	0/0:32,0:32:90.30:0,90,1412	0/0:10,0:10:30.10:0,30,476
chr10	2387181	.	AAAGGGAAAGGGAAAGG	A	916.73	PASS	AB=0.741;AC=1;AF=0.018;AN=56;BaseQRankSum=5.493;DP=744;FS=1.175;HRun=0;HaplotypeScore=291.1074;InbreedingCoeff=-0.0183;MQ=63.20;MQ0=25;MQRankSum=-3.645;QD=45.84;ReadPosRankSum=0.647;VQSLOD=2.9050;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:24:48.15:0,48,2530	0/0:8,0:8:24.08:0,24,1688	0/0:43,0:17:35.59:0,36,796	0/0:53,0:28:66.31:0,66,1177	0/0:24,0:24:72.25:0,72,4376	0/0:22,0:21:63.20:0,63,3126	0/0:26,0:24:72.24:0,72,3374	0/0:25,0:18:51.05:0,51,1952	0/1:13,7:20:99:991,0,155	0/0:31,0:29:87.30:0,87,5405	0/0:22,0:22:63.22:0,63,4253	0/0:36,0:36:99:0,103,6487	0/0:34,0:34:99:0,102,5991	0/0:21,0:21:63.22:0,63,3517	0/0:31,0:31:93.32:0,93,5315	0/0:38,0:38:99:0,114,6895	0/0:36,0:36:99:0,108,5354	0/0:15,0:15:45.15:0,45,2767	0/0:23,0:18:54.18:0,54,2415	0/0:21,0:19:57.19:0,57,2888	0/0:41,0:38:99:0,114,6109	0/0:19,0:19:57.20:0,57,3891	0/0:15,0:15:45.15:0,45,3185	0/0:26,0:25:75.26:0,75,4237	0/0:17,0:17:51.15:0,51,2800	0/0:39,0:39:99:0,117,5728	0/0:21,0:21:41.99:0,42,2194	0/0:12,0:11:30.10:0,30,1287
chr10	2387197	.	G	GGAAAGGGAAAGA	6037.53	PASS	AB=1.000;AC=12;AF=0.214;AN=56;BaseQRankSum=-0.545;DP=726;FS=4.088;HRun=0;HaplotypeScore=222.2788;InbreedingCoeff=0.7850;MQ=63.88;MQ0=21;MQRankSum=-3.331;QD=34.11;ReadPosRankSum=-3.092;VQSLOD=3.8792;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:24:24.08:371,24,0	0/0:8,0:8:21.06:0,21,568	0/0:40,0:20:44.02:0,44,430	0/0:38,0:20:19.23:0,19,292	0/0:30,0:30:77.93:0,78,1129	0/0:22,0:21:54.04:0,54,854	0/0:24,0:22:60.09:0,60,1041	1/1:30,0:24:57.08:627,57,0	0/1:17,0:17:99:174,0,360	0/0:29,0:27:69.17:0,69,1620	0/0:25,0:25:66.14:0,66,1561	0/0:34,0:34:81.20:0,81,1999	0/0:30,0:30:78.17:0,78,1875	0/0:18,0:18:51.11:0,51,1238	0/0:30,0:30:84.15:0,84,1767	0/0:35,0:35:96.20:0,96,2206	0/1:34,0:34:99:253,0,977	0/0:14,0:14:33.08:0,33,816	0/0:29,0:25:75.08:0,75,1189	0/0:25,0:24:61.89:0,62,1078	0/0:39,0:37:99:0,107,1970	0/0:24,0:24:63.10:0,63,1531	0/0:15,0:15:41.99:0,42,1088	0/0:23,0:22:63.05:0,63,1393	0/0:17,0:17:51.08:0,51,909	1/1:11,24:39:37.63:2832,38,0	1/1:7,12:22:27.09:1410,27,0	1/1:10,0:10:26.89:371,27,0
chr10	2387988	.	TTCTCTC	T	1379.34	PASS	AB=0.746;AC=9;AF=0.161;AN=56;BaseQRankSum=4.454;DP=372;FS=13.276;HRun=0;HaplotypeScore=80.8450;InbreedingCoeff=0.4908;MQ=67.02;MQ0=8;MQRankSum=-5.118;QD=19.99;ReadPosRankSum=1.397;VQSLOD=2.2350;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:4,12:16:6.92:278,0,7	0/0:2,0:3:6.02:0,6,133	0/0:33,0:15:15.60:0,16,245	0/0:46,0:21:28.77:0,29,399	0/0:7,0:7:12.03:0,12,273	0/0:8,0:8:15.05:0,15,377	0/0:16,0:16:39.12:0,39,929	1/1:9,9:18:23.89:381,24,0	1/1:5,8:13:15.05:322,15,0	0/0:6,0:6:18.06:0,18,415	0/0:6,0:6:15.05:0,15,337	0/0:17,0:17:39.13:0,39,890	0/0:12,0:13:33.10:0,33,909	0/0:17,0:17:27.96:0,28,569	0/0:12,0:12:24.08:0,24,712	0/0:17,0:17:35.48:0,35,877	0/0:3,0:6:2.26:0,2,16	0/0:3,0:3:6.02:0,6,152	0/0:18,0:19:39.08:0,39,776	0/0:7,0:7:6.02:0,6,149	0/0:24,0:24:42.14:0,42,1122	0/0:11,0:12:30.10:0,30,716	0/0:7,0:6:9.02:0,9,176	0/0:14,0:16:30.10:0,30,713	0/0:6,0:6:6.02:0,6,129	0/1:5,5:10:23.77:217,0,24	1/1:1,4:5:12.04:247,12,0	0/1:6,0:5:22.29:86,0,22
chr10	2388494	.	GTGTA	G	704.88	PASS	AB=0.931;AC=9;AF=0.173;AN=52;BaseQRankSum=6.660;DP=811;FS=6.817;HRun=0;HaplotypeScore=129.2097;InbreedingCoeff=0.0597;MQ=64.49;MQ0=5;MQRankSum=1.510;QD=3.01;ReadPosRankSum=1.036;VQSLOD=1.8168;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:21,14:35:36.12:558,36,0	0/0:9,0:9:15.05:0,15,353	./.	./.	0/0:40,0:40:75.26:0,75,1700	0/1:23,2:25:53.97:54,0,674	0/0:28,0:28:26.60:0,27,577	0/0:36,0:36:21.03:0,21,274	0/0:14,0:24:36.11:0,36,654	0/0:40,0:40:51.16:0,51,1105	0/1:17,3:20:59.89:60,0,602	0/0:31,0:31:54.17:0,54,1201	0/0:28,0:28:54.15:0,54,1155	0/0:25,2:27:4.67:0,5,1011	0/0:35,0:35:51.17:0,51,1186	0/0:40,0:40:63.22:0,63,1481	0/0:13,0:29:45.15:0,45,821	0/0:22,0:22:24.08:0,24,535	0/1:21,1:22:25.43:25,0,388	0/1:33,2:35:35.80:36,0,1059	0/1:25,3:28:97.38:97,0,636	0/0:22,0:22:42.14:0,42,961	0/1:33,1:34:1.36:1,0,858	0/0:21,0:21:36.12:0,36,824	0/0:36,0:35:51.16:0,51,1153	0/1:33,2:35:10.24:10,0,1199	0/0:30,1:31:7.64:0,8,1035	0/0:16,0:16:12:0,12,188
chr10	2389761	.	G	GC	1286.46	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-8.541;DP=822;FS=1.453;HRun=2;HaplotypeScore=77.5402;InbreedingCoeff=0.9995;MQ=88.98;MQ0=0;MQRankSum=-1.259;QD=32.99;ReadPosRankSum=4.353;VQSLOD=3.7753;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:60,0:60:99:0,171,2089	0/0:13,0:13:39.12:0,39,483	0/0:34,0:34:81.21:0,81,975	0/0:26,0:26:66.65:0,67,795	0/0:34,0:34:99:0,99,1211	0/0:30,0:30:81.25:0,81,1004	0/0:19,0:19:54.13:0,54,642	0/0:26,0:26:69.20:0,69,833	0/0:27,0:27:78.24:0,78,966	0/0:33,0:33:96.27:0,96,1170	0/0:28,0:28:81.22:0,81,985	0/0:32,0:32:93.29:0,93,1153	0/0:35,0:35:99:0,105,1260	0/0:34,0:34:96.25:0,96,1160	0/0:32,0:32:93.29:0,93,1152	0/0:20,0:20:54.14:0,54,653	1/1:1,38:39:96.32:1381,96,0	0/0:21,0:20:57.18:0,57,706	0/0:14,0:13:36.07:0,36,417	0/0:24,0:24:66.19:0,66,805	0/0:34,0:34:99:0,102,1263	0/0:37,0:37:99:0,108,1326	0/0:28,0:28:75.24:0,75,928	0/0:34,0:34:99:0,102,1264	0/0:34,0:34:99:0,102,1251	0/0:30,0:30:84.26:0,84,1030	0/0:33,0:33:90.28:0,90,1113	0/0:11,0:11:33.10:0,33,409
chr10	2391281	.	TTGTG	T	6246.27	PASS	AC=36;AF=0.667;AN=54;BaseQRankSum=7.486;DP=710;FS=5.530;HRun=0;HaplotypeScore=131.6429;InbreedingCoeff=0.8631;MQ=69.47;MQ0=7;MQRankSum=-0.189;QD=14.33;ReadPosRankSum=4.088;VQSLOD=4.1342;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:34:14.97:0,15,202	1/1:4,4:9:9.02:122,9,0	0/0:42,0:31:1.25:0,1,3	./.	1/1:19,10:33:30.05:406,30,0	1/1:14,11:26:5.58:223,6,0	1/1:15,8:24:18.05:263,18,0	0/0:35,0:35:27.96:0,28,453	1/1:7,12:21:27.07:364,27,0	0/0:19,0:19:25.32:0,25,464	0/0:20,0:22:38.85:0,39,796	1/1:15,9:24:21.54:331,22,0	1/1:6,8:16:21.06:291,21,0	1/1:12,14:26:30.10:471,30,0	1/1:16,14:32:26.64:534,27,0	1/1:15,11:27:35.91:546,36,0	1/1:13,18:31:8.49:579,8,0	0/0:26,0:27:53.91:0,54,999	1/1:22,0:23:3:28,3,0	1/1:13,3:19:24.06:319,24,0	1/1:14,4:18:3.01:47,3,0	1/1:15,8:25:24.08:376,24,0	1/1:12,9:22:20.86:311,21,0	1/1:13,21:35:32.65:648,33,0	1/1:15,7:24:27.08:386,27,0	0/0:28,0:31:39.74:0,40,711	0/0:26,0:27:44.87:0,45,898	0/0:5,0:3:9.03:0,9,208
chr10	2391810	.	T	TA	486.52	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.469;DP=673;FS=0.731;HRun=10;HaplotypeScore=70.4575;InbreedingCoeff=0.9211;MQ=68.58;MQ0=0;MQRankSum=0.135;QD=21.15;ReadPosRankSum=-0.172;VQSLOD=4.3609;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:77.76:0,78,620	0/0:11,0:13:29.45:0,29,224	0/0:20,0:18:8.65:0,9,160	0/0:11,0:10:14.72:0,15,109	0/0:32,0:33:70.92:0,71,569	0/0:29,0:29:74.87:0,75,609	0/0:21,1:22:27.90:0,28,428	0/0:31,0:31:74.86:0,75,610	0/0:27,0:27:62.89:0,63,513	0/0:24,1:25:50.94:0,51,476	0/0:23,0:25:61.05:0,61,475	0/0:25,0:26:61.93:0,62,495	0/0:21,0:22:49.92:0,50,392	0/0:23,0:24:55.94:0,56,446	0/0:26,0:28:67.90:0,68,538	0/0:16,0:16:38.95:0,39,320	1/1:4,19:23:38.53:581,39,0	0/0:14,0:14:35.94:0,36,295	0/0:17,0:17:41.92:0,42,342	0/0:27,0:27:68.80:0,69,557	0/0:22,0:23:61.93:0,62,492	0/0:26,0:27:60.39:0,60,571	0/0:28,1:29:39.90:0,40,531	0/0:27,0:30:72.91:0,73,566	0/0:25,0:25:56.90:0,57,466	0/0:25,0:25:62.88:0,63,513	0/0:28,0:30:46.60:0,47,502	0/0:18,1:20:20.98:0,21,368
chr10	2392618	.	A	ATTCCTTCCTTCTTTCC	8841.03	PASS	AB=0.739;AC=13;AF=0.232;AN=56;BaseQRankSum=-1.354;DP=604;FS=11.406;HRun=0;HaplotypeScore=240.0525;InbreedingCoeff=0.8343;MQ=61.45;MQ0=2;MQRankSum=-4.716;QD=52.63;ReadPosRankSum=-3.540;VQSLOD=2.5381;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:11,0:17:92.86:504,0,93	0/0:4,0:4:5.99:0,6,50	0/0:15,0:8:17.97:0,18,169	0/0:16,0:12:24.04:0,24,244	0/0:31,0:31:72.16:0,72,2044	0/0:38,0:38:90.14:0,90,2578	0/0:27,0:27:68.24:0,68,1745	1/1:43,0:43:99:1380,111,0	1/1:16,0:16:18.06:1165,18,0	0/0:17,0:17:45.07:0,45,1365	0/0:17,0:17:45.10:0,45,1381	0/0:15,0:15:36.08:0,36,1181	0/0:25,0:25:62.99:0,63,1745	0/0:22,0:22:51.08:0,51,1240	0/0:25,0:25:60.04:0,60,1264	0/0:21,0:21:51.09:0,51,1452	1/1:23,0:23:1.78:204,2,0	0/0:19,0:19:36.66:0,37,886	0/0:20,0:19:48.09:0,48,1262	0/0:23,0:23:60.14:0,60,2060	0/0:17,0:17:39.11:0,39,1203	0/0:17,0:17:45.09:0,45,1395	0/0:25,0:25:57.13:0,57,1642	0/0:17,0:17:36.04:0,36,1100	0/0:25,0:25:66.16:0,66,2154	1/1:28,0:28:75.18:1877,75,0	1/1:8,19:31:51.18:2830,51,0	1/1:10,0:10:30.07:880,30,0
chr10	2392622	.	C	CTTCCTTCTTTC	3861.77	PASS	AB=1.000;AC=10;AF=0.179;AN=56;BaseQRankSum=11.320;DP=605;FS=1.125;HRun=0;HaplotypeScore=190.1641;InbreedingCoeff=0.4903;MQ=60.11;MQ0=4;MQRankSum=-9.679;QD=21.57;ReadPosRankSum=-1.635;VQSLOD=2.7169;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:17,0:17:99:260,0,292	0/0:4,0:4:9:0,9,105	0/0:16,0:8:18.06:0,18,293	0/0:16,0:11:24.07:0,24,354	0/0:31,0:31:72.23:0,72,2013	0/0:36,0:36:99:0,99,2530	0/0:26,0:26:67.93:0,68,1780	0/1:43,0:43:99:138,0,281	1/1:5,1:23:18.06:722,18,0	0/0:17,0:17:48.16:0,48,1310	0/0:16,0:16:45.15:0,45,1274	0/0:15,0:15:36.12:0,36,1018	0/0:24,0:24:66.19:0,66,1757	0/0:20,0:20:57.17:0,57,1390	0/0:24,0:24:63.21:0,63,1504	0/0:20,0:20:51.17:0,51,1405	1/1:2,0:29:12.04:318,12,0	0/0:18,0:18:48.11:0,48,1168	0/0:22,0:19:54.15:0,54,1285	0/0:24,0:24:63.17:0,63,1802	0/0:15,0:15:39.13:0,39,1131	0/0:17,0:17:48.15:0,48,1299	0/0:23,0:23:57.18:0,57,1622	0/0:16,0:16:36.12:0,36,1028	0/0:26,0:26:69.22:0,69,1994	0/1:28,0:28:99:580,0,162	1/1:29,0:29:49.37:1513,49,0	0/1:10,0:10:32.99:331,0,33
chr10	2392749	.	A	AAG	438.62	PASS	AB=0.906;AC=18;AF=0.360;AN=50;BaseQRankSum=2.819;DP=537;FS=4.958;HRun=0;HaplotypeScore=94.8217;InbreedingCoeff=0.2802;MQ=64.50;MQ0=15;MQRankSum=-1.065;QD=1.90;ReadPosRankSum=-0.098;VQSLOD=1.5151;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:18,0:18:18.14:19,0,18	./.	./.	./.	1/1:18,4:22:5.90:89,6,0	0/0:20,0:20:14.61:0,15,144	0/0:13,0:13:1.83:0,2,4	1/1:29,0:29:4.12:18,4,0	1/1:22,0:22:8.94:102,9,0	0/0:27,0:27:5.94:0,6,49	0/0:14,0:14:5.90:0,6,62	0/1:11,5:17:16.22:38,0,16	0/1:16,1:17:62.84:63,0,67	0/1:14,7:20:30.23:36,0,30	0/0:18,0:17:14.72:0,15,156	0/0:23,0:23:25.70:0,26,206	0/0:21,0:24:9.38:0,9,65	0/0:22,0:21:2.21:0,2,177	0/0:15,0:14:3.46:0,3,24	0/0:13,0:13:2.60:0,3,30	0/1:15,0:15:0.10:0,0,0	0/0:15,0:15:9.01:0,9,90	0/1:14,0:14:12.22:12,0,56	0/0:12,0:12:11.82:0,12,107	0/0:26,0:25:14.26:0,14,128	1/1:21,0:21:6:54,6,0	1/1:23,0:22:17.20:135,17,0	1/1:8,0:10:3:26,3,0
chr10	2395845	.	A	ATT	2832.45	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=10.478;DP=565;FS=1.105;HRun=7;HaplotypeScore=78.8347;InbreedingCoeff=0.9935;MQ=70.90;MQ0=0;MQRankSum=-3.388;QD=13.82;ReadPosRankSum=3.463;VQSLOD=0.3111;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,0:37:78.45:279,78,0	0/0:5,0:5:15.04:0,15,174	0/0:11,0:11:17.95:0,18,182	0/0:10,0:10:26.09:0,26,281	1/1:3,27:30:78.27:1269,78,0	0/0:27,0:27:72.19:0,72,827	0/0:18,0:18:51.15:0,51,594	1/1:6,0:33:60.64:223,61,0	1/1:0,17:18:36.12:587,36,0	0/0:28,0:28:78.23:0,78,909	0/0:24,0:24:66.19:0,66,769	0/0:24,0:24:66.19:0,66,769	0/0:21,0:21:54.15:0,54,629	0/0:19,0:19:48.14:0,48,559	0/0:19,0:19:57.16:0,57,654	0/0:17,0:17:51.15:0,51,594	1/1:1,0:29:62.38:220,62,0	0/0:8,0:8:24.07:0,24,277	0/0:16,0:16:36.08:0,36,410	0/0:23,0:23:51.12:0,51,584	0/0:24,0:24:51.14:0,51,594	0/0:8,0:8:24.07:0,24,280	0/0:20,0:20:57.15:0,57,653	0/0:20,0:20:51.13:0,51,584	0/0:18,0:18:48.11:0,48,538	1/1:3,0:27:60.38:225,60,0	1/1:1,0:22:49.78:175,50,0	1/1:1,0:8:17.47:61,17,0
chr10	2399801	.	A	AT	1140.14	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-7.024;DP=722;FS=5.839;HRun=9;HaplotypeScore=69.5797;InbreedingCoeff=0.9918;MQ=73.13;MQ0=0;MQRankSum=-0.921;QD=22.36;ReadPosRankSum=2.575;VQSLOD=4.6448;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,46:51:91.26:1235,91,0	0/0:9,0:9:26.99:0,27,234	0/0:21,0:21:46.20:0,46,363	0/0:18,0:17:29.77:0,30,243	0/0:43,0:43:99:0,113,958	0/0:29,1:30:47.80:0,48,644	0/0:21,0:21:50.97:0,51,439	0/0:30,0:30:68.09:0,68,597	0/0:22,0:22:39.47:0,39,489	0/0:40,0:40:99:0,117,1015	0/0:32,0:32:92.64:0,93,773	0/0:21,0:21:59.99:0,60,521	0/0:25,0:25:62.97:0,63,547	0/0:30,0:30:77.97:0,78,676	0/0:27,0:27:71.96:0,72,621	0/0:26,0:26:77.96:0,78,671	0/0:20,0:22:62.03:0,62,526	0/0:22,0:22:56.96:0,57,495	0/0:19,0:19:18.95:0,19,334	0/0:34,0:34:86.95:0,87,751	0/0:29,0:29:74.55:0,75,631	0/0:21,0:21:56.99:0,57,495	0/0:25,0:25:59.85:0,60,503	0/0:17,0:17:38.97:0,39,338	0/0:17,0:17:44.98:0,45,391	0/0:28,0:28:77.89:0,78,662	0/0:26,0:26:68.02:0,68,579	0/0:15,0:15:44.96:0,45,384
chr10	2400923	.	T	TCA	1085.62	PASS	AB=0.926;AC=24;AF=0.462;AN=52;BaseQRankSum=3.717;DP=626;FS=0.000;HRun=0;HaplotypeScore=108.8119;InbreedingCoeff=0.2605;MQ=69.21;MQ0=5;MQRankSum=-4.393;QD=3.31;ReadPosRankSum=-4.228;VQSLOD=1.0295;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:36,1:37:22.34:246,22,0	0/0:11,0:11:12.02:0,12,123	./.	./.	0/0:21,0:22:15.33:0,15,143	0/0:21,0:21:9:0,9,89	0/0:22,0:25:23.51:0,24,192	1/1:35,0:35:45.97:266,46,0	0/0:26,0:29:32.58:0,33,302	0/1:14,3:16:24.22:42,0,24	0/1:15,0:15:30.48:30,0,57	0/1:12,7:20:23.48:80,0,23	1/1:15,7:22:15.02:199,15,0	1/1:21,0:21:6.02:83,6,0	0/1:18,0:22:21.02:21,0,146	0/0:23,0:24:17.87:0,18,176	1/1:19,0:19:6.35:34,6,0	0/1:16,2:18:32.62:33,0,83	0/0:15,0:15:3.01:0,3,33	0/1:17,1:18:26.48:26,0,145	0/0:31,0:31:6:0,6,64	0/1:27,0:27:24.25:24,0,123	0/1:17,0:17:5.81:6,0,56	0/0:36,0:40:23.88:0,24,242	0/0:22,0:22:24.06:0,24,259	1/1:22,0:20:7.32:73,7,0	1/1:11,0:11:5.20:44,5,0	1/1:6,0:6:6.47:56,6,0
chr10	2402641	.	ATG	A	1552.53	PASS	AB=0.896;AC=15;AF=0.268;AN=56;BaseQRankSum=8.325;DP=987;FS=0.901;HRun=0;HaplotypeScore=117.9343;InbreedingCoeff=-0.0212;MQ=56.49;MQ0=18;MQRankSum=1.700;QD=2.91;ReadPosRankSum=2.754;VQSLOD=2.0776;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:27,34:63:62.43:654,62,0	0/1:18,1:19:10.02:10,0,351	0/0:41,0:16:3.45:0,3,22	0/0:52,0:20:9.01:0,9,99	0/1:28,1:29:24.90:25,0,505	0/1:20,6:26:99:185,0,428	0/1:27,2:29:20.36:20,0,514	0/0:48,0:47:36.67:0,37,371	0/1:38,4:42:80.58:81,0,919	0/1:22,5:25:99:121,0,283	0/0:21,1:22:10.94:0,11,571	0/0:40,0:41:71.94:0,72,992	0/1:35,1:36:4.17:4,0,836	0/1:30,14:43:99:199,0,622	0/1:35,5:40:93.49:93,0,815	0/0:16,0:26:26.98:0,27,293	0/0:19,0:32:11.94:0,12,93	0/0:32,2:34:31.98:0,32,899	0/0:21,0:21:18.49:0,18,239	0/0:27,0:27:44.80:0,45,680	0/1:85,3:90:42.37:42,0,1607	0/0:34,2:36:22.98:0,23,750	0/0:21,0:21:30.08:0,30,433	0/1:48,7:56:15.62:16,0,1602	1/1:17,13:31:26.74:267,27,0	0/0:17,0:32:60.84:0,61,563	0/0:6,0:13:14.96:0,15,123	0/0:2,0:5:5.97:0,6,46
chr10	2408239	.	AACAC	A	338.83	PASS	AB=0.866;AC=12;AF=0.231;AN=52;BaseQRankSum=4.322;DP=592;FS=0.000;HRun=0;HaplotypeScore=102.6632;InbreedingCoeff=0.3275;MQ=68.94;MQ0=11;MQRankSum=-1.477;QD=1.73;ReadPosRankSum=-0.431;VQSLOD=1.6029;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:28:9:81,9,0	0/0:9,0:10:11.51:0,12,204	./.	./.	0/0:14,0:14:9.03:0,9,211	1/1:11,6:18:9.02:121,9,0	1/1:17,3:21:8.94:84,9,0	0/0:35,0:35:14.99:0,15,218	0/0:14,0:15:14.77:0,15,212	0/0:20,0:19:24.02:0,24,382	0/1:11,1:13:25.59:26,0,338	0/0:15,0:15:18.04:0,18,346	0/0:16,0:16:18.01:0,18,269	0/0:22,0:23:21.28:0,21,381	0/1:20,2:26:41.74:76,0,42	0/0:16,0:19:20.54:0,21,315	0/1:18,2:21:2.53:67,0,3	0/1:16,1:17:16.31:16,0,506	0/0:17,0:17:9.03:0,9,208	0/0:16,0:16:15.05:0,15,276	0/0:41,2:41:7.80:0,8,1002	0/1:18,1:23:16.82:17,0,456	0/0:16,0:16:21.07:0,21,425	0/1:24,2:28:1.63:2,0,831	0/0:23,0:23:20.78:0,21,324	0/0:22,0:22:25.23:0,25,338	0/0:17,0:15:6.91:0,7,102	0/0:8,0:8:12.04:0,12,199
chr10	2408280	.	A	ACACG	767.13	PASS	AB=0.590;AC=6;AF=0.107;AN=56;BaseQRankSum=-2.699;DP=694;FS=4.121;HRun=0;HaplotypeScore=132.5471;InbreedingCoeff=0.5166;MQ=65.76;MQ0=19;MQRankSum=0.934;QD=8.16;ReadPosRankSum=-1.936;VQSLOD=2.5984;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:25:54.21:0,54,401	0/0:16,0:16:37.30:0,37,366	0/0:29,0:16:21.67:0,22,435	0/0:38,0:25:44.18:0,44,489	0/0:20,0:20:44.96:0,45,463	0/0:15,0:15:26.88:0,27,233	0/0:25,0:25:46.92:0,47,400	1/1:26,0:24:12.09:364,12,0	0/0:20,0:19:44.59:0,45,405	0/0:22,0:21:54.98:0,55,519	0/0:15,0:15:30.20:0,30,395	0/0:18,0:17:24.25:0,24,263	0/0:22,0:22:53.51:0,54,475	0/0:26,0:26:55.27:0,55,575	0/0:35,0:35:74.14:0,74,659	0/0:23,0:23:56.89:0,57,580	0/0:30,0:29:68.83:0,69,581	0/0:22,0:22:59.68:0,60,660	0/0:21,0:20:50.76:0,51,442	0/0:14,0:14:6.85:0,7,237	0/0:67,0:64:99:0,106,1027	0/0:21,0:21:51.84:0,52,513	0/0:15,0:15:27.47:0,27,318	0/0:38,0:38:83.69:0,84,888	0/0:22,0:22:54.40:0,54,517	0/1:12,19:33:84.84:341,0,85	0/1:6,0:24:16.38:72,0,16	1/1:10,0:10:3.52:112,4,0
chr10	2410689	.	CAAA	C	383.08	PASS	AB=0.625;AC=3;AF=0.054;AN=56;BaseQRankSum=-1.205;DP=509;FS=0.000;HRun=15;HaplotypeScore=113.4397;InbreedingCoeff=0.5338;MQ=62.12;MQ0=8;MQRankSum=0.629;QD=15.96;ReadPosRankSum=2.992;VQSLOD=2.5830;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,17:19:42.08:470,42,0	0/0:3,0:3:6.02:0,6,101	0/0:49,0:17:10.86:0,11,129	0/0:56,0:25:11.43:0,11,209	0/0:28,0:32:74.60:0,75,1108	0/0:16,0:18:51.13:0,51,767	0/1:2,1:5:18.63:19,0,127	0/0:14,0:14:17.74:0,18,193	0/0:10,0:11:30.06:0,30,429	0/0:17,0:18:42.08:0,42,569	0/0:19,0:21:41.16:0,41,553	0/0:10,0:10:27.06:0,27,397	0/0:13,0:13:33.09:0,33,533	0/0:9,0:10:30.08:0,30,458	0/0:6,0:7:15.10:0,15,219	0/0:8,0:10:21.05:0,21,321	0/0:22,0:22:49.02:0,49,763	0/0:8,0:11:31.27:0,31,442	0/0:17,0:18:9.11:0,9,318	0/0:20,0:25:58.22:0,58,810	0/0:12,0:13:27.04:0,27,414	0/0:10,0:11:24.01:0,24,347	0/0:15,0:16:39.10:0,39,598	0/0:15,0:15:31.50:0,32,443	0/0:16,0:17:42.08:0,42,614	0/0:34,0:34:62.66:0,63,616	0/0:19,0:17:41.68:0,42,398	0/0:8,0:8:13.28:0,13,119
chr10	2410698	.	A	AG	240.66	PASS	AB=0.914;AC=3;AF=0.054;AN=56;BaseQRankSum=1.530;DP=526;FS=9.136;HRun=0;HaplotypeScore=98.6507;InbreedingCoeff=-0.0660;MQ=59.61;MQ0=11;MQRankSum=-2.594;QD=3.25;ReadPosRankSum=-0.268;VQSLOD=2.2992;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:47.32:0,47,308	0/0:3,0:3:9.01:0,9,94	0/0:42,0:13:25.71:0,26,190	0/0:57,0:24:20.66:0,21,203	0/0:32,0:31:79.67:0,80,982	0/0:19,0:19:51.40:0,51,588	0/0:7,0:7:20.93:0,21,196	0/1:15,8:23:99:138,0,176	0/0:12,0:12:30.38:0,30,281	0/0:22,0:22:66.06:0,66,694	0/0:21,0:21:51.06:0,51,526	0/0:12,0:12:31.22:0,31,314	0/0:16,0:16:45.06:0,45,508	0/0:11,0:11:28.77:0,29,334	0/0:7,0:7:20.94:0,21,209	0/0:8,0:8:14.74:0,15,209	0/0:22,0:22:54.79:0,55,591	0/0:15,0:14:31.32:0,31,359	0/0:17,0:16:47.48:0,47,454	0/0:24,0:23:59.95:0,60,687	0/0:11,0:11:26.68:0,27,341	0/0:10,0:10:23.66:0,24,313	0/0:17,0:17:51.08:0,51,589	0/0:17,0:17:33.52:0,34,369	0/0:21,0:20:50.16:0,50,570	0/1:30,0:30:82.19:82,0,453	0/1:21,0:19:99:120,0,128	0/0:10,0:9:3.98:0,4,146
chr10	2417299	.	T	TA	286.82	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.015;DP=514;FS=0.845;HRun=0;HaplotypeScore=64.5453;InbreedingCoeff=0.9720;MQ=71.05;MQ0=8;MQRankSum=0.321;QD=13.66;ReadPosRankSum=-0.212;VQSLOD=4.1874;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,12:21:13.71:374,14,0	0/0:13,0:13:39.11:0,39,513	0/0:32,0:19:33:0,33,433	0/0:15,0:11:23.78:0,24,229	0/0:24,0:24:72.23:0,72,985	0/0:22,0:22:66.22:0,66,917	0/0:16,0:16:48.16:0,48,670	0/0:23,0:23:46.67:0,47,241	0/0:18,0:18:51.17:0,51,711	0/0:24,0:24:72.22:0,72,970	0/0:18,0:18:54.18:0,54,754	0/0:12,0:12:36.12:0,36,500	0/0:16,0:16:42.14:0,42,584	0/0:11,0:11:33.11:0,33,455	0/0:16,0:16:48.16:0,48,671	0/0:8,0:8:24.08:0,24,332	0/0:27,0:27:78.24:0,78,1048	0/0:12,0:12:36.11:0,36,486	0/0:16,0:15:45.14:0,45,610	0/0:24,0:24:72.22:0,72,970	0/0:12,0:12:36.11:0,36,484	0/0:16,0:16:45.15:0,45,626	0/0:14,0:14:39.13:0,39,542	0/0:11,0:11:33.11:0,33,460	0/0:14,0:14:42.12:0,42,566	0/0:29,0:29:45.18:0,45,405	0/0:33,0:33:37.83:0,38,394	0/0:17,0:17:28.54:0,29,225
chr10	2417493	.	AT	A	2632.92	PASS	AB=0.889;AC=11;AF=0.196;AN=56;BaseQRankSum=10.854;DP=532;FS=11.171;HRun=9;HaplotypeScore=50.8168;InbreedingCoeff=0.8747;MQ=71.07;MQ0=0;MQRankSum=-0.019;QD=18.67;ReadPosRankSum=-0.279;VQSLOD=2.7978;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:63.13:0,63,959	0/0:10,0:10:21.06:0,21,242	0/0:14,0:14:29.44:0,29,305	0/0:7,0:6:8.94:0,9,83	0/0:19,0:19:57.17:0,57,658	0/0:23,0:23:66.20:0,66,761	0/0:17,0:17:45.13:0,45,519	1/1:3,32:35:95.91:848,96,0	0/0:20,0:20:54.14:0,54,606	0/0:25,0:25:66.18:0,66,751	0/0:14,0:14:39.12:0,39,450	0/0:16,0:17:44.97:0,45,499	0/0:21,0:21:63.18:0,63,717	0/0:18,0:18:45.13:0,45,519	0/0:14,0:13:42.12:0,42,485	0/0:19,0:19:57.15:0,57,642	1/1:8,20:28:57.02:522,57,0	0/0:9,0:9:24.07:0,24,277	0/0:24,0:24:57.16:0,57,649	0/0:25,0:25:63.16:0,63,702	0/0:13,0:13:33.09:0,33,372	0/1:14,2:16:12.94:13,0,354	0/0:18,0:19:50.97:0,51,560	0/0:10,0:10:30.09:0,30,346	0/0:18,1:19:29.69:0,30,588	1/1:4,23:27:69.03:632,69,0	1/1:1,29:30:72.04:659,72,0	1/1:0,5:5:15.01:137,15,0
chr10	2418262	.	AAC	A	287.68	PASS	AB=0.950;AC=15;AF=0.357;AN=42;BaseQRankSum=2.604;DP=442;FS=1.038;HRun=0;HaplotypeScore=74.7204;InbreedingCoeff=-0.1480;MQ=58.66;MQ0=15;MQRankSum=0.192;QD=1.48;ReadPosRankSum=1.344;VQSLOD=1.4901;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:6.02:0,6,81	./.	./.	./.	0/1:10,0:8:25.78:26,0,35	0/1:13,1:14:33.49:33,0,48	0/1:27,2:27:30.39:30,0,110	0/0:19,0:18:0.89:0,1,2	0/0:15,0:16:6.01:0,6,70	0/0:9,0:9:3:0,3,28	./.	0/1:7,1:8:22.87:23,0,47	./.	0/1:10,0:10:5.08:5,0,59	0/0:15,0:14:3.01:0,3,33	0/1:9,2:11:25.80:26,0,38	0/0:23,0:29:12.02:0,12,139	0/1:13,0:13:13.91:14,0,169	1/1:12,1:8:3.01:32,3,0	1/1:10,2:12:6.45:52,6,0	0/1:29,0:26:11.24:11,0,113	0/0:16,0:16:9.03:0,9,126	0/0:12,0:12:12.02:0,12,170	0/1:35,2:36:99:149,0,103	./.	./.	1/1:8,0:9:2.84:14,3,0	0/0:4,0:4:3.48:0,3,31
chr10	2420322	.	TCTTTTTTTTTTTTTTATTAA	T	173.72	PASS	AB=1.000;AC=9;AF=0.167;AN=54;BaseQRankSum=1.795;DP=277;FS=7.497;HRun=0;HaplotypeScore=133.9690;InbreedingCoeff=0.6841;MQ=75.26;MQ0=11;MQRankSum=1.055;QD=2.71;ReadPosRankSum=-3.574;VQSLOD=1.0407;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:14,0:13:0:0,0,0	0/0:6,0:5:12.04:0,12,716	0/0:12,0:8:15.05:0,15,338	0/0:12,0:9:11.11:0,11,514	0/0:8,0:8:24.08:0,24,1917	0/0:10,0:10:30.10:0,30,2485	0/0:9,0:8:24.05:0,24,1412	1/1:8,4:11:11.98:152,12,0	0/0:4,0:4:12.04:0,12,898	0/0:9,0:9:24.03:0,24,1432	0/0:10,0:9:27.09:0,27,2081	0/0:2,0:2:3.01:0,3,242	0/0:4,0:4:6.02:0,6,305	0/0:5,0:5:15.05:0,15,1353	0/0:9,0:10:27.09:0,27,2314	0/0:10,0:10:27.09:0,27,1490	1/1:10,0:9:2.88:49,3,0	0/0:8,0:8:18.06:0,18,1734	0/0:11,0:11:24.08:0,24,1650	0/0:14,0:14:39.13:0,39,2911	0/0:13,0:13:39.13:0,39,2432	0/0:5,0:4:9.03:0,9,503	0/0:14,0:14:42.13:0,42,2365	0/0:19,0:18:48.13:0,48,3742	0/0:16,0:15:42.14:0,42,3651	1/1:12,0:10:2.96:49,3,0	1/1:16,0:16:2.95:50,3,0	./.
chr10	2428930	.	G	GCT	7186.22	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-1.533;DP=593;FS=1.600;HRun=0;HaplotypeScore=77.7620;InbreedingCoeff=0.9955;MQ=89.72;MQ0=1;MQRankSum=-4.378;QD=47.28;ReadPosRankSum=1.510;VQSLOD=6.0511;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,22:23:63.22:1117,63,0	0/0:9,0:9:21.07:0,21,289	0/0:29,0:28:69.01:0,69,866	0/0:24,0:24:25.37:0,25,744	0/0:23,0:23:69.20:0,69,914	0/0:32,0:32:90.29:0,90,1219	0/0:18,0:18:51.16:0,51,684	1/1:6,31:37:90.31:1598,90,0	0/0:15,0:15:36.08:0,36,460	0/0:30,0:30:81.27:0,81,1108	0/0:17,0:17:51.17:0,51,701	0/0:14,0:14:42.14:0,42,577	0/0:21,0:21:51.15:0,51,683	0/0:23,0:23:69.23:0,69,946	0/0:22,0:22:66.19:0,66,886	0/0:24,0:24:69.23:0,69,944	1/1:2,16:17:38.71:691,39,0	0/0:7,0:7:15.05:0,15,206	0/0:26,0:26:72.24:0,72,990	0/0:20,0:20:60.20:0,60,824	0/0:20,0:20:57.19:0,57,783	0/0:20,0:20:48.16:0,48,657	0/0:20,0:20:60.20:0,60,824	0/0:17,0:17:45.12:0,45,599	0/0:10,0:10:30.10:0,30,412	1/1:1,27:28:81.28:1438,81,0	1/1:0,35:34:99:1757,99,0	1/1:1,10:11:33.11:585,33,0
chr10	2429355	.	CCA	C	104.05	PASS	AB=0.600;AC=33;AF=0.750;AN=44;BaseQRankSum=2.112;DP=86;FS=24.640;HRun=0;HaplotypeScore=140.2621;InbreedingCoeff=0.2983;MQ=77.59;MQ0=0;MQRankSum=-2.991;QD=1.33;ReadPosRankSum=3.966;VQSLOD=0.9133;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	1/1:0,1:1:1.55:4,2,0	0/1:5,0:4:18.61:19,0,52	0/0:4,0:4:11.37:0,11,151	0/0:1,0:1:2.37:0,2,8	1/1:0,4:4:0.19:10,0,0	1/1:0,8:8:6.99:19,7,0	./.	1/1:1,5:6:8.09:20,8,0	1/1:0,2:2:0.44:1,0,0	./.	0/1:0,3:3:0.19:0,0,1	1/1:0,8:8:3.43:12,3,0	1/1:0,6:6:5.88:15,6,0	1/1:0,7:7:10.16:27,10,0	0/1:0,11:11:2.48:19,0,2	0/1:0,2:2:0:0,0,0	./.	1/1:0,2:2:5.24:20,5,0	0/1:0,2:2:0.08:0,0,0	1/1:0,2:2:2.49:5,2,0	1/1:0,2:2:2.80:6,3,0	0/0:1,2:3:3.69:0,4,9	1/1:0,4:4:4.14:21,4,0	1/1:0,1:1:1.25:3,1,0	./.	1/1:0,2:2:2.97:11,3,0	./.
chr10	2429399	.	GTGA	G	38.42	PASS	AB=0.574;AC=21;AF=0.525;AN=40;BaseQRankSum=3.867;DP=52;FS=18.572;HRun=0;HaplotypeScore=79.9244;InbreedingCoeff=0.3733;MQ=46.85;MQ0=0;MQRankSum=-1.872;QD=1.13;ReadPosRankSum=3.517;VQSLOD=0.2080;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:3,1:4:8.05:0,8,77	./.	./.	0/0:2,0:1:2.94:0,3,18	0/1:1,1:2:0:0,0,0	0/1:1,4:5:7.03:7,0,14	1/1:0,1:1:2.60:10,3,0	./.	1/1:3,2:5:8.75:49,9,0	0/0:2,0:2:4.26:0,4,47	./.	0/0:0,1:1:0.47:0,0,1	1/1:0,1:1:1.25:3,1,0	1/1:0,3:3:4.95:23,5,0	1/1:1,6:7:4.11:15,4,0	1/1:0,4:4:6.67:22,7,0	0/1:0,2:2:0:0,0,0	./.	1/1:1,0:1:2.60:10,3,0	./.	0/0:3,0:3:5.93:0,6,62	./.	0/0:0,1:1:0:0,0,0	./.	0/0:0,2:2:2.51:0,3,7	0/0:0,1:1:2.22:0,2,7	1/1:0,2:2:1.06:4,1,0	1/1:0,1:1:2.22:7,2,0
chr10	2429404	.	G	GA	389.94	PASS	AB=0.965;AC=22;AF=0.393;AN=56;BaseQRankSum=6.749;DP=206;FS=112.889;HRun=2;HaplotypeScore=192.7379;InbreedingCoeff=-0.1905;MQ=46.58;MQ0=0;MQRankSum=-3.534;QD=2.48;ReadPosRankSum=0.828;VQSLOD=0.1306;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:9.60:0,10,226	0/1:7,0:7:8.44:8,0,103	0/0:6,0:4:0:0,0,0	0/0:4,0:3:3:0,3,28	0/1:11,1:12:2.67:3,0,46	0/1:13,0:13:47.44:47,0,108	0/1:3,0:3:5.26:5,0,75	0/0:5,0:5:5.98:0,6,49	0/1:8,2:10:65.05:111,0,65	0/1:12,1:13:14.61:15,0,107	0/1:10,0:10:1.10:1,0,33	1/1:4,0:4:6.12:32,6,0	0/1:5,0:5:7.31:7,0,113	1/1:8,0:8:2.06:44,2,0	0/1:11,1:12:0.98:91,0,1	0/1:8,0:8:45.49:67,0,45	0/0:3,0:3:2.98:0,3,22	0/0:2,0:2:1.25:0,1,3	0/1:4,1:4:1.65:2,0,99	0/1:10,0:8:1.02:1,0,53	0/0:7,0:7:17.88:0,18,178	0/1:14,0:14:4.55:5,0,40	0/1:7,0:7:3.64:4,0,91	0/0:3,0:3:3.01:0,3,35	0/1:10,0:10:40.07:40,0,61	0/0:4,0:4:5.04:0,5,34	0/1:4,0:4:31.81:32,0,50	1/1:2,0:2:3.48:12,3,0
chr10	2429409	.	G	GA	455.36	PASS	AB=0.688;AC=14;AF=0.250;AN=56;BaseQRankSum=9.173;DP=281;FS=104.797;HRun=0;HaplotypeScore=128.0269;InbreedingCoeff=-0.2344;MQ=44.39;MQ0=0;MQRankSum=-4.066;QD=3.48;ReadPosRankSum=6.260;VQSLOD=-0.6474;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:16,6:22:21.09:0,21,343	0/0:8,1:9:16.41:0,16,169	0/0:7,0:4:11.93:0,12,121	0/0:5,0:3:6:0,6,59	0/0:12,2:14:5.64:0,6,83	0/1:9,4:13:18.58:19,0,147	0/1:4,2:6:4.02:4,0,111	0/0:7,0:7:9.02:0,9,110	0/1:9,2:11:28.62:29,0,144	0/1:15,4:19:72.96:73,0,241	0/0:10,2:12:10.05:0,10,77	1/1:4,1:5:2.86:15,3,0	0/0:6,2:8:12.57:0,13,180	0/1:5,4:9:22.26:22,0,48	0/1:7,7:14:23.67:69,0,24	0/1:4,7:11:55.60:56,0,77	0/1:1,4:5:32.74:56,0,33	0/0:1,1:2:2.60:0,3,10	0/0:5,0:4:10.28:0,10,129	0/0:11,3:12:19.28:0,19,125	0/0:7,0:7:17.98:0,18,229	0/0:16,7:23:2.44:0,2,187	0/0:8,4:12:12.48:0,12,174	0/0:2,1:3:3.01:0,3,42	0/1:10,5:15:13.79:14,0,111	0/1:4,6:10:41.91:139,0,42	0/1:3,6:9:55.42:89,0,55	0/1:1,3:4:9.09:19,0,9
chr10	2429413	.	G	GA	657.99	PASS	AB=0.724;AC=16;AF=0.286;AN=56;BaseQRankSum=10.033;DP=306;FS=136.176;HRun=0;HaplotypeScore=128.7485;InbreedingCoeff=-0.4336;MQ=47.59;MQ0=0;MQRankSum=-5.129;QD=3.54;ReadPosRankSum=5.913;VQSLOD=-0.4342;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,6:22:7.69:0,8,381	0/1:8,1:9:8.05:8,0,195	0/0:11,0:6:11.99:0,12,142	0/0:7,0:5:5.99:0,6,64	0/0:13,2:15:8.65:0,9,125	0/1:9,4:13:28.90:29,0,281	0/1:3,3:6:39.13:39,0,108	0/0:8,0:8:15.03:0,15,190	0/1:10,2:12:41.84:42,0,169	0/1:15,4:20:72.61:73,0,397	0/0:10,2:12:10.27:0,10,112	0/1:5,1:6:10.54:11,0,58	0/0:6,2:8:1.07:0,1,200	0/1:6,4:10:37.04:37,0,63	0/1:7,7:15:98.93:103,0,99	0/1:5,7:12:73.71:74,0,92	0/1:1,4:5:32.84:56,0,33	0/0:1,1:2:2.60:0,3,10	0/0:6,0:5:13.29:0,13,170	0/0:12,3:13:21.94:0,22,201	0/0:10,0:10:21.02:0,21,270	0/1:17,7:24:19.46:19,0,288	0/1:9,4:13:2.66:3,0,260	0/0:3,1:4:5.98:0,6,62	0/1:10,5:15:38.43:38,0,206	0/1:6,6:12:97.15:139,0,97	0/1:4,6:10:99:116,0,125	0/1:1,3:4:20.96:21,0,30
chr10	2430090	.	C	CA	7992.13	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=19.111;DP=757;FS=4.060;HRun=1;HaplotypeScore=93.6217;InbreedingCoeff=0.9967;MQ=78.72;MQ0=0;MQRankSum=-0.728;QD=40.99;ReadPosRankSum=1.678;VQSLOD=5.2502;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,56:57:99:2227,154,0	0/0:11,0:11:33.11:0,33,428	0/0:17,0:17:45.12:0,45,544	0/0:16,0:16:45.14:0,45,551	0/0:34,0:34:99:0,102,1308	0/0:23,0:23:66.20:0,66,842	0/0:27,0:27:81.22:0,81,1009	1/1:1,28:29:87.28:1236,87,0	0/0:27,0:27:78.25:0,78,1012	0/0:24,0:24:72.23:0,72,935	0/0:15,0:15:42.14:0,42,544	0/0:24,0:24:72.23:0,72,935	0/0:29,0:29:84.27:0,84,1090	0/0:32,0:32:90.26:0,90,1139	0/0:33,0:33:99:0,99,1284	0/0:24,0:23:72.22:0,72,921	1/1:0,23:23:66.22:960,66,0	0/0:19,0:19:57.19:0,57,740	0/0:18,0:18:51.17:0,51,662	0/0:28,0:28:81.19:0,81,1000	0/0:36,0:36:99:0,105,1335	0/0:32,0:32:90.29:0,90,1168	0/0:32,0:32:93.30:0,93,1206	0/0:32,0:32:90.29:0,90,1169	0/0:29,0:29:87.27:0,87,1114	1/1:1,36:37:99:1522,108,0	1/1:1,43:44:99:1829,126,0	1/1:0,5:5:15.05:219,15,0
chr10	2430692	.	T	TAA	2705.37	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=-7.902;DP=629;FS=0.000;HRun=11;HaplotypeScore=78.4421;InbreedingCoeff=0.9326;MQ=72.99;MQ0=0;MQRankSum=0.411;QD=21.64;ReadPosRankSum=-0.382;VQSLOD=2.9757;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:90.04:0,90,873	0/0:13,0:15:41.55:0,42,373	0/1:17,0:16:0.79:1,0,174	0/0:15,0:15:21.89:0,22,146	0/0:32,0:33:74.72:0,75,704	0/0:19,0:19:41.99:0,42,407	0/0:17,0:19:47.53:0,48,431	1/1:11,12:23:36.07:462,36,0	0/0:28,0:29:80.78:0,81,746	0/0:22,0:22:57.05:0,57,546	0/0:18,0:18:45.01:0,45,436	0/0:22,0:23:68.85:0,69,652	0/0:22,0:23:48:0,48,515	0/0:24,0:27:56.50:0,57,518	0/0:23,0:25:56.55:0,57,564	0/0:19,0:20:50.77:0,51,470	1/1:3,22:26:31.09:782,31,0	0/0:24,0:24:57.05:0,57,553	0/0:20,0:19:42:0,42,402	0/0:30,0:30:65.82:0,66,619	0/0:15,0:15:41.40:0,41,386	0/0:24,0:26:53.59:0,54,544	0/0:20,0:20:54.06:0,54,518	0/0:20,0:20:54.03:0,54,511	0/0:22,0:22:47.99:0,48,466	1/1:5,19:25:28.02:708,28,0	1/1:4,20:23:22.09:666,22,0	1/1:2,6:8:18.06:261,18,0
chr10	2431867	.	A	AT	911.68	PASS	AB=1.000;AC=4;AF=0.071;AN=56;BaseQRankSum=-6.109;DP=432;FS=2.486;HRun=9;HaplotypeScore=55.3777;InbreedingCoeff=0.4927;MQ=70.63;MQ0=0;MQRankSum=0.129;QD=18.23;ReadPosRankSum=0.458;VQSLOD=3.7814;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,34:36:90.24:996,90,0	0/1:5,0:5:21.08:21,0,61	0/0:7,0:7:19.25:0,19,142	0/1:7,0:9:2.31:2,0,87	0/0:17,0:17:32.97:0,33,286	0/0:18,0:18:47.97:0,48,412	0/0:12,0:12:32.97:0,33,282	0/0:24,0:26:32.95:0,33,99	0/0:14,0:14:38.99:0,39,339	0/0:15,0:15:41.98:0,42,362	0/0:14,0:14:38.88:0,39,325	0/0:16,0:16:35.98:0,36,312	0/0:10,0:10:29.99:0,30,260	0/0:12,0:12:10.10:0,10,192	0/0:6,0:6:18:0,18,156	0/0:13,0:13:35.98:0,36,310	0/0:26,0:26:59.96:0,60,518	0/0:22,0:22:62.98:0,63,547	0/0:14,0:14:29.97:0,30,257	0/0:24,0:24:59.96:0,60,521	0/0:13,0:13:14.98:0,15,130	0/0:18,0:18:44.96:0,45,385	0/0:10,0:10:29.99:0,30,260	0/0:14,0:14:32.99:0,33,286	0/0:15,0:15:41.97:0,42,363	0/0:15,0:17:40:0,40,140	0/0:18,0:19:26.04:0,26,81	0/0:7,0:10:17.63:0,18,55
chr10	2431875	.	T	TAA	2697.54	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=8.100;DP=428;FS=2.483;HRun=0;HaplotypeScore=59.2086;InbreedingCoeff=0.9392;MQ=70.84;MQ0=0;MQRankSum=-3.618;QD=37.99;ReadPosRankSum=-1.109;VQSLOD=4.5875;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:96.20:0,96,1010	0/0:5,0:5:15.04:0,15,205	0/0:8,0:8:20.98:0,21,271	0/0:8,0:8:2.43:0,2,193	0/0:23,0:23:60.17:0,60,867	0/0:20,0:20:60.19:0,60,923	0/0:11,0:11:33.11:0,33,538	1/1:6,20:27:75.21:1191,75,0	0/0:16,0:16:45.15:0,45,725	0/0:16,0:16:48.14:0,48,737	0/0:14,0:14:42.14:0,42,665	0/0:14,0:14:42.13:0,42,656	0/0:10,0:10:30.10:0,30,489	0/0:10,0:10:30.10:0,30,468	0/0:8,0:8:24.08:0,24,383	0/0:12,0:12:36.12:0,36,572	0/0:24,0:24:72.23:0,72,1119	0/0:23,0:23:69.24:0,69,1113	0/0:14,0:14:42.13:0,42,626	0/0:23,0:23:69.21:0,69,1073	0/0:7,0:7:18.06:0,18,287	0/0:17,0:17:51.16:0,51,783	0/0:11,0:11:33.11:0,33,533	0/0:12,0:12:36.12:0,36,582	0/0:15,0:15:45.14:0,45,683	1/1:3,16:19:52.04:786,52,0	1/1:1,13:15:37.35:603,37,0	1/1:3,7:10:20.17:277,20,0
chr10	2432113	.	AG	A	327.93	PASS	AB=0.571;AC=5;AF=0.093;AN=54;BaseQRankSum=3.921;DP=417;FS=29.499;HRun=2;HaplotypeScore=54.4465;InbreedingCoeff=0.6689;MQ=65.68;MQ0=3;MQRankSum=-2.658;QD=21.86;ReadPosRankSum=-0.883;VQSLOD=1.7669;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:57.11:0,57,804	0/0:6,0:6:14.69:0,15,224	0/0:31,0:22:66.22:0,66,989	0/0:21,0:18:48.16:0,48,712	0/0:18,0:18:51.09:0,51,712	0/0:20,0:20:60.20:0,60,896	0/0:12,0:12:33.09:0,33,474	1/1:1,5:6:15.05:195,15,0	0/0:13,0:13:36.11:0,36,519	0/0:16,0:16:42.14:0,42,614	0/0:12,0:12:36.12:0,36,534	0/0:12,0:12:35.98:0,36,485	0/0:16,0:16:48.16:0,48,719	0/0:18,0:18:54.14:0,54,743	0/0:11,0:11:33.11:0,33,495	0/0:15,0:15:45.14:0,45,653	0/0:16,0:16:29.98:0,30,364	0/0:19,0:19:57.11:0,57,805	0/0:17,0:17:51.08:0,51,696	0/0:14,0:14:42.14:0,42,629	0/0:21,0:21:63.21:0,63,941	0/0:16,0:16:48.16:0,48,718	0/0:9,0:9:24.06:0,24,337	0/0:28,0:28:78.16:0,78,1095	0/0:14,0:14:18.17:0,18,474	0/1:2,6:8:47.83:209,0,48	1/1:0,1:1:3.01:39,3,0	./.
chr10	2437128	.	A	AG	1111.67	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-2.703;DP=625;FS=0.652;HRun=6;HaplotypeScore=98.2874;InbreedingCoeff=0.9003;MQ=80.03;MQ0=2;MQRankSum=-1.393;QD=25.85;ReadPosRankSum=2.553;VQSLOD=3.5853;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,41:42:96.31:1206,96,0	0/0:9,0:9:27.03:0,27,266	0/0:27,0:27:30.75:0,31,493	0/0:23,0:20:23.37:0,23,362	0/0:19,0:18:45.10:0,45,458	0/0:20,0:19:51.11:0,51,520	0/0:24,0:24:57.09:0,57,571	0/0:20,0:20:33.02:0,33,317	0/0:25,0:25:66.14:0,66,673	0/0:15,0:15:36.08:0,36,367	0/0:14,0:14:36.04:0,36,356	0/0:28,0:28:69.15:0,69,704	0/0:21,0:21:51.11:0,51,520	0/0:24,0:24:57.10:0,57,573	0/0:14,0:14:30.06:0,30,305	0/0:19,0:19:54.12:0,54,550	0/0:30,0:30:72.16:0,72,733	0/0:32,0:31:69.10:0,69,692	0/0:15,0:15:42.10:0,42,429	0/0:10,0:10:30.07:0,30,306	0/0:47,0:47:99:0,120,1224	0/0:19,0:18:45.56:0,46,454	0/0:16,0:16:30.06:0,30,306	0/0:35,0:35:87.19:0,87,887	0/0:21,0:21:51.11:0,51,520	0/0:24,0:24:51.10:0,51,520	0/0:29,0:29:72.16:0,72,733	0/0:2,0:2:6.01:0,6,61
chr10	2437912	.	A	AG	1047.76	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-5.988;DP=594;FS=4.183;HRun=7;HaplotypeScore=62.0292;InbreedingCoeff=0.8727;MQ=77.48;MQ0=0;MQRankSum=0.672;QD=28.32;ReadPosRankSum=0.331;VQSLOD=4.3847;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,32:37:96.28:1143,96,0	0/0:9,0:9:24.04:0,24,231	0/0:17,1:18:5.68:0,6,316	0/0:18,0:17:15.78:0,16,251	0/0:19,0:19:57.09:0,57,549	0/0:18,0:18:51.08:0,51,492	0/0:29,0:29:69.09:0,69,666	0/0:29,0:29:63.08:0,63,604	0/0:19,0:19:51.03:0,51,478	0/0:15,0:15:35.86:0,36,327	0/0:21,0:21:51.08:0,51,492	0/0:22,0:22:60.08:0,60,574	0/0:15,0:15:42.02:0,42,397	0/0:34,0:34:93.14:0,93,898	0/0:24,0:24:63.10:0,63,608	0/0:21,0:21:60.09:0,60,579	0/0:35,0:35:99:0,102,985	0/0:37,0:37:99:0,105,1009	0/0:20,1:21:18.35:0,18,448	0/0:13,0:13:39.05:0,39,370	0/0:37,0:37:93.13:0,93,893	0/0:7,0:7:17.97:0,18,162	0/0:18,0:18:45.07:0,45,434	0/0:25,0:25:63.08:0,63,604	0/0:15,0:15:42.06:0,42,406	0/0:13,0:13:30.03:0,30,286	0/0:17,0:17:48.06:0,48,457	0/0:8,0:8:24.02:0,24,226
chr10	2438058	.	A	AT	3027.48	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=6.700;DP=656;FS=5.699;HRun=1;HaplotypeScore=72.9668;InbreedingCoeff=0.9247;MQ=70.97;MQ0=0;MQRankSum=-4.866;QD=37.84;ReadPosRankSum=-1.580;VQSLOD=3.4840;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,105,1331	0/0:11,0:11:33.11:0,33,428	0/0:27,0:27:78.21:0,78,948	0/0:27,0:27:81.20:0,81,999	0/0:31,0:31:93.20:0,93,1155	0/0:24,0:24:72.22:0,72,920	0/0:34,0:34:99:0,99,1253	1/1:0,29:28:84.28:1258,84,0	0/0:20,0:20:60.18:0,60,764	0/0:30,0:30:90.29:0,90,1169	0/0:16,0:16:48.14:0,48,609	0/0:20,0:20:60.18:0,60,765	0/0:15,0:15:34.71:0,35,499	0/0:24,0:24:69.21:0,69,880	0/0:24,0:24:69.22:0,69,896	0/0:18,0:18:54.18:0,54,701	0/0:24,0:24:72.22:0,72,919	0/0:36,0:36:99:0,108,1346	0/0:18,0:18:54.18:0,54,700	0/0:19,0:19:57.16:0,57,713	0/0:29,0:29:84.25:0,84,1063	0/0:19,0:19:57.18:0,57,728	0/0:16,0:16:45.13:0,45,569	0/0:31,0:31:90.28:0,90,1153	0/0:27,0:27:78.25:0,78,1012	1/1:2,24:26:0.26:935,0,0	1/1:1,9:10:24.08:358,24,0	1/1:0,15:14:42.14:626,42,0
chr10	2442651	.	TC	T	4042.82	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=11.580;DP=779;FS=0.000;HRun=3;HaplotypeScore=76.2969;InbreedingCoeff=0.9994;MQ=85.00;MQ0=0;MQRankSum=-2.198;QD=34.26;ReadPosRankSum=0.040;VQSLOD=3.9105;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,144,2050	0/0:11,0:11:30.10:0,30,432	0/0:29,0:29:84.24:0,84,1138	0/0:22,0:22:54.04:0,54,799	0/0:35,0:35:99:0,102,1466	0/0:28,0:28:84.22:0,84,1164	0/0:27,0:27:81.23:0,81,1143	1/1:2,34:36:96.29:1179,96,0	0/0:27,0:27:81.27:0,81,1166	0/0:27,0:27:75.25:0,75,1061	0/0:29,0:29:84.27:0,84,1191	0/0:29,0:29:87.29:0,87,1251	0/0:17,0:17:51.17:0,51,733	0/0:30,0:30:87.28:0,87,1233	0/0:31,0:31:93.30:0,93,1322	0/0:32,0:32:93.30:0,93,1322	0/0:29,0:29:87.21:0,87,1182	0/0:11,0:11:28.35:0,28,427	0/0:27,0:27:81.26:0,81,1148	0/0:35,0:35:99:0,99,1424	0/0:35,0:35:99:0,99,1426	0/0:23,0:23:66.21:0,66,932	0/0:23,0:23:66.22:0,66,946	0/0:29,0:29:84.28:0,84,1210	0/0:25,0:25:75.24:0,75,1062	1/1:0,30:30:90.28:1116,90,0	1/1:1,42:43:99:1413,114,0	1/1:0,9:9:27.08:335,27,0
chr10	2446488	.	CAAAAA	C	3766.10	PASS	AB=0.778;AC=8;AF=0.143;AN=56;BaseQRankSum=6.654;DP=585;FS=1.462;HRun=14;HaplotypeScore=116.2994;InbreedingCoeff=0.7393;MQ=68.88;MQ0=0;MQRankSum=-6.496;QD=33.04;ReadPosRankSum=2.970;VQSLOD=2.7942;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:30:75.24:0,75,1263	0/0:9,0:10:18.06:0,18,463	0/1:18,0:12:3.77:4,0,306	0/0:18,0:15:29.82:0,30,632	0/0:27,0:28:81.23:0,81,1898	0/0:14,0:14:39.13:0,39,1070	0/0:16,0:19:54.17:0,54,1309	1/1:6,30:36:90.23:1465,90,0	0/0:21,0:22:57.17:0,57,1431	0/0:22,0:24:45.14:0,45,1067	0/0:15,0:20:54.11:0,54,1229	0/0:22,0:24:63.13:0,63,1583	0/0:32,0:32:84.24:0,84,2015	0/0:5,0:18:36.08:0,36,502	0/0:17,0:25:54.64:0,55,1311	0/0:20,0:20:57.18:0,57,1521	0/0:7,0:31:81.25:0,81,1361	0/0:9,0:11:30.10:0,30,836	0/0:16,0:19:36.08:0,36,804	0/0:14,0:18:51.17:0,51,1276	0/0:18,0:19:45.14:0,45,1098	0/0:12,0:13:33.09:0,33,780	0/0:16,0:16:36.12:0,36,970	0/0:26,0:26:63.22:0,63,1707	0/0:14,0:14:27.09:0,27,746	0/1:5,19:25:21.97:906,0,22	1/1:3,26:29:66.20:1093,66,0	1/1:0,6:6:18.06:298,18,0
chr10	2446928	.	AAATTAGTT	A	1807.64	PASS	AB=0.533;AC=7;AF=0.130;AN=54;BaseQRankSum=6.097;DP=138;FS=42.016;HRun=0;HaplotypeScore=42.7145;InbreedingCoeff=0.4618;MQ=56.11;MQ0=2;MQRankSum=-6.097;QD=43.04;ReadPosRankSum=3.388;VQSLOD=1.6212;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:5:12.04:0,12,516	0/0:4,0:4:12.04:0,12,496	0/0:3,0:1:3.01:0,3,104	0/0:9,0:4:0.26:0,0,1	0/0:1,0:1:3.01:0,3,128	0/0:2,0:2:6.02:0,6,241	0/0:1,0:1:3.01:0,3,120	1/1:9,13:22:42.14:1066,42,0	./.	0/0:5,0:5:15.05:0,15,645	0/0:4,0:4:12.04:0,12,480	0/0:5,0:5:15.05:0,15,615	0/0:1,0:1:3.01:0,3,129	0/0:6,0:6:18.06:0,18,755	0/0:6,0:6:18.06:0,18,739	0/0:3,0:2:9.03:0,9,386	0/0:16,0:16:48.16:0,48,2061	0/0:10,0:8:24.08:0,24,1014	0/0:1,0:1:3.01:0,3,129	0/0:2,0:2:6.02:0,6,258	0/0:4,0:4:12.04:0,12,516	0/0:1,0:1:3.01:0,3,119	0/0:2,0:2:6.02:0,6,257	0/0:2,0:2:6.02:0,6,258	0/0:3,0:3:9.03:0,9,386	1/1:1,4:5:12.04:324,12,0	1/1:2,5:7:15.05:323,15,0	0/1:1,7:8:31.98:231,0,32
chr10	2447535	.	CT	C	1132.91	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=3.519;DP=575;FS=3.357;HRun=7;HaplotypeScore=82.7279;InbreedingCoeff=0.8894;MQ=80.26;MQ0=14;MQRankSum=1.631;QD=17.17;ReadPosRankSum=1.728;VQSLOD=3.7101;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:68.07:0,68,452	0/0:10,0:10:17.94:0,18,179	0/0:65,0:35:64.06:0,64,568	0/0:59,0:28:32.54:0,33,276	0/0:21,0:22:40.59:0,41,421	0/0:16,0:16:37.72:0,38,420	0/0:16,0:16:38.93:0,39,445	1/1:6,10:16:32.98:300,33,0	0/0:13,0:13:24.92:0,25,254	0/0:13,0:13:28.60:0,29,285	0/0:10,1:11:2.51:0,3,175	0/0:24,0:24:70.37:0,70,766	0/0:17,0:17:42.06:0,42,445	0/0:11,1:12:1.97:0,2,259	0/0:24,0:24:60.13:0,60,691	0/0:20,0:20:57.05:0,57,641	0/0:24,0:24:18.35:0,18,155	0/0:27,0:27:73.49:0,73,818	0/0:20,0:20:36.88:0,37,379	0/0:16,0:16:32.42:0,32,318	0/0:12,0:12:33.06:0,33,358	0/0:16,0:16:37.30:0,37,381	0/0:16,0:16:35.97:0,36,358	0/0:16,0:16:41.30:0,41,432	0/0:15,0:15:40.06:0,40,357	1/1:5,17:22:53.89:463,54,0	1/1:3,17:20:39.03:385,39,0	1/1:1,7:8:15:143,15,0
chr10	2447541	.	TTG	T	340.18	PASS	AB=0.954;AC=5;AF=0.089;AN=56;BaseQRankSum=4.830;DP=592;FS=0.000;HRun=0;HaplotypeScore=99.4968;InbreedingCoeff=0.1536;MQ=81.32;MQ0=15;MQRankSum=3.308;QD=4.54;ReadPosRankSum=0.557;VQSLOD=2.4489;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:27:35.34:51,0,35	0/0:9,0:9:20.99:0,21,308	0/0:71,0:38:69.73:0,70,774	0/0:60,0:29:33.18:0,33,376	0/0:21,0:21:56.53:0,57,669	0/0:18,0:18:53.38:0,53,731	0/0:19,0:19:50.73:0,51,767	0/1:14,1:15:26.33:117,0,26	0/0:11,0:11:29.84:0,30,372	0/0:13,0:13:29.85:0,30,355	0/0:15,0:15:12.59:0,13,321	0/0:24,0:24:71.98:0,72,1124	0/0:17,0:17:26.83:0,27,628	0/0:14,0:14:41.11:0,41,555	0/0:22,0:22:66.16:0,66,1087	0/0:20,0:20:59.18:0,59,1005	0/0:24,0:24:59.97:0,60,370	0/0:28,0:28:83.73:0,84,1291	0/0:17,0:17:47.64:0,48,609	0/0:16,0:16:47.63:0,48,534	0/0:12,0:12:33.07:0,33,480	0/0:15,0:15:38.85:0,39,509	0/0:18,0:18:41.76:0,42,492	0/0:16,0:16:47.80:0,48,618	0/0:19,0:19:33.47:0,33,512	0/1:23,2:25:25.57:241,0,26	0/0:18,0:17:11.27:0,11,47	1/1:7,1:8:0.28:41,0,0
chr10	2449071	.	CT	C	2517.45	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=10.546;DP=605;FS=9.131;HRun=6;HaplotypeScore=59.3755;InbreedingCoeff=0.9983;MQ=84.51;MQ0=0;MQRankSum=-0.916;QD=25.69;ReadPosRankSum=-0.686;VQSLOD=3.0360;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:93.27:0,93,1193	0/0:10,0:10:30.10:0,30,394	0/0:17,0:17:36.29:0,36,434	0/0:22,0:22:33.09:0,33,529	0/0:25,0:25:72.22:0,72,931	0/0:23,0:23:63.17:0,63,787	0/0:22,0:22:60.18:0,60,773	1/1:1,24:25:72.16:760,72,0	0/0:18,0:18:54.16:0,54,695	0/0:13,0:13:36.10:0,36,449	0/0:17,0:17:42.14:0,42,553	0/0:16,0:16:48.16:0,48,632	0/0:21,0:21:60.18:0,60,774	0/0:17,0:17:45.13:0,45,575	0/0:28,0:28:84.25:0,84,1076	0/0:24,0:24:72.23:0,72,934	0/0:44,0:44:99:0,126,1641	0/0:17,0:17:51.12:0,51,651	0/0:24,0:24:63.17:0,63,776	0/0:17,0:17:51.16:0,51,654	0/0:25,0:25:69.22:0,69,907	0/0:9,0:9:27.09:0,27,355	0/0:30,0:30:87.27:0,87,1118	0/0:17,0:17:51.14:0,51,640	0/0:17,0:17:48.16:0,48,632	1/1:4,29:33:44.72:823,45,0	1/1:2,30:32:81.20:869,81,0	1/1:1,7:8:21.05:226,21,0
chr10	2450327	.	TCAGAGA	T	834.62	PASS	AC=8;AF=0.148;AN=54;BaseQRankSum=4.475;DP=744;FS=5.120;HRun=0;HaplotypeScore=127.2691;InbreedingCoeff=0.8192;MQ=52.23;MQ0=54;MQRankSum=1.614;QD=10.98;ReadPosRankSum=0.190;VQSLOD=2.4334;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:39:64.77:0,65,1681	0/0:5,0:5:9.03:0,9,257	0/0:88,0:11:11.03:0,11,177	0/0:98,0:15:14.88:0,15,273	0/0:10,0:10:17.83:0,18,325	0/0:15,0:15:18.06:0,18,488	0/0:42,0:41:66.22:0,66,1999	1/1:19,0:18:9.03:135,9,0	0/0:22,0:22:29.89:0,30,876	0/0:29,0:28:33.11:0,33,927	0/0:10,0:9:8.73:0,9,244	0/0:19,0:19:36.12:0,36,1083	0/0:22,0:21:42.13:0,42,1193	0/0:22,0:22:18.06:0,18,538	0/0:28,0:27:51.18:0,51,1572	0/0:25,0:23:39.13:0,39,1140	./.	0/0:19,0:19:33.05:0,33,816	0/0:15,0:15:21.07:0,21,638	0/0:8,0:8:6.02:0,6,190	0/0:53,0:52:77.85:0,78,2180	0/0:9,0:9:12.04:0,12,385	0/0:11,0:9:15.05:0,15,474	0/0:37,0:33:63.20:0,63,1798	0/0:14,0:14:18.06:0,18,512	1/1:14,12:24:30.10:595,30,0	1/1:12,11:23:9.11:183,9,0	1/1:7,1:8:3.01:61,3,0
chr10	2450704	.	C	CTGTGTG	1510.38	PASS	AB=1.000;AC=14;AF=0.280;AN=50;BaseQRankSum=0.992;DP=590;FS=0.760;HRun=0;HaplotypeScore=150.1336;InbreedingCoeff=0.5765;MQ=68.16;MQ0=18;MQRankSum=-4.673;QD=6.90;ReadPosRankSum=-4.530;VQSLOD=1.1191;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:44,0:37:12.25:215,12,0	0/0:8,0:8:12.01:0,12,167	./.	./.	0/0:11,0:12:9.92:0,10,157	0/0:21,0:21:15.05:0,15,272	0/1:16,0:14:3.86:4,0,246	1/1:27,0:26:16.61:261,17,0	0/0:16,0:18:12.04:0,12,204	0/1:16,0:16:0.93:1,0,37	0/0:13,0:15:6.01:0,6,102	0/0:20,0:20:23.95:0,24,453	0/0:12,0:14:12.51:0,13,223	0/0:14,0:16:29.99:0,30,485	0/0:21,0:23:33.07:0,33,571	0/0:18,0:18:18.06:0,18,340	0/0:13,0:20:26.91:0,27,320	0/1:19,0:20:21.06:21,0,326	./.	0/1:22,0:21:5.08:5,0,213	0/0:27,0:25:3:0,3,60	0/0:13,0:14:12.03:0,12,208	0/0:9,0:9:15.05:0,15,301	0/0:36,0:38:63.20:0,63,1175	0/0:20,0:21:20.96:0,21,356	1/1:30,0:30:30.49:594,30,0	1/1:16,7:25:11.18:299,11,0	1/1:7,4:17:9.50:273,10,0
chr10	2450733	.	T	TGTGTGT	931.54	PASS	AB=1.000;AC=16;AF=0.320;AN=50;BaseQRankSum=-2.795;DP=623;FS=0.000;HRun=0;HaplotypeScore=146.2722;InbreedingCoeff=0.5396;MQ=51.92;MQ0=24;MQRankSum=-4.391;QD=3.68;ReadPosRankSum=-5.394;VQSLOD=-0.0128;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:42,0:35:11.29:214,11,0	0/0:6,0:6:12.01:0,12,167	./.	./.	0/0:15,0:15:9.92:0,10,157	0/0:17,0:17:15.05:0,15,272	0/0:19,0:17:16.85:0,17,269	1/1:27,0:24:6.25:15,6,0	0/0:17,0:17:12.04:0,12,204	0/1:13,0:12:3.29:3,0,35	0/0:15,0:15:6.01:0,6,102	0/0:23,0:23:25.64:0,26,457	0/0:18,0:18:12.04:0,12,223	0/0:17,0:15:29.99:0,30,485	0/0:24,0:24:32.86:0,33,570	0/0:19,0:19:15.05:0,15,302	0/0:27,0:25:29.92:0,30,377	0/1:23,0:23:14.11:14,0,327	./.	0/1:28,0:27:4.60:5,0,213	1/1:32,0:28:0.42:1,0,0	0/0:14,0:14:12.03:0,12,208	0/0:12,0:12:15.05:0,15,301	0/0:51,0:50:63.20:0,63,1171	0/1:22,0:22:4.41:4,0,332	1/1:20,5:25:20.07:392,20,0	1/1:23,0:22:8.17:246,8,0	1/1:17,0:16:6.49:193,6,0
chr10	2450768	.	TG	T	585.11	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.024;DP=628;FS=4.147;HRun=5;HaplotypeScore=95.7526;InbreedingCoeff=0.9622;MQ=71.92;MQ0=1;MQRankSum=-3.994;QD=25.44;ReadPosRankSum=1.632;VQSLOD=2.8924;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:71.76:0,72,633	0/0:4,0:4:12.04:0,12,164	0/0:48,0:42:99:0,114,1489	0/0:33,0:30:80.28:0,80,1048	0/0:25,0:25:63.21:0,63,856	0/0:19,0:19:57.19:0,57,776	0/0:17,0:17:36.09:0,36,476	0/0:21,0:21:60.20:0,60,815	0/0:18,0:18:51.17:0,51,694	0/0:11,0:11:33.11:0,33,444	0/0:21,0:21:57.19:0,57,760	0/0:23,0:23:60.20:0,60,809	0/0:20,0:20:51.17:0,51,696	0/0:19,0:18:45.15:0,45,603	0/0:24,0:24:66.19:0,66,878	0/0:19,0:19:45.15:0,45,615	1/1:1,22:23:60.17:680,60,0	0/0:24,1:25:34.69:0,35,827	0/0:16,0:16:48.16:0,48,656	0/0:22,0:22:45.09:0,45,560	0/0:34,0:34:90.20:0,90,1208	0/0:16,0:16:45.15:0,45,599	0/0:18,0:18:54.18:0,54,731	0/0:38,0:38:96.26:0,96,1264	0/0:19,0:19:51.17:0,51,694	0/0:19,0:19:51.17:0,51,693	0/0:27,0:27:69.23:0,69,936	0/0:15,0:15:18.03:0,18,222
chr10	2450797	.	ATG	A	675.74	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.251;DP=741;FS=18.198;HRun=0;HaplotypeScore=107.2163;InbreedingCoeff=0.9628;MQ=59.46;MQ0=10;MQRankSum=-2.926;QD=21.12;ReadPosRankSum=2.250;VQSLOD=2.8060;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,27:30:58.66:771,59,0	0/0:6,0:6:12.04:0,12,204	0/0:55,1:28:51.13:0,51,811	0/0:47,0:28:45.86:0,46,721	0/0:31,0:31:90.27:0,90,1449	0/0:23,0:23:66.70:0,67,1117	0/0:24,0:23:63.22:0,63,1071	0/0:32,0:31:78.25:0,78,1238	0/0:23,0:23:60.21:0,60,1012	0/0:17,0:17:51.17:0,51,862	0/0:21,0:21:54.18:0,54,912	0/0:23,0:23:60.19:0,60,993	0/0:22,0:22:56.94:0,57,930	0/0:24,0:24:72.23:0,72,1181	0/0:20,0:20:56.09:0,56,918	0/0:19,0:19:51.17:0,51,863	0/0:21,0:21:41.61:0,42,763	0/0:28,0:28:80.98:0,81,1295	0/0:25,0:25:66.22:0,66,1076	0/0:25,0:25:66.22:0,66,1088	0/0:52,0:52:99:0,132,2163	0/0:20,0:20:53.85:0,54,874	0/0:24,0:24:72.23:0,72,1166	0/0:36,0:36:87.24:0,87,1379	0/0:21,0:21:48.06:0,48,744	0/0:26,0:26:75.26:0,75,1255	0/0:31,0:31:90.29:0,90,1493	0/0:12,0:12:18.06:0,18,300
chr10	2450853	.	TGTATGTGTTTGGGG	T	1470	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.381;DP=751;FS=3.606;HRun=0;HaplotypeScore=286.2923;InbreedingCoeff=0.9890;MQ=82.50;MQ0=0;MQRankSum=-5.242;QD=45.94;ReadPosRankSum=-0.336;VQSLOD=2.6874;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,7:18:17.83:804,18,0	0/0:6,0:6:18.06:0,18,1242	0/0:42,0:40:99:0,106,5803	0/0:55,0:54:99:0,102,5693	0/0:30,0:30:81.28:0,81,5204	0/0:33,0:33:84.29:0,84,5277	0/0:39,0:39:99:0,99,6036	0/0:22,0:22:60.21:0,60,3517	0/0:22,0:22:60.21:0,60,3827	0/0:25,0:25:69.24:0,69,4257	0/0:12,0:12:30.10:0,30,1524	0/0:26,0:26:72.25:0,72,4362	0/0:22,0:22:66.23:0,66,4479	0/0:26,0:26:69.24:0,69,4243	0/0:33,0:33:96.33:0,96,6050	0/0:24,0:24:66.22:0,66,4163	1/1:6,6:12:21.07:784,21,0	0/0:25,0:25:66.20:0,66,3633	0/0:17,0:17:42.14:0,42,2123	0/0:33,0:33:93.32:0,93,6004	0/0:45,0:45:99:0,108,6807	0/0:28,0:28:75.23:0,75,4226	0/0:31,0:31:81.28:0,81,5237	0/0:28,0:28:75.26:0,75,4695	0/0:23,0:23:63.16:0,63,4014	0/0:29,0:29:78.27:0,78,4725	0/0:31,0:31:81.27:0,81,4561	0/0:12,0:12:33.09:0,33,1978
chr10	2451031	.	CAA	C	2206.28	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=14.093;DP=662;FS=0.879;HRun=3;HaplotypeScore=97.2716;InbreedingCoeff=0.9506;MQ=85.35;MQ0=0;MQRankSum=-9.829;QD=22.75;ReadPosRankSum=-0.716;VQSLOD=1.4501;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:90.25:0,90,1666	0/0:12,0:12:33.11:0,33,630	0/0:19,0:19:30.95:0,31,592	0/0:26,0:26:60.82:0,61,1168	0/0:32,0:32:96.26:0,96,1751	0/0:29,0:29:87.29:0,87,1649	0/0:24,0:24:72.23:0,72,1329	1/1:13,28:41:92.99:838,93,0	0/0:23,0:23:63.20:0,63,1155	0/0:31,0:31:93.29:0,93,1700	0/0:26,0:26:75.24:0,75,1381	0/0:19,0:19:57.19:0,57,1069	0/0:22,0:22:66.20:0,66,1210	0/0:20,0:20:60.21:0,60,1159	0/0:33,0:32:96.33:0,96,1855	0/0:24,0:24:72.24:0,72,1359	0/0:24,0:24:66.21:0,66,1232	0/0:2,0:2:3.01:0,3,58	0/0:26,0:26:75.23:0,75,1347	0/0:35,0:35:99:0,105,1901	0/0:25,0:25:75.24:0,75,1384	0/0:16,0:16:48.15:0,48,894	0/0:19,0:19:51.17:0,51,985	0/0:22,0:22:63.20:0,63,1170	0/0:25,0:25:75.24:0,75,1371	1/1:4,18:22:63.07:638,63,0	1/1:6,22:28:77.96:720,78,0	1/1:0,6:6:18.02:170,18,0
chr10	2451035	.	CAT	C	2312.48	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=13.971;DP=652;FS=0.000;HRun=0;HaplotypeScore=95.8078;InbreedingCoeff=0.9506;MQ=84.75;MQ0=0;MQRankSum=-9.027;QD=26.89;ReadPosRankSum=-0.253;VQSLOD=4.5095;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:87.30:0,87,1736	0/0:11,0:11:33.11:0,33,665	0/0:16,0:16:33.52:0,34,517	0/0:27,0:27:71.44:0,71,1269	0/0:33,0:33:96.33:0,96,1921	0/0:30,0:30:90.28:0,90,1755	0/0:25,0:25:75.26:0,75,1507	1/1:4,28:32:86.63:853,87,0	0/0:21,0:21:63.16:0,63,1202	0/0:33,0:33:99:0,99,1936	0/0:25,0:25:72.23:0,72,1425	0/0:22,0:22:66.23:0,66,1329	0/0:22,0:22:66.23:0,66,1328	0/0:21,0:21:63.22:0,63,1270	0/0:33,0:32:96.33:0,96,1935	0/0:25,0:25:75.24:0,75,1464	0/0:23,0:23:66.23:0,66,1322	0/0:1,0:1:3.01:0,3,61	0/0:26,0:26:78.26:0,78,1541	0/0:36,0:36:99:0,108,2135	0/0:25,0:25:75.21:0,75,1398	0/0:16,0:16:48.16:0,48,974	0/0:19,0:19:57.18:0,57,1120	0/0:23,0:23:69.19:0,69,1266	0/0:23,0:23:69.23:0,69,1361	1/1:2,18:20:60.09:646,60,0	1/1:6,22:28:77.55:786,78,0	1/1:0,6:6:18.04:187,18,0
chr10	2451214	.	GAGAC	G	3383.26	PASS	AB=0.647;AC=7;AF=0.125;AN=56;BaseQRankSum=9.556;DP=718;FS=4.369;HRun=0;HaplotypeScore=139.7077;InbreedingCoeff=0.7742;MQ=72.27;MQ0=4;MQRankSum=-6.353;QD=36.77;ReadPosRankSum=0.170;VQSLOD=3.6329;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:47.86:0,48,983	0/0:8,0:8:24.08:0,24,619	0/0:50,0:36:80.23:0,80,1560	0/0:67,0:33:29.09:0,29,871	0/0:37,0:37:99:0,111,2663	0/0:25,0:25:63.68:0,64,1456	0/0:16,0:16:48.16:0,48,1214	1/1:5,22:27:66.21:1121,66,0	0/0:18,0:18:51.16:0,51,1229	0/0:21,0:21:60.21:0,60,1474	0/0:29,0:29:75.24:0,75,1751	0/0:28,0:28:72.23:0,72,1737	0/0:23,0:23:57.20:0,57,1411	0/0:16,0:16:42.13:0,42,889	0/0:24,0:24:59.78:0,60,1459	0/0:19,0:19:51.17:0,51,1315	0/0:20,0:20:36.09:0,36,913	0/0:12,0:12:25.19:0,25,770	0/0:19,0:19:50.37:0,50,1124	0/0:39,0:39:99:0,105,2557	0/0:11,0:11:26.65:0,27,642	0/0:40,0:40:96.26:0,96,2213	0/0:33,0:33:75.23:0,75,1762	0/0:29,0:29:75.26:0,75,1831	0/0:11,0:11:30.10:0,30,757	1/1:2,27:29:3.28:1288,3,0	1/1:2,23:25:48.10:816,48,0	0/1:5,6:11:31.53:158,0,32
chr10	2451250	.	CAG	C	1264.53	PASS	AB=0.931;AC=30;AF=0.577;AN=52;BaseQRankSum=2.396;DP=637;FS=3.560;HRun=0;HaplotypeScore=115.0994;InbreedingCoeff=0.2035;MQ=55.94;MQ0=17;MQRankSum=1.945;QD=2.90;ReadPosRankSum=1.655;VQSLOD=2.3238;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:3.01:0,3,32	1/1:5,3:9:5.84:47,6,0	./.	./.	0/1:35,0:34:8.43:8,0,164	1/1:17,9:26:15.04:165,15,0	0/0:15,4:18:4.82:0,5,49	1/1:34,0:30:0.17:5,0,0	1/1:17,4:21:20.92:212,21,0	0/1:22,1:22:71.45:71,0,252	0/1:31,0:31:0.06:0,0,393	0/1:12,8:23:8.66:132,0,9	1/1:11,7:19:8.85:80,9,0	1/1:8,6:15:5.85:47,6,0	0/1:18,0:17:17.98:18,0,144	0/0:15,0:15:4.32:0,4,206	0/0:13,0:14:5.63:0,6,31	0/1:10,1:14:15.28:15,0,136	0/1:14,0:14:9.93:27,0,10	1/1:16,10:26:7.93:75,8,0	1/1:15,3:17:8.67:76,9,0	1/1:25,3:26:16.16:146,16,0	0/1:19,3:21:54.34:54,0,55	1/1:16,16:36:6.57:188,7,0	0/0:27,0:27:36.86:0,37,436	0/0:26,0:25:8.68:0,9,59	1/1:24,0:24:13.02:59,13,0	0/0:9,0:7:0.89:0,1,2
chr10	2451281	.	AGAGAGAGACAGG	A	2659.18	PASS	AB=1.000;AC=12;AF=0.214;AN=56;BaseQRankSum=8.969;DP=564;FS=20.041;HRun=0;HaplotypeScore=184.2953;InbreedingCoeff=0.8384;MQ=56.97;MQ0=8;MQRankSum=-9.494;QD=21.98;ReadPosRankSum=-1.160;VQSLOD=1.5680;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:22:3.01:35,3,0	0/0:11,0:11:27.07:0,27,562	0/0:12,0:6:17.44:0,17,204	0/1:14,0:7:0.01:1,0,0	0/0:27,0:27:60.17:0,60,1383	0/0:29,0:29:63.14:0,63,1145	0/0:24,0:22:51.02:0,51,794	1/1:4,33:35:99:1255,101,0	0/0:18,0:18:51.10:0,51,1267	0/0:22,0:22:66.22:0,66,1952	0/0:25,0:25:60.16:0,60,1751	0/0:19,0:19:40.36:0,40,905	0/0:20,0:20:34.21:0,34,561	0/0:18,0:18:26.98:0,27,501	0/0:14,0:14:33.11:0,33,811	0/0:13,0:13:36.11:0,36,999	1/1:11,0:11:13.20:170,13,0	0/0:17,0:17:26.01:0,26,913	0/0:13,0:13:31.40:0,31,456	0/0:26,0:26:57.04:0,57,956	0/0:18,0:16:32.85:0,33,717	0/0:26,0:24:50.90:0,51,1280	0/0:23,0:21:51.12:0,51,1066	0/0:32,0:32:60.18:0,60,1345	0/0:36,0:36:87.16:0,87,2405	1/1:12,0:12:6.03:395,6,0	1/1:12,6:18:30.46:911,30,0	0/1:6,0:5:0.91:55,0,1
chr10	2451292	.	GGC	G	171.89	PASS	AB=0.967;AC=8;AF=0.143;AN=56;BaseQRankSum=9.284;DP=524;FS=46.892;HRun=0;HaplotypeScore=102.0812;InbreedingCoeff=0.6514;MQ=60.05;MQ0=7;MQRankSum=-5.164;QD=1.89;ReadPosRankSum=-2.285;VQSLOD=-0.4412;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:22:1.55:0,2,4	0/0:11,0:11:27.09:0,27,526	0/0:26,0:13:39.02:0,39,588	0/0:25,1:10:5.27:0,5,121	0/0:19,0:19:45.15:0,45,909	0/0:19,0:19:45.15:0,45,874	0/0:19,0:17:39.07:0,39,762	0/1:36,0:33:8.23:52,0,8	0/0:16,0:16:48.16:0,48,906	0/0:19,0:19:57.20:0,57,1128	0/0:22,0:22:60.21:0,60,1182	0/0:20,0:20:50.83:0,51,886	0/0:16,0:16:36.12:0,36,681	0/0:15,0:15:27.01:0,27,517	0/0:16,0:16:42.12:0,42,818	0/0:13,0:13:35.61:0,36,673	1/1:10,0:13:2.22:57,2,0	0/0:17,0:17:35.60:0,36,697	0/0:15,0:14:39.13:0,39,764	0/0:17,0:17:42.13:0,42,802	0/0:14,0:12:27.08:0,27,526	0/0:22,0:20:54.18:0,54,1027	0/0:15,0:13:36.02:0,36,685	0/0:27,0:27:57.16:0,57,996	0/0:26,0:26:69.13:0,69,1382	0/1:13,1:14:1.80:66,0,2	1/1:23,0:23:13.45:80,13,0	1/1:3,2:5:7.52:52,8,0
chr10	2452097	.	C	CGA	1587.38	PASS	AB=0.948;AC=16;AF=0.286;AN=56;BaseQRankSum=-4.823;DP=549;FS=0.489;HRun=0;HaplotypeScore=173.1606;InbreedingCoeff=-0.0193;MQ=91.26;MQ0=3;MQRankSum=-0.709;QD=5.34;ReadPosRankSum=-7.062;VQSLOD=0.9038;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:38.42:0,38,283	0/0:9,0:9:20.76:0,21,145	0/1:32,0:27:18.83:19,0,105	0/1:62,0:47:31.16:31,0,220	0/1:20,0:20:3.90:4,0,88	0/0:12,0:12:0.22:0,0,129	0/0:21,0:21:34.08:0,34,236	1/1:19,3:20:35.98:384,36,0	0/0:16,0:16:32.45:0,32,226	0/1:29,0:29:19.20:19,0,276	0/1:19,0:19:29.98:30,0,132	0/0:18,0:18:32.58:0,33,224	0/1:12,0:12:4.27:4,0,94	0/0:18,0:18:11.56:0,12,211	0/0:23,0:23:9.36:0,9,169	0/1:16,0:16:5.33:5,0,143	0/0:22,0:22:41.32:0,41,266	0/1:11,0:11:17.02:17,0,107	0/1:11,0:11:12.90:13,0,53	0/0:18,0:18:9.49:0,9,185	0/0:23,0:23:7:0,7,158	0/1:18,0:18:5.27:5,0,194	0/0:18,0:18:4.15:0,4,141	0/0:25,0:25:20.47:0,20,182	0/0:6,0:6:8.44:0,8,60	1/1:6,17:23:43.46:839,43,0	0/1:5,5:10:2.93:244,0,3	0/1:6,3:9:26.27:131,0,26
chr10	2452104	.	GAT	G	401.01	PASS	AB=0.973;AC=15;AF=0.268;AN=56;BaseQRankSum=-2.233;DP=504;FS=2.706;HRun=0;HaplotypeScore=171.4143;InbreedingCoeff=-0.2236;MQ=90.15;MQ0=3;MQRankSum=1.368;QD=1.43;ReadPosRankSum=-8.808;VQSLOD=0.3912;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:18,2:20:39.02:0,39,364	0/0:8,0:8:20.20:0,20,157	0/1:27,0:24:18.41:18,0,109	0/1:61,1:44:63.08:63,0,266	0/1:16,2:18:65.08:65,0,121	0/1:11,0:11:0.60:1,0,173	0/0:19,0:19:35.36:0,35,312	1/1:18,0:18:8.35:113,8,0	0/1:16,0:16:8.43:8,0,263	0/0:24,0:24:11.99:0,12,395	0/1:16,2:18:74.83:75,0,190	0/0:16,0:17:32.99:0,33,297	0/0:10,0:10:17.75:0,18,148	0/0:16,0:16:33.85:0,34,306	0/0:21,0:21:8.69:0,9,229	0/1:13,1:14:37.87:38,0,194	0/0:17,1:18:41.95:0,42,357	0/0:9,0:9:1.08:0,1,149	0/1:11,0:11:69.21:75,0,69	0/0:16,0:16:11.47:0,11,256	0/0:23,0:23:8.45:0,8,224	0/1:16,0:16:25.15:25,0,272	0/0:15,1:16:5.97:0,6,202	0/1:24,1:25:10.01:10,0,227	0/1:6,0:6:12.93:13,0,68	0/1:22,0:22:37.44:37,0,42	0/1:11,0:10:9.21:9,0,38	0/0:7,0:7:2.46:0,2,62
chr10	2452688	.	TC	T	3811.22	PASS	AB=0.972;AC=48;AF=0.857;AN=56;BaseQRankSum=0.873;DP=502;FS=12.120;HRun=4;HaplotypeScore=146.6392;InbreedingCoeff=0.4827;MQ=57.06;MQ0=0;MQRankSum=9.429;QD=7.89;ReadPosRankSum=4.498;VQSLOD=0.0094;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:38,5:43:58.48:364,58,0	0/1:4,0:4:0.73:5,0,1	0/0:7,1:4:6.28:0,6,56	0/0:9,1:2:0.89:0,1,2	1/1:10,2:12:13.48:80,13,0	1/1:19,0:19:36.83:163,37,0	1/1:24,1:24:18.01:137,18,0	1/1:23,0:23:12.43:89,12,0	1/1:13,0:13:23.71:121,24,0	1/1:11,0:11:24.75:143,25,0	1/1:8,0:7:12.31:66,12,0	1/1:14,0:14:21.97:105,22,0	1/1:23,0:23:39.47:211,39,0	1/1:20,1:21:42.93:246,43,0	1/1:22,0:22:24.23:160,24,0	1/1:27,0:27:42.02:260,42,0	1/1:41,2:43:79.31:371,79,0	1/1:21,0:21:34.42:134,34,0	1/1:7,0:7:10.96:52,11,0	1/1:12,0:12:11.70:59,12,0	1/1:43,3:45:74.19:462,74,0	1/1:5,1:6:4.61:24,5,0	1/1:9,0:9:17.55:64,18,0	1/1:26,0:26:48.92:183,49,0	1/1:11,1:12:11.46:66,11,0	1/1:18,1:19:26.22:165,26,0	0/1:16,1:17:15.41:81,0,15	0/0:1,0:1:0.47:0,0,1
chr10	2454984	.	T	TTC	2849.66	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-9.245;DP=729;FS=7.245;HRun=0;HaplotypeScore=85.5010;InbreedingCoeff=0.9954;MQ=77.77;MQ0=1;MQRankSum=-0.272;QD=30.32;ReadPosRankSum=-1.691;VQSLOD=4.4432;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:54.17:0,54,675	0/0:19,0:19:48.14:0,48,588	0/0:37,0:37:57.11:0,57,681	0/0:26,0:24:32.90:0,33,433	0/0:34,0:34:93.28:0,93,1140	0/0:25,0:25:63.19:0,63,777	0/0:15,0:15:39.12:0,39,488	1/1:12,15:27:45.14:714,45,0	0/0:30,0:30:78.24:0,78,963	0/0:34,0:34:90.28:0,90,1108	0/0:22,0:22:60.19:0,60,750	0/0:31,0:31:84.27:0,84,1046	0/0:22,0:22:54.17:0,54,674	0/0:25,0:25:72.23:0,72,900	0/0:19,0:19:54.16:0,54,664	0/0:34,0:34:93.30:0,93,1163	0/0:26,0:26:75.21:0,75,922	0/0:16,0:16:42.13:0,42,523	0/0:22,0:22:39.12:0,39,487	0/0:46,0:46:99:0,114,1401	0/0:20,0:20:57.18:0,57,712	0/0:35,0:35:99:0,102,1276	0/0:31,0:31:81.24:0,81,999	0/0:17,0:17:39.12:0,39,488	0/0:28,0:28:68.87:0,69,848	1/1:4,24:29:34.70:1074,35,0	1/1:4,23:27:60.20:973,60,0	1/1:4,7:11:15.05:248,15,0
chr10	2457003	.	TACCA	T	1113.05	PASS	AC=2;AF=0.037;AN=54;BaseQRankSum=6.746;DP=708;FS=12.008;HRun=0;HaplotypeScore=112.2639;InbreedingCoeff=0.9046;MQ=64.24;MQ0=4;MQRankSum=0.952;QD=24.20;ReadPosRankSum=-0.280;VQSLOD=2.6615;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,36:46:75.26:1208,75,0	0/0:9,0:9:21.07:0,21,506	0/0:32,0:26:12.04:0,12,269	0/0:37,0:34:21.07:0,21,593	0/0:17,0:17:42.14:0,42,988	0/0:23,0:23:42.14:0,42,1007	0/0:30,0:30:51.17:0,51,1180	0/0:33,0:33:51.11:0,51,815	0/0:41,0:41:93.29:0,93,2101	0/0:24,0:24:45.15:0,45,1009	0/0:27,0:27:51.16:0,51,1050	0/0:16,0:16:39.12:0,39,891	0/0:27,0:27:51.18:0,51,1190	0/0:27,0:27:51.16:0,51,1180	0/0:28,0:28:69.18:0,69,1475	0/0:25,0:25:51.16:0,51,1134	0/0:11,0:24:21.01:0,21,314	0/0:5,0:5:9.03:0,9,181	0/0:24,0:25:21.07:0,21,488	0/0:24,0:24:45.15:0,45,1083	0/0:35,0:35:66.21:0,66,1523	0/0:20,0:20:39.13:0,39,867	0/0:20,0:20:54.17:0,54,1231	0/0:26,0:26:54.17:0,54,1190	0/0:27,0:27:48.16:0,48,1093	0/0:31,0:31:66.23:0,66,1540	0/0:27,0:27:57.18:0,57,1307	./.
chr10	2460432	.	TA	T	9408.24	PASS	AC=52;AF=0.963;AN=54;BaseQRankSum=-2.270;DP=289;FS=0.000;HRun=1;HaplotypeScore=38.0005;InbreedingCoeff=0.5000;MQ=41.23;MQ0=0;MQRankSum=-1.870;QD=33.01;ReadPosRankSum=0.490;VQSLOD=4.2273;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,13:11:18.06:243,18,0	1/1:0,15:15:42.14:577,42,0	1/1:1,3:3:3.01:42,3,0	0/0:2,2:1:3.01:0,3,47	1/1:0,16:15:39.06:519,39,0	1/1:0,10:10:21.07:292,21,0	1/1:0,8:7:17.99:226,18,0	1/1:0,6:3:8.98:89,9,0	1/1:0,6:6:18.06:248,18,0	1/1:0,20:19:57.19:785,57,0	1/1:0,14:14:30.10:417,30,0	1/1:0,15:15:45.08:603,45,0	1/1:0,6:6:12.04:166,12,0	1/1:0,9:8:24.08:334,24,0	1/1:0,10:10:24.08:328,24,0	1/1:0,10:10:30.10:417,30,0	1/1:1,12:13:28.64:379,29,0	1/1:0,5:5:12.04:167,12,0	1/1:0,6:4:12.04:163,12,0	1/1:0,21:21:60.15:813,60,0	1/1:0,4:4:9.03:125,9,0	1/1:0,9:9:27.09:375,27,0	1/1:0,15:15:39.13:542,39,0	1/1:0,10:10:10.95:165,11,0	1/1:0,8:8:24.08:334,24,0	1/1:0,18:18:48.13:647,48,0	1/1:1,13:13:30.10:411,30,0	./.
chr10	2461864	.	CA	C	920.39	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=6.213;DP=582;FS=0.000;HRun=11;HaplotypeScore=61.2455;InbreedingCoeff=0.6441;MQ=55.30;MQ0=15;MQRankSum=-0.454;QD=12.78;ReadPosRankSum=3.486;VQSLOD=3.5481;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,20:25:63.04:486,63,0	0/0:7,0:8:20.88:0,21,199	0/1:16,0:3:15.17:15,0,26	0/0:12,0:7:20.49:0,20,163	0/0:29,0:31:72.01:0,72,751	0/0:32,2:34:46.94:0,47,898	0/0:23,0:19:14.45:0,14,358	0/0:19,0:25:47.76:0,48,305	0/0:12,1:13:5.37:0,5,237	0/0:22,0:21:33.08:0,33,352	0/0:19,1:21:56.82:0,57,552	0/0:15,0:15:9.11:0,9,283	0/0:12,1:13:5.40:0,5,248	0/0:13,1:14:11.42:0,11,305	0/0:22,0:24:53.95:0,54,549	0/0:18,2:20:20.45:0,20,410	1/1:3,27:30:67.95:548,68,0	0/0:34,2:35:24.70:0,25,633	0/0:28,1:19:17.46:0,17,391	0/0:17,1:18:48.12:0,48,511	0/0:19,1:19:17.93:0,18,389	0/0:15,1:14:11.42:0,11,312	0/0:23,0:21:50.43:0,50,491	0/0:19,0:19:33.54:0,34,345	0/0:7,0:7:21.05:0,21,224	0/0:6,0:19:39.27:0,39,197	0/0:8,0:25:41.19:0,41,238	0/0:8,0:10:9.30:0,9,63
chr10	2464017	.	T	TTCAGA	8029.03	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-12.972;DP=656;FS=8.761;HRun=0;HaplotypeScore=106.2516;InbreedingCoeff=0.9942;MQ=55.34;MQ0=11;MQRankSum=-5.822;QD=79.50;ReadPosRankSum=-0.997;VQSLOD=6.6572;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,99,2029	0/0:11,0:11:33.11:0,33,736	0/0:35,0:15:36.04:0,36,603	0/0:16,0:5:15.02:0,15,276	0/0:35,0:35:99:0,105,2199	0/0:30,0:30:84.29:0,84,1825	0/0:16,0:16:48.16:0,48,987	1/1:6,20:31:90.29:2517,90,0	0/0:13,0:13:39.13:0,39,826	0/0:25,0:25:75.24:0,75,1561	0/0:22,0:22:66.23:0,66,1469	0/0:20,0:20:60.21:0,60,1295	0/0:27,0:27:78.25:0,78,1675	0/0:19,0:19:54.17:0,54,1137	0/0:17,0:17:51.15:0,51,1006	0/0:24,0:24:66.21:0,66,1378	0/0:25,0:25:69.22:0,69,1465	0/0:20,0:20:60.20:0,60,1274	0/0:20,0:14:39.13:0,39,857	0/0:32,0:32:96.33:0,96,2139	0/0:12,0:12:36.12:0,36,757	0/0:16,0:16:48.16:0,48,976	0/0:40,0:40:99:0,114,2476	0/0:14,0:14:39.13:0,39,823	0/0:29,0:29:87.30:0,87,1873	1/1:1,20:22:66.20:2028,66,0	1/1:2,29:35:87.30:2806,87,0	1/1:0,7:8:21.07:678,21,0
chr10	2465790	.	CAACAA	C	1356.91	PASS	AB=0.543;AC=3;AF=0.054;AN=56;BaseQRankSum=8.060;DP=661;FS=2.381;HRun=0;HaplotypeScore=120.3993;InbreedingCoeff=0.5999;MQ=74.73;MQ0=3;MQRankSum=-1.593;QD=27.69;ReadPosRankSum=3.048;VQSLOD=3.3817;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,17:24:23.52:593,24,0	0/0:12,0:12:30.09:0,30,764	0/0:31,0:23:52.41:0,52,1235	0/0:43,0:35:39.46:0,39,1255	0/0:32,0:32:87.30:0,87,2521	0/0:32,0:32:69.22:0,69,1887	0/0:18,0:18:48.16:0,48,1349	0/0:20,0:20:51.18:0,51,1442	0/0:18,0:18:39.13:0,39,1131	0/0:25,0:25:51.17:0,51,1365	0/0:32,0:32:81.27:0,81,2179	0/0:10,0:10:21.06:0,21,546	0/0:23,0:23:51.13:0,51,1408	0/0:20,0:20:48.16:0,48,1374	0/0:19,0:19:51.17:0,51,1433	0/0:26,0:26:63.22:0,63,1825	0/1:4,21:25:33.08:869,0,33	0/0:13,0:13:27.09:0,27,768	0/0:18,0:18:42.14:0,42,1170	0/0:38,0:38:87.28:0,87,2363	0/0:29,0:29:69.24:0,69,2000	0/0:16,0:16:39.13:0,39,1129	0/0:29,0:29:44.26:0,44,1848	0/0:24,1:25:6.27:0,6,1636	0/0:21,0:21:54.18:0,54,1405	0/0:26,0:26:72.24:0,72,2028	0/0:24,0:24:54.18:0,54,1437	0/0:12,0:12:33.11:0,33,932
chr10	2465962	.	C	CT	2541.78	PASS	AB=0.923;AC=11;AF=0.196;AN=56;BaseQRankSum=-8.007;DP=514;FS=7.335;HRun=9;HaplotypeScore=48.4910;InbreedingCoeff=0.8913;MQ=72.65;MQ0=0;MQRankSum=0.915;QD=21.01;ReadPosRankSum=-1.934;VQSLOD=3.2777;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:47.97:0,48,412	0/0:4,0:4:12:0,12,104	0/1:11,1:12:5.54:6,0,89	0/0:11,0:9:13.38:0,13,107	0/0:34,0:34:92.92:0,93,795	0/0:28,0:28:71.98:0,72,625	0/0:22,0:22:50.97:0,51,439	1/1:9,25:34:75.20:830,75,0	0/0:18,0:18:44.94:0,45,382	0/0:27,0:27:68.98:0,69,599	0/0:31,0:31:89.98:0,90,781	0/0:10,0:10:23.98:0,24,208	0/0:15,0:15:41.99:0,42,365	0/0:12,0:12:35.99:0,36,313	0/0:20,0:20:56.99:0,57,495	0/0:23,0:23:65.98:0,66,573	1/1:2,16:18:25.08:505,25,0	0/0:9,0:9:17.99:0,18,156	0/0:15,0:15:35.99:0,36,313	0/0:22,0:22:50.97:0,51,439	0/0:6,0:6:14.99:0,15,130	0/0:15,0:15:35.99:0,36,312	0/0:22,0:22:56.98:0,57,494	0/0:16,0:15:47.95:0,48,410	0/0:16,0:16:41.98:0,42,365	1/1:6,25:31:52.12:785,52,0	1/1:1,18:20:38.83:412,39,0	1/1:0,5:6:17.88:180,18,0
chr10	2469471	.	GGTGTGT	G	1333.33	PASS	AB=0.710;AC=7;AF=0.125;AN=56;BaseQRankSum=3.651;DP=519;FS=0.786;HRun=0;HaplotypeScore=109.0227;InbreedingCoeff=0.6743;MQ=61.81;MQ0=24;MQRankSum=-0.244;QD=23.39;ReadPosRankSum=-0.536;VQSLOD=3.1426;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:30:38.48:0,38,787	0/0:5,0:5:6.02:0,6,122	0/0:44,0:25:19.30:0,19,379	0/0:37,0:21:6.75:0,7,292	0/0:11,0:8:24.08:0,24,555	0/0:27,0:25:39.01:0,39,876	0/0:20,0:18:36.12:0,36,863	0/1:13,9:20:44.21:495,0,44	0/0:22,0:22:22.42:0,22,475	0/0:20,0:17:30.07:0,30,652	0/0:18,0:17:27.07:0,27,599	0/0:15,0:15:33.11:0,33,655	0/0:17,0:16:30.07:0,30,642	0/0:12,0:11:12.04:0,12,322	0/0:16,0:16:24.05:0,24,497	0/0:13,0:13:36.12:0,36,815	0/0:12,0:12:20.28:0,20,366	0/0:10,0:9:9.03:0,9,180	0/0:12,0:9:9.03:0,9,259	0/0:21,0:20:36.08:0,36,825	0/0:29,0:26:24.05:0,24,470	0/0:11,0:10:24.08:0,24,489	0/0:19,0:19:30.89:0,31,628	0/0:25,0:25:33.05:0,33,775	0/0:12,0:10:27.07:0,27,611	1/1:8,13:21:12.05:709,12,0	1/1:10,2:9:9.02:137,9,0	1/1:2,0:2:6.02:124,6,0
chr10	2469548	.	GGA	G	225.65	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.019;DP=459;FS=4.577;HRun=0;HaplotypeScore=58.8920;InbreedingCoeff=0.5684;MQ=43.08;MQ0=56;MQRankSum=-3.198;QD=9.40;ReadPosRankSum=-3.373;VQSLOD=2.2465;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,13:21:27.51:319,28,0	0/0:4,0:4:12.04:0,12,201	0/0:60,0:10:13.36:0,13,306	0/0:85,0:10:19.58:0,20,287	0/0:13,0:13:24.08:0,24,402	0/0:11,0:11:17.59:0,18,270	0/0:15,0:15:36.12:0,36,602	0/0:9,0:6:3.01:0,3,35	0/0:7,0:5:8.69:0,9,150	0/0:17,0:13:29.75:0,30,413	0/0:17,0:17:33.11:0,33,552	0/0:11,0:9:24.08:0,24,401	0/0:15,0:14:36.08:0,36,565	0/0:13,0:12:17.93:0,18,294	0/0:12,0:8:24.08:0,24,400	0/0:6,0:5:12.04:0,12,201	0/0:13,0:11:23.72:0,24,307	0/0:8,0:8:24.08:0,24,381	0/0:14,0:9:18.06:0,18,292	0/0:10,0:10:21.07:0,21,348	0/0:12,0:10:21.07:0,21,331	0/0:13,0:12:21.07:0,21,351	0/0:12,0:11:21.07:0,21,351	0/0:20,0:19:24.08:0,24,380	0/0:21,0:17:27.09:0,27,452	0/0:7,0:5:9.88:0,10,101	0/0:8,0:7:5.93:0,6,40	0/0:2,0:1:3.01:0,3,38
chr10	2469582	.	G	GGA	778.87	PASS	AB=0.937;AC=29;AF=0.630;AN=46;BaseQRankSum=-1.224;DP=422;FS=0.000;HRun=0;HaplotypeScore=90.0817;InbreedingCoeff=0.3577;MQ=44.10;MQ0=39;MQRankSum=-1.128;QD=3.23;ReadPosRankSum=-0.683;VQSLOD=2.0704;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:17:2.06:0,2,8	0/0:5,0:5:1.71:0,2,5	./.	./.	1/1:13,0:13:5.61:46,6,0	1/1:22,0:20:3.46:29,3,0	0/1:12,0:11:0:0,0,0	1/1:9,0:4:5.69:18,6,0	1/1:15,1:16:8.72:106,9,0	1/1:30,0:26:21.62:202,22,0	0/1:19,0:19:14.22:19,0,14	1/1:13,0:12:8.89:97,9,0	0/0:9,0:11:8.59:0,9,58	1/1:14,0:11:3.01:45,3,0	1/1:14,1:11:3.68:15,4,0	1/1:11,0:10:11.22:98,11,0	1/1:10,0:9:3.01:34,3,0	1/1:7,1:7:5.93:62,6,0	0/0:10,0:8:3.84:0,4,17	0/0:14,0:15:2.29:0,2,6	0/0:23,0:17:7.68:0,8,53	1/1:11,1:11:2.97:20,3,0	0/0:20,0:18:2.63:0,3,12	1/1:18,0:18:7.79:105,8,0	0/1:13,4:16:20.52:21,0,44	./.	./.	./.
chr10	2469627	.	GGA	G	131.66	PASS	AB=0.951;AC=13;AF=0.241;AN=54;BaseQRankSum=6.153;DP=520;FS=33.967;HRun=0;HaplotypeScore=85.7853;InbreedingCoeff=-0.1670;MQ=46.75;MQ0=40;MQRankSum=-1.435;QD=0.56;ReadPosRankSum=-2.509;VQSLOD=-0.2451;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:19,0:18:16.42:16,0,68	0/0:5,0:5:9.02:0,9,183	0/0:52,0:4:5.19:0,5,120	0/1:81,0:14:10.95:11,0,199	0/0:21,0:21:41.34:0,41,727	0/0:24,2:25:45.04:0,45,812	0/0:16,1:17:0.40:0,0,687	0/1:10,0:9:7.20:7,0,142	0/0:18,0:18:8.22:0,8,535	0/1:19,1:21:2.03:2,0,837	0/0:18,0:18:25.98:0,26,670	0/1:14,1:15:9.38:9,0,372	0/1:11,0:9:27.57:28,0,213	0/0:10,0:9:24.08:0,24,478	0/0:14,0:13:2.96:0,3,333	0/0:14,0:13:37.37:0,37,717	0/1:9,0:9:14.63:15,0,185	0/0:7,0:6:6.67:0,7,236	0/1:19,0:16:1.44:1,0,783	0/0:22,0:21:26.05:0,26,734	0/0:18,0:18:29.28:0,29,777	0/1:12,1:12:2.47:2,0,325	0/0:18,2:18:14.94:0,15,303	0/1:22,0:20:34.01:34,0,612	0/0:16,0:16:21.41:0,21,466	0/1:5,6:5:31.75:104,0,32	1/1:0,2:2:3.01:34,3,0	./.
chr10	2469629	.	AAG	A	308.60	PASS	AC=2;AF=0.037;AN=54;BaseQRankSum=5.866;DP=534;FS=2.130;HRun=0;HaplotypeScore=88.2871;InbreedingCoeff=0.6581;MQ=47.89;MQ0=38;MQRankSum=-1.366;QD=16.24;ReadPosRankSum=-2.229;VQSLOD=2.9320;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,14:18:26.44:402,26,0	0/0:4,0:4:9.03:0,9,149	0/0:57,0:7:14.20:0,14,212	0/0:85,0:15:5.69:0,6,205	0/0:22,0:22:41.87:0,42,677	0/0:26,0:25:39.13:0,39,629	0/0:18,0:18:37.54:0,38,629	0/0:15,0:14:25.79:0,26,258	0/0:19,0:19:19.52:0,20,465	0/0:22,0:22:45.98:0,46,680	0/0:17,0:17:39.13:0,39,628	0/0:15,0:15:21.07:0,21,346	0/0:12,0:10:22.56:0,23,290	0/0:10,0:9:24.08:0,24,396	0/0:13,0:13:21.01:0,21,319	0/0:13,0:13:36.12:0,36,594	0/0:9,0:9:7.31:0,7,185	0/0:7,0:6:12.04:0,12,198	0/0:18,0:15:42.14:0,42,690	0/0:22,0:21:39.08:0,39,607	0/0:19,0:19:28.94:0,29,674	0/0:12,0:11:18.06:0,18,295	0/0:20,0:18:14.94:0,15,248	0/0:21,0:20:33.11:0,33,545	0/0:17,0:17:28.34:0,28,442	0/0:13,0:7:7.48:0,7,90	0/0:3,0:3:1.25:0,1,3	./.
chr10	2469643	.	GA	G	568.02	PASS	AB=1.000;AC=5;AF=0.093;AN=54;BaseQRankSum=-0.849;DP=603;FS=20.623;HRun=3;HaplotypeScore=81.2574;InbreedingCoeff=0.6682;MQ=53.54;MQ0=36;MQRankSum=-0.628;QD=11.59;ReadPosRankSum=-2.960;VQSLOD=0.3165;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:22:42.52:0,43,333	0/0:5,0:5:12.04:0,12,169	0/0:76,0:20:46.34:0,46,580	0/0:101,0:24:39.02:0,39,407	0/0:19,0:19:51.17:0,51,723	0/0:27,0:26:48.12:0,48,657	0/0:17,0:17:45.15:0,45,623	0/1:22,0:21:19.71:334,0,20	0/0:16,0:16:32.32:0,32,439	0/0:23,0:23:51.06:0,51,699	0/0:18,0:18:48.15:0,48,657	0/0:12,0:12:21.07:0,21,302	0/0:17,0:15:32.99:0,33,413	0/0:11,0:10:27.09:0,27,384	0/0:15,0:15:28.25:0,28,344	0/0:12,0:12:36.12:0,36,518	0/0:9,0:10:8.09:0,8,141	0/0:5,0:5:12.04:0,12,173	0/0:19,0:16:48.12:0,48,659	0/0:21,0:21:51.16:0,51,701	0/0:22,0:23:56.87:0,57,785	0/0:13,1:13:30.10:0,30,417	0/0:22,0:21:36.09:0,36,462	0/0:19,0:19:42.08:0,42,548	0/0:23,0:23:49.40:0,49,650	1/1:15,3:11:7.74:251,8,0	1/1:7,2:9:9.01:97,9,0	./.
chr10	2469644	.	A	AG	753.02	PASS	AB=0.575;AC=5;AF=0.093;AN=54;BaseQRankSum=-1.692;DP=594;FS=19.812;HRun=1;HaplotypeScore=79.6091;InbreedingCoeff=0.6758;MQ=55.05;MQ0=35;MQRankSum=-1.102;QD=15.06;ReadPosRankSum=-3.070;VQSLOD=1.5681;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:22:55.46:0,55,461	0/0:5,0:5:12.04:0,12,165	0/0:76,0:20:47.34:0,47,572	0/0:102,0:25:33.71:0,34,354	0/0:18,0:18:51.17:0,51,706	0/0:25,0:24:51.09:0,51,662	0/0:15,0:15:43.96:0,44,587	0/1:6,17:22:29.61:420,0,30	0/0:15,0:15:32.14:0,32,435	0/0:23,0:23:50.38:0,50,668	0/0:18,0:18:48.15:0,48,650	0/0:10,0:10:21.07:0,21,294	0/0:17,0:15:32.86:0,33,391	0/0:11,0:10:26.95:0,27,373	0/0:14,0:14:28.24:0,28,327	0/0:12,0:12:36.12:0,36,502	0/0:10,0:10:6.99:0,7,154	0/0:5,0:5:12.04:0,12,168	0/0:18,0:16:48.16:0,48,662	0/0:23,0:23:51.16:0,51,686	0/0:22,0:22:47.29:0,47,756	0/0:13,0:12:30.10:0,30,409	0/0:22,0:21:36.08:0,36,456	0/0:20,0:20:42.08:0,42,544	0/0:22,0:22:48.62:0,49,639	1/1:5,13:11:10.13:333,10,0	1/1:2,7:9:9.03:117,9,0	./.
chr10	2469649	.	A	AAGAGAG	573.75	PASS	AB=1.000;AC=4;AF=0.071;AN=56;BaseQRankSum=2.625;DP=592;FS=25.120;HRun=0;HaplotypeScore=117.8460;InbreedingCoeff=0.3661;MQ=57.00;MQ0=30;MQRankSum=-2.269;QD=4.59;ReadPosRankSum=-3.612;VQSLOD=-0.3151;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:57.15:0,57,1147	0/0:5,0:5:11.85:0,12,259	0/0:76,0:23:56.22:0,56,994	0/1:98,0:27:36.76:37,0,451	0/0:19,0:19:47.97:0,48,987	0/0:23,0:22:51.05:0,51,1088	0/0:16,0:16:33.09:0,33,645	0/0:19,0:18:42.14:0,42,833	0/0:14,0:14:30.10:0,30,634	0/0:24,0:24:44.94:0,45,934	0/0:19,0:19:45.14:0,45,933	0/0:8,0:9:21.05:0,21,352	0/0:16,0:15:27.04:0,27,490	0/1:10,0:10:21.54:22,0,295	0/0:13,0:13:20.77:0,21,364	0/0:13,0:13:5.08:0,5,453	1/1:9,5:17:21.07:629,21,0	0/0:6,0:6:15.05:0,15,284	0/0:15,0:13:27.09:0,27,546	0/0:22,0:22:57.20:0,57,1228	0/0:23,0:23:50.45:0,50,1071	0/0:14,0:13:33.10:0,33,675	0/0:19,0:18:32.85:0,33,712	0/0:20,0:20:39.13:0,39,786	0/0:23,0:23:48.64:0,49,1035	0/0:20,0:13:35.60:0,36,630	0/0:9,0:9:12.03:0,12,206	0/0:5,0:1:3.01:0,3,43
chr10	2473176	.	GTATTTTTATTTT	G	4867.34	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=9.003;DP=513;FS=4.293;HRun=0;HaplotypeScore=180.3026;InbreedingCoeff=0.9025;MQ=65.91;MQ0=0;MQRankSum=-4.680;QD=44.65;ReadPosRankSum=0.149;VQSLOD=4.4271;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:81.27:0,81,2866	0/0:7,0:7:18.06:0,18,926	0/0:13,0:12:16.30:0,16,429	0/0:11,0:9:12.04:0,12,301	0/0:23,0:23:54.19:0,54,2807	0/0:23,0:23:66.23:0,66,3771	0/0:11,0:11:21.05:0,21,1086	1/1:22,15:37:45.12:1164,45,0	0/0:16,0:16:36.11:0,36,1715	0/0:27,0:27:57.20:0,57,3071	0/0:28,0:28:69.24:0,69,3675	0/0:14,0:14:24.08:0,24,1303	0/0:20,0:20:45.15:0,45,2224	0/0:8,0:8:15.05:0,15,885	0/0:8,0:8:15.05:0,15,706	0/0:13,0:13:30.10:0,30,1688	1/1:12,5:17:6.02:210,6,0	0/0:27,0:27:69.21:0,69,3705	0/0:23,0:23:42.14:0,42,2160	0/0:25,0:25:54.19:0,54,2874	0/0:14,0:14:24.08:0,24,1288	0/0:9,0:9:12.03:0,12,500	0/0:17,0:17:36.12:0,36,1793	0/0:10,0:10:18.06:0,18,1063	0/0:19,0:19:48.15:0,48,2671	1/1:4,25:29:75.26:2300,75,0	1/1:13,12:25:33.11:1088,33,0	1/1:0,1:1:3.01:105,3,0
chr10	2473178	.	AT	A	924.24	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=12.326;DP=498;FS=0.705;HRun=5;HaplotypeScore=75.5180;InbreedingCoeff=0.8314;MQ=63.23;MQ0=0;MQRankSum=-6.223;QD=23.11;ReadPosRankSum=1.856;VQSLOD=2.6442;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,35:39:90.25:1019,90,0	0/0:8,0:8:24.05:0,24,309	0/0:12,0:11:24.06:0,24,299	0/0:9,0:7:15.05:0,15,196	0/0:25,0:25:66.22:0,66,901	0/0:24,0:24:69.22:0,69,928	0/0:10,0:10:27.09:0,27,369	0/0:33,0:33:57.23:0,57,801	0/0:17,0:17:45.14:0,45,599	0/0:27,0:27:78.26:0,78,1066	0/0:29,0:29:84.28:0,84,1148	0/0:14,0:14:36.12:0,36,491	0/0:19,0:19:48.07:0,48,632	0/0:7,0:7:18.06:0,18,246	0/0:8,0:8:18.06:0,18,246	0/0:14,0:14:36.12:0,36,487	0/0:16,0:16:25.56:0,26,349	0/0:27,0:27:75.25:0,75,1026	0/0:22,0:22:66.22:0,66,901	0/0:23,0:23:57.19:0,57,779	0/0:13,0:13:36.11:0,36,475	0/0:6,0:6:15.05:0,15,205	0/0:17,0:17:45.15:0,45,614	0/0:9,0:9:21.07:0,21,287	0/0:20,0:20:54.16:0,54,718	0/0:27,0:27:10.17:0,10,270	0/0:22,0:22:29.02:0,29,445	1/1:1,0:1:0.89:2,1,0
chr10	2475153	.	T	TGG	5338.82	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=7.784;DP=702;FS=5.973;HRun=1;HaplotypeScore=93.3753;InbreedingCoeff=0.9999;MQ=76.20;MQ0=0;MQRankSum=-1.890;QD=54.48;ReadPosRankSum=0.321;VQSLOD=4.4026;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,108,1710	0/0:11,0:11:33.09:0,33,511	0/0:27,0:27:81.23:0,81,1218	0/0:20,0:20:49.47:0,49,762	0/0:32,0:32:96.30:0,96,1515	0/0:23,0:23:69.24:0,69,1125	0/0:15,0:15:42.13:0,42,653	1/1:2,20:22:54.17:1061,54,0	0/0:21,0:21:60.19:0,60,955	0/0:25,0:25:75.26:0,75,1222	0/0:44,0:44:99:0,132,2122	0/0:19,0:19:57.19:0,57,930	0/0:24,0:24:72.21:0,72,1122	0/0:30,0:30:90.29:0,90,1441	0/0:26,0:26:78.25:0,78,1248	0/0:13,0:13:39.13:0,39,634	0/0:21,0:21:60.20:0,60,978	0/0:25,0:25:69.21:0,69,1093	0/0:23,0:23:69.24:0,69,1125	0/0:30,0:30:90.27:0,90,1418	0/0:33,0:33:99:0,99,1586	0/0:35,0:35:99:0,105,1713	0/0:17,0:17:48.16:0,48,783	0/0:26,0:26:75.24:0,75,1198	0/0:27,0:27:81.25:0,81,1282	1/1:2,30:32:47.34:1758,47,0	1/1:0,30:30:87.30:1767,87,0	1/1:1,13:14:39.10:752,39,0
chr10	2475869	.	CA	C	1581.68	PASS	AB=0.805;AC=10;AF=0.179;AN=56;BaseQRankSum=9.202;DP=630;FS=4.701;HRun=11;HaplotypeScore=73.4541;InbreedingCoeff=0.7545;MQ=77.20;MQ0=0;MQRankSum=-0.401;QD=13.75;ReadPosRankSum=1.063;VQSLOD=3.9833;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,105,1014	0/0:10,0:10:27.06:0,27,279	0/0:16,0:18:19.22:0,19,233	0/1:10,0:11:33.46:33,0,42	0/0:31,0:31:65.87:0,66,646	0/0:18,1:20:32.26:0,32,500	0/0:22,1:24:38.32:0,38,581	0/1:9,16:25:16.04:291,0,16	0/0:25,0:25:60.12:0,60,619	0/0:20,0:24:59.62:0,60,564	0/0:19,0:24:50.84:0,51,488	0/0:19,0:19:51.08:0,51,525	0/0:17,1:19:29.15:0,29,438	0/0:32,1:35:68.48:0,68,878	0/0:27,0:27:60.10:0,60,607	0/0:21,0:22:62.97:0,63,641	1/1:0,15:15:41.95:345,42,0	0/0:17,0:17:42.06:0,42,423	0/0:22,0:27:52.73:0,53,631	0/0:25,0:25:55.28:0,55,522	0/0:18,1:23:23.13:0,23,407	0/0:20,1:21:26.50:0,26,461	0/0:24,0:24:51.58:0,52,532	0/0:15,0:17:41.93:0,42,422	0/0:23,0:25:53.94:0,54,541	1/1:5,21:27:67.94:547,68,0	1/1:6,21:27:21.90:387,22,0	1/1:2,8:10:17.96:148,18,0
chr10	2476097	.	TA	T	3603.81	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=10.440;DP=679;FS=2.435;HRun=1;HaplotypeScore=68.3936;InbreedingCoeff=0.9997;MQ=93.57;MQ0=0;MQRankSum=-1.389;QD=38.34;ReadPosRankSum=-0.388;VQSLOD=4.0097;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,110,1699	0/0:12,0:12:36.12:0,36,575	0/0:26,0:25:66.98:0,67,1060	0/0:33,0:33:90.25:0,90,1346	0/0:30,0:30:90.29:0,90,1412	0/0:17,0:17:51.17:0,51,813	0/0:19,0:19:57.19:0,57,911	1/1:0,32:32:96.30:1311,96,0	0/0:23,0:23:69.24:0,69,1103	0/0:17,0:17:51.16:0,51,775	0/0:31,0:31:93.21:0,93,1412	0/0:28,0:28:84.27:0,84,1315	0/0:16,0:16:48.15:0,48,743	0/0:25,0:25:75.26:0,75,1197	0/0:22,0:22:63.21:0,63,1006	0/0:26,0:26:78.25:0,78,1222	0/0:28,0:28:84.22:0,84,1266	0/0:15,0:15:45.13:0,45,689	0/0:19,0:19:57.18:0,57,888	0/0:25,0:25:75.24:0,75,1170	0/0:29,0:29:87.26:0,87,1341	0/0:27,0:27:81.28:0,81,1290	0/0:30,0:30:90.29:0,90,1412	0/0:24,0:24:69.16:0,69,1004	0/0:25,0:25:75.26:0,75,1198	1/1:0,34:34:99:1370,102,0	1/1:0,19:19:39.13:545,39,0	1/1:0,9:9:27.09:378,27,0
chr10	2478997	.	T	TCACCCA	1563.94	PASS	AC=6;AF=0.111;AN=54;BaseQRankSum=6.891;DP=662;FS=9.793;HRun=0;HaplotypeScore=154.0212;InbreedingCoeff=0.9912;MQ=80.56;MQ0=0;MQRankSum=-5.839;QD=78.20;ReadPosRankSum=0.372;VQSLOD=4.6524;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,123,2922	0/0:14,0:14:33.11:0,33,804	0/0:21,0:21:54.66:0,55,1256	0/0:26,0:26:72.22:0,72,1548	0/0:15,0:15:45.15:0,45,1126	0/0:14,0:14:42.14:0,42,1039	0/0:24,0:24:66.21:0,66,1631	1/1:0,5:7:21.03:541,21,0	0/0:28,0:28:84.27:0,84,2083	0/0:36,0:36:99:0,102,2568	0/0:31,0:31:87.10:0,87,2053	0/0:29,0:29:81.26:0,81,2024	0/0:27,0:27:81.28:0,81,2039	0/0:35,0:35:99:0,105,2628	0/0:37,0:37:99:0,111,2581	0/0:27,0:27:78.25:0,78,1945	0/0:39,0:38:99:0,114,2894	0/0:8,0:8:21.07:0,21,538	0/0:23,0:23:69.24:0,69,1732	0/0:23,0:23:69.21:0,69,1578	0/0:59,0:59:99:0,178,4405	0/0:16,0:16:48.15:0,48,1173	0/0:17,0:17:48.16:0,48,1220	0/0:30,0:30:90.26:0,90,2136	0/0:18,0:18:54.16:0,54,1281	1/1:0,6:6:18.06:599,18,0	1/1:0,6:7:18.06:562,18,0	./.
chr10	2479002	.	G	GATC	1451.74	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=8.052;DP=655;FS=31.012;HRun=0;HaplotypeScore=110.5823;InbreedingCoeff=0.9459;MQ=81.54;MQ0=0;MQRankSum=-8.178;QD=46.83;ReadPosRankSum=0.312;VQSLOD=2.6111;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,117,2122	0/0:12,0:12:36.12:0,36,671	0/0:16,0:16:45.15:0,45,788	0/0:27,0:27:74.23:0,74,1182	0/0:16,0:16:42.14:0,42,782	0/0:14,0:14:42.14:0,42,768	0/0:24,0:24:72.25:0,72,1331	1/1:8,5:13:39.11:713,39,0	0/0:27,0:27:81.26:0,81,1477	0/0:36,0:36:99:0,108,1963	0/0:29,0:29:77.77:0,78,1428	0/0:29,0:29:84.27:0,84,1534	0/0:28,0:28:84.24:0,84,1528	0/0:36,0:36:99:0,108,1948	0/0:39,0:39:99:0,117,2149	0/0:25,0:25:72.25:0,72,1343	0/0:37,0:36:99:0,108,2014	0/0:9,0:9:24.08:0,24,446	0/0:23,0:23:69.24:0,69,1276	0/0:20,0:20:60.21:0,60,1119	0/0:56,0:56:99:0,166,3056	0/0:15,0:15:45.15:0,45,809	0/0:18,0:18:51.17:0,51,924	0/0:29,0:29:87.30:0,87,1622	0/0:15,0:15:45.15:0,45,797	1/1:2,6:8:24.08:491,24,0	1/1:2,7:9:18.06:374,18,0	1/1:1,0:1:2.99:24,3,0
chr10	2479107	.	CTG	C	415.70	PASS	AB=0.974;AC=20;AF=0.417;AN=48;BaseQRankSum=3.858;DP=786;FS=0.000;HRun=0;HaplotypeScore=106.5503;InbreedingCoeff=-0.3593;MQ=59.59;MQ0=17;MQRankSum=0.510;QD=0.86;ReadPosRankSum=-0.332;VQSLOD=1.9156;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	0/1:16,1:17:19.16:19,0,164	0/0:45,0:8:3.01:0,3,44	./.	0/1:25,1:27:60.44:60,0,376	0/0:32,1:33:28.90:0,29,533	0/1:30,1:31:21.49:21,0,230	./.	0/1:34,0:34:0.08:0,0,653	0/0:34,0:34:5.46:0,5,442	0/1:14,0:14:22.69:23,0,156	0/1:38,1:39:42.34:42,0,621	0/1:26,1:27:0.69:1,0,430	0/0:24,0:24:25.65:0,26,563	0/1:39,1:40:99:129,0,540	0/1:40,3:43:25.52:26,0,723	./.	0/0:23,0:23:6.55:0,7,348	0/1:12,0:11:2.02:2,0,21	0/1:24,0:24:44.70:45,0,71	0/1:69,1:69:4.99:5,0,696	0/1:25,0:25:33.78:34,0,169	0/1:18,0:18:64.38:64,0,210	0/0:39,0:41:72.04:0,72,755	0/1:23,0:22:0.08:0,0,287	0/1:17,0:20:27.34:43,0,27	1/1:8,0:8:1.25:3,1,0	1/1:11,0:11:5.75:30,6,0
chr10	2479132	.	TGTGTGTGTGTGA	T	732.76	PASS	AB=0.878;AC=8;AF=0.143;AN=56;BaseQRankSum=5.650;DP=936;FS=3.275;HRun=0;HaplotypeScore=259.2974;InbreedingCoeff=0.3203;MQ=47.61;MQ0=43;MQRankSum=-7.810;QD=9.28;ReadPosRankSum=-6.973;VQSLOD=0.9549;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:19:6.46:0,6,50	0/1:23,0:19:15.17:15,0,1473	0/0:35,0:2:6.01:0,6,156	0/0:51,0:1:3.01:0,3,73	0/0:39,0:37:78.21:0,78,3040	0/0:33,0:31:69.50:0,69,3042	0/0:44,0:41:74.61:0,75,1974	0/1:17,0:12:5.79:81,0,6	0/0:42,0:42:70.41:0,70,4119	0/0:54,0:48:37.81:0,38,3855	0/0:25,0:22:39.09:0,39,1493	0/0:50,0:49:81.21:0,81,4157	0/0:32,0:31:27.32:0,27,2969	0/0:49,0:48:99:0,111,4558	0/0:45,0:44:99:0,113,4718	0/0:54,0:51:99:0,102,5264	1/1:4,0:4:0.97:2,1,0	0/0:28,0:27:62.52:0,63,2484	0/0:16,0:14:18.05:0,18,788	0/0:32,0:29:55.30:0,55,1528	0/0:70,0:64:99:0,117,5594	0/0:36,0:34:65.10:0,65,2450	0/0:21,0:18:39.13:0,39,1755	0/0:53,0:49:93.48:0,93,4506	0/0:28,0:26:53.99:0,54,2121	0/1:15,1:16:99:484,0,187	1/1:7,4:10:2.95:101,3,0	0/1:2,6:8:1.35:168,0,1
chr10	2479204	.	A	AGT	111.74	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.409;DP=1094;FS=4.877;HRun=0;HaplotypeScore=197.5922;InbreedingCoeff=0.6039;MQ=45.29;MQ0=46;MQRankSum=-6.596;QD=3.39;ReadPosRankSum=-2.510;VQSLOD=2.4125;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:23:8.54:0,9,52	0/0:19,0:16:35.97:0,36,435	0/0:26,0:3:0.93:0,1,37	0/0:42,0:5:12:0,12,137	0/0:50,0:45:62.79:0,63,903	0/0:37,0:36:57.58:0,58,738	0/0:53,1:49:46.50:0,47,1059	1/1:31,0:19:26.32:188,26,0	0/0:47,2:47:99:0,105,1397	0/0:66,1:60:95.87:0,96,1834	0/0:24,0:23:39.05:0,39,506	0/0:48,0:47:93.89:0,94,1343	0/0:59,1:58:92.73:0,93,1724	0/0:59,0:57:98.85:0,99,1349	0/0:62,0:62:99:0,123,1747	0/0:55,0:53:99:0,125,1766	0/0:5,0:5:2.99:0,3,24	0/0:23,0:23:13.85:0,14,506	0/0:32,0:17:42.13:0,42,609	0/0:43,2:42:47.86:0,48,712	0/0:86,0:79:99:0,183,2529	0/0:49,0:46:74.91:0,75,934	0/0:31,0:26:39.13:0,39,582	0/0:66,0:64:99:0,126,1746	0/0:37,1:34:47.86:0,48,659	0/0:4,0:3:6.01:0,6,26	0/0:2,0:2:3.01:0,3,45	1/1:2,0:2:3.01:31,3,0
chr10	2479208	.	TGAGAGAGA	T	57.16	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=6.583;DP=1078;FS=2.042;HRun=0;HaplotypeScore=268.6228;InbreedingCoeff=0.3732;MQ=45.35;MQ0=50;MQRankSum=-6.875;QD=0.95;ReadPosRankSum=-1.786;VQSLOD=1.7896;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:23:5.78:0,6,32	0/0:18,1:17:38.57:0,39,1246	0/1:25,0:3:0.93:1,0,93	0/0:42,0:7:5.35:0,5,259	0/0:47,1:43:59.45:0,59,2403	0/0:36,0:35:41.87:0,42,2043	0/0:50,0:48:75.27:0,75,2617	0/0:30,0:17:12.18:0,12,217	0/0:49,0:47:99:0,112,3910	0/0:63,1:57:38.69:0,39,4987	0/0:23,0:22:33.11:0,33,1366	0/0:44,0:43:67.58:0,68,3622	0/0:58,0:56:99:0,123,4672	0/0:59,0:58:98.18:0,98,3536	0/0:67,0:67:99:0,135,5076	0/0:52,0:51:99:0,124,4702	1/1:1,3:5:6.02:105,6,0	0/1:22,0:22:4.08:4,0,1374	0/0:36,0:16:42.06:0,42,1559	0/0:44,3:45:38.38:0,38,1859	0/0:82,0:73:99:0,175,6752	0/0:45,4:46:83.93:0,84,2810	0/0:26,0:24:39.11:0,39,1534	0/0:66,0:64:99:0,128,4899	0/0:41,0:36:47.82:0,48,1895	0/1:5,0:4:31.44:31,0,36	0/0:1,0:1:3.01:0,3,98	1/1:3,0:2:3:26,3,0
chr10	2479216	.	A	AGTGT	766.60	PASS	AB=0.979;AC=16;AF=0.286;AN=56;BaseQRankSum=9.842;DP=1115;FS=40.878;HRun=0;HaplotypeScore=216.3776;InbreedingCoeff=-0.1114;MQ=44.70;MQ0=58;MQRankSum=-4.180;QD=1.36;ReadPosRankSum=0.060;VQSLOD=1.4712;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:22:0.05:0,0,0	0/0:18,0:17:32.65:0,33,536	0/0:33,0:5:11.96:0,12,122	0/0:49,0:8:8.29:0,8,84	0/0:45,0:40:45.77:0,46,680	0/1:38,0:37:27.49:27,0,717	0/1:47,0:47:99:101,0,413	0/0:35,0:18:30.48:0,30,354	0/0:50,0:48:19.83:0,20,1264	0/1:63,0:56:99:168,0,1238	0/0:24,0:23:33.09:0,33,495	0/1:47,2:48:86.56:87,0,1081	0/1:60,1:59:88.04:88,0,1491	0/0:58,1:57:37.72:0,38,961	0/1:63,1:66:63.75:64,0,1566	0/1:53,0:52:51.81:52,0,1221	1/1:6,0:6:4.05:41,4,0	0/1:20,0:21:59.83:60,0,501	0/1:41,1:16:76.72:77,0,447	0/1:44,0:42:18.22:18,0,377	0/0:84,1:75:75.42:0,75,1841	0/0:53,0:51:78.14:0,78,1223	0/0:28,0:27:36.11:0,36,576	0/0:64,1:64:61.42:0,61,1716	0/1:41,0:38:99:123,0,288	0/0:3,0:3:4.26:0,4,43	0/0:2,0:2:3.01:0,3,38	1/1:2,0:1:2.80:13,3,0
chr10	2479230	.	T	TGTGTGA	854.07	PASS	AB=0.987;AC=16;AF=0.286;AN=56;BaseQRankSum=9.779;DP=1119;FS=41.964;HRun=0;HaplotypeScore=235.6462;InbreedingCoeff=-0.0997;MQ=44.52;MQ0=68;MQRankSum=-4.467;QD=1.58;ReadPosRankSum=-3.961;VQSLOD=0.8620;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:17:0:0,0,0	0/0:20,0:17:32.30:0,32,753	0/0:36,0:5:14.61:0,15,177	0/0:57,0:7:9.95:0,10,142	0/0:45,2:43:54.75:0,55,949	0/1:37,0:36:12.56:13,0,1120	0/1:46,0:44:87.98:88,0,694	0/0:40,0:20:35.92:0,36,407	0/0:46,0:46:37.53:0,38,1906	0/1:63,1:55:99:216,0,1723	0/0:24,2:25:45.08:0,45,747	0/1:45,1:48:86.12:86,0,1603	0/1:59,0:57:99:131,0,2177	0/0:48,0:47:46.60:0,47,1459	0/1:59,2:62:54.75:55,0,2212	0/1:52,1:51:58.67:59,0,1846	1/1:5,0:5:5.82:84,6,0	0/1:22,0:21:50.75:51,0,755	0/1:42,0:16:99:102,0,689	0/1:45,1:43:6.30:6,0,476	0/0:79,0:71:99:0,99,2683	0/0:50,0:48:86.37:0,86,1784	0/0:34,0:33:42.11:0,42,848	0/0:65,0:62:71.37:0,71,2432	0/1:44,0:38:99:102,0,458	0/1:9,0:7:0.59:1,0,43	0/0:2,0:2:3.01:0,3,38	1/1:1,0:1:2.80:13,3,0
chr10	2479244	.	A	AGAGAGT	423.71	PASS	AB=0.986;AC=11;AF=0.204;AN=54;BaseQRankSum=8.855;DP=996;FS=28.906;HRun=0;HaplotypeScore=213.0463;InbreedingCoeff=0.1066;MQ=44.73;MQ0=62;MQRankSum=-5.951;QD=1.53;ReadPosRankSum=-4.839;VQSLOD=-0.0869;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:15,0:12:0:0,0,0	0/0:19,0:15:34.93:0,35,705	0/0:30,0:5:1.13:0,1,89	0/0:54,0:7:6.96:0,7,146	0/0:40,0:37:42.09:0,42,860	0/0:34,0:32:50.20:0,50,1359	0/0:32,0:33:42.44:0,42,996	0/1:30,0:12:6.72:7,0,207	0/0:45,0:43:71.17:0,71,2022	0/1:55,0:46:77.51:78,0,1763	0/0:29,0:26:51.04:0,51,880	0/1:47,0:48:59.09:59,0,1844	0/1:53,2:52:99:269,0,2034	0/0:41,2:42:38.38:0,38,1572	0/0:50,0:52:74.52:0,75,2130	0/0:49,2:49:28.17:0,28,2136	1/1:4,0:4:1.85:5,2,0	0/1:23,0:22:48.20:48,0,715	0/1:43,0:16:51.47:51,0,775	0/0:32,0:32:12.50:0,13,422	0/0:66,0:55:99:0,103,2580	0/0:44,0:43:78.20:0,78,1786	0/0:32,0:33:48.11:0,48,944	0/0:59,0:56:99:0,107,2358	0/0:38,0:33:38.97:0,39,675	0/0:10,0:8:7.15:0,7,42	./.	1/1:1,0:1:3.01:37,3,0
chr10	2479330	.	AGTGT	A	54.70	PASS	AB=1.000;AC=5;AF=0.093;AN=54;BaseQRankSum=8.011;DP=1036;FS=5.714;HRun=0;HaplotypeScore=194.0427;InbreedingCoeff=0.4203;MQ=44.76;MQ0=56;MQRankSum=-6.059;QD=2.38;ReadPosRankSum=-2.488;VQSLOD=1.3292;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,2:7:0.89:2,1,0	0/0:15,0:13:12.24:0,12,550	0/0:23,0:4:11.71:0,12,222	0/0:39,0:9:18.34:0,18,367	0/0:36,3:35:27:0,27,646	0/0:33,0:33:72.68:0,73,1896	0/0:49,2:48:96.42:0,96,2165	0/0:24,2:7:6.02:0,6,98	0/0:45,0:43:85.51:0,86,2094	0/0:60,1:48:99:0,116,2424	0/0:32,2:31:50.33:0,50,1143	0/0:52,1:54:72.44:0,72,1876	0/0:56,0:52:72.27:0,72,2784	0/0:40,0:38:65.89:0,66,1970	0/0:47,0:48:92.91:0,93,2318	0/0:61,0:59:99:0,115,2739	0/0:7,0:7:5.63:0,6,39	0/0:16,0:16:6.50:0,6,873	0/0:44,0:27:17.22:0,17,1253	0/0:35,1:30:32.68:0,33,851	0/0:97,0:92:99:0,172,4192	0/0:37,0:36:54.65:0,55,1358	0/0:36,3:29:29.89:0,30,710	0/0:55,2:55:96.80:0,97,2348	0/0:39,1:38:51.59:0,52,1161	0/1:12,0:12:99:101,0,136	./.	1/1:1,0:1:3.01:45,3,0
chr10	2479334	.	TGAGA	T	66.52	PASS	AB=0.978;AC=7;AF=0.130;AN=54;BaseQRankSum=7.630;DP=1015;FS=5.649;HRun=0;HaplotypeScore=187.3324;InbreedingCoeff=0.2962;MQ=45.08;MQ0=51;MQRankSum=-6.584;QD=1.06;ReadPosRankSum=-2.505;VQSLOD=1.7931;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:12,1:8:0.89:2,1,0	0/1:13,1:13:27.59:28,0,446	0/1:21,0:4:2.62:3,0,185	0/0:38,0:9:15.52:0,16,331	0/0:37,0:34:23.91:0,24,537	0/0:31,0:31:69.15:0,69,1776	0/0:50,0:44:81.22:0,81,1868	0/0:27,0:9:12:0,12,146	0/0:44,0:43:77.51:0,78,1689	0/0:53,0:45:96.17:0,96,2113	0/0:33,0:30:51.14:0,51,1178	0/0:49,0:48:50.74:0,51,1846	0/0:64,0:60:99:0,123,3164	0/0:37,0:35:38.96:0,39,1839	0/0:47,0:47:90.04:0,90,2063	0/0:56,0:54:99:0,107,2557	0/0:7,0:7:5.72:0,6,111	0/0:14,0:14:36.59:0,37,864	0/0:41,0:23:28.02:0,28,1246	0/0:35,0:30:29.44:0,29,729	0/0:99,0:94:99:0,169,4135	0/0:40,1:36:63.22:0,63,1442	0/0:33,1:27:24.07:0,24,578	0/0:57,0:55:92.83:0,93,2043	0/0:46,0:42:36.02:0,36,840	0/1:14,0:14:95.78:96,0,191	./.	1/1:1,0:1:3.01:44,3,0
chr10	2479342	.	AGT	A	85.42	PASS	AB=0.935;AC=6;AF=0.111;AN=54;BaseQRankSum=9.372;DP=987;FS=10.987;HRun=0;HaplotypeScore=156.4261;InbreedingCoeff=0.2091;MQ=45.12;MQ0=49;MQRankSum=-4.915;QD=0.73;ReadPosRankSum=-3.941;VQSLOD=0.9067;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:13,0:9:0:0,0,0	0/0:14,1:13:16.23:0,16,290	0/0:20,0:4:9.02:0,9,139	0/0:31,0:7:15.01:0,15,227	0/0:36,1:31:10.60:0,11,326	0/0:32,0:32:80.86:0,81,1375	0/0:50,0:46:53.24:0,53,1415	0/0:25,0:12:18.02:0,18,216	0/0:41,3:42:41.58:0,42,1000	0/0:50,0:41:62.52:0,63,1322	0/0:29,0:27:35.90:0,36,783	0/1:39,6:44:15.75:16,0,1126	0/0:61,3:60:93.55:0,94,2159	0/0:39,1:38:44.06:0,44,1312	0/0:43,3:46:37.06:0,37,1253	0/0:51,3:53:75.38:0,75,1629	0/0:6,0:6:5.78:0,6,36	0/0:14,1:14:3.01:0,3,557	0/1:42,1:24:20.16:20,0,797	0/0:37,0:33:39.71:0,40,538	0/0:99,2:94:99:0,154,2668	0/0:39,1:36:40.04:0,40,944	0/0:36,0:25:21.07:0,21,369	0/0:51,1:49:77.71:0,78,1234	0/0:43,2:39:8.84:0,9,544	0/1:12,2:15:53.19:114,0,53	./.	1/1:0,1:1:3.01:45,3,0
chr10	2479358	.	TGAGAGAGAGA	T	112.19	PASS	AB=1.000;AC=6;AF=0.111;AN=54;BaseQRankSum=8.943;DP=969;FS=15.835;HRun=0;HaplotypeScore=245.9037;InbreedingCoeff=0.4156;MQ=44.94;MQ0=49;MQRankSum=-8.722;QD=2.67;ReadPosRankSum=-3.056;VQSLOD=0.4742;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:8:0.35:0,0,2	0/0:15,0:13:30.10:0,30,1018	0/0:14,0:2:6.01:0,6,119	0/0:22,0:6:10.21:0,10,230	0/0:37,2:32:30.09:0,30,1070	0/0:35,0:35:87.06:0,87,3180	0/0:59,0:51:99:0,102,3980	0/0:27,0:14:18.06:0,18,556	0/0:42,0:40:47.10:0,47,1967	0/0:53,1:43:17.13:0,17,3253	0/0:25,0:23:51.15:0,51,1976	0/0:43,0:43:50.86:0,51,2900	0/0:65,0:62:55.89:0,56,5419	0/0:37,0:37:76.65:0,77,4030	0/0:41,1:41:78.64:0,79,2753	0/0:44,0:44:88.33:0,88,3710	1/1:4,0:4:0.47:1,0,0	0/1:19,0:18:0.01:0,0,961	0/0:45,0:21:59.14:0,59,1534	0/0:35,0:33:35.42:0,35,857	0/0:100,0:91:99:0,193,7212	0/0:37,0:34:60.14:0,60,2148	0/0:35,0:27:24.08:0,24,888	0/0:46,0:43:66.22:0,66,2336	0/0:51,0:44:29.01:0,29,1244	0/1:16,0:16:99:173,0,369	./.	1/1:3,0:1:3:29,3,0
chr10	2479402	.	TGA	T	420.91	PASS	AB=0.976;AC=15;AF=0.300;AN=50;BaseQRankSum=8.534;DP=1233;FS=4.078;HRun=0;HaplotypeScore=214.0159;InbreedingCoeff=-0.2961;MQ=41.79;MQ0=89;MQRankSum=-2.798;QD=0.52;ReadPosRankSum=-5.587;VQSLOD=1.1942;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:10:4.83:0,5,53	0/1:18,0:16:3.33:3,0,249	1/1:23,0:1:2.94:18,3,0	0/0:53,0:3:2.84:0,3,14	0/0:48,1:45:1.20:0,1,357	0/1:42,0:39:6.77:7,0,596	0/1:85,0:71:41.07:41,0,715	./.	0/1:52,2:48:57.79:58,0,579	0/1:74,1:61:99:150,0,967	0/0:31,1:29:16.95:0,17,285	0/0:48,0:47:7.84:0,8,715	0/1:74,0:67:35.88:36,0,942	0/1:49,0:46:31.33:31,0,769	0/1:68,0:63:11.31:11,0,644	0/0:44,0:42:22.16:0,22,597	./.	0/0:21,0:21:25.24:0,25,427	0/1:47,1:16:26.61:27,0,263	0/1:42,1:40:1.94:2,0,305	0/1:135,5:126:99:161,0,1833	0/0:43,0:41:28.08:0,28,439	0/1:31,0:30:4.87:5,0,208	0/1:56,1:54:4.53:5,0,736	0/0:51,2:45:7.87:0,8,412	0/0:15,0:10:12.14:0,12,123	0/0:2,0:2:2.98:0,3,21	./.
chr10	2479466	.	AGTGT	A	3741.43	PASS	AB=0.897;AC=24;AF=0.522;AN=46;BaseQRankSum=5.338;DP=1450;FS=0.395;HRun=0;HaplotypeScore=366.2711;InbreedingCoeff=-0.7544;MQ=42.44;MQ0=72;MQRankSum=-3.906;QD=2.74;ReadPosRankSum=1.228;VQSLOD=1.1221;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	0/1:24,1:20:44.49:44,0,428	1/1:34,0:4:1.55:4,2,0	0/1:59,0:19:10.89:13,0,11	0/0:65,4:63:39.12:0,39,835	0/1:48,2:48:83.89:84,0,770	0/1:76,0:65:99:99,0,906	./.	0/1:62,7:63:99:302,0,1168	0/1:81,7:74:99:641,0,1532	0/1:33,3:32:28.09:28,0,256	0/1:56,15:72:99:314,0,1119	0/1:76,9:75:99:394,0,1404	0/1:49,12:57:99:186,0,830	0/1:78,10:79:99:227,0,642	0/1:42,12:52:99:374,0,652	./.	0/1:20,5:24:60.76:61,0,654	0/1:43,2:22:99:103,0,554	0/1:46,8:49:12.82:13,0,549	0/1:147,12:150:99:611,0,2972	0/1:56,9:58:21.78:22,0,874	0/1:43,7:44:5.64:6,0,595	0/1:80,10:89:99:118,0,2094	0/1:54,4:48:49.79:50,0,327	1/1:6,0:4:5.23:47,5,0	./.	./.
chr10	2479582	.	TGAGAGA	T	118.32	PASS	AB=0.952;AC=5;AF=0.096;AN=52;BaseQRankSum=3.580;DP=1004;FS=47.198;HRun=0;HaplotypeScore=229.7216;InbreedingCoeff=0.3938;MQ=42.54;MQ0=48;MQRankSum=-2.808;QD=2.37;ReadPosRankSum=-4.453;VQSLOD=0.0423;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:13,0:12:0.01:0,0,0	0/1:20,0:18:0.78:1,0,614	0/0:30,0:7:8.46:0,8,258	0/0:43,0:17:28.94:0,29,518	0/0:40,2:39:21:0,21,678	0/0:31,0:29:32.96:0,33,923	0/0:50,3:52:68.22:0,68,1981	0/0:28,1:8:4.86:0,5,164	0/0:47,1:48:56.59:0,57,1640	0/0:68,1:58:52.69:0,53,3641	0/0:27,0:25:24.08:0,24,783	0/0:38,1:35:17.06:0,17,799	0/0:50,1:52:99:0,121,3361	0/0:49,0:49:57.05:0,57,1491	0/0:55,1:55:27.48:0,27,1618	0/0:39,1:40:55.36:0,55,1758	./.	0/1:10,2:12:99:103,0,665	0/0:35,0:17:13.49:0,13,1243	0/0:28,0:24:25.28:0,25,768	0/0:80,1:74:80.51:0,81,2398	0/0:44,1:43:32.52:0,33,885	0/0:41,0:33:21.53:0,22,679	0/0:48,1:48:48.42:0,48,1389	0/0:26,3:27:29.35:0,29,980	0/0:8,0:8:5.88:0,6,143	./.	1/1:4,1:3:6.02:108,6,0
chr10	2479620	.	TGC	T	1233.08	PASS	AB=0.938;AC=44;AF=0.880;AN=50;BaseQRankSum=-1.111;DP=600;FS=6.187;HRun=0;HaplotypeScore=148.6557;InbreedingCoeff=0.1138;MQ=49.24;MQ0=16;MQRankSum=-0.402;QD=2.13;ReadPosRankSum=1.205;VQSLOD=1.9861;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	1/1:8,0:7:3.88:27,4,0	0/1:28,0:9:0.82:1,0,94	0/1:43,0:20:24.45:24,0,68	1/1:22,2:21:3:25,3,0	1/1:21,3:22:12.82:108,13,0	1/1:17,5:19:10.78:74,11,0	0/0:8,1:2:2.80:0,3,13	1/1:26,3:27:7.95:64,8,0	1/1:33,2:32:10.05:263,10,0	1/1:18,0:16:7.24:55,7,0	1/1:27,2:27:3.74:13,4,0	0/1:26,4:27:21.12:91,0,21	1/1:30,3:30:5.08:38,5,0	1/1:42,4:41:0.89:3,1,0	1/1:28,3:27:9.99:93,10,0	./.	1/1:6,1:7:7.26:68,7,0	0/1:14,2:10:7.89:123,0,8	1/1:15,2:15:11.60:82,12,0	1/1:29,6:30:0.47:1,0,0	1/1:24,0:20:0.47:1,0,0	1/1:25,0:19:2.99:25,3,0	1/1:23,2:24:6.02:51,6,0	1/1:17,0:15:8.22:58,8,0	1/1:5,0:4:3.01:30,3,0	./.	1/1:3,1:3:3:29,3,0
chr10	2479638	.	AGAGTGT	A	942.54	PASS	AB=0.922;AC=21;AF=0.438;AN=48;BaseQRankSum=-2.658;DP=594;FS=27.116;HRun=0;HaplotypeScore=144.9584;InbreedingCoeff=-0.1368;MQ=39.83;MQ0=23;MQRankSum=-0.289;QD=2.51;ReadPosRankSum=-1.570;VQSLOD=0.5971;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/1:7,1:7:0.08:0,0,0	0/1:28,0:6:23.90:24,0,41	0/0:53,0:22:17.44:0,17,152	0/1:12,3:14:0:0,0,0	1/1:20,2:19:12.25:149,12,0	0/0:24,1:19:5.86:0,6,101	./.	0/1:31,3:33:84.66:85,0,146	0/1:26,3:25:99:271,0,369	1/1:14,2:14:3:26,3,0	0/0:28,2:29:5.29:0,5,141	0/1:26,1:25:59.25:59,0,200	0/1:30,2:31:40.16:40,0,70	0/0:32,5:35:1.16:0,1,19	0/1:25,1:24:74.53:75,0,95	./.	0/1:5,1:6:2.35:2,0,25	0/1:27,0:11:99:142,0,108	0/1:17,0:15:18.11:81,0,18	1/1:37,6:40:0.47:1,0,0	0/1:15,4:15:0:0,0,0	0/0:16,4:17:0:0,0,0	0/0:22,1:23:2.61:0,3,86	0/1:16,0:14:41.70:42,0,83	1/1:4,1:4:3.01:72,3,0	./.	0/0:5,0:4:5.38:0,5,66
chr10	2479640	.	AGTGTGT	A	571.79	PASS	AB=0.967;AC=18;AF=0.409;AN=44;BaseQRankSum=-1.223;DP=557;FS=19.999;HRun=0;HaplotypeScore=137.6479;InbreedingCoeff=-0.1108;MQ=41.58;MQ0=23;MQRankSum=0.754;QD=1.74;ReadPosRankSum=-1.095;VQSLOD=1.1158;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/1:7,0:6:0:0,0,0	0/1:22,1:6:42.52:43,0,51	0/0:52,0:22:22.94:0,23,176	1/1:16,0:15:0.47:1,0,0	1/1:20,0:17:7.34:80,7,0	0/0:20,0:15:3.53:0,4,106	./.	0/1:30,3:30:56.92:57,0,167	0/1:28,0:24:99:162,0,422	./.	0/0:26,0:25:11.52:0,12,158	0/1:30,0:27:44.55:45,0,238	0/1:30,2:31:22.46:22,0,70	0/0:36,0:32:1.18:0,1,24	0/1:27,0:23:75.57:76,0,103	./.	0/0:6,0:6:5.81:0,6,65	0/1:28,1:12:99:101,0,129	0/1:16,0:15:20.17:52,0,20	1/1:42,0:40:0.47:2,0,0	0/1:16,0:13:0:0,0,0	./.	0/0:22,0:22:2.61:0,3,102	0/0:11,0:9:3.01:0,3,90	1/1:4,0:4:3.01:52,3,0	./.	0/0:5,0:4:5.97:0,6,97
chr10	2479642	.	TGTGTGAGA	T	317.52	PASS	AB=0.994;AC=17;AF=0.370;AN=46;BaseQRankSum=-0.996;DP=552;FS=16.013;HRun=0;HaplotypeScore=140.4239;InbreedingCoeff=-0.0636;MQ=41.53;MQ0=24;MQRankSum=-0.575;QD=1.07;ReadPosRankSum=-2.228;VQSLOD=1.4579;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/1:6,0:5:0.23:0,0,0	0/1:24,0:6:27.85:28,0,57	0/0:53,0:22:16.26:0,16,159	0/1:18,0:16:0:0,0,0	1/1:20,0:17:7.19:67,7,0	0/0:20,0:15:3.01:0,3,126	./.	0/1:33,0:31:9.73:10,0,284	0/1:28,0:24:99:123,0,664	./.	0/0:26,0:25:12.18:0,12,287	0/1:30,0:27:52.72:53,0,366	0/0:32,0:30:9.87:0,10,99	0/0:37,0:33:1.16:0,1,21	0/1:25,1:22:45.06:45,0,143	./.	0/1:5,0:5:2.40:2,0,28	0/1:29,0:11:47.29:47,0,133	0/1:17,0:15:20.79:28,0,21	1/1:34,3:39:0.47:1,0,0	0/1:15,0:12:0:0,0,0	0/0:16,0:12:0:0,0,0	0/0:21,1:22:2.48:0,2,90	0/0:10,0:8:3.01:0,3,133	1/1:4,0:4:3.01:31,3,0	./.	0/0:5,0:4:3.01:0,3,72
chr10	2479646	.	TGAGA	T	36.76	PASS	AB=0.979;AC=13;AF=0.310;AN=42;BaseQRankSum=2.739;DP=563;FS=0.000;HRun=0;HaplotypeScore=130.1520;InbreedingCoeff=0.2055;MQ=39.83;MQ0=26;MQRankSum=-1.178;QD=0.18;ReadPosRankSum=-3.548;VQSLOD=1.1857;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/1:6,0:5:0.01:0,0,0	0/0:26,0:6:3.06:0,3,39	0/0:53,0:22:12.77:0,13,82	./.	0/1:19,1:17:30.57:41,0,31	0/0:18,0:13:3.01:0,3,57	./.	0/0:38,0:34:10.31:0,10,299	0/0:26,0:22:0.56:0,1,464	./.	0/0:26,0:25:14.15:0,14,259	0/0:30,0:27:18.63:0,19,339	0/0:30,0:28:4.26:0,4,43	1/1:40,0:36:0.87:3,1,0	0/1:28,0:24:10.47:10,0,84	./.	1/1:4,1:5:2.87:51,3,0	0/1:30,0:10:2.37:2,0,118	1/1:17,0:15:4.25:30,4,0	0/1:45,3:47:0.03:0,0,0	./.	0/0:16,0:12:0:0,0,0	0/0:20,2:20:2.68:0,3,53	0/0:12,0:10:3.01:0,3,75	0/0:4,0:4:1.55:0,2,4	./.	1/1:4,0:3:0.47:1,0,0
chr10	2479650	.	A	AGAGT	517.87	PASS	AB=0.940;AC=14;AF=0.318;AN=44;BaseQRankSum=0.667;DP=579;FS=20.890;HRun=0;HaplotypeScore=132.8693;InbreedingCoeff=-0.0582;MQ=40.76;MQ0=29;MQRankSum=-0.839;QD=1.74;ReadPosRankSum=-0.050;VQSLOD=1.2416;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	1/1:8,0:7:1.46:4,1,0	0/0:25,0:5:2.03:0,2,64	0/1:59,0:25:0.40:0,0,69	0/0:18,0:16:0:0,0,0	1/1:18,3:18:8.37:69,8,0	0/0:16,1:12:2.66:0,3,52	./.	0/1:39,1:37:36.81:37,0,88	0/1:25,1:22:99:142,0,229	./.	0/0:25,2:26:11.71:0,12,87	0/1:24,5:26:78.04:187,0,78	0/1:28,2:28:7.01:7,0,29	0/0:34,7:37:0:0,0,0	0/1:26,3:25:12.33:12,0,65	./.	0/0:4,0:4:2.98:0,3,29	0/1:30,2:10:47.56:147,0,48	0/1:17,0:15:5.70:6,0,6	0/0:49,0:46:0:0,0,1	0/0:15,0:12:0:0,0,0	./.	0/0:21,0:19:2.55:0,3,37	0/0:12,0:10:3.01:0,3,53	0/0:4,0:4:2.98:0,3,21	./.	1/1:3,0:3:2.96:19,3,0
chr10	2479652	.	A	AGAGT	451.63	PASS	AB=0.981;AC=15;AF=0.357;AN=42;BaseQRankSum=1.373;DP=594;FS=27.079;HRun=0;HaplotypeScore=136.2468;InbreedingCoeff=-0.1073;MQ=41.77;MQ0=28;MQRankSum=-2.876;QD=1.41;ReadPosRankSum=0.641;VQSLOD=0.5199;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	1/1:8,0:7:1.82:5,2,0	0/1:28,0:5:2.62:3,0,39	0/0:57,0:25:1.43:0,1,59	./.	1/1:21,2:20:7.87:64,8,0	0/0:15,2:12:2.91:0,3,53	./.	0/1:43,0:38:55.76:75,0,56	0/1:28,0:23:99:113,0,181	./.	0/1:26,1:26:36.93:45,0,37	0/1:30,0:27:44.24:112,0,44	0/1:29,0:28:5.87:6,0,30	0/0:41,0:38:0:0,0,0	0/0:29,0:25:3.17:0,3,88	./.	0/0:4,0:4:2.87:0,3,16	0/1:31,0:11:18.42:103,0,18	0/1:16,0:15:3.62:20,0,4	0/1:50,0:47:0.26:0,0,1	0/0:15,0:12:0:0,0,0	./.	0/0:21,1:20:2.55:0,3,36	0/0:12,0:10:3.01:0,3,53	0/0:2,0:2:2.68:0,3,11	./.	1/1:4,0:3:2.96:19,3,0
chr10	2479654	.	A	AGT	324.11	PASS	AB=0.972;AC=12;AF=0.273;AN=44;BaseQRankSum=-0.004;DP=599;FS=31.847;HRun=0;HaplotypeScore=135.1126;InbreedingCoeff=-0.1264;MQ=41.60;MQ0=30;MQRankSum=-2.090;QD=0.98;ReadPosRankSum=3.677;VQSLOD=0.6287;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	1/1:7,0:7:1.55:4,2,0	0/0:32,0:7:9.42:0,9,113	0/0:56,0:24:11.01:0,11,114	0/0:19,0:18:0:0,0,0	0/1:22,0:19:8.56:23,0,9	0/0:15,1:12:2.74:0,3,38	./.	0/1:43,2:40:57.72:92,0,58	0/1:27,0:22:99:118,0,121	./.	0/1:27,2:28:17.81:56,0,18	0/1:30,0:27:49.14:55,0,49	0/1:31,0:29:6:6,0,26	0/1:39,1:36:0:0,0,0	0/0:29,1:26:18.37:0,18,126	./.	0/0:4,0:4:2.90:0,3,18	0/1:33,0:11:40.47:54,0,40	0/1:16,1:15:6.89:26,0,7	0/1:46,0:47:0.05:0,0,0	0/0:15,0:12:0:0,0,0	./.	0/0:22,0:20:3.01:0,3,32	0/0:12,1:10:3.01:0,3,37	0/0:2,0:2:2.68:0,3,11	./.	0/0:4,0:3:2.92:0,3,17
chr10	2479662	.	AGCGT	A	221.56	PASS	AB=0.958;AC=16;AF=0.400;AN=40;BaseQRankSum=0.904;DP=557;FS=10.020;HRun=0;HaplotypeScore=140.0246;InbreedingCoeff=0.1427;MQ=41.34;MQ0=19;MQRankSum=-0.476;QD=0.81;ReadPosRankSum=-4.171;VQSLOD=0.6113;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	1/1:5,0:5:8.04:46,8,0	0/0:31,0:6:2.18:0,2,60	0/0:54,0:20:5.65:0,6,100	./.	1/1:21,0:18:4.56:36,5,0	0/0:15,0:12:2.64:0,3,51	./.	0/1:39,1:35:9.97:10,0,230	0/1:23,1:22:73.18:73,0,431	./.	0/0:29,0:28:6.55:0,7,207	0/1:29,2:28:48.24:48,0,288	0/0:27,0:26:3:0,3,38	1/1:37,1:35:2.12:5,2,0	0/1:28,1:25:41.37:41,0,90	./.	1/1:4,0:4:2.87:30,3,0	0/0:26,0:10:19.32:0,19,186	1/1:20,0:17:5.82:51,6,0	0/1:46,0:43:0:1,0,0	0/1:12,1:10:0:0,0,0	./.	0/0:27,2:27:2.45:0,2,19	0/0:12,2:11:2.85:0,3,57	./.	./.	0/0:3,1:3:2.96:0,3,19
chr10	2479676	.	A	AGTGT	1186.41	PASS	AB=0.929;AC=16;AF=0.381;AN=42;BaseQRankSum=0.744;DP=640;FS=0.928;HRun=0;HaplotypeScore=149.3095;InbreedingCoeff=-0.0468;MQ=40.56;MQ0=28;MQRankSum=-1.380;QD=3.41;ReadPosRankSum=-0.276;VQSLOD=1.9502;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:8,0:8:1.12:0,1,23	0/0:36,0:7:1.07:0,1,28	0/0:54,0:19:22.33:0,22,181	./.	1/1:16,1:16:6.59:56,7,0	0/0:29,1:22:2.69:0,3,33	0/0:15,0:5:2.92:0,3,17	0/1:35,5:33:58.89:209,0,59	0/1:30,1:27:99:296,0,104	./.	1/1:24,3:25:8.41:72,8,0	0/1:33,2:31:9.58:314,0,10	0/1:31,3:31:15.42:15,0,36	0/1:46,2:44:20.57:33,0,21	0/1:32,6:33:20.73:134,0,21	./.	1/1:4,0:3:6.38:40,6,0	0/1:28,0:9:38:91,0,38	0/0:18,0:17:0:0,0,1	0/0:48,5:50:0.47:0,0,1	./.	0/0:14,1:11:0:0,0,0	0/1:33,3:33:0.26:0,0,0	0/0:20,0:17:3.01:0,3,35	./.	./.	1/1:5,0:3:3.01:45,3,0
chr10	2479700	.	AGAGTGCGTGT	A	362.18	PASS	AB=0.945;AC=19;AF=0.380;AN=50;BaseQRankSum=0.624;DP=734;FS=3.797;HRun=0;HaplotypeScore=172.2162;InbreedingCoeff=0.0092;MQ=33.95;MQ0=39;MQRankSum=0.003;QD=0.91;ReadPosRankSum=-3.354;VQSLOD=2.2101;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:7,1:8:3.01:0,3,36	0/1:13,0:13:18.59:19,0,131	0/0:52,0:6:2.16:0,2,39	0/0:69,0:12:17.65:0,18,331	1/1:17,1:18:0.47:1,0,0	0/0:15,0:15:2.02:0,2,50	0/0:53,2:39:14.84:0,15,275	0/0:12,0:1:2.99:0,3,24	0/1:39,1:34:79.48:79,0,369	0/0:34,0:31:8.36:0,8,1067	./.	0/1:31,1:29:14.09:14,0,134	0/1:32,1:27:84.72:85,0,326	0/0:35,3:33:1.97:0,2,86	1/1:46,5:49:3.14:45,3,0	0/1:37,6:39:99:141,0,308	./.	0/0:4,0:3:3.01:0,3,62	0/1:20,1:10:84.90:85,0,282	1/1:19,1:18:1.11:2,1,0	1/1:50,2:46:1.27:2,1,0	1/1:13,1:13:1.55:4,2,0	0/1:15,1:13:0:0,0,0	1/1:39,1:35:0.43:1,0,0	0/0:23,1:23:5.61:0,6,184	./.	0/0:5,0:5:0.20:0,0,1	0/0:2,0:1:3.01:0,3,38
chr10	2479702	.	AGTGC	A	896.34	PASS	AB=0.935;AC=32;AF=0.667;AN=48;BaseQRankSum=0.483;DP=722;FS=5.080;HRun=0;HaplotypeScore=156.3775;InbreedingCoeff=0.0389;MQ=32.78;MQ0=37;MQRankSum=0.360;QD=1.47;ReadPosRankSum=-1.875;VQSLOD=2.2991;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:6,1:7:2.96:19,3,0	1/1:13,0:13:8.68:68,9,0	0/0:51,0:6:2.90:0,3,16	0/1:66,0:11:1.30:1,0,115	0/1:18,0:18:0:0,0,0	0/1:14,0:15:0.24:0,0,0	1/1:51,4:40:5.38:25,5,0	1/1:10,1:1:2.88:15,3,0	0/1:31,3:34:60.38:67,0,60	0/1:31,1:31:54.56:285,0,55	./.	0/1:29,3:28:10.96:47,0,11	0/1:31,0:26:44.60:178,0,45	0/1:33,3:33:8:8,0,9	1/1:43,5:50:3.97:26,4,0	1/1:37,1:38:25.97:217,26,0	./.	1/1:4,0:3:1.82:5,2,0	0/1:21,0:10:39.25:39,0,75	1/1:19,0:17:0.55:3,1,0	0/1:44,7:45:0.01:1,0,0	0/1:12,0:13:0:0,0,0	./.	1/1:34,4:35:0.47:1,0,0	0/0:21,1:23:5.50:0,6,40	./.	0/1:5,0:5:0:0,0,0	1/1:2,0:1:2.22:7,2,0
chr10	2479704	.	TGC	T	1137.19	PASS	AB=0.856;AC=37;AF=0.740;AN=50;BaseQRankSum=-0.325;DP=708;FS=5.954;HRun=0;HaplotypeScore=150.4194;InbreedingCoeff=0.3149;MQ=31.56;MQ0=32;MQRankSum=0.656;QD=2.03;ReadPosRankSum=-0.496;VQSLOD=1.7487;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:6,0:6:3.01:38,3,0	1/1:8,6:14:11.87:84,12,0	0/0:47,0:4:2.98:0,3,21	0/0:63,1:10:0.55:0,1,65	0/1:9,7:16:0:0,0,0	1/1:12,3:15:2.49:16,2,0	1/1:44,9:38:12.11:89,12,0	1/1:11,0:1:3.01:35,3,0	1/1:35,4:34:13.03:62,13,0	1/1:24,10:31:44.20:461,44,0	./.	1/1:30,2:28:2.58:33,3,0	1/1:25,6:26:28.95:180,29,0	1/1:31,7:33:6.39:27,6,0	1/1:44,8:49:1.39:14,1,0	1/1:39,3:37:18.29:139,18,0	./.	0/1:4,0:3:0:0,0,0	0/1:17,1:10:15.95:44,0,16	1/1:12,7:17:0.75:2,1,0	0/1:46,4:44:0:0,0,0	0/1:8,6:13:0:0,0,0	0/0:16,3:15:0:0,0,0	0/1:35,5:35:0:1,0,0	1/1:24,2:25:1.55:4,2,0	./.	0/1:4,0:5:0:0,0,0	1/1:1,0:1:2.50:9,2,0
chr10	2479712	.	TGAGA	T	71.20	PASS	AB=0.992;AC=13;AF=0.310;AN=42;BaseQRankSum=2.166;DP=766;FS=0.000;HRun=0;HaplotypeScore=166.6213;InbreedingCoeff=0.0291;MQ=28.04;MQ0=49;MQRankSum=1.495;QD=0.19;ReadPosRankSum=-0.806;VQSLOD=2.6639;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	0/0:16,0:16:2.94:0,3,87	./.	./.	0/1:20,0:19:0:0,0,0	0/0:17,1:18:0.29:0,0,0	0/1:57,0:39:23.71:24,0,96	./.	0/0:44,0:37:8:0,8,63	0/1:34,0:30:30.36:30,0,211	./.	0/0:37,1:33:8.21:0,8,83	0/1:31,1:27:29.68:30,0,43	1/1:41,0:35:0.09:1,0,0	1/1:54,0:50:2.89:13,3,0	0/1:49,0:43:45.18:45,0,86	./.	0/0:6,0:5:9:0,9,103	0/1:20,0:11:26.36:26,0,74	0/0:19,1:17:0:0,0,1	0/0:52,0:45:0:0,0,0	0/1:18,0:16:0.11:0,0,0	0/0:19,0:16:0:0,0,0	1/1:41,0:34:0.47:1,0,0	0/0:28,1:28:3.01:0,3,60	./.	0/0:6,0:6:1.82:0,2,6	0/0:5,0:2:3.01:0,3,54
chr10	2479746	.	AGAGT	A	289.64	PASS	AB=0.982;AC=21;AF=0.420;AN=50;BaseQRankSum=2.083;DP=1068;FS=28.409;HRun=0;HaplotypeScore=241.9555;InbreedingCoeff=-0.2432;MQ=23.97;MQ0=114;MQRankSum=-0.373;QD=0.36;ReadPosRankSum=-0.349;VQSLOD=1.4343;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:17:2.98:0,3,22	0/1:22,1:19:32.83:33,0,53	./.	./.	0/1:34,0:31:0.14:0,0,0	0/1:31,1:28:6.86:7,0,19	0/1:86,2:62:26.33:26,0,43	0/0:31,0:4:8.86:0,9,57	0/1:47,2:41:12.23:12,0,83	0/1:54,2:40:74.56:75,0,293	./.	0/1:51,0:42:4.35:4,0,106	0/1:50,1:39:60.18:60,0,143	1/1:59,1:49:3.45:19,3,0	0/1:76,2:64:5.61:6,0,18	0/1:60,4:53:99:118,0,100	1/1:7,0:4:0.70:9,1,0	0/0:12,0:9:5:0,5,106	0/1:34,0:13:10.16:10,0,123	0/0:39,0:30:0.77:0,1,65	0/0:68,0:51:5.90:0,6,42	0/1:40,0:36:0.11:0,0,0	0/0:38,0:28:4.81:0,5,18	1/1:51,0:45:4.19:16,4,0	0/1:54,0:43:15.82:16,0,67	0/1:19,0:8:3.69:4,0,43	0/1:9,0:9:1.64:2,0,40	0/0:9,0:4:5.93:0,6,61
chr10	2479778	.	A	AGTGTGT	1094.62	PASS	AB=0.991;AC=14;AF=0.280;AN=50;BaseQRankSum=2.924;DP=1230;FS=0.000;HRun=0;HaplotypeScore=255.9774;InbreedingCoeff=-0.2701;MQ=24.27;MQ0=143;MQRankSum=-1.599;QD=1.76;ReadPosRankSum=-2.425;VQSLOD=1.4581;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:16:6.02:0,6,147	0/1:23,0:19:64.82:65,0,203	./.	./.	0/0:55,0:44:2.99:0,3,25	0/1:33,0:23:15.57:16,0,116	0/1:74,3:50:38.14:71,0,38	0/1:52,0:14:54.57:55,0,99	0/0:51,1:44:30.37:0,30,551	0/1:70,0:49:99:359,0,835	./.	0/1:55,0:47:10.82:11,0,395	0/1:65,0:46:99:150,0,731	0/1:62,0:49:27.12:27,0,72	0/0:79,1:58:4.64:0,5,65	0/1:57,0:46:99:174,0,237	1/1:15,0:11:7.58:77,8,0	0/0:13,0:12:24.05:0,24,417	0/1:30,0:16:99:126,0,144	0/1:58,0:44:96.30:96,0,260	0/0:59,2:37:5.36:0,5,146	0/0:57,1:51:7.83:0,8,97	0/0:49,0:35:9.03:0,9,185	0/0:46,1:35:12.15:0,12,201	0/0:66,0:51:13.76:0,14,297	0/1:20,0:12:12.06:12,0,365	0/0:11,0:10:20:0,20,236	0/0:11,0:7:1.82:0,2,5
chr10	2479780	.	A	AGTGT	893.03	PASS	AB=0.979;AC=16;AF=0.320;AN=50;BaseQRankSum=3.547;DP=1246;FS=2.016;HRun=0;HaplotypeScore=246.1153;InbreedingCoeff=-0.2427;MQ=24.35;MQ0=146;MQRankSum=-4.495;QD=1.41;ReadPosRankSum=-1.777;VQSLOD=2.5594;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:16:6.02:0,6,119	0/1:23,1:19:29.26:29,0,170	./.	./.	0/0:50,5:43:6:0,6,74	0/1:32,0:21:21.28:21,0,88	0/1:76,0:47:55.92:78,0,56	0/1:53,0:16:0.06:0,0,110	0/0:52,0:44:29.87:0,30,418	0/1:75,0:52:99:275,0,866	./.	0/0:58,0:48:0.42:0,0,276	0/1:67,0:47:99:134,0,505	0/1:63,0:49:15.79:16,0,55	0/0:74,0:55:4.02:0,4,48	0/1:54,1:43:99:129,0,174	1/1:8,5:11:6.84:110,7,0	0/0:13,0:12:24.01:0,24,336	0/1:31,0:15:79.49:86,0,79	0/1:59,1:46:99:122,0,143	0/0:60,0:38:6.16:0,6,119	0/1:55,5:53:6.72:7,0,26	0/0:46,3:36:8.70:0,9,104	0/0:48,0:36:11.19:0,11,160	0/0:62,6:53:0.31:0,0,198	0/0:19,0:12:10.37:0,10,256	0/1:10,0:10:11.82:12,0,168	1/1:12,0:8:2.76:13,3,0
chr10	2479782	.	A	AGTGTGT	768.93	PASS	AB=0.995;AC=13;AF=0.260;AN=50;BaseQRankSum=3.640;DP=1282;FS=10.545;HRun=0;HaplotypeScore=245.3416;InbreedingCoeff=-0.2193;MQ=24.34;MQ0=152;MQRankSum=-2.622;QD=1.31;ReadPosRankSum=-2.800;VQSLOD=0.8499;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:16:6.02:0,6,144	0/1:24,0:19:14.32:14,0,210	./.	./.	0/0:58,1:46:9.01:0,9,144	0/1:33,1:23:15.53:16,0,116	0/1:72,0:46:80.57:81,0,103	0/1:55,0:18:2.98:3,0,178	0/0:55,0:45:24.72:0,25,559	0/1:80,0:58:99:251,0,1207	./.	0/0:58,0:48:10.13:0,10,397	0/1:67,2:49:34.39:34,0,818	0/0:61,1:49:4.21:0,4,67	0/0:74,1:55:5.65:0,6,72	0/1:56,0:44:95.42:95,0,254	1/1:16,0:11:5.25:78,5,0	0/0:13,0:12:24.08:0,24,461	0/1:38,0:16:99:138,0,127	0/1:60,0:46:99:167,0,169	0/0:60,0:37:5.36:0,5,142	0/1:61,0:53:13.74:14,0,17	0/0:52,0:37:8.99:0,9,138	0/0:49,0:37:15.21:0,15,246	0/0:70,1:56:12.92:0,13,199	0/1:20,0:13:18.02:18,0,349	0/0:10,0:9:19.58:0,20,232	0/0:10,0:7:2.04:0,2,6
chr10	2479806	.	T	TGAGA	1421.19	PASS	AB=0.997;AC=23;AF=0.411;AN=56;BaseQRankSum=1.304;DP=1503;FS=13.229;HRun=0;HaplotypeScore=256.0759;InbreedingCoeff=-0.0596;MQ=25.17;MQ0=162;MQRankSum=-2.827;QD=1.52;ReadPosRankSum=0.932;VQSLOD=1.0069;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:17:6.02:83,6,0	0/1:32,0:25:23.03:23,0,87	0/0:41,0:3:5.98:0,6,96	0/0:66,0:5:9.01:0,9,94	0/0:75,0:58:10.05:0,10,337	0/1:36,0:26:19.57:20,0,120	0/1:66,0:39:37.52:38,0,98	0/1:62,0:24:25.60:26,0,225	0/1:64,0:53:99:108,0,274	0/1:97,1:76:99:199,0,1606	0/0:41,1:31:9.03:0,9,153	0/1:56,0:49:4.86:88,0,5	0/1:68,1:52:99:229,0,359	0/1:71,0:56:19.25:38,0,19	1/1:74,0:52:2.91:65,3,0	0/1:66,0:53:94.73:95,0,194	0/0:13,0:11:10.21:0,10,84	0/1:12,0:10:97.15:97,0,124	0/0:77,0:22:24.32:0,24,403	0/1:72,0:54:99:116,0,273	0/0:68,0:41:15.38:0,15,268	0/0:63,1:56:5.55:0,6,110	0/0:58,0:44:21.07:0,21,372	0/0:60,0:52:27.80:0,28,460	0/1:85,0:68:16.56:17,0,142	1/1:17,0:12:12.41:117,12,0	1/1:17,0:16:7.47:79,7,0	1/1:10,2:10:9.64:158,10,0
chr10	2479828	.	TGA	T	414.80	PASS	AB=0.958;AC=15;AF=0.268;AN=56;BaseQRankSum=1.867;DP=1472;FS=19.431;HRun=0;HaplotypeScore=253.4875;InbreedingCoeff=-0.2723;MQ=26.93;MQ0=124;MQRankSum=-2.338;QD=0.48;ReadPosRankSum=-1.178;VQSLOD=1.1224;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:15:0:0,0,0	0/1:30,1:25:7.74:8,0,23	0/0:28,0:3:2.99:0,3,23	0/0:41,0:5:3.01:0,3,40	0/0:72,4:61:12.59:0,13,133	0/0:43,1:34:0.99:0,1,60	0/0:55,0:37:5.92:0,6,73	1/1:51,0:13:1.25:3,1,0	0/1:64,4:59:19.27:19,0,65	0/1:103,2:85:99:157,0,322	0/0:45,1:39:6.01:0,6,56	0/1:51,4:48:10.93:11,0,20	0/1:66,4:56:23.61:157,0,24	0/1:71,3:60:46.17:60,0,46	0/0:81,2:61:4.29:0,4,49	0/1:60,1:51:24.20:24,0,77	0/0:13,0:10:4.78:0,5,25	0/0:12,0:11:2.67:0,3,11	0/0:45,0:22:14.06:0,14,86	0/1:76,5:64:35.53:36,0,114	0/1:58,1:43:50.70:51,0,61	0/1:72,1:67:11.79:12,0,47	0/0:61,2:46:10.78:0,11,177	0/0:64,0:54:7.73:0,8,40	0/1:82,2:70:6.59:7,0,31	0/0:18,0:12:8.34:0,8,58	0/1:17,0:15:5.10:5,0,71	0/0:11,0:9:11.07:0,11,136
chr10	2479846	.	A	AGT	263.41	PASS	AB=0.992;AC=13;AF=0.232;AN=56;BaseQRankSum=1.529;DP=1222;FS=36.773;HRun=0;HaplotypeScore=251.6563;InbreedingCoeff=-0.1969;MQ=29.42;MQ0=52;MQRankSum=0.669;QD=0.49;ReadPosRankSum=4.862;VQSLOD=1.4435;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:16:2.49:0,2,10	0/1:32,1:25:17.55:18,0,56	0/0:9,0:2:2.99:0,3,23	0/0:8,0:2:3.01:0,3,40	0/1:78,0:66:24.79:25,0,47	0/1:36,0:31:3.53:4,0,34	0/0:62,1:45:17.22:0,17,144	0/0:25,0:2:4.35:0,4,17	0/0:57,0:52:19.49:0,19,139	0/1:103,0:80:99:184,0,389	0/1:38,0:34:16.27:19,0,16	0/0:42,0:39:16.10:0,16,85	0/0:55,0:48:24.17:0,24,366	0/0:65,0:58:8.71:0,9,118	0/0:65,0:58:8.39:0,8,94	0/1:49,0:45:4.13:4,0,131	1/1:10,0:7:5.75:32,6,0	0/0:9,0:8:7.17:0,7,47	0/0:39,0:25:20.72:0,21,193	0/0:76,1:66:0.13:0,0,155	0/0:54,0:49:11.16:0,11,76	0/1:65,2:59:13.68:14,0,52	0/1:55,1:46:30.51:34,0,31	0/1:45,0:42:12.39:13,0,12	0/0:79,0:71:2:0,2,65	0/1:17,0:13:23.42:23,0,68	0/0:13,0:12:11.05:0,11,62	0/1:9,0:8:35.94:36,0,46
chr10	2479848	.	AGT	A	253	PASS	AB=0.980;AC=11;AF=0.204;AN=54;BaseQRankSum=0.879;DP=1235;FS=0.000;HRun=0;HaplotypeScore=253.8833;InbreedingCoeff=-0.1025;MQ=29.53;MQ0=49;MQRankSum=-5.064;QD=0.64;ReadPosRankSum=-3.021;VQSLOD=1.6050;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,1:15:3.36:0,3,20	0/1:33,0:25:12.98:13,0,102	./.	0/0:6,0:1:2.04:0,2,6	0/0:78,0:68:26.89:0,27,341	0/0:35,1:32:16.42:0,16,184	0/0:68,0:50:7.82:0,8,183	0/1:27,0:2:8.38:8,0,12	0/0:56,1:53:13.13:0,13,135	0/0:100,2:81:32.40:0,32,1052	0/0:41,0:38:12.01:0,12,156	0/0:41,1:39:18.27:0,18,128	0/1:53,0:47:32.08:32,0,239	0/1:65,1:59:25.59:26,0,171	0/0:62,1:58:10.79:0,11,142	0/0:50,0:45:13.63:0,14,305	0/0:10,0:7:3.84:0,4,21	0/1:9,0:8:28.81:29,0,41	0/1:44,0:27:41.53:42,0,217	0/1:78,0:68:3.72:4,0,322	0/1:49,6:50:99:107,0,228	0/0:70,0:61:13.32:0,13,160	0/0:55,0:46:27.04:0,27,401	0/0:45,1:43:16.88:0,17,99	0/0:76,1:70:6.52:0,7,137	1/1:17,0:14:5.09:102,5,0	0/1:12,1:12:28.68:29,0,32	0/0:9,0:8:2.74:0,3,86
chr10	2479850	.	T	TGTGA	482	PASS	AB=0.986;AC=15;AF=0.268;AN=56;BaseQRankSum=2.413;DP=1266;FS=12.635;HRun=0;HaplotypeScore=278.2407;InbreedingCoeff=-0.1075;MQ=29.69;MQ0=49;MQRankSum=-5.147;QD=0.91;ReadPosRankSum=1.509;VQSLOD=1.1612;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:15:2.63:29,3,0	0/1:33,2:27:71.03:71,0,105	0/0:5,0:1:0:0,0,0	0/0:7,0:1:2.22:0,2,7	0/0:81,0:70:6.50:0,7,208	0/1:35,0:32:8.54:9,0,151	0/0:71,1:55:11.59:0,12,177	0/1:32,0:3:7.84:15,0,8	0/0:57,0:52:0.66:0,1,251	0/1:102,2:82:99:139,0,768	0/0:42,1:39:11:0,11,101	0/0:41,0:39:19.20:0,19,157	0/0:54,0:50:14.63:0,15,677	0/1:69,0:61:11.86:12,0,374	0/0:63,0:57:11.98:0,12,216	0/1:49,0:46:44.52:45,0,376	1/1:10,0:7:5.92:39,6,0	0/0:9,0:8:5.41:0,5,77	0/1:43,0:27:26.10:26,0,422	0/0:81,0:70:11.73:0,12,385	0/1:54,0:51:44.61:45,0,281	0/0:68,2:63:16.74:0,17,185	0/0:55,2:48:25.08:0,25,249	0/1:45,0:45:77.17:126,0,77	0/0:79,0:71:10.68:0,11,184	0/1:19,0:16:44.91:45,0,57	0/0:13,0:12:11.23:0,11,61	0/1:10,0:9:32.41:32,0,56
chr10	2479914	.	A	AGTGT	115.35	PASS	AB=0.993;AC=6;AF=0.107;AN=56;BaseQRankSum=5.668;DP=1422;FS=58.827;HRun=0;HaplotypeScore=280.5149;InbreedingCoeff=0.0819;MQ=30.29;MQ0=89;MQRankSum=-5.421;QD=0.44;ReadPosRankSum=-1.427;VQSLOD=0.3831;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:16:10.84:0,11,132	0/0:31,0:28:40.86:0,41,553	0/0:24,0:3:8.04:0,8,75	0/0:46,0:10:20.92:0,21,293	0/0:54,0:52:18.06:0,18,308	0/0:37,0:32:15.67:0,16,280	0/0:86,0:67:32.76:0,33,615	0/0:88,0:42:92.38:0,92,1217	0/1:53,1:46:29.71:30,0,520	0/1:102,0:71:99:148,0,1413	0/0:43,0:36:27.08:0,27,471	0/1:43,0:40:25.91:26,0,324	0/0:43,0:40:11.85:0,12,885	0/0:55,0:44:27.91:0,28,451	0/0:77,2:67:30.38:0,30,508	0/1:61,0:49:19.58:20,0,468	1/1:2,0:2:1.82:5,2,0	0/0:14,0:12:13.01:0,13,350	0/0:46,1:29:24.66:0,25,669	0/0:63,0:51:35.56:0,36,647	0/0:84,1:65:45.15:0,45,794	0/0:60,1:53:17.98:0,18,320	0/0:56,0:46:24.08:0,24,404	0/0:52,2:43:26.75:0,27,471	0/0:68,0:59:33.62:0,34,550	0/0:62,0:48:81.17:0,81,1026	0/0:23,0:21:20.41:0,20,278	0/0:16,0:15:33.92:0,34,318
chr10	2479916	.	A	AGTGTGT	313.47	PASS	AB=0.972;AC=10;AF=0.179;AN=56;BaseQRankSum=7.220;DP=1413;FS=34.015;HRun=0;HaplotypeScore=300.4547;InbreedingCoeff=-0.0243;MQ=30.54;MQ0=90;MQRankSum=-6.678;QD=0.89;ReadPosRankSum=-2.136;VQSLOD=0.8864;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:15:13.80:0,14,211	0/0:29,0:26:40.94:0,41,747	0/0:25,0:3:7.23:0,7,92	0/0:45,0:10:18.06:0,18,394	0/0:53,0:51:19.32:0,19,387	0/0:38,0:33:14.55:0,15,362	0/0:84,1:67:37.64:0,38,792	0/0:89,0:38:84.89:0,85,1357	0/1:52,1:44:69.54:70,0,689	0/1:96,2:68:99:274,0,1726	0/0:44,0:37:26.96:0,27,582	0/1:42,1:40:12.21:12,0,410	0/1:41,1:39:12.99:13,0,1158	0/0:55,1:45:27.52:0,28,487	0/0:78,1:67:33.57:0,34,728	0/1:59,4:51:39.58:40,0,602	1/1:2,0:2:2.98:22,3,0	0/1:13,0:11:8.88:9,0,432	0/0:48,2:28:38.48:0,38,865	0/0:60,0:49:45.23:0,45,807	0/0:87,0:65:48.02:0,48,1001	0/0:61,0:53:24.05:0,24,444	0/0:54,0:42:24.04:0,24,471	0/0:55,1:44:28.79:0,29,642	0/0:68,0:59:31.77:0,32,751	0/0:61,1:47:3.48:0,3,1100	0/1:21,2:21:0.40:0,0,311	0/1:15,0:14:2.78:3,0,274
chr10	2479918	.	A	AGT	1807.62	PASS	AB=0.845;AC=9;AF=0.161;AN=56;BaseQRankSum=3.688;DP=1431;FS=10.761;HRun=0;HaplotypeScore=269.3703;InbreedingCoeff=0.2208;MQ=30.76;MQ0=89;MQRankSum=-3.835;QD=6.85;ReadPosRankSum=2.502;VQSLOD=1.6417;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:20,0:16:13.35:13,0,42	0/0:28,0:25:44.48:0,44,368	0/0:30,0:3:5.92:0,6,42	0/0:48,0:9:17.75:0,18,176	0/0:51,0:50:23.89:0,24,224	0/0:37,0:33:15.02:0,15,184	0/0:86,0:70:11.69:0,12,371	0/1:88,0:38:99:256,0,264	0/1:53,0:44:12.92:13,0,319	0/0:97,0:71:43.69:0,44,955	0/0:44,0:39:27.04:0,27,326	0/0:44,0:39:17.06:0,17,180	0/0:40,0:39:44.83:0,45,618	0/0:56,0:46:15.99:0,16,263	0/0:77,0:70:36.07:0,36,349	0/0:62,0:53:2.82:0,3,301	1/1:3,0:3:3.83:20,4,0	0/0:14,0:13:7.04:0,7,256	0/0:57,0:30:31.72:0,32,398	0/0:57,0:50:43.70:0,44,404	0/0:83,0:63:51.01:0,51,559	0/0:61,0:53:24.27:0,24,250	0/0:53,0:40:17.89:0,18,158	0/0:55,0:45:32.79:0,33,351	0/0:63,0:57:31.32:0,31,354	0/1:28,24:45:99:843,0,161	0/1:11,11:21:35.88:400,0,36	1/1:8,7:14:14.39:403,14,0
chr10	2479934	.	TGAGAGAGAGA	T	229.77	PASS	AB=0.983;AC=6;AF=0.107;AN=56;BaseQRankSum=5.806;DP=1383;FS=6.283;HRun=0;HaplotypeScore=320.3306;InbreedingCoeff=0.1169;MQ=29.93;MQ0=103;MQRankSum=-3.409;QD=1.20;ReadPosRankSum=0.252;VQSLOD=0.9145;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:12:9.03:0,9,266	0/0:28,1:28:42.05:0,42,1371	0/0:35,0:2:3.01:0,3,116	0/0:52,0:12:33.11:0,33,1027	0/0:45,0:41:24.04:0,24,1004	0/0:33,0:29:16.09:0,16,654	0/0:80,1:64:2.03:0,2,1956	0/0:95,0:35:96.33:0,96,3137	0/1:49,0:42:22.58:23,0,1351	0/1:91,2:65:99:199,0,3601	0/0:40,1:35:23.97:0,24,953	0/0:47,0:40:15.78:0,16,932	0/0:39,0:39:56.98:0,57,2109	0/0:45,0:38:32.29:0,32,810	0/0:77,0:66:35.85:0,36,1386	0/0:68,0:57:51.04:0,51,1494	1/1:1,0:3:4.57:59,5,0	0/1:17,0:15:34.52:35,0,1367	0/0:59,0:28:39.46:0,39,1533	0/0:45,0:35:23.06:0,23,993	0/0:84,2:63:53.75:0,54,2240	0/0:40,3:38:15.74:0,16,739	0/0:45,1:34:17.75:0,18,857	0/0:56,0:46:39.57:0,40,1780	0/0:59,2:55:44.89:0,45,1453	0/0:56,0:39:94.75:0,95,3210	0/1:25,0:23:35.46:35,0,1208	0/0:18,0:17:37.05:0,37,1424
chr10	2480648	.	C	CT	1074.47	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.135;DP=672;FS=0.000;HRun=1;HaplotypeScore=79.2810;InbreedingCoeff=0.9035;MQ=83.03;MQ0=0;MQRankSum=-4.004;QD=37.05;ReadPosRankSum=1.880;VQSLOD=3.9985;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:90.28:0,90,1152	0/0:13,0:13:36.12:0,36,467	0/0:21,0:21:63.19:0,63,796	0/0:20,0:20:57.18:0,57,734	0/0:21,0:21:63.20:0,63,817	0/0:26,0:26:78.24:0,78,995	0/0:22,0:22:66.21:0,66,856	0/0:30,0:30:78.24:0,78,988	0/0:29,0:29:87.28:0,87,1127	0/0:32,0:32:96.30:0,96,1232	0/0:14,0:14:42.14:0,42,544	0/0:26,0:26:78.25:0,78,1013	0/0:31,0:31:90.28:0,90,1154	0/0:26,0:26:69.22:0,69,893	0/0:36,0:36:99:0,105,1362	0/0:25,0:25:75.23:0,75,958	1/1:0,29:29:78.26:1169,78,0	0/0:8,0:8:24.08:0,24,312	0/0:27,0:27:71.57:0,72,864	0/0:26,0:26:78.25:0,78,1013	0/0:30,0:30:84.27:0,84,1090	0/0:22,0:22:66.21:0,66,853	0/0:24,0:24:72.22:0,72,917	0/0:14,0:14:42.12:0,42,528	0/0:19,0:19:54.18:0,54,700	0/0:42,0:42:99:0,123,1595	0/0:26,0:26:78.23:0,78,982	0/0:3,0:3:6.02:0,6,78
chr10	2482051	.	C	CACAT	7987.93	PASS	AB=0.603;AC=11;AF=0.196;AN=56;BaseQRankSum=-13.348;DP=821;FS=0.763;HRun=0;HaplotypeScore=122.2401;InbreedingCoeff=0.8843;MQ=66.57;MQ0=2;MQRankSum=-1.010;QD=39.94;ReadPosRankSum=-0.925;VQSLOD=5.0550;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,17:24:36.12:892,36,0	0/0:14,0:14:42.13:0,42,669	0/0:34,0:25:27.07:0,27,603	0/0:28,0:17:17.20:0,17,224	0/0:29,0:29:81.26:0,81,1328	0/0:23,0:23:57.17:0,57,922	0/0:13,0:13:27.09:0,27,453	1/1:18,18:38:66.09:1100,66,0	0/0:28,0:28:63.20:0,63,1024	0/0:39,0:39:96.33:0,96,1612	0/0:16,0:16:39.13:0,39,629	0/0:28,0:28:75.23:0,75,1201	0/0:41,0:41:93.28:0,93,1520	0/0:26,0:26:66.23:0,66,1108	0/0:32,0:32:84.29:0,84,1404	0/0:20,0:20:48.16:0,48,799	1/1:9,29:39:54.19:1339,54,0	0/0:19,0:19:39.13:0,39,643	0/0:19,0:18:36.05:0,36,518	0/0:41,0:41:99:0,99,1654	0/0:27,0:27:69.22:0,69,1115	0/0:41,0:41:99:0,111,1796	0/0:32,0:32:78.27:0,78,1299	0/0:33,0:33:78.25:0,78,1269	0/0:38,0:38:90.28:0,90,1452	0/1:13,25:38:54.80:1843,0,55	1/1:10,34:45:84.29:2070,84,0	1/1:1,14:16:30.10:744,30,0
chr10	2486380	.	CCCAA	C	2241.40	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=5.202;DP=350;FS=3.448;HRun=0;HaplotypeScore=63.3454;InbreedingCoeff=0.8351;MQ=77.09;MQ0=10;MQRankSum=-4.344;QD=23.84;ReadPosRankSum=6.215;VQSLOD=2.9259;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,0:10:21.04:235,21,0	0/0:1,0:1:3.01:0,3,44	0/0:70,0:25:31.44:0,31,518	0/0:52,0:20:27.89:0,28,382	0/0:10,0:10:26.52:0,27,444	0/0:5,0:5:15.05:0,15,313	0/0:11,0:11:33.11:0,33,704	1/1:3,16:19:26.81:570,27,0	0/0:5,0:5:15.05:0,15,336	0/0:7,0:7:17.79:0,18,262	0/0:9,0:9:25.89:0,26,460	0/0:9,0:9:22.32:0,22,408	0/0:10,0:10:30.09:0,30,589	0/0:6,0:6:18.05:0,18,367	0/0:6,0:6:15.05:0,15,210	0/0:8,0:8:21.07:0,21,391	1/1:7,0:21:58.89:650,59,0	0/0:9,0:9:27.09:0,27,492	0/0:8,0:8:24.07:0,24,394	0/0:9,0:9:27.09:0,27,460	0/0:4,0:4:10.28:0,10,209	0/0:5,0:5:14.72:0,15,234	0/1:5,0:5:12.61:13,0,185	0/0:7,0:7:20.81:0,21,371	0/0:5,0:5:12.46:0,12,150	1/1:0,8:8:20.95:273,21,0	1/1:1,12:13:27.09:467,27,0	1/1:0,18:18:12.04:220,12,0
chr10	2486414	.	A	AATGAATAAC	2733.48	PASS	AB=0.942;AC=5;AF=0.089;AN=56;BaseQRankSum=3.554;DP=332;FS=2.785;HRun=0;HaplotypeScore=94.6471;InbreedingCoeff=0.3859;MQ=81.44;MQ0=1;MQRankSum=-6.620;QD=32.93;ReadPosRankSum=1.266;VQSLOD=3.1170;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:48.01:0,48,1201	0/0:4,0:4:12.04:0,12,352	0/1:19,0:12:2.04:2,0,508	0/1:26,0:17:4.51:5,0,549	0/0:11,0:11:27.07:0,27,725	0/0:9,0:9:27.08:0,27,728	0/0:9,0:9:27.09:0,27,702	0/0:30,0:30:78.25:0,78,2050	0/0:10,0:10:27.09:0,27,791	0/0:7,0:7:18.06:0,18,507	0/0:6,0:6:18.06:0,18,500	0/0:9,0:9:24.05:0,24,563	0/0:11,0:11:33.11:0,33,955	0/0:8,0:8:24.08:0,24,704	0/0:6,0:6:18.06:0,18,528	0/0:8,0:8:21.07:0,21,616	1/1:10,14:25:66.23:2726,66,0	0/1:9,1:10:99:111,0,685	0/0:13,0:13:33.09:0,33,835	0/0:11,0:11:33.11:0,33,918	0/0:10,0:10:30.10:0,30,835	0/0:8,0:8:18.06:0,18,528	0/0:12,0:12:27.09:0,27,763	0/0:7,0:7:21.07:0,21,616	0/0:7,0:7:21.07:0,21,616	0/0:8,0:8:21.07:0,21,615	0/0:14,0:14:33.11:0,33,924	0/0:12,0:12:12.04:0,12,352
chr10	2488510	.	CTGT	C	206.73	PASS	AB=0.833;AC=10;AF=0.179;AN=56;BaseQRankSum=7.624;DP=426;FS=28.153;HRun=0;HaplotypeScore=94.5847;InbreedingCoeff=-0.2430;MQ=52.21;MQ0=24;MQRankSum=-5.951;QD=1.78;ReadPosRankSum=-0.660;VQSLOD=-0.0116;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:18,0:17:21.75:31,0,22	0/0:2,2:4:4.65:0,5,130	0/0:57,0:16:29.44:0,29,334	0/0:71,0:13:19.77:0,20,187	0/0:18,1:19:30.57:0,31,647	0/0:16,0:15:11.56:0,12,422	0/0:10,0:10:25.64:0,26,533	0/0:14,0:12:19.11:0,19,147	0/0:11,3:14:4.57:0,5,370	0/1:12,2:14:28.64:29,0,714	0/0:4,0:4:6.02:0,6,135	0/0:9,0:9:9.03:0,9,171	0/1:3,2:7:9.06:9,0,187	0/1:6,1:7:12.77:13,0,233	0/0:10,0:10:15.05:0,15,317	0/1:6,1:6:20.16:20,0,174	0/0:10,0:10:15.23:0,15,100	0/0:8,0:8:21.07:0,21,490	0/0:11,0:6:15.05:0,15,299	0/1:7,3:10:70.48:70,0,227	0/0:15,0:14:18.06:0,18,429	0/1:18,3:21:45.13:45,0,381	0/0:14,0:14:24.04:0,24,506	0/0:19,0:18:36.59:0,37,813	0/1:10,2:12:18.23:18,0,433	0/1:11,2:12:36.86:37,0,215	0/0:3,0:3:7:0,7,36	0/1:4,3:6:25.91:75,0,26
chr10	2488524	.	C	CCT	215.12	PASS	AB=0.979;AC=12;AF=0.214;AN=56;BaseQRankSum=8.332;DP=405;FS=27.636;HRun=0;HaplotypeScore=104.8167;InbreedingCoeff=-0.0803;MQ=43.63;MQ0=24;MQRankSum=-5.522;QD=1.64;ReadPosRankSum=1.213;VQSLOD=0.2595;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:16:17.09:0,17,133	0/1:6,0:6:9.82:10,0,94	0/0:33,0:6:0.16:0,0,95	0/0:47,0:7:9.29:0,9,66	0/0:18,1:19:20.52:0,21,320	0/0:13,1:13:7.49:0,7,206	0/0:9,0:9:23.19:0,23,319	0/1:23,0:20:83.30:83,0,349	0/0:22,0:20:24.70:0,25,335	0/1:15,1:15:65.12:65,0,267	0/0:5,0:5:3.01:0,3,46	0/0:8,0:7:7.93:0,8,73	0/1:7,0:7:6.50:7,0,157	0/1:8,0:8:13.13:13,0,132	0/0:8,0:8:23.69:0,24,255	0/0:8,0:6:0.86:0,1,142	0/0:7,0:7:11.52:0,12,106	0/0:9,0:9:4.33:0,4,228	0/0:11,0:5:12.03:0,12,157	0/1:15,0:14:5.21:5,0,127	0/0:16,0:16:29.68:0,30,364	0/1:19,0:20:12.90:13,0,214	0/0:18,2:20:17.34:0,17,269	0/0:20,0:19:38.79:0,39,540	0/1:15,2:16:55.79:56,0,189	0/1:11,0:10:28.93:29,0,189	0/1:2,0:2:0:0,0,0	1/1:4,1:4:7.57:71,8,0
chr10	2488543	.	C	CT	128.08	PASS	AB=0.954;AC=16;AF=0.286;AN=56;BaseQRankSum=6.247;DP=267;FS=13.753;HRun=0;HaplotypeScore=79.9392;InbreedingCoeff=-0.1226;MQ=45.41;MQ0=6;MQRankSum=-3.813;QD=1.09;ReadPosRankSum=0.165;VQSLOD=0.0530;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:10:14.87:0,15,159	0/0:6,0:6:9.02:0,9,88	0/0:9,0:2:5.95:0,6,46	0/0:12,0:3:5.91:0,6,46	0/0:14,0:14:12.02:0,12,136	0/0:9,2:10:4.25:0,4,309	0/0:6,0:6:12.19:0,12,145	0/1:16,0:14:54.96:55,0,200	0/0:18,1:18:5.60:0,6,309	0/1:9,0:9:17.07:17,0,126	0/0:5,0:5:0:0,0,0	0/1:7,1:7:16.74:17,0,126	0/1:5,0:5:12.45:12,0,51	0/1:9,0:7:12.04:12,0,53	0/0:8,0:8:20.95:0,21,195	0/1:5,1:5:21.84:22,0,90	0/0:5,0:5:6.87:0,7,85	0/1:4,0:4:11.42:11,0,35	1/1:3,0:2:2.90:16,3,0	0/0:14,0:13:4.23:0,4,65	0/0:13,0:12:23.02:0,23,252	0/1:15,1:16:9.89:10,0,152	0/1:13,1:14:32.41:32,0,125	0/0:17,0:16:26.91:0,27,267	0/1:11,3:14:12.09:12,0,231	0/1:8,0:7:32.64:33,0,45	0/1:2,0:2:0:0,0,0	1/1:3,0:3:3.86:23,4,0
chr10	2488545	.	C	CT	396.25	PASS	AB=0.786;AC=17;AF=0.304;AN=56;BaseQRankSum=6.813;DP=249;FS=7.316;HRun=0;HaplotypeScore=84.0355;InbreedingCoeff=-0.0981;MQ=46.19;MQ0=5;MQRankSum=-5.779;QD=3.07;ReadPosRankSum=0.134;VQSLOD=2.2037;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:14.75:0,15,156	0/1:4,2:6:0.24:0,0,75	0/0:5,0:2:6.01:0,6,55	0/1:11,0:3:0.48:0,0,43	0/0:11,0:12:9.01:0,9,108	0/1:8,3:10:5.18:5,0,304	0/0:5,1:6:11.72:0,12,144	0/1:11,4:14:99:193,0,206	0/0:14,5:18:18.87:0,19,278	0/1:6,3:9:45.49:45,0,109	0/0:4,1:5:0:0,0,0	0/0:5,1:6:6.79:0,7,133	0/1:3,1:5:30.47:30,0,50	0/1:6,3:7:42.45:42,0,63	0/0:7,0:7:14.88:0,15,129	0/0:4,2:5:2.62:0,3,86	0/0:5,0:5:4.50:0,4,81	0/1:3,1:4:32.45:32,0,37	1/1:1,2:2:5.85:59,6,0	0/1:8,5:13:6.88:7,0,51	0/0:10,1:10:14.49:0,14,221	0/1:14,1:15:20.99:21,0,128	0/0:11,3:14:2.76:0,3,89	0/0:14,0:13:14.90:0,15,148	0/1:10,4:14:22.65:23,0,203	0/1:6,2:7:22.86:40,0,23	0/1:1,1:2:0:0,0,0	1/1:2,1:3:5.87:40,6,0
chr10	2489378	.	C	CCT	1283.33	PASS	AB=0.941;AC=29;AF=0.604;AN=48;BaseQRankSum=4.257;DP=256;FS=0.000;HRun=0;HaplotypeScore=118.9534;InbreedingCoeff=0.0051;MQ=34.59;MQ0=13;MQRankSum=0.070;QD=5.58;ReadPosRankSum=-0.334;VQSLOD=3.0351;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:10,1:10:28.24:28,0,29	1/1:0,0:1:3.01:32,3,0	0/0:5,0:1:3.01:0,3,34	./.	0/1:15,0:14:0.03:1,0,0	0/1:12,2:13:4.46:93,0,4	0/1:6,2:7:8.07:70,0,8	0/1:20,1:17:32.81:131,0,33	./.	0/1:17,1:17:47.46:222,0,47	0/1:14,0:14:7.69:51,0,8	0/1:5,0:4:0:0,0,0	0/0:6,0:6:1.53:0,2,9	0/1:2,0:2:0:0,0,0	0/1:2,0:2:0:0,0,0	0/1:3,1:3:7.92:8,0,8	1/1:19,1:19:9.50:142,9,0	1/1:5,0:5:5.60:31,6,0	0/1:12,0:8:47.18:123,0,47	1/1:6,0:6:2.02:10,2,0	./.	1/1:16,0:15:6.39:87,6,0	1/1:14,1:15:8.11:28,8,0	0/1:10,0:10:0.02:0,0,0	1/1:9,0:9:6.91:41,7,0	1/1:21,0:20:20.74:311,21,0	0/0:2,0:2:4.56:0,5,33	./.
chr10	2489379	.	C	CTG	909.25	PASS	AB=0.940;AC=26;AF=0.542;AN=48;BaseQRankSum=2.481;DP=259;FS=0.000;HRun=0;HaplotypeScore=117.7481;InbreedingCoeff=-0.1000;MQ=34.53;MQ0=13;MQRankSum=-0.799;QD=4.10;ReadPosRankSum=-1.449;VQSLOD=2.4970;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:10:5.45:0,5,76	1/1:1,0:1:2.84:14,3,0	0/0:5,0:1:3.01:0,3,42	./.	0/1:13,2:14:0.28:1,0,0	0/1:13,1:13:37.62:46,0,38	0/1:8,0:7:10.26:70,0,10	0/1:19,2:17:54.53:120,0,55	./.	0/1:17,2:18:97.46:188,0,97	0/1:15,0:14:14.36:14,0,26	0/1:5,0:4:0:0,0,0	0/0:4,1:6:2.16:0,2,14	0/1:2,0:2:0.21:0,0,0	0/1:2,0:2:0:0,0,0	0/1:4,1:4:6.58:7,0,8	0/1:20,1:20:54.31:73,0,54	1/1:5,0:5:4.64:12,5,0	0/1:10,2:8:60.73:154,0,61	1/1:6,0:6:2.02:10,2,0	./.	1/1:15,1:15:5.67:51,6,0	1/1:13,2:15:8.11:28,8,0	0/1:10,0:10:0.02:0,0,1	1/1:9,0:9:1.72:23,2,0	0/1:18,3:20:84.22:222,0,84	0/0:2,0:2:5.38:0,5,38	./.
chr10	2489382	.	TCTC	T	737.94	PASS	AB=0.957;AC=16;AF=0.333;AN=48;BaseQRankSum=1.573;DP=270;FS=0.000;HRun=0;HaplotypeScore=117.8055;InbreedingCoeff=-0.2470;MQ=33.98;MQ0=19;MQRankSum=-0.025;QD=3.99;ReadPosRankSum=1.800;VQSLOD=2.3553;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:11,0:10:37.76:38,0,40	1/1:2,0:1:2.80:13,3,0	0/0:6,0:1:3:0,3,27	./.	0/0:14,1:14:0.40:0,0,1	0/1:14,0:13:39.97:88,0,40	0/1:8,0:7:12.83:53,0,13	0/1:21,0:17:12.79:13,0,153	./.	0/1:19,1:18:99:127,0,109	0/1:15,1:15:6.22:85,0,6	1/1:5,0:4:0.27:0,0,0	0/0:5,0:6:4.07:0,4,13	0/0:2,0:2:0:0,0,0	0/1:2,0:2:0:0,0,0	0/0:5,0:4:6.40:0,6,27	0/1:19,1:20:72.40:72,0,114	0/0:5,0:5:2.65:0,3,21	0/1:10,2:8:64.77:151,0,65	0/0:6,0:6:2.12:0,2,13	./.	0/1:16,0:15:5.59:33,0,6	0/1:14,1:15:6.64:7,0,31	0/0:10,0:10:0.02:0,0,1	0/0:10,0:10:2.65:0,3,41	0/1:19,3:21:63.01:175,0,63	0/0:2,0:2:2.73:0,3,36	./.
chr10	2489385	.	C	CCT	1451.68	PASS	AB=0.954;AC=28;AF=0.560;AN=50;BaseQRankSum=4.993;DP=293;FS=0.000;HRun=0;HaplotypeScore=117.9551;InbreedingCoeff=-0.0743;MQ=32.83;MQ0=26;MQRankSum=1.104;QD=5.81;ReadPosRankSum=0.426;VQSLOD=2.7502;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:14,0:10:39.90:40,0,55	1/1:2,0:1:3.01:35,3,0	0/0:8,0:1:2.99:0,3,24	0/0:16,0:3:0.94:0,1,2	0/1:16,0:14:0.03:1,0,0	0/1:13,2:13:24.59:110,0,25	0/1:8,0:7:22.58:60,0,23	0/1:22,0:17:11.92:147,0,12	./.	0/1:19,0:18:71.08:241,0,71	0/1:16,0:15:24:76,0,24	0/1:5,0:4:0:0,0,0	0/0:5,1:6:3.10:0,3,34	0/1:1,1:2:0:0,0,0	0/1:2,0:2:0:0,0,0	0/1:6,0:5:4.94:77,0,5	0/1:21,1:21:75.42:204,0,75	1/1:5,0:5:2.60:6,3,0	0/1:12,0:8:57.63:105,0,58	1/1:6,0:6:2.49:11,2,0	./.	1/1:13,1:14:2.85:71,3,0	1/1:17,0:15:7.73:29,8,0	0/1:10,0:10:0.02:0,0,0	1/1:10,0:10:13.25:71,13,0	1/1:22,0:21:21.71:294,22,0	0/0:2,0:2:3.90:0,4,42	./.
chr10	2489386	.	C	CTG	987.46	PASS	AB=0.977;AC=22;AF=0.440;AN=50;BaseQRankSum=4.498;DP=304;FS=0.000;HRun=0;HaplotypeScore=121.0917;InbreedingCoeff=-0.1259;MQ=32.34;MQ0=32;MQRankSum=-0.593;QD=4.08;ReadPosRankSum=1.439;VQSLOD=1.9964;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:15,0:10:7.03:7,0,82	1/1:2,0:1:2.98:21,3,0	0/0:9,0:1:3.01:0,3,34	0/0:18,0:3:3.45:0,3,23	0/1:18,0:14:0.29:1,0,0	0/1:17,0:13:56.97:74,0,57	0/1:7,1:7:36.49:48,0,36	0/1:22,0:17:98.65:99,0,142	./.	0/1:19,1:18:99:145,0,174	0/1:16,0:15:29.70:30,0,45	0/0:5,0:4:0.47:0,0,1	0/0:6,0:6:4.80:0,5,61	0/1:3,0:2:0.21:0,0,0	0/1:2,0:2:0:0,0,0	0/1:6,0:5:12.65:39,0,13	0/1:20,1:21:99:143,0,137	0/0:5,0:5:3.39:0,3,10	0/1:12,1:8:89.34:137,0,89	0/0:6,0:6:2.79:0,3,8	./.	1/1:16,0:14:8.45:65,8,0	1/1:17,0:15:9.94:38,10,0	0/1:11,0:11:0.02:0,0,1	1/1:11,0:11:5.05:47,5,0	0/1:22,1:21:82.25:224,0,82	0/0:2,0:2:4.26:0,4,49	./.
chr10	2489389	.	TCTC	T	1253.05	PASS	AB=0.987;AC=24;AF=0.462;AN=52;BaseQRankSum=4.236;DP=321;FS=7.793;HRun=0;HaplotypeScore=120.8984;InbreedingCoeff=-0.2421;MQ=31.64;MQ0=39;MQRankSum=0.583;QD=4.99;ReadPosRankSum=1.865;VQSLOD=2.1516;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:15,1:10:39.45:39,0,70	1/1:2,0:1:2.80:13,3,0	0/0:10,0:1:3.01:0,3,34	0/0:22,0:5:3.91:0,4,22	0/0:18,0:14:0.83:0,1,2	0/1:17,0:13:30.03:176,0,30	0/1:9,0:7:18.83:65,0,19	0/1:22,0:17:30.08:48,0,30	./.	0/1:21,0:18:86.18:173,0,86	0/1:15,1:15:14.78:89,0,15	0/1:5,0:4:0.01:0,0,0	0/1:6,0:6:8.38:8,0,34	0/0:3,0:2:0:0,0,0	0/1:2,0:2:0:0,0,0	0/1:6,0:5:0.75:25,0,1	0/1:22,0:22:99:192,0,170	1/1:5,0:5:0.67:1,1,0	0/1:14,0:8:74.15:95,0,74	1/1:6,0:6:5.67:61,6,0	0/0:12,0:5:6.02:0,6,83	1/1:17,0:14:5.19:68,5,0	0/1:16,1:15:8.34:8,0,17	0/1:11,0:11:0.34:0,0,1	0/1:12,0:11:20.77:64,0,21	0/1:23,1:21:15.50:252,0,16	0/0:2,0:2:3.48:0,3,55	./.
chr10	2489391	.	TC	T	490.84	PASS	AB=0.973;AC=22;AF=0.423;AN=52;BaseQRankSum=5.109;DP=333;FS=2.902;HRun=2;HaplotypeScore=122.2893;InbreedingCoeff=-0.0297;MQ=34.05;MQ0=43;MQRankSum=0.017;QD=2.35;ReadPosRankSum=1.072;VQSLOD=-0.2511;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:18,0:10:37.86:38,0,80	0/0:2,0:1:2.04:0,2,6	0/0:12,0:1:3.01:0,3,30	0/0:25,2:6:2.93:0,3,29	0/0:18,0:14:0.84:0,1,2	0/1:17,0:13:28.73:89,0,29	0/1:8,0:7:11.25:11,0,33	0/0:24,0:17:19.73:0,20,103	./.	0/1:22,0:18:33.24:33,0,123	0/1:16,0:15:35.39:58,0,35	0/1:5,0:4:0.02:0,0,0	0/1:4,2:6:19.42:19,0,38	0/1:3,0:2:0:0,0,0	0/1:2,0:2:0:0,0,0	0/1:6,0:5:7.72:8,0,12	0/1:22,0:22:30.96:31,0,194	1/1:5,0:5:2.94:11,3,0	0/0:14,0:8:18.82:0,19,178	1/1:6,0:6:3.49:38,3,0	0/0:13,0:5:6.02:0,6,78	1/1:17,0:14:5.60:68,6,0	1/1:17,0:15:3.55:22,4,0	0/0:11,0:11:0.62:0,1,2	1/1:12,1:11:6.81:97,7,0	0/1:22,2:21:83.51:102,0,84	0/0:2,0:2:3.48:0,3,45	./.
chr10	2489392	.	C	CCT	1615.95	PASS	AB=0.950;AC=34;AF=0.654;AN=52;BaseQRankSum=5.543;DP=339;FS=12.579;HRun=0;HaplotypeScore=122.5392;InbreedingCoeff=0.0685;MQ=36.49;MQ0=45;MQRankSum=1.586;QD=5.00;ReadPosRankSum=1.525;VQSLOD=1.8271;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:17,0:10:29.92:30,0,40	1/1:2,0:1:3:29,3,0	1/1:11,0:2:0.89:2,1,0	0/1:29,0:7:2.79:3,0,32	0/1:16,1:14:0.03:1,0,0	0/1:14,1:13:17.62:157,0,18	0/1:9,0:7:3.98:43,0,4	1/1:19,2:17:17.22:193,17,0	./.	1/1:23,0:18:29.53:293,30,0	0/1:16,0:15:1.99:88,0,2	0/1:5,0:4:0:0,0,0	0/1:5,1:6:8.13:8,0,25	0/1:4,0:3:0:0,0,0	0/1:2,0:2:0:0,0,0	0/1:5,1:5:2.16:34,0,2	0/1:20,2:22:98.34:152,0,98	1/1:5,0:5:2.10:24,2,0	0/1:14,0:8:21.37:82,0,21	1/1:6,0:6:2.20:15,2,0	0/0:13,0:5:6.02:0,6,73	1/1:16,1:14:9.51:90,10,0	1/1:17,0:15:13.53:87,14,0	0/1:10,0:10:0.02:0,0,0	1/1:14,0:11:20.97:110,21,0	1/1:23,1:21:25.08:303,25,0	0/0:2,0:2:3.48:0,3,39	./.
chr10	2489393	.	C	CTG	1229.07	PASS	AB=0.938;AC=25;AF=0.481;AN=52;BaseQRankSum=3.953;DP=353;FS=6.908;HRun=0;HaplotypeScore=125.0424;InbreedingCoeff=-0.1319;MQ=36.19;MQ0=51;MQRankSum=1.175;QD=4.12;ReadPosRankSum=2.095;VQSLOD=1.6916;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:18,0:10:16.03:16,0,47	1/1:2,0:1:3.01:47,3,0	0/0:16,0:3:5.54:0,6,27	0/1:30,0:7:2.79:3,0,42	0/1:16,2:14:0.29:1,0,0	0/1:16,1:13:39.41:94,0,39	0/1:8,1:7:4.82:51,0,5	0/1:24,0:17:7.26:157,0,7	./.	0/1:25,0:20:59.99:267,0,60	0/1:15,1:14:7.19:48,0,7	0/0:4,1:4:0:0,0,0	0/0:5,1:6:3.67:0,4,47	0/1:4,0:3:0.21:0,0,0	0/1:2,1:2:0:0,0,0	0/1:6,0:5:11.06:20,0,11	0/1:19,4:22:99:109,0,154	0/1:7,1:8:4.33:38,0,4	0/1:14,0:8:42.63:43,0,90	1/1:4,2:6:0.04:0,0,0	0/0:14,0:5:6.02:0,6,91	1/1:12,3:13:9.76:95,10,0	1/1:14,3:15:11.45:84,11,0	0/0:8,2:10:0.45:0,0,1	1/1:15,1:11:1.66:58,2,0	0/1:21,3:21:67.68:226,0,68	0/0:3,0:3:3.48:0,3,47	./.
chr10	2489396	.	TCTC	T	1385.43	PASS	AB=0.983;AC=25;AF=0.481;AN=52;BaseQRankSum=4.388;DP=377;FS=8.778;HRun=0;HaplotypeScore=126.5623;InbreedingCoeff=-0.0841;MQ=35.38;MQ0=59;MQRankSum=0.167;QD=5.19;ReadPosRankSum=2.454;VQSLOD=1.6055;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:18,0:10:33.78:34,0,50	1/1:3,0:2:2.88:15,3,0	0/0:19,0:4:2.98:0,3,21	0/0:37,0:8:7.43:0,7,85	0/0:17,1:14:0.40:0,0,1	0/1:17,0:13:21.09:172,0,21	0/1:11,0:9:1.79:55,0,2	1/1:22,2:17:17.35:215,17,0	./.	0/1:21,4:20:49.12:269,0,49	0/1:16,0:14:4.87:30,0,5	0/1:5,0:4:0:0,0,0	0/1:7,0:7:19.87:20,0,25	0/0:4,0:3:0:0,0,0	0/1:3,0:2:0:0,0,0	1/1:7,0:6:1.28:32,1,0	0/1:22,1:22:99:182,0,149	0/1:9,0:8:29.02:29,0,55	0/1:16,0:8:24.91:25,0,80	1/1:3,3:6:5.19:27,5,0	0/0:14,0:5:6.02:0,6,111	1/1:15,1:13:6.04:66,6,0	0/1:17,0:15:8.21:27,0,8	0/0:9,1:10:0.10:0,0,1	1/1:13,2:11:9.06:113,9,0	0/1:25,1:21:64.36:211,0,64	0/0:5,0:5:9.50:0,10,146	./.
chr10	2489400	.	C	CTG	1346.94	PASS	AB=0.949;AC=27;AF=0.519;AN=52;BaseQRankSum=5.227;DP=388;FS=6.864;HRun=0;HaplotypeScore=128.6163;InbreedingCoeff=0.0729;MQ=39.18;MQ0=70;MQRankSum=-2.004;QD=4.47;ReadPosRankSum=2.791;VQSLOD=2.4297;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:16,0:8:33.26:42,0,33	1/1:2,1:2:5.05:62,5,0	0/1:26,0:6:0.03:0,0,0	0/0:45,0:11:11.03:0,11,139	0/1:15,1:13:0:1,0,0	0/1:16,2:13:11.97:137,0,12	1/1:8,2:8:8.19:85,8,0	1/1:23,0:16:1.18:148,1,0	./.	0/1:23,1:19:28.04:262,0,28	0/1:13,2:14:12.77:25,0,13	0/0:4,1:4:0:0,0,0	0/0:7,0:7:0.12:0,0,8	0/1:4,0:2:0:0,0,0	0/1:4,0:2:0.17:0,0,0	0/1:7,1:6:5.78:21,0,6	0/1:19,3:22:99:170,0,110	0/0:8,0:7:6.55:0,7,76	0/1:17,0:7:11.31:11,0,113	1/1:5,1:6:0.08:0,0,0	0/0:14,0:4:6.02:0,6,92	1/1:12,3:12:10.75:124,11,0	1/1:13,3:13:6.69:82,7,0	0/1:10,0:10:0.02:0,0,0	1/1:15,1:11:15.18:136,15,0	0/1:26,2:21:99:176,0,155	0/0:5,0:5:14.99:0,15,185	./.
chr10	2489403	.	TCTC	T	1359.33	PASS	AB=0.993;AC=25;AF=0.481;AN=52;BaseQRankSum=5.289;DP=410;FS=14.141;HRun=0;HaplotypeScore=129.1936;InbreedingCoeff=0.1412;MQ=40.52;MQ0=74;MQRankSum=-2.363;QD=5.21;ReadPosRankSum=2.828;VQSLOD=1.9862;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:16,0:8:14.23:31,0,14	1/1:2,1:2:4.83:43,5,0	0/0:37,0:7:9.87:0,10,137	0/0:57,0:14:14:0,14,207	0/1:16,0:12:0.08:0,0,0	1/1:18,0:14:18.48:198,18,0	1/1:10,1:8:8.22:140,8,0	1/1:19,1:13:17.42:173,17,0	./.	0/1:24,0:19:32.70:324,0,33	0/1:15,0:13:36.45:47,0,36	0/0:6,0:5:3.01:0,3,40	0/1:8,0:7:5.77:24,0,6	0/0:4,0:2:0:0,0,0	0/0:4,0:2:0.36:0,0,0	1/1:7,1:6:7.61:74,8,0	0/1:23,0:22:81.13:82,0,81	0/0:9,0:8:9.23:0,9,130	0/1:19,0:9:30.27:30,0,165	1/1:6,0:6:4.74:27,5,0	0/0:14,0:5:6.02:0,6,118	1/1:15,0:11:5.91:91,6,0	0/1:15,1:13:6.66:48,0,7	0/0:10,0:10:0.11:0,0,1	1/1:15,1:11:2.34:79,2,0	0/1:26,0:19:63.11:99,0,63	0/0:7,0:7:15.05:0,15,258	./.
chr10	2489405	.	T	TCC	1075.59	PASS	AB=0.991;AC=27;AF=0.519;AN=52;BaseQRankSum=5.010;DP=425;FS=6.301;HRun=2;HaplotypeScore=140.6193;InbreedingCoeff=0.1486;MQ=45.49;MQ0=76;MQRankSum=-0.977;QD=3.19;ReadPosRankSum=3.239;VQSLOD=-0.5227;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:16,0:8:2.44:10,0,2	0/1:3,0:2:3.77:17,0,4	0/0:41,0:8:0.73:0,1,35	0/1:64,0:17:2.90:3,0,172	0/1:15,0:11:0.04:0,0,0	1/1:17,2:14:13.78:194,14,0	0/1:13,2:12:23.20:59,0,23	1/1:20,0:13:16.03:173,16,0	./.	0/1:23,0:19:16.37:156,0,16	0/1:15,0:13:18.58:54,0,19	0/0:5,0:4:3:0,3,26	0/1:8,0:7:1.32:2,0,1	0/1:4,0:2:0:0,0,0	0/1:4,0:2:0.17:0,0,0	1/1:7,1:6:5.19:28,5,0	1/1:21,1:22:5.58:158,6,0	0/0:9,0:8:8.71:0,9,95	0/1:19,0:9:18.40:18,0,118	0/1:5,0:6:0.07:0,0,2	0/0:14,0:5:6.02:0,6,88	1/1:15,0:11:7.90:68,8,0	1/1:15,0:12:7.44:48,7,0	0/0:10,0:10:2.58:0,3,12	1/1:15,0:11:21.67:115,22,0	0/1:26,0:19:57:116,0,57	0/0:7,0:7:17.63:0,18,209	./.
chr10	2489406	.	C	CTTCT	2077.98	PASS	AB=0.973;AC=29;AF=0.580;AN=50;BaseQRankSum=7.348;DP=422;FS=24.286;HRun=0;HaplotypeScore=140.8079;InbreedingCoeff=0.1246;MQ=48.85;MQ0=77;MQRankSum=-1.679;QD=6.17;ReadPosRankSum=4.860;VQSLOD=1.0352;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:15,0:7:15.79:52,0,16	1/1:4,0:3:5.95:78,6,0	0/0:47,0:9:13.65:0,14,119	0/1:68,0:18:0.90:1,0,290	0/1:14,0:11:0:1,0,0	1/1:18,1:13:11.17:216,11,0	0/1:12,0:10:45.48:117,0,45	1/1:17,0:11:13.05:159,13,0	./.	0/1:23,1:20:40.17:525,0,40	0/1:14,0:13:30.38:85,0,30	0/0:4,1:4:2.87:0,3,45	0/1:8,0:7:3.52:11,0,4	./.	1/1:4,0:2:0.39:1,0,0	1/1:8,0:6:7.73:62,8,0	0/1:22,0:22:72.89:169,0,73	0/0:8,0:7:13.10:0,13,149	0/1:17,0:7:25.05:25,0,161	1/1:6,0:6:2.51:24,3,0	0/0:14,0:5:6.02:0,6,125	1/1:15,0:11:13.32:136,13,0	1/1:13,1:11:11.29:99,11,0	0/1:9,0:9:0.05:0,0,1	1/1:15,1:11:15.39:151,15,0	0/1:26,0:19:33.38:319,0,33	0/0:6,0:6:15.05:0,15,275	./.
chr10	2489407	.	C	CTG	1400	PASS	AB=0.960;AC=24;AF=0.462;AN=52;BaseQRankSum=5.131;DP=426;FS=9.388;HRun=0;HaplotypeScore=135.2257;InbreedingCoeff=0.0852;MQ=50.24;MQ0=77;MQRankSum=-1.667;QD=4.43;ReadPosRankSum=3.050;VQSLOD=2.4324;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:7:2.75:48,3,0	0/1:3,1:3:13:66,0,13	0/0:53,0:11:9.87:0,10,111	0/1:69,0:20:8.86:9,0,192	0/1:13,1:11:0.11:0,0,0	1/1:18,1:13:9.31:201,9,0	0/1:13,0:10:59.06:59,0,76	1/1:17,0:10:13.22:111,13,0	./.	0/1:19,1:18:48.94:230,0,49	0/1:14,1:13:14.06:14,0,66	0/0:5,0:4:3.01:0,3,46	0/0:8,1:8:3:0,3,18	0/1:4,0:2:0:0,0,0	0/1:4,0:2:0.17:0,0,0	0/1:8,0:6:14.25:58,0,14	0/1:22,1:22:16.14:224,0,16	0/0:8,0:7:14.94:0,15,175	0/1:17,0:7:2.97:3,0,168	0/0:6,0:6:0.33:0,0,2	0/0:14,0:5:6.02:0,6,92	1/1:11,2:9:11.01:159,11,0	1/1:11,0:10:7.29:78,7,0	0/0:9,0:9:0.88:0,1,2	1/1:17,0:12:19.44:175,19,0	0/1:23,1:18:99:113,0,171	0/0:6,0:6:15.05:0,15,228	./.
chr10	2489408	.	T	TC	30.16	PASS	AB=0.952;AC=13;AF=0.250;AN=52;BaseQRankSum=2.891;DP=426;FS=0.000;HRun=2;HaplotypeScore=140.4115;InbreedingCoeff=-0.0261;MQ=50.25;MQ0=75;MQRankSum=0.259;QD=0.11;ReadPosRankSum=1.149;VQSLOD=-0.6264;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:9:4.26:0,4,16	0/0:4,0:3:7.92:0,8,59	0/1:55,0:11:4.61:5,0,130	0/1:73,0:21:10.86:11,0,168	0/1:12,1:9:0:0,0,0	0/1:18,1:13:0.08:0,0,90	0/0:13,0:10:6.83:0,7,134	0/1:14,2:10:35.58:36,0,38	./.	0/1:22,0:18:11.30:11,0,152	0/0:15,0:13:11.30:0,11,99	0/0:5,0:4:2.89:0,3,39	0/0:8,1:8:4.49:0,4,22	0/0:3,1:2:0:0,0,0	1/1:4,0:2:0.47:1,0,0	0/0:8,1:7:7.09:0,7,39	0/1:21,2:22:39.60:40,0,78	0/0:8,0:7:15.03:0,15,177	0/0:15,0:7:5.65:0,6,171	1/1:6,0:6:0.25:12,0,0	0/0:14,0:5:6.02:0,6,78	0/1:11,1:9:0.84:1,0,10	0/0:13,0:10:11.75:0,12,43	0/0:8,0:8:0.87:0,1,3	0/0:16,1:12:5.50:0,5,29	0/1:24,1:18:26.08:26,0,222	0/0:6,0:6:15.05:0,15,195	./.
chr10	2489410	.	TCTC	T	1193.29	PASS	AB=0.980;AC=19;AF=0.365;AN=52;BaseQRankSum=7.643;DP=438;FS=21.888;HRun=0;HaplotypeScore=128.9753;InbreedingCoeff=0.0324;MQ=51.50;MQ0=76;MQRankSum=-2.870;QD=5.47;ReadPosRankSum=4.073;VQSLOD=1.2241;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:16,0:9:29.06:29,0,55	0/0:4,0:3:5.85:0,6,58	0/0:59,0:14:21.69:0,22,359	0/0:78,0:22:2.86:0,3,380	./.	1/1:15,3:12:24.37:213,24,0	0/1:13,0:10:35.28:35,0,169	1/1:14,0:7:7.71:86,8,0	0/0:1,0:1:3.01:0,3,40	0/1:22,0:18:99:208,0,135	0/1:14,0:12:32.02:32,0,55	0/0:5,0:4:3.01:0,3,59	0/0:11,0:10:8.34:0,8,96	0/0:3,1:2:0:0,0,0	0/0:4,0:2:0.36:0,0,0	0/1:8,1:7:8.57:70,0,9	0/1:21,2:22:12.61:254,0,13	0/0:9,0:8:16.19:0,16,214	0/1:15,0:7:11.40:11,0,189	1/1:6,0:6:3:24,3,0	0/0:16,0:6:8.99:0,9,138	1/1:12,1:10:6.42:109,6,0	0/1:13,0:10:9.06:43,0,9	0/0:8,0:8:3.49:0,3,21	1/1:16,1:13:0.65:93,1,0	0/1:22,0:17:99:135,0,160	0/0:6,0:6:18.05:0,18,308	./.
chr10	2489413	.	C	CCT	1031	PASS	AB=0.980;AC=21;AF=0.404;AN=52;BaseQRankSum=9.465;DP=460;FS=32.453;HRun=0;HaplotypeScore=134.5137;InbreedingCoeff=-0.0405;MQ=55.32;MQ0=81;MQRankSum=-4.534;QD=4.37;ReadPosRankSum=4.395;VQSLOD=1.4610;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:15,0:8:22.04:22,0,32	0/1:4,0:3:22.35:22,0,32	0/0:68,0:16:27.89:0,28,290	0/0:90,0:26:18.66:0,19,355	./.	1/1:17,0:11:19.88:131,20,0	0/1:13,0:10:44.56:45,0,96	1/1:16,0:8:2.43:48,2,0	0/0:2,0:2:6.02:0,6,77	0/1:23,0:19:99:134,0,142	0/1:11,1:10:57.91:58,0,61	0/0:6,0:5:3.01:0,3,40	0/1:11,1:11:2.20:2,0,111	0/1:5,0:3:0:0,0,0	0/1:4,0:2:0.17:0,0,0	0/1:11,0:9:28.53:29,0,87	1/1:17,2:18:1.92:219,2,0	0/0:8,0:7:13.28:0,13,157	0/1:15,0:8:38.72:39,0,125	0/0:6,1:7:4.35:0,4,43	0/0:16,0:6:8.99:0,9,100	0/1:13,1:11:6.70:84,0,7	1/1:13,0:10:12.98:107,13,0	0/0:11,0:11:6.84:0,7,45	0/1:19,0:14:14.32:124,0,14	0/1:23,1:17:77.14:119,0,77	0/0:6,0:6:17.79:0,18,208	./.
chr10	2489414	.	C	CTG	1079.22	PASS	AB=0.970;AC=16;AF=0.308;AN=52;BaseQRankSum=7.808;DP=477;FS=19.402;HRun=0;HaplotypeScore=135.8766;InbreedingCoeff=-0.0843;MQ=54.91;MQ0=80;MQRankSum=-2.868;QD=5.09;ReadPosRankSum=3.439;VQSLOD=1.8940;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:16,1:10:38.28:38,0,54	0/1:4,0:3:35.12:35,0,52	0/0:67,0:16:27.42:0,27,336	0/0:92,0:26:22.77:0,23,425	./.	1/1:14,3:11:18.20:197,18,0	0/1:13,0:10:1.64:2,0,130	0/1:16,0:8:44.73:48,0,45	0/0:2,0:2:6.02:0,6,92	0/1:24,0:20:99:159,0,229	0/1:11,1:10:30.87:31,0,101	0/0:6,0:5:6.01:0,6,71	0/0:11,1:11:13.57:0,14,188	0/0:5,0:3:2.76:0,3,25	0/1:4,0:2:0.17:0,0,0	0/1:11,1:10:31.16:31,0,105	0/1:21,1:21:51.91:194,0,52	0/0:10,0:9:14.88:0,15,188	0/0:14,0:7:8.76:0,9,188	0/0:8,0:8:5.72:0,6,60	0/0:16,0:7:9.03:0,9,130	0/1:14,1:12:24.16:130,0,24	1/1:13,0:10:12.66:106,13,0	0/0:12,0:12:11.01:0,11,106	0/1:19,0:14:46.94:163,0,47	0/1:23,1:17:95.95:96,0,180	0/0:6,0:6:17.80:0,18,241	./.
chr10	2489417	.	TCTC	T	926.07	PASS	AB=0.971;AC=14;AF=0.259;AN=54;BaseQRankSum=10.221;DP=499;FS=41.465;HRun=0;HaplotypeScore=134.7764;InbreedingCoeff=-0.2112;MQ=57.92;MQ0=81;MQRankSum=-5.197;QD=4.54;ReadPosRankSum=6.027;VQSLOD=1.0592;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:17,1:11:36.57:37,0,139	0/1:4,0:3:4.53:5,0,103	0/0:76,0:18:30.64:0,31,575	0/0:101,0:29:38.85:0,39,667	0/0:9,1:7:3.01:0,3,40	1/1:15,1:11:8.30:151,8,0	0/0:14,0:11:8.81:0,9,275	0/0:17,0:9:4.24:0,4,151	0/0:2,0:2:6.02:0,6,118	0/1:22,0:19:99:128,0,458	0/1:13,0:11:33.54:34,0,107	0/0:5,0:4:6.02:0,6,118	0/0:12,0:11:21.53:0,22,321	0/0:4,1:3:3.01:0,3,60	0/0:4,0:2:0.47:0,0,1	0/1:10,1:9:46.69:47,0,171	0/1:23,0:22:99:125,0,144	0/0:11,0:10:19.31:0,19,334	0/1:14,1:7:48.23:48,0,198	0/1:8,0:8:8.41:8,0,110	0/0:18,0:9:21.07:0,21,366	0/1:15,1:13:86.86:91,0,87	0/1:13,0:10:48.59:65,0,49	0/0:13,0:13:13.55:0,14,202	0/1:18,1:14:47.23:158,0,47	0/1:25,1:19:99:179,0,236	0/0:6,0:6:17.27:0,17,233	./.
chr10	2489421	.	C	CTG	940.43	PASS	AB=0.960;AC=14;AF=0.259;AN=54;BaseQRankSum=8.776;DP=512;FS=28.504;HRun=0;HaplotypeScore=138.5761;InbreedingCoeff=-0.1987;MQ=62.13;MQ0=73;MQRankSum=-4.684;QD=4.75;ReadPosRankSum=3.663;VQSLOD=1.1777;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:14,1:12:41.47:41,0,156	0/1:4,0:3:23.85:24,0,82	0/0:92,0:23:42.84:0,43,552	0/0:112,0:34:25.09:0,25,467	0/0:8,0:7:3.01:0,3,46	1/1:11,2:11:10.71:213,11,0	0/1:14,0:12:19.80:20,0,204	0/0:14,0:8:15.77:0,16,225	0/0:2,0:2:6.02:0,6,92	0/1:18,2:17:99:174,0,377	0/1:12,1:11:28.11:28,0,117	0/0:6,0:5:12.03:0,12,162	0/0:12,0:11:16.50:0,17,248	0/0:5,0:3:2.78:0,3,46	0/0:3,0:1:0:0,0,0	0/1:11,0:10:18.81:19,0,165	0/1:23,0:23:38.88:39,0,214	0/0:11,0:10:21.07:0,21,306	0/1:13,1:9:8.13:8,0,175	0/0:7,0:7:7.44:0,7,96	0/0:20,0:11:24.08:0,24,367	0/1:14,1:13:77.15:111,0,77	0/1:9,0:8:27.05:114,0,27	0/0:15,0:15:15.94:0,16,214	0/1:17,2:14:56.05:210,0,56	0/1:27,1:22:90.03:90,0,287	0/0:6,0:6:15.05:0,15,220	./.
chr10	2489428	.	C	CTG	766.17	PASS	AB=0.927;AC=12;AF=0.222;AN=54;BaseQRankSum=9.108;DP=534;FS=21.174;HRun=0;HaplotypeScore=139.2373;InbreedingCoeff=-0.1219;MQ=67.73;MQ0=57;MQRankSum=-5.724;QD=4.73;ReadPosRankSum=2.438;VQSLOD=1.7971;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:15,0:15:17.86:18,0,374	0/1:4,0:4:25.42:25,0,123	0/0:105,0:31:59.36:0,59,751	0/0:117,0:38:39.12:0,39,595	0/0:6,1:8:6.02:0,6,91	1/1:11,1:10:17.84:168,18,0	0/1:15,0:13:38.94:39,0,252	0/0:12,0:8:17.92:0,18,254	0/0:4,0:4:9.03:0,9,138	0/1:11,3:16:99:200,0,370	0/1:11,0:11:15.96:16,0,102	0/0:6,0:6:12.04:0,12,184	0/0:15,0:14:19.91:0,20,309	0/0:5,0:4:2.78:0,3,46	0/0:6,0:5:6.01:0,6,71	0/0:15,0:14:18.95:0,19,316	0/1:21,1:22:47.69:48,0,521	0/0:15,0:14:27.07:0,27,372	0/0:13,0:8:8.61:0,9,166	0/0:8,0:8:11.91:0,12,182	0/0:17,0:11:27.09:0,27,412	0/1:13,1:14:67.62:68,0,111	0/1:4,2:8:33.70:101,0,34	0/0:16,0:16:24.08:0,24,346	0/1:10,4:15:99:182,0,105	0/1:26,0:23:54.38:54,0,389	0/0:7,0:7:18.06:0,18,254	./.
chr10	2489429	.	TCG	T	139.28	PASS	AB=0.949;AC=11;AF=0.196;AN=56;BaseQRankSum=8.879;DP=528;FS=25.633;HRun=0;HaplotypeScore=131.3380;InbreedingCoeff=-0.0915;MQ=68.13;MQ0=53;MQRankSum=-4.414;QD=0.93;ReadPosRankSum=1.669;VQSLOD=0.9415;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:22.25:0,22,402	0/0:4,0:4:5.89:0,6,142	0/0:105,0:32:23.99:0,24,717	0/0:116,0:38:50.36:0,50,703	0/0:7,1:8:6.02:0,6,116	1/1:12,0:10:5.66:36,6,0	0/1:14,0:13:7.24:7,0,232	0/0:12,0:8:20.98:0,21,297	0/0:4,0:4:12.04:0,12,216	0/1:15,1:16:53.02:53,0,441	0/1:10,2:11:19.17:19,0,148	0/0:6,0:6:12.04:0,12,222	0/0:15,0:14:29.53:0,30,446	0/0:5,0:4:6.02:0,6,101	0/0:6,0:5:9.03:0,9,156	0/0:14,0:13:25.32:0,25,382	0/1:19,2:21:13.22:13,0,361	0/0:15,0:14:24.08:0,24,457	0/1:12,0:8:17.95:18,0,162	0/0:7,1:8:14.92:0,15,275	0/0:16,0:11:27.09:0,27,495	0/1:13,1:13:6.99:7,0,126	0/1:8,0:8:32.66:33,0,87	0/0:16,0:16:24.07:0,24,360	0/1:15,0:15:33.55:34,0,135	0/1:22,3:23:61.66:62,0,454	0/0:7,0:7:18.03:0,18,289	0/0:1,0:1:3.01:0,3,40
chr10	2491334	.	CTCTCTCTG	C	367.32	PASS	AB=1.000;AC=19;AF=0.352;AN=54;BaseQRankSum=-0.910;DP=627;FS=10.886;HRun=0;HaplotypeScore=119.6059;InbreedingCoeff=-0.2122;MQ=38.75;MQ0=96;MQRankSum=0.712;QD=0.91;ReadPosRankSum=-3.823;VQSLOD=0.3728;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	0/0:10,0:8:2.99:0,3,25	1/1:4,0:1:1.25:3,1,0	0/1:3,0:1:0:0,0,0	1/1:21,0:19:2.68:11,3,0	0/1:26,0:23:32.89:46,0,33	0/1:38,0:31:1.13:84,0,1	0/1:43,0:36:12.81:13,0,61	0/0:23,0:20:14.11:0,14,175	0/0:19,0:18:9.13:0,9,426	0/0:18,0:15:2.68:0,3,11	0/1:22,0:22:7.28:7,0,341	0/1:20,0:18:22.06:22,0,265	0/0:18,0:17:14.52:0,15,199	0/0:25,0:22:0.56:0,1,181	0/1:29,0:23:80.21:80,0,252	0/1:32,0:21:3.95:78,0,4	0/1:23,0:17:1.68:2,0,211	0/1:17,0:16:29.16:29,0,92	0/1:20,0:16:17.50:17,0,19	0/1:27,0:14:30.93:31,0,43	0/0:15,0:14:0.47:0,0,1	0/0:16,0:14:0.47:0,0,1	0/1:28,0:22:29.52:44,0,30	0/1:20,0:16:13.03:13,0,23	0/1:30,0:20:19.96:20,0,322	0/0:26,0:23:14.82:0,15,241	0/0:17,0:9:12.05:0,12,145
chr10	2491340	.	CTG	C	510.85	PASS	AB=1.000;AC=24;AF=0.480;AN=50;BaseQRankSum=1.015;DP=591;FS=8.308;HRun=0;HaplotypeScore=85.8815;InbreedingCoeff=-0.4861;MQ=38.33;MQ0=97;MQRankSum=1.301;QD=1.01;ReadPosRankSum=-1.081;VQSLOD=0.7815;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	0/1:9,0:7:18.94:19,0,19	./.	./.	0/1:19,0:17:7.32:25,0,7	0/1:25,0:23:41.17:41,0,59	0/1:36,0:29:12.10:85,0,12	0/1:40,0:32:7.85:8,0,90	0/0:18,0:15:10.46:0,10,84	0/1:17,0:16:2.84:3,0,201	1/1:13,5:15:7.87:50,8,0	0/1:21,0:21:19.04:19,0,184	0/1:16,0:14:18.34:18,0,134	0/0:13,5:17:17.45:0,17,135	0/1:26,0:23:2.57:3,0,125	0/1:28,0:22:78.63:79,0,111	0/1:32,0:21:1.34:93,0,1	0/1:20,0:14:18.62:19,0,84	0/1:17,0:16:37.96:38,0,79	0/1:20,0:16:15.02:15,0,34	0/1:27,0:13:17.59:31,0,18	1/1:15,0:14:2.86:25,3,0	0/1:16,0:13:4.35:4,0,11	0/1:27,0:21:29.52:44,0,30	0/1:19,0:15:13.50:14,0,23	0/1:29,0:19:15.43:15,0,92	0/1:27,0:24:5.62:6,0,105	0/0:16,0:8:12.17:0,12,98
chr10	2491342	.	GTC	G	376.65	PASS	AB=1.000;AC=9;AF=0.180;AN=50;BaseQRankSum=4.720;DP=555;FS=0.786;HRun=0;HaplotypeScore=85.5484;InbreedingCoeff=0.3098;MQ=37.55;MQ0=99;MQRankSum=-1.841;QD=2.67;ReadPosRankSum=1.982;VQSLOD=1.7544;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:7,0:5:3.01:0,3,45	./.	./.	0/0:17,0:15:5.85:0,6,43	0/0:20,0:18:6.02:0,6,129	0/0:34,0:27:3.82:0,4,37	1/1:22,15:30:43.83:280,44,0	0/0:20,0:17:14.65:0,15,146	0/0:17,0:16:31.02:0,31,202	0/1:17,0:14:1.07:13,0,1	0/0:18,0:17:4.63:0,5,80	0/1:13,0:11:11.32:11,0,112	0/0:18,0:17:14.33:0,14,124	0/0:22,0:19:23.65:0,24,249	0/0:28,0:22:16.37:0,16,200	0/0:32,0:21:2.74:0,3,13	0/0:18,0:12:7.96:0,8,48	0/0:15,0:14:7.18:0,7,67	0/0:16,0:12:3.48:0,3,42	0/0:30,0:16:7.50:0,8,53	0/0:15,0:14:0:0,0,0	0/0:11,2:10:5.50:0,6,47	0/0:22,0:16:2.55:0,3,14	0/0:17,0:13:2.56:0,3,57	0/1:31,0:20:10.13:150,0,10	1/1:27,0:24:4.33:35,4,0	1/1:16,0:8:2.90:16,3,0
chr10	2491366	.	CTCTGTG	C	1269.32	PASS	AB=1.000;AC=12;AF=0.231;AN=52;BaseQRankSum=4.590;DP=566;FS=2.142;HRun=0;HaplotypeScore=108.0076;InbreedingCoeff=0.6262;MQ=40.47;MQ0=93;MQRankSum=-2.585;QD=7.29;ReadPosRankSum=-3.142;VQSLOD=0.7845;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:33,0:26:5.80:64,6,0	0/0:7,0:5:7.55:0,8,167	./.	./.	0/0:16,0:16:18.06:0,18,314	0/0:23,0:21:30.84:0,31,691	0/0:26,0:22:22.72:0,23,375	1/1:33,0:29:55.06:401,55,0	0/0:22,0:18:26.82:0,27,530	0/0:28,0:26:56.66:0,57,793	0/1:20,0:17:41.82:42,0,244	0/0:16,0:15:26.83:0,27,389	0/0:12,0:11:20.53:0,21,319	0/0:17,0:16:23.36:0,23,411	0/0:24,0:21:35.90:0,36,728	0/0:25,0:20:31.05:0,31,644	0/0:29,0:19:2.87:0,3,16	0/0:17,0:10:11.96:0,12,190	0/0:13,0:12:24:0,24,323	0/0:18,0:14:15.13:0,15,266	0/0:40,0:26:27.23:0,27,380	0/0:18,0:16:0.23:0,0,169	0/1:10,0:7:26.73:27,0,145	0/0:25,0:17:26.96:0,27,348	0/0:16,0:12:15.03:0,15,264	1/1:32,0:21:54.86:545,55,0	1/1:8,20:25:5.05:61,5,0	1/1:18,0:10:20.96:292,21,0
chr10	2495404	.	T	TTC	23382.40	PASS	AB=0.942;AC=54;AF=0.964;AN=56;BaseQRankSum=-4.755;DP=568;FS=0.000;HRun=0;HaplotypeScore=183.7144;InbreedingCoeff=-0.0390;MQ=78.56;MQ0=0;MQRankSum=-7.951;QD=41.17;ReadPosRankSum=4.573;VQSLOD=5.2116;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:24,5:29:30.09:421,30,0	1/1:5,7:12:36.09:500,36,0	0/1:14,1:15:44.52:45,0,181	0/1:17,1:18:77.98:78,0,222	1/1:29,4:33:98.13:1707,98,0	1/1:21,7:28:78.25:1342,78,0	1/1:1,7:8:21.01:234,21,0	1/1:1,19:24:60.15:735,60,0	1/1:13,7:20:60.18:959,60,0	1/1:16,5:21:60.20:1057,60,0	1/1:19,3:22:66.19:1142,66,0	1/1:9,5:14:42.13:663,42,0	1/1:12,13:25:72.04:976,72,0	1/1:18,5:24:68.81:1159,69,0	1/1:22,4:26:77.92:1364,78,0	1/1:14,10:24:72.22:1128,72,0	1/1:5,7:12:29.97:338,30,0	1/1:5,2:7:18.06:292,18,0	1/1:12,7:19:54.16:911,54,0	1/1:13,4:17:51.16:847,51,0	1/1:9,1:10:24.08:413,24,0	1/1:16,5:21:63.19:1068,63,0	1/1:13,10:23:63.18:998,63,0	1/1:9,3:12:18.53:308,19,0	1/1:20,10:30:84.23:1306,84,0	1/1:18,13:31:93.29:1487,93,0	1/1:27,11:38:99:1680,99,0	1/1:5,0:5:12.04:227,12,0
chr10	2495407	.	TAG	T	14338.60	PASS	AB=1.000;AC=53;AF=0.946;AN=56;BaseQRankSum=4.008;DP=561;FS=1.743;HRun=0;HaplotypeScore=214.8271;InbreedingCoeff=0.7892;MQ=76.68;MQ0=0;MQRankSum=-6.891;QD=26.31;ReadPosRankSum=4.283;VQSLOD=5.7237;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:23,5:28:26.30:228,26,0	1/1:5,7:12:34.33:300,34,0	0/1:14,0:14:0.74:1,0,24	0/0:16,0:16:31.57:0,32,176	1/1:29,4:33:84.38:972,84,0	1/1:21,6:27:71.40:799,71,0	1/1:1,5:6:14.20:70,14,0	1/1:4,19:23:68.29:511,68,0	1/1:14,7:21:62.01:668,62,0	1/1:19,5:24:68.85:821,69,0	1/1:18,3:21:50.15:589,50,0	1/1:8,5:13:38.20:383,38,0	1/1:12,13:25:52.59:581,53,0	1/1:20,5:25:58.71:690,59,0	1/1:21,4:25:67.27:842,67,0	1/1:14,10:24:70.88:726,71,0	1/1:5,7:12:27.50:189,28,0	1/1:4,2:6:11.95:123,12,0	1/1:12,7:19:54.03:647,54,0	1/1:14,4:18:47.27:534,47,0	1/1:10,0:10:20.85:234,21,0	1/1:16,5:21:62.04:716,62,0	1/1:14,9:23:55.17:520,55,0	1/1:11,3:14:23.73:259,24,0	1/1:19,10:29:79.24:829,79,0	1/1:18,13:31:89.51:957,90,0	1/1:25,11:36:80.21:989,80,0	1/1:5,0:5:12.04:160,12,0
chr10	2497840	.	G	GGTGAGA	1092.87	PASS	AB=0.627;AC=1;AF=0.018;AN=56;BaseQRankSum=1.296;DP=631;FS=5.133;HRun=0;HaplotypeScore=137.4982;InbreedingCoeff=-0.0170;MQ=84.45;MQ0=0;MQRankSum=-3.346;QD=29.54;ReadPosRankSum=-1.026;VQSLOD=2.9088;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,102,2125	0/0:4,0:4:12.04:0,12,262	0/0:32,0:31:45.04:0,45,904	0/0:35,0:33:15.15:0,15,879	0/0:6,0:6:15.05:0,15,327	0/0:13,0:13:21.07:0,21,454	0/0:20,0:20:54.18:0,54,1135	0/0:25,0:25:57.15:0,57,1086	0/0:29,0:29:72.24:0,72,1515	0/0:11,0:11:21.07:0,21,458	0/0:10,0:10:17.27:0,17,334	0/0:31,0:31:78.24:0,78,1584	0/0:16,0:16:33.10:0,33,680	0/0:29,0:29:75.24:0,75,1558	0/0:32,0:32:84.27:0,84,1750	0/0:26,0:26:69.13:0,69,1288	0/1:15,18:37:26.30:1167,0,26	0/0:29,0:29:75.16:0,75,1376	0/0:19,0:18:51.02:0,51,782	0/0:17,0:17:45.15:0,45,953	0/0:35,0:35:84.23:0,84,1695	0/0:16,0:16:42.14:0,42,911	0/0:11,0:11:27.09:0,27,585	0/0:26,0:26:60.15:0,60,1203	0/0:24,0:24:63.22:0,63,1370	0/0:19,0:19:54.18:0,54,1124	0/0:25,0:25:60.16:0,60,1142	0/0:15,0:15:42.04:0,42,825
chr10	2499213	.	G	GA	491.77	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-6.086;DP=579;FS=0.000;HRun=10;HaplotypeScore=56.1404;InbreedingCoeff=0.8777;MQ=62.03;MQ0=0;MQRankSum=-0.274;QD=19.67;ReadPosRankSum=-0.528;VQSLOD=4.1379;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,21:25:38.36:586,38,0	0/0:9,0:9:23.94:0,24,193	0/0:10,0:7:11.99:0,12,99	0/0:14,0:12:16.65:0,17,145	0/0:19,0:19:50.92:0,51,415	0/0:26,0:26:68.88:0,69,563	0/0:13,0:13:32.95:0,33,271	0/0:31,0:31:68.87:0,69,562	0/0:15,1:16:6.93:0,7,260	0/0:22,1:23:27.92:0,28,436	0/0:20,0:22:58:0,58,455	0/0:25,0:26:73.93:0,74,594	0/0:26,0:26:68.90:0,69,566	0/0:15,0:15:38.94:0,39,320	0/0:20,0:20:56.93:0,57,468	0/0:15,0:15:41.93:0,42,342	0/0:23,0:23:47.90:0,48,391	0/0:24,0:26:61:0,61,480	0/0:18,0:17:38.90:0,39,314	0/0:28,0:28:77.88:0,78,640	0/0:13,0:13:26.94:0,27,222	0/0:29,0:32:87.97:0,88,701	0/0:23,0:24:68.41:0,68,545	0/0:25,0:25:71.90:0,72,591	0/0:15,0:15:38.94:0,39,320	0/0:19,0:19:47.93:0,48,394	0/0:35,0:35:86.85:0,87,708	0/0:10,0:10:20.95:0,21,172
chr10	2500104	.	ACTCCTCAGGGCAGGC	A	1996.22	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.413;DP=500;FS=0.000;HRun=0;HaplotypeScore=200.8365;InbreedingCoeff=0.9422;MQ=76.66;MQ0=0;MQRankSum=-6.685;QD=79.85;ReadPosRankSum=1.324;VQSLOD=3.4013;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,18:25:48.16:2091,48,0	0/0:15,0:15:45.15:0,45,2967	0/0:20,0:20:54.18:0,54,2695	0/0:12,0:11:22.58:0,23,918	0/0:13,0:13:39.13:0,39,2887	0/0:15,0:15:45.15:0,45,3296	0/0:19,0:19:57.20:0,57,3848	0/0:19,0:19:45.12:0,45,2332	0/0:17,0:17:51.18:0,51,3567	0/0:15,0:15:42.14:0,42,2409	0/0:18,0:17:48.16:0,48,3395	0/0:25,0:25:75.26:0,75,5412	0/0:21,0:21:60.21:0,60,3942	0/0:20,0:20:57.20:0,57,3985	0/0:23,0:23:69.24:0,69,4583	0/0:13,0:13:36.12:0,36,2478	0/0:31,0:31:90.31:0,90,6442	0/0:14,0:14:42.14:0,42,3051	0/0:28,0:28:81.28:0,81,4945	0/0:14,0:14:42.14:0,42,2582	0/0:13,0:13:39.13:0,39,2695	0/0:19,0:19:57.20:0,57,3984	0/0:22,0:22:66.23:0,66,4449	0/0:21,0:21:63.22:0,63,4471	0/0:12,0:12:36.12:0,36,2389	0/0:19,0:19:57.20:0,57,3582	0/0:13,0:13:39.13:0,39,2834	0/0:3,0:3:9.03:0,9,674
chr10	2500208	.	T	TG	948.48	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.924;DP=628;FS=0.780;HRun=1;HaplotypeScore=71.0184;InbreedingCoeff=0.9805;MQ=67.29;MQ0=3;MQRankSum=-2.684;QD=32.71;ReadPosRankSum=1.626;VQSLOD=3.4044;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,27:29:66.90:1043,67,0	0/0:7,0:7:21.07:0,21,272	0/0:35,0:34:93.07:0,93,1089	0/0:30,0:27:75.20:0,75,900	0/0:21,0:21:60.19:0,60,779	0/0:17,0:17:51.15:0,51,647	0/0:17,0:17:48.14:0,48,607	0/0:38,0:38:99:0,111,1407	0/0:23,0:23:66.21:0,66,856	0/0:27,0:27:81.25:0,81,1027	0/0:23,0:23:69.22:0,69,896	0/0:28,0:28:84.27:0,84,1090	0/0:28,0:28:84.27:0,84,1090	0/0:22,0:22:66.21:0,66,856	0/0:20,0:20:51.16:0,51,650	0/0:16,0:16:45.13:0,45,570	0/0:29,0:29:87.19:0,87,1091	0/0:20,0:20:60.16:0,60,761	0/0:24,0:23:63.20:0,63,818	0/0:23,0:23:63.19:0,63,802	0/0:34,0:34:99:0,102,1324	0/0:14,0:14:42.14:0,42,545	0/0:17,0:17:51.17:0,51,661	0/0:16,0:16:48.16:0,48,623	0/0:17,0:17:51.16:0,51,649	0/0:23,0:23:66.21:0,66,846	0/0:25,0:24:75.23:0,75,958	0/0:5,0:5:15.05:0,15,195
chr10	2501140	.	CT	C	1623.35	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=9.471;DP=616;FS=2.874;HRun=1;HaplotypeScore=64.8601;InbreedingCoeff=0.9926;MQ=67.68;MQ0=1;MQRankSum=-1.642;QD=37.75;ReadPosRankSum=2.585;VQSLOD=4.2954;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,117,1808	0/0:7,0:7:21.07:0,21,336	0/0:28,0:25:72.24:0,72,1124	0/0:15,0:15:39.13:0,39,620	0/0:19,0:19:48.16:0,48,759	0/0:17,0:17:48.12:0,48,739	0/0:29,0:29:87.30:0,87,1382	0/0:34,0:32:84.29:0,84,1330	0/0:30,0:30:90.31:0,90,1426	0/0:16,0:16:45.15:0,45,713	0/0:11,0:11:27.09:0,27,431	0/0:20,0:20:60.20:0,60,948	0/0:19,0:19:57.18:0,57,879	0/0:26,0:26:78.25:0,78,1216	0/0:26,0:26:78.27:0,78,1239	0/0:28,0:28:84.29:0,84,1343	1/1:0,43:43:99:1718,123,0	0/0:31,0:31:87.23:0,87,1338	0/0:14,0:14:42.14:0,42,658	0/0:18,0:18:54.17:0,54,840	0/0:27,0:27:78.27:0,78,1235	0/0:19,0:19:57.14:0,57,872	0/0:14,0:14:39.13:0,39,614	0/0:17,0:17:51.17:0,51,815	0/0:12,0:12:36.12:0,36,576	0/0:14,0:14:42.12:0,42,625	0/0:32,0:32:96.33:0,96,1527	0/0:8,0:8:24.08:0,24,384
chr10	2503634	.	TG	T	4187.57	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=17.340;DP=649;FS=1.533;HRun=8;HaplotypeScore=95.0781;InbreedingCoeff=0.9724;MQ=79.67;MQ0=0;MQRankSum=-2.651;QD=24.93;ReadPosRankSum=1.318;VQSLOD=4.0042;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,35:38:96.15:927,96,0	0/0:7,0:7:21.06:0,21,254	0/0:13,0:13:24.06:0,24,272	0/0:25,0:25:47.88:0,48,519	0/0:14,1:15:13.29:0,13,442	0/0:29,0:29:78.24:0,78,942	0/0:25,0:25:66.20:0,66,797	1/1:6,22:28:63.04:599,63,0	0/0:24,0:24:60.17:0,60,713	0/0:22,1:23:31.20:0,31,656	0/0:15,0:15:39.12:0,39,470	0/0:23,0:24:65.96:0,66,755	0/0:29,0:29:81.23:0,81,964	0/0:29,0:29:87.25:0,87,1031	0/0:36,0:36:99:0,102,1212	0/0:27,1:28:46.26:0,46,841	1/1:1,37:38:99:1043,108,0	0/0:23,0:23:63.19:0,63,761	0/0:16,0:16:42.13:0,42,505	0/0:20,0:20:57.16:0,57,675	0/0:22,0:22:66.19:0,66,782	0/0:18,0:18:54.17:0,54,651	0/0:17,0:17:48.15:0,48,580	0/0:23,0:23:63.19:0,63,761	0/0:20,0:20:48.14:0,48,570	1/1:7,20:27:63.08:605,63,0	1/1:1,34:35:99:956,99,0	1/1:0,2:2:6.01:58,6,0
chr10	2505747	.	CAAAA	C	2837.24	PASS	AB=0.548;AC=11;AF=0.196;AN=56;BaseQRankSum=6.481;DP=464;FS=6.505;HRun=14;HaplotypeScore=88.5959;InbreedingCoeff=0.8887;MQ=66.26;MQ0=1;MQRankSum=-5.248;QD=23.84;ReadPosRankSum=4.146;VQSLOD=2.7328;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,14:17:11.24:440,11,0	0/0:9,0:11:27.09:0,27,580	0/0:29,0:22:18.50:0,18,258	0/0:12,0:9:7.31:0,7,119	0/0:20,0:23:57.18:0,57,1147	0/0:18,0:18:48.16:0,48,1034	0/0:11,0:13:33.11:0,33,702	1/1:9,18:28:56.46:734,56,0	0/0:16,0:16:39.13:0,39,898	0/0:12,0:17:45.14:0,45,874	0/0:22,0:23:66.21:0,66,1366	0/0:7,0:7:12.04:0,12,268	0/0:7,0:7:9.03:0,9,199	0/0:9,0:10:15.05:0,15,303	0/0:4,0:17:48.07:0,48,629	0/0:9,0:9:18.06:0,18,411	0/1:4,1:23:0.95:28,0,1	0/0:21,0:24:66.22:0,66,1436	0/0:9,0:10:27.09:0,27,565	0/0:23,0:25:54.18:0,54,1119	0/0:5,0:7:18.06:0,18,348	0/0:16,0:17:48.08:0,48,1047	0/0:14,0:21:56.23:0,56,993	0/0:14,0:18:33.03:0,33,673	0/0:8,0:9:24.08:0,24,478	1/1:2,18:21:57.14:767,57,0	1/1:1,14:16:36.08:491,36,0	1/1:1,13:14:39.11:552,39,0
chr10	2505871	.	CGTGTGTGT	C	584.43	PASS	AB=1.000;AC=9;AF=0.180;AN=50;BaseQRankSum=3.939;DP=410;FS=4.393;HRun=0;HaplotypeScore=97.5416;InbreedingCoeff=0.5785;MQ=55.97;MQ0=7;MQRankSum=-3.966;QD=7.13;ReadPosRankSum=1.424;VQSLOD=1.5250;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:9,0:8:9:0,9,166	./.	./.	0/0:8,0:8:12.03:0,12,297	0/1:11,0:11:0.37:0,0,266	0/0:28,0:28:30.05:0,30,656	0/0:25,0:23:2.22:0,2,7	0/0:9,0:11:15.05:0,15,488	0/0:6,0:5:12.02:0,12,284	0/0:8,0:8:9.03:0,9,288	0/0:7,0:9:6.02:0,6,109	0/0:11,0:11:6:0,6,146	0/0:7,0:7:12.02:0,12,284	0/0:3,0:5:9.01:0,9,211	0/0:13,0:14:9.03:0,9,309	1/1:26,0:31:3.01:54,3,0	0/0:21,0:24:41.25:0,41,889	0/0:8,0:7:3.01:0,3,122	0/0:13,0:13:21.54:0,22,595	0/0:30,0:29:32.96:0,33,634	0/0:1,0:3:6.01:0,6,89	0/0:7,0:8:9.03:0,9,366	0/0:24,0:24:27.08:0,27,978	0/0:13,0:15:27.06:0,27,747	1/1:13,4:16:8.65:140,9,0	1/1:3,8:11:18.06:445,18,0	1/1:11,1:12:3.01:74,3,0
chr10	2507605	.	G	GA	1231.58	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=1.964;DP=533;FS=5.460;HRun=6;HaplotypeScore=51.0003;InbreedingCoeff=0.9744;MQ=70.98;MQ0=1;MQRankSum=-1.952;QD=30.04;ReadPosRankSum=1.287;VQSLOD=4.3027;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,24:25:69.22:863,69,0	0/0:8,0:8:21.04:0,21,214	0/0:16,0:16:19.77:0,20,179	0/0:10,0:8:17.58:0,18,183	0/0:29,0:29:78.16:0,78,788	0/0:19,0:19:54.12:0,54,551	0/0:18,0:18:45.09:0,45,458	0/0:39,0:39:87.17:0,87,882	0/0:17,0:17:48.11:0,48,490	0/0:26,0:26:66.14:0,66,668	0/0:24,0:24:63.14:0,63,643	0/0:15,0:15:39.09:0,39,398	0/0:29,0:29:81.18:0,81,826	0/0:24,0:24:66.13:0,66,666	0/0:23,0:23:66.15:0,66,673	0/0:16,0:16:48.11:0,48,489	1/1:0,16:16:39.12:491,39,0	0/0:17,0:18:45.10:0,45,459	0/0:10,0:10:21.04:0,21,214	0/0:27,0:27:75.14:0,75,755	0/0:5,0:5:15.03:0,15,153	0/0:21,0:21:54.12:0,54,551	0/0:20,0:20:48.10:0,48,489	0/0:7,0:7:18.04:0,18,184	0/0:16,0:16:45.10:0,45,459	0/0:26,0:26:66.13:0,66,668	0/0:22,0:22:66.15:0,66,673	0/0:7,0:7:21.05:0,21,214
chr10	2508823	.	AAAAAAAAG	A	1220.67	PASS	AB=0.586;AC=7;AF=0.125;AN=56;BaseQRankSum=3.215;DP=508;FS=6.155;HRun=0;HaplotypeScore=104.0042;InbreedingCoeff=0.6580;MQ=47.73;MQ0=29;MQRankSum=-4.282;QD=19.69;ReadPosRankSum=-1.154;VQSLOD=2.3792;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:33:45.01:0,45,1209	0/0:4,0:4:11.87:0,12,233	0/0:37,0:4:2.15:0,2,16	0/0:40,0:7:15.29:0,15,129	0/0:28,0:26:52.67:0,53,797	0/0:14,0:12:11.46:0,11,639	0/0:14,0:11:27.05:0,27,606	1/1:17,1:15:36.32:248,36,0	0/0:7,0:7:14.21:0,14,371	0/0:32,0:32:56.35:0,56,1196	0/0:14,0:14:4.23:0,4,513	0/0:18,0:17:29.26:0,29,527	0/0:7,0:7:16.70:0,17,328	0/0:13,0:12:28.94:0,29,470	0/0:20,0:18:33.11:0,33,920	0/0:17,0:17:24.95:0,25,576	0/0:43,0:41:86.90:0,87,2298	0/0:21,0:19:47.59:0,48,1147	0/0:21,0:19:47.80:0,48,763	0/0:11,0:11:25.06:0,25,450	0/0:7,0:7:8.90:0,9,176	0/0:7,0:6:8.37:0,8,219	0/0:15,0:15:17.47:0,17,615	0/0:8,0:5:5.64:0,6,121	0/0:14,0:14:29.81:0,30,536	1/1:7,13:19:48.18:623,48,0	0/1:5,12:17:13.85:295,0,14	1/1:0,7:7:9.03:196,9,0
chr10	2508824	.	A	AG	182.65	PASS	AB=0.779;AC=2;AF=0.036;AN=56;BaseQRankSum=-0.597;DP=512;FS=1.010;HRun=0;HaplotypeScore=60.1243;InbreedingCoeff=-0.0466;MQ=48.09;MQ0=28;MQRankSum=0.745;QD=2.47;ReadPosRankSum=4.011;VQSLOD=2.1506;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:7,25:33:33.96:256,0,34	0/0:4,0:4:11.93:0,12,92	0/0:37,0:4:2.99:0,3,25	0/1:40,0:7:5.53:6,0,77	0/0:28,0:26:68.13:0,68,530	0/0:14,0:12:32.30:0,32,286	0/0:15,0:12:26.84:0,27,215	0/0:18,0:16:38.37:0,38,266	0/0:7,0:7:17.93:0,18,145	0/0:32,0:32:90.17:0,90,738	0/0:14,0:14:32.76:0,33,262	0/0:18,0:17:36.89:0,37,273	0/0:8,0:8:13.70:0,14,115	0/0:13,0:12:32.26:0,32,234	0/0:20,0:18:32.97:0,33,291	0/0:18,0:18:47.71:0,48,393	0/0:42,0:40:96.79:0,97,850	0/0:21,0:19:48.97:0,49,394	0/0:21,0:19:55.45:0,55,474	0/0:13,0:13:32.83:0,33,259	0/0:6,0:6:10.85:0,11,82	0/0:7,0:6:14.90:0,15,119	0/0:14,0:14:33.33:0,33,234	0/0:8,0:5:9:0,9,78	0/0:16,0:16:32.66:0,33,256	0/0:20,0:19:46.68:0,47,296	0/0:17,0:17:17.54:0,18,108	0/0:7,0:7:8.63:0,9,45
chr10	2508831	.	G	GA	1051.41	PASS	AB=1.000;AC=10;AF=0.179;AN=56;BaseQRankSum=2.331;DP=538;FS=9.306;HRun=21;HaplotypeScore=66.2294;InbreedingCoeff=0.7534;MQ=54.45;MQ0=23;MQRankSum=-1.293;QD=7.10;ReadPosRankSum=-1.725;VQSLOD=1.0874;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:37:36.20:0,36,289	0/0:5,0:5:8.63:0,9,78	0/1:34,0:5:0.79:1,0,21	0/1:38,0:9:5.43:5,0,86	0/0:32,0:30:53.74:0,54,467	0/0:13,0:11:24.46:0,24,206	0/0:14,0:12:21.43:0,21,181	1/1:7,22:28:66.04:675,66,0	0/0:7,0:7:14.98:0,15,128	0/0:32,0:32:52.54:0,53,415	0/0:14,0:14:19.37:0,19,156	0/0:19,0:18:24.62:0,25,187	0/0:10,0:10:19.11:0,19,163	0/0:13,0:13:17.95:0,18,139	0/0:19,0:18:36.36:0,36,293	0/0:17,0:17:24.79:0,25,190	0/0:39,0:37:86.98:0,87,752	0/0:22,0:20:38.68:0,39,294	0/0:24,0:22:23.99:0,24,279	0/0:14,0:14:27.57:0,28,211	0/0:8,0:8:11.56:0,12,90	0/0:9,0:8:14.59:0,15,128	0/0:16,0:16:29.23:0,29,254	0/0:7,0:4:6:0,6,52	0/0:18,0:18:26.60:0,27,249	1/1:20,3:22:49.25:405,49,0	1/1:16,0:17:16.93:76,17,0	1/1:7,0:7:8.63:44,9,0
chr10	2509635	.	T	TCTTC	1094.47	PASS	AB=0.827;AC=6;AF=0.120;AN=50;BaseQRankSum=-2.599;DP=591;FS=6.064;HRun=0;HaplotypeScore=95.1264;InbreedingCoeff=0.6042;MQ=66.18;MQ0=1;MQRankSum=-0.544;QD=12.73;ReadPosRankSum=-3.457;VQSLOD=1.3713;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:31.96:0,32,320	0/0:14,0:14:15.04:0,15,209	./.	./.	0/0:35,0:35:57.14:0,57,829	0/0:24,0:24:30:0,30,359	0/0:11,0:11:12.01:0,12,124	./.	0/0:20,0:20:24.05:0,24,325	0/0:24,0:24:51.15:0,51,714	0/0:23,0:23:18.05:0,18,257	1/1:6,7:14:9.50:199,10,0	0/1:15,17:32:3.89:400,0,4	1/1:8,11:20:24.08:553,24,0	0/0:18,0:18:36.10:0,36,512	0/0:13,0:13:39.11:0,39,559	0/1:20,0:20:32.90:70,0,33	0/0:14,0:14:6.02:0,6,90	0/0:21,0:21:15.05:0,15,230	0/0:27,0:27:29.88:0,30,328	0/0:12,0:12:12.02:0,12,143	0/0:16,0:16:24.07:0,24,348	0/0:23,0:23:32.56:0,33,446	0/0:27,0:27:33.04:0,33,435	0/0:22,0:22:39.08:0,39,497	0/0:24,0:24:25.17:0,25,614	0/0:32,0:32:45.05:0,45,507	0/0:18,0:18:12.03:0,12,160
chr10	2509679	.	CCTTT	C	231.71	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.239;DP=592;FS=1.313;HRun=0;HaplotypeScore=96.0264;InbreedingCoeff=0.8997;MQ=59.29;MQ0=7;MQRankSum=-1.785;QD=7.24;ReadPosRankSum=1.159;VQSLOD=1.9748;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,25:32:21.02:324,21,0	0/0:11,0:11:33.05:0,33,504	0/0:13,0:7:17.42:0,17,132	0/0:7,0:5:8.12:0,8,89	0/0:47,0:47:99:0,126,1883	0/0:24,0:24:59.98:0,60,775	0/0:11,0:11:30:0,30,287	0/0:23,0:23:62.85:0,63,566	0/0:20,0:20:53.98:0,54,723	0/0:32,0:32:81.18:0,81,1431	0/0:21,0:21:60.10:0,60,873	0/0:16,0:16:30.03:0,30,380	0/0:27,0:27:45.06:0,45,654	0/0:20,0:20:45.11:0,45,765	0/0:15,0:15:36.11:0,36,804	0/0:19,0:19:51.12:0,51,963	0/0:19,0:19:39.80:0,40,301	0/0:17,0:17:44.93:0,45,474	0/0:19,0:16:44.96:0,45,624	0/0:26,0:26:13.26:0,13,711	0/0:13,0:13:32.99:0,33,399	0/0:16,0:15:42.03:0,42,749	0/0:29,0:29:75.06:0,75,1086	0/0:23,0:23:51.96:0,52,897	0/0:19,0:19:45.10:0,45,835	0/0:36,0:36:96.23:0,96,1583	0/0:26,0:26:66.04:0,66,973	0/0:11,0:11:24.01:0,24,296
chr10	2509968	.	T	TCAC	2626.03	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-8.511;DP=768;FS=9.077;HRun=0;HaplotypeScore=105.8551;InbreedingCoeff=0.9866;MQ=66.81;MQ0=7;MQRankSum=-1.001;QD=28.24;ReadPosRankSum=5.276;VQSLOD=3.4354;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,43:55:72.25:1453,72,0	0/0:11,0:11:18.06:0,18,260	0/0:38,0:27:29.83:0,30,360	0/0:29,0:25:28.20:0,28,455	0/0:23,0:23:57.18:0,57,794	0/0:28,0:28:69.22:0,69,983	0/0:43,0:43:96.12:0,96,1243	0/0:29,0:29:57.15:0,57,770	0/0:30,0:30:72.23:0,72,1020	0/0:22,0:22:48.16:0,48,691	0/0:16,0:16:39.11:0,39,516	0/0:32,0:32:69.21:0,69,977	0/0:34,0:34:78.24:0,78,1108	0/0:25,0:25:63.18:0,63,872	0/0:23,0:23:54.18:0,54,784	0/0:20,0:20:51.17:0,51,741	1/1:8,30:38:63.22:1295,63,0	0/0:23,0:23:60.20:0,60,870	0/0:26,0:23:35.99:0,36,451	0/0:20,0:20:51.10:0,51,668	0/0:50,0:50:93.25:0,93,1267	0/0:13,0:13:30.10:0,30,430	0/0:20,0:20:45.04:0,45,594	0/0:52,0:51:99:0,120,1736	0/0:13,0:13:33.11:0,33,475	0/0:30,0:30:69.22:0,69,971	0/0:19,0:19:45.14:0,45,626	0/0:5,0:5:15.05:0,15,216
chr10	2510967	.	AT	A	1033.78	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.072;DP=765;FS=1.322;HRun=6;HaplotypeScore=73.2648;InbreedingCoeff=0.9885;MQ=75.27;MQ0=0;MQRankSum=-0.406;QD=28.72;ReadPosRankSum=3.011;VQSLOD=4.3968;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:62,0:61:99:0,175,2271	0/0:16,0:16:45.15:0,45,591	0/0:15,0:15:27.26:0,27,375	0/0:14,0:14:19.09:0,19,340	0/0:29,0:29:81.25:0,81,1052	0/0:17,0:17:51.15:0,51,656	0/0:28,0:28:81.26:0,81,1065	0/0:36,0:36:99:0,99,1291	0/0:36,0:36:99:0,99,1303	0/0:42,0:42:99:0,120,1568	0/0:11,0:11:33.11:0,33,434	0/0:36,0:36:99:0,99,1290	0/0:32,0:32:96.29:0,96,1236	0/0:25,0:25:69.21:0,69,893	0/0:29,0:29:87.28:0,87,1143	0/0:33,0:33:93.30:0,93,1223	1/1:1,35:36:99:1129,105,0	0/0:19,0:19:57.19:0,57,749	0/0:20,0:20:51.15:0,51,650	0/0:23,0:23:63.20:0,63,819	0/0:38,0:38:99:0,102,1327	0/0:21,0:21:63.20:0,63,827	0/0:33,0:33:81.26:0,81,1061	0/0:29,0:29:81.26:0,81,1066	0/0:27,0:27:78.23:0,78,995	0/0:22,0:22:63.20:0,63,829	0/0:29,0:29:78.25:0,78,1026	0/0:7,0:7:21.07:0,21,276
chr10	2511932	.	T	TTA	4319.05	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-11.889;DP=552;FS=3.910;HRun=0;HaplotypeScore=60.5893;InbreedingCoeff=0.9781;MQ=74.41;MQ0=0;MQRankSum=1.016;QD=43.63;ReadPosRankSum=-0.183;VQSLOD=6.2853;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:72.23:0,72,937	0/0:7,0:7:18.06:0,18,233	0/0:15,0:15:18.59:0,19,329	0/0:7,0:7:8.92:0,9,94	0/0:34,0:34:93.30:0,93,1207	0/0:20,0:20:51.17:0,51,663	0/0:10,0:10:27.07:0,27,336	1/1:6,25:32:78.25:1301,78,0	0/0:18,0:18:42.12:0,42,531	0/0:27,0:27:69.21:0,69,874	0/0:29,0:29:78.24:0,78,1000	0/0:12,0:12:30.10:0,30,390	0/0:12,0:12:30.10:0,30,389	0/0:19,0:19:54.18:0,54,702	0/0:22,0:22:54.17:0,54,689	0/0:26,0:26:75.24:0,75,964	0/0:22,0:22:66.21:0,66,859	0/0:17,0:17:45.15:0,45,585	0/0:27,0:27:72.22:0,72,919	0/0:16,0:16:36.10:0,36,453	0/0:11,0:11:24.08:0,24,309	0/0:17,0:17:48.16:0,48,620	0/0:22,0:22:60.20:0,60,780	0/0:11,0:11:27.09:0,27,350	0/0:21,0:21:57.19:0,57,740	1/1:0,22:22:63.20:1044,63,0	1/1:4,24:28:72.25:1209,72,0	1/1:2,15:17:45.15:765,45,0
chr10	2515750	.	GT	G	509.19	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.770;DP=402;FS=5.243;HRun=9;HaplotypeScore=39.1282;InbreedingCoeff=0.7607;MQ=62.88;MQ0=3;MQRankSum=-1.571;QD=20.37;ReadPosRankSum=1.032;VQSLOD=3.8134;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:0,0:13:34.09:0,34,173	0/0:8,0:8:18.05:0,18,207	0/0:13,0:4:6.01:0,6,65	0/0:11,0:8:13.53:0,14,104	0/0:28,1:29:45.03:0,45,765	0/0:15,0:15:36.07:0,36,393	0/0:8,0:8:24.03:0,24,248	0/0:23,0:23:55.39:0,55,610	0/0:11,0:11:30.07:0,30,336	0/0:19,0:19:51.15:0,51,588	0/0:19,0:19:51.14:0,51,579	0/0:6,0:6:15.04:0,15,173	0/0:6,0:6:18.05:0,18,208	0/0:9,0:9:27.08:0,27,308	0/0:13,0:13:36.11:0,36,415	0/0:11,0:11:33.10:0,33,381	1/1:1,24:25:66.04:604,66,0	0/0:11,0:11:27.04:0,27,297	0/0:14,0:14:36.11:0,36,415	0/0:24,1:25:38.73:0,39,700	0/0:4,0:4:12.04:0,12,138	0/0:3,0:3:6.02:0,6,69	0/0:12,0:12:27.08:0,27,312	0/0:6,0:6:18.04:0,18,198	0/0:31,0:31:81.20:0,81,906	0/0:18,0:18:51.14:0,51,581	0/0:25,0:25:57.14:0,57,644	0/0:12,0:12:32.01:0,32,379
chr10	2516415	.	TTG	T	1173.11	PASS	AB=0.915;AC=10;AF=0.185;AN=54;BaseQRankSum=6.354;DP=624;FS=10.825;HRun=0;HaplotypeScore=82.7810;InbreedingCoeff=0.5865;MQ=60.24;MQ0=8;MQRankSum=0.036;QD=8.69;ReadPosRankSum=-0.662;VQSLOD=2.0001;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:33:54.14:0,54,774	0/1:9,1:10:10.12:10,0,298	./.	0/0:26,0:9:5.97:0,6,48	0/0:31,0:32:38.03:0,38,786	0/0:21,0:21:39.11:0,39,543	0/0:18,0:17:32.90:0,33,470	1/1:22,12:32:31.92:362,32,0	0/0:20,1:21:10.94:0,11,583	0/0:25,1:26:22.99:0,23,756	0/0:22,0:22:33.20:0,33,623	0/0:22,0:21:11.96:0,12,542	0/0:23,0:24:47.45:0,47,810	0/0:19,0:20:11.99:0,12,589	0/0:14,0:14:1.94:0,2,455	0/0:17,0:17:2.05:0,2,468	0/0:11,0:25:21.01:0,21,199	0/0:22,0:21:36.47:0,36,493	0/0:19,0:19:19.41:0,19,260	0/0:31,1:33:24.74:0,25,768	0/0:19,0:19:22.28:0,22,268	0/0:16,0:16:33.11:0,33,503	0/1:21,2:23:20.23:20,0,594	0/0:20,1:21:7.47:0,7,562	0/0:28,1:29:19.15:0,19,827	1/1:15,16:32:50.97:548,51,0	1/1:7,12:20:32.93:354,33,0	1/1:13,3:16:3:34,3,0
chr10	2517722	.	AT	A	368.67	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.963;DP=472;FS=2.126;HRun=8;HaplotypeScore=44.3218;InbreedingCoeff=0.9624;MQ=74.58;MQ0=0;MQRankSum=-0.811;QD=18.43;ReadPosRankSum=1.563;VQSLOD=3.2595;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:36.11:0,36,435	0/0:10,0:10:30.08:0,30,350	0/0:22,0:15:35.95:0,36,385	0/0:16,0:14:24.90:0,25,259	0/0:31,0:31:84.25:0,84,1003	0/0:22,0:22:63.19:0,63,761	0/0:14,0:14:42.13:0,42,507	0/0:39,0:39:99:0,108,1265	0/0:8,0:8:24.07:0,24,290	0/0:14,0:14:42.12:0,42,498	0/0:26,0:26:69.20:0,69,822	0/0:12,0:12:30.08:0,30,351	0/0:15,0:15:42.13:0,42,507	0/0:10,0:10:27.08:0,27,326	0/0:13,0:13:36.11:0,36,435	0/0:16,0:16:48.12:0,48,558	1/1:4,16:20:48.07:464,48,0	0/0:14,0:14:36.11:0,36,435	0/0:23,0:23:48.12:0,48,565	0/0:27,0:27:78.24:0,78,942	0/0:6,0:6:15.05:0,15,181	0/0:15,0:15:39.10:0,39,452	0/0:17,0:17:45.14:0,45,544	0/0:10,0:10:30.08:0,30,350	0/0:14,0:14:30.07:0,30,349	0/0:19,0:21:62.93:0,63,718	0/0:18,0:18:48.15:0,48,580	0/0:5,0:5:15.05:0,15,181
chr10	2532402	.	AGT	A	424.04	PASS	AB=0.976;AC=17;AF=0.315;AN=54;BaseQRankSum=4.447;DP=528;FS=7.834;HRun=0;HaplotypeScore=75.3848;InbreedingCoeff=-0.0073;MQ=69.66;MQ0=14;MQRankSum=-0.600;QD=1.64;ReadPosRankSum=2.070;VQSLOD=0.7898;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:12,0:18:0.05:1,0,0	1/1:8,1:9:6:58,6,0	./.	0/0:33,0:17:0.47:0,0,1	0/0:18,0:18:14.36:0,14,138	0/1:21,1:22:74.72:75,0,194	0/0:20,0:20:12.01:0,12,155	0/0:23,0:23:3.45:0,3,22	0/1:14,1:15:11.94:12,0,157	0/0:14,0:14:18.01:0,18,208	0/0:15,0:15:17.56:0,18,195	0/0:5,0:8:12.02:0,12,141	0/0:10,0:10:5.98:0,6,65	0/1:17,0:16:4.33:4,0,104	0/0:14,0:13:6.70:0,7,198	0/0:12,0:16:9.01:0,9,95	1/1:19,11:31:22.62:218,23,0	0/1:10,0:10:21.54:22,0,55	0/1:22,0:21:23.41:23,0,66	0/1:25,0:24:26.66:27,0,89	0/1:17,0:17:2.24:2,0,218	0/0:17,0:17:18.02:0,18,248	0/1:15,0:16:2.21:2,0,88	0/0:26,0:25:37.50:0,38,435	0/1:14,0:13:7.35:7,0,133	0/1:17,0:17:4.88:5,0,196	0/1:23,2:26:65.90:113,0,66	0/0:9,0:8:8.62:0,9,96
chr10	2532447	.	GTA	G	166.25	PASS	AB=0.922;AC=9;AF=0.161;AN=56;BaseQRankSum=5.577;DP=413;FS=38.357;HRun=0;HaplotypeScore=65.0260;InbreedingCoeff=-0.1744;MQ=62.31;MQ0=8;MQRankSum=-0.358;QD=1.20;ReadPosRankSum=-0.983;VQSLOD=-0.0256;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:14.33:0,14,137	0/1:2,2:4:15.98:65,0,16	0/0:23,0:15:36.56:0,37,348	0/0:19,0:14:38.11:0,38,315	0/0:13,0:13:10.90:0,11,220	0/1:21,2:23:74.18:74,0,443	0/0:12,0:12:29.60:0,30,349	0/0:17,0:16:47.87:0,48,405	0/0:14,0:14:21.35:0,21,343	0/0:20,0:20:54.01:0,54,617	0/0:14,0:14:26.09:0,26,254	0/0:5,0:5:12.04:0,12,157	0/0:11,0:11:23.95:0,24,249	0/0:12,2:13:15.84:0,16,275	0/0:17,0:17:16.18:0,16,437	0/0:7,0:7:14.70:0,15,127	0/1:27,0:26:44.94:45,0,156	0/1:6,0:6:39.45:39,0,126	0/1:11,3:13:30.21:30,0,296	0/1:14,1:15:28.76:29,0,205	0/1:17,1:18:0.57:1,0,406	0/0:15,0:15:38.39:0,38,485	0/0:16,0:16:35.82:0,36,322	0/0:19,0:18:9.27:0,9,621	0/1:14,0:13:5.83:6,0,294	0/0:13,0:13:31.38:0,31,456	0/1:17,0:17:8.13:8,0,269	0/0:11,0:11:29.94:0,30,274
chr10	2533549	.	TG	T	912.28	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.480;DP=518;FS=4.266;HRun=2;HaplotypeScore=60.3808;InbreedingCoeff=0.8843;MQ=82.04;MQ0=0;MQRankSum=-0.647;QD=20.27;ReadPosRankSum=-0.528;VQSLOD=3.4284;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,28:30:57.18:735,57,0	0/0:6,0:6:17.85:0,18,236	0/0:27,1:26:26.58:0,27,582	0/0:16,1:16:3.21:0,3,314	0/0:20,0:20:57.18:0,57,828	0/0:16,0:16:45.14:0,45,648	0/0:20,0:20:57.19:0,57,849	0/0:18,0:17:39.13:0,39,582	0/0:31,0:31:84.27:0,84,1213	0/0:20,0:20:48.11:0,48,665	0/0:18,0:18:45.12:0,45,614	0/0:14,0:14:42.13:0,42,581	0/0:16,0:16:45.12:0,45,627	0/0:11,0:11:27.09:0,27,405	0/0:11,0:11:33.11:0,33,495	0/0:23,0:23:63.19:0,63,902	1/1:14,1:15:28.36:298,28,0	0/0:9,0:9:24.08:0,24,357	0/0:19,0:19:51.13:0,51,698	0/0:17,0:17:42.07:0,42,599	0/0:26,0:26:75.11:0,75,1059	0/0:29,0:29:81.27:0,81,1177	0/0:16,0:16:48.16:0,48,716	0/0:6,0:6:18.06:0,18,270	0/0:26,0:26:75.22:0,75,1063	0/0:25,0:25:72.21:0,72,1020	0/0:28,0:28:78.26:0,78,1132	0/0:3,0:3:9.03:0,9,135
chr10	2534810	.	CAG	C	531.86	PASS	AB=0.943;AC=5;AF=0.089;AN=56;BaseQRankSum=7.472;DP=721;FS=5.271;HRun=0;HaplotypeScore=91.5837;InbreedingCoeff=0.3793;MQ=58.83;MQ0=23;MQRankSum=1.823;QD=4.06;ReadPosRankSum=-1.515;VQSLOD=1.9879;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:30:17.40:0,17,199	0/0:15,0:15:45.12:0,45,667	0/0:46,0:11:12:0,12,130	0/1:76,1:15:30.13:30,0,48	0/0:15,0:15:42.13:0,42,664	0/0:15,0:15:30.10:0,30,487	0/0:28,0:28:31.85:0,32,1005	0/0:33,0:32:78.22:0,78,1228	0/0:22,0:22:57.17:0,57,879	0/0:25,0:24:63.21:0,63,1010	0/0:15,0:15:42.14:0,42,696	0/0:24,0:24:54.15:0,54,830	0/0:24,0:24:69.24:0,69,1142	0/0:14,0:14:36.10:0,36,539	0/0:28,0:28:72.23:0,72,1152	0/0:23,0:23:63.20:0,63,1018	1/1:21,5:26:50.63:602,51,0	0/0:18,0:18:47.60:0,48,684	0/0:25,0:19:41.98:0,42,635	0/0:19,0:19:48.15:0,48,758	0/0:48,0:46:99:0,106,1797	0/1:19,1:20:2.19:2,0,451	0/0:18,0:18:38.47:0,38,565	0/0:32,0:32:72.66:0,73,1117	0/0:18,0:17:45.11:0,45,666	0/0:31,0:31:87.28:0,87,1370	0/0:23,0:22:66.22:0,66,1060	0/1:7,1:8:12.01:12,0,257
chr10	2534814	.	GAGAGAGAGAC	G	121.49	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.883;DP=747;FS=10.672;HRun=0;HaplotypeScore=191.6531;InbreedingCoeff=0.7048;MQ=58.45;MQ0=21;MQRankSum=-4.033;QD=3.68;ReadPosRankSum=-1.124;VQSLOD=1.7483;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,25:32:11.97:207,12,0	0/0:15,0:15:30.09:0,30,1228	0/0:49,0:10:5.91:0,6,49	0/0:82,0:17:0.63:0,1,39	0/0:18,0:17:44.13:0,44,1129	0/0:16,0:16:29.98:0,30,1026	0/0:29,0:29:60.21:0,60,2144	0/0:38,0:37:69.22:0,69,1689	0/0:22,0:22:42.14:0,42,1502	0/0:26,0:25:66.21:0,66,2139	0/0:17,0:17:42.13:0,42,1578	0/0:24,0:24:45.15:0,45,1822	0/0:24,0:24:66.21:0,66,2451	0/0:13,0:13:33.11:0,33,1356	0/0:28,0:28:66.15:0,66,2102	0/0:21,0:21:57.18:0,57,1822	0/0:27,0:27:48.07:0,48,1065	0/0:18,0:18:42.12:0,42,1380	0/0:21,0:19:45.02:0,45,1236	0/0:21,0:21:47.83:0,48,1694	0/0:47,0:45:77.14:0,77,3521	0/0:19,0:19:30.10:0,30,1022	0/0:20,0:20:36.05:0,36,1324	0/0:33,0:33:66.22:0,66,2704	0/0:19,0:18:42.13:0,42,1242	0/0:32,0:32:72.24:0,72,2290	0/0:24,0:23:54.16:0,54,2108	0/0:10,0:10:23.44:0,23,690
chr10	2534908	.	CAG	C	741.03	PASS	AB=0.911;AC=6;AF=0.107;AN=56;BaseQRankSum=6.311;DP=685;FS=2.450;HRun=0;HaplotypeScore=102.0451;InbreedingCoeff=0.2395;MQ=71.21;MQ0=8;MQRankSum=-0.461;QD=7.97;ReadPosRankSum=1.356;VQSLOD=3.4041;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,1:38:49.27:0,49,1356	0/1:7,1:8:17.14:17,0,252	0/0:32,0:11:11.02:0,11,148	0/0:54,0:28:6.48:0,6,114	0/0:17,0:17:39.13:0,39,629	0/0:17,0:17:39.13:0,39,644	0/0:27,0:27:57.16:0,57,898	0/0:30,0:30:69.19:0,69,1092	0/0:19,0:19:57.17:0,57,922	0/0:31,0:31:48.89:0,49,1282	0/0:10,0:10:27.08:0,27,420	0/1:22,2:24:16.15:16,0,827	0/0:18,1:19:7.02:0,7,662	0/0:24,0:24:63.21:0,63,1039	0/0:30,0:30:72.25:0,72,1178	0/1:17,2:19:25.63:26,0,648	1/1:3,26:29:63.20:802,63,0	0/1:12,1:13:6.07:6,0,390	0/0:25,0:24:60.19:0,60,975	0/0:21,0:21:54.18:0,54,870	0/0:49,0:49:99:0,105,1675	0/0:14,0:14:39.11:0,39,590	0/0:23,0:23:51.08:0,51,796	0/0:35,0:35:84.24:0,84,1368	0/0:25,1:26:34.02:0,34,1055	0/0:15,0:15:36.11:0,36,569	0/0:13,0:13:33.11:0,33,543	0/0:19,0:19:45.15:0,45,736
chr10	2536515	.	AGCTCATGGTC	A	222.21	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.438;DP=436;FS=9.103;HRun=0;HaplotypeScore=118.1665;InbreedingCoeff=0.7735;MQ=81.27;MQ0=2;MQRankSum=-1.765;QD=55.55;ReadPosRankSum=1.465;VQSLOD=2.6811;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,4:4:9.03:305,9,0	0/0:6,0:6:15.05:0,15,825	0/0:32,0:15:42.02:0,42,1738	0/0:33,0:16:27.32:0,27,1362	0/0:23,0:23:66.23:0,66,3393	0/0:8,0:8:24.08:0,24,1319	0/0:14,0:13:36.12:0,36,1977	0/0:28,0:28:69.24:0,69,3511	0/0:12,0:12:30.10:0,30,1447	0/0:21,0:21:63.19:0,63,3040	0/0:18,0:18:54.19:0,54,2964	0/0:11,0:11:33.11:0,33,1813	0/0:12,0:12:30.10:0,30,1628	0/0:12,0:12:36.12:0,36,1976	0/0:12,0:12:33.11:0,33,1771	0/0:12,0:12:33.11:0,33,1814	0/0:23,0:23:69.24:0,69,3761	0/0:9,0:9:24.08:0,24,1319	0/0:20,0:20:60.21:0,60,3166	0/0:24,0:24:69.24:0,69,3674	0/0:10,0:10:27.09:0,27,1472	0/0:10,0:10:30.10:0,30,1644	0/0:12,0:12:36.12:0,36,1979	0/0:11,0:11:27.09:0,27,1451	0/0:19,0:19:54.19:0,54,2939	0/0:20,0:20:51.18:0,51,2665	0/0:14,0:14:36.12:0,36,1952	0/0:1,0:1:3.01:0,3,165
chr10	2537283	.	A	AG	121.17	PASS	AC=2;AF=0.037;AN=54;BaseQRankSum=0.440;DP=267;FS=7.836;HRun=8;HaplotypeScore=39.0120;InbreedingCoeff=0.5720;MQ=74.22;MQ0=12;MQRankSum=-0.923;QD=6.73;ReadPosRankSum=-1.486;VQSLOD=-0.3473;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,11:18:20.98:213,21,0	0/0:5,0:5:9:0,9,82	0/0:28,0:14:21:0,21,189	0/0:33,0:16:32.15:0,32,265	0/0:10,0:9:18:0,18,161	0/0:10,0:9:23.99:0,24,214	0/0:19,0:18:45:0,45,407	0/0:9,0:6:6.42:0,6,49	0/0:8,0:7:11.99:0,12,110	0/0:6,0:6:15.01:0,15,137	0/0:5,0:5:12.01:0,12,110	0/0:7,0:7:18.01:0,18,164	0/0:10,0:9:11.99:0,12,110	0/0:7,0:6:18.01:0,18,164	0/0:11,0:11:17.97:0,18,160	0/0:9,0:8:21:0,21,188	0/0:11,0:11:24.01:0,24,220	./.	0/0:8,0:8:14.99:0,15,132	0/0:8,0:8:15:0,15,135	0/0:8,0:7:12:0,12,110	0/0:6,0:6:12.01:0,12,110	0/0:8,0:8:18.01:0,18,165	0/0:6,0:6:12:0,12,110	0/0:6,0:6:11.99:0,12,107	0/0:2,0:2:6:0,6,55	0/0:6,0:6:17.98:0,18,157	0/0:3,0:3:6:0,6,55
chr10	2537369	.	AGC	A	235.68	PASS	AB=1.000;AC=18;AF=0.321;AN=56;BaseQRankSum=4.202;DP=335;FS=9.836;HRun=0;HaplotypeScore=53.2037;InbreedingCoeff=-0.1751;MQ=66.81;MQ0=27;MQRankSum=-1.207;QD=1.16;ReadPosRankSum=-3.654;VQSLOD=-0.7644;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:10:1.33:0,1,3	0/1:5,0:5:2.30:2,0,92	0/1:19,0:6:2.50:2,0,15	0/1:48,0:25:5.81:44,0,6	0/1:8,0:8:8.91:9,0,62	0/0:7,0:7:3:0,3,48	0/1:7,0:7:21.01:52,0,21	0/1:22,0:19:36.09:36,0,144	0/0:9,0:9:14.57:0,15,149	0/0:14,0:14:17.35:0,17,216	0/1:6,0:4:2.11:2,0,12	0/1:10,0:10:18.31:18,0,25	0/0:17,0:17:4.10:0,4,174	0/1:8,0:8:33.23:46,0,33	0/1:15,0:15:15.27:15,0,111	0/0:5,0:5:14.96:0,15,127	1/1:4,9:11:3.84:22,4,0	0/1:4,0:4:10.32:10,0,42	0/0:15,0:11:2.07:0,2,115	0/1:7,0:7:6.17:6,0,44	0/1:19,0:16:67.03:67,0,78	0/0:14,0:13:11.56:0,12,179	0/0:9,0:9:10.88:0,11,66	0/0:7,0:7:14.18:0,14,118	0/0:13,0:13:6.68:0,7,108	0/0:9,0:9:0.62:0,1,44	0/1:5,0:5:3.23:3,0,27	1/1:8,0:6:5.61:41,6,0
chr10	2538482	.	ATGATG	A	564.77	PASS	AB=1.000;AC=4;AF=0.071;AN=56;BaseQRankSum=3.877;DP=581;FS=4.070;HRun=0;HaplotypeScore=103.7150;InbreedingCoeff=0.4570;MQ=58.00;MQ0=9;MQRankSum=0.581;QD=6.80;ReadPosRankSum=0.243;VQSLOD=2.2050;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:31,0:29:57.52:58,0,548	0/0:11,0:11:23.88:0,24,426	0/0:22,0:10:27.07:0,27,410	0/0:22,0:12:35.48:0,35,461	0/0:17,0:17:44.94:0,45,957	0/0:29,0:29:77.46:0,77,1860	0/0:29,0:29:45.34:0,45,1792	0/0:34,0:34:61.33:0,61,1546	0/0:19,0:19:57.20:0,57,1439	0/0:22,0:21:49.16:0,49,1300	0/0:20,0:20:60.18:0,60,1187	0/0:19,0:19:18.26:0,18,1236	0/0:12,0:12:33.11:0,33,651	0/0:23,0:23:57.18:0,57,1641	0/0:7,0:7:18.06:0,18,492	0/0:8,0:8:24.08:0,24,606	1/1:2,37:39:30.07:605,30,0	0/0:18,0:18:49.98:0,50,1194	0/0:27,0:25:22.02:0,22,1207	0/0:18,0:18:49.04:0,49,1033	0/0:32,0:30:48.37:0,48,1868	0/0:17,0:16:48.16:0,48,1011	0/0:12,0:12:33.11:0,33,626	0/0:27,0:27:78.25:0,78,1806	0/0:17,0:17:42.14:0,42,952	0/0:22,0:22:66.22:0,66,1454	0/0:13,0:13:39.12:0,39,839	0/1:13,0:13:17.15:17,0,577
chr10	2538484	.	GA	G	803.79	PASS	AB=0.929;AC=5;AF=0.089;AN=56;BaseQRankSum=8.423;DP=588;FS=5.566;HRun=1;HaplotypeScore=63.9229;InbreedingCoeff=0.6792;MQ=57.82;MQ0=11;MQRankSum=-0.358;QD=9.80;ReadPosRankSum=3.731;VQSLOD=1.6336;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,10:29:80.90:796,81,0	0/0:10,0:10:23.84:0,24,335	0/0:21,0:9:20.24:0,20,339	0/0:23,0:12:32.16:0,32,416	0/0:16,0:16:45.15:0,45,656	0/0:27,1:28:39.31:0,39,1152	0/0:27,2:29:3.38:0,3,1090	0/0:33,0:33:95.89:0,96,1278	0/0:19,0:19:57.19:0,57,895	0/0:23,0:22:38.32:0,38,868	0/0:21,0:21:59.97:0,60,827	0/0:18,1:19:18.25:0,18,776	0/0:13,0:13:33.11:0,33,520	0/0:24,0:24:69.17:0,69,1031	0/0:6,0:6:18.06:0,18,287	0/0:9,0:9:24.08:0,24,369	1/1:38,0:38:4.27:116,4,0	0/0:18,0:18:43.04:0,43,730	0/0:27,0:25:56.91:0,57,824	0/0:18,0:18:49.02:0,49,693	0/0:35,1:33:51.36:0,51,1301	0/0:18,0:17:48.16:0,48,724	0/0:15,0:15:33.65:0,34,494	0/0:28,0:28:77.98:0,78,1192	0/0:15,0:15:42.14:0,42,643	0/0:22,0:22:66.22:0,66,1003	0/0:14,0:14:42.09:0,42,581	0/1:12,1:13:5.88:6,0,382
chr10	2538660	.	AT	A	767.99	PASS	AB=0.829;AC=6;AF=0.107;AN=56;BaseQRankSum=6.754;DP=541;FS=9.359;HRun=12;HaplotypeScore=58.3952;InbreedingCoeff=0.6262;MQ=70.40;MQ0=0;MQRankSum=0.462;QD=9.48;ReadPosRankSum=2.232;VQSLOD=2.0101;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,21:23:31.37:417,31,0	0/0:9,0:9:24.04:0,24,238	0/0:10,0:10:14.99:0,15,135	0/0:12,0:12:14.02:0,14,133	0/0:27,0:27:66.96:0,67,655	0/1:13,5:19:4.56:5,0,307	0/0:19,0:19:21.35:0,21,363	0/0:26,0:26:66.03:0,66,637	0/0:14,0:14:39.05:0,39,379	0/0:27,2:30:28.55:0,29,628	0/0:23,1:24:39.85:0,40,567	0/0:25,0:25:60.08:0,60,587	0/1:11,2:13:13.46:13,0,229	0/0:19,0:19:48.53:0,49,469	0/0:12,1:13:9.84:0,10,281	0/0:20,0:21:59.93:0,60,581	1/1:4,22:26:59.76:464,60,0	0/0:20,1:21:30.80:0,31,470	0/0:13,0:13:36.02:0,36,344	0/0:29,1:30:48.90:0,49,672	0/0:20,1:21:30.86:0,31,489	0/0:23,0:23:57.11:0,57,578	0/0:20,1:21:54.66:0,55,503	0/0:13,0:13:36.07:0,36,365	0/0:20,3:23:8.72:0,9,484	0/0:15,0:15:42.07:0,42,417	0/0:22,1:24:30.70:0,31,478	0/0:7,0:7:21.04:0,21,213
chr10	2541673	.	TA	T	589.60	PASS	AB=0.877;AC=8;AF=0.143;AN=56;BaseQRankSum=9.152;DP=587;FS=0.540;HRun=11;HaplotypeScore=55.5712;InbreedingCoeff=0.3676;MQ=70.58;MQ0=0;MQRankSum=0.681;QD=4.91;ReadPosRankSum=3.326;VQSLOD=0.6565;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,19:22:6.87:347,7,0	0/0:10,1:11:5.18:0,5,232	0/1:10,2:9:14.65:15,0,29	0/0:11,0:11:11.98:0,12,116	0/0:30,2:32:43.92:0,44,862	0/0:30,0:30:72.62:0,73,818	0/0:20,0:20:48.09:0,48,496	0/1:22,4:26:10.35:10,0,507	0/0:31,0:31:81.18:0,81,851	0/1:20,3:23:28.83:29,0,325	0/0:27,0:29:71.96:0,72,730	0/0:20,0:20:48.11:0,48,504	0/0:20,1:21:32.50:0,32,538	0/0:20,0:20:45.03:0,45,448	0/0:21,0:21:57.14:0,57,602	0/0:19,1:20:29.49:0,29,519	1/1:4,16:20:38.95:320,39,0	0/0:9,0:9:17.99:0,18,179	0/0:11,0:11:27.04:0,27,273	0/0:26,0:26:57.13:0,57,600	0/1:14,2:16:4.19:4,0,363	0/0:25,1:26:50.51:0,51,722	0/0:16,0:17:44.94:0,45,454	0/0:16,0:16:36.09:0,36,384	0/0:27,2:29:31.80:0,32,725	0/0:25,1:26:41.51:0,42,638	0/0:19,2:21:4.84:0,5,455	0/0:19,1:20:29.44:0,29,494
chr10	2542266	.	AT	A	1079.82	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.094;DP=598;FS=13.010;HRun=7;HaplotypeScore=55.9187;InbreedingCoeff=0.9693;MQ=74.01;MQ0=0;MQRankSum=-4.554;QD=24.00;ReadPosRankSum=1.827;VQSLOD=3.1541;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,20:22:34.27:528,34,0	0/0:3,0:3:9.03:0,9,113	0/0:18,0:18:54.12:0,54,632	0/0:15,0:15:35.84:0,36,404	0/0:39,1:40:80.75:0,81,1327	0/0:21,0:21:57.17:0,57,704	0/0:16,0:16:42.13:0,42,528	0/0:18,0:18:51.15:0,51,629	0/0:23,0:23:69.22:0,69,867	0/0:20,0:19:51.16:0,51,631	0/0:21,0:21:54.16:0,54,659	0/0:20,0:20:54.17:0,54,668	0/0:24,0:24:72.23:0,72,905	0/0:22,0:22:63.20:0,63,793	0/0:19,0:19:57.18:0,57,717	0/0:27,0:27:81.26:0,81,1018	1/1:1,22:23:66.15:673,66,0	0/0:12,0:12:33.06:0,33,396	0/0:14,0:14:39.09:0,39,463	0/0:36,0:36:93.29:0,93,1158	0/0:12,0:12:33.11:0,33,415	0/0:25,0:25:72.22:0,72,895	0/0:23,0:23:60.19:0,60,754	0/0:13,0:13:36.11:0,36,452	0/0:38,0:38:99:0,114,1414	0/0:26,0:26:72.22:0,72,895	0/0:39,0:39:99:0,111,1374	0/0:8,0:8:24.08:0,24,302
chr10	2548345	.	T	TTG	6554.52	PASS	AB=0.846;AC=29;AF=0.537;AN=54;BaseQRankSum=-2.054;DP=1204;FS=3.970;HRun=0;HaplotypeScore=132.5108;InbreedingCoeff=-0.6973;MQ=38.63;MQ0=291;MQRankSum=-3.737;QD=5.84;ReadPosRankSum=-2.850;VQSLOD=3.8787;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:42,0:23:10.42:93,0,10	0/1:15,2:13:28.07:28,0,147	0/0:38,0:5:2.91:0,3,34	0/1:31,0:4:0:0,0,0	0/1:20,7:20:99:187,0,251	0/1:32,10:37:99:164,0,515	0/1:27,9:31:99:383,0,385	./.	0/1:45,12:42:99:462,0,551	0/1:36,10:37:99:275,0,547	0/1:19,6:21:99:160,0,283	0/1:42,12:36:99:458,0,429	0/1:47,6:34:66.09:66,0,614	0/1:40,10:39:99:503,0,299	0/1:56,15:58:99:382,0,847	0/1:50,11:46:99:261,0,804	1/1:21,3:28:23.60:214,24,0	0/1:28,6:29:99:256,0,368	0/1:44,4:25:99:151,0,162	0/1:36,5:26:81.25:81,0,474	0/1:88,23:93:99:1037,0,920	0/1:20,7:24:99:133,0,358	0/1:27,4:24:47.22:47,0,385	0/1:43,12:42:99:553,0,429	0/1:17,9:24:99:304,0,249	0/1:39,1:20:12.20:154,0,12	1/1:30,1:23:17.18:136,17,0	1/1:9,0:5:6.01:65,6,0
chr10	2548409	.	TTG	T	473.22	PASS	AB=0.868;AC=9;AF=0.161;AN=56;BaseQRankSum=4.434;DP=1194;FS=26.363;HRun=0;HaplotypeScore=128.0104;InbreedingCoeff=0.5751;MQ=44.92;MQ0=486;MQRankSum=-4.066;QD=2.43;ReadPosRankSum=2.490;VQSLOD=0.7094;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:18:11.77:0,12,330	0/0:14,0:5:15.04:0,15,241	0/0:75,1:14:32.98:0,33,440	0/0:62,2:18:30.55:0,31,274	0/0:35,0:20:12.04:0,12,226	0/0:31,0:16:21.07:0,21,369	0/0:42,0:15:27.03:0,27,450	1/1:30,19:4:9.03:136,9,0	0/0:45,0:33:81.27:0,81,1456	0/0:36,0:18:54.19:0,54,1080	0/0:27,0:16:18.06:0,18,337	0/0:48,0:28:36.24:0,36,1102	0/0:31,0:12:24.05:0,24,403	0/0:42,0:31:72.04:0,72,1226	0/0:60,0:33:60.20:0,60,1100	0/0:41,0:26:56.98:0,57,1065	0/1:44,1:17:20.83:21,0,29	0/1:41,1:17:48.19:48,0,469	0/0:40,0:10:30.07:0,30,522	0/0:36,0:13:36.12:0,36,706	0/0:129,1:75:99:0,124,2180	0/0:27,0:9:12.04:0,12,210	0/0:22,0:12:15.05:0,15,250	0/0:66,0:38:57.19:0,57,1051	0/0:30,0:18:26.85:0,27,480	1/1:9,23:9:21:285,21,0	0/1:10,13:15:1.12:83,0,1	1/1:1,1:1:3.01:46,3,0
chr10	2548540	.	TTG	T	4203.35	PASS	AB=0.858;AC=22;AF=0.407;AN=54;BaseQRankSum=4.209;DP=1700;FS=7.856;HRun=0;HaplotypeScore=222.7922;InbreedingCoeff=-0.6865;MQ=36.49;MQ0=175;MQRankSum=-0.933;QD=3.07;ReadPosRankSum=3.826;VQSLOD=1.5000;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:77,0:68:1.06:1,0,371	0/1:17,2:19:13.11:13,0,239	0/0:34,0:1:2.98:0,3,22	./.	0/1:44,6:42:94.52:95,0,399	0/1:43,8:47:99:111,0,590	0/1:55,19:66:99:389,0,523	0/0:90,0:48:22.80:0,23,165	0/1:59,7:57:99:208,0,619	0/1:51,10:49:99:211,0,464	0/1:45,5:43:99:115,0,516	0/1:39,25:60:99:426,0,350	0/1:56,5:53:96.51:97,0,938	0/1:57,15:69:99:440,0,557	0/1:53,23:74:99:374,0,754	0/1:41,23:59:99:447,0,660	0/1:44,0:37:15.55:16,0,41	0/1:36,9:40:8.22:8,0,714	0/1:31,3:18:49.70:50,0,206	0/1:48,15:57:99:148,0,699	0/1:130,14:117:99:473,0,1011	0/1:55,1:53:52.07:52,0,561	0/1:36,7:37:99:211,0,255	0/1:57,22:77:99:224,0,824	0/1:46,8:46:94.12:94,0,628	0/0:72,0:52:38.83:0,39,293	0/0:45,0:41:10.24:0,10,112	0/0:15,0:14:5.93:0,6,41
chr10	2557088	.	CGTGT	C	31713.11	PASS	AB=0.715;AC=32;AF=0.571;AN=56;BaseQRankSum=17.786;DP=1889;FS=2.548;HRun=0;HaplotypeScore=403.1862;InbreedingCoeff=-0.6042;MQ=66.77;MQ0=8;MQRankSum=-5.991;QD=17.80;ReadPosRankSum=3.871;VQSLOD=3.3130;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:103,0:106:99:0,182,4164	0/1:9,8:18:99:337,0,254	0/1:59,7:47:99:298,0,486	0/1:71,13:75:99:562,0,681	0/1:31,26:59:99:984,0,682	0/1:40,25:67:99:979,0,1355	0/1:41,20:64:99:663,0,1028	1/1:77,55:133:99:2461,162,0	0/1:35,26:63:99:1164,0,867	0/1:35,28:65:99:1222,0,1019	0/1:28,30:59:99:1177,0,1044	0/1:34,27:60:99:1190,0,772	0/1:32,32:65:99:1278,0,836	0/1:34,24:58:99:924,0,1084	0/1:30,23:58:99:892,0,945	0/1:30,28:63:99:1329,0,762	1/1:23,46:71:99:1901,120,0	0/1:34,12:47:99:548,0,961	0/1:47,17:64:99:677,0,740	0/1:36,35:73:99:1363,0,923	0/1:58,25:83:99:857,0,1398	0/1:23,11:35:99:635,0,663	0/1:15,23:40:99:1028,0,184	0/1:40,23:64:99:860,0,1288	0/1:26,21:49:99:988,0,395	1/1:25,49:79:35.94:2438,36,0	1/1:35,81:125:99:3622,223,0	1/1:27,36:64:57.74:1337,58,0
chr10	2557232	.	G	GT	6457.30	PASS	AB=0.801;AC=21;AF=0.375;AN=56;BaseQRankSum=-14.847;DP=1494;FS=18.684;HRun=7;HaplotypeScore=144.3653;InbreedingCoeff=-0.6024;MQ=68.52;MQ0=1;MQRankSum=1.494;QD=6.75;ReadPosRankSum=1.608;VQSLOD=1.3512;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:68,0:68:99:0,183,1759	0/1:29,11:40:99:294,0,556	0/1:32,3:29:40.75:41,0,352	0/0:24,0:21:11.97:0,12,215	0/1:62,23:85:99:541,0,1254	0/1:46,16:62:99:550,0,873	0/1:17,2:19:21.40:21,0,383	0/0:129,0:128:99:0,296,2901	0/1:29,15:44:99:369,0,498	0/1:47,23:70:99:685,0,731	0/1:53,13:66:99:282,0,1089	0/1:25,16:41:99:356,0,506	0/1:32,15:47:99:489,0,516	0/1:23,8:31:99:175,0,446	0/1:26,10:36:99:136,0,527	0/1:30,13:43:99:315,0,690	0/0:72,0:72:99:0,195,1861	0/1:31,10:41:99:338,0,551	0/1:42,11:53:99:249,0,724	0/1:53,27:80:99:703,0,992	0/1:19,8:27:99:188,0,364	0/1:16,0:16:45.08:45,0,170	0/1:32,15:47:99:288,0,570	0/1:12,4:16:96.81:97,0,299	0/1:41,17:58:99:297,0,838	0/0:88,0:88:99:0,219,2115	0/0:108,0:108:99:0,285,2718	0/0:48,0:48:99:0,129,1246
chr10	2560515	.	TCC	T	1576.38	PASS	AB=0.925;AC=11;AF=0.204;AN=54;BaseQRankSum=-0.525;DP=737;FS=31.078;HRun=11;HaplotypeScore=91.5718;InbreedingCoeff=0.4908;MQ=45.76;MQ0=50;MQRankSum=0.430;QD=6.28;ReadPosRankSum=5.911;VQSLOD=-0.4258;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:12,2:10:2.55:64,3,0	0/0:6,0:6:8.91:0,9,60	0/0:35,0:14:7.92:0,8,181	0/1:30,0:10:15.19:15,0,70	0/0:28,1:28:11.08:0,11,126	0/1:20,1:22:12.86:13,0,72	0/0:29,0:29:49.79:0,50,405	1/1:46,18:57:16.10:516,16,0	0/0:21,0:24:32.39:0,32,214	0/0:23,0:30:29.70:0,30,229	0/0:28,0:28:29.19:0,29,164	0/0:19,0:18:22.87:0,23,147	0/0:23,0:22:34.90:0,35,221	0/0:18,0:19:18.90:0,19,97	0/0:26,0:24:1.98:0,2,187	0/0:25,0:23:26.08:0,26,223	./.	0/0:5,0:4:7.98:0,8,42	0/0:23,0:19:15.98:0,16,106	0/0:14,0:17:14.38:0,14,89	0/0:14,0:17:18.69:0,19,92	0/0:28,0:30:30.77:0,31,215	0/0:25,0:28:13.14:0,13,68	0/0:14,0:15:15.62:0,16,129	0/0:26,0:25:1.45:0,1,154	1/1:10,26:34:69.09:719,69,0	1/1:20,29:46:23.64:236,24,0	0/1:31,2:32:64.20:171,0,64
chr10	2563455	.	C	CA	513.23	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.057;DP=667;FS=10.274;HRun=5;HaplotypeScore=57.8198;InbreedingCoeff=0.8348;MQ=50.22;MQ0=55;MQRankSum=0.428;QD=13.51;ReadPosRankSum=-0.266;VQSLOD=1.5168;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:18,20:28:31.45:608,31,0	0/0:11,0:11:27.07:0,27,302	0/0:31,0:6:11.43:0,11,123	0/0:21,0:3:2.22:0,2,7	0/0:32,0:29:63.18:0,63,714	0/0:19,0:19:36.08:0,36,392	0/0:20,0:18:45.13:0,45,508	0/0:27,0:21:51.14:0,51,578	0/0:21,0:20:35.71:0,36,408	0/0:25,0:22:60:0,60,678	0/0:30,0:26:63.18:0,63,708	0/0:20,0:19:33.09:0,33,374	0/0:17,0:16:30.09:0,30,340	0/0:19,0:16:36.10:0,36,408	0/0:21,0:20:42.12:0,42,475	0/0:26,0:26:63.16:0,63,703	0/0:26,0:25:63.18:0,63,713	0/0:25,0:25:69.17:0,69,764	0/0:25,0:13:36.10:0,36,408	0/0:20,0:20:54.14:0,54,600	0/0:16,0:15:39.04:0,39,427	0/0:29,0:21:54.15:0,54,610	0/0:20,0:18:30.09:0,30,340	0/0:42,0:41:99:0,120,1347	0/0:15,0:14:39.08:0,39,417	0/0:28,0:27:78.21:0,78,875	0/0:32,0:24:33.09:0,33,373	0/0:11,0:11:18.05:0,18,204
chr10	2564060	.	TG	T	172.28	PASS	AC=2;AF=0.056;AN=36;BaseQRankSum=2.083;DP=657;FS=0.000;HRun=2;HaplotypeScore=26.2707;InbreedingCoeff=0.6594;MQ=13.14;MQ0=411;MQRankSum=0.093;QD=4.31;ReadPosRankSum=-1.143;VQSLOD=0.0122;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:31,9:10:21.07:261,21,0	./.	./.	./.	./.	0/0:25,0:5:15.05:0,15,213	0/0:30,0:9:24.08:0,24,359	0/0:20,0:6:18.06:0,18,268	0/0:34,0:11:30.06:0,30,414	0/0:21,0:1:3.01:0,3,45	./.	0/0:21,0:7:21.07:0,21,314	0/0:19,0:6:15.05:0,15,224	0/0:30,0:7:21.07:0,21,314	0/0:27,0:12:36.12:0,36,529	0/0:28,0:8:24.08:0,24,359	0/0:54,0:6:18.06:0,18,263	0/0:41,0:4:12.04:0,12,180	0/0:23,0:5:12.04:0,12,180	./.	./.	./.	./.	0/0:36,0:9:24.08:0,24,348	0/0:19,0:3:6.02:0,6,90	0/0:19,0:3:9.03:0,9,135	0/0:27,0:6:18.06:0,18,269	./.
chr10	2566633	.	G	GC	1112.10	PASS	AB=0.771;AC=8;AF=0.143;AN=56;BaseQRankSum=-0.195;DP=545;FS=7.852;HRun=9;HaplotypeScore=80.0123;InbreedingCoeff=0.3403;MQ=52.61;MQ0=4;MQRankSum=-0.725;QD=8.12;ReadPosRankSum=1.283;VQSLOD=1.5084;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:22:28.70:0,29,84	0/0:1,0:1:3:0,3,26	0/0:14,0:6:11.98:0,12,100	0/0:21,0:15:20.62:0,21,141	0/1:7,2:9:12.19:12,0,128	0/0:19,0:18:20.21:0,20,163	0/0:36,0:33:60.36:0,60,489	0/1:27,2:32:48.74:69,0,49	0/0:31,0:30:38.86:0,39,285	0/0:13,0:13:29.20:0,29,239	0/0:4,0:3:3:0,3,26	0/0:26,0:24:38.21:0,38,319	0/0:18,0:18:35.99:0,36,312	0/0:20,0:19:31.39:0,31,241	0/0:28,0:25:35.01:0,35,242	0/0:18,0:17:17.99:0,18,156	0/1:14,38:51:30.91:829,0,31	0/0:21,0:21:50.98:0,51,443	0/0:23,0:18:50.20:0,50,421	0/0:10,0:10:24:0,24,209	0/0:33,0:31:59.98:0,60,521	0/0:10,0:10:17.98:0,18,153	0/0:8,0:7:12:0,12,104	0/0:22,0:22:65.99:0,66,573	0/0:8,0:7:11.99:0,12,104	0/1:13,1:15:7.29:99,0,7	1/1:7,2:22:31.58:194,32,0	1/1:1,1:2:5.85:47,6,0
chr10	2573124	.	C	CG	2823.61	PASS	AB=0.642;AC=5;AF=0.093;AN=54;BaseQRankSum=9.321;DP=724;FS=1.967;HRun=0;HaplotypeScore=92.9033;InbreedingCoeff=-0.1032;MQ=54.29;MQ0=39;MQRankSum=-10.020;QD=15.10;ReadPosRankSum=0.285;VQSLOD=5.4716;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	0/0:6,0:5:15.05:0,15,210	0/0:24,0:16:48.15:0,48,635	0/0:24,0:13:39.09:0,39,504	0/0:13,0:13:27.09:0,27,377	0/1:14,19:32:99:241,0,253	0/1:27,36:57:99:1140,0,679	0/0:25,0:23:66.22:0,66,923	0/0:31,0:31:54.03:0,54,753	0/0:30,0:28:78.24:0,78,1065	0/0:14,0:12:18.06:0,18,251	0/0:24,0:22:45.15:0,45,625	0/0:23,0:21:39.13:0,39,545	0/0:22,0:20:42.14:0,42,586	0/0:22,0:21:30.10:0,30,419	0/1:16,16:31:99:490,0,502	0/0:27,0:27:63.21:0,63,881	0/0:26,0:26:66.19:0,66,901	0/0:16,0:13:36.12:0,36,503	0/0:21,0:21:45.15:0,45,629	0/0:65,0:60:99:0,163,2248	0/0:16,0:16:42.14:0,42,576	0/0:21,0:20:45.15:0,45,623	0/0:41,0:40:90.30:0,90,1258	0/0:27,0:25:60.16:0,60,816	0/1:18,20:38:99:634,0,642	0/0:19,0:18:39.13:0,39,544	0/1:8,13:20:99:435,0,158
chr10	2575139	.	AGAGG	A	451.26	PASS	AC=8;AF=0.400;AN=20;BaseQRankSum=3.031;DP=180;FS=11.290;HRun=0;HaplotypeScore=30.3795;InbreedingCoeff=0.4464;MQ=56.01;MQ0=10;MQRankSum=0.564;QD=8.68;ReadPosRankSum=0.211;VQSLOD=0.2804;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:18,10:28:12.04:192,12,0	./.	0/0:16,0:7:0.15:0,0,51	./.	./.	./.	./.	./.	./.	./.	./.	0/0:4,0:4:3.01:0,3,72	./.	./.	0/0:3,0:3:2.94:0,3,18	./.	./.	./.	./.	./.	0/0:5,0:4:3.01:0,3,70	./.	./.	0/0:10,0:10:6.01:0,6,96	0/0:3,0:3:3.01:0,3,72	1/1:6,9:15:23.98:260,24,0	1/1:7,1:8:3.01:48,3,0	1/1:0,1:1:3.01:48,3,0
chr10	2575250	.	G	GAGAA	1268.49	PASS	AB=0.933;AC=11;AF=0.212;AN=52;BaseQRankSum=-4.434;DP=417;FS=1.029;HRun=0;HaplotypeScore=74.9175;InbreedingCoeff=0.3422;MQ=67.50;MQ0=18;MQRankSum=1.692;QD=11.33;ReadPosRankSum=-1.577;VQSLOD=2.7602;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:20:3.13:0,3,19	0/0:0,0:4:5.74:0,6,56	./.	./.	0/0:7,0:7:12.04:0,12,186	0/0:3,0:10:12.01:0,12,112	0/1:9,0:13:21.49:21,0,40	0/1:12,0:17:0.01:0,0,0	0/0:9,0:9:18.05:0,18,256	0/1:6,0:10:63.39:63,0,157	0/0:6,0:6:9.03:0,9,139	0/1:6,0:6:25.41:25,0,62	0/0:7,0:7:9.03:0,9,139	0/0:4,0:4:6.02:0,6,91	0/0:10,0:10:18.05:0,18,256	0/0:9,0:9:12.04:0,12,186	0/1:11,11:22:23.20:375,0,23	0/0:9,0:9:18.02:0,18,220	1/1:3,2:5:6.02:141,6,0	1/1:4,10:14:24.05:507,24,0	0/0:10,0:10:21.07:0,21,325	0/0:4,0:4:6.02:0,6,93	0/0:6,0:6:11.99:0,12,158	1/1:5,18:22:12.04:282,12,0	0/0:9,0:9:8.98:0,9,111	0/0:7,0:14:17.83:0,18,159	0/0:2,0:11:18.02:0,18,166	0/0:3,0:11:21.02:0,21,195
chr10	2577292	.	T	TA	850.75	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-3.301;DP=615;FS=8.806;HRun=7;HaplotypeScore=56.3745;InbreedingCoeff=0.9809;MQ=66.81;MQ0=0;MQRankSum=-1.704;QD=26.59;ReadPosRankSum=-0.367;VQSLOD=3.8731;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,27:32:81.16:946,81,0	0/0:17,0:17:48.03:0,48,450	0/0:18,0:17:14.61:0,15,349	0/0:18,0:17:30.06:0,30,353	0/0:22,0:22:60.08:0,60,574	0/0:29,0:29:87.14:0,87,840	0/0:11,0:11:33.05:0,33,319	0/0:41,0:41:99:0,108,1030	0/0:19,0:19:54.09:0,54,521	0/0:29,0:29:78.12:0,78,753	0/0:21,0:21:54.08:0,54,521	0/0:10,0:10:30.04:0,30,284	0/0:24,0:24:57.08:0,57,550	0/0:13,0:13:36.06:0,36,348	0/0:17,0:17:48.08:0,48,464	0/0:23,0:23:69.07:0,69,653	0/0:15,0:15:39.04:0,39,370	0/0:21,0:21:57.06:0,57,542	0/0:22,0:22:54.08:0,54,522	0/0:36,0:36:93.14:0,93,898	0/0:21,0:21:57.07:0,57,544	0/0:19,0:19:54.07:0,54,515	0/0:32,1:33:56.90:0,57,827	0/0:17,0:17:42.05:0,42,399	0/0:25,0:25:72.10:0,72,691	0/0:21,0:21:57.08:0,57,551	0/0:30,0:30:75.09:0,75,712	0/0:11,0:11:30.04:0,30,284
chr10	2578921	.	C	CA	2319.01	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-5.640;DP=531;FS=10.073;HRun=9;HaplotypeScore=57.1403;InbreedingCoeff=0.9200;MQ=65.21;MQ0=0;MQRankSum=-0.010;QD=17.84;ReadPosRankSum=-2.185;VQSLOD=2.4587;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,0:11:0.72:44,1,0	0/0:9,0:9:23.99:0,24,208	0/0:16,0:16:32.90:0,33,267	0/0:17,0:15:11.17:0,11,76	0/0:26,0:26:68.97:0,69,599	0/0:19,0:19:47.94:0,48,409	0/0:16,1:18:6.47:0,6,283	1/1:11,18:28:30.90:528,31,0	0/0:17,0:17:44.99:0,45,391	0/0:28,0:29:74:0,74,626	0/0:24,0:24:65.90:0,66,564	0/0:11,0:11:26.99:0,27,234	0/0:13,0:13:32.98:0,33,286	0/0:14,0:14:35.99:0,36,312	0/0:18,0:18:44.98:0,45,391	0/0:14,0:14:26.98:0,27,234	1/1:3,1:22:54.18:289,54,0	0/0:22,0:22:56.99:0,57,495	0/0:18,0:18:50.96:0,51,438	0/0:18,0:18:44.98:0,45,391	0/0:12,0:12:20.97:0,21,182	0/0:28,0:28:68.95:0,69,595	0/0:22,0:22:62.98:0,63,547	0/0:22,0:22:53.94:0,54,462	0/0:14,0:14:33.94:0,34,288	1/1:3,18:21:31.06:558,31,0	1/1:8,28:38:80.95:877,81,0	1/1:2,6:8:18.93:201,19,0
chr10	2579474	.	GA	G	272.74	PASS	AB=0.941;AC=3;AF=0.054;AN=56;BaseQRankSum=5.820;DP=527;FS=2.017;HRun=10;HaplotypeScore=52.2021;InbreedingCoeff=0.6588;MQ=61.32;MQ0=1;MQRankSum=0.047;QD=8.52;ReadPosRankSum=-0.053;VQSLOD=1.6955;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,15:16:41.99:365,42,0	0/0:10,0:10:30.08:0,30,332	0/1:15,1:14:11.35:11,0,90	0/0:9,0:8:18:0,18,185	0/0:26,1:27:40.13:0,40,671	0/0:17,0:16:45.12:0,45,498	0/0:17,0:17:42.07:0,42,451	0/0:26,0:26:72.17:0,72,780	0/0:19,0:18:48.13:0,48,531	0/0:27,0:27:63.17:0,63,692	0/0:20,0:20:60.15:0,60,656	0/0:10,0:10:27.07:0,27,299	0/0:18,0:18:45.09:0,45,479	0/0:16,0:16:39.06:0,39,418	0/0:21,0:21:57.10:0,57,608	0/0:20,1:22:30.90:0,31,530	0/0:28,0:28:72.11:0,72,769	0/0:15,0:15:39.11:0,39,431	0/0:34,0:32:87.23:0,87,955	0/0:20,0:20:48.13:0,48,531	0/0:18,0:20:54.28:0,54,560	0/0:10,0:11:26.90:0,27,273	0/0:21,0:21:60.15:0,60,657	0/0:17,0:17:39.11:0,39,431	0/0:18,0:18:45.12:0,45,498	0/0:25,0:25:60.15:0,60,656	0/0:15,0:15:42.10:0,42,456	0/0:11,0:12:29.91:0,30,313
chr10	2586059	.	AG	A	1188.17	PASS	AC=2;AF=0.038;AN=52;BaseQRankSum=7.584;DP=577;FS=4.410;HRun=1;HaplotypeScore=56.4927;InbreedingCoeff=0.9682;MQ=56.88;MQ0=11;MQRankSum=2.951;QD=34.95;ReadPosRankSum=2.159;VQSLOD=3.6903;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,33:34:78.33:1282,78,0	0/0:15,0:15:45.15:0,45,705	./.	./.	0/0:24,0:24:66.23:0,66,1053	0/0:31,0:31:93.29:0,93,1440	0/0:14,0:14:42.13:0,42,644	0/0:22,0:19:57.18:0,57,885	0/0:21,0:21:63.19:0,63,959	0/0:35,0:34:99:0,102,1605	0/0:37,0:36:99:0,102,1579	0/0:8,0:8:24.07:0,24,361	0/0:15,0:15:45.11:0,45,670	0/0:17,0:17:51.17:0,51,815	0/0:17,0:17:51.17:0,51,815	0/0:19,0:19:57.17:0,57,863	0/0:32,0:32:93.32:0,93,1485	0/0:15,0:15:45.13:0,45,686	0/0:25,0:21:63.20:0,63,961	0/0:21,0:21:63.18:0,63,955	0/0:14,0:14:42.13:0,42,648	0/0:27,0:27:78.24:0,78,1196	0/0:23,0:23:66.21:0,66,1029	0/0:15,0:15:39.05:0,39,567	0/0:26,0:26:78.23:0,78,1195	0/0:31,0:31:93.31:0,93,1465	0/0:19,0:19:57.19:0,57,903	0/0:4,0:4:12.04:0,12,192
chr10	2588839	.	ATGTGTGTGTGTGTG	A	3230.05	PASS	AB=0.679;AC=7;AF=0.130;AN=54;BaseQRankSum=9.014;DP=612;FS=1.345;HRun=0;HaplotypeScore=221.3585;InbreedingCoeff=0.7095;MQ=54.20;MQ0=14;MQRankSum=-6.568;QD=34.36;ReadPosRankSum=-1.852;VQSLOD=2.6001;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/0:10,0:10:22.63:0,23,999	0/0:27,0:12:12.04:0,12,483	0/0:28,0:15:24.08:0,24,853	0/0:20,0:22:20.58:0,21,924	0/0:18,0:17:32.95:0,33,1198	0/0:16,0:16:12.04:0,12,412	0/1:20,18:37:99:911,0,405	0/0:33,0:33:53.47:0,53,2651	0/0:34,0:32:93.31:0,93,4611	0/0:21,0:21:42.07:0,42,1824	0/0:12,0:12:27.01:0,27,1260	0/0:19,0:19:50.19:0,50,2372	0/0:26,0:26:40.06:0,40,1727	0/0:22,0:22:45.11:0,45,2064	0/0:25,0:25:39.12:0,39,1916	0/0:26,0:24:60.18:0,60,2142	0/0:11,0:9:21.02:0,21,934	0/0:15,0:14:30.09:0,30,1372	0/0:15,0:14:23.86:0,24,1333	0/0:35,0:34:64.76:0,65,3066	0/0:22,0:22:36.12:0,36,1881	0/0:18,0:18:39.12:0,39,1893	0/0:30,0:29:60.68:0,61,3258	0/0:30,0:29:57.20:0,57,3032	1/1:10,15:25:26.60:1127,27,0	1/1:13,14:26:3.03:1088,3,0	1/1:0,4:4:6.02:234,6,0
chr10	2589614	.	G	GTGTTTGTT	545.90	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-3.485;DP=514;FS=1.653;HRun=0;HaplotypeScore=123.6952;InbreedingCoeff=0.7464;MQ=74.24;MQ0=2;MQRankSum=-4.449;QD=34.12;ReadPosRankSum=-2.264;VQSLOD=2.8907;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,7:16:18.02:636,18,0	0/0:12,0:12:21.07:0,21,523	0/0:27,0:19:12.04:0,12,302	0/0:20,0:17:0.84:0,1,71	0/0:26,0:26:36.12:0,36,901	0/0:33,0:33:66.18:0,66,1509	0/0:14,0:14:24.05:0,24,573	0/0:26,0:26:27.09:0,27,627	0/0:16,0:16:33.11:0,33,831	0/0:18,0:19:39.13:0,39,913	0/0:17,0:17:15.05:0,15,378	0/0:16,0:16:33.10:0,33,777	0/0:11,0:11:21.06:0,21,478	0/0:16,0:17:18.06:0,18,434	0/0:22,0:23:48.13:0,48,1085	0/0:13,0:13:18.06:0,18,454	0/0:10,0:10:24.08:0,24,601	0/0:11,0:11:27.05:0,27,608	0/0:28,0:28:33.11:0,33,807	0/0:19,0:19:36.12:0,36,896	0/0:20,0:20:39.13:0,39,973	0/0:19,0:19:33.11:0,33,826	0/0:17,0:17:24.08:0,24,599	0/0:10,0:10:24.08:0,24,605	0/0:20,0:20:36.12:0,36,907	0/0:23,0:23:48.16:0,48,1197	0/0:18,0:17:27.09:0,27,680	0/0:13,0:13:30.10:0,30,756
chr10	2591222	.	CA	C	53.75	PASS	AC=8;AF=1.00;AN=8;DP=29;FS=0.000;HRun=1;HaplotypeScore=20.5419;MQ=22.06;MQ0=3;QD=4.13;VQSLOD=0.1146;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	1/1:0,2:2:5.98:46,6,0	./.	./.	1/1:3,4:6:0.47:1,0,0	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	1/1:0,2:2:3.46:25,3,0	./.	1/1:0,2:2:5.99:48,6,0	./.	./.	./.	./.	./.	./.
chr10	2591951	.	AG	A	1009.27	PASS	AB=1.000;AC=12;AF=0.214;AN=56;BaseQRankSum=3.699;DP=331;FS=4.861;HRun=3;HaplotypeScore=34.5452;InbreedingCoeff=0.6858;MQ=62.05;MQ0=15;MQRankSum=-0.837;QD=13.46;ReadPosRankSum=1.351;VQSLOD=2.2175;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:16,0:16:18.44:18,0,47	0/0:3,0:3:8.96:0,9,82	0/0:48,0:10:26.02:0,26,182	0/0:40,0:9:12.63:0,13,93	0/0:10,0:10:15.44:0,15,222	0/0:12,0:12:27.87:0,28,298	0/0:10,0:10:24.03:0,24,227	1/1:2,15:17:43.20:421,43,0	0/0:13,1:14:25.94:0,26,334	0/0:11,0:11:26.83:0,27,285	0/0:9,0:8:13.20:0,13,202	0/0:6,0:6:11.94:0,12,110	0/1:6,0:6:6.81:7,0,105	0/0:4,0:4:7.82:0,8,68	0/0:8,0:8:21.47:0,21,174	0/0:7,0:6:17.92:0,18,165	1/1:2,11:13:20.93:217,21,0	0/0:12,0:12:31.20:0,31,326	0/0:11,0:11:30.04:0,30,314	0/0:15,0:15:36.99:0,37,375	0/0:10,0:10:17.54:0,18,204	0/0:10,0:8:20.80:0,21,241	0/0:6,0:6:14.99:0,15,140	0/0:3,0:3:9.02:0,9,102	0/0:7,0:7:12.62:0,13,168	1/1:0,12:12:33.06:368,33,0	1/1:0,8:8:8.68:109,9,0	1/1:1,2:2:3.01:37,3,0
chr10	2595868	.	A	AAAAC	7856.33	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=-12.482;DP=573;FS=0.387;HRun=0;HaplotypeScore=90.6527;InbreedingCoeff=0.9308;MQ=72.66;MQ0=0;MQRankSum=-1.338;QD=48.80;ReadPosRankSum=-1.794;VQSLOD=5.1497;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,21:31:57.19:1428,57,0	0/0:11,0:11:33.11:0,33,590	0/0:21,0:18:38.87:0,39,509	0/1:12,0:9:3.07:3,0,95	0/0:26,0:26:66.20:0,66,1110	0/0:26,0:26:66.23:0,66,1186	0/0:13,0:13:36.10:0,36,592	1/1:8,19:28:46.19:1192,46,0	0/0:10,0:10:30.09:0,30,512	0/0:35,0:35:87.29:0,87,1499	0/0:20,0:20:54.15:0,54,886	0/0:18,0:18:42.14:0,42,742	0/0:14,0:14:39.13:0,39,688	0/0:12,0:12:33.10:0,33,566	0/0:23,0:23:63.19:0,63,1049	0/0:15,0:15:30.10:0,30,539	1/1:2,23:27:60.20:1507,60,0	0/0:12,0:11:29.92:0,30,486	0/0:27,0:27:63.20:0,63,1081	0/0:25,0:25:72.21:0,72,1184	0/0:8,0:8:24.07:0,24,404	0/0:21,0:21:60.18:0,60,998	0/0:34,0:34:99:0,102,1663	0/0:13,0:13:39.12:0,39,672	0/0:28,0:28:72.24:0,72,1246	1/1:2,29:31:84.26:1964,84,0	1/1:4,14:19:39.13:941,39,0	1/1:3,10:13:33.11:822,33,0
chr10	2597622	.	T	TG	2062.82	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-8.125;DP=558;FS=21.321;HRun=6;HaplotypeScore=55.4325;InbreedingCoeff=0.9981;MQ=79.10;MQ0=0;MQRankSum=-2.042;QD=25.47;ReadPosRankSum=1.693;VQSLOD=1.9468;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:81.14:0,81,811	0/0:8,0:8:21.05:0,21,214	0/0:23,0:23:53.83:0,54,477	0/0:18,0:17:33.07:0,33,332	0/0:22,0:22:63.14:0,63,642	0/0:22,0:22:63.14:0,63,643	0/0:21,0:21:51.10:0,51,515	1/1:4,13:17:27.09:340,27,0	0/0:24,0:24:63.14:0,63,642	0/0:18,0:18:49.35:0,49,493	0/0:15,0:15:36.07:0,36,361	0/0:27,0:27:72.16:0,72,734	0/0:15,0:15:39.09:0,39,398	0/0:27,0:27:75.17:0,75,765	0/0:23,0:23:57.11:0,57,574	0/0:17,0:17:48.11:0,48,490	0/0:17,0:17:48.11:0,48,490	0/0:18,0:18:45.08:0,45,452	0/0:22,0:22:48.10:0,48,489	0/0:17,0:17:42.09:0,42,428	0/0:11,0:11:27.02:0,27,264	0/0:19,0:19:54.12:0,54,551	0/0:16,0:16:39.09:0,39,398	0/0:25,0:25:75.17:0,75,764	0/0:19,0:19:45.06:0,45,444	1/1:4,21:25:54.17:679,54,0	1/1:3,19:22:57.18:714,57,0	1/1:2,15:17:39.12:491,39,0
chr10	2597694	.	TCTGCCTG	T	137.74	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.902;DP=549;FS=5.233;HRun=0;HaplotypeScore=126.0960;InbreedingCoeff=0.4522;MQ=77.01;MQ0=3;MQRankSum=-3.148;QD=5.30;ReadPosRankSum=-0.667;VQSLOD=2.0874;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:19,7:26:11.99:223,12,0	0/0:5,0:5:12.02:0,12,352	0/0:35,0:27:9.48:0,9,175	0/0:32,0:24:8.86:0,9,84	0/0:17,0:17:6.01:0,6,137	0/0:20,0:20:15.05:0,15,550	0/0:28,0:28:39.13:0,39,1380	0/0:15,0:15:21.07:0,21,550	0/0:21,0:21:42.11:0,42,1367	0/0:11,0:11:3.01:0,3,106	0/0:10,0:10:2.98:0,3,22	0/0:24,0:24:45.14:0,45,1557	0/0:15,0:15:30.10:0,30,1099	0/0:26,0:26:48.15:0,48,1672	0/0:15,0:15:24.08:0,24,854	0/0:14,0:14:30.06:0,30,845	0/0:25,0:25:36.12:0,36,1237	0/0:25,0:25:51.17:0,51,1758	0/0:19,0:19:18.05:0,18,576	0/0:8,0:8:3.01:0,3,110	0/0:32,0:32:69.21:0,69,2262	0/0:14,0:14:15.04:0,15,402	0/0:19,0:19:12.04:0,12,399	0/0:36,0:36:75.19:0,75,2581	0/0:13,0:13:12.03:0,12,298	0/0:16,0:16:9.03:0,9,266	0/0:13,0:20:39.11:0,39,941	0/0:8,0:8:8.96:0,9,118
chr10	2598463	.	A	ATATGAT	13579.27	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-8.741;DP=872;FS=0.341;HRun=0;HaplotypeScore=169.0375;InbreedingCoeff=0.9982;MQ=85.23;MQ0=1;MQRankSum=-16.818;QD=85.40;ReadPosRankSum=-1.406;VQSLOD=5.4113;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,12:22:44.04:1518,44,0	0/0:19,0:19:57.18:0,57,1301	0/0:33,0:33:87.10:0,87,1724	0/0:29,0:29:78.26:0,78,1683	0/0:32,0:32:90.27:0,90,2032	0/0:44,0:44:99:0,132,2911	0/0:21,0:20:57.18:0,57,1281	1/1:11,30:43:99:3835,114,0	0/0:40,0:40:99:0,117,2760	0/0:48,0:48:99:0,135,3098	0/0:24,0:24:72.23:0,72,1538	0/0:41,0:41:99:0,123,2775	0/0:33,0:33:99:0,99,2229	0/0:35,0:35:96.31:0,96,2181	0/0:44,0:44:99:0,129,3029	0/0:38,0:38:99:0,114,2645	1/1:5,8:13:30.10:1051,30,0	0/0:24,0:24:69.21:0,69,1582	0/0:13,0:13:33.11:0,33,728	0/0:39,0:39:99:0,108,2305	0/0:42,0:42:99:0,123,2724	0/0:33,0:33:93.32:0,93,2195	0/0:33,0:33:93.32:0,93,2178	0/0:31,0:31:84.25:0,84,1934	0/0:17,0:17:48.16:0,48,1135	1/1:3,27:33:93.32:3174,93,0	1/1:5,34:41:99:3362,99,0	1/1:0,6:6:18.06:640,18,0
chr10	2600088	.	GTC	G	245.03	PASS	AB=0.952;AC=4;AF=0.071;AN=56;BaseQRankSum=3.276;DP=680;FS=4.306;HRun=0;HaplotypeScore=104.3409;InbreedingCoeff=0.3646;MQ=49.38;MQ0=29;MQRankSum=-0.310;QD=3.40;ReadPosRankSum=-1.581;VQSLOD=1.8075;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:26:17.76:0,18,143	0/0:5,1:6:9.02:0,9,119	0/0:42,0:4:2.90:0,3,16	0/0:68,0:9:2.84:0,3,14	0/0:30,2:31:21.18:0,21,490	0/0:33,0:32:59.58:0,60,855	0/0:33,0:33:26.80:0,27,630	0/0:29,0:29:33.55:0,34,218	0/0:16,0:15:30.10:0,30,469	0/1:21,0:21:3.36:3,0,439	0/0:24,0:24:41.76:0,42,532	0/0:21,0:21:35.76:0,36,470	0/0:22,0:21:17.75:0,18,495	0/0:17,0:17:26.80:0,27,314	0/0:22,0:22:18.86:0,19,543	0/0:21,0:21:20.63:0,21,419	1/1:28,4:30:15.38:332,15,0	0/0:8,0:8:14.41:0,14,198	0/1:17,2:18:6.76:7,0,259	0/0:5,0:11:17.61:0,18,185	0/0:25,0:25:30.09:0,30,483	0/0:23,0:22:23.76:0,24,475	0/0:24,0:24:36.62:0,37,479	0/0:38,0:38:75.17:0,75,1145	0/0:21,0:21:37.23:0,37,446	0/0:18,0:17:22.15:0,22,164	0/0:18,0:16:20:0,20,169	0/0:8,0:7:2.78:0,3,25
chr10	2600094	.	C	CTG	1946.02	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=-4.871;DP=665;FS=7.031;HRun=0;HaplotypeScore=103.6943;InbreedingCoeff=0.7899;MQ=48.91;MQ0=30;MQRankSum=-4.915;QD=23.17;ReadPosRankSum=-2.988;VQSLOD=3.4629;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:25:13.05:0,13,125	0/0:7,0:7:9.02:0,9,116	0/0:39,0:4:8:0,8,52	0/0:64,0:9:20.88:0,21,166	0/0:29,0:28:65.47:0,65,736	0/0:35,0:34:87.46:0,87,1074	0/0:33,0:33:57.73:0,58,747	1/1:5,28:33:83.63:984,84,0	0/0:16,0:15:39.09:0,39,531	0/0:18,0:18:51.09:0,51,642	0/0:24,0:24:53.68:0,54,598	0/0:19,0:19:45.08:0,45,562	0/0:23,0:22:60.04:0,60,743	0/0:15,0:15:36.07:0,36,450	0/0:20,0:20:48.04:0,48,641	0/0:20,0:20:41.97:0,42,523	0/0:34,0:32:44.44:0,44,323	0/0:8,0:8:20.94:0,21,245	0/0:17,0:16:41.73:0,42,452	0/1:12,0:12:49.91:50,0,162	0/0:25,0:25:51.67:0,52,631	0/0:22,0:21:46:0,46,606	0/0:21,0:21:47.77:0,48,622	0/0:42,0:42:50.41:0,50,1187	0/0:23,0:23:54.08:0,54,629	1/1:3,11:13:5.63:476,6,0	1/1:11,4:13:12.20:355,12,0	1/1:7,1:7:20.99:237,21,0
chr10	2601942	.	AT	A	1822.04	PASS	AB=0.944;AC=14;AF=0.250;AN=56;BaseQRankSum=10.502;DP=342;FS=11.625;HRun=11;HaplotypeScore=38.5958;InbreedingCoeff=0.7764;MQ=69.07;MQ0=5;MQRankSum=-0.710;QD=13.40;ReadPosRankSum=1.819;VQSLOD=2.0655;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:20:19.19:67,19,0	0/0:5,0:5:12.03:0,12,128	0/0:10,0:5:4.23:0,4,61	0/1:9,0:5:0.77:1,0,14	0/0:15,0:15:42.10:0,42,443	0/0:22,0:22:48.11:0,48,505	0/0:7,0:7:21.01:0,21,212	1/1:5,20:25:56.89:465,57,0	0/0:7,0:7:18.05:0,18,192	0/0:18,0:18:48.12:0,48,512	0/0:12,0:12:21.03:0,21,210	0/0:7,0:7:15.04:0,15,160	0/0:9,0:9:27.04:0,27,278	0/1:7,1:8:6.60:7,0,142	0/0:7,0:7:15.04:0,15,160	0/0:5,0:5:12.03:0,12,128	1/1:0,17:19:52.02:406,52,0	0/0:14,0:14:36.07:0,36,375	0/0:26,0:26:60.14:0,60,633	0/0:8,0:8:15.02:0,15,152	0/0:5,0:5:12.03:0,12,128	0/0:3,0:3:6.02:0,6,64	0/0:8,0:8:18.05:0,18,192	0/0:4,0:4:6.02:0,6,64	0/0:13,1:14:14.44:0,14,352	1/1:3,17:20:50.94:419,51,0	1/1:3,20:23:50.94:419,51,0	1/1:1,9:12:27.91:223,28,0
chr10	2603409	.	A	AG	502.06	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=-1.442;DP=525;FS=6.449;HRun=9;HaplotypeScore=56.7763;InbreedingCoeff=0.7688;MQ=72.43;MQ0=0;MQRankSum=0.641;QD=8.23;ReadPosRankSum=-4.135;VQSLOD=0.5940;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:15.80:0,16,88	0/0:7,0:7:20.87:0,21,172	0/1:16,0:14:21.52:22,0,50	0/0:13,0:10:18.43:0,18,139	0/0:27,0:27:71.95:0,72,618	0/0:25,1:26:39.25:0,39,559	0/0:14,0:14:41.98:0,42,360	1/1:10,17:27:45.08:480,45,0	0/0:18,0:18:47.97:0,48,413	0/0:22,0:22:56.98:0,57,493	0/0:15,0:16:41.01:0,41,340	0/0:20,0:20:44.97:0,45,390	0/0:11,0:11:20.97:0,21,178	0/0:21,0:21:47.98:0,48,416	0/0:20,0:20:47.97:0,48,417	0/0:15,0:15:41.99:0,42,365	1/1:4,2:18:23:130,23,0	0/0:7,0:7:21:0,21,182	0/0:18,0:19:41.02:0,41,345	0/0:22,0:22:47.96:0,48,413	0/0:14,0:14:35.98:0,36,308	0/0:24,0:25:61.97:0,62,517	0/0:30,0:30:80.85:0,81,692	0/0:15,0:15:44.99:0,45,391	0/0:19,0:19:41.99:0,42,364	0/0:19,0:20:47.01:0,47,395	0/0:32,0:31:80.96:0,81,703	0/0:21,0:21:59.98:0,60,521
chr10	2604130	.	AC	A	198.56	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.790;DP=475;FS=15.555;HRun=1;HaplotypeScore=64.0767;InbreedingCoeff=0.8346;MQ=65.78;MQ0=5;MQRankSum=-4.670;QD=13.24;ReadPosRankSum=-1.311;VQSLOD=0.9417;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:24.08:0,24,353	0/0:4,0:4:11.63:0,12,152	0/0:29,0:15:8.56:0,9,322	0/0:26,0:16:20.64:0,21,295	0/0:26,0:26:68.49:0,68,997	0/0:17,0:17:48.14:0,48,711	0/0:18,0:17:21.83:0,22,523	0/0:35,0:35:80.03:0,80,1285	0/0:16,0:16:36.17:0,36,648	0/0:25,0:25:64.86:0,65,961	0/0:11,0:11:21.01:0,21,325	0/0:13,0:13:14.26:0,14,431	0/0:8,0:8:21.03:0,21,269	0/0:8,0:8:20.50:0,21,263	0/0:16,0:16:28.85:0,29,550	0/0:20,0:20:56.88:0,57,777	1/1:3,12:15:36.56:293,37,0	0/0:18,0:18:51.09:0,51,734	0/0:8,0:8:24.06:0,24,338	0/0:24,0:24:69.55:0,70,965	0/0:9,0:9:9.40:0,9,298	0/0:20,0:20:50.20:0,50,690	0/0:13,0:13:33.04:0,33,486	0/0:17,0:17:35.94:0,36,513	0/0:19,0:18:37.56:0,38,704	0/0:13,0:13:35.79:0,36,509	0/0:20,0:19:51.87:0,52,772	0/0:17,0:17:48.15:0,48,729
chr10	2604483	.	T	TTTTC	694.38	PASS	AC=8;AF=0.167;AN=48;BaseQRankSum=-1.788;DP=502;FS=2.400;HRun=0;HaplotypeScore=93.5155;InbreedingCoeff=0.8399;MQ=59.90;MQ0=4;MQRankSum=-2.370;QD=9.02;ReadPosRankSum=-0.516;VQSLOD=2.5463;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:10,8:18:9.03:178,9,0	0/0:5,0:5:6.02:0,6,92	./.	./.	0/0:24,0:24:24.61:0,25,390	0/0:17,0:17:24.08:0,24,366	0/0:9,0:9:9.03:0,9,134	./.	0/0:19,0:19:33.09:0,33,484	0/0:21,0:20:21.07:0,21,321	0/0:17,0:18:17.79:0,18,220	0/0:25,0:25:35.97:0,36,499	0/0:18,0:18:24.08:0,24,367	0/0:19,0:19:21.07:0,21,322	0/0:24,0:24:33.11:0,33,504	0/0:17,0:17:27.08:0,27,394	1/1:16,0:22:6.02:93,6,0	1/1:10,11:21:15.05:350,15,0	0/0:26,0:26:15.05:0,15,223	0/0:17,0:17:15.04:0,15,208	1/1:11,4:14:9.03:210,9,0	0/0:12,0:12:12.04:0,12,178	0/0:5,0:10:9.01:0,9,84	0/0:6,0:17:24.03:0,24,228	0/0:11,0:11:17.79:0,18,224	0/0:12,0:17:16.26:0,16,142	0/0:22,0:31:26.84:0,27,228	./.
chr10	2604549	.	GTGT	G	2281.29	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=9.648;DP=491;FS=2.428;HRun=0;HaplotypeScore=81.1269;InbreedingCoeff=0.9619;MQ=70.61;MQ0=1;MQRankSum=-1.405;QD=30.42;ReadPosRankSum=-0.136;VQSLOD=3.4038;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:48.09:0,48,852	0/0:8,0:8:24.08:0,24,519	0/0:19,0:18:22.67:0,23,544	0/0:27,0:23:41.77:0,42,851	0/0:23,0:23:63.18:0,63,1300	0/0:14,0:14:36.10:0,36,718	0/0:19,0:19:57.16:0,57,1015	1/1:3,28:30:69.24:1071,69,0	0/0:20,0:20:54.11:0,54,921	0/0:18,0:17:48.14:0,48,930	0/0:15,0:15:42.13:0,42,878	0/0:17,0:17:48.15:0,48,994	0/0:16,0:16:48.15:0,48,992	0/0:15,0:14:39.12:0,39,746	0/0:18,0:18:45.12:0,45,902	0/0:22,0:22:60.19:0,60,1261	0/0:17,0:16:14.86:0,15,600	0/0:18,0:18:42.13:0,42,828	0/0:16,0:16:48.12:0,48,886	0/0:15,0:15:45.15:0,45,985	0/0:20,0:20:57.20:0,57,1150	0/0:16,0:16:42.13:0,42,881	0/0:15,0:15:39.13:0,39,809	0/0:22,0:22:48.04:0,48,870	0/0:6,0:6:17.99:0,18,349	1/1:2,13:15:41.96:608,42,0	1/1:3,15:18:44.94:658,45,0	1/1:0,11:11:6.02:98,6,0
chr10	2604689	.	C	CTCT	1610.45	PASS	AB=0.941;AC=36;AF=0.720;AN=50;BaseQRankSum=0.902;DP=385;FS=7.925;HRun=0;HaplotypeScore=71.5553;InbreedingCoeff=0.2361;MQ=56.26;MQ0=20;MQRankSum=-1.007;QD=5.10;ReadPosRankSum=-0.397;VQSLOD=0.5721;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:14:13.41:80,13,0	0/1:8,0:8:0.98:68,0,1	./.	./.	1/1:6,5:11:10.19:101,10,0	0/0:8,0:7:12:0,12,139	0/1:17,0:17:3.96:4,0,87	1/1:25,0:23:14.71:91,15,0	1/1:6,0:6:12.04:211,12,0	1/1:16,2:17:8.77:127,9,0	1/1:9,0:14:7.44:40,7,0	1/1:12,8:18:9.03:173,9,0	0/1:3,7:9:0.01:0,0,0	1/1:8,1:7:3.23:81,3,0	0/0:10,0:10:15.05:0,15,194	0/1:14,1:15:1.84:215,0,2	1/1:11,0:10:2.80:13,3,0	0/1:18,0:18:21.66:34,0,22	./.	0/1:16,0:15:14.92:15,0,30	1/1:11,1:11:3.01:55,3,0	1/1:13,0:12:9.39:89,9,0	0/1:16,0:15:13.29:44,0,13	0/1:21,0:21:2.84:14,0,3	0/0:16,0:14:8.23:0,8,116	1/1:19,0:18:15:134,15,0	1/1:9,0:9:5.99:50,6,0	1/1:9,0:9:9.02:117,9,0
chr10	2604725	.	T	TTCT	1600.97	PASS	AB=1.000;AC=37;AF=0.712;AN=52;BaseQRankSum=1.160;DP=228;FS=7.304;HRun=0;HaplotypeScore=50.8534;InbreedingCoeff=0.2357;MQ=39.68;MQ0=32;MQRankSum=-0.882;QD=7.97;ReadPosRankSum=-2.168;VQSLOD=0.2674;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:10:13.88:80,14,0	0/1:6,0:6:0.98:68,0,1	./.	./.	1/1:7,0:6:10.19:101,10,0	0/0:6,0:6:12:0,12,139	0/1:9,0:8:3.96:4,0,87	1/1:29,0:16:9.07:55,9,0	1/1:7,0:7:14.98:229,15,0	1/1:8,0:5:6.02:115,6,0	1/1:7,0:8:7.44:40,7,0	1/1:14,0:11:9.03:173,9,0	0/1:8,0:6:0.01:0,0,0	1/1:8,0:5:3.23:81,3,0	0/0:7,0:7:15.05:0,15,194	0/1:6,0:6:1.84:215,0,2	0/1:4,0:3:0:0,0,0	0/1:10,0:10:18.70:51,0,19	1/1:11,0:3:2.88:15,3,0	0/1:8,0:7:14.97:15,0,30	1/1:7,0:5:3.01:55,3,0	1/1:2,4:6:9.39:89,9,0	0/1:7,0:7:13.29:44,0,13	0/1:8,0:8:3.02:14,0,3	0/0:9,0:7:7.94:0,8,116	1/1:9,0:8:15:134,15,0	1/1:2,0:2:5.99:50,6,0	1/1:4,0:4:9.02:117,9,0
chr10	2604728	.	TTCC	T	365.94	PASS	AB=0.917;AC=20;AF=0.385;AN=52;BaseQRankSum=-1.004;DP=208;FS=0.000;HRun=0;HaplotypeScore=48.8018;InbreedingCoeff=0.1154;MQ=39.64;MQ0=29;MQRankSum=2.734;QD=3.30;ReadPosRankSum=-5.707;VQSLOD=-0.2144;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:10:5.66:32,6,0	0/1:6,0:6:11.92:12,0,112	./.	./.	0/1:7,0:6:4.15:33,0,4	0/0:6,0:6:12.04:0,12,188	0/0:9,0:8:12.03:0,12,179	0/0:24,0:14:0.80:0,1,156	0/1:1,5:6:57.06:78,0,57	0/0:7,0:4:8.76:0,9,104	0/1:7,0:7:0.60:47,0,1	0/0:11,0:9:11.81:0,12,98	0/1:8,0:6:0:0,0,0	0/1:7,0:4:24.18:40,0,24	0/0:7,0:7:15.04:0,15,205	0/1:2,3:5:19.53:52,0,20	0/0:3,0:2:2.98:0,3,21	0/1:8,0:8:3.24:3,0,23	0/0:11,0:3:5.88:0,6,47	0/1:7,0:6:4.43:23,0,4	1/1:6,0:4:2.70:34,3,0	1/1:8,0:6:4.96:36,5,0	1/1:7,0:7:6.70:54,7,0	1/1:8,0:8:0.47:1,0,0	0/0:9,0:7:14.54:0,15,209	0/1:8,0:7:23.50:64,0,24	0/0:2,0:2:0.33:0,0,0	0/0:3,0:3:5.86:0,6,34
chr10	2604750	.	T	TC	758.86	PASS	AC=26;AF=0.929;AN=28;BaseQRankSum=-0.485;DP=82;FS=0.000;HRun=2;HaplotypeScore=18.9728;InbreedingCoeff=0.1300;MQ=27.79;MQ0=14;MQRankSum=1.456;QD=15.18;ReadPosRankSum=1.595;VQSLOD=3.1364;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	1/1:2,3:5:6.02:85,6,0	./.	./.	./.	1/1:0,2:2:3.01:45,3,0	1/1:0,4:3:6.01:73,6,0	1/1:3,3:4:12.04:154,12,0	1/1:2,1:3:6.02:74,6,0	1/1:2,3:3:9.03:131,9,0	./.	1/1:3,5:6:6.02:82,6,0	./.	1/1:2,2:1:2.99:23,3,0	./.	1/1:4,0:3:3.87:25,4,0	1/1:1,1:1:3:25,3,0	./.	1/1:1,1:1:3.01:44,3,0	./.	./.	0/0:2,0:2:2.98:0,3,22	./.	./.	1/1:1,2:2:3.01:30,3,0	./.	./.	1/1:1,1:2:5.98:52,6,0
chr10	2606736	.	C	CTT	7238.12	PASS	AB=0.525;AC=11;AF=0.196;AN=56;BaseQRankSum=-12.314;DP=655;FS=4.419;HRun=0;HaplotypeScore=80.3474;InbreedingCoeff=0.8868;MQ=76.12;MQ0=0;MQRankSum=-3.095;QD=54.02;ReadPosRankSum=0.179;VQSLOD=4.9772;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,23:26:75.04:1429,75,0	0/0:16,0:16:48.15:0,48,755	0/0:32,0:32:91.81:0,92,1382	0/0:18,0:18:51.17:0,51,795	0/0:18,0:18:45.14:0,45,706	0/0:19,0:19:45.14:0,45,709	0/0:20,0:20:60.18:0,60,949	1/1:3,21:25:66.21:1290,66,0	0/0:26,0:26:78.27:0,78,1272	0/0:27,0:26:81.26:0,81,1263	0/0:21,0:21:60.18:0,60,923	0/0:33,0:33:96.31:0,96,1539	0/0:23,0:23:69.22:0,69,1101	0/0:27,0:27:78.27:0,78,1273	0/0:21,0:21:57.19:0,57,927	0/0:28,0:28:84.29:0,84,1371	1/1:1,23:24:66.23:1337,66,0	0/0:13,0:13:39.09:0,39,581	0/0:21,0:21:60.20:0,60,970	0/0:36,0:36:99:0,102,1612	0/0:25,0:25:75.25:0,75,1197	0/0:21,0:21:54.18:0,54,879	0/0:27,0:27:75.26:0,75,1223	0/0:22,0:22:66.18:0,66,1041	0/0:27,0:27:81.24:0,81,1251	0/1:2,18:21:37.73:995,0,38	1/1:1,25:26:75.26:1516,75,0	1/1:0,11:12:33.11:671,33,0
chr10	2608665	.	AT	A	3646.61	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=11.529;DP=637;FS=0.404;HRun=2;HaplotypeScore=62.1331;InbreedingCoeff=0.9952;MQ=80.64;MQ0=0;MQRankSum=-2.501;QD=38.39;ReadPosRankSum=-2.204;VQSLOD=3.2900;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:87.29:0,87,1300	0/0:13,0:13:39.13:0,39,584	0/0:20,0:20:50.97:0,51,610	0/0:16,0:16:36.46:0,36,481	0/0:23,0:23:69.23:0,69,1028	0/0:35,0:35:99:0,105,1572	0/0:27,0:27:81.25:0,81,1175	1/1:1,37:38:99:1427,111,0	0/0:16,0:16:48.16:0,48,719	0/0:35,0:35:99:0,105,1555	0/0:27,0:27:81.23:0,81,1169	0/0:9,0:9:27.09:0,27,404	0/0:16,0:16:48.15:0,48,698	0/0:22,0:22:66.22:0,66,989	0/0:17,0:17:51.17:0,51,764	0/0:16,0:16:48.16:0,48,719	0/0:16,0:16:48.15:0,48,698	0/0:16,0:16:45.15:0,45,674	0/0:19,0:19:57.19:0,57,853	0/0:43,0:43:99:0,126,1828	0/0:34,0:34:99:0,102,1489	0/0:20,0:20:57.18:0,57,836	0/0:23,0:23:66.21:0,66,969	0/0:26,0:26:75.25:0,75,1124	0/0:23,0:23:66.21:0,66,952	1/1:0,14:14:42.14:545,42,0	1/1:0,38:38:99:1480,114,0	1/1:0,5:5:15.05:195,15,0
chr10	2609517	.	TCA	T	567.84	PASS	AB=0.901;AC=8;AF=0.143;AN=56;BaseQRankSum=5.002;DP=618;FS=1.408;HRun=0;HaplotypeScore=96.7229;InbreedingCoeff=0.1242;MQ=66.82;MQ0=12;MQRankSum=0.410;QD=3.64;ReadPosRankSum=-0.090;VQSLOD=1.9714;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:24:11.71:0,12,86	0/0:11,0:11:33.11:0,33,515	0/1:41,0:11:0.97:1,0,12	0/0:37,0:15:6.46:0,6,25	0/0:20,0:20:60.20:0,60,938	0/1:13,2:16:44.99:45,0,408	0/0:21,0:21:51.16:0,51,775	0/0:38,0:37:40.04:0,40,335	0/0:26,2:28:22.20:0,22,791	0/0:20,1:21:18.75:0,19,689	0/0:13,0:13:33.11:0,33,517	0/1:20,2:22:20.77:21,0,652	0/0:17,0:17:23.60:0,24,667	0/0:27,1:28:25.21:0,25,856	0/0:33,0:33:72.06:0,72,1071	0/0:21,0:22:48.15:0,48,725	0/0:19,0:24:11.56:0,12,98	0/1:4,1:5:19.95:20,0,173	0/0:16,1:18:0.53:0,1,373	0/1:21,2:23:3.77:4,0,874	0/1:23,3:25:83.23:83,0,599	0/0:18,0:18:33.11:0,33,515	0/0:25,0:25:60.15:0,60,928	0/0:17,0:17:35.20:0,35,623	1/1:5,18:23:45.13:525,45,0	0/0:12,0:12:26.88:0,27,241	0/0:24,0:28:44.64:0,45,421	0/0:3,0:3:8.97:0,9,72
chr10	2609544	.	A	AGT	2241.82	PASS	AB=0.611;AC=7;AF=0.125;AN=56;BaseQRankSum=-3.553;DP=707;FS=24.833;HRun=0;HaplotypeScore=102.1071;InbreedingCoeff=0.7820;MQ=61.19;MQ0=12;MQRankSum=-2.288;QD=27.34;ReadPosRankSum=-3.913;VQSLOD=1.6396;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:60.02:0,60,676	0/0:16,0:16:42.61:0,43,530	0/0:68,0:13:21:0,21,197	0/0:47,0:10:0.14:0,0,31	0/0:33,0:33:81.24:0,81,1000	0/0:22,0:22:57.15:0,57,685	0/0:23,0:23:60.18:0,60,737	1/1:7,26:33:72.50:1098,73,0	0/0:23,0:23:60.19:0,60,747	0/0:25,0:25:62.85:0,63,754	0/0:20,0:20:45.13:0,45,543	0/0:30,0:30:75.20:0,75,979	0/0:23,0:23:63.20:0,63,793	0/0:21,0:21:57.18:0,57,718	0/0:33,0:33:84.24:0,84,1024	0/0:23,0:23:63.15:0,63,760	0/0:16,0:16:36.06:0,36,419	0/0:5,0:5:15.05:0,15,189	0/0:25,0:25:42.12:0,42,515	0/0:37,0:37:93.29:0,93,1165	0/0:28,0:28:69.19:0,69,836	0/0:18,0:18:48.13:0,48,582	0/0:26,0:26:54.62:0,55,657	0/0:18,0:18:42.09:0,42,508	0/0:23,0:23:51.16:0,51,641	0/1:4,6:10:7.77:400,0,8	1/1:8,17:30:47.85:689,48,0	1/1:0,4:6:12.93:200,13,0
chr10	2610854	.	A	AT	801.35	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-3.971;DP=470;FS=7.590;HRun=9;HaplotypeScore=43.6248;InbreedingCoeff=0.7459;MQ=66.60;MQ0=4;MQRankSum=0.555;QD=22.26;ReadPosRankSum=2.933;VQSLOD=4.2674;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:86.97:0,87,755	0/0:5,0:5:15:0,15,130	0/0:10,0:7:11.87:0,12,93	0/0:8,0:6:8.99:0,9,78	0/0:20,1:21:23.80:0,24,435	0/0:21,0:21:53.97:0,54,469	0/0:12,0:12:35.99:0,36,313	0/0:24,0:24:65.96:0,66,567	0/0:11,0:11:32.99:0,33,286	0/0:24,0:24:59.96:0,60,515	0/0:14,0:14:32.97:0,33,283	0/0:13,0:13:29.96:0,30,253	0/0:22,0:22:56.98:0,57,494	0/0:17,0:17:44.98:0,45,390	0/0:15,0:15:41.99:0,42,365	0/0:16,0:16:41.95:0,42,361	1/1:4,32:35:81.22:896,81,0	0/0:14,0:14:10.82:0,11,238	0/0:23,0:24:58.98:0,59,494	0/0:21,0:21:55.78:0,56,474	0/0:6,0:6:18:0,18,156	0/0:15,0:15:41.95:0,42,355	0/0:14,0:14:38.96:0,39,331	0/0:20,0:20:50.94:0,51,438	0/0:12,0:12:23.98:0,24,208	0/0:15,0:15:44.99:0,45,391	0/0:28,0:28:71.94:0,72,620	0/0:1,0:1:3:0,3,26
chr10	2610957	.	AT	A	2357.27	PASS	AB=0.556;AC=9;AF=0.161;AN=56;BaseQRankSum=11.071;DP=448;FS=1.481;HRun=6;HaplotypeScore=40.9791;InbreedingCoeff=0.8084;MQ=67.50;MQ0=5;MQRankSum=-0.591;QD=24.05;ReadPosRankSum=-1.061;VQSLOD=2.4620;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,27:29:75.19:806,75,0	0/0:12,0:12:36.12:0,36,474	0/0:5,0:5:6.02:0,6,79	0/0:10,0:7:15.05:0,15,192	0/0:23,0:23:60.17:0,60,757	0/0:24,0:24:69.21:0,69,892	0/0:14,0:14:39.13:0,39,513	1/1:2,17:18:51.11:540,51,0	0/0:13,0:13:39.13:0,39,513	0/0:22,0:22:63.20:0,63,829	0/0:30,0:30:87.27:0,87,1126	0/0:9,0:9:27.03:0,27,320	0/0:13,0:13:39.13:0,39,513	0/0:10,0:10:30.10:0,30,394	0/0:13,0:13:39.11:0,39,498	0/0:7,0:7:18.06:0,18,237	0/0:30,0:30:78.20:0,78,969	0/0:18,0:18:31.52:0,32,609	0/0:21,0:20:54.16:0,54,694	0/0:21,0:21:60.18:0,60,775	0/0:11,0:11:33.11:0,33,434	0/0:10,0:10:30.08:0,30,380	0/0:10,0:10:27.08:0,27,342	0/0:11,0:11:33.11:0,33,434	0/0:13,0:12:36.12:0,36,473	0/1:4,16:20:61.35:429,0,61	1/1:3,24:25:63.16:677,63,0	1/1:0,3:3:6.02:64,6,0
chr10	2612116	.	TA	T	956.85	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.415;DP=625;FS=9.255;HRun=2;HaplotypeScore=59.5877;InbreedingCoeff=0.9987;MQ=90.46;MQ0=0;MQRankSum=-3.747;QD=34.17;ReadPosRankSum=2.545;VQSLOD=3.5257;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,28:28:81.26:1052,81,0	0/0:12,0:12:36.12:0,36,535	0/0:23,0:23:66.22:0,66,971	0/0:25,0:25:69.67:0,70,982	0/0:16,0:16:48.16:0,48,716	0/0:20,0:20:60.20:0,60,899	0/0:23,0:23:69.20:0,69,990	0/0:34,0:34:99:0,99,1484	0/0:26,0:26:78.24:0,78,1126	0/0:22,0:22:66.22:0,66,986	0/0:19,0:19:57.18:0,57,834	0/0:28,0:28:84.28:0,84,1259	0/0:34,0:34:99:0,102,1487	0/0:29,0:29:81.25:0,81,1173	0/0:32,0:32:93.30:0,93,1373	0/0:31,0:31:93.29:0,93,1366	0/0:24,0:23:69.18:0,69,988	0/0:14,0:14:39.13:0,39,584	0/0:17,0:17:51.14:0,51,736	0/0:16,0:16:48.16:0,48,718	0/0:30,0:30:84.25:0,84,1218	0/0:17,0:17:51.17:0,51,760	0/0:14,0:14:42.14:0,42,630	0/0:24,0:24:72.24:0,72,1079	0/0:13,0:13:39.13:0,39,585	0/0:21,0:20:63.21:0,63,927	0/0:24,0:23:72.23:0,72,1054	0/0:9,0:9:27.09:0,27,405
chr10	2613140	.	TC	T	1073	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.271;DP=684;FS=5.796;HRun=2;HaplotypeScore=65.3572;InbreedingCoeff=0.9975;MQ=83.27;MQ0=0;MQRankSum=-5.985;QD=32.52;ReadPosRankSum=1.522;VQSLOD=3.5685;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,32:33:90.29:1168,90,0	0/0:10,0:10:30.10:0,30,449	0/0:34,0:34:93.41:0,93,1274	0/0:30,0:31:86.41:0,86,1171	0/0:9,0:9:27.06:0,27,353	0/0:31,0:31:93.28:0,93,1352	0/0:26,0:26:69.22:0,69,996	0/0:43,0:43:99:0,123,1801	0/0:29,0:29:87.29:0,87,1299	0/0:12,0:12:36.12:0,36,523	0/0:10,0:10:30.10:0,30,449	0/0:32,0:32:96.31:0,96,1417	0/0:26,0:26:72.24:0,72,1078	0/0:40,0:40:99:0,114,1642	0/0:30,0:30:90.29:0,90,1316	0/0:21,0:21:63.21:0,63,944	0/0:42,0:42:99:0,117,1690	0/0:15,0:14:45.15:0,45,674	0/0:25,0:25:69.18:0,69,924	0/0:13,0:13:39.10:0,39,542	0/0:36,0:36:99:0,108,1616	0/0:15,0:15:45.15:0,45,674	0/0:12,0:12:36.11:0,36,519	0/0:38,0:38:99:0,108,1591	0/0:15,0:15:45.14:0,45,654	0/0:16,0:16:48.16:0,48,718	0/0:27,0:27:81.26:0,81,1185	0/0:13,0:13:39.11:0,39,561
chr10	2613444	.	GTC	G	1973.48	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=11.350;DP=780;FS=12.844;HRun=0;HaplotypeScore=135.2028;InbreedingCoeff=0.3468;MQ=58.08;MQ0=40;MQRankSum=-0.974;QD=4.98;ReadPosRankSum=-2.858;VQSLOD=1.9731;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:57,3:60:99:866,102,0	0/0:8,0:8:17.96:0,18,242	0/1:38,0:16:23.94:24,0,80	0/1:45,0:14:32.66:33,0,65	0/0:28,0:26:7.99:0,8,338	0/0:29,0:29:9.09:0,9,664	0/1:25,0:24:27.34:27,0,351	1/1:37,0:35:35.13:345,35,0	0/0:30,0:29:47.95:0,48,893	0/0:26,0:24:13.89:0,14,618	0/0:23,0:23:36.27:0,36,618	0/0:35,0:34:61.04:0,61,851	0/0:22,0:21:26.46:0,26,615	0/1:30,0:29:1.71:2,0,556	0/0:28,0:28:32.12:0,32,670	0/0:20,0:19:41.63:0,42,593	0/1:21,0:20:42.90:43,0,275	0/0:22,0:22:15.36:0,15,384	0/0:27,0:26:1.56:0,2,419	0/0:13,0:13:17.86:0,18,277	0/1:58,0:57:22.38:22,0,1000	0/1:21,0:21:16.51:17,0,329	0/0:19,0:15:29.83:0,30,286	0/0:37,0:36:69.16:0,69,1088	0/0:17,0:17:9.64:0,10,348	1/1:30,2:30:25.58:488,26,0	1/1:12,7:19:21.67:230,22,0	1/1:6,0:7:3.21:57,3,0
chr10	2613446	.	CTG	C	255.27	PASS	AB=0.963;AC=15;AF=0.288;AN=52;BaseQRankSum=4.857;DP=789;FS=0.583;HRun=0;HaplotypeScore=143.4241;InbreedingCoeff=-0.2730;MQ=56.31;MQ0=41;MQRankSum=-0.733;QD=0.62;ReadPosRankSum=0.260;VQSLOD=2.3056;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:61,0:61:26.62:27,0,55	0/0:8,0:8:13.26:0,13,152	./.	./.	0/1:26,1:26:30.25:30,0,222	0/1:28,1:29:49.72:50,0,466	0/1:24,1:24:13.82:14,0,284	1/1:37,0:34:14.81:66,15,0	0/0:30,0:29:26.05:0,26,691	0/0:27,0:25:2.35:0,2,373	0/0:23,0:23:10.25:0,10,459	0/0:35,0:34:36.56:0,37,481	0/0:20,2:21:2.36:0,2,416	0/1:28,2:29:82.13:82,0,348	0/0:28,1:29:33.24:0,33,412	0/0:18,3:20:8.47:0,8,532	0/0:23,0:22:14.94:0,15,153	0/1:19,5:24:28.27:28,0,229	0/0:26,0:25:0.82:0,1,126	0/1:14,0:14:18.57:19,0,166	0/1:60,1:61:15.62:16,0,597	0/1:22,0:22:28.60:29,0,223	0/0:18,1:15:15.05:0,15,217	0/1:37,1:37:19.22:19,0,759	0/1:16,1:17:4.03:4,0,263	0/0:33,0:31:3.32:0,3,133	0/1:20,0:20:14.75:15,0,29	0/1:6,0:7:3.59:4,0,49
chr10	2613468	.	GTGTGTGTGTGTGTC	G	1967.55	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=11.662;DP=743;FS=4.727;HRun=0;HaplotypeScore=282.1197;InbreedingCoeff=0.5944;MQ=52.38;MQ0=31;MQRankSum=-2.857;QD=10.58;ReadPosRankSum=-3.522;VQSLOD=1.0987;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:64,0:64:99:177,0,509	0/0:7,0:7:15.05:0,15,540	0/0:15,0:5:8.67:0,9,48	0/0:26,0:5:8.99:0,9,81	0/0:25,0:23:44.70:0,45,1279	0/0:28,0:28:73.85:0,74,2821	0/0:29,0:28:63.17:0,63,1448	1/1:11,30:39:89.56:742,90,0	0/0:30,0:29:75.21:0,75,2769	0/0:24,0:22:60.19:0,60,1723	0/0:25,0:25:69.12:0,69,2293	0/0:30,0:29:63.05:0,63,1855	0/0:16,0:15:39.13:0,39,1531	0/0:30,0:30:75.15:0,75,2198	0/0:27,0:27:60.12:0,60,1908	0/0:22,0:21:54.16:0,54,2321	0/1:22,0:20:68.01:68,0,181	0/0:24,0:24:51.05:0,51,1314	0/0:27,0:25:71.87:0,72,1204	0/0:21,0:21:48.01:0,48,1138	0/0:56,0:55:99:0,111,3328	0/0:23,0:23:60.56:0,61,1439	0/0:23,0:20:33.93:0,34,994	0/0:33,0:32:74.23:0,74,3606	0/0:16,0:16:36.12:0,36,1219	1/1:32,0:30:9.58:730,10,0	1/1:18,0:18:10.32:265,10,0	0/1:9,0:8:4.01:137,0,4
chr10	2613480	.	GTC	G	2027.06	PASS	AB=1.000;AC=10;AF=0.179;AN=56;BaseQRankSum=14.219;DP=697;FS=0.764;HRun=0;HaplotypeScore=134.0005;InbreedingCoeff=0.7225;MQ=54.93;MQ0=22;MQRankSum=-3.520;QD=12.75;ReadPosRankSum=-0.411;VQSLOD=3.5742;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:58,0:58:89.03:722,89,0	0/1:7,0:7:18.03:18,0,155	0/0:14,0:8:20.51:0,21,141	0/0:23,0:8:9.99:0,10,113	0/0:20,0:18:10.19:0,10,458	0/0:23,0:23:25.90:0,26,828	0/0:30,0:30:50.13:0,50,708	1/1:35,0:33:96.87:732,97,0	0/0:26,0:26:49.28:0,49,907	0/0:27,0:25:28.28:0,28,788	0/0:22,0:22:45.81:0,46,774	0/0:26,0:25:54.46:0,54,783	0/0:17,0:16:23.21:0,23,508	0/0:24,0:24:18.16:0,18,588	0/0:26,1:27:65.92:0,66,841	0/0:26,0:25:59.02:0,59,959	0/0:22,0:20:38.62:0,39,312	0/0:26,0:26:26.11:0,26,492	0/0:23,0:20:35.73:0,36,430	0/0:15,0:15:18.99:0,19,382	0/0:44,0:43:79.67:0,80,1069	0/0:20,0:19:32.46:0,32,486	0/0:23,0:21:36.83:0,37,531	0/0:40,0:39:65.02:0,65,1329	0/0:20,0:20:31.04:0,31,495	1/1:31,1:31:18.03:489,18,0	1/1:11,6:17:10.85:167,11,0	0/1:10,0:9:25.39:64,0,25
chr10	2614978	.	A	AT	1140.13	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-5.854;DP=626;FS=11.129;HRun=1;HaplotypeScore=68.7838;InbreedingCoeff=0.8209;MQ=59.55;MQ0=18;MQRankSum=0.970;QD=31.67;ReadPosRankSum=3.494;VQSLOD=2.2064;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,31:36:31.40:1235,31,0	0/0:5,0:5:15.01:0,15,174	0/0:18,0:1:3.01:0,3,42	0/0:17,0:5:14.70:0,15,154	0/0:28,0:28:81.24:0,81,1086	0/0:21,0:21:63.18:0,63,831	0/0:18,0:18:54.14:0,54,705	0/0:32,0:31:93.30:0,93,1282	0/0:23,0:23:66.68:0,67,908	0/0:36,0:36:99:0,108,1479	0/0:16,0:16:48.15:0,48,657	0/0:20,0:20:60.20:0,60,839	0/0:28,0:28:84.25:0,84,1126	0/0:24,0:24:72.19:0,72,951	0/0:22,0:22:66.22:0,66,923	0/0:25,0:24:72.20:0,72,943	0/0:20,0:20:60.20:0,60,831	0/0:13,0:13:33.08:0,33,437	0/0:18,0:13:39.13:0,39,545	0/0:26,0:25:75.25:0,75,1049	0/0:25,0:25:66.18:0,66,872	0/0:25,0:25:69.13:0,69,860	0/0:22,0:22:66.20:0,66,890	0/0:36,0:35:99:0,99,1329	0/0:18,0:18:48.15:0,48,657	0/0:22,0:22:63.20:0,63,852	0/0:26,0:26:78.24:0,78,1051	0/0:6,0:6:18.04:0,18,234
chr10	2615426	.	AAACCAT	A	684.46	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.227;DP=625;FS=6.510;HRun=0;HaplotypeScore=117.0249;InbreedingCoeff=0.9760;MQ=58.07;MQ0=13;MQRankSum=-5.531;QD=45.63;ReadPosRankSum=-0.734;VQSLOD=3.2500;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,14:15:33.11:779,33,0	0/0:11,0:11:33.10:0,33,1095	0/0:19,0:11:33.09:0,33,986	0/0:17,0:7:18.04:0,18,357	0/0:33,0:33:90.31:0,90,3184	0/0:34,0:34:99:0,99,3437	0/0:16,0:16:48.16:0,48,1579	0/0:38,0:36:99:0,105,3548	0/0:24,0:24:72.25:0,72,2566	0/0:24,0:24:72.25:0,72,2568	0/0:30,0:30:81.28:0,81,2807	0/0:22,0:22:63.22:0,63,2200	0/0:21,0:21:57.20:0,57,1905	0/0:19,0:19:51.16:0,51,1705	0/0:26,0:26:78.25:0,78,2687	0/0:19,0:19:51.17:0,51,1738	0/0:23,0:22:57.18:0,57,1891	0/0:20,0:19:60.21:0,60,1898	0/0:24,0:17:51.16:0,51,1684	0/0:34,0:33:99:0,99,3316	0/0:14,0:14:39.13:0,39,1312	0/0:25,0:25:66.23:0,66,2238	0/0:33,0:33:96.32:0,96,3270	0/0:18,0:18:54.19:0,54,1874	0/0:20,0:20:60.18:0,60,1954	0/0:19,0:19:54.19:0,54,1887	0/0:22,0:22:60.21:0,60,2081	0/0:5,0:5:15.05:0,15,535
chr10	2618220	.	A	AT	412.57	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-4.560;DP=465;FS=3.423;HRun=7;HaplotypeScore=45.1617;InbreedingCoeff=0.9304;MQ=80.72;MQ0=0;MQRankSum=-1.476;QD=27.50;ReadPosRankSum=-0.253;VQSLOD=4.0346;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,15:15:42.13:507,42,0	0/0:10,0:10:30.03:0,30,284	0/0:15,0:15:15.24:0,15,255	0/0:9,0:9:14.71:0,15,168	0/0:24,0:24:60.09:0,60,579	0/0:23,0:23:54.06:0,54,515	0/0:16,0:16:39.02:0,39,364	0/0:26,0:26:53.76:0,54,521	0/0:11,0:11:24.03:0,24,232	0/0:24,0:24:66.10:0,66,637	0/0:18,0:18:51.06:0,51,486	0/0:12,0:12:30.04:0,30,290	0/0:10,0:10:30.05:0,30,290	0/0:18,0:18:45.07:0,45,435	0/0:17,0:17:45.05:0,45,428	0/0:12,0:12:27.04:0,27,260	0/0:20,0:20:48.07:0,48,463	0/0:17,0:17:48.08:0,48,463	0/0:15,0:15:30.05:0,30,290	0/0:34,0:34:99:0,99,956	0/0:9,0:9:27.04:0,27,261	0/0:25,0:25:66.10:0,66,637	0/0:20,0:20:54.08:0,54,522	0/0:10,0:10:27.03:0,27,254	0/0:10,0:10:21.03:0,21,203	0/0:21,0:21:60.10:0,60,579	0/0:19,0:19:51.06:0,51,486	0/0:5,0:5:11.97:0,12,102
chr10	2618406	.	C	CGTGTGT	809.35	PASS	AB=0.894;AC=14;AF=0.259;AN=54;BaseQRankSum=1.671;DP=664;FS=0.726;HRun=0;HaplotypeScore=140.3413;InbreedingCoeff=0.4555;MQ=63.67;MQ0=9;MQRankSum=-1.275;QD=3.28;ReadPosRankSum=-4.105;VQSLOD=0.6985;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:28,11:47:0:0,0,0	0/0:11,0:11:3:0,3,61	0/1:40,0:18:0:0,0,0	./.	0/0:26,0:26:6.01:0,6,90	0/0:21,0:23:12.03:0,12,206	0/1:17,0:17:8.64:9,0,192	1/1:26,0:26:14.97:180,15,0	0/0:13,0:16:15.94:0,16,287	0/0:23,0:23:11.81:0,12,159	0/0:23,0:24:3.20:0,3,444	0/0:17,0:21:21.06:0,21,337	0/0:22,0:22:21.06:0,21,390	0/0:20,0:22:21.54:0,22,388	0/0:16,0:18:15.05:0,15,285	0/1:11,0:13:3.48:3,0,229	0/1:15,0:34:78.94:238,0,79	0/0:24,0:24:21.66:0,22,522	0/0:19,0:19:6.01:0,6,88	0/1:23,0:21:1.92:2,0,286	0/0:30,0:31:15.04:0,15,285	0/0:19,0:21:15.54:0,16,337	0/0:17,0:17:11.46:0,11,173	0/0:35,0:37:42.14:0,42,768	0/0:19,0:19:9.03:0,9,170	1/1:13,0:24:32.34:377,32,0	1/1:9,0:16:3.95:41,4,0	1/1:7,0:7:11.93:108,12,0
chr10	2619349	.	C	CAT	1642.98	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-6.993;DP=688;FS=1.474;HRun=0;HaplotypeScore=81.9196;InbreedingCoeff=0.9994;MQ=90.34;MQ0=0;MQRankSum=-4.332;QD=44.40;ReadPosRankSum=3.610;VQSLOD=5.1307;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,34:37:90.31:1738,90,0	0/0:15,0:15:42.07:0,42,574	0/0:29,0:29:64.75:0,65,920	0/0:33,0:29:63.27:0,63,901	0/0:28,0:28:81.28:0,81,1240	0/0:25,0:25:72.24:0,72,1103	0/0:27,0:27:81.28:0,81,1239	0/0:21,0:21:60.15:0,60,873	0/0:26,0:26:78.26:0,78,1194	0/0:16,0:16:42.14:0,42,643	0/0:11,0:11:30.10:0,30,459	0/0:29,0:29:81.28:0,81,1239	0/0:23,0:23:69.21:0,69,1032	0/0:16,0:16:48.15:0,48,713	0/0:41,0:41:99:0,120,1785	0/0:23,0:23:66.22:0,66,1011	0/0:27,0:27:72.20:0,72,1076	0/0:17,0:17:48.16:0,48,728	0/0:31,0:31:90.31:0,90,1379	0/0:32,0:32:93.30:0,93,1402	0/0:37,0:37:99:0,108,1654	0/0:22,0:22:63.21:0,63,963	0/0:20,0:20:44.91:0,45,688	0/0:25,0:25:75.25:0,75,1149	0/0:21,0:21:57.19:0,57,873	0/0:18,0:18:54.18:0,54,827	0/0:21,0:21:60.20:0,60,918	0/0:17,0:17:51.17:0,51,781
chr10	2619484	.	T	TACAC	1812.52	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-3.042;DP=609;FS=8.260;HRun=0;HaplotypeScore=124.4329;InbreedingCoeff=0.8205;MQ=67.64;MQ0=7;MQRankSum=-1.395;QD=17.77;ReadPosRankSum=-1.721;VQSLOD=2.6334;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:26:14.55:172,15,0	0/0:11,0:11:21.07:0,21,335	0/0:38,0:20:3.01:0,3,46	0/0:26,0:18:3:0,3,44	0/0:22,0:24:36.09:0,36,511	0/0:19,0:20:36.10:0,36,531	0/0:16,0:19:29.81:0,30,395	0/0:35,0:35:35.42:0,35,496	0/0:19,0:19:36.12:0,36,570	0/0:28,0:28:36.11:0,36,534	0/0:20,0:23:11.46:0,11,278	0/0:13,0:13:8.67:0,9,140	0/0:19,0:19:36.10:0,36,548	0/0:14,0:16:24.06:0,24,343	0/0:9,0:24:29.86:0,30,249	0/0:19,0:19:36.12:0,36,570	1/1:17,0:17:3.47:34,3,0	0/0:6,0:9:14.89:0,15,174	0/0:22,0:24:30.05:0,30,392	0/0:24,0:24:36.11:0,36,547	0/0:24,0:24:33.49:0,33,453	0/0:13,0:13:21.07:0,21,332	0/0:16,0:16:21.06:0,21,315	0/0:23,0:26:48.12:0,48,679	0/0:33,0:34:41.61:0,42,757	1/1:10,7:19:5.15:603,5,0	1/1:9,13:25:32.78:729,33,0	1/1:3,8:12:18.06:431,18,0
chr10	2621334	.	CATCTG	C	1309.45	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.460;DP=670;FS=7.331;HRun=0;HaplotypeScore=124.4813;InbreedingCoeff=0.9974;MQ=87.87;MQ0=0;MQRankSum=-5.020;QD=43.65;ReadPosRankSum=2.204;VQSLOD=3.6980;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,117,3506	0/0:10,0:10:30.10:0,30,968	0/0:31,0:31:92.51:0,93,2732	0/0:23,0:23:60.18:0,60,1687	0/0:23,0:23:69.24:0,69,2209	0/0:28,0:28:84.29:0,84,2714	0/0:24,0:24:72.25:0,72,2200	0/0:29,0:29:84.27:0,84,2551	0/0:18,0:18:51.18:0,51,1622	0/0:31,0:31:93.32:0,93,2975	0/0:16,0:16:45.14:0,45,1382	0/0:26,0:26:78.27:0,78,2463	0/0:26,0:26:78.27:0,78,2505	0/0:24,0:24:66.21:0,66,2045	0/0:30,0:29:87.30:0,87,2804	0/0:23,0:23:69.24:0,69,2229	1/1:1,29:30:63.22:1404,63,0	0/0:31,0:31:90.31:0,90,2870	0/0:13,0:13:39.13:0,39,1178	0/0:19,0:19:57.20:0,57,1831	0/0:42,0:42:99:0,126,4004	0/0:17,0:17:51.18:0,51,1613	0/0:16,0:16:48.16:0,48,1532	0/0:26,0:26:78.27:0,78,2391	0/0:25,0:25:72.25:0,72,2314	0/0:19,0:19:57.20:0,57,1825	0/0:20,0:20:57.20:0,57,1821	0/0:9,0:9:24.08:0,24,669
chr10	2622125	.	C	CCT	1570.79	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-1.709;DP=409;FS=1.255;HRun=0;HaplotypeScore=67.2148;InbreedingCoeff=0.7762;MQ=63.13;MQ0=38;MQRankSum=0.029;QD=20.40;ReadPosRankSum=1.371;VQSLOD=3.8660;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,19:24:36.12:605,36,0	0/0:6,0:5:6.02:0,6,78	0/0:37,0:16:14.83:0,15,251	0/0:44,0:21:5.90:0,6,326	0/0:6,0:6:9.03:0,9,117	0/0:19,0:18:44.88:0,45,559	0/0:18,0:15:36.08:0,36,439	0/0:15,0:13:12.02:0,12,141	0/0:8,0:7:21.05:0,21,247	0/0:12,0:11:23.69:0,24,289	0/0:11,0:11:30.05:0,30,337	0/0:5,0:4:3:0,3,27	0/0:11,0:9:17.99:0,18,188	0/0:7,0:5:12.03:0,12,139	0/0:6,0:4:5.97:0,6,46	0/0:17,0:15:17.50:0,17,295	1/1:13,0:19:43.55:258,44,0	0/0:12,0:12:23.21:0,23,292	0/0:17,0:14:35.99:0,36,404	0/0:6,0:6:7.25:0,7,67	0/0:25,0:20:44.39:0,44,490	0/0:13,0:13:30.06:0,30,363	0/0:13,0:12:20.96:0,21,270	0/0:17,0:15:42.10:0,42,507	0/0:5,0:4:2.22:0,2,7	1/1:3,16:19:42.10:621,42,0	1/1:0,3:3:6.02:101,6,0	1/1:1,6:7:9.03:148,9,0
chr10	2623741	.	TA	T	1640.22	PASS	AB=0.593;AC=11;AF=0.204;AN=54;BaseQRankSum=8.764;DP=273;FS=1.167;HRun=7;HaplotypeScore=31.1961;InbreedingCoeff=0.8472;MQ=73.68;MQ0=1;MQRankSum=-2.216;QD=23.43;ReadPosRankSum=1.129;VQSLOD=3.0366;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,10:14:36.08:365,36,0	0/0:5,0:5:15.04:0,15,176	0/0:11,0:8:11.87:0,12,110	0/0:17,0:8:17.85:0,18,181	0/0:17,0:17:42.13:0,42,528	0/0:12,0:12:36.10:0,36,440	0/0:3,0:3:9.03:0,9,113	0/0:24,0:23:63.17:0,63,759	0/0:6,0:6:12.04:0,12,151	0/0:11,0:11:33.11:0,33,415	0/0:11,0:11:33.11:0,33,415	0/0:4,0:4:12.04:0,12,151	0/0:5,0:5:12.04:0,12,150	0/0:3,0:3:9.03:0,9,113	1/1:2,4:6:15.03:153,15,0	0/0:4,0:4:12.04:0,12,151	0/0:18,0:18:42.13:0,42,527	0/0:16,0:16:48.15:0,48,598	0/0:19,0:19:45.13:0,45,553	0/0:5,0:5:15.05:0,15,188	0/0:5,0:5:15.05:0,15,189	./.	0/0:3,0:3:9.03:0,9,112	0/0:4,0:4:12.04:0,12,151	1/1:1,12:13:39.09:397,39,0	0/1:5,11:16:1.68:293,0,2	1/1:2,12:14:42.08:422,42,0	1/1:0,7:7:18.04:184,18,0
chr10	2623805	.	GA	G	1318.61	PASS	AC=14;AF=0.259;AN=54;BaseQRankSum=10.379;DP=263;FS=0.000;HRun=8;HaplotypeScore=30.5248;InbreedingCoeff=0.9183;MQ=61.58;MQ0=0;MQRankSum=-1.390;QD=18.31;ReadPosRankSum=1.549;VQSLOD=2.5824;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,13:14:36.05:348,36,0	0/0:7,0:7:15.05:0,15,181	0/0:4,0:4:11.82:0,12,118	./.	0/0:13,0:13:33.09:0,33,389	0/0:18,0:18:51.16:0,51,616	0/0:6,0:6:18.06:0,18,217	0/0:16,0:16:27.08:0,27,326	0/0:5,0:5:15.05:0,15,181	0/0:6,0:6:15.05:0,15,181	0/0:16,0:16:42.11:0,42,488	0/0:4,0:4:6.02:0,6,73	0/0:5,0:5:15.05:0,15,181	0/0:3,0:3:6.02:0,6,72	1/1:0,0:6:10.19:30,10,0	0/0:7,0:7:21.06:0,21,254	1/1:2,15:17:45.07:435,45,0	0/0:18,0:18:48.15:0,48,580	0/0:24,0:24:57.12:0,57,653	0/0:9,0:9:27.08:0,27,326	0/0:12,0:12:36.11:0,36,435	0/0:3,0:3:9.03:0,9,109	0/0:7,0:7:21.06:0,21,244	0/0:8,0:8:24.07:0,24,290	1/1:1,0:12:20.37:60,20,0	1/1:1,7:8:21.03:203,21,0	1/1:0,10:10:30.05:290,30,0	1/1:0,5:5:15.02:145,15,0
chr10	2624048	.	CT	C	591.61	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.112;DP=616;FS=6.281;HRun=9;HaplotypeScore=60.2825;InbreedingCoeff=0.9774;MQ=71.56;MQ0=0;MQRankSum=-3.516;QD=20.40;ReadPosRankSum=1.150;VQSLOD=4.3808;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,27:29:75.04:686,75,0	0/0:6,0:6:15.04:0,15,165	0/0:17,0:17:21.43:0,21,293	0/0:14,0:14:29.59:0,30,301	0/0:27,0:26:75.22:0,75,866	0/0:23,0:23:66.16:0,66,741	0/0:21,0:21:60.18:0,60,689	0/0:33,0:33:78.22:0,78,892	0/0:22,0:22:60.18:0,60,692	0/0:27,0:27:63.19:0,63,727	0/0:12,0:12:33.10:0,33,380	0/0:36,0:36:87.24:0,87,994	0/0:32,0:32:84.24:0,84,959	0/0:29,0:29:84.08:0,84,949	0/0:31,0:31:81.23:0,81,926	0/0:22,0:22:66.19:0,66,753	0/0:25,0:25:69.16:0,69,781	0/0:19,0:19:51.13:0,51,570	0/0:18,1:20:26.51:0,27,530	0/0:10,0:10:30.09:0,30,346	0/0:21,0:21:60.18:0,60,692	0/0:13,0:13:39.12:0,39,450	0/0:19,0:19:48.14:0,48,546	0/0:17,0:17:48.14:0,48,554	0/0:18,0:18:54.15:0,54,615	0/0:33,1:34:59.79:0,60,942	0/0:30,0:30:75.22:0,75,866	0/0:9,0:9:27.08:0,27,311
chr10	2624665	.	T	TA	4865.67	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-14.224;DP=626;FS=6.403;HRun=6;HaplotypeScore=58.6667;InbreedingCoeff=0.9556;MQ=87.91;MQ0=0;MQRankSum=-1.934;QD=31.39;ReadPosRankSum=1.152;VQSLOD=5.4508;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,105,1063	0/0:15,0:15:42.09:0,42,428	0/0:27,0:27:72.15:0,72,725	0/0:18,0:18:0.52:0,1,226	0/0:37,0:37:99:0,105,1058	0/0:24,0:24:69.12:0,69,690	0/0:19,0:19:54.12:0,54,551	1/1:3,19:22:57.16:701,57,0	0/0:18,0:18:42.05:0,42,414	0/0:25,0:25:66.15:0,66,673	0/0:23,0:23:60.01:0,60,612	0/0:18,0:18:54.12:0,54,551	0/0:18,0:18:48.11:0,48,488	0/0:19,0:19:48.11:0,48,490	1/1:2,20:22:54.17:680,54,0	0/0:17,0:17:42.09:0,42,428	1/1:1,30:31:81.26:1018,81,0	0/0:16,0:16:39.08:0,39,397	0/0:30,0:30:82:0,82,805	0/0:29,0:29:87.20:0,87,888	0/0:18,0:18:48.11:0,48,490	0/0:23,0:23:66.14:0,66,667	0/0:23,0:23:63.13:0,63,636	0/0:18,0:18:42.09:0,42,429	1/1:3,13:16:33.11:415,33,0	1/1:6,18:24:23.56:610,24,0	1/1:1,29:30:86.64:1065,87,0	1/1:0,10:10:30.10:377,30,0
chr10	2625341	.	TA	T	2194.45	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=10.575;DP=513;FS=1.882;HRun=10;HaplotypeScore=50.4271;InbreedingCoeff=0.8899;MQ=75.64;MQ0=1;MQRankSum=0.634;QD=16.75;ReadPosRankSum=1.664;VQSLOD=3.9827;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,13:15:38.99:338,39,0	0/0:6,0:6:15.04:0,15,166	0/0:19,0:12:11.51:0,12,100	0/0:12,0:12:17.46:0,17,176	0/0:26,0:26:72.19:0,72,796	0/0:18,1:21:24.90:0,25,478	0/0:6,0:6:18.05:0,18,199	0/0:35,0:35:78.21:0,78,863	0/0:14,0:14:30.08:0,30,332	0/0:29,0:29:81.21:0,81,884	0/0:25,1:26:49.14:0,49,762	0/0:15,0:15:39.10:0,39,424	0/0:11,1:12:10.01:0,10,325	0/1:9,0:9:7.87:8,0,148	1/1:3,16:19:42.88:367,43,0	0/0:19,0:19:57.15:0,57,623	0/0:19,0:19:54.15:0,54,597	0/0:8,0:8:21.04:0,21,223	0/0:23,1:24:40.03:0,40,650	0/0:19,1:20:26.35:0,26,557	0/0:18,0:18:51.14:0,51,564	0/0:18,0:18:51.11:0,51,546	0/0:21,1:22:28.08:0,28,530	0/0:13,0:13:33.09:0,33,365	1/1:0,19:20:50.03:423,50,0	1/1:7,21:28:62.96:544,63,0	1/1:4,22:26:59.98:521,60,0	1/1:2,12:14:20.99:182,21,0
chr10	2627095	.	C	CCT	10100.41	PASS	AB=0.556;AC=15;AF=0.268;AN=56;BaseQRankSum=-9.950;DP=628;FS=0.676;HRun=0;HaplotypeScore=76.5954;InbreedingCoeff=0.9092;MQ=64.69;MQ0=0;MQRankSum=-2.813;QD=52.88;ReadPosRankSum=0.806;VQSLOD=5.1829;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,16:19:48.16:943,48,0	0/0:13,0:13:39.07:0,39,581	0/0:25,0:25:75.12:0,75,1177	0/0:22,0:22:57.11:0,57,881	0/0:18,0:18:54.18:0,54,879	0/0:16,0:16:48.16:0,48,777	0/0:22,0:22:63.16:0,63,979	1/1:1,23:24:69.21:1328,69,0	0/0:16,0:16:48.16:0,48,777	0/0:38,0:38:99:0,111,1808	0/0:25,0:25:72.25:0,72,1173	0/0:24,0:24:69.19:0,69,1095	0/0:20,0:20:60.20:0,60,965	0/0:20,0:20:60.20:0,60,977	1/1:3,24:28:75.24:1487,75,0	0/0:23,0:23:69.24:0,69,1112	1/1:0,28:28:78.27:1581,78,0	0/0:13,0:13:39.13:0,39,615	0/0:18,0:18:48.14:0,48,737	0/0:34,0:34:99:0,99,1611	0/0:24,0:24:72.25:0,72,1167	0/0:24,0:24:72.20:0,72,1137	0/0:28,0:28:84.23:0,84,1313	0/0:14,0:14:33.11:0,33,537	1/1:2,17:19:54.19:1095,54,0	0/1:5,20:25:22.51:1235,0,23	1/1:2,33:36:96.33:1938,96,0	1/1:1,9:10:26.30:494,26,0
chr10	2627159	.	GT	G	3602.43	PASS	AB=0.719;AC=15;AF=0.268;AN=56;BaseQRankSum=13.226;DP=554;FS=0.772;HRun=9;HaplotypeScore=83.7851;InbreedingCoeff=0.8926;MQ=64.18;MQ0=7;MQRankSum=-9.995;QD=21.19;ReadPosRankSum=-0.931;VQSLOD=3.7988;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,9:12:27.01:246,27,0	0/0:10,0:10:24.05:0,24,264	0/0:29,1:17:7.53:0,8,203	0/0:37,2:16:9.88:0,10,151	0/0:19,0:19:54.15:0,54,614	0/0:14,0:13:33.09:0,33,371	0/0:12,0:12:30.09:0,30,343	1/1:9,20:29:63:576,63,0	0/0:13,0:13:36.11:0,36,415	0/0:27,0:27:69.07:0,69,785	0/0:27,1:28:47.74:0,48,793	0/0:16,0:16:39.10:0,39,440	0/0:21,0:21:57.10:0,57,631	0/0:19,0:19:48.14:0,48,554	1/1:2,13:15:39.02:355,39,0	0/0:10,0:10:30.09:0,30,346	0/1:14,9:22:9.96:278,0,10	0/0:14,0:14:42.09:0,42,470	0/0:23,1:22:35.72:0,36,664	0/0:30,0:30:78.08:0,78,861	0/0:10,0:10:20.42:0,20,215	0/0:17,0:17:42.03:0,42,449	0/0:17,1:18:20.61:0,21,474	0/0:12,0:12:33.09:0,33,371	1/1:3,18:21:60:541,60,0	1/1:3,23:27:28.75:598,29,0	1/1:4,31:35:93.03:844,93,0	1/1:2,6:8:18.01:165,18,0
chr10	2627168	.	TG	T	622.57	PASS	AB=0.962;AC=12;AF=0.214;AN=56;BaseQRankSum=14.547;DP=554;FS=2.265;HRun=1;HaplotypeScore=88.0304;InbreedingCoeff=0.4740;MQ=59.70;MQ0=7;MQRankSum=-11.238;QD=3.77;ReadPosRankSum=2.241;VQSLOD=0.5501;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:13,1:14:31.17:31,0,34	0/0:9,0:9:24.06:0,24,297	0/0:26,0:12:3.10:0,3,158	0/0:40,0:17:27.07:0,27,245	0/0:19,0:19:57.15:0,57,713	0/0:14,0:13:18.15:0,18,425	0/0:13,0:13:38.94:0,39,399	1/1:25,1:25:1.88:79,2,0	0/0:19,0:19:54:0,54,597	0/0:26,0:26:73.37:0,73,827	0/0:25,0:25:70.63:0,71,923	0/0:18,0:18:51.04:0,51,574	0/0:20,0:20:59.77:0,60,733	0/0:19,0:19:57.09:0,57,701	1/1:14,0:14:9.45:89,9,0	0/0:13,0:13:35.12:0,35,412	0/1:18,1:19:19.42:83,0,19	0/0:16,0:16:45.10:0,45,571	0/0:27,0:26:75.49:0,75,877	0/0:29,0:29:84.10:0,84,1016	0/0:9,0:9:23.56:0,24,250	0/0:16,0:16:42.09:0,42,525	0/0:18,0:18:36.94:0,37,514	0/0:13,0:13:36.04:0,36,424	1/1:20,0:20:22.61:163,23,0	0/1:26,1:27:25.54:131,0,26	0/1:39,0:39:33.75:167,0,34	1/1:6,0:6:11.87:40,12,0
chr10	2627178	.	G	GT	2722.26	PASS	AB=0.954;AC=19;AF=0.339;AN=56;BaseQRankSum=9.475;DP=550;FS=3.087;HRun=11;HaplotypeScore=78.6022;InbreedingCoeff=0.7517;MQ=59.10;MQ0=6;MQRankSum=-7.490;QD=12.90;ReadPosRankSum=-1.357;VQSLOD=3.5257;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:16:26.15:150,26,0	0/0:9,0:9:23.90:0,24,184	0/0:26,0:15:4.69:0,5,100	0/0:34,0:13:10.16:0,10,62	0/0:19,0:20:52.83:0,53,398	0/1:14,1:14:3.57:4,0,159	0/1:11,1:12:9.46:9,0,118	1/1:15,0:25:28.48:144,28,0	0/0:20,0:20:47.77:0,48,368	0/0:20,1:21:8.35:0,8,246	0/0:25,0:25:56.70:0,57,441	0/0:16,0:16:32.82:0,33,253	0/0:19,0:19:35.78:0,36,277	0/0:17,0:18:31.83:0,32,236	1/1:8,7:15:39.04:369,39,0	0/0:14,0:14:41.84:0,42,325	1/1:10,0:16:26.05:156,26,0	0/0:16,0:16:32.83:0,33,255	0/0:22,1:23:11.36:0,11,271	0/0:30,3:33:12.12:0,12,569	0/1:8,0:8:8.12:8,0,78	0/0:18,0:18:44.75:0,45,339	0/0:14,0:14:32.85:0,33,255	0/0:12,0:12:17.88:0,18,139	1/1:8,14:22:48.04:466,48,0	1/1:12,16:29:22.60:567,23,0	1/1:12,27:40:92.97:899,93,0	1/1:5,5:10:15.03:152,15,0
chr10	2630109	.	TACACACACACACACACACACAC	T	2408.07	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.034;DP=504;FS=5.814;HRun=0;HaplotypeScore=247.2272;InbreedingCoeff=0.8985;MQ=66.73;MQ0=7;MQRankSum=-5.887;QD=54.73;ReadPosRankSum=1.297;VQSLOD=1.9034;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:34:42.61:0,43,1292	0/0:8,0:10:18.06:0,18,1657	0/0:26,0:16:12.04:0,12,451	0/0:27,0:21:18.02:0,18,584	0/0:16,0:16:33.09:0,33,2260	0/0:13,0:13:21.07:0,21,1340	0/0:14,0:17:18.06:0,18,1651	0/0:26,0:25:36.12:0,36,2029	0/0:16,0:16:33.58:0,34,2415	0/0:15,0:15:36.12:0,36,2131	0/0:13,0:13:17.42:0,17,1217	0/0:17,0:16:36.12:0,36,3227	0/0:15,0:15:27.09:0,27,1660	0/0:12,0:11:24.08:0,24,1819	1/1:12,13:25:15.05:820,15,0	0/0:10,0:11:18.06:0,18,1488	0/0:17,0:32:36.11:0,36,2125	0/0:6,0:7:15.05:0,15,1362	0/0:20,0:22:42.12:0,42,2428	0/0:16,0:16:27.55:0,28,1719	0/0:25,0:24:51.18:0,51,3596	0/0:12,0:17:24.08:0,24,1215	0/0:11,0:11:12.04:0,12,1014	0/0:17,0:21:30.10:0,30,1968	1/1:7,9:19:33.58:1706,34,0	0/0:19,0:19:42.14:0,42,3519	0/0:9,0:11:18.06:0,18,1681	0/0:9,0:7:9.03:0,9,793
chr10	2630721	.	A	ATTT	1525	PASS	AB=0.762;AC=10;AF=0.179;AN=56;BaseQRankSum=3.775;DP=537;FS=19.983;HRun=13;HaplotypeScore=91.5010;InbreedingCoeff=0.6252;MQ=69.91;MQ0=0;MQRankSum=-0.019;QD=12.30;ReadPosRankSum=-2.009;VQSLOD=-0.4512;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:29:62.65:0,63,648	0/0:11,0:11:23.87:0,24,247	0/1:5,0:4:5.19:5,0,20	0/0:13,0:13:18.17:0,18,140	0/0:19,0:21:50.82:0,51,516	0/0:22,0:25:49.30:0,49,523	0/0:12,0:14:19.31:0,19,208	0/0:5,0:23:50.35:0,50,298	0/0:18,0:18:32.74:0,33,345	0/0:25,0:28:53.72:0,54,534	0/0:24,0:25:54.55:0,55,586	0/0:11,0:13:7.42:0,7,224	0/0:25,0:25:46.18:0,46,506	0/1:6,0:8:1.61:2,0,144	0/1:1,0:25:2.34:63,0,2	0/0:15,0:15:29.80:0,30,314	0/0:4,0:22:45.79:0,46,280	0/0:4,0:4:5.94:0,6,65	0/0:7,0:10:23.78:0,24,208	0/0:29,0:33:52.28:0,52,567	0/0:17,0:17:41.81:0,42,425	0/0:19,0:23:46.08:0,46,502	0/0:23,0:24:10.34:0,10,461	0/0:15,0:16:35.96:0,36,405	0/1:3,0:22:3.85:143,0,4	1/1:7,14:26:21.73:674,22,0	1/1:8,15:27:40.59:533,41,0	1/1:2,6:11:18.02:260,18,0
chr10	2631606	.	A	AAATAGT	4176.85	PASS	AB=0.613;AC=5;AF=0.089;AN=56;BaseQRankSum=-1.434;DP=633;FS=16.744;HRun=0;HaplotypeScore=126.8918;InbreedingCoeff=0.7364;MQ=71.01;MQ0=0;MQRankSum=-7.485;QD=58.01;ReadPosRankSum=-3.958;VQSLOD=1.5045;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:7,0:19:32:391,0,32	0/0:13,0:13:36.12:0,36,848	0/0:13,0:13:27.50:0,28,519	0/0:7,0:7:5.45:0,5,133	0/0:35,0:35:99:0,102,2243	0/0:19,0:18:57.17:0,57,1213	0/0:11,0:11:30.07:0,30,613	1/1:7,24:38:99:3167,108,0	0/0:27,0:27:78.25:0,78,1792	0/0:39,0:39:99:0,114,2625	0/0:21,0:21:57.12:0,57,1113	0/0:19,0:19:57.18:0,57,1278	0/0:27,0:27:78.25:0,78,1792	0/0:20,0:20:60.19:0,60,1349	0/0:26,0:26:78.25:0,78,1736	0/0:31,0:31:93.31:0,93,2124	1/1:1,9:15:18.06:619,18,0	0/0:18,0:18:54.12:0,54,1174	0/0:16,0:16:47.83:0,48,1031	0/0:31,0:31:90.27:0,90,1976	0/0:26,0:26:78.25:0,78,1770	0/0:24,0:24:69.18:0,69,1501	0/0:24,0:24:66.20:0,66,1424	0/0:13,0:13:39.10:0,39,799	0/0:27,0:27:78.21:0,78,1672	0/0:25,0:25:72.23:0,72,1566	0/0:42,0:42:99:0,123,2878	0/0:7,0:7:21.07:0,21,495
chr10	2632792	.	AG	A	5597.28	PASS	AB=0.847;AC=26;AF=0.464;AN=56;BaseQRankSum=20.758;DP=990;FS=6.510;HRun=4;HaplotypeScore=285.3592;InbreedingCoeff=-0.8738;MQ=48.53;MQ0=25;MQRankSum=-16.560;QD=6.33;ReadPosRankSum=-1.579;VQSLOD=0.2020;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:36,7:43:99:225,0,805	0/1:14,1:14:47.10:47,0,340	0/0:63,8:23:27.36:0,27,478	0/1:53,12:28:73.70:74,0,387	0/1:31,9:37:99:467,0,489	0/1:29,6:35:99:191,0,695	0/1:21,6:22:89.19:89,0,492	0/1:50,11:58:99:321,0,1107	0/1:21,5:25:99:192,0,441	0/1:26,6:31:99:179,0,598	0/1:19,6:25:99:234,0,479	0/1:28,12:40:99:417,0,625	0/1:20,9:28:99:346,0,370	0/1:30,7:35:99:247,0,570	0/1:25,10:35:99:390,0,427	0/1:27,13:39:99:404,0,649	0/1:23,1:24:60.54:61,0,607	0/1:20,1:19:83.35:83,0,443	0/1:40,5:36:99:123,0,739	0/1:26,8:34:99:356,0,568	0/0:34,1:34:8.08:0,8,837	0/1:29,8:36:99:371,0,740	0/1:22,4:27:99:138,0,534	0/1:29,4:33:51.20:51,0,785	0/1:23,7:28:99:212,0,526	0/1:26,4:29:62.59:63,0,701	0/1:29,8:37:99:300,0,638	0/1:10,1:13:16.28:16,0,249
chr10	2632805	.	TA	T	11716.48	PASS	AB=0.711;AC=28;AF=0.500;AN=56;BaseQRankSum=18.660;DP=945;FS=27.941;HRun=2;HaplotypeScore=296.6523;InbreedingCoeff=-0.9925;MQ=46.96;MQ0=18;MQRankSum=-12.603;QD=12.40;ReadPosRankSum=2.906;VQSLOD=1.4770;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:18,20:38:99:553,0,566	0/1:10,5:14:99:115,0,361	0/1:65,2:23:48.16:48,0,324	0/1:55,7:20:19.75:20,0,186	0/1:15,18:31:99:603,0,400	0/1:20,18:38:99:544,0,606	0/1:14,9:18:99:182,0,338	0/1:38,25:56:99:650,0,728	0/1:13,15:27:99:494,0,329	0/1:19,13:30:99:448,0,478	0/1:13,11:24:99:337,0,448	0/1:16,29:45:99:984,0,508	0/1:11,19:29:99:640,0,292	0/1:18,17:33:99:601,0,488	0/1:10,26:36:99:890,0,253	0/1:16,23:39:99:772,0,575	0/1:15,6:21:99:161,0,369	0/1:13,7:18:99:225,0,325	0/1:25,7:27:99:184,0,487	0/1:14,16:29:99:501,0,410	0/1:19,5:24:9.77:10,0,465	0/1:16,19:35:99:572,0,605	0/1:17,10:27:99:360,0,381	0/1:24,9:33:99:179,0,635	0/1:18,13:29:99:416,0,448	0/1:17,14:30:99:450,0,517	0/1:18,18:36:99:591,0,654	0/1:8,6:14:99:188,0,226
chr10	2634330	.	CGT	C	1225.59	PASS	AB=0.862;AC=25;AF=0.463;AN=54;BaseQRankSum=9.305;DP=687;FS=2.831;HRun=0;HaplotypeScore=107.1171;InbreedingCoeff=-0.1942;MQ=55.90;MQ0=14;MQRankSum=-2.513;QD=2.39;ReadPosRankSum=2.285;VQSLOD=2.2421;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:37:23.34:153,23,0	0/0:9,0:11:15.03:0,15,187	0/0:25,0:9:0.47:0,0,1	./.	0/1:9,1:13:43.23:43,0,162	0/1:17,1:18:52.24:52,0,221	1/1:16,21:39:47.46:473,47,0	0/0:36,0:42:6.78:0,7,61	0/1:19,1:20:29:29,0,325	0/1:12,0:13:2.48:2,0,95	0/1:10,2:12:45.21:45,0,188	0/0:30,1:31:18.21:0,18,636	0/1:21,2:23:3.07:3,0,364	0/1:23,2:25:18.11:18,0,565	0/1:13,4:17:99:103,0,158	0/0:21,1:22:11.97:0,12,571	1/1:13,0:31:33.22:166,33,0	0/1:35,2:38:5.84:6,0,858	0/1:15,1:14:15.17:15,0,141	0/0:14,1:15:21:0,21,290	0/1:53,2:56:49.81:50,0,706	0/1:20,7:27:48.70:49,0,582	0/1:14,5:19:51.55:52,0,242	0/1:53,4:58:29.90:30,0,1174	0/1:16,0:17:6.40:6,0,237	0/1:5,0:14:1.45:41,0,1	0/1:4,0:8:8.33:8,0,18	1/1:3,0:8:8.52:42,9,0
chr10	2634466	.	C	CTAATTAAT	8630.24	PASS	AB=0.595;AC=15;AF=0.268;AN=56;BaseQRankSum=-0.734;DP=538;FS=22.511;HRun=0;HaplotypeScore=134.1575;InbreedingCoeff=0.9040;MQ=71.36;MQ0=0;MQRankSum=-10.570;QD=49.60;ReadPosRankSum=-2.248;VQSLOD=2.8621;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,25:34:69.24:2655,69,0	0/0:11,0:11:24.08:0,24,614	0/0:11,0:11:8.62:0,9,111	0/0:11,0:11:17.50:0,18,322	0/0:19,0:19:48.16:0,48,1219	0/0:26,0:26:66.19:0,66,1566	0/0:22,0:22:48.14:0,48,1078	1/1:16,0:35:65.98:695,66,0	0/0:20,0:20:51.18:0,51,1333	0/0:32,0:32:87.29:0,87,2115	0/0:16,0:16:42.13:0,42,987	0/0:28,0:28:63.21:0,63,1496	0/0:23,0:23:60.20:0,60,1516	0/0:15,0:15:42.14:0,42,1038	1/1:4,10:15:18.06:762,18,0	0/0:14,0:14:36.11:0,36,868	1/1:5,0:15:24:221,24,0	0/0:20,0:20:48.13:0,48,1147	0/0:13,0:13:33.11:0,33,839	0/0:11,0:11:21.07:0,21,521	0/0:14,0:14:30.10:0,30,726	0/0:17,0:17:33.11:0,33,782	0/0:17,0:17:42.14:0,42,1092	0/0:24,0:24:59.82:0,60,1480	1/1:13,12:25:39.13:1595,39,0	0/1:8,16:25:6.54:1623,0,7	1/1:6,5:13:18.05:570,18,0	1/1:4,6:12:12.04:509,12,0
chr10	2634778	.	GTC	G	931.78	PASS	AB=0.879;AC=20;AF=0.370;AN=54;BaseQRankSum=5.492;DP=553;FS=10.793;HRun=0;HaplotypeScore=80.6184;InbreedingCoeff=-0.4452;MQ=69.88;MQ0=10;MQRankSum=3.084;QD=2.67;ReadPosRankSum=-0.759;VQSLOD=0.9773;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:29:20.77:126,21,0	0/1:6,1:8:28.95:29,0,138	./.	0/0:32,0:25:0.47:0,0,2	0/1:20,7:28:99:147,0,351	0/1:15,0:17:33.94:34,0,221	0/1:13,4:17:97.26:97,0,197	0/0:30,0:29:9.02:0,9,92	0/1:11,3:14:47.64:48,0,152	0/1:15,2:17:43.75:44,0,191	0/1:16,2:18:35.36:35,0,322	0/0:16,0:16:24.05:0,24,303	0/1:16,1:18:78.38:78,0,271	0/1:13,1:14:11.76:12,0,232	0/0:24,0:24:6.25:0,6,443	0/1:15,3:18:11.79:12,0,223	0/0:14,0:31:39.02:0,39,425	0/1:18,0:20:30.92:31,0,252	0/1:19,0:18:47.31:47,0,161	0/1:15,4:19:99:106,0,149	0/1:18,1:17:31.69:32,0,313	0/1:8,1:10:11.74:12,0,228	0/1:12,3:16:17.84:18,0,262	0/1:24,4:27:99:155,0,307	0/1:14,0:13:26.83:27,0,39	0/0:17,0:15:31.30:0,31,329	0/0:15,0:20:17.97:0,18,164	0/0:8,0:9:9.02:0,9,104
chr10	2634831	.	G	GGT	165.46	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=1.293;DP=673;FS=6.550;HRun=0;HaplotypeScore=97.1291;InbreedingCoeff=0.8332;MQ=64.37;MQ0=16;MQRankSum=0.154;QD=4.04;ReadPosRankSum=-1.817;VQSLOD=1.5140;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:9,31:40:15.02:254,15,0	0/0:16,0:16:37.36:0,37,463	0/0:47,0:15:20.46:0,20,385	0/0:62,0:27:56.51:0,57,634	0/0:26,0:26:65.29:0,65,716	0/0:26,0:26:59:0,59,731	0/0:22,0:22:42.04:0,42,517	0/0:25,0:24:58.39:0,58,727	0/0:18,0:18:51.16:0,51,652	0/0:22,0:22:32.39:0,32,673	0/0:17,0:17:16.37:0,16,394	0/0:17,0:17:42.14:0,42,538	0/0:24,0:23:60.18:0,60,746	0/0:16,0:16:39.11:0,39,477	0/0:29,0:29:66.13:0,66,810	0/0:17,0:17:48.15:0,48,611	0/0:28,0:26:60.19:0,60,764	0/0:23,0:24:43.05:0,43,709	0/0:14,0:15:3.74:0,4,275	0/0:13,0:13:36.07:0,36,422	0/0:29,0:28:75.89:0,76,864	0/0:22,0:22:55.23:0,55,636	0/0:25,0:25:64.56:0,65,729	0/0:31,0:31:84.26:0,84,1063	0/0:13,0:12:20.58:0,21,231	0/0:16,0:16:45.15:0,45,576	0/0:18,0:18:42.05:0,42,491	0/0:14,0:14:36.11:0,36,455
chr10	2637185	.	C	CT	1879.40	PASS	AB=0.889;AC=9;AF=0.161;AN=56;BaseQRankSum=-8.751;DP=579;FS=3.449;HRun=10;HaplotypeScore=59.7888;InbreedingCoeff=0.8909;MQ=84.74;MQ0=0;MQRankSum=-3.213;QD=15.66;ReadPosRankSum=0.144;VQSLOD=4.0072;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:35.30:0,35,422	0/0:7,0:7:20.96:0,21,170	0/0:24,0:21:24.10:0,24,257	0/0:22,0:22:28.74:0,29,249	0/0:20,0:20:48.02:0,48,414	0/0:20,0:20:50.84:0,51,406	0/0:18,0:18:50.89:0,51,412	1/1:7,24:31:41.39:616,41,0	0/0:26,0:28:73.92:0,74,591	0/0:24,0:24:62.89:0,63,513	0/0:18,0:18:35.91:0,36,295	0/0:18,0:18:44.86:0,45,362	0/0:13,0:13:25.33:0,25,261	0/0:14,0:14:29.93:0,30,246	1/1:4,16:21:31.28:417,31,0	0/0:26,0:28:73.90:0,74,591	1/1:5,26:31:25.93:687,26,0	0/0:23,1:24:24.36:0,24,386	0/1:14,2:16:5.07:5,0,170	0/0:24,0:24:47.20:0,47,372	0/0:9,0:9:17.95:0,18,144	0/0:15,0:15:35.92:0,36,295	0/0:19,0:19:35.76:0,36,283	0/0:15,0:16:37.99:0,38,301	1/1:1,18:21:30.07:317,30,0	0/0:19,0:19:32.82:0,33,259	0/0:39,0:40:87.15:0,87,820	0/0:12,0:12:23.95:0,24,197
chr10	2638070	.	AAAGGAGCATGGTAGTCCTACCTGTCCT	A	7231.37	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=10.510;DP=659;FS=8.460;HRun=0;HaplotypeScore=405.0089;InbreedingCoeff=0.9757;MQ=69.53;MQ0=0;MQRankSum=-9.010;QD=60.26;ReadPosRankSum=3.691;VQSLOD=2.0161;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,24:28:18.02:1034,18,0	0/0:8,0:8:18.06:0,18,1240	0/0:7,0:7:15.94:0,16,409	0/0:10,0:10:11.53:0,12,387	0/0:23,0:23:66.23:0,66,6575	0/0:30,0:30:75.24:0,75,6928	0/0:41,0:41:99:0,108,9420	0/0:25,0:25:66.23:0,66,4252	0/0:19,0:19:51.18:0,51,5121	0/0:17,0:17:42.14:0,42,3606	0/0:14,0:14:27.09:0,27,2709	0/0:34,0:34:99:0,99,10395	0/0:33,0:33:90.31:0,90,8868	0/0:26,0:26:66.23:0,66,5529	1/1:2,20:22:21.07:1493,21,0	0/0:31,0:30:87.30:0,87,8314	0/0:32,0:32:87.27:0,87,7285	0/0:30,0:30:78.27:0,78,9132	0/0:16,0:16:45.15:0,45,2494	0/0:19,0:19:54.17:0,54,4815	0/0:54,0:54:99:0,150,15304	0/0:17,0:17:48.16:0,48,4467	0/0:9,0:9:21.07:0,21,1348	0/0:44,0:44:99:0,105,10385	1/1:0,13:13:18.06:1280,18,0	1/1:3,15:18:35.87:1291,36,0	1/1:7,22:29:18.04:1280,18,0	1/1:0,10:10:12.04:853,12,0
chr10	2640166	.	C	CA	791.46	PASS	AB=0.887;AC=11;AF=0.196;AN=56;BaseQRankSum=-2.865;DP=569;FS=1.906;HRun=14;HaplotypeScore=102.8483;InbreedingCoeff=0.4191;MQ=66.42;MQ0=2;MQRankSum=0.187;QD=4.55;ReadPosRankSum=-4.901;VQSLOD=0.8211;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:26:26.04:0,26,85	0/0:11,0:12:13.76:0,14,88	0/0:18,0:15:12.90:0,13,64	0/0:14,0:10:4.84:0,5,50	0/0:24,0:25:15.04:0,15,146	0/0:20,0:22:33.69:0,34,216	0/0:15,0:20:28.64:0,29,158	1/1:4,23:28:46.53:503,47,0	0/1:21,0:23:13.49:13,0,131	0/0:26,0:28:32.20:0,32,189	0/1:12,1:15:5.57:6,0,83	0/0:25,0:27:21.23:0,21,126	0/0:21,1:22:2.83:0,3,146	0/0:27,0:30:12.39:0,12,150	1/1:10,2:12:13.22:99,13,0	0/0:11,0:11:11.71:0,12,77	0/1:8,15:24:8.74:158,0,9	0/0:21,0:22:23.63:0,24,156	0/0:24,0:25:27.89:0,28,177	0/0:15,0:16:25.43:0,25,159	0/0:16,0:15:29.50:0,30,191	0/0:16,1:19:1.19:0,1,120	0/1:11,1:12:2.74:3,0,111	0/1:34,1:39:1.93:2,0,240	1/1:9,12:21:18:158,18,0	0/0:5,0:15:19.14:0,19,66	0/0:3,0:15:22.65:0,23,65	0/0:0,0:10:16.30:0,16,47
chr10	2642464	.	GAACTT	G	2562.14	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.695;DP=702;FS=1.219;HRun=0;HaplotypeScore=135.1545;InbreedingCoeff=0.9974;MQ=91.11;MQ0=0;MQRankSum=-7.091;QD=48.34;ReadPosRankSum=-1.901;VQSLOD=3.6930;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,117,3616	0/0:9,0:9:27.07:0,27,766	0/0:30,0:30:81.25:0,81,2328	0/0:29,0:29:81.71:0,82,2247	0/0:26,0:26:78.27:0,78,2418	0/0:20,0:20:57.20:0,57,1701	0/0:25,0:25:72.24:0,72,2107	1/1:5,21:26:63.20:1237,63,0	0/0:25,0:24:75.26:0,75,2276	0/0:29,0:29:87.30:0,87,2692	0/0:27,0:27:75.25:0,75,2200	0/0:25,0:25:72.25:0,72,2214	0/0:27,0:27:78.27:0,78,2407	0/0:22,0:22:66.23:0,66,1944	0/0:36,0:36:99:0,105,3239	0/0:29,0:29:87.30:0,87,2697	1/1:1,26:27:69.24:1447,69,0	0/0:8,0:8:24.08:0,24,744	0/0:21,0:21:54.19:0,54,1582	0/0:33,0:33:99:0,99,3069	0/0:31,0:31:90.31:0,90,2738	0/0:17,0:17:48.15:0,48,1363	0/0:23,0:23:66.23:0,66,1955	0/0:42,0:42:99:0,123,3654	0/0:23,0:23:66.23:0,66,1947	0/0:17,0:17:48.16:0,48,1488	0/0:27,0:27:81.28:0,81,2469	0/0:9,0:9:24.08:0,24,742
chr10	2643256	.	T	TTCTGAC	17883.42	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-5.556;DP=633;FS=4.451;HRun=0;HaplotypeScore=122.8363;InbreedingCoeff=0.9851;MQ=73.61;MQ0=0;MQRankSum=-16.842;QD=91.71;ReadPosRankSum=-1.457;VQSLOD=6.4062;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,14:20:54.19:1939,54,0	0/0:3,0:3:9.03:0,9,216	0/0:16,0:16:45.15:0,45,1006	0/0:11,0:11:33.07:0,33,658	0/0:34,0:33:99:0,99,2381	0/0:22,0:22:60.19:0,60,1395	0/0:18,0:18:54.15:0,54,1175	1/1:12,22:40:99:3848,120,0	0/0:17,0:17:51.18:0,51,1226	0/0:38,0:38:99:0,114,2654	0/0:23,0:23:60.21:0,60,1383	0/0:21,0:21:63.22:0,63,1398	0/0:21,0:21:60.19:0,60,1396	0/0:22,0:22:66.23:0,66,1537	1/1:6,23:31:72.25:2566,72,0	0/0:20,0:20:57.20:0,57,1342	1/1:1,15:17:39.13:1401,39,0	0/0:31,0:31:84.29:0,84,1984	0/0:13,0:13:39.13:0,39,827	0/0:28,0:28:78.25:0,78,1708	0/0:24,0:24:69.22:0,69,1611	0/0:22,0:22:60.19:0,60,1374	0/0:35,0:35:99:0,105,2474	0/0:19,0:19:57.20:0,57,1340	1/1:2,15:18:45.15:1617,45,0	1/1:6,26:33:96.33:3281,96,0	1/1:6,24:32:78.27:2801,78,0	1/1:2,2:4:12.04:431,12,0
chr10	2643976	.	G	GA	2713.88	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-4.689;DP=663;FS=0.813;HRun=9;HaplotypeScore=71.8891;InbreedingCoeff=0.9965;MQ=72.48;MQ0=1;MQRankSum=-0.721;QD=18.09;ReadPosRankSum=1.538;VQSLOD=3.9106;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,39:43:99:1185,108,0	0/0:9,0:9:23.99:0,24,208	0/0:14,0:12:23.96:0,24,202	0/0:15,0:14:34.53:0,35,274	0/0:25,0:26:67.96:0,68,569	0/0:18,1:19:47.98:0,48,416	0/0:26,0:27:71.02:0,71,605	0/0:35,0:35:77.94:0,78,677	0/0:27,0:27:65.94:0,66,569	0/0:28,1:29:41.80:0,42,592	0/0:17,0:17:47.99:0,48,417	0/0:23,0:23:65.95:0,66,565	0/0:23,0:23:62.99:0,63,547	0/0:21,0:21:59.99:0,60,521	1/1:3,0:27:48.33:242,48,0	0/0:22,0:23:62.02:0,62,526	0/0:26,0:26:62.97:0,63,547	0/0:22,0:22:53.98:0,54,469	0/0:22,0:22:56.96:0,57,489	0/0:22,0:22:50.94:0,51,439	0/0:23,1:24:26.80:0,27,461	0/0:25,0:26:68.01:0,68,579	0/0:22,0:22:62.96:0,63,543	0/0:40,0:40:99:0,111,963	1/1:3,2:19:31.42:175,31,0	1/1:5,16:21:22.06:462,22,0	1/1:3,24:27:37.57:638,38,0	1/1:3,9:12:18.05:199,18,0
chr10	2644673	.	AG	A	1876.96	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.482;DP=688;FS=10.066;HRun=1;HaplotypeScore=66.4889;InbreedingCoeff=0.9977;MQ=91.15;MQ0=0;MQRankSum=-4.584;QD=39.10;ReadPosRankSum=3.120;VQSLOD=3.9236;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,48:48:99:1972,141,0	0/0:8,0:8:24.08:0,24,381	0/0:27,0:27:78.26:0,78,1200	0/0:31,0:31:93.22:0,93,1318	0/0:31,0:31:90.26:0,90,1388	0/0:19,0:19:57.19:0,57,908	0/0:27,0:27:81.26:0,81,1269	0/0:32,0:32:96.33:0,96,1534	0/0:26,0:26:78.22:0,78,1187	0/0:24,0:24:72.25:0,72,1150	0/0:19,0:19:57.19:0,57,908	0/0:20,0:20:60.20:0,60,959	0/0:18,0:18:54.18:0,54,863	0/0:28,0:28:84.26:0,84,1318	0/0:19,0:19:57.19:0,57,911	0/0:13,0:13:39.13:0,39,624	0/0:30,0:30:90.29:0,90,1412	0/0:16,0:16:48.16:0,48,767	0/0:27,0:27:78.24:0,78,1182	0/0:24,0:24:69.21:0,69,1055	0/0:25,0:25:75.26:0,75,1193	0/0:25,0:25:72.23:0,72,1126	0/0:22,0:22:66.21:0,66,1027	0/0:26,0:26:78.27:0,78,1239	0/0:35,0:35:99:0,105,1677	0/0:20,0:20:60.20:0,60,958	0/0:37,0:37:99:0,111,1770	0/0:11,0:11:33.11:0,33,527
chr10	2644893	.	CTTCT	C	397.28	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=0.192;DP=524;FS=0.861;HRun=0;HaplotypeScore=99.9477;InbreedingCoeff=0.8781;MQ=71.96;MQ0=15;MQRankSum=-0.699;QD=12.04;ReadPosRankSum=1.329;VQSLOD=3.2114;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:32.29:0,32,370	0/0:8,0:8:22.77:0,23,239	0/0:30,0:18:47.03:0,47,501	0/0:34,0:16:35.70:0,36,348	0/0:24,0:23:61.67:0,62,628	0/0:18,0:18:45.01:0,45,464	0/0:12,0:12:20.88:0,21,165	0/0:21,0:21:59.99:0,60,553	0/0:15,0:15:12.44:0,12,246	0/0:32,0:32:90.16:0,90,1167	0/0:22,0:22:65.65:0,66,695	0/0:16,0:16:45.08:0,45,619	0/0:13,0:13:31.54:0,32,382	0/0:16,0:17:46.78:0,47,575	1/1:16,1:18:34.90:444,35,0	0/0:12,0:12:34.78:0,35,472	0/0:14,0:14:18.93:0,19,438	0/0:22,0:21:63:0,63,869	0/0:10,0:10:24.02:0,24,220	0/0:27,0:27:68.80:0,69,658	0/0:7,0:7:21.03:0,21,260	0/0:16,0:16:45.51:0,46,518	0/0:19,0:19:48.02:0,48,552	0/0:18,0:18:44.41:0,44,463	1/1:1,14:14:3.01:63,3,0	0/0:21,0:20:60.01:0,60,701	0/0:24,0:24:66.03:0,66,831	0/0:21,0:21:53.93:0,54,544
chr10	2644894	.	TTC	T	82.28	PASS	AB=0.946;AC=10;AF=0.200;AN=50;BaseQRankSum=1.216;DP=590;FS=36.968;HRun=0;HaplotypeScore=94.7476;InbreedingCoeff=0.4786;MQ=68.09;MQ0=17;MQRankSum=0.750;QD=0.68;ReadPosRankSum=2.460;VQSLOD=-0.0914;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:20:11.03:70,11,0	0/0:9,0:10:8.98:0,9,74	./.	./.	0/1:28,2:28:27.92:28,0,81	0/0:25,0:25:8.98:0,9,74	0/0:9,0:14:3.01:0,3,33	0/0:29,0:29:11.38:0,11,64	1/1:11,3:15:5.52:46,6,0	0/0:33,0:32:23.75:0,24,179	0/0:24,0:24:28.11:0,28,230	0/0:17,0:17:21.09:0,21,191	0/0:16,0:16:12.02:0,12,133	0/0:19,0:20:21.28:0,21,193	1/1:19,0:19:9.38:49,9,0	0/0:12,0:12:12.45:0,12,117	0/0:17,0:17:14.91:0,15,130	0/0:22,1:22:3.50:0,4,289	./.	0/0:29,0:29:14.95:0,15,118	0/0:9,0:9:6:0,6,51	0/0:21,0:20:18.44:0,18,149	0/0:16,0:20:8.45:0,8,73	0/1:20,1:21:15.09:15,0,138	1/1:16,0:15:2.84:14,3,0	0/0:27,0:26:18.98:0,19,256	0/0:28,0:28:4.73:0,5,267	0/0:22,0:22:15.61:0,16,130
chr10	2644941	.	C	CCTTT	1178.65	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=3.831;DP=555;FS=4.052;HRun=0;HaplotypeScore=128.3840;InbreedingCoeff=0.8524;MQ=63.03;MQ0=10;MQRankSum=-6.388;QD=22.67;ReadPosRankSum=-4.088;VQSLOD=2.5589;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:46.42:0,46,800	0/0:7,0:7:15.05:0,15,224	0/0:16,0:11:27.09:0,27,455	0/0:18,0:13:25.85:0,26,438	0/0:18,0:18:39.11:0,39,657	0/0:18,0:19:28.69:0,29,421	0/0:9,0:9:17.19:0,17,311	1/1:31,0:28:48.16:1010,48,0	0/0:17,0:17:45.15:0,45,773	0/0:35,0:36:67.22:0,67,1117	0/0:23,0:23:60.19:0,60,985	0/0:19,0:20:7.55:0,8,728	0/0:16,0:16:24.04:0,24,366	0/0:20,0:20:33.11:0,33,676	0/0:23,0:23:60.20:0,60,1002	0/0:13,0:13:21.07:0,21,363	1/1:9,11:21:11.73:284,12,0	0/0:19,0:18:3.27:0,3,476	0/0:14,0:14:32.96:0,33,510	0/0:22,0:22:55.42:0,55,954	0/0:9,0:9:21.07:0,21,360	0/0:22,0:21:50.29:0,50,820	0/0:23,0:23:34.34:0,34,685	0/0:21,0:21:38.11:0,38,665	0/0:23,0:23:57.02:0,57,984	0/0:24,0:23:45.15:0,45,727	0/0:28,0:28:52.12:0,52,910	0/0:18,0:17:35.32:0,35,532
chr10	2644947	.	T	TTTCT	1212.95	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=4.245;DP=532;FS=3.954;HRun=0;HaplotypeScore=120.7755;InbreedingCoeff=0.7384;MQ=68.13;MQ0=6;MQRankSum=-6.623;QD=17.84;ReadPosRankSum=-4.179;VQSLOD=2.7727;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:49.43:0,49,839	0/0:6,0:6:15.05:0,15,224	0/0:20,0:15:27.09:0,27,455	0/0:21,0:16:25.85:0,26,438	0/0:17,0:17:39.11:0,39,657	0/0:14,0:14:29.01:0,29,422	0/0:9,0:9:18.06:0,18,313	1/1:16,14:29:45.12:907,45,0	0/0:16,0:16:45.15:0,45,773	0/0:33,0:33:67.19:0,67,1117	0/0:22,0:22:60.19:0,60,985	0/0:21,0:21:7.55:0,8,728	0/0:16,0:16:24.04:0,24,366	0/0:17,0:17:33.33:0,33,676	0/0:22,0:22:60.20:0,60,1002	0/0:10,0:10:21.07:0,21,363	1/1:20,0:20:18.06:409,18,0	0/1:18,0:18:25.58:26,0,472	0/0:14,0:14:33.09:0,33,511	0/0:22,0:22:55.42:0,55,954	0/0:9,0:9:21.07:0,21,360	0/0:23,0:22:50.44:0,50,821	0/0:24,0:24:34.34:0,34,685	0/0:22,0:22:41.97:0,42,719	0/0:24,0:24:57.19:0,57,984	0/0:20,0:20:45.15:0,45,727	0/0:22,0:22:52.09:0,52,910	0/0:16,0:15:36.09:0,36,533
chr10	2646787	.	C	CATAA	7063.52	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-5.910;DP=560;FS=0.409;HRun=0;HaplotypeScore=84.2381;InbreedingCoeff=0.9886;MQ=95.70;MQ0=1;MQRankSum=-5.342;QD=60.89;ReadPosRankSum=0.503;VQSLOD=6.5649;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,27:32:60.01:1416,60,0	0/0:6,0:6:15.05:0,15,289	0/0:26,0:26:69.18:0,69,1252	0/0:29,0:29:74.43:0,74,1475	0/0:10,0:10:27.09:0,27,536	0/0:13,0:13:36.12:0,36,718	0/0:21,0:21:63.13:0,63,1078	0/0:25,0:25:75.23:0,75,1384	0/0:18,0:18:54.19:0,54,1065	0/0:14,0:14:42.14:0,42,839	0/0:15,0:15:45.12:0,45,812	0/0:26,0:26:78.24:0,78,1486	0/0:30,0:30:90.30:0,90,1748	0/0:19,0:19:54.16:0,54,1040	1/1:2,25:26:69.15:1791,69,0	0/0:17,0:17:51.14:0,51,934	0/0:32,0:31:90.27:0,90,1724	0/0:19,0:19:51.10:0,51,937	0/0:30,0:30:87.22:0,87,1647	0/0:18,0:18:54.19:0,54,1077	0/0:30,0:30:87.24:0,87,1558	0/0:15,0:15:39.13:0,39,778	0/0:25,0:25:69.20:0,69,1292	0/0:6,0:6:18.06:0,18,359	1/1:1,11:14:33.07:844,33,0	1/1:1,16:20:57.13:1275,57,0	1/1:2,15:18:51.18:1402,51,0	1/1:0,4:5:12.04:336,12,0
chr10	2647012	.	CGTGTGTGT	C	390.49	PASS	AC=4;AF=0.077;AN=52;BaseQRankSum=3.803;DP=591;FS=1.188;HRun=0;HaplotypeScore=145.7584;InbreedingCoeff=0.8232;MQ=68.90;MQ0=13;MQRankSum=-3.849;QD=7.66;ReadPosRankSum=0.986;VQSLOD=2.5364;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:27:27.04:0,27,467	0/0:12,0:12:15.04:0,15,420	./.	./.	0/0:18,0:19:21.07:0,21,722	0/0:22,0:24:11.09:0,11,467	0/0:20,0:20:24.54:0,25,697	0/0:25,0:25:6.02:0,6,139	0/0:22,0:23:33.08:0,33,976	0/0:21,0:21:21.04:0,21,499	0/0:12,0:12:18.06:0,18,590	0/0:21,0:22:24.08:0,24,781	0/0:24,0:25:29.71:0,30,905	0/0:14,0:14:9:0,9,236	1/1:17,6:25:8.86:145,9,0	0/0:12,0:13:30.09:0,30,917	0/0:24,0:27:41.96:0,42,1342	0/0:19,0:18:22.89:0,23,568	0/0:18,0:18:15.02:0,15,368	0/0:24,0:24:32.58:0,33,1234	0/0:26,0:25:24.46:0,24,788	0/0:14,0:15:14.85:0,15,434	0/0:17,0:17:24.02:0,24,482	0/0:32,0:33:40.71:0,41,1698	1/1:17,9:26:18.48:357,18,0	0/0:20,0:20:33.10:0,33,808	0/0:15,0:18:33.11:0,33,976	0/0:6,0:7:12.04:0,12,432
chr10	2647150	.	G	GCT	8827.21	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-15.877;DP=638;FS=5.153;HRun=0;HaplotypeScore=71.4536;InbreedingCoeff=0.9948;MQ=88.54;MQ0=4;MQRankSum=-3.328;QD=42.24;ReadPosRankSum=0.719;VQSLOD=6.4733;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,27:28:54.19:958,54,0	0/0:4,0:4:12.04:0,12,165	0/0:24,0:24:69.21:0,69,906	0/0:26,0:26:63:0,63,812	0/0:22,0:22:66.21:0,66,890	0/0:26,0:26:72.24:0,72,989	0/0:17,0:17:51.17:0,51,701	1/1:3,27:31:84.26:1431,84,0	0/0:26,0:26:72.22:0,72,960	0/0:27,0:27:78.25:0,78,1058	0/0:15,0:15:42.14:0,42,577	0/0:24,0:24:69.22:0,69,931	0/0:22,0:22:63.20:0,63,849	0/0:18,0:18:54.18:0,54,742	1/1:2,32:33:81.28:1437,81,0	0/0:21,0:21:60.18:0,60,807	1/1:1,33:34:81.28:1437,81,0	0/0:19,0:19:57.19:0,57,780	0/0:17,0:17:51.15:0,51,682	0/0:24,0:24:69.23:0,69,947	0/0:26,0:26:78.26:0,78,1072	0/0:21,0:21:63.18:0,63,819	0/0:25,0:25:72.24:0,72,989	0/0:25,0:25:72.23:0,72,974	1/1:0,21:21:54.19:957,54,0	1/1:2,17:19:45.15:799,45,0	1/1:1,29:28:69.24:1224,69,0	1/1:0,11:11:33.11:585,33,0
chr10	2647505	.	GCCATAAGA	G	8360.61	PASS	AB=0.549;AC=11;AF=0.196;AN=56;BaseQRankSum=14.550;DP=691;FS=5.572;HRun=0;HaplotypeScore=173.8466;InbreedingCoeff=0.8731;MQ=81.46;MQ0=0;MQRankSum=-14.620;QD=62.39;ReadPosRankSum=2.008;VQSLOD=4.1127;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,35:39:60.16:1642,60,0	0/0:4,0:4:12.04:0,12,543	0/0:23,0:23:66.18:0,66,2402	0/0:17,0:17:45.12:0,45,1581	0/0:26,0:26:78.27:0,78,3519	0/0:21,0:21:63.22:0,63,2686	0/0:35,0:35:99:0,102,4148	0/0:34,0:34:99:0,102,4405	0/0:28,0:28:81.28:0,81,3480	0/0:36,0:36:99:0,108,4528	0/0:9,0:9:24.07:0,24,967	0/0:33,0:33:99:0,99,4325	0/0:33,0:33:99:0,99,4100	0/0:29,0:29:87.30:0,87,3799	1/1:0,28:28:69.24:2017,69,0	0/0:31,0:31:93.32:0,93,3895	0/0:30,0:30:81.28:0,81,3635	0/0:14,0:14:39.13:0,39,1689	0/0:19,0:19:57.20:0,57,2466	0/0:23,0:23:66.12:0,66,2777	0/0:39,0:39:99:0,114,4479	0/0:24,0:24:72.25:0,72,2946	0/0:19,0:19:57.20:0,57,2576	0/0:30,0:30:90.31:0,90,3939	1/1:1,13:14:33.11:914,33,0	0/1:5,23:28:99:1770,0,330	1/1:0,20:20:57.20:1666,57,0	1/1:0,5:5:12.04:351,12,0
chr10	2647845	.	TA	T	5185.24	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=14.572;DP=598;FS=0.000;HRun=1;HaplotypeScore=81.7091;InbreedingCoeff=0.9992;MQ=73.06;MQ0=1;MQRankSum=-0.162;QD=26.19;ReadPosRankSum=1.029;VQSLOD=4.6575;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:32,0:32:50.31:282,50,0	0/0:9,0:9:24.07:0,24,340	0/0:26,0:24:52.39:0,52,681	0/0:11,0:11:24.52:0,25,334	0/0:21,0:21:51.93:0,52,739	0/0:36,0:36:99:0,108,1454	0/0:21,0:21:59.74:0,60,788	1/1:0,3:26:74.58:616,75,0	0/0:17,0:17:51.17:0,51,754	0/0:20,0:20:57.09:0,57,758	0/0:16,0:16:43.54:0,44,638	0/0:15,0:15:45.11:0,45,632	0/0:21,0:21:63.18:0,63,886	0/0:21,0:21:62.65:0,63,871	1/1:3,27:30:90.28:1210,90,0	0/0:23,0:23:60.91:0,61,953	1/1:0,0:39:80.34:571,80,0	0/0:21,0:21:63.16:0,63,872	0/0:18,0:18:54:0,54,695	0/0:29,0:29:75.20:0,75,1035	0/0:17,0:17:47.64:0,48,694	0/0:28,0:28:80.79:0,81,1108	0/0:17,0:17:51.15:0,51,704	0/0:13,0:13:39.08:0,39,544	1/1:5,13:18:54.07:660,54,0	1/1:0,14:14:42.03:514,42,0	1/1:2,24:27:69.19:922,69,0	1/1:0,11:11:30.10:409,30,0
chr10	2647855	.	CTT	C	457.04	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.491;DP=634;FS=16.341;HRun=6;HaplotypeScore=115.0218;InbreedingCoeff=0.8534;MQ=74.35;MQ0=1;MQRankSum=-2.871;QD=13.85;ReadPosRankSum=0.854;VQSLOD=0.1519;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,29:33:42.13:552,42,0	0/0:9,0:9:21.07:0,21,367	0/0:22,0:21:44.32:0,44,586	0/0:14,0:14:14.59:0,15,285	0/0:23,0:23:63.18:0,63,995	0/0:40,0:40:99:0,114,1860	0/0:22,0:22:63.22:0,63,1080	0/0:22,0:22:44.77:0,45,477	0/0:19,0:19:48.16:0,48,809	0/0:20,0:20:60.19:0,60,962	0/0:19,0:19:51.15:0,51,793	0/0:16,0:16:45.15:0,45,780	0/0:24,0:24:66.17:0,66,1081	0/0:21,0:21:59.67:0,60,948	0/0:36,0:36:24.69:0,25,64	0/0:27,0:27:81.27:0,81,1363	0/0:39,0:38:90.06:0,90,933	0/0:22,0:22:63.22:0,63,1079	0/0:15,0:15:45.15:0,45,755	0/0:32,0:32:78.24:0,78,1265	0/0:17,0:17:45.60:0,46,732	0/0:27,0:27:75.25:0,75,1272	0/0:25,0:25:69.20:0,69,1138	0/0:16,0:16:48.16:0,48,828	0/0:17,0:17:10.53:0,11,27	0/0:14,0:14:10.62:0,11,48	0/0:30,0:30:18.19:0,18,120	0/0:12,0:12:9.15:0,9,23
chr10	2647884	.	GAGTC	G	2099.20	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.967;DP=620;FS=11.000;HRun=0;HaplotypeScore=119.9906;InbreedingCoeff=0.9834;MQ=77.36;MQ0=1;MQRankSum=-5.436;QD=41.16;ReadPosRankSum=1.879;VQSLOD=3.3722;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:66.20:0,66,1654	0/0:7,0:7:21.07:0,21,554	0/0:17,0:16:24.29:0,24,558	0/0:13,0:13:12.82:0,13,406	0/0:21,0:21:57.20:0,57,1504	0/0:34,0:34:99:0,99,2446	0/0:27,0:27:69.20:0,69,1712	0/0:30,0:30:87.29:0,87,2236	0/0:19,0:19:57.18:0,57,1449	0/0:17,0:17:42.14:0,42,1065	0/0:20,0:20:54.19:0,54,1385	0/0:12,0:12:36.12:0,36,951	0/0:19,0:19:54.19:0,54,1416	0/0:20,0:20:42.14:0,42,1109	1/1:3,30:33:96.28:1670,96,0	0/0:22,0:22:66.23:0,66,1712	0/0:34,0:34:87.28:0,87,2200	0/0:19,0:19:57.17:0,57,1447	0/0:23,0:23:63.21:0,63,1564	0/0:20,0:20:54.19:0,54,1426	0/0:18,0:18:54.19:0,54,1393	0/0:29,0:29:75.24:0,75,1920	0/0:28,0:28:78.25:0,78,1944	0/0:22,0:22:66.23:0,66,1710	1/1:5,13:17:30.10:551,30,0	0/0:20,0:20:60.21:0,60,1557	0/0:26,0:26:71.75:0,72,1828	0/0:14,0:14:42.14:0,42,1075
chr10	2648556	.	AT	A	684.97	PASS	AB=0.841;AC=14;AF=0.250;AN=56;BaseQRankSum=7.132;DP=491;FS=2.947;HRun=13;HaplotypeScore=63.6679;InbreedingCoeff=0.5916;MQ=78.91;MQ0=0;MQRankSum=2.247;QD=4.08;ReadPosRankSum=2.680;VQSLOD=0.8013;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:22:21.88:0,22,106	0/0:5,0:5:9.01:0,9,83	0/0:17,1:18:0.19:0,0,113	0/0:16,0:16:9.59:0,10,95	0/1:13,2:15:19.88:20,0,128	0/0:27,1:28:38.20:0,38,528	0/0:17,0:17:45.06:0,45,433	1/1:6,0:34:49.34:144,49,0	0/0:18,0:18:27.02:0,27,252	0/0:17,0:18:23.98:0,24,213	0/1:15,3:18:7.77:8,0,250	0/0:16,1:18:9.95:0,10,195	0/0:19,0:19:39.01:0,39,355	0/0:17,0:17:35.96:0,36,320	0/0:7,1:20:19.33:0,19,100	0/0:14,0:14:35.93:0,36,323	1/1:4,1:22:29.43:98,29,0	0/0:18,0:18:38.85:0,39,333	0/1:11,3:14:17.12:17,0,139	0/1:9,2:12:0.85:1,0,174	0/0:10,0:10:21.02:0,21,199	0/0:22,0:22:18.93:0,19,325	0/0:11,2:13:10.96:0,11,231	0/0:15,0:15:30.05:0,30,292	0/0:1,0:14:17.04:0,17,86	1/1:8,12:21:25.75:181,26,0	1/1:12,14:26:38.67:284,39,0	1/1:0,5:5:14.91:109,15,0
chr10	2648644	.	A	AAC	375.66	PASS	AB=1.000;AC=17;AF=0.447;AN=38;BaseQRankSum=1.715;DP=401;FS=6.451;HRun=0;HaplotypeScore=65.2419;InbreedingCoeff=0.2981;MQ=56.61;MQ0=8;MQRankSum=-0.699;QD=2.68;ReadPosRankSum=-0.783;VQSLOD=0.7833;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:23:2.84:0,3,14	./.	./.	./.	0/1:10,0:9:0:0,0,0	0/0:15,0:14:2.63:0,3,32	./.	./.	0/0:10,0:10:3:0,3,32	1/1:7,0:7:0.47:1,0,0	./.	./.	0/0:12,0:12:2.96:0,3,31	0/0:7,0:7:3:0,3,32	0/0:14,0:15:2.74:0,3,14	0/1:10,0:10:0:0,0,0	1/1:23,0:23:20.93:181,21,0	0/1:17,0:17:9.58:10,0,54	./.	0/0:5,0:5:3:0,3,32	0/0:27,0:26:3.47:0,3,33	0/1:11,0:11:6.88:38,0,7	0/1:11,0:11:0.01:0,0,0	1/1:17,4:25:3.01:44,3,0	./.	1/1:9,0:10:9.02:102,9,0	1/1:10,0:12:9.01:87,9,0	1/1:0,0:2:3:26,3,0
chr10	2648841	.	TC	T	1721.64	PASS	AB=0.914;AC=14;AF=0.250;AN=56;BaseQRankSum=3.542;DP=329;FS=0.501;HRun=9;HaplotypeScore=45.4978;InbreedingCoeff=0.7164;MQ=78.59;MQ0=0;MQRankSum=-3.000;QD=15.37;ReadPosRankSum=2.710;VQSLOD=3.3590;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,25:30:69.03:631,69,0	0/0:2,0:2:3.01:0,3,35	0/0:20,0:18:13.77:0,14,308	0/0:22,0:22:22.14:0,22,374	0/0:5,0:5:15.04:0,15,173	0/0:10,0:11:29.92:0,30,326	0/1:12,1:13:9.42:9,0,147	0/0:7,0:11:14.65:0,15,101	0/0:8,0:8:24.07:0,24,277	0/0:15,0:15:34.34:0,34,384	0/0:2,0:2:3.01:0,3,35	0/0:12,0:12:30.08:0,30,336	0/0:12,0:12:20.80:0,21,241	0/0:10,0:10:30.07:0,30,335	1/1:5,18:23:57.03:520,57,0	0/0:11,0:11:27.08:0,27,312	0/0:5,0:10:20.01:0,20,106	0/0:8,0:8:21.06:0,21,242	0/0:9,0:9:24.04:0,24,256	0/0:6,0:6:15.04:0,15,173	0/0:17,1:18:17.67:0,18,457	0/1:8,1:9:6.39:6,0,186	0/0:5,0:5:15.04:0,15,173	0/0:18,1:19:11.64:0,12,379	1/1:1,7:8:18:165,18,0	1/1:5,2:7:2.98:27,3,0	1/1:2,12:14:36.02:329,36,0	1/1:2,6:8:24:215,24,0
chr10	2648850	.	CA	C	368.10	PASS	AB=0.953;AC=7;AF=0.125;AN=56;BaseQRankSum=8.436;DP=353;FS=8.668;HRun=1;HaplotypeScore=54.4920;InbreedingCoeff=0.3111;MQ=83.97;MQ0=0;MQRankSum=-3.672;QD=4.18;ReadPosRankSum=4.458;VQSLOD=0.2584;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:28,1:29:19.60:134,0,20	0/0:1,0:1:3.01:0,3,41	0/0:25,0:22:30.08:0,30,469	0/0:24,0:24:17.97:0,18,496	0/0:5,0:5:15.05:0,15,201	0/0:12,0:12:35.89:0,36,404	0/0:12,0:12:18.64:0,19,244	0/0:14,0:14:29.81:0,30,248	0/0:10,0:10:30.05:0,30,363	0/0:13,0:13:34.41:0,34,461	0/0:2,0:2:5.81:0,6,53	0/0:11,0:11:30.03:0,30,349	0/0:9,0:9:19.85:0,20,215	0/0:12,0:12:33.04:0,33,389	0/1:22,3:25:15.85:157,0,16	0/0:12,0:12:33.08:0,33,414	0/0:12,0:12:26.14:0,26,178	0/0:12,0:12:32.88:0,33,364	0/0:10,0:10:23.89:0,24,248	0/0:5,0:5:15.05:0,15,202	0/0:25,0:25:64.12:0,64,717	0/0:10,0:10:12.09:0,12,285	0/0:6,0:6:18.03:0,18,201	0/0:16,0:16:42.85:0,43,536	0/1:11,0:11:21.66:22,0,77	0/0:7,0:7:8:0,8,80	1/1:14,0:14:7.36:87,7,0	1/1:7,2:9:1.56:93,2,0
chr10	2649582	.	GATCCTT	G	2166.85	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.138;DP=652;FS=11.742;HRun=0;HaplotypeScore=151.9573;InbreedingCoeff=0.9918;MQ=92.91;MQ0=0;MQRankSum=-9.489;QD=52.85;ReadPosRankSum=1.626;VQSLOD=3.2917;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:88.34:0,88,2759	0/0:5,0:5:15.05:0,15,550	0/0:24,0:24:72.25:0,72,2344	0/0:32,0:32:90.78:0,91,2998	0/0:40,0:40:99:0,118,4151	0/0:26,0:26:75.26:0,75,2731	0/0:16,0:16:45.15:0,45,1560	0/0:24,0:24:72.24:0,72,2513	0/0:27,0:27:78.27:0,78,2789	0/0:15,0:15:45.15:0,45,1595	0/0:31,0:31:93.32:0,93,3344	0/0:21,0:21:60.21:0,60,2150	0/0:17,0:17:51.18:0,51,1865	0/0:25,0:25:75.26:0,75,2732	1/1:1,19:20:48.16:1181,48,0	0/0:12,0:12:36.12:0,36,1319	0/0:29,0:29:87.30:0,87,3145	0/0:27,0:27:81.25:0,81,2744	0/0:15,0:15:45.15:0,45,1509	0/0:24,0:24:72.25:0,72,2566	0/0:32,0:32:96.33:0,96,3484	0/0:18,0:18:54.19:0,54,1978	0/0:14,0:14:39.13:0,39,1365	0/0:32,0:32:96.33:0,96,3495	1/1:1,20:21:45.15:1108,45,0	0/0:25,0:25:75.26:0,75,2035	0/0:20,0:20:57.20:0,57,1552	0/0:20,0:20:60.21:0,60,1661
chr10	2649648	.	GC	G	889.63	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.421;DP=542;FS=0.708;HRun=5;HaplotypeScore=66.6905;InbreedingCoeff=0.9823;MQ=90.62;MQ0=0;MQRankSum=-3.439;QD=21.70;ReadPosRankSum=2.161;VQSLOD=2.8584;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,40:41:87.25:984,87,0	0/0:5,0:5:15.05:0,15,205	0/0:20,0:20:54.16:0,54,696	0/0:23,0:23:48.09:0,48,666	0/0:18,0:18:54.15:0,54,703	0/0:22,0:22:60.20:0,60,821	0/0:27,0:27:81.26:0,81,1091	0/0:18,0:18:42.14:0,42,574	0/0:22,0:22:63.21:0,63,860	0/0:13,0:13:27.09:0,27,369	0/0:20,0:20:51.14:0,51,662	0/0:14,0:14:36.12:0,36,491	0/0:12,0:12:30.06:0,30,375	0/0:25,0:25:69.22:0,69,929	0/0:21,0:21:54.18:0,54,734	0/0:13,0:13:39.13:0,39,533	0/0:17,0:17:42.14:0,42,573	0/0:20,0:20:54.18:0,54,727	0/0:19,0:19:54.17:0,54,721	0/0:15,0:15:45.11:0,45,579	0/0:26,0:26:72.24:0,72,983	0/0:13,0:13:33.11:0,33,448	0/0:12,0:12:36.09:0,36,471	0/0:28,0:28:78.26:0,78,1065	0/0:21,0:21:39.12:0,39,495	0/0:23,0:23:66.22:0,66,901	0/0:17,0:17:48.16:0,48,651	0/0:17,0:17:48.16:0,48,654
chr10	2650024	.	AGT	A	7299.36	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=12.561;DP=629;FS=2.392;HRun=0;HaplotypeScore=82.2002;InbreedingCoeff=0.9814;MQ=79.75;MQ0=0;MQRankSum=-7.639;QD=42.69;ReadPosRankSum=1.044;VQSLOD=6.6359;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,41:41:99:1803,111,0	0/0:17,0:17:51.10:0,51,922	0/0:26,0:26:68.35:0,68,1282	0/0:20,0:20:31.48:0,31,847	0/0:31,0:31:93.31:0,93,1849	0/0:19,0:19:57.18:0,57,1100	0/0:24,0:24:72.15:0,72,1330	1/1:0,26:26:75.24:1177,75,0	0/0:25,0:25:75.26:0,75,1495	0/0:27,0:27:81.26:0,81,1590	0/0:27,0:27:75.26:0,75,1507	0/0:20,0:20:60.21:0,60,1214	0/0:24,0:24:72.23:0,72,1373	0/0:21,0:21:54.17:0,54,1050	1/1:0,14:14:39.13:634,39,0	0/0:21,0:21:54.17:0,54,1059	1/1:0,29:29:78.27:1268,78,0	0/0:18,0:18:45.15:0,45,913	0/0:18,0:18:54.13:0,54,980	0/0:25,0:25:72.25:0,72,1427	0/0:29,0:29:87.30:0,87,1737	0/0:29,0:29:81.28:0,81,1630	0/0:13,0:13:39.13:0,39,766	0/0:24,0:24:63.20:0,63,1225	1/1:0,12:12:21.07:341,21,0	1/1:0,21:21:60.03:839,60,0	1/1:0,26:26:72.25:1169,72,0	1/1:2,0:2:5.98:69,6,0
chr10	2650297	.	C	CCTCT	8746.27	PASS	AB=0.790;AC=21;AF=0.404;AN=52;BaseQRankSum=8.194;DP=554;FS=26.184;HRun=0;HaplotypeScore=101.4781;InbreedingCoeff=0.0608;MQ=63.05;MQ0=21;MQRankSum=-5.137;QD=25.88;ReadPosRankSum=5.292;VQSLOD=2.9448;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,17:15:42.14:1214,42,0	0/0:7,0:7:21.07:0,21,441	0/0:35,0:17:32.93:0,33,658	0/0:39,0:24:62.80:0,63,1056	0/0:21,0:21:63.17:0,63,1278	0/1:18,10:28:99:785,0,986	0/0:24,0:23:66.23:0,66,1383	./.	0/1:16,2:16:99:125,0,832	0/0:22,0:22:63.17:0,63,1277	0/0:16,1:17:28.17:0,28,923	0/1:19,5:22:99:376,0,823	0/1:21,5:27:99:356,0,1184	0/1:16,5:21:99:374,0,822	1/1:0,4:4:12.04:345,12,0	0/1:18,1:18:35.51:36,0,929	1/1:5,3:5:6.02:173,6,0	0/1:28,5:30:99:347,0,1423	0/1:14,3:15:99:216,0,710	0/0:14,0:14:33.07:0,33,649	0/1:33,26:56:99:2098,0,1599	0/0:24,0:22:63.17:0,63,1262	0/0:10,0:10:30.10:0,30,629	0/1:28,16:44:99:1118,0,1392	./.	0/1:1,9:10:29.81:752,0,30	1/1:0,3:4:6.86:256,7,0	1/1:0,2:2:6.02:174,6,0
chr10	2650843	.	CT	C	1448.41	PASS	AB=0.765;AC=10;AF=0.185;AN=54;BaseQRankSum=4.916;DP=388;FS=18.793;HRun=1;HaplotypeScore=46.0115;InbreedingCoeff=0.7411;MQ=78.15;MQ0=1;MQRankSum=-3.272;QD=25.41;ReadPosRankSum=-0.835;VQSLOD=1.9579;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,17:17:39.13:531,39,0	0/0:6,0:6:18.06:0,18,286	0/0:20,0:20:58.73:0,59,840	0/0:24,0:23:42.89:0,43,827	0/0:9,0:9:26.94:0,27,373	0/0:18,0:18:48.16:0,48,745	0/0:16,0:16:48.16:0,48,767	0/1:8,0:8:7.49:7,0,72	0/0:4,0:4:12.04:0,12,192	0/0:11,0:11:33.11:0,33,526	0/0:5,0:5:15.05:0,15,240	0/0:30,0:30:90.25:0,90,1378	0/0:15,0:15:39.13:0,39,620	0/0:29,0:29:87.25:0,87,1351	1/1:0,8:8:18.06:250,18,0	0/0:11,0:11:33.11:0,33,518	0/0:5,0:5:9.55:0,10,55	0/0:14,0:14:42.09:0,42,616	0/0:17,0:17:51.17:0,51,792	0/0:5,0:5:15.05:0,15,236	0/0:43,0:43:99:0,126,1952	0/0:12,0:12:33.10:0,33,499	0/0:9,0:9:27.09:0,27,431	0/0:28,0:28:78.23:0,78,1219	1/1:0,7:7:18.06:251,18,0	0/1:1,8:9:20.70:284,0,21	1/1:0,8:8:21.07:289,21,0	./.
chr10	2651101	.	TA	T	4460.80	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=11.280;DP=610;FS=0.000;HRun=2;HaplotypeScore=59.8860;InbreedingCoeff=0.9929;MQ=88.26;MQ0=0;MQRankSum=-3.034;QD=32.80;ReadPosRankSum=2.481;VQSLOD=4.7724;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,39:41:99:1362,105,0	0/0:16,0:16:48.15:0,48,698	0/0:23,0:23:69.10:0,69,882	0/0:22,0:22:60.62:0,61,825	0/0:25,0:25:72.18:0,72,975	0/0:22,0:22:63.20:0,63,921	0/0:32,0:32:90.27:0,90,1291	0/0:22,0:22:60.16:0,60,824	0/0:20,0:20:60.19:0,60,863	0/0:23,0:23:66.22:0,66,971	0/0:15,0:15:42.13:0,42,606	0/0:20,0:20:60.18:0,60,860	0/0:25,0:25:75.25:0,75,1122	0/0:30,0:30:87.29:0,87,1303	1/1:0,36:36:90.29:1167,90,0	0/0:20,0:20:60.20:0,60,898	0/0:19,0:19:57.19:0,57,854	0/0:20,0:20:57.15:0,57,811	0/0:29,0:29:81.26:0,81,1172	0/0:14,0:14:39.13:0,39,583	0/0:22,0:22:66.18:0,66,910	0/0:19,0:19:57.19:0,57,852	0/0:15,0:15:42.12:0,42,589	0/0:21,0:21:63.20:0,63,923	1/1:1,12:13:36.12:462,36,0	1/1:2,21:23:21.56:773,22,0	1/1:1,18:19:42.12:544,42,0	1/1:0,4:4:12.04:154,12,0
chr10	2651955	.	CAGAG	C	2635.41	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.078;DP=447;FS=1.878;HRun=0;HaplotypeScore=73.8954;InbreedingCoeff=0.9923;MQ=85.97;MQ0=1;MQRankSum=-5.471;QD=45.44;ReadPosRankSum=-0.818;VQSLOD=3.6474;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:63.22:0,63,1668	0/0:9,0:9:27.09:0,27,720	0/0:22,0:22:63.20:0,63,1506	0/0:18,0:18:42.14:0,42,1058	0/0:18,0:18:54.19:0,54,1440	0/0:16,0:16:45.15:0,45,1200	0/0:17,0:17:51.18:0,51,1360	1/1:4,30:34:90.24:1525,90,0	0/0:11,0:11:33.11:0,33,871	0/0:9,0:9:27.09:0,27,707	0/0:14,0:14:42.14:0,42,1120	0/0:16,0:16:48.16:0,48,1264	0/0:16,0:16:48.16:0,48,1270	0/0:13,0:13:39.13:0,39,1040	0/0:18,0:18:54.17:0,54,1376	0/0:8,0:8:24.07:0,24,579	1/1:1,23:23:66.23:1232,66,0	0/0:17,0:17:51.17:0,51,1316	0/0:29,0:29:84.29:0,84,2230	0/0:12,0:12:36.12:0,36,947	0/0:17,0:17:51.18:0,51,1328	0/0:11,0:11:33.11:0,33,879	0/0:7,0:7:18.06:0,18,480	0/0:9,0:9:27.09:0,27,720	0/0:13,0:13:36.12:0,36,928	0/0:18,0:18:54.19:0,54,1441	0/0:19,0:19:54.19:0,54,1439	0/0:9,0:9:27.09:0,27,720
chr10	2652232	.	AT	A	1952.47	PASS	AB=0.880;AC=11;AF=0.196;AN=56;BaseQRankSum=10.335;DP=537;FS=0.898;HRun=10;HaplotypeScore=51.5048;InbreedingCoeff=0.8603;MQ=70.66;MQ0=0;MQRankSum=-0.918;QD=15.87;ReadPosRankSum=0.372;VQSLOD=3.7805;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,114,1248	0/0:13,0:13:36.08:0,36,389	0/0:13,0:13:5.39:0,5,224	0/0:14,0:15:25.66:0,26,269	0/0:21,0:21:63.12:0,63,682	0/0:13,0:13:27.07:0,27,299	0/0:8,0:8:18.05:0,18,199	0/0:27,0:27:65.21:0,65,703	0/0:18,0:18:45.12:0,45,498	0/1:19,3:22:20.98:21,0,467	0/0:22,0:22:57.14:0,57,622	0/0:13,0:13:39.11:0,39,431	0/0:16,0:16:42.08:0,42,446	0/0:18,0:18:51.10:0,51,544	1/1:2,15:17:35.99:313,36,0	0/0:20,1:21:31.09:0,31,563	0/0:29,0:29:81.19:0,81,884	0/0:9,0:9:24.06:0,24,265	0/0:18,1:19:31.08:0,31,563	0/0:30,0:30:90.21:0,90,978	0/0:14,0:14:33.09:0,33,365	0/0:11,0:11:24.05:0,24,257	0/0:26,0:26:72.14:0,72,769	0/0:16,0:16:39.11:0,39,431	1/1:3,20:23:50.98:443,51,0	1/1:2,23:25:65.98:573,66,0	1/1:4,24:28:68.97:599,69,0	1/1:0,8:8:21:182,21,0
chr10	2654107	.	TGG	T	775	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=4.738;DP=539;FS=0.710;HRun=10;HaplotypeScore=66.8675;InbreedingCoeff=0.7900;MQ=62.17;MQ0=7;MQRankSum=2.069;QD=14.90;ReadPosRankSum=2.320;VQSLOD=1.7539;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,32:34:78.21:869,78,0	0/0:6,0:6:9.03:0,9,142	1/1:17,0:6:2.02:6,2,0	0/0:15,0:4:5.70:0,6,31	0/0:24,0:25:71.82:0,72,1005	0/0:19,0:19:51.15:0,51,744	0/0:12,0:12:27.08:0,27,402	0/0:5,0:14:19.16:0,19,222	0/0:13,0:15:37.85:0,38,528	0/0:14,0:14:26.74:0,27,320	0/0:18,0:18:32.58:0,33,454	0/0:16,0:16:42.13:0,42,623	0/0:19,0:19:49.90:0,50,708	0/0:27,0:27:75.24:0,75,1125	0/0:4,0:17:26.09:0,26,92	0/0:19,0:19:54.18:0,54,852	0/0:36,0:37:89.92:0,90,1413	0/0:14,0:14:42.14:0,42,637	0/0:23,0:21:44.51:0,45,635	0/0:19,0:21:23.19:0,23,463	0/0:13,0:12:26.92:0,27,376	0/0:20,0:22:47.52:0,48,684	0/0:22,0:22:48.15:0,48,711	0/0:27,0:27:69.17:0,69,988	0/0:2,0:16:23.71:0,24,84	0/0:23,0:23:45.10:0,45,666	0/0:23,0:23:63.20:0,63,947	0/0:9,0:9:12.04:0,12,173
chr10	2654445	.	GAC	G	1084.43	PASS	AB=0.897;AC=22;AF=0.393;AN=56;BaseQRankSum=8.359;DP=791;FS=22.497;HRun=0;HaplotypeScore=108.4687;InbreedingCoeff=-0.2156;MQ=61.07;MQ0=20;MQRankSum=-2.874;QD=2.16;ReadPosRankSum=1.016;VQSLOD=0.6792;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:50:29.99:0,30,263	0/1:9,1:10:18.60:19,0,166	0/0:64,0:8:0.47:0,0,1	0/0:48,0:10:4.26:0,4,49	0/1:25,0:25:55.91:56,0,411	0/1:26,0:27:37.32:37,0,557	0/1:30,5:35:55.84:56,0,492	0/0:30,0:30:32.96:0,33,351	0/1:29,6:35:16.13:16,0,632	0/1:34,6:40:99:110,0,700	0/1:17,1:19:18.97:19,0,246	0/1:25,8:34:99:105,0,635	0/1:31,0:31:25.66:26,0,735	0/1:28,9:38:82.87:83,0,611	0/0:26,0:26:20.73:0,21,165	0/1:25,1:27:33.34:33,0,520	0/0:6,0:16:17.94:0,18,149	0/1:3,1:4:27.63:28,0,35	0/0:14,0:14:12.93:0,13,184	0/1:15,2:18:99:122,0,231	0/1:20,3:23:3.55:4,0,374	0/0:22,0:21:39.11:0,39,566	0/1:20,2:24:53.99:54,0,377	0/1:42,2:46:10.79:11,0,862	0/0:20,0:20:8.95:0,9,97	1/1:10,0:15:11.36:56,11,0	1/1:16,0:42:71.02:349,71,0	1/1:2,0:8:14.20:70,14,0
chr10	2654479	.	C	CACACACACACACAG	1773.96	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=-0.393;DP=797;FS=1.676;HRun=0;HaplotypeScore=284.1134;InbreedingCoeff=0.7632;MQ=64.36;MQ0=15;MQRankSum=-5.350;QD=20.39;ReadPosRankSum=-2.589;VQSLOD=2.1937;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:40:72.79:0,73,623	0/0:8,0:8:24.03:0,24,672	0/0:51,0:17:34.48:0,34,395	0/0:44,0:18:40.95:0,41,421	0/0:24,0:24:57.51:0,58,1327	0/0:30,0:31:84.07:0,84,2005	0/0:30,0:30:78.70:0,79,1913	0/1:31,0:31:99:139,0,459	0/0:29,0:29:72.12:0,72,2049	0/0:41,0:41:99:0,111,3008	0/0:20,0:20:48.02:0,48,1083	0/0:37,0:37:99:0,99,2624	0/0:29,0:29:81.16:0,81,2589	0/0:35,0:35:77.75:0,78,2512	1/1:9,22:38:17.55:1106,18,0	0/0:21,0:21:60.10:0,60,1713	0/0:22,0:22:51.32:0,51,432	0/0:5,0:5:14.98:0,15,284	0/0:23,0:23:50.35:0,50,898	0/0:25,0:25:69:0,69,1286	0/0:35,0:34:95.80:0,96,1611	0/0:24,0:23:66.08:0,66,1632	0/0:29,0:29:81.02:0,81,2013	0/0:45,0:45:99:0,118,2873	1/1:18,0:18:24.03:657,24,0	0/0:14,0:14:38.96:0,39,667	0/0:41,0:41:99:0,108,2897	0/0:6,0:6:15.05:0,15,482
chr10	2654697	.	T	TC	7771.21	PASS	AB=0.529;AC=15;AF=0.268;AN=56;BaseQRankSum=4.556;DP=630;FS=0.000;HRun=0;HaplotypeScore=67.8825;InbreedingCoeff=0.9187;MQ=83.23;MQ0=0;MQRankSum=-0.397;QD=41.56;ReadPosRankSum=1.608;VQSLOD=5.4688;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,34:34:93.32:1483,93,0	0/0:18,0:18:54.16:0,54,722	0/0:27,0:27:74.55:0,75,1035	0/0:14,0:14:39.13:0,39,539	0/0:34,0:34:99:0,102,1364	0/0:33,0:33:99:0,99,1345	0/0:20,0:20:60.19:0,60,822	1/1:0,35:35:99:1506,99,0	0/0:37,0:37:99:0,108,1476	0/0:34,0:34:99:0,99,1356	0/0:23,0:23:69.20:0,69,944	0/0:14,0:14:42.14:0,42,586	0/0:15,0:15:45.15:0,45,629	0/0:13,0:13:39.13:0,39,545	1/1:0,21:21:60.14:928,60,0	0/0:15,0:15:45.13:0,45,598	1/1:2,16:18:39.13:623,39,0	0/0:8,0:8:24.08:0,24,335	0/0:15,0:15:45.11:0,45,590	0/0:33,0:33:96.31:0,96,1323	0/0:26,0:26:75.22:0,75,1009	0/0:26,0:26:78.21:0,78,1067	0/0:23,0:23:69.20:0,69,925	0/0:15,0:15:45.15:0,45,628	1/1:0,25:25:66.23:1055,66,0	0/1:3,24:27:8.86:1028,0,9	1/1:0,20:20:51.17:813,51,0	1/1:0,7:7:21.07:335,21,0
chr10	2655481	.	A	AT	686.90	PASS	AB=0.729;AC=4;AF=0.071;AN=56;BaseQRankSum=-7.023;DP=459;FS=8.092;HRun=10;HaplotypeScore=53.9549;InbreedingCoeff=0.4539;MQ=77.54;MQ0=0;MQRankSum=1.020;QD=14.31;ReadPosRankSum=-3.594;VQSLOD=2.2948;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:68.91:0,69,566	0/1:5,1:6:14:14,0,105	0/0:19,0:18:34.75:0,35,260	0/0:11,0:9:25.19:0,25,156	0/0:14,0:14:35.96:0,36,295	0/0:17,1:18:15.96:0,16,337	0/0:12,1:13:0.97:0,1,214	1/1:6,18:27:59.69:586,60,0	0/0:20,1:21:24.93:0,25,411	0/0:20,2:22:8.49:0,8,414	0/0:11,1:12:3.98:0,4,239	0/0:10,0:11:1.79:0,2,151	0/0:6,0:6:17.98:0,18,148	0/0:18,0:18:41.90:0,42,341	0/0:21,0:21:62.92:0,63,517	0/0:16,0:18:49.02:0,49,381	0/1:5,10:15:0.58:200,0,1	0/0:7,0:7:17.98:0,18,148	0/0:15,0:15:35.95:0,36,296	0/0:23,0:24:48.53:0,49,478	0/0:27,0:27:65.91:0,66,542	0/0:11,0:11:29.96:0,30,246	0/0:17,0:17:47.93:0,48,391	0/0:18,0:18:47.92:0,48,393	0/0:12,0:12:23.97:0,24,197	0/0:18,0:18:50.93:0,51,416	0/0:18,0:18:47.91:0,48,394	0/0:10,0:10:26.97:0,27,222
chr10	2655824	.	AGAGG	A	810.98	PASS	AB=0.783;AC=14;AF=0.250;AN=56;BaseQRankSum=10.079;DP=507;FS=1.832;HRun=0;HaplotypeScore=92.6927;InbreedingCoeff=0.6663;MQ=66.41;MQ0=28;MQRankSum=-2.506;QD=5.44;ReadPosRankSum=-1.223;VQSLOD=1.5375;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:31:12.23:12,0,14	0/0:5,0:5:11.99:0,12,103	0/0:22,0:14:29.10:0,29,302	0/0:41,0:15:12.80:0,13,153	0/0:23,0:20:19.60:0,20,283	0/0:23,0:22:48.27:0,48,425	0/0:17,0:16:25.55:0,26,252	1/1:24,0:23:46.23:334,46,0	0/0:11,0:11:19.14:0,19,177	0/0:22,0:21:47.70:0,48,396	0/0:16,0:15:33.47:0,33,291	0/0:13,0:13:35.61:0,36,305	0/0:15,0:13:35.78:0,36,280	0/0:19,0:19:39.80:0,40,337	1/1:15,0:15:1.99:6,2,0	0/0:11,0:11:30.35:0,30,248	0/1:19,0:18:5.35:204,0,5	0/0:10,0:9:4.91:0,5,161	0/0:24,0:23:54.57:0,55,436	0/0:18,0:17:32.98:0,33,283	0/0:26,0:23:51.85:0,52,454	0/1:2,15:15:0.09:1,0,0	0/0:12,0:12:23.11:0,23,198	0/0:30,0:28:28:0,28,587	1/1:7,0:7:8.97:70,9,0	1/1:16,0:15:18.62:220,19,0	0/1:4,8:12:2.14:39,0,2	1/1:6,0:6:13.94:92,14,0
chr10	2655828	.	G	GGAGGGA	3161.23	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=4.588;DP=508;FS=3.262;HRun=0;HaplotypeScore=115.5414;InbreedingCoeff=0.9245;MQ=71.25;MQ0=22;MQRankSum=-4.680;QD=24.32;ReadPosRankSum=-2.221;VQSLOD=2.7743;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:8,22:33:12:266,12,0	0/0:5,0:5:11.92:0,12,272	0/0:25,0:17:39.52:0,40,694	0/0:43,0:17:27.55:0,28,410	0/0:26,0:23:44.53:0,45,893	0/0:21,0:21:48.63:0,49,1036	0/0:16,0:15:32.70:0,33,706	1/1:26,0:25:59.80:976,60,0	0/0:12,0:12:19.84:0,20,492	0/0:22,0:21:48.13:0,48,957	0/0:16,0:16:35.70:0,36,754	0/0:12,0:12:36.10:0,36,700	0/0:12,0:11:33.07:0,33,664	0/0:18,0:18:43.95:0,44,852	1/1:14,0:14:6.49:110,6,0	0/0:10,0:10:29.82:0,30,571	1/1:17,0:17:33.17:738,33,0	0/0:10,0:9:24.55:0,25,515	0/0:27,0:26:56.95:0,57,1061	0/0:16,0:16:35.77:0,36,746	0/0:30,0:27:59.17:0,59,1114	0/0:16,0:15:1.25:0,1,4	0/0:13,0:13:30.08:0,30,551	0/0:28,0:27:53.35:0,53,1361	1/1:8,0:8:12.03:216,12,0	1/1:14,0:13:29.46:593,29,0	1/1:9,0:9:8.81:177,9,0	1/1:6,0:6:15.05:282,15,0
chr10	2656070	.	GGACAGACAGACAGACAAACAGACA	G	3778.07	PASS	AB=0.929;AC=13;AF=0.232;AN=56;BaseQRankSum=7.735;DP=681;FS=1.844;HRun=0;HaplotypeScore=388.3143;InbreedingCoeff=0.6814;MQ=67.56;MQ0=7;MQRankSum=-3.651;QD=27.99;ReadPosRankSum=-0.854;VQSLOD=1.0242;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:14:14.68:199,15,0	0/0:9,0:9:27.09:0,27,2206	0/0:31,0:18:24.52:0,25,437	0/0:24,0:15:6.92:0,7,191	0/0:25,0:25:63.16:0,63,4456	0/0:30,0:30:72.21:0,72,6166	0/0:34,0:34:60.17:0,60,4643	0/1:20,0:18:99:127,0,139	0/0:18,0:18:48.05:0,48,2881	0/0:32,0:32:81.13:0,81,6396	0/0:17,0:17:41.92:0,42,2572	0/0:24,0:24:54.15:0,54,4213	0/0:21,0:21:51.03:0,51,3355	0/0:31,0:31:66.20:0,66,4773	1/1:7,15:22:24.08:1060,24,0	0/0:22,0:22:51.14:0,51,3081	0/1:26,0:27:99:226,0,249	0/0:22,0:22:51.10:0,51,2973	0/0:14,0:14:24.04:0,24,1471	0/0:20,0:20:54.17:0,54,4217	0/0:84,0:84:99:0,208,15443	0/0:24,0:24:57.12:0,57,4002	0/0:20,0:20:45.13:0,45,3172	0/0:44,0:44:99:0,117,10278	1/1:8,1:9:18.01:334,18,0	0/1:11,3:14:6.95:646,0,7	1/1:3,17:20:14.96:951,15,0	1/1:8,1:9:8.97:234,9,0
chr10	2656150	.	A	ACATC	4594.55	PASS	AB=0.649;AC=15;AF=0.268;AN=56;BaseQRankSum=8.529;DP=648;FS=6.578;HRun=0;HaplotypeScore=156.1324;InbreedingCoeff=0.8895;MQ=57.68;MQ0=19;MQRankSum=-10.982;QD=32.59;ReadPosRankSum=-3.126;VQSLOD=3.8372;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:11,13:24:21.73:84,0,22	0/0:9,0:9:24.04:0,24,376	0/0:37,0:11:30.01:0,30,347	0/0:63,0:24:38.82:0,39,461	0/0:20,0:20:53.98:0,54,821	0/0:25,0:25:69.19:0,69,1154	0/0:28,0:28:75.15:0,75,1317	1/1:9,19:27:69.19:1080,69,0	0/0:17,0:17:51.08:0,51,843	0/0:26,0:26:66.58:0,67,1024	0/0:17,0:17:41.49:0,41,720	0/0:23,0:23:63.43:0,63,969	0/0:24,0:24:63.17:0,63,1084	0/0:23,0:23:63.12:0,63,1141	1/1:14,5:18:43.84:530,44,0	0/0:17,0:17:45.15:0,45,838	1/1:18,4:21:45.85:631,46,0	0/0:15,0:15:40.19:0,40,699	0/0:13,0:13:38.46:0,38,543	0/0:16,0:16:42.13:0,42,748	0/0:59,0:59:99:0,157,2611	0/0:19,0:18:51.17:0,51,932	0/0:17,0:16:39.09:0,39,677	0/0:39,0:39:99:0,99,1681	1/1:6,3:9:23.04:285,23,0	1/1:11,1:12:39.07:615,39,0	1/1:16,7:23:66.16:1254,66,0	1/1:3,0:3:6.02:115,6,0
chr10	2656160	.	A	ACG	704.20	PASS	AB=0.922;AC=9;AF=0.161;AN=56;BaseQRankSum=7.480;DP=669;FS=2.816;HRun=0;HaplotypeScore=141.7232;InbreedingCoeff=0.2846;MQ=52.44;MQ0=24;MQRankSum=-6.269;QD=5.38;ReadPosRankSum=2.212;VQSLOD=3.2092;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:8.85:0,9,67	0/0:7,0:7:14.87:0,15,130	0/0:30,0:6:12.01:0,12,111	0/0:54,0:18:28.29:0,28,315	0/0:25,0:25:53.87:0,54,548	0/0:25,0:25:27.84:0,28,635	0/0:30,0:30:77.97:0,78,785	0/1:25,0:25:29.09:29,0,181	0/0:20,0:19:50.41:0,50,531	0/0:26,0:25:64.20:0,64,635	0/0:19,0:19:35.26:0,35,363	0/0:21,0:21:40.23:0,40,452	0/0:20,0:20:53.67:0,54,557	0/0:25,0:25:66.03:0,66,764	0/1:24,1:24:4.67:111,0,5	0/0:18,0:18:48.06:0,48,557	0/1:12,8:21:19.84:433,0,20	0/0:21,0:21:52.72:0,53,500	0/0:15,0:14:33.66:0,34,300	0/0:19,0:19:52.15:0,52,522	0/0:59,0:58:99:0,131,1203	0/0:21,0:18:48:0,48,513	0/0:19,0:18:32.97:0,33,370	0/0:38,0:38:95.60:0,96,1031	1/1:10,0:10:5.34:22,5,0	0/1:21,0:18:21.54:22,0,106	0/1:25,0:25:86.99:184,0,87	1/1:2,0:2:5.05:42,5,0
chr10	2656510	.	TGATTGCCCTCCA	T	13624.41	PASS	AB=0.542;AC=15;AF=0.268;AN=56;BaseQRankSum=16.065;DP=663;FS=6.306;HRun=0;HaplotypeScore=231.4615;InbreedingCoeff=0.9024;MQ=90.42;MQ0=0;MQRankSum=-15.523;QD=74.45;ReadPosRankSum=2.406;VQSLOD=3.7803;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,16:22:35.99:1057,36,0	0/0:11,0:11:30.10:0,30,1811	0/0:34,0:34:87.30:0,87,4289	0/0:24,0:24:69.21:0,69,3137	0/0:20,0:20:54.19:0,54,3087	0/0:30,0:30:78.27:0,78,4267	0/0:23,0:23:63.22:0,63,3563	1/1:6,17:23:51.16:1627,51,0	0/0:21,0:21:63.22:0,63,3598	0/0:22,0:22:60.21:0,60,3422	0/0:24,0:24:66.23:0,66,3774	0/0:25,0:25:75.24:0,75,4168	0/0:34,0:34:90.31:0,90,5160	0/0:23,0:23:66.23:0,66,3925	1/1:4,24:28:72.25:2547,72,0	0/0:19,0:19:51.18:0,51,2920	1/1:5,12:17:21.07:775,21,0	0/0:11,0:11:30.10:0,30,1578	0/0:26,0:26:60.21:0,60,3390	0/0:32,0:32:90.30:0,90,5094	0/0:33,0:33:93.32:0,93,5669	0/0:26,0:25:75.26:0,75,4209	0/0:26,0:26:75.24:0,75,4337	0/0:16,0:16:45.15:0,45,2687	1/1:2,15:17:42.14:1475,42,0	0/1:5,27:32:41.41:2735,0,41	1/1:6,33:39:81.28:2964,81,0	1/1:1,4:5:12.04:444,12,0
chr10	2657579	.	TCA	T	349.14	PASS	AB=0.940;AC=16;AF=0.296;AN=54;BaseQRankSum=4.966;DP=609;FS=6.730;HRun=0;HaplotypeScore=99.6066;InbreedingCoeff=-0.2268;MQ=74.07;MQ0=29;MQRankSum=-3.208;QD=1.18;ReadPosRankSum=2.086;VQSLOD=1.0269;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:26:0:0,0,0	0/0:13,0:13:6.49:0,6,87	./.	0/0:68,0:35:0:0,0,0	0/1:11,1:12:23.51:24,0,58	0/1:18,2:22:31.98:32,0,309	0/1:23,0:24:4.67:5,0,303	0/0:10,0:10:5.98:0,6,56	0/0:14,0:14:21.05:0,21,274	0/1:16,2:18:14.71:15,0,106	0/0:13,0:13:9.02:0,9,116	0/1:25,1:25:40.63:41,0,217	0/1:13,1:14:14.44:14,0,202	0/0:15,0:15:4.12:0,4,195	0/0:25,0:25:8.95:0,9,68	0/1:18,1:20:28.59:29,0,160	1/1:17,0:25:7.47:49,7,0	0/0:9,0:9:6.02:0,6,89	0/1:12,3:15:55.13:55,0,174	0/0:16,0:16:21.01:0,21,257	0/1:30,3:33:82.92:83,0,388	0/0:20,0:22:21.06:0,21,292	0/1:16,2:19:11.45:11,0,223	0/0:33,1:35:7.53:0,8,663	0/0:10,0:9:6.01:0,6,59	0/1:11,0:11:11.50:84,0,11	0/1:17,0:17:45.74:46,0,47	0/1:14,0:14:5.33:5,0,51
chr10	2657623	.	A	ACACACC	695.10	PASS	AB=0.975;AC=8;AF=0.143;AN=56;BaseQRankSum=8.861;DP=677;FS=7.773;HRun=0;HaplotypeScore=171.3050;InbreedingCoeff=0.4049;MQ=55.59;MQ0=31;MQRankSum=-3.615;QD=6.68;ReadPosRankSum=-4.147;VQSLOD=0.8971;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:23:47.27:321,47,0	0/0:10,0:10:19.90:0,20,180	0/0:57,0:17:24.21:0,24,312	0/0:74,0:24:47.48:0,47,452	0/0:17,0:15:35.96:0,36,338	0/0:23,0:22:47.87:0,48,660	0/0:26,0:27:67.80:0,68,737	0/0:30,0:28:75.88:0,76,590	0/0:20,0:20:53.61:0,54,672	0/0:23,0:20:56.91:0,57,645	0/0:11,0:10:15.02:0,15,262	0/0:20,0:18:47.10:0,47,549	0/0:20,0:20:47.58:0,48,589	0/0:22,0:22:19:0,19,492	1/1:8,13:23:14.86:219,15,0	0/0:19,0:18:41.68:0,42,590	0/0:22,0:24:19.35:0,19,340	0/0:11,0:11:23.45:0,23,279	0/0:21,0:20:43.71:0,44,585	0/0:23,0:23:43.88:0,44,546	0/0:50,0:50:99:0,118,1312	0/0:22,0:22:53.71:0,54,599	0/0:12,0:12:26.54:0,27,389	0/0:35,0:34:80.97:0,81,1481	0/1:8,0:8:31.32:54,0,31	0/1:17,0:17:52.16:143,0,52	0/1:19,0:19:19.41:19,0,84	0/1:13,0:12:79.12:86,0,79
chr10	2657650	.	GACACAC	G	2683.05	PASS	AB=0.691;AC=12;AF=0.214;AN=56;BaseQRankSum=6.242;DP=620;FS=22.029;HRun=0;HaplotypeScore=141.6455;InbreedingCoeff=0.7425;MQ=55.95;MQ0=21;MQRankSum=-0.476;QD=21.81;ReadPosRankSum=1.514;VQSLOD=1.9531;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:20,5:22:35.81:643,36,0	0/0:8,0:8:21.07:0,21,553	0/0:56,0:23:43.77:0,44,1073	0/0:69,0:23:44.98:0,45,960	0/0:17,0:15:39.13:0,39,1027	0/0:20,0:19:37.26:0,37,531	0/0:28,0:27:63.19:0,63,1585	0/1:7,11:17:8.89:514,0,9	0/0:21,0:21:52.72:0,53,1228	0/0:20,0:19:54.17:0,54,1403	0/0:7,0:7:12.04:0,12,304	0/0:22,0:21:38.68:0,39,849	0/0:21,0:20:45.14:0,45,1051	0/0:23,0:22:48.89:0,49,1226	0/1:11,3:15:10.61:65,0,11	0/0:21,0:19:30.10:0,30,770	1/1:18,2:19:26.50:620,26,0	0/0:12,0:12:28.30:0,28,601	0/0:17,0:17:45.14:0,45,986	0/0:20,0:20:45.13:0,45,977	0/0:40,0:40:90.28:0,90,2280	0/0:19,0:19:48.16:0,48,1152	0/0:15,0:15:36.10:0,36,795	0/0:33,0:33:81.26:0,81,2096	0/0:2,6:7:0:0,0,0	1/1:13,6:17:42.34:792,42,0	1/1:1,13:15:5.29:73,5,0	1/1:2,8:10:9.02:146,9,0
chr10	2657658	.	CAG	C	119.55	PASS	AB=0.995;AC=12;AF=0.240;AN=50;BaseQRankSum=0.909;DP=625;FS=14.147;HRun=0;HaplotypeScore=111.1431;InbreedingCoeff=0.2562;MQ=53.06;MQ0=22;MQRankSum=1.019;QD=0.61;ReadPosRankSum=0.238;VQSLOD=1.5212;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:31,0:28:2.38:2,0,90	0/0:8,0:8:8.97:0,9,86	./.	./.	0/0:18,0:16:6.02:0,6,85	0/0:20,0:19:15.01:0,15,169	0/0:25,0:27:9:0,9,107	0/0:22,0:20:0:0,0,0	0/0:17,0:18:8.98:0,9,73	0/1:25,0:24:24.52:44,0,25	./.	1/1:13,7:21:8.86:78,9,0	1/1:17,5:21:3.01:32,3,0	1/1:23,0:23:10.10:64,10,0	0/1:19,0:18:5.23:5,0,28	0/0:13,0:21:3:0,3,26	0/0:21,0:20:15.37:0,15,134	0/1:12,0:12:11.35:11,0,21	0/0:21,0:20:14.80:0,15,104	0/0:19,0:19:6:0,6,64	0/0:41,0:41:19.64:0,20,167	0/0:22,0:22:8.20:0,8,49	0/0:16,0:16:6.01:0,6,67	0/1:32,1:33:11.58:12,0,174	0/1:9,0:8:0:0,0,0	0/0:21,0:19:3.90:0,4,41	0/0:16,0:16:0:0,0,1	0/0:11,0:11:0:0,0,0
chr10	2658000	.	A	AT	5418.92	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-11.935;DP=585;FS=0.347;HRun=7;HaplotypeScore=54.8398;InbreedingCoeff=0.9986;MQ=86.20;MQ0=0;MQRankSum=-0.933;QD=29.45;ReadPosRankSum=-0.200;VQSLOD=5.0821;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,28:29:76.48:909,76,0	0/0:14,0:14:39.06:0,39,377	0/0:24,0:25:61.91:0,62,543	0/0:19,0:19:22.86:0,23,354	0/0:30,0:30:84.13:0,84,811	0/0:29,0:29:75.11:0,75,724	0/0:29,0:29:84.07:0,84,789	1/1:5,26:31:80.99:873,81,0	0/0:9,0:9:27.04:0,27,260	0/0:30,0:30:78.06:0,78,735	0/0:20,0:20:56.99:0,57,537	0/0:17,0:17:45.07:0,45,435	0/0:18,0:18:48.06:0,48,457	0/0:17,0:17:51.07:0,51,487	1/1:3,16:19:39.12:471,39,0	0/0:13,0:13:39.06:0,39,377	1/1:4,17:21:51.16:616,51,0	0/0:15,0:15:33.02:0,33,311	0/0:14,0:14:39.06:0,39,377	0/0:30,0:30:72.10:0,72,695	0/0:8,0:8:21.03:0,21,203	0/0:29,0:29:81.12:0,81,778	0/0:20,0:20:51.07:0,51,488	0/0:15,0:15:42.07:0,42,406	1/1:2,21:23:60.18:725,60,0	1/1:2,25:27:78.11:919,78,0	1/1:2,17:19:36.11:435,36,0	1/1:0,14:14:39.12:471,39,0
chr10	2659378	.	A	AATGACTTT	11290.01	PASS	AB=0.605;AC=14;AF=0.250;AN=56;BaseQRankSum=-5.126;DP=678;FS=3.677;HRun=0;HaplotypeScore=134.8491;InbreedingCoeff=0.7690;MQ=52.55;MQ0=12;MQRankSum=-14.897;QD=70.56;ReadPosRankSum=-3.701;VQSLOD=3.7109;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:4,8:13:52.67:835,0,53	0/0:7,0:7:21.07:0,21,588	0/0:27,0:9:27.09:0,27,748	0/0:22,0:10:29.31:0,29,750	0/0:30,0:30:81.28:0,81,2159	0/0:29,0:29:78.27:0,78,2110	0/0:16,0:16:30.10:0,30,779	1/1:8,1:1:3.01:42,3,0	0/0:23,0:23:66.23:0,66,1797	0/0:38,0:38:99:0,108,2937	0/0:27,0:27:66.23:0,66,1785	0/0:26,0:26:69.24:0,69,1893	0/0:27,0:27:75.23:0,75,1996	0/0:27,0:27:63.22:0,63,1669	1/1:10,18:27:51.17:2034,51,0	0/0:24,0:24:69.23:0,69,1810	1/1:3,6:8:15.05:658,15,0	0/0:21,0:21:39.12:0,39,993	0/0:33,0:27:66.23:0,66,1767	0/0:45,0:45:99:0,117,3271	0/0:18,0:18:48.16:0,48,1301	0/0:20,0:20:48.16:0,48,1341	0/0:31,0:31:81.23:0,81,2114	0/0:27,0:25:66.23:0,66,1748	1/1:12,15:28:66.23:2534,66,0	0/1:10,15:25:98.74:2438,0,99	1/1:7,24:30:48.16:1921,48,0	1/1:5,6:12:21.07:828,21,0
chr10	2659823	.	A	AC	2120.74	PASS	AC=14;AF=0.259;AN=54;BaseQRankSum=-0.351;DP=501;FS=0.000;HRun=4;HaplotypeScore=56.4678;InbreedingCoeff=0.9602;MQ=59.15;MQ0=10;MQRankSum=-4.871;QD=20.01;ReadPosRankSum=3.119;VQSLOD=2.8144;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,10:17:21.07:286,21,0	0/0:8,0:8:24.07:0,24,272	0/0:20,0:16:39.07:0,39,427	0/0:23,0:20:44.28:0,44,511	0/0:20,0:19:51.15:0,51,578	0/0:16,0:16:39.11:0,39,442	0/0:21,0:21:39.11:0,39,438	./.	0/0:17,0:17:33.09:0,33,374	0/0:20,0:20:48.13:0,48,545	0/0:14,0:14:36.10:0,36,408	0/0:23,0:23:54.15:0,54,611	0/0:15,0:14:29.99:0,30,340	0/0:13,0:13:24.06:0,24,271	1/1:1,16:15:26.99:368,27,0	0/0:21,0:21:57.16:0,57,646	1/1:4,10:9:12.04:164,12,0	0/0:11,0:9:18.05:0,18,204	0/0:19,0:16:39.07:0,39,427	0/0:22,0:22:48.13:0,48,543	0/0:36,0:36:96.27:0,96,1089	0/0:15,0:15:39.11:0,39,442	0/0:17,0:17:48.10:0,48,530	0/0:39,0:38:90.25:0,90,1020	1/1:0,11:10:6.02:82,6,0	1/1:1,15:14:42.10:552,42,0	1/1:0,24:20:54.18:733,54,0	1/1:0,4:4:9.03:123,9,0
chr10	2659914	.	A	AG	347.27	PASS	AC=6;AF=0.115;AN=52;BaseQRankSum=4.809;DP=449;FS=5.540;HRun=2;HaplotypeScore=46.3767;InbreedingCoeff=0.8547;MQ=42.74;MQ0=43;MQRankSum=-4.668;QD=9.39;ReadPosRankSum=1.178;VQSLOD=1.3275;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:6:6.02:0,6,74	0/0:6,0:6:18.04:0,18,210	./.	./.	0/0:12,0:11:15.05:0,15,185	0/0:16,0:14:21.07:0,21,260	0/0:21,0:17:18.06:0,18,219	0/0:27,0:4:12.04:0,12,149	0/0:20,0:19:36.11:0,36,446	0/0:21,0:20:57.18:0,57,706	0/0:10,0:10:15.05:0,15,186	0/0:17,1:17:24.08:0,24,298	0/0:24,0:21:32.72:0,33,408	0/0:21,0:19:32.94:0,33,409	0/0:16,0:13:30.09:0,30,371	0/0:15,2:17:39.12:0,39,483	0/0:27,0:12:9.03:0,9,111	0/0:15,1:11:15.05:0,15,186	0/0:15,0:8:24.08:0,24,298	0/0:17,0:17:48.15:0,48,595	0/0:27,0:19:30.09:0,30,372	0/0:11,0:10:12.03:0,12,149	0/0:14,0:13:21.06:0,21,260	0/0:30,0:24:42.07:0,42,490	0/0:11,1:11:24.07:0,24,293	1/1:2,10:6:12.04:173,12,0	1/1:0,17:10:12.04:173,12,0	1/1:1,7:5:9.03:129,9,0
chr10	2660081	.	GGA	G	419.43	PASS	AC=4;AF=0.074;AN=54;BaseQRankSum=5.302;DP=295;FS=2.584;HRun=0;HaplotypeScore=36.3392;InbreedingCoeff=0.6931;MQ=44.23;MQ0=47;MQRankSum=-3.303;QD=24.67;ReadPosRankSum=-0.204;VQSLOD=3.4125;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:15:33.07:0,33,551	0/0:6,0:4:12.03:0,12,189	0/0:1,0:1:3.01:0,3,40	./.	0/0:10,0:6:12.03:0,12,189	0/0:5,0:4:9.02:0,9,135	0/0:7,0:5:12.03:0,12,181	0/0:16,0:8:23.98:0,24,336	0/0:13,0:11:17.98:0,18,279	0/0:12,0:12:36.12:0,36,658	0/0:5,0:3:9.03:0,9,165	0/0:9,0:9:12.03:0,12,190	0/0:15,0:13:17.94:0,18,296	0/0:12,0:11:21.07:0,21,384	1/1:1,6:6:12.04:178,12,0	0/0:11,0:10:18.05:0,18,299	0/0:15,0:13:27.07:0,27,460	0/0:15,0:12:6.02:0,6,110	0/0:6,0:3:9.03:0,9,161	0/0:13,0:12:26.39:0,26,462	0/0:18,0:9:18.05:0,18,299	0/0:14,0:11:24.07:0,24,408	0/0:13,0:12:30.10:0,30,547	0/0:14,0:9:12.04:0,12,207	1/1:0,10:9:24.08:356,24,0	0/0:7,0:4:12.04:0,12,219	0/0:14,0:11:27.08:0,27,462	0/0:5,0:4:9.03:0,9,164
chr10	2660195	.	G	GA	865.17	PASS	AB=0.917;AC=5;AF=0.089;AN=56;BaseQRankSum=-8.506;DP=450;FS=10.231;HRun=10;HaplotypeScore=55.6128;InbreedingCoeff=0.6746;MQ=58.08;MQ0=4;MQRankSum=-0.438;QD=15.45;ReadPosRankSum=-1.696;VQSLOD=2.6150;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:41.57:0,42,454	0/0:8,0:9:23:0,23,178	0/0:8,0:6:14.97:0,15,121	0/0:6,0:6:11.96:0,12,94	0/0:20,0:20:53.92:0,54,443	0/0:12,0:12:29.95:0,30,246	0/0:8,0:8:20.93:0,21,165	1/1:9,16:25:4.84:463,5,0	0/0:16,0:16:44.95:0,45,369	0/0:17,0:17:29.95:0,30,246	0/0:13,0:12:29.96:0,30,246	0/0:12,0:12:29.97:0,30,246	0/0:17,0:17:35.90:0,36,290	0/0:12,0:12:26.94:0,27,218	0/0:14,0:14:38.95:0,39,320	0/0:19,0:19:47.84:0,48,394	1/1:3,17:20:48.12:512,48,0	0/0:18,0:18:41.91:0,42,339	0/0:20,0:17:32.93:0,33,271	0/0:14,0:14:41.95:0,42,345	0/1:9,1:11:2.96:3,0,171	0/0:10,0:12:22.05:0,22,160	0/0:21,2:24:0.97:0,1,410	0/0:9,0:9:23.97:0,24,197	0/0:22,0:22:53.94:0,54,443	0/0:30,0:30:80.88:0,81,663	0/0:21,0:22:61.97:0,62,498	0/0:12,0:12:29.96:0,30,246
chr10	2661093	.	ATG	A	273.78	PASS	AB=0.925;AC=17;AF=0.327;AN=52;BaseQRankSum=5.787;DP=546;FS=5.184;HRun=0;HaplotypeScore=78.3117;InbreedingCoeff=0.2608;MQ=74.06;MQ0=8;MQRankSum=-3.313;QD=1.49;ReadPosRankSum=3.051;VQSLOD=1.1019;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:25:2.82:14,3,0	0/0:12,0:12:9:0,9,109	./.	./.	0/1:22,0:22:2.33:2,0,200	0/0:13,0:13:12.02:0,12,144	0/0:22,0:22:14.58:0,15,202	0/0:32,0:32:3.01:0,3,37	0/1:17,1:18:14.26:14,0,202	0/0:23,0:23:9.03:0,9,133	0/0:13,0:13:5.90:0,6,81	1/1:13,5:18:6.01:65,6,0	0/0:16,0:15:3.01:0,3,44	0/0:15,0:16:6.01:0,6,70	1/1:12,0:17:11.36:56,11,0	0/0:22,0:21:11.98:0,12,175	0/1:15,2:17:10.52:83,0,11	0/1:9,1:10:23.32:23,0,45	0/0:21,0:21:15.03:0,15,181	0/0:20,0:19:6:0,6,67	0/0:48,0:49:3.69:0,4,172	0/0:15,0:14:5.99:0,6,48	0/0:12,0:12:3.01:0,3,42	0/0:14,1:15:0.76:0,1,372	1/1:6,0:15:11.36:56,11,0	0/1:12,2:14:12.92:48,0,13	1/1:13,2:15:3.01:33,3,0	1/1:8,5:13:3.01:32,3,0
chr10	2661882	.	T	TTATC	907.75	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=-2.868;DP=748;FS=0.000;HRun=0;HaplotypeScore=184.5529;InbreedingCoeff=0.5325;MQ=71.26;MQ0=4;MQRankSum=-3.418;QD=6.39;ReadPosRankSum=-7.645;VQSLOD=-0.1008;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:35.88:0,36,352	0/0:11,0:11:18.02:0,18,192	0/0:24,0:19:17.82:0,18,138	0/0:33,0:31:26.85:0,27,240	0/0:25,0:25:41.87:0,42,383	0/0:28,0:28:42.05:0,42,437	0/0:20,0:20:23.98:0,24,211	1/1:45,0:45:71.85:611,72,0	0/0:27,0:27:24.04:0,24,255	0/0:43,0:43:94.66:0,95,1017	0/0:21,0:21:48.04:0,48,492	0/0:29,0:29:29.99:0,30,287	0/0:25,0:25:45.01:0,45,441	0/0:27,0:27:29.98:0,30,319	0/0:32,0:32:16.59:0,17,404	0/0:20,0:20:41.98:0,42,418	1/1:8,24:32:20.88:397,21,0	0/0:13,0:13:20.90:0,21,190	0/0:23,0:22:39.01:0,39,399	0/0:32,0:32:51.02:0,51,497	0/0:37,0:37:69.11:0,69,746	0/0:31,0:31:50.92:0,51,487	0/0:29,0:29:45.01:0,45,472	0/0:29,0:29:44.78:0,45,461	0/0:21,0:21:27.04:0,27,331	0/1:27,0:29:18.88:19,0,366	0/1:22,0:24:14.46:14,0,116	0/1:10,0:10:4.64:5,0,32
chr10	2661920	.	G	GTCTATCTATCTA	3454.17	PASS	AB=0.911;AC=9;AF=0.161;AN=56;BaseQRankSum=6.690;DP=747;FS=2.630;HRun=0;HaplotypeScore=260.5115;InbreedingCoeff=0.2995;MQ=57.78;MQ0=9;MQRankSum=-6.845;QD=20.93;ReadPosRankSum=-1.796;VQSLOD=2.6053;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:28:39.96:40,0,361	0/0:10,0:10:15.05:0,15,432	0/1:14,0:8:33.27:33,0,243	0/0:20,0:13:20.45:0,20,395	0/0:22,0:22:39:0,39,894	0/0:33,0:33:54.14:0,54,1191	0/1:19,0:19:47.66:48,0,291	0/0:56,0:56:99:0,147,3165	0/0:26,0:26:30.04:0,30,595	0/0:42,0:42:99:0,110,2824	0/0:23,0:23:36.11:0,36,925	0/0:25,0:25:21.06:0,21,481	0/0:27,0:27:42.10:0,42,941	0/0:29,0:29:39.10:0,39,912	0/0:28,0:28:26.10:0,26,713	0/0:21,0:21:33:0,33,845	0/1:28,0:26:63.37:63,0,508	0/0:16,0:16:20.45:0,20,513	0/0:24,0:23:63.18:0,63,1489	0/0:28,0:28:48.11:0,48,994	0/0:35,0:35:63.11:0,63,1545	0/0:33,0:33:57.17:0,57,1384	0/0:27,0:27:38.67:0,39,990	0/0:27,0:27:33.04:0,33,846	0/0:30,0:30:7.14:0,7,537	0/1:8,25:39:27.72:2312,0,28	1/1:5,18:29:11.86:261,12,0	1/1:2,6:7:12.04:697,12,0
chr10	2661936	.	A	ATCTATCTATCTATCTG	3403.81	PASS	AB=1.000;AC=6;AF=0.111;AN=54;BaseQRankSum=7.191;DP=793;FS=5.393;HRun=0;HaplotypeScore=318.3860;InbreedingCoeff=0.2145;MQ=61.68;MQ0=6;MQRankSum=-7.697;QD=25.03;ReadPosRankSum=2.667;VQSLOD=1.3541;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:30:99:106,0,148	0/0:10,0:10:18.04:0,18,642	0/0:30,0:24:32.09:0,32,1319	0/0:22,0:16:42.02:0,42,1241	0/0:34,0:34:65.69:0,66,1829	0/0:34,0:34:60.21:0,60,2306	0/0:22,0:22:27.08:0,27,804	0/0:45,0:45:71.22:0,71,2295	0/0:27,0:27:33.11:0,33,1197	0/0:43,0:43:99:0,102,4021	0/0:26,0:26:48.15:0,48,1537	0/0:27,0:27:27.09:0,27,869	0/0:25,0:25:41.59:0,42,1444	0/0:30,0:30:45.12:0,45,1647	1/1:13,0:32:9.03:690,9,0	0/0:22,0:22:38.71:0,39,1427	0/0:23,0:21:30.10:0,30,906	0/0:20,0:20:24.08:0,24,929	0/0:29,0:29:72:0,72,2260	0/0:27,0:27:51.17:0,51,1755	0/0:43,0:43:90.27:0,90,3105	0/0:33,0:33:54.17:0,54,1896	0/0:24,0:24:33.58:0,34,1213	0/0:26,0:26:39.13:0,39,1477	./.	0/1:35,0:35:99:1896,0,175	0/1:29,0:29:70.36:116,0,70	0/1:10,0:10:47.38:596,0,47
chr10	2662698	.	G	GTCCATCCA	3210.44	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=4.197;DP=643;FS=11.154;HRun=0;HaplotypeScore=166.2012;InbreedingCoeff=0.8261;MQ=58.45;MQ0=6;MQRankSum=-7.676;QD=23.10;ReadPosRankSum=-4.251;VQSLOD=1.4438;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:22,1:23:15.05:320,15,0	0/0:12,0:12:21.07:0,21,493	0/0:37,0:22:11.97:0,12,228	0/0:32,0:14:8.37:0,8,152	0/0:26,0:26:39.13:0,39,903	0/0:36,0:36:66.19:0,66,1480	0/0:16,0:16:21.07:0,21,493	1/1:37,0:36:19.85:405,20,0	0/0:21,0:21:30.10:0,30,697	0/0:23,0:23:51.17:0,51,1228	0/0:16,0:16:27.09:0,27,676	0/0:18,0:18:48.16:0,48,1170	0/0:26,0:27:51.15:0,51,1178	0/0:9,0:9:9.03:0,9,194	1/1:21,3:24:33.57:1047,34,0	0/0:20,0:20:39.13:0,39,888	1/1:7,0:14:20.95:171,21,0	0/1:13,0:13:60.16:60,0,427	0/0:10,0:8:6.02:0,6,150	0/0:29,0:29:39.12:0,39,875	0/0:24,0:24:33.51:0,34,1080	0/0:21,0:21:18.48:0,18,922	0/0:28,0:28:54.19:0,54,1344	0/0:17,0:18:21.05:0,21,453	1/1:18,10:28:51.17:1383,51,0	0/0:25,0:25:39.12:0,39,836	0/0:38,0:38:75.22:0,75,1734	0/0:18,0:18:39.13:0,39,954
chr10	2662828	.	TCTC	T	382.34	PASS	AB=0.676;AC=2;AF=0.036;AN=56;BaseQRankSum=7.192;DP=562;FS=12.008;HRun=0;HaplotypeScore=107.5903;InbreedingCoeff=-0.0418;MQ=57.92;MQ0=2;MQRankSum=-6.672;QD=7.80;ReadPosRankSum=-1.197;VQSLOD=1.8653;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:21:40.78:0,41,283	0/0:10,0:10:30.10:0,30,695	0/0:29,1:25:65.59:0,66,1391	0/0:23,0:15:11.62:0,12,769	0/0:28,0:28:84.27:0,84,1972	0/0:17,0:17:17.57:0,18,1075	0/0:17,1:18:47.97:0,48,1083	0/0:28,0:25:40.90:0,41,1145	0/0:13,0:13:39.13:0,39,879	0/0:34,0:34:99:0,102,2351	0/0:20,0:20:60.19:0,60,1414	0/0:12,0:12:36.11:0,36,772	0/0:15,0:15:45.15:0,45,1057	0/0:15,0:15:45.15:0,45,1050	0/1:17,13:30:99:156,0,715	0/0:18,0:18:54.15:0,54,1089	0/0:18,1:19:41.78:0,42,661	0/0:19,0:19:7.68:0,8,940	0/0:12,0:12:36.07:0,36,745	0/0:27,0:27:81.28:0,81,1920	0/0:18,0:18:51.09:0,51,1232	0/0:18,0:18:54.19:0,54,1307	0/0:21,0:21:60.21:0,60,1386	0/0:23,0:23:66.23:0,66,1582	0/1:9,10:19:99:315,0,157	0/0:18,0:18:54.19:0,54,1280	0/0:27,0:26:81.24:0,81,1817	0/0:6,0:6:18.06:0,18,427
chr10	2662831	.	C	CATCT	2443.72	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-0.558;DP=567;FS=2.542;HRun=0;HaplotypeScore=114.7134;InbreedingCoeff=0.9450;MQ=58.03;MQ0=2;MQRankSum=-5.220;QD=23.05;ReadPosRankSum=-2.215;VQSLOD=3.3351;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:20:30.86:0,31,297	0/0:10,0:10:18.06:0,18,295	0/0:31,0:25:28.57:0,29,382	0/0:21,0:14:20.67:0,21,291	0/0:27,0:27:57.19:0,57,928	0/0:16,0:16:30.09:0,30,467	0/0:17,0:17:36.12:0,36,588	1/1:13,18:30:60.16:1238,60,0	0/0:13,0:13:27.09:0,27,439	0/0:32,0:32:81.28:0,81,1322	0/0:19,0:19:51.15:0,51,785	0/0:12,0:12:30.10:0,30,488	0/0:16,0:16:36.12:0,36,580	0/0:16,0:16:33.06:0,33,487	1/1:30,0:30:27.96:314,28,0	0/0:16,0:16:33.06:0,33,510	1/1:7,13:20:35.73:873,36,0	0/0:18,0:19:4.27:0,4,405	0/0:11,0:11:18.06:0,18,291	0/0:28,0:28:54.18:0,54,871	0/0:19,0:19:42.13:0,42,663	0/0:18,0:18:39.13:0,39,639	0/0:24,0:24:54.18:0,54,837	0/0:23,0:23:59.79:0,60,894	1/1:13,1:23:19.72:178,20,0	0/0:19,0:19:33.11:0,33,540	0/0:25,0:24:60.19:0,60,950	0/0:6,0:6:12.04:0,12,197
chr10	2665365	.	G	GT	1800.57	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-10.533;DP=680;FS=1.190;HRun=4;HaplotypeScore=67.5325;InbreedingCoeff=0.9979;MQ=83.75;MQ0=0;MQRankSum=-1.721;QD=33.34;ReadPosRankSum=0.201;VQSLOD=4.1470;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,129,1439	0/0:8,0:8:21.06:0,21,238	0/0:19,0:19:51.13:0,51,569	0/0:20,0:20:51.11:0,51,555	0/0:26,0:26:78.22:0,78,881	0/0:15,0:15:42.12:0,42,476	0/0:21,0:21:60.15:0,60,669	0/0:35,0:35:93.24:0,93,1035	0/0:20,0:20:54.15:0,54,612	0/0:23,0:23:63.17:0,63,707	0/0:23,0:23:66.19:0,66,748	0/0:18,0:18:51.13:0,51,568	0/0:20,0:20:60.17:0,60,680	0/0:24,0:24:72.21:0,72,816	1/1:0,26:26:78.26:1067,78,0	0/0:27,0:27:78.21:0,78,874	0/0:25,0:25:75.19:0,75,839	0/0:25,0:25:72.18:0,72,805	0/0:23,0:23:66.18:0,66,740	0/0:29,0:29:75.21:0,75,849	0/0:20,0:20:60.16:0,60,671	0/0:19,0:19:54.15:0,54,612	0/0:31,0:31:90.21:0,90,989	0/0:35,0:35:99:0,99,1122	1/1:2,25:28:63.21:856,63,0	0/0:32,0:32:93.27:0,93,1054	0/0:28,0:28:81.20:0,81,895	0/0:14,0:14:42.12:0,42,476
chr10	2666596	.	G	GA	2195.72	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-11.509;DP=670;FS=5.529;HRun=9;HaplotypeScore=63.3098;InbreedingCoeff=0.9695;MQ=79.03;MQ0=0;MQRankSum=-0.471;QD=22.64;ReadPosRankSum=-1.279;VQSLOD=4.1551;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:98.88:0,99,844	0/0:16,0:16:38.98:0,39,338	0/0:23,0:22:29.80:0,30,312	0/0:18,0:18:44.93:0,45,380	0/0:30,0:30:74.90:0,75,643	0/0:21,1:22:23.81:0,24,436	0/0:23,0:23:56.91:0,57,487	1/1:5,21:26:63.12:668,63,0	0/0:29,0:30:79.97:0,80,675	0/0:23,0:23:59.87:0,60,503	0/0:26,1:27:35.78:0,36,535	0/0:21,0:21:56.96:0,57,490	0/0:25,0:25:71.97:0,72,621	0/0:23,0:23:56.98:0,57,495	1/1:3,15:18:39.11:431,39,0	0/0:21,0:21:32.66:0,33,440	1/1:4,30:34:55.17:837,55,0	0/0:23,0:23:59.98:0,60,521	0/0:16,0:18:9.79:0,10,258	0/0:21,0:21:53.98:0,54,469	0/0:25,0:25:59.97:0,60,521	0/0:20,0:20:47.98:0,48,416	0/0:22,0:22:51.83:0,52,472	0/0:24,0:24:68.94:0,69,589	1/1:4,15:19:30.31:420,30,0	0/0:36,0:36:95.30:0,95,804	0/0:40,0:40:99:0,114,986	0/0:3,0:3:9:0,9,78
chr10	2668102	.	GGT	G	588.61	PASS	AB=0.929;AC=21;AF=0.420;AN=50;BaseQRankSum=3.941;DP=569;FS=0.680;HRun=0;HaplotypeScore=81.3221;InbreedingCoeff=-0.2677;MQ=61.60;MQ0=34;MQRankSum=0.159;QD=1.46;ReadPosRankSum=1.441;VQSLOD=1.6077;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:34,0:37:10.21:58,0,10	0/0:6,0:4:3.01:0,3,45	./.	./.	0/1:16,0:15:5.79:6,0,39	0/1:11,0:9:26.50:27,0,39	0/1:23,2:22:63.03:63,0,149	0/1:31,0:31:13.88:18,0,14	0/0:23,0:23:13.52:0,14,563	0/1:15,1:14:59.21:59,0,94	./.	0/1:17,0:18:34.89:46,0,35	0/1:13,0:13:8.40:8,0,202	0/1:17,2:20:8.61:9,0,248	0/1:20,0:20:0.64:7,0,1	0/0:12,0:13:18.05:0,18,249	0/1:9,0:27:16.32:27,0,16	0/1:20,1:21:18.81:19,0,281	0/1:25,1:26:18.11:18,0,91	0/0:16,0:14:21.07:0,21,300	0/1:40,8:46:69.57:70,0,194	0/0:14,0:13:3:0,3,28	0/0:14,0:15:5.61:0,6,55	0/1:27,0:26:26.17:26,0,421	0/0:10,0:8:3:0,3,25	1/1:14,1:13:5.61:60,6,0	1/1:19,5:24:12.25:152,12,0	1/1:1,2:2:6.02:65,6,0
chr10	2668143	.	GTGTC	G	714.21	PASS	AB=1.000;AC=12;AF=0.214;AN=56;BaseQRankSum=4.020;DP=523;FS=18.078;HRun=0;HaplotypeScore=119.4534;InbreedingCoeff=0.4372;MQ=50.23;MQ0=30;MQRankSum=0.726;QD=5.58;ReadPosRankSum=-2.536;VQSLOD=0.9447;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:35,0:34:34.30:244,34,0	0/0:5,0:4:8.95:0,9,135	0/0:9,0:1:2.96:0,3,19	0/0:12,0:4:2.98:0,3,15	0/1:11,0:10:4.90:5,0,101	0/0:8,0:7:5.91:0,6,62	0/0:34,0:27:52.46:0,52,527	0/0:28,0:26:23.84:0,24,215	0/0:29,0:29:47.64:0,48,1110	0/0:19,0:18:6.96:0,7,402	0/0:12,0:12:5.99:0,6,50	0/1:21,0:19:99:135,0,351	0/0:18,0:18:27.48:0,27,535	0/0:24,0:23:59.67:0,60,700	1/1:23,0:22:8.88:72,9,0	0/0:11,0:11:33.05:0,33,519	0/0:34,0:34:17.43:0,17,266	0/0:19,5:23:1.49:0,1,560	0/0:13,0:12:19.23:0,19,159	0/0:20,0:19:27.04:0,27,521	0/0:41,0:36:45.83:0,46,544	0/0:11,0:9:14.97:0,15,123	0/1:6,0:5:14.60:15,0,38	0/0:34,0:33:74.89:0,75,1089	0/0:9,0:8:0.47:0,0,1	0/1:10,0:8:1.31:99,0,1	1/1:18,0:17:22.90:274,23,0	1/1:4,0:3:0.76:23,1,0
chr10	2668145	.	GTC	G	619.67	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=3.974;DP=520;FS=18.107;HRun=0;HaplotypeScore=105.7487;InbreedingCoeff=0.3699;MQ=51.39;MQ0=29;MQRankSum=0.342;QD=3.19;ReadPosRankSum=-2.945;VQSLOD=0.5821;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:35,0:34:5.38:117,0,5	0/0:5,0:4:8.92:0,9,97	0/0:10,0:1:2.96:0,3,19	0/0:13,0:5:3.33:0,3,15	0/0:11,0:10:11.74:0,12,112	0/1:8,0:7:2.15:2,0,52	0/0:34,0:27:22.66:0,23,458	0/0:26,0:25:50.65:0,51,333	0/0:28,0:28:46.34:0,46,907	0/1:18,0:17:26.27:26,0,324	0/0:12,0:12:5.99:0,6,50	0/1:20,0:18:63.67:64,0,251	0/0:15,3:18:9.24:0,9,423	0/0:25,0:24:49.25:0,49,586	1/1:23,0:22:8.46:54,8,0	0/0:11,0:11:33.04:0,33,445	0/0:35,0:35:46.85:0,47,360	0/0:24,0:23:13.62:0,14,498	0/1:13,0:12:0.51:1,0,175	0/0:21,0:20:27.04:0,27,410	0/1:39,0:34:1.47:1,0,396	0/0:10,0:9:17.47:0,17,132	0/1:5,0:4:7.14:7,0,50	0/0:33,0:32:56.58:0,57,825	0/0:10,0:9:0.47:0,0,1	1/1:10,0:8:11.10:150,11,0	1/1:17,1:17:43.27:277,43,0	1/1:5,0:4:11.45:79,11,0
chr10	2668147	.	CTGTGTGTCTGTGTGTCTGTGTGTCTGTGTCTG	C	385.61	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=1.732;DP=525;FS=0.000;HRun=0;HaplotypeScore=321.3146;InbreedingCoeff=0.5315;MQ=52.48;MQ0=32;MQRankSum=-2.969;QD=12.85;ReadPosRankSum=-0.383;VQSLOD=1.5600;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:33:15.23:0,15,470	0/0:6,0:5:12.04:0,12,1059	0/0:13,0:1:3.01:0,3,161	0/0:16,0:7:7.79:0,8,132	0/0:11,0:11:15.94:0,16,1253	0/0:8,0:7:6.02:0,6,322	0/0:35,0:28:66.23:0,66,4386	0/0:26,0:25:71.42:0,71,2147	0/0:28,0:28:71.05:0,71,6850	0/0:18,0:17:48.16:0,48,3710	0/0:11,0:11:9.03:0,9,730	0/0:21,0:19:42.14:0,42,4269	0/0:18,0:18:43.03:0,43,4329	0/0:26,0:25:66.23:0,66,5710	1/1:11,11:21:5.03:465,5,0	0/0:11,0:11:33.11:0,33,3773	0/0:34,0:34:54.66:0,55,4408	0/0:25,0:24:54.19:0,54,4454	0/0:13,0:12:32.98:0,33,1555	0/0:20,0:19:27.98:0,28,2621	0/0:39,0:34:59.42:0,59,5030	0/0:11,0:10:21.07:0,21,1458	0/0:5,0:4:9.03:0,9,487	0/0:33,0:32:78.27:0,78,7710	0/1:8,0:7:0:0,0,0	0/0:10,0:8:24.08:0,24,1070	0/0:18,0:17:45.15:0,45,2173	0/0:5,0:4:11.83:0,12,380
chr10	2668556	.	C	CTTCTGGAA	12764.70	PASS	AB=0.563;AC=11;AF=0.196;AN=56;BaseQRankSum=-9.046;DP=567;FS=0.840;HRun=0;HaplotypeScore=132.3011;InbreedingCoeff=0.8595;MQ=85.21;MQ0=0;MQRankSum=-15.487;QD=99.72;ReadPosRankSum=1.653;VQSLOD=5.5190;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,29:45:96.33:3869,96,0	0/0:2,0:2:6.02:0,6,173	0/0:24,0:24:66.20:0,66,1627	0/0:17,0:17:48.06:0,48,1213	0/0:17,0:17:51.15:0,51,1329	0/0:15,0:15:45.15:0,45,1362	0/0:27,0:27:81.26:0,81,2321	0/0:27,0:27:81.22:0,81,1883	0/0:22,0:22:66.20:0,66,1848	0/0:30,0:30:87.26:0,87,2199	0/0:4,0:4:12.04:0,12,363	0/0:19,0:19:57.19:0,57,1617	0/0:14,0:14:42.13:0,42,1187	0/0:25,0:25:75.24:0,75,2088	1/1:2,8:12:27.09:1091,27,0	0/0:13,0:13:39.13:0,39,1098	0/0:32,0:32:93.27:0,93,2461	0/0:26,0:26:78.24:0,78,2118	0/0:22,0:22:66.22:0,66,1818	0/0:12,0:12:36.11:0,36,924	0/0:36,0:36:99:0,108,3090	0/0:21,0:21:57.15:0,57,1383	0/0:12,0:12:30.09:0,30,770	0/0:22,0:22:66.20:0,66,1848	1/1:2,19:24:54.19:2429,54,0	0/1:4,10:18:36.72:2057,0,37	1/1:0,15:19:45.15:2073,45,0	1/1:0,9:10:27.09:1246,27,0
chr10	2669119	.	AT	A	4512.05	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=13.226;DP=648;FS=2.873;HRun=8;HaplotypeScore=66.4149;InbreedingCoeff=0.9997;MQ=84.61;MQ0=0;MQRankSum=-3.025;QD=26.70;ReadPosRankSum=2.305;VQSLOD=5.7348;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,40:41:99:1101,114,0	0/0:14,0:14:36.11:0,36,435	0/0:24,0:25:28.21:0,28,560	0/0:21,0:22:31.01:0,31,451	0/0:23,0:23:63.17:0,63,747	0/0:25,0:25:69.21:0,69,833	0/0:14,0:15:36.10:0,36,426	0/0:25,0:25:69.17:0,69,808	0/0:19,0:19:54.17:0,54,652	0/0:24,0:24:69.20:0,69,824	0/0:21,0:21:54.16:0,54,648	0/0:12,0:12:36.11:0,36,433	0/0:17,0:17:51.16:0,51,615	0/0:27,0:27:69.21:0,69,823	1/1:1,27:28:78.12:753,78,0	0/0:20,0:20:60.18:0,60,725	0/0:21,0:21:63.16:0,63,728	0/0:22,0:22:63.18:0,63,748	0/0:21,0:21:51.14:0,51,595	0/0:25,0:25:72.20:0,72,854	0/0:28,0:28:78.17:0,78,904	0/0:25,0:25:66.19:0,66,788	0/0:24,0:24:63.19:0,63,761	0/0:23,0:24:65.98:0,66,743	1/1:1,25:26:75.12:724,75,0	1/1:3,25:28:41.88:688,42,0	1/1:0,28:28:84.14:811,84,0	1/1:2,16:18:45.07:435,45,0
chr10	2669386	.	CTTTTT	C	9207.70	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=15.842;DP=720;FS=1.062;HRun=7;HaplotypeScore=137.2137;InbreedingCoeff=0.9513;MQ=74.27;MQ0=0;MQRankSum=-8.481;QD=49.24;ReadPosRankSum=3.924;VQSLOD=2.2361;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,42:46:99:2174,105,0	0/0:14,0:14:42.14:0,42,1333	0/0:18,0:18:43.33:0,43,1464	0/0:20,0:20:57.09:0,57,1546	0/0:25,0:25:75.26:0,75,2321	0/0:32,0:32:93.32:0,93,2915	0/0:20,0:20:60.20:0,60,1821	0/0:28,0:28:78.26:0,78,2308	0/0:17,0:17:51.18:0,51,1618	0/0:27,0:27:81.28:0,81,2510	0/0:26,0:26:78.26:0,78,2392	0/0:23,0:23:69.24:0,69,2190	0/0:38,0:38:99:0,114,3482	0/0:25,0:25:75.25:0,75,2311	1/1:0,30:31:78.27:1609,78,0	0/0:26,0:26:78.27:0,78,2447	0/0:19,0:19:57.20:0,57,1809	0/0:16,0:16:45.15:0,45,1382	0/0:21,0:21:63.22:0,63,1916	0/0:32,0:32:90.31:0,90,2806	0/0:31,0:31:93.32:0,93,2796	0/0:26,0:26:75.26:0,75,2380	0/0:24,0:24:72.25:0,72,2246	0/0:25,0:25:69.23:0,69,2121	1/1:0,36:36:90.31:1862,90,0	1/1:2,31:33:1.06:1755,1,0	1/1:1,27:28:68.28:1373,68,0	1/1:4,9:13:21.07:435,21,0
chr10	2675199	.	A	AAT	51.54	PASS	AB=0.873;AC=3;AF=0.063;AN=48;BaseQRankSum=1.990;DP=246;FS=6.968;HRun=0;HaplotypeScore=27.6856;InbreedingCoeff=-0.0184;MQ=39.60;MQ0=49;MQRankSum=0.780;QD=1.61;ReadPosRankSum=0.738;VQSLOD=0.0444;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:3,0:3:8.99:0,9,111	0/0:12,0:3:3.45:0,3,23	0/0:6,0:2:6.02:0,6,81	0/0:17,0:11:12.96:0,13,185	0/0:11,0:4:12:0,12,151	0/0:7,0:6:12.04:0,12,179	0/0:15,0:2:3:0,3,28	0/0:9,0:7:18.02:0,18,240	0/0:13,0:9:25.58:0,26,301	0/0:7,0:7:21.02:0,21,273	0/0:7,0:3:2.96:0,3,19	0/0:15,0:8:21.06:0,21,291	0/0:3,0:2:3:0,3,28	0/0:3,0:2:3.01:0,3,30	0/1:9,0:8:4.17:4,0,161	0/0:10,0:7:17.98:0,18,160	0/0:22,0:15:24.75:0,25,380	0/0:17,0:9:23.93:0,24,264	0/0:13,0:7:17.97:0,18,202	0/0:4,0:2:0:0,0,0	0/0:5,0:2:6.01:0,6,70	0/0:10,0:6:17.99:0,18,210	0/1:17,3:18:95.75:96,0,394	./.	0/1:2,1:2:39.20:40,0,39	./.	./.
chr10	2677667	.	T	TA	4750.42	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=14.251;DP=413;FS=13.400;HRun=6;HaplotypeScore=50.5331;InbreedingCoeff=0.9514;MQ=60.48;MQ0=2;MQRankSum=0.324;QD=29.14;ReadPosRankSum=-0.751;VQSLOD=3.9102;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,19:20:42.13:517,42,0	0/0:12,0:12:30.04:0,30,296	0/0:6,0:5:11.86:0,12,106	0/0:6,0:5:10.58:0,11,96	0/0:27,0:27:72.08:0,72,713	0/0:13,0:13:36.06:0,36,360	0/0:11,0:11:27.06:0,27,275	1/1:4,28:31:84.26:1034,84,0	0/0:11,0:11:33.07:0,33,336	0/0:22,0:22:66.15:0,66,673	0/0:22,0:22:63.14:0,63,640	0/0:8,0:8:24.05:0,24,245	0/0:11,0:11:30.07:0,30,306	0/0:10,0:10:24.05:0,24,245	1/1:0,6:6:15.05:185,15,0	0/0:7,0:7:18.04:0,18,183	1/1:5,23:28:53.68:665,54,0	0/0:7,0:7:15.03:0,15,153	0/0:22,0:20:60.14:0,60,612	0/0:24,0:24:66.15:0,66,673	0/0:2,0:2:6.01:0,6,61	0/0:6,0:6:12.02:0,12,122	0/0:18,0:17:48.11:0,48,489	0/0:5,0:5:14.99:0,15,142	1/1:0,33:33:87.27:1073,87,0	1/1:4,15:19:18.76:511,19,0	1/1:2,16:19:48.15:581,48,0	1/1:0,6:6:15.05:184,15,0
chr10	2678118	.	GA	G	6340.94	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=14.168;DP=657;FS=3.924;HRun=1;HaplotypeScore=66.7047;InbreedingCoeff=0.9991;MQ=92.84;MQ0=0;MQRankSum=-2.466;QD=38.66;ReadPosRankSum=3.430;VQSLOD=5.6423;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,50:51:99:1984,144,0	0/0:13,0:13:39.13:0,39,622	0/0:34,0:34:99:0,99,1566	0/0:30,0:30:46.73:0,47,1215	0/0:25,0:25:75.26:0,75,1192	0/0:25,0:25:75.24:0,75,1172	0/0:17,0:17:51.16:0,51,792	0/0:31,0:31:90.29:0,90,1392	0/0:27,0:27:81.26:0,81,1271	0/0:20,0:20:60.20:0,60,960	0/0:18,0:18:54.18:0,54,856	0/0:23,0:23:69.22:0,69,1075	0/0:20,0:20:60.20:0,60,954	0/0:27,0:27:75.26:0,75,1199	1/1:0,33:33:93.31:1301,93,0	0/0:22,0:22:66.21:0,66,1030	0/0:27,0:27:81.28:0,81,1295	0/0:8,0:8:24.08:0,24,379	0/0:16,0:16:48.16:0,48,766	0/0:26,0:26:78.25:0,78,1224	0/0:33,0:33:99:0,99,1545	0/0:19,0:19:57.19:0,57,911	0/0:17,0:17:51.16:0,51,792	0/0:15,0:15:45.15:0,45,716	1/1:0,17:17:45.15:629,45,0	1/1:1,28:29:40.57:1126,41,0	1/1:0,24:24:69.23:965,69,0	1/1:0,10:10:24.08:335,24,0
chr10	2678363	.	CCA	C	943.52	PASS	AB=0.882;AC=31;AF=0.620;AN=50;BaseQRankSum=-0.137;DP=514;FS=4.571;HRun=0;HaplotypeScore=77.2212;InbreedingCoeff=0.4682;MQ=61.84;MQ0=8;MQRankSum=1.469;QD=3.30;ReadPosRankSum=0.581;VQSLOD=1.3783;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:25:8.99:0,9,74	1/1:7,4:11:8.98:81,9,0	./.	./.	1/1:10,0:10:3.01:32,3,0	1/1:14,0:14:4.14:35,4,0	1/1:18,4:22:8.86:78,9,0	0/1:25,0:24:0:0,0,0	1/1:11,7:19:14.86:142,15,0	0/1:15,0:17:31.09:48,0,31	1/1:12,0:12:9:84,9,0	1/1:8,5:13:9.02:96,9,0	1/1:12,4:16:6.02:64,6,0	1/1:9,4:14:8.86:78,9,0	1/1:18,0:24:12.92:60,13,0	1/1:7,1:7:3.01:32,3,0	1/1:21,0:26:5.68:28,6,0	0/1:10,4:15:18.05:124,0,18	0/0:13,0:13:3:0,3,27	0/0:15,0:16:9:0,9,91	1/1:24,0:23:6:57,6,0	1/1:12,2:14:6.02:64,6,0	0/0:14,0:14:0:0,0,0	0/0:31,0:34:24:0,24,250	./.	0/0:16,0:17:35.81:0,36,315	0/0:15,0:14:3:0,3,25	0/0:4,0:11:3:0,3,26
chr10	2679632	.	CTCTGTCA	C	2241.85	PASS	AB=0.595;AC=5;AF=0.089;AN=56;BaseQRankSum=9.078;DP=696;FS=6.728;HRun=0;HaplotypeScore=160.7126;InbreedingCoeff=0.7492;MQ=81.83;MQ0=2;MQRankSum=-8.394;QD=38.00;ReadPosRankSum=-0.053;VQSLOD=2.9579;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,111,4148	0/0:15,0:15:42.14:0,42,1521	0/0:29,0:27:48.16:0,48,1691	0/0:26,0:25:53.16:0,53,1639	0/0:28,0:28:60.19:0,60,2177	0/0:26,0:26:72.25:0,72,2678	0/0:25,0:25:66.23:0,66,2395	0/0:21,0:21:39.13:0,39,1430	0/0:23,0:23:54.19:0,54,2046	0/0:27,0:27:66.22:0,66,2365	0/0:15,0:15:36.12:0,36,1363	0/0:20,0:20:54.17:0,54,1949	0/0:21,0:21:51.18:0,51,1864	0/0:15,0:15:42.14:0,42,1590	0/0:29,0:29:75.26:0,75,2773	0/0:25,0:25:54.19:0,54,1949	0/0:27,0:26:69.21:0,69,2425	0/0:11,0:11:21.07:0,21,796	0/0:14,0:14:30.10:0,30,1093	0/0:26,0:26:61.45:0,61,2267	0/0:62,0:62:99:0,144,5374	0/0:28,0:28:61.45:0,61,2242	0/0:13,0:13:30.10:0,30,1004	0/0:36,0:36:96.33:0,96,3539	0/0:19,0:19:45.15:0,45,1684	0/1:7,15:22:64.48:968,0,64	1/1:10,17:27:51.18:1217,51,0	1/1:6,4:10:9.03:180,9,0
chr10	2679811	.	TA	T	1453.60	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=10.184;DP=573;FS=1.742;HRun=7;HaplotypeScore=61.3762;InbreedingCoeff=0.9904;MQ=76.46;MQ0=0;MQRankSum=-1.987;QD=22.36;ReadPosRankSum=0.828;VQSLOD=3.3715;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,129,1594	0/0:10,0:10:27.09:0,27,339	0/0:16,0:16:31.59:0,32,390	0/0:8,0:8:17.92:0,18,193	0/0:28,0:28:78.21:0,78,941	0/0:29,0:29:75.23:0,75,932	0/0:16,0:16:39.12:0,39,491	0/0:23,0:23:63.18:0,63,760	0/0:16,0:16:45.14:0,45,566	0/0:24,0:24:60.18:0,60,728	0/0:22,0:22:57.17:0,57,706	0/0:7,0:7:15.04:0,15,178	0/0:9,0:9:27.09:0,27,340	0/0:13,0:13:39.11:0,39,477	0/0:0,0:17:40.25:0,40,203	0/0:21,0:21:63.18:0,63,772	0/0:31,0:31:90.29:0,90,1132	0/0:17,0:17:45.11:0,45,549	0/0:15,0:15:42.13:0,42,518	0/0:28,0:28:78.23:0,78,957	0/0:20,0:20:57.18:0,57,717	0/0:16,0:16:45.14:0,45,566	0/0:28,0:28:78.24:0,78,966	0/0:23,0:23:69.18:0,69,850	0/0:1,0:22:54.62:0,55,287	1/1:3,23:26:34.40:657,34,0	1/1:3,16:19:45.97:454,46,0	1/1:0,20:20:48.10:485,48,0
chr10	2681004	.	C	CAA	550.84	PASS	AC=2;AF=0.038;AN=52;BaseQRankSum=1.967;DP=445;FS=5.198;HRun=12;HaplotypeScore=68.0163;InbreedingCoeff=0.8107;MQ=60.52;MQ0=9;MQRankSum=0.963;QD=14.89;ReadPosRankSum=0.816;VQSLOD=2.4379;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:17,17:36:51.52:645,52,0	0/0:10,0:10:20.70:0,21,178	0/0:5,0:4:5.66:0,6,51	0/0:7,0:6:11.52:0,12,108	0/0:16,0:16:26.69:0,27,231	0/0:14,0:16:35.72:0,36,317	0/0:24,0:26:53.68:0,54,483	0/0:18,0:20:20.41:0,20,213	0/0:13,0:13:26.95:0,27,250	0/0:13,0:13:23.97:0,24,222	0/0:12,0:13:26.72:0,27,234	0/0:13,0:15:32.41:0,32,284	0/0:18,0:18:20.10:0,20,213	0/0:12,0:12:26.90:0,27,250	./.	0/0:8,0:8:18.01:0,18,166	0/0:30,0:32:68.07:0,68,573	0/0:20,0:18:41.97:0,42,383	0/0:23,0:26:24.81:0,25,393	0/0:17,0:20:17.42:0,17,260	0/0:9,0:10:26.73:0,27,234	0/0:12,0:12:29.94:0,30,270	0/0:15,0:15:20.89:0,21,241	0/0:26,0:25:50.82:0,51,458	./.	0/0:22,0:24:44.68:0,45,400	0/0:16,0:18:20.49:0,20,219	0/0:8,0:7:11.68:0,12,95
chr10	2681895	.	G	GA	1312.42	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-7.432;DP=683;FS=0.628;HRun=6;HaplotypeScore=63.1717;InbreedingCoeff=0.9992;MQ=77.43;MQ0=0;MQRankSum=-4.517;QD=26.25;ReadPosRankSum=1.360;VQSLOD=3.8597;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:96.21:0,96,978	0/0:11,0:11:27.02:0,27,266	0/0:21,0:19:50.97:0,51,488	0/0:15,0:14:33.03:0,33,317	0/0:39,0:39:99:0,105,1071	0/0:38,0:38:99:0,105,1051	0/0:16,0:16:42.03:0,42,402	0/0:34,0:34:84.17:0,84,846	0/0:30,0:30:81.18:0,81,826	0/0:35,0:35:96.21:0,96,974	0/0:24,0:24:63.13:0,63,635	0/0:21,0:21:63.13:0,63,636	0/0:20,0:20:51.10:0,51,514	0/0:21,0:21:51.11:0,51,520	1/1:2,27:29:66.21:830,66,0	0/0:25,0:25:69.14:0,69,697	0/0:22,0:22:54.12:0,54,550	0/0:18,0:18:51.11:0,51,520	0/0:16,0:16:42.08:0,42,422	0/0:35,0:35:87.19:0,87,887	0/0:14,0:14:39.09:0,39,398	0/0:26,0:26:75.17:0,75,764	0/0:19,0:19:45.10:0,45,459	0/0:28,0:28:69.11:0,69,692	1/1:4,17:21:48.15:604,48,0	0/0:24,0:24:66.13:0,66,666	0/0:26,0:26:78.18:0,78,795	0/0:18,0:18:36:0,36,341
chr10	2681986	.	GTTTT	G	3222.65	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=8.474;DP=622;FS=0.000;HRun=12;HaplotypeScore=127.0193;InbreedingCoeff=0.9563;MQ=81.21;MQ0=5;MQRankSum=-4.181;QD=23.18;ReadPosRankSum=3.552;VQSLOD=1.9013;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,26:29:63.18:916,63,0	0/0:5,0:5:9.03:0,9,162	0/0:42,0:30:37.61:0,38,424	0/0:26,0:19:22.78:0,23,283	0/0:22,0:24:72.21:0,72,1398	0/0:23,0:24:60.18:0,60,1217	0/0:13,0:14:42.12:0,42,878	0/0:27,0:29:66.88:0,67,985	0/0:17,0:19:51.06:0,51,934	0/0:27,0:29:81.16:0,81,1388	0/0:19,0:21:57.16:0,57,1070	0/0:20,0:21:57.18:0,57,1180	0/0:12,0:13:33.11:0,33,724	0/0:22,0:24:72.10:0,72,1402	1/1:20,0:20:47.80:372,48,0	0/0:21,0:23:57.15:0,57,1135	0/0:22,0:24:63.20:0,63,1333	0/0:17,0:19:51.16:0,51,1015	0/0:17,0:18:48.15:0,48,1002	0/0:28,0:34:99:0,99,1816	0/0:9,0:9:27.08:0,27,564	0/0:20,0:20:48.15:0,48,1064	0/0:18,0:21:60.18:0,60,1176	0/0:21,0:23:66.15:0,66,1359	1/1:16,0:16:35.65:283,36,0	1/1:7,26:33:4.59:967,5,0	1/1:2,26:29:44.19:639,44,0	1/1:2,10:12:15.02:227,15,0
chr10	2681990	.	TTTTTTTTTG	T	2198.51	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.071;DP=611;FS=1.560;HRun=0;HaplotypeScore=189.1858;InbreedingCoeff=0.9664;MQ=78.07;MQ0=5;MQRankSum=-7.488;QD=64.66;ReadPosRankSum=3.206;VQSLOD=3.8265;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:69.22:0,69,1049	0/0:4,0:4:9.03:0,9,279	0/0:38,0:25:55.27:0,55,825	0/0:25,0:18:37.31:0,37,506	0/0:24,0:24:72.24:0,72,2759	0/0:22,0:22:63.20:0,63,2430	0/0:15,0:15:45.15:0,45,1847	0/0:29,0:29:76.43:0,76,2141	0/0:19,0:19:54.19:0,54,1967	0/0:29,0:29:84.29:0,84,2972	0/0:22,0:22:63.21:0,63,2398	0/0:22,0:22:63.20:0,63,2323	0/0:13,0:13:36.12:0,36,1359	0/0:24,0:24:72.24:0,72,2737	1/1:2,15:17:48.16:1321,48,0	0/0:21,0:21:60.19:0,60,2211	0/0:22,0:22:63.21:0,63,2535	0/0:19,0:19:54.19:0,54,2113	0/0:17,0:17:48.16:0,48,1916	0/0:35,0:35:99:0,102,3831	0/0:10,0:10:30.10:0,30,1252	0/0:17,0:17:51.16:0,51,2063	0/0:23,0:23:66.23:0,66,2530	0/0:25,0:25:72.17:0,72,2672	1/1:0,17:17:36.07:999,36,0	0/0:30,0:30:81.01:0,81,1333	0/0:30,0:30:54.65:0,55,878	0/0:12,0:12:18.04:0,18,251
chr10	2683260	.	TCCCCTTAAACTAAGGTCAA	T	1709.29	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.861;DP=669;FS=0.000;HRun=0;HaplotypeScore=318.6250;InbreedingCoeff=0.9550;MQ=80.40;MQ0=0;MQRankSum=-5.919;QD=51.80;ReadPosRankSum=0.004;VQSLOD=2.1562;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,19:33:36.12:1804,36,0	0/0:5,0:5:15.05:0,15,1354	0/0:16,0:16:42.07:0,42,2093	0/0:18,0:18:51.17:0,51,3165	0/0:18,0:18:54.19:0,54,4699	0/0:28,0:28:78.25:0,78,6146	0/0:18,0:18:51.17:0,51,3985	0/0:32,0:32:84.29:0,84,5834	0/0:31,0:31:93.31:0,93,7337	0/0:34,0:34:96.33:0,96,7361	0/0:27,0:27:78.25:0,78,6120	0/0:24,0:24:69.22:0,69,5534	0/0:26,0:26:69.22:0,69,5734	0/0:34,0:34:99:0,99,7853	0/0:32,0:32:96.33:0,96,7997	0/0:27,0:27:78.25:0,78,6072	0/0:14,0:14:42.14:0,42,3474	0/0:10,0:10:30.10:0,30,2386	0/0:19,0:19:54.18:0,54,3462	0/0:15,0:15:39.12:0,39,3261	0/0:22,0:22:63.22:0,63,5271	0/0:29,0:29:81.27:0,81,6214	0/0:26,0:26:75.24:0,75,6374	0/0:35,0:35:99:0,102,7867	0/0:27,0:27:72.23:0,72,5205	0/0:30,0:30:84.26:0,84,5906	0/0:35,0:35:93.32:0,93,7278	0/0:4,0:4:12.04:0,12,912
chr10	2683713	.	CTGTG	C	196.80	PASS	AB=0.941;AC=7;AF=0.135;AN=52;BaseQRankSum=0.595;DP=553;FS=5.707;HRun=0;HaplotypeScore=103.9602;InbreedingCoeff=0.1599;MQ=66.43;MQ0=9;MQRankSum=1.238;QD=1.67;ReadPosRankSum=0.868;VQSLOD=1.5950;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,1:32:3.93:0,4,25	0/0:6,0:6:6.02:0,6,121	./.	./.	0/0:13,0:12:3.01:0,3,65	0/0:13,0:13:9.03:0,9,188	0/0:24,0:22:14.97:0,15,201	0/0:35,0:34:2.98:0,3,21	0/1:13,2:15:36.93:37,0,106	0/0:22,0:21:9.03:0,9,197	0/0:15,0:15:3.01:0,3,70	0/0:8,0:7:3.01:0,3,30	0/0:18,0:19:23.78:0,24,337	0/0:11,0:11:6.02:0,6,140	1/1:11,8:19:12.04:184,12,0	0/0:12,0:12:16.18:0,16,197	0/0:10,0:19:9.02:0,9,147	0/0:9,0:10:5.85:0,6,83	0/0:15,0:14:3.01:0,3,66	0/0:16,0:16:3.01:0,3,62	0/1:36,0:35:24.31:24,0,312	0/0:16,0:16:3.01:0,3,70	0/0:18,0:17:0:0,0,0	0/1:30,1:32:24.89:25,0,296	1/1:12,1:16:3.01:46,3,0	0/0:31,0:31:13.25:0,13,194	0/0:15,0:15:6.02:0,6,98	0/0:6,0:6:0.47:0,0,1
chr10	2684005	.	G	GA	5426.47	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-0.028;DP=483;FS=6.488;HRun=2;HaplotypeScore=149.3126;InbreedingCoeff=0.8836;MQ=56.72;MQ0=0;MQRankSum=-5.653;QD=11.69;ReadPosRankSum=1.095;VQSLOD=3.3216;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:21:39.56:242,40,0	1/1:7,3:10:21.24:166,21,0	0/0:8,0:8:20.47:0,20,123	0/0:11,0:11:22.69:0,23,135	1/1:12,0:12:21.34:96,21,0	1/1:17,3:20:46.63:260,47,0	1/1:13,2:15:35.11:189,35,0	1/1:13,3:16:39.80:286,40,0	1/1:21,2:23:27.52:198,28,0	1/1:24,1:25:61.18:386,61,0	1/1:20,2:22:45.44:262,45,0	1/1:24,2:26:55.90:277,56,0	1/1:15,5:20:45.74:313,46,0	1/1:17,3:20:43.85:268,44,0	1/1:25,2:27:59.07:287,59,0	1/1:21,2:23:52.79:299,53,0	1/1:7,0:7:16.77:74,17,0	1/1:5,1:6:13.69:82,14,0	1/1:10,1:11:29.50:162,29,0	1/1:20,0:20:42.63:178,43,0	1/1:4,0:4:11.12:71,11,0	1/1:22,1:23:46.98:226,47,0	1/1:15,1:16:35.05:171,35,0	1/1:11,0:11:11.21:46,11,0	1/1:30,3:33:72.27:363,72,0	1/1:28,1:29:70.69:320,71,0	1/1:21,1:22:44.08:185,44,0	1/1:2,0:2:4.87:18,5,0
chr10	2685040	.	CAGAGAGAGAGAGAGAGAGAG	C	765.28	PASS	AB=0.932;AC=6;AF=0.125;AN=48;BaseQRankSum=4.776;DP=446;FS=12.372;HRun=0;HaplotypeScore=184.4643;InbreedingCoeff=0.3331;MQ=45.64;MQ0=24;MQRankSum=-4.265;QD=10.34;ReadPosRankSum=-0.971;VQSLOD=1.6936;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:16:0.89:2,1,0	./.	./.	./.	0/0:18,0:18:15.05:0,15,637	0/0:18,0:18:15.05:0,15,808	0/0:17,0:19:1.25:0,1,3	0/0:24,0:22:27.14:0,27,661	0/0:25,0:23:21.07:0,21,1186	0/0:19,0:19:21.07:0,21,1466	0/0:11,0:9:9.02:0,9,419	0/0:16,0:16:18.53:0,19,1161	0/0:18,0:22:30.57:0,31,1623	0/0:16,0:16:18.06:0,18,1084	1/1:6,6:13:15.05:776,15,0	0/0:11,0:11:9.03:0,9,613	0/0:11,0:13:18.53:0,19,591	0/0:16,0:16:28.01:0,28,1756	0/0:16,0:12:6.02:0,6,463	0/0:17,0:16:15.99:0,16,590	0/0:25,0:19:16.68:0,17,965	0/0:13,0:12:3.01:0,3,157	0/0:15,0:15:11.69:0,12,557	0/0:14,0:14:9.01:0,9,257	./.	0/1:23,0:20:39.05:39,0,517	0/1:17,0:19:57.57:58,0,443	0/0:5,0:3:3.01:0,3,40
chr10	2685311	.	T	TA	762.95	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-5.394;DP=477;FS=2.577;HRun=8;HaplotypeScore=43.1632;InbreedingCoeff=0.9866;MQ=82.20;MQ0=0;MQRankSum=-1.205;QD=23.84;ReadPosRankSum=0.173;VQSLOD=3.8660;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:56.17:0,56,519	0/0:9,0:9:27:0,27,242	0/0:21,0:21:20.44:0,20,300	0/0:8,0:8:17.96:0,18,163	0/0:26,0:26:75.04:0,75,686	0/0:20,0:20:45.02:0,45,412	0/0:10,0:10:27.01:0,27,247	0/0:38,0:38:95.94:0,96,854	0/0:24,0:24:62.96:0,63,559	0/0:14,0:14:36.01:0,36,329	0/0:17,0:17:42.01:0,42,384	0/0:13,0:13:30:0,30,271	0/0:13,0:13:33:0,33,297	0/0:15,0:15:33:0,33,302	1/1:0,12:12:33.10:381,33,0	0/0:9,0:9:27.01:0,27,243	0/0:18,0:18:45.02:0,45,412	0/0:8,0:8:21.01:0,21,192	0/0:28,0:28:77.97:0,78,691	0/0:20,0:20:60.03:0,60,549	0/0:10,0:10:27.01:0,27,247	0/0:11,0:11:30.02:0,30,274	0/0:17,0:17:39:0,39,351	0/0:10,0:10:27.01:0,27,247	1/1:1,19:20:45.09:504,45,0	0/0:16,0:17:44.06:0,44,390	0/0:36,0:36:99:0,99,892	0/0:8,0:8:24.01:0,24,219
chr10	2685501	.	G	GAATCACA	5129.59	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=-5.136;DP=502;FS=0.000;HRun=0;HaplotypeScore=110.8060;InbreedingCoeff=0.7568;MQ=62.26;MQ0=0;MQRankSum=-10.409;QD=78.92;ReadPosRankSum=-0.587;VQSLOD=4.8085;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:63.19:0,63,1520	0/0:10,0:10:27.09:0,27,693	0/0:13,0:12:29.21:0,29,717	0/0:17,0:16:19.70:0,20,886	0/0:27,0:27:75.26:0,75,1858	0/0:18,0:18:51.17:0,51,1241	0/0:7,0:7:21.07:0,21,532	0/0:31,0:31:87.29:0,87,2072	0/0:14,0:14:42.14:0,42,1011	0/0:33,0:33:93.31:0,93,2314	0/0:28,0:28:84.29:0,84,2155	0/0:8,0:8:21.07:0,21,485	0/0:11,0:11:30.10:0,30,769	0/0:15,0:15:45.15:0,45,1065	1/1:4,15:20:54.19:2092,54,0	0/0:9,0:9:27.09:0,27,693	0/0:19,0:19:33.46:0,33,1130	0/1:14,0:14:24.85:25,0,685	0/0:19,0:19:54.18:0,54,1257	0/0:27,0:27:78.22:0,78,1833	0/0:6,0:6:15.05:0,15,375	0/0:14,0:14:42.14:0,42,1078	0/0:22,0:22:66.23:0,66,1691	0/0:4,0:4:12.04:0,12,306	1/1:6,22:31:81.28:3013,81,0	0/0:22,0:22:60.19:0,60,1478	0/0:32,0:32:93.32:0,93,2326	0/0:8,0:8:18.06:0,18,462
chr10	2685852	.	AT	A	1015.22	PASS	AB=0.770;AC=6;AF=0.107;AN=56;BaseQRankSum=6.588;DP=593;FS=1.832;HRun=9;HaplotypeScore=69.5901;InbreedingCoeff=0.5531;MQ=70.64;MQ0=7;MQRankSum=-2.522;QD=9.58;ReadPosRankSum=0.176;VQSLOD=2.1512;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:33:87.05:0,87,989	0/0:4,0:4:3.01:0,3,35	0/1:53,2:26:21.43:21,0,197	0/0:43,1:23:5.45:0,5,186	0/0:27,0:27:78.22:0,78,892	0/0:17,1:18:20.66:0,21,482	0/0:18,0:18:51.10:0,51,570	0/0:23,0:23:54.16:0,54,623	0/0:16,0:16:45.09:0,45,501	0/0:18,0:18:51.14:0,51,581	0/0:18,1:19:45.13:0,45,519	0/0:17,0:17:42.12:0,42,485	0/0:15,0:15:45.13:0,45,518	0/0:20,0:20:57.13:0,57,635	0/0:18,0:18:51.05:0,51,283	0/0:9,0:9:19.30:0,19,211	0/0:32,0:32:87.24:0,87,994	0/0:24,0:24:59.95:0,60,678	0/0:23,0:22:60.18:0,60,692	0/0:23,1:24:66.20:0,66,762	0/0:13,0:13:36.11:0,36,415	0/0:18,0:18:42.12:0,42,485	0/0:14,1:15:14.64:0,15,412	0/0:11,0:11:33.10:0,33,381	0/0:26,1:27:47.54:0,48,400	0/1:5,14:19:52.83:333,0,53	1/1:0,14:14:42.02:384,42,0	1/1:3,15:18:45.02:412,45,0
chr10	2687587	.	A	ATGCTG	5621.36	PASS	AB=0.745;AC=10;AF=0.179;AN=56;BaseQRankSum=-2.587;DP=638;FS=1.681;HRun=0;HaplotypeScore=106.5969;InbreedingCoeff=0.7300;MQ=63.28;MQ0=1;MQRankSum=-5.642;QD=44.97;ReadPosRankSum=2.469;VQSLOD=5.1639;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:93.32:0,93,2140	0/0:11,0:11:30.09:0,30,655	0/0:15,0:14:39.13:0,39,790	0/0:24,0:24:63.20:0,63,1304	0/0:30,0:30:90.30:0,90,2013	0/0:19,0:19:51.18:0,51,1189	0/0:18,0:18:48.16:0,48,1088	0/0:32,0:32:90.28:0,90,1858	0/0:26,0:26:72.23:0,72,1632	0/0:32,0:32:96.31:0,96,2140	0/0:27,0:27:81.28:0,81,1865	0/0:24,0:24:66.23:0,66,1538	0/0:18,0:18:54.19:0,54,1221	0/0:16,0:16:39.12:0,39,909	1/1:5,18:24:36.12:1193,36,0	0/0:28,0:28:78.24:0,78,1708	0/0:24,0:24:66.21:0,66,1472	0/1:18,0:19:23.39:23,0,1175	0/0:18,0:18:54.19:0,54,1240	0/0:25,0:25:75.26:0,75,1681	0/0:32,0:32:96.33:0,96,2216	0/0:19,0:19:51.18:0,51,1186	0/0:18,0:18:54.19:0,54,1238	0/0:23,0:23:66.23:0,66,1507	1/1:2,18:21:30.10:996,30,0	0/1:4,23:26:18.75:1513,0,19	1/1:2,24:26:51.17:1696,51,0	1/1:0,2:2:6.02:200,6,0
chr10	2688372	.	TGGCTA	T	423.87	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.371;DP=552;FS=1.426;HRun=0;HaplotypeScore=92.4500;InbreedingCoeff=0.7967;MQ=54.47;MQ0=19;MQRankSum=-4.522;QD=38.53;ReadPosRankSum=-1.391;VQSLOD=3.1150;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,9:11:24.08:517,24,0	0/0:7,0:7:21.07:0,21,666	0/0:8,0:3:6.02:0,6,190	0/0:10,0:2:6.02:0,6,190	0/0:21,0:21:60.21:0,60,1854	0/0:27,0:27:78.27:0,78,2408	0/0:16,0:14:36.12:0,36,1105	0/0:38,0:28:57.18:0,57,1717	0/0:16,0:16:45.14:0,45,1353	0/0:13,0:13:39.13:0,39,1226	0/0:16,0:16:45.14:0,45,1357	0/0:26,0:26:78.27:0,78,2397	0/0:27,0:27:81.28:0,81,2483	0/0:18,0:18:51.18:0,51,1559	0/0:27,0:27:78.27:0,78,2469	0/0:19,0:19:51.18:0,51,1611	0/0:31,0:31:84.18:0,84,2439	0/0:7,0:7:12.04:0,12,379	0/0:10,0:7:21.07:0,21,666	0/0:23,0:23:69.24:0,69,2094	0/0:24,0:23:66.23:0,66,2025	0/0:20,0:20:60.16:0,60,1689	0/0:26,0:24:69.24:0,69,2052	0/0:26,0:26:75.26:0,75,2270	0/0:16,0:16:45.15:0,45,1428	0/0:24,0:23:60.21:0,60,1849	0/0:34,0:34:99:0,102,3139	0/0:11,0:11:27.09:0,27,842
chr10	2688603	.	GT	G	619.74	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.826;DP=605;FS=9.199;HRun=9;HaplotypeScore=63.7824;InbreedingCoeff=0.9926;MQ=61.20;MQ0=1;MQRankSum=3.978;QD=15.49;ReadPosRankSum=2.295;VQSLOD=3.2823;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:74.90:0,75,854	0/0:10,0:10:30.09:0,30,346	0/0:15,0:12:18.11:0,18,253	0/0:14,1:14:24.02:0,24,247	0/0:31,0:31:87.26:0,87,1003	0/0:24,0:24:72.21:0,72,831	0/0:26,0:26:66.18:0,66,752	0/0:32,0:32:81.22:0,81,918	0/0:23,0:23:63.19:0,63,727	0/0:28,0:28:75.19:0,75,838	0/0:26,0:26:75.22:0,75,858	0/0:13,0:13:33.10:0,33,381	0/0:14,0:14:36.07:0,36,394	0/0:21,0:21:54.16:0,54,621	1/1:7,18:25:48.02:439,48,0	0/0:15,0:15:39.10:0,39,441	0/0:19,0:19:54.16:0,54,623	0/0:18,0:18:47.81:0,48,530	0/0:14,0:11:24.07:0,24,277	0/0:26,0:26:78.19:0,78,885	0/0:17,0:17:48.09:0,48,530	0/0:30,0:30:84.25:0,84,966	0/0:20,0:20:57.17:0,57,658	0/0:11,0:11:27.08:0,27,312	1/1:2,13:15:33.02:302,33,0	0/0:39,0:39:99:0,99,1135	0/0:36,0:36:99:0,99,1141	0/0:12,0:12:36.01:0,36,374
chr10	2690763	.	T	TAAAAAG	2786.54	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.270;DP=599;FS=0.691;HRun=0;HaplotypeScore=126.0779;InbreedingCoeff=0.9198;MQ=54.58;MQ0=17;MQRankSum=-8.831;QD=89.89;ReadPosRankSum=2.381;VQSLOD=5.6069;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:23:66.21:0,66,1574	0/0:7,0:7:21.07:0,21,531	0/0:22,0:3:9.03:0,9,176	0/0:27,0:3:6.02:0,6,119	0/0:22,0:22:63.22:0,63,1588	0/0:27,0:27:81.26:0,81,1999	0/0:16,0:16:48.16:0,48,1215	0/0:41,0:36:99:0,108,2727	0/0:19,0:19:57.20:0,57,1442	0/0:27,0:27:81.27:0,81,1979	0/0:30,0:30:84.28:0,84,2071	0/0:16,0:16:48.16:0,48,1214	0/0:15,0:15:45.15:0,45,1136	0/0:20,0:20:60.21:0,60,1518	1/1:0,17:17:51.18:1595,51,0	0/0:19,0:18:54.18:0,54,1318	0/0:29,0:29:81.26:0,81,1985	0/0:12,0:12:33.11:0,33,835	0/0:25,0:22:60.21:0,60,1518	0/0:29,0:29:87.30:0,87,2166	0/0:14,0:14:42.14:0,42,1059	0/0:15,0:15:45.15:0,45,1137	0/0:26,0:26:75.24:0,75,1830	0/0:17,0:17:51.18:0,51,1290	1/1:0,14:14:42.14:1313,42,0	0/0:33,0:33:96.32:0,96,2358	0/0:24,0:24:72.25:0,72,1819	0/0:12,0:12:36.12:0,36,908
chr10	2690764	.	T	TA	631.99	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.418;DP=598;FS=2.298;HRun=0;HaplotypeScore=77.1832;InbreedingCoeff=0.9174;MQ=54.62;MQ0=17;MQRankSum=-8.618;QD=20.39;ReadPosRankSum=2.963;VQSLOD=5.0990;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:22:49.43:0,49,779	0/0:7,0:7:21.07:0,21,294	0/0:21,0:3:8.62:0,9,92	0/0:26,1:3:6.01:0,6,69	0/0:23,0:23:63.20:0,63,865	0/0:26,0:26:78.26:0,78,1090	0/0:16,0:16:48.16:0,48,671	0/0:42,0:37:99:0,108,1495	0/0:19,0:19:57.18:0,57,782	0/0:30,0:30:81.25:0,81,1100	0/0:30,0:30:90.26:0,90,1195	0/0:16,0:16:48.15:0,48,656	0/0:15,0:15:45.15:0,45,629	0/0:20,0:20:60.20:0,60,839	1/1:0,17:17:50.92:415,51,0	0/0:17,0:17:51.17:0,51,713	0/0:28,0:28:78.22:0,78,1065	0/0:12,0:12:33.11:0,33,461	0/0:25,0:22:63.17:0,63,858	0/0:29,0:29:87.27:0,87,1178	0/0:14,0:14:42.11:0,42,566	0/0:15,0:15:45.15:0,45,629	0/0:26,0:26:78.22:0,78,1015	0/0:18,0:18:51.17:0,51,713	1/1:0,14:14:41.92:339,42,0	0/0:32,0:32:96.31:0,96,1313	0/0:24,0:24:72.18:0,72,967	0/0:12,0:12:36.12:0,36,499
chr10	2690791	.	TCTTTG	T	1902.28	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.839;DP=580;FS=1.384;HRun=0;HaplotypeScore=119.2120;InbreedingCoeff=0.9912;MQ=56.90;MQ0=7;MQRankSum=-9.519;QD=44.24;ReadPosRankSum=0.136;VQSLOD=3.7450;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:26:70.42:0,70,1901	0/0:6,0:6:18.03:0,18,482	0/0:23,0:13:39.13:0,39,1125	0/0:16,0:6:18.06:0,18,514	0/0:30,0:30:81.19:0,81,2369	0/0:25,0:25:72.25:0,72,2125	0/0:15,0:15:39.13:0,39,1199	0/0:31,0:29:81.28:0,81,2369	0/0:16,0:16:42.58:0,43,1133	0/0:28,0:28:78.27:0,78,2336	0/0:24,0:24:69.15:0,69,1936	0/0:16,0:16:45.15:0,45,1361	0/0:17,0:17:48.16:0,48,1447	0/0:21,0:21:60.19:0,60,1776	1/1:2,25:27:63.17:1260,63,0	0/0:22,0:22:60.21:0,60,1738	0/0:23,0:23:50.32:0,50,1582	0/0:13,0:13:33.11:0,33,925	0/0:14,0:14:42.14:0,42,1228	0/0:24,0:24:72.25:0,72,2148	0/0:12,0:12:33.11:0,33,1012	0/0:22,0:22:63.22:0,63,1890	0/0:24,0:24:63.22:0,63,1915	0/0:17,0:17:42.14:0,42,1210	1/1:3,13:16:39.09:764,39,0	0/0:30,0:30:84.28:0,84,2339	0/0:30,0:30:87.30:0,87,2572	0/0:11,0:11:32.90:0,33,931
chr10	2691362	.	C	CT	1162.32	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=6.219;DP=399;FS=4.065;HRun=9;HaplotypeScore=45.8851;InbreedingCoeff=0.8441;MQ=59.70;MQ0=7;MQRankSum=-2.376;QD=25.83;ReadPosRankSum=2.021;VQSLOD=4.3087;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:41.98:0,42,364	0/0:5,0:5:11.99:0,12,104	0/0:8,0:3:6:0,6,52	0/0:9,0:5:5.98:0,6,49	0/0:21,0:21:41.97:0,42,361	0/0:15,0:15:29.99:0,30,260	0/0:11,0:11:29.99:0,30,260	0/0:23,0:22:41.96:0,42,361	0/0:22,0:22:56.96:0,57,492	0/0:25,0:24:56.96:0,57,493	0/0:16,0:16:23.96:0,24,208	0/0:14,0:14:29.95:0,30,255	0/0:19,0:19:50.95:0,51,435	0/0:13,0:13:35.97:0,36,305	0/0:14,0:14:35.98:0,36,311	0/0:21,0:21:50.97:0,51,440	0/0:18,0:18:47.99:0,48,417	0/0:19,0:18:41.99:0,42,364	0/0:11,0:10:20.98:0,21,182	0/0:18,0:17:44.94:0,45,383	0/0:6,0:6:12:0,12,104	0/0:4,0:4:5.98:0,6,49	0/0:11,0:11:26.88:0,27,224	0/0:2,0:2:6:0,6,52	0/0:12,0:12:35.98:0,36,310	1/1:2,8:10:24.06:259,24,0	1/1:5,20:25:69.16:746,69,0	1/1:1,9:10:27.07:299,27,0
chr10	2691374	.	T	TA	2040.12	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=5.597;DP=364;FS=0.000;HRun=6;HaplotypeScore=40.3699;InbreedingCoeff=0.8827;MQ=64.03;MQ0=1;MQRankSum=0.401;QD=27.57;ReadPosRankSum=0.943;VQSLOD=3.4846;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:39.08:0,39,397	0/0:6,0:6:15.03:0,15,153	0/0:3,0:2:6:0,6,56	0/0:7,0:6:3.15:0,3,81	0/0:20,0:20:45.10:0,45,459	0/0:13,0:13:39.05:0,39,382	0/0:14,0:14:42.03:0,42,399	0/0:19,0:19:48.11:0,48,490	0/0:20,0:20:57.11:0,57,575	0/0:24,0:23:51.10:0,51,520	0/0:12,0:12:30.04:0,30,293	0/0:10,0:10:27.06:0,27,275	0/0:18,0:18:51.11:0,51,520	0/0:9,0:9:24.05:0,24,245	1/1:1,13:14:36.12:453,36,0	0/0:18,0:18:51.11:0,51,520	0/0:18,0:18:51.11:0,51,519	0/0:17,0:17:36.08:0,36,368	0/0:12,0:12:33.07:0,33,336	0/0:15,0:15:36.08:0,36,367	0/0:4,0:4:12.03:0,12,122	0/0:4,0:4:6:0,6,55	0/0:10,0:10:24.05:0,24,244	0/0:2,0:2:6.01:0,6,61	1/1:2,13:15:36.12:453,36,0	1/1:2,6:8:21.07:264,21,0	1/1:7,19:26:54.16:665,54,0	1/1:0,10:11:30.10:377,30,0
chr10	2691524	.	GA	G	1133.15	PASS	AB=0.947;AC=7;AF=0.125;AN=56;BaseQRankSum=5.563;DP=474;FS=14.342;HRun=7;HaplotypeScore=55.4682;InbreedingCoeff=0.8155;MQ=79.55;MQ0=0;MQRankSum=-2.008;QD=18.28;ReadPosRankSum=1.750;VQSLOD=2.1449;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:58.07:0,58,719	0/0:4,0:4:12.04:0,12,151	0/1:17,1:14:27.35:27,0,216	0/0:20,0:14:12.28:0,12,230	0/0:27,0:27:69.22:0,69,868	0/0:23,0:23:57.17:0,57,704	0/0:13,0:13:33.11:0,33,415	0/0:30,0:30:81.23:0,81,983	0/0:25,0:25:72.23:0,72,905	0/0:19,0:19:48.15:0,48,603	0/0:19,0:19:39.11:0,39,478	0/0:12,0:12:30.09:0,30,365	0/0:11,0:11:27.09:0,27,339	0/0:13,0:13:36.12:0,36,453	0/0:18,0:18:42.13:0,42,518	0/0:20,0:20:57.18:0,57,717	0/0:18,0:18:45.14:0,45,566	0/0:18,0:18:51.13:0,51,616	0/0:22,0:22:66.21:0,66,830	0/0:23,0:23:51.16:0,51,630	0/0:8,0:8:18.05:0,18,214	0/0:11,0:11:27.07:0,27,327	0/0:13,0:13:33.11:0,33,415	0/0:6,0:6:18.06:0,18,226	0/0:16,0:16:42.13:0,42,518	1/1:1,14:15:42.09:428,42,0	1/1:2,16:18:48.11:490,48,0	1/1:0,11:11:33.08:337,33,0
chr10	2691547	.	TCC	T	1295.67	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=4.753;DP=460;FS=0.000;HRun=10;HaplotypeScore=64.4396;InbreedingCoeff=0.9040;MQ=75.63;MQ0=2;MQRankSum=-0.284;QD=23.14;ReadPosRankSum=2.091;VQSLOD=3.0019;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,21:21:54.15:602,54,0	0/0:7,0:7:21.06:0,21,309	0/0:25,0:19:1.83:0,2,236	0/0:32,0:17:14.28:0,14,153	0/0:25,0:25:72.25:0,72,1135	0/0:20,0:20:54.17:0,54,825	0/0:13,0:13:39.13:0,39,616	0/0:21,0:21:42.10:0,42,587	0/0:24,0:26:71.18:0,71,1036	0/0:17,0:17:45.14:0,45,690	0/0:19,0:19:50.91:0,51,772	0/0:9,0:9:27.09:0,27,429	0/0:8,0:8:24.08:0,24,379	0/0:10,0:10:30.10:0,30,464	1/1:1,15:16:33.09:368,33,0	0/0:20,0:20:54.18:0,54,857	0/0:18,1:19:11.71:0,12,629	0/0:14,0:14:39.13:0,39,618	0/0:18,0:18:33.11:0,33,522	0/0:16,0:16:48.14:0,48,716	0/0:6,0:7:17.16:0,17,260	0/0:8,0:8:18.06:0,18,286	0/0:15,0:16:35.61:0,36,530	0/0:10,0:10:27.09:0,27,411	1/1:2,16:18:42.11:468,42,0	0/0:14,0:14:36.12:0,36,571	0/0:16,0:16:42.14:0,42,665	0/0:8,0:8:21.07:0,21,333
chr10	2691689	.	G	GA	1606.03	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-4.104;DP=540;FS=1.351;HRun=2;HaplotypeScore=51.2362;InbreedingCoeff=0.9907;MQ=70.16;MQ0=1;MQRankSum=0.455;QD=38.24;ReadPosRankSum=1.604;VQSLOD=4.1541;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,114,1592	0/0:6,0:6:18.05:0,18,234	0/0:24,0:16:48.15:0,48,634	0/0:16,0:13:36.11:0,36,452	0/0:25,0:25:66.22:0,66,920	0/0:21,0:21:63.21:0,63,878	0/0:20,0:20:57.18:0,57,781	0/0:24,0:21:57.66:0,58,796	0/0:16,0:16:45.15:0,45,629	0/0:21,0:20:57.18:0,57,783	0/0:21,0:21:54.18:0,54,741	0/0:14,0:14:39.13:0,39,544	0/0:16,0:16:48.16:0,48,670	0/0:15,0:15:45.15:0,45,627	0/0:17,0:17:48.16:0,48,666	0/0:16,0:16:42.14:0,42,587	0/0:19,0:19:57.19:0,57,797	0/0:15,0:15:36.09:0,36,481	0/0:26,0:26:75.24:0,75,1033	0/0:21,0:21:63.18:0,63,847	0/0:25,0:25:69.23:0,69,958	0/0:10,0:10:30.10:0,30,420	0/0:11,0:11:27.09:0,27,377	0/0:34,0:34:96.28:0,96,1320	0/0:24,0:24:69.22:0,69,950	1/1:0,15:14:42.10:644,42,0	1/1:0,22:21:54.18:863,54,0	1/1:0,5:5:15.05:240,15,0
chr10	2691792	.	C	CAA	747.86	PASS	AB=0.955;AC=8;AF=0.148;AN=54;BaseQRankSum=3.627;DP=412;FS=1.827;HRun=10;HaplotypeScore=105.7327;InbreedingCoeff=0.5240;MQ=44.98;MQ0=13;MQRankSum=-3.618;QD=9.12;ReadPosRankSum=-1.626;VQSLOD=1.1170;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:18:11.83:0,12,122	0/0:10,0:11:17.89:0,18,183	0/1:3,0:1:0:0,0,0	./.	0/1:20,0:22:12.24:12,0,102	0/0:11,0:10:14.93:0,15,152	0/0:16,0:15:17.87:0,18,173	0/0:16,0:14:17.87:0,18,167	0/0:17,0:18:19.98:0,20,181	0/0:15,0:14:14.97:0,15,144	0/0:21,0:22:23.63:0,24,290	0/0:16,0:16:17.59:0,18,181	0/0:14,0:14:20.93:0,21,213	0/0:11,0:11:5.43:0,5,60	0/0:8,0:8:8.96:0,9,76	0/0:8,0:9:11.66:0,12,93	0/0:19,0:20:29.14:0,29,285	0/1:11,0:8:0:0,0,0	0/0:19,0:17:38.69:0,39,358	0/0:16,0:15:14.76:0,15,139	0/0:14,0:12:23.82:0,24,216	0/0:16,0:15:26.74:0,27,274	0/0:17,0:16:11.74:0,12,108	0/0:20,0:20:26.54:0,27,245	0/0:16,0:16:23.92:0,24,231	0/1:14,4:17:9.52:216,0,10	1/1:12,10:22:41.97:554,42,0	1/1:3,2:5:6.02:90,6,0
chr10	2691819	.	A	AAAAG	688.57	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=2.072;DP=488;FS=2.849;HRun=0;HaplotypeScore=98.8994;InbreedingCoeff=0.8586;MQ=58.67;MQ0=9;MQRankSum=-5.642;QD=19.67;ReadPosRankSum=-1.439;VQSLOD=3.2893;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:25.97:0,26,369	0/0:8,0:8:17.97:0,18,211	0/0:25,0:12:24.08:0,24,266	0/0:13,0:5:5.52:0,6,38	0/0:25,0:25:45.78:0,46,537	0/0:20,0:19:51.37:0,51,597	0/0:13,0:12:18.90:0,19,326	0/0:28,0:28:64.87:0,65,664	0/0:14,0:14:33.40:0,33,412	0/0:17,0:17:30.06:0,30,367	0/0:18,0:18:27.80:0,28,417	0/0:17,0:17:41.98:0,42,474	0/0:17,0:17:38.85:0,39,391	0/0:13,0:12:31.55:0,32,350	1/1:7,7:18:16.10:386,16,0	0/0:14,0:14:22.66:0,23,355	0/0:25,0:24:22.45:0,22,386	0/0:17,0:15:24.46:0,24,268	0/0:21,0:18:38.27:0,38,380	0/0:20,0:19:30.94:0,31,445	0/0:12,0:12:18.04:0,18,219	0/0:19,0:18:26.66:0,27,274	0/0:15,0:15:29.21:0,29,334	0/0:19,0:18:45.01:0,45,567	1/1:4,11:17:7.31:412,7,0	0/0:13,0:12:20.56:0,21,218	0/0:24,0:24:14.36:0,14,231	0/0:6,0:6:15.01:0,15,147
chr10	2692281	.	CT	C	1212.12	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.622;DP=632;FS=0.667;HRun=1;HaplotypeScore=60.8977;InbreedingCoeff=0.9909;MQ=59.99;MQ0=5;MQRankSum=1.716;QD=34.63;ReadPosRankSum=2.155;VQSLOD=3.6226;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,129,2037	0/0:6,0:6:18.05:0,18,265	0/0:23,0:15:33.04:0,33,598	0/0:21,0:17:48.16:0,48,732	0/0:21,0:21:63.18:0,63,960	0/0:14,0:14:42.14:0,42,672	0/0:27,0:27:81.28:0,81,1292	0/0:26,0:26:72.23:0,72,1092	0/0:24,0:24:69.24:0,69,1100	0/0:25,0:25:75.26:0,75,1199	0/0:26,0:26:78.27:0,78,1247	0/0:26,0:25:75.24:0,75,1176	0/0:24,0:24:72.25:0,72,1145	0/0:19,0:19:57.18:0,57,888	0/0:24,0:24:72.20:0,72,1081	0/0:12,0:12:36.12:0,36,576	1/1:1,34:35:63.56:1307,64,0	0/0:12,0:12:33.11:0,33,527	0/0:21,0:18:51.14:0,51,770	0/0:21,0:21:63.21:0,63,1007	0/0:31,0:31:93.32:0,93,1484	0/0:18,0:18:54.17:0,54,841	0/0:21,0:21:60.19:0,60,934	0/0:22,0:22:66.23:0,66,1055	0/0:20,0:20:60.20:0,60,958	0/0:30,0:30:87.30:0,87,1391	0/0:29,0:29:87.28:0,87,1368	0/0:11,0:11:30.08:0,30,454
chr10	2694559	.	T	TGATA	1352	PASS	AC=12;AF=0.240;AN=50;BaseQRankSum=2.407;DP=526;FS=0.000;HRun=0;HaplotypeScore=81.6030;InbreedingCoeff=0.8832;MQ=58.20;MQ0=27;MQRankSum=-3.518;QD=9.73;ReadPosRankSum=-1.040;VQSLOD=1.8204;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:21:3.47:26,3,0	0/0:10,0:10:18.05:0,18,256	./.	./.	0/0:29,0:29:39.06:0,39,522	0/0:23,0:21:39.12:0,39,559	./.	0/0:28,0:26:2.90:0,3,16	0/0:14,0:14:18.06:0,18,277	0/0:30,0:30:39.12:0,39,565	1/1:16,9:25:21.07:492,21,0	0/0:10,0:10:11.25:0,11,146	0/0:16,0:16:36.12:0,36,555	0/0:11,0:11:12.02:0,12,160	0/0:20,0:20:33.11:0,33,507	0/0:13,0:13:27.08:0,27,388	0/0:22,0:22:33.11:0,33,508	0/0:15,0:14:12.03:0,12,185	0/0:19,0:12:15.04:0,15,211	0/0:26,0:26:36.12:0,36,545	1/1:5,9:15:12.04:281,12,0	0/0:15,0:15:21.07:0,21,317	0/0:20,0:20:21.07:0,21,323	0/0:16,0:16:18.06:0,18,270	0/0:19,0:18:21.07:0,21,319	1/1:19,0:19:26.84:261,27,0	1/1:34,0:32:18.03:255,18,0	1/1:24,0:12:12.04:207,12,0
chr10	2694605	.	A	ATAGATAGACAGT	3122.98	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-5.094;DP=524;FS=2.314;HRun=0;HaplotypeScore=154.2616;InbreedingCoeff=0.9730;MQ=61.97;MQ0=10;MQRankSum=-2.161;QD=38.56;ReadPosRankSum=-1.663;VQSLOD=3.3336;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:17.78:0,18,302	0/0:14,0:14:39.12:0,39,864	0/0:20,0:15:42.14:0,42,726	0/0:13,0:7:18.06:0,18,310	0/0:26,0:26:75.19:0,75,1574	0/0:17,0:17:51.16:0,51,1438	0/0:6,0:6:18.05:0,18,270	0/0:36,0:36:84.04:0,84,1215	0/0:15,0:15:45.14:0,45,1076	0/0:26,0:26:68.35:0,68,1693	0/0:19,0:19:40.37:0,40,500	0/0:11,0:11:30.10:0,30,675	0/0:23,0:23:66.23:0,66,1803	0/0:11,0:11:30.08:0,30,621	0/0:12,0:12:36.12:0,36,1296	0/0:19,0:19:54.17:0,54,1356	0/0:21,0:21:44.22:0,44,1368	0/0:13,0:13:32.77:0,33,739	0/0:19,0:19:43.96:0,44,937	0/0:22,0:22:66.20:0,66,1508	0/0:13,0:13:23.90:0,24,272	0/0:14,0:14:42.13:0,42,1061	0/0:22,0:22:60.20:0,60,1380	0/0:13,0:13:39.10:0,39,872	0/0:16,0:16:45.15:0,45,1096	1/1:0,14:22:66.17:1704,66,0	1/1:0,27:32:12.04:758,12,0	1/1:4,14:21:15.05:798,15,0
chr10	2694852	.	GTCTATCTA	G	2349.19	PASS	AB=0.795;AC=9;AF=0.161;AN=56;BaseQRankSum=6.553;DP=619;FS=3.295;HRun=0;HaplotypeScore=171.9055;InbreedingCoeff=0.5562;MQ=62.85;MQ0=4;MQRankSum=-7.648;QD=15.56;ReadPosRankSum=0.254;VQSLOD=3.0810;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:17,0:23:4.50:4,0,81	0/0:10,0:10:24.08:0,24,879	0/0:19,0:16:12.04:0,12,178	0/0:12,0:12:6.02:0,6,88	0/0:26,0:26:45.15:0,45,1654	0/0:23,0:22:54.17:0,54,1955	0/0:16,0:16:27.08:0,27,839	0/0:46,0:46:56.72:0,57,844	0/0:20,0:20:39.13:0,39,1286	0/0:31,0:32:60.19:0,60,2240	0/0:25,0:25:39.12:0,39,1192	0/0:4,0:13:21.07:0,21,612	0/0:14,0:14:30.09:0,30,1052	0/0:17,0:17:36.12:0,36,1340	1/1:4,0:23:15.05:266,15,0	0/0:17,0:17:39.13:0,39,1593	0/0:6,0:22:36.12:0,36,1221	0/0:26,0:26:63.69:0,64,2250	0/0:14,0:14:9.03:0,9,372	0/0:31,0:32:60.19:0,60,2102	0/0:25,0:25:48.16:0,48,1859	0/0:5,0:15:20.98:0,21,192	0/0:17,0:26:23.98:0,24,198	0/0:9,1:16:21:0,21,357	1/1:4,0:24:3.01:56,3,0	0/1:15,20:35:24.91:1341,0,25	1/1:7,23:31:26.92:683,27,0	0/1:10,5:11:6.93:143,0,7
chr10	2695911	.	C	CA	2062.38	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=6.880;DP=634;FS=2.973;HRun=6;HaplotypeScore=68.2236;InbreedingCoeff=0.9994;MQ=86.24;MQ0=0;MQRankSum=-0.780;QD=28.64;ReadPosRankSum=1.488;VQSLOD=4.4842;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:78.18:0,78,796	0/0:16,0:16:48.08:0,48,476	0/0:22,0:22:45.13:0,45,527	0/0:25,0:26:39.11:0,39,453	0/0:29,0:29:78.17:0,78,796	0/0:23,0:23:63.14:0,63,642	0/0:18,0:18:54.12:0,54,551	0/0:27,0:27:66.12:0,66,663	0/0:23,0:23:63.13:0,63,636	0/0:28,0:28:78.16:0,78,790	0/0:25,0:24:72.16:0,72,735	0/0:19,0:19:42.09:0,42,428	0/0:34,0:34:93.19:0,93,941	0/0:25,0:25:66.14:0,66,673	0/0:27,0:27:78.16:0,78,789	0/0:28,0:28:78.17:0,78,796	0/0:23,0:23:66.13:0,66,666	0/0:18,0:18:54.06:0,54,531	0/0:18,0:18:51.07:0,51,509	0/0:24,0:24:60.12:0,60,605	0/0:20,0:20:60.13:0,60,606	0/0:16,0:16:45.10:0,45,458	0/0:21,0:21:57.11:0,57,574	0/0:10,0:10:27.04:0,27,266	0/0:14,0:14:42.08:0,42,422	1/1:3,19:22:32.55:696,33,0	1/1:4,33:38:84.27:1056,84,0	1/1:0,12:12:36.12:453,36,0
chr10	2696028	.	GC	G	2496.70	PASS	AB=0.923;AC=7;AF=0.125;AN=56;BaseQRankSum=9.656;DP=577;FS=1.002;HRun=1;HaplotypeScore=58.3578;InbreedingCoeff=0.8703;MQ=83.44;MQ0=0;MQRankSum=-0.625;QD=31.21;ReadPosRankSum=0.365;VQSLOD=3.2510;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:75.21:0,75,1148	0/0:11,0:11:33.11:0,33,527	0/0:21,0:21:22.66:0,23,623	0/1:11,0:12:3.55:4,0,307	0/0:30,0:30:90.31:0,90,1432	0/0:24,0:24:69.22:0,69,1074	0/0:16,0:16:48.16:0,48,767	0/0:29,0:29:84.28:0,84,1319	0/0:19,0:19:57.16:0,57,863	0/0:16,0:16:48.16:0,48,768	0/0:24,0:24:72.25:0,72,1145	0/0:16,0:16:48.15:0,48,742	0/0:29,0:29:87.30:0,87,1383	0/0:16,0:16:48.16:0,48,762	0/0:29,0:29:87.30:0,87,1387	0/0:14,0:14:39.13:0,39,623	0/0:21,0:21:63.21:0,63,1004	0/0:14,0:14:42.12:0,42,640	0/0:14,0:14:42.14:0,42,671	0/0:24,0:24:72.22:0,72,1119	0/0:22,0:22:66.20:0,66,1009	0/0:30,0:30:90.29:0,90,1411	0/0:28,0:28:81.22:0,81,1220	0/0:13,0:13:39.12:0,39,595	0/0:12,0:12:36.12:0,36,575	1/1:1,34:35:57.37:1377,57,0	1/1:0,29:29:78.26:1090,78,0	1/1:0,4:4:12.04:168,12,0
chr10	2696624	.	T	TGGGCATCGGAG	17405.51	PASS	AB=0.677;AC=11;AF=0.196;AN=56;BaseQRankSum=-5.785;DP=652;FS=6.802;HRun=0;HaplotypeScore=194.9388;InbreedingCoeff=0.8832;MQ=77.82;MQ0=0;MQRankSum=-15.872;QD=123.44;ReadPosRankSum=0.967;VQSLOD=4.6918;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:20,14:38:69.21:3443,69,0	0/0:16,0:16:48.15:0,48,1594	0/0:22,0:22:54.14:0,54,1595	0/0:15,0:15:39.10:0,39,1215	0/0:33,0:33:93.32:0,93,3280	0/0:19,0:19:54.19:0,54,1868	0/0:21,0:21:60.21:0,60,2099	0/0:26,0:26:54.19:0,54,1764	0/0:14,0:14:39.13:0,39,1374	0/0:34,0:34:93.30:0,93,3123	0/0:20,0:20:54.19:0,54,1861	0/0:21,0:21:54.18:0,54,1860	0/0:20,0:20:60.21:0,60,2117	0/0:20,0:20:54.17:0,54,1738	1/1:11,8:21:54.19:2691,54,0	0/0:21,0:21:57.20:0,57,1972	0/0:31,0:31:90.28:0,90,2910	0/0:26,0:26:62.35:0,62,2339	0/0:18,0:18:54.16:0,54,1620	0/0:25,0:25:69.21:0,69,2100	0/0:31,0:31:84.29:0,84,2944	0/0:31,0:31:93.27:0,93,3009	0/0:25,0:25:63.22:0,63,2172	0/0:22,0:22:63.22:0,63,2122	1/1:13,13:29:75.21:3889,75,0	0/1:11,8:21:99:2721,0,255	1/1:6,20:26:69.71:3887,70,0	1/1:1,4:5:15.05:775,15,0
chr10	2696627	.	G	GCA	1477.28	PASS	AB=0.925;AC=9;AF=0.161;AN=56;BaseQRankSum=14.429;DP=614;FS=0.429;HRun=0;HaplotypeScore=118.7895;InbreedingCoeff=0.5661;MQ=78.33;MQ0=0;MQRankSum=-13.868;QD=12.85;ReadPosRankSum=3.942;VQSLOD=3.6005;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:28,3:31:56.78:333,0,57	0/0:16,0:16:48.16:0,48,783	0/0:21,0:21:48.16:0,48,882	0/0:15,0:15:42.14:0,42,681	0/0:32,0:32:93.32:0,93,1511	0/0:18,0:18:54.18:0,54,881	0/0:20,0:20:60.20:0,60,979	0/0:22,0:22:54.18:0,54,881	0/0:16,0:16:45.15:0,45,725	0/0:34,0:34:99:0,99,1591	0/0:19,0:19:54.18:0,54,876	0/0:20,0:20:57.19:0,57,924	0/0:20,0:20:60.20:0,60,976	0/0:20,0:20:60.19:0,60,950	0/1:16,3:19:14.95:250,0,15	0/0:21,0:21:60.19:0,60,951	0/0:31,0:31:90.28:0,90,1437	0/0:24,0:24:72.25:0,72,1167	0/0:18,0:18:54.18:0,54,881	0/0:24,0:24:69.24:0,69,1115	0/0:30,0:30:87.30:0,87,1413	0/0:31,0:31:93.31:0,93,1494	0/0:24,0:24:66.23:0,66,1075	0/0:23,0:23:66.23:0,66,1073	1/1:16,4:20:12.74:343,13,0	0/1:15,0:15:99:144,0,179	1/1:25,1:25:65.44:493,65,0	1/1:4,0:4:6.17:65,6,0
chr10	2696628	.	T	TCGGAGGGGG	7870.67	PASS	AB=0.957;AC=10;AF=0.179;AN=56;BaseQRankSum=14.690;DP=610;FS=1.895;HRun=0;HaplotypeScore=178.2919;InbreedingCoeff=0.7486;MQ=77.74;MQ0=0;MQRankSum=-14.601;QD=67.85;ReadPosRankSum=2.791;VQSLOD=4.7904;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:29,2:32:25.84:1587,0,26	0/0:16,0:16:48.16:0,48,1516	0/0:20,0:20:57.14:0,57,1503	0/0:16,0:16:42.09:0,42,1178	0/0:32,0:32:96.31:0,96,3043	0/0:18,0:18:54.19:0,54,1759	0/0:20,0:20:60.21:0,60,1955	0/0:21,0:21:54.18:0,54,1717	0/0:16,0:16:48.12:0,48,1335	0/0:34,0:34:99:0,102,3028	0/0:19,0:19:54.19:0,54,1740	0/0:19,0:19:57.14:0,57,1737	0/0:20,0:20:60.21:0,60,1947	0/0:19,0:19:57.16:0,57,1685	1/1:16,3:19:51.17:1430,51,0	0/0:21,0:21:63.17:0,63,1827	0/0:30,0:30:90.26:0,90,2653	0/0:24,0:24:72.23:0,72,2226	0/0:17,0:17:51.17:0,51,1467	0/0:24,0:24:69.21:0,69,1976	0/0:30,0:30:87.28:0,87,2736	0/0:31,0:31:90.31:0,90,2775	0/0:24,0:24:66.21:0,66,2015	0/0:23,0:23:66.21:0,66,2002	1/1:16,3:20:55.07:1695,55,0	0/1:15,0:15:99:746,0,306	1/1:25,1:25:66.70:2044,67,0	1/1:4,0:4:12.04:369,12,0
chr10	2699315	.	AC	A	1163.10	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.811;DP=679;FS=1.479;HRun=1;HaplotypeScore=65.4854;InbreedingCoeff=0.9959;MQ=87.91;MQ0=0;MQRankSum=-4.213;QD=36.35;ReadPosRankSum=2.289;VQSLOD=4.0354;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,32:32:90.30:1258,90,0	0/0:16,0:16:48.16:0,48,767	0/0:27,0:27:77.46:0,77,1140	0/0:21,0:21:47.49:0,47,770	0/0:33,0:33:99:0,99,1580	0/0:22,0:22:66.23:0,66,1055	0/0:17,0:17:51.17:0,51,815	0/0:31,0:31:90.28:0,90,1375	0/0:27,0:27:81.28:0,81,1295	0/0:16,0:16:48.16:0,48,767	0/0:18,0:18:54.18:0,54,859	0/0:32,0:32:96.33:0,96,1532	0/0:28,0:28:84.27:0,84,1316	0/0:22,0:22:66.23:0,66,1055	0/0:26,0:25:78.27:0,78,1245	0/0:35,0:35:99:0,105,1676	0/0:17,0:17:51.16:0,51,791	0/0:9,0:9:24.08:0,24,380	0/0:26,0:26:75.21:0,75,1149	0/0:33,0:33:96.31:0,96,1502	0/0:15,0:15:42.14:0,42,671	0/0:25,0:25:75.26:0,75,1196	0/0:32,0:32:96.33:0,96,1533	0/0:21,0:21:63.21:0,63,1007	0/0:25,0:25:75.23:0,75,1165	0/0:29,0:29:84.27:0,84,1320	0/0:36,0:36:99:0,105,1639	0/0:8,0:8:24.08:0,24,384
chr10	2700240	.	CGT	C	1114.65	PASS	AB=0.900;AC=22;AF=0.393;AN=56;BaseQRankSum=9.106;DP=686;FS=4.254;HRun=0;HaplotypeScore=119.5775;InbreedingCoeff=-0.2266;MQ=69.07;MQ0=4;MQRankSum=0.824;QD=2.28;ReadPosRankSum=3.285;VQSLOD=1.4537;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:18,21:40:22.79:408,23,0	0/0:9,0:9:15.05:0,15,227	0/0:28,0:15:3.01:0,3,41	0/0:30,0:22:6.02:0,6,90	0/0:20,0:20:27.05:0,27,367	0/1:20,0:20:6.56:7,0,326	0/1:22,4:26:89.47:89,0,447	0/0:24,0:27:18.01:0,18,206	0/0:18,1:19:2.43:0,2,443	0/1:17,1:18:29.26:29,0,144	0/1:16,1:17:36.05:36,0,335	0/1:20,4:25:30.27:30,0,566	0/1:19,3:23:8.68:9,0,438	0/1:26,2:28:7.10:7,0,733	0/1:18,0:32:2.31:2,0,52	0/0:23,1:25:11.49:0,11,563	0/1:16,2:30:52.86:53,0,409	0/1:25,4:29:67.25:67,0,634	0/1:14,0:14:11.52:12,0,118	0/1:22,3:26:37.40:37,0,416	0/1:45,3:49:99:101,0,640	0/1:20,2:23:39.32:39,0,370	0/0:23,0:23:39.13:0,39,572	0/1:29,5:35:81.01:81,0,948	0/0:13,0:16:6.01:0,6,70	0/1:8,0:20:9.61:117,0,10	1/1:11,0:23:25.57:126,26,0	1/1:5,0:8:5.68:28,6,0
chr10	2700528	.	T	TTCAATCTA	3521.36	PASS	AB=0.920;AC=10;AF=0.179;AN=56;BaseQRankSum=0.912;DP=664;FS=1.284;HRun=0;HaplotypeScore=168.2670;InbreedingCoeff=0.4368;MQ=71.99;MQ0=4;MQRankSum=-2.020;QD=19.78;ReadPosRankSum=0.839;VQSLOD=2.7273;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:30:99:427,0,146	0/0:13,0:15:3.54:0,4,187	0/0:27,0:20:30.56:0,31,454	0/0:19,0:13:26.11:0,26,268	0/0:27,0:27:81.01:0,81,1248	0/0:15,0:15:42.03:0,42,703	0/0:19,0:19:46.23:0,46,460	0/0:30,0:30:77.75:0,78,693	0/0:26,0:26:75.08:0,75,1308	0/0:27,0:27:80.89:0,81,1239	0/0:19,0:19:57.04:0,57,864	0/0:30,0:30:84:0,84,1100	0/0:14,0:20:50.89:0,51,546	0/0:23,0:23:65.40:0,65,904	0/1:31,0:31:99:417,0,228	0/0:18,0:18:54.07:0,54,964	0/0:17,0:27:56.93:0,57,564	0/1:9,0:17:13.19:13,0,136	0/0:13,0:13:35.77:0,36,455	0/0:34,0:34:99:0,102,1837	0/0:23,0:23:69.12:0,69,1315	0/0:21,0:21:57.05:0,57,1221	0/0:20,0:35:25.39:0,25,441	0/0:18,0:18:51.05:0,51,975	0/1:29,0:29:99:281,0,371	1/1:6,22:29:51.02:1476,51,0	1/1:10,22:33:30.02:777,30,0	1/1:0,7:8:3.01:131,3,0
chr10	2700582	.	CTCTT	C	2399.23	PASS	AB=1.000;AC=10;AF=0.179;AN=56;BaseQRankSum=5.370;DP=608;FS=13.261;HRun=0;HaplotypeScore=106.2830;InbreedingCoeff=0.6877;MQ=59.74;MQ0=13;MQRankSum=-0.299;QD=17.02;ReadPosRankSum=3.162;VQSLOD=2.6960;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:26,4:30:15.08:893,15,0	0/0:9,0:9:18.06:0,18,364	0/0:24,0:14:36.95:0,37,649	0/0:15,0:9:9.28:0,9,353	0/0:18,0:18:43.38:0,43,796	0/0:21,0:21:57.19:0,57,1052	0/0:20,0:20:53.61:0,54,897	0/0:36,0:34:63.22:0,63,1170	0/0:23,0:23:54.18:0,54,1089	0/0:20,0:20:51.17:0,51,1066	0/0:19,0:19:45.15:0,45,911	0/0:22,0:22:60.17:0,60,1148	0/0:19,0:19:45.61:0,46,661	0/0:15,0:15:45.11:0,45,887	1/1:6,19:25:17.23:300,17,0	0/0:26,0:26:72.25:0,72,1409	0/0:20,0:21:29.06:0,29,479	0/0:17,0:17:36.12:0,36,666	0/0:19,0:18:39.13:0,39,735	0/0:28,0:27:63.22:0,63,1376	0/0:27,0:26:66.23:0,66,1378	0/0:22,0:22:63.17:0,63,1301	0/0:23,0:23:39.13:0,39,711	0/0:22,0:23:60.11:0,60,1199	1/1:8,25:33:15.05:261,15,0	0/1:15,0:15:68.68:309,0,69	0/1:32,0:32:21.05:578,0,21	1/1:6,0:6:3.33:217,3,0
chr10	2702473	.	TTGG	T	820	PASS	AB=0.962;AC=8;AF=0.143;AN=56;BaseQRankSum=6.890;DP=580;FS=9.280;HRun=0;HaplotypeScore=82.9330;InbreedingCoeff=0.5995;MQ=74.66;MQ0=5;MQRankSum=-0.051;QD=9.01;ReadPosRankSum=1.276;VQSLOD=2.3135;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:63.12:0,63,1074	0/0:9,0:9:21.07:0,21,358	0/1:32,0:21:9.03:9,0,175	0/0:24,0:20:2.40:0,2,165	0/0:18,0:18:12.04:0,12,221	0/0:30,0:30:4.83:0,5,669	0/0:18,0:18:32.17:0,32,657	0/0:21,0:21:9.01:0,9,139	0/0:12,0:12:24.06:0,24,424	0/0:22,0:22:24.08:0,24,444	0/0:12,0:12:6.02:0,6,120	0/0:23,0:23:48.62:0,49,876	0/0:20,0:20:33.22:0,33,671	0/0:26,0:26:63.22:0,63,1218	0/1:11,1:12:14.92:15,0,417	0/0:19,0:19:36.11:0,36,660	0/0:36,0:36:72.25:0,72,1368	0/0:15,0:15:29.56:0,30,509	0/0:18,0:18:21.07:0,21,415	0/0:18,0:18:18.53:0,19,360	0/0:49,0:47:28.70:0,29,1121	0/0:12,0:12:12.04:0,12,220	0/0:17,0:17:21.07:0,21,409	0/0:18,0:18:36.12:0,36,672	0/0:14,0:14:12.01:0,12,185	1/1:12,9:21:24.05:316,24,0	1/1:5,8:13:24.08:336,24,0	1/1:4,9:13:21.07:294,21,0
chr10	2702826	.	TTTTC	T	1000.62	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=7.485;DP=553;FS=0.524;HRun=0;HaplotypeScore=100.9836;InbreedingCoeff=0.9540;MQ=58.75;MQ0=14;MQRankSum=-4.129;QD=14.29;ReadPosRankSum=-1.838;VQSLOD=2.8549;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:23:44.76:280,45,0	0/0:12,0:12:32.99:0,33,543	0/0:22,0:10:6.21:0,6,127	0/0:16,0:10:20.39:0,20,207	0/0:21,0:21:48.78:0,49,663	0/0:19,0:19:41.30:0,41,623	0/0:19,0:19:56.85:0,57,865	0/0:34,0:33:76.37:0,76,1234	0/0:17,0:17:41.92:0,42,631	0/0:36,0:33:87.04:0,87,1311	0/0:20,0:20:50.54:0,51,829	0/0:13,0:13:24.60:0,25,373	0/0:12,0:12:31.95:0,32,356	0/0:14,0:14:29.99:0,30,523	0/0:19,0:19:50.78:0,51,603	0/0:18,0:18:47.67:0,48,650	0/0:27,0:26:59:0,59,1027	0/0:23,0:20:26.95:0,27,753	0/0:23,0:23:59.89:0,60,772	0/0:17,0:17:43.25:0,43,695	0/0:16,0:15:28.95:0,29,555	0/0:17,0:17:31.54:0,32,555	0/0:17,0:17:41.85:0,42,613	0/0:31,0:29:57.44:0,57,960	0/0:20,0:19:49.27:0,49,554	1/1:16,0:15:12:305,12,0	1/1:15,4:19:40.21:437,40,0	1/1:7,1:7:13.04:134,13,0
chr10	2702828	.	TTC	T	1175.40	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=7.356;DP=550;FS=8.532;HRun=0;HaplotypeScore=80.4679;InbreedingCoeff=0.8323;MQ=58.06;MQ0=15;MQRankSum=-6.380;QD=14.16;ReadPosRankSum=-3.621;VQSLOD=1.8653;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:9,18:23:47.91:553,48,0	0/0:12,0:12:32.92:0,33,380	0/0:21,0:9:4.81:0,5,102	0/0:15,0:10:17.17:0,17,130	0/0:21,0:21:29.84:0,30,410	0/0:18,0:18:26.86:0,27,408	0/0:21,0:21:55.19:0,55,603	0/0:34,0:33:63.07:0,63,811	0/0:16,0:16:41.59:0,42,432	0/0:35,0:32:62.90:0,63,865	0/0:21,0:21:42.70:0,43,564	0/1:12,0:12:9.86:10,0,224	0/0:12,0:12:31.91:0,32,276	0/0:13,0:13:32.52:0,33,349	0/0:19,0:19:50.32:0,50,434	0/0:18,0:18:44.21:0,44,429	0/0:27,0:26:23.96:0,24,617	0/0:23,0:20:26.37:0,26,452	0/0:21,0:21:58.84:0,59,563	0/0:18,0:18:44.72:0,45,487	0/0:16,0:15:24:0,24,372	0/0:18,0:17:27.93:0,28,356	0/0:16,0:16:39.83:0,40,436	0/0:31,0:29:56.48:0,56,607	0/0:20,0:19:49.65:0,50,421	1/1:17,0:16:19.66:302,20,0	1/1:18,1:19:40.27:372,40,0	1/1:8,0:7:10.79:99,11,0
chr10	2703654	.	C	CT	1101.03	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-7.619;DP=785;FS=2.241;HRun=7;HaplotypeScore=72.8842;InbreedingCoeff=0.9984;MQ=79.15;MQ0=0;MQRankSum=-3.639;QD=26.21;ReadPosRankSum=-0.477;VQSLOD=4.0507;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,40:42:99:1196,99,0	0/0:17,0:17:51.07:0,51,486	0/0:20,0:20:47.14:0,47,462	0/0:15,0:15:29.91:0,30,258	0/0:30,0:31:86.14:0,86,806	0/0:20,0:20:51.08:0,51,493	0/0:31,0:31:84.13:0,84,811	0/0:28,0:28:72.08:0,72,685	0/0:23,0:23:63.09:0,63,608	0/0:27,0:27:69.10:0,69,666	0/0:24,0:24:66.11:0,66,637	0/0:21,0:21:63.10:0,63,608	0/0:41,0:41:99:0,105,1014	0/0:29,0:29:75.11:0,75,719	0/0:40,0:40:99:0,114,1095	0/0:43,0:43:99:0,117,1124	0/0:26,0:26:72.12:0,72,695	0/0:14,0:14:39.06:0,39,377	0/0:27,0:27:66.10:0,66,637	0/0:30,0:30:87.14:0,87,840	0/0:33,0:33:96.09:0,96,902	0/0:24,0:24:63.10:0,63,608	0/0:34,0:34:96.13:0,96,916	0/0:37,0:37:99:0,102,977	0/0:32,0:32:81.12:0,81,782	0/0:28,0:28:78.13:0,78,753	0/0:39,0:39:99:0,108,1022	0/0:9,0:9:27.04:0,27,261
chr10	2704651	.	GA	G	2021.53	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=6.870;DP=704;FS=1.031;HRun=1;HaplotypeScore=69.9127;InbreedingCoeff=0.9995;MQ=82.13;MQ0=0;MQRankSum=-2.717;QD=24.65;ReadPosRankSum=-1.387;VQSLOD=3.2213;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:23,1:24:33.70:352,34,0	0/0:15,0:15:45.05:0,45,599	0/0:32,0:32:95.92:0,96,1269	0/0:20,1:21:33.56:0,34,511	0/0:29,0:29:81.14:0,81,1103	0/0:23,0:22:66.19:0,66,921	0/0:19,0:19:54.15:0,54,735	0/0:31,0:31:87.18:0,87,1124	0/0:24,0:24:72.22:0,72,1008	0/0:27,0:27:78.24:0,78,1063	0/0:23,0:23:69.21:0,69,946	0/0:29,0:29:87.21:0,87,1140	0/0:28,0:28:81.20:0,81,1107	0/0:36,0:36:99:0,108,1527	0/0:35,0:35:99:0,102,1435	0/0:30,0:30:87.25:0,87,1191	0/0:28,0:28:84.22:0,84,1156	0/0:14,0:14:42.12:0,42,580	0/0:26,0:26:77.83:0,78,1033	0/0:22,0:22:66.21:0,66,921	0/0:40,0:40:99:0,114,1553	0/0:24,0:24:69.20:0,69,948	0/0:11,0:11:33.09:0,33,453	0/0:33,0:33:99:0,99,1261	0/0:22,0:22:60.13:0,60,815	1/1:1,17:18:51.06:648,51,0	1/1:1,27:28:55.22:829,55,0	1/1:1,11:12:27.02:353,27,0
chr10	2707684	.	C	CTTTT	2360.33	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=10.244;DP=616;FS=2.194;HRun=9;HaplotypeScore=98.5073;InbreedingCoeff=0.9107;MQ=77.03;MQ0=0;MQRankSum=-5.033;QD=17.88;ReadPosRankSum=-0.952;VQSLOD=0.7808;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,0:12:6.02:115,6,0	0/0:12,0:12:9.02:0,9,386	0/0:20,0:20:36.05:0,36,498	0/0:14,0:13:5.10:0,5,212	0/0:34,0:34:71.96:0,72,951	0/0:26,0:26:66.15:0,66,925	0/0:18,0:18:45.08:0,45,611	0/0:29,0:29:75.08:0,75,1018	0/0:20,0:20:57.13:0,57,773	0/0:29,0:31:78.10:0,78,994	0/0:35,0:35:95.62:0,96,1308	0/0:25,0:25:63.07:0,63,858	0/0:30,0:30:69.03:0,69,916	0/0:13,0:13:39.11:0,39,530	1/1:6,1:21:21.07:332,21,0	0/0:26,0:26:63.14:0,63,921	1/1:4,0:15:3.01:57,3,0	0/0:15,0:15:42.10:0,42,583	0/0:15,0:15:39.12:0,39,544	0/0:29,0:29:73.06:0,73,1027	0/0:19,0:19:48.10:0,48,676	0/0:16,0:17:40.20:0,40,525	0/0:30,0:30:53.76:0,54,968	0/0:26,0:26:69.17:0,69,985	1/1:3,1:17:21.07:369,21,0	1/1:3,0:29:72.08:811,72,0	1/1:1,0:24:57.10:693,57,0	1/1:7,0:14:15:169,15,0
chr10	2707949	.	C	CTCCAT	6713.84	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=6.071;DP=521;FS=23.417;HRun=0;HaplotypeScore=117.0333;InbreedingCoeff=0.9040;MQ=80.86;MQ0=0;MQRankSum=-12.645;QD=54.58;ReadPosRankSum=1.179;VQSLOD=3.5694;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,14:20:45.11:1367,45,0	0/0:8,0:8:24.07:0,24,493	0/1:22,0:20:14.87:15,0,765	0/0:17,0:17:48.56:0,49,893	0/0:27,0:27:81.26:0,81,1721	0/0:28,0:28:84.27:0,84,1800	0/0:16,0:16:42.13:0,42,894	0/0:35,0:35:90.31:0,90,1927	0/0:12,0:12:36.12:0,36,768	0/0:22,0:22:66.23:0,66,1400	0/0:29,0:29:81.25:0,81,1722	0/0:17,0:17:48.16:0,48,1051	0/0:23,0:23:66.19:0,66,1368	0/0:15,0:15:45.15:0,45,986	1/1:1,14:15:42.14:1314,42,0	0/0:18,0:18:51.16:0,51,1074	1/1:2,7:11:17.67:579,18,0	0/0:13,0:13:36.12:0,36,803	0/0:19,0:19:57.15:0,57,1155	0/0:25,0:25:72.22:0,72,1520	0/0:11,0:11:33.11:0,33,736	0/0:16,0:16:48.15:0,48,1029	0/0:23,0:23:69.22:0,69,1454	0/0:24,0:24:72.25:0,72,1589	1/1:3,12:15:36.12:1122,36,0	1/1:4,0:20:57.15:1155,57,0	1/1:4,0:16:48.06:954,48,0	1/1:0,0:4:11.99:208,12,0
chr10	2707962	.	ATTTTT	A	3635.62	PASS	AB=0.564;AC=13;AF=0.232;AN=56;BaseQRankSum=11.871;DP=510;FS=22.822;HRun=10;HaplotypeScore=123.0362;InbreedingCoeff=0.8856;MQ=79.56;MQ0=0;MQRankSum=-10.992;QD=39.09;ReadPosRankSum=0.792;VQSLOD=0.4896;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,12:16:33.10:615,33,0	0/0:4,0:4:12.04:0,12,366	0/0:25,0:23:53.87:0,54,1008	0/0:23,0:21:36.86:0,37,925	0/0:30,0:30:81.27:0,81,2391	0/0:25,0:26:75.25:0,75,2186	0/0:13,0:13:36.12:0,36,1054	0/0:35,0:35:96.32:0,96,2766	0/0:12,0:12:33.09:0,33,915	0/0:21,0:21:60.21:0,60,1768	0/0:24,0:25:75.26:0,75,2230	0/0:16,0:16:45.14:0,45,1304	0/0:23,0:23:63.19:0,63,1787	0/0:19,0:19:57.20:0,57,1616	1/1:7,8:15:24.05:446,24,0	0/0:17,0:17:45.15:0,45,1350	1/1:5,5:10:11.75:221,12,0	0/0:13,0:13:39.13:0,39,1131	0/0:19,0:18:54.19:0,54,1602	0/0:23,0:23:66.23:0,66,1939	0/0:11,0:11:27.06:0,27,663	0/0:15,0:14:45.15:0,45,1302	0/0:21,0:22:60.21:0,60,1799	0/0:23,0:23:63.22:0,63,1860	1/1:3,7:10:21.05:390,21,0	0/1:5,17:22:40.33:847,0,40	1/1:1,11:12:36.12:668,36,0	1/1:0,8:8:24.08:449,24,0
chr10	2708163	.	GTTAATTCTT	G	7017.30	PASS	AB=0.538;AC=13;AF=0.232;AN=56;BaseQRankSum=13.960;DP=634;FS=24.478;HRun=0;HaplotypeScore=168.6847;InbreedingCoeff=0.8940;MQ=81.03;MQ0=0;MQRankSum=-13.386;QD=50.12;ReadPosRankSum=3.210;VQSLOD=3.0349;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,16:17:30.10:875,30,0	0/0:9,0:9:18.06:0,18,659	0/0:20,0:20:42.14:0,42,1671	0/0:15,0:15:35.89:0,36,1277	0/0:28,0:28:66.21:0,66,2971	0/0:27,0:27:72.25:0,72,3322	0/0:15,0:15:45.15:0,45,2051	0/0:27,0:27:66.14:0,66,2351	0/0:25,0:25:75.24:0,75,3292	0/0:30,0:30:72.24:0,72,3167	0/0:21,0:21:48.15:0,48,2148	0/0:21,0:21:54.18:0,54,2435	0/0:36,0:36:96.33:0,96,4452	0/0:16,0:16:45.15:0,45,1968	1/1:1,12:13:27.09:769,27,0	0/0:23,0:23:63.22:0,63,2915	1/1:5,18:23:15.05:417,15,0	0/0:28,0:28:75.20:0,75,3152	0/0:18,0:18:54.19:0,54,2485	0/0:45,0:45:99:0,117,5329	0/0:20,0:20:57.18:0,57,2512	0/0:18,0:18:45.15:0,45,1930	0/0:29,0:29:81.24:0,81,3462	0/0:23,0:23:60.20:0,60,2592	1/1:5,23:28:51.17:1488,51,0	0/1:4,24:28:69.49:1807,0,69	1/1:5,18:23:36.12:1049,36,0	1/1:1,7:8:21.07:612,21,0
chr10	2708484	.	C	CCCA	1101.05	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.645;DP=818;FS=1.806;HRun=0;HaplotypeScore=124.0488;InbreedingCoeff=0.9990;MQ=91.02;MQ0=0;MQRankSum=-6.981;QD=47.87;ReadPosRankSum=1.734;VQSLOD=5.9201;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,157,2876	0/0:9,0:9:27.09:0,27,503	0/0:36,0:36:96.27:0,96,1624	0/0:38,0:37:80.09:0,80,1702	0/0:27,0:27:81.26:0,81,1474	0/0:28,0:28:84.26:0,84,1503	0/0:18,0:18:54.19:0,54,1007	0/0:30,0:30:90.30:0,90,1647	0/0:32,0:32:93.32:0,93,1725	0/0:25,0:25:75.26:0,75,1399	0/0:22,0:22:66.23:0,66,1223	0/0:34,0:34:99:0,99,1833	0/0:29,0:29:87.30:0,87,1614	0/0:35,0:35:99:0,105,1913	0/0:37,0:37:99:0,111,2049	0/0:51,0:51:99:0,154,2776	1/1:1,22:23:60.21:1196,60,0	0/0:26,0:26:78.25:0,78,1421	0/0:20,0:20:60.19:0,60,1081	0/0:28,0:28:84.29:0,84,1566	0/0:44,0:44:99:0,132,2341	0/0:27,0:27:81.28:0,81,1502	0/0:23,0:23:69.22:0,69,1246	0/0:36,0:36:99:0,108,1944	0/0:17,0:17:48.16:0,48,895	0/0:31,0:31:90.31:0,90,1662	0/0:24,0:24:72.25:0,72,1342	0/0:16,0:16:48.13:0,48,830
chr10	2708486	.	T	TCA	381.71	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.979;DP=820;FS=0.810;HRun=0;HaplotypeScore=108.3420;InbreedingCoeff=0.9990;MQ=91.49;MQ0=0;MQRankSum=-6.428;QD=16.60;ReadPosRankSum=1.200;VQSLOD=3.8341;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,154,2496	0/0:10,0:10:27.08:0,27,417	0/0:36,0:37:72.79:0,73,1365	0/0:39,0:38:90.99:0,91,1448	0/0:25,0:25:75.24:0,75,1199	0/0:28,0:28:84.27:0,84,1346	0/0:18,0:18:54.18:0,54,881	0/0:29,0:29:87.30:0,87,1416	0/0:33,0:33:96.33:0,96,1558	0/0:26,0:26:78.26:0,78,1251	0/0:22,0:22:66.21:0,66,1053	0/0:35,0:35:99:0,105,1683	0/0:31,0:31:87.30:0,87,1414	0/0:35,0:35:99:0,105,1674	0/0:39,0:39:99:0,114,1812	0/0:49,0:49:99:0,148,2399	1/1:1,22:23:59.81:477,60,0	0/0:26,0:26:75.26:0,75,1223	0/0:19,0:19:57.19:0,57,908	0/0:29,0:29:84.29:0,84,1370	0/0:42,0:42:99:0,126,2023	0/0:27,0:27:81.28:0,81,1319	0/0:24,0:24:69.24:0,69,1126	0/0:36,0:36:99:0,108,1762	0/0:17,0:17:51.17:0,51,820	0/0:30,0:30:90.31:0,90,1463	0/0:24,0:24:72.25:0,72,1169	0/0:16,0:16:48.16:0,48,783
chr10	2708487	.	GC	G	77.99	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=8.050;DP=823;FS=0.000;HRun=1;HaplotypeScore=93.2170;InbreedingCoeff=0.9989;MQ=91.79;MQ0=0;MQRankSum=-6.303;QD=3.25;ReadPosRankSum=0.607;VQSLOD=-0.1970;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,154,2441	0/0:9,0:9:27.09:0,27,429	0/0:38,0:38:98.99:0,99,1504	0/0:38,0:38:89.30:0,89,1388	0/0:24,0:24:72.25:0,72,1151	0/0:29,0:29:87.28:0,87,1361	0/0:18,0:18:54.18:0,54,863	0/0:30,0:30:90.29:0,90,1392	0/0:33,0:33:99:0,99,1557	0/0:26,0:26:78.27:0,78,1247	0/0:21,0:21:63.21:0,63,1007	0/0:35,0:35:99:0,105,1665	0/0:31,0:31:93.27:0,93,1433	0/0:34,0:34:99:0,102,1627	0/0:39,0:39:99:0,117,1855	0/0:49,0:49:99:0,148,2343	1/1:2,22:24:36.56:173,37,0	0/0:26,0:26:78.27:0,78,1241	0/0:18,0:18:54.18:0,54,863	0/0:29,0:29:87.30:0,87,1389	0/0:44,0:44:99:0,129,2009	0/0:27,0:27:81.28:0,81,1295	0/0:24,0:24:72.23:0,72,1127	0/0:38,0:38:98.41:0,98,1734	0/0:17,0:17:51.17:0,51,810	0/0:30,0:30:90.30:0,90,1405	0/0:24,0:24:72.25:0,72,1151	0/0:16,0:16:48.16:0,48,767
chr10	2709635	.	GT	G	719.78	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.835;DP=511;FS=0.521;HRun=10;HaplotypeScore=52.7567;InbreedingCoeff=0.8863;MQ=72.10;MQ0=0;MQRankSum=0.462;QD=11.25;ReadPosRankSum=-0.945;VQSLOD=2.4307;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,0:24:38.70:114,39,0	0/0:7,0:7:21.02:0,21,220	0/0:10,0:10:8.35:0,8,58	0/0:8,0:8:1.48:0,1,53	0/0:24,2:26:14.09:0,14,612	0/0:23,0:23:60.16:0,60,663	0/0:10,0:10:24.05:0,24,258	1/1:6,23:29:62.94:539,63,0	0/0:16,0:16:42.10:0,42,457	0/0:23,2:25:17.07:0,17,637	0/0:25,0:25:66.14:0,66,711	0/0:14,1:15:13.05:0,13,372	0/0:14,0:14:39.09:0,39,416	0/0:15,0:15:36.08:0,36,389	0/0:15,0:16:44.95:0,45,472	0/0:21,1:23:33.93:0,34,569	1/1:1,10:11:23.99:208,24,0	0/0:17,1:18:47.92:0,48,480	0/0:16,0:16:48.12:0,48,523	0/0:17,0:17:43.91:0,44,454	0/0:11,0:12:32.92:0,33,346	0/0:24,0:24:66.16:0,66,721	0/0:10,0:12:32.74:0,33,318	0/0:11,0:11:27.01:0,27,276	0/0:26,1:28:46.02:0,46,719	0/0:25,1:25:37.11:0,37,623	0/0:31,2:35:69.83:0,70,936	0/0:14,0:15:41.91:0,42,433
chr10	2710267	.	CA	C	918	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.976;DP=751;FS=2.596;HRun=2;HaplotypeScore=77.1653;InbreedingCoeff=0.9842;MQ=74.97;MQ0=0;MQRankSum=-0.514;QD=32.79;ReadPosRankSum=1.518;VQSLOD=3.7977;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,163,2424	0/0:11,0:11:33.11:0,33,495	0/0:34,0:34:96.30:0,96,1393	0/0:16,0:16:45.15:0,45,639	0/0:28,0:28:84.26:0,84,1220	0/0:26,0:26:78.22:0,78,1144	0/0:28,0:28:84.28:0,84,1256	0/0:27,0:27:78.26:0,78,1169	0/0:21,0:21:57.19:0,57,846	0/0:32,0:32:96.32:0,96,1419	0/0:24,0:24:69.23:0,69,1031	0/0:33,0:33:99:0,99,1482	0/0:25,0:25:72.22:0,72,1037	0/0:35,0:35:99:0,105,1572	0/0:23,0:23:63.21:0,63,944	0/0:37,0:37:99:0,111,1664	1/1:0,28:28:78.25:1013,78,0	0/0:24,0:24:69.71:0,70,1035	0/0:19,0:19:57.19:0,57,849	0/0:21,0:21:60.20:0,60,898	0/0:40,0:40:99:0,120,1795	0/0:32,0:32:96.33:0,96,1439	0/0:24,0:24:72.24:0,72,1075	0/0:27,0:27:81.24:0,81,1187	0/0:20,0:20:60.19:0,60,880	0/0:27,0:27:81.27:0,81,1197	0/0:29,0:29:87.29:0,87,1302	0/0:5,0:5:15.05:0,15,225
chr10	2710472	.	CACTCCTTG	C	9129.90	PASS	AB=0.595;AC=13;AF=0.232;AN=56;BaseQRankSum=16.009;DP=756;FS=9.065;HRun=0;HaplotypeScore=206.7298;InbreedingCoeff=0.8971;MQ=76.70;MQ0=0;MQRankSum=-16.941;QD=49.62;ReadPosRankSum=0.634;VQSLOD=3.8414;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,33:42:75.73:1807,76,0	0/0:7,0:7:21.07:0,21,830	0/0:26,0:26:63.14:0,63,2136	0/0:17,0:17:19.25:0,19,599	0/0:25,0:25:69.24:0,69,2864	0/0:28,0:28:78.27:0,78,3169	0/0:33,0:33:75.24:0,75,3041	0/0:20,0:20:48.16:0,48,2051	0/0:26,0:26:63.22:0,63,2677	0/0:35,0:35:90.30:0,90,3550	0/0:18,0:18:45.15:0,45,1920	0/0:32,0:32:90.31:0,90,3753	0/0:25,0:25:72.25:0,72,2848	0/0:49,0:49:99:0,135,5703	1/1:8,30:38:84.29:2059,84,0	0/0:32,0:32:81.28:0,81,3351	1/1:11,14:25:31.15:864,31,0	0/0:26,0:26:75.26:0,75,2993	0/0:20,0:20:51.18:0,51,2124	0/0:23,0:23:54.19:0,54,2248	0/0:35,0:35:99:0,99,4163	0/0:29,0:29:84.29:0,84,3415	0/0:27,0:27:78.27:0,78,3233	0/0:39,0:39:99:0,114,4748	1/1:4,16:20:42.14:1053,42,0	0/1:8,17:25:74.02:1307,0,74	1/1:2,22:24:57.19:1478,57,0	1/1:3,7:10:21.07:561,21,0
chr10	2710913	.	T	TGGTCTTCA	11400.69	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=6.294;DP=802;FS=7.377;HRun=0;HaplotypeScore=205.7192;InbreedingCoeff=0.9976;MQ=86.14;MQ0=0;MQRankSum=-15.000;QD=92.69;ReadPosRankSum=0.508;VQSLOD=4.6912;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,28:42:99:4151,103,0	0/0:10,0:10:30.10:0,30,878	0/0:29,0:29:18.66:0,19,1882	0/0:32,0:32:93.23:0,93,2144	0/0:25,0:25:69.20:0,69,2021	0/0:29,0:29:87.25:0,87,2297	0/0:25,0:25:75.21:0,75,1967	0/0:44,0:44:99:0,126,3645	0/0:38,0:38:99:0,114,3244	0/0:41,0:41:99:0,120,3421	0/0:18,0:18:54.19:0,54,1522	0/0:35,0:35:99:0,105,2956	0/0:27,0:27:75.23:0,75,1976	0/0:36,0:36:99:0,102,2920	1/1:7,22:31:75.26:3106,75,0	0/0:41,0:41:99:0,117,3316	1/1:6,22:30:54.19:2370,54,0	0/0:20,0:20:60.21:0,60,1751	0/0:24,0:24:72.23:0,72,1930	0/0:31,0:31:90.29:0,90,2511	0/0:35,0:35:99:0,105,2659	0/0:30,0:30:84.28:0,84,2357	0/0:16,0:16:48.16:0,48,1326	0/0:27,0:27:81.23:0,81,2243	1/1:3,15:20:42.14:1774,42,0	0/0:28,0:28:84.28:0,84,2379	0/0:29,0:29:81.25:0,81,2138	0/0:9,0:9:27.09:0,27,735
chr10	2710981	.	AAG	A	4110.52	PASS	AB=0.548;AC=7;AF=0.125;AN=56;BaseQRankSum=12.538;DP=859;FS=8.022;HRun=0;HaplotypeScore=109.9179;InbreedingCoeff=0.8367;MQ=81.61;MQ0=1;MQRankSum=-2.769;QD=37.71;ReadPosRankSum=3.066;VQSLOD=5.5663;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,36:38:99:1433,99,0	0/0:13,0:13:39.11:0,39,696	0/0:22,0:22:60.19:0,60,1045	0/0:26,0:26:68.94:0,69,1205	0/0:25,0:25:69.21:0,69,1229	0/0:23,0:23:69.24:0,69,1292	0/0:41,0:41:99:0,114,2125	0/0:31,0:31:87.29:0,87,1592	0/0:33,0:33:99:0,99,1835	0/0:41,0:41:99:0,114,2106	0/0:25,0:25:72.25:0,72,1341	0/0:39,0:39:99:0,117,2143	0/0:44,0:44:99:0,126,2348	0/0:38,0:38:99:0,108,1988	0/0:38,0:38:96.33:0,96,1797	0/0:34,0:34:96.32:0,96,1767	0/0:36,0:36:87.30:0,87,1627	0/0:20,0:20:54.11:0,54,940	0/0:31,0:31:90.31:0,90,1676	0/0:27,0:27:75.21:0,75,1309	0/0:54,0:54:99:0,163,2972	0/0:21,0:21:60.19:0,60,1079	0/0:24,0:24:72.25:0,72,1348	0/0:41,0:41:99:0,123,2180	0/0:23,0:23:57.18:0,57,1035	0/1:4,19:23:49.25:734,0,49	1/1:0,34:33:90.30:1325,90,0	1/1:0,14:14:42.14:618,42,0
chr10	2712082	.	A	AT	1970.96	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-10.774;DP=590;FS=10.370;HRun=6;HaplotypeScore=52.6124;InbreedingCoeff=0.9785;MQ=78.86;MQ0=0;MQRankSum=-0.496;QD=32.85;ReadPosRankSum=-0.015;VQSLOD=3.1829;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:29:71.11:0,71,689	0/0:4,0:4:9.02:0,9,92	0/0:14,0:14:28.74:0,29,323	0/0:16,0:15:27.04:0,27,267	0/0:29,0:29:81.18:0,81,826	0/0:20,0:20:54.12:0,54,551	0/0:18,0:18:45.10:0,45,459	0/0:25,0:25:66.13:0,66,663	0/0:22,0:22:66.14:0,66,667	0/0:22,0:22:63.13:0,63,638	0/0:13,0:13:33.07:0,33,337	0/0:32,0:32:90.20:0,90,918	0/0:25,0:25:69.16:0,69,704	0/0:25,0:25:75.17:0,75,765	0/0:29,0:29:87.20:0,87,887	0/0:27,0:27:78.15:0,78,783	0/0:21,0:21:63.14:0,63,643	0/0:15,0:15:42.06:0,42,417	0/0:20,0:20:50.99:0,51,492	0/0:22,0:22:63.14:0,63,642	0/0:17,0:17:42.09:0,42,428	0/0:24,0:24:72.16:0,72,735	0/0:23,0:23:57.12:0,57,581	0/0:11,0:11:30.07:0,30,306	0/0:27,0:27:69.13:0,69,692	1/1:1,15:16:45.14:566,45,0	1/1:2,31:33:93.30:1170,93,0	1/1:1,10:11:30.10:377,30,0
chr10	2713609	.	C	CA	2236.97	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-10.591;DP=635;FS=1.012;HRun=6;HaplotypeScore=59.4692;InbreedingCoeff=0.9219;MQ=65.77;MQ0=0;MQRankSum=-0.984;QD=28.32;ReadPosRankSum=2.257;VQSLOD=4.3570;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:63.14:0,63,642	0/0:15,0:15:36.07:0,36,361	0/0:5,0:4:9:0,9,84	0/0:5,0:5:2.34:0,2,8	0/0:40,0:40:99:0,99,1009	0/0:26,0:26:75.16:0,75,760	0/0:11,0:11:30.07:0,30,306	0/0:31,0:31:75.15:0,75,757	0/0:11,0:11:30.07:0,30,306	0/0:35,0:35:96.22:0,96,979	0/0:30,0:30:84.19:0,84,857	0/0:20,0:20:57.11:0,57,574	0/0:26,0:26:75.13:0,75,750	0/0:24,0:24:63.14:0,63,642	0/0:31,0:31:84.17:0,84,850	0/0:16,0:15:42.08:0,42,421	0/0:20,0:20:54.12:0,54,550	0/0:22,0:22:63.11:0,63,633	0/0:19,0:19:51.08:0,51,507	0/0:34,0:34:93.19:0,93,941	0/0:13,0:13:33.07:0,33,337	0/0:31,0:31:87.18:0,87,880	0/0:35,0:35:90.19:0,90,911	0/0:13,0:13:36.08:0,36,367	0/0:19,0:19:57.12:0,57,575	1/1:4,27:31:26.03:945,26,0	1/1:5,32:37:81.03:1019,81,0	1/1:0,11:11:33.11:415,33,0
chr10	2715271	.	A	ACAT	3146.18	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=5.192;DP=552;FS=3.042;HRun=0;HaplotypeScore=84.3902;InbreedingCoeff=0.8744;MQ=65.64;MQ0=0;MQRankSum=-3.841;QD=14.70;ReadPosRankSum=-1.406;VQSLOD=2.9095;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:14:6.01:82,6,0	0/0:8,0:8:18.03:0,18,211	0/0:16,0:15:3:0,3,25	0/1:15,0:14:0.82:1,0,24	0/0:24,0:24:38.99:0,39,420	0/0:14,0:15:36.06:0,36,432	0/0:9,0:9:15.02:0,15,170	0/0:39,0:39:42.02:0,42,377	0/0:14,0:14:30.07:0,30,372	0/0:35,0:35:66.15:0,66,781	0/0:18,0:18:27.05:0,27,317	1/1:10,11:21:24.08:455,24,0	1/1:14,16:30:21.06:374,21,0	1/1:5,14:19:18.06:349,18,0	1/1:21,0:21:24.08:347,24,0	0/0:21,0:21:33.06:0,33,408	1/1:11,0:11:4.48:59,4,0	0/0:19,0:19:29.96:0,30,334	0/0:12,0:12:12.03:0,12,149	0/0:18,0:18:42.08:0,42,489	0/0:10,0:10:15.05:0,15,201	0/0:28,0:28:51.11:0,51,611	0/0:34,0:34:69.16:0,69,850	0/0:18,0:18:33.05:0,33,441	1/1:21,0:21:36.12:530,36,0	1/1:26,0:26:57.09:717,57,0	1/1:23,0:23:23.97:307,24,0	1/1:13,0:13:9.03:133,9,0
chr10	2715305	.	C	CATCATT	5268.74	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=-1.397;DP=545;FS=5.434;HRun=0;HaplotypeScore=101.5723;InbreedingCoeff=0.6855;MQ=63.60;MQ0=2;MQRankSum=-4.290;QD=25.58;ReadPosRankSum=4.654;VQSLOD=4.0130;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:10,0:10:25.09:206,25,0	0/0:8,0:8:21.03:0,21,360	0/0:12,0:8:4.34:0,4,103	0/0:7,0:9:4.76:0,5,90	0/0:24,0:24:71.98:0,72,1024	0/0:21,0:21:60.06:0,60,961	0/0:16,0:16:48.01:0,48,576	0/0:34,0:34:99:0,99,1100	0/0:14,0:14:42.01:0,42,704	0/0:30,0:30:87.21:0,87,1500	0/0:20,0:20:51.03:0,51,704	0/1:18,0:18:62.41:62,0,77	0/1:26,0:26:48.72:49,0,83	0/1:22,0:22:46.16:46,0,114	1/1:1,16:19:24.06:763,24,0	0/0:17,0:17:51.09:0,51,883	1/1:3,0:13:9.83:196,10,0	0/0:20,0:20:18.07:0,18,602	0/0:14,0:13:32.98:0,33,455	0/0:27,0:27:78.04:0,78,1049	0/0:8,0:8:24.04:0,24,432	0/0:23,0:23:66.11:0,66,1135	0/0:28,0:28:81.17:0,81,1510	0/0:14,0:14:39.11:0,39,836	1/1:0,21:24:36.12:1259,36,0	1/1:3,27:32:59.03:1601,59,0	1/1:3,22:30:24.08:765,24,0	1/1:0,8:12:9.03:321,9,0
chr10	2715449	.	GGT	G	695.20	PASS	AB=0.962;AC=4;AF=0.071;AN=56;BaseQRankSum=6.858;DP=727;FS=2.639;HRun=0;HaplotypeScore=103.5463;InbreedingCoeff=0.4870;MQ=57.86;MQ0=7;MQRankSum=0.116;QD=7.72;ReadPosRankSum=-1.154;VQSLOD=3.2060;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,27:31:60.04:776,60,0	0/0:6,0:6:18.06:0,18,269	0/0:33,0:13:30.10:0,30,454	0/1:39,1:11:6.08:6,0,62	0/0:27,0:27:69.23:0,69,1129	0/0:29,0:29:73.13:0,73,1211	0/0:24,0:24:63.22:0,63,1068	0/0:36,0:36:93.31:0,93,1534	0/0:31,0:31:75.34:0,75,1401	0/0:22,0:22:36.25:0,36,950	0/0:21,0:21:48.16:0,48,793	0/0:23,0:23:54.18:0,54,909	0/0:25,0:25:66.22:0,66,1093	0/0:31,0:31:84.29:0,84,1398	0/0:21,0:21:56.93:0,57,922	0/0:35,0:35:78.25:0,78,1294	0/0:30,0:30:67.13:0,67,1201	0/0:28,0:28:72.03:0,72,1180	0/0:23,0:21:54.18:0,54,887	0/0:15,0:15:36.12:0,36,572	0/0:56,0:56:99:0,126,2104	0/0:18,0:18:51.15:0,51,815	0/0:22,0:22:29.44:0,29,807	0/0:39,0:39:99:0,101,1653	0/0:16,0:16:39.09:0,39,657	0/1:17,1:17:23.14:23,0,646	0/0:18,0:18:54.17:0,54,888	0/0:8,0:8:18.06:0,18,297
chr10	2715476	.	GGT	G	879.21	PASS	AB=0.926;AC=19;AF=0.365;AN=52;BaseQRankSum=3.412;DP=789;FS=0.000;HRun=0;HaplotypeScore=120.4812;InbreedingCoeff=-0.4568;MQ=53.27;MQ0=27;MQRankSum=-0.162;QD=1.62;ReadPosRankSum=-1.824;VQSLOD=2.1024;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:31,6:40:37.89:341,38,0	0/1:6,0:7:34.80:35,0,77	./.	./.	0/1:22,2:25:63.48:63,0,193	0/1:28,3:32:29.33:29,0,241	0/1:27,4:30:38.38:38,0,276	0/1:32,0:31:19.51:20,0,66	0/1:28,2:31:38.42:38,0,231	0/0:27,0:27:3.98:0,4,459	0/1:10,1:12:16.78:27,0,17	0/1:27,1:28:22.10:22,0,360	0/1:25,5:31:32.38:32,0,324	0/1:28,5:32:34.80:35,0,283	0/0:21,0:26:11.73:0,12,99	0/0:25,0:25:21.01:0,21,268	0/1:31,0:31:60.19:60,0,362	0/1:26,3:31:42.54:43,0,505	0/1:21,1:21:35.96:36,0,39	0/1:18,0:16:14.34:14,0,199	0/1:67,0:67:21.42:21,0,278	0/0:19,0:19:9.02:0,9,110	0/1:18,1:19:14.67:15,0,182	0/1:42,8:49:99:163,0,560	0/0:12,0:13:7.83:0,8,61	0/0:16,0:15:6.01:0,6,72	0/0:19,0:19:9.01:0,9,86	0/0:9,0:9:9.01:0,9,86
chr10	2715518	.	T	TGA	484.41	PASS	AB=0.776;AC=6;AF=0.107;AN=56;BaseQRankSum=-0.231;DP=685;FS=0.784;HRun=0;HaplotypeScore=124.9540;InbreedingCoeff=0.5909;MQ=73.12;MQ0=13;MQRankSum=0.541;QD=10.09;ReadPosRankSum=-2.236;VQSLOD=3.0047;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:44:86.24:0,86,685	0/0:6,0:6:15.01:0,15,166	0/0:45,0:28:80.59:0,81,754	0/0:44,0:25:65.71:0,66,636	0/0:20,0:19:22.52:0,23,389	0/0:23,0:23:48.44:0,48,507	0/0:27,0:26:60.04:0,60,639	0/0:27,0:26:72.01:0,72,656	0/0:25,0:25:56.97:0,57,540	0/0:25,0:25:69.11:0,69,794	0/1:10,0:10:0.45:0,0,173	0/0:20,0:20:48.06:0,48,556	0/0:23,0:23:31.45:0,31,490	0/0:22,0:22:51.01:0,51,520	0/0:27,0:26:39.85:0,40,350	0/0:32,0:32:83.87:0,84,762	0/0:30,0:29:80.64:0,81,819	0/0:28,0:28:52.55:0,53,750	0/0:15,0:15:38.99:0,39,362	0/0:13,0:12:36.02:0,36,394	0/0:46,0:46:92.77:0,93,826	0/0:11,0:11:26.99:0,27,261	0/0:19,0:19:54:0,54,541	0/0:44,0:43:99:0,102,1080	0/0:19,0:18:18.41:0,18,152	0/1:3,13:16:9.86:305,0,10	1/1:3,13:16:3:112,3,0	1/1:6,0:6:8.76:178,9,0
chr10	2716586	.	G	GA	1348.57	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-6.112;DP=693;FS=0.596;HRun=6;HaplotypeScore=63.6468;InbreedingCoeff=0.9590;MQ=79.49;MQ0=0;MQRankSum=-1.321;QD=31.36;ReadPosRankSum=0.243;VQSLOD=4.0456;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,108,1102	0/0:10,0:10:27.06:0,27,275	0/0:17,0:17:36.07:0,36,357	0/0:24,0:25:67.68:0,68,661	0/0:22,0:22:60.12:0,60,605	0/0:22,0:22:63.12:0,63,635	0/0:28,0:28:66.12:0,66,666	0/0:27,0:27:72.14:0,72,724	0/0:20,0:20:57.12:0,57,575	1/1:3,21:24:66.21:829,66,0	1/1:2,17:19:51.16:642,51,0	0/0:25,0:25:72.16:0,72,735	0/0:24,0:24:66.13:0,66,667	0/0:27,0:27:75.17:0,75,764	0/0:31,0:31:75.17:0,75,765	0/0:33,0:33:96.22:0,96,979	0/0:27,0:27:78.14:0,78,781	0/0:26,0:25:72.16:0,72,735	0/0:25,0:25:60.12:0,60,607	0/0:29,0:29:78.18:0,78,795	0/0:35,0:35:93.21:0,93,949	0/0:18,0:18:51.11:0,51,520	0/0:20,0:20:51.11:0,51,520	0/0:30,0:30:84.19:0,84,857	0/0:28,0:28:75.16:0,75,765	0/0:18,1:19:7.34:0,7,385	0/0:27,0:27:81.16:0,81,813	0/0:15,0:15:45.10:0,45,459
chr10	2716813	.	G	GA	1755.30	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=10.141;DP=751;FS=6.625;HRun=2;HaplotypeScore=72.9805;InbreedingCoeff=0.9999;MQ=83.90;MQ0=0;MQRankSum=-3.255;QD=31.34;ReadPosRankSum=0.797;VQSLOD=2.9892;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:87.27:0,87,1079	0/0:17,0:17:45.13:0,45,544	0/0:24,0:24:66.20:0,66,806	0/0:21,0:21:48.10:0,48,551	0/0:28,0:28:81.23:0,81,990	0/0:29,0:29:84.21:0,84,1012	0/0:23,0:23:69.20:0,69,842	0/0:29,0:29:72.22:0,72,889	0/0:28,0:28:81.24:0,81,992	0/0:26,0:26:75.21:0,75,914	0/0:22,0:22:66.17:0,66,790	0/0:26,0:26:72.23:0,72,893	0/0:27,0:27:69.22:0,69,854	0/0:32,0:32:90.28:0,90,1115	1/1:3,38:41:96.28:1332,96,0	0/0:27,0:27:78.24:0,78,967	0/0:27,0:27:78.23:0,78,953	0/0:23,0:23:63.20:0,63,781	0/0:19,0:19:54.16:0,54,658	0/0:36,0:36:99:0,105,1301	0/0:39,0:39:99:0,114,1413	0/0:21,0:21:63.20:0,63,780	0/0:27,0:27:78.23:0,78,954	0/0:15,0:15:45.14:0,45,558	1/1:0,15:15:39.13:545,39,0	0/0:35,0:35:99:0,105,1302	0/0:37,0:37:99:0,108,1323	0/0:26,0:26:78.25:0,78,966
chr10	2721809	.	AG	A	566.99	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.499;DP=648;FS=3.319;HRun=2;HaplotypeScore=57.1917;InbreedingCoeff=0.9974;MQ=83.30;MQ0=0;MQRankSum=-4.085;QD=29.84;ReadPosRankSum=1.926;VQSLOD=3.2977;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,18:19:51.17:662,51,0	0/0:9,0:9:24.08:0,24,360	0/0:24,0:24:63.21:0,63,942	0/0:14,0:14:42.14:0,42,591	0/0:43,0:43:99:0,126,1868	0/0:27,0:27:78.23:0,78,1128	0/0:15,0:15:45.15:0,45,674	0/0:31,0:31:93.26:0,93,1298	0/0:17,0:17:51.16:0,51,743	0/0:33,0:33:99:0,99,1481	0/0:18,0:18:48.15:0,48,697	0/0:25,0:25:75.24:0,75,1088	0/0:30,0:30:90.30:0,90,1346	0/0:18,0:18:54.18:0,54,806	0/0:25,0:25:72.24:0,72,1079	0/0:23,0:23:63.21:0,63,944	0/0:24,0:24:72.23:0,72,1058	0/0:27,0:27:81.25:0,81,1191	0/0:19,0:19:54.17:0,54,770	0/0:25,0:25:75.25:0,75,1121	0/0:13,0:13:39.13:0,39,585	0/0:21,0:21:63.20:0,63,921	0/0:28,0:28:81.27:0,81,1210	0/0:23,0:23:69.23:0,69,1034	0/0:23,0:23:66.21:0,66,953	0/0:26,0:26:78.26:0,78,1151	0/0:38,0:38:99:0,108,1584	0/0:10,0:10:30.10:0,30,449
chr10	2722101	.	GTGT	G	1127.02	PASS	AB=0.918;AC=13;AF=0.241;AN=54;BaseQRankSum=9.983;DP=784;FS=4.291;HRun=0;HaplotypeScore=114.8264;InbreedingCoeff=0.4378;MQ=75.18;MQ0=6;MQRankSum=-2.988;QD=4.51;ReadPosRankSum=-0.439;VQSLOD=2.4131;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:20,24:44:5.66:704,6,0	0/0:11,0:15:24.04:0,24,317	0/0:35,0:28:0:0,0,0	./.	0/0:35,0:34:42.14:0,42,781	0/1:19,1:20:9.04:9,0,480	0/0:23,0:23:37.33:0,37,597	0/0:29,0:29:9.03:0,9,129	0/0:27,1:28:15.03:0,15,899	0/0:28,0:28:33.10:0,33,599	0/0:18,0:18:12.03:0,12,190	0/0:31,0:31:51.17:0,51,958	0/0:34,1:35:18.04:0,18,957	0/1:32,3:35:18.07:18,0,962	1/1:16,0:39:44.57:309,45,0	0/0:36,0:36:54.17:0,54,997	1/1:14,0:18:14.88:105,15,0	0/1:28,5:33:10.92:11,0,738	0/1:26,0:25:17.90:18,0,322	0/0:17,0:17:24.08:0,24,448	0/0:41,1:42:18.01:0,18,943	0/0:19,0:19:27.09:0,27,497	0/0:18,0:18:21.07:0,21,400	0/0:38,0:39:68.25:0,68,1228	1/1:18,0:23:8.93:63,9,0	0/0:26,0:26:30.06:0,30,527	0/0:26,0:26:36.12:0,36,672	0/1:9,2:11:54.20:54,0,288
chr10	2726973	.	G	GCCAC	2525.60	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-8.116;DP=557;FS=12.563;HRun=0;HaplotypeScore=95.5938;InbreedingCoeff=0.9257;MQ=91.07;MQ0=0;MQRankSum=-2.901;QD=54.90;ReadPosRankSum=0.925;VQSLOD=4.1912;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,147,2655	0/0:5,0:5:12.04:0,12,218	0/0:22,0:22:60.17:0,60,972	0/0:22,0:22:60.20:0,60,1045	0/0:12,0:12:36.12:0,36,653	0/0:20,0:20:51.17:0,51,928	0/0:32,0:32:93.30:0,93,1645	0/0:22,0:22:57.19:0,57,1006	0/0:22,0:22:60.21:0,60,1090	0/0:15,0:15:45.15:0,45,792	0/0:7,0:7:15.04:0,15,243	0/0:22,0:22:63.20:0,63,1115	0/0:24,0:24:66.20:0,66,1140	0/0:20,0:20:54.17:0,54,951	0/0:25,0:25:63.21:0,63,1132	0/0:14,0:14:42.14:0,42,753	0/0:22,0:22:63.22:0,63,1138	0/0:24,0:24:69.18:0,69,1188	0/0:16,0:16:39.12:0,39,647	0/0:16,0:16:48.16:0,48,854	0/0:33,0:33:96.30:0,96,1687	0/0:2,0:2:6.02:0,6,109	0/0:15,0:15:39.13:0,39,709	0/0:38,0:38:99:0,108,1885	0/0:9,0:9:21.07:0,21,382	1/1:2,19:21:57.17:1435,57,0	1/1:4,13:18:38.85:992,39,0	1/1:1,5:7:9.03:235,9,0
chr10	2728070	.	C	CA	769.08	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-3.144;DP=709;FS=2.575;HRun=7;HaplotypeScore=73.1483;InbreedingCoeff=0.9644;MQ=67.81;MQ0=0;MQRankSum=-0.366;QD=26.52;ReadPosRankSum=0.542;VQSLOD=4.3883;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:96.17:0,96,962	0/0:13,0:13:33.07:0,33,337	0/0:15,0:15:30.53:0,31,299	0/0:22,0:19:19.80:0,20,295	0/0:36,0:36:96.19:0,96,972	0/0:25,0:25:72.15:0,72,727	0/0:16,0:16:39.08:0,39,397	0/0:25,0:25:63.12:0,63,636	0/0:23,0:23:66.15:0,66,672	0/0:35,0:35:81.14:0,81,826	0/0:24,0:24:66.15:0,66,673	0/0:24,0:24:60.12:0,60,612	0/0:24,0:24:66.15:0,66,672	0/0:34,0:34:90.20:0,90,918	0/0:31,0:31:87.06:0,87,859	0/0:26,0:26:72.16:0,72,734	1/1:3,26:29:69.22:864,69,0	0/0:25,0:24:53.51:0,54,518	0/0:25,0:25:51.30:0,51,655	0/0:20,0:20:54.10:0,54,542	0/0:31,0:31:90.20:0,90,917	0/0:22,0:22:63.14:0,63,641	0/0:32,0:32:75.15:0,75,764	0/0:26,0:26:75.17:0,75,762	0/0:25,0:25:72.16:0,72,734	0/0:32,0:32:90.20:0,90,918	0/0:27,0:27:78.16:0,78,788	0/0:6,0:6:12.02:0,12,122
chr10	2729003	.	G	GTCTAATTA	2238.77	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.095;DP=761;FS=7.234;HRun=0;HaplotypeScore=184.5630;InbreedingCoeff=0.9900;MQ=76.86;MQ0=1;MQRankSum=-6.753;QD=77.20;ReadPosRankSum=-2.498;VQSLOD=2.4609;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,16:29:63.22:2334,63,0	0/0:13,0:13:39.13:0,39,1114	0/0:17,0:17:45.12:0,45,1002	0/0:18,0:18:19.39:0,19,1076	0/0:39,0:39:99:0,117,3112	0/0:26,0:26:78.27:0,78,2225	0/0:25,0:25:72.25:0,72,2052	0/0:32,0:32:93.29:0,93,2392	0/0:26,0:26:72.21:0,72,1878	0/0:40,0:40:99:0,120,3237	0/0:30,0:30:90.30:0,90,2492	0/0:29,0:29:84.20:0,84,2265	0/0:28,0:28:75.24:0,75,1968	0/0:33,0:33:87.26:0,87,2274	0/0:43,0:43:99:0,126,3556	0/0:31,0:31:93.32:0,93,2620	0/0:34,0:34:96.33:0,96,2716	0/0:7,0:7:21.07:0,21,603	0/0:23,0:23:66.22:0,66,1767	0/0:26,0:26:72.19:0,72,1808	0/0:29,0:28:78.27:0,78,2201	0/0:33,0:33:96.19:0,96,2540	0/0:26,0:26:78.25:0,78,2045	0/0:20,0:20:60.21:0,60,1667	0/0:23,0:23:69.17:0,69,1902	0/0:30,0:30:90.31:0,90,2541	0/0:38,0:38:99:0,111,3034	0/0:13,0:13:39.13:0,39,1113
chr10	2729693	.	T	TGC	2621.30	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.147;DP=761;FS=5.479;HRun=0;HaplotypeScore=88.0315;InbreedingCoeff=0.9837;MQ=86.12;MQ0=0;MQRankSum=-4.456;QD=48.54;ReadPosRankSum=2.266;VQSLOD=4.9481;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,51:54:99:2716,135,0	0/0:5,0:5:15.05:0,15,241	0/0:32,0:31:90.28:0,90,1403	0/0:22,0:22:54.13:0,54,841	0/0:36,0:36:99:0,105,1689	0/0:17,0:17:51.17:0,51,832	0/0:18,0:18:51.17:0,51,832	0/0:31,0:31:90.29:0,90,1419	0/0:31,0:31:87.30:0,87,1412	0/0:33,0:33:99:0,99,1593	0/0:22,0:22:66.23:0,66,1077	0/0:29,0:29:87.30:0,87,1417	0/0:41,0:41:99:0,123,1931	0/0:24,0:24:69.24:0,69,1126	0/0:45,0:45:99:0,132,2128	0/0:29,0:29:84.29:0,84,1366	0/0:30,0:30:90.31:0,90,1469	0/0:11,0:11:30.10:0,30,480	0/0:26,0:26:75.22:0,75,1160	0/0:38,0:38:99:0,114,1860	0/0:28,0:28:84.27:0,84,1334	0/0:17,0:17:51.16:0,51,807	0/0:15,0:15:45.15:0,45,734	0/0:19,0:19:57.19:0,57,927	0/0:33,0:33:99:0,99,1616	0/0:32,0:32:93.31:0,93,1488	0/0:32,0:31:90.31:0,90,1468	0/0:11,0:11:33.11:0,33,538
chr10	2733568	.	CGT	C	1110.66	PASS	AB=0.913;AC=11;AF=0.196;AN=56;BaseQRankSum=4.598;DP=678;FS=1.831;HRun=0;HaplotypeScore=115.2461;InbreedingCoeff=0.1425;MQ=67.34;MQ0=6;MQRankSum=3.118;QD=5.00;ReadPosRankSum=0.033;VQSLOD=2.4216;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:35:20.37:0,20,168	0/0:7,0:7:12.04:0,12,184	0/0:36,0:16:6.02:0,6,90	0/0:44,0:23:26.98:0,27,302	1/1:6,16:23:43.60:456,44,0	0/1:21,3:25:56.89:57,0,715	0/0:20,2:22:3.79:0,4,528	1/1:21,18:39:51.14:590,51,0	0/1:14,1:15:5.23:5,0,395	0/0:23,1:24:24.86:0,25,834	0/0:19,2:21:0.78:0,1,485	0/0:23,0:23:54.15:0,54,817	0/0:23,3:26:15.83:0,16,715	0/0:22,1:23:12.80:0,13,646	0/0:9,0:22:32.75:0,33,290	0/1:23,2:25:22.52:23,0,610	0/0:8,0:20:14.47:0,14,98	0/0:16,0:16:36.12:0,36,559	0/0:21,0:21:24.08:0,24,379	0/1:27,3:31:62.81:63,0,649	0/1:16,2:18:34.56:35,0,434	0/1:15,1:16:5.24:5,0,393	0/1:25,2:30:28.93:29,0,801	0/0:15,2:17:3.79:0,4,527	0/0:14,0:30:38.99:0,39,341	0/0:28,0:33:52.20:0,52,564	0/0:14,0:25:29.92:0,30,272	0/0:2,0:6:6:0,6,52
chr10	2735216	.	CA	C	2461.82	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=11.880;DP=569;FS=5.050;HRun=4;HaplotypeScore=59.0079;InbreedingCoeff=0.9968;MQ=81.00;MQ0=0;MQRankSum=-2.089;QD=30.77;ReadPosRankSum=2.507;VQSLOD=4.0383;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,16:16:39.12:468,39,0	0/0:8,0:8:24.05:0,24,316	0/0:28,0:27:33.61:0,34,643	0/0:22,0:21:32.31:0,32,419	0/0:31,0:31:87.28:0,87,1200	0/0:25,0:25:75.25:0,75,1049	0/0:18,0:18:51.15:0,51,695	0/0:29,0:29:84.27:0,84,1175	0/0:20,0:20:60.19:0,60,822	0/0:18,0:18:48.16:0,48,671	0/0:21,0:21:54.16:0,54,738	0/0:12,0:12:30.10:0,30,420	0/0:17,0:17:48.16:0,48,672	0/0:13,0:13:39.12:0,39,528	0/0:30,0:30:75.22:0,75,1030	0/0:16,0:16:45.14:0,45,611	0/0:23,0:23:66.21:0,66,899	0/0:13,0:13:36.08:0,36,481	0/0:15,0:15:42.12:0,42,568	0/0:32,0:32:90.25:0,90,1191	0/0:7,0:7:21.07:0,21,293	0/0:30,0:30:78.25:0,78,1070	0/0:20,0:20:54.18:0,54,753	0/0:18,0:18:51.13:0,51,691	0/0:23,0:23:63.21:0,63,876	1/1:0,26:26:78.24:936,78,0	1/1:1,29:30:81.25:970,81,0	1/1:0,8:8:21.06:248,21,0
chr10	2735551	.	CAGA	C	1432.72	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.458;DP=534;FS=2.286;HRun=0;HaplotypeScore=81.9065;InbreedingCoeff=0.9902;MQ=74.94;MQ0=0;MQRankSum=-1.502;QD=37.70;ReadPosRankSum=1.519;VQSLOD=4.2507;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:60.14:0,60,1290	0/0:6,0:6:18.06:0,18,402	0/0:11,0:11:30.10:0,30,651	0/0:16,0:16:42.14:0,42,904	0/0:39,0:39:99:0,105,2301	0/0:21,0:21:60.19:0,60,1298	0/0:14,0:14:42.14:0,42,937	0/0:34,0:34:87.29:0,87,1906	0/0:14,0:14:42.14:0,42,938	0/0:22,0:22:60.21:0,60,1341	0/0:13,0:13:33.10:0,33,695	0/0:16,0:16:45.13:0,45,961	0/0:28,0:28:81.20:0,81,1688	0/0:20,0:20:57.20:0,57,1252	1/1:1,15:16:39.06:606,39,0	0/0:16,0:16:47.75:0,48,1014	0/0:17,0:17:51.17:0,51,1113	0/0:16,0:16:42.14:0,42,930	0/0:25,0:24:69.23:0,69,1455	0/0:29,0:29:87.27:0,87,1842	0/0:10,0:10:27.09:0,27,603	0/0:20,0:20:60.21:0,60,1340	0/0:23,0:23:60.18:0,60,1283	0/0:6,0:6:18.04:0,18,359	1/1:1,21:22:60.14:948,60,0	0/0:27,0:27:75.26:0,75,1676	0/0:22,0:22:60.21:0,60,1340	0/0:9,0:9:27.05:0,27,529
chr10	2736721	.	CAA	C	4053.22	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=13.157;DP=701;FS=6.935;HRun=2;HaplotypeScore=86.6867;InbreedingCoeff=0.9587;MQ=86.52;MQ0=1;MQRankSum=-5.074;QD=44.54;ReadPosRankSum=1.596;VQSLOD=3.1877;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,37:36:99:1610,99,0	0/0:14,0:14:42.13:0,42,817	0/0:30,0:30:84.25:0,84,1621	0/0:23,0:23:63.20:0,63,1235	0/0:39,0:39:99:0,111,2124	0/0:24,0:24:72.14:0,72,1343	0/0:19,0:19:57.20:0,57,1123	0/0:28,0:28:84.27:0,84,1574	0/0:28,0:28:84.26:0,84,1635	0/0:30,0:30:90.30:0,90,1796	0/0:22,0:22:66.23:0,66,1329	0/0:36,0:36:99:0,108,2140	0/0:34,0:34:99:0,102,1933	0/0:13,0:13:39.13:0,39,758	0/0:43,0:43:99:0,129,2585	0/0:33,0:33:99:0,99,1975	0/0:18,0:18:54.19:0,54,1069	0/0:15,0:15:45.12:0,45,874	0/0:17,0:17:51.16:0,51,942	0/0:29,0:29:87.28:0,87,1730	0/0:20,0:20:60.15:0,60,1123	0/0:26,0:26:78.23:0,78,1468	0/0:31,0:31:93.31:0,93,1854	0/0:14,0:14:42.11:0,42,765	0/0:24,0:24:72.24:0,72,1430	1/1:0,21:21:63:952,63,0	1/1:0,24:24:72.25:1171,72,0	1/1:1,8:9:4.22:320,4,0
chr10	2737203	.	CTCCTCCTCCTCCTCT	C	200.75	PASS	AB=1.000;AC=9;AF=0.167;AN=54;BaseQRankSum=2.027;DP=491;FS=39.893;HRun=0;HaplotypeScore=177.4353;InbreedingCoeff=0.3702;MQ=73.19;MQ0=14;MQRankSum=-1.193;QD=1.88;ReadPosRankSum=-1.451;VQSLOD=0.9675;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,25:34:12.04:187,12,0	./.	0/0:21,0:13:2.80:0,3,7	0/0:20,0:15:9.05:0,9,78	0/0:16,0:14:24.08:0,24,932	0/0:19,0:19:17.60:0,18,973	0/0:13,0:13:26.86:0,27,617	0/0:29,0:29:41.40:0,41,746	0/0:8,0:8:9.03:0,9,210	0/0:21,0:20:17.89:0,18,711	0/0:22,0:22:30.07:0,30,1420	0/0:14,0:14:8.92:0,9,292	0/0:15,0:14:14.94:0,15,588	0/0:17,0:16:27.09:0,27,1531	1/1:8,0:8:3.47:26,3,0	0/0:15,0:15:20.28:0,20,688	0/1:9,0:8:29.44:29,0,42	0/0:5,0:5:6.02:0,6,131	0/0:16,0:14:11.99:0,12,313	0/0:19,0:18:21.05:0,21,715	0/0:58,0:56:99:0,117,4646	0/0:16,0:15:18.06:0,18,990	0/0:19,0:18:9.03:0,9,457	0/1:29,0:28:4.77:5,0,2020	1/1:9,0:9:2.96:26,3,0	0/1:17,0:16:48.69:59,0,49	0/0:3,0:3:2.98:0,3,21	0/0:13,0:13:6.02:0,6,184
chr10	2737212	.	CTCCTCT	C	846.10	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=5.551;DP=449;FS=5.371;HRun=0;HaplotypeScore=87.1380;InbreedingCoeff=0.6062;MQ=60.80;MQ0=19;MQRankSum=-2.311;QD=5.92;ReadPosRankSum=-2.694;VQSLOD=1.0292;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:27:8.92:74,9,0	1/1:4,0:4:2.94:18,3,0	0/0:18,0:7:2.80:0,3,7	0/0:14,0:7:9.08:0,9,78	0/0:17,0:15:27.06:0,27,536	0/0:19,0:19:22.76:0,23,539	0/0:13,0:13:32.46:0,32,410	0/1:27,0:27:99:113,0,188	0/0:7,0:7:2.07:0,2,147	0/0:22,0:22:32.86:0,33,494	0/0:21,0:21:39.02:0,39,733	0/0:16,0:14:20.27:0,20,224	0/0:12,0:11:17.73:0,18,355	0/0:15,0:14:30.70:0,31,749	1/1:6,0:5:8.99:77,9,0	0/0:17,0:17:30.04:0,30,513	1/1:11,0:10:18.64:300,19,0	0/1:6,0:6:23.97:24,0,97	0/0:15,0:12:23.85:0,24,264	0/0:14,0:13:23.71:0,24,323	0/0:56,0:54:99:0,125,2434	0/0:14,0:13:24.05:0,24,449	0/0:15,0:14:14.99:0,15,254	0/1:26,0:25:5.03:5,0,1035	1/1:7,0:7:7.76:74,8,0	1/1:5,10:14:23.99:237,24,0	1/1:1,0:1:3.01:64,3,0	1/1:11,0:10:5.95:44,6,0
chr10	2737218	.	TTCC	T	514.06	PASS	AB=1.000;AC=10;AF=0.200;AN=50;BaseQRankSum=6.156;DP=373;FS=1.918;HRun=0;HaplotypeScore=55.7084;InbreedingCoeff=0.5080;MQ=56.30;MQ0=24;MQRankSum=-3.719;QD=8.43;ReadPosRankSum=-0.429;VQSLOD=2.2526;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:27:4.80:0,5,24	0/0:2,0:2:3.01:0,3,46	./.	./.	0/0:14,0:13:27.08:0,27,435	0/0:11,0:11:12.41:0,12,374	0/0:12,0:12:12.04:0,12,218	1/1:9,16:24:45.10:569,45,0	0/1:7,0:7:15.44:15,0,137	0/0:13,0:12:27.09:0,27,502	0/0:15,0:15:36.12:0,36,636	0/0:10,0:8:12.04:0,12,205	0/0:11,0:9:21.07:0,21,341	0/0:12,0:11:33.03:0,33,520	./.	0/0:16,0:16:37.75:0,38,498	1/1:11,0:9:1.46:21,1,0	0/1:6,0:6:8.65:9,0,59	0/0:15,0:12:21.01:0,21,282	0/0:10,0:9:20.42:0,20,279	0/0:51,0:49:99:0,102,1557	0/0:13,0:11:27.09:0,27,492	0/0:9,0:8:11.87:0,12,160	0/0:20,0:19:33.11:0,33,613	0/0:7,0:7:0.94:0,1,2	1/1:11,0:10:5.09:16,5,0	1/1:1,0:1:2.92:17,3,0	0/0:6,0:5:0.46:0,0,1
chr10	2737221	.	CTCCT	C	41.28	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=4.175;DP=371;FS=3.680;HRun=0;HaplotypeScore=62.6070;InbreedingCoeff=0.4689;MQ=54.56;MQ0=26;MQRankSum=-4.000;QD=2.58;ReadPosRankSum=2.131;VQSLOD=1.1226;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:27:11.71:0,12,148	0/0:2,0:2:6.02:0,6,111	0/0:10,0:1:0.47:0,0,1	0/0:19,0:7:7.83:0,8,66	0/0:17,0:16:45.15:0,45,999	0/0:12,0:12:27.08:0,27,675	0/0:10,0:10:27.08:0,27,542	0/0:25,0:24:54.37:0,54,415	0/0:7,0:7:17.89:0,18,347	0/0:12,0:11:30.09:0,30,798	0/0:14,0:14:42.14:0,42,1121	0/0:11,0:9:21.05:0,21,444	0/0:11,0:9:24.08:0,24,645	0/0:12,0:11:33.11:0,33,845	0/0:5,0:3:5.79:0,6,80	0/0:16,0:16:22.33:0,22,1019	1/1:6,4:8:12.26:126,12,0	0/1:6,0:6:8.81:9,0,194	0/0:13,0:10:30.08:0,30,640	0/0:12,0:11:27.08:0,27,616	0/0:51,0:49:99:0,132,3189	0/0:12,0:10:27.09:0,27,770	0/0:8,0:7:15.05:0,15,353	0/0:18,0:17:45.01:0,45,1093	0/0:7,0:7:13.29:0,13,174	0/0:11,0:10:16.29:0,16,194	0/0:2,0:2:4.83:0,5,53	0/0:9,0:8:15.05:0,15,212
chr10	2740073	.	G	GA	3068.79	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-12.874;DP=773;FS=14.890;HRun=7;HaplotypeScore=73.9649;InbreedingCoeff=0.9813;MQ=78.98;MQ0=0;MQRankSum=0.155;QD=28.15;ReadPosRankSum=-0.405;VQSLOD=2.6260;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,63:70:99:2146,155,0	0/0:16,0:16:42.06:0,42,405	0/0:16,0:14:20.10:0,20,188	0/0:23,1:24:29.34:0,29,370	0/0:23,0:23:57.08:0,57,550	0/0:35,0:35:93.10:0,93,886	0/0:25,0:25:75.10:0,75,713	1/1:8,30:39:93.17:1045,93,0	0/0:31,0:31:81.13:0,81,782	0/0:30,0:30:81.12:0,81,780	0/0:22,0:22:57.08:0,57,546	0/0:26,0:26:60.09:0,60,579	0/0:26,0:26:66.10:0,66,637	0/0:37,0:37:99:0,108,1043	0/0:35,0:35:99:0,99,950	0/0:30,0:30:87.09:0,87,819	0/0:25,0:25:72.10:0,72,689	0/0:11,0:11:33.05:0,33,318	0/0:18,0:18:42.53:0,43,406	0/0:25,0:25:69.11:0,69,666	0/0:38,0:38:99:0,114,1094	0/0:25,0:25:72.12:0,72,695	0/0:25,0:25:66.10:0,66,633	0/0:31,0:31:84.13:0,84,811	0/0:19,0:19:51.06:0,51,487	0/0:31,0:31:84.12:0,84,807	0/0:36,0:35:99:0,105,1008	0/0:4,0:4:12.02:0,12,116
chr10	2741230	.	C	CT	2817.18	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-9.939;DP=567;FS=1.981;HRun=6;HaplotypeScore=63.2351;InbreedingCoeff=0.9658;MQ=67.50;MQ0=0;MQRankSum=-0.053;QD=29.97;ReadPosRankSum=3.212;VQSLOD=4.4290;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:87.15:0,87,875	0/0:7,0:7:18.04:0,18,184	0/0:25,0:23:39.12:0,39,510	0/0:20,0:18:19.91:0,20,296	0/0:18,0:18:54.12:0,54,551	0/0:27,0:27:75.17:0,75,765	0/0:13,0:13:39.07:0,39,391	0/0:19,0:19:48.07:0,48,477	0/0:19,0:19:54.12:0,54,551	0/0:27,0:27:78.15:0,78,781	0/0:21,0:21:63.14:0,63,643	0/0:10,0:10:24.04:0,24,238	0/0:19,0:19:54.11:0,54,544	0/0:13,0:13:36.08:0,36,367	0/0:19,0:19:57.11:0,57,570	0/0:20,0:20:48.06:0,48,469	1/1:5,19:24:6.02:672,6,0	0/0:14,0:14:39.04:0,39,387	0/0:22,0:22:63.13:0,63,637	0/0:20,0:20:57.13:0,57,581	0/0:18,0:18:45.07:0,45,446	0/0:24,0:24:66.13:0,66,666	0/0:16,0:16:48.10:0,48,484	0/0:20,0:20:57.13:0,57,582	0/0:30,0:30:90.21:0,90,918	1/1:4,14:17:42.13:525,42,0	1/1:2,36:37:99:1246,99,0	1/1:0,14:14:42.13:528,42,0
chr10	2741721	.	GA	G	1926.82	PASS	AB=0.530;AC=6;AF=0.107;AN=56;BaseQRankSum=8.872;DP=626;FS=5.702;HRun=2;HaplotypeScore=61.0398;InbreedingCoeff=0.6125;MQ=60.60;MQ0=8;MQRankSum=1.108;QD=31.08;ReadPosRankSum=1.330;VQSLOD=3.0915;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:75.19:0,75,1077	0/0:11,0:11:33.11:0,33,494	0/0:27,0:14:39.11:0,39,539	0/0:18,0:16:41.66:0,42,580	0/0:31,0:31:90.30:0,90,1348	0/0:38,0:38:99:0,114,1643	0/0:22,0:22:66.21:0,66,951	0/0:29,0:29:87.28:0,87,1269	0/0:18,0:18:54.17:0,54,789	0/0:34,0:34:99:0,99,1466	0/0:19,0:19:57.19:0,57,846	0/0:23,0:23:69.21:0,69,997	0/0:22,0:22:66.22:0,66,989	0/0:17,0:17:51.17:0,51,764	0/0:27,0:27:81.27:0,81,1213	0/0:16,0:16:48.15:0,48,700	0/1:2,14:16:44.42:461,0,44	0/0:25,0:25:47.17:0,47,982	0/0:23,0:15:45.15:0,45,674	0/0:32,0:32:93.32:0,93,1393	0/0:18,0:18:54.18:0,54,809	0/0:25,0:25:72.23:0,72,1059	0/0:24,0:24:72.24:0,72,1060	0/0:18,0:18:51.16:0,51,744	0/0:19,0:19:57.18:0,57,835	0/1:2,18:20:29.77:626,0,30	1/1:0,21:21:63.20:818,63,0	1/1:0,5:5:12.04:156,12,0
chr10	2742594	.	GA	G	577.49	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.885;DP=643;FS=17.106;HRun=7;HaplotypeScore=59.2290;InbreedingCoeff=0.9519;MQ=56.36;MQ0=11;MQRankSum=-6.603;QD=19.91;ReadPosRankSum=-3.173;VQSLOD=1.5351;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:55.87:0,56,875	0/0:9,0:9:24.07:0,24,290	0/0:13,0:5:15.05:0,15,188	0/0:12,0:7:15.05:0,15,184	0/0:24,0:24:72.22:0,72,893	0/0:27,0:27:78.19:0,78,931	0/0:21,0:20:54.16:0,54,666	1/1:3,26:25:66.15:672,66,0	0/0:14,0:13:36.11:0,36,442	0/0:25,0:25:72.21:0,72,879	0/0:28,0:27:75.24:0,75,943	0/0:25,0:25:69.19:0,69,833	0/0:31,0:31:87.26:0,87,1072	0/0:31,0:31:87.28:0,87,1090	0/0:27,0:27:78.25:0,78,981	0/0:29,0:29:81.26:0,81,1019	0/0:29,0:29:59.81:0,60,957	0/0:20,0:19:45.03:0,45,516	0/0:12,0:9:27.09:0,27,340	0/0:34,0:34:90.25:0,90,1084	0/0:21,0:21:60.19:0,60,755	0/0:26,0:26:78.24:0,78,968	0/0:38,0:38:99:0,102,1270	0/0:19,0:19:51.05:0,51,578	0/0:19,0:19:48.15:0,48,593	0/0:18,0:18:51.16:0,51,642	0/0:28,0:28:81.21:0,81,977	0/0:5,0:5:15.05:0,15,189
chr10	2742983	.	G	GCCCCACCTAGGAAT	6708.39	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-4.741;DP=701;FS=8.979;HRun=0;HaplotypeScore=267.7619;InbreedingCoeff=0.9910;MQ=62.77;MQ0=0;MQRankSum=-10.011;QD=129.01;ReadPosRankSum=0.756;VQSLOD=3.6777;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:61,0:61:99:0,181,7161	0/0:10,0:10:27.07:0,27,1025	0/0:23,0:22:58.07:0,58,1872	0/0:16,0:16:36.11:0,36,1229	0/0:29,0:29:87.28:0,87,3472	0/0:25,0:25:75.26:0,75,3075	0/0:20,0:20:57.16:0,57,2204	0/0:35,0:35:96.31:0,96,3621	0/0:22,0:22:60.20:0,60,2409	0/0:22,0:22:63.22:0,63,2470	0/0:22,0:22:60.16:0,60,2316	0/0:31,0:31:87.30:0,87,3489	0/0:22,0:22:66.23:0,66,2627	0/0:21,0:21:63.20:0,63,2494	1/1:9,19:39:81.28:5229,81,0	0/0:25,0:25:72.22:0,72,2767	0/0:30,0:30:87.28:0,87,3454	0/0:22,0:22:60.19:0,60,2059	0/0:19,0:18:51.16:0,51,1828	0/0:21,0:21:54.18:0,54,2165	0/0:35,0:35:96.32:0,96,3740	0/0:25,0:25:75.20:0,75,2731	0/0:24,0:24:69.20:0,69,2657	0/0:24,0:24:66.21:0,66,2655	1/1:7,4:13:30.10:1479,30,0	0/0:31,0:31:87.30:0,87,3438	0/0:29,0:29:87.25:0,87,3349	0/0:5,0:5:15.05:0,15,552
chr10	2744873	.	CA	C	3895.64	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=12.762;DP=564;FS=2.114;HRun=8;HaplotypeScore=54.0603;InbreedingCoeff=0.9537;MQ=80.02;MQ0=0;MQRankSum=-1.406;QD=22.39;ReadPosRankSum=0.551;VQSLOD=3.9577;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,11:15:1.23:180,1,0	0/0:7,0:7:18.03:0,18,203	0/0:20,0:20:36.09:0,36,412	0/0:15,0:15:38.91:0,39,420	0/0:23,0:23:57.17:0,57,686	0/0:32,0:32:84.25:0,84,1005	0/0:14,0:14:36.11:0,36,435	1/1:4,25:29:75.12:724,75,0	0/0:24,0:24:54.13:0,54,626	0/0:24,0:24:72.21:0,72,851	0/0:24,0:24:63.19:0,63,761	0/0:21,0:21:57.17:0,57,679	0/0:28,0:28:78.22:0,78,930	0/0:18,0:18:51.16:0,51,615	1/1:2,23:25:63.10:608,63,0	0/0:17,0:17:51.16:0,51,615	1/1:0,19:19:51.08:493,51,0	0/0:14,0:14:23.30:0,23,341	0/0:10,0:10:30.09:0,30,362	0/0:20,0:20:54.17:0,54,652	0/0:24,0:24:72.22:0,72,870	0/0:20,0:20:51.15:0,51,606	0/0:23,0:23:54.17:0,54,652	0/0:12,0:12:30.08:0,30,351	1/1:2,18:20:45.07:435,45,0	1/1:6,18:23:20.81:472,21,0	1/1:3,31:34:90.14:869,90,0	1/1:0,8:8:12.02:115,12,0
chr10	2746269	.	ATTC	A	2032.82	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.398;DP=637;FS=2.729;HRun=0;HaplotypeScore=87.7857;InbreedingCoeff=0.9447;MQ=84.58;MQ0=0;MQRankSum=-1.187;QD=40.66;ReadPosRankSum=3.070;VQSLOD=4.9128;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:51.17:0,51,1113	0/0:6,0:6:18.06:0,18,375	0/0:22,0:22:51.16:0,51,1015	0/0:22,0:22:57.19:0,57,1172	0/0:19,0:19:57.20:0,57,1254	0/0:24,0:23:69.24:0,69,1479	0/0:21,0:21:60.21:0,60,1291	0/0:35,0:35:96.33:0,96,1961	0/0:22,0:22:57.20:0,57,1257	0/0:25,0:25:72.23:0,72,1508	0/0:26,0:26:78.27:0,78,1723	0/0:21,0:21:60.21:0,60,1280	0/0:26,0:26:78.26:0,78,1643	0/0:23,0:23:63.20:0,63,1312	1/1:1,27:28:66.23:1077,66,0	0/0:28,0:28:81.28:0,81,1777	0/0:27,0:27:81.26:0,81,1748	0/0:22,0:22:57.20:0,57,1213	0/0:18,0:18:54.19:0,54,1172	0/0:32,0:32:81.28:0,81,1794	0/0:19,0:19:57.20:0,57,1243	0/0:25,0:25:72.24:0,72,1553	0/0:27,0:27:81.28:0,81,1808	0/0:15,0:15:45.14:0,45,938	1/1:0,22:22:66.23:1077,66,0	0/0:19,0:19:57.19:0,57,1220	0/0:44,0:44:99:0,132,2930	0/0:2,0:2:6.02:0,6,134
chr10	2746850	.	GATTAGTTCTGC	G	3597.87	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.110;DP=703;FS=1.394;HRun=0;HaplotypeScore=218.8285;InbreedingCoeff=0.9481;MQ=86.22;MQ0=0;MQRankSum=-9.753;QD=97.24;ReadPosRankSum=1.820;VQSLOD=3.3460;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,129,6930	0/0:10,0:10:30.10:0,30,1652	0/0:18,0:18:48.16:0,48,1987	0/0:30,0:31:87.20:0,87,3192	0/0:31,0:31:84.29:0,84,4644	0/0:30,0:30:90.31:0,90,5022	0/0:26,0:26:75.23:0,75,3775	0/0:30,0:30:84.28:0,84,4449	0/0:32,0:32:90.31:0,90,4963	0/0:31,0:31:84.27:0,84,4214	0/0:16,0:16:45.15:0,45,2459	0/0:26,0:26:75.26:0,75,4078	0/0:30,0:30:87.28:0,87,4740	0/0:26,0:26:78.27:0,78,4295	1/1:0,21:21:60.21:2116,60,0	0/0:25,0:25:75.26:0,75,4210	0/0:31,0:31:87.30:0,87,4732	0/0:12,0:12:33.11:0,33,1715	0/0:28,0:28:69.24:0,69,3587	0/0:23,0:23:63.22:0,63,3208	0/0:34,0:34:96.33:0,96,5249	0/0:32,0:32:81.28:0,81,4537	0/0:17,0:17:51.16:0,51,2486	0/0:30,0:30:84.29:0,84,4687	1/1:1,15:16:42.14:1482,42,0	0/0:21,0:21:63.22:0,63,3489	0/0:30,0:30:90.31:0,90,4709	0/0:2,0:2:6.02:0,6,343
chr10	2747116	.	CTG	C	132.57	PASS	AB=0.973;AC=10;AF=0.185;AN=54;BaseQRankSum=1.413;DP=579;FS=0.000;HRun=0;HaplotypeScore=86.9299;InbreedingCoeff=-0.0877;MQ=65.86;MQ0=17;MQRankSum=1.103;QD=0.79;ReadPosRankSum=1.620;VQSLOD=1.3793;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:0.38:0,0,350	0/1:6,0:6:13.55:14,0,45	0/0:35,0:19:11.95:0,12,126	0/0:28,0:18:7.81:0,8,55	0/0:18,0:19:0.07:0,0,131	0/1:19,0:19:13.46:13,0,188	0/1:23,0:24:78.26:78,0,309	0/0:35,0:33:25.06:0,25,186	0/1:12,2:14:13.65:14,0,227	0/0:19,1:19:18.05:0,18,259	0/0:14,0:12:15.05:0,15,231	0/0:21,0:21:10.42:0,10,538	0/0:17,0:16:7.60:0,8,469	0/0:21,0:21:0.70:0,1,340	0/0:23,0:22:13.28:0,13,76	0/1:26,0:24:15.10:15,0,582	1/1:3,10:13:9.03:104,9,0	0/1:18,1:17:10.70:11,0,412	0/0:17,0:17:20.76:0,21,299	0/1:23,0:22:6.65:7,0,319	0/1:24,0:19:11.97:12,0,201	0/0:27,0:27:4.27:0,4,411	0/0:15,0:15:17.81:0,18,343	0/0:35,0:34:23.10:0,23,770	0/0:16,0:13:11.46:0,11,99	0/0:23,0:20:17.35:0,17,110	0/0:16,0:15:12.15:0,12,73	./.
chr10	2747143	.	TG	T	890.61	PASS	AB=0.853;AC=9;AF=0.161;AN=56;BaseQRankSum=6.349;DP=555;FS=5.171;HRun=2;HaplotypeScore=80.8599;InbreedingCoeff=0.4902;MQ=46.78;MQ0=44;MQRankSum=-6.860;QD=6.32;ReadPosRankSum=-0.399;VQSLOD=0.5284;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:36,3:34:27.04:27,0,339	0/0:5,0:4:11.90:0,12,139	0/0:22,0:5:9.02:0,9,102	0/0:14,0:3:9.02:0,9,92	0/0:16,0:15:21.96:0,22,292	0/0:15,0:13:26.12:0,26,345	0/0:19,1:19:38.32:0,38,437	0/1:18,9:24:52.76:308,0,53	0/0:12,0:12:26.62:0,27,287	0/0:22,0:17:50.89:0,51,641	0/0:13,0:10:27.09:0,27,367	0/0:23,0:23:62.38:0,62,839	0/0:19,0:18:41.64:0,42,568	0/0:20,0:18:42.60:0,43,568	1/1:14,4:17:18.06:221,18,0	0/0:30,0:26:61.93:0,62,821	0/0:24,0:18:15.50:0,16,132	0/0:19,0:17:40.46:0,40,542	0/0:19,0:16:45.12:0,45,557	0/0:16,0:15:35.81:0,36,464	0/0:24,1:19:31.77:0,32,392	0/0:22,0:22:47.31:0,47,611	0/0:20,0:18:45.11:0,45,586	0/0:32,2:33:77.34:0,77,1019	1/1:16,1:13:8.45:108,8,0	0/1:19,3:18:69.25:254,0,69	1/1:12,6:15:6.80:120,7,0	0/0:3,1:2:2.99:0,3,24
chr10	2747144	.	G	GT	1140.62	PASS	AB=0.908;AC=10;AF=0.179;AN=56;BaseQRankSum=6.803;DP=552;FS=6.279;HRun=1;HaplotypeScore=83.4633;InbreedingCoeff=0.4147;MQ=46.57;MQ0=45;MQRankSum=-7.402;QD=6.95;ReadPosRankSum=-0.530;VQSLOD=0.2680;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:36,1:32:45.44:45,0,346	0/0:5,0:4:11.93:0,12,138	0/0:21,0:4:9.02:0,9,101	0/0:14,0:3:9.02:0,9,92	0/0:11,0:16:23.78:0,24,297	0/0:15,0:13:25.95:0,26,333	0/0:20,0:19:39.42:0,39,441	0/1:26,2:25:54.34:335,0,54	0/0:13,0:13:27.30:0,27,305	0/0:22,0:17:51.14:0,51,650	0/0:13,0:10:27.09:0,27,359	0/0:24,0:23:63.13:0,63,821	0/0:19,0:18:41.63:0,42,523	0/0:19,0:17:42.12:0,42,545	1/1:10,8:17:18.05:228,18,0	0/0:29,0:25:62.43:0,62,796	0/1:26,0:20:17.56:18,0,140	0/0:19,0:17:44.77:0,45,547	0/0:18,0:15:45.12:0,45,549	0/0:16,0:15:36.53:0,37,459	0/0:24,0:18:31.15:0,31,380	0/0:22,0:22:48.07:0,48,597	0/0:20,0:18:45.11:0,45,567	0/0:34,0:33:78.09:0,78,991	1/1:10,6:12:8.49:124,8,0	0/1:12,8:18:69.48:360,0,69	1/1:10,8:15:6.85:181,7,0	0/0:4,0:2:3:0,3,25
chr10	2747160	.	TGTGTGAGA	T	1013.81	PASS	AB=0.901;AC=7;AF=0.135;AN=52;BaseQRankSum=4.587;DP=527;FS=0.000;HRun=0;HaplotypeScore=147.5032;InbreedingCoeff=0.1511;MQ=45.95;MQ0=52;MQRankSum=-5.110;QD=7.68;ReadPosRankSum=-3.001;VQSLOD=1.8041;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:35,0:30:1.89:2,0,495	0/0:8,0:6:0.27:0,0,245	./.	./.	0/0:18,0:17:20.36:0,20,593	0/1:20,0:16:4.08:4,0,723	0/0:19,0:17:31.04:0,31,620	1/1:10,16:23:13.13:819,13,0	0/0:14,0:13:22.26:0,22,640	0/0:26,0:18:48.62:0,49,1314	0/0:12,0:9:21.07:0,21,624	0/0:22,0:21:57.67:0,58,1633	0/0:19,0:17:39.60:0,40,946	0/0:21,0:18:42.05:0,42,1307	0/0:17,0:17:7.16:0,7,151	0/0:27,0:23:56.91:0,57,1565	0/0:25,0:19:21.07:0,21,555	0/0:16,0:12:22.84:0,23,804	0/0:15,0:11:33.11:0,33,766	0/0:21,0:18:28.27:0,28,763	0/0:21,0:17:24.08:0,24,654	0/0:25,0:24:42.03:0,42,941	0/0:21,0:19:40.77:0,41,1089	0/0:34,0:34:80.47:0,80,1675	0/1:9,0:15:7.13:7,0,46	0/1:17,3:18:99:224,0,478	0/1:14,1:13:74.91:75,0,104	0/0:2,0:1:2.99:0,3,24
chr10	2747181	.	A	AAG	953.29	PASS	AB=0.996;AC=29;AF=0.558;AN=52;BaseQRankSum=-0.838;DP=556;FS=0.000;HRun=0;HaplotypeScore=125.8785;InbreedingCoeff=0.0951;MQ=44.34;MQ0=57;MQRankSum=1.009;QD=2.19;ReadPosRankSum=0.422;VQSLOD=2.4672;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:35,0:30:8.09:36,0,8	1/1:7,4:9:3.01:44,3,0	./.	./.	0/0:18,0:17:2.68:0,3,12	0/1:22,1:18:32.67:72,0,33	0/0:19,0:15:2.80:0,3,32	0/1:26,0:24:0:0,0,0	0/0:12,0:11:8.97:0,9,96	0/1:25,0:18:10.18:64,0,10	0/1:18,0:14:24.01:38,0,24	1/1:18,0:17:6.02:76,6,0	1/1:20,0:18:6.32:49,6,0	0/1:29,0:26:1.10:118,0,1	1/1:18,0:16:0.85:41,1,0	0/1:29,0:25:25.96:54,0,26	1/1:21,0:16:12.48:137,12,0	0/1:16,0:11:14.61:38,0,15	1/1:28,0:26:11.66:96,12,0	0/0:22,0:20:2.88:0,3,25	0/0:23,0:20:2.59:0,3,13	0/1:24,0:23:6.15:6,0,97	0/0:22,0:20:3.82:0,4,24	1/1:34,0:34:18.87:157,19,0	0/1:18,0:17:0.40:0,0,0	1/1:17,0:15:9.96:48,10,0	1/1:18,0:15:6.03:22,6,0	0/1:6,0:2:0:0,0,0
chr10	2748092	.	C	CT	1012.29	PASS	AB=0.625;AC=5;AF=0.089;AN=56;BaseQRankSum=8.030;DP=664;FS=12.195;HRun=5;HaplotypeScore=77.9720;InbreedingCoeff=0.7350;MQ=82.31;MQ0=1;MQRankSum=-2.399;QD=20.66;ReadPosRankSum=2.070;VQSLOD=2.2197;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:96.22:0,96,1022	0/0:11,0:11:24.06:0,24,258	0/0:24,0:25:59.67:0,60,584	0/0:17,0:16:26.45:0,26,275	0/0:39,0:39:99:0,108,1159	0/0:27,0:27:75.19:0,75,806	0/0:24,0:24:72.16:0,72,764	0/0:30,0:30:32.61:0,33,258	0/0:15,0:15:39.08:0,39,411	0/0:30,0:30:81.20:0,81,871	0/0:22,0:22:60.15:0,60,645	0/0:22,0:22:57.14:0,57,613	0/0:25,0:25:72.16:0,72,766	0/0:21,0:21:57.12:0,57,604	0/0:28,0:28:73.78:0,74,368	0/0:27,0:27:75.19:0,75,806	0/0:32,0:32:93.23:0,93,999	0/0:11,0:11:27.05:0,27,280	0/0:26,0:26:63.16:0,63,677	0/0:35,0:35:99:0,105,1128	0/0:15,0:14:39.08:0,39,410	0/0:28,0:28:72.18:0,72,774	0/0:28,0:28:84.20:0,84,895	0/0:23,0:23:69.13:0,69,729	0/0:19,1:20:6.52:0,7,161	0/1:12,18:30:53.10:646,0,53	1/1:2,9:13:17.75:307,18,0	1/1:0,6:6:15.05:185,15,0
chr10	2750374	.	G	GT	5556.53	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-5.463;DP=679;FS=0.367;HRun=1;HaplotypeScore=66.1161;InbreedingCoeff=0.9943;MQ=91.56;MQ0=0;MQRankSum=-2.418;QD=43.75;ReadPosRankSum=-0.304;VQSLOD=4.5771;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,99,1384	0/0:11,0:11:33.11:0,33,461	0/0:28,0:28:72.22:0,72,976	0/0:27,0:27:76.79:0,77,1003	0/0:20,0:20:54.17:0,54,734	0/0:13,0:13:39.13:0,39,544	0/0:32,0:32:96.32:0,96,1340	1/1:2,41:43:99:1919,123,0	0/0:23,0:23:69.23:0,69,963	0/0:25,0:25:72.23:0,72,992	0/0:18,0:18:54.18:0,54,751	0/0:27,0:27:81.25:0,81,1114	0/0:33,0:33:99:0,99,1380	0/0:34,0:34:99:0,99,1379	1/1:1,28:29:84.29:1343,84,0	0/0:23,0:23:66.22:0,66,915	0/0:26,0:26:78.26:0,78,1088	0/0:22,0:22:66.22:0,66,920	0/0:30,0:30:90.22:0,90,1176	0/0:24,0:24:72.24:0,72,1004	0/0:38,0:38:99:0,111,1513	0/0:14,0:14:42.13:0,42,570	0/0:19,0:19:51.17:0,51,713	0/0:31,0:31:93.31:0,93,1300	1/1:0,12:12:30.10:480,30,0	1/1:2,16:18:12.84:765,13,0	1/1:1,14:16:39.13:618,39,0	1/1:0,9:9:27.09:432,27,0
chr10	2751328	.	TTCTCTC	T	565.63	PASS	AB=0.986;AC=14;AF=0.280;AN=50;BaseQRankSum=4.253;DP=573;FS=6.271;HRun=0;HaplotypeScore=123.3578;InbreedingCoeff=0.3868;MQ=72.58;MQ0=7;MQRankSum=1.182;QD=3.11;ReadPosRankSum=-0.810;VQSLOD=1.1690;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:24:3.94:83,4,0	0/0:11,0:11:6.02:0,6,101	./.	./.	0/1:16,0:16:14.58:15,0,72	0/0:17,0:17:12.02:0,12,181	0/1:16,0:16:21.98:22,0,140	1/1:32,0:31:3:50,3,0	0/0:24,0:24:27.09:0,27,650	0/0:22,0:22:15.05:0,15,406	1/1:11,0:11:0.89:2,1,0	0/0:13,0:13:5.52:0,6,128	0/0:19,0:19:18.02:0,18,219	0/0:24,0:24:15.05:0,15,309	0/1:33,0:35:2.98:185,0,3	0/0:26,0:26:17.99:0,18,368	0/0:12,0:12:21.07:0,21,479	0/0:17,0:16:11.93:0,12,178	0/0:21,0:21:15.52:0,16,355	0/0:12,0:12:0:0,0,0	0/0:28,0:26:24.07:0,24,455	0/0:20,0:20:1.30:0,1,109	0/0:25,0:24:15.01:0,15,207	0/0:21,0:21:19.44:0,19,403	0/1:16,0:16:5.77:6,0,79	1/1:21,0:21:20.48:299,20,0	./.	1/1:10,0:10:1.74:45,2,0
chr10	2751385	.	ACACACACACACT	A	1063.52	PASS	AC=12;AF=0.250;AN=48;BaseQRankSum=5.926;DP=505;FS=7.680;HRun=0;HaplotypeScore=172.0285;InbreedingCoeff=0.8997;MQ=44.93;MQ0=33;MQRankSum=-4.638;QD=10.23;ReadPosRankSum=1.125;VQSLOD=2.1652;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:20:0.58:4,1,0	./.	./.	./.	0/0:22,0:20:21.82:0,22,1143	0/0:17,0:14:17.41:0,17,925	0/0:21,0:17:30.56:0,31,1349	1/1:17,0:16:28.13:270,28,0	0/0:23,0:23:44.88:0,45,1437	0/0:20,0:18:35.65:0,36,661	0/0:15,0:13:20.74:0,21,611	0/0:21,0:20:47.73:0,48,1955	0/0:18,0:17:28.64:0,29,1189	0/0:17,0:17:35.14:0,35,1444	1/1:21,0:21:9.46:75,9,0	0/0:27,0:25:38.15:0,38,1474	0/0:16,0:15:32.60:0,33,1144	0/0:25,0:23:28.18:0,28,1591	0/0:21,0:20:33.66:0,34,769	0/0:18,0:17:17.53:0,18,654	0/0:40,0:37:24.40:0,24,1152	0/0:21,0:20:15.06:0,15,822	0/0:16,0:14:27.09:0,27,1041	0/0:32,0:31:38.76:0,39,1361	./.	1/1:18,1:18:48.05:495,48,0	1/1:16,1:15:6.80:145,7,0	1/1:4,2:5:9.45:233,9,0
chr10	2751414	.	CAG	C	581.25	PASS	AB=1.000;AC=14;AF=0.250;AN=56;BaseQRankSum=10.089;DP=572;FS=5.452;HRun=0;HaplotypeScore=96.8790;InbreedingCoeff=0.5324;MQ=53.99;MQ0=29;MQRankSum=-6.659;QD=4.09;ReadPosRankSum=-4.863;VQSLOD=0.2889;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,14:18:5.98:47,6,0	0/0:5,0:5:1.80:0,2,118	0/1:21,0:9:20.35:20,0,34	0/0:22,0:9:3.34:0,3,114	0/0:21,0:21:51.05:0,51,781	0/0:18,0:17:39.02:0,39,507	0/0:21,0:21:40.62:0,41,717	1/1:20,0:18:23.61:155,24,0	0/0:25,0:25:37.13:0,37,680	0/1:16,0:15:16.87:17,0,448	0/0:16,0:16:29.91:0,30,359	0/0:23,0:23:61.03:0,61,966	0/0:20,0:19:16.96:0,17,618	0/0:25,0:24:57.12:0,57,872	1/1:15,0:15:3.94:106,4,0	0/0:22,0:21:27.12:0,27,695	0/0:25,0:25:55.43:0,55,921	0/0:25,0:24:29.99:0,30,743	0/0:27,0:22:24.51:0,25,406	0/0:15,0:15:24.07:0,24,412	0/0:44,0:41:55.32:0,55,928	0/0:22,0:22:37.82:0,38,576	0/0:16,0:15:25.70:0,26,580	0/0:38,0:37:57.86:0,58,980	0/1:11,0:11:5.75:79,0,6	1/1:20,0:18:39.12:230,39,0	1/1:13,0:11:11.79:77,12,0	0/1:7,0:6:12.59:22,0,13
chr10	2751420	.	CACACACACAG	C	1819.35	PASS	AB=0.786;AC=9;AF=0.161;AN=56;BaseQRankSum=8.570;DP=570;FS=0.572;HRun=0;HaplotypeScore=161.2201;InbreedingCoeff=0.8335;MQ=56.53;MQ0=31;MQRankSum=-0.330;QD=23.33;ReadPosRankSum=-4.630;VQSLOD=1.8032;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:19:8.39:74,8,0	0/0:6,0:6:18.06:0,18,464	0/0:24,0:10:29.32:0,29,392	0/0:27,0:12:27.98:0,28,542	0/0:20,0:20:48.15:0,48,1730	0/0:19,0:18:42.14:0,42,1430	0/0:20,0:20:49.03:0,49,1709	1/1:3,20:21:59.80:739,60,0	0/0:24,0:24:54.13:0,54,2073	0/0:16,0:15:33.11:0,33,1063	0/0:15,0:15:24.08:0,24,894	0/0:24,0:24:63.19:0,63,2572	0/0:20,0:19:44.18:0,44,1738	0/0:26,0:25:57.67:0,58,2277	0/0:9,0:9:23.96:0,24,302	0/0:22,0:21:28.18:0,28,1867	0/0:25,0:25:75.07:0,75,2401	0/0:23,0:22:45.55:0,46,1962	0/0:30,0:24:56.37:0,56,1300	0/0:13,0:13:27.09:0,27,1074	0/0:48,0:44:84.29:0,84,2845	0/0:21,0:21:42.14:0,42,1548	0/0:15,0:14:42.06:0,42,1573	0/0:37,0:36:75.26:0,75,2667	0/0:8,0:8:17.95:0,18,227	1/1:2,11:11:29.88:548,30,0	1/1:10,1:9:11.45:181,11,0	0/1:8,3:11:60.83:437,0,61
chr10	2752068	.	AGT	A	158	PASS	AB=0.943;AC=14;AF=0.438;AN=32;BaseQRankSum=1.320;DP=589;FS=0.000;HRun=0;HaplotypeScore=88.3525;InbreedingCoeff=-0.1546;MQ=63.64;MQ0=19;MQRankSum=0.452;QD=0.56;ReadPosRankSum=2.187;VQSLOD=1.5146;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	./.	0/1:20,0:22:0:0,0,0	0/1:39,0:39:14.19:14,0,59	./.	0/0:15,0:14:0:0,0,0	0/1:18,0:18:8.11:8,0,37	0/0:9,0:8:9.50:0,10,126	0/1:22,0:21:18.05:18,0,36	0/0:20,0:20:6.02:0,6,77	1/1:25,2:27:3.01:31,3,0	1/1:23,0:26:2.84:14,3,0	0/1:16,1:15:25.18:25,0,37	0/1:22,0:26:10.94:19,0,11	0/1:18,1:19:29.35:29,0,42	./.	0/0:6,0:6:3.01:0,3,43	0/0:36,0:35:6.01:0,6,67	./.	./.	0/1:50,4:54:7.61:93,0,8	./.	./.	1/1:5,0:7:1.12:11,1,0	./.
chr10	2753907	.	C	CA	916.33	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-7.265;DP=691;FS=1.405;HRun=8;HaplotypeScore=66.7727;InbreedingCoeff=0.9888;MQ=76.33;MQ0=0;MQRankSum=-2.169;QD=21.31;ReadPosRankSum=1.711;VQSLOD=4.1669;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,153,1385	0/0:10,0:10:27.01:0,27,247	0/0:12,0:12:23.88:0,24,216	0/0:16,0:16:23.86:0,24,193	0/0:21,0:21:48.01:0,48,439	0/0:15,0:15:39.02:0,39,357	0/0:24,0:24:59.06:0,59,528	0/0:39,0:39:99:0,99,896	0/0:21,0:21:62.99:0,63,564	0/0:22,0:22:54.01:0,54,490	0/0:23,0:23:44.98:0,45,412	0/0:22,0:22:57.01:0,57,517	0/0:24,0:24:62.52:0,63,592	0/0:36,0:36:93:0,93,840	1/1:5,16:21:42.12:485,42,0	0/0:25,0:25:69.01:0,69,625	0/0:41,0:41:99:0,114,1042	0/0:31,0:31:80.98:0,81,724	0/0:17,0:17:39.01:0,39,353	0/0:25,0:25:69.03:0,69,632	0/0:39,0:39:99:0,102,929	0/0:22,0:22:31.12:0,31,409	0/0:20,0:20:54.03:0,54,494	0/0:30,0:30:81.04:0,81,741	1/1:5,17:22:48.14:553,48,0	0/0:29,1:30:46.41:0,46,677	0/0:23,0:23:66.01:0,66,598	0/0:5,0:5:15.01:0,15,137
chr10	2755948	.	TA	T	6329.86	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=13.583;DP=619;FS=0.670;HRun=4;HaplotypeScore=60.7879;InbreedingCoeff=0.9983;MQ=88.79;MQ0=0;MQRankSum=-0.818;QD=32.30;ReadPosRankSum=0.722;VQSLOD=5.2458;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,44:46:99:1440,120,0	0/0:6,0:6:18.06:0,18,252	0/0:35,0:35:77.89:0,78,1031	0/0:14,0:14:28.61:0,29,429	0/0:20,0:20:54.17:0,54,739	0/0:18,0:18:54.18:0,54,756	0/0:15,0:15:45.15:0,45,630	1/1:1,34:35:99:1201,102,0	0/0:21,0:21:60.20:0,60,840	0/0:31,0:31:90.29:0,90,1245	0/0:14,0:14:39.10:0,39,499	0/0:19,0:19:57.18:0,57,780	0/0:17,0:17:45.15:0,45,629	0/0:28,0:28:84.28:0,84,1176	1/1:0,14:14:42.13:504,42,0	0/0:22,0:22:63.21:0,63,882	1/1:0,18:18:51.16:612,51,0	0/0:21,0:21:54.09:0,54,704	0/0:26,1:27:42.22:0,42,979	0/0:11,0:11:33.11:0,33,462	0/0:24,0:24:72.24:0,72,1008	0/0:24,0:24:69.19:0,69,941	0/0:29,0:29:84.23:0,84,1133	0/0:27,0:27:81.27:0,81,1134	1/1:1,15:16:42.13:504,42,0	1/1:2,22:24:27.18:739,27,0	1/1:4,24:28:72.22:862,72,0	1/1:0,15:15:39.12:468,39,0
chr10	2756218	.	C	CA	719.23	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.482;DP=438;FS=1.106;HRun=0;HaplotypeScore=45.8663;InbreedingCoeff=0.9345;MQ=76.13;MQ0=0;MQRankSum=-3.136;QD=39.96;ReadPosRankSum=2.185;VQSLOD=3.8675;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,18:18:51.17:814,51,0	0/0:5,0:5:15.05:0,15,207	0/0:17,0:17:45.15:0,45,617	0/0:15,0:15:41.87:0,42,556	0/0:10,0:10:30.09:0,30,400	0/0:15,0:15:45.15:0,45,628	0/0:22,0:22:66.22:0,66,921	0/0:21,0:21:57.14:0,57,748	0/0:17,0:17:48.16:0,48,669	0/0:16,0:16:48.03:0,48,642	0/0:8,0:8:21.07:0,21,293	0/0:14,0:14:42.14:0,42,586	0/0:15,0:15:45.15:0,45,625	0/0:22,0:22:66.22:0,66,911	0/0:11,0:11:33.11:0,33,460	0/0:11,0:11:33.11:0,33,460	0/0:38,0:38:99:0,111,1531	0/0:33,0:33:96.28:0,96,1303	0/0:17,0:17:48.12:0,48,646	0/0:6,0:6:15.01:0,15,184	0/0:32,0:32:96.30:0,96,1321	0/0:11,0:11:33.11:0,33,460	0/0:16,0:16:48.16:0,48,669	0/0:9,0:9:27.09:0,27,377	0/0:14,0:14:42.14:0,42,585	0/0:12,0:12:36.12:0,36,502	0/0:9,0:9:27.09:0,27,364	0/0:4,0:4:12.04:0,12,167
chr10	2756958	.	ACG	A	3217.75	PASS	AB=0.997;AC=32;AF=0.571;AN=56;BaseQRankSum=2.982;DP=409;FS=5.402;HRun=0;HaplotypeScore=105.5678;InbreedingCoeff=-0.2961;MQ=73.38;MQ0=5;MQRankSum=-3.563;QD=9.27;ReadPosRankSum=-5.776;VQSLOD=1.9097;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:4,13:17:45.54:479,46,0	0/1:8,0:8:10.97:11,0,123	0/0:23,0:16:25.31:0,25,374	0/0:24,0:18:11.92:0,12,326	0/1:18,0:18:47.53:48,0,166	0/1:20,0:20:99:145,0,135	0/1:23,0:23:31.11:31,0,287	1/1:7,4:11:23.97:266,24,0	0/1:15,1:16:28.70:29,0,156	0/1:16,0:16:99:128,0,101	0/1:11,0:11:31.14:31,0,127	0/1:6,0:6:8.71:9,0,63	0/1:10,0:9:14.03:14,0,87	0/1:10,0:10:37.08:37,0,98	1/1:5,16:21:53.99:565,54,0	0/1:13,0:12:37.48:37,0,130	0/1:20,0:20:21.78:22,0,285	0/1:3,0:3:14.51:15,0,20	0/1:11,0:11:44.52:45,0,88	0/0:11,0:11:15.08:0,15,182	0/1:18,0:18:71.40:71,0,251	0/1:16,0:16:42.85:43,0,112	0/1:18,0:17:17.95:18,0,133	0/1:15,0:15:18.90:19,0,200	1/1:4,14:18:44.69:471,45,0	1/1:0,7:7:20.94:227,21,0	1/1:0,9:9:21.07:340,21,0	1/1:0,12:12:18.06:293,18,0
chr10	2757957	.	TCTCCCTCC	T	2284.34	PASS	AC=6;AF=0.115;AN=52;BaseQRankSum=7.607;DP=331;FS=7.531;HRun=0;HaplotypeScore=87.2965;InbreedingCoeff=0.8499;MQ=79.18;MQ0=0;MQRankSum=-8.649;QD=45.69;ReadPosRankSum=0.339;VQSLOD=2.2618;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:9,17:26:39.69:1092,40,0	0/0:11,0:11:24.08:0,24,1011	0/0:10,0:8:9.03:0,9,127	0/0:19,0:18:20.33:0,20,606	0/0:7,0:7:9.03:0,9,377	0/0:12,0:12:33.11:0,33,1389	0/0:14,0:14:24.08:0,24,830	0/0:14,0:14:9.03:0,9,214	0/0:9,0:9:18.06:0,18,757	0/0:14,0:14:33.10:0,33,1246	0/0:9,0:9:15.05:0,15,494	0/0:15,0:15:39.12:0,39,1409	0/0:24,0:24:54.19:0,54,2248	0/0:13,0:13:33.11:0,33,1383	1/1:3,11:14:30.10:783,30,0	0/0:11,0:11:27.09:0,27,1137	0/0:6,0:6:11.93:0,12,242	0/0:9,0:9:18.06:0,18,758	0/0:13,0:13:15.04:0,15,396	0/0:11,0:11:30.10:0,30,1211	0/0:23,0:23:48.16:0,48,1836	0/0:8,0:8:18.06:0,18,755	0/0:12,0:12:30.09:0,30,1145	0/0:9,0:9:15.01:0,15,506	1/1:2,8:10:21.07:548,21,0	./.	0/0:2,0:2:3.01:0,3,108	./.
chr10	2760583	.	TC	T	2235.50	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=10.704;DP=601;FS=1.618;HRun=3;HaplotypeScore=60.3379;InbreedingCoeff=0.9957;MQ=88.52;MQ0=0;MQRankSum=-0.131;QD=32.87;ReadPosRankSum=2.525;VQSLOD=4.1201;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,114,1640	0/0:9,0:9:21.07:0,21,302	0/0:20,0:20:57.13:0,57,764	0/0:23,0:23:61.95:0,62,883	0/0:18,0:18:54.15:0,54,738	0/0:20,0:20:57.18:0,57,800	0/0:21,0:21:63.20:0,63,890	0/0:30,0:30:72.24:0,72,1021	0/0:23,0:23:69.22:0,69,965	0/0:23,0:23:69.22:0,69,962	0/0:14,0:14:42.14:0,42,602	0/0:21,0:21:63.21:0,63,907	0/0:14,0:14:42.12:0,42,585	0/0:22,0:22:66.20:0,66,929	1/1:0,20:20:57.18:706,57,0	0/0:19,0:19:57.17:0,57,786	1/1:1,24:25:72.23:892,72,0	0/0:31,0:31:93.23:0,93,1311	0/0:23,0:23:69.23:0,69,977	0/0:23,0:23:69.22:0,69,973	0/0:21,0:21:63.19:0,63,871	0/0:20,0:20:60.19:0,60,847	0/0:17,0:17:51.17:0,51,733	0/0:28,0:28:84.28:0,84,1208	1/1:0,23:23:63.20:780,63,0	0/0:27,0:27:81.26:0,81,1149	0/0:20,0:18:60.17:0,60,826	0/0:6,0:6:18.05:0,18,241
chr10	2761817	.	GGTGCGTGCGTGC	G	1340.37	PASS	AC=6;AF=0.115;AN=52;BaseQRankSum=5.306;DP=440;FS=1.059;HRun=0;HaplotypeScore=152.5478;InbreedingCoeff=0.7376;MQ=79.98;MQ0=2;MQRankSum=-6.235;QD=20.62;ReadPosRankSum=0.175;VQSLOD=2.2709;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:36:12.04:335,12,0	0/0:8,0:7:9.03:0,9,527	./.	0/0:22,0:19:2.99:0,3,23	0/0:8,0:8:6.02:0,6,350	0/0:9,0:9:12.04:0,12,673	0/0:37,0:37:42.14:0,42,2129	./.	0/0:20,0:20:33.11:0,33,1814	0/0:15,0:15:30.10:0,30,1451	0/0:12,0:12:15.03:0,15,573	0/0:18,0:18:33.11:0,33,1686	0/0:8,0:8:18.06:0,18,900	0/0:17,0:17:24.08:0,24,1320	1/1:9,7:16:18.06:621,18,0	0/0:9,0:9:6.02:0,6,351	0/0:13,0:23:36.12:0,36,874	0/0:13,0:13:30.07:0,30,1427	0/0:15,0:14:9.02:0,9,378	0/0:11,0:11:21.07:0,21,1044	0/0:23,0:23:18.04:0,18,522	0/0:11,0:11:9.03:0,9,523	0/0:6,0:6:12.04:0,12,571	0/0:31,0:31:48.12:0,48,2270	1/1:7,6:13:15.05:516,15,0	0/0:6,0:7:6.02:0,6,205	0/0:10,0:16:24.08:0,24,1168	0/0:2,0:5:9.03:0,9,471
chr10	2762204	.	CTCTTGGACTA	C	1054.02	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.961;DP=717;FS=5.864;HRun=0;HaplotypeScore=203.4619;InbreedingCoeff=0.9982;MQ=96.69;MQ0=0;MQRankSum=-5.249;QD=37.64;ReadPosRankSum=-0.150;VQSLOD=2.8295;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,17:28:35.70:1149,36,0	0/0:10,0:10:27.09:0,27,1413	0/0:32,0:32:90.12:0,90,4007	0/0:39,0:39:95.50:0,95,4281	0/0:30,0:30:90.31:0,90,4736	0/0:32,0:32:90.31:0,90,4556	0/0:24,0:24:66.23:0,66,3438	0/0:28,0:28:78.26:0,78,3656	0/0:20,0:20:60.21:0,60,3154	0/0:12,0:12:30.10:0,30,1451	0/0:19,0:19:57.20:0,57,2916	0/0:28,0:28:81.25:0,81,3743	0/0:29,0:29:84.29:0,84,4125	0/0:14,0:14:39.13:0,39,1957	0/0:36,0:36:99:0,105,5183	0/0:35,0:35:99:0,99,5009	0/0:22,0:22:63.19:0,63,2870	0/0:15,0:15:45.15:0,45,2241	0/0:14,0:14:42.14:0,42,2102	0/0:29,0:29:81.28:0,81,3832	0/0:31,0:31:84.27:0,84,4138	0/0:32,0:31:90.31:0,90,4479	0/0:24,0:24:69.24:0,69,3581	0/0:23,0:23:69.24:0,69,3366	0/0:22,0:22:54.19:0,54,2805	0/0:38,0:38:99:0,108,5446	0/0:33,0:33:96.33:0,96,4928	0/0:18,0:18:42.14:0,42,2088
chr10	2766153	.	T	TA	2090.51	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-7.061;DP=604;FS=20.045;HRun=5;HaplotypeScore=57.6086;InbreedingCoeff=0.9987;MQ=75.15;MQ0=0;MQRankSum=-1.608;QD=33.18;ReadPosRankSum=2.223;VQSLOD=1.8373;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,21:22:60.20:790,60,0	0/0:12,0:12:33.08:0,33,355	0/0:18,0:19:37.33:0,37,344	0/0:15,0:15:26.75:0,27,317	0/0:31,0:31:84.21:0,84,902	0/0:25,0:25:72.16:0,72,765	0/0:16,0:16:48.12:0,48,515	0/0:30,0:30:81.20:0,81,870	0/0:11,0:11:30.07:0,30,322	0/0:33,0:33:81.15:0,81,840	0/0:30,0:30:69.17:0,69,741	0/0:23,0:23:63.11:0,63,657	0/0:19,0:19:48.10:0,48,504	0/0:21,0:21:63.14:0,63,669	1/1:2,17:19:51.17:671,51,0	0/0:19,0:19:54.14:0,54,579	0/0:21,0:21:57.12:0,57,603	0/0:12,0:12:33.08:0,33,355	0/0:15,0:15:42.10:0,42,452	0/0:29,0:29:78.19:0,78,838	0/0:12,0:12:33.08:0,33,355	0/0:28,0:28:78.20:0,78,838	0/0:27,0:27:63.14:0,63,668	0/0:9,0:9:27:0,27,267	1/1:1,21:22:60.19:773,60,0	0/0:38,0:38:99:0,105,1129	0/0:24,0:24:63.16:0,63,676	0/0:22,0:22:66.17:0,66,709
chr10	2772563	.	T	TA	950.58	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-2.793;DP=332;FS=6.131;HRun=10;HaplotypeScore=30.1647;InbreedingCoeff=0.8091;MQ=53.94;MQ0=23;MQRankSum=2.810;QD=16.39;ReadPosRankSum=0.711;VQSLOD=3.0755;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,11:14:21.05:224,21,0	0/0:4,0:4:5.99:0,6,49	0/0:3,0:3:1.75:0,2,22	0/0:2,0:1:2.99:0,3,24	0/0:22,0:22:59.92:0,60,492	0/0:16,0:16:32.94:0,33,271	0/0:7,0:6:14.97:0,15,123	0/0:27,0:28:58.59:0,59,464	0/0:7,0:5:14.98:0,15,123	0/0:9,1:9:3:0,3,130	0/0:12,0:12:32.96:0,33,271	0/0:7,0:7:17.96:0,18,144	0/0:10,0:10:29.97:0,30,246	0/0:11,0:10:20.95:0,21,172	1/1:3,13:14:36.09:383,36,0	0/0:11,0:11:29:0,29,227	1/1:7,10:14:33.04:340,33,0	0/0:11,0:10:20.95:0,21,172	0/0:14,0:13:26.92:0,27,216	0/0:10,0:9:17.96:0,18,145	0/0:9,0:5:11.97:0,12,99	0/0:9,0:9:20.97:0,21,172	0/0:14,0:9:29.95:0,30,243	0/0:15,1:15:35.96:0,36,296	1/1:3,6:7:15.04:160,15,0	0/0:9,0:9:23.95:0,24,194	0/0:21,0:19:49.96:0,50,399	0/0:9,0:8:23.97:0,24,197
chr10	2773082	.	TG	T	1059.88	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.130;DP=737;FS=1.554;HRun=1;HaplotypeScore=69.5722;InbreedingCoeff=0.9943;MQ=87.14;MQ0=0;MQRankSum=-0.657;QD=34.19;ReadPosRankSum=-2.433;VQSLOD=2.8549;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:59,0:59:99:0,171,2596	0/0:7,0:7:21.05:0,21,310	0/0:30,0:30:90.26:0,90,1332	0/0:21,0:21:61.31:0,61,875	0/0:29,0:29:84.29:0,84,1333	0/0:20,0:20:60.19:0,60,928	0/0:18,0:18:54.17:0,54,836	1/1:0,31:31:84.26:1155,84,0	0/0:39,0:39:99:0,117,1861	0/0:35,0:35:99:0,99,1570	0/0:19,0:19:54.13:0,54,768	0/0:27,0:27:81.28:0,81,1291	0/0:25,0:25:72.23:0,72,1127	0/0:27,0:27:81.28:0,81,1292	0/0:36,0:36:99:0,105,1643	0/0:31,0:31:93.30:0,93,1459	0/0:28,0:28:84.27:0,84,1319	0/0:10,0:10:30.08:0,30,436	0/0:19,0:19:54.18:0,54,856	0/0:34,0:34:99:0,102,1614	0/0:32,0:32:96.28:0,96,1483	0/0:27,0:27:81.28:0,81,1286	0/0:14,0:14:42.10:0,42,598	0/0:34,0:34:99:0,102,1625	0/0:12,0:12:36.10:0,36,530	0/0:27,0:27:78.27:0,78,1246	0/0:37,0:37:99:0,111,1703	0/0:9,0:9:27.08:0,27,408
chr10	2774086	.	GAATA	G	346.81	PASS	AB=0.955;AC=9;AF=0.237;AN=38;BaseQRankSum=3.974;DP=261;FS=1.330;HRun=0;HaplotypeScore=44.1573;InbreedingCoeff=0.3662;MQ=81.84;MQ0=0;MQRankSum=-0.245;QD=5.10;ReadPosRankSum=-0.515;VQSLOD=1.4107;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:13,8:21:6.02:91,6,0	./.	./.	./.	0/0:11,0:11:3.01:0,3,68	0/0:13,0:13:12.04:0,12,279	./.	./.	0/0:10,0:10:3.01:0,3,70	./.	0/0:8,0:8:3.01:0,3,65	0/0:5,0:5:3.01:0,3,70	0/0:3,0:3:0.47:0,0,1	0/0:6,0:6:3.01:0,3,66	1/1:1,2:3:6.02:91,6,0	0/0:9,0:9:3.01:0,3,67	1/1:5,9:14:15.05:229,15,0	0/0:9,0:9:3.01:0,3,70	0/0:12,0:12:9.03:0,9,200	0/0:11,0:11:3.01:0,3,70	0/0:3,0:3:6.02:0,6,124	./.	./.	./.	1/1:7,2:9:3.01:46,3,0	0/0:6,0:6:3.01:0,3,70	0/0:10,0:10:21.07:0,21,487	0/1:20,1:21:6.56:7,0,752
chr10	2774629	.	TA	T	2625.37	PASS	AC=8;AF=0.148;AN=54;BaseQRankSum=12.099;DP=631;FS=6.549;HRun=8;HaplotypeScore=62.2204;InbreedingCoeff=0.9996;MQ=80.04;MQ0=0;MQRankSum=-2.679;QD=24.77;ReadPosRankSum=2.388;VQSLOD=4.6006;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,20:24:66:612,66,0	./.	0/0:25,0:25:60.10:0,60,664	0/0:14,0:14:36.02:0,36,381	0/0:30,0:30:84.25:0,84,1005	0/0:28,0:28:84.23:0,84,991	0/0:33,0:33:78.20:0,78,909	0/0:34,0:33:81.22:0,81,956	0/0:18,0:18:42.13:0,42,507	0/0:20,0:20:54.16:0,54,639	0/0:20,0:20:54.15:0,54,641	0/0:22,0:22:63.16:0,63,727	0/0:30,1:31:55.25:0,55,913	0/0:22,0:22:54.15:0,54,640	1/1:3,33:36:96.14:927,96,0	0/0:24,0:24:69.21:0,69,834	1/1:1,22:23:66.11:637,66,0	0/0:11,0:11:30.04:0,30,334	0/0:23,0:23:63.19:0,63,761	0/0:27,0:27:69.19:0,69,810	0/0:12,0:12:30.09:0,30,362	0/0:15,0:15:39.11:0,39,461	0/0:16,0:16:45.11:0,45,529	0/0:19,0:19:54.16:0,54,642	1/1:1,22:23:63.10:608,63,0	0/0:31,0:31:77.25:0,77,894	0/0:36,0:36:99:0,105,1218	0/0:13,0:13:39.12:0,39,471
chr10	2774679	.	T	TA	913.06	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.539;DP=590;FS=3.934;HRun=1;HaplotypeScore=62.0620;InbreedingCoeff=0.9836;MQ=61.80;MQ0=0;MQRankSum=-3.752;QD=33.82;ReadPosRankSum=-0.876;VQSLOD=3.1068;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,24:27:72.17:1008,72,0	0/0:5,0:5:15:0,15,150	0/0:16,0:15:39.13:0,39,506	0/0:14,0:13:35.88:0,36,382	0/0:34,0:34:99:0,99,1266	0/0:21,0:21:60.19:0,60,767	0/0:20,0:20:54.14:0,54,671	0/0:38,0:37:99:0,108,1378	0/0:23,0:23:66.21:0,66,857	0/0:19,0:19:54.14:0,54,683	0/0:22,0:21:60.12:0,60,745	0/0:21,0:21:63.17:0,63,777	0/0:33,0:33:96.28:0,96,1206	0/0:22,0:22:63.16:0,63,774	0/0:23,0:23:63.18:0,63,790	0/0:16,0:16:45.11:0,45,543	0/0:26,0:26:72.16:0,72,893	0/0:11,0:11:33.11:0,33,427	0/0:18,0:18:54.16:0,54,687	0/0:28,0:28:81.25:0,81,1037	0/0:22,0:22:66.21:0,66,844	0/0:17,0:17:48.16:0,48,623	0/0:15,0:15:42.12:0,42,526	0/0:19,0:19:57.18:0,57,738	0/0:19,0:19:48.14:0,48,609	0/0:28,0:28:81.25:0,81,1027	0/0:22,0:22:63.20:0,63,813	0/0:11,0:11:33.05:0,33,406
chr10	2775414	.	CAT	C	832.54	PASS	AB=0.842;AC=6;AF=0.111;AN=54;BaseQRankSum=0.790;DP=279;FS=0.000;HRun=0;HaplotypeScore=47.6013;InbreedingCoeff=0.2729;MQ=61.46;MQ0=1;MQRankSum=-5.213;QD=10.41;ReadPosRankSum=-4.710;VQSLOD=1.7327;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:8,0:21:0.22:0,0,0	0/0:5,0:5:9.03:0,9,147	0/0:8,0:5:2.80:0,3,13	0/0:8,0:4:2.96:0,3,19	0/0:11,0:11:21.04:0,21,289	0/0:19,1:20:8.24:0,8,637	0/0:1,0:1:3.01:0,3,49	1/1:18,16:35:78.05:898,78,0	0/0:10,0:10:15.05:0,15,242	0/1:9,0:9:15.80:16,0,271	0/0:8,0:8:6.01:0,6,71	0/0:4,0:4:6.02:0,6,98	0/0:4,0:4:9.03:0,9,147	0/0:5,0:6:8.52:0,9,106	./.	0/0:5,0:5:6.02:0,6,93	0/1:12,0:12:0:0,0,0	0/0:12,0:12:33.11:0,33,529	0/0:17,2:19:2.20:0,2,512	0/0:13,0:13:30.07:0,30,440	0/0:3,0:3:9.03:0,9,143	0/1:2,1:3:27.89:28,0,89	0/0:6,0:6:12.04:0,12,196	0/0:5,0:5:9.03:0,9,143	0/0:1,0:4:0.47:0,0,1	0/0:13,0:13:15.05:0,15,245	0/0:18,1:20:10.22:0,10,595	0/0:9,0:9:15.05:0,15,244
chr10	2775455	.	GTA	G	1916.81	PASS	AB=0.854;AC=11;AF=0.212;AN=52;BaseQRankSum=7.586;DP=277;FS=10.447;HRun=0;HaplotypeScore=46.6621;InbreedingCoeff=0.4857;MQ=52.35;MQ0=3;MQRankSum=0.216;QD=18.26;ReadPosRankSum=0.392;VQSLOD=2.2886;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:2.39:0,2,25	0/1:2,1:3:31.49:31,0,41	./.	0/0:11,0:2:0:0,0,0	0/0:14,0:14:39.12:0,39,613	0/0:15,0:15:33.11:0,33,542	0/0:3,0:3:6.02:0,6,99	1/1:19,27:46:81.20:958,81,0	0/0:7,0:7:21.07:0,21,344	0/0:6,0:6:18.06:0,18,297	0/0:9,0:9:27.09:0,27,443	0/0:4,0:4:3.01:0,3,47	0/0:4,0:4:12.04:0,12,194	0/0:5,0:5:15.05:0,15,239	./.	0/0:3,0:3:6.02:0,6,96	0/0:8,0:8:2.96:0,3,19	0/1:11,1:12:7.44:7,0,388	0/0:23,0:21:45.15:0,45,732	0/0:10,0:10:27.09:0,27,443	0/0:8,0:8:21.07:0,21,335	0/0:3,0:3:3.01:0,3,50	0/1:7,1:8:16.44:16,0,276	0/0:8,0:8:24.08:0,24,396	0/0:2,0:2:0.47:0,0,1	1/1:2,9:11:27.09:337,27,0	1/1:4,15:19:17.22:497,17,0	1/1:0,6:6:18.06:225,18,0
chr10	2777017	.	TA	T	823.37	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.210;DP=684;FS=2.388;HRun=7;HaplotypeScore=76.9182;InbreedingCoeff=0.9952;MQ=69.61;MQ0=0;MQRankSum=0.640;QD=24.22;ReadPosRankSum=0.388;VQSLOD=4.0013;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,153,1909	0/0:14,0:14:39.12:0,39,491	0/0:14,0:15:30.09:0,30,372	0/0:16,0:16:35.68:0,36,400	0/0:32,0:32:87.26:0,87,1080	0/0:23,0:23:69.21:0,69,856	0/0:26,0:26:60.19:0,60,755	0/0:20,0:20:51.15:0,51,621	0/0:29,0:29:66.21:0,66,830	0/0:28,0:28:69.21:0,69,857	0/0:20,0:20:51.16:0,51,642	0/0:20,0:20:48.14:0,48,590	0/0:25,0:25:72.23:0,72,905	0/0:23,0:23:57.18:0,57,717	0/0:32,0:32:87.26:0,87,1071	0/0:26,0:26:69.21:0,69,856	1/1:3,31:34:90.20:918,90,0	0/0:22,0:21:48.15:0,48,603	0/0:24,0:24:69.20:0,69,844	0/0:28,0:28:75.24:0,75,944	0/0:16,0:16:45.14:0,45,566	0/0:28,0:28:84.27:0,84,1057	0/0:21,0:21:60.19:0,60,753	0/0:23,0:23:63.20:0,63,791	0/0:21,0:21:60.19:0,60,755	0/0:33,0:33:87.28:0,87,1094	0/0:24,0:24:57.18:0,57,712	0/0:7,0:7:21.07:0,21,264
chr10	2777482	.	T	TA	769.06	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-5.477;DP=623;FS=9.720;HRun=10;HaplotypeScore=66.0104;InbreedingCoeff=0.8554;MQ=76.29;MQ0=0;MQRankSum=-2.824;QD=21.36;ReadPosRankSum=1.942;VQSLOD=4.4282;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,32:36:81.20:864,81,0	0/0:11,0:11:32.96:0,33,271	0/0:13,0:13:7.93:0,8,130	0/0:15,0:16:21.34:0,21,184	0/0:25,0:25:36.87:0,37,500	0/0:26,0:26:71.60:0,72,578	0/0:14,0:14:35.11:0,35,311	0/0:31,0:33:80.72:0,81,638	0/0:25,0:25:65.84:0,66,531	0/0:35,0:35:80.87:0,81,662	0/0:29,0:29:83.88:0,84,686	0/0:19,0:19:53.94:0,54,443	0/0:16,0:17:46.96:0,47,370	0/0:22,0:22:56.89:0,57,463	0/0:18,0:18:50.93:0,51,419	0/0:17,0:17:47.87:0,48,384	0/0:27,0:26:71.91:0,72,591	0/0:14,0:14:29.94:0,30,246	0/0:15,1:16:6.93:0,7,259	0/0:36,0:37:97.88:0,98,788	0/0:15,0:15:41.92:0,42,339	0/0:18,0:18:47.93:0,48,394	0/0:30,1:31:78.28:0,78,629	0/0:11,0:11:29.94:0,30,243	0/0:24,0:25:64.93:0,65,519	0/0:32,0:32:83.88:0,84,688	0/0:32,0:31:86.85:0,87,706	0/0:9,0:9:23.97:0,24,197
chr10	2777784	.	C	CT	2315.31	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-10.704;DP=695;FS=2.145;HRun=7;HaplotypeScore=66.5048;InbreedingCoeff=0.9970;MQ=78.92;MQ0=0;MQRankSum=-2.555;QD=27.24;ReadPosRankSum=0.934;VQSLOD=4.4458;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,27:31:81.25:972,81,0	0/0:9,0:9:24.03:0,24,228	0/0:21,0:21:56.89:0,57,513	0/0:14,0:14:24.06:0,24,229	0/0:29,0:29:84.12:0,84,806	0/0:27,0:27:71.59:0,72,671	0/0:22,0:22:54:0,54,505	0/0:29,0:29:72.08:0,72,684	0/0:28,0:28:84.12:0,84,805	0/0:26,0:26:72.08:0,72,686	0/0:29,0:29:81.13:0,81,782	0/0:35,0:35:90.13:0,90,865	0/0:37,0:37:96.13:0,96,917	0/0:25,0:25:75.12:0,75,724	1/1:2,24:26:57.04:689,57,0	0/0:21,0:21:63.09:0,63,603	0/0:23,0:23:63.07:0,63,601	0/0:13,0:13:36.04:0,36,341	0/0:25,0:25:63.09:0,63,608	0/0:29,0:29:78.12:0,78,753	0/0:25,0:25:72.09:0,72,687	0/0:23,0:23:69.10:0,69,662	0/0:28,0:28:81.13:0,81,782	0/0:27,0:27:72.06:0,72,686	1/1:4,24:28:66.20:797,66,0	0/0:31,0:31:81.11:0,81,778	0/0:24,0:24:65.98:0,66,618	0/0:9,0:9:21.03:0,21,203
chr10	2778967	.	AAAAAAG	A	3400.31	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=9.878;DP=537;FS=1.699;HRun=0;HaplotypeScore=116.2262;InbreedingCoeff=0.9783;MQ=64.93;MQ0=0;MQRankSum=-8.164;QD=47.23;ReadPosRankSum=-1.007;VQSLOD=3.4651;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,102,2911	0/0:11,0:11:30.10:0,30,931	0/0:17,0:13:15.51:0,16,705	0/0:13,0:13:21.83:0,22,670	0/0:21,0:21:59.91:0,60,1517	0/0:27,0:27:72.22:0,72,2121	0/0:17,0:17:48.14:0,48,1336	1/1:6,19:25:59.79:1062,60,0	0/0:19,0:19:51.14:0,51,1397	0/0:27,0:27:81.24:0,81,2361	0/0:15,0:15:36.09:0,36,1044	0/0:14,0:14:36.12:0,36,1121	0/0:16,0:16:42.13:0,42,1204	0/0:16,0:16:48.16:0,48,1532	0/0:27,0:26:75.21:0,75,2142	0/0:18,0:18:54.17:0,54,1599	0/0:20,0:20:47.48:0,47,1053	0/0:20,0:20:48.16:0,48,1549	0/0:13,0:13:33.10:0,33,947	0/0:26,0:26:66.18:0,66,1819	0/0:14,0:14:36.09:0,36,995	0/0:18,0:18:54.19:0,54,1658	0/0:19,0:19:50.96:0,51,1350	0/0:16,0:16:45.14:0,45,1413	0/0:24,0:24:68.88:0,69,1972	1/1:0,15:15:45.10:886,45,0	1/1:1,27:28:58.60:1273,59,0	1/1:1,3:4:9.03:180,9,0
chr10	2778973	.	G	GA	440.22	PASS	AB=1.000;AC=4;AF=0.071;AN=56;BaseQRankSum=-0.151;DP=529;FS=8.678;HRun=9;HaplotypeScore=72.1362;InbreedingCoeff=0.5214;MQ=66.61;MQ0=0;MQRankSum=0.427;QD=7.59;ReadPosRankSum=-2.269;VQSLOD=0.6849;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:95.96:0,96,832	0/0:10,0:10:26.99:0,27,234	0/0:18,0:14:26.61:0,27,217	0/0:15,0:14:16.80:0,17,164	0/0:21,0:22:50.47:0,50,401	0/0:24,0:24:59.97:0,60,521	0/0:17,0:17:41.97:0,42,361	0/1:21,0:21:3.15:129,0,3	0/0:20,0:20:50.95:0,51,437	0/0:26,0:26:68.92:0,69,591	0/0:12,0:12:29.99:0,30,260	0/0:13,0:13:32.99:0,33,286	0/0:15,0:15:38.66:0,39,323	0/0:17,0:17:47.99:0,48,417	0/0:28,0:28:74.97:0,75,651	0/0:20,0:20:53.98:0,54,468	1/1:6,15:21:13.05:372,13,0	0/0:19,0:19:47.99:0,48,417	0/0:13,0:13:35.99:0,36,312	0/0:19,0:19:53.98:0,54,467	0/0:13,0:13:36.43:0,36,308	0/0:21,0:21:53.97:0,54,468	0/0:17,0:17:41.62:0,42,339	0/0:17,0:17:50.99:0,51,442	0/0:24,0:24:68.66:0,69,583	0/1:16,0:16:19.97:50,0,20	0/0:28,0:28:10.16:0,10,54	0/0:4,0:4:5.61:0,6,17
chr10	2779376	.	CTGTGTG	C	130.20	PASS	AB=0.808;AC=3;AF=0.060;AN=50;BaseQRankSum=4.624;DP=575;FS=23.171;HRun=0;HaplotypeScore=120.6813;InbreedingCoeff=0.2451;MQ=61.75;MQ0=15;MQRankSum=-2.050;QD=3.25;ReadPosRankSum=-1.919;VQSLOD=0.5752;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:14.68:0,15,148	0/0:14,0:14:12.51:0,13,352	./.	./.	0/0:16,0:16:12.02:0,12,277	0/0:20,0:20:15.03:0,15,259	0/0:24,0:24:3.44:0,3,21	0/0:31,0:31:2.24:0,2,5	0/0:20,0:20:24.02:0,24,452	0/0:22,0:22:33.11:0,33,808	0/0:11,0:11:9.03:0,9,212	0/0:18,0:18:12.01:0,12,220	0/0:20,0:20:17.89:0,18,289	0/0:16,0:16:9.03:0,9,270	0/1:16,2:21:46.75:47,0,103	0/0:21,0:22:18.05:0,18,376	0/0:34,0:31:27.08:0,27,635	0/0:20,0:17:15.05:0,15,278	0/0:18,0:18:6.02:0,6,143	0/0:17,0:17:9.02:0,9,161	0/0:16,0:16:5.76:0,6,110	0/0:15,0:15:6.01:0,6,75	0/0:16,0:17:4.77:0,5,126	0/0:30,0:29:21.07:0,21,478	0/0:11,0:13:1.22:0,1,20	./.	1/1:16,3:19:7.66:177,8,0	0/0:13,0:11:2.97:0,3,20
chr10	2781368	.	G	GT	2750.08	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-4.005;DP=604;FS=19.195;HRun=1;HaplotypeScore=60.7936;InbreedingCoeff=0.9980;MQ=79.31;MQ0=0;MQRankSum=-4.448;QD=36.67;ReadPosRankSum=2.096;VQSLOD=1.9115;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,46:46:99:1775,123,0	0/0:8,0:8:24.08:0,24,311	0/0:18,0:18:53.94:0,54,641	0/0:24,0:24:66.20:0,66,820	0/0:22,0:22:66.16:0,66,813	0/0:19,0:19:54.18:0,54,700	0/0:21,0:21:54.15:0,54,673	0/0:35,0:35:99:0,99,1247	0/0:24,0:24:63.20:0,63,818	0/0:27,0:27:75.22:0,75,930	0/0:19,0:19:57.17:0,57,725	0/0:24,0:24:66.21:0,66,856	0/0:15,0:15:45.15:0,45,584	0/0:18,0:18:54.18:0,54,701	1/1:1,12:13:33.11:489,33,0	0/0:19,0:19:57.16:0,57,711	0/0:29,0:29:84.26:0,84,1074	0/0:14,0:14:36.10:0,36,451	0/0:23,0:23:63.20:0,63,818	0/0:26,0:26:75.24:0,75,965	0/0:29,0:29:81.22:0,81,1020	0/0:9,0:9:24.08:0,24,311	0/0:21,0:21:63.20:0,63,806	0/0:25,0:25:72.21:0,72,917	1/1:1,15:16:42.14:629,42,0	0/0:16,0:16:48.15:0,48,609	0/0:35,0:35:99:0,105,1303	0/0:9,0:9:27.07:0,27,334
chr10	2784658	.	G	GGTTT	3755.04	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=9.824;DP=601;FS=0.765;HRun=0;HaplotypeScore=121.2233;InbreedingCoeff=0.8947;MQ=77.13;MQ0=3;MQRankSum=-2.167;QD=18.68;ReadPosRankSum=0.199;VQSLOD=3.4945;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:29:37.72:360,38,0	0/0:13,0:13:36.07:0,36,553	0/0:26,0:17:8.57:0,9,160	0/0:25,0:17:14.20:0,14,203	0/0:18,0:18:42.12:0,42,656	0/0:20,0:20:42.10:0,42,634	0/0:10,0:10:30.08:0,30,446	1/1:30,0:30:70.32:509,70,0	0/0:21,0:21:57.17:0,57,896	0/0:29,0:29:57.17:0,57,879	0/0:24,0:24:51.09:0,51,765	0/0:13,0:13:33.10:0,33,544	0/0:18,0:18:48.15:0,48,778	0/0:20,0:20:51.14:0,51,826	1/1:5,15:20:30.10:688,30,0	0/0:19,0:19:43.62:0,44,584	0/1:17,0:17:28.78:29,0,120	0/0:12,0:12:36.05:0,36,498	0/0:25,0:25:45.10:0,45,693	0/0:24,0:24:60.03:0,60,867	0/0:12,0:12:24.08:0,24,399	0/0:21,0:21:45.11:0,45,689	0/0:32,0:32:75:0,75,1145	0/0:18,0:18:54.12:0,54,816	1/1:9,18:29:48:1069,48,0	1/1:29,0:29:66.54:365,67,0	1/1:32,0:31:86.83:472,87,0	1/1:15,0:15:43.68:263,44,0
chr10	2784667	.	G	GT	1201.77	PASS	AB=0.843;AC=16;AF=0.286;AN=56;BaseQRankSum=13.279;DP=606;FS=0.367;HRun=12;HaplotypeScore=93.5323;InbreedingCoeff=0.6452;MQ=73.86;MQ0=4;MQRankSum=-1.894;QD=4.87;ReadPosRankSum=3.408;VQSLOD=2.0190;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:28:31.99:189,32,0	0/0:11,0:12:31.86:0,32,225	0/0:28,0:18:11.27:0,11,59	0/0:18,0:12:14.12:0,14,78	0/0:23,0:23:44.67:0,45,328	0/0:17,0:18:40.74:0,41,288	0/0:10,0:11:22.87:0,23,159	1/1:30,0:34:39.94:173,40,0	0/0:21,0:22:51.73:0,52,361	0/0:22,0:23:42.81:0,43,328	0/1:18,2:20:7.66:8,0,276	0/0:15,2:17:6.54:0,7,211	0/0:18,0:18:44.69:0,45,328	0/0:20,0:20:25.12:0,25,343	1/1:17,0:17:8.55:101,9,0	0/1:16,2:21:25.95:26,0,218	0/1:5,1:17:1.23:81,0,1	0/0:13,0:13:26.80:0,27,197	0/0:23,0:24:53.63:0,54,392	0/0:21,3:25:3.33:0,3,339	0/0:8,0:10:25.78:0,26,172	0/0:21,2:23:24.42:0,24,339	0/0:27,0:27:59.63:0,60,438	0/0:19,2:21:24.51:0,25,343	0/1:27,0:27:69.93:102,0,70	1/1:30,0:30:54.12:229,54,0	1/1:30,0:32:79.97:319,80,0	1/1:15,0:16:40.24:164,40,0
chr10	2784669	.	T	TTG	5825.93	PASS	AB=1.000;AC=12;AF=0.214;AN=56;BaseQRankSum=9.658;DP=597;FS=0.000;HRun=0;HaplotypeScore=90.9052;InbreedingCoeff=0.7537;MQ=71.19;MQ0=4;MQRankSum=-3.005;QD=30.66;ReadPosRankSum=3.508;VQSLOD=6.7445;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,25:28:50.22:912,50,0	0/0:12,0:12:36.11:0,36,511	0/0:30,0:17:4.41:0,4,159	0/0:21,0:12:18.83:0,19,215	0/0:21,0:21:60.13:0,60,800	0/0:18,0:18:54.12:0,54,711	0/0:12,0:12:36.07:0,36,453	1/1:38,0:35:92.98:1141,93,0	0/0:21,0:21:63.11:0,63,854	0/0:21,0:21:63.17:0,63,853	0/0:18,0:18:53.75:0,54,734	0/0:17,0:17:47.85:0,48,612	0/0:18,0:18:54.15:0,54,761	0/0:21,0:21:59.97:0,60,837	0/1:17,0:17:9.22:243,0,9	0/0:20,0:20:42.50:0,43,654	0/0:17,0:17:5.17:0,5,121	0/0:13,0:13:39.06:0,39,502	0/0:22,0:22:63.16:0,63,882	0/0:25,0:25:68.60:0,69,908	0/0:10,0:10:27.08:0,27,388	0/0:23,0:23:68.89:0,69,896	0/0:26,0:26:75:0,75,1033	0/0:21,0:21:59.92:0,60,836	0/1:27,0:27:99:292,0,147	1/1:24,5:30:81.14:1164,81,0	1/1:34,0:32:90.31:1387,90,0	1/1:16,0:16:48.13:688,48,0
chr10	2784670	.	T	TG	2981.32	PASS	AB=1.000;AC=12;AF=0.214;AN=56;BaseQRankSum=15.252;DP=594;FS=1.575;HRun=0;HaplotypeScore=87.4411;InbreedingCoeff=0.7855;MQ=71.22;MQ0=4;MQRankSum=-2.849;QD=16.12;ReadPosRankSum=4.200;VQSLOD=5.6087;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:26,1:27:53.30:321,53,0	0/0:12,0:12:36.09:0,36,466	0/0:29,0:16:18.34:0,18,158	0/0:22,0:13:20.42:0,20,189	0/0:20,0:20:60.14:0,60,752	0/0:18,0:18:54.09:0,54,662	0/0:12,0:12:36.05:0,36,417	1/1:20,17:34:71.51:750,72,0	0/0:21,0:21:63.16:0,63,798	0/0:21,0:21:63.15:0,63,787	0/0:18,0:18:46.70:0,47,650	0/0:17,0:17:44.39:0,44,564	0/0:19,0:19:54.16:0,54,707	0/0:21,0:21:60.07:0,60,788	0/1:16,0:16:27.96:98,0,28	0/0:20,0:20:49.62:0,50,621	0/0:17,0:17:27.16:0,27,195	0/0:13,0:13:39.06:0,39,468	0/0:22,0:22:63.15:0,63,810	0/0:25,0:25:60.51:0,61,813	0/0:11,0:11:27.07:0,27,353	0/0:24,0:24:62.75:0,63,830	0/0:26,0:26:75:0,75,951	0/0:21,0:21:55.86:0,56,759	0/1:27,0:27:99:104,0,181	1/1:6,22:28:76.44:675,76,0	1/1:5,29:32:89.77:795,90,0	1/1:2,14:16:47.51:420,48,0
chr10	2784673	.	T	TG	2051.17	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=10.651;DP=587;FS=1.312;HRun=0;HaplotypeScore=89.5436;InbreedingCoeff=0.9984;MQ=69.89;MQ0=4;MQRankSum=-1.295;QD=17.68;ReadPosRankSum=1.587;VQSLOD=5.7378;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:62.61:0,63,483	0/0:11,0:11:33.08:0,33,439	0/0:28,0:15:24.98:0,25,229	0/0:21,0:12:30.03:0,30,231	0/0:20,0:20:60.16:0,60,761	0/0:19,0:19:57.12:0,57,698	0/0:11,0:11:33.06:0,33,394	1/1:20,16:33:78.15:561,78,0	0/0:21,0:21:63.15:0,63,800	0/0:19,0:19:57.13:0,57,729	0/0:18,0:18:46.70:0,47,651	0/0:17,0:17:44.37:0,44,562	0/0:19,0:19:57.13:0,57,727	0/0:21,0:21:60.07:0,60,790	0/0:16,0:16:35.62:0,36,271	0/0:21,0:21:46.62:0,47,594	0/0:16,0:16:25.26:0,25,192	0/0:12,0:12:36.04:0,36,441	0/0:21,0:21:63.18:0,63,822	0/0:24,0:24:57.50:0,58,788	0/0:12,0:12:33.03:0,33,397	0/0:25,0:25:68.42:0,68,863	0/0:25,0:25:75.17:0,75,961	0/0:20,0:20:52.86:0,53,735	0/0:26,0:26:59.75:0,60,562	1/1:7,22:29:59.03:591,59,0	1/1:6,29:33:92.39:728,92,0	1/1:2,14:16:28.25:332,28,0
chr10	2785399	.	AAT	A	2158.26	PASS	AC=14;AF=0.269;AN=52;BaseQRankSum=8.825;DP=236;FS=4.601;HRun=0;HaplotypeScore=33.9557;InbreedingCoeff=0.7936;MQ=84.28;MQ0=0;MQRankSum=1.404;QD=25.39;ReadPosRankSum=-1.094;VQSLOD=3.4004;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,7:7:18.06:232,18,0	0/0:1,0:1:3.01:0,3,51	0/0:5,0:5:3.01:0,3,40	0/0:13,0:12:13.64:0,14,90	0/0:9,0:9:24.08:0,24,405	0/0:17,0:17:42.13:0,42,670	0/0:2,0:2:3.01:0,3,51	1/1:8,27:35:78.24:988,78,0	0/0:3,0:3:9.03:0,9,152	0/0:7,0:7:15.05:0,15,253	0/0:11,0:11:30.10:0,30,506	0/0:7,0:7:18.06:0,18,303	0/0:5,0:5:6.02:0,6,101	0/0:7,0:7:18.06:0,18,304	1/1:0,3:3:6.02:77,6,0	0/0:6,0:6:15.05:0,15,253	0/0:18,0:18:48.15:0,48,783	0/0:18,0:18:42.14:0,42,682	0/0:8,0:8:24.08:0,24,405	0/0:6,0:6:12.04:0,12,202	./.	0/0:1,0:1:3.01:0,3,51	0/0:5,0:5:12.04:0,12,202	./.	1/1:0,7:7:9.03:116,9,0	1/1:2,11:13:30.10:384,30,0	1/1:1,10:11:24.08:309,24,0	1/1:2,7:9:18.06:232,18,0
chr10	2786330	.	G	GC	2522.16	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=3.047;DP=631;FS=0.000;HRun=2;HaplotypeScore=67.8439;InbreedingCoeff=0.9835;MQ=80.05;MQ0=1;MQRankSum=0.369;QD=34.55;ReadPosRankSum=-2.020;VQSLOD=3.0909;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,102,1251	0/0:14,0:14:39.11:0,39,472	0/0:32,0:27:72.17:0,72,874	0/0:24,0:21:60.17:0,60,718	0/0:16,0:15:39.11:0,39,471	0/0:17,0:17:51.16:0,51,632	0/0:16,0:16:42.13:0,42,517	1/1:1,24:24:69.19:938,69,0	0/0:21,0:21:63.20:0,63,777	0/0:25,0:25:68.95:0,69,830	0/0:23,0:23:69.21:0,69,842	0/0:16,0:16:42.13:0,42,520	0/0:22,0:22:60.19:0,60,743	0/0:17,0:17:42.13:0,42,520	0/0:18,0:18:54.15:0,54,655	0/0:21,0:21:57.18:0,57,706	0/0:35,0:35:99:0,99,1198	0/0:27,0:27:81.25:0,81,1000	0/0:25,0:25:69.19:0,69,830	0/0:15,0:15:45.14:0,45,557	0/0:46,0:46:99:0,129,1573	0/0:21,0:21:60.19:0,60,743	0/0:21,0:21:40.16:0,40,626	0/0:22,0:22:63.17:0,63,754	0/0:28,0:28:78.23:0,78,955	1/1:1,22:23:66.19:905,66,0	1/1:1,18:19:51.13:706,51,0	1/1:0,5:5:9.03:130,9,0
chr10	2787060	.	ATGGGC	A	2692.83	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=11.082;DP=780;FS=0.528;HRun=0;HaplotypeScore=167.9106;InbreedingCoeff=0.9965;MQ=76.41;MQ0=2;MQRankSum=-8.626;QD=37.40;ReadPosRankSum=-0.699;VQSLOD=3.3347;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:97.62:0,98,4046	0/0:15,0:15:36.12:0,36,1078	0/0:26,0:26:37.47:0,37,1728	0/0:31,0:26:62.49:0,62,1756	0/0:30,0:30:87.30:0,87,2588	0/0:22,0:22:63.22:0,63,1854	0/0:31,0:31:87.30:0,87,2582	1/1:9,7:16:21.07:434,21,0	0/0:36,0:36:99:0,102,3146	0/0:47,0:47:99:0,132,3936	0/0:34,0:34:99:0,99,3057	0/0:33,0:33:96.29:0,96,2933	0/0:30,0:30:87.30:0,87,2569	0/0:29,0:29:84.29:0,84,2494	0/0:26,0:26:78.27:0,78,2324	0/0:23,0:23:69.24:0,69,2150	0/0:27,0:27:75.26:0,75,2331	0/0:11,0:11:33.11:0,33,995	0/0:16,0:16:48.16:0,48,1480	0/0:37,0:37:99:0,111,3376	0/0:45,0:45:99:0,129,4005	0/0:34,0:34:96.33:0,96,2938	0/0:19,0:19:54.19:0,54,1691	0/0:39,0:39:99:0,117,3570	0/0:19,0:19:57.20:0,57,1785	1/1:6,16:22:54.16:1004,54,0	1/1:7,19:26:51.17:1045,51,0	1/1:3,5:8:18.06:369,18,0
chr10	2787064	.	GCTGGA	G	1971.78	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=11.616;DP=777;FS=0.519;HRun=0;HaplotypeScore=169.4394;InbreedingCoeff=0.9797;MQ=80.27;MQ0=2;MQRankSum=-9.140;QD=34.59;ReadPosRankSum=0.101;VQSLOD=3.4260;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:48,1:49:82.71:0,83,4322	0/0:14,0:14:42.13:0,42,1240	0/0:30,0:29:57.23:0,57,2060	0/0:33,0:29:67.69:0,68,1958	0/0:31,0:31:93.28:0,93,2838	0/0:22,0:22:66.20:0,66,1922	0/0:31,0:31:90.27:0,90,2670	1/1:7,0:7:21.06:281,21,0	0/0:34,0:34:99:0,102,3263	0/0:45,0:45:99:0,135,3983	0/0:35,0:35:99:0,105,3290	0/0:33,0:33:99:0,99,3237	0/0:32,0:32:96.28:0,96,2763	0/0:31,0:31:93.27:0,93,2724	0/0:26,0:26:78.24:0,78,2386	0/0:23,0:23:69.24:0,69,2262	0/0:27,0:27:81.28:0,81,2585	0/0:12,0:12:8.30:0,8,1001	0/0:18,0:18:54.19:0,54,1603	0/0:37,0:37:99:0,111,3509	0/0:45,0:45:99:0,135,4288	0/0:33,0:33:99:0,99,3061	0/0:19,0:19:57.20:0,57,1831	0/0:41,0:41:99:0,123,3867	0/0:19,0:19:57.20:0,57,1879	1/1:16,3:19:51.10:742,51,0	1/1:19,4:23:54.07:777,54,0	1/1:5,3:8:24:331,24,0
chr10	2788216	.	A	AT	846.55	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.508;DP=572;FS=10.834;HRun=1;HaplotypeScore=71.5733;InbreedingCoeff=0.9673;MQ=88.05;MQ0=0;MQRankSum=-4.002;QD=36.81;ReadPosRankSum=1.422;VQSLOD=3.5207;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,22:23:63.21:941,63,0	0/0:8,0:8:24.08:0,24,312	0/0:23,0:23:60.14:0,60,734	0/0:17,0:17:45.12:0,45,558	0/0:22,0:22:63.20:0,63,817	0/0:29,0:29:84.25:0,84,1062	0/0:13,0:13:39.11:0,39,492	0/0:21,0:21:63.19:0,63,785	0/0:22,0:22:63.19:0,63,804	0/0:18,0:18:54.18:0,54,701	0/0:14,0:14:39.13:0,39,506	0/0:16,0:16:48.14:0,48,608	0/0:34,0:34:99:0,102,1316	0/0:23,0:23:60.17:0,60,750	0/0:25,0:25:75.23:0,75,959	0/0:23,0:23:66.20:0,66,843	0/0:21,0:21:63.19:0,63,803	0/0:18,0:18:54.12:0,54,666	0/0:27,0:27:81.25:0,81,1028	0/0:23,0:23:66.21:0,66,857	0/0:27,0:27:78.22:0,78,983	0/0:12,0:12:36.12:0,36,467	0/0:16,0:16:45.15:0,45,583	0/0:18,0:18:27.77:0,28,636	0/0:21,0:21:63.15:0,63,772	0/0:23,0:23:66.21:0,66,855	0/0:30,0:29:87.27:0,87,1114	0/0:4,0:4:12.04:0,12,154
chr10	2789229	.	GT	G	551.05	PASS	AB=0.939;AC=6;AF=0.107;AN=56;BaseQRankSum=3.506;DP=496;FS=0.604;HRun=11;HaplotypeScore=86.3907;InbreedingCoeff=0.3171;MQ=69.80;MQ0=0;MQRankSum=1.010;QD=6.06;ReadPosRankSum=0.361;VQSLOD=2.0798;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:10.37:0,10,55	0/0:9,0:9:21.05:0,21,224	0/1:20,1:16:11.07:11,0,84	0/0:14,0:11:11.90:0,12,139	0/0:10,0:11:32.91:0,33,327	0/0:13,0:13:39.10:0,39,415	0/0:32,0:31:59.23:0,59,683	0/0:30,0:30:43.53:0,44,292	0/0:16,0:16:42.10:0,42,439	0/0:16,0:16:45.11:0,45,479	0/1:10,1:11:0.58:1,0,200	0/0:19,0:19:48.12:0,48,512	0/0:24,0:24:61.02:0,61,628	0/0:23,1:24:41.51:0,42,637	0/0:17,0:17:25.17:0,25,108	0/0:17,0:17:36.09:0,36,384	1/1:4,29:33:77.89:640,78,0	0/0:23,0:23:57.11:0,57,591	0/1:11,1:12:0.59:1,0,200	0/0:10,0:10:20.93:0,21,251	0/0:19,0:19:39.09:0,39,409	0/1:13,0:13:5.66:6,0,255	0/0:11,0:11:30.08:0,30,319	0/0:21,0:21:54.14:0,54,576	0/0:14,0:14:11.72:0,12,57	0/0:17,0:17:27.93:0,28,128	0/0:26,0:26:53.17:0,53,239	0/0:2,0:2:2.74:0,3,12
chr10	2789230	.	T	TTTTTGTTTTTGTTTTTG	6802.07	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=6.620;DP=515;FS=0.000;HRun=0;HaplotypeScore=225.8036;InbreedingCoeff=0.9525;MQ=69.56;MQ0=0;MQRankSum=-10.188;QD=48.24;ReadPosRankSum=0.705;VQSLOD=4.2478;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,8:27:24.55:1653,25,0	0/0:9,0:9:27.08:0,27,935	0/0:23,0:17:9.49:0,9,364	0/0:14,0:11:14.87:0,15,172	0/0:11,0:11:33.06:0,33,1276	0/0:13,0:13:39.13:0,39,1381	0/0:31,0:30:71.31:0,71,2395	1/1:29,0:29:79.26:1492,79,0	0/0:17,0:17:48.13:0,48,1668	0/0:18,0:18:45.14:0,45,1407	0/0:11,0:11:29.84:0,30,759	0/0:19,0:19:54.17:0,54,1956	0/0:23,0:23:67.07:0,67,2118	0/0:24,0:24:72.21:0,72,2650	1/1:1,0:22:30.09:1016,30,0	0/0:17,0:17:39.12:0,39,1362	0/0:32,0:32:62.55:0,63,2876	0/0:24,0:24:66.09:0,66,2375	0/0:12,0:12:30.07:0,30,1046	0/0:11,0:11:27.55:0,28,967	0/0:20,0:20:48.10:0,48,1638	0/0:13,0:13:35.56:0,36,1211	0/0:11,0:11:30.09:0,30,935	0/0:21,0:21:60.18:0,60,2366	1/1:1,0:18:18.06:584,18,0	1/1:17,0:17:43.50:891,44,0	1/1:26,0:26:57.39:1109,57,0	1/1:2,0:2:3.01:58,3,0
chr10	2789232	.	T	TTTGTTTTTG	9153.03	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-7.234;DP=502;FS=0.914;HRun=0;HaplotypeScore=138.4163;InbreedingCoeff=0.9453;MQ=69.63;MQ0=0;MQRankSum=-10.083;QD=68.31;ReadPosRankSum=1.461;VQSLOD=4.8349;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:22:20.70:747,21,0	0/0:9,0:9:27.08:0,27,685	0/0:21,0:15:34.45:0,34,424	0/0:13,0:11:22.10:0,22,213	0/0:11,0:11:33.09:0,33,892	0/0:13,0:13:39.13:0,39,1031	0/0:29,0:28:81.24:0,81,1909	1/1:1,0:29:81.22:1861,81,0	0/0:18,0:18:54.13:0,54,1225	0/0:18,0:18:51.16:0,51,1175	0/0:11,0:11:29.78:0,30,646	0/0:19,0:19:54.17:0,54,1450	0/0:23,0:23:68.94:0,69,1643	0/0:24,0:24:72.22:0,72,1863	1/1:16,0:16:6.34:1130,6,0	0/0:16,0:16:39.13:0,39,1018	0/0:31,0:31:87.18:0,87,1881	0/0:24,0:24:69.08:0,69,1711	0/0:12,0:11:27.06:0,27,718	0/0:11,0:11:30.46:0,30,698	0/0:19,0:19:51.10:0,51,1189	0/0:13,0:13:35.56:0,36,863	0/0:11,0:11:30.10:0,30,772	0/0:21,0:21:60.19:0,60,1666	1/1:14,0:14:18.06:695,18,0	1/1:0,11:20:51.63:1939,52,0	1/1:0,21:31:56.52:2642,57,0	1/1:0,1:2:3.01:139,3,0
chr10	2790288	.	GGCCAT	G	2696.09	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.957;DP=743;FS=10.449;HRun=0;HaplotypeScore=141.1482;InbreedingCoeff=0.9998;MQ=76.46;MQ0=0;MQRankSum=-7.673;QD=51.85;ReadPosRankSum=0.177;VQSLOD=3.7511;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,157,4872	0/0:11,0:11:33.11:0,33,1029	0/0:30,0:30:81.11:0,81,2103	0/0:20,0:20:45.60:0,46,1304	0/0:28,0:28:84.29:0,84,2596	0/0:23,0:23:57.20:0,57,1785	0/0:23,0:23:66.21:0,66,1860	0/0:28,0:28:84.28:0,84,2544	0/0:25,0:25:69.24:0,69,2082	0/0:20,0:20:57.20:0,57,1785	0/0:15,0:15:39.13:0,39,1168	0/0:21,0:21:60.21:0,60,1839	0/0:28,0:28:84.26:0,84,2491	0/0:30,0:30:87.30:0,87,2675	1/1:2,26:28:75.26:1597,75,0	0/0:23,0:22:69.24:0,69,2161	0/0:21,0:21:60.21:0,60,1825	0/0:20,0:20:57.20:0,57,1732	0/0:28,0:28:74.82:0,75,2313	0/0:25,0:25:72.25:0,72,2227	0/0:44,0:44:99:0,123,3792	0/0:25,0:25:75.26:0,75,2318	0/0:37,0:37:99:0,111,3444	0/0:36,0:36:99:0,105,3161	1/1:3,21:24:60.19:1221,60,0	0/0:33,0:33:99:0,99,3070	0/0:29,0:28:81.27:0,81,2468	0/0:15,0:15:45.15:0,45,1409
chr10	2792025	.	G	GAA	2584.30	PASS	AB=0.983;AC=10;AF=0.179;AN=56;BaseQRankSum=0.451;DP=491;FS=29.955;HRun=8;HaplotypeScore=65.2735;InbreedingCoeff=0.7771;MQ=79.83;MQ0=1;MQRankSum=-2.063;QD=18.46;ReadPosRankSum=-3.476;VQSLOD=-0.5263;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:66.11:0,66,707	0/0:8,0:8:24.06:0,24,268	0/1:27,1:25:22.74:23,0,346	0/1:15,0:14:3.01:3,0,96	0/0:23,0:23:66.16:0,66,726	0/0:15,0:15:42.10:0,42,459	0/0:13,0:13:33.08:0,33,368	1/1:10,0:39:94.49:939,94,0	0/0:16,0:16:48.13:0,48,534	0/0:18,0:18:42.11:0,42,468	0/0:22,0:22:66.18:0,66,736	0/0:11,0:11:27.06:0,27,301	0/0:16,0:16:45.10:0,45,492	0/0:15,0:15:44.79:0,45,479	0/0:10,0:10:30.08:0,30,334	0/0:24,0:24:69.15:0,69,750	0/0:24,0:24:54.13:0,54,602	0/0:5,0:5:9.01:0,9,100	0/0:16,0:16:45.10:0,45,494	0/0:21,0:22:59.89:0,60,640	0/0:16,0:16:45.11:0,45,502	0/0:7,0:7:21.02:0,21,220	0/0:16,0:16:48.13:0,48,535	0/0:11,0:11:33.05:0,33,354	0/0:19,0:19:57.11:0,57,613	1/1:6,18:25:26.24:814,26,0	1/1:5,19:25:42.06:637,42,0	1/1:0,7:7:21.07:333,21,0
chr10	2792631	.	A	ATT	946.27	PASS	AB=0.827;AC=13;AF=0.232;AN=56;BaseQRankSum=4.583;DP=566;FS=0.984;HRun=13;HaplotypeScore=88.6864;InbreedingCoeff=0.6870;MQ=72.83;MQ0=0;MQRankSum=0.317;QD=6.18;ReadPosRankSum=-2.310;VQSLOD=0.1059;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:35:42.48:0,42,422	0/0:10,0:10:23.92:0,24,203	0/0:19,0:16:22.25:0,22,162	0/1:11,0:9:4.94:11,0,5	0/0:18,0:20:40.40:0,40,338	0/0:14,0:14:26.88:0,27,238	0/0:20,0:23:23.94:0,24,271	1/1:19,14:35:53.59:577,54,0	0/0:23,0:23:32.69:0,33,287	0/0:24,0:25:35.81:0,36,401	0/0:16,0:17:44.64:0,45,378	0/0:21,0:22:13.75:0,14,269	0/1:9,0:11:33.98:34,0,77	0/0:18,0:19:22.56:0,23,164	1/1:9,0:14:15.40:60,15,0	0/0:19,0:20:32.77:0,33,285	0/0:21,0:22:38.46:0,38,325	0/0:6,0:6:5.85:0,6,52	0/0:19,0:20:2.02:0,2,186	0/0:29,0:33:58.56:0,59,560	0/0:15,0:15:23.25:0,23,210	0/0:21,0:25:34.97:0,35,434	0/0:20,0:22:17.86:0,18,301	0/0:20,0:21:15.16:0,15,278	0/1:3,0:13:5.66:34,0,6	1/1:9,1:27:38.55:179,39,0	1/1:6,3:29:14.08:170,14,0	1/1:1,0:12:17.47:61,17,0
chr10	2795200	.	A	AG	1440.10	PASS	AC=26;AF=0.813;AN=32;BaseQRankSum=0.684;DP=140;FS=21.035;HRun=1;HaplotypeScore=22.6391;InbreedingCoeff=0.4435;MQ=42.16;MQ0=17;MQRankSum=-2.784;QD=14.40;ReadPosRankSum=0.488;VQSLOD=1.0618;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:5,0:1:3.01:0,3,39	0/0:7,0:2:2.43:0,2,37	./.	1/1:2,7:5:9.03:134,9,0	1/1:0,6:5:15.05:224,15,0	1/1:6,0:1:2.99:23,3,0	1/1:0,6:5:9.03:134,9,0	1/1:0,8:4:12.04:179,12,0	./.	1/1:3,5:7:9.02:109,9,0	1/1:2,6:5:8.99:109,9,0	1/1:5,8:10:18.03:229,18,0	1/1:5,3:2:3:25,3,0	1/1:3,8:6:12.04:179,12,0	./.	./.	1/1:3,1:2:5.99:67,6,0	./.	./.	1/1:3,4:1:3.01:45,3,0	1/1:2,4:4:6.02:89,6,0	./.	./.	./.	./.	0/0:1,0:1:3.01:0,3,39
chr10	2795201	.	G	GA	967.45	PASS	AC=26;AF=0.813;AN=32;BaseQRankSum=0.537;DP=138;FS=20.705;HRun=3;HaplotypeScore=25.9140;InbreedingCoeff=0.4310;MQ=42.49;MQ0=16;MQRankSum=-2.833;QD=9.87;ReadPosRankSum=1.074;VQSLOD=-0.3160;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:4,0:1:3.01:0,3,37	0/0:7,0:2:2.11:0,2,21	./.	1/1:7,0:4:9:80,9,0	1/1:6,0:5:15.01:134,15,0	1/1:5,1:1:3.01:43,3,0	1/1:6,0:5:9:80,9,0	1/1:8,0:4:11.95:93,12,0	./.	1/1:5,3:7:8.98:90,9,0	1/1:7,1:5:6.89:58,7,0	1/1:10,3:10:18.03:194,18,0	1/1:4,5:2:3.01:43,3,0	1/1:9,1:6:12.01:107,12,0	./.	./.	1/1:3,1:2:6.01:68,6,0	./.	./.	1/1:4,3:2:3:28,3,0	1/1:4,2:4:6.01:54,6,0	./.	./.	./.	./.	0/0:1,0:1:3.01:0,3,37
chr10	2795229	.	AG	A	1351.85	PASS	AB=0.712;AC=25;AF=0.625;AN=40;BaseQRankSum=5.087;DP=198;FS=136.196;HRun=2;HaplotypeScore=24.8719;InbreedingCoeff=0.2900;MQ=26.57;MQ0=46;MQRankSum=-1.660;QD=10.56;ReadPosRankSum=2.639;VQSLOD=0.0942;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:6,2:5:2.94:0,3,18	./.	0/0:5,0:1:2.80:0,3,13	./.	1/1:5,7:6:6.02:77,6,0	1/1:1,8:6:15.05:193,15,0	1/1:0,4:4:12.04:154,12,0	0/0:11,0:2:6.02:0,6,89	1/1:1,6:5:12.04:154,12,0	1/1:3,6:4:12.04:152,12,0	1/1:9,2:2:3.01:38,3,0	0/1:3,5:7:35.02:68,0,35	1/1:2,5:5:9.03:116,9,0	0/1:4,9:10:63.91:207,0,64	0/0:7,5:2:3.01:0,3,44	1/1:1,7:6:12.04:154,12,0	./.	./.	0/1:12,1:7:17.72:18,0,237	1/1:5,3:3:3.01:39,3,0	./.	1/1:6,4:4:3.01:39,3,0	1/1:4,5:4:6.02:77,6,0	./.	./.	0/0:1,0:1:3.01:0,3,44	./.	0/0:5,0:2:3:0,3,25
chr10	2795266	.	A	AC	1013.73	PASS	AB=0.750;AC=21;AF=0.553;AN=38;BaseQRankSum=5.845;DP=242;FS=134.375;HRun=1;HaplotypeScore=17.5712;InbreedingCoeff=0.1261;MQ=22.09;MQ0=71;MQRankSum=-3.259;QD=8.74;ReadPosRankSum=-0.672;VQSLOD=0.4288;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:8,2:6:3.01:0,3,42	./.	./.	./.	1/1:6,8:6:6.02:95,6,0	1/1:1,5:4:6.02:96,6,0	1/1:1,1:1:3.01:48,3,0	0/0:6,0:2:6.02:0,6,84	1/1:1,3:1:3.01:48,3,0	1/1:4,3:3:9.03:144,9,0	0/1:12,3:5:35.95:42,0,36	0/1:3,2:4:14.94:42,0,15	1/1:3,3:4:9.03:131,9,0	1/1:2,7:7:15.05:227,15,0	./.	0/1:2,6:5:32.94:74,0,33	0/0:5,0:3:3.01:0,3,42	0/0:1,1:1:3.01:0,3,42	0/1:11,2:10:65.76:66,0,306	1/1:6,5:4:3.01:48,3,0	./.	./.	0/1:11,5:10:32.94:87,0,33	0/0:8,0:8:12.04:0,12,168	./.	0/0:2,0:1:3.01:0,3,42	./.	./.
chr10	2798101	.	T	TGA	190.17	PASS	AB=0.742;AC=1;AF=0.018;AN=56;BaseQRankSum=-4.211;DP=580;FS=6.664;HRun=0;HaplotypeScore=63.4860;InbreedingCoeff=-0.0210;MQ=53.59;MQ0=12;MQRankSum=-1.272;QD=8.27;ReadPosRankSum=-3.403;VQSLOD=1.7577;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:72.25:0,72,1162	0/0:7,0:7:18.02:0,18,265	0/0:21,0:9:27.04:0,27,349	0/0:15,0:4:11.87:0,12,147	0/0:36,0:35:84.29:0,84,1359	0/0:29,0:29:72.25:0,72,1170	0/0:14,0:13:24.08:0,24,390	0/0:31,0:30:90.31:0,90,1463	0/0:12,0:11:30.10:0,30,477	0/0:18,0:17:51.17:0,51,832	0/0:21,0:21:51.17:0,51,819	0/0:16,0:16:39.12:0,39,612	0/0:20,0:20:45.15:0,45,734	0/0:18,0:18:42.14:0,42,685	0/0:16,0:15:32.76:0,33,526	0/0:11,0:11:24.08:0,24,387	0/0:22,0:22:48.16:0,48,783	0/0:11,0:10:27.09:0,27,433	0/1:15,7:20:99:265,0,625	0/0:33,0:33:69.16:0,69,1063	0/0:22,0:22:42.11:0,42,642	0/0:27,0:27:69.24:0,69,1125	0/0:20,0:19:48.16:0,48,782	0/0:19,0:19:39.13:0,39,636	0/0:20,0:20:48.15:0,48,759	0/0:24,0:23:69.22:0,69,1095	0/0:38,0:38:99:0,102,1655	0/0:5,0:5:12:0,12,144
chr10	2798287	.	TG	T	759.71	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.683;DP=640;FS=5.493;HRun=1;HaplotypeScore=61.0589;InbreedingCoeff=0.9907;MQ=52.03;MQ0=15;MQRankSum=1.763;QD=27.13;ReadPosRankSum=-0.538;VQSLOD=3.0891;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:30:72.24:0,72,1138	0/0:9,0:9:27.09:0,27,430	0/0:35,0:16:42.08:0,42,593	0/0:35,0:14:30.14:0,30,578	0/0:29,0:28:78.59:0,79,1161	0/0:33,0:32:87.30:0,87,1378	0/0:11,0:11:30.07:0,30,420	0/0:22,0:10:27.09:0,27,431	0/0:12,0:12:33.11:0,33,527	0/0:26,0:26:75.26:0,75,1197	0/0:31,0:31:87.30:0,87,1381	0/0:19,0:19:48.16:0,48,766	0/0:18,0:18:48.16:0,48,742	0/0:19,0:19:48.15:0,48,727	0/0:12,0:11:30.10:0,30,479	0/0:13,0:13:36.12:0,36,572	1/1:1,27:28:21.08:852,21,0	0/0:10,0:10:27.09:0,27,431	0/0:24,0:21:63.21:0,63,1007	0/0:30,0:29:78.27:0,78,1235	0/0:18,0:18:54.12:0,54,828	0/0:24,0:24:57.11:0,57,856	0/0:29,0:28:75.21:0,75,1168	0/0:19,0:19:51.13:0,51,786	0/0:21,0:15:33.02:0,33,461	0/0:24,0:23:69.24:0,69,1103	0/0:31,0:31:87.23:0,87,1320	0/0:27,0:26:75.24:0,75,1196
chr10	2801925	.	T	TAA	1457.03	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=0.792;DP=356;FS=25.377;HRun=10;HaplotypeScore=46.7896;InbreedingCoeff=0.9481;MQ=61.27;MQ0=10;MQRankSum=-0.082;QD=19.43;ReadPosRankSum=-0.851;VQSLOD=0.3198;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:22:32.32:114,32,0	0/0:5,0:5:11.83:0,12,121	0/0:9,0:6:8.61:0,9,60	0/0:8,0:6:8.95:0,9,73	0/0:13,0:13:20.86:0,21,213	0/0:14,0:14:36.06:0,36,366	0/0:6,0:6:12:0,12,122	1/1:1,7:11:30.06:373,30,0	0/0:18,0:19:44.83:0,45,439	0/0:20,0:19:54.11:0,54,545	0/0:16,0:15:36.04:0,36,356	0/0:12,0:11:23.99:0,24,232	0/0:15,0:15:35.77:0,36,341	0/0:13,0:13:30.05:0,30,305	0/0:10,0:10:27.01:0,27,258	0/0:12,0:12:30.07:0,30,305	0/0:16,0:16:42.06:0,42,418	0/0:10,0:10:27.04:0,27,275	0/0:13,0:14:35.80:0,36,347	0/0:8,0:8:23.79:0,24,225	0/0:11,0:11:24.02:0,24,244	0/0:9,0:9:14.75:0,15,127	0/0:10,0:10:23.97:0,24,228	0/0:11,0:11:30.02:0,30,305	0/0:15,0:15:39.09:0,39,397	1/1:5,7:10:18.05:249,18,0	1/1:3,14:17:33.11:492,33,0	1/1:2,11:13:27.09:402,27,0
chr10	2802920	.	G	GT	1084.43	PASS	AB=0.964;AC=8;AF=0.143;AN=56;BaseQRankSum=-5.782;DP=528;FS=4.710;HRun=9;HaplotypeScore=65.0926;InbreedingCoeff=0.7490;MQ=64.36;MQ0=0;MQRankSum=-0.571;QD=14.65;ReadPosRankSum=1.834;VQSLOD=3.8638;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:47.97:0,48,417	0/0:7,0:8:23.03:0,23,188	0/0:17,0:18:19.40:0,19,160	0/1:13,0:13:7.53:8,0,156	0/0:40,0:40:99:0,108,933	0/0:21,0:21:59.98:0,60,521	0/0:16,0:17:35.02:0,35,292	0/0:20,0:20:56.94:0,57,485	0/0:22,1:23:29.77:0,30,481	0/0:26,1:27:38.79:0,39,564	0/0:22,0:22:53.97:0,54,465	0/0:15,0:15:35.99:0,36,313	0/0:12,0:12:32.96:0,33,281	0/0:12,0:12:35.99:0,36,313	1/1:1,14:15:39.11:431,39,0	0/0:15,0:15:35.97:0,36,313	1/1:3,12:15:33.09:365,33,0	0/0:10,0:10:23.97:0,24,208	0/0:14,0:13:26.98:0,27,234	0/0:25,0:25:65.97:0,66,569	0/1:12,1:13:3.21:3,0,204	0/0:14,0:14:41.99:0,42,365	0/0:29,0:29:77.94:0,78,673	0/0:17,0:17:9.21:0,9,306	1/1:2,15:18:39.10:425,39,0	0/0:29,0:29:71.97:0,72,625	0/0:30,0:30:71.94:0,72,621	0/0:15,0:15:41.97:0,42,359
chr10	2803011	.	ATTTC	A	250.65	PASS	AC=2;AF=0.038;AN=52;BaseQRankSum=4.518;DP=502;FS=3.473;HRun=0;HaplotypeScore=84.1185;InbreedingCoeff=0.9917;MQ=56.11;MQ0=9;MQRankSum=0.516;QD=27.85;ReadPosRankSum=2.082;VQSLOD=3.0717;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:21:57.20:0,57,1480	0/0:13,0:13:36.11:0,36,855	./.	./.	0/0:25,0:25:66.23:0,66,1689	0/0:16,0:16:48.16:0,48,1257	0/0:15,0:14:27.08:0,27,655	0/0:29,0:26:57.16:0,57,1396	0/0:23,0:23:66.23:0,66,1684	0/0:27,0:27:78.26:0,78,1963	0/0:21,0:21:63.22:0,63,1628	0/0:19,0:19:54.19:0,54,1412	0/0:19,0:19:54.17:0,54,1353	0/0:15,0:15:42.14:0,42,1101	0/0:13,0:13:39.13:0,39,1010	0/0:13,0:13:36.12:0,36,943	1/1:2,7:9:21.07:342,21,0	0/0:12,0:12:30.10:0,30,772	0/0:19,0:15:39.13:0,39,981	0/0:28,0:28:75.26:0,75,1952	0/0:23,0:23:60.21:0,60,1550	0/0:20,0:20:54.19:0,54,1415	0/0:18,0:18:48.16:0,48,1221	0/0:12,0:12:34:0,34,867	0/0:13,0:13:39.13:0,39,1015	0/0:25,0:24:66.23:0,66,1730	0/0:38,0:38:99:0,108,2763	0/0:9,0:9:24.08:0,24,621
chr10	2803022	.	C	CA	226.19	PASS	AC=2;AF=0.038;AN=52;BaseQRankSum=5.136;DP=490;FS=1.267;HRun=1;HaplotypeScore=47.8513;InbreedingCoeff=0.9950;MQ=56.30;MQ0=8;MQRankSum=-0.306;QD=22.62;ReadPosRankSum=0.481;VQSLOD=3.6008;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:20:60.19:0,60,778	0/0:10,0:10:30.10:0,30,390	./.	./.	0/0:23,0:23:66.21:0,66,855	0/0:17,0:17:48.16:0,48,623	0/0:16,0:15:27.09:0,27,350	0/0:22,0:20:60.19:0,60,764	0/0:20,0:20:60.19:0,60,775	0/0:26,0:26:75.24:0,75,970	0/0:22,0:22:57.18:0,57,739	0/0:18,0:18:54.18:0,54,701	0/0:18,0:18:51.17:0,51,662	0/0:14,0:14:42.14:0,42,545	0/0:11,0:11:33.11:0,33,427	0/0:16,0:16:48.16:0,48,623	1/1:2,8:10:24.08:319,24,0	0/0:12,0:12:36.10:0,36,452	0/0:15,0:11:30.09:0,30,374	0/0:29,0:29:81.25:0,81,1036	0/0:19,0:19:57.19:0,57,740	0/0:19,0:19:54.16:0,54,686	0/0:16,0:16:48.12:0,48,605	0/0:13,0:13:33.79:0,34,462	0/0:15,0:15:45.14:0,45,571	0/0:25,0:24:72.20:0,72,895	0/0:37,0:37:99:0,108,1401	0/0:11,0:11:33.05:0,33,382
chr10	2804605	.	TA	T	1664.78	PASS	AC=46;AF=0.852;AN=54;BaseQRankSum=0.193;DP=159;FS=12.231;HRun=2;HaplotypeScore=119.4830;InbreedingCoeff=0.3982;MQ=48.89;MQ0=5;MQRankSum=-1.799;QD=11.89;ReadPosRankSum=3.801;VQSLOD=1.1820;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,4:5:2.83:26,3,0	1/1:0,4:4:11.91:85,12,0	0/0:9,1:1:2.97:0,3,20	0/0:5,0:3:5.75:0,6,54	1/1:0,14:14:13.96:35,14,0	1/1:0,10:10:26.84:196,27,0	1/1:0,6:6:17.87:127,18,0	1/1:0,2:1:3:26,3,0	1/1:0,6:6:14.89:107,15,0	1/1:2,9:11:28.21:225,28,0	1/1:2,6:8:6.07:29,6,0	1/1:0,1:1:2.98:22,3,0	1/1:0,3:2:4.23:25,4,0	1/1:0,2:2:2.49:7,2,0	1/1:0,4:4:10.16:65,10,0	1/1:0,3:3:8.96:69,9,0	1/1:0,7:6:8.35:44,8,0	1/1:1,4:5:11.99:102,12,0	1/1:0,2:2:2.69:26,3,0	1/1:0,9:9:7.80:34,8,0	0/0:0,1:1:0.47:0,0,1	1/1:0,2:2:3.06:9,3,0	1/1:2,7:9:2.58:50,3,0	0/0:0,2:2:0.47:0,0,1	1/1:0,8:8:22.08:150,22,0	1/1:1,6:7:13.96:119,14,0	1/1:0,12:12:29.45:197,29,0	./.
chr10	2804623	.	C	CTTCCT	1058.73	PASS	AC=30;AF=0.833;AN=36;BaseQRankSum=3.757;DP=49;FS=15.465;HRun=0;HaplotypeScore=80.6816;InbreedingCoeff=0.3688;MQ=91.82;MQ0=7;MQRankSum=-2.544;QD=35.29;ReadPosRankSum=3.197;VQSLOD=2.0614;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,1:3:3.01:45,3,0	./.	0/0:11,0:3:9.03:0,9,198	0/0:6,0:3:6.02:0,6,117	1/1:0,2:2:5.65:31,6,0	./.	./.	./.	1/1:0,2:2:6.02:119,6,0	0/0:1,0:1:3.01:0,3,70	1/1:0,2:2:5.51:69,6,0	./.	./.	./.	./.	1/1:0,1:1:3.01:75,3,0	1/1:2,0:2:2.87:18,3,0	1/1:1,1:2:5.95:98,6,0	1/1:0,1:1:2.99:23,3,0	1/1:0,3:3:8.85:112,9,0	1/1:0,1:1:2.96:19,3,0	1/1:0,1:1:2.22:7,2,0	1/1:0,2:2:6.02:74,6,0	./.	1/1:0,2:2:6.01:102,6,0	1/1:0,1:1:3.01:46,3,0	1/1:0,5:5:15.05:331,15,0	./.
chr10	2804629	.	TCC	T	149.88	PASS	AB=0.667;AC=21;AF=0.583;AN=36;BaseQRankSum=3.490;DP=46;FS=7.877;HRun=3;HaplotypeScore=78.7004;InbreedingCoeff=0.3584;MQ=94.48;MQ0=7;MQRankSum=-1.833;QD=6.52;ReadPosRankSum=3.339;VQSLOD=-0.0384;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:1,1:2:0:0,0,0	./.	0/0:11,0:3:9.03:0,9,143	0/0:6,0:3:6.02:0,6,115	0/1:0,2:2:0.64:3,0,1	./.	./.	./.	1/1:0,2:2:3.47:27,3,0	0/0:1,0:1:3.01:0,3,58	0/1:0,2:2:1.10:17,0,1	./.	./.	./.	./.	1/1:0,1:1:3:26,3,0	0/1:1,0:1:0:0,0,0	1/1:0,1:1:3:29,3,0	0/0:0,1:1:1.25:0,1,3	1/1:0,3:3:2.62:24,3,0	0/0:0,1:1:2.80:0,3,13	1/1:0,1:1:1.82:5,2,0	1/1:0,2:2:2.80:7,3,0	./.	1/1:0,2:2:2.98:21,3,0	1/1:0,1:1:0.89:2,1,0	1/1:0,5:5:12.31:94,12,0	./.
chr10	2806084	.	C	CT	1825.88	PASS	AC=20;AF=1.000;AN=20;DP=269;FS=0.000;HRun=1;HaplotypeScore=36.1451;InbreedingCoeff=-0.0795;MQ=12.12;MQ0=222;QD=19.02;VQSLOD=3.6843;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	1/1:0,6:6:18.06:266,18,0	./.	./.	1/1:10,5:5:5.38:49,5,0	./.	./.	./.	./.	1/1:14,2:2:6.02:90,6,0	1/1:3,8:8:24.08:340,24,0	./.	./.	./.	./.	./.	./.	./.	./.	1/1:1,11:11:33.11:487,33,0	./.	1/1:5,1:1:3.01:44,3,0	1/1:2,6:6:18.06:266,18,0	./.	1/1:2,6:6:18.06:266,18,0	1/1:9,1:1:3.01:45,3,0	./.	1/1:3,1:1:3.01:44,3,0
chr10	2806091	.	AT	A	1551.73	PASS	AC=20;AF=1.000;AN=20;DP=275;FS=0.000;HRun=2;HaplotypeScore=38.8786;InbreedingCoeff=-0.0728;MQ=11.99;MQ0=228;QD=15.67;VQSLOD=3.3297;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	1/1:0,6:6:18.06:229,18,0	./.	./.	1/1:10,5:5:9.09:109,9,0	./.	./.	./.	./.	1/1:14,2:2:6.02:78,6,0	1/1:3,8:8:20.91:253,21,0	./.	./.	./.	./.	./.	./.	./.	./.	1/1:2,11:11:29.79:382,30,0	./.	1/1:5,1:1:3.01:38,3,0	1/1:2,6:6:18.06:229,18,0	./.	1/1:2,6:6:18.06:230,18,0	1/1:10,1:1:3.01:39,3,0	./.	1/1:4,1:1:3.01:38,3,0
chr10	2809504	.	GCA	G	788.15	PASS	AB=0.892;AC=16;AF=0.296;AN=54;BaseQRankSum=5.655;DP=501;FS=4.054;HRun=0;HaplotypeScore=72.1104;InbreedingCoeff=-0.1521;MQ=65.32;MQ0=9;MQRankSum=2.279;QD=3.13;ReadPosRankSum=3.512;VQSLOD=1.2522;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:44:21.02:0,21,218	0/0:6,0:6:6.02:0,6,90	./.	0/0:23,0:20:3.01:0,3,39	0/1:21,3:24:80.79:81,0,365	0/1:17,1:18:11.98:12,0,249	0/0:14,0:15:18.05:0,18,252	0/1:20,1:21:20.92:21,0,77	0/0:14,0:13:24.06:0,24,334	0/0:14,0:17:0.07:0,0,252	0/0:14,0:14:26.94:0,27,353	0/0:7,0:7:12.51:0,13,179	0/1:12,2:14:42.05:42,0,225	0/1:18,1:19:25.80:26,0,328	1/1:6,6:14:24.17:227,24,0	0/1:10,1:11:18.02:18,0,145	1/1:11,8:21:20.72:188,21,0	0/1:6,1:7:21.02:21,0,110	0/1:17,1:17:28.97:29,0,137	0/1:18,1:22:45.72:46,0,343	0/1:13,5:20:36.27:36,0,261	0/0:17,0:17:18.03:0,18,227	0/1:16,2:18:8.97:9,0,287	0/1:19,6:25:99:191,0,229	0/0:17,0:17:2.99:0,3,24	0/0:14,0:14:28.17:0,28,254	0/0:16,0:22:8.96:0,9,72	0/0:1,0:4:2.96:0,3,19
chr10	2811242	.	C	CAAACAAAA	8681.01	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-2.584;DP=704;FS=0.000;HRun=0;HaplotypeScore=162.2678;InbreedingCoeff=0.9367;MQ=63.94;MQ0=2;MQRankSum=-10.775;QD=42.55;ReadPosRankSum=-3.839;VQSLOD=3.6279;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:14,23:42:42.14:1567,42,0	0/0:13,0:13:26.61:0,27,629	0/0:31,0:25:15.47:0,15,369	0/0:20,0:15:4.06:0,4,95	0/0:45,0:45:90.09:0,90,2026	0/0:18,0:18:51.15:0,51,1175	0/0:25,0:25:51.05:0,51,892	1/1:33,0:30:60.15:1191,60,0	0/0:30,0:30:57.15:0,57,1257	0/0:25,0:25:36.11:0,36,796	0/0:24,0:24:48.09:0,48,977	0/0:27,0:27:66.21:0,66,1595	0/0:27,0:27:51.13:0,51,1125	0/0:21,0:21:48.13:0,48,992	1/1:16,5:21:39.02:992,39,0	0/0:25,0:25:54.17:0,54,1258	1/1:7,13:23:12.04:438,12,0	0/0:34,0:34:87.14:0,87,1889	0/0:23,0:23:36.04:0,36,631	0/0:40,0:40:98.90:0,99,1936	0/0:12,0:12:18.04:0,18,362	0/0:23,0:23:39.12:0,39,917	0/0:17,0:17:32.98:0,33,530	0/0:19,0:19:39.06:0,39,742	1/1:17,10:26:63.18:1858,63,0	1/1:5,14:20:45.04:1156,45,0	1/1:6,22:30:33.11:1356,33,0	1/1:5,3:8:3.01:123,3,0
chr10	2811268	.	T	TA	1113.07	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.201;DP=631;FS=0.000;HRun=6;HaplotypeScore=85.9921;InbreedingCoeff=0.9595;MQ=65.72;MQ0=2;MQRankSum=-5.187;QD=24.73;ReadPosRankSum=-0.161;VQSLOD=3.1680;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:68.15:0,68,639	0/0:13,0:13:35.98:0,36,367	0/0:24,0:19:18.80:0,19,227	0/0:16,0:10:15.04:0,15,133	0/0:35,0:34:93.19:0,93,941	0/0:20,0:20:57.06:0,57,557	0/0:19,0:19:48.05:0,48,471	0/0:39,0:37:60.93:0,61,728	0/0:24,0:24:72.15:0,72,728	0/0:19,0:19:48.10:0,48,485	0/0:21,0:21:60.14:0,60,612	0/0:27,0:27:72.15:0,72,729	0/0:23,0:23:60.12:0,60,604	0/0:22,0:22:48.09:0,48,481	1/1:2,15:17:39.12:491,39,0	0/0:21,0:21:63.14:0,63,642	0/0:20,0:19:34.76:0,35,383	0/0:30,0:30:87.17:0,87,877	0/0:24,0:24:69.13:0,69,689	0/0:33,0:33:96.13:0,96,948	0/0:17,0:17:39.08:0,39,397	0/0:20,0:20:51.10:0,51,509	0/0:13,0:13:36.08:0,36,366	0/0:21,0:21:57.13:0,57,581	1/1:7,21:27:65.22:744,65,0	0/0:21,0:21:54.94:0,55,567	0/0:22,0:22:47.96:0,48,462	0/0:3,0:3:9.02:0,9,90
chr10	2812224	.	AT	A	823.11	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=7.224;DP=528;FS=1.597;HRun=1;HaplotypeScore=59.7230;InbreedingCoeff=0.6523;MQ=73.10;MQ0=0;MQRankSum=0.387;QD=20.08;ReadPosRankSum=2.341;VQSLOD=3.9952;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,27:27:66.22:916,66,0	0/0:8,0:8:24.08:0,24,334	0/0:13,0:13:36.06:0,36,417	0/0:7,0:7:12.44:0,12,145	0/0:27,0:27:81.22:0,81,1076	0/0:30,0:30:90.26:0,90,1189	0/0:14,0:14:42.08:0,42,529	0/0:34,0:34:99:0,102,1296	0/0:15,0:15:44.93:0,45,502	0/0:19,0:19:57.14:0,57,696	0/0:27,0:27:80.97:0,81,1012	0/0:16,0:16:45.11:0,45,576	0/0:21,0:21:63.20:0,63,859	0/0:15,0:15:45.12:0,45,594	0/0:13,0:13:39.10:0,39,510	0/0:16,0:16:48.14:0,48,650	0/1:14,0:14:9.97:10,0,29	0/0:10,0:10:30.10:0,30,418	0/0:20,0:20:57.17:0,57,761	0/0:33,0:33:93.28:0,93,1260	0/0:6,0:6:18.05:0,18,234	0/0:18,0:18:54.01:0,54,685	0/0:23,0:23:66.18:0,66,876	0/0:14,0:14:36.83:0,37,466	0/0:16,0:16:42.14:0,42,586	0/0:23,0:23:69.15:0,69,894	0/0:28,0:28:75.18:0,75,1010	0/0:21,0:21:63.15:0,63,833
chr10	2812314	.	AGTGAAAGCGGGCAGATACACTGGGC	A	5464.43	PASS	AB=0.524;AC=7;AF=0.125;AN=56;BaseQRankSum=9.110;DP=439;FS=0.704;HRun=0;HaplotypeScore=276.9270;InbreedingCoeff=0.8143;MQ=87.69;MQ0=0;MQRankSum=-6.286;QD=156.13;ReadPosRankSum=2.481;VQSLOD=4.1068;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:78.27:0,78,8866	0/0:3,0:3:9.03:0,9,1018	0/0:16,0:15:45.15:0,45,2809	0/0:17,0:17:46.71:0,47,2926	0/0:27,0:27:81.28:0,81,8955	0/0:20,0:20:60.21:0,60,6141	0/0:12,0:12:36.12:0,36,3459	1/1:0,6:6:18.05:656,18,0	0/0:21,0:21:63.20:0,63,5764	0/0:20,0:20:54.19:0,54,5254	0/0:16,0:16:48.15:0,48,4343	0/0:23,0:23:69.24:0,69,6916	0/0:20,0:20:60.21:0,60,6413	0/0:13,0:13:39.13:0,39,3585	0/0:15,0:15:45.15:0,45,4681	0/0:14,0:14:42.14:0,42,4416	0/0:17,0:17:51.15:0,51,5338	0/0:10,0:10:30.10:0,30,3109	0/0:13,0:13:39.13:0,39,3448	0/0:16,0:16:48.16:0,48,5134	0/0:24,0:24:69.24:0,69,7713	0/0:13,0:13:39.13:0,39,4050	0/0:15,0:15:45.15:0,45,4709	0/0:22,0:22:62.39:0,62,5904	0/0:10,0:10:30.10:0,30,2947	0/1:1,10:11:99:1876,0,326	1/1:0,11:11:24.08:1676,24,0	1/1:0,7:7:18.06:1256,18,0
chr10	2813529	.	AG	A	1941.70	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.254;DP=641;FS=5.019;HRun=2;HaplotypeScore=55.5883;InbreedingCoeff=0.9987;MQ=59.07;MQ0=1;MQRankSum=2.178;QD=32.36;ReadPosRankSum=1.558;VQSLOD=3.3033;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,36:36:99:1285,99,0	0/0:10,0:10:30.09:0,30,431	0/0:41,0:13:33.10:0,33,444	0/0:22,0:11:27.06:0,27,382	0/0:31,0:31:87.29:0,87,1300	0/0:25,0:25:75.21:0,75,1096	0/0:23,0:23:69.23:0,69,1034	0/0:33,0:33:90.30:0,90,1348	0/0:13,0:13:39.12:0,39,564	0/0:33,0:33:96.32:0,96,1421	0/0:29,0:29:87.28:0,87,1284	0/0:19,0:19:57.17:0,57,814	0/0:18,0:18:51.17:0,51,763	0/0:16,0:16:48.16:0,48,717	0/0:25,0:25:72.19:0,72,1052	0/0:28,0:28:84.26:0,84,1217	1/1:1,23:24:60.19:779,60,0	0/0:16,0:16:48.11:0,48,693	0/0:20,0:17:48.16:0,48,702	0/0:27,0:27:81.27:0,81,1212	0/0:11,0:11:30.10:0,30,450	0/0:19,0:19:57.19:0,57,852	0/0:24,0:24:72.23:0,72,1058	0/0:16,0:16:45.14:0,45,654	0/0:18,0:18:54.14:0,54,784	0/0:19,0:19:57.19:0,57,854	0/0:31,0:30:93.31:0,93,1391	0/0:14,0:14:42.14:0,42,629
chr10	2813761	.	C	CCACA	2613.27	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-2.546;DP=594;FS=12.748;HRun=0;HaplotypeScore=124.8039;InbreedingCoeff=0.9980;MQ=57.27;MQ0=5;MQRankSum=-4.057;QD=65.33;ReadPosRankSum=1.264;VQSLOD=5.4752;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:87.30:0,87,1614	0/0:9,0:9:24.08:0,24,447	0/0:35,0:20:60.21:0,60,1092	0/0:24,0:17:45.15:0,45,803	0/0:23,0:23:66.21:0,66,1172	0/0:23,0:23:60.21:0,60,1111	0/0:14,0:14:39.13:0,39,713	0/0:39,0:38:99:0,102,1808	0/0:17,0:17:45.15:0,45,821	0/0:21,0:21:57.20:0,57,1064	0/0:20,0:20:53.93:0,54,976	0/0:20,0:20:57.20:0,57,1056	0/0:18,0:18:39.13:0,39,728	0/0:15,0:15:36.12:0,36,663	1/1:2,21:26:66.23:1746,66,0	0/0:17,0:17:42.14:0,42,784	0/0:30,0:30:75.24:0,75,1369	0/0:14,0:13:36.12:0,36,672	0/0:15,0:14:33.11:0,33,607	0/0:26,0:26:75.26:0,75,1392	0/0:29,0:29:75.26:0,75,1391	0/0:19,0:19:51.16:0,51,921	0/0:15,0:15:39.13:0,39,727	0/0:29,0:29:66.23:0,66,1223	1/1:2,12:14:39.13:989,39,0	0/0:22,0:22:63.22:0,63,1172	0/0:19,0:18:57.20:0,57,1064	0/0:9,0:9:27.09:0,27,504
chr10	2817953	.	GC	G	1254.38	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.181;DP=669;FS=7.580;HRun=3;HaplotypeScore=63.0957;InbreedingCoeff=0.9991;MQ=78.17;MQ0=0;MQRankSum=-1.000;QD=28.51;ReadPosRankSum=1.236;VQSLOD=2.6586;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,27:28:75.24:930,75,0	0/0:11,0:11:33.11:0,33,475	0/0:12,0:12:27.08:0,27,345	0/0:18,0:18:41.06:0,41,504	0/0:38,0:38:99:0,108,1533	0/0:27,0:27:72.20:0,72,1014	0/0:21,0:21:63.21:0,63,907	0/0:29,0:29:84.25:0,84,1143	0/0:22,0:22:66.22:0,66,951	0/0:30,0:30:81.27:0,81,1148	0/0:28,0:28:84.27:0,84,1185	0/0:20,0:20:57.19:0,57,820	0/0:18,0:18:51.17:0,51,735	0/0:29,0:29:84.28:0,84,1209	0/0:33,0:33:90.30:0,90,1296	0/0:22,0:22:66.21:0,66,933	1/1:1,15:16:36.11:446,36,0	0/0:13,0:13:33.11:0,33,475	0/0:27,0:27:75.25:0,75,1074	0/0:27,0:27:78.25:0,78,1104	0/0:18,0:18:51.14:0,51,710	0/0:29,0:29:87.27:0,87,1216	0/0:30,0:30:90.30:0,90,1295	0/0:19,0:19:54.16:0,54,758	0/0:23,0:23:66.22:0,66,950	0/0:39,0:39:99:0,117,1664	0/0:29,0:29:87.29:0,87,1253	0/0:13,0:13:36.12:0,36,518
chr10	2819771	.	T	TA	1541.26	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=3.659;DP=627;FS=2.975;HRun=1;HaplotypeScore=61.6602;InbreedingCoeff=0.9981;MQ=98.13;MQ0=0;MQRankSum=-2.707;QD=38.53;ReadPosRankSum=2.487;VQSLOD=4.3962;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:72.23:0,72,922	0/0:8,0:8:24.05:0,24,294	0/0:35,0:35:99:0,102,1266	0/0:32,0:32:43.28:0,43,827	0/0:30,0:30:87.28:0,87,1128	0/0:27,0:27:78.25:0,78,1000	0/0:17,0:17:48.16:0,48,623	0/0:29,0:29:84.25:0,84,1054	0/0:26,0:26:75.24:0,75,960	0/0:32,0:32:93.30:0,93,1206	0/0:22,0:22:63.18:0,63,800	0/0:12,0:12:36.12:0,36,467	0/0:17,0:17:45.15:0,45,584	0/0:17,0:17:51.17:0,51,661	1/1:0,19:19:54.18:809,54,0	0/0:27,0:27:81.25:0,81,1037	0/0:19,0:19:57.18:0,57,734	0/0:11,0:11:33.06:0,33,394	0/0:22,0:22:66.16:0,66,813	0/0:33,0:33:96.23:0,96,1197	0/0:17,0:17:51.15:0,51,646	0/0:18,0:18:51.15:0,51,648	0/0:25,0:25:75.21:0,75,944	0/0:19,0:19:57.17:0,57,724	1/1:1,20:21:57.19:854,57,0	0/0:27,0:27:81.26:0,81,1040	0/0:30,0:29:90.25:0,90,1121	0/0:10,0:10:26.76:0,27,349
chr10	2821162	.	T	TTCTC	12765.90	PASS	AB=0.517;AC=15;AF=0.268;AN=56;BaseQRankSum=-16.093;DP=706;FS=0.673;HRun=0;HaplotypeScore=107.0351;InbreedingCoeff=0.9128;MQ=91.51;MQ0=1;MQRankSum=-6.797;QD=65.47;ReadPosRankSum=0.125;VQSLOD=6.5614;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,25:28:63.22:1723,63,0	0/0:8,0:8:24.07:0,24,425	0/0:30,0:30:84.18:0,84,1342	0/0:30,0:30:77.35:0,77,1385	0/0:33,0:33:87.23:0,87,1575	0/0:24,0:24:69.20:0,69,1238	0/0:34,0:34:96.28:0,96,1758	1/1:4,37:46:99:3219,132,0	0/0:27,0:27:78.15:0,78,1431	0/0:29,0:28:84.25:0,84,1541	0/0:27,0:27:69.22:0,69,1297	0/0:19,0:19:57.17:0,57,1003	0/0:27,0:27:78.23:0,78,1443	0/0:27,0:27:78.26:0,78,1460	1/1:2,24:27:66.23:1776,66,0	0/0:17,0:17:51.17:0,51,949	1/1:2,21:22:44.76:1185,45,0	0/0:21,0:21:63.20:0,63,1186	0/0:21,0:21:54.19:0,54,1042	0/0:31,0:31:90.28:0,90,1678	0/0:29,0:29:87.27:0,87,1583	0/0:24,0:24:69.21:0,69,1242	0/0:29,0:29:78.26:0,78,1473	0/0:24,0:24:66.22:0,66,1239	1/1:0,23:23:60.21:1640,60,0	0/1:1,14:15:12.99:1095,0,13	1/1:2,20:22:54.19:1472,54,0	1/1:0,8:10:24.08:655,24,0
chr10	2821374	.	TCCTCCTCCC	T	1647.98	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=9.589;DP=391;FS=3.372;HRun=0;HaplotypeScore=109.8050;InbreedingCoeff=0.6615;MQ=60.02;MQ0=17;MQRankSum=-4.651;QD=14.98;ReadPosRankSum=-2.654;VQSLOD=1.7191;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:24,11:34:74.85:1084,75,0	0/0:5,0:5:12.02:0,12,296	0/0:13,0:8:8.92:0,9,133	0/0:12,0:9:17.41:0,17,130	0/0:12,0:11:24.04:0,24,701	0/0:15,0:13:33.04:0,33,1009	0/0:16,0:16:45.11:0,45,1443	1/1:23,0:22:18.72:315,19,0	0/0:16,0:15:41.84:0,42,1196	0/0:12,0:12:24.08:0,24,876	0/0:6,0:6:15.04:0,15,595	0/0:9,0:8:15.01:0,15,579	0/0:10,0:10:24.04:0,24,547	0/0:13,0:12:27.08:0,27,844	0/0:17,0:15:9.02:0,9,97	0/0:7,0:7:15.03:0,15,481	1/1:14,1:15:28.33:240,28,0	0/1:9,0:9:9.52:10,0,426	0/0:13,0:11:21:0,21,200	0/0:12,0:11:30.06:0,30,811	0/0:31,0:28:78.14:0,78,2381	0/0:13,0:13:30.04:0,30,728	0/0:9,0:9:24.04:0,24,673	0/0:28,0:26:66.19:0,66,2357	0/0:12,0:10:20.99:0,21,191	0/1:17,0:16:69.75:70,0,501	0/1:7,0:7:0.82:1,0,43	1/1:4,0:4:11.95:93,12,0
chr10	2821385	.	CTCCT	C	485.57	PASS	AB=1.000;AC=6;AF=0.107;AN=56;BaseQRankSum=4.789;DP=381;FS=1.653;HRun=0;HaplotypeScore=78.8506;InbreedingCoeff=0.4881;MQ=61.55;MQ0=26;MQRankSum=-4.510;QD=6.94;ReadPosRankSum=0.034;VQSLOD=2.1341;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:31,0:30:42.86:43,0,426	0/0:4,0:4:12.01:0,12,213	0/0:22,0:7:17.92:0,18,386	0/0:16,0:11:9.14:0,9,154	0/0:11,0:10:18.04:0,18,405	0/0:12,0:10:24.08:0,24,570	0/0:18,0:17:51.16:0,51,1175	0/0:19,0:17:39.52:0,40,461	0/0:15,0:14:42.11:0,42,809	0/0:10,0:10:30.10:0,30,770	0/0:7,0:7:13.29:0,13,338	0/0:9,0:8:18.06:0,18,440	0/0:11,0:11:30.10:0,30,571	0/0:12,0:11:33.11:0,33,782	1/1:2,15:15:15.05:281,15,0	0/0:8,0:8:24.08:0,24,541	0/1:13,0:13:30.41:30,0,179	0/0:9,0:9:3.69:0,4,416	0/0:13,0:10:26.80:0,27,375	0/0:12,0:11:15.11:0,15,644	0/0:31,0:27:80.08:0,80,1677	0/0:12,0:12:33.11:0,33,620	0/0:10,0:10:27.07:0,27,577	0/0:27,0:25:72.24:0,72,1676	1/1:6,2:8:23.50:264,23,0	0/0:15,0:13:36.09:0,36,617	0/0:7,0:7:5.87:0,6,36	0/0:1,0:1:3.01:0,3,33
chr10	2821423	.	CCT	C	82.32	PASS	AB=0.904;AC=9;AF=0.173;AN=52;BaseQRankSum=3.910;DP=450;FS=4.904;HRun=0;HaplotypeScore=76.0543;InbreedingCoeff=-0.0587;MQ=55.37;MQ0=11;MQRankSum=-0.253;QD=0.66;ReadPosRankSum=2.055;VQSLOD=1.1332;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:15:4.40:18,4,0	0/0:3,0:3:6.02:0,6,90	./.	0/0:40,0:14:3.01:0,3,45	0/0:14,0:14:18.03:0,18,232	0/0:9,0:14:5.99:0,6,50	0/0:20,0:21:15.71:0,16,396	0/0:22,0:22:12.02:0,12,138	0/0:17,0:17:12.34:0,12,317	0/1:23,4:25:25.32:25,0,206	0/1:13,1:14:60.04:60,0,117	0/0:14,0:15:30.03:0,30,386	0/0:7,0:7:2.99:0,3,24	0/1:12,1:12:12.47:12,0,210	0/0:15,0:16:9.37:0,9,66	0/1:8,0:9:18.27:18,0,186	0/0:13,0:12:9.03:0,9,115	0/1:4,1:6:50.83:51,0,91	0/0:8,0:8:3.01:0,3,45	0/0:13,0:12:18.05:0,18,237	0/1:25,1:26:0.41:0,0,391	0/0:9,0:9:7.33:0,7,135	0/1:12,1:13:21.47:21,0,123	0/0:27,3:30:17.56:0,18,588	0/0:14,0:13:0.06:0,0,4	0/0:16,0:15:13.29:0,13,163	./.	0/0:10,0:9:14.88:0,15,115
chr10	2821503	.	C	CT	4551.89	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=7.006;DP=445;FS=7.002;HRun=1;HaplotypeScore=57.2790;InbreedingCoeff=0.9775;MQ=86.03;MQ0=1;MQRankSum=-4.479;QD=41.38;ReadPosRankSum=-0.700;VQSLOD=4.8105;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,31:31:78.27:1243,78,0	0/0:5,0:5:15.05:0,15,208	0/0:10,0:10:29.99:0,30,345	0/0:20,0:20:54.10:0,54,688	0/0:18,0:18:54.18:0,54,753	0/0:19,0:18:51.17:0,51,709	0/0:22,0:22:66.21:0,66,904	1/1:2,21:23:60.18:915,60,0	0/0:15,0:15:44.93:0,45,583	0/0:15,0:15:36.11:0,36,471	0/0:14,0:14:39.13:0,39,544	0/0:15,0:15:44.97:0,45,580	0/0:5,0:5:12.04:0,12,168	0/0:16,0:16:48.16:0,48,664	0/0:15,0:15:38.92:0,39,491	0/0:15,0:15:45.13:0,45,598	1/1:0,19:19:51.17:814,51,0	0/0:16,0:16:48.11:0,48,647	0/0:18,0:18:51.16:0,51,692	0/0:13,0:13:36.09:0,36,482	0/0:12,0:12:36.11:0,36,485	0/0:19,0:19:57.19:0,57,791	0/0:12,0:12:36.12:0,36,500	0/0:23,0:23:69.22:0,69,947	0/0:18,0:18:42.14:0,42,586	1/1:2,20:22:21.27:892,21,0	1/1:0,3:3:8.96:114,9,0	1/1:0,12:12:36.12:575,36,0
chr10	2821856	.	TA	T	1760.94	PASS	AB=0.875;AC=13;AF=0.232;AN=56;BaseQRankSum=8.157;DP=375;FS=1.734;HRun=11;HaplotypeScore=42.8711;InbreedingCoeff=0.8390;MQ=72.89;MQ0=2;MQRankSum=-1.407;QD=14.67;ReadPosRankSum=2.499;VQSLOD=3.8433;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,23:26:65.92:542,66,0	0/0:3,0:4:11.95:0,12,113	0/0:25,0:11:11.79:0,12,66	0/0:22,0:10:12.89:0,13,122	0/0:22,0:22:21.72:0,22,500	0/0:21,0:22:56.98:0,57,590	0/1:6,1:7:6.63:7,0,131	1/1:8,12:20:18.36:250,18,0	0/0:13,0:14:29.23:0,29,339	0/0:15,0:15:42.11:0,42,448	0/0:10,0:10:30.08:0,30,320	0/0:7,0:7:21.05:0,21,224	0/0:5,0:5:15.04:0,15,160	0/0:7,0:7:18.04:0,18,184	0/0:9,0:9:27.07:0,27,288	0/0:6,1:7:18.05:0,18,192	1/1:3,24:27:59.93:493,60,0	0/0:24,2:26:13.56:0,14,528	0/0:20,0:20:44.93:0,45,437	0/0:9,0:10:26.89:0,27,262	0/0:2,0:2:3.01:0,3,32	0/0:4,0:4:12.02:0,12,120	0/0:6,0:6:15:0,15,148	0/0:6,0:6:18.05:0,18,192	0/0:10,1:12:11.28:0,11,306	1/1:5,6:11:17.88:139,18,0	1/1:1,15:16:35.93:296,36,0	1/1:3,10:13:26.96:222,27,0
chr10	2822974	.	CTG	C	882.33	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.421;DP=669;FS=5.031;HRun=0;HaplotypeScore=103.3234;InbreedingCoeff=0.9891;MQ=69.49;MQ0=1;MQRankSum=-1.447;QD=20.52;ReadPosRankSum=-0.355;VQSLOD=3.4450;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,18:22:39.11:538,39,0	0/0:13,0:13:39.12:0,39,657	0/0:27,0:15:21.17:0,21,514	0/0:22,0:13:27.03:0,27,373	0/0:37,0:37:85.38:0,85,1804	0/0:28,0:28:72.10:0,72,1234	0/0:23,0:23:66.23:0,66,1173	0/0:23,0:23:69.21:0,69,1161	0/0:31,0:31:93.27:0,93,1595	0/0:28,0:28:81.25:0,81,1379	0/0:23,0:23:69.21:0,69,1188	0/0:26,0:26:68.87:0,69,1143	0/0:21,0:21:54.19:0,54,989	0/0:20,0:20:60.21:0,60,1082	0/0:26,0:26:47.95:0,48,878	0/0:18,0:18:48.14:0,48,833	1/1:0,20:20:33.04:465,33,0	0/0:24,0:24:54.11:0,54,909	0/0:20,0:20:57.18:0,57,977	0/0:33,0:33:93.23:0,93,1505	0/0:38,0:38:99:0,99,1705	0/0:23,0:23:63.22:0,63,1144	0/0:26,0:26:72.18:0,72,1180	0/0:30,0:29:87.20:0,87,1585	0/0:19,0:19:41.77:0,42,767	0/0:15,0:15:42.09:0,42,731	0/0:22,0:21:47.97:0,48,779	0/0:8,0:8:15.05:0,15,272
chr10	2823021	.	C	CACACACAT	2817.62	PASS	AB=0.908;AC=13;AF=0.232;AN=56;BaseQRankSum=0.818;DP=716;FS=3.281;HRun=0;HaplotypeScore=193.2953;InbreedingCoeff=0.6458;MQ=59.01;MQ0=8;MQRankSum=-3.407;QD=15.23;ReadPosRankSum=-1.749;VQSLOD=2.5987;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:34,0:35:32.39:32,0,177	0/0:7,0:7:21.04:0,21,399	0/0:15,0:7:17.55:0,18,114	0/0:34,0:15:0.78:0,1,138	0/0:42,0:42:99:0,111,2069	0/0:27,0:27:43.46:0,43,1069	0/0:24,0:24:53.75:0,54,1186	1/1:35,0:36:95.76:917,96,0	0/0:36,0:36:99:0,102,2156	0/0:27,0:26:72.54:0,73,1220	0/0:25,0:25:69.59:0,70,1214	0/0:25,0:24:69.07:0,69,1247	0/0:24,0:24:69.09:0,69,1258	0/0:26,0:26:74.85:0,75,1367	0/1:13,0:21:3.10:161,0,3	0/0:20,0:20:57.10:0,57,1031	0/1:26,0:25:76.18:76,0,217	0/0:27,0:27:50.75:0,51,1325	0/0:22,0:20:55.23:0,55,916	0/0:28,0:28:78.04:0,78,1307	0/0:38,0:38:99:0,102,2210	0/0:23,0:23:37.24:0,37,1027	0/0:25,0:24:66.05:0,66,1155	0/0:36,0:35:56.67:0,57,1578	1/1:10,0:20:12.65:266,13,0	1/1:4,11:19:21:1005,21,0	1/1:3,0:20:12.04:414,12,0	1/1:0,6:6:3.01:119,3,0
chr10	2823075	.	GAGAGACAGAGAGAC	G	76.92	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.183;DP=692;FS=4.932;HRun=0;HaplotypeScore=256.3317;InbreedingCoeff=0.8961;MQ=60.27;MQ0=6;MQRankSum=-4.082;QD=2.02;ReadPosRankSum=-4.293;VQSLOD=1.6128;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:50.20:0,50,2500	0/0:7,0:7:18.06:0,18,1219	0/0:32,0:18:18.27:0,18,424	0/0:47,0:29:28.12:0,28,1102	0/0:37,0:37:81.23:0,81,4319	0/0:24,0:24:40.31:0,40,3061	0/0:16,0:16:42.13:0,42,2230	0/0:32,0:32:57.17:0,57,2535	0/0:32,0:32:81.26:0,81,4677	0/0:22,0:22:48.16:0,48,2899	0/0:27,0:27:57.20:0,57,3678	0/0:26,0:25:63.19:0,63,3631	0/0:26,0:26:63.20:0,63,3719	0/0:25,0:25:60.16:0,60,3104	1/1:2,16:18:14.85:128,15,0	0/0:24,0:24:66.23:0,66,4280	0/0:29,0:27:62.98:0,63,3536	0/0:17,0:17:36.12:0,36,1863	0/0:19,0:19:36.12:0,36,2097	0/0:36,0:36:96.32:0,96,5607	0/0:25,0:25:53.87:0,54,3476	0/0:24,0:24:54.19:0,54,3146	0/0:20,0:19:42.13:0,42,2205	0/0:21,0:21:48.64:0,49,2528	1/1:3,17:20:5.95:56,6,0	0/0:20,0:20:48.16:0,48,3031	0/0:26,0:26:54.19:0,54,3618	0/0:6,0:6:9.03:0,9,578
chr10	2824167	.	CT	C	2195.69	PASS	AB=0.543;AC=5;AF=0.093;AN=54;BaseQRankSum=9.222;DP=562;FS=2.889;HRun=2;HaplotypeScore=58.7017;InbreedingCoeff=0.7586;MQ=85.13;MQ0=1;MQRankSum=2.681;QD=31.37;ReadPosRankSum=-2.123;VQSLOD=2.7254;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,105,1505	0/0:4,0:4:12.04:0,12,175	0/0:17,0:17:37.50:0,37,642	0/0:20,0:19:46.80:0,47,561	0/0:17,0:17:48.12:0,48,683	0/0:21,0:21:63.20:0,63,911	0/0:24,0:24:72.22:0,72,1028	1/1:0,28:28:84.23:1045,84,0	0/0:21,0:21:60.19:0,60,868	0/0:24,0:24:69.17:0,69,935	0/0:13,0:13:33.10:0,33,469	0/0:19,0:19:54.18:0,54,793	0/0:18,0:18:54.14:0,54,741	0/0:28,0:28:84.23:0,84,1165	0/0:26,0:26:78.25:0,78,1136	0/0:14,0:14:42.14:0,42,622	0/0:38,0:38:99:0,114,1645	0/0:27,0:27:81.20:0,81,1128	0/0:21,0:21:54.15:0,54,728	0/0:4,0:4:12.04:0,12,178	0/0:17,0:17:51.16:0,51,733	0/0:19,0:19:57.16:0,57,789	0/0:18,0:18:48.13:0,48,687	0/0:32,0:32:96.27:0,96,1367	0/0:14,0:14:39.13:0,39,576	0/1:4,21:25:60.92:696,0,61	1/1:0,17:17:45.15:583,45,0	./.
chr10	2824653	.	CGT	C	314.90	PASS	AB=0.969;AC=7;AF=0.125;AN=56;BaseQRankSum=7.300;DP=608;FS=0.000;HRun=0;HaplotypeScore=105.0596;InbreedingCoeff=0.7688;MQ=63.11;MQ0=10;MQRankSum=-3.414;QD=3.79;ReadPosRankSum=1.626;VQSLOD=2.4628;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:75.45:0,75,863	0/0:6,0:6:15.05:0,15,264	0/0:19,0:13:25.83:0,26,420	0/0:23,0:19:42.14:0,42,668	0/0:23,0:23:60.16:0,60,950	0/0:24,0:24:51.17:0,51,894	0/0:24,0:24:66.15:0,66,1095	0/0:15,0:13:26.89:0,27,221	0/0:23,0:22:58.42:0,58,969	0/0:22,0:21:59.97:0,60,924	0/0:12,0:12:36.12:0,36,637	0/0:23,0:22:60.20:0,60,1015	0/0:15,0:15:45.15:0,45,764	0/0:25,0:25:69.21:0,69,1169	1/1:10,6:16:12.03:131,12,0	0/0:18,0:18:51.13:0,51,830	0/1:30,1:31:41.80:42,0,164	0/0:28,0:28:61.41:0,61,1204	0/0:18,0:18:47.90:0,48,617	0/0:20,0:20:54.15:0,54,905	0/0:47,0:44:99:0,120,2042	0/0:15,0:15:45.14:0,45,756	0/0:20,0:20:51.17:0,51,871	0/0:44,0:44:99:0,117,1913	1/1:10,9:19:15.04:188,15,0	0/0:18,0:18:33.53:0,34,200	1/1:17,0:17:16.24:95,16,0	0/0:2,0:2:3.41:0,3,19
chr10	2824655	.	T	TGC	324.92	PASS	AB=1.000;AC=6;AF=0.107;AN=56;BaseQRankSum=5.714;DP=613;FS=0.000;HRun=0;HaplotypeScore=110.3111;InbreedingCoeff=0.5667;MQ=59.38;MQ0=12;MQRankSum=-3.380;QD=3.96;ReadPosRankSum=0.981;VQSLOD=2.6327;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:80.32:0,80,1080	0/0:6,0:6:15.05:0,15,228	0/0:17,0:11:33.07:0,33,435	0/0:20,0:16:42.14:0,42,628	0/0:24,0:24:60.16:0,60,844	0/0:24,0:24:51.17:0,51,778	0/0:27,0:25:69.15:0,69,977	0/0:14,0:12:34.95:0,35,293	0/0:25,0:24:58.43:0,58,848	0/0:22,0:21:60.03:0,60,850	0/0:12,0:12:36.12:0,36,551	0/0:25,0:24:60.20:0,60,897	0/0:16,0:16:48.15:0,48,711	0/0:25,0:25:69.21:0,69,1028	1/1:6,10:16:11.75:165,12,0	0/0:18,0:18:51.13:0,51,715	0/1:30,0:30:29.54:30,0,204	0/0:28,0:28:70.79:0,71,1059	0/0:19,0:19:53.75:0,54,638	0/0:20,0:20:54.18:0,54,822	0/0:48,0:45:99:0,121,1808	0/0:16,0:16:45.14:0,45,662	0/0:21,0:21:51.17:0,51,773	0/0:45,0:45:99:0,117,1698	1/1:10,9:19:14.26:235,14,0	0/0:17,0:17:42.74:0,43,515	0/1:17,0:17:24.73:25,0,161	0/0:3,0:3:4.56:0,5,38
chr10	2824659	.	CGT	C	1322.86	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=9.051;DP=617;FS=4.308;HRun=0;HaplotypeScore=103.6955;InbreedingCoeff=0.8375;MQ=56.26;MQ0=13;MQRankSum=-3.413;QD=11.21;ReadPosRankSum=1.314;VQSLOD=2.9729;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:39,0:39:38.24:38,0,48	0/0:6,0:6:15.05:0,15,275	0/0:15,0:10:11.66:0,12,350	0/0:17,0:13:38.96:0,39,611	0/0:24,0:24:51.16:0,51,858	0/0:27,0:27:63.08:0,63,1040	0/0:28,0:26:72.19:0,72,1194	1/1:7,4:8:24.03:297,24,0	0/0:28,0:27:63.22:0,63,1121	0/0:22,0:21:57.20:0,57,1018	0/0:14,0:14:41.72:0,42,669	0/0:24,0:23:61.30:0,61,941	0/0:16,0:16:45.13:0,45,782	0/0:29,0:29:78.23:0,78,1305	1/1:10,6:16:11.31:91,11,0	0/0:18,0:18:51.11:0,51,885	0/0:32,0:32:5.29:0,5,171	0/0:29,0:29:73.79:0,74,1273	0/0:19,0:19:54.06:0,54,687	0/0:19,0:19:45.15:0,45,817	0/0:52,0:49:99:0,111,1954	0/0:16,0:16:38.12:0,38,683	0/0:21,0:21:51.17:0,51,888	0/0:43,0:43:99:0,114,1973	1/1:8,9:17:15.04:185,15,0	1/1:13,4:17:26.14:518,26,0	1/1:2,13:15:26.92:342,27,0	1/1:3,0:3:6.19:34,6,0
chr10	2824669	.	TGCGTGTGC	T	1928.32	PASS	AB=0.905;AC=12;AF=0.214;AN=56;BaseQRankSum=11.738;DP=623;FS=0.913;HRun=0;HaplotypeScore=169.0786;InbreedingCoeff=0.3664;MQ=54.02;MQ0=14;MQRankSum=0.505;QD=11.15;ReadPosRankSum=-3.436;VQSLOD=2.1579;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:41,0:41:20.83:720,21,0	0/0:8,0:8:18.06:0,18,513	0/1:10,0:6:14.55:15,0,58	0/0:13,0:10:8.03:0,8,233	0/0:23,0:23:28.87:0,29,860	0/0:30,0:30:58.18:0,58,1732	0/0:29,0:27:47.27:0,47,1660	0/1:14,0:11:9.14:131,0,9	0/0:30,0:29:59.98:0,60,1566	0/0:20,0:19:56.09:0,56,1226	0/0:12,0:12:36.09:0,36,632	0/0:22,0:21:35.18:0,35,1364	0/0:17,0:17:45.11:0,45,1228	0/0:30,0:30:72:0,72,1568	1/1:19,0:20:10.33:166,10,0	0/0:20,0:20:52:0,52,1499	0/1:8,20:30:29.97:135,0,30	0/0:32,0:32:14.09:0,14,1519	0/0:15,0:14:26.01:0,26,387	0/0:20,0:20:52.86:0,53,1305	0/0:53,0:49:81.55:0,82,2282	0/0:14,0:14:28.88:0,29,837	0/0:20,0:20:51.04:0,51,871	0/0:42,0:42:99:0,99,2820	0/1:18,0:18:5.16:205,0,5	0/1:19,0:20:12.14:547,0,12	0/1:16,0:18:76.25:128,0,76	1/1:2,0:2:5.69:43,6,0
chr10	2825271	.	TTATTCTATTA	T	2571.29	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.517;DP=548;FS=15.756;HRun=0;HaplotypeScore=159.3853;InbreedingCoeff=0.9958;MQ=87.99;MQ0=0;MQRankSum=-8.855;QD=69.49;ReadPosRankSum=1.733;VQSLOD=2.5858;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,25:27:57.20:1863,57,0	0/0:8,0:8:24.08:0,24,1272	0/0:24,0:24:66.19:0,66,2648	0/0:16,0:16:40.02:0,40,1609	0/0:23,0:23:66.23:0,66,3048	0/0:22,0:22:66.23:0,66,3426	0/0:7,0:7:21.06:0,21,792	0/0:37,0:37:99:0,99,4332	0/0:24,0:24:66.23:0,66,3394	0/0:33,0:33:93.31:0,93,4459	0/0:22,0:22:60.21:0,60,3026	0/0:13,0:13:39.13:0,39,1863	0/0:17,0:17:48.16:0,48,2239	0/0:17,0:17:42.13:0,42,1965	0/0:23,0:23:63.22:0,63,3221	0/0:17,0:17:51.18:0,51,2618	1/1:0,10:10:27.09:829,27,0	0/0:20,0:20:57.20:0,57,2883	0/0:10,0:10:30.10:0,30,1291	0/0:27,0:27:78.27:0,78,3509	0/0:12,0:12:36.12:0,36,1802	0/0:17,0:17:51.17:0,51,2344	0/0:20,0:20:51.16:0,51,2280	0/0:12,0:12:33.11:0,33,1631	0/0:21,0:20:60.21:0,60,2995	0/0:16,0:16:48.16:0,48,2370	0/0:31,0:31:90.31:0,90,4218	0/0:22,0:22:60.15:0,60,2521
chr10	2825326	.	TGCAGA	T	592.35	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.621;DP=666;FS=0.000;HRun=0;HaplotypeScore=127.8851;InbreedingCoeff=0.9827;MQ=90.66;MQ0=0;MQRankSum=-2.082;QD=45.57;ReadPosRankSum=0.705;VQSLOD=3.7206;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:96.33:0,96,2970	0/0:10,0:10:27.09:0,27,838	0/0:33,0:33:96.32:0,96,2773	0/0:20,0:20:51.99:0,52,1235	0/0:28,0:28:84.27:0,84,2490	0/0:23,0:23:60.21:0,60,1860	0/0:20,0:20:57.20:0,57,1766	0/0:15,0:15:39.13:0,39,1100	0/0:28,0:28:81.26:0,81,2428	0/0:35,0:35:99:0,102,2971	0/0:29,0:29:81.28:0,81,2420	0/0:16,0:16:48.16:0,48,1423	0/0:22,0:22:66.23:0,66,2022	0/0:22,0:22:57.16:0,57,1632	0/0:29,0:29:78.27:0,78,2329	0/0:27,0:27:75.26:0,75,2317	1/1:1,12:13:33.11:687,33,0	0/0:23,0:23:69.19:0,69,2043	0/0:10,0:10:30.10:0,30,930	0/0:43,0:43:99:0,126,3838	0/0:30,0:30:90.29:0,90,2657	0/0:25,0:25:75.26:0,75,2285	0/0:20,0:20:60.21:0,60,1774	0/0:13,0:13:39.13:0,39,1209	0/0:28,0:28:84.28:0,84,2532	0/0:28,0:28:81.27:0,81,2363	0/0:34,0:33:87.20:0,87,2625	0/0:6,0:6:15.05:0,15,465
chr10	2826720	.	AT	A	3183.88	PASS	AB=0.917;AC=17;AF=0.304;AN=56;BaseQRankSum=12.991;DP=479;FS=4.086;HRun=11;HaplotypeScore=56.5824;InbreedingCoeff=0.9174;MQ=70.47;MQ0=0;MQRankSum=1.484;QD=17.40;ReadPosRankSum=2.292;VQSLOD=4.8672;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,24:29:74.80:602,75,0	0/0:10,0:10:21.05:0,21,224	0/0:9,0:9:5.53:0,6,132	0/0:10,0:9:6.33:0,6,64	0/0:21,1:22:26.43:0,26,473	0/0:24,0:24:60.14:0,60,633	0/0:14,0:14:33.04:0,33,340	1/1:4,26:30:74.87:607,75,0	0/0:16,0:16:39.09:0,39,410	0/0:20,1:21:26.46:0,26,471	0/0:23,1:24:38.51:0,39,609	0/0:12,0:12:33.06:0,33,343	0/0:15,0:15:36.09:0,36,384	0/0:16,0:16:42.94:0,43,425	1/1:2,15:17:35.95:296,36,0	0/0:13,0:13:30.08:0,30,320	1/1:2,14:16:35.96:295,36,0	0/0:21,0:21:49.19:0,49,518	0/0:23,0:23:36.97:0,37,520	0/0:14,0:14:38.99:0,39,399	0/0:11,0:11:24.06:0,24,256	0/1:10,1:11:0.58:1,0,200	0/0:14,0:14:39.08:0,39,408	0/0:6,0:6:18.05:0,18,192	1/1:1,19:20:44.95:369,45,0	1/1:3,20:23:30.91:454,31,0	1/1:3,19:22:50.93:419,51,0	1/1:1,14:15:41.95:345,42,0
chr10	2827412	.	CT	C	1606.49	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.428;DP=643;FS=14.505;HRun=4;HaplotypeScore=60.6509;InbreedingCoeff=0.9996;MQ=81.26;MQ0=0;MQRankSum=-1.546;QD=31.50;ReadPosRankSum=3.111;VQSLOD=2.7500;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:54.18:0,54,756	0/0:11,0:11:33.11:0,33,461	0/0:20,0:20:51.15:0,51,665	0/0:26,0:26:59.05:0,59,714	0/0:30,0:30:90.29:0,90,1244	0/0:36,0:36:99:0,105,1469	0/0:24,0:24:69.23:0,69,966	0/0:39,0:39:99:0,108,1512	0/0:19,0:19:51.17:0,51,714	0/0:26,0:26:72.23:0,72,993	0/0:21,0:21:63.20:0,63,865	0/0:20,0:20:54.15:0,54,708	0/0:21,0:21:63.21:0,63,880	0/0:14,0:14:36.12:0,36,501	1/1:1,22:23:63.19:756,63,0	0/0:27,0:27:81.27:0,81,1133	0/0:16,0:16:39.12:0,39,530	0/0:12,0:12:33.08:0,33,426	0/0:30,0:30:90.29:0,90,1244	0/0:31,0:31:93.31:0,93,1302	0/0:20,0:20:57.19:0,57,796	0/0:22,0:22:57.19:0,57,789	0/0:25,0:25:72.24:0,72,1006	0/0:13,0:13:39.13:0,39,546	1/1:0,28:28:81.25:972,81,0	0/0:32,0:32:90.30:0,90,1261	0/0:23,0:23:66.18:0,66,886	0/0:16,0:16:48.16:0,48,672
chr10	2827795	.	AT	A	1029.61	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=3.105;DP=552;FS=8.930;HRun=7;HaplotypeScore=71.5251;InbreedingCoeff=0.9926;MQ=70.34;MQ0=1;MQRankSum=-4.176;QD=22.88;ReadPosRankSum=1.213;VQSLOD=3.3883;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,20:21:54.08:540,54,0	0/0:7,0:7:21.01:0,21,245	0/0:14,0:13:29.99:0,30,328	0/0:11,0:10:24.08:0,24,302	0/0:22,0:22:60.18:0,60,742	0/0:22,0:22:57.17:0,57,706	0/0:19,0:19:54.17:0,54,679	0/0:37,0:37:87.26:0,87,1069	0/0:21,0:21:57.18:0,57,716	0/0:38,0:38:99:0,108,1350	0/0:28,0:28:78.24:0,78,969	0/0:18,0:18:51.16:0,51,641	0/0:18,0:18:45.14:0,45,566	0/0:15,0:15:39.04:0,39,453	0/0:18,0:18:48.15:0,48,603	0/0:13,0:13:39.12:0,39,490	1/1:1,23:24:60.13:612,60,0	0/0:10,0:10:26.64:0,27,294	0/0:27,0:27:75.24:0,75,943	0/0:26,0:26:75.24:0,75,942	0/0:8,0:8:21.07:0,21,264	0/0:13,0:13:39.12:0,39,490	0/0:17,0:17:51.16:0,51,641	0/0:11,0:11:33.06:0,33,396	0/0:26,0:26:72.23:0,72,905	0/0:28,0:28:78.24:0,78,971	0/0:30,0:30:90.26:0,90,1097	0/0:10,0:10:24.08:0,24,301
chr10	2827812	.	C	CA	6298.68	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-15.482;DP=574;FS=18.438;HRun=1;HaplotypeScore=58.5362;InbreedingCoeff=0.9988;MQ=75.56;MQ0=1;MQRankSum=-2.115;QD=39.87;ReadPosRankSum=-1.424;VQSLOD=2.6853;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:48.16:0,48,623	0/0:8,0:8:24.08:0,24,311	0/0:18,0:17:42.98:0,43,470	0/0:13,0:12:33.11:0,33,419	0/0:25,0:25:72.23:0,72,934	0/0:18,0:18:48.16:0,48,621	0/0:21,0:21:60.18:0,60,764	1/1:2,33:35:99:1442,99,0	0/0:19,0:19:57.19:0,57,740	0/0:42,0:42:99:0,120,1529	0/0:26,0:26:69.22:0,69,896	0/0:17,0:17:48.16:0,48,623	0/0:18,0:18:54.18:0,54,701	0/0:14,0:14:42.14:0,42,545	1/1:0,17:17:48.16:714,48,0	0/0:16,0:16:42.14:0,42,545	0/0:23,0:23:66.18:0,66,838	0/0:11,0:11:33.11:0,33,428	0/0:28,0:28:81.25:0,81,1039	0/0:27,0:27:81.25:0,81,1036	0/0:8,0:8:24.08:0,24,311	0/0:16,0:16:45.15:0,45,583	0/0:20,0:20:54.18:0,54,701	0/0:10,0:10:30.10:0,30,389	1/1:3,27:30:72.24:1079,72,0	1/1:2,30:32:51.34:1265,51,0	1/1:2,32:34:90.30:1348,90,0	1/1:0,10:10:30.10:450,30,0
chr10	2827892	.	CAT	C	1239.64	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.779;DP=591;FS=0.000;HRun=0;HaplotypeScore=70.4892;InbreedingCoeff=0.9639;MQ=77.08;MQ0=0;MQRankSum=-3.658;QD=36.46;ReadPosRankSum=2.358;VQSLOD=5.5042;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,18:18:48.16:699,48,0	0/0:11,0:11:33.11:0,33,611	0/0:17,0:17:51.17:0,51,935	0/0:14,0:14:10.75:0,11,520	0/0:29,0:29:78.27:0,78,1446	0/0:22,0:22:57.20:0,57,1067	0/0:19,0:19:57.20:0,57,1047	0/0:34,0:34:96.33:0,96,1782	0/0:25,0:25:75.26:0,75,1392	0/0:33,0:33:96.31:0,96,1731	0/0:25,0:25:75.24:0,75,1352	0/0:23,0:23:63.22:0,63,1168	0/0:15,0:15:45.15:0,45,843	0/0:16,0:16:45.15:0,45,843	0/0:18,0:18:54.19:0,54,1011	0/0:22,0:22:66.23:0,66,1226	1/1:1,15:16:45.15:663,45,0	0/0:15,0:15:42.14:0,42,774	0/0:22,0:22:66.20:0,66,1150	0/0:24,0:24:69.24:0,69,1264	0/0:14,0:14:42.14:0,42,786	0/0:20,0:20:60.17:0,60,1051	0/0:28,0:28:81.26:0,81,1469	0/0:6,0:6:12.04:0,12,225	0/0:27,0:27:69.24:0,69,1275	0/0:33,0:33:96.33:0,96,1772	0/0:34,0:34:99:0,99,1815	0/0:11,0:11:30.10:0,30,562
chr10	2828121	.	ATCTCTCTCTCTC	A	496	PASS	AB=0.949;AC=9;AF=0.225;AN=40;BaseQRankSum=3.227;DP=487;FS=6.703;HRun=0;HaplotypeScore=153.6553;InbreedingCoeff=0.2713;MQ=66.47;MQ0=28;MQRankSum=-1.888;QD=5.17;ReadPosRankSum=1.408;VQSLOD=2.0467;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:18,1:20:0:0,0,0	./.	./.	0/0:32,0:20:0.89:0,1,2	./.	0/0:25,0:23:0:0,0,0	0/0:18,0:17:12.04:0,12,221	0/0:37,0:36:3.90:0,4,40	0/0:10,0:10:9.03:0,9,227	0/0:26,0:26:9.03:0,9,202	0/0:18,0:17:3.01:0,3,75	0/0:12,0:11:3.88:0,4,27	0/0:6,0:5:3.01:0,3,67	./.	0/0:14,0:14:3.01:0,3,35	0/0:11,0:11:2.83:0,3,76	0/1:22,0:21:18.67:19,0,141	0/1:12,0:8:8.30:8,0,41	0/0:15,0:14:6.49:0,6,213	./.	0/0:23,0:22:3.01:0,3,50	1/1:10,0:10:2.50:9,2,0	./.	0/0:18,0:16:6.02:0,6,202	./.	1/1:11,1:16:12.04:377,12,0	1/1:10,3:11:6.02:193,6,0	./.
chr10	2828852	.	T	TG	1563.21	PASS	AB=1.000;AC=10;AF=0.179;AN=56;BaseQRankSum=2.744;DP=565;FS=1.508;HRun=1;HaplotypeScore=81.6816;InbreedingCoeff=0.7192;MQ=74.59;MQ0=3;MQRankSum=3.428;QD=10.78;ReadPosRankSum=-0.959;VQSLOD=1.2242;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:43.88:0,44,246	0/0:12,0:12:33.06:0,33,372	0/1:40,0:24:8.15:8,0,164	0/1:39,0:21:18.27:18,0,114	0/0:27,1:28:75.44:0,75,782	0/0:20,0:20:60.11:0,60,695	0/0:18,0:18:39.58:0,40,477	1/1:6,23:29:72.90:844,73,0	0/0:15,0:15:42.54:0,43,472	0/0:22,0:22:59.13:0,59,636	0/0:18,0:18:48.09:0,48,541	0/0:28,0:28:80.79:0,81,909	0/0:16,0:16:37.59:0,38,436	0/0:15,0:15:44.10:0,44,464	0/0:14,0:14:35.96:0,36,298	0/0:13,0:13:31.75:0,32,362	0/0:39,0:41:60.04:0,60,301	0/0:15,0:15:32.64:0,33,393	0/0:21,0:21:53.85:0,54,596	0/0:27,0:27:69.50:0,70,775	0/0:8,0:8:14.37:0,14,227	0/0:16,0:16:43.47:0,43,462	0/0:21,0:21:53.21:0,53,577	0/0:15,0:15:27.67:0,28,324	0/0:14,0:14:35.98:0,36,313	1/1:18,0:17:50.93:487,51,0	1/1:16,0:16:36.67:334,37,0	1/1:1,0:1:3.01:30,3,0
chr10	2828853	.	G	GGT	2167.16	PASS	AB=0.737;AC=11;AF=0.196;AN=56;BaseQRankSum=3.521;DP=563;FS=3.821;HRun=0;HaplotypeScore=89.0798;InbreedingCoeff=0.5969;MQ=75.39;MQ0=3;MQRankSum=1.005;QD=12.82;ReadPosRankSum=-0.665;VQSLOD=3.2843;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:10,0:23:12.07:12,0,115	0/0:11,0:11:33.08:0,33,442	0/1:40,0:25:5.02:5,0,186	0/0:40,0:21:0.37:0,0,144	0/0:27,0:29:75.54:0,76,998	0/0:19,0:20:60.13:0,60,831	0/0:16,0:18:50.10:0,50,635	1/1:26,1:27:61.87:511,62,0	0/0:14,0:15:42.56:0,43,545	0/0:17,0:22:65.06:0,65,783	0/0:18,0:18:48.06:0,48,625	0/0:28,0:28:80.17:0,80,1086	0/0:15,0:16:20.98:0,21,508	0/0:15,0:15:43.91:0,44,563	0/0:2,0:14:36.09:0,36,377	0/0:11,0:13:35.57:0,36,429	0/1:10,0:40:70.51:302,0,71	0/0:11,0:14:38.56:0,39,506	0/0:18,0:19:32.39:0,32,715	0/0:26,0:27:73.22:0,73,926	0/0:8,0:8:23.43:0,23,311	0/0:16,0:16:44.88:0,45,566	0/0:20,0:22:59.31:0,59,718	0/0:11,0:15:37.96:0,38,407	0/0:5,0:14:36.03:0,36,376	1/1:0,18:18:51.09:760,51,0	1/1:1,14:16:34.26:678,34,0	1/1:0,1:2:3.01:60,3,0
chr10	2829291	.	CT	C	1658.56	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=6.379;DP=587;FS=4.870;HRun=10;HaplotypeScore=66.4853;InbreedingCoeff=0.9470;MQ=64.31;MQ0=0;MQRankSum=0.219;QD=21.26;ReadPosRankSum=-1.650;VQSLOD=4.1527;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:11.06:0,11,578	0/0:11,0:11:27.07:0,27,299	0/0:13,0:10:21:0,21,217	0/0:10,0:6:7:0,7,49	0/0:32,0:34:92.92:0,93,991	0/0:28,0:29:81.04:0,81,870	0/0:19,0:19:51.12:0,51,555	1/1:6,19:25:56.96:491,57,0	0/0:12,0:13:38.93:0,39,405	0/0:28,1:29:52.06:0,52,778	0/0:23,0:23:60.15:0,60,650	0/0:24,1:25:46.12:0,46,728	0/0:17,0:17:45.12:0,45,498	0/0:17,0:17:39.09:0,39,416	0/0:24,0:24:22.06:0,22,463	0/0:16,1:17:19.07:0,19,439	0/0:30,0:31:81.01:0,81,853	0/0:20,0:20:57.13:0,57,619	0/0:15,0:15:33.09:0,33,365	0/0:27,0:27:69.18:0,69,760	0/0:15,0:15:33.08:0,33,357	0/0:15,2:17:16.08:0,16,405	0/0:30,0:30:75.20:0,75,829	0/0:16,0:17:20.25:0,20,391	0/0:26,1:28:11.01:0,11,557	1/1:0,21:21:62.99:547,63,0	1/1:1,22:23:62.89:547,63,0	1/1:0,9:9:26.99:234,27,0
chr10	2829304	.	C	CT	2391.99	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-9.670;DP=587;FS=7.357;HRun=9;HaplotypeScore=64.3731;InbreedingCoeff=0.9869;MQ=67.66;MQ0=0;MQRankSum=-0.654;QD=22.36;ReadPosRankSum=1.631;VQSLOD=4.5529;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,19:28:31.11:571,31,0	0/0:10,0:10:23.99:0,24,208	0/0:19,0:16:30.13:0,30,262	0/0:12,0:9:12.75:0,13,105	0/0:34,0:34:80.95:0,81,697	0/0:28,0:29:80.02:0,80,682	0/0:18,0:18:50.97:0,51,438	0/0:21,0:21:53.95:0,54,459	0/0:15,0:15:38.96:0,39,335	0/0:31,0:31:74.94:0,75,645	0/0:21,0:21:47.97:0,48,417	0/0:23,0:23:50.98:0,51,443	0/0:17,0:17:41.96:0,42,361	0/0:15,0:15:41.96:0,42,359	1/1:2,18:20:45.12:498,45,0	0/0:15,0:15:44.99:0,45,391	1/1:3,28:31:35.13:844,35,0	0/0:25,0:25:68.98:0,69,599	0/0:15,0:15:38.98:0,39,335	0/0:24,0:25:55.94:0,56,466	0/0:12,0:12:32.93:0,33,276	0/0:19,0:19:47.78:0,48,395	0/0:27,0:27:65.93:0,66,565	0/0:18,0:18:14.67:0,15,337	1/1:5,23:28:60.08:639,60,0	0/0:22,0:22:53.98:0,54,469	0/0:23,0:23:62.95:0,63,539	0/0:13,0:12:35.99:0,36,313
chr10	2829655	.	C	CATGT	547.12	PASS	AB=1.000;AC=8;AF=0.154;AN=52;BaseQRankSum=0.867;DP=661;FS=18.828;HRun=0;HaplotypeScore=118.6298;InbreedingCoeff=0.6579;MQ=65.23;MQ0=7;MQRankSum=0.299;QD=4.48;ReadPosRankSum=-0.809;VQSLOD=1.1729;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:26:15.02:191,15,0	0/1:7,0:11:0.38:0,0,105	./.	./.	0/0:27,0:27:39.10:0,39,556	0/0:25,0:25:36.10:0,36,526	0/0:19,0:19:24.05:0,24,319	1/1:20,0:31:8.88:59,9,0	0/0:26,0:26:17.10:0,17,368	0/0:36,0:36:45.15:0,45,675	0/0:23,0:23:39.13:0,39,596	0/0:16,0:16:21.07:0,21,316	0/0:19,0:19:36.11:0,36,526	0/0:21,0:21:27.09:0,27,411	0/0:13,0:13:6.01:0,6,61	0/0:12,0:13:15.04:0,15,208	0/0:37,0:37:2.99:0,3,24	0/0:33,0:33:24.60:0,25,761	0/1:26,0:25:7.95:8,0,193	1/1:11,15:26:18.06:424,18,0	0/0:18,0:18:36.11:0,36,522	0/0:22,0:22:36.11:0,36,523	0/0:35,0:35:57.16:0,57,832	0/0:26,0:26:36.12:0,36,554	0/0:25,0:25:9.01:0,9,85	0/0:26,0:26:56.84:0,57,805	0/0:31,0:30:54.17:0,54,794	0/0:10,0:9:12.04:0,12,179
chr10	2829674	.	GTATGTATGTATGTATGTATGTATA	G	585.34	PASS	AB=1.000;AC=5;AF=0.093;AN=54;BaseQRankSum=4.947;DP=640;FS=8.077;HRun=0;HaplotypeScore=338.4957;InbreedingCoeff=0.6249;MQ=58.05;MQ0=13;MQRankSum=-3.876;QD=7.50;ReadPosRankSum=2.385;VQSLOD=0.5238;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:21.03:0,21,315	0/0:10,0:10:22.94:0,23,1034	0/0:18,0:9:2.84:0,3,14	./.	0/0:28,0:28:69.22:0,69,4573	0/0:22,0:22:48.15:0,48,3140	0/0:13,0:13:36.09:0,36,1551	0/0:34,0:30:56.97:0,57,1190	0/0:19,0:19:39.13:0,39,2275	0/0:33,0:33:66.19:0,66,5255	0/0:26,0:26:66.20:0,66,5289	0/0:17,0:17:42.13:0,42,2272	0/0:18,0:18:42.13:0,42,2836	0/0:16,0:16:30.10:0,30,2524	0/1:14,0:14:15.90:166,0,16	0/0:12,0:12:27.06:0,27,1751	1/1:12,28:40:3.42:190,3,0	0/0:38,0:38:99:0,100,6078	0/0:24,0:21:39.12:0,39,2477	0/0:34,0:33:39.81:0,40,3503	0/0:19,0:19:51.17:0,51,3746	0/0:19,0:19:45.63:0,46,3079	0/0:32,0:32:78.25:0,78,6001	0/0:27,0:27:57.20:0,57,4698	1/1:24,0:23:12.04:342,12,0	0/0:25,0:25:66.23:0,66,5218	0/0:33,0:32:81.24:0,81,5936	0/0:9,0:8:15.05:0,15,924
chr10	2829678	.	GTATGTATGTATGTATGTATA	G	1057.15	PASS	AB=1.000;AC=7;AF=0.130;AN=54;BaseQRankSum=5.483;DP=634;FS=2.391;HRun=0;HaplotypeScore=285.0947;InbreedingCoeff=0.6822;MQ=57.51;MQ0=16;MQRankSum=-1.550;QD=10.26;ReadPosRankSum=1.346;VQSLOD=2.3934;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:25:89.11:98,0,89	0/0:10,0:10:27.06:0,27,943	0/0:15,0:7:2.04:0,2,6	./.	0/0:27,0:27:57.18:0,57,3375	0/0:22,0:22:42.10:0,42,2247	0/0:13,0:13:27.08:0,27,858	0/0:37,0:32:53.97:0,54,921	0/0:18,0:18:42.07:0,42,1540	0/0:32,0:32:72.18:0,72,4153	0/0:26,0:26:60.19:0,60,4151	0/0:17,0:17:36.09:0,36,1548	0/0:18,0:18:36.12:0,36,2070	0/0:14,0:14:27.09:0,27,1956	1/1:3,12:15:6.02:316,6,0	0/0:10,0:10:21.06:0,21,1357	1/1:39,0:39:3.26:144,3,0	0/0:38,0:38:94.09:0,94,4353	0/0:24,0:20:36.01:0,36,1957	0/0:34,0:33:39.81:0,40,2824	0/0:20,0:20:51.14:0,51,2832	0/0:17,0:17:42.60:0,43,2313	0/0:31,0:31:75.24:0,75,4642	0/0:26,0:26:57.18:0,57,3698	1/1:7,17:23:12.04:626,12,0	0/0:24,0:24:63.20:0,63,3923	0/0:34,0:33:78.24:0,78,4553	0/0:9,0:8:14.98:0,15,665
chr10	2833116	.	CCTCCGA	C	7534.80	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=12.563;DP=566;FS=6.396;HRun=0;HaplotypeScore=125.2674;InbreedingCoeff=0.9804;MQ=85.52;MQ0=0;MQRankSum=-14.969;QD=55.00;ReadPosRankSum=0.126;VQSLOD=4.9161;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,29:30:72.25:1678,72,0	0/0:14,0:14:39.13:0,39,1341	0/0:28,0:28:72.18:0,72,2144	0/0:28,0:28:39.66:0,40,2341	0/0:18,0:18:48.16:0,48,1569	0/0:24,0:24:66.23:0,66,2260	0/0:23,0:23:66.23:0,66,2328	1/1:7,29:36:84.29:1958,84,0	0/0:23,0:23:63.20:0,63,2094	0/0:17,0:17:45.15:0,45,1583	0/0:16,0:16:42.14:0,42,1484	0/0:21,0:21:60.21:0,60,2096	0/0:17,0:17:45.15:0,45,1565	0/0:19,0:19:57.20:0,57,1947	1/1:1,13:14:33.11:769,33,0	0/0:20,0:20:57.20:0,57,1972	0/0:15,0:15:42.14:0,42,1475	0/0:9,0:9:27.09:0,27,948	0/0:16,0:16:36.12:0,36,1231	0/0:17,0:17:48.16:0,48,1694	0/0:33,0:33:90.31:0,90,3148	0/0:28,0:28:75.25:0,75,2508	0/0:18,0:18:48.16:0,48,1605	0/0:25,0:25:72.25:0,72,2516	1/1:1,15:16:39.13:909,39,0	1/1:4,19:23:57.20:1312,57,0	1/1:1,15:16:33.11:769,33,0	1/1:0,2:2:6.02:140,6,0
chr10	2834681	.	GAGACAGAC	G	3116.57	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=8.715;DP=858;FS=2.541;HRun=0;HaplotypeScore=202.8685;InbreedingCoeff=0.9310;MQ=57.37;MQ0=22;MQRankSum=-4.052;QD=24.93;ReadPosRankSum=-0.951;VQSLOD=2.9308;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:46:56.17:0,56,1588	0/0:19,0:19:42.14:0,42,1485	0/0:38,0:9:9.02:0,9,246	0/0:43,0:24:39.13:0,39,892	0/0:41,0:42:93.26:0,93,3119	0/0:23,0:24:48.13:0,48,1464	0/0:22,0:22:60.19:0,60,1998	1/1:19,14:26:29.71:396,30,0	0/0:21,0:20:39.13:0,39,1545	0/0:39,0:40:93.27:0,93,3123	0/0:27,0:29:60.18:0,60,2142	0/0:18,0:18:39.13:0,39,1370	0/0:27,0:27:63.20:0,63,2128	0/0:22,0:22:45.15:0,45,1578	0/0:8,0:26:17.88:0,18,546	0/0:26,0:26:57.18:0,57,2161	0/0:23,0:23:39.11:0,39,1021	0/0:18,0:18:33.58:0,34,1086	0/0:28,0:28:45.14:0,45,1472	0/0:43,0:43:87.28:0,87,2930	0/0:64,0:64:99:0,111,3948	0/0:18,0:17:36.12:0,36,1382	0/0:31,0:31:54.19:0,54,2014	0/0:29,0:31:63.19:0,63,2136	0/0:11,0:31:36.12:0,36,1147	1/1:7,24:31:64.91:1254,65,0	1/1:12,36:50:60.21:1540,60,0	1/1:2,9:11:3.01:77,3,0
chr10	2834709	.	C	CAGAG	1601.27	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=3.550;DP=757;FS=1.364;HRun=0;HaplotypeScore=138.0407;InbreedingCoeff=0.3349;MQ=64.03;MQ0=7;MQRankSum=0.662;QD=13.69;ReadPosRankSum=2.270;VQSLOD=3.1664;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:38,0:38:99:553,0,204	0/0:17,0:17:48.08:0,48,710	0/0:35,0:22:48.95:0,49,587	0/0:36,0:27:52.21:0,52,575	0/0:33,0:33:99:0,99,1495	0/0:17,0:17:45.07:0,45,636	0/0:24,0:24:63.12:0,63,928	0/0:31,0:24:53.96:0,54,470	0/0:24,0:23:60.08:0,60,847	0/0:34,0:34:93.13:0,93,1433	0/0:25,0:25:61.20:0,61,1064	0/0:14,0:14:42.10:0,42,658	0/0:27,0:27:75.10:0,75,1063	0/0:17,0:17:45.07:0,45,671	0/1:27,0:27:99:203,0,137	0/0:24,0:24:72.15:0,72,1115	1/1:5,15:20:21.07:553,21,0	0/0:14,0:14:35.69:0,36,492	0/0:24,0:24:59.27:0,59,795	0/0:37,0:37:96.15:0,96,1385	0/0:47,0:47:99:0,117,1782	0/0:20,0:20:54.06:0,54,745	0/0:22,0:22:63.14:0,63,982	0/0:30,0:30:72.09:0,72,1052	0/1:32,0:32:99:416,0,170	0/0:27,0:27:60.32:0,60,564	0/0:48,0:47:92.22:0,92,903	0/0:13,0:13:14.30:0,14,108
chr10	2835362	.	C	CA	2988.33	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-11.105;DP=649;FS=0.000;HRun=8;HaplotypeScore=63.8955;InbreedingCoeff=0.9981;MQ=76.52;MQ0=0;MQRankSum=-0.626;QD=23.91;ReadPosRankSum=0.307;VQSLOD=4.1815;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:90.03:0,90,818	0/0:11,0:11:27.01:0,27,247	0/0:28,0:29:23.80:0,24,355	0/0:24,0:22:38.44:0,38,322	0/0:29,0:29:72.01:0,72,654	1/1:3,19:22:54.16:623,54,0	1/1:2,10:12:27.08:312,27,0	1/1:6,17:23:51.15:587,51,0	0/0:26,0:26:60.01:0,60,549	0/0:32,0:32:81.04:0,81,741	0/0:24,0:24:69:0,69,620	0/0:18,0:18:45.02:0,45,412	0/0:18,0:18:51.03:0,51,466	0/0:20,0:20:57.03:0,57,522	0/0:28,0:28:66:0,66,595	0/0:18,0:18:45:0,45,405	0/0:26,0:26:75.02:0,75,681	0/0:16,0:16:39.02:0,39,357	0/0:18,0:18:45.01:0,45,407	0/0:42,0:42:99:0,99,906	0/0:23,0:23:62.99:0,63,568	0/0:24,1:25:31.38:0,31,535	0/0:27,0:27:75.04:0,75,686	0/0:15,0:15:29.38:0,29,344	0/0:23,0:23:63.03:0,63,577	1/1:7,22:29:38.68:685,39,0	1/1:7,24:31:63.19:727,63,0	1/1:1,7:8:21.06:242,21,0
chr10	2836333	.	G	GA	1531.97	PASS	AB=0.579;AC=5;AF=0.089;AN=56;BaseQRankSum=-4.503;DP=537;FS=16.519;HRun=7;HaplotypeScore=51.1622;InbreedingCoeff=0.7573;MQ=57.84;MQ0=8;MQRankSum=1.263;QD=24.32;ReadPosRankSum=2.330;VQSLOD=2.3773;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:9,24:33:8.55:755,0,9	0/0:5,0:5:15.02:0,15,145	0/0:13,0:4:6:0,6,58	0/0:21,0:6:15.02:0,15,143	0/0:31,0:31:78.06:0,78,743	0/0:20,0:20:57.09:0,57,550	0/0:6,0:6:15.02:0,15,145	0/0:26,0:24:48.05:0,48,460	0/0:12,0:12:33.05:0,33,319	0/0:29,0:29:84.14:0,84,811	0/0:31,0:31:72.08:0,72,688	0/0:11,0:11:30.05:0,30,290	0/0:8,0:8:18.02:0,18,174	0/0:17,0:17:37.49:0,37,398	1/1:2,18:20:48.03:580,48,0	0/0:15,0:15:42.07:0,42,406	0/0:27,0:27:68.91:0,69,651	0/0:21,0:21:51.05:0,51,485	0/0:25,0:23:66.11:0,66,637	0/0:21,0:21:57.08:0,57,545	0/0:12,0:12:30.04:0,30,290	0/0:19,0:19:54.09:0,54,521	0/0:19,0:19:57.09:0,57,550	0/0:14,0:14:33.03:0,33,319	1/1:1,9:10:27.08:326,27,0	0/0:27,0:27:75.12:0,75,724	0/0:28,0:28:84.14:0,84,810	0/0:16,0:16:42.06:0,42,405
chr10	2837686	.	G	GGGAT	7748.75	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=7.318;DP=752;FS=2.802;HRun=0;HaplotypeScore=117.6299;InbreedingCoeff=0.9912;MQ=58.72;MQ0=10;MQRankSum=-0.805;QD=52.36;ReadPosRankSum=0.703;VQSLOD=6.0932;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,23:36:57.20:1462,57,0	0/0:10,0:10:24.07:0,24,396	0/0:24,0:9:12.04:0,12,194	0/0:26,0:14:21.05:0,21,337	0/0:34,0:34:90.29:0,90,1549	0/0:26,0:26:75.26:0,75,1315	0/0:12,0:12:30.10:0,30,530	0/0:36,0:35:84.25:0,84,1369	0/0:28,0:28:72.21:0,72,1169	0/0:37,0:37:99:0,105,1828	0/0:23,0:23:63.21:0,63,1087	0/0:15,0:15:45.14:0,45,766	0/0:27,0:27:72.25:0,72,1272	0/0:22,0:22:66.23:0,66,1155	0/0:33,0:33:93.28:0,93,1606	0/0:30,0:30:84.27:0,84,1420	1/1:23,0:23:60.21:1538,60,0	0/0:16,0:15:39.07:0,39,626	0/0:23,0:20:54.18:0,54,913	0/0:41,0:41:99:0,114,2013	0/0:30,0:30:78.24:0,78,1321	0/0:31,0:31:84.27:0,84,1447	0/0:36,0:36:93.31:0,93,1603	0/0:33,0:32:78.21:0,78,1334	0/0:11,0:11:30.10:0,30,530	1/1:37,0:36:37.28:2003,37,0	1/1:30,0:31:78.27:1984,78,0	1/1:20,0:21:39.03:761,39,0
chr10	2837695	.	G	GGA	3193.80	PASS	AB=0.792;AC=7;AF=0.125;AN=56;BaseQRankSum=15.356;DP=720;FS=0.390;HRun=0;HaplotypeScore=97.2324;InbreedingCoeff=0.5032;MQ=56.80;MQ0=10;MQRankSum=1.243;QD=24.38;ReadPosRankSum=2.366;VQSLOD=4.0259;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:29:33.32:355,0,33	0/0:10,0:10:30.09:0,30,460	0/0:15,0:4:12.04:0,12,180	0/0:23,0:10:27.09:0,27,408	0/0:33,0:33:96.31:0,96,1530	0/0:27,0:27:81.28:0,81,1315	0/0:15,0:15:45.15:0,45,730	0/0:35,0:34:99:0,102,1607	0/0:24,0:24:72.23:0,72,1144	0/0:37,0:37:99:0,108,1762	0/0:24,0:24:66.23:0,66,1076	0/0:15,0:15:45.14:0,45,707	0/0:27,0:27:81.28:0,81,1316	0/0:22,0:22:66.23:0,66,1071	0/0:33,0:33:93.28:0,93,1487	0/0:30,0:30:90.31:0,90,1461	1/1:4,19:23:25.41:700,25,0	0/0:19,0:18:45.09:0,45,678	0/0:23,0:20:60.20:0,60,967	0/0:43,0:43:99:0,126,2049	0/0:30,0:30:90.29:0,90,1441	0/0:29,0:29:87.30:0,87,1408	0/0:31,0:31:93.32:0,93,1509	0/0:31,0:30:90.31:0,90,1464	0/0:11,0:11:33.11:0,33,525	0/1:11,24:34:99:994,0,111	1/1:2,24:26:38.12:940,38,0	0/1:13,5:18:99:347,0,136
chr10	2837698	.	T	TGG	2825.65	PASS	AB=0.665;AC=6;AF=0.107;AN=56;BaseQRankSum=12.432;DP=714;FS=0.000;HRun=1;HaplotypeScore=98.2816;InbreedingCoeff=0.6194;MQ=56.89;MQ0=7;MQRankSum=2.149;QD=28.54;ReadPosRankSum=0.940;VQSLOD=3.0628;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:45.10:0,45,238	0/0:9,0:9:27.08:0,27,415	0/0:15,0:5:12.04:0,12,195	0/0:22,0:8:12.02:0,12,246	0/0:31,0:31:93.29:0,93,1461	0/0:27,0:27:78.27:0,78,1268	0/0:15,0:15:45.15:0,45,733	0/0:34,0:33:96.30:0,96,1477	0/0:25,0:25:69.21:0,69,1074	0/0:37,0:37:99:0,111,1781	0/0:25,0:25:66.23:0,66,1070	0/0:15,0:15:45.13:0,45,685	0/0:28,0:28:84.26:0,84,1315	0/0:22,0:22:63.20:0,63,997	0/0:33,0:33:19.20:0,19,416	0/0:29,0:29:87.29:0,87,1393	1/1:4,19:23:47.29:742,47,0	0/0:18,0:17:48.04:0,48,697	0/0:24,0:22:60.19:0,60,955	0/0:43,0:43:99:0,129,2028	0/0:29,0:29:87.30:0,87,1418	0/0:31,0:31:90.29:0,90,1440	0/0:31,0:31:93.30:0,93,1491	0/0:31,0:30:90.31:0,90,1461	0/0:11,0:11:31.87:0,32,175	0/1:11,24:34:13.59:999,0,14	1/1:3,24:27:59.48:982,59,0	0/1:9,5:14:51.26:240,0,51
chr10	2838919	.	GTT	G	890.03	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=4.221;DP=593;FS=6.160;HRun=13;HaplotypeScore=82.3182;InbreedingCoeff=0.7484;MQ=68.12;MQ0=3;MQRankSum=0.803;QD=11.87;ReadPosRankSum=2.175;VQSLOD=2.6171;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:39:72.12:0,72,702	0/0:8,0:9:24.08:0,24,333	0/1:27,0:17:1.90:2,0,112	0/0:18,0:9:2.95:0,3,38	0/0:49,0:50:99:0,117,1598	0/0:15,0:17:32.59:0,33,428	0/0:8,0:9:17.55:0,18,226	0/0:7,1:29:25.14:0,25,186	0/0:19,0:20:45.15:0,45,635	0/0:29,0:29:75.71:0,76,1070	0/0:28,0:30:65.70:0,66,903	0/0:13,0:13:30.09:0,30,410	0/0:16,0:17:41.60:0,42,536	0/0:12,0:13:35.60:0,36,476	1/1:1,10:12:23.96:282,24,0	0/0:14,0:14:39.13:0,39,565	0/0:4,0:19:27.04:0,27,258	0/0:12,0:13:27.06:0,27,355	0/0:24,0:23:45.13:0,45,631	0/0:30,1:32:48.62:0,49,980	0/0:11,0:12:29.59:0,30,400	0/0:12,0:14:35.51:0,36,404	0/0:29,0:31:58.97:0,59,720	0/0:10,0:10:27.09:0,27,391	1/1:4,29:33:75.04:727,75,0	0/0:22,0:23:53.66:0,54,730	0/0:26,0:29:68.71:0,69,938	0/0:2,0:2:6.02:0,6,87
chr10	2839320	.	T	TA	685.08	PASS	AC=2;AF=0.038;AN=52;BaseQRankSum=-4.933;DP=558;FS=4.828;HRun=9;HaplotypeScore=64.7364;InbreedingCoeff=0.8466;MQ=54.16;MQ0=23;MQRankSum=2.109;QD=21.41;ReadPosRankSum=-1.441;VQSLOD=3.8954;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:28:68.32:0,68,575	0/0:14,0:14:41.56:0,42,343	./.	./.	0/0:32,0:32:57.97:0,58,633	0/0:23,0:23:50.97:0,51,438	0/0:6,0:6:17.98:0,18,153	0/0:29,0:26:62.93:0,63,536	0/0:8,0:8:21:0,21,182	0/0:20,0:20:50.97:0,51,441	0/0:25,0:24:62.47:0,62,529	0/0:19,0:19:50.98:0,51,443	0/0:15,0:15:14.52:0,15,288	0/0:15,0:15:35.99:0,36,313	0/0:22,0:22:62.94:0,63,538	0/0:16,0:16:47.59:0,48,401	1/1:4,27:32:72.15:779,72,0	0/0:18,0:17:50.97:0,51,438	0/0:21,0:12:29.97:0,30,260	0/0:35,0:34:86.92:0,87,743	0/0:14,0:13:35.96:0,36,308	0/0:17,0:17:38.97:0,39,338	0/0:25,0:25:62.08:0,62,513	0/0:8,1:7:21:0,21,182	0/0:20,0:19:56.99:0,57,495	0/0:25,0:23:65.99:0,66,573	0/0:23,0:23:62.87:0,63,528	0/0:12,1:13:4.19:0,4,257
chr10	2840997	.	G	GA	199.55	PASS	AC=10;AF=0.185;AN=54;BaseQRankSum=4.336;DP=454;FS=2.320;HRun=0;HaplotypeScore=49.9416;InbreedingCoeff=0.8613;MQ=58.36;MQ0=34;MQRankSum=-0.549;QD=10.50;ReadPosRankSum=-4.581;VQSLOD=2.5175;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:69.17:0,69,909	0/0:7,0:7:18.05:0,18,234	0/0:14,0:13:39.05:0,39,489	0/0:17,0:14:41.56:0,42,502	0/0:20,0:19:45.15:0,45,628	0/0:11,0:8:18.06:0,18,252	0/0:19,0:14:39.13:0,39,545	1/1:2,5:5:15.01:155,15,0	0/0:30,0:25:72.20:0,72,973	0/0:27,0:27:69.14:0,69,926	0/0:9,0:9:24.05:0,24,314	0/0:20,0:16:45.05:0,45,566	0/0:14,0:14:42.14:0,42,587	0/0:32,0:29:81.18:0,81,1087	1/1:2,0:2:1.85:16,2,0	0/0:15,0:14:36.12:0,36,503	0/0:26,0:24:63.17:0,63,856	0/0:23,0:16:48.16:0,48,671	0/0:26,0:18:54.18:0,54,755	0/0:16,0:16:25.96:0,26,605	0/0:32,0:23:59.99:0,60,838	0/0:7,0:6:15.05:0,15,210	0/0:15,0:14:39.09:0,39,521	0/0:30,0:29:87.29:0,87,1202	1/1:4,0:3:8.97:71,9,0	1/1:4,0:3:9:78,9,0	1/1:2,0:1:3:26,3,0	./.
chr10	2849296	.	TA	T	3765.37	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=11.407;DP=547;FS=0.816;HRun=4;HaplotypeScore=62.6117;InbreedingCoeff=0.9966;MQ=75.08;MQ0=1;MQRankSum=-0.095;QD=27.29;ReadPosRankSum=1.698;VQSLOD=2.8318;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:54.06:0,54,642	0/0:8,0:8:24.08:0,24,319	0/0:19,0:15:38.52:0,39,354	0/0:15,0:13:23.02:0,23,269	0/0:36,0:36:99:0,105,1247	0/0:28,0:28:72.18:0,72,874	0/0:15,0:15:39.12:0,39,506	1/1:2,22:24:66.13:735,66,0	0/0:16,0:16:45.12:0,45,568	0/0:27,0:27:78.21:0,78,964	0/0:32,0:32:68.98:0,69,889	0/0:14,0:14:42.14:0,42,559	0/0:13,0:13:39.10:0,39,482	0/0:16,0:16:45.13:0,45,571	1/1:0,23:23:48.15:571,48,0	0/0:25,0:25:69.19:0,69,864	0/0:14,0:14:39.07:0,39,483	0/0:12,0:12:33.02:0,33,396	0/0:20,0:20:51.09:0,51,619	0/0:24,0:24:69.19:0,69,871	0/0:10,0:10:27.09:0,27,359	0/0:19,0:19:50.99:0,51,636	0/0:20,0:20:38.05:0,38,589	0/0:7,0:7:21.07:0,21,280	1/1:0,20:20:45.14:536,45,0	1/1:5,20:25:20.07:565,20,0	1/1:1,34:35:87.27:1036,87,0	1/1:0,11:11:27.08:321,27,0
chr10	2851542	.	A	AAAC	2271.64	PASS	AB=0.989;AC=13;AF=0.241;AN=54;BaseQRankSum=6.740;DP=585;FS=12.455;HRun=0;HaplotypeScore=119.8829;InbreedingCoeff=0.5133;MQ=63.87;MQ0=1;MQRankSum=-7.633;QD=11.65;ReadPosRankSum=-3.405;VQSLOD=2.0266;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:28:2.65:3,0,168	0/0:12,0:12:30.08:0,30,373	./.	0/0:22,0:14:3:0,3,27	0/0:21,0:21:40.36:0,40,494	0/0:17,0:17:30.06:0,30,380	0/0:14,0:14:27.08:0,27,345	1/1:34,0:34:30.43:366,30,0	0/0:21,0:21:42.14:0,42,559	0/0:32,0:32:69.16:0,69,807	0/0:15,0:15:27.07:0,27,333	0/0:14,0:14:15.04:0,15,186	0/0:30,0:31:75.15:0,75,918	0/0:19,0:20:39.07:0,39,468	0/1:21,0:21:3.04:3,0,102	0/0:14,0:14:24.08:0,24,320	0/1:22,0:21:28.46:28,0,44	0/0:14,0:14:27.09:0,27,360	0/1:17,1:18:33.09:33,0,242	0/0:36,1:38:11.84:0,12,740	0/0:16,0:16:27.07:0,27,342	0/0:21,0:21:42.08:0,42,533	0/0:20,0:20:42.10:0,42,495	0/0:21,0:21:19.12:0,19,442	0/1:11,0:11:14.90:15,0,30	1/1:18,4:22:27.09:461,27,0	1/1:12,13:25:51.17:964,51,0	1/1:7,7:14:33.11:568,33,0
chr10	2851556	.	AC	A	1027.05	PASS	AB=0.613;AC=4;AF=0.071;AN=56;BaseQRankSum=9.091;DP=636;FS=2.754;HRun=1;HaplotypeScore=105.5972;InbreedingCoeff=0.4689;MQ=54.73;MQ0=4;MQRankSum=-6.528;QD=19.02;ReadPosRankSum=0.506;VQSLOD=3.9197;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:56.72:0,57,661	0/0:12,0:12:36.12:0,36,565	0/0:26,0:19:23.10:0,23,625	0/0:33,3:12:27.56:0,28,385	0/0:30,0:30:86.14:0,86,1227	0/0:21,0:21:63.20:0,63,930	0/0:15,0:15:45.15:0,45,703	0/0:34,0:33:99:0,99,1424	0/0:26,0:26:78.25:0,78,1179	0/0:33,0:33:99:0,99,1504	0/0:19,0:19:54.18:0,54,820	0/0:14,0:14:39.13:0,39,587	0/0:31,0:31:91.86:0,92,1415	0/0:20,0:20:55.74:0,56,835	0/1:4,13:19:42.76:410,0,43	0/0:16,0:16:48.12:0,48,691	1/1:7,15:22:19.59:489,20,0	0/0:15,0:15:41.50:0,42,603	0/0:18,0:18:52.69:0,53,731	0/0:40,0:40:99:0,119,1747	0/0:18,0:18:51.12:0,51,717	0/0:20,0:20:57.16:0,57,848	0/0:25,0:25:75.17:0,75,1116	0/0:20,0:20:60.20:0,60,907	0/1:6,5:12:14.76:242,0,15	0/0:20,0:20:60.13:0,60,773	0/0:28,0:28:81.16:0,81,912	0/0:14,0:14:42.10:0,42,496
chr10	2851568	.	AC	A	1226.50	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=10.488;DP=656;FS=10.993;HRun=1;HaplotypeScore=107.7824;InbreedingCoeff=0.9986;MQ=54.67;MQ0=12;MQRankSum=-8.939;QD=27.87;ReadPosRankSum=0.669;VQSLOD=2.3480;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,1:31:26.98:0,27,706	0/0:12,0:12:36.12:0,36,565	0/0:45,0:22:62.93:0,63,803	0/0:43,0:15:26.03:0,26,422	0/0:30,0:30:87.74:0,88,1280	0/0:22,0:22:66.22:0,66,991	0/0:16,0:16:48.15:0,48,726	0/0:33,0:32:96.31:0,96,1386	0/0:23,0:23:69.22:0,69,1052	0/0:37,0:37:99:0,111,1650	0/0:19,0:19:57.19:0,57,864	0/0:13,0:13:39.11:0,39,567	0/0:33,0:33:97.86:0,98,1473	0/0:19,0:19:52.73:0,53,792	1/1:3,12:15:44.80:446,45,0	0/0:14,0:14:42.13:0,42,625	1/1:2,18:20:53.93:617,54,0	0/0:16,0:16:48.13:0,48,698	0/0:21,0:21:61.74:0,62,861	0/0:44,0:44:99:0,131,1920	0/0:16,0:16:45.14:0,45,669	0/0:18,0:18:51.17:0,51,799	0/0:27,0:27:81.26:0,81,1222	0/0:19,0:19:51.17:0,51,793	1/1:1,8:9:26.98:306,27,0	0/0:21,0:20:57.13:0,57,732	0/0:28,0:28:81.19:0,81,934	0/0:11,0:11:33.07:0,33,378
chr10	2851573	.	AACAACAAAAC	A	1284.53	PASS	AB=0.808;AC=5;AF=0.089;AN=56;BaseQRankSum=9.484;DP=668;FS=2.271;HRun=0;HaplotypeScore=223.4981;InbreedingCoeff=0.7566;MQ=57.50;MQ0=12;MQRankSum=-7.978;QD=27.92;ReadPosRankSum=2.079;VQSLOD=3.2377;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:71.71:0,72,1046	0/0:12,0:12:36.11:0,36,1663	0/0:52,0:28:78.16:0,78,1524	0/0:42,0:15:34.16:0,34,585	0/0:30,0:30:90.30:0,90,3140	0/0:22,0:22:66.04:0,66,2279	0/0:14,0:14:42.14:0,42,1803	0/0:31,0:31:78.17:0,78,1160	0/0:23,0:23:69.24:0,69,2861	0/0:37,0:37:95.56:0,96,4245	0/0:22,0:22:66.21:0,66,2283	0/0:11,0:11:33.11:0,33,1155	0/0:34,0:34:99:0,99,4305	0/0:19,0:19:54.19:0,54,2161	1/1:9,6:15:36.37:638,36,0	0/0:14,0:14:42.14:0,42,1694	0/1:16,5:20:24.31:437,0,24	0/0:16,0:16:47.32:0,47,1719	0/0:23,0:23:66.21:0,66,1961	0/0:45,0:45:99:0,135,5004	0/0:14,0:14:42.14:0,42,1568	0/0:20,0:20:57.11:0,57,2503	0/0:28,0:28:81.28:0,81,2986	0/0:19,0:19:38.28:0,38,2162	1/1:6,4:10:9.91:334,10,0	0/0:22,0:21:55.35:0,55,1080	0/0:26,0:26:71.54:0,72,2105	0/0:11,0:11:33.11:0,33,967
chr10	2851574	.	AC	A	385.44	PASS	AB=0.700;AC=7;AF=0.125;AN=56;BaseQRankSum=10.745;DP=666;FS=0.000;HRun=1;HaplotypeScore=113.7935;InbreedingCoeff=0.8184;MQ=57.92;MQ0=12;MQRankSum=-9.143;QD=5.01;ReadPosRankSum=0.436;VQSLOD=0.1918;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:20,15:35:99:208,0,527	0/0:12,0:12:36.12:0,36,563	0/0:53,1:28:79.94:0,80,960	0/0:44,0:16:21.45:0,21,358	0/0:30,0:30:89.10:0,89,1295	0/0:22,0:22:65.99:0,66,920	0/0:14,0:14:42.14:0,42,660	0/0:31,0:30:89.60:0,90,1056	0/0:23,0:23:69.23:0,69,1070	0/0:37,0:37:99:0,111,1640	0/0:22,0:22:66.21:0,66,971	0/0:11,0:11:33.11:0,33,501	0/0:33,0:33:97.88:0,98,1500	0/0:19,0:19:52.73:0,53,793	1/1:14,0:14:27.78:129,28,0	0/0:14,0:14:41.86:0,42,596	1/1:18,0:17:24.50:126,25,0	0/0:16,0:16:47.97:0,48,673	0/0:22,0:22:64.21:0,64,826	0/0:46,0:46:99:0,137,1951	0/0:14,0:14:39.13:0,39,602	0/0:20,0:20:57.19:0,57,876	0/0:27,0:27:81.27:0,81,1241	0/0:19,0:19:54.18:0,54,823	1/1:10,0:10:10.21:66,10,0	0/0:22,0:21:59.90:0,60,691	0/0:26,0:26:75.14:0,75,769	0/0:11,0:11:32.94:0,33,343
chr10	2851583	.	C	CA	3574.17	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=13.568;DP=668;FS=11.892;HRun=5;HaplotypeScore=103.3179;InbreedingCoeff=0.9962;MQ=63.49;MQ0=11;MQRankSum=-7.814;QD=24.99;ReadPosRankSum=-1.358;VQSLOD=1.8388;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:29:74.72:0,75,770	0/0:11,0:11:33.03:0,33,333	0/0:60,0:32:35.29:0,35,575	0/0:45,0:18:14.76:0,15,181	0/0:31,0:31:81.16:0,81,850	0/0:23,0:23:63.14:0,63,668	0/0:14,0:14:39.09:0,39,412	1/1:21,15:35:74.71:790,75,0	0/0:22,0:22:60.12:0,60,629	0/0:35,0:35:86.17:0,86,916	0/0:21,0:21:60.15:0,60,644	0/0:9,0:9:27.07:0,27,290	0/0:31,0:31:84.16:0,84,872	0/0:18,0:18:48.12:0,48,515	1/1:8,5:13:28.69:341,29,0	0/0:13,0:13:36.06:0,36,371	1/1:13,5:18:36.88:405,37,0	0/0:17,0:17:42.02:0,42,435	0/0:23,0:23:57.01:0,57,582	0/0:44,0:45:99:0,125,1312	0/0:13,0:13:33.03:0,33,334	0/0:21,0:21:57.12:0,57,603	0/0:25,0:25:66.14:0,66,694	0/0:18,0:18:50.90:0,51,501	1/1:7,5:12:27.08:326,27,0	1/1:5,18:23:57.55:654,58,0	1/1:8,16:24:55.65:600,56,0	1/1:2,13:15:35.75:459,36,0
chr10	2851595	.	C	CA	3890.77	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=13.018;DP=650;FS=6.785;HRun=5;HaplotypeScore=103.2224;InbreedingCoeff=0.9993;MQ=73.95;MQ0=8;MQRankSum=-8.058;QD=27.40;ReadPosRankSum=-1.275;VQSLOD=2.5775;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:76.65:0,77,710	0/0:9,0:9:24.06:0,24,257	0/0:55,0:33:75.30:0,75,758	0/0:44,0:25:31.68:0,32,378	0/0:34,0:34:99:0,102,1044	0/0:23,0:23:63.12:0,63,656	0/0:17,0:17:45.09:0,45,468	1/1:32,0:32:78.46:850,78,0	0/0:19,0:19:54.12:0,54,571	0/0:32,0:32:87.18:0,87,911	0/0:25,0:25:69.11:0,69,711	0/0:11,0:11:33.06:0,33,345	0/0:27,0:27:75.16:0,75,787	0/0:16,0:16:45.11:0,45,482	1/1:16,0:16:39.09:443,39,0	0/0:11,0:11:30.07:0,30,315	1/1:12,8:19:33.10:391,33,0	0/0:15,0:15:42.08:0,42,440	0/0:22,0:22:60.13:0,60,625	0/0:44,0:44:99:0,126,1324	0/0:11,0:11:33.06:0,33,345	0/0:21,0:21:51.11:0,51,538	0/0:24,0:24:69.14:0,69,723	0/0:17,0:17:39.10:0,39,417	1/1:13,0:13:36.66:379,37,0	1/1:22,0:22:60.16:698,60,0	1/1:21,0:21:52.06:611,52,0	1/1:18,0:18:45.11:519,45,0
chr10	2853310	.	CT	C	1561.35	PASS	AB=0.826;AC=10;AF=0.179;AN=56;BaseQRankSum=7.694;DP=491;FS=1.469;HRun=11;HaplotypeScore=52.7135;InbreedingCoeff=0.5997;MQ=65.77;MQ0=1;MQRankSum=0.425;QD=11.23;ReadPosRankSum=-0.740;VQSLOD=2.6764;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,1:39:83.22:0,83,1015	0/0:11,0:11:33.08:0,33,346	0/1:13,1:12:3.51:4,0,106	0/0:11,0:8:14.97:0,15,140	0/0:19,1:22:23.15:0,23,411	0/0:14,0:14:42.11:0,42,448	0/1:13,1:14:6.92:7,0,275	1/1:9,23:33:73.56:576,74,0	0/0:8,0:11:23.89:0,24,232	0/0:24,0:24:54.14:0,54,576	0/0:24,0:24:29.44:0,29,501	0/0:15,0:15:30.08:0,30,320	0/0:11,0:11:30.08:0,30,319	0/0:12,0:12:30.06:0,30,312	0/0:15,0:15:32.91:0,33,312	0/0:10,0:10:30.04:0,30,309	0/0:32,0:32:84.13:0,84,871	0/0:11,0:11:30.04:0,30,308	0/0:17,1:19:29.27:0,29,477	0/0:19,0:22:56.76:0,57,554	0/0:14,0:14:33.53:0,34,339	0/0:3,0:3:6.02:0,6,64	0/1:11,2:13:19.22:19,0,223	0/0:15,0:15:39.08:0,39,408	0/0:16,1:17:20.47:0,20,423	0/1:7,21:28:1.16:398,0,1	1/1:3,24:27:62.92:517,63,0	1/1:1,9:10:23.97:197,24,0
chr10	2853661	.	GA	G	4444.54	PASS	AB=0.543;AC=13;AF=0.232;AN=56;BaseQRankSum=14.945;DP=564;FS=1.619;HRun=5;HaplotypeScore=68.0670;InbreedingCoeff=0.8960;MQ=82.20;MQ0=0;MQRankSum=-2.583;QD=28.86;ReadPosRankSum=-0.025;VQSLOD=5.1097;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:75.23:0,75,1007	0/0:12,0:12:33.11:0,33,451	0/0:21,0:21:23.35:0,23,636	0/0:15,0:15:34.92:0,35,422	0/0:23,0:23:66.22:0,66,901	0/0:15,0:15:42.14:0,42,574	0/0:15,0:15:42.14:0,42,573	1/1:2,23:25:66.17:738,66,0	0/0:16,0:16:48.15:0,48,641	0/0:36,0:36:96.31:0,96,1286	0/0:24,0:24:69.20:0,69,895	0/0:16,0:16:45.12:0,45,568	0/0:18,0:18:51.16:0,51,681	0/0:21,0:21:60.14:0,60,755	1/1:2,34:36:96.27:1081,96,0	0/0:19,0:19:54.17:0,54,723	1/1:2,27:29:69.20:782,69,0	0/0:19,0:19:54.18:0,54,737	0/0:16,0:16:45.14:0,45,601	0/0:31,0:31:93.30:0,93,1254	0/0:16,0:16:48.15:0,48,641	0/0:13,0:13:39.13:0,39,533	0/0:22,0:22:63.19:0,63,829	0/0:14,0:14:36.01:0,36,470	1/1:0,15:15:45.13:510,45,0	0/1:4,21:25:50.60:621,0,51	1/1:1,18:19:48.14:543,48,0	1/1:0,5:5:15.04:170,15,0
chr10	2855515	.	CGAATGAATGAAT	C	4642.22	PASS	AB=0.667;AC=7;AF=0.125;AN=56;BaseQRankSum=10.476;DP=652;FS=2.500;HRun=0;HaplotypeScore=228.0620;InbreedingCoeff=0.7633;MQ=67.90;MQ0=0;MQRankSum=-7.129;QD=43.39;ReadPosRankSum=1.691;VQSLOD=4.2656;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:19:24.08:0,24,870	0/0:8,0:8:18.03:0,18,714	0/0:16,0:11:6.02:0,6,210	0/0:19,0:15:9.03:0,9,425	0/0:30,0:31:60.21:0,60,3119	0/0:35,0:35:66.23:0,66,3715	0/0:15,0:15:24.08:0,24,1297	1/1:16,8:24:24.08:452,24,0	0/0:18,0:18:36.12:0,36,2002	0/0:41,0:41:99:0,105,5453	0/0:29,0:29:72.24:0,72,3533	0/0:18,0:18:45.15:0,45,2441	0/0:22,0:22:57.19:0,57,3033	0/0:20,0:20:54.19:0,54,2838	0/0:10,0:17:24.07:0,24,862	0/0:23,0:22:54.16:0,54,2335	0/0:16,0:20:6.08:0,6,101	0/0:18,0:18:39.13:0,39,1971	0/0:20,0:20:27.08:0,27,1162	0/0:35,0:36:75.25:0,75,3630	0/0:18,0:18:39.13:0,39,1912	0/0:28,0:28:63.20:0,63,2844	0/0:31,0:31:57.20:0,57,2966	0/0:14,0:14:36.12:0,36,1804	0/0:14,0:29:42.14:0,42,1559	0/1:13,13:26:99:1003,0,372	1/1:9,32:41:60.06:2038,60,0	1/1:4,12:16:33.11:1149,33,0
chr10	2856041	.	TCTC	T	1487.81	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=7.183;DP=542;FS=6.774;HRun=0;HaplotypeScore=79.4858;InbreedingCoeff=0.9902;MQ=78.16;MQ0=0;MQRankSum=-1.817;QD=33.06;ReadPosRankSum=2.691;VQSLOD=3.9400;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:63.21:0,63,1362	0/0:6,0:6:15.05:0,15,323	0/0:19,0:19:52.06:0,52,1068	0/0:26,0:26:77.38:0,77,1384	0/0:35,0:35:99:0,102,2290	0/0:19,0:19:57.17:0,57,1245	0/0:14,0:14:42.14:0,42,935	0/0:36,0:36:93.30:0,93,1979	0/0:22,0:22:63.22:0,63,1409	0/0:20,0:20:60.21:0,60,1339	0/0:25,0:25:69.23:0,69,1459	0/0:19,0:19:57.20:0,57,1235	0/0:22,0:22:66.23:0,66,1473	0/0:16,0:16:48.16:0,48,1071	1/1:2,10:12:24.08:387,24,0	0/0:19,0:19:57.18:0,57,1221	1/1:1,14:15:33.11:544,33,0	0/0:9,0:9:18.02:0,18,342	0/0:13,0:13:39.08:0,39,720	0/0:28,0:28:81.28:0,81,1789	0/0:28,0:28:84.29:0,84,1889	0/0:12,0:12:33.11:0,33,748	0/0:22,0:22:66.23:0,66,1494	0/0:9,0:9:27.09:0,27,612	1/1:1,17:18:42.14:699,42,0	0/0:17,0:17:51.16:0,51,1101	0/0:19,0:19:54.19:0,54,1205	0/0:19,0:19:57.19:0,57,1253
chr10	2856821	.	CA	C	3588.08	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=9.753;DP=548;FS=8.541;HRun=8;HaplotypeScore=68.6311;InbreedingCoeff=0.9766;MQ=83.15;MQ0=1;MQRankSum=-4.225;QD=23.92;ReadPosRankSum=0.492;VQSLOD=4.1532;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,18:18:45.07:434,45,0	0/0:5,0:5:12.04:0,12,145	0/0:21,0:19:39.22:0,39,545	0/0:22,0:20:36.51:0,37,392	0/0:21,0:21:51.15:0,51,606	0/0:20,0:20:60.17:0,60,713	0/0:20,0:20:54.16:0,54,642	1/1:3,29:32:84.13:811,84,0	0/0:18,0:18:51.14:0,51,604	0/0:26,0:26:66.20:0,66,797	0/0:29,0:29:78.24:0,78,937	0/0:26,0:26:66.15:0,66,771	0/0:20,0:20:57.15:0,57,659	0/0:19,0:19:54.15:0,54,640	1/1:2,17:19:51.08:492,51,0	0/0:19,0:19:48.15:0,48,580	1/1:3,9:12:24.03:231,24,0	0/0:14,0:14:36.11:0,36,434	0/0:26,0:26:72.17:0,72,819	0/0:14,0:14:30.08:0,30,352	0/0:15,0:15:42.11:0,42,493	0/0:20,0:20:54.16:0,54,642	0/0:21,1:22:34.20:0,34,683	0/0:21,0:21:60.17:0,60,714	1/1:4,13:17:36.05:348,36,0	1/1:1,15:16:45.07:434,45,0	1/1:3,29:32:81.02:780,81,0	1/1:2,2:4:6.01:58,6,0
chr10	2860992	.	GA	G	2878.49	PASS	AB=0.583;AC=13;AF=0.232;AN=56;BaseQRankSum=10.607;DP=550;FS=3.355;HRun=10;HaplotypeScore=59.3163;InbreedingCoeff=0.8879;MQ=83.22;MQ0=0;MQRankSum=-1.099;QD=19.32;ReadPosRankSum=1.927;VQSLOD=4.6218;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:25:46.51:0,47,248	0/0:7,0:7:21.04:0,21,223	0/0:22,1:23:15.14:0,15,320	0/0:12,0:13:8.99:0,9,81	0/0:21,0:21:60.14:0,60,648	0/0:23,0:24:59.99:0,60,637	0/0:21,0:22:66.05:0,66,711	1/1:4,15:20:47:393,47,0	0/0:23,0:23:60.16:0,60,663	0/0:13,0:13:36.10:0,36,398	0/0:29,0:29:75.20:0,75,829	0/0:17,1:19:27.92:0,28,519	0/0:16,0:16:48.13:0,48,531	0/0:17,0:18:50.97:0,51,545	1/1:4,25:29:41.80:592,42,0	0/0:24,0:24:57.11:0,57,604	1/1:3,27:30:74.98:651,75,0	0/0:16,0:16:42.11:0,42,463	0/0:21,1:22:22.96:0,23,474	0/0:18,0:18:45.12:0,45,491	0/0:15,0:15:42.11:0,42,464	0/0:16,0:16:39.11:0,39,431	0/0:20,0:20:54.12:0,54,578	0/0:17,0:17:48.13:0,48,531	1/1:1,12:13:29.99:260,30,0	0/1:6,15:21:15.38:340,0,15	1/1:1,24:25:62.98:547,63,0	1/1:0,11:11:32.99:286,33,0
chr10	2861300	.	TAC	T	6549.47	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=15.980;DP=734;FS=1.462;HRun=0;HaplotypeScore=102.5797;InbreedingCoeff=0.9985;MQ=85.00;MQ0=0;MQRankSum=-2.351;QD=36.79;ReadPosRankSum=1.440;VQSLOD=6.5752;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,132,2336	1/1:0,9:9:21.07:301,21,0	0/0:22,0:22:51.22:0,51,1054	0/0:32,0:33:75.33:0,75,1376	0/0:26,0:26:78.25:0,78,1391	0/0:21,0:21:63.22:0,63,1126	0/0:25,0:25:69.20:0,69,1203	1/1:1,30:31:90.29:1268,90,0	0/0:24,0:24:66.21:0,66,1163	0/0:23,0:23:63.22:0,63,1155	0/0:20,0:20:57.20:0,57,1036	0/0:30,0:30:90.29:0,90,1613	0/0:23,0:23:60.21:0,60,1085	0/0:36,0:36:99:0,102,1839	1/1:0,31:31:93.31:1332,93,0	0/0:19,0:19:57.18:0,57,1015	0/0:31,0:31:90.31:0,90,1630	1/1:3,22:25:60.20:859,60,0	0/0:24,0:24:69.23:0,69,1225	0/0:22,0:22:63.22:0,63,1140	0/0:41,0:41:99:0,114,2074	0/0:21,0:21:60.21:0,60,1098	0/0:20,0:20:54.19:0,54,981	0/0:47,0:47:99:0,126,2231	1/1:1,10:11:27.09:387,27,0	1/1:1,21:22:57.17:817,57,0	1/1:0,38:38:90.30:1286,90,0	1/1:4,7:11:21.07:301,21,0
chr10	2862297	.	A	AGTGT	924.52	PASS	AB=0.897;AC=8;AF=0.154;AN=52;BaseQRankSum=-1.824;DP=566;FS=5.012;HRun=0;HaplotypeScore=104.9139;InbreedingCoeff=0.4127;MQ=56.50;MQ0=11;MQRankSum=-0.459;QD=7.97;ReadPosRankSum=-2.855;VQSLOD=1.6198;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:5.86:0,6,67	0/1:3,0:3:14.97:15,0,22	./.	./.	0/0:24,0:24:15.04:0,15,219	1/1:20,14:43:30.03:683,30,0	0/1:20,4:27:10.66:106,0,11	0/0:25,0:21:0:0,0,0	0/0:23,0:23:16.13:0,16,265	0/0:31,0:31:16.40:0,16,181	0/0:23,0:23:12.51:0,13,171	0/0:20,0:20:6.02:0,6,93	0/0:18,0:20:4.93:0,5,197	0/0:20,0:20:15.05:0,15,227	0/0:17,0:19:27.07:0,27,369	1/1:17,5:24:12.51:246,13,0	1/1:19,0:18:0.47:1,0,0	0/0:15,0:15:15.01:0,15,187	0/0:14,0:14:3.01:0,3,46	0/0:17,0:18:20.79:0,21,260	0/0:23,0:22:9.02:0,9,129	0/0:20,0:20:6.01:0,6,87	0/0:18,0:18:21.06:0,21,314	0/0:20,0:18:15.04:0,15,216	0/0:17,0:17:17.95:0,18,274	0/0:10,0:13:3:0,3,28	0/0:16,0:30:23.95:0,24,212	0/0:9,0:10:2.73:0,3,27
chr10	2863385	.	GT	G	500.62	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.119;DP=953;FS=6.540;HRun=4;HaplotypeScore=101.8516;InbreedingCoeff=0.9997;MQ=76.51;MQ0=0;MQRankSum=-1.843;QD=27.81;ReadPosRankSum=-0.827;VQSLOD=2.4108;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,102,1385	0/0:14,0:14:39.13:0,39,546	0/0:41,0:39:91.91:0,92,1206	0/0:33,0:31:83.25:0,83,1067	0/0:33,0:33:93.29:0,93,1269	0/0:33,0:33:93.31:0,93,1299	0/0:25,0:25:75.25:0,75,1050	0/0:49,0:49:99:0,133,1787	0/0:38,0:38:99:0,111,1520	0/0:49,0:49:99:0,131,1797	0/0:21,0:21:63.21:0,63,882	0/0:54,0:54:99:0,150,2029	0/0:48,0:48:99:0,138,1899	0/0:53,0:53:99:0,150,2052	0/0:56,0:56:99:0,160,2192	0/0:51,0:51:99:0,141,1888	1/1:1,17:18:51.11:596,51,0	0/0:11,0:11:33.11:0,33,462	0/0:19,0:19:54.18:0,54,756	0/0:30,0:30:90.28:0,90,1230	0/0:55,0:55:99:0,153,2103	0/0:25,0:25:63.20:0,63,864	0/0:26,0:26:78.25:0,78,1075	0/0:34,0:34:96.27:0,96,1273	0/0:26,0:25:75.25:0,75,1047	0/0:34,0:33:90.26:0,90,1196	0/0:26,0:26:78.23:0,78,1068	0/0:16,0:16:48.16:0,48,672
chr10	2863815	.	G	GT	3020.90	PASS	AB=0.538;AC=13;AF=0.232;AN=56;BaseQRankSum=15.435;DP=669;FS=0.000;HRun=8;HaplotypeScore=82.5624;InbreedingCoeff=0.9116;MQ=83.14;MQ0=0;MQRankSum=0.207;QD=18.65;ReadPosRankSum=2.777;VQSLOD=3.5245;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,105,955	0/0:6,0:6:15:0,15,137	0/0:31,0:31:45.41:0,45,443	0/0:20,0:18:27.55:0,28,263	0/0:28,0:28:75.04:0,75,684	0/0:31,0:31:84.04:0,84,769	0/0:19,0:19:51.03:0,51,466	0/0:25,0:25:60.02:0,60,547	0/0:26,0:26:69.03:0,69,631	0/0:22,0:22:60.02:0,60,549	0/0:19,0:19:51.01:0,51,462	0/0:26,0:26:75.03:0,75,682	0/0:25,0:25:62.98:0,63,566	0/0:22,0:22:56.77:0,57,521	1/1:7,30:37:87.26:1002,87,0	0/0:17,0:17:39.01:0,39,357	1/1:1,4:21:51.47:300,51,0	1/1:1,13:14:39.11:447,39,0	0/0:21,0:21:47.94:0,48,425	0/0:33,0:33:96.04:0,96,872	0/0:24,0:24:60.02:0,60,549	0/0:21,0:21:54:0,54,488	0/0:30,0:30:81.01:0,81,732	0/0:25,0:25:71.99:0,72,647	1/1:0,24:24:60.18:692,60,0	1/1:4,0:33:58.14:403,58,0	1/1:4,1:26:62.66:337,63,0	0/1:1,0:7:7.84:31,0,8
chr10	2865765	.	C	CCAAA	3136.71	PASS	AB=0.791;AC=9;AF=0.161;AN=56;BaseQRankSum=11.365;DP=703;FS=17.833;HRun=0;HaplotypeScore=155.3070;InbreedingCoeff=0.0685;MQ=73.68;MQ0=2;MQRankSum=-6.498;QD=15.92;ReadPosRankSum=-7.396;VQSLOD=0.1783;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:16:37.52:0,38,396	0/0:14,0:15:42.58:0,43,784	0/1:27,0:21:25.68:26,0,358	0/0:19,0:15:28.30:0,28,212	0/0:29,0:29:72.55:0,73,1331	0/0:28,0:27:84.04:0,84,1430	0/0:24,0:26:72.08:0,72,1203	0/0:37,0:39:99:0,108,1705	0/0:28,0:29:53.72:0,54,906	0/0:30,0:33:90.12:0,90,1571	0/0:24,0:24:69.07:0,69,1042	0/0:25,0:26:27.49:0,27,730	0/0:22,0:29:47.04:0,47,805	0/0:24,0:24:38.52:0,39,672	0/1:17,0:20:26.85:384,0,27	0/0:30,0:32:2:0,2,1148	0/1:8,0:19:35.64:164,0,36	0/1:13,0:17:27.13:274,0,27	0/0:20,0:22:60.64:0,61,1063	0/0:28,0:29:78.11:0,78,1473	0/0:20,0:22:34.72:0,35,1011	0/0:28,0:30:87.18:0,87,1540	0/0:18,0:18:51.11:0,51,929	0/0:15,0:15:39.08:0,39,727	0/1:7,1:27:13.44:286,0,13	1/1:26,0:30:37.29:768,37,0	0/1:26,0:33:23.17:874,0,23	0/1:19,0:22:18.02:507,0,18
chr10	2865846	.	GA	G	1271.83	PASS	AB=0.873;AC=8;AF=0.143;AN=56;BaseQRankSum=7.961;DP=601;FS=13.867;HRun=10;HaplotypeScore=65.6499;InbreedingCoeff=0.6900;MQ=72.16;MQ0=0;MQRankSum=-2.666;QD=12.47;ReadPosRankSum=3.128;VQSLOD=1.7673;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:36.10:0,36,398	0/0:11,0:11:24.06:0,24,266	0/0:11,0:11:5.10:0,5,148	0/0:9,0:9:14.96:0,15,134	0/0:33,0:33:80.14:0,80,886	0/0:26,0:26:75.18:0,75,814	0/0:16,1:19:24.75:0,25,467	0/0:26,0:26:66.18:0,66,730	0/0:24,0:24:66.15:0,66,714	0/0:18,0:18:42.11:0,42,465	0/0:25,0:25:60.15:0,60,657	0/0:24,0:27:59.98:0,60,630	0/0:31,0:31:78.18:0,78,840	0/0:18,0:18:48.13:0,48,530	0/0:18,0:19:53.90:0,54,551	0/0:28,0:28:66.17:0,66,722	0/0:18,0:18:52.66:0,53,555	0/0:13,1:14:16.05:0,16,395	0/0:21,0:23:65.84:0,66,692	0/0:29,0:33:89.70:0,90,925	0/1:13,2:15:19.04:19,0,256	0/1:16,3:19:5.44:5,0,388	0/0:25,0:26:74.99:0,75,790	0/0:16,0:16:45.07:0,45,476	0/0:29,0:28:69.10:0,69,736	1/1:5,14:19:11.79:327,12,0	1/1:5,28:33:83.95:729,84,0	1/1:3,13:16:38.98:339,39,0
chr10	2865910	.	GA	G	1758.08	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=11.373;DP=616;FS=0.000;HRun=1;HaplotypeScore=68.7228;InbreedingCoeff=0.9978;MQ=85.51;MQ0=2;MQRankSum=-2.798;QD=34.47;ReadPosRankSum=3.914;VQSLOD=3.4801;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:54.10:0,54,829	0/0:7,0:7:21.06:0,21,313	0/0:25,0:24:68.02:0,68,997	0/0:19,0:19:48.12:0,48,720	0/0:35,0:35:99:0,105,1667	0/0:35,0:35:99:0,105,1679	0/0:21,0:21:63.21:0,63,1003	0/0:27,0:27:81.27:0,81,1269	0/0:22,0:22:66.22:0,66,1048	0/0:18,0:18:54.18:0,54,861	0/0:21,0:21:63.21:0,63,1007	0/0:19,0:19:51.17:0,51,815	0/0:25,0:25:72.25:0,72,1148	0/0:17,0:17:48.16:0,48,766	1/1:0,18:18:54.18:700,54,0	0/0:25,0:25:75.24:0,75,1174	0/0:15,0:15:45.12:0,45,692	1/1:0,8:8:24.08:307,24,0	0/0:27,0:27:81.26:0,81,1252	0/0:34,0:34:99:0,102,1624	0/0:13,0:13:39.13:0,39,624	0/0:28,0:28:84.29:0,84,1332	0/0:35,0:35:99:0,105,1678	0/0:16,0:16:45.15:0,45,720	1/1:0,25:24:69.22:894,69,0	0/0:22,0:21:63.21:0,63,1007	0/0:28,0:28:84.27:0,84,1317	0/0:13,0:13:39.13:0,39,623
chr10	2866267	.	CT	C	2971.57	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=13.282;DP=698;FS=2.055;HRun=1;HaplotypeScore=74.2373;InbreedingCoeff=0.9796;MQ=86.77;MQ0=0;MQRankSum=-2.587;QD=37.14;ReadPosRankSum=2.785;VQSLOD=4.2936;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:84.26:0,84,1295	0/0:15,0:15:45.14:0,45,696	0/0:32,0:32:96.27:0,96,1467	0/0:17,0:17:45.15:0,45,718	0/0:17,0:17:51.17:0,51,812	0/0:22,0:22:66.19:0,66,1006	0/0:22,0:22:66.20:0,66,1009	0/0:37,0:37:99:0,108,1706	0/0:26,0:26:78.25:0,78,1222	0/0:30,0:30:90.29:0,90,1381	0/0:21,0:21:63.19:0,63,959	0/0:27,0:27:81.26:0,81,1270	0/0:25,0:25:75.24:0,75,1174	0/0:31,0:31:93.29:0,93,1440	1/1:0,34:34:93.31:1300,93,0	0/0:20,0:20:60.19:0,60,936	0/0:31,0:31:90.25:0,90,1373	1/1:0,20:20:57.19:790,57,0	0/0:20,0:20:60.20:0,60,940	0/0:28,0:28:84.27:0,84,1317	0/0:32,0:32:96.28:0,96,1460	0/0:18,0:18:51.07:0,51,761	0/0:28,0:28:81.28:0,81,1294	0/0:27,0:27:81.26:0,81,1268	1/1:0,26:26:75.21:1025,75,0	0/0:16,0:16:48.15:0,48,725	0/0:45,0:45:99:0,135,2061	0/0:3,0:3:9.03:0,9,144
chr10	2866571	.	GGT	G	304.71	PASS	AB=0.986;AC=19;AF=0.365;AN=52;BaseQRankSum=2.651;DP=606;FS=4.130;HRun=0;HaplotypeScore=86.4108;InbreedingCoeff=-0.2762;MQ=65.48;MQ0=44;MQRankSum=0.286;QD=0.90;ReadPosRankSum=0.693;VQSLOD=1.0010;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:22:14.69:0,15,129	0/1:10,0:10:5.67:6,0,80	./.	./.	0/1:18,1:18:46.92:47,0,96	0/0:18,0:17:6.89:0,7,63	0/0:25,1:25:10.25:0,10,87	0/0:31,0:29:8.78:0,9,53	0/1:9,0:9:16.30:16,0,76	0/1:25,0:22:59.96:60,0,147	0/0:5,0:5:9.02:0,9,108	0/1:28,0:26:44.27:44,0,105	0/1:20,0:18:41.65:42,0,79	0/1:14,2:14:20.63:21,0,69	0/0:11,0:10:1.16:0,1,58	0/0:15,1:15:14.94:0,15,161	0/0:25,0:25:7.25:0,7,71	0/1:10,0:8:6.34:6,0,6	0/1:15,1:17:20.75:29,0,21	0/1:19,0:19:20.94:21,0,130	0/1:54,0:45:8.56:9,0,114	0/1:21,0:21:49.83:50,0,85	0/0:11,0:11:7.83:0,8,105	0/1:21,0:23:24.09:24,0,299	0/1:18,0:17:13.48:13,0,75	1/1:20,0:17:5.45:19,5,0	1/1:20,0:20:11.26:43,11,0	0/1:7,0:7:6.24:6,0,8
chr10	2866612	.	GTGTA	G	1407.34	PASS	AB=0.974;AC=25;AF=0.481;AN=52;BaseQRankSum=7.066;DP=601;FS=50.185;HRun=0;HaplotypeScore=115.2841;InbreedingCoeff=-0.1798;MQ=45.15;MQ0=77;MQRankSum=-1.205;QD=2.93;ReadPosRankSum=-0.543;VQSLOD=-0.2873;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:23:14.06:14,0,101	0/1:12,0:12:21.45:21,0,142	./.	./.	0/1:22,0:19:20.97:21,0,137	0/1:17,0:15:10.09:10,0,78	0/1:21,0:16:9.58:10,0,83	0/1:30,0:24:69.84:70,0,115	0/0:18,0:16:14.41:0,14,322	0/1:33,0:28:29.85:30,0,375	0/0:13,0:12:22.32:0,22,201	0/0:29,0:26:18.27:0,18,241	0/1:20,0:18:20.33:20,0,176	0/0:14,0:10:21.15:0,21,176	1/1:21,0:17:4.91:188,5,0	0/0:23,0:21:21.78:0,22,334	0/1:14,24:35:32.09:32,0,100	1/1:15,0:12:8.65:123,9,0	0/1:16,0:14:60.99:61,0,148	0/1:21,0:20:24.32:24,0,332	0/1:65,0:47:99:137,0,223	0/0:24,0:21:21.08:0,21,296	0/1:20,0:19:21.15:21,0,209	0/1:32,0:31:15.42:15,0,501	0/1:19,0:16:30.18:86,0,30	1/1:20,0:14:33.29:265,33,0	1/1:16,1:17:41.62:329,42,0	1/1:10,0:9:8.56:99,9,0
chr10	2866614	.	GTA	G	1829.87	PASS	AB=0.989;AC=28;AF=0.538;AN=52;BaseQRankSum=7.090;DP=604;FS=46.971;HRun=0;HaplotypeScore=99.6190;InbreedingCoeff=-0.2837;MQ=45.29;MQ0=77;MQRankSum=-0.408;QD=3.31;ReadPosRankSum=0.740;VQSLOD=0.1250;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:28,1:22:14.38:14,0,84	0/1:12,0:12:35.76:36,0,115	./.	./.	0/1:22,0:19:29.91:30,0,134	0/1:17,0:15:10.05:10,0,75	0/1:22,0:17:5.44:5,0,112	0/1:29,0:23:70.86:71,0,139	0/1:18,0:16:5.17:5,0,224	0/1:33,0:28:99:114,0,324	0/0:13,0:12:22.01:0,22,185	0/1:28,0:25:0.06:0,0,208	0/1:20,0:18:40.55:41,0,107	0/0:14,0:10:12.15:0,12,104	1/1:17,4:17:14.66:232,15,0	0/1:23,0:21:1.43:1,0,206	0/1:38,0:35:53.24:53,0,71	1/1:15,0:12:15.27:169,15,0	0/1:19,0:17:68.70:69,0,169	0/1:21,0:20:56:56,0,268	0/1:65,0:47:99:190,0,168	0/0:25,0:22:15.96:0,16,253	0/1:20,0:19:24.48:24,0,189	0/1:33,0:31:42.48:42,0,420	0/1:16,4:17:15.64:122,0,16	1/1:20,0:14:33.27:253,33,0	1/1:16,1:17:41.68:337,42,0	1/1:10,0:9:12.06:115,12,0
chr10	2866618	.	GTGTGTGTGTA	G	2104.18	PASS	AB=1.000;AC=20;AF=0.385;AN=52;BaseQRankSum=6.615;DP=602;FS=45.450;HRun=0;HaplotypeScore=161.7438;InbreedingCoeff=0.0203;MQ=45.82;MQ0=75;MQRankSum=-0.624;QD=5.37;ReadPosRankSum=-1.284;VQSLOD=1.1512;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:21:77.91:78,0,119	0/1:12,0:12:2.28:2,0,336	./.	./.	0/0:21,0:18:16.82:0,17,424	0/0:17,0:15:10.80:0,11,257	0/0:22,0:17:6.46:0,6,163	0/1:27,0:21:57.34:57,0,109	0/0:18,0:16:2.92:0,3,502	0/1:31,0:26:38.23:38,0,665	0/0:14,0:13:25.88:0,26,374	0/1:28,0:25:3.51:4,0,531	0/0:21,0:19:13.89:0,14,613	0/0:16,0:12:24.04:0,24,452	1/1:20,0:16:7.98:518,8,0	0/0:24,0:22:29.41:0,29,592	0/1:35,0:33:23.30:23,0,188	0/1:15,0:12:65.17:204,0,65	0/1:20,0:19:13.22:13,0,337	0/1:21,0:20:2.85:3,0,647	0/1:65,0:47:99:113,0,736	0/0:25,0:22:14.50:0,15,715	0/1:21,0:20:7.97:8,0,609	0/0:32,0:30:2.89:0,3,831	0/1:19,0:16:64.48:122,0,64	1/1:9,14:17:38.81:427,39,0	1/1:18,0:18:41.70:472,42,0	1/1:10,0:9:18.01:184,18,0
chr10	2866622	.	GTGTGTA	G	1193.60	PASS	AB=0.978;AC=19;AF=0.365;AN=52;BaseQRankSum=7.570;DP=602;FS=62.037;HRun=0;HaplotypeScore=134.8051;InbreedingCoeff=-0.0814;MQ=46.17;MQ0=75;MQRankSum=-0.419;QD=3.00;ReadPosRankSum=-1.161;VQSLOD=-0.0283;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:20:21.22:0,21,188	0/1:13,0:13:11.27:11,0,280	./.	./.	0/0:21,0:18:19.19:0,19,439	0/0:15,0:13:10.80:0,11,230	0/0:24,0:19:11.88:0,12,265	0/1:14,9:18:99:219,0,171	0/0:21,0:19:6.82:0,7,555	0/1:32,0:27:35.37:35,0,678	0/0:14,0:13:25.88:0,26,459	0/1:27,0:24:3.98:4,0,566	0/1:20,0:18:15.45:15,0,419	0/0:15,0:12:23.87:0,24,439	1/1:21,0:17:5.39:184,5,0	0/0:22,0:20:31.03:0,31,564	0/1:36,0:33:60.70:61,0,95	0/1:18,0:15:29.26:136,0,29	0/1:17,0:16:32.31:32,0,292	0/0:21,0:20:0.16:0,0,681	0/1:65,0:47:99:113,0,628	0/0:23,0:21:17.43:0,17,717	0/1:22,0:21:16.04:16,0,585	0/1:33,0:32:12.23:12,0,771	0/1:20,0:17:31.52:32,0,97	1/1:22,0:16:22.36:214,22,0	1/1:18,0:18:26.34:205,26,0	0/1:10,0:9:1.49:65,0,1
chr10	2866626	.	GTA	G	1508.64	PASS	AB=0.995;AC=24;AF=0.444;AN=54;BaseQRankSum=9.553;DP=599;FS=51.515;HRun=0;HaplotypeScore=96.1464;InbreedingCoeff=-0.1742;MQ=46.37;MQ0=73;MQRankSum=0.510;QD=3.45;ReadPosRankSum=-1.433;VQSLOD=-0.4512;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:20:2.85:0,3,126	0/1:14,0:14:15.97:16,0,195	1/1:3,2:2:5.84:35,6,0	./.	0/0:20,0:17:3.32:0,3,270	0/0:16,0:14:0.81:0,1,168	0/0:24,0:20:5.96:0,6,200	0/1:22,0:17:84.37:84,0,182	0/1:21,0:19:16.30:16,0,336	0/1:30,0:25:89.25:89,0,469	0/0:13,0:12:25.26:0,25,350	0/1:27,1:25:9.81:10,0,411	0/1:19,0:17:26.11:26,0,240	0/0:15,0:13:17.08:0,17,351	1/1:21,0:17:10.35:191,10,0	0/1:22,0:20:29.50:29,0,313	0/1:33,1:31:36.75:37,0,52	1/1:19,0:16:26.99:222,27,0	0/1:18,0:17:46.77:47,0,193	0/0:21,0:20:0.13:0,0,480	0/1:62,0:45:99:234,0,340	0/0:23,0:22:8.49:0,8,468	0/1:22,0:21:62.62:63,0,478	0/1:33,0:31:34:34,0,478	0/1:19,0:16:54.65:55,0,80	1/1:22,0:16:21.10:210,21,0	1/1:17,0:17:28.67:213,29,0	0/1:9,0:8:3.90:61,0,4
chr10	2866640	.	G	GTA	1122.05	PASS	AB=0.975;AC=9;AF=0.161;AN=56;BaseQRankSum=5.909;DP=574;FS=7.203;HRun=0;HaplotypeScore=92.5335;InbreedingCoeff=0.2877;MQ=49.19;MQ0=59;MQRankSum=2.523;QD=9.35;ReadPosRankSum=4.207;VQSLOD=2.1769;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:21:77.94:78,0,132	0/0:13,0:13:23.91:0,24,319	0/0:14,0:9:19.81:0,20,178	0/0:15,0:7:14.94:0,15,135	0/0:21,0:18:33.04:0,33,411	0/0:19,0:18:33.12:0,33,357	0/0:21,0:17:29.80:0,30,345	0/0:24,0:20:50.72:0,51,360	0/0:17,0:15:30.49:0,30,385	0/0:24,0:22:51.87:0,52,592	0/0:12,0:12:29.94:0,30,384	0/0:25,0:23:39:0,39,501	0/0:17,0:15:33.44:0,33,365	0/0:15,0:12:33.03:0,33,428	0/1:21,0:17:55.97:115,0,56	0/0:20,0:19:41.89:0,42,459	0/0:32,0:29:19.39:0,19,164	0/1:21,0:18:77.38:81,0,77	0/0:16,0:16:47.71:0,48,397	0/0:20,0:19:45.04:0,45,573	0/0:55,0:44:74.89:0,75,780	0/0:22,0:21:42.10:0,42,593	0/0:20,0:19:44.98:0,45,560	0/0:31,0:29:51.05:0,51,617	0/1:13,0:11:46.85:47,0,56	1/1:19,1:15:5.21:395,5,0	1/1:10,2:12:23.04:418,23,0	0/1:6,1:7:27.27:134,0,27
chr10	2866808	.	GTGTAGTACCCCAC	G	2366.22	PASS	AC=4;AF=0.074;AN=54;BaseQRankSum=7.648;DP=610;FS=4.126;HRun=0;HaplotypeScore=217.4557;InbreedingCoeff=0.9941;MQ=84.93;MQ0=0;MQRankSum=-7.746;QD=62.27;ReadPosRankSum=1.725;VQSLOD=2.9823;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,102,5592	0/0:8,0:8:18.06:0,18,923	0/0:12,0:13:24.08:0,24,1040	0/0:27,0:27:48.16:0,48,2262	0/0:17,0:17:48.14:0,48,2812	0/0:18,0:18:39.13:0,39,2415	0/0:19,0:19:54.19:0,54,2939	0/0:27,0:26:54.19:0,54,2942	0/0:22,0:22:54.17:0,54,3122	0/0:23,0:23:51.16:0,51,3014	0/0:20,0:20:39.13:0,39,2426	0/0:26,0:26:54.17:0,54,2938	0/0:24,0:24:57.20:0,57,3168	0/0:22,0:22:54.17:0,54,2950	0/0:27,0:27:69.22:0,69,3932	0/0:31,0:31:81.26:0,81,4657	0/0:26,0:26:63.22:0,63,3789	0/0:19,0:19:51.15:0,51,2874	0/0:19,0:19:36.12:0,36,2218	0/0:20,0:20:54.19:0,54,3117	0/0:40,0:40:99:0,108,6454	0/0:26,0:26:60.21:0,60,3720	0/0:17,0:17:45.13:0,45,2516	0/0:21,0:21:51.17:0,51,2763	0/0:17,0:17:45.14:0,45,2532	1/1:7,9:16:27.09:1017,27,0	1/1:8,14:22:39.13:1470,39,0	./.
chr10	2868368	.	G	GTA	5373.39	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-13.242;DP=738;FS=0.000;HRun=0;HaplotypeScore=86.1620;InbreedingCoeff=0.9975;MQ=91.99;MQ0=4;MQRankSum=0.388;QD=46.73;ReadPosRankSum=-0.976;VQSLOD=5.7401;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:84.24:0,84,1191	0/0:9,0:9:27.09:0,27,397	0/0:24,0:24:69.21:0,69,945	0/0:38,0:38:95.65:0,96,1239	0/0:24,0:24:72.23:0,72,1039	0/0:37,0:37:99:0,105,1502	0/0:18,0:18:48.15:0,48,687	1/1:5,28:35:96.25:1621,96,0	0/0:25,0:25:75.24:0,75,1083	0/0:42,0:42:99:0,117,1656	0/0:24,0:24:72.24:0,72,1056	0/0:32,0:32:96.31:0,96,1389	0/0:36,0:36:99:0,105,1498	0/0:25,0:25:69.23:0,69,1014	0/0:32,0:32:93.31:0,93,1368	0/0:15,0:15:45.14:0,45,643	0/0:27,0:27:75.24:0,75,1083	0/0:21,0:21:55.74:0,56,798	0/0:22,0:22:59.92:0,60,815	0/0:28,0:28:81.26:0,81,1170	0/0:27,0:27:72.23:0,72,1033	0/0:20,0:20:60.03:0,60,851	0/0:22,0:22:66.21:0,66,949	0/0:20,0:20:57.17:0,57,817	0/0:26,0:26:78.26:0,78,1147	1/1:1,30:29:43.12:1456,43,0	1/1:1,39:40:99:1960,105,0	1/1:1,7:7:18.06:337,18,0
chr10	2868450	.	AC	A	722.98	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.106;DP=678;FS=0.806;HRun=2;HaplotypeScore=62.8987;InbreedingCoeff=0.9826;MQ=88.92;MQ0=4;MQRankSum=-4.445;QD=34.43;ReadPosRankSum=0.895;VQSLOD=3.8697;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,21:21:63.20:818,63,0	0/0:11,0:11:33.11:0,33,493	0/0:29,0:29:78.24:0,78,1097	0/0:21,0:21:25.09:0,25,700	0/0:21,0:21:60.20:0,60,899	0/0:26,0:26:78.26:0,78,1169	0/0:18,0:18:54.18:0,54,809	0/0:30,0:30:87.28:0,87,1270	0/0:26,0:26:75.24:0,75,1102	0/0:24,0:24:69.23:0,69,1027	0/0:19,0:19:57.19:0,57,854	0/0:31,0:31:93.31:0,93,1390	0/0:37,0:37:99:0,108,1575	0/0:36,0:36:99:0,108,1555	0/0:32,0:32:96.31:0,96,1415	0/0:22,0:22:66.21:0,66,969	0/0:23,0:23:69.23:0,69,1027	0/0:15,0:15:42.10:0,42,603	0/0:25,0:25:72.23:0,72,1053	0/0:37,0:37:99:0,111,1660	0/0:21,0:20:63.20:0,63,920	0/0:27,0:27:78.26:0,78,1168	0/0:17,0:17:45.15:0,45,665	0/0:15,0:15:45.15:0,45,670	0/0:32,0:32:96.31:0,96,1403	0/0:26,0:24:66.21:0,66,967	0/0:29,0:28:78.25:0,78,1138	0/0:7,0:6:15.05:0,15,225
chr10	2871524	.	G	GGTGTGT	783.77	PASS	AB=1.000;AC=10;AF=0.179;AN=56;BaseQRankSum=6.767;DP=553;FS=1.705;HRun=0;HaplotypeScore=143.9571;InbreedingCoeff=0.7280;MQ=66.49;MQ0=8;MQRankSum=-2.441;QD=7.26;ReadPosRankSum=-0.218;VQSLOD=2.7973;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:15,0:15:19.97:104,0,20	0/0:6,0:6:12.04:0,12,268	0/0:19,0:14:36.08:0,36,707	0/0:35,0:22:66.07:0,66,1172	0/0:13,0:13:36.09:0,36,629	0/0:19,0:18:47.95:0,48,889	0/0:21,0:21:60.05:0,60,1039	0/0:24,0:24:68.82:0,69,1073	0/0:13,0:13:27.98:0,28,534	0/0:25,0:24:60.64:0,61,1083	0/0:20,0:20:47.42:0,47,816	0/0:30,0:30:76.13:0,76,1535	0/0:15,0:15:35.88:0,36,685	0/0:18,0:18:48.14:0,48,910	1/1:22,0:22:26.24:324,26,0	0/0:29,0:29:75.19:0,75,1404	1/1:10,0:10:6.88:145,7,0	1/1:8,9:19:5.72:114,6,0	0/0:19,0:19:51.05:0,51,904	0/0:15,0:15:35.19:0,35,643	0/0:37,0:36:72.12:0,72,1037	0/0:19,0:19:48.15:0,48,933	0/0:9,0:8:18.02:0,18,316	0/0:38,0:38:96.08:0,96,1909	1/1:24,0:24:16.78:248,17,0	0/1:18,0:17:2.43:2,0,491	0/0:9,0:9:24.90:0,25,299	0/0:12,0:11:25.29:0,25,385
chr10	2871526	.	G	GGT	704.08	PASS	AB=0.910;AC=15;AF=0.278;AN=54;BaseQRankSum=5.875;DP=620;FS=7.893;HRun=0;HaplotypeScore=131.3203;InbreedingCoeff=0.5634;MQ=61.48;MQ0=9;MQRankSum=-4.731;QD=3.14;ReadPosRankSum=-0.432;VQSLOD=1.4914;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:24:5.46:31,5,0	0/0:6,0:6:12:0,12,115	0/0:17,0:12:3.01:0,3,33	./.	0/0:16,0:16:14.99:0,15,153	0/0:18,0:18:11.30:0,11,242	0/0:21,0:23:23.71:0,24,219	0/1:26,0:26:8.80:51,0,9	0/0:12,0:14:0.70:0,1,112	0/0:22,0:24:31.14:0,31,255	0/0:27,0:27:27.24:0,27,276	0/0:31,0:32:47.29:0,47,462	0/0:14,0:16:8.53:0,9,187	0/0:20,0:20:30.54:0,31,325	1/1:27,0:28:12.24:143,12,0	0/0:27,0:28:44.92:0,45,452	1/1:9,0:9:2.88:25,3,0	1/1:17,0:17:2.98:22,3,0	0/0:18,0:20:13.70:0,14,109	0/0:16,0:16:21.05:0,21,226	0/1:27,14:42:35.75:203,0,36	0/0:20,0:20:30.07:0,30,325	0/0:9,0:8:12.03:0,12,133	0/0:37,2:39:26.57:0,27,667	1/1:26,0:30:8.50:56,8,0	0/1:30,0:28:0.05:202,0,0	1/1:14,0:14:14.95:133,15,0	0/0:13,0:12:0.27:0,0,1
chr10	2871559	.	G	GTGTGTGTGTGTGTGTA	2687.91	PASS	AB=1.000;AC=12;AF=0.214;AN=56;BaseQRankSum=5.778;DP=609;FS=18.739;HRun=0;HaplotypeScore=250.0195;InbreedingCoeff=0.1406;MQ=54.44;MQ0=7;MQRankSum=-5.566;QD=12.44;ReadPosRankSum=-4.125;VQSLOD=0.0088;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:25:99:217,0,105	0/0:7,0:7:18.01:0,18,403	0/1:35,0:13:2.56:3,0,233	0/0:41,0:16:36.34:0,36,382	0/0:15,0:15:30.28:0,30,728	0/0:22,0:21:28.87:0,29,1086	0/0:25,0:25:58.42:0,58,839	0/0:29,0:29:24.42:0,24,454	0/0:14,0:14:18.91:0,19,670	0/1:20,0:19:36.59:37,0,1156	0/0:23,0:23:59.47:0,59,1172	0/0:35,0:35:82.33:0,82,2171	0/0:15,0:15:24.07:0,24,865	0/0:16,0:16:42.08:0,42,1311	0/1:29,0:28:99:578,0,118	0/0:22,0:22:51.07:0,51,1655	1/1:0,7:13:12.04:712,12,0	0/1:14,0:14:43.19:43,0,69	0/0:17,0:16:35.40:0,35,586	0/0:16,0:16:42:0,42,821	0/0:31,0:30:29.57:0,30,511	0/0:18,0:18:51.05:0,51,1293	0/0:8,0:7:18.03:0,18,476	0/0:39,0:38:99:0,105,2972	0/1:31,0:29:63.77:542,0,64	0/1:31,0:29:99:417,0,295	0/1:12,0:12:99:109,0,111	1/1:5,0:5:9.03:186,9,0
chr10	2871561	.	GTA	G	888.49	PASS	AB=0.981;AC=13;AF=0.232;AN=56;BaseQRankSum=5.282;DP=605;FS=14.262;HRun=0;HaplotypeScore=102.6380;InbreedingCoeff=0.2927;MQ=54.85;MQ0=8;MQRankSum=-2.589;QD=4.33;ReadPosRankSum=-3.408;VQSLOD=0.0341;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:23:22.88:0,23,171	0/0:7,0:7:18.02:0,18,247	0/0:36,0:13:26.10:0,26,307	0/0:44,0:18:40.58:0,41,439	0/0:16,0:16:7.32:0,7,422	0/1:22,1:22:0.91:1,0,512	0/0:25,0:25:44.84:0,45,715	1/1:29,0:29:46.66:468,47,0	0/0:14,0:14:6.11:0,6,291	0/1:19,0:18:26.37:26,0,526	0/0:22,1:23:56.80:0,57,855	0/0:32,2:34:40.25:0,40,1029	0/1:15,1:16:20.48:20,0,429	0/0:17,0:17:41.91:0,42,652	0/1:28,0:27:49.03:49,0,240	0/0:21,1:22:18.24:0,18,699	0/0:10,0:10:9.01:0,9,89	0/1:15,0:15:3.92:4,0,96	0/0:17,0:16:29.81:0,30,404	0/0:15,0:15:42.05:0,42,596	0/1:27,1:27:7.69:8,0,305	0/0:17,1:18:51.08:0,51,770	0/0:8,0:7:18.03:0,18,280	0/0:40,0:39:98.02:0,98,1513	0/0:30,0:28:12.39:0,12,99	0/1:30,0:28:24.05:273,0,24	1/1:12,0:12:22.19:167,22,0	1/1:5,0:5:6.49:31,6,0
chr10	2874633	.	T	TATACATATAC	1053.41	PASS	AB=0.897;AC=10;AF=0.179;AN=56;BaseQRankSum=7.101;DP=546;FS=4.591;HRun=0;HaplotypeScore=171.6891;InbreedingCoeff=0.3629;MQ=62.42;MQ0=0;MQRankSum=-3.248;QD=10.13;ReadPosRankSum=-2.219;VQSLOD=2.0299;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:7,0:9:3.46:25,3,0	0/0:13,0:13:39.08:0,39,862	1/1:5,0:4:0.94:1,1,0	0/1:15,0:7:8.92:9,0,51	0/0:46,0:46:99:0,138,3692	0/0:25,0:25:75.24:0,75,2262	0/0:9,0:9:27.08:0,27,774	0/0:54,0:54:99:0,153,3683	0/0:18,0:18:48.12:0,48,1238	0/0:24,0:24:66.21:0,66,1946	0/0:41,0:41:99:0,123,3234	0/0:9,0:9:24.03:0,24,420	0/0:27,0:27:81.19:0,81,2018	0/0:19,0:19:51.11:0,51,1184	0/1:14,3:17:99:224,0,209	0/0:15,0:15:45.15:0,45,1397	1/1:17,2:18:11.75:340,12,0	0/1:11,0:11:64.20:218,0,64	0/0:14,0:14:30.35:0,30,957	0/0:28,0:28:84.23:0,84,2267	0/0:12,0:12:36.07:0,36,912	0/0:3,0:3:9.03:0,9,296	0/0:11,0:11:27.05:0,27,717	0/0:9,0:9:27.09:0,27,831	0/1:18,10:28:75.38:371,0,75	0/0:24,0:24:63.15:0,63,1833	0/0:25,0:25:69.20:0,69,1834	0/0:16,0:16:27.04:0,27,824
chr10	2876097	.	CA	C	1892.87	PASS	AB=0.809;AC=8;AF=0.143;AN=56;BaseQRankSum=8.493;DP=627;FS=0.428;HRun=10;HaplotypeScore=73.1082;InbreedingCoeff=0.7226;MQ=78.24;MQ0=0;MQRankSum=-0.978;QD=15.64;ReadPosRankSum=-1.338;VQSLOD=3.6738;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:81.19:0,81,879	0/0:7,0:7:21.06:0,21,232	0/0:18,0:18:21.75:0,22,237	0/1:18,0:18:4.05:4,0,148	0/0:31,0:32:90.06:0,90,962	0/0:28,0:29:81.05:0,81,877	0/0:20,0:20:48.12:0,48,523	1/1:8,27:35:80.96:700,81,0	0/0:18,1:19:31.06:0,31,553	0/0:23,0:23:57.14:0,57,622	0/0:18,0:18:45.11:0,45,489	0/0:31,0:32:78.03:0,78,830	0/0:46,0:46:99:0,123,1329	0/0:21,0:21:57.13:0,57,615	0/0:25,0:24:66.05:0,66,712	0/0:22,0:21:57.13:0,57,615	0/0:3,0:20:48.45:0,48,252	0/0:12,0:12:36.08:0,36,388	0/0:22,0:22:39.09:0,39,416	0/0:13,0:13:36.10:0,36,398	0/0:18,0:18:45.12:0,45,498	0/0:14,1:16:12.88:0,13,351	0/0:19,1:20:22.08:0,22,471	0/0:18,0:18:51.10:0,51,546	0/0:26,0:26:60.15:0,60,656	0/1:11,18:29:39.62:373,0,40	1/1:3,32:35:98.98:859,99,0	1/1:0,4:4:12:104,12,0
chr10	2877238	.	AAT	A	2062.35	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=6.753;DP=264;FS=0.568;HRun=0;HaplotypeScore=44.2973;InbreedingCoeff=0.7459;MQ=77.11;MQ0=0;MQRankSum=-2.342;QD=26.11;ReadPosRankSum=-3.997;VQSLOD=3.0629;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:27.09:0,27,441	0/0:2,0:2:6.02:0,6,106	0/1:11,0:8:2.97:3,0,73	0/0:12,0:10:5.89:0,6,42	0/0:13,0:13:39.13:0,39,692	0/0:20,0:20:60.17:0,60,987	0/0:4,0:4:9.03:0,9,160	1/1:4,32:36:96.28:1271,96,0	0/0:9,0:9:27.09:0,27,479	0/0:18,0:18:51.17:0,51,905	0/0:9,0:9:24.08:0,24,426	0/0:7,0:7:21.07:0,21,369	0/0:7,0:7:21.07:0,21,373	0/0:8,0:8:18.06:0,18,319	0/0:3,0:3:7.27:0,7,109	0/0:6,0:6:18.06:0,18,314	0/0:14,0:14:36.12:0,36,634	0/0:8,0:8:21.07:0,21,372	0/0:12,0:12:27.09:0,27,478	0/0:3,0:3:9.03:0,9,160	0/0:2,0:2:6.02:0,6,106	0/0:2,0:2:6.02:0,6,106	0/0:6,0:6:18.06:0,18,319	0/0:4,0:4:12.04:0,12,197	0/0:6,0:6:15.04:0,15,239	1/1:1,10:10:27.09:371,27,0	1/1:5,11:16:30.09:409,30,0	1/1:0,5:5:12.04:165,12,0
chr10	2877257	.	C	CATAT	477.04	PASS	AC=4;AF=0.077;AN=52;BaseQRankSum=-0.321;DP=293;FS=20.712;HRun=0;HaplotypeScore=70.1828;InbreedingCoeff=0.7963;MQ=57.30;MQ0=5;MQRankSum=1.541;QD=23.85;ReadPosRankSum=3.361;VQSLOD=1.3856;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:9:11.19:51,11,0	0/0:3,0:3:6.02:0,6,106	./.	./.	0/0:14,0:14:39.12:0,39,653	0/0:18,0:18:54.15:0,54,897	0/0:7,0:7:18.06:0,18,318	0/0:49,0:48:95.89:0,96,1014	0/0:11,0:11:24.08:0,24,416	0/0:18,0:18:54.15:0,54,922	0/0:11,0:11:30.10:0,30,514	0/0:10,0:10:27.06:0,27,413	0/0:9,0:9:24.06:0,24,395	0/0:9,0:9:24.07:0,24,396	0/0:3,0:3:3.01:0,3,53	0/0:8,0:8:24.08:0,24,424	1/1:2,9:11:21.07:539,21,0	0/0:7,0:7:18.06:0,18,294	0/0:11,0:11:33.10:0,33,542	0/0:6,0:6:18.05:0,18,284	0/0:7,0:7:21.07:0,21,353	0/0:4,0:4:12.01:0,12,156	0/0:10,0:10:30.08:0,30,486	0/0:5,0:5:12.04:0,12,206	0/0:8,0:8:14.89:0,15,265	0/0:9,0:8:24.06:0,24,263	0/0:12,0:12:15.03:0,15,157	0/0:9,0:9:23.99:0,24,223
chr10	2877267	.	CAT	C	1674.36	PASS	AC=8;AF=0.148;AN=54;BaseQRankSum=9.761;DP=309;FS=3.654;HRun=0;HaplotypeScore=56.4561;InbreedingCoeff=0.8607;MQ=54.69;MQ0=9;MQRankSum=-10.555;QD=22.32;ReadPosRankSum=-2.893;VQSLOD=3.1320;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:5:12.04:0,12,202	0/0:3,0:3:6.02:0,6,100	0/0:7,0:3:0:0,0,0	./.	0/0:16,0:16:42.10:0,42,645	0/0:21,0:21:63.18:0,63,1003	0/0:6,0:6:18.06:0,18,314	1/1:17,28:43:98.78:1103,99,0	0/0:11,0:11:30.09:0,30,496	0/0:20,0:20:57.19:0,57,982	0/0:13,0:13:36.11:0,36,599	0/0:10,0:10:30.10:0,30,524	0/0:9,0:9:27.07:0,27,448	0/0:13,0:13:36.12:0,36,619	0/0:3,0:3:3.01:0,3,53	0/0:11,0:11:33.04:0,33,512	0/0:8,0:8:21.07:0,21,331	0/0:6,0:7:18.03:0,18,254	0/0:18,0:15:35.10:0,35,451	0/0:8,0:8:24.08:0,24,415	0/0:9,0:9:27.09:0,27,473	0/0:6,0:6:18.06:0,18,303	0/0:11,0:11:30.09:0,30,497	0/0:4,0:4:12.04:0,12,213	0/0:7,0:7:15.05:0,15,266	1/1:0,9:8:23.99:286,24,0	1/1:1,11:12:20.63:232,21,0	1/1:4,5:9:18.01:207,18,0
chr10	2879947	.	A	AAG	2681.48	PASS	AB=0.571;AC=7;AF=0.125;AN=56;BaseQRankSum=-6.953;DP=865;FS=0.474;HRun=0;HaplotypeScore=108.3044;InbreedingCoeff=0.7936;MQ=68.55;MQ0=10;MQRankSum=0.562;QD=24.60;ReadPosRankSum=-1.027;VQSLOD=4.2573;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,111,1335	0/0:13,0:13:21.06:0,21,255	0/0:35,0:18:3.21:0,3,163	0/0:84,0:34:20.85:0,21,318	0/0:33,0:33:87.26:0,87,1045	0/0:25,0:25:54.16:0,54,655	0/0:29,0:29:59.98:0,60,681	1/1:15,18:33:54.16:818,54,0	0/0:21,0:21:51.14:0,51,607	0/0:29,0:30:71.87:0,72,817	0/0:29,0:29:66.06:0,66,770	0/0:20,0:20:48.15:0,48,581	0/0:35,0:35:78.24:0,78,946	0/0:20,0:20:54.15:0,54,643	0/0:45,0:45:96.26:0,96,1131	0/0:29,1:30:44.08:0,44,675	0/0:36,0:36:93.04:0,93,1061	0/0:19,0:19:11.34:0,11,509	0/0:23,0:21:39.12:0,39,473	0/0:30,0:30:72.20:0,72,852	0/0:23,0:23:57.15:0,57,668	0/0:36,0:36:86.89:0,87,975	0/0:28,0:28:72.22:0,72,873	0/0:33,0:33:78.08:0,78,924	0/0:28,0:28:69.21:0,69,837	1/1:10,20:32:63.16:931,63,0	0/1:9,27:35:9.50:837,0,10	1/1:0,8:8:15.05:242,15,0
chr10	2882302	.	C	CCCTT	1698.66	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=6.366;DP=693;FS=7.143;HRun=0;HaplotypeScore=132.0759;InbreedingCoeff=0.8282;MQ=60.03;MQ0=3;MQRankSum=0.470;QD=22.95;ReadPosRankSum=3.945;VQSLOD=3.1086;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:42.06:0,42,650	0/1:14,0:14:46.35:46,0,331	0/0:20,0:14:32.80:0,33,416	0/0:25,0:13:22.76:0,23,346	0/0:19,0:19:51.16:0,51,916	0/0:19,0:19:54.18:0,54,984	0/0:23,0:22:60.18:0,60,1025	0/0:28,0:28:66.21:0,66,1092	0/0:23,0:23:69.19:0,69,1158	0/0:24,0:24:63.20:0,63,1085	0/0:19,0:18:51.61:0,52,876	0/0:31,0:31:90.29:0,90,1584	0/0:30,0:30:87.20:0,87,1485	0/0:31,0:31:80.98:0,81,1361	0/0:46,0:46:72.86:0,73,1133	0/0:27,0:27:72.21:0,72,1226	0/0:1,0:28:14.48:0,14,109	0/0:17,0:17:35.99:0,36,516	0/0:20,0:20:57.18:0,57,949	0/0:27,0:27:81.27:0,81,1485	0/0:28,0:28:81.22:0,81,1348	0/0:16,0:16:48.16:0,48,832	0/0:26,0:26:69.19:0,69,1147	0/0:32,0:32:87.25:0,87,1458	0/0:30,0:30:63.22:0,63,1053	1/1:4,13:18:26.53:391,27,0	1/1:8,15:25:19.30:696,19,0	1/1:3,14:17:29.57:713,30,0
chr10	2882306	.	GCCTTCCTT	G	4100.74	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=10.001;DP=686;FS=1.754;HRun=0;HaplotypeScore=165.1569;InbreedingCoeff=0.8521;MQ=59.85;MQ0=3;MQRankSum=-11.380;QD=24.26;ReadPosRankSum=2.213;VQSLOD=3.4984;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,22:27:27.09:623,27,0	0/0:6,0:15:30.10:0,30,867	0/0:17,0:11:3.01:0,3,73	0/1:24,0:12:8.95:9,0,165	0/0:18,0:19:51.09:0,51,1877	0/0:20,0:20:45.15:0,45,1797	0/0:22,0:21:42.14:0,42,1389	0/0:25,0:25:24.07:0,24,673	0/0:25,0:25:66.21:0,66,2355	0/0:25,0:25:60.20:0,60,2161	0/0:20,0:19:45.15:0,45,1809	0/0:30,0:30:75.24:0,75,2620	0/0:30,0:30:69.22:0,69,2661	0/0:29,0:29:62.60:0,63,2513	1/1:5,38:43:63.62:1555,64,0	0/0:29,0:29:62.82:0,63,2018	1/1:27,0:27:15.04:252,15,0	1/1:9,8:17:12.04:306,12,0	0/0:23,0:22:27.09:0,27,939	0/0:28,0:28:78.26:0,78,3035	0/0:28,0:29:69.10:0,69,2154	0/0:18,0:18:39.13:0,39,1425	0/0:25,0:25:63.22:0,63,2514	0/0:30,0:30:60.21:0,60,2405	1/1:3,27:30:54.19:1355,54,0	0/0:16,0:16:33.11:0,33,1002	0/0:25,0:25:48.12:0,48,1438	0/0:17,0:17:36.10:0,36,1100
chr10	2882526	.	AC	A	788.48	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.447;DP=605;FS=2.183;HRun=1;HaplotypeScore=77.2796;InbreedingCoeff=0.9222;MQ=79.38;MQ0=0;MQRankSum=-2.109;QD=20.75;ReadPosRankSum=2.402;VQSLOD=4.0128;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:96.27:0,96,1444	0/0:9,0:9:27.08:0,27,406	0/0:13,0:13:36.09:0,36,524	0/0:25,0:25:38.83:0,39,826	0/0:29,0:29:81.23:0,81,1229	0/0:19,0:19:57.16:0,57,856	0/0:25,0:25:75.25:0,75,1170	0/0:31,0:31:93.26:0,93,1350	0/0:19,0:19:57.19:0,57,903	0/0:27,0:27:81.12:0,81,1171	0/0:15,0:15:42.13:0,42,626	0/0:22,0:22:66.23:0,66,1048	0/0:25,0:25:75.21:0,75,1115	0/0:15,0:15:45.12:0,45,664	0/0:30,0:29:90.20:0,90,1345	0/0:18,0:18:54.16:0,54,811	0/0:31,0:31:77.78:0,78,629	0/0:22,0:22:66.15:0,66,948	0/0:24,0:24:69.23:0,69,1095	0/0:18,0:18:54.18:0,54,858	0/0:21,0:21:60:0,60,872	0/0:19,0:19:54.05:0,54,776	0/0:25,0:24:75.12:0,75,1112	0/0:28,0:28:84.26:0,84,1288	0/0:25,0:25:75.24:0,75,1170	1/1:3,19:22:12.24:496,12,0	1/1:0,15:15:42.07:401,42,0	1/1:1,0:1:2.97:20,3,0
chr10	2883377	.	T	TTAAATAAATAAATAAA	2233.53	PASS	AB=0.800;AC=7;AF=0.125;AN=56;BaseQRankSum=3.365;DP=499;FS=4.431;HRun=0;HaplotypeScore=208.0978;InbreedingCoeff=0.6972;MQ=70.13;MQ0=0;MQRankSum=-5.981;QD=43.79;ReadPosRankSum=-2.674;VQSLOD=2.6836;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:75.26:0,75,3158	0/0:12,0:12:30.10:0,30,1321	0/0:10,0:10:6.02:0,6,194	0/0:14,0:13:3:0,3,52	0/0:28,0:28:54.18:0,54,2374	0/0:21,0:21:51.16:0,51,1927	0/0:9,0:9:24.08:0,24,1043	0/0:38,0:38:54.17:0,54,1904	0/0:19,0:18:39.13:0,39,1675	0/0:25,0:24:52.14:0,52,2221	0/0:21,0:21:45.15:0,45,1732	0/0:20,0:20:39.12:0,39,1448	0/0:7,0:7:12.04:0,12,424	0/0:15,0:15:33.11:0,33,1454	0/0:13,0:13:30.09:0,30,1133	0/0:23,0:23:51.18:0,51,2175	1/1:8,0:11:18.06:333,18,0	0/0:21,0:21:48.15:0,48,1937	0/0:15,0:15:21.06:0,21,800	0/0:36,0:36:84.27:0,84,3208	0/0:3,0:3:9.03:0,9,399	0/0:21,0:21:33.11:0,33,1430	0/0:17,0:17:30.08:0,30,979	0/0:6,0:6:18.06:0,18,750	0/0:19,0:19:48.15:0,48,1838	0/1:12,3:16:99:791,0,115	1/1:11,0:11:5.99:99,6,0	1/1:9,2:13:18.06:1150,18,0
chr10	2883566	.	TTATGATTAATGTATGATACATG	T	2022.06	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=8.081;DP=630;FS=2.822;HRun=0;HaplotypeScore=339.8988;InbreedingCoeff=0.9308;MQ=69.69;MQ0=0;MQRankSum=-6.561;QD=26.61;ReadPosRankSum=-0.401;VQSLOD=1.6782;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:54.19:0,54,4694	0/0:8,0:8:15.04:0,15,1039	0/0:9,0:9:12.02:0,12,262	0/0:9,0:9:12.31:0,12,321	0/0:23,0:23:48.15:0,48,4079	0/0:26,0:26:69.21:0,69,5325	0/0:18,0:18:42.14:0,42,3234	0/0:55,0:55:99:0,102,5709	0/0:20,0:20:42.14:0,42,3631	0/0:29,0:29:66.23:0,66,5783	0/0:28,0:28:54.16:0,54,3925	0/0:22,0:22:45.15:0,45,4324	0/0:24,0:24:60.21:0,60,5014	0/0:25,0:25:66.23:0,66,5339	0/0:29,0:29:81.26:0,81,7221	0/0:35,0:35:84.25:0,84,5868	1/1:5,12:17:5.98:195,6,0	0/0:16,0:16:39.12:0,39,3125	0/0:21,0:21:36.10:0,36,1578	0/0:20,0:20:45.15:0,45,4117	0/0:19,0:19:30.09:0,30,2741	0/0:19,0:19:51.16:0,51,4474	0/0:26,0:26:60.17:0,60,4762	0/0:20,0:20:48.13:0,48,3781	0/0:27,0:27:66.19:0,66,5517	1/1:13,15:28:38.68:574,39,0	1/1:5,12:17:12.04:700,12,0	1/1:3,11:14:12.04:700,12,0
chr10	2884996	.	G	GA	5465.47	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=12.744;DP=696;FS=0.766;HRun=1;HaplotypeScore=80.1036;InbreedingCoeff=0.9839;MQ=63.90;MQ0=0;MQRankSum=-1.796;QD=44.80;ReadPosRankSum=2.245;VQSLOD=4.5070;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,1:43:99:0,106,1679	0/0:3,0:3:9.03:0,9,126	0/0:25,0:22:63.18:0,63,843	0/0:20,0:20:54.09:0,54,716	0/0:26,0:26:75.25:0,75,1048	0/0:20,0:20:60.20:0,60,838	0/0:30,1:31:42.67:0,43,1135	0/0:34,0:34:99:0,99,1352	0/0:24,0:24:72.24:0,72,1004	0/0:18,0:18:54.18:0,54,749	0/0:14,0:14:39.13:0,39,545	0/0:16,0:16:42.14:0,42,587	0/0:37,0:37:99:0,111,1551	0/0:24,0:24:72.24:0,72,1007	0/0:39,0:39:99:0,111,1550	0/0:25,0:25:75.25:0,75,1048	1/1:1,34:35:93.32:1486,93,0	0/0:37,0:37:88.45:0,88,1429	0/0:13,0:13:39.13:0,39,546	0/0:23,0:23:69.23:0,69,965	0/0:29,0:29:87.29:0,87,1214	0/0:14,0:14:39.12:0,39,544	0/0:16,0:16:42.12:0,42,569	0/0:21,0:21:57.19:0,57,797	0/0:22,0:22:66.19:0,66,888	1/1:0,31:31:93.32:1487,93,0	1/1:0,37:37:99:1582,99,0	1/1:0,19:19:57.19:911,57,0
chr10	2885253	.	GACCC	G	95.60	PASS	AB=0.875;AC=2;AF=0.038;AN=52;BaseQRankSum=2.277;DP=248;FS=43.261;HRun=0;HaplotypeScore=70.0372;InbreedingCoeff=-0.0774;MQ=52.26;MQ0=4;MQRankSum=-1.418;QD=3.30;ReadPosRankSum=5.265;VQSLOD=-0.5424;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:27.87:0,28,303	./.	0/0:13,0:5:14.49:0,14,173	0/0:13,0:6:8.84:0,9,77	0/0:4,0:4:3.01:0,3,54	0/0:6,0:6:17.90:0,18,278	0/0:19,1:19:15.78:0,16,664	0/0:9,0:9:26.95:0,27,235	0/0:10,0:10:23.39:0,23,345	0/0:4,0:4:8.65:0,9,68	./.	0/0:8,0:7:11.67:0,12,100	0/0:7,0:7:17.76:0,18,212	0/0:3,0:2:5.97:0,6,95	0/0:17,0:18:41.88:0,42,481	0/0:12,0:12:26.95:0,27,520	0/1:23,0:23:90.76:91,0,194	0/0:10,0:12:23.76:0,24,276	0/0:9,0:9:26.96:0,27,300	0/0:3,0:3:8.80:0,9,93	0/0:16,0:16:28.19:0,28,368	0/0:1,0:1:2.96:0,3,19	0/0:4,0:4:5.90:0,6,37	0/0:14,0:14:38.25:0,38,571	0/0:4,0:5:8.91:0,9,77	0/0:6,1:6:5.95:0,6,42	0/1:4,2:6:18.97:92,0,19	0/0:3,0:2:2.99:0,3,23
chr10	2885443	.	A	AT	1134.47	PASS	AB=0.766;AC=14;AF=0.250;AN=56;BaseQRankSum=9.791;DP=297;FS=17.563;HRun=0;HaplotypeScore=49.7188;InbreedingCoeff=-0.3813;MQ=43.74;MQ0=0;MQRankSum=-7.122;QD=6.34;ReadPosRankSum=7.319;VQSLOD=1.0812;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:18.03:0,18,234	0/1:1,2:3:32.86:65,0,33	0/0:8,0:5:3.77:0,4,102	0/0:3,0:2:5.75:0,6,54	0/0:5,3:7:8.94:0,9,76	0/0:7,0:7:15.01:0,15,176	0/1:22,4:25:78.44:78,0,392	0/1:8,4:11:99:109,0,200	0/1:12,4:16:93.19:93,0,437	0/1:5,3:6:71.84:72,0,149	0/0:6,1:6:11.87:0,12,104	0/1:8,8:15:99:229,0,159	0/1:9,3:12:77.61:78,0,248	0/1:8,2:10:37.99:38,0,223	0/1:13,10:23:99:277,0,189	0/1:12,2:14:32.36:32,0,383	0/0:14,0:14:27.09:0,27,344	0/0:12,0:12:33.11:0,33,453	0/0:6,0:6:17.93:0,18,225	0/1:11,4:15:99:99,0,228	0/0:17,0:17:33.06:0,33,443	0/0:2,0:2:3.01:0,3,36	0/1:7,2:9:20.39:20,0,36	0/0:16,1:17:27.06:0,27,371	0/1:6,2:8:56.65:57,0,216	0/0:4,0:4:12.01:0,12,147	0/1:4,3:6:38:38,0,141	0/0:2,0:2:3.01:0,3,38
chr10	2885860	.	GA	G	2996.99	PASS	AB=0.719;AC=16;AF=0.286;AN=56;BaseQRankSum=9.559;DP=567;FS=0.778;HRun=11;HaplotypeScore=65.0324;InbreedingCoeff=0.7929;MQ=59.10;MQ0=13;MQRankSum=0.633;QD=14.48;ReadPosRankSum=3.861;VQSLOD=4.2043;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,21:29:7.94:477,8,0	0/0:10,0:10:26.90:0,27,269	0/1:26,4:13:50.07:50,0,116	0/0:31,0:14:15.74:0,16,146	0/0:21,0:21:53.97:0,54,556	0/0:13,0:13:32.92:0,33,334	0/0:27,0:26:69.04:0,69,717	0/0:33,3:36:7.42:0,7,666	0/0:14,0:12:23.26:0,23,222	0/0:17,0:17:41.43:0,41,406	0/0:14,0:14:39.10:0,39,412	0/0:20,0:19:45.11:0,45,477	0/0:16,0:15:42.06:0,42,434	0/0:9,0:11:26.90:0,27,270	1/1:2,16:18:38.94:320,39,0	0/0:17,0:16:45.10:0,45,472	1/1:6,18:22:43.96:351,44,0	1/1:2,22:24:62.92:515,63,0	0/0:22,1:21:26.48:0,26,487	0/0:18,0:17:48.09:0,48,500	0/0:7,0:8:23.81:0,24,213	0/0:20,0:19:48.12:0,48,510	0/0:20,1:21:13.95:0,14,333	0/0:14,1:18:23.18:0,23,419	1/1:5,16:21:44.93:369,45,0	0/1:5,20:25:27.01:424,0,27	1/1:7,17:20:50.93:418,51,0	1/1:1,10:11:32.96:271,33,0
chr10	2887477	.	CATCT	C	2591.29	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=8.779;DP=640;FS=12.107;HRun=0;HaplotypeScore=103.7898;InbreedingCoeff=0.9524;MQ=61.94;MQ0=0;MQRankSum=-4.137;QD=30.49;ReadPosRankSum=3.498;VQSLOD=3.1082;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,19:20:33.04:556,33,0	0/0:9,0:9:21.07:0,21,546	0/0:17,0:17:42.13:0,42,1002	0/0:16,0:16:42.14:0,42,1058	0/0:45,0:45:99:0,123,3000	0/0:24,0:24:63.20:0,63,1527	0/0:19,0:19:54.17:0,54,1321	0/0:39,0:39:99:0,99,2467	0/0:12,0:12:33.11:0,33,844	0/0:24,0:24:69.24:0,69,1765	0/0:27,0:27:78.27:0,78,1988	0/0:29,0:29:81.24:0,81,1919	0/0:23,0:23:60.19:0,60,1470	0/0:18,0:18:54.19:0,54,1393	1/1:1,19:20:42.10:721,42,0	0/0:23,2:25:3.25:0,3,1296	0/0:27,0:27:78.27:0,78,1987	1/1:2,19:21:45.15:809,45,0	0/0:17,0:17:45.15:0,45,1140	0/0:26,0:26:75.26:0,75,1949	0/0:18,0:18:48.16:0,48,1239	0/0:29,0:29:84.27:0,84,2031	0/0:26,0:26:75.26:0,75,1890	0/0:16,0:16:45.14:0,45,1115	1/1:2,22:24:39.09:665,39,0	0/0:30,0:30:87.29:0,87,2157	0/0:32,0:32:96.28:0,96,2246	0/0:7,0:7:21.03:0,21,487
chr10	2888316	.	A	ATCTT	6544.97	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-8.218;DP=647;FS=0.902;HRun=0;HaplotypeScore=102.5735;InbreedingCoeff=0.9490;MQ=85.16;MQ0=0;MQRankSum=-4.863;QD=70.38;ReadPosRankSum=1.094;VQSLOD=7.0440;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,114,2162	0/0:8,0:8:24.08:0,24,479	0/0:24,0:24:66.23:0,66,1254	0/0:17,0:17:51.15:0,51,947	0/0:17,0:17:51.18:0,51,1018	0/0:26,0:26:69.21:0,69,1307	0/0:19,0:19:57.15:0,57,1065	0/0:27,0:27:69.24:0,69,1352	0/0:35,0:35:99:0,102,2001	0/0:22,0:22:66.23:0,66,1318	0/0:15,0:15:42.14:0,42,823	0/0:24,0:24:72.23:0,72,1402	0/0:26,0:26:72.25:0,72,1433	0/0:25,0:25:75.26:0,75,1498	0/0:23,0:23:69.24:0,69,1378	0/0:23,0:23:63.22:0,63,1258	1/1:4,35:40:99:2791,105,0	0/0:14,0:14:42.14:0,42,839	0/0:21,0:21:57.19:0,57,1101	0/0:24,0:24:72.25:0,72,1400	0/0:30,0:30:87.30:0,87,1738	0/0:18,0:18:54.19:0,54,1079	0/0:22,0:22:63.20:0,63,1223	0/0:38,0:38:99:0,114,2237	0/0:17,0:17:51.16:0,51,983	1/1:4,25:31:93.31:2501,93,0	1/1:5,13:19:48.12:1168,48,0	1/1:0,1:2:3.01:84,3,0
chr10	2889072	.	A	AT	4097.71	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-13.397;DP=472;FS=13.598;HRun=6;HaplotypeScore=41.7968;InbreedingCoeff=0.9650;MQ=74.05;MQ0=0;MQRankSum=0.404;QD=32.52;ReadPosRankSum=-1.676;VQSLOD=2.0258;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,22:25:63.20:791,63,0	0/0:4,0:4:12.03:0,12,122	0/0:8,0:8:17.99:0,18,162	0/0:8,0:8:13.58:0,14,131	0/0:28,0:28:75.17:0,75,765	0/0:26,0:26:75.16:0,75,758	0/0:16,0:16:33.07:0,33,336	1/1:4,36:40:99:1344,108,0	0/0:9,0:9:21.04:0,21,214	0/0:23,0:23:63.14:0,63,642	0/0:20,0:20:51.11:0,51,520	0/0:13,0:13:39.08:0,39,391	0/0:19,0:19:45.09:0,45,459	0/0:8,0:8:18.04:0,18,184	1/1:2,17:19:45.14:566,45,0	0/0:11,0:11:30.07:0,30,306	0/0:18,0:18:48.11:0,48,490	1/1:2,13:15:33.11:415,33,0	0/0:23,0:23:60.11:0,60,600	0/0:29,0:29:81.18:0,81,824	0/0:10,0:10:27.06:0,27,275	0/0:7,0:7:15.03:0,15,153	0/0:17,0:17:45.10:0,45,459	0/0:9,0:9:21.05:0,21,214	1/1:1,26:27:78.25:981,78,0	0/0:20,0:20:57.13:0,57,581	0/0:17,0:15:42.09:0,42,428	0/0:3,0:3:9.02:0,9,92
chr10	2889607	.	TA	T	1171.42	PASS	AB=0.986;AC=4;AF=0.071;AN=56;BaseQRankSum=4.345;DP=619;FS=8.162;HRun=1;HaplotypeScore=67.1154;InbreedingCoeff=0.4456;MQ=79.53;MQ0=0;MQRankSum=-0.549;QD=13.46;ReadPosRankSum=-5.823;VQSLOD=0.0959;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:10.72:0,11,106	0/0:11,0:11:33.10:0,33,453	0/0:20,0:20:56.80:0,57,708	0/0:9,0:9:26.74:0,27,278	0/0:34,0:34:99:0,102,1416	0/0:17,0:17:51.14:0,51,691	0/0:14,0:14:42.12:0,42,579	1/1:0,31:31:93.25:1212,93,0	0/0:19,0:19:57.16:0,57,777	0/0:43,0:43:99:0,123,1728	0/0:29,0:29:87.28:0,87,1223	0/0:16,0:16:48.15:0,48,667	0/0:22,0:22:66.19:0,66,907	0/0:22,0:22:66.16:0,66,869	0/0:26,0:26:24.12:0,24,112	0/0:19,0:19:57.19:0,57,814	0/0:30,0:30:90.11:0,90,1176	0/1:21,0:21:21.92:22,0,87	0/0:25,0:25:75.01:0,75,949	0/0:30,0:30:90.26:0,90,1228	0/0:5,0:5:15.05:0,15,213	0/0:25,0:25:75.23:0,75,1036	0/0:20,0:20:60.14:0,60,783	0/0:13,0:13:39.07:0,39,482	0/1:34,1:35:52.99:53,0,119	0/0:25,0:25:75.24:0,75,1057	0/0:27,0:27:81.22:0,81,1098	0/0:8,0:8:24.04:0,24,301
chr10	2890092	.	CAT	C	3468.25	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.366;DP=744;FS=12.853;HRun=0;HaplotypeScore=92.5372;InbreedingCoeff=0.9995;MQ=82.64;MQ0=0;MQRankSum=-3.741;QD=42.30;ReadPosRankSum=1.809;VQSLOD=4.8003;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,138,2655	0/0:9,0:9:27.09:0,27,521	0/0:25,0:25:69.21:0,69,1235	0/0:17,0:17:47.46:0,47,770	0/0:33,0:33:96.16:0,96,1841	0/0:28,0:28:78.25:0,78,1463	0/0:20,0:20:60.21:0,60,1158	0/0:26,0:26:72.25:0,72,1391	0/0:24,0:24:72.21:0,72,1309	0/0:28,0:28:84.27:0,84,1562	0/0:16,0:16:48.13:0,48,860	0/0:21,0:21:63.20:0,63,1174	0/0:28,0:28:84.27:0,84,1565	0/0:30,0:30:90.29:0,90,1685	0/0:29,0:29:87.28:0,87,1638	0/0:24,0:23:72.25:0,72,1382	0/0:34,0:34:99:0,102,1906	0/0:16,0:16:48.14:0,48,892	0/0:26,0:26:78.25:0,78,1437	0/0:33,0:33:99:0,99,1768	0/0:38,0:38:99:0,111,2067	0/0:19,0:19:57.20:0,57,1092	0/0:30,0:30:87.27:0,87,1635	0/0:37,0:37:99:0,111,2143	0/0:25,0:25:75.24:0,75,1409	1/1:0,30:30:87.28:1312,87,0	1/1:0,40:40:99:1652,108,0	1/1:0,12:12:33.11:505,33,0
chr10	2890590	.	ACT	A	1317.15	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.746;DP=639;FS=7.886;HRun=0;HaplotypeScore=77.7345;InbreedingCoeff=0.9988;MQ=86.55;MQ0=0;MQRankSum=0.033;QD=41.16;ReadPosRankSum=-4.895;VQSLOD=3.2432;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:63.22:0,63,1243	0/0:15,0:15:45.15:0,45,885	0/0:21,0:21:51.77:0,52,1104	0/0:21,0:22:45.29:0,45,1088	0/0:20,0:20:60.21:0,60,1218	0/0:31,0:31:93.31:0,93,1852	0/0:28,0:28:84.27:0,84,1669	1/1:0,32:32:96.22:1412,96,0	0/0:23,0:23:69.24:0,69,1401	0/0:25,0:25:75.26:0,75,1501	0/0:25,0:25:75.26:0,75,1492	0/0:13,0:13:39.13:0,39,792	0/0:22,0:22:66.20:0,66,1244	0/0:28,0:28:84.27:0,84,1670	0/0:25,0:25:75.21:0,75,1402	0/0:23,0:23:69.22:0,69,1354	0/0:20,0:20:60.18:0,60,1157	0/0:9,0:9:27.07:0,27,497	0/0:17,0:17:51.13:0,51,921	0/0:34,0:34:99:0,102,2034	0/0:20,0:20:60.21:0,60,1191	0/0:19,0:19:57.18:0,57,1121	0/0:27,0:27:81.23:0,81,1515	0/0:31,0:31:93.29:0,93,1801	0/0:20,0:20:60.21:0,60,1206	0/0:22,0:22:66.22:0,66,1298	0/0:33,0:33:99:0,99,1937	0/0:12,0:12:36.11:0,36,678
chr10	2891425	.	G	GT	5812.95	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=3.442;DP=714;FS=14.068;HRun=4;HaplotypeScore=75.9942;InbreedingCoeff=0.9958;MQ=75.42;MQ0=0;MQRankSum=-2.636;QD=37.03;ReadPosRankSum=-1.276;VQSLOD=3.1140;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,31:31:81.27:1108,81,0	0/0:10,0:10:27.06:0,27,295	0/0:26,0:26:65.52:0,66,760	0/0:22,0:22:45.06:0,45,562	0/0:32,0:32:87.25:0,87,984	0/0:31,0:31:87.18:0,87,951	0/0:25,0:25:72.19:0,72,806	1/1:2,49:51:99:1935,144,0	0/0:22,0:22:54.15:0,54,613	0/0:27,0:27:66.15:0,66,729	0/0:25,0:25:63.18:0,63,715	0/0:23,0:23:69.18:0,69,769	0/0:35,0:35:93.26:0,93,1054	0/0:20,0:20:57.16:0,57,647	1/1:1,24:25:72.10:959,72,0	0/0:24,0:24:69.20:0,69,782	0/0:29,0:29:78.22:0,78,884	1/1:2,20:22:26.70:744,27,0	0/0:15,0:15:39.11:0,39,442	0/0:28,0:28:81.23:0,81,917	0/0:23,0:23:69.20:0,69,781	0/0:30,0:30:81.23:0,81,917	0/0:17,0:17:42.12:0,42,476	0/0:38,0:38:99:0,105,1190	1/1:1,27:28:78.26:1066,78,0	0/0:24,0:24:72.21:0,72,815	0/0:26,0:26:78.22:0,78,884	0/0:5,0:5:15.02:0,15,158
chr10	2891600	.	C	CT	5928.18	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-4.763;DP=703;FS=0.000;HRun=0;HaplotypeScore=73.5050;InbreedingCoeff=0.9990;MQ=82.33;MQ0=0;MQRankSum=-1.726;QD=42.34;ReadPosRankSum=-1.051;VQSLOD=4.8589;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,26:26:72.25:1150,72,0	0/0:13,0:13:39.13:0,39,545	0/0:24,0:24:69.11:0,69,878	0/0:17,0:17:45.15:0,45,628	0/0:25,0:25:75.25:0,75,1045	0/0:28,0:28:84.25:0,84,1136	0/0:18,0:18:54.18:0,54,755	1/1:3,34:37:99:1614,105,0	0/0:26,0:26:75.25:0,75,1047	0/0:33,0:33:96.32:0,96,1342	0/0:28,0:28:78.26:0,78,1086	0/0:32,0:32:96.32:0,96,1339	0/0:30,0:30:90.30:0,90,1258	0/0:24,0:24:69.22:0,69,947	1/1:0,24:24:54.18:861,54,0	0/0:30,0:30:87.29:0,87,1216	0/0:25,0:25:66.22:0,66,922	1/1:0,26:26:72.25:1151,72,0	0/0:18,0:18:54.17:0,54,737	0/0:33,0:33:96.29:0,96,1305	0/0:28,0:28:84.28:0,84,1175	0/0:31,0:31:90.30:0,90,1258	0/0:23,0:23:69.23:0,69,965	0/0:22,0:22:63.21:0,63,881	1/1:1,26:27:72.25:1151,72,0	0/0:17,0:17:51.17:0,51,711	0/0:31,0:31:93.31:0,93,1299	0/0:7,0:7:21.07:0,21,292
chr10	2891751	.	CGT	C	627.45	PASS	AB=0.915;AC=19;AF=0.339;AN=56;BaseQRankSum=4.071;DP=679;FS=0.569;HRun=0;HaplotypeScore=119.6298;InbreedingCoeff=-0.3175;MQ=64.24;MQ0=5;MQRankSum=1.617;QD=1.43;ReadPosRankSum=1.836;VQSLOD=2.0416;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:31,0:31:2.46:9,2,0	0/1:10,6:16:95.46:95,0,365	0/1:28,0:18:0:0,0,0	0/0:26,0:13:3.01:0,3,41	0/1:23,1:25:6.57:7,0,318	0/1:22,2:24:25.14:25,0,481	0/1:18,4:22:37.22:37,0,326	0/1:27,0:27:15.61:16,0,57	0/1:15,4:20:67.83:68,0,294	0/1:17,1:18:3.56:4,0,366	0/0:19,4:23:2.44:0,2,443	0/1:28,4:32:71.28:71,0,706	0/1:29,1:31:81.16:81,0,380	0/1:26,1:27:58.80:59,0,431	0/1:19,0:19:0.10:0,0,0	0/0:8,0:22:45.03:0,45,453	0/0:23,0:23:11.99:0,12,100	0/0:17,0:17:14.39:0,14,121	0/1:12,2:14:65.45:65,0,77	0/1:21,0:22:27.32:27,0,414	0/0:35,3:37:33.03:0,33,898	0/1:29,0:30:24.01:24,0,517	0/1:19,2:22:48.95:49,0,295	0/1:25,5:31:99:136,0,616	0/0:25,0:25:6.45:0,6,54	0/0:26,0:26:22.64:0,23,248	0/0:34,0:33:38.03:0,38,394	0/0:5,0:5:8.98:0,9,81
chr10	2891783	.	T	TGTGTGTGTGC	1669.12	PASS	AB=0.916;AC=14;AF=0.250;AN=56;BaseQRankSum=10.229;DP=703;FS=17.035;HRun=0;HaplotypeScore=223.8248;InbreedingCoeff=0.6069;MQ=53.16;MQ0=8;MQRankSum=-10.152;QD=8.06;ReadPosRankSum=-0.920;VQSLOD=1.2699;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:37,0:37:99:127,0,102	0/0:19,0:19:51.08:0,51,1142	0/0:21,0:3:2.18:0,2,58	0/0:22,0:4:9:0,9,83	0/0:18,0:18:51.05:0,51,969	0/0:22,0:22:63.11:0,63,1457	0/0:29,0:29:77.94:0,78,1107	1/1:18,0:18:8.19:320,8,0	0/0:23,0:23:57.07:0,57,1005	0/0:24,0:24:66.06:0,66,1124	0/0:23,0:23:57.05:0,57,1029	0/0:31,0:31:84.11:0,84,1965	0/0:28,0:28:69.01:0,69,1087	0/0:27,0:27:75.09:0,75,1525	0/1:25,0:24:0.01:0,0,0	0/0:23,0:23:57.10:0,57,832	1/1:10,16:33:15.48:557,15,0	1/1:11,0:11:14.83:202,15,0	0/0:16,0:16:42.04:0,42,550	0/0:27,0:27:60.51:0,61,1020	0/0:50,0:50:99:0,123,2272	0/0:36,0:36:70.31:0,70,1228	0/0:20,0:20:54.07:0,54,1129	0/0:37,0:37:99:0,99,2086	1/1:27,0:27:8.11:224,8,0	0/1:18,0:19:99:175,0,100	0/1:18,0:29:99:123,0,99	1/1:7,0:7:20.31:113,20,0
chr10	2891785	.	T	TGTGTGTGTATGTGTGC	1525.71	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=6.212;DP=686;FS=6.089;HRun=0;HaplotypeScore=282.6420;InbreedingCoeff=0.6125;MQ=53.46;MQ0=8;MQRankSum=-7.046;QD=10.60;ReadPosRankSum=-1.483;VQSLOD=1.6573;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:31,0:32:99:109,0,120	0/0:19,0:19:51.14:0,51,1601	0/0:21,0:3:8.60:0,9,101	0/0:20,0:3:8.92:0,9,91	0/0:19,0:19:54.15:0,54,1483	0/0:21,0:21:63.19:0,63,2134	0/0:29,0:29:78.21:0,78,1736	1/1:15,0:16:7.97:350,8,0	0/0:23,0:23:57.17:0,57,1388	0/0:24,0:24:69.14:0,69,1716	0/0:22,0:22:57.12:0,57,1456	0/0:32,0:32:87.72:0,88,2831	0/0:27,0:27:69.19:0,69,1592	0/0:25,0:25:75.23:0,75,2219	0/1:23,0:24:0:0,0,0	0/0:22,0:22:57.18:0,57,1522	0/1:28,0:28:19.12:376,0,19	1/1:7,0:10:15.01:327,15,0	0/0:17,0:17:45.14:0,45,887	0/0:26,0:26:60.19:0,60,1558	0/0:53,0:53:99:0,135,3447	0/0:33,0:33:78.57:0,79,1903	0/0:22,0:22:63.13:0,63,1666	0/0:36,0:36:99:0,99,3013	1/1:13,8:33:7.51:504,8,0	0/0:16,0:18:21.86:0,22,520	0/0:25,0:25:15.44:0,15,618	0/0:7,0:7:21.07:0,21,286
chr10	2891786	.	GCA	G	490.76	PASS	AB=0.983;AC=13;AF=0.232;AN=56;BaseQRankSum=8.412;DP=653;FS=10.154;HRun=0;HaplotypeScore=112.7386;InbreedingCoeff=0.5291;MQ=54.12;MQ0=8;MQRankSum=-4.708;QD=2.97;ReadPosRankSum=-2.847;VQSLOD=1.1954;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:28,2:30:2.38:10,2,0	0/0:19,0:19:53.69:0,54,722	0/0:20,0:3:8.83:0,9,92	0/1:19,0:3:2.98:3,0,79	0/0:19,0:19:55.98:0,56,902	0/0:21,0:21:62.94:0,63,1067	0/0:28,0:28:74.71:0,75,1145	1/1:5,12:17:36.07:436,36,0	0/0:23,0:23:51.45:0,51,762	0/0:23,0:23:66.12:0,66,1143	0/0:22,0:22:54.06:0,54,911	0/0:31,0:31:83.71:0,84,1299	0/0:27,0:27:70.07:0,70,1021	0/0:25,0:25:74.52:0,75,1211	0/1:18,1:18:0:0,0,0	0/0:22,0:22:57.19:0,57,874	0/0:23,0:23:8.31:0,8,26	1/1:9,0:9:8.85:57,9,0	0/0:18,0:18:50.80:0,51,759	0/0:25,0:25:53.35:0,53,967	0/0:53,0:53:99:0,137,2203	0/0:31,0:31:53.59:0,54,1173	0/0:23,0:23:60.09:0,60,947	0/0:35,0:35:86.48:0,86,1410	1/1:18,2:20:11.01:93,11,0	0/1:18,0:18:27.54:28,0,180	0/1:25,1:25:11.45:11,0,100	0/1:7,0:7:4.05:4,0,19
chr10	2891787	.	C	CGT	692.24	PASS	AB=0.781;AC=11;AF=0.196;AN=56;BaseQRankSum=8.666;DP=660;FS=1.356;HRun=0;HaplotypeScore=122.6889;InbreedingCoeff=0.3479;MQ=56.75;MQ0=8;MQRankSum=-6.532;QD=4.07;ReadPosRankSum=-1.057;VQSLOD=2.1026;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:9,22:31:7.11:7,0,13	0/0:19,0:19:54.10:0,54,797	0/0:22,0:5:9.85:0,10,91	0/0:20,0:4:8.75:0,9,72	0/0:21,0:21:55.99:0,56,816	0/0:22,0:22:63.21:0,63,1001	0/0:28,0:28:55.74:0,56,1128	1/1:16,0:16:35.24:359,35,0	0/0:23,0:23:55.70:0,56,774	0/0:24,0:24:66.22:0,66,1045	0/0:22,0:22:54.16:0,54,846	0/0:31,0:31:84.28:0,84,1305	0/0:27,0:27:72.20:0,72,1038	0/0:25,0:25:75.25:0,75,1166	0/1:5,14:19:0.14:0,0,0	0/0:22,0:22:39.55:0,40,420	0/1:23,0:23:20.83:58,0,21	0/1:3,6:9:0.93:67,0,1	0/0:17,0:17:51.14:0,51,724	0/0:24,0:24:59.01:0,59,879	0/0:53,0:53:99:0,138,2091	0/0:32,0:32:69.31:0,69,1090	0/0:23,0:23:66.21:0,66,981	0/0:35,0:35:96.05:0,96,1433	1/1:15,5:20:11.57:146,12,0	0/1:17,0:17:22.10:22,0,260	0/1:25,2:26:20.23:136,0,20	0/1:5,2:7:46.69:47,0,64
chr10	2891794	.	G	GCA	607.05	PASS	AB=0.969;AC=9;AF=0.161;AN=56;BaseQRankSum=7.598;DP=663;FS=6.274;HRun=0;HaplotypeScore=119.4743;InbreedingCoeff=0.3461;MQ=58.08;MQ0=7;MQRankSum=-4.874;QD=4.60;ReadPosRankSum=-1.696;VQSLOD=2.2638;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:2.99:0,3,35	0/0:18,0:18:54.18:0,54,824	0/0:21,0:6:16.57:0,17,121	0/0:23,0:7:9.42:0,9,86	0/0:21,0:21:57.19:0,57,864	0/0:24,0:24:66.21:0,66,988	0/0:25,0:25:69.23:0,69,1056	0/0:20,0:20:15.03:0,15,128	0/0:22,0:22:48.15:0,48,703	0/0:27,0:27:75.11:0,75,1075	0/0:20,0:20:51.11:0,51,755	0/0:27,0:27:75.25:0,75,1143	0/0:26,0:26:69.22:0,69,1042	0/0:29,0:29:84.26:0,84,1258	0/1:19,0:18:4.97:5,0,14	0/0:21,0:21:51.16:0,51,758	1/1:25,0:25:15.11:160,15,0	0/1:13,0:13:2.92:3,0,62	0/0:16,0:16:48.16:0,48,732	0/0:22,0:22:57.18:0,57,851	0/0:49,0:49:99:0,126,1928	0/0:27,0:27:69.23:0,69,1056	0/0:22,0:22:63.21:0,63,953	0/0:37,0:37:99:0,102,1561	0/1:21,0:21:12.33:12,0,18	0/1:20,0:20:99:186,0,116	0/1:22,3:26:67.37:284,0,67	1/1:5,2:7:15.88:98,16,0
chr10	2893408	.	T	TC	1798.39	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-8.106;DP=700;FS=0.546;HRun=5;HaplotypeScore=68.9652;InbreedingCoeff=0.9700;MQ=65.03;MQ0=1;MQRankSum=0.961;QD=34.58;ReadPosRankSum=2.796;VQSLOD=3.8044;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,50:52:99:1893,144,0	0/0:5,0:5:12.03:0,12,129	0/0:20,0:18:52.34:0,52,528	0/0:35,0:35:87.16:0,87,911	0/0:18,0:17:45.07:0,45,466	0/0:23,0:23:66.15:0,66,701	0/0:28,0:28:75.19:0,75,806	0/0:25,0:25:69.13:0,69,722	0/0:20,0:20:57.14:0,57,613	0/0:24,0:24:66.16:0,66,709	0/0:16,0:16:48.11:0,48,509	0/0:23,0:23:63.16:0,63,677	0/0:28,0:28:75.19:0,75,806	0/0:32,0:32:93.22:0,93,991	0/0:33,0:33:93.23:0,93,999	0/0:23,0:23:57.14:0,57,613	0/0:23,0:23:63.16:0,63,677	0/0:30,0:30:87.15:0,87,912	0/0:19,0:19:48.11:0,48,509	0/0:23,0:23:69.16:0,69,733	0/0:40,0:40:90.20:0,90,958	0/0:21,0:21:57.13:0,57,604	0/0:20,0:20:57.14:0,57,613	0/0:26,0:26:72.10:0,72,750	0/0:31,0:31:90.20:0,90,957	0/0:29,0:29:81.20:0,81,865	0/0:22,0:22:57.14:0,57,613	0/0:11,0:11:33.08:0,33,355
chr10	2894237	.	G	GC	7727.65	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-14.843;DP=615;FS=6.708;HRun=3;HaplotypeScore=59.7061;InbreedingCoeff=0.9978;MQ=92.15;MQ0=0;MQRankSum=-6.998;QD=38.26;ReadPosRankSum=0.925;VQSLOD=5.0409;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,34:35:93.31:1302,93,0	0/0:7,0:7:18.06:0,18,216	0/0:29,0:28:42.14:0,42,713	0/0:25,0:25:21.59:0,22,517	0/0:28,0:28:84.23:0,84,980	0/0:24,0:24:69.19:0,69,816	0/0:17,0:17:51.14:0,51,601	1/1:0,31:31:90.30:1259,90,0	0/0:16,0:16:48.12:0,48,553	0/0:28,0:28:84.26:0,84,1008	0/0:12,0:12:36.10:0,36,420	0/0:16,0:16:48.15:0,48,576	0/0:18,0:18:51.16:0,51,612	0/0:21,0:21:63.18:0,63,744	1/1:1,25:26:69.23:966,69,0	0/0:22,0:22:60.17:0,60,709	1/1:0,25:25:72.24:1008,72,0	1/1:0,13:13:39.13:546,39,0	0/0:26,0:26:60.18:0,60,719	0/0:26,0:26:72.21:0,72,852	0/0:41,0:41:99:0,114,1345	0/0:21,0:21:63.18:0,63,744	0/0:22,0:22:63.19:0,63,756	0/0:14,0:14:39.12:0,39,468	1/1:1,10:11:24.08:336,24,0	1/1:1,27:28:81.27:1134,81,0	1/1:1,19:20:45.15:630,45,0	1/1:0,13:13:39.13:546,39,0
chr10	2894377	.	T	TA	1328.70	PASS	AB=0.925;AC=6;AF=0.107;AN=56;BaseQRankSum=3.273;DP=604;FS=0.000;HRun=11;HaplotypeScore=75.6696;InbreedingCoeff=0.5821;MQ=69.83;MQ0=1;MQRankSum=-0.694;QD=12.65;ReadPosRankSum=0.199;VQSLOD=3.5124;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,31:35:54.92:738,55,0	0/0:15,0:14:38.46:0,38,289	0/1:18,1:13:7.28:7,0,56	0/0:11,0:8:5.79:0,6,39	0/0:38,1:39:55.92:0,56,602	0/0:22,0:23:58.81:0,59,447	0/0:18,0:18:44.76:0,45,341	0/0:8,0:33:51.27:0,51,165	0/0:11,0:11:29.88:0,30,232	0/0:21,0:22:40.76:0,41,300	0/0:19,0:19:44.80:0,45,345	0/0:11,0:11:32.87:0,33,255	0/0:21,0:21:29.90:0,30,370	0/0:9,0:9:23.90:0,24,184	0/0:17,0:17:44.80:0,45,346	0/0:19,0:20:52.80:0,53,395	1/1:7,26:32:65.22:694,65,0	0/0:14,2:16:5.24:0,5,225	0/1:16,2:18:22.06:22,0,216	0/0:32,0:33:80.58:0,81,614	0/0:15,0:15:37.67:0,38,269	0/0:19,0:19:47.80:0,48,369	0/0:29,0:29:62.72:0,63,485	0/0:13,1:14:11.41:0,11,271	0/0:29,0:29:50.39:0,50,568	0/0:29,0:29:65.71:0,66,507	0/0:26,0:26:70.75:0,71,537	0/0:17,1:18:23.36:0,23,364
chr10	2895633	.	T	TA	265.53	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.101;DP=515;FS=1.156;HRun=0;HaplotypeScore=54.3974;InbreedingCoeff=0.9182;MQ=73.41;MQ0=1;MQRankSum=-2.288;QD=15.62;ReadPosRankSum=2.079;VQSLOD=5.1247;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,14:17:29.76:360,30,0	0/0:9,0:9:27.08:0,27,361	0/0:12,0:10:27.08:0,27,352	0/0:8,0:8:7.49:0,7,86	0/0:30,0:30:87.17:0,87,1169	0/0:26,0:26:78.26:0,78,1088	0/0:13,0:13:39.13:0,39,545	0/0:28,0:28:81.27:0,81,1132	0/0:16,0:16:48.16:0,48,669	0/0:22,0:22:66.21:0,66,907	0/0:26,0:26:75.24:0,75,1032	0/0:18,0:18:54.18:0,54,753	0/0:7,0:7:21.07:0,21,291	0/0:15,0:15:45.15:0,45,628	0/0:13,0:13:31.73:0,32,174	0/0:14,0:14:42.14:0,42,587	0/0:26,0:26:75.14:0,75,1020	0/0:12,0:12:32.25:0,32,198	0/0:21,0:21:63.20:0,63,864	0/0:33,0:33:96.29:0,96,1306	0/0:8,0:8:24.08:0,24,336	0/0:16,0:16:48.16:0,48,663	0/0:20,0:20:54.18:0,54,752	0/0:15,0:15:45.15:0,45,628	0/0:21,0:22:48.55:0,49,268	0/0:32,0:32:93.30:0,93,1285	0/0:24,0:24:72.24:0,72,1003	0/0:12,0:12:30.10:0,30,419
chr10	2897409	.	G	GT	6049.10	PASS	AB=0.818;AC=19;AF=0.339;AN=56;BaseQRankSum=-14.592;DP=652;FS=4.976;HRun=8;HaplotypeScore=60.5358;InbreedingCoeff=0.9228;MQ=76.73;MQ0=0;MQRankSum=-1.044;QD=26.53;ReadPosRankSum=-0.897;VQSLOD=5.3286;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,18:19:50.98:568,51,0	0/1:7,2:9:13.67:14,0,136	0/0:12,0:12:23.99:0,24,219	0/0:16,0:15:30.85:0,31,264	0/0:31,0:31:90.05:0,90,824	0/0:31,0:31:78.03:0,78,714	0/0:16,0:16:45.02:0,45,412	1/1:7,31:38:93.23:1042,93,0	0/0:24,0:24:66.03:0,66,604	0/0:22,0:22:54.01:0,54,494	0/0:19,0:19:54.01:0,54,489	0/0:22,0:22:63.01:0,63,572	0/0:23,0:23:66.04:0,66,604	0/0:23,0:23:63.02:0,63,572	1/1:3,25:28:64.04:715,64,0	0/0:29,0:29:84.03:0,84,764	1/1:0,18:18:48.14:554,48,0	1/1:0,11:12:32.77:379,33,0	0/0:26,0:26:66.03:0,66,603	0/0:42,0:42:99:0,108,988	0/0:27,0:27:66.03:0,66,604	0/0:19,0:19:54.03:0,54,494	0/0:22,0:22:50.99:0,51,462	0/0:20,0:20:51.02:0,51,467	1/1:1,20:21:51.15:589,51,0	1/1:5,28:33:35.33:915,35,0	1/1:6,32:40:89.93:997,90,0	1/1:2,8:10:24.07:277,24,0
chr10	2901295	.	AG	A	649.99	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=1.107;DP=521;FS=20.827;HRun=4;HaplotypeScore=60.1437;InbreedingCoeff=0.9231;MQ=56.57;MQ0=39;MQRankSum=0.443;QD=22.41;ReadPosRankSum=-2.881;VQSLOD=1.4864;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:26:72.18:0,72,964	0/0:10,0:10:27.09:0,27,377	0/0:17,0:11:17.08:0,17,358	0/0:29,0:16:39.02:0,39,488	0/0:16,0:14:27.09:0,27,371	0/0:18,0:17:45.06:0,45,563	0/0:30,0:27:75.16:0,75,1004	1/1:5,24:24:66.09:745,66,0	0/0:25,0:23:57.10:0,57,744	0/0:9,0:8:24.08:0,24,330	0/0:8,0:8:24.08:0,24,322	0/0:14,0:13:33.07:0,33,439	0/0:17,0:15:42.14:0,42,581	0/0:26,0:25:75.21:0,75,1018	0/0:17,0:17:48.12:0,48,643	0/0:17,0:14:36.03:0,36,454	0/0:25,0:24:63.20:0,63,857	0/0:15,0:14:33.11:0,33,462	0/0:17,0:16:45.15:0,45,630	0/0:13,0:13:24.08:0,24,329	0/0:48,0:45:99:0,108,1464	0/0:6,0:5:9.03:0,9,126	0/0:10,0:10:21.07:0,21,293	0/0:26,0:25:69.16:0,69,923	0/0:11,0:11:27.05:0,27,347	0/0:13,0:12:30.10:0,30,411	0/0:15,0:14:30.10:0,30,413	0/0:11,0:11:33.11:0,33,462
chr10	2908221	.	AAT	A	1120.79	PASS	AB=0.827;AC=7;AF=0.140;AN=50;BaseQRankSum=2.915;DP=242;FS=8.783;HRun=0;HaplotypeScore=53.1914;InbreedingCoeff=0.4425;MQ=65.04;MQ0=5;MQRankSum=-1.498;QD=21.15;ReadPosRankSum=0.119;VQSLOD=2.6142;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:9,1:9:3.51:4,0,73	0/0:2,0:2:6.02:0,6,111	0/0:22,0:9:16.96:0,17,256	0/0:21,0:13:11.15:0,11,228	0/0:16,0:16:48.10:0,48,798	0/0:10,0:10:30.10:0,30,551	0/0:1,0:1:3.01:0,3,55	0/0:22,0:19:48.06:0,48,427	0/0:3,0:3:9.01:0,9,130	0/0:14,0:13:39.13:0,39,683	0/0:10,0:10:30.03:0,30,403	0/0:5,0:5:15.02:0,15,213	0/0:4,0:4:12.02:0,12,191	0/0:4,0:4:12.03:0,12,191	./.	0/0:6,0:6:18.05:0,18,304	0/0:15,0:15:42.94:0,43,651	0/0:7,0:7:9.68:0,10,39	0/0:10,0:10:29.98:0,30,485	0/0:7,0:7:21.06:0,21,340	0/0:4,0:4:9:0,9,134	./.	0/0:3,0:3:9.03:0,9,162	./.	0/1:10,0:10:19.13:19,0,20	0/1:4,12:16:7.76:530,0,8	1/1:1,9:10:30.09:402,30,0	1/1:0,7:7:21.07:299,21,0
chr10	2908264	.	G	GAA	2271.46	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=5.681;DP=334;FS=8.378;HRun=9;HaplotypeScore=51.0700;InbreedingCoeff=0.9375;MQ=62.76;MQ0=1;MQRankSum=-2.149;QD=21.84;ReadPosRankSum=1.494;VQSLOD=1.7795;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,0:9:14.97:51,15,0	0/0:5,0:5:15.04:0,15,159	0/0:19,0:11:16.04:0,16,204	0/0:11,0:10:17.38:0,17,162	0/0:12,0:12:36.05:0,36,365	0/0:7,0:7:11.99:0,12,128	0/0:4,0:4:11.99:0,12,115	0/0:22,0:20:48.08:0,48,494	0/0:10,0:10:30.08:0,30,319	0/0:15,0:15:33.06:0,33,351	0/0:19,0:19:54.09:0,54,563	0/0:10,0:10:30.08:0,30,319	0/0:7,0:6:17.99:0,18,167	0/0:9,0:9:24.05:0,24,255	1/1:0,6:6:9.03:139,9,0	0/0:9,0:9:24.04:0,24,248	1/1:2,0:20:45.40:167,45,0	1/1:0,10:10:18.02:251,18,0	0/0:21,0:20:54.13:0,54,575	0/0:19,0:19:54.13:0,54,574	0/0:14,0:14:11.88:0,12,316	0/0:4,0:4:12.03:0,12,127	0/0:10,0:10:30.02:0,30,305	0/0:2,0:3:8.76:0,9,76	1/1:0,14:14:27.09:415,27,0	1/1:10,9:19:10.12:479,10,0	1/1:4,13:18:52.36:739,52,0	1/1:3,4:7:18.03:233,18,0
chr10	2910789	.	G	GA	603.09	PASS	AB=0.909;AC=3;AF=0.054;AN=56;BaseQRankSum=5.733;DP=629;FS=5.145;HRun=8;HaplotypeScore=68.4386;InbreedingCoeff=0.6834;MQ=83.30;MQ0=0;MQRankSum=0.351;QD=16.75;ReadPosRankSum=-4.435;VQSLOD=2.7947;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:59:99:0,143,1289	0/1:9,1:10:7.60:8,0,193	0/0:21,0:21:45.59:0,46,434	0/0:16,0:16:38.89:0,39,345	0/0:27,0:28:70.12:0,70,620	0/0:26,0:26:69.04:0,69,631	0/0:19,0:19:54.01:0,54,489	1/1:6,19:26:68.31:696,68,0	0/0:15,0:15:36:0,36,324	0/0:26,0:26:72.03:0,72,659	0/0:22,0:22:60.03:0,60,549	0/0:12,0:12:27:0,27,243	0/0:35,0:35:99:0,105,952	0/0:21,0:21:51.01:0,51,462	0/0:15,0:15:36.01:0,36,330	0/0:17,0:17:48.01:0,48,435	0/0:22,0:22:57:0,57,516	0/0:11,0:11:23.97:0,24,211	0/0:18,0:18:42.01:0,42,384	0/0:36,0:36:92.42:0,92,831	0/0:20,0:20:60.03:0,60,549	0/0:20,0:20:45.01:0,45,412	0/0:23,0:24:62.05:0,62,550	0/0:29,0:29:78.02:0,78,707	0/0:16,0:16:38.88:0,39,345	0/0:23,0:23:69.04:0,69,631	0/0:28,0:28:75.01:0,75,681	0/0:14,0:14:42.02:0,42,384
chr10	2911231	.	T	TA	2095.02	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-9.684;DP=601;FS=1.035;HRun=6;HaplotypeScore=63.1433;InbreedingCoeff=0.9860;MQ=72.51;MQ0=0;MQRankSum=-2.088;QD=31.27;ReadPosRankSum=-1.255;VQSLOD=3.7368;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:57.10:0,57,568	0/0:9,0:9:27.06:0,27,275	0/0:9,0:9:11.17:0,11,136	0/0:17,0:17:32.47:0,32,346	0/0:36,0:36:99:0,102,1040	0/0:19,0:19:57.05:0,57,567	0/0:10,0:10:30.07:0,30,306	0/0:29,0:29:75.14:0,75,746	0/0:31,0:31:87.20:0,87,887	0/0:36,0:36:99:0,99,996	0/0:24,0:24:63.12:0,63,635	0/0:19,0:19:54.10:0,54,539	0/0:22,0:22:63.13:0,63,636	0/0:39,0:39:99:0,108,1094	0/0:29,0:29:87.19:0,87,882	0/0:23,0:23:63.09:0,63,617	0/0:16,0:16:45.08:0,45,451	0/0:12,0:12:36.08:0,36,367	0/0:14,0:14:39.02:0,39,374	0/0:25,0:25:69.14:0,69,697	0/0:11,0:11:30.05:0,30,298	0/0:24,0:24:69.13:0,69,691	0/0:26,0:26:78.18:0,78,795	0/0:13,0:13:39.08:0,39,392	0/0:22,0:22:60.13:0,60,606	1/1:0,28:28:81.23:993,81,0	1/1:2,22:24:54.17:679,54,0	1/1:0,15:15:45.14:566,45,0
chr10	2911606	.	ATATATAT	A	522.66	PASS	AB=0.944;AC=14;AF=0.259;AN=54;BaseQRankSum=3.710;DP=120;FS=8.812;HRun=0;HaplotypeScore=36.2902;InbreedingCoeff=0.4079;MQ=78.68;MQ0=11;MQRankSum=-1.490;QD=9.01;ReadPosRankSum=0.564;VQSLOD=-0.0636;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:10,0:10:2.90:3,0,44	0/0:2,0:2:5.75:0,6,30	0/0:7,0:5:10.69:0,11,75	0/0:5,0:2:5.99:0,6,49	0/0:6,0:6:17.25:0,17,89	0/0:2,0:1:2.88:0,3,15	0/0:2,0:2:5.75:0,6,29	0/0:6,0:4:2.71:0,3,7	0/0:1,0:1:2.99:0,3,24	0/0:4,0:4:11.97:0,12,98	0/0:2,0:2:5.99:0,6,49	0/0:3,0:3:8.63:0,9,44	0/0:5,0:5:14.65:0,15,206	0/0:2,0:2:5.75:0,6,29	1/1:2,0:2:1.77:3,2,0	0/0:2,0:2:5.99:0,6,49	1/1:13,0:10:4.69:81,5,0	0/1:7,0:7:28.61:29,0,56	0/0:4,0:4:5.80:0,6,41	0/0:2,0:2:5.75:0,6,29	0/0:4,0:4:8.63:0,9,45	0/0:2,0:2:5.75:0,6,29	1/1:4,0:4:0.89:3,1,0	0/0:1,0:1:2.50:0,2,9	./.	1/1:4,0:5:4.25:52,4,0	1/1:2,0:4:9.89:82,10,0	1/1:2,6:9:18.06:409,18,0
chr10	2911643	.	TAGAGAGAG	T	222.95	PASS	AB=0.972;AC=5;AF=0.119;AN=42;BaseQRankSum=0.155;DP=124;FS=0.000;HRun=0;HaplotypeScore=42.4084;InbreedingCoeff=0.3207;MQ=71.05;MQ0=9;MQRankSum=-2.818;QD=9.69;ReadPosRankSum=2.157;VQSLOD=1.2884;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:2,0:2:1.25:0,1,3	0/0:3,0:3:9.03:0,9,300	0/0:9,0:3:0.05:0,0,1	0/0:15,0:7:11.39:0,11,133	0/0:4,0:4:12.04:0,12,395	0/0:3,0:3:6.49:0,6,198	0/1:1,0:1:0:0,0,0	1/1:4,4:6:12.04:292,12,0	0/0:3,0:3:4.66:0,5,13	./.	./.	0/0:3,0:3:6.02:0,6,102	0/0:2,0:2:3.01:0,3,65	0/0:1,0:1:0:0,0,0	./.	./.	0/1:10,0:9:22.07:22,0,52	0/0:11,0:10:18.06:0,18,531	0/0:4,0:3:8.96:0,9,164	0/0:2,0:2:3.01:0,3,100	./.	./.	0/1:3,0:3:0:0,0,0	./.	0/0:4,0:4:3.01:0,3,101	0/0:5,0:5:6.51:0,7,113	0/0:1,0:1:3.01:0,3,96	0/0:17,0:16:38.50:0,39,920
chr10	2912380	.	CGTGT	C	615.36	PASS	AB=0.985;AC=9;AF=0.161;AN=56;BaseQRankSum=-0.032;DP=603;FS=2.578;HRun=0;HaplotypeScore=155.4103;InbreedingCoeff=0.2370;MQ=63.82;MQ0=17;MQRankSum=-3.554;QD=4.33;ReadPosRankSum=-0.162;VQSLOD=2.3369;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:14:4.19:0,4,21	0/0:9,0:9:13.85:0,14,189	0/0:26,0:20:19.83:0,20,217	0/0:29,0:22:10.84:0,11,122	0/0:23,0:24:29.23:0,29,531	0/0:21,0:20:26.12:0,26,500	0/0:20,0:20:14.09:0,14,414	0/1:20,0:20:22.36:32,0,22	0/0:24,0:21:33.07:0,33,589	0/1:44,0:43:6.74:7,0,1242	0/0:15,0:15:27.09:0,27,500	0/0:23,0:19:21.03:0,21,361	0/0:12,0:11:24.05:0,24,491	0/0:20,0:19:15.05:0,15,337	0/1:18,0:16:8.46:8,0,52	0/0:15,0:13:24.06:0,24,428	0/1:17,0:16:4.52:5,0,89	0/0:17,0:15:18.82:0,19,114	0/0:18,0:15:9.49:0,9,150	0/0:17,0:17:28.62:0,29,394	0/0:69,0:60:62.39:0,62,1384	0/0:23,0:22:17.74:0,18,313	0/0:12,0:12:6.02:0,6,148	0/0:27,0:24:35.33:0,35,696	0/0:23,0:23:8.61:0,9,69	0/1:22,2:24:16.52:407,0,17	1/1:5,5:10:2.89:48,3,0	1/1:8,1:8:11:240,11,0
chr10	2912402	.	TGC	T	522.22	PASS	AB=0.991;AC=18;AF=0.321;AN=56;BaseQRankSum=1.232;DP=568;FS=6.277;HRun=0;HaplotypeScore=134.3566;InbreedingCoeff=0.3904;MQ=38.62;MQ0=31;MQRankSum=-4.519;QD=2.90;ReadPosRankSum=-2.512;VQSLOD=1.4742;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:2,10:11:2.99:25,3,0	0/0:17,0:17:0.59:0,1,147	0/1:12,0:5:15.23:39,0,15	0/1:12,0:5:5.09:5,0,18	0/0:22,0:21:7.13:0,7,344	0/0:24,0:21:12.22:0,12,327	0/0:20,0:19:15.51:0,16,256	1/1:11,3:11:7.06:108,7,0	0/0:22,0:19:26.92:0,27,362	0/0:42,0:38:12.39:0,12,731	0/0:16,0:15:20.95:0,21,283	0/0:16,0:12:14.99:0,15,184	0/0:14,0:13:26.83:0,27,335	0/0:19,0:18:17.04:0,17,234	0/1:20,0:15:3.90:25,0,4	0/0:17,0:13:22.98:0,23,253	1/1:11,0:10:10.91:75,11,0	1/1:14,0:11:6.92:59,7,0	0/0:22,0:14:1.88:0,2,146	0/0:13,0:13:2.51:0,3,161	0/0:83,0:68:63.31:0,63,898	0/1:23,0:22:4.51:5,0,137	0/0:15,0:15:15.38:0,15,162	0/0:26,0:22:19.05:0,19,442	0/1:17,1:17:3.25:13,0,3	0/1:28,0:27:46.16:224,0,46	1/1:6,0:6:2.60:10,3,0	1/1:10,0:9:16.37:101,16,0
chr10	2912422	.	TGCGTG	T	83.50	PASS	AB=0.972;AC=8;AF=0.154;AN=52;BaseQRankSum=-0.297;DP=387;FS=2.853;HRun=0;HaplotypeScore=113.0223;InbreedingCoeff=0.0977;MQ=36.01;MQ0=27;MQRankSum=-5.104;QD=1.52;ReadPosRankSum=-3.021;VQSLOD=1.7406;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:6:3.01:0,3,40	0/1:12,0:12:11.55:12,0,40	./.	./.	0/0:15,0:14:15.04:0,15,241	0/0:17,0:16:15.04:0,15,276	0/0:16,0:14:5.91:0,6,122	0/1:7,0:5:26.75:37,0,27	0/0:15,0:11:14.92:0,15,224	0/0:26,0:25:9.68:0,10,358	0/0:14,0:13:12.03:0,12,216	0/0:11,0:7:4.78:0,5,101	0/0:12,0:11:20.81:0,21,253	0/0:13,0:12:15.05:0,15,212	0/0:5,8:10:3.01:0,3,34	0/0:12,0:8:11.23:0,11,147	0/0:9,0:8:0.53:0,1,3	0/1:7,1:5:10.36:10,0,23	0/0:11,0:6:9.80:0,10,151	0/0:9,0:9:6.02:0,6,106	0/0:68,0:56:44.97:0,45,696	0/0:18,0:17:5.93:0,6,38	0/0:17,0:16:14.99:0,15,252	0/0:20,0:17:20.34:0,20,324	1/1:11,0:10:0.89:2,1,0	0/1:15,0:14:15.91:114,0,16	0/0:4,0:4:2.90:0,3,16	1/1:2,0:2:2.97:20,3,0
chr10	2912442	.	GCA	G	61.90	PASS	AB=0.924;AC=9;AF=0.205;AN=44;BaseQRankSum=0.044;DP=266;FS=6.686;HRun=0;HaplotypeScore=77.4871;InbreedingCoeff=0.2927;MQ=35.47;MQ0=13;MQRankSum=-4.304;QD=1.51;ReadPosRankSum=-1.998;VQSLOD=0.3087;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/1:9,0:9:32.23:32,0,55	./.	./.	0/0:8,0:7:7.56:0,8,89	0/0:17,0:16:12.04:0,12,243	0/0:17,0:13:6.02:0,6,110	1/1:4,1:3:5.69:47,6,0	0/0:11,0:9:15.04:0,15,266	0/1:14,1:15:2.05:2,0,552	0/0:9,0:9:9.49:0,9,138	0/0:11,0:8:9.02:0,9,157	0/0:12,0:10:13.67:0,14,223	0/0:8,0:7:6.02:0,6,121	0/0:8,0:7:0:0,0,0	0/0:9,0:7:9.03:0,9,155	1/1:1,0:1:1.25:3,1,0	1/1:6,0:4:5.03:28,5,0	0/0:8,0:5:6.71:0,7,122	0/0:10,0:10:9.03:0,9,161	0/0:52,0:44:28.91:0,29,530	0/0:12,0:12:6.02:0,6,121	0/0:11,1:11:8.99:0,9,183	0/0:14,0:11:6.80:0,7,101	./.	0/1:4,1:5:60.26:62,0,60	./.	./.
chr10	2912591	.	TGTGTGC	T	46.90	PASS	AB=1.000;AC=8;AF=0.160;AN=50;BaseQRankSum=2.929;DP=512;FS=18.355;HRun=0;HaplotypeScore=68.3616;InbreedingCoeff=0.1915;MQ=27.24;MQ0=89;MQRankSum=-4.835;QD=0.50;ReadPosRankSum=-1.612;VQSLOD=-0.3331;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:10:0:0,0,0	1/1:8,0:8:1.72:4,2,0	./.	./.	0/0:11,0:10:3.01:0,3,30	0/0:11,0:9:6.02:0,6,153	0/0:48,0:30:26.61:0,27,754	0/0:11,0:2:2.04:0,2,6	0/0:16,0:12:0.99:0,1,91	0/1:29,0:21:13.44:13,0,425	0/0:9,0:8:3.01:0,3,60	0/0:22,0:15:8.85:0,9,246	0/0:14,0:9:10.37:0,10,147	0/0:17,0:13:3.01:0,3,105	0/0:6,0:5:2.98:0,3,22	0/0:10,0:5:8.90:0,9,183	1/1:7,4:8:10.67:78,11,0	0/1:25,0:18:39.36:39,0,72	0/0:20,0:6:8.06:0,8,131	0/0:2,0:1:0:0,0,0	0/0:120,0:52:24.92:0,25,479	0/0:8,0:6:3:0,3,25	0/0:11,0:10:9.03:0,9,148	0/0:37,0:27:27.81:0,28,703	./.	0/1:15,0:10:13.58:14,0,50	0/0:2,0:2:0:0,0,0	0/1:6,0:5:1.70:12,0,2
chr10	2912609	.	TGC	T	325.52	PASS	AB=0.964;AC=14;AF=0.280;AN=50;BaseQRankSum=3.504;DP=650;FS=9.510;HRun=0;HaplotypeScore=75.1037;InbreedingCoeff=0.0828;MQ=28.31;MQ0=96;MQRankSum=-6.136;QD=1.89;ReadPosRankSum=-2.658;VQSLOD=-0.0620;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,2:16:0:0,0,0	0/1:10,1:9:0.46:0,0,20	./.	./.	0/0:16,0:16:11.51:0,12,116	0/0:18,0:13:11.72:0,12,197	0/0:58,2:39:32.02:0,32,500	0/1:17,0:8:36.70:37,0,43	0/0:20,1:14:2.04:0,2,55	0/1:38,0:27:30.01:30,0,386	0/0:10,1:10:3.01:0,3,57	0/0:30,0:21:11.88:0,12,198	0/0:17,0:13:14.42:0,14,156	0/0:22,1:19:6.01:0,6,83	0/0:12,2:10:2.68:0,3,11	0/0:16,0:8:0.69:0,1,68	1/1:13,0:9:14.77:118,15,0	0/1:20,7:20:52.60:172,0,53	0/1:14,0:3:10.95:11,0,92	0/1:2,0:1:0:0,0,0	0/0:127,1:61:25.63:0,26,579	0/1:16,0:11:11.97:12,0,52	0/0:13,0:12:8.85:0,9,92	0/0:48,2:36:34.09:0,34,491	./.	0/1:18,0:13:44.28:44,0,63	1/1:8,0:8:1.93:6,2,0	1/1:8,0:7:2.71:27,3,0
chr10	2912611	.	CGT	C	103.57	PASS	AB=0.935;AC=8;AF=0.160;AN=50;BaseQRankSum=2.771;DP=655;FS=16.938;HRun=0;HaplotypeScore=77.2905;InbreedingCoeff=0.0447;MQ=28.54;MQ0=92;MQRankSum=-4.710;QD=0.84;ReadPosRankSum=-1.955;VQSLOD=0.1344;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:24,5:17:0.01:0,0,0	0/0:11,0:9:1.93:0,2,46	./.	./.	0/0:15,0:16:12.04:0,12,184	0/0:18,0:13:9.03:0,9,156	0/0:62,0:40:30.07:0,30,450	0/1:13,3:7:33.16:91,0,33	0/0:20,0:13:2.96:0,3,42	0/0:39,0:26:36.68:0,37,583	0/0:10,1:10:3.01:0,3,52	0/0:29,1:21:11.89:0,12,203	0/0:16,0:13:14.76:0,15,141	0/0:24,0:19:6.02:0,6,94	0/0:14,0:10:2.37:0,2,8	0/1:16,0:7:19.56:20,0,31	1/1:13,0:9:1.46:23,1,0	0/1:26,1:21:60.49:60,0,84	0/0:13,0:5:11.85:0,12,130	0/1:3,0:2:0:0,0,0	0/0:129,0:62:49.60:0,50,762	0/0:15,0:11:5.05:0,5,58	0/0:14,0:12:6.02:0,6,83	0/0:50,0:36:31.13:0,31,474	./.	0/1:16,1:13:18.45:18,0,89	0/0:5,3:8:2.35:0,2,13	0/0:7,0:7:3:0,3,27
chr10	2912615	.	TGTGTGC	T	119.97	PASS	AB=0.982;AC=6;AF=0.125;AN=48;BaseQRankSum=2.632;DP=669;FS=7.454;HRun=0;HaplotypeScore=85.8916;InbreedingCoeff=0.1193;MQ=28.32;MQ0=95;MQRankSum=-5.036;QD=1.07;ReadPosRankSum=-0.537;VQSLOD=0.3920;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:18:0.21:0,0,0	0/1:11,0:9:0.47:0,0,69	./.	./.	0/0:18,0:18:12.01:0,12,294	0/0:17,1:12:9.50:0,10,294	0/0:61,0:39:29.61:0,30,637	0/0:18,0:10:12.10:0,12,168	0/0:18,4:15:5.78:0,6,70	0/1:37,1:27:34.44:34,0,611	0/0:11,0:10:3.01:0,3,102	0/0:29,1:21:11.86:0,12,335	0/0:14,0:12:3.77:0,4,179	0/0:22,1:18:5.82:0,6,176	0/0:16,0:12:3:0,3,27	0/0:15,0:7:5.05:0,5,44	1/1:13,0:9:8.91:54,9,0	0/0:27,0:21:4.30:0,4,139	0/0:13,0:5:9.09:0,9,211	./.	0/0:142,0:67:58.57:0,59,1444	0/0:15,1:12:5.51:0,6,114	0/0:10,2:10:6.02:0,6,157	0/0:48,1:33:35.60:0,36,829	./.	0/1:19,1:14:79.10:133,0,79	0/0:8,0:8:2.35:0,2,13	0/0:8,0:7:3.45:0,3,26
chr10	2912619	.	TGC	T	196.91	PASS	AB=0.975;AC=12;AF=0.240;AN=50;BaseQRankSum=5.421;DP=671;FS=5.198;HRun=0;HaplotypeScore=77.3244;InbreedingCoeff=-0.0315;MQ=28.65;MQ0=87;MQRankSum=-5.462;QD=1.00;ReadPosRankSum=-1.980;VQSLOD=0.9335;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:26,3:18:0.13:0,0,0	0/1:11,1:10:6.53:7,0,50	./.	./.	0/0:18,0:18:12:0,12,193	0/0:18,0:12:8.73:0,9,173	0/0:61,1:39:29.40:0,29,441	0/1:17,0:10:30.67:31,0,93	0/0:21,1:15:5.54:0,6,70	0/1:35,1:25:62.51:63,0,445	0/0:10,1:10:3.01:0,3,57	0/0:32,0:22:11.89:0,12,231	0/0:15,0:13:12.28:0,12,99	0/0:19,2:16:6.02:0,6,110	0/0:16,0:12:2.49:0,2,12	0/1:15,1:8:35.53:36,0,36	1/1:12,0:9:12.41:64,12,0	0/1:27,0:22:50.89:51,0,86	0/1:14,0:6:4.25:4,0,126	0/1:3,0:2:0:0,0,0	0/0:141,0:68:61.32:0,61,954	0/0:16,0:12:5.51:0,6,67	0/0:11,0:9:5.61:0,6,67	0/0:51,2:36:41.51:0,42,594	./.	0/1:22,0:15:43.50:59,0,43	0/0:8,0:8:2.18:0,2,23	0/1:7,0:6:9.05:13,0,9
chr10	2912637	.	C	CGT	47.26	PASS	AB=0.956;AC=7;AF=0.140;AN=50;BaseQRankSum=3.273;DP=682;FS=3.222;HRun=0;HaplotypeScore=78.8854;InbreedingCoeff=0.0894;MQ=29.62;MQ0=89;MQRankSum=-3.573;QD=0.46;ReadPosRankSum=-0.730;VQSLOD=1.3986;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:25,1:18:0:0,0,0	0/0:10,0:6:2.98:0,3,39	./.	./.	0/0:17,0:14:12.04:0,12,154	0/0:21,0:14:14.90:0,15,179	0/0:55,0:30:20.92:0,21,230	0/0:13,0:10:8.40:0,8,64	0/0:18,2:11:6.02:0,6,78	0/0:35,0:20:41.39:0,41,393	0/0:12,0:11:6.02:0,6,78	0/0:30,0:21:8.90:0,9,102	0/0:15,0:11:2.99:0,3,160	0/0:19,0:14:5.67:0,6,78	0/0:19,0:13:2.23:0,2,38	0/0:17,1:10:9.03:0,9,117	0/0:14,0:11:11.13:0,11,89	0/1:24,1:21:61.57:62,0,87	0/0:24,0:12:27.08:0,27,331	0/1:7,0:5:0:0,0,0	0/0:144,0:75:93.16:0,93,1199	0/0:18,0:12:6.02:0,6,78	0/0:12,0:10:9.03:0,9,116	0/0:55,0:38:42.04:0,42,546	./.	0/1:27,1:17:34.39:34,0,115	1/1:4,2:6:0.46:1,0,0	0/1:6,1:6:18.71:46,0,19
chr10	2912655	.	CGT	C	34.84	PASS	AB=0.920;AC=5;AF=0.100;AN=50;BaseQRankSum=3.654;DP=647;FS=10.529;HRun=0;HaplotypeScore=77.2468;InbreedingCoeff=0.0728;MQ=31.66;MQ0=87;MQRankSum=-3.488;QD=0.44;ReadPosRankSum=-3.097;VQSLOD=-0.2307;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,4:19:0:0,0,1	0/0:10,0:7:3.01:0,3,50	./.	./.	0/0:17,0:14:12.03:0,12,172	0/0:18,1:13:13.28:0,13,198	0/0:44,0:28:27.04:0,27,409	0/0:16,0:9:3:0,3,25	0/0:17,0:7:6.02:0,6,100	0/0:40,0:25:25.22:0,25,386	0/0:13,0:12:6.02:0,6,97	0/0:30,0:19:9.03:0,9,150	0/0:16,0:12:16.30:0,16,242	0/0:16,0:11:6.02:0,6,101	0/1:16,1:12:19.24:32,0,19	0/0:17,0:11:9.03:0,9,151	1/1:12,0:10:2.65:20,3,0	0/1:20,2:16:50.65:51,0,69	0/0:20,0:11:15.03:0,15,198	0/0:7,1:7:5.97:0,6,46	0/0:135,1:77:99:0,108,1677	0/0:18,0:11:6.02:0,6,100	0/0:11,0:10:12.04:0,12,188	0/0:55,0:39:56.86:0,57,898	./.	0/1:25,2:19:37.98:38,0,144	0/0:6,0:6:4.62:0,5,20	0/0:7,1:6:0.73:0,1,36
chr10	2912675	.	TGC	T	67.38	PASS	AB=0.995;AC=7;AF=0.135;AN=52;BaseQRankSum=5.084;DP=564;FS=32.093;HRun=0;HaplotypeScore=71.0220;InbreedingCoeff=0.0053;MQ=35.80;MQ0=76;MQRankSum=-4.604;QD=0.64;ReadPosRankSum=-2.593;VQSLOD=-0.5937;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:15:2.87:0,3,53	0/0:8,0:7:8.51:0,9,163	./.	./.	0/0:12,2:11:9.50:0,10,160	0/0:16,2:14:16.72:0,17,333	0/0:40,0:29:45.10:0,45,699	0/0:11,0:6:11.87:0,12,158	0/0:14,0:8:18.06:0,18,336	0/1:38,1:26:69.55:70,0,366	0/0:9,1:9:6.02:0,6,116	0/0:20,1:13:12.91:0,13,221	0/0:17,0:11:6.03:0,6,195	0/0:15,0:10:9.02:0,9,140	0/0:16,0:11:12.04:0,12,210	0/0:12,0:10:9.03:0,9,174	1/1:11,0:8:3.38:20,3,0	0/0:14,0:10:11.92:0,12,134	0/0:11,0:5:14.76:0,15,168	0/0:8,0:7:11.91:0,12,197	0/0:131,1:78:99:0,129,1930	0/1:16,0:12:65.12:65,0,88	0/1:9,0:9:12.92:13,0,161	0/0:45,0:39:49.94:0,50,1119	0/0:22,0:18:3.01:0,3,58	0/1:22,0:18:10.22:10,0,201	0/0:6,0:6:14.25:0,14,141	0/1:9,0:5:7.36:7,0,60
chr10	2912691	.	T	TGC	667.65	PASS	AB=0.990;AC=14;AF=0.269;AN=52;BaseQRankSum=4.712;DP=596;FS=25.731;HRun=0;HaplotypeScore=84.6941;InbreedingCoeff=0.4855;MQ=38.94;MQ0=77;MQRankSum=-2.237;QD=4.34;ReadPosRankSum=-1.055;VQSLOD=0.1275;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:26,1:20:13.65:96,14,0	0/0:12,0:11:16.56:0,17,200	./.	./.	0/0:14,0:13:18:0,18,197	0/0:20,0:15:25.99:0,26,345	0/0:43,0:32:53.44:0,53,725	1/1:15,0:8:14.98:157,15,0	0/0:18,0:12:30.07:0,30,412	0/0:47,0:35:86.48:0,86,1126	0/0:7,0:7:9.01:0,9,115	0/0:22,0:14:16.84:0,17,270	0/0:16,0:10:22.20:0,22,240	0/0:13,0:8:8.79:0,9,137	1/1:8,7:12:12.04:232,12,0	0/0:11,0:9:12.04:0,12,182	0/1:12,0:8:9.22:9,0,23	1/1:17,4:15:1.67:219,2,0	0/0:12,0:5:14.91:0,15,179	0/0:10,0:8:15.92:0,16,210	0/0:120,1:70:99:0,123,1708	0/0:15,0:13:11.98:0,12,138	0/0:8,0:8:12.01:0,12,158	0/0:49,0:45:84.12:0,84,1183	0/1:22,1:20:19.29:19,0,21	0/1:24,0:20:27.13:27,0,131	0/1:6,0:6:10.67:11,0,43	1/1:10,1:7:3.85:60,4,0
chr10	2912693	.	TGTGTGC	T	1102.86	PASS	AB=0.987;AC=15;AF=0.288;AN=52;BaseQRankSum=5.655;DP=605;FS=24.561;HRun=0;HaplotypeScore=103.3412;InbreedingCoeff=0.6412;MQ=39.62;MQ0=71;MQRankSum=-1.944;QD=6.89;ReadPosRankSum=-1.741;VQSLOD=0.3905;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:21,7:21:15.30:243,15,0	0/0:12,0:11:16.35:0,16,315	./.	./.	0/0:15,0:13:15.04:0,15,277	0/0:19,0:13:23.66:0,24,634	0/0:43,0:33:66.55:0,67,1358	1/1:7,9:9:27.01:352,27,0	0/0:19,0:13:28.91:0,29,651	0/0:43,0:34:62.31:0,62,1409	0/0:6,0:6:8.96:0,9,226	0/0:25,0:17:27.52:0,28,455	0/0:16,0:11:21.56:0,22,368	0/0:14,0:9:12.25:0,12,260	1/1:16,0:13:11.08:150,11,0	0/0:11,0:9:12.03:0,12,271	1/1:13,0:9:5.68:61,6,0	1/1:20,1:15:23.97:284,24,0	0/0:13,0:5:13.28:0,13,293	0/0:10,0:8:16.35:0,16,410	0/0:121,0:72:99:0,126,2779	0/0:16,0:14:12.04:0,12,211	0/0:9,0:9:15.04:0,15,385	0/0:49,0:47:96.73:0,97,2199	0/1:23,1:21:31.32:44,0,31	0/1:24,0:20:56.19:66,0,56	0/1:7,0:7:7.83:34,0,8	1/1:11,0:7:5.75:47,6,0
chr10	2912695	.	TGTGC	T	1014.47	PASS	AB=0.887;AC=15;AF=0.288;AN=52;BaseQRankSum=5.586;DP=600;FS=16.583;HRun=0;HaplotypeScore=92.0256;InbreedingCoeff=0.4054;MQ=39.98;MQ0=67;MQRankSum=-4.010;QD=5.90;ReadPosRankSum=-4.054;VQSLOD=-0.3853;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:22:11.11:143,11,0	0/1:13,0:12:15.65:16,0,258	./.	./.	0/0:14,0:12:14.78:0,15,230	0/0:19,0:13:23.75:0,24,559	0/0:43,0:33:65.75:0,66,1322	1/1:16,0:9:25.02:168,25,0	0/0:19,0:13:28.90:0,29,609	0/0:43,0:35:80.99:0,81,1463	0/0:6,0:6:7.27:0,7,161	0/0:24,0:17:27.52:0,28,453	0/1:16,0:11:4.48:4,0,298	0/0:14,0:9:11.78:0,12,253	0/0:16,0:13:2.33:0,2,18	0/0:11,0:9:12.04:0,12,249	1/1:7,6:9:10.52:109,11,0	1/1:22,0:16:4.25:88,4,0	0/0:13,0:5:12.51:0,13,273	0/0:10,0:8:16.35:0,16,335	0/0:117,1:72:99:0,129,2754	0/0:17,0:15:13.84:0,14,215	0/0:9,0:9:15.04:0,15,315	0/0:48,0:46:96.51:0,97,1987	0/1:22,0:20:22.43:41,0,22	0/1:18,6:20:85.05:422,0,85	0/1:3,4:7:12.18:178,0,12	1/1:5,5:7:2.01:6,2,0
chr10	2913871	.	GACAGCACC	G	5979.94	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=13.468;DP=658;FS=0.000;HRun=0;HaplotypeScore=170.6524;InbreedingCoeff=0.9916;MQ=84.21;MQ0=0;MQRankSum=-13.823;QD=59.21;ReadPosRankSum=1.076;VQSLOD=4.1974;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,24:27:63.22:1633,63,0	0/0:11,0:11:33.10:0,33,1263	0/0:18,0:18:51.18:0,51,1963	0/0:25,0:25:69.24:0,69,2551	0/0:29,0:29:81.26:0,81,3306	0/0:23,0:22:66.23:0,66,2904	0/0:20,0:20:57.20:0,57,2358	0/0:31,0:31:81.28:0,81,3164	0/0:27,0:27:75.23:0,75,3166	0/0:27,0:26:78.27:0,78,3270	0/0:25,0:25:66.22:0,66,2716	0/0:21,0:21:60.21:0,60,2490	0/0:25,0:25:75.26:0,75,3204	0/0:23,0:23:69.24:0,69,2752	1/1:4,30:34:78.27:2085,78,0	0/0:26,0:26:75.26:0,75,3192	1/1:3,14:17:27.09:753,27,0	1/1:2,8:10:21.07:586,21,0	0/0:18,0:18:42.14:0,42,1849	0/0:27,0:27:75.24:0,75,3036	0/0:28,0:28:78.27:0,78,3215	0/0:28,0:28:81.28:0,81,3337	0/0:29,0:29:84.29:0,84,3609	0/0:29,0:29:81.28:0,81,3485	1/1:0,13:13:33.11:923,33,0	0/0:26,0:26:75.26:0,75,3094	0/0:36,0:36:99:0,102,4204	0/0:5,0:5:12.04:0,12,491
chr10	2915081	.	GT	G	2407.08	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=12.152;DP=601;FS=1.917;HRun=8;HaplotypeScore=70.1743;InbreedingCoeff=0.9921;MQ=78.69;MQ0=0;MQRankSum=-4.187;QD=24.07;ReadPosRankSum=1.239;VQSLOD=4.4989;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,21:23:60.10:579,60,0	0/0:13,0:13:33.09:0,33,387	0/0:18,0:18:39.11:0,39,464	0/0:11,0:11:25.62:0,26,277	0/0:33,0:33:84.24:0,84,991	0/0:24,0:24:66.20:0,66,797	0/0:12,0:12:33.09:0,33,387	0/0:31,0:32:93.14:0,93,1090	0/0:21,0:21:57.17:0,57,688	0/0:35,0:35:90.26:0,90,1065	0/0:27,0:27:75.23:0,75,905	0/0:21,0:21:57.17:0,57,689	0/0:20,0:20:57.17:0,57,688	0/0:23,0:23:66.19:0,66,787	1/1:1,20:21:60.09:579,60,0	0/0:15,0:15:39.12:0,39,470	1/1:3,17:20:56.99:526,57,0	1/1:1,10:11:27.04:261,27,0	0/0:22,0:22:60.17:0,60,714	0/0:35,0:35:93.26:0,93,1101	0/0:17,0:17:48.15:0,48,580	0/0:21,0:21:57.17:0,57,688	0/0:32,0:32:84.25:0,84,1005	0/0:4,0:4:12.04:0,12,145	1/1:1,24:25:66.11:637,66,0	0/0:20,0:20:57.17:0,57,689	0/0:28,0:28:78.24:0,78,942	0/0:17,0:17:51.16:0,51,616
chr10	2915941	.	A	ATGG	964.21	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-2.195;DP=605;FS=1.784;HRun=0;HaplotypeScore=92.2808;InbreedingCoeff=0.9424;MQ=73.61;MQ0=1;MQRankSum=0.028;QD=20.09;ReadPosRankSum=2.470;VQSLOD=3.7109;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:35:27.36:0,27,679	0/0:12,0:12:27.06:0,27,354	0/0:36,0:28:6.41:0,6,269	0/0:28,0:27:21.51:0,22,422	0/0:17,0:17:21.07:0,21,291	0/0:21,0:21:27.09:0,27,375	0/0:15,0:15:27.09:0,27,372	0/0:26,0:26:35.90:0,36,457	0/0:22,0:22:36.12:0,36,500	0/0:25,0:25:24.08:0,24,333	0/0:14,0:14:15.05:0,15,208	0/0:23,0:24:51.11:0,51,653	0/0:26,0:26:48.16:0,48,666	0/0:17,0:17:21.07:0,21,285	0/0:15,0:15:24.08:0,24,333	0/0:24,0:24:51.17:0,51,708	0/0:25,0:25:51.15:0,51,690	0/0:12,0:12:24.02:0,24,294	0/0:21,0:20:27.08:0,27,357	0/0:19,0:19:33.08:0,33,436	0/0:28,0:28:45.15:0,45,624	0/0:15,0:15:27.09:0,27,375	0/0:27,0:27:21.07:0,21,290	0/0:30,0:31:75.22:0,75,1017	0/0:22,0:22:27.09:0,27,374	1/1:15,6:21:21.07:414,21,0	1/1:10,5:16:21.06:391,21,0	1/1:3,8:11:15.05:298,15,0
chr10	2916577	.	C	CTT	2246.28	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-1.666;DP=532;FS=1.585;HRun=9;HaplotypeScore=69.2122;InbreedingCoeff=0.9116;MQ=70.32;MQ0=0;MQRankSum=0.518;QD=21.60;ReadPosRankSum=0.867;VQSLOD=2.6533;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,0:23:34.93:120,35,0	0/0:9,0:10:24.02:0,24,244	0/0:14,0:15:2.67:0,3,96	0/0:11,0:9:3.14:0,3,125	0/0:27,0:26:66.06:0,66,683	0/0:24,0:24:60.14:0,60,639	0/0:12,0:12:27.05:0,27,287	0/0:33,0:33:66.02:0,66,670	0/0:17,0:17:42.09:0,42,447	0/0:23,0:23:60.11:0,60,627	0/0:18,0:18:51.12:0,51,543	0/0:16,0:16:45.09:0,45,471	0/0:17,0:18:44.81:0,45,459	0/0:16,0:16:42.06:0,42,430	1/1:4,8:12:15.05:231,15,0	0/0:16,0:17:44.83:0,45,459	1/1:5,25:31:54.21:874,54,0	1/1:3,15:21:23.90:501,24,0	0/0:24,0:24:63.15:0,63,670	0/0:34,0:34:90.20:0,90,958	0/0:9,0:9:18.03:0,18,192	0/0:14,0:14:42.09:0,42,440	0/0:24,0:24:72.15:0,72,750	0/0:8,0:8:18.04:0,18,191	1/1:1,16:17:45.15:693,45,0	0/0:22,0:22:63.14:0,63,663	0/0:29,0:29:81.17:0,81,846	0/0:7,0:7:18.05:0,18,192
chr10	2917939	.	TTGTG	T	4361.85	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=13.462;DP=875;FS=23.774;HRun=0;HaplotypeScore=157.1553;InbreedingCoeff=0.9996;MQ=61.38;MQ0=2;MQRankSum=-4.076;QD=30.29;ReadPosRankSum=2.404;VQSLOD=3.1609;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,25:28:41.80:631,42,0	0/0:13,0:13:36.12:0,36,939	0/0:48,0:38:89.83:0,90,2122	0/0:33,0:27:69.23:0,69,1549	0/0:24,0:24:66.23:0,66,1742	0/0:26,0:26:75.24:0,75,1909	0/0:23,0:23:64.46:0,64,1586	0/0:44,0:44:99:0,115,2851	0/0:32,0:32:87.30:0,87,2225	0/0:34,0:34:96.33:0,96,2456	0/0:30,0:30:87.30:0,87,2268	0/0:22,0:22:63.22:0,63,1572	0/0:29,0:29:75.26:0,75,1915	0/0:30,0:30:84.29:0,84,2124	1/1:3,35:38:81.15:1384,81,0	0/0:31,0:31:93.29:0,93,2240	1/1:4,18:22:27.09:497,27,0	1/1:2,22:24:30.13:721,30,0	0/0:22,0:22:57.19:0,57,1448	0/0:41,0:41:99:0,114,2931	0/0:63,0:63:99:0,172,4335	0/0:26,0:26:75.26:0,75,1904	0/0:30,0:30:81.26:0,81,1992	0/0:32,0:32:84.29:0,84,2141	1/1:2,30:32:69.06:1129,69,0	0/0:53,0:53:99:0,154,3885	0/0:23,0:23:63.22:0,63,1613	0/0:22,0:22:57.20:0,57,1370
chr10	2919978	.	ATG	A	263.75	PASS	AB=0.950;AC=4;AF=0.071;AN=56;BaseQRankSum=3.173;DP=715;FS=1.396;HRun=0;HaplotypeScore=89.2274;InbreedingCoeff=0.3050;MQ=57.06;MQ0=27;MQRankSum=-0.562;QD=2.75;ReadPosRankSum=-3.271;VQSLOD=1.2462;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:36,1:34:16.44:16,0,891	0/0:12,0:12:36.12:0,36,576	0/0:27,0:8:12.04:0,12,180	0/0:39,0:18:24.89:0,25,418	0/0:26,0:26:72.25:0,72,1172	0/0:25,0:24:63.20:0,63,991	0/0:23,0:23:57.15:0,57,862	1/1:34,0:31:15.28:306,15,0	0/0:27,0:27:75.26:0,75,1216	0/0:30,0:29:81.23:0,81,1295	0/0:9,0:9:6.11:0,6,288	0/0:18,0:18:51.17:0,51,831	0/0:21,0:21:7.69:0,8,601	0/0:20,0:20:30.47:0,30,702	0/0:22,2:24:60.20:0,60,957	0/0:21,0:21:60.20:0,60,961	0/0:25,0:24:25.62:0,26,882	0/0:18,0:18:27.51:0,28,462	0/1:23,2:20:52.01:52,0,576	0/0:26,0:26:32.68:0,33,994	0/0:61,0:59:99:0,120,1917	0/0:22,2:24:20.77:0,21,853	0/0:13,1:14:1.62:0,2,547	0/0:33,0:33:26.21:0,26,1156	0/0:36,0:36:99:0,102,1613	0/0:32,0:31:43.86:0,44,1196	0/0:18,0:18:48.16:0,48,771	0/0:9,0:9:0.53:0,1,277
chr10	2922026	.	T	TA	7520.28	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-1.871;DP=558;FS=1.883;HRun=4;HaplotypeScore=58.0349;InbreedingCoeff=0.9774;MQ=67.70;MQ0=0;MQRankSum=-1.457;QD=34.34;ReadPosRankSum=1.781;VQSLOD=5.4866;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,28:30:81.27:1107,81,0	0/0:11,0:11:33.09:0,33,374	0/0:9,0:9:23.90:0,24,246	0/0:4,0:4:9.03:0,9,102	0/0:35,0:35:99:0,99,1089	0/0:21,0:21:63.10:0,63,690	0/0:18,0:18:54.15:0,54,612	1/1:7,30:37:10.66:1124,11,0	0/0:14,0:14:42.11:0,42,468	0/0:27,0:27:81.21:0,81,897	0/0:31,0:31:90.22:0,90,994	0/0:16,0:16:48.11:0,48,524	0/0:23,0:23:63.18:0,63,713	0/0:21,0:21:58.03:0,58,639	1/1:0,20:20:54.18:738,54,0	0/0:11,0:11:30.09:0,30,340	1/1:0,22:22:60.20:820,60,0	1/1:1,21:22:51.17:697,51,0	0/0:20,0:20:54.15:0,54,612	0/0:19,0:19:57.16:0,57,639	0/0:10,0:10:30.09:0,30,340	0/0:10,0:10:30.07:0,30,329	0/0:20,0:20:60.16:0,60,672	0/0:19,0:19:57.16:0,57,646	1/1:2,23:25:60.20:820,60,0	1/1:4,23:27:17.25:903,17,0	1/1:0,32:32:84.28:1148,84,0	1/1:0,4:4:12.04:164,12,0
chr10	2922625	.	CCAG	C	11443.59	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=17.799;DP=761;FS=1.286;HRun=0;HaplotypeScore=110.0292;InbreedingCoeff=0.9973;MQ=69.39;MQ0=0;MQRankSum=-6.490;QD=45.41;ReadPosRankSum=3.431;VQSLOD=6.8499;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,54:54:99:2226,120,0	0/0:12,0:12:36.10:0,36,835	0/0:27,0:27:80.96:0,81,1607	0/0:30,0:30:59.31:0,59,1851	0/0:45,0:45:99:0,135,3128	0/0:24,0:24:72.23:0,72,1724	0/0:25,0:25:75.21:0,75,1607	1/1:0,28:28:84.17:1367,84,0	0/0:16,0:16:48.15:0,48,1133	0/0:33,0:33:99:0,99,2369	0/0:20,0:20:57.16:0,57,1259	0/0:24,0:24:72.23:0,72,1722	0/0:25,0:25:75.24:0,75,1775	0/0:26,0:26:78.23:0,78,1776	1/1:0,38:38:93.32:1727,93,0	0/0:38,0:38:99:0,114,2711	1/1:0,29:29:78.27:1447,78,0	1/1:0,11:11:27.09:502,27,0	0/0:18,0:18:54.13:0,54,1050	0/0:31,0:31:93.26:0,93,2090	0/0:30,0:30:90.26:0,90,2069	0/0:25,0:25:74.97:0,75,1689	0/0:23,0:23:66.23:0,66,1623	0/0:37,0:37:99:0,111,2683	1/1:0,26:26:60.21:1114,60,0	1/1:1,28:29:59.27:1451,59,0	1/1:0,31:31:72.22:1331,72,0	1/1:0,6:6:15.05:279,15,0
chr10	2922893	.	CA	C	5427.28	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=13.277;DP=768;FS=1.323;HRun=9;HaplotypeScore=80.2456;InbreedingCoeff=0.9978;MQ=79.22;MQ0=1;MQRankSum=-0.850;QD=21.97;ReadPosRankSum=0.211;VQSLOD=5.4443;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,26:27:65.07:583,65,0	0/0:9,0:9:27.05:0,27,298	0/0:37,0:34:46.76:0,47,825	0/0:32,0:27:20.73:0,21,332	0/0:42,0:42:99:0,105,1202	0/0:24,0:24:69.20:0,69,796	0/0:29,0:29:81.11:0,81,878	1/1:5,31:36:93.02:844,93,0	0/0:31,0:31:84.19:0,84,942	0/0:35,0:35:90.26:0,90,1033	0/0:28,1:29:50.96:0,51,828	0/0:20,0:20:54.16:0,54,623	0/0:17,0:17:51.14:0,51,579	0/0:25,0:25:72.21:0,72,831	1/1:6,22:28:60.02:549,60,0	0/0:25,0:25:69.18:0,69,776	1/1:2,29:31:78.04:713,78,0	1/1:2,15:17:39.02:357,39,0	0/0:22,0:22:63.18:0,63,716	0/0:43,0:43:99:0,123,1410	0/0:24,0:24:69.20:0,69,789	0/0:28,0:28:75.18:0,75,834	0/0:27,0:27:49.41:0,49,701	0/0:21,0:21:60.18:0,60,692	1/1:0,25:25:69.04:631,69,0	1/1:7,27:34:17.72:653,18,0	1/1:6,28:34:78.04:714,78,0	1/1:0,15:15:42.02:384,42,0
chr10	2924064	.	GA	G	556.26	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.503;DP=518;FS=7.079;HRun=7;HaplotypeScore=80.6886;InbreedingCoeff=0.8013;MQ=53.89;MQ0=16;MQRankSum=-5.717;QD=21.39;ReadPosRankSum=-1.161;VQSLOD=2.5681;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:39:99:0,99,1099	0/0:9,0:9:27.04:0,27,319	0/0:11,0:6:7.96:0,8,54	0/0:7,0:3:4.80:0,5,47	0/0:36,0:36:89.86:0,90,1056	0/0:21,0:21:55.41:0,55,700	0/0:16,0:16:42.12:0,42,524	1/1:4,22:22:63.14:651,63,0	0/0:15,0:15:38.87:0,39,436	0/0:21,0:20:54.16:0,54,662	0/0:23,0:23:53.85:0,54,645	0/0:18,0:18:45.13:0,45,558	0/0:17,0:17:36.01:0,36,421	0/0:14,0:14:39:0,39,457	0/0:15,0:15:23.35:0,23,266	0/0:9,0:9:24.08:0,24,311	0/0:23,0:22:50.46:0,50,518	0/0:9,0:8:17.54:0,18,183	0/0:21,0:21:54.58:0,55,658	0/0:31,0:30:80.68:0,81,950	0/0:5,0:5:15.05:0,15,196	0/0:16,0:15:36.08:0,36,416	0/0:20,0:20:54.10:0,54,653	0/0:18,0:16:47.18:0,47,542	0/0:10,0:10:18.04:0,18,196	0/0:24,0:24:64.13:0,64,728	0/0:26,0:25:50.72:0,51,562	0/0:15,0:13:21.03:0,21,209
chr10	2924071	.	GAA	G	2238.17	PASS	AB=0.800;AC=14;AF=0.250;AN=56;BaseQRankSum=9.761;DP=540;FS=0.000;HRun=12;HaplotypeScore=85.6619;InbreedingCoeff=0.7713;MQ=54.87;MQ0=14;MQRankSum=-1.134;QD=15.02;ReadPosRankSum=3.908;VQSLOD=2.5424;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,33:39:84.15:854,84,0	0/0:8,0:9:17.55:0,18,232	0/1:12,0:6:2.38:2,0,81	0/0:9,0:4:1.42:0,1,66	0/0:31,0:35:83.03:0,83,980	0/0:22,0:23:62.42:0,62,849	0/0:18,0:18:51.03:0,51,653	1/1:7,23:27:75:706,75,0	0/0:14,0:15:38.34:0,38,421	0/0:24,0:24:47.57:0,48,576	0/0:20,0:23:38.25:0,38,477	0/0:16,0:17:26.58:0,27,365	0/0:12,0:13:29.51:0,30,363	0/0:16,0:16:39:0,39,502	1/1:4,11:15:16.53:181,17,0	0/0:9,0:9:18.06:0,18,269	1/1:3,18:20:39.07:396,39,0	1/1:3,4:8:5.72:113,6,0	0/0:24,0:25:65.81:0,66,808	0/0:35,0:34:72.57:0,73,932	0/0:5,0:5:15.05:0,15,224	0/0:14,0:14:29.58:0,30,394	0/0:21,0:23:56.15:0,56,743	0/0:18,0:18:50.14:0,50,670	1/1:1,8:9:15.03:153,15,0	0/0:9,0:29:56.72:0,57,266	0/0:6,1:26:14.63:0,15,127	0/1:4,1:10:15.03:15,0,28
chr10	2925685	.	G	GA	90.28	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=1.003;DP=766;FS=0.000;HRun=0;HaplotypeScore=60.3123;InbreedingCoeff=0.8204;MQ=47.67;MQ0=111;MQRankSum=-3.100;QD=10.03;ReadPosRankSum=-0.212;VQSLOD=3.1528;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,5:5:9.03:143,9,0	0/0:11,0:11:33.11:0,33,461	0/0:65,0:3:9.03:0,9,113	0/0:59,0:5:15.05:0,15,203	0/0:32,0:31:75.23:0,75,1029	0/0:36,0:33:66.22:0,66,913	0/0:28,0:28:60.20:0,60,838	0/0:30,0:7:21.07:0,21,293	0/0:25,0:25:48.16:0,48,671	0/0:33,0:31:93.31:0,93,1300	0/0:24,0:24:63.21:0,63,880	0/0:27,0:27:66.22:0,66,922	0/0:27,0:27:45.01:0,45,620	0/0:20,1:20:45.12:0,45,620	0/0:33,0:33:66.19:0,66,894	0/0:14,0:14:18.06:0,18,251	1/1:0,2:2:3.01:48,3,0	0/0:22,0:21:48.16:0,48,671	0/0:17,0:10:30.10:0,30,420	0/0:41,0:41:99:0,117,1626	0/0:35,0:35:90.28:0,90,1232	0/0:35,0:35:84.25:0,84,1142	0/0:38,0:37:96.32:0,96,1335	0/0:22,0:22:42.12:0,42,562	0/0:19,0:19:51.17:0,51,712	0/0:32,1:30:87.29:0,87,1212	0/0:23,0:22:39.13:0,39,545	0/0:7,0:7:18.06:0,18,252
chr10	2926261	.	AAACAAAG	A	365.33	PASS	AB=0.667;AC=3;AF=0.056;AN=54;BaseQRankSum=3.599;DP=649;FS=14.012;HRun=0;HaplotypeScore=91.8962;InbreedingCoeff=0.3835;MQ=40.17;MQ0=95;MQRankSum=-3.281;QD=18.27;ReadPosRankSum=1.822;VQSLOD=1.4903;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:16:30.10:0,30,1132	0/0:13,0:13:30.10:0,30,1206	0/0:14,0:5:3.01:0,3,75	0/0:18,0:6:9.03:0,9,364	0/0:27,0:24:51.18:0,51,1996	0/0:34,0:28:60.21:0,60,2230	0/0:21,0:11:27.09:0,27,1007	0/0:34,0:10:30.09:0,30,1064	0/0:32,0:26:30.10:0,30,1202	0/0:41,0:38:99:0,108,4222	0/0:26,0:22:39.13:0,39,1572	0/0:27,0:21:39.13:0,39,1548	0/0:14,0:10:14.58:0,15,530	0/0:18,0:13:24.08:0,24,882	0/1:5,5:7:91.20:377,0,91	0/0:21,0:12:24.08:0,24,902	0/0:32,0:29:57.17:0,57,2057	1/1:6,4:5:3.01:79,3,0	0/0:29,0:16:36.11:0,36,1238	0/0:45,0:34:82.48:0,82,2970	0/0:15,0:13:39.10:0,39,1406	0/0:20,0:20:45.15:0,45,1744	0/0:33,0:29:51.18:0,51,1940	0/0:16,0:12:18.06:0,18,727	./.	0/0:19,0:14:36.12:0,36,1453	0/0:33,0:23:63.22:0,63,2541	0/0:18,0:17:27.09:0,27,1090
chr10	2927681	.	C	CCCACACACA	5420.98	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=4.110;DP=506;FS=3.546;HRun=0;HaplotypeScore=141.1752;InbreedingCoeff=0.9508;MQ=80.99;MQ0=1;MQRankSum=-6.985;QD=38.72;ReadPosRankSum=2.364;VQSLOD=4.6877;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,0:37:10.84:27,11,0	0/0:7,0:7:11.99:0,12,290	0/0:30,0:30:26.26:0,26,1564	0/0:28,0:28:34.82:0,35,1693	0/0:16,0:16:45.15:0,45,1158	0/0:19,0:19:51.16:0,51,1350	0/0:12,0:12:30.09:0,30,821	0/0:24,0:24:72.23:0,72,1948	0/0:21,0:21:60.16:0,60,1523	0/0:19,0:19:57.17:0,57,1447	0/0:18,0:18:51.17:0,51,1432	0/0:12,0:12:33.10:0,33,775	0/0:15,0:15:42.13:0,42,1158	0/0:19,0:19:57.18:0,57,1511	1/1:3,0:25:9.50:311,10,0	0/0:12,0:12:33.11:0,33,901	1/1:2,0:9:21.07:585,21,0	1/1:4,7:13:18.06:810,18,0	0/0:14,0:14:42.12:0,42,1069	0/0:21,0:21:63.19:0,63,1595	0/0:21,0:21:63.15:0,63,1587	0/0:16,0:16:39.13:0,39,1111	0/0:23,0:23:57.17:0,57,1512	0/0:19,0:19:51.12:0,51,1350	1/1:1,8:14:12.04:576,12,0	1/1:7,11:23:60.17:2122,60,0	1/1:2,8:15:15.05:701,15,0	1/1:1,1:3:6.02:289,6,0
chr10	2928266	.	CT	C	1493.17	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.135;DP=537;FS=13.715;HRun=3;HaplotypeScore=63.1113;InbreedingCoeff=0.9427;MQ=76.46;MQ0=4;MQRankSum=-1.833;QD=28.17;ReadPosRankSum=0.425;VQSLOD=1.8962;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,26:27:69.22:854,69,0	0/0:4,0:4:12.04:0,12,171	0/0:47,1:35:7.51:0,8,750	0/0:60,3:32:58.45:0,58,693	0/0:10,0:10:30.09:0,30,414	0/0:14,0:14:42.14:0,42,605	0/0:16,0:15:45.10:0,45,606	0/0:27,0:27:78.26:0,78,1117	0/0:22,0:22:63.17:0,63,852	0/0:9,0:9:27.09:0,27,389	0/0:14,0:14:42.13:0,42,582	0/0:21,0:21:63.18:0,63,872	0/0:22,0:22:66.22:0,66,942	0/0:23,0:23:69.23:0,69,989	0/0:18,0:18:54.18:0,54,778	0/0:10,0:10:27.08:0,27,372	1/1:2,23:25:63.13:761,63,0	0/0:9,0:9:24.05:0,24,323	0/0:13,0:13:36.09:0,36,468	0/0:11,0:11:30.10:0,30,432	0/0:21,0:20:60.17:0,60,826	0/0:12,0:12:30.10:0,30,424	0/0:13,0:13:39.13:0,39,553	0/0:22,0:22:60.13:0,60,839	0/0:15,0:15:45.15:0,45,648	0/0:22,0:22:66.21:0,66,934	0/0:10,0:10:30.07:0,30,395	0/0:10,0:10:27.09:0,27,389
chr10	2931118	.	A	AG	7423.10	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-12.641;DP=661;FS=1.418;HRun=2;HaplotypeScore=62.4615;InbreedingCoeff=0.9845;MQ=73.55;MQ0=0;MQRankSum=-2.647;QD=37.49;ReadPosRankSum=-0.574;VQSLOD=5.1311;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,18:22:48.16:690,48,0	0/0:12,0:12:36.11:0,36,446	0/0:27,0:28:57.76:0,58,799	0/0:20,0:20:46.62:0,47,548	0/0:29,0:29:84.26:0,84,1041	0/0:28,0:28:81.21:0,81,965	0/0:14,0:14:33.10:0,33,409	1/1:0,30:30:90.28:1258,90,0	0/0:20,0:20:57.16:0,57,684	0/0:31,0:31:93.29:0,93,1144	0/0:32,0:31:96.28:0,96,1165	0/0:23,0:23:66.19:0,66,805	0/0:34,0:34:99:0,102,1240	0/0:29,0:29:84.26:0,84,1041	1/1:1,19:19:57.19:820,57,0	0/0:21,0:21:63.20:0,63,781	1/1:3,19:22:57.19:819,57,0	1/1:3,5:8:18.06:254,18,0	0/0:26,0:26:72.20:0,72,868	0/0:30,0:30:84.26:0,84,1038	0/0:33,0:33:93.29:0,93,1152	0/0:18,0:18:48.15:0,48,595	0/0:24,0:24:72.23:0,72,892	0/0:11,0:11:33.09:0,33,396	1/1:0,12:12:36.12:518,36,0	1/1:4,25:29:6.84:951,7,0	1/1:1,40:41:99:1510,105,0	1/1:0,14:14:42.14:604,42,0
chr10	2932115	.	A	AG	540.05	PASS	AB=0.967;AC=4;AF=0.071;AN=56;BaseQRankSum=-4.329;DP=489;FS=4.056;HRun=8;HaplotypeScore=63.3607;InbreedingCoeff=0.5112;MQ=73.74;MQ0=2;MQRankSum=0.872;QD=8.31;ReadPosRankSum=-0.502;VQSLOD=1.1528;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:60.01:0,60,549	0/0:10,0:10:24.01:0,24,219	0/0:24,0:16:21.18:0,21,182	0/1:21,0:16:22.03:22,0,88	0/0:20,0:20:54.03:0,54,494	0/0:12,0:12:27.01:0,27,247	0/0:11,0:11:17.99:0,18,161	0/0:20,1:21:47.98:0,48,426	0/0:20,0:20:54.01:0,54,488	0/0:15,0:15:33.01:0,33,302	0/0:12,0:12:27:0,27,243	0/1:13,1:14:1.60:2,0,241	0/0:10,0:10:23.98:0,24,213	0/0:19,0:19:48.02:0,48,439	0/0:19,0:19:51.01:0,51,462	0/0:14,0:14:39.02:0,39,357	1/1:4,25:29:54.16:623,54,0	0/0:5,0:5:12.01:0,12,110	0/0:15,0:15:36.01:0,36,329	0/0:13,0:13:36.01:0,36,329	0/0:23,0:23:41.97:0,42,377	0/0:23,0:23:63.03:0,63,576	0/0:17,0:17:38.95:0,39,344	0/0:21,0:21:47.98:0,48,432	0/0:14,0:14:36.01:0,36,329	0/0:19,0:19:38.83:0,39,354	0/0:25,0:25:62.99:0,63,576	0/0:14,0:14:42.02:0,42,384
chr10	2932812	.	GAGA	G	391.46	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.731;DP=328;FS=5.171;HRun=0;HaplotypeScore=62.1759;InbreedingCoeff=0.9173;MQ=86.35;MQ0=0;MQRankSum=-3.761;QD=24.47;ReadPosRankSum=0.618;VQSLOD=2.6193;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:66.11:0,66,1380	0/0:11,0:11:30.10:0,30,669	0/0:14,0:14:36.11:0,36,744	0/0:11,0:11:33.08:0,33,618	0/0:11,0:11:33.11:0,33,737	0/0:16,0:16:42.14:0,42,938	0/0:12,0:13:34.36:0,34,739	0/0:22,0:22:60.21:0,60,1328	0/0:12,0:12:30.10:0,30,670	0/0:11,0:11:30.10:0,30,671	0/0:8,0:8:24.08:0,24,517	0/0:5,0:5:15.05:0,15,317	0/0:6,0:6:18.04:0,18,359	0/0:6,0:6:18.06:0,18,400	0/0:11,0:11:33.11:0,33,736	0/0:10,0:10:27.08:0,27,563	1/1:4,12:16:28.20:486,28,0	0/0:9,0:9:27.09:0,27,594	0/0:10,0:10:24.08:0,24,536	0/0:7,0:7:18.06:0,18,402	0/0:9,0:9:27.08:0,27,560	0/0:4,0:4:12.04:0,12,268	0/0:11,0:11:30.08:0,30,585	0/0:7,0:7:18.06:0,18,402	0/0:18,0:18:54.19:0,54,1206	0/0:14,0:14:36.12:0,36,804	0/0:20,0:20:48.16:0,48,1070	0/0:12,0:12:36.12:0,36,798
chr10	2932842	.	AGGGG	A	3126.04	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=0.127;DP=315;FS=6.206;HRun=10;HaplotypeScore=62.7803;InbreedingCoeff=0.9554;MQ=66.88;MQ0=1;MQRankSum=-0.059;QD=39.08;ReadPosRankSum=8.076;VQSLOD=1.5751;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:1,0:11:25.99:0,26,148	0/0:11,0:11:20.77:0,21,353	0/0:5,0:4:9.03:0,9,152	0/0:8,0:7:12.03:0,12,229	0/0:10,0:10:17.69:0,18,256	0/0:12,0:13:27.07:0,27,478	0/0:16,0:16:39.01:0,39,640	0/0:8,0:22:38.97:0,39,403	0/0:15,0:16:38:0,38,552	0/0:10,0:10:21.02:0,21,237	0/0:11,0:11:30.06:0,30,565	0/0:11,0:12:32.98:0,33,454	0/0:8,0:8:17.96:0,18,185	0/0:9,0:9:24.06:0,24,424	1/1:0,9:9:24.08:388,24,0	0/0:7,0:9:24.06:0,24,394	0/0:6,0:16:42.11:0,42,493	1/1:1,11:12:24.08:388,24,0	0/0:12,0:12:24:0,24,353	0/0:7,0:9:21.88:0,22,339	0/0:7,0:8:15.03:0,15,235	0/0:7,0:7:12.03:0,12,255	0/0:1,0:7:18.06:0,18,226	0/0:4,0:4:12.04:0,12,227	1/1:0,7:7:18.06:291,18,0	1/1:3,16:19:51.15:794,51,0	1/1:2,17:19:54.18:868,54,0	1/1:2,12:14:36.11:583,36,0
chr10	2933651	.	TA	T	2689.75	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=10.171;DP=684;FS=1.471;HRun=2;HaplotypeScore=71.7480;InbreedingCoeff=0.9991;MQ=64.78;MQ0=4;MQRankSum=1.429;QD=34.05;ReadPosRankSum=0.284;VQSLOD=3.6975;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:58.40:0,58,837	0/0:8,0:8:24.08:0,24,360	0/0:27,0:24:43.92:0,44,915	0/0:23,0:16:42.11:0,42,603	0/0:40,0:40:99:0,120,1777	0/0:28,0:28:84.28:0,84,1258	0/0:22,0:22:66.21:0,66,967	0/0:36,0:35:99:0,108,1564	0/0:16,0:16:45.15:0,45,674	0/0:36,0:36:99:0,108,1560	0/0:21,0:21:63.20:0,63,923	0/0:29,0:29:87.28:0,87,1284	0/0:20,0:20:60.19:0,60,878	0/0:31,0:31:93.29:0,93,1354	0/0:30,0:30:90.29:0,90,1328	0/0:14,0:14:42.14:0,42,630	0/0:23,0:23:53.05:0,53,779	0/0:17,0:17:45.15:0,45,659	0/0:18,0:17:48.14:0,48,698	0/0:32,0:32:96.30:0,96,1400	0/0:22,0:22:63.20:0,63,925	0/0:20,0:20:60.20:0,60,899	0/0:23,0:23:69.21:0,69,994	0/0:24,0:23:63.17:0,63,916	0/0:21,0:21:63.21:0,63,942	1/1:1,33:34:57.34:1220,57,0	1/1:2,32:34:93.19:1184,93,0	1/1:0,11:11:33.11:428,33,0
chr10	2933861	.	CT	C	4862.42	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=11.432;DP=581;FS=3.942;HRun=1;HaplotypeScore=54.8346;InbreedingCoeff=0.9636;MQ=80.64;MQ0=0;MQRankSum=-1.930;QD=39.86;ReadPosRankSum=4.341;VQSLOD=5.3676;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:54.18:0,54,862	0/0:13,0:13:39.13:0,39,624	0/0:21,0:21:59.87:0,60,891	0/0:16,0:16:39.13:0,39,604	0/0:33,0:33:99:0,99,1582	0/0:29,0:29:87.30:0,87,1391	0/0:20,0:20:60.20:0,60,955	0/0:26,0:26:78.26:0,78,1228	0/0:21,0:21:60.19:0,60,936	0/0:24,0:24:72.21:0,72,1086	0/0:21,0:21:63.21:0,63,1004	0/0:17,0:17:51.17:0,51,815	0/0:28,0:28:84.29:0,84,1334	0/0:23,0:23:69.24:0,69,1103	1/1:0,32:32:87.29:1217,87,0	0/0:21,0:21:63.21:0,63,1005	0/0:12,0:12:27.05:0,27,403	1/1:0,14:14:39.13:541,39,0	0/0:19,0:19:57.19:0,57,909	0/0:32,0:32:96.31:0,96,1510	0/0:14,0:14:39.12:0,39,600	0/0:16,0:16:48.16:0,48,767	0/0:18,0:18:54.18:0,54,858	0/0:16,0:16:48.16:0,48,767	1/1:0,21:21:60.20:839,60,0	1/1:0,29:29:87.29:1217,87,0	1/1:0,25:25:72.24:1007,72,0	1/1:0,1:1:3.01:42,3,0
chr10	2934618	.	T	TA	2837.32	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=11.774;DP=507;FS=1.442;HRun=7;HaplotypeScore=62.7116;InbreedingCoeff=0.9888;MQ=73.45;MQ0=0;MQRankSum=-1.271;QD=26.27;ReadPosRankSum=2.185;VQSLOD=4.4587;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:45.07:0,45,433	0/0:7,0:7:21.03:0,21,199	0/0:20,0:20:44.03:0,44,385	0/0:11,0:10:20.23:0,20,194	0/0:32,0:32:90.13:0,90,859	0/0:16,0:16:45.07:0,45,434	0/0:7,0:7:12.02:0,12,116	0/0:30,0:30:84.07:0,84,786	0/0:16,0:16:39.05:0,39,371	0/0:26,0:26:75.12:0,75,724	0/0:27,0:27:78.11:0,78,747	0/0:18,0:18:51.06:0,51,485	0/0:17,0:17:48.07:0,48,462	0/0:17,0:17:48.08:0,48,463	1/1:4,15:19:36.11:435,36,0	0/0:24,0:24:69.08:0,69,652	0/0:11,0:11:24.03:0,24,231	1/1:1,12:13:32.78:398,33,0	0/0:19,0:19:45.07:0,45,434	0/0:33,0:33:93.14:0,93,898	0/0:6,0:6:18.01:0,18,167	0/0:12,0:12:33.05:0,33,318	0/0:19,0:19:54.07:0,54,515	0/0:13,0:13:33.03:0,33,311	1/1:2,17:19:36.11:435,36,0	1/1:3,24:27:46.23:827,46,0	1/1:2,20:22:57.17:689,57,0	1/1:2,6:8:21.05:242,21,0
chr10	2935270	.	GA	G	2254.10	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=8.961;DP=458;FS=0.443;HRun=7;HaplotypeScore=52.6249;InbreedingCoeff=0.9825;MQ=68.54;MQ0=0;MQRankSum=-0.308;QD=24.50;ReadPosRankSum=2.917;VQSLOD=3.9613;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:38.09:0,38,617	0/0:7,0:7:18.03:0,18,211	0/0:16,0:14:25.82:0,26,345	0/0:13,0:13:27.04:0,27,317	0/0:27,0:27:75.21:0,75,916	0/0:25,0:25:63.15:0,63,752	0/0:6,0:6:12.04:0,12,151	0/0:29,0:29:69.18:0,69,831	0/0:13,0:13:36.11:0,36,441	0/0:23,0:23:66.18:0,66,798	0/0:20,0:20:57.17:0,57,700	0/0:17,0:17:39.12:0,39,480	0/0:9,0:9:24.07:0,24,290	0/0:10,0:10:27.09:0,27,340	1/1:3,9:12:30.04:298,30,0	0/0:9,0:9:27.09:0,27,340	0/0:8,0:8:21.07:0,21,259	1/1:2,7:9:17.02:207,17,0	0/0:23,0:23:69.21:0,69,856	0/0:33,0:33:93.27:0,93,1148	0/0:14,0:14:39.09:0,39,474	0/0:9,0:9:24.08:0,24,302	0/0:23,0:23:63.19:0,63,776	0/0:10,0:10:30.07:0,30,351	1/1:2,14:16:48.11:488,48,0	1/1:3,15:18:13.36:447,13,0	1/1:2,23:25:69.15:704,69,0	1/1:4,8:12:32.94:296,33,0
chr10	2935330	.	TAAA	T	2208.35	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=5.106;DP=482;FS=0.000;HRun=13;HaplotypeScore=82.5061;InbreedingCoeff=0.9718;MQ=72.75;MQ0=0;MQRankSum=-1.223;QD=24.54;ReadPosRankSum=3.267;VQSLOD=2.9240;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:17:44.74:0,45,349	0/0:5,0:5:12.04:0,12,222	0/0:18,0:16:21.64:0,22,380	0/0:6,0:6:10.51:0,11,78	0/0:23,0:25:61.44:0,61,1077	0/0:26,0:26:57.15:0,57,984	0/0:8,0:8:24.08:0,24,407	1/1:7,15:23:37.21:448,37,0	0/0:22,0:23:69.19:0,69,1177	0/0:31,0:33:87.23:0,87,1449	0/0:18,0:18:45.10:0,45,788	0/0:10,0:13:36.01:0,36,493	0/0:11,0:11:27.08:0,27,417	0/0:7,0:7:21.07:0,21,364	0/0:2,0:16:47.87:0,48,413	0/0:15,0:15:36.11:0,36,623	0/0:15,0:17:37.64:0,38,584	0/0:3,0:17:41.86:0,42,339	0/0:16,0:20:48.09:0,48,734	0/0:25,0:28:66.17:0,66,1110	0/0:5,0:7:18.04:0,18,311	0/0:14,0:14:39.13:0,39,690	0/0:20,0:21:51.15:0,51,927	0/0:8,0:9:24.02:0,24,381	0/0:5,0:18:43.12:0,43,348	1/1:2,25:27:72.16:862,72,0	1/1:6,24:30:69.12:839,69,0	1/1:0,10:10:18.06:219,18,0
chr10	2936156	.	T	TA	5474.47	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-13.630;DP=606;FS=0.710;HRun=8;HaplotypeScore=55.9305;InbreedingCoeff=0.9946;MQ=79.04;MQ0=0;MQRankSum=-3.621;QD=28.51;ReadPosRankSum=-0.039;VQSLOD=4.9699;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,31:36:59.75:927,60,0	0/0:10,0:10:27:0,27,242	0/0:15,0:15:38.99:0,39,347	0/0:12,0:12:33.02:0,33,302	0/0:32,0:32:81.04:0,81,741	0/0:35,0:35:93.02:0,93,846	0/0:21,0:21:54.01:0,54,489	1/1:1,27:28:78.20:878,78,0	0/0:23,0:23:63.03:0,63,577	0/0:17,0:17:36.01:0,36,329	0/0:34,0:34:93.04:0,93,851	0/0:12,0:12:33.01:0,33,302	0/0:22,0:22:53.98:0,54,482	0/0:17,0:17:45.02:0,45,412	1/1:2,22:24:57.17:658,57,0	0/0:25,0:25:72.04:0,72,659	1/1:2,18:20:48.14:553,48,0	1/1:1,4:5:12.04:138,12,0	0/0:18,0:18:51.02:0,51,466	0/0:38,0:38:93.03:0,93,851	0/0:26,0:26:72.04:0,72,659	0/0:19,0:19:54.03:0,54,494	0/0:19,0:19:42.01:0,42,384	0/0:19,0:19:51.02:0,51,467	1/1:1,25:26:63.19:727,63,0	1/1:4,17:21:51.15:589,51,0	1/1:0,24:24:63.19:727,63,0	1/1:0,8:8:24.07:277,24,0
chr10	2936256	.	T	TTTTG	1732.36	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=2.930;DP=643;FS=2.278;HRun=0;HaplotypeScore=114.0363;InbreedingCoeff=0.9203;MQ=65.79;MQ0=2;MQRankSum=-1.167;QD=28.87;ReadPosRankSum=-2.027;VQSLOD=2.8879;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:42.08:0,42,588	0/0:12,0:12:30.10:0,30,480	0/0:26,0:23:14.84:0,15,177	0/0:17,0:14:6.12:0,6,164	0/0:41,0:41:87.28:0,87,1361	0/0:37,0:37:87.26:0,87,1369	0/0:14,0:14:33.11:0,33,514	1/1:25,4:28:48.10:843,48,0	0/0:21,0:21:44.64:0,45,675	0/0:30,0:30:60.20:0,60,939	0/0:23,0:23:51.17:0,51,805	0/0:15,0:15:33.11:0,33,517	0/0:22,0:22:45.14:0,45,683	0/0:18,0:18:39.12:0,39,573	0/0:20,0:20:42.14:0,42,668	0/0:29,0:29:57.18:0,57,857	1/1:30,0:31:60.17:1011,60,0	0/0:12,0:12:15.45:0,15,207	0/0:21,0:19:33.08:0,33,465	0/0:33,0:33:78.22:0,78,1139	0/0:10,0:10:12.04:0,12,195	0/0:26,0:26:54.17:0,54,833	0/0:20,0:20:54.18:0,54,864	0/0:19,0:19:39.13:0,39,627	0/0:28,0:28:60.20:0,60,947	0/0:31,0:31:72.23:0,72,1113	0/0:23,0:22:48.15:0,48,742	0/0:15,0:15:39.13:0,39,598
chr10	2936272	.	G	GTTTC	1879.80	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=1.744;DP=663;FS=1.288;HRun=0;HaplotypeScore=117.7515;InbreedingCoeff=0.5416;MQ=61.47;MQ0=4;MQRankSum=-2.865;QD=30.82;ReadPosRankSum=-0.348;VQSLOD=3.1969;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:19:47.97:0,48,767	0/0:11,0:11:33.10:0,33,590	0/0:25,0:13:23.27:0,23,318	0/0:32,0:20:5.45:0,5,319	0/0:42,0:42:99:0,114,1852	0/0:33,0:33:99:0,99,1706	0/0:18,0:18:14.29:0,14,681	0/1:34,0:33:99:396,0,283	0/0:21,0:22:59.62:0,60,925	0/0:27,0:27:75.22:0,75,1275	0/0:27,0:27:78.10:0,78,1175	0/0:16,0:16:48.09:0,48,728	0/0:18,0:18:54.14:0,54,913	0/0:19,0:19:57.11:0,57,895	0/0:21,0:21:45.14:0,45,817	0/0:27,0:27:78.13:0,78,1228	1/1:15,12:27:74.99:1589,75,0	0/0:11,0:11:6.43:0,6,280	0/0:22,0:20:60:0,60,817	0/0:37,0:37:99:0,105,1653	0/0:5,0:5:12.04:0,12,227	0/0:23,0:23:63.13:0,63,1078	0/0:22,0:22:61.42:0,61,1071	0/0:24,0:24:63:0,63,921	0/0:26,0:26:75.09:0,75,1242	0/0:29,0:29:81.25:0,81,1435	0/0:25,0:24:66.13:0,66,1028	0/0:19,0:19:54.08:0,54,847
chr10	2936312	.	GT	G	4578.54	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=12.988;DP=709;FS=0.701;HRun=7;HaplotypeScore=77.5926;InbreedingCoeff=0.9918;MQ=67.79;MQ0=6;MQRankSum=-0.826;QD=23.85;ReadPosRankSum=2.147;VQSLOD=5.1009;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,25:28:53.78:659,54,0	0/0:12,0:12:33.11:0,33,415	0/0:46,0:19:42.82:0,43,512	0/0:44,1:31:12.44:0,12,263	0/0:30,0:30:84.26:0,84,1044	0/0:33,0:33:84.27:0,84,1053	0/0:15,0:15:35.73:0,36,435	1/1:9,25:34:75.15:758,75,0	0/0:23,0:23:63.20:0,63,792	0/0:28,0:28:66.20:0,66,816	0/0:36,0:36:99:0,99,1245	0/0:23,0:23:63.18:0,63,777	0/0:18,0:18:51.16:0,51,641	0/0:18,0:18:54.17:0,54,678	1/1:1,19:20:45.10:459,45,0	0/0:32,0:32:93.28:0,93,1154	0/0:21,0:21:35.77:0,36,634	1/1:3,15:18:20.94:321,21,0	0/0:24,0:24:60.10:0,60,711	0/0:45,0:45:99:0,132,1659	0/0:6,0:6:15.05:0,15,189	0/0:17,0:17:45.14:0,45,566	0/0:17,0:17:51.14:0,51,615	0/0:25,0:25:69.18:0,69,850	1/1:2,30:32:87.20:888,87,0	1/1:5,20:25:57.11:576,57,0	1/1:1,21:22:51.01:520,51,0	1/1:0,13:13:39.09:398,39,0
chr10	2937300	.	G	GA	4351.02	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=3.381;DP=647;FS=4.494;HRun=7;HaplotypeScore=64.7057;InbreedingCoeff=0.9675;MQ=68.39;MQ0=0;MQRankSum=-1.639;QD=31.76;ReadPosRankSum=1.599;VQSLOD=5.1252;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:48.04:0,48,456	0/0:12,0:12:30.04:0,30,284	0/0:21,0:21:54.08:0,54,520	0/0:13,0:13:18.15:0,18,268	0/0:34,0:34:99:0,99,950	0/0:24,0:24:63.09:0,63,608	0/0:12,0:13:32.06:0,32,284	0/0:28,0:28:69.11:0,69,666	0/0:29,0:29:75.12:0,75,724	0/0:32,0:32:81.12:0,81,782	0/0:34,0:34:93.15:0,93,898	0/0:28,0:28:81.12:0,81,779	0/0:27,0:27:72.11:0,72,695	0/0:26,0:26:66.09:0,66,637	1/1:2,27:29:78.24:939,78,0	0/0:28,0:28:75.11:0,75,724	0/0:12,0:11:36.06:0,36,348	1/1:2,10:12:4.13:325,4,0	0/0:14,0:14:30.04:0,30,290	0/0:29,0:29:84.13:0,84,811	0/0:13,0:13:39.06:0,39,376	0/0:29,0:29:84.12:0,84,806	0/0:32,0:32:93.15:0,93,898	0/0:12,0:12:30.05:0,30,290	1/1:2,23:25:66.20:797,66,0	1/1:2,26:28:49.26:876,49,0	1/1:0,33:33:93.29:1124,93,0	1/1:2,8:10:24.07:290,24,0
chr10	2937740	.	G	GT	6991.56	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=6.994;DP=691;FS=3.320;HRun=2;HaplotypeScore=84.6028;InbreedingCoeff=0.9363;MQ=80.31;MQ0=0;MQRankSum=-3.121;QD=37.39;ReadPosRankSum=3.395;VQSLOD=5.5381;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,44:44:99:1843,123,0	0/0:18,0:18:51.15:0,51,648	0/1:18,0:18:3.19:3,0,461	0/0:17,0:17:41.71:0,42,468	0/0:20,0:20:46.70:0,47,583	0/0:22,0:22:60.18:0,60,763	0/0:26,0:26:78.25:0,78,1010	0/0:37,0:37:99:0,108,1386	0/0:29,0:29:87.27:0,87,1115	0/0:20,0:20:52.40:0,52,644	0/0:28,0:28:57.18:0,57,730	0/0:24,0:24:69.21:0,69,882	0/0:23,0:23:69.19:0,69,865	0/0:27,0:27:78.10:0,78,995	1/1:1,35:36:99:1484,99,0	0/0:23,0:23:69.22:0,69,896	0/0:22,1:23:24.22:0,24,795	1/1:0,14:14:42.14:629,42,0	0/0:37,0:36:68.57:0,69,1160	0/0:26,0:26:63.29:0,63,767	0/0:41,0:41:99:0,114,1456	0/0:16,0:16:44.98:0,45,548	0/0:15,0:15:37.48:0,37,410	0/0:32,0:32:93.28:0,93,1192	1/1:1,12:13:36.12:540,36,0	1/1:1,21:22:27.27:898,27,0	1/1:2,31:33:87.29:1304,87,0	1/1:1,6:7:21.03:290,21,0
chr10	2938656	.	GTT	G	2200.47	PASS	AB=0.959;AC=14;AF=0.250;AN=56;BaseQRankSum=11.413;DP=525;FS=0.000;HRun=8;HaplotypeScore=77.8368;InbreedingCoeff=0.8158;MQ=72.06;MQ0=6;MQRankSum=-2.148;QD=11.83;ReadPosRankSum=5.278;VQSLOD=-0.0256;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:36,0:36:68.08:450,68,0	0/0:14,0:14:36.12:0,36,607	0/1:44,1:18:45.13:45,0,232	0/0:29,0:13:22.78:0,23,223	0/0:17,0:17:45.15:0,45,756	0/0:17,0:18:45.15:0,45,743	0/0:11,0:11:27.09:0,27,453	0/0:15,0:15:38.57:0,39,352	0/0:7,0:7:21.07:0,21,352	0/0:27,0:27:72.23:0,72,1150	0/0:17,0:17:42.14:0,42,700	0/0:13,0:13:39.13:0,39,649	0/0:15,0:15:42.13:0,42,670	0/0:17,0:17:42.14:0,42,682	1/1:11,1:12:23.94:195,24,0	0/0:11,0:11:33.10:0,33,525	0/0:19,0:19:44.99:0,45,347	1/1:15,0:15:41.90:338,42,0	0/0:14,0:14:36.03:0,36,540	0/0:22,0:22:57.19:0,57,936	0/0:22,0:22:54.18:0,54,889	0/0:13,0:13:39.13:0,39,655	0/0:18,0:18:51.16:0,51,816	0/0:19,0:19:51.17:0,51,844	1/1:25,2:27:40.65:442,41,0	0/1:22,1:23:10.59:442,0,11	1/1:14,0:14:29.92:240,30,0	1/1:10,0:10:29.93:242,30,0
chr10	2938662	.	TTTG	T	4307.93	PASS	AB=0.767;AC=14;AF=0.250;AN=56;BaseQRankSum=9.151;DP=551;FS=0.000;HRun=0;HaplotypeScore=83.1934;InbreedingCoeff=0.8088;MQ=74.66;MQ0=8;MQRankSum=-2.413;QD=22.21;ReadPosRankSum=5.869;VQSLOD=4.5874;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:32,1:31:51.67:199,52,0	0/0:15,0:15:45.14:0,45,930	0/1:57,0:20:17.01:17,0,400	0/0:42,0:17:21.81:0,22,245	0/0:19,0:19:53.84:0,54,1131	0/0:16,0:16:48.16:0,48,1008	0/0:9,0:9:27.09:0,27,601	0/0:16,0:16:19.59:0,20,410	0/0:10,0:10:30.09:0,30,615	0/0:29,0:29:87.04:0,87,1598	0/0:17,0:17:45.14:0,45,995	0/0:13,0:13:39.13:0,39,860	0/0:17,0:17:51.15:0,51,1076	0/0:17,0:17:48.15:0,48,951	1/1:1,11:12:24.08:412,24,0	0/0:13,0:13:39.10:0,39,752	0/0:17,0:17:48.03:0,48,488	1/1:0,15:15:42.14:721,42,0	0/0:15,0:15:45.12:0,45,811	0/0:21,0:21:63.19:0,63,1247	0/0:21,0:21:63.20:0,63,1192	0/0:14,0:14:42.14:0,42,922	0/0:17,0:17:51.16:0,51,1085	0/0:19,0:19:54.17:0,54,1174	1/1:3,26:29:40.97:959,41,0	0/1:3,21:24:55.77:969,0,56	1/1:0,13:13:30.10:515,30,0	1/1:0,10:10:30.10:516,30,0
chr10	2938663	.	TTG	T	2618.01	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=12.997;DP=560;FS=1.219;HRun=0;HaplotypeScore=80.2393;InbreedingCoeff=0.7247;MQ=73.68;MQ0=8;MQRankSum=-1.487;QD=15.49;ReadPosRankSum=6.611;VQSLOD=3.2059;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,30:31:69.20:998,69,0	0/0:15,0:15:45.12:0,45,722	0/0:58,0:20:16.61:0,17,353	0/0:44,0:19:20.99:0,21,161	0/0:19,0:19:32.16:0,32,889	0/0:16,0:16:48.03:0,48,747	0/0:9,0:9:27.08:0,27,462	0/1:16,0:16:46.73:62,0,47	0/0:11,0:11:33.07:0,33,488	0/0:30,0:30:88.83:0,89,1249	0/0:18,0:18:46.38:0,46,778	0/0:14,0:14:42.09:0,42,674	0/0:17,0:17:48.13:0,48,806	0/0:17,0:17:48.10:0,48,719	1/1:12,0:12:23.81:167,24,0	0/0:13,0:13:35.84:0,36,540	0/1:17,0:17:26.23:86,0,26	1/1:15,0:15:41.66:294,42,0	0/0:16,0:16:47.46:0,47,635	0/0:21,0:21:63.11:0,63,912	0/0:21,0:21:62.95:0,63,813	0/0:15,0:15:45.11:0,45,733	0/0:18,0:18:54.07:0,54,870	0/0:19,0:19:54.14:0,54,910	1/1:29,0:29:56.54:399,57,0	0/1:24,0:24:20.77:385,0,21	1/1:13,0:13:29.76:210,30,0	1/1:10,0:10:29.76:210,30,0
chr10	2938664	.	TGG	T	1128.93	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=5.618;DP=570;FS=6.043;HRun=9;HaplotypeScore=87.6409;InbreedingCoeff=0.7670;MQ=74.38;MQ0=8;MQRankSum=-1.625;QD=14.11;ReadPosRankSum=1.402;VQSLOD=1.4904;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:34,0:32:39.91:401,40,0	0/0:15,0:15:42.13:0,42,656	0/0:59,0:22:46.09:0,46,458	0/0:45,0:20:15.74:0,16,153	0/0:19,0:19:54.18:0,54,856	0/0:16,0:16:36.12:0,36,574	0/0:9,0:9:24.06:0,24,365	1/1:4,12:16:36.09:408,36,0	0/0:12,0:12:33.11:0,33,525	0/0:27,0:29:74.59:0,75,1107	0/0:18,0:18:45.15:0,45,703	0/0:15,0:15:36.12:0,36,576	0/0:18,0:18:51.08:0,51,766	0/0:17,0:17:39.12:0,39,595	0/0:12,0:12:2.44:0,2,10	0/0:15,0:15:35.61:0,36,540	1/1:3,14:17:39.11:454,39,0	0/0:15,0:15:4.41:0,4,15	0/0:15,0:16:38.62:0,39,583	0/0:21,0:21:48.14:0,48,719	0/0:22,0:22:42.14:0,42,640	0/0:16,0:16:42.14:0,42,676	0/0:18,0:18:48.15:0,48,733	0/0:19,0:20:51.11:0,51,756	0/0:28,0:28:3.39:0,3,25	0/0:24,0:24:30.27:0,30,170	0/1:13,0:13:2.08:12,0,2	0/0:10,0:10:7.34:0,7,22
chr10	2939356	.	A	ACATG	1846.85	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=-0.501;DP=652;FS=8.464;HRun=0;HaplotypeScore=123.0373;InbreedingCoeff=0.4946;MQ=61.34;MQ0=2;MQRankSum=-2.469;QD=11.99;ReadPosRankSum=2.786;VQSLOD=2.4010;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:17.98:0,18,157	0/0:17,0:17:42.06:0,42,549	0/0:5,0:5:11.90:0,12,99	0/0:5,0:3:6.02:0,6,66	0/0:34,0:34:81.04:0,81,955	0/0:22,0:22:60.05:0,60,701	0/0:16,0:16:18.39:0,18,329	0/0:39,0:39:86.95:0,87,776	0/0:25,0:25:57:0,57,650	0/0:33,0:33:93.22:0,93,1264	0/0:22,0:22:36:0,36,436	0/0:16,0:16:48.08:0,48,656	0/0:24,0:24:42.08:0,42,684	0/0:28,0:28:72.07:0,72,895	0/1:39,0:39:99:286,0,105	0/0:27,0:27:69.06:0,69,834	0/0:17,0:17:32.97:0,33,315	1/1:16,0:15:12.38:158,12,0	0/0:27,0:27:54:0,54,642	0/0:34,0:33:96.14:0,96,1279	0/0:19,0:19:57.07:0,57,737	0/0:26,0:26:72.03:0,72,930	0/0:28,0:28:75.09:0,75,977	0/0:22,0:22:60.06:0,60,759	0/1:23,0:23:92.56:148,0,93	1/1:7,16:23:1.89:715,2,0	0/1:32,0:32:14.52:425,0,15	1/1:21,0:21:12.55:259,13,0
chr10	2939364	.	GCATA	G	1150.97	PASS	AB=0.955;AC=13;AF=0.250;AN=52;BaseQRankSum=8.689;DP=661;FS=5.614;HRun=0;HaplotypeScore=123.4700;InbreedingCoeff=0.5471;MQ=60.43;MQ0=5;MQRankSum=-5.452;QD=6.09;ReadPosRankSum=-0.897;VQSLOD=2.0525;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:5,0:15:3:28,3,0	0/1:15,1:16:19.84:20,0,541	./.	./.	0/0:30,1:31:3.35:0,3,740	0/1:22,2:24:51.83:52,0,465	0/0:15,0:15:18.06:0,18,421	0/0:36,0:35:14.87:0,15,109	0/0:26,0:26:36.02:0,36,550	0/0:33,0:32:57.15:0,57,1171	0/0:20,0:20:27.04:0,27,408	0/0:21,0:21:45.07:0,45,766	0/0:24,0:24:45.11:0,45,875	0/0:29,1:30:7.20:0,7,905	1/1:40,0:40:4.18:500,4,0	0/0:23,0:23:33.09:0,33,689	1/1:8,10:18:12.04:188,12,0	1/1:15,0:14:8.98:90,9,0	0/0:28,0:27:24.07:0,24,471	0/0:37,0:36:50.19:0,50,1332	0/0:22,0:22:45.09:0,45,856	0/0:26,0:26:23.15:0,23,971	0/0:29,0:29:54.11:0,54,1050	0/0:23,0:23:18.10:0,18,689	1/1:26,0:26:15.13:395,15,0	0/0:21,0:21:39.04:0,39,590	0/1:35,0:35:38.99:39,0,735	0/0:18,0:18:24.06:0,24,363
chr10	2939404	.	ACATG	A	2306.41	PASS	AB=0.993;AC=10;AF=0.185;AN=54;BaseQRankSum=11.106;DP=659;FS=0.000;HRun=0;HaplotypeScore=119.7725;InbreedingCoeff=0.4620;MQ=60.87;MQ0=2;MQRankSum=-5.552;QD=12.74;ReadPosRankSum=1.528;VQSLOD=3.0114;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:31.14:0,31,328	0/0:12,0:12:14.11:0,14,672	0/0:3,0:3:8.96:0,9,71	./.	0/0:24,0:24:41.10:0,41,943	0/0:25,0:25:16.10:0,16,710	0/0:28,0:28:81.02:0,81,988	0/0:35,0:33:84.03:0,84,759	0/0:18,0:18:47.31:0,47,786	0/0:26,0:25:69.16:0,69,1381	0/0:16,0:16:45.04:0,45,672	0/0:23,0:23:63.11:0,63,1114	0/0:28,0:28:81.10:0,81,1278	0/0:27,0:27:45.61:0,46,1284	1/1:6,34:40:48.16:815,48,0	0/0:19,0:19:51.08:0,51,922	0/1:24,0:24:39.97:40,0,235	1/1:1,13:14:6.02:105,6,0	0/0:25,0:25:67.91:0,68,936	0/0:45,0:44:99:0,117,1856	0/0:27,0:27:78.10:0,78,1306	0/0:21,0:21:57.09:0,57,1168	0/0:27,0:27:72.10:0,72,1305	0/0:23,0:23:60.05:0,60,961	1/1:2,29:31:36.12:634,36,0	0/1:24,0:24:99:267,0,267	0/1:36,1:36:99:558,0,278	0/1:11,0:11:43.03:43,0,139
chr10	2940907	.	GCT	G	4707.53	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=9.567;DP=606;FS=1.288;HRun=0;HaplotypeScore=78.3734;InbreedingCoeff=0.9670;MQ=97.14;MQ0=2;MQRankSum=-2.719;QD=44.00;ReadPosRankSum=4.304;VQSLOD=6.0868;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:90.31:0,90,1790	0/0:8,0:8:24.08:0,24,487	0/0:30,1:30:84.76:0,85,1680	0/0:41,0:39:73.87:0,74,1782	0/0:27,0:27:81.28:0,81,1620	0/0:19,0:19:57.20:0,57,1145	0/0:24,0:24:72.21:0,72,1372	0/0:31,0:31:93.30:0,93,1822	0/0:21,0:21:63.22:0,63,1268	0/0:22,0:22:66.23:0,66,1327	0/0:20,0:20:60.21:0,60,1200	0/0:29,0:29:87.30:0,87,1767	0/0:27,0:27:81.28:0,81,1622	0/0:16,0:16:48.15:0,48,939	1/1:1,24:25:11.27:1065,11,0	0/0:19,0:19:57.20:0,57,1158	0/0:17,0:17:51.15:0,51,970	1/1:0,12:12:33.11:531,33,0	0/0:27,0:27:81.27:0,81,1612	0/0:25,0:25:75.26:0,75,1520	0/0:15,0:15:39.13:0,39,765	0/0:16,0:16:48.16:0,48,975	0/0:20,0:20:60.21:0,60,1219	0/0:12,0:12:36.12:0,36,732	1/1:0,18:18:48.16:783,48,0	1/1:1,21:22:5.23:957,5,0	1/1:0,18:18:54.18:881,54,0	1/1:2,10:10:30.10:490,30,0
chr10	2941622	.	CGTAT	C	4758.42	PASS	AB=0.970;AC=17;AF=0.304;AN=56;BaseQRankSum=13.862;DP=821;FS=4.919;HRun=0;HaplotypeScore=142.5723;InbreedingCoeff=0.9024;MQ=60.00;MQ0=3;MQRankSum=0.911;QD=21.43;ReadPosRankSum=2.884;VQSLOD=4.6968;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:11,11:22:27.09:439,27,0	0/0:16,0:16:33.11:0,33,791	0/0:31,0:17:11.99:0,12,215	0/0:31,0:12:0.89:0,1,3	0/0:27,1:28:14.43:0,14,1399	0/0:31,0:32:81.28:0,81,1935	0/0:29,0:29:54.17:0,54,1215	0/0:39,0:38:44.15:0,44,578	0/0:33,0:33:66.23:0,66,1584	0/0:29,0:29:66.23:0,66,1532	0/0:28,0:28:72.25:0,72,1695	0/0:35,0:35:78.27:0,78,1813	0/0:42,0:42:84.29:0,84,2018	0/0:32,1:33:35.47:0,35,1849	1/1:17,28:45:66.23:1073,66,0	0/0:34,0:34:78.25:0,78,1831	1/1:5,16:22:42.14:662,42,0	1/1:4,8:12:15.05:244,15,0	0/1:29,1:30:0.26:0,0,817	0/0:28,0:28:63.20:0,63,1479	0/0:41,1:42:23.40:0,23,1512	0/0:28,0:28:66.23:0,66,1600	0/0:30,0:30:17.51:0,18,1457	0/0:31,0:31:66.19:0,66,1492	1/1:6,12:18:10.13:465,10,0	1/1:19,27:47:14.39:1241,14,0	1/1:5,7:12:24.08:390,24,0	1/1:4,8:12:15.05:244,15,0
chr10	2941735	.	A	ACACG	2592.91	PASS	AB=1.000;AC=10;AF=0.179;AN=56;BaseQRankSum=-0.931;DP=676;FS=0.937;HRun=0;HaplotypeScore=127.4078;InbreedingCoeff=0.3252;MQ=59.53;MQ0=16;MQRankSum=-0.336;QD=14.33;ReadPosRankSum=-0.191;VQSLOD=3.3763;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:27:99:105,0,262	0/0:8,0:8:18.49:0,18,238	0/0:24,0:9:6.47:0,6,162	0/0:23,0:7:5.12:0,5,125	0/0:22,0:22:12.86:0,13,519	0/0:26,0:25:68.98:0,69,751	0/0:21,0:21:45.02:0,45,507	0/0:26,0:25:60.17:0,60,504	0/0:26,0:25:66.08:0,66,902	0/0:25,0:24:59.87:0,60,634	0/0:14,0:14:30.01:0,30,375	0/0:30,0:30:74.27:0,74,773	0/0:30,0:30:74.49:0,74,843	0/0:21,0:21:51:0,51,571	0/1:38,0:38:99:321,0,307	0/0:26,0:26:72.12:0,72,993	0/0:24,0:24:33.50:0,34,276	0/1:17,0:17:84.06:84,0,186	0/0:25,0:24:57.91:0,58,568	0/0:24,0:23:47.77:0,48,590	0/0:28,0:24:57.01:0,57,725	0/0:32,0:32:78.33:0,78,872	0/0:13,0:12:27.04:0,27,405	0/0:27,0:27:66.05:0,66,880	0/1:30,0:30:99:224,0,244	1/1:30,1:32:14.63:898,15,0	1/1:7,19:28:1.44:799,1,0	1/1:3,6:9:1.19:304,1,0
chr10	2941893	.	G	GAAAA	6274.35	PASS	AB=0.552;AC=15;AF=0.268;AN=56;BaseQRankSum=-4.874;DP=593;FS=2.905;HRun=8;HaplotypeScore=103.1093;InbreedingCoeff=0.9055;MQ=76.27;MQ0=0;MQRankSum=-3.079;QD=36.27;ReadPosRankSum=-0.361;VQSLOD=3.2463;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:1,0:22:24.92:0,25,65	0/0:12,0:12:36.09:0,36,520	0/0:17,0:17:43.01:0,43,622	0/0:8,0:8:20.86:0,21,280	0/0:34,0:34:84.21:0,84,1269	0/0:26,0:26:72.18:0,72,1024	0/0:13,0:13:33.07:0,33,479	0/1:6,0:31:22.37:22,0,36	0/0:22,0:22:60.20:0,60,906	0/0:25,0:25:69.22:0,69,1023	0/0:24,0:24:60.16:0,60,908	0/0:25,0:25:66.20:0,66,998	0/0:22,0:22:54.15:0,54,816	0/0:23,0:23:60.18:0,60,882	1/1:6,18:26:56:1279,56,0	0/0:23,0:23:66.22:0,66,997	1/1:2,0:23:51.39:327,51,0	1/1:2,9:14:42.13:908,42,0	0/0:28,0:28:69.19:0,69,1040	0/0:36,0:36:96.27:0,96,1443	0/0:17,0:17:45.13:0,45,677	0/0:17,0:17:45.14:0,45,656	0/0:18,0:18:48.14:0,48,726	0/0:8,0:8:21.05:0,21,318	1/1:1,11:13:21.07:479,21,0	1/1:4,18:24:66.22:1488,66,0	1/1:3,22:26:56.83:1346,57,0	1/1:1,11:14:18.06:425,18,0
chr10	2945319	.	TA	T	5357.98	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=20.130;DP=798;FS=7.897;HRun=1;HaplotypeScore=137.7293;InbreedingCoeff=0.9893;MQ=83.97;MQ0=0;MQRankSum=-4.585;QD=25.39;ReadPosRankSum=1.552;VQSLOD=4.2561;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,37:41:99:945,102,0	0/0:14,0:14:42.14:0,42,671	0/0:21,0:21:50.57:0,51,616	0/0:29,0:29:54.63:0,55,963	0/0:29,0:29:87.27:0,87,1342	0/0:24,0:24:72.23:0,72,1122	0/0:36,0:36:99:0,108,1686	1/1:4,17:21:60.11:465,60,0	0/0:35,0:35:99:0,102,1579	0/0:36,0:36:99:0,105,1595	0/0:26,0:26:78.24:0,78,1189	0/0:42,0:42:99:0,126,1990	0/0:34,0:34:99:0,102,1576	0/0:29,0:29:87.28:0,87,1362	1/1:3,35:38:99:1063,114,0	0/0:37,0:37:99:0,111,1675	1/1:4,23:27:74.59:722,75,0	1/1:1,9:10:28.58:272,29,0	0/0:14,0:14:42.14:0,42,667	0/0:31,0:31:93.27:0,93,1415	0/0:56,0:56:99:0,165,2554	0/0:29,0:29:87.27:0,87,1344	0/0:33,0:33:93.29:0,93,1440	0/0:31,1:32:90.09:0,90,1411	1/1:1,19:20:48.17:448,48,0	1/1:1,27:28:83.86:838,84,0	1/1:5,15:19:54.73:488,55,0	1/1:1,5:6:8.32:117,8,0
chr10	2945321	.	T	TGTG	11827.27	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=19.060;DP=814;FS=10.644;HRun=0;HaplotypeScore=156.7102;InbreedingCoeff=0.9987;MQ=82.90;MQ0=0;MQRankSum=-6.143;QD=52.57;ReadPosRankSum=1.349;VQSLOD=6.3969;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,37:44:99:2034,105,0	0/0:14,0:14:42.14:0,42,783	0/0:19,0:19:48.08:0,48,716	0/0:32,0:32:82.98:0,83,1233	0/0:29,0:29:87.30:0,87,1607	0/0:23,0:23:66.23:0,66,1214	0/0:36,0:36:99:0,108,1989	1/1:10,17:28:75.25:1370,75,0	0/0:35,0:35:99:0,102,1886	0/0:37,0:37:99:0,108,1945	0/0:25,0:25:75.26:0,75,1383	0/0:43,0:43:99:0,123,2252	0/0:35,0:35:99:0,102,1886	0/0:29,0:29:87.30:0,87,1615	1/1:0,35:36:99:2107,105,0	0/0:37,0:37:99:0,111,2046	1/1:1,23:26:71.84:1456,72,0	1/1:2,9:12:33.11:669,33,0	0/0:15,0:15:39.13:0,39,727	0/0:31,0:31:93.32:0,93,1730	0/0:56,0:56:99:0,163,2976	0/0:29,0:29:87.30:0,87,1615	0/0:34,0:34:99:0,99,1742	0/0:30,0:30:84.29:0,84,1566	1/1:3,19:23:60.21:1123,60,0	1/1:0,27:30:90.28:1779,90,0	1/1:4,14:19:51.15:980,51,0	1/1:0,5:6:18.04:309,18,0
chr10	2945666	.	TAGTG	T	6379.95	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=13.328;DP=783;FS=0.754;HRun=0;HaplotypeScore=131.9368;InbreedingCoeff=0.9874;MQ=81.85;MQ0=0;MQRankSum=-2.900;QD=47.61;ReadPosRankSum=4.544;VQSLOD=5.3332;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,154,3985	0/0:13,0:13:36.12:0,36,960	0/0:23,0:23:35.54:0,36,1077	0/0:20,0:20:51.17:0,51,1217	0/0:33,0:33:96.31:0,96,2463	0/0:20,0:20:60.21:0,60,1600	0/0:25,0:25:69.22:0,69,1761	0/0:32,0:32:78.26:0,78,2030	0/0:38,0:38:99:0,111,2748	0/0:44,0:44:99:0,120,3158	0/0:25,0:25:75.24:0,75,1922	0/0:31,0:31:93.29:0,93,2371	0/0:34,0:34:99:0,99,2582	0/0:32,0:32:93.28:0,93,2309	1/1:0,30:30:87.30:1624,87,0	0/0:30,0:30:81.27:0,81,2107	0/0:32,0:32:93.27:0,93,2313	1/1:1,13:14:30.10:560,30,0	0/0:21,0:21:54.19:0,54,1421	0/0:30,0:30:84.27:0,84,2158	0/0:31,0:31:87.30:0,87,2320	0/0:26,0:26:72.25:0,72,1913	0/0:30,0:30:81.26:0,81,2067	0/0:27,0:26:75.26:0,75,2000	1/1:0,18:18:45.15:821,45,0	1/1:3,33:36:22.47:1700,22,0	1/1:3,30:33:81.28:1508,81,0	1/1:0,3:3:9.03:168,9,0
chr10	2949290	.	G	GT	2596.48	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=11.297;DP=660;FS=4.735;HRun=0;HaplotypeScore=69.5901;InbreedingCoeff=0.9884;MQ=75.70;MQ0=0;MQRankSum=-2.843;QD=39.34;ReadPosRankSum=-1.895;VQSLOD=3.2543;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,19:20:51.17:802,51,0	0/0:10,0:10:30.10:0,30,420	0/0:18,0:18:54.17:0,54,727	0/0:16,0:16:30.13:0,30,509	0/0:35,0:35:99:0,105,1449	0/0:34,0:34:99:0,99,1367	0/0:29,0:29:87.29:0,87,1215	1/1:2,24:26:72.20:1123,72,0	0/0:31,0:31:93.22:0,93,1226	0/0:34,0:34:99:0,102,1395	0/0:18,0:18:54.15:0,54,720	0/0:22,0:22:66.21:0,66,905	0/0:22,0:22:63.21:0,63,872	0/0:22,0:22:66.21:0,66,905	0/0:23,0:23:69.22:0,69,948	0/0:19,0:19:57.19:0,57,797	1/1:1,19:20:51.17:815,51,0	0/0:11,0:11:27.09:0,27,376	0/0:25,0:25:75.21:0,75,1010	0/0:41,0:41:99:0,123,1702	0/0:29,0:29:84.25:0,84,1137	0/0:28,0:28:81.26:0,81,1115	0/0:30,0:30:87.28:0,87,1201	0/0:14,0:14:42.14:0,42,586	0/0:25,0:25:75.25:0,75,1048	0/0:21,0:21:63.18:0,63,833	0/0:33,0:33:99:0,99,1339	0/0:4,0:4:12.04:0,12,168
chr10	2950470	.	C	CTGTGTGTGTGTG	1683.53	PASS	AB=0.917;AC=16;AF=0.296;AN=54;BaseQRankSum=3.899;DP=547;FS=37.691;HRun=0;HaplotypeScore=191.9113;InbreedingCoeff=0.5188;MQ=49.06;MQ0=7;MQRankSum=-5.156;QD=8.72;ReadPosRankSum=-1.474;VQSLOD=0.8229;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:16,10:30:0:0,0,0	0/0:11,0:11:11.96:0,12,264	./.	0/0:10,0:2:1.38:0,1,16	0/0:28,0:28:2.88:0,3,847	0/1:15,0:15:5.94:6,0,484	0/0:31,0:31:33.31:0,33,1039	0/1:40,0:38:5.77:6,0,235	0/0:20,0:20:22.70:0,23,644	0/0:11,0:16:27.02:0,27,780	0/0:21,0:21:26.45:0,26,783	0/0:26,0:26:38.99:0,39,1264	0/0:22,0:22:10.54:0,11,583	0/0:23,0:23:4.31:0,4,868	1/1:24,0:23:6:116,6,0	0/0:23,0:23:41.09:0,41,1323	1/1:12,0:10:12.51:326,13,0	1/1:8,0:6:11.97:223,12,0	0/0:22,0:21:8.27:0,8,878	0/0:14,0:13:24.01:0,24,643	0/0:25,0:24:24.06:0,24,602	0/0:14,0:14:24.05:0,24,606	0/0:14,0:14:5.10:0,5,205	0/0:30,0:30:50.76:0,51,1488	1/1:17,0:15:3.48:74,3,0	0/1:23,0:23:73.42:780,0,73	1/1:14,0:11:16.48:271,16,0	1/1:8,0:8:3.01:44,3,0
chr10	2950941	.	C	CACAGT	3811.94	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=1.410;DP=606;FS=11.338;HRun=0;HaplotypeScore=121.4087;InbreedingCoeff=0.9925;MQ=76.46;MQ0=0;MQRankSum=-9.236;QD=66.88;ReadPosRankSum=-2.181;VQSLOD=4.0093;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,14:20:39.13:1240,39,0	0/0:8,0:8:21.07:0,21,468	0/0:17,0:17:50.38:0,50,1056	0/0:14,0:14:39.13:0,39,850	0/0:29,0:29:87.30:0,87,1907	0/0:22,0:22:66.21:0,66,1412	0/0:36,0:36:99:0,99,2155	1/1:5,13:21:57.18:1607,57,0	0/0:20,0:20:54.15:0,54,1112	0/0:16,0:16:45.15:0,45,976	0/0:15,0:15:42.14:0,42,900	0/0:21,0:21:54.17:0,54,1122	0/0:16,0:16:45.15:0,45,954	0/0:23,0:23:69.22:0,69,1441	0/0:23,0:23:63.20:0,63,1347	0/0:24,0:24:72.25:0,72,1605	1/1:0,13:14:30.10:965,30,0	0/0:18,0:18:54.19:0,54,1188	0/0:27,0:27:75.24:0,75,1528	0/0:26,0:26:75.26:0,75,1656	0/0:45,0:45:99:0,132,2899	0/0:22,0:22:66.21:0,66,1348	0/0:26,0:26:75.26:0,75,1580	0/0:33,0:33:93.30:0,93,1980	0/0:16,0:16:48.16:0,48,1023	0/0:36,0:36:99:0,105,2239	0/0:11,0:11:30.09:0,30,599	0/0:5,0:5:15.05:0,15,335
chr10	2954365	.	TA	T	3219.26	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=10.722;DP=778;FS=0.853;HRun=3;HaplotypeScore=74.1835;InbreedingCoeff=0.9709;MQ=83.59;MQ0=0;MQRankSum=-1.892;QD=33.53;ReadPosRankSum=2.161;VQSLOD=4.2182;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,111,1643	0/0:8,0:8:24.08:0,24,360	0/0:29,0:29:81.18:0,81,1090	0/0:26,0:26:37.90:0,38,845	0/0:37,0:37:99:0,108,1605	0/0:29,0:29:87.28:0,87,1284	0/0:28,0:28:84.27:0,84,1237	0/0:36,0:36:99:0,105,1555	0/0:24,0:24:72.24:0,72,1079	0/0:27,0:27:78.26:0,78,1153	0/0:24,0:24:69.23:0,69,1034	0/0:36,0:36:99:0,105,1548	0/0:36,0:36:99:0,108,1617	0/0:39,0:39:99:0,114,1687	1/1:0,32:32:90.29:1164,90,0	0/0:38,0:38:99:0,114,1668	1/1:0,22:22:57.19:740,57,0	1/1:0,19:19:51.17:662,51,0	0/0:20,0:20:57.15:0,57,786	0/0:32,0:32:93.31:0,93,1376	0/0:35,0:35:99:0,102,1504	0/0:20,0:20:60.18:0,60,860	0/0:37,0:37:99:0,111,1615	0/0:24,0:24:72.24:0,72,1074	1/1:0,23:23:63.20:814,63,0	0/0:26,0:26:78.26:0,78,1168	0/0:29,0:28:87.29:0,87,1304	0/0:3,0:3:6.02:0,6,90
chr10	2956002	.	AG	A	4524.49	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=7.601;DP=594;FS=2.391;HRun=1;HaplotypeScore=60.1808;InbreedingCoeff=0.9955;MQ=56.87;MQ0=4;MQRankSum=0.570;QD=34.02;ReadPosRankSum=0.150;VQSLOD=4.4837;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,43:43:99:1488,108,0	0/0:5,0:5:15.05:0,15,240	0/0:28,0:17:50.99:0,51,727	0/0:23,0:9:27.09:0,27,431	0/0:13,0:13:39.05:0,39,565	0/0:21,0:21:57.18:0,57,888	0/0:27,0:26:72.24:0,72,1140	1/1:1,27:21:54.18:752,54,0	0/0:16,0:16:42.14:0,42,671	0/0:22,0:21:63.21:0,63,985	0/0:11,0:11:27.02:0,27,401	0/0:21,0:21:57.18:0,57,887	0/0:23,0:23:69.20:0,69,1052	0/0:16,0:16:48.15:0,48,744	1/1:0,21:21:57.19:797,57,0	0/0:16,0:16:48.16:0,48,767	0/0:31,0:31:61.28:0,61,1179	1/1:0,15:15:39.13:545,39,0	0/0:17,0:14:39.11:0,39,578	0/0:13,0:13:36.12:0,36,575	0/0:37,0:37:99:0,99,1519	0/0:15,0:15:45.14:0,45,696	0/0:11,0:10:27.09:0,27,431	0/0:30,0:30:78.27:0,78,1247	1/1:0,26:26:69.19:943,69,0	0/0:22,0:22:66.21:0,66,1032	0/0:23,0:23:69.24:0,69,1103	0/0:20,0:20:60.16:0,60,930
chr10	2956122	.	TACA	T	4061.01	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=11.675;DP=502;FS=2.608;HRun=0;HaplotypeScore=69.1938;InbreedingCoeff=0.9376;MQ=65.74;MQ0=6;MQRankSum=-2.626;QD=39.43;ReadPosRankSum=0.133;VQSLOD=4.5001;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,19:20:48.16:761,48,0	0/0:9,0:9:27.08:0,27,525	0/0:12,0:12:0.64:0,1,609	0/0:8,0:7:14.62:0,15,315	0/0:25,0:25:63.20:0,63,1331	0/0:23,0:21:48.16:0,48,1024	0/0:15,0:15:42.14:0,42,890	1/1:0,17:15:45.14:686,45,0	0/0:5,0:5:15.05:0,15,327	0/0:24,0:23:66.23:0,66,1435	0/0:30,0:30:84.17:0,84,1805	0/0:13,0:12:27.09:0,27,588	0/0:15,0:15:36.12:0,36,780	0/0:11,0:11:27.09:0,27,588	1/1:0,13:13:39.13:618,39,0	0/0:21,0:21:60.21:0,60,1284	0/0:23,0:23:69.23:0,69,1441	1/1:2,18:19:54.18:856,54,0	0/0:22,0:22:57.20:0,57,1217	0/0:33,0:33:93.32:0,93,2024	0/0:15,0:15:42.14:0,42,895	0/0:12,0:11:33.11:0,33,719	0/0:15,0:15:45.15:0,45,979	0/0:13,0:13:36.11:0,36,745	1/1:2,30:31:72.25:1140,72,0	0/0:22,0:22:57.20:0,57,1221	0/0:17,0:17:42.14:0,42,894	0/0:16,0:16:48.16:0,48,1043
chr10	2957274	.	G	GA	4476.48	PASS	AB=0.571;AC=17;AF=0.304;AN=56;BaseQRankSum=3.902;DP=424;FS=20.550;HRun=7;HaplotypeScore=51.6630;InbreedingCoeff=0.9006;MQ=73.41;MQ0=0;MQRankSum=-2.304;QD=29.07;ReadPosRankSum=1.403;VQSLOD=3.1623;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,13:14:39.12:469,39,0	0/0:10,0:10:30.05:0,30,290	0/0:19,0:17:36.03:0,36,340	0/0:25,0:22:27.40:0,27,379	0/0:21,0:21:57.07:0,57,544	0/0:20,0:20:60.10:0,60,579	0/0:12,0:12:33.05:0,33,319	1/1:8,20:28:57.16:677,57,0	0/0:10,0:10:30.05:0,30,290	0/0:15,0:15:39.06:0,39,376	0/0:19,0:19:54.09:0,54,522	0/0:13,0:13:36.06:0,36,348	0/0:11,0:11:30.05:0,30,290	0/0:12,0:12:36.06:0,36,347	1/1:0,16:16:48.15:580,48,0	0/0:12,0:12:36.06:0,36,348	1/1:6,12:17:7.14:364,7,0	1/1:3,17:20:48.15:580,48,0	0/0:20,0:20:48.07:0,48,463	0/0:12,0:12:36.04:0,36,342	0/0:11,0:11:27.02:0,27,255	0/0:6,0:6:18.03:0,18,174	0/0:14,0:14:39.06:0,39,377	0/0:8,0:8:21.03:0,21,203	1/1:2,12:14:39.11:460,39,0	0/1:4,12:16:15.83:393,0,16	1/1:1,19:20:57.17:689,57,0	1/1:2,6:8:24.04:266,24,0
chr10	2957338	.	GAA	G	2207.57	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=9.131;DP=444;FS=8.474;HRun=9;HaplotypeScore=72.3908;InbreedingCoeff=0.9831;MQ=82.75;MQ0=0;MQRankSum=-1.896;QD=24.26;ReadPosRankSum=0.678;VQSLOD=2.6120;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,12:15:30.08:349,30,0	0/0:13,0:13:33.10:0,33,519	0/0:19,0:19:34.31:0,34,469	0/0:15,0:15:8.76:0,9,74	0/0:24,0:24:69.24:0,69,1132	0/0:20,0:20:60.19:0,60,962	0/0:19,0:19:51.17:0,51,837	1/1:6,21:27:63.11:708,63,0	0/0:10,0:10:30.10:0,30,492	0/0:22,0:22:63.20:0,63,970	0/0:15,0:15:42.13:0,42,667	0/0:16,0:16:42.14:0,42,689	0/0:17,0:17:51.17:0,51,837	0/0:7,0:7:21.07:0,21,345	1/1:4,12:16:36.09:419,36,0	0/0:14,0:14:39.13:0,39,640	0/0:20,0:20:56.67:0,57,871	1/1:1,12:13:36.10:417,36,0	0/0:20,0:20:60.19:0,60,937	0/0:17,0:17:45.14:0,45,693	0/0:10,0:11:30.10:0,30,472	0/0:11,0:11:27.09:0,27,443	0/0:15,0:16:41.63:0,42,649	0/0:9,0:9:24.08:0,24,391	1/1:3,17:20:42.11:489,42,0	0/0:3,0:13:30.84:0,31,161	0/0:1,0:13:29.94:0,30,105	0/0:0,0:10:25.43:0,25,100
chr10	2957411	.	GT	G	1344.95	PASS	AB=0.776;AC=8;AF=0.143;AN=56;BaseQRankSum=8.497;DP=425;FS=9.370;HRun=9;HaplotypeScore=49.4443;InbreedingCoeff=0.7361;MQ=71.41;MQ0=0;MQRankSum=-1.779;QD=18.42;ReadPosRankSum=2.090;VQSLOD=3.4725;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,16:16:42.01:384,42,0	0/0:7,0:7:18.05:0,18,207	0/1:11,0:10:0.73:1,0,104	0/0:17,0:16:26.77:0,27,263	0/0:21,0:21:54.15:0,54,615	0/0:18,0:19:50.97:0,51,559	0/0:10,0:10:21.05:0,21,233	0/0:35,0:35:81.21:0,81,909	0/0:13,0:13:36.10:0,36,405	0/0:21,0:21:57.16:0,57,648	0/0:16,0:16:42.11:0,42,474	0/0:12,0:12:27.08:0,27,311	0/0:13,0:13:39.11:0,39,445	0/0:10,0:10:27.08:0,27,311	0/0:20,0:20:51.13:0,51,572	0/0:10,0:10:24.07:0,24,277	0/0:17,0:17:39.12:0,39,450	0/0:16,0:16:44.30:0,44,477	0/0:29,0:29:81.23:0,81,925	0/0:10,0:11:32.93:0,33,361	0/0:8,0:8:21.05:0,21,232	0/0:3,0:3:9.03:0,9,104	0/0:15,0:15:36.11:0,36,415	0/0:6,0:6:15.04:0,15,173	0/0:23,0:23:63.19:0,63,727	0/1:3,13:16:24.21:312,0,24	1/1:1,24:25:72.03:658,72,0	1/1:1,4:5:15.01:137,15,0
chr10	2957541	.	CT	C	2909.13	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=12.665;DP=527;FS=4.383;HRun=7;HaplotypeScore=53.2801;InbreedingCoeff=0.9969;MQ=73.89;MQ0=0;MQRankSum=-1.429;QD=25.30;ReadPosRankSum=1.523;VQSLOD=4.3372;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,26:27:78.11:782,78,0	0/0:12,0:12:36.11:0,36,447	0/0:17,0:16:18.97:0,19,267	0/0:10,0:10:24.04:0,24,275	0/0:34,0:34:93.25:0,93,1129	0/0:19,0:19:54.17:0,54,676	0/0:15,0:15:42.12:0,42,515	1/1:3,23:26:66.12:661,66,0	0/0:16,0:16:45.14:0,45,553	0/0:28,0:28:75.21:0,75,891	0/0:23,0:23:60.18:0,60,742	0/0:12,0:12:33.09:0,33,402	0/0:20,0:20:51.16:0,51,628	0/0:12,0:12:33.08:0,33,379	1/1:0,17:17:48.11:490,48,0	0/0:21,0:21:54.17:0,54,679	0/0:25,0:25:69.20:0,69,841	1/1:5,21:26:59.92:601,60,0	0/0:24,0:24:57.18:0,57,706	0/0:20,0:20:51.12:0,51,608	0/0:16,0:15:45.14:0,45,554	0/0:16,0:17:42.12:0,42,504	0/0:19,0:19:57.18:0,57,702	0/0:8,0:8:24.08:0,24,300	1/1:1,18:19:54.12:550,54,0	0/0:19,0:19:54.17:0,54,666	0/0:17,0:17:51.16:0,51,641	0/0:8,0:8:24.08:0,24,302
chr10	2958472	.	A	AT	6116.84	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-8.894;DP=543;FS=6.959;HRun=2;HaplotypeScore=51.0101;InbreedingCoeff=0.9771;MQ=70.54;MQ0=0;MQRankSum=-3.035;QD=35.98;ReadPosRankSum=-0.535;VQSLOD=4.7780;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,34:31:81.27:1165,81,0	0/0:7,0:7:21.07:0,21,259	0/0:22,0:22:60.18:0,60,732	0/0:24,0:24:63.18:0,63,751	0/0:22,0:22:66.21:0,66,816	0/0:23,0:23:66.19:0,66,804	0/0:24,0:24:66.14:0,66,773	1/1:1,31:31:90.27:1245,90,0	0/0:23,0:23:69.18:0,69,829	0/0:24,0:24:69.20:0,69,832	0/0:13,0:13:36.11:0,36,446	0/0:13,0:13:36.09:0,36,432	0/0:14,0:14:42.09:0,42,503	0/0:16,0:16:45.14:0,45,558	1/1:0,24:20:57.19:819,57,0	0/0:21,0:21:57.17:0,57,695	0/0:26,0:26:69.22:0,69,854	1/1:2,10:12:30.10:432,30,0	0/0:22,0:21:57.15:0,57,682	0/0:12,0:12:36.11:0,36,446	0/0:26,0:26:78.23:0,78,953	0/0:11,0:11:33.10:0,33,406	0/0:9,0:9:24.07:0,24,297	0/0:21,0:21:60.19:0,60,743	1/1:1,18:19:51.17:728,51,0	1/1:3,11:14:4.92:496,5,0	1/1:1,24:25:60.19:844,60,0	1/1:0,9:9:27.09:389,27,0
chr10	2958552	.	A	AT	1139.80	PASS	AB=0.879;AC=21;AF=0.375;AN=56;BaseQRankSum=6.677;DP=509;FS=18.019;HRun=14;HaplotypeScore=74.6263;InbreedingCoeff=0.2401;MQ=57.96;MQ0=0;MQRankSum=-1.491;QD=3.84;ReadPosRankSum=1.441;VQSLOD=-0.1497;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:23,7:25:7.33:179,7,0	0/0:8,0:9:13.68:0,14,81	0/1:18,1:12:14.32:14,0,24	0/0:6,0:5:7.46:0,7,42	0/1:13,3:16:7.39:7,0,70	0/1:15,0:16:3.18:3,0,112	0/1:9,1:10:5.67:6,0,95	0/0:28,1:27:4.99:0,5,152	0/1:14,1:16:4.22:4,0,98	0/0:20,0:21:22.53:0,23,140	0/1:18,3:21:0.01:0,0,125	0/1:18,1:20:12.01:12,0,132	0/1:12,2:14:5.85:6,0,95	0/0:18,0:18:16.76:0,17,128	1/1:20,10:22:7.64:177,8,0	0/0:18,2:20:3.87:0,4,148	0/1:5,2:17:1.91:66,0,2	0/1:7,4:10:33.74:101,0,34	0/0:18,1:20:7.31:0,7,170	0/0:17,0:18:14.67:0,15,84	0/0:24,0:26:41.20:0,41,247	0/0:9,0:9:14.75:0,15,96	0/0:13,0:13:20.31:0,20,126	0/0:21,1:22:5.99:0,6,166	1/1:9,4:10:17.80:134,18,0	1/1:18,0:17:33.39:160,33,0	1/1:33,1:33:55.80:386,56,0	0/1:9,0:7:1.98:54,0,2
chr10	2958555	.	T	TA	1641.46	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=6.639;DP=505;FS=15.660;HRun=0;HaplotypeScore=69.5942;InbreedingCoeff=0.8517;MQ=59.68;MQ0=0;MQRankSum=-0.759;QD=20.26;ReadPosRankSum=6.491;VQSLOD=4.4802;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:26:38.88:0,39,306	0/0:9,0:9:27.04:0,27,298	0/1:19,0:11:3.40:3,0,208	0/0:9,0:7:11.56:0,12,104	0/0:17,0:17:45.46:0,45,442	0/0:16,0:16:44.72:0,45,473	0/0:10,0:10:24.25:0,24,321	0/0:29,0:26:65.07:0,65,686	0/0:15,0:15:38.91:0,39,400	0/0:20,0:20:60.08:0,60,645	0/0:20,0:20:53.80:0,54,545	0/0:21,0:20:51.36:0,51,578	0/0:15,0:15:29.10:0,29,354	0/0:17,0:17:50.83:0,51,525	0/0:30,0:22:26.09:0,26,248	0/0:20,0:20:54.85:0,55,585	0/0:17,0:17:24.47:0,24,174	0/0:11,0:10:10.62:0,11,161	0/0:19,0:19:48.50:0,49,558	0/0:17,0:17:44.99:0,45,430	0/0:27,0:27:69.12:0,69,787	0/0:7,0:7:21.06:0,21,262	0/0:13,0:13:36.06:0,36,408	0/0:21,0:21:57.20:0,57,655	0/0:13,0:9:16.09:0,16,97	1/1:7,12:18:48.05:555,48,0	1/1:10,24:33:88.82:1016,89,0	1/1:4,5:7:17.86:211,18,0
chr10	2958741	.	C	CT	2814.23	PASS	AB=0.854;AC=18;AF=0.321;AN=56;BaseQRankSum=-4.106;DP=400;FS=2.911;HRun=9;HaplotypeScore=44.7455;InbreedingCoeff=0.7774;MQ=56.20;MQ0=34;MQRankSum=-3.894;QD=17.37;ReadPosRankSum=1.724;VQSLOD=3.5203;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:31:59.48:0,59,589	0/0:8,0:8:17.98:0,18,152	0/0:14,0:6:14.72:0,15,97	0/0:11,0:3:5.91:0,6,38	0/0:27,1:25:32.87:0,33,501	0/1:15,2:16:24.30:24,0,270	0/0:4,0:4:7.81:0,8,57	1/1:11,15:16:39.11:431,39,0	0/0:9,0:7:17.99:0,18,154	0/0:19,0:16:35.97:0,36,310	0/1:10,3:13:69.39:69,0,152	0/0:11,0:12:18.44:0,18,246	0/0:5,0:5:10.96:0,11,75	0/0:15,0:15:27.66:0,28,321	1/1:4,10:14:21.06:232,21,0	0/0:9,0:7:14.99:0,15,130	1/1:1,18:19:44.88:497,45,0	1/1:2,10:10:21.06:232,21,0	0/0:23,0:18:17.93:0,18,379	0/0:16,0:17:37.75:0,38,310	0/0:8,0:4:12:0,12,104	0/0:7,0:7:18:0,18,156	0/0:9,0:10:22.81:0,23,188	0/0:5,0:5:14.95:0,15,123	1/1:1,13:14:33.09:365,33,0	1/1:6,12:14:10.08:338,10,0	1/1:1,13:14:36.10:398,36,0	1/1:2,13:14:39.11:431,39,0
chr10	2959287	.	GTA	G	88.73	PASS	AC=10;AF=0.385;AN=26;BaseQRankSum=1.183;DP=285;FS=5.563;HRun=0;HaplotypeScore=12.0198;InbreedingCoeff=0.4112;MQ=10.22;MQ0=248;MQRankSum=-0.394;QD=1.10;ReadPosRankSum=-1.380;VQSLOD=0.1046;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	0/0:4,0:3:6.02:0,6,100	./.	./.	0/0:11,0:2:3.01:0,3,50	0/0:14,0:4:6.02:0,6,100	./.	./.	./.	0/0:7,0:4:6.02:0,6,91	0/0:7,0:2:3.01:0,3,50	./.	./.	./.	1/1:6,1:1:3.01:38,3,0	./.	1/1:36,1:1:3.01:38,3,0	0/0:30,1:2:3:0,3,26	./.	0/0:8,0:3:6.02:0,6,100	./.	./.	0/0:5,0:3:6.02:0,6,100	./.	1/1:4,1:1:3.01:38,3,0	1/1:11,1:1:3.01:38,3,0	./.	1/1:18,2:2:3.01:38,3,0
chr10	2959418	.	TA	T	274.91	PASS	AB=0.760;AC=4;AF=0.077;AN=52;BaseQRankSum=2.051;DP=403;FS=0.000;HRun=11;HaplotypeScore=46.0933;InbreedingCoeff=0.4575;MQ=32.15;MQ0=96;MQRankSum=-0.942;QD=7.23;ReadPosRankSum=0.546;VQSLOD=1.1200;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:18:41.93:0,42,394	0/0:6,0:5:9.02:0,9,96	./.	./.	0/0:14,0:14:22.30:0,22,227	0/0:24,0:21:51.09:0,51,529	0/0:13,0:11:17.88:0,18,233	0/0:37,0:25:66.03:0,66,663	0/0:10,0:10:21.03:0,21,213	0/0:21,0:20:36.08:0,36,379	0/0:13,0:9:23.85:0,24,204	0/0:7,0:6:11.88:0,12,89	0/0:9,0:8:20.99:0,21,203	0/0:9,0:8:20.36:0,20,179	0/0:18,0:16:41.94:0,42,400	0/0:7,0:7:12.03:0,12,128	0/0:25,0:9:17.38:0,17,107	0/0:26,1:18:17.24:0,17,338	0/0:16,0:11:27.04:0,27,276	0/0:23,0:18:29.90:0,30,279	0/0:10,0:7:18.05:0,18,192	0/0:9,0:6:12:0,12,117	0/0:11,1:12:14.27:0,14,276	0/0:12,0:10:21.05:0,21,224	0/0:9,0:8:20.77:0,21,173	0/1:4,7:9:7.99:148,0,8	1/1:6,11:16:26.95:221,27,0	0/1:9,1:4:15.56:19,0,16
chr10	2959925	.	G	GTGTATGTA	1949.19	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-5.219;DP=444;FS=0.870;HRun=0;HaplotypeScore=107.9439;InbreedingCoeff=0.8718;MQ=57.48;MQ0=2;MQRankSum=-2.694;QD=24.99;ReadPosRankSum=-2.294;VQSLOD=2.6727;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:23:6.36:131,6,0	0/0:3,0:3:6.02:0,6,112	0/0:20,0:12:18.05:0,18,327	0/0:17,0:14:15.01:0,15,240	0/0:25,0:25:63.20:0,63,1548	0/0:20,0:20:54.19:0,54,1314	0/0:8,0:8:24.08:0,24,577	1/1:30,0:30:42.50:593,42,0	0/0:9,0:9:15.05:0,15,349	0/0:18,0:18:45.15:0,45,1149	0/0:21,0:21:42.14:0,42,1012	0/0:9,0:9:27.09:0,27,660	0/0:10,0:10:21.07:0,21,541	0/0:7,0:7:18.06:0,18,430	1/1:1,7:9:9.03:374,9,0	0/0:6,0:6:15.05:0,15,386	0/0:22,0:22:39.13:0,39,922	0/0:7,4:12:5.05:0,5,19	0/0:18,0:17:36.12:0,36,796	0/0:17,0:17:39.13:0,39,975	0/0:12,0:12:27.09:0,27,647	0/0:10,0:10:15.05:0,15,386	0/0:16,0:16:42.14:0,42,991	0/0:19,0:19:33.10:0,33,797	1/1:4,12:16:24.08:999,24,0	0/0:15,0:15:39.13:0,39,867	0/0:29,0:29:78.27:0,78,1950	0/0:22,0:22:51.16:0,51,1257
chr10	2960515	.	TA	T	1262.08	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=5.070;DP=512;FS=1.067;HRun=10;HaplotypeScore=81.5330;InbreedingCoeff=0.8010;MQ=64.30;MQ0=1;MQRankSum=-0.073;QD=15.98;ReadPosRankSum=1.683;VQSLOD=4.1872;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:49.87:0,50,256	0/0:8,0:8:15.03:0,15,157	0/0:15,1:11:6.66:0,7,249	0/1:11,0:8:7.15:7,0,89	0/0:31,1:32:57.91:0,58,816	0/0:19,0:19:48.11:0,48,515	0/0:18,0:20:35.92:0,36,371	0/0:34,0:33:64.12:0,64,263	0/0:19,0:19:45.12:0,45,498	0/0:29,0:29:78.18:0,78,833	0/0:27,0:27:67.06:0,67,724	0/0:8,0:8:18.04:0,18,192	0/0:16,0:16:40.34:0,40,426	0/0:15,0:15:37.33:0,37,395	1/1:1,12:13:32.98:286,33,0	0/0:9,0:9:1.08:0,1,240	1/1:5,10:15:18.71:223,19,0	1/1:3,17:20:50.95:437,51,0	0/0:12,0:12:33.09:0,33,365	0/0:25,0:25:66.16:0,66,711	0/0:7,0:7:12.03:0,12,133	0/0:13,0:13:36.10:0,36,397	0/0:20,0:20:48.12:0,48,524	0/0:10,0:10:27.06:0,27,291	1/1:2,18:20:53.98:469,54,0	0/0:20,0:20:53.86:0,54,229	0/0:23,0:23:53.57:0,54,221	0/0:18,0:18:37.50:0,37,155
chr10	2960520	.	A	AC	4435.26	PASS	AB=0.923;AC=11;AF=0.196;AN=56;BaseQRankSum=4.770;DP=517;FS=1.250;HRun=0;HaplotypeScore=78.0705;InbreedingCoeff=0.9023;MQ=65.47;MQ0=1;MQRankSum=-0.641;QD=30.38;ReadPosRankSum=1.579;VQSLOD=4.8928;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,33:36:38.44:938,38,0	0/0:6,0:6:18.04:0,18,221	0/0:21,0:16:43.48:0,43,423	0/1:11,1:9:6.43:6,0,142	0/0:31,0:31:93.19:0,93,1161	0/0:18,0:18:54.14:0,54,692	0/0:18,0:18:42.63:0,43,543	1/1:3,32:34:84.73:1161,85,0	0/0:20,0:20:57.14:0,57,730	0/0:27,0:27:81.23:0,81,1049	0/0:29,0:29:77.70:0,78,997	0/0:8,0:8:23.25:0,23,264	0/0:15,0:15:43.34:0,43,544	0/0:14,0:14:40.94:0,41,534	0/0:13,0:13:35.52:0,36,241	0/0:9,0:9:27.04:0,27,355	0/0:15,0:15:36.77:0,37,241	0/0:23,0:23:65.15:0,65,437	0/0:13,0:13:36.12:0,36,490	0/0:25,0:25:75.21:0,75,973	0/0:6,0:6:18.03:0,18,218	0/0:12,0:12:36.12:0,36,502	0/0:18,0:18:54.16:0,54,708	0/0:10,0:10:28.63:0,29,364	0/0:20,0:20:59.20:0,59,399	1/1:1,24:25:72.12:910,72,0	1/1:0,22:22:60.20:836,60,0	1/1:0,16:16:42.14:584,42,0
chr10	2961154	.	A	AG	7133.85	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-15.979;DP=655;FS=3.851;HRun=2;HaplotypeScore=58.6135;InbreedingCoeff=0.9817;MQ=85.36;MQ0=0;MQRankSum=-2.303;QD=38.15;ReadPosRankSum=1.633;VQSLOD=5.5380;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,38:39:99:1590,111,0	0/0:14,0:14:42.13:0,42,520	0/0:19,0:19:54.17:0,54,666	0/0:21,0:21:56.53:0,57,654	0/0:21,0:21:60.19:0,60,742	0/0:31,0:30:90.25:0,90,1098	0/0:15,0:15:45.14:0,45,558	1/1:0,25:25:75.24:1061,75,0	0/0:28,0:28:78.22:0,78,941	0/0:28,0:28:81.25:0,81,1005	0/0:24,0:24:66.21:0,66,818	0/0:18,0:18:51.16:0,51,632	0/0:18,0:18:54.17:0,54,669	0/0:34,0:34:96.30:0,96,1190	1/1:2,29:31:81.27:1166,81,0	0/0:16,0:16:48.15:0,48,595	0/0:30,0:30:90.28:0,90,1116	1/1:2,12:14:21.07:302,21,0	0/0:17,0:17:48.14:0,48,583	0/0:28,0:28:81.25:0,81,1004	0/0:26,0:26:75.24:0,75,929	0/0:26,0:26:69.22:0,69,855	0/0:24,0:24:63.20:0,63,777	0/0:30,0:30:90.27:0,90,1102	1/1:1,18:19:39.13:562,39,0	1/1:1,32:33:93.31:1330,93,0	1/1:0,24:24:72.24:1037,72,0	1/1:0,2:2:6.02:86,6,0
chr10	2961738	.	G	GT	7221.97	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-7.609;DP=690;FS=6.201;HRun=4;HaplotypeScore=65.9620;InbreedingCoeff=0.9994;MQ=82.69;MQ0=0;MQRankSum=-11.482;QD=37.04;ReadPosRankSum=1.519;VQSLOD=5.1249;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,32:35:78.26:1066,78,0	0/0:10,0:10:30.07:0,30,331	0/0:22,0:22:57.16:0,57,641	0/0:21,0:21:48.08:0,48,525	0/0:18,0:18:51.14:0,51,578	0/0:36,0:36:96.27:0,96,1086	0/0:31,0:31:93.23:0,93,1035	1/1:0,25:25:72.23:962,72,0	0/0:37,0:37:99:0,111,1258	0/0:34,0:34:99:0,99,1104	0/0:22,0:22:66.19:0,66,748	0/0:22,0:22:60.17:0,60,681	0/0:18,0:18:54.15:0,54,612	0/0:18,0:18:54.15:0,54,611	1/1:1,24:25:69.23:943,69,0	0/0:26,0:26:75.21:0,75,851	0/0:29,0:29:78.21:0,78,874	1/1:0,30:28:84.28:1149,84,0	0/0:17,0:17:45.12:0,45,501	0/0:27,0:27:78.22:0,78,885	0/0:21,0:21:57.16:0,57,647	0/0:22,0:22:57.15:0,57,637	0/0:24,0:24:72.17:0,72,797	0/0:40,0:40:99:0,102,1157	1/1:2,10:12:24.08:323,24,0	1/1:1,32:33:99:1350,99,0	1/1:0,26:25:78.26:1061,78,0	1/1:0,9:9:27.09:369,27,0
chr10	2961999	.	GC	G	1854.34	PASS	AB=0.540;AC=5;AF=0.089;AN=56;BaseQRankSum=8.699;DP=665;FS=18.212;HRun=2;HaplotypeScore=63.6388;InbreedingCoeff=0.7644;MQ=74.74;MQ0=0;MQRankSum=-0.051;QD=31.97;ReadPosRankSum=1.150;VQSLOD=1.9129;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,138,2048	0/0:11,0:11:30.10:0,30,450	0/0:15,0:15:40.64:0,41,552	0/0:11,0:11:27.02:0,27,343	0/0:19,0:19:57.19:0,57,852	0/0:28,0:28:84.28:0,84,1255	0/0:25,0:25:72.23:0,72,1059	0/0:24,0:24:72.24:0,72,1078	0/0:23,0:23:69.23:0,69,1034	0/0:24,0:24:66.22:0,66,988	0/0:23,0:23:66.21:0,66,968	0/0:28,0:28:81.27:0,81,1214	0/0:34,0:34:99:0,102,1527	0/0:18,0:18:54.18:0,54,809	0/0:22,0:22:63.20:0,63,922	0/0:29,0:29:87.29:0,87,1304	0/0:30,0:30:90.30:0,90,1345	0/0:18,0:18:54.18:0,54,808	0/0:25,0:25:75.24:0,75,1103	0/0:27,0:27:81.27:0,81,1210	0/0:38,0:38:99:0,108,1619	0/0:21,0:21:60.19:0,60,879	0/0:27,0:27:78.25:0,78,1132	0/0:21,0:21:63.21:0,63,944	0/0:20,0:20:57.15:0,57,828	0/1:4,23:27:97.31:811,0,97	1/1:0,27:27:78.25:1013,78,0	1/1:0,4:4:12.04:156,12,0
chr10	2962770	.	T	TA	1119.27	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-7.155;DP=675;FS=0.721;HRun=1;HaplotypeScore=63.5072;InbreedingCoeff=0.9616;MQ=76.83;MQ0=0;MQRankSum=-3.966;QD=38.60;ReadPosRankSum=0.599;VQSLOD=4.1059;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,156,1963	0/0:4,0:4:12.04:0,12,156	0/0:18,0:18:37.68:0,38,528	0/0:20,0:20:46.39:0,46,578	0/0:24,0:24:69.22:0,69,894	0/0:16,0:16:45.15:0,45,583	0/0:36,0:36:99:0,108,1388	0/0:23,0:23:66.21:0,66,857	0/0:28,0:28:84.26:0,84,1076	0/0:36,0:36:99:0,105,1350	0/0:13,0:13:36.12:0,36,468	0/0:25,0:25:75.22:0,75,949	0/0:31,0:31:93.28:0,93,1185	0/0:20,0:20:60.20:0,60,779	0/0:35,0:35:99:0,105,1334	0/0:23,0:23:66.20:0,66,842	1/1:0,29:29:81.27:1214,81,0	0/0:19,0:19:54.18:0,54,701	0/0:20,0:20:57.18:0,57,739	0/0:10,0:10:27.09:0,27,351	0/0:49,0:49:99:0,141,1814	0/0:22,0:22:66.20:0,66,842	0/0:16,0:16:42.14:0,42,545	0/0:33,0:33:96.31:0,96,1246	0/0:15,0:15:42.14:0,42,545	0/0:23,0:23:66.21:0,66,857	0/0:28,0:28:84.25:0,84,1074	0/0:6,0:6:18.05:0,18,219
chr10	2964146	.	AACACAC	A	1254.40	PASS	AB=0.818;AC=5;AF=0.089;AN=56;BaseQRankSum=5.033;DP=646;FS=12.024;HRun=0;HaplotypeScore=145.0639;InbreedingCoeff=0.6732;MQ=57.58;MQ0=7;MQRankSum=-7.335;QD=26.69;ReadPosRankSum=0.201;VQSLOD=2.6330;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:35:6.02:0,6,149	0/0:10,0:10:21.07:0,21,676	0/0:31,0:21:32.59:0,33,620	0/0:27,0:19:21.07:0,21,568	0/0:20,0:23:60.17:0,60,1581	0/0:15,0:15:36.02:0,36,871	0/0:24,0:25:60.21:0,60,1833	0/0:31,0:29:50.82:0,51,989	0/0:25,0:25:57.20:0,57,1690	0/0:25,0:25:63.22:0,63,1761	0/0:20,0:21:39.12:0,39,1036	0/0:19,0:20:45.15:0,45,1399	0/0:22,0:23:45.15:0,45,1211	0/0:22,0:24:47.36:0,47,1380	1/1:7,20:27:48.03:863,48,0	0/0:24,0:25:66.23:0,66,1986	0/0:14,0:13:3.43:0,3,25	0/1:7,2:9:67.66:138,0,68	0/0:21,0:20:33.11:0,33,1066	0/0:31,0:33:72.21:0,72,1954	0/0:45,0:45:99:0,105,3309	0/0:29,0:32:72.23:0,72,2082	0/0:22,0:22:45.15:0,45,1365	0/0:20,0:22:51.17:0,51,1559	1/1:5,6:11:18.06:381,18,0	0/0:16,0:22:48.15:0,48,1062	0/0:11,0:23:57.16:0,57,1360	0/0:0,0:4:9.03:0,9,237
chr10	2964222	.	G	GGAGA	1372.54	PASS	AB=1.000;AC=10;AF=0.179;AN=56;BaseQRankSum=1.168;DP=582;FS=5.203;HRun=0;HaplotypeScore=113.1712;InbreedingCoeff=0.7331;MQ=63.68;MQ0=26;MQRankSum=-0.792;QD=10.09;ReadPosRankSum=-0.432;VQSLOD=2.0066;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:26:99:167,0,174	0/0:4,0:4:6.01:0,6,77	0/1:30,0:11:2.85:3,0,15	0/0:35,0:18:9.77:0,10,143	0/0:20,0:19:22.90:0,23,386	0/0:18,0:16:44.94:0,45,475	0/0:22,0:22:56.96:0,57,507	1/1:30,0:20:35.77:285,36,0	0/0:19,0:19:54:0,54,604	0/0:22,0:22:60.04:0,60,591	0/0:14,0:14:35.93:0,36,410	0/0:20,0:20:53.96:0,54,528	0/0:23,0:23:62.24:0,62,719	0/0:21,0:21:57.07:0,57,718	1/1:23,1:24:32.54:302,33,0	0/0:26,0:25:62.95:0,63,644	0/0:17,0:17:50.94:0,51,474	1/1:0,8:8:6.02:148,6,0	0/0:14,0:11:30.04:0,30,342	0/0:23,0:22:56.93:0,57,544	0/0:46,0:45:99:0,105,1094	0/0:19,0:18:42:0,42,477	0/0:20,0:18:40.89:0,41,429	0/0:12,0:11:27.04:0,27,362	1/1:12,5:17:40.82:627,41,0	0/0:18,0:18:42.34:0,42,377	0/0:25,0:24:41.64:0,42,391	0/0:8,0:8:20.65:0,21,153
chr10	2964231	.	GAGACAGACAGAC	G	1946.23	PASS	AC=6;AF=0.115;AN=52;BaseQRankSum=6.283;DP=588;FS=7.171;HRun=0;HaplotypeScore=193.7730;InbreedingCoeff=0.8936;MQ=58.18;MQ0=28;MQRankSum=-4.294;QD=36.72;ReadPosRankSum=-0.112;VQSLOD=2.3768;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:32:51.12:0,51,2020	0/0:3,0:3:6.02:0,6,333	./.	./.	0/0:18,0:17:33.11:0,33,1746	0/0:20,0:18:30.08:0,30,1411	0/0:24,0:24:48.14:0,48,2248	0/0:26,0:15:9.03:0,9,294	0/0:21,0:21:42.14:0,42,2137	0/0:25,0:25:51.18:0,51,2316	0/0:14,0:14:33.11:0,33,1513	0/0:20,0:20:42.12:0,42,2009	0/0:23,0:23:48.15:0,48,2332	0/0:20,0:20:51.18:0,51,2791	0/0:24,0:24:25.33:0,25,1053	0/0:23,0:22:45.10:0,45,2138	0/0:15,0:20:45.15:0,45,1113	0/0:10,0:10:12.04:0,12,538	0/0:18,0:15:39.13:0,39,1536	0/0:23,0:22:30.10:0,30,1521	0/0:47,0:47:96.29:0,96,4347	0/0:18,0:17:36.12:0,36,1831	0/0:21,0:19:36.12:0,36,1764	0/0:13,0:12:30.10:0,30,1602	0/0:17,0:17:42.14:0,42,1941	1/1:8,11:19:30.07:806,30,0	1/1:10,15:24:32.48:1112,32,0	1/1:8,1:9:6.02:161,6,0
chr10	2965301	.	CTCTCTCTCTT	C	2706.91	PASS	AB=0.559;AC=15;AF=0.268;AN=56;BaseQRankSum=9.496;DP=590;FS=20.607;HRun=0;HaplotypeScore=181.7231;InbreedingCoeff=0.8565;MQ=74.45;MQ0=3;MQRankSum=-2.711;QD=18.80;ReadPosRankSum=-2.658;VQSLOD=0.9551;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:4.30:0,4,16	0/0:5,0:5:11.88:0,12,305	0/0:34,0:29:69.07:0,69,1089	0/0:39,0:26:36.74:0,37,663	0/0:21,0:21:48.16:0,48,1254	0/0:29,0:28:51.84:0,52,1295	0/0:16,0:16:24.95:0,25,566	1/1:40,0:40:64.30:412,64,0	0/0:28,0:28:76.11:0,76,1997	0/0:25,0:25:60.20:0,60,1612	0/0:16,0:16:42.14:0,42,1082	0/0:22,0:21:55.11:0,55,1231	0/0:7,0:7:21.07:0,21,574	0/0:17,0:17:36.44:0,36,998	1/1:14,0:14:8.99:75,9,0	0/0:21,0:21:48.63:0,49,1126	1/1:14,0:13:29.10:504,29,0	1/1:10,0:10:20.29:150,20,0	0/0:20,0:20:45.14:0,45,1034	0/0:13,0:13:19.38:0,19,587	0/0:30,0:30:63.13:0,63,1408	0/0:19,0:19:39.59:0,40,944	0/0:18,0:18:33.55:0,34,644	0/0:38,0:38:48.94:0,49,1724	1/1:16,0:14:9.20:76,9,0	0/1:4,15:19:33.34:677,0,33	1/1:14,0:14:27:405,27,0	1/1:15,2:17:24.08:604,24,0
chr10	2965303	.	CTCTCTCTT	C	2460.28	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=10.825;DP=582;FS=19.984;HRun=0;HaplotypeScore=160.8492;InbreedingCoeff=0.8537;MQ=71.93;MQ0=3;MQRankSum=-4.106;QD=15.09;ReadPosRankSum=-3.043;VQSLOD=1.1221;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:7,19:25:1.05:15,1,0	0/0:5,0:5:11.88:0,12,267	0/0:32,0:27:69.09:0,69,1219	0/0:37,0:24:37.85:0,38,716	0/0:22,0:22:49.41:0,49,1236	0/0:28,0:27:51.48:0,51,1244	0/0:17,0:17:24.06:0,24,557	1/1:9,28:37:81.94:1265,82,0	0/0:29,0:29:76.10:0,76,1910	0/0:25,0:25:60.19:0,60,1515	0/0:17,0:17:45.06:0,45,1067	0/0:21,0:20:55.11:0,55,1203	0/0:8,0:8:21.07:0,21,520	0/0:16,0:16:36.52:0,37,943	1/1:13,0:13:8.99:75,9,0	0/0:23,0:23:42.56:0,43,1070	1/1:13,0:12:28.59:227,29,0	1/1:10,0:10:20.27:147,20,0	0/0:20,0:20:45.13:0,45,1020	0/0:14,0:14:30.52:0,31,598	0/0:29,0:29:63.12:0,63,1381	0/0:19,0:19:39.59:0,40,940	0/0:19,0:19:34.43:0,34,645	0/0:38,0:37:47.94:0,48,1645	1/1:16,0:14:11.69:104,12,0	0/1:19,0:19:38.95:299,0,39	1/1:12,0:12:26.52:187,27,0	1/1:17,0:17:24.07:340,24,0
chr10	2965325	.	TTCTCTC	T	165.52	PASS	AB=0.988;AC=7;AF=0.152;AN=46;BaseQRankSum=3.078;DP=545;FS=19.932;HRun=0;HaplotypeScore=140.6368;InbreedingCoeff=0.1619;MQ=53.51;MQ0=27;MQRankSum=-2.768;QD=1.67;ReadPosRankSum=-0.021;VQSLOD=1.2126;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:22:0:0,0,0	0/1:10,0:10:13.41:19,0,13	./.	./.	0/0:23,0:22:2.99:0,3,23	0/1:24,0:23:3.69:4,0,88	0/0:11,0:9:3.01:0,3,50	0/0:29,0:28:8.22:0,8,39	0/0:28,0:28:12.91:0,13,226	0/0:20,0:20:8.32:0,8,251	0/0:21,0:21:3.01:0,3,75	0/0:21,0:20:6:0,6,127	0/0:11,0:11:6.59:0,7,37	0/0:22,0:21:6.96:0,7,139	./.	0/0:13,5:18:2.74:0,3,12	0/0:18,0:15:12.29:0,12,76	./.	0/0:16,0:16:8.95:0,9,69	0/0:16,0:16:2.29:0,2,7	0/0:24,0:22:8.62:0,9,155	0/0:20,0:20:2.44:0,2,25	0/0:17,0:17:0:0,0,0	0/0:38,0:35:13.11:0,13,301	./.	0/1:25,0:23:46.91:110,0,47	1/1:17,0:15:1.71:4,2,0	1/1:20,0:21:4.61:130,5,0
chr10	2965372	.	TCACACACACACACA	T	137.30	PASS	AB=0.784;AC=4;AF=0.074;AN=54;BaseQRankSum=2.810;DP=475;FS=2.700;HRun=0;HaplotypeScore=149.2484;InbreedingCoeff=0.4238;MQ=41.09;MQ0=49;MQRankSum=-2.712;QD=3.35;ReadPosRankSum=0.168;VQSLOD=2.7823;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:21:15.52:0,16,820	0/0:10,0:9:11.66:0,12,516	./.	0/0:5,0:1:3.01:0,3,160	0/0:18,0:15:15.05:0,15,821	0/0:27,0:25:30.36:0,30,1734	0/0:20,0:16:23.96:0,24,1282	0/0:18,0:17:18.06:0,18,795	0/0:23,0:22:33.58:0,34,1857	0/0:18,0:15:21.07:0,21,997	0/0:19,0:18:23.62:0,24,1184	0/0:11,0:10:8.24:0,8,290	0/0:12,0:12:18.53:0,19,949	0/0:22,0:21:39.12:0,39,1901	1/1:6,9:13:4.25:118,4,0	0/0:18,0:16:24.08:0,24,1397	0/0:15,0:11:18.06:0,18,908	0/1:10,1:7:58.54:111,0,59	0/0:8,0:8:18.06:0,18,861	0/0:16,0:15:24.08:0,24,1292	0/0:25,0:21:35.78:0,36,1927	0/0:19,0:17:24.12:0,24,1233	0/0:17,0:16:12.04:0,12,742	0/0:31,0:28:24.20:0,24,1324	0/1:7,7:12:0:0,0,0	0/0:20,0:15:36.12:0,36,1494	0/0:21,0:19:44.75:0,45,2027	0/0:11,0:11:14.98:0,15,611
chr10	2965534	.	AAGGTTTAGTGTGT	A	9550.91	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=13.587;DP=534;FS=4.033;HRun=0;HaplotypeScore=198.1102;InbreedingCoeff=0.9787;MQ=89.81;MQ0=0;MQRankSum=-12.728;QD=76.41;ReadPosRankSum=1.672;VQSLOD=4.7633;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,24:27:54.19:2041,54,0	0/0:11,0:11:33.11:0,33,2148	0/0:30,0:30:81.28:0,81,4293	0/0:17,0:17:39.09:0,39,2237	0/0:25,0:25:63.22:0,63,3633	0/0:24,0:24:60.18:0,60,3450	0/0:19,0:19:54.19:0,54,3318	1/1:10,18:28:51.15:1681,51,0	0/0:22,0:22:60.19:0,60,3630	0/0:37,0:37:99:0,105,6327	0/0:16,0:16:45.15:0,45,2894	0/0:14,0:14:36.12:0,36,2154	0/0:12,0:12:30.09:0,30,1645	0/0:17,0:17:48.16:0,48,3109	1/1:3,9:12:18.06:704,18,0	0/0:23,0:23:63.17:0,63,3773	0/0:19,0:19:48.16:0,48,3035	1/1:1,3:4:9.03:349,9,0	0/0:17,0:17:45.15:0,45,2536	0/0:23,0:23:63.22:0,63,3877	0/0:15,0:15:30.10:0,30,1947	0/0:27,0:27:81.28:0,81,5106	0/0:18,0:18:42.14:0,42,2655	0/0:23,0:22:66.23:0,66,4262	1/1:4,14:18:36.12:1409,36,0	1/1:2,13:15:39.12:1384,39,0	1/1:2,16:18:42.14:1636,42,0	1/1:0,3:3:9.03:346,9,0
chr10	2969811	.	GACAC	G	1901.23	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.952;DP=774;FS=1.977;HRun=0;HaplotypeScore=145.7672;InbreedingCoeff=0.9985;MQ=62.27;MQ0=5;MQRankSum=-6.620;QD=33.35;ReadPosRankSum=-0.005;VQSLOD=3.8837;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:83.84:0,84,2103	0/0:19,0:19:51.16:0,51,1243	0/0:44,0:29:71.98:0,72,1322	0/0:45,0:36:37.39:0,37,1180	0/0:22,0:22:66.23:0,66,1646	0/0:26,0:26:59.78:0,60,1403	0/0:23,0:23:66.23:0,66,1675	0/0:35,0:32:76.59:0,77,1592	0/0:27,0:27:72.25:0,72,1790	0/0:30,0:30:87.29:0,87,2026	0/0:26,0:26:66.19:0,66,1486	0/0:25,0:25:69.24:0,69,1674	0/0:16,0:16:45.14:0,45,1035	0/0:23,0:23:66.23:0,66,1661	1/1:2,26:28:57.20:987,57,0	0/0:18,0:18:51.16:0,51,1243	0/0:30,0:30:81.82:0,82,2104	1/1:3,7:9:21.03:332,21,0	0/0:19,0:20:50.92:0,51,1007	0/0:30,0:30:81.28:0,81,1946	0/0:57,0:57:99:0,150,3503	0/0:20,0:21:53.94:0,54,1126	0/0:29,0:28:81.28:0,81,2040	0/0:44,1:46:69.31:0,69,2820	1/1:0,19:19:42.14:725,42,0	0/0:19,0:20:56.98:0,57,1252	0/0:30,0:29:84.29:0,84,2046	0/0:21,0:21:60.21:0,60,1438
chr10	2969839	.	T	TAC	1378.18	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.025;DP=774;FS=19.222;HRun=0;HaplotypeScore=124.3368;InbreedingCoeff=0.9937;MQ=60.10;MQ0=3;MQRankSum=-1.810;QD=30.63;ReadPosRankSum=-4.312;VQSLOD=2.5090;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:93.26:0,93,1166	0/0:20,0:20:51.10:0,51,620	0/0:46,0:33:80.67:0,81,960	0/0:35,0:23:25.08:0,25,405	0/0:21,0:21:54.16:0,54,681	0/0:21,0:21:47.42:0,47,738	0/0:26,0:26:69.21:0,69,873	1/1:12,33:42:96.28:1473,96,0	0/0:28,0:28:66.20:0,66,833	0/0:26,0:28:60.02:0,60,743	0/0:17,0:17:42.14:0,42,540	0/0:28,0:28:84.20:0,84,1057	0/0:12,0:12:33.09:0,33,410	0/0:21,0:21:48.16:0,48,616	0/0:26,0:26:51.15:0,51,639	0/0:13,0:13:36.06:0,36,408	0/0:30,0:30:81.22:0,81,1010	0/0:9,0:9:20.92:0,21,228	0/0:29,0:29:63.20:0,63,809	0/0:27,0:27:63.20:0,63,807	0/0:65,0:65:99:0,181,2310	0/0:22,0:22:60.19:0,60,771	0/0:31,0:30:63.19:0,63,794	0/0:46,0:46:99:0,120,1527	0/0:25,0:25:42.05:0,42,467	0/0:22,0:22:51.16:0,51,656	0/0:28,0:27:63.19:0,63,796	0/0:17,0:17:39.13:0,39,501
chr10	2970190	.	A	AT	2195.29	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-10.101;DP=594;FS=1.735;HRun=4;HaplotypeScore=53.5601;InbreedingCoeff=0.9852;MQ=81.32;MQ0=0;MQRankSum=-1.091;QD=35.99;ReadPosRankSum=3.988;VQSLOD=3.8788;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:81.10:0,81,877	0/0:6,0:6:18.05:0,18,204	0/0:19,0:19:36.02:0,36,396	0/0:20,0:20:24.17:0,24,449	0/0:31,0:31:84.22:0,84,941	0/0:26,0:26:75.18:0,75,831	0/0:19,0:19:48.12:0,48,534	0/0:46,0:46:99:0,126,1390	0/0:19,0:19:48.12:0,48,534	0/0:31,0:31:93.26:0,93,1043	0/0:20,0:20:57.16:0,57,645	0/0:15,0:15:42.12:0,42,476	0/0:10,0:10:30.09:0,30,340	0/0:19,0:19:57.13:0,57,626	0/0:23,0:23:66.17:0,66,739	0/0:12,0:12:33.09:0,33,374	0/0:24,0:24:66.17:0,66,738	0/0:18,0:18:48.09:0,48,520	0/0:19,0:19:48.13:0,48,543	0/0:30,0:30:87.21:0,87,960	0/0:21,0:21:54.07:0,54,568	0/0:19,0:19:57.16:0,57,646	0/0:35,0:35:99:0,102,1127	0/0:5,0:5:12.03:0,12,136	0/0:18,0:18:51.15:0,51,577	1/1:0,21:21:63.21:861,63,0	1/1:1,24:25:63.21:862,63,0	1/1:0,15:15:45.15:615,45,0
chr10	2970568	.	CTATGA	C	1412.05	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=7.887;DP=600;FS=0.776;HRun=0;HaplotypeScore=119.1609;InbreedingCoeff=0.9751;MQ=83.94;MQ0=0;MQRankSum=-8.335;QD=34.44;ReadPosRankSum=0.043;VQSLOD=3.5782;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:93.15:0,93,2639	0/0:11,0:11:33.11:0,33,998	0/0:24,0:24:59.81:0,60,1470	0/0:16,0:15:36.12:0,36,1062	0/0:37,0:37:99:0,111,3087	0/0:20,0:20:60.21:0,60,1856	0/0:15,0:15:39.13:0,39,1166	0/0:32,0:32:87.18:0,87,2367	0/0:16,0:16:48.15:0,48,1330	0/0:32,0:32:84.28:0,84,2538	0/0:35,0:35:99:0,102,2913	0/0:9,0:9:18.06:0,18,557	0/0:16,0:16:48.15:0,48,1418	0/0:20,0:20:57.20:0,57,1723	1/1:1,14:15:27.09:543,27,0	0/0:14,0:14:42.13:0,42,1191	0/0:16,0:16:42.14:0,42,1252	1/1:2,7:9:9.03:189,9,0	0/0:19,0:19:57.18:0,57,1592	0/0:39,0:39:99:0,111,3094	0/0:15,0:15:39.13:0,39,1209	0/0:19,0:19:51.17:0,51,1485	0/0:25,0:25:75.26:0,75,2324	0/0:9,0:9:27.09:0,27,837	1/1:0,17:17:39.13:818,39,0	0/0:26,0:26:75.24:0,75,2112	0/0:34,0:33:99:0,99,2862	0/0:28,0:28:78.25:0,78,2348
chr10	2971061	.	TACAC	T	1183.30	PASS	AB=0.611;AC=7;AF=0.130;AN=54;BaseQRankSum=4.344;DP=426;FS=0.777;HRun=0;HaplotypeScore=74.4332;InbreedingCoeff=0.6978;MQ=63.51;MQ0=10;MQRankSum=-1.337;QD=18.49;ReadPosRankSum=1.491;VQSLOD=3.3733;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:19:2.80:0,3,35	0/0:10,0:9:24.07:0,24,526	./.	0/0:18,0:12:6.01:0,6,76	0/0:22,0:23:27.96:0,28,923	0/0:14,0:14:33.11:0,33,782	0/0:12,0:13:20.89:0,21,396	1/1:10,7:17:21.01:250,21,0	0/0:10,0:10:21.07:0,21,496	0/0:15,0:16:23.81:0,24,440	0/0:23,0:22:39.09:0,39,894	0/0:14,0:13:27.08:0,27,594	0/0:10,0:10:20.22:0,20,327	0/0:11,0:11:21.07:0,21,492	1/1:2,11:14:21.04:307,21,0	0/0:9,0:9:21.07:0,21,485	0/0:13,0:16:15.05:0,15,251	0/1:4,7:11:35.52:220,0,36	0/0:11,0:8:3.01:0,3,60	0/0:11,0:11:24.07:0,24,498	0/0:14,0:13:21.06:0,21,455	0/0:19,0:18:27.09:0,27,643	0/0:14,0:14:27.09:0,27,593	0/0:13,0:13:18.06:0,18,424	1/1:7,14:22:36.12:551,36,0	0/0:12,0:19:30.10:0,30,500	0/0:9,0:21:39.13:0,39,728	0/0:9,0:12:12.04:0,12,243
chr10	2971268	.	AC	A	395.26	PASS	AB=0.650;AC=5;AF=0.096;AN=52;BaseQRankSum=1.614;DP=405;FS=14.018;HRun=4;HaplotypeScore=40.6592;InbreedingCoeff=0.4363;MQ=26.16;MQ0=94;MQRankSum=-1.113;QD=11.98;ReadPosRankSum=0.756;VQSLOD=0.6334;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:8:15.52:0,16,210	0/0:4,0:2:3.01:0,3,42	./.	./.	0/0:11,0:4:9.03:0,9,126	0/0:15,0:11:6.02:0,6,84	0/0:23,0:6:9.03:0,9,126	0/0:24,0:12:36.12:0,36,496	0/0:18,0:14:18.06:0,18,251	0/0:21,0:11:33.07:0,33,438	0/0:4,0:3:3.01:0,3,42	0/0:21,0:12:9.03:0,9,126	0/0:12,0:6:6.02:0,6,84	0/0:21,0:13:12:0,12,145	0/0:4,0:3:6.02:0,6,84	0/0:10,0:5:6.02:0,6,84	0/0:23,0:16:15.01:0,15,188	0/0:5,0:3:6.02:0,6,84	0/0:16,0:13:33.04:0,33,418	0/0:11,0:10:24.08:0,24,335	0/0:43,0:20:15.05:0,15,207	0/0:16,0:7:9.03:0,9,122	0/0:6,0:5:11.73:0,12,166	0/0:29,0:16:12.04:0,12,167	0/0:13,0:10:30.06:0,30,386	0/1:6,7:9:17.92:225,0,18	1/1:1,8:7:15.05:180,15,0	1/1:6,5:5:9.03:108,9,0
chr10	2971400	.	GT	G	823.08	PASS	AB=0.556;AC=13;AF=0.260;AN=50;BaseQRankSum=5.018;DP=490;FS=0.000;HRun=2;HaplotypeScore=31.7636;InbreedingCoeff=0.6016;MQ=28.52;MQ0=135;MQRankSum=-5.236;QD=9.57;ReadPosRankSum=2.706;VQSLOD=1.3514;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,21:4:6.02:78,6,0	0/0:8,0:4:8.99:0,9,110	./.	./.	0/0:19,0:8:6.02:0,6,90	0/0:12,0:11:12:0,12,149	0/0:27,0:5:3.01:0,3,45	./.	0/0:26,0:19:36.04:0,36,484	0/0:20,0:11:33.11:0,33,493	0/0:10,0:7:12.04:0,12,179	0/0:20,0:12:8.70:0,9,134	0/0:17,0:11:18.06:0,18,269	0/0:35,0:18:19.99:0,20,263	1/1:2,6:5:9.03:117,9,0	0/0:12,0:3:6.02:0,6,90	0/0:36,0:25:6.02:0,6,90	1/1:2,6:3:6.02:78,6,0	0/0:33,0:10:27.07:0,27,379	0/0:9,0:3:6.02:0,6,90	0/0:41,0:16:12.04:0,12,180	0/0:6,0:2:6.02:0,6,90	0/0:10,0:6:2.94:0,3,45	0/0:33,0:23:6.02:0,6,90	1/1:2,10:6:6.02:78,6,0	0/1:4,16:10:14.83:320,0,15	1/1:0,7:6:12.04:155,12,0	1/1:1,6:5:12.04:156,12,0
chr10	2972497	.	GC	G	340.39	PASS	AC=14;AF=1.000;AN=14;DP=297;FS=0.000;HRun=1;HaplotypeScore=13.1522;MQ=8.26;MQ0=238;QD=7.40;VQSLOD=0.5756;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	1/1:1,7:2:3.01:37,3,0	./.	./.	./.	./.	./.	1/1:1,5:1:3.01:33,3,0	./.	./.	./.	./.	./.	./.	./.	./.	1/1:2,5:3:8.97:89,9,0	./.	./.	1/1:3,3:3:9.03:111,9,0	./.	1/1:4,0:4:11.89:82,12,0	1/1:9,0:2:5.91:38,6,0	./.	1/1:5,0:1:2.97:20,3,0
chr10	2972498	.	CA	C	473.01	PASS	AC=14;AF=1.000;AN=14;DP=297;FS=0.000;HRun=2;HaplotypeScore=11.4945;MQ=8.26;MQ0=238;QD=10.06;VQSLOD=1.1506;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	1/1:8,0:2:3.01:37,3,0	./.	./.	./.	./.	./.	1/1:7,0:1:3.01:33,3,0	./.	./.	./.	./.	./.	./.	./.	./.	1/1:6,0:3:8.97:89,9,0	./.	./.	1/1:6,0:3:9.03:111,9,0	./.	1/1:0,4:4:12.04:156,12,0	1/1:7,3:2:6.02:78,6,0	./.	1/1:3,2:1:3.01:39,3,0
chr10	2973189	.	TTA	T	707.69	PASS	AC=12;AF=1.000;AN=12;DP=892;FS=0.000;HRun=0;HaplotypeScore=24.4435;MQ=4.80;MQ0=756;QD=3.98;VQSLOD=1.3137;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:17,6:4:12.04:194,12,0	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	1/1:20,2:1:3.01:49,3,0	./.	1/1:36,5:4:12.04:194,12,0	./.	./.	./.	./.	./.	1/1:24,4:2:6.02:98,6,0	1/1:36,4:3:9.03:146,9,0	1/1:22,2:2:6.02:97,6,0
chr10	2974897	.	TC	T	98.24	PASS	AC=6;AF=0.60;AN=10;BaseQRankSum=-1.398;DP=37;FS=5.229;HRun=2;HaplotypeScore=14.2722;MQ=111.38;MQ0=10;MQRankSum=-0.597;QD=19.65;ReadPosRankSum=-0.278;VQSLOD=3.1186;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:14,0:8:6.48:0,6,83	0/0:12,0:2:0.97:0,1,36	./.	./.	./.	./.	./.	./.	1/1:0,1:1:3.01:39,3,0	./.	./.	./.	./.	./.	./.	./.	./.	1/1:0,3:3:8.99:98,9,0	./.	./.	1/1:0,1:1:3.01:39,3,0	./.	./.	./.	./.	./.
chr10	2978808	.	TAAAAAAATA	T	1930.15	PASS	AB=1.000;AC=7;AF=0.130;AN=54;BaseQRankSum=3.713;DP=294;FS=21.323;HRun=0;HaplotypeScore=87.0302;InbreedingCoeff=0.7459;MQ=71.80;MQ0=4;MQRankSum=-5.022;QD=47.08;ReadPosRankSum=0.568;VQSLOD=1.4413;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:36.07:0,36,1054	0/0:3,0:3:9.03:0,9,353	0/0:28,0:15:20.65:0,21,247	0/0:20,0:11:11.32:0,11,117	0/0:5,0:5:15.05:0,15,582	0/0:9,0:9:27.09:0,27,1241	0/0:6,0:6:18.05:0,18,507	0/0:25,0:24:30.14:0,30,1345	0/0:7,0:7:18.06:0,18,834	0/0:20,0:20:57.20:0,57,2436	0/0:11,0:11:30.10:0,30,1171	0/0:8,0:8:24.08:0,24,957	0/0:4,0:4:12.04:0,12,542	0/0:4,0:4:9.03:0,9,417	0/1:9,0:9:7.36:7,0,506	0/0:4,0:4:9.03:0,9,268	0/0:20,0:20:49.05:0,49,1631	0/0:5,0:5:12.04:0,12,348	0/0:11,0:11:33.11:0,33,1422	0/0:7,0:7:21.07:0,21,613	0/0:7,0:7:21.07:0,21,852	./.	0/0:5,0:5:15:0,15,463	0/0:10,0:10:21.07:0,21,811	0/0:14,0:14:10.16:0,10,1018	1/1:0,13:13:39.10:974,39,0	1/1:0,14:14:27.01:755,27,0	1/1:1,4:5:12.04:336,12,0
chr10	2978816	.	TA	T	1824.31	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=9.302;DP=311;FS=1.306;HRun=8;HaplotypeScore=45.0016;InbreedingCoeff=0.9163;MQ=70.25;MQ0=4;MQRankSum=-3.113;QD=17.37;ReadPosRankSum=1.359;VQSLOD=3.2563;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,15:15:36.06:348,36,0	0/0:5,0:5:15.05:0,15,181	0/0:26,0:13:16.35:0,16,154	0/0:18,0:10:8.63:0,9,54	0/0:7,0:7:21.06:0,21,253	0/0:10,0:10:30.09:0,30,362	0/0:7,0:7:18.04:0,18,205	1/1:5,26:30:75.10:717,75,0	0/0:6,0:6:18.06:0,18,217	0/0:22,0:22:60.18:0,60,715	0/0:11,0:11:30.08:0,30,352	0/0:8,0:8:24.05:0,24,277	0/0:4,0:4:12.04:0,12,145	0/0:5,0:5:12.04:0,12,145	1/1:1,9:10:24.04:231,24,0	0/0:6,0:6:15.05:0,15,181	0/0:21,0:21:54.15:0,54,640	1/1:0,5:5:12.02:116,12,0	0/0:12,0:12:33.10:0,33,399	0/0:9,0:9:27.07:0,27,311	0/0:10,0:10:27.08:0,27,325	0/0:1,0:1:3.01:0,3,36	0/0:5,0:5:9.03:0,9,109	0/0:11,0:11:24.07:0,24,286	1/1:1,12:13:36.05:348,36,0	1/1:13,0:13:33.44:149,33,0	1/1:14,0:14:22.46:81,22,0	1/1:4,0:4:9.98:36,10,0
chr10	2982982	.	CA	C	3491.85	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=8.703;DP=615;FS=1.278;HRun=7;HaplotypeScore=68.7536;InbreedingCoeff=0.9989;MQ=56.65;MQ0=5;MQRankSum=0.207;QD=23.75;ReadPosRankSum=-1.616;VQSLOD=3.1072;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,27:30:40.49:726,40,0	0/0:9,0:9:24.08:0,24,302	0/0:26,0:19:38.99:0,39,434	0/0:18,0:11:29.83:0,30,347	0/0:23,0:23:69.22:0,69,865	0/0:21,0:21:57.17:0,57,706	0/0:15,0:15:45.14:0,45,566	1/1:6,27:23:51.09:508,51,0	0/0:22,0:22:63.20:0,63,792	0/0:30,0:28:75.17:0,75,914	0/0:36,0:36:99:0,99,1223	0/0:12,0:12:33.11:0,33,415	0/0:17,0:17:42.13:0,42,524	0/0:11,0:10:27.09:0,27,340	0/0:22,0:22:60.18:0,60,741	0/0:13,0:13:36.12:0,36,453	0/0:24,0:25:63.20:0,63,791	0/0:17,0:17:48.15:0,48,604	0/0:24,0:22:60.18:0,60,743	0/0:31,0:31:90.25:0,90,1114	0/0:15,0:15:42.12:0,42,515	0/0:22,0:22:57.18:0,57,717	0/0:25,0:25:72.22:0,72,892	0/0:11,0:11:30.09:0,30,367	0/0:23,0:23:69.20:0,69,853	1/1:3,31:34:55.46:880,55,0	1/1:3,29:32:87.19:888,87,0	1/1:2,16:18:48.11:490,48,0
chr10	2983337	.	C	CA	1835.39	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=5.391;DP=605;FS=12.395;HRun=11;HaplotypeScore=83.0157;InbreedingCoeff=0.9257;MQ=63.58;MQ0=2;MQRankSum=-1.775;QD=9.76;ReadPosRankSum=-4.040;VQSLOD=0.4879;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:20:22.57:113,23,0	0/0:14,0:14:37.82:0,38,284	0/0:19,0:16:16.46:0,16,134	0/0:17,0:11:11.26:0,11,66	0/0:38,0:38:83.61:0,84,647	0/0:19,0:20:55.82:0,56,424	0/0:12,2:15:4.47:0,4,208	1/1:9,0:21:29.55:161,30,0	0/0:24,0:24:62.74:0,63,487	0/0:21,1:24:15.44:0,15,283	0/0:28,1:27:23.20:0,23,419	0/0:13,0:14:31.88:0,32,238	0/0:13,0:14:34.88:0,35,260	0/0:14,0:14:7.51:0,8,184	1/1:3,20:23:21.86:403,22,0	0/0:15,0:16:34.88:0,35,261	0/0:2,0:18:23.79:0,24,71	1/1:10,11:21:4.12:221,4,0	0/0:23,0:22:50.79:0,51,395	0/0:31,1:32:31.31:0,31,416	0/0:16,0:16:38.83:0,39,300	0/0:16,0:15:32.84:0,33,255	0/0:26,0:29:60.70:0,61,452	0/0:18,0:18:44.81:0,45,348	1/1:1,21:22:45.09:457,45,0	1/1:13,1:36:45.07:329,45,0	1/1:5,1:26:47.84:251,48,0	1/1:9,1:17:17.21:101,17,0
chr10	2984008	.	G	GA	2123.27	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-6.006;DP=583;FS=2.282;HRun=6;HaplotypeScore=58.2252;InbreedingCoeff=0.9967;MQ=61.36;MQ0=8;MQRankSum=-1.693;QD=29.49;ReadPosRankSum=0.565;VQSLOD=4.3044;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:39.09:0,39,397	0/0:8,0:7:21.04:0,21,209	0/0:24,1:11:26.75:0,27,251	0/0:24,0:16:23.35:0,23,261	0/0:28,0:28:66.12:0,66,665	0/0:19,0:17:42.10:0,42,428	0/0:14,0:14:36.04:0,36,356	0/0:32,0:32:84.15:0,84,839	0/0:24,0:23:63.13:0,63,636	0/0:25,0:24:59.32:0,59,576	0/0:29,0:28:75.15:0,75,757	0/0:13,0:13:33.07:0,33,337	0/0:22,0:22:54.12:0,54,551	0/0:22,0:22:65.82:0,66,653	0/0:26,0:26:66.15:0,66,673	0/0:12,0:12:36.08:0,36,367	0/0:19,0:19:44.23:0,44,450	0/0:14,0:12:30.04:0,30,297	0/0:17,0:16:45.08:0,45,448	0/0:32,0:30:81.15:0,81,810	0/0:17,0:17:51.10:0,51,514	0/0:17,0:16:36.05:0,36,355	0/0:28,0:26:71.38:0,71,710	0/0:14,0:14:42.07:0,42,420	0/0:14,0:14:39.09:0,39,398	1/1:5,21:25:35.60:761,36,0	1/1:2,26:28:64.72:844,65,0	1/1:0,18:18:54.12:660,54,0
chr10	2984209	.	T	TA	1581.61	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=8.399;DP=541;FS=5.449;HRun=7;HaplotypeScore=88.7467;InbreedingCoeff=0.9303;MQ=57.46;MQ0=10;MQRankSum=-9.066;QD=10.34;ReadPosRankSum=-3.011;VQSLOD=1.6858;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:19:32.75:165,33,0	0/0:14,0:15:39.06:0,39,377	0/0:13,0:7:18.03:0,18,173	0/0:23,0:15:24.03:0,24,232	0/0:25,0:25:72.11:0,72,695	0/0:24,0:24:66.06:0,66,628	0/0:19,0:19:51.08:0,51,493	1/1:14,0:14:16.37:82,16,0	0/0:12,0:12:33.05:0,33,319	0/0:22,0:22:51.07:0,51,493	0/0:23,0:23:57.07:0,57,544	0/0:16,0:16:45.06:0,45,429	0/0:22,0:22:63.10:0,63,608	0/0:26,0:26:66.08:0,66,631	1/1:15,0:15:19.89:98,20,0	0/0:14,0:14:39.06:0,39,377	1/1:2,28:30:77.44:973,77,0	1/1:13,0:13:17.02:86,17,0	0/0:23,0:13:7.37:0,7,258	0/0:30,0:30:81.13:0,81,782	0/0:19,0:19:57.09:0,57,551	0/0:24,0:24:66.09:0,66,631	0/0:23,0:23:63.10:0,63,608	0/0:13,0:13:26.74:0,27,260	1/1:16,0:16:14.20:70,14,0	1/1:24,0:24:2.44:111,2,0	1/1:16,0:16:34.09:168,34,0	1/1:5,0:5:5.78:32,6,0
chr10	2984212	.	A	AAAAAAAAC	10407.06	PASS	AB=0.647;AC=15;AF=0.268;AN=56;BaseQRankSum=9.051;DP=576;FS=6.463;HRun=0;HaplotypeScore=150.8702;InbreedingCoeff=0.8213;MQ=57.73;MQ0=9;MQRankSum=-13.769;QD=67.14;ReadPosRankSum=-6.148;VQSLOD=2.7902;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,0:26:0.58:1383,1,0	0/0:16,0:16:42.13:0,42,1038	0/0:12,0:7:18.06:0,18,454	0/0:22,0:14:9.76:0,10,628	0/0:27,0:27:72.24:0,72,1820	0/0:25,0:25:69.22:0,69,1707	0/0:19,0:19:54.17:0,54,1350	1/1:7,5:22:54.13:1972,54,0	0/0:11,0:11:33.11:0,33,856	0/0:21,0:21:54.17:0,54,1351	0/0:24,0:24:60.16:0,60,1417	0/0:16,0:16:48.10:0,48,1106	0/0:21,0:21:63.22:0,63,1602	0/0:24,0:24:66.19:0,66,1602	1/1:8,0:20:42.14:1412,42,0	0/0:15,0:15:42.13:0,42,1037	0/0:33,0:32:87.23:0,87,1011	1/1:12,0:14:31.59:651,32,0	0/0:23,0:13:7.41:0,7,662	0/0:30,0:29:81.27:0,81,2092	0/0:20,0:20:57.20:0,57,1479	0/0:25,0:25:72.21:0,72,1639	0/0:23,0:23:66.17:0,66,1625	0/0:13,0:13:33.09:0,33,758	1/1:10,0:19:33.11:1089,33,0	0/1:10,8:22:23.66:1746,0,24	1/1:4,12:25:45.15:1912,45,0	1/1:1,2:7:6.02:241,6,0
chr10	2985257	.	C	CT	1473.82	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=7.572;DP=528;FS=49.139;HRun=1;HaplotypeScore=68.7613;InbreedingCoeff=0.7633;MQ=51.00;MQ0=5;MQRankSum=-2.993;QD=22.00;ReadPosRankSum=-0.852;VQSLOD=0.4853;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:42.36:0,42,865	0/0:8,0:8:21.07:0,21,272	0/0:22,0:13:39.13:0,39,507	0/0:24,0:11:33.11:0,33,427	0/0:22,0:22:63.20:0,63,817	0/0:18,1:18:48.16:0,48,622	0/0:11,0:11:27.09:0,27,351	0/0:16,0:14:39.12:0,39,491	0/0:23,0:23:63.20:0,63,818	0/0:24,0:24:69.22:0,69,896	0/0:17,0:17:51.15:0,51,646	0/0:18,0:18:54.18:0,54,698	0/0:10,0:10:30.10:0,30,389	0/0:18,0:18:48.16:0,48,623	0/0:18,0:18:48.16:0,48,623	0/0:24,0:24:72.23:0,72,935	0/1:17,0:16:20.58:21,0,422	0/0:5,0:5:12.04:0,12,156	0/0:9,0:7:21.07:0,21,273	0/0:32,0:32:96.30:0,96,1231	0/0:26,0:26:60.19:0,60,778	0/0:23,0:23:69.22:0,69,896	0/0:20,0:20:60.18:0,60,763	0/0:15,0:15:39.13:0,39,506	0/0:23,0:23:69.22:0,69,895	1/1:1,21:18:54.14:784,54,0	1/1:2,25:22:51.17:764,51,0	1/1:0,1:1:3.01:45,3,0
chr10	2985313	.	TCACACA	T	547.50	PASS	AB=0.800;AC=9;AF=0.188;AN=48;BaseQRankSum=5.464;DP=499;FS=2.893;HRun=0;HaplotypeScore=117.8132;InbreedingCoeff=0.5147;MQ=45.40;MQ0=20;MQRankSum=-5.782;QD=6.29;ReadPosRankSum=-1.938;VQSLOD=1.9385;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:35:21.02:0,21,352	0/0:6,0:6:6:0,6,68	./.	./.	0/0:28,0:26:24.06:0,24,501	0/0:18,0:14:15.03:0,15,313	0/0:14,0:13:3.01:0,3,97	./.	0/0:12,0:13:3.34:0,3,152	0/0:17,0:16:24.05:0,24,447	0/0:18,0:14:14.76:0,15,302	0/0:12,0:12:15.03:0,15,374	0/0:11,0:12:15.52:0,16,278	0/0:14,0:15:15.05:0,15,349	1/1:10,0:15:6.87:65,7,0	0/0:17,0:17:18.06:0,18,459	1/1:11,1:10:3.01:61,3,0	0/0:8,0:6:5.89:0,6,104	0/0:14,0:8:3.01:0,3,63	0/0:18,0:18:18.04:0,18,416	0/0:17,0:18:12.02:0,12,157	0/0:20,0:19:6.02:0,6,140	0/0:13,0:12:9.02:0,9,178	0/0:16,0:19:30.10:0,30,749	1/1:18,0:18:2.49:9,2,0	0/1:15,4:20:66.66:275,0,67	1/1:18,4:22:15.05:266,15,0	./.
chr10	2985676	.	GTATA	G	2633.42	PASS	AB=1.000;AC=10;AF=0.185;AN=54;BaseQRankSum=6.058;DP=427;FS=12.547;HRun=0;HaplotypeScore=80.1298;InbreedingCoeff=0.8028;MQ=61.14;MQ0=4;MQRankSum=0.897;QD=22.51;ReadPosRankSum=-0.879;VQSLOD=1.8086;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:33.04:0,33,353	0/0:8,0:8:18.06:0,18,404	./.	0/1:10,0:5:0.08:0,0,31	0/0:19,0:19:42.14:0,42,1024	0/0:16,0:16:42.14:0,42,1029	0/0:5,0:5:12.04:0,12,274	1/1:30,0:26:36.65:468,37,0	0/0:13,0:13:27.08:0,27,602	0/0:15,0:15:39.13:0,39,948	0/0:18,0:18:45.13:0,45,949	0/0:14,0:14:39.13:0,39,869	0/0:18,0:18:45.15:0,45,1093	0/0:10,0:10:30.10:0,30,673	0/0:12,0:12:21.07:0,21,371	0/0:11,0:11:30.08:0,30,676	0/0:23,0:23:48.14:0,48,584	0/1:8,0:8:4.85:5,0,193	0/0:15,0:14:35.87:0,36,729	0/0:17,0:17:39.13:0,39,961	0/0:17,0:17:39.13:0,39,963	0/0:5,0:5:12.04:0,12,271	0/0:16,0:16:39.13:0,39,902	0/0:10,0:10:27.09:0,27,599	0/0:18,0:18:39.13:0,39,680	1/1:4,30:33:90.30:1482,90,0	1/1:4,26:30:38.90:677,39,0	1/1:0,5:5:9.03:156,9,0
chr10	2985688	.	ATATG	A	1991.18	PASS	AB=1.000;AC=8;AF=0.143;AN=56;BaseQRankSum=7.736;DP=437;FS=17.190;HRun=0;HaplotypeScore=83.6002;InbreedingCoeff=0.6586;MQ=66.29;MQ0=4;MQRankSum=2.504;QD=19.52;ReadPosRankSum=0.435;VQSLOD=2.0136;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:23.20:0,23,97	0/0:8,0:8:18.05:0,18,434	0/0:10,0:5:8.92:0,9,67	0/0:10,0:6:11.72:0,12,68	0/0:19,0:19:51.09:0,51,1165	0/0:14,0:14:42.14:0,42,1094	0/0:8,0:8:24.03:0,24,397	1/1:0,28:24:69.07:992,69,0	0/0:12,0:12:36.10:0,36,808	0/0:16,0:16:48.13:0,48,1066	0/0:17,0:17:48.12:0,48,1070	0/0:16,0:16:48.11:0,48,1055	0/0:18,0:18:54.16:0,54,1227	0/0:11,0:11:33.07:0,33,696	0/0:13,0:13:21.07:0,21,372	0/0:10,0:10:27.08:0,27,657	0/0:26,0:26:41:0,41,195	0/1:6,0:6:24.75:25,0,194	0/0:20,0:17:47.84:0,48,835	0/0:17,0:17:45.10:0,45,1075	0/0:17,0:17:48.14:0,48,1160	0/0:4,0:4:12.04:0,12,325	0/0:15,0:15:42.08:0,42,942	0/0:13,0:13:39.09:0,39,799	0/0:20,0:20:39.11:0,39,656	1/1:32,0:31:86.78:722,87,0	0/1:31,0:31:61:318,0,61	1/1:5,0:5:9.01:84,9,0
chr10	2985690	.	ATG	A	1163.95	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=5.001;DP=439;FS=5.008;HRun=0;HaplotypeScore=71.9322;InbreedingCoeff=0.8885;MQ=66.56;MQ0=4;MQRankSum=-0.015;QD=15.73;ReadPosRankSum=-0.733;VQSLOD=3.0138;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,18:20:24.08:319,24,0	0/0:8,0:8:15.05:0,15,259	0/0:9,0:5:8.92:0,9,67	0/0:8,0:6:8.52:0,9,50	0/0:19,0:19:47.76:0,48,716	0/0:14,0:14:39.10:0,39,620	0/0:8,0:8:21.02:0,21,256	1/1:28,0:24:56.58:429,57,0	0/0:12,0:12:36.10:0,36,560	0/0:17,0:17:45.11:0,45,634	0/0:17,0:17:48.11:0,48,702	0/0:16,0:16:45.11:0,45,679	0/0:18,0:18:48.05:0,48,663	0/0:11,0:11:24.07:0,24,379	0/0:0,0:15:21:0,21,184	0/0:9,0:9:21.07:0,21,355	1/1:4,22:26:42.14:558,42,0	0/0:1,0:6:6.95:0,7,97	0/0:20,0:17:24.22:0,24,431	0/0:17,0:17:45.10:0,45,689	0/0:17,0:17:48.10:0,48,711	0/0:5,0:5:15.04:0,15,232	0/0:15,0:15:36.07:0,36,556	0/0:15,0:15:44.94:0,45,539	0/0:0,0:20:36:0,36,315	0/0:33,0:32:75.72:0,76,369	0/0:31,0:31:46.24:0,46,230	0/0:5,0:5:7.49:0,7,28
chr10	2986308	.	CATAT	C	694.89	PASS	AC=6;AF=0.136;AN=44;BaseQRankSum=5.770;DP=159;FS=0.000;HRun=0;HaplotypeScore=34.4763;InbreedingCoeff=0.5168;MQ=77.35;MQ0=3;MQRankSum=-4.682;QD=24.82;ReadPosRankSum=1.044;VQSLOD=3.0982;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	0/0:3,0:3:3.01:0,3,58	./.	0/0:18,0:11:0.91:0,1,48	0/0:8,0:8:18.06:0,18,445	0/0:10,0:10:18.05:0,18,392	0/0:2,0:2:3.01:0,3,74	0/0:10,0:10:15.03:0,15,218	./.	0/0:4,0:4:9.03:0,9,222	0/0:6,0:6:15.05:0,15,321	0/0:8,0:9:17.80:0,18,383	0/0:8,0:8:15.03:0,15,253	0/0:3,0:3:6.02:0,6,124	1/1:2,4:6:12.04:188,12,0	0/0:2,0:2:3.01:0,3,74	0/0:3,0:3:3:0,3,37	1/1:3,2:5:9.03:144,9,0	0/0:13,0:11:23.44:0,23,450	0/0:7,0:8:14.77:0,15,259	0/0:1,0:1:3.01:0,3,74	./.	0/0:3,0:4:6.02:0,6,127	./.	1/1:8,9:17:30.10:486,30,0	0/0:6,0:6:6.01:0,6,95	./.	0/0:3,0:3:3:0,3,57
chr10	2986343	.	T	TCATA	768.56	PASS	AB=0.625;AC=13;AF=0.232;AN=56;BaseQRankSum=4.743;DP=225;FS=0.000;HRun=0;HaplotypeScore=53.4588;InbreedingCoeff=0.6388;MQ=73.09;MQ0=4;MQRankSum=-4.736;QD=13.72;ReadPosRankSum=-4.217;VQSLOD=1.5328;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:3,0:3:6.02:0,6,107	0/0:5,0:5:15.05:0,15,267	1/1:15,0:4:2.22:7,2,0	0/0:40,0:17:18.52:0,19,139	0/0:16,0:16:45.13:0,45,739	0/0:6,0:6:18.06:0,18,314	0/0:6,0:6:15.05:0,15,267	0/0:9,0:9:27.09:0,27,479	0/0:4,0:4:12.04:0,12,214	0/0:7,0:7:21.07:0,21,371	0/0:9,0:9:27.09:0,27,475	0/0:8,0:8:21.07:0,21,367	0/0:10,0:10:30.10:0,30,526	0/0:5,0:5:15.04:0,15,238	1/1:6,4:10:6.95:136,7,0	0/0:5,0:5:15.05:0,15,267	0/0:3,0:3:6.02:0,6,105	1/1:4,1:5:5.99:86,6,0	0/0:6,0:6:15.05:0,15,264	0/0:7,0:7:21.04:0,21,315	0/0:5,0:5:12.04:0,12,214	0/0:3,0:3:6.02:0,6,107	0/0:7,0:7:15.05:0,15,267	0/0:3,0:3:9.03:0,9,160	1/1:11,6:17:12.92:268,13,0	0/1:2,2:5:38.36:281,0,38	1/1:0,1:1:3.01:66,3,0	1/1:1,2:3:2.88:77,3,0
chr10	2986369	.	GTA	G	345.13	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=4.182;DP=294;FS=1.347;HRun=0;HaplotypeScore=53.0562;InbreedingCoeff=0.7594;MQ=61.92;MQ0=8;MQRankSum=1.844;QD=10.46;ReadPosRankSum=-1.042;VQSLOD=3.0761;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:8:12.03:0,12,220	0/0:6,0:6:18.06:0,18,330	0/0:17,0:6:12.93:0,13,131	0/0:39,0:10:11.99:0,12,113	0/0:18,0:18:53.92:0,54,939	0/0:10,0:10:27.09:0,27,487	0/0:9,0:9:27.09:0,27,468	0/0:17,0:17:48.15:0,48,823	0/0:6,0:6:15.05:0,15,267	0/0:11,0:11:33.11:0,33,595	0/0:13,0:13:39.13:0,39,706	0/0:11,0:11:33.11:0,33,588	0/0:14,0:14:42.14:0,42,753	0/0:12,0:12:36.11:0,36,628	1/1:1,14:15:14.59:214,15,0	0/0:7,0:7:21.07:0,21,385	0/0:5,0:5:12.04:0,12,209	1/1:1,4:5:12.04:172,12,0	0/0:13,0:10:27.09:0,27,483	0/0:8,0:8:24.07:0,24,410	0/0:6,0:6:18.06:0,18,330	0/0:4,0:4:9.03:0,9,165	0/0:9,0:9:24.08:0,24,426	0/0:6,0:6:18.06:0,18,330	1/1:1,12:13:5.29:85,5,0	0/0:7,0:7:18.06:0,18,283	0/0:2,0:2:3.01:0,3,49	0/0:2,0:2:2.98:0,3,21
chr10	2986389	.	GTATA	G	169.12	PASS	AB=0.600;AC=3;AF=0.058;AN=52;BaseQRankSum=4.462;DP=334;FS=4.548;HRun=0;HaplotypeScore=66.6131;InbreedingCoeff=0.5035;MQ=59.27;MQ0=4;MQRankSum=-4.433;QD=18.79;ReadPosRankSum=0.012;VQSLOD=2.6194;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:12.03:0,12,324	0/0:10,0:10:30.10:0,30,755	0/0:9,0:3:2.97:0,3,25	./.	0/0:23,0:23:66.17:0,66,1513	0/0:16,0:16:45.13:0,45,1037	0/0:14,0:14:42.09:0,42,852	0/0:20,0:20:60.19:0,60,1435	0/0:11,0:11:33.10:0,33,776	0/0:12,0:12:36.11:0,36,852	0/0:20,0:20:57.17:0,57,1326	0/0:12,0:12:36.08:0,36,814	0/0:15,0:15:45.15:0,45,1198	0/0:15,0:15:45.15:0,45,1199	0/0:18,0:18:27.08:0,27,628	0/0:11,0:11:33.07:0,33,798	0/0:8,0:8:21.07:0,21,531	0/0:6,0:6:18.02:0,18,391	0/0:12,0:12:33.10:0,33,762	0/0:10,0:10:30.09:0,30,732	0/0:10,0:10:30.10:0,30,786	0/0:6,0:6:15.05:0,15,382	0/0:9,0:9:24.08:0,24,647	0/0:9,0:9:27.09:0,27,673	0/0:15,0:15:14.51:0,15,335	0/1:2,4:6:8.96:193,0,9	1/1:1,2:3:6:69,6,0	./.
chr10	2986403	.	ATG	A	127.63	PASS	AB=0.703;AC=2;AF=0.038;AN=52;BaseQRankSum=4.991;DP=349;FS=6.697;HRun=0;HaplotypeScore=60.3694;InbreedingCoeff=0.2345;MQ=62.46;MQ0=1;MQRankSum=-5.044;QD=9.12;ReadPosRankSum=0.013;VQSLOD=1.9131;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:12.03:0,12,232	0/0:11,0:11:33.11:0,33,620	0/0:6,0:2:2.22:0,2,7	./.	0/0:25,0:25:75.26:0,75,1403	0/0:16,0:16:48.16:0,48,900	0/0:14,0:14:42.13:0,42,743	0/0:25,0:25:72.24:0,72,1269	0/0:12,0:12:36.12:0,36,692	0/0:10,0:10:30.10:0,30,576	0/0:19,0:19:57.20:0,57,1083	0/0:13,0:13:39.13:0,39,736	0/0:16,0:16:48.16:0,48,909	0/0:16,0:16:48.16:0,48,914	0/0:19,0:19:30.10:0,30,563	0/0:11,0:11:33.11:0,33,637	0/0:10,0:10:27.09:0,27,503	0/0:7,0:7:21.07:0,21,388	0/0:14,0:14:39.13:0,39,680	0/0:10,0:10:30.10:0,30,562	0/0:15,0:15:45.15:0,45,784	0/0:8,0:8:24.08:0,24,429	0/0:11,0:11:33.11:0,33,602	0/0:11,0:11:33.11:0,33,637	0/0:19,0:19:30.03:0,30,462	0/1:5,4:9:5:166,0,5	0/1:3,2:5:12.49:49,0,12	./.
chr10	2986409	.	A	ATG	376.61	PASS	AC=4;AF=0.077;AN=52;BaseQRankSum=2.624;DP=354;FS=8.785;HRun=0;HaplotypeScore=57.2120;InbreedingCoeff=0.8667;MQ=64.35;MQ0=0;MQRankSum=-3.075;QD=26.90;ReadPosRankSum=-0.681;VQSLOD=4.0683;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:12.04:0,12,160	0/0:12,0:12:36.12:0,36,479	0/0:3,0:1:3:0,3,28	./.	0/0:25,0:25:69.23:0,69,918	0/0:16,0:16:45.15:0,45,599	0/0:14,0:14:42.14:0,42,556	0/0:27,0:27:57.15:0,57,706	0/0:12,0:12:36.12:0,36,479	0/0:10,0:10:27.09:0,27,359	0/0:20,0:20:60.18:0,60,783	0/0:14,0:14:42.12:0,42,542	0/0:17,0:17:51.15:0,51,663	0/0:16,0:16:45.15:0,45,599	0/0:18,0:18:32.88:0,33,424	0/0:11,0:11:33.11:0,33,439	0/0:10,0:10:27.09:0,27,359	0/0:7,0:7:21.07:0,21,279	0/0:13,0:13:30.10:0,30,399	0/0:12,0:12:36.11:0,36,464	0/0:16,0:16:45.12:0,45,568	0/0:8,0:8:24.08:0,24,319	0/0:11,0:11:33.11:0,33,439	0/0:12,0:12:36.11:0,36,464	0/0:17,0:17:29.78:0,30,398	1/1:4,4:9:27.06:360,27,0	1/1:2,3:5:9.02:130,9,0	./.
chr10	2987287	.	A	AGC	5012.83	PASS	AB=0.607;AC=17;AF=0.304;AN=56;BaseQRankSum=13.976;DP=539;FS=0.000;HRun=0;HaplotypeScore=92.8340;InbreedingCoeff=0.9063;MQ=84.60;MQ0=1;MQRankSum=-8.011;QD=29.49;ReadPosRankSum=-0.383;VQSLOD=6.0978;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,24:30:56.95:901,57,0	0/0:6,0:6:18.06:0,18,291	0/0:23,0:21:39.91:0,40,811	0/0:39,0:35:90.72:0,91,1404	0/0:19,0:19:54.17:0,54,855	0/0:24,0:24:66.21:0,66,1052	0/0:25,0:25:75.25:0,75,1201	1/1:10,17:27:38.32:691,38,0	0/0:24,0:24:72.23:0,72,1147	0/0:16,0:16:48.15:0,48,736	0/0:12,0:12:36.12:0,36,587	0/0:12,0:12:36.12:0,36,585	0/0:15,0:15:36.11:0,36,562	0/0:14,0:14:42.14:0,42,685	1/1:1,19:20:56.54:744,57,0	0/0:16,0:16:48.16:0,48,778	1/1:3,12:15:10.65:382,11,0	1/1:5,5:10:23.32:221,23,0	0/0:23,0:23:69.22:0,69,1103	0/0:14,0:14:42.13:0,42,663	0/0:34,0:34:96.32:0,96,1542	0/0:18,0:18:54.18:0,54,870	0/0:17,0:17:51.15:0,51,781	0/0:18,0:18:51.16:0,51,806	1/1:4,8:12:27.06:327,27,0	0/1:6,11:17:55.30:496,0,55	1/1:8,23:31:45.26:944,45,0	1/1:0,8:8:24.04:307,24,0
chr10	2987288	.	A	AG	2845.90	PASS	AB=0.637;AC=16;AF=0.286;AN=56;BaseQRankSum=14.321;DP=540;FS=4.700;HRun=0;HaplotypeScore=86.4965;InbreedingCoeff=0.8104;MQ=85.22;MQ0=1;MQRankSum=-6.163;QD=16.55;ReadPosRankSum=1.632;VQSLOD=6.0797;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,24:30:40.14:556,40,0	0/0:6,0:6:18.06:0,18,252	0/0:23,0:22:57.63:0,58,756	0/0:39,0:35:92.96:0,93,1254	0/0:19,0:19:57.18:0,57,779	0/0:24,0:24:72.17:0,72,950	0/0:26,0:26:75.23:0,75,1030	1/1:11,17:28:17.02:343,17,0	0/0:24,0:24:72.23:0,72,990	0/0:16,0:16:45.15:0,45,629	0/0:12,0:12:36.12:0,36,503	0/0:12,0:12:36.12:0,36,503	0/0:14,0:14:36.10:0,36,484	0/0:14,0:14:42.14:0,42,587	1/1:1,19:20:51.18:496,51,0	0/0:16,0:16:48.16:0,48,671	1/1:4,12:16:30:274,30,0	0/1:5,5:10:40.39:77,0,40	0/0:22,0:22:66.22:0,66,923	0/0:13,0:13:39.13:0,39,545	0/0:33,0:33:93.31:0,93,1300	0/0:18,0:18:54.18:0,54,755	0/0:17,0:17:51.14:0,51,678	0/0:18,0:18:51.17:0,51,711	1/1:4,8:12:9:167,9,0	0/1:6,11:17:70.41:300,0,70	1/1:8,23:31:48.28:634,48,0	1/1:0,8:8:21.02:196,21,0
chr10	2987652	.	AAC	A	543.35	PASS	AC=6;AF=0.111;AN=54;BaseQRankSum=12.131;DP=494;FS=5.308;HRun=0;HaplotypeScore=69.8697;InbreedingCoeff=0.9897;MQ=74.62;MQ0=0;MQRankSum=-0.322;QD=7.15;ReadPosRankSum=3.520;VQSLOD=2.5155;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:45.08:0,45,729	0/0:5,0:5:15.03:0,15,235	0/0:17,0:17:41.54:0,42,648	0/0:10,0:10:27.09:0,27,460	0/0:31,0:31:93.29:0,93,1568	0/0:18,0:18:54.15:0,54,873	0/0:10,0:10:30.08:0,30,462	0/0:31,0:31:93.22:0,93,1436	0/0:18,0:18:51.12:0,51,809	0/0:21,0:21:57.18:0,57,930	0/0:24,0:24:63.05:0,63,1014	0/0:11,0:11:33.11:0,33,579	0/0:22,0:22:66.16:0,66,1047	0/0:19,0:19:57.15:0,57,919	0/0:19,0:19:57.18:0,57,976	0/0:14,0:14:42.13:0,42,705	0/0:13,0:13:39.11:0,39,656	./.	0/0:17,0:17:51.13:0,51,744	0/0:27,0:27:78.25:0,78,1345	0/0:10,0:10:29.82:0,30,421	0/0:15,0:15:45.14:0,45,755	0/0:25,0:25:69.20:0,69,1139	0/0:9,0:9:27.09:0,27,464	0/0:15,0:15:42.13:0,42,711	1/1:27,2:29:19.07:276,19,0	1/1:36,1:37:77:297,77,0	1/1:9,1:10:22.60:110,23,0
chr10	2987653	.	AC	A	2473.28	PASS	AC=6;AF=0.111;AN=54;BaseQRankSum=9.788;DP=496;FS=7.055;HRun=1;HaplotypeScore=52.4305;InbreedingCoeff=0.9911;MQ=74.57;MQ0=0;MQRankSum=-2.770;QD=32.54;ReadPosRankSum=4.110;VQSLOD=2.9086;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:51.06:0,51,631	0/0:5,0:5:15.03:0,15,190	0/0:17,0:17:41.09:0,41,507	0/0:10,0:10:27.09:0,27,371	0/0:32,0:32:96.26:0,96,1266	0/0:18,0:18:54.09:0,54,694	0/0:10,0:10:30.06:0,30,368	0/0:32,0:32:96.21:0,96,1198	0/0:18,0:18:51.10:0,51,655	0/0:19,0:19:56.76:0,57,727	0/0:22,0:22:57.94:0,58,797	0/0:11,0:11:33.11:0,33,455	0/0:22,0:22:66.16:0,66,849	0/0:19,0:19:57.15:0,57,743	0/0:21,0:21:63.17:0,63,829	0/0:14,0:14:42.12:0,42,555	0/0:13,0:13:39.10:0,39,524	./.	0/0:18,0:18:54.07:0,54,638	0/0:27,0:27:81.24:0,81,1095	0/0:10,0:10:20.25:0,20,311	0/0:17,0:17:48.13:0,48,629	0/0:24,0:24:69.18:0,69,898	0/0:9,0:9:27.07:0,27,359	0/0:14,0:14:42.13:0,42,568	1/1:3,26:29:42.24:998,42,0	1/1:1,36:37:93.23:1267,93,0	1/1:1,9:10:27:350,27,0
chr10	2988483	.	G	GA	1048.34	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-8.407;DP=626;FS=8.431;HRun=6;HaplotypeScore=62.4632;InbreedingCoeff=0.9924;MQ=79.81;MQ0=0;MQRankSum=-0.491;QD=29.95;ReadPosRankSum=-5.468;VQSLOD=1.3951;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,105,1065	0/0:15,0:15:45.10:0,45,459	0/0:17,0:17:43.78:0,44,404	0/0:15,0:15:18.83:0,19,251	0/0:31,0:31:90.14:0,90,900	0/0:18,0:18:48.11:0,48,490	0/0:19,0:19:48.11:0,48,489	1/1:4,31:35:93.27:1143,93,0	0/0:21,0:21:60.11:0,60,599	0/0:28,0:28:66.14:0,66,673	0/0:20,0:20:57.13:0,57,581	0/0:21,0:21:54.10:0,54,544	0/0:25,0:25:57.12:0,57,580	0/0:26,0:26:75.12:0,75,743	0/0:23,0:23:63.14:0,63,643	0/0:17,0:17:48.11:0,48,490	0/0:25,0:25:69.16:0,69,704	0/0:14,0:14:39.09:0,39,398	0/0:20,0:20:57.12:0,57,576	0/0:20,0:20:57.11:0,57,574	0/0:33,0:33:90.20:0,90,917	0/0:32,0:32:90.19:0,90,912	0/0:11,0:10:30.07:0,30,306	0/0:19,0:18:45.09:0,45,459	0/0:11,0:11:33.07:0,33,336	0/0:21,0:21:63.13:0,63,638	0/0:37,0:37:99:0,108,1102	0/0:15,0:15:42.10:0,42,428
chr10	2989745	.	TA	T	4839.25	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=14.273;DP=585;FS=5.789;HRun=8;HaplotypeScore=62.9984;InbreedingCoeff=0.9988;MQ=71.88;MQ0=1;MQRankSum=-1.701;QD=25.20;ReadPosRankSum=0.604;VQSLOD=5.6810;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,23:25:60.09:579,60,0	0/0:11,0:11:33.10:0,33,399	0/0:14,0:13:33.10:0,33,392	0/0:12,0:11:27.08:0,27,318	0/0:22,0:22:63.19:0,63,761	0/0:22,0:22:63.19:0,63,761	0/0:12,0:12:36.11:0,36,435	1/1:0,29:29:87.13:835,87,0	0/0:25,0:25:69.21:0,69,826	0/0:32,0:32:93.29:0,93,1123	0/0:22,0:22:57.17:0,57,679	0/0:17,0:17:39.11:0,39,462	0/0:19,0:19:57.17:0,57,688	0/0:19,0:19:54.15:0,54,639	1/1:3,15:18:42.06:406,42,0	0/0:10,0:10:30.09:0,30,362	0/0:19,0:19:51.16:0,51,616	1/1:0,26:26:66.11:637,66,0	0/0:20,0:20:51.16:0,51,616	0/0:40,0:40:99:0,111,1326	0/0:15,0:15:45.11:0,45,520	0/0:18,0:18:42.13:0,42,507	0/0:29,0:29:43.28:0,43,799	0/0:15,0:15:45.14:0,45,543	1/1:2,15:17:42.07:406,42,0	1/1:2,29:31:20.64:760,21,0	1/1:1,31:32:93.15:898,93,0	1/1:3,11:14:33.05:319,33,0
chr10	2990339	.	AT	A	3602.04	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=15.343;DP=715;FS=0.990;HRun=7;HaplotypeScore=78.5357;InbreedingCoeff=0.9689;MQ=75.78;MQ0=0;MQRankSum=-6.462;QD=16.45;ReadPosRankSum=2.952;VQSLOD=3.6766;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:37,0:37:40.38:284,40,0	0/0:9,0:9:27.07:0,27,327	0/0:35,0:34:83.47:0,83,999	0/0:33,0:33:74.98:0,75,845	0/0:33,0:33:99:0,99,1219	0/0:26,0:26:75.24:0,75,943	0/0:25,0:25:72.22:0,72,893	1/1:17,0:17:4.87:73,5,0	0/0:30,0:30:90.25:0,90,1101	0/0:23,0:23:54.16:0,54,660	0/0:17,0:17:48.15:0,48,603	0/0:20,0:20:60.18:0,60,742	0/0:25,0:25:72.23:0,72,900	0/0:23,0:23:63.18:0,63,768	1/1:28,0:28:12.15:169,12,0	0/0:21,0:21:63.15:0,63,752	1/1:1,34:35:96.22:979,96,0	1/1:17,0:17:19.49:139,19,0	0/0:25,0:25:75.19:0,75,877	0/0:20,0:20:60.18:0,60,743	0/0:38,0:38:99:0,105,1309	0/0:32,0:32:96.31:0,96,1205	0/0:27,0:27:78.24:0,78,970	0/0:33,1:34:68.64:0,69,1122	1/1:14,0:14:32.29:117,32,0	1/1:5,26:31:43.54:738,44,0	1/1:1,33:34:96.22:980,96,0	1/1:0,6:5:12.03:122,12,0
chr10	2990346	.	TC	T	3689.36	PASS	AB=1.000;AC=16;AF=0.286;AN=56;BaseQRankSum=15.213;DP=733;FS=0.658;HRun=4;HaplotypeScore=80.1887;InbreedingCoeff=0.8325;MQ=75.56;MQ0=0;MQRankSum=-2.361;QD=17.16;ReadPosRankSum=3.760;VQSLOD=3.0237;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,36:38:96.29:1147,96,0	0/0:9,0:9:27.08:0,27,355	0/0:41,0:39:99:0,112,1302	0/0:33,0:32:80.44:0,80,984	0/0:34,0:34:99:0,99,1336	0/0:28,0:28:84.22:0,84,1080	0/0:30,0:30:84.20:0,84,1064	1/1:0,14:14:42.10:481,42,0	0/0:31,0:31:90.27:0,90,1198	0/0:21,0:21:60.17:0,60,767	0/0:18,0:18:54.11:0,54,698	0/0:21,0:21:63.20:0,63,846	0/0:25,0:25:75.20:0,75,984	0/0:20,0:20:57.19:0,57,779	1/1:0,26:26:66.20:788,66,0	0/0:23,0:23:60.17:0,60,788	1/1:36,0:36:16.90:113,17,0	1/1:1,15:16:42.13:501,42,0	0/0:25,0:25:63.19:0,63,831	0/0:21,0:21:60.18:0,60,788	0/0:40,0:40:99:0,117,1498	0/0:34,0:34:99:0,102,1359	0/0:29,0:29:81.24:0,81,1072	0/0:35,0:35:88.21:0,88,1192	1/1:0,13:13:39.12:467,39,0	0/1:29,0:29:29.89:30,0,55	1/1:36,0:36:41.89:149,42,0	0/1:7,0:6:11.53:13,0,12
chr10	2992227	.	CAGAGAGAGAGAG	C	135.02	PASS	AB=0.907;AC=8;AF=0.167;AN=48;BaseQRankSum=1.818;DP=454;FS=5.433;HRun=0;HaplotypeScore=121.2323;InbreedingCoeff=0.2643;MQ=37.22;MQ0=79;MQRankSum=-0.296;QD=1.05;ReadPosRankSum=1.367;VQSLOD=2.1032;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:33,0:24:3.01:85,3,0	0/0:7,0:7:6.12:0,6,23	./.	./.	./.	0/0:16,0:11:0.71:0,1,2	0/0:19,0:17:3.48:0,3,102	0/0:12,0:12:2.66:0,3,17	0/0:12,0:9:1.82:0,2,5	0/0:20,0:15:21.07:0,21,655	./.	0/0:16,0:15:2.88:0,3,127	0/0:11,0:11:17.08:0,17,637	0/0:15,0:13:9.03:0,9,312	0/1:17,1:15:0.27:0,0,0	0/0:19,0:17:3.46:0,3,149	1/1:13,0:12:3.01:46,3,0	0/0:12,0:6:0.47:0,0,1	0/0:14,0:10:14.17:0,14,394	0/0:11,0:11:0.47:0,0,1	0/0:35,0:29:18.41:0,18,631	0/0:19,0:18:9.03:0,9,385	0/0:19,0:18:3.01:0,3,55	0/0:22,0:14:9.50:0,10,225	0/1:9,8:15:0:0,0,0	0/1:27,0:25:39.96:40,0,283	0/0:22,0:18:12.04:0,12,343	0/1:17,0:8:20.81:68,0,21
chr10	2992508	.	TA	T	2433.68	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=11.234;DP=543;FS=0.930;HRun=5;HaplotypeScore=66.1067;InbreedingCoeff=0.9915;MQ=77.18;MQ0=0;MQRankSum=-1.737;QD=26.17;ReadPosRankSum=-0.583;VQSLOD=2.8988;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,27:28:75.20:834,75,0	0/0:8,0:8:21.07:0,21,287	0/0:19,0:19:28.15:0,28,637	0/0:20,0:20:57.08:0,57,703	0/0:29,0:29:81.25:0,81,1079	0/0:17,0:17:48.14:0,48,627	0/0:17,0:17:48.16:0,48,657	1/1:3,20:23:57.08:608,57,0	0/0:17,0:17:45.15:0,45,615	0/0:27,0:27:72.24:0,72,985	0/0:22,0:22:57.19:0,57,778	0/0:13,0:13:36.12:0,36,492	0/0:17,0:17:45.15:0,45,615	0/0:16,0:16:45.13:0,45,597	1/1:2,11:13:30.08:333,30,0	0/0:20,0:20:60.20:0,60,821	0/0:18,0:18:51.14:0,51,678	1/1:0,13:13:33.09:367,33,0	0/0:23,0:23:66.20:0,66,872	0/0:28,0:28:78.26:0,78,1067	0/0:14,0:14:42.14:0,42,575	0/0:27,0:27:78.25:0,78,1051	0/0:21,0:21:54.18:0,54,732	0/0:7,0:7:12.04:0,12,164	1/1:1,15:16:42.11:467,42,0	0/0:31,0:31:93.31:0,93,1271	0/0:17,0:17:51.15:0,51,668	0/0:22,0:22:54.10:0,54,697
chr10	2993821	.	TAAACACACACAC	T	2003.45	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=1.665;DP=556;FS=2.408;HRun=0;HaplotypeScore=159.5141;InbreedingCoeff=0.9034;MQ=67.10;MQ0=10;MQRankSum=-2.790;QD=12.93;ReadPosRankSum=0.626;VQSLOD=2.8496;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:26,2:27:37.31:388,37,0	0/0:11,0:11:27.96:0,28,899	0/0:38,0:27:55.52:0,56,757	0/0:40,0:28:67.30:0,67,775	0/0:21,0:20:44.98:0,45,1056	0/0:16,0:16:44.12:0,44,1093	0/0:17,0:17:45.10:0,45,1169	1/1:19,0:18:20.47:405,20,0	0/0:15,0:15:45.08:0,45,1349	0/0:21,0:21:57.12:0,57,1348	0/0:17,0:17:41.10:0,41,1328	0/0:4,0:4:12.03:0,12,361	0/0:9,0:9:27.05:0,27,928	0/0:26,0:26:50.78:0,51,734	1/1:0,0:21:6.02:190,6,0	0/0:20,0:20:60.10:0,60,1487	1/1:2,0:25:5.89:110,6,0	1/1:9,0:8:17.91:139,18,0	0/0:21,0:21:59.76:0,60,757	0/0:17,0:17:47.83:0,48,1048	0/0:35,0:34:86.52:0,87,2261	0/0:26,0:26:68.24:0,68,1665	0/0:19,0:18:40.02:0,40,796	0/0:28,0:26:57.07:0,57,1127	1/1:0,0:11:3.01:44,3,0	1/1:12,2:14:25.80:433,26,0	1/1:0,18:19:8.90:263,9,0	1/1:0,9:9:6.02:229,6,0
chr10	2993823	.	AAC	A	454.42	PASS	AB=0.924;AC=26;AF=0.542;AN=48;BaseQRankSum=5.056;DP=582;FS=10.859;HRun=0;HaplotypeScore=81.3511;InbreedingCoeff=0.1352;MQ=65.20;MQ0=11;MQRankSum=-0.329;QD=1.28;ReadPosRankSum=3.177;VQSLOD=0.4941;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:29:5.38:33,5,0	0/1:12,0:12:16.97:17,0,140	./.	./.	0/1:21,0:20:13.91:14,0,169	0/1:16,1:17:20.55:21,0,66	0/1:19,1:20:66.82:67,0,91	0/0:21,0:20:5.11:0,5,26	0/0:16,0:16:16.67:0,17,240	0/0:22,0:22:18.91:0,19,211	0/0:17,0:17:15.05:0,15,212	0/0:5,0:5:9.01:0,9,111	0/1:10,2:12:37.43:37,0,176	1/1:17,0:28:5.68:29,6,0	1/1:21,0:21:5.68:28,6,0	0/1:19,1:22:10.36:10,0,203	1/1:24,0:24:5.68:28,6,0	./.	1/1:18,0:18:2.94:32,3,0	0/0:22,0:22:15.03:0,15,189	0/1:40,0:42:7.55:8,0,221	0/0:22,3:25:4.75:0,5,195	1/1:14,2:16:7.83:69,8,0	0/1:15,13:26:5.89:142,0,6	./.	1/1:14,0:14:5.68:28,6,0	1/1:19,0:18:1.30:21,1,0	1/1:9,0:9:5.68:28,6,0
chr10	2994883	.	AAAGATC	A	2321.90	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.212;DP=464;FS=3.219;HRun=0;HaplotypeScore=103.8844;InbreedingCoeff=0.9802;MQ=80.71;MQ0=1;MQRankSum=-9.411;QD=47.39;ReadPosRankSum=1.567;VQSLOD=3.6092;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:67.39:0,67,2319	0/0:10,0:10:30.10:0,30,1058	0/0:19,0:19:48.12:0,48,1008	0/0:11,0:10:26.68:0,27,724	0/0:24,0:24:72.25:0,72,2528	0/0:19,0:19:54.18:0,54,1896	0/0:6,0:6:15.05:0,15,541	0/0:30,0:30:87.30:0,87,3009	0/0:12,0:12:36.12:0,36,1229	0/0:30,0:30:87.30:0,87,3023	0/0:21,0:21:60.21:0,60,2087	0/0:12,0:12:33.11:0,33,1127	0/0:13,0:13:36.11:0,36,1110	0/0:10,0:10:27.09:0,27,973	0/0:18,0:18:51.17:0,51,1763	0/0:18,0:18:54.19:0,54,1851	0/0:22,0:22:66.23:0,66,2357	0/0:17,0:17:51.18:0,51,1825	0/0:20,0:19:51.17:0,51,1721	0/0:18,0:18:54.19:0,54,1836	0/0:5,0:5:15.05:0,15,540	0/0:5,0:5:15.05:0,15,540	0/0:11,0:11:33.11:0,33,1116	0/0:10,0:10:27.09:0,27,860	0/0:29,0:29:87.30:0,87,3067	1/1:3,14:17:41.93:915,42,0	1/1:2,17:19:45.15:1080,45,0	1/1:5,8:13:21.07:469,21,0
chr10	2996150	.	T	TG	1479.99	PASS	AB=0.574;AC=5;AF=0.089;AN=56;BaseQRankSum=9.259;DP=580;FS=5.381;HRun=7;HaplotypeScore=71.1228;InbreedingCoeff=0.7925;MQ=82.50;MQ0=0;MQRankSum=-3.783;QD=22.42;ReadPosRankSum=1.373;VQSLOD=3.7766;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:72.74:0,73,719	0/0:6,0:6:15.01:0,15,139	0/0:24,0:21:43.95:0,44,437	0/0:22,0:21:33.26:0,33,324	0/0:22,0:22:60.09:0,60,576	0/0:32,0:32:81.13:0,81,782	0/0:18,0:18:42.06:0,42,406	0/0:25,0:25:54.04:0,54,510	0/0:30,0:30:87.14:0,87,839	0/0:17,0:17:45.07:0,45,434	0/0:12,0:12:24.03:0,24,232	0/0:15,0:15:33.04:0,33,318	0/0:23,0:23:60.09:0,60,579	0/0:24,0:24:63.10:0,63,608	0/0:22,0:22:57.09:0,57,550	0/0:16,0:16:45.07:0,45,433	0/0:21,0:20:48.08:0,48,463	0/0:14,0:14:33.05:0,33,319	0/0:22,0:22:51.05:0,51,485	0/0:11,0:11:33.05:0,33,319	0/0:34,0:34:84.13:0,84,811	0/0:9,0:9:21.03:0,21,203	0/0:15,0:15:45.07:0,45,434	0/0:30,0:30:81.13:0,81,782	0/0:10,0:10:30.05:0,30,290	0/1:7,20:27:10.62:668,0,11	1/1:2,18:20:42.13:507,42,0	1/1:3,16:19:36.11:435,36,0
chr10	2996167	.	GAGAC	G	725.98	PASS	AB=0.942;AC=4;AF=0.071;AN=56;BaseQRankSum=5.240;DP=598;FS=9.865;HRun=0;HaplotypeScore=105.8144;InbreedingCoeff=0.4137;MQ=71.86;MQ0=2;MQRankSum=3.150;QD=9.81;ReadPosRankSum=0.179;VQSLOD=2.3103;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:17,24:41:51.06:809,51,0	0/0:6,0:6:15.05:0,15,358	0/0:28,0:20:12.04:0,12,207	0/0:26,0:18:9.01:0,9,130	0/0:19,0:19:30.09:0,30,666	0/0:28,0:28:45.11:0,45,1000	0/0:20,0:20:42.13:0,42,908	0/0:30,0:30:45.15:0,45,1004	0/0:33,0:33:72.25:0,72,1680	0/0:23,0:23:45.15:0,45,974	0/0:10,0:10:24.08:0,24,547	0/0:13,0:13:39.13:0,39,929	0/0:24,0:24:36.12:0,36,854	0/0:22,0:22:45.15:0,45,1075	0/0:26,0:26:51.18:0,51,1177	0/1:17,1:18:11.49:11,0,725	0/0:22,0:21:8.22:0,8,75	0/0:11,0:11:15.05:0,15,333	0/0:21,0:21:27.09:0,27,645	0/0:12,0:12:30.02:0,30,586	0/0:34,1:35:12.58:0,13,1240	0/0:10,0:10:24.08:0,24,565	0/0:16,0:16:24.08:0,24,567	0/0:32,0:32:63.17:0,63,1396	0/0:12,0:12:21.07:0,21,480	0/0:25,0:25:39.13:0,39,897	0/0:20,0:20:42.14:0,42,981	0/1:14,1:15:17.57:18,0,489
chr10	2999108	.	G	GA	1971.48	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=-9.330;DP=591;FS=0.000;HRun=10;HaplotypeScore=60.4498;InbreedingCoeff=0.8270;MQ=69.30;MQ0=0;MQRankSum=1.095;QD=16.43;ReadPosRankSum=-4.286;VQSLOD=2.6411;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:86.84:0,87,709	0/0:9,0:9:26.93:0,27,216	0/1:16,0:14:16.07:16,0,16	0/0:19,0:15:25.65:0,26,186	0/0:17,0:17:43.77:0,44,350	0/0:23,0:23:62.92:0,63,516	0/0:18,0:18:44.76:0,45,360	1/1:11,36:47:99:1065,104,0	0/0:13,0:13:5.16:0,5,175	0/0:30,0:30:74.89:0,75,615	0/0:18,0:17:47.67:0,48,381	0/0:17,0:17:44.93:0,45,369	0/0:17,0:17:38.93:0,39,320	0/0:19,2:21:21.95:0,22,386	1/1:5,16:21:17.47:392,17,0	0/0:15,0:15:13.33:0,13,267	0/0:24,0:24:43.33:0,43,485	1/1:3,13:17:14.76:341,15,0	0/0:24,0:26:60.76:0,61,479	0/0:20,0:21:54.35:0,54,433	0/0:16,1:17:13.30:0,13,313	0/0:15,0:16:34.79:0,35,265	0/0:23,0:24:55.97:0,56,449	0/0:13,0:13:38.96:0,39,320	1/1:8,10:18:30.08:319,30,0	0/0:26,1:28:35.95:0,36,491	0/0:33,0:34:85.92:0,86,695	0/0:16,0:16:47.95:0,48,393
chr10	3000164	.	TGATA	T	2120.04	PASS	AB=1.000;AC=27;AF=0.563;AN=48;BaseQRankSum=3.650;DP=586;FS=0.000;HRun=0;HaplotypeScore=115.4370;InbreedingCoeff=0.6249;MQ=72.15;MQ0=4;MQRankSum=-2.807;QD=6.88;ReadPosRankSum=-0.474;VQSLOD=2.4928;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:37,0:36:10.47:87,10,0	1/1:9,3:11:6.02:90,6,0	./.	./.	0/0:27,1:28:2.93:0,3,779	1/1:14,5:19:12.04:181,12,0	0/0:19,0:19:2.68:0,3,69	./.	1/1:14,12:27:10.08:369,10,0	0/0:15,0:22:20.96:0,21,284	0/0:19,0:25:29.10:0,29,463	1/1:7,6:13:12.04:181,12,0	./.	0/1:12,0:12:15.87:16,0,189	1/1:11,0:16:18.01:165,18,0	0/0:21,0:21:27.05:0,27,490	1/1:21,0:21:3:28,3,0	0/1:15,0:15:0:0,0,0	0/0:23,0:23:9.03:0,9,167	1/1:15,16:31:36:481,36,0	1/1:19,0:19:5.99:50,6,0	0/0:20,0:20:30.06:0,30,538	1/1:15,10:25:11.90:181,12,0	1/1:7,2:9:6.02:90,6,0	1/1:14,0:18:14.98:128,15,0	0/0:29,0:31:38.01:0,38,720	0/1:34,0:34:53.84:249,0,54	0/0:15,0:15:27.09:0,27,469
chr10	3000167	.	TAGATAG	T	233.38	PASS	AB=0.854;AC=3;AF=0.054;AN=56;BaseQRankSum=6.591;DP=581;FS=10.472;HRun=0;HaplotypeScore=142.8598;InbreedingCoeff=-0.0558;MQ=70.58;MQ0=6;MQRankSum=-4.945;QD=3.33;ReadPosRankSum=0.452;VQSLOD=1.9212;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:38,0:37:11.06:11,0,630	0/0:12,0:11:29.68:0,30,383	0/0:21,0:19:51.15:0,51,705	0/0:13,0:12:35.15:0,35,460	0/0:29,0:29:81.03:0,81,2000	0/0:18,0:18:44.30:0,44,565	0/0:18,0:18:51.16:0,51,790	0/0:29,0:27:78.16:0,78,1043	0/0:27,0:27:37.08:0,37,641	0/0:22,0:22:60.20:0,60,1209	0/0:25,0:25:71.27:0,71,1469	0/0:13,0:13:32.26:0,32,351	0/0:7,0:7:20.90:0,21,286	0/0:12,0:12:36.12:0,36,697	0/1:11,5:16:99:204,0,147	0/0:20,0:20:57.19:0,57,1335	0/0:22,0:22:18.42:0,18,394	0/0:15,0:15:37.92:0,38,287	0/0:25,0:24:63.50:0,64,1037	0/0:28,0:29:76.07:0,76,818	0/0:19,0:19:57.18:0,57,791	0/0:21,0:21:63.21:0,63,1602	0/0:25,0:25:56.34:0,56,694	0/0:9,0:9:20.56:0,21,235	0/1:12,0:16:99:116,0,211	0/0:30,0:30:90.31:0,90,2105	0/0:34,0:33:87.11:0,87,1249	0/0:16,0:16:48.16:0,48,1282
chr10	3000216	.	AGATAGATAGATT	A	932.78	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=3.031;DP=527;FS=10.729;HRun=0;HaplotypeScore=177.6278;InbreedingCoeff=0.2972;MQ=59.32;MQ0=10;MQRankSum=-4.093;QD=6.52;ReadPosRankSum=-1.461;VQSLOD=1.9695;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,23:26:12.01:421,12,0	0/0:14,0:13:35.99:0,36,545	0/0:12,0:10:21.03:0,21,247	0/0:5,0:5:6.09:0,6,109	0/0:30,0:30:87.19:0,87,3140	0/0:20,0:20:47.97:0,48,649	0/0:13,0:13:29.56:0,30,507	0/0:24,0:19:50.98:0,51,468	0/0:19,0:19:43.65:0,44,916	0/0:23,0:22:66.14:0,66,1751	0/0:16,0:16:44.15:0,44,1530	0/0:15,0:15:36.08:0,36,670	0/0:10,0:10:30.03:0,30,402	0/0:17,0:17:48.06:0,48,1034	0/1:21,0:21:1.11:1,0,339	0/0:23,0:23:66.06:0,66,1833	1/1:0,0:14:3.01:85,3,0	0/1:14,0:14:2.28:2,0,213	0/0:19,0:17:38.03:0,38,679	0/0:35,0:35:83.91:0,84,1789	0/0:11,0:11:27.03:0,27,483	0/0:20,0:20:54.12:0,54,2005	0/0:21,0:21:42.01:0,42,658	0/0:7,0:7:11.77:0,12,219	0/1:22,0:22:99:389,0,264	0/1:27,0:27:99:141,0,1865	0/0:30,0:29:42.11:0,42,948	0/1:19,0:17:23.84:24,0,1505
chr10	3000224	.	AGATT	A	1058.91	PASS	AB=1.000;AC=14;AF=0.250;AN=56;BaseQRankSum=7.993;DP=539;FS=2.173;HRun=0;HaplotypeScore=104.3684;InbreedingCoeff=0.1244;MQ=65.20;MQ0=6;MQRankSum=-2.902;QD=4.66;ReadPosRankSum=2.021;VQSLOD=2.1812;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:23:11.99:134,12,0	0/0:13,0:12:0.44:0,0,214	0/0:18,0:15:35.15:0,35,389	0/0:7,0:7:9.07:0,9,130	0/0:31,0:31:57.90:0,58,1221	0/1:19,0:19:23.93:24,0,289	0/0:10,0:10:30.01:0,30,314	0/0:27,0:24:66:0,66,608	0/1:21,0:21:99:120,0,172	0/0:26,0:25:69.07:0,69,859	0/0:17,0:17:44.11:0,44,680	0/1:15,0:15:36.94:37,0,182	0/0:14,0:14:26.36:0,26,328	0/0:16,0:16:44.99:0,45,541	0/0:21,0:21:7.43:0,7,335	0/0:27,0:27:72.04:0,72,946	1/1:14,0:14:3:28,3,0	0/0:14,0:14:41.80:0,42,326	0/0:20,0:19:32.88:0,33,387	0/1:35,0:35:99:112,0,412	0/0:9,0:9:15.94:0,16,133	0/0:19,0:19:48.06:0,48,807	0/1:24,0:24:24.93:25,0,307	0/1:7,0:7:21.52:22,0,54	0/0:23,0:23:24.99:0,25,368	0/1:22,0:22:99:215,0,418	1/1:4,25:29:7.85:455,8,0	0/1:18,0:16:46.90:47,0,290
chr10	3000227	.	T	TAGA	368.40	PASS	AB=0.917;AC=4;AF=0.071;AN=56;BaseQRankSum=3.885;DP=538;FS=5.043;HRun=0;HaplotypeScore=98.2454;InbreedingCoeff=-0.0850;MQ=65.27;MQ0=5;MQRankSum=0.484;QD=4.49;ReadPosRankSum=-1.162;VQSLOD=1.9336;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:11.95:0,12,90	0/0:13,0:12:36.12:0,36,525	0/0:19,0:16:41.42:0,41,613	0/0:7,0:7:9.25:0,9,169	0/0:32,0:32:65.27:0,65,1321	0/0:19,0:19:54.18:0,54,779	0/0:11,0:11:33.10:0,33,484	0/0:29,0:27:75.06:0,75,1041	0/0:21,0:21:51.17:0,51,705	0/1:27,0:26:28.56:29,0,737	0/1:16,0:16:53.71:54,0,411	0/0:16,0:16:39.13:0,39,557	0/0:14,0:14:42.14:0,42,622	0/0:16,0:16:48.15:0,48,732	0/0:21,0:21:54.13:0,54,753	0/0:25,0:25:75.25:0,75,1192	0/0:14,0:14:2.97:0,3,20	0/0:15,0:15:42.14:0,42,627	0/0:19,0:19:38.06:0,38,631	0/0:35,0:35:90.25:0,90,1257	0/0:8,0:8:24.07:0,24,338	0/0:17,0:17:51.16:0,51,810	0/0:24,0:24:54.07:0,54,782	0/0:8,0:8:18.49:0,18,230	0/0:22,0:22:54.13:0,54,748	0/1:21,0:21:36.54:37,0,306	0/0:28,0:28:32.93:0,33,268	0/1:9,9:16:89.32:359,0,89
chr10	3000228	.	T	TA	51.58	PASS	AB=0.654;AC=1;AF=0.018;AN=56;BaseQRankSum=3.963;DP=533;FS=1.318;HRun=0;HaplotypeScore=80.8061;InbreedingCoeff=0.1106;MQ=65.39;MQ0=4;MQRankSum=1.111;QD=3.03;ReadPosRankSum=0.756;VQSLOD=3.1422;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:9.27:0,9,39	0/0:13,0:12:36.12:0,36,498	0/0:19,0:16:42.13:0,42,566	0/0:7,0:7:17.98:0,18,195	0/0:31,0:31:90.11:0,90,1206	0/0:19,0:19:54.18:0,54,740	0/0:11,0:11:33.10:0,33,446	0/0:30,0:28:78.17:0,78,1018	0/0:21,0:21:51.17:0,51,676	0/0:26,0:25:72.19:0,72,947	0/0:16,0:16:45.12:0,45,567	0/0:16,0:16:39.11:0,39,535	0/0:15,0:15:42.14:0,42,586	0/0:15,0:15:45.15:0,45,628	0/0:21,0:21:61.88:0,62,745	0/0:25,0:25:75.25:0,75,1049	0/0:14,0:14:2.22:0,2,7	0/0:16,0:16:45.12:0,45,608	0/0:17,0:17:47.27:0,47,583	0/0:33,0:33:96.23:0,96,1255	0/0:8,0:8:24.08:0,24,335	0/0:18,0:18:51.17:0,51,713	0/0:24,0:24:54.17:0,54,742	0/0:8,0:8:17.51:0,18,221	0/0:22,0:22:60.04:0,60,737	0/0:20,0:20:55.18:0,55,318	0/0:27,0:27:24.34:0,24,90	0/1:8,9:16:48.84:126,0,49
chr10	3000704	.	GA	G	7292.78	PASS	AB=0.766;AC=39;AF=0.696;AN=56;BaseQRankSum=-17.917;DP=521;FS=87.247;HRun=2;HaplotypeScore=386.4846;InbreedingCoeff=-0.2607;MQ=37.58;MQ0=0;MQRankSum=0.208;QD=14.02;ReadPosRankSum=-7.729;VQSLOD=0.6649;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:15,8:23:0.48:195,0,0	0/1:8,4:12:12.37:119,0,12	1/1:1,2:3:8.97:70,9,0	0/0:1,0:1:2.68:0,3,11	1/1:10,15:25:7.15:366,7,0	1/1:14,11:25:23.28:403,23,0	0/1:10,6:16:5.46:179,0,5	1/1:2,30:32:87.24:1044,87,0	0/1:17,5:22:33.04:133,0,33	1/1:17,13:30:22.03:430,22,0	0/1:11,8:19:8.06:209,0,8	0/1:15,8:23:22.94:271,0,23	0/1:9,7:16:6.75:231,0,7	0/1:21,8:29:50.85:203,0,51	0/1:18,13:31:13.26:404,0,13	1/1:12,13:25:11.81:419,12,0	0/1:9,4:13:14.13:114,0,14	1/1:3,5:8:13.35:181,13,0	1/1:8,9:17:35.11:386,35,0	1/1:12,17:28:14.68:497,15,0	1/1:4,5:9:10.58:136,11,0	0/1:13,6:19:10.44:204,0,10	0/1:8,7:14:26.84:112,0,27	0/1:7,2:9:12.69:40,0,13	0/1:9,3:12:2.90:59,0,3	1/1:11,13:24:33.54:458,34,0	1/1:18,10:28:13.02:414,13,0	0/1:6,0:6:5.71:14,0,6
chr10	3001042	.	GAAACCAGCCGCTGGTGAACCATCCACCCCTTCACAGA	G	2046.81	PASS	AB=1.000;AC=10;AF=0.179;AN=56;BaseQRankSum=5.574;DP=451;FS=4.759;HRun=0;HaplotypeScore=398.9605;InbreedingCoeff=0.5782;MQ=80.63;MQ0=1;MQRankSum=-5.716;QD=23.00;ReadPosRankSum=5.568;VQSLOD=0.8208;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:59.93:0,60,1349	0/0:13,0:13:38.95:0,39,599	0/0:20,0:19:32.92:0,33,575	0/0:22,0:22:49.67:0,50,600	0/0:14,0:14:23.84:0,24,792	0/0:12,0:11:23.97:0,24,333	0/0:24,0:24:60.16:0,60,1454	0/0:23,0:23:48.10:0,48,719	0/0:11,0:11:30.08:0,30,570	0/0:12,0:12:27.02:0,27,522	0/0:9,0:9:21.07:0,21,510	0/1:10,0:10:99:106,0,295	0/0:19,0:19:42.03:0,42,1050	0/0:19,0:19:48.07:0,48,1649	0/1:20,0:20:1.29:268,0,1	0/0:17,0:17:39.11:0,39,1249	0/0:28,0:28:81.16:0,81,3070	0/1:5,0:5:15.49:75,0,15	0/0:14,0:14:33.10:0,33,654	0/0:14,0:14:20.92:0,21,214	0/0:22,0:20:57.07:0,57,1410	0/0:10,0:10:21.06:0,21,779	0/0:12,0:11:20.04:0,20,447	0/0:21,0:21:60.14:0,60,1902	0/1:16,0:16:58.06:58,0,120	1/1:7,6:13:30.04:490,30,0	1/1:16,0:16:45.07:771,45,0	1/1:9,0:9:24.04:441,24,0
chr10	3001050	.	CCGCTGGTGAACCAT	C	742.15	PASS	AB=0.849;AC=4;AF=0.071;AN=56;BaseQRankSum=5.820;DP=462;FS=13.009;HRun=0;HaplotypeScore=195.0962;InbreedingCoeff=0.4576;MQ=74.42;MQ0=1;MQRankSum=-4.994;QD=20.62;ReadPosRankSum=2.091;VQSLOD=1.5882;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:75.09:0,75,4200	0/0:14,0:14:36.12:0,36,2296	0/0:18,0:16:38.62:0,39,1662	0/0:24,0:24:66.22:0,66,2119	0/0:13,0:13:27.09:0,27,1284	0/0:12,0:11:27.09:0,27,1422	0/0:26,0:26:75.26:0,75,4648	0/0:23,0:23:63.22:0,63,2853	0/0:13,0:13:39.13:0,39,2400	0/0:17,0:17:48.12:0,48,2453	0/0:9,0:9:27.09:0,27,1525	0/0:12,0:12:32.37:0,32,1570	0/0:15,0:15:45.15:0,45,2860	0/0:22,0:22:54.18:0,54,3556	1/1:5,7:12:26.87:618,27,0	0/0:16,0:16:42.13:0,42,2717	0/0:30,0:30:90.31:0,90,5706	0/1:4,2:6:99:137,0,199	0/0:14,0:13:36.12:0,36,1845	0/0:15,0:15:32.38:0,32,1137	0/0:24,0:22:57.20:0,57,3383	0/0:11,0:11:33.11:0,33,1750	0/0:10,0:9:21.07:0,21,1026	0/0:22,0:22:66.23:0,66,4071	0/1:17,1:18:99:102,0,448	0/0:12,0:12:27.09:0,27,1305	0/0:16,0:16:42.14:0,42,2281	0/0:9,0:9:24.08:0,24,1276
chr10	3001075	.	ACAGAAAAC	A	1182.99	PASS	AB=0.794;AC=5;AF=0.089;AN=56;BaseQRankSum=7.438;DP=437;FS=8.124;HRun=0;HaplotypeScore=132.0677;InbreedingCoeff=0.3365;MQ=65.78;MQ0=2;MQRankSum=-6.521;QD=29.57;ReadPosRankSum=1.287;VQSLOD=2.7025;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:66.23:0,66,2763	0/0:9,0:9:27.05:0,27,952	0/0:23,0:18:54.17:0,54,1844	0/0:26,0:25:66.23:0,66,2204	0/0:10,0:10:24.95:0,25,784	0/0:13,0:12:21.07:0,21,833	0/0:29,0:29:87.28:0,87,3640	0/0:23,0:23:60.21:0,60,2533	0/0:12,0:12:36.12:0,36,1560	0/0:17,0:17:42.13:0,42,1749	0/0:10,0:10:30.10:0,30,1052	0/1:15,0:15:42.46:42,0,1495	0/0:14,0:14:36.12:0,36,1539	0/0:21,0:21:60.21:0,60,2540	1/1:0,11:11:33.11:823,33,0	0/0:14,0:14:33.11:0,33,1396	0/0:31,0:31:90.31:0,90,3807	0/1:2,2:4:99:157,0,121	0/0:13,0:12:36.08:0,36,1410	0/0:13,0:12:30.10:0,30,1138	0/0:21,0:19:54.12:0,54,1980	0/0:15,0:15:42.10:0,42,1729	0/0:10,0:9:27.09:0,27,1120	0/0:21,0:21:63.22:0,63,2693	0/1:6,4:10:99:284,0,566	0/0:7,0:7:18.06:0,18,603	0/0:10,0:10:24.08:0,24,875	0/0:8,0:8:21.07:0,21,741
chr10	3001294	.	A	ACAGAAAAC	2926.89	PASS	AB=0.733;AC=5;AF=0.089;AN=56;BaseQRankSum=5.560;DP=537;FS=0.795;HRun=0;HaplotypeScore=121.7368;InbreedingCoeff=0.7217;MQ=55.37;MQ0=14;MQRankSum=-8.269;QD=73.17;ReadPosRankSum=-0.523;VQSLOD=3.8166;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:23:51.17:0,51,1439	0/0:8,0:8:12.77:0,13,406	0/0:16,0:6:18.06:0,18,453	0/0:21,0:7:18.03:0,18,383	0/0:10,0:9:15.05:0,15,424	0/0:17,0:16:24.55:0,25,641	0/0:21,0:17:36.12:0,36,1018	0/0:23,0:21:51.14:0,51,1320	0/0:26,0:25:54.14:0,54,1462	0/0:19,0:18:42.14:0,42,1119	0/0:7,0:7:9.03:0,9,255	0/0:21,0:20:32.93:0,33,874	0/0:14,0:14:33.07:0,33,800	0/0:30,0:30:68.81:0,69,1877	1/1:1,6:7:21.07:856,21,0	0/0:20,0:20:51.17:0,51,1404	0/0:34,0:32:63.19:0,63,1721	1/1:2,8:11:24.08:963,24,0	0/0:15,0:14:35.78:0,36,958	0/0:13,0:11:21.07:0,21,593	0/0:58,0:41:81.28:0,81,2223	0/0:13,0:10:18.06:0,18,509	0/0:10,0:10:15.05:0,15,412	0/0:21,0:20:17.90:0,18,497	0/1:14,7:21:99:1236,0,213	0/0:25,0:22:48.16:0,48,1356	0/0:25,0:24:68.74:0,69,1870	0/0:6,0:5:15.02:0,15,360
chr10	3001637	.	GCA	G	532.34	PASS	AB=0.895;AC=16;AF=0.308;AN=52;BaseQRankSum=6.893;DP=450;FS=0.000;HRun=0;HaplotypeScore=69.8421;InbreedingCoeff=-0.2928;MQ=53.93;MQ0=12;MQRankSum=1.147;QD=2.02;ReadPosRankSum=1.888;VQSLOD=1.4410;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:25:1.28:1,0,12	0/0:8,0:8:0.93:0,1,41	./.	./.	0/1:12,0:10:3.44:3,0,109	0/0:18,3:20:12.35:0,12,251	0/0:29,0:26:0.46:0,0,167	0/0:15,0:13:15.32:0,15,102	0/0:12,4:16:18.01:0,18,222	0/0:15,0:15:7.27:0,7,93	0/0:8,0:8:12.04:0,12,176	0/1:16,1:18:22.71:23,0,244	0/1:10,3:13:47.15:47,0,156	0/1:10,3:13:14.80:15,0,158	0/1:14,4:20:5.03:98,0,5	0/0:12,0:12:6.34:0,6,308	0/1:21,0:21:16.45:155,0,16	1/1:9,4:14:8.03:136,8,0	0/1:15,0:14:36.04:37,0,36	0/0:9,0:9:6.02:0,6,87	0/1:31,1:30:46.98:47,0,405	0/1:9,3:12:23.77:24,0,81	0/0:14,0:14:6.95:0,7,233	0/1:23,2:25:35.59:36,0,321	0/1:12,3:16:24.78:37,0,25	0/1:14,3:17:10.40:10,0,170	0/0:21,1:21:0.26:0,0,326	0/1:10,0:10:2.32:2,0,142
chr10	3001678	.	CAT	C	458.34	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=8.846;DP=555;FS=1.212;HRun=0;HaplotypeScore=77.6610;InbreedingCoeff=0.5840;MQ=70.53;MQ0=12;MQRankSum=0.977;QD=13.10;ReadPosRankSum=3.515;VQSLOD=3.5974;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:25:48.35:0,48,401	0/0:6,0:6:14.89:0,15,146	0/0:28,0:17:30.51:0,31,420	0/0:35,0:25:45.32:0,45,478	0/0:16,0:14:41.22:0,41,365	0/0:29,0:28:62.68:0,63,695	0/0:24,0:22:59.20:0,59,638	0/0:25,0:25:69.25:0,69,600	0/0:23,0:23:53.96:0,54,618	0/0:18,0:18:50.95:0,51,488	0/0:12,0:12:29.81:0,30,344	0/0:20,0:20:47.35:0,47,620	0/0:21,0:21:38.23:0,38,542	0/0:20,0:20:41.57:0,42,521	0/0:15,0:15:4.04:0,4,153	0/0:17,0:17:49.30:0,49,648	1/1:15,7:22:42.88:551,43,0	0/1:13,0:13:8.09:8,0,95	0/0:17,0:17:44.36:0,44,444	0/0:15,0:14:29.96:0,30,314	0/0:42,0:40:87.60:0,88,1110	0/0:10,0:10:15.56:0,16,235	0/0:13,0:13:29.39:0,29,398	0/0:28,0:28:53.45:0,53,813	0/0:10,0:10:11.65:0,12,148	0/0:24,0:23:43.56:0,44,597	0/0:19,0:18:26.54:0,27,516	0/0:7,0:7:20.40:0,20,267
chr10	3001739	.	T	TC	4753.65	PASS	AB=0.523;AC=13;AF=0.232;AN=56;BaseQRankSum=-9.169;DP=662;FS=11.214;HRun=4;HaplotypeScore=69.4216;InbreedingCoeff=0.9396;MQ=73.56;MQ0=1;MQRankSum=-1.216;QD=34.45;ReadPosRankSum=2.439;VQSLOD=4.8806;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,116,1278	0/0:7,0:7:18.03:0,18,195	0/0:32,0:30:71.93:0,72,788	0/0:30,0:28:68.57:0,69,712	0/0:14,0:14:33.09:0,33,374	0/0:35,0:35:99:0,105,1175	0/0:24,0:24:63.16:0,63,700	0/0:21,0:21:54.14:0,54,598	0/0:30,0:30:90.23:0,90,1002	0/0:27,0:27:81.23:0,81,918	0/0:17,0:17:45.13:0,45,510	0/0:26,0:26:75.21:0,75,849	0/0:25,0:25:69.18:0,69,782	0/0:27,0:27:69.18:0,69,773	1/1:1,18:19:45.15:616,45,0	0/0:24,0:24:66.19:0,66,749	1/1:1,34:35:96.32:1312,96,0	1/1:2,19:21:29.20:673,29,0	0/0:19,0:19:51.12:0,51,559	0/0:14,0:14:33.09:0,33,374	0/0:34,0:34:83.98:0,84,923	0/0:21,0:21:57.15:0,57,636	0/0:21,0:21:57.16:0,57,646	0/0:34,0:34:99:0,99,1108	1/1:1,15:16:39.13:533,39,0	0/1:2,21:23:1.46:717,0,1	1/1:1,16:17:48.16:657,48,0	1/1:1,6:7:18.06:246,18,0
chr10	3004378	.	G	GTC	1788.85	PASS	AB=0.585;AC=5;AF=0.089;AN=56;BaseQRankSum=-6.507;DP=566;FS=1.313;HRun=0;HaplotypeScore=65.9103;InbreedingCoeff=0.7519;MQ=84.65;MQ0=0;MQRankSum=-3.307;QD=32.52;ReadPosRankSum=0.383;VQSLOD=5.2292;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,108,1405	0/0:7,0:7:18.06:0,18,234	0/0:26,0:26:48.15:0,48,603	0/0:24,0:23:45.08:0,45,529	0/0:24,0:24:63.20:0,63,818	0/0:24,0:24:60.20:0,60,780	0/0:12,0:12:36.08:0,36,438	0/0:31,0:31:66.20:0,66,845	0/0:15,0:15:45.12:0,45,568	0/0:15,0:15:45.15:0,45,585	0/0:23,0:23:66.21:0,66,858	0/0:26,0:26:75.24:0,75,975	0/0:17,0:17:48.16:0,48,624	0/0:17,0:17:51.17:0,51,663	0/0:23,0:23:60.19:0,60,780	0/0:19,0:19:57.19:0,57,742	0/0:21,0:21:60.18:0,60,765	0/0:11,0:11:30.10:0,30,390	0/0:20,0:20:45.15:0,45,585	0/0:20,0:20:60.20:0,60,780	0/0:20,0:20:51.17:0,51,663	0/0:21,0:21:45.15:0,45,585	0/0:17,0:17:51.17:0,51,663	0/0:11,0:11:24.08:0,24,312	0/0:27,0:27:72.22:0,72,921	0/1:7,17:24:17.65:841,0,18	1/1:2,22:24:54.18:918,54,0	1/1:2,3:7:9.03:153,9,0
chr10	3006316	.	G	GT	898.58	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-8.757;DP=608;FS=7.106;HRun=8;HaplotypeScore=56.7088;InbreedingCoeff=0.9572;MQ=83.37;MQ0=0;MQRankSum=-1.451;QD=28.08;ReadPosRankSum=-3.729;VQSLOD=2.5993;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:51.01:0,51,462	0/0:9,0:9:21:0,21,192	0/0:19,0:19:45.02:0,45,411	0/0:18,0:18:17.53:0,18,311	0/0:17,0:17:48.02:0,48,439	0/0:27,0:27:78.03:0,78,709	0/0:29,0:29:77.99:0,78,701	1/1:3,29:32:87.25:993,87,0	0/0:30,0:30:78.02:0,78,709	0/0:20,0:20:60.03:0,60,549	0/0:13,0:13:39.01:0,39,353	0/0:21,0:21:60.03:0,60,549	0/0:26,0:26:75.04:0,75,686	0/0:15,0:15:41.75:0,42,379	0/0:39,0:39:99:0,102,929	0/0:27,0:27:75.04:0,75,686	0/0:23,0:23:66.02:0,66,599	0/0:20,0:20:54.03:0,54,494	0/0:27,1:29:33.42:0,33,543	0/0:14,0:14:39.02:0,39,357	0/0:15,0:15:39.02:0,39,357	0/0:19,0:19:51.49:0,51,464	0/0:19,0:19:51.02:0,51,466	0/0:17,0:17:42.02:0,42,384	0/0:19,0:18:54.03:0,54,494	0/0:21,0:21:57.03:0,57,522	0/0:41,0:40:99:0,117,1070	0/0:8,0:8:11.98:0,12,105
chr10	3006534	.	GCT	G	219.83	PASS	AB=0.966;AC=15;AF=0.288;AN=52;BaseQRankSum=1.113;DP=498;FS=6.998;HRun=0;HaplotypeScore=72.8972;InbreedingCoeff=0.0161;MQ=73.29;MQ0=7;MQRankSum=0.607;QD=1.00;ReadPosRankSum=1.793;VQSLOD=0.5647;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:29:26.12:26,0,79	0/1:8,1:9:17.74:26,0,18	./.	0/0:34,0:21:0:0,0,0	0/0:10,0:10:5.99:0,6,66	0/1:24,0:25:4.30:4,0,84	0/1:19,0:18:19.99:20,0,98	0/0:24,0:23:8.62:0,9,52	0/0:15,0:16:6.87:0,7,183	0/1:21,0:21:22.45:22,0,39	0/0:14,0:14:12:0,12,119	0/0:19,0:19:3:0,3,27	0/1:21,0:21:8.38:8,0,134	0/0:14,0:14:12.01:0,12,138	1/1:12,2:14:5.75:65,6,0	0/1:14,1:15:47.10:47,0,85	0/0:20,0:20:20.56:0,21,159	0/0:10,0:10:6.01:0,6,68	0/1:25,0:26:5.08:5,0,80	0/0:12,0:11:0.47:0,0,1	0/0:30,0:30:17.98:0,18,200	0/0:11,0:13:8.99:0,9,74	1/1:7,0:8:2.85:32,3,0	0/1:15,2:17:78.36:78,0,95	1/1:13,0:14:3.86:27,4,0	0/0:15,0:15:14.90:0,15,108	0/0:15,0:15:16.10:0,16,125	./.
chr10	3006765	.	TTGC	T	2217.37	PASS	AB=0.848;AC=14;AF=0.250;AN=56;BaseQRankSum=6.952;DP=530;FS=1.149;HRun=0;HaplotypeScore=76.2286;InbreedingCoeff=0.6710;MQ=62.33;MQ0=3;MQRankSum=0.538;QD=15.19;ReadPosRankSum=3.102;VQSLOD=3.4703;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:29:49.15:49,0,376	0/0:9,0:9:18.53:0,19,365	0/0:36,0:19:26.25:0,26,381	0/0:45,0:30:49.85:0,50,696	0/0:11,0:11:5.20:0,5,120	0/0:25,0:25:39.12:0,39,703	0/0:24,0:24:51.16:0,51,986	0/0:23,0:23:39.10:0,39,673	0/0:13,0:13:33.10:0,33,632	0/0:12,0:12:15.04:0,15,211	0/0:13,0:13:14.21:0,14,184	0/0:17,1:18:2.44:0,2,765	0/0:13,0:13:27.07:0,27,463	0/0:17,0:17:36.08:0,36,563	1/1:5,14:18:33.11:470,33,0	0/0:18,0:18:42.13:0,42,803	1/1:13,24:37:51.17:726,51,0	1/1:5,11:16:30.10:424,30,0	0/0:13,0:12:21.07:0,21,410	0/0:13,0:13:21:0,21,425	0/0:30,1:31:7.27:0,7,822	0/0:6,0:6:2.42:0,2,60	0/0:12,0:12:5.19:0,5,94	0/0:32,0:32:84.04:0,84,1615	1/1:7,0:7:9.02:113,9,0	0/1:9,7:16:27.38:234,0,27	1/1:8,5:12:12.04:171,12,0	1/1:3,6:9:15.05:214,15,0
chr10	3007144	.	CTT	C	4273.41	PASS	AB=0.864;AC=19;AF=0.339;AN=56;BaseQRankSum=8.126;DP=473;FS=5.447;HRun=11;HaplotypeScore=62.1615;InbreedingCoeff=0.8977;MQ=81.98;MQ0=2;MQRankSum=-0.335;QD=21.80;ReadPosRankSum=1.696;VQSLOD=4.2069;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,10:14:24.05:255,24,0	0/0:8,0:8:18.06:0,18,277	0/0:18,0:17:24.77:0,25,251	0/1:16,1:14:6.02:6,0,138	0/0:25,0:28:74.71:0,75,1038	0/0:13,0:15:44.12:0,44,617	0/0:12,0:12:33.10:0,33,487	1/1:11,32:44:58.72:1011,59,0	0/0:13,0:14:35.61:0,36,517	0/0:16,0:17:44.59:0,45,610	0/0:18,0:18:48.12:0,48,694	0/0:13,0:13:36.10:0,36,514	0/0:9,0:10:23.52:0,24,267	0/0:11,0:11:24.08:0,24,369	1/1:1,7:8:24.05:248,24,0	0/0:13,0:13:36.12:0,36,554	1/1:3,16:19:39.09:415,39,0	1/1:3,23:26:51.22:569,51,0	0/0:16,0:19:39.09:0,39,540	0/0:31,0:32:89.78:0,90,1326	0/0:4,0:5:11.53:0,12,147	0/0:11,0:12:24.07:0,24,352	0/0:24,0:25:66.16:0,66,953	0/0:6,0:6:15.01:0,15,205	1/1:1,18:19:51.12:543,51,0	1/1:3,21:24:63.09:652,63,0	1/1:3,18:21:51.10:543,51,0	1/1:0,2:1:3.01:32,3,0
chr10	3009525	.	GT	G	2688.63	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=10.662;DP=487;FS=2.350;HRun=10;HaplotypeScore=51.3914;InbreedingCoeff=0.9535;MQ=77.04;MQ0=0;MQRankSum=-1.554;QD=20.52;ReadPosRankSum=3.607;VQSLOD=4.4922;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:60.16:0,60,664	0/0:4,0:4:12.03:0,12,133	0/0:16,0:14:29.17:0,29,263	0/0:21,0:15:16.57:0,17,124	0/0:28,0:28:75.19:0,75,819	0/0:19,0:19:52.96:0,53,570	0/0:8,0:8:21.06:0,21,232	0/0:18,0:18:45.10:0,45,483	0/0:26,0:26:72.18:0,72,787	0/0:13,1:14:4.02:0,4,272	0/0:28,0:28:81.17:0,81,882	0/0:14,0:14:42.11:0,42,465	0/0:13,0:13:36.06:0,36,385	0/0:17,0:17:39.09:0,39,423	1/1:1,13:14:29.99:260,30,0	0/0:16,1:17:22.08:0,22,472	1/1:0,17:17:50.99:443,51,0	1/1:2,13:15:38.99:339,39,0	0/0:12,0:13:35.93:0,36,379	0/0:24,0:24:63.17:0,63,697	0/0:3,0:3:9.02:0,9,100	0/0:11,0:11:27.07:0,27,299	0/0:26,1:27:46.14:0,46,728	0/0:10,0:10:30.08:0,30,332	1/1:0,25:25:68.99:599,69,0	1/1:1,21:22:62.96:542,63,0	1/1:4,24:28:56.97:495,57,0	1/1:0,10:10:24:208,24,0
chr10	3011965	.	CAACCTCAAAGAG	C	4453.07	PASS	AC=6;AF=0.111;AN=54;BaseQRankSum=9.994;DP=555;FS=2.011;HRun=0;HaplotypeScore=195.7237;InbreedingCoeff=0.9960;MQ=79.49;MQ0=0;MQRankSum=-10.156;QD=78.12;ReadPosRankSum=2.509;VQSLOD=4.9968;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	0/0:8,0:8:24.08:0,24,1438	0/0:12,0:12:30.07:0,30,1210	0/0:24,0:23:43.98:0,44,2191	0/0:23,0:23:63.22:0,63,3748	0/0:25,0:25:72.25:0,72,4166	0/0:17,0:17:51.18:0,51,2876	0/0:26,0:25:75.26:0,75,4581	0/0:21,0:21:63.22:0,63,3767	0/0:25,0:25:72.25:0,72,4128	0/0:19,0:19:51.17:0,51,2862	0/0:22,0:22:66.21:0,66,3721	0/0:13,0:13:39.13:0,39,2404	0/0:24,0:24:72.25:0,72,4093	1/1:3,21:24:57.19:2064,57,0	0/0:20,0:20:54.19:0,54,3029	0/0:26,0:26:78.27:0,78,4564	1/1:4,8:12:21.03:697,21,0	0/0:20,0:20:60.19:0,60,3392	0/0:25,0:25:75.24:0,75,4258	0/0:29,0:29:81.26:0,81,4310	0/0:25,0:25:69.24:0,69,4026	0/0:19,0:19:54.19:0,54,3283	0/0:19,0:19:57.20:0,57,3303	1/1:3,18:21:45.15:1692,45,0	0/0:30,0:30:87.29:0,87,5040	0/0:15,0:15:33.11:0,33,1849	0/0:9,0:9:21.07:0,21,1293
chr10	3013077	.	C	CA	856.26	PASS	AB=0.931;AC=20;AF=0.357;AN=56;BaseQRankSum=0.463;DP=663;FS=2.265;HRun=14;HaplotypeScore=100.1081;InbreedingCoeff=0.0820;MQ=69.70;MQ0=2;MQRankSum=-0.657;QD=2.35;ReadPosRankSum=-1.105;VQSLOD=0.2462;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:30:26.32:0,26,76	0/1:7,2:11:10.57:11,0,53	0/0:10,0:7:3.04:0,3,34	0/1:12,0:12:3.51:4,0,12	0/1:20,1:25:17.99:18,0,90	0/1:22,4:27:18:18,0,147	0/0:28,1:33:47.10:0,47,356	0/0:33,1:38:24.88:0,25,263	0/0:18,0:19:22.37:0,22,139	0/1:21,3:24:9.96:10,0,66	0/0:19,1:20:2.75:0,3,139	0/0:25,0:28:10.70:0,11,155	0/0:23,1:25:11.29:0,11,175	0/1:24,0:26:2.33:2,0,85	1/1:10,20:31:23.79:191,24,0	0/1:27,2:31:48.51:49,0,189	0/0:7,0:23:30.26:0,30,88	1/1:7,15:22:19.81:163,20,0	0/0:21,3:25:36.81:0,37,226	0/1:21,5:27:15.29:15,0,128	0/0:23,0:27:5.10:0,5,152	0/1:21,0:21:5.48:5,0,78	0/1:14,2:16:12.33:12,0,56	0/0:20,0:21:1.53:0,2,116	1/1:7,19:26:14.69:132,15,0	1/1:29,0:29:18.95:185,19,0	0/1:23,2:25:17.19:143,0,17	0/1:9,0:10:2.83:68,0,3
chr10	3013090	.	A	AG	1055.12	PASS	AB=0.537;AC=5;AF=0.089;AN=56;BaseQRankSum=-3.540;DP=637;FS=1.200;HRun=0;HaplotypeScore=79.2279;InbreedingCoeff=0.6859;MQ=72.64;MQ0=2;MQRankSum=0.349;QD=16.23;ReadPosRankSum=4.203;VQSLOD=5.8842;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:74.11:0,74,519	0/0:11,0:11:30.76:0,31,283	0/0:16,0:13:26.80:0,27,255	0/0:11,0:10:5.36:0,5,114	0/0:26,0:26:56.36:0,56,521	0/0:22,0:22:48.91:0,49,533	0/0:33,0:33:93.39:0,93,1035	0/0:39,0:39:99:0,105,1086	0/0:19,0:19:54.02:0,54,567	0/0:23,0:23:61.17:0,61,585	0/0:19,0:19:54.49:0,54,586	0/0:26,0:26:65.77:0,66,681	0/0:25,0:25:70.13:0,70,722	0/0:25,0:25:58.57:0,59,561	0/0:29,0:29:27.82:0,28,196	0/0:27,0:27:67.98:0,68,733	0/0:22,0:22:62.13:0,62,420	0/0:20,0:20:2.03:0,2,75	0/0:22,0:22:61.54:0,62,676	0/0:26,0:26:63.67:0,64,629	0/0:24,0:24:47.02:0,47,517	0/0:16,0:16:46.56:0,47,465	0/0:16,0:16:33.98:0,34,336	0/0:21,0:21:49.55:0,50,501	0/0:23,0:23:16.44:0,16,118	0/1:4,25:29:13.53:588,0,14	1/1:7,16:25:35.86:351,36,0	1/1:2,9:11:22.21:245,22,0
chr10	3014874	.	C	CACACAT	1123.16	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.491;DP=947;FS=0.851;HRun=0;HaplotypeScore=211.8807;InbreedingCoeff=0.9699;MQ=55.29;MQ0=14;MQRankSum=-3.553;QD=24.42;ReadPosRankSum=-3.967;VQSLOD=2.4846;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:30,16:46:33.01:1218,33,0	0/0:18,0:18:48.16:0,48,1030	0/0:73,0:34:64.71:0,65,1363	0/0:64,0:36:57.65:0,58,869	0/0:39,0:38:87.23:0,87,1693	0/0:27,0:27:57.20:0,57,1207	0/0:30,0:30:78.22:0,78,1607	0/0:41,0:41:66.55:0,67,1395	0/0:35,0:35:84.27:0,84,1681	0/0:37,0:37:97.70:0,98,2067	0/0:24,0:24:54.17:0,54,1107	0/0:20,0:20:51.17:0,51,1100	0/0:29,0:29:87.23:0,87,1667	0/0:28,0:28:66.20:0,66,1298	0/0:28,0:28:69.23:0,69,1354	0/0:35,0:35:90.29:0,90,1889	0/0:40,0:40:60.31:0,60,1228	0/0:25,0:25:36:0,36,1088	0/0:24,0:22:56.76:0,57,1046	0/0:33,0:32:78.24:0,78,1598	0/0:58,0:58:99:0,132,2712	0/0:32,0:31:87.27:0,87,1807	0/0:24,0:24:66:0,66,1298	0/0:33,0:33:75.26:0,75,1559	0/0:30,0:30:68.26:0,68,1453	0/0:31,0:31:75.26:0,75,1601	0/0:35,0:35:93.25:0,93,1908	0/0:8,0:8:12.04:0,12,255
chr10	3014949	.	AGAGAGATT	A	736.70	PASS	AB=0.919;AC=6;AF=0.107;AN=56;BaseQRankSum=9.912;DP=848;FS=1.903;HRun=0;HaplotypeScore=257.0150;InbreedingCoeff=-0.1246;MQ=70.18;MQ0=3;MQRankSum=-8.059;QD=5.54;ReadPosRankSum=-6.831;VQSLOD=0.7675;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:90.26:0,90,2997	0/0:13,0:13:36.12:0,36,1388	0/0:62,0:35:63.96:0,64,1492	0/0:92,0:54:32.27:0,32,1543	0/0:28,0:28:66.22:0,66,2342	0/0:35,0:35:96.33:0,96,3917	0/0:22,0:22:57.19:0,57,2074	0/0:41,0:40:99:0,102,3672	0/0:34,0:34:99:0,99,4021	0/0:28,0:28:78.27:0,78,3032	0/0:26,0:26:72.25:0,72,2875	0/0:26,0:26:75.26:0,75,2864	0/0:33,0:33:93.06:0,93,3421	0/0:37,0:37:99:0,108,4019	0/1:36,0:37:44.07:44,0,1361	0/0:33,0:33:87.27:0,87,3204	0/1:16,0:16:86.91:87,0,554	0/0:13,0:13:6.06:0,6,577	0/0:11,0:10:24.07:0,24,659	0/0:25,0:25:75.24:0,75,2643	0/0:52,0:52:99:0,141,5058	0/0:19,0:19:54.19:0,54,2066	0/0:27,0:27:69.17:0,69,2636	0/0:23,0:23:60.18:0,60,2191	0/1:27,0:29:99:128,0,697	0/1:21,2:23:99:218,0,1100	0/1:23,2:25:99:315,0,763	0/1:1,1:2:68.92:69,0,94
chr10	3014957	.	T	TGAGA	6713.93	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=9.251;DP=801;FS=0.375;HRun=0;HaplotypeScore=175.2031;InbreedingCoeff=0.9682;MQ=70.11;MQ0=1;MQRankSum=-10.912;QD=49.01;ReadPosRankSum=-1.545;VQSLOD=5.1292;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:81.06:0,81,1199	0/0:12,0:12:33.11:0,33,570	0/0:53,0:37:74.54:0,75,1201	0/0:86,0:52:43.28:0,43,1200	0/0:22,0:22:57.18:0,57,980	0/0:35,0:35:93.29:0,93,1620	0/0:22,0:22:60.10:0,60,1022	0/0:34,0:33:90.31:0,90,1590	0/0:36,0:36:99:0,108,1872	0/0:28,0:28:75.26:0,75,1331	0/0:25,0:25:72.24:0,72,1242	0/0:24,0:24:69.24:0,69,1229	0/0:33,0:33:93.30:0,93,1613	0/0:39,0:39:99:0,105,1834	1/1:17,17:33:77.22:1298,77,0	0/0:30,0:30:81.28:0,81,1430	1/1:9,9:18:36.08:699,36,0	1/1:4,7:11:8.50:459,8,0	0/0:9,0:9:24.05:0,24,394	0/0:24,0:24:66.23:0,66,1158	0/0:48,0:48:99:0,126,2226	0/0:20,0:20:57.20:0,57,1011	0/0:24,0:24:61.45:0,61,1056	0/0:22,0:22:48.12:0,48,789	1/1:12,13:25:59.01:980,59,0	1/1:5,17:22:60.21:1501,60,0	1/1:7,18:25:69.22:1626,69,0	1/1:1,1:2:6.02:152,6,0
chr10	3014960	.	G	GACAC	3463.41	PASS	AB=1.000;AC=10;AF=0.179;AN=56;BaseQRankSum=14.680;DP=794;FS=0.000;HRun=0;HaplotypeScore=187.7219;InbreedingCoeff=0.4419;MQ=70.47;MQ0=1;MQRankSum=-12.288;QD=24.92;ReadPosRankSum=0.878;VQSLOD=3.1108;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:90.29:0,90,1696	0/0:12,0:12:36.11:0,36,684	0/0:52,0:37:87.12:0,87,1509	0/0:79,0:51:73.92:0,74,1578	0/0:21,0:21:63.20:0,63,1209	0/0:34,0:34:99:0,102,1977	0/0:21,0:21:63.13:0,63,1180	0/0:37,0:36:99:0,105,1962	0/0:36,0:36:99:0,108,2153	0/0:29,0:29:84.27:0,84,1608	0/0:25,0:25:72.25:0,72,1437	0/0:24,0:24:69.24:0,69,1378	0/0:33,0:33:96.32:0,96,1880	0/0:38,0:38:99:0,114,2231	1/1:25,6:30:0.55:819,1,0	0/0:29,0:29:87.28:0,87,1690	0/1:19,0:19:38.99:255,0,39	0/1:11,0:11:11.99:236,0,12	0/0:8,0:8:24.08:0,24,447	0/0:25,0:25:69.22:0,69,1341	0/0:48,0:48:99:0,138,2632	0/0:21,0:21:63.19:0,63,1188	0/0:23,0:23:64.46:0,64,1248	0/0:21,0:21:60.19:0,60,1116	1/1:17,6:23:38.06:794,38,0	0/1:26,0:26:89.79:562,0,90	1/1:25,0:25:17.38:742,17,0	0/1:4,0:4:35.95:55,0,36
chr10	3014965	.	ATT	A	1291	PASS	AB=0.978;AC=5;AF=0.089;AN=56;BaseQRankSum=10.525;DP=775;FS=0.500;HRun=2;HaplotypeScore=161.4566;InbreedingCoeff=0.2602;MQ=71.48;MQ0=1;MQRankSum=-9.287;QD=13.59;ReadPosRankSum=-2.929;VQSLOD=-0.3222;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:88.69:0,89,1403	0/0:13,0:13:39.12:0,39,718	0/0:51,0:37:81.89:0,82,1622	0/0:73,0:52:82.87:0,83,1705	0/0:19,0:19:57.18:0,57,1113	0/0:33,0:33:99:0,99,1973	0/0:20,0:20:60.16:0,60,1170	0/0:39,0:39:99:0,117,2316	0/0:37,0:37:99:0,111,2205	0/0:29,0:29:84.29:0,84,1682	0/0:24,0:24:72.24:0,72,1407	0/0:24,0:24:72.25:0,72,1452	0/0:32,0:32:96.31:0,96,1885	0/0:37,0:37:99:0,111,2176	0/1:27,2:28:21.55:688,0,22	0/0:30,0:30:90.31:0,90,1802	0/1:18,0:18:79.88:130,0,80	0/0:11,0:11:23.95:0,24,257	0/0:11,0:11:33.11:0,33,638	0/0:23,0:23:69.24:0,69,1377	0/0:46,0:46:99:0,138,2781	0/0:20,0:20:60.21:0,60,1219	0/0:22,0:22:62.80:0,63,1227	0/0:20,0:20:57.15:0,57,1061	1/1:20,2:22:5.68:560,6,0	0/0:29,0:29:49.35:0,49,818	0/1:26,0:26:26.85:27,0,530	0/0:4,0:4:9.91:0,10,152
chr10	3014974	.	C	CACAG	6114.69	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=5.752;DP=780;FS=0.838;HRun=0;HaplotypeScore=177.4992;InbreedingCoeff=0.9658;MQ=68.88;MQ0=1;MQRankSum=-9.555;QD=31.52;ReadPosRankSum=-0.176;VQSLOD=4.6696;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,25:33:63.22:1560,63,0	0/0:13,0:13:33.10:0,33,528	0/0:41,0:34:46.32:0,46,714	0/0:59,0:49:52.13:0,52,959	0/0:21,0:21:51.16:0,51,825	0/0:34,0:34:69.24:0,69,1158	0/0:19,0:19:36.12:0,36,604	0/0:40,0:40:69.20:0,69,1048	0/0:35,0:35:84.27:0,84,1377	0/0:29,0:29:63.19:0,63,1007	0/0:21,0:21:39.12:0,39,626	0/0:27,0:27:57.18:0,57,931	0/0:28,0:28:69.22:0,69,1129	0/0:36,0:36:72.25:0,72,1202	1/1:28,0:28:36.05:428,36,0	0/0:35,0:35:87.28:0,87,1434	1/1:10,1:19:9.03:135,9,0	1/1:15,0:15:7.18:43,7,0	0/0:14,0:14:30.09:0,30,470	0/0:25,0:25:63.22:0,63,1051	0/0:43,0:43:84.23:0,84,1326	0/0:23,0:23:54.13:0,54,827	0/0:24,0:24:48.15:0,48,774	0/0:18,0:18:42.14:0,42,696	1/1:30,0:31:33.76:389,34,0	1/1:9,25:34:75.25:1780,75,0	1/1:2,25:28:63.22:1557,63,0	1/1:1,4:5:9.03:223,9,0
chr10	3016438	.	AT	A	1839.45	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.191;DP=575;FS=2.593;HRun=1;HaplotypeScore=55.0914;InbreedingCoeff=0.9950;MQ=89.54;MQ0=0;MQRankSum=-5.398;QD=32.85;ReadPosRankSum=0.356;VQSLOD=3.2869;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:66.20:0,66,1029	0/0:12,0:12:36.12:0,36,574	0/0:20,0:20:60.15:0,60,856	0/0:25,0:25:72.13:0,72,978	0/0:37,0:37:99:0,111,1725	0/0:24,0:24:72.23:0,72,1120	0/0:6,0:6:18.06:0,18,287	0/0:30,0:30:90.29:0,90,1396	0/0:21,0:21:63.20:0,63,983	0/0:26,0:26:78.25:0,78,1175	0/0:20,0:20:60.18:0,60,908	0/0:18,0:18:54.11:0,54,761	0/0:18,0:18:54.17:0,54,838	0/0:17,0:17:51.16:0,51,791	0/0:22,0:22:66.23:0,66,1054	0/0:16,0:16:48.15:0,48,744	0/0:31,0:31:93.22:0,93,1395	0/0:12,0:12:36.12:0,36,575	0/0:16,0:16:48.14:0,48,723	0/0:29,0:29:87.28:0,87,1357	0/0:15,0:15:45.14:0,45,696	0/0:30,0:30:87.26:0,87,1320	0/0:25,0:25:72.23:0,72,1105	0/0:9,0:9:27.09:0,27,431	0/0:18,0:18:54.18:0,54,859	1/1:1,25:26:30.30:998,30,0	1/1:0,22:22:51.13:691,51,0	1/1:0,8:8:21.07:293,21,0
chr10	3016626	.	TTTCTGAGGAA	T	943.40	PASS	AC=2;AF=0.037;AN=54;BaseQRankSum=4.750;DP=639;FS=6.539;HRun=0;HaplotypeScore=190.6534;InbreedingCoeff=0.9906;MQ=71.94;MQ0=0;MQRankSum=-4.910;QD=55.49;ReadPosRankSum=1.398;VQSLOD=2.6486;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,117,5993	0/0:13,0:13:39.13:0,39,2134	0/0:17,0:17:48.16:0,48,2143	0/0:13,0:13:17.64:0,18,1334	0/0:30,0:30:90.30:0,90,4383	0/0:27,0:27:81.28:0,81,4246	0/0:28,0:28:84.29:0,84,4466	0/0:26,0:26:78.26:0,78,3603	0/0:27,0:27:81.28:0,81,3979	0/0:30,0:30:87.29:0,87,4646	0/0:16,0:16:48.16:0,48,2213	0/0:26,0:26:78.26:0,78,4060	0/0:24,0:24:72.25:0,72,3740	0/0:22,0:22:66.23:0,66,3339	0/0:30,0:30:87.26:0,87,4206	0/0:23,0:23:69.24:0,69,3517	1/1:0,17:17:30.10:1038,30,0	0/0:13,0:13:36.12:0,36,1661	0/0:23,0:23:64.94:0,65,3030	0/0:20,0:20:60.21:0,60,3058	0/0:35,0:35:99:0,105,5587	0/0:19,0:19:57.20:0,57,2956	0/0:30,0:30:90.31:0,90,4484	0/0:24,0:24:72.25:0,72,3805	0/0:24,0:23:72.25:0,72,3675	0/0:20,0:20:60.21:0,60,2921	0/0:23,0:23:69.22:0,69,3560	./.
chr10	3017131	.	GAAAAA	G	4061.52	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=12.165;DP=593;FS=5.124;HRun=13;HaplotypeScore=127.6795;InbreedingCoeff=0.9805;MQ=67.96;MQ0=3;MQRankSum=-1.482;QD=22.19;ReadPosRankSum=4.383;VQSLOD=1.8333;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,25:35:72.15:1233,72,0	0/0:6,0:6:15.05:0,15,394	0/0:20,0:13:26.91:0,27,427	0/0:14,0:12:9.03:0,9,178	0/0:24,0:27:75.26:0,75,2025	0/0:26,0:27:81.28:0,81,2288	0/0:10,0:10:27.09:0,27,753	0/0:9,0:26:42.46:0,42,247	0/0:18,0:21:57.19:0,57,1494	0/0:30,0:33:93.30:0,93,2489	0/0:21,0:23:66.22:0,66,1768	0/0:11,0:13:36.12:0,36,982	0/0:12,0:13:33.11:0,33,918	0/0:20,0:21:51.18:0,51,1382	1/1:7,1:30:41.88:217,42,0	0/0:22,0:24:60.21:0,60,1650	1/1:3,0:28:35.50:175,36,0	1/1:0,0:13:32.44:121,32,0	0/0:23,0:27:63.22:0,63,1683	0/0:28,0:29:81.28:0,81,2267	0/0:9,0:10:18.06:0,18,506	0/0:23,0:25:72.24:0,72,1922	0/0:26,0:32:75.25:0,75,1920	0/0:8,0:8:15.05:0,15,393	1/1:3,0:17:29.88:111,30,0	1/1:2,18:20:54.14:925,54,0	1/1:4,27:31:60.11:1024,60,0	1/1:3,6:9:15.05:257,15,0
chr10	3017567	.	AT	A	696.76	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=9.013;DP=394;FS=19.815;HRun=3;HaplotypeScore=51.0494;InbreedingCoeff=0.8619;MQ=66.18;MQ0=1;MQRankSum=-8.824;QD=9.29;ReadPosRankSum=0.504;VQSLOD=-0.1311;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,4:8:14.48:104,14,0	0/0:4,0:4:9.03:0,9,128	0/0:11,0:10:29.86:0,30,368	0/0:15,0:13:17.95:0,18,221	0/0:18,0:18:37.93:0,38,527	0/0:14,0:14:26.99:0,27,291	0/0:15,0:15:32.95:0,33,407	0/0:23,0:23:57.13:0,57,703	0/0:20,0:20:36.07:0,36,454	0/0:18,0:18:48.13:0,48,634	0/0:11,0:11:33.06:0,33,408	0/0:22,0:22:29.81:0,30,410	0/0:14,0:14:29.80:0,30,402	0/0:15,0:15:30.06:0,30,374	1/1:14,0:14:26.23:165,26,0	0/0:21,0:21:51.09:0,51,621	1/1:9,0:9:14.44:85,14,0	1/1:4,0:4:5.64:28,6,0	0/0:24,0:24:61.87:0,62,766	0/0:21,0:21:46.13:0,46,682	0/0:16,0:16:42.09:0,42,546	0/0:10,0:10:27.06:0,27,350	0/0:13,0:13:36.09:0,36,458	0/0:14,0:14:27.06:0,27,365	1/1:14,0:14:38.13:242,38,0	0/1:9,0:9:34.21:85,0,34	1/1:10,0:10:13.10:73,13,0	1/1:7,0:7:14.90:109,15,0
chr10	3017569	.	TTA	T	796.90	PASS	AB=1.000;AC=14;AF=0.250;AN=56;BaseQRankSum=7.443;DP=387;FS=29.281;HRun=0;HaplotypeScore=55.7194;InbreedingCoeff=0.7936;MQ=67.61;MQ0=1;MQRankSum=-7.625;QD=11.55;ReadPosRankSum=0.896;VQSLOD=1.4030;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,0:6:12.62:70,13,0	0/0:3,0:3:9.03:0,9,180	0/0:11,0:10:30.07:0,30,473	0/0:16,0:14:20.75:0,21,302	0/0:17,0:17:48.07:0,48,820	0/0:14,0:14:33:0,33,418	0/0:16,0:16:36.04:0,36,584	0/0:22,0:22:66.16:0,66,1059	0/0:19,0:19:42.08:0,42,653	0/0:20,0:20:60.15:0,60,962	0/0:11,0:11:33.08:0,33,534	0/0:22,0:22:45.04:0,45,685	0/0:14,0:14:35.96:0,36,547	0/0:15,0:15:33.07:0,33,528	1/1:0,14:14:29.73:234,30,0	0/0:21,0:21:54.10:0,54,844	1/1:0,9:9:14.92:136,15,0	1/1:0,3:3:6.02:79,6,0	0/0:22,0:22:63.08:0,63,1039	0/0:20,0:20:57:0,57,997	0/0:17,0:17:48.14:0,48,822	0/0:10,0:10:30.07:0,30,504	0/0:14,0:14:42.10:0,42,701	0/0:14,0:14:27.06:0,27,504	1/1:0,14:14:38.66:294,39,0	0/1:9,0:9:75.07:75,0,104	0/1:8,0:8:2.24:2,0,34	1/1:6,0:6:11.37:87,11,0
chr10	3024171	.	TTGTGTGTGTGTGTG	T	2104.93	PASS	AB=0.938;AC=8;AF=0.148;AN=54;BaseQRankSum=5.283;DP=488;FS=22.961;HRun=0;HaplotypeScore=176.3810;InbreedingCoeff=0.5966;MQ=56.26;MQ0=9;MQRankSum=-6.910;QD=22.88;ReadPosRankSum=1.160;VQSLOD=1.4519;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:21:1.64:54,2,0	0/0:12,0:12:21.07:0,21,1226	0/1:22,0:9:8.64:9,0,143	0/0:19,0:11:6.02:0,6,114	0/0:14,0:15:33.11:0,33,1922	0/0:10,0:19:30.10:0,30,1645	0/0:14,0:24:38.79:0,39,1820	0/0:25,0:27:27.08:0,27,607	0/0:11,0:11:12.04:0,12,719	0/0:19,0:19:36.12:0,36,1901	0/0:17,0:18:36.12:0,36,1862	0/0:11,0:11:18.06:0,18,921	0/0:13,0:14:33.58:0,34,2020	0/0:15,0:15:23.73:0,24,1265	1/1:9,16:24:32.62:1302,33,0	0/0:9,0:9:12.04:0,12,793	0/0:15,0:32:33.11:0,33,1889	0/1:6,1:7:56.30:112,0,56	0/0:11,0:11:12.04:0,12,727	0/0:14,0:18:39.13:0,39,1954	0/0:28,0:28:36.59:0,37,1728	0/0:9,0:10:24.08:0,24,1084	0/0:7,0:10:24.08:0,24,1034	0/0:25,0:29:60.21:0,60,2980	1/1:9,7:17:21.04:768,21,0	0/0:14,0:18:29.30:0,29,560	0/0:9,0:14:24.08:0,24,402	./.
chr10	3024214	.	CGTGA	C	1403.01	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=4.982;DP=531;FS=6.061;HRun=0;HaplotypeScore=115.6565;InbreedingCoeff=0.9708;MQ=57.97;MQ0=23;MQRankSum=-4.461;QD=41.27;ReadPosRankSum=2.336;VQSLOD=4.1551;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:42.10:0,42,977	0/0:10,0:10:30.10:0,30,777	0/0:30,0:15:45.06:0,45,932	0/0:34,0:18:41.44:0,41,921	0/0:18,0:18:45.15:0,45,1156	0/0:15,0:15:36.12:0,36,900	0/0:22,0:22:48.16:0,48,1166	0/0:24,0:24:60.21:0,60,1499	0/0:14,0:14:39.13:0,39,944	0/0:20,0:18:42.14:0,42,1038	0/0:12,0:12:21.07:0,21,510	0/0:7,0:7:18.53:0,19,456	0/0:21,0:20:57.18:0,57,1422	0/0:14,0:14:36.12:0,36,837	0/0:30,0:30:57.19:0,57,1145	0/0:10,0:10:30.10:0,30,769	0/0:34,0:33:72.19:0,72,1674	0/0:11,0:11:29.59:0,30,698	0/0:19,0:18:54.17:0,54,1321	0/0:17,0:17:48.16:0,48,1164	0/0:35,0:35:75.13:0,75,1912	0/0:10,0:9:18.06:0,18,464	0/0:9,0:9:27.09:0,27,682	0/0:27,0:27:63.22:0,63,1625	0/0:24,0:24:62.96:0,63,1059	1/1:3,16:19:48.16:840,48,0	1/1:1,11:11:30.10:539,30,0	1/1:0,3:3:9.03:162,9,0
chr10	3025297	.	CG	C	2412.13	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=10.051;DP=757;FS=0.000;HRun=4;HaplotypeScore=69.8646;InbreedingCoeff=0.9637;MQ=84.04;MQ0=0;MQRankSum=-2.115;QD=29.78;ReadPosRankSum=1.467;VQSLOD=3.6331;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,108,1508	0/0:17,0:17:51.16:0,51,694	0/0:24,0:24:63.21:0,63,860	0/0:21,0:21:54.55:0,55,711	0/0:30,0:30:81.25:0,81,1114	0/0:19,0:19:57.17:0,57,765	0/0:24,0:24:72.22:0,72,990	0/0:37,0:37:99:0,99,1369	0/0:28,0:28:78.26:0,78,1091	0/0:35,0:35:99:0,99,1369	0/0:24,0:24:69.23:0,69,963	0/0:28,0:28:78.24:0,78,1058	0/0:23,0:23:69.23:0,69,960	0/0:35,0:35:99:0,102,1411	1/1:2,35:37:99:1188,99,0	0/0:35,0:35:99:0,102,1411	0/0:23,0:23:69.21:0,69,948	1/1:1,20:21:54.17:647,54,0	0/0:31,0:31:90.29:0,90,1245	0/0:31,0:31:93.29:0,93,1268	0/0:40,0:40:99:0,114,1577	0/0:22,0:22:60.20:0,60,840	0/0:33,0:33:99:0,99,1383	0/0:29,0:29:84.28:0,84,1174	1/1:1,22:23:60.17:720,60,0	0/0:24,0:24:69.23:0,69,965	0/0:23,0:23:66.20:0,66,888	0/0:2,0:2:6.02:0,6,84
chr10	3026233	.	CA	C	1930.72	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.951;DP=687;FS=1.139;HRun=1;HaplotypeScore=61.1715;InbreedingCoeff=0.9998;MQ=67.01;MQ0=4;MQRankSum=1.208;QD=35.75;ReadPosRankSum=1.705;VQSLOD=3.7934;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,27:27:69.23:965,69,0	0/0:12,0:12:36.12:0,36,573	0/0:21,0:15:45.11:0,45,651	0/0:29,0:18:37.49:0,37,566	0/0:31,0:31:90.29:0,90,1415	0/0:33,0:33:96.31:0,96,1510	0/0:19,0:18:54.17:0,54,837	0/0:43,0:42:99:0,126,1906	0/0:23,0:23:69.23:0,69,1084	0/0:28,0:28:84.28:0,84,1322	0/0:25,0:25:75.23:0,75,1174	0/0:23,0:23:69.20:0,69,1048	0/0:17,0:17:51.17:0,51,805	0/0:24,0:24:72.23:0,72,1117	0/0:32,0:32:96.33:0,96,1526	0/0:18,0:18:54.18:0,54,863	1/1:0,27:27:78.26:1088,78,0	0/0:16,0:16:48.16:0,48,767	0/0:19,0:19:54.17:0,54,841	0/0:25,0:25:75.19:0,75,1104	0/0:29,0:28:84.27:0,84,1312	0/0:31,0:31:93.22:0,93,1377	0/0:20,0:20:60.20:0,60,956	0/0:12,0:12:36.12:0,36,575	0/0:31,0:31:93.30:0,93,1463	0/0:27,0:27:81.28:0,81,1293	0/0:31,0:31:93.32:0,93,1477	0/0:14,0:14:42.14:0,42,665
chr10	3026466	.	ACAGG	A	1487.26	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.112;DP=853;FS=4.478;HRun=0;HaplotypeScore=132.6396;InbreedingCoeff=0.9883;MQ=62.58;MQ0=0;MQRankSum=2.872;QD=22.20;ReadPosRankSum=2.350;VQSLOD=3.1680;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:56:93.11:0,93,1952	0/0:13,0:13:33.11:0,33,776	0/0:36,0:27:40.75:0,41,790	0/0:41,0:35:65.46:0,65,1097	0/0:22,0:22:33.06:0,33,668	0/0:24,0:24:48.16:0,48,1141	0/0:41,0:41:75.23:0,75,1663	0/0:34,0:34:63.19:0,63,1395	0/0:38,0:38:87.28:0,87,2061	0/0:30,0:30:51.16:0,51,1083	0/0:26,0:26:45.14:0,45,1029	0/0:35,0:35:93.31:0,93,2163	0/0:26,0:26:54.14:0,54,1231	0/0:27,0:27:78.26:0,78,1899	0/0:42,0:42:99:0,99,2200	0/0:40,0:40:96.28:0,96,2175	0/0:30,0:30:72.23:0,72,1689	0/0:16,0:16:28.34:0,28,645	0/0:11,0:11:21.07:0,21,478	0/0:25,0:25:30.10:0,30,699	0/0:51,0:51:93.21:0,93,2077	0/0:31,0:31:42.13:0,42,938	0/0:23,0:23:17.72:0,18,373	0/0:43,0:43:99:0,114,2631	0/0:23,0:23:39.12:0,39,911	1/1:16,8:24:24.02:327,24,0	1/1:6,29:35:63.21:1047,63,0	1/1:2,6:8:15.05:254,15,0
chr10	3029257	.	TAA	T	2518.23	PASS	AB=0.786;AC=14;AF=0.250;AN=56;BaseQRankSum=7.615;DP=565;FS=3.733;HRun=13;HaplotypeScore=75.5351;InbreedingCoeff=0.8318;MQ=73.39;MQ0=0;MQRankSum=0.187;QD=15.74;ReadPosRankSum=5.088;VQSLOD=2.8696;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:0,0:26:54.90:0,55,188	0/0:8,0:8:15.05:0,15,217	0/0:12,0:12:21.06:0,21,258	0/1:16,0:15:3.10:3,0,90	0/0:25,0:27:63.58:0,64,864	0/0:20,0:20:54.17:0,54,762	0/0:14,0:14:42.08:0,42,566	0/0:33,0:36:79.68:0,80,992	0/0:15,0:17:41.58:0,42,504	0/0:23,0:25:59.16:0,59,782	0/0:22,0:23:50.65:0,51,685	0/0:17,0:18:42.14:0,42,606	0/0:23,1:24:43.10:0,43,896	0/0:27,0:29:69.14:0,69,896	1/1:7,23:30:63.05:610,63,0	0/0:24,0:25:69.22:0,69,966	0/1:3,1:12:28.53:29,0,99	1/1:4,24:29:65.91:690,66,0	0/0:14,0:15:32.59:0,33,420	0/0:26,0:26:66.21:0,66,935	0/0:16,0:16:39.11:0,39,528	0/0:13,0:16:32.07:0,32,383	0/0:9,0:9:27.03:0,27,349	0/0:17,0:18:47.65:0,48,661	1/1:4,11:15:27.01:262,27,0	1/1:1,21:23:19.98:522,20,0	1/1:6,19:25:44.34:419,44,0	1/1:1,8:9:18.01:175,18,0
chr10	3030393	.	T	TCC	1028.86	PASS	AB=0.958;AC=14;AF=0.250;AN=56;BaseQRankSum=14.028;DP=672;FS=3.245;HRun=3;HaplotypeScore=111.5432;InbreedingCoeff=0.7657;MQ=81.15;MQ0=0;MQRankSum=-5.675;QD=7.19;ReadPosRankSum=-1.012;VQSLOD=0.0066;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:35,0:35:5.66:157,0,6	0/0:11,0:11:33.11:0,33,462	0/0:26,0:26:68.78:0,69,831	0/0:26,0:26:63.41:0,63,854	0/0:35,0:35:90.28:0,90,1235	0/0:22,0:22:63.16:0,63,813	0/0:29,0:29:84.27:0,84,1158	0/0:27,0:27:69.22:0,69,951	0/0:28,0:28:84.25:0,84,1141	0/0:22,0:22:63.21:0,63,880	0/0:33,0:33:96.29:0,96,1322	0/0:32,0:32:93.31:0,93,1301	0/0:29,0:29:84.28:0,84,1172	0/0:29,0:29:84.26:0,84,1156	1/1:22,0:22:7.70:85,8,0	0/0:24,0:24:69.21:0,69,932	1/1:3,12:17:25.46:421,25,0	1/1:18,0:18:10.08:55,10,0	0/0:22,0:21:57.19:0,57,796	0/0:25,0:25:72.21:0,72,984	0/0:18,0:18:54.15:0,54,721	0/0:30,0:30:90.29:0,90,1235	0/0:27,0:27:78.23:0,78,1044	0/0:34,0:34:99:0,99,1374	1/1:12,0:12:9.93:38,10,0	0/1:10,0:11:30.43:101,0,30	1/1:15,1:19:11.25:299,11,0	1/1:9,0:9:5.34:50,5,0
chr10	3030396	.	CT	C	2003.91	PASS	AB=0.917;AC=15;AF=0.268;AN=56;BaseQRankSum=14.196;DP=665;FS=2.296;HRun=1;HaplotypeScore=90.8684;InbreedingCoeff=0.8832;MQ=78.64;MQ0=0;MQRankSum=-3.557;QD=13.92;ReadPosRankSum=-2.306;VQSLOD=2.2304;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:17,17:34:36.58:388,37,0	0/0:11,0:11:33.11:0,33,483	0/0:24,0:24:71.94:0,72,870	0/0:25,0:25:69.27:0,69,829	0/0:31,0:31:93.29:0,93,1310	0/0:22,0:22:63.13:0,63,844	0/0:30,0:30:90.27:0,90,1276	0/0:26,0:26:75.22:0,75,1032	0/0:28,0:28:84.24:0,84,1172	0/0:21,0:21:63.21:0,63,905	0/0:34,0:34:99:0,102,1397	0/0:32,0:32:96.30:0,96,1365	0/0:30,0:30:90.29:0,90,1291	0/0:29,0:29:87.26:0,87,1232	1/1:16,6:22:59.53:521,60,0	0/0:24,0:24:72.19:0,72,978	1/1:16,0:16:26.36:142,26,0	1/1:15,3:18:53.80:473,54,0	0/0:20,0:19:60.18:0,60,830	0/0:25,0:25:75.22:0,75,1054	0/0:19,0:19:57.17:0,57,794	0/0:30,0:30:90.23:0,90,1202	0/0:26,0:26:78.22:0,78,1078	0/0:34,0:34:99:0,102,1383	1/1:11,2:13:32.87:280,33,0	0/1:10,1:11:22.52:132,0,23	1/1:21,0:21:21.92:199,22,0	1/1:9,0:9:4.46:64,4,0
chr10	3030401	.	C	CACA	3736.31	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=10.498;DP=663;FS=0.000;HRun=0;HaplotypeScore=116.4456;InbreedingCoeff=0.9799;MQ=75.20;MQ0=0;MQRankSum=-4.378;QD=39.33;ReadPosRankSum=-0.652;VQSLOD=3.8557;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:20,1:37:52.31:774,52,0	0/0:11,0:11:33.11:0,33,562	0/0:21,0:21:63.18:0,63,934	0/0:25,0:25:64.31:0,64,933	0/0:31,0:32:96.30:0,96,1697	0/0:25,0:25:70.07:0,70,1110	0/0:29,0:29:87.30:0,87,1587	0/0:23,0:23:69.23:0,69,1135	0/0:28,0:28:81.26:0,81,1400	0/0:22,0:22:66.23:0,66,1198	0/0:32,0:33:99:0,99,1708	0/0:31,0:31:93.32:0,93,1676	0/0:30,0:30:90.31:0,90,1624	0/0:30,0:30:87.29:0,87,1500	1/1:6,16:24:62.67:1223,63,0	0/0:22,0:22:66.21:0,66,1142	0/0:16,0:16:27.83:0,28,162	1/1:5,13:18:52.19:1069,52,0	0/0:19,0:19:60.19:0,60,1007	0/0:25,0:25:75.24:0,75,1277	0/0:20,0:20:57.17:0,57,1029	0/0:24,0:24:72.25:0,72,1323	0/0:25,0:25:69.22:0,69,1219	0/0:33,0:34:96.31:0,96,1663	1/1:3,10:16:29.96:670,30,0	0/0:15,0:15:24.59:0,25,264	0/0:20,0:20:35.12:0,35,288	0/0:7,0:7:8.14:0,8,82
chr10	3031506	.	C	CT	1097.07	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-0.706;DP=627;FS=2.806;HRun=9;HaplotypeScore=96.4804;InbreedingCoeff=0.9709;MQ=71.00;MQ0=1;MQRankSum=0.691;QD=22.86;ReadPosRankSum=0.622;VQSLOD=3.9907;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,15:19:15.95:386,16,0	0/0:4,0:4:11.98:0,12,100	0/0:23,0:20:21.60:0,22,285	0/0:22,0:20:30.89:0,31,368	0/0:24,0:24:56.96:0,57,490	0/0:17,0:17:38.98:0,39,338	0/0:15,0:15:38.98:0,39,338	0/0:36,1:38:52.78:0,53,668	0/0:21,0:21:62.99:0,63,547	0/0:26,0:26:70.54:0,71,603	0/0:24,0:24:62.97:0,63,546	0/0:21,0:22:56.02:0,56,474	0/0:31,0:31:62.91:0,63,539	0/0:18,0:18:47.99:0,48,416	0/0:21,1:22:32.81:0,33,513	0/0:21,0:22:49.99:0,50,419	1/1:0,29:29:75.20:829,75,0	0/0:27,0:27:65.93:0,66,565	0/0:25,0:25:62.97:0,63,544	0/0:24,0:25:58.97:0,59,494	0/0:12,0:12:35.99:0,36,313	0/0:19,0:19:47.98:0,48,416	0/0:21,0:22:56.02:0,56,473	0/0:16,0:16:44.99:0,45,390	0/0:21,1:22:17.78:0,18,383	0/0:30,0:30:86.98:0,87,755	0/0:34,0:35:86.01:0,86,735	0/0:16,0:16:41.98:0,42,364
chr10	3031693	.	T	TAC	63.34	PASS	AB=0.985;AC=6;AF=0.107;AN=56;BaseQRankSum=3.916;DP=438;FS=32.044;HRun=0;HaplotypeScore=64.1692;InbreedingCoeff=0.0413;MQ=32.54;MQ0=7;MQRankSum=-4.056;QD=0.71;ReadPosRankSum=0.685;VQSLOD=0.0586;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:12.04:0,12,180	0/0:4,0:4:2.10:0,2,56	0/0:13,0:3:9.03:0,9,122	0/0:9,0:2:6.01:0,6,71	0/0:27,0:27:6.02:0,6,92	1/1:10,1:11:0.26:1,0,0	0/0:21,0:21:6.53:0,7,97	0/1:15,1:15:29.83:30,0,420	0/0:21,0:21:0:0,0,0	0/0:13,0:12:17.72:0,18,321	0/0:16,0:16:5.38:0,5,53	0/0:18,0:18:0:0,0,0	0/1:21,0:20:35.64:36,0,110	0/0:17,0:16:6.02:0,6,80	0/0:20,1:20:9.02:0,9,117	0/0:19,0:18:0.47:0,0,1	0/0:13,0:13:4.76:0,5,48	0/0:11,0:11:15.87:0,16,158	0/1:21,0:16:23.75:24,0,278	0/0:11,0:11:5.98:0,6,59	0/0:24,0:22:22.54:0,23,236	0/0:16,0:16:6.02:0,6,83	0/0:11,0:11:3:0,3,25	0/0:14,0:14:3:0,3,26	0/0:6,0:6:8.99:0,9,93	0/0:27,1:28:42.39:0,42,733	0/1:20,0:20:77.22:77,0,146	0/0:7,0:7:14.99:0,15,154
chr10	3032905	.	GA	G	1558.48	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=9.463;DP=626;FS=1.034;HRun=8;HaplotypeScore=61.6634;InbreedingCoeff=0.8826;MQ=76.99;MQ0=0;MQRankSum=0.669;QD=19.24;ReadPosRankSum=1.351;VQSLOD=3.4827;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:63.16:0,63,736	0/0:11,0:11:33.10:0,33,398	0/0:18,0:18:36.09:0,36,419	0/1:11,0:11:3.46:3,0,160	0/0:37,0:37:99:0,102,1199	0/0:27,0:27:72.21:0,72,858	0/0:29,1:30:61.79:0,62,1023	0/0:28,0:28:63.18:0,63,742	0/0:22,0:22:60.17:0,60,713	0/0:35,0:35:99:0,102,1221	0/0:23,0:23:66.20:0,66,797	0/0:27,0:27:75.20:0,75,877	0/0:14,0:14:39.09:0,39,457	0/0:20,0:20:60.18:0,60,722	1/1:3,25:28:72.11:695,72,0	0/0:14,0:14:42.12:0,42,497	0/0:20,0:20:60.18:0,60,725	1/1:3,14:17:39.06:377,39,0	0/0:17,0:17:51.16:0,51,616	0/0:25,0:25:66.20:0,66,797	0/0:15,0:15:42.12:0,42,496	0/0:25,0:25:72.22:0,72,869	0/0:25,2:27:43.25:0,43,805	0/0:13,0:13:36.11:0,36,435	1/1:2,23:25:66.06:628,66,0	0/0:29,0:29:72.20:0,72,850	0/0:34,0:34:99:0,102,1222	0/0:12,0:11:30.09:0,30,362
chr10	3034316	.	AAAC	A	543.96	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.036;DP=668;FS=4.933;HRun=0;HaplotypeScore=91.3684;InbreedingCoeff=0.9956;MQ=64.79;MQ0=4;MQRankSum=-0.123;QD=28.63;ReadPosRankSum=3.034;VQSLOD=3.6791;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:54.16:0,54,1016	0/0:8,0:8:21.07:0,21,413	0/0:30,0:22:39.01:0,39,544	0/0:20,0:17:41.96:0,42,711	0/0:27,0:27:57.18:0,57,1107	0/0:32,0:32:75.26:0,75,1478	0/0:21,0:21:51.17:0,51,986	0/0:31,0:31:48.14:0,48,852	0/0:26,0:26:63.22:0,63,1225	0/0:24,0:23:51.17:0,51,963	0/0:17,0:17:51.18:0,51,1026	0/0:22,0:22:63.22:0,63,1255	0/0:27,0:27:60.10:0,60,1140	0/0:20,0:20:45.15:0,45,891	0/0:28,0:28:50.20:0,50,950	0/0:19,0:19:42.14:0,42,804	1/1:2,17:19:45.15:639,45,0	0/0:26,0:26:40.27:0,40,1036	0/0:24,0:23:60.10:0,60,1027	0/0:32,0:32:69.19:0,69,1248	0/0:18,0:18:48.13:0,48,877	0/0:15,0:15:36.11:0,36,687	0/0:36,0:36:89.95:0,90,1654	0/0:28,0:28:63.22:0,63,1270	0/0:20,0:20:45.15:0,45,867	0/0:25,0:25:59.23:0,59,1123	0/0:32,0:32:84.21:0,84,1552	0/0:18,0:18:42.12:0,42,790
chr10	3034569	.	TTC	T	618.69	PASS	AB=0.967;AC=24;AF=0.480;AN=50;BaseQRankSum=3.748;DP=628;FS=10.754;HRun=0;HaplotypeScore=101.6086;InbreedingCoeff=0.2572;MQ=65.53;MQ0=27;MQRankSum=-0.168;QD=1.96;ReadPosRankSum=2.869;VQSLOD=1.2931;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:17:5.85:0,6,42	./.	./.	0/0:49,0:22:2.96:0,3,19	0/0:29,0:27:6:0,6,68	0/0:30,0:28:3:0,3,44	0/0:18,0:18:3.23:0,3,153	./.	1/1:16,0:17:6.42:43,6,0	0/1:24,0:23:9.50:10,0,130	0/0:14,0:14:3.01:0,3,44	0/1:19,2:21:20.11:20,0,65	0/0:18,3:21:14.67:0,15,111	0/1:19,0:18:35.74:36,0,114	1/1:18,0:25:23.90:127,24,0	0/0:18,0:17:11.89:0,12,127	0/0:13,0:13:6.75:0,7,43	1/1:20,0:22:17.57:101,18,0	1/1:27,0:25:17.91:140,18,0	0/1:26,0:25:12.52:13,0,66	0/1:26,0:25:11.96:12,0,124	1/1:18,5:21:3.01:32,3,0	0/0:28,0:28:4.26:0,4,102	0/1:14,2:15:20.27:20,0,81	1/1:26,0:25:17.51:126,18,0	1/1:16,0:20:8.37:62,8,0	1/1:10,0:14:2.84:14,3,0	1/1:4,0:5:5.68:28,6,0
chr10	3034647	.	A	ATG	244.46	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.567;DP=703;FS=0.000;HRun=0;HaplotypeScore=109.3928;InbreedingCoeff=0.9159;MQ=52.05;MQ0=19;MQRankSum=-2.596;QD=16.30;ReadPosRankSum=-0.102;VQSLOD=3.3307;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:19:8.87:0,9,114	0/0:14,0:14:36.12:0,36,458	0/0:42,0:7:15.03:0,15,173	0/0:43,0:9:27.06:0,27,325	0/0:25,0:25:75.24:0,75,947	0/0:19,0:19:41.65:0,42,534	0/0:25,0:25:60.17:0,60,748	0/0:40,0:40:96.04:0,96,1165	0/0:20,0:20:42.78:0,43,546	0/0:34,0:31:66.15:0,66,835	0/0:18,0:18:39.12:0,39,484	0/0:25,0:25:63.17:0,63,759	0/0:19,0:19:42.13:0,42,534	0/0:14,0:13:36.10:0,36,443	0/0:33,0:32:56.97:0,57,862	0/0:29,0:29:72.38:0,72,916	1/1:4,11:14:21.07:337,21,0	0/0:24,0:24:54.17:0,54,686	0/0:22,0:16:30.09:0,30,380	0/0:16,0:16:33.05:0,33,407	0/0:44,0:43:93.28:0,93,1168	0/0:32,0:31:69.22:0,69,878	0/0:19,0:19:48.15:0,48,610	0/0:21,0:21:48.15:0,48,605	0/0:21,0:20:33.56:0,34,406	0/0:37,0:36:46.02:0,46,1047	0/0:17,0:16:35.76:0,36,474	0/0:12,0:12:17.76:0,18,289
chr10	3034663	.	ATG	A	1286.17	PASS	AB=0.866;AC=14;AF=0.250;AN=56;BaseQRankSum=6.882;DP=717;FS=7.718;HRun=0;HaplotypeScore=103.0460;InbreedingCoeff=0.1949;MQ=52.37;MQ0=14;MQRankSum=0.536;QD=5.00;ReadPosRankSum=2.412;VQSLOD=2.0839;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:0:0,0,0	0/1:11,2:13:41.30:41,0,275	0/0:23,0:6:6.02:0,6,88	0/0:37,0:9:3.01:0,3,40	0/0:28,1:28:13.96:0,14,631	0/0:18,0:18:39.12:0,39,577	0/1:21,2:23:28.82:29,0,419	0/0:42,0:43:26.38:0,26,336	0/0:26,0:26:32.19:0,32,499	0/0:31,1:28:13.94:0,14,601	0/1:14,1:16:12.22:12,0,420	0/0:26,1:27:19.92:0,20,665	0/0:24,0:25:14.86:0,15,777	0/1:14,2:15:4.10:4,0,385	1/1:10,22:32:16.54:595,17,0	0/0:32,0:32:51.79:0,52,923	1/1:9,0:17:4.48:18,4,0	1/1:8,18:28:35.66:370,36,0	0/1:19,3:20:83.33:83,0,122	0/1:15,1:16:7.14:7,0,277	0/1:50,2:51:29.18:29,0,992	0/0:36,1:37:31.73:0,32,761	0/0:21,0:22:33.10:0,33,486	0/0:24,0:24:16.94:0,17,651	0/1:6,14:21:15.82:258,0,16	0/0:22,0:31:39.01:0,39,397	0/0:13,0:19:17.79:0,18,167	0/0:5,0:11:14.99:0,15,130
chr10	3035698	.	GA	G	296.02	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.558;DP=573;FS=2.470;HRun=10;HaplotypeScore=55.7206;InbreedingCoeff=0.8069;MQ=76.35;MQ0=0;MQRankSum=-1.970;QD=14.80;ReadPosRankSum=0.855;VQSLOD=3.8420;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,2:22:11.06:0,11,578	0/0:10,0:10:30.08:0,30,332	0/0:18,1:18:3.97:0,4,250	0/0:11,0:11:11.92:0,12,164	0/0:27,0:27:72.19:0,72,796	0/0:27,0:27:53.42:0,53,766	0/0:16,0:16:45.12:0,45,498	0/0:27,1:28:46.10:0,46,724	0/0:13,1:14:16.06:0,16,389	0/0:35,2:37:44.19:0,44,906	0/0:20,0:20:51.13:0,51,564	0/0:23,0:23:60.14:0,60,653	0/0:12,0:12:30.08:0,30,332	0/0:18,0:18:54.15:0,54,597	0/0:24,0:24:34.12:0,34,604	0/0:16,0:16:36.10:0,36,398	1/1:4,16:20:44.99:391,45,0	0/0:13,0:13:33.09:0,33,365	0/0:21,0:21:54.15:0,54,597	0/0:28,0:28:78.21:0,78,863	0/0:9,0:9:27.07:0,27,299	0/0:21,0:21:45.12:0,45,498	0/0:26,2:28:26.14:0,26,744	0/0:10,0:10:30.08:0,30,332	0/0:18,1:20:30.92:0,31,544	0/0:31,0:31:81.20:0,81,881	0/0:31,0:30:90.21:0,90,978	0/0:17,0:17:51.09:0,51,543
chr10	3039480	.	GTTA	G	231.47	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.083;DP=614;FS=0.000;HRun=0;HaplotypeScore=105.3869;InbreedingCoeff=0.7824;MQ=73.94;MQ0=0;MQRankSum=-5.308;QD=9.26;ReadPosRankSum=1.450;VQSLOD=3.1921;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:57.07:0,57,953	0/0:11,0:11:30.09:0,30,604	0/0:25,0:25:54.09:0,54,815	0/0:37,0:37:46.01:0,46,1321	0/0:18,0:18:48.15:0,48,911	0/0:16,0:16:42.10:0,42,751	0/0:17,0:17:42.12:0,42,775	0/0:44,0:44:10.20:0,10,1169	0/0:34,0:34:93.27:0,93,1853	0/0:9,0:9:27.07:0,27,453	0/0:10,0:10:27.08:0,27,526	0/0:30,0:30:87.26:0,87,1693	0/0:26,0:26:75.22:0,75,1435	0/0:24,0:24:69.24:0,69,1382	0/0:35,0:35:99:0,102,1959	0/0:28,0:28:72.22:0,72,1390	1/1:16,9:24:32.23:326,32,0	0/0:13,0:13:19.16:0,19,659	0/0:11,0:11:24:0,24,391	0/0:22,0:22:63.19:0,63,1291	0/0:24,0:24:63.13:0,63,1103	0/0:12,0:12:32.78:0,33,639	0/0:11,0:11:33.11:0,33,676	0/0:29,0:29:81.24:0,81,1578	0/0:15,0:15:1.50:0,1,806	0/0:25,0:25:68.57:0,69,1242	0/0:21,0:21:57.20:0,57,1163	0/0:20,0:20:45.15:0,45,964
chr10	3040051	.	T	TAC	4638.14	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-4.166;DP=1000;FS=15.776;HRun=0;HaplotypeScore=146.0055;InbreedingCoeff=0.9728;MQ=55.91;MQ0=20;MQRankSum=1.664;QD=26.20;ReadPosRankSum=0.345;VQSLOD=5.3106;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:51:94.86:0,95,1280	0/0:9,0:9:27.08:0,27,331	0/0:40,0:17:20.01:0,20,204	0/0:54,0:17:13.83:0,14,180	0/0:34,0:34:83.10:0,83,955	0/0:25,0:25:63.17:0,63,746	0/0:29,0:29:72.18:0,72,858	0/0:46,0:41:56.25:0,56,741	0/0:26,0:26:51.16:0,51,627	0/0:40,0:39:99:0,99,1189	0/0:19,0:20:50.94:0,51,577	0/0:39,0:39:75.22:0,75,911	0/0:52,0:52:99:0,123,1477	0/0:28,0:29:72.05:0,72,850	1/1:11,31:42:69.65:1095,70,0	0/0:37,0:37:90.24:0,90,1076	0/0:41,0:39:46.43:0,46,984	1/1:19,6:24:40.67:558,41,0	0/0:21,0:15:27.08:0,27,332	0/0:35,0:35:84.17:0,84,1014	0/0:79,0:78:99:0,195,2301	0/0:33,0:33:72.20:0,72,858	0/0:29,0:30:78.02:0,78,895	0/0:50,0:50:99:0,113,1358	1/1:18,10:27:65.88:999,66,0	1/1:11,27:39:57.75:1301,58,0	1/1:7,25:32:36.12:587,36,0	1/1:4,6:9:6.02:98,6,0
chr10	3040073	.	TAC	T	979.43	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.637;DP=988;FS=6.724;HRun=0;HaplotypeScore=153.4525;InbreedingCoeff=0.8713;MQ=54.49;MQ0=32;MQRankSum=-1.272;QD=21.29;ReadPosRankSum=-0.032;VQSLOD=3.9568;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:20,26:40:76.18:1074,76,0	0/0:13,0:13:36.11:0,36,563	0/0:23,0:7:9.02:0,9,148	0/0:34,0:6:9.03:0,9,128	0/0:32,0:32:92.40:0,92,1440	0/0:23,0:23:62.60:0,63,1019	0/0:33,0:32:90.26:0,90,1484	0/0:57,0:49:99:0,105,1618	0/0:24,0:24:42.99:0,43,986	0/0:42,0:42:99:0,117,1952	0/0:22,0:22:54.14:0,54,832	0/0:38,0:38:96.33:0,96,1607	0/0:51,0:51:99:0,141,2337	0/0:30,0:30:87.23:0,87,1404	0/0:42,0:41:86.81:0,87,1413	0/0:39,0:39:66.65:0,67,1554	0/0:48,0:45:99:0,114,1911	0/0:31,0:30:78.13:0,78,1224	0/0:27,0:18:44.98:0,45,703	0/0:40,0:40:99:0,105,1652	0/0:84,1:82:99:0,223,3594	0/0:26,0:26:75.25:0,75,1227	0/0:26,0:26:69.12:0,69,1070	0/0:52,0:52:99:0,129,2080	0/0:28,0:27:61.89:0,62,954	0/0:39,0:38:96.33:0,96,1589	0/0:27,0:27:57.17:0,57,903	0/0:9,0:8:12.04:0,12,204
chr10	3040145	.	CACAA	C	1005.25	PASS	AC=2;AF=0.037;AN=54;BaseQRankSum=5.837;DP=913;FS=0.744;HRun=0;HaplotypeScore=174.1188;InbreedingCoeff=0.9365;MQ=52.69;MQ0=28;MQRankSum=-2.157;QD=27.92;ReadPosRankSum=-0.780;VQSLOD=3.0277;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,17:33:14.24:1093,14,0	0/0:9,0:9:24.08:0,24,633	./.	0/0:33,0:7:18.23:0,18,265	0/0:26,0:25:72.13:0,72,1553	0/0:19,0:19:57.14:0,57,1356	0/0:22,0:22:63.19:0,63,1462	0/0:69,0:62:99:0,146,2288	0/0:38,0:38:99:0,111,2743	0/0:35,0:33:87.21:0,87,1871	0/0:23,0:22:63.18:0,63,1448	0/0:36,0:36:98.33:0,98,2258	0/0:44,0:44:99:0,129,2924	0/0:29,0:29:84.29:0,84,2043	0/0:38,0:38:90.26:0,90,2217	0/0:31,0:31:89.89:0,90,2022	0/0:55,0:54:99:0,137,2986	0/0:36,0:36:93.24:0,93,2090	0/0:24,0:17:51.16:0,51,1199	0/0:22,0:22:63.12:0,63,1364	0/0:81,0:80:99:0,217,5212	0/0:23,0:22:60.13:0,60,1272	0/0:16,0:16:48.16:0,48,1233	0/0:42,0:42:99:0,113,2633	0/0:14,0:14:11.33:0,11,522	0/0:31,0:31:84.24:0,84,2072	0/0:38,0:38:87.25:0,87,2121	0/0:15,0:15:27.09:0,27,692
chr10	3040171	.	T	TAC	2223.20	PASS	AB=0.965;AC=8;AF=0.143;AN=56;BaseQRankSum=2.048;DP=862;FS=2.666;HRun=0;HaplotypeScore=132.2135;InbreedingCoeff=0.1562;MQ=53.23;MQ0=30;MQRankSum=-7.275;QD=8.72;ReadPosRankSum=-1.919;VQSLOD=2.9076;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:28:75.05:0,75,890	0/0:9,0:9:21.07:0,21,267	0/0:31,0:6:8.92:0,9,112	0/0:42,0:6:14.79:0,15,130	0/0:30,0:29:75.15:0,75,911	0/0:26,0:26:63.04:0,63,778	0/0:26,0:25:69.17:0,69,834	0/1:47,17:54:99:1166,0,210	0/0:32,0:32:84.23:0,84,1042	0/0:31,0:30:35.06:0,35,755	0/0:17,0:16:42.11:0,42,511	0/0:32,0:31:84.22:0,84,1033	0/0:39,0:39:99:0,99,1235	0/0:31,0:30:75.21:0,75,921	0/1:39,0:38:39.09:39,0,185	0/0:32,0:32:78.21:0,78,936	1/1:29,15:44:37.13:1102,37,0	0/1:28,0:27:8.43:8,0,203	0/0:24,0:15:25.40:0,25,340	0/0:17,0:17:45.14:0,45,566	0/0:68,0:67:99:0,165,2064	0/0:23,0:23:60.19:0,60,762	0/0:14,0:14:33.10:0,33,407	0/0:41,0:41:99:0,99,1182	0/1:16,0:15:6.27:6,0,79	0/1:30,0:30:1.48:1,0,274	0/1:33,0:33:30.77:31,0,166	0/0:12,0:12:15.84:0,16,118
chr10	3040183	.	A	AAC	4027.25	PASS	AB=0.785;AC=12;AF=0.214;AN=56;BaseQRankSum=-3.956;DP=847;FS=5.052;HRun=0;HaplotypeScore=123.7717;InbreedingCoeff=0.4965;MQ=52.63;MQ0=23;MQRankSum=-3.877;QD=15.14;ReadPosRankSum=1.743;VQSLOD=3.0377;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:31:68.95:0,69,748	0/0:7,0:7:21.07:0,21,263	0/0:25,0:5:6.02:0,6,72	0/0:42,0:6:5.37:0,5,35	0/0:30,0:29:66.15:0,66,793	0/0:31,0:32:83.51:0,84,947	0/0:26,0:25:54.09:0,54,639	0/1:71,0:60:72.98:73,0,544	0/0:28,0:28:71.82:0,72,873	0/0:26,0:24:19.63:0,20,662	0/0:19,0:17:51.12:0,51,612	0/0:34,0:33:84.18:0,84,991	0/0:39,0:39:87.22:0,87,1044	0/0:27,0:26:69.21:0,69,851	1/1:7,28:35:22.69:903,23,0	0/0:33,0:32:78.23:0,78,959	0/1:38,0:41:99:115,0,132	0/1:8,20:27:20.36:691,0,20	0/0:28,0:20:21.68:0,22,434	0/0:19,0:19:54.12:0,54,641	0/0:61,0:62:99:0,153,1845	0/0:22,0:21:63.19:0,63,776	0/0:13,0:13:33.10:0,33,411	0/0:35,0:36:75.22:0,75,924	0/1:4,15:19:42.06:412,0,42	1/1:8,22:30:28.69:992,29,0	1/1:5,26:32:48.08:792,48,0	1/1:0,7:7:3.01:50,3,0
chr10	3040213	.	AAC	A	2373.48	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=7.227;DP=770;FS=15.677;HRun=0;HaplotypeScore=111.4937;InbreedingCoeff=0.9064;MQ=56.30;MQ0=12;MQRankSum=-4.610;QD=16.26;ReadPosRankSum=-1.724;VQSLOD=2.1091;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,25:33:48.14:603,48,0	0/0:7,0:7:15.05:0,15,249	0/0:35,0:22:59.73:0,60,708	0/1:19,0:4:0.02:0,0,89	0/0:25,1:26:34.38:0,34,1091	0/0:30,0:30:74.98:0,75,1190	0/0:27,0:26:63.20:0,63,1020	1/1:20,36:50:99:1258,102,0	0/0:24,0:24:54.17:0,54,842	0/0:30,0:28:69.23:0,69,1108	0/0:20,0:18:45.12:0,45,685	0/0:33,0:32:87.28:0,87,1413	0/0:31,0:31:43.42:0,43,1250	0/0:25,0:25:69.24:0,69,1136	0/0:33,0:32:63.19:0,63,981	0/0:33,0:32:84.29:0,84,1372	1/1:15,21:36:54.39:654,54,0	0/0:27,0:26:54.15:0,54,834	0/0:18,0:18:48.16:0,48,788	0/0:21,0:21:45.12:0,45,687	0/0:49,0:48:99:0,111,1754	0/0:23,0:22:25.68:0,26,938	0/0:12,0:12:27.09:0,27,442	0/0:31,0:31:66.23:0,66,1081	0/0:25,0:24:48.14:0,48,739	0/0:30,0:30:78.27:0,78,1263	0/0:23,0:23:45.08:0,45,696	0/0:11,0:11:24.08:0,24,385
chr10	3040324	.	TTA	T	999.17	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=-1.336;DP=448;FS=1.405;HRun=0;HaplotypeScore=74.2787;InbreedingCoeff=0.5904;MQ=73.15;MQ0=1;MQRankSum=-1.126;QD=22.20;ReadPosRankSum=1.364;VQSLOD=4.0755;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:33.02:0,33,406	0/0:5,0:5:15.05:0,15,269	0/0:20,0:15:29.85:0,30,395	0/0:13,0:9:20.80:0,21,207	0/0:25,0:25:75.20:0,75,1323	0/0:15,0:15:42.05:0,42,643	0/0:9,0:9:14.31:0,14,311	0/1:13,0:23:43.08:175,0,43	0/0:9,0:9:27.05:0,27,420	0/0:28,0:28:77.92:0,78,1286	0/0:26,0:26:78.12:0,78,1170	0/0:10,0:10:30.08:0,30,525	0/0:8,0:8:24.05:0,24,374	0/0:5,0:5:15:0,15,191	0/0:17,0:17:38.97:0,39,461	0/0:7,0:7:18.02:0,18,255	1/1:5,17:22:65.85:930,66,0	0/0:22,0:22:63.04:0,63,768	0/0:20,0:20:55.89:0,56,891	0/0:19,0:19:51.04:0,51,707	0/0:7,0:7:21.04:0,21,314	0/0:19,0:19:39.13:0,39,673	0/0:16,0:16:42.11:0,42,749	0/0:7,0:7:21:0,21,309	0/0:25,0:24:58.80:0,59,788	0/0:27,0:27:81.04:0,81,1009	0/0:27,0:26:60.17:0,60,864	0/0:5,0:5:9.03:0,9,135
chr10	3040325	.	T	TA	1819.44	PASS	AB=0.730;AC=15;AF=0.268;AN=56;BaseQRankSum=-1.668;DP=490;FS=12.908;HRun=13;HaplotypeScore=84.4498;InbreedingCoeff=0.5884;MQ=70.91;MQ0=1;MQRankSum=0.215;QD=9.10;ReadPosRankSum=-1.054;VQSLOD=1.1054;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,8:12:20.96:185,21,0	0/0:5,0:5:14.84:0,15,100	0/0:17,0:14:18.28:0,18,91	0/0:13,0:9:5.89:0,6,40	0/0:27,0:27:59.46:0,59,411	0/0:14,0:16:25.77:0,26,170	0/0:6,0:9:2.60:0,3,78	1/1:23,0:23:42.29:340,42,0	0/0:10,0:10:17.78:0,18,120	0/0:29,0:29:56.06:0,56,373	0/0:25,0:26:43.55:0,44,290	0/0:10,0:10:20.72:0,21,142	0/0:10,0:10:3.49:0,3,98	0/0:6,0:7:7.95:0,8,47	1/1:6,12:18:3.90:171,4,0	0/0:9,0:11:10.87:0,11,66	0/0:22,0:22:38.67:0,39,117	1/1:14,8:22:26.98:242,27,0	0/0:20,0:21:31.89:0,32,227	0/1:20,2:23:23.91:24,0,137	0/0:8,0:8:11.85:0,12,80	0/0:15,0:21:40.62:0,41,241	0/0:18,1:19:9.83:0,10,200	0/0:5,0:7:18.92:0,19,112	1/1:8,20:30:2.35:292,2,0	0/1:16,15:31:19.75:255,0,20	0/1:11,23:33:2.82:382,0,3	1/1:1,5:6:11.99:105,12,0
chr10	3040376	.	GTT	G	379.19	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=0.911;DP=492;FS=3.455;HRun=11;HaplotypeScore=90.4843;InbreedingCoeff=0.5187;MQ=55.23;MQ0=12;MQRankSum=-5.036;QD=16.49;ReadPosRankSum=-1.652;VQSLOD=2.5015;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:13:27.97:0,28,261	0/0:2,0:2:6.02:0,6,92	0/0:48,0:8:17.17:0,17,142	0/0:32,0:5:3:0,3,25	0/0:28,0:29:69.11:0,69,928	0/0:13,0:13:27.01:0,27,275	0/0:9,0:11:23.56:0,24,314	1/1:7,16:22:4.48:458,4,0	0/0:9,0:9:26.91:0,27,341	0/0:26,0:26:58.78:0,59,751	0/0:23,0:21:56.55:0,57,691	0/0:11,0:11:23.95:0,24,269	0/0:9,0:9:24.04:0,24,320	0/0:8,0:7:12:0,12,159	0/0:13,0:13:25.27:0,25,241	0/0:11,0:11:30.01:0,30,396	0/0:15,0:15:19.82:0,20,146	0/0:17,0:17:38.84:0,39,394	0/0:22,0:21:45.12:0,45,661	0/0:25,0:25:65.28:0,65,805	0/0:4,0:3:9.03:0,9,138	0/0:17,0:17:38.97:0,39,475	0/0:22,0:22:56.66:0,57,712	0/0:9,0:9:15.02:0,15,205	0/0:23,0:23:47.27:0,47,473	0/0:23,0:23:57.07:0,57,760	0/0:24,0:23:44.41:0,44,550	0/0:6,0:6:6.02:0,6,86
chr10	3040392	.	CT	C	385.11	PASS	AB=0.905;AC=9;AF=0.161;AN=56;BaseQRankSum=5.042;DP=530;FS=4.373;HRun=13;HaplotypeScore=85.2655;InbreedingCoeff=0.3250;MQ=48.41;MQ0=19;MQRankSum=0.276;QD=2.16;ReadPosRankSum=2.300;VQSLOD=-0.3476;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:14:8.63:0,9,59	0/0:2,0:2:3:0,3,29	0/1:67,0:11:9.10:9,0,45	0/0:41,0:5:2.80:0,3,13	0/0:28,0:30:62.84:0,63,511	0/0:12,0:13:3.92:0,4,192	0/0:14,0:14:22.78:0,23,198	0/0:21,0:27:7.12:0,7,124	0/0:8,0:8:8.18:0,8,106	0/0:23,0:24:50.36:0,50,477	0/1:19,1:19:0.82:1,0,240	0/0:13,0:13:9.87:0,10,125	0/0:12,0:12:26.58:0,27,204	0/0:10,0:9:10.36:0,10,83	0/1:9,5:14:1.23:138,0,1	0/0:12,0:12:29.05:0,29,246	0/1:9,0:11:5.42:5,0,17	1/1:14,5:20:21.07:176,21,0	0/0:23,0:21:34.03:0,34,285	0/0:25,0:26:60.22:0,60,543	0/0:5,0:4:9.01:0,9,87	0/0:13,0:14:14.48:0,14,172	0/0:20,0:21:10.74:0,11,181	0/0:9,0:8:8.61:0,9,68	1/1:14,4:20:11.50:183,11,0	0/0:22,1:23:23.61:0,24,362	0/1:23,0:22:4.05:4,0,215	0/0:4,0:4:3:0,3,29
chr10	3041708	.	CAGGAACTGGTCTT	C	516.49	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.751;DP=692;FS=16.479;HRun=0;HaplotypeScore=242.0268;InbreedingCoeff=0.9799;MQ=86.04;MQ0=0;MQRankSum=-3.800;QD=39.73;ReadPosRankSum=-0.413;VQSLOD=1.8223;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:54.19:0,54,3306	0/0:13,0:13:36.12:0,36,2389	0/0:22,0:22:63.22:0,63,3196	0/0:24,0:24:69.24:0,69,3586	0/0:31,0:31:87.28:0,87,5231	0/0:39,0:39:99:0,117,6925	0/0:20,0:20:60.21:0,60,3088	0/0:38,0:38:99:0,108,6775	0/0:21,0:21:63.22:0,63,4101	0/0:30,0:30:87.30:0,87,5538	0/0:18,0:18:51.18:0,51,3079	0/0:25,0:25:72.25:0,72,4311	0/0:27,0:27:75.26:0,75,4741	0/0:28,0:28:81.28:0,81,5213	0/0:23,0:23:66.23:0,66,3891	0/0:18,0:18:54.19:0,54,3369	1/1:6,7:13:15.05:605,15,0	0/0:28,0:28:81.28:0,81,4966	0/0:23,0:23:66.22:0,66,3305	0/0:28,0:28:81.26:0,81,4807	0/0:29,0:29:87.28:0,87,5216	0/0:24,0:24:72.25:0,72,4577	0/0:24,0:24:72.23:0,72,4115	0/0:34,0:34:99:0,99,6282	0/0:21,0:21:63.22:0,63,4095	0/0:29,0:29:87.29:0,87,5242	0/0:36,0:36:99:0,99,6008	0/0:7,0:7:21.07:0,21,1242
chr10	3043748	.	TTAGGCCACAGAG	T	2975.87	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.744;DP=630;FS=9.336;HRun=0;HaplotypeScore=206.6702;InbreedingCoeff=0.9865;MQ=86.01;MQ0=0;MQRankSum=-8.837;QD=69.21;ReadPosRankSum=1.664;VQSLOD=2.1510;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:75.25:0,75,4043	0/0:10,0:10:30.10:0,30,1858	0/0:13,0:13:39.13:0,39,2182	0/0:28,0:28:84.15:0,84,4287	0/0:21,0:21:63.18:0,63,3320	0/0:29,0:29:87.28:0,87,5061	0/0:25,0:25:72.20:0,72,3493	0/0:33,0:33:87.28:0,87,4602	0/0:19,0:19:57.20:0,57,3448	0/0:40,0:40:99:0,114,6012	0/0:19,0:19:57.20:0,57,3415	0/0:21,0:21:60.19:0,60,3560	0/0:17,0:17:48.16:0,48,2747	0/0:20,0:20:54.18:0,54,3003	1/1:0,12:12:24.08:912,24,0	0/0:36,0:36:99:0,108,6134	0/0:25,0:25:75.26:0,75,4510	1/1:0,6:6:12.04:456,12,0	0/0:22,0:22:63.20:0,63,3289	0/0:24,0:24:72.25:0,72,4379	0/0:22,0:22:66.22:0,66,3869	0/0:26,0:26:75.19:0,75,4094	0/0:34,0:34:99:0,99,5714	0/0:17,0:17:51.16:0,51,2870	1/1:1,24:25:47.98:1747,48,0	0/0:31,0:31:93.32:0,93,5284	0/0:23,0:23:69.24:0,69,4021	0/0:7,0:7:21.07:0,21,1255
chr10	3044175	.	CAT	C	688.22	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.424;DP=285;FS=1.680;HRun=0;HaplotypeScore=44.5131;InbreedingCoeff=0.5947;MQ=68.50;MQ0=1;MQRankSum=-2.656;QD=20.24;ReadPosRankSum=-2.709;VQSLOD=2.9433;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:7:4.24:0,4,28	0/0:3,0:3:6.02:0,6,101	0/0:5,0:4:2.99:0,3,24	0/0:5,0:5:7.13:0,7,33	0/0:15,0:15:42.14:0,42,708	0/0:16,0:16:45.14:0,45,732	0/0:9,0:9:24.08:0,24,405	1/1:6,26:32:72.12:757,72,0	0/0:7,0:6:15.05:0,15,252	0/0:7,0:7:21.07:0,21,338	0/0:11,0:11:30.10:0,30,506	0/0:8,0:8:24.08:0,24,405	0/0:6,0:6:9.03:0,9,152	0/0:8,0:8:24.08:0,24,405	0/0:8,0:8:18.06:0,18,300	0/0:12,0:12:36.12:0,36,604	0/0:13,0:13:33.11:0,33,549	0/0:8,0:8:24.08:0,24,404	0/0:18,0:17:42.14:0,42,706	0/0:13,0:13:27.09:0,27,455	0/0:8,0:8:24.08:0,24,405	1/1:1,1:2:3.01:39,3,0	0/0:4,0:4:9.03:0,9,152	0/0:1,0:1:3.01:0,3,51	0/0:12,0:12:30.10:0,30,502	0/0:12,0:12:27.09:0,27,456	0/0:24,0:24:69.22:0,69,1138	0/0:10,0:10:30.10:0,30,491
chr10	3044281	.	TG	T	2181.35	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.547;DP=410;FS=2.399;HRun=2;HaplotypeScore=39.6068;InbreedingCoeff=0.9807;MQ=78.20;MQ0=0;MQRankSum=-0.823;QD=33.56;ReadPosRankSum=-3.005;VQSLOD=2.4301;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,7:7:17.99:212,18,0	0/0:4,0:4:12.03:0,12,160	0/0:9,0:9:24.08:0,24,359	0/0:9,0:10:26.96:0,27,372	0/0:19,0:19:54.18:0,54,800	0/0:12,0:12:36.08:0,36,478	0/0:14,0:14:42.14:0,42,625	1/1:1,42:43:99:1605,126,0	0/0:9,0:9:27.08:0,27,384	0/0:19,0:19:57.17:0,57,802	0/0:21,0:21:63.20:0,63,921	0/0:12,0:12:36.12:0,36,539	0/0:13,0:13:39.11:0,39,562	0/0:14,0:14:39.13:0,39,582	0/0:14,0:14:42.13:0,42,610	0/0:14,0:14:39.13:0,39,584	1/1:0,15:15:39.13:506,39,0	0/0:24,0:24:69.19:0,69,989	0/0:9,0:9:27.09:0,27,404	0/0:14,0:14:42.13:0,42,603	0/0:17,0:17:48.16:0,48,714	0/0:6,0:6:18.06:0,18,269	0/0:11,0:11:33.11:0,33,484	0/0:9,0:9:27.09:0,27,404	0/0:10,0:10:30.08:0,30,428	0/0:12,0:12:36.12:0,36,537	0/0:27,0:27:81.24:0,81,1171	0/0:22,0:22:66.22:0,66,989
chr10	3046677	.	TTC	T	1292.95	PASS	AB=0.942;AC=20;AF=0.357;AN=56;BaseQRankSum=3.608;DP=734;FS=1.131;HRun=0;HaplotypeScore=115.9294;InbreedingCoeff=0.1161;MQ=65.84;MQ0=6;MQRankSum=-0.471;QD=3.37;ReadPosRankSum=4.401;VQSLOD=2.4253;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:17,3:20:32.89:284,33,0	0/1:14,1:15:37:37,0,182	1/1:31,0:25:2.63:14,3,0	0/0:22,0:16:2.89:0,3,24	0/0:28,0:28:13.08:0,13,564	0/1:23,0:23:24.80:25,0,185	0/1:15,0:16:17.67:18,0,207	0/0:57,0:53:22.90:0,23,143	0/1:31,0:32:66.45:66,0,453	0/0:37,0:37:10.98:0,11,605	0/0:22,0:22:0.60:0,1,447	0/1:28,1:29:71.57:72,0,371	0/1:34,1:36:3.61:4,0,702	0/0:27,1:28:32.79:0,33,620	1/1:19,4:27:47.47:395,47,0	0/1:25,1:28:41.89:42,0,558	1/1:22,0:22:22.75:115,23,0	0/0:17,1:19:5.49:0,5,358	0/0:19,0:19:8.09:0,8,177	0/1:28,5:34:66.56:67,0,436	0/1:19,2:20:25:25,0,253	0/1:22,1:24:44.02:44,0,397	0/0:22,0:22:21.31:0,21,362	0/0:22,0:22:14.14:0,14,393	1/1:20,3:24:26.88:264,27,0	0/0:36,0:35:50.69:0,51,420	0/0:29,0:29:31.04:0,31,221	0/0:9,0:9:5.95:0,6,68
chr10	3046708	.	TCTCTCA	T	914.74	PASS	AB=1.000;AC=8;AF=0.143;AN=56;BaseQRankSum=4.024;DP=830;FS=10.350;HRun=0;HaplotypeScore=191.3811;InbreedingCoeff=0.1193;MQ=53.11;MQ0=10;MQRankSum=0.411;QD=4.51;ReadPosRankSum=-2.445;VQSLOD=1.2387;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:39,0:37:99:179,0,358	0/0:9,0:9:11.10:0,11,537	0/0:18,0:6:12.21:0,12,100	0/0:26,0:12:29.86:0,30,312	0/0:39,0:39:99:0,99,1998	0/0:25,0:25:60.08:0,60,1166	0/0:26,0:26:11.94:0,12,1009	0/0:56,0:48:99:0,111,1248	0/0:33,0:33:61.73:0,62,1773	0/0:40,0:40:99:0,117,2395	0/0:28,0:28:72.58:0,73,1627	0/0:29,0:29:38.78:0,39,1681	0/0:43,0:43:68.14:0,68,2551	0/0:38,0:38:56.13:0,56,2184	0/1:43,0:41:37.49:37,0,580	0/0:35,0:35:91.13:0,91,2020	1/1:2,27:29:24.08:577,24,0	0/0:23,0:23:45.26:0,45,1271	0/0:21,0:21:48.97:0,49,776	0/0:35,0:34:81.65:0,82,1813	0/0:27,0:25:66.07:0,66,1070	0/0:30,0:30:63.49:0,63,1508	0/0:22,0:22:60.05:0,60,1245	0/0:24,0:23:63.11:0,63,1522	0/1:22,0:22:9.51:10,0,512	0/1:32,0:31:80:80,0,833	0/1:30,0:30:99:139,0,456	0/1:8,0:8:32.82:33,0,103
chr10	3046775	.	CACTT	C	4118.23	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.860;DP=873;FS=3.474;HRun=0;HaplotypeScore=145.8901;InbreedingCoeff=0.9994;MQ=71.18;MQ0=3;MQRankSum=-2.092;QD=46.27;ReadPosRankSum=2.721;VQSLOD=4.3592;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:33:93.32:0,93,2546	0/0:9,0:9:27.06:0,27,679	0/0:51,0:38:99:0,107,2430	0/0:45,0:37:99:0,102,2379	0/0:31,0:31:93.31:0,93,2424	0/0:19,0:19:54.18:0,54,1435	0/0:26,0:26:78.25:0,78,1958	0/0:42,0:41:99:0,114,2941	0/0:38,0:38:99:0,114,3041	0/0:42,0:42:99:0,126,3389	0/0:23,0:23:66.21:0,66,1687	0/0:36,0:36:99:0,108,2829	0/0:41,0:41:99:0,117,3053	0/0:30,0:30:90.29:0,90,2327	1/1:2,48:50:99:2374,123,0	0/0:30,0:30:90.31:0,90,2455	0/0:38,0:38:68.93:0,69,1682	1/1:1,20:21:45.15:872,45,0	0/0:19,0:19:57.20:0,57,1452	0/0:24,0:24:72.25:0,72,1882	0/0:50,0:50:99:0,151,4053	0/0:30,0:30:90.31:0,90,2390	0/0:26,0:26:75.26:0,75,2021	0/0:31,0:31:90.31:0,90,2423	1/1:0,18:18:45.15:872,45,0	0/0:34,0:34:99:0,102,2616	0/0:24,0:23:69.24:0,69,1845	0/0:10,0:10:30.10:0,30,822
chr10	3049215	.	A	AT	5768.63	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=13.286;DP=664;FS=1.972;HRun=4;HaplotypeScore=101.1429;InbreedingCoeff=0.9822;MQ=88.09;MQ0=0;MQRankSum=-6.416;QD=36.51;ReadPosRankSum=-0.626;VQSLOD=4.0920;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,108,1224	0/0:13,0:13:30.08:0,30,339	0/0:26,0:26:32.14:0,32,544	0/0:22,0:23:32.24:0,32,493	0/0:28,0:28:81.23:0,81,919	0/0:22,0:22:63.14:0,63,686	0/0:31,0:31:90.17:0,90,976	1/1:3,26:29:78.25:1050,78,0	0/0:25,0:25:75.20:0,75,840	0/0:27,0:27:75.20:0,75,838	0/0:18,0:18:51.13:0,51,569	0/0:30,0:30:75.21:0,75,851	0/0:30,0:30:87.23:0,87,977	0/0:16,0:16:39.09:0,39,432	1/1:0,15:14:45.15:616,45,0	0/0:21,0:21:60.17:0,60,680	1/1:1,21:22:60.20:816,60,0	1/1:1,20:21:51.17:695,51,0	0/0:23,0:23:66.17:0,66,738	0/0:25,0:25:60.16:0,60,672	0/0:38,0:38:99:0,102,1157	0/0:18,0:18:54.14:0,54,602	0/0:16,0:16:48.12:0,48,534	0/0:36,0:36:99:0,102,1147	1/1:0,25:25:69.23:943,69,0	1/1:4,15:19:48.13:635,48,0	1/1:6,19:24:69.23:931,69,0	1/1:0,2:2:6.02:82,6,0
chr10	3049232	.	GGGTCCCA	G	2815.56	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.106;DP=667;FS=2.133;HRun=0;HaplotypeScore=186.4127;InbreedingCoeff=0.9614;MQ=81.92;MQ0=0;MQRankSum=-9.600;QD=65.48;ReadPosRankSum=1.596;VQSLOD=3.9925;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,126,4960	0/0:13,0:13:39.13:0,39,1596	0/0:13,0:13:36.08:0,36,1314	0/0:25,0:25:71.86:0,72,2305	0/0:32,0:32:90.31:0,90,3570	0/0:20,0:20:57.20:0,57,2209	0/0:32,0:32:90.31:0,90,3662	0/0:32,0:32:96.32:0,96,3703	0/0:30,0:30:90.31:0,90,3622	0/0:23,0:23:63.22:0,63,2569	0/0:16,0:16:48.16:0,48,1942	0/0:30,0:30:90.31:0,90,3547	0/0:34,0:34:99:0,102,4026	0/0:16,0:16:45.14:0,45,1697	0/0:19,0:18:57.20:0,57,2334	0/0:28,0:28:84.28:0,84,3261	0/0:20,0:20:60.21:0,60,2455	0/0:20,0:20:54.19:0,54,2147	0/0:20,0:20:60.20:0,60,2282	0/0:22,0:22:66.23:0,66,2639	0/0:39,0:39:99:0,114,4484	0/0:21,0:21:63.22:0,63,2475	0/0:16,0:16:48.16:0,48,1901	0/0:35,0:35:99:0,99,3970	0/0:25,0:25:72.25:0,72,2769	1/1:2,16:18:48.16:1257,48,0	1/1:4,19:22:57.19:1532,57,0	1/1:0,2:2:6.02:162,6,0
chr10	3050548	.	CAGAGAG	C	3161.39	PASS	AB=0.887;AC=11;AF=0.196;AN=56;BaseQRankSum=14.293;DP=892;FS=7.806;HRun=0;HaplotypeScore=272.9265;InbreedingCoeff=0.3965;MQ=53.78;MQ0=10;MQRankSum=-12.376;QD=15.20;ReadPosRankSum=-0.090;VQSLOD=1.5255;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,111,1564	0/0:18,0:18:54.17:0,54,1620	0/0:33,0:20:52.93:0,53,943	0/0:57,0:33:63.13:0,63,1170	0/0:39,0:39:99:0,111,3226	0/0:27,0:27:78.12:0,78,2127	0/0:32,0:32:78.15:0,78,2108	1/1:35,0:34:22.50:404,23,0	0/0:37,0:37:99:0,102,3054	0/0:35,0:35:96.32:0,96,2901	0/0:24,0:24:72.19:0,72,1955	0/0:30,0:30:84.14:0,84,2221	0/0:42,0:42:99:0,123,3432	0/0:26,0:26:75.22:0,75,2295	0/1:36,1:38:40.82:83,0,41	0/0:41,0:42:99:0,112,3557	0/1:24,0:25:85.95:86,0,86	0/1:12,1:13:55.34:83,0,55	0/0:30,0:28:81.22:0,81,1843	0/0:46,0:45:99:0,129,3561	0/0:37,0:37:99:0,99,2445	0/0:19,0:19:51.16:0,51,1406	0/0:25,0:25:69.22:0,69,2160	0/0:30,0:30:69.24:0,69,2158	0/1:24,0:25:8.17:8,0,14	0/1:16,21:38:53.15:1733,0,53	1/1:10,17:29:36.29:862,36,0	1/1:5,0:5:3.01:61,3,0
chr10	3050560	.	CAG	C	1040.74	PASS	AB=0.989;AC=9;AF=0.161;AN=56;BaseQRankSum=14.499;DP=905;FS=5.194;HRun=0;HaplotypeScore=213.7511;InbreedingCoeff=0.4575;MQ=52.40;MQ0=17;MQRankSum=-8.680;QD=5.15;ReadPosRankSum=5.024;VQSLOD=2.7271;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:61,0:61:2.14:2,0,475	0/0:18,0:18:54.17:0,54,915	0/0:31,0:17:45.07:0,45,612	0/0:63,0:25:47.14:0,47,598	0/0:39,0:39:99:0,110,1921	0/0:31,0:31:87.21:0,87,1366	0/0:31,0:31:84.26:0,84,1366	0/1:29,1:27:84.70:104,0,85	0/0:35,0:35:96.33:0,96,1683	0/0:39,0:39:99:0,117,2018	0/0:26,0:26:69.20:0,69,1146	0/0:26,0:26:72.23:0,72,1225	0/0:44,0:44:99:0,119,2078	0/0:26,0:26:75.24:0,75,1306	0/1:42,0:42:0.59:1,0,117	0/0:43,0:43:99:0,124,2132	0/0:27,0:27:1.26:0,1,201	0/0:14,0:14:9.35:0,9,199	0/0:27,0:24:69.21:0,69,1112	0/0:47,0:46:99:0,122,2030	0/0:36,0:36:90.24:0,90,1484	0/0:20,0:20:57.18:0,57,932	0/0:27,0:27:78.27:0,78,1355	0/0:29,0:29:74.98:0,75,1286	0/0:24,0:24:0.79:0,1,39	1/1:29,6:35:1.74:639,2,0	1/1:22,7:29:41.46:379,41,0	1/1:4,1:5:3.01:42,3,0
chr10	3050562	.	GAGAC	G	3584.37	PASS	AB=0.789;AC=17;AF=0.304;AN=56;BaseQRankSum=13.360;DP=900;FS=6.352;HRun=0;HaplotypeScore=231.5224;InbreedingCoeff=0.8286;MQ=52.44;MQ0=18;MQRankSum=-7.797;QD=13.68;ReadPosRankSum=2.022;VQSLOD=2.4632;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:21,38:59:60.47:990,60,0	0/0:18,0:18:42.14:0,42,992	0/0:31,0:16:11.99:0,12,229	0/0:63,0:25:8.98:0,9,149	0/0:38,0:38:86.97:0,87,2046	0/0:31,0:31:66.21:0,66,1363	0/0:33,0:33:60.18:0,60,1281	1/1:24,4:25:27.09:385,27,0	0/0:35,0:35:75.23:0,75,1686	0/0:39,0:39:99:0,102,2391	0/0:26,0:26:57.20:0,57,1317	0/0:25,0:25:53.96:0,54,1175	0/0:42,2:44:3.32:0,3,2123	0/0:26,0:26:63.22:0,63,1536	1/1:14,27:41:13.97:245,14,0	0/0:44,0:44:99:0,105,2365	1/1:20,7:27:15.04:210,15,0	0/1:11,4:15:4.72:244,0,5	0/0:27,0:24:39.07:0,39,835	0/0:46,0:45:99:0,111,2504	0/0:33,0:33:60.19:0,60,1352	0/0:20,0:20:39.13:0,39,877	0/0:26,0:26:66.23:0,66,1574	0/0:32,0:32:69.02:0,69,1524	1/1:13,11:24:2.05:49,2,0	1/1:13,21:34:72.05:974,72,0	1/1:10,18:28:33.09:446,33,0	1/1:6,0:6:3.01:42,3,0
chr10	3050566	.	C	CAG	801.92	PASS	AB=0.888;AC=9;AF=0.161;AN=56;BaseQRankSum=9.312;DP=892;FS=13.952;HRun=0;HaplotypeScore=205.2449;InbreedingCoeff=0.1820;MQ=52.55;MQ0=19;MQRankSum=-8.171;QD=3.87;ReadPosRankSum=0.093;VQSLOD=1.1729;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:57:87.53:0,88,671	0/0:17,0:17:48.16:0,48,686	0/0:28,0:13:23.87:0,24,301	0/0:58,0:21:23.69:0,24,291	0/0:39,0:39:99:0,102,1441	0/0:28,0:28:81.27:0,81,1154	0/0:33,0:33:82.14:0,82,1140	0/1:22,5:24:99:251,0,262	0/0:36,0:36:96.28:0,96,1316	0/0:42,0:42:99:0,114,1602	0/0:22,0:22:66.22:0,66,941	0/0:24,0:24:63.17:0,63,862	0/0:44,0:44:99:0,132,1810	0/0:25,0:25:72.11:0,72,1003	0/1:35,4:39:33.22:112,0,33	0/0:44,0:44:99:0,115,1691	0/1:19,8:28:79.37:79,0,152	0/1:11,4:15:89.29:89,0,115	0/0:29,0:25:60.18:0,60,813	0/0:44,0:43:99:0,120,1703	0/0:34,0:34:81.19:0,81,1075	0/0:19,0:19:51.13:0,51,706	0/0:26,0:26:72.24:0,72,1031	0/0:34,0:34:81.27:0,81,1152	0/1:21,2:23:0.66:1,0,1	0/1:38,0:38:98.15:231,0,98	1/1:30,0:30:7.65:119,8,0	0/1:7,0:7:3.93:57,0,4
chr10	3055231	.	AACACACACACACACAC	A	4694.09	PASS	AB=0.699;AC=11;AF=0.196;AN=56;BaseQRankSum=10.569;DP=660;FS=5.957;HRun=0;HaplotypeScore=258.6816;InbreedingCoeff=0.6057;MQ=62.88;MQ0=11;MQRankSum=-10.643;QD=30.68;ReadPosRankSum=-0.216;VQSLOD=3.1648;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:63.22:0,63,3900	0/0:7,0:8:15.05:0,15,1048	0/0:26,0:15:3.01:0,3,42	0/0:23,0:17:9.02:0,9,204	0/0:22,0:27:60.18:0,60,3702	0/0:21,0:25:36.12:0,36,2021	0/0:23,0:28:42.04:0,42,2308	0/0:18,0:16:23.95:0,24,333	0/0:25,0:26:42.62:0,43,2829	0/0:21,0:22:38.34:0,38,2036	0/0:19,0:21:36.11:0,36,2378	0/0:27,0:26:44.50:0,44,3062	0/0:16,0:21:30.05:0,30,1399	0/0:31,0:31:63.19:0,63,3654	1/1:8,15:23:39.13:1656,39,0	0/0:25,0:24:54.17:0,54,3075	0/1:8,0:16:99:271,0,118	1/1:12,9:21:15.05:660,15,0	0/0:18,0:18:26.68:0,27,1438	0/0:12,0:15:21.07:0,21,1514	0/0:24,0:22:42.14:0,42,2701	0/0:22,0:22:43.36:0,43,2314	0/0:30,0:30:60.17:0,60,3555	0/0:31,0:31:60.21:0,60,3907	1/1:11,24:34:39.13:1711,39,0	0/1:15,0:22:67.24:67,0,188	0/1:13,0:24:64.09:199,0,64	1/1:2,0:10:12.03:130,12,0
chr10	3056261	.	AT	A	762.17	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.535;DP=556;FS=7.426;HRun=7;HaplotypeScore=55.5467;InbreedingCoeff=0.9710;MQ=83.25;MQ0=0;MQRankSum=-1.901;QD=22.42;ReadPosRankSum=-2.534;VQSLOD=2.3047;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:75.17:0,75,899	0/0:6,0:6:15.05:0,15,189	0/0:22,0:22:44.46:0,44,488	0/0:20,0:20:20.77:0,21,529	0/0:30,0:30:87.27:0,87,1082	0/0:24,0:24:69.19:0,69,848	0/0:15,0:15:39.12:0,39,490	1/1:6,28:34:84.19:857,84,0	0/0:16,0:16:45.14:0,45,566	0/0:18,0:18:51.15:0,51,622	0/0:11,0:11:30.10:0,30,377	0/0:12,0:12:30.10:0,30,377	0/0:18,0:18:54.17:0,54,679	0/0:7,0:7:18.04:0,18,213	0/0:18,0:18:54.16:0,54,666	0/0:10,0:10:30.10:0,30,377	0/0:25,0:25:75.24:0,75,943	0/0:38,0:38:97.51:0,98,1190	0/0:19,0:19:51.16:0,51,638	0/0:22,0:22:63.19:0,63,776	0/0:17,0:17:51.14:0,51,616	0/0:19,0:19:51.15:0,51,631	0/0:25,0:25:69.19:0,69,840	0/0:15,0:15:45.14:0,45,566	0/0:25,0:25:66.20:0,66,819	0/0:25,0:25:72.23:0,72,906	0/0:26,0:26:75.21:0,75,917	0/0:13,0:13:36.12:0,36,452
chr10	3058082	.	GA	G	4719.19	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=10.983;DP=678;FS=4.774;HRun=10;HaplotypeScore=73.7610;InbreedingCoeff=0.9976;MQ=74.64;MQ0=2;MQRankSum=-1.939;QD=21.45;ReadPosRankSum=4.230;VQSLOD=5.7673;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,38:43:71.77:852,72,0	0/0:8,0:8:21.06:0,21,232	0/0:24,0:19:27.45:0,27,308	0/0:19,0:17:22.83:0,23,231	0/0:38,1:39:67.32:0,67,962	0/0:18,0:19:53.98:0,54,578	0/0:14,2:16:19.05:0,19,430	0/0:3,0:23:52.62:0,53,294	0/0:24,0:24:72.18:0,72,788	0/0:29,0:29:84.22:0,84,922	0/0:18,0:18:45.12:0,45,498	0/0:29,1:30:58.16:0,58,862	0/0:19,0:20:47.95:0,48,503	0/0:24,0:24:69.17:0,69,750	1/1:2,23:25:65.98:573,66,0	0/0:24,1:25:37.11:0,37,638	1/1:3,23:26:62.98:547,63,0	1/1:5,24:29:44.76:611,45,0	0/0:30,1:31:58.17:0,58,870	0/0:25,0:25:65.84:0,66,701	0/0:14,0:14:39.11:0,39,431	0/0:28,0:28:75.19:0,75,822	0/0:20,0:20:54.15:0,54,597	0/0:22,0:22:54.15:0,54,597	1/1:4,24:29:71.01:605,71,0	1/1:1,26:27:47.78:639,48,0	1/1:2,20:22:53.97:469,54,0	1/1:0,18:19:50.03:423,50,0
chr10	3058488	.	T	TA	310	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-2.359;DP=472;FS=1.030;HRun=9;HaplotypeScore=67.3293;InbreedingCoeff=0.7138;MQ=79.24;MQ0=2;MQRankSum=-3.292;QD=16.32;ReadPosRankSum=-1.402;VQSLOD=3.5294;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,15:19:39.02:405,39,0	0/0:5,0:5:8.99:0,9,78	0/0:18,0:13:7.84:0,8,181	0/0:25,0:25:26.66:0,27,230	0/0:29,0:30:65.88:0,66,573	0/0:21,0:21:56.96:0,57,490	0/0:14,0:14:32.98:0,33,287	0/0:33,0:32:59.92:0,60,519	0/0:13,0:13:32.97:0,33,283	0/0:21,0:21:59.99:0,60,521	0/0:22,0:22:50.95:0,51,439	0/0:14,0:14:38.99:0,39,339	0/0:11,0:11:32.97:0,33,281	0/0:10,0:10:29.99:0,30,260	0/0:11,0:11:26.99:0,27,234	0/0:11,0:11:29.99:0,30,260	0/0:24,0:24:62.96:0,63,541	0/0:20,0:20:44.98:0,45,391	0/0:23,0:23:53.95:0,54,462	0/0:9,0:9:23.98:0,24,208	0/0:1,0:1:3:0,3,26	0/0:3,0:4:8.03:0,8,58	0/0:13,0:13:20.99:0,21,182	0/0:10,0:10:23.99:0,24,208	0/0:13,0:13:26.98:0,27,231	0/0:27,0:28:49.96:0,50,418	0/0:33,0:31:83.98:0,84,729	0/0:16,0:16:32.78:0,33,286
chr10	3058509	.	AT	A	6228.67	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=10.445;DP=440;FS=0.366;HRun=1;HaplotypeScore=44.1617;InbreedingCoeff=0.9828;MQ=73.84;MQ0=2;MQRankSum=-1.417;QD=37.08;ReadPosRankSum=1.366;VQSLOD=4.7147;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:54.16:0,54,749	0/0:4,0:4:12.04:0,12,171	0/0:18,0:14:37.86:0,38,438	0/0:12,0:12:26.99:0,27,342	0/0:23,0:23:66.12:0,66,880	0/0:19,0:19:57.16:0,57,777	0/0:13,0:13:39.13:0,39,557	1/1:1,32:33:96.26:1255,96,0	0/0:11,0:11:33.11:0,33,464	0/0:21,0:21:63.19:0,63,855	0/0:19,0:19:48.09:0,48,656	0/0:12,0:12:36.12:0,36,513	0/0:13,0:13:39.09:0,39,502	0/0:12,0:12:36.12:0,36,505	1/1:0,12:12:27.09:377,27,0	0/0:14,0:14:42.13:0,42,583	1/1:0,26:26:69.23:954,69,0	1/1:0,18:18:45.15:627,45,0	0/0:21,0:21:63.19:0,63,868	0/0:11,0:11:33.10:0,33,454	0/0:3,0:3:9.02:0,9,111	0/0:6,0:6:18.03:0,18,220	0/0:12,0:12:36.06:0,36,456	0/0:9,0:9:27.09:0,27,386	1/1:0,17:17:48.16:667,48,0	1/1:0,21:21:63.18:843,63,0	1/1:0,30:30:81.27:1129,81,0	1/1:3,8:11:24.25:377,24,0
chr10	3058838	.	GCA	G	1801.89	PASS	AB=0.917;AC=23;AF=0.442;AN=52;BaseQRankSum=5.610;DP=750;FS=0.000;HRun=0;HaplotypeScore=189.6996;InbreedingCoeff=0.1702;MQ=57.36;MQ0=15;MQRankSum=-6.183;QD=3.56;ReadPosRankSum=0.521;VQSLOD=2.3787;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:31,11:43:35.16:309,35,0	0/0:4,0:4:6.02:0,6,91	./.	./.	0/1:14,3:17:23.24:23,0,272	0/1:23,3:26:55.14:55,0,308	0/1:30,4:34:32.50:33,0,170	1/1:25,1:26:9.77:194,10,0	0/1:33,2:37:9.84:10,0,482	0/1:27,1:28:39.47:39,0,380	0/0:19,0:19:24.03:0,24,294	0/0:24,3:28:18.13:0,18,436	0/0:40,2:42:28.47:0,28,603	0/1:27,1:28:3.97:4,0,432	1/1:40,0:48:26.99:248,27,0	0/1:33,4:37:61.15:61,0,426	0/1:23,0:23:1.60:57,0,2	1/1:16,0:16:6.04:95,6,0	0/1:13,1:10:10.27:28,0,10	0/0:13,0:13:22.31:0,22,292	0/1:42,4:44:39.25:39,0,297	0/0:31,3:33:11.30:0,11,540	0/0:11,0:11:9.03:0,9,137	0/0:43,1:45:18.04:0,18,664	1/1:22,0:27:18:168,18,0	1/1:24,0:24:32.36:309,32,0	0/1:22,3:25:0.67:303,0,1	0/0:3,0:3:2.99:0,3,24
chr10	3058874	.	AAACACAT	A	1261.10	PASS	AB=0.974;AC=7;AF=0.130;AN=54;BaseQRankSum=4.101;DP=879;FS=0.491;HRun=0;HaplotypeScore=301.3507;InbreedingCoeff=0.2267;MQ=48.30;MQ0=23;MQRankSum=-2.210;QD=7.60;ReadPosRankSum=5.379;VQSLOD=1.7434;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:45:45.54:0,46,281	0/0:9,0:9:18.21:0,18,198	./.	0/0:14,0:2:5.98:0,6,49	0/0:29,0:27:40.61:0,41,432	0/0:28,0:27:32.81:0,33,374	0/0:43,0:40:16.21:0,16,249	0/0:55,0:52:99:0,124,1567	0/0:39,0:39:61.77:0,62,755	0/0:36,0:32:76.91:0,77,995	0/0:27,0:27:42.96:0,43,395	0/0:36,0:36:45.13:0,45,543	0/0:42,0:42:42.38:0,42,788	0/0:33,0:32:45.10:0,45,590	0/1:43,0:42:80.14:156,0,80	0/0:39,0:38:40.63:0,41,516	0/1:28,0:28:69.08:69,0,145	0/0:25,0:24:0.09:0,0,211	0/0:19,0:12:33.03:0,33,356	0/0:17,0:17:44.83:0,45,481	0/0:53,0:44:25.17:0,25,418	0/0:42,0:41:66.36:0,66,698	0/0:23,0:23:27.62:0,28,378	0/0:49,0:49:36.04:0,36,883	0/1:25,0:23:10.75:75,0,11	0/1:34,6:36:33.16:535,0,33	1/1:22,5:26:11.74:545,12,0	0/1:3,0:3:2.04:12,0,2
chr10	3058875	.	AACACAT	A	2570.88	PASS	AB=1.000;AC=18;AF=0.333;AN=54;BaseQRankSum=-0.057;DP=879;FS=2.105;HRun=0;HaplotypeScore=285.6940;InbreedingCoeff=0.2828;MQ=48.36;MQ0=23;MQRankSum=-2.708;QD=6.14;ReadPosRankSum=2.451;VQSLOD=2.3693;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:44:8.94:0,9,62	0/0:10,0:10:2.24:0,2,32	./.	0/1:14,0:2:6.08:6,0,11	0/0:29,0:27:6.72:0,7,125	0/0:27,0:26:12.23:0,12,115	0/1:43,0:40:16.17:16,0,41	0/0:56,0:53:73.07:0,73,453	0/0:38,0:38:33.10:0,33,174	0/1:35,0:31:28.34:28,0,117	0/0:27,0:27:8.48:0,8,30	0/0:37,0:37:29.87:0,30,129	0/1:42,0:42:22.71:23,0,158	0/0:33,0:32:26.35:0,26,127	1/1:42,0:41:9.33:133,9,0	0/1:40,0:39:2:2,0,60	0/1:29,0:30:33.21:85,0,33	0/1:25,0:24:35.52:36,0,37	0/0:18,0:11:22.04:0,22,101	0/0:18,0:18:19.01:0,19,74	0/1:53,0:45:8.97:9,0,82	0/0:41,0:40:30.12:0,30,96	0/0:23,0:23:17.44:0,17,100	0/0:49,0:49:20.71:0,21,230	1/1:24,0:23:7.92:74,8,0	1/1:16,24:36:82.52:1258,83,0	1/1:28,0:27:62.64:976,63,0	1/1:3,0:3:6.02:98,6,0
chr10	3058879	.	CAT	C	1597.83	PASS	AB=0.985;AC=29;AF=0.537;AN=54;BaseQRankSum=7.215;DP=873;FS=10.912;HRun=0;HaplotypeScore=249.2078;InbreedingCoeff=-0.3389;MQ=48.66;MQ0=24;MQRankSum=-4.113;QD=2.06;ReadPosRankSum=-4.686;VQSLOD=0.0852;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:45,0:44:54.98:55,0,65	0/1:9,1:10:2.49:2,0,29	./.	0/0:15,0:2:4.48:0,4,21	0/1:28,0:26:61.34:61,0,77	0/1:25,1:25:17.88:18,0,65	0/1:43,0:40:8.35:8,0,50	0/0:57,0:53:44.05:0,44,391	0/1:38,0:38:45.08:45,0,106	0/1:35,0:31:3.79:4,0,187	0/1:26,0:26:9.09:62,0,9	0/1:37,1:38:23.74:24,0,81	0/1:41,1:42:53.63:54,0,93	0/1:30,2:31:20.21:20,0,59	1/1:41,0:40:48.70:361,49,0	0/1:39,0:38:21.24:21,0,67	0/1:30,0:30:31.84:42,0,32	0/1:29,0:28:18.46:112,0,18	0/0:18,0:10:14.21:0,14,99	0/1:17,0:17:34.49:36,0,34	0/1:52,0:44:19.68:63,0,20	0/1:38,2:39:47.84:104,0,48	0/1:24,0:24:2.39:2,0,68	0/1:47,0:47:3.92:4,0,177	1/1:23,0:22:31.89:225,32,0	1/1:39,0:35:11.02:196,11,0	1/1:26,0:25:39.46:234,39,0	1/1:4,0:4:0.26:0,1,0
chr10	3058881	.	TACAC	T	14038.74	PASS	AB=0.742;AC=47;AF=0.870;AN=54;BaseQRankSum=-2.998;DP=873;FS=17.306;HRun=0;HaplotypeScore=219.7804;InbreedingCoeff=0.1595;MQ=49.07;MQ0=23;MQRankSum=-0.320;QD=16.34;ReadPosRankSum=2.743;VQSLOD=2.8442;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,31:44:4.18:417,4,0	1/1:2,7:9:14.29:181,14,0	./.	0/1:17,0:3:9.98:10,0,45	1/1:8,19:25:24.96:440,25,0	1/1:7,18:24:21.03:358,21,0	1/1:13,33:43:13.85:210,14,0	1/1:21,35:52:99:1528,105,0	1/1:7,30:38:54.18:912,54,0	1/1:7,27:31:60.19:1228,60,0	1/1:3,23:26:27.04:435,27,0	1/1:6,33:39:35.63:610,36,0	1/1:6,36:42:51.16:825,51,0	1/1:7,25:31:33.10:556,33,0	1/1:10,32:41:60.20:972,60,0	1/1:7,32:38:33.11:579,33,0	0/1:5,23:28:2.85:358,0,3	0/1:9,19:27:17.80:282,0,18	1/1:10,7:10:21.03:318,21,0	1/1:3,14:17:30.10:507,30,0	0/1:16,36:47:3.17:284,0,3	1/1:6,34:39:60.09:1036,60,0	1/1:3,22:25:23.69:401,24,0	1/1:10,36:47:42.87:768,43,0	1/1:8,14:22:33.10:503,33,0	0/1:38,1:35:59.37:177,0,59	1/1:25,0:24:20.43:144,20,0	0/0:5,0:5:5.18:0,5,57
chr10	3058891	.	CACAT	C	7672.28	PASS	AB=0.989;AC=36;AF=0.643;AN=56;BaseQRankSum=7.309;DP=859;FS=8.181;HRun=0;HaplotypeScore=224.5610;InbreedingCoeff=-0.2361;MQ=51.31;MQ0=21;MQRankSum=-3.981;QD=9.32;ReadPosRankSum=8.857;VQSLOD=2.1838;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:41,0:40:16.36:217,0,16	1/1:9,0:9:5.20:87,5,0	0/1:18,0:4:5.06:5,0,49	0/0:30,0:12:18.19:0,18,216	0/1:27,0:25:57.01:234,0,57	1/1:20,0:20:20.99:210,21,0	0/1:45,0:42:62.24:111,0,62	0/1:47,0:44:14.94:729,0,15	1/1:36,0:36:12.08:528,12,0	1/1:32,1:30:36.48:705,36,0	1/1:23,1:24:26.39:259,26,0	1/1:34,1:35:35.50:362,36,0	1/1:39,1:40:9:507,9,0	1/1:29,0:28:33:321,33,0	0/1:42,0:41:4.96:551,0,5	0/1:36,2:37:32.96:281,0,33	0/1:27,0:27:11.45:233,0,11	0/1:29,0:29:70.25:160,0,70	0/1:18,0:11:21.10:153,0,21	0/1:16,2:18:13.91:300,0,14	0/1:52,0:43:38.10:167,0,38	1/1:40,1:40:23.80:599,24,0	1/1:23,1:24:3.55:195,4,0	0/1:42,1:44:15.32:445,0,15	0/1:23,0:23:33.16:274,0,33	0/1:41,0:37:15.93:16,0,444	0/1:22,0:21:24.72:25,0,147	0/0:6,0:6:14.90:0,15,151
chr10	3060476	.	TGAGAG	T	1660.58	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.958;DP=683;FS=2.600;HRun=0;HaplotypeScore=126.4102;InbreedingCoeff=0.9700;MQ=94.21;MQ0=0;MQRankSum=-6.961;QD=57.26;ReadPosRankSum=-1.758;VQSLOD=3.4775;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,114,3482	0/0:11,0:11:33.11:0,33,1066	0/0:32,0:32:93.32:0,93,2908	0/0:30,0:30:89.91:0,90,2317	0/0:26,0:26:78.27:0,78,2490	0/0:25,0:25:72.25:0,72,2285	0/0:29,0:29:87.28:0,87,2733	1/1:2,27:29:81.28:1755,81,0	0/0:19,0:19:57.20:0,57,1800	0/0:22,0:22:66.23:0,66,2046	0/0:16,0:16:45.15:0,45,1447	0/0:23,0:23:69.21:0,69,2064	0/0:33,0:33:99:0,99,3063	0/0:20,0:20:60.21:0,60,1828	0/0:33,0:33:96.33:0,96,3042	0/0:20,0:20:60.21:0,60,1861	0/0:38,0:38:99:0,114,3454	0/0:19,0:19:57.20:0,57,1834	0/0:14,0:14:42.14:0,42,1356	0/0:22,0:22:63.20:0,63,1944	0/0:34,0:34:99:0,102,3279	0/0:22,0:22:66.23:0,66,2081	0/0:14,0:14:42.13:0,42,1271	0/0:37,0:37:99:0,111,3364	0/0:18,0:18:54.19:0,54,1702	0/0:19,0:19:57.20:0,57,1816	0/0:35,0:35:99:0,105,3310	0/0:4,0:4:12.04:0,12,387
chr10	3063331	.	TG	T	1611.59	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=6.640;DP=534;FS=3.073;HRun=10;HaplotypeScore=61.6984;InbreedingCoeff=0.9400;MQ=74.92;MQ0=0;MQRankSum=0.388;QD=18.52;ReadPosRankSum=1.102;VQSLOD=4.4367;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:33:71.95:0,72,739	0/0:7,0:7:21.05:0,21,224	0/0:14,0:14:20.89:0,21,194	0/0:13,0:13:21.05:0,21,223	0/0:16,0:16:18.05:0,18,199	0/0:16,0:16:39.11:0,39,431	0/0:19,0:20:35.93:0,36,379	1/1:6,11:18:26.98:234,27,0	0/0:15,1:16:19.93:0,20,422	0/0:16,0:16:21.06:0,21,232	0/0:14,0:14:30.07:0,30,323	0/0:19,0:19:45.12:0,45,498	0/0:26,0:26:75.20:0,75,829	0/0:20,1:21:24.89:0,25,469	1/1:3,23:26:65.98:573,66,0	0/0:21,0:22:53.96:0,54,568	0/0:7,0:20:0:0,0,0	1/1:2,22:24:65.97:573,66,0	0/0:16,0:16:36.04:0,36,370	0/0:13,0:13:33.09:0,33,363	0/0:23,0:22:42.10:0,42,456	0/0:14,0:14:33.07:0,33,356	0/0:18,0:18:39.11:0,39,431	0/0:35,1:36:67.12:0,67,931	1/1:0,19:19:44.99:391,45,0	0/0:19,1:20:42.09:0,42,449	0/0:28,0:28:75.16:0,75,804	0/0:6,0:6:12.03:0,12,133
chr10	3063538	.	AT	A	4023.57	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=9.844;DP=535;FS=3.749;HRun=8;HaplotypeScore=54.2767;InbreedingCoeff=0.9887;MQ=83.96;MQ0=0;MQRankSum=-0.276;QD=24.84;ReadPosRankSum=0.741;VQSLOD=4.4048;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:57.17:0,57,688	0/0:10,0:10:30.09:0,30,362	0/0:14,0:15:31.63:0,32,348	0/0:27,0:27:72.13:0,72,792	0/0:21,0:21:54.17:0,54,650	0/0:24,0:24:63.19:0,63,761	0/0:19,0:19:51.16:0,51,615	1/1:7,16:23:48.02:451,48,0	0/0:17,0:17:45.13:0,45,534	0/0:14,0:14:39.11:0,39,462	0/0:17,1:18:22.18:0,22,550	0/0:26,0:26:63.19:0,63,760	0/0:16,0:16:39.07:0,39,454	0/0:14,0:14:42.13:0,42,507	1/1:2,31:33:78.12:752,78,0	0/0:17,0:17:48.15:0,48,580	1/1:2,33:35:99:956,99,0	1/1:0,12:12:36.06:348,36,0	0/0:18,0:18:42.08:0,42,470	0/0:19,0:19:54.15:0,54,640	0/0:20,0:20:54.17:0,54,652	0/0:18,0:18:45.14:0,45,543	0/0:22,0:22:60.17:0,60,705	0/0:16,0:15:42.13:0,42,502	1/1:0,12:12:36.06:348,36,0	1/1:3,18:21:20.99:485,21,0	1/1:1,22:23:63.05:598,63,0	1/1:0,3:3:9.01:87,9,0
chr10	3063622	.	AGTGTGTGTGT	A	412.35	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=5.477;DP=515;FS=1.331;HRun=0;HaplotypeScore=140.7160;InbreedingCoeff=0.7156;MQ=61.62;MQ0=24;MQRankSum=-2.040;QD=5.81;ReadPosRankSum=-0.014;VQSLOD=2.2635;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,7:19:0.45:1,0,0	0/0:11,0:11:21.07:0,21,537	0/0:30,0:12:3.01:0,3,40	0/0:36,0:8:3.01:0,3,72	0/0:21,0:21:33.11:0,33,983	0/0:17,0:16:15.03:0,15,604	0/0:26,0:25:12.54:0,13,630	1/1:19,0:19:2.96:19,3,0	0/0:16,0:13:22.72:0,23,637	0/0:15,0:15:21.07:0,21,767	0/0:18,0:16:24.08:0,24,876	0/0:16,0:15:20.86:0,21,790	0/0:19,0:19:36.09:0,36,1064	0/0:19,0:19:39.59:0,40,1258	0/0:24,0:24:39.13:0,39,1656	0/0:14,0:14:18.06:0,18,691	0/0:17,0:16:15.94:0,16,483	0/0:16,0:16:27.09:0,27,828	0/0:24,0:23:10.85:0,11,298	0/0:14,0:13:21.07:0,21,683	0/0:20,0:18:15.04:0,15,573	0/0:19,0:17:21.05:0,21,740	0/0:11,0:9:12.04:0,12,488	0/0:24,0:23:30.08:0,30,1149	0/0:17,0:16:6.02:0,6,240	1/1:8,0:10:8.62:164,9,0	1/1:13,0:15:12.14:240,12,0	1/1:4,0:6:6.02:121,6,0
chr10	3063694	.	AGTGTGTGT	A	1942.43	PASS	AB=0.685;AC=12;AF=0.222;AN=54;BaseQRankSum=7.680;DP=670;FS=6.387;HRun=0;HaplotypeScore=143.5762;InbreedingCoeff=0.7501;MQ=42.22;MQ0=110;MQRankSum=-5.007;QD=11.23;ReadPosRankSum=-0.055;VQSLOD=2.2808;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:25:21.03:0,21,509	0/0:10,0:7:16.30:0,16,584	0/0:12,0:7:21.07:0,21,682	0/0:9,0:4:12.04:0,12,208	0/0:22,0:20:45.10:0,45,1337	0/0:30,0:25:41.42:0,41,1457	0/0:34,0:20:33.11:0,33,1091	0/1:21,0:30:70.35:184,0,70	0/0:18,0:15:33.11:0,33,1029	0/0:22,0:18:45.15:0,45,1609	0/0:23,0:20:33.11:0,33,1164	0/0:24,0:17:26.93:0,27,1011	0/0:18,0:14:27.68:0,28,759	0/0:23,0:17:29.71:0,30,906	1/1:17,10:25:12.04:298,12,0	0/0:30,0:25:48.64:0,49,1639	0/1:13,0:20:22.11:63,0,22	1/1:5,9:12:15.05:387,15,0	0/0:23,0:17:30.10:0,30,922	0/0:26,0:20:42.01:0,42,1278	0/0:36,0:23:36.11:0,36,1259	0/0:22,0:14:33.11:0,33,1228	0/0:21,0:15:24.55:0,25,884	0/0:32,0:24:42.14:0,42,1642	./.	1/1:21,0:19:29.03:550,29,0	1/1:17,1:26:24.72:548,25,0	1/1:8,0:6:8.59:86,9,0
chr10	3063824	.	AG	A	802.45	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.008;DP=535;FS=0.000;HRun=1;HaplotypeScore=56.9636;InbreedingCoeff=0.9936;MQ=83.46;MQ0=3;MQRankSum=-2.612;QD=26.75;ReadPosRankSum=-2.848;VQSLOD=2.6610;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:69.21:0,69,1054	0/0:12,0:12:36.08:0,36,510	0/0:21,0:21:63.19:0,63,922	0/0:16,0:16:32.99:0,33,599	0/0:11,0:11:30.10:0,30,469	0/0:16,0:16:42.11:0,42,608	0/0:30,0:30:90.31:0,90,1429	1/1:1,29:24:66.17:897,66,0	0/0:16,0:16:48.16:0,48,760	0/0:11,0:11:33.11:0,33,527	0/0:10,0:10:27.09:0,27,417	0/0:23,0:23:62.88:0,63,938	0/0:19,0:19:54.17:0,54,830	0/0:24,0:24:69.24:0,69,1100	0/0:24,0:24:60.20:0,60,949	0/0:27,0:27:81.26:0,81,1263	0/0:48,0:48:99:0,141,2190	0/0:23,0:23:66.22:0,66,1047	0/0:19,0:19:57.18:0,57,882	0/0:9,0:9:27.09:0,27,428	0/0:20,0:20:60.17:0,60,883	0/0:13,0:13:39.13:0,39,619	0/0:9,0:9:27.07:0,27,400	0/0:20,0:20:57.19:0,57,911	0/0:12,0:12:36.12:0,36,565	0/0:19,0:18:51.17:0,51,808	0/0:22,0:22:60.20:0,60,955	0/0:8,0:8:24.08:0,24,383
chr10	3065547	.	CT	C	347.83	PASS	AB=1.000;AC=23;AF=0.958;AN=24;BaseQRankSum=-1.735;DP=30;FS=0.000;HRun=1;HaplotypeScore=10.8605;InbreedingCoeff=-0.0415;MQ=104.86;MQ0=0;MQRankSum=-1.735;QD=14.49;ReadPosRankSum=1.156;VQSLOD=2.7479;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,0:3:2.92:17,3,0	./.	0/1:2,0:2:11.13:11,0,11	./.	./.	./.	1/1:0,4:4:3.01:42,3,0	1/1:0,4:4:12.02:137,12,0	./.	./.	./.	./.	1/1:1,0:1:0.47:1,0,0	1/1:1,0:1:3:29,3,0	./.	./.	1/1:0,2:2:3.01:41,3,0	1/1:1,0:1:3:28,3,0	1/1:1,0:1:3:27,3,0	./.	1/1:3,0:3:8.88:60,9,0	1/1:0,1:1:2.97:20,3,0	./.	./.	./.	./.	1/1:1,0:1:2.80:13,3,0	./.
chr10	3067970	.	GATC	G	4758.90	PASS	AB=0.521;AC=11;AF=0.196;AN=56;BaseQRankSum=13.135;DP=470;FS=4.175;HRun=0;HaplotypeScore=79.9341;InbreedingCoeff=0.8806;MQ=82.89;MQ0=0;MQRankSum=-4.364;QD=45.32;ReadPosRankSum=2.490;VQSLOD=6.7094;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,102,2283	0/0:5,0:5:15.05:0,15,355	0/0:12,0:12:36.09:0,36,784	0/0:19,0:19:54.16:0,54,1220	0/0:14,0:14:42.14:0,42,970	0/0:16,0:16:48.16:0,48,1135	0/0:18,0:18:54.19:0,54,1275	0/0:26,0:26:78.27:0,78,1824	0/0:10,0:10:30.10:0,30,709	0/0:7,0:7:18.06:0,18,426	0/0:12,0:12:36.11:0,36,800	0/0:12,0:12:36.12:0,36,851	0/0:13,0:13:39.13:0,39,903	0/0:10,0:10:30.10:0,30,707	1/1:0,15:15:45.15:793,45,0	0/0:14,0:14:42.14:0,42,993	0/0:43,0:43:99:0,129,3041	1/1:0,20:20:54.18:951,54,0	0/0:14,0:14:39.07:0,39,827	0/0:18,0:18:51.18:0,51,1205	0/0:32,0:32:87.28:0,87,1989	0/0:12,0:12:36.12:0,36,851	0/0:7,0:7:21.07:0,21,476	0/0:15,0:15:45.15:0,45,1059	1/1:1,20:21:42.14:740,42,0	0/1:2,23:25:66.67:1113,0,67	1/1:0,15:15:39.13:687,39,0	1/1:0,9:9:27.09:476,27,0
chr10	3068168	.	AT	A	832.20	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.645;DP=431;FS=18.924;HRun=8;HaplotypeScore=43.3158;InbreedingCoeff=0.8881;MQ=79.24;MQ0=0;MQRankSum=-0.707;QD=22.49;ReadPosRankSum=2.163;VQSLOD=2.1331;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,35:37:96.15:927,96,0	0/0:12,0:12:33.10:0,33,398	0/0:13,0:13:32.42:0,32,347	0/0:12,0:12:29.95:0,30,327	0/0:19,0:19:57.17:0,57,688	0/0:16,0:16:45.13:0,45,532	0/0:12,0:12:33.09:0,33,387	0/0:32,0:32:78.22:0,78,923	0/0:9,0:9:21.06:0,21,254	0/0:11,0:11:30.08:0,30,351	0/0:18,0:18:51.16:0,51,615	0/0:14,0:14:39.06:0,39,443	0/0:11,0:11:33.10:0,33,389	0/0:9,0:9:24.07:0,24,290	0/0:10,0:10:24.07:0,24,290	0/0:12,0:12:33.10:0,33,394	0/0:21,0:21:57.17:0,57,688	0/0:23,0:23:66.20:0,66,793	0/0:19,0:19:48.13:0,48,568	0/0:19,0:19:51.16:0,51,615	0/0:16,0:16:45.14:0,45,544	0/0:10,0:10:24.07:0,24,290	0/0:9,0:9:18.04:0,18,205	0/0:13,0:13:33.09:0,33,388	0/0:15,0:15:33.07:0,33,376	0/0:16,0:16:45.13:0,45,534	0/0:19,0:19:51.14:0,51,603	0/0:4,0:4:6.02:0,6,72
chr10	3069691	.	A	AACAC	2592.63	PASS	AC=16;AF=0.308;AN=52;BaseQRankSum=2.028;DP=654;FS=13.520;HRun=0;HaplotypeScore=137.0825;InbreedingCoeff=0.8554;MQ=66.91;MQ0=14;MQRankSum=-2.578;QD=12.00;ReadPosRankSum=-5.575;VQSLOD=0.6240;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:23,2:29:11.76:243,12,0	0/0:18,0:18:45.15:0,45,716	./.	0/0:25,0:13:2.55:0,3,47	0/0:21,0:23:48.15:0,48,723	0/0:20,0:22:2.11:0,2,469	0/0:21,0:23:45.10:0,45,626	1/1:22,0:34:41.39:270,41,0	0/0:23,0:26:38.98:0,39,533	0/0:24,0:24:36.07:0,36,549	0/0:20,0:20:16.10:0,16,415	0/0:26,0:26:56.98:0,57,870	0/0:18,0:18:33.11:0,33,523	0/0:16,0:16:27.07:0,27,404	1/1:32,0:34:5.94:101,6,0	0/0:22,0:22:0.11:0,0,288	1/1:21,0:23:15.05:253,15,0	1/1:20,0:20:18.04:285,18,0	0/0:21,0:19:21.05:0,21,290	0/0:22,0:23:20.54:0,21,463	0/0:18,0:18:42.11:0,42,586	0/0:22,0:24:17.56:0,18,398	0/0:13,0:13:21.07:0,21,334	0/0:30,0:31:66.14:0,66,1006	1/1:24,0:24:15.02:224,15,0	1/1:13,14:26:22.18:891,22,0	1/1:6,10:21:23.82:514,24,0	./.
chr10	3069796	.	AACTAGCCAACCAAAGC	A	4391.13	PASS	AB=0.578;AC=3;AF=0.056;AN=54;BaseQRankSum=9.185;DP=683;FS=4.378;HRun=0;HaplotypeScore=289.4527;InbreedingCoeff=0.6451;MQ=94.12;MQ0=1;MQRankSum=-8.163;QD=93.43;ReadPosRankSum=3.649;VQSLOD=4.3119;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,114,7634	0/0:7,0:7:21.07:0,21,1658	0/0:31,0:31:81.28:0,81,5267	0/0:33,0:33:93.11:0,93,5402	0/0:18,0:18:54.19:0,54,4062	0/0:23,0:23:66.23:0,66,4627	0/0:31,0:31:90.31:0,90,6359	0/0:21,0:21:57.19:0,57,3271	0/0:20,0:20:57.20:0,57,4337	0/0:15,0:15:42.14:0,42,3105	0/0:23,0:23:69.24:0,69,5144	0/0:25,0:25:72.25:0,72,5227	0/0:24,0:24:69.24:0,69,5271	0/0:29,0:29:87.30:0,87,6411	0/0:30,0:30:90.31:0,90,6710	0/0:25,0:25:75.26:0,75,5519	0/0:38,0:38:99:0,108,7925	0/0:26,0:26:75.26:0,75,5533	0/0:28,0:28:78.27:0,78,5291	0/0:16,0:16:48.16:0,48,3677	0/0:44,0:43:99:0,126,9207	0/0:21,0:21:63.22:0,63,4852	0/0:19,0:19:57.18:0,57,3686	0/0:26,0:26:72.22:0,72,5090	0/0:20,0:20:57.18:0,57,4199	0/1:7,19:26:99:2420,0,648	1/1:6,15:21:42.14:1971,42,0	./.
chr10	3073438	.	GA	G	594.87	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.063;DP=640;FS=6.174;HRun=8;HaplotypeScore=84.6425;InbreedingCoeff=0.9920;MQ=80.66;MQ0=1;MQRankSum=-0.603;QD=19.19;ReadPosRankSum=-4.495;VQSLOD=2.1265;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:44.56:0,45,309	0/0:10,0:10:24.04:0,24,265	0/0:23,0:20:44.55:0,45,413	0/0:41,0:30:25.17:0,25,363	0/0:15,0:15:45.14:0,45,543	0/0:36,0:36:99:0,102,1230	0/0:25,0:25:69.08:0,69,792	1/1:6,25:31:74.96:690,75,0	0/0:20,0:20:57.16:0,57,674	0/0:23,0:23:60.07:0,60,696	0/0:16,0:16:39.12:0,39,471	0/0:29,0:29:66.12:0,66,751	0/0:20,0:20:54.09:0,54,606	0/0:23,0:23:54.14:0,54,625	0/0:28,0:28:81.09:0,81,931	0/0:24,0:24:66.09:0,66,747	0/0:22,0:22:60.15:0,60,698	0/0:16,0:16:42.07:0,42,479	0/0:29,0:29:75.23:0,75,903	0/0:25,0:25:63.18:0,63,749	0/0:17,0:17:45.13:0,45,532	0/0:25,0:26:75.08:0,75,873	0/0:22,0:22:63.18:0,63,747	0/0:12,0:12:33.10:0,33,396	0/0:29,0:29:72.21:0,72,857	0/0:21,0:21:57.16:0,57,669	0/0:31,0:31:81.23:0,81,955	0/0:8,0:8:21.06:0,21,254
chr10	3074296	.	AAAATGCTAGAATCTTT	A	3496.90	PASS	AC=6;AF=0.111;AN=54;BaseQRankSum=8.213;DP=639;FS=0.727;HRun=0;HaplotypeScore=285.9200;InbreedingCoeff=0.9574;MQ=77.33;MQ0=0;MQRankSum=-6.943;QD=50.68;ReadPosRankSum=1.199;VQSLOD=2.8183;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:72.25:0,72,5246	0/0:9,0:9:24.08:0,24,1837	0/0:20,0:20:39.11:0,39,1773	0/0:9,0:9:18.04:0,18,424	0/0:38,0:38:93.32:0,93,6536	0/0:23,0:23:54.19:0,54,3818	0/0:22,0:22:45.15:0,45,2930	1/1:18,2:20:6.01:160,6,0	0/0:26,0:26:63.22:0,63,4363	0/0:33,0:33:69.24:0,69,4927	0/0:16,0:16:39.13:0,39,2789	0/0:19,0:19:51.17:0,51,3358	0/0:26,0:26:66.22:0,66,4379	0/0:30,0:30:72.24:0,72,4920	0/0:32,0:32:81.26:0,81,5547	0/0:24,0:24:60.20:0,60,4090	0/0:20,0:20:45.11:0,45,1640	0/0:16,0:16:39.13:0,39,2610	0/0:24,0:24:51.16:0,51,2786	0/0:36,0:36:96.31:0,96,6557	0/0:19,0:19:57.20:0,57,4139	0/0:32,0:32:81.26:0,81,5676	0/0:25,0:25:63.20:0,63,4426	0/0:21,0:21:57.20:0,57,4369	0/0:20,0:20:54.19:0,54,3953	1/1:12,16:28:48.15:1996,48,0	1/1:6,15:21:29.97:1341,30,0	./.
chr10	3074302	.	C	CA	305.61	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.095;DP=624;FS=0.999;HRun=0;HaplotypeScore=93.1759;InbreedingCoeff=0.8471;MQ=77.09;MQ0=0;MQRankSum=-6.441;QD=17.98;ReadPosRankSum=-0.030;VQSLOD=5.2735;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:81.27:0,81,1129	0/0:9,0:9:27.09:0,27,378	0/0:21,0:21:63.19:0,63,838	0/0:7,0:7:21.06:0,21,279	0/0:36,0:36:99:0,108,1510	0/0:20,0:20:60.20:0,60,839	0/0:22,0:22:66.22:0,66,922	0/0:15,0:15:41.81:0,42,555	0/0:24,0:24:72.24:0,72,1006	0/0:29,0:29:87.29:0,87,1205	0/0:15,0:15:45.15:0,45,629	0/0:22,0:22:66.21:0,66,905	0/0:25,0:25:75.25:0,75,1049	0/0:30,0:30:87.29:0,87,1215	0/0:31,0:31:93.30:0,93,1284	0/0:26,0:26:78.23:0,78,1057	1/1:0,17:17:45.01:400,45,0	0/0:16,0:16:48.16:0,48,671	0/0:26,0:26:75.25:0,75,1049	0/0:39,0:39:99:0,117,1636	0/0:21,0:21:63.19:0,63,863	0/0:29,0:29:87.29:0,87,1216	0/0:26,0:26:72.23:0,72,990	0/0:24,0:24:69.19:0,69,940	0/0:21,0:21:63.21:0,63,881	0/0:26,0:26:70.46:0,70,598	0/0:18,0:18:38.82:0,39,271	0/0:1,0:1:3.01:0,3,42
chr10	3074303	.	TAGA	T	683.16	PASS	AB=1.000;AC=4;AF=0.071;AN=56;BaseQRankSum=10.558;DP=625;FS=0.000;HRun=0;HaplotypeScore=116.3969;InbreedingCoeff=0.4146;MQ=77.69;MQ0=0;MQRankSum=-10.419;QD=11.39;ReadPosRankSum=2.404;VQSLOD=3.2494;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:84.29:0,84,1976	0/0:9,0:9:27.09:0,27,639	0/0:21,0:21:63.21:0,63,1370	0/0:8,0:8:24.08:0,24,528	0/0:36,0:36:99:0,108,2508	0/0:20,0:20:60.21:0,60,1395	0/0:22,0:22:66.21:0,66,1516	0/0:15,0:15:20.92:0,21,748	0/0:24,0:24:69.24:0,69,1624	0/0:28,0:28:84.29:0,84,1987	0/0:16,0:16:48.16:0,48,1116	0/0:22,0:22:66.23:0,66,1560	0/0:25,0:25:75.26:0,75,1772	0/0:30,0:30:87.30:0,87,2056	0/0:32,0:32:96.33:0,96,2271	0/0:26,0:26:78.25:0,78,1799	1/1:0,17:17:45.11:476,45,0	0/0:16,0:16:48.12:0,48,1078	0/0:26,0:26:78.26:0,78,1802	0/0:39,0:39:99:0,117,2739	0/0:22,0:22:66.23:0,66,1559	0/0:29,0:29:87.30:0,87,2057	0/0:25,0:25:72.25:0,72,1701	0/0:24,0:24:66.23:0,66,1559	0/0:21,0:21:63.22:0,63,1451	0/1:25,0:25:99:183,0,620	0/1:18,0:18:99:140,0,170	0/0:1,0:1:3.01:0,3,39
chr10	3074325	.	CTTT	C	691.34	PASS	AB=1.000;AC=4;AF=0.071;AN=56;BaseQRankSum=9.940;DP=666;FS=0.000;HRun=3;HaplotypeScore=118.0639;InbreedingCoeff=0.4569;MQ=84.10;MQ0=0;MQRankSum=-10.048;QD=10.47;ReadPosRankSum=3.102;VQSLOD=0.1715;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:84.27:0,84,2015	0/0:10,0:10:30.10:0,30,740	0/0:28,0:28:81.28:0,81,1899	0/0:13,0:13:39.12:0,39,851	0/0:30,0:30:90.31:0,90,2199	0/0:16,0:16:48.16:0,48,1183	0/0:19,0:19:57.17:0,57,1330	0/0:16,0:16:33.45:0,33,1024	0/0:25,0:25:75.26:0,75,1846	0/0:30,0:30:90.31:0,90,2202	0/0:19,0:19:57.20:0,57,1404	0/0:21,0:21:63.22:0,63,1534	0/0:23,0:23:69.22:0,69,1605	0/0:26,0:26:78.27:0,78,1900	0/0:34,0:34:99:0,102,2437	0/0:30,0:30:90.31:0,90,2195	1/1:0,19:19:36.12:649,36,0	0/0:18,0:18:51.14:0,51,1204	0/0:23,0:23:69.20:0,69,1602	0/0:41,0:41:99:0,123,2986	0/0:33,0:33:99:0,99,2423	0/0:36,0:36:99:0,108,2541	0/0:24,0:24:72.25:0,72,1771	0/0:31,0:31:90.31:0,90,2218	0/0:20,0:20:60.21:0,60,1477	0/1:20,0:20:99:107,0,248	0/1:27,0:27:51.09:51,0,774	0/0:6,0:6:15.05:0,15,350
chr10	3074475	.	T	TC	3873	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=6.307;DP=732;FS=2.306;HRun=6;HaplotypeScore=86.9430;InbreedingCoeff=0.9997;MQ=91.96;MQ0=0;MQRankSum=-1.403;QD=31.49;ReadPosRankSum=-0.122;VQSLOD=3.7234;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,120,1224	0/0:14,0:14:39.09:0,39,398	0/0:33,0:33:82.53:0,83,783	0/0:32,0:32:67.56:0,68,629	0/0:26,0:26:66.13:0,66,665	0/0:19,0:19:51.10:0,51,514	0/0:27,0:27:72.13:0,72,720	1/1:2,23:25:69.21:854,69,0	0/0:23,0:23:60.09:0,60,596	0/0:27,0:27:72.15:0,72,729	0/0:20,0:20:57.13:0,57,581	0/0:29,0:29:75.16:0,75,763	0/0:39,0:39:99:0,105,1070	0/0:24,0:24:69.16:0,69,703	1/1:5,35:40:93.30:1169,93,0	0/0:31,0:31:87.15:0,87,867	1/1:2,19:21:54.17:679,54,0	1/1:0,15:15:42.13:528,42,0	0/0:22,0:22:57.12:0,57,581	0/0:24,0:24:69.14:0,69,698	0/0:23,0:23:63.14:0,63,642	0/0:31,0:31:78.12:0,78,781	0/0:26,0:26:75.17:0,75,764	0/0:26,0:26:75.17:0,75,764	1/1:0,22:22:51.16:642,51,0	0/0:33,0:33:84.18:0,84,857	0/0:24,0:23:63.14:0,63,642	0/0:9,0:9:27.06:0,27,275
chr10	3075829	.	A	AC	346.41	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-2.661;DP=639;FS=10.672;HRun=7;HaplotypeScore=78.6440;InbreedingCoeff=0.8803;MQ=79.39;MQ0=0;MQRankSum=0.368;QD=15.75;ReadPosRankSum=-4.136;VQSLOD=1.8358;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,123,1175	0/0:12,0:12:24.03:0,24,231	0/0:18,0:18:12.86:0,13,239	0/0:18,0:18:23.21:0,23,325	0/0:28,0:28:72.10:0,72,691	0/0:24,0:24:69.10:0,69,662	0/0:23,0:23:60.07:0,60,573	1/1:7,15:22:39.06:441,39,0	0/0:23,0:23:34.99:0,35,481	0/0:30,0:30:69.09:0,69,662	0/0:13,0:13:36.05:0,36,347	0/0:32,0:32:84.13:0,84,810	0/0:26,0:26:73.91:0,74,694	0/0:22,0:22:54.08:0,54,521	0/0:40,0:40:99:0,111,1071	0/0:25,0:25:63.09:0,63,608	0/0:16,0:16:42.07:0,42,405	0/0:17,0:17:39.05:0,39,376	0/0:16,0:16:42.03:0,42,391	0/0:24,0:24:54.05:0,54,509	0/0:34,0:34:87.08:0,87,822	0/0:26,0:26:69.09:0,69,660	0/0:16,0:16:45.04:0,45,426	0/0:29,0:29:69.10:0,69,666	0/0:22,0:22:60.07:0,60,570	0/0:14,0:14:39.05:0,39,371	0/0:19,0:19:48.07:0,48,463	0/0:3,0:3:6.01:0,6,58
chr10	3076471	.	TATACACACACACACAC	T	1435.56	PASS	AB=0.636;AC=5;AF=0.089;AN=56;BaseQRankSum=7.277;DP=480;FS=0.000;HRun=0;HaplotypeScore=192.5638;InbreedingCoeff=0.6345;MQ=79.90;MQ0=7;MQRankSum=0.403;QD=33.39;ReadPosRankSum=1.365;VQSLOD=2.5337;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:56.98:0,57,1194	0/0:9,0:8:12.01:0,12,458	0/0:24,0:16:48.02:0,48,486	0/0:34,0:32:80.84:0,81,833	0/0:11,0:11:27.04:0,27,1421	0/0:22,0:22:60.11:0,60,3136	0/0:12,0:12:27.07:0,27,1465	0/0:29,0:29:57.18:0,57,1090	0/0:12,0:13:28.55:0,29,685	0/0:14,0:14:42.08:0,42,1205	0/0:16,0:16:42.03:0,42,1283	0/0:18,0:18:48.03:0,48,1477	0/0:11,0:11:33.05:0,33,1592	0/0:15,0:15:38.92:0,39,894	0/0:14,0:14:33:0,33,606	0/0:14,0:13:39.05:0,39,1616	0/0:24,0:23:51.63:0,52,541	0/0:16,0:16:41.72:0,42,647	0/0:14,0:14:40.54:0,41,1280	0/0:13,0:13:30:0,30,1232	0/0:21,0:20:54.06:0,54,1712	0/0:14,0:14:30.04:0,30,1105	0/0:13,0:13:33.03:0,33,1512	0/0:28,0:28:63.08:0,63,2655	0/0:8,0:8:6.01:0,6,126	1/1:1,17:19:2.68:643,3,0	1/1:2,13:16:18.06:835,18,0	0/1:3,0:7:73.50:73,0,98
chr10	3076473	.	T	TAC	294.17	PASS	AB=0.969;AC=14;AF=0.280;AN=50;BaseQRankSum=-1.713;DP=500;FS=11.471;HRun=0;HaplotypeScore=89.4942;InbreedingCoeff=0.1229;MQ=74.52;MQ0=8;MQRankSum=0.701;QD=1.59;ReadPosRankSum=-0.542;VQSLOD=0.7965;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:32:5.55:0,6,27	1/1:7,5:11:3.01:44,3,0	./.	./.	0/1:11,0:11:13.90:14,0,46	0/0:22,0:25:14.86:0,15,141	0/1:14,0:14:27.35:27,0,93	0/1:25,0:29:0:0,0,0	0/1:15,0:15:20.20:51,0,20	0/0:14,0:14:9.02:0,9,95	0/0:16,0:16:5.85:0,6,46	0/0:18,0:18:5.93:0,6,49	0/0:11,0:11:12.02:0,12,119	1/1:15,0:15:2.21:7,2,0	0/0:10,0:14:8.52:0,9,42	0/0:14,0:15:14.87:0,15,141	0/0:24,0:23:0:0,0,0	./.	1/1:16,0:16:9:93,9,0	0/1:14,0:14:14.96:15,0,38	0/0:25,0:24:9.08:0,9,70	0/1:15,0:15:0:0,0,0	0/1:14,0:14:21.29:69,0,21	0/1:20,8:30:36.50:105,0,37	0/0:3,0:9:2.84:0,3,14	0/0:19,0:19:8.52:0,9,42	0/0:16,0:15:16.96:0,17,82	0/0:7,0:7:1.82:0,2,5
chr10	3077045	.	T	TAC	1769.17	PASS	AB=0.809;AC=14;AF=0.259;AN=54;BaseQRankSum=-2.096;DP=703;FS=9.270;HRun=0;HaplotypeScore=118.0235;InbreedingCoeff=0.1888;MQ=59.59;MQ0=18;MQRankSum=1.345;QD=7.13;ReadPosRankSum=-2.932;VQSLOD=2.2028;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:20,12:32:54.82:318,0,55	0/0:12,0:12:23.58:0,24,209	0/0:37,0:11:3.01:0,3,33	./.	0/0:30,0:30:39.04:0,39,370	0/0:30,0:33:53.96:0,54,572	0/0:32,0:32:47.60:0,48,482	1/1:21,0:21:5.07:42,5,0	0/0:25,0:32:65.37:0,65,631	0/0:19,0:22:35.76:0,36,361	0/1:19,0:21:0.16:0,0,290	0/1:17,1:19:15.47:15,0,248	0/0:18,0:21:35.58:0,36,359	0/0:17,0:19:32.74:0,33,321	1/1:11,1:25:23.90:209,24,0	0/0:18,0:21:26.57:0,27,242	0/0:30,0:28:43.20:0,43,494	0/1:9,0:20:2.66:112,0,3	0/1:14,2:16:24.51:164,0,25	0/1:18,10:29:22.37:309,0,22	0/0:35,0:36:44.47:0,44,409	0/0:17,0:17:32.32:0,32,287	0/1:13,2:16:84.41:208,0,84	0/1:13,15:28:36.21:499,0,36	1/1:8,2:19:2.68:45,3,0	0/0:29,0:28:45.62:0,46,277	0/0:17,0:18:32.01:0,32,195	0/0:4,0:4:2.98:0,3,21
chr10	3077075	.	CACACAA	C	1946.92	PASS	AB=1.000;AC=5;AF=0.093;AN=54;BaseQRankSum=6.491;DP=743;FS=13.345;HRun=0;HaplotypeScore=164.0707;InbreedingCoeff=0.7735;MQ=55.24;MQ0=13;MQRankSum=-6.828;QD=21.16;ReadPosRankSum=-3.390;VQSLOD=2.1220;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:33:60.02:0,60,1273	0/0:12,0:12:27.14:0,27,759	0/0:25,0:12:30:0,30,315	0/0:34,0:11:16.98:0,17,218	0/0:27,0:27:65.62:0,66,1489	0/0:40,0:39:96.78:0,97,2303	0/0:35,0:35:92.83:0,93,1562	0/1:34,0:34:92.11:92,0,393	0/0:30,0:30:69.77:0,70,1850	0/0:28,0:28:74.96:0,75,1420	0/0:23,0:22:25.33:0,25,1131	0/0:29,0:29:75.99:0,76,1553	0/0:21,0:21:58.04:0,58,1381	0/0:19,0:19:50.53:0,51,1205	0/0:25,0:25:43.83:0,44,815	0/0:20,0:20:57.10:0,57,1132	0/0:33,0:31:49.55:0,50,1828	0/0:22,0:21:23.99:0,24,384	0/0:22,0:22:52.80:0,53,776	0/0:29,0:29:23.79:0,24,1100	0/0:34,0:32:75.48:0,75,1431	0/0:25,0:24:55.50:0,55,1214	0/0:20,0:20:45.19:0,45,965	0/0:34,0:33:72.08:0,72,1584	0/0:27,0:27:43.72:0,44,492	1/1:31,9:38:97.61:1338,98,0	1/1:12,6:18:39.48:645,39,0	./.
chr10	3080593	.	T	TTG	394.23	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-3.089;DP=595;FS=11.188;HRun=0;HaplotypeScore=76.4949;InbreedingCoeff=0.9562;MQ=61.68;MQ0=5;MQRankSum=2.358;QD=16.43;ReadPosRankSum=4.601;VQSLOD=2.9327;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:31.87:0,32,211	0/0:12,0:12:31.84:0,32,286	0/0:44,0:9:16.82:0,17,130	0/0:25,0:12:14.70:0,15,110	0/0:22,0:22:62.99:0,63,613	0/0:21,0:21:56.15:0,56,495	0/0:27,0:27:78.02:0,78,723	0/0:33,0:33:78.21:0,78,549	0/0:18,0:18:53.84:0,54,459	0/0:23,0:23:68.13:0,68,593	0/0:18,0:18:50.61:0,51,430	0/0:28,0:28:78.36:0,78,658	0/0:20,0:20:54:0,54,472	0/0:18,0:18:50.59:0,51,461	0/0:28,0:28:71.72:0,72,572	0/0:26,0:26:62.99:0,63,588	1/1:0,18:24:35.72:489,36,0	0/0:18,0:18:44.90:0,45,367	0/0:20,0:18:52.55:0,53,483	0/0:15,0:15:34.87:0,35,281	0/0:11,0:11:30.02:0,30,280	0/0:18,0:18:53.93:0,54,470	0/0:21,0:21:53.10:0,53,461	0/0:21,0:21:32.19:0,32,248	0/0:17,0:17:43.96:0,44,354	0/0:16,0:16:47.85:0,48,392	0/0:25,0:25:62.69:0,63,487	0/0:5,0:5:14.92:0,15,117
chr10	3081072	.	GC	G	1076.02	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.027;DP=651;FS=7.501;HRun=1;HaplotypeScore=62.1707;InbreedingCoeff=0.9874;MQ=82.45;MQ0=0;MQRankSum=-1.387;QD=32.61;ReadPosRankSum=2.393;VQSLOD=2.8753;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,105,1605	0/0:9,0:9:27.05:0,27,404	0/0:20,0:20:60.14:0,60,885	0/0:17,0:17:44.63:0,45,656	0/0:14,0:14:42.12:0,42,633	0/0:24,0:23:72.25:0,72,1146	0/0:29,0:29:87.26:0,87,1341	0/0:35,0:35:99:0,102,1569	0/0:38,0:38:99:0,114,1793	0/0:22,0:22:66.19:0,66,1024	0/0:11,0:11:27.09:0,27,432	0/0:33,0:33:99:0,99,1559	0/0:20,0:20:60.20:0,60,958	0/0:26,0:26:78.27:0,78,1232	0/0:30,0:30:90.31:0,90,1436	0/0:28,0:28:84.29:0,84,1332	1/1:0,33:33:84.28:1171,84,0	0/0:19,0:19:57.19:0,57,911	0/0:25,0:25:75.26:0,75,1198	0/0:12,0:12:36.12:0,36,571	0/0:52,0:52:99:0,157,2460	0/0:8,0:8:24.08:0,24,384	0/0:10,0:10:30.09:0,30,450	0/0:25,0:25:75.26:0,75,1199	0/0:16,0:16:48.16:0,48,764	0/0:28,0:28:84.29:0,84,1342	0/0:24,0:24:72.25:0,72,1144	0/0:6,0:6:18.06:0,18,288
chr10	3081325	.	G	GTAGA	1696.02	PASS	AB=1.000;AC=13;AF=0.283;AN=46;BaseQRankSum=-0.228;DP=565;FS=0.000;HRun=0;HaplotypeScore=102.8936;InbreedingCoeff=0.1843;MQ=68.11;MQ0=23;MQRankSum=-2.234;QD=8.44;ReadPosRankSum=-0.461;VQSLOD=2.6329;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:19:3.85:0,4,22	0/1:9,0:9:59.88:60,0,120	./.	./.	0/1:10,0:19:0:0,0,1	0/1:30,0:30:23.30:285,0,23	1/1:13,0:12:0.47:1,0,0	./.	0/0:20,0:20:39.10:0,39,532	0/0:22,0:22:21.07:0,21,311	0/0:16,0:15:6.02:0,6,89	0/0:24,6:29:27.07:0,27,367	0/0:16,0:16:12.04:0,12,176	./.	0/0:26,0:23:30.07:0,30,406	0/0:23,0:23:27.08:0,27,378	0/0:16,0:16:2.68:0,3,11	0/1:17,0:22:21.03:21,0,23	1/1:19,0:17:12.04:187,12,0	0/1:13,0:11:13.88:125,0,14	0/0:15,0:14:21.06:0,21,273	0/0:17,0:17:18:0,18,207	0/0:13,0:12:18.04:0,18,249	./.	0/0:31,0:31:2.96:0,3,19	0/1:32,0:30:12.21:417,0,12	1/1:37,0:36:55.53:728,56,0	0/1:7,0:7:8.47:8,0,13
chr10	3081366	.	TAGATAGATAGGCAGGC	T	839.37	PASS	AB=0.900;AC=5;AF=0.089;AN=56;BaseQRankSum=6.559;DP=507;FS=4.458;HRun=0;HaplotypeScore=192.2680;InbreedingCoeff=-0.0941;MQ=51.09;MQ0=22;MQRankSum=-5.240;QD=7.56;ReadPosRankSum=2.504;VQSLOD=2.2422;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:20:6.22:6,0,78	0/0:8,0:8:21.07:0,21,1014	0/0:1,0:1:3.01:0,3,81	0/0:2,0:2:6.02:0,6,206	0/0:16,0:16:23.97:0,24,540	0/0:15,0:15:32.22:0,32,1188	0/0:21,0:19:32.83:0,33,595	0/0:19,0:18:23.95:0,24,371	0/0:25,0:25:72.20:0,72,3076	0/0:19,0:19:43.13:0,43,1447	0/0:18,0:16:24.95:0,25,715	0/0:32,0:31:65.41:0,65,1991	0/0:20,0:19:47.87:0,48,1724	0/0:25,0:24:18.79:0,19,573	0/0:25,0:22:39.92:0,40,322	0/0:19,0:19:46.49:0,46,1830	0/1:3,17:20:13.81:125,0,14	0/0:16,0:16:15.27:0,15,299	0/0:11,0:9:21.03:0,21,640	0/0:9,0:7:18.06:0,18,629	0/0:22,0:21:46.56:0,47,1035	0/0:9,0:9:27.09:0,27,801	0/0:14,0:11:25.41:0,25,1187	0/0:25,0:25:36.70:0,37,1245	0/0:25,0:24:10.39:0,10,162	0/1:31,0:28:99:221,0,1344	0/1:32,0:31:99:556,0,1720	0/1:4,0:3:44.98:45,0,74
chr10	3081370	.	TAGATAGGC	T	2056.57	PASS	AB=0.952;AC=13;AF=0.232;AN=56;BaseQRankSum=1.004;DP=492;FS=1.117;HRun=0;HaplotypeScore=124.2490;InbreedingCoeff=0.1579;MQ=50.90;MQ0=23;MQRankSum=-0.877;QD=9.66;ReadPosRankSum=2.125;VQSLOD=2.2967;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:11,0:18:27.56:28,0,31	0/0:9,0:9:21.07:0,21,511	0/0:1,0:1:3.01:0,3,40	0/0:3,0:2:6.02:0,6,99	0/1:16,0:16:69.81:70,0,176	0/0:15,0:15:32.29:0,32,555	0/0:22,0:20:25.61:0,26,293	0/0:16,0:15:12.04:0,12,171	0/0:25,0:25:69.24:0,69,1501	0/0:18,0:18:33.56:0,34,653	0/0:14,0:12:21.53:0,22,322	0/0:28,0:27:13.37:0,13,861	0/0:18,0:17:48.13:0,48,809	0/0:26,0:25:18.53:0,19,303	1/1:26,0:23:56.96:902,57,0	0/0:17,0:17:43.09:0,43,914	1/1:20,0:20:3:47,3,0	0/1:16,0:16:33.13:412,0,33	0/0:12,0:9:16.24:0,16,237	0/0:9,0:7:18.06:0,18,286	0/1:23,0:22:99:260,0,432	0/0:9,0:9:27.08:0,27,393	0/0:13,0:10:21.96:0,22,635	0/0:24,0:24:30.12:0,30,545	1/1:4,19:22:2.34:69,2,0	0/1:30,0:27:92.92:93,0,543	0/1:33,0:32:99:272,0,741	0/1:4,0:3:26.65:60,0,27
chr10	3081374	.	TAGGCAGGCAGGC	T	1698.97	PASS	AB=0.829;AC=7;AF=0.125;AN=56;BaseQRankSum=4.426;DP=497;FS=0.000;HRun=0;HaplotypeScore=158.0416;InbreedingCoeff=0.4119;MQ=52.42;MQ0=22;MQRankSum=-4.378;QD=16.18;ReadPosRankSum=3.119;VQSLOD=1.9168;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:20,0:18:22.31:22,0,51	0/0:8,0:8:18.01:0,18,710	0/0:2,0:2:6.02:0,6,300	0/0:5,0:4:11.91:0,12,508	0/0:14,0:14:12.04:0,12,530	0/0:16,0:16:32.21:0,32,1265	0/0:23,0:21:34.69:0,35,1059	0/0:15,0:14:24.04:0,24,825	0/0:27,0:27:69.19:0,69,3056	0/0:16,0:16:18.06:0,18,695	0/0:13,0:11:9.79:0,10,458	0/0:28,0:27:41.20:0,41,1650	0/0:18,0:17:38.94:0,39,1885	0/0:26,0:25:22.63:0,23,1059	0/0:31,0:28:55.68:0,56,986	0/0:19,0:19:35.13:0,35,1569	1/1:18,0:18:3.01:49,3,0	0/0:17,0:17:36.11:0,36,672	0/0:11,0:9:12.01:0,12,372	0/0:11,0:8:12.47:0,12,445	0/0:23,0:22:38.72:0,39,1622	0/0:9,0:9:9.03:0,9,413	0/0:14,0:11:16.41:0,16,844	0/0:24,0:24:34.65:0,35,1728	0/0:22,0:21:5.45:0,5,43	0/1:21,8:26:19.78:591,0,20	0/1:22,11:32:0.57:1024,0,1	1/1:4,0:3:6.02:137,6,0
chr10	3081376	.	GGC	G	122.02	PASS	AB=0.904;AC=5;AF=0.089;AN=56;BaseQRankSum=6.760;DP=489;FS=4.253;HRun=0;HaplotypeScore=90.9151;InbreedingCoeff=0.1997;MQ=52.63;MQ0=21;MQRankSum=-0.833;QD=1.53;ReadPosRankSum=1.356;VQSLOD=1.6849;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:16:12.97:0,13,138	0/0:8,0:8:23.44:0,23,360	0/0:3,0:2:6.02:0,6,117	0/0:7,0:6:14.79:0,15,242	0/0:14,0:14:12.04:0,12,238	0/0:17,0:17:42.21:0,42,613	0/0:20,0:18:26.81:0,27,421	0/0:17,0:16:39.13:0,39,661	0/0:27,0:27:81.26:0,81,1438	0/0:16,0:16:42.14:0,42,669	0/0:12,0:10:15.34:0,15,272	0/0:28,0:27:58.09:0,58,972	0/0:18,0:17:48.16:0,48,908	0/0:26,0:25:21.54:0,22,426	0/0:31,0:28:21.65:0,22,377	0/0:17,0:17:46.10:0,46,815	1/1:18,0:18:2.04:6,2,0	0/0:16,0:16:13.06:0,13,166	0/0:11,0:9:24.64:0,25,300	0/0:11,0:8:19.61:0,20,244	0/0:23,0:22:55.59:0,56,933	0/0:9,0:9:27.08:0,27,428	0/0:14,0:11:21.54:0,22,394	0/0:23,0:23:33.55:0,34,671	0/0:22,0:21:1.41:0,1,2	0/1:27,0:25:11.76:12,0,314	0/1:28,3:30:49.51:170,0,50	0/1:3,1:3:34.65:36,0,35
chr10	3081379	.	AGGCAGG	A	533.99	PASS	AB=0.901;AC=5;AF=0.089;AN=56;BaseQRankSum=6.895;DP=483;FS=3.080;HRun=0;HaplotypeScore=115.1992;InbreedingCoeff=0.1823;MQ=52.43;MQ0=21;MQRankSum=-4.072;QD=7.22;ReadPosRankSum=3.383;VQSLOD=1.6513;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:16:16.91:0,17,130	0/0:7,0:7:21.05:0,21,549	0/0:5,0:2:6.02:0,6,213	0/0:10,0:9:27.09:0,27,688	0/0:13,0:13:12.04:0,12,416	0/0:19,0:19:52.96:0,53,1282	0/0:20,0:18:33.80:0,34,791	0/0:16,0:15:36.12:0,36,903	0/0:28,0:28:84.29:0,84,2401	0/0:15,0:15:45.15:0,45,879	0/0:13,0:10:15.37:0,15,412	0/0:27,0:26:60:0,60,1588	0/0:18,0:18:51.15:0,51,1508	0/0:26,0:25:26.11:0,26,824	0/0:31,0:28:74.24:0,74,739	0/0:17,0:17:47.18:0,47,1282	1/1:18,0:18:3.01:32,3,0	0/0:16,0:16:35.40:0,35,381	0/0:11,0:9:26.91:0,27,489	0/0:10,0:7:18.02:0,18,396	0/0:22,0:21:51.65:0,52,1415	0/0:7,0:7:21.07:0,21,491	0/0:14,0:11:18.95:0,19,614	0/0:23,0:23:34.86:0,35,1205	0/0:22,0:21:4.94:0,5,15	0/1:24,0:22:99:157,0,409	0/1:25,3:27:99:380,0,234	0/1:3,1:3:35.01:77,0,35
chr10	3083750	.	CT	C	3839.88	PASS	AB=1.000;AC=20;AF=0.357;AN=56;BaseQRankSum=14.711;DP=426;FS=12.584;HRun=9;HaplotypeScore=64.8102;InbreedingCoeff=0.8246;MQ=74.71;MQ0=0;MQRankSum=-2.002;QD=19.20;ReadPosRankSum=0.390;VQSLOD=3.1205;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,20:23:60.03:547,60,0	0/0:10,0:10:24.07:0,24,277	0/0:16,0:11:23.37:0,23,207	0/1:15,0:11:19.06:23,0,19	0/0:35,0:35:96.05:0,96,1079	0/0:15,0:14:36.11:0,36,415	0/1:6,0:6:9.17:9,0,155	1/1:4,22:26:56.68:503,57,0	0/0:6,0:6:15.04:0,15,173	0/0:24,0:24:63.19:0,63,727	0/0:23,0:23:63.17:0,63,716	0/0:12,0:12:30.09:0,30,346	0/0:15,0:15:42.12:0,42,485	0/0:10,0:10:24.07:0,24,277	1/1:1,0:11:28.55:172,29,0	0/0:8,0:8:15.04:0,15,173	1/1:1,26:27:69.03:631,69,0	1/1:1,0:16:43.95:321,44,0	0/0:13,0:13:33.09:0,33,373	0/0:8,0:8:21.06:0,21,242	0/0:4,0:4:9.03:0,9,104	0/0:7,0:7:12.03:0,12,138	0/0:16,0:16:12.11:0,12,356	0/0:4,0:4:12.04:0,12,138	1/1:1,0:28:68.43:457,68,0	1/1:1,18:19:21.99:436,22,0	1/1:2,21:23:63.03:576,63,0	1/1:0,6:6:18.01:165,18,0
chr10	3084296	.	A	ACACG	1240.25	PASS	AB=1.000;AC=10;AF=0.179;AN=56;BaseQRankSum=1.775;DP=766;FS=20.078;HRun=0;HaplotypeScore=137.4433;InbreedingCoeff=0.4089;MQ=63.35;MQ0=21;MQRankSum=1.846;QD=7.01;ReadPosRankSum=-2.211;VQSLOD=1.2662;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:38,0:38:99:133,0,352	0/0:9,0:9:24.05:0,24,347	0/0:72,0:23:52.07:0,52,525	0/0:65,0:23:56.71:0,57,628	0/0:15,0:15:36.35:0,36,387	0/0:18,0:18:1.93:0,2,438	0/0:36,0:36:98.87:0,99,1007	0/0:27,0:26:71.50:0,72,635	0/0:32,0:32:90.91:0,91,764	0/0:20,0:20:54.01:0,54,545	0/0:11,0:11:26.97:0,27,334	0/0:26,0:26:62.87:0,63,680	0/0:24,0:24:62:0,62,678	0/0:34,0:34:71.89:0,72,751	0/0:29,0:29:51.76:0,52,407	0/0:39,0:39:85.82:0,86,929	0/1:24,0:23:59.64:60,0,222	0/1:26,0:26:99:170,0,235	0/0:24,0:23:59.14:0,59,552	0/0:12,0:12:27.01:0,27,325	0/0:38,0:38:77.80:0,78,755	0/0:12,0:11:23.99:0,24,245	0/0:14,0:14:29.87:0,30,308	0/0:32,0:32:77.77:0,78,747	0/1:24,0:24:99:113,0,197	1/1:2,1:29:68.47:668,68,0	1/1:4,16:25:9.30:163,9,0	1/1:0,10:11:3.01:83,3,0
chr10	3086270	.	G	GC	2453.93	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=3.105;DP=706;FS=1.002;HRun=4;HaplotypeScore=89.0611;InbreedingCoeff=0.9627;MQ=75.19;MQ0=0;MQRankSum=-1.907;QD=32.29;ReadPosRankSum=1.645;VQSLOD=4.0770;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,105,1162	0/0:12,0:12:36.09:0,36,397	0/0:16,0:16:36.06:0,36,369	0/0:15,0:15:36:0,36,380	0/0:19,0:19:54.07:0,54,575	0/0:15,0:15:45.09:0,45,496	0/0:27,0:27:78.19:0,78,863	0/0:39,0:39:93.23:0,93,990	0/0:22,0:22:54.10:0,54,595	0/0:32,0:32:96.16:0,96,1057	0/0:22,0:22:57.16:0,57,646	0/0:24,0:24:66.18:0,66,740	0/0:43,0:43:99:0,123,1358	0/0:30,0:30:84.21:0,84,938	1/1:1,24:25:23.16:704,23,0	0/0:16,0:16:45.07:0,45,487	0/0:40,0:40:99:0,114,1263	1/1:1,26:27:72.20:964,72,0	0/0:28,0:28:84.18:0,84,922	0/0:26,0:26:72.08:0,72,767	0/0:44,0:44:99:0,114,1273	0/0:23,0:23:60.17:0,60,680	0/0:23,0:23:66.19:0,66,747	0/0:28,0:28:75.20:0,75,841	1/1:1,23:24:69.23:928,69,0	0/0:28,0:28:78.22:0,78,884	0/0:19,0:19:54.13:0,54,593	0/0:2,0:2:6.02:0,6,68
chr10	3086583	.	CAAGA	C	4397.85	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.413;DP=820;FS=4.891;HRun=0;HaplotypeScore=141.9247;InbreedingCoeff=0.9996;MQ=87.85;MQ0=1;MQRankSum=-4.209;QD=50.55;ReadPosRankSum=2.693;VQSLOD=5.7331;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,163,4551	0/0:16,0:16:48.13:0,48,1266	0/0:27,0:27:78.73:0,79,2071	0/0:30,0:30:77.11:0,77,2043	0/0:38,0:38:99:0,114,3053	0/0:25,0:25:75.25:0,75,2092	0/0:30,0:29:90.29:0,90,2464	0/0:33,0:33:99:0,99,2563	0/0:32,0:32:96.31:0,96,2664	0/0:34,0:34:99:0,99,2723	0/0:20,0:20:60.21:0,60,1685	0/0:26,0:26:78.25:0,78,2155	0/0:30,0:30:90.30:0,90,2523	0/0:30,0:30:90.31:0,90,2584	1/1:0,45:45:99:2106,102,0	0/0:37,0:37:99:0,111,3044	0/0:40,0:40:99:0,117,3301	1/1:0,17:17:46.88:991,47,0	0/0:21,0:21:63.18:0,63,1555	0/0:23,0:23:69.24:0,69,1968	0/0:46,0:46:99:0,135,3708	0/0:28,0:28:81.74:0,82,2239	0/0:37,0:37:99:0,111,3063	0/0:22,0:22:66.23:0,66,1871	1/1:0,25:24:63.22:1301,63,0	0/0:25,0:25:75.24:0,75,1988	0/0:20,0:20:60.20:0,60,1636	0/0:9,0:9:27.09:0,27,781
chr10	3086896	.	GA	G	677.61	PASS	AB=0.909;AC=5;AF=0.089;AN=56;BaseQRankSum=6.512;DP=674;FS=9.002;HRun=9;HaplotypeScore=67.0622;InbreedingCoeff=0.7865;MQ=72.21;MQ0=0;MQRankSum=1.288;QD=14.12;ReadPosRankSum=1.222;VQSLOD=3.0770;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,17:17:42.02:384,42,0	0/0:16,0:16:45.13:0,45,519	0/0:14,0:14:14.40:0,14,222	0/1:9,0:10:8.31:8,0,116	0/0:30,0:30:87.26:0,87,1004	0/0:34,0:34:81.19:0,81,900	0/0:23,0:23:66.17:0,66,743	0/0:29,0:29:78.21:0,78,881	0/0:25,1:26:38.74:0,39,700	0/0:29,0:29:72.20:0,72,811	0/0:24,0:24:69.20:0,69,796	0/0:39,1:40:80.84:0,81,1165	0/0:25,0:25:63.19:0,63,727	0/0:23,0:23:66.14:0,66,745	0/0:24,0:24:63.17:0,63,718	0/0:32,0:32:39.78:0,40,751	1/1:3,18:21:45.02:412,45,0	0/0:16,0:16:41.86:0,42,462	0/0:19,0:19:39.11:0,39,442	0/0:29,0:29:75.22:0,75,865	0/0:23,0:23:57.16:0,57,650	0/0:25,1:26:41.74:0,42,726	0/0:31,0:31:75.22:0,75,866	0/0:20,0:20:57.17:0,57,658	0/0:19,0:19:54.15:0,54,614	0/0:37,0:37:99:0,99,1120	0/0:32,0:32:87.25:0,87,994	0/0:5,0:5:12.04:0,12,138
chr10	3087425	.	A	AGATGAT	3737.84	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=4.956;DP=720;FS=1.563;HRun=0;HaplotypeScore=156.1319;InbreedingCoeff=0.7877;MQ=63.91;MQ0=9;MQRankSum=-5.540;QD=17.97;ReadPosRankSum=0.044;VQSLOD=2.8890;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:17,10:28:15.05:455,15,0	0/0:8,0:8:18.06:0,18,365	0/0:27,0:15:2.07:0,2,55	0/0:21,0:14:0.82:0,1,44	0/0:34,0:35:60.15:0,60,1055	0/0:20,0:20:36.11:0,36,695	0/1:25,0:25:18.08:18,0,551	0/0:26,0:26:11.39:0,11,131	0/0:25,0:25:42.13:0,42,815	0/0:35,0:35:48.16:0,48,953	0/0:24,0:24:36.11:0,36,649	0/0:27,0:27:45.13:0,45,841	0/0:22,0:22:33.10:0,33,598	0/0:28,0:29:48.14:0,48,872	1/1:16,18:35:33.11:1059,33,0	0/0:34,0:34:54.18:0,54,1096	0/0:33,0:33:63.18:0,63,1234	1/1:7,0:7:3.01:84,3,0	0/0:6,0:7:9.02:0,9,128	0/0:31,0:31:51.04:0,51,1034	0/0:22,0:22:51.12:0,51,952	0/0:32,0:32:75.25:0,75,1467	0/0:35,0:35:66.19:0,66,1238	0/0:16,0:19:33.11:0,33,650	1/1:10,19:31:36.12:1159,36,0	1/1:28,0:27:53.51:378,54,0	1/1:39,0:38:24.59:448,25,0	1/1:15,0:15:20.74:137,21,0
chr10	3087450	.	G	GATA	3776.77	PASS	AB=1.000;AC=10;AF=0.179;AN=56;BaseQRankSum=11.491;DP=706;FS=0.419;HRun=0;HaplotypeScore=110.4838;InbreedingCoeff=0.5141;MQ=59.22;MQ0=8;MQRankSum=-3.113;QD=20.75;ReadPosRankSum=4.835;VQSLOD=3.6158;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:24:97.25:97,0,108	0/0:9,0:9:27.05:0,27,380	0/0:22,0:13:21.62:0,22,275	0/0:17,0:12:32.28:0,32,270	0/0:35,0:35:99:0,102,1308	0/0:20,0:20:56.32:0,56,762	0/0:24,0:24:34.96:0,35,776	0/0:34,0:33:90.11:0,90,865	0/0:24,0:24:69.09:0,69,926	0/0:26,0:26:75.19:0,75,1064	0/0:22,0:22:63.09:0,63,822	0/0:19,0:19:54.14:0,54,825	0/0:19,0:19:57.06:0,57,744	0/0:27,0:27:77.33:0,77,1012	0/1:40,0:40:99:162,0,317	0/0:30,0:30:87.15:0,87,1190	0/0:30,0:31:81.02:0,81,1186	0/1:7,0:7:14.11:14,0,54	0/0:13,0:13:33:0,33,334	0/0:29,0:29:78.14:0,78,1089	0/0:25,0:25:75.11:0,75,1050	0/0:36,0:36:99:0,105,1504	0/0:41,0:41:99:0,105,1422	0/0:21,0:21:51.07:0,51,683	0/1:33,0:32:99:193,0,144	1/1:4,27:30:57.04:1385,57,0	1/1:1,32:33:63.69:1444,64,0	1/1:1,12:13:21.07:481,21,0
chr10	3087715	.	A	AGAAAGATG	831.33	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-1.924;DP=745;FS=1.279;HRun=0;HaplotypeScore=188.3527;InbreedingCoeff=0.9689;MQ=67.05;MQ0=1;MQRankSum=-3.867;QD=33.25;ReadPosRankSum=0.545;VQSLOD=3.5175;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,132,3199	0/0:14,0:14:36.07:0,36,668	0/0:26,0:20:20.59:0,21,544	0/0:16,0:13:17.60:0,18,301	0/0:28,0:28:60.19:0,60,1393	0/0:29,0:29:54.16:0,54,1267	0/0:21,0:21:54.17:0,54,1268	0/0:26,0:26:39.08:0,39,661	0/0:29,0:29:69.22:0,69,1716	0/0:31,0:31:78.27:0,78,1936	0/0:20,0:20:36.09:0,36,742	0/0:35,0:35:81.24:0,81,1948	0/0:39,0:39:96.25:0,96,2196	0/0:16,0:16:30.10:0,30,743	0/0:34,0:34:75.24:0,75,1842	0/0:31,0:31:69.24:0,69,1789	1/1:10,11:25:24.08:925,24,0	0/0:19,0:19:48.16:0,48,1218	0/0:22,0:22:42.14:0,42,974	0/0:22,0:22:57.20:0,57,1425	0/0:25,0:25:45.13:0,45,1059	0/0:27,0:27:66.21:0,66,1618	0/0:24,0:24:60.17:0,60,1453	0/0:38,0:38:93.30:0,93,2268	0/0:20,0:20:51.18:0,51,1212	0/0:30,0:29:75.18:0,75,1645	0/0:34,0:32:87.26:0,87,2041	0/0:8,0:8:15.05:0,15,363
chr10	3087920	.	T	TTGGA	3553.65	PASS	AB=0.660;AC=7;AF=0.130;AN=54;BaseQRankSum=2.315;DP=874;FS=0.534;HRun=0;HaplotypeScore=150.4434;InbreedingCoeff=0.6916;MQ=69.77;MQ0=7;MQRankSum=-0.135;QD=28.43;ReadPosRankSum=-0.592;VQSLOD=3.5512;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:17,18:37:30.10:707,30,0	0/0:12,0:12:27.09:0,27,420	0/0:32,0:24:5.98:0,6,63	0/0:29,0:19:6.02:0,6,89	0/0:33,0:32:78.25:0,78,1186	0/0:21,0:21:36.12:0,36,555	0/0:21,0:21:27.07:0,27,391	./.	0/0:42,0:42:54.14:0,54,831	0/0:30,0:30:42.13:0,42,615	0/0:23,0:23:33.11:0,33,513	0/0:54,0:54:99:0,99,1513	0/0:44,0:44:66.22:0,66,1028	0/0:39,0:39:69.22:0,69,1053	0/0:53,0:53:99:0,105,1563	0/0:34,0:34:48.16:0,48,728	0/0:14,0:19:8.50:0,9,65	0/0:12,0:12:1.65:0,2,168	0/0:29,0:28:18.06:0,18,280	0/0:33,0:33:39.13:0,39,601	0/0:46,0:46:63.20:0,63,946	0/0:28,0:28:23.95:0,24,780	0/0:23,0:23:33.11:0,33,513	0/0:41,0:41:57.19:0,57,883	0/0:26,0:26:48.16:0,48,720	0/1:16,14:33:33.28:1024,0,33	1/1:17,24:44:69.09:1610,69,0	1/1:8,3:11:9.03:212,9,0
chr10	3088478	.	A	AC	2437.08	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-8.310;DP=779;FS=2.238;HRun=4;HaplotypeScore=70.2991;InbreedingCoeff=0.9999;MQ=91.44;MQ0=0;MQRankSum=-2.310;QD=34.33;ReadPosRankSum=1.108;VQSLOD=4.2964;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,141,1568	0/0:15,0:15:42.12:0,42,476	0/0:29,0:30:78:0,78,830	0/0:35,0:35:93.21:0,93,1014	0/0:33,0:33:90.24:0,90,1010	0/0:23,0:22:69.18:0,69,771	0/0:33,0:33:90.25:0,90,1013	0/0:31,0:31:78.18:0,78,853	0/0:16,0:16:45.13:0,45,510	0/0:41,0:41:99:0,120,1352	0/0:16,0:16:39.07:0,39,428	0/0:30,0:30:84.22:0,84,943	0/0:25,0:25:72.20:0,72,815	0/0:19,0:19:54.15:0,54,612	0/0:29,0:29:81.22:0,81,908	0/0:34,0:34:96.26:0,96,1079	0/0:37,0:37:99:0,99,1122	0/0:22,0:22:66.19:0,66,748	0/0:18,0:18:51.13:0,51,570	0/0:30,0:30:87.22:0,87,967	0/0:31,0:31:87.23:0,87,977	0/0:26,0:26:72.20:0,72,817	0/0:21,0:21:57.16:0,57,647	0/0:24,0:24:69.16:0,69,759	0/0:37,0:37:99:0,105,1172	1/1:0,29:29:87.29:1188,87,0	1/1:2,24:25:69.23:941,69,0	1/1:4,12:16:33.11:451,33,0
chr10	3090218	.	A	AATGAAGGACCCTCCCTGTGC	1025.11	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=6.571;DP=814;FS=12.735;HRun=0;HaplotypeScore=409.0888;InbreedingCoeff=0.9313;MQ=77.08;MQ0=1;MQRankSum=-3.346;QD=11.78;ReadPosRankSum=-0.009;VQSLOD=0.5906;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,126,4561	0/0:17,0:17:42.11:0,42,1652	0/0:25,0:25:20.22:0,20,274	0/0:41,0:41:21.38:0,21,454	0/0:28,0:28:57.06:0,57,1654	0/0:24,0:24:42.07:0,42,1485	0/0:31,0:31:78.14:0,78,1827	0/0:20,0:20:36.05:0,36,345	0/0:29,0:29:69.17:0,69,2892	0/0:24,0:24:57.15:0,57,1911	0/0:18,0:18:39.08:0,39,1332	0/0:38,0:38:90.21:0,90,3591	0/0:31,0:31:63.10:0,63,1516	0/0:29,0:29:66.13:0,66,2070	0/0:35,0:35:93.23:0,93,3396	0/0:37,0:37:81.18:0,81,2785	0/0:25,0:25:42.08:0,42,1388	0/0:21,0:21:36.09:0,36,1531	0/0:19,0:19:39.05:0,39,1044	0/0:24,0:24:48.12:0,48,1802	0/0:61,0:61:99:0,162,5648	0/0:23,0:23:42.06:0,42,1331	0/0:24,0:24:60.07:0,60,1347	0/0:29,0:29:72.16:0,72,2819	0/0:19,0:19:48.07:0,48,1328	1/1:35,0:35:56.59:447,57,0	1/1:35,0:35:47.25:430,47,0	1/1:11,5:16:3.01:281,3,0
chr10	3091277	.	TACACACACACACAC	T	1480.16	PASS	AB=0.762;AC=5;AF=0.093;AN=54;BaseQRankSum=5.793;DP=520;FS=2.543;HRun=0;HaplotypeScore=181.0275;InbreedingCoeff=0.6270;MQ=68.64;MQ0=11;MQRankSum=-4.795;QD=34.42;ReadPosRankSum=-0.328;VQSLOD=3.3029;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:34:27.56:0,28,1469	0/0:8,0:8:21.07:0,21,1170	./.	0/0:29,0:22:12.04:0,12,215	0/0:20,0:19:36.12:0,36,1928	0/0:12,0:12:24.08:0,24,1198	0/0:11,0:12:18.06:0,18,943	0/0:30,0:29:1.55:0,2,4	0/0:16,0:16:21.07:0,21,1249	0/0:15,0:15:24.08:0,24,1397	0/0:15,0:14:24.08:0,24,1381	0/0:9,0:10:21.07:0,21,1283	0/0:10,0:10:18.02:0,18,720	0/0:13,0:12:18.06:0,18,975	0/0:21,0:20:6.02:0,6,219	0/0:15,0:16:27.09:0,27,1662	0/0:25,0:27:37.48:0,37,1811	0/0:17,0:15:15.05:0,15,948	0/0:16,0:17:26.25:0,26,977	0/0:22,0:21:33.11:0,33,1742	0/0:23,0:26:36.12:0,36,1791	0/0:15,0:17:27.09:0,27,1621	0/0:14,0:14:21.07:0,21,1272	0/0:17,0:19:30.57:0,31,1668	0/0:26,0:33:11.97:0,12,522	0/1:11,5:16:99:367,0,188	1/1:9,10:22:27.09:997,27,0	1/1:1,4:5:6.02:235,6,0
chr10	3093610	.	TG	T	1899.19	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.720;DP=742;FS=11.977;HRun=5;HaplotypeScore=70.4494;InbreedingCoeff=0.9990;MQ=84.20;MQ0=0;MQRankSum=-2.015;QD=27.52;ReadPosRankSum=2.061;VQSLOD=3.1975;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,126,1685	0/0:11,0:11:27.09:0,27,369	0/0:23,0:23:60.13:0,60,786	0/0:21,0:22:47.99:0,48,617	0/0:26,0:26:78.20:0,78,990	0/0:20,0:20:57.19:0,57,779	0/0:46,0:46:99:0,129,1715	0/0:25,0:25:69.23:0,69,943	0/0:18,0:18:54.18:0,54,738	0/0:32,0:32:93.30:0,93,1258	0/0:15,0:15:45.15:0,45,609	0/0:33,0:33:96.32:0,96,1313	0/0:27,0:27:72.19:0,72,933	0/0:26,0:26:75.24:0,75,1010	0/0:27,0:27:81.27:0,81,1107	0/0:18,0:17:51.16:0,51,681	0/0:46,0:46:99:0,132,1805	0/0:37,0:37:99:0,102,1371	0/0:14,0:14:38.86:0,39,504	0/0:22,0:22:66.21:0,66,885	0/0:43,0:42:99:0,129,1744	0/0:26,0:26:78.25:0,78,1052	0/0:20,0:20:60.20:0,60,815	0/0:31,0:31:87.29:0,87,1190	0/0:20,0:20:60.20:0,60,816	1/1:2,35:37:26.61:1055,27,0	1/1:2,20:22:57.16:646,57,0	1/1:0,10:10:30.09:340,30,0
chr10	3096275	.	A	AGATG	2987.26	PASS	AB=1.000;AC=13;AF=0.250;AN=52;BaseQRankSum=-7.385;DP=844;FS=1.809;HRun=0;HaplotypeScore=159.9415;InbreedingCoeff=0.7013;MQ=72.10;MQ0=3;MQRankSum=1.115;QD=13.46;ReadPosRankSum=-2.017;VQSLOD=3.2563;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:13,11:24:24.04:509,24,0	0/0:9,0:9:21.07:0,21,320	./.	./.	0/0:36,0:36:66.18:0,66,939	0/0:27,0:27:21.06:0,21,294	0/0:37,0:37:39.09:0,39,524	1/1:33,0:31:13.05:79,13,0	0/0:46,0:46:81.27:0,81,1238	0/0:44,0:44:57.10:0,57,819	0/0:16,0:16:18.04:0,18,253	0/0:30,0:31:54.16:0,54,783	0/0:27,0:27:48.15:0,48,712	1/1:25,18:45:42.14:974,42,0	0/0:53,0:53:34.25:0,34,828	0/0:38,0:38:48.16:0,48,734	0/0:25,0:25:33.09:0,33,480	0/1:20,0:19:1.03:1,0,249	0/0:17,0:17:3.01:0,3,46	0/0:40,0:40:48.11:0,48,650	0/0:34,0:34:48.13:0,48,690	0/0:25,0:25:36.08:0,36,505	1/1:13,13:28:33.11:769,33,0	1/1:21,14:36:33.11:766,33,0	0/1:28,0:28:8.87:9,0,447	0/0:11,0:18:21.03:0,21,214	0/0:20,0:31:21.02:0,21,195	0/1:6,0:8:43.90:52,0,44
chr10	3097560	.	A	AT	859.03	PASS	AB=0.920;AC=3;AF=0.054;AN=56;BaseQRankSum=-4.515;DP=669;FS=0.664;HRun=8;HaplotypeScore=62.7472;InbreedingCoeff=0.6841;MQ=78.66;MQ0=0;MQRankSum=-0.467;QD=14.81;ReadPosRankSum=2.029;VQSLOD=3.6134;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,31:35:85.33:953,85,0	0/0:11,0:11:30:0,30,269	0/0:20,0:20:41.70:0,42,356	0/0:11,0:10:14.38:0,14,121	0/0:20,0:20:60.03:0,60,549	0/0:26,0:26:78.01:0,78,703	0/0:20,0:20:54:0,54,489	0/0:37,0:37:99:0,108,988	0/0:24,0:24:63.03:0,63,576	0/0:25,1:26:28.41:0,28,514	0/0:21,0:21:60.03:0,60,549	0/0:31,0:31:87.03:0,87,791	0/0:20,0:20:48.02:0,48,439	0/0:17,0:17:36.01:0,36,329	0/0:22,0:22:57.03:0,57,521	0/0:18,1:19:19.40:0,19,432	0/0:34,0:34:96.05:0,96,878	0/0:20,0:20:48.01:0,48,439	0/0:19,0:19:44.99:0,45,403	0/0:33,0:33:93.05:0,93,851	0/0:18,0:18:48.01:0,48,439	0/1:21,2:23:6.20:6,0,459	0/0:23,0:23:60.03:0,60,549	0/0:26,0:26:72.04:0,72,659	0/0:32,0:32:96.05:0,96,879	0/0:29,0:29:84.05:0,84,768	0/0:37,0:37:99:0,105,961	0/0:15,0:15:39.02:0,39,357
chr10	3098072	.	ACAGCACTTTT	A	5000.87	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=11.666;DP=751;FS=1.126;HRun=0;HaplotypeScore=214.9892;InbreedingCoeff=0.9936;MQ=86.99;MQ0=0;MQRankSum=-11.976;QD=66.68;ReadPosRankSum=3.363;VQSLOD=4.7693;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,126,6118	0/0:6,0:6:15.05:0,15,795	0/0:28,0:28:81.21:0,81,3194	0/0:25,0:25:72.23:0,72,3003	0/0:33,0:33:99:0,99,5058	0/0:24,0:24:69.20:0,69,3229	0/0:26,0:26:75.26:0,75,3599	0/0:23,0:23:69.24:0,69,3375	0/0:26,0:26:78.25:0,78,3880	0/0:20,0:20:60.21:0,60,3060	0/0:16,0:16:48.15:0,48,2226	0/0:32,0:32:93.32:0,93,4856	0/0:39,0:39:99:0,114,5698	0/0:31,0:31:93.31:0,93,4681	1/1:1,25:26:57.20:1871,57,0	0/0:40,0:40:99:0,120,6131	0/0:47,0:47:99:0,138,7122	1/1:2,24:26:45.15:1390,45,0	0/0:23,0:23:60.20:0,60,2848	0/0:23,0:23:69.24:0,69,3611	0/0:21,0:21:60.19:0,60,2934	0/0:24,0:24:69.24:0,69,3463	0/0:20,0:20:56.85:0,57,2319	0/0:31,0:31:87.30:0,87,4563	1/1:1,22:23:57.20:1740,57,0	0/0:36,0:36:99:0,102,5210	0/0:26,0:26:78.23:0,78,3643	0/0:9,0:9:24.08:0,24,1005
chr10	3099871	.	TC	T	3053.63	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=4.411;DP=462;FS=1.425;HRun=5;HaplotypeScore=66.5392;InbreedingCoeff=0.9959;MQ=80.53;MQ0=0;MQRankSum=-2.639;QD=28.27;ReadPosRankSum=0.409;VQSLOD=3.8021;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,24:25:66.15:734,66,0	0/0:7,0:7:15.05:0,15,205	0/0:15,0:15:33.02:0,33,402	0/0:17,0:17:39.10:0,39,498	0/0:18,0:18:42.14:0,42,574	0/0:14,0:14:33.11:0,33,451	0/0:16,0:16:39.12:0,39,519	1/1:2,16:18:51.08:554,51,0	0/0:21,0:21:39.13:0,39,533	0/0:13,0:13:36.08:0,36,471	0/0:16,0:16:39.13:0,39,532	0/0:14,0:14:42.13:0,42,557	0/0:15,0:15:36.11:0,36,475	0/0:20,0:20:51.14:0,51,664	1/1:0,17:17:51.10:564,51,0	0/0:24,0:24:63.18:0,63,829	1/1:4,13:17:42.08:453,42,0	1/1:2,16:18:48.13:544,48,0	0/0:13,0:13:33.07:0,33,430	0/0:11,0:11:33.09:0,33,433	0/0:25,0:25:57.19:0,57,779	0/0:23,0:23:63.20:0,63,843	0/0:15,0:15:33.11:0,33,451	0/0:20,0:20:54.16:0,54,708	1/1:2,11:13:36.06:393,36,0	0/0:17,0:17:45.15:0,45,615	0/0:11,0:11:33.10:0,33,436	0/0:8,0:8:24.08:0,24,328
chr10	3099894	.	AC	A	3684.84	PASS	AB=0.933;AC=51;AF=0.911;AN=56;BaseQRankSum=-1.816;DP=428;FS=4.911;HRun=11;HaplotypeScore=64.7213;InbreedingCoeff=0.2659;MQ=77.23;MQ0=0;MQRankSum=-2.878;QD=8.92;ReadPosRankSum=3.786;VQSLOD=2.5192;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,6:26:40.70:312,41,0	1/1:2,3:6:11.01:80,11,0	0/1:11,2:12:32.49:32,0,48	0/1:13,1:13:31.95:32,0,52	1/1:7,2:11:10.04:61,10,0	1/1:3,12:16:28.04:209,28,0	1/1:5,9:14:20.95:172,21,0	0/1:11,0:11:18.54:19,0,26	1/1:4,10:16:16.03:110,16,0	1/1:7,5:12:11.96:98,12,0	1/1:6,3:10:8.02:55,8,0	0/0:15,0:15:26.97:0,27,238	1/1:9,9:18:20.13:152,20,0	1/1:8,8:20:29.10:195,29,0	1/1:9,11:21:34.92:276,35,0	1/1:8,12:24:39.03:289,39,0	1/1:8,0:22:22.39:65,22,0	1/1:4,0:16:24.44:71,24,0	1/1:4,4:9:14.02:104,14,0	1/1:9,3:12:14.95:121,15,0	1/1:12,16:29:40.95:325,41,0	1/1:8,6:14:20:154,20,0	1/1:4,7:13:12.23:104,12,0	1/1:10,9:19:26.93:221,27,0	1/1:4,0:15:24.44:71,24,0	1/1:8,5:17:29.10:193,29,0	1/1:5,3:11:21.08:139,21,0	1/1:2,1:3:2.99:25,3,0
chr10	3107772	.	C	CGTG	1086.23	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-5.341;DP=402;FS=4.001;HRun=0;HaplotypeScore=63.3555;InbreedingCoeff=0.9031;MQ=81.40;MQ0=0;MQRankSum=0.098;QD=57.17;ReadPosRankSum=2.191;VQSLOD=5.7745;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:96.33:0,96,1789	0/0:6,0:6:18.06:0,18,335	0/0:12,0:12:30.09:0,30,498	0/0:13,0:13:39.10:0,39,668	0/0:6,0:6:18.06:0,18,335	0/0:9,0:9:27.06:0,27,468	0/0:19,0:19:57.19:0,57,1033	0/0:15,0:15:42.14:0,42,754	0/0:10,0:10:30.10:0,30,559	0/0:10,0:10:30.10:0,30,559	0/0:5,0:5:15.01:0,15,242	0/0:13,0:13:36.11:0,36,640	0/0:14,0:14:42.14:0,42,780	0/0:18,0:18:54.17:0,54,949	0/0:15,0:15:39.13:0,39,727	0/0:9,0:9:27.09:0,27,503	1/1:1,18:19:48.16:1181,48,0	0/0:25,0:25:75.26:0,75,1397	0/0:11,0:11:30.10:0,30,559	0/0:6,0:6:18.06:0,18,334	0/0:51,0:51:99:0,141,2573	0/0:5,0:5:15.05:0,15,279	0/0:7,0:7:18.06:0,18,335	0/0:24,0:24:66.23:0,66,1228	0/0:6,0:6:18.03:0,18,299	0/0:16,0:16:48.15:0,48,863	0/0:21,0:20:63.13:0,63,1092	0/0:4,0:4:12.04:0,12,222
chr10	3109625	.	G	GT	1948.91	PASS	AB=0.864;AC=17;AF=0.304;AN=56;BaseQRankSum=-4.065;DP=661;FS=11.593;HRun=13;HaplotypeScore=76.8420;InbreedingCoeff=0.4124;MQ=62.71;MQ0=0;MQRankSum=-0.145;QD=6.29;ReadPosRankSum=-2.649;VQSLOD=0.7301;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,21:30:54.78:489,55,0	0/1:8,1:9:8.05:34,0,8	0/0:17,0:16:11.43:0,11,116	0/0:15,0:10:9.72:0,10,62	0/1:29,3:33:19.23:19,0,306	0/0:21,0:21:44.54:0,45,308	0/0:20,0:21:55.54:0,56,372	1/1:7,20:27:36.33:445,36,0	0/0:16,0:16:29.71:0,30,205	0/1:34,3:37:21.61:22,0,295	0/1:21,4:26:56.07:56,0,236	0/0:26,0:28:51.57:0,52,340	0/0:25,0:25:41.39:0,41,286	0/0:21,1:22:31.67:0,32,363	1/1:7,17:24:18.47:314,18,0	0/0:26,1:29:36.46:0,36,383	1/1:7,0:28:32.13:159,32,0	1/1:5,19:24:44.08:396,44,0	0/1:20,2:23:9.21:9,0,225	0/0:26,0:30:41.66:0,42,316	0/0:15,0:15:35.62:0,36,241	0/1:18,2:22:12.70:13,0,194	0/0:29,1:34:51.62:0,52,454	0/0:25,0:28:62.47:0,62,402	0/1:8,17:27:11.29:180,0,11	0/0:6,0:18:31.85:0,32,131	0/0:7,0:27:34.58:0,35,100	0/0:2,0:4:2.03:0,2,6
chr10	3109822	.	A	AATAGCTTTACTACACTTGCAGAGG	2773.29	PASS	AB=0.733;AC=34;AF=0.944;AN=36;BaseQRankSum=-3.146;DP=44;FS=13.936;HRun=0;HaplotypeScore=37.2770;InbreedingCoeff=-0.2092;MQ=125.15;MQ0=0;MQRankSum=-2.290;QD=67.64;ReadPosRankSum=-0.831;VQSLOD=0.9042;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,0:2:3.01:91,3,0	./.	0/1:6,1:8:37.17:804,0,37	0/1:2,0:4:33.80:585,0,34	1/1:1,0:1:3.01:50,3,0	./.	./.	1/1:3,0:3:9.03:178,9,0	1/1:2,0:2:5.99:90,6,0	1/1:2,0:2:6.02:213,6,0	1/1:2,0:2:5.98:70,6,0	./.	1/1:2,0:2:3.01:69,3,0	./.	1/1:2,0:2:5.94:41,6,0	./.	./.	./.	1/1:1,0:1:3.01:55,3,0	1/1:1,0:1:3.01:69,3,0	1/1:3,0:3:9.03:250,9,0	1/1:3,0:3:5.97:46,6,0	1/1:1,0:1:3.01:69,3,0	1/1:2,0:2:3.01:49,3,0	1/1:1,0:1:3.01:69,3,0	1/1:1,0:1:3.01:68,3,0	./.	./.
chr10	3125963	.	T	TA	173.15	PASS	AC=12;AF=0.300;AN=40;BaseQRankSum=-1.917;DP=79;FS=0.000;HRun=10;HaplotypeScore=77.0285;InbreedingCoeff=0.3880;MQ=29.36;MQ0=0;MQRankSum=1.018;QD=6.18;ReadPosRankSum=0.093;VQSLOD=1.4484;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,0:3:2.69:7,3,0	0/0:2,0:2:5.99:0,6,49	./.	./.	./.	0/0:4,0:4:2.96:0,3,25	0/0:1,0:1:3:0,3,25	1/1:4,8:12:2.48:224,2,0	0/0:4,0:4:8.91:0,9,66	./.	0/0:4,0:4:5.81:0,6,49	./.	0/0:6,0:6:14.93:0,15,121	0/0:5,0:5:8.81:0,9,58	0/0:1,0:1:2.50:0,2,9	0/0:2,0:2:2.91:0,3,17	1/1:3,0:3:2.04:6,2,0	./.	0/0:2,0:2:2.97:0,3,25	0/0:3,0:4:8.88:0,9,73	./.	./.	0/0:2,0:2:3:0,3,25	0/0:1,0:1:2.99:0,3,24	0/0:10,0:9:10.58:0,11,43	1/1:4,0:4:2.94:20,3,0	1/1:4,0:4:2.97:21,3,0	1/1:2,0:2:0.47:2,0,0
chr10	3126262	.	GGTGT	G	179.83	PASS	AB=0.900;AC=13;AF=0.325;AN=40;BaseQRankSum=2.791;DP=448;FS=1.636;HRun=0;HaplotypeScore=95.4816;InbreedingCoeff=0.5153;MQ=66.22;MQ0=12;MQRankSum=-3.381;QD=1.70;ReadPosRankSum=0.369;VQSLOD=1.7603;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/0:7,0:7:6.02:0,6,116	./.	./.	0/0:11,0:13:11.51:0,12,162	0/0:11,0:11:9.01:0,9,145	0/0:16,0:16:0:0,0,0	./.	0/0:10,0:11:5.75:0,6,81	0/0:11,0:11:3.01:0,3,69	0/0:8,0:8:2.80:0,3,13	0/0:14,0:16:6.91:0,7,118	0/0:8,0:11:9.03:0,9,190	0/0:10,0:12:10.32:0,10,149	./.	0/0:18,0:19:15.05:0,15,259	./.	1/1:10,0:10:3:28,3,0	1/1:21,0:21:3:28,3,0	1/1:7,1:8:3.01:45,3,0	0/0:35,0:36:8.15:0,8,162	1/1:8,1:9:3.01:45,3,0	1/1:5,1:4:3.01:45,3,0	0/1:24,3:27:0:1,0,0	./.	./.	1/1:19,0:23:12.01:112,12,0	0/0:9,0:9:1.82:0,2,5
chr10	3127919	.	T	TGGG	1267.34	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=9.270;DP=627;FS=4.977;HRun=9;HaplotypeScore=114.3705;InbreedingCoeff=0.9524;MQ=83.71;MQ0=0;MQRankSum=-1.673;QD=8.74;ReadPosRankSum=-2.641;VQSLOD=-0.3066;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:31.29:0,31,125	0/0:6,0:6:18.06:0,18,227	0/0:17,0:16:23.93:0,24,277	0/0:29,0:29:40.88:0,41,399	0/0:34,0:33:90.25:0,90,1118	0/0:17,0:17:48.15:0,48,606	0/0:22,0:22:44.99:0,45,548	1/1:4,0:8:11.97:96,12,0	0/0:20,0:20:42.10:0,42,529	0/0:30,0:30:63.12:0,63,795	0/0:27,0:28:53.96:0,54,680	0/0:30,0:30:56.80:0,57,924	0/0:28,0:28:72.17:0,72,880	0/0:23,0:23:60.10:0,60,738	1/1:10,0:35:43.66:332,44,0	0/0:23,0:23:60.14:0,60,758	1/1:10,13:27:17.50:251,18,0	1/1:4,0:8:10.21:72,10,0	0/0:14,0:14:30.05:0,30,345	0/0:28,0:28:60.14:0,60,731	0/0:12,0:12:30.02:0,30,347	0/0:34,0:34:87.18:0,87,1073	0/0:27,0:27:60.10:0,60,719	0/0:20,0:20:54.16:0,54,681	1/1:6,0:22:30.90:233,31,0	1/1:14,0:19:18.83:153,19,0	1/1:9,0:24:39.18:305,39,0	1/1:0,0:1:2.99:23,3,0
chr10	3127928	.	GA	G	426.04	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.796;DP=574;FS=0.808;HRun=1;HaplotypeScore=65.5395;InbreedingCoeff=0.8520;MQ=79.06;MQ0=0;MQRankSum=-3.344;QD=12.17;ReadPosRankSum=-0.967;VQSLOD=1.7375;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,31:35:42.74:521,43,0	0/0:7,0:7:18.06:0,18,244	0/0:14,0:13:22.39:0,22,296	0/0:22,0:22:41.04:0,41,484	0/0:31,0:30:92.87:0,93,1196	0/0:19,0:19:57.15:0,57,711	0/0:21,0:21:60.08:0,60,726	0/0:11,0:11:8.58:0,9,184	0/0:20,0:20:57.11:0,57,678	0/0:26,0:26:78.19:0,78,970	0/0:23,0:23:63.03:0,63,787	0/0:29,0:29:87.21:0,87,1077	0/0:28,0:28:84.17:0,84,1060	0/0:22,0:22:60.46:0,60,828	0/0:27,0:27:50.11:0,50,296	0/0:23,0:23:69.20:0,69,900	0/0:23,0:22:15.67:0,16,190	0/0:5,0:5:13.56:0,14,79	0/0:20,0:20:60.11:0,60,648	0/0:24,1:25:66.10:0,66,835	0/0:13,0:13:39.03:0,39,455	0/0:30,0:30:90.17:0,90,1167	0/0:20,0:20:60.17:0,60,772	0/0:21,0:21:63.14:0,63,786	0/0:19,0:19:35.66:0,36,195	0/0:15,0:15:39.01:0,39,314	0/0:22,0:22:34.68:0,35,286	0/0:3,0:3:8.73:0,9,60
chr10	3128339	.	T	TA	1737.36	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-8.099;DP=459;FS=2.696;HRun=1;HaplotypeScore=42.7809;InbreedingCoeff=0.9645;MQ=70.74;MQ0=0;MQRankSum=-1.007;QD=29.95;ReadPosRankSum=1.243;VQSLOD=3.3824;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:78.21:0,78,972	0/0:13,0:13:39.10:0,39,476	0/0:11,0:11:25.75:0,26,271	0/0:4,0:4:9.01:0,9,93	0/0:36,0:36:99:0,102,1271	0/0:10,0:10:30.07:0,30,349	0/0:9,0:9:27.06:0,27,320	0/0:31,0:31:90.25:0,90,1094	0/0:16,0:16:48.10:0,48,577	0/0:19,0:19:57.15:0,57,683	0/0:23,0:23:69.20:0,69,864	0/0:12,0:12:36.11:0,36,454	0/0:14,0:14:42.06:0,42,506	0/0:13,0:13:39.13:0,39,503	0/0:18,0:18:54.16:0,54,673	0/0:10,0:10:30.10:0,30,388	0/0:25,0:25:75.23:0,75,952	0/0:14,0:14:42.11:0,42,525	0/0:18,0:18:51.15:0,51,637	0/0:21,0:21:63.14:0,63,738	0/0:7,0:7:21.07:0,21,271	0/0:7,0:7:18.04:0,18,218	0/0:16,0:16:45.13:0,45,566	0/0:6,0:6:18.06:0,18,231	0/0:21,0:20:57.17:0,57,723	1/1:1,17:18:15.35:647,15,0	1/1:0,29:29:66.22:933,66,0	1/1:0,11:11:21.07:297,21,0
chr10	3128624	.	TATC	T	4259.73	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=12.783;DP=486;FS=8.276;HRun=0;HaplotypeScore=69.7821;InbreedingCoeff=0.9892;MQ=81.46;MQ0=0;MQRankSum=-3.828;QD=40.57;ReadPosRankSum=2.436;VQSLOD=5.5162;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,24:25:60.20:979,60,0	0/0:15,0:15:45.13:0,45,953	0/0:16,0:16:39.10:0,39,776	0/0:11,0:11:28.91:0,29,545	0/0:33,0:33:87.30:0,87,1942	0/0:13,0:13:39.13:0,39,852	0/0:7,0:7:21.07:0,21,437	0/0:25,0:25:69.24:0,69,1510	0/0:17,0:17:45.15:0,45,1005	0/0:23,0:23:69.19:0,69,1455	0/0:25,0:25:75.26:0,75,1638	0/0:24,0:24:66.23:0,66,1442	0/0:14,0:14:39.13:0,39,851	0/0:15,0:15:42.14:0,42,919	1/1:1,14:15:42.14:685,42,0	0/0:10,0:10:30.09:0,30,620	1/1:2,21:23:51.17:833,51,0	1/1:2,12:14:36.12:588,36,0	0/0:15,0:15:45.15:0,45,1005	0/0:26,0:26:75.26:0,75,1646	0/0:5,0:5:12.04:0,12,268	0/0:10,0:10:27.09:0,27,603	0/0:15,0:15:45.15:0,45,1005	0/0:6,0:6:18.06:0,18,395	1/1:0,28:28:72.25:1176,72,0	0/0:21,0:21:63.22:0,63,1370	0/0:25,0:25:72.25:0,72,1574	0/0:10,0:10:27.09:0,27,603
chr10	3129791	.	AGAGAGAG	A	2779.16	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.299;DP=462;FS=27.529;HRun=0;HaplotypeScore=127.9866;InbreedingCoeff=0.8815;MQ=86.00;MQ0=2;MQRankSum=-8.582;QD=57.90;ReadPosRankSum=6.783;VQSLOD=1.6685;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:32:84.27:0,84,2082	0/0:8,0:8:21.07:0,21,623	0/0:25,0:23:55.67:0,56,1354	0/0:46,0:36:19.81:0,20,1580	0/0:15,0:15:42.09:0,42,790	0/0:17,0:17:51.05:0,51,1420	0/0:17,0:17:48.13:0,48,1439	0/0:20,0:20:56.87:0,57,1416	0/0:16,0:16:45.14:0,45,1401	0/0:10,0:10:27.09:0,27,721	0/0:6,0:6:18.05:0,18,425	0/0:6,0:6:9.02:0,9,150	0/0:15,0:15:36.08:0,36,846	0/0:14,0:14:42.01:0,42,906	0/0:7,0:7:18.06:0,18,376	0/0:13,0:13:33.10:0,33,719	0/0:26,0:26:72.21:0,72,1810	0/0:8,0:8:21.07:0,21,487	0/0:3,0:3:9.03:0,9,216	0/0:14,0:14:32.98:0,33,658	0/0:24,0:24:63.22:0,63,1921	0/0:18,0:18:48:0,48,943	0/0:18,0:18:48.12:0,48,1079	0/0:22,0:22:57.20:0,57,1627	0/0:7,0:7:17.99:0,18,268	1/1:20,3:23:66.23:1508,66,0	1/1:21,2:23:57.20:1343,57,0	1/1:2,0:2:3.01:60,3,0
chr10	3129792	.	GAGAGA	G	2509.02	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.626;DP=462;FS=27.014;HRun=0;HaplotypeScore=111.0080;InbreedingCoeff=0.8833;MQ=84.38;MQ0=3;MQRankSum=-8.648;QD=53.38;ReadPosRankSum=6.418;VQSLOD=1.7580;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:33:84.26:0,84,1928	0/0:8,0:8:21.07:0,21,529	0/0:27,0:22:37.82:0,38,1215	0/0:45,0:35:42.56:0,43,1397	0/0:15,0:15:42.09:0,42,751	0/0:18,0:18:51.14:0,51,1223	0/0:17,0:17:45.13:0,45,1185	0/0:21,0:21:57.07:0,57,1356	0/0:16,0:16:42.13:0,42,1127	0/0:11,0:11:30.09:0,30,751	0/0:6,0:6:18.05:0,18,371	0/0:6,0:6:9.02:0,9,151	0/0:14,0:14:33.10:0,33,769	0/0:14,0:14:39.07:0,39,786	0/0:7,0:7:18.06:0,18,361	0/0:13,0:13:33.10:0,33,677	0/0:25,0:25:72.21:0,72,1606	0/0:8,0:8:21.07:0,21,441	0/0:3,0:3:9.03:0,9,192	0/0:13,0:13:32.98:0,33,621	0/0:24,0:24:63.22:0,63,1628	0/0:17,0:17:45.08:0,45,850	0/0:19,0:19:51.13:0,51,1009	0/0:22,0:22:57.20:0,57,1406	0/0:7,0:7:17.90:0,18,268	1/1:4,18:22:66.23:1371,66,0	1/1:2,21:23:57.20:1210,57,0	1/1:0,2:2:3.01:60,3,0
chr10	3129804	.	GGGGAGAGAGA	G	2385.71	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.031;DP=419;FS=1.443;HRun=0;HaplotypeScore=136.8225;InbreedingCoeff=0.8708;MQ=72.70;MQ0=10;MQRankSum=-7.988;QD=51.86;ReadPosRankSum=4.561;VQSLOD=3.5972;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:26:63.19:0,63,2093	0/0:8,0:8:20.97:0,21,684	0/0:31,0:20:46.13:0,46,836	0/0:45,0:28:43.24:0,43,1042	0/0:10,0:10:21.07:0,21,827	0/0:12,0:12:33.09:0,33,1065	0/0:13,0:13:36.58:0,37,1418	0/0:17,0:15:35.34:0,35,678	0/0:18,0:18:51.18:0,51,1993	0/0:13,0:13:33.10:0,33,1133	0/0:5,0:5:15.05:0,15,552	0/0:7,0:7:11.91:0,12,497	0/0:12,0:12:33.03:0,33,1153	0/0:15,0:15:39.12:0,39,1476	0/0:14,0:14:22.49:0,22,1014	0/0:5,0:5:10.85:0,11,404	0/0:19,0:19:49.03:0,49,2060	0/0:12,0:10:24.07:0,24,953	0/0:8,0:7:18.05:0,18,634	0/0:11,0:10:27.08:0,27,940	0/0:20,0:20:48.61:0,49,1596	0/0:12,0:13:33.11:0,33,1256	0/0:9,0:9:18.05:0,18,651	0/0:19,0:19:51.16:0,51,2134	0/0:6,0:6:12.31:0,12,326	1/1:12,10:21:54.57:1169,55,0	1/1:12,12:23:55.97:1337,56,0	0/0:1,0:1:0:0,0,0
chr10	3129807	.	GA	G	268.56	PASS	AB=0.986;AC=7;AF=0.130;AN=54;BaseQRankSum=7.684;DP=429;FS=1.968;HRun=1;HaplotypeScore=85.1614;InbreedingCoeff=0.1620;MQ=70.28;MQ0=11;MQRankSum=-3.520;QD=2.49;ReadPosRankSum=4.347;VQSLOD=-0.4739;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:31,1:28:10.24:10,0,125	0/0:6,0:6:7.88:0,8,135	0/0:30,0:18:34.97:0,35,352	0/0:46,1:29:8.81:0,9,453	0/0:11,0:11:10.59:0,11,168	0/0:11,0:11:17.48:0,17,310	0/0:13,0:13:32.48:0,32,384	1/1:17,0:15:30.92:198,31,0	0/0:19,0:19:49.54:0,50,551	0/0:16,0:16:39.03:0,39,384	0/0:7,0:7:21.01:0,21,228	0/0:9,1:10:18.01:0,18,180	0/0:11,0:11:26.81:0,27,261	0/0:16,0:16:35.90:0,36,375	0/0:15,0:15:26.03:0,26,259	0/0:5,0:5:8.31:0,8,116	0/0:19,0:19:50.54:0,51,485	0/0:9,0:7:21:0,21,208	0/1:9,0:8:5.26:5,0,133	0/0:13,0:12:7.27:0,7,205	0/0:20,0:20:47.93:0,48,491	0/0:13,0:13:9.69:0,10,222	0/0:9,1:10:21.01:0,21,211	0/0:20,0:20:35.97:0,36,533	0/1:5,0:5:6.54:7,0,50	0/1:22,0:21:40.73:84,0,41	0/1:22,0:22:25.16:91,0,25	./.
chr10	3131624	.	GCTA	G	2964.71	PASS	AB=0.518;AC=5;AF=0.089;AN=56;BaseQRankSum=10.303;DP=714;FS=7.543;HRun=0;HaplotypeScore=99.7936;InbreedingCoeff=0.7756;MQ=90.03;MQ0=0;MQRankSum=-3.664;QD=44.92;ReadPosRankSum=-0.061;VQSLOD=4.9554;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:56:99:0,163,3835	0/0:6,0:6:18.06:0,18,444	0/0:27,0:27:73.96:0,74,1734	0/0:32,0:32:83.44:0,83,2067	0/0:30,0:30:89.39:0,89,1945	0/0:21,0:21:63.22:0,63,1542	0/0:21,0:21:63.22:0,63,1526	0/0:40,0:40:99:0,120,2877	0/0:25,0:25:75.26:0,75,1841	0/0:23,0:23:69.24:0,69,1676	0/0:21,0:21:57.20:0,57,1375	0/0:21,0:21:63.20:0,63,1502	0/0:27,0:27:81.26:0,81,1895	0/0:22,0:22:66.20:0,66,1527	0/0:29,0:29:87.30:0,87,2120	0/0:21,0:20:63.20:0,63,1491	0/0:29,0:29:87.28:0,87,2095	0/0:14,0:13:42.14:0,42,1017	0/0:16,0:16:48.15:0,48,1045	0/0:39,0:39:99:0,114,2636	0/0:36,0:36:99:0,105,2521	0/0:18,0:18:54.17:0,54,1244	0/0:25,0:25:72.21:0,72,1628	0/0:30,0:30:90.27:0,90,2118	0/0:19,0:19:57.20:0,57,1379	0/1:2,27:29:60.61:1362,0,61	1/1:0,30:30:72.25:1340,72,0	1/1:0,7:7:21.07:391,21,0
chr10	3133285	.	G	GA	1990.37	PASS	AB=0.876;AC=13;AF=0.232;AN=56;BaseQRankSum=2.933;DP=593;FS=16.976;HRun=12;HaplotypeScore=77.5893;InbreedingCoeff=0.4106;MQ=55.40;MQ0=7;MQRankSum=0.180;QD=9.05;ReadPosRankSum=-1.753;VQSLOD=0.6017;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:27,16:44:5.06:486,0,5	0/0:12,0:14:34.37:0,34,231	0/0:6,0:6:9.35:0,9,62	0/1:7,0:6:1.69:10,0,2	0/0:26,0:28:39.33:0,39,378	0/0:17,0:19:39.84:0,40,274	0/0:15,1:20:14:0,14,161	0/0:20,1:23:10.78:0,11,237	0/0:16,0:18:37.77:0,38,268	0/1:11,1:12:8.33:8,0,106	0/0:28,1:31:20.75:0,21,322	0/0:24,0:27:51.06:0,51,346	0/0:19,3:22:8.61:0,9,217	0/0:16,0:16:36.24:0,36,239	0/1:32,0:32:4.40:382,0,4	0/0:17,0:17:41.75:0,42,305	0/0:25,0:28:54.76:0,55,395	0/1:17,1:18:13.31:101,0,13	0/1:14,1:15:1.39:1,0,116	0/0:23,1:27:21.60:0,22,294	0/0:12,0:10:14.89:0,15,109	0/0:16,0:16:23.77:0,24,173	0/0:14,0:15:22.86:0,23,159	0/0:32,0:33:59.39:0,59,512	1/1:19,0:19:25.47:278,25,0	0/1:9,18:27:14.53:375,0,15	1/1:12,24:36:7.26:391,7,0	1/1:3,4:5:12.02:117,12,0
chr10	3133298	.	GA	G	1154.97	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=7.069;DP=622;FS=1.078;HRun=12;HaplotypeScore=75.1893;InbreedingCoeff=0.9876;MQ=66.61;MQ0=2;MQRankSum=0.215;QD=16.04;ReadPosRankSum=1.327;VQSLOD=4.7284;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:88.58:0,89,1066	0/0:13,0:13:30.09:0,30,359	0/0:16,0:14:30.09:0,30,370	0/0:13,0:12:27.08:0,27,325	0/0:33,0:33:84.20:0,84,1003	0/0:17,0:17:45.12:0,45,541	0/0:16,0:16:44.56:0,45,478	0/0:30,0:30:76.14:0,76,919	0/0:18,0:18:48.05:0,48,545	0/0:20,0:20:50.18:0,50,597	0/0:27,0:27:78.17:0,78,937	0/0:24,0:24:57.16:0,57,687	0/0:24,0:24:51.14:0,51,616	0/0:21,0:21:54.13:0,54,658	1/1:29,3:32:69.32:602,69,0	0/0:17,0:17:45.13:0,45,553	0/0:30,0:30:67.06:0,67,791	1/1:17,4:21:42.93:347,43,0	0/0:20,0:19:45.12:0,45,550	0/0:23,0:23:57.14:0,57,670	0/0:9,0:8:24.08:0,24,301	0/0:15,0:15:45.14:0,45,563	0/0:16,0:16:42.12:0,42,515	0/0:37,0:38:99:0,105,1254	1/1:18,1:19:44.07:348,44,0	0/0:35,0:34:88.74:0,89,1053	0/0:31,0:31:67.24:0,67,806	0/0:4,0:4:12.04:0,12,149
chr10	3135678	.	A	AAAGG	8039.69	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-5.916;DP=812;FS=8.344;HRun=0;HaplotypeScore=128.6924;InbreedingCoeff=0.9994;MQ=85.28;MQ0=0;MQRankSum=-5.688;QD=49.32;ReadPosRankSum=-0.516;VQSLOD=5.2627;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:69.21:0,69,1140	0/0:12,0:12:27.09:0,27,469	0/0:25,0:25:46.93:0,47,877	0/0:32,0:32:37.64:0,38,958	0/0:33,0:33:90.29:0,90,1529	0/0:33,0:33:96.31:0,96,1612	0/0:27,0:27:66.16:0,66,1037	1/1:16,23:41:87.27:1926,87,0	0/0:26,0:26:63.22:0,63,1092	0/0:39,0:39:99:0,99,1695	0/0:19,0:19:48.14:0,48,780	0/0:36,0:36:90.29:0,90,1513	0/0:35,0:35:96.33:0,96,1669	0/0:28,0:28:78.27:0,78,1356	1/1:8,27:35:75.26:1901,75,0	0/0:26,0:26:72.25:0,72,1247	1/1:3,24:28:54.18:1371,54,0	1/1:2,13:15:33.11:821,33,0	0/0:18,0:18:39.13:0,39,670	0/0:31,0:31:84.29:0,84,1460	0/0:35,0:35:87.25:0,87,1480	0/0:30,0:30:78.26:0,78,1331	0/0:19,0:19:54.13:0,54,879	0/0:34,0:34:99:0,99,1713	1/1:9,34:44:81.01:2021,81,0	0/0:36,0:36:90.29:0,90,1536	0/0:38,0:38:99:0,105,1820	0/0:9,0:9:27.09:0,27,469
chr10	3137407	.	G	GAA	776.57	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-1.723;DP=662;FS=12.951;HRun=9;HaplotypeScore=78.2639;InbreedingCoeff=0.9638;MQ=75.70;MQ0=0;MQRankSum=0.569;QD=25.89;ReadPosRankSum=-5.950;VQSLOD=0.3983;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:66.11:0,66,690	0/0:17,0:17:42.09:0,42,447	0/0:21,0:20:21.41:0,21,333	0/0:17,0:18:28.40:0,28,275	0/0:25,0:27:60.06:0,60,682	0/0:26,0:26:78.18:0,78,822	0/0:17,0:18:53.87:0,54,554	1/1:7,22:30:68.49:871,68,0	0/0:23,0:23:60.13:0,60,630	0/0:33,0:33:87.18:0,87,906	0/0:21,0:21:54.12:0,54,574	0/0:26,0:26:75.17:0,75,797	0/0:27,0:27:69.15:0,69,734	0/0:28,0:28:75.17:0,75,789	0/0:35,0:36:98.96:0,99,1033	0/0:27,0:27:72.16:0,72,757	0/0:23,0:23:54.11:0,54,575	0/0:6,0:6:15.02:0,15,159	0/0:17,0:17:40.99:0,41,393	0/0:39,0:39:99:0,105,1109	0/0:13,0:13:33.07:0,33,351	0/0:24,0:24:63.15:0,63,669	0/0:21,0:21:48.06:0,48,508	0/0:12,0:12:27.04:0,27,287	0/0:28,0:29:60.04:0,60,686	0/0:36,0:36:68.86:0,69,923	0/0:32,0:31:93.18:0,93,976	0/0:6,0:6:15.03:0,15,160
chr10	3139380	.	TTGTGTGTGTGTGTG	T	410.12	PASS	AB=0.905;AC=5;AF=0.096;AN=52;BaseQRankSum=3.761;DP=576;FS=0.000;HRun=0;HaplotypeScore=199.0416;InbreedingCoeff=0.4659;MQ=64.17;MQ0=14;MQRankSum=-3.022;QD=7.74;ReadPosRankSum=0.199;VQSLOD=2.5270;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:21.07:0,21,904	0/0:5,0:5:3.01:0,3,142	./.	./.	0/0:17,0:16:6.02:0,6,179	0/0:15,0:14:15.05:0,15,796	0/0:25,0:23:15.05:0,15,711	0/0:37,0:37:25.72:0,26,392	0/0:19,0:19:13.60:0,14,599	0/0:18,0:18:16.41:0,16,642	0/0:10,0:10:3.01:0,3,116	0/0:13,0:13:6.02:0,6,307	0/0:8,0:8:3.48:0,3,143	0/0:19,0:19:12.51:0,13,629	0/0:29,0:29:28.67:0,29,1282	0/0:18,0:16:18.06:0,18,820	0/0:23,0:23:28.65:0,29,1456	0/0:9,0:9:4.26:0,4,166	0/0:27,0:27:6.44:0,6,220	0/0:18,0:16:9.03:0,9,483	0/0:45,0:45:12.02:0,12,418	0/0:16,0:16:21.54:0,22,1216	0/0:19,0:19:24.08:0,24,1335	0/0:30,0:30:26.08:0,26,1355	0/0:20,0:20:7.63:0,8,247	0/1:17,0:18:3.60:17,0,4	1/1:13,7:21:6.02:214,6,0	1/1:9,3:11:9.03:290,9,0
chr10	3139522	.	T	TAAGA	5680.62	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-12.721;DP=641;FS=3.507;HRun=0;HaplotypeScore=94.6636;InbreedingCoeff=0.9706;MQ=88.99;MQ0=1;MQRankSum=-0.294;QD=58.56;ReadPosRankSum=3.509;VQSLOD=6.5565;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,132,2394	0/0:10,0:10:30.08:0,30,518	0/0:19,0:19:51.17:0,51,913	0/0:32,0:31:81.21:0,81,1385	0/0:22,0:22:66.23:0,66,1206	0/0:16,0:16:42.14:0,42,744	0/0:24,0:24:66.23:0,66,1200	0/0:37,0:37:96.33:0,96,1754	0/0:28,0:28:81.26:0,81,1437	0/0:25,0:25:63.21:0,63,1152	0/0:13,0:12:36.12:0,36,647	0/0:18,0:18:54.18:0,54,966	0/0:25,0:25:69.22:0,69,1239	0/0:32,0:32:84.29:0,84,1530	1/1:6,32:39:93.32:2454,93,0	0/0:24,0:24:66.23:0,66,1206	1/1:4,21:23:45.15:1167,45,0	1/1:0,20:20:54.19:1426,54,0	0/0:16,0:16:39.11:0,39,672	0/0:25,0:25:69.22:0,69,1238	0/0:18,0:18:54.16:0,54,953	0/0:18,0:18:45.15:0,45,828	0/0:16,0:16:48.14:0,48,851	0/0:30,0:30:87.26:0,87,1530	1/1:1,11:13:24.08:633,24,0	0/0:23,0:23:63.20:0,63,1128	0/0:25,0:25:69.24:0,69,1269	0/0:2,0:2:6.02:0,6,110
chr10	3141368	.	T	TTGTTAGGCAA	18478.02	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=10.791;DP=820;FS=1.984;HRun=0;HaplotypeScore=239.9908;InbreedingCoeff=0.9967;MQ=77.92;MQ0=0;MQRankSum=-16.738;QD=126.56;ReadPosRankSum=-4.095;VQSLOD=3.7605;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:75.24:0,75,2367	0/0:21,0:21:57.20:0,57,1792	0/0:25,0:25:66.20:0,66,1763	0/0:19,0:19:41.24:0,41,1236	0/0:35,0:35:99:0,99,3061	0/0:28,0:28:84.26:0,84,2575	0/0:33,0:33:93.29:0,93,2746	1/1:27,15:46:99:6113,135,0	0/0:24,0:24:72.25:0,72,2320	0/0:35,0:35:87.30:0,87,2838	0/0:23,0:23:66.23:0,66,2162	0/0:27,0:27:81.26:0,81,2332	0/0:40,0:40:99:0,117,3756	0/0:29,0:29:84.29:0,84,2634	1/1:17,29:47:99:6243,135,0	0/0:40,0:40:99:0,111,3484	1/1:5,9:15:24.08:1194,24,0	1/1:4,3:9:18.06:951,18,0	0/0:27,0:27:78.26:0,78,2401	0/0:37,0:37:99:0,105,3329	0/0:34,0:34:96.32:0,96,3006	0/0:42,0:42:99:0,117,3604	0/0:32,0:32:87.28:0,87,2738	0/0:27,0:27:78.27:0,78,2516	1/1:9,20:29:84.29:3978,84,0	0/0:28,0:28:81.28:0,81,2659	0/0:33,0:33:96.33:0,96,3082	0/0:8,0:8:20.97:0,21,616
chr10	3142210	.	C	CA	2547.97	PASS	AB=0.944;AC=10;AF=0.179;AN=56;BaseQRankSum=-10.720;DP=473;FS=7.748;HRun=7;HaplotypeScore=43.3941;InbreedingCoeff=0.7244;MQ=73.26;MQ0=0;MQRankSum=-0.198;QD=25.74;ReadPosRankSum=-0.389;VQSLOD=3.6153;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:72.10:0,72,694	0/1:7,1:8:18.22:18,0,127	0/1:9,0:9:7.11:7,0,150	0/0:6,0:6:18.03:0,18,174	0/0:27,0:27:72.09:0,72,688	0/0:24,0:24:63.07:0,63,601	0/0:5,0:5:15.01:0,15,139	0/0:26,0:26:63.09:0,63,608	0/0:14,0:14:36.05:0,36,348	0/0:28,0:28:81.12:0,81,776	0/0:17,0:17:45.07:0,45,434	0/0:16,0:16:39:0,39,367	0/0:21,0:21:54.08:0,54,521	0/0:15,0:15:45.06:0,45,429	1/1:0,17:17:51.16:616,51,0	0/0:13,0:13:36.05:0,36,348	1/1:2,20:22:34.22:696,34,0	1/1:3,10:13:27.08:326,27,0	0/0:15,0:15:36.05:0,36,344	0/0:24,0:24:66.10:0,66,637	0/0:2,0:2:3:0,3,29	0/0:10,0:10:26.99:0,27,251	0/0:21,0:21:60.09:0,60,579	0/0:12,0:12:30.04:0,30,290	1/1:0,30:30:87.27:1051,87,0	0/0:22,0:22:66.11:0,66,637	0/0:21,0:21:63.09:0,63,602	0/0:3,0:3:9.01:0,9,87
chr10	3142360	.	G	GCACA	2830.40	PASS	AB=0.779;AC=16;AF=0.286;AN=56;BaseQRankSum=0.344;DP=682;FS=11.175;HRun=0;HaplotypeScore=113.4100;InbreedingCoeff=0.7783;MQ=54.00;MQ0=27;MQRankSum=0.251;QD=13.87;ReadPosRankSum=1.098;VQSLOD=2.8481;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:15,1:28:5.39:96,5,0	0/0:14,0:14:18.96:0,19,337	0/0:53,0:14:19.25:0,19,233	0/0:65,0:17:9.02:0,9,125	0/0:24,0:23:47.92:0,48,683	0/0:25,0:25:45.14:0,45,704	0/0:10,0:11:9.02:0,9,125	0/1:30,0:32:11.65:519,0,12	0/0:18,0:19:39.13:0,39,612	0/0:20,0:23:30.01:0,30,408	0/0:20,0:23:42.06:0,42,563	0/0:25,0:25:38.55:0,39,740	0/0:20,0:20:30.08:0,30,439	0/0:20,0:20:26.90:0,27,387	1/1:11,13:26:20.81:448,21,0	0/0:28,0:31:66:0,66,987	1/1:9,15:24:17.73:359,18,0	1/1:11,8:20:17.53:315,18,0	0/0:10,0:10:15.04:0,15,201	0/0:25,0:27:26.94:0,27,503	0/0:22,0:27:62.52:0,63,854	0/0:12,0:15:18.05:0,18,271	0/0:27,0:28:48.13:0,48,710	0/0:14,0:15:39.12:0,39,605	0/1:8,12:21:30.77:285,0,31	1/1:8,0:14:21.05:350,21,0	1/1:7,1:19:18.06:323,18,0	1/1:3,2:14:18.05:330,18,0
chr10	3142897	.	CCTCCTT	C	2682.46	PASS	AB=1.000;AC=48;AF=0.857;AN=56;BaseQRankSum=-3.257;DP=323;FS=6.971;HRun=0;HaplotypeScore=58.2614;InbreedingCoeff=-0.0118;MQ=51.31;MQ0=21;MQRankSum=1.288;QD=8.65;ReadPosRankSum=-3.823;VQSLOD=-0.3032;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:16:26.67:192,27,0	1/1:4,0:4:7.36:55,7,0	1/1:27,0:3:2.92:17,3,0	0/1:31,0:7:9.02:28,0,9	1/1:9,0:8:15.87:129,16,0	1/1:14,0:13:25.24:193,25,0	0/1:8,0:8:52.32:98,0,52	1/1:6,20:24:52.46:603,52,0	1/1:6,0:6:10.96:78,11,0	0/1:9,0:7:19.65:68,0,20	1/1:8,0:8:12.81:101,13,0	1/1:3,0:2:5.99:50,6,0	1/1:2,0:2:3.01:45,3,0	1/1:6,0:4:3:27,3,0	1/1:13,1:14:2.78:69,3,0	1/1:6,0:6:14.64:99,15,0	1/1:9,0:9:2.01:7,2,0	1/1:16,0:15:1.55:4,2,0	0/1:13,0:12:0.52:128,0,1	1/1:9,0:8:2.94:18,3,0	0/1:20,0:18:18.63:161,0,19	1/1:10,0:10:17.94:144,18,0	0/1:6,0:6:40.15:40,0,72	1/1:5,0:4:6.78:41,7,0	0/0:13,0:12:4.22:0,4,24	1/1:15,0:15:29.95:230,30,0	1/1:13,0:11:22.36:161,22,0	1/1:3,0:3:4.22:24,4,0
chr10	3142900	.	CCTT	C	3419.37	PASS	AB=0.889;AC=52;AF=0.929;AN=56;BaseQRankSum=-3.147;DP=303;FS=7.361;HRun=0;HaplotypeScore=42.7301;InbreedingCoeff=-0.1207;MQ=51.62;MQ0=17;MQRankSum=-0.189;QD=11.29;ReadPosRankSum=-2.446;VQSLOD=0.9598;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:12:26.67:192,27,0	1/1:5,0:5:15:130,15,0	1/1:22,0:3:2.92:17,3,0	0/1:30,0:8:9.49:42,0,9	1/1:10,0:9:20.97:176,21,0	1/1:14,0:13:29.90:244,30,0	0/1:8,0:8:9.57:119,0,10	1/1:25,0:23:56.55:441,57,0	1/1:5,0:5:11.90:93,12,0	1/1:8,0:6:9.46:81,9,0	1/1:10,0:10:20.92:175,21,0	1/1:3,0:2:5.99:50,6,0	1/1:2,0:2:2.99:24,3,0	1/1:6,0:4:6.47:53,6,0	1/1:3,11:14:6.01:79,6,0	1/1:7,0:7:19.19:150,19,0	1/1:1,6:7:6.02:102,6,0	1/1:2,12:13:3.01:51,3,0	1/1:11,0:10:1.37:137,1,0	1/1:5,3:7:2.94:18,3,0	1/1:19,0:17:23.56:278,24,0	1/1:10,0:10:20.93:169,21,0	0/1:5,0:5:20.88:45,0,21	1/1:5,0:4:8.89:60,9,0	0/1:3,7:9:0.60:45,0,1	1/1:12,0:12:29.71:231,30,0	1/1:15,0:13:27.07:172,27,0	1/1:3,0:3:6.85:47,7,0
chr10	3143072	.	CT	C	892.19	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.207;DP=584;FS=3.726;HRun=3;HaplotypeScore=55.7119;InbreedingCoeff=0.9952;MQ=82.76;MQ0=0;MQRankSum=-0.826;QD=29.74;ReadPosRankSum=-4.172;VQSLOD=1.7157;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:66.22:0,66,932	0/0:7,0:7:21.06:0,21,280	0/0:18,0:19:47.82:0,48,625	0/0:20,0:20:51.04:0,51,643	0/0:25,0:25:72.23:0,72,1020	0/0:25,0:25:72.22:0,72,1000	0/0:28,0:28:84.28:0,84,1208	1/1:3,27:30:81.24:987,81,0	0/0:20,0:20:57.19:0,57,820	0/0:33,0:33:99:0,99,1425	0/0:15,0:15:42.14:0,42,604	0/0:17,0:17:48.16:0,48,690	0/0:12,0:12:36.12:0,36,518	0/0:17,0:17:48.15:0,48,673	0/0:20,0:20:60.20:0,60,860	0/0:19,0:19:57.18:0,57,803	0/0:25,0:23:75.24:0,75,1062	0/0:32,0:32:93.26:0,93,1293	0/0:21,0:21:57.18:0,57,803	0/0:22,0:22:66.21:0,66,931	0/0:15,0:15:45.15:0,45,647	0/0:27,0:27:81.27:0,81,1167	0/0:27,0:27:78.23:0,78,1100	0/0:16,0:16:45.15:0,45,648	0/0:24,0:24:69.23:0,69,993	0/0:15,0:15:42.13:0,42,588	0/0:19,0:18:48.16:0,48,691	0/0:10,0:10:30.10:0,30,432
chr10	3143180	.	ATGTGTGTGTGTG	A	2223.23	PASS	AB=0.750;AC=8;AF=0.143;AN=56;BaseQRankSum=7.280;DP=644;FS=8.023;HRun=0;HaplotypeScore=228.7728;InbreedingCoeff=0.6841;MQ=61.14;MQ0=6;MQRankSum=-9.429;QD=22.69;ReadPosRankSum=-3.310;VQSLOD=1.2617;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:18:6.38:0,6,34	0/1:4,1:5:97.74:98,0,349	0/0:20,0:12:22.57:0,23,412	0/0:31,0:21:44.94:0,45,1686	0/0:20,0:20:51.18:0,51,3026	0/0:30,0:31:66.15:0,66,3558	0/0:22,0:25:60.19:0,60,3160	0/0:16,0:28:40.25:0,40,679	0/0:23,0:24:63.20:0,63,3276	0/0:20,0:22:60.21:0,60,3262	0/0:23,0:24:48.16:0,48,2554	0/0:19,0:19:48.15:0,48,2689	0/0:22,0:24:59.51:0,60,3211	0/0:20,0:21:51.17:0,51,2667	1/1:6,21:27:44.50:644,45,0	0/0:33,0:35:92.66:0,93,4897	1/1:10,16:26:23.99:603,24,0	0/1:7,7:14:71.66:219,0,72	0/0:20,0:21:36.12:0,36,1500	0/0:16,0:17:45.11:0,45,2019	0/0:23,0:25:72.06:0,72,3187	0/0:23,0:23:57.20:0,57,3223	0/0:15,0:15:42.13:0,42,1989	0/0:32,0:32:84.29:0,84,4717	1/1:4,22:26:56.59:813,57,0	0/0:10,0:29:60.18:0,60,831	0/0:6,0:27:63.17:0,63,775	0/0:6,0:11:18:0,18,204
chr10	3145920	.	GTA	G	2952.68	PASS	AB=0.849;AC=19;AF=0.352;AN=54;BaseQRankSum=7.384;DP=236;FS=6.318;HRun=0;HaplotypeScore=31.0094;InbreedingCoeff=0.5922;MQ=86.17;MQ0=1;MQRankSum=0.160;QD=19.55;ReadPosRankSum=1.188;VQSLOD=2.1137;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,7:11:21.07:267,21,0	0/0:5,0:5:9.03:0,9,151	0/1:9,0:6:3.30:3,0,43	0/1:16,0:11:7.16:7,0,112	0/0:6,0:6:15.05:0,15,248	0/0:4,0:4:6:0,6,74	0/0:4,0:4:9.03:0,9,151	1/1:4,24:28:72.21:890,72,0	0/0:8,0:8:21.07:0,21,349	0/0:4,0:4:6.02:0,6,100	0/0:4,0:4:6.01:0,6,69	0/0:8,0:8:15.04:0,15,222	0/0:5,0:5:12.04:0,12,201	0/0:5,0:5:3.01:0,3,50	1/1:4,2:6:3.01:38,3,0	0/0:3,0:3:9.03:0,9,150	1/1:8,18:27:47.98:586,48,0	1/1:3,12:15:33.11:420,33,0	0/0:4,0:4:12.04:0,12,201	0/0:7,0:7:12.04:0,12,201	0/0:9,0:9:18.06:0,18,301	./.	0/0:3,0:3:3.01:0,3,50	0/0:4,0:4:6.02:0,6,100	1/1:1,6:7:18.06:229,18,0	0/1:2,4:6:35.17:124,0,35	1/1:4,3:7:6.02:76,6,0	1/1:0,17:17:39.12:496,39,0
chr10	3146616	.	C	CCT	2050.91	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.002;DP=802;FS=3.601;HRun=0;HaplotypeScore=94.5017;InbreedingCoeff=0.9993;MQ=80.91;MQ0=0;MQRankSum=-4.946;QD=40.21;ReadPosRankSum=0.432;VQSLOD=5.0916;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,44:51:99:2146,126,0	0/0:13,0:13:39.13:0,39,513	0/0:26,0:26:63.17:0,63,780	0/0:22,0:22:30.10:0,30,489	0/0:25,0:25:72.22:0,72,931	0/0:22,0:22:60.19:0,60,789	0/0:25,0:25:75.24:0,75,985	0/0:39,0:39:99:0,102,1273	0/0:27,0:27:75.23:0,75,970	0/0:25,0:25:69.22:0,69,907	0/0:15,0:15:36.10:0,36,447	0/0:24,0:24:57.13:0,57,728	0/0:36,0:36:99:0,99,1300	0/0:37,0:37:90.27:0,90,1166	0/0:35,0:35:90.29:0,90,1183	0/0:39,0:39:99:0,111,1443	0/0:30,0:30:75.16:0,75,918	0/0:29,0:29:81.25:0,81,1046	0/0:28,0:28:54.18:0,54,710	0/0:24,0:24:60.19:0,60,788	0/0:50,0:50:99:0,123,1579	0/0:21,0:21:48.14:0,48,616	0/0:17,0:17:50.75:0,51,640	0/0:26,0:26:54.13:0,54,690	0/0:28,0:28:81.26:0,81,1064	0/0:28,0:28:75.24:0,75,973	0/0:31,0:31:84.27:0,84,1103	0/0:29,0:29:84.27:0,84,1101
chr10	3149228	.	AC	A	2853.55	PASS	AB=0.938;AC=11;AF=0.196;AN=56;BaseQRankSum=8.859;DP=510;FS=0.439;HRun=2;HaplotypeScore=54.7167;InbreedingCoeff=0.8766;MQ=79.54;MQ0=0;MQRankSum=-0.278;QD=26.18;ReadPosRankSum=-0.544;VQSLOD=3.1317;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:75.08:0,75,1067	0/0:5,0:5:15.05:0,15,224	0/0:17,0:15:19.08:0,19,273	0/1:14,0:15:18.53:19,0,172	0/0:25,0:25:69.08:0,69,886	0/0:16,0:16:42.10:0,42,565	0/0:24,0:24:65.15:0,65,946	1/1:2,32:34:93.15:1029,93,0	0/0:19,0:19:57.16:0,57,789	0/0:14,0:14:42.12:0,42,575	0/0:16,0:16:47.36:0,47,658	0/0:15,0:15:42.11:0,42,571	0/0:22,0:22:63.19:0,63,886	0/0:18,0:18:51.64:0,52,761	1/1:1,17:18:45.10:562,45,0	0/0:18,0:18:54.16:0,54,768	1/1:0,8:8:12.04:155,12,0	1/1:0,13:13:36.12:464,36,0	0/0:19,0:19:57.15:0,57,751	0/0:19,0:19:47.28:0,47,619	0/0:16,0:16:39.59:0,40,556	0/0:22,0:22:66.18:0,66,924	0/0:16,0:16:48.14:0,48,676	0/0:19,0:19:57.11:0,57,764	1/1:1,20:21:63.20:802,63,0	0/0:23,0:23:69.21:0,69,978	0/0:21,0:21:60.10:0,60,808	0/0:11,0:11:32.57:0,33,409
chr10	3149230	.	CA	C	669.19	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=12.065;DP=519;FS=3.590;HRun=10;HaplotypeScore=63.1786;InbreedingCoeff=0.8639;MQ=78.44;MQ0=0;MQRankSum=-0.459;QD=6.03;ReadPosRankSum=0.583;VQSLOD=1.2847;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:72.18:0,72,783	0/0:5,0:5:15.04:0,15,166	0/0:17,0:14:15.14:0,15,125	0/1:16,0:16:27.33:27,0,91	0/0:24,1:26:33.92:0,34,570	0/0:16,0:16:39.01:0,39,406	0/0:24,1:25:39.93:0,40,630	1/1:33,0:33:33.43:187,33,0	0/0:20,0:20:51.10:0,51,545	0/0:15,0:15:36.09:0,36,392	0/0:16,0:16:42.11:0,42,465	0/0:16,0:16:39.06:0,39,411	0/0:23,0:23:63.15:0,63,682	0/0:17,1:18:28.09:0,28,538	1/1:19,0:19:39.10:179,39,0	0/0:18,0:18:48.13:0,48,531	1/1:8,0:8:11.39:56,11,0	1/1:14,0:14:12.54:140,13,0	0/0:19,0:19:45.11:0,45,491	0/0:19,1:20:25.05:0,25,483	0/0:15,1:16:19.05:0,19,429	0/0:22,0:22:57.14:0,57,620	0/0:16,0:16:45.10:0,45,483	0/0:18,0:18:48.12:0,48,523	1/1:21,0:21:55.70:255,56,0	0/0:24,0:24:63.16:0,63,691	0/0:21,1:22:30.92:0,31,543	0/0:11,0:11:30.04:0,30,311
chr10	3152535	.	G	GA	1401.52	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-8.902;DP=813;FS=3.072;HRun=2;HaplotypeScore=84.3258;InbreedingCoeff=0.9985;MQ=81.98;MQ0=0;MQRankSum=-3.440;QD=37.88;ReadPosRankSum=0.676;VQSLOD=4.1688;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,166,2119	0/0:10,0:10:30.08:0,30,375	0/0:41,0:38:79.15:0,79,1171	0/0:39,0:38:99:0,103,1189	0/0:19,0:19:54.18:0,54,701	0/0:30,0:30:84.27:0,84,1091	0/0:36,0:36:99:0,108,1385	0/0:30,0:30:87.25:0,87,1080	0/0:29,0:29:87.28:0,87,1128	0/0:38,0:38:99:0,111,1416	0/0:22,0:22:63.20:0,63,816	0/0:38,0:38:99:0,111,1393	0/0:26,0:26:78.25:0,78,1012	0/0:28,0:28:84.27:0,84,1088	0/0:36,0:36:99:0,105,1362	0/0:33,0:33:99:0,99,1284	1/1:1,36:37:99:1496,102,0	0/0:26,0:26:72.20:0,72,913	0/0:19,0:19:57.18:0,57,728	0/0:20,0:20:60.18:0,60,762	0/0:26,0:26:78.25:0,78,1011	0/0:22,0:22:63.20:0,63,818	0/0:21,0:21:60.19:0,60,776	0/0:32,0:32:93.28:0,93,1190	0/0:27,0:27:81.25:0,81,1035	0/0:27,0:27:81.26:0,81,1038	0/0:37,0:37:99:0,108,1401	0/0:9,0:9:27.09:0,27,347
chr10	3154132	.	C	CCT	55.33	PASS	AB=0.971;AC=10;AF=0.217;AN=46;BaseQRankSum=0.981;DP=627;FS=1.424;HRun=0;HaplotypeScore=93.2256;InbreedingCoeff=0.0863;MQ=54.56;MQ0=22;MQRankSum=-0.111;QD=0.25;ReadPosRankSum=-0.407;VQSLOD=1.7521;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:31:0.87:1,0,9	0/0:6,0:8:5.82:0,6,35	./.	./.	./.	0/1:25,0:25:5.02:16,0,5	0/0:20,0:20:4.56:0,5,41	./.	0/0:19,0:20:1.50:0,2,22	0/0:28,0:29:3.38:0,3,16	0/0:19,0:19:5.75:0,6,42	0/1:22,7:28:58.63:70,0,59	0/1:22,0:22:0.13:6,0,0	0/0:14,0:14:4.04:0,4,16	0/1:21,0:22:8.17:12,0,8	0/0:22,0:22:5.92:0,6,48	0/0:17,0:17:17.31:0,17,117	0/0:13,0:12:5.02:0,5,22	0/0:17,0:15:2.58:0,3,13	0/1:21,0:21:0:0,0,0	0/1:26,0:21:0:0,0,0	0/1:19,0:18:8.82:38,0,9	./.	0/0:24,0:23:6.27:0,6,35	0/0:20,0:20:5.85:0,6,42	1/1:21,0:21:2.92:18,3,0	0/0:17,0:19:5:0,5,42	0/0:11,0:10:2.67:0,3,7
chr10	3156719	.	GAC	G	694.56	PASS	AB=0.889;AC=20;AF=0.385;AN=52;BaseQRankSum=4.216;DP=553;FS=12.984;HRun=0;HaplotypeScore=74.4205;InbreedingCoeff=-0.2884;MQ=60.68;MQ0=3;MQRankSum=-1.239;QD=2.04;ReadPosRankSum=1.452;VQSLOD=0.5162;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:29:0:0,0,0	./.	./.	0/0:33,0:21:0.47:0,0,1	0/1:21,0:20:29.71:30,0,180	0/1:24,1:25:5.24:5,0,266	0/1:13,5:19:99:110,0,111	0/0:19,0:19:6.77:0,7,63	0/1:26,1:27:5.73:6,0,248	0/0:13,0:14:6.01:0,6,71	0/1:14,1:16:20.88:21,0,122	0/1:12,1:14:50.08:50,0,97	0/0:18,0:18:18.05:0,18,236	0/1:10,2:14:63.69:64,0,163	0/0:16,0:21:26.92:0,27,248	0/1:13,3:16:47.43:47,0,161	0/0:24,0:24:0.89:0,1,2	0/0:10,0:19:21.24:0,21,178	0/1:13,0:13:5.08:5,0,81	0/0:20,0:20:7.30:0,7,338	0/1:21,5:25:62.92:63,0,232	0/1:13,2:16:41.59:42,0,202	0/1:17,2:19:11.69:12,0,224	0/1:25,5:31:79.94:80,0,382	0/1:12,1:20:20.66:21,0,104	0/1:7,6:13:23.76:152,0,24	1/1:7,3:9:6.02:65,6,0	1/1:7,2:9:6.02:65,6,0
chr10	3157236	.	AGCTGCAC	A	3620.93	PASS	AB=0.526;AC=5;AF=0.089;AN=56;BaseQRankSum=10.610;DP=737;FS=6.298;HRun=0;HaplotypeScore=167.1939;InbreedingCoeff=0.7653;MQ=81.19;MQ0=0;MQRankSum=-9.833;QD=62.43;ReadPosRankSum=3.587;VQSLOD=3.2030;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,141,5566	0/0:12,0:12:33.11:0,33,1335	0/0:22,0:22:66.21:0,66,2174	0/0:19,0:19:54.18:0,54,1790	0/0:27,0:27:81.24:0,81,2787	0/0:20,0:20:60.21:0,60,2320	0/0:29,0:29:87.30:0,87,3402	0/0:33,0:33:96.32:0,96,3575	0/0:26,0:26:75.24:0,75,2955	0/0:34,0:34:99:0,102,3922	0/0:19,0:19:57.20:0,57,2251	0/0:35,0:35:99:0,105,4193	0/0:31,0:31:93.27:0,93,3434	0/0:22,0:22:66.23:0,66,2490	0/0:35,0:35:99:0,105,4177	0/0:34,0:34:99:0,102,3806	0/0:28,0:28:78.27:0,78,3031	0/0:18,0:18:54.19:0,54,2134	0/0:26,0:26:75.26:0,75,2763	0/0:24,0:24:72.25:0,72,2624	0/0:49,0:49:99:0,144,5599	0/0:18,0:18:54.19:0,54,2020	0/0:19,0:19:48.16:0,48,1829	0/0:34,0:34:99:0,102,4053	0/0:18,0:18:51.18:0,51,2047	0/1:3,27:30:28.42:1776,0,28	1/1:2,22:24:57.20:1533,57,0	1/1:0,4:4:12.04:312,12,0
chr10	3158228	.	TTCTCTCTCTCTC	T	59.77	PASS	AB=0.967;AC=6;AF=0.158;AN=38;BaseQRankSum=1.551;DP=487;FS=5.084;HRun=0;HaplotypeScore=152.3793;InbreedingCoeff=0.3548;MQ=62.32;MQ0=16;MQRankSum=-3.147;QD=0.93;ReadPosRankSum=-0.456;VQSLOD=2.0972;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/0:7,0:7:2.84:0,3,14	./.	./.	./.	0/0:17,0:17:3.01:0,3,92	0/0:20,0:21:16.28:0,16,403	0/0:27,0:27:10.95:0,11,53	0/0:17,0:16:12.03:0,12,180	0/0:13,0:13:6.29:0,6,121	./.	0/0:21,0:21:6.02:0,6,152	0/0:18,0:19:15.52:0,16,388	0/1:17,0:17:0:0,0,0	1/1:13,6:20:8.67:51,9,0	0/0:23,0:23:9.02:0,9,237	0/1:13,0:14:42.12:91,0,42	./.	0/0:28,0:26:10.37:0,10,224	0/0:13,0:12:3:0,3,25	0/0:28,0:27:3.01:0,3,86	./.	./.	0/0:41,0:38:43.66:0,44,1176	1/1:11,2:13:2.96:19,3,0	0/0:21,0:20:12.47:0,12,396	0/0:16,0:16:12.05:0,12,427	./.
chr10	3158279	.	TCTCTCC	T	220.61	PASS	AB=0.985;AC=16;AF=0.308;AN=52;BaseQRankSum=-0.158;DP=493;FS=0.698;HRun=0;HaplotypeScore=128.2408;InbreedingCoeff=-0.1569;MQ=38.02;MQ0=75;MQRankSum=3.665;QD=0.85;ReadPosRankSum=3.706;VQSLOD=2.2978;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:12:8.75:0,9,43	0/1:9,0:8:22.67:23,0,41	./.	./.	1/1:17,0:13:8.81:59,9,0	0/0:24,0:20:2.14:0,2,70	0/0:26,0:21:1.57:0,2,154	0/0:19,0:15:37.98:0,38,234	0/1:21,0:18:15.51:16,0,111	0/1:18,5:22:78.33:78,0,211	1/1:11,0:9:5.54:28,6,0	0/0:22,0:21:27.83:0,28,137	0/1:19,0:18:30.01:30,0,34	0/1:17,0:14:3.94:4,0,31	0/1:24,0:22:3.05:3,0,55	0/0:18,0:17:38.54:0,39,238	0/1:17,0:15:43.02:45,0,43	0/0:7,0:5:4.22:0,4,24	0/1:11,0:8:21.81:22,0,148	0/0:15,0:11:7.56:0,8,40	0/0:29,0:23:6.44:0,6,28	0/1:16,0:16:6:14,0,6	0/0:18,0:14:1.22:0,1,26	0/1:41,0:34:26:26,0,246	0/0:17,0:16:8.13:0,8,39	0/1:23,0:21:12.49:12,0,300	0/0:18,0:18:16.24:0,16,256	0/1:11,0:5:4.17:4,0,28
chr10	3158281	.	TCTCC	T	387.02	PASS	AB=0.996;AC=17;AF=0.327;AN=52;BaseQRankSum=-0.269;DP=495;FS=1.409;HRun=0;HaplotypeScore=120.6685;InbreedingCoeff=-0.1893;MQ=38.38;MQ0=70;MQRankSum=5.033;QD=1.33;ReadPosRankSum=3.457;VQSLOD=2.2235;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:12:8.69:0,9,43	0/1:9,0:8:23.56:24,0,40	./.	./.	1/1:18,0:14:8.81:59,9,0	0/1:24,0:20:9.65:10,0,65	0/1:25,0:20:16.81:17,0,156	0/0:19,0:15:37.51:0,38,233	0/0:20,0:18:6.57:0,7,116	0/1:22,0:21:62.48:62,0,187	1/1:11,0:9:5.54:28,6,0	0/0:22,0:21:27.78:0,28,134	0/1:20,0:19:39.71:56,0,40	0/1:17,0:14:3.94:4,0,30	0/1:27,0:25:44.50:58,0,45	0/0:20,0:19:43.34:0,43,221	0/1:16,1:15:30.57:31,0,32	0/0:7,0:5:4.22:0,4,24	0/1:10,0:8:41.80:42,0,108	0/0:15,0:12:7.14:0,7,39	0/0:18,10:22:6.03:0,6,28	0/1:16,0:16:5.47:14,0,5	0/0:17,0:14:1.34:0,1,26	0/1:41,0:35:99:116,0,179	0/0:18,0:17:8.26:0,8,39	0/1:23,0:21:11.53:12,0,255	0/0:18,0:18:14.10:0,14,188	0/1:11,0:5:4.17:4,0,28
chr10	3158283	.	TCC	T	415.70	PASS	AB=1.000;AC=16;AF=0.308;AN=52;BaseQRankSum=0.848;DP=500;FS=2.112;HRun=3;HaplotypeScore=113.8192;InbreedingCoeff=-0.2213;MQ=38.32;MQ0=69;MQRankSum=4.686;QD=1.42;ReadPosRankSum=3.348;VQSLOD=-0.1308;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:12:8.73:0,9,42	0/1:9,0:8:29.10:29,0,39	./.	./.	1/1:18,0:14:8.81:59,9,0	0/1:25,0:21:19.36:19,0,64	0/0:23,0:18:5.81:0,6,162	0/0:20,0:16:40.48:0,40,253	0/0:19,0:18:13.25:0,13,121	0/1:24,0:23:39.54:40,0,203	0/1:12,0:10:0.62:20,0,1	0/0:17,5:21:30.21:0,30,150	0/1:20,0:19:38.09:59,0,38	0/1:17,0:14:4.65:5,0,29	0/1:27,0:25:43.26:58,0,43	0/0:20,0:19:24.80:0,25,175	0/1:18,0:16:24.02:42,0,24	0/0:7,0:5:4.22:0,4,24	0/1:12,0:10:27.34:27,0,89	0/0:15,0:12:6.26:0,6,38	0/0:28,0:22:6:0,6,27	0/1:16,0:16:4.87:15,0,5	0/0:17,0:14:0.80:0,1,25	0/1:39,0:33:99:167,0,151	0/1:20,0:19:6.31:6,0,27	0/1:24,0:22:9.68:10,0,211	0/0:17,0:17:12.88:0,13,140	0/1:11,0:5:4.39:4,0,27
chr10	3158284	.	CCCTG	C	486.87	PASS	AB=0.974;AC=14;AF=0.269;AN=52;BaseQRankSum=1.420;DP=507;FS=14.037;HRun=0;HaplotypeScore=122.5299;InbreedingCoeff=-0.3509;MQ=38.51;MQ0=68;MQRankSum=4.838;QD=1.85;ReadPosRankSum=4.367;VQSLOD=1.5245;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:13:8.56:0,9,40	0/1:9,0:8:28.56:29,0,70	./.	./.	0/1:19,0:15:12.03:85,0,12	0/1:25,0:21:22.42:22,0,93	0/0:23,0:18:9.50:0,9,343	0/0:20,0:16:40.52:0,41,270	0/0:19,0:18:20.34:0,20,198	0/1:24,0:23:71.78:72,0,313	0/1:13,0:11:9.90:34,0,10	0/0:22,0:21:37.24:0,37,296	0/1:20,0:19:71.76:72,0,107	0/1:19,0:16:10.88:11,0,76	0/0:26,0:25:17.10:0,17,74	0/0:21,0:20:14.61:0,15,283	0/0:18,0:16:8.86:0,9,80	0/0:7,0:5:4.26:0,4,40	0/1:13,0:10:22.31:22,0,90	0/1:15,0:12:2.33:2,0,63	0/0:28,0:22:6.19:0,6,46	0/1:7,9:16:10.11:10,0,21	0/0:18,0:15:8.77:0,9,55	0/1:39,0:33:99:190,0,359	0/0:21,0:20:10.34:0,10,46	0/1:24,0:22:14.33:14,0,201	0/1:17,0:17:32.17:32,0,106	0/1:10,0:5:11.08:35,0,11
chr10	3158286	.	CTG	C	310.45	PASS	AB=0.959;AC=18;AF=0.346;AN=52;BaseQRankSum=1.785;DP=517;FS=0.000;HRun=0;HaplotypeScore=117.1824;InbreedingCoeff=-0.1851;MQ=38.47;MQ0=69;MQRankSum=1.326;QD=1.00;ReadPosRankSum=0.918;VQSLOD=1.9908;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:17:0.30:0,0,0	0/0:9,0:8:6.49:0,6,79	./.	./.	0/1:22,0:18:35.30:35,0,40	0/1:25,0:21:18.87:19,0,89	0/0:21,1:17:24.55:0,25,354	0/0:19,0:16:5.93:0,6,40	0/1:18,1:17:13.92:14,0,169	0/1:24,0:23:40.95:41,0,188	0/1:11,0:10:25.70:26,0,27	0/0:21,0:20:20.47:0,20,273	0/1:18,2:19:19.53:20,0,120	0/1:19,0:16:11.26:11,0,104	0/0:26,0:25:11.95:0,12,94	0/1:22,1:22:11.38:11,0,241	0/0:20,0:18:15.30:0,15,108	0/0:9,0:7:5.91:0,6,28	0/0:13,0:10:3.40:0,3,18	0/1:14,0:12:24.84:25,0,78	0/0:28,0:22:3.01:0,3,44	0/1:17,0:17:20.71:21,0,76	0/0:18,0:15:6.02:0,6,80	0/1:39,1:34:24.93:25,0,460	0/0:22,0:21:5.38:0,5,67	0/1:17,7:22:11.23:48,0,11	1/1:15,0:15:10.27:100,10,0	1/1:8,1:4:6.01:64,6,0
chr10	3161551	.	GA	G	1329.29	PASS	AB=0.887;AC=11;AF=0.196;AN=56;BaseQRankSum=5.157;DP=565;FS=0.442;HRun=11;HaplotypeScore=71.7346;InbreedingCoeff=0.5688;MQ=76.63;MQ0=0;MQRankSum=1.441;QD=9.36;ReadPosRankSum=1.236;VQSLOD=2.6851;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:38:62.67:0,63,318	0/0:1,0:1:3.01:0,3,32	0/1:22,1:21:12.69:13,0,174	0/0:7,0:7:11.83:0,12,90	0/0:18,0:18:45.07:0,45,457	0/0:18,0:19:47.94:0,48,480	0/0:23,2:25:19.88:0,20,607	0/0:29,1:31:49.18:0,49,692	0/0:16,0:17:38.92:0,39,385	0/0:14,0:14:33.08:0,33,347	0/1:8,2:10:25.21:25,0,168	0/0:28,1:29:44.50:0,44,658	0/1:17,3:20:19.93:20,0,405	0/0:21,0:23:59.56:0,60,592	0/0:5,1:21:9.88:0,10,151	0/0:21,1:23:25.63:0,26,501	1/1:9,24:34:69.76:553,70,0	0/0:3,0:16:40.73:0,41,201	0/0:17,0:17:14.41:0,14,345	0/0:22,1:23:53:0,53,574	0/0:23,1:24:38.49:0,38,603	0/0:22,1:23:17.44:0,17,372	0/0:12,0:12:30.07:0,30,315	0/0:18,0:18:51.13:0,51,541	0/0:6,0:24:46.86:0,47,249	1/1:4,21:26:2.95:407,3,0	1/1:6,15:21:43.92:345,44,0	1/1:0,6:7:17.02:129,17,0
chr10	3164152	.	T	TG	2166.45	PASS	AB=1.000;AC=6;AF=0.107;AN=56;BaseQRankSum=-5.914;DP=637;FS=0.490;HRun=4;HaplotypeScore=65.6960;InbreedingCoeff=0.6378;MQ=81.52;MQ0=0;MQRankSum=-1.870;QD=26.42;ReadPosRankSum=0.911;VQSLOD=2.6589;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,30:30:81.27:1103,81,0	0/0:14,0:14:42.10:0,42,466	0/0:30,0:30:61.98:0,62,648	0/1:20,0:20:40.85:41,0,301	0/0:21,0:21:63.16:0,63,696	0/0:25,0:25:66.16:0,66,728	0/0:18,0:18:48.08:0,48,507	0/0:26,0:26:69.14:0,69,737	0/0:17,0:17:48.13:0,48,536	0/0:27,0:27:81.18:0,81,903	0/0:26,0:26:75.21:0,75,845	0/0:14,0:14:42.09:0,42,457	0/0:26,0:26:75.18:0,75,826	0/0:20,0:20:60.16:0,60,670	0/0:33,0:33:99:0,99,1093	0/0:23,0:23:69.17:0,69,763	1/1:1,29:30:84.28:1147,84,0	0/0:18,0:18:48.12:0,48,533	0/0:19,0:19:42.09:0,42,459	0/0:30,0:30:87.22:0,87,963	0/0:12,0:12:36.10:0,36,408	0/0:20,0:20:60.16:0,60,673	0/0:24,0:24:69.20:0,69,782	0/0:29,0:29:81.19:0,81,896	0/0:22,0:22:60.16:0,60,673	0/0:27,0:27:78.21:0,78,877	0/0:34,0:34:96.26:0,96,1080	0/1:2,0:2:10.52:11,0,28
chr10	3164681	.	TA	T	2121.64	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=10.782;DP=608;FS=3.507;HRun=12;HaplotypeScore=68.2661;InbreedingCoeff=0.9779;MQ=73.51;MQ0=0;MQRankSum=-2.155;QD=16.71;ReadPosRankSum=1.350;VQSLOD=4.9747;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,15:18:43.88:331,44,0	0/0:10,0:10:27.05:0,27,274	0/0:29,0:25:8.03:0,8,320	0/0:18,0:17:11.85:0,12,153	0/0:29,0:29:67.01:0,67,666	0/0:17,1:19:24.83:0,25,424	0/0:19,0:19:31.02:0,31,474	1/1:4,27:32:77.54:585,78,0	0/0:19,0:19:48.10:0,48,487	0/0:28,0:28:60.59:0,61,610	0/0:26,0:26:55.35:0,55,551	0/0:18,0:18:42.08:0,42,426	0/0:22,0:22:39.09:0,39,503	0/0:24,0:24:63.12:0,63,634	1/1:4,21:25:56.77:441,57,0	0/0:22,0:22:42.08:0,42,426	1/1:2,14:16:38.83:302,39,0	1/1:2,14:16:35.86:279,36,0	0/0:25,0:27:39.50:0,39,508	0/0:29,0:29:75.63:0,76,706	0/0:18,0:18:45.09:0,45,453	0/0:19,0:19:53.98:0,54,531	0/0:22,0:22:60.12:0,60,609	0/0:17,1:18:21.85:0,22,403	1/1:2,18:20:47.82:372,48,0	0/0:23,0:23:54.10:0,54,544	0/0:29,0:29:83.97:0,84,827	0/0:11,0:11:33.03:0,33,320
chr10	3167943	.	TG	T	2184.90	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=10.149;DP=769;FS=4.774;HRun=6;HaplotypeScore=77.4611;InbreedingCoeff=0.9983;MQ=58.02;MQ0=2;MQRankSum=5.560;QD=26.01;ReadPosRankSum=0.531;VQSLOD=3.9418;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,102,1320	0/0:10,0:10:30.10:0,30,395	0/0:40,0:25:59.24:0,59,737	0/0:32,0:29:61.41:0,61,766	0/0:33,0:33:90.28:0,90,1164	0/0:29,0:29:84.25:0,84,1078	0/0:18,0:18:45.12:0,45,574	0/0:40,0:40:99:0,111,1427	0/0:18,0:18:51.17:0,51,670	0/0:38,0:38:99:0,111,1460	0/0:18,0:18:51.17:0,51,670	0/0:33,0:33:93.28:0,93,1196	0/0:29,0:29:87.26:0,87,1105	0/0:32,0:32:78.18:0,78,970	0/0:25,0:25:72.20:0,72,915	0/0:28,0:28:84.25:0,84,1075	0/0:30,1:31:41.94:0,42,933	0/0:19,0:20:50.14:0,50,668	0/0:21,0:20:54.02:0,54,656	0/0:34,0:34:93.28:0,93,1194	0/0:19,0:19:51.15:0,51,655	0/0:32,0:32:90.27:0,90,1153	0/0:19,0:19:54.14:0,54,678	0/0:37,0:37:99:0,111,1431	0/0:12,0:12:36.12:0,36,473	1/1:1,31:32:93.16:975,93,0	1/1:2,40:42:99:1126,105,0	1/1:3,7:10:21.05:226,21,0
chr10	3169600	.	TG	T	2597.47	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.952;DP=511;FS=0.477;HRun=3;HaplotypeScore=49.7394;InbreedingCoeff=0.9600;MQ=63.44;MQ0=1;MQRankSum=0.453;QD=31.68;ReadPosRankSum=2.963;VQSLOD=3.5346;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:84.12:0,84,1506	0/0:7,0:7:21.07:0,21,301	0/0:19,0:12:33.09:0,33,446	0/0:19,0:15:42.04:0,42,524	0/0:16,0:16:45.13:0,45,613	0/0:26,0:26:75.22:0,75,1040	0/0:21,0:21:63.19:0,63,883	0/0:24,0:24:66.21:0,66,931	0/0:13,0:13:39.12:0,39,543	0/0:11,0:11:30.10:0,30,432	0/0:9,0:9:27.09:0,27,380	0/0:22,0:22:66.21:0,66,932	0/0:11,0:11:33.11:0,33,473	0/0:17,0:17:51.17:0,51,732	1/1:0,27:27:75.24:929,75,0	0/0:21,0:21:60.19:0,60,845	0/0:25,0:24:75.23:0,75,1059	1/1:3,33:35:73.43:1181,73,0	0/0:18,0:18:51.13:0,51,694	0/0:14,0:14:36.12:0,36,517	0/0:25,0:25:72.21:0,72,998	0/0:8,0:8:21.07:0,21,302	0/0:13,0:13:36.12:0,36,517	0/0:23,0:23:66.20:0,66,915	1/1:1,18:19:51.16:630,51,0	0/0:13,0:13:39.13:0,39,555	0/0:11,0:10:30.10:0,30,432	0/0:2,0:2:6.02:0,6,84
chr10	3171484	.	CCA	C	7390.44	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=14.876;DP=680;FS=6.784;HRun=0;HaplotypeScore=88.8681;InbreedingCoeff=0.9911;MQ=86.50;MQ0=1;MQRankSum=-6.514;QD=35.03;ReadPosRankSum=6.735;VQSLOD=7.1263;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,44:44:99:1680,120,0	0/0:13,0:13:33.11:0,33,591	0/0:21,0:21:50.85:0,51,830	0/0:25,0:25:59.43:0,59,847	0/0:37,0:37:99:0,105,1854	0/0:22,0:22:63.22:0,63,1134	0/0:22,0:22:63.22:0,63,1126	0/0:40,0:40:99:0,111,1940	0/0:16,0:16:42.13:0,42,714	0/0:22,0:22:62.02:0,62,1065	0/0:13,0:13:36.08:0,36,560	0/0:23,0:23:66.18:0,66,1091	0/0:24,0:24:72.23:0,72,1259	0/0:16,0:16:48.16:0,48,864	1/1:3,25:27:69.23:966,69,0	0/0:22,0:22:66.20:0,66,1157	1/1:2,27:29:69.23:966,69,0	1/1:1,23:24:60.20:840,60,0	0/0:13,0:13:39.13:0,39,675	0/0:24,0:24:69.24:0,69,1233	0/0:44,0:44:99:0,129,2303	0/0:27,0:27:72.23:0,72,1256	0/0:18,0:18:54.13:0,54,882	0/0:27,0:27:75.26:0,75,1351	1/1:0,32:32:75.25:1050,75,0	1/1:1,18:19:11.23:710,11,0	1/1:2,24:26:69.23:967,69,0	1/1:0,9:9:15.05:210,15,0
chr10	3174395	.	T	TTATTAAACATGTGACC	24619.06	PASS	AB=0.692;AC=15;AF=0.268;AN=56;BaseQRankSum=-1.236;DP=684;FS=18.533;HRun=0;HaplotypeScore=265.8154;InbreedingCoeff=0.9072;MQ=84.19;MQ0=0;MQRankSum=-15.786;QD=147.42;ReadPosRankSum=0.814;VQSLOD=3.5121;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,5:20:42.14:2609,42,0	0/0:10,0:10:30.06:0,30,1313	0/0:16,0:16:48.16:0,48,1683	0/0:34,0:34:90.31:0,90,3323	0/0:29,0:29:81.22:0,81,3416	0/0:28,0:28:84.29:0,84,3714	0/0:18,0:18:54.19:0,54,2474	0/0:43,0:43:99:0,117,4894	0/0:19,0:19:57.16:0,57,2331	0/0:29,0:29:87.30:0,87,3707	0/0:28,0:28:80.98:0,81,2823	0/0:32,0:32:93.31:0,93,4017	0/0:25,0:25:75.26:0,75,3456	0/0:21,0:21:63.20:0,63,2742	1/1:12,9:28:60.21:3588,60,0	0/0:25,0:25:75.26:0,75,3442	1/1:13,4:21:42.10:2331,42,0	1/1:5,2:10:21.07:1378,21,0	0/0:17,0:17:51.18:0,51,2265	0/0:45,0:45:99:0,132,5324	0/0:11,0:11:30.10:0,30,1285	0/0:32,0:32:96.10:0,96,3605	0/0:32,0:32:96.24:0,96,4054	0/0:23,0:23:69.24:0,69,2969	1/1:9,3:12:30.10:2123,30,0	0/1:15,11:27:65.53:4646,0,66	1/1:18,17:42:99:6537,105,0	1/1:4,3:7:21.07:1408,21,0
chr10	3177663	.	G	GCACACACACA	692.67	PASS	AB=1.000;AC=6;AF=0.107;AN=56;BaseQRankSum=5.326;DP=582;FS=0.000;HRun=0;HaplotypeScore=172.1353;InbreedingCoeff=0.2009;MQ=60.16;MQ0=7;MQRankSum=-5.048;QD=6.72;ReadPosRankSum=-2.487;VQSLOD=2.2369;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:33.09:0,33,693	0/0:12,0:12:36.10:0,36,991	0/0:5,0:4:2.91:0,3,60	0/0:7,0:4:2.99:0,3,24	0/0:26,0:26:60.21:0,60,1597	0/0:18,0:18:42.14:0,42,1232	0/0:33,0:32:84.27:0,84,2569	0/0:20,0:20:18.03:0,18,366	0/0:17,0:17:45.09:0,45,1052	0/0:30,0:29:78.17:0,78,2013	0/0:12,0:12:33.57:0,34,859	0/0:21,0:21:42.13:0,42,1516	0/0:12,0:11:27.09:0,27,792	0/0:21,0:21:51.59:0,52,1324	0/1:19,0:19:12.73:273,0,13	0/0:14,0:14:36.12:0,36,1096	0/1:25,0:25:30.03:30,0,445	1/1:7,15:23:8.82:273,9,0	0/0:23,0:23:60.30:0,60,1280	0/0:22,0:22:47.86:0,48,1267	0/0:42,0:42:99:0,105,2918	0/0:27,0:27:63.15:0,63,1674	0/0:22,0:21:54.19:0,54,1465	0/0:32,0:32:90.18:0,90,2361	0/0:3,12:20:0.89:0,1,2	0/1:19,0:19:99:132,0,344	0/1:15,0:15:60.13:108,0,60	0/0:8,0:8:6.02:0,6,80
chr10	3177665	.	G	GCACACACACACA	1243.25	PASS	AB=0.984;AC=11;AF=0.196;AN=56;BaseQRankSum=5.561;DP=577;FS=3.325;HRun=0;HaplotypeScore=188.2525;InbreedingCoeff=0.4971;MQ=59.86;MQ0=7;MQRankSum=-4.981;QD=9.64;ReadPosRankSum=-3.565;VQSLOD=1.7476;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:29.85:0,30,319	0/0:12,0:12:33.11:0,33,972	0/0:5,0:4:2.93:0,3,30	0/0:7,0:4:2.98:0,3,22	0/0:28,0:28:62.98:0,63,1236	0/0:18,0:18:48.04:0,48,1084	0/0:34,0:33:84.08:0,84,2523	0/1:20,0:20:86.86:87,0,150	0/0:17,0:17:35.98:0,36,904	0/0:28,0:27:68.45:0,68,1832	0/0:11,0:12:30.49:0,30,671	0/0:22,0:22:39.08:0,39,1517	0/0:11,0:10:29.96:0,30,753	0/0:20,0:20:45.58:0,46,1288	1/1:17,0:17:10.02:221,10,0	0/0:15,0:15:42.07:0,42,1174	0/1:24,0:24:99:117,0,190	1/1:23,0:21:11.25:267,11,0	0/0:22,0:21:57.50:0,58,1052	0/0:22,0:22:47.77:0,48,1021	0/0:47,0:47:99:0,105,2294	0/0:24,0:24:60.16:0,60,1555	0/0:21,0:20:54.10:0,54,1245	0/0:32,0:32:63.22:0,63,2217	0/0:16,0:16:0.47:0,0,2	0/1:19,0:20:8.16:509,0,8	1/1:1,7:14:5.93:184,6,0	1/1:2,6:11:0.78:1,1,0
chr10	3177695	.	A	ACACACACACA	1884.79	PASS	AB=1.000;AC=20;AF=0.357;AN=56;BaseQRankSum=3.585;DP=671;FS=2.934;HRun=0;HaplotypeScore=191.4279;InbreedingCoeff=0.8148;MQ=54.10;MQ0=18;MQRankSum=-8.308;QD=7.17;ReadPosRankSum=-3.121;VQSLOD=2.3304;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:35,0:35:2.19:10,2,0	0/0:14,0:14:30.10:0,30,758	1/1:26,0:9:0.47:1,0,0	0/1:21,0:7:0:0,0,0	0/0:28,0:28:30.06:0,30,684	0/0:18,0:18:12.82:0,13,639	0/0:35,0:35:68.45:0,68,1558	1/1:34,0:34:40.66:401,41,0	0/0:16,0:16:27.06:0,27,655	0/0:29,0:28:60.16:0,60,1285	0/0:24,0:24:16.75:0,17,368	0/0:22,0:23:40.94:0,41,1104	0/0:14,0:13:24.05:0,24,488	0/0:24,0:23:39.07:0,39,896	1/1:12,8:22:2.72:89,3,0	0/0:16,0:16:42.09:0,42,932	1/1:29,0:29:20.41:474,20,0	1/1:22,0:20:15.05:428,15,0	0/0:23,0:23:23.83:0,24,610	0/0:21,0:21:28.84:0,29,611	0/0:46,0:45:60.75:0,61,1309	0/0:26,0:26:42.13:0,42,1109	0/0:17,0:16:32.86:0,33,742	0/0:34,0:34:59.97:0,60,1533	0/1:20,0:20:0:0,0,0	1/1:25,0:23:27.03:459,27,0	1/1:19,0:19:9.31:175,9,0	1/1:10,0:10:3.46:25,3,0
chr10	3177827	.	TGA	T	1173.35	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.456;DP=669;FS=0.710;HRun=0;HaplotypeScore=76.5118;InbreedingCoeff=0.9840;MQ=85.46;MQ0=0;MQRankSum=-1.708;QD=40.46;ReadPosRankSum=-4.752;VQSLOD=3.4826;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,111,2055	0/0:5,0:5:15.05:0,15,290	0/0:26,0:26:78.25:0,78,1383	0/0:18,0:18:48.09:0,48,806	0/0:26,0:26:78.25:0,78,1434	0/0:15,0:15:42.14:0,42,811	0/0:26,0:26:78.25:0,78,1450	1/1:0,29:29:87.26:1268,87,0	0/0:21,0:21:63.22:0,63,1181	0/0:29,0:29:87.29:0,87,1611	0/0:22,0:22:66.23:0,66,1254	0/0:38,0:38:99:0,111,2122	0/0:18,0:18:54.18:0,54,1023	0/0:26,0:26:75.26:0,75,1424	0/0:29,0:29:87.30:0,87,1678	0/0:28,0:28:84.25:0,84,1454	0/0:34,0:34:99:0,99,1911	0/0:30,0:30:81.23:0,81,1493	0/0:18,0:18:54.19:0,54,1043	0/0:20,0:20:57.19:0,57,1039	0/0:27,0:27:78.25:0,78,1462	0/0:20,0:20:57.19:0,57,1079	0/0:23,0:23:66.20:0,66,1159	0/0:35,0:35:99:0,105,2027	0/0:17,0:17:51.17:0,51,964	0/0:23,0:23:69.19:0,69,1255	0/0:18,0:18:51.16:0,51,950	0/0:10,0:10:30.10:0,30,579
chr10	3178091	.	G	GT	246.29	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.825;DP=662;FS=6.292;HRun=6;HaplotypeScore=84.5103;InbreedingCoeff=0.8355;MQ=68.24;MQ0=0;MQRankSum=-2.103;QD=7.94;ReadPosRankSum=0.386;VQSLOD=0.4702;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,10:14:3.03:163,3,0	0/0:10,0:10:27.07:0,27,290	0/0:12,0:9:4.87:0,5,76	0/0:15,0:13:29.72:0,30,282	0/0:34,0:34:96.24:0,96,1031	0/0:27,0:27:75.19:0,75,806	0/0:17,0:17:42.08:0,42,442	0/0:40,0:40:90.21:0,90,960	0/0:18,0:18:54.11:0,54,568	0/0:23,0:23:69.17:0,69,734	0/0:36,0:36:99:0,108,1158	0/0:38,0:38:99:0,111,1166	0/0:35,0:35:99:0,105,1128	0/0:20,0:20:59.94:0,60,626	0/0:22,0:22:20.16:0,20,47	0/0:27,0:27:78.17:0,78,828	1/1:7,2:17:28.94:192,29,0	0/0:32,0:31:29.90:0,30,70	0/0:24,0:24:69.17:0,69,736	0/0:24,0:24:69.16:0,69,734	0/0:10,0:10:27.07:0,27,290	0/0:25,0:25:66.16:0,66,709	0/0:26,0:26:72.15:0,72,762	0/0:14,0:13:39.06:0,39,405	0/0:27,0:27:22.02:0,22,51	0/0:33,0:32:67.28:0,67,364	0/0:30,0:30:52.21:0,52,319	0/0:12,0:12:31.73:0,32,168
chr10	3178096	.	TG	T	3112.97	PASS	AB=0.992;AC=14;AF=0.250;AN=56;BaseQRankSum=9.115;DP=660;FS=1.260;HRun=1;HaplotypeScore=74.0690;InbreedingCoeff=0.6552;MQ=66.15;MQ0=0;MQRankSum=-1.671;QD=15.33;ReadPosRankSum=-1.492;VQSLOD=2.9677;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:15:20.42:134,20,0	0/0:10,0:10:30.05:0,30,373	0/1:10,0:7:0.61:1,0,59	0/0:14,0:12:19.96:0,20,275	0/0:34,0:34:99:0,102,1319	0/0:27,0:27:81.23:0,81,1068	0/0:16,0:16:45.12:0,45,580	0/0:34,0:34:99:0,99,1232	0/0:18,0:18:54.18:0,54,732	0/0:25,0:25:75.21:0,75,956	0/0:37,0:37:99:0,111,1442	0/0:37,0:37:99:0,111,1463	0/0:37,0:37:99:0,111,1425	0/0:20,0:20:58.73:0,59,762	1/1:7,16:23:64.48:796,64,0	0/0:27,0:27:81.21:0,81,1049	1/1:16,1:17:40.18:256,40,0	1/1:0,30:30:72.24:1004,72,0	0/0:23,0:23:69.15:0,69,863	0/0:26,0:26:78.19:0,78,981	0/0:10,0:10:30.07:0,30,375	0/0:23,0:23:69.22:0,69,922	0/0:25,0:25:72.68:0,73,946	0/0:14,0:13:41.97:0,42,507	1/1:1,27:28:57.15:760,57,0	0/1:34,0:33:64.50:147,0,65	0/1:31,1:32:31.57:149,0,32	0/1:14,0:14:18.82:48,0,19
chr10	3179381	.	CGT	C	395.92	PASS	AB=0.930;AC=13;AF=0.260;AN=50;BaseQRankSum=4.088;DP=495;FS=7.366;HRun=0;HaplotypeScore=64.2216;InbreedingCoeff=-0.0016;MQ=70.97;MQ0=4;MQRankSum=-0.259;QD=1.68;ReadPosRankSum=1.318;VQSLOD=0.6535;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:15:0,15,156	0/0:9,0:9:9.03:0,9,133	./.	./.	0/1:7,0:7:18.34:18,0,38	0/0:11,0:11:3.01:0,3,44	0/1:29,2:31:46.26:46,0,160	0/0:30,0:30:10.16:0,10,64	0/0:15,0:15:18.04:0,18,242	0/1:21,1:22:14.32:14,0,145	0/0:11,0:11:8.54:0,9,113	0/0:16,0:16:27.04:0,27,336	0/0:19,0:19:15.02:0,15,181	0/0:25,0:25:21.05:0,21,290	0/1:20,10:29:17.73:173,0,18	0/1:20,0:20:0.99:1,0,369	0/1:27,4:31:22.52:23,0,473	1/1:14,5:20:17.16:174,17,0	0/0:10,0:10:1.55:0,2,4	0/1:10,1:11:17.28:17,0,160	0/1:34,0:33:34.39:34,0,178	0/0:10,0:9:6.02:0,6,87	0/0:7,0:6:6.02:0,6,89	0/1:23,2:25:2.25:2,0,348	1/1:3,1:4:3.01:32,3,0	0/0:11,0:10:19.16:0,19,158	0/0:13,0:21:24.49:0,24,249	./.
chr10	3181751	.	A	AT	1603.66	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-10.461;DP=684;FS=6.606;HRun=10;HaplotypeScore=73.4917;InbreedingCoeff=0.8867;MQ=73.71;MQ0=1;MQRankSum=-0.970;QD=19.56;ReadPosRankSum=-0.024;VQSLOD=4.3802;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:40:59.06:0,59,171	0/0:10,0:10:20.95:0,21,172	0/0:22,0:25:43.80:0,44,316	0/0:12,0:11:9.39:0,9,75	0/0:26,0:26:71.91:0,72,591	0/0:27,0:28:76.93:0,77,622	0/0:14,1:15:3.93:0,4,236	0/0:35,0:35:83.56:0,84,686	0/0:28,0:28:68.82:0,69,554	0/0:33,0:33:86.89:0,87,714	0/0:25,0:25:71.91:0,72,590	0/0:27,0:27:68.58:0,69,553	0/0:19,0:19:46.12:0,46,388	0/0:19,0:20:55.97:0,56,449	0/0:36,1:37:95.84:0,96,787	0/0:21,0:21:45.79:0,46,412	0/0:4,0:29:36.44:0,36,106	0/0:15,0:15:38.95:0,39,320	0/0:19,0:19:41.94:0,42,345	0/0:25,0:26:73.91:0,74,590	0/0:15,0:15:38.93:0,39,318	0/0:32,0:32:86.87:0,87,710	0/0:19,0:19:53.94:0,54,443	0/0:25,0:25:65.87:0,66,536	0/0:20,0:21:49.97:0,50,400	1/1:5,30:35:62.06:860,62,0	1/1:8,27:35:38.11:615,38,0	1/1:1,11:12:5.43:263,5,0
chr10	3183097	.	C	CAAT	739.56	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=0.621;DP=591;FS=5.695;HRun=0;HaplotypeScore=92.9403;InbreedingCoeff=0.7317;MQ=69.33;MQ0=0;MQRankSum=-0.891;QD=43.50;ReadPosRankSum=1.515;VQSLOD=5.4314;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:75.24:0,75,1058	0/0:10,0:10:24.08:0,24,347	0/0:13,0:13:21.54:0,22,301	0/0:11,0:11:21.06:0,21,280	0/0:27,0:27:69.23:0,69,998	0/0:25,0:25:69.22:0,69,979	0/0:17,0:17:30.10:0,30,434	0/0:34,0:34:78.25:0,78,1095	0/0:19,0:21:54.11:0,54,736	0/0:22,0:22:57.19:0,57,825	0/0:23,0:23:60.19:0,60,851	0/0:28,0:28:60.19:0,60,849	0/0:31,0:31:84.28:0,84,1215	0/0:21,0:21:48.16:0,48,694	0/0:31,0:31:78.22:0,78,1105	0/0:24,0:25:66.18:0,66,915	1/1:3,14:17:1.75:816,2,0	0/0:12,0:12:33.11:0,33,477	0/0:17,0:17:33.10:0,33,461	0/0:14,0:15:39.08:0,39,523	0/0:18,0:18:39.13:0,39,563	0/0:11,0:11:30.10:0,30,433	0/0:18,0:18:48.15:0,48,676	0/0:21,0:21:57.14:0,57,781	0/0:17,0:17:39.13:0,39,564	0/0:19,0:19:51.17:0,51,736	0/0:38,0:38:99:0,102,1475	0/0:20,0:20:48.16:0,48,694
chr10	3183178	.	G	GGT	2260.73	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=8.394;DP=558;FS=4.460;HRun=0;HaplotypeScore=104.3394;InbreedingCoeff=0.9389;MQ=61.57;MQ0=0;MQRankSum=-4.430;QD=11.48;ReadPosRankSum=-3.012;VQSLOD=2.7726;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:22:14.74:116,15,0	0/0:7,0:7:18.05:0,18,210	0/0:23,0:14:0.88:0,1,118	0/0:12,0:5:8.59:0,9,89	0/0:21,0:21:42.12:0,42,490	0/0:32,0:33:74.87:0,75,822	0/0:10,0:11:14.87:0,15,145	1/1:13,16:30:22.56:717,23,0	0/0:14,0:14:30.09:0,30,350	0/0:23,0:28:68.02:0,68,695	0/0:18,0:18:38.95:0,39,434	0/0:24,0:25:50.92:0,51,548	0/0:18,0:22:35.77:0,36,378	0/0:11,0:11:24.07:0,24,280	1/1:12,0:13:20.79:165,21,0	0/0:12,0:15:29.92:0,30,329	1/1:16,1:17:23.92:195,24,0	1/1:16,0:16:11.58:84,12,0	0/0:26,1:27:19.03:0,19,658	0/0:20,0:21:63.02:0,63,714	0/0:25,0:25:48.14:0,48,559	0/0:12,0:12:27.08:0,27,315	0/0:12,0:12:27.08:0,27,315	0/0:23,0:24:32.83:0,33,336	1/1:22,0:23:30:275,30,0	1/1:23,0:23:31.76:217,32,0	1/1:32,0:31:51.55:376,52,0	1/1:21,0:21:43.09:325,43,0
chr10	3183195	.	G	GTGT	3171.04	PASS	AB=1.000;AC=12;AF=0.214;AN=56;BaseQRankSum=4.948;DP=577;FS=7.978;HRun=0;HaplotypeScore=110.0106;InbreedingCoeff=0.3697;MQ=60.70;MQ0=3;MQRankSum=-4.050;QD=15.25;ReadPosRankSum=2.761;VQSLOD=3.0801;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:20,0:20:36.11:36,0,88	0/0:7,0:7:21.07:0,21,338	0/1:25,0:13:3.23:3,0,380	0/0:18,0:9:17.71:0,18,249	0/0:23,0:23:69.23:0,69,1042	0/0:31,0:31:90.28:0,90,1390	0/0:11,0:11:27.08:0,27,379	0/1:32,0:32:26.07:26,0,430	0/0:15,0:15:42.11:0,42,635	0/0:29,0:29:81.23:0,81,1185	0/0:20,0:20:57.18:0,57,855	0/0:25,0:25:69.22:0,69,1054	0/0:18,0:18:45.13:0,45,667	0/0:13,0:13:39.13:0,39,590	0/1:14,0:14:80.99:81,0,101	0/0:16,0:16:39.12:0,39,591	0/1:15,0:15:85.78:86,0,91	0/0:19,0:19:7.54:0,8,452	0/0:31,0:31:78.58:0,79,1282	0/0:27,0:27:78.25:0,78,1215	0/0:20,0:20:54.17:0,54,863	0/0:14,0:14:36.12:0,36,564	0/0:13,0:13:36.12:0,36,564	0/0:19,0:19:48.14:0,48,701	0/1:22,0:22:99:159,0,114	1/1:3,18:23:15.53:873,16,0	1/1:2,29:34:55.65:1112,56,0	1/1:0,16:21:44.64:960,45,0
chr10	3183202	.	T	TG	514.56	PASS	AB=0.798;AC=5;AF=0.089;AN=56;BaseQRankSum=8.460;DP=533;FS=3.755;HRun=1;HaplotypeScore=87.1631;InbreedingCoeff=-0.0957;MQ=62.30;MQ0=3;MQRankSum=-3.914;QD=7.80;ReadPosRankSum=-0.943;VQSLOD=0.5620;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:12,0:12:62.14:64,0,62	0/0:9,0:9:24.08:0,24,332	0/0:24,0:13:19.32:0,19,421	0/0:16,0:9:26.98:0,27,318	0/0:21,0:21:63.20:0,63,853	0/0:30,0:30:87.20:0,87,1149	0/0:8,0:8:24.04:0,24,293	0/0:32,0:32:3.48:0,3,565	0/0:14,0:14:42.10:0,42,560	0/0:30,0:30:90.13:0,90,1139	0/0:20,0:20:60.17:0,60,804	0/0:22,0:22:66.17:0,66,875	0/0:17,0:17:45.08:0,45,581	0/0:14,0:14:42.14:0,42,575	0/1:7,4:11:65.51:110,0,66	0/0:15,0:15:39.10:0,39,518	0/1:9,6:15:17.14:169,0,17	0/1:12,2:14:9.68:10,0,144	0/0:32,0:32:89.13:0,89,1209	0/0:29,0:29:84.25:0,84,1140	0/0:21,0:21:57.19:0,57,791	0/0:13,0:13:39.13:0,39,538	0/0:14,0:14:42.13:0,42,565	0/0:14,0:14:39.08:0,39,503	0/1:7,7:14:44.87:277,0,45	0/0:19,0:18:44.95:0,45,456	0/0:32,0:31:36.97:0,37,458	0/0:21,0:21:21.89:0,22,300
chr10	3183204	.	G	GA	2497.86	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=5.428;DP=532;FS=4.573;HRun=0;HaplotypeScore=81.5380;InbreedingCoeff=0.9979;MQ=63.16;MQ0=3;MQRankSum=-7.320;QD=36.73;ReadPosRankSum=-1.464;VQSLOD=2.8706;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,12:12:30.10:452,30,0	0/0:9,0:9:27.09:0,27,376	0/0:23,0:13:33.10:0,33,446	0/0:17,0:10:27.07:0,27,356	0/0:22,0:22:63.21:0,63,877	0/0:29,0:29:84.27:0,84,1158	0/0:7,0:7:21.07:0,21,294	0/0:31,0:31:93.28:0,93,1244	0/0:14,0:14:42.14:0,42,580	0/0:31,0:31:90.30:0,90,1258	0/0:20,0:20:60.20:0,60,835	0/0:22,0:22:66.20:0,66,905	0/0:16,0:16:45.15:0,45,626	0/0:15,0:15:45.14:0,45,612	1/1:0,7:11:30.10:473,30,0	0/0:14,0:14:39.12:0,39,528	1/1:4,6:16:38.93:563,39,0	1/1:2,12:15:26.04:549,26,0	0/0:30,0:30:87.29:0,87,1215	0/0:29,0:29:84.28:0,84,1174	0/0:21,0:21:57.19:0,57,797	0/0:13,0:13:39.13:0,39,546	0/0:14,0:14:42.13:0,42,569	0/0:14,0:14:37.56:0,38,519	1/1:2,5:14:42.13:636,42,0	0/0:19,0:18:48.16:0,48,671	0/0:32,0:31:60.20:0,60,827	0/0:21,0:21:42.14:0,42,587
chr10	3184819	.	AAGAGAG	A	510.42	PASS	AB=1.000;AC=6;AF=0.111;AN=54;BaseQRankSum=3.934;DP=664;FS=2.271;HRun=0;HaplotypeScore=158.5702;InbreedingCoeff=0.7121;MQ=65.35;MQ0=9;MQRankSum=0.851;QD=4.40;ReadPosRankSum=0.444;VQSLOD=2.1635;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:16.50:0,17,206	0/0:6,0:6:9.03:0,9,218	0/1:27,0:15:0:0,0,0	0/1:41,0:21:0:0,0,0	0/0:35,0:36:45.12:0,45,795	0/0:10,0:17:12.51:0,13,255	0/0:18,0:32:9.01:0,9,111	0/0:34,0:33:13.37:0,13,138	0/0:28,0:28:33.11:0,33,879	0/0:26,0:27:34.73:0,35,589	0/0:18,0:18:22.46:0,22,365	0/0:15,0:15:24.06:0,24,485	0/0:35,0:36:68.23:0,68,1425	0/0:21,0:21:30.09:0,30,656	0/0:21,0:21:16.30:0,16,325	0/0:14,0:16:21.05:0,21,379	0/0:24,0:25:41.80:0,42,781	0/0:16,0:15:30.75:0,31,495	0/0:19,0:20:24.54:0,25,421	0/0:27,0:28:41.94:0,42,595	0/0:19,0:20:3.28:0,3,42	0/0:27,0:27:27.06:0,27,500	0/0:28,0:27:33.57:0,34,569	0/0:25,0:25:45.15:0,45,1042	0/0:22,0:22:21.48:0,21,313	1/1:20,14:32:35.30:506,35,0	1/1:7,7:13:4.83:113,5,0	./.
chr10	3186647	.	TACACACACATACACACACAC	T	1412.45	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=3.694;DP=772;FS=2.594;HRun=0;HaplotypeScore=368.5049;InbreedingCoeff=0.9699;MQ=56.58;MQ0=12;MQRankSum=-2.152;QD=23.94;ReadPosRankSum=-1.838;VQSLOD=1.0797;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:30,5:40:28.58:1109,29,0	0/0:10,0:10:24.07:0,24,1576	0/0:20,0:7:14.99:0,15,222	0/0:46,0:17:23.67:0,24,366	0/0:25,0:25:66.10:0,66,3061	0/0:20,0:20:39.12:0,39,2422	0/0:33,0:33:87.21:0,87,4204	0/0:33,0:32:78.18:0,78,1935	0/0:26,0:26:60.62:0,61,3231	0/0:29,0:29:72.20:0,72,3898	0/0:18,0:18:42.08:0,42,2058	0/0:34,0:34:89.37:0,89,4488	0/0:25,0:25:54.15:0,54,3040	0/0:27,0:27:69.17:0,69,4032	0/0:30,0:30:62.77:0,63,2400	0/0:32,0:32:78.14:0,78,3854	1/1:16,0:19:27.07:424,27,0	0/0:30,0:29:63.13:0,63,3272	0/0:17,0:16:29.98:0,30,742	0/0:8,0:8:23.96:0,24,966	0/0:86,0:85:99:0,212,10560	0/0:22,0:21:57.09:0,57,2468	0/0:30,0:30:74.10:0,74,3552	0/0:38,0:37:93.20:0,93,4647	0/0:14,0:14:21.07:0,21,1337	0/0:31,0:31:84.17:0,84,2937	0/0:23,0:23:53.56:0,54,1670	0/0:6,0:6:12.01:0,12,356
chr10	3186657	.	T	TAC	869.41	PASS	AB=0.884;AC=15;AF=0.288;AN=52;BaseQRankSum=2.416;DP=791;FS=2.783;HRun=0;HaplotypeScore=129.7852;InbreedingCoeff=0.1176;MQ=54.56;MQ0=16;MQRankSum=0.113;QD=2.29;ReadPosRankSum=-2.590;VQSLOD=2.0798;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:36,0:35:7.16:7,0,12	0/0:10,0:11:18.13:0,18,174	./.	./.	0/0:24,0:25:29.85:0,30,296	0/1:19,1:21:19.83:20,0,167	0/0:34,0:36:40.92:0,41,460	0/1:29,0:30:14.09:14,0,34	0/1:23,1:25:9.74:10,0,279	0/0:30,0:31:47.55:0,48,457	0/1:22,0:21:27.43:27,0,144	0/0:32,0:33:41.68:0,42,422	0/0:20,0:20:32.42:0,32,324	0/0:32,0:33:10.58:0,11,355	0/1:18,13:31:15.10:208,0,15	0/0:31,0:31:35.19:0,35,348	0/0:18,0:18:8.68:0,9,59	0/1:19,18:36:99:274,0,121	0/0:14,0:13:8.85:0,9,75	0/0:10,0:12:11.78:0,12,132	0/1:93,0:97:17.59:18,0,677	0/0:26,0:25:30.10:0,30,275	0/0:28,0:29:32.52:0,33,305	0/0:40,0:40:52.52:0,53,537	0/1:7,7:14:28.09:79,0,28	1/1:32,1:32:30.55:243,31,0	1/1:20,0:24:17.75:110,18,0	1/1:6,0:6:2.97:20,3,0
chr10	3186746	.	C	CT	6925.65	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-7.966;DP=798;FS=0.332;HRun=0;HaplotypeScore=86.1302;InbreedingCoeff=0.9994;MQ=88.66;MQ0=0;MQRankSum=-1.982;QD=44.97;ReadPosRankSum=2.896;VQSLOD=4.8141;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,46:48:99:2012,126,0	0/0:10,0:10:30.07:0,30,400	0/0:27,0:27:75.12:0,75,956	0/0:36,0:36:99:0,100,1384	0/0:21,0:21:63.21:0,63,879	0/0:24,0:24:63.17:0,63,853	0/0:34,0:34:99:0,99,1359	0/0:31,0:31:90.30:0,90,1259	0/0:30,0:30:90.30:0,90,1259	0/0:27,0:27:75.24:0,75,1035	0/0:12,0:12:36.12:0,36,503	0/0:38,0:38:99:0,114,1594	0/0:38,0:38:99:0,114,1594	0/0:31,0:31:90.28:0,90,1239	0/0:45,0:45:99:0,126,1721	0/0:32,0:32:96.32:0,96,1342	1/1:0,35:35:99:1629,102,0	0/0:26,0:26:72.24:0,72,1004	0/0:26,0:26:75.22:0,75,1014	0/0:26,0:26:78.26:0,78,1090	0/0:46,0:46:99:0,138,1888	0/0:28,0:28:81.27:0,81,1132	0/0:18,0:18:54.18:0,54,755	0/0:29,0:28:84.28:0,84,1174	0/0:9,0:9:24.08:0,24,336	1/1:0,34:34:99:1608,102,0	1/1:0,23:22:63.21:1006,63,0	1/1:0,14:14:42.14:671,42,0
chr10	3186960	.	CG	C	1438.78	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.879;DP=681;FS=1.235;HRun=4;HaplotypeScore=85.1338;InbreedingCoeff=0.9979;MQ=84.75;MQ0=1;MQRankSum=-5.746;QD=28.21;ReadPosRankSum=1.430;VQSLOD=3.2830;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,46:50:99:1534,129,0	0/0:9,0:9:27.06:0,27,358	0/0:25,0:25:73.04:0,73,927	0/0:24,0:23:54.65:0,55,612	0/0:23,0:23:63.21:0,63,881	0/0:20,0:20:57.19:0,57,798	0/0:38,0:38:99:0,114,1563	0/0:31,0:31:87.27:0,87,1183	0/0:17,0:17:48.16:0,48,672	0/0:26,0:26:75.24:0,75,1025	0/0:14,0:14:42.14:0,42,583	0/0:17,0:17:51.16:0,51,699	0/0:22,0:22:63.19:0,63,860	0/0:28,0:28:84.23:0,84,1106	0/0:23,0:23:69.20:0,69,917	0/0:18,0:18:54.18:0,54,754	0/0:32,0:32:84.28:0,84,1175	0/0:17,0:17:51.17:0,51,714	0/0:25,0:25:69.23:0,69,960	0/0:21,0:21:60.19:0,60,820	0/0:49,0:49:99:0,147,2022	0/0:27,0:27:75.25:0,75,1048	0/0:24,0:24:69.22:0,69,945	0/0:21,0:21:60.12:0,60,797	0/0:18,0:18:45.14:0,45,614	0/0:26,0:26:71.35:0,71,520	0/0:26,0:26:77.77:0,78,621	0/0:9,0:9:26.94:0,27,220
chr10	3187000	.	A	AG	7295.03	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-4.721;DP=668;FS=1.877;HRun=1;HaplotypeScore=66.5704;InbreedingCoeff=0.9986;MQ=90.61;MQ0=0;MQRankSum=-1.454;QD=37.41;ReadPosRankSum=1.933;VQSLOD=5.4066;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,37:46:99:1472,102,0	0/0:7,0:7:18.06:0,18,232	0/0:26,0:26:67.37:0,67,778	0/0:27,0:27:78.06:0,78,880	0/0:25,0:25:57.18:0,57,739	0/0:20,0:20:60.20:0,60,779	0/0:36,0:36:99:0,99,1253	0/0:49,0:49:99:0,141,1806	0/0:14,0:14:36.12:0,36,467	0/0:26,0:26:75.24:0,75,974	0/0:12,0:12:36.12:0,36,467	0/0:15,0:15:45.15:0,45,584	0/0:20,0:20:57.16:0,57,720	0/0:24,0:24:72.23:0,72,929	1/1:0,24:24:66.22:989,66,0	0/0:19,0:19:57.19:0,57,740	1/1:2,30:32:69.23:1034,69,0	1/1:0,15:15:45.15:674,45,0	0/0:21,0:21:63.20:0,63,815	0/0:22,0:22:66.21:0,66,857	0/0:45,0:45:99:0,132,1714	0/0:28,0:28:81.26:0,81,1045	0/0:21,0:21:60.19:0,60,779	0/0:16,0:16:42.14:0,42,544	1/1:2,17:19:45.14:654,45,0	1/1:0,20:20:60.16:853,60,0	1/1:0,24:24:72.24:1079,72,0	1/1:0,14:14:36.12:539,36,0
chr10	3187470	.	CG	C	5950.24	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=13.217;DP=842;FS=17.828;HRun=1;HaplotypeScore=88.3843;InbreedingCoeff=0.9999;MQ=87.14;MQ0=0;MQRankSum=-3.399;QD=39.41;ReadPosRankSum=3.970;VQSLOD=3.1868;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,54:54:99:2049,147,0	0/0:12,0:12:36.12:0,36,575	0/0:34,0:34:99:0,99,1517	0/0:27,0:27:75.23:0,75,1161	0/0:32,0:32:96.31:0,96,1510	0/0:29,0:29:87.28:0,87,1361	0/0:40,0:40:99:0,120,1888	0/0:29,0:29:87.28:0,87,1338	0/0:32,0:32:96.29:0,96,1482	0/0:38,0:38:99:0,114,1764	0/0:16,0:16:48.16:0,48,759	0/0:33,0:33:99:0,99,1581	0/0:45,0:45:99:0,135,2119	0/0:37,0:37:99:0,111,1734	0/0:41,0:41:99:0,120,1916	0/0:34,0:34:99:0,102,1620	1/1:0,31:31:87.29:1216,87,0	0/0:22,0:22:66.23:0,66,1054	0/0:19,0:19:54.18:0,54,859	0/0:26,0:26:78.27:0,78,1243	0/0:42,0:42:99:0,123,1882	0/0:30,0:30:87.30:0,87,1390	0/0:24,0:24:72.25:0,72,1140	0/0:29,0:29:87.30:0,87,1390	0/0:20,0:20:60.20:0,60,959	1/1:0,30:30:90.30:1259,90,0	1/1:0,25:25:69.23:964,69,0	1/1:0,11:11:33.11:462,33,0
chr10	3187694	.	TC	T	912.04	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.037;DP=706;FS=5.263;HRun=1;HaplotypeScore=64.7698;InbreedingCoeff=0.9956;MQ=81.50;MQ0=0;MQRankSum=-4.389;QD=35.08;ReadPosRankSum=0.352;VQSLOD=3.3926;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,26:26:72.24:1007,72,0	0/0:11,0:11:33.11:0,33,520	0/0:22,0:22:63.21:0,63,971	0/0:21,0:21:63.21:0,63,970	0/0:31,0:31:93.29:0,93,1440	0/0:23,0:23:69.24:0,69,1103	0/0:23,0:23:66.23:0,66,1055	0/0:38,0:38:99:0,114,1801	0/0:26,0:26:78.27:0,78,1247	0/0:34,0:34:99:0,102,1631	0/0:23,0:23:69.24:0,69,1100	0/0:31,0:31:93.32:0,93,1481	0/0:34,0:34:99:0,102,1622	0/0:24,0:24:72.24:0,72,1139	0/0:33,0:33:96.30:0,96,1489	0/0:34,0:34:99:0,102,1631	0/0:30,0:30:87.30:0,87,1390	0/0:13,0:13:39.13:0,39,614	0/0:14,0:14:42.13:0,42,651	0/0:30,0:30:87.30:0,87,1390	0/0:25,0:25:75.26:0,75,1199	0/0:24,0:24:72.22:0,72,1106	0/0:23,0:23:66.23:0,66,1055	0/0:28,0:28:84.29:0,84,1343	0/0:24,0:24:72.21:0,72,1103	0/0:25,0:25:72.25:0,72,1152	0/0:29,0:29:87.30:0,87,1390	0/0:7,0:7:21.07:0,21,336
chr10	3188824	.	A	AT	1170.25	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-8.982;DP=590;FS=0.000;HRun=9;HaplotypeScore=61.1221;InbreedingCoeff=0.9473;MQ=68.25;MQ0=0;MQRankSum=-0.255;QD=22.08;ReadPosRankSum=-1.147;VQSLOD=3.9345;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:2,0:34:59.99:0,60,186	0/0:11,0:11:32.99:0,33,287	0/0:9,0:9:20.03:0,20,160	0/0:11,0:10:26.98:0,27,231	0/0:27,0:27:44.18:0,44,568	0/0:19,0:20:52.98:0,53,442	0/0:19,0:19:35.97:0,36,309	0/0:36,0:36:80.91:0,81,697	0/0:14,1:15:5.81:0,6,279	0/0:21,0:21:50.95:0,51,440	0/0:18,0:19:40.99:0,41,343	0/0:16,0:16:44.99:0,45,390	0/0:22,0:22:59.98:0,60,521	0/0:23,0:23:53.94:0,54,465	0/0:20,0:20:59.94:0,60,507	0/0:25,0:25:71.96:0,72,618	0/0:28,1:29:47.81:0,48,644	0/0:24,0:24:65.94:0,66,566	0/0:24,0:24:65.98:0,66,573	0/0:36,0:36:98.98:0,99,859	0/0:18,0:18:44.96:0,45,383	0/0:19,0:19:50.98:0,51,443	0/0:18,0:18:50.98:0,51,442	0/0:21,0:21:59.94:0,60,514	0/0:18,0:18:44.97:0,45,391	1/1:4,22:26:14.06:611,14,0	1/1:4,17:21:48.12:531,48,0	1/1:0,6:6:15.04:166,15,0
chr10	3190725	.	TCTCTCTCTCTCG	T	1431.86	PASS	AB=0.853;AC=13;AF=0.232;AN=56;BaseQRankSum=0.528;DP=669;FS=12.645;HRun=0;HaplotypeScore=188.0451;InbreedingCoeff=0.6323;MQ=70.80;MQ0=27;MQRankSum=0.559;QD=8.73;ReadPosRankSum=1.848;VQSLOD=1.9283;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:5,19:24:20.37:74,0,20	0/0:16,0:16:29.85:0,30,570	0/0:39,0:21:18.74:0,19,181	0/0:59,0:23:7.78:0,8,149	0/0:20,0:20:35.84:0,36,635	0/0:27,0:27:36.50:0,37,556	0/0:18,0:17:29.05:0,29,612	0/0:41,0:40:79.07:0,79,681	0/0:24,0:24:32.81:0,33,676	0/0:18,0:18:41.08:0,41,1295	0/0:15,0:15:26.81:0,27,466	0/0:20,0:20:31.21:0,31,813	0/0:29,0:29:47.59:0,48,970	0/0:25,0:25:47.72:0,48,1364	1/1:21,0:21:3.01:50,3,0	0/0:13,0:13:33.04:0,33,1181	1/1:16,0:16:29.92:243,30,0	0/1:10,0:10:55.29:55,0,58	0/0:26,0:26:70.81:0,71,1366	0/0:19,0:18:48.28:0,48,1082	0/0:21,0:21:38.64:0,39,608	0/0:28,0:28:53.83:0,54,925	0/0:25,0:24:47.27:0,47,1387	0/0:22,0:22:28.35:0,28,907	1/1:29,0:29:22.82:418,23,0	0/1:29,0:26:83.13:389,0,83	1/1:26,1:27:9.03:209,9,0	1/1:8,0:8:20.94:168,21,0
chr10	3190727	.	TCTCTCTCTCG	T	1735.08	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=0.298;DP=677;FS=19.067;HRun=0;HaplotypeScore=165.0506;InbreedingCoeff=0.7982;MQ=68.35;MQ0=29;MQRankSum=-1.275;QD=10.71;ReadPosRankSum=2.347;VQSLOD=1.1221;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:22:8.54:68,9,0	0/0:15,0:15:29.85:0,30,485	0/0:39,0:21:18.74:0,19,182	0/0:56,0:20:7.82:0,8,149	0/0:22,0:21:36.32:0,36,555	0/0:29,0:29:36.96:0,37,479	0/0:18,0:17:29.03:0,29,487	0/0:43,0:41:85.06:0,85,610	0/0:24,0:24:32.81:0,33,572	0/0:19,0:18:43.12:0,43,1093	0/0:14,0:14:26.81:0,27,402	0/0:20,0:20:30.74:0,31,685	0/0:28,0:28:46.72:0,47,799	0/0:25,0:25:47.64:0,48,1127	1/1:4,19:23:3.01:95,3,0	0/0:14,0:14:36.05:0,36,1099	1/1:16,0:16:29.92:243,30,0	1/1:10,0:10:1.79:133,2,0	0/0:27,0:27:69.14:0,69,1189	0/0:21,0:20:53.83:0,54,1175	0/0:24,0:24:38.61:0,39,503	0/0:29,0:29:54.67:0,55,763	0/0:26,0:25:47.31:0,47,1189	0/0:22,0:22:28.31:0,28,766	1/1:28,0:28:62.91:526,63,0	0/1:27,0:24:33.12:419,0,33	1/1:2,26:28:9.03:265,9,0	1/1:8,0:8:20.94:168,21,0
chr10	3190737	.	G	GCTCT	1308.20	PASS	AB=0.887;AC=33;AF=0.611;AN=54;BaseQRankSum=-1.267;DP=714;FS=0.000;HRun=0;HaplotypeScore=126.5613;InbreedingCoeff=0.1516;MQ=59.57;MQ0=39;MQRankSum=1.697;QD=2.57;ReadPosRankSum=-0.562;VQSLOD=2.3577;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:2.87:0,3,15	0/1:13,0:13:20.98:61,0,21	0/1:31,0:13:0:0,0,0	./.	1/1:18,0:20:2.74:12,3,0	0/0:20,0:31:0.36:0,0,1	1/1:13,5:17:6.02:110,6,0	1/1:36,0:31:2.90:16,3,0	1/1:14,12:28:10.01:153,10,0	0/1:16,0:21:12.67:29,0,13	1/1:17,0:17:5.68:37,6,0	1/1:24,0:24:15.01:199,15,0	0/1:19,0:26:7.31:7,0,16	1/1:24,0:24:18.32:245,18,0	0/0:23,0:22:3:0,3,27	0/1:18,0:19:0.36:120,0,0	0/0:20,0:20:2.02:0,2,22	1/1:14,0:14:11.96:95,12,0	0/1:26,0:25:6.46:6,0,38	0/0:20,0:21:13.68:0,14,124	1/1:20,5:25:4.25:138,4,0	0/1:21,11:33:46.02:61,0,46	0/0:29,0:27:8.98:0,9,93	0/1:16,0:26:15.34:15,0,46	1/1:31,0:31:8.97:76,9,0	1/1:31,0:28:4.78:25,5,0	0/1:33,0:33:6.47:6,0,69	1/1:9,0:8:5.99:48,6,0
chr10	3191069	.	CTGCTT	C	5598.29	PASS	AB=0.549;AC=9;AF=0.161;AN=56;BaseQRankSum=13.419;DP=631;FS=0.886;HRun=0;HaplotypeScore=122.1607;InbreedingCoeff=0.8553;MQ=79.94;MQ0=0;MQRankSum=-9.821;QD=41.78;ReadPosRankSum=2.757;VQSLOD=5.0968;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,25:32:33.11:684,33,0	0/0:9,0:9:24.05:0,24,603	0/0:21,0:21:42.14:0,42,1074	0/0:16,0:16:29.21:0,29,738	0/0:23,0:23:66.17:0,66,1768	0/0:12,0:12:36.12:0,36,1035	0/0:28,0:28:84.29:0,84,2463	0/0:28,0:28:72.24:0,72,2127	0/0:26,0:26:75.24:0,75,2225	0/0:20,0:20:60.21:0,60,1824	0/0:8,0:8:15.05:0,15,449	0/0:29,0:29:72.23:0,72,2134	0/0:30,0:30:84.29:0,84,2510	0/0:31,0:31:87.29:0,87,2536	0/0:24,0:24:66.23:0,66,2020	0/0:28,0:28:81.28:0,81,2429	1/1:2,45:47:99:2353,114,0	0/0:21,0:21:60.21:0,60,1800	0/0:16,0:16:39.12:0,39,1115	0/0:13,0:13:39.13:0,39,1188	0/0:42,0:42:99:0,114,3372	0/0:18,0:18:54.14:0,54,1586	0/0:10,0:10:30.10:0,30,734	0/0:32,0:32:87.30:0,87,2571	0/0:12,0:12:36.12:0,36,1107	0/1:5,23:28:23.05:1258,0,23	1/1:4,19:23:51.17:1055,51,0	1/1:0,4:4:12.04:247,12,0
chr10	3191597	.	CCTAAAGGACCT	C	1175.52	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.740;DP=714;FS=2.384;HRun=0;HaplotypeScore=227.4614;InbreedingCoeff=0.9971;MQ=81.03;MQ0=0;MQRankSum=-5.104;QD=48.98;ReadPosRankSum=0.454;VQSLOD=3.4061;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:62,0:62:99:0,175,9354	0/0:13,0:13:36.12:0,36,1992	0/0:26,0:25:68.04:0,68,3369	0/0:21,0:22:23.39:0,23,2329	0/0:26,0:26:78.27:0,78,4108	0/0:20,0:20:57.20:0,57,3265	0/0:24,0:24:72.25:0,72,3739	0/0:35,0:35:96.33:0,96,4961	0/0:26,0:26:72.25:0,72,4027	0/0:22,0:22:63.21:0,63,3399	0/0:25,0:25:69.24:0,69,3631	0/0:29,0:29:87.30:0,87,4706	0/0:31,0:31:87.30:0,87,4810	0/0:29,0:29:84.29:0,84,4533	0/0:27,0:27:81.28:0,81,4400	0/0:21,0:21:57.19:0,57,3122	1/1:4,20:24:36.12:1270,36,0	0/0:21,0:21:60.21:0,60,3368	0/0:14,0:14:39.13:0,39,1969	0/0:18,0:18:54.19:0,54,3093	0/0:38,0:38:99:0,114,6358	0/0:31,0:31:90.31:0,90,5134	0/0:21,0:21:63.20:0,63,3316	0/0:34,0:34:99:0,102,5149	0/0:17,0:17:51.18:0,51,2856	0/0:23,0:23:63.22:0,63,3547	0/0:23,0:23:63.22:0,63,3296	0/0:11,0:11:33.09:0,33,1450
chr10	3191778	.	TGAGAGA	T	1572.22	PASS	AB=0.928;AC=32;AF=0.667;AN=48;BaseQRankSum=3.308;DP=566;FS=20.167;HRun=0;HaplotypeScore=124.6803;InbreedingCoeff=0.4579;MQ=64.28;MQ0=13;MQRankSum=-2.159;QD=4.90;ReadPosRankSum=0.232;VQSLOD=1.0189;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:2.99:0,3,24	1/1:9,3:12:9.03:181,9,0	./.	./.	0/1:22,0:23:0:0,0,0	1/1:23,0:24:6:66,6,0	1/1:12,0:15:5.05:48,5,0	./.	1/1:9,9:20:24.08:445,24,0	0/0:17,0:18:6.02:0,6,86	0/0:22,0:23:8.09:0,8,90	1/1:13,8:22:21.30:310,21,0	1/1:13,2:16:3.01:60,3,0	1/1:10,6:16:5.97:120,6,0	0/0:19,0:25:17.16:0,17,219	1/1:12,4:17:6.02:102,6,0	1/1:19,0:25:5.31:11,5,0	0/0:15,0:20:3.30:0,3,114	1/1:13,0:12:0.47:1,0,0	1/1:20,2:22:5.98:81,6,0	./.	0/1:20,2:22:0:0,0,0	0/0:20,0:23:0:0,0,0	0/1:13,0:15:0:0,0,0	1/1:11,1:13:0.88:2,1,0	0/1:20,0:21:27:27,0,230	1/1:9,0:16:15.05:209,15,0	1/1:7,0:8:3.01:42,3,0
chr10	3192356	.	G	GTCTC	4163.75	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=10.625;DP=806;FS=1.577;HRun=0;HaplotypeScore=153.4736;InbreedingCoeff=0.8217;MQ=60.92;MQ0=5;MQRankSum=-0.334;QD=25.08;ReadPosRankSum=-0.068;VQSLOD=3.6140;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,28:32:5.98:104,6,0	0/0:15,0:15:42.13:0,42,724	0/0:39,0:26:47.24:0,47,674	0/1:42,0:23:21.07:21,0,409	0/0:36,0:36:99:0,99,1718	0/0:25,0:25:69.21:0,69,1211	0/0:22,0:22:60.09:0,60,871	0/0:45,0:45:99:0,129,2141	0/0:25,0:25:32.38:0,32,1055	0/0:31,0:31:84.18:0,84,1433	0/0:31,0:31:87.28:0,87,1566	0/0:31,0:31:87.30:0,87,1591	0/0:18,0:18:53.15:0,53,812	0/0:35,0:35:99:0,102,1767	0/0:33,0:33:48.16:0,48,881	0/0:32,0:32:90.28:0,90,1580	1/1:4,22:26:3.25:587,3,0	0/0:30,0:30:66.11:0,66,1104	0/0:22,0:20:57.18:0,57,987	0/0:26,0:26:72.21:0,72,1248	0/0:40,0:40:99:0,99,1621	0/0:32,0:32:81.22:0,81,1388	0/0:24,0:24:69.22:0,69,1211	0/0:25,0:25:60.04:0,60,1057	0/0:23,0:23:45.08:0,45,754	1/1:4,26:31:84.18:1742,84,0	1/1:8,12:20:51.13:1059,51,0	1/1:2,12:14:27.08:651,27,0
chr10	3192394	.	CTCTG	C	1619.21	PASS	AB=0.979;AC=11;AF=0.196;AN=56;BaseQRankSum=11.293;DP=853;FS=13.169;HRun=0;HaplotypeScore=182.6325;InbreedingCoeff=0.5783;MQ=59.52;MQ0=9;MQRankSum=-3.487;QD=7.46;ReadPosRankSum=-6.564;VQSLOD=-0.7195;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:39,0:33:24.63:84,25,0	0/1:14,1:15:7.88:8,0,672	0/0:48,0:23:4.89:0,5,133	0/0:63,0:27:6.75:0,7,226	0/0:29,0:29:54.15:0,54,1032	0/0:24,0:24:54.12:0,54,1105	0/0:17,0:17:33.08:0,33,600	1/1:14,30:44:87.04:1036,87,0	0/0:25,0:25:72.22:0,72,1580	0/0:31,0:31:66.08:0,66,1264	0/0:28,0:28:48.89:0,49,826	0/0:32,1:33:31.80:0,32,1503	0/0:21,0:21:57.13:0,57,1162	0/0:32,0:32:75.16:0,75,1524	1/1:38,0:38:1.26:139,1,0	0/0:38,0:38:99:0,99,1933	1/1:25,0:25:30.03:447,30,0	0/1:30,0:30:12.02:12,0,96	0/0:18,0:18:38.83:0,39,545	0/0:32,0:32:69.17:0,69,1398	0/0:42,0:42:83.43:0,83,1673	0/0:41,0:41:82.26:0,82,1891	0/0:24,0:24:59.80:0,60,1008	0/0:29,0:29:69.14:0,69,1428	0/1:26,0:26:26.31:55,0,26	0/0:32,0:32:78.73:0,79,911	0/0:20,0:20:44.62:0,45,569	0/0:9,0:9:15.03:0,15,232
chr10	3192408	.	CTG	C	125.37	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=7.293;DP=840;FS=10.122;HRun=0;HaplotypeScore=155.1580;InbreedingCoeff=0.6372;MQ=58.13;MQ0=17;MQRankSum=-1.982;QD=1.96;ReadPosRankSum=0.854;VQSLOD=2.0555;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:39,0:33:0.88:1,0,19	0/0:15,0:15:37.42:0,37,744	0/0:42,0:15:17.12:0,17,393	0/0:54,0:23:24.09:0,24,613	0/0:28,0:28:78.09:0,78,1319	0/0:23,0:23:69.22:0,69,1236	0/0:19,0:19:51.17:0,51,920	0/0:46,0:45:16.58:0,17,626	0/0:27,0:27:78.27:0,78,1488	0/0:31,0:31:90.29:0,90,1569	0/0:25,0:25:71.24:0,71,1134	0/0:35,0:35:94.81:0,95,1767	0/0:24,0:24:72.25:0,72,1310	0/0:29,0:29:87.27:0,87,1569	0/0:35,0:35:71.97:0,72,713	0/0:41,0:41:99:0,120,2215	1/1:12,13:24:5.28:205,5,0	0/0:29,0:28:30.31:0,30,504	0/0:20,0:19:55.43:0,55,968	0/0:28,0:28:78.26:0,78,1446	0/0:39,0:39:99:0,105,1864	0/0:43,0:43:99:0,123,2144	0/0:23,0:23:69.24:0,69,1272	0/0:33,0:33:84.09:0,84,1531	0/0:23,0:22:36.95:0,37,439	0/0:32,0:32:89.32:0,89,1392	0/0:22,0:22:53.64:0,54,802	0/0:8,0:8:20.74:0,21,317
chr10	3192412	.	CTG	C	1338.45	PASS	AB=0.915;AC=7;AF=0.125;AN=56;BaseQRankSum=10.727;DP=837;FS=21.533;HRun=0;HaplotypeScore=146.8181;InbreedingCoeff=0.2469;MQ=58.87;MQ0=19;MQRankSum=0.660;QD=7.83;ReadPosRankSum=-0.098;VQSLOD=1.4203;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:23,18:35:45.54:592,46,0	0/0:14,0:14:28.15:0,28,583	0/0:39,0:12:7.57:0,8,161	0/0:53,0:22:31.29:0,31,367	0/0:27,0:27:69.15:0,69,1040	0/0:23,0:23:68.18:0,68,1031	0/0:19,0:19:51.07:0,51,731	0/1:45,0:43:99:417,0,281	0/0:28,0:28:81.28:0,81,1497	0/0:29,0:29:78.59:0,79,1308	0/0:24,0:24:9.19:0,9,752	0/0:35,1:36:92.01:0,92,1593	0/0:24,0:24:72.16:0,72,1110	0/0:31,0:31:77.12:0,77,1426	0/0:38,0:38:36.03:0,36,146	0/0:42,0:42:99:0,123,2003	0/1:11,15:25:2.59:238,0,3	0/0:30,0:29:18.66:0,19,138	0/0:21,1:21:16.66:0,17,682	0/0:28,0:28:81.20:0,81,1298	0/0:35,0:35:99:0,102,1603	0/0:42,0:42:97.17:0,97,1848	0/0:25,0:25:74.82:0,75,994	0/0:33,0:33:84.09:0,84,1385	0/0:24,0:22:9.98:0,10,103	0/1:29,2:31:99:102,0,301	0/1:21,0:21:99:108,0,207	0/1:7,0:7:18.34:18,0,60
chr10	3192414	.	GTCTCTC	G	2085.96	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=7.502;DP=852;FS=1.995;HRun=0;HaplotypeScore=203.3543;InbreedingCoeff=0.9350;MQ=58.79;MQ0=20;MQRankSum=-9.027;QD=22.92;ReadPosRankSum=1.953;VQSLOD=3.5435;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:35:11.30:0,11,181	0/0:14,0:14:33.08:0,33,905	0/0:38,0:11:11.58:0,12,184	0/0:57,0:23:22.16:0,22,502	0/0:26,0:26:66.11:0,66,1387	0/0:23,0:23:57.18:0,57,1563	0/0:20,0:20:51.12:0,51,1207	0/0:46,0:44:92.22:0,92,1236	0/0:28,0:28:81.26:0,81,2316	0/0:30,0:31:71.87:0,72,2194	0/0:23,0:23:47.85:0,48,1237	0/0:37,0:37:89.66:0,90,2399	0/0:24,0:24:63.19:0,63,1792	0/0:30,0:31:90.25:0,90,2381	1/1:2,37:39:63.22:1330,63,0	0/0:41,0:41:99:0,108,3150	0/0:26,0:25:7.55:0,8,407	1/1:8,20:28:13.79:320,14,0	0/0:23,0:22:51.06:0,51,1064	0/0:28,0:30:71.97:0,72,2106	0/0:39,0:39:99:0,105,2437	0/0:40,0:42:99:0,111,2933	0/0:25,0:25:48.16:0,48,1409	0/0:34,0:34:77.79:0,78,2130	1/1:5,18:21:30.10:576,30,0	0/0:29,0:31:66.77:0,67,1090	0/0:22,0:23:47.48:0,47,726	0/0:7,0:7:14.88:0,15,289
chr10	3192428	.	C	CTG	2487.99	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=10.533;DP=839;FS=20.174;HRun=0;HaplotypeScore=144.0527;InbreedingCoeff=0.9900;MQ=59.53;MQ0=23;MQRankSum=1.190;QD=25.39;ReadPosRankSum=0.768;VQSLOD=3.2217;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:37,3:34:33.35:427,33,0	0/0:13,0:13:36.09:0,36,502	0/0:36,0:15:26.17:0,26,223	0/0:45,0:17:14.13:0,14,294	0/0:28,0:28:63.12:0,63,824	0/0:22,0:22:66.15:0,66,904	0/0:21,0:21:54.09:0,54,673	0/0:46,0:43:90.37:0,90,1013	0/0:34,0:34:96.14:0,96,1309	0/0:36,0:36:99:0,108,1408	0/0:20,0:20:47.03:0,47,717	0/0:32,0:32:93.27:0,93,1335	0/0:26,0:26:75.17:0,75,1017	0/0:33,0:33:96.16:0,96,1318	0/0:40,0:40:63.33:0,63,365	0/0:41,0:41:99:0,117,1656	0/0:30,0:29:36.49:0,36,456	0/0:26,0:26:19.24:0,19,137	0/0:24,0:23:63.09:0,63,764	0/0:30,0:30:57.76:0,58,1054	0/0:41,0:41:99:0,108,1444	0/0:42,0:42:99:0,117,1664	0/0:18,0:18:54.16:0,54,777	0/0:31,0:31:78.20:0,78,1141	0/0:24,0:22:38.49:0,38,262	1/1:14,15:29:75.87:1226,76,0	1/1:3,20:23:30.53:693,31,0	1/1:1,5:6:17.99:303,18,0
chr10	3193078	.	ATCAC	A	1036.03	PASS	AB=0.594;AC=9;AF=0.161;AN=56;BaseQRankSum=2.990;DP=512;FS=10.014;HRun=0;HaplotypeScore=89.0767;InbreedingCoeff=0.8443;MQ=72.13;MQ0=3;MQRankSum=-1.279;QD=14.80;ReadPosRankSum=1.264;VQSLOD=2.5634;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:19:47.80:403,48,0	0/0:8,0:8:24.06:0,24,482	0/0:37,0:23:43.20:0,43,484	0/0:29,0:22:47.62:0,48,431	0/0:10,0:10:24.03:0,24,409	0/0:21,0:21:53.79:0,54,667	0/0:34,0:34:90.31:0,90,1013	0/0:20,0:20:53.86:0,54,476	0/0:20,0:20:58.65:0,59,871	0/0:15,0:14:42.05:0,42,528	0/0:7,0:7:18.02:0,18,269	0/0:18,0:18:48:0,48,722	0/0:15,0:15:38.99:0,39,532	0/0:28,0:28:80.95:0,81,963	0/0:23,0:23:26.86:0,27,352	0/0:30,0:30:58.50:0,58,1243	0/1:6,13:19:28.03:84,0,28	0/0:19,0:19:29.13:0,29,345	0/0:14,0:14:34.60:0,35,412	0/0:8,0:8:21.05:0,21,382	0/0:22,0:22:61.18:0,61,905	0/0:6,0:6:15.01:0,15,233	0/0:3,0:3:9:0,9,113	0/0:38,0:38:98.60:0,99,1523	0/0:17,0:17:44.84:0,45,357	1/1:11,0:11:32.98:291,33,0	1/1:15,0:15:32.15:278,32,0	1/1:6,0:6:17.96:144,18,0
chr10	3193083	.	TCA	T	632.86	PASS	AB=0.919;AC=17;AF=0.327;AN=52;BaseQRankSum=4.379;DP=572;FS=3.174;HRun=0;HaplotypeScore=78.2904;InbreedingCoeff=0.1123;MQ=65.90;MQ0=5;MQRankSum=-1.412;QD=2.12;ReadPosRankSum=0.903;VQSLOD=1.7406;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:21:6.15:28,6,0	0/0:9,0:9:14.07:0,14,168	./.	0/0:27,0:20:2.22:0,2,7	0/0:15,0:15:17.89:0,18,214	0/1:25,0:25:15.34:15,0,195	0/1:33,1:34:8.48:8,0,268	0/0:24,0:24:8.90:0,9,60	0/0:22,0:22:7.11:0,7,333	0/0:18,0:17:20.70:0,21,181	0/1:5,4:9:46.89:50,0,47	0/1:19,2:21:46.77:47,0,197	0/0:18,1:19:22.30:0,22,284	0/0:33,0:33:12.11:0,12,331	1/1:9,13:23:20.88:208,21,0	0/1:29,5:34:54.14:54,0,561	0/1:16,0:16:12.72:13,0,56	1/1:15,4:20:23.50:208,23,0	0/0:15,0:15:5.87:0,6,69	0/1:8,2:11:11.42:11,0,173	0/0:26,0:26:25.86:0,26,317	0/0:8,0:7:11.91:0,12,144	0/0:4,0:3:3:0,3,27	0/1:42,0:42:7.77:8,0,490	1/1:14,12:26:12.03:130,12,0	0/0:13,0:13:3:0,3,26	0/1:16,0:16:14.85:15,0,75	./.
chr10	3193188	.	TTCTATTTTTCAGGAAAG	T	5247.90	PASS	AB=0.522;AC=5;AF=0.089;AN=56;BaseQRankSum=9.995;DP=660;FS=0.629;HRun=0;HaplotypeScore=300.5951;InbreedingCoeff=0.7704;MQ=89.51;MQ0=0;MQRankSum=-9.391;QD=107.10;ReadPosRankSum=3.514;VQSLOD=4.2927;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,99,7395	0/0:7,0:7:21.07:0,21,1571	0/0:27,0:27:75.26:0,75,4332	0/0:27,0:27:73.13:0,73,4196	0/0:32,0:32:96.33:0,96,7252	0/0:30,0:30:87.30:0,87,6499	0/0:18,0:18:54.19:0,54,4174	0/0:28,0:28:78.26:0,78,5023	0/0:25,0:25:75.26:0,75,5406	0/0:24,0:24:69.24:0,69,5120	0/0:18,0:18:54.19:0,54,4413	0/0:24,0:24:66.22:0,66,4694	0/0:20,0:20:60.21:0,60,4868	0/0:27,0:27:81.28:0,81,5734	0/0:31,0:31:87.27:0,87,5920	0/0:26,0:26:78.27:0,78,5797	0/0:23,0:23:66.23:0,66,4833	0/0:11,0:11:24.06:0,24,1716	0/0:27,0:27:78.23:0,78,5182	0/0:31,0:31:90.31:0,90,6767	0/0:20,0:20:57.20:0,57,4061	0/0:19,0:19:54.19:0,54,4253	0/0:23,0:23:69.24:0,69,5337	0/0:31,0:31:84.29:0,84,5563	0/0:28,0:28:81.28:0,81,6605	0/1:1,11:12:99:1404,0,218	1/1:5,25:30:66.23:3099,66,0	1/1:1,6:7:15.05:745,15,0
chr10	3197714	.	TC	T	9695.42	PASS	AC=52;AF=1.000;AN=52;BaseQRankSum=0.005;DP=415;FS=0.000;HRun=2;HaplotypeScore=211.0711;InbreedingCoeff=-0.0172;MQ=31.60;MQ0=0;MQRankSum=-1.758;QD=23.36;ReadPosRankSum=0.102;VQSLOD=4.2831;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,10:11:30.10:389,30,0	1/1:1,9:10:12.04:156,12,0	./.	./.	1/1:2,24:26:45.11:580,45,0	1/1:1,14:15:33.11:427,33,0	1/1:1,11:12:24.08:311,24,0	1/1:3,13:16:39.13:504,39,0	1/1:0,15:15:27.09:350,27,0	1/1:4,19:23:57.18:738,57,0	1/1:2,27:29:27.02:347,27,0	1/1:1,16:17:45.15:583,45,0	1/1:2,20:22:45.15:581,45,0	1/1:2,22:24:42.14:544,42,0	1/1:0,14:14:27.09:350,27,0	1/1:2,12:14:21.07:272,21,0	1/1:1,5:6:12.04:156,12,0	1/1:1,8:9:15.05:194,15,0	1/1:0,8:7:21.07:272,21,0	1/1:2,33:34:54.18:698,54,0	1/1:0,5:5:6.02:77,6,0	1/1:2,28:30:48.16:621,48,0	1/1:5,19:24:29.91:422,30,0	1/1:0,11:11:0.59:35,1,0	1/1:0,11:11:21.07:272,21,0	1/1:1,10:11:30.10:389,30,0	1/1:1,11:12:18.06:233,18,0	1/1:0,5:5:15.05:195,15,0
chr10	3197788	.	T	TA	349.01	PASS	AB=0.500;AC=33;AF=0.750;AN=44;BaseQRankSum=-1.573;DP=209;FS=18.044;HRun=0;HaplotypeScore=378.5372;InbreedingCoeff=0.2433;MQ=28.77;MQ0=0;MQRankSum=-0.671;QD=1.83;ReadPosRankSum=1.332;VQSLOD=0.7972;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,2:2:2.37:8,2,0	1/1:0,5:5:5.81:20,6,0	./.	./.	1/1:0,12:12:11.88:49,12,0	1/1:0,9:9:0.66:5,1,0	0/1:0,8:8:6.68:12,0,7	0/0:0,2:2:0.67:0,1,11	1/1:0,7:7:2.19:5,2,0	0/1:0,13:13:15.17:17,0,15	1/1:0,2:2:3.22:13,3,0	0/1:0,7:7:0.48:0,0,1	1/1:0,7:8:8.23:37,8,0	0/0:0,8:8:0.64:0,1,3	1/1:0,8:8:6.85:28,7,0	1/1:0,17:17:5.90:26,6,0	./.	./.	./.	1/1:0,20:20:5.86:34,6,0	./.	1/1:0,17:17:12.48:40,12,0	1/1:0,10:10:14.89:62,15,0	0/1:0,5:5:0.86:1,0,1	1/1:0,18:18:3.23:40,3,0	0/0:0,8:8:1.94:0,2,37	1/1:0,19:19:18.34:56,18,0	0/1:0,4:4:1.64:2,0,2
chr10	3197822	.	A	AG	50.06	PASS	AB=0.833;AC=20;AF=0.400;AN=50;BaseQRankSum=3.145;DP=363;FS=0.577;HRun=0;HaplotypeScore=616.5487;InbreedingCoeff=0.2931;MQ=28.74;MQ0=0;MQRankSum=1.172;QD=0.28;ReadPosRankSum=2.253;VQSLOD=-0.5609;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:0,4:4:0.94:0,1,2	0/1:7,0:7:0.76:1,0,23	./.	./.	0/1:28,0:28:2.70:3,0,206	0/0:18,0:18:28.29:0,28,165	0/0:9,0:9:16.51:0,17,101	1/1:0,8:8:5.03:13,5,0	0/0:11,0:11:14.05:0,14,93	1/1:24,0:25:5.23:42,5,0	0/0:11,0:11:11.73:0,12,152	0/0:15,0:15:18.57:0,19,165	0/1:17,0:17:16.78:17,0,98	0/0:11,0:11:25.08:0,25,156	1/1:0,12:12:4.67:24,5,0	0/0:24,0:24:4.87:0,5,102	1/1:0,3:3:2.13:5,2,0	1/1:0,1:1:0.89:2,1,0	0/0:7,0:7:7.46:0,7,81	0/0:38,0:38:28.30:0,28,302	./.	0/0:29,0:29:3.28:0,3,228	0/1:15,0:15:11.10:11,0,100	1/1:7,0:7:0.84:6,1,0	0/1:0,20:20:11.69:13,0,12	0/1:0,14:14:9.32:9,0,30	1/1:0,23:23:13.47:46,13,0	0/0:0,5:5:1.98:0,2,6
chr10	3198517	.	A	ACCC	2272.36	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=2.590;DP=630;FS=10.696;HRun=6;HaplotypeScore=90.9444;InbreedingCoeff=0.9933;MQ=81.78;MQ0=0;MQRankSum=-4.613;QD=25.82;ReadPosRankSum=4.021;VQSLOD=0.3857;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,0:41:72.97:562,73,0	0/0:6,0:6:15.04:0,15,195	0/0:15,0:16:18.96:0,19,511	0/0:20,0:20:45.11:0,45,619	0/0:25,0:25:69.16:0,69,939	0/0:19,0:19:48.15:0,48,681	0/0:27,0:27:66.21:0,66,935	0/0:26,0:26:69.22:0,69,960	0/0:26,0:26:75.23:0,75,1046	0/0:22,0:22:57.12:0,57,756	0/0:18,0:18:45.12:0,45,620	0/0:19,0:19:51.17:0,51,717	0/0:21,0:21:60.20:0,60,849	0/0:30,0:30:84.26:0,84,1172	1/1:3,14:18:30.10:637,30,0	0/0:24,0:24:66.20:0,66,918	0/0:42,0:42:99:0,108,1496	1/1:0,10:12:30.08:597,30,0	0/0:19,0:19:54.17:0,54,745	0/0:25,0:25:72.24:0,72,1015	0/0:23,0:23:63.19:0,63,873	0/0:20,0:20:60.20:0,60,851	0/0:24,0:24:69.23:0,69,972	0/0:26,0:26:72.24:0,72,1021	1/1:2,15:17:30.10:637,30,0	0/0:25,0:25:72.24:0,72,1021	0/0:22,0:21:63.19:0,63,870	0/0:17,0:17:42.09:0,42,574
chr10	3200424	.	GCACA	G	685.80	PASS	AB=0.836;AC=9;AF=0.173;AN=52;BaseQRankSum=1.115;DP=615;FS=27.625;HRun=0;HaplotypeScore=108.3727;InbreedingCoeff=0.2741;MQ=57.40;MQ0=13;MQRankSum=-1.563;QD=4.97;ReadPosRankSum=0.984;VQSLOD=0.6406;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:24.03:0,24,379	0/1:5,1:9:37.80:38,0,68	./.	./.	0/0:22,0:21:21.07:0,21,372	0/0:21,0:21:27.09:0,27,538	0/0:27,0:27:32.54:0,33,580	0/0:18,0:17:1.25:0,1,3	0/0:10,0:18:25.19:0,25,146	0/0:22,0:22:27.08:0,27,490	0/0:18,0:19:23.80:0,24,386	0/0:11,0:23:15.05:0,15,290	0/0:16,0:25:24.06:0,24,393	0/0:15,0:20:15.03:0,15,232	0/0:33,0:33:18.03:0,18,222	0/1:16,1:19:19.75:20,0,400	0/1:26,3:28:13.55:14,0,500	0/0:11,0:10:15.05:0,15,314	0/0:12,0:13:14.78:0,15,214	0/0:12,0:14:16.74:0,17,244	0/0:35,0:36:38.85:0,39,626	0/0:16,0:16:16.62:0,17,251	0/0:17,0:18:32.83:0,33,563	0/1:22,0:25:16.87:17,0,360	0/0:35,0:34:12.04:0,12,187	0/1:16,6:22:34.75:126,0,35	1/1:14,9:23:5.78:333,6,0	1/1:2,8:10:18.06:279,18,0
chr10	3200470	.	A	ACG	685.50	PASS	AB=1.000;AC=12;AF=0.214;AN=56;BaseQRankSum=4.846;DP=656;FS=1.976;HRun=0;HaplotypeScore=82.9163;InbreedingCoeff=0.5672;MQ=63.96;MQ0=25;MQRankSum=-0.792;QD=4.18;ReadPosRankSum=-2.431;VQSLOD=2.1674;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,32:34:6.02:117,6,0	0/0:9,0:9:17.96:0,18,154	0/0:33,0:22:66:0,66,680	0/0:24,0:13:29.08:0,29,292	0/1:17,0:17:2.21:2,0,291	0/0:29,0:26:68.58:0,69,593	0/0:30,0:27:71.91:0,72,727	0/0:29,0:27:68.95:0,69,610	0/0:21,0:19:47.98:0,48,431	0/0:26,0:22:53.99:0,54,508	0/0:25,0:25:65.80:0,66,633	0/1:19,0:19:14.99:15,0,247	0/1:17,0:16:4.28:4,0,240	0/1:15,0:13:49.17:49,0,117	1/1:21,0:20:53.51:411,54,0	0/0:19,0:19:28.67:0,29,407	0/0:22,0:20:50.63:0,51,588	1/1:14,0:11:21.17:178,21,0	0/0:25,0:20:50.94:0,51,462	0/0:21,0:19:56.94:0,57,544	0/0:37,0:34:50.70:0,51,520	0/0:25,0:25:37.71:0,38,581	0/0:24,0:24:44.97:0,45,406	0/0:29,0:25:65.90:0,66,602	1/1:1,25:26:5.05:66,5,0	0/0:29,0:28:74.48:0,74,650	0/0:26,0:24:62.75:0,63,517	0/0:9,0:8:18.02:0,18,171
chr10	3201680	.	CAG	C	1185.77	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.677;DP=655;FS=2.480;HRun=0;HaplotypeScore=84.4641;InbreedingCoeff=0.9519;MQ=76.30;MQ0=0;MQRankSum=-1.514;QD=37.06;ReadPosRankSum=3.056;VQSLOD=6.1048;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,126,2254	0/0:5,0:5:15.05:0,15,280	0/0:20,0:20:51.15:0,51,873	0/0:20,0:20:57.18:0,57,986	0/0:18,0:18:51.17:0,51,954	0/0:20,0:20:57.18:0,57,1036	0/0:31,0:31:93.28:0,93,1665	0/0:28,0:28:81.22:0,81,1422	0/0:29,0:29:87.28:0,87,1579	0/0:25,0:25:72.25:0,72,1348	0/0:19,0:19:57.20:0,57,1059	0/0:32,0:32:90.28:0,90,1623	0/0:28,0:28:84.27:0,84,1518	0/0:25,0:25:75.24:0,75,1359	0/0:31,0:31:90.28:0,90,1623	0/0:23,0:23:69.24:0,69,1282	1/1:0,32:32:87.29:1281,87,0	0/0:15,0:15:45.15:0,45,841	0/0:7,0:7:21.07:0,21,385	0/0:13,0:13:36.12:0,36,674	0/0:42,0:42:99:0,120,2216	0/0:26,0:26:75.21:0,75,1358	0/0:19,0:19:57.18:0,57,1007	0/0:32,0:32:84.23:0,84,1504	0/0:30,0:30:84.29:0,84,1563	0/0:19,0:19:54.19:0,54,1003	0/0:17,0:16:51.16:0,51,909	0/0:4,0:4:12.04:0,12,224
chr10	3204524	.	TG	T	828.12	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.617;DP=743;FS=0.000;HRun=1;HaplotypeScore=70.7164;InbreedingCoeff=0.9959;MQ=88.81;MQ0=0;MQRankSum=-2.629;QD=33.12;ReadPosRankSum=0.696;VQSLOD=3.2736;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,111,1766	0/0:12,0:12:36.12:0,36,576	0/0:30,0:30:87.29:0,87,1374	0/0:22,0:23:65.90:0,66,999	0/0:29,0:29:87.28:0,87,1362	0/0:16,0:16:48.15:0,48,744	0/0:23,0:23:69.24:0,69,1103	0/0:28,0:28:81.28:0,81,1295	0/0:28,0:28:84.29:0,84,1343	0/0:28,1:29:87.30:0,87,1382	0/0:21,0:21:60.19:0,60,937	0/0:29,0:29:87.21:0,87,1356	0/0:31,0:31:93.32:0,93,1484	0/0:27,0:27:81.25:0,81,1238	0/0:32,0:32:96.33:0,96,1535	0/0:33,0:33:99:0,99,1558	1/1:0,25:25:66.22:923,66,0	0/0:26,0:26:78.27:0,78,1247	0/0:24,0:24:72.22:0,72,1106	0/0:24,0:24:72.25:0,72,1149	0/0:51,0:51:99:0,150,2327	0/0:27,0:27:81.28:0,81,1295	0/0:20,0:20:60.20:0,60,959	0/0:26,0:26:75.26:0,75,1187	0/0:22,0:22:66.19:0,66,1005	0/0:32,0:32:96.33:0,96,1535	0/0:30,0:30:90.31:0,90,1439	0/0:7,0:7:21.07:0,21,336
chr10	3207865	.	A	AACTAACC	3474.37	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=10.988;DP=702;FS=4.451;HRun=0;HaplotypeScore=176.9960;InbreedingCoeff=0.9887;MQ=86.18;MQ0=0;MQRankSum=-10.760;QD=75.53;ReadPosRankSum=-3.333;VQSLOD=3.3212;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:90.31:0,90,2294	0/0:10,0:10:30.10:0,30,779	0/0:18,0:18:42.14:0,42,989	0/0:30,0:30:79.75:0,80,1866	0/0:31,0:31:84.25:0,84,2017	0/0:30,0:30:87.30:0,87,2221	0/0:24,0:24:69.24:0,69,1722	0/0:38,0:38:99:0,105,2678	0/0:17,0:17:48.16:0,48,1244	0/0:28,0:28:84.29:0,84,2181	0/0:22,0:22:63.22:0,63,1637	0/0:31,0:31:93.29:0,93,2306	0/0:35,0:35:96.33:0,96,2455	0/0:27,0:27:78.26:0,78,1867	1/1:7,12:19:57.20:1556,57,0	0/0:30,0:29:84.29:0,84,2143	0/0:16,0:16:45.15:0,45,1099	1/1:3,1:4:12.04:381,12,0	0/0:21,0:21:60.20:0,60,1501	0/0:29,0:29:81.75:0,82,2076	0/0:23,0:23:63.18:0,63,1520	0/0:28,0:28:81.25:0,81,1985	0/0:26,0:26:69.24:0,69,1736	0/0:15,0:15:45.15:0,45,1168	1/1:18,5:23:66.22:1538,66,0	0/0:33,0:33:93.32:0,93,2278	0/0:44,0:43:99:0,126,3201	0/0:19,0:19:57.20:0,57,1431
chr10	3207869	.	G	GAC	492.64	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=7.219;DP=695;FS=0.905;HRun=0;HaplotypeScore=98.4741;InbreedingCoeff=0.9206;MQ=88.97;MQ0=0;MQRankSum=-7.182;QD=23.46;ReadPosRankSum=-0.588;VQSLOD=3.7897;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:90.31:0,90,1468	0/0:10,0:10:30.10:0,30,489	0/0:18,0:18:51.17:0,51,826	0/0:34,0:34:89.55:0,90,1357	0/0:32,0:32:90.27:0,90,1390	0/0:30,0:30:87.30:0,87,1420	0/0:27,0:27:72.23:0,72,1150	0/0:38,0:38:99:0,114,1793	0/0:19,0:19:57.19:0,57,925	0/0:29,0:29:84.29:0,84,1371	0/0:23,0:23:69.22:0,69,1099	0/0:29,0:29:87.30:0,87,1420	0/0:36,0:36:99:0,105,1704	0/0:28,0:28:81.25:0,81,1271	1/1:0,12:12:35.92:387,36,0	0/0:31,0:30:93.32:0,93,1507	0/0:15,0:15:45.13:0,45,708	1/1:2,1:3:3.01:43,3,0	0/0:21,0:21:60.20:0,60,979	0/0:28,0:28:81.27:0,81,1300	0/0:23,0:23:69.24:0,69,1119	0/0:28,0:28:75.26:0,75,1221	0/0:24,0:24:72.23:0,72,1134	0/0:17,0:17:48.16:0,48,783	1/1:1,5:6:11.54:191,12,0	0/0:32,0:32:96.31:0,96,1535	0/0:44,0:43:99:0,126,2056	0/0:20,0:20:54.66:0,55,882
chr10	3213240	.	A	AT	1552.21	PASS	AB=0.933;AC=7;AF=0.125;AN=56;BaseQRankSum=-7.860;DP=566;FS=5.836;HRun=9;HaplotypeScore=56.7589;InbreedingCoeff=0.8630;MQ=70.69;MQ0=0;MQRankSum=-2.625;QD=20.98;ReadPosRankSum=0.842;VQSLOD=4.4657;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:80.70:0,81,703	0/0:14,0:14:38.97:0,39,335	0/0:11,0:11:23.99:0,24,208	0/0:8,0:8:6.79:0,7,88	0/0:30,0:31:73.99:0,74,631	0/0:28,0:28:74.94:0,75,644	0/0:13,0:13:35.99:0,36,313	0/0:33,0:33:74.94:0,75,645	0/0:13,0:13:32.99:0,33,286	0/0:25,0:25:59.95:0,60,517	0/0:29,0:29:74.93:0,75,647	0/0:24,0:24:68.96:0,69,595	0/0:18,0:18:47.99:0,48,417	0/0:9,0:9:20.99:0,21,182	0/0:21,0:21:56.99:0,57,495	0/0:18,0:18:41.98:0,42,365	0/0:2,0:24:42.55:0,43,125	0/0:7,0:6:12:0,12,104	0/0:14,0:14:35.99:0,36,313	0/0:29,0:29:47.80:0,48,643	0/1:13,1:14:0.22:0,0,223	0/0:24,0:24:62.99:0,63,547	0/0:23,0:23:68.95:0,69,592	0/0:16,1:17:11.78:0,12,328	0/0:29,0:29:77.97:0,78,677	1/1:4,13:17:39.11:431,39,0	1/1:1,26:27:75.20:830,75,0	1/1:2,14:16:42.73:433,43,0
chr10	3213751	.	AC	A	450.51	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.613;DP=683;FS=2.383;HRun=1;HaplotypeScore=82.1695;InbreedingCoeff=0.9049;MQ=85.70;MQ0=0;MQRankSum=-1.950;QD=32.18;ReadPosRankSum=-0.571;VQSLOD=3.2288;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:49:99:0,150,2352	0/0:10,0:10:30.10:0,30,480	0/0:23,0:23:63.17:0,63,956	0/0:23,0:23:60.04:0,60,901	0/0:35,0:35:99:0,102,1604	0/0:27,0:27:81.26:0,81,1271	0/0:25,0:25:75.24:0,75,1175	0/0:26,0:26:78.26:0,78,1225	0/0:22,0:22:66.21:0,66,1029	0/0:26,0:26:78.27:0,78,1246	0/0:16,0:16:48.16:0,48,761	0/0:21,0:21:63.21:0,63,1007	0/0:32,0:32:93.32:0,93,1485	0/0:32,0:32:96.31:0,96,1507	0/0:40,0:40:99:0,117,1843	0/0:19,0:19:57.19:0,57,909	1/1:0,14:14:39.13:545,39,0	0/0:15,0:15:45.15:0,45,719	0/0:17,0:17:51.16:0,51,787	0/0:29,0:29:87.28:0,87,1364	0/0:27,0:27:75.26:0,75,1196	0/0:28,0:28:84.29:0,84,1343	0/0:20,0:20:60.20:0,60,959	0/0:22,0:22:66.23:0,66,1055	0/0:20,0:20:60.20:0,60,959	0/0:30,0:30:90.28:0,90,1374	0/0:32,0:31:93.32:0,93,1486	0/0:2,0:2:6.02:0,6,96
chr10	3214007	.	C	CTTGATCTGT	2019.83	PASS	AB=0.655;AC=1;AF=0.018;AN=56;BaseQRankSum=1.307;DP=683;FS=2.065;HRun=0;HaplotypeScore=189.4715;InbreedingCoeff=-0.0183;MQ=84.34;MQ0=0;MQRankSum=-5.925;QD=106.31;ReadPosRankSum=1.920;VQSLOD=4.0523;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,102,2950	0/0:8,0:8:24.08:0,24,737	0/0:23,0:23:54.25:0,54,1811	0/0:20,0:20:51.12:0,51,1283	0/0:32,0:32:96.33:0,96,2990	0/0:23,0:23:69.24:0,69,2159	0/0:23,0:23:69.22:0,69,2036	0/0:38,0:38:99:0,108,3035	0/0:20,0:20:60.21:0,60,1850	0/0:34,0:34:90.30:0,90,2601	0/0:15,0:15:42.14:0,42,1281	0/0:21,0:21:63.22:0,63,1992	0/0:25,0:25:75.26:0,75,2282	0/0:27,0:27:81.28:0,81,2489	0/0:27,0:27:81.26:0,81,2490	0/0:28,0:28:81.28:0,81,2376	0/1:9,9:19:46.70:2094,0,47	0/0:27,0:27:75.26:0,75,2261	0/0:27,0:27:75.26:0,75,2316	0/0:33,0:33:96.33:0,96,3014	0/0:20,0:20:60.18:0,60,1777	0/0:27,0:27:78.25:0,78,2351	0/0:25,0:25:75.24:0,75,2255	0/0:14,0:14:42.14:0,42,1195	0/0:20,0:20:57.20:0,57,1757	0/0:27,0:27:81.26:0,81,2378	0/0:37,0:37:99:0,111,3457	0/0:8,0:8:24.08:0,24,759
chr10	3214671	.	GC	G	639.75	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.354;DP=460;FS=5.577;HRun=7;HaplotypeScore=45.3380;InbreedingCoeff=0.9845;MQ=87.76;MQ0=0;MQRankSum=-4.091;QD=25.59;ReadPosRankSum=1.426;VQSLOD=4.1661;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:48.15:0,48,604	0/0:8,0:8:21.07:0,21,264	0/0:19,0:19:48.06:0,48,567	0/0:18,0:17:35.62:0,36,377	0/0:20,0:20:57.18:0,57,716	0/0:19,0:19:57.17:0,57,705	0/0:16,0:16:45.14:0,45,563	0/0:31,0:31:81.25:0,81,1001	0/0:9,0:9:27.09:0,27,340	0/0:26,0:26:69.19:0,69,843	0/0:27,0:27:72.22:0,72,895	0/0:7,0:7:18.06:0,18,226	0/0:12,0:12:36.12:0,36,453	0/0:14,0:14:36.12:0,36,453	0/0:15,0:15:45.14:0,45,566	0/0:10,0:10:30.10:0,30,377	1/1:0,25:25:72.16:735,72,0	0/0:15,0:15:36.12:0,36,453	0/0:17,0:17:48.15:0,48,602	0/0:18,0:18:54.17:0,54,678	0/0:11,0:11:33.08:0,33,388	0/0:10,0:10:27.09:0,27,340	0/0:14,0:14:39.12:0,39,480	0/0:11,0:11:33.11:0,33,415	0/0:17,0:17:48.15:0,48,604	0/0:15,0:15:42.11:0,42,503	0/0:23,0:23:63.19:0,63,779	0/0:16,0:16:48.15:0,48,603
chr10	3215006	.	CCA	C	417.56	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=3.312;DP=543;FS=0.000;HRun=0;HaplotypeScore=75.1470;InbreedingCoeff=0.8497;MQ=78.72;MQ0=1;MQRankSum=-2.367;QD=10.99;ReadPosRankSum=-1.010;VQSLOD=3.1067;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:75.09:0,75,1082	0/0:8,0:8:23.83:0,24,332	0/0:24,0:23:61.75:0,62,870	0/1:15,0:14:1.85:2,0,301	0/0:29,0:29:77.96:0,78,1191	0/0:20,0:20:54.10:0,54,823	0/0:19,0:19:48.07:0,48,682	0/0:31,0:31:78.76:0,79,1166	0/0:15,0:15:44.82:0,45,720	0/0:16,0:16:48.12:0,48,662	0/0:25,0:25:62.77:0,63,1035	0/0:20,0:20:60.17:0,60,950	0/0:23,0:23:66.20:0,66,1090	0/0:18,0:18:50.84:0,51,679	0/0:21,0:21:63.18:0,63,914	0/0:25,0:25:72.21:0,72,1144	0/0:13,0:13:39.08:0,39,565	0/0:25,0:25:75.18:0,75,1099	0/0:18,0:18:54.15:0,54,790	0/0:26,0:26:75:0,75,1152	0/0:22,0:22:60.12:0,60,870	0/0:19,0:19:51.13:0,51,776	0/0:11,0:11:30.07:0,30,438	0/0:20,0:20:60.10:0,60,902	0/0:27,0:27:78.13:0,78,1121	1/1:1,4:5:15.03:194,15,0	1/1:4,10:14:20.86:269,21,0	1/1:0,4:4:6.02:85,6,0
chr10	3215007	.	CA	C	158.02	PASS	AB=0.889;AC=7;AF=0.125;AN=56;BaseQRankSum=6.909;DP=540;FS=1.609;HRun=1;HaplotypeScore=65.2098;InbreedingCoeff=0.7885;MQ=78.79;MQ0=1;MQRankSum=-2.091;QD=4.16;ReadPosRankSum=-2.124;VQSLOD=-0.5049;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:57.09:0,57,832	0/0:8,0:8:18.10:0,18,245	0/0:24,0:23:49.46:0,49,646	0/1:14,2:15:25.13:25,0,223	0/0:28,0:28:72.34:0,72,915	0/0:19,0:19:54.09:0,54,653	0/0:19,0:19:48.04:0,48,558	0/0:31,0:31:79.01:0,79,943	0/0:15,0:15:39.91:0,40,550	0/0:16,0:16:48.11:0,48,549	0/0:25,0:25:43.74:0,44,764	0/0:21,0:21:60.14:0,60,745	0/0:23,0:23:66.20:0,66,858	0/0:17,0:17:46.46:0,46,537	0/0:21,0:21:62.73:0,63,701	0/0:25,0:25:72.16:0,72,890	0/0:13,0:13:39.07:0,39,449	0/0:25,0:25:75.13:0,75,853	0/0:19,0:19:57.14:0,57,678	0/0:25,0:25:70.05:0,70,904	0/0:22,0:22:59.84:0,60,684	0/0:18,0:18:51.11:0,51,610	0/0:11,0:11:29.94:0,30,331	0/0:21,0:21:58.67:0,59,711	0/0:28,0:28:77.79:0,78,875	1/1:4,1:5:14.81:101,15,0	1/1:10,3:13:20.52:132,21,0	1/1:4,0:4:5.91:39,6,0
chr10	3215524	.	CTG	C	136.16	PASS	AB=1.000;AC=8;AF=0.154;AN=52;BaseQRankSum=2.442;DP=560;FS=11.225;HRun=0;HaplotypeScore=100.9430;InbreedingCoeff=0.0997;MQ=44.62;MQ0=39;MQRankSum=1.639;QD=1.06;ReadPosRankSum=1.945;VQSLOD=0.8954;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:26:14.24:103,14,0	0/0:7,0:7:4.49:0,4,28	./.	./.	0/0:17,0:17:16.48:0,16,139	0/0:31,0:24:26.92:0,27,212	0/0:22,0:17:14.91:0,15,115	0/0:30,0:28:18.51:0,19,236	0/1:15,0:13:24.49:24,0,35	0/0:20,0:19:1.86:0,2,176	0/1:16,0:15:11.60:12,0,59	0/1:23,0:21:70.02:70,0,76	0/0:23,0:22:26.98:0,27,211	0/1:15,0:14:3.65:4,0,111	0/0:37,0:36:47.25:0,47,354	0/0:25,0:24:13.88:0,14,256	0/1:18,0:15:35.05:46,0,35	0/0:17,0:17:0.08:0,0,120	0/0:16,0:12:4.43:0,4,131	0/0:15,7:22:20.83:0,21,158	0/0:44,0:28:11.09:0,11,218	0/0:21,2:23:18.41:0,18,141	0/1:15,0:14:0:0,0,0	0/0:29,0:26:23.36:0,23,204	0/0:19,0:18:14.01:0,14,103	0/0:16,0:15:16.22:0,16,275	0/0:13,0:11:9.66:0,10,95	0/0:13,0:11:3.21:0,3,162
chr10	3215654	.	G	GTC	3877.14	PASS	AB=0.836;AC=13;AF=0.232;AN=56;BaseQRankSum=-4.302;DP=691;FS=6.559;HRun=0;HaplotypeScore=110.6559;InbreedingCoeff=0.8042;MQ=56.81;MQ0=30;MQRankSum=-0.182;QD=18.46;ReadPosRankSum=2.388;VQSLOD=3.8282;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:28:23.06:0,23,123	0/0:9,0:9:21.07:0,21,279	0/0:31,0:11:19.87:0,20,237	0/1:57,1:32:5.74:6,0,509	0/0:13,0:13:27.09:0,27,357	0/0:19,0:19:51.17:0,51,672	0/0:15,0:13:24.08:0,24,318	0/0:42,0:39:99:0,105,1365	0/0:24,0:22:45.15:0,45,598	0/0:27,0:27:74.98:0,75,963	0/0:14,0:14:27.09:0,27,359	0/0:23,0:22:51.15:0,51,661	0/0:29,0:29:69.21:0,69,897	0/0:26,0:26:66.22:0,66,874	1/1:3,35:38:54.18:935,54,0	0/0:20,0:20:54.14:0,54,668	0/1:14,0:12:0.40:15,0,0	1/1:8,9:15:36.10:548,36,0	0/0:18,0:11:21.05:0,21,250	0/0:16,0:16:41.99:0,42,538	0/0:42,0:41:96.25:0,96,1227	0/0:17,0:17:48.16:0,48,637	0/0:21,0:17:32.94:0,33,423	0/0:46,0:43:99:0,102,1337	1/1:4,8:12:12.04:208,12,0	0/1:6,25:31:1.76:1030,0,2	1/1:3,20:22:48.13:825,48,0	1/1:8,6:13:18.06:312,18,0
chr10	3215658	.	CTCTG	C	557.76	PASS	AB=0.991;AC=10;AF=0.179;AN=56;BaseQRankSum=5.028;DP=691;FS=3.950;HRun=0;HaplotypeScore=136.4534;InbreedingCoeff=-0.0062;MQ=55.53;MQ0=35;MQRankSum=1.889;QD=2.39;ReadPosRankSum=-2.848;VQSLOD=1.1987;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:28:40.72:44,0,41	0/0:8,0:8:21.07:0,21,565	0/0:31,0:10:4.90:0,5,398	0/1:60,0:27:10.18:10,0,818	0/0:12,0:12:32.90:0,33,782	0/0:19,0:19:51.17:0,51,1160	0/0:16,0:14:24.08:0,24,543	0/0:40,0:37:99:0,108,2301	0/0:24,0:22:48.16:0,48,1218	0/0:28,0:28:78.24:0,78,1759	0/0:16,0:16:27.09:0,27,710	0/0:24,0:23:51.65:0,52,1246	0/0:27,0:27:69.24:0,69,1623	0/0:27,0:27:66.23:0,66,1662	0/1:37,0:36:78.18:299,0,78	0/0:19,0:19:54.17:0,54,1265	1/1:4,8:10:7.60:82,8,0	0/1:17,1:16:24.08:52,0,24	0/0:17,0:11:30.06:0,30,526	0/0:19,0:18:42.62:0,43,1083	0/0:43,0:42:99:0,99,2181	0/0:17,0:17:48.16:0,48,1151	0/0:23,0:18:33.11:0,33,869	0/0:47,0:44:99:0,105,2527	0/1:12,0:12:31:44,0,31	0/1:28,0:28:99:115,0,510	0/1:24,0:23:46.75:47,0,236	0/1:12,0:11:9.98:10,0,151
chr10	3215686	.	GTCTCTCTC	G	311.77	PASS	AB=0.847;AC=6;AF=0.107;AN=56;BaseQRankSum=3.569;DP=701;FS=9.410;HRun=0;HaplotypeScore=166.7529;InbreedingCoeff=0.5536;MQ=43.70;MQ0=60;MQRankSum=-2.035;QD=4.33;ReadPosRankSum=0.442;VQSLOD=2.2590;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:27:16.18:0,16,259	0/0:9,0:9:18.05:0,18,445	0/0:41,0:7:18.06:0,18,551	0/0:58,0:9:3.01:0,3,43	0/0:25,0:23:30.06:0,30,609	0/0:17,0:17:30.57:0,31,791	0/0:21,0:14:9:0,9,149	0/0:46,0:41:78.26:0,78,1810	0/0:30,0:27:30.05:0,30,800	0/0:23,0:26:63.11:0,63,1343	0/0:16,0:16:15.05:0,15,392	0/0:21,0:20:32.60:0,33,836	0/0:17,0:16:20.94:0,21,593	0/0:22,0:22:29.82:0,30,760	0/1:18,8:25:34.62:88,0,35	0/0:18,0:18:30.10:0,30,951	0/1:12,0:11:2.08:29,0,2	1/1:13,5:15:11.98:243,12,0	0/0:22,0:13:25.90:0,26,745	0/0:25,0:24:24.15:0,24,474	0/0:35,0:32:30:0,30,803	0/0:21,0:19:21.04:0,21,548	0/0:27,0:21:27.01:0,27,711	0/0:41,0:38:63.20:0,63,2052	1/1:9,6:15:3.01:73,3,0	0/0:30,0:27:55.61:0,56,756	0/0:16,0:15:17.68:0,18,209	0/0:13,0:10:30.01:0,30,377
chr10	3215706	.	CTCTG	C	889.61	PASS	AB=0.986;AC=19;AF=0.339;AN=56;BaseQRankSum=7.622;DP=691;FS=7.508;HRun=0;HaplotypeScore=132.1490;InbreedingCoeff=0.3514;MQ=41.15;MQ0=68;MQRankSum=-2.829;QD=2.98;ReadPosRankSum=-1.314;VQSLOD=1.7332;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:21:8.98:0,9,73	0/1:10,0:10:22.24:22,0,88	0/0:28,0:6:14.96:0,15,131	0/0:34,0:3:2.98:0,3,21	0/1:26,0:23:11.67:12,0,125	0/0:21,0:18:7.03:0,7,199	0/0:27,0:18:10.34:0,10,76	0/1:44,0:41:22.83:23,0,418	0/0:26,0:22:38.12:0,38,372	0/1:28,0:26:69.87:70,0,253	0/0:16,0:16:14.95:0,15,118	0/0:25,0:22:37.49:0,37,283	0/0:19,0:16:6.92:0,7,245	0/0:22,0:22:32.07:0,32,305	1/1:27,0:25:22.33:152,22,0	0/0:18,0:18:4.95:0,5,354	1/1:12,0:11:5.25:52,5,0	1/1:20,0:17:20.04:126,20,0	0/1:22,0:14:1.79:2,0,196	0/1:24,0:22:10.63:11,0,80	0/0:42,0:28:35.03:0,35,262	0/0:19,0:17:14.98:0,15,125	0/0:25,0:21:21.65:0,22,236	0/0:44,0:41:28.99:0,29,607	1/1:22,0:22:0.11:6,0,0	1/1:29,1:26:33.33:399,33,0	1/1:11,1:10:17.28:108,17,0	0/1:16,2:12:5.42:84,0,5
chr10	3215708	.	CTG	C	504.76	PASS	AB=0.994;AC=21;AF=0.420;AN=50;BaseQRankSum=2.985;DP=693;FS=21.147;HRun=0;HaplotypeScore=124.8657;InbreedingCoeff=-0.1494;MQ=41.02;MQ0=67;MQRankSum=-0.451;QD=1.30;ReadPosRankSum=0.619;VQSLOD=1.1872;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:22:0.47:0,0,1	0/1:10,0:10:16.41:35,0,16	./.	./.	0/1:25,0:23:22.43:32,0,22	0/1:22,0:18:10.50:10,0,67	0/0:29,0:19:4.42:0,4,47	0/0:44,0:41:2.86:0,3,16	0/1:27,1:23:21.58:22,0,97	0/1:27,0:25:69.10:69,0,84	0/0:17,0:17:5.99:0,6,50	0/1:25,0:22:16.69:17,0,83	0/1:20,0:17:7.35:7,0,114	0/0:20,0:20:16.10:0,16,129	1/1:25,1:24:23.92:166,24,0	0/1:18,0:18:38.79:39,0,77	1/1:16,0:13:3.43:49,3,0	0/1:20,0:17:6.80:68,0,7	0/1:21,0:13:7.31:7,0,70	0/1:24,0:22:12.90:21,0,13	0/0:47,0:32:14.10:0,14,93	./.	0/0:25,0:22:9.17:0,9,91	0/1:45,0:42:19.05:19,0,142	0/0:20,0:22:0.94:0,1,2	1/1:29,0:25:10.80:55,11,0	1/1:8,0:8:5.47:28,5,0	0/1:17,0:14:6.60:7,0,7
chr10	3216721	.	CAGATGGATGGATGGAT	C	5783.16	PASS	AB=0.526;AC=7;AF=0.125;AN=56;BaseQRankSum=10.134;DP=818;FS=5.009;HRun=0;HaplotypeScore=305.6307;InbreedingCoeff=0.7276;MQ=57.67;MQ0=21;MQRankSum=-8.500;QD=57.26;ReadPosRankSum=2.301;VQSLOD=4.0579;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:3,33:36:15.69:1039,16,0	0/0:8,0:8:24.06:0,24,1035	0/0:36,0:14:0.73:0,1,1189	0/0:36,0:16:44.57:0,45,1581	0/0:30,0:30:87.27:0,87,5460	0/0:24,0:24:72.22:0,72,4345	0/0:27,0:27:81.16:0,81,4028	0/0:35,0:34:96.23:0,96,2038	0/0:29,0:29:87.24:0,87,4744	0/0:34,0:34:99:0,99,6498	0/0:14,0:14:42.12:0,42,2374	0/0:40,0:40:99:0,120,6812	0/0:39,0:39:99:0,117,7055	0/0:28,0:28:84.10:0,84,4750	0/0:0,0:25:36.12:0,36,1074	0/0:29,0:29:87.01:0,87,4436	0/0:0,0:34:31.30:0,31,339	0/0:0,0:16:15.05:0,15,501	0/0:30,0:25:72.16:0,72,3952	0/0:29,0:29:86.84:0,87,4576	0/0:60,0:58:99:0,165,9522	0/0:29,0:29:87.21:0,87,4682	0/0:28,0:28:84.20:0,84,4510	0/0:31,0:31:75.20:0,75,4690	0/0:0,0:23:24.08:0,24,657	0/1:3,27:30:99:2413,0,434	1/1:0,29:29:48.16:2109,48,0	1/1:0,6:6:6.02:222,6,0
chr10	3216722	.	AGATG	A	2308	PASS	AB=0.991;AC=17;AF=0.304;AN=56;BaseQRankSum=13.766;DP=812;FS=2.562;HRun=0;HaplotypeScore=150.4272;InbreedingCoeff=0.6917;MQ=57.59;MQ0=21;MQRankSum=-7.103;QD=8.52;ReadPosRankSum=2.627;VQSLOD=2.5975;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:36,0:36:2.44:152,2,0	0/0:8,0:8:15.05:0,15,341	0/1:35,0:13:10.22:10,0,382	0/0:38,0:16:17.99:0,18,522	0/0:27,1:28:23.76:0,24,1541	0/0:24,0:24:54.16:0,54,1249	0/0:26,0:26:51.18:0,51,1191	1/1:23,12:34:39.07:491,39,0	0/0:29,0:29:63.18:0,63,1356	0/0:36,0:36:84.75:0,85,1975	0/0:14,0:14:27.09:0,27,649	0/0:40,0:40:84.28:0,84,1942	0/0:39,0:39:90.30:0,90,2074	0/0:26,1:27:11.73:0,12,1323	1/1:25,0:25:33.10:420,33,0	0/0:28,0:28:14.73:0,15,1305	0/1:35,0:35:4.66:199,0,5	1/1:16,0:16:15.05:196,15,0	0/0:29,0:24:48.16:0,48,1159	0/0:29,0:29:57.18:0,57,1289	0/0:60,0:58:99:0,117,2702	0/0:29,0:29:11.24:0,11,1206	0/0:27,0:27:60.19:0,60,1385	0/0:30,0:30:70.38:0,70,1411	1/1:23,0:23:24.07:279,24,0	0/1:30,0:30:99:336,0,112	1/1:29,0:29:47.31:385,47,0	1/1:6,0:6:3:28,3,0
chr10	3217727	.	C	CATCT	4232	PASS	AB=1.000;AC=15;AF=0.288;AN=52;BaseQRankSum=-2.445;DP=611;FS=11.013;HRun=0;HaplotypeScore=103.8655;InbreedingCoeff=0.8228;MQ=65.18;MQ0=4;MQRankSum=-0.002;QD=21.48;ReadPosRankSum=-0.388;VQSLOD=3.8251;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:14,12:28:19.79:372,20,0	0/0:8,0:8:18.06:0,18,270	./.	./.	0/1:15,0:15:51.64:52,0,210	1/1:19,21:38:36.12:828,36,0	0/0:16,0:16:24.06:0,24,345	0/0:40,0:39:5.93:0,6,40	0/0:7,0:15:15.02:0,15,140	0/0:22,0:22:36.12:0,36,545	0/0:25,0:25:42.12:0,42,603	0/0:20,0:21:30.09:0,30,441	0/0:25,0:25:45.15:0,45,689	0/0:25,0:25:48.16:0,48,736	0/0:22,0:22:42.14:0,42,640	0/0:22,0:22:39.13:0,39,593	0/0:11,0:25:17.93:0,18,166	1/1:12,13:28:14.70:705,15,0	0/0:18,0:17:21.07:0,21,321	0/0:27,0:27:36.12:0,36,540	1/1:5,7:12:21.07:491,21,0	0/0:10,0:10:3.01:0,3,39	0/0:29,0:29:51.16:0,51,753	0/0:13,0:13:12.04:0,12,180	0/0:25,0:25:39.13:0,39,600	1/1:9,11:20:36.12:806,36,0	1/1:13,17:32:36.12:838,36,0	1/1:11,11:22:6.02:140,6,0
chr10	3219736	.	C	CGTGT	1180.04	PASS	AB=0.975;AC=13;AF=0.250;AN=52;BaseQRankSum=1.379;DP=423;FS=11.636;HRun=0;HaplotypeScore=85.4062;InbreedingCoeff=0.3661;MQ=54.34;MQ0=11;MQRankSum=-0.795;QD=7.07;ReadPosRankSum=-0.110;VQSLOD=0.6231;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:8.98:0,9,109	0/0:2,0:2:3.01:0,3,37	./.	./.	0/0:17,0:17:21.07:0,21,272	0/0:18,0:18:18.05:0,18,228	0/0:14,0:15:8.75:0,9,66	1/1:27,0:25:3.86:23,4,0	0/0:9,0:9:11.83:0,12,152	0/0:16,0:16:5.93:0,6,73	0/0:13,0:13:9:0,9,108	0/0:14,0:16:24.05:0,24,260	0/0:14,0:14:17.61:0,18,215	0/0:12,0:13:14.96:0,15,148	0/0:6,0:6:6.01:0,6,65	0/1:6,0:6:0:0,0,0	1/1:28,0:26:34.03:497,34,0	0/1:30,0:30:1.05:1,0,239	0/0:16,0:16:8.78:0,9,103	0/1:21,0:21:65.85:66,0,191	0/0:33,0:33:7.31:0,7,80	0/1:6,0:7:6.50:6,0,33	0/0:12,0:12:9.03:0,9,114	0/0:12,0:11:6.02:0,6,82	0/0:19,0:15:5.95:0,6,55	1/1:25,0:24:10.94:454,11,0	1/1:7,4:11:3.01:71,3,0	0/1:12,0:11:17.57:205,0,18
chr10	3219985	.	A	AC	2524.15	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-11.040;DP=604;FS=3.773;HRun=4;HaplotypeScore=59.8931;InbreedingCoeff=0.9974;MQ=85.46;MQ0=0;MQRankSum=-1.385;QD=35.06;ReadPosRankSum=2.208;VQSLOD=4.2849;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,123,1394	0/0:9,0:9:27.05:0,27,293	0/0:17,0:17:38.64:0,39,468	0/0:22,0:22:63.14:0,63,684	0/0:25,0:25:66.17:0,66,739	0/0:14,0:14:42.12:0,42,476	0/0:34,0:34:93.27:0,93,1055	0/0:22,0:22:60.14:0,60,667	0/0:18,0:18:48.13:0,48,540	0/0:14,0:14:39.11:0,39,440	0/0:9,0:9:24.07:0,24,272	0/0:26,0:26:69.19:0,69,783	0/0:17,0:17:51.15:0,51,578	0/0:28,0:28:84.24:0,84,950	1/1:0,31:31:87.29:1190,87,0	0/0:24,0:24:66.19:0,66,749	0/0:17,0:17:48.14:0,48,544	1/1:1,21:22:63.21:862,63,0	0/0:20,0:20:54.14:0,54,603	0/0:13,0:13:39.11:0,39,442	0/0:42,0:42:99:0,108,1224	0/0:17,0:17:48.14:0,48,544	0/0:21,0:21:60.17:0,60,681	0/0:19,0:19:54.11:0,54,598	1/1:1,18:19:45.15:615,45,0	0/0:22,0:22:60.16:0,60,672	0/0:24,0:23:66.19:0,66,748	0/0:11,0:11:21.06:0,21,238
chr10	3221116	.	C	CA	2276.89	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-10.301;DP=573;FS=16.603;HRun=10;HaplotypeScore=61.1839;InbreedingCoeff=0.9446;MQ=81.76;MQ0=0;MQRankSum=-1.509;QD=19.46;ReadPosRankSum=-0.318;VQSLOD=2.5982;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:23:64.96:0,65,523	0/0:14,1:16:6:0,6,245	0/0:15,0:16:25.99:0,26,203	0/0:15,0:18:7.45:0,7,91	0/0:23,0:23:50.89:0,51,419	0/0:18,1:19:21.94:0,22,387	0/0:10,0:10:20.96:0,21,172	0/0:32,0:32:56.84:0,57,465	0/0:26,0:26:65.83:0,66,542	0/0:22,0:22:47.93:0,48,394	0/0:13,0:14:28.99:0,29,228	0/0:24,1:26:32.97:0,33,467	0/0:25,0:25:71.92:0,72,591	0/0:15,0:15:32.92:0,33,270	1/1:1,21:21:60.15:640,60,0	0/0:19,0:19:41.91:0,42,345	0/0:22,0:22:50.93:0,51,419	1/1:2,10:12:24.02:243,24,0	0/0:23,1:27:46.02:0,46,548	0/0:15,0:15:35.95:0,36,296	0/0:17,0:18:43.97:0,44,351	0/0:21,0:22:55.95:0,56,449	0/0:22,0:22:47.89:0,48,391	0/0:26,0:26:62.88:0,63,517	1/1:3,12:17:21.39:207,21,0	1/1:5,20:26:7.75:477,8,0	1/1:5,24:29:57.13:605,57,0	1/1:1,10:11:27.07:288,27,0
chr10	3221357	.	G	GT	5535.56	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-14.030;DP=676;FS=7.593;HRun=3;HaplotypeScore=61.5700;InbreedingCoeff=0.9969;MQ=89.44;MQ0=0;MQRankSum=-4.342;QD=36.18;ReadPosRankSum=3.602;VQSLOD=5.3457;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:38:99:0,105,1197	0/0:14,0:14:42.13:0,42,503	0/0:30,0:31:77.23:0,77,917	0/0:20,0:20:58.34:0,58,635	0/0:38,0:38:99:0,105,1258	0/0:28,0:28:78.22:0,78,923	0/0:16,0:16:45.08:0,45,493	0/0:23,0:23:63.16:0,63,724	0/0:18,0:18:54.17:0,54,648	0/0:26,0:26:75.19:0,75,883	0/0:25,0:25:75.22:0,75,887	0/0:25,0:25:60.18:0,60,719	0/0:20,0:20:60.18:0,60,718	0/0:21,0:21:60.16:0,60,705	1/1:0,24:23:66.22:924,66,0	0/0:23,0:23:63.19:0,63,756	1/1:1,16:17:39.09:524,39,0	1/1:2,20:22:44.22:757,44,0	0/0:25,0:24:60.11:0,60,637	0/0:35,0:35:99:0,102,1223	0/0:27,0:27:75.20:0,75,886	0/0:28,0:28:84.26:0,84,1005	0/0:19,0:19:57.16:0,57,671	0/0:22,0:22:66.19:0,66,780	1/1:3,23:26:69.23:966,69,0	1/1:5,27:32:15.28:1062,15,0	1/1:1,23:24:69.23:966,69,0	1/1:0,8:8:24.08:336,24,0
chr10	3223833	.	A	ACC	840.71	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=1.053;DP=551;FS=6.084;HRun=2;HaplotypeScore=71.4722;InbreedingCoeff=0.6926;MQ=48.24;MQ0=30;MQRankSum=-0.872;QD=8.41;ReadPosRankSum=-1.378;VQSLOD=-0.0652;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:2,23:26:9.03:142,9,0	0/0:11,0:11:2.22:0,2,120	0/0:16,0:5:11.94:0,12,96	0/0:29,0:8:14.61:0,15,120	0/0:26,0:24:23.89:0,24,186	0/0:28,0:28:29.96:0,30,248	0/0:23,0:19:14.96:0,15,124	0/0:30,0:26:77.96:0,78,668	0/0:15,0:14:13.85:0,14,206	0/0:21,0:19:51.06:0,51,495	0/0:11,0:9:11.69:0,12,88	0/0:18,0:17:23.87:0,24,184	0/0:18,0:18:23.42:0,23,160	0/0:10,0:8:8.88:0,9,69	0/0:24,0:22:20.89:0,21,177	0/0:17,0:14:17.83:0,18,128	0/1:26,0:24:48.20:48,0,185	0/0:12,0:12:0.05:0,0,95	0/0:24,0:22:53.99:0,54,484	0/0:10,0:9:14.89:0,15,109	0/0:35,0:31:59.74:0,60,459	0/0:19,0:18:20.89:0,21,160	0/0:15,0:14:18.12:0,18,123	0/0:20,0:13:8.52:0,9,146	0/0:19,0:16:20.91:0,21,164	1/1:2,13:15:41.95:399,42,0	1/1:25,0:24:40.69:308,41,0	1/1:7,0:7:14.66:101,15,0
chr10	3223834	.	C	CCT	522.52	PASS	AB=1.000;AC=28;AF=0.636;AN=44;BaseQRankSum=0.980;DP=590;FS=2.246;HRun=0;HaplotypeScore=91.8914;InbreedingCoeff=0.4102;MQ=45.54;MQ0=31;MQRankSum=1.613;QD=1.51;ReadPosRankSum=-1.802;VQSLOD=1.4706;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:26:8.98:80,9,0	1/1:12,0:12:4.26:39,4,0	./.	0/1:29,0:8:0:0,0,0	./.	0/0:31,0:31:0.14:0,0,0	0/0:22,0:19:2.84:0,3,14	./.	1/1:18,3:20:2.40:42,2,0	0/0:22,0:20:5.38:0,5,40	0/1:11,0:9:0.14:0,0,0	0/1:21,0:20:0:0,0,0	0/1:19,0:19:0:0,0,0	0/1:10,0:8:0:0,0,0	0/1:28,0:25:0:0,0,0	1/1:20,0:17:3.01:37,3,0	1/1:16,10:24:12.04:171,12,0	1/1:12,0:11:5.98:59,6,0	0/0:23,0:20:2.96:0,3,20	0/1:12,0:11:0:0,0,0	./.	./.	./.	1/1:19,1:13:2.99:35,3,0	0/1:20,0:17:0:0,0,0	1/1:19,0:18:9.43:62,9,0	1/1:25,0:24:5.74:25,6,0	1/1:11,0:10:9.35:73,9,0
chr10	3224774	.	TGATA	T	895.80	PASS	AB=0.919;AC=16;AF=0.400;AN=40;BaseQRankSum=0.201;DP=441;FS=5.411;HRun=0;HaplotypeScore=93.0362;InbreedingCoeff=0.4608;MQ=32.02;MQ0=101;MQRankSum=0.587;QD=5.18;ReadPosRankSum=0.732;VQSLOD=1.6532;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:11:6.02:0,6,136	1/1:3,4:7:6.02:89,6,0	./.	./.	./.	0/0:14,8:19:0:0,0,0	1/1:17,0:12:0.47:1,0,0	./.	1/1:18,7:21:12.04:168,12,0	0/0:30,0:24:12.04:0,12,275	0/0:8,0:8:0:0,0,0	0/1:21,5:23:99:113,0,253	1/1:20,12:28:12.04:178,12,0	0/1:18,0:16:77.34:77,0,119	0/0:15,0:12:2.90:0,3,16	1/1:16,2:17:18.05:235,18,0	./.	0/0:9,0:9:2.56:0,3,11	./.	1/1:6,3:8:6.02:89,6,0	0/0:15,0:8:12.04:0,12,275	1/1:15,3:14:6.02:81,6,0	0/0:11,0:7:0.47:0,0,1	./.	./.	0/0:1,0:19:25.32:0,25,395	0/0:1,0:5:6.02:0,6,103	0/0:0,0:3:9.03:0,9,151
chr10	3224855	.	A	AGATG	1573.36	PASS	AB=0.894;AC=14;AF=0.280;AN=50;BaseQRankSum=1.109;DP=603;FS=3.153;HRun=0;HaplotypeScore=121.9368;InbreedingCoeff=0.4764;MQ=43.62;MQ0=35;MQRankSum=-1.725;QD=8.99;ReadPosRankSum=-2.317;VQSLOD=2.5187;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:25:8.98:55,0,9	0/0:10,0:10:3.01:0,3,46	./.	./.	0/0:13,0:12:9.02:0,9,120	0/0:21,0:21:14.66:0,15,209	0/0:24,0:24:32.68:0,33,478	./.	0/0:40,0:40:33.97:0,34,677	0/0:16,0:15:15.04:0,15,202	0/0:11,0:11:8.92:0,9,112	0/0:32,0:31:42.02:0,42,585	0/0:31,0:31:47.63:0,48,702	0/0:23,0:22:11.86:0,12,164	1/1:31,0:27:1.96:107,2,0	0/0:41,0:41:21.61:0,22,704	0/1:12,17:27:10.93:396,0,11	0/1:16,0:14:11.14:102,0,11	0/0:15,0:12:18.06:0,18,275	0/0:12,0:12:30.10:0,30,446	0/0:26,0:25:38.98:0,39,501	1/1:11,1:11:9.03:170,9,0	0/0:13,0:12:15.04:0,15,203	0/0:23,0:19:31.97:0,32,439	1/1:11,0:10:5.42:27,5,0	1/1:15,4:18:27.07:472,27,0	0/1:17,1:15:29.84:218,0,30	1/1:11,1:11:9.03:188,9,0
chr10	3225137	.	G	GCA	1999.60	PASS	AB=0.849;AC=18;AF=0.346;AN=52;BaseQRankSum=-2.927;DP=629;FS=2.610;HRun=0;HaplotypeScore=97.2250;InbreedingCoeff=0.1574;MQ=64.76;MQ0=13;MQRankSum=0.654;QD=5.99;ReadPosRankSum=-0.172;VQSLOD=3.2147;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:32,0:32:11.73:87,12,0	0/0:10,0:10:18.05:0,18,198	./.	./.	0/0:18,0:17:18.02:0,18,186	0/0:15,0:17:17.87:0,18,179	0/0:28,0:28:8.43:0,8,222	1/1:26,0:26:7.22:63,7,0	0/0:17,0:20:32.79:0,33,344	0/0:25,0:27:32.75:0,33,322	0/0:9,0:10:16.21:0,16,143	0/1:22,0:23:0.95:1,0,188	0/0:24,0:24:33.09:0,33,364	0/1:20,1:21:15.01:15,0,256	0/1:15,22:39:11.93:666,0,12	0/0:23,0:23:44.62:0,45,453	0/1:16,8:25:42.03:246,0,42	0/1:11,7:20:42.03:246,0,42	0/1:23,0:22:38.60:39,0,55	0/1:15,0:14:31.35:31,0,87	0/1:34,1:35:3.33:3,0,337	0/0:13,0:12:8.86:0,9,80	0/0:16,0:13:11.89:0,12,120	0/0:21,0:25:20.72:0,21,189	0/1:6,5:12:18:164,0,18	1/1:11,9:22:19.73:316,20,0	1/1:11,1:22:15.01:150,15,0	0/1:13,2:14:18:139,0,18
chr10	3225164	.	C	CACACACACACAT	770.56	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=3.055;DP=692;FS=4.397;HRun=0;HaplotypeScore=224.2061;InbreedingCoeff=0.1834;MQ=54.88;MQ0=21;MQRankSum=-4.230;QD=5.10;ReadPosRankSum=-0.557;VQSLOD=2.5501;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:13,17:36:12.04:681,12,0	0/0:13,0:13:29.86:0,30,682	0/0:29,0:11:21.01:0,21,198	0/0:34,0:19:38.83:0,39,335	0/0:20,0:18:27.97:0,28,463	0/0:19,0:19:51.02:0,51,822	0/1:25,0:25:32.86:33,0,768	0/1:26,0:26:78.12:78,0,364	0/0:27,0:27:59.88:0,60,1257	0/0:38,0:38:77.98:0,78,1383	0/0:12,0:12:21:0,21,394	0/0:22,0:22:30.53:0,31,764	0/0:17,0:17:36.11:0,36,1136	0/0:25,0:25:53.92:0,54,1039	0/0:39,0:39:81.06:0,81,1181	0/0:24,0:23:59.94:0,60,1342	0/0:34,0:33:57:0,57,774	0/0:25,0:25:53.07:0,53,725	0/1:27,0:26:2.07:2,0,452	0/0:17,0:16:10.39:0,10,435	0/0:43,0:42:92.86:0,93,1374	0/0:19,0:17:29.98:0,30,472	0/0:17,0:15:17.91:0,18,388	0/0:21,0:21:41.88:0,42,657	0/0:16,0:15:23.55:0,24,306	0/1:24,0:23:67.67:68,0,317	0/0:30,0:30:18.08:0,18,313	0/1:12,0:11:36.45:36,0,195
chr10	3225323	.	CAGGAGTCAG	C	781.50	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.212;DP=623;FS=2.755;HRun=0;HaplotypeScore=169.9647;InbreedingCoeff=0.8474;MQ=82.30;MQ0=0;MQRankSum=-5.318;QD=43.42;ReadPosRankSum=0.557;VQSLOD=3.6738;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,15:18:30.10:876,30,0	0/0:7,0:7:21.07:0,21,1030	0/0:18,0:18:52.42:0,52,2155	0/0:20,0:20:54.18:0,54,2138	0/0:16,0:16:45.15:0,45,2107	0/0:20,0:20:57.20:0,57,2771	0/0:27,0:27:81.26:0,81,3596	0/0:32,0:32:96.33:0,96,4228	0/0:23,0:23:66.23:0,66,3147	0/0:20,0:20:60.21:0,60,2691	0/0:21,0:21:63.22:0,63,2824	0/0:26,0:26:75.26:0,75,3592	0/0:23,0:23:69.24:0,69,3225	0/0:15,0:15:42.14:0,42,2035	0/0:31,0:31:87.30:0,87,3977	0/0:18,0:18:54.19:0,54,2535	0/0:31,0:31:87.21:0,87,3821	0/0:24,0:24:72.25:0,72,3406	0/0:15,0:14:39.13:0,39,1727	0/0:23,0:23:66.22:0,66,2902	0/0:50,0:50:99:0,141,6546	0/0:29,0:29:87.28:0,87,3825	0/0:23,0:23:69.24:0,69,3239	0/0:32,0:32:96.33:0,96,4613	0/0:18,0:18:54.19:0,54,2427	0/0:23,0:23:66.22:0,66,2798	0/0:19,0:19:51.18:0,51,2474	0/0:1,0:1:3.01:0,3,47
chr10	3225457	.	TAC	T	905.29	PASS	AB=0.739;AC=6;AF=0.107;AN=56;BaseQRankSum=4.458;DP=490;FS=0.662;HRun=0;HaplotypeScore=81.5867;InbreedingCoeff=0.6250;MQ=63.62;MQ0=4;MQRankSum=0.204;QD=12.93;ReadPosRankSum=0.371;VQSLOD=2.9574;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:15:9:0,9,80	0/0:8,0:8:18.02:0,18,237	0/0:31,0:14:3.83:0,4,20	0/0:23,0:13:17.85:0,18,153	0/0:28,0:28:48.14:0,48,716	0/0:16,0:16:41.92:0,42,553	0/0:21,0:22:39.12:0,39,597	0/1:15,5:20:0.03:159,0,0	0/0:9,0:9:21.07:0,21,333	0/0:17,0:17:36.12:0,36,551	0/0:18,1:18:11.76:0,12,524	0/0:13,0:13:30.01:0,30,421	0/0:19,0:19:45.15:0,45,713	0/0:12,0:12:30.09:0,30,448	0/0:12,0:17:29.01:0,29,235	0/0:13,0:14:36.09:0,36,523	0/0:16,0:20:17.97:0,18,152	0/0:4,0:13:29.93:0,30,252	0/0:19,0:18:18.02:0,18,217	0/0:22,0:22:44.87:0,45,648	0/0:14,0:14:36.11:0,36,544	0/0:16,0:16:36.10:0,36,525	0/0:19,0:20:3.53:0,4,473	0/0:18,0:18:29.05:0,29,528	0/0:5,0:11:20.99:0,21,182	0/1:11,10:21:83.01:304,0,83	1/1:11,1:12:14.95:149,15,0	1/1:6,11:17:41.04:427,41,0
chr10	3225485	.	CTG	C	281.16	PASS	AB=0.913;AC=13;AF=0.250;AN=52;BaseQRankSum=1.440;DP=650;FS=0.000;HRun=0;HaplotypeScore=94.8809;InbreedingCoeff=-0.0326;MQ=49.50;MQ0=38;MQRankSum=-0.113;QD=1.33;ReadPosRankSum=-1.131;VQSLOD=1.6604;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:15:11.96:0,12,100	0/1:7,0:8:8.09:8,0,39	./.	./.	0/0:24,2:26:0.32:0,0,329	0/1:17,3:20:5.35:5,0,290	1/1:19,7:24:8.02:77,8,0	0/0:30,0:27:12.34:0,12,101	0/1:13,2:15:49.79:50,0,118	1/1:17,4:18:3.01:32,3,0	0/1:14,3:16:31.50:64,0,31	0/0:16,1:17:0.80:0,1,144	0/1:20,1:21:38.16:38,0,190	0/0:14,0:14:17.38:0,17,265	0/0:8,0:12:11.04:0,11,85	0/0:19,0:18:24.06:0,24,317	0/0:10,0:21:17.92:0,18,143	0/0:17,0:19:20.92:0,21,181	0/0:25,0:20:6.02:0,6,89	0/1:17,4:21:99:103,0,147	0/1:22,0:21:14.26:14,0,144	0/1:12,1:13:11.01:26,0,11	0/0:13,0:13:6.01:0,6,69	0/0:23,0:22:27.06:0,27,359	0/0:11,0:14:15:0,15,145	0/1:23,0:25:4.39:4,0,250	0/0:10,0:10:18:0,18,188	0/0:21,0:24:32.97:0,33,333
chr10	3225641	.	AG	A	258.71	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.163;DP=648;FS=18.525;HRun=6;HaplotypeScore=91.2496;InbreedingCoeff=0.9019;MQ=72.72;MQ0=14;MQRankSum=0.088;QD=9.95;ReadPosRankSum=-3.887;VQSLOD=-0.1186;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:90.27:0,90,1153	0/0:9,0:9:27.09:0,27,351	0/0:49,0:31:46.06:0,46,645	0/0:47,0:29:23.95:0,24,509	0/0:14,0:14:36.11:0,36,457	0/0:25,0:25:57.18:0,57,746	0/0:23,0:23:66.17:0,66,827	1/1:12,14:21:33.06:353,33,0	0/0:22,0:22:63.20:0,63,829	0/0:26,0:26:69.22:0,69,897	0/0:17,0:17:38.86:0,39,508	0/0:13,0:12:36.09:0,36,444	0/0:22,1:22:54.65:0,55,704	0/0:22,0:22:63.13:0,63,777	0/0:19,0:18:48.13:0,48,601	0/0:26,0:26:75.23:0,75,967	0/0:28,0:28:81.25:0,81,1045	0/0:17,0:17:45.10:0,45,572	0/0:20,0:17:48.14:0,48,602	0/0:19,0:19:57.16:0,57,716	0/0:37,0:37:99:0,108,1400	0/0:24,0:24:66.21:0,66,849	0/0:12,0:12:32.70:0,33,416	0/0:29,0:29:81.19:0,81,1012	0/0:25,0:25:72.23:0,72,931	0/0:16,0:16:42.03:0,42,506	0/0:18,0:18:42.09:0,42,531	0/0:2,0:2:6.02:0,6,79
chr10	3225877	.	T	TA	213.73	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.875;DP=628;FS=0.000;HRun=1;HaplotypeScore=69.9585;InbreedingCoeff=0.8005;MQ=88.05;MQ0=0;MQRankSum=-4.196;QD=10.18;ReadPosRankSum=1.603;VQSLOD=1.4393;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,14:21:4.89:293,5,0	0/0:8,0:8:24.08:0,24,329	0/0:25,0:25:69.09:0,69,882	0/0:20,0:20:56.94:0,57,689	0/0:25,0:25:69.21:0,69,926	0/0:31,0:31:93.28:0,93,1276	0/0:27,0:27:78.21:0,78,1024	0/0:34,0:34:99:0,102,1396	0/0:21,0:21:63.21:0,63,878	0/0:32,0:32:96.32:0,96,1329	0/0:18,0:18:54.16:0,54,734	0/0:18,0:18:54.15:0,54,718	0/0:23,0:23:69.22:0,69,942	0/0:19,0:19:57.18:0,57,777	0/0:21,0:21:63.19:0,63,846	0/0:23,0:23:69.22:0,69,947	0/0:26,0:26:72.24:0,72,991	0/0:19,0:18:54.16:0,54,730	0/0:19,0:19:51.12:0,51,660	0/0:30,0:30:90.23:0,90,1181	0/0:32,0:32:96.31:0,96,1316	0/0:21,0:21:60.18:0,60,808	0/0:19,0:19:54.14:0,54,712	0/0:32,0:32:93.27:0,93,1241	0/0:16,0:16:39.12:0,39,529	0/0:27,0:27:78.22:0,78,1063	0/0:18,0:17:51.15:0,51,681	0/0:3,0:3:9.01:0,9,107
chr10	3225878	.	T	TA	190.88	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.299;DP=624;FS=2.235;HRun=0;HaplotypeScore=69.9281;InbreedingCoeff=0.8963;MQ=88.23;MQ0=0;MQRankSum=-3.571;QD=9.09;ReadPosRankSum=1.379;VQSLOD=3.3284;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,14:21:18.39:282,18,0	0/0:8,0:8:24.08:0,24,336	0/0:24,0:24:66.13:0,66,866	0/0:21,0:21:56.95:0,57,717	0/0:23,0:23:66.21:0,66,906	0/0:31,0:31:90.30:0,90,1258	0/0:27,0:27:78.21:0,78,1036	0/0:34,0:34:99:0,102,1426	0/0:21,0:21:63.21:0,63,881	0/0:32,0:32:96.32:0,96,1342	0/0:17,0:17:51.17:0,51,713	0/0:18,0:18:54.15:0,54,733	0/0:25,0:25:69.22:0,69,949	0/0:20,0:20:57.18:0,57,780	0/0:19,0:19:57.19:0,57,797	0/0:23,0:23:69.22:0,69,945	0/0:26,0:26:75.24:0,75,1031	0/0:18,0:17:51.17:0,51,710	0/0:18,0:18:51.16:0,51,684	0/0:30,0:30:87.23:0,87,1160	0/0:32,0:32:93.31:0,93,1299	0/0:23,0:23:63.18:0,63,836	0/0:19,0:19:54.14:0,54,718	0/0:31,0:31:90.27:0,90,1224	0/0:16,0:16:48.06:0,48,597	0/0:27,0:27:78.22:0,78,1069	0/0:18,0:17:51.16:0,51,693	0/0:2,0:2:6.02:0,6,84
chr10	3225940	.	TG	T	830.44	PASS	AB=0.896;AC=9;AF=0.161;AN=56;BaseQRankSum=7.641;DP=608;FS=16.258;HRun=10;HaplotypeScore=79.4114;InbreedingCoeff=0.3180;MQ=82.84;MQ0=0;MQRankSum=-3.404;QD=5.89;ReadPosRankSum=3.067;VQSLOD=0.4824;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,0:28:44.62:131,45,0	0/1:7,2:10:28.21:28,0,156	0/1:19,2:21:4.32:4,0,348	0/0:18,0:18:17.29:0,17,228	0/0:18,1:19:0.99:0,1,222	0/0:20,0:20:8.87:0,9,269	0/0:24,1:25:40.06:0,40,635	0/0:10,0:16:11.80:0,12,83	0/0:25,1:26:30.91:0,31,569	0/0:28,0:28:48.10:0,48,509	0/1:11,1:12:14.02:14,0,87	0/0:32,0:32:57.03:0,57,577	0/0:25,0:25:42.09:0,42,448	0/0:27,1:28:28.08:0,28,530	0/0:11,0:27:34.56:0,35,245	0/0:19,0:19:48.10:0,48,513	1/1:2,30:34:91.06:767,91,0	0/0:7,0:16:25.74:0,26,163	0/0:18,0:18:39.08:0,39,415	0/0:19,0:19:20.23:0,20,181	0/0:24,2:26:23.31:0,23,466	0/0:21,0:21:27.04:0,27,281	0/0:14,0:14:15.03:0,15,157	0/0:34,0:34:78.20:0,78,856	0/0:8,0:16:14.50:0,14,96	0/0:20,0:20:24.05:0,24,258	0/1:22,3:25:24.05:24,0,427	0/1:10,1:11:8.06:8,0,120
chr10	3225973	.	AGTGT	A	1261.63	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.991;DP=608;FS=1.677;HRun=0;HaplotypeScore=105.5237;InbreedingCoeff=0.9973;MQ=90.17;MQ0=0;MQRankSum=-7.561;QD=46.73;ReadPosRankSum=0.734;VQSLOD=4.4476;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,27:27:72.20:1357,72,0	0/0:10,0:10:27.09:0,27,740	0/0:23,0:23:63.22:0,63,1713	0/0:25,0:25:69.24:0,69,1770	0/0:17,0:17:48.16:0,48,1314	0/0:25,0:25:72.25:0,72,1962	0/0:20,0:20:60.21:0,60,1643	0/0:25,0:25:69.24:0,69,1880	0/0:28,0:28:81.28:0,81,2208	0/0:26,0:26:75.26:0,75,2035	0/0:11,0:11:30.10:0,30,805	0/0:18,0:18:54.19:0,54,1479	0/0:30,0:30:81.28:0,81,2176	0/0:23,0:23:69.24:0,69,1880	0/0:26,0:26:51.18:0,51,1396	0/0:24,0:24:69.24:0,69,1890	0/0:29,0:29:81.28:0,81,2219	0/0:14,0:14:39.13:0,39,1064	0/0:21,0:21:54.19:0,54,1464	0/0:15,0:15:42.14:0,42,1150	0/0:33,0:33:90.31:0,90,2465	0/0:18,0:18:51.18:0,51,1392	0/0:9,0:9:27.09:0,27,740	0/0:34,0:34:99:0,102,2758	0/0:19,0:19:48.16:0,48,1315	0/0:18,0:18:51.18:0,51,1393	0/0:24,0:24:69.21:0,69,1825	0/0:16,0:16:48.16:0,48,1276
chr10	3226219	.	AACACAC	A	360.65	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.227;DP=769;FS=0.000;HRun=0;HaplotypeScore=165.0053;InbreedingCoeff=0.7472;MQ=61.47;MQ0=6;MQRankSum=-2.850;QD=10.61;ReadPosRankSum=-0.635;VQSLOD=2.7079;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:7,27:34:26.96:454,27,0	0/0:12,0:12:36.12:0,36,1211	0/0:35,0:11:16.58:0,17,616	0/0:37,0:21:20.32:0,20,420	0/0:22,0:22:63.22:0,63,1929	0/0:30,0:30:72.24:0,72,2226	0/0:28,0:28:66.23:0,66,2070	0/0:43,0:42:96.32:0,96,2277	0/0:24,0:26:63.22:0,63,1922	0/0:30,0:31:81.28:0,81,2546	0/0:24,0:24:60.21:0,60,1902	0/0:32,0:35:87.28:0,87,2750	0/0:21,0:23:57.19:0,57,1780	0/0:30,0:31:81.26:0,81,2512	0/0:30,0:30:14.72:0,15,331	0/0:34,0:34:90.31:0,90,2744	0/0:21,0:21:54.18:0,54,1770	0/0:9,0:9:2.51:0,3,53	0/0:18,0:18:42.14:0,42,1374	0/0:28,0:29:69.22:0,69,2091	0/0:38,0:39:99:0,108,3442	0/0:29,0:29:80.90:0,81,2631	0/0:19,0:19:48.16:0,48,1558	0/0:30,0:31:84.27:0,84,2589	0/0:24,0:24:6.91:0,7,156	0/0:38,0:37:96.32:0,96,2106	0/0:26,0:26:20.44:0,20,424	0/0:11,0:11:15.05:0,15,383
chr10	3227261	.	TC	T	1027.56	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=5.787;DP=509;FS=0.000;HRun=9;HaplotypeScore=63.2338;InbreedingCoeff=0.8254;MQ=77.57;MQ0=0;MQRankSum=-0.617;QD=16.57;ReadPosRankSum=-1.802;VQSLOD=3.2926;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,1:35:37.77:0,38,833	0/0:9,0:9:15.04:0,15,173	0/0:25,0:22:41.75:0,42,424	0/0:20,1:20:8.83:0,9,305	0/0:16,1:17:16.34:0,16,417	0/0:10,0:10:18.05:0,18,208	0/0:21,1:22:27.14:0,27,542	1/1:7,22:29:63.01:573,63,0	0/0:14,0:14:33.02:0,33,355	0/0:18,0:18:32.86:0,33,360	0/0:14,0:14:36.10:0,36,404	0/0:22,1:23:35.70:0,36,640	0/0:21,0:21:57.17:0,57,658	0/0:17,1:18:20.63:0,21,455	0/0:16,0:16:39.10:0,39,433	0/0:13,0:13:36.09:0,36,406	0/0:24,0:23:66.20:0,66,761	0/0:16,0:16:45.13:0,45,519	0/0:13,1:14:2.63:0,3,284	0/0:11,0:11:24.07:0,24,274	0/0:31,2:33:23.36:0,23,743	0/0:14,1:15:2.55:0,3,249	0/0:11,0:11:18.03:0,18,189	0/0:36,0:36:96.24:0,96,1074	0/0:10,0:10:24.01:0,24,256	1/1:1,10:11:27.01:247,27,0	1/1:4,15:19:36.01:329,36,0	1/1:1,2:3:3:27,3,0
chr10	3228027	.	CA	C	1069.15	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=7.748;DP=496;FS=13.561;HRun=9;HaplotypeScore=49.6904;InbreedingCoeff=0.8662;MQ=74.25;MQ0=1;MQRankSum=-1.465;QD=20.96;ReadPosRankSum=0.434;VQSLOD=3.0757;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:64.74:0,65,731	0/0:3,0:3:6.02:0,6,69	0/0:14,0:13:32.46:0,32,318	0/0:13,0:12:1.77:0,2,213	0/0:22,0:22:63.19:0,63,727	0/0:17,0:17:48.14:0,48,553	0/0:16,0:16:42.07:0,42,459	0/0:26,0:26:66.17:0,66,741	0/0:11,0:11:27.08:0,27,312	0/0:30,0:30:81.24:0,81,935	0/0:15,0:15:36.11:0,36,416	0/0:10,0:10:27.08:0,27,312	0/0:23,0:23:66.20:0,66,762	0/0:24,0:24:63.19:0,63,726	0/0:25,0:23:66.18:0,66,745	0/0:14,0:14:39.12:0,39,450	0/0:17,0:17:50.88:0,51,557	0/0:26,0:26:69.21:0,69,796	0/0:12,0:12:33.09:0,33,372	0/0:21,0:21:51.15:0,51,589	0/0:15,0:15:38.91:0,39,429	0/0:11,0:11:30.09:0,30,346	0/0:25,0:25:63.19:0,63,727	0/0:10,0:10:27.04:0,27,297	0/0:19,0:19:45.13:0,45,519	1/1:1,13:14:7.40:322,7,0	1/1:1,25:26:71.07:635,71,0	1/1:0,10:10:27.01:247,27,0
chr10	3228686	.	A	ACCACCT	11548.86	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-9.706;DP=756;FS=9.868;HRun=0;HaplotypeScore=153.5656;InbreedingCoeff=0.9891;MQ=75.42;MQ0=1;MQRankSum=-14.014;QD=46.95;ReadPosRankSum=-3.130;VQSLOD=3.8421;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:20,27:50:50.63:1800,51,0	0/0:7,0:7:18.04:0,18,296	0/0:33,0:30:48.06:0,48,961	0/0:32,0:30:59.34:0,59,1107	0/0:18,0:18:51.17:0,51,1047	0/0:33,0:33:81.26:0,81,1704	0/0:30,0:30:72.21:0,72,1473	1/1:28,12:44:59.81:1381,60,0	0/0:32,0:32:66.17:0,66,1319	0/0:31,0:31:84.28:0,84,1706	0/0:22,0:22:45.15:0,45,904	0/0:18,0:18:45.15:0,45,930	0/0:25,0:25:57.20:0,57,1209	0/0:33,0:33:72.25:0,72,1507	1/1:5,26:35:60:1963,60,0	0/0:23,0:23:51.16:0,51,1047	1/1:11,15:26:39.13:1303,39,0	1/1:1,4:6:8.99:301,9,0	0/0:20,0:20:36.12:0,36,752	0/0:20,0:20:48.16:0,48,1015	0/0:45,0:45:99:0,108,2190	0/0:27,0:27:66.18:0,66,1293	0/0:17,0:17:45.15:0,45,938	0/0:44,0:44:99:0,114,2282	1/1:7,14:23:39.13:1281,39,0	1/1:9,11:22:36.09:1066,36,0	1/1:9,16:27:54.19:1778,54,0	1/1:6,5:12:24.08:675,24,0
chr10	3229072	.	GA	G	2151.51	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=7.151;DP=619;FS=18.035;HRun=10;HaplotypeScore=78.6214;InbreedingCoeff=0.9849;MQ=74.03;MQ0=1;MQRankSum=-4.241;QD=18.23;ReadPosRankSum=1.921;VQSLOD=2.7928;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,23:24:50.91:433,51,0	0/0:10,0:10:21.05:0,21,228	0/0:25,1:24:20.96:0,21,362	0/0:23,0:21:31.09:0,31,293	0/0:29,0:29:81.19:0,81,877	0/0:21,1:22:37.12:0,37,631	0/0:15,0:15:45.12:0,45,498	0/0:29,0:29:69.13:0,69,719	0/0:29,1:31:23.44:0,23,673	0/0:29,0:29:68.53:0,69,835	0/0:22,0:23:46.91:0,47,554	0/0:16,0:17:44.93:0,45,462	0/0:33,0:33:84.19:0,84,908	0/0:23,0:23:57.12:0,57,608	1/1:4,21:25:53.98:469,54,0	0/0:19,0:20:59.98:0,60,637	1/1:4,22:26:35.19:436,35,0	1/1:2,19:21:50.99:442,51,0	0/0:17,0:17:42.09:0,42,449	0/0:18,0:18:48.11:0,48,522	0/0:12,2:14:10.02:0,10,322	0/0:14,0:14:30.07:0,30,324	0/0:24,0:24:60.16:0,60,663	0/0:9,0:9:24.06:0,24,265	1/1:1,21:22:62.99:547,63,0	0/0:30,0:31:58.94:0,59,768	0/0:36,0:35:91.59:0,92,1055	0/0:8,0:8:21.04:0,21,222
chr10	3229817	.	C	CA	2887.13	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-7.307;DP=592;FS=0.917;HRun=6;HaplotypeScore=58.4040;InbreedingCoeff=0.9958;MQ=64.58;MQ0=0;MQRankSum=2.563;QD=31.04;ReadPosRankSum=2.363;VQSLOD=4.2846;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:66.14:0,66,671	0/0:10,0:10:30.07:0,30,306	0/0:22,0:21:44.58:0,45,442	0/0:11,0:11:23.99:0,24,228	0/0:28,0:28:72.14:0,72,727	0/0:21,0:21:54.08:0,54,536	0/0:10,0:10:30.07:0,30,306	0/0:26,0:26:63.13:0,63,642	0/0:11,0:11:33.07:0,33,336	0/0:22,0:22:63.13:0,63,638	0/0:21,0:21:54.12:0,54,550	0/0:22,0:22:66.13:0,66,666	0/0:30,0:30:84.18:0,84,856	0/0:15,0:15:36.06:0,36,361	0/0:20,0:20:60.12:0,60,604	0/0:22,0:22:66.11:0,66,659	0/0:24,0:24:57.07:0,57,567	0/0:13,0:13:36.04:0,36,355	0/0:18,0:18:51.10:0,51,514	0/0:28,0:28:78.17:0,78,796	0/0:13,0:13:36.08:0,36,367	0/0:15,0:15:42.09:0,42,428	0/0:29,0:29:75.16:0,75,765	0/0:12,0:12:18.04:0,18,184	0/0:27,0:27:75.17:0,75,765	1/1:2,22:24:66.18:803,66,0	1/1:3,37:40:99:1283,102,0	1/1:1,28:29:75.24:944,75,0
chr10	3231314	.	C	CGT	1495.05	PASS	AB=0.750;AC=7;AF=0.130;AN=54;BaseQRankSum=7.119;DP=425;FS=0.524;HRun=0;HaplotypeScore=96.6331;InbreedingCoeff=0.7474;MQ=53.39;MQ0=5;MQRankSum=-4.794;QD=20.20;ReadPosRankSum=1.392;VQSLOD=3.9521;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:23.06:0,23,174	0/0:5,0:5:12.04:0,12,162	./.	0/0:4,0:2:2.97:0,3,20	0/0:17,0:17:45.01:0,45,595	0/0:24,0:24:39.68:0,40,534	0/0:24,0:24:60.66:0,61,857	0/1:14,7:21:99:161,0,196	0/0:8,0:8:12.93:0,13,181	0/0:19,0:19:45.11:0,45,644	0/0:12,0:12:23.09:0,23,303	0/0:10,0:10:17.17:0,17,173	0/0:11,0:11:29.82:0,30,395	0/0:16,0:16:39.08:0,39,483	1/1:8,0:8:12.04:165,12,0	0/0:6,0:6:17.42:0,17,213	0/0:18,0:17:16.07:0,16,92	1/1:24,0:24:51.09:767,51,0	0/0:13,0:13:36:0,36,455	0/0:8,0:8:17.93:0,18,237	0/0:23,0:22:39.97:0,40,525	0/0:10,0:10:23.86:0,24,283	0/0:15,0:14:32.92:0,33,433	0/0:22,0:21:48.15:0,48,683	1/1:20,0:21:45.02:545,45,0	0/0:26,0:26:49.43:0,49,307	0/0:15,0:15:14.64:0,15,78	0/0:20,0:20:19.05:0,19,118
chr10	3231315	.	GCACA	G	1763.57	PASS	AB=0.890;AC=18;AF=0.360;AN=50;BaseQRankSum=9.781;DP=424;FS=4.689;HRun=0;HaplotypeScore=105.8595;InbreedingCoeff=0.5711;MQ=53.45;MQ0=5;MQRankSum=-7.083;QD=8.95;ReadPosRankSum=2.139;VQSLOD=2.6307;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:14,1:21:10.11:187,10,0	0/0:5,0:5:6.02:0,6,141	./.	./.	0/0:18,0:18:30.10:0,30,665	0/0:18,0:23:29.80:0,30,564	0/1:23,0:23:18.69:19,0,388	./.	0/0:9,0:9:11.07:0,11,194	0/0:20,0:20:35.92:0,36,551	0/0:13,0:13:14.79:0,15,253	0/0:10,0:10:17.83:0,18,268	0/0:11,0:11:21.07:0,21,476	0/0:14,0:16:26.52:0,27,474	1/1:4,0:8:2.98:21,3,0	0/1:5,1:6:37.80:38,0,114	1/1:13,0:17:12:106,12,0	1/1:17,0:24:18.02:170,18,0	0/0:14,0:15:11.78:0,12,219	0/0:8,0:8:6:0,6,211	0/0:22,0:22:24.06:0,24,448	0/0:11,0:11:11.79:0,12,339	0/1:16,0:15:4.96:5,0,434	0/0:16,0:21:35.55:0,36,590	1/1:12,0:20:17.48:142,17,0	0/1:15,10:26:48.87:441,0,49	1/1:4,10:15:27.08:397,27,0	1/1:6,14:20:27.09:418,27,0
chr10	3231869	.	T	TA	4209.22	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-13.292;DP=552;FS=4.528;HRun=8;HaplotypeScore=52.6820;InbreedingCoeff=0.9572;MQ=67.89;MQ0=0;MQRankSum=-1.104;QD=29.44;ReadPosRankSum=1.225;VQSLOD=3.8492;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,17:19:29.47:532,29,0	0/0:7,0:7:20.99:0,21,186	0/0:16,0:15:5.32:0,5,218	0/0:12,0:12:17.99:0,18,163	0/0:36,0:36:99:0,105,956	0/0:13,0:13:33.01:0,33,302	0/0:11,0:11:27.01:0,27,247	1/1:3,27:30:78.12:900,78,0	0/0:20,0:20:51:0,51,462	0/0:32,0:33:89.06:0,89,793	0/0:21,0:21:60.03:0,60,549	0/0:11,0:11:33.02:0,33,302	0/0:26,0:26:69.02:0,69,627	0/0:20,0:20:53.98:0,54,490	1/1:1,14:15:39.12:450,39,0	0/0:7,0:7:18.01:0,18,165	1/1:1,17:18:48.14:554,48,0	1/1:5,23:28:41.75:734,42,0	0/0:22,0:22:57.01:0,57,514	0/0:34,1:35:61.43:0,61,816	0/0:6,0:6:15:0,15,137	0/0:13,0:13:33:0,33,302	0/0:30,0:30:87.02:0,87,789	0/0:4,0:4:9:0,9,82	1/1:3,30:33:90.27:1039,90,0	0/0:18,0:19:53.04:0,53,468	0/0:34,0:34:96:0,96,864	0/0:13,0:13:36.01:0,36,330
chr10	3232345	.	AG	A	5787.87	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=14.593;DP=668;FS=3.666;HRun=7;HaplotypeScore=72.8853;InbreedingCoeff=0.9975;MQ=78.82;MQ0=0;MQRankSum=-0.684;QD=25.16;ReadPosRankSum=1.246;VQSLOD=5.4919;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,27:28:63.14:642,63,0	0/0:18,0:18:51.16:0,51,639	0/0:31,0:25:47.43:0,47,525	0/0:18,0:18:15.17:0,15,299	0/0:34,0:34:96.29:0,96,1191	0/0:29,0:28:81.25:0,81,1006	0/0:13,0:13:39.10:0,39,464	1/1:5,29:34:84.13:831,84,0	0/0:30,0:30:87.27:0,87,1080	0/0:29,0:29:78.25:0,78,980	0/0:34,0:34:93.30:0,93,1162	0/0:20,0:20:57.16:0,57,692	0/0:26,0:26:72.23:0,72,904	0/0:20,0:20:60.19:0,60,753	1/1:1,25:26:57.13:581,57,0	0/0:23,0:23:66.20:0,66,817	1/1:1,19:20:42.09:428,42,0	1/1:0,12:12:33.07:335,33,0	0/0:19,0:18:54.10:0,54,634	0/0:21,0:21:54.12:0,54,637	0/0:22,0:22:66.19:0,66,816	0/0:15,0:15:45.06:0,45,545	0/0:22,0:22:63.19:0,63,775	0/0:13,0:13:36.12:0,36,452	1/1:1,18:19:51.12:520,51,0	1/1:0,42:42:99:1196,120,0	1/1:2,30:32:78.17:795,78,0	1/1:1,16:17:45.10:459,45,0
chr10	3233203	.	T	TTGTTCTAAACAGA	26931.68	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=5.964;DP=594;FS=2.915;HRun=0;HaplotypeScore=260.0885;InbreedingCoeff=0.9992;MQ=64.37;MQ0=0;MQRankSum=-17.061;QD=122.42;ReadPosRankSum=-3.934;VQSLOD=4.1209;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,14:29:57.17:2227,57,0	0/0:10,0:10:27.09:0,27,1041	0/0:32,0:29:81.25:0,81,2796	0/0:23,0:20:44.87:0,45,1312	0/0:25,0:25:69.22:0,69,2637	0/0:21,0:21:48.16:0,48,1959	0/0:14,0:14:36.12:0,36,1325	1/1:7,0:22:57.20:2730,57,0	0/0:10,0:10:30.10:0,30,1155	0/0:30,0:30:90.30:0,90,3463	0/0:22,0:22:66.21:0,66,2509	0/0:18,0:18:51.15:0,51,1861	0/0:11,0:11:24.08:0,24,918	0/0:17,0:17:33.11:0,33,1302	1/1:12,14:26:46.38:2708,46,0	0/0:16,0:16:45.14:0,45,1682	1/1:5,8:15:30.10:1514,30,0	1/1:9,1:10:30.10:1452,30,0	0/0:24,0:24:69.24:0,69,2766	0/0:22,0:22:66.23:0,66,2653	0/0:18,0:18:54.15:0,54,2003	0/0:15,0:15:39.13:0,39,1527	0/0:18,0:18:51.18:0,51,1805	0/0:27,0:27:69.07:0,69,2573	1/1:14,13:28:51.93:3325,52,0	1/1:9,17:31:90.30:4926,90,0	1/1:21,22:46:99:6016,112,0	1/1:4,8:13:33.11:2032,33,0
chr10	3233210	.	G	GATAC	3611.87	PASS	AB=1.000;AC=14;AF=0.250;AN=56;BaseQRankSum=14.026;DP=564;FS=5.694;HRun=0;HaplotypeScore=182.7311;InbreedingCoeff=0.5451;MQ=62.74;MQ0=1;MQRankSum=-12.683;QD=17.28;ReadPosRankSum=0.310;VQSLOD=3.1258;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:21:0.66:35,1,0	0/0:10,0:10:30.08:0,30,538	0/0:33,0:29:84.18:0,84,1533	0/0:20,0:16:26.89:0,27,608	0/0:25,0:25:66.18:0,66,1220	0/0:21,0:21:54.17:0,54,983	0/0:13,0:13:35.99:0,36,642	1/1:32,11:43:99:2729,118,0	0/0:9,0:9:27.09:0,27,539	0/0:29,0:29:87.25:0,87,1610	0/0:21,0:21:60.20:0,60,1174	0/0:17,0:17:45.15:0,45,888	0/0:10,0:10:24.07:0,24,431	0/0:17,0:17:36.12:0,36,718	1/1:23,0:23:2.66:80,3,0	0/0:14,0:14:36.12:0,36,708	0/1:12,0:12:5.67:61,0,6	0/1:7,0:7:17.47:17,0,112	0/0:28,0:26:72.22:0,72,1273	0/0:21,0:21:63.22:0,63,1217	0/0:17,0:17:51.17:0,51,1007	0/0:16,0:16:39.13:0,39,747	0/0:13,0:13:36.08:0,36,632	0/0:21,0:21:57.18:0,57,994	1/1:26,0:26:18.97:64,19,0	0/1:27,0:27:99:382,0,269	0/1:39,0:39:99:131,0,162	1/1:11,0:11:16.48:113,16,0
chr10	3233224	.	G	GAGAC	1187.31	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=5.286;DP=511;FS=6.350;HRun=0;HaplotypeScore=159.2116;InbreedingCoeff=0.9601;MQ=60.69;MQ0=1;MQRankSum=-6.510;QD=15.03;ReadPosRankSum=1.738;VQSLOD=3.0325;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,0:24:20.76:165,21,0	0/0:9,0:9:24.05:0,24,375	0/0:31,0:27:33.07:0,33,511	0/0:21,0:17:24.96:0,25,437	0/0:23,0:23:48.12:0,48,732	0/0:18,0:18:39.13:0,39,658	0/0:11,0:11:22.56:0,23,402	0/0:43,0:43:69.10:0,69,1079	0/0:9,0:9:21.07:0,21,354	0/0:23,0:23:25.14:0,25,594	0/0:22,0:22:48.12:0,48,774	0/0:15,0:15:33.11:0,33,557	0/0:10,0:10:24.07:0,24,381	0/0:13,0:13:30.07:0,30,451	1/1:7,14:21:12.04:298,12,0	0/0:11,0:11:24.08:0,24,405	0/0:10,0:10:11.95:0,12,202	1/1:4,6:10:12.04:291,12,0	0/0:24,0:22:35.80:0,36,521	0/0:20,0:19:48.14:0,48,759	0/0:20,0:20:48.15:0,48,784	0/0:7,0:7:15.04:0,15,216	0/0:10,0:10:27.09:0,27,456	0/0:17,0:17:26.91:0,27,393	1/1:3,21:24:24.08:587,24,0	0/0:20,0:20:33.11:0,33,557	0/0:35,0:35:71.54:0,72,1084	0/0:10,0:10:18.06:0,18,287
chr10	3233353	.	AAAAAAAAAAAAAAC	A	272.99	PASS	AB=1.000;AC=3;AF=0.071;AN=42;BaseQRankSum=6.490;DP=316;FS=7.148;HRun=0;HaplotypeScore=145.0434;InbreedingCoeff=0.6159;MQ=54.70;MQ0=8;MQRankSum=-0.794;QD=10.50;ReadPosRankSum=2.646;VQSLOD=2.2353;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:6:6.02:0,6,192	0/0:7,0:7:21.07:0,21,1135	0/0:15,0:2:3.88:0,4,26	0/1:7,0:3:1.51:2,0,76	0/0:26,0:26:69.23:0,69,3605	0/0:18,0:18:54.19:0,54,2894	0/0:9,0:8:24.08:0,24,1239	./.	0/0:9,0:9:24.08:0,24,1210	0/0:29,0:29:82.16:0,82,4255	0/0:15,0:15:45.15:0,45,2417	0/0:17,0:17:45.15:0,45,2426	0/0:13,0:13:39.13:0,39,1849	0/0:11,0:11:24.08:0,24,1168	./.	0/0:12,0:12:36.12:0,36,2167	./.	./.	0/0:23,0:22:66.23:0,66,3465	0/0:26,0:26:75.26:0,75,3790	0/0:7,0:7:21.06:0,21,977	0/0:9,0:9:27.09:0,27,1497	0/0:15,0:15:36.59:0,37,1618	0/0:19,0:18:48.13:0,48,2704	./.	1/1:0,19:19:44.27:364,44,0	./.	./.
chr10	3233745	.	TTCC	T	487.55	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.290;DP=443;FS=0.000;HRun=0;HaplotypeScore=60.3630;InbreedingCoeff=0.9440;MQ=64.65;MQ0=0;MQRankSum=-1.441;QD=32.50;ReadPosRankSum=2.735;VQSLOD=3.6927;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,15:15:33.11:582,33,0	0/0:4,0:4:12.04:0,12,284	0/0:26,0:24:64.78:0,65,1575	0/0:30,0:27:75.15:0,75,1652	0/0:11,0:11:30.10:0,30,683	0/0:24,0:24:72.25:0,72,1703	0/0:19,0:19:57.16:0,57,1253	0/0:33,0:33:96.28:0,96,2156	0/0:16,0:16:48.16:0,48,1135	0/0:14,0:14:39.13:0,39,925	0/0:8,0:8:24.08:0,24,557	0/0:8,0:8:24.08:0,24,568	0/0:11,0:11:33.10:0,33,723	0/0:11,0:11:33.11:0,33,779	0/0:12,0:12:24.08:0,24,568	0/0:13,0:13:39.13:0,39,912	0/0:18,0:18:51.18:0,51,1206	0/0:20,0:20:30.10:0,30,709	0/0:18,0:18:54.19:0,54,1258	0/0:19,0:19:53.85:0,54,1216	0/0:29,0:29:87.30:0,87,2058	0/0:14,0:14:42.14:0,42,983	0/0:11,0:11:33.11:0,33,780	0/0:6,0:6:18.06:0,18,426	0/0:14,0:14:21.07:0,21,476	0/0:15,0:15:42.14:0,42,952	0/0:9,0:9:18.06:0,18,425	0/0:15,0:15:33.11:0,33,781
chr10	3233808	.	CATTT	C	4306.88	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=11.161;DP=433;FS=4.883;HRun=0;HaplotypeScore=81.7557;InbreedingCoeff=0.8913;MQ=58.62;MQ0=4;MQRankSum=-6.047;QD=30.12;ReadPosRankSum=0.901;VQSLOD=4.3370;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:11.99:0,12,326	0/0:4,0:4:12.04:0,12,333	0/0:29,0:18:53.73:0,54,537	0/0:20,0:13:34.57:0,35,521	0/0:17,0:17:50.99:0,51,1122	0/0:21,0:21:63.08:0,63,1281	0/0:10,0:10:29.99:0,30,371	1/1:0,26:26:73.01:547,73,0	0/0:10,0:10:30.05:0,30,619	0/0:14,0:14:42.11:0,42,822	0/0:12,0:12:35.91:0,36,650	0/0:11,0:11:33.04:0,33,643	0/0:11,0:11:33.06:0,33,652	0/0:8,0:8:24.04:0,24,496	1/1:0,11:11:21.07:436,21,0	0/0:15,0:15:45.06:0,45,830	0/1:18,0:18:18.80:19,0,658	1/1:0,18:18:12.04:249,12,0	0/0:19,0:16:54.03:0,54,885	0/0:21,0:21:63.14:0,63,1471	0/0:21,0:21:42.71:0,43,1062	0/0:16,0:16:48.07:0,48,916	0/0:12,0:12:32.98:0,33,562	0/0:7,0:7:21.04:0,21,467	1/1:0,21:21:39.13:810,39,0	1/1:1,16:17:24.09:736,24,0	1/1:0,21:21:51.18:1028,51,0	1/1:0,11:11:24.08:482,24,0
chr10	3233809	.	A	ATTTG	761.70	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=-4.738;DP=433;FS=1.303;HRun=0;HaplotypeScore=98.8362;InbreedingCoeff=0.7322;MQ=58.36;MQ0=5;MQRankSum=0.942;QD=14.65;ReadPosRankSum=0.369;VQSLOD=3.3874;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:21.07:0,21,271	0/0:4,0:4:9.03:0,9,141	0/1:28,0:17:0:0,0,0	0/0:20,0:13:9.03:0,9,140	0/0:17,0:17:33.11:0,33,514	0/0:21,0:21:34:0,34,515	0/0:9,0:9:6.02:0,6,94	0/0:26,0:26:6.60:0,7,31	0/0:10,0:10:18.06:0,18,280	1/1:4,9:13:27.08:593,27,0	1/1:6,5:11:12.04:284,12,0	0/0:10,0:10:18.05:0,18,261	0/0:11,0:11:15.05:0,15,235	0/0:8,0:8:15.03:0,15,212	0/0:11,0:11:21.02:0,21,195	0/0:15,0:15:21.07:0,21,323	0/0:19,0:19:27.99:0,28,474	0/0:19,0:19:5.87:0,6,103	0/0:19,0:16:21.07:0,21,329	0/0:21,0:21:45.14:0,45,680	0/0:21,0:21:28.90:0,29,403	0/0:16,0:16:24.08:0,24,375	0/0:12,0:12:12.03:0,12,166	0/0:7,0:7:15.05:0,15,232	0/0:21,0:21:39.04:0,39,363	0/0:17,0:17:29.21:0,29,251	0/0:21,0:21:50.54:0,51,451	0/0:12,0:11:21.50:0,21,197
chr10	3234887	.	AT	A	4228.43	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=12.878;DP=552;FS=3.691;HRun=7;HaplotypeScore=58.7070;InbreedingCoeff=0.9140;MQ=76.90;MQ0=0;MQRankSum=-3.271;QD=22.37;ReadPosRankSum=2.387;VQSLOD=5.0411;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,17:18:48.11:490,48,0	0/0:10,0:10:27.09:0,27,340	0/0:18,0:18:34.58:0,35,401	0/0:10,0:10:16.35:0,16,205	0/0:36,0:36:99:0,99,1224	0/0:19,0:19:48.15:0,48,604	0/0:13,0:13:33.08:0,33,389	0/1:27,0:27:17.36:17,0,180	0/0:17,0:17:48.14:0,48,591	0/0:27,0:27:75.23:0,75,923	0/0:27,0:27:72.23:0,72,906	0/0:12,0:12:33.11:0,33,415	0/0:21,0:21:60.18:0,60,741	0/0:19,0:19:48.15:0,48,604	1/1:3,23:26:66.15:673,66,0	0/0:21,0:20:60.18:0,60,741	1/1:3,10:13:30.07:306,30,0	1/1:1,15:16:45.10:459,45,0	0/0:20,0:20:54.16:0,54,667	0/0:37,0:37:99:0,105,1286	0/0:8,0:8:21.04:0,21,238	0/0:19,0:19:51.16:0,51,642	0/0:19,0:19:48.13:0,48,578	0/0:10,0:10:30.10:0,30,376	1/1:1,15:16:42.10:429,42,0	1/1:2,24:26:37.42:692,37,0	1/1:4,30:34:78.18:796,78,0	1/1:0,13:13:36.08:367,36,0
chr10	3235394	.	A	AAAATTGCCTTCAACT	37777.75	PASS	AB=0.607;AC=17;AF=0.304;AN=56;BaseQRankSum=-1.410;DP=726;FS=0.626;HRun=0;HaplotypeScore=279.2672;InbreedingCoeff=0.9031;MQ=89.35;MQ0=0;MQRankSum=-18.745;QD=149.32;ReadPosRankSum=0.776;VQSLOD=4.6178;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:23,10:39:72.25:4657,72,0	0/0:17,0:17:51.18:0,51,2182	0/0:35,0:35:87.27:0,87,3307	0/0:26,0:27:78.17:0,78,2452	0/0:35,0:34:99:0,105,4091	0/0:14,0:14:42.14:0,42,1803	0/0:23,0:23:66.23:0,66,2803	1/1:40,3:50:99:7025,129,0	0/0:23,0:23:66.21:0,66,2767	0/0:37,0:37:99:0,105,3986	0/0:16,0:16:48.15:0,48,1813	0/0:24,0:24:72.23:0,72,2888	0/0:17,0:17:51.18:0,51,2152	0/0:20,0:20:54.18:0,54,1977	1/1:19,18:43:99:6460,102,0	0/0:34,0:34:99:0,99,3831	1/1:10,6:17:39.13:2467,39,0	1/1:2,3:6:15.05:852,15,0	0/0:15,0:15:39.13:0,39,1560	0/0:21,0:21:60.19:0,60,2393	0/0:37,0:37:99:0,111,4401	0/0:23,0:23:69.16:0,69,2537	0/0:25,0:25:72.24:0,72,2814	0/0:30,0:30:78.27:0,78,3341	1/1:10,12:25:63.69:4292,64,0	0/1:12,18:34:32.70:6327,0,33	1/1:19,10:32:84.29:5210,84,0	1/1:3,2:7:9.03:487,9,0
chr10	3240054	.	CCA	C	2858.52	PASS	AB=0.568;AC=17;AF=0.304;AN=56;BaseQRankSum=16.254;DP=583;FS=7.813;HRun=0;HaplotypeScore=127.8639;InbreedingCoeff=0.8886;MQ=94.00;MQ0=0;MQRankSum=-15.892;QD=18.21;ReadPosRankSum=2.935;VQSLOD=3.1998;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,15:18:47.93:427,48,0	0/0:5,0:5:12.04:0,12,225	0/0:28,0:28:75.21:0,75,1353	0/0:30,0:30:87.30:0,87,1592	0/0:32,0:32:93.32:0,93,1716	0/0:18,0:18:51.16:0,51,913	0/0:27,0:27:78.27:0,78,1461	1/1:11,17:28:51.10:524,51,0	0/0:20,0:20:54.17:0,54,979	0/0:35,0:35:99:0,105,1963	0/0:21,0:21:63.22:0,63,1165	0/0:22,0:22:63.22:0,63,1179	0/0:22,0:22:63.22:0,63,1163	0/0:19,0:19:51.16:0,51,921	1/1:8,23:31:71.97:624,72,0	0/0:15,0:15:45.15:0,45,823	1/1:3,4:7:12.01:109,12,0	1/1:1,4:5:9.02:91,9,0	0/0:13,0:13:36.12:0,36,663	0/0:32,0:32:93.30:0,93,1709	0/0:21,0:21:60.19:0,60,1092	0/0:16,0:16:45.15:0,45,842	0/0:30,0:30:90.27:0,90,1650	0/0:20,0:20:60.21:0,60,1124	1/1:5,10:15:34.73:289,35,0	0/1:5,16:21:58.31:427,0,58	1/1:10,17:27:53.09:483,53,0	1/1:2,3:5:10.57:89,11,0
chr10	3240059	.	TA	T	3540.55	PASS	AB=0.529;AC=17;AF=0.304;AN=56;BaseQRankSum=15.935;DP=541;FS=5.567;HRun=1;HaplotypeScore=106.2051;InbreedingCoeff=0.8850;MQ=99.35;MQ0=0;MQRankSum=-15.885;QD=31.61;ReadPosRankSum=4.349;VQSLOD=3.2616;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,15:16:43.06:472,43,0	0/0:4,0:4:12.04:0,12,192	0/0:30,0:30:87.29:0,87,1368	0/0:32,0:32:93.28:0,93,1458	0/0:34,0:34:99:0,99,1558	0/0:17,0:17:51.17:0,51,810	0/0:28,0:28:84.29:0,84,1338	1/1:0,17:17:51.14:565,51,0	0/0:17,0:17:51.17:0,51,815	0/0:36,0:36:99:0,108,1706	0/0:23,0:23:69.21:0,69,1056	0/0:21,0:21:63.21:0,63,1007	0/0:21,0:21:63.17:0,63,978	0/0:16,0:16:48.12:0,48,739	1/1:0,23:23:69.20:776,69,0	0/0:16,0:16:48.14:0,48,722	1/1:0,4:4:12.03:135,12,0	1/1:0,4:4:8.61:100,9,0	0/0:13,0:13:39.11:0,39,599	0/0:31,0:31:93.32:0,93,1487	0/0:20,0:20:60.20:0,60,959	0/0:18,0:18:54.16:0,54,813	0/0:31,0:31:93.30:0,93,1461	0/0:21,0:21:63.21:0,63,1007	1/1:0,10:10:30.09:337,30,0	0/1:2,16:18:41.81:484,0,42	1/1:0,17:17:51.14:571,51,0	1/1:0,3:3:9.03:101,9,0
chr10	3240062	.	T	TTC	4040.30	PASS	AB=0.543;AC=17;AF=0.304;AN=56;BaseQRankSum=16.047;DP=550;FS=5.499;HRun=0;HaplotypeScore=118.1123;InbreedingCoeff=0.8905;MQ=96.62;MQ0=0;MQRankSum=-15.942;QD=34.83;ReadPosRankSum=3.949;VQSLOD=6.0368;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,15:15:42.13:512,42,0	0/0:4,0:4:12.04:0,12,196	0/0:27,0:27:81.26:0,81,1282	0/0:31,0:31:90.30:0,90,1427	0/0:40,0:40:99:0,114,1800	0/0:17,0:17:51.17:0,51,832	0/0:27,0:27:81.28:0,81,1316	1/1:3,17:20:54.17:727,54,0	0/0:17,0:17:51.15:0,51,783	0/0:36,0:36:99:0,108,1710	0/0:24,0:24:69.24:0,69,1126	0/0:21,0:21:63.22:0,63,1028	0/0:19,0:19:57.19:0,57,913	0/0:16,0:16:48.16:0,48,781	1/1:0,23:23:69.21:823,69,0	0/0:16,0:16:45.15:0,45,729	1/1:0,4:4:12.04:144,12,0	1/1:0,4:4:12.04:159,12,0	0/0:14,0:14:39.13:0,39,632	0/0:31,0:31:93.30:0,93,1494	0/0:20,0:20:60.20:0,60,976	0/0:19,0:19:57.17:0,57,883	0/0:31,0:31:93.32:0,93,1515	0/0:24,0:24:66.18:0,66,1048	1/1:1,10:11:30.09:364,30,0	0/1:3,16:19:43.75:576,0,44	1/1:0,17:17:51.16:621,51,0	1/1:0,3:3:9.03:114,9,0
chr10	3240201	.	T	TA	847.27	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-4.592;DP=645;FS=3.725;HRun=7;HaplotypeScore=63.3446;InbreedingCoeff=0.9987;MQ=81.96;MQ0=0;MQRankSum=-2.673;QD=24.21;ReadPosRankSum=2.117;VQSLOD=4.1451;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,32:35:78.24:942,78,0	0/0:11,0:11:27.04:0,27,261	0/0:17,0:17:42.06:0,42,403	0/0:20,0:20:51.07:0,51,491	0/0:23,0:23:51.08:0,51,492	0/0:30,0:30:87.14:0,87,840	0/0:25,0:25:66.09:0,66,631	0/0:32,0:32:81.12:0,81,782	0/0:17,0:17:45.05:0,45,423	0/0:28,0:28:81.10:0,81,773	0/0:25,0:25:72.08:0,72,682	0/0:26,0:26:75.12:0,75,724	0/0:19,0:19:48.08:0,48,464	0/0:17,0:17:45.05:0,45,429	0/0:28,0:27:75.12:0,75,724	0/0:24,0:24:57.09:0,57,551	0/0:22,0:22:63.07:0,63,601	0/0:15,0:15:42.07:0,42,406	0/0:24,0:24:69.11:0,69,666	0/0:18,0:18:54.07:0,54,515	0/0:23,0:23:66.11:0,66,637	0/0:24,0:24:66.10:0,66,634	0/0:19,0:19:54.07:0,54,516	0/0:22,0:22:51.07:0,51,492	0/0:24,0:24:66.10:0,66,637	0/0:32,0:32:96.13:0,96,918	0/0:33,0:33:84.12:0,84,811	0/0:12,0:12:36.06:0,36,348
chr10	3241139	.	TCTTCCTGAGGACCACCG	T	2464.09	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=3.677;DP=550;FS=6.114;HRun=0;HaplotypeScore=241.0240;InbreedingCoeff=0.9402;MQ=83.84;MQ0=1;MQRankSum=-4.288;QD=13.84;ReadPosRankSum=2.946;VQSLOD=1.8157;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:22:59.62:511,60,0	0/0:10,0:10:24:0,24,441	0/0:24,0:22:24.76:0,25,336	0/0:27,0:24:38.33:0,38,419	0/0:12,0:12:35.78:0,36,822	0/0:16,0:16:41.99:0,42,1241	0/0:25,0:25:60.03:0,60,960	1/1:30,0:29:74.16:521,74,0	0/0:19,0:19:51.01:0,51,1103	0/0:13,0:13:36.04:0,36,592	0/0:9,0:9:24.01:0,24,531	0/0:29,0:29:81.13:0,81,2755	0/0:29,0:29:77.25:0,77,2053	0/0:25,0:25:68.93:0,69,1563	1/1:3,26:29:2.48:76,2,0	0/0:14,0:14:38.98:0,39,964	1/1:23,0:23:62.39:469,62,0	1/1:15,0:15:41.50:309,41,0	0/0:18,0:18:44.61:0,45,550	0/0:10,0:10:24:0,24,423	0/0:47,0:47:99:0,129,2947	0/0:10,0:10:27:0,27,604	0/0:12,0:12:29.82:0,30,791	0/0:23,0:23:63.02:0,63,1980	1/1:18,0:18:44.13:291,44,0	1/1:6,0:25:29.54:213,30,0	1/1:15,0:15:38.23:258,38,0	1/1:1,0:1:2.96:19,3,0
chr10	3241363	.	AG	A	453.45	PASS	AB=0.878;AC=6;AF=0.107;AN=56;BaseQRankSum=2.011;DP=320;FS=8.931;HRun=8;HaplotypeScore=55.9428;InbreedingCoeff=0.4974;MQ=79.76;MQ0=10;MQRankSum=-1.247;QD=8.89;ReadPosRankSum=-1.168;VQSLOD=0.6022;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,9:16:30.05:295,30,0	0/0:13,0:13:27.01:0,27,294	0/0:18,0:9:14.07:0,14,144	0/0:35,0:20:28.48:0,28,319	0/0:14,0:14:30.09:0,30,362	0/0:2,0:2:6.02:0,6,72	0/0:18,0:18:48.15:0,48,579	1/1:9,7:16:8.72:259,9,0	0/0:3,0:3:9.02:0,9,98	0/0:7,0:7:12.01:0,12,124	0/0:6,0:6:9.02:0,9,99	0/0:7,0:7:21.01:0,21,226	0/0:9,0:9:21.02:0,21,218	0/0:10,0:10:27.08:0,27,325	0/0:13,0:13:38.90:0,39,388	0/0:7,0:8:23.90:0,24,236	0/1:11,1:11:9.92:10,0,194	0/0:8,0:7:12.04:0,12,144	0/1:4,1:5:16.96:17,0,86	0/0:10,0:10:24.06:0,24,277	0/0:16,0:15:29.88:0,30,361	0/0:3,0:3:6.02:0,6,72	0/0:8,0:8:15.05:0,15,181	0/0:12,0:12:33.07:0,33,383	0/0:11,0:12:17.04:0,17,169	0/0:19,0:17:30.08:0,30,352	0/0:14,0:13:30.09:0,30,362	0/0:4,0:3:9.03:0,9,108
chr10	3241393	.	GA	G	302.88	PASS	AB=1.000;AC=10;AF=0.179;AN=56;BaseQRankSum=6.914;DP=323;FS=0.699;HRun=1;HaplotypeScore=70.1899;InbreedingCoeff=0.3700;MQ=53.58;MQ0=21;MQRankSum=-5.963;QD=2.91;ReadPosRankSum=3.134;VQSLOD=-0.2618;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:17:4.51:0,5,70	0/0:10,0:10:20.88:0,21,216	0/0:14,0:3:3.01:0,3,40	0/0:29,0:7:5.74:0,6,51	0/0:15,0:14:24.02:0,24,257	0/0:3,0:3:6.47:0,6,68	0/0:11,0:11:32.97:0,33,340	0/1:18,0:17:37.36:37,0,51	0/0:7,0:7:15.50:0,16,191	0/0:5,0:5:8.99:0,9,91	0/0:6,0:4:9.02:0,9,109	0/0:10,0:9:16.83:0,17,167	0/0:16,0:15:34.22:0,34,357	0/0:8,0:8:15.01:0,15,177	1/1:13,9:20:23.38:197,23,0	0/0:7,0:7:14.83:0,15,178	0/1:14,0:12:13.56:14,0,30	1/1:4,1:4:8.98:89,9,0	0/0:5,0:4:12.03:0,12,141	0/0:7,0:7:15.18:0,15,170	0/0:16,0:14:29.44:0,29,339	0/0:4,0:4:6.02:0,6,85	0/0:7,0:7:11.08:0,11,152	0/1:6,0:6:10:10,0,18	1/1:5,10:15:12.33:101,12,0	0/1:24,0:22:0.83:1,0,123	0/0:16,0:14:4.70:0,5,106	0/0:3,0:2:5.94:0,6,41
chr10	3241395	.	G	GA	1399.24	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=7.883;DP=321;FS=1.180;HRun=1;HaplotypeScore=67.3890;InbreedingCoeff=0.7536;MQ=51.93;MQ0=21;MQRankSum=-6.915;QD=10.14;ReadPosRankSum=3.894;VQSLOD=1.7086;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,8:15:17.36:137,17,0	0/0:10,0:10:24:0,24,263	0/0:14,0:3:5.16:0,5,25	0/0:26,0:5:8.11:0,8,63	0/0:14,0:13:21.01:0,21,241	0/0:3,0:3:6.48:0,6,69	0/0:13,0:13:34.24:0,34,346	1/1:18,0:16:24.08:370,24,0	0/0:7,0:7:18.92:0,19,219	0/0:5,0:5:9.02:0,9,100	0/0:6,0:4:9.01:0,9,95	0/0:11,0:10:19.72:0,20,201	0/0:16,0:15:38.62:0,39,417	0/0:8,0:8:18:0,18,193	1/1:22,0:20:7.71:145,8,0	0/0:9,0:9:17.90:0,18,188	1/1:11,2:11:2.82:117,3,0	1/1:4,1:4:8.35:61,8,0	0/0:5,0:4:12.02:0,12,135	0/0:7,0:7:12.46:0,12,150	0/0:16,0:14:29.99:0,30,344	0/0:4,0:4:5.96:0,6,77	0/0:9,0:9:13.24:0,13,133	0/1:5,0:5:20.51:26,0,21	1/1:15,0:15:11.53:65,12,0	1/1:17,6:21:28.71:406,29,0	1/1:12,3:14:16.80:188,17,0	1/1:2,1:2:6.02:79,6,0
chr10	3241397	.	G	GA	1105.74	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=7.760;DP=325;FS=0.000;HRun=0;HaplotypeScore=71.0767;InbreedingCoeff=0.6410;MQ=51.71;MQ0=22;MQRankSum=-5.977;QD=7.27;ReadPosRankSum=3.487;VQSLOD=3.1672;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:16,1:13:12.36:91,12,0	0/0:10,0:10:24:0,24,279	0/1:14,0:3:0.62:1,0,20	0/0:26,0:5:11.03:0,11,91	0/0:14,0:13:17.15:0,17,234	0/0:5,0:5:6.48:0,6,68	0/0:12,0:12:32.89:0,33,340	1/1:17,0:16:22.94:373,23,0	0/0:7,0:7:19.59:0,20,222	0/0:6,0:6:6.02:0,6,81	0/0:6,0:4:9.02:0,9,110	0/0:12,0:11:20.89:0,21,225	0/0:15,0:14:39.48:0,39,463	0/0:11,0:10:18:0,18,195	1/1:22,0:20:19.97:179,20,0	0/0:8,0:8:20.98:0,21,221	1/1:13,0:11:2.20:115,2,0	1/1:2,3:4:9:101,9,0	0/0:5,0:4:12.02:0,12,135	0/0:8,0:8:17.15:0,17,163	0/0:15,0:13:30.04:0,30,365	0/0:4,0:4:5.95:0,6,84	0/0:9,0:9:14.96:0,15,169	0/1:7,0:7:16.39:16,0,38	1/1:14,2:16:14.62:116,15,0	1/1:23,0:21:18.16:189,18,0	0/1:16,0:14:62.71:75,0,63	1/1:2,0:2:2.09:37,2,0
chr10	3243358	.	A	AG	73.07	PASS	AB=0.636;AC=3;AF=0.060;AN=50;BaseQRankSum=-0.467;DP=142;FS=0.000;HRun=2;HaplotypeScore=18.8380;InbreedingCoeff=0.1700;MQ=73.22;MQ0=2;MQRankSum=-1.916;QD=8.12;ReadPosRankSum=-0.860;VQSLOD=0.4605;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:3,4:7:22.02:135,0,22	0/0:1,0:1:3.01:0,3,37	0/0:17,0:12:30.08:0,30,357	0/0:12,0:6:11.77:0,12,122	./.	0/0:3,0:3:6.02:0,6,74	0/0:16,0:16:42.13:0,42,520	0/0:7,0:6:7.26:0,7,91	0/0:2,0:2:6.02:0,6,74	0/0:8,0:8:21.07:0,21,260	0/0:3,0:3:9.03:0,9,111	0/0:6,0:6:13.28:0,13,151	0/0:3,0:3:9.03:0,9,110	0/0:6,0:6:18.02:0,18,207	0/0:3,0:3:9.02:0,9,99	./.	0/0:5,0:5:12.01:0,12,133	0/0:3,0:3:9.03:0,9,110	0/0:6,0:6:11.97:0,12,129	0/0:2,0:2:3.48:0,3,38	0/0:8,0:8:15.05:0,15,186	0/0:1,0:1:3.01:0,3,37	0/0:5,0:4:12.04:0,12,149	0/0:10,0:9:24.07:0,24,296	0/0:3,0:3:9.03:0,9,111	1/1:2,0:2:2.94:27,3,0	0/0:3,0:3:9.03:0,9,112	./.
chr10	3243674	.	T	TAAATATA	782.83	PASS	AB=0.961;AC=10;AF=0.217;AN=46;BaseQRankSum=6.705;DP=132;FS=27.933;HRun=0;HaplotypeScore=58.1784;InbreedingCoeff=-0.1943;MQ=65.08;MQ0=2;MQRankSum=-6.046;QD=8.70;ReadPosRankSum=-0.648;VQSLOD=-0.0269;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:12,0:11:45.83:46,0,57	0/0:2,0:2:6.02:0,6,168	./.	0/0:7,0:8:14.07:0,14,151	0/0:1,0:1:3.01:0,3,39	0/0:6,0:6:18.06:0,18,474	0/0:3,0:3:9.03:0,9,194	0/1:27,0:22:22.87:23,0,582	0/0:1,0:1:3.01:0,3,84	0/0:2,0:2:3.01:0,3,84	0/0:2,0:2:6.01:0,6,96	0/0:2,0:2:6.02:0,6,168	0/0:1,0:1:3.01:0,3,84	./.	1/1:1,1:2:5.61:102,6,0	0/0:3,0:3:9.03:0,9,195	0/1:11,0:11:57.18:57,0,286	0/1:12,2:13:59.51:325,0,60	0/0:5,0:5:12.51:0,13,326	0/0:1,0:1:3.01:0,3,84	0/0:2,0:2:6.02:0,6,168	./.	./.	./.	0/1:6,1:6:14.60:224,0,15	0/1:2,0:2:10.03:10,0,78	0/1:7,0:7:53.04:53,0,126	0/1:6,0:6:66.64:70,0,67
chr10	3243681	.	A	AATAAAT	1190.47	PASS	AB=1.000;AC=11;AF=0.220;AN=50;BaseQRankSum=5.608;DP=153;FS=10.142;HRun=0;HaplotypeScore=52.6607;InbreedingCoeff=-0.0397;MQ=52.78;MQ0=2;MQRankSum=-5.688;QD=12.02;ReadPosRankSum=0.698;VQSLOD=0.7601;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,8:13:11.97:250,12,0	0/0:2,0:2:6.02:0,6,136	./.	0/0:5,0:5:1.48:0,1,82	0/0:2,0:2:3.01:0,3,64	0/0:7,0:7:21.07:0,21,422	0/0:4,0:4:9.02:0,9,157	0/1:31,0:24:52.61:259,0,53	0/0:1,0:1:3.01:0,3,68	0/0:2,0:2:3.01:0,3,68	0/0:4,0:4:9:0,9,114	0/0:3,0:3:9.03:0,9,178	0/0:1,0:1:3.01:0,3,68	0/0:1,0:1:3.01:0,3,42	0/1:2,0:3:31.31:78,0,31	0/0:5,0:5:9.03:0,9,175	0/1:13,0:13:99:250,0,140	0/1:13,0:12:99:245,0,105	0/0:9,0:9:24.93:0,25,368	0/0:1,0:1:3.01:0,3,68	0/0:2,0:2:6.02:0,6,136	./.	0/0:1,0:1:2.99:0,3,23	./.	1/1:5,0:4:7.28:166,7,0	0/1:5,0:5:3.75:4,0,81	0/1:6,0:6:32.17:32,0,111	0/1:9,0:9:42.49:42,0,68
chr10	3243683	.	T	TAA	762.70	PASS	AB=0.874;AC=12;AF=0.231;AN=52;BaseQRankSum=6.206;DP=156;FS=3.226;HRun=3;HaplotypeScore=39.4732;InbreedingCoeff=-0.1081;MQ=56.35;MQ0=2;MQRankSum=-4.937;QD=7.26;ReadPosRankSum=0.473;VQSLOD=0.2121;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:13:8.99:97,9,0	0/0:3,0:3:9.02:0,9,109	1/1:5,0:1:0.47:1,0,0	0/0:4,0:4:4.37:0,4,83	0/0:2,0:2:6:0,6,66	0/0:7,0:7:21.07:0,21,292	0/0:4,0:4:9.03:0,9,124	0/1:30,0:23:35.70:36,0,202	0/0:1,0:1:3.01:0,3,42	0/0:2,0:2:3.01:0,3,42	0/0:6,0:6:15.02:0,15,174	0/0:3,0:3:9.03:0,9,126	0/0:1,0:1:3.01:0,3,42	0/0:1,0:1:3.01:0,3,42	0/1:2,1:3:31.01:69,0,31	0/0:4,0:4:12.03:0,12,151	0/1:10,3:13:99:221,0,140	0/1:9,4:12:99:228,0,163	0/0:9,0:9:18.70:0,19,323	0/0:1,0:1:3.01:0,3,42	0/0:2,0:2:6.02:0,6,84	./.	0/0:1,0:1:3.01:0,3,39	./.	0/1:3,3:5:8.87:138,0,9	0/1:6,0:6:26.70:27,0,29	0/1:6,0:6:33.07:33,0,107	0/1:9,0:9:46.26:46,0,66
chr10	3243687	.	T	TAA	1239.98	PASS	AB=0.821;AC=13;AF=0.241;AN=54;BaseQRankSum=6.582;DP=167;FS=4.204;HRun=3;HaplotypeScore=38.5103;InbreedingCoeff=-0.1157;MQ=53.08;MQ0=2;MQRankSum=-5.865;QD=10.78;ReadPosRankSum=1.714;VQSLOD=0.7042;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:16,0:15:25.11:25,0,83	0/0:3,0:3:9.03:0,9,126	1/1:5,0:1:1.55:4,2,0	0/1:3,0:3:3.79:4,0,61	0/0:2,0:2:6.02:0,6,84	0/0:7,0:7:21.07:0,21,291	0/0:3,0:3:9.03:0,9,126	0/1:12,18:23:99:506,0,165	0/0:2,0:2:3.01:0,3,42	0/0:2,0:2:3.01:0,3,42	0/0:6,0:6:15.05:0,15,209	0/0:3,0:3:9.03:0,9,126	0/0:1,0:1:3.01:0,3,34	0/0:2,0:2:6.02:0,6,82	0/1:4,0:4:14.59:15,0,18	0/0:5,0:5:15.05:0,15,208	0/1:13,0:13:60.58:61,0,163	0/1:14,0:13:62.72:105,0,63	0/0:10,0:10:26.20:0,26,356	0/0:1,0:1:3.01:0,3,42	0/0:2,0:2:6.02:0,6,84	0/0:1,0:1:3:0,3,25	0/0:2,0:2:3.01:0,3,42	./.	1/1:6,0:5:11.78:85,12,0	0/1:1,5:6:26.94:175,0,27	0/1:3,4:7:99:146,0,107	0/1:3,7:11:62.43:253,0,62
chr10	3243714	.	A	AT	395.85	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.523;DP=293;FS=6.167;HRun=6;HaplotypeScore=54.0493;InbreedingCoeff=0.7171;MQ=76.95;MQ0=0;MQRankSum=-1.899;QD=28.27;ReadPosRankSum=1.746;VQSLOD=4.2615;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:42.07:0,42,420	0/0:6,0:6:15.03:0,15,153	0/0:9,0:9:21.93:0,22,214	0/0:9,0:8:17.97:0,18,164	0/0:10,0:10:21.04:0,21,214	0/0:8,0:8:24.05:0,24,245	0/0:5,0:5:15.03:0,15,153	0/0:33,0:32:87.15:0,87,873	0/0:2,0:2:6.01:0,6,61	0/0:7,0:7:21.05:0,21,214	0/0:8,0:8:24.05:0,24,245	0/0:7,0:7:21.03:0,21,208	0/0:7,0:7:18.01:0,18,175	0/0:5,0:5:12.02:0,12,122	0/0:8,0:8:24.04:0,24,238	0/0:16,0:16:48.08:0,48,476	1/1:1,13:14:39.12:490,39,0	0/0:17,0:17:32.41:0,32,388	0/0:20,0:20:60.14:0,60,612	0/0:4,0:4:9.02:0,9,92	0/0:11,0:11:30.07:0,30,306	0/0:6,0:6:18.03:0,18,177	0/0:8,0:8:24.05:0,24,245	0/0:2,0:2:6.01:0,6,61	0/0:9,0:9:21.05:0,21,214	0/0:13,0:13:30.06:0,30,306	0/0:12,0:12:30.05:0,30,299	0/0:15,0:15:33.06:0,33,329
chr10	3245798	.	AG	A	1105.71	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.676;DP=776;FS=7.823;HRun=4;HaplotypeScore=75.1901;InbreedingCoeff=0.9960;MQ=94.50;MQ0=0;MQRankSum=0.702;QD=31.59;ReadPosRankSum=-4.141;VQSLOD=1.9847;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,144,1976	0/0:7,0:7:21.07:0,21,294	0/0:38,0:38:99:0,101,1288	0/0:32,0:32:52.77:0,53,983	0/0:30,0:30:86.77:0,87,1168	0/0:28,0:28:78.19:0,78,1036	0/0:21,0:21:63.21:0,63,881	1/1:0,35:35:99:1201,102,0	0/0:19,0:19:54.15:0,54,734	0/0:28,0:28:78.17:0,78,1009	0/0:21,0:21:63.21:0,63,876	0/0:39,0:39:99:0,117,1621	0/0:32,0:32:90.30:0,90,1259	0/0:22,0:22:66.20:0,66,906	0/0:17,0:17:51.17:0,51,713	0/0:33,0:33:96.29:0,96,1289	0/0:36,0:36:96.07:0,96,1342	0/0:20,0:20:57.19:0,57,798	0/0:27,0:27:75.23:0,75,1020	0/0:27,0:27:81.26:0,81,1102	0/0:33,0:33:96.29:0,96,1308	0/0:31,0:31:87.28:0,87,1196	0/0:26,0:26:78.23:0,78,1046	0/0:28,0:28:75.22:0,75,1011	0/0:23,0:23:63.21:0,63,881	0/0:29,0:29:87.29:0,87,1218	0/0:31,0:31:90.24:0,90,1209	0/0:14,0:14:42.14:0,42,588
chr10	3247069	.	G	GACACAC	7716.33	PASS	AB=0.909;AC=18;AF=0.321;AN=56;BaseQRankSum=9.189;DP=1056;FS=2.884;HRun=0;HaplotypeScore=213.4597;InbreedingCoeff=0.8183;MQ=61.89;MQ0=11;MQRankSum=-8.442;QD=20.74;ReadPosRankSum=2.321;VQSLOD=4.4630;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,43:64:46.89:1542,47,0	0/0:11,0:11:10.10:0,10,517	0/0:32,0:21:26.10:0,26,676	0/1:43,0:36:26.94:27,0,674	0/0:40,0:40:99:0,114,2288	0/0:38,0:38:87.24:0,87,1742	0/0:39,0:39:93.22:0,93,1711	1/1:54,0:52:99:734,104,0	0/0:37,0:37:99:0,105,2049	0/0:54,0:54:99:0,138,2662	0/0:26,0:26:72.17:0,72,1335	0/0:29,0:29:84.18:0,84,1531	0/0:38,0:38:87.27:0,87,1765	0/0:34,0:34:95.99:0,96,1803	1/1:7,36:49:60.21:2028,60,0	0/0:43,0:43:99:0,120,2280	1/1:11,0:31:21.07:548,21,0	1/1:7,12:20:9.02:190,9,0	0/0:27,0:25:56.87:0,57,1034	0/0:48,0:48:99:0,111,2143	0/0:69,0:67:99:0,169,3279	0/0:39,0:39:99:0,102,1839	0/0:31,0:31:81.14:0,81,1483	0/0:49,0:49:99:0,129,2486	1/1:5,23:29:36.11:1080,36,0	1/1:3,0:34:18.78:709,19,0	1/1:4,0:34:56.95:750,57,0	0/1:7,0:9:23.35:108,0,23
chr10	3247268	.	T	TAC	3460.24	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-3.232;DP=1065;FS=0.000;HRun=0;HaplotypeScore=145.0119;InbreedingCoeff=0.9958;MQ=55.00;MQ0=15;MQRankSum=2.854;QD=34.26;ReadPosRankSum=-3.897;VQSLOD=3.8113;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,24:39:78.19:1188,78,0	0/0:9,0:9:18.06:0,18,229	0/0:61,0:23:53.93:0,54,647	0/0:70,0:32:83.25:0,83,914	0/0:23,0:23:65.76:0,66,782	0/0:41,0:41:99:0,105,1306	0/0:29,0:29:69.06:0,69,847	1/1:12,49:62:99:2273,150,0	0/0:32,0:32:84.22:0,84,1025	0/0:50,0:50:99:0,129,1630	0/0:26,0:26:72.21:0,72,901	0/0:37,0:37:99:0,105,1322	0/0:36,0:36:93.28:0,93,1166	0/0:36,0:36:96.29:0,96,1207	0/0:41,0:41:81.20:0,81,1016	0/0:38,0:38:93.28:0,93,1168	0/0:33,0:33:78.24:0,78,991	0/0:30,0:30:63.20:0,63,801	0/0:35,0:32:84.16:0,84,993	0/0:42,0:42:99:0,117,1472	0/0:96,0:97:99:0,238,2941	0/0:29,0:29:78.25:0,78,990	0/0:19,0:19:54.16:0,54,673	0/0:45,0:45:99:0,115,1449	0/0:30,0:30:81.25:0,81,1016	0/0:33,0:33:84.26:0,84,1057	0/0:27,0:27:69.22:0,69,878	0/0:15,0:15:38.97:0,39,423
chr10	3247854	.	CACA	C	2254.99	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.712;DP=771;FS=0.543;HRun=0;HaplotypeScore=103.8382;InbreedingCoeff=0.9990;MQ=79.01;MQ0=0;MQRankSum=-2.794;QD=36.37;ReadPosRankSum=2.446;VQSLOD=4.1137;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:84.27:0,84,1860	0/0:12,0:12:36.12:0,36,816	0/0:23,0:23:69.23:0,69,1452	0/0:27,0:27:81.20:0,81,1671	0/0:33,0:33:99:0,99,2201	0/0:31,0:31:93.31:0,93,2064	0/0:35,0:35:99:0,99,2184	0/0:40,0:40:99:0,111,2353	0/0:25,0:25:72.21:0,72,1537	0/0:40,0:40:99:0,114,2500	0/0:23,0:23:63.22:0,63,1425	0/0:29,0:29:84.29:0,84,1886	0/0:46,0:46:99:0,138,3033	0/0:22,0:22:66.21:0,66,1435	1/1:1,30:31:69.24:1149,69,0	0/0:30,0:30:87.30:0,87,1971	0/0:27,0:27:75.23:0,75,1650	1/1:0,9:9:24.08:399,24,0	0/0:21,0:21:54.19:0,54,1214	0/0:33,0:33:93.31:0,93,2064	0/0:35,0:35:99:0,102,2309	0/0:21,0:21:60.18:0,60,1275	0/0:28,0:28:78.24:0,78,1676	0/0:23,0:23:69.24:0,69,1560	1/1:1,21:22:51.17:849,51,0	0/0:34,0:34:99:0,102,2138	0/0:27,0:27:81.27:0,81,1794	0/0:10,0:10:30.07:0,30,624
chr10	3248192	.	AT	A	764.96	PASS	AB=0.823;AC=10;AF=0.185;AN=54;BaseQRankSum=4.824;DP=371;FS=25.301;HRun=13;HaplotypeScore=42.1752;InbreedingCoeff=0.3228;MQ=66.45;MQ0=15;MQRankSum=0.810;QD=6.17;ReadPosRankSum=-0.886;VQSLOD=0.0961;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,22:25:52.70:376,53,0	0/0:7,0:7:14.98:0,15,135	./.	0/0:8,0:6:0:0,0,0	0/1:13,3:18:39.61:40,0,156	0/0:12,0:13:35.73:0,36,319	0/0:14,0:12:20.92:0,21,178	0/1:4,0:9:2.96:23,0,3	0/0:12,0:11:23.99:0,24,224	0/0:11,0:11:27.04:0,27,263	0/0:12,1:13:13.98:0,14,284	0/0:12,1:13:1.87:0,2,153	0/0:17,1:19:16.98:0,17,312	0/1:8,1:8:0.57:1,0,128	0/0:8,0:8:15.02:0,15,146	0/1:7,2:9:19.60:20,0,151	1/1:6,20:25:59.64:436,60,0	0/0:15,0:17:39.62:0,40,351	0/0:11,0:9:15:0,15,138	0/1:13,2:16:7.98:8,0,230	0/0:11,0:8:24.04:0,24,233	0/0:13,0:12:21.03:0,21,204	0/0:16,0:15:27.04:0,27,263	0/0:9,1:12:1.69:0,2,152	0/1:8,1:9:3.87:4,0,128	0/0:3,0:22:28.62:0,29,239	0/0:3,0:10:23.05:0,23,143	0/0:2,0:6:14.37:0,14,86
chr10	3249050	.	AGGAT	A	3834.95	PASS	AB=0.858;AC=16;AF=0.308;AN=52;BaseQRankSum=6.962;DP=707;FS=20.426;HRun=0;HaplotypeScore=122.3297;InbreedingCoeff=0.7883;MQ=66.51;MQ0=6;MQRankSum=-3.136;QD=16.97;ReadPosRankSum=0.261;VQSLOD=1.5532;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:29,5:33:35.40:561,35,0	0/0:15,0:15:23.95:0,24,491	0/0:28,0:18:5.23:0,5,64	./.	0/0:34,0:34:48.16:0,48,1104	0/0:28,0:28:45.15:0,45,1014	0/0:22,0:22:39.12:0,39,848	1/1:25,0:23:6.01:62,6,0	0/1:18,1:19:5.21:5,0,870	0/0:28,0:28:48.16:0,48,1122	0/0:15,0:15:30.10:0,30,698	0/0:29,0:29:48.16:0,48,1067	0/0:31,0:31:51.18:0,51,1172	0/0:38,0:38:45.14:0,45,984	1/1:28,7:34:44.57:607,45,0	0/0:31,0:31:57.20:0,57,1330	1/1:16,2:18:9.03:142,9,0	1/1:14,4:18:28.66:561,29,0	0/0:19,0:18:33.10:0,33,724	0/0:21,0:21:45.15:0,45,1054	0/0:41,0:41:60.21:0,60,1359	0/0:19,0:19:33.11:0,33,779	0/0:23,0:23:51.17:0,51,1179	0/0:35,0:35:51.17:0,51,1157	1/1:23,5:28:63.21:993,63,0	0/1:16,7:23:67.28:433,0,67	1/1:9,17:26:30.10:471,30,0	./.
chr10	3249086	.	TGG	T	576.04	PASS	AB=0.886;AC=5;AF=0.096;AN=52;BaseQRankSum=12.786;DP=760;FS=1.124;HRun=2;HaplotypeScore=155.4462;InbreedingCoeff=0.6697;MQ=51.70;MQ0=61;MQRankSum=2.469;QD=6.62;ReadPosRankSum=2.424;VQSLOD=0.4382;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:2.58:0,3,218	0/0:15,0:15:21.70:0,22,424	0/0:24,0:4:8.99:0,9,98	./.	0/0:27,14:40:38.85:0,39,889	0/0:27,0:26:75.21:0,75,1279	0/0:29,0:26:69.22:0,69,1140	0/0:30,2:20:33.31:0,33,847	0/0:24,0:24:68.29:0,68,1230	0/0:30,0:26:78.27:0,78,1395	0/0:19,0:19:57.18:0,57,997	0/0:32,0:32:48.12:0,48,871	0/1:27,4:31:99:175,0,931	0/0:35,0:35:27.69:0,28,730	1/1:28,3:30:30.77:249,31,0	0/0:29,0:29:87.27:0,87,1542	0/0:15,0:15:7.58:0,8,119	1/1:20,4:24:44.36:279,44,0	0/0:21,0:20:21.75:0,22,821	0/0:25,0:24:72.22:0,72,1290	0/0:35,0:35:60.17:0,60,1095	0/0:19,0:18:51.15:0,51,924	0/0:21,0:21:63.20:0,63,1180	0/0:29,1:30:75.22:0,75,1386	0/0:35,1:36:14.56:0,15,509	0/0:32,0:32:38.03:0,38,745	0/0:38,0:38:32.83:0,33,561	./.
chr10	3249088	.	G	GAGAT	2897.79	PASS	AB=0.807;AC=17;AF=0.340;AN=50;BaseQRankSum=-0.119;DP=772;FS=11.923;HRun=0;HaplotypeScore=178.0305;InbreedingCoeff=0.6205;MQ=51.73;MQ0=61;MQRankSum=2.883;QD=9.66;ReadPosRankSum=1.198;VQSLOD=2.4175;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:31:13.58:0,14,164	1/1:7,8:15:3.01:54,3,0	./.	./.	1/1:41,0:40:8.87:159,9,0	0/0:26,0:25:30.09:0,30,427	0/0:29,0:26:36.11:0,36,533	0/0:33,0:21:17.99:0,18,189	0/0:24,0:24:42.14:0,42,647	0/0:31,0:27:36.12:0,36,538	0/0:20,0:20:27.08:0,27,399	1/1:13,17:30:3.01:70,3,0	1/1:34,0:34:48.11:972,48,0	0/1:14,21:36:37.35:113,0,37	1/1:31,0:31:14.63:699,15,0	0/0:31,0:31:48.09:0,48,671	0/0:15,0:15:5.80:0,6,39	1/1:27,0:26:34.18:572,34,0	0/1:18,5:22:5.77:350,0,6	0/1:24,0:24:13.16:13,0,431	1/1:19,16:36:3.01:68,3,0	0/0:19,0:19:36.12:0,36,534	0/0:21,0:21:22.61:0,23,306	0/0:29,0:30:36.12:0,36,536	0/0:35,0:35:58.04:0,58,806	0/0:30,0:30:53.52:0,54,454	0/0:38,0:38:58.71:0,59,461	./.
chr10	3249108	.	TA	T	1687.77	PASS	AB=0.969;AC=7;AF=0.130;AN=54;BaseQRankSum=11.037;DP=699;FS=15.968;HRun=1;HaplotypeScore=129.6657;InbreedingCoeff=0.7365;MQ=52.10;MQ0=41;MQRankSum=-10.729;QD=17.58;ReadPosRankSum=3.063;VQSLOD=2.7943;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:30,1:28:8.09:8,0,264	0/0:12,0:12:14.90:0,15,233	./.	0/0:19,0:1:3.01:0,3,42	0/0:37,0:36:38.03:0,38,562	0/0:20,0:19:50.64:0,51,732	0/0:29,0:26:69.23:0,69,1067	0/0:38,0:30:90.29:0,90,1342	0/0:18,0:18:54.18:0,54,853	0/0:29,0:25:75.25:0,75,1165	0/0:22,0:22:64.45:0,64,959	0/0:31,0:31:39.13:0,39,571	0/0:34,0:34:99:0,102,1383	0/0:36,0:36:45.15:0,45,669	0/0:32,0:32:85.81:0,86,1146	0/0:33,0:33:97.55:0,98,1449	1/1:1,11:12:9.03:119,9,0	0/0:23,0:22:46.51:0,47,757	0/0:21,0:18:51.16:0,51,709	0/0:23,0:22:62.70:0,63,938	0/0:30,0:30:42.12:0,42,600	0/0:23,0:22:61.45:0,61,932	0/0:18,0:17:51.17:0,51,804	0/0:30,0:30:70.44:0,70,1031	0/0:31,0:31:87.27:0,87,1287	1/1:1,22:23:18.22:779,18,0	1/1:1,29:30:71.90:920,72,0	0/0:1,0:1:3.01:0,3,48
chr10	3249120	.	TAGATA	T	2622.62	PASS	AB=0.538;AC=5;AF=0.089;AN=56;BaseQRankSum=9.761;DP=694;FS=15.139;HRun=0;HaplotypeScore=167.6779;InbreedingCoeff=0.6100;MQ=53.10;MQ0=18;MQRankSum=-10.440;QD=43.71;ReadPosRankSum=2.960;VQSLOD=2.6891;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:25:29.53:0,30,169	0/0:12,0:12:14.69:0,15,327	0/0:16,0:7:4.03:0,4,247	0/0:13,0:4:4.38:0,4,125	0/0:36,0:35:34.87:0,35,644	0/0:24,0:23:61.15:0,61,1363	0/0:30,0:27:72.23:0,72,1712	0/0:38,0:36:99:0,108,1956	0/0:18,0:18:54.18:0,54,1546	0/0:32,0:28:84.29:0,84,1956	0/0:25,0:25:72.70:0,73,1627	0/0:29,0:29:33.11:0,33,548	0/0:30,0:30:90.31:0,90,2151	0/0:37,0:37:48.12:0,48,908	0/0:30,0:30:81.94:0,82,1945	0/0:33,0:33:96.79:0,97,2289	1/1:1,9:11:9.03:175,9,0	0/0:25,0:25:37.28:0,37,1290	0/0:18,0:16:48.16:0,48,1096	0/0:30,0:29:82.22:0,82,1791	0/0:30,0:30:45.15:0,45,725	0/0:22,0:22:60.68:0,61,1551	0/0:20,0:19:57.19:0,57,1470	0/0:27,0:27:60.68:0,61,1550	0/0:30,0:30:80.91:0,81,2103	0/1:3,17:21:80.53:1155,0,81	1/1:0,26:28:65.78:1415,66,0	0/0:1,0:1:3.01:0,3,86
chr10	3249161	.	TGATAGATAGATAGATA	T	180.62	PASS	AC=4;AF=0.074;AN=54;BaseQRankSum=2.082;DP=658;FS=1.792;HRun=0;HaplotypeScore=313.9470;InbreedingCoeff=0.6429;MQ=60.00;MQ0=2;MQRankSum=-2.331;QD=6.45;ReadPosRankSum=0.283;VQSLOD=1.7158;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:17,4:18:1.88:256,2,0	0/0:11,0:11:21.07:0,21,1345	0/0:33,0:19:12.01:0,12,204	0/0:14,0:9:3.01:0,3,46	0/0:24,0:23:54.18:0,54,3002	0/0:29,0:29:69.24:0,69,4109	0/0:21,0:20:42.14:0,42,2007	0/0:35,0:34:57.14:0,57,638	0/0:17,0:17:39.13:0,39,2473	0/0:33,0:33:72.25:0,72,3721	0/0:29,0:29:78.27:0,78,3865	0/0:28,0:28:66.23:0,66,3858	0/0:30,0:30:66.23:0,66,3056	0/0:32,0:32:69.24:0,69,4157	0/0:33,0:32:47.84:0,48,1207	0/0:32,0:33:87.27:0,87,4390	1/1:7,0:7:4.04:12,4,0	0/0:13,0:13:30.10:0,30,732	0/0:15,0:15:39.13:0,39,1681	0/0:31,0:32:84.29:0,84,4667	0/0:23,0:22:50.38:0,50,3004	0/0:25,0:25:66.22:0,66,3496	0/0:25,0:25:66.21:0,66,3550	0/0:23,0:23:54.19:0,54,3034	0/0:40,0:40:38.81:0,39,1192	0/0:14,0:14:18.06:0,18,527	0/0:17,0:17:6.02:0,6,92	./.
chr10	3249184	.	TA	T	547.08	PASS	AB=0.837;AC=2;AF=0.036;AN=56;BaseQRankSum=5.142;DP=612;FS=6.047;HRun=1;HaplotypeScore=107.5675;InbreedingCoeff=0.2611;MQ=55.87;MQ0=3;MQRankSum=-0.779;QD=10.52;ReadPosRankSum=-2.913;VQSLOD=0.5004;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:17,0:14:3.88:17,0,4	0/0:10,0:10:30.10:0,30,466	0/0:10,0:3:5.99:0,6,69	0/0:4,0:1:0:0,0,0	0/0:25,0:25:75.26:0,75,1169	0/0:31,0:31:93.32:0,93,1463	0/0:17,0:16:48.16:0,48,754	0/1:18,17:31:99:616,0,506	0/0:16,0:16:48.16:0,48,750	0/0:31,0:29:87.29:0,87,1356	0/0:31,0:31:93.29:0,93,1410	0/0:32,0:32:90.31:0,90,1402	0/0:25,0:25:72.25:0,72,1132	0/0:27,0:27:78.27:0,78,1237	0/0:36,0:35:56.80:0,57,844	0/0:32,0:32:91.18:0,91,1408	0/0:5,0:5:7.28:0,7,127	0/0:15,0:14:36.12:0,36,549	0/0:13,0:13:36.99:0,37,546	0/0:41,0:41:99:0,121,1855	0/0:19,0:18:53.21:0,53,815	0/0:29,0:29:87.30:0,87,1355	0/0:25,0:25:75.26:0,75,1181	0/0:27,0:27:68.91:0,69,1060	0/0:45,0:43:47.65:0,48,705	0/0:6,0:6:15.05:0,15,225	0/0:5,0:5:11.95:0,12,129	0/0:3,0:3:5.98:0,6,64
chr10	3249196	.	T	TA	456.35	PASS	AB=0.721;AC=3;AF=0.054;AN=56;BaseQRankSum=-2.476;DP=615;FS=2.085;HRun=1;HaplotypeScore=110.7751;InbreedingCoeff=-0.0663;MQ=54.67;MQ0=4;MQRankSum=0.857;QD=5.25;ReadPosRankSum=-1.996;VQSLOD=-0.1379;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,1:19:13.67:0,14,123	0/0:11,0:11:33.11:0,33,461	0/0:13,0:6:14.87:0,15,152	0/0:5,0:2:6.01:0,6,69	0/0:30,0:30:90.26:0,90,1221	0/0:32,0:32:96.30:0,96,1324	0/0:14,0:13:39.13:0,39,545	0/0:34,0:30:90.25:0,90,1231	0/0:16,0:16:48.16:0,48,671	0/0:31,1:31:87.29:0,87,1217	0/0:29,0:29:87.29:0,87,1216	0/0:33,0:33:93.31:0,93,1295	0/0:21,0:21:63.21:0,63,877	0/0:24,0:24:72.24:0,72,1002	0/1:18,12:29:99:247,0,237	0/0:29,1:30:39.12:0,39,1070	0/0:7,1:8:11.77:0,12,204	0/1:10,4:13:56.37:56,0,344	0/0:10,0:10:27.06:0,27,352	0/0:48,0:48:99:0,141,1951	0/0:16,2:17:46.65:0,47,669	0/0:30,0:30:90.30:0,90,1258	0/0:25,0:25:69.23:0,69,965	0/0:25,0:25:63.19:0,63,881	0/1:22,21:41:99:253,0,168	0/0:9,0:9:24.07:0,24,320	0/0:6,0:5:15.05:0,15,208	0/0:5,0:5:9.03:0,9,126
chr10	3249228	.	AG	A	716.64	PASS	AB=0.865;AC=8;AF=0.143;AN=56;BaseQRankSum=9.700;DP=645;FS=6.493;HRun=1;HaplotypeScore=115.3939;InbreedingCoeff=0.7165;MQ=63.22;MQ0=2;MQRankSum=-0.642;QD=10.54;ReadPosRankSum=0.803;VQSLOD=1.4804;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,1:20:43.79:0,44,658	0/0:14,0:14:42.14:0,42,671	0/0:30,0:27:69.19:0,69,1024	0/0:10,0:8:24.01:0,24,313	0/0:32,0:32:96.33:0,96,1534	0/0:34,0:34:99:0,102,1631	0/1:12,0:12:8.13:8,0,444	0/0:44,0:44:99:0,129,2003	0/0:15,0:15:45.15:0,45,719	0/0:35,0:34:99:0,102,1630	0/0:22,0:22:66.23:0,66,1055	0/0:27,0:27:81.28:0,81,1284	0/0:27,0:27:75.23:0,75,1165	0/0:20,0:20:60.19:0,60,932	0/0:27,0:26:50.90:0,51,751	0/0:19,0:19:57.19:0,57,909	1/1:10,0:10:14.99:128,15,0	0/0:12,0:11:29.68:0,30,404	0/0:13,0:13:39.13:0,39,624	0/0:46,0:46:99:0,138,2203	0/0:19,0:19:48.12:0,48,717	0/0:29,0:29:84.29:0,84,1335	0/0:22,0:22:66.22:0,66,1046	0/0:23,0:23:59.89:0,60,959	0/0:37,0:35:71.84:0,72,991	0/1:12,7:19:44.69:329,0,45	1/1:10,6:16:41.48:283,41,0	1/1:6,5:11:21.12:119,21,0
chr10	3249231	.	A	AG	1082.45	PASS	AB=0.741;AC=7;AF=0.125;AN=56;BaseQRankSum=10.497;DP=648;FS=5.208;HRun=0;HaplotypeScore=113.3866;InbreedingCoeff=0.8313;MQ=63.33;MQ0=2;MQRankSum=-1.863;QD=17.46;ReadPosRankSum=0.981;VQSLOD=5.4805;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,1:21:34.86:0,35,515	0/0:14,0:14:42.14:0,42,587	0/0:32,0:28:74.87:0,75,968	0/0:9,0:8:24.03:0,24,292	0/0:32,0:32:96.32:0,96,1342	0/0:34,0:34:99:0,102,1427	0/0:11,0:11:30.06:0,30,402	0/0:43,0:43:99:0,120,1646	0/0:15,0:15:45.15:0,45,629	0/0:35,0:35:99:0,102,1427	0/0:22,0:22:66.21:0,66,907	0/0:28,0:27:81.25:0,81,1115	0/0:26,0:26:75.25:0,75,1045	0/0:20,0:20:60.14:0,60,784	0/0:21,1:21:48.05:0,48,607	0/0:18,0:18:54.18:0,54,755	1/1:11,0:11:18.05:201,18,0	0/0:12,0:11:19.62:0,20,255	0/0:14,0:14:39.13:0,39,546	0/0:46,0:46:99:0,138,1929	0/0:19,0:19:48.13:0,48,651	0/0:29,0:29:87.29:0,87,1214	0/0:23,0:23:66.22:0,66,923	0/0:23,0:23:60.17:0,60,838	0/0:33,4:35:63.04:0,63,793	0/1:13,7:20:30.53:422,0,31	1/1:13,6:18:52.17:421,52,0	1/1:6,6:12:26.21:187,26,0
chr10	3249242	.	G	GAGAT	2557.96	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-7.045;DP=637;FS=2.035;HRun=0;HaplotypeScore=140.8145;InbreedingCoeff=0.9766;MQ=62.95;MQ0=2;MQRankSum=0.012;QD=37.62;ReadPosRankSum=-0.133;VQSLOD=3.6649;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:20.99:0,21,504	0/0:14,0:14:33.11:0,33,535	0/0:35,0:29:29.78:0,30,512	0/0:10,0:8:10.33:0,10,78	0/0:35,0:35:87.29:0,87,1430	0/0:34,0:34:69.21:0,69,1083	0/0:11,0:11:27.08:0,27,428	0/0:37,0:37:57.17:0,57,855	0/0:11,0:11:24.08:0,24,401	0/0:37,0:36:84.27:0,84,1340	0/0:17,0:17:39.12:0,39,606	0/0:32,0:31:75.23:0,75,1194	0/0:28,0:28:75.18:0,75,1151	0/0:17,0:17:30.09:0,30,480	1/1:8,17:25:39.13:967,39,0	0/0:15,0:15:36.10:0,36,534	0/0:11,0:11:18.06:0,18,302	1/1:5,6:10:24.04:469,24,0	0/0:15,0:15:24.08:0,24,403	0/0:44,0:45:99:0,108,1683	0/0:14,0:14:33.11:0,33,554	0/0:29,0:29:69.22:0,69,1110	0/0:21,0:21:39.13:0,39,651	0/0:22,0:22:45.13:0,45,744	1/1:5,25:31:51.18:1264,51,0	0/0:23,0:23:63.22:0,63,1052	0/0:25,0:24:75.21:0,75,1177	0/0:12,0:12:27.09:0,27,453
chr10	3249260	.	AATAG	A	570.96	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.337;DP=626;FS=2.966;HRun=0;HaplotypeScore=146.5616;InbreedingCoeff=0.9709;MQ=62.54;MQ0=2;MQRankSum=-3.387;QD=30.05;ReadPosRankSum=-1.236;VQSLOD=3.6442;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,12:19:44.54:666,45,0	0/0:14,0:14:39.13:0,39,956	0/0:41,0:33:36.39:0,36,970	0/0:19,0:15:22.11:0,22,335	0/0:37,0:37:99:0,108,2582	0/0:28,0:28:69.22:0,69,1666	0/0:11,0:11:33.11:0,33,837	0/0:35,0:35:87.27:0,87,1806	0/0:11,0:11:33.11:0,33,748	0/0:36,0:35:99:0,99,2417	0/0:16,0:16:42.14:0,42,971	0/0:28,0:27:72.25:0,72,1801	0/0:27,0:27:72.25:0,72,1856	0/0:15,0:15:39.13:0,39,973	0/0:17,0:17:42.14:0,42,1014	0/0:12,0:12:30.10:0,30,786	0/0:12,0:12:21.07:0,21,519	0/0:10,0:9:24.07:0,24,492	0/0:16,0:16:48.11:0,48,1051	0/0:39,0:39:99:0,99,2530	0/0:15,0:15:42.14:0,42,971	0/0:26,0:26:66.21:0,66,1668	0/0:14,0:14:39.13:0,39,987	0/0:21,0:21:51.17:0,51,1248	0/0:33,0:32:69.22:0,69,1570	0/0:27,0:27:78.27:0,78,1903	0/0:32,0:31:93.31:0,93,2239	0/0:15,0:15:14.13:0,14,705
chr10	3249345	.	TAGATAGA	T	5590.66	PASS	AB=0.986;AC=25;AF=0.463;AN=54;BaseQRankSum=-14.398;DP=530;FS=4.435;HRun=0;HaplotypeScore=155.1830;InbreedingCoeff=-0.0182;MQ=58.28;MQ0=5;MQRankSum=1.413;QD=13.98;ReadPosRankSum=-12.779;VQSLOD=0.5428;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:7,13:20:0.63:58,1,0	0/1:13,0:13:15.71:39,0,16	1/1:9,0:5:15.05:221,15,0	./.	0/1:26,0:26:99:115,0,453	0/1:31,0:31:99:426,0,710	0/1:16,0:16:99:243,0,109	1/1:40,0:37:99:1447,103,0	0/1:19,1:20:49.18:49,0,123	0/1:26,1:27:99:470,0,126	0/0:11,0:11:10.17:0,10,65	0/0:24,0:24:25.57:0,26,170	0/0:19,0:19:18.76:0,19,180	0/0:20,0:20:17.85:0,18,123	0/0:19,0:19:24.60:0,25,166	0/1:25,0:25:99:319,0,556	1/1:7,0:7:18.03:219,18,0	0/1:16,0:18:66.24:118,0,66	1/1:4,7:10:18.06:333,18,0	0/1:14,0:13:38.95:39,0,65	1/1:22,0:22:42.14:743,42,0	0/0:12,0:12:9.38:0,9,61	0/0:6,0:6:12.38:0,12,83	0/0:18,0:18:23.78:0,24,165	0/1:19,0:19:7.76:8,0,51	0/1:38,0:38:99:409,0,812	0/1:27,0:27:99:245,0,602	0/1:17,0:17:90.45:90,0,634
chr10	3249349	.	TAGA	T	10852.36	PASS	AB=0.891;AC=45;AF=0.833;AN=54;BaseQRankSum=-11.885;DP=519;FS=9.579;HRun=0;HaplotypeScore=102.8920;InbreedingCoeff=-0.2059;MQ=58.82;MQ0=4;MQRankSum=0.956;QD=20.91;ReadPosRankSum=-6.848;VQSLOD=2.1455;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:17:0.27:41,0,0	1/1:1,13:14:9.03:145,9,0	1/1:6,3:5:15.05:221,15,0	./.	0/1:24,1:25:99:282,0,116	0/1:31,0:31:99:566,0,158	0/1:16,0:16:11.47:267,0,11	1/1:41,0:40:99:1673,116,0	1/1:2,18:20:30.10:478,30,0	1/1:1,27:28:78.26:1220,78,0	1/1:0,11:11:12.04:200,12,0	1/1:0,24:24:30.10:495,30,0	0/1:2,17:19:1.28:279,0,1	1/1:1,19:20:17.96:300,18,0	1/1:0,19:19:27.09:450,27,0	0/1:25,0:25:99:418,0,119	1/1:6,1:7:18.06:260,18,0	0/1:8,10:18:4.76:321,0,5	1/1:9,0:8:18.05:240,18,0	1/1:1,13:13:18.06:295,18,0	1/1:23,1:24:47.53:687,48,0	1/1:0,13:13:8.75:149,9,0	1/1:0,6:6:11.88:200,12,0	1/1:0,16:16:24.08:400,24,0	1/1:3,16:19:15.05:246,15,0	0/1:32,2:34:99:598,0,149	0/1:23,0:23:99:276,0,120	0/1:16,1:17:99:145,0,162
chr10	3249352	.	A	AT	11370.56	PASS	AC=54;AF=1.000;AN=54;BaseQRankSum=-2.961;DP=528;FS=3.050;HRun=0;HaplotypeScore=85.7922;InbreedingCoeff=0.0449;MQ=61.68;MQ0=3;MQRankSum=2.225;QD=21.58;ReadPosRankSum=1.201;VQSLOD=6.3794;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:16:0.44:41,0,0	1/1:13,0:13:6.38:54,6,0	1/1:8,2:7:18.06:262,18,0	./.	1/1:1,23:24:43.70:654,44,0	1/1:0,31:31:84.29:1290,84,0	1/1:1,14:16:39.13:599,39,0	1/1:3,46:49:99:1847,131,0	1/1:19,0:19:15.69:54,16,0	1/1:29,0:29:63.04:699,63,0	1/1:11,0:11:7.65:33,8,0	1/1:24,0:24:18.70:100,19,0	1/1:17,1:18:12.60:72,13,0	1/1:20,0:20:9.33:23,9,0	1/1:19,0:19:15.22:53,15,0	1/1:1,25:26:72.24:1114,72,0	1/1:1,7:9:18.06:254,18,0	1/1:14,4:18:3.90:165,4,0	1/1:8,0:7:12.51:185,13,0	1/1:14,0:13:12.23:90,12,0	1/1:2,23:25:48.16:709,48,0	1/1:13,0:13:4.21:10,4,0	1/1:6,0:6:5.98:15,6,0	1/1:16,0:16:12.06:30,12,0	1/1:16,0:16:10.92:80,11,0	1/1:2,33:35:96.40:1432,96,0	1/1:1,23:24:51.17:790,51,0	1/1:1,16:17:46.71:715,47,0
chr10	3251943	.	T	TA	3683.83	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-13.747;DP=600;FS=17.114;HRun=9;HaplotypeScore=55.6444;InbreedingCoeff=0.9929;MQ=78.81;MQ0=1;MQRankSum=0.384;QD=27.29;ReadPosRankSum=-0.137;VQSLOD=2.2420;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,16:19:47.96:512,48,0	0/0:11,0:11:26.99:0,27,232	0/0:22,0:22:41.95:0,42,359	0/0:8,0:8:14.42:0,14,102	0/0:25,0:25:59.94:0,60,515	0/0:21,0:21:56.99:0,57,495	0/0:15,0:15:38.99:0,39,338	1/1:4,33:38:76.17:1041,76,0	0/0:19,0:19:53.97:0,54,465	0/0:30,0:30:83.96:0,84,726	0/0:29,0:29:64.99:0,65,549	0/0:15,0:15:35.94:0,36,304	0/0:27,0:27:68.94:0,69,590	0/0:18,0:18:47.95:0,48,412	1/1:5,18:23:51.14:564,51,0	0/0:20,0:20:50.98:0,51,443	1/1:3,14:17:16.12:405,16,0	1/1:2,12:14:36.10:398,36,0	0/0:13,0:13:26.97:0,27,231	0/0:28,0:29:73.99:0,74,627	0/0:21,0:21:56.96:0,57,490	0/0:21,0:21:56.98:0,57,493	0/0:32,0:32:89.97:0,90,781	0/0:12,0:11:23.98:0,24,205	1/1:1,23:24:69.19:763,69,0	0/0:27,0:27:68.96:0,69,593	0/0:30,0:30:74.95:0,75,647	0/0:19,0:19:53.77:0,54,457
chr10	3253189	.	AC	A	2037.62	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=15.777;DP=643;FS=3.439;HRun=2;HaplotypeScore=104.8431;InbreedingCoeff=0.9627;MQ=66.15;MQ0=7;MQRankSum=-2.570;QD=9.30;ReadPosRankSum=-1.005;VQSLOD=1.0622;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:33,0:33:30.52:164,31,0	0/0:8,0:8:23.98:0,24,266	0/0:36,0:19:2.76:0,3,177	0/0:28,0:16:10.51:0,11,198	0/0:27,0:27:59.56:0,60,700	0/0:22,0:22:57.99:0,58,661	0/0:25,0:25:72.06:0,72,777	1/1:8,22:32:59.97:652,60,0	0/0:20,0:20:48.98:0,49,577	0/0:25,0:25:70.70:0,71,822	0/0:24,0:24:62.72:0,63,661	0/0:12,0:12:36.08:0,36,442	0/0:20,0:20:44.23:0,44,541	0/0:15,0:16:34.44:0,34,498	1/1:22,0:22:47.01:265,47,0	0/0:23,0:23:64.05:0,64,796	1/1:12,0:12:16.47:77,16,0	1/1:17,0:18:33.76:192,34,0	0/0:17,0:17:41.94:0,42,486	0/0:37,0:37:99:0,108,1242	0/0:13,0:13:33.09:0,33,422	0/0:26,0:26:66.86:0,67,727	0/0:26,0:26:56.71:0,57,741	0/0:19,0:19:57.04:0,57,702	1/1:25,0:24:31.06:126,31,0	1/1:28,0:29:71.77:378,72,0	1/1:27,0:29:58.18:282,58,0	1/1:16,0:16:24.55:113,25,0
chr10	3253190	.	CCA	C	3849.63	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=15.230;DP=639;FS=2.962;HRun=0;HaplotypeScore=110.1722;InbreedingCoeff=0.8490;MQ=66.91;MQ0=7;MQRankSum=-5.509;QD=17.82;ReadPosRankSum=0.702;VQSLOD=3.9032;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:33,0:33:60.70:649,61,0	0/0:8,0:8:24:0,24,398	0/0:37,0:20:4.02:0,4,343	0/0:28,0:16:0.31:0,0,323	0/0:26,0:26:59.40:0,59,1189	0/0:21,0:21:63.18:0,63,1101	0/0:24,0:24:72.17:0,72,1200	0/1:29,0:29:61.42:129,0,61	0/0:19,0:19:54.17:0,54,984	0/0:25,0:25:75.23:0,75,1344	0/0:24,0:24:66.26:0,66,1060	0/0:13,0:13:39.13:0,39,746	0/0:20,0:20:53.70:0,54,969	0/0:16,0:16:40.16:0,40,793	1/1:16,6:22:40.77:617,41,0	0/0:22,0:22:66.23:0,66,1296	1/1:7,6:12:17.95:178,18,0	1/1:12,6:18:13.79:262,14,0	0/0:18,0:18:51.99:0,52,841	0/0:37,0:37:99:0,111,1944	0/0:13,0:13:33.11:0,33,659	0/0:26,0:26:78.12:0,78,1293	0/0:27,0:27:77.36:0,77,1205	0/0:19,0:19:57.07:0,57,1052	1/1:12,13:24:35.65:318,36,0	1/1:27,3:29:74.93:797,75,0	1/1:25,5:29:61.19:657,61,0	1/1:16,0:16:28.37:243,28,0
chr10	3253191	.	CA	C	2327.79	PASS	AB=1.000;AC=16;AF=0.286;AN=56;BaseQRankSum=14.471;DP=641;FS=2.147;HRun=9;HaplotypeScore=103.9171;InbreedingCoeff=0.7508;MQ=67.61;MQ0=7;MQRankSum=-2.266;QD=10.63;ReadPosRankSum=0.808;VQSLOD=2.8334;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:11,23:34:86.89:758,87,0	0/0:8,0:8:18.05:0,18,208	0/0:36,0:20:0.41:0,0,189	0/0:26,0:14:2.79:0,3,148	0/0:27,0:27:68.06:0,68,710	0/0:21,0:21:54.14:0,54,608	0/0:24,0:24:51.15:0,51,589	0/1:31,0:31:64.69:90,0,65	0/0:20,0:20:54.11:0,54,587	0/0:25,0:25:66.18:0,66,746	0/0:23,0:24:39.56:0,40,546	0/0:13,0:13:39.09:0,39,432	0/0:20,0:20:26.87:0,27,538	0/0:16,0:16:14.96:0,15,421	1/1:22,0:22:29.87:328,30,0	0/0:22,0:22:66.19:0,66,755	1/1:13,0:12:14.25:98,14,0	0/1:18,0:18:22.06:91,0,22	0/0:18,0:18:41.94:0,42,449	0/0:37,0:37:93.10:0,93,1041	0/0:13,0:13:33.10:0,33,381	0/0:27,0:27:74.35:0,74,750	0/0:26,0:26:59.02:0,59,612	0/0:19,0:19:54.13:0,54,603	1/1:25,0:24:34.39:225,34,0	1/1:28,2:29:32.46:430,32,0	1/1:29,1:29:56:396,56,0	1/1:16,0:16:15.17:109,15,0
chr10	3253192	.	A	AC	2091.68	PASS	AB=0.862;AC=13;AF=0.232;AN=56;BaseQRankSum=14.354;DP=643;FS=2.271;HRun=2;HaplotypeScore=107.4478;InbreedingCoeff=0.6653;MQ=67.52;MQ0=7;MQRankSum=-3.578;QD=11.01;ReadPosRankSum=1.948;VQSLOD=2.1255;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:35,0:35:28.54:82,0,29	0/0:9,0:9:24.05:0,24,300	0/0:35,0:19:5.53:0,6,289	0/0:27,0:15:13.29:0,13,262	0/0:28,0:28:73.69:0,74,919	0/0:22,0:22:63.18:0,63,823	0/0:24,0:24:72.14:0,72,881	0/0:31,0:31:76.51:0,77,721	0/0:20,0:20:57.16:0,57,748	0/0:24,0:24:72.22:0,72,963	0/0:24,0:24:61.70:0,62,797	0/0:13,0:13:39.13:0,39,534	0/0:21,0:21:57.10:0,57,754	0/0:16,0:16:45.05:0,45,581	1/1:13,7:21:11.40:354,11,0	0/0:22,0:22:66.22:0,66,918	1/1:10,2:12:17.54:165,18,0	0/1:14,5:19:41.97:149,0,42	0/0:16,0:16:45.13:0,45,587	0/0:37,0:37:99:0,104,1384	0/0:13,0:13:33.11:0,33,457	0/0:27,0:27:79.62:0,80,955	0/0:24,0:24:66.12:0,66,818	0/0:20,0:20:57.17:0,57,753	1/1:15,8:24:35.78:389,36,0	0/1:23,8:30:38.77:358,0,39	1/1:15,14:30:23.27:525,23,0	1/1:3,10:15:18.42:250,18,0
chr10	3254931	.	AGCAACAAGCCCCT	A	6103.22	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=11.230;DP=576;FS=8.573;HRun=0;HaplotypeScore=206.3513;InbreedingCoeff=0.9860;MQ=87.82;MQ0=0;MQRankSum=-11.772;QD=67.07;ReadPosRankSum=2.218;VQSLOD=3.4869;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,14:24:33.07:1195,33,0	0/0:6,0:6:18.06:0,18,1098	0/0:17,0:17:48.16:0,48,2277	0/0:27,0:27:71.77:0,72,3609	0/0:16,0:16:45.15:0,45,2714	0/0:21,0:21:57.18:0,57,3435	0/0:25,0:25:69.23:0,69,4044	0/0:29,0:29:84.27:0,84,4339	0/0:25,0:25:69.24:0,69,3853	0/0:21,0:21:54.17:0,54,3048	0/0:5,0:5:15.04:0,15,596	0/0:21,0:21:60.20:0,60,3591	0/0:20,0:20:54.19:0,54,3288	0/0:31,0:31:90.30:0,90,5629	1/1:2,24:26:60.21:2396,60,0	0/0:23,0:23:66.23:0,66,4040	1/1:5,10:15:12.04:479,12,0	1/1:1,8:9:21.07:839,21,0	0/0:12,0:12:36.12:0,36,1911	0/0:13,0:13:36.12:0,36,1893	0/0:41,0:41:99:0,120,7284	0/0:23,0:23:66.20:0,66,3504	0/0:15,0:15:45.14:0,45,2600	0/0:33,0:33:99:0,99,5778	1/1:8,9:17:30.10:1195,30,0	0/0:15,0:15:42.14:0,42,2420	0/0:33,0:33:99:0,99,5646	0/0:13,0:13:39.13:0,39,2168
chr10	3255299	.	GC	G	1452.78	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.981;DP=711;FS=6.779;HRun=1;HaplotypeScore=81.3617;InbreedingCoeff=0.9976;MQ=82.21;MQ0=0;MQRankSum=-2.854;QD=33.02;ReadPosRankSum=1.741;VQSLOD=3.2309;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,44:44:99:1548,111,0	0/0:9,0:9:27.09:0,27,430	0/0:33,0:33:90.71:0,91,1196	0/0:27,0:26:43.31:0,43,612	0/0:24,0:24:69.19:0,69,1030	0/0:32,0:32:96.31:0,96,1490	0/0:19,0:19:57.16:0,57,856	0/0:23,0:23:69.19:0,69,990	0/0:28,0:28:84.29:0,84,1338	0/0:25,0:25:75.22:0,75,1074	0/0:19,0:19:57.18:0,57,882	0/0:26,0:26:75.18:0,75,1079	0/0:20,0:20:60.16:0,60,902	0/0:27,0:27:81.22:0,81,1217	0/0:35,0:35:99:0,105,1626	0/0:27,0:27:75.22:0,75,1149	0/0:21,0:21:63.18:0,63,953	0/0:27,0:27:78.13:0,78,1138	0/0:16,0:16:45.14:0,45,678	0/0:29,0:29:87.23:0,87,1273	0/0:26,0:26:75.22:0,75,1143	0/0:25,0:25:75.21:0,75,1128	0/0:23,0:23:69.19:0,69,1023	0/0:35,0:35:99:0,105,1625	0/0:25,0:25:75.22:0,75,1135	0/0:22,0:22:27.97:0,28,268	0/0:29,0:29:55.67:0,56,277	0/0:14,0:14:30.13:0,30,151
chr10	3255306	.	AT	A	2108.83	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=7.853;DP=697;FS=11.014;HRun=1;HaplotypeScore=79.2011;InbreedingCoeff=0.9988;MQ=76.04;MQ0=0;MQRankSum=-1.604;QD=34.01;ReadPosRankSum=2.390;VQSLOD=2.7599;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:71.91:0,72,265	0/0:11,0:11:33.07:0,33,415	0/0:28,0:28:75.22:0,75,986	0/0:26,0:22:23.19:0,23,476	0/0:24,0:24:72.18:0,72,944	0/0:33,0:33:96.27:0,96,1310	0/0:19,0:19:57.17:0,57,794	0/0:24,0:24:72.13:0,72,895	0/0:29,0:29:87.26:0,87,1206	0/0:24,0:24:72.16:0,72,923	0/0:19,0:19:57.15:0,57,759	0/0:22,0:22:66.22:0,66,942	0/0:22,0:22:66.16:0,66,869	0/0:26,0:26:78.21:0,78,1041	0/0:34,0:34:99:0,102,1387	0/0:26,0:26:78.22:0,78,1060	0/0:20,0:20:60.18:0,60,832	0/0:26,0:26:59.43:0,59,991	0/0:18,0:18:54.12:0,54,684	0/0:27,0:27:81.20:0,81,1066	0/0:27,0:27:78.17:0,78,1051	0/0:23,0:23:69.19:0,69,932	0/0:20,0:20:60.18:0,60,838	0/0:35,0:35:99:0,105,1400	0/0:31,0:31:93.06:0,93,1232	1/1:0,23:23:66.19:872,66,0	1/1:0,28:28:69.23:962,69,0	1/1:0,11:11:30.10:417,30,0
chr10	3260774	.	TC	T	1735.57	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=11.421;DP=644;FS=4.201;HRun=1;HaplotypeScore=71.5120;InbreedingCoeff=0.9797;MQ=84.54;MQ0=0;MQRankSum=-4.616;QD=29.42;ReadPosRankSum=2.537;VQSLOD=3.5010;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:81.26:0,81,1249	0/0:12,0:12:36.12:0,36,575	0/0:31,0:31:90.18:0,90,1267	0/0:17,1:17:44.93:0,45,609	0/0:30,0:30:90.26:0,90,1410	0/0:26,0:26:78.27:0,78,1243	0/0:29,0:29:87.28:0,87,1358	0/0:36,0:36:99:0,105,1591	0/0:23,0:23:69.20:0,69,1051	0/0:28,0:28:84.28:0,84,1316	0/0:21,0:21:63.21:0,63,1004	0/0:17,0:17:48.15:0,48,743	0/0:25,0:25:75.26:0,75,1198	0/0:29,0:29:87.27:0,87,1344	1/1:0,19:19:54.17:668,54,0	0/0:43,0:43:99:0,129,2033	1/1:2,6:8:15.93:187,16,0	1/1:0,9:9:24.08:297,24,0	0/0:18,0:18:54.16:0,54,820	0/0:19,0:19:57.18:0,57,883	0/0:25,0:24:75.21:0,75,1141	0/0:26,0:26:78.25:0,78,1221	0/0:14,0:14:42.14:0,42,671	0/0:16,0:16:48.16:0,48,766	1/1:0,23:23:60.19:742,60,0	0/0:30,0:30:90.30:0,90,1413	0/0:39,0:39:99:0,117,1841	0/0:3,0:3:9.03:0,9,144
chr10	3262879	.	GGCACTGCTCAGTCCACA	G	453.51	PASS	AB=1.000;AC=4;AF=0.071;AN=56;BaseQRankSum=0.766;DP=636;FS=0.841;HRun=0;HaplotypeScore=276.5181;InbreedingCoeff=0.3624;MQ=68.09;MQ0=0;MQRankSum=0.129;QD=5.60;ReadPosRankSum=-0.961;VQSLOD=2.3108;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,102,5035	0/0:7,0:7:21.05:0,21,1086	0/0:15,0:14:7.52:0,8,294	0/0:11,0:11:29.68:0,30,340	0/0:20,0:20:45.03:0,45,2236	0/0:19,0:19:51.15:0,51,2431	0/0:25,0:25:60.11:0,60,2681	0/0:32,0:32:69.09:0,69,1085	0/0:22,0:22:57.14:0,57,2869	0/0:30,0:29:74.43:0,74,3126	0/0:14,0:14:36.10:0,36,1751	0/0:27,0:27:72.22:0,72,3957	0/0:20,0:20:48.08:0,48,1560	0/0:24,0:24:63.12:0,63,2395	0/0:22,0:22:4.48:0,4,2417	0/0:18,0:18:48.15:0,48,2578	1/1:4,17:21:9.03:424,9,0	0/1:33,0:33:68.72:69,0,3265	0/0:17,0:17:36.10:0,36,1601	0/0:20,0:20:54.11:0,54,2555	0/0:59,0:59:99:0,159,7945	0/0:15,0:15:42.07:0,42,1651	0/0:19,0:19:48.08:0,48,2089	0/0:29,0:29:66.17:0,66,3075	0/1:27,0:27:69.28:69,0,1726	0/0:28,0:28:75.16:0,75,2188	0/0:18,0:18:48.11:0,48,2466	0/0:7,0:7:21.04:0,21,1029
chr10	3263887	.	G	GA	2566.05	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-5.629;DP=694;FS=0.443;HRun=7;HaplotypeScore=71.9280;InbreedingCoeff=0.9927;MQ=71.73;MQ0=0;MQRankSum=1.240;QD=25.92;ReadPosRankSum=2.648;VQSLOD=4.3870;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:69.10:0,69,666	0/0:14,0:14:36.05:0,36,348	0/0:16,0:16:13.25:0,13,193	0/0:15,0:15:29.98:0,30,272	0/0:26,0:26:51.05:0,51,490	0/0:28,0:28:72.11:0,72,695	0/0:21,0:21:54.08:0,54,521	0/0:33,0:33:78.09:0,78,744	0/0:22,1:23:26.88:0,27,543	0/0:24,0:24:57.08:0,57,550	0/0:19,0:19:48.07:0,48,463	0/0:34,0:34:93.14:0,93,896	0/0:31,0:31:90.14:0,90,868	0/0:26,0:26:63.09:0,63,608	1/1:3,26:29:72.21:846,72,0	0/0:34,0:34:84.13:0,84,811	1/1:4,28:32:69.21:832,69,0	1/1:1,12:13:30.09:362,30,0	0/0:13,0:13:33.04:0,33,314	0/0:37,0:37:96.08:0,96,912	0/0:24,0:24:63.10:0,63,608	0/0:20,0:20:51.07:0,51,491	0/0:22,0:22:38.99:0,39,365	0/0:25,0:25:69.10:0,69,660	1/1:5,20:25:57.17:687,57,0	0/0:24,0:24:72.12:0,72,695	0/0:43,0:43:99:0,111,1070	0/0:14,0:14:42.07:0,42,406
chr10	3266137	.	G	GA	4848.69	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-6.742;DP=733;FS=4.604;HRun=1;HaplotypeScore=73.3966;InbreedingCoeff=0.9999;MQ=87.93;MQ0=0;MQRankSum=-2.930;QD=43.68;ReadPosRankSum=4.648;VQSLOD=4.8479;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,129,1656	0/0:11,0:11:33.09:0,33,412	0/0:30,0:30:79.87:0,80,952	0/0:24,0:24:69.01:0,69,814	0/0:31,0:31:93.27:0,93,1176	0/0:22,0:22:66.21:0,66,857	0/0:23,0:23:66.21:0,66,857	0/0:37,0:37:99:0,105,1320	0/0:34,0:34:93.30:0,93,1207	0/0:14,0:14:39.13:0,39,506	0/0:16,0:16:48.16:0,48,623	0/0:23,0:23:69.21:0,69,881	0/0:38,0:38:99:0,111,1423	0/0:29,0:29:84.26:0,84,1076	1/1:1,28:29:81.27:1214,81,0	0/0:36,0:36:99:0,108,1371	1/1:0,30:30:87.29:1304,87,0	1/1:0,18:18:54.18:809,54,0	0/0:23,0:23:66.19:0,66,830	0/0:29,0:29:84.27:0,84,1090	0/0:14,0:14:42.14:0,42,545	0/0:27,0:27:78.25:0,78,1011	0/0:18,0:18:48.16:0,48,622	0/0:21,0:21:63.18:0,63,802	1/1:0,34:34:99:1521,102,0	0/0:23,0:23:69.22:0,69,895	0/0:38,0:38:99:0,111,1412	0/0:18,0:18:51.01:0,51,563
chr10	3266431	.	TCACA	T	1172.22	PASS	AB=0.896;AC=9;AF=0.161;AN=56;BaseQRankSum=2.073;DP=740;FS=28.895;HRun=0;HaplotypeScore=149.6957;InbreedingCoeff=0.4759;MQ=49.99;MQ0=25;MQRankSum=1.610;QD=9.09;ReadPosRankSum=0.138;VQSLOD=1.2024;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:47,0:45:99:228,0,101	0/1:6,0:6:28.93:29,0,154	0/0:22,0:5:12.02:0,12,181	0/0:23,0:8:15.51:0,16,190	0/0:19,0:19:32.98:0,33,512	0/0:25,0:24:28.90:0,29,482	0/0:38,0:37:57.64:0,58,889	1/1:12,0:11:0.40:1,0,0	0/0:28,0:28:56.95:0,57,957	0/0:25,0:25:59.80:0,60,879	0/0:16,0:15:27.09:0,27,435	0/0:34,0:34:66.22:0,66,1103	0/0:39,0:38:69.54:0,70,1200	0/0:25,0:25:24.06:0,24,594	0/0:46,0:45:23.71:0,24,311	0/0:23,0:23:48.73:0,49,812	0/0:21,0:22:20.23:0,20,251	0/0:16,0:14:9.01:0,9,94	0/0:14,0:14:31.81:0,32,476	0/0:18,0:18:18.49:0,18,300	0/0:52,0:50:33.73:0,34,1103	0/0:27,0:26:29.38:0,29,392	0/0:31,0:30:41.98:0,42,598	0/0:34,0:31:43.59:0,44,767	0/0:33,0:30:7.88:0,8,91	0/1:17,14:31:85.69:416,0,86	1/1:22,0:21:16.86:386,17,0	1/1:10,0:10:18:252,18,0
chr10	3266476	.	C	CACAGGCACAT	2795.38	PASS	AB=1.000;AC=7;AF=0.130;AN=54;BaseQRankSum=8.189;DP=797;FS=4.558;HRun=0;HaplotypeScore=253.1064;InbreedingCoeff=0.8166;MQ=69.11;MQ0=10;MQRankSum=-6.863;QD=18.64;ReadPosRankSum=-4.347;VQSLOD=1.7597;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:90.29:0,90,2456	0/0:10,0:10:24.08:0,24,609	0/1:58,0:26:25.82:26,0,526	0/0:78,0:52:8.27:0,8,981	0/0:20,0:20:48.15:0,48,1246	0/0:25,0:25:45.07:0,45,885	0/0:30,0:30:60.15:0,60,1471	0/0:28,0:28:57.14:0,57,1308	0/0:23,0:23:53.72:0,54,1427	0/0:24,0:24:54.17:0,54,1405	0/0:17,0:17:39.12:0,39,961	0/0:41,0:41:99:0,111,2832	0/0:27,0:26:48.14:0,48,1305	0/0:25,0:25:63.19:0,63,1713	1/1:43,5:48:47.66:1452,48,0	0/0:17,0:17:42.07:0,42,1043	1/1:17,2:19:31.63:696,32,0	./.	0/0:18,0:18:27.09:0,27,720	0/0:20,0:20:45.15:0,45,1296	0/0:53,0:53:99:0,111,3039	0/0:23,0:23:60.19:0,60,1645	0/0:21,0:21:51.15:0,51,1295	0/0:32,0:32:66.20:0,66,1595	1/1:25,0:25:32.38:769,32,0	0/0:29,0:29:75.23:0,75,1889	0/0:25,0:25:54.18:0,54,1527	0/0:12,0:12:30.05:0,30,738
chr10	3266561	.	TA	T	3894.55	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=14.493;DP=763;FS=16.256;HRun=2;HaplotypeScore=87.1516;InbreedingCoeff=0.9999;MQ=81.42;MQ0=0;MQRankSum=-1.761;QD=34.16;ReadPosRankSum=2.530;VQSLOD=2.2188;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:84.28:0,84,1259	0/0:14,0:14:39.13:0,39,585	0/0:23,0:23:63.16:0,63,872	0/0:19,0:19:45.14:0,45,624	0/0:27,0:27:81.23:0,81,1168	0/0:32,0:32:90.23:0,90,1298	0/0:17,0:17:51.16:0,51,743	0/0:33,0:33:93.31:0,93,1375	0/0:33,0:33:96.33:0,96,1436	0/0:31,0:31:93.30:0,93,1360	0/0:20,0:20:51.17:0,51,764	0/0:32,0:32:90.26:0,90,1305	0/0:50,0:50:99:0,151,2247	0/0:35,0:35:99:0,99,1482	1/1:0,40:39:99:1324,102,0	0/0:22,0:22:63.21:0,63,944	1/1:0,32:32:87.28:1129,87,0	1/1:0,13:13:33.11:428,33,0	0/0:21,0:21:56.85:0,57,785	0/0:21,0:21:63.20:0,63,924	0/0:45,0:45:99:0,132,1973	0/0:22,0:22:66.22:0,66,989	0/0:19,0:19:57.19:0,57,854	0/0:32,0:32:90.29:0,90,1330	1/1:1,28:29:78.25:1013,78,0	0/0:37,0:37:99:0,105,1535	0/0:23,0:23:69.23:0,69,1034	0/0:13,0:13:36.12:0,36,540
chr10	3268302	.	TA	T	3143.33	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=10.860;DP=610;FS=13.679;HRun=4;HaplotypeScore=56.4242;InbreedingCoeff=0.9712;MQ=76.53;MQ0=0;MQRankSum=-1.784;QD=34.93;ReadPosRankSum=2.583;VQSLOD=3.0204;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:57.19:0,57,849	0/0:10,0:10:30.10:0,30,450	0/0:17,0:16:39.11:0,39,540	0/0:15,0:15:35.56:0,36,475	0/0:29,0:29:87.26:0,87,1244	0/0:18,0:18:54.17:0,54,786	0/0:20,0:20:60.16:0,60,873	0/0:29,0:29:87.23:0,87,1224	0/0:20,0:20:60.20:0,60,898	0/0:37,0:37:99:0,108,1579	0/0:25,0:25:75.25:0,75,1105	0/0:22,0:22:66.22:0,66,988	0/0:25,0:25:75.23:0,75,1084	0/0:18,0:18:54.18:0,54,809	1/1:0,30:30:84.27:1091,84,0	0/0:22,0:22:66.21:0,66,968	1/1:0,20:20:57.18:737,57,0	1/1:1,14:15:42.14:541,42,0	0/0:17,0:17:51.17:0,51,759	0/0:36,0:36:99:0,102,1528	0/0:17,0:17:45.14:0,45,650	0/0:19,0:19:54.18:0,54,808	0/0:26,0:26:78.25:0,78,1147	0/0:15,0:15:45.15:0,45,675	1/1:1,24:25:72.23:935,72,0	0/0:25,0:25:75.24:0,75,1105	0/0:34,0:33:99:0,102,1521	0/0:2,0:2:6.02:0,6,90
chr10	3268796	.	TTGAA	T	1260.31	PASS	AB=0.960;AC=5;AF=0.089;AN=56;BaseQRankSum=7.195;DP=659;FS=5.494;HRun=0;HaplotypeScore=112.6287;InbreedingCoeff=0.5920;MQ=80.33;MQ0=4;MQRankSum=0.700;QD=18.00;ReadPosRankSum=1.804;VQSLOD=2.9761;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,1:26:12.85:0,13,1309	0/0:7,0:7:9.03:0,9,214	0/0:39,0:35:6.02:0,6,131	0/0:27,0:23:12.04:0,12,272	1/1:9,21:30:54.18:852,54,0	0/0:40,1:41:45.94:0,46,2045	0/0:14,0:14:18.06:0,18,402	0/0:30,0:29:27.09:0,27,558	1/1:4,12:16:33.11:521,33,0	0/0:19,0:19:33.08:0,33,719	0/0:28,0:28:57.20:0,57,1340	0/0:20,0:20:42.14:0,42,997	0/0:29,1:30:57.18:0,57,1300	0/0:29,0:29:57.18:0,57,1268	0/0:25,0:25:12.04:0,12,206	0/0:32,1:33:24.89:0,25,1547	0/0:11,0:11:8.90:0,9,85	0/0:13,0:12:3.01:0,3,52	0/1:23,1:23:14.25:14,0,667	0/0:27,0:27:36.12:0,36,845	0/0:17,0:17:27.09:0,27,597	0/0:22,0:22:36.10:0,36,762	0/0:11,0:28:42.61:0,43,712	0/0:15,0:15:24.08:0,24,571	0/0:21,0:21:3.01:0,3,52	0/0:30,0:30:57.20:0,57,1351	0/0:27,2:28:21.88:0,22,1469	0/0:8,0:8:18.06:0,18,428
chr10	3268825	.	T	TGAATGAATGAAC	1282.11	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=2.992;DP=630;FS=2.824;HRun=0;HaplotypeScore=198.1490;InbreedingCoeff=0.7647;MQ=65.73;MQ0=7;MQRankSum=-6.140;QD=11.55;ReadPosRankSum=-0.013;VQSLOD=2.8332;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:81.06:0,81,2108	0/0:9,0:9:27.01:0,27,403	0/0:25,0:17:32.89:0,33,305	0/0:19,0:15:33.01:0,33,328	0/0:29,0:29:78.04:0,78,1742	0/0:42,0:42:99:0,108,3033	0/0:14,0:14:30.03:0,30,580	0/1:33,0:32:10.19:10,0,511	0/0:17,0:17:48.04:0,48,944	0/0:19,0:19:45.07:0,45,929	0/0:20,0:20:57.17:0,57,1718	0/0:24,0:24:66.07:0,66,1260	0/0:24,0:24:66.10:0,66,1805	0/0:30,0:30:78.13:0,78,1759	1/1:2,23:28:12.04:620,12,0	0/0:32,0:32:81.18:0,81,2103	1/1:15,0:15:40.83:456,41,0	1/1:2,0:11:3.01:161,3,0	0/0:27,0:26:65.98:0,66,1221	0/0:23,0:23:57.08:0,57,1304	0/0:20,0:20:48:0,48,754	0/0:15,0:15:36.10:0,36,1033	0/0:25,0:25:42.42:0,42,218	0/0:12,0:12:27.08:0,27,834	1/1:3,17:23:3.01:179,3,0	0/0:24,0:24:69.20:0,69,1923	0/0:31,0:30:78.12:0,78,2052	0/0:9,0:9:27.04:0,27,544
chr10	3269397	.	TCCTCTGGGAGC	T	6686.07	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=12.646;DP=653;FS=16.627;HRun=0;HaplotypeScore=212.7724;InbreedingCoeff=0.9997;MQ=78.30;MQ0=0;MQRankSum=-12.367;QD=87.97;ReadPosRankSum=2.592;VQSLOD=3.5586;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,132,6819	0/0:14,0:14:42.14:0,42,2318	0/0:26,0:26:69.24:0,69,3067	0/0:24,0:24:72.25:0,72,3752	0/0:18,0:18:51.18:0,51,2742	0/0:19,0:19:57.20:0,57,3163	0/0:32,0:32:96.33:0,96,5351	0/0:25,0:25:75.26:0,75,3771	0/0:24,0:24:69.22:0,69,3790	0/0:17,0:17:51.18:0,51,2864	0/0:12,0:12:36.12:0,36,1941	0/0:30,0:30:90.31:0,90,5019	0/0:30,0:30:90.30:0,90,4848	0/0:30,0:30:90.31:0,90,4810	1/1:1,21:22:63.22:2265,63,0	0/0:22,0:22:66.23:0,66,3749	1/1:5,17:22:51.17:1715,51,0	1/1:3,10:13:30.10:1088,30,0	0/0:26,0:26:78.23:0,78,3675	0/0:23,0:23:69.24:0,69,3444	0/0:29,0:29:84.29:0,84,4465	0/0:24,0:24:69.24:0,69,3510	0/0:12,0:12:36.12:0,36,2047	0/0:27,0:27:81.28:0,81,4339	1/1:3,16:19:45.15:1619,45,0	0/0:28,0:28:81.25:0,81,4270	0/0:28,0:28:84.27:0,84,4413	0/0:11,0:11:33.11:0,33,1611
chr10	3269451	.	T	TG	2543.96	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=13.125;DP=738;FS=5.811;HRun=5;HaplotypeScore=93.3519;InbreedingCoeff=0.9999;MQ=85.99;MQ0=0;MQRankSum=-8.976;QD=27.65;ReadPosRankSum=1.167;VQSLOD=3.7378;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,138,1463	0/0:15,0:15:39.08:0,39,410	0/0:25,0:25:56.87:0,57,598	0/0:24,0:24:57.14:0,57,603	0/0:22,0:22:60.15:0,60,645	0/0:21,0:21:60.13:0,60,637	0/0:30,0:30:75.17:0,75,798	0/0:29,0:29:78.20:0,78,838	0/0:26,0:26:69.17:0,69,741	0/0:29,0:29:81.20:0,81,864	0/0:20,0:20:54.13:0,54,580	0/0:30,0:30:87.18:0,87,918	0/0:32,0:32:93.23:0,93,999	0/0:30,0:30:84.21:0,84,903	1/1:4,27:31:75.07:908,75,0	0/0:24,0:24:69.17:0,69,742	1/1:3,22:25:54.10:672,54,0	1/1:2,12:14:33.11:434,33,0	0/0:25,0:25:66.16:0,66,709	0/0:25,0:25:66.17:0,66,709	0/0:38,0:38:99:0,102,1085	0/0:24,0:24:63.16:0,63,677	0/0:16,0:16:42.09:0,42,443	0/0:29,0:29:72.18:0,72,774	1/1:3,19:22:54.13:691,54,0	0/0:37,0:37:99:0,111,1192	0/0:32,0:32:87.22:0,87,935	0/0:14,0:14:36.09:0,36,387
chr10	3269552	.	TAA	T	3754.80	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=13.741;DP=707;FS=5.534;HRun=2;HaplotypeScore=101.5930;InbreedingCoeff=0.9999;MQ=83.02;MQ0=0;MQRankSum=-2.435;QD=42.19;ReadPosRankSum=2.640;VQSLOD=3.6257;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,120,2311	0/0:14,0:14:42.14:0,42,808	0/0:19,0:19:53.74:0,54,1004	0/0:23,0:22:45.86:0,46,1030	0/0:35,0:35:99:0,105,2001	0/0:24,0:24:72.24:0,72,1427	0/0:26,0:26:78.24:0,78,1500	0/0:24,0:24:72.21:0,72,1295	0/0:34,0:34:99:0,102,1950	0/0:26,0:26:78.22:0,78,1487	0/0:17,0:17:51.15:0,51,923	0/0:29,0:29:87.30:0,87,1766	0/0:28,0:28:84.26:0,84,1613	0/0:30,0:30:90.28:0,90,1708	1/1:0,23:23:60.20:974,60,0	0/0:25,0:25:75.24:0,75,1479	1/1:0,28:28:69.24:1122,69,0	1/1:0,19:19:48.16:780,48,0	0/0:25,0:25:75.24:0,75,1468	0/0:23,0:23:69.21:0,69,1318	0/0:38,0:38:99:0,111,2202	0/0:30,0:30:90.29:0,90,1716	0/0:11,0:11:33.11:0,33,670	0/0:22,0:22:66.22:0,66,1274	1/1:0,19:19:54.18:879,54,0	0/0:28,0:28:84.28:0,84,1651	0/0:34,0:34:99:0,102,1998	0/0:13,0:13:39.13:0,39,791
chr10	3270455	.	AG	A	2865.95	PASS	AB=0.777;AC=42;AF=0.778;AN=54;BaseQRankSum=-8.330;DP=177;FS=14.320;HRun=5;HaplotypeScore=32.2331;InbreedingCoeff=0.5253;MQ=76.72;MQ0=0;MQRankSum=1.117;QD=20.77;ReadPosRankSum=-1.983;VQSLOD=1.3648;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,9:9:21.06:237,21,0	1/1:0,3:3:9.03:102,9,0	0/1:8,3:8:51.43:77,0,51	0/1:7,3:6:18.79:19,0,96	1/1:1,3:4:9.03:102,9,0	1/1:0,1:1:3.01:34,3,0	1/1:3,16:19:45.06:493,45,0	0/0:15,0:14:19.38:0,19,99	1/1:1,6:7:18.05:204,18,0	1/1:1,1:2:3.01:34,3,0	1/1:1,3:4:9.03:102,9,0	1/1:2,7:9:21.06:237,21,0	1/1:3,2:4:9.03:101,9,0	1/1:1,3:4:9.02:102,9,0	0/0:5,0:5:11.43:0,11,61	1/1:0,8:8:21.06:238,21,0	0/0:10,0:10:0.97:0,1,79	0/0:2,0:2:5.72:0,6,30	1/1:2,3:5:11.90:117,12,0	1/1:1,5:6:11.87:135,12,0	1/1:0,5:5:9.03:102,9,0	1/1:0,4:4:12.03:136,12,0	1/1:0,4:4:12.03:136,12,0	1/1:2,4:6:6.01:65,6,0	0/0:7,0:7:20.47:0,20,117	1/1:0,2:2:6.02:67,6,0	1/1:1,9:10:17.99:190,18,0	./.
chr10	3270889	.	GA	G	904.70	PASS	AB=0.643;AC=9;AF=0.161;AN=56;BaseQRankSum=8.273;DP=218;FS=2.393;HRun=3;HaplotypeScore=35.8474;InbreedingCoeff=0.7523;MQ=69.33;MQ0=1;MQRankSum=-6.057;QD=23.20;ReadPosRankSum=-1.478;VQSLOD=2.6794;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:8:24.08:0,24,340	0/0:4,0:4:12.04:0,12,172	0/0:13,0:7:13.27:0,13,245	0/0:14,0:11:30.07:0,30,384	0/0:10,0:10:30.09:0,30,409	0/0:11,0:11:33.11:0,33,469	0/0:8,0:8:24.08:0,24,341	0/1:4,5:8:6.87:164,0,7	0/0:2,0:2:6.02:0,6,86	0/0:10,0:10:30.09:0,30,411	0/0:4,0:4:12.04:0,12,170	0/0:5,0:5:15.05:0,15,213	0/0:6,0:6:15.05:0,15,215	0/0:8,0:8:21.07:0,21,298	1/1:3,11:14:38.90:438,39,0	0/0:5,0:5:15.04:0,15,198	1/1:0,7:7:18.06:222,18,0	1/1:0,1:1:3.01:35,3,0	0/0:2,0:2:6.02:0,6,84	0/0:4,0:4:12.04:0,12,171	0/0:13,0:13:36.12:0,36,512	0/0:10,0:10:30.09:0,30,412	0/0:5,0:5:15.05:0,15,212	0/0:6,0:6:18.06:0,18,251	1/1:4,4:8:20.63:200,21,0	0/0:9,0:9:27.09:0,27,384	0/0:9,0:9:27.09:0,27,379	0/0:13,0:13:33.11:0,33,474
chr10	3272376	.	CAGAT	C	1212.86	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.855;DP=731;FS=8.681;HRun=0;HaplotypeScore=116.4333;InbreedingCoeff=0.9806;MQ=81.28;MQ0=0;MQRankSum=-8.067;QD=44.92;ReadPosRankSum=-2.535;VQSLOD=3.5880;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:90.31:0,90,2421	0/0:8,0:8:21.05:0,21,510	0/0:26,0:26:75.22:0,75,1837	0/0:18,0:18:45.15:0,45,1127	0/0:35,0:35:90.26:0,90,2305	0/0:27,0:27:75.24:0,75,1956	0/0:26,0:26:78.27:0,78,2095	1/1:4,23:27:69.24:1308,69,0	0/0:28,0:28:84.29:0,84,2265	0/0:22,0:22:63.21:0,63,1617	0/0:23,0:23:69.24:0,69,1815	0/0:18,0:18:51.18:0,51,1377	0/0:18,0:18:54.17:0,54,1360	0/0:22,0:22:63.19:0,63,1532	0/0:47,0:47:99:0,132,3413	0/0:29,0:29:84.29:0,84,2267	0/0:44,0:44:99:0,126,3321	0/0:32,0:32:81.75:0,82,2187	0/0:18,0:18:54.19:0,54,1389	0/0:29,0:29:84.29:0,84,2220	0/0:36,0:36:99:0,105,2833	0/0:37,0:37:99:0,102,2652	0/0:15,0:15:42.13:0,42,1043	0/0:26,0:26:75.26:0,75,2012	0/0:22,0:22:63.22:0,63,1642	0/0:33,0:33:96.31:0,96,2453	0/0:27,0:26:75.24:0,75,1900	0/0:7,0:7:15.05:0,15,402
chr10	3273719	.	GCA	G	164.82	PASS	AB=1.000;AC=7;AF=0.88;AN=8;DP=241;FS=0.000;HRun=0;HaplotypeScore=8.4627;MQ=9.59;MQ0=214;QD=4.12;VQSLOD=1.0290;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	0/1:2,0:1:0:0,0,0	./.	./.	./.	./.	./.	./.	./.	1/1:12,0:1:2.97:20,3,0	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	1/1:10,5:5:14.99:135,15,0	1/1:8,3:3:8.96:76,9,0	./.
chr10	3276274	.	TATG	T	2560.37	PASS	AB=0.846;AC=17;AF=0.304;AN=56;BaseQRankSum=13.124;DP=731;FS=0.000;HRun=0;HaplotypeScore=110.9466;InbreedingCoeff=0.5498;MQ=69.47;MQ0=9;MQRankSum=-3.413;QD=8.62;ReadPosRankSum=-1.281;VQSLOD=2.6030;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:22:5.95:42,6,0	0/0:11,0:11:33.11:0,33,627	0/1:23,0:16:0:0,0,0	0/0:30,0:16:0:0,0,0	0/0:32,2:34:33.10:0,33,1274	0/0:25,0:25:33.09:0,33,594	0/0:20,0:20:21.05:0,21,358	0/0:35,0:35:5.99:0,6,58	0/1:7,18:25:8.96:539,0,9	0/0:30,0:30:45.14:0,45,795	0/0:15,0:15:24.08:0,24,457	0/0:32,0:32:51.17:0,51,955	0/0:39,0:39:81.28:0,81,1543	0/0:20,0:20:24.08:0,24,456	1/1:18,0:35:47.58:331,48,0	0/1:32,2:34:12.06:12,0,1076	0/0:30,0:30:51.17:0,51,961	0/1:9,0:13:14.96:15,0,18	0/0:20,0:19:12.04:0,12,229	0/0:23,0:23:36.11:0,36,653	0/0:27,1:28:6.01:0,6,761	0/0:22,0:22:39.13:0,39,735	0/1:29,2:31:24.08:24,0,827	0/0:20,0:20:30.10:0,30,564	1/1:12,0:34:41.61:289,42,0	1/1:14,18:33:3.03:664,3,0	1/1:13,19:31:45.15:587,45,0	1/1:8,7:15:18.06:235,18,0
chr10	3277739	.	ATCTC	A	318.33	PASS	AB=0.930;AC=10;AF=0.263;AN=38;BaseQRankSum=4.513;DP=541;FS=15.859;HRun=0;HaplotypeScore=86.4556;InbreedingCoeff=0.4464;MQ=60.77;MQ0=14;MQRankSum=-1.608;QD=3.03;ReadPosRankSum=1.003;VQSLOD=0.6193;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:5.97:0,6,45	0/0:5,0:5:12.04:0,12,224	./.	./.	0/0:22,0:22:6.02:0,6,112	./.	0/0:16,0:16:6.02:0,6,116	0/0:34,0:33:1.82:0,2,5	0/1:11,1:12:36.75:37,0,79	0/0:31,0:30:9.03:0,9,162	./.	./.	0/0:19,0:19:12.04:0,12,254	0/0:22,0:21:17.90:0,18,332	1/1:13,0:19:12.01:111,12,0	0/0:18,0:18:17.75:0,18,226	0/0:17,0:17:6.91:0,7,128	./.	0/0:12,0:11:6.02:0,6,118	0/0:29,0:29:0:0,0,0	0/0:22,0:21:24.06:0,24,458	./.	./.	0/1:14,1:15:33.74:34,0,96	1/1:11,0:12:3:28,3,0	1/1:21,4:25:5.30:90,5,0	1/1:17,3:22:12.02:147,12,0	./.
chr10	3279114	.	GGT	G	593.57	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.720;DP=422;FS=22.244;HRun=0;HaplotypeScore=47.4713;InbreedingCoeff=0.9353;MQ=84.36;MQ0=2;MQRankSum=-0.729;QD=31.24;ReadPosRankSum=0.853;VQSLOD=2.6463;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:39.12:0,39,705	0/0:7,0:7:21.07:0,21,406	0/0:13,0:13:33.11:0,33,603	0/0:12,1:13:27.71:0,28,473	0/0:13,0:13:39.13:0,39,744	0/0:13,0:13:39.13:0,39,753	0/0:17,0:17:48.16:0,48,927	0/0:33,0:33:99:0,99,1913	0/0:10,0:10:30.10:0,30,572	0/0:17,0:17:51.17:0,51,972	0/0:9,0:9:27.09:0,27,520	0/0:14,0:14:42.14:0,42,791	0/0:24,0:24:72.25:0,72,1390	0/0:17,0:17:51.17:0,51,984	0/0:16,0:16:48.16:0,48,927	0/0:14,0:14:42.13:0,42,778	1/1:1,18:17:45.15:688,45,0	0/0:29,0:28:84.29:0,84,1622	0/0:18,0:18:54.15:0,54,975	0/0:13,0:13:36.12:0,36,694	0/0:13,0:13:39.13:0,39,741	0/0:9,0:9:27.08:0,27,488	0/0:9,0:9:27.09:0,27,522	0/0:13,0:13:39.13:0,39,753	0/0:8,0:8:24.08:0,24,464	0/0:16,0:16:48.16:0,48,928	0/0:29,0:29:87.30:0,87,1680	0/0:3,0:3:9.03:0,9,174
chr10	3279740	.	TC	T	3535.75	PASS	AC=50;AF=1.000;AN=50;DP=108;FS=0.000;HRun=3;HaplotypeScore=15.3027;InbreedingCoeff=-0.0626;MQ=78.38;MQ0=0;QD=33.04;VQSLOD=2.5119;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,9:9:26.92:311,27,0	1/1:0,3:3:9.03:111,9,0	1/1:1,5:6:16.86:191,17,0	./.	1/1:0,7:7:18.06:223,18,0	1/1:0,4:4:9.03:111,9,0	1/1:0,4:4:12.04:148,12,0	1/1:0,10:10:30.09:371,30,0	./.	1/1:0,3:3:9.03:111,9,0	1/1:0,2:2:3.01:37,3,0	1/1:0,2:2:6.02:74,6,0	1/1:0,2:2:6.02:74,6,0	1/1:0,6:6:18.06:222,18,0	1/1:0,4:4:9.03:111,9,0	1/1:0,3:3:5.85:51,6,0	1/1:0,1:1:3.01:37,3,0	1/1:0,8:8:18.06:218,18,0	1/1:0,5:5:15.05:185,15,0	1/1:0,1:1:3.01:37,3,0	1/1:0,3:3:9.03:112,9,0	1/1:0,2:2:6.02:74,6,0	1/1:0,5:5:12.04:149,12,0	1/1:0,8:8:21.07:260,21,0	1/1:0,4:4:12.04:149,12,0	./.	1/1:2,0:2:5.99:58,6,0	1/1:0,3:3:9.03:111,9,0
chr10	3281229	.	C	CA	541.85	PASS	AB=0.951;AC=17;AF=0.304;AN=56;BaseQRankSum=0.878;DP=552;FS=0.560;HRun=14;HaplotypeScore=89.7666;InbreedingCoeff=-0.1410;MQ=62.29;MQ0=15;MQRankSum=-2.746;QD=1.61;ReadPosRankSum=-1.386;VQSLOD=-0.5769;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:17,30:49:16.44:439,16,0	0/1:8,1:9:9.47:9,0,61	0/1:33,0:15:14.55:15,0,28	0/1:26,0:12:3.81:4,0,29	0/0:32,0:32:4.69:0,5,258	0/0:21,0:21:41.27:0,41,269	0/0:9,0:9:14.71:0,15,96	0/0:25,0:24:18.15:0,18,62	0/1:11,0:12:27.33:27,0,46	0/0:19,0:23:24.64:0,25,195	0/0:15,2:17:2.87:0,3,144	0/0:16,0:17:33.68:0,34,191	0/0:13,0:13:25.98:0,26,160	0/1:14,0:14:6.37:6,0,84	0/1:14,1:14:4.46:20,0,4	0/1:12,5:17:36.04:36,0,152	0/0:15,0:14:9.95:0,10,26	0/1:14,1:14:6.84:7,0,66	0/1:12,1:12:28.21:28,0,92	0/0:24,0:24:43.48:0,43,275	0/0:9,0:7:8.87:0,9,58	0/0:9,0:11:22.51:0,23,132	0/1:18,2:22:11.51:12,0,167	0/1:13,1:15:4.49:4,0,86	0/1:24,1:25:12.31:12,0,49	0/1:30,1:31:11.96:53,0,12	0/1:27,0:27:7.89:19,0,8	0/1:10,0:4:0:0,0,0
chr10	3281239	.	AAAAAC	A	646.77	PASS	AB=1.000;AC=8;AF=0.143;AN=56;BaseQRankSum=5.129;DP=566;FS=3.528;HRun=0;HaplotypeScore=128.0910;InbreedingCoeff=0.1331;MQ=64.14;MQ0=15;MQRankSum=-1.114;QD=3.70;ReadPosRankSum=-2.602;VQSLOD=1.6642;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:50:83.06:0,83,1758	0/0:9,0:9:21.03:0,21,418	0/1:40,0:18:3.34:3,0,191	0/0:30,0:13:16:0,16,279	0/0:28,0:28:75.04:0,75,1543	0/0:23,0:23:54.12:0,54,1202	0/0:9,0:9:24.03:0,24,481	1/1:11,15:25:50.42:597,50,0	0/0:9,0:9:24.03:0,24,485	0/0:21,0:21:60.04:0,60,1115	0/0:19,0:19:41.95:0,42,765	0/0:18,0:18:46.57:0,47,908	0/0:12,0:12:33.11:0,33,798	0/0:13,0:13:30.09:0,30,721	0/1:17,0:16:47.28:47,0,149	0/0:18,0:18:45.12:0,45,1006	0/1:17,0:16:22.50:22,0,87	0/1:14,0:14:3.84:4,0,348	0/0:13,0:12:35.78:0,36,516	0/0:23,0:23:65.99:0,66,1389	0/0:8,0:6:9.02:0,9,247	0/0:12,0:12:32.96:0,33,545	0/0:24,0:23:56.98:0,57,1150	0/0:17,0:16:33.08:0,33,675	0/0:26,0:26:30.12:0,30,511	0/1:33,0:33:62.16:62,0,331	0/1:28,0:28:43.68:44,0,194	0/0:8,0:4:2.97:0,3,20
chr10	3281240	.	AAAAC	A	1054.68	PASS	AB=0.977;AC=8;AF=0.143;AN=56;BaseQRankSum=6.659;DP=570;FS=0.000;HRun=0;HaplotypeScore=118.2326;InbreedingCoeff=0.3227;MQ=64.11;MQ0=15;MQRankSum=-3.030;QD=7.75;ReadPosRankSum=-4.001;VQSLOD=1.4171;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:50:76.67:0,77,1402	0/0:9,0:9:21.01:0,21,341	0/0:40,0:18:6.47:0,6,197	0/0:30,0:13:20.30:0,20,259	0/0:27,0:27:67.78:0,68,1333	0/0:23,0:23:54.03:0,54,1044	0/0:9,0:9:24.04:0,24,435	1/1:23,2:24:51.45:526,51,0	0/0:9,0:9:24.01:0,24,404	0/0:22,0:22:62.95:0,63,991	0/0:19,0:19:41.90:0,42,715	0/0:18,0:18:33.66:0,34,795	0/0:13,0:13:36.08:0,36,684	0/0:13,0:13:30.01:0,30,614	0/1:18,0:17:88.16:93,0,88	0/0:18,0:18:45.13:0,45,863	1/1:17,0:16:4.18:109,4,0	0/1:14,0:14:9.66:10,0,209	0/0:13,0:12:28.74:0,29,503	0/0:24,0:24:68.75:0,69,1226	0/0:9,0:7:12.01:0,12,232	0/0:12,0:12:33.02:0,33,509	0/0:24,0:23:56.93:0,57,974	0/0:17,0:16:33.06:0,33,558	0/0:26,0:26:20.86:0,21,359	0/1:32,2:34:99:279,0,120	0/1:27,1:28:23.07:176,0,23	0/0:8,0:4:2.80:0,3,14
chr10	3281241	.	AAAC	A	1695.82	PASS	AB=0.968;AC=12;AF=0.214;AN=56;BaseQRankSum=9.592;DP=572;FS=0.426;HRun=0;HaplotypeScore=107.0690;InbreedingCoeff=0.5153;MQ=65.94;MQ0=14;MQRankSum=-5.877;QD=10.09;ReadPosRankSum=-2.549;VQSLOD=2.7098;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:49:83.66:0,84,1109	0/0:9,0:9:20.96:0,21,272	0/0:40,0:18:4.96:0,5,177	0/0:32,0:15:20.93:0,21,245	0/0:27,0:27:68.83:0,69,1142	0/0:23,0:23:53.92:0,54,850	0/0:9,0:9:24.03:0,24,378	1/1:24,0:23:51.57:444,52,0	0/0:9,0:9:23.94:0,24,326	0/0:23,0:23:61.75:0,62,828	0/0:19,0:19:41.52:0,42,626	0/0:18,0:18:39.88:0,40,666	0/0:13,0:13:36.04:0,36,563	0/0:13,0:13:29.98:0,30,502	0/1:18,0:17:36.55:122,0,37	0/0:21,0:21:54.05:0,54,778	1/1:15,1:16:29.27:288,29,0	0/1:14,0:14:41.62:42,0,124	0/0:13,0:12:35.63:0,36,464	0/0:24,0:24:61.25:0,61,997	0/0:8,0:7:12.01:0,12,194	0/0:13,0:13:35.45:0,35,447	0/0:24,0:23:56.15:0,56,779	0/0:16,0:15:32.98:0,33,444	0/1:25,0:25:22.26:22,0,191	0/1:29,5:34:19.87:489,0,20	1/1:26,2:28:60:429,60,0	1/1:9,0:5:4.25:29,4,0
chr10	3281242	.	AAC	A	2328.55	PASS	AB=0.947;AC=14;AF=0.250;AN=56;BaseQRankSum=8.955;DP=565;FS=8.948;HRun=0;HaplotypeScore=95.0617;InbreedingCoeff=0.7739;MQ=67.24;MQ0=13;MQRankSum=-7.446;QD=14.03;ReadPosRankSum=-4.047;VQSLOD=1.4411;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:47:83.41:0,83,815	0/0:7,0:7:20.06:0,20,194	0/0:41,0:19:18.03:0,18,181	0/0:32,0:15:16.41:0,16,201	0/0:27,0:27:66.22:0,66,930	0/0:22,0:22:52.95:0,53,671	0/0:8,0:8:24.05:0,24,311	1/1:24,0:23:51.39:388,51,0	0/0:8,0:8:23.13:0,23,248	0/0:23,0:23:32.75:0,33,630	0/0:19,0:19:41.50:0,41,506	0/0:18,0:18:41.42:0,41,509	0/0:14,0:14:39.01:0,39,473	0/0:13,0:13:29.90:0,30,390	1/1:17,1:17:13.41:171,13,0	0/0:21,0:21:54.02:0,54,621	1/1:9,6:15:40.33:413,40,0	0/1:13,1:14:34.92:96,0,35	0/0:13,0:12:34.47:0,34,369	0/0:25,0:25:32.06:0,32,777	0/0:9,0:8:14.99:0,15,181	0/0:13,0:13:22.96:0,23,346	0/0:23,0:22:45.78:0,46,590	0/0:15,0:14:32.62:0,33,348	0/1:24,1:25:42.76:105,0,43	1/1:29,5:34:18.16:658,18,0	1/1:25,3:28:70.50:637,70,0	1/1:8,0:5:5.98:47,6,0
chr10	3281243	.	AC	A	2418.37	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=11.065;DP=548;FS=11.059;HRun=1;HaplotypeScore=84.5910;InbreedingCoeff=0.9139;MQ=68.27;MQ0=9;MQRankSum=-8.911;QD=15.50;ReadPosRankSum=-3.918;VQSLOD=1.6140;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:42:79.70:0,80,547	0/0:7,0:7:7.70:0,8,115	0/0:41,0:19:2.12:0,2,126	0/0:32,0:15:12.12:0,12,154	0/0:27,0:27:63.19:0,63,707	0/0:21,0:21:52.96:0,53,521	0/0:10,0:10:30.01:0,30,290	1/1:20,0:20:49.43:333,49,0	0/0:8,0:8:9.10:0,9,167	0/0:23,0:23:40.61:0,41,507	0/0:19,0:19:38.62:0,39,380	0/0:17,1:18:12.85:0,13,318	0/0:14,0:14:38.89:0,39,364	0/0:12,0:12:29.84:0,30,285	1/1:17,2:18:36.87:279,37,0	0/0:19,1:20:53.59:0,54,469	1/1:14,1:15:44.50:319,45,0	1/1:11,2:13:28.12:200,28,0	0/0:13,0:12:18.04:0,18,249	0/0:25,0:25:29.75:0,30,584	0/0:9,0:8:14.97:0,15,148	0/0:13,0:13:22.69:0,23,278	0/0:23,0:22:42.44:0,42,432	0/0:14,0:14:23.29:0,23,247	1/1:24,1:25:43.89:258,44,0	1/1:29,4:33:33.42:618,33,0	1/1:19,7:26:70.36:564,70,0	1/1:5,0:4:5.98:48,6,0
chr10	3281248	.	ACT	A	567.45	PASS	AB=0.977;AC=6;AF=0.107;AN=56;BaseQRankSum=9.685;DP=523;FS=0.494;HRun=0;HaplotypeScore=97.8188;InbreedingCoeff=0.2762;MQ=71.96;MQ0=8;MQRankSum=-6.224;QD=5.97;ReadPosRankSum=-0.044;VQSLOD=3.0604;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:96.28:0,96,1800	0/0:6,0:6:18.06:0,18,339	0/0:39,0:19:23.91:0,24,441	0/0:33,0:17:19.77:0,20,431	0/0:28,0:28:80.80:0,81,1462	0/0:18,0:18:51.17:0,51,973	0/0:10,0:10:30.10:0,30,565	0/0:22,0:22:55.28:0,55,613	0/0:10,0:10:27.09:0,27,506	0/0:21,0:21:60.21:0,60,1118	0/0:17,0:17:44.44:0,44,790	0/0:19,0:19:48.63:0,49,868	0/0:16,0:16:45.15:0,45,844	0/0:11,0:11:30.10:0,30,578	0/1:16,0:15:7.36:59,0,7	0/0:20,0:20:54.09:0,54,1028	0/1:17,0:17:8.07:121,0,8	0/1:12,0:12:8.39:8,0,83	0/0:14,0:13:33.11:0,33,571	0/0:24,0:24:72.25:0,72,1329	0/0:9,0:8:18.06:0,18,340	0/0:13,0:13:36.12:0,36,654	0/0:21,0:20:54.18:0,54,1019	0/0:13,0:13:33.11:0,33,637	0/0:14,2:16:0.51:0,1,142	0/1:26,3:29:32.36:212,0,32	1/1:17,4:21:35.82:294,36,0	0/0:5,0:4:2.76:0,3,40
chr10	3283230	.	TC	T	2916.68	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=9.905;DP=715;FS=13.891;HRun=2;HaplotypeScore=67.6354;InbreedingCoeff=0.9997;MQ=85.25;MQ0=0;MQRankSum=-1.578;QD=34.31;ReadPosRankSum=3.175;VQSLOD=2.6965;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:87.25:0,87,1276	0/0:14,0:14:42.13:0,42,609	0/0:27,0:27:75.12:0,75,1011	0/0:20,0:20:50.72:0,51,677	0/0:31,0:31:90.30:0,90,1347	0/0:28,0:28:84.27:0,84,1239	0/0:20,0:20:60.19:0,60,880	0/0:28,0:28:81.27:0,81,1196	0/0:33,0:33:99:0,99,1477	0/0:24,0:24:72.24:0,72,1063	0/0:25,0:25:75.25:0,75,1123	0/0:30,0:30:90.30:0,90,1349	0/0:30,0:30:90.30:0,90,1347	0/0:32,0:32:93.28:0,93,1353	1/1:0,33:33:96.31:1247,96,0	0/0:39,0:39:99:0,117,1714	1/1:0,16:16:42.14:545,42,0	1/1:1,15:16:42.14:545,42,0	0/0:11,0:11:27.09:0,27,404	0/0:24,0:24:72.24:0,72,1078	0/0:40,0:40:99:0,117,1750	0/0:27,0:27:81.25:0,81,1174	0/0:16,0:16:45.15:0,45,674	0/0:30,0:30:90.29:0,90,1325	1/1:0,20:20:57.19:740,57,0	0/0:23,0:23:69.23:0,69,1033	0/0:32,0:32:96.30:0,96,1397	0/0:16,0:16:39.13:0,39,584
chr10	3284381	.	GAT	G	8380.39	PASS	AB=0.522;AC=17;AF=0.304;AN=56;BaseQRankSum=19.189;DP=697;FS=1.750;HRun=0;HaplotypeScore=106.3139;InbreedingCoeff=0.9133;MQ=72.61;MQ0=1;MQRankSum=-3.603;QD=37.58;ReadPosRankSum=1.844;VQSLOD=6.8823;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,34:34:87.29:1280,87,0	0/0:15,0:15:45.15:0,45,843	0/0:25,0:25:66.21:0,66,1191	0/0:9,0:9:27.09:0,27,503	0/0:34,0:34:99:0,102,1846	0/0:32,0:32:93.32:0,93,1741	0/0:23,0:23:66.21:0,66,1195	1/1:4,34:38:99:1436,102,0	0/0:33,0:33:96.33:0,96,1797	0/0:26,0:26:75.25:0,75,1378	0/0:28,0:28:81.28:0,81,1516	0/0:25,0:25:72.23:0,72,1316	0/0:30,0:30:84.26:0,84,1510	0/0:24,0:24:69.22:0,69,1254	1/1:0,30:30:84.28:1236,84,0	0/0:35,0:35:99:0,99,1847	1/1:0,17:17:42.14:618,42,0	1/1:1,9:10:21.07:309,21,0	0/0:14,0:14:42.12:0,42,727	0/0:36,0:36:99:0,105,1935	0/0:23,0:23:63.22:0,63,1171	0/0:18,0:17:48.16:0,48,899	0/0:28,0:28:81.74:0,82,1486	0/0:16,0:16:45.14:0,45,811	1/1:2,25:27:75.25:1103,75,0	0/1:2,22:24:40.07:899,0,40	1/1:2,32:34:84.28:1235,84,0	1/1:0,9:9:18.06:265,18,0
chr10	3284657	.	A	AAC	1731.99	PASS	AB=0.953;AC=12;AF=0.214;AN=56;BaseQRankSum=10.027;DP=744;FS=3.719;HRun=0;HaplotypeScore=145.6801;InbreedingCoeff=0.5601;MQ=60.07;MQ0=10;MQRankSum=-6.069;QD=9.41;ReadPosRankSum=-2.917;VQSLOD=2.9855;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:31,1:32:5.97:93,0,6	0/0:10,0:10:18.05:0,18,207	0/0:42,0:23:3.01:0,3,33	0/0:29,0:19:3.01:0,3,34	0/0:25,1:27:19.48:0,19,626	0/0:28,0:28:42.09:0,42,463	0/0:37,0:36:53.77:0,54,723	0/0:27,0:24:21.53:0,22,215	0/0:27,0:31:77.69:0,78,821	0/0:26,0:28:74.85:0,75,801	0/0:19,0:20:35.93:0,36,393	0/0:22,0:22:33.83:0,34,474	0/0:19,0:20:43.51:0,44,466	0/0:26,0:27:72.03:0,72,758	0/0:26,0:27:10.93:0,11,56	0/0:31,0:33:72.02:0,72,789	1/1:15,8:24:33.11:459,33,0	1/1:11,0:11:8.28:30,8,0	0/0:25,0:25:10.08:0,10,200	0/0:20,0:21:50.89:0,51,540	0/0:39,0:44:82.96:0,83,854	0/1:21,1:23:1.64:2,0,396	0/0:20,0:20:44.83:0,45,468	0/0:40,0:41:98.94:0,99,1105	0/1:26,0:25:8.10:8,0,19	0/1:26,4:30:80.94:410,0,81	1/1:19,2:23:24.87:470,25,0	1/1:3,11:15:30.10:424,30,0
chr10	3284691	.	CACAA	C	1250.88	PASS	AB=0.981;AC=10;AF=0.179;AN=56;BaseQRankSum=8.835;DP=780;FS=2.058;HRun=0;HaplotypeScore=176.4532;InbreedingCoeff=0.0479;MQ=59.37;MQ0=15;MQRankSum=-3.334;QD=5.90;ReadPosRankSum=-3.873;VQSLOD=2.0559;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:25:13.24:111,13,0	0/0:12,0:12:36.07:0,36,766	0/0:39,0:21:53.70:0,54,1125	0/0:36,0:24:47.21:0,47,841	0/0:32,0:32:93.28:0,93,2177	0/0:25,0:25:72.22:0,72,1719	0/0:31,0:32:90.79:0,91,2073	0/1:33,0:31:99:341,0,100	0/0:33,0:33:96.19:0,96,2201	0/0:40,0:39:99:0,117,2638	0/0:20,0:20:57.47:0,57,1317	0/0:27,0:27:59.67:0,60,1814	0/0:20,0:20:54.12:0,54,1209	0/0:26,0:26:74.26:0,74,1643	0/1:27,0:26:63.06:100,0,63	0/0:37,0:37:99:0,105,2438	0/1:27,6:33:11.08:572,0,11	0/1:13,0:13:55.93:125,0,56	0/0:25,0:24:69.05:0,69,1237	0/0:22,0:22:60.93:0,61,1341	0/0:54,0:53:99:0,128,2869	0/0:23,0:23:69.15:0,69,1555	0/0:19,0:19:57.19:0,57,1370	0/0:46,0:46:99:0,127,2918	0/1:19,0:17:7.80:8,0,52	0/1:27,0:27:76.29:76,0,460	0/1:19,0:19:57.20:57,0,227	0/1:16,0:15:5.72:6,0,261
chr10	3284693	.	CAA	C	1327.18	PASS	AB=0.979;AC=14;AF=0.250;AN=56;BaseQRankSum=10.484;DP=782;FS=0.000;HRun=3;HaplotypeScore=148.6782;InbreedingCoeff=0.5970;MQ=60.37;MQ0=15;MQRankSum=-5.482;QD=6.35;ReadPosRankSum=-1.969;VQSLOD=-0.6145;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:22,2:24:13.63:112,14,0	0/0:13,0:13:39.02:0,39,580	0/0:38,0:21:53.20:0,53,863	0/0:40,0:27:47.02:0,47,713	0/0:34,0:34:99:0,99,1659	0/0:25,0:25:72.18:0,72,1231	0/0:32,0:32:90.43:0,90,1508	0/1:32,0:30:0.97:381,0,1	0/0:33,0:33:96.19:0,96,1608	0/0:41,0:40:99:0,120,1924	0/0:20,0:20:54:0,54,935	0/0:27,0:27:59.25:0,59,1324	0/0:19,0:19:54.12:0,54,896	0/0:26,0:26:62.19:0,62,1086	1/1:27,0:26:8.02:173,8,0	0/0:36,0:36:99:0,105,1808	1/1:32,0:32:5.74:238,6,0	1/1:13,0:13:11.99:177,12,0	0/0:25,0:24:69.04:0,69,984	0/0:21,0:21:4.36:0,4,819	0/0:53,0:52:99:0,124,2087	0/0:24,0:24:72.19:0,72,1159	0/0:19,0:19:57.16:0,57,951	0/0:47,0:47:99:0,129,2148	1/1:18,0:16:19.51:172,20,0	0/1:27,1:28:99:143,0,201	0/1:18,1:19:34.03:66,0,34	0/1:16,0:15:39.04:39,0,50
chr10	3284695	.	A	ACAC	1019.86	PASS	AB=0.910;AC=8;AF=0.143;AN=56;BaseQRankSum=8.761;DP=777;FS=7.612;HRun=0;HaplotypeScore=163.4088;InbreedingCoeff=0.0908;MQ=61.92;MQ0=15;MQRankSum=-5.313;QD=6.18;ReadPosRankSum=0.433;VQSLOD=2.4585;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:20,2:22:7.53:109,8,0	0/0:14,0:14:39.04:0,39,591	0/0:36,0:21:24.56:0,25,964	0/0:41,0:29:64.83:0,65,897	0/0:32,0:32:96.30:0,96,1651	0/0:24,0:24:69.23:0,69,1216	0/0:30,0:30:87.46:0,87,1491	0/1:34,0:32:99:303,0,150	0/0:34,0:34:96.30:0,96,1651	0/0:41,0:40:99:0,120,1975	0/0:20,0:20:56.54:0,57,971	0/0:28,0:28:78.18:0,78,1363	0/0:20,0:20:54.14:0,54,892	0/0:25,0:25:75.23:0,75,1250	0/0:24,0:23:16.32:0,16,101	0/0:34,0:34:99:0,102,1818	0/1:32,0:34:65.88:66,0,238	0/1:13,0:13:11.78:12,0,118	0/0:27,0:26:75.21:0,75,1158	0/0:21,0:22:66.12:0,66,1045	0/0:51,0:50:99:0,135,2277	0/0:24,0:24:72.23:0,72,1233	0/0:20,0:20:57.19:0,57,993	0/0:46,0:46:99:0,130,2223	0/0:18,0:16:20.72:0,21,121	0/1:26,1:27:99:262,0,256	0/1:14,3:19:26.49:238,0,26	0/1:11,4:15:47.44:166,0,47
chr10	3284769	.	AAGC	A	9983.23	PASS	AB=0.529;AC=17;AF=0.304;AN=56;BaseQRankSum=18.663;DP=669;FS=15.365;HRun=0;HaplotypeScore=108.6808;InbreedingCoeff=0.9142;MQ=62.62;MQ0=2;MQRankSum=-7.928;QD=45.79;ReadPosRankSum=1.693;VQSLOD=6.0311;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,28:30:81.28:1376,81,0	0/0:17,0:17:51.18:0,51,1145	0/0:20,0:18:51.13:0,51,1069	0/0:27,0:24:66.23:0,66,1480	0/0:21,0:21:57.20:0,57,1295	0/0:26,0:26:75.26:0,75,1702	0/0:27,0:27:81.28:0,81,1868	1/1:0,25:24:69.24:1158,69,0	0/0:27,0:27:81.28:0,81,1850	0/0:20,0:20:60.21:0,60,1342	0/0:15,0:15:45.15:0,45,1019	0/0:26,0:26:75.24:0,75,1678	0/0:22,0:22:63.22:0,63,1424	0/0:20,0:20:60.21:0,60,1373	1/1:1,25:26:66.23:1125,66,0	0/0:32,0:32:93.32:0,93,2123	1/1:1,50:51:99:2404,141,0	1/1:1,19:19:57.20:972,57,0	0/0:27,0:27:81.24:0,81,1742	0/0:16,0:16:48.16:0,48,1107	0/0:43,0:43:99:0,120,2722	0/0:20,0:20:60.21:0,60,1365	0/0:12,0:12:36.12:0,36,830	0/0:33,0:33:96.33:0,96,2206	1/1:1,18:18:48.16:806,48,0	0/1:2,16:18:18.05:760,0,18	1/1:0,24:24:66.23:1125,66,0	1/1:0,5:5:15.05:256,15,0
chr10	3284903	.	G	GTC	1277.02	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.095;DP=584;FS=19.529;HRun=0;HaplotypeScore=82.0023;InbreedingCoeff=0.9908;MQ=85.70;MQ0=0;MQRankSum=-5.427;QD=44.04;ReadPosRankSum=-2.715;VQSLOD=2.2905;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:69.23:0,69,1009	0/0:14,0:14:42.14:0,42,618	0/0:26,0:26:66.22:0,66,960	0/0:27,0:27:69.19:0,69,981	0/0:12,0:12:33.10:0,33,467	0/0:12,0:12:36.09:0,36,489	0/0:18,0:18:54.16:0,54,774	1/1:6,23:28:75.25:1372,75,0	0/0:24,0:24:69.22:0,69,995	0/0:14,0:14:42.14:0,42,611	0/0:19,0:19:57.19:0,57,838	0/0:30,0:30:90.30:0,90,1324	0/0:15,0:15:42.11:0,42,595	0/0:21,0:21:63.21:0,63,928	0/0:29,0:29:84.24:0,84,1202	0/0:15,0:15:45.11:0,45,639	0/0:39,0:39:99:0,117,1695	0/0:31,0:31:81.24:0,81,1170	0/0:23,0:23:69.23:0,69,1016	0/0:13,0:13:33.11:0,33,486	0/0:31,0:31:93.30:0,93,1345	0/0:17,0:17:51.17:0,51,750	0/0:11,0:11:30.10:0,30,440	0/0:33,0:33:90.30:0,90,1324	0/0:15,0:15:42.14:0,42,618	0/0:17,0:17:45.15:0,45,663	0/0:19,0:19:57.18:0,57,816	0/0:6,0:6:18.06:0,18,259
chr10	3285105	.	CGTGTGTGTGT	C	680.78	PASS	AB=0.812;AC=5;AF=0.100;AN=50;BaseQRankSum=5.421;DP=641;FS=1.117;HRun=0;HaplotypeScore=180.2319;InbreedingCoeff=0.0648;MQ=64.81;MQ0=20;MQRankSum=-3.258;QD=7.24;ReadPosRankSum=-1.505;VQSLOD=2.1847;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:34,0:33:1.25:3,1,0	0/0:7,0:9:2.60:0,3,10	./.	./.	0/0:16,0:19:9.02:0,9,252	0/0:11,0:11:15.05:0,15,450	0/0:29,0:31:30.57:0,31,1142	0/0:24,0:24:18.88:0,19,286	0/0:22,0:22:27.09:0,27,1219	0/0:21,0:21:14.41:0,14,523	0/0:11,0:11:6:0,6,70	0/0:26,0:29:27.98:0,28,880	0/0:23,0:23:30.56:0,31,1053	0/0:24,0:24:33.11:0,33,1196	0/0:19,0:27:18.03:0,18,587	0/0:22,0:21:23.56:0,24,1048	0/1:19,2:22:13.68:197,0,14	0/0:26,0:25:30:0,30,800	0/0:22,0:19:20.89:0,21,425	0/0:20,0:18:6.02:0,6,290	0/0:33,0:31:36.11:0,36,1319	0/0:19,0:19:3.01:0,3,50	0/0:10,0:10:9.03:0,9,339	0/0:37,0:43:60.17:0,60,2292	0/0:12,0:12:3.01:0,3,129	0/1:16,7:23:99:240,0,115	0/1:11,4:15:27.94:340,0,28	./.
chr10	3285154	.	G	GTGTA	713.02	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=5.311;DP=519;FS=4.048;HRun=0;HaplotypeScore=95.9658;InbreedingCoeff=0.7052;MQ=51.44;MQ0=19;MQRankSum=-5.341;QD=5.06;ReadPosRankSum=-3.433;VQSLOD=1.1167;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:26:0:0,0,0	0/0:15,0:15:38.91:0,39,325	0/0:28,0:15:44.50:0,45,411	0/0:37,0:19:56.60:0,57,475	0/0:14,0:14:24.83:0,25,194	0/0:13,0:13:35.92:0,36,289	0/0:25,0:24:58.30:0,58,614	0/0:12,0:12:29.94:0,30,256	0/0:18,0:18:51.02:0,51,637	0/0:11,0:11:32.92:0,33,281	0/0:7,0:7:17.96:0,18,144	0/0:19,0:18:6.72:0,7,373	0/0:14,0:14:38.25:0,38,381	0/0:21,0:21:23.91:0,24,405	1/1:19,1:20:6.01:107,6,0	0/0:20,0:20:42.46:0,42,444	0/1:20,0:20:3.07:110,0,3	1/1:18,0:16:31.87:259,32,0	0/0:13,0:12:29.88:0,30,265	0/0:10,0:10:29.95:0,30,277	0/0:41,0:37:59.25:0,59,691	0/0:13,0:13:32.92:0,33,264	0/0:8,0:8:20.97:0,21,205	0/0:39,0:39:65.44:0,65,916	1/1:1,14:18:3.01:82,3,0	1/1:20,0:20:20.54:201,21,0	0/1:14,0:14:13.19:69,0,13	1/1:4,0:4:5.98:47,6,0
chr10	3285280	.	A	ATG	4700.77	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=4.580;DP=752;FS=1.144;HRun=0;HaplotypeScore=101.8436;InbreedingCoeff=0.9982;MQ=55.94;MQ0=12;MQRankSum=-1.063;QD=23.62;ReadPosRankSum=4.193;VQSLOD=5.6509;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:38,0:38:77.59:533,78,0	0/0:9,0:9:24.05:0,24,338	0/0:55,0:26:70.16:0,70,1051	0/0:43,0:21:56.53:0,57,852	0/0:20,0:20:54.16:0,54,837	0/0:21,0:21:57.18:0,57,883	0/0:25,0:25:63.20:0,63,989	0/0:40,0:40:99:0,117,1816	0/0:30,0:30:87.27:0,87,1373	0/0:19,0:19:51.16:0,51,812	0/0:18,0:18:54.18:0,54,872	0/0:41,0:41:99:0,102,1598	0/0:30,0:30:90.28:0,90,1423	0/0:26,0:26:75.25:0,75,1177	1/1:3,28:33:50.75:939,51,0	0/0:31,0:31:93.30:0,93,1470	1/1:17,0:17:34.56:149,35,0	1/1:2,27:30:68.61:1302,69,0	0/0:19,0:18:50.51:0,51,749	0/0:21,0:21:48.13:0,48,727	0/0:38,0:38:99:0,111,1691	0/0:17,0:17:48.14:0,48,743	0/0:20,0:20:54.16:0,54,837	0/0:30,0:30:90.15:0,90,1291	1/1:1,18:19:38.84:792,39,0	1/1:31,0:31:18.98:482,19,0	1/1:22,0:21:51.44:334,51,0	1/1:9,0:9:24.77:169,25,0
chr10	3286039	.	GTCCT	G	2875.36	PASS	AB=0.944;AC=15;AF=0.268;AN=56;BaseQRankSum=12.924;DP=459;FS=12.959;HRun=0;HaplotypeScore=93.0055;InbreedingCoeff=0.9067;MQ=81.44;MQ0=0;MQRankSum=-10.991;QD=22.46;ReadPosRankSum=6.063;VQSLOD=1.8571;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:23:33.11:470,33,0	0/0:12,0:12:30.10:0,30,686	0/0:23,0:24:41.52:0,42,953	0/0:18,0:17:13.51:0,14,471	0/0:14,0:14:36.12:0,36,798	0/0:20,0:20:51.17:0,51,1069	0/0:17,0:17:48.16:0,48,1199	0/0:25,0:25:69.20:0,69,1270	0/0:10,0:10:27.09:0,27,715	0/0:21,0:21:45.07:0,45,813	0/0:10,0:10:18.04:0,18,284	0/0:20,0:20:54.16:0,54,1158	0/0:16,0:16:42.13:0,42,934	0/0:14,0:14:35.79:0,36,799	1/1:19,0:19:30.10:412,30,0	0/0:26,0:26:75.26:0,75,1790	1/1:15,0:15:24.08:348,24,0	1/1:10,1:11:15.05:223,15,0	0/0:11,0:11:20.08:0,20,345	0/0:18,0:18:51.16:0,51,1038	0/0:18,0:18:42.56:0,43,881	0/0:8,0:8:21.06:0,21,432	0/0:14,0:14:36.12:0,36,862	0/0:14,0:14:42.13:0,42,989	1/1:15,1:16:15.05:223,15,0	0/1:16,1:17:8.51:581,0,9	1/1:18,1:19:36.11:506,36,0	1/1:8,0:8:21.07:310,21,0
chr10	3286042	.	CTTCCT	C	2385.93	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=12.371;DP=445;FS=8.585;HRun=0;HaplotypeScore=99.0670;InbreedingCoeff=0.8918;MQ=78.64;MQ0=0;MQRankSum=-12.458;QD=18.79;ReadPosRankSum=8.016;VQSLOD=1.7739;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:25:14.85:464,15,0	0/0:11,0:11:33.05:0,33,854	0/0:24,0:23:50.69:0,51,1198	0/0:16,0:15:40.57:0,41,737	0/0:15,0:15:42.13:0,42,1008	0/0:20,0:20:50.98:0,51,1315	0/0:17,0:17:51.16:0,51,1381	0/0:23,0:23:69.24:0,69,1702	0/0:10,0:10:30.09:0,30,832	0/0:19,0:19:51.16:0,51,1156	0/0:10,0:10:24.05:0,24,462	0/0:19,0:19:57.18:0,57,1440	0/0:14,0:14:42.14:0,42,1113	0/0:12,0:12:36.12:0,36,936	1/1:17,1:18:29.97:381,30,0	0/0:25,0:25:75.26:0,75,2119	1/1:16,0:16:24.03:275,24,0	1/1:9,2:11:14.97:238,15,0	0/0:9,0:9:24.05:0,24,498	0/0:19,0:19:57.20:0,57,1406	0/0:19,0:19:38.38:0,38,1116	0/0:8,0:8:21.07:0,21,519	0/0:13,0:13:39.13:0,39,1089	0/0:15,0:15:45.15:0,45,1209	1/1:14,1:15:15.05:225,15,0	0/1:17,0:17:40.75:397,0,41	1/1:17,0:17:12.10:356,12,0	1/1:8,0:8:21.06:247,21,0
chr10	3286043	.	TTCCTCC	T	4120.66	PASS	AB=0.535;AC=14;AF=0.250;AN=56;BaseQRankSum=12.596;DP=438;FS=6.213;HRun=0;HaplotypeScore=100.1218;InbreedingCoeff=0.8552;MQ=79.83;MQ0=0;MQRankSum=-11.316;QD=33.50;ReadPosRankSum=7.731;VQSLOD=2.0625;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,2:24:27.94:447,28,0	0/0:11,0:11:30.10:0,30,915	0/0:25,0:24:45.11:0,45,1303	0/0:16,0:15:26.77:0,27,614	0/0:15,0:15:42.14:0,42,1178	0/0:20,0:20:51.06:0,51,1328	0/0:16,0:16:48.16:0,48,1601	0/0:23,0:23:69.20:0,69,1388	0/0:9,0:9:27.09:0,27,941	0/0:17,0:17:45.07:0,45,924	0/0:9,0:9:17.73:0,18,325	0/0:18,0:18:54.16:0,54,1479	0/0:14,0:14:42.13:0,42,1131	0/0:13,0:13:38.29:0,38,990	1/1:1,2:18:29.70:383,30,0	0/0:25,0:25:75.26:0,75,2310	1/1:0,15:15:24.08:571,24,0	1/1:3,0:11:14.61:139,15,0	0/0:10,0:10:26.80:0,27,490	0/0:19,0:19:57.18:0,57,1460	0/0:19,0:19:48.58:0,49,1207	0/0:8,0:8:21.06:0,21,535	0/0:13,0:13:39.13:0,39,1157	0/0:15,0:15:45.14:0,45,1343	0/1:2,9:14:1.73:243,0,2	0/1:2,15:17:8.59:978,0,9	1/1:1,15:16:36.11:825,36,0	1/1:0,8:8:21.07:534,21,0
chr10	3287393	.	G	GCATAAAATCCCACCATA	1930.03	PASS	AC=12;AF=0.231;AN=52;BaseQRankSum=4.029;DP=432;FS=2.283;HRun=0;HaplotypeScore=203.1936;InbreedingCoeff=0.8764;MQ=89.15;MQ0=0;MQRankSum=-4.273;QD=120.63;ReadPosRankSum=-1.199;VQSLOD=3.5110;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,1:3:9.03:333,9,0	0/0:16,0:16:48.16:0,48,2343	0/0:19,0:19:48.01:0,48,1740	0/0:19,0:19:41.09:0,41,1421	0/0:27,0:27:81.24:0,81,3715	0/0:18,0:18:48.16:0,48,2236	0/0:24,0:24:72.25:0,72,3199	0/0:32,0:32:93.31:0,93,4044	0/0:24,0:24:72.25:0,72,3410	0/0:18,0:18:54.19:0,54,2601	0/0:17,0:17:51.16:0,51,2293	0/0:25,0:25:72.25:0,72,3491	0/0:22,0:22:66.23:0,66,3176	0/0:23,0:23:69.24:0,69,3483	1/1:2,1:4:9.03:510,9,0	0/0:20,0:20:57.20:0,57,2815	1/1:1,1:2:3.01:232,3,0	./.	0/0:21,0:21:63.22:0,63,2799	0/0:20,0:20:60.21:0,60,2743	0/0:22,0:22:66.23:0,66,3175	0/0:15,0:15:45.14:0,45,2123	0/0:12,0:12:36.12:0,36,1548	0/0:20,0:20:60.19:0,60,2731	1/1:0,3:3:9.03:632,9,0	1/1:2,0:2:6.02:114,6,0	1/1:1,0:2:6.02:266,6,0	./.
chr10	3287400	.	A	ATAT	187.59	PASS	AB=0.750;AC=10;AF=0.192;AN=52;BaseQRankSum=5.087;DP=421;FS=1.401;HRun=0;HaplotypeScore=77.0397;InbreedingCoeff=0.6603;MQ=88.90;MQ0=0;MQRankSum=-3.202;QD=15.63;ReadPosRankSum=1.325;VQSLOD=3.0569;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,1:1:3.01:48,3,0	0/0:15,0:15:45.15:0,45,823	0/0:17,0:17:30.14:0,30,695	0/0:19,0:19:49.89:0,50,858	0/0:25,0:25:75.26:0,75,1398	0/0:14,0:14:42.14:0,42,780	0/0:25,0:25:72.23:0,72,1293	0/0:33,0:33:93.31:0,93,1695	0/0:24,0:24:72.25:0,72,1327	0/0:17,0:17:51.16:0,51,916	0/0:15,0:15:45.15:0,45,839	0/0:28,0:28:81.26:0,81,1471	0/0:23,0:23:66.19:0,66,1166	0/0:26,0:26:75.23:0,75,1357	1/1:1,2:3:6.02:89,6,0	0/0:22,0:22:61.36:0,61,1171	1/1:0,1:1:3.01:46,3,0	./.	0/0:20,0:20:60.17:0,60,1019	0/0:19,0:19:57.19:0,57,1037	0/0:21,0:21:63.22:0,63,1162	0/0:16,0:16:48.16:0,48,895	0/0:11,0:11:33.11:0,33,593	0/0:18,0:18:51.17:0,51,951	0/1:0,3:3:13.22:83,0,13	0/1:2,0:2:0:1,0,0	1/1:1,1:2:3.01:49,3,0	./.
chr10	3287401	.	C	CTCCATAT	6081.11	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=12.990;DP=492;FS=3.044;HRun=0;HaplotypeScore=187.6661;InbreedingCoeff=0.9465;MQ=83.63;MQ0=0;MQRankSum=-12.357;QD=69.90;ReadPosRankSum=3.384;VQSLOD=4.6863;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,1:11:20.60:573,21,0	0/0:15,0:15:45.15:0,45,1184	0/0:18,0:19:42.12:0,42,950	0/0:18,0:18:49.91:0,50,1122	0/0:25,0:25:75.26:0,75,2018	0/0:15,0:15:42.14:0,42,1115	0/0:24,0:24:72.23:0,72,1827	0/0:31,0:31:90.31:0,90,2328	0/0:25,0:25:72.25:0,72,1890	0/0:16,0:16:48.16:0,48,1264	0/0:15,0:15:45.15:0,45,1230	0/0:28,0:28:84.25:0,84,2114	0/0:22,0:22:66.20:0,66,1712	0/0:25,0:25:75.23:0,75,1932	1/1:17,2:19:54.17:1619,54,0	0/0:22,0:22:66.16:0,66,1735	1/1:9,1:10:18.06:513,18,0	1/1:4,0:4:3.01:92,3,0	0/0:19,0:19:54.18:0,54,1369	0/0:19,0:19:57.15:0,57,1443	0/0:22,0:22:63.22:0,63,1630	0/0:16,0:16:48.16:0,48,1269	0/0:11,0:11:33.11:0,33,858	0/0:18,0:18:54.17:0,54,1419	1/1:10,3:13:13.89:778,14,0	1/1:12,0:12:36.11:934,36,0	1/1:15,1:16:48.15:1387,48,0	1/1:2,0:2:6.02:185,6,0
chr10	3289603	.	CAT	C	1653.81	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.114;DP=780;FS=0.622;HRun=0;HaplotypeScore=92.5674;InbreedingCoeff=0.9995;MQ=82.56;MQ0=0;MQRankSum=-0.315;QD=44.70;ReadPosRankSum=-3.132;VQSLOD=3.5644;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,105,2130	0/0:16,0:16:48.16:0,48,975	0/0:22,0:22:53.36:0,53,1102	0/0:23,0:23:58.05:0,58,1061	0/0:39,0:39:99:0,117,2337	0/0:24,0:24:72.23:0,72,1413	0/0:26,0:26:78.27:0,78,1585	1/1:0,37:37:99:1749,111,0	0/0:37,0:37:99:0,111,2230	0/0:35,0:35:99:0,105,2134	0/0:28,0:28:81.28:0,81,1644	0/0:32,0:32:96.32:0,96,1899	0/0:28,0:28:84.29:0,84,1707	0/0:24,0:24:72.25:0,72,1461	0/0:33,0:33:96.32:0,96,1902	0/0:31,0:31:90.30:0,90,1795	0/0:26,0:26:78.27:0,78,1574	0/0:16,0:16:45.13:0,45,825	0/0:24,0:24:69.22:0,69,1330	0/0:34,0:34:99:0,102,2038	0/0:26,0:26:78.27:0,78,1585	0/0:33,0:33:99:0,99,1977	0/0:28,0:28:84.28:0,84,1673	0/0:22,0:22:66.23:0,66,1330	0/0:23,0:23:63.22:0,63,1280	0/0:26,0:26:78.25:0,78,1494	0/0:40,0:40:99:0,117,2282	0/0:10,0:10:30.10:0,30,609
chr10	3289738	.	A	AAGAAGGTAACT	28735.24	PASS	AB=0.630;AC=17;AF=0.304;AN=56;BaseQRankSum=-4.388;DP=652;FS=0.316;HRun=0;HaplotypeScore=189.9802;InbreedingCoeff=0.9133;MQ=83.15;MQ0=0;MQRankSum=-18.908;QD=127.15;ReadPosRankSum=-1.862;VQSLOD=4.8737;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,22:31:87.30:4384,87,0	0/0:13,0:13:39.12:0,39,1310	0/0:24,0:24:69.20:0,69,1981	0/0:22,0:22:60.21:0,60,2015	0/0:9,0:9:27.09:0,27,895	0/0:22,0:22:66.21:0,66,2172	0/0:24,0:24:69.22:0,69,2257	1/1:29,0:38:99:3654,99,0	0/0:27,0:27:78.25:0,78,2702	0/0:22,0:22:60.19:0,60,1901	0/0:18,0:18:54.19:0,54,1836	0/0:35,0:35:99:0,99,3440	0/0:28,0:28:84.27:0,84,2852	0/0:23,0:23:63.22:0,63,2097	1/1:11,27:41:99:6259,117,0	0/0:33,0:33:96.33:0,96,3362	1/1:9,9:20:51.17:2628,51,0	1/1:3,3:7:18.06:842,18,0	0/0:21,0:21:57.20:0,57,1833	0/0:25,0:25:66.21:0,66,2138	0/0:21,0:21:57.18:0,57,1845	0/0:22,0:22:60.21:0,60,2105	0/0:16,0:16:48.15:0,48,1510	0/0:21,0:21:60.21:0,60,2072	1/1:8,12:22:51.09:2478,51,0	0/1:7,7:17:58.95:1768,0,59	1/1:13,23:37:99:5514,108,0	1/1:1,6:13:21.07:1209,21,0
chr10	3291066	.	GTT	G	2121.96	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=2.638;DP=703;FS=7.691;HRun=14;HaplotypeScore=95.9098;InbreedingCoeff=0.8498;MQ=71.30;MQ0=10;MQRankSum=-5.689;QD=13.87;ReadPosRankSum=3.045;VQSLOD=2.6500;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:9,0:15:4.67:5,0,166	0/0:10,0:11:23.57:0,24,303	0/0:55,1:19:23.42:0,23,211	0/0:39,0:20:35.85:0,36,337	0/0:30,0:32:85.67:0,86,1025	0/0:16,0:23:55.12:0,55,620	0/0:13,0:15:38.10:0,38,469	0/0:33,0:38:99:0,99,968	0/0:16,0:19:54.39:0,54,600	0/0:29,0:32:48.66:0,49,822	0/0:17,0:20:55.13:0,55,651	0/0:14,0:15:38.60:0,39,496	0/0:14,0:14:39.09:0,39,500	0/0:15,0:14:39.10:0,39,511	0/0:7,0:19:33.18:0,33,162	0/0:21,0:21:50.63:0,51,648	0/0:15,0:20:50.08:0,50,581	0/0:10,0:21:42.20:0,42,284	0/0:9,0:13:33.08:0,33,403	0/0:23,0:26:62.15:0,62,766	0/0:8,0:8:21.07:0,21,291	0/0:23,0:29:67.50:0,68,722	0/0:24,0:27:73.68:0,74,919	0/0:10,0:10:30.07:0,30,376	0/0:5,1:23:14.65:0,15,155	1/1:15,34:56:99:995,99,0	1/1:17,40:62:99:1015,104,0	1/1:7,12:18:10.12:248,10,0
chr10	3292357	.	GTGTT	G	4813.94	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=13.817;DP=709;FS=0.000;HRun=0;HaplotypeScore=113.2508;InbreedingCoeff=0.9986;MQ=68.49;MQ0=5;MQRankSum=-1.476;QD=26.31;ReadPosRankSum=0.916;VQSLOD=4.5333;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,102,2345	0/0:11,0:11:24.08:0,24,565	0/0:38,1:32:27.09:0,27,600	0/0:31,0:23:36.12:0,36,807	0/0:27,0:27:60.21:0,60,1460	0/0:31,0:31:69.19:0,69,1561	0/0:22,0:22:42.12:0,42,934	1/1:15,0:32:42.12:310,42,0	0/0:14,0:14:39.13:0,39,935	0/0:35,0:35:78.27:0,78,1856	0/0:17,0:17:39.12:0,39,870	0/0:15,0:15:45.15:0,45,1056	0/0:23,0:23:54.19:0,54,1282	0/0:32,0:32:69.24:0,69,1642	1/1:9,16:25:33.11:539,33,0	0/0:31,0:31:75.24:0,75,1758	1/1:4,24:28:57.19:931,57,0	1/1:4,16:20:39.13:637,39,0	0/0:30,0:30:60.19:0,60,1311	0/0:22,0:22:51.18:0,51,1231	0/0:19,0:19:33.11:0,33,803	0/0:28,0:28:51.17:0,51,1180	0/0:18,0:18:42.13:0,42,911	0/0:37,0:37:87.30:0,87,2117	1/1:7,16:23:39.13:637,39,0	1/1:3,14:18:45.15:733,45,0	1/1:9,15:24:42.14:686,42,0	1/1:3,10:10:21.07:343,21,0
chr10	3293316	.	CT	C	1358.77	PASS	AB=0.847;AC=6;AF=0.107;AN=56;BaseQRankSum=9.648;DP=1740;DS;FS=0.000;HRun=1;HaplotypeScore=152.0219;InbreedingCoeff=0.3806;MQ=43.56;MQ0=537;MQRankSum=-7.464;QD=5.71;ReadPosRankSum=-2.284;VQSLOD=-0.5598;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:102,0:54:92.27:0,92,1212	0/0:10,0:7:21.07:0,21,335	0/0:101,1:38:71.19:0,71,1105	0/0:150,0:37:68.58:0,69,808	0/0:37,0:27:75.24:0,75,1168	0/0:42,0:31:84.27:0,84,1304	0/0:84,0:56:99:0,124,1901	0/1:80,5:11:0.61:160,0,1	0/0:56,0:37:96.24:0,96,1413	0/0:119,0:50:99:0,129,1897	0/0:15,0:13:28.36:0,28,453	0/0:29,0:23:65.25:0,65,1001	0/0:32,0:20:48.12:0,48,721	0/0:35,0:28:28.46:0,28,1093	0/1:19,12:18:99:379,0,132	0/0:31,0:28:84.27:0,84,1298	0/1:38,8:22:99:272,0,128	0/1:48,9:28:99:252,0,161	0/0:193,0:35:65.90:0,66,943	0/0:19,0:14:39.10:0,39,591	0/0:202,0:82:99:0,163,2418	0/0:35,0:25:69.23:0,69,1093	0/0:21,0:15:42.14:0,42,651	0/0:54,2:44:99:0,120,1885	1/1:3,15:17:33.11:427,33,0	0/0:80,0:32:70.68:0,71,866	0/0:38,0:26:64.62:0,65,720	0/0:12,0:11:29.83:0,30,296
chr10	3293317	.	TC	T	1383.27	PASS	AB=0.996;AC=6;AF=0.107;AN=56;BaseQRankSum=9.684;DP=1743;DS;FS=1.032;HRun=3;HaplotypeScore=150.5209;InbreedingCoeff=0.3600;MQ=43.59;MQ0=540;MQRankSum=-6.869;QD=5.81;ReadPosRankSum=-2.465;VQSLOD=-0.4436;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:100,0:54:91.02:0,91,739	0/0:10,0:7:21.07:0,21,335	0/0:102,1:39:57.60:0,58,932	0/0:147,0:37:54.75:0,55,831	0/0:36,0:26:78.25:0,78,1198	0/0:41,0:31:84.24:0,84,1269	0/0:85,0:56:99:0,131,1914	0/1:87,0:13:0.13:160,0,0	0/0:55,0:36:92.93:0,93,1324	0/0:119,0:50:99:0,132,1764	0/0:14,0:12:9.18:0,9,395	0/0:29,0:23:65.23:0,65,988	0/0:31,0:19:47.99:0,48,724	0/0:32,2:27:5.87:0,6,1009	0/1:32,0:19:77.27:379,0,77	0/0:31,0:28:84.25:0,84,1292	0/1:45,0:22:93.51:269,0,94	0/1:52,1:25:88.48:279,0,88	0/0:196,0:34:62.83:0,63,838	0/0:20,0:15:42.13:0,42,642	0/0:200,3:83:99:0,164,2346	0/0:35,0:25:69.24:0,69,1102	0/0:21,0:15:42.13:0,42,645	0/0:56,0:45:99:0,123,1908	1/1:18,0:17:33.11:427,33,0	0/0:80,0:32:69.52:0,70,474	0/0:36,1:26:63.36:0,63,449	0/0:12,0:11:29.50:0,29,187
chr10	3293318	.	C	CTA	194.13	PASS	AB=0.975;AC=8;AF=0.143;AN=56;BaseQRankSum=7.877;DP=1766;DS;FS=16.367;HRun=0;HaplotypeScore=172.3361;InbreedingCoeff=0.3878;MQ=43.05;MQ0=549;MQRankSum=-6.893;QD=0.69;ReadPosRankSum=-4.723;VQSLOD=-0.2755;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:101,1:55:58.17:0,58,723	0/0:10,0:7:21.07:0,21,342	0/0:106,0:38:43.85:0,44,962	0/0:150,0:35:23.96:0,24,767	0/0:36,0:26:78.22:0,78,1194	0/0:43,0:33:84.10:0,84,1295	0/0:86,0:57:99:0,133,1959	1/1:87,1:12:15.81:100,16,0	0/0:54,1:36:32.31:0,32,1272	0/0:119,0:50:99:0,116,1714	0/0:14,0:12:27.09:0,27,423	0/0:29,1:24:66.15:0,66,1019	0/0:34,0:22:7.49:0,7,701	0/0:33,1:27:80.98:0,81,1144	0/1:33,1:20:51.90:52,0,71	0/0:30,0:27:81.24:0,81,1288	0/1:47,0:24:22.13:22,0,54	0/1:55,0:25:11.11:11,0,147	0/0:201,0:33:14.10:0,14,725	0/0:20,0:15:42.13:0,42,641	0/0:205,0:85:99:0,160,2395	0/0:35,0:25:69.24:0,69,1120	0/0:21,0:15:42.12:0,42,657	0/0:56,0:46:99:0,121,1917	1/1:18,0:17:12.03:34,12,0	0/0:80,0:32:48.08:0,48,377	0/1:35,3:26:99:117,0,314	0/0:12,0:11:19.99:0,20,112
chr10	3294869	.	A	AC	392.49	PASS	AB=0.966;AC=3;AF=0.054;AN=56;BaseQRankSum=-3.758;DP=597;FS=1.948;HRun=8;HaplotypeScore=80.7284;InbreedingCoeff=0.6649;MQ=87.13;MQ0=1;MQRankSum=0.045;QD=7.55;ReadPosRankSum=-0.776;VQSLOD=1.2002;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,20:24:42.12:485,42,0	0/0:11,0:11:27.01:0,27,247	0/1:27,0:27:10.58:11,0,298	0/0:24,0:22:26.42:0,26,289	0/0:25,0:25:66.03:0,66,603	0/0:29,0:29:78.02:0,78,707	0/0:15,0:15:45.02:0,45,411	0/0:41,0:41:95.98:0,96,874	0/0:23,0:23:60.02:0,60,549	0/0:21,0:21:57.01:0,57,516	0/0:21,0:21:57:0,57,511	0/0:11,0:11:30:0,30,269	0/0:24,0:24:54.01:0,54,494	0/0:12,0:12:27.01:0,27,247	0/0:35,0:35:96:0,96,874	0/0:15,0:15:41.98:0,42,371	0/0:15,0:14:32.95:0,33,297	0/0:9,0:9:27.01:0,27,247	0/0:12,0:12:30.01:0,30,272	0/0:29,0:29:77.48:0,77,683	0/0:17,0:18:44.06:0,44,390	0/0:19,0:19:42.95:0,43,386	0/0:24,0:24:66.03:0,66,603	0/0:19,0:19:45.02:0,45,411	0/0:16,0:16:42:0,42,379	0/0:24,0:24:60:0,60,548	0/0:29,0:29:81.02:0,81,736	0/0:23,0:23:66.02:0,66,604
chr10	3295015	.	GAGAGAA	G	1266.89	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=10.243;DP=566;FS=14.045;HRun=0;HaplotypeScore=149.8130;InbreedingCoeff=0.2929;MQ=72.49;MQ0=5;MQRankSum=0.426;QD=7.92;ReadPosRankSum=0.771;VQSLOD=2.1394;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:94.96:0,95,1459	0/0:4,0:4:11.95:0,12,173	0/0:19,0:14:14.38:0,14,171	0/0:30,0:18:23.96:0,24,220	0/0:24,0:24:66.11:0,66,1062	0/0:21,0:20:50.04:0,50,731	0/0:21,0:21:62.79:0,63,875	1/1:36,0:36:41.89:564,42,0	0/0:20,0:20:51.05:0,51,975	0/0:19,0:19:51.10:0,51,668	0/0:16,0:16:47.67:0,48,498	0/0:18,0:18:51.10:0,51,945	0/0:24,0:24:61.31:0,61,794	0/0:17,0:17:42.04:0,42,785	0/1:38,0:38:99:312,0,575	0/0:18,0:18:47.12:0,47,829	1/1:1,16:17:5.91:72,6,0	0/1:19,0:19:82.58:83,0,334	0/0:11,0:11:31.55:0,32,513	0/0:16,0:16:41.98:0,42,567	0/0:17,0:17:45.07:0,45,707	0/0:17,0:17:48:0,48,729	0/0:13,0:13:33.04:0,33,493	0/0:21,0:21:57.09:0,57,1036	0/1:14,0:14:36.20:36,0,279	0/1:27,0:27:99:279,0,376	0/0:23,0:23:23:0,23,340	0/1:9,0:8:19.72:68,0,20
chr10	3295025	.	G	GAA	1130.55	PASS	AB=0.991;AC=6;AF=0.107;AN=56;BaseQRankSum=9.993;DP=612;FS=3.204;HRun=1;HaplotypeScore=120.6296;InbreedingCoeff=0.4313;MQ=63.52;MQ0=12;MQRankSum=-6.946;QD=9.27;ReadPosRankSum=-1.888;VQSLOD=-0.1841;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:98.37:0,98,863	0/0:3,0:3:8.62:0,9,54	0/0:15,0:10:13.32:0,13,166	0/1:26,0:14:4.05:4,0,162	0/0:29,0:29:51.73:0,52,546	0/0:23,0:21:46.60:0,47,406	0/0:28,0:27:62.60:0,63,576	0/1:35,0:35:1.48:345,0,1	0/0:24,0:24:55.38:0,55,514	0/0:19,0:19:48.04:0,48,451	0/0:19,0:19:39.95:0,40,330	0/0:20,0:20:46.52:0,47,454	0/0:23,0:23:59.74:0,60,537	0/0:19,0:19:39.31:0,39,340	0/0:38,0:38:89.26:0,89,860	0/0:21,0:20:38.87:0,39,406	0/0:22,0:21:11.54:0,12,78	0/0:21,0:20:46.28:0,46,424	0/0:12,0:12:32.77:0,33,291	0/0:16,0:16:34.79:0,35,317	0/0:21,0:21:53.94:0,54,468	0/0:21,0:21:47.82:0,48,459	0/0:15,0:14:20.86:0,21,161	0/0:22,0:22:50.98:0,51,482	0/0:15,0:15:36.13:0,36,299	0/1:26,1:27:22.91:498,0,23	1/1:3,24:26:24.87:358,25,0	0/1:7,0:6:5.30:51,0,5
chr10	3295304	.	TG	T	696.74	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=10.056;DP=636;FS=16.494;HRun=2;HaplotypeScore=100.5728;InbreedingCoeff=0.9679;MQ=72.01;MQ0=0;MQRankSum=-6.194;QD=11.61;ReadPosRankSum=-4.711;VQSLOD=-0.0835;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:54.15:0,54,763	0/0:11,0:11:33.09:0,33,465	0/0:21,0:19:50.10:0,50,669	0/0:20,0:19:56.46:0,56,647	0/0:39,0:39:99:0,117,1652	0/0:32,0:32:87.22:0,87,1170	0/0:22,0:22:66.17:0,66,905	0/0:26,0:26:77.42:0,77,673	0/0:23,0:23:39.26:0,39,820	0/0:29,0:29:81.23:0,81,1107	0/0:26,0:26:78.15:0,78,1063	0/0:16,0:16:48.15:0,48,694	0/0:25,0:25:72.12:0,72,966	0/0:19,0:19:31.26:0,31,715	0/0:25,0:25:54.40:0,54,557	0/0:29,0:29:87.21:0,87,1195	0/0:19,0:20:6.98:0,7,337	0/0:9,0:9:23.99:0,24,220	0/0:16,0:16:45.10:0,45,609	0/0:31,0:31:89.21:0,89,1195	0/0:15,0:15:45.15:0,45,670	0/0:22,0:22:66.09:0,66,907	0/0:28,0:28:77.96:0,78,1073	0/0:28,0:28:78.20:0,78,1080	0/0:25,0:26:27.41:0,27,537	1/1:24,2:26:28.86:347,29,0	1/1:19,3:22:52.91:297,53,0	1/1:11,1:12:30.36:196,30,0
chr10	3295305	.	G	GTTT	2639.05	PASS	AB=1.000;AC=10;AF=0.179;AN=56;BaseQRankSum=14.220;DP=631;FS=11.196;HRun=3;HaplotypeScore=120.9894;InbreedingCoeff=0.5005;MQ=73.46;MQ0=0;MQRankSum=-12.816;QD=18.99;ReadPosRankSum=-0.529;VQSLOD=-0.3868;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:54.17:0,54,967	0/0:11,0:11:33.11:0,33,596	0/0:21,0:20:53.84:0,54,863	0/0:21,0:20:56.66:0,57,875	0/0:40,0:40:99:0,117,2054	0/0:30,0:30:87.27:0,87,1512	0/0:22,0:22:66.20:0,66,1135	0/0:26,0:26:56.75:0,57,519	0/0:22,0:22:61.99:0,62,1061	0/0:28,0:28:80.96:0,81,1426	0/0:26,0:26:78.19:0,78,1335	0/0:16,0:16:48.15:0,48,839	0/0:24,0:24:72.23:0,72,1226	0/0:18,0:18:52.96:0,53,909	0/1:25,0:25:99:256,0,118	0/0:29,0:29:87.28:0,87,1534	0/1:20,0:20:81.38:199,0,81	0/1:9,0:9:62.57:63,0,74	0/0:15,0:15:45.12:0,45,745	0/0:31,0:31:93.29:0,93,1588	0/0:15,0:15:45.15:0,45,838	0/0:23,0:23:66.21:0,66,1158	0/0:27,0:27:78:0,78,1369	0/0:28,0:28:78.26:0,78,1353	0/1:25,0:25:95.26:275,0,95	1/1:16,10:26:12.94:830,13,0	1/1:11,11:22:43.46:882,43,0	1/1:8,4:12:15.19:295,15,0
chr10	3295306	.	G	GTTT	6187.93	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=14.001;DP=633;FS=20.971;HRun=9;HaplotypeScore=111.7368;InbreedingCoeff=0.9975;MQ=73.29;MQ0=0;MQRankSum=-13.108;QD=36.83;ReadPosRankSum=-4.212;VQSLOD=1.7791;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:48.15:0,48,606	0/0:11,0:11:27.06:0,27,340	0/0:21,0:20:39.03:0,39,476	0/0:21,0:20:34.18:0,34,388	0/0:40,0:40:99:0,105,1326	0/0:30,0:30:72.20:0,72,909	0/0:22,0:22:54.11:0,54,641	1/1:10,1:27:55.08:457,55,0	0/0:22,0:22:57.15:0,57,705	0/0:28,0:28:71.90:0,72,909	0/0:25,0:25:66.20:0,66,829	0/0:16,0:16:45.14:0,45,569	0/0:23,0:24:58.74:0,59,755	0/0:18,0:18:51.12:0,51,644	1/1:8,15:24:62.22:1096,62,0	0/0:29,0:29:72.20:0,72,909	1/1:8,13:21:51.11:867,51,0	1/1:4,5:10:21.05:378,21,0	0/0:15,0:15:36.08:0,36,444	0/0:30,0:31:75.14:0,75,926	0/0:15,0:15:45.13:0,45,555	0/0:23,0:23:63.17:0,63,782	0/0:27,0:27:72.17:0,72,889	0/0:28,0:28:69.18:0,69,842	1/1:7,16:25:66.19:1149,66,0	1/1:27,0:27:25.42:925,25,0	1/1:22,0:22:57.19:994,57,0	1/1:12,0:12:18.06:323,18,0
chr10	3295323	.	C	CT	5694.81	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=13.788;DP=582;FS=0.000;HRun=4;HaplotypeScore=80.2471;InbreedingCoeff=0.9977;MQ=71.75;MQ0=0;MQRankSum=-10.336;QD=34.31;ReadPosRankSum=-3.249;VQSLOD=3.8475;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:48.14:0,48,545	0/0:6,0:6:18.05:0,18,204	0/0:19,0:18:48.13:0,48,542	0/0:14,0:15:31.25:0,31,312	0/0:40,0:40:99:0,117,1317	0/0:29,0:29:84.22:0,84,943	0/0:15,0:15:42.12:0,42,476	1/1:6,21:27:63.20:845,63,0	0/0:18,0:18:51.14:0,51,578	0/0:28,0:28:81.12:0,81,912	0/0:22,0:22:63.18:0,63,714	0/0:15,0:15:36.10:0,36,408	0/0:24,0:24:69.20:0,69,783	0/0:22,0:22:60.15:0,60,669	1/1:4,19:23:60.19:805,60,0	0/0:31,0:31:87.25:0,87,987	1/1:3,20:23:54.18:738,54,0	1/1:2,7:9:21.07:287,21,0	0/0:12,0:12:30.09:0,30,340	0/0:21,0:21:57.16:0,57,646	0/0:15,0:15:45.11:0,45,500	0/0:22,0:22:63.16:0,63,704	0/0:23,0:23:60.17:0,60,680	0/0:23,0:23:63.18:0,63,714	1/1:0,24:24:66.18:880,66,0	1/1:3,23:26:38.20:909,38,0	1/1:3,20:23:60.20:820,60,0	1/1:0,11:11:30.10:410,30,0
chr10	3295699	.	TACACACACACACACACACACACAC	T	1337.21	PASS	AB=0.853;AC=4;AF=0.071;AN=56;BaseQRankSum=5.087;DP=534;FS=9.331;HRun=0;HaplotypeScore=291.1625;InbreedingCoeff=0.2918;MQ=69.72;MQ0=8;MQRankSum=-3.509;QD=19.38;ReadPosRankSum=-0.341;VQSLOD=0.9750;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:28:18.04:0,18,818	0/0:10,0:10:6.02:0,6,624	0/0:23,0:17:3.01:0,3,55	0/0:32,0:26:17.10:0,17,453	0/0:15,0:15:9.03:0,9,896	0/0:18,0:20:24.08:0,24,2294	0/0:16,0:15:30.09:0,30,2460	0/0:16,0:16:21.07:0,21,697	0/0:19,0:19:30.10:0,30,2535	0/0:28,0:27:50.20:0,50,3566	0/0:13,0:13:3.01:0,3,72	0/0:19,0:19:33.11:0,33,2587	0/0:22,0:22:33.10:0,33,2271	0/0:19,0:22:33.11:0,33,2626	1/1:16,7:23:15.05:936,15,0	0/0:22,0:24:32.26:0,32,3191	0/1:18,0:23:93.40:326,0,93	0/0:7,0:6:5.98:0,6,117	0/0:15,0:14:21.91:0,22,983	0/0:15,0:15:21.07:0,21,1589	0/0:23,0:23:24.08:0,24,1856	0/0:11,0:11:16.66:0,17,1886	0/0:14,0:17:18.06:0,18,1265	0/0:22,0:22:18.06:0,18,1272	0/1:20,3:23:38.82:186,0,39	0/0:11,0:11:21.07:0,21,1159	0/0:13,0:13:9.03:0,9,559	0/0:20,0:22:36.12:0,36,2038
chr10	3296894	.	GA	G	1246.56	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.938;DP=642;FS=9.800;HRun=1;HaplotypeScore=83.1231;InbreedingCoeff=0.9905;MQ=84.70;MQ0=1;MQRankSum=-3.917;QD=35.62;ReadPosRankSum=0.861;VQSLOD=3.2242;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,35:35:96.32:1341,96,0	0/0:6,0:6:18.06:0,18,277	0/0:19,0:19:56.98:0,57,873	0/0:23,0:23:69.22:0,69,1015	0/0:18,0:18:48.16:0,48,760	0/0:24,0:24:72.25:0,72,1148	0/0:27,0:26:81.26:0,81,1272	0/0:51,0:51:99:0,153,2343	0/0:30,0:30:90.29:0,90,1412	0/0:24,0:24:69.24:0,69,1102	0/0:11,0:11:30.10:0,30,479	0/0:29,0:29:87.30:0,87,1390	0/0:24,0:24:72.25:0,72,1146	0/0:23,0:23:69.24:0,69,1103	0/0:27,0:27:81.24:0,81,1222	0/0:30,0:30:90.29:0,90,1416	0/0:18,0:18:54.14:0,54,835	0/0:19,0:19:53.64:0,54,806	0/0:27,0:27:81.27:0,81,1269	0/0:13,0:13:39.13:0,39,623	0/0:36,0:35:99:0,105,1651	0/0:14,0:14:33.11:0,33,528	0/0:10,0:10:30.10:0,30,478	0/0:29,0:29:87.28:0,87,1365	0/0:18,0:18:48.14:0,48,723	0/0:20,0:20:60.20:0,60,959	0/0:26,0:26:75.23:0,75,1172	0/0:11,0:11:33.11:0,33,527
chr10	3297157	.	A	AC	861.32	PASS	AB=0.824;AC=9;AF=0.161;AN=56;BaseQRankSum=6.020;DP=401;FS=0.000;HRun=5;HaplotypeScore=59.5507;InbreedingCoeff=-0.2166;MQ=66.54;MQ0=9;MQRankSum=0.403;QD=4.53;ReadPosRankSum=0.885;VQSLOD=-0.7500;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:21:37.99:0,38,392	0/0:3,0:3:2.80:0,3,32	0/0:16,0:11:18.03:0,18,184	0/1:26,0:19:18.28:18,0,178	0/0:8,0:8:21.05:0,21,224	0/0:7,0:7:18.05:0,18,193	0/0:15,0:15:27.05:0,27,280	0/1:14,6:18:99:183,0,186	0/0:15,0:14:33.08:0,33,353	0/0:9,0:9:21.94:0,22,227	0/0:6,0:6:18.03:0,18,185	0/0:14,0:14:27.06:0,27,290	0/0:9,0:8:18.93:0,19,195	0/0:16,0:16:3.19:0,3,343	0/1:13,9:17:99:161,0,189	0/0:8,0:8:21.05:0,21,225	0/1:26,5:22:99:201,0,125	0/1:10,6:13:97.17:97,0,105	0/0:11,0:11:27:0,27,276	0/0:4,0:4:9.02:0,9,97	0/0:17,0:17:24.03:0,24,248	0/0:5,0:5:12.03:0,12,129	0/0:5,0:5:12.03:0,12,128	0/0:21,0:21:54.12:0,54,570	0/1:20,4:21:43:43,0,268	0/1:18,4:19:99:111,0,308	0/1:15,3:15:85.33:85,0,219	0/1:8,3:9:76.57:100,0,77
chr10	3297319	.	C	CT	78.42	PASS	AB=0.625;AC=5;AF=0.096;AN=52;BaseQRankSum=3.250;DP=200;FS=24.488;HRun=0;HaplotypeScore=35.8649;InbreedingCoeff=0.5008;MQ=61.69;MQ0=0;MQRankSum=-2.705;QD=6.54;ReadPosRankSum=-0.813;VQSLOD=0.9852;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:39.10:0,39,524	0/0:3,0:3:9:0,9,105	0/0:4,0:4:9.03:0,9,109	0/0:3,0:2:5.99:0,6,54	0/0:12,0:12:33.07:0,33,425	0/0:5,0:5:15.04:0,15,193	0/0:13,0:13:39.11:0,39,510	1/1:0,3:2:6.02:96,6,0	0/0:9,0:9:24.08:0,24,335	0/0:5,0:5:15.05:0,15,202	0/0:11,0:11:24.08:0,24,335	0/0:9,0:9:23.97:0,24,296	0/0:6,0:6:18.05:0,18,235	0/0:9,0:9:27.07:0,27,339	0/0:3,2:4:5.90:0,6,37	0/0:4,0:4:12.02:0,12,137	0/1:2,3:5:6.87:75,0,7	1/1:4,0:3:2.50:9,2,0	0/0:4,0:4:12.04:0,12,168	0/0:8,0:8:21.07:0,21,294	0/0:28,0:28:84.25:0,84,1138	0/0:10,0:10:30.10:0,30,418	0/0:5,0:5:15.01:0,15,188	0/0:15,0:15:36.10:0,36,470	0/0:3,0:3:5.87:0,6,36	0/0:4,0:4:11.84:0,12,99	./.	./.
chr10	3297323	.	GCAATCCT	G	500.75	PASS	AB=0.786;AC=8;AF=0.167;AN=48;BaseQRankSum=5.040;DP=196;FS=24.467;HRun=0;HaplotypeScore=54.6253;InbreedingCoeff=0.5296;MQ=61.90;MQ0=0;MQRankSum=-3.638;QD=29.46;ReadPosRankSum=2.139;VQSLOD=1.4006;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:39.13:0,39,1499	0/0:3,0:3:9.03:0,9,363	0/0:3,0:3:9.03:0,9,222	0/1:2,0:2:6.18:6,0,115	0/0:11,0:11:30.10:0,30,1164	0/0:5,0:5:15.05:0,15,583	0/0:11,0:11:30.10:0,30,1070	./.	0/0:9,0:9:27.09:0,27,974	0/0:4,0:4:12.04:0,12,485	0/0:12,0:12:30.10:0,30,1164	0/0:8,0:8:24.06:0,24,868	0/0:6,0:6:18.06:0,18,726	0/0:8,0:8:24.08:0,24,868	1/1:1,2:2:6.02:158,6,0	0/0:4,0:4:12.04:0,12,484	1/1:3,2:5:2.95:78,3,0	./.	0/0:9,0:9:27.09:0,27,899	0/0:8,0:8:24.08:0,24,969	0/0:27,0:27:72.25:0,72,2851	0/0:10,0:10:27.08:0,27,994	0/0:5,0:5:15.05:0,15,605	0/0:16,0:16:39.13:0,39,1464	1/1:0,3:3:6.02:158,6,0	0/1:1,2:4:99:224,0,109	./.	./.
chr10	3297405	.	AC	A	3674.44	PASS	AB=0.538;AC=15;AF=0.268;AN=56;BaseQRankSum=10.900;DP=344;FS=14.320;HRun=5;HaplotypeScore=55.6392;InbreedingCoeff=0.8922;MQ=77.72;MQ0=0;MQRankSum=-1.893;QD=29.40;ReadPosRankSum=4.098;VQSLOD=2.7203;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:75.20:0,75,973	0/0:2,0:2:3.01:0,3,41	0/0:8,0:8:17.27:0,17,207	0/0:11,0:11:20.86:0,21,259	0/0:9,0:9:24.07:0,24,312	0/0:10,0:10:29.93:0,30,382	0/0:18,0:18:50.91:0,51,579	1/1:2,14:16:36.10:408,36,0	0/0:6,0:6:18.05:0,18,231	0/0:13,0:13:33.11:0,33,451	0/0:8,0:8:21.05:0,21,270	0/0:11,0:11:30.09:0,30,396	0/0:9,0:9:27.09:0,27,368	0/0:12,0:12:33.07:0,33,404	1/1:1,17:18:51.15:586,51,0	0/0:7,0:7:15.04:0,15,191	1/1:0,32:32:96.28:1099,96,0	1/1:0,17:17:48.14:544,48,0	0/0:11,0:11:27.08:0,27,353	0/0:9,0:9:24.07:0,24,312	0/0:20,0:20:54.18:0,54,738	0/0:4,0:4:12.04:0,12,164	0/0:10,0:10:24.06:0,24,309	0/0:16,0:16:36.12:0,36,491	1/1:4,13:17:30.08:340,30,0	0/1:2,12:14:1.93:369,0,2	1/1:0,7:7:21.02:225,21,0	1/1:1,3:3:9.03:102,9,0
chr10	3297490	.	ATCAC	A	6417.43	PASS	AB=0.531;AC=13;AF=0.241;AN=54;BaseQRankSum=14.633;DP=576;FS=3.008;HRun=0;HaplotypeScore=103.3450;InbreedingCoeff=0.9150;MQ=83.57;MQ0=0;MQRankSum=-3.094;QD=44.88;ReadPosRankSum=0.429;VQSLOD=5.4875;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,120,3058	0/0:9,0:9:24.08:0,24,628	0/0:21,0:21:57.20:0,57,1400	0/0:16,0:16:42.12:0,42,999	0/0:7,0:7:21.07:0,21,552	0/0:16,0:16:45.15:0,45,1178	0/0:22,0:22:57.20:0,57,1505	1/1:3,15:18:42.10:681,42,0	0/0:28,0:28:78.25:0,78,2004	0/0:21,0:21:63.22:0,63,1657	0/0:15,0:15:36.12:0,36,951	0/0:26,0:26:75.26:0,75,1974	0/0:25,0:25:75.26:0,75,1969	0/0:21,0:21:54.19:0,54,1419	1/1:8,29:37:99:1800,99,0	0/0:15,0:15:42.14:0,42,1109	1/1:11,11:22:42.08:710,42,0	1/1:2,12:14:39.11:685,39,0	0/0:18,0:18:48.16:0,48,1207	0/0:17,0:17:48.16:0,48,1267	0/0:44,0:44:99:0,129,3405	0/0:19,0:19:51.17:0,51,1347	0/0:23,0:23:69.22:0,69,1760	0/0:27,0:27:78.27:0,78,2023	1/1:1,12:13:39.13:689,39,0	0/1:3,23:26:7.01:1197,0,7	1/1:1,12:13:36.12:656,36,0	./.
chr10	3298071	.	A	AT	4541.13	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-11.257;DP=723;FS=5.443;HRun=1;HaplotypeScore=69.5353;InbreedingCoeff=0.9999;MQ=87.75;MQ0=0;MQRankSum=-1.855;QD=40.91;ReadPosRankSum=-0.801;VQSLOD=5.0695;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,99,1284	0/0:12,0:12:36.09:0,36,450	0/0:32,0:32:87.25:0,87,1080	0/0:19,0:19:40.07:0,40,605	0/0:36,0:35:99:0,99,1256	0/0:27,0:27:81.26:0,81,1052	0/0:26,0:26:75.24:0,75,974	1/1:3,28:31:84.28:1238,84,0	0/0:29,0:29:87.27:0,87,1114	0/0:25,0:25:72.23:0,72,934	0/0:27,0:27:75.24:0,75,973	0/0:27,0:27:78.25:0,78,1012	0/0:22,0:22:66.20:0,66,841	0/0:23,0:23:60.19:0,60,771	0/0:21,0:21:60.19:0,60,778	0/0:28,0:28:81.25:0,81,1037	0/0:31,0:31:75.24:0,75,973	0/0:17,0:16:48.16:0,48,622	0/0:17,0:17:51.17:0,51,662	0/0:20,0:20:60.17:0,60,763	0/0:37,0:37:99:0,105,1361	0/0:30,0:30:84.27:0,84,1091	0/0:22,0:22:59.69:0,60,778	0/0:21,0:21:57.19:0,57,740	0/0:25,0:25:75.24:0,75,973	1/1:1,27:28:81.27:1214,81,0	1/1:0,34:34:93.28:1370,93,0	1/1:1,17:18:48.16:719,48,0
chr10	3298149	.	T	TTGTGAG	1770.30	PASS	AB=0.576;AC=15;AF=0.268;AN=56;BaseQRankSum=0.555;DP=665;FS=2.874;HRun=0;HaplotypeScore=160.8332;InbreedingCoeff=0.9045;MQ=64.59;MQ0=10;MQRankSum=-2.347;QD=11.35;ReadPosRankSum=-0.333;VQSLOD=2.6762;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:38.77:0,39,405	0/0:9,0:9:20.98:0,21,213	0/0:29,0:17:32.17:0,32,347	0/0:41,0:25:39.60:0,40,488	0/0:31,0:31:60.66:0,61,524	0/0:28,0:28:51.20:0,51,512	0/0:40,0:40:76.09:0,76,862	1/1:24,0:24:27.46:388,27,0	0/0:34,0:34:63.49:0,63,688	0/0:16,0:16:35.22:0,35,340	0/0:18,0:18:36.41:0,36,470	0/0:28,0:28:59.96:0,60,628	0/0:14,0:14:26.90:0,27,259	0/0:18,0:18:32.58:0,33,248	1/1:18,0:18:22.85:264,23,0	0/0:22,0:22:50.97:0,51,645	0/1:9,22:34:10.95:170,0,11	1/1:12,0:11:26.88:209,27,0	0/0:11,0:11:24.95:0,25,193	0/0:24,0:24:47.90:0,48,473	0/0:33,0:32:59.91:0,60,526	0/0:31,0:30:69.41:0,69,676	0/0:21,0:21:50.99:0,51,543	0/0:29,0:29:60.88:0,61,815	1/1:21,0:19:20.34:189,20,0	1/1:22,0:22:15.19:348,15,0	1/1:18,0:18:16.98:249,17,0	1/1:7,0:7:13.75:152,14,0
chr10	3298154	.	AGTGT	A	97.84	PASS	AC=2;AF=0.038;AN=52;BaseQRankSum=1.822;DP=665;FS=1.900;HRun=0;HaplotypeScore=129.3772;InbreedingCoeff=0.4553;MQ=61.71;MQ0=13;MQRankSum=0.432;QD=2.96;ReadPosRankSum=0.681;VQSLOD=2.4840;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:18,14:33:4.09:176,4,0	0/0:9,0:9:6.02:0,6,132	./.	./.	0/0:31,0:31:29.02:0,29,386	0/0:27,0:26:32.55:0,33,532	0/0:41,0:41:44.15:0,44,835	0/0:24,0:24:15.33:0,15,150	0/0:30,0:31:43.12:0,43,813	0/0:16,0:15:15.04:0,15,267	0/0:18,0:18:39.10:0,39,643	0/0:29,0:29:42.11:0,42,731	0/0:12,0:12:12.03:0,12,200	0/0:20,0:20:15.05:0,15,294	0/0:19,0:19:9:0,9,106	0/0:21,0:21:23.64:0,24,510	0/0:32,0:31:7.36:0,7,82	0/0:13,0:12:2.98:0,3,21	0/0:11,0:11:12.01:0,12,114	0/0:24,0:25:26.38:0,26,294	0/0:34,0:32:26.88:0,27,418	0/0:27,0:28:32.18:0,32,423	0/0:22,0:22:26.78:0,27,395	0/0:29,0:32:53.73:0,54,1025	0/0:20,0:18:11.05:0,11,182	0/0:24,0:24:30.85:0,31,367	0/0:17,0:17:10.09:0,10,73	0/0:7,0:8:11.51:0,12,192
chr10	3298894	.	TG	T	808.02	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=6.559;DP=604;FS=6.749;HRun=4;HaplotypeScore=75.4028;InbreedingCoeff=0.8041;MQ=65.40;MQ0=2;MQRankSum=0.935;QD=7.92;ReadPosRankSum=-1.051;VQSLOD=-0.1801;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:27:10.45:10,0,49	0/0:12,0:12:36:0,36,459	0/0:19,0:11:26.58:0,27,287	0/0:15,0:7:5.67:0,6,53	0/0:24,0:24:66.16:0,66,847	0/0:22,0:22:62.82:0,63,809	0/0:24,0:24:66.19:0,66,874	1/1:4,28:32:67.38:831,67,0	0/0:15,0:15:45.12:0,45,582	0/0:29,0:29:84.69:0,85,1064	0/0:26,0:26:75.19:0,75,972	0/0:19,0:19:51.13:0,51,657	0/0:18,0:18:48.14:0,48,652	0/0:11,0:11:27.07:0,27,358	0/0:42,0:42:99:0,108,1003	0/0:23,0:23:66.21:0,66,906	0/0:26,0:26:69.19:0,69,924	0/0:17,0:17:45.03:0,45,415	0/0:30,0:30:90.21:0,90,1126	0/0:25,0:25:66.16:0,66,845	0/0:14,0:14:39.08:0,39,491	0/0:15,0:15:42.12:0,42,562	0/0:19,0:19:54.15:0,54,709	0/0:12,0:12:27.54:0,28,345	0/0:24,0:26:56.80:0,57,503	0/0:19,0:19:14.16:0,14,127	1/1:26,0:26:19.55:64,20,0	1/1:17,0:17:14.56:47,15,0
chr10	3298898	.	GT	G	1734.04	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=6.576;DP=611;FS=3.101;HRun=10;HaplotypeScore=72.6102;InbreedingCoeff=0.7813;MQ=66.01;MQ0=3;MQRankSum=0.230;QD=14.33;ReadPosRankSum=0.673;VQSLOD=4.0226;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,23:27:44.96:390,45,0	0/0:12,0:12:33.09:0,33,365	0/0:24,0:13:17.71:0,18,196	0/0:15,0:7:0.77:0,1,29	0/0:24,0:24:64.23:0,64,647	0/0:22,0:22:54.06:0,54,617	0/0:23,0:23:60.11:0,60,649	0/1:32,0:32:21.74:115,0,22	0/0:15,0:16:41.93:0,42,437	0/0:30,0:30:50.39:0,50,759	0/0:27,0:27:69.12:0,69,731	0/0:19,0:19:45.10:0,45,486	0/0:17,0:17:48.10:0,48,515	0/0:10,0:10:27.06:0,27,290	0/0:6,0:43:88.22:0,88,450	0/0:22,0:23:69:0,69,728	0/0:23,0:23:63.16:0,63,691	0/0:2,0:17:36.93:0,37,185	0/0:34,0:35:78.01:0,78,817	0/0:23,0:23:57.13:0,57,611	0/0:13,0:13:30.07:0,30,324	0/0:16,0:16:42.08:0,42,439	0/0:18,0:18:50.50:0,51,539	0/0:12,1:13:3.99:0,4,253	0/0:7,0:27:39.67:0,40,200	1/1:4,17:21:20.77:403,21,0	1/1:1,24:25:68.98:599,69,0	1/1:0,16:16:44.99:390,45,0
chr10	3300487	.	TA	T	1581.32	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=9.220;DP=678;FS=6.116;HRun=1;HaplotypeScore=82.0579;InbreedingCoeff=0.9842;MQ=67.57;MQ0=0;MQRankSum=-4.374;QD=37.65;ReadPosRankSum=2.355;VQSLOD=4.3060;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,42:42:99:1676,120,0	0/0:6,0:6:18.06:0,18,288	0/0:16,0:14:42.14:0,42,638	0/0:23,0:21:60.14:0,60,862	0/0:23,0:23:69.20:0,69,1046	0/0:20,0:20:57.16:0,57,861	0/0:30,0:30:90.29:0,90,1406	0/0:40,0:40:99:0,120,1893	0/0:21,0:21:63.21:0,63,1006	0/0:30,0:30:90.29:0,90,1414	0/0:19,0:19:57.19:0,57,909	0/0:19,0:19:54.18:0,54,860	0/0:35,0:35:99:0,105,1642	0/0:21,0:21:60.19:0,60,936	0/0:32,0:32:93.30:0,93,1462	0/0:17,0:17:51.17:0,51,813	0/0:17,0:17:51.15:0,51,776	0/0:19,0:19:57.14:0,57,866	0/0:17,0:17:51.10:0,51,721	0/0:31,0:31:93.32:0,93,1487	0/0:34,0:34:99:0,102,1578	0/0:28,0:28:84.29:0,84,1338	0/0:28,0:28:81.28:0,81,1294	0/0:21,0:21:63.20:0,63,982	0/0:25,0:25:75.26:0,75,1199	0/0:26,0:26:78.25:0,78,1203	0/0:32,0:32:96.31:0,96,1507	0/0:6,0:6:18.06:0,18,288
chr10	3300664	.	TGGGGG	T	5365.37	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=1.064;DP=388;FS=11.831;HRun=13;HaplotypeScore=80.7857;InbreedingCoeff=0.7943;MQ=72.74;MQ0=1;MQRankSum=-3.028;QD=38.88;ReadPosRankSum=9.740;VQSLOD=1.6520;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,30:34:78.23:1335,78,0	0/0:7,0:7:12.04:0,12,202	0/0:25,0:20:30.14:0,30,450	0/0:19,0:13:19.93:0,20,375	0/0:13,0:13:20.59:0,21,457	0/0:5,0:5:9.03:0,9,165	0/0:8,0:13:21.07:0,21,372	0/0:4,0:7:6.01:0,6,62	0/0:9,0:9:6.02:0,6,119	0/0:6,0:6:15.05:0,15,279	0/0:3,0:4:6.02:0,6,137	0/0:12,0:12:12.04:0,12,212	0/0:18,0:18:24.08:0,24,431	0/0:11,0:12:15.05:0,15,296	1/1:3,22:25:54.15:925,54,0	0/0:9,0:11:17.42:0,17,309	1/1:5,30:35:72.15:1233,72,0	1/1:2,13:15:39.13:668,39,0	0/0:5,0:5:3.01:0,3,45	0/0:3,0:7:12.04:0,12,169	0/0:5,0:10:9.03:0,9,181	0/0:8,0:11:15.05:0,15,324	0/0:4,0:9:12.03:0,12,164	0/0:13,0:16:21.37:0,21,312	1/1:4,25:29:72.22:1205,72,0	0/0:6,0:7:3.01:0,3,42	0/0:8,0:16:30.09:0,30,459	0/0:5,0:7:12.04:0,12,257
chr10	3302476	.	CA	C	282.24	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=4.060;DP=507;FS=2.188;HRun=8;HaplotypeScore=53.3421;InbreedingCoeff=0.7175;MQ=70.12;MQ0=0;MQRankSum=-1.648;QD=11.76;ReadPosRankSum=1.547;VQSLOD=2.4342;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,13:13:39.06:377,39,0	0/0:10,0:10:27.08:0,27,326	0/0:14,1:10:14.24:0,14,186	0/1:11,0:9:1.37:1,0,141	0/0:20,0:20:51.16:0,51,616	0/0:25,0:25:75.23:0,75,906	0/0:11,0:11:27.06:0,27,304	0/0:30,0:30:87.25:0,87,1031	0/0:11,0:11:33.10:0,33,399	0/0:15,0:15:42.13:0,42,507	0/0:22,0:22:63.19:0,63,761	0/0:14,0:14:42.13:0,42,507	0/0:24,0:24:69.21:0,69,827	0/0:11,0:11:33.10:0,33,399	0/0:16,0:16:48.11:0,48,549	0/0:20,0:20:57.17:0,57,688	0/0:25,0:25:66.66:0,67,781	0/0:18,0:18:48.15:0,48,575	0/0:15,0:13:39.07:0,39,437	0/0:31,0:31:90.26:0,90,1066	0/0:9,0:9:24.03:0,24,262	0/0:16,0:16:42.13:0,42,507	0/0:28,0:28:75.22:0,75,894	0/0:3,0:3:9.03:0,9,109	0/0:16,0:16:48.08:0,48,531	0/0:29,0:29:84.24:0,84,994	0/0:30,0:28:87.25:0,87,1037	0/0:19,0:19:57.17:0,57,689
chr10	3303032	.	CTGTGTGTGTGTGTGTGTG	C	6375.15	PASS	AB=0.615;AC=6;AF=0.107;AN=56;BaseQRankSum=11.076;DP=760;FS=18.087;HRun=0;HaplotypeScore=346.0342;InbreedingCoeff=0.6237;MQ=59.25;MQ0=6;MQRankSum=-7.964;QD=61.89;ReadPosRankSum=1.949;VQSLOD=2.8587;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:27:29.94:0,30,730	0/0:11,0:14:30.05:0,30,1830	0/0:29,0:17:30.10:0,30,1177	0/0:27,0:16:30.10:0,30,857	0/0:22,0:23:63.19:0,63,3894	0/0:22,0:24:57.20:0,57,3518	0/0:24,0:24:60.19:0,60,3536	0/1:15,15:29:26.01:811,0,26	0/0:32,0:33:69.19:0,69,4611	0/0:27,0:29:66.21:0,66,3799	0/0:22,0:21:51.18:0,51,3770	0/0:30,0:30:74.01:0,74,5024	0/0:34,0:35:90.30:0,90,6422	0/0:32,0:33:66.20:0,66,3760	0/0:12,0:32:51.15:0,51,2644	0/0:31,0:32:66.19:0,66,4288	0/0:17,0:17:18.06:0,18,534	0/0:18,0:23:54.15:0,54,3050	0/0:24,0:25:60.17:0,60,2977	0/0:28,0:30:48.16:0,48,3209	0/0:42,0:44:99:0,105,6134	0/0:33,0:33:75.26:0,75,4997	0/0:14,0:25:33.11:0,33,2017	0/0:19,0:20:44.95:0,45,3514	0/0:8,0:22:39.13:0,39,2665	0/1:7,24:31:37.77:2302,0,38	1/1:7,23:30:42.14:2076,42,0	1/1:0,12:12:24.08:1187,24,0
chr10	3304412	.	ATG	A	58.78	PASS	AC=4;AF=0.087;AN=46;BaseQRankSum=3.405;DP=405;FS=5.112;HRun=0;HaplotypeScore=48.5063;InbreedingCoeff=0.8664;MQ=56.44;MQ0=2;MQRankSum=-3.420;QD=3.67;ReadPosRankSum=-0.441;VQSLOD=1.3142;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:13,0:13:39.10:0,39,651	./.	./.	0/0:23,0:23:69.21:0,69,1171	0/0:20,0:20:57.12:0,57,910	0/0:10,0:9:18.95:0,19,331	0/0:46,0:46:99:0,132,1909	0/0:11,0:11:27.06:0,27,433	0/0:28,0:27:72.19:0,72,1166	0/0:17,0:17:42.14:0,42,768	0/0:13,0:13:36.08:0,36,552	0/0:13,0:13:39.08:0,39,646	0/0:14,0:14:36.06:0,36,537	./.	0/0:15,0:15:45.13:0,45,764	1/1:4,9:10:5.98:72,6,0	1/1:0,3:3:6.02:85,6,0	0/0:29,0:26:78.18:0,78,1209	0/0:14,0:14:42.10:0,42,670	0/0:9,0:8:21.04:0,21,323	0/0:6,0:6:18.03:0,18,261	0/0:7,0:7:21.06:0,21,354	0/0:11,0:11:33.08:0,33,543	./.	0/0:28,0:27:81.17:0,81,1371	0/0:21,0:21:51.16:0,51,887	0/0:13,0:13:39.11:0,39,676
chr10	3304496	.	ATATGTGTGTGTGTGTG	A	269.26	PASS	AB=1.000;AC=5;AF=0.109;AN=46;BaseQRankSum=5.005;DP=365;FS=2.161;HRun=0;HaplotypeScore=111.3117;InbreedingCoeff=0.6405;MQ=43.18;MQ0=50;MQRankSum=-4.019;QD=5.39;ReadPosRankSum=-2.193;VQSLOD=2.0214;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:9,0:4:1.82:5,2,0	0/0:6,0:6:18.05:0,18,592	./.	./.	0/0:17,0:17:23.97:0,24,446	0/0:21,0:19:42.53:0,43,1159	0/0:12,0:7:13.29:0,13,493	1/1:10,23:14:38.47:358,38,0	0/0:9,0:8:15.02:0,15,384	0/0:23,0:19:50.17:0,50,1081	0/0:12,0:12:11.98:0,12,317	0/0:12,0:11:21.03:0,21,577	0/0:12,0:8:15.04:0,15,536	0/0:12,0:9:18.03:0,18,369	./.	0/0:9,0:9:21.04:0,21,738	./.	0/1:8,0:6:10.60:11,0,11	0/0:17,0:9:27.02:0,27,666	0/0:16,0:13:30.06:0,30,984	0/0:18,0:10:13.65:0,14,356	0/0:8,0:8:15.05:0,15,629	0/0:14,0:12:18.03:0,18,475	0/0:16,0:13:27.08:0,27,922	./.	0/0:30,0:24:60.73:0,61,1512	0/0:15,0:13:18.43:0,18,382	0/0:15,0:12:36.09:0,36,1017
chr10	3304498	.	ATG	A	103.84	PASS	AB=0.934;AC=12;AF=0.286;AN=42;BaseQRankSum=2.317;DP=381;FS=0.000;HRun=0;HaplotypeScore=55.1979;InbreedingCoeff=-0.2618;MQ=43.32;MQ0=52;MQRankSum=0.357;QD=0.69;ReadPosRankSum=-0.976;VQSLOD=1.0138;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,0:4:0.89:2,1,0	0/1:6,0:6:1.20:1,0,124	./.	./.	0/1:15,3:18:23.74:24,0,54	0/1:22,1:21:28.40:28,0,243	0/0:12,0:7:9.03:0,9,130	./.	0/1:8,2:9:34.82:35,0,75	0/0:24,0:20:15.04:0,15,205	0/0:13,0:13:8.06:0,8,95	0/1:10,2:11:20.68:21,0,120	0/0:12,0:8:9.03:0,9,132	0/1:13,0:10:13.54:14,0,58	./.	0/0:9,0:9:15.05:0,15,223	./.	./.	0/0:15,0:8:9.03:0,9,122	0/1:17,0:14:6.25:6,0,200	0/0:19,0:11:6.49:0,6,89	0/1:9,0:9:6.59:7,0,156	0/1:16,1:14:20.71:21,0,100	0/1:14,2:13:66.91:67,0,116	./.	0/0:28,0:25:10.19:0,10,214	0/0:15,0:13:11.98:0,12,102	0/0:13,0:13:32.98:0,33,338
chr10	3304632	.	G	GT	332.27	PASS	AB=1.000;AC=4;AF=0.083;AN=48;BaseQRankSum=-0.659;DP=348;FS=11.554;HRun=10;HaplotypeScore=52.6923;InbreedingCoeff=0.3320;MQ=67.54;MQ0=11;MQRankSum=-3.992;QD=4.96;ReadPosRankSum=-2.206;VQSLOD=-0.1962;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	0/0:9,0:9:23.91:0,24,187	0/0:25,0:8:4.46:0,4,42	0/1:29,0:21:21.41:21,0,63	0/0:14,1:15:5.22:0,5,242	0/0:19,0:17:38.94:0,39,320	0/0:14,0:15:37.95:0,38,295	1/1:12,9:23:44.59:411,45,0	0/0:8,0:8:10.61:0,11,97	0/0:29,0:28:33.92:0,34,485	0/0:16,0:16:38.92:0,39,315	0/0:11,0:11:20.96:0,21,171	0/0:13,0:12:29.91:0,30,238	0/0:16,0:13:29.96:0,30,246	./.	0/0:6,0:6:14.98:0,15,123	0/0:5,0:2:2.98:0,3,22	./.	0/0:19,0:16:31.48:0,31,246	0/0:12,0:13:34.61:0,35,270	0/0:11,0:10:23.96:0,24,197	0/0:5,0:4:11.99:0,12,99	0/0:5,0:4:11.99:0,12,99	0/0:14,0:12:35.68:0,36,278	./.	0/0:19,1:19:18.93:0,19,356	0/1:14,0:14:7.51:8,0,148	0/0:6,0:5:11.94:0,12,93
chr10	3305613	.	G	GC	3459.33	PASS	AB=0.683;AC=11;AF=0.196;AN=56;BaseQRankSum=-11.424;DP=755;FS=0.780;HRun=9;HaplotypeScore=82.2842;InbreedingCoeff=0.7076;MQ=84.91;MQ0=0;MQRankSum=-2.833;QD=18.21;ReadPosRankSum=-0.056;VQSLOD=3.5832;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:18,31:49:46.14:737,46,0	0/0:15,0:15:44.97:0,45,385	0/0:24,0:24:30.20:0,30,391	0/0:30,0:29:59.20:0,59,481	0/0:27,0:27:65.97:0,66,573	0/0:20,1:21:28.89:0,29,417	0/0:30,0:30:83.98:0,84,729	1/1:7,16:23:19.04:426,19,0	0/0:38,0:38:95.93:0,96,829	0/0:29,1:29:47.79:0,48,641	0/0:16,0:16:38.98:0,39,338	0/0:26,0:26:68.98:0,69,599	0/0:31,0:31:83.97:0,84,729	0/0:28,0:28:77.97:0,78,677	1/1:4,27:31:75.20:830,75,0	0/0:35,0:35:81.84:0,82,702	0/1:7,19:26:18:504,0,18	0/1:4,16:20:3.98:414,0,4	0/1:10,1:11:3.15:3,0,204	0/0:22,0:23:56.01:0,56,475	0/0:45,0:45:99:0,102,884	0/0:19,0:19:44.98:0,45,390	0/0:27,0:27:74.94:0,75,645	0/0:36,0:36:86.86:0,87,740	1/1:7,23:30:8.05:545,8,0	0/0:3,0:40:70.39:0,70,211	0/0:2,0:16:26.48:0,26,78	0/0:0,0:7:14.26:0,14,42
chr10	3306772	.	AT	A	981.48	PASS	AB=0.855;AC=16;AF=0.286;AN=56;BaseQRankSum=9.826;DP=622;FS=0.405;HRun=14;HaplotypeScore=72.4815;InbreedingCoeff=0.3416;MQ=69.00;MQ0=1;MQRankSum=1.484;QD=3.96;ReadPosRankSum=4.855;VQSLOD=0.5996;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,5:39:35.19:0,35,658	0/1:9,3:12:11.14:11,0,189	0/0:19,0:14:17.80:0,18,146	0/0:17,0:12:10.44:0,10,59	0/0:29,1:30:39.66:0,40,473	0/0:23,0:24:46.88:0,47,402	0/1:23,1:25:3.88:4,0,280	0/0:32,2:35:21.76:0,22,464	0/1:16,2:18:2.19:2,0,255	0/0:17,1:21:20.48:0,20,331	0/0:14,0:15:17.16:0,17,181	0/0:27,0:30:8.04:0,8,385	0/0:21,2:23:33.40:0,33,431	0/0:10,0:11:14.05:0,14,140	1/1:6,19:26:40.64:273,41,0	0/0:25,0:25:69.02:0,69,628	1/1:7,19:31:58.65:373,59,0	1/1:3,17:25:45.87:276,46,0	0/1:17,4:21:31.36:31,0,280	0/1:19,2:21:0.91:1,0,244	0/1:11,4:16:32.17:32,0,174	0/0:14,0:14:20.28:0,20,232	0/0:12,3:15:9.26:0,9,207	0/0:25,4:31:9.23:0,9,509	1/1:4,10:15:16.88:109,17,0	0/1:19,4:25:29.45:29,0,322	0/0:21,2:25:35.24:0,35,461	0/1:11,2:13:12.95:13,0,154
chr10	3307703	.	G	GCTGGC	4643.12	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-6.850;DP=575;FS=10.058;HRun=0;HaplotypeScore=104.2420;InbreedingCoeff=0.9487;MQ=92.54;MQ0=0;MQRankSum=-4.339;QD=41.46;ReadPosRankSum=2.616;VQSLOD=4.1907;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,6:29:15.01:369,15,0	0/0:11,0:11:33.11:0,33,693	0/0:21,0:21:60.20:0,60,1201	0/0:31,0:31:81.21:0,81,1556	0/0:9,0:9:15.05:0,15,318	0/0:21,0:21:48.13:0,48,919	0/0:31,0:31:87.26:0,87,1750	0/0:28,0:28:74.84:0,75,1514	0/0:20,0:20:60.19:0,60,1234	0/0:28,0:28:69.22:0,69,1407	0/0:7,0:7:9.03:0,9,191	0/0:27,0:27:78.27:0,78,1658	0/0:23,0:23:69.24:0,69,1449	0/0:12,0:12:36.12:0,36,764	1/1:0,15:21:36.12:1059,36,0	0/0:23,0:23:69.22:0,69,1414	1/1:2,19:25:51.18:1590,51,0	1/1:2,17:24:51.18:1585,51,0	0/0:9,0:9:21.07:0,21,446	0/0:15,0:15:27.09:0,27,562	0/0:39,0:39:99:0,102,1825	0/0:13,0:13:27.09:0,27,572	0/0:8,0:8:14.94:0,15,256	0/0:31,0:31:90.31:0,90,1899	1/1:4,0:13:5.93:40,6,0	0/0:19,0:19:42.13:0,42,831	0/0:26,0:26:75.26:0,75,1587	0/0:11,0:11:33.11:0,33,702
chr10	3307828	.	A	ACGCGCGCG	500.02	PASS	AB=0.976;AC=6;AF=0.111;AN=54;BaseQRankSum=3.808;DP=542;FS=7.607;HRun=0;HaplotypeScore=143.3532;InbreedingCoeff=0.4680;MQ=67.87;MQ0=3;MQRankSum=-3.163;QD=6.17;ReadPosRankSum=-3.623;VQSLOD=0.7178;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:8,0:8:14.72:0,15,304	0/0:9,0:8:6.02:0,6,127	0/0:24,0:17:9:0,9,100	0/0:16,0:16:33.10:0,33,807	0/0:24,0:24:40.19:0,40,1108	0/0:35,0:34:66.19:0,66,1512	1/1:21,0:21:17.79:262,18,0	0/0:13,0:13:24.07:0,24,549	0/0:27,0:28:58.88:0,59,1194	0/0:12,0:12:24.08:0,24,522	0/0:19,0:19:42.14:0,42,1032	0/0:24,0:24:48.15:0,48,1161	0/0:22,0:22:36.12:0,36,929	0/0:8,0:8:0.47:0,0,1	0/0:16,0:16:33.10:0,33,772	0/1:19,0:19:24.55:140,0,25	0/1:20,0:20:35:196,0,35	0/0:12,0:12:18.05:0,18,367	0/0:11,0:11:10.58:0,11,242	0/0:54,0:54:99:0,117,2682	0/0:6,0:6:12.04:0,12,253	0/0:9,0:9:14.80:0,15,387	0/0:36,0:36:75.20:0,75,1767	1/1:20,0:18:2.45:23,2,0	0/0:21,0:21:31.08:0,31,798	0/0:23,0:22:33.11:0,33,767	0/0:11,0:11:11.35:0,11,296
chr10	3307835	.	C	CGT	78.08	PASS	AB=0.810;AC=2;AF=0.037;AN=54;BaseQRankSum=3.949;DP=507;FS=3.667;HRun=0;HaplotypeScore=79.5071;InbreedingCoeff=0.1312;MQ=59.19;MQ0=4;MQRankSum=-2.769;QD=2.52;ReadPosRankSum=-1.557;VQSLOD=1.5745;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:9,0:9:20.63:0,21,265	0/0:5,0:4:6:0,6,65	0/0:16,0:9:13.13:0,13,63	0/0:14,0:14:36.11:0,36,492	0/0:24,0:24:54.13:0,54,758	0/0:38,0:37:87.06:0,87,1123	0/1:5,8:12:32.12:144,0,32	0/0:12,0:12:29.62:0,30,379	0/0:25,0:26:58.21:0,58,896	0/0:13,0:13:10.81:0,11,259	0/0:26,0:26:57.28:0,57,701	0/0:21,0:21:57.06:0,57,740	0/0:22,0:22:51.04:0,51,630	0/0:4,0:4:0:0,0,0	0/0:12,0:12:36.08:0,36,502	0/1:18,0:17:14.42:21,0,14	0/0:16,0:16:6.03:0,6,71	0/0:7,0:7:20.98:0,21,278	0/0:11,0:11:23.86:0,24,219	0/0:61,0:61:99:0,129,1715	0/0:12,0:12:32.85:0,33,309	0/0:9,0:9:23.93:0,24,282	0/0:35,0:35:87.19:0,87,1178	0/0:19,0:17:6.48:0,6,65	0/0:21,0:21:50.96:0,51,616	0/0:18,0:17:33.11:0,33,456	0/0:9,0:9:20.49:0,20,214
chr10	3307838	.	GCA	G	515.64	PASS	AB=0.921;AC=20;AF=0.435;AN=46;BaseQRankSum=4.773;DP=499;FS=16.583;HRun=0;HaplotypeScore=68.1400;InbreedingCoeff=-0.2412;MQ=56.27;MQ0=6;MQRankSum=-0.122;QD=1.39;ReadPosRankSum=-0.270;VQSLOD=-0.1316;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/1:9,0:9:14.50:14,0,60	./.	./.	0/1:12,2:14:21.33:21,0,122	0/1:21,2:23:25.86:26,0,333	0/1:30,9:38:41.57:42,0,405	./.	0/0:10,0:10:12.34:0,12,177	0/1:24,1:25:19.39:19,0,269	0/0:8,0:13:5.61:0,6,52	0/1:25,2:28:99:109,0,226	0/0:19,0:19:21.05:0,21,293	0/1:17,4:21:9.61:10,0,224	./.	0/1:11,3:14:84.21:84,0,221	0/0:17,0:16:4.63:0,5,16	0/1:17,0:17:12.47:12,0,16	0/0:7,0:7:6.02:0,6,91	0/0:11,0:11:6.69:0,7,60	0/1:47,12:59:33.95:34,0,720	0/1:11,0:11:73.88:74,0,90	0/1:10,0:10:5.51:6,0,143	0/1:33,2:36:42.31:42,0,317	0/1:17,0:15:0.01:0,0,0	1/1:13,0:21:11.58:63,12,0	1/1:9,0:17:11.48:61,11,0	1/1:6,0:9:8.04:42,8,0
chr10	3307894	.	AGCGGCGGTGGTGGTGGCG	A	30.42	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-0.334;DP=425;FS=0.000;HRun=0;HaplotypeScore=192.4472;InbreedingCoeff=0.7215;MQ=60.55;MQ0=0;MQRankSum=-2.270;QD=6.08;ReadPosRankSum=0.140;VQSLOD=2.4648;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,5:5:3.01:108,3,0	0/0:8,0:8:24.05:0,24,1579	0/0:16,0:12:27.09:0,27,1506	0/0:17,0:11:30.09:0,30,1198	0/0:15,0:15:39.13:0,39,2617	0/0:13,0:13:31.92:0,32,1581	0/0:25,0:25:57.18:0,57,3238	0/0:18,0:18:36.11:0,36,1472	0/0:9,0:9:24.08:0,24,1692	0/0:12,0:12:33.11:0,33,1913	0/0:8,0:8:20.96:0,21,1316	0/0:29,0:29:87.30:0,87,6301	0/0:9,0:9:15.04:0,15,648	0/0:22,0:22:51.18:0,51,3801	0/0:5,0:5:12.04:0,12,553	0/0:7,0:7:21.07:0,21,1367	0/0:10,0:10:24.08:0,24,1149	0/0:21,0:21:48.16:0,48,2439	0/0:11,0:11:24.08:0,24,1416	0/0:12,0:12:33.11:0,33,2397	0/0:44,0:44:99:0,106,7540	0/0:17,0:17:43.39:0,43,3238	0/0:8,0:8:18.06:0,18,1455	0/0:27,0:27:72.25:0,72,4404	0/0:10,0:10:18.06:0,18,925	0/0:18,0:18:45.14:0,45,2927	0/0:19,0:19:48.15:0,48,3193	0/0:9,0:9:27.09:0,27,1598
chr10	3307908	.	TGGC	T	1257.44	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=5.273;DP=392;FS=21.064;HRun=0;HaplotypeScore=63.5730;InbreedingCoeff=0.9244;MQ=67.32;MQ0=0;MQRankSum=-3.209;QD=30.67;ReadPosRankSum=4.760;VQSLOD=1.7952;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:5:2.88:0,3,15	0/0:8,0:8:24.07:0,24,443	0/0:14,0:12:36.04:0,36,652	0/0:17,0:16:35.64:0,36,509	0/0:13,0:13:39.12:0,39,775	0/0:10,0:10:18.06:0,18,376	0/0:17,0:17:45.01:0,45,886	0/0:20,0:20:46.26:0,46,743	0/0:8,0:8:20.85:0,21,367	0/0:14,0:14:35.90:0,36,608	0/0:8,0:8:18.06:0,18,379	0/0:27,0:27:72.23:0,72,1538	0/0:5,0:5:15:0,15,264	0/0:21,0:21:57.11:0,57,1163	1/1:0,5:5:12.04:179,12,0	0/0:7,0:7:17.89:0,18,340	1/1:0,7:7:18.06:288,18,0	1/1:0,20:20:45.15:704,45,0	0/0:14,0:14:38.80:0,39,581	0/0:13,0:13:30.10:0,30,658	0/0:37,0:37:89.95:0,90,1934	0/0:13,0:13:36.12:0,36,789	0/0:10,0:10:24.03:0,24,403	0/0:23,0:23:63.11:0,63,1247	1/1:2,7:9:15.05:241,15,0	0/0:18,0:18:48.11:0,48,929	0/0:20,0:20:54.18:0,54,1103	0/0:9,0:9:23.92:0,24,387
chr10	3309460	.	ACCC	A	6151.41	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=13.095;DP=704;FS=2.550;HRun=6;HaplotypeScore=101.3193;InbreedingCoeff=0.9998;MQ=87.31;MQ0=0;MQRankSum=-4.238;QD=38.93;ReadPosRankSum=5.165;VQSLOD=3.5030;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,35:39:87.29:1386,87,0	0/0:12,0:12:33.11:0,33,743	0/0:26,0:26:63.22:0,63,1327	0/0:29,0:29:75.17:0,75,1584	0/0:20,0:20:57.20:0,57,1268	0/0:17,0:17:39.13:0,39,883	0/0:25,0:25:72.23:0,72,1510	0/0:24,0:24:60.19:0,60,1230	0/0:27,0:27:78.27:0,78,1741	0/0:26,0:26:78.26:0,78,1710	0/0:16,0:16:45.15:0,45,1016	0/0:28,0:28:84.28:0,84,1825	0/0:16,0:16:45.15:0,45,1001	0/0:30,0:30:81.28:0,81,1829	1/1:1,31:32:84.29:1342,84,0	0/0:32,0:32:96.33:0,96,2145	1/1:2,42:44:40.37:1605,40,0	1/1:0,25:25:66.23:1055,66,0	0/0:18,0:18:51.17:0,51,1101	0/0:19,0:19:57.20:0,57,1240	0/0:47,0:46:99:0,135,3001	0/0:20,0:20:57.20:0,57,1290	0/0:20,0:20:60.21:0,60,1359	0/0:25,0:25:66.21:0,66,1446	1/1:2,16:18:48.16:763,48,0	0/0:30,0:30:90.30:0,90,1961	0/0:26,0:26:78.27:0,78,1744	0/0:13,0:13:30.10:0,30,658
chr10	3313057	.	GAC	G	1081.09	PASS	AB=1.000;AC=22;AF=0.393;AN=56;BaseQRankSum=4.579;DP=596;FS=6.464;HRun=0;HaplotypeScore=96.8982;InbreedingCoeff=-0.0515;MQ=69.78;MQ0=12;MQRankSum=3.729;QD=2.97;ReadPosRankSum=2.823;VQSLOD=1.0048;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:29:27.30:196,27,0	0/1:8,0:8:11.06:52,0,11	0/0:27,0:20:2.98:0,3,21	0/0:33,0:25:2.60:0,3,10	0/0:20,0:20:14.73:0,15,113	0/1:26,0:26:51.60:52,0,146	0/1:30,0:30:22.89:23,0,141	0/1:31,0:30:50.65:51,0,86	0/0:24,0:21:20.95:0,21,177	0/1:27,0:27:4:4,0,165	0/0:15,0:14:8.90:0,9,63	0/1:23,0:22:14.43:14,0,140	0/1:19,0:19:15.25:15,0,123	0/1:15,0:15:46.74:47,0,63	1/1:16,4:21:25.27:172,25,0	0/1:25,0:24:68.87:69,0,92	1/1:15,0:16:17.79:120,18,0	0/1:12,0:12:8.77:78,0,9	0/1:24,0:24:53.49:53,0,94	0/1:9,0:9:5:61,0,5	0/1:24,0:24:80.93:81,0,119	0/0:25,0:25:17.66:0,18,195	0/1:12,0:11:9.43:9,0,77	0/0:34,0:34:9.15:0,9,247	1/1:12,0:12:20.43:157,20,0	0/0:25,0:24:47.11:0,47,347	0/0:21,0:18:29.80:0,30,232	0/0:7,0:6:5.87:0,6,39
chr10	3313093	.	CAGAG	C	3751.44	PASS	AB=0.835;AC=29;AF=0.558;AN=52;BaseQRankSum=-6.104;DP=619;FS=53.215;HRun=0;HaplotypeScore=136.4623;InbreedingCoeff=0.7254;MQ=48.38;MQ0=15;MQRankSum=4.682;QD=9.00;ReadPosRankSum=0.625;VQSLOD=0.8211;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:21.02:0,21,320	1/1:11,0:11:11.87:154,12,0	./.	./.	0/0:24,0:24:0:0,0,0	1/1:26,0:25:9.02:133,9,0	1/1:30,0:29:17.89:240,18,0	0/0:24,0:22:24.08:0,24,307	1/1:31,0:27:34.95:489,35,0	1/1:20,8:27:22.08:296,22,0	0/1:12,6:17:0:0,0,0	1/1:27,0:26:24.08:351,24,0	1/1:20,0:20:17.72:248,18,0	1/1:27,0:27:26.75:381,27,0	0/0:29,0:29:26.24:0,26,383	1/1:20,0:19:14.31:217,14,0	0/1:23,0:23:3.35:3,0,400	0/0:12,0:11:9.03:0,9,169	1/1:17,0:16:8.99:126,9,0	0/1:7,8:15:0:0,0,0	1/1:39,0:37:39.10:545,39,0	0/1:22,0:22:0.04:0,0,0	0/1:17,7:22:0.11:0,0,1	1/1:39,0:39:39.13:567,39,0	0/0:19,0:18:5.23:0,5,74	0/0:30,0:29:39.13:0,39,613	0/0:23,0:21:27.09:0,27,436	0/0:4,0:3:0:0,0,0
chr10	3313996	.	A	AT	7170.35	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-15.304;DP=810;FS=19.737;HRun=2;HaplotypeScore=72.1234;InbreedingCoeff=0.9926;MQ=80.42;MQ0=0;MQRankSum=-2.279;QD=39.40;ReadPosRankSum=2.136;VQSLOD=2.9388;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,48:48:99:1987,138,0	0/0:6,0:6:12.04:0,12,149	0/0:22,0:22:59.51:0,60,721	0/0:21,0:21:60.17:0,60,729	0/0:33,0:33:87.25:0,87,1062	0/0:26,0:26:75.22:0,75,916	0/0:38,0:38:99:0,111,1359	0/0:30,0:30:81.22:0,81,960	0/0:22,1:23:26.01:0,26,775	0/0:25,0:25:75.21:0,75,908	0/0:15,0:15:45.14:0,45,558	0/0:25,0:25:75.20:0,75,903	0/0:26,0:26:72.19:0,72,865	0/0:28,0:28:78.22:0,78,942	1/1:2,51:53:99:2030,141,0	0/0:34,0:34:99:0,99,1214	1/1:1,34:35:90.30:1296,90,0	1/1:0,25:25:72.24:1037,72,0	0/0:26,0:26:75.24:0,75,928	0/0:33,0:33:81.25:0,81,1003	0/0:38,0:38:99:0,108,1339	0/0:23,0:23:66.19:0,66,805	0/0:30,0:30:90.28:0,90,1115	0/0:47,0:47:99:0,132,1635	1/1:0,21:21:57.19:820,57,0	0/0:31,0:31:87.27:0,87,1068	0/0:31,0:31:84.26:0,84,1041	0/0:17,0:17:51.16:0,51,632
chr10	3314809	.	AC	A	839.30	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.411;DP=747;FS=5.257;HRun=2;HaplotypeScore=91.2053;InbreedingCoeff=0.9997;MQ=87.91;MQ0=0;MQRankSum=-3.143;QD=32.28;ReadPosRankSum=2.151;VQSLOD=3.5323;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,26:26:72.23:934,72,0	0/0:13,0:13:39.13:0,39,583	0/0:25,0:25:75.21:0,75,1092	0/0:28,0:28:75.25:0,75,1119	0/0:13,0:13:39.13:0,39,584	0/0:24,0:24:72.24:0,72,1077	0/0:36,0:36:99:0,108,1579	0/0:33,0:33:93.29:0,93,1340	0/0:37,0:37:99:0,111,1611	0/0:24,0:24:69.15:0,69,1017	0/0:17,0:17:51.15:0,51,724	0/0:35,0:35:99:0,99,1463	0/0:34,0:34:99:0,102,1487	0/0:31,0:31:93.30:0,93,1356	0/0:36,0:36:99:0,108,1595	0/0:29,0:29:84.22:0,84,1145	0/0:27,0:27:75.25:0,75,1122	0/0:22,0:22:66.21:0,66,967	0/0:22,0:22:66.22:0,66,989	0/0:22,0:22:66.21:0,66,968	0/0:52,0:52:99:0,150,2185	0/0:26,0:26:78.25:0,78,1137	0/0:18,0:18:51.16:0,51,744	0/0:30,0:30:90.26:0,90,1323	0/0:21,0:21:57.18:0,57,835	0/0:33,0:33:96.32:0,96,1420	0/0:21,0:21:63.21:0,63,943	0/0:12,0:12:36.12:0,36,539
chr10	3315619	.	A	ACAAAC	8366.24	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=15.237;DP=773;FS=6.340;HRun=0;HaplotypeScore=143.3305;InbreedingCoeff=0.9962;MQ=87.88;MQ0=0;MQRankSum=-15.846;QD=54.33;ReadPosRankSum=0.509;VQSLOD=5.0463;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,38:44:75.22:2048,75,0	0/0:12,0:12:36.11:0,36,740	0/0:33,0:33:96.24:0,96,1772	0/0:26,0:26:66.55:0,67,1182	0/0:25,0:25:69.21:0,69,1398	0/0:19,0:19:51.06:0,51,1019	0/0:26,0:26:75.23:0,75,1546	0/0:31,0:31:90.26:0,90,1716	0/0:36,0:36:99:0,105,2192	0/0:36,0:36:99:0,105,2171	0/0:19,0:19:57.20:0,57,1217	0/0:31,0:31:90.22:0,90,1784	0/0:30,0:30:90.30:0,90,1884	0/0:19,0:19:57.20:0,57,1221	1/1:0,40:42:96.33:2772,96,0	0/0:31,0:31:87.26:0,87,1723	1/1:1,26:27:48.11:1389,48,0	1/1:1,14:16:30.10:833,30,0	0/0:27,0:27:75.26:0,75,1618	0/0:27,0:27:81.24:0,81,1638	0/0:36,0:36:99:0,105,2139	0/0:35,0:35:99:0,105,2183	0/0:27,0:27:72.23:0,72,1509	0/0:25,0:25:69.16:0,69,1368	1/1:0,23:24:48.16:1324,48,0	0/0:35,0:35:99:0,102,1975	0/0:28,0:28:84.28:0,84,1784	0/0:5,0:5:15.05:0,15,325
chr10	3316580	.	T	TA	2677.95	PASS	AB=0.919;AC=11;AF=0.196;AN=56;BaseQRankSum=-10.173;DP=651;FS=3.478;HRun=11;HaplotypeScore=74.2428;InbreedingCoeff=0.8472;MQ=72.19;MQ0=0;MQRankSum=-1.855;QD=15.85;ReadPosRankSum=1.510;VQSLOD=4.6173;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:10,27:39:48.14:745,48,0	0/0:10,0:11:28.93:0,29,215	0/0:12,0:14:7.75:0,8,63	0/0:19,0:18:4.23:0,4,124	0/0:26,1:29:39.36:0,39,469	0/0:28,0:28:56.51:0,57,431	0/0:16,1:19:18.43:0,18,302	0/0:2,0:29:56.01:0,56,166	0/0:23,0:23:56.78:0,57,441	0/0:23,0:23:53.76:0,54,418	0/0:32,1:33:56.16:0,56,611	0/0:17,0:17:32.85:0,33,255	0/0:25,0:25:62.67:0,63,479	0/0:22,0:22:62.71:0,63,479	1/1:3,21:25:59.95:593,60,0	0/0:24,1:25:41.24:0,41,498	1/1:2,23:25:51.10:518,51,0	1/1:3,19:24:62.79:607,63,0	0/1:28,3:34:12.49:12,0,443	0/0:30,0:30:77.39:0,77,592	0/0:14,0:14:23.88:0,24,186	0/0:18,0:18:41.80:0,42,325	0/0:20,0:21:49.75:0,50,367	0/0:16,0:16:41.82:0,42,322	1/1:3,18:22:38.91:380,39,0	0/0:26,0:26:68.73:0,69,534	0/0:25,0:25:65.68:0,66,502	0/0:12,0:13:28.90:0,29,215
chr10	3317483	.	G	GCAATCAGGA	10381.66	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=6.781;DP=753;FS=25.528;HRun=0;HaplotypeScore=222.2655;InbreedingCoeff=0.9926;MQ=81.88;MQ0=0;MQRankSum=-13.196;QD=110.44;ReadPosRankSum=-0.561;VQSLOD=3.7951;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,10:15:45.15:2038,45,0	0/0:17,0:17:45.15:0,45,1357	0/0:27,0:28:74.46:0,74,1928	0/0:17,0:17:41.33:0,41,1061	0/0:34,0:34:93.30:0,93,2718	0/0:25,0:25:69.24:0,69,2082	0/0:35,0:35:96.31:0,96,2869	0/0:34,0:34:84.27:0,84,2415	0/0:28,0:28:81.24:0,81,2300	0/0:42,0:42:99:0,120,3535	0/0:21,0:21:57.18:0,57,1663	0/0:39,0:39:99:0,105,3154	0/0:28,0:28:84.25:0,84,2285	0/0:41,0:41:99:0,108,3051	1/1:10,17:27:66.12:2806,66,0	0/0:26,0:26:78.25:0,78,2301	1/1:11,6:17:36.12:1548,36,0	1/1:6,4:10:27.04:1004,27,0	0/0:27,0:27:72.16:0,72,1841	0/0:26,0:26:75.26:0,75,2297	0/0:57,0:57:99:0,163,4657	0/0:25,0:25:69.20:0,69,2041	0/0:14,0:14:36.11:0,36,1017	0/0:22,0:22:66.19:0,66,1814	1/1:9,16:25:69.24:2986,69,0	0/0:42,0:42:99:0,114,3345	0/0:27,0:27:78.27:0,78,2345	0/0:4,0:4:12.04:0,12,346
chr10	3317502	.	G	GGTTCCTGT	7746.01	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=9.054;DP=743;FS=2.789;HRun=0;HaplotypeScore=214.0196;InbreedingCoeff=0.9951;MQ=81.59;MQ0=0;MQRankSum=-12.642;QD=89.03;ReadPosRankSum=-1.031;VQSLOD=5.0113;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,7:16:33.09:1201,33,0	0/0:15,0:15:45.15:0,45,1286	0/0:28,0:29:72.22:0,72,1904	0/0:19,0:19:56.89:0,57,1304	0/0:34,0:34:99:0,100,2688	0/0:23,0:23:69.24:0,69,1937	0/0:41,0:41:99:0,123,3265	0/0:30,0:30:84.24:0,84,2149	0/0:28,0:28:81.26:0,81,2218	0/0:38,0:38:99:0,108,3015	0/0:26,0:26:75.23:0,75,1973	0/0:43,0:43:99:0,117,3236	0/0:29,0:29:81.26:0,81,2178	0/0:40,0:40:99:0,111,3036	1/1:11,12:23:48.16:1952,48,0	0/0:30,0:30:84.27:0,84,2252	1/1:4,11:15:39.12:1435,39,0	1/1:6,2:8:15.02:454,15,0	0/0:19,0:19:51.12:0,51,1290	0/0:25,0:25:72.25:0,72,2049	0/0:61,0:61:99:0,181,4879	0/0:28,0:28:84.28:0,84,2332	0/0:10,0:10:30.09:0,30,799	0/0:20,0:20:57.18:0,57,1549	1/1:6,18:25:72.19:2704,72,0	0/0:35,0:35:99:0,99,2764	0/0:26,0:26:75.26:0,75,2152	0/0:7,0:7:21.05:0,21,540
chr10	3317580	.	T	TGA	2657.52	PASS	AB=0.611;AC=9;AF=0.161;AN=56;BaseQRankSum=9.775;DP=720;FS=53.512;HRun=0;HaplotypeScore=141.0547;InbreedingCoeff=0.7907;MQ=58.55;MQ0=9;MQRankSum=-7.968;QD=24.84;ReadPosRankSum=1.765;VQSLOD=2.1048;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:15,15:30:18.16:596,18,0	0/0:15,0:15:36.08:0,36,454	0/0:32,0:12:17.65:0,18,173	0/0:34,0:12:19.80:0,20,200	0/0:21,0:21:50.72:0,51,571	0/0:17,0:17:38.99:0,39,447	0/0:38,0:38:71.99:0,72,843	0/0:46,0:45:99:0,114,1236	0/0:20,0:20:50.97:0,51,597	0/0:25,0:25:60.18:0,60,780	0/0:14,0:14:30.02:0,30,355	0/0:32,0:32:87.23:0,87,1114	0/0:20,0:20:51.02:0,51,566	0/0:38,0:38:99:0,102,1222	1/1:11,16:26:54.01:1039,54,0	0/0:21,0:21:54.06:0,54,619	1/1:8,15:23:12.43:642,12,0	1/1:8,4:13:1.11:231,1,0	0/0:22,0:20:43.80:0,44,413	0/0:17,0:17:48.55:0,49,633	0/0:75,0:72:99:0,167,1889	0/0:28,0:28:72.49:0,72,855	0/0:19,0:19:54.15:0,54,694	0/0:26,0:26:32.54:0,33,716	0/1:4,7:11:16.96:301,0,17	0/0:19,0:19:51.13:0,51,616	0/0:18,0:18:54.05:0,54,617	0/0:13,0:13:39.06:0,39,464
chr10	3317594	.	TAA	T	64.24	PASS	AB=0.829;AC=4;AF=0.071;AN=56;BaseQRankSum=7.093;DP=753;FS=5.935;HRun=2;HaplotypeScore=161.8266;InbreedingCoeff=-0.0857;MQ=52.52;MQ0=15;MQRankSum=-4.557;QD=0.70;ReadPosRankSum=0.244;VQSLOD=-0.7404;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:36,1:35:35.28:35,0,249	0/0:16,0:16:44.98:0,45,730	0/0:43,1:6:0.14:0,0,21	0/0:39,0:9:17.75:0,18,197	0/0:18,0:18:50.74:0,51,863	0/0:20,0:20:38.77:0,39,543	0/0:39,0:39:79.28:0,79,1195	0/0:45,0:44:99:0,103,1220	0/0:22,0:22:57.94:0,58,1003	0/0:24,0:24:72.03:0,72,1249	0/0:8,0:8:24.08:0,24,456	0/0:32,0:32:85.66:0,86,1404	0/0:17,0:16:5.57:0,6,537	0/0:40,0:40:99:0,113,2048	0/0:28,5:33:52.03:0,52,519	0/0:20,0:20:55.32:0,55,914	0/1:22,7:27:13.12:13,0,441	0/1:9,4:14:99:112,0,193	0/0:19,0:15:41.98:0,42,598	0/0:21,0:21:60.43:0,60,929	0/0:73,2:72:99:0,130,2781	0/0:31,0:31:78.73:0,79,1442	0/0:23,0:23:63.15:0,63,1027	0/0:24,1:25:61.45:0,61,1114	0/1:9,3:12:6.42:6,0,141	0/0:20,0:19:55.93:0,56,973	0/0:17,0:17:35.42:0,35,831	0/0:10,0:10:30.10:0,30,528
chr10	3317598	.	AGT	A	1003.05	PASS	AB=0.960;AC=14;AF=0.259;AN=54;BaseQRankSum=5.547;DP=767;FS=9.503;HRun=0;HaplotypeScore=161.5381;InbreedingCoeff=-0.1563;MQ=52.31;MQ0=18;MQRankSum=-3.876;QD=2.59;ReadPosRankSum=-0.764;VQSLOD=1.6986;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:39,0:37:4.01:4,0,18	0/1:13,2:15:11.07:11,0,300	./.	0/0:37,0:7:5.97:0,6,64	0/0:19,0:19:6.99:0,7,547	0/0:8,0:21:10.86:0,11,218	0/0:15,0:37:31.11:0,31,284	1/1:23,22:44:66:705,66,0	0/0:21,0:21:29.18:0,29,613	0/0:25,1:25:12.97:0,13,619	0/0:8,0:8:17.06:0,17,204	0/1:31,0:31:71.20:71,0,761	0/1:15,2:16:33.95:34,0,360	0/0:37,2:40:46.09:0,46,1122	0/1:34,0:34:13.29:60,0,13	0/0:22,1:23:19.01:0,19,715	0/1:28,0:27:50.46:50,0,54	0/1:16,0:16:25.38:52,0,25	0/1:22,0:16:19.61:20,0,146	0/1:20,1:22:31.25:31,0,409	0/1:78,4:78:56.37:56,0,1559	0/0:30,1:31:62.24:0,62,924	0/0:21,1:22:27.06:0,27,539	0/0:25,1:26:24.16:0,24,763	0/1:13,0:13:17.36:17,0,20	0/1:17,2:19:45.33:45,0,428	0/0:16,0:16:20.40:0,20,499	0/0:10,0:10:12.51:0,13,189
chr10	3317679	.	ATG	A	1525.37	PASS	AB=0.951;AC=19;AF=0.339;AN=56;BaseQRankSum=0.646;DP=915;FS=2.578;HRun=0;HaplotypeScore=195.6646;InbreedingCoeff=0.1403;MQ=53.50;MQ0=15;MQRankSum=2.242;QD=3.71;ReadPosRankSum=0.165;VQSLOD=2.8997;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:37:41.46:0,41,336	0/0:9,0:9:9.50:0,10,142	1/1:43,0:18:0.25:1,0,0	0/0:37,0:18:3.62:0,4,59	0/1:19,2:21:31.02:31,0,462	0/1:20,1:21:33.39:33,0,394	0/1:31,2:33:32.43:32,0,859	1/1:17,0:35:3.05:56,3,0	0/1:23,1:24:50.28:50,0,605	0/0:27,0:28:9.44:0,9,534	0/0:15,2:17:0.77:0,1,478	0/0:34,2:36:20.32:0,20,1075	0/1:33,1:33:36.89:37,0,860	0/1:28,0:28:14.82:15,0,705	0/0:54,0:68:99:0,135,1228	0/0:29,1:30:22.52:0,23,787	0/0:56,0:56:99:0,107,1011	0/0:53,1:53:63.75:0,64,1033	0/1:19,2:19:46.38:46,0,179	0/1:27,1:28:36.04:36,0,716	0/1:62,4:63:94.04:94,0,1169	0/0:33,1:35:28.87:0,29,954	0/0:19,0:19:41.73:0,42,613	0/0:32,2:34:43.27:0,43,1104	0/0:31,0:40:89.45:0,89,813	1/1:6,22:28:25.16:718,25,0	1/1:12,10:22:41.53:448,42,0	1/1:1,3:6:11.70:98,12,0
chr10	3317699	.	G	GTA	4861.46	PASS	AB=0.760;AC=6;AF=0.107;AN=56;BaseQRankSum=0.039;DP=1019;FS=13.097;HRun=0;HaplotypeScore=188.0929;InbreedingCoeff=0.2450;MQ=51.47;MQ0=29;MQRankSum=-2.463;QD=16.20;ReadPosRankSum=6.367;VQSLOD=3.6992;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,29:42:44.91:849,45,0	0/0:8,0:8:14.81:0,15,185	0/0:51,0:8:11.89:0,12,103	0/0:48,0:11:20.91:0,21,220	0/0:28,0:28:73.89:0,74,793	0/0:19,0:19:54:0,54,625	0/0:36,0:36:96.12:0,96,1209	0/0:33,0:31:79.38:0,79,590	0/0:31,0:30:83.81:0,84,964	0/0:31,0:31:62.69:0,63,956	0/0:22,0:21:60.06:0,60,717	0/0:39,0:39:99:0,117,1427	0/0:37,0:37:99:0,105,1211	0/0:31,0:31:81.08:0,81,983	0/1:61,20:79:99:1451,0,229	0/0:27,0:27:78.12:0,78,958	0/1:46,19:63:99:1218,0,111	0/1:37,26:64:99:418,0,898	0/0:17,0:14:32.56:0,33,344	0/0:27,0:27:74.64:0,75,951	0/0:73,0:68:99:0,167,1860	0/0:38,0:38:99:0,104,1260	0/0:22,0:22:63.07:0,63,786	0/0:40,0:40:99:0,114,1381	0/1:32,13:44:99:925,0,144	0/0:29,0:29:86.50:0,86,674	0/0:24,0:23:71.72:0,72,555	0/0:8,0:8:20.87:0,21,154
chr10	3318377	.	AAATGGAG	A	1821.74	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.932;DP=627;FS=9.988;HRun=0;HaplotypeScore=140.8400;InbreedingCoeff=0.9991;MQ=83.68;MQ0=0;MQRankSum=-8.364;QD=41.40;ReadPosRankSum=-0.308;VQSLOD=2.9755;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,37:44:75.21:1917,75,0	0/0:11,0:11:33.11:0,33,1328	0/0:24,0:24:63.65:0,64,1915	0/0:16,0:16:42.11:0,42,1439	0/0:26,0:26:78.26:0,78,2868	0/0:17,0:16:48.04:0,48,1807	0/0:23,0:23:69.23:0,69,2375	0/0:29,0:29:84.29:0,84,3180	0/0:23,0:23:69.24:0,69,2720	0/0:33,0:33:96.33:0,96,3793	0/0:22,0:22:66.23:0,66,2677	0/0:23,0:23:69.24:0,69,2629	0/0:18,0:18:54.19:0,54,2038	0/0:18,0:18:51.17:0,51,1912	0/0:23,0:23:69.24:0,69,2661	0/0:26,0:26:75.26:0,75,3006	0/0:18,0:18:54.19:0,54,2127	0/0:19,0:19:54.19:0,54,2183	0/0:21,0:21:60.20:0,60,2316	0/0:24,0:24:72.25:0,72,2760	0/0:30,0:30:90.31:0,90,3633	0/0:21,0:21:63.22:0,63,2500	0/0:16,0:16:48.16:0,48,1946	0/0:21,0:21:60.19:0,60,2353	0/0:13,0:13:36.08:0,36,1290	0/0:23,0:23:69.24:0,69,2827	0/0:35,0:35:99:0,102,4013	0/0:10,0:10:30.10:0,30,1229
chr10	3318752	.	GA	G	1994.56	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=10.489;DP=579;FS=18.829;HRun=3;HaplotypeScore=65.9861;InbreedingCoeff=0.9903;MQ=85.41;MQ0=0;MQRankSum=-2.419;QD=31.16;ReadPosRankSum=1.988;VQSLOD=1.9279;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:81.23:0,81,1143	0/0:7,0:7:21.07:0,21,299	0/0:31,0:30:69.02:0,69,925	0/0:20,0:18:36.54:0,37,457	0/0:24,0:24:69.23:0,69,993	0/0:26,0:26:78.25:0,78,1105	0/0:20,0:20:60.17:0,60,827	0/0:23,0:23:63.19:0,63,862	0/0:16,1:17:13.98:0,14,650	0/0:26,0:26:78.26:0,78,1120	0/0:20,0:20:60.20:0,60,864	0/0:27,0:27:78.23:0,78,1083	0/0:19,0:19:57.18:0,57,800	0/0:31,0:31:87.28:0,87,1212	1/1:1,10:11:27.08:335,27,0	0/0:13,0:13:39.13:0,39,560	1/1:0,34:34:99:1262,102,0	1/1:2,6:8:18.06:223,18,0	0/0:23,0:23:63.20:0,63,868	0/0:24,0:24:72.24:0,72,1029	0/0:13,0:13:39.13:0,39,562	0/0:19,0:19:54.17:0,54,761	0/0:17,0:17:51.17:0,51,733	0/0:26,0:26:75.25:0,75,1079	1/1:0,11:11:27.07:334,27,0	0/0:26,0:26:78.25:0,78,1103	0/0:23,0:22:66.22:0,66,950	0/0:10,0:10:30.10:0,30,432
chr10	3319364	.	CAG	C	800.39	PASS	AB=1.000;AC=4;AF=0.071;AN=56;BaseQRankSum=8.081;DP=929;FS=5.385;HRun=0;HaplotypeScore=154.4049;InbreedingCoeff=0.4669;MQ=74.49;MQ0=5;MQRankSum=0.923;QD=10.96;ReadPosRankSum=0.939;VQSLOD=3.2708;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,24:30:65.89:876,66,0	0/0:10,0:10:27.09:0,27,479	0/0:74,0:49:86.10:0,86,1511	0/0:91,0:63:96.98:0,97,1351	0/0:28,0:28:78.27:0,78,1363	0/0:21,0:20:57.20:0,57,1005	0/0:29,0:29:81.22:0,81,1307	0/0:43,0:44:99:0,114,1851	0/0:32,0:32:81.26:0,81,1371	0/0:37,0:37:99:0,105,1754	0/0:27,0:27:81.28:0,81,1408	0/0:29,0:29:78.22:0,78,1286	0/0:41,0:41:99:0,111,1946	0/0:27,0:27:78.27:0,78,1378	0/0:40,0:40:50.49:0,50,277	0/0:25,0:25:69.22:0,69,1185	0/1:23,0:23:24.62:25,0,74	0/1:20,0:20:14.05:14,0,92	0/0:15,0:15:39.13:0,39,650	0/0:33,0:33:87.28:0,87,1482	0/0:51,0:51:99:0,135,2342	0/0:28,0:28:84.27:0,84,1446	0/0:27,0:27:78.27:0,78,1343	0/0:36,0:36:96.31:0,96,1659	0/0:23,0:23:26.80:0,27,151	0/0:36,0:36:99:0,102,1756	0/0:38,0:38:99:0,111,1945	0/0:13,0:13:39.13:0,39,692
chr10	3319366	.	G	GAGAC	2902.76	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=9.340;DP=920;FS=1.165;HRun=0;HaplotypeScore=179.2523;InbreedingCoeff=0.9978;MQ=73.79;MQ0=5;MQRankSum=-6.399;QD=27.13;ReadPosRankSum=1.083;VQSLOD=3.1156;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:26.70:0,27,379	0/0:9,0:9:27.09:0,27,513	0/0:72,0:47:37.67:0,38,1477	0/0:89,0:62:71.06:0,71,1426	0/0:26,0:26:78.27:0,78,1456	0/0:21,0:20:57.20:0,57,1066	0/0:28,0:28:81.22:0,81,1365	0/0:41,0:41:99:0,114,1931	0/0:33,0:33:84.26:0,84,1471	0/0:36,0:36:99:0,105,1869	0/0:28,0:28:81.28:0,81,1487	0/0:29,0:29:81.22:0,81,1382	0/0:40,0:40:99:0,114,2082	0/0:27,0:27:78.27:0,78,1469	1/1:2,38:40:41.88:1061,42,0	0/0:26,0:26:72.22:0,72,1268	1/1:3,20:23:27.05:692,27,0	1/1:4,18:22:30.45:745,30,0	0/0:15,0:15:39.13:0,39,676	0/0:31,0:31:87.28:0,87,1570	0/0:51,0:51:99:0,135,2499	0/0:28,0:28:84.27:0,84,1542	0/0:26,0:26:78.27:0,78,1419	0/0:36,0:36:96.78:0,97,1772	1/1:2,20:22:21.07:564,21,0	0/0:36,0:36:99:0,102,1850	0/0:38,0:38:99:0,111,2084	0/0:15,0:15:45.12:0,45,784
chr10	3319784	.	TGTGGGAAAAGCCCCAGATC	T	6537.48	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=10.865;DP=771;FS=6.879;HRun=0;HaplotypeScore=377.0143;InbreedingCoeff=0.9987;MQ=87.97;MQ0=0;MQRankSum=-10.461;QD=89.55;ReadPosRankSum=1.504;VQSLOD=3.7351;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:61,0:61:99:0,178,14566	0/0:11,0:11:33.11:0,33,2910	0/0:25,0:25:68.92:0,69,4004	0/0:31,0:31:78.27:0,78,5387	0/0:23,0:23:66.23:0,66,5447	0/0:27,0:27:81.28:0,81,6934	0/0:45,0:45:99:0,132,10061	0/0:40,0:40:99:0,111,8364	0/0:19,0:19:54.19:0,54,4355	0/0:29,0:29:78.27:0,78,6670	0/0:15,0:15:45.15:0,45,3621	0/0:34,0:34:96.33:0,96,7760	0/0:37,0:37:99:0,99,8363	0/0:37,0:37:99:0,111,8333	1/1:5,21:26:48.63:2530,49,0	0/0:27,0:27:75.26:0,75,6027	1/1:2,12:14:27.09:1358,27,0	1/1:7,8:15:24.08:1280,24,0	0/0:21,0:21:60.19:0,60,3976	0/0:25,0:25:69.24:0,69,5556	0/0:44,0:44:99:0,129,10436	0/0:28,0:28:78.23:0,78,6140	0/0:23,0:23:69.24:0,69,5647	0/0:35,0:35:96.32:0,96,7340	1/1:4,14:18:27.09:1368,27,0	0/0:29,0:29:84.28:0,84,6303	0/0:21,0:21:54.19:0,54,4516	0/0:11,0:11:33.11:0,33,2750
chr10	3319996	.	A	AT	2105.82	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=14.724;DP=625;FS=4.352;HRun=0;HaplotypeScore=77.0126;InbreedingCoeff=0.8913;MQ=67.90;MQ0=0;MQRankSum=-3.429;QD=19.68;ReadPosRankSum=-0.343;VQSLOD=5.4492;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:20,15:35:90.14:763,90,0	0/0:11,0:11:33.09:0,33,443	0/0:4,0:4:5.22:0,5,34	0/1:9,0:9:4.05:4,0,108	0/0:27,0:27:81.21:0,81,1064	0/0:28,0:28:84.28:0,84,1174	0/0:21,0:21:63.20:0,63,863	0/0:34,0:34:99:0,99,1363	0/0:29,0:29:87.28:0,87,1198	0/0:21,0:21:63.21:0,63,877	0/0:27,0:27:78.23:0,78,1042	0/0:27,0:27:81.27:0,81,1128	0/0:29,0:29:87.25:0,87,1167	0/0:32,0:32:96.30:0,96,1320	1/1:9,5:14:40.37:351,40,0	0/0:30,0:30:90.28:0,90,1225	1/1:14,4:18:44.32:397,44,0	1/1:7,1:8:24:242,24,0	0/0:18,0:18:54.17:0,54,739	0/0:36,0:36:99:0,108,1476	0/0:14,0:14:42.11:0,42,550	0/0:18,0:18:54.17:0,54,735	0/0:22,0:22:66.22:0,66,922	0/0:27,0:27:81.25:0,81,1113	1/1:12,11:23:66.33:525,66,0	0/0:20,0:20:60.20:0,60,839	0/0:35,0:33:99:0,99,1363	0/0:8,0:8:24.08:0,24,336
chr10	3319998	.	CA	C	1651.30	PASS	AB=1.000;AC=12;AF=0.214;AN=56;BaseQRankSum=15.076;DP=633;FS=10.179;HRun=1;HaplotypeScore=78.9710;InbreedingCoeff=0.7890;MQ=67.78;MQ0=0;MQRankSum=-2.544;QD=14.61;ReadPosRankSum=-0.721;VQSLOD=1.9893;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:21,15:36:83.53:583,84,0	0/0:13,0:13:39.12:0,39,594	0/1:4,0:4:17.63:18,0,87	0/1:9,0:9:22.98:23,0,117	0/0:26,0:26:78.24:0,78,1194	0/0:28,0:28:84.27:0,84,1318	0/0:19,0:19:57.19:0,57,911	0/0:36,0:36:99:0,105,1614	0/0:30,0:30:90.27:0,90,1379	0/0:23,0:23:69.18:0,69,1020	0/0:27,0:27:81.28:0,81,1292	0/0:27,0:27:81.28:0,81,1285	0/0:29,0:29:87.30:0,87,1390	0/0:32,0:32:96.30:0,96,1479	1/1:9,4:14:35.39:249,35,0	0/0:30,0:30:90.29:0,90,1408	1/1:15,4:19:45.27:397,45,0	1/1:7,1:8:23.77:194,24,0	0/0:17,0:17:51.16:0,51,774	0/0:36,0:36:99:0,108,1678	0/0:14,0:14:42.14:0,42,665	0/0:16,0:16:45.09:0,45,689	0/0:24,0:24:72.25:0,72,1146	0/0:27,0:27:81.20:0,81,1192	1/1:12,11:23:57.97:370,58,0	0/0:21,0:21:63.20:0,63,964	0/0:37,0:35:99:0,111,1679	0/0:8,0:8:24.08:0,24,383
chr10	3320768	.	AGTAG	A	3833.83	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=11.720;DP=472;FS=10.618;HRun=0;HaplotypeScore=77.6635;InbreedingCoeff=0.9974;MQ=77.74;MQ0=0;MQRankSum=-5.819;QD=49.15;ReadPosRankSum=3.237;VQSLOD=4.2441;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,23:24:60.21:1163,60,0	0/0:9,0:9:27.09:0,27,740	0/0:17,0:16:48.16:0,48,1246	0/0:16,0:16:47.75:0,48,1085	0/0:25,0:25:72.25:0,72,1966	0/0:25,0:25:69.24:0,69,1891	0/0:21,0:21:63.20:0,63,1666	0/0:24,0:24:69.24:0,69,1837	0/0:14,0:14:42.14:0,42,1150	0/0:23,0:23:69.20:0,69,1818	0/0:13,0:13:39.11:0,39,954	0/0:11,0:11:33.11:0,33,847	0/0:13,0:13:39.13:0,39,1029	0/0:13,0:13:39.13:0,39,1065	1/1:0,15:15:39.13:752,39,0	0/0:14,0:14:42.14:0,42,1150	1/1:1,19:20:48.16:930,48,0	1/1:0,11:11:30.10:581,30,0	0/0:13,0:13:33.11:0,33,885	0/0:21,0:21:57.20:0,57,1560	0/0:22,0:22:63.22:0,63,1725	0/0:19,0:19:54.19:0,54,1459	0/0:19,0:19:57.20:0,57,1561	0/0:11,0:11:30.10:0,30,800	1/1:1,7:8:21.07:407,21,0	0/0:19,0:19:54.19:0,54,1480	0/0:24,0:23:69.24:0,69,1886	0/0:8,0:8:21.07:0,21,575
chr10	3320878	.	T	TA	479.47	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.908;DP=554;FS=4.507;HRun=8;HaplotypeScore=62.9476;InbreedingCoeff=0.9722;MQ=78.24;MQ0=0;MQRankSum=-1.147;QD=21.79;ReadPosRankSum=0.342;VQSLOD=4.1457;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,17:22:30.27:574,30,0	0/0:8,0:8:18:0,18,165	0/0:21,0:21:32.97:0,33,291	0/0:14,0:14:14.99:0,15,191	0/0:22,0:22:51:0,51,461	0/0:26,0:26:66.02:0,66,604	0/0:21,0:21:47.99:0,48,433	0/0:31,0:31:84.03:0,84,765	0/0:25,0:25:69.03:0,69,630	0/0:28,0:28:72.03:0,72,656	0/0:21,0:21:57.03:0,57,521	0/0:19,0:19:51.02:0,51,466	0/0:25,0:25:63.01:0,63,571	0/0:24,0:24:63.01:0,63,576	0/0:26,0:26:69.03:0,69,631	0/0:15,0:15:39.01:0,39,357	0/0:26,0:26:75.02:0,75,680	0/0:17,0:17:39:0,39,357	0/0:13,0:13:32.81:0,33,288	0/0:16,0:16:42.01:0,42,380	0/0:17,0:17:48.03:0,48,439	0/0:10,0:10:23.99:0,24,215	0/0:12,0:12:26.90:0,27,247	0/0:17,0:17:42.01:0,42,384	0/0:15,0:15:42.01:0,42,380	0/0:17,0:17:51.02:0,51,463	0/0:33,0:33:90.03:0,90,819	0/0:13,0:13:36.02:0,36,329
chr10	3321615	.	TA	T	2106.37	PASS	AB=0.900;AC=11;AF=0.196;AN=56;BaseQRankSum=11.918;DP=423;FS=3.416;HRun=9;HaplotypeScore=45.6866;InbreedingCoeff=0.8852;MQ=71.86;MQ0=0;MQRankSum=1.555;QD=20.25;ReadPosRankSum=1.386;VQSLOD=3.9583;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,26:28:69.02:631,69,0	0/0:7,0:7:15.04:0,15,173	0/0:9,0:8:15.02:0,15,153	0/0:8,0:8:10.57:0,11,131	0/0:19,0:19:54.12:0,54,594	0/0:18,0:18:51.15:0,51,589	0/0:8,0:8:21.94:0,22,235	0/0:30,1:31:81.23:0,81,927	0/1:8,1:9:6.40:6,0,187	0/0:10,0:10:27.08:0,27,312	0/0:16,0:16:45.13:0,45,519	0/0:12,0:12:27.08:0,27,312	0/0:11,0:11:30.09:0,30,346	0/0:21,0:21:60.18:0,60,693	1/1:2,15:17:42.02:383,42,0	0/0:13,0:13:39.12:0,39,450	1/1:1,19:20:57.03:522,57,0	1/1:1,18:19:54.03:494,54,0	0/0:16,1:17:14.65:0,15,423	0/0:22,0:22:57.15:0,57,648	0/0:10,0:10:21.06:0,21,242	0/0:9,0:9:24.07:0,24,277	0/0:10,0:10:30.09:0,30,346	0/0:10,0:10:29.98:0,30,327	1/1:0,11:11:27.01:247,27,0	0/0:18,0:18:45.13:0,45,512	0/0:24,0:24:66.18:0,66,751	0/0:16,0:16:48.14:0,48,552
chr10	3323483	.	A	AT	2606.64	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=6.477;DP=624;FS=8.295;HRun=8;HaplotypeScore=65.7284;InbreedingCoeff=0.9783;MQ=78.97;MQ0=0;MQRankSum=-1.068;QD=26.60;ReadPosRankSum=0.680;VQSLOD=4.2441;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,24:25:63.19:727,63,0	0/0:3,0:3:9:0,9,82	0/0:15,0:15:14.60:0,15,231	0/0:13,0:14:25.22:0,25,215	0/0:31,0:31:93.03:0,93,846	0/0:36,0:36:99:0,108,988	0/0:17,0:17:41.99:0,42,379	0/0:38,0:38:99:0,99,898	0/0:24,0:24:63.03:0,63,576	0/0:26,0:26:78.03:0,78,709	0/0:20,0:20:57.03:0,57,522	0/0:19,0:20:56.03:0,56,493	0/0:23,0:23:63.03:0,63,577	0/0:22,0:22:53.99:0,54,484	1/1:3,26:29:78.23:895,78,0	0/0:26,0:26:63.02:0,63,577	0/0:14,0:14:32.93:0,33,292	1/1:7,20:27:54.12:608,54,0	0/0:19,0:19:45.01:0,45,412	0/0:37,0:37:99:0,111,1011	0/0:21,0:21:51.02:0,51,467	0/0:23,0:23:66.04:0,66,604	0/0:13,0:13:26.98:0,27,239	0/0:22,0:22:60.03:0,60,549	1/1:1,16:17:48.08:537,48,0	0/0:23,0:23:63.03:0,63,577	0/0:26,0:26:78.03:0,78,709	0/0:13,0:13:36.02:0,36,329
chr10	3323713	.	A	AG	1253.82	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-5.711;DP=557;FS=1.319;HRun=6;HaplotypeScore=63.6888;InbreedingCoeff=0.9889;MQ=82.66;MQ0=0;MQRankSum=-1.357;QD=27.86;ReadPosRankSum=1.481;VQSLOD=4.3041;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:87.78:0,88,1077	0/0:5,0:5:15:0,15,144	0/0:27,0:27:43.27:0,43,598	0/0:21,0:21:34.26:0,34,363	0/0:21,0:21:57.12:0,57,581	0/0:27,0:27:78.17:0,78,792	0/0:32,0:32:84.16:0,84,848	0/0:11,0:11:21.04:0,21,214	0/0:19,0:19:54.12:0,54,550	0/0:22,0:22:57.13:0,57,581	0/0:16,0:16:33.07:0,33,336	0/0:16,0:16:42.09:0,42,427	0/0:26,0:26:75.17:0,75,764	0/0:18,0:18:48.08:0,48,479	1/1:1,21:22:51.16:642,51,0	0/0:16,0:16:45.05:0,45,437	0/0:20,0:20:43.91:0,44,434	1/1:3,8:11:24.04:302,24,0	0/0:15,0:15:36.07:0,36,367	0/0:18,0:18:48.11:0,48,489	0/0:31,0:31:87.19:0,87,886	0/0:25,0:25:72.15:0,72,729	0/0:13,0:13:36.08:0,36,367	0/0:28,0:28:78.09:0,78,774	1/1:0,12:12:36.12:453,36,0	0/0:16,0:16:39.08:0,39,398	0/0:21,0:21:57.13:0,57,581	0/0:7,0:7:18.02:0,18,176
chr10	3323795	.	A	AG	359.96	PASS	AB=0.717;AC=6;AF=0.107;AN=56;BaseQRankSum=6.069;DP=451;FS=3.833;HRun=4;HaplotypeScore=57.0524;InbreedingCoeff=0.5504;MQ=65.70;MQ0=3;MQRankSum=-5.246;QD=10.91;ReadPosRankSum=-0.654;VQSLOD=0.7819;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,111,1257	0/0:5,0:5:12.03:0,12,135	0/0:30,0:15:31.17:0,31,333	0/0:31,0:19:41.77:0,42,425	0/0:18,0:18:51.14:0,51,579	0/0:19,0:19:45.13:0,45,510	0/0:22,0:22:63.12:0,63,715	0/0:15,0:15:42.09:0,42,457	0/0:12,0:12:27.07:0,27,306	0/0:12,0:11:27.08:0,27,306	0/0:5,0:5:12.03:0,12,136	0/0:15,0:15:39.11:0,39,442	0/0:18,0:18:42.12:0,42,475	0/0:16,0:16:33.09:0,33,374	1/1:1,4:5:9.03:121,9,0	0/0:21,0:21:60.17:0,60,680	0/1:7,6:12:81.01:174,0,81	1/1:4,2:5:9.03:118,9,0	0/0:12,0:11:27.08:0,27,306	0/0:7,0:7:18.03:0,18,194	0/0:38,0:38:87.23:0,87,980	0/0:19,0:19:42.12:0,42,476	0/0:6,0:6:18.05:0,18,204	0/0:20,0:20:60.13:0,60,665	0/1:6,3:6:24.54:72,0,25	0/0:16,0:16:45.13:0,45,510	0/0:10,0:10:27.08:0,27,306	0/0:6,0:6:18.05:0,18,204
chr10	3323832	.	A	AG	460.10	PASS	AB=0.731;AC=4;AF=0.071;AN=56;BaseQRankSum=7.285;DP=494;FS=4.311;HRun=4;HaplotypeScore=68.7777;InbreedingCoeff=-0.0768;MQ=60.47;MQ0=3;MQRankSum=-6.392;QD=11.50;ReadPosRankSum=-2.570;VQSLOD=0.7499;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,120,1359	0/0:8,0:8:21.06:0,21,238	0/0:24,0:11:12.03:0,12,211	0/0:31,0:15:38.89:0,39,384	0/0:24,0:23:63.18:0,63,711	0/0:21,0:21:63.18:0,63,714	0/0:21,0:21:48.13:0,48,543	0/0:34,0:32:61.98:0,62,683	0/0:11,0:11:33.09:0,33,374	0/0:20,0:20:57.16:0,57,646	0/0:9,0:9:18.05:0,18,201	0/0:18,0:18:45.11:0,45,498	0/0:14,0:14:36.10:0,36,408	0/0:18,0:18:51.14:0,51,577	0/1:6,6:12:69:254,0,69	0/0:17,0:17:51.15:0,51,578	0/1:13,3:15:99:118,0,108	0/1:3,3:6:83.98:103,0,84	0/0:16,0:15:39.11:0,39,442	0/0:14,0:14:24.06:0,24,268	0/0:28,2:30:72.19:0,72,806	0/0:16,0:16:48.14:0,48,544	0/0:12,0:11:30.09:0,30,340	0/0:15,0:15:36.10:0,36,408	0/1:4,2:6:21.95:95,0,22	0/0:17,0:17:45.13:0,45,510	0/0:16,0:16:45.13:0,45,510	0/0:6,0:6:12.03:0,12,136
chr10	3323837	.	TCCAGCAGGAGAGAGGGGGA	T	2356.52	PASS	AB=0.884;AC=8;AF=0.143;AN=56;BaseQRankSum=7.593;DP=496;FS=0.000;HRun=0;HaplotypeScore=231.6326;InbreedingCoeff=0.6771;MQ=60.51;MQ0=3;MQRankSum=-6.006;QD=32.28;ReadPosRankSum=-3.075;VQSLOD=1.5442;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,105,5810	0/0:8,0:8:21.07:0,21,1125	0/0:26,0:12:21.07:0,21,638	0/0:32,0:16:29.91:0,30,916	0/0:25,0:24:57.18:0,57,2915	0/0:21,0:21:57.20:0,57,3421	0/0:20,0:20:51.18:0,51,2434	0/1:23,10:31:99:585,0,551	0/0:11,0:11:33.11:0,33,2159	0/0:21,0:21:57.20:0,57,3079	0/0:8,0:8:18.06:0,18,864	0/0:17,0:17:48.16:0,48,2582	0/0:15,0:15:30.10:0,30,1730	0/0:17,0:17:51.18:0,51,3300	1/1:13,0:13:30.10:755,30,0	0/0:18,0:18:51.18:0,51,3360	0/1:15,0:14:36.36:510,0,36	1/1:6,0:6:9.03:227,9,0	0/0:15,0:14:30.10:0,30,1432	0/0:14,0:14:39.08:0,39,1770	0/0:29,0:29:81.28:0,81,4716	0/0:16,0:16:39.13:0,39,2543	0/0:14,0:13:33:0,33,1537	0/0:12,0:12:36.12:0,36,2338	1/1:6,0:6:15.05:428,15,0	0/0:17,0:16:42.14:0,42,2290	0/0:16,0:16:45.15:0,45,3216	0/0:6,0:6:18.06:0,18,701
chr10	3323850	.	AG	A	1095.32	PASS	AB=0.780;AC=8;AF=0.143;AN=56;BaseQRankSum=9.871;DP=519;FS=1.288;HRun=5;HaplotypeScore=68.5779;InbreedingCoeff=0.6905;MQ=67.95;MQ0=2;MQRankSum=-6.153;QD=19.91;ReadPosRankSum=-0.585;VQSLOD=2.9890;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,114,1525	0/0:9,0:9:24.08:0,24,318	0/0:32,0:20:54.17:0,54,697	0/0:33,0:22:60.19:0,60,788	0/0:26,0:25:60.20:0,60,814	0/0:22,0:22:63.19:0,63,841	0/0:23,0:23:69.21:0,69,917	0/1:17,0:16:99:219,0,149	0/0:14,0:14:42.14:0,42,565	0/0:23,0:23:66.22:0,66,897	0/0:10,0:10:24.04:0,24,305	0/0:20,0:20:60.15:0,60,765	0/0:13,0:13:36.12:0,36,484	0/0:22,0:22:66.21:0,66,882	1/1:0,12:12:36.10:400,36,0	0/0:18,0:18:54.16:0,54,721	0/1:3,11:13:56.93:295,0,57	1/1:0,5:4:12.03:133,12,0	0/0:17,0:17:45.15:0,45,609	0/0:20,0:20:48.16:0,48,651	0/0:38,0:38:99:0,102,1445	0/0:17,0:17:45.15:0,45,612	0/0:15,0:14:30.10:0,30,410	0/0:13,0:13:36.12:0,36,490	1/1:0,7:7:18.05:200,18,0	0/0:17,0:16:48.13:0,48,636	0/0:16,0:16:48.16:0,48,657	0/0:6,0:6:15.04:0,15,189
chr10	3326382	.	C	CA	1627.03	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-9.292;DP=839;FS=0.592;HRun=3;HaplotypeScore=87.3831;InbreedingCoeff=0.9994;MQ=84.70;MQ0=0;MQRankSum=-2.886;QD=36.16;ReadPosRankSum=1.128;VQSLOD=3.9799;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,44:45:99:1722,123,0	0/0:20,0:20:51.16:0,51,611	0/0:30,0:30:78.20:0,78,901	0/0:24,0:23:64.88:0,65,720	0/0:31,0:31:72.22:0,72,861	0/0:31,0:31:90.26:0,90,1068	0/0:30,0:30:84.26:0,84,1006	0/0:34,0:34:99:0,102,1213	0/0:44,0:44:99:0,126,1511	0/0:33,0:33:93.28:0,93,1115	0/0:15,0:15:45.14:0,45,538	0/0:33,0:33:96.29:0,96,1152	0/0:30,0:30:87.21:0,87,1014	0/0:40,0:40:99:0,105,1247	0/0:28,0:28:78.24:0,78,936	0/0:28,0:28:81.25:0,81,972	0/0:47,0:47:99:0,129,1530	0/0:17,0:17:51.14:0,51,597	0/0:25,0:25:69.21:0,69,827	0/0:30,0:30:87.27:0,87,1043	0/0:38,0:38:99:0,111,1294	0/0:33,0:33:87.27:0,87,1042	0/0:17,0:17:42.13:0,42,503	0/0:45,0:44:99:0,123,1476	0/0:25,0:25:66.19:0,66,781	0/0:29,0:29:84.24:0,84,996	0/0:27,0:27:72.19:0,72,849	0/0:10,0:10:30.09:0,30,360
chr10	3327163	.	AC	A	4494.74	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=15.930;DP=657;FS=5.101;HRun=2;HaplotypeScore=85.2766;InbreedingCoeff=0.9864;MQ=82.10;MQ0=0;MQRankSum=-3.795;QD=33.05;ReadPosRankSum=4.202;VQSLOD=4.9307;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,37:38:99:1265,102,0	0/0:11,0:11:33.02:0,33,428	0/0:15,0:15:29.35:0,29,458	0/0:21,0:21:52.67:0,53,661	0/0:26,0:26:78.25:0,78,1145	0/0:14,0:14:42.13:0,42,608	0/0:20,0:20:60.18:0,60,861	0/0:31,0:31:93.27:0,93,1330	0/0:23,0:23:69.23:0,69,1032	0/0:22,0:22:63.21:0,63,942	0/0:15,0:15:42.14:0,42,629	0/0:25,0:25:75.25:0,75,1123	0/0:36,0:36:99:0,108,1566	0/0:28,0:28:84.28:0,84,1240	1/1:0,29:29:81.26:1051,81,0	0/0:26,0:26:78.26:0,78,1149	1/1:0,22:22:51.17:661,51,0	1/1:0,22:22:57.19:739,57,0	0/0:18,0:18:48.15:0,48,700	0/0:27,0:27:81.26:0,81,1194	0/0:24,0:24:72.22:0,72,1037	0/0:28,0:28:80.30:0,80,1173	0/0:27,0:27:81.19:0,81,1161	0/0:17,0:17:48.16:0,48,717	1/1:0,25:25:60.19:778,60,0	0/0:34,0:34:99:0,102,1450	0/0:30,0:30:87.28:0,87,1283	0/0:3,0:3:9.03:0,9,135
chr10	3327900	.	AT	A	1285.91	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.959;DP=696;FS=0.648;HRun=1;HaplotypeScore=71.6086;InbreedingCoeff=0.9689;MQ=89.32;MQ0=0;MQRankSum=-4.204;QD=31.36;ReadPosRankSum=1.424;VQSLOD=3.3733;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,41:41:99:1381,99,0	0/0:4,0:4:12.04:0,12,192	0/0:24,0:24:72.17:0,72,1008	0/0:30,0:30:77.38:0,77,1169	0/0:17,0:17:48.16:0,48,760	0/0:17,0:17:48.12:0,48,729	0/0:20,0:20:60.15:0,60,859	0/0:37,0:37:99:0,108,1590	0/0:28,0:28:84.26:0,84,1285	0/0:31,0:31:93.28:0,93,1419	0/0:10,0:10:30.10:0,30,475	0/0:37,0:37:99:0,111,1767	0/0:30,0:30:87.26:0,87,1332	0/0:26,0:26:78.25:0,78,1214	0/0:40,0:40:99:0,120,1860	0/0:19,0:19:54.14:0,54,791	0/0:41,0:41:99:0,123,1829	0/0:24,0:23:72.20:0,72,1067	0/0:21,0:21:63.19:0,63,959	0/0:28,0:28:84.27:0,84,1312	0/0:27,0:27:81.19:0,81,1216	0/0:15,0:15:45.14:0,45,693	0/0:19,0:19:54.08:0,54,826	0/0:21,0:21:63.16:0,63,933	0/0:22,0:22:66.21:0,66,1028	0/0:28,0:28:84.28:0,84,1310	0/0:30,0:30:90.31:0,90,1436	0/0:9,0:9:27.09:0,27,431
chr10	3330857	.	AGTGT	A	201.96	PASS	AB=1.000;AC=16;AF=0.308;AN=52;BaseQRankSum=3.203;DP=632;FS=11.420;HRun=0;HaplotypeScore=105.1055;InbreedingCoeff=0.2630;MQ=52.62;MQ0=52;MQRankSum=0.896;QD=0.94;ReadPosRankSum=0.656;VQSLOD=1.5075;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:24:2.99:38,3,0	0/0:5,0:5:8.98:0,9,129	./.	./.	0/0:21,0:19:23.06:0,23,253	1/1:6,9:14:3.01:47,3,0	1/1:28,0:24:5.83:81,6,0	0/0:30,0:24:2.55:0,3,19	0/0:27,0:24:24.46:0,24,375	0/0:21,0:20:20.36:0,20,281	0/0:15,0:12:9.03:0,9,160	0/0:25,0:25:27.39:0,27,396	0/1:26,0:25:4.58:5,0,547	0/0:29,0:27:30.85:0,31,438	1/1:18,0:21:2.97:46,3,0	0/1:20,0:18:12.38:12,0,355	0/1:27,0:26:20.09:20,0,53	0/1:13,0:13:30.82:31,0,42	0/1:13,0:9:8.49:8,0,49	0/0:21,0:17:13.59:0,14,202	0/0:47,0:41:25.34:0,25,307	0/0:22,0:21:26.66:0,27,351	0/1:14,0:13:19.63:20,0,336	0/0:34,0:33:40.24:0,40,534	1/1:8,0:8:2.89:45,3,0	0/0:26,0:23:34.85:0,35,488	0/0:27,0:25:42.07:0,42,692	0/0:12,0:9:15.05:0,15,196
chr10	3330921	.	TGTGTGA	T	712	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=7.386;DP=646;FS=0.000;HRun=0;HaplotypeScore=142.6328;InbreedingCoeff=0.9134;MQ=51.63;MQ0=52;MQRankSum=-3.862;QD=11.87;ReadPosRankSum=2.136;VQSLOD=2.9075;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:16:3.18:0,3,76	0/0:10,0:10:27.09:0,27,714	0/0:37,0:19:45.11:0,45,1099	0/0:64,0:29:68.51:0,69,1640	0/0:25,0:22:59.94:0,60,1681	0/0:18,0:17:36.12:0,36,1068	0/0:27,0:24:47.95:0,48,1449	0/0:37,0:30:90.26:0,90,2457	0/0:19,0:19:57.06:0,57,1677	0/0:27,0:26:75.17:0,75,2110	0/0:14,0:11:30.09:0,30,845	0/0:17,0:16:42.14:0,42,1285	0/0:20,0:20:49.34:0,49,1102	0/0:18,0:16:36.11:0,36,933	1/1:21,2:22:10.15:62,10,0	0/0:14,0:13:37.03:0,37,1079	1/1:5,10:15:27.08:564,27,0	1/1:6,1:6:12:149,12,0	0/0:20,0:17:48.16:0,48,1223	0/0:23,0:18:42.14:0,42,1189	0/0:30,0:24:63.22:0,63,1762	0/0:16,0:15:36.12:0,36,911	0/0:15,0:15:36.11:0,36,923	0/0:32,0:31:52.03:0,52,1904	1/1:11,4:15:8.69:85,9,0	0/0:33,0:28:73.83:0,74,1792	0/0:34,0:30:65.95:0,66,1830	0/0:17,0:15:39.13:0,39,1054
chr10	3330923	.	T	TGA	99.67	PASS	AB=1.000;AC=6;AF=0.107;AN=56;BaseQRankSum=5.855;DP=650;FS=0.000;HRun=0;HaplotypeScore=112.2493;InbreedingCoeff=0.5556;MQ=53.27;MQ0=49;MQRankSum=-1.607;QD=1.51;ReadPosRankSum=0.272;VQSLOD=1.8487;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:12,6:16:4.56:55,5,0	0/0:10,0:10:27.09:0,27,383	0/0:37,0:19:39.67:0,40,468	0/0:68,0:32:64.01:0,64,775	0/0:25,0:22:59.95:0,60,808	0/0:22,0:21:39.08:0,39,505	0/0:27,0:24:48.12:0,48,709	0/0:35,0:29:87.07:0,87,1081	0/0:18,0:18:54:0,54,735	0/0:26,0:25:71.37:0,71,984	0/0:14,0:11:27.09:0,27,391	0/0:17,0:16:40.87:0,41,529	0/0:20,0:20:42.22:0,42,602	0/0:17,0:16:33.01:0,33,420	1/1:25,0:24:11.97:96,12,0	0/0:13,0:12:35.91:0,36,508	0/0:15,0:15:3.33:0,3,41	0/1:6,0:6:12.23:31,0,12	0/0:20,0:17:50.97:0,51,657	0/0:23,0:18:41.80:0,42,571	0/0:31,0:25:65.91:0,66,901	0/0:17,0:16:36.01:0,36,455	0/0:14,0:14:33.08:0,33,438	0/0:32,0:31:60.95:0,61,882	0/1:16,0:16:8.03:40,0,8	0/0:31,0:29:71.12:0,71,828	0/0:35,0:31:74.43:0,74,928	0/0:17,0:15:36.56:0,37,490
chr10	3330969	.	CTATACTTT	C	4505.16	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=11.108;DP=539;FS=5.904;HRun=0;HaplotypeScore=148.0073;InbreedingCoeff=0.9914;MQ=87.23;MQ0=0;MQRankSum=-11.837;QD=53.00;ReadPosRankSum=-1.296;VQSLOD=3.7732;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,12:14:24.08:644,24,0	0/0:13,0:13:36.12:0,36,1412	0/0:21,0:21:57.20:0,57,2058	0/0:27,0:27:57.04:0,57,2006	0/0:23,0:23:57.20:0,57,2342	0/0:24,0:24:72.25:0,72,3019	0/0:17,0:17:36.12:0,36,1465	0/0:35,0:34:87.29:0,87,3338	0/0:16,0:16:45.15:0,45,1895	0/0:27,0:27:60.21:0,60,2433	0/0:14,0:14:36.12:0,36,1512	0/0:23,0:23:66.23:0,66,2786	0/0:20,0:20:54.19:0,54,2249	0/0:10,0:10:27.09:0,27,1138	1/1:4,16:20:42.14:1126,42,0	0/0:11,0:11:27.09:0,27,1134	1/1:7,12:19:30.10:805,30,0	1/1:2,4:6:12.04:322,12,0	0/0:13,0:13:30.10:0,30,1188	0/0:24,0:24:69.17:0,69,2581	0/0:19,0:19:45.15:0,45,1845	0/0:18,0:18:51.16:0,51,2063	0/0:12,0:12:30.08:0,30,1035	0/0:20,0:20:60.21:0,60,2508	1/1:3,23:26:60.21:1609,60,0	0/0:26,0:26:69.24:0,69,2903	0/0:21,0:20:63.22:0,63,2678	0/0:20,0:20:60.21:0,60,2486
chr10	3331783	.	TAGC	T	1805.53	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.151;DP=949;FS=3.129;HRun=0;HaplotypeScore=150.5314;InbreedingCoeff=1.0000;MQ=86.56;MQ0=0;MQRankSum=-3.426;QD=36.11;ReadPosRankSum=2.999;VQSLOD=4.7009;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,50:50:99:1900,102,0	0/0:16,0:16:48.16:0,48,1143	0/0:33,0:33:96.22:0,96,2052	0/0:31,0:31:83.91:0,84,1764	0/0:29,0:29:87.30:0,87,2144	0/0:32,0:32:93.32:0,93,2291	0/0:15,0:15:45.14:0,45,996	0/0:41,0:41:99:0,120,2820	0/0:27,0:27:75.26:0,75,1846	0/0:40,0:40:99:0,120,2897	0/0:35,0:35:99:0,105,2526	0/0:40,0:40:99:0,120,2916	0/0:30,0:30:90.30:0,90,2143	0/0:39,0:39:99:0,117,2860	0/0:44,0:44:99:0,132,3159	0/0:38,0:38:99:0,114,2668	0/0:42,0:42:99:0,126,2958	0/0:28,0:28:78.12:0,78,1692	0/0:29,0:29:84.29:0,84,1979	0/0:34,0:34:99:0,99,2435	0/0:59,0:59:99:0,178,4310	0/0:32,0:32:96.33:0,96,2362	0/0:36,0:36:99:0,105,2562	0/0:33,0:33:99:0,99,2408	0/0:24,0:24:69.24:0,69,1690	0/0:35,0:35:99:0,105,2575	0/0:35,0:35:99:0,105,2557	0/0:22,0:22:63.22:0,63,1529
chr10	3335242	.	A	AC	4772.57	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-12.861;DP=667;FS=5.153;HRun=4;HaplotypeScore=64.8169;InbreedingCoeff=0.9993;MQ=84.01;MQ0=0;MQRankSum=-5.233;QD=36.71;ReadPosRankSum=3.788;VQSLOD=5.0306;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,102,1156	0/0:10,0:10:30.09:0,30,340	0/0:27,0:27:78.15:0,78,822	0/0:27,0:27:66.10:0,66,678	0/0:29,0:29:75.20:0,75,841	0/0:23,0:23:66.17:0,66,739	0/0:23,0:23:66.17:0,66,738	0/0:38,0:38:99:0,102,1150	0/0:25,0:25:75.21:0,75,851	0/0:28,0:28:75.17:0,75,836	0/0:17,0:17:48.14:0,48,544	0/0:22,0:22:63.16:0,63,704	0/0:20,0:20:60.17:0,60,681	0/0:28,0:28:84.18:0,84,920	1/1:2,29:31:81.27:1108,81,0	0/0:26,0:26:78.22:0,78,885	0/0:29,0:29:81.20:0,81,905	1/1:2,17:19:48.16:657,48,0	0/0:21,0:21:62.90:0,63,680	0/0:23,0:23:63.18:0,63,712	0/0:20,0:20:54.12:0,54,591	0/0:16,0:16:48.11:0,48,524	0/0:21,0:21:54.14:0,54,604	0/0:25,0:25:69.20:0,69,783	1/1:0,17:17:51.17:697,51,0	1/1:2,18:20:23.12:670,23,0	1/1:0,32:32:87.29:1189,87,0	1/1:0,11:11:33.11:451,33,0
chr10	3335905	.	CCCGTTG	C	641.02	PASS	AB=1.000;AC=8;AF=0.143;AN=56;BaseQRankSum=7.361;DP=1037;FS=3.762;HRun=0;HaplotypeScore=255.3066;InbreedingCoeff=0.3657;MQ=65.30;MQ0=3;MQRankSum=-5.848;QD=5.83;ReadPosRankSum=0.437;VQSLOD=2.4932;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:56:99:0,146,2587	0/0:18,0:18:48.16:0,48,1552	0/0:29,0:23:56.51:0,57,1468	0/0:38,0:29:66.13:0,66,1777	0/0:16,0:16:42.13:0,42,1322	0/0:24,0:24:66.23:0,66,2167	0/0:63,0:63:99:0,181,6153	1/1:2,3:5:9.03:157,9,0	0/0:42,0:42:99:0,123,4164	0/0:29,0:29:72.59:0,73,2461	0/0:15,0:15:42.14:0,42,1313	0/0:69,0:69:99:0,184,6078	0/0:63,2:65:84.36:0,84,4900	0/0:59,0:59:99:0,166,5461	0/0:67,0:67:6.48:0,6,2641	0/0:38,0:37:99:0,111,3771	1/1:5,15:19:12.04:205,12,0	0/1:22,0:22:99:149,0,728	0/0:26,0:26:63.04:0,63,1635	0/0:23,0:23:54.19:0,54,1887	0/0:134,0:133:99:0,373,12409	0/0:26,0:26:63.22:0,63,2090	0/0:15,0:15:36.12:0,36,1171	0/0:54,0:54:99:0,157,5247	0/0:20,0:20:23.77:0,24,681	0/1:43,0:42:99:147,0,1145	0/1:15,0:14:78.98:79,0,478	0/1:5,0:5:45.52:46,0,150
chr10	3335908	.	GT	G	6475.23	PASS	AB=0.795;AC=14;AF=0.250;AN=56;BaseQRankSum=17.619;DP=1040;FS=3.387;HRun=2;HaplotypeScore=136.1870;InbreedingCoeff=0.7886;MQ=64.38;MQ0=3;MQRankSum=-6.545;QD=26.65;ReadPosRankSum=4.757;VQSLOD=4.6935;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,57:58:99:1895,147,0	0/0:19,0:19:51.17:0,51,761	0/0:31,0:25:58.53:0,59,677	0/0:36,0:26:66.16:0,66,871	0/0:14,0:14:42.14:0,42,628	0/0:25,0:25:72.24:0,72,1073	0/0:66,0:66:99:0,193,2831	0/0:4,0:4:1.50:0,2,33	0/0:44,0:44:99:0,129,1926	0/0:28,1:29:48.40:0,48,1197	0/0:15,0:15:45.14:0,45,656	0/0:70,0:70:99:0,202,2907	0/0:64,0:64:99:0,173,2487	0/0:62,0:62:99:0,187,2681	1/1:7,57:64:99:2093,167,0	0/0:38,0:37:99:0,114,1706	0/1:19,0:18:13.14:13,0,14	1/1:5,17:22:54.81:631,55,0	0/0:23,0:23:69.22:0,69,996	0/0:26,0:26:69.20:0,69,965	0/0:136,1:136:99:0,391,5750	0/0:24,0:24:72.22:0,72,1021	0/0:14,0:14:42.12:0,42,592	0/0:56,0:56:99:0,163,2385	1/1:1,19:20:40.68:509,41,0	0/1:12,27:38:8.09:806,0,8	1/1:3,12:14:34.54:403,35,0	1/1:1,4:5:11.25:124,11,0
chr10	3337259	.	A	AT	2768.31	PASS	AB=0.909;AC=13;AF=0.232;AN=56;BaseQRankSum=5.362;DP=737;FS=4.411;HRun=9;HaplotypeScore=96.8259;InbreedingCoeff=0.8849;MQ=78.12;MQ0=0;MQRankSum=-0.589;QD=17.19;ReadPosRankSum=1.379;VQSLOD=3.7533;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:86.89:0,87,746	0/1:9,1:10:9.21:9,0,154	0/0:21,0:21:32.31:0,32,233	0/0:22,0:22:44.61:0,45,379	0/0:25,2:28:4.64:0,5,482	0/0:28,0:28:71.95:0,72,625	0/0:31,0:31:89.93:0,90,769	0/0:37,0:38:85.97:0,86,734	0/0:29,0:29:77.96:0,78,673	0/0:27,0:27:65.98:0,66,573	0/0:20,0:20:53.98:0,54,468	0/0:32,0:32:83.96:0,84,729	0/0:24,0:24:62.96:0,63,543	0/0:15,0:15:32.96:0,33,283	1/1:3,1:25:59.82:318,60,0	0/0:38,0:38:98.05:0,98,854	0/0:32,0:32:63.49:0,63,706	1/1:1,0:19:45.49:228,45,0	0/0:20,0:20:35.96:0,36,312	0/0:26,0:26:62.93:0,63,542	0/0:21,0:21:47.98:0,48,417	0/0:34,0:34:92.96:0,93,804	0/0:24,0:24:65.98:0,66,572	0/0:28,0:28:47.86:0,48,640	1/1:4,0:28:62.74:323,63,0	1/1:7,28:35:55.13:819,55,0	1/1:1,33:34:93.25:1029,93,0	1/1:3,7:10:21.06:232,21,0
chr10	3338788	.	G	GCA	1643.30	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=12.029;DP=671;FS=3.410;HRun=0;HaplotypeScore=115.7129;InbreedingCoeff=0.6842;MQ=61.19;MQ0=2;MQRankSum=-6.026;QD=10.14;ReadPosRankSum=-0.115;VQSLOD=3.4217;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:25:10.73:11,0,17	0/0:17,0:17:51.09:0,51,768	0/0:16,0:8:20.27:0,20,202	0/1:13,0:6:3.40:3,0,14	0/0:23,0:23:66.01:0,66,923	0/0:18,0:18:54.14:0,54,823	0/0:37,0:37:99:0,108,1582	0/0:25,0:25:72.24:0,72,1055	0/0:24,0:24:72.19:0,72,1116	0/0:26,0:26:75.23:0,75,1173	0/0:17,0:17:42.09:0,42,624	0/0:23,0:23:63.10:0,63,865	0/0:24,0:24:63.20:0,63,987	0/0:36,0:36:99:0,108,1680	0/1:25,0:25:6.75:178,0,7	0/0:32,0:32:96.22:0,96,1472	0/0:23,0:23:39.09:0,39,529	1/1:9,0:9:0.65:23,1,0	0/0:21,0:21:59.92:0,60,833	0/0:20,0:20:57.12:0,57,848	0/0:43,0:43:99:0,119,1871	0/0:37,0:37:99:0,105,1553	0/0:19,0:19:57.19:0,57,921	0/0:28,0:28:72.21:0,72,1118	1/1:26,0:26:51.37:292,51,0	1/1:20,13:33:9.83:725,10,0	1/1:8,15:24:25.65:383,26,0	1/1:3,4:7:12.80:196,13,0
chr10	3338790	.	G	GCGCACA	4038.78	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=8.371;DP=691;FS=9.505;HRun=0;HaplotypeScore=164.3664;InbreedingCoeff=0.4496;MQ=60.47;MQ0=2;MQRankSum=-6.249;QD=18.87;ReadPosRankSum=2.073;VQSLOD=2.8993;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,2:33:6.02:72,6,0	0/0:16,0:17:51.16:0,51,1082	0/0:21,0:9:17.06:0,17,261	0/0:13,0:6:8.69:0,9,111	0/0:23,0:23:66.17:0,66,1389	0/0:17,0:18:51.12:0,51,975	0/0:34,0:35:99:0,102,1917	0/1:10,0:25:59.15:303,0,59	0/0:21,0:23:69.16:0,69,1350	0/0:24,0:25:74.41:0,74,1394	0/0:14,0:16:42.09:0,42,786	0/0:23,0:23:57.15:0,57,1221	0/0:24,0:24:69.15:0,69,1321	0/0:33,0:35:99:0,105,2087	1/1:5,19:27:24.08:807,24,0	0/0:33,0:33:93.23:0,93,1976	0/1:12,0:22:41.53:42,0,135	1/1:4,4:11:9.03:267,9,0	0/0:21,0:22:60.14:0,60,1129	0/0:20,0:20:54.17:0,54,1166	0/0:42,0:45:99:0,125,2180	0/0:33,0:38:96.02:0,96,2001	0/0:21,0:21:60.12:0,60,1179	0/0:21,0:25:63.14:0,63,1239	1/1:5,27:33:42.14:1515,42,0	0/1:33,0:33:99:582,0,152	0/1:23,0:23:51.16:315,0,51	0/1:7,0:7:20.29:137,0,20
chr10	3339884	.	TC	T	3794.63	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=10.527;DP=722;FS=12.487;HRun=1;HaplotypeScore=76.0582;InbreedingCoeff=1.0000;MQ=85.11;MQ0=0;MQRankSum=-3.084;QD=38.33;ReadPosRankSum=-1.517;VQSLOD=2.5431;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,42:52:99:1866,138,0	0/0:16,0:16:48.14:0,48,742	0/0:26,0:26:78.23:0,78,1182	0/0:21,0:21:63.20:0,63,962	0/0:22,0:22:66.23:0,66,1054	0/0:24,0:24:69.22:0,69,1080	0/0:17,0:17:51.17:0,51,815	1/1:0,27:27:81.27:1131,81,0	0/0:19,0:19:57.18:0,57,886	0/0:27,0:27:78.26:0,78,1226	0/0:17,0:17:51.17:0,51,811	0/0:31,0:31:93.32:0,93,1473	0/0:28,0:28:84.29:0,84,1331	0/0:34,0:34:99:0,102,1631	0/0:35,0:35:99:0,105,1610	0/0:26,0:26:78.25:0,78,1224	1/1:0,20:20:57.19:797,57,0	0/0:19,0:19:57.16:0,57,879	0/0:25,0:25:75.26:0,75,1199	0/0:27,0:27:78.27:0,78,1240	0/0:29,0:29:87.28:0,87,1365	0/0:31,0:31:93.32:0,93,1486	0/0:23,0:23:69.24:0,69,1097	0/0:27,0:27:81.28:0,81,1292	0/0:23,0:23:69.24:0,69,1101	0/0:37,0:37:99:0,111,1726	0/0:25,0:25:75.26:0,75,1194	0/0:14,0:14:39.13:0,39,623
chr10	3339948	.	TGAA	T	1776.74	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.990;DP=768;FS=9.121;HRun=0;HaplotypeScore=120.3377;InbreedingCoeff=0.9960;MQ=83.87;MQ0=0;MQRankSum=-4.792;QD=36.26;ReadPosRankSum=3.112;VQSLOD=4.4131;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,44:49:99:1872,108,0	0/0:9,0:9:24.07:0,24,522	0/0:29,0:29:81.26:0,81,1656	0/0:16,0:16:48.08:0,48,1003	0/0:19,0:19:54.04:0,54,1175	0/0:23,0:23:66.23:0,66,1495	0/0:21,0:21:60.19:0,60,1315	0/0:33,0:33:96.32:0,96,2144	0/0:24,0:24:72.25:0,72,1703	0/0:28,0:28:84.29:0,84,1964	0/0:18,0:18:54.19:0,54,1251	0/0:40,0:40:99:0,114,2643	0/0:28,0:28:84.29:0,84,1986	0/0:32,0:32:93.31:0,93,2126	0/0:36,0:36:99:0,108,2510	0/0:26,0:26:78.27:0,78,1801	0/0:28,0:28:81.27:0,81,1825	0/0:19,0:19:51.14:0,51,1129	0/0:42,0:42:99:0,126,2864	0/0:23,0:23:69.24:0,69,1590	0/0:57,0:57:99:0,172,3970	0/0:22,0:22:66.23:0,66,1516	0/0:19,0:19:57.18:0,57,1229	0/0:33,0:33:99:0,99,2285	0/0:22,0:22:66.22:0,66,1518	0/0:25,0:25:75.25:0,75,1707	0/0:39,0:39:99:0,117,2651	0/0:8,0:8:24.08:0,24,567
chr10	3342603	.	CA	C	1693.75	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=14.133;DP=548;FS=4.483;HRun=2;HaplotypeScore=91.5377;InbreedingCoeff=0.9933;MQ=82.12;MQ0=0;MQRankSum=-13.633;QD=15.68;ReadPosRankSum=2.323;VQSLOD=3.7538;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,21:27:62.33:422,62,0	0/0:7,0:7:21.07:0,21,314	0/0:20,0:20:60.14:0,60,821	0/0:14,0:14:42.05:0,42,530	0/0:15,0:15:36.12:0,36,537	0/0:27,0:27:78.24:0,78,1126	0/0:25,0:25:75.23:0,75,1079	0/0:32,0:32:96.30:0,96,1368	0/0:15,0:15:45.10:0,45,648	0/0:17,0:17:48.13:0,48,679	0/0:12,0:12:36.02:0,36,455	0/0:16,0:16:48.16:0,48,717	0/0:23,0:23:69.23:0,69,1034	0/0:22,0:22:66.21:0,66,966	1/1:0,13:13:36.10:241,36,0	0/0:27,0:27:81.23:0,81,1154	0/0:29,0:29:87.27:0,87,1257	1/1:3,15:18:42.62:305,43,0	0/0:28,0:28:78.25:0,78,1138	0/0:16,0:16:48.16:0,48,717	0/0:40,0:40:99:0,120,1737	0/0:12,0:12:35.95:0,36,508	0/0:20,0:20:54.14:0,54,749	0/0:23,0:23:69.20:0,69,1008	1/1:2,13:15:38.49:257,38,0	1/1:6,12:18:44.69:327,45,0	1/1:2,11:13:35.66:254,36,0	1/1:1,3:4:11.91:86,12,0
chr10	3342608	.	GTAGCAGGA	G	6375.74	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=14.907;DP=535;FS=6.785;HRun=0;HaplotypeScore=153.3560;InbreedingCoeff=0.9883;MQ=84.16;MQ0=0;MQRankSum=-14.252;QD=64.40;ReadPosRankSum=1.693;VQSLOD=4.7567;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,21:27:66.21:1467,66,0	0/0:7,0:7:21.07:0,21,898	0/0:22,0:22:63:0,63,2609	0/0:13,0:13:39.13:0,39,1578	0/0:12,0:12:33.11:0,33,1527	0/0:26,0:26:78.27:0,78,3509	0/0:24,0:24:72.19:0,72,2921	0/0:33,0:33:99:0,99,4066	0/0:15,0:15:42.14:0,42,1874	0/0:16,0:16:48.16:0,48,2002	0/0:11,0:11:30.10:0,30,1294	0/0:16,0:16:42.14:0,42,1874	0/0:24,0:24:72.25:0,72,2985	0/0:20,0:20:60.21:0,60,2725	1/1:0,13:13:39.05:879,39,0	0/0:27,0:27:81.23:0,81,3631	0/0:31,0:31:90.30:0,90,3900	1/1:2,15:17:51.09:1140,51,0	0/0:28,0:28:81.27:0,81,3185	0/0:18,0:18:54.19:0,54,2045	0/0:41,0:41:99:0,123,5552	0/0:12,0:12:33.11:0,33,1501	0/0:18,0:18:51.18:0,51,2246	0/0:22,0:22:66.23:0,66,2809	1/1:0,13:13:39.13:930,39,0	1/1:3,12:15:45.11:1012,45,0	1/1:0,10:11:30.10:726,30,0	1/1:0,3:3:9.03:221,9,0
chr10	3343021	.	G	GT	1387.21	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=7.497;DP=551;FS=10.920;HRun=0;HaplotypeScore=85.3368;InbreedingCoeff=0.9924;MQ=75.01;MQ0=9;MQRankSum=-3.026;QD=23.12;ReadPosRankSum=0.982;VQSLOD=4.5130;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:56.97:0,57,410	0/0:5,0:5:15.05:0,15,210	0/0:29,0:19:31.43:0,31,595	0/0:27,0:12:32.76:0,33,349	0/0:13,0:13:39.12:0,39,528	0/0:24,0:24:72.24:0,72,1004	0/0:15,0:15:44.01:0,44,563	0/0:25,0:25:75.23:0,75,1024	0/0:13,0:13:39.13:0,39,544	0/0:27,0:27:81.26:0,81,1118	0/0:16,0:16:39.01:0,39,544	0/0:18,0:18:45.34:0,45,664	0/0:17,0:17:36.03:0,36,495	0/0:26,0:26:78.26:0,78,1080	0/0:31,0:31:77.69:0,78,429	0/0:19,0:19:51.17:0,51,706	0/0:19,0:19:45.15:0,45,620	0/0:17,0:17:31.97:0,32,191	0/0:26,0:26:66.13:0,66,899	0/0:25,0:25:72.23:0,72,979	0/0:8,0:8:21.07:0,21,294	0/0:14,0:14:42.13:0,42,568	0/0:14,0:14:42.14:0,42,582	0/0:19,0:19:54.18:0,54,753	0/0:16,0:18:40.02:0,40,209	1/1:8,15:24:61.61:629,62,0	1/1:5,14:21:45.15:528,45,0	1/1:5,10:15:38.43:373,38,0
chr10	3343027	.	T	TG	931.83	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=8.372;DP=612;FS=1.487;HRun=0;HaplotypeScore=100.0351;InbreedingCoeff=0.3329;MQ=68.53;MQ0=18;MQRankSum=-5.883;QD=8.63;ReadPosRankSum=2.884;VQSLOD=3.8261;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,22:33:58.01:866,58,0	0/0:5,0:5:15.05:0,15,209	0/0:32,0:15:13.45:0,13,165	0/0:38,0:14:30.32:0,30,338	0/0:15,0:15:45.13:0,45,597	0/0:25,0:25:72.22:0,72,960	0/0:16,0:16:40.12:0,40,569	0/0:23,0:23:29.22:0,29,146	0/0:14,0:14:39.12:0,39,523	0/0:28,0:28:78.20:0,78,1039	0/0:21,0:21:60.56:0,61,721	0/0:18,0:18:48.35:0,48,707	0/0:16,0:16:35.98:0,36,464	0/0:27,0:27:81.21:0,81,1035	0/0:31,0:31:91.06:0,91,1142	0/0:21,0:21:63.15:0,63,773	0/0:20,0:20:52.46:0,52,672	0/0:18,0:18:25.23:0,25,466	0/0:30,0:30:79.44:0,79,988	0/0:24,0:24:72.21:0,72,957	0/0:12,0:11:24.07:0,24,320	0/0:15,0:15:45.12:0,45,582	0/0:14,0:13:39.13:0,39,544	0/0:20,0:20:57.17:0,57,765	0/0:21,0:21:57.99:0,58,647	0/1:29,0:29:61.85:62,0,110	0/1:25,0:25:82.02:93,0,82	0/1:21,0:21:34.46:34,0,150
chr10	3343049	.	GT	G	1933.63	PASS	AB=0.806;AC=17;AF=0.304;AN=56;BaseQRankSum=7.923;DP=625;FS=4.645;HRun=12;HaplotypeScore=90.5526;InbreedingCoeff=0.6003;MQ=66.42;MQ0=20;MQRankSum=-0.740;QD=8.79;ReadPosRankSum=0.932;VQSLOD=3.0151;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:33:66.61:0,67,368	0/1:5,1:6:5.24:5,0,123	0/0:48,0:20:32.27:0,32,242	0/0:39,0:16:28.91:0,29,216	0/0:21,0:21:28.77:0,29,464	0/0:18,1:19:21.84:0,22,393	0/1:13,3:18:30.93:31,0,222	1/1:4,0:26:39.49:116,39,0	0/0:18,0:18:48.06:0,48,473	0/0:26,1:28:38.67:0,39,572	0/0:28,1:29:54.85:0,55,718	0/0:20,0:20:50.98:0,51,466	0/0:9,0:14:20.87:0,21,190	0/0:24,1:25:30.80:0,31,467	1/1:8,16:25:48.08:358,48,0	0/1:13,2:17:21.42:21,0,303	0/0:8,0:19:31.74:0,32,205	0/1:3,16:20:7.96:240,0,8	0/0:24,1:24:21.84:0,22,397	0/0:19,0:19:46.25:0,46,437	0/1:10,2:14:42.82:43,0,96	0/0:16,0:16:33.06:0,33,330	0/0:12,1:12:30.05:0,30,299	0/0:17,1:18:22.74:0,23,405	1/1:2,22:24:53.77:418,54,0	1/1:8,14:23:40.84:308,41,0	1/1:10,14:25:13.35:277,13,0	1/1:5,15:21:19.08:312,19,0
chr10	3343217	.	A	ACC	9440.19	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-14.757;DP=682;FS=12.278;HRun=1;HaplotypeScore=81.0928;InbreedingCoeff=0.9993;MQ=82.49;MQ0=2;MQRankSum=-0.924;QD=46.05;ReadPosRankSum=0.609;VQSLOD=3.6142;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,32:32:69.24:1332,69,0	0/0:13,0:13:39.12:0,39,572	0/0:17,0:17:35.64:0,36,560	0/0:24,0:24:66.06:0,66,916	0/0:25,0:25:69.22:0,69,1035	0/0:20,0:20:57.19:0,57,868	0/0:28,0:28:84.24:0,84,1240	1/1:3,33:36:99:1665,99,0	0/0:34,0:34:99:0,99,1458	0/0:34,0:34:96.11:0,96,1416	0/0:15,0:15:45.13:0,45,643	0/0:22,0:22:63.20:0,63,937	0/0:23,0:23:69.19:0,69,987	0/0:24,0:24:72.22:0,72,1060	1/1:0,24:24:56.85:1101,57,0	0/0:29,0:29:81.26:0,81,1217	0/0:31,0:31:90.31:0,90,1377	1/1:0,23:25:57.20:1101,57,0	0/0:28,0:27:78.16:0,78,1042	0/0:16,0:16:42.13:0,42,604	0/0:30,0:30:90.29:0,90,1344	0/0:21,0:21:60.20:0,60,914	0/0:15,0:14:42.14:0,42,643	0/0:28,0:28:84.19:0,84,1193	1/1:0,17:16:42.14:811,42,0	1/1:2,35:37:65.35:1884,65,0	1/1:0,22:22:60.21:1158,60,0	1/1:1,10:11:21.07:387,21,0
chr10	3344174	.	TTC	T	500.43	PASS	AB=0.944;AC=23;AF=0.460;AN=50;BaseQRankSum=4.392;DP=560;FS=10.018;HRun=0;HaplotypeScore=91.5815;InbreedingCoeff=0.0524;MQ=70.36;MQ0=12;MQRankSum=-0.928;QD=1.68;ReadPosRankSum=2.906;VQSLOD=1.0382;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:28:0,28,213	0/1:13,0:13:0.01:0,0,73	./.	./.	0/1:19,0:19:27.64:28,0,56	0/1:16,3:19:52.60:53,0,77	0/1:19,1:20:17.40:17,0,138	0/0:28,0:28:8.91:0,9,61	0/1:21,0:21:7.92:8,0,151	0/1:18,2:20:20.30:20,0,87	0/0:7,0:6:3:0,3,25	0/1:15,3:18:78.91:79,0,112	0/0:19,0:19:14.97:0,15,175	1/1:16,5:21:15.04:162,15,0	1/1:6,0:15:9.46:44,9,0	0/0:15,0:15:9.01:0,9,112	0/0:32,0:35:44.88:0,45,429	1/1:13,0:17:8.52:42,9,0	1/1:12,0:13:2.84:14,3,0	0/1:20,1:21:20.31:20,0,82	0/1:20,2:22:30.39:56,0,30	0/1:12,1:13:17.94:26,0,18	0/0:18,1:18:18.02:0,18,207	0/0:28,1:29:0.66:0,1,283	1/1:11,0:21:17.04:84,17,0	./.	1/1:13,0:12:0.47:1,0,0	0/1:11,0:9:0:0,0,0
chr10	3344262	.	C	CGT	246.52	PASS	AB=0.928;AC=9;AF=0.161;AN=56;BaseQRankSum=6.210;DP=570;FS=19.241;HRun=0;HaplotypeScore=119.3967;InbreedingCoeff=0.2380;MQ=63.19;MQ0=10;MQRankSum=-5.454;QD=1.76;ReadPosRankSum=-3.662;VQSLOD=-0.4575;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:20:2.34:25,2,0	0/0:5,0:5:15.05:0,15,213	0/0:30,0:18:42.12:0,42,569	0/0:33,0:19:35.11:0,35,438	0/0:18,0:18:51.15:0,51,695	0/0:17,0:17:48.15:0,48,661	0/0:22,0:22:52.69:0,53,768	0/1:24,1:25:92.38:92,0,427	0/0:21,0:21:53.92:0,54,762	0/0:24,0:24:69.07:0,69,915	0/0:10,0:9:14.84:0,15,209	0/0:17,0:17:51.15:0,51,707	0/0:18,0:18:54.18:0,54,737	0/0:32,0:32:81.20:0,81,1126	0/1:29,0:28:35.50:36,0,124	0/0:19,0:19:54.18:0,54,767	0/0:29,0:25:66.16:0,66,855	0/0:17,0:17:13.23:0,13,305	0/0:10,0:10:24.08:0,24,342	0/0:18,0:18:48.15:0,48,663	0/0:32,0:29:74.84:0,75,899	0/0:16,0:16:39.13:0,39,556	0/0:10,0:10:30.08:0,30,398	0/0:32,0:32:87.23:0,87,1199	0/1:20,0:19:11.64:12,0,91	0/1:21,2:21:34.85:35,0,523	0/1:13,6:18:78.49:78,0,293	1/1:1,3:3:8.99:108,9,0
chr10	3344270	.	C	CGT	1060.13	PASS	AB=0.978;AC=19;AF=0.339;AN=56;BaseQRankSum=4.860;DP=596;FS=3.551;HRun=0;HaplotypeScore=113.5500;InbreedingCoeff=0.6492;MQ=54.98;MQ0=12;MQRankSum=-3.461;QD=5.20;ReadPosRankSum=-0.541;VQSLOD=3.0015;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:19:2.35:33,2,0	0/0:7,0:7:15.04:0,15,173	0/0:31,0:13:9.02:0,9,99	0/0:33,0:14:10.94:0,11,110	0/0:19,0:21:35.64:0,36,389	0/0:19,0:19:39.11:0,39,452	0/0:24,0:25:17.74:0,18,430	1/1:25,0:25:10.99:110,11,0	0/0:25,0:25:22.84:0,23,477	0/0:26,0:28:17.30:0,17,379	0/0:10,0:9:8.81:0,9,95	0/0:17,0:17:33.06:0,33,368	0/0:17,0:20:38.61:0,39,385	0/0:30,0:32:55.28:0,55,664	1/1:28,0:27:8.10:51,8,0	0/0:19,0:20:38.93:0,39,421	1/1:9,21:26:7.32:570,7,0	1/1:15,0:15:9.64:55,10,0	0/1:10,0:11:2.65:3,0,146	0/0:15,0:17:8.69:0,9,218	0/0:29,0:28:47.29:0,47,515	0/0:16,0:18:31.35:0,31,404	0/1:13,1:14:16.72:17,0,274	0/0:36,0:37:81.24:0,81,897	1/1:17,0:16:5.17:61,5,0	0/1:23,0:21:21.58:96,0,22	1/1:17,0:16:13.95:137,14,0	1/1:5,0:4:11.69:113,12,0
chr10	3345476	.	C	CAGA	3066.79	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-6.170;DP=723;FS=5.280;HRun=0;HaplotypeScore=98.0897;InbreedingCoeff=0.9995;MQ=87.08;MQ0=0;MQRankSum=-4.155;QD=61.34;ReadPosRankSum=1.179;VQSLOD=5.5915;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,42:50:99:3162,144,0	0/0:12,0:12:33.11:0,33,563	0/0:29,0:29:79.82:0,80,1302	0/0:20,0:20:60.21:0,60,1019	0/0:23,0:23:66.22:0,66,1094	0/0:26,0:26:78.27:0,78,1331	0/0:27,0:27:81.26:0,81,1349	0/0:39,0:39:99:0,102,1739	0/0:20,0:20:60.21:0,60,1019	0/0:29,0:29:84.29:0,84,1432	0/0:20,0:20:57.18:0,57,944	0/0:27,0:27:78.25:0,78,1296	0/0:21,0:21:57.15:0,57,899	0/0:23,0:23:69.24:0,69,1177	0/0:32,0:32:93.32:0,93,1578	0/0:24,0:24:66.23:0,66,1126	0/0:37,0:37:99:0,111,1865	0/0:22,0:22:60.20:0,60,1023	0/0:33,0:33:96.33:0,96,1626	0/0:26,0:26:75.26:0,75,1279	0/0:26,0:26:78.27:0,78,1331	0/0:20,0:20:60.21:0,60,1018	0/0:19,0:19:57.20:0,57,969	0/0:30,0:30:84.29:0,84,1428	0/0:22,0:22:57.19:0,57,972	0/0:28,0:28:81.28:0,81,1382	0/0:27,0:27:78.25:0,78,1304	0/0:11,0:11:33.11:0,33,563
chr10	3345593	.	TG	T	1436.49	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.570;DP=737;FS=4.451;HRun=5;HaplotypeScore=83.9039;InbreedingCoeff=0.9999;MQ=86.32;MQ0=0;MQRankSum=-3.739;QD=26.12;ReadPosRankSum=1.432;VQSLOD=3.6127;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,49:55:99:1531,135,0	0/0:12,0:12:36.10:0,36,475	0/0:24,0:23:65.75:0,66,880	0/0:25,0:25:69.22:0,69,926	0/0:23,0:23:69.21:0,69,915	0/0:28,0:28:72.22:0,72,958	0/0:27,0:27:81.27:0,81,1108	0/0:43,0:42:99:0,118,781	0/0:20,0:20:57.19:0,57,780	0/0:31,0:31:78.25:0,78,1054	0/0:21,0:21:63.19:0,63,829	0/0:18,0:18:54.18:0,54,738	0/0:20,0:20:57.18:0,57,763	0/0:25,0:25:75.25:0,75,1025	0/0:26,0:26:72.21:0,72,938	0/0:23,0:23:63.20:0,63,846	0/0:28,0:28:84.26:0,84,1131	0/0:23,0:23:66.22:0,66,885	0/0:25,0:25:69.23:0,69,939	0/0:35,0:35:99:0,102,1379	0/0:30,0:30:90.27:0,90,1199	0/0:33,0:33:90.30:0,90,1230	0/0:16,0:16:48.16:0,48,656	0/0:24,0:24:66.22:0,66,901	0/0:25,0:25:69.22:0,69,915	0/0:36,0:36:96.30:0,96,1270	0/0:22,0:22:60.16:0,60,786	0/0:19,0:19:57.16:0,57,732
chr10	3349663	.	GC	G	1991.95	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.370;DP=766;FS=3.254;HRun=1;HaplotypeScore=75.4487;InbreedingCoeff=0.9978;MQ=82.22;MQ0=0;MQRankSum=-1.877;QD=31.62;ReadPosRankSum=3.162;VQSLOD=3.4954;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,138,2183	0/0:14,0:14:42.14:0,42,671	0/0:20,0:20:52.89:0,53,735	0/0:24,0:24:54.27:0,54,898	0/0:21,0:21:60.19:0,60,936	0/0:15,0:15:45.15:0,45,715	0/0:36,0:36:99:0,108,1703	0/0:26,0:26:78.26:0,78,1223	0/0:27,0:27:81.26:0,81,1272	0/0:31,0:31:93.32:0,93,1485	0/0:12,0:12:36.12:0,36,576	0/0:35,0:35:99:0,105,1672	0/0:25,0:25:75.26:0,75,1199	0/0:38,0:38:99:0,114,1818	0/0:29,0:29:87.27:0,87,1345	0/0:28,0:28:84.29:0,84,1343	0/0:25,0:25:75.26:0,75,1197	0/0:26,0:25:75.26:0,75,1191	0/0:19,0:19:57.17:0,57,883	0/0:22,0:22:66.23:0,66,1055	0/0:67,0:67:99:0,199,3163	0/0:26,0:26:78.27:0,78,1243	0/0:14,0:14:42.13:0,42,649	0/0:50,0:50:99:0,150,2343	0/0:27,0:27:81.28:0,81,1293	1/1:1,23:24:24.26:917,24,0	1/1:0,28:28:66.21:923,66,0	1/1:0,11:11:21.06:294,21,0
chr10	3350133	.	A	AGT	286.96	PASS	AB=0.865;AC=4;AF=0.071;AN=56;BaseQRankSum=5.743;DP=724;FS=20.492;HRun=0;HaplotypeScore=98.1366;InbreedingCoeff=0.4913;MQ=71.69;MQ0=8;MQRankSum=-1.301;QD=5.63;ReadPosRankSum=-3.515;VQSLOD=0.7793;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:95.66:0,96,1181	0/0:5,0:5:12.04:0,12,153	0/0:46,0:24:27.46:0,27,310	0/0:39,0:10:15.02:0,15,176	0/0:12,0:12:33.09:0,33,403	0/0:25,0:25:72.22:0,72,907	0/0:29,0:29:63.19:0,63,789	0/0:28,0:28:62.16:0,62,743	0/0:33,0:33:81.70:0,82,1005	0/0:29,0:29:66.21:0,66,836	0/0:14,0:14:27.08:0,27,337	0/0:24,0:24:60.19:0,60,757	0/0:25,0:25:54.10:0,54,660	0/0:16,0:16:39.12:0,39,483	0/0:44,0:44:81.90:0,82,1009	0/0:28,0:28:75.23:0,75,947	0/0:32,0:32:11.29:0,11,337	0/0:30,0:30:47.67:0,48,539	0/0:16,0:16:45.10:0,45,556	0/0:18,0:18:45.13:0,45,554	0/0:49,0:48:99:0,111,1363	0/0:14,0:14:39.11:0,39,480	0/0:19,0:19:51.16:0,51,649	0/0:39,0:39:96.27:0,96,1198	0/0:19,0:19:29.30:0,29,256	0/1:17,9:27:9.73:219,0,10	1/1:16,0:17:21.74:147,22,0	0/1:7,0:7:12.57:36,0,13
chr10	3350422	.	A	AG	1356.78	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=0.683;DP=484;FS=4.261;HRun=3;HaplotypeScore=69.1632;InbreedingCoeff=0.9221;MQ=66.01;MQ0=4;MQRankSum=-0.976;QD=33.92;ReadPosRankSum=0.434;VQSLOD=4.1268;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:81.71:0,82,961	0/0:3,0:2:6.02:0,6,72	0/0:17,0:10:23.86:0,24,288	0/0:18,0:13:20.42:0,20,205	0/0:16,0:16:39.11:0,39,457	0/0:19,0:19:54.17:0,54,647	0/0:12,0:12:30.09:0,30,360	0/0:17,0:17:42.13:0,42,504	0/0:13,0:13:33.10:0,33,396	0/0:24,0:24:63.19:0,63,746	0/0:13,0:13:39.12:0,39,466	0/0:13,0:13:39.09:0,39,452	0/0:19,0:19:54.17:0,54,648	0/0:23,0:23:60.15:0,60,692	0/0:36,0:36:99:0,99,1176	0/0:19,0:19:57.17:0,57,684	0/0:20,0:20:52.40:0,52,614	0/0:20,0:20:51.16:0,51,612	0/0:9,0:9:27.07:0,27,314	0/0:13,0:13:36.11:0,36,431	0/0:18,0:17:48.14:0,48,566	0/0:15,0:15:39.08:0,39,442	0/0:15,0:15:45.13:0,45,526	0/0:14,0:14:42.13:0,42,504	0/0:24,0:24:63.18:0,63,741	1/1:0,21:22:66.15:880,66,0	1/1:0,16:16:39.13:545,39,0	1/1:1,1:2:6.01:67,6,0
chr10	3350445	.	AAGGG	A	2112.38	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=7.934;DP=467;FS=1.250;HRun=0;HaplotypeScore=83.2388;InbreedingCoeff=0.8770;MQ=64.78;MQ0=7;MQRankSum=-1.080;QD=29.75;ReadPosRankSum=3.459;VQSLOD=3.7223;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:74.31:0,74,1666	0/0:2,0:2:6.02:0,6,150	0/0:31,0:10:12.03:0,12,239	0/0:28,0:14:3.42:0,3,69	0/0:11,0:11:24.08:0,24,602	0/0:20,0:20:51.17:0,51,1269	0/0:14,0:15:24.49:0,24,712	0/0:16,0:16:36.12:0,36,862	0/0:11,0:12:30.10:0,30,745	0/0:20,0:20:42.14:0,42,1039	0/0:13,0:13:30.10:0,30,697	0/0:13,0:13:36.10:0,36,785	0/0:18,0:18:45.15:0,45,1121	0/0:22,0:22:45.15:0,45,1111	1/1:5,26:31:67.78:1137,68,0	0/0:16,0:16:36.12:0,36,868	0/0:17,0:17:39.09:0,39,839	1/1:4,14:18:30.10:515,30,0	0/0:6,0:6:15.05:0,15,347	0/0:14,0:14:36.12:0,36,860	0/0:16,0:15:39.13:0,39,971	0/0:15,0:15:39.13:0,39,960	0/0:14,0:14:33.11:0,33,794	0/0:9,0:9:27.09:0,27,651	1/1:6,16:22:36.12:602,36,0	0/0:22,0:22:51.18:0,51,1225	0/0:15,0:15:36.12:0,36,896	0/0:4,0:4:9.03:0,9,225
chr10	3351435	.	AG	A	2181.94	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=10.264;DP=748;FS=0.000;HRun=7;HaplotypeScore=84.9400;InbreedingCoeff=0.9998;MQ=88.68;MQ0=0;MQRankSum=-1.487;QD=24.52;ReadPosRankSum=2.251;VQSLOD=4.0525;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:84.18:0,84,1023	0/0:14,0:14:33.11:0,33,415	0/0:33,0:33:92.35:0,92,1060	0/0:24,0:24:43.53:0,44,623	0/0:35,0:35:87.24:0,87,1050	0/0:36,0:36:99:0,99,1203	0/0:18,0:18:33.08:0,33,390	0/0:33,0:34:84.19:0,84,984	0/0:26,0:26:69.20:0,69,844	0/0:31,0:31:81.25:0,81,1009	0/0:19,0:19:51.15:0,51,630	0/0:30,0:30:87.22:0,87,1053	0/0:37,0:37:99:0,99,1243	0/0:26,0:26:78.23:0,78,950	1/1:3,41:44:99:1132,111,0	0/0:24,0:24:69.22:0,69,862	0/0:20,0:20:57.16:0,57,686	1/1:1,15:16:39.09:398,39,0	0/0:18,0:18:48.15:0,48,593	0/0:27,0:27:66.18:0,66,801	0/0:26,0:26:72.18:0,72,863	0/0:29,0:29:81.21:0,81,966	0/0:21,0:21:51.13:0,51,601	0/0:26,0:26:66.19:0,66,816	1/1:1,28:29:78.17:795,78,0	0/0:23,0:23:48.15:0,48,604	0/0:25,0:25:63.14:0,63,749	0/0:22,0:22:66.21:0,66,830
chr10	3353493	.	T	TACACCCAG	16693.98	PASS	AC=16;AF=0.296;AN=54;BaseQRankSum=2.741;DP=593;FS=6.977;HRun=0;HaplotypeScore=156.9771;InbreedingCoeff=0.9691;MQ=95.71;MQ0=0;MQRankSum=-16.847;QD=89.27;ReadPosRankSum=0.177;VQSLOD=5.2166;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,19:32:63.50:2162,64,0	0/0:8,0:8:24.07:0,24,610	0/0:27,0:28:78.21:0,78,1884	0/0:35,0:35:99:0,99,2399	0/0:20,0:20:60.21:0,60,1614	0/0:12,0:12:36.11:0,36,958	0/0:26,0:26:72.23:0,72,1914	./.	0/0:20,0:20:51.14:0,51,1317	0/0:22,0:22:63.22:0,63,1729	0/0:11,0:11:33.10:0,33,834	0/0:21,0:21:57.17:0,57,1466	0/0:26,0:26:75.26:0,75,2088	0/0:17,0:17:51.10:0,51,1263	1/1:9,22:32:87.22:3351,87,0	0/0:22,0:22:66.23:0,66,1856	1/1:9,11:21:42.09:1697,42,0	1/1:5,9:14:39.12:1527,39,0	0/0:23,0:23:69.22:0,69,1771	0/0:12,0:12:27.09:0,27,752	0/0:41,0:41:99:0,117,3288	0/0:33,0:33:87.76:0,88,2358	0/0:15,0:15:45.14:0,45,1202	0/0:14,0:14:39.13:0,39,1104	1/1:6,18:26:51.13:2138,51,0	1/1:10,20:33:5.36:3286,5,0	1/1:6,15:24:51.18:2135,51,0	1/1:0,3:5:9.03:398,9,0
chr10	3355485	.	T	TGGTCCTGACTGCCACAGA	33164.57	PASS	AB=0.731;AC=13;AF=0.232;AN=56;BaseQRankSum=0.715;DP=767;FS=3.903;HRun=0;HaplotypeScore=336.2358;InbreedingCoeff=0.8988;MQ=87.43;MQ0=0;MQRankSum=-17.723;QD=156.44;ReadPosRankSum=-0.348;VQSLOD=4.0059;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:31,14:48:99:8019,108,0	0/0:11,0:11:30.10:0,30,1245	0/0:33,0:33:75.24:0,75,2884	0/0:26,0:26:57.15:0,57,2292	0/0:28,0:28:72.25:0,72,3396	0/0:22,0:22:48.14:0,48,1885	0/0:28,0:28:72.21:0,72,3256	0/0:36,0:36:84.28:0,84,3382	0/0:31,0:31:84.27:0,84,3980	0/0:28,0:28:72.25:0,72,3344	0/0:24,0:24:60.21:0,60,2805	0/0:20,0:20:51.16:0,51,2109	0/0:27,0:27:69.24:0,69,3270	0/0:28,0:28:75.26:0,75,3619	1/1:20,12:34:93.32:6698,93,0	0/0:21,0:21:57.20:0,57,2754	0/0:29,0:29:66.23:0,66,3022	1/1:12,5:25:30.10:2160,30,0	0/0:17,0:17:42.13:0,42,1706	0/0:25,0:25:69.22:0,69,2971	0/0:47,0:47:99:0,129,5735	0/0:29,0:29:63.22:0,63,2891	0/0:19,0:19:48.16:0,48,2191	0/0:26,0:26:63.22:0,63,2942	1/1:12,10:23:48.16:3587,48,0	0/1:24,8:38:99:5693,0,192	1/1:14,16:34:78.70:5521,79,0	1/1:7,1:10:21.07:1487,21,0
chr10	3356365	.	CT	C	1394.85	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.698;DP=699;FS=6.787;HRun=9;HaplotypeScore=68.9900;InbreedingCoeff=0.9974;MQ=81.40;MQ0=0;MQRankSum=0.591;QD=19.93;ReadPosRankSum=2.560;VQSLOD=4.3078;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:63.18:0,63,718	0/0:21,0:21:54.15:0,54,614	0/0:31,0:31:47.02:0,47,434	0/0:15,0:15:18.59:0,19,221	0/0:34,0:34:87.22:0,87,980	0/0:25,0:25:69.18:0,69,778	0/0:23,0:23:60.18:0,60,692	0/0:54,0:54:99:0,135,1512	0/0:17,0:17:42.12:0,42,483	0/0:35,0:36:96.11:0,96,1078	0/0:25,0:25:69.19:0,69,786	0/0:19,0:19:48.14:0,48,554	0/0:20,0:20:54.16:0,54,618	0/0:17,0:17:51.15:0,51,589	1/1:5,25:30:72.03:659,72,0	0/0:15,0:15:39.12:0,39,450	0/0:30,0:31:81.05:0,81,903	1/1:4,14:18:42.01:384,42,0	0/0:36,0:36:93.22:0,93,1029	0/0:38,0:38:99:0,101,1123	0/0:15,0:15:42.10:0,42,465	0/0:23,0:23:60.18:0,60,688	0/0:23,0:23:63.19:0,63,725	0/0:14,0:16:41.77:0,42,433	1/1:3,19:22:54.03:494,54,0	0/0:23,0:23:57.17:0,57,658	0/0:35,0:35:96.29:0,96,1108	0/0:14,0:14:39.12:0,39,450
chr10	3356550	.	TGTG	T	2657.08	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=7.965;DP=670;FS=2.218;HRun=0;HaplotypeScore=94.8835;InbreedingCoeff=0.9923;MQ=73.74;MQ0=0;MQRankSum=-1.235;QD=22.52;ReadPosRankSum=0.758;VQSLOD=3.1692;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:84.22:0,84,1511	0/0:7,0:7:18.06:0,18,349	0/0:29,0:22:48.16:0,48,811	0/0:33,0:32:36.52:0,37,901	0/0:23,0:23:30.07:0,30,485	0/0:27,0:27:60.10:0,60,1013	0/0:31,0:31:78.24:0,78,1469	1/1:8,18:26:54.10:699,54,0	0/0:20,0:20:51.15:0,51,974	0/0:18,0:18:33.11:0,33,640	0/0:16,0:16:21.05:0,21,350	0/0:18,0:18:48.16:0,48,988	0/0:21,0:21:57.17:0,57,1089	0/0:17,0:17:42.13:0,42,806	0/0:23,0:23:54.17:0,54,1043	0/0:10,0:10:27.08:0,27,519	1/1:6,32:38:59.99:846,60,0	0/0:29,0:29:72.17:0,72,1359	0/0:21,0:21:48.06:0,48,786	0/0:31,0:31:63.13:0,63,1017	0/0:44,0:44:96.29:0,96,1823	0/0:16,0:16:27.08:0,27,466	0/0:18,0:18:27.08:0,27,442	0/0:35,0:35:84.21:0,84,1597	0/0:28,0:28:69.21:0,69,1262	1/1:5,9:14:27.07:364,27,0	1/1:3,20:23:48.16:703,48,0	1/1:3,14:17:15.05:220,15,0
chr10	3358686	.	C	CAAG	257.28	PASS	AC=12;AF=0.240;AN=50;BaseQRankSum=-1.342;DP=351;FS=12.911;HRun=0;HaplotypeScore=54.0541;InbreedingCoeff=0.7609;MQ=79.21;MQ0=32;MQRankSum=-2.680;QD=18.38;ReadPosRankSum=-3.731;VQSLOD=1.0958;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,1:1:3.01:72,3,0	0/0:13,0:12:30.10:0,30,554	0/0:13,0:12:32.14:0,32,555	0/0:19,0:17:48.16:0,48,857	0/0:20,0:18:45.15:0,45,838	0/0:12,0:10:30.09:0,30,528	0/0:27,0:24:69.19:0,69,1172	1/1:3,0:3:3.01:49,3,0	0/0:30,0:29:87.30:0,87,1588	0/0:9,0:6:18.06:0,18,336	0/0:8,0:8:15.05:0,15,277	0/0:17,0:16:42.14:0,42,782	0/0:9,0:8:21.07:0,21,390	0/0:18,0:16:45.15:0,45,829	1/1:1,2:3:6.02:90,6,0	0/0:8,0:8:24.08:0,24,446	./.	./.	0/0:20,0:18:51.17:0,51,947	0/0:15,0:14:39.13:0,39,718	0/0:30,0:26:72.25:0,72,1332	0/0:24,0:20:54.19:0,54,1005	0/0:6,0:6:18.06:0,18,334	0/0:32,0:31:84.23:0,84,1418	1/1:3,1:1:3.01:73,3,0	./.	1/1:0,1:1:3.01:67,3,0	1/1:1,0:1:3.01:46,3,0
chr10	3505457	.	TCA	T	906.15	PASS	AB=0.869;AC=18;AF=0.333;AN=54;BaseQRankSum=6.216;DP=907;FS=8.806;HRun=0;HaplotypeScore=190.0339;InbreedingCoeff=0.2841;MQ=55.11;MQ0=24;MQRankSum=0.703;QD=2.18;ReadPosRankSum=1.041;VQSLOD=1.7379;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:44:2.07:7,2,0	0/0:11,0:11:15.05:0,15,223	./.	0/0:29,0:12:0.47:0,0,1	0/0:29,0:33:23.16:0,23,244	0/0:24,0:24:34.67:0,35,480	0/0:30,0:29:42.09:0,42,561	0/0:35,0:29:2.09:0,2,59	0/0:35,0:32:45.94:0,46,741	0/0:46,0:44:66.83:0,67,885	0/0:25,0:24:24.05:0,24,332	0/1:46,5:51:38.88:39,0,1104	0/1:35,3:36:12.92:13,0,641	0/0:45,1:45:26.99:0,27,1277	0/1:20,0:37:10.99:34,0,11	0/0:36,1:36:20.36:0,20,711	1/1:19,0:26:26.99:132,27,0	1/1:7,0:12:4.86:28,5,0	0/1:14,0:13:5.14:5,0,228	0/0:39,0:38:56.69:0,57,809	0/0:46,0:53:58.14:0,58,943	0/1:41,1:42:18.30:18,0,635	0/0:25,0:25:6.14:0,6,409	0/1:53,1:54:5.01:5,0,1198	0/1:15,0:18:5.55:6,0,16	1/1:17,18:33:6.47:484,6,0	0/1:14,15:28:3.05:162,0,3	1/1:4,7:10:12.03:135,12,0
chr10	3505518	.	CAT	C	38.89	PASS	AB=0.890;AC=3;AF=0.056;AN=54;BaseQRankSum=7.712;DP=1156;FS=23.941;HRun=0;HaplotypeScore=194.5588;InbreedingCoeff=0.0070;MQ=46.02;MQ0=75;MQRankSum=-1.229;QD=0.29;ReadPosRankSum=-5.886;VQSLOD=-0.5560;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:59,0:55:24.08:0,24,453	0/0:10,0:9:21.07:0,21,393	0/0:19,0:4:8.16:0,8,49	0/0:19,0:3:2.97:0,3,111	0/0:41,0:35:48.73:0,49,943	0/0:35,0:32:76.26:0,76,1512	0/0:38,0:33:58.52:0,59,966	0/0:75,0:49:99:0,114,1728	0/0:53,1:48:99:0,105,2009	0/1:78,0:65:1.04:1,0,2071	0/0:35,0:33:42.14:0,42,755	0/0:61,0:58:99:0,103,2250	0/0:35,0:34:78.12:0,78,1237	0/0:44,0:41:78.80:0,79,1745	0/1:23,11:33:9.12:30,0,9	0/0:38,0:37:74.25:0,74,1539	0/0:22,0:19:38.38:0,38,549	0/1:19,2:21:87.27:97,0,87	0/0:36,0:13:33.09:0,33,557	0/0:39,0:32:10.04:0,10,651	0/0:133,0:117:99:0,151,3461	0/0:40,0:38:60.21:0,60,987	0/0:33,0:30:45.12:0,45,890	0/0:61,0:55:99:0,100,1993	./.	0/0:45,1:39:39.32:0,39,1513	0/0:30,0:30:72.12:0,72,1209	0/0:10,0:10:16.70:0,17,252
chr10	3505570	.	CACACAT	C	963.65	PASS	AB=0.956;AC=8;AF=0.143;AN=56;BaseQRankSum=9.226;DP=1274;FS=0.000;HRun=0;HaplotypeScore=225.0912;InbreedingCoeff=0.6472;MQ=48.12;MQ0=61;MQRankSum=-2.263;QD=5.05;ReadPosRankSum=-1.236;VQSLOD=1.8082;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:25,15:35:10.91:122,11,0	0/0:8,0:7:1.71:0,2,452	0/0:55,0:15:19.55:0,20,555	0/0:60,0:16:45.10:0,45,1215	0/0:34,0:29:63.20:0,63,2080	0/0:41,0:37:96.33:0,96,2839	0/0:47,0:44:99:0,103,3100	0/1:47,5:22:99:602,0,116	0/0:43,0:40:95.97:0,96,2952	0/0:81,0:68:99:0,163,4841	0/0:30,0:29:54.19:0,54,1675	0/0:63,0:62:99:0,156,4552	0/0:49,0:49:99:0,129,3709	0/0:60,0:60:99:0,163,4932	1/1:36,1:36:28.97:161,29,0	0/0:53,0:51:99:0,129,4130	0/0:36,0:31:53.61:0,54,566	0/1:30,0:28:99:128,0,181	0/0:34,0:21:63.20:0,63,1830	0/0:35,0:31:54.12:0,54,1509	0/0:143,0:128:99:0,225,6439	0/0:35,0:35:96.33:0,96,3073	0/0:31,0:30:60.20:0,60,1887	0/0:67,0:63:99:0,123,3886	1/1:32,0:32:28.43:101,28,0	0/0:41,0:39:99:0,105,3399	0/0:29,0:29:81.04:0,81,2188	0/0:8,0:7:18.01:0,18,484
chr10	3505572	.	CACAT	C	2443.70	PASS	AB=0.859;AC=8;AF=0.143;AN=56;BaseQRankSum=7.458;DP=1274;FS=1.007;HRun=0;HaplotypeScore=185.1015;InbreedingCoeff=0.6648;MQ=48.20;MQ0=61;MQRankSum=-4.091;QD=13.00;ReadPosRankSum=-2.005;VQSLOD=2.7601;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:39,0:35:5.83:73,6,0	0/0:8,0:7:15.05:0,15,372	0/0:58,0:16:24.56:0,25,483	0/0:62,0:16:45.10:0,45,943	0/0:32,0:28:63.20:0,63,1609	0/0:41,0:37:96.31:0,96,2307	0/0:47,0:44:99:0,103,2476	0/1:52,0:24:70.86:309,0,71	0/0:42,0:39:98.71:0,99,2321	0/0:81,0:68:99:0,165,3815	0/0:33,0:32:62.94:0,63,1372	0/0:62,0:61:99:0,156,3618	0/0:48,0:48:99:0,132,3005	0/0:58,0:58:99:0,162,3816	1/1:17,20:36:47.99:769,48,0	0/0:54,0:52:99:0,135,3298	0/0:36,0:31:23.09:0,23,111	0/1:17,11:27:73.84:730,0,74	0/0:35,0:23:66.17:0,66,1483	0/0:36,0:32:35.14:0,35,1171	0/0:141,0:126:99:0,230,5157	0/0:35,0:35:96.30:0,96,2393	0/0:31,0:30:63.20:0,63,1512	0/0:67,0:64:99:0,125,3010	1/1:7,25:32:37.33:710,37,0	0/0:42,0:40:99:0,108,2677	0/0:29,0:29:80.97:0,81,1728	0/0:8,0:7:17.97:0,18,363
chr10	3505574	.	CAT	C	1760.27	PASS	AB=0.891;AC=8;AF=0.143;AN=56;BaseQRankSum=10.917;DP=1281;FS=0.892;HRun=0;HaplotypeScore=154.3005;InbreedingCoeff=0.5253;MQ=48.20;MQ0=62;MQRankSum=-2.701;QD=7.75;ReadPosRankSum=-0.468;VQSLOD=2.8642;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:39,0:35:9.15:62,0,9	0/0:8,0:7:15.51:0,16,255	0/0:60,0:16:24.22:0,24,441	0/0:64,1:16:44.93:0,45,747	0/0:31,0:27:63.20:0,63,1156	0/0:41,0:37:96.11:0,96,1647	0/0:50,0:48:99:0,109,1797	0/1:54,0:25:61.15:280,0,61	0/0:42,0:39:99:0,102,1735	0/0:78,0:65:99:0,168,2912	0/0:33,0:32:65.87:0,66,1041	0/0:62,0:61:99:0,159,2668	0/0:49,0:49:99:0,138,2295	0/0:57,0:57:99:0,162,2809	1/1:37,1:37:50.14:345,50,0	0/0:53,0:51:99:0,138,2420	0/1:8,28:31:0.53:722,0,1	0/1:28,0:27:39.79:237,0,40	0/0:34,0:23:66.17:0,66,1133	0/0:35,0:31:35.14:0,35,879	0/0:141,0:126:99:0,240,3822	0/0:35,0:35:95.95:0,96,1693	0/0:32,0:31:66.19:0,66,1149	0/0:67,0:64:99:0,131,2195	1/1:32,0:32:38.81:263,39,0	0/0:42,0:40:99:0,108,1938	0/0:30,0:30:83.95:0,84,1327	0/0:9,0:8:20.97:0,21,295
chr10	3505672	.	TAC	T	609.77	PASS	AB=0.987;AC=6;AF=0.115;AN=52;BaseQRankSum=7.832;DP=1114;FS=7.842;HRun=0;HaplotypeScore=134.3418;InbreedingCoeff=0.2456;MQ=49.54;MQ0=64;MQRankSum=-0.762;QD=3.16;ReadPosRankSum=-2.774;VQSLOD=1.5878;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:54,1:53:99:176,0,438	0/0:8,0:8:20.87:0,21,304	./.	./.	0/0:34,0:34:95.96:0,96,1526	0/0:34,0:34:78.24:0,78,1283	0/0:57,0:46:94.41:0,94,1533	0/0:71,0:36:24.59:0,25,801	0/0:47,0:46:99:0,111,1793	0/0:57,0:45:99:0,123,1930	0/0:30,0:28:66.20:0,66,1070	0/0:47,0:47:96.95:0,97,1490	0/0:39,0:39:84.14:0,84,1286	0/0:38,0:37:85.84:0,86,1324	0/1:53,2:54:50.95:51,0,751	0/0:37,0:37:81.02:0,81,1244	1/1:19,11:25:33.98:454,34,0	0/1:28,0:25:26.32:26,0,564	0/0:35,0:17:45.15:0,45,746	0/0:31,0:29:72.20:0,72,1118	0/0:113,0:103:99:0,197,3066	0/0:31,0:30:69.21:0,69,1106	0/0:29,0:27:58.03:0,58,890	0/0:58,0:57:99:0,132,2183	0/1:25,0:24:31.64:32,0,463	0/0:46,0:43:99:0,105,1694	0/0:28,0:27:70.33:0,70,1068	0/0:21,0:21:56.63:0,57,817
chr10	3505704	.	TAC	T	1031.09	PASS	AB=0.991;AC=8;AF=0.143;AN=56;BaseQRankSum=6.492;DP=1131;FS=12.625;HRun=0;HaplotypeScore=158.5858;InbreedingCoeff=0.1551;MQ=49.09;MQ0=62;MQRankSum=-6.911;QD=3.92;ReadPosRankSum=-5.445;VQSLOD=0.0661;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:53,1:53:10.95:11,0,703	0/0:12,0:12:29.92:0,30,476	0/1:10,0:2:1.96:2,0,10	0/0:11,0:3:4.54:0,5,26	0/0:40,0:40:99:0,105,1708	0/0:35,0:34:78.21:0,78,1223	0/0:58,0:47:85.38:0,85,1373	1/1:52,16:40:81.14:961,81,0	0/0:42,0:41:90.12:0,90,1343	0/0:67,0:50:99:0,117,1881	0/0:29,0:27:60.16:0,60,975	0/0:43,0:42:99:0,99,1589	0/0:32,0:31:75.24:0,75,1212	0/0:37,0:36:84.06:0,84,1361	0/1:52,0:50:15.52:16,0,525	0/0:44,0:44:99:0,99,1546	0/1:25,1:21:99:148,0,175	0/1:29,0:26:13.88:14,0,353	0/0:43,0:23:51.17:0,51,847	0/0:40,0:38:90.25:0,90,1437	0/0:112,0:101:99:0,178,2876	0/0:31,0:28:78.13:0,78,1280	0/0:28,0:26:59.82:0,60,978	0/0:64,0:62:99:0,150,2373	0/1:22,0:21:14.31:14,0,353	0/0:48,0:40:99:0,102,1652	0/0:30,0:28:80.36:0,80,1284	0/0:21,0:19:55.40:0,55,872
chr10	3505762	.	CACACTT	C	193.77	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.463;DP=1011;FS=1.173;HRun=0;HaplotypeScore=236.1775;InbreedingCoeff=0.9782;MQ=58.09;MQ0=7;MQRankSum=-3.283;QD=13.84;ReadPosRankSum=-3.626;VQSLOD=2.1798;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:50:73.89:0,74,934	0/0:17,0:17:48.16:0,48,1637	0/0:32,0:18:20.73:0,21,1038	0/0:40,0:23:25.24:0,25,993	0/0:39,0:39:99:0,102,3040	0/0:41,0:40:99:0,105,3340	0/0:32,0:32:82.85:0,83,2542	0/0:49,0:44:99:0,111,1853	0/0:29,0:29:59.99:0,60,2592	0/0:56,0:53:99:0,132,4820	0/0:28,0:28:75.21:0,75,2290	0/0:45,0:45:99:0,130,3984	0/0:43,0:43:99:0,123,3976	0/0:30,0:30:87.28:0,87,2897	0/0:48,0:46:97.05:0,97,1425	0/0:47,0:47:99:0,141,4378	1/1:8,6:12:15.05:282,15,0	0/0:30,0:30:66.14:0,66,992	0/0:22,0:21:60.19:0,60,1980	0/0:41,0:41:99:0,114,3756	0/0:57,0:55:99:0,132,3983	0/0:34,0:34:96.29:0,96,2878	0/0:24,0:24:66.23:0,66,2176	0/0:49,0:48:99:0,132,4131	0/0:17,0:17:44.63:0,45,618	0/0:41,0:41:99:0,123,3880	0/0:34,0:32:99:0,99,3278	0/0:19,0:19:46.66:0,47,1240
chr10	3505768	.	TAC	T	4182.04	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=15.367;DP=958;FS=1.278;HRun=0;HaplotypeScore=143.8140;InbreedingCoeff=0.9815;MQ=59.84;MQ0=5;MQRankSum=-3.163;QD=21.67;ReadPosRankSum=-1.358;VQSLOD=3.3632;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,35:43:64.57:826,65,0	0/0:16,0:16:45.14:0,45,719	0/0:28,0:20:47.95:0,48,755	0/0:34,0:20:18.17:0,18,621	0/0:38,0:38:81.26:0,81,1324	0/0:41,0:40:99:0,102,1703	0/0:29,0:29:75.26:0,75,1255	1/1:15,28:40:81.19:986,81,0	0/0:30,0:30:78.27:0,78,1305	0/0:55,0:53:99:0,138,2283	0/0:27,0:27:63.22:0,63,1046	0/0:41,0:41:99:0,102,1706	0/0:41,0:41:99:0,108,1807	0/0:31,0:31:90.31:0,90,1483	1/1:12,35:45:93.22:1157,93,0	0/0:48,0:48:99:0,123,2057	1/1:14,0:12:7.91:33,8,0	1/1:6,23:29:19.30:614,19,0	0/0:22,0:21:63.19:0,63,1004	0/0:39,0:39:99:0,111,1848	0/0:53,0:51:99:0,114,1887	0/0:34,0:34:81.28:0,81,1352	0/0:25,0:25:63.22:0,63,1043	0/0:45,0:45:99:0,111,1844	1/1:1,16:17:45.14:567,45,0	0/0:38,0:38:96.31:0,96,1559	0/0:35,0:33:93.32:0,93,1556	0/0:15,0:15:21.42:0,21,444
chr10	3506457	.	C	CT	668.56	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-6.042;DP=592;FS=7.388;HRun=9;HaplotypeScore=66.1570;InbreedingCoeff=0.8240;MQ=79.36;MQ0=0;MQRankSum=-2.318;QD=23.88;ReadPosRankSum=0.285;VQSLOD=4.4099;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:92.97:0,93,807	0/0:8,0:8:17.99:0,18,156	0/0:16,0:19:25.10:0,25,257	0/0:21,0:20:31.71:0,32,242	0/0:26,0:26:68.96:0,69,594	0/0:14,0:14:32.99:0,33,287	0/0:17,0:17:41.99:0,42,364	0/0:35,2:37:47.77:0,48,644	0/0:20,0:20:53.98:0,54,469	0/0:26,0:26:68.98:0,69,599	0/0:23,0:23:65.95:0,66,566	0/0:18,0:18:44.98:0,45,391	0/0:16,0:16:41.99:0,42,365	0/0:19,0:19:44.97:0,45,391	0/0:22,0:23:59.01:0,59,501	0/0:23,0:23:50.95:0,51,440	1/1:4,24:28:69.19:763,69,0	0/0:18,1:19:23.81:0,24,436	0/0:23,2:25:3.25:0,3,404	0/0:33,0:33:92.96:0,93,803	0/0:6,0:6:18:0,18,156	0/0:20,0:20:59.99:0,60,521	0/0:20,0:20:50.98:0,51,443	0/0:18,0:18:47.99:0,48,417	0/0:15,0:15:44.99:0,45,390	0/0:23,0:23:62.99:0,63,547	0/0:26,0:26:68.97:0,69,599	0/0:13,0:13:13.38:0,13,264
chr10	3506932	.	GC	G	2149.07	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=14.946;DP=598;FS=10.057;HRun=1;HaplotypeScore=66.0892;InbreedingCoeff=0.8864;MQ=85.57;MQ0=0;MQRankSum=-3.364;QD=14.23;ReadPosRankSum=4.283;VQSLOD=2.1839;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,24:24:69.23:963,69,0	0/0:12,0:12:36.10:0,36,533	0/0:18,0:18:54.15:0,54,776	0/0:22,0:22:56.63:0,57,740	0/0:17,0:17:41.92:0,42,564	0/0:31,0:31:90.25:0,90,1347	0/0:29,0:29:84.25:0,84,1258	1/1:21,0:21:29.48:150,29,0	0/0:17,0:17:51.11:0,51,746	0/0:22,0:22:57.09:0,57,777	0/0:10,0:10:27.55:0,28,399	0/0:23,0:23:63.20:0,63,958	0/0:19,0:19:54.10:0,54,789	0/0:12,0:12:36.12:0,36,560	1/1:31,0:31:51.40:339,51,0	0/0:26,0:26:78.25:0,78,1194	1/1:28,0:28:74.11:397,74,0	1/1:23,0:23:60.27:327,60,0	0/0:22,0:22:63.18:0,63,954	0/0:25,0:25:75.17:0,75,1070	0/0:33,0:33:98.68:0,99,1480	0/0:12,0:12:33.09:0,33,475	0/0:18,0:18:48.11:0,48,676	0/0:18,0:18:51.17:0,51,797	0/1:24,0:24:66.03:151,0,66	0/0:24,0:24:66.22:0,66,1005	0/0:20,0:20:60.15:0,60,897	0/0:17,0:17:51.17:0,51,792
chr10	3506933	.	CG	C	3653.91	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=12.955;DP=592;FS=5.278;HRun=3;HaplotypeScore=60.9709;InbreedingCoeff=0.9984;MQ=85.82;MQ0=0;MQRankSum=-2.511;QD=24.20;ReadPosRankSum=3.721;VQSLOD=2.9419;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:25:47.05:357,47,0	0/0:12,0:12:33.09:0,33,455	0/0:17,0:17:51.17:0,51,721	0/0:23,0:23:39.22:0,39,723	0/0:15,0:16:42.09:0,42,542	0/0:30,0:30:87.26:0,87,1197	0/0:28,0:28:84.26:0,84,1165	1/1:21,0:21:20.18:141,20,0	0/0:17,0:17:48.16:0,48,686	0/0:21,0:21:57.18:0,57,790	0/0:10,0:10:24.55:0,25,339	0/0:22,0:22:66.16:0,66,891	0/0:19,0:19:51.16:0,51,712	0/0:12,0:12:36.12:0,36,518	1/1:2,28:30:72.23:892,72,0	0/0:26,0:26:75.24:0,75,1061	1/1:0,28:28:78.25:966,78,0	1/1:0,23:23:63.20:780,63,0	0/0:22,0:22:63.18:0,63,856	0/0:25,0:25:63.16:0,63,849	0/0:33,0:33:96.30:0,96,1337	0/0:11,0:11:30.09:0,30,403	0/0:19,0:19:45.11:0,45,583	0/0:18,0:18:54.17:0,54,759	1/1:5,19:24:42.13:519,42,0	0/0:23,0:23:69.19:0,69,922	0/0:20,0:20:60.18:0,60,837	0/0:17,0:17:51.16:0,51,715
chr10	3506936	.	GC	G	1404.36	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=13.467;DP=582;FS=0.000;HRun=4;HaplotypeScore=67.3293;InbreedingCoeff=0.9991;MQ=86.78;MQ0=0;MQRankSum=-1.098;QD=11.70;ReadPosRankSum=2.881;VQSLOD=1.2461;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:54.94:0,55,253	0/0:11,0:11:30.10:0,30,420	0/0:18,0:18:54.16:0,54,737	0/0:23,0:23:63.03:0,63,783	0/0:15,0:15:36.11:0,36,484	0/0:29,0:29:78.26:0,78,1087	0/0:29,0:29:84.26:0,84,1143	1/1:1,18:19:54.13:629,54,0	0/0:16,0:16:48.16:0,48,671	0/0:21,0:21:57.19:0,57,793	0/0:9,0:9:24.55:0,25,337	0/0:22,0:22:63.19:0,63,845	0/0:18,0:18:54.16:0,54,722	0/0:14,0:14:42.08:0,42,550	1/1:29,0:29:42.68:263,43,0	0/0:25,0:25:72.24:0,72,1008	1/1:29,0:29:48.30:281,48,0	1/1:24,0:24:35.22:224,35,0	0/0:24,0:24:66.19:0,66,874	0/0:22,0:22:60.16:0,60,788	0/0:34,0:34:96.25:0,96,1258	0/0:10,0:10:27.05:0,27,341	0/0:16,0:16:45.12:0,45,590	0/0:18,0:18:54.18:0,54,755	1/1:19,0:19:37.74:183,38,0	0/0:24,0:24:66.19:0,66,872	0/0:19,0:19:57.19:0,57,786	0/0:19,0:19:54.15:0,54,719
chr10	3507725	.	A	AAG	1956	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-8.709;DP=727;FS=7.172;HRun=0;HaplotypeScore=90.3365;InbreedingCoeff=0.9991;MQ=88.55;MQ0=0;MQRankSum=-3.071;QD=42.52;ReadPosRankSum=3.152;VQSLOD=5.4711;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,44:46:99:2051,117,0	0/0:13,0:13:33.10:0,33,432	0/0:38,0:37:85.44:0,85,1017	0/0:24,0:24:50.71:0,51,605	0/0:25,0:25:57.19:0,57,769	0/0:25,0:25:63.21:0,63,852	0/0:21,0:21:54.18:0,54,730	0/0:33,0:33:81.27:0,81,1095	0/0:26,0:26:75.18:0,75,962	0/0:32,0:32:87.28:0,87,1164	0/0:20,0:20:48.16:0,48,648	0/0:23,0:23:60.20:0,60,811	0/0:23,0:23:69.23:0,69,933	0/0:26,0:26:75.21:0,75,980	0/0:33,0:33:90.28:0,90,1191	0/0:24,0:24:60.18:0,60,771	0/0:25,0:25:63.19:0,63,823	0/0:14,0:14:33.11:0,33,446	0/0:17,0:17:48.16:0,48,649	0/0:33,0:33:93.27:0,93,1225	0/0:38,0:38:99:0,105,1393	0/0:35,0:35:96.30:0,96,1280	0/0:17,0:17:45.14:0,45,594	0/0:27,0:27:69.12:0,69,862	0/0:31,0:31:93.29:0,93,1240	0/0:16,0:16:39.13:0,39,527	0/0:31,0:31:87.28:0,87,1163	0/0:11,0:11:33.11:0,33,446
chr10	3508632	.	TTC	T	438.58	PASS	AB=0.990;AC=31;AF=0.674;AN=46;BaseQRankSum=2.990;DP=496;FS=20.604;HRun=0;HaplotypeScore=81.3250;InbreedingCoeff=0.2032;MQ=68.96;MQ0=8;MQRankSum=1.855;QD=1.42;ReadPosRankSum=2.492;VQSLOD=-0.5494;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:18,0:17:0:0,0,0	1/1:6,0:6:2.99:24,3,0	./.	./.	0/0:21,0:21:0.47:0,0,1	0/1:18,0:17:0.01:0,0,0	1/1:23,0:23:3.35:33,3,0	0/0:41,0:40:7.47:0,7,36	1/1:16,0:16:8.40:43,8,0	1/1:13,0:12:3.73:11,4,0	1/1:18,0:18:2.22:7,2,0	1/1:18,1:19:13.90:104,14,0	1/1:12,6:17:3.01:32,3,0	1/1:18,0:18:8.65:59,9,0	./.	0/1:19,1:19:17.90:26,0,18	1/1:15,0:15:2.84:14,3,0	./.	0/1:20,0:19:13.05:16,0,13	1/1:15,4:19:5.95:51,6,0	0/1:26,0:25:1.53:70,0,2	0/0:18,0:18:0.47:0,0,1	0/0:12,3:15:0:0,0,0	1/1:19,1:19:7.14:29,7,0	./.	0/0:17,0:17:0.89:0,1,3	1/1:11,0:11:2.39:11,2,0	1/1:9,0:9:2.74:12,3,0
chr10	3508675	.	TCTCA	T	1138.14	PASS	AB=0.969;AC=29;AF=0.518;AN=56;BaseQRankSum=4.812;DP=411;FS=0.000;HRun=0;HaplotypeScore=84.3196;InbreedingCoeff=-0.4090;MQ=49.60;MQ0=35;MQRankSum=0.494;QD=3.44;ReadPosRankSum=-2.987;VQSLOD=0.7797;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:18,0:15:0.02:0,0,0	1/1:3,0:3:5.30:26,5,0	0/0:17,0:1:2.97:0,3,20	0/0:31,0:11:6.61:0,7,104	0/1:10,0:10:8.92:9,0,83	0/1:10,0:8:50.98:55,0,51	0/1:18,0:17:8.60:9,0,72	1/1:14,0:11:27.12:180,27,0	0/1:9,0:9:54.61:61,0,55	0/1:17,0:14:82.86:83,0,143	0/1:10,3:13:14.82:15,0,121	0/1:17,0:17:58.83:134,0,59	0/1:13,0:12:5.41:5,0,40	0/1:18,0:17:49.87:50,0,86	0/0:18,0:17:0.15:0,0,0	0/0:14,0:13:8.17:0,8,113	1/1:10,0:9:15.25:97,15,0	1/1:5,0:2:3:26,3,0	0/1:12,1:10:68.66:69,0,157	0/1:11,0:11:31.44:31,0,137	0/1:29,1:26:99:110,0,172	0/1:11,0:11:51.43:51,0,55	0/1:12,0:12:9.33:9,0,37	0/1:21,10:27:60.90:61,0,118	1/1:10,0:10:1.89:24,2,0	0/1:14,1:13:83.86:88,0,84	0/1:15,0:14:67.49:67,0,108	0/1:8,0:5:28.06:28,0,57
chr10	3508677	.	TCA	T	990.02	PASS	AB=0.962;AC=31;AF=0.554;AN=56;BaseQRankSum=6.824;DP=413;FS=2.489;HRun=0;HaplotypeScore=76.5923;InbreedingCoeff=-0.3716;MQ=49.76;MQ0=36;MQRankSum=0.172;QD=2.73;ReadPosRankSum=-2.073;VQSLOD=1.5914;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:18,0:15:0.02:0,0,0	1/1:3,0:3:5.30:25,5,0	0/0:17,0:1:2.97:0,3,20	0/0:33,0:12:9.59:0,10,133	0/1:11,0:11:5.92:6,0,105	0/1:9,1:8:50.98:55,0,51	0/1:17,0:16:8.60:9,0,72	1/1:13,0:10:25.65:176,26,0	0/1:7,0:7:34.99:45,0,35	0/1:12,7:16:76.79:77,0,192	0/1:12,0:12:5.30:5,0,121	0/1:16,0:16:47.46:90,0,47	0/1:12,1:12:14.71:16,0,15	0/1:18,0:17:24.99:25,0,63	0/1:18,0:17:0.30:0,0,0	0/1:7,7:13:2.78:3,0,108	1/1:10,0:9:15.91:92,16,0	1/1:6,0:3:6:51,6,0	0/1:14,0:11:41.78:42,0,134	0/1:11,0:11:23.95:24,0,88	0/1:30,0:26:99:169,0,149	0/1:11,0:11:51.90:52,0,55	0/1:14,0:14:3.38:3,0,81	0/1:29,1:26:0.09:0,0,114	1/1:10,0:10:2.21:25,2,0	0/1:13,0:11:50.55:51,0,85	0/1:17,0:15:67.91:68,0,108	0/1:8,0:5:28.06:28,0,57
chr10	3508696	.	CCA	C	30.86	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=5.972;DP=436;FS=0.770;HRun=0;HaplotypeScore=82.1563;InbreedingCoeff=0.2551;MQ=49.53;MQ0=30;MQRankSum=-1.100;QD=0.28;ReadPosRankSum=-3.543;VQSLOD=0.9011;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,1:20:10.93:0,11,174	0/0:4,0:4:8.67:0,9,73	0/0:22,0:2:6.02:0,6,104	0/1:36,0:12:2.36:2,0,198	0/0:15,0:15:21.30:0,21,277	0/1:8,0:6:4.61:5,0,182	0/0:17,0:16:24.73:0,25,336	0/0:16,0:15:30.98:0,31,360	0/1:11,0:11:11.49:11,0,232	0/1:18,0:17:4.73:5,0,499	0/0:16,0:15:25.39:0,25,411	0/1:18,0:18:16.94:17,0,358	0/0:12,0:11:5.74:0,6,111	0/0:15,0:15:20.69:0,21,377	0/0:4,14:18:6.77:0,7,35	0/0:15,0:14:23.96:0,24,307	0/0:10,0:9:14.83:0,15,131	1/1:9,0:8:9.93:86,10,0	0/0:15,0:12:36.10:0,36,526	0/0:11,0:11:7.38:0,7,274	0/0:23,0:19:33.44:0,33,553	0/0:13,0:13:14.08:0,14,283	0/0:14,0:14:15.81:0,16,253	0/0:31,0:27:37.67:0,38,564	1/1:7,2:9:4.08:30,4,0	0/0:17,0:15:34.14:0,34,355	0/0:13,0:11:23.92:0,24,336	0/0:7,0:5:14.94:0,15,200
chr10	3508703	.	C	CGTGTGTGT	99.13	PASS	AB=1.000;AC=3;AF=0.060;AN=50;BaseQRankSum=0.527;DP=428;FS=0.000;HRun=0;HaplotypeScore=120.8297;InbreedingCoeff=0.2917;MQ=47.70;MQ0=28;MQRankSum=-3.024;QD=2.42;ReadPosRankSum=-2.357;VQSLOD=1.8321;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:19,4:22:6.02:178,6,0	0/0:7,0:7:9.03:0,9,193	./.	./.	0/0:15,0:16:8.66:0,9,203	0/0:9,0:7:9.03:0,9,204	0/0:17,0:16:9.03:0,9,186	./.	0/0:14,0:13:10.54:0,11,196	0/0:25,0:24:19.56:0,20,419	0/0:17,0:16:6.01:0,6,72	0/0:15,0:16:23.97:0,24,499	0/0:10,0:9:8.88:0,9,109	0/0:15,0:15:2.90:0,3,16	0/1:16,0:16:0.01:0,0,0	0/0:16,0:15:3.01:0,3,44	0/0:7,0:11:9.03:0,9,166	0/0:9,0:10:22.25:0,22,447	0/0:16,0:14:6.02:0,6,111	0/0:10,0:10:2.92:0,3,52	0/0:25,0:21:6.02:0,6,148	0/0:14,0:14:18.05:0,18,345	0/0:13,0:13:18.06:0,18,398	0/0:28,0:26:8.71:0,9,149	0/0:11,0:11:5.92:0,6,120	0/0:16,0:15:6.02:0,6,112	0/0:10,0:10:9.03:0,9,142	0/0:8,0:5:6.02:0,6,112
chr10	3510344	.	ACC	A	158.42	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.809;DP=767;FS=4.125;HRun=2;HaplotypeScore=92.5452;InbreedingCoeff=0.9934;MQ=79.18;MQ0=0;MQRankSum=-3.524;QD=10.56;ReadPosRankSum=-1.579;VQSLOD=0.1419;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,129,2533	0/0:7,0:7:21.07:0,21,426	0/0:19,0:19:44.93:0,45,898	0/0:16,0:16:43.34:0,43,769	0/0:19,0:19:57.14:0,57,1076	0/0:28,0:28:84.28:0,84,1652	0/0:25,0:25:75.26:0,75,1522	0/0:32,0:32:90.30:0,90,1758	0/0:36,0:36:99:0,108,2075	0/0:25,0:25:72.16:0,72,1392	0/0:22,0:22:66.19:0,66,1246	0/0:28,0:28:84.17:0,84,1521	0/0:36,0:36:99:0,108,2098	0/0:39,0:39:99:0,117,2239	0/0:32,0:32:96.29:0,96,1876	0/0:39,0:39:99:0,117,2172	1/1:2,13:15:29.83:253,30,0	0/0:9,0:9:24.08:0,24,486	0/0:23,0:23:69.21:0,69,1301	0/0:33,0:33:99:0,99,1895	0/0:49,0:49:99:0,141,2716	0/0:28,0:28:84.25:0,84,1634	0/0:25,0:25:75.17:0,75,1420	0/0:32,0:32:96.28:0,96,1837	0/0:32,0:32:96.28:0,96,1866	0/0:30,0:30:90.22:0,90,1698	0/0:30,0:30:90.28:0,90,1781	0/0:15,0:15:45.15:0,45,893
chr10	3510347	.	GCCAA	G	267.18	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.360;DP=771;FS=2.796;HRun=0;HaplotypeScore=123.4324;InbreedingCoeff=0.9975;MQ=79.57;MQ0=0;MQRankSum=-5.412;QD=19.08;ReadPosRankSum=-0.834;VQSLOD=3.3040;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,129,3717	0/0:9,0:9:27.09:0,27,780	0/0:18,0:18:54.19:0,54,1440	0/0:18,0:18:51.16:0,51,1415	0/0:18,0:18:54.19:0,54,1564	0/0:26,0:26:78.25:0,78,2139	0/0:25,0:25:75.24:0,75,2112	0/0:36,0:36:99:0,105,2784	0/0:35,0:35:99:0,105,2850	0/0:26,0:26:75.26:0,75,2158	0/0:22,0:22:66.21:0,66,1835	0/0:29,0:29:87.30:0,87,2521	0/0:35,0:35:99:0,105,3043	0/0:38,0:38:99:0,114,3109	0/0:33,0:33:99:0,99,2853	0/0:37,0:37:99:0,111,3014	1/1:1,13:14:30.47:362,30,0	0/0:10,0:10:27.09:0,27,755	0/0:23,0:23:69.24:0,69,1970	0/0:33,0:33:99:0,99,2869	0/0:54,0:54:99:0,163,4532	0/0:28,0:28:84.26:0,84,2242	0/0:23,0:23:69.24:0,69,1961	0/0:31,0:31:93.32:0,93,2673	0/0:33,0:33:99:0,99,2834	0/0:29,0:29:87.29:0,87,2443	0/0:30,0:30:90.28:0,90,2442	0/0:15,0:15:45.15:0,45,1304
chr10	3512396	.	CTGGTTTGGTT	C	549.01	PASS	AB=0.923;AC=3;AF=0.054;AN=56;BaseQRankSum=5.027;DP=615;FS=1.227;HRun=0;HaplotypeScore=172.1457;InbreedingCoeff=0.5114;MQ=69.49;MQ0=4;MQRankSum=-5.146;QD=14.84;ReadPosRankSum=-0.983;VQSLOD=2.6039;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:14,11:25:27.01:612,27,0	0/0:12,0:12:21.07:0,21,1035	0/0:33,0:23:6.02:0,6,181	0/0:38,0:20:4.83:0,5,74	0/0:17,0:17:36.12:0,36,1444	0/0:10,0:10:21.07:0,21,929	0/0:26,0:26:48.16:0,48,2372	0/0:29,0:28:39.13:0,39,1359	0/0:31,0:31:63.21:0,63,2760	0/0:22,0:22:48.16:0,48,1941	0/0:22,0:22:39.13:0,39,1738	0/1:11,0:12:42.77:43,0,1158	0/0:28,0:28:54.19:0,54,2509	0/0:26,0:26:51.18:0,51,2305	0/0:27,0:30:42.14:0,42,1916	0/0:23,0:23:45.14:0,45,2050	0/0:32,0:32:63.19:0,63,2839	0/0:12,0:12:21.07:0,21,856	0/0:13,0:13:6.91:0,7,300	0/0:18,0:18:36.12:0,36,1610	0/0:25,0:25:39.12:0,39,1815	0/0:15,0:15:30.10:0,30,1423	0/0:17,0:17:27.09:0,27,1342	0/0:31,0:31:66.23:0,66,2857	0/0:16,0:21:41.35:0,41,1578	0/0:18,0:18:45.15:0,45,2169	0/0:17,0:17:39.13:0,39,1857	0/0:12,0:12:15.05:0,15,746
chr10	3513475	.	TG	T	2796.10	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=11.864;DP=1070;FS=0.445;HRun=1;HaplotypeScore=144.2027;InbreedingCoeff=1.0000;MQ=59.21;MQ0=1;MQRankSum=0.604;QD=32.51;ReadPosRankSum=3.510;VQSLOD=3.3795;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,43:48:52.88:1500,53,0	0/0:22,0:22:66.18:0,66,1007	0/0:54,0:52:99:0,154,2283	0/0:49,0:47:99:0,126,1886	0/0:37,0:37:87.28:0,87,1358	0/0:37,0:37:92.16:0,92,1455	0/0:40,0:40:99:0,99,1553	0/0:35,0:35:99:0,105,1644	0/0:48,0:48:99:0,132,2096	0/0:61,0:61:99:0,181,2849	0/0:27,0:27:60.20:0,60,947	0/0:38,0:38:99:0,114,1753	0/0:41,0:41:99:0,120,1904	0/0:28,0:28:78.27:0,78,1229	0/0:60,0:60:99:0,160,2491	0/0:41,0:41:99:0,120,1885	1/1:2,36:37:99:1418,103,0	0/0:26,0:26:63.20:0,63,968	0/0:16,0:16:48.11:0,48,675	0/0:34,0:34:99:0,99,1561	0/0:56,0:56:99:0,163,2541	0/0:42,0:42:99:0,105,1653	0/0:32,0:32:90.30:0,90,1404	0/0:38,0:38:99:0,111,1734	0/0:26,0:26:42.14:0,42,651	0/0:40,0:40:99:0,117,1759	0/0:30,0:30:75.26:0,75,1197	0/0:26,0:26:69.23:0,69,1060
chr10	3514357	.	GGAGA	G	938.32	PASS	AB=0.922;AC=5;AF=0.089;AN=56;BaseQRankSum=3.657;DP=787;FS=20.822;HRun=0;HaplotypeScore=157.2933;InbreedingCoeff=0.3642;MQ=61.38;MQ0=13;MQRankSum=-3.230;QD=7.75;ReadPosRankSum=-3.910;VQSLOD=0.6692;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:12.03:0,12,176	0/0:14,0:18:35.63:0,36,655	0/0:35,0:18:7.02:0,7,318	0/0:41,0:30:32.72:0,33,498	0/0:18,0:16:38.85:0,39,839	0/0:21,0:22:36.01:0,36,772	0/0:32,0:35:71.96:0,72,1568	1/1:14,24:38:18.76:1023,19,0	0/0:27,0:29:59.93:0,60,1267	0/0:34,0:36:70.43:0,70,1570	0/0:23,0:23:49.98:0,50,1100	0/0:26,0:28:53.75:0,54,1183	0/0:30,0:29:54.08:0,54,1231	0/0:34,0:34:68.95:0,69,1457	0/0:34,0:33:71.76:0,72,953	0/0:27,0:31:68.76:0,69,1520	0/0:20,0:16:12.03:0,12,177	0/0:17,0:16:18.06:0,18,297	0/1:11,0:14:14.40:14,0,473	0/0:35,0:35:78.25:0,78,1666	0/1:31,1:30:1.53:2,0,966	0/0:37,0:38:68.97:0,69,1581	0/0:25,0:25:51.16:0,51,1111	0/0:27,0:27:59.57:0,60,1316	0/0:18,0:17:12.04:0,12,175	0/1:35,1:34:6.53:7,0,1818	0/0:33,0:33:68.54:0,69,1365	0/0:15,0:14:20.90:0,21,448
chr10	3514363	.	A	AGAGAGG	3950.35	PASS	AB=0.550;AC=9;AF=0.161;AN=56;BaseQRankSum=0.099;DP=802;FS=15.679;HRun=0;HaplotypeScore=172.7512;InbreedingCoeff=0.8013;MQ=62.20;MQ0=13;MQRankSum=-8.544;QD=32.12;ReadPosRankSum=0.725;VQSLOD=2.2067;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,23:28:12.04:412,12,0	0/0:19,0:19:47.93:0,48,666	0/0:39,0:19:16.53:0,17,403	0/0:43,0:31:43.42:0,43,568	0/0:19,0:17:39.12:0,39,813	0/0:22,0:22:23.15:0,23,694	0/0:30,0:30:75.10:0,75,1401	0/0:39,0:38:87.31:0,87,970	0/0:29,0:29:81.11:0,81,1332	0/0:40,0:39:99:0,114,1901	0/0:25,0:25:54.16:0,54,1062	0/0:31,0:31:68.04:0,68,1266	0/0:30,0:29:66.09:0,66,1254	0/0:32,0:32:78.16:0,78,1440	1/1:2,31:34:66.21:2194,66,0	0/0:32,0:32:78.20:0,78,1549	0/1:4,15:18:0.78:398,0,1	1/1:2,14:20:2.73:559,3,0	0/0:13,0:13:36:0,36,544	0/0:33,0:33:93.09:0,93,1594	0/0:27,0:25:57.06:0,57,1101	0/0:39,0:38:84.16:0,84,1563	0/0:25,0:25:69.04:0,69,1069	0/0:27,0:27:68.90:0,69,1298	1/1:4,13:16:0.59:388,1,0	0/0:40,0:38:99:0,105,1955	0/0:31,0:31:78.09:0,78,1366	0/0:14,0:13:24:0,24,412
chr10	3515164	.	TTA	T	3209.44	PASS	AB=0.585;AC=9;AF=0.161;AN=56;BaseQRankSum=10.121;DP=613;FS=7.897;HRun=0;HaplotypeScore=73.4421;InbreedingCoeff=0.8623;MQ=84.33;MQ0=3;MQRankSum=-3.103;QD=26.09;ReadPosRankSum=4.234;VQSLOD=4.4417;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,28:33:75.24:976,75,0	0/0:8,0:8:21.07:0,21,350	0/0:24,0:24:51.15:0,51,833	0/0:17,0:17:29.47:0,29,476	0/0:29,0:28:81.26:0,81,1350	0/0:20,0:20:54.17:0,54,887	0/0:12,0:12:33.11:0,33,559	0/0:36,0:36:93.31:0,93,1540	0/0:25,0:25:72.23:0,72,1198	0/0:19,0:19:48.16:0,48,817	0/0:24,0:24:69.21:0,69,1122	0/0:26,0:26:66.19:0,66,1068	0/0:18,0:18:48.14:0,48,786	0/0:24,0:24:51.17:0,51,852	1/1:2,19:21:48.16:624,48,0	0/0:25,0:25:72.25:0,72,1210	0/1:7,17:23:47.59:570,0,48	1/1:4,20:23:45.15:585,45,0	0/0:19,0:19:54.18:0,54,919	0/0:25,0:25:66.21:0,66,1092	0/0:12,0:12:24.08:0,24,408	0/0:23,0:23:66.23:0,66,1115	0/0:30,0:30:75.26:0,75,1272	0/0:12,0:12:30.10:0,30,510	1/1:2,18:20:48.15:619,48,0	0/0:20,0:20:51.16:0,51,836	0/0:36,0:36:99:0,108,1748	0/0:6,0:6:15.05:0,15,255
chr10	3515753	.	GTC	G	433.93	PASS	AB=0.915;AC=15;AF=0.278;AN=54;BaseQRankSum=7.604;DP=770;FS=30.220;HRun=0;HaplotypeScore=104.4445;InbreedingCoeff=-0.3876;MQ=34.52;MQ0=125;MQRankSum=-4.987;QD=1.36;ReadPosRankSum=-1.195;VQSLOD=0.0179;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:28,1:24:43.01:43,0,264	0/1:6,1:6:2.79:3,0,146	0/0:103,0:6:11.36:0,11,157	0/0:102,0:5:5.22:0,5,33	0/1:11,1:10:2.92:3,0,252	0/0:11,3:14:14.82:0,15,273	0/0:27,3:22:2.38:0,2,333	0/0:51,1:29:26.79:0,27,1102	0/1:19,0:12:11.78:12,0,177	0/1:33,3:20:68.82:69,0,639	0/0:11,0:10:14.43:0,14,218	0/1:17,3:15:63.19:63,0,213	0/1:14,3:14:60.29:60,0,226	0/1:14,4:16:25.67:26,0,266	0/1:11,0:10:11.58:12,0,66	0/1:10,2:10:67.16:67,0,114	./.	0/1:12,0:8:7.51:8,0,70	0/0:34,1:16:35.85:0,36,540	0/0:24,0:16:16.71:0,17,212	0/1:77,5:62:31.27:31,0,798	0/0:15,1:15:30.06:0,30,444	0/0:12,2:11:9.42:0,9,125	0/0:33,1:25:29.22:0,29,539	0/0:8,1:7:6.02:0,6,97	0/1:24,1:13:84.89:85,0,187	0/1:7,4:8:21.48:21,0,47	0/1:7,0:6:30.85:77,0,31
chr10	3515776	.	C	CTG	245.04	PASS	AB=0.954;AC=13;AF=0.232;AN=56;BaseQRankSum=7.833;DP=977;FS=40.766;HRun=0;HaplotypeScore=150.2195;InbreedingCoeff=0.0078;MQ=34.51;MQ0=140;MQRankSum=-6.329;QD=0.87;ReadPosRankSum=-2.004;VQSLOD=1.0806;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:40,1:35:1:1,0,262	0/1:8,1:7:35.57:36,0,100	0/0:104,0:5:3.48:0,3,34	0/0:124,0:6:8.67:0,9,49	0/0:20,1:15:12.03:0,12,134	0/0:23,0:22:17.97:0,18,278	0/1:48,1:38:38.29:38,0,277	0/0:49,0:28:26.99:0,27,269	0/0:21,0:15:18.52:0,19,223	0/0:43,2:25:13.02:0,13,265	0/0:13,0:12:19.59:0,20,208	0/1:33,1:25:7.04:7,0,292	0/1:27,1:23:21:21,0,284	0/0:24,0:22:25.63:0,26,273	1/1:13,0:11:7.67:53,8,0	0/0:20,0:17:3.79:0,4,185	0/0:9,0:5:2.59:0,3,25	0/1:15,0:10:22.11:22,0,39	0/1:36,1:13:72.97:73,0,94	0/0:25,1:18:19.78:0,20,225	0/0:106,2:81:70.16:0,70,871	0/0:30,0:21:24.05:0,24,273	0/0:19,0:16:17.41:0,17,195	0/0:42,0:29:29.95:0,30,362	0/0:13,0:10:5.69:0,6,48	0/1:34,2:20:28.96:29,0,207	1/1:12,1:10:5.85:59,6,0	0/1:6,1:7:15.99:54,0,16
chr10	3515799	.	GTGT	G	267.16	PASS	AB=0.724;AC=1;AF=0.018;AN=56;BaseQRankSum=4.404;DP=1079;FS=3.428;HRun=0;HaplotypeScore=170.7866;InbreedingCoeff=-0.0289;MQ=32.88;MQ0=157;MQRankSum=-3.111;QD=6.36;ReadPosRankSum=1.088;VQSLOD=3.0677;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:26,15:38:88.98:342,0,89	0/0:11,0:9:18.93:0,19,297	0/0:102,0:4:12.04:0,12,219	0/0:122,0:5:14.72:0,15,270	0/0:27,0:20:23.96:0,24,393	0/0:32,0:30:33.32:0,33,735	0/0:62,0:51:73.87:0,74,1190	0/0:57,0:31:56.02:0,56,638	0/0:21,0:16:37.94:0,38,723	0/0:53,0:29:48.80:0,49,884	0/0:23,0:22:26.77:0,27,567	0/0:28,0:21:42.14:0,42,877	0/0:33,0:29:62.53:0,63,1102	0/0:26,0:23:41.72:0,42,765	0/0:16,0:12:9.86:0,10,101	0/0:24,0:23:15.67:0,16,503	0/0:10,0:7:8.72:0,9,84	0/0:16,0:9:10.71:0,11,217	0/0:27,0:9:23.75:0,24,329	0/0:24,0:20:29.90:0,30,630	0/0:121,0:91:99:0,109,2048	0/0:36,0:26:32.86:0,33,590	0/0:26,0:23:23.80:0,24,485	0/0:52,0:37:41.31:0,41,854	0/0:24,0:16:11.25:0,11,124	0/0:34,0:21:44.21:0,44,632	0/0:16,0:14:18.14:0,18,280	0/0:12,0:11:12.74:0,13,310
chr10	3515849	.	GGT	G	299.75	PASS	AB=0.871;AC=6;AF=0.111;AN=54;BaseQRankSum=6.128;DP=1003;FS=6.726;HRun=0;HaplotypeScore=139.3417;InbreedingCoeff=0.2155;MQ=37.88;MQ0=144;MQRankSum=-3.246;QD=2.88;ReadPosRankSum=2.299;VQSLOD=1.9390;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:27:74.29:181,0,74	0/0:18,0:17:20.29:0,20,418	./.	0/0:114,0:7:12.01:0,12,147	0/1:26,2:25:4.45:4,0,387	0/0:21,0:18:23.97:0,24,342	0/0:53,0:51:75.23:0,75,1218	0/0:39,0:23:30.08:0,30,398	0/0:20,0:15:24.06:0,24,341	0/0:41,0:29:42.09:0,42,742	0/0:20,0:19:23.99:0,24,325	0/0:27,1:23:42.11:0,42,610	0/0:26,0:22:48.62:0,49,725	0/0:30,0:28:45.12:0,45,644	1/1:12,1:10:4.24:41,4,0	0/0:21,0:18:19.75:0,20,325	0/0:8,0:7:12.92:0,13,138	0/1:6,4:7:7.26:98,0,7	0/0:26,0:6:10.92:0,11,106	0/0:20,0:18:38.60:0,39,529	0/0:131,2:101:99:0,169,2522	0/0:38,0:33:63.13:0,63,947	0/0:23,0:23:20.96:0,21,292	0/0:58,1:49:43.46:0,43,948	0/1:15,4:17:26.20:90,0,26	0/0:32,0:22:30.63:0,31,481	0/0:13,0:12:18.06:0,18,266	0/0:7,0:6:15.05:0,15,235
chr10	3515869	.	C	CTGTG	399.76	PASS	AB=0.987;AC=7;AF=0.135;AN=52;BaseQRankSum=5.841;DP=991;FS=7.997;HRun=0;HaplotypeScore=151.6519;InbreedingCoeff=0.4436;MQ=40.74;MQ0=94;MQRankSum=-3.037;QD=3.28;ReadPosRankSum=-5.127;VQSLOD=0.0527;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:20,0:19:24.91:25,0,27	0/0:17,0:15:19.78:0,20,355	./.	0/0:121,0:7:6.93:0,7,54	0/0:28,0:26:12.10:0,12,413	0/0:24,0:21:44.88:0,45,623	0/0:40,0:37:11.60:0,12,678	0/1:49,0:29:5.17:5,0,657	0/1:18,0:13:0.85:1,0,283	0/0:44,0:35:50.60:0,51,917	0/0:23,0:20:9.97:0,10,347	0/0:31,0:27:38.07:0,38,609	0/0:26,0:22:39.11:0,39,612	0/0:34,0:32:24.89:0,25,616	./.	0/0:16,0:15:15.04:0,15,232	0/0:8,0:7:15.05:0,15,253	1/1:8,4:9:15.01:270,15,0	0/0:31,0:10:21.07:0,21,346	0/0:22,0:21:38.84:0,39,581	0/0:138,1:107:99:0,170,2632	0/0:37,0:34:57.16:0,57,893	0/0:17,0:17:11.53:0,12,194	0/0:48,1:44:62.99:0,63,958	1/1:17,1:18:20.50:225,20,0	0/0:27,0:18:4.94:0,5,318	0/0:16,0:15:18.04:0,18,268	0/0:11,0:9:1.23:0,1,141
chr10	3515894	.	GTGTGTGTGA	G	169.11	PASS	AB=0.961;AC=8;AF=0.143;AN=56;BaseQRankSum=6.580;DP=918;FS=13.651;HRun=0;HaplotypeScore=181.4191;InbreedingCoeff=0.3543;MQ=40.80;MQ0=124;MQRankSum=-6.393;QD=1.21;ReadPosRankSum=-4.239;VQSLOD=0.8175;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:18:9.31:33,9,0	0/0:14,0:13:14.97:0,15,1055	0/0:89,0:3:9.01:0,9,112	0/0:118,0:3:2.60:0,3,10	0/0:21,0:19:21.07:0,21,800	0/0:24,0:22:42.04:0,42,1727	0/0:41,0:36:56.92:0,57,1862	0/1:51,0:26:16.48:16,0,717	0/0:19,0:16:36.07:0,36,1232	0/0:37,0:30:66.23:0,66,2493	0/0:21,0:16:27.09:0,27,1010	0/0:23,0:20:36.12:0,36,1285	0/0:22,0:21:40.38:0,40,1731	0/0:28,0:26:57.10:0,57,1949	0/0:17,1:13:5.50:0,5,331	0/0:18,0:16:33.11:0,33,1156	1/1:8,0:7:12.04:175,12,0	0/1:15,1:13:61.19:61,0,546	0/0:26,0:12:33.11:0,33,1226	0/0:22,0:22:42.14:0,42,1610	0/0:123,0:96:99:0,175,6534	0/0:32,0:31:57.19:0,57,2138	0/0:13,0:13:24.08:0,24,713	0/0:45,0:38:60.03:0,60,2195	0/1:17,2:18:12.54:13,0,644	0/1:21,0:13:5.86:6,0,606	0/0:13,0:11:18.06:0,18,691	0/0:11,0:10:21.07:0,21,699
chr10	3515896	.	GTGTGTGA	G	223.68	PASS	AB=0.974;AC=9;AF=0.161;AN=56;BaseQRankSum=7.057;DP=897;FS=3.340;HRun=0;HaplotypeScore=161.9844;InbreedingCoeff=0.2990;MQ=41.17;MQ0=119;MQRankSum=-6.557;QD=1.45;ReadPosRankSum=-4.251;VQSLOD=1.6241;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:16:9.13:43,9,0	0/1:13,1:13:8.31:8,0,901	0/0:89,0:3:9.01:0,9,121	0/0:114,0:4:4.56:0,5,51	0/0:18,0:17:21.07:0,21,768	0/0:24,0:22:42.08:0,42,1509	0/0:41,2:38:59.21:0,59,1829	0/1:49,0:24:40.12:40,0,801	0/0:18,0:16:35.96:0,36,1160	0/0:36,0:29:66.23:0,66,2278	0/0:20,0:15:27.09:0,27,866	0/0:22,0:20:36.12:0,36,1217	0/0:20,0:19:40.38:0,40,1511	0/0:26,0:24:57.19:0,57,1846	0/0:19,0:13:11.40:0,11,334	0/0:18,0:16:33.11:0,33,1036	1/1:6,2:7:12.04:229,12,0	0/1:17,0:14:25:25,0,588	0/0:25,0:12:33.11:0,33,1095	0/0:21,0:21:42.14:0,42,1486	0/0:117,1:93:99:0,178,5914	0/0:31,0:30:57.02:0,57,1879	0/0:13,0:13:24.08:0,24,665	0/0:43,0:36:60.02:0,60,1910	0/1:20,0:19:12.50:13,0,691	0/1:21,0:13:6.19:6,0,566	0/0:14,0:12:20.97:0,21,670	0/0:10,0:9:20.99:0,21,568
chr10	3515935	.	ATG	A	100.74	PASS	AC=2;AF=0.037;AN=54;BaseQRankSum=5.417;DP=902;FS=4.227;HRun=0;HaplotypeScore=134.8683;InbreedingCoeff=0.7244;MQ=41.32;MQ0=116;MQRankSum=-4.668;QD=4.03;ReadPosRankSum=-2.595;VQSLOD=2.3726;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:17,8:18:20.34:192,20,0	0/0:7,0:7:10.96:0,11,236	./.	0/0:98,1:2:2.74:0,3,12	0/0:19,0:19:40.76:0,41,646	0/0:16,0:16:36.11:0,36,560	0/0:50,0:47:87.88:0,88,1558	0/0:46,0:31:46.26:0,46,697	0/0:22,0:22:51.06:0,51,791	0/0:39,0:32:69.04:0,69,1061	0/0:14,0:14:32.14:0,32,511	0/0:30,0:29:60.14:0,60,960	0/0:29,0:26:75.19:0,75,1190	0/0:21,0:19:42.11:0,42,609	0/0:39,0:32:45.12:0,45,681	0/0:21,0:19:48.16:0,48,753	0/0:6,0:5:4.04:0,4,25	0/0:22,0:19:40.69:0,41,705	0/0:22,0:10:24.04:0,24,374	0/0:24,0:22:57.02:0,57,900	0/0:103,1:85:99:0,127,2598	0/0:21,0:19:48.16:0,48,797	0/0:15,0:12:27.09:0,27,455	0/0:41,0:36:65.66:0,66,1021	0/0:33,0:29:56.67:0,57,879	0/0:19,0:13:23.81:0,24,321	0/0:10,0:9:18.06:0,18,296	0/0:7,0:8:21.07:0,21,346
chr10	3515952	.	C	CTG	665.84	PASS	AB=0.927;AC=7;AF=0.135;AN=52;BaseQRankSum=-0.079;DP=1011;FS=0.000;HRun=0;HaplotypeScore=171.3773;InbreedingCoeff=0.4647;MQ=40.70;MQ0=114;MQRankSum=-4.507;QD=6.66;ReadPosRankSum=-3.341;VQSLOD=2.1993;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:26:24.78:0,25,165	0/0:11,0:10:9.01:0,9,95	./.	./.	0/0:27,0:27:47.91:0,48,543	0/0:22,0:21:27.08:0,27,324	0/0:59,0:54:81.57:0,82,901	0/1:39,3:26:99:208,0,114	0/0:21,0:21:42.01:0,42,490	0/0:47,0:37:48.44:0,48,659	0/0:21,0:19:26.76:0,27,322	0/0:37,0:34:50.11:0,50,818	0/0:34,0:30:63.19:0,63,748	0/0:23,0:20:28.33:0,28,334	0/0:34,0:27:35.69:0,36,383	0/0:25,0:23:50.34:0,50,544	0/1:8,0:7:21.23:21,0,63	0/0:20,0:19:41.89:0,42,465	0/0:26,0:12:29.84:0,30,307	0/0:26,0:23:53.53:0,54,617	0/0:112,1:98:98.42:0,98,1611	0/0:30,0:25:44.70:0,45,519	0/0:19,0:16:26.80:0,27,292	0/0:46,0:41:65.56:0,66,728	0/0:33,0:28:34.85:0,35,351	0/1:23,5:23:55.55:277,0,56	1/1:10,2:11:12.03:169,12,0	1/1:10,0:10:11.62:124,12,0
chr10	3516004	.	GTGGTGTC	G	938.27	PASS	AB=0.905;AC=5;AF=0.089;AN=56;BaseQRankSum=7.708;DP=1077;FS=7.096;HRun=0;HaplotypeScore=245.8062;InbreedingCoeff=0.1895;MQ=46.14;MQ0=67;MQRankSum=-6.785;QD=7.82;ReadPosRankSum=-2.046;VQSLOD=1.4871;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:54,0:46:39.57:40,0,1118	0/0:10,0:10:30.10:0,30,960	0/0:80,0:13:39.11:0,39,883	0/0:110,0:23:50.67:0,51,798	0/0:27,0:24:51.04:0,51,1510	0/0:23,0:22:51.47:0,51,1672	0/0:55,0:52:99:0,129,4501	0/0:48,0:42:80.22:0,80,2814	0/0:24,0:23:63.67:0,64,2029	0/0:39,0:33:72.70:0,73,2415	0/0:20,0:20:43.92:0,44,1224	0/0:44,0:40:99:0,105,3387	0/0:37,0:35:93.30:0,93,2938	0/0:31,0:29:67.28:0,67,2182	0/1:33,4:32:22.68:535,0,23	0/0:29,0:28:66.19:0,66,2257	0/0:24,0:21:25.73:0,26,927	0/1:10,3:11:23.02:346,0,23	0/0:23,0:10:23.62:0,24,433	0/0:30,0:25:48.25:0,48,1610	0/0:122,0:110:99:0,250,7927	0/0:36,0:35:71.84:0,72,2440	0/0:15,0:13:27.09:0,27,822	0/0:71,0:68:99:0,153,5101	1/1:15,1:12:1.43:128,1,0	0/0:34,1:32:81.28:0,81,2441	0/0:14,0:14:33.09:0,33,1240	0/0:7,0:6:17.89:0,18,503
chr10	3516005	.	TG	T	435.41	PASS	AB=0.722;AC=5;AF=0.089;AN=56;BaseQRankSum=9.001;DP=1062;FS=5.606;HRun=2;HaplotypeScore=167.6367;InbreedingCoeff=0.6960;MQ=46.45;MQ0=66;MQRankSum=-6.405;QD=6.80;ReadPosRankSum=-2.472;VQSLOD=-0.1288;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:53,1:46:25.76:0,26,798	0/0:10,0:10:30.07:0,30,415	0/0:81,0:15:39.12:0,39,520	0/0:107,2:23:41.36:0,41,488	0/0:25,0:22:50.81:0,51,697	0/0:22,0:22:49.88:0,50,682	0/0:56,0:53:99:0,131,1882	0/0:43,1:42:86.64:0,87,1368	0/0:24,0:23:63.63:0,64,883	0/0:36,3:33:72.64:0,73,1107	0/0:20,0:20:43.83:0,44,560	0/0:43,0:39:99:0,103,1439	0/0:36,0:35:91.75:0,92,1254	0/0:32,0:30:72.18:0,72,1006	1/1:20,15:30:13.78:321,14,0	0/0:26,0:25:69.14:0,69,954	0/0:22,1:20:9.32:0,9,532	0/1:8,5:11:13.97:131,0,14	0/0:23,1:11:26.83:0,27,338	0/0:28,2:25:42.05:0,42,720	0/0:117,4:108:99:0,248,3529	0/0:36,0:35:69.05:0,69,1001	0/0:15,0:13:27.09:0,27,389	0/0:71,0:67:99:0,152,2111	1/1:8,8:12:5.31:99,5,0	0/0:34,1:32:81.27:0,81,1162	0/0:14,0:14:33.11:0,33,489	0/0:6,1:6:17.55:0,18,233
chr10	3516370	.	CTT	C	1512.92	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.343;DP=656;FS=41.357;HRun=3;HaplotypeScore=76.3896;InbreedingCoeff=0.9963;MQ=72.59;MQ0=0;MQRankSum=-2.222;QD=36.90;ReadPosRankSum=1.064;VQSLOD=1.2634;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,41:41:99:1608,105,0	0/0:8,0:8:24.08:0,24,464	0/0:37,0:34:99:0,99,1837	0/0:33,0:30:81.27:0,81,1462	0/0:20,0:20:54.18:0,54,1005	0/0:14,0:14:42.10:0,42,774	0/0:20,0:20:60.21:0,60,1133	0/0:23,0:23:63.20:0,63,1144	0/0:28,0:28:84.29:0,84,1621	0/0:21,0:21:63.22:0,63,1211	0/0:16,0:16:48.16:0,48,922	0/0:33,0:33:96.33:0,96,1853	0/0:18,0:18:54.19:0,54,1036	0/0:33,0:33:99:0,99,1894	0/0:18,0:18:54.19:0,54,1043	0/0:26,0:26:78.25:0,78,1463	0/0:31,0:31:93.28:0,93,1714	0/0:14,0:14:42.14:0,42,803	0/0:18,0:18:48.15:0,48,895	0/0:17,0:17:48.16:0,48,921	0/0:34,0:34:93.32:0,93,1784	0/0:9,0:9:27.09:0,27,522	0/0:15,0:15:39.13:0,39,754	0/0:41,0:41:99:0,123,2334	0/0:20,0:19:54.14:0,54,987	0/0:20,0:20:60.21:0,60,1160	0/0:38,0:38:99:0,111,2118	0/0:10,0:10:30.10:0,30,580
chr10	3516830	.	T	TAA	2221.09	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=1.078;DP=653;FS=3.947;HRun=10;HaplotypeScore=91.4010;InbreedingCoeff=0.9300;MQ=72.22;MQ0=1;MQRankSum=-0.645;QD=23.38;ReadPosRankSum=-3.256;VQSLOD=2.7983;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:40:98.27:0,98,964	0/0:14,0:14:33.02:0,33,336	0/0:22,0:19:4:0,4,164	0/0:16,0:13:13.25:0,13,133	0/0:18,0:18:7.27:0,7,438	0/0:30,0:30:72.14:0,72,732	0/0:23,0:23:57.07:0,57,564	1/1:2,0:27:33.53:232,34,0	0/0:19,0:20:50.85:0,51,500	0/0:25,0:26:62.80:0,63,679	0/0:16,0:17:47.82:0,48,459	0/0:21,0:21:54.06:0,54,540	0/0:39,0:39:89.92:0,90,898	0/0:16,0:17:41.79:0,42,402	1/1:10,15:26:66.17:934,66,0	0/0:27,0:27:72.13:0,72,732	0/0:27,0:28:65.86:0,66,653	1/1:2,12:14:33.11:493,33,0	0/0:16,0:16:42.09:0,42,427	0/0:24,0:26:53.54:0,54,576	0/0:18,0:18:45.07:0,45,458	0/0:25,0:28:68.56:0,69,659	0/0:23,0:23:60.11:0,60,610	0/0:25,0:27:62.56:0,63,662	1/1:11,14:27:55.64:723,56,0	0/0:24,0:25:59.78:0,60,581	0/0:28,0:28:78.14:0,78,788	0/0:8,0:8:18.03:0,18,183
chr10	3516912	.	AAAGAG	A	3193.24	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=10.777;DP=656;FS=0.000;HRun=0;HaplotypeScore=132.0928;InbreedingCoeff=0.9855;MQ=74.40;MQ0=0;MQRankSum=-11.957;QD=35.09;ReadPosRankSum=1.260;VQSLOD=3.4163;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,20:24:33.11:649,33,0	0/0:15,0:15:33.11:0,33,934	0/0:27,0:25:69.05:0,69,1470	0/0:53,0:44:86.60:0,87,2077	0/0:43,0:43:99:0,114,3274	0/0:23,0:23:66.23:0,66,1869	0/0:24,0:24:69.14:0,69,1761	0/0:32,0:32:52.35:0,52,1368	0/0:15,0:15:42.14:0,42,1234	0/0:28,0:28:75.25:0,75,2093	0/0:22,0:22:60.20:0,60,1688	0/0:26,0:26:63.22:0,63,1784	0/0:28,0:28:66.20:0,66,1780	0/0:17,0:17:45.15:0,45,1329	1/1:3,20:23:57.20:1125,57,0	0/0:26,0:26:69.23:0,69,1962	1/1:2,16:19:24.31:526,24,0	1/1:2,2:4:9.03:176,9,0	0/0:23,0:23:63.18:0,63,1593	0/0:18,0:18:51.18:0,51,1464	0/0:16,0:16:45.15:0,45,1321	0/0:22,0:22:60.21:0,60,1747	0/0:23,0:23:57.20:0,57,1683	0/0:24,0:24:57.15:0,57,1593	1/1:1,20:21:45.15:888,45,0	0/0:22,0:22:60.19:0,60,1586	0/0:29,0:28:78.27:0,78,2244	0/0:9,0:9:27.09:0,27,804
chr10	3520393	.	TGCTGTGGCTGTG	T	1599.93	PASS	AC=6;AF=0.111;AN=54;BaseQRankSum=6.015;DP=351;FS=2.240;HRun=0;HaplotypeScore=116.6333;InbreedingCoeff=0.7266;MQ=99.46;MQ0=0;MQRankSum=-5.956;QD=41.02;ReadPosRankSum=0.811;VQSLOD=3.0956;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:7,13:20:18.06:646,18,0	0/0:3,0:3:6.02:0,6,209	0/0:22,0:21:42.14:0,42,1933	0/0:32,0:32:54.12:0,54,2701	0/0:4,0:4:3.01:0,3,69	0/0:11,0:11:24.08:0,24,1055	0/0:16,0:16:39.13:0,39,2129	0/0:30,0:30:60.21:0,60,2714	0/0:17,0:17:48.16:0,48,2218	0/0:7,0:7:12.04:0,12,401	0/0:7,0:7:15.05:0,15,604	0/0:27,0:27:69.24:0,69,3644	0/0:7,0:7:18.06:0,18,1049	0/0:17,0:17:48.16:0,48,2624	1/1:3,9:12:24.08:867,24,0	0/0:12,0:12:33.11:0,33,1724	0/0:23,0:23:60.19:0,60,3201	1/1:3,4:7:6.02:217,6,0	0/0:9,0:9:15.05:0,15,646	0/0:3,0:3:3.01:0,3,120	0/0:10,0:10:15.03:0,15,618	0/0:2,0:2:3.01:0,3,69	0/0:5,0:5:12.04:0,12,534	0/0:17,0:17:45.15:0,45,2308	./.	0/0:8,0:8:12.04:0,12,445	0/0:12,0:12:33.11:0,33,1792	0/0:9,0:9:18.06:0,18,670
chr10	3520677	.	TA	T	847.41	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=7.367;DP=498;FS=7.894;HRun=10;HaplotypeScore=48.4059;InbreedingCoeff=0.7119;MQ=66.99;MQ0=1;MQRankSum=1.332;QD=15.41;ReadPosRankSum=-2.088;VQSLOD=2.7940;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,18:21:47.76:416,48,0	0/0:7,0:7:18.04:0,18,192	0/0:10,0:9:20.97:0,21,216	0/1:6,0:5:12.14:12,0,70	0/0:24,0:24:37.66:0,38,584	0/0:17,0:17:42.11:0,42,465	0/0:8,0:8:18.05:0,18,199	1/1:7,21:28:62.97:547,63,0	0/0:15,0:15:42.09:0,42,454	0/0:32,1:33:55.15:0,55,831	0/0:28,0:29:84.06:0,84,910	0/0:12,0:12:33.09:0,33,365	0/0:12,1:13:13.05:0,13,372	0/0:18,0:18:48.09:0,48,506	0/0:14,0:14:33.09:0,33,365	0/0:12,1:13:4.02:0,4,273	0/0:14,1:15:19.08:0,19,439	0/0:22,2:24:40.13:0,40,671	0/0:19,0:19:45.12:0,45,498	0/0:33,0:33:90.24:0,90,995	0/0:6,0:6:15.04:0,15,166	0/0:16,0:16:45.12:0,45,498	0/0:23,0:23:66.18:0,66,730	0/0:8,0:8:21.06:0,21,232	0/0:15,0:15:13.41:0,13,365	0/0:23,1:25:45.96:0,46,711	0/0:28,0:27:78.21:0,78,863	0/0:18,0:18:48.13:0,48,531
chr10	3522258	.	GAAGATGGACACCC	G	2742.79	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.436;DP=755;FS=0.735;HRun=0;HaplotypeScore=265.2045;InbreedingCoeff=0.9989;MQ=77.24;MQ0=0;MQRankSum=-6.724;QD=52.75;ReadPosRankSum=-0.960;VQSLOD=2.4548;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,105,6562	0/0:10,0:10:30.09:0,30,1782	0/0:30,0:29:81.24:0,81,3927	0/0:33,0:33:87.20:0,87,4599	0/0:23,0:23:57.20:0,57,3538	0/0:27,0:26:78.27:0,78,4609	0/0:30,0:30:87.30:0,87,5266	1/1:6,16:22:48.16:1685,48,0	0/0:28,0:28:84.29:0,84,5179	0/0:37,0:37:99:0,105,6674	0/0:12,0:12:36.12:0,36,2339	0/0:30,0:30:87.28:0,87,5066	0/0:29,0:29:87.28:0,87,5457	0/0:24,0:24:72.24:0,72,4371	0/0:30,0:30:84.29:0,84,5095	0/0:17,0:17:45.15:0,45,2810	1/1:12,18:30:30.10:1180,30,0	0/0:17,0:17:48.13:0,48,2592	0/0:25,0:25:69.24:0,69,4011	0/0:32,0:32:90.28:0,90,5376	0/0:49,0:49:99:0,144,8442	0/0:22,0:22:66.20:0,66,3729	0/0:26,0:26:72.25:0,72,4448	0/0:26,0:26:72.23:0,72,4046	0/0:30,0:29:87.27:0,87,5038	0/0:36,0:36:99:0,102,6341	0/0:32,0:31:93.29:0,93,5428	0/0:9,0:9:27.09:0,27,1708
chr10	3528939	.	CAAAA	C	1361.41	PASS	AB=1.000;AC=12;AF=0.214;AN=56;BaseQRankSum=13.852;DP=612;FS=0.434;HRun=6;HaplotypeScore=137.9994;InbreedingCoeff=0.7675;MQ=54.37;MQ0=7;MQRankSum=-5.310;QD=11.44;ReadPosRankSum=4.328;VQSLOD=-0.4955;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:30:38.99:0,39,594	0/0:12,0:12:36.12:0,36,879	0/0:15,0:4:12.04:0,12,213	0/0:21,0:14:20.15:0,20,225	0/0:16,0:16:48.15:0,48,1078	0/0:18,0:18:54.18:0,54,1188	0/0:21,0:21:63.20:0,63,1484	0/0:31,0:30:79.80:0,80,1334	0/0:30,0:30:90.29:0,90,2092	0/0:29,0:29:81.28:0,81,1904	0/0:27,0:27:72.21:0,72,1649	0/0:25,0:25:72.23:0,72,1570	0/0:16,0:16:48.16:0,48,1253	0/0:17,0:17:51.14:0,51,980	1/1:4,14:18:48.03:476,48,0	0/0:18,0:18:54.18:0,54,1183	1/1:3,2:5:9.83:92,10,0	1/1:4,7:11:29.23:240,29,0	0/0:21,0:20:57.15:0,57,1037	0/0:38,0:38:99:0,111,2473	0/0:12,0:12:36.11:0,36,768	0/0:31,0:31:90.30:0,90,2163	0/0:27,0:26:75.26:0,75,1843	0/0:37,0:37:99:0,108,2408	1/1:2,8:10:27:275,27,0	0/1:31,0:31:99:199,0,320	0/1:31,0:30:99:175,0,221	1/1:9,0:8:17.04:82,17,0
chr10	3528941	.	AAAAAC	A	3057.81	PASS	AB=0.792;AC=14;AF=0.250;AN=56;BaseQRankSum=12.309;DP=627;FS=0.938;HRun=0;HaplotypeScore=147.3957;InbreedingCoeff=0.8153;MQ=56.22;MQ0=6;MQRankSum=-4.916;QD=21.53;ReadPosRankSum=1.922;VQSLOD=3.6219;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:36:36.12:0,36,728	0/0:12,0:12:33.11:0,33,918	0/0:15,0:5:7.84:0,8,164	0/1:22,0:15:1.99:2,0,58	0/0:16,0:16:33.11:0,33,928	0/0:18,0:18:39.11:0,39,981	0/0:21,0:21:51.18:0,51,1343	0/0:30,0:29:63.51:0,64,1101	0/0:32,0:32:78.27:0,78,2078	0/0:28,0:28:69.24:0,69,1859	0/0:28,0:28:57.20:0,57,1443	0/0:24,0:24:51.18:0,51,1405	0/0:16,0:16:45.15:0,45,1275	0/0:18,0:18:33.09:0,33,848	1/1:16,0:17:44.51:329,45,0	0/0:18,0:18:39.13:0,39,1083	1/1:6,0:5:8.98:117,9,0	1/1:9,0:11:18.02:113,18,0	0/0:21,0:20:27.09:0,27,715	0/0:39,0:39:93.27:0,93,2290	0/0:15,0:15:30.10:0,30,775	0/0:30,0:30:78.27:0,78,2163	0/0:28,0:27:69.24:0,69,1814	0/0:37,0:37:78.27:0,78,2158	1/1:12,0:12:29.79:228,30,0	0/1:9,22:31:95.57:1122,0,96	1/1:7,24:30:54.01:999,54,0	1/1:1,8:8:18.06:333,18,0
chr10	3528948	.	A	AC	864.70	PASS	AB=0.692;AC=7;AF=0.125;AN=56;BaseQRankSum=10.538;DP=623;FS=2.911;HRun=0;HaplotypeScore=113.4158;InbreedingCoeff=0.8690;MQ=57.33;MQ0=5;MQRankSum=-9.579;QD=17.65;ReadPosRankSum=1.394;VQSLOD=6.0376;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:32:41.57:0,42,333	0/0:14,0:14:42.14:0,42,587	0/0:21,0:7:13.86:0,14,172	0/0:25,0:18:26.23:0,26,248	0/0:16,0:16:48.16:0,48,671	0/0:18,0:18:54.18:0,54,755	0/0:21,0:21:63.21:0,63,880	0/0:33,0:32:93.27:0,93,1230	0/0:32,0:32:93.29:0,93,1268	0/0:28,0:28:81.27:0,81,1132	0/0:25,0:25:72.23:0,72,978	0/0:22,0:22:63.20:0,63,861	0/0:17,0:17:51.16:0,51,697	0/0:14,0:14:40.38:0,40,548	1/1:1,14:15:44.74:345,45,0	0/0:19,0:19:57.17:0,57,764	0/1:5,4:6:5.24:22,0,5	1/1:1,11:11:30.05:331,30,0	0/0:22,0:20:54.11:0,54,699	0/0:34,0:34:99:0,102,1410	0/0:14,0:14:39.12:0,39,529	0/0:33,0:33:96.30:0,96,1311	0/0:30,0:30:90.27:0,90,1211	0/0:36,0:36:79.81:0,80,1351	1/1:2,11:12:35.56:315,36,0	0/0:28,0:28:79.73:0,80,536	0/0:29,0:28:65.41:0,65,438	0/0:9,0:8:16.79:0,17,76
chr10	3528951	.	CAA	C	1258.69	PASS	AB=1.000;AC=12;AF=0.214;AN=56;BaseQRankSum=14.039;DP=628;FS=0.425;HRun=4;HaplotypeScore=123.1470;InbreedingCoeff=0.7645;MQ=58.44;MQ0=4;MQRankSum=-6.773;QD=10.67;ReadPosRankSum=5.167;VQSLOD=0.0083;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:33:42.10:0,42,619	0/0:16,0:16:48.16:0,48,864	0/0:24,0:10:29.88:0,30,378	0/0:24,0:16:32.72:0,33,374	0/0:16,0:16:39.13:0,39,699	0/0:18,0:18:54.18:0,54,983	0/0:21,0:21:63.22:0,63,1160	0/0:35,0:34:99:0,100,1694	0/0:32,0:32:96.33:0,96,1728	0/0:27,0:27:78.27:0,78,1430	0/0:24,0:24:72.25:0,72,1294	0/0:21,0:21:63.21:0,63,1120	0/0:17,0:17:51.17:0,51,934	0/0:14,0:14:42.08:0,42,720	1/1:15,1:16:47.88:540,48,0	0/0:20,0:20:57.19:0,57,988	1/1:7,2:6:7.62:71,8,0	1/1:13,0:12:34.09:267,34,0	0/0:22,0:20:56.53:0,57,880	0/0:35,0:35:99:0,105,1909	0/0:13,0:13:39.13:0,39,700	0/0:34,0:34:99:0,99,1771	0/0:29,0:29:87.30:0,87,1577	0/0:33,0:33:93.30:0,93,1663	1/1:12,1:12:35.67:351,36,0	0/1:28,0:28:85.38:85,0,156	0/1:29,0:28:76.92:77,0,153	1/1:9,0:8:13.32:44,13,0
chr10	3528953	.	A	AC	1424.33	PASS	AB=0.917;AC=7;AF=0.125;AN=56;BaseQRankSum=10.915;DP=637;FS=1.913;HRun=0;HaplotypeScore=118.4530;InbreedingCoeff=0.8638;MQ=59.25;MQ0=4;MQRankSum=-9.492;QD=25.90;ReadPosRankSum=1.468;VQSLOD=3.8613;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:33:41.74:0,42,368	0/0:16,0:16:48.16:0,48,670	0/0:27,0:12:34.48:0,34,347	0/0:25,0:17:27.33:0,27,336	0/0:13,0:13:39.12:0,39,529	0/0:18,0:18:54.18:0,54,755	0/0:21,0:21:63.21:0,63,881	0/0:35,0:34:99:0,100,1351	0/0:33,0:33:96.32:0,96,1341	0/0:26,0:26:78.26:0,78,1091	0/0:24,0:24:72.24:0,72,1004	0/0:22,0:22:66.20:0,66,891	0/0:17,0:17:51.17:0,51,713	0/0:15,0:15:41.81:0,42,556	1/1:1,15:16:48.14:595,48,0	0/0:21,0:21:60.19:0,60,810	0/1:10,1:7:6.91:54,0,7	1/1:1,12:12:31.85:458,32,0	0/0:23,0:21:57.17:0,57,742	0/0:35,0:35:99:0,105,1451	0/0:13,0:13:39.13:0,39,545	0/0:33,0:33:99:0,99,1366	0/0:31,0:31:90.29:0,90,1241	0/0:33,0:33:93.29:0,93,1268	1/1:4,11:14:41.48:466,41,0	0/0:27,0:27:74.81:0,75,493	0/0:31,0:30:69.15:0,69,459	0/0:9,0:8:17.04:0,17,81
chr10	3528958	.	A	AC	1151.44	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=11.042;DP=648;FS=2.643;HRun=0;HaplotypeScore=123.2850;InbreedingCoeff=0.9081;MQ=60.38;MQ0=4;MQRankSum=-9.628;QD=24.50;ReadPosRankSum=1.035;VQSLOD=4.3862;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:33:44.72:0,45,390	0/0:20,0:20:60.15:0,60,786	0/0:29,0:15:15.05:0,15,347	0/0:28,0:20:37.65:0,38,377	0/0:14,0:14:42.14:0,42,586	0/0:18,0:18:54.18:0,54,753	0/0:21,0:21:63.19:0,63,849	0/0:33,0:32:96.32:0,96,1336	0/0:31,0:31:93.29:0,93,1282	0/0:27,0:27:78.24:0,78,1059	0/0:23,0:23:69.23:0,69,964	0/0:21,0:21:60.19:0,60,818	0/0:18,0:18:52.41:0,52,701	0/0:16,0:16:47.93:0,48,611	1/1:3,14:17:50.83:440,51,0	0/0:22,0:22:66.21:0,66,907	0/0:14,0:10:0.37:0,0,59	1/1:4,9:12:33.09:417,33,0	0/0:26,0:25:72.17:0,72,933	0/0:34,0:34:99:0,102,1426	0/0:16,0:16:48.13:0,48,637	0/0:33,0:33:99:0,99,1384	0/0:30,0:30:90.30:0,90,1258	0/0:31,0:31:87.29:0,87,1215	1/1:3,14:16:46.55:436,47,0	0/0:26,0:26:74.80:0,75,470	0/0:28,0:28:63.03:0,63,395	0/0:8,0:8:16.96:0,17,81
chr10	3528960	.	AC	A	1328.35	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=14.802;DP=655;FS=0.845;HRun=1;HaplotypeScore=120.0421;InbreedingCoeff=0.7030;MQ=62.77;MQ0=4;MQRankSum=-9.013;QD=10.46;ReadPosRankSum=4.384;VQSLOD=1.8358;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:30:42.08:0,42,462	0/0:19,0:19:57.18:0,57,811	0/0:33,0:18:49.89:0,50,516	0/0:29,0:21:31.76:0,32,333	0/0:15,0:15:45.13:0,45,638	0/0:18,0:18:54.17:0,54,766	0/0:22,0:22:66.18:0,66,906	0/0:35,0:34:99:0,102,1357	0/0:30,0:30:90.30:0,90,1315	0/0:26,0:26:78.25:0,78,1123	0/0:24,0:24:72.20:0,72,987	0/0:20,0:20:60.19:0,60,858	0/0:17,0:17:51.17:0,51,744	0/0:15,0:15:25.17:0,25,554	1/1:16,1:17:49.37:529,49,0	0/0:24,0:24:72.17:0,72,956	1/1:11,2:10:23.45:128,23,0	1/1:10,3:12:32.93:323,33,0	0/0:26,0:25:72.14:0,72,949	0/0:34,0:34:99:0,102,1490	0/0:15,0:15:45.13:0,45,636	0/0:33,0:33:99:0,99,1442	0/0:30,0:30:90.28:0,90,1277	0/0:32,0:32:90.23:0,90,1270	1/1:17,0:16:47.87:470,48,0	0/1:27,0:27:20.46:20,0,171	0/1:28,0:28:25.47:25,0,98	0/1:12,0:12:0.73:1,0,73
chr10	3528961	.	CAA	C	1290.72	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=13.837;DP=662;FS=0.000;HRun=4;HaplotypeScore=133.3757;InbreedingCoeff=0.5944;MQ=62.91;MQ0=4;MQRankSum=-7.792;QD=11.22;ReadPosRankSum=5.255;VQSLOD=-0.2605;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:48.02:0,48,632	0/0:19,0:19:57.19:0,57,993	0/0:35,0:20:54.68:0,55,714	0/0:29,0:21:40.43:0,40,415	0/0:15,0:15:45.15:0,45,804	0/0:18,0:18:51.16:0,51,891	0/0:22,0:22:66.23:0,66,1177	0/0:36,0:35:96.24:0,96,1545	0/0:30,0:30:90.31:0,90,1616	0/0:26,0:26:78.27:0,78,1422	0/0:24,0:24:66.23:0,66,1153	0/0:20,0:20:60.21:0,60,1081	0/0:18,0:18:54.18:0,54,957	0/0:16,0:16:45.09:0,45,745	1/1:3,14:17:51.07:574,51,0	0/0:24,0:24:63.21:0,63,1080	0/0:13,0:10:9.70:0,10,62	1/1:7,6:12:27.41:246,27,0	0/0:26,0:25:75.18:0,75,1156	0/0:35,0:35:99:0,105,1886	0/0:15,0:15:45.12:0,45,758	0/0:34,0:34:99:0,102,1807	0/0:30,0:30:84.29:0,84,1511	0/0:32,0:32:87.30:0,87,1595	1/1:9,8:16:47.80:451,48,0	0/1:27,0:27:82.43:82,0,190	0/1:29,0:29:76.97:77,0,128	0/1:12,0:12:18.89:19,0,144
chr10	3528963	.	A	AC	1478.18	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=10.927;DP=663;FS=2.622;HRun=0;HaplotypeScore=122.0576;InbreedingCoeff=0.9812;MQ=63.83;MQ0=4;MQRankSum=-9.366;QD=28.98;ReadPosRankSum=1.362;VQSLOD=3.6238;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:30:47.73:0,48,427	0/0:19,0:19:57.19:0,57,797	0/0:34,0:19:55.63:0,56,646	0/0:29,0:21:9.66:0,10,374	0/0:16,0:16:48.15:0,48,653	0/0:17,0:17:51.16:0,51,696	0/0:22,0:22:66.22:0,66,922	0/0:35,0:34:96.28:0,96,1292	0/0:30,0:30:90.30:0,90,1258	0/0:27,0:27:78.26:0,78,1090	0/0:22,0:22:66.22:0,66,912	0/0:20,0:20:60.20:0,60,839	0/0:18,0:18:54.17:0,54,740	0/0:15,0:15:45.09:0,45,591	1/1:15,2:17:51.15:623,51,0	0/0:21,0:21:63.21:0,63,880	0/0:15,0:12:25.20:0,25,172	1/1:10,4:13:35.66:353,36,0	0/0:26,0:25:75.21:0,75,1006	0/0:35,0:35:99:0,105,1451	0/0:16,0:16:48.12:0,48,634	0/0:34,0:34:99:0,102,1403	0/0:30,0:30:90.27:0,90,1224	0/0:31,0:31:87.29:0,87,1215	1/1:12,8:19:51.03:645,51,0	0/0:27,0:27:73.54:0,74,516	0/0:30,0:30:68.95:0,69,449	0/0:12,0:12:29:0,29,247
chr10	3528972	.	CCAG	C	2901.91	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=11.412;DP=660;FS=3.831;HRun=0;HaplotypeScore=141.4143;InbreedingCoeff=0.9996;MQ=67.34;MQ0=1;MQRankSum=-11.869;QD=43.31;ReadPosRankSum=-0.206;VQSLOD=5.2141;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:29.93:0,30,1131	0/0:18,0:18:54.19:0,54,1330	0/0:34,0:23:66.74:0,67,1434	0/0:27,0:20:51.93:0,52,893	0/0:19,0:19:54.19:0,54,1330	0/0:17,0:17:51.18:0,51,1228	0/0:19,0:19:54.14:0,54,1204	0/0:25,0:24:41.40:0,41,1466	0/0:35,0:35:99:0,105,2549	0/0:32,0:32:96.32:0,96,2266	0/0:20,0:20:60.21:0,60,1446	0/0:19,0:19:57.20:0,57,1402	0/0:17,0:17:51.18:0,51,1247	0/0:14,0:14:42.14:0,42,971	1/1:0,18:18:51.17:924,51,0	0/0:22,0:22:66.23:0,66,1619	1/1:1,11:11:27.98:442,28,0	1/1:3,13:15:42.13:680,42,0	0/0:26,0:25:72.22:0,72,1634	0/0:30,0:30:90.31:0,90,2118	0/0:17,0:17:51.18:0,51,1256	0/0:37,0:37:99:0,111,2605	0/0:27,0:27:81.28:0,81,1994	0/0:31,0:31:90.30:0,90,2162	1/1:0,21:21:57.20:1017,57,0	0/0:32,0:32:95.35:0,95,2014	0/0:30,0:30:75.26:0,75,1547	0/0:15,0:15:39.13:0,39,775
chr10	3529362	.	G	GT	1688.89	PASS	AB=0.970;AC=7;AF=0.125;AN=56;BaseQRankSum=-0.420;DP=631;FS=0.519;HRun=6;HaplotypeScore=68.6878;InbreedingCoeff=0.8660;MQ=66.81;MQ0=2;MQRankSum=-0.107;QD=17.41;ReadPosRankSum=0.881;VQSLOD=3.3590;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:96.18:0,96,965	0/0:7,0:7:21.03:0,21,206	0/0:25,0:21:22.75:0,23,347	0/1:30,0:20:2.08:2,0,211	0/0:29,0:29:77.96:0,78,777	0/0:17,0:17:48.11:0,48,489	0/0:15,0:15:30.05:0,30,297	0/0:31,0:31:74.88:0,75,724	0/0:23,0:23:63.12:0,63,635	0/0:29,0:29:82.70:0,83,812	0/0:23,0:23:69.15:0,69,702	0/0:11,0:11:30.07:0,30,306	0/0:15,0:15:42.09:0,42,428	0/0:24,0:24:69.15:0,69,703	0/0:31,0:31:84.17:0,84,850	0/0:24,0:24:66.12:0,66,665	0/0:22,0:22:45.06:0,45,449	0/0:19,0:19:48.01:0,48,482	0/0:19,0:19:39.07:0,39,391	0/0:40,0:40:99:0,108,1083	0/0:21,0:20:54.12:0,54,550	0/0:20,0:20:48.09:0,48,481	0/0:24,0:24:65.97:0,66,649	0/0:14,0:14:41.99:0,42,413	0/0:14,0:14:36.07:0,36,364	1/1:7,21:29:8.01:730,8,0	1/1:3,18:21:45.14:566,45,0	1/1:1,14:15:42.13:528,42,0
chr10	3530711	.	TA	T	2402.35	PASS	AB=0.933;AC=15;AF=0.268;AN=56;BaseQRankSum=10.927;DP=435;FS=3.288;HRun=10;HaplotypeScore=42.7551;InbreedingCoeff=0.9160;MQ=78.68;MQ0=1;MQRankSum=-1.087;QD=17.80;ReadPosRankSum=0.687;VQSLOD=4.0759;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,1:32:61.18:0,61,903	0/0:11,0:11:30.08:0,30,332	0/0:12,0:12:19.33:0,19,210	0/1:13,1:12:5:5,0,170	0/0:21,0:21:45.07:0,45,477	0/0:16,0:16:42.07:0,42,444	0/0:13,0:13:36.07:0,36,381	0/0:17,1:18:25.07:0,25,491	0/0:13,0:13:36.10:0,36,398	0/0:22,0:22:57.15:0,57,631	0/0:20,0:20:51.14:0,51,564	0/0:22,0:22:57.15:0,57,630	0/0:11,0:11:27.06:0,27,290	0/0:15,0:15:45.11:0,45,491	1/1:1,12:13:35.99:313,36,0	0/0:11,0:11:24.06:0,24,266	1/1:3,22:25:62.98:547,63,0	1/1:2,15:17:41.98:365,42,0	0/0:22,0:22:60.15:0,60,650	0/0:9,0:9:21.06:0,21,232	0/0:6,0:6:12.03:0,12,133	0/0:5,0:5:15.04:0,15,166	0/0:8,0:8:24.06:0,24,265	0/0:12,0:12:27.06:0,27,291	1/1:3,12:15:29.99:260,30,0	1/1:4,18:22:53.95:460,54,0	1/1:0,22:22:59.99:521,60,0	1/1:0,7:7:15:130,15,0
chr10	3531272	.	T	TGC	196.60	PASS	AB=1.000;AC=4;AF=0.071;AN=56;BaseQRankSum=5.373;DP=612;FS=15.213;HRun=0;HaplotypeScore=91.5934;InbreedingCoeff=0.4288;MQ=74.95;MQ0=7;MQRankSum=-1.230;QD=2.46;ReadPosRankSum=1.916;VQSLOD=0.9207;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:43:99:0,103,815	0/0:12,0:12:29.96:0,30,298	0/0:39,0:27:69.14:0,69,728	0/0:36,0:22:48.07:0,48,506	0/0:28,0:28:69.07:0,69,714	0/0:19,0:18:38.99:0,39,372	0/0:24,0:23:63.04:0,63,660	0/0:19,0:18:30.49:0,30,272	0/0:15,0:15:39.02:0,39,406	0/0:17,0:17:45.01:0,45,430	0/0:11,0:11:24.04:0,24,282	0/0:23,0:23:50.72:0,51,522	0/0:21,0:21:51:0,51,548	0/0:13,0:13:21.25:0,21,275	0/0:11,1:12:20.97:0,21,219	0/0:26,0:26:69.11:0,69,810	1/1:8,14:23:14.84:174,15,0	0/0:27,0:27:63.66:0,64,658	0/0:14,0:14:21.25:0,21,295	0/1:18,0:18:9.10:9,0,314	0/0:30,0:30:53.56:0,54,544	0/0:22,0:22:62.94:0,63,567	0/0:15,0:15:16.02:0,16,199	0/1:39,0:38:99:122,0,243	0/0:13,0:13:36.04:0,36,379	0/0:28,0:28:75.13:0,75,612	0/0:21,0:21:44.85:0,45,427	0/0:3,0:3:5.98:0,6,48
chr10	3531275	.	G	GCA	535.21	PASS	AB=0.887;AC=11;AF=0.212;AN=52;BaseQRankSum=-3.997;DP=628;FS=0.000;HRun=0;HaplotypeScore=101.2344;InbreedingCoeff=0.3083;MQ=69.47;MQ0=8;MQRankSum=-0.145;QD=2.76;ReadPosRankSum=2.863;VQSLOD=1.9933;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:45,0:44:16.23:16,0,32	0/0:11,0:13:17.65:0,18,147	./.	./.	0/0:27,0:28:32.68:0,33,292	0/0:13,0:18:14.67:0,15,107	0/0:23,0:23:29.86:0,30,281	1/1:16,0:15:0.43:1,0,0	0/0:14,0:16:17.85:0,18,165	0/0:16,0:16:9.88:0,10,80	0/0:11,0:13:18.02:0,18,180	0/0:19,0:22:23.88:0,24,232	0/0:24,0:24:35.82:0,36,322	0/1:13,0:14:5.53:6,0,146	0/0:10,0:10:14.63:0,15,86	0/0:26,0:27:54.18:0,54,510	0/1:22,0:22:46.52:77,0,47	0/0:26,0:26:34.79:0,35,209	1/1:15,2:17:5.72:52,6,0	0/1:18,4:22:10.55:122,0,11	0/0:25,0:33:32.87:0,33,274	0/0:24,0:24:8.51:0,9,97	1/1:12,8:21:3.01:39,3,0	0/1:19,14:35:2.53:353,0,3	0/0:14,0:14:20.42:0,20,117	0/0:33,0:33:8.61:0,9,34	0/0:21,0:21:22.54:0,23,111	0/0:3,0:3:0.89:0,1,2
chr10	3531314	.	CACAG	C	2652.09	PASS	AB=1.000;AC=14;AF=0.250;AN=56;BaseQRankSum=3.049;DP=690;FS=11.361;HRun=0;HaplotypeScore=118.6552;InbreedingCoeff=0.4324;MQ=60.66;MQ0=10;MQRankSum=0.678;QD=10.65;ReadPosRankSum=-0.282;VQSLOD=2.4910;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:55,0:54:99:470,0,278	0/0:13,0:13:33:0,33,528	0/0:27,0:12:26:0,26,273	0/0:30,0:21:30.30:0,30,465	0/0:24,0:24:43.40:0,43,953	0/0:20,0:19:47.93:0,48,470	0/0:26,0:25:69.02:0,69,1034	1/1:17,0:16:35.81:289,36,0	0/0:15,0:14:33:0,33,516	0/1:18,0:18:6.71:7,0,575	0/0:19,0:19:39.01:0,39,649	0/0:24,0:24:56.71:0,57,859	0/0:27,0:27:71.87:0,72,1087	0/0:18,0:18:44.98:0,45,723	0/1:18,0:18:99:115,0,154	0/0:29,0:29:50.38:0,50,1445	0/1:32,0:32:99:277,0,136	0/1:29,0:29:99:246,0,380	0/0:19,0:19:53.48:0,53,512	0/0:24,0:23:42.03:0,42,573	0/0:39,0:39:86.21:0,86,1146	0/0:27,0:27:62.99:0,63,800	0/0:23,0:24:38.72:0,39,398	0/0:36,0:35:69.46:0,69,1046	0/1:22,0:22:99:206,0,222	1/1:7,22:29:37.10:642,37,0	1/1:4,20:24:25.14:461,25,0	1/1:4,1:5:11.97:119,12,0
chr10	3531316	.	CAG	C	2965.33	PASS	AB=0.937;AC=15;AF=0.268;AN=56;BaseQRankSum=5.928;DP=683;FS=5.636;HRun=0;HaplotypeScore=93.3003;InbreedingCoeff=0.7178;MQ=63.89;MQ0=10;MQRankSum=-0.207;QD=13.24;ReadPosRankSum=0.772;VQSLOD=3.0060;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:49,1:49:47.83:668,48,0	0/0:12,0:12:15.57:0,16,301	0/0:27,0:13:29:0,29,297	0/0:32,0:24:39.41:0,39,536	0/0:24,0:24:54.39:0,54,655	0/0:20,0:19:25.02:0,25,313	0/0:26,0:25:59.65:0,60,734	1/1:6,12:17:38.83:315,39,0	0/0:16,0:15:24.53:0,25,349	0/0:18,0:18:45.07:0,45,472	0/0:19,0:19:35.99:0,36,427	0/0:23,0:23:45.51:0,46,581	0/0:27,0:27:51.73:0,52,703	0/0:18,0:18:47.83:0,48,540	0/1:18,1:19:23.10:222,0,23	0/0:28,0:28:47.39:0,47,873	1/1:29,1:30:21.11:374,21,0	0/1:24,3:27:99:379,0,109	0/0:18,0:18:50.33:0,50,431	0/0:24,0:23:44.99:0,45,436	0/0:40,0:40:56.92:0,57,787	0/0:28,0:28:62.96:0,63,605	0/0:23,0:23:38.87:0,39,362	0/0:36,0:35:72:0,72,738	0/1:23,1:24:22.70:357,0,23	1/1:28,0:28:40.79:520,41,0	1/1:23,0:23:26.04:219,26,0	1/1:5,0:5:11.97:104,12,0
chr10	3532770	.	C	CTG	998.56	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-7.797;DP=694;FS=2.900;HRun=0;HaplotypeScore=84.9707;InbreedingCoeff=0.9974;MQ=85.50;MQ0=0;MQRankSum=-2.791;QD=33.29;ReadPosRankSum=2.614;VQSLOD=6.1392;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,111,1529	0/0:10,0:10:30.09:0,30,403	0/0:23,0:23:60.16:0,60,776	0/0:22,0:22:47.63:0,48,613	0/0:29,0:29:75.25:0,75,1049	0/0:23,0:23:60.20:0,60,839	0/0:18,0:18:39.12:0,39,529	0/0:23,0:23:69.20:0,69,931	0/0:24,0:24:66.18:0,66,871	0/0:30,0:30:84.28:0,84,1163	0/0:21,0:21:57.16:0,57,762	0/0:22,0:22:63.18:0,63,847	0/0:16,0:16:42.14:0,42,588	0/0:23,0:23:63.21:0,63,882	0/0:21,0:21:54.17:0,54,734	0/0:22,0:22:66.21:0,66,907	1/1:5,24:30:24.23:1092,24,0	0/0:22,0:22:66.22:0,66,924	0/0:25,0:25:66.21:0,66,906	0/0:23,0:23:66.19:0,66,887	0/0:48,0:48:99:0,123,1720	0/0:28,0:28:78.23:0,78,1057	0/0:23,0:23:66.20:0,66,905	0/0:39,0:39:99:0,105,1470	0/0:23,0:23:60.20:0,60,839	0/0:26,0:26:72.23:0,72,980	0/0:27,0:27:81.24:0,81,1093	0/0:14,0:14:42.14:0,42,584
chr10	3533919	.	AATGGATGGATGGATGGATGGATGG	A	2964.75	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=10.665;DP=818;FS=26.110;HRun=0;HaplotypeScore=467.9880;InbreedingCoeff=0.9153;MQ=64.91;MQ0=19;MQRankSum=-2.757;QD=30.56;ReadPosRankSum=-0.940;VQSLOD=0.0089;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:46:44.66:0,45,5634	0/0:12,0:12:33.11:0,33,2901	0/0:29,0:17:5.88:0,6,45	0/0:30,0:17:8.92:0,9,79	0/0:22,0:22:45.14:0,45,3545	0/0:20,0:20:51.14:0,51,3420	0/0:28,0:28:51.14:0,51,2986	1/1:28,0:24:29.94:298,30,0	0/0:37,0:37:96.18:0,96,5318	0/0:39,0:39:75.10:0,75,4066	0/0:25,0:25:42.05:0,42,1913	0/0:34,0:34:84.25:0,84,5718	0/0:37,0:37:90.24:0,90,6636	0/0:35,0:35:76.11:0,76,5069	0/0:30,0:30:72.22:0,72,4823	0/0:23,0:23:60.19:0,60,4526	0/0:11,0:27:38.96:0,39,2739	0/0:23,0:22:45.14:0,45,2449	0/0:27,0:25:39.12:0,39,2008	0/0:26,0:26:57.16:0,57,4037	0/0:51,0:51:99:0,102,7079	0/0:37,0:37:75.18:0,75,5286	0/0:25,0:25:33.10:0,33,2009	0/0:33,0:33:80.48:0,80,5173	0/0:25,0:25:60.21:0,60,4487	1/1:9,30:39:81.36:1739,81,0	1/1:7,21:28:11.74:713,12,0	1/1:0,2:2:6.02:365,6,0
chr10	3543901	.	T	TAA	362.07	PASS	AC=10;AF=0.217;AN=46;BaseQRankSum=2.179;DP=288;FS=3.213;HRun=13;HaplotypeScore=45.3815;InbreedingCoeff=0.7367;MQ=52.40;MQ0=16;MQRankSum=-1.286;QD=7.54;ReadPosRankSum=-1.921;VQSLOD=-0.3790;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:12,0:11:0.89:2,1,0	0/0:8,0:8:21:0,21,185	0/0:7,0:2:2.92:0,3,26	./.	0/0:18,0:20:7.11:0,7,128	0/0:14,0:12:20.86:0,21,185	0/0:6,0:5:12:0,12,106	./.	0/0:15,0:16:29.57:0,30,249	0/0:19,0:19:14.53:0,15,172	0/0:20,0:21:26.55:0,27,281	0/0:11,0:10:20.90:0,21,181	0/0:7,0:9:4.21:0,4,79	0/0:5,0:6:17.74:0,18,144	1/1:4,4:7:9.03:122,9,0	0/0:9,0:10:20.60:0,21,170	1/1:8,0:5:5.92:39,6,0	1/1:2,6:8:11.53:131,12,0	0/0:12,0:13:10.78:0,11,161	0/0:22,0:22:44.73:0,45,395	0/0:16,0:15:26.83:0,27,236	0/0:9,0:9:8.78:0,9,79	0/0:15,0:15:26.61:0,27,223	0/0:8,0:8:5.83:0,6,97	1/1:4,7:10:15.05:204,15,0	./.	./.	./.
chr10	3544590	.	AG	A	3179.65	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=13.804;DP=724;FS=3.768;HRun=3;HaplotypeScore=80.0279;InbreedingCoeff=0.9827;MQ=67.54;MQ0=0;MQRankSum=-2.664;QD=33.47;ReadPosRankSum=1.584;VQSLOD=4.2928;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:99:0,99,1430	0/0:8,0:8:24.07:0,24,342	0/0:22,0:21:63.20:0,63,895	0/0:20,0:19:54.17:0,54,766	0/0:45,0:45:99:0,132,1898	0/0:24,0:24:72.22:0,72,1039	0/0:10,0:10:24.08:0,24,360	0/0:45,0:45:99:0,126,1851	0/0:16,0:16:48.16:0,48,718	0/0:36,0:36:99:0,108,1579	0/0:22,0:22:60.20:0,60,899	0/0:26,0:26:75.25:0,75,1104	0/0:25,0:25:72.22:0,72,1033	0/0:22,0:22:63.21:0,63,944	1/1:0,30:30:84.27:1091,84,0	0/0:31,0:31:93.32:0,93,1393	1/1:0,27:27:69.22:896,69,0	1/1:1,19:20:51.17:662,51,0	0/0:32,0:32:96.29:0,96,1368	0/0:27,0:27:81.26:0,81,1181	0/0:38,0:38:99:0,114,1687	0/0:25,0:25:75.25:0,75,1114	0/0:37,0:37:99:0,105,1522	0/0:10,0:10:30.10:0,30,450	1/1:0,18:18:54.17:692,54,0	0/0:42,0:42:99:0,126,1887	0/0:27,0:27:81.27:0,81,1212	0/0:5,0:5:9.03:0,9,135
chr10	3545717	.	AC	A	967.69	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.212;DP=644;FS=21.645;HRun=2;HaplotypeScore=59.5734;InbreedingCoeff=0.9919;MQ=81.84;MQ0=0;MQRankSum=-1.239;QD=33.37;ReadPosRankSum=-3.716;VQSLOD=1.0929;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,147,2118	0/0:15,0:15:42.14:0,42,624	0/0:18,1:19:53.13:0,53,657	0/0:16,0:16:41.26:0,41,577	0/0:25,0:25:72.17:0,72,990	0/0:19,0:19:48.16:0,48,716	0/0:13,0:13:38.90:0,39,530	1/1:0,29:29:84.19:1063,84,0	0/0:20,0:20:60.16:0,60,871	0/0:28,0:28:84.26:0,84,1196	0/0:18,0:18:54.17:0,54,783	0/0:15,0:15:45.15:0,45,670	0/0:22,0:22:63.21:0,63,935	0/0:20,0:20:57.17:0,57,813	0/0:22,0:22:60.19:0,60,877	0/0:19,0:19:57.14:0,57,804	0/0:31,0:31:93.28:0,93,1344	0/0:22,0:22:63.19:0,63,902	0/0:22,0:22:66.16:0,66,921	0/0:21,0:21:63.18:0,63,900	0/0:35,0:35:99:0,102,1463	0/0:25,0:25:72.19:0,72,1032	0/0:25,0:25:69.19:0,69,998	0/0:26,0:26:78.21:0,78,1109	0/0:32,0:32:96.28:0,96,1395	0/0:22,0:22:63.21:0,63,942	0/0:27,0:27:81.18:0,81,1145	0/0:7,0:7:18.05:0,18,250
chr10	3545856	.	G	GT	966.75	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-8.212;DP=582;FS=0.000;HRun=10;HaplotypeScore=59.1547;InbreedingCoeff=0.9889;MQ=76.78;MQ0=0;MQRankSum=-4.852;QD=22.48;ReadPosRankSum=1.852;VQSLOD=4.5045;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:33:81.91:0,82,644	0/0:13,0:13:35.96:0,36,296	0/0:18,0:18:18.14:0,18,167	0/0:18,0:16:24.96:0,25,190	0/0:33,0:34:95.82:0,96,782	0/0:17,0:17:44.94:0,45,369	0/0:16,0:17:34.97:0,35,273	0/0:36,2:38:37.67:0,38,690	0/0:18,0:19:49.96:0,50,399	0/0:30,0:30:80.88:0,81,664	0/0:22,0:23:64.95:0,65,520	0/0:13,0:15:43.01:0,43,329	0/0:18,0:18:50.93:0,51,416	0/0:21,1:22:31.34:0,31,457	1/1:0,14:14:36.05:372,36,0	0/0:12,0:13:31.99:0,32,252	0/0:24,0:24:50.91:0,51,415	1/1:1,5:6:15.04:160,15,0	0/0:15,0:16:37.98:0,38,299	0/0:29,0:30:73.94:0,74,597	0/0:14,0:14:35.92:0,36,290	0/0:17,0:17:47.93:0,48,391	0/0:31,0:31:80.87:0,81,661	0/0:14,0:15:40.99:0,41,326	1/1:2,21:23:54.14:576,54,0	0/0:18,0:21:54.01:0,54,404	0/0:32,1:31:60.88:0,61,702	0/0:9,0:9:20.92:0,21,167
chr10	3546090	.	C	CACA	1952.02	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-8.424;DP=751;FS=0.648;HRun=0;HaplotypeScore=105.1096;InbreedingCoeff=0.9721;MQ=68.29;MQ0=2;MQRankSum=-1.208;QD=33.09;ReadPosRankSum=1.495;VQSLOD=3.6938;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:96.31:0,96,1313	0/0:10,0:10:21.06:0,21,276	0/0:31,0:23:16.67:0,17,229	0/0:26,0:18:24.54:0,25,307	0/0:31,0:31:57.17:0,57,770	0/0:19,0:20:45.11:0,45,589	0/0:27,0:27:57.19:0,57,794	0/0:33,0:34:63.18:0,63,852	0/0:31,0:31:72.24:0,72,1003	0/0:33,0:34:84.23:0,84,1112	0/0:27,0:27:63.18:0,63,855	0/0:24,0:24:42.13:0,42,568	0/0:30,0:30:66.22:0,66,920	0/0:37,0:38:90.20:0,90,1166	1/1:8,22:31:57.20:1137,57,0	0/0:23,0:23:48.16:0,48,659	0/0:24,0:24:54.18:0,54,752	1/1:2,9:11:24.08:479,24,0	0/0:12,0:12:30.09:0,30,403	0/0:28,0:28:54.14:0,54,703	0/0:30,0:32:81.20:0,81,1067	0/0:29,0:29:48.16:0,48,669	0/0:23,0:23:39.13:0,39,544	0/0:42,0:41:89.30:0,89,1182	1/1:8,9:17:24.08:479,24,0	0/0:32,0:33:72.20:0,72,957	0/0:36,0:37:90.27:0,90,1228	0/0:3,0:3:9.03:0,9,125
chr10	3547990	.	A	AG	481.14	PASS	AB=0.808;AC=4;AF=0.071;AN=56;BaseQRankSum=8.333;DP=845;FS=3.765;HRun=0;HaplotypeScore=142.9303;InbreedingCoeff=-0.0769;MQ=75.67;MQ0=0;MQRankSum=-8.026;QD=3.54;ReadPosRankSum=-4.363;VQSLOD=2.3886;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:23,3:26:6.17:6,0,850	0/0:9,0:9:24.08:0,24,336	0/0:27,0:26:72.22:0,72,954	0/0:30,0:30:87.06:0,87,1074	0/0:29,0:29:81.26:0,81,1115	0/0:33,0:33:96.31:0,96,1325	0/0:19,0:19:57.15:0,57,775	0/0:61,0:61:99:0,175,2415	0/0:35,0:35:99:0,99,1385	0/0:47,0:47:99:0,138,1905	0/0:26,0:26:75.24:0,75,1034	0/0:33,0:33:99:0,99,1385	0/0:26,0:26:78.26:0,78,1087	0/0:29,0:29:81.26:0,81,1117	0/0:34,5:39:6.70:0,7,1226	0/0:31,0:31:93.30:0,93,1286	0/0:10,1:11:21.07:0,21,294	0/0:10,0:9:20.91:0,21,293	0/0:18,0:18:54.18:0,54,755	0/0:46,0:46:99:0,138,1930	0/0:37,0:37:99:0,111,1552	0/0:31,0:31:93.29:0,93,1283	0/0:29,0:29:84.25:0,84,1125	0/0:17,0:17:48.10:0,48,631	0/1:36,10:46:99:159,0,1161	0/1:47,8:54:99:219,0,1648	0/0:35,1:36:57.51:0,58,1378	0/1:4,5:9:99:202,0,141
chr10	3548007	.	G	GTA	3077.86	PASS	AB=0.747;AC=8;AF=0.143;AN=56;BaseQRankSum=11.925;DP=859;FS=2.767;HRun=0;HaplotypeScore=166.4435;InbreedingCoeff=-0.1667;MQ=78.38;MQ0=0;MQRankSum=-11.577;QD=13.86;ReadPosRankSum=-3.365;VQSLOD=2.8929;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:20,6:26:99:231,0,668	0/0:11,0:11:33.11:0,33,530	0/0:34,0:33:86.94:0,87,1371	0/0:36,0:35:91.36:0,91,1260	0/0:30,0:30:87.28:0,87,1380	0/0:30,0:30:90.22:0,90,1432	0/0:22,0:22:63.20:0,63,995	0/0:53,0:53:25.70:0,26,1898	0/0:38,0:38:99:0,113,1729	0/0:48,0:48:99:0,138,2158	0/0:26,0:26:78.25:0,78,1241	0/0:40,0:40:99:0,120,1900	0/0:28,0:28:84.25:0,84,1316	0/0:31,0:31:93.29:0,93,1455	0/1:27,10:36:99:436,0,1154	0/0:26,0:26:78.24:0,78,1219	0/1:5,4:9:99:203,0,168	0/1:6,2:7:49.60:50,0,152	0/0:17,0:17:51.17:0,51,831	0/0:46,0:46:99:0,138,2206	0/0:39,0:39:99:0,117,1782	0/0:34,0:34:99:0,102,1627	0/0:28,0:28:81.28:0,81,1304	0/0:20,0:20:60.20:0,60,975	0/1:22,15:38:99:838,0,889	0/1:42,17:58:99:803,0,1732	0/1:27,6:33:99:264,0,1150	0/1:4,7:11:99:391,0,109
chr10	3548851	.	G	GTGTA	2164.33	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=-0.819;DP=644;FS=1.871;HRun=0;HaplotypeScore=100.5837;InbreedingCoeff=0.6600;MQ=58.29;MQ0=20;MQRankSum=3.671;QD=10.36;ReadPosRankSum=-2.650;VQSLOD=2.6473;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,20:29:6.02:173,6,0	0/0:7,0:7:20.96:0,21,175	0/0:44,0:19:41.66:0,42,352	0/0:51,0:22:52.85:0,53,409	0/0:20,0:18:44.29:0,44,519	0/0:20,0:20:50.99:0,51,511	0/0:29,0:29:80.99:0,81,982	1/1:28,0:28:26.24:568,26,0	0/0:18,0:18:51.07:0,51,687	0/0:24,0:24:56.94:0,57,619	0/0:12,0:12:32.31:0,32,384	0/0:15,0:15:32.91:0,33,415	0/0:23,0:23:59.97:0,60,778	0/0:22,0:22:51.06:0,51,638	1/1:11,0:19:29.08:232,29,0	0/0:17,0:18:9.81:0,10,126	1/1:1,0:22:6.02:127,6,0	1/1:6,0:10:22.46:152,22,0	0/1:17,0:15:71.05:71,0,190	0/0:20,0:19:50.40:0,50,631	0/0:43,0:39:92.36:0,92,1137	0/0:16,0:15:42.04:0,42,513	0/0:18,0:18:44.99:0,45,527	0/0:32,0:33:90.16:0,90,1292	1/1:11,0:24:27:292,27,0	0/1:20,0:19:74.60:272,0,75	0/1:39,0:39:99:464,0,233	0/0:2,0:2:5.96:0,6,44
chr10	3553499	.	A	AC	5088.37	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-12.489;DP=537;FS=19.192;HRun=7;HaplotypeScore=52.5059;InbreedingCoeff=0.9875;MQ=78.75;MQ0=0;MQRankSum=-3.147;QD=28.27;ReadPosRankSum=-0.225;VQSLOD=3.0658;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,19:23:39.67:563,40,0	0/0:11,0:11:27.01:0,27,253	0/0:25,0:24:55.84:0,56,506	0/0:14,0:15:10.54:0,11,211	0/0:22,0:22:60.10:0,60,579	0/0:24,0:24:69.09:0,69,660	0/0:14,0:14:36.05:0,36,347	1/1:7,26:33:75.03:797,75,0	0/0:23,0:23:60.09:0,60,579	0/0:18,0:18:48.07:0,48,463	0/0:12,0:12:36.06:0,36,348	0/0:21,0:21:60.09:0,60,579	0/0:16,0:16:36.06:0,36,348	0/0:19,0:19:57.09:0,57,549	1/1:4,18:22:44.93:543,45,0	0/0:20,0:21:35.99:0,36,520	1/1:0,9:9:21.06:254,21,0	1/1:1,12:13:33.10:399,33,0	0/0:15,0:15:42.07:0,42,405	0/0:24,0:24:66.10:0,66,637	0/0:27,0:27:66.10:0,66,637	0/0:12,0:12:30.04:0,30,289	0/0:15,0:15:42.07:0,42,405	0/0:21,0:21:57.04:0,57,540	1/1:3,23:26:60.18:724,60,0	1/1:1,16:17:48.15:579,48,0	1/1:1,32:33:90.28:1084,90,0	1/1:0,4:4:12.04:145,12,0
chr10	3554253	.	A	AT	1793.97	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-7.285;DP=667;FS=1.701;HRun=7;HaplotypeScore=69.5939;InbreedingCoeff=0.9987;MQ=78.87;MQ0=0;MQRankSum=-2.872;QD=27.18;ReadPosRankSum=0.207;VQSLOD=4.2840;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:75.11:0,75,724	0/0:13,0:13:39.05:0,39,371	0/0:25,0:24:44.91:0,45,416	0/0:26,0:26:49.03:0,49,509	0/0:35,0:35:90.13:0,90,868	0/0:32,0:32:90.09:0,90,853	0/0:14,0:14:33.05:0,33,319	0/0:38,0:38:99:0,99,952	0/0:14,0:14:39.06:0,39,377	0/0:30,0:30:69.09:0,69,662	0/0:16,0:16:48.08:0,48,463	0/0:27,0:27:75.12:0,75,724	0/0:19,0:19:51.06:0,51,487	0/0:30,0:30:81.13:0,81,782	1/1:5,22:26:72.15:838,72,0	0/0:19,0:19:51.08:0,51,492	0/0:20,0:20:54.09:0,54,521	1/1:6,20:26:71.83:825,72,0	0/0:24,0:24:66.08:0,66,627	0/0:41,0:41:99:0,117,1130	0/0:25,0:25:69.11:0,69,666	0/0:25,0:25:72.11:0,72,695	0/0:15,0:15:42.07:0,42,406	0/0:18,0:18:45.07:0,45,435	1/1:5,8:13:24.03:273,24,0	0/0:36,0:36:96.15:0,96,927	0/0:20,0:20:51.08:0,51,492	0/0:9,0:9:27.04:0,27,261
chr10	3554333	.	TA	T	7669.47	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=14.768;DP=661;FS=4.511;HRun=4;HaplotypeScore=60.9830;InbreedingCoeff=0.9993;MQ=71.97;MQ0=2;MQRankSum=-0.381;QD=31.56;ReadPosRankSum=1.781;VQSLOD=5.3976;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,24:29:63.12:737,63,0	0/0:17,0:17:51.11:0,51,674	0/0:31,0:28:78.25:0,78,1047	0/0:26,0:25:61.02:0,61,789	0/0:29,0:29:84.28:0,84,1175	0/0:25,0:25:75.21:0,75,1000	0/0:16,0:16:48.15:0,48,654	1/1:4,34:38:99:1176,102,0	0/0:17,0:17:51.17:0,51,711	0/0:25,0:25:60.20:0,60,840	0/0:18,0:18:54.18:0,54,756	0/0:22,0:22:63.20:0,63,867	0/0:23,0:23:66.20:0,66,905	0/0:23,0:23:63.20:0,63,866	1/1:0,34:34:90.28:1079,90,0	0/0:23,0:23:69.22:0,69,949	1/1:0,27:27:75.23:899,75,0	1/1:1,27:28:75.23:898,75,0	0/0:18,0:18:54.16:0,54,737	0/0:33,0:33:96.29:0,96,1291	0/0:14,0:14:39.11:0,39,528	0/0:21,0:21:63.20:0,63,864	0/0:25,0:25:75.24:0,75,1032	0/0:12,0:12:36.12:0,36,496	1/1:1,17:18:51.14:598,51,0	1/1:3,31:34:54.27:1059,54,0	1/1:1,27:28:81.25:971,81,0	1/1:0,7:7:21.06:252,21,0
chr10	3554683	.	T	TG	11744.34	PASS	AB=0.526;AC=17;AF=0.304;AN=56;BaseQRankSum=-16.683;DP=771;FS=5.624;HRun=0;HaplotypeScore=73.1330;InbreedingCoeff=0.9154;MQ=73.09;MQ0=0;MQRankSum=-2.613;QD=42.86;ReadPosRankSum=2.775;VQSLOD=5.6219;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,53:53:99:2254,141,0	0/0:16,0:16:48.16:0,48,670	0/0:24,0:24:60.19:0,60,817	0/0:18,0:18:48.05:0,48,631	0/0:31,0:31:87.29:0,87,1202	0/0:23,0:23:69.22:0,69,946	0/0:26,0:26:78.26:0,78,1090	1/1:0,28:28:78.27:1238,78,0	0/0:28,0:28:84.27:0,84,1158	0/0:37,0:37:99:0,111,1514	0/0:17,0:17:48.16:0,48,669	0/0:28,0:28:81.27:0,81,1132	0/0:22,0:22:66.22:0,66,922	0/0:27,0:27:78.25:0,78,1076	1/1:0,39:39:99:1631,102,0	0/0:44,0:44:99:0,129,1802	1/1:1,34:35:99:1582,99,0	1/1:0,25:25:72.25:1149,72,0	0/0:20,0:20:60.20:0,60,837	0/0:23,0:23:69.23:0,69,961	0/0:36,0:36:99:0,108,1508	0/0:27,0:27:78.24:0,78,1058	0/0:22,0:22:60.19:0,60,815	0/0:28,0:28:84.28:0,84,1168	1/1:0,11:11:27.09:432,27,0	0/1:3,27:30:35.62:1196,0,36	1/1:0,36:35:99:1583,99,0	1/1:1,16:17:45.13:681,45,0
chr10	3555846	.	TA	T	2633.31	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=10.212;DP=644;FS=6.859;HRun=10;HaplotypeScore=62.8585;InbreedingCoeff=0.9673;MQ=73.33;MQ0=0;MQRankSum=-1.453;QD=21.07;ReadPosRankSum=0.284;VQSLOD=4.5577;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,22:25:63.88:570,64,0	0/0:14,0:14:36.09:0,36,391	0/0:15,1:16:6.79:0,7,246	0/0:14,0:12:26.64:0,27,260	0/0:47,0:47:99:0,115,1231	0/0:27,2:29:52.13:0,52,788	0/0:19,0:19:51.12:0,51,555	1/1:2,27:29:80.61:676,81,0	0/0:22,0:22:48.11:0,48,521	0/0:27,0:27:69.18:0,69,756	0/0:24,0:24:34.78:0,35,597	0/0:18,1:19:22.08:0,22,472	0/0:23,0:23:57.15:0,57,623	0/0:13,2:15:10.04:0,10,339	1/1:3,22:25:62.97:547,63,0	0/0:17,0:17:45.11:0,45,491	0/0:22,0:22:54.15:0,54,597	1/1:2,26:28:74.98:651,75,0	0/0:28,0:28:63.13:0,63,684	0/0:25,0:25:60.15:0,60,662	0/0:16,0:17:44.95:0,45,479	0/0:22,0:24:65.84:0,66,692	0/0:18,0:18:47.96:0,48,512	0/0:17,0:17:48.09:0,48,517	1/1:3,15:18:41.99:365,42,0	0/0:24,0:24:63.17:0,63,695	0/0:47,0:47:99:0,126,1370	0/0:10,0:10:27.04:0,27,280
chr10	3556209	.	CAA	C	1943.06	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=3.949;DP=557;FS=0.000;HRun=12;HaplotypeScore=75.5082;InbreedingCoeff=0.9691;MQ=69.97;MQ0=1;MQRankSum=-1.014;QD=20.67;ReadPosRankSum=3.510;VQSLOD=3.1465;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,27:31:72.14:732,72,0	0/0:15,0:15:33.10:0,33,473	0/0:17,0:16:35.52:0,36,378	0/0:13,0:11:17.61:0,18,173	0/0:23,0:24:57.19:0,57,833	0/0:28,0:29:80.71:0,81,1093	0/0:13,0:15:36.12:0,36,521	0/0:9,0:27:45.42:0,45,175	0/0:14,0:15:33.09:0,33,438	0/0:21,0:21:51.08:0,51,645	0/0:17,0:20:44.54:0,45,527	0/0:19,0:19:48.10:0,48,601	0/0:18,0:18:42.08:0,42,544	0/0:15,0:16:42.02:0,42,520	1/1:5,26:30:67.87:699,68,0	0/0:16,0:16:45.08:0,45,608	0/0:9,0:13:18.05:0,18,253	1/1:1,10:11:21.03:214,21,0	0/0:17,0:18:51.16:0,51,722	0/0:25,0:25:45.75:0,46,913	0/0:17,0:17:45.11:0,45,611	0/0:25,0:27:62.59:0,63,795	0/0:25,0:25:66.14:0,66,862	0/0:27,0:27:68.90:0,69,982	1/1:4,17:21:45.09:458,45,0	0/0:3,0:14:23.68:0,24,85	0/0:5,1:24:7.46:0,7,93	0/0:1,0:8:17.47:0,17,61
chr10	3556435	.	A	ACG	260.86	PASS	AB=0.916;AC=7;AF=0.125;AN=56;BaseQRankSum=4.780;DP=471;FS=3.446;HRun=0;HaplotypeScore=77.2192;InbreedingCoeff=0.1067;MQ=52.19;MQ0=41;MQRankSum=1.867;QD=3.11;ReadPosRankSum=1.512;VQSLOD=1.9001;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:20:22.63:0,23,174	0/0:8,0:8:17.97:0,18,174	0/0:23,0:5:0.61:0,1,78	0/0:25,0:5:12.88:0,13,143	0/0:10,0:10:10:0,10,168	0/0:20,0:18:37.16:0,37,466	0/0:21,0:16:4.32:0,4,222	0/0:19,0:19:54.63:0,55,373	0/0:15,0:14:20.51:0,21,229	0/0:17,0:16:43.80:0,44,423	0/0:13,0:12:11.05:0,11,240	0/0:21,0:21:27.10:0,27,510	0/0:14,0:12:26.84:0,27,246	0/0:23,0:22:44.65:0,45,626	0/0:7,0:7:7.57:0,8,58	0/0:17,0:16:23.66:0,24,407	0/1:9,23:31:9.51:178,0,10	0/1:11,0:10:34.47:34,0,78	0/0:8,0:6:11.82:0,12,121	0/0:8,0:8:17.87:0,18,215	0/0:32,0:25:39.08:0,39,521	0/1:8,0:7:17.52:18,0,40	0/0:13,0:13:18.05:0,18,248	0/0:38,0:37:77.59:0,78,825	0/0:11,0:11:20.15:0,20,150	0/1:12,0:12:24.24:45,0,24	0/1:14,0:13:19.53:64,0,20	1/1:6,0:4:7.77:51,8,0
chr10	3556437	.	ACG	A	1184.86	PASS	AB=0.959;AC=27;AF=0.482;AN=56;BaseQRankSum=4.007;DP=463;FS=10.551;HRun=0;HaplotypeScore=66.6634;InbreedingCoeff=-0.3341;MQ=50.80;MQ0=39;MQRankSum=0.865;QD=2.97;ReadPosRankSum=-0.964;VQSLOD=0.1633;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:20:21.03:189,21,0	0/1:8,0:8:12.21:42,0,12	0/1:19,0:4:9.23:23,0,9	0/1:24,0:4:10.48:37,0,10	0/1:10,0:10:14.70:15,0,59	0/1:20,0:18:34.22:34,0,167	0/1:21,0:16:26.03:26,0,79	0/1:9,10:19:10.19:193,0,10	0/0:15,0:14:2.25:0,2,55	0/1:17,0:16:62.38:62,0,119	0/1:13,0:12:37.75:38,0,45	0/1:20,0:20:1.21:1,0,192	0/1:13,0:12:8.16:8,0,80	0/0:21,0:20:6.71:0,7,183	1/1:7,0:7:11.86:85,12,0	0/1:16,0:15:48.97:49,0,104	0/1:33,0:31:44:44,0,55	1/1:11,0:10:16.18:119,16,0	0/0:9,0:7:10.06:0,10,44	0/1:8,0:8:1.09:1,0,64	0/1:33,0:26:64.25:64,0,148	0/1:8,0:7:17.65:18,0,51	0/0:13,0:13:17.55:0,18,116	0/1:38,0:37:23.69:24,0,341	1/1:10,0:10:14.93:118,15,0	0/1:5,7:12:46.23:138,0,46	0/1:14,0:13:20.08:20,0,97	0/0:6,0:4:4.04:0,4,24
chr10	3556833	.	TA	T	2350.05	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.574;DP=695;FS=7.141;HRun=2;HaplotypeScore=65.1521;InbreedingCoeff=0.9939;MQ=79.51;MQ0=0;MQRankSum=-1.050;QD=33.57;ReadPosRankSum=1.209;VQSLOD=3.5408;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:81.27:0,81,1212	0/0:12,0:12:36.12:0,36,539	0/0:21,0:21:41.24:0,41,748	0/0:12,0:12:30.08:0,30,407	0/0:27,0:27:81.27:0,81,1212	0/0:30,0:30:90.27:0,90,1288	0/0:29,0:29:87.29:0,87,1304	0/0:35,0:35:96.32:0,96,1421	0/0:26,0:26:78.26:0,78,1169	0/0:36,0:36:99:0,108,1591	0/0:20,0:20:57.19:0,57,841	0/0:26,0:26:78.26:0,78,1168	0/0:29,0:29:87.28:0,87,1280	0/0:28,0:28:84.27:0,84,1239	1/1:1,43:44:99:1558,120,0	0/0:24,0:24:72.23:0,72,1059	0/0:30,0:30:90.30:0,90,1345	1/1:1,10:11:30.10:389,30,0	0/0:26,0:26:78.24:0,78,1126	0/0:26,0:26:75.25:0,75,1122	0/0:23,0:23:66.21:0,66,967	0/0:30,0:30:90.29:0,90,1327	0/0:28,0:28:81.26:0,81,1190	0/0:25,0:25:75.25:0,75,1119	1/1:0,15:15:42.14:545,42,0	0/0:26,0:26:75.25:0,75,1112	0/0:23,0:23:66.22:0,66,988	0/0:6,0:6:15.05:0,15,225
chr10	3558775	.	AAGGCT	A	4155.43	PASS	AB=0.517;AC=7;AF=0.125;AN=56;BaseQRankSum=12.319;DP=659;FS=1.002;HRun=0;HaplotypeScore=123.6374;InbreedingCoeff=0.8356;MQ=83.71;MQ0=0;MQRankSum=-11.021;QD=52.60;ReadPosRankSum=2.609;VQSLOD=4.2962;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:93.32:0,93,2857	0/0:15,0:15:42.14:0,42,1295	0/0:20,0:20:56.85:0,57,1563	0/0:25,0:25:72.25:0,72,2221	0/0:34,0:34:99:0,99,3107	0/0:22,0:22:63.22:0,63,1973	0/0:20,0:20:60.19:0,60,1823	0/0:32,0:32:93.31:0,93,2766	0/0:18,0:18:48.16:0,48,1521	0/0:23,0:23:63.22:0,63,1917	0/0:17,0:17:51.15:0,51,1446	0/0:17,0:17:48.16:0,48,1499	0/0:23,0:23:69.22:0,69,2073	0/0:24,0:24:72.25:0,72,2230	0/0:26,0:26:78.25:0,78,2357	0/0:28,0:28:84.29:0,84,2655	1/1:1,15:16:27.09:585,27,0	0/0:21,0:21:60.19:0,60,1760	0/0:19,0:19:57.20:0,57,1733	0/0:33,0:33:93.31:0,93,2799	0/0:39,0:39:99:0,111,3393	0/0:29,0:29:87.28:0,87,2609	0/0:17,0:17:51.18:0,51,1536	0/0:18,0:18:54.19:0,54,1679	0/0:29,0:29:78.26:0,78,2346	0/1:2,29:31:64.27:1749,0,64	1/1:0,24:24:60.21:1301,60,0	1/1:0,8:8:24.08:521,24,0
chr10	3561065	.	C	CTG	1114.60	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.578;DP=517;FS=5.725;HRun=0;HaplotypeScore=63.7407;InbreedingCoeff=0.9620;MQ=81.68;MQ0=0;MQRankSum=-1.334;QD=46.44;ReadPosRankSum=1.510;VQSLOD=5.0771;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,123,1978	0/0:7,0:7:21.04:0,21,316	0/0:14,0:14:42.07:0,42,603	0/0:16,0:16:38.68:0,39,529	0/0:25,0:25:72.23:0,72,1145	0/0:21,0:21:63.22:0,63,1020	0/0:13,0:13:39.11:0,39,589	0/0:35,0:35:99:0,99,1567	0/0:9,0:9:24.07:0,24,366	0/0:29,0:29:84.28:0,84,1344	0/0:8,0:8:24.07:0,24,369	0/0:19,0:19:54.17:0,54,878	0/0:12,0:12:33.11:0,33,535	0/0:18,0:18:51.16:0,51,787	0/0:24,0:24:72.25:0,72,1171	0/0:12,0:12:36.12:0,36,587	1/1:0,22:24:63.22:1209,63,0	0/0:16,0:16:45.13:0,45,699	0/0:24,0:24:69.23:0,69,1104	0/0:16,0:16:48.16:0,48,780	0/0:26,0:26:69.22:0,69,1091	0/0:15,0:15:45.15:0,45,731	0/0:14,0:14:42.14:0,42,669	0/0:12,0:12:36.12:0,36,587	0/0:16,0:16:48.14:0,48,757	0/0:20,0:20:60.20:0,60,954	0/0:24,0:24:72.19:0,72,1121	0/0:4,0:4:12.04:0,12,196
chr10	3561220	.	ACTCTCTCT	A	1642.10	PASS	AB=0.883;AC=10;AF=0.185;AN=54;BaseQRankSum=5.898;DP=507;FS=3.741;HRun=0;HaplotypeScore=128.7229;InbreedingCoeff=0.5883;MQ=72.90;MQ0=14;MQRankSum=-3.510;QD=13.14;ReadPosRankSum=0.739;VQSLOD=2.0129;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:28:8.48:0,8,196	0/0:5,0:4:6.02:0,6,168	./.	0/0:24,0:20:6.01:0,6,94	0/0:17,0:16:33.10:0,33,969	0/0:16,0:24:27.08:0,27,728	0/0:15,0:15:26.30:0,26,889	1/1:27,0:35:9.90:126,10,0	0/0:11,0:15:29.62:0,30,1132	0/0:14,0:13:21.07:0,21,687	0/0:9,0:9:15.05:0,15,524	0/0:19,0:20:21.07:0,21,786	0/0:15,0:18:33.07:0,33,971	0/0:15,0:17:33.11:0,33,1007	0/0:23,0:22:20.69:0,21,660	0/0:9,0:9:17.89:0,18,623	1/1:7,0:12:9.03:168,9,0	0/0:10,0:10:12.04:0,12,313	0/1:10,0:9:63.10:63,0,233	0/0:9,0:9:6.02:0,6,178	0/0:30,0:30:44.81:0,45,1394	0/0:11,0:11:18.06:0,18,522	0/0:7,0:8:9.03:0,9,287	0/0:33,0:34:60.19:0,60,1969	0/0:13,0:13:7.58:0,8,196	0/1:16,7:23:99:303,0,100	1/1:18,13:33:42.31:1003,42,0	1/1:9,2:10:6.02:132,6,0
chr10	3561446	.	TG	T	1722.82	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=6.255;DP=505;FS=0.480;HRun=8;HaplotypeScore=54.0069;InbreedingCoeff=0.9750;MQ=77.62;MQ0=0;MQRankSum=-0.167;QD=23.28;ReadPosRankSum=1.934;VQSLOD=4.1946;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,1:32:52.38:0,52,890	0/0:3,0:3:9.03:0,9,109	0/0:13,0:13:16.32:0,16,273	0/0:16,0:15:26.32:0,26,333	0/0:25,0:25:75.17:0,75,864	0/0:18,0:18:51.14:0,51,604	0/0:17,0:17:45.12:0,45,521	0/0:23,0:24:60.01:0,60,677	0/0:24,0:24:72.20:0,72,857	0/0:12,0:12:30.09:0,30,361	0/0:14,0:14:36.10:0,36,424	0/0:19,0:19:54.17:0,54,651	0/0:18,0:18:51.16:0,51,616	0/0:19,0:20:60.05:0,60,703	1/1:1,16:17:45.07:435,45,0	0/0:13,0:13:39.11:0,39,460	1/1:1,22:23:69.11:666,69,0	1/1:3,15:18:36.06:348,36,0	0/0:11,0:10:27.08:0,27,326	0/0:10,0:10:24.07:0,24,289	0/0:36,0:36:96.21:0,96,1109	0/0:15,0:15:45.14:0,45,543	0/0:18,0:18:48.14:0,48,568	0/0:15,0:15:39.04:0,39,438	1/1:0,16:16:45.07:435,45,0	0/0:27,0:27:69.21:0,69,833	0/0:26,0:26:69.21:0,69,832	0/0:5,0:5:15.05:0,15,180
chr10	3563045	.	TG	T	1280.92	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.782;DP=563;FS=2.232;HRun=9;HaplotypeScore=77.6926;InbreedingCoeff=0.9218;MQ=60.66;MQ0=1;MQRankSum=0.292;QD=15.07;ReadPosRankSum=0.986;VQSLOD=3.9982;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,32:39:88.06:669,88,0	0/0:4,0:4:9.03:0,9,104	0/0:23,1:18:8.04:0,8,299	0/0:27,0:26:24.14:0,24,362	0/0:21,0:21:57.14:0,57,639	0/0:16,0:16:39.09:0,39,424	0/0:17,0:17:42.12:0,42,485	1/1:8,15:23:44.57:315,45,0	0/0:16,0:16:42.12:0,42,485	0/0:25,1:26:45.40:0,45,621	0/0:18,0:18:45.13:0,45,519	0/0:15,0:15:33.09:0,33,371	0/0:14,1:15:8.65:0,9,353	0/0:17,0:17:36.11:0,36,415	0/0:24,0:24:22.22:0,22,96	0/0:26,0:26:63.15:0,63,709	1/1:4,19:23:48.02:439,48,0	0/0:16,0:16:23.40:0,23,113	0/0:15,0:15:27.05:0,27,292	0/0:21,0:21:51.09:0,51,541	0/0:29,0:29:47.98:0,48,738	0/0:17,0:17:45.12:0,45,511	0/0:21,0:21:54.16:0,54,623	0/0:18,0:18:16.76:0,17,393	0/0:16,0:16:13.99:0,14,72	0/0:16,0:16:40.43:0,40,240	0/0:30,0:30:68.55:0,69,365	0/0:12,0:12:26.01:0,26,154
chr10	3563054	.	G	GT	1763.42	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-4.783;DP=542;FS=1.113;HRun=1;HaplotypeScore=75.4415;InbreedingCoeff=0.9349;MQ=61.69;MQ0=0;MQRankSum=0.117;QD=28.91;ReadPosRankSum=-1.344;VQSLOD=3.0964;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:58.45:0,58,175	0/0:3,0:3:9.03:0,9,117	0/0:27,0:22:41.88:0,42,562	0/0:26,0:26:30.09:0,30,566	0/0:20,0:20:54.17:0,54,686	0/0:14,0:14:42.09:0,42,510	0/0:17,0:17:51.12:0,51,611	0/0:23,0:23:41.29:0,41,118	0/0:17,0:16:48.13:0,48,591	0/0:24,0:24:72.15:0,72,847	0/0:17,0:17:51.13:0,51,626	0/0:14,0:14:39.09:0,39,454	0/0:13,0:13:39:0,39,463	0/0:13,0:13:39.11:0,39,488	0/0:21,0:21:24.88:0,25,64	0/0:26,0:26:72.11:0,72,865	0/0:23,0:23:58.39:0,58,357	0/0:16,0:16:19.14:0,19,49	0/0:14,0:14:38.97:0,39,425	0/0:17,0:17:51.11:0,51,614	0/0:25,0:25:72.18:0,72,888	0/0:18,0:18:48.07:0,48,570	0/0:20,0:20:57.17:0,57,720	0/0:16,0:16:48.09:0,48,562	0/0:15,0:15:15.81:0,16,41	1/1:1,14:15:6.32:505,6,0	1/1:9,20:29:86.88:1060,87,0	1/1:0,17:17:24.08:333,24,0
chr10	3563055	.	TC	T	3540.58	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=7.649;DP=536;FS=0.418;HRun=1;HaplotypeScore=67.7069;InbreedingCoeff=0.9858;MQ=60.76;MQ0=0;MQRankSum=2.429;QD=31.06;ReadPosRankSum=3.173;VQSLOD=3.3748;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,40:40:96.29:1171,96,0	0/0:3,0:3:9.03:0,9,144	0/0:27,0:22:49.50:0,50,736	0/0:26,0:25:52.81:0,53,851	0/0:20,0:20:60.18:0,60,903	0/0:14,0:14:42.14:0,42,663	0/0:18,0:18:54.17:0,54,828	1/1:0,23:23:63.19:780,63,0	0/0:17,0:16:48.16:0,48,754	0/0:25,0:25:72.23:0,72,1100	0/0:17,0:17:51.17:0,51,806	0/0:13,0:13:39.13:0,39,615	0/0:13,0:13:38.96:0,39,586	0/0:13,0:13:39.13:0,39,613	1/1:0,21:21:48.16:671,48,0	0/0:26,0:26:78.25:0,78,1192	0/0:22,0:22:53.90:0,54,445	1/1:0,15:15:36.12:501,36,0	0/0:14,0:14:39.13:0,39,616	0/0:15,0:15:45.15:0,45,709	0/0:25,0:25:72.21:0,72,1100	0/0:17,0:17:51.17:0,51,772	0/0:20,0:20:60.20:0,60,948	0/0:16,0:16:48.16:0,48,725	1/1:0,15:15:30.10:418,30,0	0/0:15,0:15:44.03:0,44,315	0/0:29,0:29:65.45:0,65,548	0/0:17,0:17:23.21:0,23,128
chr10	3563268	.	AGTGTCTGG	A	2688.18	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.757;DP=650;FS=8.879;HRun=0;HaplotypeScore=149.6835;InbreedingCoeff=0.9224;MQ=54.50;MQ0=8;MQRankSum=-9.182;QD=47.16;ReadPosRankSum=-1.940;VQSLOD=2.7771;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,29:30:66.05:1527,66,0	0/0:9,0:8:24.08:0,24,1042	0/0:15,0:4:6.02:0,6,251	0/0:21,0:4:9.50:0,10,217	0/0:31,0:31:84.76:0,85,3475	0/0:19,0:19:54.19:0,54,2399	0/0:29,0:29:81.28:0,81,3498	1/1:8,19:23:48.15:1282,48,0	0/0:28,0:28:78.25:0,78,3290	0/0:19,0:17:48.16:0,48,1880	0/0:16,0:16:48.15:0,48,1632	0/0:27,0:27:78.27:0,78,3393	0/0:29,0:29:87.30:0,87,3835	0/0:30,0:30:87.30:0,87,3851	0/0:25,0:25:72.25:0,72,3136	0/0:32,0:32:90.28:0,90,3693	0/0:28,0:28:81.28:0,81,3605	0/0:22,0:22:66.23:0,66,2842	0/0:23,0:19:57.18:0,57,2365	0/0:26,0:25:75.26:0,75,3087	0/0:27,0:27:72.23:0,72,2928	0/0:22,0:22:60.19:0,60,2429	0/0:21,0:21:57.20:0,57,2355	0/0:26,0:26:72.25:0,72,3082	0/0:14,0:14:42.14:0,42,1822	0/0:22,0:22:63.22:0,63,2590	0/0:24,0:24:72.19:0,72,2824	0/0:8,0:8:24.08:0,24,1073
chr10	3563605	.	TCTC	T	2154.70	PASS	AB=0.512;AC=5;AF=0.089;AN=56;BaseQRankSum=4.825;DP=708;FS=0.550;HRun=0;HaplotypeScore=111.0237;InbreedingCoeff=0.8449;MQ=65.90;MQ0=1;MQRankSum=-0.090;QD=39.90;ReadPosRankSum=2.546;VQSLOD=4.8563;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:87.28:0,87,1873	0/0:9,0:9:27.09:0,27,584	0/0:33,0:30:81.27:0,81,1678	0/0:31,0:28:73.77:0,74,1322	0/0:30,0:30:87.30:0,87,1878	0/0:31,0:30:93.32:0,93,2076	0/0:22,0:22:66.23:0,66,1416	0/0:35,0:34:93.29:0,93,1886	0/0:23,0:23:63.22:0,63,1377	0/0:30,0:30:87.29:0,87,1857	0/0:19,0:19:54.17:0,54,1165	0/0:27,0:27:81.28:0,81,1808	0/0:29,0:29:84.29:0,84,1829	0/0:21,0:21:57.20:0,57,1246	0/0:24,0:24:63.22:0,63,1407	0/0:29,0:29:84.27:0,84,1833	0/0:17,0:18:51.12:0,51,1070	0/0:23,0:23:59.99:0,60,1285	0/0:19,0:19:57.19:0,57,1165	0/0:35,0:35:99:0,102,2240	0/0:34,0:34:99:0,99,2121	0/0:27,0:27:78.25:0,78,1680	0/0:25,0:25:75.26:0,75,1625	0/0:29,0:29:81.26:0,81,1692	0/0:21,0:21:63.19:0,63,1344	0/1:1,20:21:3.83:911,0,4	1/1:0,27:27:69.24:1126,69,0	1/1:0,6:6:15.05:245,15,0
chr10	3564616	.	ATCTTAAAGCATAAGCCATTTGTGT	A	1990.84	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=5.942;DP=686;FS=6.081;HRun=0;HaplotypeScore=383.7152;InbreedingCoeff=0.8603;MQ=63.78;MQ0=1;MQRankSum=-5.176;QD=17.16;ReadPosRankSum=0.124;VQSLOD=0.9476;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:18,18:34:3.01:188,3,0	0/0:11,0:11:27.09:0,27,2633	0/0:27,0:22:21.07:0,21,1042	0/0:21,0:21:30.10:0,30,1454	0/0:28,0:28:60.16:0,60,4681	0/0:33,0:33:72.23:0,72,6591	0/0:25,0:25:54.19:0,54,4638	1/1:22,0:21:6.01:67,6,0	0/0:18,0:18:42.14:0,42,3753	0/0:31,0:31:60.21:0,60,6072	0/0:28,0:28:63.22:0,63,5771	0/0:17,0:17:42.14:0,42,4024	0/0:21,0:21:45.14:0,45,4306	0/0:21,0:21:36.12:0,36,3683	1/1:10,16:24:18.06:1129,18,0	0/0:28,0:28:72.24:0,72,6469	0/0:19,0:19:39.13:0,39,3215	1/1:10,6:16:6.02:376,6,0	0/0:33,0:32:51.18:0,51,3802	0/0:48,0:48:90.31:0,90,8093	0/0:22,0:22:42.14:0,42,3224	0/0:25,0:25:57.20:0,57,4792	0/0:25,0:25:54.19:0,54,5110	0/0:22,0:22:39.13:0,39,3428	1/1:6,10:16:6.02:376,6,0	0/0:25,0:25:42.14:0,42,4049	0/0:39,0:39:90.31:0,90,8281	0/0:3,0:3:9.03:0,9,977
chr10	3564879	.	AC	A	4530.36	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=10.980;DP=653;FS=1.713;HRun=2;HaplotypeScore=72.4877;InbreedingCoeff=0.9993;MQ=69.08;MQ0=0;MQRankSum=-1.195;QD=37.75;ReadPosRankSum=1.278;VQSLOD=5.5239;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,30:30:81.27:1124,81,0	0/0:10,0:10:30.10:0,30,480	0/0:23,0:21:63.10:0,63,956	0/0:21,0:19:54.15:0,54,806	0/0:18,0:18:51.17:0,51,815	0/0:17,0:17:51.16:0,51,787	0/0:21,0:21:63.20:0,63,982	1/1:0,29:29:81.27:1133,81,0	0/0:23,0:23:69.22:0,69,1078	0/0:30,0:30:90.31:0,90,1437	0/0:23,0:23:69.22:0,69,1079	0/0:20,0:20:60.19:0,60,936	0/0:23,0:23:69.24:0,69,1100	0/0:22,0:22:66.22:0,66,1046	1/1:0,27:27:75.25:1049,75,0	0/0:22,0:22:66.22:0,66,1051	0/0:29,0:29:84.26:0,84,1287	1/1:2,17:19:23.35:638,23,0	0/0:18,0:18:54.16:0,54,827	0/0:25,0:25:75.26:0,75,1196	0/0:42,0:42:99:0,123,1954	0/0:23,0:23:69.22:0,69,1078	0/0:17,0:17:48.16:0,48,765	0/0:17,0:17:51.17:0,51,815	1/1:0,15:15:42.14:587,42,0	0/0:32,0:32:96.33:0,96,1533	0/0:42,0:42:99:0,123,1950	0/0:15,0:15:45.15:0,45,719
chr10	3565094	.	C	CTTT	3726.67	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=7.153;DP=569;FS=2.891;HRun=9;HaplotypeScore=90.0556;InbreedingCoeff=0.9881;MQ=64.84;MQ0=10;MQRankSum=-1.588;QD=18.18;ReadPosRankSum=-0.201;VQSLOD=1.3729;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,1:19:12.31:253,12,0	0/0:11,0:11:30.07:0,30,378	0/0:22,0:14:12.70:0,13,265	0/0:25,0:17:25.95:0,26,345	0/0:36,0:36:68.93:0,69,1071	0/0:19,0:19:54.16:0,54,682	0/0:8,0:8:24.08:0,24,303	1/1:7,5:20:33.82:316,34,0	0/0:14,0:14:36.07:0,36,454	0/0:23,0:24:63.12:0,63,765	0/0:38,0:38:99:0,102,1247	0/0:12,0:12:33.07:0,33,399	0/0:17,0:17:48.11:0,48,592	0/0:17,0:18:42.03:0,42,497	1/1:5,13:20:30.04:496,30,0	0/0:15,0:15:36.07:0,36,442	1/1:1,0:22:24.45:73,24,0	1/1:3,8:13:21.03:342,21,0	0/0:15,0:16:48.07:0,48,571	0/0:29,0:29:72.10:0,72,877	0/0:8,0:8:18.05:0,18,227	0/0:21,0:21:54.13:0,54,653	0/0:16,0:16:45.12:0,45,568	0/0:12,0:12:30.08:0,30,365	1/1:1,16:18:36.12:694,36,0	1/1:7,0:31:33.89:505,34,0	1/1:3,2:37:71.27:607,71,0	1/1:3,0:19:56.80:441,57,0
chr10	3565526	.	T	TG	496.55	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=0.460;DP=531;FS=1.551;HRun=3;HaplotypeScore=56.5389;InbreedingCoeff=0.7796;MQ=62.33;MQ0=2;MQRankSum=0.624;QD=22.57;ReadPosRankSum=-0.360;VQSLOD=3.0481;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:30.87:0,31,446	0/0:13,0:13:15.19:0,15,361	0/0:16,0:11:23.84:0,24,241	0/0:12,0:8:2.35:0,2,121	0/0:28,0:28:84.26:0,84,1004	0/0:18,0:18:54.14:0,54,621	0/0:13,0:13:36.10:0,36,418	0/0:26,0:26:69.73:0,70,816	0/0:23,0:23:66.12:0,66,770	0/0:17,0:17:48.06:0,48,554	0/0:20,0:19:57.15:0,57,655	0/0:18,0:18:51.03:0,51,557	0/0:12,0:12:36.09:0,36,407	0/0:22,0:22:58.39:0,58,734	0/0:23,0:23:66.19:0,66,777	0/0:20,0:20:60.11:0,60,648	1/1:0,22:22:45.15:591,45,0	0/0:16,0:16:33.10:0,33,390	0/0:18,0:18:51.04:0,51,566	0/0:31,0:31:87.06:0,87,1041	0/0:13,0:13:39.10:0,39,454	0/0:15,0:15:40.37:0,40,469	0/0:17,0:17:45.12:0,45,526	0/0:22,0:22:60.03:0,60,654	0/0:17,0:17:51.16:0,51,607	0/0:21,0:21:10.15:0,10,209	0/0:16,0:16:27.79:0,28,204	0/0:18,0:18:13.83:0,14,229
chr10	3566229	.	TTTTTTTCTCTTTTTTTCAGAGCTGGG	T	7708.20	PASS	AB=0.570;AC=8;AF=0.143;AN=56;BaseQRankSum=9.345;DP=455;FS=0.000;HRun=0;HaplotypeScore=289.7912;InbreedingCoeff=0.6441;MQ=67.97;MQ0=1;MQRankSum=-9.728;QD=157.31;ReadPosRankSum=4.042;VQSLOD=4.0337;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,16:16:36.12:2399,36,0	0/0:7,0:7:21.07:0,21,1580	0/0:18,0:14:39.11:0,39,1478	0/0:14,0:12:36.12:0,36,2708	0/0:27,0:27:78.27:0,78,7815	0/0:17,0:17:51.18:0,51,4879	0/0:16,0:16:48.13:0,48,5129	1/1:1,0:1:3:28,3,0	0/0:13,0:13:39.13:0,39,3856	0/0:18,0:18:54.19:0,54,5373	0/0:26,0:26:78.27:0,78,8160	0/0:15,0:15:45.15:0,45,5188	0/0:11,0:11:33.11:0,33,3615	0/0:16,0:16:48.16:0,48,4721	0/1:1,16:17:99:2734,0,113	0/0:19,0:19:57.20:0,57,6336	0/0:22,0:22:66.23:0,66,6917	0/1:2,3:5:65.48:626,0,65	0/0:27,0:26:78.27:0,78,6895	0/0:28,0:28:84.29:0,84,8346	0/0:11,0:11:33.11:0,33,3495	0/0:7,0:7:21.07:0,21,1919	0/0:23,0:23:60.21:0,60,6602	0/0:19,0:19:57.20:0,57,5821	1/1:0,10:10:27.09:1922,27,0	0/0:23,0:23:69.22:0,69,6179	0/0:22,0:20:66.23:0,66,7205	0/0:7,0:7:21.07:0,21,2469
chr10	3566543	.	A	AT	3173.63	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=5.326;DP=514;FS=4.695;HRun=8;HaplotypeScore=59.5102;InbreedingCoeff=0.9887;MQ=59.92;MQ0=6;MQRankSum=-2.347;QD=21.44;ReadPosRankSum=-0.212;VQSLOD=3.8670;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:86.99:0,87,784	0/0:9,0:9:24.01:0,24,220	0/0:10,0:5:15:0,15,132	0/0:13,0:6:15:0,15,134	0/0:32,0:32:90.02:0,90,814	0/0:22,0:22:63.02:0,63,573	0/0:12,0:11:24.01:0,24,220	1/1:6,20:24:54.10:592,54,0	0/0:17,0:17:48.01:0,48,434	0/0:21,0:21:57.02:0,57,522	0/0:31,0:31:84.04:0,84,766	0/0:10,0:10:27.01:0,27,247	0/0:13,0:13:24.01:0,24,220	0/0:16,0:16:13.33:0,13,369	1/1:1,16:17:42.12:485,42,0	0/0:22,0:22:65.91:0,66,591	1/1:5,29:34:86.76:981,87,0	1/1:3,12:15:35.98:378,36,0	0/0:19,0:19:47.03:0,47,410	0/0:24,0:24:65.95:0,66,591	0/0:15,0:15:39.02:0,39,357	0/0:11,0:11:21.01:0,21,192	0/0:21,0:21:57.03:0,57,522	0/0:15,0:14:36.02:0,36,329	1/1:2,12:14:36.11:415,36,0	1/1:4,0:18:39.80:202,40,0	1/1:2,0:14:36.77:184,37,0	1/1:0,0:10:28.41:144,28,0
chr10	3567989	.	ATT	A	2915.17	PASS	AB=0.944;AC=11;AF=0.196;AN=56;BaseQRankSum=7.707;DP=565;FS=4.504;HRun=9;HaplotypeScore=74.5021;InbreedingCoeff=0.8980;MQ=68.33;MQ0=0;MQRankSum=0.301;QD=22.95;ReadPosRankSum=-1.053;VQSLOD=2.8945;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,14:14:39.11:454,39,0	0/0:6,0:6:18.06:0,18,295	0/1:16,0:14:5.10:5,0,264	0/0:10,0:11:9.02:0,9,134	0/0:34,0:34:93.30:0,93,1477	0/0:19,0:19:54.18:0,54,885	0/0:11,0:11:33.11:0,33,542	1/1:6,25:31:75.15:849,75,0	0/0:18,0:18:54.16:0,54,816	0/0:16,0:16:42.14:0,42,688	0/0:27,0:27:72.25:0,72,1176	0/0:15,0:15:42.14:0,42,689	0/0:29,0:29:84.27:0,84,1334	0/0:23,0:23:66.20:0,66,1031	1/1:2,20:22:54.16:629,54,0	0/0:24,0:24:69.23:0,69,1111	0/0:0,0:18:30.69:0,31,129	1/1:0,16:16:36.10:419,36,0	0/0:16,0:16:45.15:0,45,737	0/0:28,0:28:72.22:0,72,1114	0/0:18,0:18:54.17:0,54,862	0/0:25,0:26:71.72:0,72,1117	0/0:23,0:23:60.15:0,60,889	0/0:14,0:14:42.14:0,42,688	1/1:1,26:27:63.19:734,63,0	0/0:4,0:33:72.36:0,72,255	0/0:1,0:16:37.31:0,37,131	0/0:0,0:13:27.45:0,27,97
chr10	3568398	.	C	CT	4321.44	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-10.755;DP=648;FS=6.934;HRun=5;HaplotypeScore=55.4930;InbreedingCoeff=0.8985;MQ=55.51;MQ0=14;MQRankSum=-2.996;QD=31.09;ReadPosRankSum=-3.214;VQSLOD=3.9767;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,26:29:75.24:985,75,0	0/0:10,0:10:30.08:0,30,322	0/0:17,0:5:6.01:0,6,64	0/0:16,0:2:2.84:0,3,14	0/0:27,0:27:81.20:0,81,870	0/0:20,0:20:57.12:0,57,604	0/0:14,0:14:39.10:0,39,419	1/1:10,39:46:99:1363,108,0	0/0:15,1:16:2.63:0,3,380	0/0:44,0:44:99:0,123,1321	0/0:34,0:34:93.23:0,93,999	0/0:14,0:14:30.07:0,30,322	0/0:19,0:19:51.13:0,51,548	0/0:20,0:20:54.10:0,54,564	1/1:2,26:28:75.24:987,75,0	0/0:23,0:23:66.15:0,66,701	0/0:23,0:23:56.33:0,56,577	1/1:3,14:17:36.12:474,36,0	0/0:22,0:13:36.09:0,36,384	0/0:30,0:30:81.20:0,81,871	0/0:15,0:15:45.11:0,45,484	0/0:18,0:18:54.14:0,54,580	0/0:22,0:22:63.12:0,63,659	0/0:9,0:8:23.93:0,24,258	1/1:2,14:16:39.13:513,39,0	0/0:34,0:34:87.19:0,87,926	0/0:44,0:44:99:0,123,1322	0/0:18,0:18:51.13:0,51,548
chr10	3571037	.	A	AC	130.45	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=6.035;DP=482;FS=4.605;HRun=0;HaplotypeScore=89.3727;InbreedingCoeff=0.7305;MQ=62.35;MQ0=3;MQRankSum=-5.199;QD=7.25;ReadPosRankSum=0.808;VQSLOD=3.3884;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:5:8.97:0,9,78	0/0:8,0:8:24.08:0,24,335	0/0:20,0:10:27.23:0,27,342	0/0:13,0:8:17.20:0,17,240	0/0:40,0:40:99:0,117,1462	0/0:22,0:22:63.13:0,63,779	0/0:21,0:21:63.17:0,63,815	0/0:16,0:15:24.20:0,24,195	0/0:11,0:11:33.08:0,33,413	0/0:23,0:23:69.13:0,69,858	0/0:25,0:25:75.17:0,75,937	0/0:12,0:12:36.10:0,36,485	0/0:15,0:15:44.97:0,45,533	0/0:10,0:10:27.08:0,27,361	0/0:20,0:19:18.22:0,18,148	0/0:18,0:17:51.13:0,51,650	1/1:8,4:12:21.04:222,21,0	0/1:4,0:4:0.02:0,0,17	0/0:13,0:13:39.08:0,39,492	0/0:41,0:41:99:0,106,1559	0/0:8,0:8:24.05:0,24,301	0/0:21,0:21:60.16:0,60,763	0/0:30,0:30:87.22:0,87,1137	0/0:10,0:10:30.08:0,30,387	0/0:13,0:13:16.23:0,16,139	0/0:16,0:16:43.62:0,44,437	0/0:18,0:18:44.91:0,45,497	0/0:15,0:15:31.31:0,31,301
chr10	3571038	.	AAAAC	A	1228.53	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=9.752;DP=480;FS=1.110;HRun=0;HaplotypeScore=108.5065;InbreedingCoeff=0.6527;MQ=62.30;MQ0=3;MQRankSum=-10.075;QD=10.59;ReadPosRankSum=-4.152;VQSLOD=1.9432;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:4:0.16:0,0,3	0/0:8,0:8:24.08:0,24,515	0/0:21,0:10:25.53:0,26,385	0/0:13,0:8:12.42:0,12,231	0/0:39,0:39:99:0,108,2274	0/0:22,0:22:60.15:0,60,1175	0/0:21,0:21:63.18:0,63,1344	1/1:16,0:15:13.05:124,13,0	0/0:12,0:12:33.08:0,33,699	0/0:24,0:24:71.49:0,71,1289	0/0:23,0:23:66.16:0,66,1343	0/0:11,0:11:33.11:0,33,696	0/0:16,0:16:48.11:0,48,901	0/0:10,0:10:30.07:0,30,556	1/1:14,6:19:29.20:569,29,0	0/0:18,0:17:48.13:0,48,1024	1/1:14,0:12:14.51:91,15,0	1/1:4,0:4:5.96:49,6,0	0/0:13,0:13:39.12:0,39,747	0/0:41,0:41:99:0,110,2324	0/0:7,0:7:21.06:0,21,399	0/0:21,0:21:60.15:0,60,1348	0/0:30,0:30:87.24:0,87,1767	0/0:10,0:10:30.10:0,30,675	1/1:10,3:13:34.79:400,35,0	0/1:16,0:16:5.70:6,0,200	0/1:18,0:18:38.92:39,0,298	0/1:15,0:15:99:124,0,146
chr10	3571042	.	CAAA	C	265.88	PASS	AB=0.926;AC=5;AF=0.089;AN=56;BaseQRankSum=8.109;DP=477;FS=2.610;HRun=9;HaplotypeScore=105.6939;InbreedingCoeff=-0.0502;MQ=58.88;MQ0=4;MQRankSum=-7.773;QD=3.17;ReadPosRankSum=-1.006;VQSLOD=-0.7645;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:5:8.89:0,9,64	0/0:8,0:8:24.07:0,24,455	0/0:21,0:10:18.12:0,18,335	0/0:10,0:5:15.02:0,15,269	0/0:39,0:38:99:0,102,2161	0/0:21,0:21:60.20:0,60,1216	0/0:22,0:22:66.16:0,66,1308	0/0:17,0:16:15.56:0,16,107	0/0:12,0:12:36.11:0,36,729	0/0:27,0:27:78.21:0,78,1489	0/0:23,0:23:63.21:0,63,1319	0/0:12,0:12:36.10:0,36,665	0/0:16,0:16:48.15:0,48,940	0/0:10,0:10:24.07:0,24,477	0/1:21,0:20:19.11:66,0,19	0/0:17,0:16:48.16:0,48,1030	0/1:9,4:13:14.37:205,0,14	0/0:3,0:3:2.51:0,3,7	0/0:13,0:13:33.11:0,33,710	0/0:40,0:40:99:0,110,2112	0/0:7,0:7:18.06:0,18,375	0/0:20,0:20:60.21:0,60,1319	0/0:30,0:30:84.28:0,84,1710	0/0:11,0:11:33.06:0,33,649	0/1:16,0:16:37.61:53,0,38	0/1:13,1:14:26.19:26,0,78	0/1:17,1:18:32.25:32,0,158	0/0:9,0:9:19.92:0,20,132
chr10	3571045	.	A	AC	776.65	PASS	AB=0.862;AC=10;AF=0.179;AN=56;BaseQRankSum=10.435;DP=482;FS=16.191;HRun=0;HaplotypeScore=90.2338;InbreedingCoeff=0.4423;MQ=57.15;MQ0=5;MQRankSum=-8.571;QD=7.84;ReadPosRankSum=1.043;VQSLOD=2.6010;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:6:8.95:0,9,77	0/0:9,0:9:27.07:0,27,333	0/0:20,0:8:16.41:0,16,209	0/0:11,0:6:18.04:0,18,228	0/0:37,0:36:99:0,105,1413	0/0:22,0:22:63.19:0,63,846	0/0:23,0:23:69.16:0,69,894	0/0:16,0:15:26.73:0,27,200	0/0:13,0:13:36.11:0,36,488	0/0:27,0:27:81.24:0,81,1075	0/0:22,0:22:63.20:0,63,866	0/0:13,0:13:39.09:0,39,484	0/0:17,0:17:51.14:0,51,664	0/0:11,0:11:27.06:0,27,342	0/1:15,6:20:27.81:301,0,28	0/0:18,0:17:48.16:0,48,671	0/1:14,0:13:9.08:86,0,9	1/1:2,2:4:0.35:39,0,0	0/0:13,0:13:36.11:0,36,487	0/0:38,0:38:99:0,111,1435	0/0:6,0:6:18.06:0,18,252	0/0:21,0:21:60.20:0,60,839	0/0:28,0:28:78.50:0,78,1111	0/0:12,0:12:33.06:0,33,424	0/1:15,3:18:49.81:185,0,50	1/1:15,0:15:27.80:162,28,0	1/1:18,1:19:11.45:117,11,0	0/1:6,1:7:9.99:37,0,10
chr10	3571053	.	A	AAC	1051.23	PASS	AB=0.819;AC=6;AF=0.107;AN=56;BaseQRankSum=9.927;DP=482;FS=6.023;HRun=0;HaplotypeScore=101.1475;InbreedingCoeff=0.5524;MQ=53.16;MQ0=5;MQRankSum=-9.171;QD=20.61;ReadPosRankSum=-2.633;VQSLOD=3.2831;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:7,0:8:9.33:9,0,52	0/0:7,0:7:21.07:0,21,318	0/0:20,0:8:21.48:0,21,248	0/0:10,0:3:9.03:0,9,138	0/0:37,0:36:99:0,102,1513	0/0:22,0:22:63.20:0,63,935	0/0:22,0:22:66.21:0,66,989	0/0:14,0:13:16.76:0,17,114	0/0:14,0:14:42.10:0,42,598	0/0:26,0:26:78.22:0,78,1115	0/0:23,0:23:66.21:0,66,989	0/0:14,0:14:39.12:0,39,558	0/0:19,0:19:54.16:0,54,787	0/0:10,0:10:30.09:0,30,439	1/1:5,15:20:8.78:584,9,0	0/0:19,0:18:51.16:0,51,740	0/0:17,0:15:3.61:0,4,127	0/1:2,1:3:34.36:54,0,34	0/0:13,0:13:39.12:0,39,571	0/0:33,0:33:96.04:0,96,1389	0/0:6,0:6:18.03:0,18,233	0/0:24,0:24:69.21:0,69,1014	0/0:26,0:26:78.12:0,78,1142	0/0:12,0:12:33.11:0,33,504	1/1:7,13:20:57.01:532,57,0	0/0:17,0:17:50.77:0,51,614	0/0:19,0:19:56.89:0,57,734	0/0:7,0:7:21.07:0,21,296
chr10	3571058	.	CA	C	1629.51	PASS	AB=0.806;AC=13;AF=0.232;AN=56;BaseQRankSum=12.833;DP=482;FS=1.490;HRun=10;HaplotypeScore=89.5565;InbreedingCoeff=0.7222;MQ=53.52;MQ0=6;MQRankSum=-7.942;QD=14.95;ReadPosRankSum=-0.563;VQSLOD=3.8425;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:6,1:7:5.17:5,0,7	0/0:6,0:7:12.33:0,12,172	0/0:17,0:9:17.79:0,18,144	0/0:8,0:3:6:0,6,57	0/0:36,1:36:66.69:0,67,897	0/0:20,0:21:59.92:0,60,619	0/0:21,1:22:33.93:0,34,577	0/0:14,0:13:3.92:0,4,24	0/1:12,2:14:10:10,0,354	0/0:25,0:25:68:0,68,735	0/0:24,0:24:69.18:0,69,755	0/0:16,0:16:45:0,45,465	0/0:18,0:18:54.15:0,54,597	0/0:9,0:10:26.91:0,27,279	1/1:5,13:18:19.04:281,19,0	0/0:20,0:19:28.42:0,28,538	0/0:12,0:14:17.59:0,18,73	0/1:1,1:2:2.38:19,0,2	0/0:17,0:16:36.10:0,36,398	0/0:31,0:31:75.19:0,75,818	0/0:5,0:5:15.04:0,15,166	0/0:24,0:24:35.97:0,36,609	0/0:26,0:26:75.09:0,75,806	0/0:12,1:13:13.05:0,13,372	1/1:1,19:20:56.58:437,57,0	1/1:0,17:17:50.99:442,51,0	1/1:10,14:24:36.54:469,37,0	1/1:2,5:7:15.92:145,16,0
chr10	3571069	.	CAA	C	467.15	PASS	AB=0.886;AC=7;AF=0.125;AN=56;BaseQRankSum=11.027;DP=475;FS=8.403;HRun=10;HaplotypeScore=106.6457;InbreedingCoeff=0.5234;MQ=52.67;MQ0=4;MQRankSum=-10.230;QD=8.05;ReadPosRankSum=-0.559;VQSLOD=0.6115;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:5,1:6:11.22:44,0,11	0/0:9,0:9:24.07:0,24,390	0/0:16,0:7:21.03:0,21,317	0/0:11,0:6:3.45:0,3,135	0/0:38,0:36:96.30:0,96,1598	0/0:21,0:21:60.18:0,60,1023	0/0:20,0:20:57.15:0,57,951	0/1:9,0:9:4.11:4,0,15	0/0:15,0:15:45.15:0,45,778	0/0:25,0:25:72.24:0,72,1269	0/0:23,0:23:63.21:0,63,1094	0/0:14,0:14:42.14:0,42,754	0/0:20,0:20:60.20:0,60,1050	0/0:12,0:12:36.11:0,36,597	1/1:6,12:18:27.11:276,27,0	0/0:19,0:18:51.17:0,51,902	0/0:16,0:14:38.88:0,39,502	0/1:3,1:4:27.07:62,0,27	0/0:15,0:14:39.13:0,39,663	0/0:27,0:27:69.19:0,69,1117	0/0:6,0:6:18.06:0,18,294	0/0:23,0:23:60.19:0,60,992	0/0:26,0:26:71.05:0,71,1240	0/0:14,0:14:42.14:0,42,738	1/1:11,10:21:35.87:219,36,0	0/0:18,0:18:51.13:0,51,636	0/0:20,0:20:60.17:0,60,739	0/0:8,0:8:21.05:0,21,257
chr10	3571082	.	AC	A	687.64	PASS	AB=1.000;AC=12;AF=0.214;AN=56;BaseQRankSum=11.992;DP=478;FS=0.000;HRun=1;HaplotypeScore=99.5417;InbreedingCoeff=0.7418;MQ=58.89;MQ0=2;MQRankSum=-9.689;QD=8.82;ReadPosRankSum=-1.395;VQSLOD=0.4727;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,2:5:10.66:44,11,0	0/0:8,0:8:24.06:0,24,296	0/0:20,0:11:26.41:0,26,354	0/0:14,0:10:15.98:0,16,211	0/0:33,0:32:93.21:0,93,1115	0/0:18,0:18:54.02:0,54,629	0/0:17,0:17:50.93:0,51,580	1/1:10,5:15:6.05:232,6,0	0/0:18,0:18:53.31:0,53,595	0/0:27,0:27:81.24:0,81,1007	0/0:20,0:20:60.07:0,60,737	0/0:14,0:14:42.12:0,42,528	0/0:24,0:24:72.10:0,72,857	0/0:12,0:12:36:0,36,423	1/1:6,12:18:47.10:257,47,0	0/0:16,0:16:48.13:0,48,592	0/0:15,0:13:33.36:0,33,145	1/1:3,1:4:4.52:35,5,0	0/0:16,0:15:42.10:0,42,492	0/0:28,0:28:62.22:0,62,943	0/1:7,0:7:4.85:5,0,196	0/0:17,0:17:51.15:0,51,646	0/0:26,0:26:77.92:0,78,922	0/0:15,0:15:45.15:0,45,580	1/1:9,11:20:52.34:258,52,0	0/0:20,1:20:48.12:0,48,322	0/0:21,0:21:46.56:0,47,248	0/1:9,0:9:23.17:23,0,44
chr10	3571083	.	C	CA	1748.74	PASS	AB=1.000;AC=10;AF=0.179;AN=56;BaseQRankSum=9.410;DP=478;FS=1.666;HRun=7;HaplotypeScore=96.9274;InbreedingCoeff=0.7399;MQ=58.90;MQ0=2;MQRankSum=-7.211;QD=20.10;ReadPosRankSum=-2.747;VQSLOD=2.3571;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:5,0:5:7.59:8,0,23	0/0:8,0:8:21.03:0,21,203	0/0:19,0:11:25.99:0,26,252	0/0:13,0:10:11.68:0,12,189	0/0:32,0:31:81.13:0,81,782	0/0:17,0:17:42.05:0,42,400	0/0:18,0:18:39.04:0,39,371	0/1:15,0:15:23.98:24,0,38	0/0:17,0:17:45.05:0,45,429	0/0:27,0:27:72.10:0,72,689	0/0:20,0:20:57.09:0,57,550	0/0:14,0:14:36.05:0,36,348	0/0:24,0:24:66.10:0,66,636	0/0:13,0:13:33.05:0,33,318	0/0:18,0:18:26.83:0,27,115	0/0:16,0:16:45.07:0,45,434	1/1:2,13:13:31.96:396,32,0	0/0:4,0:4:5.52:0,6,20	0/0:16,0:15:36:0,36,331	0/0:28,0:28:75.10:0,75,718	0/0:8,0:8:17.95:0,18,168	0/0:17,0:17:47.98:0,48,440	0/0:26,0:26:66.09:0,66,633	0/0:15,0:15:45.04:0,45,427	0/0:20,0:20:28.86:0,29,177	1/1:7,14:20:48.12:570,48,0	1/1:5,17:22:60.14:707,60,0	1/1:4,5:9:20.74:211,21,0
chr10	3571089	.	AAC	A	472.93	PASS	AB=0.762;AC=7;AF=0.125;AN=56;BaseQRankSum=8.918;DP=474;FS=2.727;HRun=0;HaplotypeScore=110.3629;InbreedingCoeff=0.5793;MQ=62.28;MQ0=0;MQRankSum=-7.633;QD=7.39;ReadPosRankSum=-0.915;VQSLOD=3.0512;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:5,1:6:2.89:18,0,3	0/0:7,0:7:21.07:0,21,412	0/0:20,0:13:31.89:0,32,523	0/0:14,0:11:33.07:0,33,500	0/0:32,0:31:90.25:0,90,1649	0/0:16,0:16:45.14:0,45,826	0/0:16,0:16:48.15:0,48,873	0/1:11,5:16:8.95:216,0,9	0/0:16,0:16:45.15:0,45,883	0/0:25,0:25:75.21:0,75,1424	0/0:22,0:22:66.19:0,66,1210	0/0:13,0:13:39.12:0,39,731	0/0:24,0:24:72.22:0,72,1344	0/0:13,0:13:36.12:0,36,697	1/1:7,12:19:33.14:233,33,0	0/0:15,0:15:45.15:0,45,879	0/0:16,0:14:41.91:0,42,442	1/1:2,1:3:8.40:41,8,0	0/0:18,0:18:48.11:0,48,795	0/0:26,0:26:78.25:0,78,1466	0/0:8,0:8:21.07:0,21,403	0/0:16,0:16:48.16:0,48,883	0/0:25,0:25:72.21:0,72,1328	0/0:17,0:17:48.15:0,48,896	0/1:10,10:20:21.41:103,0,21	0/0:20,0:19:60.10:0,60,675	0/0:21,0:22:66.16:0,66,752	0/0:9,0:9:21.51:0,22,229
chr10	3571170	.	AAAC	A	2842.38	PASS	AB=1.000;AC=18;AF=0.321;AN=56;BaseQRankSum=13.611;DP=514;FS=14.062;HRun=0;HaplotypeScore=100.5598;InbreedingCoeff=0.7722;MQ=58.47;MQ0=11;MQRankSum=-8.716;QD=15.70;ReadPosRankSum=-3.792;VQSLOD=1.7639;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:12:1.84:193,2,0	0/0:9,0:9:27.06:0,27,433	0/1:28,0:10:7.54:8,0,125	0/0:28,0:7:2.56:0,3,31	0/0:38,0:38:99:0,114,1821	0/0:22,0:22:63.17:0,63,1057	0/0:22,0:22:60.09:0,60,910	1/1:0,23:22:62.99:826,63,0	0/0:15,0:15:45.12:0,45,724	0/0:19,0:17:51.13:0,51,873	0/0:26,0:26:77.95:0,78,1295	0/0:10,0:10:30.07:0,30,477	0/0:19,0:19:51.04:0,51,842	0/0:8,0:8:24.06:0,24,412	1/1:21,2:22:41.59:594,42,0	0/0:15,0:15:45.11:0,45,796	0/1:13,0:13:26.70:27,0,37	1/1:8,2:9:19.82:181,20,0	0/0:25,0:22:63.09:0,63,951	0/0:25,0:25:69.10:0,69,1078	0/0:16,0:15:38.94:0,39,675	0/0:8,0:7:20.56:0,21,356	0/0:16,0:16:48.08:0,48,710	0/0:12,0:12:26.74:0,27,484	1/1:17,3:19:44.77:447,45,0	1/1:22,0:22:10.29:279,10,0	1/1:19,0:19:40.54:301,41,0	1/1:10,0:10:13.58:184,14,0
chr10	3571171	.	AAC	A	2418.57	PASS	AB=1.000;AC=18;AF=0.321;AN=56;BaseQRankSum=14.648;DP=512;FS=12.378;HRun=0;HaplotypeScore=92.4707;InbreedingCoeff=0.8288;MQ=58.46;MQ0=11;MQRankSum=-9.127;QD=13.44;ReadPosRankSum=-4.490;VQSLOD=1.5123;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:12,1:12:9.25:205,9,0	0/0:9,0:9:27.05:0,27,347	0/1:28,0:10:19.42:19,0,64	0/0:28,0:7:0.36:0,0,11	0/0:39,0:39:99:0,116,1483	0/0:22,0:22:62.85:0,63,843	0/0:22,0:22:59.75:0,60,737	1/1:23,0:22:62.93:576,63,0	0/0:15,0:15:45.09:0,45,574	0/0:19,0:17:50.89:0,51,701	0/0:26,0:26:77.93:0,78,1034	0/0:10,0:10:30.04:0,30,377	0/0:19,0:19:50.68:0,51,671	0/0:8,0:8:24.06:0,24,329	1/1:16,7:22:53.53:451,54,0	0/0:15,0:15:44.80:0,45,627	0/1:13,0:13:0.90:44,0,1	1/1:8,1:8:20.58:151,21,0	0/0:24,0:21:63.07:0,63,786	0/0:24,0:24:71.91:0,72,889	0/0:16,0:15:38.80:0,39,538	0/0:8,0:7:21.03:0,21,294	0/0:16,0:16:48.07:0,48,590	0/0:12,0:12:26.33:0,26,375	1/1:16,4:19:49.20:390,49,0	1/1:22,0:22:28.91:302,29,0	1/1:19,0:19:36.96:308,37,0	1/1:10,0:10:20.69:175,21,0
chr10	3571203	.	C	CGG	2812.83	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-1.451;DP=486;FS=1.093;HRun=5;HaplotypeScore=81.7357;InbreedingCoeff=0.9943;MQ=76.73;MQ0=0;MQRankSum=-4.384;QD=43.95;ReadPosRankSum=-1.654;VQSLOD=2.4059;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:19:42.13:0,42,535	0/0:9,0:9:27.09:0,27,344	0/0:20,0:20:23.82:0,24,539	0/0:16,0:11:20.93:0,21,268	0/0:36,0:36:99:0,102,1286	0/0:22,0:22:66.21:0,66,840	0/0:19,0:19:54.17:0,54,688	0/0:29,0:29:81.22:0,81,1001	0/0:16,0:16:42.13:0,42,535	0/0:17,0:17:51.16:0,51,649	0/0:22,0:22:57.18:0,57,726	0/0:12,0:12:33.10:0,33,421	0/0:18,0:18:42.13:0,42,535	0/0:12,0:12:33.10:0,33,421	0/0:18,0:17:36.09:0,36,443	0/0:21,0:21:57.14:0,57,687	1/1:2,17:20:51.17:877,51,0	0/0:9,0:9:21.07:0,21,263	0/0:19,0:19:51.16:0,51,650	0/0:15,0:15:42.13:0,42,535	0/0:20,0:20:57.18:0,57,724	0/0:8,0:8:24.08:0,24,306	0/0:13,0:13:39.11:0,39,483	0/0:13,0:13:39.12:0,39,497	0/0:18,0:18:51.16:0,51,649	1/1:0,26:26:78.24:1330,78,0	1/1:3,6:9:21.07:346,21,0	1/1:1,8:9:24.08:420,24,0
chr10	3571275	.	T	TA	3763.24	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-10.103;DP=577;FS=0.400;HRun=6;HaplotypeScore=60.2316;InbreedingCoeff=0.9851;MQ=75.40;MQ0=0;MQRankSum=-4.421;QD=31.10;ReadPosRankSum=-1.021;VQSLOD=3.7560;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,34:39:90.29:1126,90,0	0/0:7,0:7:21.05:0,21,214	0/0:9,0:9:15.03:0,15,152	0/0:15,0:14:18.83:0,19,263	0/0:32,0:32:90.18:0,90,911	0/0:22,0:22:63.14:0,63,643	0/0:27,0:27:72.10:0,72,711	1/1:1,22:23:66.10:768,66,0	0/0:23,0:23:69.16:0,69,704	0/0:20,0:20:54.11:0,54,546	0/0:14,0:14:36.08:0,36,367	0/0:11,0:11:24.05:0,24,245	0/0:24,0:24:72.16:0,72,734	0/0:16,0:16:39.08:0,39,397	1/1:2,24:26:66.21:830,66,0	0/0:21,0:21:60.13:0,60,612	0/0:33,0:33:75.15:0,75,758	1/1:0,8:8:21.07:264,21,0	0/0:20,0:20:54.12:0,54,551	0/0:18,0:18:51.10:0,51,513	0/0:30,0:30:78.17:0,78,796	0/0:10,0:10:30.07:0,30,306	0/0:16,0:16:42.09:0,42,429	0/0:21,0:21:60.09:0,60,601	1/1:2,23:25:63.16:775,63,0	0/0:29,0:29:75.17:0,75,765	0/0:34,0:34:93.20:0,93,947	0/0:4,0:4:12.03:0,12,122
chr10	3572075	.	A	AG	10144.29	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-15.329;DP=710;FS=4.797;HRun=2;HaplotypeScore=64.4430;InbreedingCoeff=0.9999;MQ=83.80;MQ0=0;MQRankSum=-7.263;QD=39.02;ReadPosRankSum=1.254;VQSLOD=5.4690;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,45:46:99:1675,117,0	0/0:11,0:11:30.09:0,30,372	0/0:22,0:23:61.74:0,62,743	0/0:21,0:21:54.14:0,54,653	0/0:23,0:23:69.20:0,69,842	0/0:23,0:23:66.21:0,66,817	0/0:27,0:27:81.25:0,81,1003	1/1:1,32:33:93.31:1336,93,0	0/0:25,0:25:69.20:0,69,843	0/0:22,0:22:63.20:0,63,781	0/0:23,0:23:63.20:0,63,775	0/0:34,0:34:99:0,99,1221	0/0:25,0:25:69.22:0,69,854	0/0:21,0:21:63.20:0,63,781	1/1:1,26:27:72.24:1037,72,0	0/0:30,0:30:87.27:0,87,1079	1/1:0,35:35:96.32:1382,96,0	1/1:1,20:21:57.19:821,57,0	0/0:15,0:15:45.09:0,45,527	0/0:28,0:28:84.26:0,84,1041	0/0:32,0:32:90.24:0,90,1087	0/0:22,0:22:60.19:0,60,743	0/0:24,0:24:66.21:0,66,817	0/0:21,0:21:54.11:0,54,640	1/1:0,28:28:75.25:1080,75,0	1/1:2,26:28:44.06:1086,44,0	1/1:0,27:27:78.26:1123,78,0	1/1:0,15:15:42.14:605,42,0
chr10	3573523	.	TTTCAG	T	3906.07	PASS	AB=0.520;AC=5;AF=0.089;AN=56;BaseQRankSum=11.131;DP=770;FS=22.242;HRun=0;HaplotypeScore=139.8899;InbreedingCoeff=0.7794;MQ=67.58;MQ0=0;MQRankSum=-4.810;QD=57.44;ReadPosRankSum=1.755;VQSLOD=2.6385;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,120,3719	0/0:16,0:16:48.16:0,48,1599	0/0:30,0:28:84.22:0,84,2506	0/0:22,0:22:66.22:0,66,2012	0/0:21,0:21:63.20:0,63,1965	0/0:18,0:18:54.18:0,54,1701	0/0:26,0:26:78.27:0,78,2544	0/0:28,0:28:84.28:0,84,2616	0/0:29,0:29:87.30:0,87,2794	0/0:37,0:37:99:0,111,3629	0/0:14,0:14:42.14:0,42,1306	0/0:30,0:30:90.29:0,90,2804	0/0:33,0:33:99:0,99,3053	0/0:40,0:40:99:0,120,3876	0/0:50,0:50:99:0,151,4986	0/0:42,0:42:99:0,126,4150	0/0:31,0:31:93.32:0,93,2970	0/0:19,0:19:54.17:0,54,1784	0/0:17,0:17:48.14:0,48,1482	0/0:26,0:26:78.27:0,78,2574	0/0:31,0:31:93.24:0,93,2741	0/0:26,0:26:78.27:0,78,2550	0/0:23,0:23:69.24:0,69,2274	0/0:26,0:26:78.25:0,78,2418	0/0:24,0:24:72.23:0,72,2281	0/1:2,24:26:99:1497,0,125	1/1:0,30:30:81.28:1850,81,0	1/1:0,12:12:24.08:559,24,0
chr10	3573653	.	CAAGTGTATTCCCCAGA	C	3735.50	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.827;DP=818;FS=0.709;HRun=0;HaplotypeScore=364.7068;InbreedingCoeff=0.9997;MQ=68.23;MQ0=0;MQRankSum=-7.218;QD=73.25;ReadPosRankSum=-1.565;VQSLOD=2.1303;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:12,20:32:51.65:2373,52,0	0/0:14,0:14:42.14:0,42,3114	0/0:30,0:30:84.20:0,84,4942	0/0:18,0:19:54.14:0,54,3008	0/0:36,0:36:99:0,105,7361	0/0:22,0:22:63.20:0,63,4353	0/0:25,0:25:69.22:0,69,4721	1/1:7,12:19:36.10:1362,36,0	0/0:25,0:25:69.22:0,69,4887	0/0:31,0:31:81.28:0,81,5884	0/0:31,0:31:84.29:0,84,6121	0/0:38,0:38:99:0,105,7917	0/0:38,0:38:99:0,114,8376	0/0:43,0:43:99:0,117,8351	0/0:44,0:44:99:0,126,9808	0/0:39,0:39:99:0,111,8148	0/0:24,0:24:72.25:0,72,5403	0/0:28,0:28:81.23:0,81,5491	0/0:13,0:13:36.11:0,36,2265	0/0:36,0:36:99:0,108,7709	0/0:32,0:32:87.30:0,87,6251	0/0:27,0:27:78.25:0,78,5700	0/0:36,0:36:99:0,108,7579	0/0:30,0:30:87.30:0,87,6362	0/0:24,0:24:72.23:0,72,5324	0/0:41,0:41:99:0,120,8734	0/0:30,0:30:87.30:0,87,6713	0/0:11,0:11:33.11:0,33,2305
chr10	3574627	.	G	GC	6718.18	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-13.888;DP=726;FS=0.332;HRun=1;HaplotypeScore=70.4388;InbreedingCoeff=0.9999;MQ=70.94;MQ0=0;MQRankSum=-1.571;QD=40.23;ReadPosRankSum=4.747;VQSLOD=5.2589;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,153,1938	0/0:14,0:14:42.14:0,42,543	0/0:22,0:22:57.09:0,57,675	0/0:20,0:19:51:0,51,589	0/0:19,0:19:57.19:0,57,740	0/0:30,0:29:87.28:0,87,1125	0/0:28,0:28:84.24:0,84,1061	0/0:29,0:29:75.24:0,75,962	0/0:26,0:26:75.24:0,75,973	0/0:31,0:31:93.30:0,93,1208	0/0:11,0:11:33.09:0,33,412	0/0:30,0:30:87.27:0,87,1115	0/0:28,0:28:81.22:0,81,1031	0/0:17,0:17:51.17:0,51,662	1/1:1,32:33:81.27:1206,81,0	0/0:36,0:36:99:0,102,1324	1/1:0,22:22:57.19:854,57,0	1/1:0,15:15:45.15:674,45,0	0/0:17,0:17:48.14:0,48,608	0/0:19,0:19:54.18:0,54,700	0/0:42,0:42:99:0,120,1557	0/0:28,0:28:81.25:0,81,1037	0/0:19,0:19:54.16:0,54,684	0/0:40,0:40:99:0,114,1444	1/1:2,19:21:51.17:764,51,0	1/1:2,28:30:48.30:1197,48,0	1/1:0,31:31:90.30:1348,90,0	1/1:0,15:15:45.15:674,45,0
chr10	3575860	.	C	CA	1788.63	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-7.868;DP=705;FS=1.800;HRun=6;HaplotypeScore=75.8412;InbreedingCoeff=0.9973;MQ=82.56;MQ0=0;MQRankSum=-4.369;QD=29.32;ReadPosRankSum=-2.540;VQSLOD=3.2918;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,31:32:84.27:1057,84,0	0/0:8,0:8:21.05:0,21,214	0/0:20,1:21:50.47:0,50,477	0/0:24,0:24:49.40:0,49,489	0/0:31,0:31:78.17:0,78,796	0/0:36,0:36:99:0,99,1003	0/0:27,0:27:72.15:0,72,728	1/1:5,24:29:69.20:854,69,0	0/0:28,0:28:69.15:0,69,704	0/0:35,0:35:96.21:0,96,976	0/0:20,0:20:57.13:0,57,581	0/0:31,0:31:90.19:0,90,911	0/0:22,0:22:63.14:0,63,642	0/0:22,0:22:63.12:0,63,635	0/0:32,0:32:93.19:0,93,940	0/0:27,0:27:75.15:0,75,758	0/0:29,0:29:78.17:0,78,796	0/0:23,0:23:63.12:0,63,635	0/0:20,0:20:57.11:0,57,572	0/0:27,0:27:75.17:0,75,765	0/0:31,0:31:87.20:0,87,887	0/0:31,0:31:84.19:0,84,857	0/0:23,0:23:69.16:0,69,704	0/0:9,0:9:27.06:0,27,276	0/0:24,0:24:63.11:0,63,633	0/0:28,0:28:78.17:0,78,796	0/0:21,0:21:45.09:0,45,459	0/0:14,0:14:42.09:0,42,428
chr10	3579546	.	GA	G	2534.42	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=10.615;DP=609;FS=0.398;HRun=9;HaplotypeScore=94.6630;InbreedingCoeff=0.9669;MQ=65.63;MQ0=6;MQRankSum=0.674;QD=20.95;ReadPosRankSum=0.673;VQSLOD=3.7480;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,33:35:90.04:823,90,0	0/0:9,0:9:27.08:0,27,312	0/0:27,0:13:17.12:0,17,269	0/0:21,0:12:18.95:0,19,185	0/0:26,0:25:78.19:0,78,880	0/0:26,0:26:66.20:0,66,762	0/0:21,0:21:60.18:0,60,692	1/1:4,24:28:68.56:630,69,0	0/0:17,0:17:48.14:0,48,554	0/0:19,0:19:51.14:0,51,581	0/0:15,0:15:35.96:0,36,385	0/0:16,0:15:42.12:0,42,476	0/0:19,0:19:51.15:0,51,582	0/0:25,0:25:63.19:0,63,726	0/0:2,0:25:59.66:0,60,303	0/0:27,0:27:63.16:0,63,707	0/0:25,0:25:69.19:0,69,786	0/0:5,0:24:54.12:0,54,298	0/0:19,1:20:23.68:0,24,527	0/0:22,1:23:32.64:0,33,597	0/0:12,1:13:5.83:0,6,318	0/0:21,0:21:60.18:0,60,692	0/0:21,0:21:57.15:0,57,637	0/0:19,0:19:54.16:0,54,623	0/0:0,0:26:51.13:0,51,260	1/1:4,28:32:52.43:734,52,0	1/1:3,18:21:42.02:384,42,0	1/1:0,5:5:15.01:137,15,0
chr10	3582565	.	TG	T	963.36	PASS	AB=0.739;AC=6;AF=0.107;AN=56;BaseQRankSum=12.189;DP=541;FS=8.188;HRun=5;HaplotypeScore=84.5797;InbreedingCoeff=0.2834;MQ=78.67;MQ0=5;MQRankSum=-9.467;QD=9.09;ReadPosRankSum=0.712;VQSLOD=0.4258;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:12,7:18:21.93:136,0,22	0/0:9,0:9:27.08:0,27,353	0/0:37,0:26:65.40:0,65,669	0/0:31,0:19:43.86:0,44,365	0/0:30,0:30:87.23:0,87,1120	0/0:34,0:33:99:0,99,1288	0/0:9,0:9:27.07:0,27,351	0/1:14,9:23:11.18:196,0,11	0/0:15,0:15:45.14:0,45,598	0/0:21,0:21:63.19:0,63,830	0/0:22,0:22:60.14:0,60,738	0/0:18,0:18:51.11:0,51,627	0/0:18,0:18:54.15:0,54,705	0/0:6,0:6:18.06:0,18,246	0/0:16,0:16:45.14:0,45,596	0/0:22,0:22:57.16:0,57,743	0/0:21,0:23:65.89:0,66,804	0/0:23,0:23:63.09:0,63,797	0/0:15,0:15:45.15:0,45,614	0/0:24,0:24:72.21:0,72,940	0/0:14,0:14:36.06:0,36,453	0/0:8,0:8:21.05:0,21,270	0/0:19,0:19:54.13:0,54,688	0/0:9,0:9:3.84:0,4,287	0/0:12,0:12:36.10:0,36,461	0/1:10,14:24:9.03:299,0,9	1/1:14,19:33:25.84:430,26,0	0/1:6,1:7:20.44:32,0,20
chr10	3582575	.	TTTG	T	2072.38	PASS	AB=0.749;AC=8;AF=0.143;AN=56;BaseQRankSum=11.596;DP=539;FS=9.857;HRun=0;HaplotypeScore=98.9025;InbreedingCoeff=0.6257;MQ=73.21;MQ0=5;MQRankSum=-8.069;QD=19.01;ReadPosRankSum=1.051;VQSLOD=2.9328;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,9:17:1.22:258,1,0	0/0:9,0:9:27.09:0,27,550	0/0:36,0:24:16.36:0,16,537	0/0:28,0:15:26.63:0,27,305	0/0:32,0:32:93.22:0,93,1695	0/0:32,0:31:90.29:0,90,1864	0/0:8,0:8:24.06:0,24,376	1/1:10,14:24:12.03:514,12,0	0/0:17,0:17:51.14:0,51,957	0/0:21,0:21:60.19:0,60,1214	0/0:19,0:19:54.15:0,54,1067	0/0:13,0:13:39.13:0,39,810	0/0:18,0:18:54.14:0,54,970	0/0:7,0:7:21.06:0,21,383	0/0:18,0:18:45.12:0,45,849	0/0:19,0:19:54.13:0,54,887	0/0:23,0:23:66.21:0,66,1233	0/0:23,0:23:60.18:0,60,1137	0/0:19,0:19:54.11:0,54,874	0/0:27,0:27:78.20:0,78,1429	0/0:12,0:12:36.12:0,36,745	0/0:7,0:7:21.07:0,21,419	0/0:19,0:19:54.16:0,54,1058	0/0:9,0:9:26.85:0,27,413	0/0:14,0:14:42.10:0,42,756	0/1:9,16:25:40.89:569,0,41	1/1:7,27:34:33.61:785,34,0	0/1:7,1:8:11.14:87,0,11
chr10	3584831	.	T	TC	5776.49	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-10.825;DP=743;FS=0.342;HRun=3;HaplotypeScore=70.2774;InbreedingCoeff=0.9994;MQ=77.48;MQ0=0;MQRankSum=-1.933;QD=37.51;ReadPosRankSum=-2.683;VQSLOD=4.0844;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,47:51:99:1806,129,0	0/0:12,0:12:30.09:0,30,360	0/0:24,0:24:62.96:0,63,727	0/0:14,0:14:36.10:0,36,423	0/0:29,0:29:84.26:0,84,1006	0/0:24,0:24:60.18:0,60,720	0/0:25,0:25:72.20:0,72,852	1/1:1,36:37:99:1494,108,0	0/0:22,0:22:63.17:0,63,732	0/0:33,0:33:96.29:0,96,1152	0/0:8,0:8:24.07:0,24,288	0/0:26,0:26:78.24:0,78,936	0/0:26,0:26:78.21:0,78,911	0/0:34,0:34:99:0,99,1188	0/0:40,0:40:99:0,114,1344	0/0:41,0:41:99:0,120,1440	0/0:25,0:25:69.18:0,69,813	0/0:23,0:23:60.18:0,60,720	0/0:26,0:26:63.19:0,63,756	0/0:19,0:19:54.16:0,54,648	0/0:35,0:35:99:0,99,1176	0/0:30,0:30:90.25:0,90,1057	0/0:24,0:24:66.19:0,66,780	0/0:22,0:22:60.18:0,60,720	0/0:27,0:27:75.22:0,75,885	1/1:1,22:23:66.22:923,66,0	1/1:3,26:29:72.24:1008,72,0	1/1:0,14:14:39.13:545,39,0
chr10	3587466	.	C	CA	1496.41	PASS	AB=0.892;AC=18;AF=0.321;AN=56;BaseQRankSum=4.510;DP=505;FS=1.177;HRun=11;HaplotypeScore=106.9786;InbreedingCoeff=0.6500;MQ=48.67;MQ0=12;MQRankSum=-5.395;QD=7.48;ReadPosRankSum=-2.292;VQSLOD=2.0663;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,16:27:24.93:240,25,0	0/0:6,0:6:11.93:0,12,89	0/1:3,0:1:0:0,0,0	0/0:2,0:2:0.98:0,1,8	0/0:25,0:25:19.77:0,20,145	0/0:20,0:17:20.82:0,21,159	0/0:19,0:19:29.78:0,30,228	1/1:11,8:19:9.76:260,10,0	0/0:14,0:15:5.86:0,6,46	0/1:29,2:29:21.22:21,0,198	0/1:15,0:14:12.02:12,0,58	0/0:13,0:14:16.81:0,17,120	0/0:15,0:15:8.88:0,9,69	0/0:18,0:19:20.11:0,20,145	1/1:20,7:27:15.66:310,16,0	0/0:27,0:27:26.55:0,27,204	0/0:31,0:31:53.53:0,54,416	1/1:10,2:10:9.49:92,9,0	0/0:13,0:13:25.38:0,25,185	0/0:23,1:22:13.11:0,13,210	0/0:20,0:20:29.60:0,30,230	0/0:23,0:21:16.48:0,16,271	0/0:15,0:15:20.87:0,21,162	0/0:14,1:12:20.89:0,21,162	0/1:8,12:19:1.92:156,0,2	1/1:8,10:19:13.31:266,13,0	1/1:13,9:22:9.77:263,10,0	1/1:1,2:2:6.01:61,6,0
chr10	3587482	.	CAA	C	976.75	PASS	AB=0.750;AC=9;AF=0.161;AN=56;BaseQRankSum=1.781;DP=551;FS=1.981;HRun=14;HaplotypeScore=81.4073;InbreedingCoeff=0.8333;MQ=52.38;MQ0=10;MQRankSum=-2.286;QD=11.10;ReadPosRankSum=1.205;VQSLOD=2.7831;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:25:35.20:0,35,342	0/1:4,1:6:10.23:10,0,156	0/0:8,0:3:9.02:0,9,97	0/0:6,0:4:9:0,9,94	0/0:29,0:30:77.66:0,78,986	0/0:18,0:16:35.15:0,35,415	0/0:20,0:20:40.49:0,40,447	1/1:11,15:26:32.57:351,33,0	0/0:13,0:14:32.95:0,33,386	0/0:24,0:26:59.49:0,59,658	0/0:21,0:20:44.63:0,45,582	0/0:18,0:18:41.74:0,42,485	0/0:19,0:22:38.51:0,39,467	0/0:15,0:16:26.49:0,26,287	1/1:6,17:25:50.41:440,50,0	0/0:25,0:25:65.28:0,65,688	0/0:27,0:28:62.55:0,63,766	1/1:4,6:8:11.82:110,12,0	0/0:19,0:20:41.37:0,41,454	0/0:26,0:27:55.48:0,55,614	0/0:14,0:17:34.91:0,35,412	0/0:18,0:19:41.37:0,41,430	0/0:15,0:17:32.98:0,33,387	0/0:19,0:17:29.58:0,30,372	1/1:9,11:20:20.59:225,21,0	0/0:26,0:28:72.57:0,73,771	0/0:19,0:20:50.03:0,50,492	0/0:8,0:8:11.91:0,12,261
chr10	3588572	.	GA	G	4339.70	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=11.554;DP=740;FS=2.131;HRun=2;HaplotypeScore=71.4351;InbreedingCoeff=0.9593;MQ=94.62;MQ0=0;MQRankSum=-2.682;QD=35.57;ReadPosRankSum=-0.512;VQSLOD=5.0509;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,150,2113	0/0:10,0:10:30.07:0,30,426	0/0:35,0:35:94.57:0,95,1330	0/0:41,0:41:87.67:0,88,1524	0/0:21,0:21:63.20:0,63,920	0/0:18,0:18:51.14:0,51,722	0/0:27,0:27:81.25:0,81,1170	1/1:1,30:31:84.23:1059,84,0	0/0:24,0:24:72.24:0,72,1077	0/0:20,0:20:57.19:0,57,832	0/0:21,0:21:60.19:0,60,876	0/0:31,0:31:93.29:0,93,1352	0/0:27,0:27:78.25:0,78,1136	0/0:30,0:30:87.23:0,87,1238	0/0:31,0:31:90.26:0,90,1269	0/0:26,0:26:78.26:0,78,1166	1/1:0,42:42:99:1498,117,0	0/0:24,0:24:72.23:0,72,1056	0/0:24,0:24:72.15:0,72,957	0/0:31,0:31:93.27:0,93,1324	0/0:32,0:32:96.33:0,96,1437	0/0:20,0:20:57.18:0,57,835	0/0:21,0:21:60.20:0,60,897	0/0:39,0:39:99:0,111,1572	0/0:14,0:14:34.38:0,34,539	1/1:1,15:16:3.20:539,3,0	1/1:0,21:21:63.20:817,63,0	1/1:0,12:12:33.11:428,33,0
chr10	3589283	.	CAAAA	C	1792.23	PASS	AB=0.796;AC=10;AF=0.179;AN=56;BaseQRankSum=4.296;DP=528;FS=13.218;HRun=15;HaplotypeScore=87.3364;InbreedingCoeff=0.7237;MQ=49.35;MQ0=31;MQRankSum=-1.955;QD=20.37;ReadPosRankSum=6.167;VQSLOD=0.8530;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:35:77.95:0,78,1481	0/0:4,0:1:0:0,0,0	0/0:10,0:7:21.07:0,21,328	0/1:7,0:3:10.17:10,0,60	0/0:24,0:17:36.12:0,36,750	0/0:15,0:15:36.12:0,36,758	0/0:19,0:22:66.22:0,66,1257	1/1:10,7:13:23.42:277,23,0	0/0:20,0:20:42.14:0,42,937	0/0:20,0:19:42.14:0,42,816	0/0:11,0:8:21.07:0,21,455	0/0:14,0:16:33.11:0,33,605	0/0:21,0:18:27.09:0,27,557	0/0:20,0:23:60.20:0,60,1215	0/0:15,0:18:27.52:0,28,524	0/0:9,0:9:17.97:0,18,269	1/1:5,22:27:66.13:882,66,0	0/0:14,0:27:49.70:0,50,949	0/0:31,0:28:63.17:0,63,1256	0/0:21,0:20:45.15:0,45,956	0/0:19,0:19:29.72:0,30,414	0/0:15,0:11:21.07:0,21,427	0/0:14,0:13:36.12:0,36,800	0/0:29,0:27:66.22:0,66,1363	0/0:4,0:11:21.07:0,21,402	0/1:5,10:15:76.19:297,0,76	1/1:5,10:14:26.96:367,27,0	1/1:1,3:3:9.03:123,9,0
chr10	3589360	.	CTTGTTGGAGGGGGTGTGGAT	C	1606.74	PASS	AB=0.915;AC=4;AF=0.071;AN=56;BaseQRankSum=8.685;DP=862;FS=3.706;HRun=0;HaplotypeScore=351.3616;InbreedingCoeff=-0.0802;MQ=47.62;MQ0=36;MQRankSum=-5.870;QD=13.97;ReadPosRankSum=0.407;VQSLOD=1.4929;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:37:77.99:0,78,2197	0/0:12,0:10:21:0,21,680	0/0:35,0:18:41.52:0,42,708	0/0:36,0:21:7.92:0,8,942	0/0:22,0:19:39.13:0,39,1386	0/0:25,0:25:66.22:0,66,2189	0/0:44,0:44:47.98:0,48,2413	0/0:45,0:33:72.25:0,72,1812	0/0:26,0:25:38.91:0,39,999	0/0:28,0:28:59.07:0,59,1793	0/0:16,0:16:42.11:0,42,1283	0/0:26,0:22:20.90:0,21,601	0/0:36,0:35:42.36:0,42,1929	0/0:36,0:33:45.06:0,45,1036	0/0:28,0:28:33.06:0,33,941	0/0:24,0:21:27.04:0,27,1058	0/1:42,0:36:99:602,0,334	0/0:32,0:31:46.72:0,47,2205	0/0:29,0:18:39.11:0,39,993	0/0:25,0:24:53.40:0,53,1646	0/0:76,0:73:99:0,171,5221	0/0:22,0:22:57.17:0,57,1533	0/0:15,0:15:30.10:0,30,898	0/0:45,0:44:99:0,123,3983	0/0:23,0:22:29.96:0,30,779	0/1:20,21:31:99:830,0,367	0/1:21,0:15:99:169,0,189	0/1:11,0:9:99:115,0,116
chr10	3589525	.	AGGAG	A	313.80	PASS	AB=0.931;AC=7;AF=0.140;AN=50;BaseQRankSum=1.376;DP=495;FS=2.467;HRun=0;HaplotypeScore=64.3786;InbreedingCoeff=-0.2267;MQ=29.37;MQ0=71;MQRankSum=-0.705;QD=1.94;ReadPosRankSum=0.630;VQSLOD=1.4919;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:21:6.01:0,6,60	./.	0/0:11,0:2:6.02:0,6,144	0/0:13,0:1:2.97:0,3,20	./.	0/0:8,0:7:6.01:0,6,58	./.	0/1:16,2:6:14.23:14,0,43	0/0:21,0:18:17.80:0,18,161	0/0:14,0:7:17.99:0,18,165	0/0:10,0:8:3.01:0,3,41	0/1:32,0:26:2.82:3,0,101	0/0:25,0:17:20.99:0,21,203	0/0:36,0:34:26.64:0,27,284	0/1:37,0:28:61.47:61,0,159	0/0:30,0:21:11.84:0,12,133	0/1:32,0:22:19.02:19,0,237	0/1:18,0:12:31.16:31,0,114	0/0:11,0:4:12.02:0,12,116	0/0:7,0:6:3:0,3,29	0/0:13,0:7:6:0,6,53	0/0:12,0:7:9.02:0,9,95	0/0:10,0:8:3:0,3,29	0/0:27,0:24:17.93:0,18,165	0/0:5,0:4:3:0,3,28	0/1:16,3:10:36.49:195,0,36	0/0:21,0:15:18.01:0,18,169	0/1:4,2:4:20.03:107,0,20
chr10	3589531	.	GT	G	1323.88	PASS	AB=0.976;AC=39;AF=0.848;AN=46;BaseQRankSum=-4.602;DP=337;FS=1.189;HRun=1;HaplotypeScore=39.4041;InbreedingCoeff=0.2016;MQ=29.52;MQ0=20;MQRankSum=1.161;QD=4.38;ReadPosRankSum=0.696;VQSLOD=0.3030;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:23,5:19:5.95:55,6,0	./.	0/0:3,0:2:6.02:0,6,71	0/0:5,0:2:4.53:0,5,25	./.	1/1:5,1:5:5.96:50,6,0	./.	./.	1/1:16,2:15:8.76:69,9,0	1/1:6,1:6:14.63:96,15,0	./.	1/1:25,2:21:11.39:61,11,0	1/1:20,1:15:14.67:100,15,0	1/1:23,3:24:20.86:180,21,0	1/1:26,4:23:7.12:155,7,0	1/1:21,3:17:8.87:58,9,0	1/1:20,1:14:1.50:87,2,0	0/1:12,1:8:5.78:45,0,6	1/1:6,0:4:11.57:65,12,0	1/1:3,1:4:2.96:19,3,0	1/1:9,0:5:2.88:15,3,0	1/1:6,1:5:5.98:57,6,0	1/1:6,1:5:2.97:20,3,0	1/1:16,3:16:14.75:93,15,0	1/1:4,1:4:3.01:36,3,0	0/1:6,0:6:6.42:40,0,6	1/1:13,1:9:17.06:125,17,0	0/1:4,0:4:4.58:12,0,5
chr10	3589660	.	TGGA	T	218.09	PASS	AB=0.874;AC=9;AF=0.265;AN=34;BaseQRankSum=1.659;DP=210;FS=0.000;HRun=0;HaplotypeScore=34.5219;InbreedingCoeff=0.2382;MQ=16.91;MQ0=76;MQRankSum=0.483;QD=3.89;ReadPosRankSum=1.575;VQSLOD=1.2265;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:3:6.02:0,6,132	./.	./.	./.	./.	./.	./.	0/0:15,0:3:6.02:0,6,132	0/0:11,0:4:9.03:0,9,198	0/0:3,0:1:3.01:0,3,66	./.	0/0:15,0:8:9.03:0,9,198	0/0:8,0:3:3.01:0,3,66	0/0:10,0:3:9.03:0,9,198	0/0:12,1:5:6.02:0,6,132	0/1:15,0:4:0:0,0,0	1/1:0,2:2:3.01:48,3,0	0/0:9,0:5:9.03:0,9,182	0/0:11,0:1:3.01:0,3,66	./.	0/1:16,2:7:11.44:11,0,46	./.	./.	0/0:7,0:5:3.01:0,3,66	./.	0/1:8,5:7:98.79:121,0,99	1/1:1,4:5:6.02:96,6,0	1/1:2,1:2:3.01:48,3,0
chr10	3590308	.	C	CATTG	8502.35	PASS	AB=0.694;AC=14;AF=0.250;AN=56;BaseQRankSum=16.824;DP=716;FS=0.346;HRun=0;HaplotypeScore=180.3398;InbreedingCoeff=0.7037;MQ=87.88;MQ0=0;MQRankSum=-16.579;QD=49.43;ReadPosRankSum=4.193;VQSLOD=5.6336;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,9:12:13.05:630,13,0	0/0:12,0:12:33.10:0,33,653	0/0:31,0:31:90.17:0,90,1797	0/0:25,0:25:72.19:0,72,1318	0/0:32,0:32:93.31:0,93,1911	0/0:35,0:35:99:0,105,2145	0/0:36,0:36:99:0,105,2178	0/1:22,10:32:3.93:1224,0,4	0/0:35,0:35:99:0,105,2167	0/0:28,0:28:81.27:0,81,1658	0/0:20,0:20:60.21:0,60,1258	0/0:32,0:32:93.31:0,93,1895	0/0:31,0:31:93.30:0,93,1910	0/0:35,0:35:99:0,102,2122	1/1:19,21:40:49.65:2030,50,0	0/0:41,0:41:99:0,120,2371	1/1:2,8:10:12.18:593,12,0	0/1:4,1:5:9.54:101,0,10	0/0:25,0:25:75.25:0,75,1521	0/0:34,0:34:99:0,99,2032	0/0:18,0:18:54.19:0,54,1132	0/0:25,0:25:69.19:0,69,1319	0/0:24,0:24:72.25:0,72,1508	0/0:25,0:25:75.24:0,75,1518	1/1:5,15:20:39.71:1088,40,0	0/1:4,16:22:0.11:1202,0,0	1/1:5,20:25:29.98:1389,30,0	0/1:2,3:6:31.21:246,0,31
chr10	3590310	.	A	ATTCTTCCTT	18804.58	PASS	AB=0.590;AC=17;AF=0.304;AN=56;BaseQRankSum=16.739;DP=729;FS=0.318;HRun=0;HaplotypeScore=219.4522;InbreedingCoeff=0.9050;MQ=87.48;MQ0=0;MQRankSum=-16.502;QD=107.45;ReadPosRankSum=1.605;VQSLOD=5.1627;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,9:14:33.11:1311,33,0	0/0:12,0:12:33.10:0,33,944	0/0:32,0:32:84.46:0,84,2501	0/0:24,0:24:72.15:0,72,1859	0/0:33,0:33:99:0,99,2936	0/0:35,0:35:99:0,102,3173	0/0:38,0:38:99:0,108,3125	1/1:22,10:32:93.26:3293,93,0	0/0:36,0:36:99:0,102,3227	0/0:29,0:29:84.27:0,84,2544	0/0:21,0:21:63.20:0,63,1908	0/0:33,0:33:96.29:0,96,2841	0/0:32,0:32:96.30:0,96,2900	0/0:35,0:35:99:0,105,3164	1/1:19,21:40:99:4261,114,0	0/0:41,0:41:99:0,123,3569	1/1:2,8:10:30.10:1233,30,0	1/1:3,1:4:9.03:270,9,0	0/0:24,0:24:72.25:0,72,2237	0/0:35,0:35:99:0,105,3192	0/0:19,0:19:54.19:0,54,1744	0/0:26,0:26:69.22:0,69,2000	0/0:24,0:24:72.23:0,72,2265	0/0:25,0:25:75.24:0,75,2333	1/1:5,15:20:60.13:2330,60,0	0/1:7,16:23:21.10:2420,0,21	1/1:6,20:26:75.21:3055,75,0	1/1:2,4:6:18.06:632,18,0
chr10	3590432	.	T	TG	4559.97	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-12.577;DP=768;FS=8.191;HRun=4;HaplotypeScore=70.7095;InbreedingCoeff=0.9998;MQ=82.31;MQ0=1;MQRankSum=-5.422;QD=33.28;ReadPosRankSum=-2.289;VQSLOD=4.3287;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:84.20:0,84,951	0/0:14,0:14:42.08:0,42,454	0/0:22,0:22:66.19:0,66,749	0/0:22,0:22:59.68:0,60,615	0/0:26,0:26:75.21:0,75,850	0/0:40,0:39:99:0,111,1210	0/0:23,0:23:63.16:0,63,704	1/1:3,39:42:99:1494,114,0	0/0:24,0:24:60.15:0,60,670	0/0:28,0:28:72.20:0,72,809	0/0:21,0:21:63.16:0,63,705	0/0:26,0:26:72.20:0,72,816	0/0:32,0:32:93.25:0,93,1045	0/0:32,0:32:96.27:0,96,1088	0/0:41,0:40:99:0,102,1146	0/0:31,0:31:93.23:0,93,1026	1/1:0,24:25:57.18:764,57,0	0/0:11,0:10:33.05:0,33,351	0/0:27,0:27:72.20:0,72,814	0/0:38,0:38:99:0,108,1175	0/0:32,0:32:87.23:0,87,970	0/0:32,0:32:75.18:0,75,837	0/0:31,0:31:93.13:0,93,1003	0/0:27,0:27:78.21:0,78,874	0/0:21,0:21:60.14:0,60,661	1/1:3,31:34:62.27:1212,62,0	1/1:2,23:26:51.16:680,51,0	1/1:0,10:10:30.10:410,30,0
chr10	3591325	.	CGTGTGTGTGT	C	885.56	PASS	AB=0.684;AC=7;AF=0.135;AN=52;BaseQRankSum=5.842;DP=394;FS=0.000;HRun=0;HaplotypeScore=121.1168;InbreedingCoeff=0.6935;MQ=64.14;MQ0=8;MQRankSum=-2.646;QD=14.52;ReadPosRankSum=-0.023;VQSLOD=2.1002;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:27:9.03:0,9,430	0/0:6,0:7:15.05:0,15,567	./.	./.	0/0:10,0:12:24.08:0,24,995	0/0:16,0:17:24.08:0,24,1178	0/0:10,0:11:15.05:0,15,651	1/1:26,0:32:10.39:66,10,0	0/0:7,0:7:14.99:0,15,499	0/0:13,0:13:24.07:0,24,804	0/0:14,0:14:24.08:0,24,1134	0/0:8,0:7:9.03:0,9,450	0/0:10,0:10:18.06:0,18,835	0/0:12,0:12:21.07:0,21,987	0/0:8,0:8:21.07:0,21,1002	0/0:12,0:12:27.98:0,28,1311	0/0:14,0:24:16.41:0,16,161	0/0:23,0:23:42.03:0,42,1642	0/0:13,0:15:18.06:0,18,622	0/0:14,0:14:15.04:0,15,624	0/0:17,0:17:12.02:0,12,429	0/0:6,0:6:9.92:0,10,440	0/0:7,0:8:21.07:0,21,966	0/0:17,0:16:30.10:0,30,1375	0/0:6,0:6:15.05:0,15,742	0/1:7,5:13:99:411,0,120	1/1:3,3:6:9.03:270,9,0	1/1:7,3:10:9.03:270,9,0
chr10	3591453	.	C	CAT	3173.69	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=-5.685;DP=318;FS=7.614;HRun=0;HaplotypeScore=42.7220;InbreedingCoeff=0.7185;MQ=74.45;MQ0=0;MQRankSum=-0.322;QD=29.39;ReadPosRankSum=-0.295;VQSLOD=4.4432;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:66.21:0,66,821	0/0:3,0:3:6.02:0,6,74	0/1:12,0:7:9.82:10,0,32	0/0:15,0:10:3:0,3,30	0/0:11,0:11:27.09:0,27,338	0/0:14,0:14:30.10:0,30,374	0/0:8,0:8:18.04:0,18,212	1/1:11,30:41:90.25:1426,90,0	0/0:1,0:1:3.01:0,3,37	0/0:9,0:9:18.05:0,18,214	0/0:11,0:11:30.08:0,30,362	0/0:5,0:5:15.05:0,15,188	0/0:7,0:7:18.06:0,18,225	0/0:9,0:9:21.07:0,21,262	0/0:10,0:10:21.07:0,21,261	0/0:4,0:4:9.03:0,9,112	1/1:4,25:30:72.25:1187,72,0	0/0:28,0:28:72.21:0,72,886	0/0:10,0:10:21.07:0,21,263	0/0:6,0:6:18.04:0,18,212	0/0:5,0:5:12.04:0,12,150	0/0:1,0:1:3.01:0,3,38	0/0:6,0:6:18.06:0,18,225	0/0:8,0:8:21.07:0,21,263	0/0:13,0:13:30.10:0,30,375	1/1:1,4:5:12.04:197,12,0	1/1:2,10:15:27.08:422,27,0	1/1:2,2:4:6.02:99,6,0
chr10	3592761	.	GAGAC	G	3990.02	PASS	AB=0.541;AC=9;AF=0.161;AN=56;BaseQRankSum=12.085;DP=668;FS=10.753;HRun=0;HaplotypeScore=116.4700;InbreedingCoeff=0.8354;MQ=82.21;MQ0=0;MQRankSum=-6.231;QD=40.30;ReadPosRankSum=0.155;VQSLOD=3.7463;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,126,3168	0/0:8,0:8:18.06:0,18,479	0/0:19,0:19:47.97:0,48,979	0/0:26,0:25:62.82:0,63,1151	0/0:14,0:14:24.07:0,24,545	0/0:18,0:18:54.19:0,54,1438	0/0:30,0:30:90.27:0,90,2165	1/1:2,26:28:69.18:1153,69,0	0/0:32,0:32:90.30:0,90,2270	0/0:27,0:27:66.20:0,66,1638	0/0:13,0:13:36.10:0,36,775	0/0:24,0:24:69.22:0,69,1743	0/0:28,0:28:84.26:0,84,2053	0/0:29,0:29:87.28:0,87,2201	0/0:37,0:36:96.32:0,96,2466	0/0:40,0:39:99:0,117,2961	1/1:0,25:25:57.20:1059,57,0	0/0:29,1:30:31.30:0,31,2026	0/0:23,0:23:66.13:0,66,1610	0/0:17,0:17:39.12:0,39,935	0/0:32,0:32:90.29:0,90,2259	0/0:10,0:10:24.07:0,24,563	0/0:16,0:16:45.15:0,45,1191	0/0:33,0:33:93.32:0,93,2466	0/0:15,0:15:42.14:0,42,1074	0/1:3,17:20:31.15:718,0,31	1/1:2,20:22:51.17:949,51,0	1/1:0,4:4:6.02:111,6,0
chr10	3592975	.	ACGCGCGCG	A	1188.41	PASS	AB=0.879;AC=5;AF=0.089;AN=56;BaseQRankSum=4.833;DP=601;FS=6.458;HRun=0;HaplotypeScore=168.6807;InbreedingCoeff=-0.0686;MQ=70.07;MQ0=2;MQRankSum=-6.305;QD=24.25;ReadPosRankSum=-1.685;VQSLOD=2.2864;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:26.28:0,26,371	0/0:8,0:8:24.07:0,24,909	0/0:28,0:21:21.56:0,22,1329	0/0:20,0:16:8.43:0,8,425	0/0:22,0:22:60.21:0,60,2407	0/0:26,0:26:75.24:0,75,2890	0/0:23,0:23:66.14:0,66,2304	0/1:4,4:8:9.06:443,0,9	0/0:26,0:26:78.23:0,78,3004	0/0:20,0:20:57.14:0,57,1974	0/0:12,0:12:30.09:0,30,1017	0/0:40,0:40:99:0,108,4441	0/0:35,0:35:99:0,102,3918	0/0:35,0:35:99:0,102,4140	0/0:16,0:16:11.64:0,12,229	0/0:23,0:23:57.20:0,57,2413	0/1:13,0:13:99:206,0,106	0/0:16,0:15:30.86:0,31,759	0/0:21,0:21:57.18:0,57,1730	0/0:25,0:25:75.26:0,75,2985	0/0:45,0:45:99:0,129,4822	0/0:21,0:21:54.15:0,54,2058	0/0:22,0:22:63.59:0,64,2021	0/0:38,0:38:99:0,108,4362	0/0:10,0:10:3:0,3,49	0/1:6,3:9:36.19:318,0,36	0/1:11,0:11:66.90:241,0,67	0/1:7,0:7:98.01:98,0,119
chr10	3594177	.	TCTGAGGGATAAAGGAGATGGCTG	T	677.60	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.404;DP=528;FS=20.182;HRun=0;HaplotypeScore=308.5768;InbreedingCoeff=0.9668;MQ=82.03;MQ0=0;MQRankSum=-3.394;QD=96.80;ReadPosRankSum=1.886;VQSLOD=1.6726;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,102,9678	0/0:11,0:11:33.11:0,33,3234	0/0:17,0:18:45.14:0,45,2176	0/0:13,0:13:30.07:0,30,1433	0/0:15,0:15:45.15:0,45,3993	0/0:17,0:17:51.18:0,51,4517	0/0:13,0:13:36.12:0,36,3016	0/0:31,0:31:90.29:0,90,6970	0/0:17,0:17:51.18:0,51,5056	0/0:19,0:19:57.20:0,57,5059	0/0:20,0:20:60.21:0,60,6091	0/0:13,0:13:39.13:0,39,3652	0/0:19,0:19:54.19:0,54,5509	0/0:21,0:21:63.20:0,63,5733	0/0:22,0:22:63.22:0,63,5711	0/0:22,0:22:66.23:0,66,6388	1/1:3,4:7:12.04:764,12,0	0/0:24,0:24:72.25:0,72,6702	0/0:17,0:17:48.16:0,48,3747	0/0:11,0:11:33.11:0,33,3189	0/0:26,0:26:75.26:0,75,6837	0/0:17,0:17:51.18:0,51,5583	0/0:20,0:20:57.20:0,57,6047	0/0:17,0:17:51.11:0,51,4786	0/0:26,0:26:75.26:0,75,5975	0/0:25,0:25:75.25:0,75,6878	0/0:20,0:20:60.21:0,60,5349	0/0:11,0:11:30.10:0,30,2990
chr10	3595671	.	TGCGTAA	T	2035.58	PASS	AB=0.889;AC=8;AF=0.148;AN=54;BaseQRankSum=7.525;DP=579;FS=35.051;HRun=0;HaplotypeScore=130.1249;InbreedingCoeff=0.4091;MQ=55.03;MQ0=14;MQRankSum=-6.330;QD=17.11;ReadPosRankSum=-1.347;VQSLOD=1.3684;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:31.52:0,32,1339	0/0:9,0:9:24.08:0,24,737	0/0:45,0:14:28.55:0,29,526	0/0:45,0:17:45.12:0,45,775	0/0:26,0:26:46.53:0,47,1562	0/0:16,0:16:45.12:0,45,1052	0/0:20,0:20:56.83:0,57,1457	1/1:0,17:18:54.15:1049,54,0	0/0:20,0:20:4.15:0,4,783	0/0:19,0:19:35.32:0,35,1493	0/0:16,0:16:42.14:0,42,1103	0/0:13,0:12:27.45:0,27,478	0/0:16,0:16:48:0,48,1261	0/0:17,0:17:14.57:0,15,810	0/0:13,0:13:23.52:0,24,775	0/0:20,0:20:53.85:0,54,1507	0/1:24,0:24:15.52:275,0,16	0/0:19,0:19:27.98:0,28,876	0/1:22,0:21:10.85:11,0,1383	0/0:22,0:22:60.18:0,60,1562	0/0:23,0:23:62.59:0,63,1399	0/0:13,0:13:36.11:0,36,1031	0/0:17,0:17:51.18:0,51,1462	0/0:26,0:26:68.76:0,69,2118	0/1:25,0:25:7.63:8,0,1379	0/1:3,11:14:59.88:488,0,60	1/1:8,1:15:24.07:349,24,0	./.
chr10	3595673	.	CGTAA	C	1483.99	PASS	AB=1.000;AC=7;AF=0.130;AN=54;BaseQRankSum=9.109;DP=579;FS=38.050;HRun=0;HaplotypeScore=114.0049;InbreedingCoeff=0.4875;MQ=53.16;MQ0=14;MQRankSum=-4.581;QD=15.96;ReadPosRankSum=-0.511;VQSLOD=1.4979;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:62.75:0,63,980	0/0:9,0:9:24.08:0,24,581	0/0:40,0:11:14.42:0,14,350	0/0:45,0:17:41.24:0,41,516	0/0:26,0:26:63:0,63,1146	0/0:18,0:18:34.80:0,35,761	0/0:21,0:21:58.47:0,58,992	1/1:18,0:18:51.17:694,51,0	0/1:20,0:20:10.55:11,0,374	0/0:20,0:20:52.69:0,53,1192	0/0:15,0:15:42.14:0,42,793	0/0:13,0:12:11.91:0,12,334	0/0:15,0:15:44.98:0,45,877	0/0:17,0:17:29.79:0,30,573	0/0:13,0:13:29.81:0,30,478	0/0:20,0:20:54.01:0,54,1144	0/1:25,0:25:10.86:174,0,11	0/0:19,0:19:5.70:0,6,638	0/0:21,0:20:8.90:0,9,987	0/0:22,0:22:54.18:0,54,1076	0/0:23,0:23:55.96:0,56,1002	0/0:15,0:15:36.11:0,36,712	0/0:17,0:17:51.17:0,51,1126	0/0:28,0:28:75.03:0,75,1761	0/0:25,0:25:21.21:0,21,1082	0/1:15,0:14:49.30:365,0,49	1/1:7,8:15:24.08:380,24,0	./.
chr10	3595675	.	TAA	T	1334.36	PASS	AB=0.889;AC=7;AF=0.130;AN=54;BaseQRankSum=9.179;DP=572;FS=38.786;HRun=2;HaplotypeScore=95.5886;InbreedingCoeff=0.7376;MQ=53.20;MQ0=15;MQRankSum=-5.207;QD=18.79;ReadPosRankSum=-0.632;VQSLOD=-0.7143;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:31.77:0,32,785	0/0:9,0:9:24.01:0,24,434	0/0:36,0:9:14.42:0,14,331	0/0:44,0:16:41.24:0,41,492	0/0:26,0:26:66.21:0,66,1105	0/0:18,0:18:47.45:0,47,699	0/0:22,0:22:48.36:0,48,927	1/1:17,1:18:54.14:693,54,0	0/0:21,0:21:54.30:0,54,687	0/0:19,0:19:52.69:0,53,981	0/0:15,0:15:42.14:0,42,726	0/0:14,0:13:9.62:0,10,316	0/0:15,0:15:44.44:0,44,684	0/0:18,0:18:17.12:0,17,550	0/0:12,0:12:4.29:0,4,316	0/0:20,0:20:53.97:0,54,953	1/1:16,6:22:23.93:246,24,0	0/0:19,0:19:25.17:0,25,547	0/0:21,0:20:3.87:0,4,869	0/0:20,0:20:54.18:0,54,908	0/0:23,0:23:60.51:0,61,913	0/0:16,0:16:38.11:0,38,610	0/0:17,0:17:51.17:0,51,947	0/0:27,1:28:73.16:0,73,1357	0/0:24,0:24:21.23:0,21,839	0/1:14,2:14:28.37:277,0,28	1/1:9,6:15:23.98:265,24,0	./.
chr10	3595676	.	AAGTG	A	825.79	PASS	AB=0.957;AC=8;AF=0.148;AN=54;BaseQRankSum=10.073;DP=578;FS=21.198;HRun=0;HaplotypeScore=115.2781;InbreedingCoeff=0.4206;MQ=53.26;MQ0=15;MQRankSum=-4.602;QD=7.44;ReadPosRankSum=0.143;VQSLOD=1.2137;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:56.47:0,56,739	0/0:9,0:9:24.07:0,24,598	0/0:37,0:9:13.06:0,13,204	0/0:44,0:16:11.54:0,12,266	0/0:26,0:26:65.92:0,66,953	0/0:18,0:18:17.78:0,18,661	0/0:22,0:22:42.23:0,42,877	1/1:18,0:18:34.37:325,34,0	0/1:21,0:21:99:170,0,170	0/0:19,0:19:56.97:0,57,1081	0/0:15,0:15:42.03:0,42,541	0/0:14,0:13:25.35:0,25,271	0/0:15,0:15:45.13:0,45,908	0/0:19,0:19:21.13:0,21,393	0/0:12,0:12:30.06:0,30,463	0/0:21,0:21:53.33:0,53,1050	0/1:22,0:22:55.81:56,0,76	0/1:15,4:19:4.89:5,0,492	0/0:21,0:20:41.95:0,42,760	0/0:22,0:22:57.06:0,57,908	0/0:23,0:23:27.65:0,28,756	0/0:15,0:15:39.06:0,39,660	0/0:18,0:18:54.04:0,54,977	0/0:28,0:28:75:0,75,1819	0/0:25,0:25:33.36:0,33,1010	0/1:16,0:14:52.09:180,0,52	1/1:15,0:15:23.84:234,24,0	./.
chr10	3595677	.	A	AGT	1316.81	PASS	AB=0.820;AC=16;AF=0.320;AN=50;BaseQRankSum=-0.023;DP=596;FS=2.133;HRun=0;HaplotypeScore=107.7642;InbreedingCoeff=0.4265;MQ=53.24;MQ0=15;MQRankSum=-2.040;QD=5.85;ReadPosRankSum=-1.342;VQSLOD=2.7586;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:20,4:38:12.21:164,12,0	0/0:8,0:9:20.89:0,21,212	./.	./.	0/0:27,0:27:24.05:0,24,256	0/0:14,0:18:26.56:0,27,232	0/0:18,0:23:32.25:0,32,268	1/1:22,0:22:11:85,11,0	0/0:8,0:21:30.81:0,31,146	0/0:19,0:19:27.06:0,27,292	0/0:15,0:15:6.02:0,6,66	1/1:7,7:13:12.04:179,12,0	0/1:11,4:15:99:156,0,108	0/1:13,7:21:2.07:120,0,2	0/1:10,4:15:43.51:185,0,44	0/0:22,0:22:27.05:0,27,289	1/1:23,0:23:10.29:51,10,0	0/1:18,1:20:56.37:56,0,60	0/0:21,0:20:14.88:0,15,135	0/0:19,0:22:14.91:0,15,165	0/0:22,0:23:17.47:0,17,179	0/0:14,0:17:20.66:0,21,184	0/0:18,0:18:24.06:0,24,264	0/0:26,0:28:62.84:0,63,656	0/1:14,12:26:29.96:415,0,30	0/1:16,0:14:24.85:25,0,38	1/1:15,0:15:9.37:52,9,0	./.
chr10	3596221	.	GAGA	G	3150.91	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=11.416;DP=645;FS=4.224;HRun=0;HaplotypeScore=94.9011;InbreedingCoeff=0.9572;MQ=77.08;MQ0=0;MQRankSum=-3.082;QD=31.20;ReadPosRankSum=0.546;VQSLOD=3.7371;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:81.28:0,81,1689	0/0:8,0:8:21.07:0,21,447	0/0:25,0:24:48.70:0,49,891	0/0:24,0:23:35.01:0,35,696	0/0:19,0:19:48.16:0,48,1008	0/0:14,0:14:39.13:0,39,832	0/0:20,0:20:45.15:0,45,921	1/1:10,16:26:45.15:682,45,0	0/0:27,0:27:66.23:0,66,1388	0/0:16,0:16:42.14:0,42,896	0/0:19,0:19:47.85:0,48,984	0/0:29,0:29:78.25:0,78,1549	0/0:38,0:38:99:0,99,1957	0/0:40,0:40:99:0,102,2152	0/0:31,0:31:87.29:0,87,1792	0/0:30,0:30:84.29:0,84,1792	1/1:3,23:26:63.21:966,63,0	0/0:27,0:27:63.22:0,63,1298	0/0:21,0:21:54.18:0,54,1128	0/0:21,0:21:54.18:0,54,1088	0/0:29,0:29:78.25:0,78,1571	0/0:18,0:18:42.13:0,42,810	0/0:13,0:13:33.11:0,33,684	0/0:29,0:29:78.27:0,78,1597	0/0:13,0:13:33.09:0,33,639	1/1:2,14:16:42.13:613,42,0	1/1:2,27:29:66.22:1012,66,0	1/1:0,4:4:3.01:46,3,0
chr10	3598078	.	T	TA	694.48	PASS	AC=8;AF=0.148;AN=54;BaseQRankSum=10.446;DP=818;FS=0.635;HRun=2;HaplotypeScore=102.9554;InbreedingCoeff=0.9252;MQ=67.10;MQ0=1;MQRankSum=-9.345;QD=13.62;ReadPosRankSum=0.327;VQSLOD=2.7961;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:60,0:59:99:0,165,2254	0/0:8,0:8:24.07:0,24,320	0/0:17,0:14:39.04:0,39,489	0/0:18,1:14:32.27:0,32,350	0/0:27,0:27:78.24:0,78,1070	0/0:24,0:23:69.21:0,69,946	0/0:43,0:43:99:0,126,1691	./.	0/0:36,0:36:99:0,102,1406	0/0:37,0:37:99:0,111,1550	0/0:18,0:18:48.14:0,48,653	0/0:60,0:60:99:0,178,2424	0/0:37,0:37:99:0,111,1513	0/0:45,0:45:99:0,135,1867	0/0:48,0:48:99:0,141,1946	0/0:37,0:37:99:0,108,1460	1/1:2,12:14:7.43:152,7,0	0/0:27,0:27:81.19:0,81,1086	0/0:21,0:21:60.17:0,60,788	0/0:33,0:33:99:0,99,1353	0/0:44,0:44:99:0,129,1760	0/0:33,0:33:99:0,99,1357	0/0:21,0:21:63.21:0,63,877	0/0:41,0:40:99:0,120,1588	0/0:27,0:27:78.26:0,78,1089	1/1:3,13:16:38.99:333,39,0	1/1:2,13:15:29.96:250,30,0	1/1:2,4:6:3.16:104,3,0
chr10	3598080	.	C	CA	611.79	PASS	AB=0.563;AC=5;AF=0.093;AN=54;BaseQRankSum=9.920;DP=816;FS=2.192;HRun=0;HaplotypeScore=103.8697;InbreedingCoeff=0.3587;MQ=65.99;MQ0=1;MQRankSum=-9.255;QD=12.24;ReadPosRankSum=0.673;VQSLOD=4.2959;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:59,0:58:99:0,171,2317	0/0:8,0:8:24.05:0,24,316	0/0:16,0:13:39.09:0,39,508	0/0:17,0:13:29.23:0,29,395	0/0:28,0:28:81.26:0,81,1116	0/0:24,0:23:72.23:0,72,990	0/0:42,0:42:99:0,126,1709	./.	0/0:36,0:36:99:0,108,1477	0/0:37,0:37:99:0,111,1546	0/0:18,0:18:54.15:0,54,707	0/0:59,0:59:99:0,175,2417	0/0:37,0:37:99:0,108,1506	0/0:46,0:46:99:0,135,1867	0/0:47,0:47:99:0,138,1928	0/0:37,0:37:99:0,111,1486	0/1:2,12:14:19.87:116,0,20	0/0:27,0:27:81.21:0,81,1092	0/0:20,0:20:57.18:0,57,782	0/0:33,0:33:99:0,99,1360	0/0:46,0:46:99:0,129,1779	0/0:33,0:33:96.32:0,96,1340	0/0:23,0:23:63.21:0,63,878	0/0:41,0:40:99:0,120,1601	0/0:27,0:27:78.26:0,78,1091	0/1:3,13:16:29.61:285,0,30	1/1:1,13:14:29.96:250,30,0	0/1:2,4:6:12.72:85,0,13
chr10	3598126	.	C	CCA	448.80	PASS	AB=0.750;AC=7;AF=0.130;AN=54;BaseQRankSum=4.482;DP=823;FS=0.000;HRun=0;HaplotypeScore=93.1806;InbreedingCoeff=0.6260;MQ=57.25;MQ0=57;MQRankSum=-5.747;QD=13.60;ReadPosRankSum=-2.226;VQSLOD=3.0939;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,146,2100	0/0:19,0:19:54.18:0,54,773	0/0:28,0:2:4.83:0,5,40	0/0:33,0:2:2.84:0,3,14	0/0:22,0:22:57.19:0,57,808	0/0:20,0:19:54.17:0,54,756	0/0:39,0:39:99:0,111,1551	1/1:11,13:11:19.98:357,20,0	0/0:40,0:40:99:0,117,1668	0/0:31,0:29:72.24:0,72,1032	0/0:21,0:21:57.18:0,57,798	0/0:55,0:55:99:0,157,2234	0/0:40,0:40:99:0,114,1572	0/0:49,0:49:99:0,138,1974	0/0:39,0:39:99:0,102,1445	0/0:42,0:42:99:0,120,1685	0/1:4,2:6:28.63:147,0,29	0/0:20,0:20:57.19:0,57,809	0/0:29,0:16:45.15:0,45,640	0/0:29,0:29:84.27:0,84,1181	0/0:64,1:62:99:0,166,2322	0/0:27,0:27:72.23:0,72,1012	0/0:25,0:25:69.20:0,69,952	0/0:41,0:41:99:0,123,1703	0/0:25,0:25:66.21:0,66,928	1/1:0,1:1:3.01:55,3,0	1/1:2,0:2:2.88:15,3,0	./.
chr10	3598224	.	CTG	C	652.32	PASS	AB=0.797;AC=5;AF=0.089;AN=56;BaseQRankSum=6.702;DP=913;FS=1.499;HRun=0;HaplotypeScore=123.3394;InbreedingCoeff=-0.1009;MQ=56.78;MQ0=43;MQRankSum=-1.174;QD=4.05;ReadPosRankSum=-2.060;VQSLOD=2.3519;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:47:99:0,132,2230	0/0:15,0:15:42.12:0,42,716	0/0:35,0:9:9.40:0,9,359	0/0:34,0:12:13.93:0,14,342	0/0:27,0:27:69.24:0,69,1224	0/0:20,0:20:48.16:0,48,864	0/0:24,0:24:66.19:0,66,1119	0/1:39,4:29:41.83:42,0,1038	0/0:50,0:50:99:0,138,2462	0/0:32,0:31:87.30:0,87,1560	0/0:13,0:13:33.10:0,33,565	0/0:54,0:54:99:0,160,2846	0/0:39,0:39:99:0,114,1990	0/0:41,0:41:99:0,117,2094	0/0:34,0:34:93.31:0,93,1640	0/0:36,0:36:96.33:0,96,1722	0/1:30,8:28:19.41:19,0,1020	0/0:19,0:19:57.18:0,57,965	0/0:18,0:18:45.15:0,45,800	0/0:32,0:32:81.28:0,81,1458	0/0:79,0:77:99:0,202,3589	0/0:24,0:24:60.18:0,60,1048	0/0:26,0:25:69.24:0,69,1242	0/0:37,0:36:96.31:0,96,1698	0/0:15,0:15:42.14:0,42,756	0/1:22,16:30:99:459,0,637	0/1:17,11:25:99:162,0,527	0/1:11,3:13:87.02:87,0,464
chr10	3598726	.	ATC	A	997.32	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.538;DP=714;FS=0.000;HRun=0;HaplotypeScore=85.0837;InbreedingCoeff=0.9919;MQ=90.70;MQ0=0;MQRankSum=-3.434;QD=32.17;ReadPosRankSum=1.666;VQSLOD=5.5030;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:96.33:0,96,1716	0/0:7,0:7:18.06:0,18,324	0/0:27,0:27:69.24:0,69,1212	0/0:29,0:29:72.03:0,72,1252	0/0:25,0:25:72.25:0,72,1282	0/0:23,0:23:66.23:0,66,1189	0/0:31,0:30:93.28:0,93,1606	0/0:28,0:28:81.27:0,81,1402	0/0:31,0:31:84.29:0,84,1503	0/0:28,0:28:81.26:0,81,1397	0/0:25,0:25:69.24:0,69,1238	0/0:26,0:26:78.27:0,78,1399	0/0:34,0:34:96.33:0,96,1720	0/0:26,0:26:69.24:0,69,1242	0/0:27,0:26:75.26:0,75,1351	0/0:46,0:46:99:0,123,2215	1/1:1,30:31:78.26:1092,78,0	0/0:22,0:22:63.22:0,63,1134	0/0:14,0:14:36.12:0,36,648	0/0:23,0:23:69.24:0,69,1238	0/0:21,0:21:54.17:0,54,938	0/0:26,0:26:72.21:0,72,1211	0/0:20,0:20:54.19:0,54,972	0/0:26,0:26:78.27:0,78,1388	0/0:20,0:20:60.21:0,60,1081	0/0:21,0:21:60.19:0,60,1027	0/0:28,0:28:78.27:0,78,1388	0/0:15,0:15:45.15:0,45,803
chr10	3599163	.	GCCCTT	G	70.85	PASS	AB=1.000;AC=4;AF=0.074;AN=54;BaseQRankSum=6.370;DP=406;FS=6.329;HRun=0;HaplotypeScore=75.9634;InbreedingCoeff=0.1126;MQ=85.27;MQ0=42;MQRankSum=1.603;QD=0.59;ReadPosRankSum=-2.121;VQSLOD=0.2669;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:23.34:0,23,182	0/0:1,0:1:3:0,3,25	0/0:37,0:11:12.81:0,13,91	0/1:90,0:39:37.71:38,0,209	0/0:4,0:3:5.99:0,6,50	0/0:10,0:10:29.59:0,30,302	0/0:28,0:24:67.94:0,68,536	0/0:9,0:8:2.28:0,2,90	0/0:9,0:9:26.94:0,27,226	0/0:3,0:3:8.91:0,9,74	./.	0/0:18,0:18:41.92:0,42,444	0/0:12,0:12:26.98:0,27,269	0/0:12,0:12:23.72:0,24,207	0/0:6,0:6:15.02:0,15,226	0/0:6,0:6:12.02:0,12,199	1/1:8,17:25:1.05:120,1,0	0/0:23,0:23:60.50:0,60,755	0/0:5,0:5:7.19:0,7,49	0/0:1,0:1:3.01:0,3,37	0/0:31,0:29:59.84:0,60,519	0/0:2,0:2:2.90:0,3,16	0/0:4,0:3:8.99:0,9,74	0/0:28,0:28:68.77:0,69,760	0/0:6,0:6:11.96:0,12,117	0/0:9,0:8:21.02:0,21,193	0/0:6,0:6:14.81:0,15,113	0/1:5,0:4:6.93:7,0,86
chr10	3599366	.	G	GCCCCTT	396.25	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-1.271;DP=278;FS=10.715;HRun=0;HaplotypeScore=56.6557;InbreedingCoeff=0.5933;MQ=74.38;MQ0=13;MQRankSum=-4.682;QD=28.30;ReadPosRankSum=0.095;VQSLOD=2.0382;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:69.15:0,69,1361	0/0:2,0:2:6.02:0,6,111	0/0:18,0:7:9.44:0,9,78	0/0:32,0:10:10.01:0,10,50	0/0:4,0:4:12.04:0,12,265	0/0:4,0:4:6.02:0,6,132	0/0:19,0:19:30.09:0,30,822	0/0:4,0:4:9.02:0,9,121	0/0:12,0:12:26.91:0,27,353	0/0:11,0:11:30.08:0,30,618	0/0:8,0:8:24.07:0,24,488	0/0:6,0:6:12.03:0,12,203	0/0:16,0:16:45.10:0,45,862	0/0:11,0:11:27.09:0,27,593	1/1:0,6:7:9.03:306,9,0	0/0:15,0:15:38.58:0,39,752	0/0:7,0:7:18.06:0,18,375	1/1:1,2:3:2.36:101,2,0	0/0:5,0:4:9.03:0,9,175	0/0:3,0:3:8.99:0,9,152	0/0:23,0:22:45.15:0,45,925	0/0:3,0:3:9.03:0,9,178	0/0:8,0:8:15.05:0,15,283	0/0:8,0:8:18.06:0,18,341	1/1:1,3:4:3.01:102,3,0	0/0:5,0:5:12.03:0,12,223	0/0:13,0:13:35.71:0,36,694	0/0:1,0:1:3.01:0,3,46
chr10	3600464	.	T	TG	5070.11	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=16.497;DP=760;FS=11.564;HRun=1;HaplotypeScore=89.3340;InbreedingCoeff=0.9916;MQ=65.33;MQ0=1;MQRankSum=-5.485;QD=38.70;ReadPosRankSum=-1.824;VQSLOD=3.5890;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,114,1554	0/0:14,0:14:42.13:0,42,567	0/0:28,0:25:69.22:0,69,936	0/0:25,0:25:75.18:0,75,989	0/0:24,0:24:69.21:0,69,943	0/0:26,0:26:78.26:0,78,1090	0/0:21,0:21:63.18:0,63,831	1/1:0,45:44:99:1820,132,0	0/0:28,0:28:84.27:0,84,1156	0/0:35,0:35:99:0,102,1369	0/0:20,0:20:60.20:0,60,833	0/0:19,0:19:57.18:0,57,778	0/0:33,0:33:99:0,99,1329	0/0:40,0:40:99:0,117,1557	0/0:40,0:40:99:0,120,1641	0/0:24,0:24:72.22:0,72,985	1/1:5,15:20:13.96:652,14,0	0/0:26,0:26:75.17:0,75,1004	0/0:18,0:18:51.17:0,51,713	0/0:29,0:29:87.29:0,87,1215	0/0:24,0:24:69.20:0,69,944	0/0:29,0:29:87.29:0,87,1216	0/0:28,0:28:78.26:0,78,1090	0/0:38,0:38:99:0,114,1552	0/0:22,0:22:66.21:0,66,904	1/1:0,21:21:63.21:926,63,0	1/1:0,35:35:99:1446,99,0	1/1:0,10:10:15.05:227,15,0
chr10	3600916	.	ACCTCCGTCAGAACCCAGGAGCCTGGGCCC	A	671.69	PASS	AB=0.950;AC=6;AF=0.111;AN=54;BaseQRankSum=5.466;DP=602;FS=11.286;HRun=0;HaplotypeScore=389.4735;InbreedingCoeff=-0.0119;MQ=55.66;MQ0=17;MQRankSum=-2.549;QD=2.46;ReadPosRankSum=-3.813;VQSLOD=-0.1081;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/0:8,0:7:18.06:0,18,523	0/1:14,0:8:0:0,0,0	0/0:7,0:3:8.18:0,8,63	0/0:14,0:11:24.05:0,24,751	0/0:20,0:19:45.14:0,45,1479	0/0:30,0:30:66.23:0,66,1796	0/1:49,0:27:4.76:5,0,286	0/0:15,0:15:33.11:0,33,1166	0/0:7,0:7:18.04:0,18,726	0/0:6,0:6:12.04:0,12,271	0/0:18,0:18:36.12:0,36,1337	0/0:14,0:13:32.78:0,33,969	0/0:22,0:22:48.16:0,48,2121	0/0:17,0:17:39.11:0,39,1217	0/0:10,0:10:24.08:0,24,617	0/1:96,0:86:99:104,0,2876	0/0:33,0:33:84.29:0,84,3059	0/0:9,0:9:15.01:0,15,623	0/0:7,0:6:9:0,9,191	0/0:47,0:46:90.27:0,90,2812	0/0:5,0:5:9.03:0,9,221	0/0:5,0:5:9.03:0,9,255	0/0:19,0:19:51.17:0,51,1974	0/0:16,0:16:24.08:0,24,1059	0/1:30,22:43:99:372,0,486	0/1:43,0:27:99:216,0,489	0/1:19,0:16:69.97:86,0,70
chr10	3602640	.	GGT	G	1924.98	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.136;DP=683;FS=3.570;HRun=0;HaplotypeScore=99.4047;InbreedingCoeff=0.9969;MQ=87.59;MQ0=1;MQRankSum=-3.599;QD=40.96;ReadPosRankSum=2.010;VQSLOD=5.2147;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,117,2163	0/0:11,0:11:30.08:0,30,543	0/0:22,0:22:66.21:0,66,1169	0/0:28,0:28:81.20:0,81,1429	0/0:20,0:20:60.19:0,60,1124	0/0:18,0:18:54.19:0,54,1043	0/0:29,0:29:84.29:0,84,1612	0/0:34,0:34:96.32:0,96,1730	0/0:22,0:22:66.20:0,66,1195	0/0:20,0:20:60.21:0,60,1128	0/0:13,0:13:39.13:0,39,737	0/0:29,0:29:87.30:0,87,1680	0/0:31,0:31:93.31:0,93,1751	0/0:29,0:29:87.28:0,87,1644	0/0:38,0:38:99:0,108,2086	0/0:24,0:24:72.23:0,72,1345	0/0:28,0:28:81.28:0,81,1504	0/0:30,0:30:87.30:0,87,1609	0/0:26,0:26:75.22:0,75,1386	0/0:31,0:31:90.29:0,90,1701	0/0:40,0:40:99:0,117,2209	0/0:16,0:16:48.15:0,48,894	0/0:14,0:14:39.13:0,39,741	0/0:28,0:28:84.29:0,84,1610	0/0:16,0:16:48.16:0,48,872	1/1:0,21:21:63.21:965,63,0	1/1:0,19:18:54.18:826,54,0	1/1:0,7:7:18.06:276,18,0
chr10	3603080	.	G	GCTTT	1339.22	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=5.443;DP=453;FS=0.719;HRun=0;HaplotypeScore=89.9148;InbreedingCoeff=0.9778;MQ=79.80;MQ0=1;MQRankSum=-0.642;QD=26.26;ReadPosRankSum=1.711;VQSLOD=3.1935;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,105,1675	0/0:6,0:6:18.06:0,18,320	0/0:19,0:18:36.82:0,37,751	0/0:24,0:22:37.30:0,37,694	0/0:9,0:9:27.06:0,27,459	0/0:22,0:22:63.19:0,63,1145	0/0:25,0:25:72.23:0,72,1290	0/0:20,0:20:55.37:0,55,835	0/0:7,0:7:21.03:0,21,346	0/0:16,0:16:48.14:0,48,807	0/0:10,0:10:23.95:0,24,355	0/0:15,0:15:45.15:0,45,863	0/0:12,0:12:32.45:0,32,510	0/0:17,0:17:45.14:0,45,780	1/1:15,6:21:26.26:537,26,0	0/0:18,0:18:54.16:0,54,934	0/0:14,0:14:42.14:0,42,755	1/1:1,12:14:18.06:434,18,0	0/0:13,0:13:39.10:0,39,580	0/0:12,0:12:32.27:0,32,586	0/0:35,0:35:99:0,99,1805	0/0:12,0:12:36.10:0,36,590	0/0:9,0:9:27.09:0,27,518	0/0:9,0:9:27.09:0,27,496	1/1:3,13:16:20.91:509,21,0	0/0:15,0:15:36.11:0,36,574	0/0:21,0:21:60.19:0,60,991	0/0:4,0:4:12.03:0,12,178
chr10	3603083	.	TTCCCTCCC	T	2419.49	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=7.159;DP=452;FS=14.210;HRun=0;HaplotypeScore=121.0616;InbreedingCoeff=0.9369;MQ=76.36;MQ0=1;MQRankSum=-6.723;QD=42.45;ReadPosRankSum=-0.045;VQSLOD=2.7710;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:77.92:0,78,2950	0/0:7,0:7:15.04:0,15,514	0/0:18,0:18:14.15:0,14,438	0/0:21,0:19:24.22:0,24,756	0/0:10,0:10:24.08:0,24,909	0/0:22,0:22:54.19:0,54,2246	0/0:24,0:24:42.14:0,42,1693	1/1:8,12:20:36:577,36,0	0/0:7,0:7:18.06:0,18,750	0/0:16,0:16:27.09:0,27,1132	0/0:12,0:12:17.39:0,17,753	0/0:16,0:16:42.14:0,42,1684	0/0:11,0:11:21.07:0,21,845	0/0:16,0:16:30.10:0,30,1185	0/0:20,0:20:39.12:0,39,1158	0/0:19,0:19:39.12:0,39,1451	0/0:14,0:14:30.10:0,30,1132	0/0:15,0:14:27.09:0,27,940	0/0:12,0:12:12.04:0,12,427	0/0:14,0:14:30.99:0,31,1183	0/0:34,0:34:78.27:0,78,3036	0/0:12,0:12:15.04:0,15,523	0/0:10,0:10:24.08:0,24,997	0/0:9,0:9:18.06:0,18,734	0/0:17,0:17:30.09:0,30,914	1/1:3,10:13:30.10:744,30,0	1/1:5,15:20:42.14:1096,42,0	1/1:2,2:4:6.02:157,6,0
chr10	3603658	.	AACCTGTGT	A	14059.95	PASS	AB=0.512;AC=17;AF=0.304;AN=56;BaseQRankSum=17.509;DP=641;FS=0.000;HRun=0;HaplotypeScore=170.7147;InbreedingCoeff=0.9148;MQ=89.57;MQ0=0;MQRankSum=-16.203;QD=74.39;ReadPosRankSum=-0.265;VQSLOD=4.2349;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,35:35:78.27:2198,78,0	0/0:11,0:11:33.11:0,33,1431	0/0:32,0:32:81.33:0,81,3799	0/0:22,0:22:60.17:0,60,2238	0/0:24,0:24:72.25:0,72,3211	0/0:16,0:16:48.16:0,48,1968	0/0:32,0:32:96.30:0,96,3836	1/1:0,37:37:99:2816,111,0	0/0:24,0:24:72.25:0,72,3323	0/0:27,0:27:81.27:0,81,3590	0/0:19,0:19:57.18:0,57,2509	0/0:31,0:31:93.31:0,93,3989	0/0:28,0:28:84.29:0,84,3662	0/0:26,0:26:78.27:0,78,3508	1/1:0,19:19:54.19:1597,54,0	0/0:20,0:20:60.21:0,60,2681	1/1:0,17:17:42.14:1235,42,0	1/1:0,15:15:36.12:1089,36,0	0/0:23,0:23:63.18:0,63,2650	0/0:26,0:26:78.27:0,78,3489	0/0:36,0:36:99:0,108,4562	0/0:16,0:16:48.16:0,48,2209	0/0:21,0:21:63.22:0,63,2916	0/0:18,0:18:54.19:0,54,2387	1/1:0,17:17:45.15:1293,45,0	0/1:1,20:21:75.57:1661,0,76	1/1:0,17:18:51.18:1542,51,0	1/1:0,10:10:21.07:629,21,0
chr10	3604688	.	A	AAAC	8160.37	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-15.056;DP=765;FS=2.996;HRun=0;HaplotypeScore=103.3374;InbreedingCoeff=0.9659;MQ=68.90;MQ0=1;MQRankSum=-1.732;QD=42.50;ReadPosRankSum=-0.778;VQSLOD=6.2043;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:74.91:0,75,656	0/0:9,0:9:27.09:0,27,390	0/0:17,0:16:30.09:0,30,404	0/0:25,0:24:44.48:0,44,568	0/0:37,0:37:93.24:0,93,1296	0/0:30,0:30:75.23:0,75,1044	0/0:20,0:20:42.13:0,42,581	1/1:13,24:37:53.20:1240,53,0	0/0:27,0:27:69.22:0,69,980	0/0:29,0:29:69.19:0,69,972	0/0:25,0:25:66.20:0,66,918	0/0:34,0:34:81.26:0,81,1152	0/0:31,0:31:78.25:0,78,1110	0/0:33,0:33:81.25:0,81,1134	1/1:6,30:37:81.28:1584,81,0	0/0:26,0:26:69.22:0,69,980	0/0:24,0:24:66.22:0,66,942	1/1:1,9:10:18.06:343,18,0	0/0:30,0:30:69.23:0,69,974	0/0:34,0:34:78.23:0,78,1087	0/0:22,0:22:57.17:0,57,786	0/0:24,0:24:66.19:0,66,916	0/0:23,0:23:60.19:0,60,848	0/0:38,0:38:87.27:0,87,1207	1/1:7,30:37:81.28:1632,81,0	1/1:4,28:33:87.11:1581,87,0	1/1:7,30:37:84.29:1719,84,0	1/1:0,1:1:3.01:61,3,0
chr10	3605429	.	CTCCCTT	C	7214.83	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=14.762;DP=665;FS=4.540;HRun=0;HaplotypeScore=139.3134;InbreedingCoeff=0.9975;MQ=62.70;MQ0=0;MQRankSum=-10.849;QD=31.78;ReadPosRankSum=1.239;VQSLOD=4.6709;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,26:29:20.95:401,21,0	0/0:7,0:7:18.06:0,18,604	0/0:24,0:18:46.54:0,47,1089	0/0:25,0:19:42.09:0,42,806	0/0:30,0:30:84.15:0,84,2162	0/0:26,0:26:78.20:0,78,2363	0/0:22,0:22:66.09:0,66,1576	1/1:5,23:28:67.15:680,67,0	0/0:28,0:28:79.90:0,80,2295	0/0:25,0:25:69.05:0,69,1836	0/0:22,0:22:66.19:0,66,1888	0/0:25,0:25:75.22:0,75,2357	0/0:28,0:28:81.23:0,81,2409	0/0:20,0:20:60.17:0,60,1763	1/1:0,29:29:51.18:1171,51,0	0/0:18,0:18:54.19:0,54,1885	1/1:3,21:24:24:483,24,0	1/1:0,17:17:30.10:690,30,0	0/0:24,0:23:57.10:0,57,1439	0/0:18,0:18:45.12:0,45,1340	0/0:28,0:28:78.19:0,78,2161	0/0:21,0:21:60.17:0,60,1770	0/0:19,0:19:57.17:0,57,1733	0/0:27,0:27:66.19:0,66,1966	1/1:3,27:30:35.99:681,36,0	1/1:2,23:25:66.13:1200,66,0	1/1:3,28:31:56.44:1308,56,0	1/1:4,10:14:27.09:602,27,0
chr10	3607958	.	CATT	C	4627.74	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=11.741;DP=821;FS=4.273;HRun=0;HaplotypeScore=115.7558;InbreedingCoeff=0.9977;MQ=64.24;MQ0=0;MQRankSum=-0.248;QD=44.07;ReadPosRankSum=5.272;VQSLOD=6.5731;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,50:50:99:2121,126,0	0/0:14,0:14:36.12:0,36,806	0/0:23,0:23:63.20:0,63,1282	0/0:26,0:25:51.14:0,51,1353	0/0:19,0:19:45.15:0,45,999	0/0:22,0:22:63.22:0,63,1432	0/0:40,0:40:99:0,120,2681	0/0:28,0:28:75.24:0,75,1585	0/0:28,0:28:84.29:0,84,1913	0/0:30,0:30:87.30:0,87,1927	0/0:8,0:8:21.06:0,21,441	0/0:36,0:36:99:0,108,2430	0/0:30,0:30:90.27:0,90,1987	0/0:35,0:35:99:0,99,2190	0/0:26,0:26:75.26:0,75,1668	0/0:25,0:25:75.26:0,75,1616	1/1:2,53:55:99:2507,148,0	0/0:39,0:39:99:0,108,2485	0/0:27,0:27:78.27:0,78,1758	0/0:13,0:13:39.13:0,39,842	0/0:76,0:76:99:0,223,4841	0/0:20,0:20:48.16:0,48,1089	0/0:23,0:23:69.18:0,69,1483	0/0:36,0:36:99:0,102,2314	0/0:22,0:22:66.15:0,66,1350	0/0:35,0:35:96.33:0,96,2198	0/0:19,0:19:57.18:0,57,1238	0/0:14,0:14:36.12:0,36,816
chr10	3611121	.	T	TAGTCAC	17376.36	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-10.704;DP=788;FS=7.312;HRun=0;HaplotypeScore=151.4795;InbreedingCoeff=0.9879;MQ=78.28;MQ0=0;MQRankSum=-17.207;QD=73.94;ReadPosRankSum=-1.746;VQSLOD=4.7812;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,20:33:51.18:1830,51,0	0/0:9,0:9:27.09:0,27,649	0/0:19,0:19:51.16:0,51,1101	0/0:21,0:22:44.83:0,45,967	0/0:13,0:13:39.09:0,39,794	0/0:37,0:37:99:0,111,2550	0/0:36,0:36:99:0,105,2298	1/1:6,18:40:99:3093,111,0	0/0:31,0:31:93.32:0,93,2234	0/0:41,0:41:99:0,114,2635	0/0:16,0:16:45.15:0,45,1079	0/0:39,0:39:99:0,105,2502	0/0:33,0:33:93.25:0,93,2042	0/0:32,0:32:96.30:0,96,2188	1/1:6,34:40:99:3767,105,0	0/0:53,0:53:99:0,157,3610	1/1:2,9:14:15.05:538,15,0	1/1:0,8:12:24.08:863,24,0	0/0:25,0:25:66.21:0,66,1479	0/0:22,0:22:57.16:0,57,1208	0/0:52,0:52:99:0,138,3180	0/0:26,0:26:72.22:0,72,1599	0/0:19,0:19:42.11:0,42,913	0/0:28,0:27:78.25:0,78,1824	1/1:3,14:25:42.14:1507,42,0	1/1:6,15:28:66.21:2113,66,0	1/1:6,29:38:96.24:3356,96,0	1/1:0,2:3:9.03:310,9,0
chr10	3613086	.	A	AGAAAAG	3143.84	PASS	AB=0.855;AC=12;AF=0.214;AN=56;BaseQRankSum=2.663;DP=519;FS=2.168;HRun=0;HaplotypeScore=110.6712;InbreedingCoeff=0.1583;MQ=48.87;MQ0=31;MQRankSum=-0.165;QD=12.33;ReadPosRankSum=2.897;VQSLOD=2.5428;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:19:73.96:74,0,269	0/0:3,0:3:6:0,6,85	0/1:31,0:9:0.57:1,0,97	0/1:34,0:9:2.09:2,0,54	0/0:20,0:20:57.15:0,57,851	0/0:17,0:16:48.05:0,48,651	0/0:13,0:13:38.99:0,39,544	1/1:5,18:27:63.22:1029,63,0	0/0:12,0:10:23.31:0,23,265	0/0:9,0:9:24.08:0,24,415	0/0:16,0:16:41.98:0,42,612	0/0:22,0:20:33.05:0,33,467	0/0:12,0:12:36.08:0,36,515	0/0:7,0:7:14.97:0,15,225	0/1:9,0:16:18.02:18,0,56	0/0:16,0:15:44.97:0,45,545	0/1:25,0:21:59.99:117,0,60	0/0:15,0:19:0.07:0,0,107	0/0:18,0:17:47.89:0,48,515	0/0:24,0:22:60.05:0,60,848	0/0:10,0:8:14.88:0,15,239	0/0:11,0:11:29.98:0,30,403	0/0:14,0:14:36.03:0,36,530	0/0:15,0:12:30.47:0,30,420	0/1:34,0:35:32.25:32,0,208	0/1:6,16:28:84.05:1040,0,84	1/1:2,16:20:26.99:809,27,0	0/1:5,5:9:19.25:175,0,19
chr10	3613087	.	A	AG	148.72	PASS	AB=0.954;AC=8;AF=0.143;AN=56;BaseQRankSum=8.770;DP=512;FS=2.757;HRun=0;HaplotypeScore=78.5476;InbreedingCoeff=0.0242;MQ=50.38;MQ0=28;MQRankSum=0.279;QD=0.95;ReadPosRankSum=4.147;VQSLOD=1.3796;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:19:34.80:0,35,275	0/0:3,0:3:8.97:0,9,72	0/0:32,0:10:8.30:0,8,129	0/0:34,0:9:4.62:0,5,41	0/0:20,0:20:55.77:0,56,436	0/0:17,0:16:47.66:0,48,352	0/0:13,0:13:35.60:0,36,281	0/1:26,0:26:49.13:75,0,49	0/0:12,0:10:21.85:0,22,150	0/0:9,0:9:23.90:0,24,208	0/0:16,0:16:41.64:0,42,329	0/0:21,0:19:32.01:0,32,237	0/0:12,0:12:34.79:0,35,261	0/0:7,0:7:14.92:0,15,118	0/1:15,2:16:25.61:30,0,26	0/0:16,0:15:44.63:0,45,327	0/0:25,0:21:12.85:0,13,90	0/1:20,3:18:27.73:42,0,28	0/0:18,0:17:46.78:0,47,352	0/0:24,0:22:59.70:0,60,493	0/0:11,0:8:19.22:0,19,139	0/0:11,0:11:26.86:0,27,221	0/0:14,0:14:35.33:0,35,272	0/0:15,0:12:29.77:0,30,229	0/1:33,2:35:46.39:57,0,46	0/1:25,0:25:56.67:57,0,71	1/1:21,0:21:2.45:10,2,0	0/1:9,0:9:2.08:2,0,15
chr10	3613088	.	A	AG	171.69	PASS	AB=0.905;AC=6;AF=0.107;AN=56;BaseQRankSum=7.247;DP=513;FS=21.322;HRun=0;HaplotypeScore=78.1875;InbreedingCoeff=0.0331;MQ=50.67;MQ0=27;MQRankSum=-3.240;QD=1.29;ReadPosRankSum=5.240;VQSLOD=-0.1816;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:19:35.66:0,36,268	0/0:3,0:3:9:0,9,78	0/0:32,0:10:24.18:0,24,161	0/0:34,0:9:9.42:0,9,60	0/0:20,0:20:55.71:0,56,430	0/0:16,0:15:44.68:0,45,328	0/0:11,0:11:32.66:0,33,259	0/0:26,0:26:5.02:0,5,107	0/0:12,0:10:22.40:0,22,153	0/0:9,0:9:23.93:0,24,210	0/0:16,0:16:41.59:0,42,324	0/0:21,0:19:32.06:0,32,238	0/0:12,0:12:34.54:0,35,257	0/0:9,0:9:14.92:0,15,119	0/1:14,3:16:16.27:38,0,16	0/0:16,0:15:44.63:0,45,324	0/0:26,0:22:20.38:0,20,122	0/1:18,5:18:35.05:35,0,59	0/0:18,0:17:47.67:0,48,377	0/0:23,0:22:59.68:0,60,489	0/0:11,0:8:20.36:0,20,153	0/0:11,0:11:29.78:0,30,238	0/0:14,0:14:35.33:0,35,269	0/0:15,0:12:29.75:0,30,227	0/1:24,11:35:16.75:189,0,17	0/1:27,0:27:14.84:15,0,81	0/1:22,0:21:0.26:4,0,0	0/1:9,0:9:4.27:4,0,15
chr10	3613093	.	A	AAG	2354.93	PASS	AB=0.955;AC=15;AF=0.268;AN=56;BaseQRankSum=6.250;DP=515;FS=0.000;HRun=0;HaplotypeScore=78.2383;InbreedingCoeff=0.5696;MQ=55.31;MQ0=21;MQRankSum=1.087;QD=9.81;ReadPosRankSum=5.374;VQSLOD=2.8139;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:19,0:17:88.19:95,0,88	0/0:4,0:4:11.99:0,12,101	0/0:35,0:13:22.15:0,22,167	0/1:34,0:9:13.78:14,0,16	0/0:21,0:21:56.57:0,57,417	0/0:16,0:15:42.47:0,42,298	0/0:11,0:11:29.72:0,30,238	1/1:23,0:23:18.53:319,19,0	0/0:12,0:10:22.65:0,23,155	0/0:10,0:10:25.89:0,26,201	0/0:15,0:15:34.78:0,35,281	0/0:21,0:19:32.86:0,33,266	0/0:13,0:13:38.57:0,39,282	0/0:9,0:9:20.15:0,20,161	1/1:12,3:18:29.87:295,30,0	0/0:17,0:17:43.70:0,44,318	0/1:25,0:23:28.09:152,0,28	1/1:13,5:17:11.39:257,11,0	0/0:19,0:18:47.82:0,48,392	0/0:24,0:23:57.44:0,57,445	0/0:9,0:8:19.91:0,20,151	0/0:10,0:10:26.84:0,27,213	0/0:14,0:14:36.37:0,36,266	0/0:15,0:13:23.90:0,24,206	1/1:4,26:35:49.42:570,49,0	0/1:27,0:28:15.52:484,0,16	1/1:21,0:21:29.87:293,30,0	0/1:9,0:9:3.67:60,0,4
chr10	3613674	.	A	AAG	12030.57	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=18.466;DP=795;FS=0.000;HRun=0;HaplotypeScore=105.9055;InbreedingCoeff=0.9972;MQ=87.32;MQ0=1;MQRankSum=-6.117;QD=52.77;ReadPosRankSum=1.730;VQSLOD=5.3093;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,36:35:96.33:1835,96,0	0/0:15,0:15:42.14:0,42,679	0/0:30,0:30:87.23:0,87,1328	0/0:26,0:26:72.20:0,72,1112	0/0:19,0:19:57.19:0,57,927	0/0:25,0:25:75.24:0,75,1195	0/0:53,0:53:99:0,156,2479	1/1:0,25:27:81.25:1476,81,0	0/0:34,0:34:99:0,102,1655	0/0:17,0:17:51.17:0,51,831	0/0:16,0:16:48.16:0,48,783	0/0:27,0:27:81.28:0,81,1296	0/0:38,0:38:99:0,105,1704	0/0:27,0:27:78.27:0,78,1273	1/1:0,25:27:75.26:1450,75,0	0/0:40,0:40:99:0,120,1901	1/1:0,39:40:99:2060,108,0	1/1:0,32:32:87.30:1675,87,0	0/0:26,0:26:75.25:0,75,1191	0/0:21,0:21:57.19:0,57,924	0/0:87,0:87:99:0,259,4143	0/0:22,0:22:63.21:0,63,1022	0/0:12,0:12:36.12:0,36,583	0/0:32,0:32:96.28:0,96,1537	1/1:0,21:20:60.21:1158,60,0	1/1:1,21:22:17.27:1165,17,0	1/1:0,15:16:45.15:869,45,0	1/1:0,6:6:18.06:344,18,0
chr10	3613988	.	GAGTC	G	7153.69	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=14.149;DP=603;FS=0.000;HRun=0;HaplotypeScore=100.3769;InbreedingCoeff=0.9949;MQ=82.61;MQ0=0;MQRankSum=-4.929;QD=41.83;ReadPosRankSum=2.587;VQSLOD=5.1059;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,27:30:48.16:894,48,0	0/0:14,0:14:42.13:0,42,1065	0/0:21,0:21:63.22:0,63,1604	0/0:14,0:14:30.07:0,30,693	0/0:22,0:22:66.23:0,66,1753	0/0:19,0:19:48.16:0,48,1274	0/0:31,0:31:84.29:0,84,2240	1/1:3,14:17:42.14:776,42,0	0/0:34,0:34:99:0,99,2630	0/0:24,0:24:66.22:0,66,1710	0/0:20,0:20:60.21:0,60,1527	0/0:36,0:36:96.32:0,96,2440	0/0:17,0:17:48.16:0,48,1249	0/0:29,0:29:81.28:0,81,2153	1/1:1,23:24:60.21:1120,60,0	0/0:26,0:26:78.27:0,78,2074	1/1:2,26:28:60.54:1121,61,0	1/1:3,20:23:54.19:1008,54,0	0/0:18,0:18:45.15:0,45,1187	0/0:20,0:20:60.19:0,60,1510	0/0:26,0:26:72.23:0,72,1854	0/0:13,0:13:30.10:0,30,800	0/0:12,0:12:33.11:0,33,849	0/0:36,0:36:99:0,108,2811	1/1:3,14:17:39.12:724,39,0	1/1:2,12:14:36.12:672,36,0	1/1:2,12:14:33.11:616,33,0	1/1:0,4:4:12.04:224,12,0
chr10	3615062	.	ACCCCAG	A	987.82	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.833;DP=673;FS=0.880;HRun=0;HaplotypeScore=151.7839;InbreedingCoeff=0.9611;MQ=68.55;MQ0=0;MQRankSum=-5.597;QD=31.87;ReadPosRankSum=-1.491;VQSLOD=3.2600;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,29:31:47.58:1083,48,0	0/0:7,0:7:18.06:0,18,601	0/0:14,0:14:25.85:0,26,896	0/0:17,0:17:45.15:0,45,1240	0/0:22,0:22:66.23:0,66,2249	0/0:17,0:17:51.16:0,51,1781	0/0:30,0:30:87.30:0,87,3100	0/0:32,0:32:87.28:0,87,2872	0/0:25,0:25:72.25:0,72,2384	0/0:26,0:26:75.26:0,75,2610	0/0:11,0:11:33.09:0,33,1085	0/0:32,0:32:96.33:0,96,3446	0/0:31,0:31:93.32:0,93,3272	0/0:40,0:40:99:0,120,4044	0/0:35,0:35:99:0,102,3671	0/0:29,0:29:84.29:0,84,3019	0/0:30,0:30:90.31:0,90,3191	0/0:22,0:22:66.23:0,66,2225	0/0:18,0:18:54.19:0,54,1925	0/0:11,0:11:33.11:0,33,1204	0/0:39,0:39:99:0,111,3739	0/0:26,0:26:75.26:0,75,2741	0/0:19,0:19:51.18:0,51,1677	0/0:25,0:25:75.25:0,75,2575	0/0:27,0:27:78.26:0,78,2689	0/0:31,0:31:84.28:0,84,2971	0/0:22,0:22:66.21:0,66,2298	0/0:4,0:4:12.04:0,12,440
chr10	3616896	.	C	CA	8514.15	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-7.836;DP=689;FS=4.024;HRun=2;HaplotypeScore=66.0544;InbreedingCoeff=0.9996;MQ=85.25;MQ0=0;MQRankSum=-5.759;QD=36.23;ReadPosRankSum=1.107;VQSLOD=5.5289;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,29:30:78.26:1121,78,0	0/0:18,0:18:54.15:0,54,652	0/0:22,0:22:66.12:0,66,736	0/0:20,0:21:41.67:0,42,405	0/0:24,0:24:69.19:0,69,829	0/0:27,0:27:81.24:0,81,990	0/0:22,0:22:60.14:0,60,693	1/1:2,19:21:54.08:680,54,0	0/0:32,0:32:93.25:0,93,1116	0/0:22,0:22:60.17:0,60,722	0/0:29,0:29:81.22:0,81,971	0/0:28,0:28:60.29:0,60,953	0/0:24,0:24:72.20:0,72,865	0/0:29,0:29:87.23:0,87,1031	1/1:1,33:34:93.31:1338,93,0	0/0:26,0:26:78.24:0,78,956	1/1:1,32:33:75.25:1079,75,0	1/1:1,18:19:48.08:664,48,0	0/0:24,0:24:69.18:0,69,810	0/0:31,0:31:93.28:0,93,1137	0/0:21,0:21:60.18:0,60,730	0/0:19,0:19:54.15:0,54,649	0/0:23,0:23:63.15:0,63,740	0/0:12,0:12:33.10:0,33,408	1/1:1,33:34:81.27:1165,81,0	1/1:2,29:31:53.03:1134,53,0	1/1:0,24:24:69.23:988,69,0	1/1:0,9:9:24.08:345,24,0
chr10	3618551	.	A	ATAT	1101.24	PASS	AB=0.667;AC=13;AF=0.325;AN=40;BaseQRankSum=-4.151;DP=247;FS=2.263;HRun=0;HaplotypeScore=36.7039;InbreedingCoeff=0.5309;MQ=68.17;MQ0=5;MQRankSum=-0.395;QD=12.37;ReadPosRankSum=0.015;VQSLOD=2.7498;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:11,3:16:12.04:208,12,0	./.	./.	./.	0/0:4,0:6:5.95:0,6,42	0/0:8,0:7:12.04:0,12,157	./.	0/0:33,0:32:12.01:0,12,127	0/0:6,0:6:3.01:0,3,39	0/0:9,0:9:3.01:0,3,36	./.	./.	0/0:3,0:3:3.01:0,3,39	0/0:3,0:3:9.03:0,9,118	1/1:5,2:7:3.01:57,3,0	0/0:9,0:9:9.01:0,9,102	0/0:6,0:15:23.81:0,24,168	0/1:14,12:28:1.24:569,0,1	0/0:12,0:12:15.01:0,15,172	0/0:5,0:7:5.95:0,6,42	./.	0/0:5,0:5:3.01:0,3,36	0/0:2,0:2:3.01:0,3,39	./.	1/1:11,3:14:6.02:115,6,0	1/1:2,2:4:6.02:115,6,0	1/1:2,3:5:6.02:115,6,0	1/1:15,0:15:3.01:57,3,0
chr10	3622011	.	CTG	C	3988.99	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=11.502;DP=682;FS=2.991;HRun=0;HaplotypeScore=79.7899;InbreedingCoeff=0.9994;MQ=82.21;MQ0=1;MQRankSum=-0.329;QD=38.36;ReadPosRankSum=-0.564;VQSLOD=5.4777;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,126,2350	0/0:12,0:12:30.10:0,30,553	0/0:14,0:14:36.12:0,36,616	0/0:25,0:25:67.90:0,68,1270	0/0:17,0:17:51.15:0,51,918	0/0:24,0:24:66.23:0,66,1234	0/0:24,0:24:72.25:0,72,1348	1/1:2,27:29:78.25:1123,78,0	0/0:18,0:18:54.17:0,54,971	0/0:26,0:26:71.90:0,72,1281	0/0:15,0:15:45.15:0,45,841	0/0:37,0:37:99:0,111,2044	0/0:25,0:25:69.14:0,69,1128	0/0:29,0:29:84.29:0,84,1560	0/0:37,0:37:99:0,108,1978	0/0:22,0:22:66.23:0,66,1235	0/0:26,0:26:78.25:0,78,1426	0/0:21,0:21:63.17:0,63,1092	0/0:20,0:20:57.19:0,57,1035	0/0:13,0:13:33.11:0,33,617	0/0:47,0:47:99:0,141,2515	0/0:22,0:22:66.23:0,66,1233	0/0:12,0:12:36.12:0,36,673	0/0:30,0:30:90.26:0,90,1599	0/0:19,0:19:57.15:0,57,959	1/1:3,33:36:96.27:1365,96,0	1/1:1,28:29:75.25:1104,75,0	1/1:1,9:9:27.09:397,27,0
chr10	3622161	.	C	CA	9641.90	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=17.791;DP=790;FS=1.983;HRun=1;HaplotypeScore=100.4581;InbreedingCoeff=1.0000;MQ=84.33;MQ0=0;MQRankSum=-4.349;QD=36.94;ReadPosRankSum=1.670;VQSLOD=5.0886;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,40:41:93.27:1270,93,0	0/0:14,0:14:42.12:0,42,531	0/0:23,0:23:66.20:0,66,827	0/0:37,0:37:99:0,102,1294	0/0:25,0:25:75.24:0,75,974	0/0:23,0:23:60.19:0,60,778	0/0:24,0:24:72.17:0,72,901	1/1:0,33:33:99:1308,99,0	0/0:27,0:28:71.57:0,72,987	0/0:35,0:35:99:0,99,1262	0/0:16,0:16:45.15:0,45,583	0/0:32,0:31:90.27:0,90,1168	0/0:28,0:28:72.23:0,72,933	0/0:28,0:28:84.27:0,84,1089	1/1:0,36:36:99:1360,99,0	0/0:29,0:29:84.27:0,84,1088	1/1:0,25:25:72.24:1007,72,0	1/1:2,19:21:54.15:733,54,0	0/0:24,0:24:66.21:0,66,844	0/0:34,0:34:99:0,99,1271	0/0:55,0:55:99:0,153,1953	0/0:23,0:23:69.22:0,69,895	0/0:24,0:24:66.21:0,66,856	0/0:27,0:27:81.26:0,81,1052	1/1:0,21:21:57.19:796,57,0	1/1:2,33:35:63.38:1342,63,0	1/1:2,31:33:90.29:1241,90,0	1/1:0,16:16:42.14:585,42,0
chr10	3622330	.	GT	G	842.15	PASS	AB=1.000;AC=8;AF=0.143;AN=56;BaseQRankSum=5.356;DP=632;FS=10.646;HRun=1;HaplotypeScore=84.5263;InbreedingCoeff=0.6839;MQ=40.28;MQ0=126;MQRankSum=-4.856;QD=10.40;ReadPosRankSum=-0.085;VQSLOD=0.4082;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:27:23.58:0,24,292	0/0:11,0:9:18.06:0,18,238	0/0:18,0:7:21.07:0,21,267	0/0:23,0:7:21.07:0,21,265	0/0:12,0:10:24.08:0,24,314	0/0:21,0:14:18.06:0,18,248	0/0:33,0:23:34.16:0,34,417	1/1:8,10:13:19.96:342,20,0	0/0:18,0:16:30.94:0,31,339	0/0:20,0:15:43.53:0,44,519	0/0:17,0:13:25.89:0,26,309	0/0:27,0:21:33.83:0,34,426	0/0:21,0:16:42.13:0,42,536	0/0:28,0:23:48.15:0,48,609	0/0:28,0:25:33.58:0,34,419	0/0:30,0:22:51.37:0,51,645	0/0:27,0:24:41.08:0,41,510	0/1:27,0:21:29.41:29,0,470	0/0:19,0:13:36.09:0,36,447	0/0:17,0:12:21.53:0,22,254	0/0:54,0:36:42.61:0,43,544	0/0:18,0:13:27.09:0,27,360	0/0:14,0:9:8.40:0,8,113	0/0:32,0:29:53.33:0,53,681	0/0:22,0:16:23.80:0,24,309	1/1:9,5:11:26.99:337,27,0	1/1:5,9:13:22.64:265,23,0	0/1:7,0:6:21.01:21,0,29
chr10	3622348	.	GT	G	338.14	PASS	AB=0.855;AC=4;AF=0.077;AN=52;BaseQRankSum=4.489;DP=556;FS=0.877;HRun=1;HaplotypeScore=92.6477;InbreedingCoeff=-0.0302;MQ=38.73;MQ0=123;MQRankSum=-5.665;QD=6.15;ReadPosRankSum=-0.915;VQSLOD=0.0590;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,4:18:10.56:0,11,102	0/1:11,0:9:6.61:7,0,182	./.	./.	0/0:13,0:11:24.06:0,24,299	0/0:20,0:14:21.07:0,21,286	0/0:32,0:22:35.94:0,36,461	0/1:11,2:7:31.45:85,0,31	0/0:19,0:17:25.24:0,25,274	0/0:19,0:14:40.65:0,41,480	0/0:14,0:11:19.87:0,20,228	0/0:28,0:22:36.84:0,37,463	0/0:19,0:14:36.08:0,36,436	0/0:22,0:17:30.57:0,31,378	0/0:30,0:21:18.53:0,19,225	0/0:30,0:22:55.09:0,55,697	0/0:23,0:19:20.23:0,20,311	0/0:25,1:17:3.22:0,3,448	0/0:14,0:9:24.94:0,25,298	0/0:14,0:9:15.05:0,15,189	0/0:47,0:29:15.52:0,16,201	0/0:22,0:16:36.12:0,36,471	0/0:10,0:5:5.65:0,6,75	0/0:32,0:29:44.98:0,45,601	0/0:23,0:15:14.33:0,14,164	0/1:11,4:13:61.29:167,0,61	0/1:11,5:15:7.42:183,0,7	0/0:10,0:9:13.83:0,14,108
chr10	3622352	.	GT	G	528.71	PASS	AB=0.708;AC=6;AF=0.115;AN=52;BaseQRankSum=7.482;DP=560;FS=11.196;HRun=1;HaplotypeScore=89.9114;InbreedingCoeff=0.5731;MQ=37.99;MQ0=129;MQRankSum=-7.689;QD=10.37;ReadPosRankSum=-2.101;VQSLOD=-0.0221;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:16:3.83:0,4,90	0/0:11,0:9:18.06:0,18,233	./.	./.	0/0:12,0:10:18.06:0,18,237	0/0:18,0:12:18.06:0,18,247	0/0:30,0:20:32.89:0,33,410	1/1:9,1:5:5.25:23,5,0	0/0:18,0:16:22.25:0,22,248	0/0:21,0:16:43.65:0,44,508	0/0:15,0:12:19.87:0,20,231	0/0:29,0:23:39.85:0,40,501	0/0:18,0:13:30.10:0,30,389	0/0:20,0:15:27.56:0,28,340	0/0:27,0:18:9.50:0,9,112	0/0:28,0:20:52.75:0,53,662	0/0:26,0:20:25.02:0,25,257	0/0:27,0:17:26.40:0,26,384	0/0:15,0:9:27.04:0,27,317	0/0:12,0:7:12.04:0,12,150	0/0:47,0:29:18.51:0,19,224	0/0:22,0:16:36.09:0,36,447	0/0:10,0:5:5.65:0,6,75	0/0:36,0:33:56.95:0,57,717	0/0:21,0:13:8.06:0,8,72	0/1:10,5:13:0.20:234,0,0	1/1:10,6:15:23.30:256,23,0	0/1:5,5:9:23.44:141,0,23
chr10	3622369	.	TG	T	1100.93	PASS	AB=0.906;AC=13;AF=0.232;AN=56;BaseQRankSum=8.743;DP=580;FS=1.961;HRun=2;HaplotypeScore=87.4930;InbreedingCoeff=0.5872;MQ=41.19;MQ0=128;MQRankSum=-7.755;QD=6.51;ReadPosRankSum=0.555;VQSLOD=0.8052;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:21,9:11:9:98,9,0	0/0:9,0:7:15.04:0,15,187	0/0:31,1:8:17.97:0,18,181	0/0:30,0:6:5.97:0,6,79	0/0:13,0:11:24.08:0,24,323	0/0:17,0:11:15.03:0,15,176	0/0:31,0:22:37.48:0,37,490	0/0:13,0:8:14.73:0,15,100	0/0:15,0:12:11.29:0,11,99	0/0:25,0:22:58.53:0,59,696	0/0:13,0:11:23.44:0,23,287	0/0:27,0:23:42.75:0,43,549	0/0:13,0:10:27.09:0,27,363	0/0:16,0:11:21.06:0,21,267	1/1:15,10:13:2.60:37,3,0	0/0:26,0:20:52.58:0,53,678	0/1:24,5:22:12.26:181,0,12	1/1:20,2:14:34.04:331,34,0	0/0:24,0:17:50.68:0,51,602	0/0:10,0:6:6.02:0,6,80	0/0:33,0:21:21.07:0,21,284	0/0:21,0:16:14.38:0,14,433	0/0:10,0:7:9.03:0,9,120	0/0:29,3:30:13.59:0,14,617	1/1:13,6:10:6.02:76,6,0	0/1:17,1:16:6.27:208,0,6	1/1:15,0:15:25.53:203,26,0	0/1:10,1:9:18.78:134,0,19
chr10	3622370	.	G	GT	1037.85	PASS	AB=0.981;AC=13;AF=0.232;AN=56;BaseQRankSum=8.320;DP=566;FS=0.604;HRun=1;HaplotypeScore=83.9652;InbreedingCoeff=0.5921;MQ=42.98;MQ0=122;MQRankSum=-8.261;QD=6.57;ReadPosRankSum=1.197;VQSLOD=0.6311;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:22,4:9:8.94:93,9,0	0/0:9,0:7:15.05:0,15,190	0/0:33,0:8:18.02:0,18,182	0/0:31,0:7:8.58:0,9,97	0/0:13,0:11:24.08:0,24,317	0/0:18,0:12:15.04:0,15,186	0/0:31,0:22:36.70:0,37,488	0/0:13,0:8:14.73:0,15,101	0/0:15,0:12:11.90:0,12,131	0/0:25,0:22:58.57:0,59,723	0/0:13,0:11:24.05:0,24,302	0/0:27,0:23:42.18:0,42,552	0/0:13,0:10:27.09:0,27,362	0/0:14,0:11:20.95:0,21,268	1/1:15,9:13:2.64:37,3,0	0/0:24,0:19:54.11:0,54,685	0/1:29,0:22:12.15:186,0,12	1/1:13,8:12:23.25:274,23,0	0/0:24,0:17:50.89:0,51,599	0/0:10,0:6:6.02:0,6,80	0/0:32,0:21:21.06:0,21,280	0/0:21,0:16:14.38:0,14,436	0/0:10,0:7:9.01:0,9,120	0/0:31,0:30:16.17:0,16,621	1/1:12,5:9:5.61:76,6,0	0/1:16,1:15:6.52:208,0,7	1/1:11,0:11:23.49:197,23,0	0/1:11,0:9:19.03:133,0,19
chr10	3622372	.	TGTGTG	T	1893.99	PASS	AB=0.732;AC=14;AF=0.250;AN=56;BaseQRankSum=8.067;DP=573;FS=5.413;HRun=0;HaplotypeScore=103.3542;InbreedingCoeff=0.5319;MQ=43.57;MQ0=120;MQRankSum=-6.472;QD=11.01;ReadPosRankSum=2.605;VQSLOD=1.8637;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:9:5.95:23,6,0	0/0:9,0:7:15.05:0,15,327	0/0:35,0:9:23.28:0,23,368	0/0:32,0:7:9.46:0,9,168	0/0:13,0:11:27.09:0,27,577	0/0:17,0:12:18.04:0,18,307	0/0:32,0:23:42.09:0,42,886	1/1:13,0:8:11.22:40,11,0	0/0:15,0:12:15.05:0,15,246	0/0:24,0:21:56.56:0,57,1133	0/0:14,0:12:24.04:0,24,517	0/0:28,0:24:36.45:0,36,923	0/0:12,0:10:27.09:0,27,617	0/0:17,0:14:30.57:0,31,599	1/1:24,0:13:2.15:27,2,0	0/0:25,0:20:57.12:0,57,1210	0/1:15,14:22:12.72:258,0,13	1/1:20,0:11:0.72:207,1,0	0/0:25,0:18:51.17:0,51,978	0/0:12,0:9:15.05:0,15,251	0/0:32,0:22:24.08:0,24,549	0/0:18,0:13:36.12:0,36,856	0/0:9,0:6:12.04:0,12,253	0/0:31,0:30:53.32:0,53,1264	0/1:18,0:9:0.18:23,0,0	0/1:4,13:15:29.17:694,0,29	1/1:2,11:13:22.55:492,23,0	0/1:6,5:9:19.86:295,0,20
chr10	3622374	.	TGTG	T	1059.92	PASS	AB=0.992;AC=10;AF=0.179;AN=56;BaseQRankSum=7.220;DP=581;FS=4.745;HRun=0;HaplotypeScore=98.0836;InbreedingCoeff=0.4918;MQ=44.00;MQ0=118;MQRankSum=-6.510;QD=8.48;ReadPosRankSum=1.449;VQSLOD=2.7283;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:11:0.91:0,1,83	0/0:9,0:7:15.05:0,15,309	0/0:35,0:9:23.57:0,24,386	0/0:38,0:10:17.55:0,18,245	0/0:12,0:11:27.09:0,27,525	0/0:16,0:11:18.04:0,18,311	0/0:32,0:23:40.95:0,41,819	1/1:5,7:8:15.05:249,15,0	0/0:15,0:12:15.04:0,15,248	0/0:25,0:22:57.02:0,57,1114	0/0:15,0:13:27.05:0,27,534	0/0:28,0:24:44.98:0,45,870	0/0:13,0:11:30.10:0,30,604	0/0:17,0:14:29.77:0,30,571	0/1:24,0:13:0.22:0,0,0	0/0:26,0:21:59.19:0,59,1105	0/1:28,1:22:14.74:182,0,15	1/1:19,0:10:8.98:165,9,0	0/0:24,0:18:50.91:0,51,917	0/0:13,0:10:18.06:0,18,325	0/0:34,0:24:31.62:0,32,582	0/0:18,0:13:36.12:0,36,802	0/0:9,0:6:12.04:0,12,249	0/0:30,0:29:56.63:0,57,1100	0/0:18,0:9:2.06:0,2,14	0/1:17,0:15:34.36:261,0,34	1/1:13,0:13:22.54:232,23,0	0/1:10,0:9:35.52:119,0,36
chr10	3622376	.	TG	T	432.96	PASS	AB=0.949;AC=10;AF=0.179;AN=56;BaseQRankSum=8.038;DP=593;FS=1.271;HRun=2;HaplotypeScore=93.7490;InbreedingCoeff=0.3526;MQ=44.70;MQ0=117;MQRankSum=-6.504;QD=2.89;ReadPosRankSum=0.622;VQSLOD=-0.1006;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:28,1:13:16.27:16,0,143	0/0:9,0:7:15.05:0,15,220	0/0:40,0:11:27.02:0,27,340	0/0:39,0:11:19.29:0,19,226	0/0:12,0:11:27.07:0,27,373	0/0:17,0:12:21.03:0,21,265	0/0:31,0:22:40.58:0,41,558	1/1:11,0:8:14.58:88,15,0	0/0:15,1:13:18.03:0,18,224	0/0:27,0:24:71.03:0,71,948	0/0:14,0:12:27.05:0,27,374	0/0:27,0:23:44.48:0,44,604	0/0:13,0:11:30.10:0,30,422	0/0:18,0:15:32.46:0,32,433	0/0:25,0:14:4.66:0,5,13	0/0:27,0:22:63.08:0,63,823	0/1:26,3:22:17.96:120,0,18	0/1:17,3:11:1.78:113,0,2	0/0:25,0:19:56.53:0,57,748	0/0:13,0:10:18.06:0,18,255	0/0:33,0:23:34.58:0,35,446	0/0:18,0:13:36.12:0,36,540	0/0:9,0:6:12.04:0,12,170	0/0:29,1:29:56.81:0,57,782	0/1:17,1:10:0.09:0,0,10	0/1:17,0:15:34.09:102,0,34	1/1:13,0:13:20.82:98,21,0	0/1:11,0:9:43.80:44,0,49
chr10	3622377	.	GGT	G	538.02	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=7.666;DP=584;FS=0.000;HRun=0;HaplotypeScore=93.9275;InbreedingCoeff=0.5525;MQ=45.20;MQ0=115;MQRankSum=-5.565;QD=2.66;ReadPosRankSum=1.401;VQSLOD=1.6527;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:12:22.35:0,22,221	0/0:8,0:6:12.04:0,12,192	0/0:41,0:12:26.46:0,26,376	0/0:40,0:11:18.47:0,18,225	0/0:12,0:11:24.08:0,24,383	0/0:17,0:12:15.05:0,15,238	0/0:31,1:23:6.30:0,6,563	1/1:10,0:7:13.39:55,13,0	0/1:15,0:12:0.89:1,0,171	0/0:27,0:25:31.39:0,31,708	0/0:14,0:12:24.08:0,24,380	0/0:26,0:22:5.93:0,6,565	0/0:13,0:11:26.66:0,27,370	0/1:18,0:15:0.83:1,0,420	1/1:12,11:12:9.03:107,9,0	0/0:27,0:22:46.05:0,46,746	1/1:26,0:20:1.78:26,2,0	1/1:13,6:11:17.94:228,18,0	0/0:25,0:19:13.01:0,13,613	0/0:12,1:10:18.06:0,18,267	0/1:31,0:23:2.96:3,0,398	0/0:19,0:14:39.13:0,39,615	0/0:8,0:6:15.05:0,15,215	0/0:29,0:29:21.66:0,22,789	1/1:12,5:8:9.37:87,9,0	0/1:16,0:15:57.50:68,0,58	1/1:12,0:12:21.93:95,22,0	0/1:11,0:9:28.11:41,0,28
chr10	3624293	.	TTC	T	953.65	PASS	AB=0.929;AC=14;AF=0.250;AN=56;BaseQRankSum=5.866;DP=794;FS=6.068;HRun=0;HaplotypeScore=119.6702;InbreedingCoeff=0.1069;MQ=64.90;MQ0=22;MQRankSum=-0.603;QD=3.96;ReadPosRankSum=2.933;VQSLOD=2.2293;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:28:27.81:112,0,28	0/1:7,0:7:46.37:46,0,77	0/0:67,0:27:3.43:0,3,20	0/0:105,0:30:13.19:0,13,116	0/0:21,0:21:7.81:0,8,541	0/0:14,2:16:18.05:0,18,254	0/1:20,4:24:57.83:58,0,506	0/0:20,1:33:30.44:0,30,289	0/0:19,1:20:7.78:0,8,501	0/1:20,3:23:60.85:61,0,443	0/1:15,0:15:7.13:7,0,309	0/0:30,1:30:16.82:0,17,695	0/0:20,0:20:27.07:0,27,413	0/0:26,1:27:1.83:0,2,467	0/0:29,0:29:5.37:0,5,108	0/0:29,1:30:19.86:0,20,747	1/1:14,4:18:22.86:234,23,0	0/0:21,0:20:37.99:0,38,400	0/0:24,1:25:1.26:0,1,430	0/0:20,0:20:33.04:0,33,454	0/0:35,3:37:10.81:0,11,583	0/0:30,0:30:54.18:0,54,825	0/1:15,1:16:10.23:10,0,294	0/1:43,7:50:87.32:87,0,974	0/0:19,0:19:22.19:0,22,190	1/1:12,11:22:36.07:398,36,0	0/1:22,0:22:33.97:65,0,34	1/1:15,0:13:3.01:34,3,0
chr10	3624316	.	TCTCTCTCG	T	1035.90	PASS	AB=0.927;AC=10;AF=0.179;AN=56;BaseQRankSum=5.774;DP=712;FS=4.746;HRun=0;HaplotypeScore=180.1786;InbreedingCoeff=0.1855;MQ=56.29;MQ0=18;MQRankSum=3.394;QD=6.77;ReadPosRankSum=-0.078;VQSLOD=2.5914;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:29:29.41:76,0,29	0/1:7,0:6:35.84:36,0,100	0/0:30,0:4:2.96:0,3,19	0/0:65,0:19:14.48:0,14,119	0/0:27,0:27:17.28:0,17,908	0/0:18,0:18:27:0,27,395	0/1:28,0:27:47.93:48,0,567	0/0:23,0:23:30.44:0,30,289	0/0:18,0:18:16.78:0,17,882	0/0:21,0:21:25.77:0,26,891	0/0:19,0:19:6.65:0,7,721	0/0:30,0:29:34.83:0,35,1332	0/0:14,0:14:9.38:0,9,546	0/0:22,0:22:11.31:0,11,1228	0/0:27,0:27:11.41:0,11,225	0/0:31,0:31:37.24:0,37,1314	0/1:16,0:16:23.16:203,0,23	0/0:24,0:23:53.08:0,53,643	0/0:34,0:34:18.61:0,19,905	0/0:21,0:21:38.93:0,39,491	0/0:38,0:36:24.81:0,25,968	0/0:27,0:27:55.23:0,55,1177	0/1:16,0:15:1.32:1,0,518	0/0:47,0:47:51.39:0,51,2441	0/0:23,0:23:49.49:0,49,501	1/1:24,0:23:56.91:609,57,0	0/1:5,18:23:31.14:133,0,31	1/1:3,7:7:3.01:73,3,0
chr10	3624318	.	T	TCG	470.96	PASS	AB=0.948;AC=6;AF=0.107;AN=56;BaseQRankSum=0.381;DP=693;FS=0.756;HRun=0;HaplotypeScore=124.6356;InbreedingCoeff=0.0799;MQ=55.71;MQ0=14;MQRankSum=-0.137;QD=4.76;ReadPosRankSum=-2.010;VQSLOD=2.7691;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:23,7:30:2.74:413,3,0	0/1:6,1:6:83.95:84,0,116	0/0:27,0:4:2.96:0,3,19	0/0:52,0:16:0.58:0,1,152	0/0:28,0:28:54.16:0,54,671	0/0:18,0:18:30.03:0,30,351	0/0:28,0:27:58.45:0,58,691	0/0:23,0:23:34.61:0,35,217	0/0:17,0:17:50.81:0,51,614	0/0:21,0:21:62.86:0,63,750	0/0:19,0:19:45.21:0,45,479	0/0:28,0:27:68.87:0,69,869	0/0:15,0:15:34.92:0,35,482	0/0:22,0:22:47.55:0,48,609	0/0:26,0:26:4.14:0,4,118	0/0:30,0:30:80.64:0,81,1001	0/1:16,0:16:37.97:38,0,78	0/0:24,0:23:46.02:0,46,332	0/0:35,0:34:20.34:0,20,628	0/0:15,0:21:41.96:0,42,516	0/0:37,0:35:68.77:0,69,797	0/0:25,0:25:69.16:0,69,944	0/0:16,0:15:32.81:0,33,405	0/0:47,0:47:99:0,132,1523	0/0:23,0:23:32.66:0,33,281	0/1:22,1:22:11.52:12,0,275	0/1:22,1:23:41.19:41,0,78	0/0:10,0:7:2.74:0,3,12
chr10	3624324	.	GCT	G	49.10	PASS	AB=0.961;AC=5;AF=0.093;AN=54;BaseQRankSum=5.939;DP=655;FS=3.958;HRun=0;HaplotypeScore=118.3904;InbreedingCoeff=0.2970;MQ=53.86;MQ0=14;MQRankSum=-1.244;QD=0.61;ReadPosRankSum=1.265;VQSLOD=2.3325;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:10.89:0,11,171	0/0:7,0:6:16.13:0,16,190	./.	0/0:36,1:9:4.64:0,5,23	0/0:28,0:28:53.85:0,54,857	0/0:17,0:17:33.10:0,33,508	0/0:30,0:29:65.42:0,65,877	0/0:26,0:23:44.80:0,45,421	0/0:16,0:16:47.74:0,48,733	0/0:21,0:21:59.82:0,60,875	0/0:17,0:17:39.16:0,39,534	0/0:32,0:31:84.17:0,84,1314	0/0:15,0:15:33.57:0,34,533	0/0:25,0:25:51.63:0,52,852	0/1:22,2:24:29.11:29,0,44	0/0:28,0:28:77.40:0,77,1216	0/0:16,0:16:17.54:0,18,100	0/1:23,1:23:4.73:106,0,5	0/0:32,0:31:83.04:0,83,999	0/0:18,0:18:24.02:0,24,336	0/0:36,0:34:69.11:0,69,1048	0/0:24,0:24:65.89:0,66,1065	0/0:14,0:13:28.65:0,29,456	0/0:43,0:43:99:0,113,1743	0/0:26,1:27:19.59:0,20,62	0/0:21,0:20:27.38:0,27,158	0/1:22,0:22:1.21:1,0,67	1/1:10,0:7:2.50:9,2,0
chr10	3624328	.	TCG	T	323.70	PASS	AB=0.924;AC=6;AF=0.111;AN=54;BaseQRankSum=9.701;DP=637;FS=1.352;HRun=0;HaplotypeScore=112.0957;InbreedingCoeff=0.0905;MQ=53.67;MQ0=14;MQRankSum=-2.839;QD=2.74;ReadPosRankSum=0.648;VQSLOD=2.0220;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:18,14:32:69.18:69,0,245	0/0:7,0:6:18.02:0,18,267	./.	0/0:25,0:4:1.67:0,2,9	0/0:31,0:30:59.97:0,60,945	0/0:18,0:18:33.03:0,33,544	0/0:29,0:28:63.05:0,63,991	0/0:26,0:23:46.95:0,47,599	0/0:16,0:16:48.06:0,48,782	0/0:20,0:20:57.05:0,57,874	0/0:15,0:15:20.60:0,21,551	0/0:32,0:31:81.19:0,81,1367	0/0:15,0:15:36.57:0,37,593	0/0:28,0:26:60.13:0,60,1027	0/1:23,0:23:10.92:73,0,11	0/0:29,0:29:75.02:0,75,1366	0/0:14,0:14:7.12:0,7,108	0/1:25,0:24:99:135,0,113	0/0:30,0:28:74.08:0,74,1127	0/0:16,0:16:26.41:0,26,304	0/0:35,0:33:66.09:0,66,1135	0/0:23,0:23:69.12:0,69,1115	0/0:14,0:13:33.08:0,33,527	0/0:43,0:43:99:0,117,1989	0/1:29,0:29:21.04:153,0,21	0/0:20,0:19:52.11:0,52,512	0/0:22,0:22:3.91:0,4,128	1/1:9,0:7:1.55:4,2,0
chr10	3624330	.	GCT	G	818.37	PASS	AB=0.917;AC=5;AF=0.093;AN=54;BaseQRankSum=8.286;DP=626;FS=0.000;HRun=0;HaplotypeScore=109.5255;InbreedingCoeff=0.5450;MQ=53.85;MQ0=15;MQRankSum=-0.711;QD=10.63;ReadPosRankSum=2.707;VQSLOD=3.4030;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:11.49:0,11,294	0/0:8,0:7:21.07:0,21,347	./.	0/0:20,0:3:5.35:0,5,30	0/0:31,0:30:59.86:0,60,971	0/0:17,0:17:30.09:0,30,510	0/0:30,0:29:63.22:0,63,1083	0/0:25,0:22:51.16:0,51,807	0/0:16,0:16:42.13:0,42,713	0/0:20,0:20:54:0,54,855	0/0:14,0:14:30.57:0,31,539	0/0:32,0:31:78.23:0,78,1296	0/0:15,0:14:36.56:0,37,562	0/0:28,0:26:63.20:0,63,1069	0/1:20,2:22:15.46:158,0,15	0/0:29,0:29:81.24:0,81,1331	0/0:13,0:13:10.44:0,10,233	1/1:13,13:25:0.48:322,0,0	0/0:28,0:25:72.11:0,72,1206	0/0:18,0:17:27.05:0,27,351	0/0:34,0:32:66.19:0,66,1081	0/0:24,0:24:68.97:0,69,1113	0/0:15,0:14:36.10:0,36,580	0/0:41,0:41:99:0,114,1965	1/1:9,20:29:28.89:453,29,0	0/0:20,0:19:57.11:0,57,752	0/0:22,0:22:13.28:0,13,179	0/0:9,0:7:2.74:0,3,12
chr10	3624332	.	T	TCTCG	1223.65	PASS	AC=6;AF=0.111;AN=54;BaseQRankSum=9.106;DP=630;FS=2.166;HRun=0;HaplotypeScore=131.9425;InbreedingCoeff=0.8055;MQ=53.86;MQ0=16;MQRankSum=0.121;QD=15.11;ReadPosRankSum=2.430;VQSLOD=3.2026;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:5.79:0,6,80	0/0:8,0:7:21.07:0,21,345	./.	0/0:20,0:3:2.98:0,3,22	0/0:31,0:30:54.18:0,54,900	0/0:16,0:16:27.08:0,27,448	0/0:29,0:28:62.88:0,63,968	0/0:26,0:23:39.05:0,39,611	0/0:17,0:17:39.12:0,39,652	0/0:19,0:19:47.95:0,48,746	0/0:14,0:14:30.10:0,30,532	0/0:30,0:29:72.23:0,72,1218	0/0:15,0:14:29.59:0,30,492	0/0:28,0:26:53.85:0,54,912	1/1:9,16:25:15.01:224,15,0	0/0:29,0:29:63:0,63,1150	0/0:15,0:15:4.63:0,5,166	1/1:24,2:25:51.03:718,51,0	0/0:30,0:26:71.77:0,72,1084	0/0:17,0:16:27.05:0,27,364	0/0:34,0:32:54.17:0,54,909	0/0:24,0:24:63.21:0,63,1057	0/0:16,0:15:35.11:0,35,516	0/0:43,0:42:99:0,111,1903	1/1:30,0:30:41.99:419,42,0	0/0:20,0:19:54.18:0,54,930	0/0:22,0:22:15.04:0,15,217	0/0:9,0:7:3.01:0,3,47
chr10	3625328	.	CT	C	4556.77	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=12.260;DP=759;FS=10.087;HRun=7;HaplotypeScore=80.0342;InbreedingCoeff=0.9982;MQ=82.17;MQ0=1;MQRankSum=-2.196;QD=23.37;ReadPosRankSum=0.730;VQSLOD=4.6934;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,102,1268	0/0:19,0:19:57.13:0,57,651	0/0:38,0:35:74.38:0,74,805	0/0:36,0:31:30.51:0,31,619	0/0:24,0:24:60.19:0,60,754	0/0:29,0:29:75.24:0,75,942	0/0:23,0:23:69.18:0,69,829	1/1:3,30:33:86.94:850,87,0	0/0:17,0:17:48.12:0,48,567	0/0:20,0:20:57.18:0,57,712	0/0:23,0:23:54.16:0,54,665	0/0:24,0:24:66.18:0,66,804	0/0:29,0:29:84.26:0,84,1043	0/0:22,0:22:63.18:0,63,768	1/1:4,27:31:66.15:673,66,0	0/0:26,0:26:78.23:0,78,948	0/0:21,0:21:63.15:0,63,761	1/1:2,20:22:51.11:520,51,0	0/0:29,0:29:81.17:0,81,942	0/0:18,0:18:51.14:0,51,616	0/0:44,0:44:99:0,120,1427	0/0:27,0:27:78.23:0,78,966	0/0:31,0:31:87.28:0,87,1089	0/0:29,0:29:81.20:0,81,956	1/1:3,31:34:63:641,63,0	1/1:2,29:31:17.73:805,18,0	1/1:0,32:32:75.03:762,75,0	1/1:0,12:12:30.07:306,30,0
chr10	3626066	.	CT	C	2520.23	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=10.196;DP=762;FS=2.869;HRun=1;HaplotypeScore=77.8557;InbreedingCoeff=0.9995;MQ=89.62;MQ0=0;MQRankSum=-3.472;QD=35.00;ReadPosRankSum=2.296;VQSLOD=3.9645;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,41:41:99:1509,108,0	0/0:9,0:9:27.09:0,27,428	0/0:32,0:32:81.05:0,81,1272	0/0:25,0:25:56.18:0,56,1024	0/0:20,0:20:60.20:0,60,958	0/0:16,0:16:48.14:0,48,719	0/0:28,0:28:84.29:0,84,1342	0/0:35,0:34:99:0,105,1673	0/0:21,0:21:63.21:0,63,1005	0/0:39,0:39:99:0,114,1822	0/0:19,0:19:54.17:0,54,838	0/0:26,0:26:78.27:0,78,1247	0/0:29,0:29:87.27:0,87,1344	0/0:25,0:25:75.23:0,75,1150	0/0:43,0:43:99:0,129,1983	0/0:28,0:28:84.25:0,84,1295	1/1:0,31:31:81.27:1133,81,0	0/0:20,0:20:57.19:0,57,911	0/0:22,0:22:63.21:0,63,996	0/0:33,0:33:99:0,99,1535	0/0:49,0:49:99:0,147,2318	0/0:18,0:18:54.18:0,54,862	0/0:21,0:21:63.21:0,63,1007	0/0:32,0:32:96.28:0,96,1464	0/0:19,0:19:57.19:0,57,910	0/0:29,0:29:84.28:0,84,1322	0/0:34,0:34:99:0,99,1570	0/0:18,0:18:54.18:0,54,863
chr10	3627790	.	C	CAT	8728.73	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-5.474;DP=613;FS=8.205;HRun=0;HaplotypeScore=75.3422;InbreedingCoeff=0.9601;MQ=67.83;MQ0=2;MQRankSum=0.618;QD=40.41;ReadPosRankSum=0.887;VQSLOD=6.6498;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:51.13:0,51,645	0/0:4,0:4:12.03:0,12,144	0/0:19,0:11:11.47:0,11,126	0/0:41,0:18:4.58:0,5,121	0/0:31,0:31:90.28:0,90,1179	0/0:19,0:19:57.16:0,57,727	0/0:8,0:8:24.06:0,24,302	1/1:7,38:47:99:1883,120,0	0/0:15,0:15:39.10:0,39,500	0/0:32,0:32:96.29:0,96,1230	0/0:30,0:30:78.22:0,78,1004	0/0:13,0:13:39.11:0,39,503	0/0:15,0:15:45.10:0,45,563	0/0:24,0:24:69.16:0,69,880	1/1:1,19:21:57.20:986,57,0	0/0:18,0:18:48.11:0,48,603	0/0:18,0:18:48.10:0,48,617	1/1:2,23:26:54.18:922,54,0	0/0:13,0:13:39.11:0,39,504	0/0:38,0:38:99:0,102,1300	0/0:10,0:10:30.10:0,30,398	0/0:5,0:5:15.05:0,15,193	0/0:17,0:17:45.15:0,45,598	0/0:7,0:7:21.07:0,21,279	1/1:1,27:28:69.24:1194,69,0	1/1:6,33:39:65.42:1720,65,0	1/1:1,29:30:69.24:1194,69,0	1/1:4,21:25:48.16:830,48,0
chr10	3627921	.	A	ATGAT	902.51	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-4.553;DP=569;FS=3.857;HRun=0;HaplotypeScore=87.7053;InbreedingCoeff=0.8818;MQ=64.35;MQ0=0;MQRankSum=-0.862;QD=45.13;ReadPosRankSum=1.396;VQSLOD=4.2050;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,14:20:42.14:997,42,0	0/0:5,0:5:15.05:0,15,250	0/0:9,0:9:21.07:0,21,334	0/0:5,0:5:9.03:0,9,133	0/0:36,0:36:75.24:0,75,1219	0/0:17,0:17:36.12:0,36,600	0/0:7,0:6:12.04:0,12,197	0/0:40,0:40:78.26:0,78,1265	0/0:21,0:21:54.18:0,54,875	0/0:17,0:17:45.14:0,45,701	0/0:23,0:23:51.16:0,51,825	0/0:19,0:19:45.15:0,45,744	0/0:24,0:24:60.20:0,60,993	0/0:17,0:17:36.11:0,36,574	0/0:21,0:21:57.17:0,57,896	0/0:18,0:18:45.15:0,45,743	0/0:24,0:24:60.21:0,60,999	0/0:24,0:24:66.18:0,66,1061	0/0:12,0:12:15.05:0,15,250	0/0:37,0:37:78.25:0,78,1267	0/0:8,0:8:21.07:0,21,350	0/0:12,0:12:30.10:0,30,499	0/0:15,0:15:36.11:0,36,575	0/0:9,0:9:21.07:0,21,350	0/0:32,0:32:81.26:0,81,1321	0/0:46,0:46:99:0,105,1711	0/0:32,0:31:78.27:0,78,1296	0/0:19,0:19:42.14:0,42,695
chr10	3628901	.	CGTGCGCGCGT	C	1226.86	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=7.056;DP=465;FS=0.713;HRun=0;HaplotypeScore=146.1505;InbreedingCoeff=0.2088;MQ=56.43;MQ0=1;MQRankSum=-5.314;QD=6.93;ReadPosRankSum=1.712;VQSLOD=2.7281;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:22,4:28:20.10:295,20,0	0/0:7,0:7:21.06:0,21,763	0/0:3,0:2:2.97:0,3,20	0/0:4,0:4:2.90:0,3,16	0/0:21,0:21:57.11:0,57,2086	0/0:19,0:19:51.10:0,51,1921	0/0:19,0:19:57.09:0,57,1606	0/1:22,0:19:74.85:75,0,258	0/1:9,0:9:33.17:33,0,906	0/0:24,0:24:15.64:0,16,2712	0/0:19,0:19:54.17:0,54,2336	0/0:10,0:10:30.10:0,30,1223	0/0:8,0:8:21.07:0,21,1059	0/0:12,0:12:33.10:0,33,911	0/1:14,0:14:40.77:41,0,62	0/0:9,0:9:18.06:0,18,732	1/1:1,19:24:20.96:429,21,0	0/1:28,0:28:31.36:31,0,89	0/0:19,0:19:53.76:0,54,1866	0/0:23,0:23:56.75:0,57,2186	0/0:28,0:28:78.16:0,78,2786	0/0:16,0:16:48.15:0,48,1995	0/0:17,0:17:51.18:0,51,2215	0/0:30,0:30:78.13:0,78,3315	1/1:9,0:9:3.01:52,3,0	0/1:18,0:18:99:342,0,155	0/1:15,0:15:35.39:50,0,35	0/1:10,0:10:31.97:42,0,32
chr10	3628903	.	TGCGCGCGTGCGCGCGC	T	2028.96	PASS	AB=0.993;AC=14;AF=0.269;AN=52;BaseQRankSum=8.587;DP=465;FS=4.710;HRun=0;HaplotypeScore=187.4433;InbreedingCoeff=0.2918;MQ=53.72;MQ0=3;MQRankSum=-5.008;QD=11.94;ReadPosRankSum=-0.258;VQSLOD=2.5833;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:30:14.75:0,15,159	0/0:7,0:7:18.06:0,18,1102	./.	./.	0/0:21,0:21:54.17:0,54,3170	0/0:17,0:17:48.16:0,48,2752	0/0:19,0:19:48.12:0,48,2153	1/1:10,11:17:22.09:435,22,0	0/1:9,0:9:82.97:83,0,1315	0/1:23,1:24:65.20:65,0,3879	0/0:20,0:20:57.18:0,57,3449	0/0:12,0:12:33.11:0,33,1888	0/0:8,0:8:21.07:0,21,1522	0/0:12,0:12:33.11:0,33,1518	0/1:13,0:13:18.09:101,0,18	0/0:9,0:9:21.07:0,21,1188	0/1:23,0:23:99:144,0,129	0/1:28,0:28:51.96:112,0,52	0/0:19,0:19:45.15:0,45,2688	0/0:23,0:23:50.78:0,51,3122	0/0:29,0:29:66.23:0,66,4071	0/0:16,0:16:48.15:0,48,3012	0/0:17,0:17:51.18:0,51,3207	0/0:30,0:30:75.21:0,75,4838	1/1:9,0:9:3.01:106,3,0	0/1:18,0:18:99:875,0,184	1/1:14,0:14:4.97:142,5,0	1/1:11,0:11:3.01:124,3,0
chr10	3628906	.	GCGCGTGCGCGCGCGCGCA	G	2463.12	PASS	AB=0.921;AC=14;AF=0.269;AN=52;BaseQRankSum=8.648;DP=474;FS=3.451;HRun=0;HaplotypeScore=201.0848;InbreedingCoeff=0.2927;MQ=53.37;MQ0=5;MQRankSum=-4.578;QD=13.84;ReadPosRankSum=0.408;VQSLOD=2.6009;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:31:20.78:0,21,340	0/0:7,0:7:18.06:0,18,1190	./.	./.	0/0:21,0:21:57.18:0,57,3538	0/0:18,0:18:51.17:0,51,3004	0/0:17,0:17:51.13:0,51,2323	1/1:20,0:15:20.33:432,20,0	0/1:9,0:9:99:116,0,1383	0/1:28,0:28:50.26:50,0,4597	0/0:20,0:20:57.18:0,57,3624	0/0:13,0:13:36.12:0,36,2142	0/0:8,0:8:21.07:0,21,1648	0/0:12,0:12:36.12:0,36,1728	0/1:12,0:12:18.09:135,0,18	0/0:9,0:9:21.07:0,21,1304	0/1:23,0:23:99:144,0,235	0/1:31,0:31:51.93:178,0,52	0/0:19,0:19:45.15:0,45,2879	0/0:21,0:21:51.11:0,51,3297	0/0:30,0:29:75.26:0,75,4670	0/0:16,0:16:48.15:0,48,3258	0/0:17,0:17:51.18:0,51,3426	0/0:31,0:31:81.23:0,81,5482	1/1:11,0:11:3.01:139,3,0	0/1:2,16:19:99:1094,0,167	1/1:2,12:14:4.93:175,5,0	1/1:2,9:11:3.01:157,3,0
chr10	3628907	.	CGCGT	C	560.86	PASS	AB=1.000;AC=19;AF=0.365;AN=52;BaseQRankSum=8.847;DP=470;FS=1.573;HRun=0;HaplotypeScore=104.1523;InbreedingCoeff=0.6167;MQ=53.80;MQ0=5;MQRankSum=-5.499;QD=3.10;ReadPosRankSum=1.824;VQSLOD=2.1003;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:32,1:32:15.02:143,15,0	0/1:8,0:8:3.82:4,0,342	./.	./.	0/0:20,0:20:51.13:0,51,1039	0/0:18,0:18:45.12:0,45,926	0/0:18,0:18:42.10:0,42,758	1/1:14,0:9:6.01:57,6,0	0/1:9,0:9:3.93:4,0,391	0/0:27,0:27:36.53:0,37,1334	0/0:21,0:21:56.76:0,57,1079	0/0:13,0:13:36.07:0,36,598	0/0:8,0:8:21.06:0,21,481	0/0:12,0:12:35.92:0,36,432	1/1:13,0:13:3.47:29,3,0	0/0:9,0:9:21.04:0,21,360	1/1:20,3:23:20.90:218,21,0	1/1:31,0:31:3:28,3,0	0/0:19,0:19:48.08:0,48,910	0/0:21,0:21:51.13:0,51,967	0/0:32,0:31:76.57:0,77,1328	0/0:16,0:16:45.10:0,45,961	0/0:18,0:18:53.97:0,54,1079	0/0:32,0:32:77.72:0,78,1734	1/1:11,0:11:3:28,3,0	0/1:18,0:18:29.25:164,0,29	1/1:12,0:12:2.87:28,3,0	1/1:9,0:9:3:28,3,0
chr10	3628908	.	GCGTGCGCGCGCGCGCACA	G	2174.02	PASS	AB=0.980;AC=15;AF=0.288;AN=52;BaseQRankSum=8.063;DP=469;FS=2.623;HRun=0;HaplotypeScore=196.8266;InbreedingCoeff=0.3391;MQ=53.65;MQ0=7;MQRankSum=-4.726;QD=13.02;ReadPosRankSum=1.450;VQSLOD=2.7454;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:32:6.42:0,6,289	0/0:7,0:7:21.07:0,21,1225	./.	./.	0/0:21,0:21:60.19:0,60,3596	0/0:18,0:18:51.14:0,51,2736	0/0:18,0:17:45.14:0,45,2188	0/1:14,0:9:10.96:248,0,11	0/1:8,1:9:99:133,0,1266	0/1:27,0:27:34.48:34,0,4442	0/0:21,0:21:57.20:0,57,3450	0/0:13,0:13:36.12:0,36,2012	0/0:8,0:8:21.07:0,21,1582	0/0:12,0:12:36.12:0,36,1567	1/1:2,11:13:3.89:159,4,0	0/0:9,0:9:21.07:0,21,1217	0/1:23,0:23:99:195,0,239	1/1:6,25:31:6.02:228,6,0	0/0:18,0:18:48.16:0,48,2746	0/0:21,0:21:51.11:0,51,3064	0/0:33,0:31:81.28:0,81,4702	0/0:16,0:16:45.15:0,45,3099	0/0:18,0:18:54.19:0,54,3406	0/0:31,0:31:81.23:0,81,5483	1/1:2,9:11:3.01:157,3,0	0/1:18,0:18:99:897,0,146	1/1:12,0:12:1.96:138,2,0	1/1:9,0:9:3.01:137,3,0
chr10	3628922	.	GCA	G	194.60	PASS	AB=0.934;AC=18;AF=0.346;AN=52;BaseQRankSum=4.470;DP=461;FS=0.751;HRun=0;HaplotypeScore=90.3441;InbreedingCoeff=0.2808;MQ=51.73;MQ0=9;MQRankSum=-1.337;QD=0.93;ReadPosRankSum=-0.304;VQSLOD=1.0089;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:14:0,14,99	0/0:7,0:7:5.93:0,6,123	./.	./.	0/0:22,0:22:22.19:0,22,476	0/0:16,0:16:15.05:0,15,226	0/1:14,3:16:12.63:13,0,188	0/1:21,0:16:10.38:10,0,20	0/0:8,0:8:0.72:0,1,126	0/1:28,0:28:5.33:5,0,482	0/1:17,2:19:70.15:70,0,220	0/0:11,0:12:21.04:0,21,267	0/0:9,0:9:2.20:0,2,206	0/0:6,0:6:15.02:0,15,169	1/1:11,0:11:2.84:14,3,0	0/0:7,0:7:12.03:0,12,161	0/0:21,0:21:21.05:0,21,147	1/1:26,0:26:5.74:30,6,0	0/1:16,1:17:8.98:9,0,266	0/1:17,2:19:9.34:9,0,211	0/0:36,0:34:19.38:0,19,566	0/0:24,0:24:31.58:0,32,444	0/0:17,0:17:27.08:0,27,383	0/0:31,0:29:29.45:0,29,724	1/1:10,0:10:2.84:14,3,0	1/1:18,0:18:23.35:139,23,0	1/1:14,0:14:2.53:18,3,0	1/1:9,0:9:2.94:18,3,0
chr10	3629150	.	GTCTTAGGATCATATGTGGAATCCCAGTGA	G	46.96	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.051;DP=678;FS=0.000;HRun=0;HaplotypeScore=487.2082;InbreedingCoeff=0.7651;MQ=74.01;MQ0=0;MQRankSum=-1.465;QD=2.61;ReadPosRankSum=-0.136;VQSLOD=0.0327;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:56.66:0,57,3456	0/0:10,0:10:27.09:0,27,2969	0/0:26,0:26:40.69:0,41,2118	0/0:21,0:20:24.08:0,24,762	0/0:19,0:19:42.14:0,42,4686	0/0:25,0:25:54.19:0,54,5762	0/0:27,0:27:48.16:0,48,4645	0/0:37,0:37:39.13:0,39,2028	0/0:20,0:20:42.14:0,42,4823	0/0:31,0:31:70.48:0,70,7892	0/0:18,0:18:42.14:0,42,4681	0/0:24,0:24:48.16:0,48,5264	0/0:22,0:22:48.16:0,48,5650	0/0:9,0:9:18.06:0,18,1774	0/0:46,0:46:99:0,123,10086	0/0:24,0:24:42.13:0,42,4250	1/1:14,4:18:2.97:124,3,0	0/0:23,0:23:29.58:0,30,1941	0/0:11,0:11:18.06:0,18,1496	0/0:7,0:7:18.06:0,18,2248	0/0:31,0:31:60.21:0,60,6234	0/0:21,0:21:36.12:0,36,3550	0/0:16,0:16:34.36:0,34,3906	0/0:21,0:21:51.18:0,51,5181	0/0:77,0:78:99:0,215,17991	0/0:23,0:23:51.18:0,51,5850	0/0:28,0:28:60.19:0,60,5785	0/0:11,0:11:27.09:0,27,2603
chr10	3630719	.	TAA	T	9361.13	PASS	AB=0.516;AC=17;AF=0.304;AN=56;BaseQRankSum=20.151;DP=746;FS=1.295;HRun=2;HaplotypeScore=124.4383;InbreedingCoeff=0.9155;MQ=87.36;MQ0=0;MQRankSum=-3.851;QD=38.37;ReadPosRankSum=3.365;VQSLOD=5.0856;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,52:52:99:1992,132,0	0/0:17,0:17:51.12:0,51,994	0/0:27,0:27:81.16:0,81,1461	0/0:27,0:27:78.27:0,78,1522	0/0:29,0:29:87.30:0,87,1754	0/0:18,0:18:54.19:0,54,1076	0/0:27,0:27:81.26:0,81,1546	1/1:0,33:33:96.29:1397,96,0	0/0:30,0:30:90.31:0,90,1809	0/0:37,0:37:99:0,111,2229	0/0:17,0:17:51.17:0,51,1003	0/0:20,0:20:60.21:0,60,1219	0/0:28,0:28:84.29:0,84,1687	0/0:28,0:28:84.29:0,84,1686	1/1:0,28:28:81.21:1205,81,0	0/0:33,0:33:99:0,99,1945	1/1:0,21:21:45.15:688,45,0	1/1:0,20:20:54.18:826,54,0	0/0:26,0:26:78.26:0,78,1538	0/0:25,0:25:75.24:0,75,1467	0/0:41,0:41:99:0,120,2243	0/0:24,0:24:72.25:0,72,1461	0/0:22,0:22:66.16:0,66,1298	0/0:26,0:26:75.26:0,75,1511	1/1:0,21:21:54.12:798,54,0	0/1:2,30:32:28.66:1217,0,29	1/1:0,25:25:54.18:824,54,0	1/1:3,9:12:27.09:414,27,0
chr10	3631156	.	T	TGG	1234.81	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=0.349;DP=678;FS=4.173;HRun=8;HaplotypeScore=105.4773;InbreedingCoeff=0.8893;MQ=78.11;MQ0=0;MQRankSum=-1.035;QD=13.57;ReadPosRankSum=-0.911;VQSLOD=1.0721;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:41:99:0,111,1210	0/0:12,0:12:33.08:0,33,367	0/0:20,0:20:36.04:0,36,388	0/0:19,0:19:26.26:0,26,245	0/0:18,0:18:39.06:0,39,415	0/0:23,0:23:63.17:0,63,701	0/0:24,0:24:60.11:0,60,649	0/0:31,0:31:60.09:0,60,659	0/0:20,0:20:57.15:0,57,635	0/0:24,0:24:48.10:0,48,535	0/0:26,0:26:66.12:0,66,716	0/0:34,0:34:78.16:0,78,869	0/0:27,0:27:69.15:0,69,760	0/0:21,0:21:54.13:0,54,602	1/1:11,10:24:23.33:313,23,0	0/0:22,0:22:63.17:0,63,702	0/1:20,0:20:2.31:2,0,297	1/1:5,19:26:50.14:732,50,0	0/0:20,0:21:53.87:0,54,575	0/0:19,0:19:51.10:0,51,558	0/0:39,0:39:91.44:0,91,1005	0/0:28,0:28:75.18:0,75,822	0/0:23,0:23:34.68:0,35,601	0/0:20,0:20:45.08:0,45,492	1/1:9,12:21:21.07:331,21,0	0/0:35,0:35:81.17:0,81,892	0/0:28,0:28:72.16:0,72,790	0/0:12,0:12:33.08:0,33,368
chr10	3631432	.	GT	G	10480.41	PASS	AB=0.526;AC=17;AF=0.304;AN=56;BaseQRankSum=18.503;DP=826;FS=0.000;HRun=1;HaplotypeScore=93.2420;InbreedingCoeff=0.9155;MQ=70.38;MQ0=0;MQRankSum=-3.780;QD=37.84;ReadPosRankSum=1.372;VQSLOD=5.0879;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,51:51:99:1818,132,0	0/0:15,0:15:42.14:0,42,671	0/0:27,0:26:78.25:0,78,1172	0/0:29,0:29:84.19:0,84,1194	0/0:25,0:25:75.26:0,75,1196	0/0:30,0:30:87.28:0,87,1363	0/0:33,0:33:99:0,99,1532	1/1:0,30:30:90.27:1237,90,0	0/0:26,0:26:75.26:0,75,1199	0/0:35,0:35:99:0,105,1657	0/0:27,0:27:78.27:0,78,1247	0/0:38,0:38:99:0,111,1768	0/0:32,0:32:96.33:0,96,1526	0/0:40,0:40:99:0,120,1893	1/1:0,31:31:93.31:1299,93,0	0/0:29,0:29:87.30:0,87,1391	1/1:0,22:22:60.20:839,60,0	1/1:0,27:27:72.24:1007,72,0	0/0:27,0:27:81.28:0,81,1284	0/0:26,0:26:78.25:0,78,1211	0/0:31,0:31:93.27:0,93,1437	0/0:31,0:31:90.31:0,90,1437	0/0:23,0:23:69.24:0,69,1100	0/0:25,0:25:75.25:0,75,1179	1/1:0,34:34:90.30:1259,90,0	0/1:4,37:41:68.50:1429,0,69	1/1:0,30:30:81.27:1132,81,0	1/1:0,11:11:33.11:461,33,0
chr10	3631578	.	T	TCTCCCTGCCCC	22502.88	PASS	AB=0.625;AC=17;AF=0.304;AN=56;BaseQRankSum=-4.943;DP=753;FS=9.861;HRun=0;HaplotypeScore=217.4620;InbreedingCoeff=0.9181;MQ=84.35;MQ0=0;MQRankSum=-14.965;QD=96.58;ReadPosRankSum=-1.504;VQSLOD=3.6546;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:13,16:40:60.21:3077,60,0	0/0:9,0:9:27.07:0,27,737	0/0:27,0:27:71.33:0,71,2013	0/0:25,0:26:68.77:0,69,1978	0/0:15,0:15:45.13:0,45,1316	0/0:25,0:25:72.19:0,72,2187	0/0:39,0:39:99:0,108,3404	1/1:8,3:26:75.12:2722,75,0	0/0:26,0:26:75.20:0,75,2246	0/0:26,0:27:59.25:0,59,2276	0/0:14,0:14:42.14:0,42,1294	0/0:34,0:34:96.29:0,96,3033	0/0:23,0:23:69.22:0,69,2378	0/0:36,0:36:99:0,105,3306	1/1:5,19:31:69.71:3766,70,0	0/0:28,0:28:81.25:0,81,2570	1/1:15,6:20:51.01:1814,51,0	1/1:6,6:20:30.10:1564,30,0	0/0:28,0:28:78.22:0,78,2273	0/0:24,0:24:69.20:0,69,2161	0/0:59,0:59:99:0,171,5469	0/0:22,0:22:66.20:0,66,2120	0/0:15,0:15:42.58:0,43,1240	0/0:43,0:43:99:0,122,3953	1/1:5,10:25:36.12:1934,36,0	0/1:14,7:35:13.82:3507,0,14	1/1:9,13:27:57.20:2970,57,0	1/1:1,6:8:21.07:1148,21,0
chr10	3632589	.	ACACT	A	1378.46	PASS	AB=0.950;AC=15;AF=0.278;AN=54;BaseQRankSum=8.319;DP=576;FS=15.839;HRun=0;HaplotypeScore=96.7537;InbreedingCoeff=0.8069;MQ=65.08;MQ0=13;MQRankSum=-6.244;QD=15.32;ReadPosRankSum=0.823;VQSLOD=2.3136;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,0:7:3.01:54,3,0	0/0:9,0:9:24.08:0,24,590	0/0:39,0:26:69.20:0,69,1543	0/0:40,0:29:78.22:0,78,1666	0/0:8,0:8:24.08:0,24,623	0/0:18,0:18:51.16:0,51,1179	0/0:47,0:47:99:0,132,3298	./.	0/0:27,0:27:69.22:0,69,1678	0/0:19,0:19:48.16:0,48,1160	0/0:14,0:14:39.13:0,39,971	0/0:37,0:37:99:0,102,2568	0/0:32,0:32:90.31:0,90,2271	0/0:38,0:38:99:0,108,2761	1/1:3,18:21:29.81:515,30,0	0/0:31,0:31:81.26:0,81,2001	1/1:11,3:14:21.07:362,21,0	1/1:3,7:10:15.02:236,15,0	0/1:18,1:15:14.73:15,0,866	0/0:14,0:14:33.11:0,33,809	0/0:48,0:48:99:0,132,3338	0/0:12,0:12:36.12:0,36,927	0/0:9,0:9:27.09:0,27,693	0/0:37,0:37:84.22:0,84,2007	1/1:4,0:4:3.01:54,3,0	0/0:5,0:5:9.02:0,9,178	1/1:3,5:8:9.03:161,9,0	1/1:4,3:7:9.03:161,9,0
chr10	3632737	.	G	GAC	11485.46	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-3.834;DP=923;FS=4.670;HRun=0;HaplotypeScore=129.7138;InbreedingCoeff=0.9581;MQ=63.22;MQ0=5;MQRankSum=-1.121;QD=43.02;ReadPosRankSum=2.728;VQSLOD=6.3950;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,49:52:99:2244,126,0	0/0:9,0:9:23.95:0,24,309	0/0:33,0:28:69.08:0,69,890	0/0:45,0:39:86.02:0,86,1057	0/0:9,0:9:27.07:0,27,360	0/0:28,0:28:81.24:0,81,1098	0/0:55,0:55:99:0,150,2064	1/1:4,10:13:24.06:377,24,0	0/0:35,0:35:87.26:0,87,1182	0/0:33,0:33:87.28:0,87,1190	0/0:19,0:19:45.08:0,45,573	0/0:53,0:53:99:0,144,1940	0/0:37,0:37:99:0,108,1432	0/0:59,0:59:99:0,169,2299	1/1:2,50:52:99:2319,129,0	0/0:29,0:30:50.45:0,50,1139	1/1:4,41:45:99:2343,132,0	1/1:4,20:26:69.21:1171,69,0	0/0:15,0:15:36.12:0,36,501	0/0:14,0:14:33.03:0,33,421	0/0:97,0:97:99:0,270,3732	0/0:23,0:23:60.18:0,60,821	0/0:15,0:15:36.12:0,36,496	0/0:46,0:46:99:0,132,1830	1/1:2,24:27:54.19:970,54,0	1/1:3,14:16:0.12:660,0,0	1/1:0,16:15:42.14:755,42,0	1/1:1,12:13:36.12:647,36,0
chr10	3632848	.	C	CA	3228.29	PASS	AB=0.532;AC=5;AF=0.089;AN=56;BaseQRankSum=8.615;DP=907;FS=0.908;HRun=1;HaplotypeScore=110.8678;InbreedingCoeff=0.7712;MQ=56.00;MQ0=40;MQRankSum=1.592;QD=31.96;ReadPosRankSum=2.291;VQSLOD=3.4711;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:48:99:0,114,1480	0/0:9,0:8:18.06:0,18,234	0/0:27,0:11:24.08:0,24,307	0/0:38,0:14:42.09:0,42,497	0/0:15,0:13:39.11:0,39,492	0/0:21,0:21:51.62:0,52,647	0/0:38,0:38:99:0,100,1395	0/0:12,0:12:27.09:0,27,350	0/0:36,0:36:99:0,108,1401	0/0:39,0:39:99:0,111,1431	0/0:16,0:16:39.11:0,39,490	0/0:47,0:47:99:0,141,1799	0/0:40,0:40:99:0,111,1426	0/0:44,0:44:99:0,126,1621	1/1:0,43:42:99:1663,111,0	0/0:37,0:37:99:0,102,1324	0/0:44,0:42:99:0,123,1596	0/1:4,29:30:29.64:956,0,30	0/0:20,0:15:45.15:0,45,583	0/0:17,0:17:38.92:0,39,505	0/0:124,0:122:99:0,334,4260	0/0:33,0:33:93.29:0,93,1192	0/0:13,0:13:29.89:0,30,386	0/0:41,0:41:99:0,120,1557	1/1:5,20:21:51.13:739,51,0	0/0:21,0:21:51.14:0,51,646	0/0:17,0:16:36.12:0,36,462	0/0:7,0:6:15.05:0,15,193
chr10	3632977	.	AC	A	595.99	PASS	AB=0.695;AC=11;AF=0.204;AN=54;BaseQRankSum=7.684;DP=670;FS=0.000;HRun=2;HaplotypeScore=85.9553;InbreedingCoeff=0.5317;MQ=73.35;MQ0=3;MQRankSum=-6.608;QD=10.84;ReadPosRankSum=-1.217;VQSLOD=1.1954;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,7:8:21.03:241,21,0	0/0:12,0:12:36.09:0,36,515	0/0:28,0:21:63.18:0,63,898	0/0:24,0:23:63.21:0,63,904	0/0:7,0:7:15.04:0,15,225	0/0:20,0:20:60.18:0,60,859	0/0:38,0:38:99:0,105,1571	0/0:5,0:1:3.01:0,3,39	0/0:37,0:37:99:0,108,1594	0/0:35,0:35:99:0,102,1472	0/0:12,0:12:30.10:0,30,433	0/0:51,0:51:99:0,150,2215	0/0:37,0:37:99:0,108,1579	0/0:44,1:45:93.48:0,93,1874	1/1:3,9:11:9.03:117,9,0	0/0:33,0:33:99:0,99,1484	0/1:4,5:6:32.57:105,0,33	0/1:4,2:4:32.91:33,0,39	0/0:18,0:18:51.14:0,51,738	0/0:15,0:15:42.14:0,42,629	0/0:127,0:125:99:0,367,5415	0/0:12,0:12:36.12:0,36,539	0/0:7,0:7:21.07:0,21,315	0/0:51,0:51:99:0,147,2159	./.	0/1:5,4:7:71.29:138,0,71	1/1:3,2:5:6.02:78,6,0	1/1:3,1:4:3.01:39,3,0
chr10	3633060	.	A	AC	349.40	PASS	AB=0.739;AC=5;AF=0.093;AN=54;BaseQRankSum=6.223;DP=926;FS=10.823;HRun=1;HaplotypeScore=108.4248;InbreedingCoeff=0.3074;MQ=54.21;MQ0=25;MQRankSum=-5.122;QD=5.92;ReadPosRankSum=-0.387;VQSLOD=-0.6289;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,5:29:28.16:0,28,561	0/0:12,0:12:21.04:0,21,255	./.	0/0:32,0:11:30.09:0,30,365	0/0:16,0:16:21.05:0,21,257	0/0:34,0:33:78.24:0,78,995	0/0:48,0:48:99:0,138,1750	0/0:15,1:7:15.05:0,15,195	0/0:31,0:31:90.28:0,90,1153	0/0:42,0:38:99:0,99,1251	0/0:16,0:15:39.09:0,39,487	0/0:59,0:59:99:0,160,2064	0/0:44,0:44:99:0,99,1495	0/0:65,0:65:99:0,175,2243	0/0:28,1:22:45.13:0,45,569	0/0:38,0:38:99:0,99,1285	0/0:30,6:25:6.29:0,6,578	0/1:18,3:14:8.79:9,0,392	0/0:23,0:21:60.19:0,60,777	0/0:14,0:13:33.11:0,33,427	0/0:124,3:123:99:0,352,4524	0/0:16,0:16:42.14:0,42,544	0/0:12,0:12:36.12:0,36,461	0/0:49,0:49:99:0,141,1829	0/0:31,0:21:14.99:0,15,192	0/1:12,6:13:68.44:68,0,174	0/1:4,9:11:19.62:208,0,20	1/1:3,4:5:12.04:180,12,0
chr10	3633329	.	AC	A	678.59	PASS	AB=0.792;AC=5;AF=0.093;AN=54;BaseQRankSum=7.787;DP=746;FS=0.000;HRun=2;HaplotypeScore=89.5792;InbreedingCoeff=-0.1373;MQ=46.89;MQ0=58;MQRankSum=-3.409;QD=3.97;ReadPosRankSum=1.195;VQSLOD=0.4346;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:29,12:25:99:217,0,286	0/0:6,0:6:6.91:0,7,92	./.	0/0:32,1:1:3.01:0,3,45	0/0:16,0:16:15.05:0,15,225	0/0:10,0:9:24.08:0,24,358	0/0:44,0:43:89.91:0,90,1281	0/0:8,0:5:15.05:0,15,224	0/0:40,0:40:75.24:0,75,1104	0/0:28,0:24:72.24:0,72,1076	0/0:9,0:8:9.03:0,9,135	0/0:41,0:41:98.93:0,99,1391	0/0:35,0:35:71.87:0,72,1058	0/0:48,0:48:99:0,114,1662	0/1:24,18:20:56.69:303,0,57	0/0:30,0:30:78.26:0,78,1169	0/1:29,5:22:20.88:21,0,203	0/1:25,8:17:99:160,0,125	0/0:15,0:10:27.09:0,27,404	0/0:11,0:11:11.67:0,12,179	0/0:111,0:103:99:0,237,3346	0/0:5,0:5:9.03:0,9,135	0/0:6,0:4:6.02:0,6,90	0/0:30,0:30:75.25:0,75,1124	0/1:16,5:16:47.40:92,0,47	0/0:11,0:5:15.05:0,15,223	0/0:8,1:3:3.01:0,3,45	0/0:9,0:7:9.03:0,9,135
chr10	3633520	.	ACAGGGTGAGCACACTCACCAG	A	330.94	PASS	AB=0.989;AC=13;AF=0.250;AN=52;BaseQRankSum=5.966;DP=592;FS=17.523;HRun=0;HaplotypeScore=243.3631;InbreedingCoeff=0.6309;MQ=59.55;MQ0=29;MQRankSum=-4.554;QD=2.88;ReadPosRankSum=-0.382;VQSLOD=1.1476;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,0:5:4.56:40,5,0	0/0:5,0:5:15.05:0,15,237	0/1:27,0:9:17.69:18,0,78	0/0:22,0:7:17.93:0,18,183	0/0:11,0:10:21.07:0,21,343	0/0:16,0:15:27.04:0,27,444	0/0:35,0:32:63.21:0,63,1269	./.	0/0:28,0:28:51.17:0,51,1171	0/0:27,0:25:66.16:0,66,1079	0/0:7,0:6:9.03:0,9,144	0/0:35,0:35:69.22:0,69,1261	0/0:27,0:27:44.15:0,44,791	0/0:45,0:45:67.24:0,67,1240	1/1:17,0:7:10.58:130,11,0	0/0:17,0:17:39.13:0,39,858	0/1:26,0:15:45.15:45,0,48	1/1:14,0:7:7.24:76,7,0	0/0:16,0:14:42.14:0,42,666	0/0:17,0:15:20.38:0,20,316	0/0:118,0:113:99:0,243,4733	0/0:12,0:12:18.06:0,18,314	0/0:7,0:6:15.03:0,15,241	0/0:31,0:29:69.23:0,69,1347	0/1:11,0:7:0.04:0,0,1	1/1:1,5:4:6.02:80,6,0	./.	1/1:5,0:3:6.02:95,6,0
chr10	3633642	.	AC	A	216.68	PASS	AB=0.787;AC=5;AF=0.104;AN=48;BaseQRankSum=5.308;DP=510;FS=2.988;HRun=2;HaplotypeScore=64.1595;InbreedingCoeff=0.0393;MQ=50.92;MQ0=43;MQRankSum=-5.262;QD=3.74;ReadPosRankSum=1.041;VQSLOD=0.5797;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:15,3:5:0.89:2,1,0	0/0:9,0:8:18.01:0,18,243	0/0:21,0:5:11.97:0,12,152	0/0:29,2:1:3.01:0,3,35	0/0:14,0:13:15.05:0,15,224	0/0:9,0:9:21.07:0,21,313	0/0:29,0:29:81.23:0,81,1185	./.	0/0:19,0:17:45.15:0,45,674	0/0:17,0:16:39.11:0,39,560	0/0:8,0:7:6.02:0,6,90	0/0:30,0:28:81.26:0,81,1193	0/0:16,0:16:33.10:0,33,475	0/0:40,0:38:99:0,111,1622	0/1:8,4:7:35.94:69,0,36	0/0:17,0:17:51.16:0,51,740	0/1:9,5:8:62.77:138,0,63	0/1:12,2:11:99:107,0,198	0/0:15,0:10:27.09:0,27,404	0/0:13,0:10:18.03:0,18,270	0/0:99,0:91:99:0,190,2743	0/0:7,0:5:9.02:0,9,115	0/0:5,0:5:6.02:0,6,90	0/0:27,0:24:69.20:0,69,993	./.	./.	0/0:2,0:2:3.01:0,3,44	./.
chr10	3633851	.	AC	A	638.59	PASS	AB=0.618;AC=7;AF=0.125;AN=56;BaseQRankSum=7.808;DP=566;FS=38.838;HRun=2;HaplotypeScore=79.5973;InbreedingCoeff=0.3815;MQ=59.09;MQ0=8;MQRankSum=-7.266;QD=14.85;ReadPosRankSum=-0.260;VQSLOD=1.2043;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:6,4:8:9.03:0,9,135	0/0:13,0:13:35.99:0,36,493	0/0:21,0:18:45.14:0,45,627	0/0:27,0:19:48.13:0,48,629	0/0:12,0:12:30.10:0,30,450	0/0:13,0:13:36.11:0,36,514	0/0:36,0:36:99:0,105,1514	0/0:15,0:12:5.45:0,5,421	0/0:19,0:19:54.17:0,54,788	0/0:24,0:24:69.23:0,69,1029	0/0:10,0:10:24.08:0,24,359	0/0:39,0:39:99:0,111,1642	0/0:14,0:14:42.14:0,42,625	0/0:36,0:36:99:0,99,1479	0/1:1,8:8:26.79:176,0,27	0/0:23,0:23:66.21:0,66,969	1/1:2,5:5:12.04:155,12,0	0/1:4,7:11:81.64:191,0,82	0/0:17,0:16:48.13:0,48,674	0/0:10,0:10:30.10:0,30,449	0/0:115,0:113:99:0,310,4556	0/0:15,0:15:42.13:0,42,609	0/0:9,0:9:27.09:0,27,397	0/0:28,0:28:81.26:0,81,1194	0/0:11,1:6:2.97:0,3,20	0/1:6,4:9:99:134,0,113	1/1:1,5:5:9.03:116,9,0	0/0:4,1:3:3.01:0,3,45
chr10	3633872	.	A	AC	3216.63	PASS	AB=0.572;AC=11;AF=0.196;AN=56;BaseQRankSum=7.627;DP=638;FS=28.424;HRun=1;HaplotypeScore=93.7024;InbreedingCoeff=0.2646;MQ=66.63;MQ0=2;MQRankSum=-6.873;QD=23.14;ReadPosRankSum=-3.141;VQSLOD=1.6137;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:4,14:17:69.09:436,0,69	0/0:17,0:17:42.14:0,42,545	0/0:20,0:20:56.88:0,57,679	0/0:27,0:24:61.38:0,61,766	0/0:15,0:15:33.09:0,33,414	0/0:18,0:18:51.11:0,51,627	0/0:42,0:42:99:0,123,1564	0/1:12,9:20:99:308,0,280	0/0:23,0:23:69.12:0,69,872	0/0:21,0:21:60.19:0,60,761	0/0:6,0:6:18.06:0,18,233	0/0:41,0:41:99:0,111,1398	0/0:19,0:19:54.18:0,54,699	0/0:36,0:36:99:0,102,1294	0/1:1,17:15:2.59:457,0,3	0/0:29,0:29:84.27:0,84,1091	0/1:3,12:13:41.73:383,0,42	0/1:2,15:16:29.76:581,0,30	0/0:16,1:16:45.14:0,45,572	0/0:13,0:13:30.10:0,30,389	0/0:100,1:101:99:0,262,3335	0/0:15,0:15:39.13:0,39,506	0/0:9,0:9:24.08:0,24,312	0/0:30,0:30:87.27:0,87,1114	1/1:6,8:11:21.06:296,21,0	0/1:4,12:13:83.65:305,0,84	1/1:0,12:11:27.09:404,27,0	0/1:2,6:6:20.89:207,0,21
chr10	3634009	.	CT	C	8263.30	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=19.093;DP=735;FS=2.925;HRun=4;HaplotypeScore=102.8839;InbreedingCoeff=0.9975;MQ=79.33;MQ0=0;MQRankSum=-5.884;QD=30.95;ReadPosRankSum=1.666;VQSLOD=4.8143;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,34:34:81.25:971,81,0	0/0:17,0:17:48.16:0,48,670	0/0:24,0:24:60.16:0,60,775	0/0:19,0:19:48.12:0,48,582	0/0:26,0:26:66.17:0,66,898	0/0:29,0:29:81.25:0,81,1115	0/0:28,0:28:81.24:0,81,1099	1/1:7,25:32:75.22:888,75,0	0/0:31,0:31:90.30:0,90,1260	0/0:34,0:34:99:0,99,1369	0/0:13,0:13:33.09:0,33,430	0/0:30,0:30:84.28:0,84,1176	0/0:22,0:22:57.19:0,57,798	0/0:23,0:23:66.21:0,66,909	1/1:1,44:44:99:1439,120,0	0/0:36,0:36:99:0,105,1470	1/1:0,41:40:99:1403,117,0	1/1:0,29:29:84.26:1007,84,0	0/0:22,0:22:66.20:0,66,894	0/0:19,0:19:54.10:0,54,698	0/0:34,0:34:96.29:0,96,1308	0/0:22,0:22:57.18:0,57,780	0/0:15,0:15:39.11:0,39,515	0/0:24,0:24:69.23:0,69,966	1/1:1,27:28:66.01:774,66,0	1/1:0,24:24:69.21:827,69,0	1/1:0,26:26:66.16:775,66,0	1/1:0,8:6:15.05:180,15,0
chr10	3635344	.	A	ATGTG	7238.28	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=18.122;DP=964;FS=12.184;HRun=0;HaplotypeScore=181.3911;InbreedingCoeff=0.9399;MQ=61.44;MQ0=7;MQRankSum=-1.703;QD=25.31;ReadPosRankSum=3.945;VQSLOD=4.0378;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:13,28:44:71.82:1678,72,0	0/0:13,0:13:36.11:0,36,587	0/0:42,0:27:36.01:0,36,483	0/0:38,0:25:15.77:0,16,566	0/0:37,0:38:80.96:0,81,1317	0/0:30,0:30:57.18:0,57,944	0/0:32,0:33:75.21:0,75,1189	1/1:9,0:28:0.61:185,1,0	0/0:33,0:33:90.27:0,90,1453	0/0:38,0:38:96.33:0,96,1624	0/0:22,0:23:48.12:0,48,733	0/0:41,0:43:99:0,111,1842	0/0:36,0:36:90.29:0,90,1503	0/0:37,0:37:93.28:0,93,1509	1/1:7,31:39:81.07:1947,81,0	0/0:44,0:44:99:0,108,1776	1/1:6,0:30:10.50:213,11,0	1/1:7,19:28:44.77:1003,45,0	0/0:17,0:15:30.10:0,30,512	0/0:44,0:44:99:0,108,1725	0/0:74,0:73:99:0,190,3207	0/0:28,0:28:78.25:0,78,1303	0/0:34,0:34:93.26:0,93,1519	0/0:31,0:32:87.25:0,87,1403	1/1:9,26:36:61.67:1571,62,0	1/1:9,0:35:24.12:278,24,0	1/1:7,0:32:7.84:201,8,0	1/1:1,0:14:36.37:163,36,0
chr10	3636745	.	C	CT	3008.47	PASS	AB=0.818;AC=16;AF=0.286;AN=56;BaseQRankSum=11.826;DP=707;FS=3.153;HRun=11;HaplotypeScore=99.8784;InbreedingCoeff=0.7997;MQ=67.66;MQ0=0;MQRankSum=-2.312;QD=11.14;ReadPosRankSum=-3.241;VQSLOD=2.6786;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:30:38.55:39,0,132	0/0:13,0:14:37.85:0,38,279	0/0:14,0:14:24.49:0,24,154	0/0:17,0:17:5.06:0,5,69	0/0:32,0:34:84.70:0,85,632	0/0:17,0:19:36.42:0,36,253	0/0:13,0:14:34.79:0,35,251	1/1:20,17:37:33.48:439,33,0	0/0:18,0:19:49.83:0,50,377	0/0:36,0:37:85.63:0,86,648	0/0:24,0:26:61.56:0,62,456	0/0:23,0:24:58.77:0,59,445	0/0:27,0:30:53.94:0,54,535	0/0:13,0:14:28.89:0,29,212	1/1:4,27:32:53.76:491,54,0	0/0:29,0:30:67.74:0,68,513	1/1:7,0:21:27.71:135,28,0	1/1:8,20:28:19.60:264,20,0	0/0:12,0:12:26.88:0,27,207	0/0:38,1:41:93.53:0,94,692	0/0:8,0:9:22.95:0,23,168	0/0:26,1:29:11.75:0,12,430	0/0:34,0:34:76.93:0,77,567	0/0:18,0:18:47.78:0,48,365	1/1:6,17:24:31.09:279,31,0	1/1:15,15:31:60.29:595,60,0	1/1:13,33:46:30.42:642,30,0	0/1:9,12:21:18.99:326,0,19
chr10	3636756	.	TA	T	1733.11	PASS	AB=0.877;AC=18;AF=0.321;AN=56;BaseQRankSum=14.036;DP=676;FS=1.144;HRun=3;HaplotypeScore=101.7246;InbreedingCoeff=0.8049;MQ=67.45;MQ0=0;MQRankSum=-2.472;QD=6.88;ReadPosRankSum=-0.953;VQSLOD=0.1812;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:26,1:27:48.03:48,0,64	0/0:14,0:14:36.99:0,37,461	0/0:13,0:12:25.20:0,25,240	0/1:11,4:15:42.21:42,0,151	0/0:35,0:35:91.21:0,91,1130	0/0:17,0:17:45.10:0,45,538	0/0:16,0:16:39.24:0,39,475	1/1:35,1:36:67.47:492,67,0	0/0:19,0:19:55.06:0,55,699	0/0:34,0:34:88.80:0,89,1083	0/0:27,0:27:67.37:0,67,798	0/0:22,0:22:63.01:0,63,802	0/0:31,0:31:77.69:0,78,945	0/0:17,0:17:32.52:0,33,522	1/1:29,0:29:35.44:194,35,0	0/0:29,0:29:81.18:0,81,959	1/1:12,0:12:14.99:75,15,0	1/1:23,0:23:30.31:163,30,0	0/0:15,0:15:42.08:0,42,474	0/0:39,0:39:97.14:0,97,1192	0/0:14,0:14:39.93:0,40,427	0/0:30,0:30:78.16:0,78,926	0/0:35,0:35:88.46:0,88,1053	0/0:17,0:17:45.15:0,45,592	1/1:20,0:20:34.08:194,34,0	1/1:26,0:26:52.28:308,52,0	1/1:43,0:43:50.58:322,51,0	1/1:21,0:21:3.24:99,3,0
chr10	3637454	.	GT	G	2565.92	PASS	AB=1.000;AC=51;AF=0.911;AN=56;BaseQRankSum=0.676;DP=357;FS=2.342;HRun=1;HaplotypeScore=104.9914;InbreedingCoeff=-0.0456;MQ=54.58;MQ0=0;MQRankSum=-2.132;QD=7.19;ReadPosRankSum=4.212;VQSLOD=1.0589;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:20:18.15:116,18,0	1/1:3,0:3:5.36:22,5,0	0/1:13,0:11:8.39:8,0,39	0/1:6,0:6:22.95:23,0,33	1/1:8,1:9:16.69:94,17,0	1/1:17,0:17:21.38:121,21,0	1/1:19,0:19:39.50:157,40,0	1/1:20,0:20:12.28:100,12,0	1/1:15,0:15:39.48:164,39,0	0/1:11,0:11:1.23:86,0,1	1/1:8,1:9:13.91:74,14,0	1/1:13,1:14:21.16:128,21,0	1/1:18,0:18:23.12:150,23,0	1/1:24,0:24:54.34:228,54,0	1/1:20,0:20:8.47:76,8,0	1/1:14,0:14:36.71:146,37,0	1/1:8,0:8:21.16:85,21,0	1/1:10,0:10:16.94:73,17,0	0/1:9,0:9:1.95:51,0,2	1/1:10,1:11:16.05:94,16,0	1/1:14,0:14:26.88:108,27,0	1/1:10,0:10:20.37:83,20,0	1/1:9,0:9:10.28:61,10,0	1/1:9,0:9:12.82:51,13,0	1/1:16,0:16:0.05:91,0,0	1/1:11,0:11:23.53:102,24,0	1/1:12,0:12:30.12:145,30,0	0/1:6,0:6:3.99:32,0,4
chr10	3638870	.	G	GAGAA	3957.63	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=13.134;DP=668;FS=0.000;HRun=0;HaplotypeScore=149.7626;InbreedingCoeff=0.9868;MQ=68.96;MQ0=0;MQRankSum=-2.392;QD=33.54;ReadPosRankSum=0.505;VQSLOD=3.5141;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:32,0:32:87.15:950,87,0	0/0:11,0:11:33.11:0,33,691	0/0:19,0:19:51.17:0,51,1037	0/0:23,0:23:54.48:0,54,1226	0/0:26,0:26:63.64:0,64,1161	0/0:14,0:14:33.11:0,33,679	0/0:33,0:33:96.33:0,96,1982	0/0:21,0:21:63.22:0,63,1295	0/0:24,0:24:63.16:0,63,1193	0/0:23,0:23:69.17:0,69,1345	0/0:16,0:16:44.95:0,45,676	0/0:24,0:24:72.20:0,72,1394	0/0:34,0:34:95.87:0,96,1835	0/0:36,0:36:99:0,105,1953	1/1:33,0:33:13.21:910,13,0	0/0:27,0:27:81.20:0,81,1588	1/1:2,15:17:42.14:1058,42,0	1/1:19,0:19:12.25:551,12,0	0/0:23,0:23:69.15:0,69,1308	0/0:16,0:16:48.15:0,48,959	0/0:51,0:51:99:0,132,2750	0/0:21,0:21:60:0,60,942	0/0:20,0:20:57.19:0,57,1112	0/0:33,0:33:81.19:0,81,1588	1/1:17,0:17:29.99:488,30,0	0/0:33,0:33:99:0,99,2020	0/0:14,0:14:39.13:0,39,816	0/0:8,0:8:24.08:0,24,503
chr10	3638872	.	G	GAAGT	8175.57	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-5.942;DP=689;FS=1.743;HRun=0;HaplotypeScore=140.3260;InbreedingCoeff=0.9994;MQ=67.86;MQ0=0;MQRankSum=-4.139;QD=63.87;ReadPosRankSum=0.400;VQSLOD=6.2488;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,31:39:90.31:2308,90,0	0/0:11,0:11:33.11:0,33,607	0/0:19,0:19:54.18:0,54,970	0/0:23,0:23:65.50:0,65,1125	0/0:25,0:25:66.16:0,66,1141	0/0:13,0:13:36.11:0,36,632	0/0:34,0:34:96.33:0,96,1761	0/0:22,0:22:63.19:0,63,1086	0/0:24,0:24:57.20:0,57,1044	0/0:23,0:23:66.23:0,66,1204	0/0:17,0:17:39.13:0,39,673	0/0:24,0:24:69.24:0,69,1263	0/0:34,0:34:90.10:0,90,1648	0/0:36,0:36:99:0,102,1830	1/1:6,28:34:87.30:2098,87,0	0/0:29,0:29:78.25:0,78,1403	1/1:17,0:17:45.14:1097,45,0	1/1:3,18:21:60.21:1531,60,0	0/0:24,0:24:66.14:0,66,1114	0/0:17,0:17:48.15:0,48,852	0/0:51,0:51:99:0,129,2365	0/0:21,0:21:51.11:0,51,887	0/0:21,0:21:54.18:0,54,989	0/0:35,0:35:90.19:0,90,1521	1/1:1,16:17:48.16:1141,48,0	0/0:34,0:34:99:0,102,1839	0/0:16,0:16:39.13:0,39,717	0/0:8,0:8:24.08:0,24,442
chr10	3640090	.	GTAGA	G	2772.10	PASS	AB=0.829;AC=10;AF=0.179;AN=56;BaseQRankSum=11.472;DP=684;FS=8.695;HRun=0;HaplotypeScore=156.6780;InbreedingCoeff=0.0198;MQ=52.47;MQ0=6;MQRankSum=-9.314;QD=11.65;ReadPosRankSum=-0.883;VQSLOD=2.7505;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:48,2:50:99:132,0,341	0/0:7,0:7:20.81:0,21,441	0/0:17,0:12:35.44:0,35,520	0/0:30,0:17:36.69:0,37,685	0/0:12,0:12:33.03:0,33,713	0/0:17,0:17:19.41:0,19,1086	0/0:36,0:36:99:0,105,2463	0/1:34,0:31:97.50:98,0,437	0/0:34,0:34:99:0,102,2358	0/0:26,0:26:75.23:0,75,1809	0/0:4,0:4:6.02:0,6,151	0/0:28,0:28:81.27:0,81,1957	0/0:27,0:27:81.26:0,81,1910	0/0:23,0:23:66.21:0,66,1615	0/1:32,15:44:99:621,0,365	0/0:25,0:25:57.16:0,57,1265	0/1:12,1:13:28.10:28,0,182	0/1:14,3:17:99:258,0,199	0/0:13,0:13:36.10:0,36,754	0/0:9,0:9:27.08:0,27,589	0/0:83,0:83:99:0,232,5380	0/0:12,0:12:36.09:0,36,708	0/0:10,0:10:27.08:0,27,603	0/0:33,0:33:96.28:0,96,2164	0/1:12,5:16:4.14:147,0,4	0/1:9,28:37:99:1051,0,365	0/1:14,5:19:10.92:522,0,11	1/1:1,3:4:3.01:59,3,0
chr10	3640092	.	AGATT	A	1371.12	PASS	AB=0.943;AC=8;AF=0.143;AN=56;BaseQRankSum=11.015;DP=677;FS=2.125;HRun=0;HaplotypeScore=158.5352;InbreedingCoeff=0.0069;MQ=51.62;MQ0=7;MQRankSum=-7.063;QD=7.10;ReadPosRankSum=-0.173;VQSLOD=2.9186;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:26,28:54:88.51:89,0,436	0/0:7,0:7:17.86:0,18,379	0/0:17,0:12:32.09:0,32,375	0/0:27,1:16:20.62:0,21,519	0/0:13,0:13:6.82:0,7,470	0/0:18,0:18:8.59:0,9,878	0/0:37,0:37:99:0,111,1933	0/0:36,0:32:44.30:0,44,676	0/0:33,0:33:96.32:0,96,2237	0/0:23,0:23:69.24:0,69,1396	0/0:4,0:4:6.02:0,6,102	0/0:27,0:27:79.51:0,80,1799	0/0:28,0:28:84.25:0,84,1789	0/0:23,0:23:66.23:0,66,1437	0/1:46,0:43:99:311,0,465	0/0:20,0:20:59.79:0,60,1152	0/0:13,0:13:2.35:0,2,265	0/1:17,0:17:99:138,0,242	0/0:14,0:14:39.13:0,39,652	0/0:9,0:9:27.08:0,27,453	0/0:79,0:79:99:0,231,4261	0/0:12,0:12:36.11:0,36,639	0/0:10,0:10:27.09:0,27,549	0/0:32,0:32:93.31:0,93,1806	0/1:17,0:16:51.53:102,0,52	0/1:36,0:36:99:554,0,314	0/1:19,0:19:18.34:271,0,18	1/1:4,0:4:3.01:38,3,0
chr10	3640096	.	T	TGGTA	192.86	PASS	AB=1.000;AC=11;AF=0.229;AN=48;BaseQRankSum=4.954;DP=710;FS=3.577;HRun=0;HaplotypeScore=176.0485;InbreedingCoeff=0.2019;MQ=51.31;MQ0=14;MQRankSum=-4.446;QD=0.81;ReadPosRankSum=-0.176;VQSLOD=2.7334;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:54,0:54:19.74:44,0,20	0/0:7,0:7:12.03:0,12,163	./.	./.	1/1:10,4:13:9.03:161,9,0	0/0:19,0:19:1.15:0,1,225	0/0:38,0:38:7.10:0,7,352	1/1:48,0:38:0.89:2,1,0	0/0:32,0:32:60.19:0,60,895	0/0:24,0:24:18.06:0,18,270	./.	0/0:28,0:29:51.17:0,51,760	0/0:29,0:29:42.14:0,42,640	0/0:25,0:25:30.10:0,30,457	0/1:48,0:45:12.81:13,0,199	0/0:22,0:22:33.06:0,33,439	1/1:15,0:15:6.85:46,7,0	0/1:20,0:20:14.49:14,0,54	0/0:16,0:14:6.02:0,6,91	0/0:8,0:8:6.02:0,6,92	0/0:83,0:83:33.25:0,33,792	0/0:13,0:13:18.03:0,18,248	0/0:11,0:11:12.04:0,12,183	0/0:30,0:30:36.12:0,36,546	0/1:19,0:18:14.01:14,0,54	0/0:38,0:38:6.81:0,7,118	0/1:19,0:19:32.11:32,0,109	./.
chr10	3641890	.	A	ATTC	7188.20	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=8.740;DP=784;FS=7.340;HRun=0;HaplotypeScore=137.8895;InbreedingCoeff=0.9786;MQ=92.11;MQ0=0;MQRankSum=-3.383;QD=43.30;ReadPosRankSum=1.952;VQSLOD=6.1866;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,37:52:99:2129,106,0	0/0:16,0:16:45.15:0,45,659	0/0:39,0:39:57.06:0,57,794	0/0:29,0:29:65.93:0,66,914	0/0:28,0:28:75.25:0,75,1104	0/0:17,0:17:42.14:0,42,617	0/0:25,0:25:63.20:0,63,903	0/0:27,0:28:63.17:0,63,886	0/0:16,0:16:36.12:0,36,530	0/0:29,0:29:72.24:0,72,1059	0/0:19,0:19:48.16:0,48,699	0/0:36,0:36:87.28:0,87,1262	0/0:29,0:29:75.25:0,75,1103	0/0:28,0:28:81.27:0,81,1189	1/1:1,25:29:72.25:1485,72,0	0/0:27,0:27:60.20:0,60,884	1/1:5,19:24:48.16:995,48,0	1/1:11,16:27:6.99:951,7,0	0/0:16,0:16:45.13:0,45,624	0/0:26,0:26:66.22:0,66,972	0/0:49,0:49:99:0,120,1767	0/0:31,1:32:22.04:0,22,1093	0/0:22,0:22:54.18:0,54,795	0/0:37,0:37:87.29:0,87,1277	1/1:7,27:34:81.28:1628,81,0	0/0:29,0:29:54.17:0,54,776	0/0:24,0:25:57.13:0,57,777	0/0:16,0:16:45.15:0,45,663
chr10	3642510	.	AC	A	7921.55	PASS	AB=0.529;AC=17;AF=0.304;AN=56;BaseQRankSum=15.435;DP=714;FS=5.415;HRun=4;HaplotypeScore=79.7323;InbreedingCoeff=0.9150;MQ=87.42;MQ0=0;MQRankSum=-8.049;QD=31.81;ReadPosRankSum=1.745;VQSLOD=5.4994;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,41:44:99:1330,111,0	0/0:9,0:9:27.09:0,27,378	0/0:28,0:28:71.73:0,72,970	0/0:22,0:22:60.20:0,60,838	0/0:21,0:21:63.21:0,63,880	0/0:20,0:20:60.20:0,60,839	0/0:26,0:26:78.26:0,78,1089	1/1:5,32:37:96.28:1140,96,0	0/0:23,0:23:66.22:0,66,924	0/0:30,0:30:87.28:0,87,1202	0/0:19,0:19:54.14:0,54,720	0/0:35,0:35:99:0,105,1454	0/0:29,0:29:84.25:0,84,1155	0/0:30,0:30:87.28:0,87,1202	1/1:1,31:32:93.28:1116,93,0	0/0:24,0:24:72.23:0,72,989	1/1:1,29:30:87.27:1044,87,0	1/1:1,16:17:45.14:540,45,0	0/0:20,0:20:57.19:0,57,797	0/0:20,0:20:57.18:0,57,779	0/0:48,0:48:99:0,141,1963	0/0:20,0:20:60.20:0,60,839	0/0:13,0:13:39.01:0,39,503	0/0:28,0:28:81.20:0,81,1076	1/1:0,26:26:75.23:900,75,0	0/1:4,33:37:23.78:988,0,24	1/1:1,18:19:51.16:612,51,0	1/1:0,7:7:21.06:252,21,0
chr10	3643330	.	CAACCTCCATCACAGGGAAGAGA	C	8723.67	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=11.446;DP=773;FS=3.443;HRun=0;HaplotypeScore=426.5304;InbreedingCoeff=0.9985;MQ=88.39;MQ0=0;MQRankSum=-11.394;QD=134.21;ReadPosRankSum=3.939;VQSLOD=4.1112;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:81.28:0,81,7965	0/0:12,0:12:36.12:0,36,3366	0/0:20,0:20:57.20:0,57,3498	0/0:38,0:38:99:0,108,7271	0/0:22,0:22:66.23:0,66,6524	0/0:26,0:26:72.25:0,72,6894	0/0:23,0:23:69.24:0,69,6124	0/0:24,0:24:69.24:0,69,6128	0/0:32,0:32:96.31:0,96,8635	0/0:32,0:32:96.32:0,96,9059	0/0:21,0:21:60.20:0,60,5099	0/0:39,0:39:99:0,117,11213	0/0:29,0:29:84.29:0,84,8192	0/0:35,0:35:99:0,105,9485	1/1:7,21:28:54.19:3341,54,0	0/0:37,0:37:99:0,105,9671	0/0:28,0:28:84.29:0,84,7843	1/1:3,8:11:21.07:1300,21,0	0/0:33,0:33:89.86:0,90,6678	0/0:32,0:32:96.31:0,96,8528	0/0:32,0:32:96.33:0,96,9464	0/0:24,0:24:72.25:0,72,7005	0/0:20,0:20:60.20:0,60,5046	0/0:26,0:26:78.27:0,78,7467	1/1:3,23:26:66.23:4083,66,0	0/0:36,0:36:99:0,105,8860	0/0:44,0:44:99:0,129,11025	0/0:14,0:14:39.13:0,39,3539
chr10	3647722	.	CCT	C	205.56	PASS	AB=1.000;AC=14;AF=0.259;AN=54;BaseQRankSum=0.747;DP=712;FS=15.222;HRun=0;HaplotypeScore=113.9680;InbreedingCoeff=-0.1252;MQ=49.08;MQ0=38;MQRankSum=2.654;QD=0.71;ReadPosRankSum=1.600;VQSLOD=1.4866;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:31,0:28:10.43:10,0,32	0/1:12,0:12:21.78:22,0,67	./.	0/0:62,0:16:0:0,0,0	0/0:33,0:32:2.75:0,3,66	0/0:27,0:27:7.63:0,8,145	0/1:24,0:22:6.29:6,0,67	0/0:29,0:28:12.27:0,12,64	0/1:24,0:22:43.71:44,0,109	0/1:16,0:16:38.01:38,0,135	0/0:8,4:10:4.30:0,4,15	0/1:25,0:24:31.60:32,0,52	0/0:20,5:25:11.13:0,11,68	0/1:25,0:24:11.76:12,0,119	0/0:22,0:21:2.84:0,3,25	0/0:32,0:31:17.23:0,17,310	0/0:15,0:13:8.47:0,8,56	0/0:22,0:22:8.16:0,8,47	1/1:13,0:12:4.74:35,5,0	0/0:18,0:18:5.74:0,6,53	0/1:43,0:39:38.76:39,0,58	0/1:21,0:19:15.47:15,0,38	1/1:9,0:9:2.91:18,3,0	0/1:48,0:44:76.01:76,0,191	0/0:23,0:22:3.22:0,3,26	0/0:37,0:35:18.58:0,19,138	0/0:20,0:19:9.99:0,10,56	0/0:8,0:7:8.99:0,9,56
chr10	3647758	.	TCACACACACA	T	298.90	PASS	AB=0.708;AC=5;AF=0.096;AN=52;BaseQRankSum=4.171;DP=612;FS=10.662;HRun=0;HaplotypeScore=186.6651;InbreedingCoeff=0.6210;MQ=45.52;MQ0=29;MQRankSum=-3.542;QD=4.15;ReadPosRankSum=0.349;VQSLOD=2.0756;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:20,14:29:33.32:79,0,33	0/0:12,0:12:21.53:0,22,789	./.	./.	0/0:28,0:28:36.10:0,36,1063	0/0:29,0:28:42.09:0,42,1347	0/0:32,0:32:24.55:0,25,927	0/0:29,0:26:61.73:0,62,1424	0/0:24,0:23:32.97:0,33,1057	0/0:35,0:35:93.24:0,93,3062	0/0:16,0:14:15.03:0,15,446	0/0:27,0:25:49.69:0,50,1721	0/0:19,0:17:26.01:0,26,773	0/0:29,0:28:54.15:0,54,1809	1/1:21,0:21:8.79:201,9,0	0/0:23,0:22:36.21:0,36,1087	0/0:19,0:18:35.95:0,36,318	1/1:17,0:17:6.18:132,6,0	0/0:9,0:8:12.01:0,12,374	0/0:12,0:12:11.44:0,11,416	0/0:41,0:36:39.08:0,39,1419	0/0:27,0:26:41.51:0,42,1603	0/0:8,0:8:12.04:0,12,389	0/0:45,0:42:52.04:0,52,1913	0/0:17,0:16:5.99:0,6,50	0/0:31,0:30:68.89:0,69,2277	0/0:14,0:14:20.96:0,21,660	0/0:14,0:11:24.08:0,24,957
chr10	3647777	.	CACACACACACACAT	C	511.57	PASS	AB=0.594;AC=5;AF=0.089;AN=56;BaseQRankSum=4.836;DP=681;FS=2.969;HRun=0;HaplotypeScore=224.1400;InbreedingCoeff=0.7284;MQ=48.83;MQ0=25;MQRankSum=-3.964;QD=8.67;ReadPosRankSum=0.123;VQSLOD=2.7418;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:32:7.26:0,7,291	0/0:14,0:14:27.09:0,27,1403	0/0:15,0:4:11.93:0,12,223	0/0:15,0:4:12.04:0,12,264	0/0:27,0:27:45.12:0,45,2014	0/0:30,0:29:39.80:0,40,2587	0/0:28,0:28:34.53:0,35,1745	0/0:37,0:35:96.56:0,97,3158	0/0:28,0:28:63.66:0,64,2710	0/0:46,0:46:99:0,117,5257	0/0:16,0:16:26.99:0,27,950	0/0:26,0:25:54.16:0,54,2794	0/0:21,0:19:39.09:0,39,1461	0/0:30,0:29:60.17:0,60,2960	1/1:7,14:21:11.97:371,12,0	0/0:27,0:26:62.64:0,63,2181	0/0:23,0:22:21.15:0,21,1219	0/1:6,13:19:1.85:233,0,2	0/0:12,0:11:27.48:0,27,890	0/0:16,0:16:32.36:0,32,1112	0/0:37,0:33:48.09:0,48,2481	0/0:29,0:28:56.16:0,56,3101	0/0:13,0:13:33.08:0,33,1391	0/0:39,0:37:63.20:0,63,3216	1/1:12,7:18:2.87:19,3,0	0/0:27,0:27:77.79:0,78,3425	0/0:16,0:16:27.09:0,27,1153	0/0:14,0:12:27.09:0,27,1449
chr10	3647789	.	CAT	C	39.81	PASS	AB=1.000;AC=8;AF=0.143;AN=56;BaseQRankSum=6.773;DP=693;FS=15.467;HRun=0;HaplotypeScore=112.5037;InbreedingCoeff=0.6487;MQ=53.54;MQ0=19;MQRankSum=-6.245;QD=0.36;ReadPosRankSum=-2.478;VQSLOD=0.2405;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:33:24.22:0,24,195	0/0:13,0:13:27.04:0,27,354	0/0:23,0:9:23.82:0,24,213	0/0:24,0:12:16.34:0,16,143	0/0:22,5:27:40.36:0,40,449	0/0:35,0:35:44.72:0,45,734	0/0:28,0:28:28.72:0,29,454	0/1:39,0:37:1.19:1,0,578	0/0:29,0:29:62.18:0,62,763	0/0:43,0:43:70.09:0,70,1101	0/0:14,0:14:21.67:0,22,255	0/0:25,0:25:62.81:0,63,758	0/0:19,0:17:10.06:0,10,371	0/0:31,0:30:50.32:0,50,724	1/1:17,0:17:11.84:79,12,0	0/0:28,0:28:43.43:0,43,675	0/1:25,0:24:13.62:14,0,185	1/1:16,0:16:8.84:55,9,0	0/0:15,0:15:42.73:0,43,393	0/0:17,0:17:38.51:0,39,361	0/0:35,0:32:37.63:0,38,643	0/0:30,0:30:63.46:0,63,775	0/0:16,0:16:37.30:0,37,320	0/0:32,0:31:20.01:0,20,612	1/1:13,0:13:2.96:19,3,0	0/0:30,0:30:35.35:0,35,820	0/0:17,0:17:23.05:0,23,383	0/0:15,0:13:20.06:0,20,321
chr10	3649411	.	TGATAGATAGATAGATA	T	2974.12	PASS	AB=0.611;AC=7;AF=0.135;AN=52;BaseQRankSum=3.930;DP=473;FS=0.000;HRun=0;HaplotypeScore=191.3016;InbreedingCoeff=0.7929;MQ=62.66;MQ0=3;MQRankSum=-6.086;QD=38.13;ReadPosRankSum=1.302;VQSLOD=2.3724;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,2:17:7.20:766,7,0	0/0:1,0:5:8.94:0,9,387	./.	./.	0/0:13,0:28:60.16:0,60,2143	0/0:9,0:20:27.09:0,27,1316	0/0:12,0:12:9.03:0,9,247	0/0:23,0:21:6.01:0,6,111	0/0:14,0:14:36.12:0,36,2449	0/0:19,0:19:54.19:0,54,3581	0/0:32,0:32:69.19:0,69,3158	0/0:14,0:14:33.11:0,33,1686	0/0:23,0:23:45.14:0,45,2771	0/0:11,0:11:27.07:0,27,1269	1/1:5,12:17:15.05:655,15,0	0/0:14,0:15:24.07:0,24,1129	0/0:13,0:24:36.12:0,36,2084	0/1:8,14:21:2.95:510,0,3	0/0:14,0:14:16.60:0,17,810	0/0:18,0:18:33.11:0,33,2279	0/0:4,0:10:18.06:0,18,1044	0/0:6,0:12:18.06:0,18,719	0/0:28,0:28:57.16:0,57,3028	0/0:12,0:13:27.08:0,27,1359	1/1:3,19:22:27.09:1181,27,0	0/0:6,0:13:27.08:0,27,1011	0/0:21,0:21:45.15:0,45,3154	0/0:12,0:12:24.07:0,24,1601
chr10	3649562	.	AT	A	608.89	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.447;DP=450;FS=5.344;HRun=7;HaplotypeScore=41.0845;InbreedingCoeff=0.8674;MQ=72.86;MQ0=0;MQRankSum=-0.585;QD=26.47;ReadPosRankSum=1.115;VQSLOD=4.0592;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,23:23:69.16:704,69,0	0/0:6,0:6:18.06:0,18,226	0/0:8,0:8:21:0,21,241	0/0:6,0:6:14.96:0,15,168	0/0:26,0:26:72.22:0,72,889	0/0:16,0:16:48.15:0,48,604	0/0:6,0:6:15.05:0,15,189	0/0:25,0:25:60.19:0,60,753	0/0:12,0:12:36.12:0,36,453	0/0:13,0:13:30.10:0,30,377	0/0:31,0:31:84.26:0,84,1046	0/0:12,0:12:36.12:0,36,453	0/0:19,0:19:48.15:0,48,604	0/0:9,0:9:27.09:0,27,340	0/0:20,0:20:60.19:0,60,755	0/0:18,0:18:51.16:0,51,642	0/0:24,0:24:63.20:0,63,789	0/0:21,0:21:60.15:0,60,733	0/0:13,0:13:36.10:0,36,430	0/0:25,0:25:75.24:0,75,943	0/0:10,0:10:30.10:0,30,376	0/0:12,0:12:36.12:0,36,453	0/0:17,0:17:51.16:0,51,640	0/0:3,0:3:6.02:0,6,75	0/0:21,0:21:60.19:0,60,754	0/0:21,0:21:54.17:0,54,678	0/0:24,0:24:72.23:0,72,906	0/0:9,0:9:26.98:0,27,279
chr10	3650001	.	C	CAAGG	8148.82	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-1.610;DP=783;FS=10.916;HRun=0;HaplotypeScore=123.1741;InbreedingCoeff=0.9998;MQ=82.20;MQ0=0;MQRankSum=-3.999;QD=60.81;ReadPosRankSum=1.551;VQSLOD=6.7263;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,48:57:99:3562,144,0	0/0:10,0:10:30.10:0,30,560	0/0:29,0:29:72.22:0,72,1243	0/0:17,0:17:51.15:0,51,863	0/0:34,0:34:99:0,99,1811	0/0:24,0:24:66.19:0,66,1167	0/0:20,0:20:51.17:0,51,952	0/0:31,0:31:81.26:0,81,1447	0/0:31,0:31:90.31:0,90,1679	0/0:21,0:21:51.17:0,51,941	0/0:29,0:29:76.78:0,77,1524	0/0:35,0:35:99:0,99,1815	0/0:36,0:36:99:0,99,1841	0/0:25,0:25:69.24:0,69,1288	1/1:3,32:35:90.09:2074,90,0	0/0:33,0:33:93.29:0,93,1665	0/0:30,0:30:87.30:0,87,1622	1/1:3,13:16:39.13:1018,39,0	0/0:19,0:19:57.18:0,57,1005	0/0:31,0:31:87.30:0,87,1624	0/0:42,0:42:99:0,114,2065	0/0:24,0:24:69.19:0,69,1194	0/0:19,0:19:54.19:0,54,1008	0/0:43,0:43:99:0,114,2119	1/1:1,23:26:63.13:1495,63,0	0/0:29,0:29:84.29:0,84,1559	0/0:24,0:24:66.21:0,66,1201	0/0:13,0:13:36.12:0,36,672
chr10	3652105	.	TAC	T	562.98	PASS	AB=0.974;AC=21;AF=0.404;AN=52;BaseQRankSum=1.645;DP=493;FS=13.383;HRun=0;HaplotypeScore=60.6928;InbreedingCoeff=0.0291;MQ=59.55;MQ0=8;MQRankSum=0.299;QD=1.89;ReadPosRankSum=1.635;VQSLOD=-0.2131;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:22:9.37:55,0,9	0/0:6,0:6:10.26:0,10,115	./.	./.	0/1:16,1:18:22.86:23,0,217	0/1:13,0:13:1.43:1,0,104	0/1:15,1:16:6.05:6,0,273	0/0:20,0:20:18.69:0,19,140	0/1:16,1:16:22.69:23,0,209	0/1:15,0:15:4.64:5,0,124	0/1:16,0:16:12.46:12,0,152	0/1:15,0:16:5.47:5,0,153	0/1:12,0:12:21.25:21,0,194	0/1:9,0:9:0.67:1,0,213	0/0:14,0:18:11.99:0,12,101	0/0:13,0:13:29.20:0,29,332	1/1:22,0:21:2.99:25,3,0	0/0:14,0:18:14.22:0,14,127	0/1:14,0:14:4.86:5,0,211	0/1:19,3:22:2.68:3,0,286	0/1:22,0:21:47.26:47,0,172	0/0:21,0:21:15.49:0,15,184	0/0:22,0:22:19.87:0,20,244	0/0:17,0:17:26.55:0,27,473	0/0:17,0:17:24.02:0,24,243	1/1:14,0:14:11.99:102,12,0	1/1:20,14:33:6.15:271,6,0	1/1:8,7:16:11.87:112,12,0
chr10	3653395	.	TGATA	T	1628.50	PASS	AB=0.939;AC=13;AF=0.260;AN=50;BaseQRankSum=4.790;DP=600;FS=3.146;HRun=0;HaplotypeScore=119.1561;InbreedingCoeff=0.5725;MQ=69.59;MQ0=8;MQRankSum=-1.809;QD=8.27;ReadPosRankSum=0.566;VQSLOD=2.9576;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:30.09:0,30,642	0/0:6,0:9:5.82:0,6,101	./.	./.	0/1:37,1:38:2.96:3,0,792	0/0:8,0:15:15.05:0,15,260	0/0:13,0:13:9.03:0,9,197	./.	0/0:18,0:25:15.05:0,15,271	0/1:22,5:27:99:102,0,517	1/1:10,4:14:9.03:135,9,0	0/0:18,0:18:27.09:0,27,571	0/0:21,0:21:15.05:0,15,342	0/0:19,0:19:24.08:0,24,534	1/1:12,10:23:30.10:450,30,0	1/1:18,8:26:24.08:356,24,0	1/1:22,0:23:6.35:44,6,0	0/0:13,0:13:12:0,12,210	0/0:12,0:12:6.02:0,6,137	0/0:28,0:28:30.10:0,30,691	0/0:18,0:19:3.01:0,3,52	0/0:13,0:17:12.04:0,12,207	0/0:16,0:16:27.09:0,27,615	0/1:25,0:25:27.04:27,0,328	1/1:6,14:21:45.15:676,45,0	0/0:25,0:25:45.15:0,45,770	0/0:23,0:23:30.09:0,30,431	0/0:18,0:18:6.02:0,6,90
chr10	3653461	.	TA	T	5759.69	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=12.660;DP=587;FS=12.634;HRun=7;HaplotypeScore=77.1951;InbreedingCoeff=0.9918;MQ=60.83;MQ0=2;MQRankSum=-1.742;QD=26.06;ReadPosRankSum=1.113;VQSLOD=4.5935;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,21:23:57.13:581,57,0	0/0:8,0:8:15.04:0,15,189	0/0:9,0:7:21.06:0,21,253	0/0:5,0:4:12.04:0,12,151	0/0:27,0:27:75.23:0,75,931	0/0:22,0:21:54.14:0,54,662	0/0:17,0:17:51.16:0,51,642	1/1:2,28:30:84.18:850,84,0	0/0:24,0:24:60.15:0,60,737	0/0:37,0:37:99:0,99,1246	0/0:12,0:12:27.04:0,27,322	0/0:19,0:19:54.17:0,54,668	0/0:20,0:20:60.19:0,60,753	0/0:26,0:26:72.22:0,72,891	1/1:1,24:25:57.12:581,57,0	0/0:19,0:18:54.17:0,54,679	1/1:1,15:16:42.09:428,42,0	1/1:2,11:13:33.07:337,33,0	0/0:11,0:11:33.10:0,33,404	0/0:32,0:32:84.26:0,84,1044	0/0:14,0:14:36.12:0,36,453	0/0:23,0:23:60.15:0,60,732	0/0:26,0:26:78.24:0,78,968	0/0:15,0:15:42.13:0,42,528	1/1:5,35:40:90.19:918,90,0	1/1:3,14:17:42.10:429,42,0	1/1:1,33:34:96.22:979,96,0	1/1:1,22:23:52.48:657,52,0
chr10	3653929	.	T	TA	1314.86	PASS	AB=0.576;AC=5;AF=0.089;AN=56;BaseQRankSum=-8.069;DP=686;FS=2.546;HRun=10;HaplotypeScore=66.9930;InbreedingCoeff=0.7137;MQ=65.13;MQ0=0;MQRankSum=-0.794;QD=18.01;ReadPosRankSum=1.633;VQSLOD=4.5001;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:80.88:0,81,665	0/0:15,0:16:40.99:0,41,326	0/0:18,0:17:19.37:0,19,174	0/0:15,0:15:17.76:0,18,122	0/0:20,0:22:51.99:0,52,406	0/0:18,0:18:41.06:0,41,343	0/0:27,0:27:62.88:0,63,510	0/0:32,0:33:70.92:0,71,570	0/0:19,0:19:50.92:0,51,419	0/0:32,0:32:74.89:0,75,616	0/0:21,0:21:53.92:0,54,443	0/0:27,0:29:64.92:0,65,523	0/0:29,0:30:85.88:0,86,685	0/0:20,0:20:53.92:0,54,443	1/1:6,30:36:56.56:807,57,0	0/0:22,0:22:56.89:0,57,465	0/0:19,0:19:53.93:0,54,443	0/1:5,14:19:47.45:365,0,47	0/0:14,0:14:29.94:0,30,243	0/0:26,0:26:65.89:0,66,542	0/0:27,0:27:68.92:0,69,567	0/0:34,0:34:95.84:0,96,784	0/0:23,0:23:62.91:0,63,517	0/0:27,1:28:33.92:0,34,482	1/1:4,14:18:5.43:263,5,0	0/0:31,0:32:76.90:0,77,622	0/0:35,0:36:99:0,104,832	0/0:17,1:19:21.02:0,21,368
chr10	3655338	.	CT	C	748.56	PASS	AB=0.880;AC=18;AF=0.321;AN=56;BaseQRankSum=6.257;DP=532;FS=8.922;HRun=13;HaplotypeScore=70.2987;InbreedingCoeff=0.1296;MQ=71.34;MQ0=0;MQRankSum=0.708;QD=2.91;ReadPosRankSum=3.263;VQSLOD=-0.7290;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:2,0:27:33.96:99,34,0	0/1:5,1:8:4.13:4,0,97	0/1:21,2:19:16.52:17,0,97	0/0:11,0:8:5.60:0,6,39	0/1:21,3:26:9.69:10,0,410	0/1:13,3:18:27:27,0,218	0/1:7,2:9:0.89:1,0,148	0/0:30,1:32:31.99:0,32,447	0/0:13,0:13:29.95:0,30,265	0/1:15,2:18:11.61:12,0,248	0/1:14,1:17:8.11:8,0,214	0/0:16,0:16:18.03:0,18,175	0/0:19,1:20:14.26:0,14,284	0/0:17,0:17:23.18:0,23,364	1/1:6,18:26:48.76:340,49,0	0/0:12,1:15:13.82:0,14,269	0/0:6,0:31:48.79:0,49,286	1/1:9,11:21:2.66:174,3,0	0/0:26,1:30:14.59:0,15,410	0/1:18,4:22:36.56:37,0,324	0/1:7,1:8:9.89:10,0,71	0/0:10,1:12:4.91:0,5,182	0/0:9,3:13:10.93:0,11,236	0/0:21,1:24:28.85:0,29,415	1/1:2,10:13:0.65:168,1,0	0/1:18,2:20:4.77:5,0,278	0/0:24,0:24:42.04:0,42,398	0/0:16,1:17:14.06:0,14,280
chr10	3655521	.	G	GA	397.53	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-3.054;DP=474;FS=2.526;HRun=4;HaplotypeScore=44.7320;InbreedingCoeff=0.9662;MQ=69.80;MQ0=0;MQRankSum=-2.642;QD=24.85;ReadPosRankSum=0.880;VQSLOD=2.2895;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,14:16:36.12:492,36,0	0/0:15,0:15:42.09:0,42,464	0/0:10,0:9:21.05:0,21,226	0/0:8,0:7:18.05:0,18,203	0/0:21,0:21:57.16:0,57,647	0/0:31,0:31:93.25:0,93,1045	0/0:17,0:17:48.14:0,48,545	0/0:29,0:29:78.21:0,78,877	0/0:16,0:16:45.13:0,45,510	0/0:15,0:15:39.11:0,39,443	0/0:18,0:18:54.14:0,54,603	0/0:21,0:21:60.17:0,60,680	0/0:19,0:19:54.14:0,54,602	0/0:13,0:13:39.11:0,39,442	0/0:18,0:18:54.14:0,54,602	0/0:12,0:12:30.08:0,30,340	0/0:16,0:16:42.12:0,42,476	0/0:14,0:14:39.09:0,39,431	0/0:26,0:26:66.19:0,66,748	0/0:21,0:21:63.18:0,63,715	0/0:10,0:10:27.08:0,27,306	0/0:5,0:5:15.03:0,15,160	0/0:15,0:15:45.13:0,45,510	0/0:9,0:9:27.08:0,27,306	0/0:31,0:31:93.27:0,93,1055	0/0:12,0:11:21.06:0,21,238	0/0:22,0:22:66.19:0,66,749	0/0:14,0:14:42.10:0,42,465
chr10	3656298	.	GTCTCCCTCTCTCTCTTTCTCTCCATCCCTTTC	G	4767.86	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=8.085;DP=731;FS=3.838;HRun=0;HaplotypeScore=507.8735;InbreedingCoeff=0.7633;MQ=67.45;MQ0=2;MQRankSum=-7.496;QD=45.84;ReadPosRankSum=3.095;VQSLOD=1.4251;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:7,26:32:13.04:1479,13,0	0/0:14,0:14:39.12:0,39,3582	0/0:44,0:40:93.21:0,93,4344	0/0:47,0:40:98.84:0,99,4833	0/0:21,0:21:63.22:0,63,6951	0/0:32,0:32:87.29:0,87,8948	0/0:19,0:19:51.18:0,51,3550	0/0:25,0:25:66.22:0,66,4180	0/0:27,0:27:75.26:0,75,7961	0/0:33,0:33:93.31:0,93,9074	0/0:27,0:27:75.24:0,75,6419	0/0:25,0:25:69.24:0,69,8106	0/0:41,0:41:99:0,108,11014	0/0:14,0:14:42.14:0,42,4516	1/1:26,0:26:30.10:2100,30,0	0/0:21,0:21:57.20:0,57,6388	0/0:15,0:15:33.11:0,33,4407	1/1:13,0:13:3.01:218,3,0	0/0:20,0:20:57.16:0,57,3769	0/0:18,0:18:48.16:0,48,4595	0/0:37,0:37:99:0,99,10268	0/0:29,0:29:84.29:0,84,8418	0/0:20,0:20:54.19:0,54,6177	0/0:21,0:21:54.19:0,54,5674	0/1:32,0:32:30.37:970,0,30	0/0:34,0:33:81.27:0,81,8896	0/0:23,0:21:69.24:0,69,6654	0/0:18,0:18:54.19:0,54,6971
chr10	3656304	.	CTCTCTCTCTTTCTCTCCATCCCTTTCTCTCCCTGT	C	5135.02	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=8.448;DP=742;FS=0.749;HRun=0;HaplotypeScore=553.9075;InbreedingCoeff=0.9353;MQ=68.76;MQ0=2;MQRankSum=-7.016;QD=50.34;ReadPosRankSum=3.543;VQSLOD=1.2246;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:27:12.05:983,12,0	0/0:14,0:14:39.11:0,39,3524	0/0:43,0:38:62.32:0,62,3616	0/0:56,0:47:94.36:0,94,4518	0/0:25,0:25:75.22:0,75,7951	0/0:33,0:33:99:0,99,9340	0/0:18,0:18:51.13:0,51,3290	0/0:26,0:26:63.20:0,63,3902	0/0:25,0:25:75.23:0,75,7905	0/0:35,0:35:99:0,102,9580	0/0:26,0:26:66.21:0,66,5741	0/0:23,0:23:69.22:0,69,7771	0/0:38,0:38:99:0,109,10810	0/0:14,0:14:42.13:0,42,4454	1/1:2,25:27:30.10:2628,30,0	0/0:22,0:22:63.21:0,63,7230	0/0:14,0:14:39.13:0,39,5156	1/1:0,13:13:3.01:271,3,0	0/0:21,0:21:54.18:0,54,3411	0/0:20,0:20:54.16:0,54,5262	0/0:35,0:35:99:0,102,10301	0/0:32,0:32:87.24:0,87,9163	0/0:20,0:20:54.17:0,54,5836	0/0:20,0:20:57.16:0,57,5997	1/1:1,33:34:15.05:1252,15,0	0/0:32,0:31:84.22:0,84,9381	0/0:28,0:26:81.21:0,81,8084	0/0:18,0:18:54.19:0,54,6813
chr10	3660402	.	A	AGCT	3083.74	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=10.459;DP=627;FS=9.873;HRun=0;HaplotypeScore=98.0832;InbreedingCoeff=1.0000;MQ=82.75;MQ0=0;MQRankSum=-10.250;QD=57.11;ReadPosRankSum=1.254;VQSLOD=5.6217;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,138,2375	0/0:16,0:16:48.15:0,48,818	0/0:24,0:24:61.07:0,61,900	0/0:18,0:18:51.11:0,51,764	0/0:21,0:21:63.20:0,63,1080	0/0:23,0:23:66.23:0,66,1164	0/0:34,0:34:99:0,99,1713	0/0:25,0:25:69.23:0,69,1189	0/0:19,0:19:57.20:0,57,996	0/0:24,0:24:69.22:0,69,1166	0/0:18,0:18:54.19:0,54,951	0/0:20,0:20:60.20:0,60,1027	0/0:20,0:20:60.14:0,60,939	0/0:21,0:21:63.19:0,63,1055	1/1:4,14:18:54.18:1155,54,0	0/0:14,0:13:42.14:0,42,741	0/0:21,0:21:60.21:0,60,1049	1/1:3,14:17:42.14:943,42,0	0/0:21,0:21:57.18:0,57,977	0/0:16,0:16:48.12:0,48,759	0/0:28,0:28:75.23:0,75,1263	0/0:16,0:16:42.14:0,42,737	0/0:17,0:17:51.15:0,51,843	0/0:33,0:32:99:0,99,1741	1/1:4,15:19:54.17:1129,54,0	0/0:30,0:30:90.31:0,90,1584	0/0:29,0:29:84.29:0,84,1481	0/0:19,0:19:54.19:0,54,952
chr10	3660406	.	T	TG	1818.85	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=11.255;DP=626;FS=13.103;HRun=0;HaplotypeScore=75.1280;InbreedingCoeff=1.0000;MQ=83.94;MQ0=0;MQRankSum=-10.652;QD=35.66;ReadPosRankSum=1.178;VQSLOD=2.2772;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,135,1887	0/0:16,0:16:48.13:0,48,623	0/0:24,0:24:72.20:0,72,896	0/0:18,0:18:47.32:0,47,583	0/0:21,0:21:63.20:0,63,864	0/0:24,0:24:72.23:0,72,990	0/0:36,0:36:99:0,108,1456	0/0:25,0:25:72.22:0,72,962	0/0:21,0:21:60.18:0,60,808	0/0:24,0:24:72.24:0,72,1007	0/0:21,0:21:60.18:0,60,795	0/0:18,0:18:54.18:0,54,755	0/0:18,0:18:54.17:0,54,740	0/0:21,0:21:63.20:0,63,866	1/1:1,14:15:45.11:593,45,0	0/0:14,0:13:42.14:0,42,587	0/0:20,0:20:57.16:0,57,762	1/1:0,17:17:48.16:682,48,0	0/0:21,0:21:63.20:0,63,860	0/0:17,0:17:51.15:0,51,682	0/0:25,0:25:72.24:0,72,1005	0/0:18,0:18:50.76:0,51,641	0/0:17,0:17:51.15:0,51,694	0/0:33,0:32:99:0,99,1382	1/1:1,18:19:51.14:687,51,0	0/0:29,0:29:87.29:0,87,1215	0/0:29,0:29:87.27:0,87,1183	0/0:19,0:19:54.18:0,54,752
chr10	3661965	.	GTGATCCACAAAA	G	8938.16	PASS	AB=0.608;AC=9;AF=0.161;AN=56;BaseQRankSum=15.720;DP=591;FS=2.273;HRun=0;HaplotypeScore=249.9730;InbreedingCoeff=-0.1847;MQ=85.27;MQ0=0;MQRankSum=-14.384;QD=58.04;ReadPosRankSum=4.820;VQSLOD=4.5154;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:11,15:26:99:1290,0,113	0/0:12,0:12:36.12:0,36,2163	0/0:22,0:22:66.22:0,66,3144	0/0:22,0:22:61.45:0,61,2642	0/0:14,0:14:42.14:0,42,2439	0/0:33,0:33:99:0,99,5809	0/0:25,0:25:75.21:0,75,4185	0/1:9,7:16:99:580,0,457	0/0:29,0:29:87.30:0,87,5327	0/0:26,0:26:75.26:0,75,4275	0/0:10,0:10:27.09:0,27,1564	0/0:27,0:27:81.24:0,81,4479	0/0:19,0:19:57.20:0,57,3324	0/0:24,0:24:72.25:0,72,4413	0/1:3,14:17:64.72:1265,0,65	0/0:22,0:22:66.21:0,66,3792	0/1:12,11:23:99:1023,0,187	0/1:7,5:12:99:490,0,178	0/0:20,0:20:60.21:0,60,3620	0/0:21,0:21:63.19:0,63,3616	0/0:38,0:38:99:0,114,6584	0/0:21,0:21:63.22:0,63,3777	0/0:20,0:20:57.16:0,57,3017	0/0:32,0:32:96.33:0,96,5730	0/1:3,19:22:24.30:1688,0,24	0/1:3,12:15:16.07:1100,0,16	0/1:3,11:14:99:872,0,111	0/1:2,7:9:31.89:631,0,32
chr10	3661980	.	AGGAGCT	A	5273.35	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=15.693;DP=530;FS=3.533;HRun=0;HaplotypeScore=173.9416;InbreedingCoeff=0.9954;MQ=87.26;MQ0=0;MQRankSum=-14.873;QD=50.22;ReadPosRankSum=4.399;VQSLOD=4.8817;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,15:15:45.15:739,45,0	0/0:11,0:11:33.11:0,33,1228	0/0:22,0:22:66.14:0,66,2133	0/0:22,0:22:57.07:0,57,2039	0/0:13,0:13:39.12:0,39,1299	0/0:30,0:30:90.31:0,90,3363	0/0:24,0:24:72.25:0,72,2694	1/1:0,10:10:30.10:487,30,0	0/0:30,0:30:90.31:0,90,3366	0/0:25,0:25:72.25:0,72,2702	0/0:7,0:7:18.06:0,18,614	0/0:22,0:22:66.23:0,66,2471	0/0:20,0:20:60.21:0,60,2244	0/0:24,0:24:72.23:0,72,2621	1/1:0,14:14:42.14:713,42,0	0/0:18,0:18:54.19:0,54,2013	1/1:0,11:11:33.11:566,33,0	1/1:0,5:5:15.05:262,15,0	0/0:21,0:21:63.22:0,63,2272	0/0:26,0:26:78.27:0,78,2900	0/0:35,0:35:99:0,105,3886	0/0:24,0:24:69.24:0,69,2471	0/0:20,0:20:57.20:0,57,2019	0/0:31,0:31:93.27:0,93,3298	1/1:0,19:19:57.19:972,57,0	1/1:0,12:12:36.12:625,36,0	1/1:1,11:12:33.11:543,33,0	1/1:0,7:7:21.07:367,21,0
chr10	3662017	.	C	CT	1014.19	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.479;DP=654;FS=0.738;HRun=2;HaplotypeScore=139.0977;InbreedingCoeff=0.9830;MQ=81.51;MQ0=0;MQRankSum=-5.657;QD=29.83;ReadPosRankSum=-1.177;VQSLOD=2.9656;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:45.06:0,45,523	0/0:10,0:10:27.06:0,27,319	0/0:24,0:24:63.14:0,63,699	0/0:19,0:20:43.56:0,44,462	0/0:28,0:28:75.23:0,75,927	0/0:19,0:19:54.15:0,54,656	0/0:27,0:27:69.19:0,69,830	0/0:19,0:19:51.08:0,51,597	0/0:32,0:32:93.29:0,93,1152	0/0:30,0:30:75.23:0,75,920	0/0:7,0:7:15.05:0,15,186	0/0:22,0:22:60.19:0,60,744	0/0:23,0:23:60.17:0,60,729	0/0:27,0:27:75.18:0,75,878	0/0:21,0:21:63.14:0,63,762	0/0:22,0:22:63.19:0,63,770	1/1:3,31:34:81.19:1109,81,0	0/0:16,0:16:33.10:0,33,409	0/0:26,0:26:69.16:0,69,788	0/0:26,0:26:75.24:0,75,929	0/0:26,0:26:75.17:0,75,887	0/0:25,0:25:66.19:0,66,806	0/0:27,0:27:81.24:0,81,991	0/0:31,0:31:93.22:0,93,1109	0/0:26,0:26:66.07:0,66,778	0/0:23,0:23:63.20:0,63,781	0/0:21,0:21:57.18:0,57,705	0/0:12,0:12:33.01:0,33,373
chr10	3662142	.	GC	G	3565.38	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=13.253;DP=621;FS=0.889;HRun=1;HaplotypeScore=72.9009;InbreedingCoeff=0.9830;MQ=70.35;MQ0=0;MQRankSum=-0.170;QD=38.34;ReadPosRankSum=1.688;VQSLOD=4.3342;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,45:45:99:1719,123,0	0/0:8,0:8:24.08:0,24,383	0/0:11,0:11:31.30:0,31,442	0/0:5,0:5:12.04:0,12,190	0/0:18,0:18:54.17:0,54,833	0/0:27,0:27:78.25:0,78,1214	0/0:27,0:27:81.28:0,81,1288	0/0:24,0:24:72.23:0,72,1118	0/0:28,0:28:81.28:0,81,1293	0/0:26,0:26:78.25:0,78,1192	0/0:21,0:21:63.20:0,63,978	0/0:29,0:29:87.30:0,87,1378	0/0:22,0:22:66.21:0,66,1023	0/0:24,0:24:72.25:0,72,1144	0/0:24,0:24:72.24:0,72,1113	0/0:19,0:19:54.18:0,54,859	1/1:0,48:48:99:1846,132,0	0/0:26,0:26:75.26:0,75,1189	0/0:24,0:24:72.23:0,72,1107	0/0:15,0:15:39.13:0,39,615	0/0:25,0:25:75.24:0,75,1174	0/0:17,0:17:51.16:0,51,787	0/0:11,0:11:33.10:0,33,501	0/0:21,0:21:63.21:0,63,1006	0/0:17,0:17:48.16:0,48,767	0/0:17,0:17:48.16:0,48,765	0/0:15,0:14:45.15:0,45,711	0/0:27,0:27:81.28:0,81,1293
chr10	3662388	.	G	GA	1226.02	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.935;DP=605;FS=0.000;HRun=6;HaplotypeScore=66.0633;InbreedingCoeff=0.9942;MQ=90.76;MQ0=0;MQRankSum=-1.631;QD=32.26;ReadPosRankSum=3.694;VQSLOD=3.8655;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,114,1162	0/0:9,0:9:27.06:0,27,275	0/0:30,0:30:51.09:0,51,510	0/0:22,0:22:39.03:0,39,379	0/0:23,0:23:66.13:0,66,666	0/0:20,0:20:51.09:0,51,512	0/0:20,0:20:57.07:0,57,558	0/0:29,0:29:69.15:0,69,703	0/0:17,0:17:43.91:0,44,434	0/0:25,0:25:72.15:0,72,726	0/0:18,0:18:45.09:0,45,453	0/0:13,0:13:39.09:0,39,397	0/0:27,0:27:72.15:0,72,728	0/0:15,0:15:42.09:0,42,428	0/0:25,0:25:60.13:0,60,611	0/0:15,0:15:36.08:0,36,367	1/1:0,38:38:99:1321,105,0	0/0:22,1:23:31.38:0,31,625	0/0:24,0:24:63.12:0,63,633	0/0:20,0:20:57.13:0,57,581	0/0:21,0:21:57.13:0,57,581	0/0:19,0:19:51.11:0,51,520	0/0:19,0:19:48.11:0,48,490	0/0:17,0:17:42.09:0,42,428	0/0:18,0:18:48.11:0,48,490	0/0:21,0:21:54.10:0,54,544	0/0:24,0:24:66.15:0,66,673	0/0:10,0:10:21.04:0,21,214
chr10	3664214	.	TA	T	1139.67	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=7.509;DP=606;FS=1.097;HRun=10;HaplotypeScore=59.7179;InbreedingCoeff=0.9231;MQ=74.30;MQ0=0;MQRankSum=-3.539;QD=20.35;ReadPosRankSum=1.377;VQSLOD=4.5732;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,114,1245	0/0:8,0:8:24.04:0,24,250	0/0:16,0:16:36.07:0,36,373	0/0:14,0:15:3.26:0,3,227	0/0:31,0:31:81.18:0,81,866	0/0:24,0:24:66.18:0,66,730	0/0:21,0:21:51.14:0,51,564	0/0:28,1:30:59.98:0,60,631	0/0:22,0:22:63.15:0,63,681	0/0:25,0:25:48.11:0,48,518	0/0:23,1:24:34.08:0,34,582	0/0:22,0:22:57.08:0,57,601	0/0:18,1:19:22.07:0,22,471	0/0:18,0:18:42.08:0,42,436	1/1:2,17:20:50.03:423,50,0	0/0:13,0:13:30.08:0,30,332	0/0:32,0:32:90.22:0,90,979	1/1:0,16:16:47.99:417,48,0	0/0:20,0:20:57.15:0,57,623	0/0:18,1:19:10.03:0,10,324	0/0:42,0:42:76.11:0,76,999	0/0:10,0:10:24.06:0,24,259	0/0:10,0:10:24.06:0,24,265	0/0:25,0:25:69.17:0,69,754	1/1:2,18:20:50.99:443,51,0	0/0:23,1:24:63.14:0,63,676	0/0:29,2:31:61.21:0,61,883	0/0:7,0:7:21.06:0,21,232
chr10	3666095	.	CTTT	C	3533.43	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=6.669;DP=588;FS=3.543;HRun=14;HaplotypeScore=92.3373;InbreedingCoeff=0.9777;MQ=72.46;MQ0=2;MQRankSum=-1.577;QD=16.91;ReadPosRankSum=6.814;VQSLOD=2.5672;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,42:47:86.82:1015,87,0	0/0:11,0:11:21.07:0,21,365	0/0:18,0:9:19.17:0,19,253	0/0:19,0:15:17.46:0,17,191	0/0:28,0:30:74.20:0,74,1104	0/0:20,0:22:54.63:0,55,926	0/0:19,0:22:42.09:0,42,630	1/1:5,16:21:44.31:483,44,0	0/0:19,0:19:47.98:0,48,788	0/0:20,0:21:49.34:0,49,664	0/0:12,0:13:33.03:0,33,453	0/0:18,0:18:49.70:0,50,792	0/0:13,0:13:32.93:0,33,438	0/0:15,0:17:36.05:0,36,499	1/1:4,14:18:19.68:335,20,0	0/0:12,0:12:27.08:0,27,433	1/1:4,0:35:46.27:274,46,0	1/1:1,14:15:24.05:281,24,0	0/0:34,0:35:81.08:0,81,1197	0/0:22,0:23:64.68:0,65,969	0/0:26,0:26:63.08:0,63,819	0/0:19,0:19:50.91:0,51,800	0/0:11,0:14:39.11:0,39,617	0/0:23,0:26:75.17:0,75,1186	1/1:2,19:21:19.64:274,20,0	1/1:6,21:27:50.90:552,51,0	1/1:4,14:18:23.24:250,23,0	1/1:0,6:6:6.02:70,6,0
chr10	3666279	.	TC	T	3942.72	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=10.234;DP=603;FS=0.000;HRun=1;HaplotypeScore=59.2220;InbreedingCoeff=0.9997;MQ=83.98;MQ0=0;MQRankSum=-1.816;QD=37.20;ReadPosRankSum=2.719;VQSLOD=4.0648;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,50:50:99:1802,129,0	0/0:16,0:16:48.15:0,48,743	0/0:14,0:14:36.12:0,36,575	0/0:24,0:24:60.13:0,60,905	0/0:20,0:20:57.19:0,57,886	0/0:25,0:25:75.25:0,75,1180	0/0:11,0:11:33.10:0,33,504	0/0:31,0:30:90.29:0,90,1388	0/0:21,0:21:63.21:0,63,995	0/0:23,0:23:69.21:0,69,1079	0/0:20,0:20:60.20:0,60,959	0/0:15,0:15:45.11:0,45,647	0/0:10,0:10:30.10:0,30,472	0/0:19,0:19:57.19:0,57,902	1/1:0,13:13:39.13:546,39,0	0/0:25,0:25:75.26:0,75,1199	0/0:26,0:26:78.27:0,78,1238	1/1:0,18:18:45.15:629,45,0	0/0:27,0:27:81.26:0,81,1242	0/0:18,0:18:51.17:0,51,815	0/0:23,0:23:69.21:0,69,1078	0/0:20,0:20:57.18:0,57,888	0/0:13,0:13:39.13:0,39,603	0/0:30,0:30:90.31:0,90,1439	1/1:0,25:25:69.23:965,69,0	0/0:18,0:18:54.18:0,54,854	0/0:34,0:34:99:0,99,1560	0/0:14,0:14:42.14:0,42,671
chr10	3666468	.	AC	A	3112.74	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=10.224;DP=630;FS=0.000;HRun=2;HaplotypeScore=62.0458;InbreedingCoeff=0.9318;MQ=90.88;MQ0=0;MQRankSum=-4.055;QD=34.97;ReadPosRankSum=1.574;VQSLOD=3.8808;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,30:31:87.28:1130,87,0	0/0:12,1:13:0.17:0,0,501	0/0:27,0:27:75.25:0,75,1093	0/0:23,0:23:69.23:0,69,998	0/0:23,0:23:66.22:0,66,989	0/0:15,0:15:45.15:0,45,674	0/0:16,0:16:48.15:0,48,698	0/0:36,0:36:99:0,99,1414	0/0:27,0:27:75.25:0,75,1124	0/0:28,0:28:78.26:0,78,1169	0/0:19,0:19:57.19:0,57,853	0/0:17,0:17:51.17:0,51,764	0/0:22,0:22:60.20:0,60,899	0/0:33,0:33:96.30:0,96,1394	1/1:0,17:17:42.14:545,42,0	0/0:28,0:28:81.27:0,81,1213	0/0:22,0:22:66.22:0,66,986	1/1:0,11:11:33.11:428,33,0	0/0:17,0:17:45.15:0,45,671	0/0:21,0:21:63.20:0,63,919	0/0:20,0:20:60.20:0,60,899	0/0:28,0:28:84.28:0,84,1253	0/0:18,0:18:48.16:0,48,719	0/0:26,0:26:75.20:0,75,1080	1/1:0,30:30:90.29:1169,90,0	0/0:22,0:22:66.22:0,66,989	0/0:29,0:29:87.26:0,87,1279	0/0:11,0:11:33.11:0,33,494
chr10	3669251	.	C	CTA	408.69	PASS	AC=8;AF=0.308;AN=26;BaseQRankSum=-1.984;DP=544;FS=10.942;HRun=0;HaplotypeScore=6.0216;InbreedingCoeff=0.4798;MQ=10.86;MQ0=257;MQRankSum=1.354;QD=10.22;ReadPosRankSum=-0.346;VQSLOD=1.2516;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:12,2:2:6.02:115,6,0	./.	./.	./.	0/0:31,1:4:6.02:0,6,92	./.	./.	./.	./.	0/0:32,0:2:6.02:0,6,92	./.	./.	0/0:25,0:5:3.01:0,3,46	./.	1/1:5,3:4:9.03:173,9,0	0/0:17,0:3:3.01:0,3,46	./.	./.	0/0:36,0:4:12.04:0,12,181	0/0:39,0:4:3.01:0,3,46	0/0:55,0:3:3.01:0,3,46	./.	0/0:24,1:3:3.01:0,3,46	0/0:27,0:1:3.01:0,3,46	1/1:4,6:2:6.02:111,6,0	1/1:4,4:3:6.02:116,6,0	./.	./.
chr10	3671767	.	TG	T	1392.05	PASS	AC=18;AF=1.000;AN=18;DP=154;FS=0.000;HRun=1;HaplotypeScore=37.4971;MQ=20.44;MQ0=66;QD=13.13;VQSLOD=2.0931;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	1/1:2,8:8:20.95:168,21,0	./.	./.	1/1:5,12:12:29.87:236,30,0	./.	./.	./.	./.	1/1:4,6:6:17.86:128,18,0	1/1:7,11:10:26.93:217,27,0	./.	./.	./.	./.	./.	./.	./.	./.	1/1:6,8:9:23.95:193,24,0	./.	1/1:4,7:7:17.92:142,18,0	1/1:3,8:8:17.97:147,18,0	./.	1/1:3,7:7:20.95:167,21,0	1/1:1,4:4:8.95:66,9,0	./.	./.
chr10	3672083	.	G	GT	816.92	PASS	AB=0.835;AC=3;AF=0.054;AN=56;BaseQRankSum=8.408;DP=1313;DS;FS=4.328;HRun=3;HaplotypeScore=85.8657;InbreedingCoeff=-0.0638;MQ=38.38;MQ0=532;MQRankSum=-7.528;QD=4.13;ReadPosRankSum=3.966;VQSLOD=0.6861;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:26:69.21:0,69,821	0/0:16,0:14:42.13:0,42,499	0/0:51,0:23:60.01:0,60,668	0/0:42,0:23:53.11:0,53,723	0/0:57,0:30:81.25:0,81,964	0/0:63,0:28:63.19:0,63,753	0/0:53,0:16:36.11:0,36,431	0/0:116,0:27:81.25:0,81,970	0/0:40,0:22:51.15:0,51,605	0/0:94,0:43:99:0,126,1512	0/0:52,0:28:78.24:0,78,926	0/0:27,0:14:36.11:0,36,431	0/0:50,0:19:48.15:0,48,573	0/0:32,0:22:51.16:0,51,611	0/0:37,0:24:69.21:0,69,824	0/0:29,0:22:63.19:0,63,749	0/0:31,0:22:57.17:0,57,684	0/0:20,1:16:2.57:0,3,414	0/0:46,0:12:30.09:0,30,360	0/0:61,0:40:99:0,108,1293	0/0:22,0:20:53.90:0,54,606	0/0:48,0:30:90.28:0,90,1075	0/0:38,0:25:69.21:0,69,818	0/0:33,0:31:87.27:0,87,1044	0/0:20,0:17:48.15:0,48,575	0/1:68,11:38:99:255,0,927	0/1:70,12:38:99:263,0,861	0/1:25,12:33:99:398,0,623
chr10	3676722	.	G	GTGGGTATA	11967.56	PASS	AB=0.809;AC=18;AF=0.321;AN=56;BaseQRankSum=-7.804;DP=620;FS=0.404;HRun=0;HaplotypeScore=133.0222;InbreedingCoeff=0.8190;MQ=53.66;MQ0=8;MQRankSum=-14.917;QD=70.40;ReadPosRankSum=-0.956;VQSLOD=4.5895;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,7:11:15.03:557,15,0	0/0:8,0:8:24.08:0,24,653	0/0:29,0:20:52.73:0,53,1340	0/0:22,0:12:35.71:0,36,908	0/0:26,0:26:72.23:0,72,1997	0/0:22,0:22:66.21:0,66,1833	0/0:15,0:15:42.14:0,42,1150	1/1:12,15:20:60.08:2221,60,0	0/0:32,0:32:70.29:0,70,2317	0/0:31,0:31:84.27:0,84,2344	0/1:18,0:16:52.40:52,0,1148	0/0:29,0:29:84.27:0,84,2290	0/0:18,0:18:51.15:0,51,1399	0/0:26,0:26:75.24:0,75,2091	1/1:8,17:26:57.11:2306,57,0	0/0:22,0:22:66.20:0,66,1747	1/1:3,6:9:15.05:667,15,0	1/1:2,3:5:12:344,12,0	0/0:31,0:28:78.27:0,78,2179	0/0:24,0:24:66.20:0,66,1742	0/0:45,0:45:99:0,102,3409	0/0:22,0:22:54.19:0,54,1543	0/0:23,0:23:60.19:0,60,1636	0/0:22,0:22:66.16:0,66,1718	1/1:2,12:12:18.06:802,18,0	0/1:11,17:28:99:2793,0,249	1/1:6,12:19:39.13:1693,39,0	1/1:2,5:6:12.04:532,12,0
chr10	3677329	.	AT	A	3835.67	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=10.540;DP=594;FS=2.884;HRun=3;HaplotypeScore=76.1829;InbreedingCoeff=0.9938;MQ=59.58;MQ0=1;MQRankSum=0.317;QD=32.51;ReadPosRankSum=0.201;VQSLOD=3.9223;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:87.29:0,87,1251	0/0:10,0:10:27.08:0,27,371	0/0:13,0:8:18.05:0,18,245	0/0:12,0:9:18.05:0,18,236	0/0:25,0:21:57.19:0,57,820	0/0:16,0:16:48.16:0,48,691	0/0:15,0:15:45.15:0,45,647	1/1:0,28:28:84.26:1041,84,0	0/0:13,0:13:36.11:0,36,498	0/0:36,0:35:99:0,105,1471	0/0:32,0:32:93.31:0,93,1334	0/0:21,0:20:57.19:0,57,813	0/0:22,0:22:63.20:0,63,889	0/0:13,0:13:36.12:0,36,518	0/0:28,0:27:81.26:0,81,1133	0/0:18,0:18:51.17:0,51,734	1/1:3,21:24:17.47:664,17,0	0/0:14,0:14:42.10:0,42,580	0/0:24,0:24:69.23:0,69,993	0/0:34,0:34:99:0,99,1387	0/0:19,0:19:51.17:0,51,734	0/0:24,0:22:48.16:0,48,689	0/0:18,0:16:45.15:0,45,647	0/0:22,0:22:63.17:0,63,863	0/0:16,0:14:39.04:0,39,512	1/1:1,16:17:48.13:582,48,0	1/1:1,30:31:81.25:1004,81,0	1/1:4,14:15:45.13:545,45,0
chr10	3678995	.	A	AT	2407.38	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-8.043;DP=623;FS=4.271;HRun=7;HaplotypeScore=61.4635;InbreedingCoeff=0.9859;MQ=58.43;MQ0=4;MQRankSum=3.304;QD=27.67;ReadPosRankSum=2.695;VQSLOD=4.5681;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,23:27:43.44:736,43,0	0/0:11,0:11:30.05:0,30,290	0/0:15,0:11:18:0,18,164	0/0:18,0:10:11.71:0,12,98	0/0:32,0:32:84.13:0,84,811	0/0:25,0:25:72.09:0,72,688	0/0:17,0:17:33.02:0,33,313	0/0:30,0:29:69.05:0,69,652	0/0:24,0:24:60.06:0,60,572	0/0:28,0:28:75.10:0,75,719	0/0:27,0:27:75.12:0,75,723	0/0:16,0:16:39.06:0,39,377	0/0:18,0:18:48.07:0,48,463	0/0:15,0:15:42.07:0,42,405	1/1:3,17:20:45.14:543,45,0	0/0:24,0:24:66.10:0,66,637	0/0:33,0:33:93.08:0,93,887	1/1:4,25:29:75.19:890,75,0	0/0:20,0:16:42.06:0,42,406	0/0:46,1:46:99:0,123,1182	0/0:11,0:11:30.05:0,30,289	0/0:16,0:16:39.04:0,39,370	0/0:19,0:19:51.06:0,51,487	0/0:19,0:19:54.08:0,54,520	1/1:0,11:11:33.10:399,33,0	0/0:25,0:25:66.10:0,66,637	0/0:40,0:40:99:0,114,1100	0/0:6,0:6:18.03:0,18,174
chr10	3679569	.	TCTGTTGAGGC	T	3972.79	PASS	AB=0.667;AC=7;AF=0.125;AN=56;BaseQRankSum=9.931;DP=674;FS=0.000;HRun=0;HaplotypeScore=186.2024;InbreedingCoeff=0.8363;MQ=61.70;MQ0=3;MQRankSum=-10.524;QD=53.69;ReadPosRankSum=1.309;VQSLOD=3.3802;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:17,13:26:33.11:1053,33,0	0/0:10,0:10:30.10:0,30,1552	0/0:30,0:22:57.19:0,57,2165	0/0:23,0:21:60.21:0,60,2502	0/0:36,0:36:96.33:0,96,4650	0/0:34,0:33:84.29:0,84,4205	0/0:16,0:16:45.15:0,45,2211	0/0:29,0:29:75.26:0,75,3672	0/0:25,0:25:60.19:0,60,2994	0/0:32,0:32:87.30:0,87,4407	0/0:21,0:21:57.18:0,57,2741	0/0:14,0:14:39.13:0,39,2035	0/0:36,0:35:81.07:0,81,3964	0/0:15,0:15:36.12:0,36,1833	1/1:3,19:18:48.12:1476,48,0	0/0:22,0:22:63.22:0,63,3195	0/0:36,0:35:96.31:0,96,4702	0/1:4,4:8:46.46:279,0,46	0/0:20,0:17:51.18:0,51,2516	0/0:29,0:29:72.23:0,72,3384	0/0:19,0:19:48.16:0,48,2296	0/0:29,0:29:72.25:0,72,3371	0/0:25,0:25:75.26:0,75,3832	0/0:24,0:23:60.21:0,60,3028	1/1:0,14:14:36.12:1165,36,0	0/0:28,0:27:78.25:0,78,3847	0/0:35,0:35:87.30:0,87,4352	0/0:12,0:12:33.11:0,33,1606
chr10	3680781	.	T	TA	3632.57	PASS	AB=0.553;AC=16;AF=0.296;AN=54;BaseQRankSum=12.257;DP=530;FS=3.643;HRun=0;HaplotypeScore=55.2950;InbreedingCoeff=0.7505;MQ=46.98;MQ0=47;MQRankSum=-5.406;QD=25.58;ReadPosRankSum=-1.258;VQSLOD=4.0978;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,16:18:0.29:578,0,0	0/0:10,0:10:30.06:0,30,396	0/0:18,0:3:6.02:0,6,84	./.	0/0:22,0:21:48.16:0,48,671	0/0:27,0:25:63.05:0,63,789	0/0:29,0:27:72.07:0,72,918	1/1:2,5:2:5.97:47,6,0	0/0:17,0:15:30.06:0,30,397	0/0:32,0:30:87.26:0,87,1195	0/0:24,0:24:54.10:0,54,712	0/0:14,0:13:33.09:0,33,431	0/0:18,0:18:44.99:0,45,608	0/0:18,0:17:45.11:0,45,607	1/1:0,14:14:30.10:479,30,0	0/0:16,0:16:42.14:0,42,587	0/1:5,22:23:2.76:535,0,3	1/1:2,10:10:21.07:324,21,0	0/0:22,0:16:48.16:0,48,671	0/0:27,0:27:75.19:0,75,1009	0/0:8,0:8:21.05:0,21,276	0/0:24,0:24:60.02:0,60,736	0/0:22,0:22:66.22:0,66,923	0/0:26,0:26:65.25:0,65,877	1/1:0,10:10:18.06:287,18,0	0/1:4,15:17:32.60:617,0,33	1/1:0,23:18:42.14:669,42,0	1/1:4,5:5:6.02:96,6,0
chr10	3683567	.	T	TA	966.05	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-7.159;DP=720;FS=0.000;HRun=1;HaplotypeScore=72.3365;InbreedingCoeff=0.9989;MQ=78.28;MQ0=0;MQRankSum=0.190;QD=37.16;ReadPosRankSum=0.834;VQSLOD=3.9575;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:31:84.24:0,84,1053	0/0:10,0:10:27.09:0,27,347	0/0:20,0:20:40.57:0,41,519	0/0:18,0:18:50.57:0,51,523	0/0:25,0:25:66.04:0,66,769	0/0:19,0:19:57.10:0,57,698	0/0:25,0:25:61.23:0,61,842	0/0:28,0:28:78.23:0,78,973	0/0:32,0:32:90.17:0,90,1098	0/0:29,0:29:81.23:0,81,1002	0/0:16,0:16:42.14:0,42,540	0/0:35,0:35:99:0,105,1325	0/0:26,0:26:75.18:0,75,909	0/0:23,0:23:63.17:0,63,775	0/0:23,0:23:66.18:0,66,812	0/0:30,0:30:84.23:0,84,1044	1/1:0,26:26:75.25:1061,75,0	0/0:21,0:21:63.18:0,63,797	0/0:21,0:21:63.19:0,63,800	0/0:33,0:33:93.30:0,93,1199	0/0:44,0:44:99:0,126,1534	0/0:32,0:32:78.23:0,78,976	0/0:16,0:16:45.11:0,45,540	0/0:22,0:22:57.16:0,57,699	0/0:23,0:23:60.14:0,60,752	0/0:23,0:21:60.17:0,60,739	0/0:27,0:22:63.13:0,63,778	0/0:40,0:39:99:0,117,1509
chr10	3684953	.	TG	T	4488.85	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=10.413;DP=692;FS=7.148;HRun=8;HaplotypeScore=88.2047;InbreedingCoeff=0.9970;MQ=84.64;MQ0=0;MQRankSum=-2.262;QD=24.94;ReadPosRankSum=2.204;VQSLOD=5.4455;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,46:50:99:1303,135,0	0/0:11,0:11:21.04:0,21,240	0/0:24,1:25:36.38:0,36,654	0/0:20,0:20:44.71:0,45,494	0/0:28,0:28:75.22:0,75,890	0/0:22,0:22:57.17:0,57,688	0/0:20,0:20:48.15:0,48,579	1/1:7,21:28:63.10:608,63,0	0/0:20,0:20:60.16:0,60,700	0/0:11,0:23:40.73:0,41,277	0/0:2,0:8:17.25:0,17,88	0/0:38,0:38:99:0,108,1288	0/0:29,0:29:66.19:0,66,782	0/0:22,0:22:63.19:0,63,761	0/0:3,0:20:49.13:0,49,282	0/0:26,0:26:75.21:0,75,883	1/1:3,39:42:99:1101,114,0	0/0:1,0:10:28.89:0,29,168	0/0:22,1:24:40.10:0,40,734	0/0:24,0:24:66.06:0,66,765	0/0:55,0:55:99:0,144,1722	0/0:26,0:26:69.21:0,69,833	0/0:22,0:22:60.16:0,60,702	0/0:23,0:23:66.20:0,66,797	0/0:4,0:16:37.23:0,37,188	1/1:5,20:27:39.60:578,40,0	1/1:1,18:19:51.08:493,51,0	1/1:0,14:14:42.07:405,42,0
chr10	3685107	.	GA	G	1020.88	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.139;DP=743;FS=0.000;HRun=3;HaplotypeScore=70.9532;InbreedingCoeff=0.9997;MQ=83.91;MQ0=0;MQRankSum=-2.138;QD=30.94;ReadPosRankSum=1.443;VQSLOD=3.4179;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:58:99:0,175,2478	0/0:11,0:11:33.11:0,33,475	0/0:24,0:24:69.22:0,69,973	0/0:23,0:23:60.16:0,60,820	0/0:30,0:30:84.28:0,84,1209	0/0:20,0:20:60.18:0,60,825	0/0:19,0:19:57.17:0,57,802	0/0:26,0:26:78.26:0,78,1124	0/0:33,0:33:99:0,99,1399	0/0:19,0:19:54.18:0,54,778	0/0:28,0:28:84.27:0,84,1191	0/0:26,0:26:78.25:0,78,1106	0/0:24,0:24:66.20:0,66,913	0/0:30,0:30:90.29:0,90,1280	0/0:31,0:31:90.29:0,90,1278	0/0:28,0:28:84.25:0,84,1173	1/1:1,32:33:90.28:1116,90,0	0/0:27,0:27:81.24:0,81,1138	0/0:25,0:25:72.18:0,72,967	0/0:22,0:22:66.21:0,66,934	0/0:37,0:37:99:0,111,1597	0/0:25,0:25:72.21:0,72,980	0/0:28,0:28:84.28:0,84,1204	0/0:28,0:28:81.23:0,81,1141	0/0:21,0:21:63.21:0,63,903	0/0:23,0:23:66.22:0,66,945	0/0:25,0:25:75.24:0,75,1062	0/0:19,0:19:57.19:0,57,821
chr10	3685822	.	AC	A	5337.30	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=11.726;DP=545;FS=3.445;HRun=8;HaplotypeScore=56.7696;InbreedingCoeff=0.9711;MQ=76.84;MQ0=0;MQRankSum=-1.127;QD=24.48;ReadPosRankSum=3.504;VQSLOD=5.7048;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,39:46:99:1042,108,0	0/0:7,0:7:21.06:0,21,254	0/0:11,0:11:29.57:0,30,326	0/0:12,0:12:2.80:0,3,226	0/0:14,0:14:39.12:0,39,468	0/0:19,0:19:51.12:0,51,582	0/0:25,0:25:63.19:0,63,761	1/1:7,18:25:48.05:458,48,0	0/0:16,0:16:45.14:0,45,544	0/0:19,0:19:45.14:0,45,543	0/0:13,0:13:39.10:0,39,449	0/0:15,0:15:33.10:0,33,394	0/0:24,0:24:66.18:0,66,775	0/0:19,0:19:51.13:0,51,599	1/1:4,15:19:48.07:463,48,0	0/0:15,0:15:45.13:0,45,532	1/1:2,18:20:54.09:521,54,0	1/1:0,19:19:57.09:550,57,0	0/0:11,0:11:27.08:0,27,326	0/0:22,0:22:57.16:0,57,677	0/0:25,0:25:66.18:0,66,775	0/0:19,0:19:51.11:0,51,574	0/0:18,0:19:48:0,48,546	0/0:22,0:22:63.17:0,63,739	1/1:3,17:20:48.07:464,48,0	1/1:2,23:25:72.10:689,72,0	1/1:2,27:29:84.10:802,84,0	1/1:1,14:15:36.06:348,36,0
chr10	3687437	.	C	CT	10048.42	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-11.646;DP=700;FS=1.312;HRun=0;HaplotypeScore=68.9543;InbreedingCoeff=0.9991;MQ=88.16;MQ0=0;MQRankSum=-8.737;QD=45.47;ReadPosRankSum=2.352;VQSLOD=5.1397;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,47:47:99:2254,141,0	0/0:7,0:7:21.07:0,21,292	0/0:31,0:31:87.06:0,87,1140	0/0:23,0:23:61.68:0,62,796	0/0:20,0:20:60.20:0,60,835	0/0:19,0:19:57.19:0,57,796	0/0:33,0:33:99:0,99,1360	1/1:1,32:33:96.31:1498,96,0	0/0:17,0:17:51.17:0,51,713	0/0:20,0:20:57.19:0,57,797	0/0:17,0:17:51.17:0,51,713	0/0:34,0:34:99:0,99,1383	0/0:35,0:35:99:0,102,1421	0/0:27,0:27:75.24:0,75,1026	1/1:1,19:20:48.16:767,48,0	0/0:10,0:10:30.10:0,30,419	1/1:0,28:28:81.28:1294,81,0	1/1:0,22:21:60.20:952,60,0	0/0:20,0:20:57.19:0,57,797	0/0:24,0:24:69.23:0,69,961	0/0:73,0:73:99:0,214,2949	0/0:22,0:22:66.22:0,66,916	0/0:15,0:15:45.11:0,45,607	0/0:32,0:32:96.32:0,96,1342	1/1:0,21:21:60.20:959,60,0	1/1:0,19:19:54.17:836,54,0	1/1:0,22:22:66.23:1055,66,0	1/1:0,9:9:27.09:432,27,0
chr10	3688236	.	ATG	A	447.23	PASS	AB=0.935;AC=24;AF=0.500;AN=48;BaseQRankSum=5.099;DP=671;FS=0.707;HRun=0;HaplotypeScore=97.3962;InbreedingCoeff=-0.2546;MQ=67.59;MQ0=11;MQRankSum=-2.386;QD=0.95;ReadPosRankSum=-0.296;VQSLOD=1.2667;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:30:1.77:4,2,0	0/0:11,0:11:6.02:0,6,89	./.	./.	0/0:25,0:24:24.04:0,24,298	0/0:25,0:25:15.48:0,15,183	0/1:27,2:29:40.74:41,0,234	./.	0/0:22,0:22:6.79:0,7,231	0/1:28,2:29:45.35:45,0,151	0/0:15,0:15:9.02:0,9,115	0/1:27,0:28:16.92:17,0,163	0/1:26,0:26:11.33:11,0,241	0/1:27,2:30:40.29:40,0,207	1/1:16,0:25:8.25:42,8,0	0/1:16,2:18:16.12:16,0,162	1/1:11,0:22:5.44:47,5,0	1/1:11,0:21:5.51:27,6,0	0/1:18,2:19:33.49:56,0,33	0/1:18,0:18:51.15:51,0,77	0/1:50,3:53:28.28:28,0,361	0/1:22,1:24:7.45:7,0,417	0/1:10,0:10:11.37:11,0,118	0/1:25,5:30:28.84:29,0,363	1/1:7,0:18:11.36:57,11,0	0/1:20,0:21:58.86:59,0,100	0/1:13,3:16:8.33:8,0,269	./.
chr10	3688511	.	C	CCCAGTCACAGCAGTGTGATCTCATGAGGTCTAG	20762.05	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=6.015;DP=778;FS=1.749;HRun=0;HaplotypeScore=589.7852;InbreedingCoeff=0.8513;MQ=83.02;MQ0=0;MQRankSum=-13.102;QD=130.58;ReadPosRankSum=-5.960;VQSLOD=2.5948;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:33,3:52:52.42:3052,52,0	0/0:13,0:13:36.12:0,36,2604	0/0:30,0:30:63.69:0,64,2809	0/0:25,0:24:58.30:0,58,2897	0/0:14,0:14:36.11:0,36,2016	0/0:18,0:18:54.15:0,54,3505	0/0:26,0:26:75.22:0,75,4608	1/1:35,0:35:99:6965,99,0	0/0:38,0:38:99:0,108,6644	0/0:23,0:23:69.20:0,69,4166	0/0:14,0:13:36.10:0,36,2137	0/0:36,0:36:99:0,108,8026	0/0:18,0:18:51.16:0,51,3361	0/0:40,0:40:99:0,114,7345	0/0:35,0:35:96.33:0,96,6268	0/0:28,0:28:75.24:0,75,5655	0/0:36,0:36:99:0,108,7751	0/0:22,0:22:63.19:0,63,4360	0/0:17,0:17:36.12:0,36,2377	0/0:17,0:17:51.15:0,51,3042	0/0:62,0:62:99:0,175,12004	0/0:24,0:24:69.19:0,69,4589	0/0:21,0:21:57.20:0,57,3853	0/0:36,0:36:99:0,99,7275	0/0:26,0:26:66.20:0,66,5072	0/1:31,0:31:99:4935,0,167	1/1:22,2:37:60.21:5218,60,0	1/1:3,0:3:9.03:593,9,0
chr10	3688521	.	GT	G	547.23	PASS	AB=0.797;AC=3;AF=0.054;AN=56;BaseQRankSum=7.809;DP=766;FS=8.980;HRun=1;HaplotypeScore=93.9334;InbreedingCoeff=-0.0566;MQ=84.15;MQ0=0;MQRankSum=-7.114;QD=8.17;ReadPosRankSum=-0.131;VQSLOD=0.1776;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:89.16:0,89,1304	0/0:13,0:13:39.13:0,39,618	0/0:29,0:29:78.24:0,78,1174	0/0:25,0:24:63.19:0,63,1004	0/0:14,0:14:39.13:0,39,623	0/0:18,0:18:51.17:0,51,815	0/0:26,0:26:78.27:0,78,1245	0/1:22,12:34:99:381,0,932	0/0:38,0:38:99:0,114,1768	0/0:26,0:26:78.27:0,78,1237	0/0:15,0:14:42.14:0,42,669	0/0:38,0:38:99:0,111,1774	0/0:20,0:20:57.19:0,57,911	0/0:43,0:43:99:0,126,1986	0/0:37,0:37:99:0,111,1727	0/0:25,0:25:75.26:0,75,1199	0/0:38,0:38:99:0,114,1770	0/0:21,0:21:63.21:0,63,1007	0/0:15,0:15:45.14:0,45,699	0/0:18,0:18:54.18:0,54,858	0/0:61,0:61:99:0,184,2896	0/0:25,0:25:72.25:0,72,1151	0/0:21,0:21:60.20:0,60,956	0/0:40,0:40:99:0,120,1913	0/0:22,0:22:66.23:0,66,1053	0/1:20,7:27:99:203,0,832	0/0:27,0:27:75.26:0,75,1194	0/1:5,1:6:63.32:63,0,174
chr10	3688524	.	AG	A	443.97	PASS	AB=0.790;AC=3;AF=0.054;AN=56;BaseQRankSum=7.613;DP=755;FS=7.367;HRun=2;HaplotypeScore=92.3982;InbreedingCoeff=-0.0565;MQ=83.00;MQ0=0;MQRankSum=-7.219;QD=6.63;ReadPosRankSum=-0.159;VQSLOD=0.3050;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:89.17:0,89,1261	0/0:13,0:13:39.13:0,39,567	0/0:28,0:28:78.22:0,78,1096	0/0:23,0:22:62.62:0,63,844	0/0:15,0:15:39.12:0,39,564	0/0:17,0:17:51.16:0,51,745	0/0:26,0:26:75.25:0,75,1124	0/1:24,12:36:99:340,0,970	0/0:36,0:36:99:0,105,1561	0/0:25,0:25:69.23:0,69,1015	0/0:15,0:14:42.13:0,42,609	0/0:39,0:39:99:0,111,1606	0/0:20,0:20:60.20:0,60,888	0/0:42,0:42:99:0,123,1802	0/0:33,0:33:99:0,99,1459	0/0:25,0:25:75.25:0,75,1115	0/0:38,0:38:99:0,111,1662	0/0:20,0:20:60.20:0,60,899	0/0:16,0:16:47.51:0,48,663	0/0:16,0:16:48.15:0,48,700	0/0:60,0:60:99:0,178,2603	0/0:26,0:26:72.23:0,72,1057	0/0:20,0:20:57.19:0,57,844	0/0:40,0:40:99:0,120,1792	0/0:21,0:21:63.20:0,63,925	0/1:19,7:26:99:182,0,775	0/0:30,0:30:84.24:0,84,1213	0/1:4,1:5:21.53:22,0,165
chr10	3689396	.	GA	G	1385.58	PASS	AB=0.944;AC=7;AF=0.125;AN=56;BaseQRankSum=7.639;DP=575;FS=3.650;HRun=10;HaplotypeScore=63.1887;InbreedingCoeff=0.7581;MQ=78.34;MQ0=1;MQRankSum=0.628;QD=16.69;ReadPosRankSum=-0.116;VQSLOD=3.9719;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,1:26:37.09:0,37,624	0/0:8,0:9:20.88:0,21,206	0/0:23,0:23:0.14:0,0,223	0/1:16,1:15:29.62:30,0,128	0/0:23,0:23:54.14:0,54,595	0/0:20,0:21:56.99:0,57,612	0/0:24,0:26:69:0,69,735	0/0:22,0:23:56.96:0,57,594	0/0:15,0:15:17.21:0,17,368	0/0:33,1:35:63.99:0,64,897	0/0:15,0:15:39.11:0,39,431	0/0:21,0:21:51.14:0,51,564	0/0:27,0:27:69.15:0,69,749	0/0:15,0:16:44.92:0,45,461	1/1:1,24:25:71.98:625,72,0	0/0:13,0:13:33.07:0,33,356	0/0:3,0:19:42.76:0,43,223	1/1:3,20:23:23.81:436,24,0	0/0:17,0:18:47.94:0,48,498	0/0:21,0:21:54.13:0,54,583	0/0:18,0:18:54.13:0,54,587	0/0:19,0:19:45.12:0,45,498	0/0:18,1:19:25.06:0,25,491	0/0:20,0:20:57.15:0,57,631	1/1:0,18:18:50.99:443,51,0	0/0:30,1:31:55.13:0,55,810	0/0:27,0:27:66.18:0,66,730	0/0:7,0:6:12.03:0,12,133
chr10	3690228	.	AG	A	2222.12	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=8.869;DP=568;FS=13.174;HRun=3;HaplotypeScore=79.3037;InbreedingCoeff=0.9901;MQ=84.33;MQ0=0;MQRankSum=-2.012;QD=32.68;ReadPosRankSum=-1.342;VQSLOD=2.1473;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,111,1562	0/0:8,0:8:24.08:0,24,346	0/0:24,0:23:63.21:0,63,884	0/0:24,0:24:58.72:0,59,885	0/0:11,0:11:27.09:0,27,389	0/0:18,0:18:54.16:0,54,756	0/0:31,0:31:93.29:0,93,1303	1/1:2,17:19:51.16:632,51,0	0/0:26,0:26:78.26:0,78,1121	0/0:17,0:17:45.15:0,45,648	0/0:10,0:10:27.09:0,27,387	0/0:30,0:30:87.28:0,87,1235	0/0:20,0:20:60.20:0,60,864	0/0:24,0:24:69.18:0,69,954	0/0:25,0:25:75.25:0,75,1080	0/0:14,0:14:39.13:0,39,556	0/0:30,0:30:90.28:0,90,1273	0/0:24,0:24:69.19:0,69,938	0/0:17,0:17:45.15:0,45,647	0/0:14,0:14:42.14:0,42,604	0/0:23,0:23:60.12:0,60,784	0/0:11,0:11:33.09:0,33,438	0/0:15,0:15:45.15:0,45,648	0/0:28,0:28:84.26:0,84,1174	0/0:18,0:18:54.18:0,54,777	1/1:2,19:21:57.18:707,57,0	1/1:0,24:24:72.23:892,72,0	1/1:0,4:4:12.04:149,12,0
chr10	3690531	.	AG	A	6838.24	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=14.326;DP=554;FS=2.401;HRun=2;HaplotypeScore=63.1187;InbreedingCoeff=0.9869;MQ=77.70;MQ0=0;MQRankSum=-4.329;QD=39.76;ReadPosRankSum=0.737;VQSLOD=5.2952;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,30:31:90.29:1241,90,0	0/0:6,0:6:18.06:0,18,288	0/0:9,0:9:27.02:0,27,393	0/0:16,0:16:42.06:0,42,569	0/0:15,0:15:45.15:0,45,712	0/0:24,0:24:72.23:0,72,1127	0/0:44,0:44:99:0,132,2059	1/1:0,23:23:66.20:905,66,0	0/0:18,0:18:54.18:0,54,863	0/0:17,0:17:51.17:0,51,816	0/0:7,0:7:18.06:0,18,288	0/0:26,0:26:78.19:0,78,1169	0/0:12,0:12:36.12:0,36,569	0/0:17,0:17:51.17:0,51,811	1/1:0,23:23:63.21:881,63,0	0/0:16,0:16:48.14:0,48,742	0/0:31,0:31:87.30:0,87,1381	1/1:0,25:25:69.23:965,69,0	0/0:15,0:15:45.13:0,45,690	0/0:8,0:8:24.07:0,24,360	0/0:65,0:65:99:0,193,3036	0/0:3,0:3:9.03:0,9,144	0/0:9,0:9:27.09:0,27,432	0/0:24,0:24:72.23:0,72,1124	1/1:0,15:15:42.14:587,42,0	1/1:0,20:20:60.20:834,60,0	1/1:0,22:22:63.21:880,63,0	1/1:0,13:13:39.13:545,39,0
chr10	3691937	.	ACACACG	A	1083.43	PASS	AB=0.991;AC=12;AF=0.214;AN=56;BaseQRankSum=9.412;DP=714;FS=3.411;HRun=0;HaplotypeScore=169.1144;InbreedingCoeff=0.3994;MQ=56.90;MQ0=17;MQRankSum=-4.307;QD=4.67;ReadPosRankSum=-1.271;VQSLOD=2.6558;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:35,0:35:9.03:130,9,0	0/0:5,0:5:15.04:0,15,221	0/1:34,0:21:29.50:30,0,102	0/1:42,0:22:42.25:42,0,83	0/0:22,0:22:44.46:0,44,945	0/0:21,0:21:45.01:0,45,801	0/0:26,0:26:60.79:0,61,916	0/1:30,0:27:99:260,0,122	0/0:21,0:20:44.98:0,45,1120	0/0:25,0:25:70.45:0,70,1161	0/0:17,0:17:36.01:0,36,754	0/0:25,0:25:66.06:0,66,1590	0/0:29,0:29:68.37:0,68,1314	0/0:26,0:26:63.03:0,63,1657	1/1:12,0:12:16.07:65,16,0	0/0:24,0:24:50.51:0,51,985	0/0:27,0:27:26.39:0,26,332	0/1:17,0:17:1.28:100,0,1	0/0:19,0:18:33.67:0,34,461	0/0:15,0:15:29.89:0,30,553	0/0:65,0:65:99:0,133,2319	0/0:26,0:26:61.13:0,61,1086	0/0:16,0:16:24.03:0,24,541	0/0:41,0:41:92.98:0,93,1872	1/1:21,3:24:17.41:445,17,0	0/1:20,0:20:99:113,0,105	0/0:32,0:32:21.49:0,21,381	0/1:17,1:18:52.84:63,0,53
chr10	3691943	.	GCACACGCACA	G	642.84	PASS	AB=0.983;AC=8;AF=0.143;AN=56;BaseQRankSum=4.428;DP=682;FS=3.697;HRun=0;HaplotypeScore=206.7367;InbreedingCoeff=0.1054;MQ=56.35;MQ0=17;MQRankSum=-3.372;QD=3.28;ReadPosRankSum=-3.657;VQSLOD=2.2212;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:2,34:37:9.03:275,9,0	0/0:5,0:5:15.04:0,15,417	0/1:31,0:18:29.46:29,0,103	0/1:34,0:16:42.25:42,0,83	0/0:20,0:20:50.99:0,51,1662	0/0:20,0:20:48.07:0,48,1438	0/0:24,0:24:66.93:0,67,1669	0/1:33,0:30:99:249,0,227	0/0:18,0:17:44.99:0,45,1769	0/0:27,0:27:80.71:0,81,2147	0/0:17,0:17:42.06:0,42,1325	0/0:24,0:23:66.06:0,66,2420	0/0:30,0:30:75.06:0,75,2337	0/0:24,0:24:63.03:0,63,2520	0/0:13,0:13:18.06:0,18,238	0/0:22,0:22:50.78:0,51,1686	0/0:28,0:28:36.81:0,37,659	0/1:18,0:19:6.41:6,0,345	0/0:19,0:18:37.09:0,37,774	0/0:13,0:13:29.89:0,30,844	0/0:59,0:59:99:0,137,4014	0/0:24,0:24:63.02:0,63,1904	0/0:13,0:13:24.07:0,24,853	0/0:38,0:38:93:0,93,2896	0/1:23,0:23:99:149,0,323	0/1:18,0:19:27.65:28,0,545	0/0:31,0:31:32.86:0,33,941	0/0:17,0:17:26.57:0,27,431
chr10	3691945	.	ACACG	A	2330.47	PASS	AB=0.908;AC=15;AF=0.268;AN=56;BaseQRankSum=9.443;DP=681;FS=6.131;HRun=0;HaplotypeScore=131.4887;InbreedingCoeff=0.5333;MQ=56.27;MQ0=18;MQRankSum=-4.631;QD=9.00;ReadPosRankSum=-1.491;VQSLOD=2.4974;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:38,0:38:9:90,9,0	0/0:5,0:5:14.94:0,15,115	0/1:27,0:16:29.46:29,0,103	0/1:32,0:15:42.61:43,0,83	0/0:20,0:20:22.62:0,23,840	0/0:19,0:19:47.97:0,48,695	0/0:24,0:25:66.76:0,67,910	0/1:34,0:31:60.23:347,0,60	0/0:18,0:17:44.96:0,45,945	0/0:27,0:27:76.78:0,77,1065	0/0:18,0:18:45:0,45,720	0/0:24,0:23:66.04:0,66,1332	0/0:32,0:32:52.58:0,53,1258	0/0:23,0:23:66.04:0,66,1407	1/1:2,12:14:18.06:339,18,0	0/0:22,0:22:53.48:0,53,973	0/0:28,0:28:10.54:0,11,204	0/1:5,15:20:6.07:405,0,6	0/0:17,0:16:8.67:0,9,388	0/0:11,0:11:29.85:0,30,493	0/0:59,0:59:88.38:0,88,2154	0/0:23,0:23:61.05:0,61,931	0/0:13,0:13:24.02:0,24,380	0/0:38,0:38:88.16:0,88,1374	1/1:19,5:24:60:626,60,0	1/1:16,2:18:28.93:280,29,0	0/1:30,1:31:48.36:62,0,48	1/1:15,5:19:17.73:295,18,0
chr10	3691947	.	ACG	A	2782.04	PASS	AB=0.993;AC=19;AF=0.339;AN=56;BaseQRankSum=12.481;DP=668;FS=7.768;HRun=0;HaplotypeScore=103.6674;InbreedingCoeff=0.4354;MQ=56.07;MQ0=18;MQRankSum=-1.263;QD=8.02;ReadPosRankSum=-0.297;VQSLOD=2.7971;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:37,0:37:8.88:59,9,0	0/1:5,0:5:26.06:26,0,32	0/1:27,0:14:29.46:29,0,103	0/1:30,0:12:42.61:43,0,83	0/0:17,0:17:48.92:0,49,639	0/0:18,0:18:19.41:0,19,436	0/0:25,0:25:38.83:0,39,687	0/1:36,0:33:23.70:429,0,24	0/0:18,0:17:30.72:0,31,658	0/0:28,0:28:61.81:0,62,789	0/0:15,0:15:33.69:0,34,525	0/0:26,0:25:51.77:0,52,918	0/0:29,0:29:48.84:0,49,910	0/0:23,0:23:65.21:0,65,985	1/1:14,0:14:17.93:138,18,0	0/0:23,0:23:33.72:0,34,699	0/1:28,0:28:91:91,0,139	0/1:18,1:19:11.59:199,0,12	0/0:18,0:17:29.64:0,30,316	0/0:10,0:10:29.85:0,30,378	0/1:58,0:58:35.64:36,0,1399	0/0:22,0:22:33.54:0,34,641	0/0:12,0:12:23.88:0,24,220	0/0:37,0:37:92.88:0,93,1053	1/1:25,0:25:62.75:498,63,0	1/1:3,14:17:47.39:539,47,0	1/1:4,27:31:32.03:593,32,0	1/1:7,13:19:26.99:298,27,0
chr10	3691949	.	GCA	G	1079.10	PASS	AB=0.932;AC=22;AF=0.407;AN=54;BaseQRankSum=9.604;DP=666;FS=21.566;HRun=0;HaplotypeScore=107.5271;InbreedingCoeff=-0.0094;MQ=56.05;MQ0=18;MQRankSum=1.753;QD=2.68;ReadPosRankSum=1.825;VQSLOD=0.4398;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:37,0:37:9.52:49,10,0	1/1:2,3:5:9.03:102,9,0	0/0:24,0:13:3.01:0,3,46	./.	0/0:18,0:19:21.98:0,22,465	0/1:13,2:16:47.04:47,0,186	0/1:22,4:26:34.56:35,0,355	0/0:37,0:34:28.05:0,28,274	0/0:17,1:17:5.07:0,5,512	0/1:25,0:25:3.93:4,0,376	0/1:12,1:14:3.97:4,0,340	0/0:23,3:25:11.08:0,11,586	0/1:26,3:29:30.99:31,0,645	0/0:22,0:22:54.15:0,54,766	0/1:15,0:15:44.45:46,0,44	0/1:20,4:24:23.25:23,0,517	0/0:27,0:27:8.61:0,9,49	0/1:19,0:19:18.21:88,0,18	0/1:16,2:17:29.20:29,0,166	0/0:10,0:10:15.05:0,15,226	0/1:52,5:57:99:192,0,982	0/1:20,2:22:35.62:36,0,331	0/0:6,0:13:11.99:0,12,102	0/0:18,0:36:57.05:0,57,630	0/1:27,0:27:29.10:33,0,29	1/1:18,0:18:6.94:157,7,0	1/1:30,0:30:1.49:226,1,0	1/1:21,0:19:25.46:145,25,0
chr10	3692355	.	T	TAAA	3942.18	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=-3.515;DP=458;FS=10.738;HRun=10;HaplotypeScore=70.3553;InbreedingCoeff=0.8891;MQ=72.78;MQ0=0;MQRankSum=-1.982;QD=31.04;ReadPosRankSum=-1.713;VQSLOD=1.4108;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,0:21:35.83:270,36,0	0/0:11,0:12:26.97:0,27,310	0/1:15,0:13:7.67:8,0,172	0/0:8,0:8:11.94:0,12,107	0/0:27,0:27:66.14:0,66,801	0/0:16,0:16:42.10:0,42,511	0/0:16,0:16:21.77:0,22,476	1/1:13,13:31:67.02:1070,67,0	0/0:10,0:10:24.06:0,24,292	0/0:23,0:23:60.16:0,60,718	0/0:12,0:14:22.32:0,22,289	0/0:13,0:13:30.05:0,30,365	0/0:16,0:17:39:0,39,456	0/0:15,0:15:45.10:0,45,522	0/0:11,0:11:33.09:0,33,389	0/0:16,0:15:45.14:0,45,547	0/0:21,0:21:55.04:0,55,659	0/0:22,0:22:48.11:0,48,583	0/0:18,0:18:14.02:0,14,413	0/0:10,0:10:30.09:0,30,365	0/0:10,0:10:24.01:0,24,290	0/0:13,0:13:36.08:0,36,438	0/0:10,0:10:30.09:0,30,365	0/0:13,0:13:36.10:0,36,436	0/0:16,0:16:45.11:0,45,547	1/1:3,16:19:48.16:879,48,0	1/1:1,18:19:45.15:865,45,0	1/1:5,16:22:45.15:850,45,0
chr10	3694417	.	CCACACACACA	C	1260.71	PASS	AB=0.826;AC=6;AF=0.115;AN=52;BaseQRankSum=4.060;DP=561;FS=12.013;HRun=0;HaplotypeScore=154.1761;InbreedingCoeff=0.5304;MQ=61.01;MQ0=32;MQRankSum=-6.550;QD=17.04;ReadPosRankSum=0.911;VQSLOD=1.9663;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:17.87:0,18,170	0/0:11,0:12:21.07:0,21,664	./.	0/0:44,0:19:0:0,0,1	0/0:14,0:15:24.08:0,24,752	0/0:17,0:18:24.55:0,25,891	0/0:19,0:19:21.05:0,21,694	0/0:15,0:14:10.92:0,11,62	0/0:20,0:20:18.06:0,18,618	0/0:18,0:20:27.09:0,27,918	0/0:11,0:11:12.04:0,12,300	0/0:10,0:11:21.06:0,21,697	0/0:13,0:13:15.05:0,15,461	0/0:9,0:10:14.64:0,15,438	1/1:7,5:19:26.96:560,27,0	0/0:16,0:15:24.08:0,24,779	0/1:15,8:22:99:357,0,115	0/1:9,0:10:61.57:62,0,68	0/0:10,0:10:6.02:0,6,180	0/0:22,0:22:18.06:0,18,654	0/0:45,0:46:54.12:0,54,1734	0/0:20,0:20:32.85:0,33,856	0/0:11,0:10:6.02:0,6,283	0/0:30,0:33:45.15:0,45,1453	1/1:8,12:22:17.98:415,18,0	0/0:17,0:19:21.07:0,21,345	0/0:14,0:23:40.20:0,40,551	./.
chr10	3694571	.	TGTGTGAGAGAGA	T	192.87	PASS	AB=1.000;AC=9;AF=0.167;AN=54;BaseQRankSum=5.467;DP=532;FS=9.804;HRun=0;HaplotypeScore=153.8880;InbreedingCoeff=-0.0326;MQ=51.53;MQ0=19;MQRankSum=-3.796;QD=1.19;ReadPosRankSum=-0.303;VQSLOD=2.2907;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,32:33:3.01:115,3,0	0/1:7,0:7:55.86:56,0,118	./.	0/0:7,0:2:3.01:0,3,65	0/0:22,0:22:21.05:0,21,307	0/0:20,0:20:3.52:0,4,1151	0/0:25,0:24:23.53:0,24,908	0/0:19,0:17:33.86:0,34,289	0/0:31,0:31:81.72:0,82,2279	0/0:19,0:18:54.18:0,54,1541	0/0:17,0:17:48.16:0,48,1772	0/0:21,0:21:45.13:0,45,736	0/0:17,0:17:4.83:0,5,304	0/0:15,0:14:24.14:0,24,351	0/1:17,0:17:15.60:16,0,397	0/0:17,0:17:44.97:0,45,1453	0/1:33,0:32:61.29:61,0,633	0/1:20,0:20:20.30:20,0,338	0/1:15,0:14:5.78:6,0,550	0/0:13,0:11:20.93:0,21,836	0/1:21,0:16:40.10:40,0,218	0/0:21,0:19:43.96:0,44,1397	0/0:18,0:18:29.80:0,30,1085	0/0:19,0:18:39.09:0,39,1679	0/1:13,0:11:10.03:10,0,147	0/0:22,0:22:57.53:0,58,1557	0/0:29,0:29:82.50:0,83,2799	0/0:14,0:12:31.90:0,32,855
chr10	3694575	.	TGAGAGA	T	669.70	PASS	AB=0.882;AC=21;AF=0.420;AN=50;BaseQRankSum=4.111;DP=531;FS=0.000;HRun=0;HaplotypeScore=112.2538;InbreedingCoeff=0.6482;MQ=51.24;MQ0=18;MQRankSum=-3.060;QD=3.10;ReadPosRankSum=0.716;VQSLOD=2.0454;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:36,0:33:3.01:42,3,0	1/1:6,0:6:6.02:121,6,0	./.	./.	1/1:11,11:22:3.01:61,3,0	0/0:20,0:20:21.07:0,21,493	0/0:26,0:25:15.38:0,15,296	0/0:20,0:17:3.01:0,3,63	0/0:30,0:30:27.08:0,27,710	0/0:20,0:19:35.87:0,36,635	0/0:18,0:18:36.10:0,36,885	1/1:14,5:20:3.01:61,3,0	1/1:11,6:17:3.01:33,3,0	./.	1/1:8,0:16:6.02:84,6,0	0/0:17,0:17:23.54:0,24,677	1/1:16,1:31:9.03:153,9,0	1/1:13,0:22:3.48:43,3,0	0/1:13,2:14:93.46:93,0,104	0/0:16,0:14:21.80:0,22,528	1/1:19,0:14:6.02:105,6,0	0/0:22,0:20:20.39:0,20,576	0/0:21,0:21:23.83:0,24,640	0/0:20,0:19:36.10:0,36,896	1/1:7,0:10:3.01:42,3,0	0/0:21,0:21:14.75:0,15,712	0/0:29,0:29:61.05:0,61,1436	0/0:15,0:13:22.25:0,22,377
chr10	3696531	.	TAC	T	476.71	PASS	AB=0.939;AC=17;AF=0.340;AN=50;BaseQRankSum=4.789;DP=685;FS=9.619;HRun=0;HaplotypeScore=119.1595;InbreedingCoeff=-0.1052;MQ=66.39;MQ0=25;MQRankSum=-1.549;QD=1.34;ReadPosRankSum=1.132;VQSLOD=1.8999;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:32,1:34:37.97:38,0,213	0/1:7,1:8:16.94:27,0,17	./.	./.	0/0:11,0:11:9.01:0,9,109	0/1:17,3:20:43.99:44,0,180	0/1:22,5:27:99:103,0,187	0/0:14,0:14:1.25:0,1,3	0/0:21,0:20:0.63:0,1,386	0/1:21,1:22:14.46:14,0,198	0/0:12,1:13:3.48:0,3,36	0/0:30,0:29:32.97:0,33,406	0/1:24,3:27:32.84:33,0,348	0/1:20,0:20:23.47:23,0,80	1/1:16,0:28:28.41:140,28,0	0/1:19,1:22:38.05:38,0,199	0/0:37,4:41:21.60:0,22,652	1/1:12,0:14:5.68:28,6,0	0/0:15,0:15:9.01:0,9,111	0/0:24,0:24:1.63:0,2,61	0/1:41,0:41:17.53:18,0,85	0/1:28,0:28:8.06:8,0,300	./.	0/1:30,2:32:46.29:46,0,527	1/1:24,0:31:14.16:69,14,0	0/0:19,0:19:15.01:0,15,144	0/0:19,0:29:21:0,21,193	0/0:4,0:4:6.02:0,6,84
chr10	3698563	.	G	GGCCTGGCGCTGCCAGTT	17040.33	PASS	AB=0.658;AC=11;AF=0.196;AN=56;BaseQRankSum=-2.266;DP=659;FS=0.000;HRun=0;HaplotypeScore=278.1699;InbreedingCoeff=0.8854;MQ=88.59;MQ0=0;MQRankSum=-13.142;QD=148.18;ReadPosRankSum=-1.248;VQSLOD=4.1671;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:14,7:28:59.94:3086,60,0	0/0:8,0:8:24.06:0,24,985	0/0:24,0:24:69.23:0,69,2426	0/0:25,0:26:44.66:0,45,2220	0/0:21,0:21:60.18:0,60,2652	0/0:21,0:21:63.22:0,63,3033	0/0:23,0:23:69.24:0,69,3260	0/0:29,0:29:87.29:0,87,3688	0/0:28,0:28:81.26:0,81,3802	0/0:20,0:20:60.19:0,60,2820	0/0:16,0:16:48.15:0,48,2282	0/0:30,0:30:90.31:0,90,4196	0/0:29,0:29:87.27:0,87,3869	0/0:21,0:21:63.22:0,63,3008	0/0:31,0:31:93.31:0,93,4404	0/0:25,0:25:75.25:0,75,3613	0/0:30,0:30:90.31:0,90,4415	1/1:5,7:16:36.08:2542,36,0	0/0:23,0:23:69.22:0,69,3142	0/0:11,0:11:33.11:0,33,1560	0/0:51,0:51:99:0,153,7048	0/0:18,0:18:54.19:0,54,2726	0/0:24,0:24:72.22:0,72,3208	0/0:35,0:35:99:0,102,4820	1/1:9,3:18:35.71:1900,36,0	0/1:12,6:25:99:2912,0,320	1/1:6,14:21:60.21:4823,60,0	1/1:2,5:7:21.07:1778,21,0
chr10	3699673	.	A	AGGGC	26605.54	PASS	AB=0.853;AC=28;AF=0.500;AN=56;BaseQRankSum=-6.234;DP=951;FS=6.091;HRun=0;HaplotypeScore=163.0602;InbreedingCoeff=-0.2860;MQ=66.50;MQ0=0;MQRankSum=-17.029;QD=31.34;ReadPosRankSum=-1.606;VQSLOD=3.8554;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,52:58:99:4184,148,0	0/1:15,1:16:41.50:42,0,783	0/1:25,1:26:99:111,0,1114	0/1:18,4:22:99:263,0,540	0/0:28,0:28:66.29:0,66,1680	0/1:20,8:28:99:612,0,1062	0/1:33,5:39:99:412,0,1701	1/1:19,25:54:99:3766,150,0	0/1:26,17:43:99:1539,0,1219	0/1:27,5:33:99:417,0,1424	0/1:15,1:16:38.39:38,0,858	0/1:37,6:43:99:392,0,2103	0/1:24,10:34:99:756,0,1306	0/1:28,3:31:99:277,0,1488	1/1:6,34:42:99:3265,117,0	0/1:27,6:33:99:418,0,1461	0/1:35,10:45:99:816,0,1912	1/1:4,43:49:69.51:3560,70,0	0/1:31,11:43:99:1255,0,1288	0/0:21,0:21:63.20:0,63,1270	0/1:32,3:35:99:267,0,1716	0/0:22,0:22:66.23:0,66,1370	0/0:22,0:22:66.20:0,66,1308	0/1:38,10:48:99:804,0,1882	1/1:3,23:28:75.26:2163,75,0	0/1:37,4:42:99:418,0,2013	0/1:31,10:41:99:833,0,1605	0/0:9,0:9:23.99:0,24,463
chr10	3702976	.	GTGTATGTATGTGTATGCA	G	351.13	PASS	AB=0.841;AC=4;AF=0.071;AN=56;BaseQRankSum=3.402;DP=1105;FS=6.056;HRun=0;HaplotypeScore=481.2286;InbreedingCoeff=0.6630;MQ=56.45;MQ0=14;MQRankSum=-4.427;QD=3.51;ReadPosRankSum=-0.736;VQSLOD=0.4771;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:1.63:0,2,1665	0/0:17,0:17:36.11:0,36,1667	0/0:46,0:19:18.01:0,18,376	0/0:41,0:18:6.02:0,6,99	0/0:43,0:44:78.13:0,78,4208	0/0:15,0:15:24.55:0,25,1083	0/0:17,0:17:27.09:0,27,1246	0/0:58,0:56:66.21:0,66,1916	0/0:53,0:53:99:0,105,5520	0/0:83,0:83:99:0,151,8861	0/0:32,0:32:39.12:0,39,1845	0/0:61,0:61:99:0,123,6829	0/0:56,0:56:99:0,105,6248	0/0:44,0:44:66.21:0,66,3678	0/1:33,29:62:0:0,0,2	0/0:47,0:47:81.23:0,81,4929	0/0:26,0:26:30.10:0,30,1459	1/1:20,2:22:17.65:441,18,0	0/0:20,0:15:30.09:0,30,1474	0/0:30,0:30:63.17:0,63,3242	0/0:66,0:66:99:0,111,6469	0/0:27,0:27:51.08:0,51,2828	0/0:33,0:33:51.16:0,51,2568	0/0:20,0:20:33.10:0,33,1623	0/1:16,0:16:0:0,0,1	0/0:64,0:64:99:0,129,5378	0/0:39,0:39:57.18:0,57,2366	0/0:30,0:30:60.17:0,60,2637
chr10	3703011	.	CATGT	C	4819.37	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=13.147;DP=1084;FS=7.353;HRun=0;HaplotypeScore=182.3225;InbreedingCoeff=0.9723;MQ=54.39;MQ0=17;MQRankSum=0.263;QD=37.36;ReadPosRankSum=4.343;VQSLOD=4.6493;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:35:47.36:0,47,1091	0/0:20,0:20:36.12:0,36,898	0/0:51,0:20:33.90:0,34,650	0/0:53,0:13:30.96:0,31,533	0/0:43,0:43:75.14:0,75,1697	0/0:22,0:22:57.65:0,58,1381	0/0:19,0:19:42.13:0,42,906	0/0:68,0:68:99:0,166,3614	0/0:45,0:45:99:0,111,2526	0/0:81,0:81:99:0,217,5181	0/0:24,0:24:36.11:0,36,814	0/0:62,0:62:99:0,172,4020	0/0:51,0:51:99:0,147,3562	0/0:41,0:41:99:0,114,2831	0/0:38,0:38:12.03:0,12,252	0/0:45,0:45:99:0,126,3159	0/0:35,0:35:27.09:0,27,623	0/0:17,0:17:15.73:0,16,428	0/0:19,0:16:39.12:0,39,922	0/0:30,0:30:81.28:0,81,2076	0/0:62,0:62:99:0,177,4187	0/0:30,0:30:57.13:0,57,1204	0/0:32,0:32:66.16:0,66,1474	0/0:22,0:22:51.18:0,51,1311	0/0:10,0:10:11.75:0,12,309	1/1:4,52:56:99:2505,153,0	1/1:3,43:46:66.18:1141,66,0	1/1:1,26:27:66.23:1174,66,0
chr10	3703066	.	ATATG	A	842.03	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.017;DP=1171;FS=15.522;HRun=0;HaplotypeScore=224.2681;InbreedingCoeff=0.9848;MQ=53.54;MQ0=10;MQRankSum=1.922;QD=18.71;ReadPosRankSum=2.524;VQSLOD=2.1355;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,40:45:50.96:937,51,0	0/0:22,0:22:44.98:0,45,971	0/0:37,0:10:20.90:0,21,425	0/0:34,0:15:32.94:0,33,650	0/0:38,0:38:57.19:0,57,1440	0/0:33,0:33:87.25:0,87,2093	0/0:31,0:31:67.50:0,67,1752	0/0:58,0:55:99:0,135,3245	0/0:40,0:40:99:0,99,2499	0/0:88,0:88:99:0,247,6158	0/0:33,0:33:56.90:0,57,1375	0/0:59,0:59:99:0,160,4065	0/0:55,0:55:99:0,151,3855	0/0:50,0:50:99:0,135,3424	0/0:52,0:52:84.29:0,84,2210	0/0:45,0:45:99:0,126,3083	0/0:39,0:39:16.67:0,17,352	0/0:29,0:30:74.73:0,75,1645	0/0:17,0:14:39.13:0,39,1028	0/0:43,0:43:99:0,126,3225	0/0:51,0:51:99:0,130,3495	0/0:31,0:31:59.73:0,60,1337	0/0:40,0:40:84.10:0,84,2089	0/0:27,0:27:70.28:0,70,1939	0/0:31,0:31:59.64:0,60,1474	0/0:62,0:62:99:0,178,4413	0/0:49,0:49:90.27:0,90,2143	0/0:28,0:27:65.49:0,65,1388
chr10	3703083	.	CATGTGTGT	C	221.02	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.715;DP=1192;FS=3.761;HRun=0;HaplotypeScore=316.6894;InbreedingCoeff=0.7496;MQ=52.08;MQ0=17;MQRankSum=-3.182;QD=5.97;ReadPosRankSum=0.236;VQSLOD=1.8157;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:50:71.35:0,71,2218	0/0:23,0:23:39.06:0,39,1492	0/0:51,0:8:12.93:0,13,302	0/0:40,0:13:22.27:0,22,388	0/0:39,0:39:60.03:0,60,2314	0/0:31,0:31:66.22:0,66,2374	0/0:30,0:30:60.21:0,60,1963	0/0:65,0:61:99:0,120,3598	0/0:41,0:41:99:0,102,3634	0/0:86,0:85:99:0,220,7660	0/0:37,0:36:68.93:0,69,2574	0/0:54,0:54:99:0,135,4748	0/0:54,0:54:99:0,138,5044	0/0:47,0:47:99:0,117,3902	0/0:52,0:52:99:0,105,4072	0/0:34,0:34:87.26:0,87,3365	1/1:11,26:37:2.56:298,3,0	0/0:35,0:35:28.75:0,29,2385	0/0:21,0:17:39.13:0,39,1516	0/0:47,0:47:99:0,126,4502	0/0:44,0:44:96.31:0,96,3550	0/0:40,0:40:72.04:0,72,2841	0/0:41,0:41:72.03:0,72,2464	0/0:28,0:28:65.52:0,66,2065	0/0:34,0:34:59.80:0,60,2238	0/0:60,0:60:99:0,163,6245	0/0:46,0:46:66.22:0,66,2680	0/0:24,0:23:48.16:0,48,1716
chr10	3703327	.	AAGAG	A	130.29	PASS	AC=2;AF=0.038;AN=52;BaseQRankSum=2.478;DP=777;FS=0.000;HRun=0;HaplotypeScore=65.9684;InbreedingCoeff=0.6002;MQ=21.36;MQ0=339;MQRankSum=-1.232;QD=6.51;ReadPosRankSum=1.834;VQSLOD=1.7377;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:71,0:27:33.11:0,33,824	0/0:21,0:13:30.10:0,30,735	./.	./.	0/0:27,0:17:6.02:0,6,132	0/0:30,0:14:18.06:0,18,461	0/0:31,0:10:18.06:0,18,398	0/0:31,0:17:48.16:0,48,1241	0/0:22,0:16:9:0,9,233	0/0:30,0:18:51.18:0,51,1319	0/0:16,0:9:18.06:0,18,443	0/0:16,0:10:21.07:0,21,539	0/0:33,0:16:33.11:0,33,854	0/0:23,0:11:12.04:0,12,287	0/0:29,0:16:21.07:0,21,543	0/0:24,0:15:30.10:0,30,763	1/1:10,10:8:12.04:216,12,0	0/0:31,0:14:27.09:0,27,700	0/0:19,0:5:15.05:0,15,371	0/0:34,0:27:63.21:0,63,1526	0/0:50,0:10:18.06:0,18,466	0/0:24,0:13:18.06:0,18,443	0/0:26,0:13:15.05:0,15,345	0/0:29,0:9:6.02:0,6,155	0/0:26,0:17:30.10:0,30,704	0/0:37,0:17:45.15:0,45,1168	0/0:33,0:15:18.06:0,18,421	0/0:16,0:6:3.01:0,3,78
chr10	3705788	.	TC	T	949.10	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=7.487;DP=750;FS=1.596;HRun=1;HaplotypeScore=54.9857;InbreedingCoeff=0.9020;MQ=49.85;MQ0=45;MQRankSum=-1.254;QD=12.83;ReadPosRankSum=-1.130;VQSLOD=1.9910;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:27:21.07:0,21,335	0/0:13,0:13:36.12:0,36,575	0/0:30,0:2:6.01:0,6,72	0/0:25,0:2:3.01:0,3,44	0/0:29,0:29:78.22:0,78,1193	0/0:36,0:31:78.25:0,78,1223	0/0:27,0:24:63.20:0,63,979	0/0:23,0:14:24.08:0,24,383	0/0:24,0:24:72.23:0,72,1128	0/0:25,0:22:63.20:0,63,981	0/0:33,0:31:84.27:0,84,1317	0/0:19,0:17:48.16:0,48,763	0/0:37,0:34:96.33:0,96,1535	0/0:20,0:19:57.19:0,57,910	1/1:5,25:25:36.12:503,36,0	0/0:24,0:24:69.24:0,69,1096	0/0:26,0:26:78.20:0,78,1193	1/1:2,20:18:24.06:335,24,0	0/0:15,0:14:42.14:0,42,671	0/0:30,0:24:60.20:0,60,959	0/0:28,0:21:48.16:0,48,768	0/0:31,0:29:72.22:0,72,1100	0/0:33,0:26:66.22:0,66,1042	0/0:20,0:20:57.19:0,57,908	1/1:0,22:22:18.06:252,18,0	0/0:28,0:25:75.24:0,75,1176	0/0:39,0:37:99:0,105,1678	0/0:22,0:21:63.20:0,63,953
chr10	3711377	.	CGA	C	344.25	PASS	AB=0.949;AC=15;AF=0.357;AN=42;BaseQRankSum=3.947;DP=665;FS=0.874;HRun=0;HaplotypeScore=81.8796;InbreedingCoeff=-0.1140;MQ=68.62;MQ0=20;MQRankSum=0.135;QD=1.20;ReadPosRankSum=1.658;VQSLOD=1.0548;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:33:51.73:52,0,57	0/1:10,0:10:34.91:48,0,35	./.	./.	./.	./.	0/0:34,0:34:15.98:0,16,354	./.	1/1:20,0:28:22.73:112,23,0	0/0:24,0:28:30.01:0,30,291	0/0:17,0:17:6:0,6,51	0/1:24,1:26:13.85:14,0,144	0/1:27,2:29:36.55:37,0,223	0/0:24,0:22:6.01:0,6,63	0/0:19,0:20:6.94:0,7,247	0/1:19,0:19:19.86:20,0,119	0/1:23,2:26:56.40:56,0,136	0/1:16,3:19:36.29:36,0,256	0/0:20,0:20:9.02:0,9,99	1/1:22,0:20:3:32,3,0	0/0:23,1:24:6.02:0,6,87	1/1:11,0:11:3:32,3,0	./.	0/1:34,2:36:15.95:16,0,293	0/0:13,0:13:3.01:0,3,43	0/0:18,0:17:6:0,6,53	0/1:24,1:25:11.40:27,0,11	./.
chr10	3715197	.	CCATGAGATCTT	C	3607.42	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.586;DP=701;FS=5.205;HRun=0;HaplotypeScore=219.8005;InbreedingCoeff=0.9999;MQ=90.47;MQ0=0;MQRankSum=-8.972;QD=64.42;ReadPosRankSum=0.269;VQSLOD=3.2041;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,34:36:57.20:1961,57,0	0/0:15,0:15:42.14:0,42,2380	0/0:28,0:28:78.26:0,78,3416	0/0:29,0:29:78.89:0,79,3554	0/0:23,0:23:69.21:0,69,3432	0/0:23,0:23:69.24:0,69,3787	0/0:32,0:32:90.30:0,90,4647	1/1:2,18:20:51.14:1647,51,0	0/0:25,0:25:75.24:0,75,4018	0/0:28,0:28:81.27:0,81,4329	0/0:16,0:16:48.15:0,48,2363	0/0:29,0:29:87.30:0,87,4756	0/0:18,0:18:42.11:0,42,2084	0/0:21,0:21:63.20:0,63,3363	0/0:31,0:31:93.29:0,93,4265	0/0:24,0:24:72.22:0,72,3777	0/0:39,0:39:99:0,114,5970	0/0:29,0:28:84.22:0,84,3907	0/0:22,0:22:66.23:0,66,3204	0/0:21,0:21:63.19:0,63,3012	0/0:33,0:33:96.31:0,96,5019	0/0:22,0:22:66.21:0,66,3451	0/0:19,0:19:57.18:0,57,3140	0/0:23,0:23:69.24:0,69,3649	0/0:23,0:23:69.24:0,69,3296	0/0:29,0:29:87.30:0,87,4778	0/0:30,0:30:87.26:0,87,4589	0/0:13,0:13:39.13:0,39,1958
chr10	3716210	.	A	AACAC	234.18	PASS	AB=0.900;AC=4;AF=0.071;AN=56;BaseQRankSum=5.087;DP=749;FS=16.843;HRun=0;HaplotypeScore=177.1739;InbreedingCoeff=-0.0700;MQ=66.18;MQ0=12;MQRankSum=-3.932;QD=2.69;ReadPosRankSum=-2.033;VQSLOD=0.8045;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:36,1:36:34.17:34,0,273	0/0:4,0:4:12.04:0,12,204	0/0:32,0:18:30.10:0,30,507	0/0:42,0:28:54.95:0,55,901	0/0:15,0:15:33.11:0,33,574	0/0:19,0:19:48.15:0,48,803	0/0:40,0:40:87.30:0,87,1504	0/0:28,0:25:58.97:0,59,870	0/0:17,0:17:39.13:0,39,667	0/0:47,0:46:99:0,123,2064	0/0:9,0:9:14.94:0,15,261	0/0:32,1:33:78.16:0,78,1343	0/0:28,0:27:71.86:0,72,1246	0/0:28,0:28:75.26:0,75,1293	0/0:26,0:26:27.07:0,27,373	0/0:24,0:24:66.23:0,66,1145	0/1:20,1:21:1.09:1,0,388	0/1:21,2:23:99:181,0,580	0/0:18,0:18:39.13:0,39,671	0/0:27,0:27:72.23:0,72,1204	0/0:59,0:58:99:0,138,2290	0/0:24,0:24:60.20:0,60,1043	0/0:21,0:21:51.17:0,51,887	0/0:50,0:50:99:0,120,2077	0/0:30,0:30:21.07:0,21,319	0/0:23,0:21:48.15:0,48,711	0/0:18,0:17:42.13:0,42,588	0/1:4,2:6:99:118,0,122
chr10	3716215	.	ACACACATG	A	3111.68	PASS	AB=0.843;AC=16;AF=0.286;AN=56;BaseQRankSum=8.720;DP=753;FS=1.796;HRun=0;HaplotypeScore=214.4652;InbreedingCoeff=0.7460;MQ=61.99;MQ0=13;MQRankSum=-7.989;QD=14.96;ReadPosRankSum=-0.532;VQSLOD=2.8227;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:17,17:33:3:77,3,0	0/0:5,0:4:9.03:0,9,376	0/0:31,0:15:15.05:0,15,405	0/0:41,0:26:30.07:0,30,759	0/0:16,0:16:33.11:0,33,1131	0/0:21,0:21:45.14:0,45,1554	0/0:37,0:37:81.28:0,81,2939	1/1:15,14:25:36.11:630,36,0	0/0:16,0:16:36.12:0,36,1366	0/0:50,0:48:99:0,102,3627	0/0:11,0:11:18.06:0,18,619	0/0:33,0:33:72.25:0,72,2814	0/0:28,0:27:69.16:0,69,2456	0/0:30,0:30:48.16:0,48,1927	1/1:5,20:25:12.04:302,12,0	0/0:23,0:23:60.21:0,60,2377	0/1:16,4:20:8.50:261,0,8	0/1:18,4:23:56.91:306,0,57	0/0:19,0:18:36.12:0,36,1346	0/0:27,0:27:51.18:0,51,1900	0/0:63,0:62:99:0,114,4249	0/0:23,0:23:57.20:0,57,2350	0/0:21,0:21:39.12:0,39,1359	0/0:49,0:48:99:0,99,3523	1/1:12,17:29:6.02:155,6,0	1/1:13,12:23:30.06:636,30,0	1/1:8,9:16:39.11:843,39,0	1/1:4,2:6:5.61:87,6,0
chr10	3716237	.	ATG	A	619.10	PASS	AB=0.968;AC=9;AF=0.161;AN=56;BaseQRankSum=9.497;DP=752;FS=3.090;HRun=0;HaplotypeScore=142.1153;InbreedingCoeff=0.0362;MQ=51.90;MQ0=33;MQRankSum=-5.849;QD=3.92;ReadPosRankSum=-1.148;VQSLOD=2.9259;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:31:3.57:0,4,218	0/0:7,0:6:11.17:0,11,243	0/0:36,0:8:21.07:0,21,359	0/0:52,1:13:25.46:0,25,428	0/0:18,0:17:39.13:0,39,744	0/0:18,0:17:30.84:0,31,761	0/0:44,0:43:99:0,123,2200	0/1:21,0:15:99:244,0,162	0/0:22,0:21:57.66:0,58,1096	0/0:49,0:45:99:0,111,2525	0/0:13,0:13:26.98:0,27,500	0/0:32,0:32:84.25:0,84,1635	0/0:29,0:28:56.75:0,57,1408	0/0:23,0:23:56.68:0,57,1098	0/1:26,0:26:11.09:34,0,11	0/0:25,0:25:51.27:0,51,1400	0/1:20,1:21:37.24:37,0,447	0/1:21,1:22:57.92:58,0,393	0/0:24,0:17:51.17:0,51,977	0/0:20,0:20:14.80:0,15,1085	0/0:67,1:66:76.22:0,76,2855	0/0:24,0:24:66.23:0,66,1313	0/0:14,0:14:42.13:0,42,784	0/0:42,0:41:99:0,114,2050	0/1:23,0:23:14.35:14,0,29	0/1:15,0:13:49.08:104,0,49	0/1:22,2:22:99:236,0,144	1/1:5,0:5:7.18:33,7,0
chr10	3716255	.	GCA	G	815.40	PASS	AB=0.900;AC=24;AF=0.480;AN=50;BaseQRankSum=6.817;DP=736;FS=3.443;HRun=0;HaplotypeScore=138.0514;InbreedingCoeff=0.0307;MQ=46.80;MQ0=39;MQRankSum=-1.972;QD=1.70;ReadPosRankSum=-0.800;VQSLOD=2.3251;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:32:22.69:122,23,0	0/0:11,0:10:14.83:0,15,136	./.	./.	0/0:14,2:15:0.77:0,1,124	0/1:18,1:17:9.43:9,0,276	0/1:30,8:37:99:120,0,443	./.	0/0:25,0:24:42.09:0,42,550	0/0:46,0:41:56.78:0,57,714	0/0:12,0:14:6.79:0,7,217	0/0:31,0:31:33.10:0,33,468	0/1:29,1:29:68.26:68,0,465	0/0:26,1:26:35.21:0,35,423	1/1:15,0:22:16.83:83,17,0	0/1:25,1:26:24.77:25,0,438	1/1:10,0:24:14.54:69,15,0	0/1:15,0:22:0.88:51,0,1	0/1:23,1:14:11.67:12,0,247	0/1:23,0:22:5.36:5,0,278	0/1:74,1:71:33.95:34,0,901	0/1:21,1:22:18.44:18,0,163	0/1:8,3:10:27.49:27,0,40	0/1:35,2:36:22.26:22,0,467	0/1:15,0:24:8.59:30,0,9	1/1:18,2:16:14.98:137,15,0	1/1:12,9:21:7.93:99,8,0	1/1:3,1:4:5.85:47,6,0
chr10	3718530	.	TAC	T	795.71	PASS	AB=0.944;AC=6;AF=0.107;AN=56;BaseQRankSum=8.626;DP=925;FS=3.165;HRun=0;HaplotypeScore=164.6422;InbreedingCoeff=0.1961;MQ=58.35;MQ0=9;MQRankSum=1.445;QD=4.12;ReadPosRankSum=3.091;VQSLOD=2.9699;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:29:0.98:1,0,43	0/0:10,0:9:15.52:0,16,236	0/0:40,1:19:13.81:0,14,184	0/0:43,0:25:9.07:0,9,222	0/0:26,1:27:19.08:0,19,696	0/0:23,0:23:45.13:0,45,662	0/0:43,1:44:46.06:0,46,1180	0/0:18,0:22:24.87:0,25,280	0/0:37,0:37:83.74:0,84,1200	0/0:47,3:48:12.14:0,12,1166	0/0:15,0:15:24.07:0,24,346	0/0:51,1:52:52.64:0,53,1693	0/0:22,2:24:22.53:0,23,777	0/1:25,2:27:37.90:38,0,707	0/0:46,0:46:23.25:0,23,169	0/0:40,0:40:84.25:0,84,1273	1/1:23,18:42:74.61:814,75,0	0/0:27,0:27:15.37:0,15,135	0/1:23,2:24:21.66:22,0,359	0/0:19,3:22:15.97:0,16,641	0/1:63,3:68:43.32:43,0,1731	0/0:23,1:25:4.66:0,5,659	0/0:25,0:25:42.14:0,42,629	0/0:56,1:56:99:0,123,1845	0/0:21,0:24:5.09:0,5,103	0/0:16,0:40:33.57:0,34,253	0/0:25,0:25:15.06:0,15,153	0/0:8,0:8:1.43:0,1,55
chr10	3718691	.	T	TCA	3781.76	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-6.943;DP=1086;FS=5.300;HRun=0;HaplotypeScore=158.5884;InbreedingCoeff=0.9875;MQ=58.20;MQ0=10;MQRankSum=1.532;QD=30.50;ReadPosRankSum=-0.835;VQSLOD=4.8514;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:43:64.03:0,64,947	0/0:10,0:10:27.06:0,27,312	0/0:55,0:32:39.03:0,39,427	0/0:51,0:21:23.83:0,24,274	0/0:29,0:28:63.07:0,63,748	0/0:15,0:15:36.11:0,36,434	0/0:28,0:29:65.98:0,66,745	0/0:39,0:39:75.18:0,75,854	0/0:47,0:47:99:0,105,1230	0/0:54,0:54:99:0,126,1501	0/0:13,0:13:27.08:0,27,326	0/0:46,0:47:99:0,108,1290	0/0:28,0:30:80.87:0,81,912	0/0:37,0:37:83.47:0,83,946	1/1:10,43:53:99:1719,99,0	0/0:44,0:44:99:0,108,1291	0/0:53,0:53:99:0,129,1541	1/1:8,27:36:33.05:1023,33,0	0/0:31,0:31:49.19:0,49,698	0/0:21,0:21:57.16:0,57,675	0/0:109,0:112:99:0,230,2596	0/0:27,0:29:52.82:0,53,614	0/0:23,0:23:54.15:0,54,637	0/0:65,0:65:99:0,144,1692	1/1:7,27:34:48.87:1039,49,0	0/0:44,0:44:99:0,105,1242	0/0:27,0:27:69.17:0,69,795	0/0:12,0:12:12.03:0,12,145
chr10	3723091	.	TC	T	1909.48	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.521;DP=677;FS=7.833;HRun=4;HaplotypeScore=64.2774;InbreedingCoeff=0.9967;MQ=93.08;MQ0=0;MQRankSum=-2.554;QD=31.30;ReadPosRankSum=3.371;VQSLOD=4.0809;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,135,1864	0/0:11,0:11:27.09:0,27,378	0/0:33,0:33:90.22:0,90,1198	0/0:28,0:28:69.17:0,69,910	0/0:20,0:20:60.19:0,60,823	0/0:19,0:19:57.19:0,57,798	0/0:25,0:25:75.25:0,75,1037	0/0:36,0:36:93.31:0,93,1303	0/0:14,0:14:39.13:0,39,545	0/0:32,0:32:96.31:0,96,1311	0/0:24,0:24:72.24:0,72,1004	0/0:26,0:26:78.26:0,78,1092	0/0:22,0:22:63.21:0,63,877	0/0:24,0:24:72.21:0,72,985	1/1:0,25:25:69.21:828,69,0	0/0:26,0:26:78.26:0,78,1092	0/0:21,0:21:63.08:0,63,853	1/1:0,13:13:39.12:468,39,0	0/0:27,0:27:75.22:0,75,1002	0/0:15,0:15:45.14:0,45,613	0/0:37,0:37:99:0,105,1436	0/0:23,0:23:66.22:0,66,924	0/0:19,0:19:54.17:0,54,740	0/0:25,0:25:72.24:0,72,1002	1/1:1,22:23:63.19:756,63,0	0/0:29,0:29:87.28:0,87,1202	0/0:28,0:27:78.26:0,78,1081	0/0:6,0:6:18.06:0,18,252
chr10	3723942	.	CGT	C	1203.24	PASS	AB=0.897;AC=16;AF=0.286;AN=56;BaseQRankSum=9.507;DP=940;FS=0.918;HRun=0;HaplotypeScore=139.1062;InbreedingCoeff=-0.0159;MQ=66.52;MQ0=5;MQRankSum=-1.453;QD=2.69;ReadPosRankSum=0.539;VQSLOD=2.4647;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:13,32:46:74.85:837,75,0	0/1:8,3:11:44.85:45,0,285	0/1:28,1:23:6.35:6,0,240	0/0:40,1:34:42.43:0,42,651	0/0:25,0:25:69.24:0,69,1096	0/0:17,2:19:30.10:0,30,465	0/0:40,1:41:60.26:0,60,1393	0/1:40,2:42:2.70:3,0,895	0/1:37,3:40:8.63:9,0,1290	0/0:49,1:50:84.37:0,84,1724	0/0:23,1:24:27.23:0,27,921	0/0:47,3:51:7.38:0,7,1724	0/0:37,2:41:26.84:0,27,1496	0/1:28,3:32:59.51:60,0,1010	0/0:33,0:33:80.53:0,81,1338	0/1:27,4:32:23.70:24,0,1065	1/1:7,0:14:17.04:84,17,0	0/1:32,2:34:3.50:3,0,999	0/1:21,1:21:29.08:29,0,374	0/0:34,0:35:47.24:0,47,1149	0/1:73,9:81:99:134,0,2300	0/0:35,2:37:49.92:0,50,1191	0/0:27,0:27:71.94:0,72,1127	0/0:34,2:36:12.36:0,12,1170	0/1:13,2:15:32.84:33,0,460	0/0:30,1:31:33.31:0,33,1000	0/1:31,4:35:29.62:30,0,1021	0/1:9,3:12:71.48:71,0,351
chr10	3723979	.	ATG	A	2370.37	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.693;DP=1078;FS=8.909;HRun=0;HaplotypeScore=149.8740;InbreedingCoeff=0.9902;MQ=55.17;MQ0=31;MQRankSum=0.050;QD=25.76;ReadPosRankSum=2.944;VQSLOD=4.7861;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:50:93.21:0,93,1430	0/0:10,0:10:24.07:0,24,382	0/0:54,1:9:17.94:0,18,236	0/0:51,0:16:26.65:0,27,347	0/0:25,0:25:63.16:0,63,990	0/0:15,0:15:39.13:0,39,651	0/0:41,0:41:99:0,104,1776	0/0:54,0:48:96.25:0,96,1441	0/0:39,0:39:99:0,102,1693	0/0:53,0:53:99:0,150,2312	0/0:27,0:27:69.14:0,69,1045	0/0:59,0:59:99:0,150,2380	0/0:51,0:51:99:0,140,2148	0/0:38,0:38:99:0,102,1641	0/0:41,0:41:97.29:0,97,1639	0/0:33,0:33:90.31:0,90,1492	0/0:13,0:13:14.98:0,15,154	0/0:35,0:35:80.25:0,80,1421	0/0:31,0:20:44.16:0,44,656	0/0:27,0:27:69.13:0,69,1057	0/0:112,1:112:99:0,280,4350	0/0:32,0:32:77.50:0,78,1187	0/0:26,0:26:68.83:0,69,1035	0/0:39,0:39:89.79:0,90,1471	0/0:26,0:26:67.78:0,68,1098	1/1:7,33:38:95.82:1224,96,0	1/1:5,30:35:63.18:813,63,0	1/1:2,15:17:38.61:476,39,0
chr10	3724127	.	G	GTA	1515.45	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=8.723;DP=1294;FS=13.284;HRun=0;HaplotypeScore=181.4391;InbreedingCoeff=0.9842;MQ=53.02;MQ0=35;MQRankSum=-0.988;QD=30.31;ReadPosRankSum=1.852;VQSLOD=4.1526;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:56:99:0,128,1919	0/0:15,0:15:45:0,45,632	0/0:53,0:6:14.98:0,15,197	0/0:81,0:19:54.03:0,54,763	0/0:31,0:31:87.27:0,87,1307	0/0:22,0:21:54.02:0,54,798	0/0:45,0:44:99:0,117,1741	0/0:66,0:59:99:0,150,2264	0/0:55,0:55:99:0,143,2236	0/0:47,0:45:99:0,123,1713	0/0:30,0:30:87.29:0,87,1315	0/0:63,0:63:99:0,168,2493	0/0:58,0:58:99:0,171,2485	0/0:47,0:47:99:0,136,1975	0/0:58,0:58:99:0,162,2302	0/0:44,0:44:99:0,126,1826	1/1:6,42:48:77.99:1610,78,0	0/0:41,0:41:99:0,114,1626	0/0:35,0:22:63.17:0,63,897	0/0:29,0:29:80.59:0,81,1135	0/0:113,0:106:99:0,265,3837	0/0:32,0:32:90.27:0,90,1329	0/0:28,0:28:81.26:0,81,1215	0/0:77,0:77:99:0,201,2865	0/0:32,0:32:84.21:0,84,1285	0/0:35,0:34:99:0,99,1477	0/0:34,0:34:99:0,99,1483	0/0:17,0:17:48.11:0,48,668
chr10	3724225	.	ATG	A	2297.46	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=10.427;DP=1271;FS=8.576;HRun=0;HaplotypeScore=163.8172;InbreedingCoeff=0.9878;MQ=55.10;MQ0=28;MQRankSum=0.354;QD=25.25;ReadPosRankSum=2.566;VQSLOD=4.5315;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:65,0:65:99:0,149,2589	0/0:21,0:21:60.20:0,60,980	0/0:18,0:7:13.75:0,14,174	0/0:36,0:14:21:0,21,264	0/0:30,0:30:75.23:0,75,1209	0/0:23,0:21:57.14:0,57,867	0/0:54,1:53:99:0,108,2315	0/0:73,0:65:99:0,153,2368	0/0:53,0:53:99:0,114,1870	0/0:68,0:65:99:0,156,2821	0/0:37,0:37:99:0,105,1740	0/0:58,0:58:99:0,160,2608	0/0:51,0:51:99:0,141,2337	0/0:52,0:50:99:0,135,2178	0/0:53,1:54:99:0,129,2094	0/0:38,0:37:99:0,108,1782	0/0:48,2:50:53.14:0,53,1859	0/0:39,0:39:99:0,105,1663	0/0:26,0:18:51.11:0,51,814	0/0:37,0:37:99:0,102,1580	0/0:136,1:134:99:0,312,5045	0/0:35,0:35:86.97:0,87,1432	0/0:28,0:28:75.20:0,75,1163	0/0:64,0:64:99:0,120,2012	0/0:30,0:30:84.29:0,84,1419	1/1:6,44:48:34.63:1521,35,0	1/1:1,22:23:39.12:507,39,0	1/1:3,15:18:17.65:411,18,0
chr10	3724793	.	A	AC	1089.19	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-6.868;DP=620;FS=0.682;HRun=5;HaplotypeScore=73.9960;InbreedingCoeff=0.9983;MQ=79.61;MQ0=0;MQRankSum=-3.358;QD=32.04;ReadPosRankSum=1.447;VQSLOD=4.2845;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,31:34:90.29:1184,90,0	0/0:11,0:11:27.03:0,27,278	0/0:16,0:16:38.64:0,39,408	0/0:16,0:16:38.43:0,38,440	0/0:28,0:28:72.18:0,72,773	0/0:28,0:28:81.20:0,81,870	0/0:21,0:21:57.14:0,57,612	0/0:30,0:30:75.18:0,75,798	0/0:22,0:22:60.13:0,60,635	0/0:20,0:20:51.12:0,51,542	0/0:21,0:20:60.09:0,60,629	0/0:15,0:15:36.09:0,36,387	0/0:19,0:19:57.14:0,57,612	0/0:21,0:21:63.16:0,63,677	0/0:16,0:16:48.11:0,48,508	0/0:18,0:18:45.11:0,45,484	0/0:29,0:29:39.06:0,39,417	0/0:22,0:22:57.14:0,57,612	0/0:23,0:23:60.11:0,60,621	0/0:31,0:31:78.12:0,78,807	0/0:30,0:30:78.17:0,78,829	0/0:23,0:23:66.11:0,66,682	0/0:19,0:19:45.10:0,45,475	0/0:26,0:26:63.28:0,63,728	0/0:18,0:17:48.11:0,48,510	0/0:24,0:24:63.16:0,63,673	0/0:24,0:24:63.15:0,63,666	0/0:15,0:15:33.04:0,33,331
chr10	3725108	.	T	TTGTCTGTC	1586.87	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-3.895;DP=768;FS=0.891;HRun=0;HaplotypeScore=191.9012;InbreedingCoeff=0.9996;MQ=76.43;MQ0=0;MQRankSum=-3.558;QD=46.67;ReadPosRankSum=-4.727;VQSLOD=2.1637;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,135,3342	0/0:14,0:14:33.11:0,33,840	0/0:32,0:31:42.09:0,42,848	0/0:31,0:30:45.32:0,45,1115	0/0:27,0:27:69.21:0,69,1697	0/0:24,0:24:63.19:0,63,1535	0/0:30,0:30:72.23:0,72,1671	1/1:19,15:34:47.97:1682,48,0	0/0:35,0:35:87.29:0,87,2176	0/0:23,0:23:54.17:0,54,1317	0/0:15,0:15:42.14:0,42,1072	0/0:25,0:25:63.21:0,63,1604	0/0:23,0:23:57.20:0,57,1456	0/0:27,0:27:69.23:0,69,1759	0/0:25,0:25:66.22:0,66,1675	0/0:25,0:25:63.21:0,63,1548	0/0:35,0:35:93.32:0,93,2419	0/0:35,0:35:90.25:0,90,2162	0/0:17,0:17:39.12:0,39,941	0/0:27,0:27:66.21:0,66,1572	0/0:35,0:35:78.25:0,78,1952	0/0:32,0:32:84.27:0,84,2072	0/0:22,0:22:54.19:0,54,1419	0/0:25,0:25:66.23:0,66,1664	0/0:22,0:22:63.18:0,63,1518	0/0:26,0:25:72.25:0,72,1861	0/0:28,0:28:78.27:0,78,2043	0/0:23,0:23:54.19:0,54,1352
chr10	3727588	.	ATTGTTGAC	A	1720.61	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.101;DP=781;FS=2.816;HRun=0;HaplotypeScore=194.1851;InbreedingCoeff=0.9984;MQ=79.84;MQ0=0;MQRankSum=-6.575;QD=61.45;ReadPosRankSum=-2.892;VQSLOD=2.9997;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,132,5595	0/0:13,0:13:39.13:0,39,1746	0/0:21,0:20:51.18:0,51,2174	0/0:20,0:20:57.11:0,57,2106	0/0:31,0:31:93.32:0,93,3973	0/0:23,0:23:69.24:0,69,3058	0/0:33,0:33:96.33:0,96,4054	1/1:6,22:28:66.23:1815,66,0	0/0:40,0:40:99:0,120,5298	0/0:43,0:43:99:0,123,5504	0/0:25,0:25:69.24:0,69,3001	0/0:24,0:24:69.24:0,69,3063	0/0:26,0:26:78.27:0,78,3488	0/0:23,0:23:66.23:0,66,2864	0/0:31,0:31:90.30:0,90,3830	0/0:28,0:28:84.29:0,84,3725	0/0:40,0:40:99:0,120,5264	0/0:10,0:10:30.10:0,30,1286	0/0:18,0:18:54.19:0,54,2271	0/0:31,0:31:93.32:0,93,4072	0/0:50,0:50:99:0,151,6564	0/0:31,0:31:93.32:0,93,4070	0/0:26,0:26:75.24:0,75,3074	0/0:29,0:29:87.30:0,87,3820	0/0:23,0:23:69.24:0,69,3046	0/0:26,0:26:72.25:0,72,3156	0/0:28,0:28:84.29:0,84,3731	0/0:13,0:13:27.09:0,27,1184
chr10	3728346	.	AC	A	1342.91	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.621;DP=606;FS=1.361;HRun=2;HaplotypeScore=62.1541;InbreedingCoeff=0.9946;MQ=86.28;MQ0=0;MQRankSum=-2.170;QD=35.34;ReadPosRankSum=2.501;VQSLOD=4.2222;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,117,1690	0/0:8,0:8:21.07:0,21,315	0/0:12,0:12:36.11:0,36,491	0/0:29,0:29:64.74:0,65,1116	0/0:19,0:19:57.19:0,57,854	0/0:19,0:19:57.19:0,57,854	0/0:28,0:28:84.28:0,84,1259	0/0:19,0:19:51.17:0,51,764	0/0:14,0:14:42.14:0,42,628	0/0:19,0:19:57.18:0,57,836	0/0:24,0:24:66.22:0,66,989	0/0:22,0:22:66.22:0,66,989	0/0:13,0:13:39.13:0,39,580	0/0:23,0:23:69.23:0,69,1034	0/0:28,0:28:81.27:0,81,1213	0/0:13,0:13:39.12:0,39,565	1/1:1,37:38:99:1438,111,0	0/0:27,0:27:75.25:0,75,1124	0/0:24,0:24:72.24:0,72,1057	0/0:19,0:19:57.18:0,57,826	0/0:38,0:38:99:0,108,1599	0/0:16,0:16:48.16:0,48,716	0/0:12,0:12:36.12:0,36,540	0/0:29,0:29:84.27:0,84,1236	0/0:15,0:15:45.13:0,45,650	0/0:27,0:27:75.25:0,75,1105	0/0:20,0:20:60.20:0,60,894	0/0:12,0:12:27.09:0,27,404
chr10	3728546	.	A	AT	4153.84	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=0.830;DP=466;FS=1.287;HRun=8;HaplotypeScore=59.3812;InbreedingCoeff=0.9020;MQ=69.61;MQ0=0;MQRankSum=-4.116;QD=25.48;ReadPosRankSum=-1.474;VQSLOD=3.8952;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,19:24:60.14:677,60,0	0/0:16,0:16:41.51:0,42,366	0/0:10,0:12:18.93:0,19,139	0/0:5,1:4:0.89:0,1,52	0/0:24,0:24:66.03:0,66,604	0/0:15,0:15:42.02:0,42,384	0/0:11,0:11:23.98:0,24,214	1/1:11,15:26:32.71:630,33,0	0/0:12,0:12:33.01:0,33,302	0/0:14,0:14:33.01:0,33,302	0/0:14,0:14:38.98:0,39,346	0/0:10,0:10:30.02:0,30,275	0/0:14,0:14:39.02:0,39,357	0/0:16,0:16:45.02:0,45,412	1/1:6,15:21:54.12:599,54,0	0/1:7,0:7:3.53:4,0,144	0/0:27,0:27:66.02:0,66,604	1/1:8,12:20:45.10:505,45,0	0/0:16,0:16:36.01:0,36,329	0/0:22,0:22:63.03:0,63,577	0/0:20,0:20:51.03:0,51,467	0/0:14,0:14:38.98:0,39,350	0/0:17,0:17:45:0,45,407	0/0:23,0:23:54.03:0,54,494	1/1:8,7:15:27.06:294,27,0	1/1:3,24:27:47.75:803,48,0	1/1:1,10:11:30.09:346,30,0	1/1:3,9:12:27.04:296,27,0
chr10	3728575	.	TA	T	3086.90	PASS	AB=0.892;AC=23;AF=0.411;AN=56;BaseQRankSum=11.932;DP=492;FS=7.677;HRun=12;HaplotypeScore=65.8022;InbreedingCoeff=0.6796;MQ=68.08;MQ0=1;MQRankSum=-3.312;QD=11.39;ReadPosRankSum=-0.904;VQSLOD=2.6908;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,19:28:53.70:418,54,0	0/1:14,2:17:1.55:2,0,334	0/1:10,0:10:0.12:0,0,64	0/0:7,0:5:4.82:0,5,31	0/1:24,3:27:3.57:4,0,512	0/0:20,0:21:50.94:0,51,502	0/0:12,0:13:29.89:0,30,288	1/1:8,16:25:52.80:401,53,0	0/0:11,1:12:6.82:0,7,251	0/0:8,0:8:15.03:0,15,152	0/0:22,1:23:30.86:0,31,489	0/0:10,0:10:27.05:0,27,274	0/0:15,3:18:15.84:0,16,342	0/0:13,1:14:12.83:0,13,312	1/1:6,16:22:52.81:400,53,0	0/1:8,2:10:16.42:16,0,214	1/1:4,24:31:71.84:529,72,0	1/1:3,13:17:40.88:308,41,0	0/1:11,3:15:27.78:28,0,277	0/0:24,0:25:59.92:0,60,575	0/0:20,2:22:33.88:0,34,525	0/0:17,0:17:36.03:0,36,355	0/0:13,0:13:36.07:0,36,364	0/0:16,2:18:24.86:0,25,433	1/1:1,19:20:47.81:371,48,0	1/1:11,11:22:38.78:302,39,0	1/1:3,11:15:37.88:282,38,0	1/1:0,12:12:29.89:232,30,0
chr10	3729365	.	CATAT	C	362.90	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.788;DP=674;FS=0.000;HRun=0;HaplotypeScore=133.4336;InbreedingCoeff=0.8989;MQ=65.59;MQ0=1;MQRankSum=-3.231;QD=18.14;ReadPosRankSum=-1.603;VQSLOD=3.1730;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:73.12:0,73,1703	0/0:7,0:8:20.86:0,21,469	0/0:19,0:15:24.88:0,25,415	0/0:8,0:5:6.02:0,6,88	0/0:36,0:36:93.30:0,93,2174	0/0:31,0:31:72.37:0,72,1351	0/0:23,0:23:60.15:0,60,1055	0/0:30,0:30:72.24:0,72,1682	0/0:22,0:22:66.21:0,66,1555	0/0:26,0:26:69.18:0,69,1401	0/0:34,0:34:93.29:0,93,2163	0/0:20,0:20:57.20:0,57,1407	0/0:34,0:35:93.11:0,93,2180	0/0:19,0:19:48.15:0,48,1116	0/0:32,0:32:75.24:0,75,1425	0/0:26,0:26:60.21:0,60,1439	1/1:9,11:20:30.10:457,30,0	0/0:22,0:22:48.16:0,48,935	0/0:12,0:13:29.89:0,30,656	0/0:24,0:24:60.15:0,60,1399	0/0:12,0:12:33.07:0,33,732	0/0:18,0:19:50.96:0,51,1207	0/0:27,0:27:72.25:0,72,1734	0/0:11,0:11:30.10:0,30,761	0/0:28,0:28:54.19:0,54,1057	0/0:32,0:32:81.19:0,81,1504	0/0:29,0:29:61.73:0,62,1106	0/0:36,0:36:78.22:0,78,1423
chr10	3729377	.	T	TAG	5025.73	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=-10.038;DP=712;FS=18.614;HRun=0;HaplotypeScore=96.5823;InbreedingCoeff=0.7926;MQ=61.77;MQ0=2;MQRankSum=1.800;QD=23.59;ReadPosRankSum=3.244;VQSLOD=4.2229;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:62.19:0,62,734	0/0:9,0:9:24.01:0,24,260	0/0:25,0:15:15.62:0,16,208	0/0:9,0:3:2.94:0,3,18	0/0:34,0:34:84.19:0,84,996	0/0:28,0:28:0.23:0,0,221	0/1:30,0:30:99:179,0,141	0/0:32,0:32:78.10:0,78,862	0/0:24,0:24:63.15:0,63,758	0/0:28,0:28:55:0,55,698	0/0:36,0:36:96.20:0,96,1114	0/0:24,0:24:69.14:0,69,796	0/0:36,0:36:77.81:0,78,947	0/0:19,0:19:51.11:0,51,592	1/1:3,34:37:63.22:1054,63,0	0/0:27,0:27:66.11:0,66,731	0/0:21,0:21:18.72:0,19,91	1/1:3,19:22:27.51:732,28,0	0/0:13,0:13:24.02:0,24,261	0/0:30,0:30:78.09:0,78,841	0/0:15,0:15:39.01:0,39,407	0/0:19,0:19:54.11:0,54,643	0/0:30,0:30:75.15:0,75,882	0/0:11,0:11:30.04:0,30,349	1/1:5,20:25:39.13:652,39,0	1/1:10,21:31:4.39:901,4,0	1/1:8,24:32:48.37:755,48,0	1/1:9,27:36:45.15:752,45,0
chr10	3729386	.	AGAAAGT	A	347.74	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.221;DP=706;FS=4.987;HRun=0;HaplotypeScore=161.8338;InbreedingCoeff=0.9346;MQ=61.06;MQ0=4;MQRankSum=-4.124;QD=18.30;ReadPosRankSum=0.650;VQSLOD=2.6504;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:77.43:0,77,2314	0/0:11,0:11:30.10:0,30,895	0/0:31,0:16:36.94:0,37,591	0/0:12,0:4:8.62:0,9,176	0/0:30,0:30:87.30:0,87,3001	0/0:27,0:27:81.23:0,81,2329	0/0:33,0:33:96.33:0,96,2922	0/0:37,0:37:99:0,111,2717	0/0:23,0:23:69.24:0,69,2331	0/0:27,0:27:81.28:0,81,2677	0/0:36,0:36:99:0,105,3305	0/0:27,0:27:71.18:0,71,2670	0/0:35,0:35:99:0,100,3110	0/0:20,0:20:60.21:0,60,1944	0/0:36,0:36:69.24:0,69,1876	0/0:25,0:25:75.26:0,75,2349	1/1:9,10:19:19.88:439,20,0	0/0:23,0:23:54.19:0,54,1373	0/0:16,0:16:45.15:0,45,1289	0/0:29,0:29:84.27:0,84,2855	0/0:17,0:17:51.18:0,51,1661	0/0:21,0:21:63.21:0,63,2003	0/0:28,0:28:81.28:0,81,2722	0/0:11,0:11:33.11:0,33,1059	0/0:21,0:21:39.13:0,39,1114	0/0:25,0:25:75.26:0,75,2062	0/0:29,0:29:40.48:0,40,1225	0/0:28,0:28:48.16:0,48,1391
chr10	3729388	.	AAAGT	A	220.48	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.552;DP=709;FS=2.730;HRun=0;HaplotypeScore=136.0543;InbreedingCoeff=0.9328;MQ=60.78;MQ0=4;MQRankSum=-3.401;QD=12.25;ReadPosRankSum=-0.123;VQSLOD=3.3455;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:76.87:0,77,1767	0/0:10,0:10:29.97:0,30,686	0/0:31,0:16:25.94:0,26,472	0/0:14,0:3:8.82:0,9,151	0/0:32,0:32:93.28:0,93,2439	0/0:26,0:26:73.99:0,74,1729	0/0:32,0:32:95.99:0,96,2203	0/0:37,0:37:99:0,109,2147	0/0:23,0:23:69.24:0,69,1826	0/0:27,0:27:81.27:0,81,2060	0/0:34,0:34:99:0,102,2526	0/0:27,0:27:71.18:0,71,2086	0/0:36,0:36:99:0,99,2497	0/0:21,0:21:63.18:0,63,1570	0/0:37,0:37:75.25:0,75,1431	0/0:26,0:26:78.22:0,78,1895	1/1:11,7:18:18.06:311,18,0	0/0:22,0:23:54.16:0,54,942	0/0:16,0:16:45.15:0,45,993	0/0:27,0:27:81.28:0,81,2252	0/0:21,0:21:60.10:0,60,1484	0/0:22,0:22:66.22:0,66,1631	0/0:29,0:29:84.29:0,84,2170	0/0:11,0:11:33.11:0,33,834	0/0:19,0:19:39.13:0,39,776	0/0:25,0:25:74.81:0,75,1432	0/0:29,0:30:32.56:0,33,861	0/0:28,0:28:48.16:0,48,981
chr10	3729390	.	AGT	A	63.30	PASS	AB=0.957;AC=5;AF=0.089;AN=56;BaseQRankSum=4.805;DP=738;FS=0.800;HRun=0;HaplotypeScore=111.5282;InbreedingCoeff=0.3409;MQ=60.02;MQ0=7;MQRankSum=-1.406;QD=0.60;ReadPosRankSum=0.253;VQSLOD=1.9828;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:60.05:0,60,968	0/0:10,0:10:24.08:0,24,386	0/0:38,0:17:18.32:0,18,232	0/0:21,0:3:9.03:0,9,138	0/0:33,1:34:53.60:0,54,1317	0/1:25,1:26:1.36:1,0,800	0/1:29,2:31:34.60:35,0,995	0/0:38,0:38:87.28:0,87,1357	0/0:24,0:24:60.19:0,60,949	0/0:28,0:28:69.24:0,69,1116	0/0:32,2:34:13.95:0,14,1232	0/0:27,1:28:38.58:0,39,1117	0/0:35,0:35:87.30:0,87,1398	0/0:21,1:22:23.53:0,24,881	0/0:36,0:36:75.26:0,75,1209	0/0:25,1:26:32.57:0,33,1031	1/1:18,0:18:17.81:124,18,0	0/0:25,0:25:48.12:0,48,737	0/0:15,0:15:33.11:0,33,533	0/0:28,0:28:81.28:0,81,1310	0/0:22,0:22:26.63:0,27,928	0/0:23,0:23:60.20:0,60,966	0/0:30,0:30:72.24:0,72,1144	0/0:11,0:11:27.09:0,27,438	0/0:19,0:19:5.65:0,6,593	0/0:27,0:27:50.38:0,50,1030	0/1:30,1:31:16.61:17,0,707	0/0:28,0:28:48.16:0,48,774
chr10	3730466	.	AG	A	836.25	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.431;DP=515;FS=2.640;HRun=2;HaplotypeScore=54.3283;InbreedingCoeff=0.8831;MQ=77.48;MQ0=0;MQRankSum=-1.198;QD=33.45;ReadPosRankSum=-1.392;VQSLOD=3.0773;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:66.20:0,66,966	0/0:8,0:8:24.08:0,24,360	0/0:7,0:7:19.82:0,20,239	0/0:15,0:15:26.27:0,26,488	0/0:9,0:9:24.07:0,24,335	0/0:13,0:13:39.11:0,39,560	0/0:28,0:28:84.27:0,84,1238	0/0:25,0:25:72.22:0,72,1023	0/0:23,0:23:66.21:0,66,965	0/0:17,0:17:48.13:0,48,695	0/0:11,0:11:33.10:0,33,468	0/0:21,0:21:60.20:0,60,899	0/0:20,0:20:57.19:0,57,853	0/0:26,0:26:78.25:0,78,1149	0/0:18,0:18:54.18:0,54,809	0/0:21,0:21:63.20:0,63,924	1/1:0,25:25:72.23:931,72,0	0/0:21,0:21:63.21:0,63,944	0/0:24,0:24:69.22:0,69,1013	0/0:5,0:5:15.05:0,15,225	0/0:50,0:50:99:0,150,2204	0/0:10,0:10:30.10:0,30,448	0/0:13,0:13:39.13:0,39,567	0/0:37,0:37:99:0,108,1619	0/0:18,0:18:51.14:0,51,722	0/0:12,0:12:36.12:0,36,535	0/0:14,0:14:42.14:0,42,624	0/0:2,0:2:6.02:0,6,90
chr10	3731446	.	AT	A	828.15	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.568;DP=682;FS=2.844;HRun=2;HaplotypeScore=67.5746;InbreedingCoeff=0.9998;MQ=79.86;MQ0=0;MQRankSum=-1.879;QD=36.01;ReadPosRankSum=2.228;VQSLOD=4.4049;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,129,2038	0/0:14,0:13:39.13:0,39,616	0/0:28,0:28:74.84:0,75,1154	0/0:34,0:34:99:0,99,1503	0/0:26,0:26:75.26:0,75,1199	0/0:24,0:24:69.22:0,69,1066	0/0:19,0:19:54.18:0,54,856	0/0:28,0:28:84.29:0,84,1320	0/0:25,0:25:72.23:0,72,1127	0/0:26,0:26:78.27:0,78,1248	0/0:14,0:14:42.14:0,42,671	0/0:27,0:27:81.26:0,81,1269	0/0:26,0:26:78.27:0,78,1237	0/0:19,0:19:57.19:0,57,901	0/0:20,0:20:60.20:0,60,957	0/0:26,0:26:78.25:0,78,1204	1/1:0,23:23:66.22:923,66,0	0/0:35,0:35:99:0,105,1679	0/0:16,0:16:48.16:0,48,759	0/0:22,0:22:66.21:0,66,1030	0/0:38,0:38:99:0,111,1704	0/0:21,0:21:60.20:0,60,942	0/0:23,0:23:69.24:0,69,1096	0/0:25,0:25:72.23:0,72,1127	0/0:24,0:24:72.25:0,72,1149	0/0:28,0:28:84.28:0,84,1321	0/0:15,0:15:42.14:0,42,671	0/0:13,0:13:39.13:0,39,623
chr10	3732058	.	G	GC	661.31	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.233;DP=703;FS=0.000;HRun=3;HaplotypeScore=70.0664;InbreedingCoeff=0.9825;MQ=75.95;MQ0=0;MQRankSum=-0.741;QD=28.75;ReadPosRankSum=1.878;VQSLOD=2.9611;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:60,0:60:99:0,175,2074	0/0:9,0:9:24.07:0,24,288	0/0:22,1:22:57.14:0,57,657	0/0:22,0:22:44.18:0,44,591	0/0:21,0:21:57.17:0,57,684	0/0:24,0:24:69.21:0,69,828	0/0:31,0:31:87.22:0,87,1017	0/0:36,0:36:99:0,99,1180	0/0:24,0:24:72.19:0,72,840	0/0:32,0:32:89.95:0,90,1080	0/0:19,0:19:57.17:0,57,684	0/0:28,0:28:84.23:0,84,985	0/0:23,0:23:66.20:0,66,792	0/0:24,0:24:72.22:0,72,864	0/0:23,0:23:69.21:0,69,828	0/0:19,0:19:51.16:0,51,612	1/1:1,22:23:54.18:756,54,0	0/0:24,0:24:72.19:0,72,850	0/0:19,0:19:57.17:0,57,684	0/0:16,0:16:45.14:0,45,540	0/0:39,0:39:99:0,108,1296	0/0:22,0:22:63.18:0,63,744	0/0:17,0:17:48.12:0,48,550	0/0:28,0:28:84.26:0,84,1008	0/0:27,0:27:75.20:0,75,876	0/0:41,0:41:99:0,112,1314	0/0:24,0:24:69.21:0,69,827	0/0:5,0:5:15.05:0,15,180
chr10	3733099	.	C	CTAGG	972.16	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=1.077;DP=600;FS=0.000;HRun=0;HaplotypeScore=104.8631;InbreedingCoeff=0.9951;MQ=93.16;MQ0=0;MQRankSum=-3.982;QD=51.17;ReadPosRankSum=0.638;VQSLOD=4.6202;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:87.30:0,87,1677	0/0:11,0:11:30.10:0,30,580	0/0:30,0:30:81.10:0,81,1533	0/0:22,0:22:60.21:0,60,1111	0/0:22,0:22:63.22:0,63,1219	0/0:19,0:19:51.17:0,51,989	0/0:20,0:20:60.19:0,60,1118	0/0:23,0:23:69.24:0,69,1331	0/0:26,0:26:78.27:0,78,1501	0/0:28,0:28:81.28:0,81,1570	0/0:15,0:15:36.12:0,36,698	0/0:22,0:22:63.22:0,63,1219	0/0:14,0:14:42.14:0,42,814	0/0:23,0:23:69.24:0,69,1338	0/0:31,0:31:93.31:0,93,1761	0/0:24,0:24:69.24:0,69,1337	1/1:3,16:19:39.13:1067,39,0	0/0:22,0:22:60.21:0,60,1151	0/0:21,0:21:57.20:0,57,1087	0/0:20,0:20:57.18:0,57,1070	0/0:19,0:19:54.19:0,54,1047	0/0:23,0:23:69.24:0,69,1337	0/0:13,0:13:36.12:0,36,689	0/0:28,0:28:84.26:0,84,1536	0/0:15,0:15:45.15:0,45,861	0/0:30,0:30:84.29:0,84,1628	0/0:24,0:24:66.23:0,66,1270	0/0:7,0:7:21.07:0,21,407
chr10	3733153	.	AC	A	3011.27	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.136;DP=602;FS=2.598;HRun=2;HaplotypeScore=59.4206;InbreedingCoeff=0.9983;MQ=76.89;MQ0=0;MQRankSum=-0.528;QD=35.85;ReadPosRankSum=1.444;VQSLOD=4.1753;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,114,1644	0/0:12,0:12:36.12:0,36,539	0/0:9,0:9:21.05:0,21,280	0/0:16,0:16:39.05:0,39,517	0/0:31,0:31:90.26:0,90,1276	0/0:28,0:28:81.23:0,81,1165	0/0:28,0:28:84.26:0,84,1217	0/0:20,0:20:60.20:0,60,898	0/0:21,0:21:63.20:0,63,924	0/0:24,0:24:72.23:0,72,1041	0/0:14,0:14:42.14:0,42,626	0/0:22,0:22:66.22:0,66,982	0/0:20,0:20:60.20:0,60,898	0/0:16,0:16:48.16:0,48,717	1/1:0,27:27:78.25:1012,78,0	0/0:15,0:15:45.15:0,45,674	0/0:25,0:25:63.21:0,63,943	1/1:0,30:30:84.27:1090,84,0	0/0:14,0:14:42.13:0,42,604	0/0:16,0:16:48.16:0,48,716	0/0:19,0:19:57.19:0,57,851	0/0:23,0:23:69.22:0,69,1013	0/0:15,0:15:45.14:0,45,640	0/0:29,0:29:81.27:0,81,1211	1/1:0,27:27:81.26:1052,81,0	0/0:27,0:27:81.18:0,81,1163	0/0:25,0:25:75.25:0,75,1120	0/0:11,0:11:33.11:0,33,493
chr10	3733826	.	TCTGCCCTTCCCTCACACCTGCC	T	7217.75	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=10.916;DP=603;FS=0.520;HRun=0;HaplotypeScore=327.8016;InbreedingCoeff=0.9987;MQ=78.02;MQ0=0;MQRankSum=-8.990;QD=80.20;ReadPosRankSum=-0.095;VQSLOD=3.4001;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,27:27:36.12:2043,36,0	0/0:13,0:13:36.11:0,36,3157	0/0:16,0:16:48.16:0,48,3074	0/0:23,0:23:63.69:0,64,4163	0/0:14,0:14:42.14:0,42,3578	0/0:13,0:13:39.12:0,39,3241	0/0:26,0:26:75.19:0,75,5838	1/1:2,15:17:44.88:658,45,0	0/0:25,0:25:72.22:0,72,6197	0/0:16,0:16:48.15:0,48,3617	0/0:17,0:17:51.18:0,51,5066	0/0:24,0:24:72.23:0,72,6572	0/0:36,0:36:99:0,99,8193	0/0:26,0:26:75.24:0,75,5924	1/1:1,20:21:36.12:2184,36,0	0/0:28,0:28:78.24:0,78,6946	0/0:28,0:28:84.27:0,84,7611	1/1:0,15:15:21.07:1287,21,0	0/0:18,0:18:48.14:0,48,2837	0/0:14,0:14:42.14:0,42,3947	0/0:45,0:45:99:0,132,11300	0/0:23,0:23:60.21:0,60,4926	0/0:20,0:20:60.17:0,60,4830	0/0:31,0:31:84.27:0,84,7116	1/1:6,4:10:26.97:1045,27,0	0/0:15,0:15:42.14:0,42,3546	0/0:24,0:24:69.22:0,69,6515	0/0:18,0:18:54.17:0,54,4687
chr10	3734130	.	CGT	C	705.01	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=0.466;DP=975;FS=0.650;HRun=0;HaplotypeScore=135.2102;InbreedingCoeff=0.9144;MQ=56.55;MQ0=10;MQRankSum=0.675;QD=21.36;ReadPosRankSum=-3.859;VQSLOD=2.9681;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:56.15:0,56,1401	0/0:17,0:17:45.15:0,45,738	0/0:65,0:14:17.95:0,18,206	0/0:59,0:16:24.05:0,24,289	0/0:16,0:16:42.12:0,42,639	0/0:19,0:19:48.15:0,48,761	0/0:35,1:36:37.73:0,38,1112	1/1:20,13:33:69.17:800,69,0	0/0:40,3:43:7.86:0,8,1652	0/0:43,0:43:35.11:0,35,1342	0/0:17,0:17:48.16:0,48,781	0/0:44,1:45:82.79:0,83,1745	0/0:30,0:30:75.23:0,75,1175	0/0:29,0:29:72.22:0,72,1111	0/0:52,0:52:99:0,111,1694	0/0:29,0:29:78.27:0,78,1281	0/0:9,0:21:17.68:0,18,142	0/0:19,0:19:51.17:0,51,835	0/0:19,0:20:30.97:0,31,601	0/0:26,0:26:51.12:0,51,786	0/0:90,0:90:99:0,203,3580	0/0:25,0:25:57.15:0,57,882	0/0:29,0:29:40.98:0,41,1154	0/0:57,0:57:99:0,126,1969	0/0:23,0:21:41.87:0,42,677	0/0:38,0:36:81.12:0,81,1252	0/0:27,0:26:51.16:0,51,823	0/0:21,0:17:33.10:0,33,520
chr10	3734157	.	GCA	G	83.99	PASS	AB=0.865;AC=3;AF=0.054;AN=56;BaseQRankSum=6.139;DP=1177;FS=0.000;HRun=0;HaplotypeScore=160.8526;InbreedingCoeff=-0.0564;MQ=51.98;MQ0=44;MQRankSum=-4.252;QD=0.33;ReadPosRankSum=-3.377;VQSLOD=1.5610;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:48:99:0,108,1959	0/0:19,0:19:51.16:0,51,926	0/1:113,10:12:45.25:45,0,334	0/1:103,12:17:98.90:99,0,300	0/0:19,0:19:54.19:0,54,1037	0/0:21,0:22:35.75:0,36,1150	0/0:41,0:41:99:0,114,2129	0/0:42,1:43:82.06:0,82,2089	0/0:50,0:50:99:0,141,2715	0/0:49,0:49:99:0,141,2672	0/0:19,0:19:57.20:0,57,1111	0/0:48,1:49:99:0,136,2635	0/0:40,0:40:99:0,111,2164	0/0:29,0:29:81.28:0,81,1560	0/0:48,0:48:99:0,108,2024	0/0:28,0:28:84.28:0,84,1583	0/1:9,4:13:34.62:40,0,35	0/0:23,0:23:24.16:0,24,1146	0/0:29,0:27:81.28:0,81,1521	0/0:24,0:24:63.19:0,63,1208	0/0:116,0:113:99:0,305,5767	0/0:26,0:26:69.21:0,69,1305	0/0:33,0:33:68.98:0,69,1755	0/0:53,2:55:99:0,135,2553	0/0:23,0:21:44.81:0,45,883	0/0:40,0:36:99:0,105,2021	0/0:29,0:28:57.18:0,57,1020	0/0:23,0:20:48.14:0,48,868
chr10	3734159	.	A	ATG	50.05	PASS	AB=0.982;AC=4;AF=0.071;AN=56;BaseQRankSum=5.227;DP=1193;FS=5.001;HRun=0;HaplotypeScore=170.1320;InbreedingCoeff=0.2763;MQ=51.19;MQ0=47;MQRankSum=-4.211;QD=0.31;ReadPosRankSum=-0.428;VQSLOD=2.6362;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:90.10:0,90,1144	0/0:19,0:19:36.05:0,36,449	0/0:122,0:11:15.89:0,16,182	0/1:119,0:18:18.44:18,0,175	0/0:19,0:19:45.14:0,45,579	0/0:23,0:23:51.54:0,52,691	0/0:44,0:44:99:0,99,1274	0/0:43,0:43:92.42:0,92,1183	0/0:51,0:51:99:0,126,1605	0/0:49,0:49:99:0,114,1466	0/0:20,0:20:48.15:0,48,617	0/0:46,0:46:99:0,117,1475	0/0:40,0:40:99:0,108,1389	0/0:29,0:29:72.22:0,72,912	0/0:47,0:47:93.27:0,93,1188	0/0:28,1:29:24.78:0,25,862	1/1:13,3:16:1.40:102,1,0	0/1:26,1:27:30.36:30,0,654	0/0:29,0:27:66.21:0,66,849	0/0:24,0:24:60.09:0,60,767	0/0:116,0:113:99:0,277,3527	0/0:24,0:24:60.19:0,60,772	0/0:32,0:33:72.23:0,72,926	0/0:57,0:56:99:0,105,1351	0/0:23,0:21:33.04:0,33,424	0/0:41,0:37:87.28:0,87,1119	0/0:29,0:28:48.11:0,48,617	0/0:24,0:21:48.16:0,48,616
chr10	3734183	.	ATG	A	3073.69	PASS	AB=0.587;AC=7;AF=0.125;AN=56;BaseQRankSum=9.814;DP=1227;FS=8.223;HRun=0;HaplotypeScore=163.3847;InbreedingCoeff=0.8129;MQ=52.13;MQ0=47;MQRankSum=0.497;QD=21.65;ReadPosRankSum=1.971;VQSLOD=4.0904;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,40:48:84.14:1081,84,0	0/0:19,0:19:47.95:0,48,792	0/0:111,0:12:14.62:0,15,169	0/0:126,0:21:22.23:0,22,627	0/0:21,0:21:57.19:0,57,948	0/0:27,0:28:71.39:0,71,1186	0/0:56,0:56:99:0,118,2084	0/0:46,0:45:84.24:0,84,1372	0/0:50,0:50:99:0,126,2043	0/0:49,0:49:99:0,122,1995	0/0:20,0:20:14.24:0,14,765	0/0:42,0:42:99:0,111,1841	0/0:45,0:45:99:0,119,1971	0/0:28,0:28:69.24:0,69,1152	0/0:49,0:49:72.23:0,72,1177	0/0:29,0:29:81.27:0,81,1328	0/0:13,0:14:8.91:0,9,199	0/0:27,1:28:24.20:0,24,881	0/0:17,0:17:36.12:0,36,600	0/0:27,0:27:63.19:0,63,1048	0/0:139,1:135:99:0,301,5526	0/0:28,0:28:72.22:0,72,1209	0/0:27,0:27:78.25:0,78,1289	0/0:62,0:61:99:0,135,2264	0/0:21,0:20:32.84:0,33,556	0/1:11,26:34:17.06:900,0,17	1/1:7,29:34:63.18:809,63,0	1/1:3,18:18:32.44:432,32,0
chr10	3734297	.	C	CTG	5725.03	PASS	AB=0.840;AC=18;AF=0.321;AN=56;BaseQRankSum=3.005;DP=1222;FS=16.804;HRun=0;HaplotypeScore=174.7655;InbreedingCoeff=0.7855;MQ=54.43;MQ0=42;MQRankSum=-3.651;QD=15.27;ReadPosRankSum=-1.431;VQSLOD=3.0403;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:28,22:47:62.41:974,62,0	0/0:13,0:13:34.11:0,34,376	0/0:76,0:14:27:0,27,288	0/1:88,0:24:26.83:27,0,128	0/0:21,0:21:51.15:0,51,631	0/0:28,0:28:54.16:0,54,668	0/0:49,0:49:99:0,110,1356	0/1:31,27:54:85.16:918,0,85	0/0:62,0:62:99:0,144,1813	0/0:50,0:50:99:0,124,1604	0/0:15,0:15:26.98:0,27,293	0/0:49,0:49:99:0,123,1526	0/0:51,0:51:99:0,120,1450	0/0:50,0:50:99:0,111,1342	1/1:22,31:49:51.16:846,51,0	0/0:41,0:41:99:0,99,1235	1/1:3,0:3:2.98:22,3,0	1/1:13,8:22:47.57:633,48,0	0/0:26,0:22:60.18:0,60,735	0/0:24,0:23:60.19:0,60,749	0/0:150,0:147:99:0,307,3779	0/0:46,0:46:99:0,114,1410	0/0:24,0:25:50.98:0,51,594	0/0:70,0:70:99:0,165,2040	1/1:5,11:16:36.12:591,36,0	1/1:42,0:38:61.42:1054,61,0	1/1:16,0:15:33.10:398,33,0	1/1:13,0:13:5.06:263,5,0
chr10	3734302	.	T	TGG	4606.39	PASS	AB=0.931;AC=12;AF=0.214;AN=56;BaseQRankSum=7.283;DP=1240;FS=17.186;HRun=1;HaplotypeScore=179.6811;InbreedingCoeff=0.3997;MQ=54.16;MQ0=43;MQRankSum=-3.145;QD=12.38;ReadPosRankSum=1.498;VQSLOD=0.3869;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:51,0:48:6.36:420,0,6	0/0:13,0:13:38.79:0,39,516	0/0:81,0:14:32.11:0,32,456	0/1:90,0:22:21.98:22,0,209	0/0:19,0:19:54.16:0,54,802	0/0:30,0:30:72.15:0,72,971	0/0:50,0:50:99:0,125,1812	0/1:64,0:51:99:349,0,420	0/0:65,0:65:99:0,168,2397	0/0:50,0:50:99:0,147,2115	0/0:14,0:14:39.08:0,39,501	0/0:50,0:50:99:0,141,2023	0/0:55,0:55:99:0,156,2114	0/0:48,0:48:99:0,132,1860	0/1:52,0:46:9.81:384,0,10	0/0:42,0:42:99:0,111,1607	0/0:2,0:2:0.89:0,1,2	0/1:22,0:21:39.19:246,0,39	0/0:28,0:24:72.19:0,72,1019	0/0:24,0:23:66.20:0,66,967	0/0:149,0:146:99:0,379,5236	0/0:47,0:47:99:0,132,1887	0/0:27,0:27:69.05:0,69,893	0/0:74,0:74:99:0,198,2772	1/1:19,0:18:35.91:287,36,0	1/1:10,32:37:56.38:1813,56,0	1/1:7,11:16:33.11:630,33,0	0/1:4,10:14:19.41:455,0,19
chr10	3734341	.	C	CTG	319.46	PASS	AB=0.852;AC=6;AF=0.107;AN=56;BaseQRankSum=8.387;DP=1212;FS=3.515;HRun=0;HaplotypeScore=208.0273;InbreedingCoeff=-0.1140;MQ=55.88;MQ0=37;MQRankSum=-6.970;QD=1.75;ReadPosRankSum=-5.901;VQSLOD=1.0866;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:33,3:36:22.43:22,0,124	0/0:12,0:12:27.56:0,28,354	0/0:66,0:14:27.07:0,27,376	0/0:87,0:31:38.62:0,39,439	0/0:22,0:22:60.17:0,60,755	0/0:28,0:28:63.18:0,63,793	0/0:53,0:53:99:0,114,1609	0/0:63,2:43:21.64:0,22,785	0/0:72,0:72:99:0,172,2203	0/0:60,0:60:99:0,133,1788	0/0:13,0:13:30.09:0,30,391	0/0:50,0:50:99:0,123,1526	0/0:55,0:55:99:0,129,1608	0/0:46,0:46:99:0,111,1416	0/1:40,11:45:57.79:58,0,191	0/0:51,0:51:99:0,123,1578	0/0:6,0:6:9.03:0,9,118	0/1:11,5:13:99:197,0,114	0/0:29,0:26:57.18:0,57,749	0/0:27,0:26:71.97:0,72,918	0/0:135,2:135:99:0,322,4162	0/0:43,0:43:99:0,104,1358	0/0:27,0:27:66.15:0,66,840	0/0:69,0:69:99:0,168,2157	0/1:21,3:22:1.83:2,0,205	0/1:38,0:38:44.42:44,0,899	0/1:11,0:16:99:114,0,260	0/0:10,0:10:20.55:0,21,246
chr10	3734353	.	C	CTG	585.21	PASS	AB=0.736;AC=5;AF=0.089;AN=56;BaseQRankSum=4.002;DP=1185;FS=14.506;HRun=0;HaplotypeScore=212.1170;InbreedingCoeff=-0.1042;MQ=55.93;MQ0=36;MQRankSum=-4.019;QD=3.29;ReadPosRankSum=-1.438;VQSLOD=0.8747;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:7,18:29:32.73:41,0,33	0/0:10,0:10:20.61:0,21,237	0/0:66,0:14:3.10:0,3,156	0/0:79,0:28:20.45:0,20,237	0/0:19,0:19:45.14:0,45,558	0/0:27,0:27:54.17:0,54,676	0/0:54,0:54:99:0,113,1535	0/1:31,17:34:99:435,0,220	0/0:71,0:71:99:0,163,2087	0/0:56,0:57:99:0,120,1463	0/0:14,0:14:30.10:0,30,376	0/0:48,0:48:99:0,114,1417	0/0:55,0:55:99:0,120,1557	0/0:44,0:44:99:0,99,1203	0/1:24,12:46:32.60:33,0,75	0/0:52,0:52:99:0,114,1398	0/0:5,0:6:9.03:0,9,113	0/1:9,6:15:51.77:178,0,52	0/0:27,0:23:45.26:0,45,497	0/0:32,0:31:75.22:0,75,919	0/0:136,0:135:99:0,276,3386	0/0:43,0:43:90.26:0,90,1105	0/0:30,0:30:75.20:0,75,903	0/0:72,0:72:99:0,171,2104	0/1:11,9:24:14.74:15,0,17	0/0:14,0:34:57.83:0,58,359	0/0:3,0:15:7.92:0,8,54	0/0:5,0:10:11.53:0,12,79
chr10	3734365	.	GACTC	G	55.02	PASS	AB=0.944;AC=5;AF=0.089;AN=56;BaseQRankSum=6.804;DP=1119;FS=0.000;HRun=0;HaplotypeScore=230.4672;InbreedingCoeff=0.1992;MQ=55.43;MQ0=34;MQRankSum=-4.150;QD=0.59;ReadPosRankSum=-0.124;VQSLOD=2.5504;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:14.93:0,15,264	0/0:11,0:11:26.17:0,26,586	0/0:65,1:12:12.57:0,13,353	0/0:65,1:25:22.71:0,23,410	0/0:21,0:21:54.18:0,54,1321	0/0:26,0:26:62.02:0,62,1567	0/0:51,0:51:99:0,124,3565	0/0:46,0:33:87.31:0,87,1526	0/0:67,0:67:99:0,176,4665	0/0:50,0:50:99:0,144,3727	0/0:13,0:13:33.11:0,33,909	0/0:49,0:49:99:0,136,3567	0/0:53,0:53:99:0,129,3712	0/0:37,1:38:99:0,105,2790	0/0:44,0:42:29.79:0,30,576	0/0:47,0:47:99:0,126,3385	0/0:6,0:6:10.59:0,11,222	0/1:15,1:16:36.09:36,0,510	0/0:24,0:20:0.52:0,1,1340	0/0:30,0:29:81.28:0,81,2049	0/0:126,2:127:99:0,314,8320	0/0:39,0:39:99:0,99,2554	0/0:33,0:33:90.27:0,90,2192	0/0:72,0:73:99:0,186,4828	0/1:27,0:26:23.66:24,0,229	0/1:35,0:32:30:30,0,365	1/1:13,0:12:6.11:79,6,0	0/0:9,0:9:4.19:0,4,70
chr10	3734369	.	CTG	C	377.95	PASS	AB=0.793;AC=4;AF=0.071;AN=56;BaseQRankSum=6.300;DP=1143;FS=9.482;HRun=0;HaplotypeScore=199.1480;InbreedingCoeff=-0.0824;MQ=54.92;MQ0=35;MQRankSum=-3.655;QD=5.73;ReadPosRankSum=0.220;VQSLOD=1.8433;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:9.03:0,9,140	0/1:9,1:10:18.56:19,0,225	0/0:63,0:10:12.15:0,12,115	0/0:67,0:23:18.44:0,18,186	0/0:21,0:21:21.26:0,21,578	0/0:26,1:28:13.73:0,14,675	0/0:49,2:51:59.31:0,59,1396	0/0:49,0:39:63.03:0,63,900	0/0:68,3:71:49.34:0,49,2063	0/0:49,0:49:99:0,105,1525	0/0:14,0:14:33.10:0,33,507	0/0:50,1:51:41.08:0,41,1546	0/0:51,1:52:81.57:0,82,1707	0/0:42,1:43:93.19:0,93,1350	0/0:42,0:41:24.07:0,24,374	0/0:44,3:47:68.62:0,69,1434	0/1:5,0:6:6.23:6,0,45	0/0:21,0:19:37.69:0,38,460	0/0:29,0:23:44.13:0,44,608	0/0:29,2:30:20.46:0,20,715	0/0:128,2:130:99:0,162,3497	0/0:41,0:41:75.08:0,75,1099	0/0:33,1:34:26.52:0,27,860	0/0:75,1:76:99:0,125,2226	0/0:27,1:26:15.04:0,15,219	0/1:25,12:33:99:328,0,301	0/1:6,7:12:35.04:129,0,35	0/0:9,0:9:5.94:0,6,41
chr10	3734407	.	CTGTG	C	1453.31	PASS	AB=0.692;AC=6;AF=0.107;AN=56;BaseQRankSum=6.072;DP=1153;FS=6.498;HRun=0;HaplotypeScore=240.2553;InbreedingCoeff=0.5464;MQ=56.68;MQ0=57;MQRankSum=-7.036;QD=17.51;ReadPosRankSum=0.629;VQSLOD=2.7223;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:35:47.92:0,48,1128	0/0:8,0:9:20.84:0,21,358	0/0:76,0:13:27.51:0,28,479	0/0:85,0:24:44.71:0,45,632	0/0:18,0:20:38.71:0,39,802	0/0:24,0:26:59.99:0,60,1438	0/0:45,0:45:90.27:0,90,2069	0/0:26,3:34:65.26:0,65,362	0/0:60,0:61:99:0,128,3019	0/0:49,0:49:99:0,138,3047	0/0:12,0:13:32.90:0,33,733	0/0:55,0:55:99:0,132,3024	0/0:39,0:42:98.67:0,99,2144	0/0:46,0:47:99:0,120,2574	0/0:51,0:45:63.08:0,63,1395	0/0:45,0:44:99:0,105,2414	0/1:9,3:14:40.32:40,0,89	0/0:39,0:37:45.01:0,45,1879	0/0:21,0:19:42.14:0,42,1043	0/0:23,0:24:56.98:0,57,1278	0/0:121,0:123:99:0,271,6208	0/0:33,0:32:66.23:0,66,1656	0/0:25,0:25:66.22:0,66,1581	0/0:60,0:61:99:0,138,3252	0/0:25,0:24:32.90:0,33,741	0/1:21,25:40:62.27:1298,0,62	1/1:9,4:11:9.02:134,9,0	1/1:2,8:8:6.02:104,6,0
chr10	3734476	.	C	CTG	4507.66	PASS	AB=0.864;AC=14;AF=0.250;AN=56;BaseQRankSum=-3.626;DP=1232;FS=17.662;HRun=0;HaplotypeScore=205.8877;InbreedingCoeff=0.6197;MQ=53.63;MQ0=72;MQRankSum=-1.926;QD=13.91;ReadPosRankSum=-3.021;VQSLOD=2.9541;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:20,16:41:12.51:711,13,0	0/0:14,0:14:30.10:0,30,386	0/0:43,0:9:17.96:0,18,179	0/0:63,0:10:8.38:0,8,95	0/0:34,0:34:81.25:0,81,1020	0/0:31,0:31:68.57:0,69,795	0/0:40,0:40:95.84:0,96,1264	0/1:38,3:19:5.96:6,0,102	0/0:77,0:77:99:0,189,2337	0/0:63,0:60:99:0,154,1952	0/0:36,0:35:78.21:0,78,981	0/0:48,0:48:84.66:0,85,1270	0/0:50,0:50:99:0,129,1611	0/0:55,0:55:99:0,133,1602	1/1:36,17:43:30.41:781,30,0	0/0:43,0:42:99:0,99,1236	0/1:13,0:23:69.41:89,0,69	1/1:15,19:36:56.26:1057,56,0	0/0:21,0:19:54.17:0,54,694	0/0:36,0:35:75.24:0,75,960	0/0:140,2:142:99:0,275,3917	0/0:38,0:38:93.30:0,93,1194	0/0:25,0:25:57.18:0,57,720	0/0:45,1:46:78.21:0,78,986	1/1:16,6:17:26.98:411,27,0	0/1:27,9:32:99:360,0,103	1/1:11,13:21:12.15:515,12,0	0/1:13,11:23:10.67:577,0,11
chr10	3734759	.	CTG	C	1899.82	PASS	AB=0.788;AC=6;AF=0.107;AN=56;BaseQRankSum=7.487;DP=1399;FS=2.586;HRun=0;HaplotypeScore=205.3542;InbreedingCoeff=0.5640;MQ=55.47;MQ0=67;MQRankSum=-2.030;QD=14.39;ReadPosRankSum=1.581;VQSLOD=3.8045;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:62,1:65:77.01:0,77,1580	0/0:16,0:16:30.10:0,30,480	0/0:60,0:11:30.08:0,30,409	0/0:80,0:18:30.06:0,30,415	0/0:42,0:42:93.30:0,93,1488	0/0:32,0:32:48.33:0,48,978	0/0:44,1:43:57.15:0,57,1403	0/0:64,0:48:99:0,102,1419	0/0:55,1:56:89.14:0,89,1787	0/0:73,1:72:99:0,112,2540	0/0:26,1:27:22.57:0,23,872	0/0:64,1:65:69.99:0,70,1963	0/0:38,1:39:50.07:0,50,1261	0/0:45,1:46:51.59:0,52,1487	0/0:60,0:58:99:0,126,1910	0/0:44,0:44:99:0,105,1576	1/1:17,2:17:4.87:45,5,0	0/0:30,1:34:56.82:0,57,867	0/0:29,0:23:63.20:0,63,981	0/0:30,1:30:32.04:0,32,1005	0/0:170,1:169:99:0,328,5908	0/0:49,0:49:99:0,114,1738	0/0:26,0:26:39.04:0,39,557	0/0:69,0:68:99:0,181,2790	0/0:26,0:25:48.13:0,48,725	0/1:35,36:61:99:1320,0,248	1/1:5,16:21:45.13:544,45,0	0/1:19,2:20:34.13:119,0,34
chr10	3734801	.	GTGTGCA	G	184.32	PASS	AB=0.942;AC=4;AF=0.071;AN=56;BaseQRankSum=6.526;DP=1335;FS=8.662;HRun=0;HaplotypeScore=291.4077;InbreedingCoeff=0.3710;MQ=56.02;MQ0=30;MQRankSum=-4.485;QD=1.55;ReadPosRankSum=-3.008;VQSLOD=0.7754;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:72,0:66:99:0,145,4559	0/0:18,0:18:41.93:0,42,1191	0/0:71,0:20:21.01:0,21,1180	0/1:59,0:20:1.53:2,0,893	0/0:38,0:38:99:0,102,3363	0/0:34,0:34:77.86:0,78,2597	0/0:39,0:39:99:0,111,3771	0/0:61,0:48:99:0,114,3948	0/0:48,0:48:99:0,138,4619	0/0:65,0:65:99:0,181,6011	0/0:27,0:27:72.25:0,72,2325	0/0:57,0:57:99:0,151,4988	0/0:40,0:40:99:0,117,3880	0/0:50,0:50:99:0,133,4056	0/0:69,0:65:99:0,147,5559	0/0:43,0:43:99:0,120,4012	1/1:3,2:4:3.01:39,3,0	0/0:33,0:30:81.28:0,81,2542	0/0:31,0:28:75.26:0,75,2282	0/0:34,0:34:90.31:0,90,3049	0/0:182,0:182:99:0,467,14866	0/0:48,0:48:99:0,129,4206	0/0:24,0:24:60.21:0,60,2013	0/0:65,0:63:99:0,171,5597	0/0:24,0:24:38.74:0,39,1417	0/1:48,6:50:99:237,0,3716	0/0:31,0:30:72.25:0,72,2329	0/0:10,0:10:21.03:0,21,627
chr10	3734820	.	ATG	A	1769.97	PASS	AB=0.833;AC=6;AF=0.111;AN=54;BaseQRankSum=8.333;DP=1328;FS=0.000;HRun=0;HaplotypeScore=198.2024;InbreedingCoeff=0.6502;MQ=55.25;MQ0=36;MQRankSum=-2.273;QD=11.49;ReadPosRankSum=-0.051;VQSLOD=3.2966;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:68,0:63:99:0,132,2189	0/0:15,0:15:42.14:0,42,705	0/0:83,0:15:23.51:0,24,272	0/1:63,0:14:5.94:6,0,172	0/0:38,0:38:99:0,105,1736	0/0:28,0:27:66.20:0,66,1080	0/0:43,0:43:99:0,102,1652	0/0:53,0:45:99:0,105,1708	0/0:49,0:49:99:0,120,2006	0/0:68,1:68:99:0,139,2860	0/0:23,0:23:51.17:0,51,857	0/0:55,0:55:99:0,147,2394	0/0:49,0:49:99:0,126,2090	0/0:44,0:44:99:0,117,1906	0/0:69,0:65:99:0,169,2815	0/0:43,0:43:99:0,117,1873	./.	0/0:40,0:38:96.12:0,96,1438	0/0:24,0:23:51.13:0,51,825	0/0:36,0:36:99:0,102,1662	0/0:173,0:173:99:0,439,7232	0/0:39,0:39:99:0,105,1713	0/0:26,0:26:63.20:0,63,1033	0/0:74,0:73:99:0,193,3063	0/0:25,0:25:50.38:0,50,801	0/1:23,23:42:69.47:915,0,69	1/1:9,24:31:43.30:711,43,0	1/1:2,9:10:21.07:270,21,0
chr10	3734836	.	C	CTGTG	176.30	PASS	AB=0.737;AC=1;AF=0.018;AN=56;BaseQRankSum=4.458;DP=1316;FS=7.903;HRun=0;HaplotypeScore=274.7876;InbreedingCoeff=0.0638;MQ=54.97;MQ0=34;MQRankSum=-3.508;QD=12.59;ReadPosRankSum=-3.022;VQSLOD=1.6039;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:68,0:64:99:0,141,2319	0/0:12,0:12:33.11:0,33,570	0/0:81,0:17:35.59:0,36,490	0/0:80,0:16:18.03:0,18,293	0/0:39,0:39:99:0,105,1745	0/0:27,0:27:64.91:0,65,1057	0/0:45,0:45:84.14:0,84,1408	0/0:44,0:38:75.24:0,75,1249	0/0:44,0:45:99:0,117,1960	0/0:69,0:69:99:0,147,2425	0/0:22,0:22:54.18:0,54,912	0/0:48,0:49:99:0,111,1854	0/0:48,0:48:99:0,132,2152	0/0:47,0:47:99:0,111,1833	0/0:66,0:62:99:0,135,2244	0/0:40,0:40:99:0,111,1847	0/1:9,5:14:13.29:251,0,13	0/0:36,0:34:63:0,63,1220	0/0:18,0:19:39.10:0,39,590	0/0:39,0:39:90.18:0,90,1463	0/0:179,0:179:99:0,385,6467	0/0:38,0:38:90.24:0,90,1437	0/0:22,0:22:54.17:0,54,907	0/0:70,0:70:99:0,160,2766	0/0:25,0:25:48.83:0,49,759	0/0:47,0:42:85.83:0,86,1362	0/0:32,0:29:61.37:0,61,999	0/0:10,0:9:15.05:0,15,246
chr10	3734855	.	A	ATG	308.48	PASS	AB=0.939;AC=3;AF=0.054;AN=56;BaseQRankSum=7.059;DP=1338;FS=30.002;HRun=0;HaplotypeScore=238.2060;InbreedingCoeff=0.5780;MQ=58.55;MQ0=33;MQRankSum=-6.426;QD=6.43;ReadPosRankSum=-2.191;VQSLOD=1.6442;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:55:99:0,102,1283	0/0:14,0:14:30.10:0,30,386	0/0:77,0:25:40.40:0,40,421	0/0:92,0:26:45.83:0,46,536	0/0:42,0:42:99:0,114,1453	0/0:31,0:30:60.07:0,60,758	0/0:38,0:38:37.41:0,37,986	0/0:32,0:29:51.16:0,51,637	0/0:53,0:53:99:0,123,1574	0/0:65,0:64:99:0,147,1834	0/0:28,0:28:57:0,57,690	0/0:42,1:43:99:0,108,1385	0/0:50,0:50:99:0,138,1752	0/0:47,0:47:99:0,123,1576	0/0:65,2:61:99:0,143,1675	0/0:45,0:44:99:0,114,1452	1/1:6,11:15:29.39:355,29,0	0/0:38,0:36:5.52:0,6,879	0/0:30,0:28:51.16:0,51,656	0/0:37,0:37:87.18:0,87,1113	0/0:169,1:170:99:0,388,4892	0/0:41,0:41:99:0,99,1226	0/0:27,0:27:68.94:0,69,845	0/0:72,0:72:99:0,180,2290	0/0:31,0:31:59.78:0,60,734	0/0:50,2:45:10.74:0,11,1106	0/1:29,2:28:59.46:59,0,321	0/0:9,0:7:17.92:0,18,170
chr10	3734869	.	C	CTG	8672.47	PASS	AB=0.750;AC=17;AF=0.304;AN=56;BaseQRankSum=-1.213;DP=1365;FS=5.984;HRun=0;HaplotypeScore=211.0884;InbreedingCoeff=0.8682;MQ=57.05;MQ0=61;MQRankSum=2.590;QD=25.51;ReadPosRankSum=-0.086;VQSLOD=4.7367;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:24,31:54:97:1645,97,0	0/0:15,0:15:33.11:0,33,424	0/0:67,0:20:15.14:0,15,148	0/0:98,0:23:29.44:0,29,363	0/0:47,0:47:99:0,102,1267	0/0:31,0:30:59.76:0,60,713	0/0:39,0:39:93.13:0,93,1162	1/1:18,10:20:39.48:532,39,0	0/0:56,0:56:99:0,117,1457	0/0:67,0:66:99:0,171,2097	0/0:31,0:30:62.54:0,63,755	0/0:47,0:47:93.26:0,93,1158	0/0:50,0:50:99:0,119,1581	0/0:56,0:56:99:0,132,1614	1/1:23,48:60:99:2144,129,0	0/0:44,0:43:99:0,123,1546	0/1:13,7:19:61.79:197,0,62	1/1:8,29:35:25.17:1289,25,0	0/0:36,0:29:57.18:0,57,730	0/0:40,0:40:95.23:0,95,1199	0/0:152,0:152:99:0,373,4693	0/0:43,0:43:99:0,99,1213	0/0:32,0:32:72.15:0,72,868	0/0:73,0:73:99:0,174,2222	1/1:14,18:31:53.74:810,54,0	1/1:29,28:48:16.35:1406,16,0	1/1:9,18:23:33.49:462,33,0	1/1:4,6:8:0.38:187,0,0
chr10	3734889	.	ATG	A	411.42	PASS	AB=0.837;AC=4;AF=0.071;AN=56;BaseQRankSum=7.178;DP=1354;FS=0.000;HRun=0;HaplotypeScore=224.6822;InbreedingCoeff=0.4114;MQ=52.76;MQ0=107;MQRankSum=-3.478;QD=5.71;ReadPosRankSum=-2.155;VQSLOD=2.8490;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:59,0:57:89.69:0,90,1374	0/0:16,0:16:25.33:0,25,391	0/0:53,0:4:2.68:0,3,11	0/0:75,0:13:3.81:0,4,19	0/0:41,0:40:99:0,99,1590	0/0:28,0:28:60.07:0,60,1006	0/0:48,0:48:72.76:0,73,1640	0/0:35,0:27:63.17:0,63,1007	0/0:49,0:49:99:0,126,2074	0/0:71,1:69:99:0,139,2794	0/0:36,0:35:51.63:0,52,995	0/0:46,0:46:99:0,117,1866	0/0:46,0:46:99:0,123,1980	0/0:50,0:50:99:0,132,2179	0/0:70,0:61:99:0,129,2116	0/0:51,0:50:99:0,102,2050	0/0:27,0:24:34.91:0,35,477	0/1:33,2:34:7.90:8,0,1020	0/0:43,0:31:65.05:0,65,1078	0/0:42,0:42:83.09:0,83,1328	0/0:150,0:149:99:0,270,4905	0/0:40,0:40:84.29:0,84,1399	0/0:29,0:29:72.23:0,72,1159	0/0:76,1:77:99:0,196,3240	0/0:29,0:28:60.12:0,60,963	0/0:68,0:51:99:0,131,2198	1/1:11,18:25:34.83:411,35,0	0/1:5,3:5:38.56:103,0,39
chr10	3734963	.	A	ATG	11146.01	PASS	AB=0.576;AC=17;AF=0.304;AN=56;BaseQRankSum=-9.942;DP=1280;FS=4.443;HRun=0;HaplotypeScore=176.9353;InbreedingCoeff=0.8688;MQ=59.34;MQ0=73;MQRankSum=-1.697;QD=31.66;ReadPosRankSum=-2.181;VQSLOD=5.7699;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:27,36:62:99:2168,138,0	0/0:19,0:19:21.14:0,21,442	0/0:59,0:16:0.35:0,0,1	0/0:83,0:17:11.55:0,12,71	0/0:23,0:23:51.17:0,51,656	0/0:31,0:31:75.23:0,75,949	0/0:46,0:45:96.28:0,96,1205	1/1:17,21:31:48.09:713,48,0	0/0:51,0:51:99:0,120,1527	0/0:65,0:64:99:0,171,2116	0/0:27,0:27:69.22:0,69,882	0/0:58,0:58:99:0,126,1611	0/0:47,0:47:99:0,122,1513	0/0:51,0:51:99:0,117,1472	1/1:28,35:62:99:2616,154,0	0/0:40,0:40:55.03:0,55,1205	1/1:14,33:45:84.07:1372,84,0	1/1:11,20:30:29.58:1091,30,0	0/0:24,0:19:33.04:0,33,403	0/0:38,0:37:96.21:0,96,1190	0/0:124,2:125:99:0,301,3804	0/0:47,0:47:99:0,111,1377	0/0:23,0:23:60.19:0,60,764	0/0:66,0:66:99:0,162,2039	1/1:6,18:24:45.11:732,45,0	1/1:17,22:34:6.48:1129,6,0	0/1:9,24:33:46.46:937,0,46	1/1:3,8:11:26.90:389,27,0
chr10	3735053	.	G	GTGTA	1060.49	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-2.553;DP=1320;FS=0.000;HRun=0;HaplotypeScore=244.4363;InbreedingCoeff=0.9512;MQ=58.97;MQ0=27;MQRankSum=0.237;QD=36.57;ReadPosRankSum=1.125;VQSLOD=3.1459;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:57:99:0,141,2529	0/0:17,0:17:42.08:0,42,725	0/0:65,0:24:45.41:0,45,871	0/0:92,0:31:44.16:0,44,556	0/0:32,0:32:96.29:0,96,1740	0/0:29,0:29:69.17:0,69,1142	0/0:58,0:58:99:0,147,2592	0/0:45,0:37:93.20:0,93,1578	0/0:40,0:40:95.76:0,96,1713	0/0:56,0:56:99:0,150,2713	0/0:25,0:25:66.21:0,66,1202	0/0:49,0:49:99:0,135,2357	0/0:50,0:50:99:0,135,2422	0/0:55,0:55:99:0,150,2729	0/0:56,0:54:99:0,115,2022	0/0:44,0:44:99:0,126,2283	1/1:14,14:28:10.05:1145,10,0	0/0:31,0:31:75.01:0,75,1323	0/0:28,0:24:69.20:0,69,1192	0/0:37,0:37:93.26:0,93,1623	0/0:154,0:154:99:0,425,7783	0/0:38,0:38:97.85:0,98,1761	0/0:26,0:26:66.21:0,66,1209	0/0:63,0:63:99:0,156,2832	0/0:31,0:31:62.71:0,63,1427	0/0:59,0:56:99:0,159,2826	0/0:33,0:32:56.95:0,57,946	0/0:18,0:18:51.09:0,51,830
chr10	3735171	.	CTG	C	342.30	PASS	AB=0.735;AC=1;AF=0.018;AN=56;BaseQRankSum=4.314;DP=1320;FS=2.051;HRun=0;HaplotypeScore=217.5844;InbreedingCoeff=-0.0196;MQ=58.89;MQ0=51;MQRankSum=-2.312;QD=9.51;ReadPosRankSum=-0.702;VQSLOD=3.3919;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:74,0:74:99:0,183,2828	0/0:13,0:13:32.98:0,33,556	0/0:55,0:11:10.80:0,11,304	0/0:81,0:25:30.56:0,31,344	0/0:44,0:43:93.24:0,93,1478	0/0:31,0:31:82.99:0,83,1369	0/0:55,0:55:99:0,100,2279	0/0:52,0:46:99:0,117,1829	0/0:50,0:50:99:0,120,1905	0/0:62,0:60:99:0,153,2488	0/0:26,0:26:60.18:0,60,960	0/0:48,1:50:79.97:0,80,1736	0/0:47,0:47:99:0,123,2050	0/0:56,0:56:99:0,150,2446	0/0:55,0:55:99:0,117,1945	0/0:41,0:41:90.31:0,90,1518	0/1:23,13:36:99:417,0,275	0/0:40,0:40:99:0,114,1849	0/0:29,0:21:51.16:0,51,860	0/0:34,0:34:84.29:0,84,1416	0/0:128,1:126:99:0,285,4529	0/0:33,0:33:96.29:0,96,1574	0/0:28,0:28:60.19:0,60,985	0/0:74,0:74:99:0,178,2920	0/0:29,0:29:63.20:0,63,1031	0/0:56,0:54:99:0,135,2192	0/0:22,0:22:57.18:0,57,918	0/0:17,0:16:42.14:0,42,708
chr10	3735250	.	C	CTG	780.37	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=8.082;DP=1205;FS=3.340;HRun=0;HaplotypeScore=226.5909;InbreedingCoeff=0.5772;MQ=58.12;MQ0=25;MQRankSum=-8.336;QD=12.19;ReadPosRankSum=-4.204;VQSLOD=2.7445;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:69,0:67:99:0,174,2167	0/0:13,0:13:36.12:0,36,473	0/0:76,0:21:32.97:0,33,392	0/0:79,0:26:16.72:0,17,312	0/0:31,0:31:87.26:0,87,1125	0/0:26,0:27:72.03:0,72,884	0/0:44,0:43:99:0,114,1451	0/0:47,0:46:99:0,114,1419	0/0:50,0:50:99:0,138,1779	0/0:44,0:43:99:0,114,1441	0/0:25,0:25:60.19:0,60,786	0/0:53,0:53:99:0,141,1817	0/0:49,0:49:99:0,129,1634	0/0:49,0:49:99:0,129,1654	0/0:50,0:50:89.34:0,89,1107	0/0:34,0:34:92.97:0,93,1205	1/1:9,18:27:55.42:842,55,0	0/0:32,0:32:40.79:0,41,859	0/0:28,0:25:60.19:0,60,773	0/0:41,0:41:99:0,114,1469	0/0:115,0:116:99:0,310,3916	0/0:46,0:46:99:0,108,1418	0/0:19,0:19:47.94:0,48,630	0/0:52,0:52:99:0,129,1679	0/0:33,0:33:38.07:0,38,530	0/1:37,0:37:44.82:45,0,667	0/0:26,0:26:8.74:0,9,88	0/0:5,0:5:6.55:0,7,87
chr10	3735262	.	C	CTGTG	4094.44	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=10.835;DP=1227;FS=3.017;HRun=0;HaplotypeScore=253.9373;InbreedingCoeff=0.6898;MQ=58.22;MQ0=27;MQRankSum=-3.103;QD=12.41;ReadPosRankSum=-3.606;VQSLOD=2.8343;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:67,0:62:15.48:15,0,684	0/0:12,0:12:33.09:0,33,506	0/0:77,0:18:19.96:0,20,396	0/0:76,0:21:11.39:0,11,190	0/0:31,0:31:57.18:0,57,932	0/0:26,0:27:69.19:0,69,1090	0/0:46,0:46:92.44:0,92,1479	0/1:41,0:40:65.02:65,0,276	0/0:53,0:55:99:0,123,1974	0/0:46,0:46:99:0,114,1794	0/0:28,0:28:69.21:0,69,1132	0/0:56,0:56:99:0,144,2344	0/0:42,0:46:99:0,132,2121	0/0:46,0:47:99:0,114,1729	1/1:14,38:56:39.53:1597,40,0	0/0:40,0:40:98.64:0,99,1521	0/1:25,0:25:90.01:202,0,90	1/1:18,8:27:37.25:715,37,0	0/0:36,0:33:65.10:0,65,963	0/0:42,0:42:99:0,102,1657	0/0:114,0:115:99:0,240,3814	0/0:39,0:43:96.31:0,96,1573	0/0:19,0:20:45.10:0,45,681	0/0:49,0:50:99:0,123,1913	1/1:11,18:33:39.11:796,39,0	1/1:8,1:43:9.43:523,9,0	1/1:2,0:32:8.43:126,8,0	1/1:6,0:6:10.09:56,10,0
chr10	3735275	.	TGTGA	T	696.13	PASS	AB=0.956;AC=8;AF=0.143;AN=56;BaseQRankSum=3.672;DP=1153;FS=8.896;HRun=0;HaplotypeScore=255.6545;InbreedingCoeff=-0.1413;MQ=58.49;MQ0=22;MQRankSum=2.209;QD=2.85;ReadPosRankSum=-5.789;VQSLOD=0.1855;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:67,0:62:73.74:127,0,74	0/0:13,0:13:39.09:0,39,848	0/0:57,0:13:23.53:0,24,553	0/0:51,0:14:20.45:0,20,331	0/0:26,0:26:69.14:0,69,1600	0/0:31,0:31:87.19:0,87,1933	0/0:45,0:44:99:0,118,2692	0/1:38,0:37:9.86:188,0,10	0/0:51,0:51:99:0,132,3215	0/0:49,0:48:99:0,138,3170	0/0:25,0:25:69.24:0,69,1852	0/0:60,0:60:99:0,171,4063	0/0:53,0:53:99:0,156,3506	0/0:48,0:48:99:0,138,3160	0/0:51,1:52:2.05:0,2,609	0/0:44,0:44:99:0,129,2985	0/1:17,8:25:33.42:393,0,33	0/1:25,0:25:41.48:41,0,344	0/0:38,0:36:99:0,99,2114	0/0:47,0:47:99:0,132,3078	0/0:104,0:103:99:0,273,6500	0/0:40,0:40:99:0,105,2586	0/0:21,0:21:60.11:0,60,1303	0/0:53,0:53:99:0,144,3346	0/1:28,4:32:5.74:6,0,305	0/1:30,0:30:31.73:32,0,393	0/1:20,0:20:33.89:34,0,92	0/1:7,0:7:5.98:6,0,36
chr10	3735277	.	TGA	T	3959.47	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=7.007;DP=1132;FS=10.681;HRun=0;HaplotypeScore=204.2640;InbreedingCoeff=0.4450;MQ=58.75;MQ0=17;MQRankSum=-1.817;QD=13.70;ReadPosRankSum=-3.898;VQSLOD=1.7237;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:26,40:61:99:2182,162,0	0/0:14,0:14:42.08:0,42,644	0/0:52,0:13:23.51:0,24,420	0/0:47,1:14:19.68:0,20,264	0/0:23,0:23:69.14:0,69,1166	0/0:31,0:31:74.74:0,75,1360	0/0:43,0:42:99:0,106,1891	1/1:2,32:33:89.73:1078,90,0	0/0:51,0:51:99:0,110,2265	0/0:51,0:50:99:0,129,2309	0/0:25,0:25:69.24:0,69,1328	0/0:60,0:60:99:0,171,2952	0/0:54,0:54:99:0,124,2521	0/0:47,0:47:99:0,138,2240	0/1:52,0:52:59.94:60,0,100	0/0:44,0:44:99:0,129,2090	1/1:24,0:24:19.63:285,20,0	0/1:24,0:24:16.35:85,0,16	0/0:37,0:37:99:0,102,1496	0/0:46,0:46:99:0,132,2187	0/0:101,0:100:99:0,264,4612	0/0:41,0:41:96.80:0,97,1870	0/0:22,0:22:48.76:0,49,926	0/0:52,0:52:99:0,135,2401	0/1:32,0:32:18.08:18,0,60	0/1:30,0:30:99:139,0,136	0/1:20,0:20:26.50:51,0,27	1/1:7,0:7:1.23:62,1,0
chr10	3735278	.	G	GTGCA	1363.84	PASS	AB=0.952;AC=6;AF=0.107;AN=56;BaseQRankSum=12.526;DP=1115;FS=22.737;HRun=0;HaplotypeScore=250.2007;InbreedingCoeff=-0.1209;MQ=58.99;MQ0=15;MQRankSum=-2.543;QD=7.66;ReadPosRankSum=1.179;VQSLOD=1.4749;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:66,0:61:99:0,102,1206	0/0:14,0:14:42.13:0,42,783	0/0:49,0:13:25.25:0,25,485	0/0:48,0:14:20.05:0,20,300	0/0:23,0:23:69.22:0,69,1329	0/0:31,0:31:87.30:0,87,1676	0/0:44,0:43:99:0,117,2263	0/0:32,0:31:20.21:0,20,603	0/0:50,0:50:99:0,135,2655	0/0:49,0:49:99:0,144,2735	0/0:25,0:25:69.24:0,69,1445	0/0:59,0:59:99:0,172,3411	0/0:54,0:54:99:0,159,3016	0/0:49,0:49:99:0,138,2690	0/1:51,0:51:99:473,0,182	0/0:44,0:44:99:0,129,2513	0/1:13,9:22:35:588,0,35	0/1:23,0:23:99:182,0,178	0/0:36,0:36:99:0,102,1888	0/0:46,0:46:99:0,132,2565	0/0:98,0:97:99:0,280,5460	0/0:41,0:41:99:0,108,2136	0/0:22,0:22:63.20:0,63,1147	0/0:51,0:51:99:0,147,2791	0/1:32,0:32:63.65:193,0,64	0/1:30,0:30:34.70:35,0,386	0/1:20,0:20:17.48:17,0,103	0/0:6,0:6:13.84:0,14,134
chr10	3735280	.	G	GCA	403.02	PASS	AB=0.647;AC=1;AF=0.018;AN=56;BaseQRankSum=6.956;DP=1094;FS=1.910;HRun=0;HaplotypeScore=213.1725;InbreedingCoeff=-0.0189;MQ=58.96;MQ0=12;MQRankSum=-6.506;QD=18.32;ReadPosRankSum=-1.930;VQSLOD=3.1800;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:66,0:61:99:0,159,1164	0/0:14,0:14:42.12:0,42,641	0/0:39,0:10:30.09:0,30,403	0/0:41,0:13:18.06:0,18,259	0/0:22,0:22:66.23:0,66,1072	0/0:31,0:31:87.27:0,87,1389	0/0:45,0:44:99:0,120,1947	0/0:33,0:32:82.49:0,82,661	0/0:48,0:48:99:0,135,2183	0/0:48,0:48:99:0,141,2268	0/0:25,0:25:69.24:0,69,1122	0/0:60,0:60:99:0,175,2780	0/0:54,0:54:99:0,157,2532	0/0:48,0:48:99:0,141,2275	0/0:50,0:50:78.11:0,78,760	0/0:45,0:45:99:0,129,2075	0/1:10,12:22:35.38:477,0,35	0/0:24,0:24:39.49:0,39,453	0/0:36,0:36:99:0,102,1639	0/0:46,0:46:99:0,132,2101	0/0:96,0:95:99:0,274,4371	0/0:42,0:42:99:0,111,1760	0/0:22,0:22:63.19:0,63,998	0/0:48,0:48:99:0,138,2249	0/0:33,0:33:38.60:0,39,363	0/0:30,0:30:29.84:0,30,590	0/0:20,0:20:16.77:0,17,169	0/0:5,0:5:15.02:0,15,171
chr10	3735528	.	CCT	C	6578.32	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=13.661;DP=710;FS=0.000;HRun=0;HaplotypeScore=95.0324;InbreedingCoeff=0.9943;MQ=75.52;MQ0=2;MQRankSum=-1.613;QD=28.11;ReadPosRankSum=-0.029;VQSLOD=5.5066;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,47:52:99:1680,135,0	0/0:16,0:16:48.16:0,48,790	0/0:30,1:25:14.10:0,14,636	0/0:41,0:35:57.55:0,58,976	0/0:23,0:23:60.19:0,60,960	0/0:21,0:21:51.14:0,51,797	0/0:22,0:22:45.15:0,45,748	1/1:9,26:35:75.14:840,75,0	0/0:23,0:23:60.21:0,60,994	0/0:24,0:24:69.23:0,69,1114	0/0:17,0:17:45.12:0,45,694	0/0:28,0:28:75.22:0,75,1194	0/0:20,0:20:48.16:0,48,793	0/0:33,1:34:58.45:0,58,1477	1/1:5,18:23:45.14:568,45,0	0/0:20,0:20:54.18:0,54,898	1/1:2,27:29:72.23:908,72,0	1/1:2,17:19:48.15:606,48,0	0/0:20,0:20:48.15:0,48,747	0/0:30,0:30:87.27:0,87,1383	0/0:38,0:38:99:0,105,1734	0/0:20,0:20:42.14:0,42,693	0/0:15,1:16:42.13:0,42,651	0/0:31,0:31:75.24:0,75,1222	1/1:4,14:18:39.12:492,39,0	1/1:1,27:29:78.03:917,78,0	1/1:4,13:16:30.10:378,30,0	1/1:6,5:11:15.05:189,15,0
chr10	3737448	.	TACACACAC	T	795.57	PASS	AB=0.868;AC=12;AF=0.240;AN=50;BaseQRankSum=4.479;DP=485;FS=5.765;HRun=0;HaplotypeScore=118.7871;InbreedingCoeff=0.6152;MQ=69.95;MQ0=7;MQRankSum=-3.728;QD=7.44;ReadPosRankSum=2.431;VQSLOD=1.2148;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:27.09:0,27,801	./.	./.	./.	0/0:11,0:12:18.03:0,18,391	0/0:15,0:15:18.06:0,18,587	0/0:30,0:31:27.54:0,28,646	0/0:17,0:17:3.01:0,3,42	0/0:14,0:14:12.02:0,12,277	0/0:17,0:17:15.05:0,15,350	0/0:15,0:15:9.01:0,9,258	0/0:9,0:8:6.02:0,6,156	0/0:10,0:10:9.19:0,9,214	0/0:4,0:4:9.03:0,9,274	1/1:14,5:19:6.02:123,6,0	0/0:20,0:19:18.53:0,19,575	0/1:9,0:14:0:0,0,0	1/1:10,6:19:18.06:390,18,0	0/0:9,0:9:9.03:0,9,273	0/0:11,0:11:3:0,3,25	0/0:45,0:46:63.22:0,63,1716	0/0:12,0:12:12.04:0,12,370	0/0:12,0:12:3.01:0,3,111	0/0:30,0:33:45.13:0,45,1216	1/1:10,7:18:9.03:204,9,0	1/1:17,0:17:3.15:86,3,0	1/1:12,1:13:5.73:95,6,0	0/1:7,0:5:3.98:42,0,4
chr10	3738244	.	T	TG	1847.53	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-9.171;DP=610;FS=1.725;HRun=7;HaplotypeScore=67.9017;InbreedingCoeff=0.9887;MQ=95.22;MQ0=0;MQRankSum=-2.359;QD=30.79;ReadPosRankSum=3.165;VQSLOD=4.0030;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:49:99:0,133,1256	0/0:6,0:6:15.02:0,15,145	0/0:28,0:28:72.08:0,72,684	0/0:33,0:33:77.97:0,78,734	0/0:13,0:13:39.06:0,39,376	0/0:21,0:21:57.07:0,57,545	0/0:24,0:24:63.02:0,63,588	0/0:15,0:15:30.04:0,30,289	0/0:29,0:29:75.12:0,75,724	0/0:28,0:28:75.12:0,75,723	0/0:8,0:8:18.03:0,18,174	0/0:19,1:20:20.82:0,21,474	0/0:20,0:20:54.08:0,54,521	0/0:16,0:16:39.06:0,39,377	1/1:1,15:16:39.59:471,40,0	0/0:17,0:17:42.06:0,42,405	0/0:34,0:34:96.08:0,96,917	1/1:0,21:21:63.19:760,63,0	0/0:20,0:20:48.07:0,48,463	0/0:22,0:22:60.09:0,60,578	0/0:48,0:48:99:0,129,1239	0/0:11,0:11:30.03:0,30,283	0/0:14,0:14:36.05:0,36,344	0/0:33,0:33:90.14:0,90,869	1/1:0,23:23:63.19:760,63,0	0/0:14,0:14:39.05:0,39,373	0/0:16,0:16:42.06:0,42,406	0/0:11,0:11:24.03:0,24,232
chr10	3739171	.	C	CAG	1075.74	PASS	AB=0.840;AC=38;AF=0.792;AN=48;BaseQRankSum=0.683;DP=519;FS=32.094;HRun=0;HaplotypeScore=96.4420;InbreedingCoeff=0.3320;MQ=62.73;MQ0=6;MQRankSum=-2.789;QD=2.82;ReadPosRankSum=2.100;VQSLOD=0.3749;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:37:0:0,0,0	1/1:7,0:7:8.99:75,9,0	./.	./.	1/1:15,0:15:2.99:25,3,0	1/1:14,0:14:2.99:25,3,0	1/1:19,0:19:8.96:69,9,0	1/1:31,0:30:3.38:8,3,0	0/0:27,0:26:20.84:0,21,186	1/1:21,0:21:9.39:80,9,0	1/1:8,0:8:3:25,3,0	1/1:15,4:19:5.61:54,6,0	0/1:10,0:15:0.57:36,0,1	1/1:16,0:15:8.87:64,9,0	0/1:14,7:22:7.64:38,0,8	1/1:22,0:22:20.96:172,21,0	0/1:18,4:22:36.59:37,0,81	1/1:13,1:14:11.98:115,12,0	1/1:25,0:25:10.57:66,11,0	0/1:11,0:11:0:0,0,0	1/1:27,0:27:12.93:103,13,0	1/1:16,0:16:8.99:75,9,0	./.	1/1:20,0:20:8.99:83,9,0	1/1:16,0:16:5.99:50,6,0	1/1:21,0:21:0.47:1,0,0	0/0:14,0:14:12:0,12,118	./.
chr10	3740880	.	AACACC	A	695.46	PASS	AB=1.000;AC=11;AF=0.204;AN=54;BaseQRankSum=5.151;DP=620;FS=15.116;HRun=0;HaplotypeScore=97.6856;InbreedingCoeff=0.7463;MQ=76.33;MQ0=51;MQRankSum=-1.680;QD=5.65;ReadPosRankSum=-1.776;VQSLOD=0.9094;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:18:2.04:6,2,0	0/0:11,0:11:24.08:0,24,450	0/0:73,0:26:66.20:0,66,863	0/0:93,0:43:51.31:0,51,818	0/0:18,0:18:38.24:0,38,643	0/0:11,0:11:30.10:0,30,453	0/0:17,0:17:39.13:0,39,579	0/0:20,0:20:42.14:0,42,561	0/0:14,0:14:29.22:0,29,504	0/0:22,0:22:45.62:0,46,746	0/0:16,0:16:30.09:0,30,511	0/0:17,0:17:48.15:0,48,798	0/0:19,0:19:55.42:0,55,880	0/0:14,0:14:32.93:0,33,523	1/1:5,7:9:3.01:60,3,0	0/0:18,0:18:39.13:0,39,878	0/0:24,0:23:54.14:0,54,1040	1/1:22,0:15:14.75:193,15,0	0/0:13,0:13:30.09:0,30,483	0/0:15,0:15:42.13:0,42,655	0/0:29,0:27:42.14:0,42,769	0/0:18,0:18:48.16:0,48,960	0/0:16,0:15:45.15:0,45,744	0/0:18,0:18:39.09:0,39,721	1/1:23,0:16:4.96:86,5,0	0/1:27,0:15:37.85:312,0,38	1/1:4,10:12:11.01:186,11,0	./.
chr10	3740884	.	CCACACCA	C	560.37	PASS	AB=0.924;AC=6;AF=0.111;AN=54;BaseQRankSum=5.237;DP=613;FS=17.704;HRun=0;HaplotypeScore=116.8184;InbreedingCoeff=0.2585;MQ=71.38;MQ0=53;MQRankSum=-1.005;QD=5.66;ReadPosRankSum=-2.477;VQSLOD=0.8439;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:19:2.97:0,3,20	0/0:10,0:10:24.08:0,24,572	0/0:70,0:23:66.17:0,66,859	0/0:89,0:39:52.23:0,52,832	0/0:17,0:17:42.11:0,42,793	0/0:11,0:11:30.10:0,30,553	0/0:18,0:18:39.12:0,39,642	0/0:18,0:18:42.04:0,42,560	0/0:12,0:12:33.08:0,33,608	0/0:21,0:21:45.62:0,46,862	0/0:15,0:15:30.09:0,30,598	0/0:19,0:19:54.17:0,54,1169	0/0:23,0:23:62.31:0,62,1139	0/0:16,0:16:32.87:0,33,604	0/1:13,0:10:6.97:7,0,63	0/0:17,0:17:39.13:0,39,1108	0/0:26,0:24:54.14:0,54,1270	0/1:12,10:16:7.68:123,0,8	0/0:13,0:13:33.07:0,33,585	0/0:14,0:14:42.13:0,42,803	0/0:25,0:24:42.14:0,42,911	0/0:18,0:17:48.16:0,48,1191	0/0:16,0:15:45.15:0,45,849	0/0:18,0:18:39.09:0,39,879	1/1:13,12:18:10.95:207,11,0	0/1:24,0:12:59.90:312,0,60	0/1:14,0:12:32.80:33,0,50	./.
chr10	3740886	.	ACAC	A	587.87	PASS	AB=0.908;AC=7;AF=0.130;AN=54;BaseQRankSum=5.219;DP=615;FS=26.679;HRun=0;HaplotypeScore=83.2678;InbreedingCoeff=0.2597;MQ=67.34;MQ0=54;MQRankSum=-0.850;QD=4.63;ReadPosRankSum=-1.685;VQSLOD=-0.3035;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:10,17:19:13.67:44,0,14	0/0:10,0:10:23.97:0,24,356	0/0:70,0:23:66.21:0,66,869	0/0:84,0:34:61.50:0,62,821	0/0:18,0:18:39.11:0,39,602	0/0:12,0:12:29.89:0,30,379	0/0:18,0:18:39.08:0,39,530	0/0:18,0:18:42.04:0,42,560	0/0:12,0:12:27.31:0,27,452	0/0:20,0:20:45.41:0,45,632	0/0:15,0:15:30.09:0,30,446	0/0:21,0:21:55.72:0,56,834	0/0:23,0:23:55.93:0,56,825	0/0:15,0:15:32.95:0,33,458	0/1:14,0:11:54.73:55,0,77	0/0:14,0:14:39.13:0,39,695	0/0:27,0:25:56.73:0,57,821	1/1:23,0:16:7.84:119,8,0	0/0:14,0:14:33.54:0,34,464	0/0:16,0:16:41.91:0,42,574	0/0:28,0:25:8.37:0,8,600	0/0:19,0:18:51.13:0,51,808	0/0:16,0:15:45.15:0,45,667	0/0:18,0:18:39.09:0,39,561	0/1:24,0:17:1.25:75,0,1	0/1:26,0:14:70.97:306,0,71	0/1:12,1:11:15.18:119,0,15	./.
chr10	3740889	.	C	CCA	440.87	PASS	AB=0.899;AC=9;AF=0.180;AN=50;BaseQRankSum=-4.277;DP=640;FS=2.323;HRun=0;HaplotypeScore=86.6513;InbreedingCoeff=-0.0018;MQ=64.15;MQ0=56;MQRankSum=3.503;QD=1.90;ReadPosRankSum=0.701;VQSLOD=1.1491;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:22:5.56:0,6,30	0/0:11,0:11:3.35:0,3,21	./.	0/1:80,0:30:0:0,0,0	0/0:15,0:17:15.17:0,15,124	0/0:10,0:15:5.84:0,6,39	./.	./.	0/0:10,0:11:8.86:0,9,78	0/1:17,0:19:7.66:21,0,8	0/0:15,0:15:8.99:0,9,75	0/0:22,0:22:14.70:0,15,159	0/0:22,0:25:11.15:0,11,90	0/0:14,0:14:3.01:0,3,32	0/1:11,0:10:26.88:27,0,93	0/0:13,0:13:12.02:0,12,128	0/1:25,9:32:21.44:199,0,21	0/0:19,0:17:13.29:0,13,89	0/0:13,0:13:3:0,3,32	0/0:16,0:20:8.85:0,9,78	1/1:25,0:23:6.02:78,6,0	0/1:21,2:22:22.98:23,0,152	0/1:17,0:16:22.47:33,0,22	0/1:12,7:20:14.06:184,0,14	0/0:22,0:21:11.35:0,11,57	0/0:21,0:14:5.85:0,6,61	0/0:13,0:12:17.28:0,17,112	0/0:3,0:3:2.99:0,3,25
chr10	3741534	.	TCACACACACACACACACACACACACACACA	T	716.23	PASS	AB=0.722;AC=1;AF=0.019;AN=54;BaseQRankSum=1.415;DP=460;FS=0.000;HRun=0;HaplotypeScore=274.8543;InbreedingCoeff=0.0751;MQ=71.10;MQ0=18;MQRankSum=-3.561;QD=27.55;ReadPosRankSum=-1.379;VQSLOD=2.0428;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:16,9:26:5.29:790,0,5	0/0:6,0:6:6.02:0,6,342	0/0:35,0:20:4.26:0,4,128	0/0:34,0:25:11.40:0,11,225	0/0:6,0:6:6.02:0,6,418	0/0:16,0:15:22.01:0,22,2034	0/0:16,0:16:18.53:0,19,1219	0/0:16,0:16:15.05:0,15,943	0/0:16,0:18:21.07:0,21,1950	0/0:12,0:12:10.59:0,11,1098	./.	0/0:9,0:9:9.03:0,9,606	0/0:9,0:8:6.02:0,6,244	0/0:8,0:8:9.03:0,9,1135	0/0:11,0:10:12.04:0,12,1154	0/0:12,0:11:18.06:0,18,1904	0/0:24,0:26:39.11:0,39,2628	0/0:22,0:20:44.36:0,44,3037	0/0:16,0:16:17.80:0,18,1383	0/0:6,0:6:4.83:0,5,389	0/0:30,0:28:28.63:0,29,2545	0/0:18,0:18:7.74:0,8,424	0/0:14,0:14:18.06:0,18,1762	0/0:38,0:38:66.23:0,66,7417	0/0:12,0:10:15.05:0,15,1144	0/0:13,0:12:18.06:0,18,1071	0/0:14,0:14:21.07:0,21,1178	0/0:4,0:3:3.01:0,3,170
chr10	3741759	.	AG	A	810.84	PASS	AB=0.953;AC=25;AF=0.446;AN=56;BaseQRankSum=5.909;DP=401;FS=26.667;HRun=12;HaplotypeScore=53.9763;InbreedingCoeff=0.2387;MQ=75.97;MQ0=1;MQRankSum=0.324;QD=3.54;ReadPosRankSum=1.799;VQSLOD=-0.3965;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:29:40.73:120,41,0	0/0:4,0:4:9:0,9,85	0/1:19,0:15:31.43:31,0,49	0/0:13,0:10:5.97:0,6,39	0/0:16,0:16:12:0,12,113	0/0:14,0:14:12.02:0,12,122	0/0:15,1:16:0.87:0,1,190	0/0:16,0:16:2.83:0,3,15	0/0:17,0:18:33.05:0,33,324	0/1:15,0:16:26.54:27,0,100	0/1:6,1:7:12.42:12,0,48	0/0:15,0:15:20.77:0,21,207	0/1:9,1:10:11.26:11,0,63	1/1:10,0:10:2.90:23,3,0	1/1:6,5:12:16.88:122,17,0	0/1:10,0:10:8.20:8,0,94	0/0:17,1:20:9.92:0,10,356	1/1:6,10:18:21.98:151,22,0	0/1:12,0:12:1.95:2,0,89	0/1:7,1:9:14.71:15,0,32	0/1:7,1:8:14.22:14,0,52	0/0:20,1:21:0.13:0,0,207	0/1:17,0:17:1.96:2,0,150	0/0:17,0:17:33.06:0,33,330	1/1:3,5:8:8.89:70,9,0	1/1:10,6:17:19.89:142,20,0	1/1:14,8:22:28.92:215,29,0	1/1:1,1:2:2.99:23,3,0
chr10	3741908	.	CAG	C	3957.56	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=11.069;DP=593;FS=2.996;HRun=0;HaplotypeScore=68.1021;InbreedingCoeff=0.9991;MQ=93.38;MQ0=0;MQRankSum=-1.414;QD=34.12;ReadPosRankSum=3.243;VQSLOD=5.9477;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,46:50:99:1732,126,0	0/0:13,0:13:33.10:0,33,557	0/0:30,0:30:78.21:0,78,1306	0/0:25,0:25:60.17:0,60,1017	0/0:23,0:23:66.21:0,66,1136	0/0:15,0:15:45.15:0,45,799	0/0:26,0:26:75.26:0,75,1326	0/0:18,0:18:51.17:0,51,905	0/0:16,0:16:48.16:0,48,852	0/0:19,0:19:57.20:0,57,1001	0/0:14,0:14:39.13:0,39,692	0/0:16,0:16:42.14:0,42,740	0/0:14,0:14:39.12:0,39,664	0/0:13,0:13:33.11:0,33,586	1/1:0,28:28:69.23:948,69,0	0/0:22,0:22:60.19:0,60,1038	0/0:21,0:21:63.22:0,63,1112	1/1:1,21:22:60.20:824,60,0	0/0:18,0:18:51.17:0,51,905	0/0:15,0:15:42.14:0,42,736	0/0:27,0:27:78.27:0,78,1384	0/0:21,0:21:63.22:0,63,1113	0/0:15,0:15:39.13:0,39,691	0/0:27,0:27:78.27:0,78,1384	1/1:2,14:16:33.11:453,33,0	0/0:31,0:31:90.31:0,90,1586	0/0:30,0:30:84.29:0,84,1490	0/0:8,0:8:24.08:0,24,426
chr10	3742729	.	GGTGTGT	G	915.96	PASS	AB=0.917;AC=14;AF=0.259;AN=54;BaseQRankSum=6.617;DP=625;FS=3.140;HRun=0;HaplotypeScore=137.7650;InbreedingCoeff=0.6898;MQ=71.79;MQ0=7;MQRankSum=-6.318;QD=4.82;ReadPosRankSum=1.073;VQSLOD=2.7327;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:33:5.04:66,5,0	0/0:7,0:7:9.03:0,9,276	0/0:22,0:18:0.47:0,0,1	./.	0/0:11,0:11:6.02:0,6,113	0/0:17,0:19:30.09:0,30,734	0/0:25,0:25:30.09:0,30,782	0/1:30,0:30:0:0,0,0	0/0:18,0:18:36.11:0,36,998	0/0:26,0:26:21.07:0,21,488	0/0:10,0:10:6.02:0,6,131	0/0:21,0:24:18.04:0,18,374	0/0:14,0:14:24.08:0,24,662	0/0:15,0:17:18.06:0,18,327	1/1:17,10:31:30.99:487,31,0	0/0:23,0:25:48.15:0,48,1327	0/0:13,0:17:17.97:0,18,432	0/1:24,6:29:3.80:112,0,4	0/0:27,0:29:28.60:0,29,534	0/0:11,0:11:6.02:0,6,143	0/0:57,0:57:54.17:0,54,1289	0/0:22,0:23:21.07:0,21,541	0/0:10,0:10:8.21:0,8,273	0/0:32,0:32:45.15:0,45,1298	1/1:11,0:13:3.89:44,4,0	1/1:16,0:24:6.02:76,6,0	1/1:12,0:20:17.98:247,18,0	1/1:5,0:8:3.01:42,3,0
chr10	3744914	.	G	GT	2524.34	PASS	AB=0.944;AC=9;AF=0.161;AN=56;BaseQRankSum=6.087;DP=618;FS=0.886;HRun=9;HaplotypeScore=70.6445;InbreedingCoeff=0.8905;MQ=69.19;MQ0=1;MQRankSum=-7.912;QD=21.04;ReadPosRankSum=-0.014;VQSLOD=4.2080;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:62.97:0,63,544	0/0:16,0:16:38.99:0,39,339	0/0:18,0:18:32.81:0,33,265	0/0:6,0:4:5.99:0,6,50	0/0:25,1:26:35.59:0,36,516	0/0:24,0:24:62.97:0,63,546	0/0:25,1:26:38.80:0,39,566	0/0:26,0:26:62.94:0,63,543	0/0:21,0:21:50.97:0,51,443	0/0:31,0:31:80.97:0,81,700	0/0:16,0:16:32.98:0,33,286	0/0:18,0:18:47.98:0,48,416	0/0:33,0:33:86.97:0,87,755	0/0:21,0:21:56.97:0,57,491	0/0:18,1:19:47.96:0,48,414	0/0:20,0:20:47.96:0,48,412	1/1:4,14:18:48.10:519,48,0	0/0:23,0:23:47.91:0,48,404	0/1:15,1:17:1.94:2,0,188	0/0:25,0:25:65.98:0,66,573	0/0:21,0:21:53.99:0,54,469	0/0:19,0:19:47.99:0,48,417	0/0:27,0:27:65.96:0,66,572	0/0:17,0:17:47.94:0,48,410	0/0:22,0:22:59.95:0,60,517	1/1:7,18:25:37.10:623,37,0	1/1:12,25:38:92.99:981,93,0	1/1:6,15:22:53.95:560,54,0
chr10	3744946	.	AT	A	4298.15	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=15.382;DP=630;FS=1.503;HRun=9;HaplotypeScore=67.7667;InbreedingCoeff=0.9929;MQ=68.01;MQ0=1;MQRankSum=-4.203;QD=23.75;ReadPosRankSum=3.193;VQSLOD=5.7578;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,16:17:45.02:412,45,0	0/0:12,0:12:30.09:0,30,346	0/0:15,1:16:16.95:0,17,193	0/0:8,0:6:11.99:0,12,114	0/0:24,0:25:63:0,63,689	0/0:28,0:28:75.21:0,75,857	0/0:18,0:18:42.12:0,42,485	0/0:36,0:36:96.27:0,96,1091	0/0:20,0:21:57:0,57,638	0/0:38,0:38:99:0,108,1243	0/0:14,0:16:44.76:0,45,463	0/0:21,0:21:63.19:0,63,727	0/0:28,0:28:78.23:0,78,900	0/0:28,0:28:75.18:0,75,851	1/1:2,13:15:39.02:357,39,0	0/0:18,0:18:51.14:0,51,577	1/1:2,15:17:36.02:329,36,0	1/1:2,19:21:51.02:467,51,0	0/0:23,0:23:66.18:0,66,751	0/0:28,0:28:75.21:0,75,856	0/0:19,0:19:51.15:0,51,588	0/0:22,1:23:35.72:0,36,662	0/0:26,0:26:63.17:0,63,717	0/0:17,0:17:45.13:0,45,519	1/1:1,26:27:75.04:687,75,0	1/1:3,22:25:66.01:598,66,0	1/1:4,34:38:99:927,102,0	1/1:2,19:21:57.03:522,57,0
chr10	3747473	.	AT	A	1932.71	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=11.443;DP=665;FS=0.931;HRun=9;HaplotypeScore=64.8330;InbreedingCoeff=0.9992;MQ=69.14;MQ0=0;MQRankSum=2.050;QD=21.72;ReadPosRankSum=1.627;VQSLOD=4.4857;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:38:99:0,105,1211	0/0:11,0:11:30.09:0,30,346	0/0:20,0:19:36.08:0,36,384	0/0:12,0:12:24.01:0,24,244	0/0:39,0:39:99:0,105,1212	0/0:25,0:26:69.15:0,69,764	0/0:25,0:24:60.18:0,60,692	0/0:22,0:22:57.17:0,57,658	0/0:19,0:19:57.17:0,57,658	0/0:41,0:41:99:0,105,1201	0/0:22,0:22:66.19:0,66,757	0/0:29,0:29:84.25:0,84,969	0/0:25,0:25:66.20:0,66,762	0/0:23,0:23:60.17:0,60,684	0/0:26,0:26:69.19:0,69,787	0/0:19,0:19:54.15:0,54,615	1/1:2,28:31:80.26:720,80,0	0/0:14,0:14:36.07:0,36,401	0/0:22,0:22:63.19:0,63,726	0/0:25,0:25:66.20:0,66,761	0/0:23,0:25:63.01:0,63,697	0/0:22,0:22:60.16:0,60,676	0/0:17,0:17:48.12:0,48,536	0/0:32,0:32:93.28:0,93,1073	0/0:21,0:21:63.19:0,63,727	1/1:1,22:23:66.04:604,66,0	1/1:4,17:21:48.02:439,48,0	1/1:2,12:14:36.02:329,36,0
chr10	3747897	.	GTT	G	1982.82	PASS	AB=0.611;AC=14;AF=0.250;AN=56;BaseQRankSum=9.643;DP=607;FS=10.205;HRun=14;HaplotypeScore=82.1778;InbreedingCoeff=0.8229;MQ=66.54;MQ0=2;MQRankSum=1.966;QD=10.17;ReadPosRankSum=6.332;VQSLOD=1.4011;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,21:31:13.59:413,14,0	0/0:17,0:17:45.13:0,45,600	0/0:16,0:13:17.27:0,17,200	0/0:9,0:8:9.03:0,9,118	0/0:22,0:26:62.02:0,62,622	0/0:22,0:23:62.54:0,63,733	0/0:20,1:21:17.35:0,17,520	0/0:16,0:28:54.07:0,54,555	0/0:11,0:14:39.09:0,39,486	0/0:23,0:31:64.51:0,65,587	0/0:25,0:25:64.02:0,64,762	0/0:19,0:20:53.50:0,54,555	0/0:24,0:23:66.15:0,66,809	0/0:14,0:14:24.04:0,24,260	1/1:5,1:26:44.38:221,44,0	0/0:16,0:21:54.07:0,54,599	0/1:8,12:21:25.85:269,0,26	1/1:0,1:11:22.22:111,22,0	0/0:9,0:10:14.51:0,15,131	0/0:23,0:34:87.82:0,88,989	0/0:22,0:23:41.55:0,42,455	0/0:16,0:18:45.10:0,45,546	0/0:18,0:20:45.02:0,45,537	0/0:13,0:17:41.60:0,42,512	1/1:4,0:26:21.14:164,21,0	0/1:9,17:26:0.35:317,0,0	1/1:8,12:20:7.85:228,8,0	1/1:7,25:34:44.60:447,45,0
chr10	3748187	.	TCTTCTTCAATTC	T	2665.25	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=8.744;DP=713;FS=0.672;HRun=0;HaplotypeScore=233.4222;InbreedingCoeff=0.9996;MQ=66.58;MQ0=8;MQRankSum=-3.366;QD=66.63;ReadPosRankSum=-4.058;VQSLOD=2.5520;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:87.30:0,87,4629	0/0:12,0:12:36.12:0,36,1990	0/0:31,0:17:46.36:0,46,1388	0/0:32,0:21:55.07:0,55,2331	0/0:28,0:28:84.29:0,84,4953	0/0:32,0:32:96.33:0,96,5566	0/0:26,0:26:78.27:0,78,4293	1/1:7,33:39:96.30:2760,96,0	0/0:27,0:27:81.28:0,81,4580	0/0:27,0:27:81.28:0,81,4296	0/0:29,0:29:78.27:0,78,4102	0/0:25,0:25:75.23:0,75,4048	0/0:21,0:21:63.20:0,63,3452	0/0:12,0:12:33.11:0,33,1984	0/0:20,0:20:60.20:0,60,3160	0/0:24,0:24:66.21:0,66,3462	0/0:20,0:20:60.21:0,60,3568	0/0:31,0:31:90.26:0,90,4883	0/0:24,0:24:72.21:0,72,3976	0/0:27,0:27:81.24:0,81,4470	0/0:28,0:28:81.27:0,81,4109	0/0:15,0:15:42.14:0,42,2381	0/0:17,0:17:48.16:0,48,2723	0/0:31,0:31:87.30:0,87,4920	0/0:23,0:23:69.24:0,69,4107	0/0:30,0:30:87.30:0,87,5139	0/0:29,0:29:84.29:0,84,4824	0/0:22,0:22:63.21:0,63,3494
chr10	3748991	.	CACCGCCTGACCTCATCATCT	C	377.75	PASS	AB=0.846;AC=3;AF=0.058;AN=52;BaseQRankSum=2.517;DP=816;FS=4.626;HRun=0;HaplotypeScore=310.0180;InbreedingCoeff=0.5012;MQ=46.03;MQ0=68;MQRankSum=-1.783;QD=12.19;ReadPosRankSum=-1.689;VQSLOD=1.6401;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:39:32.28:0,32,4187	0/0:8,0:8:21.07:0,21,1714	0/0:24,0:6:5.91:0,6,66	./.	0/0:19,0:19:51.18:0,51,3650	0/0:20,0:18:36.12:0,36,2850	0/0:42,0:35:35.92:0,36,2176	./.	0/0:44,0:43:75:0,75,6094	0/0:24,0:24:60.20:0,60,4335	0/0:13,0:13:27.08:0,27,1878	0/0:39,0:39:84.21:0,84,6841	0/0:28,0:27:48.14:0,48,4196	0/0:45,0:44:93.79:0,94,7411	0/1:18,4:20:99:145,0,1237	0/0:28,0:26:60.21:0,60,4811	0/0:58,0:54:81.26:0,81,5758	0/0:32,0:31:57.17:0,57,4074	0/0:27,0:15:42.14:0,42,3817	0/0:18,0:18:42.14:0,42,3677	0/0:73,0:70:99:0,163,12364	0/0:13,0:13:30.10:0,30,2221	0/0:11,0:10:27.09:0,27,2189	0/0:47,0:47:81.28:0,81,6532	1/1:2,7:9:6.02:326,6,0	0/0:28,0:25:57.20:0,57,3566	0/0:25,0:21:38.69:0,39,2367	0/0:23,0:22:43.39:0,43,3149
chr10	3749141	.	CCTTGACAACAGAAT	C	3581.83	PASS	AB=0.656;AC=5;AF=0.096;AN=52;BaseQRankSum=8.262;DP=618;FS=5.135;HRun=0;HaplotypeScore=153.2394;InbreedingCoeff=0.7537;MQ=29.35;MQ0=156;MQRankSum=-3.255;QD=67.58;ReadPosRankSum=5.017;VQSLOD=3.2251;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:21:39.13:0,39,2537	0/0:4,0:3:9.03:0,9,626	./.	./.	0/0:28,0:19:30.10:0,30,1748	0/0:22,0:17:24.08:0,24,1676	0/0:28,0:11:27.09:0,27,1680	0/0:31,0:18:54.12:0,54,3277	0/0:22,0:17:29.91:0,30,1933	0/0:20,0:14:36.12:0,36,2329	0/0:16,0:14:30.10:0,30,1795	0/0:26,0:23:50.98:0,51,3406	0/0:19,0:17:27.56:0,28,1872	0/0:28,0:23:48.64:0,49,2712	0/0:17,0:13:24.55:0,25,1581	0/0:18,0:17:36.12:0,36,2399	0/0:43,0:21:39.13:0,39,2164	0/0:32,0:16:36.12:0,36,2441	0/0:23,0:12:30.10:0,30,1801	0/0:26,0:25:72.25:0,72,4636	0/0:35,0:11:26.84:0,27,1863	0/0:18,0:12:27.09:0,27,1803	0/0:19,0:14:27.09:0,27,1343	0/0:33,0:17:36.12:0,36,2286	0/0:13,0:11:30.10:0,30,2009	0/1:10,11:18:90.82:1192,0,91	1/1:1,16:13:33.58:1384,34,0	1/1:7,8:9:24.08:1006,24,0
chr10	3749293	.	ATC	A	2435.48	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=9.154;DP=517;FS=1.717;HRun=0;HaplotypeScore=58.0935;InbreedingCoeff=0.9971;MQ=56.39;MQ0=2;MQRankSum=1.859;QD=35.30;ReadPosRankSum=1.388;VQSLOD=5.5572;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,23:23:63.21:961,63,0	0/0:8,0:8:21.07:0,21,404	0/0:17,0:15:44.98:0,45,815	0/0:9,0:9:24.05:0,24,378	0/0:23,0:23:57.20:0,57,1098	0/0:26,0:26:72.25:0,72,1377	0/0:25,0:25:72.20:0,72,1338	0/0:29,0:28:87.27:0,87,1578	0/0:17,0:17:45.15:0,45,869	0/0:22,0:22:66.22:0,66,1232	0/0:12,0:12:27.09:0,27,521	0/0:22,0:22:66.23:0,66,1269	0/0:14,0:14:42.08:0,42,734	0/0:20,0:20:57.20:0,57,1098	1/1:0,15:14:39.13:596,39,0	0/0:10,0:10:30.08:0,30,544	0/0:22,0:22:60.14:0,60,1085	1/1:0,16:16:39.13:597,39,0	0/0:15,0:15:45.15:0,45,868	0/0:8,0:8:24.07:0,24,430	0/0:25,0:25:75.23:0,75,1369	0/0:15,0:15:42.13:0,42,777	0/0:16,0:16:48.16:0,48,926	0/0:17,0:17:48.15:0,48,869	1/1:0,15:14:30.10:442,30,0	0/0:25,0:25:75.26:0,75,1441	0/0:34,0:33:93.32:0,93,1736	0/0:17,0:17:45.14:0,45,834
chr10	3749651	.	TTGGTGGTGGTGGTGGTGG	T	190.84	PASS	AC=6;AF=0.125;AN=48;BaseQRankSum=3.375;DP=303;FS=0.000;HRun=0;HaplotypeScore=141.6505;InbreedingCoeff=0.4499;MQ=74.13;MQ0=6;MQRankSum=-1.395;QD=4.24;ReadPosRankSum=1.608;VQSLOD=2.4984;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:23,3:26:9.02:170,9,0	./.	./.	0/0:25,0:19:3.01:0,3,44	0/0:7,0:7:9.03:0,9,413	0/0:21,0:21:10.59:0,11,581	0/0:14,0:14:9.92:0,10,462	0/0:7,0:7:3.01:0,3,40	0/0:11,0:11:11.87:0,12,585	0/0:10,0:10:13.29:0,13,630	0/0:2,0:2:3.01:0,3,240	0/0:8,0:8:12.04:0,12,609	0/0:8,0:8:12.04:0,12,283	0/0:8,0:8:12.04:0,12,474	./.	0/0:10,0:9:12.04:0,12,510	0/0:7,0:7:3.01:0,3,103	1/1:5,0:4:5.98:96,6,0	0/0:9,0:8:2.04:0,2,6	./.	0/0:28,0:26:21.07:0,21,1149	0/0:11,0:11:12.04:0,12,608	0/0:8,0:8:3.01:0,3,253	0/0:10,0:10:12.04:0,12,956	1/1:14,0:14:3.01:35,3,0	0/0:9,0:9:3:0,3,26	0/0:8,0:9:9.03:0,9,136	0/0:4,0:4:6:0,6,69
chr10	3749724	.	GTACA	G	405.66	PASS	AB=0.722;AC=3;AF=0.054;AN=56;BaseQRankSum=2.589;DP=541;FS=14.356;HRun=0;HaplotypeScore=70.0781;InbreedingCoeff=-0.0855;MQ=42.19;MQ0=71;MQRankSum=-1.661;QD=11.59;ReadPosRankSum=-0.148;VQSLOD=1.6485;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,1:20:14.89:0,15,178	0/0:3,0:3:6.02:0,6,163	0/0:114,0:22:58.96:0,59,901	0/0:159,0:22:57.61:0,58,968	0/0:4,0:4:12.03:0,12,277	0/0:8,0:8:3.59:0,4,552	0/0:18,1:18:42.14:0,42,1055	0/0:14,0:14:35.92:0,36,626	0/0:9,0:9:18.93:0,19,435	0/0:7,0:5:12.04:0,12,332	0/0:5,0:5:15.05:0,15,398	0/0:8,0:8:21.07:0,21,495	0/0:7,0:6:18.06:0,18,472	0/0:10,0:10:30.10:0,30,754	0/0:10,0:10:6.49:0,6,124	0/0:7,0:7:18.06:0,18,434	0/0:14,0:13:31.69:0,32,335	0/1:7,1:7:73.10:73,0,130	0/0:9,0:8:24.08:0,24,534	0/0:8,0:8:21.07:0,21,489	0/0:25,0:22:63.21:0,63,1551	0/0:5,0:5:15.04:0,15,332	0/0:10,0:10:30.10:0,30,817	0/0:14,0:13:27.09:0,27,712	0/0:7,1:8:3.01:0,3,98	0/1:8,8:15:99:286,0,548	0/1:4,7:10:99:146,0,161	0/0:5,0:5:9.03:0,9,210
chr10	3749728	.	A	ATGTGTGTGTGTG	1810.50	PASS	AB=0.833;AC=14;AF=0.259;AN=54;BaseQRankSum=-0.234;DP=540;FS=9.014;HRun=0;HaplotypeScore=113.0666;InbreedingCoeff=0.6251;MQ=43.29;MQ0=63;MQRankSum=-4.176;QD=18.66;ReadPosRankSum=-0.471;VQSLOD=1.8124;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:2,0:2:6.02:0,6,199	0/0:105,0:21:11.91:0,12,176	0/0:153,0:23:13.11:0,13,205	0/0:3,0:3:9.03:0,9,313	0/0:9,0:9:24.83:0,25,710	0/0:19,0:20:36.12:0,36,1014	0/1:9,0:18:87.50:88,0,181	0/0:9,0:9:15.66:0,16,534	0/0:7,0:5:9.03:0,9,304	0/0:6,0:6:15.05:0,15,447	0/0:5,0:8:21.07:0,21,591	0/0:7,0:6:17.98:0,18,507	0/0:10,0:10:24.07:0,24,670	1/1:9,2:12:3.01:176,3,0	0/0:5,0:6:18.06:0,18,495	0/0:5,0:14:27.06:0,27,589	1/1:8,0:7:10.28:283,10,0	0/0:8,0:7:6:0,6,128	0/0:8,0:9:24.07:0,24,629	0/0:27,0:24:54.18:0,54,1527	0/0:5,0:5:6.02:0,6,209	0/0:10,0:10:24.08:0,24,803	0/1:15,0:15:11.27:11,0,695	1/1:6,4:11:9.03:519,9,0	1/1:16,0:15:28.90:494,29,0	1/1:11,0:10:12.04:231,12,0	1/1:2,3:6:3.01:176,3,0
chr10	3751600	.	A	AAACTT	13345.55	PASS	AB=0.531;AC=17;AF=0.304;AN=56;BaseQRankSum=-12.455;DP=746;FS=1.869;HRun=0;HaplotypeScore=133.4986;InbreedingCoeff=0.9150;MQ=90.71;MQ0=0;MQRankSum=-13.090;QD=67.40;ReadPosRankSum=0.249;VQSLOD=6.0105;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,21:25:63.17:1588,63,0	0/0:14,0:14:39.07:0,39,759	0/0:32,0:32:77.38:0,77,1531	0/0:30,0:30:72.16:0,72,1356	0/0:21,0:21:60.15:0,60,1106	0/0:25,0:25:72.23:0,72,1442	0/0:20,0:20:54.15:0,54,1033	1/1:6,17:26:72.23:2013,72,0	0/0:24,0:24:69.23:0,69,1412	0/0:32,0:32:90.26:0,90,1812	0/0:26,0:26:63.22:0,63,1322	0/0:29,0:29:81.26:0,81,1648	0/0:38,0:38:99:0,111,2329	0/0:35,0:35:99:0,105,2203	1/1:3,16:23:45.15:1318,45,0	0/0:24,0:24:66.20:0,66,1309	1/1:2,20:22:51.17:1493,51,0	1/1:1,11:14:21.07:651,21,0	0/0:30,0:30:86.88:0,87,1771	0/0:22,0:22:66.21:0,66,1335	0/0:57,0:57:99:0,166,3244	0/0:29,0:29:78.24:0,78,1547	0/0:26,0:26:72.25:0,72,1511	0/0:34,0:34:93.31:0,93,1915	1/1:3,14:18:39.13:1153,39,0	0/1:4,26:34:26.76:2420,0,27	1/1:2,21:23:60.20:1687,60,0	1/1:1,11:12:33.11:1023,33,0
chr10	3752279	.	A	AAG	4009.33	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=6.009;DP=776;FS=0.000;HRun=0;HaplotypeScore=120.4043;InbreedingCoeff=0.8673;MQ=77.57;MQ0=4;MQRankSum=-0.992;QD=33.13;ReadPosRankSum=2.484;VQSLOD=5.9500;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,36:44:99:1624,99,0	0/1:9,0:9:19.66:20,0,239	0/0:60,0:47:46.90:0,47,649	0/0:68,0:46:19.25:0,19,519	0/0:25,0:24:57.17:0,57,701	0/0:15,0:15:39.12:0,39,488	0/0:20,0:20:54.12:0,54,646	0/0:49,0:49:99:0,99,1173	0/0:28,0:28:63.19:0,63,777	0/0:29,0:29:66.21:0,66,825	0/0:16,0:17:47.98:0,48,577	0/0:16,0:16:39.12:0,39,487	0/0:21,0:21:54.16:0,54,662	0/0:26,0:26:63.20:0,63,787	1/1:5,24:29:72.18:1141,72,0	0/0:26,0:26:63.18:0,63,766	0/0:23,0:23:60.19:0,60,750	1/1:4,13:17:33.11:544,33,0	0/0:24,0:24:54.14:0,54,649	0/0:23,0:23:60.19:0,60,749	0/0:33,0:33:72.23:0,72,900	0/0:14,0:14:36.11:0,36,450	0/0:18,0:18:51.16:0,51,637	0/0:28,0:27:69.21:0,69,851	1/1:2,20:22:42.14:680,42,0	0/0:32,0:32:84.26:0,84,1040	0/0:25,0:25:63.16:0,63,768	0/0:33,0:33:93.22:0,93,1128
chr10	3753616	.	AG	A	3060.08	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=15.213;DP=644;FS=11.582;HRun=7;HaplotypeScore=84.4126;InbreedingCoeff=0.9182;MQ=84.73;MQ0=0;MQRankSum=-1.480;QD=25.50;ReadPosRankSum=3.313;VQSLOD=3.5895;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,42:45:99:1224,120,0	0/0:7,0:7:21.06:0,21,252	0/0:31,0:31:57.78:0,58,695	0/0:16,2:18:0.07:0,0,220	0/0:18,0:18:48.14:0,48,592	0/0:24,0:24:63.20:0,63,791	0/0:19,0:19:57.13:0,57,676	0/0:27,0:27:75.22:0,75,920	0/0:34,0:34:96.31:0,96,1200	0/0:24,0:24:63.16:0,63,757	0/0:12,0:12:33.11:0,33,415	0/0:16,0:16:48.15:0,48,604	0/0:19,0:19:57.18:0,57,715	0/0:28,0:28:72.21:0,72,882	1/1:0,35:35:99:1010,99,0	0/0:18,0:18:48.15:0,48,604	0/0:36,0:36:93.30:0,93,1170	1/1:0,26:26:63.14:643,63,0	0/0:23,0:23:63.16:0,63,775	0/0:21,0:21:54.16:0,54,664	0/0:53,0:53:99:0,138,1638	0/0:11,0:11:33.11:0,33,415	0/0:6,0:6:15.02:0,15,164	0/0:29,0:28:75.22:0,75,919	1/1:1,13:14:12.56:340,13,0	0/0:19,0:19:48.15:0,48,604	0/0:21,0:21:54.16:0,54,667	0/0:10,0:10:30.10:0,30,377
chr10	3754905	.	A	AC	904.21	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=7.034;DP=508;FS=0.593;HRun=4;HaplotypeScore=69.1688;InbreedingCoeff=0.8581;MQ=85.10;MQ0=0;MQRankSum=-1.868;QD=13.30;ReadPosRankSum=0.988;VQSLOD=2.0093;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:78.34:0,78,529	0/0:6,0:6:18.05:0,18,203	0/0:17,0:17:36.09:0,36,397	0/0:21,0:22:56.63:0,57,602	0/0:11,0:11:30.08:0,30,337	0/0:13,0:13:39.11:0,39,441	0/0:29,0:29:84.22:0,84,941	0/0:13,0:13:33.09:0,33,374	0/0:13,0:13:39.11:0,39,442	0/0:9,0:9:18.05:0,18,198	0/0:8,0:8:21.06:0,21,237	0/0:18,0:18:45.13:0,45,510	0/0:13,0:13:39.11:0,39,442	0/0:22,0:22:51.12:0,51,568	0/1:11,0:11:1.74:2,0,92	0/0:16,0:16:45.11:0,45,501	1/1:2,0:24:38.75:186,39,0	0/0:24,0:24:35.64:0,36,287	0/0:20,0:20:57.15:0,57,634	0/0:7,0:7:18.04:0,18,194	0/0:43,0:43:99:0,108,1214	0/0:13,0:13:33.07:0,33,363	0/0:14,0:14:36.10:0,36,407	0/0:47,0:47:99:0,122,1363	0/0:16,0:16:18.24:0,18,186	1/1:2,14:16:40.53:501,41,0	1/1:2,10:12:27.07:327,27,0	1/1:0,5:4:3.01:39,3,0
chr10	3755808	.	CTGTA	C	3741.54	PASS	AB=0.966;AC=23;AF=0.442;AN=52;BaseQRankSum=10.743;DP=831;FS=2.516;HRun=0;HaplotypeScore=166.8084;InbreedingCoeff=0.7282;MQ=60.78;MQ0=3;MQRankSum=-0.455;QD=10.54;ReadPosRankSum=0.536;VQSLOD=3.3331;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:6.32:0,6,1004	1/1:1,9:10:21.03:300,21,0	./.	./.	1/1:12,14:26:30.06:440,30,0	0/0:25,0:25:45.15:0,45,1036	0/0:24,0:24:27.09:0,27,609	0/0:47,0:47:15.04:0,15,310	0/0:28,1:29:4.45:0,4,926	0/0:31,0:31:63.22:0,63,1483	0/0:36,0:36:66.23:0,66,1499	1/1:11,14:25:36.12:561,36,0	1/1:13,12:25:27.09:420,27,0	1/1:9,19:28:48.16:747,48,0	1/1:46,0:46:14:155,14,0	0/0:37,1:38:26.67:0,27,1831	0/0:29,0:29:17.08:0,17,154	0/1:16,0:16:8.56:94,0,9	0/0:30,0:30:24.08:0,24,555	0/0:28,0:28:54.19:0,54,1255	0/1:31,2:33:15.19:15,0,1514	0/0:31,0:31:48.16:0,48,1109	0/1:20,1:21:13.60:14,0,670	0/0:12,0:27:27.09:0,27,484	1/1:50,0:50:19.21:195,19,0	1/1:29,0:28:49.29:471,49,0	1/1:23,0:23:29.97:270,30,0	1/1:23,0:23:8.82:59,9,0
chr10	3755833	.	TGTATG	T	4486.65	PASS	AB=0.609;AC=6;AF=0.107;AN=56;BaseQRankSum=7.835;DP=791;FS=6.026;HRun=0;HaplotypeScore=187.5082;InbreedingCoeff=-0.1208;MQ=53.54;MQ0=8;MQRankSum=-9.149;QD=23.37;ReadPosRankSum=-0.533;VQSLOD=3.5915;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:49:78.20:0,78,2011	0/0:13,0:13:17.87:0,18,211	0/0:10,0:6:18.06:0,18,277	0/0:13,0:10:24.08:0,24,362	0/0:26,0:26:43.37:0,43,584	0/0:25,0:25:75.23:0,75,1906	0/0:17,0:17:51.17:0,51,1251	0/0:42,0:39:99:0,117,1995	0/0:29,0:29:84.76:0,85,2138	0/0:32,0:32:93.32:0,93,2607	0/0:32,0:32:96.29:0,96,2607	0/0:22,0:22:29.74:0,30,380	0/0:26,0:26:46.38:0,46,637	0/0:32,0:32:40.56:0,41,564	0/1:20,21:43:99:543,0,816	0/0:37,0:37:99:0,106,3028	0/0:15,0:22:42.82:0,43,476	0/1:4,5:11:99:258,0,148	0/0:22,0:20:60.20:0,60,1328	0/0:33,0:33:99:0,99,2527	0/0:39,0:39:99:0,109,2891	0/0:29,0:29:87.30:0,87,2172	0/0:21,0:21:57.67:0,58,1407	0/0:26,0:25:54.14:0,54,1128	0/1:20,34:57:99:980,0,646	0/1:15,21:35:99:1248,0,669	0/1:8,9:25:99:905,0,414	0/1:4,16:20:99:553,0,214
chr10	3755853	.	T	TG	5182.25	PASS	AB=0.648;AC=12;AF=0.214;AN=56;BaseQRankSum=3.548;DP=826;FS=3.968;HRun=0;HaplotypeScore=146.4825;InbreedingCoeff=0.3326;MQ=53.84;MQ0=5;MQRankSum=-6.927;QD=16.09;ReadPosRankSum=-0.033;VQSLOD=6.5416;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:24,25:48:99:401,0,503	0/0:18,0:18:36.07:0,36,446	0/0:15,0:12:36.09:0,36,475	0/0:18,0:14:42.03:0,42,556	0/0:29,0:29:54.11:0,54,721	0/0:20,0:20:60.20:0,60,839	0/0:17,0:17:51.17:0,51,710	0/1:30,21:49:99:583,0,764	0/0:29,0:29:78.32:0,78,1126	0/0:34,0:34:99:0,102,1411	0/0:31,0:31:87.27:0,87,1199	0/0:24,0:24:59.98:0,60,663	0/0:19,0:19:30.17:0,30,418	0/0:37,0:37:87.15:0,87,1026	1/1:18,25:43:64.98:1142,65,0	0/0:35,0:35:92.33:0,92,1358	0/1:8,15:22:99:353,0,174	0/1:4,5:9:23.21:76,0,23	0/0:28,0:27:78.24:0,78,1023	0/0:33,0:33:99:0,99,1364	0/0:41,0:41:99:0,120,1637	0/0:30,0:30:87.23:0,87,1177	0/0:19,0:19:57.16:0,57,760	0/0:27,0:26:27.67:0,28,527	1/1:26,28:54:4.95:905,5,0	0/1:20,20:39:99:780,0,168	0/1:10,18:28:14.81:581,0,15	1/1:16,8:24:23.29:361,23,0
chr10	3756657	.	CT	C	171.06	PASS	AB=0.852;AC=10;AF=0.179;AN=56;BaseQRankSum=11.992;DP=761;FS=5.043;HRun=3;HaplotypeScore=70.2729;InbreedingCoeff=0.0159;MQ=48.60;MQ0=59;MQRankSum=-11.431;QD=0.69;ReadPosRankSum=4.827;VQSLOD=-0.6059;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:34:14.18:0,14,821	0/0:17,1:15:42.14:0,42,604	1/1:14,1:1:2.68:11,3,0	0/1:13,0:1:0:0,0,0	0/1:25,7:27:31.36:31,0,748	0/0:23,0:21:5.04:0,5,355	0/0:29,0:26:31.74:0,32,503	0/0:36,0:14:39.08:0,39,499	0/0:31,0:30:27.27:0,27,625	0/0:36,5:33:50.86:0,51,1081	0/0:21,5:19:36.12:0,36,507	0/0:20,1:19:45.15:0,45,647	0/1:20,6:23:98.98:99,0,605	0/0:24,0:24:54.10:0,54,683	0/0:28,6:30:11.85:0,12,829	0/1:19,3:21:13.71:14,0,535	0/0:20,2:18:7.19:0,7,466	0/0:29,5:30:36.42:0,36,856	0/1:21,2:15:22.22:22,0,516	0/1:27,7:31:79.94:80,0,929	0/0:14,1:14:8.27:0,8,508	0/0:32,0:32:43.78:0,44,870	0/0:22,6:21:11.82:0,12,564	0/0:14,1:13:27.08:0,27,371	0/0:22,5:23:11.80:0,12,536	0/1:29,5:31:40.31:40,0,1038	0/1:36,7:40:3.24:3,0,1063	0/0:20,0:19:45.15:0,45,647
chr10	3757082	.	G	GTGTC	6946.06	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-4.820;DP=704;FS=5.781;HRun=0;HaplotypeScore=98.4813;InbreedingCoeff=0.9790;MQ=58.16;MQ0=26;MQRankSum=-7.684;QD=33.23;ReadPosRankSum=-0.794;VQSLOD=4.1251;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,26:29:30.10:769,30,0	0/0:7,0:7:18.06:0,18,314	0/0:19,0:15:38.96:0,39,622	0/0:21,0:18:45.11:0,45,768	0/0:15,0:15:36.12:0,36,638	0/0:22,0:21:57.20:0,57,1015	0/0:27,0:26:72.25:0,72,1260	0/0:41,0:40:84.27:0,84,1422	0/0:28,0:24:63.22:0,63,1115	0/0:34,0:33:75.21:0,75,1302	0/0:22,0:21:33.11:0,33,587	0/0:14,0:14:39.13:0,39,694	0/0:24,0:24:63.20:0,63,1092	0/0:22,0:21:57.20:0,57,1010	1/1:6,29:33:57.20:1466,57,0	0/0:24,0:23:60.21:0,60,1064	1/1:7,12:18:27.09:666,27,0	1/1:2,5:6:6.02:154,6,0	0/0:24,0:22:51.17:0,51,908	0/0:23,0:22:54.19:0,54,960	0/0:47,0:46:99:0,114,1967	0/0:25,0:24:60.16:0,60,1029	0/0:26,0:26:57.18:0,57,986	0/0:30,0:29:81.26:0,81,1394	1/1:4,14:17:21.07:541,21,0	1/1:6,25:29:21.81:1657,22,0	1/1:13,24:38:41.98:1073,42,0	1/1:6,19:24:24.08:618,24,0
chr10	3760209	.	C	CGT	702.65	PASS	AB=0.959;AC=25;AF=0.521;AN=48;BaseQRankSum=2.638;DP=578;FS=3.763;HRun=0;HaplotypeScore=98.9608;InbreedingCoeff=0.2230;MQ=71.27;MQ0=10;MQRankSum=-0.573;QD=1.85;ReadPosRankSum=-1.125;VQSLOD=1.9002;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:44,0:44:7.08:7,0,39	./.	./.	./.	0/1:17,0:17:0.04:0,0,0	0/1:15,2:17:25.71:38,0,26	0/1:17,0:17:0.03:0,0,0	./.	0/0:13,0:13:3:0,3,32	1/1:15,0:15:0.47:1,0,0	0/0:9,0:9:2.98:0,3,21	0/1:20,0:20:25.71:30,0,26	0/1:17,0:16:0.01:0,0,0	0/0:13,0:13:6.01:0,6,63	1/1:20,0:21:0.37:151,0,0	0/1:17,0:18:6.06:6,0,46	1/1:33,0:32:22.46:172,22,0	0/1:20,8:28:22.21:49,0,22	1/1:17,0:17:0.47:1,0,0	0/0:12,0:12:8.03:0,8,61	0/1:38,0:38:0:0,0,0	0/0:11,0:11:3.01:0,3,32	0/0:15,0:15:5.86:0,6,56	0/0:34,0:34:20.69:0,21,172	1/1:24,3:28:6.08:195,6,0	1/1:23,0:22:18.96:118,19,0	1/1:21,0:21:9.82:63,10,0	1/1:4,0:4:0.47:1,0,0
chr10	3761273	.	CAGAGAGAGAGAGAGAGAGAGAGAGAG	C	928.66	PASS	AB=0.656;AC=2;AF=0.036;AN=56;BaseQRankSum=4.287;DP=534;FS=3.913;HRun=0;HaplotypeScore=238.3652;InbreedingCoeff=-0.0482;MQ=44.30;MQ0=41;MQRankSum=-3.643;QD=58.04;ReadPosRankSum=-0.451;VQSLOD=2.9350;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:23:35.47:0,35,2437	0/0:3,0:3:6.02:0,6,419	0/0:4,0:1:3.01:0,3,284	0/0:5,0:1:3.01:0,3,316	0/0:27,0:24:18.95:0,19,1781	0/0:18,0:17:30.90:0,31,2995	0/0:28,0:24:43.38:0,43,3826	0/0:25,0:24:69.14:0,69,3807	0/0:19,0:16:25.91:0,26,2114	0/0:25,0:24:63.05:0,63,5837	0/0:13,0:12:9.92:0,10,1027	0/0:21,0:20:27.09:0,27,2415	0/0:16,0:17:45.14:0,45,3712	0/0:16,0:15:24.08:0,24,2145	0/0:14,0:13:23.66:0,24,1949	0/0:26,0:22:35.95:0,36,3463	0/0:38,0:34:73.56:0,74,6124	0/0:19,0:17:42.09:0,42,3192	0/0:18,0:18:44.74:0,45,2644	0/0:15,0:15:21.69:0,22,1675	0/0:47,0:43:66.70:0,67,5708	0/0:18,0:18:21.07:0,21,2243	0/0:11,0:10:18.06:0,18,1857	0/0:33,0:33:51.65:0,52,4335	0/0:25,0:25:26:0,26,2100	0/1:6,5:10:47.43:619,0,47	0/1:2,3:5:47.02:397,0,47	0/0:5,0:2:3.92:0,4,15
chr10	3761294	.	A	AG	324.49	PASS	AC=2;AF=0.037;AN=54;BaseQRankSum=1.588;DP=540;FS=12.497;HRun=1;HaplotypeScore=78.9809;InbreedingCoeff=0.7600;MQ=52.26;MQ0=37;MQRankSum=0.591;QD=11.19;ReadPosRankSum=1.890;VQSLOD=0.5521;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,23:26:33.06:419,33,0	0/0:5,0:5:12.03:0,12,139	0/0:13,0:6:12.04:0,12,150	0/0:17,0:8:17.98:0,18,185	0/0:25,0:23:27.50:0,27,297	0/0:19,0:18:37.34:0,37,437	0/0:24,0:21:42.56:0,43,503	0/0:22,0:22:63.09:0,63,751	0/0:21,0:18:36.11:0,36,460	0/0:25,0:24:72.15:0,72,864	0/0:11,0:11:15.05:0,15,193	0/0:24,0:23:39.13:0,39,497	0/0:19,0:19:54.10:0,54,646	0/0:19,0:17:36.11:0,36,454	0/0:15,0:14:27.32:0,27,245	0/0:20,0:18:38.94:0,39,466	0/0:32,0:29:72.26:0,72,689	0/0:20,0:18:44.55:0,45,417	0/0:19,0:18:51.12:0,51,616	0/0:14,0:14:30.07:0,30,355	0/0:44,0:40:66.13:0,66,810	0/0:17,0:17:26.88:0,27,322	0/0:14,0:13:30.08:0,30,372	0/0:37,0:37:72.05:0,72,854	0/0:23,0:23:26.79:0,27,256	0/0:6,0:5:6.66:0,7,21	0/0:3,0:3:4.44:0,4,15	./.
chr10	3761759	.	T	TCCATCCAC	2588.75	PASS	AB=0.884;AC=10;AF=0.179;AN=56;BaseQRankSum=11.587;DP=700;FS=2.079;HRun=0;HaplotypeScore=178.7422;InbreedingCoeff=0.5272;MQ=60.18;MQ0=6;MQRankSum=-3.521;QD=16.49;ReadPosRankSum=0.141;VQSLOD=3.1283;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:48.02:0,48,727	0/0:11,0:11:21.04:0,21,442	0/0:43,0:21:35.21:0,35,359	0/0:31,0:18:34.91:0,35,307	0/0:19,0:19:48.05:0,48,905	0/0:24,0:24:63.07:0,63,1188	0/0:36,0:36:81.12:0,81,1466	0/0:25,0:24:49.42:0,49,529	0/0:19,0:19:41.99:0,42,613	0/0:23,0:23:56.95:0,57,1014	0/0:20,0:20:41.92:0,42,655	0/0:33,0:33:90.01:0,90,1735	0/0:27,0:27:63.09:0,63,1143	0/0:25,0:25:60.04:0,60,1053	1/1:28,0:28:42.07:826,42,0	0/0:27,0:27:68.60:0,69,1273	0/1:3,17:22:10.05:257,0,10	1/1:22,0:21:53.86:655,54,0	0/0:22,0:22:41.55:0,42,629	0/0:24,0:24:56.99:0,57,885	0/0:47,0:46:90.06:0,90,1836	0/0:19,0:19:45.07:0,45,959	0/0:17,0:17:42.01:0,42,609	0/0:31,0:31:81.04:0,81,1415	1/1:32,0:32:68.30:804,68,0	0/1:26,0:26:96.73:143,0,97	0/1:17,0:17:45.91:46,0,53	0/1:10,0:10:21.14:21,0,35
chr10	3761767	.	C	CCCAT	2247.80	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=3.434;DP=693;FS=0.000;HRun=0;HaplotypeScore=122.5363;InbreedingCoeff=0.8600;MQ=57.59;MQ0=7;MQRankSum=-2.513;QD=13.79;ReadPosRankSum=2.892;VQSLOD=3.2892;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:24.03:0,24,298	0/0:9,0:9:21.07:0,21,325	0/0:41,0:19:17.98:0,18,255	0/0:34,0:19:10.89:0,11,225	0/0:18,0:18:36.07:0,36,488	0/0:24,0:24:60.19:0,60,924	0/0:35,0:35:69.15:0,69,951	0/0:31,0:29:48.07:0,48,618	0/0:17,0:17:45.13:0,45,664	0/0:22,0:22:54.14:0,54,745	0/0:17,0:17:33.08:0,33,461	0/0:33,0:33:84.24:0,84,1234	0/0:26,0:26:57.16:0,57,841	0/0:23,0:23:45.12:0,45,661	1/1:27,0:28:32.12:306,32,0	0/0:29,0:29:69.19:0,69,1016	0/1:23,0:23:74.56:77,0,75	1/1:21,0:20:25.49:190,25,0	0/0:18,0:18:33.05:0,33,406	0/0:22,0:22:54.12:0,54,743	0/0:48,0:47:96.25:0,96,1390	0/0:17,0:17:36.11:0,36,564	0/0:15,0:15:24.06:0,24,340	0/0:33,0:33:81.15:0,81,1139	1/1:33,0:33:24.25:171,24,0	1/1:7,20:27:12.40:1102,12,0	1/1:6,11:17:18.06:440,18,0	1/1:4,9:14:6.02:147,6,0
chr10	3763027	.	CCTT	C	1600.07	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.920;DP=777;FS=6.604;HRun=0;HaplotypeScore=108.2206;InbreedingCoeff=0.9981;MQ=72.78;MQ0=0;MQRankSum=-2.362;QD=38.10;ReadPosRankSum=1.653;VQSLOD=4.8463;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,41:42:99:1695,102,0	0/0:11,0:11:30.10:0,30,680	0/0:14,0:14:39.13:0,39,750	0/0:11,0:11:30.10:0,30,611	0/0:11,0:11:33.10:0,33,693	0/0:24,0:24:66.18:0,66,1420	0/0:42,0:42:99:0,123,2667	0/0:26,0:26:72.24:0,72,1576	0/0:19,0:19:57.18:0,57,1247	0/0:30,0:30:81.27:0,81,1779	0/0:12,0:12:36.12:0,36,816	0/0:40,0:40:99:0,114,2508	0/0:49,0:49:99:0,148,3327	0/0:39,0:39:99:0,111,2474	0/0:15,0:15:45.15:0,45,1020	0/0:28,0:28:81.28:0,81,1812	0/0:38,0:38:99:0,111,2424	0/0:45,0:45:99:0,132,2930	0/0:22,0:22:57.20:0,57,1273	0/0:12,0:12:36.10:0,36,753	0/0:88,0:88:99:0,259,5764	0/0:18,0:18:48.16:0,48,1032	0/0:11,0:11:33.11:0,33,743	0/0:42,0:42:99:0,126,2811	0/0:30,0:30:87.30:0,87,1963	0/0:24,0:24:66.23:0,66,1422	0/0:16,0:16:48.15:0,48,1045	0/0:18,0:18:54.18:0,54,1186
chr10	3763285	.	A	ATGACACAGTGACCAAAGACCCAGAACACTG	48790.31	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=11.972;DP=658;FS=0.000;HRun=0;HaplotypeScore=470.0486;InbreedingCoeff=0.9997;MQ=79.93;MQ0=0;MQRankSum=-18.164;QD=229.06;ReadPosRankSum=4.195;VQSLOD=3.9020;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:40,2:48:90.31:7469,90,0	0/0:12,0:12:33.11:0,33,2246	0/0:14,0:14:42.14:0,42,1864	0/0:25,0:25:66.19:0,66,2530	0/0:19,0:19:48.16:0,48,3324	0/0:11,0:10:33.11:0,33,2293	0/0:25,0:25:72.25:0,72,4620	0/0:25,0:25:66.23:0,66,3827	0/0:24,0:24:72.25:0,72,4603	0/0:24,0:24:72.24:0,72,4724	0/0:11,0:11:33.11:0,33,2183	0/0:27,0:27:69.24:0,69,4824	0/0:26,0:26:69.22:0,69,4872	0/0:22,0:22:63.22:0,63,4248	1/1:22,5:28:69.24:7400,69,0	0/0:31,0:31:75.25:0,75,5100	1/1:20,1:26:42.14:4825,42,0	1/1:14,0:14:30.10:2048,30,0	0/0:23,0:23:60.20:0,60,2952	0/0:12,0:12:36.12:0,36,2381	0/0:44,0:44:99:0,120,7357	0/0:19,0:19:51.16:0,51,3027	0/0:13,0:13:39.13:0,39,2780	0/0:38,0:38:99:0,108,6728	1/1:22,2:24:57.20:6393,57,0	1/1:24,2:27:75.26:7547,75,0	1/1:25,3:33:84.76:9622,85,0	1/1:13,0:13:36.12:3486,36,0
chr10	3764042	.	T	TC	8554.98	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-16.378;DP=743;FS=8.857;HRun=2;HaplotypeScore=68.9022;InbreedingCoeff=0.9995;MQ=85.87;MQ0=0;MQRankSum=-3.684;QD=39.06;ReadPosRankSum=3.188;VQSLOD=5.2200;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,35:35:99:1512,105,0	0/0:12,0:12:36.11:0,36,446	0/0:26,0:26:78.09:0,78,902	0/0:23,0:23:42.04:0,42,572	0/0:18,0:18:51.16:0,51,632	0/0:25,0:25:69.22:0,69,853	0/0:26,0:26:78.25:0,78,966	0/0:25,0:25:66.20:0,66,808	0/0:31,0:31:84.26:0,84,1041	0/0:26,0:26:78.25:0,78,966	0/0:16,0:16:41.52:0,42,519	0/0:42,0:42:99:0,126,1559	0/0:35,0:35:99:0,102,1263	0/0:29,0:29:87.27:0,87,1078	1/1:0,32:32:81.27:1167,81,0	0/0:29,0:29:84.25:0,84,1029	1/1:1,46:47:99:1771,123,0	1/1:0,25:25:72.24:1035,72,0	0/0:26,0:26:75.22:0,75,908	0/0:24,0:24:69.22:0,69,855	0/0:55,0:55:99:0,159,1965	0/0:21,0:21:60.18:0,60,731	0/0:8,0:8:24.08:0,24,298	0/0:27,0:27:75.22:0,75,916	1/1:1,19:20:54.18:778,54,0	1/1:2,22:24:32.03:910,32,0	1/1:2,22:24:60.67:865,61,0	1/1:0,12:12:36.12:518,36,0
chr10	3764922	.	CCCATAGGG	C	4351.30	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=10.730;DP=692;FS=0.526;HRun=0;HaplotypeScore=179.1778;InbreedingCoeff=0.9997;MQ=79.73;MQ0=0;MQRankSum=-11.974;QD=60.43;ReadPosRankSum=1.687;VQSLOD=4.8530;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:56:99:0,160,6998	0/0:12,0:12:33.11:0,33,1405	0/0:20,0:20:54.18:0,54,2053	0/0:20,0:20:54.19:0,54,2142	0/0:13,0:13:33.03:0,33,1346	0/0:18,0:18:51.17:0,51,2185	0/0:36,0:36:99:0,102,4350	0/0:20,0:20:57.17:0,57,2116	0/0:26,0:26:72.25:0,72,3106	0/0:25,0:25:69.24:0,69,2960	0/0:14,0:14:39.13:0,39,1694	0/0:33,0:33:99:0,99,4352	0/0:26,0:26:78.27:0,78,3318	0/0:28,0:28:81.26:0,81,3338	1/1:0,32:32:81.23:2224,81,0	0/0:35,0:34:96.29:0,96,4101	0/0:43,0:43:99:0,126,5239	1/1:3,17:20:36.09:955,36,0	0/0:17,0:17:48.16:0,48,2026	0/0:14,0:14:42.14:0,42,1822	0/0:30,0:30:90.31:0,90,3963	0/0:14,0:14:39.13:0,39,1713	0/0:20,0:20:60.21:0,60,2510	0/0:30,0:30:84.29:0,84,3597	1/1:2,18:20:42.14:1173,42,0	0/0:35,0:35:99:0,102,4412	0/0:21,0:21:57.20:0,57,2508	0/0:14,0:14:42.10:0,42,1535
chr10	3767831	.	GTGGGC	G	1500.66	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=8.282;DP=776;FS=3.715;HRun=0;HaplotypeScore=148.9085;InbreedingCoeff=0.9920;MQ=80.47;MQ0=0;MQRankSum=-8.606;QD=37.52;ReadPosRankSum=0.073;VQSLOD=3.6843;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:10,30:40:78.26:1596,78,0	0/0:7,0:7:18.06:0,18,564	0/0:20,0:19:51.17:0,51,1478	0/0:22,0:22:54.19:0,54,1572	0/0:21,0:21:60.19:0,60,1700	0/0:28,0:28:84.29:0,84,2595	0/0:27,0:27:81.28:0,81,2509	0/0:29,0:29:87.30:0,87,2568	0/0:25,0:25:72.25:0,72,2071	0/0:33,0:33:87.30:0,87,2650	0/0:22,0:22:63.22:0,63,1947	0/0:28,0:28:84.29:0,84,2627	0/0:30,0:30:84.29:0,84,2598	0/0:32,0:32:93.32:0,93,2857	0/0:28,0:28:78.25:0,78,2354	0/0:36,0:36:99:0,105,3275	0/0:31,0:31:87.29:0,87,2599	0/0:21,0:21:63.22:0,63,1973	0/0:33,0:33:90.31:0,90,2812	0/0:22,0:22:54.17:0,54,1586	0/0:43,0:43:99:0,123,3786	0/0:29,0:29:84.29:0,84,2573	0/0:19,0:19:54.19:0,54,1650	0/0:48,0:48:99:0,135,4071	0/0:28,0:28:84.28:0,84,2486	0/0:27,0:27:78.27:0,78,2434	0/0:34,0:34:99:0,99,2874	0/0:13,0:13:39.13:0,39,1220
chr10	3768483	.	GCGTGCGC	G	923.52	PASS	AB=0.950;AC=6;AF=0.107;AN=56;BaseQRankSum=2.312;DP=763;FS=12.296;HRun=0;HaplotypeScore=178.7255;InbreedingCoeff=0.2000;MQ=53.45;MQ0=26;MQRankSum=-1.584;QD=7.89;ReadPosRankSum=-3.481;VQSLOD=1.2391;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:32,1:30:8.05:165,8,0	0/0:14,0:14:42.09:0,42,1276	0/0:60,0:10:18.87:0,19,389	0/0:70,0:11:14.44:0,14,450	0/0:16,0:16:36.08:0,36,1059	0/0:23,0:22:63.19:0,63,1964	0/0:26,0:26:71.59:0,72,2064	0/0:21,0:20:9.98:0,10,1335	0/0:28,0:27:81.26:0,81,2476	0/0:30,0:30:56.62:0,57,2458	0/0:15,0:15:42.14:0,42,1281	0/0:24,0:24:72.20:0,72,2125	0/0:17,0:17:48.09:0,48,1487	0/0:17,0:17:48.08:0,48,1637	0/1:24,3:24:80.95:81,0,684	0/0:26,0:26:72.25:0,72,2565	0/1:22,0:19:99:210,0,274	0/1:17,0:16:99:397,0,331	0/0:14,0:13:36.12:0,36,944	0/0:12,0:11:26.98:0,27,870	0/0:86,0:83:99:0,224,6740	0/0:22,0:22:41.21:0,41,1808	0/0:22,0:22:59.71:0,60,1669	0/0:37,0:37:99:0,108,3499	0/1:16,2:17:99:195,0,220	0/0:33,0:32:14.51:0,15,2364	0/0:18,0:18:45.15:0,45,1384	0/0:14,0:14:39.09:0,39,1183
chr10	3768487	.	GCGC	G	664.48	PASS	AB=0.860;AC=6;AF=0.107;AN=56;BaseQRankSum=5.716;DP=757;FS=16.253;HRun=0;HaplotypeScore=135.1673;InbreedingCoeff=0.2098;MQ=53.09;MQ0=26;MQRankSum=-2.399;QD=5.73;ReadPosRankSum=-2.711;VQSLOD=1.4278;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:27,6:30:8.03:163,8,0	0/0:14,0:14:42.04:0,42,932	0/0:61,0:11:25.45:0,25,472	0/0:70,0:9:15.18:0,15,364	0/0:17,0:17:42.13:0,42,877	0/0:22,0:21:60.21:0,60,1440	0/0:24,0:24:69.15:0,69,1541	0/0:22,0:21:56.89:0,57,1226	0/0:27,0:26:78.26:0,78,1721	0/0:27,0:27:78.25:0,78,1756	0/0:16,0:16:45.14:0,45,939	0/0:24,0:24:72.16:0,72,1566	0/0:16,0:16:48.15:0,48,1046	0/0:17,0:17:45.15:0,45,1062	0/1:24,5:26:74.56:75,0,649	0/0:27,0:27:75.26:0,75,1790	0/1:18,3:18:99:138,0,237	0/1:12,5:16:99:282,0,276	0/0:20,0:19:51.11:0,51,1070	0/0:12,0:11:29.69:0,30,693	0/0:87,0:83:99:0,222,4824	0/0:18,0:18:54.17:0,54,1253	0/0:19,0:19:54.12:0,54,1270	0/0:34,0:34:99:0,99,2268	0/1:15,1:15:99:132,0,176	0/0:32,0:31:87.25:0,87,1918	0/0:18,0:18:45.15:0,45,1038	0/0:16,0:16:39.09:0,39,884
chr10	3768521	.	AGTGTGTGTGT	A	2021.26	PASS	AB=0.808;AC=6;AF=0.107;AN=56;BaseQRankSum=6.151;DP=754;FS=3.329;HRun=0;HaplotypeScore=217.0238;InbreedingCoeff=0.5409;MQ=51.37;MQ0=23;MQRankSum=-6.642;QD=18.54;ReadPosRankSum=0.205;VQSLOD=2.1850;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:38,0:35:6.35:6,0,18	0/0:13,0:13:27:0,27,985	0/0:13,0:5:3.01:0,3,62	0/0:21,0:6:3:0,3,27	0/0:15,0:15:30.10:0,30,1388	0/0:20,0:20:42.14:0,42,1791	0/0:25,0:26:54.64:0,55,2032	0/0:41,0:36:57.07:0,57,1171	0/0:25,0:27:45.15:0,45,1802	0/0:33,0:30:54.17:0,54,1983	0/0:15,0:16:30.10:0,30,1114	0/0:35,0:35:78.25:0,78,3111	0/0:23,0:22:57.20:0,57,2361	0/0:24,0:26:54.18:0,54,1902	0/0:29,0:33:48.14:0,48,1470	0/0:27,0:28:57.19:0,57,2327	0/0:8,0:20:14.07:0,14,79	0/0:6,0:19:27.09:0,27,944	0/0:17,0:15:24.08:0,24,759	0/0:15,0:16:36.12:0,36,1433	0/0:65,0:68:89.05:0,89,3648	0/0:32,0:33:81.26:0,81,2519	0/0:19,0:20:48.10:0,48,1938	0/0:43,0:45:99:0,99,3729	0/0:11,0:20:21.07:0,21,822	0/1:14,18:31:99:1003,0,101	1/1:8,17:25:14:870,14,0	1/1:6,7:12:12:267,12,0
chr10	3769384	.	G	GT	520.46	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.913;DP=644;FS=3.009;HRun=7;HaplotypeScore=87.2308;InbreedingCoeff=0.9109;MQ=60.20;MQ0=13;MQRankSum=-2.223;QD=14.87;ReadPosRankSum=0.414;VQSLOD=3.6777;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,27:34:57.92:615,58,0	0/0:5,0:5:9.01:0,9,87	0/0:62,0:25:46.09:0,46,491	0/0:49,0:18:22.65:0,23,167	0/0:21,0:21:53.43:0,53,494	0/0:23,0:23:57.03:0,57,535	0/0:15,0:15:33.05:0,33,318	0/0:22,0:22:35.62:0,36,342	0/0:16,0:16:39.05:0,39,376	0/0:30,0:30:77.92:0,78,753	0/0:13,0:13:20.98:0,21,202	0/0:18,0:18:51.07:0,51,488	0/0:26,0:26:58.64:0,59,554	0/0:19,0:19:45.01:0,45,420	0/0:32,0:31:80.16:0,80,759	0/0:23,0:23:54.07:0,54,521	0/0:28,0:28:65.41:0,65,633	0/0:24,0:24:60.03:0,60,561	0/0:26,0:25:45:0,45,420	0/0:17,0:17:45.07:0,45,435	0/0:8,0:8:12:0,12,110	0/0:21,0:21:51.51:0,52,479	0/0:14,0:14:41.66:0,42,384	0/0:14,0:14:35.89:0,36,347	0/0:15,0:15:32.08:0,32,294	0/0:33,0:32:81.01:0,81,768	0/0:21,0:21:47.49:0,47,442	0/0:12,0:12:30.05:0,30,289
chr10	3769393	.	TG	T	1140.85	PASS	AB=0.981;AC=13;AF=0.232;AN=56;BaseQRankSum=3.188;DP=624;FS=0.000;HRun=4;HaplotypeScore=82.6886;InbreedingCoeff=0.7263;MQ=61.41;MQ0=11;MQRankSum=1.112;QD=5.79;ReadPosRankSum=-2.450;VQSLOD=-0.7257;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:32,2:33:4.98:186,0,5	0/0:4,0:4:12.02:0,12,134	0/0:64,0:28:55.70:0,56,570	0/0:48,0:17:9.46:0,9,109	0/0:19,0:19:52.38:0,52,587	0/0:21,0:21:48.90:0,49,741	0/0:14,0:14:26.74:0,27,403	0/0:24,0:24:55.06:0,55,588	0/0:15,0:15:38.67:0,39,448	0/0:29,0:29:63.87:0,64,818	0/0:10,0:10:25.28:0,25,283	0/0:19,0:19:51.98:0,52,639	0/0:27,0:27:48.69:0,49,653	0/0:15,0:15:39.98:0,40,491	1/1:30,5:34:24.82:323,25,0	0/0:20,0:20:60.11:0,60,729	0/1:27,0:27:5.08:82,0,5	1/1:22,0:22:18.01:182,18,0	0/0:19,0:19:47.93:0,48,537	0/0:18,0:18:48.37:0,48,572	0/0:6,0:6:9.02:0,9,107	0/0:21,0:21:54.12:0,54,683	0/0:18,0:18:51.86:0,52,583	0/0:16,0:16:45.55:0,46,536	1/1:15,1:16:18.16:169,18,0	1/1:32,0:31:19.49:204,19,0	1/1:20,0:21:12.93:157,13,0	0/1:10,0:10:12.84:19,0,13
chr10	3769776	.	G	GA	7172.01	PASS	AB=0.923;AC=11;AF=0.196;AN=56;BaseQRankSum=6.821;DP=653;FS=3.324;HRun=1;HaplotypeScore=82.3195;InbreedingCoeff=0.8900;MQ=79.51;MQ0=0;MQRankSum=-1.985;QD=37.16;ReadPosRankSum=3.610;VQSLOD=5.4190;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,51:52:99:2068,138,0	0/1:11,1:12:11.79:12,0,355	0/0:16,0:16:33.02:0,33,488	0/0:24,0:24:56.35:0,56,670	0/0:20,0:20:60.16:0,60,743	0/0:22,0:22:66.19:0,66,826	0/0:25,0:25:75.24:0,75,970	0/0:16,0:16:48.16:0,48,622	0/0:18,0:18:51.10:0,51,640	0/0:18,0:18:51.15:0,51,637	0/0:11,0:11:33.11:0,33,428	0/0:31,0:31:90.29:0,90,1165	0/0:19,0:19:57.17:0,57,720	0/0:20,0:20:60.19:0,60,775	1/1:0,37:37:99:1570,105,0	0/0:18,0:18:51.14:0,51,632	1/1:0,40:40:90.30:1349,90,0	1/1:0,32:32:93.31:1376,93,0	0/0:22,0:22:66.13:0,66,801	0/0:17,0:17:51.14:0,51,632	0/0:51,0:51:99:0,147,1837	0/0:12,0:12:33.11:0,33,427	0/0:21,0:21:63.17:0,63,788	0/0:37,0:37:99:0,111,1425	1/1:0,20:20:54.18:797,54,0	0/0:24,0:24:72.21:0,72,887	0/0:13,0:13:33.11:0,33,425	0/0:5,0:5:15.05:0,15,195
chr10	3770108	.	T	TA	10278.35	PASS	AB=0.929;AC=17;AF=0.304;AN=56;BaseQRankSum=-15.328;DP=771;FS=7.061;HRun=0;HaplotypeScore=72.3451;InbreedingCoeff=0.9247;MQ=84.19;MQ0=0;MQRankSum=-4.577;QD=41.61;ReadPosRankSum=3.116;VQSLOD=5.5412;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,49:50:99:2155,135,0	0/1:12,1:13:8.81:9,0,463	0/0:29,0:29:78.23:0,78,1032	0/0:24,0:24:69.05:0,69,871	0/0:14,0:14:42.11:0,42,563	0/0:27,0:27:75.23:0,75,1030	0/0:33,0:33:99:0,99,1367	0/0:32,0:32:93.30:0,93,1272	0/0:32,0:32:84.17:0,84,1066	0/0:19,0:19:57.19:0,57,796	0/0:13,0:13:36.04:0,36,462	0/0:33,0:33:99:0,99,1331	0/0:24,0:24:72.11:0,72,943	0/0:31,0:31:90.14:0,90,1154	1/1:0,30:30:78.27:1234,78,0	0/0:31,0:31:87.22:0,87,1160	1/1:0,33:33:99:1581,99,0	1/1:0,26:26:69.24:1102,69,0	0/0:19,0:19:57.19:0,57,797	0/0:14,0:14:42.14:0,42,586	0/0:65,0:65:99:0,178,2438	0/0:21,0:21:63.01:0,63,784	0/0:26,0:26:75.18:0,75,1007	0/0:37,0:37:99:0,105,1403	1/1:1,28:29:84.28:1317,84,0	1/1:1,29:30:48.31:1301,48,0	1/1:0,28:27:75.26:1195,75,0	1/1:0,8:8:24.08:383,24,0
chr10	3773418	.	GT	G	924.39	PASS	AB=0.921;AC=13;AF=0.232;AN=56;BaseQRankSum=10.606;DP=716;FS=2.175;HRun=14;HaplotypeScore=87.1361;InbreedingCoeff=0.7280;MQ=72.36;MQ0=3;MQRankSum=-2.346;QD=4.92;ReadPosRankSum=2.949;VQSLOD=2.5274;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,22:28:63.46:422,63,0	0/0:13,0:13:11.45:0,11,219	0/0:34,2:24:15.49:0,15,118	0/1:14,0:9:2.50:2,0,6	0/1:29,5:35:18.18:18,0,547	0/0:28,0:30:71.86:0,72,637	0/0:20,3:23:21.45:0,21,321	0/0:28,1:29:43.60:0,44,508	0/0:27,1:29:51.34:0,51,607	0/0:35,0:37:74.76:0,75,643	0/0:27,2:29:43.74:0,44,575	0/0:22,1:25:36.61:0,37,451	0/0:19,0:19:31.30:0,31,384	0/0:20,0:22:44.03:0,44,426	0/0:21,2:24:33.17:0,33,412	0/0:21,0:23:59.73:0,60,524	1/1:2,21:23:46.67:314,47,0	0/0:24,3:29:15.79:0,16,517	0/1:13,2:16:11.29:11,0,180	0/0:24,0:28:50.55:0,51,431	0/0:13,0:14:38.62:0,39,314	0/0:35,0:35:89.67:0,90,783	0/0:25,1:28:31.58:0,32,419	0/0:22,1:25:32.51:0,33,507	0/0:25,0:29:26.64:0,27,349	1/1:3,0:28:49.34:144,49,0	1/1:7,0:36:54.96:161,55,0	1/1:1,0:7:10.18:30,10,0
chr10	3778218	.	A	AC	1527.39	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-7.663;DP=668;FS=28.904;HRun=6;HaplotypeScore=67.5705;InbreedingCoeff=0.9952;MQ=79.47;MQ0=0;MQRankSum=-5.303;QD=26.33;ReadPosRankSum=2.308;VQSLOD=1.8793;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,50:58:99:1622,129,0	0/0:9,0:9:21.05:0,21,214	0/0:15,0:15:39.07:0,39,391	0/0:18,0:18:44.76:0,45,415	0/0:26,0:26:72.16:0,72,733	0/0:24,0:24:66.14:0,66,673	0/0:25,0:25:66.15:0,66,673	0/0:16,0:16:36.06:0,36,360	0/0:23,0:23:63.12:0,63,634	0/0:35,0:35:90.19:0,90,916	0/0:16,0:16:45.10:0,45,458	0/0:21,0:21:57.08:0,57,570	0/0:22,0:22:63.12:0,63,633	0/0:27,0:27:72.12:0,72,718	0/0:27,0:27:69.11:0,69,693	0/0:14,0:14:30.06:0,30,306	0/0:32,0:32:87.17:0,87,880	0/0:25,0:25:69.15:0,69,703	0/0:29,0:29:62.62:0,63,624	0/0:22,0:22:60.11:0,60,603	0/0:21,0:21:54.10:0,54,543	0/0:25,0:25:69.15:0,69,702	0/0:17,0:17:48.10:0,48,488	0/0:31,0:31:75.12:0,75,754	0/0:18,0:18:51.09:0,51,511	0/0:31,0:31:84.18:0,84,857	0/0:22,0:22:57.13:0,57,580	0/0:19,0:19:51.11:0,51,520
chr10	3779813	.	GCACCACCAC	G	486.29	PASS	AC=14;AF=0.318;AN=44;BaseQRankSum=5.574;DP=330;FS=4.872;HRun=0;HaplotypeScore=87.9321;InbreedingCoeff=0.5443;MQ=77.44;MQ0=5;MQRankSum=-4.947;QD=6.23;ReadPosRankSum=0.555;VQSLOD=1.2369;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,5:18:9.03:222,9,0	0/0:3,0:3:3.01:0,3,135	./.	./.	0/0:6,0:6:6.02:0,6,271	./.	0/0:12,0:12:3.01:0,3,136	0/0:12,0:12:3.01:0,3,93	0/0:16,0:16:15.05:0,15,579	0/0:13,0:13:3.01:0,3,136	0/0:7,0:7:3.01:0,3,57	0/0:17,0:17:15.01:0,15,450	./.	0/0:9,0:9:9.03:0,9,383	1/1:6,0:12:7.47:17,7,0	./.	0/0:8,0:8:9.03:0,9,385	1/1:7,0:10:2.49:5,2,0	./.	0/0:11,0:11:18.06:0,18,543	0/0:21,0:21:27.09:0,27,1073	0/0:7,0:7:3.01:0,3,99	0/0:10,0:10:6.02:0,6,270	0/0:19,0:19:15.05:0,15,577	1/1:9,0:9:0.47:1,0,0	1/1:9,1:10:3.01:48,3,0	1/1:7,5:12:5.64:162,6,0	1/1:4,3:7:6.02:163,6,0
chr10	3780269	.	A	ATGTG	243.47	PASS	AB=0.773;AC=5;AF=0.089;AN=56;BaseQRankSum=5.765;DP=775;FS=0.000;HRun=0;HaplotypeScore=169.7631;InbreedingCoeff=0.6416;MQ=55.72;MQ0=6;MQRankSum=-6.041;QD=3.53;ReadPosRankSum=-4.782;VQSLOD=1.0131;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:45.66:0,46,693	0/0:13,0:13:36.12:0,36,657	0/0:29,0:18:38.70:0,39,493	0/0:29,0:16:35.12:0,35,580	0/0:27,0:27:75.05:0,75,1174	0/0:26,0:25:54.15:0,54,935	0/0:13,0:13:27.20:0,27,531	0/0:43,0:42:10.56:0,11,1316	0/0:34,0:34:99:0,99,1580	0/0:28,0:28:84.08:0,84,1415	0/0:16,0:16:39.13:0,39,665	0/0:29,0:29:66.17:0,66,969	0/0:33,0:33:83.98:0,84,1346	0/0:20,0:20:57.12:0,57,904	1/1:7,28:36:5.30:87,5,0	0/0:34,0:34:86.71:0,87,1571	0/0:12,0:12:24.06:0,24,354	0/1:12,4:17:24.26:231,0,24	0/0:23,0:23:63.10:0,63,1045	0/0:17,0:17:41.92:0,42,681	0/0:73,0:73:99:0,184,2927	0/0:26,0:26:72.21:0,72,1176	0/0:34,0:34:93.13:0,93,1537	0/0:41,0:41:96.19:0,96,1505	1/1:11,4:16:5.63:36,6,0	0/0:28,0:28:80.65:0,81,1230	0/0:25,0:25:50.72:0,51,741	0/0:14,0:14:27.07:0,27,442
chr10	3780271	.	ATG	A	865.05	PASS	AB=0.942;AC=19;AF=0.352;AN=54;BaseQRankSum=6.440;DP=783;FS=4.260;HRun=0;HaplotypeScore=132.6016;InbreedingCoeff=0.2280;MQ=55.43;MQ0=6;MQRankSum=0.749;QD=2.20;ReadPosRankSum=1.814;VQSLOD=2.1843;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:39:11.16:56,11,0	0/0:13,0:13:24.08:0,24,363	0/0:33,0:18:2.90:0,3,16	./.	0/0:26,1:27:2.72:0,3,417	0/1:24,0:24:9.65:10,0,294	0/1:14,0:14:15.24:15,0,165	0/0:43,0:42:47.55:0,48,390	0/1:34,0:34:15.94:16,0,635	0/0:29,0:29:36.12:0,36,544	0/1:16,1:17:17.29:17,0,220	0/1:27,1:30:1.16:1,0,445	0/0:31,2:33:29.73:0,30,770	0/0:18,1:19:2.72:0,3,408	0/0:36,0:36:23.32:0,23,134	0/1:29,4:33:6.36:6,0,731	1/1:9,0:12:8.52:42,9,0	0/0:16,0:16:18.14:0,18,134	0/1:21,2:24:53.36:53,0,287	0/0:18,0:18:33.07:0,33,435	0/1:67,6:73:19.20:19,0,838	0/1:23,2:26:52.71:53,0,383	0/0:33,2:35:26.78:0,27,779	0/0:42,0:42:54.12:0,54,745	0/0:16,0:16:13.07:0,13,105	1/1:18,10:28:32.90:337,33,0	1/1:10,13:24:23.38:247,23,0	1/1:4,10:14:15.04:167,15,0
chr10	3781617	.	TG	T	2468.09	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=6.938;DP=716;FS=4.260;HRun=3;HaplotypeScore=75.3373;InbreedingCoeff=0.9996;MQ=81.23;MQ0=0;MQRankSum=-3.543;QD=31.24;ReadPosRankSum=1.836;VQSLOD=3.7650;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,141,2021	0/0:15,0:15:45.14:0,45,623	0/0:28,0:28:72.18:0,72,979	0/0:24,1:25:63.20:0,63,882	0/0:25,0:25:69.22:0,69,973	0/0:17,0:17:39.12:0,39,543	0/0:29,0:29:81.27:0,81,1158	0/0:29,0:29:81.27:0,81,1166	0/0:27,0:27:72.24:0,72,1037	0/0:31,0:31:90.29:0,90,1276	0/0:13,0:13:36.12:0,36,512	0/0:28,0:28:66.21:0,66,933	0/0:19,0:19:51.17:0,51,731	0/0:28,0:28:78.25:0,78,1104	0/0:34,0:34:96.31:0,96,1362	0/0:21,0:21:60.16:0,60,841	0/0:32,0:32:96.30:0,96,1362	0/0:12,0:12:30.10:0,30,432	0/0:22,0:22:60.18:0,60,826	0/0:13,0:13:36.11:0,36,500	0/0:45,0:45:99:0,126,1796	0/0:29,0:29:72.23:0,72,1017	0/0:15,0:15:36.12:0,36,518	0/0:28,0:28:84.26:0,84,1168	0/0:24,0:24:72.17:0,72,992	1/1:1,31:32:93.28:1141,93,0	1/1:0,29:29:81.25:1003,81,0	1/1:1,17:18:39.08:466,39,0
chr10	3781893	.	T	TCTG	52.61	PASS	AC=2;AF=0.038;AN=52;BaseQRankSum=-0.303;DP=543;FS=9.096;HRun=0;HaplotypeScore=41.0983;InbreedingCoeff=0.2996;MQ=27.03;MQ0=129;MQRankSum=-0.376;QD=2.51;ReadPosRankSum=-1.367;VQSLOD=-0.2216;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:14,7:4:6.02:132,6,0	0/0:8,0:4:6:0,6,96	0/0:20,0:1:3.01:0,3,48	0/0:27,0:3:6.02:0,6,96	0/0:14,0:10:12.04:0,12,193	0/0:25,0:13:15.05:0,15,241	0/0:32,0:8:18.06:0,18,289	0/0:18,0:2:6.02:0,6,96	0/0:18,0:12:21.07:0,21,337	0/0:22,0:12:33.11:0,33,530	./.	0/0:21,0:12:27.09:0,27,434	0/0:23,0:11:24.08:0,24,385	0/0:21,0:13:27.05:0,27,406	0/0:14,0:7:18.06:0,18,289	0/0:10,0:5:12.04:0,12,193	0/0:20,0:2:3.01:0,3,48	./.	0/0:26,0:3:9.03:0,9,145	0/0:8,0:7:3.01:0,3,49	0/0:65,0:25:36.12:0,36,578	0/0:17,0:9:8.95:0,9,144	0/0:9,0:7:6.02:0,6,96	0/0:41,0:24:57.06:0,57,855	0/0:11,0:7:9.03:0,9,144	0/0:11,0:7:20.96:0,21,303	0/0:10,0:5:9.03:0,9,145	0/0:8,0:6:6.02:0,6,96
chr10	3787553	.	T	TA	252.06	PASS	AB=0.869;AC=10;AF=0.179;AN=56;BaseQRankSum=1.594;DP=273;FS=4.269;HRun=12;HaplotypeScore=32.3074;InbreedingCoeff=0.2925;MQ=49.62;MQ0=37;MQRankSum=-6.508;QD=4.20;ReadPosRankSum=-0.036;VQSLOD=-0.3502;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:30:64.62:0,65,463	0/0:5,0:4:5.95:0,6,44	0/0:14,0:4:8.92:0,9,63	0/0:5,0:3:1.51:0,2,19	0/0:16,0:14:26.78:0,27,197	0/0:5,0:6:7.99:0,8,50	0/1:4,0:3:0:0,0,0	0/0:15,0:11:26.81:0,27,196	0/0:6,0:6:11.92:0,12,88	0/0:11,0:11:26.83:0,27,197	0/0:10,0:9:14.90:0,15,108	0/0:6,0:5:8.95:0,9,66	0/1:1,0:1:0:0,0,0	0/0:4,0:4:10.99:0,11,72	0/1:4,2:4:13.06:34,0,13	0/0:4,0:4:8.93:0,9,64	0/0:23,0:21:35.76:0,36,262	1/1:6,4:6:12.02:117,12,0	0/0:11,0:12:26.67:0,27,185	0/0:8,0:8:14.89:0,15,108	0/0:11,0:5:8.92:0,9,66	0/1:1,1:2:8.07:8,0,16	0/0:6,0:6:5.86:0,6,44	0/0:7,0:1:2.98:0,3,22	1/1:5,5:11:23.74:203,24,0	0/1:14,1:13:13.90:14,0,108	0/1:9,1:9:11.25:11,0,91	0/0:10,0:6:2.98:0,3,22
chr10	3787572	.	T	TA	1061.49	PASS	AB=0.647;AC=13;AF=0.232;AN=56;BaseQRankSum=-1.437;DP=303;FS=3.752;HRun=9;HaplotypeScore=34.4775;InbreedingCoeff=0.7743;MQ=63.65;MQ0=13;MQRankSum=-1.698;QD=11.79;ReadPosRankSum=0.953;VQSLOD=1.8797;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:86.95:0,87,754	0/0:7,0:6:17.97:0,18,151	0/0:19,0:10:8.98:0,9,143	0/0:9,0:4:4.99:0,5,49	0/0:14,0:14:32.99:0,33,287	0/0:5,0:5:15:0,15,130	0/0:2,0:2:6:0,6,52	0/0:21,0:19:43.95:0,44,367	0/0:7,0:7:18:0,18,156	0/0:16,0:16:29.93:0,30,260	0/0:12,0:12:29.99:0,30,260	0/0:5,0:5:5.98:0,6,52	0/0:5,0:5:11.99:0,12,104	0/0:5,0:5:15:0,15,130	1/1:4,0:6:8.52:43,9,0	0/0:6,0:6:18:0,18,156	1/1:4,21:24:48.13:531,48,0	1/1:5,0:9:8.52:43,9,0	0/0:10,0:10:19.23:0,19,160	0/0:6,0:6:14.99:0,15,130	0/0:6,0:6:11.99:0,12,104	0/0:4,0:4:8.99:0,9,78	0/0:8,0:8:11.98:0,12,104	0/0:7,0:4:8.99:0,9,78	1/1:11,0:13:14.81:81,15,0	1/1:6,5:10:15.04:166,15,0	0/1:5,6:11:5:178,0,5	1/1:3,8:10:18.05:199,18,0
chr10	3789881	.	ACC	A	2151	PASS	AB=0.558;AC=7;AF=0.125;AN=56;BaseQRankSum=4.969;DP=520;FS=0.000;HRun=9;HaplotypeScore=73.9773;InbreedingCoeff=0.7281;MQ=85.93;MQ0=2;MQRankSum=-2.017;QD=26.23;ReadPosRankSum=1.657;VQSLOD=3.4229;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:84.12:0,84,1196	0/0:7,0:7:18.06:0,18,295	0/0:15,0:15:38.27:0,38,586	0/0:24,0:24:68.86:0,69,842	0/0:10,0:10:24.08:0,24,386	0/0:13,0:13:36.12:0,36,588	0/0:23,0:23:63.22:0,63,1027	0/0:18,0:18:42.11:0,42,600	0/0:20,0:20:54.17:0,54,858	0/0:13,0:13:30.57:0,31,468	0/0:13,0:13:30.10:0,30,478	0/0:18,0:18:54.13:0,54,830	0/0:18,0:18:51.17:0,51,825	0/0:18,0:18:39.12:0,39,616	0/0:27,0:27:56.95:0,57,485	0/0:24,0:24:69.19:0,69,1095	1/1:3,25:28:66.19:769,66,0	0/0:16,1:17:0.16:0,0,244	0/0:12,0:12:21.06:0,21,318	0/0:14,0:14:39.13:0,39,638	0/0:43,0:42:99:0,102,1663	0/0:17,0:17:42.13:0,42,637	0/0:7,0:7:18.04:0,18,244	0/0:15,0:16:38.62:0,39,599	0/0:14,0:14:32.97:0,33,280	0/1:5,19:24:26.29:685,0,26	1/1:2,26:27:66.16:768,66,0	1/1:0,2:2:6.02:70,6,0
chr10	3789883	.	C	CCCA	2482.65	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-9.031;DP=521;FS=0.573;HRun=0;HaplotypeScore=91.0252;InbreedingCoeff=0.9438;MQ=88.56;MQ0=2;MQRankSum=-1.726;QD=40.70;ReadPosRankSum=3.724;VQSLOD=4.8285;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:87.10:0,87,1280	0/0:7,0:7:18.06:0,18,307	0/0:17,0:17:38.06:0,38,563	0/0:26,0:26:68.44:0,68,851	0/0:11,0:11:27.07:0,27,406	0/0:15,0:15:36.12:0,36,608	0/0:23,0:23:69.20:0,69,1118	0/0:18,0:18:48.09:0,48,616	0/0:20,0:20:57.17:0,57,915	0/0:16,0:16:32.12:0,32,470	0/0:12,0:12:30.08:0,30,443	0/0:19,0:19:57.16:0,57,883	0/0:17,0:17:51.17:0,51,861	0/0:17,0:17:45.11:0,45,688	1/1:1,25:28:60.07:1209,60,0	0/0:23,0:23:69.19:0,69,1134	0/0:26,0:26:66.03:0,66,585	1/1:1,17:18:12.54:715,13,0	0/0:10,0:10:24.04:0,24,349	0/0:16,0:16:39.13:0,39,660	0/0:41,0:40:99:0,114,1809	0/0:18,0:18:50.98:0,51,699	0/0:7,0:7:14.74:0,15,229	0/0:15,0:15:42.13:0,42,669	1/1:2,13:15:33.10:698,33,0	0/0:26,0:26:46.68:0,47,636	0/0:28,0:27:72.02:0,72,635	0/0:2,0:2:6:0,6,53
chr10	3790043	.	T	TA	4339.93	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-6.193;DP=519;FS=3.439;HRun=7;HaplotypeScore=56.5282;InbreedingCoeff=0.9879;MQ=91.35;MQ0=0;MQRankSum=-2.041;QD=27.64;ReadPosRankSum=1.752;VQSLOD=5.6975;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,27:30:57.17:688,57,0	0/0:6,0:6:15.02:0,15,145	0/0:23,0:23:59.82:0,60,523	0/0:20,0:20:47.51:0,48,428	0/0:18,0:18:48.07:0,48,461	0/0:16,0:16:42.07:0,42,406	0/0:20,0:20:57.04:0,57,533	0/0:20,0:20:54.08:0,54,517	0/0:16,0:16:45.05:0,45,427	0/0:20,0:20:48.06:0,48,463	0/0:12,0:12:33.04:0,33,315	0/0:17,0:17:48.04:0,48,452	0/0:18,0:18:50.30:0,50,470	0/0:19,0:19:54.08:0,54,521	1/1:1,15:16:42.13:507,42,0	0/0:18,0:18:48.06:0,48,458	1/1:7,19:26:69.13:812,69,0	1/1:7,14:21:27.08:326,27,0	0/0:13,0:13:33.04:0,33,313	0/0:10,0:10:27.04:0,27,261	0/0:36,0:37:95.54:0,96,918	0/0:13,0:13:27.04:0,27,261	0/0:7,0:7:15.02:0,15,145	0/0:39,0:39:99:0,108,1048	1/1:0,12:12:33.10:399,33,0	1/1:4,21:25:11.33:702,11,0	1/1:2,15:17:45.14:544,45,0	1/1:0,10:10:30.09:362,30,0
chr10	3790089	.	CGT	C	640.96	PASS	AB=0.928;AC=17;AF=0.340;AN=50;BaseQRankSum=3.354;DP=549;FS=1.404;HRun=0;HaplotypeScore=88.9682;InbreedingCoeff=0.0792;MQ=70.19;MQ0=11;MQRankSum=0.517;QD=2.66;ReadPosRankSum=0.389;VQSLOD=1.2742;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:26:6.92:0,7,38	0/0:13,0:13:0.33:0,0,231	./.	./.	0/1:8,1:8:24.14:24,0,81	1/1:6,0:12:2.84:14,3,0	0/1:25,1:28:11.26:11,0,380	1/1:22,0:27:11.89:50,12,0	0/0:7,0:11:12:0,12,105	0/0:20,0:20:1.57:0,2,230	0/0:13,0:13:24.08:0,24,348	0/1:16,0:16:36.06:36,0,329	0/1:18,4:22:36.22:36,0,329	0/1:15,2:17:39.25:39,0,279	0/0:24,0:27:14.99:0,15,130	0/0:11,0:11:18.21:0,18,312	0/0:21,0:28:45.06:0,45,496	0/0:20,0:22:24.40:0,24,239	0/1:15,1:15:24.14:24,0,81	0/0:8,0:8:9.03:0,9,130	0/0:47,1:48:43:0,43,732	0/0:12,0:12:12.04:0,12,177	0/1:5,0:5:14.04:14,0,159	0/1:41,1:43:7.68:8,0,658	./.	0/1:18,2:19:22.18:152,0,22	1/1:11,4:17:23.73:226,24,0	1/1:2,5:7:15.04:166,15,0
chr10	3790125	.	T	TGCGC	406.25	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=5.513;DP=541;FS=7.435;HRun=0;HaplotypeScore=110.4642;InbreedingCoeff=0.2992;MQ=54.07;MQ0=22;MQRankSum=-0.242;QD=4.42;ReadPosRankSum=-0.101;VQSLOD=1.6619;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:20,7:25:29.73:456,30,0	0/0:11,0:11:30.05:0,30,456	0/0:11,0:1:2.88:0,3,15	0/0:22,0:6:10.62:0,11,76	0/0:9,0:8:24.08:0,24,398	0/0:14,0:14:27.08:0,27,394	0/0:31,0:31:78.69:0,79,1239	0/0:24,0:23:51.52:0,52,773	0/1:17,0:17:4.78:5,0,487	0/0:17,0:17:28.62:0,29,740	0/0:15,0:15:39.12:0,39,678	0/0:17,0:17:39.30:0,39,654	0/0:19,0:19:45.15:0,45,775	0/0:19,0:19:48.15:0,48,788	0/1:25,0:25:48.31:48,0,217	0/0:17,0:17:47.95:0,48,825	0/0:31,0:31:65.34:0,65,734	0/1:23,0:21:13.72:14,0,404	0/0:11,0:11:30.57:0,31,476	0/0:11,0:11:15.05:0,15,279	0/0:55,0:52:99:0,119,1908	0/0:14,0:14:30.10:0,30,518	0/0:14,0:13:30.10:0,30,512	0/0:39,0:39:92.87:0,93,1578	0/0:8,0:8:9.01:0,9,121	0/0:19,0:19:36.86:0,37,592	0/0:15,0:15:45.14:0,45,601	0/0:6,0:5:5.49:0,5,137
chr10	3791837	.	GA	G	207.35	PASS	AB=0.926;AC=20;AF=0.357;AN=56;BaseQRankSum=10.344;DP=633;FS=3.229;HRun=14;HaplotypeScore=102.4402;InbreedingCoeff=0.4381;MQ=71.09;MQ0=11;MQRankSum=-7.408;QD=0.67;ReadPosRankSum=5.170;VQSLOD=-0.4454;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:24:16.28:47,16,0	0/0:10,1:12:4.43:0,4,159	0/1:59,1:27:3.67:4,0,98	0/0:49,0:17:2.12:0,2,65	0/1:27,4:32:7.50:8,0,475	0/0:14,0:14:31.27:0,31,278	0/0:9,0:9:17.97:0,18,158	0/0:31,2:33:44.61:0,45,478	0/0:11,0:11:32.98:0,33,293	0/0:25,3:29:9.13:0,9,393	0/0:23,1:23:15.41:0,15,308	0/0:15,1:16:14.78:0,15,253	0/0:15,1:17:19.68:0,20,320	0/0:21,0:21:37.63:0,38,311	1/1:14,0:14:14.21:41,14,0	0/0:19,2:22:2.68:0,3,304	1/1:31,0:31:15.12:43,15,0	1/1:13,0:13:6.78:34,7,0	0/1:21,2:24:11.29:11,0,177	0/0:25,4:30:20.62:0,21,417	0/1:16,2:18:8.24:8,0,195	0/0:19,1:20:27.28:0,27,373	0/0:13,0:14:38.87:0,39,345	0/1:20,2:23:37.80:38,0,233	1/1:18,0:18:13.62:43,14,0	0/1:29,0:31:12.59:65,0,13	1/1:17,0:19:14.88:43,15,0	1/1:3,0:3:2.04:6,2,0
chr10	3791841	.	AAAAAAAAAAAC	A	3543.44	PASS	AB=0.990;AC=13;AF=0.232;AN=56;BaseQRankSum=11.272;DP=623;FS=2.188;HRun=0;HaplotypeScore=191.0235;InbreedingCoeff=0.6437;MQ=66.97;MQ0=11;MQRankSum=-10.981;QD=23.31;ReadPosRankSum=5.161;VQSLOD=2.6660;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:2,21:23:27.01:762,27,0	0/0:12,0:12:30.10:0,30,1327	0/0:59,0:24:43.77:0,44,607	0/0:50,0:15:21.07:0,21,509	0/0:33,0:33:96.31:0,96,4406	0/0:16,0:16:42.14:0,42,2033	0/0:9,0:9:21.07:0,21,1086	0/0:32,0:32:81.89:0,82,3165	0/0:11,0:11:33.11:0,33,1749	0/0:30,0:30:87.29:0,87,3695	0/0:21,0:20:54.39:0,54,2215	0/0:15,0:15:36.55:0,37,1540	0/0:17,0:17:48.15:0,48,2122	0/0:17,0:17:39.13:0,39,1833	0/1:15,0:15:26.81:212,0,27	0/0:21,0:20:57.20:0,57,2763	1/1:5,23:28:29.91:707,30,0	1/1:13,0:13:10.68:257,11,0	0/0:24,0:24:51.15:0,51,2384	0/0:32,0:32:87.14:0,87,3955	0/0:18,0:18:45.15:0,45,2091	0/0:17,0:17:48.16:0,48,2429	0/0:15,0:15:42.14:0,42,1972	0/0:22,0:22:57.09:0,57,2100	0/1:18,0:18:51.58:177,0,52	0/1:31,1:32:99:932,0,263	1/1:19,1:20:13.64:443,14,0	1/1:3,0:3:3.01:54,3,0
chr10	3791842	.	AAAAAAAAAAC	A	4133.90	PASS	AB=0.846;AC=13;AF=0.232;AN=56;BaseQRankSum=11.530;DP=629;FS=0.964;HRun=0;HaplotypeScore=179.9532;InbreedingCoeff=0.6572;MQ=66.21;MQ0=11;MQRankSum=-9.969;QD=27.74;ReadPosRankSum=5.183;VQSLOD=3.1622;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:23:27.02:565,27,0	0/0:12,0:12:30.10:0,30,1185	0/0:59,0:24:46.82:0,47,599	0/0:51,0:16:23.70:0,24,482	0/0:34,0:34:99:0,99,4068	0/0:16,0:16:42.14:0,42,1835	0/0:9,0:9:21.07:0,21,988	0/0:32,0:32:81.55:0,82,2849	0/0:11,0:11:33.11:0,33,1593	0/0:32,0:32:93.27:0,93,3447	0/0:22,0:21:56.54:0,57,2054	0/0:15,0:15:36.08:0,36,1385	0/0:17,0:17:48.16:0,48,1910	0/0:16,0:16:38.92:0,39,1647	0/1:13,1:14:22.39:328,0,22	0/0:22,0:21:60.21:0,60,2599	1/1:26,0:26:29.81:529,30,0	1/1:14,0:14:11.42:371,11,0	0/0:26,0:26:57.20:0,57,2388	0/0:32,0:32:87.14:0,87,3551	0/0:18,0:18:48.16:0,48,1942	0/0:17,0:17:48.16:0,48,2204	0/0:17,0:17:48.16:0,48,1972	0/0:22,0:22:53.52:0,54,1838	0/1:18,0:18:12.47:279,0,12	0/1:11,21:32:99:1421,0,221	1/1:5,14:19:27.43:554,27,0	1/1:0,3:3:3.01:86,3,0
chr10	3791843	.	AAAAAAAAAC	A	4179.93	PASS	AB=0.969;AC=15;AF=0.268;AN=56;BaseQRankSum=11.662;DP=622;FS=1.495;HRun=0;HaplotypeScore=167.6096;InbreedingCoeff=0.8692;MQ=65.57;MQ0=11;MQRankSum=-10.614;QD=28.83;ReadPosRankSum=4.834;VQSLOD=3.4208;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:22:27.03:518,27,0	0/0:12,0:12:30.10:0,30,1042	0/0:58,0:23:36.03:0,36,431	0/0:51,0:16:20.58:0,21,407	0/0:34,0:34:96.31:0,96,3595	0/0:16,0:16:42.14:0,42,1639	0/0:9,0:9:21.07:0,21,890	0/0:33,0:33:87.94:0,88,2628	0/0:11,0:11:33.11:0,33,1436	0/0:32,0:32:90.25:0,90,3038	0/0:23,0:22:60.37:0,60,1863	0/0:15,0:15:36.08:0,36,1219	0/0:17,0:17:48.15:0,48,1692	0/0:16,0:16:38.86:0,39,1467	1/1:5,8:13:20.51:499,21,0	0/0:20,0:19:60.21:0,60,2326	1/1:25,0:25:29.36:482,29,0	1/1:1,13:14:13.20:617,13,0	0/0:26,0:26:60.21:0,60,2186	0/0:31,0:31:81.19:0,81,3150	0/0:17,0:17:48.12:0,48,1710	0/0:17,0:17:48.16:0,48,1976	0/0:18,0:18:51.17:0,51,1829	0/0:21,0:21:54.26:0,54,1624	1/1:4,14:18:26.79:564,27,0	0/1:30,1:31:99:990,0,197	1/1:19,0:19:28.40:447,28,0	1/1:3,0:3:3.01:63,3,0
chr10	3793093	.	GA	G	367.14	PASS	AB=0.915;AC=5;AF=0.089;AN=56;BaseQRankSum=5.868;DP=573;FS=2.057;HRun=10;HaplotypeScore=86.0190;InbreedingCoeff=0.2881;MQ=74.91;MQ0=0;MQRankSum=0.246;QD=3.91;ReadPosRankSum=0.720;VQSLOD=0.7058;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:19,16:38:59.97:456,60,0	0/0:14,0:14:16.60:0,17,363	0/1:21,1:18:9.72:10,0,185	0/0:19,0:18:28.96:0,29,247	0/0:20,0:20:45.02:0,45,472	0/0:18,0:18:39.08:0,39,410	0/1:15,2:17:6.99:7,0,386	0/0:30,1:31:43.11:0,43,682	0/1:15,2:17:7:7,0,378	0/0:28,0:28:60.16:0,60,658	0/0:10,0:10:27.07:0,27,298	0/0:26,0:26:71.68:0,72,772	0/0:15,0:16:41.89:0,42,432	0/0:21,1:23:33.92:0,34,571	0/0:15,0:15:19.28:0,19,94	0/0:19,1:20:31.06:0,31,547	0/0:15,1:16:0.50:0,0,130	0/0:14,0:14:22.04:0,22,217	0/0:29,0:29:46.39:0,46,712	0/0:24,1:25:31.08:0,31,557	0/0:21,0:22:65.98:0,66,693	0/0:21,0:21:44.91:0,45,477	0/0:22,3:25:15.30:0,15,607	0/0:30,4:35:8.90:0,9,762	0/0:17,0:17:21.77:0,22,263	0/0:16,0:17:36.66:0,37,236	0/0:14,0:15:5.49:0,5,34	0/0:3,0:3:8.80:0,9,54
chr10	3793103	.	A	AAGG	1108.33	PASS	AB=0.859;AC=10;AF=0.179;AN=56;BaseQRankSum=8.396;DP=577;FS=0.000;HRun=0;HaplotypeScore=110.2230;InbreedingCoeff=0.7022;MQ=73.52;MQ0=0;MQRankSum=-3.351;QD=9.24;ReadPosRankSum=-7.920;VQSLOD=0.4547;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:33:56.99:57,0,61	0/0:14,0:14:41.60:0,42,597	0/0:22,0:18:40.07:0,40,544	0/0:18,0:17:9.25:0,9,481	0/0:18,0:18:54.12:0,54,795	0/0:19,0:19:51.11:0,51,749	0/0:16,0:16:48.16:0,48,738	0/0:27,0:27:79.79:0,80,1186	0/0:18,0:18:54.17:0,54,811	0/0:25,0:25:69.22:0,69,1099	0/0:9,0:9:27.09:0,27,438	0/0:26,0:26:78:0,78,1218	0/0:16,0:16:43.11:0,43,662	0/0:21,0:21:62.91:0,63,917	1/1:4,1:17:21.94:300,22,0	0/0:20,0:20:60.15:0,60,895	0/0:7,0:17:14.16:0,14,104	0/0:2,0:20:6.06:0,6,31	0/0:27,0:27:78.15:0,78,1175	0/0:20,0:20:59.87:0,60,895	0/0:26,0:26:74.90:0,75,1066	0/0:17,0:17:48.14:0,48,745	0/0:28,0:28:74.37:0,74,1153	0/0:33,0:33:92.98:0,93,1367	0/1:14,0:23:9.86:315,0,10	1/1:2,15:24:47.08:387,47,0	1/1:3,8:20:8.80:86,9,0	1/1:1,0:3:8.99:125,9,0
chr10	3796796	.	C	CT	932.16	PASS	AB=0.901;AC=17;AF=0.304;AN=56;BaseQRankSum=7.933;DP=583;FS=19.573;HRun=12;HaplotypeScore=98.4905;InbreedingCoeff=0.5514;MQ=62.56;MQ0=4;MQRankSum=-4.991;QD=5.27;ReadPosRankSum=-4.746;VQSLOD=-0.6164;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:33,0:30:23.79:109,24,0	0/1:6,1:7:14.27:14,0,70	0/0:12,0:9:2.33:0,2,36	0/1:8,0:8:0.95:1,0,20	0/0:23,0:23:17.60:0,18,253	0/0:14,0:14:19.90:0,20,151	0/0:19,1:21:15.03:0,15,277	0/0:38,1:42:28.09:0,28,495	0/1:14,2:16:1.61:2,0,148	0/0:21,1:23:11.59:0,12,239	0/0:21,0:21:41.65:0,42,306	0/0:28,0:28:50.53:0,51,357	0/0:23,0:25:4.17:0,4,112	0/0:25,0:25:44.57:0,45,326	1/1:12,0:23:42.66:235,43,0	0/0:19,0:20:40.72:0,41,288	0/0:5,0:28:16.58:0,17,77	1/1:6,1:11:14.56:95,15,0	0/0:23,1:24:23.57:0,24,326	0/1:12,2:14:37.58:38,0,86	0/0:27,0:29:63.63:0,64,449	0/0:19,1:20:4.92:0,5,206	0/0:14,0:14:23.07:0,23,174	0/0:33,1:34:35.30:0,35,414	1/1:11,0:19:33.78:171,34,0	0/1:11,0:13:20.13:114,0,20	1/1:8,14:22:32.79:286,33,0	1/1:4,0:5:8.22:51,8,0
chr10	3798571	.	G	GA	4254.97	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-13.275;DP=697;FS=3.608;HRun=2;HaplotypeScore=66.3231;InbreedingCoeff=0.9996;MQ=84.86;MQ0=0;MQRankSum=-1.466;QD=38.68;ReadPosRankSum=2.551;VQSLOD=5.6038;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,117,1519	0/0:9,0:9:27.09:0,27,350	0/0:28,0:28:71.94:0,72,905	0/0:18,0:18:54.07:0,54,668	0/0:26,0:26:75.23:0,75,957	0/0:18,0:18:54.16:0,54,686	0/0:29,0:29:87.28:0,87,1129	0/0:40,0:40:99:0,117,1506	0/0:20,0:20:51.17:0,51,662	0/0:30,0:30:90.28:0,90,1156	0/0:12,0:12:33.11:0,33,428	0/0:35,0:35:93.30:0,93,1207	0/0:24,0:24:72.23:0,72,933	0/0:24,0:24:72.22:0,72,921	1/1:1,24:25:72.24:1079,72,0	0/0:27,0:27:75.24:0,75,973	1/1:2,32:34:87.29:1303,87,0	1/1:0,23:23:60.20:899,60,0	0/0:23,0:23:66.18:0,66,837	0/0:25,0:25:75.24:0,75,973	0/0:27,0:27:78.23:0,78,996	0/0:28,0:28:81.23:0,81,1021	0/0:29,0:29:87.28:0,87,1130	0/0:17,0:17:51.17:0,51,662	1/1:3,24:28:66.22:973,66,0	0/0:23,0:23:66.21:0,66,842	0/0:25,0:25:75.24:0,75,972	0/0:11,0:11:33.09:0,33,413
chr10	3798704	.	GGGACTGA	G	3792.38	PASS	AB=0.521;AC=5;AF=0.089;AN=56;BaseQRankSum=9.805;DP=752;FS=18.808;HRun=0;HaplotypeScore=176.0624;InbreedingCoeff=0.7266;MQ=88.30;MQ0=0;MQRankSum=-10.994;QD=57.46;ReadPosRankSum=2.811;VQSLOD=2.6090;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,147,5402	0/0:16,0:16:48.15:0,48,1807	0/0:31,0:31:85.91:0,86,2632	0/0:29,0:29:81.16:0,81,2510	0/0:20,0:20:59.79:0,60,2270	0/0:17,0:17:51.13:0,51,1868	0/0:25,0:25:69.24:0,69,2675	0/0:29,0:29:87.28:0,87,3042	0/0:27,0:27:81.26:0,81,3034	0/0:36,0:36:99:0,105,3605	0/0:18,0:18:48.16:0,48,1796	0/0:36,0:36:99:0,108,4010	0/0:17,0:17:51.14:0,51,1729	0/0:27,0:27:78.74:0,79,2985	0/0:40,0:40:99:0,120,4265	0/0:23,0:23:66.23:0,66,2423	0/0:30,0:30:90.29:0,90,3372	0/0:22,0:22:66.21:0,66,2509	0/0:23,0:23:60.20:0,60,2247	0/0:28,0:28:81.24:0,81,2820	0/0:27,0:27:81.28:0,81,3083	0/0:33,0:33:93.32:0,93,3665	0/0:19,0:19:54.18:0,54,2146	0/0:32,0:32:93.28:0,93,3326	0/0:30,0:29:87.25:0,87,2985	0/1:2,23:25:47.37:1636,0,47	1/1:0,34:35:78.74:1998,79,0	1/1:0,6:6:6.02:158,6,0
chr10	3800327	.	A	AG	3740.35	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-13.492;DP=751;FS=0.000;HRun=0;HaplotypeScore=71.5830;InbreedingCoeff=0.9976;MQ=81.13;MQ0=0;MQRankSum=0.932;QD=43.49;ReadPosRankSum=1.418;VQSLOD=4.0407;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,99,1339	0/0:10,0:10:30.10:0,30,419	0/0:24,0:24:67.14:0,67,862	0/0:16,0:16:41.16:0,41,519	0/0:15,0:15:44.34:0,44,574	0/0:21,0:21:60.18:0,60,817	0/0:28,0:28:81.27:0,81,1132	0/0:27,0:27:78.26:0,78,1091	0/0:38,0:38:99:0,111,1551	0/0:26,0:26:78.23:0,78,1041	0/0:19,0:19:53.39:0,53,720	0/0:36,0:36:99:0,108,1458	0/0:37,0:37:99:0,108,1488	0/0:43,0:43:99:0,129,1757	1/1:0,36:36:99:1726,108,0	0/0:30,0:30:90.28:0,90,1240	0/0:42,0:42:99:0,120,1620	1/1:3,29:32:84.29:1343,84,0	0/0:16,0:16:48.14:0,48,641	0/0:14,0:14:42.14:0,42,587	0/0:78,0:78:99:0,235,3214	0/0:13,0:13:39.13:0,39,545	0/0:8,0:8:24.08:0,24,333	0/0:35,0:35:99:0,105,1451	1/1:0,18:18:42.14:671,42,0	0/0:21,0:21:60.20:0,60,835	0/0:26,0:26:75.24:0,75,1031	0/0:7,0:7:21.07:0,21,294
chr10	3801249	.	AGTGGGACCATC	A	2297.63	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.370;DP=760;FS=10.109;HRun=0;HaplotypeScore=240.0574;InbreedingCoeff=0.9960;MQ=85.65;MQ0=0;MQRankSum=-7.972;QD=74.12;ReadPosRankSum=-1.287;VQSLOD=1.9371;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,31:31:69.24:2393,69,0	0/0:14,0:14:42.14:0,42,2485	0/0:28,0:28:81.24:0,81,4172	0/0:23,0:23:69.07:0,69,3336	0/0:28,0:28:81.28:0,81,4682	0/0:22,0:22:66.23:0,66,3556	0/0:25,0:25:51.26:0,51,3760	0/0:32,0:31:96.33:0,96,5306	0/0:25,0:25:75.26:0,75,3982	0/0:33,0:33:99:0,99,5350	0/0:31,0:31:93.32:0,93,5306	0/0:29,0:29:87.28:0,87,4772	0/0:39,0:39:99:0,117,6769	0/0:23,0:23:69.24:0,69,4090	0/0:40,0:40:99:0,120,5996	0/0:25,0:25:75.26:0,75,4313	0/0:35,0:35:99:0,105,5908	0/0:29,0:29:87.28:0,87,4005	0/0:26,0:26:78.27:0,78,4115	0/0:34,0:34:99:0,102,5611	0/0:23,0:23:69.24:0,69,3951	0/0:26,0:26:75.26:0,75,4423	0/0:24,0:24:69.24:0,69,4051	0/0:31,0:31:93.32:0,93,5433	0/0:17,0:17:51.18:0,51,2512	0/0:26,0:26:78.27:0,78,4283	0/0:34,0:34:99:0,102,5838	0/0:7,0:7:21.07:0,21,1245
chr10	3805605	.	TG	T	2149.42	PASS	AB=0.782;AC=38;AF=0.704;AN=54;BaseQRankSum=-2.565;DP=448;FS=15.731;HRun=12;HaplotypeScore=70.1867;InbreedingCoeff=0.5255;MQ=81.28;MQ0=0;MQRankSum=-0.279;QD=6.18;ReadPosRankSum=7.995;VQSLOD=-0.0064;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:4.68:0,5,10	1/1:11,2:14:10.04:73,10,0	0/0:16,0:13:2.94:0,3,54	0/0:18,0:16:13.94:0,14,96	1/1:13,2:17:18.03:109,18,0	1/1:5,6:13:24.02:157,24,0	1/1:12,16:29:49.75:376,50,0	0/1:11,1:16:0:0,0,0	0/1:14,1:17:23.83:52,0,24	1/1:9,4:15:13.01:81,13,0	1/1:11,1:13:5.01:29,5,0	1/1:10,9:19:23.11:184,23,0	0/1:7,10:18:0.14:124,0,0	1/1:8,8:17:18.96:128,19,0	1/1:14,1:15:9.25:41,9,0	0/1:9,5:15:26.16:99,0,26	0/0:27,0:27:23.21:0,23,133	1/1:8,0:8:9.15:27,9,0	1/1:7,3:10:11.92:93,12,0	1/1:5,3:8:5.95:46,6,0	1/1:16,15:31:2.19:179,2,0	1/1:9,6:15:14.91:116,15,0	1/1:3,6:11:19.44:124,19,0	1/1:19,11:31:34.23:261,34,0	1/1:16,0:16:4.73:14,5,0	./.	0/0:11,0:11:9.42:0,9,68	0/0:10,0:10:5.09:0,5,20
chr10	3805615	.	GGGC	G	890.59	PASS	AB=1.000;AC=10;AF=0.179;AN=56;BaseQRankSum=-1.236;DP=464;FS=7.208;HRun=0;HaplotypeScore=84.6826;InbreedingCoeff=0.6534;MQ=75.68;MQ0=0;MQRankSum=-0.183;QD=10.60;ReadPosRankSum=-2.398;VQSLOD=2.0867;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:14,0:14:15.34:82,0,15	0/0:13,0:13:7.19:0,7,258	0/0:15,0:12:1.49:0,1,89	0/0:15,0:12:17.06:0,17,158	0/0:13,0:13:17.14:0,17,241	0/0:17,0:17:46.71:0,47,411	0/0:28,0:28:74.73:0,75,666	0/0:24,0:24:47.57:0,48,366	0/0:23,0:23:34.05:0,34,574	0/0:13,0:13:38.10:0,38,312	0/0:11,0:11:23.47:0,23,177	0/0:18,0:18:47.61:0,48,453	0/0:20,0:20:42.62:0,43,408	0/0:15,0:15:14.37:0,14,278	1/1:16,6:22:40.73:389,41,0	0/0:16,0:16:44.37:0,44,486	0/0:20,0:20:46.24:0,46,730	1/1:11,3:14:38.70:389,39,0	0/0:13,0:13:15.70:0,16,292	0/0:8,0:8:20.79:0,21,211	0/0:41,0:41:89.34:0,89,825	0/0:13,0:13:23.44:0,23,208	0/0:10,0:10:19.34:0,19,139	0/0:21,0:21:62.23:0,62,626	1/1:4,13:17:8.67:115,9,0	1/1:10,0:10:8.27:64,8,0	0/0:13,0:13:9.35:0,9,81	0/1:7,0:7:11.34:11,0,39
chr10	3805618	.	C	CG	329.40	PASS	AB=0.780;AC=8;AF=0.143;AN=56;BaseQRankSum=-1.187;DP=476;FS=16.040;HRun=12;HaplotypeScore=74.6665;InbreedingCoeff=0.5743;MQ=74.33;MQ0=0;MQRankSum=1.703;QD=5.40;ReadPosRankSum=-1.683;VQSLOD=0.2667;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:13:4.57:45,5,0	0/0:13,0:13:29.89:0,30,325	0/1:12,1:10:12.47:12,0,97	0/0:13,0:10:14.44:0,14,114	0/0:13,0:13:39.03:0,39,411	0/0:18,0:18:51.11:0,51,588	0/0:30,0:30:84.23:0,84,975	0/0:27,0:27:51.14:0,51,623	0/0:23,0:23:49.72:0,50,589	0/0:16,0:16:42.11:0,42,504	0/0:11,0:11:24.05:0,24,284	0/0:18,0:18:48.09:0,48,532	0/0:18,0:18:42.10:0,42,488	0/0:16,0:16:41.98:0,42,450	0/0:21,0:21:7.29:0,7,29	0/0:18,0:18:45.14:0,45,543	0/0:20,0:20:47.99:0,48,412	0/0:14,0:14:10.22:0,10,29	0/0:13,0:13:38.89:0,39,416	0/0:8,0:8:21.06:0,21,247	0/0:43,0:43:90.26:0,90,1093	0/0:13,0:13:27.49:0,27,296	0/0:11,0:11:21.39:0,21,225	0/0:21,0:21:63.15:0,63,708	0/0:17,0:17:5.70:0,6,16	0/1:5,7:12:20.10:157,0,20	1/1:2,12:14:9.01:134,9,0	1/1:2,7:9:9.03:115,9,0
chr10	3805933	.	GTGCACATGCACATGCACA	G	1456.28	PASS	AB=0.795;AC=12;AF=0.240;AN=50;BaseQRankSum=7.296;DP=668;FS=0.000;HRun=0;HaplotypeScore=303.5662;InbreedingCoeff=0.6706;MQ=65.16;MQ0=4;MQRankSum=-7.379;QD=10.18;ReadPosRankSum=0.178;VQSLOD=1.6568;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:35,4:39:3.01:144,3,0	0/0:10,0:10:15.05:0,15,653	./.	./.	0/0:21,0:21:35.86:0,36,2663	0/0:17,0:17:12.04:0,12,971	0/0:31,0:30:33.11:0,33,1745	./.	0/0:22,0:22:33.08:0,33,1830	0/0:23,0:22:30.10:0,30,2143	0/0:20,0:20:33.11:0,33,2160	0/0:38,0:38:63.22:0,63,4979	0/0:37,0:37:63.20:0,63,4897	0/0:30,0:30:51.18:0,51,3494	1/1:11,7:18:12.04:575,12,0	0/0:24,0:24:30.10:0,30,2452	0/0:32,0:32:12.04:0,12,271	1/1:19,6:25:6.02:287,6,0	0/0:21,0:20:6.02:0,6,442	0/0:16,0:16:18.06:0,18,1069	0/0:52,0:51:75.21:0,75,4455	0/0:23,0:23:39.13:0,39,2601	0/0:17,0:17:15.05:0,15,1237	0/0:32,0:32:36.12:0,36,2026	1/1:8,6:14:12.04:575,12,0	0/1:13,0:18:1.84:2,0,50	0/1:16,0:21:8.68:9,0,70	1/1:5,0:8:4.07:11,4,0
chr10	3813838	.	GC	G	6343.18	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=12.392;DP=783;FS=0.301;HRun=6;HaplotypeScore=78.5214;InbreedingCoeff=0.9983;MQ=67.86;MQ0=1;MQRankSum=-7.433;QD=27.22;ReadPosRankSum=4.792;VQSLOD=5.1710;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,33:34:87.22:935,87,0	0/0:18,0:18:42.11:0,42,523	0/0:31,0:31:78.23:0,78,988	0/0:24,0:24:66.20:0,66,842	0/0:25,0:25:69.21:0,69,893	0/0:16,0:16:42.14:0,42,552	0/0:25,0:25:65.09:0,65,850	0/0:33,0:33:87.24:0,87,1091	0/0:25,0:25:69.22:0,69,908	0/0:30,0:30:81.21:0,81,1008	0/0:26,0:26:63.18:0,63,801	0/0:40,0:40:99:0,105,1378	0/0:39,0:39:99:0,108,1388	0/0:34,0:34:90.26:0,90,1153	1/1:2,35:37:96.24:1031,96,0	0/0:34,0:33:96.29:0,96,1234	1/1:2,36:38:93.23:999,93,0	1/1:2,22:24:64.40:680,64,0	0/0:20,0:20:48.15:0,48,614	0/0:22,0:22:57.17:0,57,734	0/0:33,0:33:96.30:0,96,1248	0/0:31,0:31:78.19:0,78,976	0/0:18,0:18:48.15:0,48,614	0/0:26,0:26:72.22:0,72,933	1/1:2,34:36:99:1096,102,0	1/1:3,20:23:23.91:602,24,0	1/1:4,27:31:75.19:806,75,0	1/1:4,6:10:18.04:193,18,0
chr10	3815917	.	C	CCTT	3194.90	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=4.510;DP=761;FS=0.000;HRun=0;HaplotypeScore=124.7627;InbreedingCoeff=0.9999;MQ=72.05;MQ0=0;MQRankSum=-2.135;QD=49.15;ReadPosRankSum=1.931;VQSLOD=5.3124;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,105,1623	0/0:17,0:17:51.08:0,51,734	0/0:25,0:25:66.13:0,66,973	0/0:23,0:23:66.22:0,66,1042	0/0:28,0:28:75.26:0,75,1199	0/0:25,0:25:72.25:0,72,1157	0/0:22,0:22:60.16:0,60,886	0/0:31,0:31:81.26:0,81,1254	0/0:17,0:17:48.16:0,48,767	0/0:35,0:35:99:0,102,1634	0/0:24,0:24:72.21:0,72,1118	0/0:41,0:41:99:0,120,1876	0/0:25,0:25:66.21:0,66,1036	0/0:41,0:41:99:0,120,1800	0/0:29,0:29:78.26:0,78,1225	0/0:28,0:28:84.27:0,84,1325	0/0:25,0:25:75.21:0,75,1154	0/0:32,0:32:81.25:0,81,1276	0/0:24,0:24:57.18:0,57,892	0/0:31,0:31:81.28:0,81,1293	0/0:15,0:15:39.13:0,39,626	0/0:29,0:29:84.28:0,84,1326	0/0:24,0:24:66.22:0,66,1049	0/0:40,0:40:99:0,117,1816	0/0:28,0:28:72.20:0,72,1117	1/1:6,23:30:72.22:1484,72,0	1/1:3,18:23:51.18:1125,51,0	1/1:0,12:12:33.11:729,33,0
chr10	3818242	.	CCACATGTACACATA	C	4448	PASS	AB=0.619;AC=5;AF=0.089;AN=56;BaseQRankSum=10.081;DP=1013;FS=2.949;HRun=0;HaplotypeScore=364.7921;InbreedingCoeff=0.8546;MQ=74.92;MQ0=2;MQRankSum=-9.722;QD=52.95;ReadPosRankSum=1.988;VQSLOD=3.8492;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,105,5346	0/0:18,0:18:51.18:0,51,3074	0/0:46,0:38:71.09:0,71,2645	0/0:65,0:49:99:0,102,3768	0/0:28,0:28:78.21:0,78,4094	0/0:28,0:28:78.23:0,78,4725	0/0:38,0:38:99:0,99,5594	0/0:41,0:41:99:0,102,4422	0/0:46,0:46:99:0,120,6664	0/0:39,0:39:99:0,105,6403	0/0:19,0:19:54.19:0,54,3334	0/0:45,0:45:99:0,117,5731	0/0:41,0:41:99:0,114,6537	0/0:45,0:45:99:0,126,7108	1/1:8,27:35:54.19:2187,54,0	0/0:42,0:42:99:0,108,6190	0/0:31,0:31:81.28:0,81,4454	0/1:10,16:24:3.60:806,0,4	0/0:26,0:26:60.20:0,60,2711	0/0:26,0:26:66.20:0,66,3892	0/0:67,0:67:99:0,187,10037	0/0:33,0:33:87.26:0,87,4448	0/0:36,0:36:99:0,102,5741	0/0:41,0:41:99:0,111,6351	1/1:3,20:23:36.12:1456,36,0	0/0:38,0:38:96.30:0,96,5493	0/0:38,0:38:99:0,105,5880	0/0:9,0:9:27.09:0,27,1604
chr10	3818340	.	T	TACACAC	4012.19	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=-2.343;DP=894;FS=2.915;HRun=0;HaplotypeScore=195.6967;InbreedingCoeff=0.7756;MQ=60.31;MQ0=3;MQRankSum=-5.649;QD=29.72;ReadPosRankSum=-1.153;VQSLOD=3.3226;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:54:99:0,111,2145	0/0:12,0:13:30.02:0,30,492	0/0:32,0:18:4.27:0,4,168	0/1:39,0:30:21.34:21,0,298	0/0:18,0:19:36.02:0,36,615	0/0:26,0:26:39.11:0,39,1157	0/0:32,0:32:72.21:0,72,1593	0/0:33,0:33:19.99:0,20,623	0/0:42,0:41:96.30:0,96,1953	0/0:31,0:31:62.87:0,63,1166	0/0:13,0:14:30.07:0,30,543	0/0:47,0:47:90.55:0,91,2104	0/0:44,0:45:87.23:0,87,1659	0/0:42,0:42:87.26:0,87,1722	1/1:25,23:50:90.27:2510,90,0	0/0:36,0:37:93.10:0,93,1780	0/0:33,0:34:84.22:0,84,1612	1/1:15,3:22:38.40:780,38,0	0/0:17,0:19:42.94:0,43,663	0/0:26,0:27:54.11:0,54,972	0/0:64,0:64:86.09:0,86,1791	0/0:25,0:25:6.94:0,7,681	0/0:12,0:12:33.10:0,33,658	0/0:46,0:46:99:0,117,2294	1/1:15,8:24:27.08:701,27,0	0/0:26,0:26:45.79:0,46,1182	0/0:18,0:18:42.13:0,42,849	0/0:19,0:19:50.65:0,51,709
chr10	3818832	.	AACTGCAAGTAC	A	2035.98	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.815;DP=794;FS=0.000;HRun=0;HaplotypeScore=240.9644;InbreedingCoeff=1.0000;MQ=87.49;MQ0=0;MQRankSum=-7.369;QD=55.03;ReadPosRankSum=-0.515;VQSLOD=2.7188;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,36:37:66.18:2131,66,0	0/0:15,0:15:45.15:0,45,2572	0/0:36,0:36:98.31:0,98,3915	0/0:20,0:20:60.14:0,60,2900	0/0:28,0:28:84.27:0,84,4382	0/0:22,0:22:63.22:0,63,3379	0/0:35,0:35:99:0,99,5204	0/0:50,0:50:99:0,150,7663	0/0:23,0:23:69.24:0,69,3869	0/0:21,0:21:63.21:0,63,3211	0/0:16,0:16:48.16:0,48,2680	0/0:34,0:34:99:0,102,5349	0/0:42,0:42:99:0,123,6552	0/0:22,0:22:66.20:0,66,3505	0/0:32,0:32:93.30:0,93,5089	0/0:34,0:34:99:0,102,5571	0/0:30,0:30:90.31:0,90,5108	0/0:31,0:31:90.27:0,90,4890	0/0:27,0:27:81.24:0,81,3039	0/0:20,0:20:60.21:0,60,3266	0/0:26,0:26:75.24:0,75,3988	0/0:27,0:27:78.24:0,78,4132	0/0:23,0:23:69.22:0,69,3795	0/0:31,0:31:93.26:0,93,4607	0/0:30,0:30:90.31:0,90,4667	0/0:32,0:32:93.31:0,93,4996	0/0:33,0:33:99:0,99,5279	0/0:17,0:17:51.17:0,51,2810
chr10	3819126	.	GT	G	3898.74	PASS	AB=0.920;AC=17;AF=0.304;AN=56;BaseQRankSum=11.328;DP=718;FS=1.009;HRun=10;HaplotypeScore=81.6987;InbreedingCoeff=0.9120;MQ=75.69;MQ0=0;MQRankSum=0.322;QD=15.05;ReadPosRankSum=2.610;VQSLOD=4.1427;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,0:57:91.62:268,92,0	0/0:11,0:11:33.09:0,33,364	0/0:25,0:24:20.50:0,21,384	0/1:21,1:20:5.37:5,0,161	0/0:22,0:26:65.88:0,66,669	0/0:14,0:14:33.09:0,33,365	0/0:29,0:29:78.18:0,78,844	0/0:27,0:28:56.97:0,57,596	0/0:27,0:28:74.97:0,75,772	0/0:27,2:29:26.07:0,26,728	0/0:12,0:12:30.07:0,30,324	0/0:32,0:31:93.22:0,93,1004	0/0:20,0:20:54.12:0,54,577	0/0:29,0:30:87.01:0,87,907	1/1:5,34:39:76.05:833,76,0	0/0:23,0:24:59.95:0,60,629	1/1:5,28:33:77.98:677,78,0	1/1:2,23:25:68.97:599,69,0	0/0:23,1:25:24.93:0,25,472	0/0:17,0:17:42.11:0,42,457	0/0:30,2:32:29.17:0,29,765	0/0:18,0:18:51.13:0,51,556	0/0:19,0:19:46:0,46,492	0/0:38,0:40:99:0,114,1223	1/1:1,19:20:41.99:365,42,0	1/1:3,25:28:8.59:527,9,0	1/1:4,23:27:62.97:547,63,0	1/1:3,4:7:9:78,9,0
chr10	3819886	.	CAT	C	1093.37	PASS	AB=0.974;AC=17;AF=0.304;AN=56;BaseQRankSum=7.149;DP=634;FS=63.544;HRun=0;HaplotypeScore=89.0451;InbreedingCoeff=0.2088;MQ=63.61;MQ0=15;MQRankSum=-0.592;QD=4.05;ReadPosRankSum=-3.142;VQSLOD=-0.6964;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:22:50.84:403,51,0	0/1:8,0:8:29.26:29,0,53	0/0:47,0:28:74.21:0,74,789	0/0:32,0:21:52.96:0,53,503	0/1:14,0:14:23.16:23,0,143	0/0:17,0:17:14:0,14,273	0/0:30,0:30:28.73:0,29,451	0/0:31,0:29:82.67:0,83,655	0/1:23,0:23:99:171,0,195	0/1:20,6:27:25.66:26,0,397	0/0:16,0:16:13.92:0,14,253	0/0:26,0:26:4.04:0,4,441	0/1:19,0:19:12.12:12,0,278	0/1:16,0:16:0.08:0,0,138	1/1:11,0:11:29.88:235,30,0	0/1:33,1:34:25.37:25,0,426	0/0:27,0:26:35.46:0,35,358	1/1:13,0:13:24.99:192,25,0	0/0:20,0:17:11.14:0,11,323	0/0:18,0:18:27.38:0,27,255	0/1:49,0:46:49.22:49,0,611	0/0:20,0:20:25.38:0,25,263	0/1:24,0:24:8.96:9,0,361	0/0:43,1:42:34.97:0,35,412	1/1:10,0:9:11.80:93,12,0	0/0:19,0:18:51.17:0,51,398	0/0:10,0:10:0.11:0,0,150	0/0:7,0:6:7.53:0,8,50
chr10	3819888	.	TAC	T	638.54	PASS	AB=0.889;AC=29;AF=0.630;AN=46;BaseQRankSum=2.877;DP=642;FS=0.000;HRun=0;HaplotypeScore=94.7914;InbreedingCoeff=0.1635;MQ=61.19;MQ0=16;MQRankSum=3.080;QD=1.64;ReadPosRankSum=2.232;VQSLOD=1.1957;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/1:8,0:8:26.39:31,0,26	./.	./.	1/1:12,0:13:5.84:42,6,0	./.	1/1:30,0:30:14.36:121,14,0	0/0:34,0:32:3.02:0,3,7	1/1:20,2:22:14.85:92,15,0	0/0:30,0:30:25.58:0,26,177	0/0:16,0:16:5.45:0,5,60	0/0:27,0:27:16.80:0,17,159	0/0:19,0:19:1.72:0,2,44	0/1:13,3:16:17.49:25,0,17	./.	0/1:19,13:33:70.45:89,0,70	0/1:25,0:27:13.26:13,0,56	1/1:12,0:12:1.55:4,2,0	1/1:21,1:19:3.89:32,4,0	0/1:15,6:21:7.59:26,0,8	0/1:52,0:49:38.42:38,0,52	1/1:14,5:19:6.01:64,6,0	1/1:24,0:24:8.23:39,8,0	1/1:29,14:41:11.85:110,12,0	0/1:10,0:9:0.09:0,0,0	1/1:18,0:18:2.84:14,3,0	1/1:9,0:10:5.68:28,6,0	1/1:4,0:6:2.84:14,3,0
chr10	3822247	.	GTC	G	2199.53	PASS	AB=0.600;AC=15;AF=0.268;AN=56;BaseQRankSum=11.065;DP=713;FS=3.334;HRun=0;HaplotypeScore=101.1879;InbreedingCoeff=0.8228;MQ=58.68;MQ0=21;MQRankSum=-1.377;QD=15.27;ReadPosRankSum=0.522;VQSLOD=3.2845;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:19,16:35:34.70:640,35,0	0/0:9,0:9:21.07:0,21,322	0/0:39,0:11:20.60:0,21,249	0/0:90,0:18:20.69:0,21,285	0/0:23,0:20:8.17:0,8,525	0/0:23,0:22:60.15:0,60,915	0/0:24,0:24:25.64:0,26,753	0/0:26,0:24:42.12:0,42,607	0/0:27,0:27:59.75:0,60,946	0/0:25,0:25:54.18:0,54,879	0/0:9,0:8:18.06:0,18,294	0/0:30,0:30:78.27:0,78,1262	0/0:23,1:24:26.27:0,26,894	0/0:20,0:20:8.60:0,9,573	1/1:5,10:16:18.06:221,18,0	0/0:30,2:32:7.40:0,7,1091	1/1:11,8:19:16.89:357,17,0	0/1:7,14:21:8.11:200,0,8	0/0:18,0:17:2.17:0,2,503	0/0:15,0:15:27.07:0,27,401	0/0:41,0:41:87.18:0,87,1292	0/0:19,0:19:45.15:0,45,733	0/0:26,0:25:54.17:0,54,849	0/0:49,0:49:99:0,123,2000	1/1:1,2:3:6.02:74,6,0	1/1:14,7:21:25.60:373,26,0	1/1:16,8:24:29.82:417,30,0	1/1:2,3:5:11.85:109,12,0
chr10	3822280	.	ACT	A	1836.98	PASS	AB=0.971;AC=15;AF=0.268;AN=56;BaseQRankSum=12.451;DP=681;FS=9.355;HRun=0;HaplotypeScore=122.8597;InbreedingCoeff=0.6839;MQ=72.70;MQ0=9;MQRankSum=-5.647;QD=8.06;ReadPosRankSum=-1.691;VQSLOD=2.4978;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:19,12:31:22.59:197,23,0	0/0:6,0:6:18.06:0,18,300	0/0:63,0:28:41.22:0,41,625	0/1:89,1:45:10.55:11,0,798	0/0:19,0:19:47.87:0,48,791	0/0:24,0:23:66.13:0,66,1072	0/0:24,0:24:69.16:0,69,1119	0/1:20,0:20:11.27:11,0,240	0/0:28,0:28:84.21:0,84,1388	0/0:18,0:18:54.14:0,54,877	0/0:10,0:10:30.09:0,30,534	0/0:28,0:28:81.24:0,81,1395	0/0:22,0:22:58.59:0,59,931	0/0:31,0:31:93.22:0,93,1477	0/1:11,1:12:18.07:61,0,18	0/0:27,0:27:78.23:0,78,1386	1/1:22,0:22:49.52:566,50,0	1/1:5,1:6:7.36:69,7,0	0/0:19,0:19:57.07:0,57,778	0/0:8,0:8:23.65:0,24,381	0/0:33,0:33:87.15:0,87,1449	0/0:22,0:22:63.15:0,63,1041	0/0:18,0:18:48.14:0,48,815	0/0:48,0:48:99:0,108,2205	0/0:4,0:4:4.53:0,5,26	1/1:21,3:24:60.28:620,60,0	1/1:19,1:20:42.15:412,42,0	1/1:3,0:3:6.91:78,7,0
chr10	3822302	.	AC	A	1336.77	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=11.226;DP=572;FS=18.169;HRun=9;HaplotypeScore=97.0465;InbreedingCoeff=0.7666;MQ=77.25;MQ0=2;MQRankSum=-5.489;QD=12.61;ReadPosRankSum=-0.874;VQSLOD=1.5390;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,20:23:35.03:320,35,0	0/0:5,0:5:12.03:0,12,137	0/0:45,0:29:38.55:0,39,397	0/0:43,2:36:1.50:0,2,405	0/0:18,0:18:21.91:0,22,365	0/0:19,2:21:23.67:0,24,517	0/0:22,0:22:51.14:0,51,576	0/0:17,0:17:27.05:0,27,288	0/0:28,0:28:81.20:0,81,903	0/0:13,0:13:27.08:0,27,310	0/1:11,0:11:6.16:6,0,174	0/0:28,0:28:63.15:0,63,697	0/0:23,0:23:54.10:0,54,592	0/0:30,1:31:59.78:0,60,932	0/0:6,0:6:3.40:0,3,18	0/0:22,0:22:59.39:0,59,665	1/1:23,0:23:37.86:298,38,0	1/1:4,0:5:2.69:12,3,0	0/0:17,1:18:8.30:0,8,401	0/0:7,0:7:15.03:0,15,163	0/0:33,0:33:81.15:0,81,876	0/0:17,1:18:20.66:0,21,482	0/0:11,0:11:27.08:0,27,307	0/0:48,0:48:99:0,122,1363	0/0:4,0:4:0.70:0,1,2	1/1:2,15:17:39.01:355,39,0	1/1:1,21:22:42.02:384,42,0	1/1:0,5:5:15.01:137,15,0
chr10	3822311	.	CA	C	967.54	PASS	AB=1.000;AC=14;AF=0.250;AN=56;BaseQRankSum=11.608;DP=603;FS=0.000;HRun=1;HaplotypeScore=97.8034;InbreedingCoeff=0.7219;MQ=83.23;MQ0=2;MQRankSum=-6.636;QD=8.27;ReadPosRankSum=0.705;VQSLOD=0.8392;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:26:59.90:63,0,60	0/0:5,0:5:15.02:0,15,173	0/0:38,1:28:54.10:0,54,560	0/0:41,1:37:15.28:0,15,567	0/0:24,0:24:55.66:0,56,582	0/0:24,0:24:58.52:0,59,742	0/0:21,0:21:60.11:0,60,725	0/0:16,0:16:36.02:0,36,404	0/0:28,0:28:75.18:0,75,989	0/0:18,0:18:51.09:0,51,565	0/0:15,0:15:37.60:0,38,398	0/0:27,0:27:69.13:0,69,844	0/0:22,0:22:48.11:0,48,651	0/0:31,0:31:88.02:0,88,1194	1/1:4,0:4:5.99:50,6,0	0/0:28,0:28:56.49:0,56,945	1/1:4,20:24:57.16:737,57,0	1/1:6,0:6:9.80:81,10,0	0/0:18,0:18:48.48:0,48,565	0/0:9,0:9:20.97:0,21,220	0/0:35,0:35:90.07:0,90,1065	0/0:26,0:26:63.45:0,63,760	0/0:11,0:11:33.07:0,33,398	0/0:47,0:47:99:0,112,1676	1/1:5,0:5:11.99:105,12,0	0/1:25,0:25:22.88:23,0,195	1/1:22,0:22:4.41:61,4,0	1/1:5,0:5:8:24,8,0
chr10	3823739	.	G	GA	1436.64	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-8.497;DP=639;FS=0.543;HRun=10;HaplotypeScore=70.4942;InbreedingCoeff=0.9830;MQ=68.74;MQ0=0;MQRankSum=-0.543;QD=19.95;ReadPosRankSum=0.764;VQSLOD=4.4639;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,1:45:73.30:0,73,801	0/0:7,0:7:20.98:0,21,172	0/0:17,0:16:35.80:0,36,280	0/0:8,0:9:16.74:0,17,114	0/0:21,1:22:27.85:0,28,435	0/0:13,0:13:35.58:0,36,295	0/0:33,0:33:74.79:0,75,614	0/0:33,0:33:74.82:0,75,610	0/0:18,0:18:41.90:0,42,342	0/0:21,0:21:53.93:0,54,443	0/0:19,0:19:53.93:0,54,441	0/0:30,0:30:65.85:0,66,540	0/0:22,0:22:53.89:0,54,442	0/0:29,0:29:56.86:0,57,467	1/1:4,23:28:53.97:558,54,0	0/0:25,0:25:59.86:0,60,489	0/0:35,0:35:89.83:0,90,737	1/1:4,22:26:60.15:640,60,0	0/0:19,0:19:40.08:0,40,313	0/0:17,0:17:41.93:0,42,344	0/0:31,0:31:52.70:0,53,417	0/0:14,0:14:32.93:0,33,270	0/0:17,0:17:35.91:0,36,293	0/0:34,0:34:86.86:0,87,713	1/1:2,16:18:36.09:381,36,0	0/0:24,0:25:55.93:0,56,447	0/0:23,0:25:52.97:0,53,426	0/0:6,0:6:11.96:0,12,99
chr10	3826835	.	G	GT	1341.06	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-0.240;DP=647;FS=3.597;HRun=8;HaplotypeScore=69.0775;InbreedingCoeff=0.9870;MQ=72.70;MQ0=1;MQRankSum=-4.240;QD=26.30;ReadPosRankSum=0.915;VQSLOD=4.5298;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,25:28:78.17:874,78,0	0/0:6,0:6:15.01:0,15,137	0/0:19,0:18:29.42:0,29,231	0/0:17,0:15:30.99:0,31,242	0/0:28,0:28:71.98:0,72,648	0/0:18,0:18:45.02:0,45,412	0/0:18,0:18:48.02:0,48,439	0/0:34,0:34:74.87:0,75,673	0/0:16,0:16:42.02:0,42,384	0/0:22,0:22:59.98:0,60,541	0/0:26,0:27:68.04:0,68,602	0/0:32,0:32:81.03:0,81,740	0/0:28,0:28:75.03:0,75,686	0/0:24,0:24:66:0,66,599	0/0:26,0:26:69.03:0,69,631	0/0:19,0:19:51.02:0,51,466	1/1:4,19:23:51.15:589,51,0	0/0:18,0:18:51.01:0,51,462	0/0:36,0:36:81.01:0,81,735	0/0:32,0:32:90.05:0,90,824	0/0:6,0:6:18.01:0,18,165	0/0:26,1:27:40.42:0,40,624	0/0:25,0:25:75.04:0,75,686	0/0:15,0:15:39.01:0,39,357	0/0:30,0:30:84.05:0,84,768	0/0:25,0:25:60.02:0,60,549	0/0:35,0:35:99:0,102,933	0/0:13,0:13:36.02:0,36,329
chr10	3826852	.	C	CT	503.10	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.983;DP=660;FS=2.939;HRun=8;HaplotypeScore=73.7177;InbreedingCoeff=0.9886;MQ=73.95;MQ0=1;MQRankSum=-4.104;QD=17.35;ReadPosRankSum=-2.136;VQSLOD=3.3601;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:8,21:29:54.11:598,54,0	0/0:7,0:7:21.01:0,21,192	0/0:21,0:20:23.73:0,24,302	0/0:18,0:16:30.41:0,30,258	0/0:27,0:27:75.04:0,75,686	0/0:18,0:18:48.02:0,48,439	0/0:21,0:21:33.47:0,33,465	0/0:35,0:35:71.98:0,72,656	0/0:20,0:20:60.01:0,60,542	0/0:21,0:22:53.05:0,53,473	0/0:30,0:30:78.03:0,78,714	0/0:30,0:30:87.03:0,87,791	0/0:26,2:28:34.40:0,34,569	0/0:26,0:26:63.02:0,63,577	0/0:23,0:23:63.02:0,63,576	0/0:20,0:20:51.02:0,51,467	0/0:22,0:22:59.99:0,60,538	0/0:20,0:20:51.02:0,51,466	0/0:26,0:26:54:0,54,489	0/0:34,0:34:96.05:0,96,878	0/0:8,0:8:21:0,21,192	0/0:28,0:28:75.02:0,75,681	0/0:28,0:28:78.02:0,78,709	0/0:22,0:22:60.03:0,60,549	0/0:30,0:30:84.02:0,84,762	0/0:20,0:20:57.03:0,57,522	0/0:35,0:35:99:0,105,951	0/0:12,0:12:33.01:0,33,302
chr10	3833632	.	C	CA	8921.89	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=-15.776;DP=624;FS=9.067;HRun=0;HaplotypeScore=58.4336;InbreedingCoeff=0.9252;MQ=73.97;MQ0=0;MQRankSum=-2.455;QD=37.02;ReadPosRankSum=4.583;VQSLOD=4.4168;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,41:45:90.31:1433,90,0	0/0:9,0:9:26.91:0,27,330	0/1:14,0:13:8.57:9,0,337	0/0:21,0:21:54.15:0,54,679	0/0:21,0:21:60.20:0,60,815	0/0:24,0:24:66.22:0,66,910	0/0:27,0:27:81.26:0,81,1107	0/0:25,0:25:75.11:0,75,948	0/0:19,0:19:54.14:0,54,729	0/0:12,0:12:33.08:0,33,438	0/0:16,0:16:45.11:0,45,589	0/0:26,0:26:78.19:0,78,1061	0/0:19,0:19:57.14:0,57,765	0/0:21,0:21:60.16:0,60,796	1/1:0,31:31:87.30:1388,87,0	0/0:20,0:20:57.19:0,57,789	1/1:1,32:33:78.27:1245,78,0	1/1:0,23:23:54.16:834,54,0	0/0:12,0:12:33.10:0,33,441	0/0:29,0:29:84.10:0,84,1068	0/0:31,0:31:83.89:0,84,1066	0/0:14,0:14:39.03:0,39,498	0/0:11,0:11:30.06:0,30,394	0/0:26,0:26:78.26:0,78,1081	1/1:0,24:24:66.23:1051,66,0	1/1:0,19:19:57.16:857,57,0	1/1:1,24:25:63.21:1005,63,0	1/1:0,27:27:69.24:1100,69,0
chr10	3835491	.	CT	C	245.21	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.718;DP=552;FS=9.266;HRun=13;HaplotypeScore=64.0719;InbreedingCoeff=0.7824;MQ=72.20;MQ0=2;MQRankSum=0.246;QD=7.43;ReadPosRankSum=-2.002;VQSLOD=1.3751;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,2:36:86.82:0,87,809	0/0:7,0:8:23.87:0,24,214	0/0:24,0:16:16.17:0,16,158	0/0:16,1:11:9.69:0,10,85	0/0:30,0:30:84.03:0,84,787	0/0:34,0:34:59.49:0,59,714	0/0:17,0:17:45.05:0,45,427	1/1:11,21:33:30.57:340,31,0	0/0:14,0:14:24.02:0,24,227	0/0:13,0:13:33.04:0,33,315	0/0:16,1:17:17.15:0,17,327	0/0:13,1:14:14.12:0,14,283	0/0:15,0:15:30.04:0,30,288	0/0:16,0:16:42.04:0,42,397	0/0:23,1:24:4.52:0,5,355	0/0:26,1:27:49.01:0,49,622	0/0:22,1:23:34.84:0,35,480	0/0:20,0:21:56.90:0,57,531	0/0:19,0:19:41.59:0,42,398	0/0:19,2:23:25.83:0,26,381	0/0:12,0:12:26.98:0,27,247	0/0:12,0:13:29.88:0,30,277	0/0:12,0:12:20.16:0,20,202	0/0:11,0:11:30.01:0,30,275	0/0:23,0:23:60.03:0,60,558	0/0:32,0:32:74.80:0,75,681	0/0:17,0:17:36.02:0,36,337	0/0:6,0:6:12.02:0,12,117
chr10	3836251	.	G	GCT	95.75	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=6.524;DP=597;FS=2.794;HRun=0;HaplotypeScore=102.9508;InbreedingCoeff=0.6625;MQ=62.34;MQ0=6;MQRankSum=-3.372;QD=2.04;ReadPosRankSum=-0.606;VQSLOD=1.7001;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:32:48.63:0,49,783	0/0:9,0:9:24.07:0,24,325	0/0:12,0:8:18.01:0,18,228	0/0:14,0:6:17.65:0,18,174	0/0:21,0:21:60.20:0,60,849	0/0:23,0:23:63.62:0,64,874	0/0:20,0:20:50.61:0,51,738	0/0:16,0:16:47.97:0,48,621	0/0:25,0:25:63.59:0,64,775	0/0:29,0:29:78.10:0,78,1064	0/0:18,0:18:42.11:0,42,590	0/0:32,0:32:71.38:0,71,999	0/0:25,0:25:70.70:0,71,908	0/0:31,0:30:72.07:0,72,969	0/0:20,0:20:13.94:0,14,71	0/0:27,0:26:72.16:0,72,928	1/1:16,0:16:2.12:36,2,0	0/0:20,0:19:22.71:0,23,132	0/0:26,0:25:69.14:0,69,932	0/0:18,0:18:51.14:0,51,645	0/0:36,0:36:84.26:0,84,1173	0/0:24,0:24:57.11:0,57,750	0/0:11,0:11:26.50:0,26,367	0/0:35,0:34:85.32:0,85,1141	0/0:23,0:23:22.93:0,23,128	1/1:17,0:17:0.70:132,1,0	1/1:8,5:13:2.78:32,3,0	0/0:2,0:2:2.94:0,3,18
chr10	3836253	.	GCA	G	980.70	PASS	AB=0.914;AC=23;AF=0.442;AN=52;BaseQRankSum=5.045;DP=620;FS=6.922;HRun=0;HaplotypeScore=94.9401;InbreedingCoeff=-0.3252;MQ=58.49;MQ0=6;MQRankSum=-2.107;QD=2.12;ReadPosRankSum=-0.614;VQSLOD=1.2837;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:20.40:0,20,193	0/1:8,0:9:5.12:5,0,52	./.	./.	0/1:20,0:21:2.08:2,0,118	0/1:24,0:24:28.75:29,0,139	0/1:20,0:20:33.34:33,0,97	0/0:20,0:19:11.79:0,12,75	0/1:22,1:24:83.38:83,0,209	0/1:24,3:27:40.60:41,0,67	0/0:18,0:18:21.02:0,21,248	0/1:26,6:33:69.86:70,0,221	0/1:21,3:24:81.59:82,0,234	0/1:27,0:27:24.80:25,0,79	1/1:14,5:19:15.03:159,15,0	0/1:27,3:29:2.26:2,0,302	0/0:6,0:24:6:0,6,52	0/1:15,3:18:17.94:114,0,18	0/1:27,0:26:20.31:20,0,80	0/1:17,4:22:71.77:87,0,72	0/1:31,5:37:51.73:52,0,214	0/1:23,0:24:14.43:14,0,165	0/1:10,0:11:27.59:28,0,35	0/1:31,0:35:34.68:35,0,314	1/1:16,7:24:24.32:228,24,0	0/0:19,0:19:23.88:0,24,201	0/0:14,0:13:8.99:0,9,75	1/1:3,0:3:1.24:27,1,0
chr10	3841320	.	AAG	A	748.24	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.184;DP=716;FS=0.000;HRun=0;HaplotypeScore=84.2214;InbreedingCoeff=0.9979;MQ=81.88;MQ0=0;MQRankSum=1.659;QD=29.93;ReadPosRankSum=-4.619;VQSLOD=3.7599;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:96.31:0,96,1651	0/0:8,0:8:24.07:0,24,384	0/0:24,0:24:57.51:0,58,811	0/0:30,0:29:68.76:0,69,1020	0/0:24,0:24:69.20:0,69,1133	0/0:26,0:26:75.18:0,75,1150	0/0:26,0:26:78.18:0,78,1198	1/1:2,23:25:69.13:843,69,0	0/0:23,0:23:69.04:0,69,1110	0/0:38,0:38:99:0,108,1722	0/0:23,0:23:69.24:0,69,1198	0/0:23,0:23:66.21:0,66,1126	0/0:16,0:16:45.14:0,45,759	0/0:32,0:32:93.29:0,93,1570	0/0:35,0:35:99:0,99,1667	0/0:37,0:37:99:0,108,1738	0/0:24,0:24:66.20:0,66,1095	0/0:26,0:26:69.19:0,69,1174	0/0:24,0:24:57.17:0,57,935	0/0:27,0:27:75.69:0,76,1222	0/0:19,0:19:54.16:0,54,890	0/0:30,0:30:87.27:0,87,1464	0/0:17,0:17:45.10:0,45,702	0/0:20,0:20:51.17:0,51,886	0/0:22,0:22:63.09:0,63,979	0/0:31,0:31:93.29:0,93,1542	0/0:34,0:34:99:0,99,1657	0/0:15,0:15:42.11:0,42,686
chr10	3843603	.	C	CA	1506.14	PASS	AB=0.781;AC=8;AF=0.143;AN=56;BaseQRankSum=7.061;DP=872;FS=83.516;HRun=1;HaplotypeScore=321.8563;InbreedingCoeff=-0.1908;MQ=55.19;MQ0=0;MQRankSum=-9.394;QD=4.95;ReadPosRankSum=4.580;VQSLOD=0.1340;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:13,2:15:9.02:0,9,116	0/0:22,4:26:18.36:0,18,225	0/0:13,0:11:36.35:0,36,354	0/0:20,0:15:49.71:0,50,516	0/0:29,18:47:17.87:0,18,239	0/0:22,3:25:24.03:0,24,311	0/1:15,7:22:25.03:25,0,263	0/1:28,11:39:99:379,0,796	0/0:25,8:33:8.96:0,9,116	0/1:46,20:66:99:584,0,1210	0/0:26,7:33:1.66:0,2,43	0/0:34,6:40:23.93:0,24,287	0/1:28,11:39:27.61:28,0,105	0/0:29,13:42:17.53:0,18,232	0/0:29,10:39:15:0,15,194	0/0:35,11:46:49.89:0,50,627	0/0:11,0:11:15.62:0,16,167	0/0:9,0:9:21.03:0,21,272	0/1:13,2:15:41.30:41,0,380	0/0:35,16:51:39.22:0,39,350	0/0:16,0:16:21.07:0,21,273	0/1:28,17:45:18.04:18,0,335	0/0:17,15:32:20.48:0,20,175	0/0:15,2:17:12.45:0,12,137	0/0:31,10:41:39.43:0,39,509	0/1:33,18:51:99:434,0,790	0/1:21,6:26:99:131,0,269	0/0:8,4:12:6.87:0,7,184
chr10	3845660	.	GT	G	1037.72	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.153;DP=810;FS=0.721;HRun=1;HaplotypeScore=75.8395;InbreedingCoeff=0.9805;MQ=82.46;MQ0=0;MQRankSum=-1.744;QD=38.43;ReadPosRankSum=-3.036;VQSLOD=2.9790;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:58:99:0,175,2758	0/0:7,0:7:21.07:0,21,335	0/0:23,0:23:60.16:0,60,927	0/0:20,0:20:57.15:0,57,836	0/0:28,0:28:81.26:0,81,1271	0/0:28,0:28:78.25:0,78,1221	0/0:39,0:39:99:0,117,1845	1/1:0,27:27:81.27:1133,81,0	0/0:22,0:22:66.21:0,66,1031	0/0:34,0:34:96.33:0,96,1535	0/0:19,0:19:57.19:0,57,910	0/0:30,0:30:90.31:0,90,1436	0/0:36,0:36:99:0,108,1694	0/0:44,0:44:99:0,129,2060	0/0:46,0:46:99:0,138,2181	0/0:31,0:31:93.32:0,93,1487	0/0:38,0:38:99:0,114,1822	0/0:29,0:29:87.30:0,87,1391	0/0:24,0:24:69.24:0,69,1103	0/0:13,0:13:36.12:0,36,575	0/0:53,0:53:99:0,160,2542	0/0:22,0:22:66.23:0,66,1055	0/0:19,0:19:57.17:0,57,886	0/0:32,0:32:93.26:0,93,1431	0/0:24,0:24:72.25:0,72,1147	0/0:30,0:30:90.31:0,90,1437	0/0:28,0:27:84.25:0,84,1289	0/0:6,0:6:15.05:0,15,240
chr10	3847363	.	TACC	T	654.47	PASS	AB=0.981;AC=17;AF=0.304;AN=56;BaseQRankSum=-1.697;DP=484;FS=0.483;HRun=0;HaplotypeScore=190.7196;InbreedingCoeff=-0.4510;MQ=36.86;MQ0=1;MQRankSum=-3.706;QD=1.86;ReadPosRankSum=-8.386;VQSLOD=0.2664;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:29:41.47:41,0,147	0/0:6,0:5:6:0,6,61	0/0:6,0:3:0.94:0,1,2	0/0:8,1:2:0.83:0,1,20	0/0:15,0:15:8.94:0,9,67	0/1:20,0:20:67.12:67,0,73	0/1:25,0:25:47.14:47,0,138	0/1:8,7:12:12.45:258,0,12	0/0:22,0:21:5.27:0,5,202	0/1:10,0:10:7.84:8,0,169	0/0:4,0:4:4.87:0,5,36	0/1:25,0:25:70.56:71,0,97	0/0:27,0:25:22.14:0,22,388	0/1:20,0:20:9.46:9,0,210	0/1:32,0:32:59.58:60,0,303	0/1:26,0:26:32.98:33,0,280	0/0:11,0:10:6.41:0,6,165	0/1:10,0:10:40.85:41,0,106	0/0:13,0:11:22.46:0,22,201	0/1:15,0:14:11.52:12,0,33	0/1:23,0:21:17.09:17,0,148	0/0:14,0:13:11.87:0,12,66	0/1:7,0:6:10.67:11,0,25	0/1:27,0:27:6.21:6,0,168	0/1:28,0:26:37.34:37,0,141	0/1:20,0:19:74.53:75,0,148	0/1:19,0:19:9.04:9,0,228	0/0:6,0:6:16.20:0,16,135
chr10	3853763	.	CT	C	1308.58	PASS	AB=0.847;AC=10;AF=0.179;AN=56;BaseQRankSum=5.040;DP=588;FS=3.363;HRun=11;HaplotypeScore=67.9992;InbreedingCoeff=0.5175;MQ=70.30;MQ0=0;MQRankSum=-1.397;QD=9.22;ReadPosRankSum=2.491;VQSLOD=2.7694;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:78.55:0,79,809	0/0:11,0:11:9.96:0,10,268	0/0:23,0:20:32.02:0,32,300	0/1:17,1:12:1.87:2,0,118	0/1:19,4:22:16.85:17,0,434	0/0:18,1:19:29.49:0,29,519	0/0:19,0:19:43.35:0,43,451	0/0:15,0:37:54.48:0,54,414	0/0:16,0:16:17.41:0,17,362	0/0:23,0:23:63.14:0,63,655	0/0:16,0:16:18.33:0,18,348	0/0:22,1:23:23.51:0,24,448	0/0:15,0:15:36.05:0,36,366	0/1:11,3:14:16.14:16,0,253	0/0:20,2:22:4.83:0,5,449	0/0:21,0:21:51.13:0,51,544	0/0:3,0:22:42.87:0,43,225	0/0:20,0:20:45.09:0,45,468	0/0:24,0:26:62.10:0,62,653	0/0:17,1:18:26.48:0,26,480	0/1:9,4:13:65.50:65,0,190	0/0:20,0:21:44.95:0,45,462	0/0:21,1:22:23.93:0,24,443	0/0:17,0:18:50.96:0,51,526	0/0:23,0:23:60.09:0,60,615	1/1:3,17:20:50.88:413,51,0	1/1:9,26:37:72.44:602,72,0	1/1:2,14:17:43.99:351,44,0
chr10	3855236	.	T	TACAC	7980.64	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-9.830;DP=524;FS=0.425;HRun=0;HaplotypeScore=84.8426;InbreedingCoeff=0.9918;MQ=66.42;MQ0=1;MQRankSum=-6.033;QD=54.66;ReadPosRankSum=-2.342;VQSLOD=4.8100;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,18:24:51.18:1217,51,0	0/0:5,0:5:15.05:0,15,259	0/0:13,0:12:21.53:0,22,310	0/0:13,0:10:14.53:0,15,213	0/0:17,0:17:42.14:0,42,725	0/0:23,0:24:63.21:0,63,1060	0/0:15,0:15:36.11:0,36,595	1/1:16,23:43:96.32:2215,96,0	0/0:17,0:17:48.16:0,48,827	0/0:22,0:21:51.16:0,51,851	0/0:20,0:20:51.15:0,51,845	0/0:13,0:13:33.10:0,33,539	0/0:18,0:18:51.13:0,51,796	0/0:11,0:11:33.11:0,33,570	1/1:4,22:26:69.02:1621,69,0	0/0:17,0:18:45.14:0,45,727	1/1:6,11:17:30.10:734,30,0	1/1:0,9:9:27.09:681,27,0	0/0:17,0:17:42.12:0,42,668	0/0:28,0:28:78.24:0,78,1295	0/0:16,0:16:39.12:0,39,641	0/0:13,0:14:29.27:0,29,658	0/0:19,0:19:48.12:0,48,793	0/0:10,0:10:30.10:0,30,514	1/1:2,23:25:60.21:1513,60,0	0/0:24,0:24:63.21:0,63,1059	0/0:25,0:26:69.21:0,69,1135	0/0:18,0:18:54.18:0,54,933
chr10	3855316	.	AACTCAGTC	A	5757.56	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=12.289;DP=562;FS=8.468;HRun=0;HaplotypeScore=143.8124;InbreedingCoeff=0.9982;MQ=85.08;MQ0=1;MQRankSum=-12.901;QD=59.97;ReadPosRankSum=0.563;VQSLOD=4.5965;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,12:19:39.10:938,39,0	0/0:8,0:8:24.07:0,24,964	0/0:19,0:18:44.99:0,45,1770	0/0:20,0:20:54.19:0,54,2175	0/0:22,0:22:66.21:0,66,2842	0/0:21,0:21:60.21:0,60,2638	0/0:22,0:22:63.22:0,63,2577	0/0:27,0:27:69.24:0,69,2944	0/0:24,0:24:72.25:0,72,3067	0/0:33,0:32:96.33:0,96,4295	0/0:13,0:13:36.12:0,36,1517	0/0:17,0:17:51.17:0,51,2111	0/0:22,0:22:66.21:0,66,2791	0/0:14,0:14:39.13:0,39,1744	1/1:3,29:32:72.25:2065,72,0	0/0:30,0:30:90.31:0,90,4025	1/1:4,15:19:33.11:947,33,0	1/1:3,9:12:24.08:689,24,0	0/0:15,0:15:45.15:0,45,1927	0/0:19,0:19:51.18:0,51,2265	0/0:46,0:46:99:0,135,5879	0/0:14,0:14:42.14:0,42,1864	0/0:15,0:15:42.14:0,42,1866	0/0:9,0:9:27.09:0,27,1115	1/1:1,13:14:39.13:1119,39,0	0/0:21,0:21:57.20:0,57,2474	0/0:27,0:27:81.27:0,81,3387	0/0:8,0:8:24.08:0,24,991
chr10	3855962	.	AG	A	4671	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=12.156;DP=860;FS=13.340;HRun=2;HaplotypeScore=80.0220;InbreedingCoeff=0.9976;MQ=76.22;MQ0=0;MQRankSum=-0.534;QD=36.49;ReadPosRankSum=3.311;VQSLOD=4.3663;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,135,2018	0/0:12,0:12:36.12:0,36,539	0/0:20,0:20:17.93:0,18,684	0/0:23,0:23:69.21:0,69,964	0/0:14,0:14:42.14:0,42,629	0/0:18,0:18:54.16:0,54,785	0/0:32,0:32:90.30:0,90,1346	0/0:34,0:34:99:0,99,1481	0/0:37,0:37:99:0,108,1614	0/0:30,0:30:90.30:0,90,1338	0/0:17,0:17:45.15:0,45,673	0/0:56,0:56:99:0,166,2445	0/0:40,0:40:99:0,120,1712	0/0:45,0:45:99:0,129,1892	1/1:0,41:41:99:1558,120,0	0/0:39,0:39:99:0,105,1515	1/1:0,39:39:99:1324,102,0	1/1:0,27:27:75.24:971,75,0	0/0:25,0:25:75.25:0,75,1124	0/0:39,0:39:99:0,114,1680	0/0:62,0:62:99:0,184,2720	0/0:23,0:23:63.21:0,63,944	0/0:18,0:18:54.18:0,54,805	0/0:30,0:30:90.30:0,90,1348	1/1:0,21:21:63.20:817,63,0	0/0:29,0:29:87.29:0,87,1304	0/0:23,0:23:69.23:0,69,1030	0/0:20,0:20:60.20:0,60,888
chr10	3856401	.	CGATGAT	C	2723.49	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=8.146;DP=845;FS=1.162;HRun=0;HaplotypeScore=165.3926;InbreedingCoeff=0.9370;MQ=55.63;MQ0=11;MQRankSum=-10.269;QD=21.44;ReadPosRankSum=3.084;VQSLOD=3.4517;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:44:51.12:0,51,1085	0/0:10,0:10:30.10:0,30,874	0/0:22,0:5:6.49:0,6,95	0/0:31,0:12:7.37:0,7,244	0/0:24,0:23:63.16:0,63,1676	0/0:28,0:28:67.76:0,68,1876	0/0:34,0:34:75.23:0,75,1886	0/0:29,0:29:34.37:0,34,538	0/0:33,0:33:93.32:0,93,2569	0/0:31,0:31:64.05:0,64,1732	0/0:21,0:21:51.17:0,51,1365	0/0:44,0:44:99:0,108,3149	0/0:28,0:29:78.18:0,78,2207	0/0:31,0:31:75.26:0,75,2216	1/1:13,42:55:78.26:1492,78,0	0/0:44,0:44:96.32:0,96,2679	1/1:8,13:21:18.06:379,18,0	1/1:8,13:21:12.04:252,12,0	0/0:25,0:23:18.06:0,18,513	0/0:20,0:21:48.10:0,48,1204	0/0:36,0:37:84.21:0,84,2085	0/0:30,0:30:72.19:0,72,1819	0/0:20,0:20:39.12:0,39,1042	0/0:39,0:39:93.32:0,93,2830	1/1:3,27:30:36.12:756,36,0	0/0:23,0:52:88.83:0,89,1781	0/0:10,0:22:32.90:0,33,763	0/0:3,0:17:18.04:0,18,387
chr10	3856710	.	C	CG	403.91	PASS	AB=0.729;AC=4;AF=0.071;AN=56;BaseQRankSum=4.130;DP=633;FS=7.353;HRun=0;HaplotypeScore=69.9425;InbreedingCoeff=-0.0823;MQ=64.58;MQ0=6;MQRankSum=-3.977;QD=10.63;ReadPosRankSum=-2.603;VQSLOD=2.9418;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:9,4:13:99:142,0,121	0/0:11,0:10:30.09:0,30,402	0/0:27,0:17:49.42:0,49,576	0/0:16,0:11:29.94:0,30,327	0/0:29,0:28:75.19:0,75,962	0/0:13,0:13:39.11:0,39,512	0/0:42,0:41:99:0,120,1530	0/0:2,0:2:2.99:0,3,23	0/0:26,0:26:75.23:0,75,1015	0/0:24,0:24:63.17:0,63,796	0/0:18,0:18:51.16:0,51,697	0/0:32,0:32:93.31:0,93,1295	0/0:24,0:24:72.23:0,72,987	0/0:33,0:33:99:0,99,1345	0/0:38,0:38:99:0,111,1461	0/0:26,0:26:78.23:0,78,1041	0/0:28,0:28:84.26:0,84,1135	0/0:19,0:19:57.19:0,57,791	0/0:20,0:17:48.09:0,48,601	0/0:17,0:16:45.14:0,45,608	0/0:60,0:59:99:0,177,2347	0/0:23,0:23:66.21:0,66,903	0/0:14,0:14:42.12:0,42,554	0/0:26,0:26:78.19:0,78,1033	0/0:27,0:27:77.72:0,78,894	0/1:5,5:10:99:191,0,117	0/1:7,3:10:77.23:107,0,77	0/1:3,2:5:38.27:74,0,38
chr10	3857762	.	A	AC	1631.60	PASS	AB=0.742;AC=12;AF=0.214;AN=56;BaseQRankSum=-5.180;DP=542;FS=4.070;HRun=9;HaplotypeScore=55.5030;InbreedingCoeff=0.7467;MQ=79.86;MQ0=0;MQRankSum=-5.450;QD=11.25;ReadPosRankSum=-1.790;VQSLOD=2.2615;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,4:26:10.88:86,11,0	0/0:15,0:16:7.85:0,8,285	0/0:23,0:22:30.80:0,31,371	0/0:12,0:12:21.87:0,22,183	0/1:13,1:14:6.22:6,0,173	0/0:16,0:16:28.75:0,29,254	0/0:34,0:34:89.98:0,90,781	1/1:16,12:28:4.02:265,4,0	0/0:23,0:23:54.55:0,55,469	0/0:25,0:25:50.95:0,51,438	0/0:8,0:8:19.24:0,19,159	0/0:24,1:25:34.28:0,34,509	0/0:17,0:17:38.98:0,39,337	0/0:32,0:32:86.93:0,87,744	0/1:5,22:27:10.13:356,0,10	0/0:23,0:25:52:0,52,420	1/1:2,14:17:41.78:427,42,0	1/1:3,14:17:33.09:365,33,0	0/0:15,0:15:20.02:0,20,162	0/0:8,0:8:14.99:0,15,130	0/0:39,0:39:99:0,102,874	0/0:7,0:7:18:0,18,156	0/0:11,0:11:23.96:0,24,205	0/0:15,0:15:44.93:0,45,379	1/1:12,4:16:30.03:297,30,0	0/0:15,0:16:45.49:0,45,364	0/0:24,0:24:59.91:0,60,510	0/0:5,0:5:12:0,12,104
chr10	3858340	.	CACAG	C	3593.06	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=2.695;DP=747;FS=5.039;HRun=0;HaplotypeScore=124.1966;InbreedingCoeff=0.9436;MQ=60.95;MQ0=36;MQRankSum=0.602;QD=24.28;ReadPosRankSum=0.274;VQSLOD=3.4308;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:14,6:15:15.94:258,16,0	0/0:12,0:12:33.10:0,33,472	0/0:31,0:19:29.71:0,30,362	0/0:49,0:32:18.40:0,18,465	0/0:13,0:12:5.61:0,6,53	0/0:14,0:14:36.10:0,36,496	0/0:42,0:39:72.23:0,72,1029	1/1:8,7:12:24.08:397,24,0	0/0:31,0:27:69.22:0,69,1176	0/0:32,0:28:72.22:0,72,991	0/0:10,0:10:9.03:0,9,116	0/0:43,0:41:99:0,100,1556	0/0:23,0:19:51.16:0,51,884	0/0:27,0:25:54.11:0,54,816	1/1:39,0:39:34.26:714,34,0	0/0:28,0:25:72.24:0,72,1302	0/0:59,0:53:99:0,102,1479	1/1:24,1:22:11.34:572,11,0	0/0:21,0:14:25.22:0,25,311	0/0:8,0:7:12.04:0,12,171	0/0:67,0:61:99:0,121,1737	0/0:19,0:18:30.09:0,30,402	0/0:14,0:13:18.03:0,18,222	0/0:55,0:53:59.89:0,60,1719	1/1:15,0:14:18.06:308,18,0	1/1:21,2:22:51.14:807,51,0	1/1:7,1:8:24.06:382,24,0	1/1:1,2:3:9.03:154,9,0
chr10	3858344	.	G	GAC	3858.78	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=3.247;DP=756;FS=4.110;HRun=0;HaplotypeScore=102.8952;InbreedingCoeff=0.9027;MQ=56.67;MQ0=49;MQRankSum=-0.045;QD=22.83;ReadPosRankSum=-0.925;VQSLOD=3.9648;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:16,2:13:14.57:259,15,0	0/0:12,0:12:36.07:0,36,471	0/0:25,0:13:29.81:0,30,362	0/0:47,0:30:17.22:0,17,453	0/0:14,0:13:5.61:0,6,53	0/0:14,0:14:36:0,36,495	0/0:44,0:40:72.13:0,72,1029	1/1:15,0:11:24.08:398,24,0	0/0:30,3:29:69.14:0,69,966	0/0:33,0:28:75.22:0,75,1010	0/0:8,0:8:9.03:0,9,115	0/0:48,0:43:99:0,108,1498	0/0:24,1:21:51.23:0,51,733	0/0:29,0:26:60:0,60,771	1/1:4,37:41:30.31:802,30,0	0/0:27,1:24:72.24:0,72,1019	0/0:59,0:50:91.39:0,91,1379	1/1:10,14:21:23.80:701,24,0	0/1:21,0:14:0.85:1,0,303	0/0:8,0:6:12.04:0,12,171	0/0:72,0:64:99:0,127,1755	0/0:18,0:16:30.09:0,30,402	0/0:13,0:11:18.03:0,18,222	0/0:54,2:52:66:0,66,1556	1/1:6,13:15:18.06:328,18,0	1/1:12,7:18:51.14:814,51,0	1/1:4,5:8:24.06:398,24,0	1/1:2,1:3:9.03:157,9,0
chr10	3858346	.	CAG	C	662.89	PASS	AB=0.988;AC=15;AF=0.268;AN=56;BaseQRankSum=11.876;DP=777;FS=1.522;HRun=0;HaplotypeScore=111.0068;InbreedingCoeff=0.6801;MQ=55.32;MQ0=55;MQRankSum=1.827;QD=3.31;ReadPosRankSum=-1.265;VQSLOD=2.4928;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:13:13.81:57,14,0	0/0:12,0:12:36.08:0,36,579	0/0:23,0:12:29.24:0,29,368	0/1:47,0:29:16.45:16,0,484	0/0:14,0:13:5.61:0,6,64	0/0:14,0:14:36.09:0,36,592	0/0:45,0:41:72.13:0,72,1278	1/1:13,0:9:20.56:87,21,0	0/0:35,0:30:69.22:0,69,1251	0/0:32,0:26:75.23:0,75,1246	0/0:9,0:9:9.50:0,10,158	0/0:47,0:42:99:0,111,1949	0/0:25,0:20:53.93:0,54,967	0/0:30,0:25:60.08:0,60,975	0/1:40,0:40:13.75:130,0,14	0/0:28,0:24:72.25:0,72,1331	0/0:63,0:54:99:0,113,1915	0/1:25,1:23:30.57:94,0,31	0/0:21,0:14:35.66:0,36,474	0/0:7,0:5:12.04:0,12,217	0/0:80,0:68:99:0,130,2165	0/0:20,0:18:30.01:0,30,436	0/0:13,0:10:18.03:0,18,267	0/0:58,1:53:99:0,109,2058	1/1:20,0:14:16.79:81,17,0	1/1:20,1:19:42.87:241,43,0	1/1:10,1:10:22.18:111,22,0	1/1:4,0:3:7.99:34,8,0
chr10	3858460	.	CACACAG	C	853.07	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.149;DP=809;FS=2.804;HRun=0;HaplotypeScore=182.2186;InbreedingCoeff=0.9181;MQ=57.15;MQ0=20;MQRankSum=-7.860;QD=20.81;ReadPosRankSum=-2.190;VQSLOD=3.3007;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:33.79:0,34,1203	0/0:7,0:7:21.07:0,21,512	0/0:26,0:14:33.25:0,33,831	0/0:36,0:19:45.05:0,45,1034	0/0:9,0:9:27.09:0,27,582	0/0:26,0:25:59.68:0,60,1516	0/0:37,0:36:93.67:0,94,2222	0/0:30,0:30:72.45:0,72,1732	0/0:33,0:28:75.15:0,75,1748	0/0:29,0:27:80.86:0,81,2107	0/0:9,0:8:21.05:0,21,464	0/0:49,0:48:99:0,141,3408	0/0:26,0:26:75.21:0,75,1681	0/0:28,0:25:63.64:0,64,1494	0/0:39,0:35:80.51:0,81,1824	0/0:30,0:29:81.19:0,81,1802	0/0:49,0:49:99:0,114,2270	0/0:24,0:21:44.99:0,45,871	0/0:11,0:10:30.10:0,30,780	0/0:14,0:14:42.14:0,42,1039	0/0:111,0:104:99:0,275,6549	0/0:16,0:14:39.12:0,39,936	0/0:8,0:8:24.08:0,24,610	0/0:70,0:68:99:0,178,4466	0/0:21,0:20:45.13:0,45,1066	1/1:7,13:17:13.68:595,14,0	1/1:0,16:16:17.67:328,18,0	1/1:0,5:5:3.01:57,3,0
chr10	3858700	.	C	CCT	12405.01	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-15.021;DP=678;FS=7.452;HRun=0;HaplotypeScore=75.4779;InbreedingCoeff=0.9986;MQ=81.65;MQ0=1;MQRankSum=-2.070;QD=48.84;ReadPosRankSum=-0.104;VQSLOD=5.6152;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,44:44:99:2143,114,0	0/0:6,0:6:18.06:0,18,274	0/0:27,0:27:78.18:0,78,1117	0/0:13,0:13:34:0,34,507	0/0:22,0:22:54.14:0,54,789	0/0:40,0:40:99:0,117,1765	0/0:26,0:26:72.23:0,72,1080	1/1:1,27:28:81.27:1495,81,0	0/0:23,0:23:66.22:0,66,1011	0/0:37,0:37:99:0,105,1532	0/0:11,0:11:30.10:0,30,457	0/0:28,0:28:81.28:0,81,1238	0/0:24,0:24:69.23:0,69,1055	0/0:18,0:18:51.17:0,51,779	1/1:2,36:39:99:1993,105,0	0/0:24,0:24:72.24:0,72,1101	1/1:3,32:36:84.28:1594,84,0	1/1:0,16:16:45.15:854,45,0	0/0:22,0:22:49.42:0,49,895	0/0:15,0:15:45.15:0,45,687	0/0:29,0:29:84.27:0,84,1263	0/0:18,0:18:51.13:0,51,754	0/0:23,0:23:69.15:0,69,1015	0/0:18,0:18:51.17:0,51,779	1/1:1,24:26:63.21:1195,63,0	1/1:1,25:26:69.19:1256,69,0	1/1:1,22:25:63.21:1193,63,0	1/1:0,13:13:36.12:682,36,0
chr10	3859271	.	GA	G	317.11	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.671;DP=715;FS=0.832;HRun=1;HaplotypeScore=76.3033;InbreedingCoeff=0.9843;MQ=75.79;MQ0=0;MQRankSum=-3.181;QD=13.21;ReadPosRankSum=-0.876;VQSLOD=2.1835;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,12:24:55.12:412,55,0	0/0:15,0:15:45.14:0,45,694	0/0:13,0:13:38.90:0,39,526	0/0:15,0:15:38.10:0,38,578	0/0:24,0:24:72.23:0,72,1126	0/0:37,0:37:99:0,111,1717	0/0:24,0:24:69.21:0,69,1048	0/0:34,0:34:99:0,102,1627	0/0:17,0:17:51.17:0,51,808	0/0:33,0:33:99:0,99,1582	0/0:23,0:23:66.21:0,66,1029	0/0:33,0:33:99:0,99,1555	0/0:32,0:32:96.33:0,96,1532	0/0:23,0:23:69.24:0,69,1100	0/0:36,0:36:99:0,108,1676	0/0:30,0:29:90.29:0,90,1414	0/0:36,0:36:99:0,108,1624	0/0:24,0:24:66.22:0,66,1044	0/0:22,0:22:66.19:0,66,969	0/0:28,0:28:84.27:0,84,1320	0/0:19,0:19:57.19:0,57,908	0/0:26,0:26:78.27:0,78,1245	0/0:29,0:29:84.25:0,84,1293	0/0:25,0:25:75.26:0,75,1199	0/0:23,0:23:69.24:0,69,1102	0/0:30,0:30:90.30:0,90,1417	0/0:35,0:34:99:0,102,1604	0/0:5,0:5:15.05:0,15,240
chr10	3859274	.	T	TC	451.77	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.964;DP=722;FS=2.803;HRun=1;HaplotypeScore=77.7413;InbreedingCoeff=0.9844;MQ=77.35;MQ0=0;MQRankSum=-2.343;QD=16.73;ReadPosRankSum=-1.627;VQSLOD=3.4120;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,12:27:65.11:547,65,0	0/0:14,0:14:42.11:0,42,567	0/0:14,0:14:41.91:0,42,525	0/0:17,0:17:47.10:0,47,537	0/0:24,0:24:72.24:0,72,1001	0/0:37,0:37:99:0,108,1510	0/0:22,0:22:66.22:0,66,923	0/0:32,0:32:96.30:0,96,1313	0/0:16,0:16:48.16:0,48,671	0/0:33,0:33:99:0,99,1385	0/0:23,0:23:63.21:0,63,881	0/0:37,0:37:99:0,108,1489	0/0:33,0:33:99:0,99,1331	0/0:23,0:23:69.23:0,69,965	0/0:36,0:36:99:0,105,1451	0/0:32,0:31:93.30:0,93,1282	0/0:33,0:33:99:0,99,1384	0/0:25,0:25:63.21:0,63,881	0/0:23,0:23:66.21:0,66,908	0/0:27,0:27:81.27:0,81,1133	0/0:18,0:18:54.18:0,54,755	0/0:28,0:28:81.24:0,81,1099	0/0:27,0:27:78.20:0,78,1049	0/0:26,0:26:78.22:0,78,1067	0/0:25,0:25:72.22:0,72,983	0/0:32,0:32:93.31:0,93,1300	0/0:33,0:32:99:0,99,1381	0/0:5,0:5:15.05:0,15,210
chr10	3860434	.	C	CAA	5214.32	PASS	AB=0.578;AC=17;AF=0.304;AN=56;BaseQRankSum=-0.424;DP=668;FS=17.384;HRun=11;HaplotypeScore=93.2562;InbreedingCoeff=0.9125;MQ=72.75;MQ0=0;MQRankSum=0.526;QD=19.90;ReadPosRankSum=-0.864;VQSLOD=2.1337;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,0:33:57.39:198,57,0	0/0:18,0:19:34.98:0,35,369	0/0:15,0:15:14.43:0,14,104	0/0:11,0:12:11.55:0,12,93	0/0:28,0:34:52.78:0,53,554	0/0:19,0:22:33.43:0,33,403	0/0:26,0:26:66.07:0,66,634	1/1:11,3:43:93.93:887,94,0	0/0:26,0:28:71.53:0,72,664	0/0:25,0:25:50.97:0,51,491	0/0:15,0:16:29.96:0,30,341	0/0:21,0:22:28.95:0,29,453	0/0:19,0:19:32.89:0,33,314	0/0:25,0:28:47.30:0,47,421	1/1:3,27:32:59.69:834,60,0	0/0:24,0:24:47.95:0,48,465	1/1:4,0:28:49.91:171,50,0	1/1:5,18:27:68.11:850,68,0	0/0:25,0:26:63:0,63,601	0/0:27,0:28:64.45:0,64,617	0/0:11,0:12:20.90:0,21,253	0/0:16,0:18:26.77:0,27,361	0/0:20,0:20:44.97:0,45,425	0/0:11,0:11:26.90:0,27,242	1/1:1,21:24:44.12:582,44,0	0/1:7,16:26:4.61:519,0,5	1/1:11,22:35:57.41:758,57,0	1/1:1,11:13:6.50:414,7,0
chr10	3862599	.	AT	A	1993.87	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=10.444;DP=529;FS=10.406;HRun=6;HaplotypeScore=49.5718;InbreedingCoeff=0.9499;MQ=71.53;MQ0=0;MQRankSum=1.605;QD=25.56;ReadPosRankSum=0.402;VQSLOD=2.9131;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,33:36:90.23:964,90,0	0/0:5,0:5:15.05:0,15,194	0/0:10,0:10:7.92:0,8,85	0/0:7,1:8:11.93:0,12,102	0/0:31,0:31:86.97:0,87,1053	0/0:28,0:28:81.26:0,81,1047	0/0:21,0:21:60.18:0,60,751	0/0:28,0:28:78.23:0,78,966	0/0:14,0:14:42.12:0,42,519	0/0:22,0:22:60.16:0,60,722	0/0:14,0:14:39.12:0,39,492	0/0:16,0:16:45.13:0,45,568	0/0:21,0:21:60.15:0,60,733	0/0:12,0:12:33.09:0,33,412	0/0:30,0:30:84.20:0,84,1026	0/0:25,0:25:66.20:0,66,840	0/0:27,0:27:72.18:0,72,896	0/0:22,0:22:66.17:0,66,820	0/0:18,0:18:51.14:0,51,634	0/0:28,0:28:81.18:0,81,993	0/0:13,0:13:36.12:0,36,466	0/0:18,0:18:54.18:0,54,698	0/0:11,0:11:27.06:0,27,320	0/0:8,0:8:24.08:0,24,310	0/0:21,0:21:63.20:0,63,814	1/1:1,20:21:60.11:620,60,0	1/1:1,15:16:45.06:469,45,0	1/1:0,5:5:9.02:96,9,0
chr10	3863965	.	CCAGTCAG	C	2739.83	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.784;DP=654;FS=5.164;HRun=0;HaplotypeScore=160.4832;InbreedingCoeff=0.9906;MQ=87.61;MQ0=0;MQRankSum=-10.115;QD=46.44;ReadPosRankSum=1.942;VQSLOD=3.5731;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:96.33:0,96,3761	0/0:5,0:5:15.05:0,15,596	0/0:27,0:27:70.04:0,70,2386	0/0:21,0:21:54.57:0,55,1736	0/0:23,0:23:60.21:0,60,2230	0/0:18,0:18:51.16:0,51,1923	0/0:40,0:40:99:0,114,4326	0/0:26,0:26:75.25:0,75,2739	0/0:23,0:23:69.24:0,69,2707	0/0:20,0:20:54.19:0,54,2100	0/0:9,0:9:27.09:0,27,1020	0/0:24,0:24:69.24:0,69,2678	0/0:24,0:24:69.24:0,69,2707	0/0:31,0:31:93.31:0,93,3571	1/1:5,18:23:42.14:1090,42,0	0/0:34,0:34:96.33:0,96,3776	0/0:37,0:37:99:0,108,4140	1/1:4,21:25:51.18:1324,51,0	0/0:14,0:14:39.13:0,39,1413	0/0:19,0:19:57.18:0,57,2184	0/0:51,0:51:99:0,144,5536	0/0:17,0:17:42.13:0,42,1509	0/0:14,0:14:27.09:0,27,1065	0/0:25,0:25:75.26:0,75,2931	1/1:1,10:11:18.06:467,18,0	0/0:26,0:26:72.25:0,72,2768	0/0:23,0:23:60.21:0,60,2303	0/0:11,0:11:33.11:0,33,1319
chr10	3871831	.	C	CAAA	2924.03	PASS	AB=0.641;AC=17;AF=0.304;AN=56;BaseQRankSum=8.128;DP=471;FS=5.567;HRun=11;HaplotypeScore=88.5606;InbreedingCoeff=0.8315;MQ=50.42;MQ0=20;MQRankSum=-10.311;QD=17.83;ReadPosRankSum=-4.083;VQSLOD=1.3730;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:26,1:29:29.12:423,29,0	0/0:7,0:6:12.02:0,12,140	0/0:8,0:3:8.94:0,9,87	0/0:9,0:3:2.90:0,3,32	0/0:28,0:29:50.45:0,50,594	0/0:11,0:13:23.71:0,24,291	0/0:11,0:12:26.99:0,27,298	1/1:14,3:18:37.76:439,38,0	0/0:11,0:10:21.05:0,21,245	0/0:14,0:15:37.57:0,38,418	0/0:20,0:20:45.08:0,45,523	0/0:19,0:18:41.81:0,42,474	0/0:16,0:15:29.98:0,30,350	0/0:13,0:13:27.07:0,27,315	1/1:5,8:14:30.08:511,30,0	0/0:14,0:13:39.12:0,39,456	1/1:5,13:22:48.08:731,48,0	1/1:5,6:7:15.05:269,15,0	0/0:20,0:19:41.83:0,42,472	0/0:20,0:20:39:0,39,455	0/0:5,0:2:6.02:0,6,70	0/0:19,0:20:45.01:0,45,509	0/0:28,0:27:54.02:0,54,626	0/0:20,0:24:43.09:0,43,496	1/1:12,10:20:42.06:688,42,0	1/1:3,0:12:11.74:43,12,0	0/1:11,0:24:9.17:9,0,53	1/1:1,0:3:3.38:7,3,0
chr10	3871839	.	AAAAC	A	638.85	PASS	AB=0.976;AC=8;AF=0.143;AN=56;BaseQRankSum=9.231;DP=480;FS=1.841;HRun=0;HaplotypeScore=98.1631;InbreedingCoeff=0.0526;MQ=50.90;MQ0=21;MQRankSum=-9.155;QD=4.80;ReadPosRankSum=-2.809;VQSLOD=1.0104;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:29,3:30:27.84:300,0,28	0/0:7,0:7:14.98:0,15,292	0/0:8,0:3:8.86:0,9,126	0/0:10,0:3:3.01:0,3,32	0/0:31,0:30:71.52:0,72,1444	0/0:14,0:14:35.24:0,35,675	0/0:11,0:11:30.07:0,30,621	0/1:20,0:18:55.87:105,0,56	0/0:12,0:11:27.09:0,27,577	0/0:17,0:17:51.06:0,51,1058	0/0:21,0:21:57.02:0,57,1066	0/0:16,0:15:42.09:0,42,919	0/0:15,0:14:36.10:0,36,817	0/0:11,0:11:30.09:0,30,642	0/1:16,1:15:22.79:23,0,283	0/0:17,0:15:45.12:0,45,965	0/1:22,0:21:39.88:40,0,603	0/0:12,0:9:21.05:0,21,333	0/0:28,0:22:55.12:0,55,1085	0/0:19,0:19:48.08:0,48,1033	0/0:6,0:3:9.01:0,9,165	0/0:19,0:19:54.13:0,54,1110	0/0:23,0:23:57.01:0,57,1241	0/0:26,0:26:63.18:0,63,1238	0/0:24,0:21:13.35:0,13,712	0/1:15,0:15:77.76:100,0,78	0/1:23,0:22:99:163,0,204	1/1:4,0:3:6.83:43,7,0
chr10	3871840	.	AAAC	A	718.52	PASS	AB=0.934;AC=9;AF=0.161;AN=56;BaseQRankSum=9.168;DP=482;FS=1.112;HRun=0;HaplotypeScore=89.9268;InbreedingCoeff=0.0080;MQ=51.00;MQ0=21;MQRankSum=-9.187;QD=4.55;ReadPosRankSum=-2.623;VQSLOD=1.8018;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:23,9:30:24.35:396,0,24	0/0:7,0:7:14.97:0,15,249	0/0:8,0:3:8.06:0,8,106	0/0:10,0:3:2.96:0,3,19	0/0:32,0:31:76.40:0,76,1230	0/0:14,0:14:35.02:0,35,547	0/0:11,0:11:30.04:0,30,507	0/1:15,5:18:66.27:195,0,66	0/0:12,0:11:27.07:0,27,464	0/0:18,0:18:52.97:0,53,884	0/0:21,0:21:56.99:0,57,908	0/0:16,0:15:42.09:0,42,768	0/0:15,0:14:36.09:0,36,685	0/0:11,0:11:30.09:0,30,543	0/1:18,0:16:2.13:2,0,278	0/0:17,0:15:45.12:0,45,799	0/1:23,0:22:14.90:15,0,483	0/0:12,0:9:21.05:0,21,257	0/0:28,0:22:54.07:0,54,931	0/0:18,0:18:48.08:0,48,855	0/0:6,0:3:9.01:0,9,139	0/0:19,0:19:54.09:0,54,922	0/0:23,0:23:56.98:0,57,1020	0/0:26,0:26:63.16:0,63,1024	0/1:23,1:21:9.28:9,0,549	0/1:15,0:15:76.75:77,0,81	0/1:22,0:21:99:123,0,183	1/1:4,0:3:4.02:32,4,0
chr10	3871850	.	CAAAAACAA	C	2127.94	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=8.256;DP=477;FS=0.620;HRun=0;HaplotypeScore=131.5382;InbreedingCoeff=0.8940;MQ=55.23;MQ0=14;MQRankSum=-6.394;QD=23.13;ReadPosRankSum=-0.559;VQSLOD=3.1182;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:29:37.39:359,37,0	0/0:5,0:5:6.02:0,6,210	0/0:15,0:8:7.53:0,8,157	0/0:10,0:2:0:0,0,0	0/0:33,0:32:78.27:0,78,2759	0/0:12,0:12:30.10:0,30,1091	0/0:11,0:11:24.08:0,24,839	1/1:21,0:19:11.55:234,12,0	0/0:13,0:13:33.11:0,33,966	0/0:19,0:19:48.15:0,48,1820	0/0:19,0:19:42.13:0,42,1438	0/0:17,0:17:36.11:0,36,1057	0/0:11,0:11:30.05:0,30,977	0/0:11,0:11:24.08:0,24,767	0/0:16,0:15:21.06:0,21,652	0/0:20,0:19:42.11:0,42,1371	0/0:24,0:24:54.18:0,54,1703	0/0:11,0:10:24.08:0,24,713	0/0:26,0:19:27.05:0,27,698	0/0:19,0:19:48.16:0,48,1607	0/0:7,0:4:9.03:0,9,317	0/0:18,0:18:33.11:0,33,1031	0/0:21,0:22:54.18:0,54,1983	0/0:23,0:23:51.15:0,51,1565	0/0:22,0:20:48.16:0,48,1404	1/1:8,4:13:27.09:607,27,0	1/1:6,14:20:33.11:817,33,0	1/1:4,2:5:12.04:279,12,0
chr10	3871872	.	C	CAA	1366.55	PASS	AB=1.000;AC=10;AF=0.179;AN=56;BaseQRankSum=1.053;DP=486;FS=3.788;HRun=9;HaplotypeScore=83.8089;InbreedingCoeff=0.7279;MQ=60.78;MQ0=11;MQRankSum=-3.647;QD=14.38;ReadPosRankSum=-0.436;VQSLOD=1.6985;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:24:28.33:0,28,283	1/1:0,0:4:4.99:17,5,0	0/1:22,0:16:21.07:21,0,202	0/1:13,0:5:8.34:8,0,43	0/0:33,0:34:87.12:0,87,955	0/0:15,0:15:39.07:0,39,415	0/0:12,0:12:33.05:0,33,340	0/0:20,0:19:45.07:0,45,454	0/0:14,0:14:36.08:0,36,380	0/0:17,0:17:48.11:0,48,506	0/0:23,0:23:54.06:0,54,565	0/0:12,0:12:27.06:0,27,287	0/0:11,0:10:21.04:0,21,223	0/0:15,0:15:36.05:0,36,375	1/1:6,10:14:27.09:407,27,0	0/0:22,0:21:54.07:0,54,559	0/0:26,0:26:63.13:0,63,656	1/1:3,12:15:21.07:323,21,0	0/0:21,0:15:30.02:0,30,307	0/0:26,0:26:72.17:0,72,765	0/0:6,0:6:18.03:0,18,183	0/0:15,0:15:35.86:0,36,356	0/0:22,0:22:57.11:0,57,598	0/0:19,0:19:36.02:0,36,370	1/1:7,18:23:51:750,51,0	0/0:11,0:11:29.70:0,30,227	0/0:17,0:17:38.42:0,38,265	0/0:7,0:6:14.91:0,15,130
chr10	3873912	.	G	GTTAT	2439.90	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-9.084;DP=674;FS=1.435;HRun=0;HaplotypeScore=105.2385;InbreedingCoeff=0.9880;MQ=85.33;MQ0=0;MQRankSum=-4.451;QD=59.51;ReadPosRankSum=2.729;VQSLOD=5.5150;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,34:41:96.33:2535,96,0	0/0:11,0:11:30.10:0,30,552	0/0:26,0:26:59.73:0,60,1002	0/0:18,0:18:16.95:0,17,555	0/0:22,0:22:63.22:0,63,1154	0/0:11,0:11:33.11:0,33,607	0/0:22,0:22:63.20:0,63,1128	0/0:31,0:31:87.30:0,87,1601	0/0:19,0:19:54.19:0,54,994	0/0:30,0:29:84.26:0,84,1486	0/0:20,0:20:54.18:0,54,994	0/0:31,0:31:81.26:0,81,1460	0/0:23,0:23:66.23:0,66,1207	0/0:20,0:20:60.21:0,60,1104	0/0:32,0:32:84.29:0,84,1545	0/0:36,0:36:99:0,99,1793	0/0:38,0:38:99:0,114,2043	0/0:22,0:22:60.21:0,60,1104	0/0:23,0:23:63.18:0,63,1031	0/0:25,0:25:72.23:0,72,1283	0/0:23,0:23:63.20:0,63,1119	0/0:24,0:24:60.20:0,60,1104	0/0:17,0:17:45.14:0,45,786	0/0:35,0:35:99:0,102,1866	0/0:16,0:16:42.14:0,42,762	0/0:24,0:24:57.18:0,57,993	0/0:25,0:24:69.22:0,69,1229	0/0:9,0:9:27.04:0,27,430
chr10	3875069	.	ACC	A	2015.32	PASS	AB=0.698;AC=10;AF=0.179;AN=56;BaseQRankSum=10.382;DP=632;FS=22.369;HRun=3;HaplotypeScore=88.2211;InbreedingCoeff=0.0117;MQ=51.67;MQ0=75;MQRankSum=-4.132;QD=14.00;ReadPosRankSum=-0.486;VQSLOD=-0.4824;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:17,10:25:99:316,0,239	0/0:7,0:7:21.07:0,21,405	0/0:32,0:2:3.01:0,3,57	0/0:32,0:5:6:0,6,80	0/0:18,0:18:48.16:0,48,927	0/0:23,0:23:60.19:0,60,1113	0/0:31,0:27:72.17:0,72,1308	0/1:14,2:6:54.67:55,0,214	0/0:18,0:18:37.88:0,38,712	0/0:20,0:20:60.19:0,60,1085	0/0:22,0:22:66.23:0,66,1270	0/0:35,0:34:89.65:0,90,1679	0/0:28,0:27:72.19:0,72,1282	0/0:22,0:21:60.21:0,60,1142	0/1:6,14:20:26.30:422,0,26	0/0:25,0:25:66.23:0,66,1274	0/1:7,8:14:95.98:374,0,96	0/1:2,11:12:7.14:297,0,7	0/0:33,0:11:27.08:0,27,488	0/0:27,0:26:75.26:0,75,1436	0/0:51,0:50:99:0,141,2699	0/0:20,0:19:48.16:0,48,916	0/0:10,0:10:27.09:0,27,522	0/0:33,0:33:90.31:0,90,1739	0/1:4,10:14:75.61:77,0,76	0/1:19,0:19:99:232,0,164	0/1:5,10:15:64.96:250,0,65	1/1:0,5:5:9.03:138,9,0
chr10	3880140	.	GCACACA	G	2054.22	PASS	AB=0.854;AC=16;AF=0.308;AN=52;BaseQRankSum=5.681;DP=565;FS=1.838;HRun=0;HaplotypeScore=145.4580;InbreedingCoeff=0.7525;MQ=53.14;MQ0=6;MQRankSum=-0.565;QD=12.45;ReadPosRankSum=3.754;VQSLOD=2.8044;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:33,1:33:18.02:219,18,0	0/0:7,0:7:12.04:0,12,324	./.	./.	0/0:23,0:23:48.11:0,48,1174	0/0:23,0:24:48.60:0,49,1031	0/0:34,0:35:49.76:0,50,1604	1/1:15,0:12:14.29:203,14,0	0/0:14,0:14:32.07:0,32,775	0/0:16,0:16:42.09:0,42,1111	0/0:14,0:15:30.10:0,30,833	0/0:20,0:23:45.14:0,45,1134	0/0:18,0:20:51.13:0,51,1282	0/0:18,1:19:40.43:0,40,802	1/1:18,0:18:10.44:356,10,0	0/0:16,0:17:44.45:0,44,1246	0/1:18,3:21:31.43:198,0,31	1/1:18,6:24:51.59:931,52,0	0/0:21,0:21:41.22:0,41,587	0/0:10,0:10:21.04:0,21,380	0/0:64,0:62:99:0,117,2774	0/0:18,0:21:36.10:0,36,832	0/0:10,0:9:15.03:0,15,342	0/0:47,0:47:99:0,111,3150	1/1:15,5:20:22.33:266,22,0	0/1:12,1:13:37.29:37,0,52	1/1:2,0:11:9.41:23,9,0	1/1:3,0:7:1.77:3,2,0
chr10	3880160	.	ACACG	A	1255.94	PASS	AB=1.000;AC=14;AF=0.269;AN=52;BaseQRankSum=8.704;DP=605;FS=1.555;HRun=0;HaplotypeScore=134.9922;InbreedingCoeff=0.5930;MQ=49.24;MQ0=33;MQRankSum=-1.990;QD=7.80;ReadPosRankSum=-1.574;VQSLOD=2.8335;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:27,9:34:17.68:202,18,0	0/0:7,0:6:15.02:0,15,276	./.	./.	0/0:25,0:24:54.38:0,54,921	0/0:24,0:23:27.27:0,27,700	0/0:37,0:31:43.70:0,44,1246	1/1:5,7:8:23.85:319,24,0	0/0:17,0:16:25.86:0,26,684	0/0:23,0:22:61.48:0,61,949	0/0:17,0:16:31.86:0,32,663	0/0:23,0:22:50.36:0,50,782	0/0:24,0:23:38.04:0,38,978	0/0:23,0:21:29.82:0,30,647	1/1:14,0:12:4.03:123,4,0	0/1:21,0:21:26.34:26,0,958	0/0:17,0:15:6.20:0,6,68	1/1:25,0:24:25.88:199,26,0	0/0:21,0:20:17.89:0,18,240	0/0:14,0:11:17.70:0,18,258	0/0:85,0:74:49.96:0,50,1954	0/0:25,0:24:30:0,30,753	0/0:8,0:6:14.21:0,14,255	0/0:50,0:49:99:0,103,2513	0/1:18,0:16:4.15:59,0,4	0/1:17,0:14:15.76:164,0,16	1/1:11,0:11:16.63:288,17,0	0/1:7,0:7:9.98:48,0,10
chr10	3880190	.	ATG	A	450.17	PASS	AB=0.950;AC=12;AF=0.231;AN=52;BaseQRankSum=8.661;DP=594;FS=7.712;HRun=0;HaplotypeScore=118.9865;InbreedingCoeff=0.4796;MQ=48.51;MQ0=49;MQRankSum=-5.385;QD=3.04;ReadPosRankSum=-4.211;VQSLOD=0.3598;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:22,6:26:2.48:36,2,0	0/0:8,0:8:15.05:0,15,267	./.	./.	0/0:21,0:20:45.13:0,45,786	0/0:25,0:24:40.58:0,41,782	0/0:30,0:24:49.35:0,49,1056	1/1:9,1:3:8.83:68,9,0	0/0:16,0:15:39.59:0,40,716	0/0:30,0:26:77.85:0,78,1461	0/0:14,1:14:27.08:0,27,501	0/0:21,0:20:22.04:0,22,823	0/0:27,1:26:72.20:0,72,1299	0/0:26,0:23:51.25:0,51,904	0/1:13,0:10:1.92:3,0,2	0/0:20,0:20:11.42:0,11,629	0/1:15,5:17:9.76:65,0,10	1/1:14,7:19:10.53:211,11,0	0/0:16,0:14:42.08:0,42,712	0/0:12,0:9:21.07:0,21,415	0/0:85,1:75:99:0,155,2722	0/0:24,0:22:57.19:0,57,1112	0/0:8,0:7:15.05:0,15,286	0/0:45,0:44:99:0,114,2074	1/1:17,4:19:1.71:39,2,0	0/1:21,0:15:53:93,0,53	0/1:14,0:14:80.91:81,0,105	0/0:7,0:7:6.01:0,6,59
chr10	3880206	.	GCA	G	1029.37	PASS	AB=0.944;AC=21;AF=0.375;AN=56;BaseQRankSum=5.034;DP=625;FS=4.279;HRun=0;HaplotypeScore=97.0930;InbreedingCoeff=0.2817;MQ=49.82;MQ0=47;MQRankSum=0.947;QD=2.98;ReadPosRankSum=0.573;VQSLOD=2.1042;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:24:2.13:2,0,22	0/1:7,1:8:23.50:24,0,126	0/0:16,0:4:11.97:0,12,105	0/0:21,0:8:8.86:0,9,136	0/1:15,2:17:49.14:49,0,182	0/0:8,0:27:30:0,30,268	0/1:26,2:22:32.09:32,0,403	1/1:14,0:8:7.75:151,8,0	0/0:15,0:14:24.04:0,24,330	0/1:33,0:30:36.10:36,0,661	0/0:15,0:14:14.86:0,15,155	0/0:20,0:19:14.90:0,15,498	0/0:25,1:24:9.59:0,10,568	0/0:24,0:22:18.07:0,18,580	1/1:4,13:15:9.03:106,9,0	0/1:16,1:17:11.44:11,0,293	1/1:7,10:13:12.04:142,12,0	1/1:4,12:15:23.81:282,24,0	0/0:12,1:16:6.17:0,6,419	0/0:13,0:11:21.01:0,21,270	0/1:84,10:85:37.75:38,0,1462	0/0:26,1:25:12.57:0,13,596	0/0:9,0:8:21.07:0,21,308	0/0:47,1:48:7.05:0,7,1088	1/1:4,13:15:8.80:106,9,0	1/1:21,1:15:5.05:98,5,0	0/1:9,0:9:12.28:73,0,12	0/1:8,0:8:0.29:60,0,0
chr10	3883805	.	TC	T	4956.35	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=9.665;DP=508;FS=0.748;HRun=7;HaplotypeScore=57.0463;InbreedingCoeff=0.9908;MQ=77.33;MQ0=0;MQRankSum=0.076;QD=25.68;ReadPosRankSum=0.052;VQSLOD=5.2795;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,31:32:93.21:949,93,0	0/0:6,0:6:12.03:0,12,136	0/0:19,0:19:39.76:0,40,414	0/0:17,0:16:19.17:0,19,261	0/0:24,0:24:69.20:0,69,852	0/0:18,0:18:45.14:0,45,565	0/0:13,0:13:30.09:0,30,365	1/1:5,25:30:75.12:740,75,0	0/0:13,0:13:36.11:0,36,451	0/0:24,0:24:63.20:0,63,789	0/0:15,0:15:39.12:0,39,491	0/0:18,0:18:51.12:0,51,624	0/0:14,0:14:33.11:0,33,415	0/0:14,0:14:39.11:0,39,478	1/1:4,26:30:75.17:765,75,0	0/0:22,0:22:57.17:0,57,703	1/1:2,19:21:54.12:551,54,0	1/1:0,8:8:21.05:214,21,0	0/0:14,0:14:39.12:0,39,488	0/0:17,0:17:44.16:0,44,520	0/0:17,0:17:45.13:0,45,553	0/0:7,0:7:15.01:0,15,171	0/0:17,0:17:51.15:0,51,629	0/0:26,0:26:72.22:0,72,890	1/1:0,21:21:54.12:550,54,0	1/1:2,11:13:33.06:331,33,0	1/1:1,18:19:41.75:428,42,0	1/1:4,15:19:42.09:428,42,0
chr10	3885663	.	AG	A	801.01	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=2.723;DP=490;FS=3.491;HRun=1;HaplotypeScore=53.0249;InbreedingCoeff=0.8300;MQ=64.91;MQ0=25;MQRankSum=-3.780;QD=8.09;ReadPosRankSum=-4.414;VQSLOD=-0.7174;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:25,1:25:31.10:175,31,0	0/0:7,0:7:17.98:0,18,161	0/0:42,0:18:33.85:0,34,268	0/0:29,0:11:18.89:0,19,158	0/0:24,3:27:31.20:0,31,381	0/0:14,1:15:32.03:0,32,260	0/0:21,0:20:47.51:0,48,418	1/1:6,18:21:43.38:348,43,0	0/0:9,0:9:17.10:0,17,133	0/0:18,0:17:43.85:0,44,372	0/0:7,0:5:5.62:0,6,53	0/0:16,0:16:0.27:0,0,121	0/0:13,0:11:23.24:0,23,176	0/0:10,0:9:20.69:0,21,162	0/0:15,0:13:35.55:0,36,273	0/0:12,0:10:28.95:0,29,205	0/0:38,0:37:40.77:0,41,499	0/0:23,0:21:48.60:0,49,309	0/0:16,0:14:28.65:0,29,274	0/0:12,1:13:29.66:0,30,238	0/1:14,0:14:1.38:1,0,163	0/0:14,0:13:32.02:0,32,261	0/0:12,0:10:26.87:0,27,235	0/0:21,0:20:25.89:0,26,207	0/0:13,0:13:28.74:0,29,206	1/1:20,0:20:31.54:308,32,0	1/1:9,2:8:13.18:93,13,0	1/1:3,0:4:8.58:44,9,0
chr10	3887286	.	TCC	T	9763.38	PASS	AB=0.526;AC=17;AF=0.304;AN=56;BaseQRankSum=13.284;DP=742;FS=7.735;HRun=3;HaplotypeScore=93.7116;InbreedingCoeff=0.9073;MQ=75.89;MQ0=2;MQRankSum=-5.184;QD=38.29;ReadPosRankSum=3.171;VQSLOD=4.0249;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,45:46:99:1943,129,0	0/0:10,0:10:30.08:0,30,505	0/0:26,0:26:69.16:0,69,1126	0/0:35,0:34:71.80:0,72,1340	0/0:22,0:22:53.75:0,54,1155	0/0:17,0:17:51.16:0,51,932	0/0:30,0:30:87.25:0,87,1514	1/1:1,39:40:99:1623,117,0	0/0:25,0:25:49.37:0,49,1243	0/0:23,0:23:68.16:0,68,1022	0/0:14,0:14:42.10:0,42,705	0/0:22,0:22:65.57:0,66,1159	0/0:41,0:41:99:0,120,2121	0/0:32,0:32:93.28:0,93,1665	1/1:1,31:31:84.24:1259,84,0	0/0:32,0:32:96.31:0,96,1790	1/1:2,29:31:78.22:1167,78,0	1/1:0,18:18:54.18:826,54,0	0/0:22,0:22:60.04:0,60,1013	0/0:15,0:15:10.42:0,10,626	0/0:33,0:33:96.15:0,96,1590	0/0:24,0:24:72.14:0,72,1162	0/0:19,0:19:57.17:0,57,1035	0/0:44,0:44:99:0,126,2233	1/1:1,17:17:39.12:575,39,0	0/1:3,27:30:83.62:1041,0,84	1/1:0,30:30:69.23:1055,69,0	1/1:1,9:10:18.06:275,18,0
chr10	3887288	.	CCT	C	4130.25	PASS	AB=0.936;AC=19;AF=0.339;AN=56;BaseQRankSum=17.810;DP=743;FS=7.655;HRun=0;HaplotypeScore=114.2429;InbreedingCoeff=0.7712;MQ=76.10;MQ0=2;MQRankSum=-4.908;QD=13.95;ReadPosRankSum=2.078;VQSLOD=2.7596;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:47,0:47:99:902,125,0	0/0:10,0:10:24.07:0,24,376	0/0:27,0:26:65.43:0,65,1015	0/0:39,0:37:48.84:0,49,1084	0/0:22,1:23:28.04:0,28,1008	0/0:17,0:17:48.16:0,48,802	0/0:28,0:28:72.23:0,72,1179	1/1:40,0:40:73.08:533,73,0	0/1:23,2:25:7.13:7,0,985	0/0:23,0:23:42.14:0,42,691	0/0:13,0:13:33.11:0,33,547	0/0:22,0:22:60.20:0,60,987	0/0:41,0:41:99:0,105,1728	0/0:32,0:32:84.27:0,84,1373	1/1:32,0:31:82.98:563,83,0	0/0:32,0:32:90.31:0,90,1500	1/1:31,0:31:77.15:538,77,0	1/1:18,0:18:53.55:379,54,0	0/0:22,0:22:51.11:0,51,795	0/1:13,2:15:37.12:37,0,507	0/0:32,0:32:72.25:0,72,1204	0/0:23,0:23:54.18:0,54,891	0/0:19,0:19:51.17:0,51,852	0/0:44,0:44:99:0,117,1918	1/1:17,0:16:35.71:255,36,0	0/1:30,0:30:76.96:323,0,77	1/1:31,0:31:46.54:466,47,0	1/1:10,0:10:17.86:127,18,0
chr10	3889024	.	TA	T	1366.81	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.252;DP=675;FS=3.682;HRun=4;HaplotypeScore=75.5022;InbreedingCoeff=0.9990;MQ=79.70;MQ0=0;MQRankSum=-4.535;QD=31.79;ReadPosRankSum=0.613;VQSLOD=4.2116;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,41:43:99:1462,123,0	0/0:10,0:10:30.10:0,30,420	0/0:17,0:16:36.10:0,36,433	0/0:20,0:20:41.67:0,42,575	0/0:26,0:26:72.24:0,72,1004	0/0:23,0:23:69.22:0,69,951	0/0:18,0:18:54.18:0,54,753	0/0:26,0:26:63.21:0,63,882	0/0:29,0:29:87.29:0,87,1218	0/0:27,0:27:78.25:0,78,1076	0/0:13,0:13:39.13:0,39,545	0/0:32,0:32:96.31:0,96,1327	0/0:22,0:22:66.22:0,66,923	0/0:27,0:27:81.26:0,81,1119	0/0:29,0:29:87.26:0,87,1183	0/0:25,0:25:75.24:0,75,1034	0/0:40,0:40:99:0,120,1678	0/0:24,0:24:69.23:0,69,966	0/0:27,0:27:75.22:0,75,991	0/0:17,0:17:51.16:0,51,699	0/0:28,0:28:84.28:0,84,1176	0/0:24,0:24:66.22:0,66,923	0/0:18,0:18:51.14:0,51,694	0/0:31,0:31:93.31:0,93,1302	0/0:18,0:18:48.15:0,48,656	0/0:24,0:24:72.24:0,72,1008	0/0:26,0:25:75.25:0,75,1042	0/0:11,0:11:33.10:0,33,443
chr10	3889383	.	T	TA	9692.01	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-16.619;DP=696;FS=3.383;HRun=2;HaplotypeScore=65.6787;InbreedingCoeff=0.9998;MQ=86.35;MQ0=0;MQRankSum=-7.880;QD=38.61;ReadPosRankSum=4.002;VQSLOD=5.5134;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,50:52:99:1986,138,0	0/0:11,0:11:33.09:0,33,395	0/0:23,0:23:60.19:0,60,738	0/0:26,0:26:72.07:0,72,830	0/0:17,0:17:47.92:0,48,557	0/0:18,0:18:51.12:0,51,605	0/0:24,0:24:69.20:0,69,840	1/1:0,23:23:66.16:862,66,0	0/0:28,0:28:81.24:0,81,991	0/0:23,0:23:66.20:0,66,810	0/0:11,0:11:33.08:0,33,393	0/0:26,0:26:78.25:0,78,967	0/0:23,0:23:66.19:0,66,804	0/0:25,0:25:75.21:0,75,905	1/1:1,25:26:66.22:950,66,0	0/0:26,0:26:72.19:0,72,857	1/1:0,23:23:66.22:950,66,0	1/1:1,33:34:93.31:1339,93,0	0/0:17,0:17:51.15:0,51,619	0/0:17,0:17:51.16:0,51,632	0/0:66,0:66:99:0,187,2244	0/0:21,0:21:57.18:0,57,706	0/0:19,0:19:57.16:0,57,682	0/0:24,0:24:63.20:0,63,780	1/1:1,23:24:63.21:907,63,0	1/1:2,28:30:84.26:1186,84,0	1/1:1,28:29:78.26:1123,78,0	1/1:0,10:10:27.09:389,27,0
chr10	3889512	.	TG	T	4489.03	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=9.427;DP=654;FS=11.416;HRun=2;HaplotypeScore=65.8884;InbreedingCoeff=0.9966;MQ=78.56;MQ0=0;MQRankSum=-2.781;QD=39.04;ReadPosRankSum=4.462;VQSLOD=4.5530;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,150,2364	0/0:7,0:7:21.07:0,21,336	0/0:13,0:13:39.13:0,39,615	0/0:24,0:24:64.16:0,64,916	0/0:17,0:17:51.17:0,51,813	0/0:18,0:18:54.18:0,54,863	0/0:31,0:31:93.32:0,93,1478	0/0:24,0:24:66.22:0,66,1033	0/0:25,0:25:75.26:0,75,1199	0/0:14,0:14:39.12:0,39,601	0/0:15,0:15:45.15:0,45,714	0/0:30,0:30:87.30:0,87,1375	0/0:18,0:18:54.18:0,54,853	0/0:34,0:34:99:0,102,1601	1/1:0,21:21:57.19:797,57,0	0/0:25,0:25:75.23:0,75,1153	1/1:0,31:31:90.30:1259,90,0	1/1:0,38:38:99:1468,105,0	0/0:25,0:25:72.24:0,72,1129	0/0:15,0:15:45.15:0,45,716	0/0:39,0:39:99:0,117,1868	0/0:23,0:23:66.23:0,66,1054	0/0:16,0:16:48.16:0,48,766	0/0:30,0:30:90.31:0,90,1437	1/1:0,25:25:69.23:965,69,0	0/0:15,0:15:39.13:0,39,624	0/0:25,0:25:75.26:0,75,1188	0/0:6,0:6:18.06:0,18,288
chr10	3894224	.	C	CA	1331.28	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=10.379;DP=724;FS=0.000;HRun=2;HaplotypeScore=109.4132;InbreedingCoeff=0.9945;MQ=93.42;MQ0=0;MQRankSum=-10.087;QD=23.36;ReadPosRankSum=3.010;VQSLOD=3.4457;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,141,1734	0/0:14,0:14:42.13:0,42,520	0/0:35,0:35:99:0,105,1285	0/0:32,0:32:87.23:0,87,1043	0/0:13,0:13:39.12:0,39,483	0/0:31,0:31:84.26:0,84,1041	0/0:24,0:24:69.18:0,69,829	0/0:31,0:31:87.27:0,87,1068	0/0:28,0:28:84.25:0,84,1028	0/0:34,0:34:96.30:0,96,1189	0/0:16,0:16:45.14:0,45,558	0/0:26,0:26:75.24:0,75,929	0/0:33,0:33:96.30:0,96,1190	0/0:28,0:28:78.23:0,78,954	1/1:6,17:23:54.17:685,54,0	0/0:26,0:26:75.22:0,75,917	1/1:5,8:13:15.47:166,15,0	1/1:2,7:9:21.07:287,21,0	0/0:33,0:33:87.27:0,87,1078	0/0:22,0:22:63.20:0,63,781	0/0:42,0:42:99:0,123,1512	0/0:34,0:34:96.26:0,96,1151	0/0:24,0:24:72.23:0,72,893	0/0:20,0:20:60.19:0,60,744	1/1:3,9:12:27.09:351,27,0	0/0:24,0:24:69.21:0,69,844	0/0:36,0:36:99:0,105,1286	0/0:13,0:13:39.12:0,39,483
chr10	3894230	.	AACTCCAAGGCTGCTGT	A	5316.79	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=10.459;DP=714;FS=0.609;HRun=0;HaplotypeScore=321.7349;InbreedingCoeff=0.9938;MQ=94.54;MQ0=0;MQRankSum=-10.125;QD=126.59;ReadPosRankSum=3.295;VQSLOD=4.1293;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,151,11416	0/0:14,0:14:42.14:0,42,2827	0/0:35,0:35:99:0,105,6485	0/0:33,0:33:99:0,99,5782	0/0:14,0:14:42.14:0,42,3358	0/0:29,0:29:87.30:0,87,6742	0/0:19,0:19:57.20:0,57,4247	0/0:32,0:32:93.32:0,93,5986	0/0:30,0:30:90.31:0,90,6759	0/0:34,0:34:99:0,102,7894	0/0:17,0:17:51.18:0,51,3711	0/0:24,0:24:72.25:0,72,5459	0/0:31,0:31:93.29:0,93,6591	0/0:25,0:25:75.26:0,75,6017	1/1:1,17:18:54.18:2446,54,0	0/0:28,0:28:84.29:0,84,6242	1/1:0,8:8:14.71:577,15,0	1/1:0,7:7:21.07:1012,21,0	0/0:35,0:35:99:0,102,6651	0/0:23,0:23:69.24:0,69,4854	0/0:46,0:46:99:0,138,10569	0/0:31,0:31:93.32:0,93,6688	0/0:26,0:26:78.25:0,78,5242	0/0:21,0:21:63.17:0,63,4324	1/1:0,9:9:27.09:1282,27,0	0/0:24,0:24:72.25:0,72,4105	0/0:37,0:37:99:0,108,6174	0/0:13,0:13:39.13:0,39,2481
chr10	3894237	.	AG	A	2739.58	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=13.607;DP=723;FS=3.980;HRun=2;HaplotypeScore=103.3910;InbreedingCoeff=0.9787;MQ=93.34;MQ0=0;MQRankSum=-7.119;QD=22.64;ReadPosRankSum=5.154;VQSLOD=3.6547;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,153,2229	0/0:17,0:17:45.10:0,45,628	0/0:33,0:33:96.31:0,96,1404	0/0:33,0:33:80.36:0,80,1227	0/0:16,0:16:48.15:0,48,698	0/0:30,0:30:87.27:0,87,1282	0/0:19,0:19:57.19:0,57,853	0/0:29,0:29:81.26:0,81,1175	0/0:30,0:30:87.29:0,87,1303	0/0:36,0:36:99:0,105,1571	0/0:19,0:19:54.17:0,54,787	0/0:25,0:25:75.23:0,75,1101	0/0:29,0:29:81.27:0,81,1212	0/0:27,0:27:81.21:0,81,1167	1/1:17,0:17:37.74:120,38,0	0/0:28,0:28:84.26:0,84,1219	1/1:8,0:8:6.47:21,6,0	1/1:7,0:7:15.54:49,16,0	0/0:37,0:37:99:0,102,1522	0/0:22,0:22:60.19:0,60,878	0/0:46,0:46:99:0,138,2058	0/0:32,0:32:87.28:0,87,1279	0/0:23,0:23:63.21:0,63,929	0/0:20,0:20:57.19:0,57,851	1/1:9,0:9:19.98:64,20,0	1/1:3,25:28:33.28:927,33,0	1/1:1,35:36:96.31:1246,96,0	1/1:0,16:16:39.13:506,39,0
chr10	3896188	.	CTCTG	C	57.06	PASS	AB=0.951;AC=8;AF=0.143;AN=56;BaseQRankSum=5.500;DP=391;FS=17.943;HRun=0;HaplotypeScore=68.9946;InbreedingCoeff=-0.0537;MQ=51.71;MQ0=26;MQRankSum=-3.595;QD=0.70;ReadPosRankSum=1.299;VQSLOD=0.2332;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:26:22.66:0,23,291	0/1:4,0:4:3.47:3,0,41	0/0:21,0:7:11.45:0,11,92	0/0:27,0:10:15.27:0,15,144	0/0:19,0:19:29.95:0,30,246	0/0:11,0:11:7.41:0,7,140	0/0:15,0:14:20.63:0,21,157	0/0:22,0:21:58.14:0,58,448	0/0:12,0:12:22.45:0,22,179	0/0:23,0:22:17.39:0,17,392	0/0:15,0:15:26.36:0,26,185	0/1:6,0:5:29.74:30,0,59	0/0:13,0:12:26.23:0,26,190	0/1:7,0:7:13.50:13,0,71	0/0:11,0:11:1.23:0,1,5	0/1:12,1:11:20.77:21,0,144	0/0:18,0:15:0.47:0,0,1	0/1:13,1:11:47.73:50,0,48	0/1:6,3:7:49.33:49,0,83	0/0:10,0:10:20.97:0,21,174	0/0:13,0:11:13.25:0,13,118	0/0:14,0:14:26.01:0,26,177	0/0:8,0:7:13.91:0,14,105	0/0:16,0:16:15.38:0,15,114	0/1:15,0:15:4.67:5,0,6	0/1:14,0:14:7.23:7,0,188	0/0:9,0:6:7.56:0,8,115	0/0:2,0:1:2.60:0,3,10
chr10	3896192	.	G	GACAC	601.44	PASS	AB=0.800;AC=8;AF=0.143;AN=56;BaseQRankSum=0.318;DP=406;FS=0.000;HRun=0;HaplotypeScore=78.5123;InbreedingCoeff=0.5900;MQ=54.16;MQ0=19;MQRankSum=-0.497;QD=7.81;ReadPosRankSum=1.392;VQSLOD=1.3881;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:26:41.72:0,42,649	0/0:4,0:4:9.02:0,9,128	0/0:23,0:8:15.51:0,16,207	0/0:29,0:11:23.16:0,23,315	0/0:19,0:19:30.10:0,30,497	0/0:11,0:12:24.08:0,24,373	0/0:14,0:14:24.04:0,24,347	0/0:20,0:20:42.11:0,42,607	0/1:12,0:14:9.22:9,0,408	0/0:19,0:22:42.13:0,42,651	0/0:14,0:17:29.97:0,30,429	0/0:8,0:7:15.04:0,15,224	0/0:15,0:15:26.74:0,27,419	0/0:7,0:8:18:0,18,222	0/1:4,6:12:0:0,0,0	0/0:13,0:12:0.42:0,0,390	1/1:10,10:18:2.92:69,3,0	1/1:7,6:13:6.02:145,6,0	0/0:9,0:8:15.05:0,15,244	0/0:10,0:10:21.07:0,21,348	0/0:12,0:12:15.04:0,15,227	0/0:13,0:14:30.10:0,30,472	0/0:8,0:7:15.05:0,15,248	0/0:16,0:16:15.01:0,15,249	1/1:14,2:16:29.06:504,29,0	0/0:13,0:13:21.03:0,21,348	0/0:10,0:7:12.04:0,12,199	0/0:2,0:1:3.01:0,3,50
chr10	3896312	.	GT	G	3110.87	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=8.245;DP=514;FS=8.781;HRun=1;HaplotypeScore=51.8733;InbreedingCoeff=0.9951;MQ=81.64;MQ0=0;MQRankSum=-1.539;QD=34.57;ReadPosRankSum=0.171;VQSLOD=2.7008;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,105,1653	0/0:6,0:6:18.05:0,18,262	0/0:13,0:13:32.95:0,33,473	0/0:16,0:16:45.10:0,45,641	0/0:15,0:15:45.15:0,45,718	0/0:15,0:15:39.12:0,39,597	0/0:17,0:17:48.14:0,48,721	0/0:15,0:15:45.11:0,45,691	0/0:21,0:21:63.21:0,63,1003	0/0:26,0:26:72.24:0,72,1134	0/0:6,0:6:18.06:0,18,287	0/0:17,0:16:48.16:0,48,766	0/0:24,0:24:66.21:0,66,1028	0/0:11,0:11:33.11:0,33,527	1/1:0,21:21:57.19:797,57,0	0/0:24,0:23:66.21:0,66,1031	1/1:0,34:34:87.29:1216,87,0	1/1:0,15:15:42.14:587,42,0	0/0:12,0:12:36.11:0,36,551	0/0:25,0:25:75.24:0,75,1175	0/0:17,0:17:48.16:0,48,767	0/0:16,0:16:48.15:0,48,741	0/0:19,0:19:57.17:0,57,873	0/0:23,0:23:57.15:0,57,883	1/1:0,20:20:48.16:671,48,0	0/0:24,0:24:72.25:0,72,1149	0/0:16,0:16:45.14:0,45,696	0/0:10,0:10:30.10:0,30,471
chr10	3903084	.	CTCA	C	35.23	PASS	AB=0.837;AC=2;AF=0.111;AN=18;BaseQRankSum=3.655;DP=63;FS=7.898;HRun=0;HaplotypeScore=42.9642;MQ=80.81;MQ0=0;MQRankSum=0.246;QD=1.68;ReadPosRankSum=1.458;VQSLOD=0.1564;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/1:10,0:7:49.97:50,0,101	0/0:7,0:4:18:0,18,219	./.	./.	./.	0/0:14,0:14:7.12:0,7,471	./.	0/0:1,0:1:3:0,3,28	./.	./.	./.	0/0:2,0:2:2.97:0,3,37	./.	./.	0/1:6,3:9:58.29:62,0,58	0/0:6,1:7:14.84:0,15,229	./.	./.	./.	./.	./.	./.	./.	0/0:3,0:3:8.95:0,9,117	0/0:4,0:4:6.02:0,6,99	./.
chr10	3903176	.	A	AC	741.83	PASS	AC=8;AF=0.148;AN=54;BaseQRankSum=-0.351;DP=209;FS=36.641;HRun=5;HaplotypeScore=30.2529;InbreedingCoeff=0.8706;MQ=76.90;MQ0=1;MQRankSum=-4.577;QD=25.58;ReadPosRankSum=1.558;VQSLOD=1.2061;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:5:11.80:0,12,90	0/0:4,0:4:9:0,9,87	0/0:18,0:14:28.59:0,29,366	0/0:17,0:12:23.30:0,23,298	0/0:9,0:9:27.05:0,27,281	0/0:4,0:4:12.02:0,12,121	0/0:5,0:5:15.02:0,15,152	0/0:23,0:23:58.31:0,58,360	0/0:8,0:8:24.06:0,24,258	0/0:5,0:5:15.03:0,15,155	0/0:6,0:6:18.05:0,18,193	0/0:5,0:5:11.86:0,12,120	./.	0/0:7,0:7:21.04:0,21,218	1/1:0,3:2:9.03:118,9,0	0/0:5,0:5:15.04:0,15,161	1/1:1,14:15:27.05:336,27,0	1/1:0,9:9:27.09:355,27,0	0/0:6,0:6:18.05:0,18,193	0/0:6,0:6:18.05:0,18,193	0/0:10,0:10:23.09:0,23,231	0/0:6,0:6:18.05:0,18,193	0/0:7,0:7:18.05:0,18,193	0/0:8,0:8:24.06:0,24,257	1/1:0,2:2:6.02:79,6,0	0/0:6,0:6:17.25:0,17,89	0/0:6,0:5:17.50:0,17,101	0/0:4,0:4:11.61:0,12,64
chr10	3903735	.	T	TG	1298.05	PASS	AB=0.813;AC=12;AF=0.214;AN=56;BaseQRankSum=-3.284;DP=543;FS=0.532;HRun=10;HaplotypeScore=74.8044;InbreedingCoeff=0.5712;MQ=77.39;MQ0=0;MQRankSum=-1.441;QD=7.55;ReadPosRankSum=-1.631;VQSLOD=1.7530;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,10:18:18.04:192,18,0	0/0:7,0:8:17.01:0,17,129	0/0:20,0:18:9.14:0,9,133	0/1:20,0:21:35.49:35,0,81	0/1:23,2:25:5.03:5,0,170	0/0:12,0:12:26.95:0,27,221	0/0:22,0:23:49.95:0,50,399	1/1:7,10:18:23.64:270,24,0	0/0:19,0:19:25.93:0,26,199	0/0:9,0:10:20.01:0,20,153	0/0:20,0:20:38.78:0,39,310	0/0:28,0:28:49.94:0,50,399	0/0:18,0:18:35.88:0,36,290	0/0:24,0:24:44.86:0,45,366	1/1:8,20:28:17.46:391,17,0	0/0:29,0:30:73.86:0,74,585	1/1:6,16:22:8.44:295,8,0	0/1:9,10:19:46.86:165,0,47	0/0:9,0:11:16.05:0,16,110	0/0:18,0:18:41.94:0,42,345	0/0:24,0:24:20.06:0,20,317	0/0:26,0:27:67.81:0,68,527	0/0:12,0:12:23.96:0,24,197	0/0:11,0:11:29.95:0,30,246	0/1:12,8:20:9.61:113,0,10	0/0:28,0:30:52.90:0,53,418	0/0:16,0:17:35.60:0,36,278	0/0:9,0:9:20.96:0,21,172
chr10	3903970	.	AATGCATTCCAGCCGAC	A	3942.23	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.260;DP=744;FS=7.919;HRun=0;HaplotypeScore=324.6120;InbreedingCoeff=0.9988;MQ=84.73;MQ0=1;MQRankSum=-7.134;QD=74.38;ReadPosRankSum=-0.835;VQSLOD=2.0146;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,30:32:69.19:2878,69,0	0/0:9,0:9:27.09:0,27,1960	0/0:31,0:31:84.29:0,84,4850	0/0:23,0:23:63.19:0,63,3379	0/0:17,0:17:48.14:0,48,2709	0/0:18,0:18:51.17:0,51,3816	0/0:36,0:36:99:0,99,7178	1/1:10,11:21:33.08:1064,33,0	0/0:34,0:34:96.31:0,96,6960	0/0:18,0:18:54.19:0,54,3859	0/0:14,0:14:42.13:0,42,2771	0/0:44,0:44:99:0,129,9345	0/0:23,0:23:69.24:0,69,5245	0/0:31,0:31:90.21:0,90,6653	0/0:34,0:34:99:0,102,7432	0/0:33,0:33:99:0,99,7397	0/0:41,0:40:99:0,117,8872	0/0:30,0:30:90.31:0,90,5744	0/0:16,0:16:45.15:0,45,3019	0/0:29,0:29:87.30:0,87,6199	0/0:30,0:30:87.30:0,87,6126	0/0:21,0:21:63.22:0,63,3992	0/0:21,0:21:57.20:0,57,3871	0/0:43,0:43:99:0,123,8776	0/0:23,0:23:66.23:0,66,4255	0/0:26,0:26:75.26:0,75,4819	0/0:35,0:34:99:0,102,6763	0/0:11,0:11:27.04:0,27,1540
chr10	3904752	.	TACACACACAC	T	4591.86	PASS	AB=0.664;AC=14;AF=0.250;AN=56;BaseQRankSum=11.405;DP=682;FS=4.807;HRun=0;HaplotypeScore=206.9467;InbreedingCoeff=0.8132;MQ=61.00;MQ0=9;MQRankSum=-11.264;QD=28.88;ReadPosRankSum=-0.025;VQSLOD=3.8926;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,17:32:31.92:844,32,0	0/0:8,0:17:17.83:0,18,705	0/0:32,0:13:9.03:0,9,301	0/0:43,0:15:13.86:0,14,531	0/0:12,0:14:33.11:0,33,1520	0/0:28,0:32:60.21:0,60,2548	0/0:30,0:35:63.19:0,63,2548	0/0:13,0:18:25.62:0,26,332	0/0:18,0:18:39.03:0,39,1578	0/0:24,0:27:57.20:0,57,2278	0/0:11,0:13:33.11:0,33,1453	0/0:26,0:29:69.24:0,69,3233	0/0:26,0:26:66.23:0,66,3261	0/0:32,0:34:78.27:0,78,3662	0/1:9,12:23:3.24:941,0,3	0/0:30,0:32:84.29:0,84,3962	0/1:14,0:24:1.49:128,0,1	1/1:11,4:15:9.03:271,9,0	0/0:16,0:16:24.08:0,24,1101	0/0:25,0:26:63.22:0,63,2999	0/0:25,0:29:51.17:0,51,2237	0/0:24,0:24:57.20:0,57,2660	0/0:6,0:19:24.78:0,25,1206	0/0:16,0:39:69.23:0,69,2927	1/1:10,10:22:30.06:737,30,0	1/1:12,6:18:4.98:567,5,0	1/1:7,12:21:36.08:974,36,0	1/1:2,2:4:6.02:129,6,0
chr10	3908587	.	ACTCATTTC	A	3144.92	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=10.134;DP=717;FS=8.416;HRun=0;HaplotypeScore=173.8374;InbreedingCoeff=0.9615;MQ=84.49;MQ0=0;MQRankSum=-8.572;QD=66.91;ReadPosRankSum=1.876;VQSLOD=3.2275;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,138,6025	0/0:14,0:14:36.12:0,36,1591	0/0:22,0:22:66.22:0,66,2581	0/0:28,0:28:76.66:0,77,3250	0/0:22,0:22:66.21:0,66,2646	0/0:20,0:20:60.18:0,60,2427	0/0:30,0:30:87.30:0,87,3640	0/0:42,0:42:99:0,120,5072	0/0:27,0:27:78.27:0,78,3263	0/0:24,0:24:72.24:0,72,3066	0/0:19,0:19:57.20:0,57,2471	0/0:35,0:35:99:0,105,4537	0/0:27,0:27:78.27:0,78,3447	0/0:32,0:32:96.33:0,96,4221	0/0:28,0:28:84.26:0,84,3527	0/0:26,0:26:78.27:0,78,3452	0/0:27,0:27:81.26:0,81,3443	0/0:23,0:23:69.24:0,69,2903	0/0:23,0:23:69.24:0,69,2947	0/0:26,0:26:78.25:0,78,3330	0/0:34,0:34:99:0,99,4273	0/0:23,0:23:69.24:0,69,3036	0/0:19,0:19:57.20:0,57,2446	0/0:25,0:25:75.24:0,75,3096	0/0:23,0:23:66.23:0,66,2958	1/1:2,18:20:54.10:1437,54,0	1/1:0,22:22:57.20:1668,57,0	1/1:0,5:5:6.02:176,6,0
chr10	3911088	.	CT	C	738.40	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-1.985;DP=436;FS=7.798;HRun=14;HaplotypeScore=62.4115;InbreedingCoeff=0.7422;MQ=73.07;MQ0=1;MQRankSum=0.060;QD=9.00;ReadPosRankSum=0.386;VQSLOD=2.5297;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:32:63.68:0,64,372	0/0:8,0:11:26.53:0,27,207	0/0:25,0:17:14.45:0,14,138	0/0:19,0:12:17.34:0,17,119	0/0:9,1:11:3.02:0,3,147	0/0:23,2:25:11.14:0,11,380	0/0:9,0:9:11.96:0,12,99	1/1:10,16:27:23.74:290,24,0	0/0:11,0:11:22.65:0,23,175	0/0:15,1:17:9.25:0,9,264	0/0:17,1:19:15.09:0,15,251	0/0:12,0:13:20.70:0,21,156	0/0:11,0:11:20.62:0,21,173	0/0:13,0:14:13.97:0,14,221	1/1:7,8:15:11.62:78,12,0	0/0:10,0:11:20.17:0,20,212	0/0:5,0:11:12.87:0,13,69	1/1:7,13:20:37.33:265,37,0	0/0:16,0:18:26.32:0,26,207	0/0:15,0:14:26.37:0,26,222	0/0:9,0:9:21.29:0,21,173	0/0:11,1:13:2.80:0,3,183	0/0:10,0:10:17.97:0,18,158	0/0:10,0:10:13.73:0,14,115	1/1:2,18:20:15.91:258,16,0	0/0:2,0:10:5.31:0,5,14	0/0:6,0:20:8.64:0,9,55	0/0:2,0:8:0.10:0,0,31
chr10	3914382	.	CACGTAAGTGAG	C	4243.84	PASS	AB=0.541;AC=5;AF=0.089;AN=56;BaseQRankSum=10.439;DP=718;FS=3.792;HRun=0;HaplotypeScore=226.4992;InbreedingCoeff=0.6806;MQ=76.13;MQ0=0;MQRankSum=-9.796;QD=92.26;ReadPosRankSum=3.354;VQSLOD=4.8359;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:41:99:0,120,6151	0/0:8,0:8:24.08:0,24,1252	0/0:20,0:20:57.19:0,57,2618	0/0:18,0:19:13.89:0,14,1889	0/0:20,0:20:57.20:0,57,3221	0/0:21,0:21:60.15:0,60,2896	0/0:37,0:37:99:0,108,5595	0/0:24,0:24:69.23:0,69,3483	0/0:41,0:41:99:0,117,6044	0/0:31,0:31:90.31:0,90,4789	0/0:10,0:10:27.09:0,27,1557	0/0:40,0:40:99:0,117,6059	0/0:29,0:29:81.28:0,81,4442	0/0:28,0:28:78.27:0,78,3908	0/0:38,0:38:99:0,111,6123	0/0:31,0:31:87.30:0,87,4692	0/0:39,0:39:99:0,111,5860	0/0:21,0:21:60.21:0,60,3277	0/0:30,0:30:90.30:0,90,4155	0/0:19,0:19:51.18:0,51,2724	0/0:38,0:38:99:0,111,6015	0/0:17,0:17:51.17:0,51,2578	0/0:17,0:17:51.13:0,51,2643	0/0:35,0:35:99:0,99,5188	0/0:17,0:17:51.18:0,51,2501	0/1:3,17:20:99:1676,0,289	1/1:0,24:24:69.24:2461,69,0	1/1:0,2:2:3.01:107,3,0
chr10	3915095	.	AT	A	1767.95	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.885;DP=601;FS=8.260;HRun=4;HaplotypeScore=58.5273;InbreedingCoeff=0.9664;MQ=78.09;MQ0=0;MQRankSum=-0.209;QD=37.62;ReadPosRankSum=-4.315;VQSLOD=1.6094;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:93.32:0,93,1486	0/0:7,0:7:21.06:0,21,313	0/0:15,0:15:45.13:0,45,666	0/0:22,0:22:66.22:0,66,1018	0/0:19,0:19:57.18:0,57,887	0/0:22,0:22:63.21:0,63,1003	0/0:18,0:18:54.18:0,54,864	1/1:0,47:47:99:1863,135,0	0/0:18,0:18:51.16:0,51,789	0/0:14,0:14:39.13:0,39,622	0/0:19,0:19:57.14:0,57,827	0/0:25,0:25:75.24:0,75,1174	0/0:26,0:26:78.27:0,78,1244	0/0:13,0:13:39.12:0,39,600	0/0:23,0:23:69.20:0,69,1051	0/0:25,0:25:75.26:0,75,1192	0/0:24,0:24:71.91:0,72,1114	0/0:26,0:26:75.26:0,75,1187	0/0:20,0:20:60.19:0,60,916	0/0:19,0:19:57.19:0,57,896	0/0:21,0:21:63.20:0,63,979	0/0:17,0:17:51.17:0,51,811	0/0:24,0:24:63.21:0,63,994	0/0:18,0:18:54.18:0,54,863	0/0:31,0:31:93.31:0,93,1460	0/0:31,0:31:93.32:0,93,1483	0/0:22,0:22:66.23:0,66,1055	0/0:4,0:4:12.04:0,12,192
chr10	3916696	.	ATCT	A	854.51	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.168;DP=631;FS=0.000;HRun=0;HaplotypeScore=87.0613;InbreedingCoeff=0.9841;MQ=89.57;MQ0=0;MQRankSum=-2.115;QD=32.87;ReadPosRankSum=2.268;VQSLOD=3.9136;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,25:26:57.19:949,57,0	0/0:11,0:11:33.11:0,33,725	0/0:29,0:28:78.22:0,78,1637	0/0:21,0:21:50.35:0,50,1148	0/0:23,0:23:63.21:0,63,1387	0/0:15,0:15:45.15:0,45,1001	0/0:19,0:19:51.18:0,51,1137	0/0:39,0:39:99:0,105,2156	0/0:23,0:23:66.23:0,66,1496	0/0:26,0:26:75.26:0,75,1700	0/0:22,0:22:57.17:0,57,1207	0/0:16,0:16:48.16:0,48,1085	0/0:24,0:24:72.25:0,72,1601	0/0:24,0:24:72.25:0,72,1596	0/0:33,0:33:99:0,99,2203	0/0:25,0:25:69.24:0,69,1563	0/0:24,0:24:69.24:0,69,1562	0/0:13,0:13:39.13:0,39,884	0/0:18,0:18:54.19:0,54,1224	0/0:33,0:33:96.33:0,96,2161	0/0:18,0:18:51.18:0,51,1133	0/0:22,0:22:57.17:0,57,1204	0/0:19,0:18:45.14:0,45,977	0/0:21,0:21:51.18:0,51,1155	0/0:34,0:34:96.33:0,96,2175	0/0:30,0:30:84.29:0,84,1880	0/0:18,0:18:54.16:0,54,1136	0/0:5,0:5:15.05:0,15,340
chr10	3917076	.	GGAA	G	438.86	PASS	AB=1.000;AC=3;AF=0.056;AN=54;BaseQRankSum=2.304;DP=420;FS=11.174;HRun=0;HaplotypeScore=46.5774;InbreedingCoeff=0.6177;MQ=37.92;MQ0=68;MQRankSum=-2.783;QD=13.71;ReadPosRankSum=-0.786;VQSLOD=1.4934;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:14:23.03:0,23,190	0/0:6,0:4:11.92:0,12,134	0/0:40,0:1:0.47:0,0,1	./.	0/0:19,0:18:38.88:0,39,620	0/0:23,0:23:51.06:0,51,795	0/0:11,0:8:20.85:0,21,207	1/1:5,17:18:41.30:532,41,0	0/0:7,0:6:18.02:0,18,219	0/0:8,0:7:21.02:0,21,306	0/0:11,0:8:20.81:0,21,231	0/0:12,0:11:29.91:0,30,462	0/0:11,0:10:29.99:0,30,306	0/0:6,0:6:15.02:0,15,259	0/0:10,0:9:9.33:0,9,162	0/0:7,0:7:21.02:0,21,315	0/0:19,0:14:29.85:0,30,319	0/0:13,0:11:20.82:0,21,181	0/0:13,0:11:26.83:0,27,406	0/0:16,0:15:41.98:0,42,601	0/0:12,0:10:23.80:0,24,316	0/0:8,0:8:20.71:0,21,178	0/0:10,0:9:21.06:0,21,399	0/0:12,0:10:23.85:0,24,309	0/0:15,0:15:26.60:0,27,189	0/0:12,0:11:19.60:0,20,195	0/0:15,0:13:35.67:0,36,266	0/1:10,0:8:6.10:6,0,28
chr10	3918224	.	CAT	C	4062.83	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=11.185;DP=711;FS=1.326;HRun=0;HaplotypeScore=90.6148;InbreedingCoeff=0.9998;MQ=73.59;MQ0=0;MQRankSum=-1.425;QD=35.95;ReadPosRankSum=3.809;VQSLOD=6.1079;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,31:32:75.25:1104,75,0	0/0:10,0:10:30.09:0,30,531	0/0:24,0:24:58.39:0,58,1001	0/0:19,0:17:36.16:0,36,760	0/0:25,0:25:75.24:0,75,1350	0/0:30,0:30:90.31:0,90,1657	0/0:19,0:19:54.19:0,54,1000	0/0:39,0:39:99:0,117,2127	0/0:20,0:20:60.21:0,60,1122	0/0:25,0:25:75.26:0,75,1400	0/0:15,0:15:42.14:0,42,786	0/0:28,0:28:84.27:0,84,1525	0/0:26,0:26:72.25:0,72,1335	0/0:22,0:22:63.19:0,63,1138	1/1:2,29:31:81.27:1192,81,0	0/0:28,0:27:78.27:0,78,1451	0/0:26,0:26:75.26:0,75,1351	1/1:0,20:20:51.17:750,51,0	0/0:13,0:13:36.12:0,36,639	0/0:42,0:42:99:0,126,2289	0/0:35,0:35:99:0,102,1843	0/0:25,0:25:72.25:0,72,1348	0/0:20,0:20:56.94:0,57,1032	0/0:30,0:30:90.29:0,90,1637	1/1:1,29:30:69.23:1016,69,0	0/0:28,0:28:81.26:0,81,1474	0/0:34,0:34:96.25:0,96,1669	0/0:15,0:15:45.15:0,45,829
chr10	3919372	.	AGTAGGTAGGTAG	A	2453.35	PASS	AC=8;AF=0.154;AN=52;BaseQRankSum=1.559;DP=663;FS=23.176;HRun=0;HaplotypeScore=224.9231;InbreedingCoeff=0.9175;MQ=53.88;MQ0=21;MQRankSum=-2.981;QD=29.21;ReadPosRankSum=-1.657;VQSLOD=1.4295;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:38.90:0,39,535	0/0:14,0:13:21.06:0,21,686	./.	./.	0/0:16,0:16:24.08:0,24,849	0/0:35,0:35:72.17:0,72,2231	0/0:33,0:30:39.10:0,39,678	0/0:37,0:23:11.97:0,12,99	0/0:21,0:21:42.13:0,42,1295	0/0:34,0:31:60.15:0,60,2022	0/0:18,0:17:27.09:0,27,953	0/0:19,0:19:36.11:0,36,1234	0/0:37,0:37:84.25:0,84,2483	0/0:20,0:20:42.13:0,42,1341	0/0:48,0:48:65.32:0,65,1472	0/0:20,0:20:45.14:0,45,1149	1/1:7,14:21:3.01:104,3,0	0/0:8,0:7:8.50:0,9,196	0/0:16,0:12:27.03:0,27,839	0/0:25,0:25:39.12:0,39,1247	0/0:42,0:42:72.09:0,72,2152	0/0:22,0:22:42.12:0,42,1254	0/0:20,0:20:30.10:0,30,1015	0/0:23,0:23:39.12:0,39,1317	0/0:30,0:29:38.82:0,39,488	1/1:24,1:25:47.86:822,48,0	1/1:27,2:29:57.18:1219,57,0	1/1:8,1:9:18.06:457,18,0
chr10	3919433	.	GAGAT	G	2091.68	PASS	AB=0.939;AC=28;AF=0.560;AN=50;BaseQRankSum=3.661;DP=665;FS=0.621;HRun=0;HaplotypeScore=136.0115;InbreedingCoeff=0.4001;MQ=58.26;MQ0=10;MQRankSum=-0.322;QD=5.27;ReadPosRankSum=0.382;VQSLOD=2.6605;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:22,2:24:52.56:53,0,643	0/0:7,0:7:3.01:0,3,50	./.	./.	0/0:18,0:18:30.10:0,30,645	1/1:19,8:27:12.04:181,12,0	1/1:24,0:24:9.03:133,9,0	./.	0/1:23,1:24:15.05:15,0,536	0/0:22,0:30:45.15:0,45,780	0/0:16,0:22:17.09:0,17,265	0/1:24,0:24:21.09:21,0,419	0/1:22,0:26:18.96:19,0,109	0/1:20,3:24:60.26:60,0,430	1/1:23,0:30:12.02:117,12,0	1/1:21,7:28:9.03:136,9,0	1/1:15,0:17:6.01:56,6,0	1/1:8,0:9:3:28,3,0	0/0:14,0:14:12.04:0,12,221	0/0:15,0:15:15.05:0,15,346	0/0:23,0:22:18.04:0,18,347	1/1:10,11:22:30.09:433,30,0	0/1:16,2:18:27.11:27,0,328	0/0:20,0:22:24.08:0,24,422	1/1:16,0:28:24.50:225,24,0	1/1:23,3:29:33.09:427,33,0	1/1:22,9:32:15.04:209,15,0	1/1:7,3:10:9.03:136,9,0
chr10	3919984	.	TCA	T	2739.67	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=11.808;DP=696;FS=3.791;HRun=0;HaplotypeScore=87.5891;InbreedingCoeff=0.9940;MQ=88.50;MQ0=0;MQRankSum=-3.991;QD=40.29;ReadPosRankSum=2.537;VQSLOD=5.6946;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:78.22:0,78,1508	0/0:5,0:5:15.05:0,15,305	0/0:31,0:31:87.28:0,87,1657	0/0:22,0:22:63.22:0,63,1192	0/0:21,0:21:63.22:0,63,1275	0/0:26,0:26:78.27:0,78,1565	0/0:25,0:25:75.26:0,75,1510	0/0:23,0:23:66.22:0,66,1289	0/0:17,0:17:51.17:0,51,1013	0/0:23,0:23:69.24:0,69,1399	0/0:18,0:18:54.19:0,54,1097	0/0:28,0:28:84.29:0,84,1696	0/0:32,0:32:96.33:0,96,1933	0/0:22,0:22:66.23:0,66,1341	1/1:0,28:28:72.25:1171,72,0	0/0:24,0:24:72.25:0,72,1451	0/0:22,0:22:66.23:0,66,1300	1/1:0,12:12:26.75:440,27,0	0/0:22,0:22:66.23:0,66,1340	0/0:32,0:32:96.32:0,96,1883	0/0:35,0:35:99:0,105,2134	0/0:36,0:36:99:0,108,2182	0/0:28,0:28:84.27:0,84,1668	0/0:29,0:29:84.29:0,84,1695	1/1:0,28:28:78.27:1271,78,0	0/0:32,0:32:96.33:0,96,1932	0/0:34,0:34:99:0,102,2045	0/0:15,0:15:45.13:0,45,871
chr10	3920862	.	TCACACACACACACA	T	1069.96	PASS	AB=0.731;AC=5;AF=0.100;AN=50;BaseQRankSum=5.006;DP=574;FS=4.299;HRun=0;HaplotypeScore=190.4143;InbreedingCoeff=0.7261;MQ=62.93;MQ0=15;MQRankSum=-5.298;QD=16.98;ReadPosRankSum=1.563;VQSLOD=2.6975;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:24,1:37:54.73:170,0,55	0/0:7,0:8:18.06:0,18,1074	./.	0/0:26,0:18:11.25:0,11,187	0/0:23,0:23:39.13:0,39,2080	0/0:11,0:11:18.04:0,18,1034	0/0:24,0:28:45.15:0,45,2357	0/0:22,0:21:32.12:0,32,1383	0/0:15,0:18:33.11:0,33,1996	0/0:19,0:18:21.03:0,21,772	0/0:15,0:15:21.07:0,21,1064	0/0:18,0:18:29.98:0,30,1936	0/0:13,0:11:27.09:0,27,1696	0/0:17,0:17:36.12:0,36,2314	1/1:5,8:15:15.05:569,15,0	0/0:18,0:20:36.12:0,36,2107	0/0:18,0:26:17.98:0,18,621	1/1:5,4:10:11.74:451,12,0	0/0:16,0:16:21.07:0,21,1200	0/0:13,0:13:30.10:0,30,1392	0/0:40,0:61:57.18:0,57,3108	0/0:18,0:19:27.09:0,27,1586	0/0:19,0:19:24.08:0,24,1296	0/0:24,0:25:51.17:0,51,2643	./.	0/0:11,0:16:33.11:0,33,1145	0/0:14,0:18:29.89:0,30,1077	./.
chr10	3920910	.	AG	A	378.43	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.668;DP=553;FS=12.196;HRun=7;HaplotypeScore=73.4093;InbreedingCoeff=0.9812;MQ=72.11;MQ0=6;MQRankSum=1.234;QD=15.77;ReadPosRankSum=-2.606;VQSLOD=1.8886;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:44.62:0,45,521	0/0:12,0:12:33.10:0,33,402	0/0:29,0:26:75.69:0,76,902	0/0:20,0:15:44.97:0,45,533	0/0:12,0:12:27.09:0,27,339	0/0:18,0:18:51.16:0,51,641	0/0:23,0:23:57.18:0,57,716	1/1:7,17:23:48.06:473,48,0	0/0:16,0:16:45.13:0,45,553	0/0:19,0:19:54.15:0,54,645	0/0:15,0:15:30.10:0,30,377	0/0:18,0:18:54.10:0,54,643	0/0:16,0:16:45.13:0,45,554	0/0:18,0:18:39.10:0,39,466	0/0:31,0:31:81.25:0,81,1005	0/0:21,0:21:54.16:0,54,666	0/0:17,0:17:36.11:0,36,446	0/0:14,0:12:36.10:0,36,440	0/0:15,0:14:42.11:0,42,512	0/0:10,0:10:27.09:0,27,340	0/0:53,0:53:99:0,114,1427	0/0:17,0:17:42.12:0,42,516	0/0:25,0:25:57.17:0,57,705	0/0:16,0:16:45.14:0,45,563	0/0:23,0:23:38.52:0,39,437	0/0:20,0:19:54.17:0,54,673	0/0:17,0:17:45.10:0,45,547	0/0:6,0:5:15.05:0,15,187
chr10	3925836	.	A	AT	3904.22	PASS	AB=0.600;AC=13;AF=0.232;AN=56;BaseQRankSum=-11.011;DP=519;FS=6.949;HRun=9;HaplotypeScore=50.5156;InbreedingCoeff=0.9191;MQ=73.75;MQ0=0;MQRankSum=-1.580;QD=26.20;ReadPosRankSum=0.753;VQSLOD=4.2032;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,34:37:93.25:1027,93,0	0/0:11,0:11:29.99:0,30,260	0/0:8,0:8:14.97:0,15,127	0/0:14,0:14:23.78:0,24,191	0/0:22,0:23:59.01:0,59,501	0/0:15,0:14:38.96:0,39,334	0/0:21,0:21:47.97:0,48,416	0/0:26,1:27:56.98:0,57,495	0/0:9,0:10:29.03:0,29,240	0/0:22,1:23:23.93:0,24,436	0/0:12,0:12:29.98:0,30,260	0/0:14,0:14:35.98:0,36,312	0/0:15,0:15:41.96:0,42,360	0/0:15,0:15:38.99:0,39,339	1/1:1,14:14:42.11:465,42,0	0/0:16,0:16:41.96:0,42,360	0/0:19,0:19:50.96:0,51,436	1/1:4,19:24:56.99:611,57,0	0/0:14,0:14:35.99:0,36,313	0/0:28,0:28:71.93:0,72,621	0/0:17,2:19:11.75:0,12,321	0/0:17,0:17:47.99:0,48,416	0/0:16,0:16:47.99:0,48,417	0/0:33,0:33:83.96:0,84,729	1/1:3,25:28:60.16:664,60,0	0/1:7,14:21:3.98:416,0,4	1/1:2,14:16:42.10:456,42,0	1/1:0,8:8:24.06:265,24,0
chr10	3925943	.	GCGC	G	1573.05	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-0.642;DP=355;FS=2.151;HRun=0;HaplotypeScore=60.1909;InbreedingCoeff=0.9722;MQ=85.73;MQ0=0;MQRankSum=-2.956;QD=18.95;ReadPosRankSum=-1.050;VQSLOD=3.2651;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:10,3:14:32.93:303,33,0	0/0:11,0:11:26.62:0,27,244	0/0:10,0:10:13.43:0,13,173	0/0:25,0:24:54.38:0,54,568	0/0:8,0:8:13.97:0,14,145	0/0:10,0:10:23.98:0,24,327	0/0:9,0:9:16.47:0,16,172	1/1:15,0:15:41.96:367,42,0	0/0:13,0:13:32.74:0,33,388	0/0:13,0:13:29.96:0,30,332	0/0:7,0:7:17.98:0,18,210	0/0:10,0:10:20.79:0,21,248	0/0:14,0:14:32.92:0,33,425	0/0:13,0:13:33.26:0,33,460	1/1:11,4:15:39.80:396,40,0	0/0:13,0:13:39.05:0,39,605	0/0:8,0:9:23.87:0,24,367	1/1:1,20:23:18.03:249,18,0	0/0:16,0:16:41.71:0,42,325	0/0:9,0:9:26.62:0,27,290	0/0:10,0:10:14.86:0,15,117	0/0:6,0:6:16.94:0,17,141	0/0:8,0:8:20.57:0,21,186	0/0:11,0:11:21.03:0,21,271	1/1:13,2:16:44.92:433,45,0	0/0:10,0:10:23.84:0,24,221	0/0:24,0:24:59.50:0,59,864	0/0:12,0:12:32.94:0,33,414
chr10	3925944	.	CG	C	1329.90	PASS	AB=0.842;AC=11;AF=0.196;AN=56;BaseQRankSum=1.025;DP=350;FS=16.196;HRun=1;HaplotypeScore=48.7248;InbreedingCoeff=0.7425;MQ=86.04;MQ0=0;MQRankSum=-2.602;QD=13.85;ReadPosRankSum=-0.058;VQSLOD=1.1696;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:13:32.82:254,33,0	0/0:8,3:11:1.19:0,1,143	0/0:11,0:10:9.19:0,9,106	0/0:25,0:24:64.19:0,64,447	0/0:8,0:8:14.32:0,14,92	0/0:10,0:10:23.56:0,24,168	0/0:9,0:9:15.96:0,16,109	1/1:15,0:15:41.92:366,42,0	0/0:13,0:13:29.44:0,29,184	0/0:13,0:13:16.65:0,17,179	0/0:7,0:7:14.34:0,14,96	0/0:7,1:8:4.72:0,5,123	0/0:14,0:14:31.71:0,32,215	0/0:13,0:13:32.05:0,32,236	1/1:14,0:14:41.85:343,42,0	0/0:13,0:13:36.34:0,36,327	0/0:9,0:9:23.70:0,24,171	1/1:22,0:22:17.94:142,18,0	0/1:13,3:16:34.02:34,0,192	0/0:9,0:9:20.24:0,20,156	0/0:8,0:8:14.81:0,15,98	0/0:6,0:6:16.91:0,17,110	0/0:8,0:8:0.56:0,1,101	0/0:11,0:11:16.22:0,16,145	1/1:16,0:16:44.40:365,44,0	0/0:11,0:11:22.57:0,23,147	0/0:25,0:25:61.96:0,62,493	0/0:12,0:12:32.52:0,33,213
chr10	3926285	.	C	CGT	3703.27	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=10.672;DP=790;FS=1.270;HRun=0;HaplotypeScore=116.6812;InbreedingCoeff=0.9995;MQ=73.07;MQ0=0;MQRankSum=-2.264;QD=23.59;ReadPosRankSum=1.579;VQSLOD=4.5700;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:42.66:0,43,475	0/0:23,0:23:57.18:0,57,705	0/0:31,0:30:38.41:0,38,492	0/0:30,0:28:45.13:0,45,541	0/0:26,0:27:75.07:0,75,906	0/0:37,0:37:96.25:0,96,1150	0/0:34,0:34:73.42:0,73,867	0/0:38,0:39:53.21:0,53,438	0/0:25,0:25:63.18:0,63,766	0/0:24,0:24:51.15:0,51,621	0/0:19,0:22:53.93:0,54,621	0/0:29,0:29:66.21:0,66,818	0/0:24,0:24:66.18:0,66,792	0/0:27,0:28:57:0,57,670	1/1:7,20:27:41.45:882,41,0	0/0:21,0:22:57.01:0,57,683	0/0:20,0:22:53.97:0,54,629	1/1:5,15:20:42.14:680,42,0	0/0:28,0:29:50.94:0,51,561	0/0:17,0:18:44.97:0,45,535	0/0:53,0:53:99:0,123,1503	0/0:20,0:20:45.14:0,45,557	0/0:28,0:28:54:0,54,645	0/0:28,0:29:52.99:0,53,821	1/1:7,21:30:47.90:778,48,0	1/1:14,0:32:31.27:554,31,0	1/1:11,1:35:63.01:575,63,0	1/1:2,1:13:24.02:235,24,0
chr10	3926298	.	GTA	G	1233.23	PASS	AB=1.000;AC=6;AF=0.107;AN=56;BaseQRankSum=3.721;DP=757;FS=1.692;HRun=0;HaplotypeScore=119.1554;InbreedingCoeff=0.2861;MQ=66.13;MQ0=0;MQRankSum=0.911;QD=8.45;ReadPosRankSum=-5.231;VQSLOD=2.5091;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:39,0:39:73.67:74,0,634	0/0:21,0:21:60.19:0,60,1063	0/0:30,0:29:71.36:0,71,967	0/0:26,0:23:59.21:0,59,946	0/0:28,0:28:67.22:0,67,1328	0/0:36,0:36:99:0,105,1802	0/0:31,0:31:90.20:0,90,1435	1/1:6,35:41:99:1240,102,0	0/0:26,0:26:78.17:0,78,1235	0/0:23,0:23:66.19:0,66,1061	0/0:21,0:21:34.02:0,34,882	0/0:31,0:31:87.22:0,87,1396	0/0:26,0:26:75.20:0,75,1274	0/0:28,0:28:66.12:0,66,1156	0/1:24,0:24:19.06:19,0,41	0/0:22,0:22:53.13:0,53,1073	0/0:22,0:22:43.13:0,43,910	0/1:17,0:17:18.52:23,0,19	0/0:28,0:28:69.95:0,70,1073	0/0:19,0:19:44.09:0,44,874	0/0:46,0:46:99:0,135,2327	0/0:19,0:19:54.16:0,54,927	0/0:24,0:24:53.27:0,53,1042	0/0:28,0:28:62.08:0,62,1197	0/1:25,0:25:2.92:3,0,33	0/0:30,0:30:72.65:0,73,887	0/0:34,0:34:79.22:0,79,885	0/0:12,0:12:27.07:0,27,300
chr10	3930850	.	GCCTTACAAC	G	3750.36	PASS	AB=0.560;AC=5;AF=0.089;AN=56;BaseQRankSum=9.741;DP=666;FS=5.848;HRun=0;HaplotypeScore=179.6913;InbreedingCoeff=0.7454;MQ=82.83;MQ0=0;MQRankSum=-10.593;QD=76.54;ReadPosRankSum=2.313;VQSLOD=3.6049;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,132,6382	0/0:4,0:4:9.02:0,9,246	0/0:16,0:16:47.62:0,48,1893	0/0:28,0:28:78.23:0,78,3296	0/0:27,0:27:78.27:0,78,3493	0/0:17,0:17:51.18:0,51,2487	0/0:23,0:23:69.24:0,69,3212	0/0:40,0:40:99:0,114,5002	0/0:17,0:17:51.18:0,51,2304	0/0:34,0:34:99:0,99,4267	0/0:17,0:17:51.18:0,51,2423	0/0:22,0:22:63.22:0,63,2701	0/0:22,0:22:63.22:0,63,3058	0/0:34,0:34:99:0,99,4465	0/0:26,0:26:69.24:0,69,3383	0/0:23,0:23:69.24:0,69,3294	0/0:39,0:39:99:0,114,5268	0/0:21,0:21:60.21:0,60,2919	0/0:19,0:19:57.17:0,57,2312	0/0:29,0:29:81.28:0,81,3852	0/0:31,0:31:90.29:0,90,4202	0/0:16,0:16:48.16:0,48,2332	0/0:23,0:23:69.24:0,69,3262	0/0:25,0:25:75.26:0,75,3666	0/0:18,0:18:51.18:0,51,2455	0/1:3,11:14:99:986,0,111	1/1:1,29:30:78.27:2392,78,0	1/1:0,5:5:12.04:372,12,0
chr10	3930921	.	AT	A	3003.25	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.116;DP=719;FS=4.034;HRun=1;HaplotypeScore=73.2896;InbreedingCoeff=0.9969;MQ=89.08;MQ0=0;MQRankSum=-2.988;QD=36.62;ReadPosRankSum=3.504;VQSLOD=4.3045;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:56:99:0,166,2627	0/0:6,0:6:18.06:0,18,288	0/0:31,0:31:89.79:0,90,1316	0/0:25,0:25:55.53:0,56,1099	0/0:19,0:19:57.19:0,57,899	0/0:20,0:20:57.19:0,57,896	0/0:22,0:22:66.21:0,66,1028	0/0:31,0:31:93.30:0,93,1444	0/0:20,0:20:60.20:0,60,959	0/0:32,0:32:96.33:0,96,1532	0/0:13,0:13:39.12:0,39,597	0/0:31,0:31:93.30:0,93,1462	0/0:20,0:20:60.19:0,60,936	0/0:29,0:29:87.30:0,87,1390	1/1:0,38:38:99:1468,105,0	0/0:32,0:32:96.31:0,96,1508	0/0:31,0:31:93.29:0,93,1460	1/1:0,23:23:63.21:881,63,0	0/0:19,0:19:57.19:0,57,908	0/0:30,0:30:90.31:0,90,1438	0/0:33,0:33:99:0,99,1544	0/0:23,0:23:69.22:0,69,1076	0/0:19,0:19:57.19:0,57,905	0/0:22,0:22:66.22:0,66,1051	1/1:0,21:21:57.19:797,57,0	0/0:27,0:27:81.27:0,81,1273	0/0:35,0:35:84.47:0,84,1603	0/0:11,0:11:30.10:0,30,479
chr10	3933119	.	GTTCATTCA	G	851.41	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.417;DP=654;FS=0.000;HRun=0;HaplotypeScore=167.3794;InbreedingCoeff=0.9903;MQ=69.02;MQ0=0;MQRankSum=-4.079;QD=32.75;ReadPosRankSum=-3.547;VQSLOD=2.4061;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:90.31:0,90,3763	0/0:9,0:9:24.08:0,24,1011	0/0:17,0:14:20.50:0,21,565	0/0:13,0:13:27.09:0,27,933	0/0:22,0:22:60.21:0,60,2360	0/0:25,0:25:60.19:0,60,2246	0/0:33,0:33:75.25:0,75,2847	1/1:7,19:26:56.61:946,57,0	0/0:21,0:21:51.17:0,51,1755	0/0:23,0:23:51.18:0,51,1938	0/0:21,0:21:57.20:0,57,2152	0/0:30,0:30:66.23:0,66,2606	0/0:20,0:20:48.16:0,48,1861	0/0:27,0:27:72.23:0,72,2699	0/0:22,0:22:60.20:0,60,2300	0/0:22,0:22:54.18:0,54,2027	0/0:35,0:35:90.31:0,90,3417	0/0:25,0:25:66.21:0,66,2567	0/0:25,0:25:45.15:0,45,1445	0/0:29,0:29:75.26:0,75,3008	0/0:16,0:16:39.13:0,39,1627	0/0:28,0:28:75.26:0,75,3013	0/0:19,0:19:48.15:0,48,1665	0/0:24,0:24:69.22:0,69,2497	0/0:26,0:26:75.20:0,75,2688	0/0:35,0:35:75.25:0,75,2755	0/0:18,0:17:45.15:0,45,1864	0/0:8,0:8:24.08:0,24,932
chr10	3933927	.	A	AG	1541.84	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=4.577;DP=643;FS=12.966;HRun=7;HaplotypeScore=78.0509;InbreedingCoeff=0.9898;MQ=86.91;MQ0=0;MQRankSum=-2.657;QD=27.05;ReadPosRankSum=-1.833;VQSLOD=2.5670;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:69.10:0,69,660	0/0:8,0:8:24.03:0,24,227	0/0:23,0:23:30.03:0,30,395	0/0:24,0:24:43.44:0,43,526	0/0:25,0:25:66.08:0,66,627	0/0:20,0:20:57.07:0,57,544	0/0:26,0:26:66.06:0,66,622	1/1:4,17:21:45.14:540,45,0	0/0:20,0:20:54.07:0,54,517	0/0:20,0:20:45.06:0,45,435	0/0:15,0:15:45.07:0,45,434	0/0:28,0:28:72.06:0,72,682	0/0:30,0:30:81.12:0,81,778	0/0:23,0:23:63.10:0,63,608	0/0:25,0:25:63.10:0,63,608	0/0:23,0:23:60.08:0,60,579	1/1:3,33:36:93.29:1124,93,0	0/0:19,0:19:45.07:0,45,434	0/0:28,0:28:69.10:0,69,662	0/0:13,0:13:33.05:0,33,318	0/0:34,0:34:87.11:0,87,829	0/0:18,0:18:45.07:0,45,434	0/0:12,0:12:27.04:0,27,260	0/0:35,0:35:87.11:0,87,833	0/0:36,0:36:99:0,99,951	0/0:24,0:24:63.09:0,63,608	0/0:25,0:25:63.07:0,63,600	0/0:5,0:5:15.02:0,15,145
chr10	3935505	.	T	TG	709.68	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-4.111;DP=655;FS=3.799;HRun=8;HaplotypeScore=66.8865;InbreedingCoeff=0.9112;MQ=55.67;MQ0=21;MQRankSum=1.792;QD=13.92;ReadPosRankSum=1.542;VQSLOD=3.6201;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,24:32:45.13:519,45,0	0/0:17,0:15:38.94:0,39,347	0/0:15,0:3:9:0,9,82	0/0:18,0:5:5.17:0,5,73	0/0:22,0:22:48.03:0,48,439	0/0:18,0:18:36.01:0,36,329	0/0:41,0:40:98.86:0,99,874	0/0:21,0:18:47.99:0,48,428	0/0:17,0:17:42.02:0,42,384	0/0:23,0:21:57.02:0,57,521	0/0:15,0:15:32.99:0,33,297	0/0:21,0:21:51.01:0,51,467	0/0:19,0:19:36.01:0,36,329	0/0:18,0:18:41.86:0,42,384	0/0:28,0:28:69.03:0,69,632	0/0:26,0:26:60.02:0,60,546	1/1:7,11:16:27.08:312,27,0	0/0:21,0:21:44.46:0,44,406	0/0:17,0:15:33.01:0,33,302	0/0:17,0:17:48.03:0,48,438	0/0:35,0:33:81.04:0,81,741	0/0:21,0:21:45.02:0,45,411	0/0:28,0:28:56.64:0,57,508	0/0:28,0:28:66:0,66,597	0/0:35,0:35:86.98:0,87,786	0/0:39,0:39:93.02:0,93,844	0/0:27,0:27:78.03:0,78,710	0/0:8,0:7:21.01:0,21,192
chr10	3936581	.	TC	T	1750.14	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.151;DP=637;FS=1.745;HRun=4;HaplotypeScore=61.3090;InbreedingCoeff=0.9986;MQ=85.33;MQ0=0;MQRankSum=-3.407;QD=27.78;ReadPosRankSum=2.266;VQSLOD=3.3008;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,33:36:93.28:1116,93,0	0/0:10,0:10:30.10:0,30,418	0/0:18,0:18:51.15:0,51,679	0/0:23,0:23:45.20:0,45,719	0/0:24,0:24:69.23:0,69,963	0/0:16,0:16:45.12:0,45,594	0/0:35,0:35:99:0,99,1369	0/0:26,0:26:75.23:0,75,1030	0/0:26,0:26:78.26:0,78,1092	0/0:23,0:23:63.21:0,63,881	0/0:14,0:14:39.13:0,39,543	0/0:19,0:19:54.17:0,54,735	0/0:18,0:18:51.16:0,51,696	0/0:31,0:31:90.29:0,90,1245	0/0:25,0:25:72.24:0,72,1008	0/0:19,0:19:48.16:0,48,672	1/1:3,24:27:63.19:756,63,0	0/0:28,0:28:75.25:0,75,1036	0/0:21,0:21:60.17:0,60,803	0/0:16,0:16:45.14:0,45,614	0/0:34,0:34:93.29:0,93,1270	0/0:25,0:25:69.21:0,69,947	0/0:21,0:21:54.15:0,54,719	0/0:29,0:29:84.25:0,84,1137	0/0:17,0:17:51.15:0,51,681	0/0:29,0:29:87.28:0,87,1202	0/0:19,0:19:57.17:0,57,778	0/0:8,0:8:24.08:0,24,336
chr10	3936949	.	GT	G	447.74	PASS	AB=0.867;AC=15;AF=0.268;AN=56;BaseQRankSum=3.816;DP=576;FS=2.967;HRun=16;HaplotypeScore=75.6774;InbreedingCoeff=0.1992;MQ=71.51;MQ0=3;MQRankSum=1.866;QD=1.98;ReadPosRankSum=1.119;VQSLOD=-0.7612;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,5:49:19.36:0,19,574	0/1:6,1:7:0.03:0,0,108	0/1:24,0:15:0.59:1,0,52	0/0:20,0:12:7.35:0,7,35	0/0:29,1:32:17.64:0,18,332	0/0:12,2:16:7.13:0,7,180	0/0:16,1:17:14.57:0,15,197	1/1:14,11:25:5.87:140,6,0	0/1:19,1:21:28.51:29,0,209	0/0:23,1:26:17.61:0,18,232	0/1:15,5:20:29.31:29,0,150	0/0:16,0:16:8.94:0,9,175	0/0:13,0:14:23.70:0,24,176	0/1:18,1:18:2.17:2,0,82	0/1:15,4:20:24.29:24,0,237	0/0:17,1:19:17.49:0,17,221	0/1:23,3:30:9.02:9,0,314	0/0:10,1:13:4.84:0,5,153	0/0:22,1:23:8.88:0,9,170	0/0:15,1:18:3.18:0,3,112	0/0:15,1:16:9.38:0,9,175	0/0:14,1:17:29.71:0,30,223	0/0:14,0:15:23.96:0,24,197	0/0:38,0:38:83.69:0,84,664	0/1:8,2:13:6.55:7,0,134	1/1:9,14:23:37.18:218,37,0	0/1:8,12:21:3.10:87,0,3	1/1:0,3:3:8.83:54,9,0
chr10	3938886	.	TTG	T	388.92	PASS	AB=0.923;AC=12;AF=0.214;AN=56;BaseQRankSum=8.498;DP=704;FS=2.784;HRun=0;HaplotypeScore=91.0637;InbreedingCoeff=-0.1008;MQ=64.46;MQ0=4;MQRankSum=1.838;QD=1.33;ReadPosRankSum=1.717;VQSLOD=1.5187;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:23:5.69:0,6,47	0/0:7,0:7:8.99:0,9,82	0/0:19,0:14:6.02:0,6,81	0/0:22,0:13:5.97:0,6,63	0/0:26,0:26:44.29:0,44,676	0/0:17,0:17:27.09:0,27,415	0/0:30,3:33:17.28:0,17,614	0/0:26,0:26:26.36:0,26,256	0/1:26,1:28:28.42:28,0,538	0/0:25,0:25:48.13:0,48,684	0/1:22,0:22:21.14:21,0,117	0/0:26,1:27:16.89:0,17,628	0/0:21,1:22:10.92:0,11,541	0/0:36,1:37:32.01:0,32,885	0/1:29,5:36:92.80:93,0,748	0/1:14,2:16:32.13:32,0,424	1/1:12,0:29:42.61:210,43,0	0/1:19,2:21:17.20:17,0,607	0/1:24,1:23:13.12:13,0,256	0/0:15,0:15:10:0,10,370	0/0:49,4:53:25.48:0,25,775	0/1:29,3:32:42.41:42,0,676	0/1:19,1:20:32.13:32,0,423	0/1:31,4:35:36.72:37,0,735	0/1:25,2:27:17.55:18,0,580	0/0:24,0:24:26.69:0,27,234	0/0:21,0:20:11.71:0,12,125	0/0:14,0:14:11.92:0,12,116
chr10	3940786	.	GCACCTTACA	G	725.38	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.083;DP=523;FS=1.364;HRun=0;HaplotypeScore=138.5020;InbreedingCoeff=0.9975;MQ=81.96;MQ0=0;MQRankSum=-3.273;QD=48.36;ReadPosRankSum=-2.210;VQSLOD=3.0211;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:57.20:0,57,2681	0/0:14,0:14:42.14:0,42,1924	0/0:17,0:17:48.16:0,48,2157	0/0:14,0:14:41.97:0,42,1718	0/0:34,0:34:99:0,102,4759	0/0:17,0:17:42.14:0,42,1730	0/0:15,0:15:45.15:0,45,2158	1/1:5,10:15:30.10:820,30,0	0/0:22,0:22:60.21:0,60,2878	0/0:25,0:25:75.26:0,75,3634	0/0:13,0:13:39.13:0,39,1913	0/0:11,0:11:33.11:0,33,1550	0/0:20,0:20:60.21:0,60,2806	0/0:14,0:14:39.13:0,39,1881	0/0:15,0:15:45.15:0,45,2137	0/0:9,0:9:27.09:0,27,1293	0/0:27,0:27:81.28:0,81,3779	0/0:12,0:12:36.10:0,36,1501	0/0:18,0:18:51.18:0,51,2320	0/0:32,0:32:96.33:0,96,4605	0/0:17,0:17:51.18:0,51,2432	0/0:11,0:11:33.11:0,33,1619	0/0:15,0:15:39.11:0,39,1560	0/0:15,0:15:39.13:0,39,1883	0/0:21,0:21:60.21:0,60,2747	0/0:33,0:33:96.33:0,96,4545	0/0:27,0:27:75.26:0,75,3572	0/0:20,0:20:60.21:0,60,2798
chr10	3947004	.	TAA	T	527.13	PASS	AC=12;AF=0.222;AN=54;BaseQRankSum=3.304;DP=219;FS=6.022;HRun=13;HaplotypeScore=31.1611;InbreedingCoeff=0.7454;MQ=51.37;MQ0=26;MQRankSum=0.248;QD=11.46;ReadPosRankSum=0.898;VQSLOD=0.7508;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:6:11.83:0,12,134	0/0:1,0:1:3.01:0,3,43	0/0:9,0:5:12.02:0,12,135	0/0:6,0:3:8.51:0,9,82	0/0:11,0:11:26.58:0,27,356	0/0:10,0:11:29.54:0,30,357	0/0:3,0:4:11.48:0,11,110	0/0:13,0:13:27.05:0,27,363	0/0:5,0:3:6.02:0,6,87	0/0:9,0:6:15.05:0,15,217	0/0:9,0:10:18.02:0,18,237	0/0:1,0:1:3.01:0,3,43	0/0:5,0:5:15.04:0,15,202	0/0:3,0:3:5.46:0,5,29	1/1:2,2:2:3:29,3,0	0/0:3,0:3:9.03:0,9,130	0/0:9,1:21:17.31:0,17,151	1/1:5,2:5:8.94:77,9,0	0/0:8,0:8:18.06:0,18,251	0/0:15,0:17:44.63:0,45,597	0/0:6,0:6:17.02:0,17,174	./.	0/0:2,0:2:6.02:0,6,87	0/0:9,0:9:24.08:0,24,347	1/1:4,3:7:11.72:99,12,0	1/1:4,4:7:11.98:116,12,0	1/1:4,3:7:8.95:87,9,0	1/1:1,10:12:23.96:282,24,0
chr10	3947070	.	G	GA	399.42	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=-5.636;DP=276;FS=7.661;HRun=10;HaplotypeScore=42.5541;InbreedingCoeff=0.3382;MQ=60.32;MQ0=5;MQRankSum=0.188;QD=13.77;ReadPosRankSum=-3.042;VQSLOD=2.0733;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:29.95:0,30,246	0/0:3,0:3:5.99:0,6,49	0/0:5,0:4:5.99:0,6,49	0/0:9,0:4:4.49:0,4,28	0/0:14,0:15:34.98:0,35,276	0/1:8,0:8:27.06:27,0,55	0/0:6,0:7:17.02:0,17,129	1/1:6,15:21:26.46:477,26,0	0/0:3,0:3:8.99:0,9,74	0/0:11,0:12:32:0,32,252	0/0:5,0:5:14.98:0,15,123	0/0:7,0:8:20:0,20,151	0/0:7,0:7:19.53:0,20,152	0/0:5,0:5:11.97:0,12,98	0/0:7,0:7:8.98:0,9,74	0/0:5,0:4:5.99:0,6,49	0/0:30,0:31:64.74:0,65,512	0/0:20,1:21:9.95:0,10,288	0/0:13,0:11:32.96:0,33,270	0/0:13,0:13:32.93:0,33,267	0/0:4,0:4:8.99:0,9,74	0/0:1,0:1:3:0,3,25	0/0:3,0:3:5.99:0,6,49	0/0:6,0:6:11.77:0,12,98	0/0:17,0:17:35.94:0,36,296	0/0:16,0:16:47.75:0,48,382	0/0:8,0:8:20.97:0,21,172	0/0:11,0:11:32.96:0,33,271
chr10	3947097	.	TA	T	1398.89	PASS	AB=0.866;AC=10;AF=0.179;AN=56;BaseQRankSum=6.186;DP=316;FS=26.470;HRun=8;HaplotypeScore=44.6412;InbreedingCoeff=0.6290;MQ=61.34;MQ0=8;MQRankSum=-3.789;QD=17.27;ReadPosRankSum=0.735;VQSLOD=1.9723;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,16:16:38.97:376,39,0	0/0:3,0:3:6.02:0,6,72	0/1:11,3:7:25.24:25,0,36	0/0:13,0:5:2.95:0,3,21	0/0:10,0:10:27.07:0,27,316	0/0:10,0:10:27.03:0,27,300	0/0:8,0:8:21.06:0,21,252	0/0:20,0:20:51.16:0,51,613	0/0:8,0:8:24.06:0,24,279	0/0:14,0:13:33.10:0,33,390	0/0:7,0:7:21.05:0,21,242	0/1:9,1:10:1.89:2,0,263	0/0:7,0:7:15.05:0,15,181	0/0:8,0:8:21.06:0,21,253	0/0:9,0:9:15.05:0,15,180	0/0:5,0:4:12.04:0,12,145	0/0:30,0:30:84.20:0,84,976	0/0:27,0:27:57.16:0,57,679	0/0:19,0:15:36.11:0,36,435	0/0:11,0:11:27.06:0,27,306	0/0:2,0:2:6.02:0,6,72	0/0:1,0:1:3.01:0,3,36	0/0:2,0:2:6.02:0,6,71	0/0:2,0:2:3.01:0,3,36	0/0:17,0:17:45.13:0,45,534	1/1:1,19:20:57.09:551,57,0	1/1:1,8:9:27.04:260,27,0	1/1:2,10:12:36.06:346,36,0
chr10	3947115	.	T	TA	1448.69	PASS	AB=0.826;AC=17;AF=0.304;AN=56;BaseQRankSum=3.649;DP=337;FS=13.718;HRun=12;HaplotypeScore=54.8705;InbreedingCoeff=0.6873;MQ=68.81;MQ0=3;MQRankSum=-0.685;QD=8.05;ReadPosRankSum=0.056;VQSLOD=0.6599;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:21:28.98:149,29,0	0/0:3,0:3:8.95:0,9,66	0/1:18,1:11:7.71:8,0,63	0/1:18,0:9:4.34:11,0,4	0/0:12,0:12:29.77:0,30,215	0/0:13,0:13:32.81:0,33,240	0/0:4,0:4:10.99:0,11,72	1/1:13,6:19:6.43:203,6,0	0/0:7,0:8:13.94:0,14,93	0/0:10,0:10:20.86:0,21,153	0/0:8,0:8:20.88:0,21,153	0/0:10,0:13:22.89:0,23,159	0/0:8,0:8:14.89:0,15,109	0/0:8,0:8:17.87:0,18,131	0/1:3,10:13:0.73:154,0,1	0/0:5,0:4:14.91:0,15,108	0/0:23,0:26:50.68:0,51,337	1/1:5,19:25:40.95:407,41,0	0/0:13,1:15:8.65:0,9,217	0/0:8,0:10:15.93:0,16,98	0/0:5,0:5:8.93:0,9,66	0/0:2,0:2:5.97:0,6,44	0/0:3,0:3:5.96:0,6,44	0/0:4,0:4:11.93:0,12,87	1/1:7,10:18:14.09:180,14,0	1/1:7,1:19:40.34:240,40,0	1/1:6,2:15:0.97:112,1,0	1/1:1,2:11:28.74:172,29,0
chr10	3947926	.	CTG	C	1133.24	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.041;DP=745;FS=3.341;HRun=0;HaplotypeScore=84.5645;InbreedingCoeff=0.9978;MQ=100.54;MQ0=0;MQRankSum=-1.886;QD=36.56;ReadPosRankSum=-4.168;VQSLOD=4.5936;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,123,2198	0/0:9,0:9:24.08:0,24,440	0/0:44,0:44:99:0,126,2221	0/0:42,0:41:87.30:0,87,1824	0/0:21,0:21:63.22:0,63,1155	0/0:25,0:25:72.23:0,72,1281	0/0:18,0:18:54.19:0,54,976	1/1:1,30:31:87.28:1228,87,0	0/0:28,0:28:81.26:0,81,1447	0/0:26,0:26:75.25:0,75,1348	0/0:23,0:23:63.22:0,63,1134	0/0:31,0:31:93.29:0,93,1637	0/0:26,0:26:75.22:0,75,1313	0/0:28,0:28:81.26:0,81,1442	0/0:25,0:25:75.26:0,75,1353	0/0:26,0:26:75.26:0,75,1354	0/0:29,0:29:78.27:0,78,1430	0/0:18,0:18:51.13:0,51,882	0/0:15,0:15:42.14:0,42,753	0/0:15,0:15:39.13:0,39,707	0/0:46,0:46:99:0,123,2221	0/0:31,0:31:78.27:0,78,1397	0/0:24,0:24:69.22:0,69,1214	0/0:33,0:33:96.33:0,96,1737	0/0:20,0:20:57.20:0,57,1038	0/0:31,0:31:90.31:0,90,1638	0/0:24,0:24:72.25:0,72,1299	0/0:15,0:15:36.10:0,36,627
chr10	3949184	.	C	CA	281.75	PASS	AB=0.955;AC=4;AF=0.071;AN=56;BaseQRankSum=-1.864;DP=430;FS=5.196;HRun=10;HaplotypeScore=65.1457;InbreedingCoeff=0.4052;MQ=84.90;MQ0=1;MQRankSum=-0.013;QD=4.47;ReadPosRankSum=-3.114;VQSLOD=0.1777;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:41.93:0,42,341	0/0:7,0:7:14.93:0,15,116	0/0:44,0:25:26.78:0,27,217	0/1:36,0:19:13.65:14,0,50	0/0:24,0:24:56.60:0,57,432	0/0:24,1:25:34.92:0,35,439	0/0:9,0:9:17.82:0,18,128	1/1:3,13:17:41.79:370,42,0	0/0:15,0:16:32.40:0,32,238	0/0:15,0:15:29.58:0,30,221	0/0:17,0:17:38.85:0,39,305	0/1:9,1:10:7.60:8,0,125	0/0:11,0:11:14.94:0,15,123	0/0:11,0:11:29.68:0,30,224	0/0:15,0:15:29.13:0,29,219	0/0:8,0:9:23.01:0,23,178	0/0:21,0:21:48.86:0,49,335	0/0:15,0:15:35.05:0,35,259	0/0:7,0:7:13.95:0,14,93	0/0:12,0:13:8.03:0,8,163	0/0:2,0:2:5.99:0,6,48	0/0:8,0:8:17.95:0,18,145	0/0:15,0:15:10.08:0,10,232	0/0:5,0:5:14.84:0,15,111	0/0:19,0:19:24.84:0,25,341	0/0:9,0:9:22.72:0,23,150	0/0:18,0:18:37.37:0,37,254	0/0:14,0:15:43.94:0,44,345
chr10	3950361	.	CTGTG	C	217.57	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=1.653;DP=496;FS=0.000;HRun=0;HaplotypeScore=94.6652;InbreedingCoeff=0.5440;MQ=59.66;MQ0=22;MQRankSum=1.976;QD=8.37;ReadPosRankSum=-2.159;VQSLOD=2.1274;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:12:6.02:0,6,90	0/0:12,0:12:24.08:0,24,366	0/0:39,0:17:8.89:0,9,83	0/0:49,0:16:6.11:0,6,142	0/0:13,0:12:8.95:0,9,146	0/0:25,0:24:41.96:0,42,645	0/0:20,0:18:18.94:0,19,267	1/1:10,8:17:21.07:309,21,0	0/0:10,0:10:14.88:0,15,255	0/0:19,0:18:27.09:0,27,427	0/0:11,0:11:10.28:0,10,172	0/0:17,0:17:24.55:0,25,423	0/0:12,0:12:15.05:0,15,294	0/0:24,0:23:38.69:0,39,618	0/1:8,0:8:0:0,0,0	0/0:19,0:19:39.13:0,39,760	0/0:20,0:19:12.34:0,12,153	0/0:12,0:12:11.76:0,12,112	0/0:11,0:11:10.27:0,10,129	0/0:10,0:9:8.70:0,9,130	0/0:20,0:18:21.07:0,21,366	0/0:13,0:13:20.74:0,21,305	0/0:17,0:15:26.74:0,27,374	0/0:23,0:23:37.33:0,37,606	0/0:10,0:8:3.01:0,3,48	0/0:23,0:22:29.03:0,29,346	0/0:18,0:21:27.36:0,27,307	0/0:7,0:6:1.25:0,1,3
chr10	3950390	.	TGAGAGAGAGAGAGA	T	791.32	PASS	AB=0.804;AC=4;AF=0.077;AN=52;BaseQRankSum=4.266;DP=455;FS=15.628;HRun=0;HaplotypeScore=156.6729;InbreedingCoeff=0.1922;MQ=45.15;MQ0=28;MQRankSum=-5.100;QD=19.78;ReadPosRankSum=-0.473;VQSLOD=1.5885;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:10:3.01:0,3,184	0/0:12,0:12:18.04:0,18,461	./.	./.	0/0:14,0:13:12.51:0,13,511	0/0:28,0:26:42.14:0,42,2155	0/0:15,0:11:11.83:0,12,394	0/0:26,0:25:30.56:0,31,1087	0/0:10,0:10:21.07:0,21,1011	0/0:20,0:18:30.57:0,31,1122	0/0:7,0:8:12.04:0,12,501	0/0:19,0:18:27.09:0,27,1245	0/0:9,0:9:14.74:0,15,752	0/0:23,0:22:22.65:0,23,889	0/0:6,0:6:3.48:0,3,131	0/0:22,0:22:45.15:0,45,2467	0/0:15,0:14:14.91:0,15,301	0/0:6,0:6:11.53:0,12,334	0/0:13,0:13:20.55:0,21,616	0/0:14,0:13:18.53:0,19,916	0/0:23,0:20:17.56:0,18,710	0/0:24,0:24:35.45:0,35,1739	0/0:18,0:16:11.71:0,12,527	0/0:28,0:29:50.50:0,51,2776	0/0:9,0:6:5.81:0,6,210	0/1:11,4:15:33.67:499,0,34	0/1:17,1:19:99:319,0,124	1/1:3,0:2:3.01:75,3,0
chr10	3950417	.	G	GAGAGAGAGAA	125.21	PASS	AB=0.869;AC=3;AF=0.054;AN=56;BaseQRankSum=3.407;DP=518;FS=2.975;HRun=0;HaplotypeScore=163.9311;InbreedingCoeff=0.0115;MQ=50.25;MQ0=17;MQRankSum=-3.184;QD=2.72;ReadPosRankSum=-1.090;VQSLOD=2.7925;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:13:29.58:0,30,201	0/0:8,0:8:14.96:0,15,220	0/0:12,0:6:11.13:0,11,140	0/0:15,0:3:8.76:0,9,72	0/0:13,0:12:20.26:0,20,382	0/0:33,0:32:54.52:0,55,1122	0/0:17,0:13:22.24:0,22,269	0/0:34,0:33:58.28:0,58,398	0/0:14,0:14:33.50:0,33,593	0/0:24,0:22:44.57:0,45,610	0/0:13,0:13:29.99:0,30,408	0/0:22,0:21:45:0,45,606	0/0:17,0:17:37.70:0,38,488	0/0:18,0:17:29.05:0,29,288	0/1:18,0:18:4.20:4,0,105	0/0:23,0:23:60.08:0,60,1095	0/1:6,10:17:8.25:143,0,8	0/1:11,0:11:70.44:70,0,91	0/0:11,0:11:15.90:0,16,272	0/0:20,0:20:44.90:0,45,624	0/0:26,0:23:36.38:0,36,329	0/0:32,0:32:68.95:0,69,1152	0/0:19,0:17:31.87:0,32,315	0/0:27,0:27:60.10:0,60,1317	0/0:13,0:11:1.67:0,2,143	0/0:16,0:16:46.10:0,46,585	0/0:22,0:21:40.68:0,41,486	0/0:9,0:8:23.91:0,24,233
chr10	3950942	.	TACACACACACACACACAC	T	828.69	PASS	AC=4;AF=0.080;AN=50;BaseQRankSum=4.281;DP=486;FS=0.000;HRun=0;HaplotypeScore=189.0028;InbreedingCoeff=0.6222;MQ=67.87;MQ0=14;MQRankSum=-4.334;QD=16.25;ReadPosRankSum=2.039;VQSLOD=2.5834;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:14,19:31:18.06:647,18,0	0/0:1,0:5:9.03:0,9,334	0/0:37,0:22:6.02:0,6,109	./.	0/0:9,0:8:9.03:0,9,632	0/0:14,0:14:24.08:0,24,1436	0/0:17,0:17:24.97:0,25,1249	0/0:17,0:15:19.31:0,19,382	0/0:17,0:17:27.09:0,27,1548	0/0:10,0:10:12.01:0,12,608	0/0:13,0:13:12.04:0,12,875	0/0:12,0:12:12.04:0,12,859	0/0:18,0:18:15.05:0,15,1055	0/0:21,0:21:31.23:0,31,1715	0/0:11,0:13:23.05:0,23,1718	0/0:15,0:18:24.08:0,24,1652	0/0:27,0:27:26.93:0,27,778	0/0:12,0:18:16.87:0,17,637	0/0:20,0:20:20.59:0,21,1118	0/0:10,0:12:14.76:0,15,1100	0/0:19,0:19:21.07:0,21,1112	0/0:8,0:7:3.90:0,4,255	0/0:7,0:8:2.56:0,3,195	0/0:38,0:39:60.21:0,60,3891	0/0:6,0:7:9.03:0,9,647	./.	1/1:7,11:18:4.53:287,5,0	./.
chr10	3953252	.	CTG	C	3170.24	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=10.161;DP=775;FS=2.043;HRun=0;HaplotypeScore=97.7511;InbreedingCoeff=0.9985;MQ=88.59;MQ0=1;MQRankSum=-2.232;QD=39.14;ReadPosRankSum=2.404;VQSLOD=5.8514;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:99:0,99,1911	0/0:14,0:14:42.14:0,42,811	0/0:32,0:32:84.10:0,84,1413	0/0:25,0:25:75.20:0,75,1298	0/0:34,0:34:99:0,99,1800	0/0:19,0:19:54.17:0,54,966	0/0:25,0:25:75.24:0,75,1408	0/0:28,0:28:72.24:0,72,1344	0/0:26,0:26:78.25:0,78,1465	0/0:34,0:34:99:0,99,1740	0/0:32,0:32:96.31:0,96,1776	0/0:34,0:34:99:0,99,1883	0/0:40,0:40:99:0,117,2243	0/0:32,0:32:96.33:0,96,1819	0/0:39,0:39:99:0,117,2217	0/0:29,0:29:87.28:0,87,1623	0/0:17,0:17:51.17:0,51,959	0/0:17,0:17:48.13:0,48,890	0/0:17,0:17:51.17:0,51,954	0/0:25,0:25:75.26:0,75,1420	0/0:35,0:34:99:0,102,1900	0/0:26,0:26:72.23:0,72,1333	0/0:28,0:28:84.29:0,84,1612	0/0:26,0:26:75.26:0,75,1426	0/0:27,0:27:81.26:0,81,1513	1/1:2,34:36:47.31:1430,47,0	1/1:0,38:38:99:1561,102,0	1/1:0,7:7:21.07:322,21,0
chr10	3954548	.	AT	A	2991.97	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=10.881;DP=685;FS=2.438;HRun=4;HaplotypeScore=64.8617;InbreedingCoeff=0.9998;MQ=78.23;MQ0=0;MQRankSum=-2.181;QD=32.17;ReadPosRankSum=1.543;VQSLOD=4.3542;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,36:37:99:1224,102,0	0/0:15,0:15:42.14:0,42,588	0/0:16,0:16:42.14:0,42,573	0/0:16,0:16:30.27:0,30,384	0/0:21,0:21:63.21:0,63,881	0/0:29,0:29:84.28:0,84,1176	0/0:26,0:26:75.25:0,75,1049	0/0:30,0:30:78.23:0,78,1059	0/0:32,0:32:93.31:0,93,1301	0/0:27,0:27:81.26:0,81,1106	0/0:16,0:16:45.14:0,45,613	0/0:33,0:33:93.30:0,93,1275	0/0:20,0:20:57.19:0,57,798	0/0:25,0:25:75.22:0,75,1001	0/0:24,0:24:69.23:0,69,966	0/0:19,0:19:54.15:0,54,735	0/0:30,0:30:81.27:0,81,1134	0/0:19,0:19:57.10:0,57,737	0/0:28,0:28:75.24:0,75,1021	0/0:26,0:26:75.22:0,75,1008	0/0:53,0:53:99:0,153,2090	0/0:27,0:27:75.24:0,75,1033	0/0:19,0:19:54.14:0,54,718	0/0:21,0:21:60.20:0,60,840	0/0:20,0:20:60.19:0,60,826	1/1:1,20:21:57.14:669,57,0	1/1:0,20:20:60.18:720,60,0	1/1:0,15:15:45.14:540,45,0
chr10	3955364	.	CAG	C	1046.09	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=15.331;DP=808;FS=1.795;HRun=0;HaplotypeScore=115.8326;InbreedingCoeff=0.7744;MQ=56.90;MQ0=22;MQRankSum=-5.912;QD=10.46;ReadPosRankSum=1.312;VQSLOD=3.6882;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:5.70:0,6,370	0/0:15,0:15:45.14:0,45,765	0/0:20,0:14:16.59:0,17,251	0/0:28,0:10:24.06:0,24,332	0/0:28,0:28:76.61:0,77,1273	0/0:27,0:27:71.07:0,71,1090	0/0:33,0:33:96.28:0,96,1486	0/0:35,0:28:11.27:0,11,556	0/0:27,0:27:60.17:0,60,1189	0/0:33,0:32:93.26:0,93,1456	0/0:14,0:13:31.49:0,31,519	0/0:28,0:28:66.22:0,66,1296	0/0:27,0:27:78.24:0,78,1318	0/0:17,0:17:48.16:0,48,859	0/0:50,0:50:99:0,141,2294	0/0:18,0:18:51.17:0,51,867	0/1:37,0:37:26.11:26,0,361	0/0:26,0:26:55.66:0,56,867	0/0:24,0:21:53.90:0,54,856	0/0:26,0:26:70.58:0,71,1176	0/0:47,0:47:99:0,135,2227	0/0:35,0:35:99:0,102,1708	0/0:25,0:25:58.55:0,59,1005	0/0:57,0:57:99:0,156,2553	0/0:23,0:23:63.17:0,63,1031	1/1:12,14:27:44.27:607,44,0	1/1:8,20:27:43.16:461,43,0	1/1:2,5:7:9.10:96,9,0
chr10	3955366	.	GAGAC	G	2930.86	PASS	AB=0.956;AC=15;AF=0.268;AN=56;BaseQRankSum=12.539;DP=809;FS=5.554;HRun=0;HaplotypeScore=137.1894;InbreedingCoeff=0.6234;MQ=56.83;MQ0=22;MQRankSum=-4.979;QD=12.11;ReadPosRankSum=-0.036;VQSLOD=2.5232;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,32:42:36.12:585,36,0	0/0:15,0:15:33.11:0,33,710	0/0:20,0:13:1.60:0,2,130	0/0:28,0:8:6.02:0,6,80	0/0:27,2:29:11.41:0,11,1119	0/0:27,0:27:28.21:0,28,1012	0/0:35,0:35:54.17:0,54,1065	1/1:21,14:28:41.41:629,41,0	0/0:26,0:26:8.40:0,8,1174	0/0:35,0:34:72.25:0,72,1545	0/1:14,0:13:36.75:37,0,206	0/0:27,0:27:14.40:0,14,1229	0/0:27,0:27:63.22:0,63,1400	0/0:17,0:17:45.15:0,45,1013	0/0:50,0:50:99:0,99,2076	0/0:17,0:17:30.10:0,30,691	1/1:13,24:37:6.08:467,6,0	0/1:22,4:26:98.41:98,0,715	0/1:25,0:22:13.57:14,0,586	0/0:26,1:27:11.41:0,11,1152	0/0:47,0:47:96.30:0,96,2032	0/0:36,0:36:78.24:0,78,1583	0/0:24,1:25:11.39:0,11,1072	0/0:57,0:57:99:0,123,2460	0/0:22,0:22:54.16:0,54,1206	1/1:26,0:28:48.07:551,48,0	1/1:27,0:26:51.10:612,51,0	1/1:7,0:7:9.03:122,9,0
chr10	3955372	.	GAC	G	1233.33	PASS	AB=1.000;AC=8;AF=0.143;AN=56;BaseQRankSum=15.469;DP=810;FS=0.000;HRun=0;HaplotypeScore=112.2800;InbreedingCoeff=0.7408;MQ=55.68;MQ0=25;MQRankSum=-4.651;QD=8.87;ReadPosRankSum=2.847;VQSLOD=2.9628;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:41,0:41:21.30:21,0,283	0/0:15,0:15:45.15:0,45,823	0/0:19,0:12:24.53:0,25,376	0/0:32,0:8:24.08:0,24,369	0/0:28,0:28:74.46:0,74,1354	0/0:28,0:28:77.18:0,77,1322	0/0:39,0:39:99:0,99,1708	0/0:38,0:30:15.28:0,15,504	0/0:26,0:26:54.35:0,54,1237	0/0:36,0:35:99:0,105,1858	0/0:16,0:15:35.34:0,35,581	0/0:30,0:30:69.36:0,69,1508	0/0:25,0:25:75.26:0,75,1383	0/0:17,0:17:51.17:0,51,946	0/0:46,0:46:99:0,129,2299	0/0:19,0:19:57.17:0,57,957	0/1:37,0:37:1.88:2,0,380	0/0:25,0:25:48.74:0,49,940	0/0:22,0:19:46.03:0,46,820	0/0:27,0:27:71.46:0,71,1365	0/0:48,0:48:99:0,135,2402	0/0:35,0:35:99:0,99,1779	0/0:25,0:25:62.44:0,62,1237	0/0:54,0:54:99:0,157,2841	0/0:21,0:21:57.20:0,57,1085	1/1:10,16:25:47.37:621,47,0	1/1:8,21:28:55.78:624,56,0	1/1:0,6:6:11.83:111,12,0
chr10	3956697	.	CT	C	1950.93	PASS	AB=0.845;AC=14;AF=0.250;AN=56;BaseQRankSum=8.644;DP=693;FS=6.595;HRun=12;HaplotypeScore=73.2192;InbreedingCoeff=0.5771;MQ=70.22;MQ0=0;MQRankSum=-1.200;QD=10.32;ReadPosRankSum=1.640;VQSLOD=3.0677;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,26:31:80.62:620,81,0	0/0:13,0:13:32.94:0,33,320	0/0:21,1:16:6.78:0,7,215	0/0:15,1:15:7.63:0,8,147	0/0:30,1:31:6.25:0,6,574	0/0:17,0:17:39.03:0,39,378	0/0:36,1:41:44.46:0,44,748	1/1:7,22:29:56.50:417,56,0	0/0:28,2:31:42.83:0,43,582	0/0:29,1:30:33.85:0,34,509	0/1:11,2:14:6.20:6,0,231	0/0:33,0:33:74.08:0,74,677	0/0:18,2:20:15.67:0,16,322	0/0:30,1:31:60.40:0,60,752	0/0:27,0:27:66.08:0,66,643	0/0:19,2:22:6.81:0,7,460	0/0:27,3:31:20.10:0,20,682	0/0:26,4:29:19.60:0,20,543	0/1:12,3:15:36.58:37,0,211	0/0:25,0:25:56.76:0,57,544	0/0:38,0:38:93.12:0,93,919	0/1:17,4:21:24.63:25,0,313	0/0:23,0:23:57.11:0,57,572	0/0:20,1:22:27.03:0,27,415	0/1:16,4:20:50.90:51,0,245	1/1:8,17:27:24.41:348,24,0	1/1:3,19:23:61.79:468,62,0	1/1:1,7:8:20.91:162,21,0
chr10	3956837	.	CGCCACAGAGCCACAGA	C	1250.08	PASS	AB=0.619;AC=5;AF=0.093;AN=54;BaseQRankSum=6.305;DP=630;FS=1.433;HRun=0;HaplotypeScore=259.4117;InbreedingCoeff=0.6521;MQ=57.95;MQ0=2;MQRankSum=-2.395;QD=18.94;ReadPosRankSum=-0.206;VQSLOD=2.4184;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:26:48.12:780,48,0	0/0:7,0:7:15.04:0,15,416	0/0:12,0:7:6.02:0,6,237	0/0:25,0:19:20.50:0,21,927	0/0:8,0:8:15.04:0,15,391	0/0:15,0:14:30.10:0,30,795	0/0:52,0:52:99:0,120,3905	0/0:22,0:22:41.19:0,41,547	0/0:20,0:20:42.13:0,42,1570	0/0:17,0:17:42.12:0,42,1279	0/0:13,0:13:29.81:0,30,882	0/0:30,0:30:77.12:0,77,2718	0/0:14,0:14:26.94:0,27,711	0/0:34,0:34:81.19:0,81,2712	0/0:21,0:21:57.09:0,57,1975	0/0:11,0:11:27.09:0,27,1008	0/0:38,0:38:89.05:0,89,3519	0/0:31,0:31:75.18:0,75,2498	0/0:18,0:17:34.78:0,35,1001	0/0:7,0:7:18.05:0,18,542	0/0:67,0:66:99:0,153,5456	0/0:11,0:10:27.09:0,27,850	0/0:13,0:13:21:0,21,668	0/0:61,0:61:99:0,152,6587	0/0:16,0:16:33.11:0,33,1074	0/1:10,16:23:15.46:487,0,15	1/1:2,10:12:3.48:101,3,0	./.
chr10	3956981	.	CGCCACAGA	C	2050.59	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=8.643;DP=733;FS=2.125;HRun=0;HaplotypeScore=160.1140;InbreedingCoeff=0.7562;MQ=49.57;MQ0=44;MQRankSum=-9.331;QD=19.91;ReadPosRankSum=2.449;VQSLOD=3.3103;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:27:20.97:0,21,397	0/0:5,0:5:12.04:0,12,374	0/0:21,0:4:11.89:0,12,137	0/0:35,0:7:20.20:0,20,125	0/0:9,0:7:21.02:0,21,425	0/0:24,0:24:63.35:0,63,1977	0/0:49,0:47:99:0,132,4021	0/0:40,0:25:57.20:0,57,1351	0/0:22,0:22:66.23:0,66,2249	0/0:28,0:21:60.17:0,60,1738	0/0:5,0:4:9.02:0,9,174	1/1:3,32:35:38.94:848,39,0	1/1:4,15:19:27.08:615,27,0	1/1:3,36:39:26.51:728,27,0	0/0:18,0:17:7.79:0,8,502	0/0:14,0:14:42.14:0,42,1527	0/0:36,0:36:60.19:0,60,1501	0/0:23,0:22:24.37:0,24,457	0/0:31,0:12:27.08:0,27,682	0/0:4,0:2:6.02:0,6,220	0/0:104,0:97:99:0,265,8329	0/0:5,0:2:6.02:0,6,110	0/0:7,0:6:12.03:0,12,293	0/0:61,0:61:99:0,181,6421	0/0:13,0:10:15.30:0,15,394	0/0:27,0:17:27.66:0,28,498	0/1:10,0:9:1.84:2,0,295	0/0:15,0:13:9.68:0,10,312
chr10	3956998	.	ACCACAGAG	A	2076.38	PASS	AB=0.861;AC=18;AF=0.321;AN=56;BaseQRankSum=9.845;DP=754;FS=0.517;HRun=0;HaplotypeScore=179.1549;InbreedingCoeff=0.3521;MQ=52.57;MQ0=31;MQRankSum=-6.879;QD=7.39;ReadPosRankSum=2.732;VQSLOD=2.7114;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:9,21:26:0.95:32,1,0	0/0:3,0:3:3.01:0,3,127	0/0:27,0:10:6.59:0,7,546	0/0:43,0:22:26.37:0,26,1666	0/0:12,0:10:24.08:0,24,808	0/0:25,0:25:66.15:0,66,2274	0/0:47,0:46:99:0,105,3697	1/1:13,12:15:21.94:286,22,0	0/0:30,0:30:81.19:0,81,3051	0/0:28,0:21:54.16:0,54,1744	0/0:6,0:5:15.04:0,15,446	0/1:37,0:37:28.36:28,0,624	0/1:21,0:21:53.55:54,0,299	0/1:40,0:40:20.84:21,0,276	1/1:6,13:18:8.71:234,9,0	0/0:16,0:16:42.11:0,42,1456	0/1:25,4:29:99:301,0,209	1/1:4,19:23:18.06:428,18,0	0/0:28,0:14:35.99:0,36,820	0/0:6,0:4:9.92:0,10,296	0/0:115,0:110:99:0,286,9875	0/0:6,0:4:9.03:0,9,333	0/0:12,0:11:27.09:0,27,933	0/0:69,0:69:99:0,187,6887	1/1:4,9:11:2.93:77,3,0	0/1:11,13:19:99:487,0,172	0/1:3,4:6:12.97:148,0,13	1/1:8,5:12:5.69:157,6,0
chr10	3957029	.	CATCACAGA	C	252.41	PASS	AB=0.900;AC=4;AF=0.071;AN=56;BaseQRankSum=6.888;DP=801;FS=9.648;HRun=0;HaplotypeScore=224.5850;InbreedingCoeff=-0.0797;MQ=63.85;MQ0=6;MQRankSum=-4.861;QD=4.35;ReadPosRankSum=-0.872;VQSLOD=1.4370;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:27:35.99:0,36,678	0/0:4,0:4:12.04:0,12,376	0/0:47,0:36:49.53:0,50,1871	0/0:66,0:54:99:0,102,3121	0/0:18,0:18:51.17:0,51,1771	0/0:28,0:28:72.20:0,72,2269	0/0:47,0:47:99:0,141,4783	0/0:15,0:14:36.11:0,36,843	0/0:33,0:33:96.31:0,96,3497	0/0:21,0:21:60.19:0,60,1883	0/0:8,0:8:21.07:0,21,736	0/0:38,0:38:77.80:0,78,2463	0/0:20,0:20:40.85:0,41,1437	0/0:41,0:41:57.19:0,57,2073	0/0:17,0:17:25.92:0,26,712	0/0:16,0:16:48.10:0,48,1570	0/1:8,16:24:99:261,0,105	0/0:30,0:29:57.14:0,57,1679	0/0:18,0:16:48.12:0,48,1096	0/0:5,0:5:15.05:0,15,512	0/0:125,0:124:99:0,359,13099	0/0:13,0:13:36.12:0,36,1431	0/0:9,0:8:24.08:0,24,710	0/0:80,0:80:99:0,235,8433	0/0:12,0:11:14.77:0,15,489	0/1:25,0:25:27.66:28,0,822	0/1:5,0:4:32.75:33,0,70	0/1:4,0:4:40.58:41,0,63
chr10	3957157	.	AGCTACAGC	A	59.92	PASS	AB=1.000;AC=4;AF=0.071;AN=56;BaseQRankSum=3.893;DP=634;FS=9.620;HRun=0;HaplotypeScore=160.4026;InbreedingCoeff=0.2584;MQ=56.25;MQ0=4;MQRankSum=-0.301;QD=1.62;ReadPosRankSum=-5.406;VQSLOD=-0.0586;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:20:54.09:54,0,202	0/0:12,0:12:33.58:0,34,1017	0/0:21,0:14:30.03:0,30,690	0/0:25,0:16:41.78:0,42,841	0/0:10,0:9:24.07:0,24,658	0/0:14,0:14:36.07:0,36,813	0/0:49,0:49:99:0,115,4724	0/0:18,0:15:7.33:0,7,258	0/0:27,0:27:75.22:0,75,2227	0/0:14,0:14:42.13:0,42,1148	0/0:11,0:11:24:0,24,726	0/0:35,0:35:99:0,102,2959	0/0:13,0:13:39.12:0,39,1274	0/0:35,0:35:90.28:0,90,2809	0/0:17,0:17:41.43:0,41,1423	0/0:14,0:14:42.14:0,42,1674	0/0:42,0:42:99:0,117,3362	0/0:33,0:32:93.23:0,93,2788	0/0:16,0:15:42.13:0,42,939	0/0:4,0:4:12:0,12,242	0/0:83,0:82:99:0,224,6623	0/0:6,0:5:15.05:0,15,482	0/0:11,0:11:22.24:0,22,450	0/0:57,1:58:99:0,155,5045	0/0:17,0:16:4.65:0,5,1004	0/1:11,0:10:37.55:38,0,219	0/0:12,0:12:12.33:0,12,580	1/1:0,3:3:3.01:71,3,0
chr10	3957213	.	AGCCACAGC	A	268.08	PASS	AB=0.952;AC=8;AF=0.143;AN=56;BaseQRankSum=6.012;DP=648;FS=1.945;HRun=0;HaplotypeScore=133.2872;InbreedingCoeff=-0.0092;MQ=49.65;MQ0=46;MQRankSum=-3.222;QD=2.39;ReadPosRankSum=-3.496;VQSLOD=1.6449;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:35,0:21:3.39:3,0,151	0/1:8,0:8:14.06:14,0,83	0/0:24,0:2:2.99:0,3,23	0/0:30,0:8:14.54:0,15,134	0/0:5,0:4:12.02:0,12,177	0/1:15,0:13:4.07:4,0,608	0/0:57,0:55:99:0,143,3896	0/1:9,6:11:88:210,0,88	0/0:29,0:28:78.25:0,78,2354	0/0:15,0:14:2.99:0,3,379	0/0:8,0:8:11.99:0,12,196	0/0:36,0:35:91.40:0,91,2401	0/0:15,0:15:44.90:0,45,1151	0/0:34,0:33:90.04:0,90,2359	0/0:10,0:10:23.85:0,24,664	0/0:14,0:14:42.10:0,42,1159	0/0:28,0:27:37.39:0,37,1471	0/0:27,0:26:65.91:0,66,2106	0/0:19,0:8:11.90:0,12,249	0/0:7,0:6:7.09:0,7,171	0/0:89,0:82:99:0,176,3705	0/0:13,0:10:5.57:0,6,308	0/0:10,0:10:14.62:0,15,178	0/0:46,0:44:99:0,99,3013	0/0:20,0:16:23.03:0,23,454	0/1:22,0:14:82.90:83,0,229	1/1:8,0:6:1.25:46,1,0	0/1:9,0:8:28.24:28,0,98
chr10	3957345	.	GCCACAGCA	G	186.70	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=4.362;DP=620;FS=0.000;HRun=0;HaplotypeScore=152.5325;InbreedingCoeff=0.5347;MQ=56.27;MQ0=3;MQRankSum=0.752;QD=5.33;ReadPosRankSum=-2.302;VQSLOD=2.2214;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:21:45.15:0,45,1413	0/0:6,0:6:3.01:0,3,50	0/1:24,0:15:1.98:2,0,231	0/0:23,0:17:30.02:0,30,518	0/0:10,0:10:30.10:0,30,1010	0/0:10,0:10:24.08:0,24,833	0/0:45,0:45:99:0,102,3418	1/1:4,7:10:18.05:277,18,0	0/0:26,0:26:67.11:0,67,2167	0/0:25,0:24:60.21:0,60,1845	0/0:7,0:7:18.06:0,18,598	0/0:27,0:27:63.21:0,63,2247	0/0:11,0:11:27.09:0,27,919	0/0:31,0:31:84.27:0,84,2661	0/0:10,0:10:10.31:0,10,443	0/0:12,0:12:33.11:0,33,1109	0/0:25,0:25:42.14:0,42,1408	0/0:23,0:23:57.20:0,57,2110	0/0:12,0:11:21.07:0,21,513	0/0:3,0:3:6.02:0,6,201	0/0:123,0:120:99:0,262,7913	0/0:9,0:9:18.05:0,18,477	0/0:8,0:8:18.06:0,18,452	0/0:60,0:60:99:0,157,5250	0/0:5,0:5:6.02:0,6,247	0/0:24,0:24:57.17:0,57,1633	0/0:13,0:13:33.11:0,33,1099	0/0:14,0:14:18.06:0,18,526
chr10	3957385	.	ACCACAGAG	A	605.35	PASS	AB=0.967;AC=11;AF=0.212;AN=52;BaseQRankSum=5.335;DP=585;FS=4.517;HRun=0;HaplotypeScore=140.0215;InbreedingCoeff=0.4761;MQ=55.76;MQ0=8;MQRankSum=-0.073;QD=5.77;ReadPosRankSum=0.239;VQSLOD=2.5062;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:22:20.96:0,21,392	0/0:2,0:2:6.02:0,6,171	0/0:26,0:18:2.12:0,2,146	0/0:37,0:19:21.07:0,21,351	./.	0/0:19,0:19:42.14:0,42,1275	0/0:42,0:42:63.22:0,63,1736	1/1:5,3:7:6.01:69,6,0	0/0:29,0:29:51.17:0,51,1648	0/0:19,0:19:30.07:0,30,549	./.	0/0:26,0:26:39.12:0,39,959	0/0:14,0:14:27.09:0,27,915	0/0:32,0:32:54.16:0,54,1494	0/1:11,0:11:7.63:8,0,136	0/0:11,0:11:18.05:0,18,468	1/1:25,0:25:9.03:144,9,0	0/1:28,0:27:42.30:42,0,619	0/0:15,0:12:12.01:0,12,205	0/0:3,0:3:6.02:0,6,152	0/0:97,0:95:99:0,141,3844	0/0:6,0:6:9.03:0,9,290	0/0:6,0:6:12.04:0,12,295	0/0:47,0:46:78.27:0,78,2300	0/0:15,0:13:10.11:0,10,185	1/1:11,8:16:18.06:386,18,0	0/1:8,1:9:25.15:29,0,25	1/1:2,3:5:3.01:76,3,0
chr10	3957409	.	G	GCCACAGCA	497.89	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=7.329;DP=636;FS=6.951;HRun=0;HaplotypeScore=150.1888;InbreedingCoeff=0.0978;MQ=53.09;MQ0=27;MQRankSum=-2.694;QD=4.83;ReadPosRankSum=-0.385;VQSLOD=1.5836;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:22:42:0,42,714	0/0:5,0:5:12.02:0,12,193	0/0:24,0:7:6.38:0,6,203	0/0:34,0:12:24.07:0,24,363	0/0:8,0:7:12.01:0,12,147	0/0:18,0:18:45.15:0,45,1107	0/0:41,0:41:99:0,111,2307	0/1:13,0:12:34.94:72,0,35	0/0:30,0:30:70.48:0,70,1573	0/0:25,0:24:61.99:0,62,996	0/0:5,0:4:9.03:0,9,140	0/0:33,0:33:72.15:0,72,1346	0/0:18,0:18:51.05:0,51,1030	0/0:26,0:26:69.21:0,69,1553	0/1:17,0:17:9.73:10,0,345	0/0:13,0:13:30.08:0,30,580	0/0:19,10:30:29.43:0,29,488	0/1:33,0:32:90.32:90,0,476	0/0:15,0:11:18:0,18,296	0/0:5,0:5:12.04:0,12,215	0/0:102,0:99:99:0,212,4472	0/0:9,0:9:21.06:0,21,381	0/0:8,0:7:18.06:0,18,397	0/0:43,0:42:99:0,111,2477	0/0:16,0:13:6.74:0,7,141	0/1:25,0:18:89.26:338,0,89	0/1:9,0:7:24.94:29,0,25	1/1:6,0:5:6.01:86,6,0
chr10	3957417	.	GCCACAGCA	G	448.92	PASS	AB=0.896;AC=5;AF=0.089;AN=56;BaseQRankSum=4.700;DP=647;FS=4.789;HRun=0;HaplotypeScore=142.7123;InbreedingCoeff=-0.0040;MQ=52.61;MQ0=34;MQRankSum=-3.707;QD=4.28;ReadPosRankSum=-2.738;VQSLOD=1.6843;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:21:17.34:0,17,767	0/0:5,0:5:8.39:0,8,187	0/0:27,0:7:2.75:0,3,127	0/0:32,0:9:17.89:0,18,264	0/0:7,0:6:15.02:0,15,216	0/0:18,0:17:45.15:0,45,1486	0/0:41,0:41:99:0,111,2452	0/0:13,0:11:21.50:0,21,256	0/0:30,0:30:80.37:0,80,1954	0/0:27,0:25:36.64:0,37,662	0/0:5,0:4:8.88:0,9,80	0/0:30,0:30:81.19:0,81,1558	0/0:18,0:18:51.15:0,51,1172	0/0:26,0:26:54.83:0,55,1447	0/1:12,6:18:20.62:21,0,509	0/0:11,0:11:28.34:0,28,573	0/0:28,0:28:45.11:0,45,652	0/1:36,0:35:99:328,0,1071	0/0:14,0:9:23.67:0,24,318	0/0:4,0:4:11.63:0,12,189	0/0:108,0:103:99:0,259,5473	0/0:11,0:11:22.08:0,22,400	0/0:9,0:8:15.05:0,15,404	0/0:44,0:43:99:0,102,2684	0/1:12,7:17:3.30:3,0,123	0/1:25,0:18:99:150,0,218	0/0:10,0:8:1.55:0,2,4	0/1:7,0:6:7.12:58,0,7
chr10	3957448	.	AGCCACAGC	A	547.15	PASS	AB=0.900;AC=4;AF=0.071;AN=56;BaseQRankSum=2.487;DP=701;FS=0.000;HRun=0;HaplotypeScore=158.9905;InbreedingCoeff=0.2735;MQ=54.84;MQ0=25;MQRankSum=-3.767;QD=14.03;ReadPosRankSum=-1.980;VQSLOD=2.5891;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:60.19:0,60,2017	0/0:7,0:7:18.03:0,18,391	0/0:25,0:3:4.27:0,4,107	0/0:33,0:8:2.13:0,2,351	0/0:13,0:12:33.07:0,33,783	0/0:24,0:24:66.22:0,66,1531	0/0:46,0:45:99:0,117,3346	0/0:18,0:17:45.14:0,45,860	0/0:31,0:31:87.28:0,87,2660	0/0:22,0:18:48.09:0,48,1167	0/0:8,0:7:15.05:0,15,423	0/0:35,0:35:90.29:0,90,2721	0/0:20,0:20:48.15:0,48,1634	0/0:29,0:29:76.10:0,76,2231	0/0:23,0:23:57.20:0,57,1991	0/0:17,0:16:42.14:0,42,1351	0/0:33,0:33:78.34:0,78,2471	0/0:31,0:31:59.60:0,60,2658	0/0:19,0:15:45.12:0,45,1123	0/0:5,0:5:9.03:0,9,236	0/0:114,0:112:99:0,280,7875	0/0:18,0:16:42.12:0,42,1208	0/0:8,0:8:15.05:0,15,410	0/0:37,0:37:99:0,99,2914	0/0:17,0:17:30.09:0,30,877	0/1:22,0:20:99:423,0,162	1/1:2,11:12:5.07:118,5,0	0/1:3,1:4:22.67:111,0,23
chr10	3959131	.	A	AT	1800.27	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-4.178;DP=381;FS=1.192;HRun=9;HaplotypeScore=46.8231;InbreedingCoeff=0.8518;MQ=69.33;MQ0=0;MQRankSum=-0.213;QD=21.43;ReadPosRankSum=0.781;VQSLOD=4.0552;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,28:30:69.19:763,69,0	0/0:11,0:11:26.99:0,27,234	0/0:7,0:3:2.98:0,3,22	0/0:11,0:8:17.19:0,17,132	0/0:17,0:17:41.98:0,42,362	0/0:19,0:19:47.98:0,48,417	0/0:7,0:7:14.98:0,15,130	0/0:3,0:24:39.17:0,39,115	0/0:7,0:7:14.99:0,15,130	0/0:22,0:24:58.01:0,58,478	0/0:14,0:14:32.93:0,33,278	0/0:10,0:11:14.02:0,14,110	0/0:3,0:3:9:0,9,78	0/0:3,0:3:9:0,9,78	1/1:0,11:11:21.06:231,21,0	0/0:4,0:4:12:0,12,104	0/0:3,0:26:36.66:0,37,108	1/1:5,20:25:31.06:558,31,0	0/0:19,0:21:55.06:0,55,455	0/0:7,0:7:14.96:0,15,123	0/0:8,0:8:11.99:0,12,104	0/0:7,0:7:11.97:0,12,98	0/0:3,0:3:6:0,6,52	0/0:10,0:10:23.99:0,24,208	1/1:2,16:18:16.06:405,16,0	0/0:19,0:19:44.97:0,45,386	0/0:12,0:12:32.96:0,33,279	0/0:22,0:22:41.96:0,42,365
chr10	3962086	.	A	AATGGATGG	3086.46	PASS	AC=16;AF=0.296;AN=54;BaseQRankSum=4.368;DP=779;FS=2.440;HRun=0;HaplotypeScore=178.2547;InbreedingCoeff=0.8960;MQ=62.44;MQ0=18;MQRankSum=-3.244;QD=14.22;ReadPosRankSum=-0.729;VQSLOD=2.9247;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:22,8:41:9.03:333,9,0	0/0:14,0:14:15.02:0,15,298	0/0:38,0:17:3.01:0,3,43	./.	0/0:30,0:30:39.03:0,39,882	0/0:32,0:32:60.21:0,60,1414	0/0:30,0:30:33.07:0,33,639	0/0:28,0:27:7.04:0,7,340	0/0:25,0:26:48.16:0,48,1138	0/0:25,0:25:33.10:0,33,646	0/0:22,0:22:45.15:0,45,925	0/0:31,0:31:60.11:0,60,1156	0/0:30,0:30:33.11:0,33,784	0/0:22,0:22:33.09:0,33,681	1/1:6,0:23:29.83:245,30,0	0/0:23,0:23:36.11:0,36,725	1/1:16,0:38:42.37:344,42,0	1/1:16,0:31:29.33:246,29,0	0/0:20,0:18:12.04:0,12,281	0/0:18,0:18:36.12:0,36,801	0/0:52,0:52:99:0,102,2263	0/0:30,0:30:48.15:0,48,1007	0/0:17,0:17:12.04:0,12,249	0/0:24,0:24:54.19:0,54,1237	1/1:16,0:23:14.48:118,14,0	1/1:15,10:30:18.03:1259,18,0	1/1:8,13:23:15.05:612,15,0	1/1:4,2:6:3.01:123,3,0
chr10	3962904	.	TGACTTACAAAG	T	1115.15	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.621;DP=794;FS=3.506;HRun=0;HaplotypeScore=244.6072;InbreedingCoeff=0.9939;MQ=91.11;MQ0=0;MQRankSum=-6.757;QD=39.83;ReadPosRankSum=-0.427;VQSLOD=3.1420;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,26:28:47.20:1210,47,0	0/0:7,0:7:21.07:0,21,1224	0/0:30,0:30:84.26:0,84,3849	0/0:35,0:35:96.33:0,96,4719	0/0:16,0:16:48.16:0,48,2588	0/0:32,0:32:93.32:0,93,5107	0/0:28,0:28:81.28:0,81,4174	0/0:40,0:40:99:0,120,6429	0/0:33,0:33:99:0,99,5515	0/0:33,0:33:96.33:0,96,5263	0/0:12,0:12:36.11:0,36,1778	0/0:43,0:43:99:0,126,6751	0/0:22,0:22:63.22:0,63,3514	0/0:28,0:28:84.29:0,84,4728	0/0:39,0:39:99:0,117,6200	0/0:26,0:26:78.25:0,78,4152	0/0:38,0:38:99:0,114,6315	0/0:22,0:22:63.22:0,63,3498	0/0:25,0:25:75.26:0,75,4259	0/0:37,0:37:99:0,111,5805	0/0:64,0:64:99:0,190,10353	0/0:25,0:25:75.26:0,75,4262	0/0:21,0:21:60.21:0,60,3325	0/0:27,0:27:78.22:0,78,4038	0/0:20,0:20:54.19:0,54,3112	0/0:25,0:25:75.25:0,75,3940	0/0:30,0:30:90.31:0,90,4930	0/0:8,0:8:24.08:0,24,1397
chr10	3964357	.	CTG	C	1710.28	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=8.619;DP=801;FS=4.608;HRun=0;HaplotypeScore=91.9213;InbreedingCoeff=0.9959;MQ=87.34;MQ0=0;MQRankSum=-4.775;QD=32.89;ReadPosRankSum=1.629;VQSLOD=5.7605;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,50:52:99:1805,126,0	0/0:7,0:7:21.06:0,21,355	0/0:33,0:33:83.44:0,83,1514	0/0:32,0:32:84.29:0,84,1437	0/0:29,0:29:87.28:0,87,1556	0/0:15,0:15:42.14:0,42,770	0/0:27,0:27:78.24:0,78,1397	0/0:24,0:24:66.23:0,66,1207	0/0:34,0:34:99:0,99,1815	0/0:37,0:37:99:0,108,1890	0/0:28,0:28:81.28:0,81,1482	0/0:23,0:23:66.23:0,66,1210	0/0:25,0:25:72.25:0,72,1317	0/0:23,0:23:69.23:0,69,1236	0/0:31,0:31:84.29:0,84,1540	0/0:34,0:34:96.33:0,96,1760	0/0:29,0:29:87.30:0,87,1595	0/0:29,0:29:81.28:0,81,1474	0/0:20,0:20:57.17:0,57,942	0/0:29,0:29:81.25:0,81,1415	0/0:49,0:49:99:0,144,2531	0/0:24,0:24:72.22:0,72,1286	0/0:17,0:17:48.16:0,48,879	0/0:40,0:40:99:0,111,2026	0/0:21,0:21:63.22:0,63,1155	0/0:37,0:37:99:0,102,1867	0/0:37,0:37:99:0,108,1978	0/0:15,0:15:45.15:0,45,825
chr10	3966658	.	CAGA	C	1049.82	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.494;DP=739;FS=0.000;HRun=0;HaplotypeScore=101.6541;InbreedingCoeff=0.9959;MQ=84.78;MQ0=0;MQRankSum=-3.120;QD=41.99;ReadPosRankSum=-2.886;VQSLOD=4.1905;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,120,2748	0/0:7,0:7:21.06:0,21,409	0/0:26,0:26:75.18:0,75,1486	0/0:20,0:20:47.35:0,47,1102	0/0:31,0:31:90.31:0,90,2054	0/0:23,0:23:69.21:0,69,1501	0/0:30,0:30:87.27:0,87,1884	1/1:1,24:25:72.21:1145,72,0	0/0:24,0:24:69.24:0,69,1568	0/0:34,0:34:99:0,99,2223	0/0:21,0:21:63.16:0,63,1323	0/0:22,0:22:66.23:0,66,1520	0/0:30,0:30:84.27:0,84,1875	0/0:21,0:21:63.19:0,63,1345	0/0:33,0:33:99:0,99,2236	0/0:29,0:29:81.26:0,81,1823	0/0:28,0:28:84.25:0,84,1888	0/0:26,0:26:69.24:0,69,1561	0/0:18,0:18:54.19:0,54,1210	0/0:24,0:24:72.25:0,72,1661	0/0:45,0:45:99:0,135,3090	0/0:31,0:31:90.30:0,90,2023	0/0:18,0:18:48.16:0,48,1107	0/0:24,0:24:69.21:0,69,1503	0/0:24,0:24:66.23:0,66,1522	0/0:33,0:33:96.31:0,96,2131	0/0:38,0:38:99:0,108,2333	0/0:14,0:14:42.14:0,42,969
chr10	3966969	.	CTGTG	C	97.38	PASS	AB=1.000;AC=10;AF=0.208;AN=48;BaseQRankSum=2.820;DP=568;FS=6.757;HRun=0;HaplotypeScore=93.4536;InbreedingCoeff=0.4567;MQ=65.89;MQ0=23;MQRankSum=-0.215;QD=0.81;ReadPosRankSum=0.084;VQSLOD=0.9183;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:22:2.84:45,3,0	0/0:9,0:8:3.01:0,3,69	./.	./.	0/0:13,0:11:6.02:0,6,104	0/1:21,0:19:15.61:16,0,131	1/1:23,2:25:3.01:46,3,0	./.	0/0:17,0:17:12.04:0,12,178	0/0:19,0:18:4.24:0,4,27	0/0:11,0:11:9.03:0,9,178	0/0:30,0:29:9.50:0,10,158	0/0:16,0:16:15.05:0,15,280	0/0:23,0:23:3.01:0,3,41	1/1:16,0:16:8.94:69,9,0	0/0:15,0:16:12.04:0,12,227	1/1:20,2:21:2.72:44,3,0	0/0:12,0:12:1.22:0,1,3	0/0:19,0:18:9.03:0,9,181	0/0:16,0:16:12.84:0,13,155	0/0:48,0:47:12.04:0,12,249	0/1:13,0:13:0:0,0,0	0/0:13,0:12:8.99:0,9,122	0/0:33,0:33:18.06:0,18,303	./.	0/0:22,0:22:20.86:0,21,366	0/0:16,0:16:12.04:0,12,249	0/0:6,0:5:9.03:0,9,179
chr10	3967041	.	CAT	C	586.52	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=5.205;DP=502;FS=6.495;HRun=0;HaplotypeScore=72.4480;InbreedingCoeff=0.6700;MQ=64.22;MQ0=3;MQRankSum=2.504;QD=20.95;ReadPosRankSum=0.579;VQSLOD=3.3841;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,24:24:41.71:680,42,0	0/1:4,0:4:7.51:8,0,169	0/0:22,0:18:29.10:0,29,546	0/0:27,1:19:21.82:0,22,425	0/0:7,0:7:21.07:0,21,413	0/0:11,0:11:27.08:0,27,504	0/0:19,0:19:56.60:0,57,1056	0/0:24,0:24:69.17:0,69,1301	0/0:10,0:10:27.09:0,27,547	0/0:22,0:22:66.22:0,66,1295	0/0:12,0:12:32.96:0,33,623	0/0:18,0:18:54.12:0,54,1038	0/0:13,0:13:38.85:0,39,704	0/0:19,0:19:42.08:0,42,945	0/0:19,0:19:57.15:0,57,1018	0/0:11,0:11:30.96:0,31,517	0/0:29,0:29:84.03:0,84,1543	0/0:18,0:18:49.05:0,49,960	0/0:8,0:8:23.40:0,23,360	0/0:9,0:9:27.08:0,27,509	0/0:46,0:45:99:0,117,2201	0/0:13,0:13:36.07:0,36,726	0/0:15,0:15:42.11:0,42,767	0/0:39,0:39:99:0,101,2036	0/0:20,0:20:60.14:0,60,1122	0/0:14,0:14:42.11:0,42,748	0/0:15,0:15:14.67:0,15,761	0/0:12,0:12:35.99:0,36,600
chr10	3969657	.	C	CA	556.95	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-3.070;DP=498;FS=3.150;HRun=7;HaplotypeScore=45.9450;InbreedingCoeff=0.8794;MQ=74.61;MQ0=0;MQRankSum=-0.481;QD=25.32;ReadPosRankSum=-0.431;VQSLOD=3.6756;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:48.07:0,48,463	0/0:5,0:5:15.02:0,15,145	0/0:10,0:11:17.01:0,17,137	0/0:10,0:10:9.94:0,10,160	0/0:29,0:29:78.10:0,78,747	0/0:21,0:21:63.10:0,63,608	0/0:12,0:12:30.04:0,30,290	0/0:20,0:20:45.05:0,45,429	0/0:20,0:20:50.75:0,51,492	0/0:28,0:28:78.12:0,78,753	0/0:28,0:28:84.14:0,84,811	0/0:12,0:12:36.06:0,36,348	0/0:14,0:14:39.06:0,39,376	0/0:14,0:14:36.05:0,36,348	0/0:14,0:14:33.04:0,33,313	0/0:11,0:11:30.05:0,30,290	1/1:3,19:22:54.17:652,54,0	0/0:28,0:28:72.07:0,72,686	0/0:13,0:13:39.06:0,39,376	0/0:32,0:32:84.12:0,84,805	0/0:3,0:3:9.01:0,9,87	0/0:28,0:28:81.13:0,81,782	0/0:22,0:22:60.09:0,60,579	0/0:9,0:9:24.04:0,24,232	0/0:20,0:20:54.06:0,54,511	0/0:21,0:21:60.08:0,60,575	0/0:22,0:22:54.06:0,54,510	0/0:11,0:11:30.05:0,30,290
chr10	3972600	.	CAT	C	690.41	PASS	AB=0.975;AC=8;AF=0.143;AN=56;BaseQRankSum=3.481;DP=437;FS=1.698;HRun=0;HaplotypeScore=66.7575;InbreedingCoeff=0.6329;MQ=54.75;MQ0=16;MQRankSum=1.115;QD=10.01;ReadPosRankSum=-2.571;VQSLOD=2.4549;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:61.43:0,61,826	0/0:9,0:9:24.06:0,24,396	0/0:10,0:4:5.23:0,5,44	0/1:11,0:4:2.98:3,0,71	0/0:13,0:13:39.11:0,39,664	0/0:13,0:13:33.10:0,33,521	0/0:24,0:24:67.11:0,67,1079	1/1:9,14:18:20.87:556,21,0	0/0:18,0:18:46.39:0,46,712	0/0:28,0:27:76.48:0,76,1283	0/0:7,0:7:18.03:0,18,271	0/0:15,0:15:45.08:0,45,650	0/0:13,0:13:39.07:0,39,579	0/0:14,0:14:37.37:0,37,603	0/0:18,0:18:44.76:0,45,648	0/0:9,0:9:23.54:0,24,377	1/1:11,0:10:20.98:235,21,0	0/0:8,0:8:21.06:0,21,273	0/0:21,0:18:39.09:0,39,585	0/0:20,0:19:48.52:0,49,777	0/0:24,0:24:63.21:0,63,1108	0/0:20,0:20:57.08:0,57,1001	0/0:14,0:14:41.47:0,41,501	0/0:20,0:19:55.40:0,55,834	0/0:10,0:10:10.57:0,11,432	0/0:16,0:15:40.38:0,40,642	0/1:18,1:18:24.06:24,0,338	1/1:5,0:1:2.04:6,2,0
chr10	3972634	.	TACACACACACAC	T	706.84	PASS	AC=8;AF=0.154;AN=52;BaseQRankSum=4.832;DP=506;FS=17.692;HRun=0;HaplotypeScore=161.2050;InbreedingCoeff=0.7384;MQ=49.94;MQ0=14;MQRankSum=-3.015;QD=10.55;ReadPosRankSum=-0.717;VQSLOD=1.5788;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:23:21.06:0,21,587	0/0:15,0:15:27.08:0,27,1214	./.	./.	0/0:13,0:12:18.06:0,18,895	0/0:15,0:23:30.10:0,30,1544	0/0:24,0:24:18.04:0,18,817	0/0:16,0:10:6.02:0,6,227	0/0:25,0:29:48.16:0,48,2346	0/0:26,0:26:57.18:0,57,2477	0/0:9,0:9:9.03:0,9,494	0/0:23,0:22:48.15:0,48,2284	0/0:15,0:15:33.09:0,33,1367	0/0:16,0:16:30.09:0,30,1440	0/0:13,0:21:14.66:0,15,136	0/0:20,0:20:33.11:0,33,1650	1/1:9,0:11:1.79:52,2,0	0/0:7,0:11:3.16:0,3,130	0/0:18,0:16:30.03:0,30,1093	0/0:15,0:16:23.74:0,24,996	0/0:18,0:18:24.08:0,24,1071	0/0:31,0:31:54.17:0,54,2317	0/0:17,0:18:27.08:0,27,1110	0/0:27,0:27:60.21:0,60,2823	0/0:5,0:11:5.93:0,6,40	1/1:7,6:13:14.77:284,15,0	1/1:19,14:37:9.94:443,10,0	1/1:2,0:1:3.01:58,3,0
chr10	3972746	.	T	TGA	186.09	PASS	AB=0.997;AC=21;AF=0.420;AN=50;BaseQRankSum=-2.091;DP=534;FS=4.828;HRun=0;HaplotypeScore=84.4784;InbreedingCoeff=0.0501;MQ=65.20;MQ0=6;MQRankSum=0.451;QD=0.59;ReadPosRankSum=-2.091;VQSLOD=1.2555;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:19,0:18:0:0,0,0	0/1:8,0:8:2.91:3,0,14	./.	0/1:28,0:14:0:0,0,0	0/0:24,0:24:2.98:0,3,23	0/1:22,0:22:11.76:12,0,60	0/0:23,0:25:9.31:0,9,50	0/1:18,0:17:0:0,0,0	1/1:11,10:21:5.99:88,6,0	0/1:17,0:17:6.57:18,0,7	./.	0/0:23,0:22:8.42:0,8,76	0/1:21,0:21:14.92:15,0,53	0/1:17,0:18:11.51:12,0,39	0/1:27,0:30:27.65:28,0,165	0/0:18,0:18:4.79:0,5,27	./.	0/0:16,0:15:3.38:0,3,19	1/1:20,0:19:2.60:10,3,0	0/1:16,0:16:11.34:11,0,72	1/1:27,0:26:5.24:83,5,0	1/1:13,0:13:2.99:24,3,0	0/1:17,0:17:12.08:12,0,54	0/0:20,0:20:5.80:0,6,45	0/0:18,0:21:8.35:0,8,43	1/1:19,0:19:0.47:1,0,0	0/0:10,0:17:11.36:0,11,56	0/0:7,0:9:2.84:0,3,14
chr10	3972875	.	T	TA	810.88	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-6.718;DP=654;FS=0.743;HRun=6;HaplotypeScore=66.1067;InbreedingCoeff=0.9911;MQ=81.02;MQ0=0;MQRankSum=-3.284;QD=28.96;ReadPosRankSum=-4.004;VQSLOD=2.4949;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:50.99:0,51,520	0/0:7,0:7:21.05:0,21,214	0/0:20,0:20:50.70:0,51,479	0/0:18,0:18:31.30:0,31,408	0/0:19,0:19:54.11:0,54,543	0/0:37,0:37:99:0,105,1069	0/0:33,0:33:93.18:0,93,935	1/1:4,24:27:72.23:906,72,0	0/0:20,0:20:51.09:0,51,513	0/0:31,0:31:78.16:0,78,792	0/0:18,0:18:45.10:0,45,459	0/0:27,0:27:75.16:0,75,765	0/0:23,0:23:63.14:0,63,641	0/0:15,0:15:45.08:0,45,451	0/0:28,0:28:78.18:0,78,796	0/0:24,0:24:69.14:0,69,697	0/0:16,0:16:42.10:0,42,429	0/0:26,0:26:72.13:0,72,725	0/0:25,0:25:69.15:0,69,703	0/0:26,0:26:69.14:0,69,697	0/0:29,0:29:81.18:0,81,825	0/0:28,0:28:78.15:0,78,788	0/0:19,0:19:48.10:0,48,489	0/0:20,0:20:57.13:0,57,581	0/0:22,0:22:57.13:0,57,581	0/0:23,0:23:66.14:0,66,668	0/0:39,0:38:93.16:0,93,935	0/0:11,0:11:20.66:0,21,214
chr10	3974783	.	G	GA	1717.92	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-10.670;DP=572;FS=1.122;HRun=7;HaplotypeScore=54.3960;InbreedingCoeff=0.9984;MQ=79.55;MQ0=0;MQRankSum=-0.917;QD=27.71;ReadPosRankSum=-2.421;VQSLOD=3.3670;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,23:26:66.16:781,66,0	0/0:14,0:14:36.05:0,36,348	0/0:22,0:22:38.45:0,38,332	0/0:17,0:17:28.57:0,29,261	0/0:32,0:32:84.13:0,84,811	0/0:20,0:20:54.07:0,54,521	0/0:18,0:18:42.04:0,42,399	1/1:5,31:35:93.20:1059,93,0	0/0:16,0:16:48.06:0,48,457	0/0:23,0:23:60.09:0,60,579	0/0:17,0:17:48.08:0,48,464	0/0:14,0:14:39.05:0,39,371	0/0:22,0:22:60.03:0,60,569	0/0:19,0:19:57.09:0,57,550	0/0:22,0:22:63.09:0,63,603	0/0:29,0:29:78.12:0,78,753	0/0:20,0:20:57.09:0,57,550	0/0:13,0:13:33:0,33,309	0/0:16,0:16:39.06:0,39,377	0/0:25,0:25:60.06:0,60,568	0/0:11,0:11:30.03:0,30,284	0/0:16,0:16:48.08:0,48,464	0/0:27,0:27:81.13:0,81,782	0/0:9,0:9:27.04:0,27,261	0/0:28,0:28:78.12:0,78,753	0/0:28,0:28:78.09:0,78,739	0/0:21,0:21:63.10:0,63,608	0/0:11,0:11:33.05:0,33,319
chr10	3976518	.	GA	G	717.95	PASS	AB=0.500;AC=11;AF=0.212;AN=52;BaseQRankSum=4.386;DP=170;FS=14.203;HRun=9;HaplotypeScore=29.4738;InbreedingCoeff=0.6376;MQ=82.83;MQ0=1;MQRankSum=-2.277;QD=14.08;ReadPosRankSum=-1.414;VQSLOD=1.2827;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:0,0:4:5.04:5,0,8	0/0:5,0:5:15.04:0,15,171	0/0:10,0:8:11.95:0,12,111	0/0:11,0:8:8.96:0,9,78	0/0:3,0:3:3.01:0,3,35	0/0:4,0:4:12.04:0,12,138	0/0:4,0:4:9.03:0,9,104	1/1:3,7:9:21:190,21,0	./.	0/0:10,0:10:9.03:0,9,104	0/0:9,0:9:15.04:0,15,169	0/0:4,0:4:3.01:0,3,35	0/0:5,0:5:9.03:0,9,104	0/0:3,0:3:8.82:0,9,83	./.	0/0:5,0:5:12.04:0,12,139	1/1:2,14:15:33.02:299,33,0	0/0:14,0:13:33.10:0,33,380	0/0:7,0:7:15.04:0,15,173	0/0:1,0:1:3.01:0,3,35	0/0:2,0:2:3.01:0,3,35	0/0:4,0:4:6.02:0,6,69	0/0:3,0:3:9.03:0,9,104	0/0:2,0:2:6.02:0,6,69	0/0:9,0:9:18.01:0,18,193	1/1:1,3:4:9:82,9,0	1/1:4,10:14:24.01:219,24,0	1/1:0,3:3:9:81,9,0
chr10	3976544	.	ATGTGTG	A	387.75	PASS	AB=1.000;AC=13;AF=0.361;AN=36;BaseQRankSum=5.015;DP=70;FS=26.576;HRun=0;HaplotypeScore=34.8462;InbreedingCoeff=0.4177;MQ=50.44;MQ0=2;MQRankSum=-2.543;QD=8.08;ReadPosRankSum=0.745;VQSLOD=0.3171;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	0/1:11,0:4:0.16:0,0,33	./.	0/0:4,0:4:12.04:0,12,286	0/0:1,0:1:3.01:0,3,74	1/1:3,2:3:3.01:60,3,0	./.	0/0:2,0:2:6.02:0,6,186	0/0:2,0:2:6.01:0,6,97	0/0:1,0:1:3.01:0,3,72	0/0:1,0:1:3.01:0,3,72	0/0:2,0:2:6.02:0,6,144	./.	0/0:1,0:1:3.01:0,3,75	1/1:12,0:11:6.02:90,6,0	1/1:11,1:12:1.45:131,1,0	0/0:2,0:2:6.02:0,6,156	0/0:1,0:1:3.01:0,3,72	./.	./.	./.	0/0:1,0:1:3.01:0,3,48	1/1:2,0:2:3.15:12,3,0	1/1:2,0:2:6.02:94,6,0	1/1:4,0:4:9.01:120,9,0	./.
chr10	3977723	.	TA	T	549.78	PASS	AB=0.833;AC=7;AF=0.159;AN=44;BaseQRankSum=4.405;DP=214;FS=21.736;HRun=11;HaplotypeScore=31.3677;InbreedingCoeff=0.6113;MQ=84.80;MQ0=16;MQRankSum=-3.026;QD=11.95;ReadPosRankSum=4.213;VQSLOD=1.0758;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:4:5.75:0,6,30	0/0:7,0:7:21.05:0,21,223	0/0:21,0:10:23.22:0,23,176	0/0:21,0:13:8.66:0,9,61	0/0:15,0:15:42.09:0,42,438	0/0:17,0:17:39.03:0,39,402	0/0:4,0:4:11.93:0,12,104	0/0:1,0:1:2.74:0,3,12	0/0:8,0:8:18.05:0,18,192	0/0:8,0:8:21.05:0,21,224	0/0:11,0:11:27.04:0,27,272	0/1:4,1:5:9.62:10,0,105	0/0:7,0:7:17.99:0,18,172	0/0:4,0:4:12.03:0,12,128	1/1:1,3:4:5.99:49,6,0	0/0:9,0:9:24.05:0,24,248	./.	1/1:6,18:22:46.97:375,47,0	0/0:15,0:14:35.66:0,36,346	0/0:7,0:7:21.04:0,21,216	./.	0/0:1,0:1:3.01:0,3,32	./.	0/0:1,0:1:2.96:0,3,19	1/1:0,12:12:29.97:246,30,0	./.	./.	./.
chr10	3978499	.	T	TA	1118.28	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-7.169;DP=717;FS=1.527;HRun=1;HaplotypeScore=70.0187;InbreedingCoeff=0.9978;MQ=74.05;MQ0=1;MQRankSum=-3.422;QD=39.94;ReadPosRankSum=2.706;VQSLOD=4.4404;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,120,1523	0/0:15,0:15:45.15:0,45,584	0/0:33,0:32:95.96:0,96,1177	0/0:28,0:28:75.71:0,76,955	0/0:35,0:35:99:0,105,1333	0/0:33,0:33:99:0,99,1273	0/0:27,0:27:78.23:0,78,985	0/0:31,0:31:90.28:0,90,1143	0/0:13,0:13:36.11:0,36,455	0/0:23,0:23:69.21:0,69,874	0/0:13,0:13:39.11:0,39,491	0/0:40,0:40:99:0,120,1530	0/0:32,0:32:93.29:0,93,1192	0/0:22,0:22:63.20:0,63,818	0/0:28,0:28:84.25:0,84,1061	0/0:22,0:22:63.20:0,63,818	1/1:0,28:28:81.27:1213,81,0	0/0:16,0:16:45.15:0,45,584	0/0:23,0:23:63.20:0,63,805	0/0:20,0:20:60.20:0,60,778	0/0:31,0:31:90.28:0,90,1152	0/0:20,0:20:60.16:0,60,747	0/0:23,0:23:60.19:0,60,777	0/0:24,1:25:27.31:0,27,835	0/0:24,0:24:63.19:0,63,817	0/0:25,0:25:75.24:0,75,973	0/0:37,0:37:99:0,108,1363	0/0:9,0:9:27.09:0,27,350
chr10	3979041	.	AACACAC	A	577.03	PASS	AC=6;AF=0.115;AN=52;BaseQRankSum=4.516;DP=500;FS=11.613;HRun=0;HaplotypeScore=112.6191;InbreedingCoeff=0.7327;MQ=67.35;MQ0=6;MQRankSum=-3.595;QD=12.02;ReadPosRankSum=0.548;VQSLOD=2.0314;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:38.06:0,38,858	0/0:4,0:4:12.04:0,12,328	./.	./.	0/0:14,0:16:12.01:0,12,244	0/0:17,0:16:24.54:0,25,530	0/0:20,0:19:14.98:0,15,385	0/0:28,0:27:27.06:0,27,539	0/0:8,0:9:15.05:0,15,363	0/0:17,0:19:27.09:0,27,616	0/0:12,0:12:12.04:0,12,362	0/0:18,0:21:21.04:0,21,434	0/0:12,0:13:24.45:0,24,504	0/0:10,0:11:15.03:0,15,359	1/1:4,5:9:12.04:243,12,0	0/0:10,0:10:12.51:0,13,344	0/0:22,0:22:21.06:0,21,673	0/0:14,0:14:2.97:0,3,20	0/0:12,0:12:10.56:0,11,183	1/1:11,2:14:0.67:2,1,0	0/0:16,0:17:21.05:0,21,497	0/0:21,0:21:27.02:0,27,734	0/0:18,0:21:21.07:0,21,408	0/0:23,0:23:24.08:0,24,669	1/1:14,9:25:24.08:447,24,0	0/0:24,0:23:45.62:0,46,1041	0/0:21,0:22:27.56:0,28,616	0/0:6,0:6:4.57:0,5,86
chr10	3981194	.	G	GGAA	660.25	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=5.781;DP=652;FS=2.452;HRun=0;HaplotypeScore=112.7769;InbreedingCoeff=0.5201;MQ=56.34;MQ0=24;MQRankSum=-3.558;QD=12.46;ReadPosRankSum=-1.479;VQSLOD=3.2169;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:36,0:35:99:168,0,164	0/0:6,0:5:14.99:0,15,173	0/0:16,0:8:17.42:0,17,208	0/0:30,0:13:5.48:0,5,181	0/0:25,0:23:63.17:0,63,975	0/0:20,0:19:54.14:0,54,810	0/0:43,0:40:90.68:0,91,1761	1/1:7,10:14:35.29:598,35,0	0/0:19,0:19:51.15:0,51,831	0/0:31,0:30:87.23:0,87,1313	0/0:13,0:13:36.11:0,36,563	0/0:23,0:22:66.17:0,66,994	0/0:24,0:23:68.87:0,69,1075	0/0:26,0:26:75.17:0,75,1140	0/0:26,0:25:9.01:0,9,334	0/0:16,0:15:45.13:0,45,710	0/0:31,0:26:59.84:0,60,742	0/0:20,0:20:28.84:0,29,612	0/0:15,0:13:39.10:0,39,572	0/0:25,0:24:69.19:0,69,1082	0/0:40,0:37:99:0,111,1676	0/0:24,0:24:37.45:0,37,1070	0/0:13,0:12:33.09:0,33,498	0/0:34,0:33:93.20:0,93,1432	0/0:16,0:15:8.39:0,8,113	0/0:28,0:28:42.04:0,42,921	0/0:31,0:31:67.39:0,67,912	0/0:4,0:4:8.72:0,9,102
chr10	3981200	.	G	GGAGGAGGAA	3616.07	PASS	AB=1.000;AC=17;AF=0.315;AN=54;BaseQRankSum=9.477;DP=643;FS=0.000;HRun=0;HaplotypeScore=170.2384;InbreedingCoeff=0.8726;MQ=55.47;MQ0=26;MQRankSum=-7.802;QD=16.07;ReadPosRankSum=1.266;VQSLOD=2.3887;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:36,0:35:2.87:96,3,0	0/0:6,0:5:6.01:0,6,98	./.	0/1:28,0:11:0:0,0,0	0/0:24,0:22:54.12:0,54,1167	0/0:20,0:19:39.09:0,39,804	0/0:42,0:39:95.85:0,96,1619	0/0:14,0:11:7.79:0,8,45	0/0:19,0:19:54.10:0,54,941	0/0:29,0:28:56.97:0,57,1291	0/0:13,0:13:33.06:0,33,686	0/0:21,0:19:45.10:0,45,995	0/0:22,0:21:42.09:0,42,1009	0/0:25,0:25:57.14:0,57,1252	1/1:11,14:28:18.03:435,18,0	0/0:18,0:17:36.06:0,36,706	1/1:31,0:26:26.95:295,27,0	1/1:20,0:20:48:739,48,0	0/0:15,0:12:23.77:0,24,449	0/0:24,0:23:60.13:0,60,1246	0/0:42,0:39:86.84:0,87,1522	0/0:24,0:24:63.97:0,64,1147	0/0:12,0:11:27.03:0,27,394	0/0:34,0:33:72.02:0,72,1353	1/1:1,14:17:9.03:334,9,0	1/1:29,0:29:38.83:835,39,0	1/1:30,0:30:71.77:825,72,0	1/1:4,0:4:3.48:58,3,0
chr10	3981230	.	AGAGGAGGAG	A	1040.84	PASS	AB=0.927;AC=6;AF=0.115;AN=52;BaseQRankSum=8.846;DP=585;FS=8.586;HRun=0;HaplotypeScore=173.2480;InbreedingCoeff=0.1496;MQ=53.02;MQ0=15;MQRankSum=-6.595;QD=10.51;ReadPosRankSum=-0.183;VQSLOD=2.0481;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:36:7.97:0,8,1722	0/0:4,0:4:12.04:0,12,291	./.	./.	0/0:28,0:27:75.23:0,75,2331	0/0:14,0:14:42.14:0,42,1609	0/0:35,0:35:93.30:0,93,2631	0/0:15,0:11:27.09:0,27,375	0/0:22,0:21:57.19:0,57,1853	0/0:30,0:29:81.27:0,81,2630	0/0:14,0:13:36.12:0,36,1098	0/0:23,0:22:63.22:0,63,1991	0/0:20,0:20:54.19:0,54,1932	0/0:23,0:23:63.19:0,63,2143	0/0:30,0:29:2.42:0,2,698	0/0:15,0:15:42.14:0,42,1341	1/1:23,0:21:6.39:165,6,0	0/1:22,0:22:47.94:48,0,1278	0/0:24,0:21:60.19:0,60,1370	0/0:25,0:25:69.17:0,69,2079	0/0:34,0:33:96.31:0,96,2922	0/0:22,0:22:63.20:0,63,1682	0/0:11,0:11:24.08:0,24,775	0/0:32,0:30:81.26:0,81,2799	0/0:19,0:19:16.99:0,17,305	0/1:13,9:22:99:509,0,863	0/1:29,0:29:99:411,0,1163	0/1:3,0:3:28.85:29,0,145
chr10	3981248	.	AGAGGAAGAAGAAGAG	A	337.32	PASS	AB=0.862;AC=3;AF=0.054;AN=56;BaseQRankSum=6.252;DP=600;FS=3.817;HRun=0;HaplotypeScore=249.1921;InbreedingCoeff=-0.0631;MQ=54.41;MQ0=7;MQRankSum=-5.169;QD=4.16;ReadPosRankSum=1.069;VQSLOD=2.6762;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:39:87.29:0,87,3517	0/0:4,0:4:12.04:0,12,720	0/0:3,0:2:6.02:0,6,245	0/0:7,0:5:15.05:0,15,492	0/0:27,0:26:75.24:0,75,3324	0/0:20,0:20:57.20:0,57,2848	0/0:31,0:31:81.25:0,81,3421	0/0:16,0:15:39.13:0,39,1022	0/0:21,0:20:57.19:0,57,3369	0/0:32,0:31:84.27:0,84,4045	0/0:15,0:14:36.11:0,36,1912	0/0:27,0:27:75.26:0,75,3957	0/0:22,0:23:63.22:0,63,3089	0/0:26,0:26:66.21:0,66,3145	0/0:26,0:26:47.42:0,47,2028	0/0:18,0:18:51.17:0,51,2473	0/1:7,17:23:52.52:320,0,53	0/0:18,0:18:50.95:0,51,2577	0/0:19,0:18:42.14:0,42,1985	0/0:23,0:23:60.07:0,60,2758	0/0:38,0:37:99:0,105,4819	0/0:17,0:17:42.13:0,42,2016	0/0:13,0:13:39.13:0,39,1908	0/0:31,0:30:81.28:0,81,4419	0/0:19,0:19:26.43:0,26,920	0/1:25,0:25:44.78:45,0,1395	0/1:32,0:32:72.95:73,0,2246	0/0:5,0:5:15.01:0,15,301
chr10	3984405	.	TCTC	T	361.74	PASS	AB=0.958;AC=4;AF=0.071;AN=56;BaseQRankSum=5.517;DP=394;FS=0.000;HRun=0;HaplotypeScore=62.7095;InbreedingCoeff=0.3709;MQ=73.28;MQ0=8;MQRankSum=-0.368;QD=3.89;ReadPosRankSum=-1.700;VQSLOD=0.6582;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:12,8:20:30.10:425,30,0	0/0:6,0:6:12.04:0,12,226	0/0:42,0:14:6.27:0,6,197	0/1:51,0:22:1.88:2,0,178	0/0:9,0:9:24.08:0,24,466	0/0:5,0:5:9.03:0,9,182	0/0:9,0:9:18.06:0,18,347	0/1:20,2:21:41.28:41,0,686	0/0:10,0:10:18.06:0,18,364	0/0:12,0:11:27.09:0,27,476	0/0:6,0:6:9.03:0,9,183	0/0:15,0:15:30.08:0,30,569	0/0:8,0:8:15.05:0,15,304	0/0:12,0:11:30.10:0,30,590	0/0:11,0:11:27.09:0,27,527	0/0:7,0:7:15.05:0,15,300	0/0:25,0:25:23.04:0,23,1141	0/0:3,0:3:6.02:0,6,118	0/0:16,0:16:27.08:0,27,488	0/0:8,0:8:15.01:0,15,264	0/0:25,0:25:48.16:0,48,928	0/0:13,0:13:12.04:0,12,243	0/0:5,0:5:12.04:0,12,244	0/0:7,0:7:12.04:0,12,244	0/0:13,0:13:30.10:0,30,584	0/0:13,0:13:30.10:0,30,610	0/0:9,0:9:9.03:0,9,164	0/0:12,0:12:21.07:0,21,406
chr10	3984472	.	C	CT	799.35	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=-1.273;DP=258;FS=14.967;HRun=0;HaplotypeScore=49.2726;InbreedingCoeff=0.5424;MQ=78.95;MQ0=1;MQRankSum=1.442;QD=6.72;ReadPosRankSum=1.732;VQSLOD=1.9906;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,8:11:12.02:163,12,0	0/0:4,0:4:3.01:0,3,40	0/1:17,0:11:13.27:13,0,85	0/1:11,0:8:1.24:1,0,87	0/0:8,0:8:20.80:0,21,156	0/0:7,0:7:18:0,18,214	0/0:11,0:11:18.88:0,19,198	1/1:12,0:12:13.01:91,13,0	0/0:6,0:6:11.92:0,12,97	0/0:4,0:4:3.47:0,3,29	0/0:9,0:9:14.95:0,15,164	0/0:8,0:8:15.03:0,15,171	0/0:7,1:8:8.96:0,9,69	0/0:8,0:8:14.97:0,15,127	1/1:15,0:15:6.11:89,6,0	0/0:5,0:5:15:0,15,156	1/1:5,13:18:33.08:443,33,0	0/1:6,0:6:22.92:35,0,23	0/0:4,0:4:9:0,9,78	0/0:10,0:10:14.89:0,15,118	0/0:15,0:15:14.98:0,15,125	0/0:11,0:11:18.03:0,18,187	0/0:7,0:7:11.90:0,12,126	0/0:5,0:5:12:0,12,103	1/1:16,0:16:3.62:58,4,0	1/1:11,0:11:3.25:54,3,0	0/0:9,0:9:8.21:0,8,27	1/1:2,0:2:0.48:20,0,0
chr10	3987721	.	CG	C	6322.08	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=17.486;DP=832;FS=4.699;HRun=1;HaplotypeScore=103.5029;InbreedingCoeff=0.9862;MQ=83.93;MQ0=0;MQRankSum=-4.462;QD=36.76;ReadPosRankSum=2.725;VQSLOD=5.0103;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,35:37:99:1344,104,0	0/0:13,0:13:39.13:0,39,616	0/0:29,0:29:80.67:0,81,1284	0/0:19,0:19:51.94:0,52,722	0/0:18,0:18:51.17:0,51,815	0/0:19,0:19:57.19:0,57,910	0/0:45,0:45:99:0,132,2104	0/0:27,0:27:39.54:0,40,336	0/0:34,0:34:99:0,102,1596	0/0:19,0:20:60.20:0,60,942	0/0:21,0:21:63.21:0,63,1002	0/0:48,0:48:99:0,144,2300	0/0:48,0:48:99:0,144,2218	0/0:45,0:45:99:0,135,2102	1/1:0,40:40:99:1480,114,0	0/0:39,0:39:99:0,117,1822	1/1:0,37:37:99:1390,108,0	1/1:0,36:36:99:1263,99,0	0/0:30,0:30:90.26:0,90,1369	0/0:18,0:18:54.18:0,54,861	0/0:58,0:58:99:0,175,2723	0/0:23,0:23:69.24:0,69,1103	0/0:18,0:18:51.17:0,51,813	0/0:36,0:36:99:0,108,1715	1/1:0,22:22:66.21:846,66,0	0/0:30,0:30:79.54:0,80,485	0/0:19,0:17:56.27:0,56,377	0/0:3,0:3:8.89:0,9,59
chr10	3989066	.	C	CAATG	1547.69	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-7.454;DP=882;FS=1.683;HRun=0;HaplotypeScore=135.3522;InbreedingCoeff=0.9992;MQ=83.10;MQ0=0;MQRankSum=-1.965;QD=45.52;ReadPosRankSum=0.741;VQSLOD=3.9119;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,99,1617	0/0:16,0:16:36.11:0,36,582	0/0:22,0:22:42.08:0,42,675	0/0:31,0:31:37.81:0,38,602	0/0:33,0:33:84.27:0,84,1384	0/0:25,0:25:66.23:0,66,1109	0/0:27,0:27:69.22:0,69,1135	0/0:30,0:30:48.14:0,48,757	0/0:39,0:39:93.30:0,93,1537	0/0:44,0:44:99:0,108,1797	0/0:24,0:24:57.17:0,57,907	0/0:33,0:33:78.23:0,78,1259	0/0:33,0:33:75.26:0,75,1260	0/0:30,0:30:69.24:0,69,1154	0/0:46,0:46:99:0,117,1945	0/0:46,0:46:99:0,123,2054	1/1:9,25:34:66.23:1643,66,0	0/0:36,0:36:90.31:0,90,1515	0/0:22,0:22:30.10:0,30,502	0/0:27,0:27:66.23:0,66,1111	0/0:32,0:32:81.26:0,81,1315	0/0:30,0:30:63.22:0,63,1061	0/0:29,0:29:78.27:0,78,1313	0/0:24,0:24:66.23:0,66,1107	0/0:35,0:35:90.31:0,90,1512	0/0:33,0:33:84.29:0,84,1414	0/0:35,0:35:81.28:0,81,1350	0/0:25,0:25:69.20:0,69,1101
chr10	3989428	.	A	AG	1158.07	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-7.383;DP=684;FS=14.041;HRun=2;HaplotypeScore=72.5920;InbreedingCoeff=0.9834;MQ=81.81;MQ0=0;MQRankSum=-2.771;QD=37.36;ReadPosRankSum=0.595;VQSLOD=2.8459;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,30:31:87.29:1253,87,0	0/0:11,0:11:33.09:0,33,396	0/0:21,0:21:60.18:0,60,731	0/0:16,0:16:21.48:0,21,348	0/0:15,0:15:30.09:0,30,371	0/0:19,0:19:57.15:0,57,681	0/0:36,0:36:99:0,105,1275	0/0:28,0:28:78.24:0,78,967	0/0:17,0:17:51.16:0,51,632	0/0:21,0:21:54.16:0,54,659	0/0:13,0:13:21.07:0,21,260	0/0:33,0:33:93.28:0,93,1140	0/0:29,0:29:84.26:0,84,1041	0/0:37,0:37:99:0,108,1326	0/0:31,0:31:90.27:0,90,1103	0/0:26,0:26:78.25:0,78,967	0/0:35,0:35:99:0,102,1264	0/0:25,0:25:72.16:0,72,849	0/0:16,0:16:48.14:0,48,584	0/0:14,0:14:33.10:0,33,407	0/0:64,0:64:99:0,184,2248	0/0:15,0:15:36.11:0,36,446	0/0:10,0:10:18.04:0,18,223	0/0:40,0:40:99:0,114,1398	0/0:22,0:22:54.16:0,54,656	0/0:25,0:25:69.21:0,69,845	0/0:20,0:19:57.18:0,57,707	0/0:14,0:14:42.09:0,42,493
chr10	3990363	.	GC	G	1189.72	PASS	AB=0.909;AC=5;AF=0.089;AN=56;BaseQRankSum=5.466;DP=584;FS=1.764;HRun=9;HaplotypeScore=64.7477;InbreedingCoeff=0.8541;MQ=74.77;MQ0=0;MQRankSum=-0.571;QD=15.65;ReadPosRankSum=1.495;VQSLOD=3.9359;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,30:34:75.04:686,75,0	0/0:9,0:9:27.08:0,27,311	0/0:12,1:13:27.04:0,27,294	0/0:14,1:15:24.79:0,25,217	0/0:18,1:19:26.68:0,27,548	0/0:20,0:20:57.17:0,57,658	0/0:33,1:34:56.74:0,57,877	0/0:21,0:21:37.83:0,38,235	0/0:26,0:26:69.17:0,69,782	0/0:21,0:21:47.50:0,47,497	0/1:9,1:10:0.38:0,0,241	0/0:27,0:27:78.23:0,78,900	0/0:21,1:23:29.67:0,30,574	0/0:22,0:22:60.14:0,60,663	0/0:24,0:24:63.19:0,63,727	0/0:14,0:14:39.12:0,39,450	1/1:6,26:32:40.41:624,40,0	0/0:18,0:18:48.13:0,48,544	0/0:21,0:22:38.95:0,39,429	0/0:11,0:12:23.90:0,24,257	0/0:48,1:49:95.89:0,96,1344	0/0:14,0:14:36.11:0,36,413	0/0:14,1:15:11.92:0,12,379	0/0:26,0:27:75:0,75,805	0/0:16,0:16:45.10:0,45,505	0/0:9,0:20:33.81:0,34,240	0/0:4,0:20:31.81:0,32,181	0/0:0,0:7:17.04:0,17,87
chr10	3990371	.	C	CCT	472.01	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-4.278;DP=583;FS=15.157;HRun=0;HaplotypeScore=88.4839;InbreedingCoeff=0.9607;MQ=74.12;MQ0=0;MQRankSum=2.571;QD=26.22;ReadPosRankSum=-3.738;VQSLOD=2.4962;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:76.86:0,77,525	0/0:11,0:11:33.09:0,33,416	0/0:13,0:13:14.49:0,14,247	0/0:15,0:15:26.02:0,26,232	0/0:23,0:23:66.12:0,66,805	0/0:23,0:23:69.19:0,69,879	0/0:30,0:30:87.15:0,87,1068	1/1:4,13:18:39.08:567,39,0	0/0:24,0:24:69.19:0,69,892	0/0:23,0:23:57.04:0,57,675	0/0:12,0:12:30.02:0,30,353	0/0:32,0:32:90.25:0,90,1166	0/0:24,0:24:60.05:0,60,722	0/0:24,0:24:60.16:0,60,759	0/0:22,0:22:63.20:0,63,845	0/0:14,0:14:42.12:0,42,555	0/0:28,0:28:74.22:0,74,530	0/0:17,0:17:51.15:0,51,667	0/0:17,0:17:47.45:0,47,556	0/0:14,0:14:29.40:0,29,339	0/0:48,0:48:99:0,123,1555	0/0:14,0:14:39.10:0,39,499	0/0:14,0:14:39.08:0,39,496	0/0:26,0:26:68.69:0,69,878	0/0:17,0:17:51.06:0,51,638	0/0:19,0:19:30.58:0,31,212	0/0:21,0:21:28.32:0,28,159	0/0:8,0:8:14.23:0,14,49
chr10	3990602	.	A	AT	1508.44	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=-3.033;DP=544;FS=1.712;HRun=3;HaplotypeScore=68.1586;InbreedingCoeff=0.7574;MQ=70.42;MQ0=5;MQRankSum=2.088;QD=14.79;ReadPosRankSum=-1.811;VQSLOD=2.5170;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,30:38:56.88:827,57,0	0/0:7,0:7:20.97:0,21,207	0/0:46,0:18:9.96:0,10,175	0/1:30,0:8:19.59:20,0,22	0/0:23,0:23:56.98:0,57,542	0/0:14,0:14:29.66:0,30,322	0/0:12,0:12:36.06:0,36,384	1/1:32,2:34:86.68:791,87,0	0/0:14,0:14:39.01:0,39,398	0/0:13,0:13:39.06:0,39,395	0/0:14,0:14:33.83:0,34,318	0/0:15,0:15:32.76:0,33,315	0/0:16,0:16:32.84:0,33,335	0/0:8,0:8:14.97:0,15,128	0/0:13,0:13:23.96:0,24,210	0/0:16,0:16:36.07:0,36,414	0/0:28,0:28:68.19:0,68,554	0/0:24,0:23:47.49:0,47,379	0/0:20,0:20:50.98:0,51,497	0/0:29,0:29:72.84:0,73,656	0/0:11,0:11:27.02:0,27,267	0/0:16,0:16:33.04:0,33,336	0/0:21,0:21:54.09:0,54,590	0/0:10,0:10:21.69:0,22,215	0/0:24,0:24:59.99:0,60,550	0/0:18,0:18:44.62:0,45,451	0/0:20,0:19:51.06:0,51,546	0/0:10,0:10:23.80:0,24,218
chr10	3990605	.	TA	T	586.81	PASS	AB=0.812;AC=10;AF=0.179;AN=56;BaseQRankSum=3.956;DP=574;FS=2.253;HRun=15;HaplotypeScore=72.1020;InbreedingCoeff=0.2980;MQ=67.71;MQ0=7;MQRankSum=1.475;QD=2.92;ReadPosRankSum=3.555;VQSLOD=-0.2266;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:41:82.41:0,82,526	0/0:7,0:7:18:0,18,158	0/1:50,1:15:17.38:17,0,47	0/1:33,0:9:4.02:22,0,4	0/0:21,1:22:16.15:0,16,322	0/0:14,1:17:23.20:0,23,269	0/0:11,1:12:7.73:0,8,192	0/0:7,0:38:54.04:0,54,339	0/0:15,0:15:14.90:0,15,232	0/1:15,2:17:11.52:12,0,157	0/0:15,0:17:8.56:0,9,173	0/0:14,0:15:27.16:0,27,208	0/0:14,1:17:19.92:0,20,243	0/0:9,0:9:17.41:0,17,129	1/1:2,6:12:5.13:79,5,0	0/0:15,0:16:38.83:0,39,328	1/1:6,18:30:32.31:262,32,0	0/1:6,15:22:7.30:148,0,7	0/0:20,0:20:20.22:0,20,208	0/0:28,0:30:26.46:0,26,317	0/1:8,2:10:14.56:15,0,129	0/0:14,0:15:18.31:0,18,172	0/0:20,2:22:47.19:0,47,398	0/0:7,0:10:23.68:0,24,186	0/1:7,14:23:10.18:181,0,10	0/0:15,1:18:16.18:0,16,253	0/0:21,0:19:41.97:0,42,363	0/0:10,0:11:14.77:0,15,104
chr10	3990978	.	T	TC	1631.27	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-8.173;DP=765;FS=0.628;HRun=0;HaplotypeScore=74.6871;InbreedingCoeff=0.9995;MQ=78.61;MQ0=0;MQRankSum=-5.048;QD=39.79;ReadPosRankSum=0.990;VQSLOD=4.1652;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,41:41:99:1726,108,0	0/0:13,0:13:39.13:0,39,542	0/0:18,0:18:42.18:0,42,668	0/0:17,0:17:38.89:0,39,484	0/0:21,0:21:60.19:0,60,823	0/0:13,0:13:39.13:0,39,545	0/0:41,0:41:99:0,123,1720	0/0:33,0:33:90.27:0,90,1208	0/0:27,0:27:81.26:0,81,1113	0/0:29,0:29:87.25:0,87,1155	0/0:21,0:21:63.18:0,63,852	0/0:37,0:37:99:0,108,1493	0/0:37,0:37:99:0,111,1552	0/0:42,0:42:99:0,123,1719	0/0:35,0:35:99:0,105,1452	0/0:28,0:28:84.28:0,84,1174	0/0:29,0:29:87.25:0,87,1180	0/0:22,0:22:63.18:0,63,860	0/0:27,0:27:78.22:0,78,1068	0/0:25,0:25:75.24:0,75,1022	0/0:41,0:41:99:0,114,1593	0/0:27,0:27:78.26:0,78,1090	0/0:20,0:20:57.18:0,57,781	0/0:30,0:30:90.26:0,90,1230	0/0:24,0:24:72.24:0,72,998	0/0:36,0:36:99:0,108,1493	0/0:20,0:20:60.20:0,60,838	0/0:11,0:11:33.11:0,33,461
chr10	3991077	.	AG	A	1814.05	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=8.028;DP=780;FS=7.123;HRun=2;HaplotypeScore=75.5834;InbreedingCoeff=0.8697;MQ=79.14;MQ0=0;MQRankSum=-1.013;QD=33.59;ReadPosRankSum=1.476;VQSLOD=3.6666;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,54:54:99:1909,147,0	0/0:10,0:10:27.08:0,27,386	0/0:20,0:20:40.66:0,41,631	0/0:16,0:16:4.21:0,4,380	0/0:16,0:16:33.11:0,33,494	0/0:24,0:24:72.23:0,72,1055	0/0:39,0:39:99:0,111,1623	0/0:32,0:32:93.31:0,93,1391	0/0:25,0:25:75.24:0,75,1104	0/0:24,0:24:66.22:0,66,986	0/0:14,0:14:36.12:0,36,539	0/0:39,0:39:99:0,114,1688	0/0:38,0:38:99:0,114,1687	0/0:40,0:40:99:0,117,1704	0/0:34,0:34:99:0,102,1507	0/0:24,0:24:72.24:0,72,1078	0/0:39,0:39:99:0,111,1663	0/0:20,0:20:60.20:0,60,897	0/0:25,0:25:75.23:0,75,1084	0/0:21,0:21:48.15:0,48,697	0/0:57,0:57:99:0,166,2472	0/0:16,0:16:42.02:0,42,620	0/0:22,0:22:66.18:0,66,958	0/0:45,0:45:99:0,135,2018	0/0:14,0:14:42.14:0,42,629	0/0:37,0:37:99:0,105,1531	0/0:27,0:27:78.25:0,78,1146	0/0:8,0:8:21.07:0,21,313
chr10	3992458	.	TA	T	856.79	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.515;DP=628;FS=0.000;HRun=10;HaplotypeScore=64.6968;InbreedingCoeff=0.8752;MQ=67.43;MQ0=0;MQRankSum=-3.683;QD=19.04;ReadPosRankSum=1.174;VQSLOD=4.4457;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,39:45:99:952,111,0	0/0:10,0:10:30.08:0,30,332	0/0:20,1:20:5.13:0,5,372	0/0:14,0:14:14.97:0,15,165	0/0:31,1:32:64.16:0,64,912	0/0:16,0:16:39.09:0,39,424	0/0:17,1:18:25.09:0,25,505	0/0:26,0:25:54.13:0,54,584	0/0:20,0:20:51.12:0,51,554	0/0:35,0:35:93.25:0,93,1022	0/0:25,0:25:69.19:0,69,762	0/0:17,0:17:48.13:0,48,531	0/0:22,1:23:40.09:0,40,657	0/0:16,0:16:48.12:0,48,524	0/0:19,0:19:51.14:0,51,564	0/0:29,0:29:81.20:0,81,881	0/0:25,0:25:57.15:0,57,630	0/0:20,0:20:54.14:0,54,595	0/0:21,0:21:60.16:0,60,663	0/0:24,0:24:68.21:0,68,734	0/0:16,0:16:42.11:0,42,465	0/0:21,0:21:54.13:0,54,589	0/0:15,0:15:41.48:0,41,440	0/0:11,0:11:27.07:0,27,299	0/0:25,0:25:57.15:0,57,623	0/0:24,0:24:45.48:0,45,685	0/0:42,0:42:99:0,117,1285	0/0:18,0:18:54.11:0,54,575
chr10	3994425	.	TTCTC	T	324.78	PASS	AB=0.978;AC=19;AF=0.413;AN=46;BaseQRankSum=1.159;DP=469;FS=3.260;HRun=0;HaplotypeScore=85.7088;InbreedingCoeff=0.3486;MQ=69.14;MQ0=11;MQRankSum=2.066;QD=1.68;ReadPosRankSum=2.588;VQSLOD=1.5349;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:17:9.02:111,9,0	./.	./.	./.	1/1:11,0:11:3:26,3,0	0/0:15,0:15:8.92:0,9,123	0/0:16,0:16:7.48:0,7,81	./.	0/1:11,0:11:16.94:25,0,17	0/0:16,0:16:9.02:0,9,123	0/1:10,0:10:0:0,0,0	0/1:12,0:12:36.91:37,0,131	1/1:12,6:18:2.57:45,3,0	0/0:17,0:16:12.03:0,12,183	0/1:19,0:19:0:0,0,0	0/0:11,0:11:3:0,3,25	0/1:14,1:15:7.94:40,0,8	1/1:16,0:20:3:28,3,0	0/0:22,0:22:7.83:0,8,62	0/0:6,0:6:3.01:0,3,70	0/0:21,0:21:9.03:0,9,161	1/1:17,0:16:2.90:16,3,0	0/0:19,0:19:5.89:0,6,39	0/0:23,0:23:27.05:0,27,372	./.	1/1:24,3:26:8.28:90,8,0	1/1:15,0:15:3.01:46,3,0	0/0:8,0:8:3.63:0,4,10
chr10	3994684	.	T	TC	2089.40	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-11.179;DP=763;FS=6.070;HRun=3;HaplotypeScore=71.8812;InbreedingCoeff=0.9700;MQ=82.43;MQ0=0;MQRankSum=-4.384;QD=36.02;ReadPosRankSum=3.599;VQSLOD=4.3629;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,55:58:99:2184,157,0	0/0:11,0:11:33.08:0,33,376	0/0:19,0:19:51.01:0,51,560	0/0:28,0:27:63.63:0,64,729	0/0:24,0:24:66.20:0,66,791	0/0:22,0:22:63.18:0,63,744	0/0:34,0:34:99:0,102,1200	0/0:35,0:35:99:0,102,1162	0/0:26,0:26:78.17:0,78,896	0/0:24,0:24:63.19:0,63,756	0/0:15,0:15:39.12:0,39,468	0/0:26,0:26:69.21:0,69,828	0/0:20,0:20:57.17:0,57,684	0/0:25,0:25:69.20:0,69,817	0/0:30,0:30:84.22:0,84,983	0/0:19,0:19:57.17:0,57,684	0/0:37,0:37:99:0,111,1293	0/0:29,0:29:81.21:0,81,945	0/0:28,0:27:81.25:0,81,972	0/0:22,0:22:63.18:0,63,737	0/0:42,0:42:99:0,117,1367	0/0:30,0:30:84.23:0,84,985	0/0:18,0:18:51.15:0,51,607	0/0:54,0:54:99:0,153,1808	0/0:26,0:26:72.22:0,72,863	0/0:29,0:29:81.24:0,81,962	0/0:27,0:27:78.20:0,78,899	0/0:5,0:5:12.04:0,12,144
chr10	3997232	.	C	CTG	1846.87	PASS	AB=0.917;AC=21;AF=0.404;AN=52;BaseQRankSum=-0.541;DP=512;FS=5.569;HRun=0;HaplotypeScore=79.8854;InbreedingCoeff=0.3648;MQ=64.78;MQ0=5;MQRankSum=0.111;QD=6.69;ReadPosRankSum=-0.955;VQSLOD=1.9949;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:20:2.99:23,3,0	0/0:7,0:7:15.04:0,15,167	./.	./.	0/0:17,0:17:29.86:0,30,298	0/1:16,1:17:21.32:21,0,210	0/1:24,1:26:6.45:6,0,342	1/1:23,0:23:11.95:109,12,0	0/0:14,0:14:30.08:0,30,334	0/0:19,0:20:23.61:0,24,213	0/0:8,0:8:12.03:0,12,133	0/0:26,0:27:26.87:0,27,263	0/0:20,0:21:35.82:0,36,362	0/1:11,1:12:27.33:27,0,149	0/1:15,3:17:42.45:235,0,42	0/1:12,1:13:30.38:30,0,118	1/1:4,0:16:8.04:62,8,0	0/1:27,7:34:93.06:561,0,93	0/0:16,0:16:11.84:0,12,97	0/0:11,0:10:15.04:0,15,167	0/1:35,1:38:12.65:13,0,414	0/0:13,0:13:15.03:0,15,158	0/0:9,0:9:18.05:0,18,200	0/0:21,0:24:35.76:0,36,362	1/1:9,2:10:9.03:125,9,0	1/1:11,11:24:24.05:417,24,0	1/1:9,4:14:24.05:309,24,0	1/1:5,3:8:6.02:91,6,0
chr10	3997269	.	TGC	T	1034.74	PASS	AB=0.954;AC=11;AF=0.196;AN=56;BaseQRankSum=5.764;DP=468;FS=6.878;HRun=0;HaplotypeScore=76.6914;InbreedingCoeff=0.6236;MQ=64.93;MQ0=9;MQRankSum=-0.682;QD=7.66;ReadPosRankSum=1.226;VQSLOD=2.1929;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:12,6:17:15.05:188,15,0	0/0:6,0:6:9.03:0,9,137	0/0:16,0:8:4.94:0,5,80	0/1:22,0:6:1.73:2,0,27	0/0:18,0:18:32.98:0,33,484	0/0:11,0:11:33.10:0,33,509	0/0:30,0:30:70.62:0,71,1178	0/0:14,0:14:27.09:0,27,447	0/0:17,0:17:45.15:0,45,721	0/0:23,0:23:21.54:0,22,629	0/0:5,0:5:8.94:0,9,115	0/0:15,0:15:36.11:0,36,556	0/1:22,0:21:1.22:1,0,627	0/0:12,0:12:21.54:0,22,349	1/1:13,8:20:35.92:397,36,0	0/0:14,0:14:0.86:0,1,352	0/0:12,0:12:18.04:0,18,259	1/1:21,6:28:18.71:491,19,0	0/1:14,1:15:8.86:9,0,444	0/0:9,0:8:11.99:0,12,165	0/0:37,0:37:54.33:0,54,896	0/0:11,0:11:24.08:0,24,383	0/0:13,0:13:33.11:0,33,544	0/0:28,0:28:57.09:0,57,827	1/1:5,2:7:9.02:102,9,0	0/0:19,0:18:42.07:0,42,647	0/0:15,0:15:33.08:0,33,506	0/0:7,0:6:9.03:0,9,149
chr10	3997293	.	TGAGA	T	54.77	PASS	AB=0.963;AC=9;AF=0.237;AN=38;BaseQRankSum=2.855;DP=445;FS=12.022;HRun=0;HaplotypeScore=88.9959;InbreedingCoeff=0.3314;MQ=63.63;MQ0=10;MQRankSum=-0.417;QD=0.54;ReadPosRankSum=0.351;VQSLOD=0.7847;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:15:0.47:0,0,1	./.	./.	./.	0/0:13,0:13:6.02:0,6,97	0/0:16,0:16:3.48:0,3,39	0/1:25,1:25:39.56:40,0,64	./.	0/0:16,0:16:6.02:0,6,78	1/1:15,4:19:4.26:63,4,0	./.	0/0:18,0:19:17.80:0,18,269	0/0:18,0:18:15.02:0,15,211	0/0:11,0:11:6.02:0,6,85	1/1:17,0:18:0.98:3,1,0	0/0:17,0:16:12.03:0,12,153	0/0:20,0:19:3.07:0,3,11	1/1:19,0:19:3:28,3,0	0/0:15,0:15:3:0,3,27	0/0:6,0:6:3.01:0,3,43	0/0:25,0:25:3.01:0,3,40	./.	0/0:15,0:15:6.02:0,6,107	0/0:19,0:22:20.27:0,20,228	./.	./.	1/1:17,0:18:2.74:28,3,0	./.
chr10	3997349	.	AGCAC	A	165.31	PASS	AB=1.000;AC=5;AF=0.093;AN=54;BaseQRankSum=5.752;DP=424;FS=7.831;HRun=0;HaplotypeScore=78.2901;InbreedingCoeff=0.7292;MQ=76.15;MQ0=13;MQRankSum=-2.021;QD=2.23;ReadPosRankSum=-2.148;VQSLOD=0.2228;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:11:8.20:44,8,0	0/0:4,0:4:9.03:0,9,209	0/0:25,0:16:37.55:0,38,818	0/1:45,0:23:4.56:5,0,475	0/0:12,0:12:24.08:0,24,468	0/0:11,0:10:26.96:0,27,630	0/0:18,0:18:42.13:0,42,907	0/0:17,0:17:43.39:0,43,455	0/0:11,0:11:30.09:0,30,638	0/0:8,0:8:10.35:0,10,223	0/0:16,0:16:39.13:0,39,884	0/0:21,0:21:54.10:0,54,1157	0/0:15,0:15:35.12:0,35,747	0/0:12,0:12:30.10:0,30,631	0/0:17,0:14:24.08:0,24,534	0/0:13,0:13:30.10:0,30,721	1/1:3,15:18:14.94:229,15,0	0/0:25,0:25:71.92:0,72,1497	0/0:13,0:13:32.57:0,33,751	0/0:7,0:7:14.84:0,15,353	0/0:25,0:24:57.19:0,57,1292	0/0:10,0:9:18.06:0,18,421	0/0:12,0:12:27.09:0,27,626	0/0:27,0:27:60.16:0,60,1102	0/0:9,0:9:21.07:0,21,492	0/0:13,0:13:34.96:0,35,337	0/0:8,0:8:14.91:0,15,157	./.
chr10	3997357	.	C	CGAG	173.32	PASS	AC=2;AF=0.037;AN=54;BaseQRankSum=3.913;DP=431;FS=3.890;HRun=0;HaplotypeScore=75.3679;InbreedingCoeff=0.8567;MQ=89.29;MQ0=9;MQRankSum=-2.584;QD=10.20;ReadPosRankSum=-2.994;VQSLOD=2.5205;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,14:17:15.05:261,15,0	0/0:4,0:4:9.03:0,9,168	0/0:35,0:26:65.65:0,66,1151	0/0:49,0:27:50.20:0,50,785	0/0:12,0:12:33.11:0,33,589	0/0:11,0:11:29.97:0,30,546	0/0:18,0:18:54.04:0,54,843	0/0:18,0:18:51.17:0,51,910	0/0:10,0:10:30.10:0,30,558	0/0:8,0:8:21.07:0,21,390	0/0:17,0:17:48.16:0,48,855	0/0:19,0:19:54.17:0,54,975	0/0:13,0:13:39.13:0,39,714	0/0:11,0:11:33.11:0,33,614	0/0:13,0:12:26.94:0,27,467	0/0:10,0:10:30.10:0,30,559	0/0:15,0:15:9.03:0,9,119	0/0:27,0:27:78.23:0,78,1390	0/0:12,0:12:36.12:0,36,647	0/0:5,0:5:15.05:0,15,280	0/0:27,0:27:78.22:0,78,1370	0/0:9,0:9:21.07:0,21,379	0/0:12,0:12:30.10:0,30,544	0/0:23,0:23:54.14:0,54,937	0/0:11,0:11:30.10:0,30,519	0/0:16,0:16:45.06:0,45,757	0/0:9,0:9:27.09:0,27,483	./.
chr10	3997681	.	CA	C	2120.05	PASS	AB=0.913;AC=11;AF=0.196;AN=56;BaseQRankSum=10.226;DP=626;FS=0.839;HRun=10;HaplotypeScore=65.3853;InbreedingCoeff=0.8613;MQ=63.86;MQ0=13;MQRankSum=1.508;QD=14.23;ReadPosRankSum=0.483;VQSLOD=3.7678;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:34:90.23:0,90,985	0/0:7,0:7:18.05:0,18,199	0/0:17,0:11:27.84:0,28,274	0/0:12,1:10:4.44:0,4,156	0/0:24,1:25:40.11:0,40,662	0/0:20,0:20:51.11:0,51,552	0/0:20,0:20:56.89:0,57,609	1/1:12,19:29:56.90:487,57,0	0/1:19,2:21:1.01:1,0,424	0/0:26,0:27:69.01:0,69,728	0/0:15,0:15:45.09:0,45,474	0/0:15,1:17:24.91:0,25,466	0/0:20,0:18:39.09:0,39,422	0/0:27,0:27:72.19:0,72,792	0/0:34,0:34:87.22:0,87,947	0/0:20,0:21:56.96:0,57,597	1/1:6,28:33:41.82:592,42,0	0/0:31,0:32:84.14:0,84,889	0/0:27,0:26:66.18:0,66,729	0/0:19,1:19:28.09:0,28,538	0/0:22,0:21:51.09:0,51,550	0/0:18,1:18:22.08:0,22,470	0/0:19,0:19:48.12:0,48,519	0/0:23,0:23:41.25:0,41,660	0/0:17,0:17:45.12:0,45,498	1/1:7,32:39:35.60:764,36,0	1/1:2,20:22:47.99:417,48,0	1/1:1,1:1:3:26,3,0
chr10	3998086	.	TC	T	1709.34	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.534;DP=812;FS=0.000;HRun=1;HaplotypeScore=75.9781;InbreedingCoeff=0.9940;MQ=83.46;MQ0=0;MQRankSum=-3.914;QD=37.16;ReadPosRankSum=-0.534;VQSLOD=3.6676;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,46:46:99:1804,129,0	0/0:9,0:9:24.07:0,24,380	0/0:21,0:21:62.93:0,63,944	0/0:25,0:25:75.26:0,75,1190	0/0:33,0:33:93.32:0,93,1472	0/0:21,0:20:63.21:0,63,1002	0/0:33,0:33:99:0,99,1559	0/0:29,0:29:84.26:0,84,1281	0/0:37,0:37:99:0,111,1758	0/0:34,0:34:99:0,99,1520	0/0:18,0:18:54.17:0,54,838	0/0:29,0:29:87.30:0,87,1388	0/0:28,0:28:84.27:0,84,1310	0/0:32,0:32:96.33:0,96,1530	0/0:41,0:41:99:0,123,1913	0/0:29,0:29:87.30:0,87,1391	0/0:35,0:34:99:0,105,1677	0/0:30,0:30:90.25:0,90,1386	0/0:22,0:22:63.20:0,63,966	0/0:40,0:40:99:0,117,1847	0/0:38,0:38:99:0,114,1817	0/0:34,0:34:99:0,99,1571	0/0:23,0:23:69.24:0,69,1103	0/0:21,0:21:63.21:0,63,1007	0/0:29,0:29:84.29:0,84,1343	0/0:35,0:35:99:0,105,1634	0/0:32,0:32:96.29:0,96,1505	0/0:8,0:7:21.07:0,21,336
chr10	3999009	.	GATCT	G	1495.14	PASS	AB=0.957;AC=25;AF=0.500;AN=50;BaseQRankSum=7.185;DP=644;FS=2.282;HRun=0;HaplotypeScore=118.1422;InbreedingCoeff=0.6616;MQ=74.21;MQ0=6;MQRankSum=-1.746;QD=5.05;ReadPosRankSum=2.526;VQSLOD=2.5175;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:44:21.07:0,21,366	1/1:11,8:19:17.97:269,18,0	./.	./.	1/1:16,0:25:0.45:1,0,0	0/0:20,0:20:24.08:0,24,510	0/0:20,0:20:9.03:0,9,151	./.	0/0:23,0:23:21.04:0,21,336	0/0:22,0:26:18.06:0,18,315	0/1:26,1:27:2.82:3,0,795	0/0:28,0:28:36.12:0,36,688	0/0:25,0:25:39.12:0,39,801	0/0:22,0:22:24.08:0,24,470	1/1:15,0:20:12.01:112,12,0	0/1:21,1:22:11.86:12,0,620	1/1:10,0:12:3:28,3,0	1/1:20,0:24:6.01:56,6,0	0/1:18,1:16:35.94:36,0,115	1/1:10,9:19:21.07:307,21,0	0/0:26,0:26:9.01:0,9,138	0/0:27,0:27:38.92:0,39,742	0/0:18,0:18:15.04:0,15,301	1/1:14,5:19:9.03:134,9,0	1/1:13,0:21:9.01:84,9,0	1/1:21,8:29:21.07:310,21,0	1/1:12,3:15:15.03:195,15,0	1/1:22,3:24:9.03:135,9,0
chr10	4001915	.	T	TA	2845.71	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=6.822;DP=584;FS=7.848;HRun=10;HaplotypeScore=72.3451;InbreedingCoeff=0.9020;MQ=73.29;MQ0=1;MQRankSum=-5.456;QD=20.04;ReadPosRankSum=-2.416;VQSLOD=3.5219;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:4,20:24:51.13:544,51,0	0/0:5,0:5:8.98:0,9,74	0/0:30,0:21:21.63:0,22,220	0/0:20,0:17:12.75:0,13,133	0/0:26,0:28:65.36:0,65,515	0/0:34,0:34:88.52:0,89,704	0/0:11,0:11:29.96:0,30,246	1/1:11,0:25:50.92:266,51,0	0/0:15,0:15:41.95:0,42,345	0/0:24,2:27:17.62:0,18,466	0/0:19,0:19:50.88:0,51,408	0/0:17,0:18:46.98:0,47,375	0/0:9,0:11:19.99:0,20,154	0/0:18,1:19:16.16:0,16,334	0/0:29,0:29:74.86:0,75,607	0/0:22,0:22:62.91:0,63,517	1/1:6,23:29:38.52:614,39,0	0/0:22,0:22:50.88:0,51,418	0/0:26,0:26:65.87:0,66,535	0/0:28,0:28:74.76:0,75,598	0/0:10,0:10:3.76:0,4,174	0/0:13,0:13:26.95:0,27,218	0/0:19,0:19:29.89:0,30,391	0/0:11,1:12:0.97:0,1,214	0/0:19,0:19:44.91:0,45,362	1/1:9,18:27:19.88:610,20,0	1/1:7,15:21:63.13:652,63,0	1/1:5,10:15:33.07:344,33,0
chr10	4001973	.	G	GT	2505.85	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=11.337;DP=567;FS=2.749;HRun=4;HaplotypeScore=84.8048;InbreedingCoeff=0.8084;MQ=74.58;MQ0=0;MQRankSum=-2.683;QD=22.99;ReadPosRankSum=-0.929;VQSLOD=2.4497;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:51.11:0,51,562	0/0:7,0:7:21.03:0,21,225	0/0:15,0:15:31.91:0,32,308	0/0:11,0:11:13.25:0,13,147	0/0:19,0:19:54.11:0,54,580	0/0:27,0:27:66.73:0,67,767	0/0:11,0:11:30.07:0,30,329	0/1:36,0:36:40.74:79,0,41	0/0:21,0:21:60.15:0,60,664	0/0:26,0:26:66.09:0,66,693	0/0:26,0:26:66.15:0,66,724	0/0:18,0:18:48.10:0,48,524	0/0:14,0:14:39.10:0,39,432	0/0:12,0:12:33.06:0,33,352	0/0:20,0:20:60.13:0,60,653	0/0:23,0:23:60.15:0,60,661	0/0:24,0:24:7.51:0,8,21	0/0:20,0:20:52.90:0,53,555	0/0:23,0:23:66.12:0,66,710	0/0:21,0:21:52.28:0,52,601	0/0:16,0:16:48.10:0,48,522	0/0:19,0:19:57.12:0,57,615	0/0:21,0:21:56.93:0,57,573	0/0:17,0:17:51.13:0,51,567	0/0:26,0:26:78.21:0,78,873	1/1:5,25:30:58.88:998,59,0	1/1:1,23:24:69.22:918,69,0	1/1:2,17:19:51.13:658,51,0
chr10	4002239	.	GCA	G	844.04	PASS	AB=0.926;AC=22;AF=0.407;AN=54;BaseQRankSum=4.245;DP=803;FS=0.523;HRun=0;HaplotypeScore=133.8369;InbreedingCoeff=-0.1296;MQ=55.58;MQ0=22;MQRankSum=-1.438;QD=1.64;ReadPosRankSum=1.951;VQSLOD=2.3750;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:43:5.68:28,6,0	0/0:5,0:5:8.98:0,9,89	./.	0/0:54,0:16:0:0,0,0	0/1:26,3:29:3.08:3,0,311	0/1:16,0:16:33.87:34,0,186	0/1:26,0:25:27.25:27,0,248	0/0:32,0:31:2.92:0,3,17	0/0:27,0:27:29.41:0,29,366	0/1:33,1:33:45.97:46,0,402	0/1:17,5:20:37.97:38,0,221	0/1:32,1:34:41.70:42,0,377	0/1:20,3:23:79.85:80,0,381	0/0:31,1:32:8.96:0,9,378	0/1:23,0:25:45.82:46,0,263	0/0:18,7:26:27.45:0,27,303	0/1:24,0:23:42.35:44,0,42	0/0:26,0:26:6.26:0,6,441	1/1:15,0:13:1.46:12,1,0	0/1:21,2:23:9.14:9,0,212	0/1:80,2:83:98.16:98,0,899	0/0:22,2:24:5.56:0,6,325	1/1:10,6:16:5.75:66,6,0	0/1:22,20:44:2.30:140,0,2	1/1:10,5:16:25.67:234,26,0	0/1:31,0:30:4.56:44,0,5	0/0:16,0:16:0:0,0,1	0/1:9,0:9:4.13:4,0,8
chr10	4002269	.	ACACACACACGCG	A	1918.90	PASS	AB=1.000;AC=8;AF=0.143;AN=56;BaseQRankSum=4.246;DP=772;FS=11.431;HRun=0;HaplotypeScore=255.1224;InbreedingCoeff=0.6273;MQ=51.81;MQ0=31;MQRankSum=-5.304;QD=19.19;ReadPosRankSum=-0.612;VQSLOD=0.7502;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:31,0:31:99:103,0,326	0/0:9,0:9:27.08:0,27,695	0/0:9,0:1:3.01:0,3,42	0/0:21,0:2:5.20:0,5,29	0/0:24,0:24:51.17:0,51,1922	0/0:22,0:21:44.91:0,45,1597	0/0:35,0:34:78.40:0,78,2161	0/1:13,0:11:9.82:11,0,10	0/0:32,0:32:75.18:0,75,2333	0/0:45,0:43:99:0,123,3163	0/0:25,0:23:57.19:0,57,2061	0/0:34,0:34:80.49:0,80,2799	0/0:28,0:28:81.26:0,81,2875	0/0:31,0:31:78.25:0,78,2587	0/0:25,0:23:50.91:0,51,1788	0/0:29,0:29:57.14:0,57,1863	1/1:15,0:19:19.86:537,20,0	0/0:29,0:29:82.01:0,82,2792	0/0:13,0:8:22.28:0,22,371	0/0:22,0:22:54.17:0,54,1757	0/0:103,0:102:99:0,225,7495	0/0:29,0:29:81.27:0,81,2559	0/0:21,0:19:30.10:0,30,911	0/0:47,0:47:81.13:0,81,1698	0/0:22,0:22:54.18:0,54,1430	1/1:24,3:25:59.92:1137,60,0	0/0:2,15:17:1.44:0,1,3	1/1:9,0:8:8.53:277,9,0
chr10	4002295	.	G	GCA	758.07	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=-0.377;DP=896;FS=0.000;HRun=0;HaplotypeScore=169.1963;InbreedingCoeff=0.6170;MQ=55.93;MQ0=14;MQRankSum=-0.213;QD=14.58;ReadPosRankSum=-2.635;VQSLOD=2.5521;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:53.77:0,54,686	0/0:15,0:15:42.13:0,42,535	0/0:16,0:7:21.05:0,21,246	0/1:29,0:6:9.22:9,0,33	0/0:30,0:30:70.45:0,70,872	0/0:23,0:22:37.36:0,37,461	0/0:46,0:46:99:0,111,1412	1/1:5,18:23:51.17:851,51,0	0/0:37,0:37:81.26:0,81,1025	0/0:43,0:43:99:0,108,1355	0/0:27,0:26:66.21:0,66,837	0/0:51,0:51:99:0,120,1498	0/0:36,0:36:82.87:0,83,1052	0/0:39,0:39:99:0,102,1295	0/0:25,0:24:44.89:0,45,553	0/0:34,0:34:77.26:0,77,989	0/0:18,0:18:30.05:0,30,363	0/0:29,0:29:71.41:0,71,864	0/0:20,0:19:45.51:0,46,536	0/0:19,0:19:45.12:0,45,546	0/0:120,0:120:99:0,282,3488	0/0:21,0:21:51.11:0,51,628	0/0:20,0:20:51.15:0,51,636	0/0:53,0:53:99:0,102,1281	0/0:22,0:22:54.17:0,54,683	0/0:33,0:33:70.61:0,71,1046	0/0:19,0:19:5.99:0,6,76	0/0:6,0:5:15.05:0,15,188
chr10	4002331	.	G	GCA	311.11	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=5.377;DP=1016;FS=3.572;HRun=0;HaplotypeScore=170.7959;InbreedingCoeff=0.6784;MQ=55.98;MQ0=22;MQRankSum=-2.604;QD=5.36;ReadPosRankSum=-2.465;VQSLOD=2.4290;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:98.80:0,99,1227	0/0:18,0:18:51.14:0,51,618	0/1:44,0:16:4.41:4,0,229	0/0:53,0:15:12.15:0,12,212	0/0:26,0:26:75.23:0,75,933	0/0:25,0:25:55.39:0,55,651	0/0:42,0:43:91.83:0,92,1140	0/0:42,0:42:64.29:0,64,1064	0/0:44,0:44:99:0,105,1292	0/0:46,0:46:99:0,123,1475	0/0:23,0:22:48.15:0,48,601	0/0:46,0:46:99:0,126,1572	0/0:34,0:34:75.29:0,75,1121	0/0:53,0:53:99:0,147,1748	0/0:37,0:35:77.90:0,78,979	0/0:37,0:37:95.79:0,96,1161	1/1:3,10:13:18.60:401,19,0	0/0:36,0:36:93.18:0,93,1112	0/0:14,0:15:35.50:0,36,351	0/0:21,0:21:45.14:0,45,567	0/0:124,0:124:99:0,316,3887	0/0:25,0:25:72.23:0,72,904	0/0:19,0:19:39.05:0,39,492	0/0:53,0:53:99:0,129,1569	0/0:24,0:25:66:0,66,789	0/0:40,0:40:99:0,102,1244	0/0:15,0:15:15.05:0,15,189	0/0:9,0:9:14.96:0,15,168
chr10	4002426	.	TGC	T	371.83	PASS	AB=0.929;AC=4;AF=0.071;AN=56;BaseQRankSum=8.353;DP=1020;FS=10.325;HRun=0;HaplotypeScore=168.6902;InbreedingCoeff=0.5413;MQ=54.32;MQ0=5;MQRankSum=-7.954;QD=9.30;ReadPosRankSum=-0.782;VQSLOD=2.3701;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:35:54.07:0,54,1028	0/0:13,0:13:39.13:0,39,776	0/0:23,1:7:20.89:0,21,340	0/0:44,0:19:57.16:0,57,1011	0/0:24,0:24:72.25:0,72,1446	0/0:22,0:22:60.09:0,60,1152	0/0:47,0:46:99:0,132,2586	1/1:7,11:16:24.11:444,24,0	0/0:37,0:37:99:0,99,1985	0/0:44,0:44:99:0,132,2586	0/0:13,0:13:33.11:0,33,656	0/0:51,0:51:99:0,132,2652	0/0:32,0:32:93.32:0,93,1824	0/0:56,0:56:99:0,159,3092	0/0:41,0:41:95.71:0,96,1899	0/0:37,0:37:99:0,105,2024	0/1:5,1:6:1.70:15,0,2	0/0:38,1:39:73.45:0,73,2236	0/0:24,0:22:60.21:0,60,1171	0/0:19,0:19:57.20:0,57,1149	0/0:172,0:172:99:0,499,9800	0/0:30,0:30:90.30:0,90,1779	0/0:22,0:22:57.18:0,57,1121	0/0:69,0:69:99:0,180,3638	0/0:21,0:21:63.20:0,63,1243	0/0:43,1:44:6.38:0,6,927	0/1:16,0:16:25.84:26,0,42	0/0:19,0:19:5.28:0,5,346
chr10	4002431	.	GCACACATGCACA	G	1878	PASS	AB=1.000;AC=8;AF=0.148;AN=54;BaseQRankSum=10.074;DP=1030;FS=6.929;HRun=0;HaplotypeScore=352.6735;InbreedingCoeff=0.6356;MQ=54.58;MQ0=8;MQRankSum=-2.698;QD=17.07;ReadPosRankSum=-2.736;VQSLOD=0.6173;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:45.09:0,45,1498	0/0:13,0:13:36.09:0,36,1244	./.	0/0:48,0:24:56.87:0,57,1070	0/0:25,0:25:69.20:0,69,3015	0/0:22,0:22:51.11:0,51,2218	0/0:45,0:44:99:0,120,3988	0/1:25,0:24:99:108,0,316	0/0:36,0:36:93.24:0,93,4120	0/0:45,0:45:99:0,114,4296	0/0:14,0:14:30.10:0,30,1259	0/0:50,0:50:99:0,120,4916	0/0:30,0:30:84.27:0,84,3402	0/0:56,0:56:99:0,135,5532	0/0:41,0:41:99:0,103,4122	0/0:36,0:36:96.24:0,96,3446	0/1:6,0:6:27.73:52,0,28	0/0:39,0:39:99:0,99,3879	0/0:20,0:18:45.08:0,45,1355	0/0:21,0:21:63.14:0,63,2471	0/0:168,0:168:99:0,430,16670	0/0:33,0:33:90.19:0,90,3615	0/0:21,0:21:51.13:0,51,1916	0/0:72,0:72:99:0,175,7384	0/0:23,0:23:63.17:0,63,2510	1/1:9,33:42:55.44:1277,55,0	1/1:2,14:16:2.60:93,3,0	1/1:5,14:19:15.05:489,15,0
chr10	4002472	.	T	TAC	545.53	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.841;DP=1154;FS=4.812;HRun=0;HaplotypeScore=179.5670;InbreedingCoeff=0.7452;MQ=52.98;MQ0=20;MQRankSum=0.132;QD=15.15;ReadPosRankSum=0.572;VQSLOD=3.5089;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,32:36:36.59:640,37,0	0/0:17,0:17:45.14:0,45,601	0/0:52,0:6:0.40:0,0,188	0/0:60,0:17:36.08:0,36,454	0/0:27,0:27:81.25:0,81,1089	0/0:29,0:29:59.29:0,59,842	0/0:51,0:51:99:0,135,1829	0/0:35,0:30:63.47:0,63,741	0/0:42,0:42:99:0,111,1519	0/0:47,0:46:99:0,129,1703	0/0:18,0:18:42.13:0,42,557	0/0:57,0:57:99:0,147,1976	0/0:42,0:42:99:0,117,1567	0/0:52,0:52:99:0,131,1844	0/0:52,0:52:66.22:0,66,906	0/0:39,0:39:99:0,111,1520	0/0:8,0:8:8.81:0,9,99	0/0:28,0:28:62.90:0,63,816	0/0:23,0:18:48.14:0,48,626	0/0:24,0:24:43.25:0,43,839	0/0:164,0:162:99:0,409,5490	0/0:38,0:38:96.29:0,96,1283	0/0:17,0:17:45.15:0,45,617	0/0:80,0:80:99:0,223,3004	0/0:31,0:32:38.94:0,39,535	0/0:47,0:46:99:0,120,1475	0/0:19,0:19:13.31:0,13,220	0/0:18,0:18:26.42:0,26,254
chr10	4002508	.	C	CGT	571.12	PASS	AB=0.905;AC=3;AF=0.054;AN=56;BaseQRankSum=8.688;DP=1246;FS=4.967;HRun=0;HaplotypeScore=201.6317;InbreedingCoeff=-0.0684;MQ=53.22;MQ0=16;MQRankSum=-7.600;QD=6.08;ReadPosRankSum=-2.631;VQSLOD=2.2072;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:32.77:0,33,475	0/0:15,0:15:42.14:0,42,639	0/0:56,0:11:27.55:0,28,367	0/0:78,0:16:27.21:0,27,504	0/0:22,0:22:63.20:0,63,940	0/0:31,0:31:84.29:0,84,1280	0/0:48,0:47:99:0,129,1886	0/0:33,1:32:2.18:0,2,1090	0/0:46,0:46:99:0,126,1920	0/0:48,0:47:99:0,129,1944	0/0:22,0:22:63.19:0,63,912	0/0:67,0:67:99:0,186,2808	0/0:48,0:48:99:0,138,2071	0/0:63,0:63:99:0,184,2735	0/0:56,0:56:30.45:0,30,452	0/0:53,0:53:99:0,157,2326	0/1:6,4:10:62.74:63,0,78	0/0:13,0:13:21.03:0,21,283	0/0:17,0:17:51.17:0,51,774	0/0:24,0:24:69.23:0,69,1053	0/0:169,0:169:99:0,473,7083	0/0:34,0:34:99:0,99,1496	0/0:26,0:26:72.23:0,72,1075	0/0:74,0:73:99:0,199,2986	0/0:36,0:36:24.06:0,24,328	0/1:67,0:67:99:514,0,1652	0/0:28,0:28:6.24:0,6,574	0/1:17,0:17:87.83:94,0,88
chr10	4002518	.	C	CAT	542.04	PASS	AB=0.923;AC=4;AF=0.071;AN=56;BaseQRankSum=8.744;DP=1227;FS=4.722;HRun=0;HaplotypeScore=192.7144;InbreedingCoeff=-0.0704;MQ=53.28;MQ0=13;MQRankSum=-7.649;QD=4.93;ReadPosRankSum=-1.150;VQSLOD=2.9687;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:35.57:0,36,450	0/0:13,0:13:36.12:0,36,584	0/0:58,0:18:44.70:0,45,493	0/0:80,0:22:39.53:0,40,636	0/0:23,0:23:69.16:0,69,1037	0/0:32,0:32:87.28:0,87,1382	0/0:44,0:43:99:0,120,1719	0/0:29,1:29:20.08:0,20,1013	0/0:46,0:46:99:0,135,2086	0/0:52,0:51:99:0,147,2105	0/0:19,0:19:54.17:0,54,852	0/0:67,0:67:99:0,183,2829	0/0:45,0:45:99:0,135,2044	0/0:63,0:63:99:0,183,2754	0/0:60,0:60:15.40:0,15,238	0/0:49,0:49:99:0,147,2285	0/1:5,4:9:42.28:42,0,72	0/0:17,0:17:18.02:0,18,253	0/0:21,0:21:60.13:0,60,841	0/0:26,0:26:75.18:0,75,1138	0/0:163,0:162:99:0,442,6896	0/0:33,0:33:89.83:0,90,1406	0/0:26,0:26:72.23:0,72,1138	0/0:67,0:66:99:0,190,2978	0/0:38,0:38:14.84:0,15,211	0/1:58,0:58:99:541,0,1532	0/1:27,0:27:1.68:2,0,555	0/1:16,0:16:58.51:59,0,72
chr10	4002519	.	G	GCACATACACA	1409.88	PASS	AB=0.778;AC=16;AF=0.286;AN=56;BaseQRankSum=13.224;DP=1231;FS=9.812;HRun=0;HaplotypeScore=347.9350;InbreedingCoeff=0.8317;MQ=53.40;MQ0=13;MQRankSum=-10.776;QD=4.53;ReadPosRankSum=-1.319;VQSLOD=0.5345;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:36,9:45:26.81:453,27,0	0/0:12,0:12:27.09:0,27,716	0/0:59,0:19:38.70:0,39,539	0/0:77,0:22:36.29:0,36,518	0/0:24,0:24:66.18:0,66,1624	0/0:31,0:31:75.23:0,75,1968	0/0:42,0:41:96.19:0,96,1939	0/1:30,0:29:0.50:92,0,0	0/0:46,0:46:99:0,126,3265	0/0:52,0:51:99:0,126,3193	0/0:19,0:19:45.15:0,45,1114	0/0:67,0:67:99:0,171,4504	0/0:45,0:45:99:0,114,2921	0/0:63,0:63:99:0,153,3958	1/1:8,51:65:0.47:1,0,0	0/0:48,0:48:99:0,120,3102	1/1:9,0:9:6.93:27,7,0	0/1:4,14:20:0.10:277,0,0	0/0:19,0:19:36.03:0,36,716	0/0:26,0:26:63.13:0,63,1658	0/0:163,0:162:99:0,394,10207	0/0:32,0:32:84.26:0,84,2163	0/0:26,0:26:69.22:0,69,1779	0/0:67,0:66:99:0,156,4308	1/1:5,31:42:3.48:154,3,0	1/1:57,0:57:50.36:349,50,0	1/1:27,0:27:28.31:158,28,0	1/1:16,0:16:15.21:78,15,0
chr10	4002521	.	A	ATG	614.11	PASS	AB=0.900;AC=4;AF=0.071;AN=56;BaseQRankSum=8.751;DP=1245;FS=4.734;HRun=0;HaplotypeScore=189.6980;InbreedingCoeff=-0.0788;MQ=53.58;MQ0=12;MQRankSum=-7.843;QD=5.74;ReadPosRankSum=-0.486;VQSLOD=2.8343;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:38.94:0,39,635	0/0:12,0:12:36.12:0,36,587	0/0:59,0:22:54.47:0,54,847	0/0:79,0:23:45.17:0,45,760	0/0:23,0:23:69.24:0,69,1121	0/0:30,0:30:84.27:0,84,1345	0/0:43,0:42:99:0,120,1903	0/1:26,2:27:16.29:16,0,936	0/0:48,0:48:99:0,144,2243	0/0:55,0:54:99:0,157,2479	0/0:19,0:19:54.18:0,54,880	0/0:68,0:68:99:0,190,3053	0/0:46,0:46:99:0,135,2195	0/0:64,0:64:99:0,181,2885	0/0:63,0:64:12.39:0,12,196	0/0:49,0:49:99:0,147,2274	0/1:4,4:8:38.02:69,0,38	0/0:21,0:21:17.96:0,18,218	0/0:19,0:19:57.17:0,57,882	0/0:25,0:25:72.25:0,72,1174	0/0:173,0:172:99:0,458,7346	0/0:32,0:32:96.31:0,96,1541	0/0:26,0:26:69.24:0,69,1126	0/0:68,0:67:99:0,190,3073	0/0:43,0:43:14.91:0,15,188	0/1:55,0:55:99:544,0,1459	0/0:26,0:26:18.17:0,18,540	0/1:16,0:16:55.60:93,0,56
chr10	4002524	.	T	TGC	1422.99	PASS	AB=0.988;AC=6;AF=0.107;AN=56;BaseQRankSum=13.878;DP=1246;FS=6.719;HRun=0;HaplotypeScore=196.1052;InbreedingCoeff=0.1244;MQ=54.22;MQ0=13;MQRankSum=-12.962;QD=9.75;ReadPosRankSum=0.169;VQSLOD=2.6501;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:32.87:0,33,478	0/0:13,0:13:39.07:0,39,534	0/0:60,0:25:65.61:0,66,912	0/0:81,0:25:63.56:0,64,818	0/0:24,0:24:72.25:0,72,1165	0/0:31,0:32:84.21:0,84,1263	0/0:40,0:39:99:0,114,1704	0/1:36,2:36:99:577,0,286	0/0:48,0:48:99:0,144,2223	0/0:54,0:53:99:0,156,2377	0/0:20,0:20:51.14:0,51,777	0/0:67,0:67:99:0,186,2927	0/0:44,0:44:99:0,132,2021	0/0:62,0:62:99:0,181,2804	0/0:64,0:64:9.33:0,9,74	0/0:48,0:48:99:0,138,2091	1/1:10,4:14:1.81:113,2,0	0/0:20,0:20:8.75:0,9,131	0/0:20,0:20:57.13:0,57,785	0/0:24,0:24:69.21:0,69,1070	0/0:168,0:167:99:0,460,7140	0/0:33,0:33:99:0,99,1480	0/0:26,0:26:72.22:0,72,1127	0/0:66,0:65:99:0,186,2851	0/0:42,0:42:14.69:0,15,191	0/1:53,0:53:99:634,0,294	0/1:25,0:25:43.19:105,0,43	0/1:16,0:16:14.38:113,0,14
chr10	4002527	.	A	ATGCGTG	2776.15	PASS	AB=0.876;AC=5;AF=0.089;AN=56;BaseQRankSum=11.166;DP=1247;FS=9.579;HRun=0;HaplotypeScore=280.8041;InbreedingCoeff=-0.1025;MQ=55.01;MQ0=12;MQRankSum=-10.414;QD=18.51;ReadPosRankSum=-2.741;VQSLOD=1.6333;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:24.59:0,25,880	0/0:13,0:13:39.13:0,39,962	0/0:59,0:27:72.24:0,72,1719	0/0:80,0:26:49.70:0,50,1287	0/0:27,0:27:75.26:0,75,1894	0/0:31,0:31:87.30:0,87,2131	0/0:39,0:38:99:0,111,2778	0/1:36,0:34:99:187,0,683	0/0:50,0:50:99:0,140,3623	0/0:53,0:52:99:0,151,3756	0/0:19,0:19:54.19:0,54,1371	0/0:70,0:70:99:0,192,4731	0/0:43,0:43:99:0,129,3201	0/0:61,0:61:99:0,175,4428	0/0:63,0:63:7.24:0,7,95	0/0:49,0:49:99:0,141,3538	0/1:14,0:14:98.40:98,0,148	0/0:20,0:20:18.05:0,18,341	0/0:22,0:22:66.22:0,66,1538	0/0:24,0:24:69.22:0,69,1708	0/0:168,0:167:99:0,455,11516	0/0:32,0:32:96.32:0,96,2379	0/0:26,0:26:72.25:0,72,1843	0/0:68,0:67:99:0,188,4494	0/0:37,0:37:14.93:0,15,268	0/1:46,12:58:99:2069,0,1277	0/1:19,7:26:52:52,0,549	0/1:11,5:16:44.64:488,0,45
chr10	4002530	.	C	CAT	1793.61	PASS	AB=0.897;AC=7;AF=0.125;AN=56;BaseQRankSum=13.275;DP=1210;FS=6.697;HRun=0;HaplotypeScore=198.7422;InbreedingCoeff=0.1816;MQ=55.77;MQ0=10;MQRankSum=-11.611;QD=10.61;ReadPosRankSum=-1.340;VQSLOD=2.3590;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:40:29.85:0,30,427	0/0:13,0:13:33.10:0,33,478	0/0:59,0:29:74.95:0,75,986	0/0:78,0:28:57.11:0,57,795	0/0:27,0:27:78.23:0,78,1145	0/0:32,0:32:90.13:0,90,1235	0/0:40,0:40:99:0,117,1674	0/1:31,5:34:99:329,0,205	0/0:50,0:50:99:0,147,2119	0/0:50,0:50:99:0,150,2203	0/0:19,0:19:54.14:0,54,759	0/0:70,0:70:99:0,195,2837	0/0:42,0:42:99:0,126,1857	0/0:59,0:59:99:0,175,2584	0/0:50,0:50:9.32:0,9,72	0/0:48,0:48:99:0,141,1994	0/1:15,1:16:11.15:63,0,11	0/1:16,0:16:20.56:21,0,73	0/0:18,0:18:54.13:0,54,729	0/0:24,0:24:63.21:0,63,959	0/0:167,0:166:99:0,451,6652	0/0:31,0:31:93.28:0,93,1368	0/0:26,0:26:72.22:0,72,1060	0/0:65,0:64:99:0,183,2654	0/0:32,0:32:5.33:0,5,130	0/1:45,13:58:46.99:904,0,47	1/1:15,11:26:36.84:510,37,0	0/1:14,3:17:36.86:105,0,37
chr10	4002543	.	ATAG	A	962.12	PASS	AB=0.841;AC=6;AF=0.107;AN=56;BaseQRankSum=10.313;DP=1154;FS=1.277;HRun=0;HaplotypeScore=211.0412;InbreedingCoeff=-0.1202;MQ=58.77;MQ0=4;MQRankSum=-9.393;QD=6.59;ReadPosRankSum=-1.440;VQSLOD=2.9862;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:34.83:0,35,765	0/0:8,0:8:24.08:0,24,553	0/0:50,0:32:55.50:0,56,1475	0/0:68,0:36:90.14:0,90,1699	0/0:26,0:26:75.26:0,75,1720	0/0:29,0:29:84.26:0,84,1841	0/0:33,0:33:93.18:0,93,2138	0/1:24,5:28:48.47:48,0,1438	0/0:48,0:48:99:0,135,3057	0/0:55,0:55:99:0,163,3651	0/0:19,0:19:51.17:0,51,1152	0/0:66,0:66:99:0,184,4104	0/0:40,0:40:99:0,117,2692	0/0:59,0:59:99:0,175,3964	0/0:52,0:52:20.12:0,20,482	0/0:45,0:45:99:0,132,2995	0/1:13,2:15:20.57:21,0,247	0/1:18,0:18:35.87:36,0,391	0/0:22,0:22:54.18:0,54,1203	0/0:28,0:28:72.25:0,72,1640	0/0:159,1:158:99:0,424,9411	0/0:29,0:29:87.29:0,87,1919	0/0:29,0:29:81.26:0,81,1751	0/0:70,0:69:99:0,192,4272	0/0:36,0:36:22.13:0,22,547	0/1:33,12:45:99:480,0,1646	0/1:12,11:23:71.53:358,0,72	0/1:13,3:16:99:144,0,645
chr10	4002560	.	GCA	G	435.73	PASS	AB=0.860;AC=4;AF=0.071;AN=56;BaseQRankSum=9.522;DP=1121;FS=1.503;HRun=0;HaplotypeScore=198.4174;InbreedingCoeff=-0.0788;MQ=63.54;MQ0=3;MQRankSum=-6.925;QD=4.27;ReadPosRankSum=-4.030;VQSLOD=2.2671;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:68.26:0,68,1231	0/0:8,0:8:24.07:0,24,417	0/0:41,0:30:54.04:0,54,991	0/0:62,0:39:46.19:0,46,1126	0/0:28,0:28:78.27:0,78,1449	0/0:24,0:24:69.24:0,69,1293	0/0:37,0:37:99:0,108,1989	0/0:32,0:31:67.12:0,67,1348	0/0:50,0:50:99:0,138,2583	0/0:55,0:55:99:0,160,2944	0/0:22,0:21:60.21:0,60,1102	0/0:63,0:63:99:0,181,3370	0/0:41,0:41:99:0,117,2189	0/0:56,0:56:99:0,157,2890	0/0:49,0:49:35.95:0,36,637	0/0:43,0:43:99:0,123,2293	0/1:19,0:19:8.82:9,0,351	0/0:20,0:20:5.92:0,6,452	0/0:24,0:24:63.22:0,63,1156	0/0:28,0:28:78.27:0,78,1429	0/0:151,0:149:99:0,415,7714	0/0:23,0:23:66.23:0,66,1236	0/0:27,0:27:75.26:0,75,1405	0/0:59,0:58:99:0,156,2897	0/0:32,0:32:29.95:0,30,562	0/1:35,9:44:99:243,0,1583	0/1:15,7:22:99:212,0,180	0/1:14,3:17:77.92:78,0,575
chr10	4003708	.	A	ATG	1372.96	PASS	AB=0.758;AC=3;AF=0.054;AN=56;BaseQRankSum=8.888;DP=985;DS;FS=86.579;HRun=0;HaplotypeScore=177.0495;InbreedingCoeff=-0.0572;MQ=59.35;MQ0=19;MQRankSum=-8.805;QD=11.44;ReadPosRankSum=0.452;VQSLOD=0.1955;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:66,3:66:47.95:0,48,1570	0/0:12,0:12:36.12:0,36,586	0/0:20,0:18:41.85:0,42,599	0/0:21,0:19:43.69:0,44,636	0/0:14,0:14:39.09:0,39,606	0/0:15,0:15:39.13:0,39,635	0/0:45,0:45:99:0,129,2087	0/0:167,7:144:99:0,332,5571	0/0:26,0:26:75.24:0,75,1184	0/0:26,0:26:78.27:0,78,1270	0/0:8,0:8:18.05:0,18,270	0/0:34,0:34:99:0,99,1563	0/0:33,0:33:90.24:0,90,1435	0/0:32,0:32:90.20:0,90,1440	0/0:26,0:26:78.20:0,78,1214	0/0:24,0:24:69.24:0,69,1124	0/1:25,55:58:99:1294,0,627	0/0:26,1:27:22.60:0,23,1141	0/0:20,0:20:60.13:0,60,917	0/0:11,0:11:30.10:0,30,489	0/0:114,0:113:99:0,301,4801	0/0:10,0:10:27.08:0,27,414	0/0:18,0:17:51.14:0,51,790	0/0:28,0:27:78.25:0,78,1245	0/0:16,0:16:48.15:0,48,757	0/0:39,3:35:23.48:0,23,1185	0/1:22,6:22:78.37:78,0,498	0/1:10,2:11:99:101,0,223
chr10	4007443	.	AGCCTGTCG	A	994.05	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.556;DP=591;FS=3.763;HRun=0;HaplotypeScore=148.9618;InbreedingCoeff=0.9170;MQ=66.94;MQ0=1;MQRankSum=-5.442;QD=47.34;ReadPosRankSum=1.169;VQSLOD=3.3414;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:47:99:0,138,5722	0/0:4,0:4:12:0,12,301	0/0:21,0:20:53.40:0,53,2163	0/0:15,0:14:32.73:0,33,1524	0/0:17,0:17:48.16:0,48,2012	0/0:22,0:22:63.22:0,63,2836	0/0:26,0:26:78.25:0,78,3397	0/0:18,0:18:54.16:0,54,2173	0/0:21,0:21:63.22:0,63,2851	0/0:26,0:26:75.25:0,75,3199	0/0:16,0:16:42.14:0,42,1870	0/0:22,0:22:66.23:0,66,3054	0/0:23,0:23:69.24:0,69,3069	0/0:26,0:26:78.27:0,78,3541	0/0:23,0:23:69.24:0,69,2991	0/0:27,0:26:81.28:0,81,3746	1/1:0,21:21:36.12:1089,36,0	0/0:17,0:17:48.16:0,48,2222	0/0:9,0:9:27.09:0,27,1086	0/0:20,0:20:54.16:0,54,2357	0/0:42,0:42:99:0,126,5360	0/0:25,0:25:75.23:0,75,3220	0/0:18,0:18:54.17:0,54,2273	0/0:25,0:25:75.24:0,75,3262	0/0:14,0:14:39.13:0,39,1710	0/0:19,0:19:57.18:0,57,2382	0/0:21,0:21:63.22:0,63,2914	0/0:4,0:4:9.03:0,9,416
chr10	4009734	.	CTCATCAAAAA	C	6100.60	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=11.915;DP=629;FS=1.027;HRun=0;HaplotypeScore=182.1699;InbreedingCoeff=0.9969;MQ=57.79;MQ0=0;MQRankSum=-8.966;QD=91.05;ReadPosRankSum=1.725;VQSLOD=5.1395;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:93.26:0,93,4426	0/0:12,0:12:36.12:0,36,1781	0/0:17,0:12:36.10:0,36,1478	0/0:19,0:16:48.14:0,48,2176	0/0:28,0:28:84.27:0,84,4457	0/0:27,0:27:81.28:0,81,4203	0/0:16,0:16:42.13:0,42,2167	0/0:30,0:30:62.30:0,62,4233	0/0:19,0:19:57.20:0,57,2988	0/0:32,0:32:96.27:0,96,4601	0/0:27,0:27:81.28:0,81,4134	0/0:11,0:11:33.09:0,33,1534	0/0:25,0:25:75.26:0,75,4090	0/0:17,0:17:51.18:0,51,2772	0/0:35,0:35:99:0,105,5345	0/0:18,0:17:51.16:0,51,2662	0/0:19,0:19:54.19:0,54,2673	0/0:20,0:20:60.18:0,60,2892	0/0:16,0:14:42.14:0,42,1938	0/0:33,0:33:99:0,99,4825	0/0:19,0:19:57.20:0,57,3047	0/0:21,0:21:60.21:0,60,3120	0/0:27,0:27:81.25:0,81,4074	0/0:12,0:12:36.11:0,36,1830	0/0:29,0:29:87.29:0,87,4432	1/1:0,30:30:90.28:2756,90,0	1/1:0,31:31:78.27:2717,78,0	1/1:0,6:6:18.06:627,18,0
chr10	4010020	.	A	AAT	700.84	PASS	AB=0.537;AC=1;AF=0.018;AN=56;BaseQRankSum=1.909;DP=621;FS=2.106;HRun=0;HaplotypeScore=78.7827;InbreedingCoeff=0.4737;MQ=58.01;MQ0=8;MQRankSum=1.552;QD=31.86;ReadPosRankSum=0.222;VQSLOD=5.3908;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:57.16:0,57,737	0/0:7,0:7:21.07:0,21,284	0/0:5,0:3:6.02:0,6,76	0/0:8,0:6:12.04:0,12,153	0/0:33,0:33:90.23:0,90,1166	0/0:27,0:27:69.22:0,69,919	0/0:10,0:10:30.08:0,30,389	0/0:39,0:25:48.12:0,48,625	0/0:29,0:29:78.23:0,78,1009	0/0:28,0:28:81.26:0,81,1071	0/0:27,0:27:78.24:0,78,1036	0/0:16,0:16:48.14:0,48,620	0/0:17,0:16:42.14:0,42,567	0/0:17,0:17:48.15:0,48,635	0/0:27,0:27:69.21:0,69,905	0/0:16,0:16:45.14:0,45,595	0/1:3,18:21:1.56:775,0,2	0/0:18,0:18:48.16:0,48,649	0/0:18,0:16:48.14:0,48,621	0/0:37,0:37:99:0,108,1385	0/0:24,0:24:63.20:0,63,835	0/0:17,0:17:48.15:0,48,635	0/0:36,0:36:99:0,99,1306	0/0:14,0:14:39.51:0,40,460	0/0:25,0:25:66.20:0,66,864	0/0:32,0:32:96.29:0,96,1244	0/0:34,0:33:96.26:0,96,1233	0/0:17,0:17:45.15:0,45,607
chr10	4010168	.	C	CA	2746.83	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=-2.894;DP=613;FS=1.978;HRun=8;HaplotypeScore=59.8974;InbreedingCoeff=0.9050;MQ=56.24;MQ0=7;MQRankSum=-0.700;QD=22.33;ReadPosRankSum=-2.363;VQSLOD=3.2177;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:34:88.28:0,88,820	0/0:7,0:7:18.01:0,18,165	0/1:9,0:4:2.97:3,0,46	0/0:12,0:10:25.99:0,26,196	0/0:37,0:37:81.04:0,81,741	0/0:32,0:32:87.01:0,87,786	0/0:15,0:15:19.47:0,19,334	1/1:9,23:26:54.14:612,54,0	0/0:26,0:26:72.03:0,72,659	0/0:21,0:21:54.02:0,54,494	0/0:21,0:21:57.03:0,57,521	0/0:13,0:13:30.01:0,30,275	0/0:16,0:16:42.01:0,42,380	0/0:17,0:17:36.01:0,36,330	0/0:25,0:25:72.02:0,72,653	0/0:16,0:16:47.98:0,48,427	0/0:34,0:34:80.67:0,81,830	0/0:26,0:26:65.98:0,66,592	0/0:20,0:16:48.01:0,48,435	0/0:22,0:22:57.01:0,57,522	0/0:31,0:30:81.03:0,81,741	0/0:18,0:18:44.63:0,45,411	0/0:22,0:22:42.01:0,42,384	0/0:13,0:13:35.98:0,36,322	0/0:12,0:12:30.01:0,30,274	1/1:7,28:34:59.77:929,60,0	1/1:0,34:33:90.27:1039,90,0	1/1:0,12:13:29.92:326,30,0
chr10	4010373	.	CAT	C	303.41	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.204;DP=906;FS=22.206;HRun=0;HaplotypeScore=76.5973;InbreedingCoeff=0.7370;MQ=39.32;MQ0=148;MQRankSum=-4.522;QD=15.97;ReadPosRankSum=-2.076;VQSLOD=0.9582;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:90,0:30:54.19:0,54,1009	0/0:6,0:6:12.04:0,12,225	0/0:16,0:2:5.05:0,5,58	0/0:12,0:1:3.01:0,3,43	0/0:29,0:29:72.25:0,72,1348	0/0:20,0:17:48.16:0,48,898	0/0:28,0:13:27.09:0,27,505	1/1:8,11:10:27.09:397,27,0	0/0:29,0:27:66.20:0,66,1167	0/0:31,0:30:84.29:0,84,1573	0/0:28,0:28:69.24:0,69,1281	0/0:20,0:19:45.15:0,45,810	0/0:25,0:20:54.17:0,54,977	0/0:20,0:19:39.12:0,39,694	0/0:21,0:18:51.17:0,51,954	0/0:18,0:18:48.16:0,48,898	0/0:111,0:38:75.18:0,75,1294	0/0:136,0:41:69.24:0,69,1291	0/0:22,0:10:30.09:0,30,532	0/0:37,0:36:96.32:0,96,1766	0/0:29,0:20:39.13:0,39,730	0/0:17,0:17:42.06:0,42,786	0/0:22,0:22:51.17:0,51,946	0/0:52,0:26:48.16:0,48,897	0/0:16,0:15:39.10:0,39,665	0/0:12,0:11:30.10:0,30,562	0/0:28,0:26:72.23:0,72,1312	0/0:12,0:9:15.05:0,15,281
chr10	4010773	.	C	CA	1202.71	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-8.553;DP=417;FS=5.957;HRun=1;HaplotypeScore=42.2797;InbreedingCoeff=0.9087;MQ=61.05;MQ0=1;MQRankSum=2.524;QD=35.37;ReadPosRankSum=-4.879;VQSLOD=1.4778;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:45.15:0,45,583	0/0:4,0:4:12.04:0,12,156	0/0:11,0:8:21.05:0,21,252	0/0:7,0:6:18.06:0,18,231	0/0:28,0:28:72.23:0,72,934	0/0:20,0:20:60.19:0,60,777	0/0:6,0:6:15.05:0,15,195	1/1:3,31:34:90.25:1298,90,0	0/0:13,0:13:39.13:0,39,506	0/0:20,0:20:57.18:0,57,740	0/0:24,0:24:69.22:0,69,892	0/0:9,0:9:27.09:0,27,351	0/0:16,0:16:45.15:0,45,584	0/0:7,0:7:21.07:0,21,272	0/0:10,0:10:27.08:0,27,342	0/0:11,0:11:33.11:0,33,428	0/0:9,0:9:24.08:0,24,311	0/0:12,0:12:36.12:0,36,465	0/0:11,0:9:24.08:0,24,312	0/0:22,0:22:63.18:0,63,798	0/0:15,0:15:45.13:0,45,569	0/0:12,0:12:33.11:0,33,428	0/0:24,0:24:69.22:0,69,895	0/0:4,0:4:12.04:0,12,154	0/0:14,0:14:42.14:0,42,545	0/0:22,0:22:63.20:0,63,818	0/0:21,0:21:57.18:0,57,738	0/0:15,0:15:39.13:0,39,507
chr10	4010851	.	TCC	T	1441.77	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=2.668;DP=350;FS=5.749;HRun=4;HaplotypeScore=47.0773;InbreedingCoeff=0.8458;MQ=65.16;MQ0=13;MQRankSum=-0.950;QD=22.53;ReadPosRankSum=1.246;VQSLOD=0.9981;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:2,0:6:8.19:0,8,53	0/0:7,0:7:21.03:0,21,332	0/0:45,0:16:39.08:0,39,606	0/0:32,0:15:35.35:0,35,560	0/0:14,0:13:30.04:0,30,419	0/0:10,0:10:30.08:0,30,468	0/0:6,0:6:15.05:0,15,257	1/1:11,1:12:33.10:437,33,0	0/0:6,0:6:15.05:0,15,251	0/0:24,0:23:56.64:0,57,866	0/0:15,0:14:30.56:0,31,479	0/0:7,0:7:20.99:0,21,321	0/0:7,0:6:15.05:0,15,252	0/0:7,0:7:15.05:0,15,250	0/0:11,0:10:27.09:0,27,463	0/0:8,0:8:24.08:0,24,419	0/0:3,0:6:5.46:0,5,146	0/0:6,0:6:14.98:0,15,208	0/0:14,0:13:33.05:0,33,513	0/0:13,0:11:24.05:0,24,352	0/0:2,0:2:6.02:0,6,107	0/0:7,0:7:18.04:0,18,285	0/0:9,0:9:24.06:0,24,350	0/0:7,0:7:18.05:0,18,289	0/0:14,0:13:27.09:0,27,467	1/1:4,16:19:48.10:596,48,0	1/1:0,9:9:3.01:36,3,0	1/1:20,2:22:47.97:524,48,0
chr10	4011692	.	TA	T	1923.72	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.639;DP=743;FS=4.767;HRun=1;HaplotypeScore=115.6983;InbreedingCoeff=0.9748;MQ=56.74;MQ0=12;MQRankSum=0.876;QD=26.72;ReadPosRankSum=4.055;VQSLOD=3.6508;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,138,2197	0/0:12,0:12:36.12:0,36,573	0/0:21,0:17:51.03:0,51,757	0/0:18,0:12:36.07:0,36,516	0/0:36,0:35:99:0,102,1572	0/0:29,0:29:84.28:0,84,1326	0/0:20,0:19:33.09:0,33,503	0/0:27,0:24:69.12:0,69,1020	0/0:28,0:28:84.27:0,84,1315	0/0:31,0:31:93.27:0,93,1438	0/0:28,0:27:78.22:0,78,1173	0/0:23,0:23:66.21:0,66,1031	0/0:18,0:18:54.18:0,54,862	0/0:28,0:28:81.26:0,81,1266	1/1:0,26:26:75.19:912,75,0	0/0:21,0:21:63.20:0,63,979	0/0:26,0:26:75.24:0,75,1154	1/1:4,22:24:8.79:517,9,0	0/0:25,0:24:72.23:0,72,1107	0/0:35,0:35:99:0,105,1648	0/0:43,0:43:99:0,129,1932	0/0:18,0:18:51.17:0,51,815	0/0:33,0:33:99:0,99,1557	0/0:23,0:23:66.21:0,66,1022	1/1:2,18:19:51.16:632,51,0	0/0:30,0:29:81.27:0,81,1208	0/0:37,0:36:99:0,108,1589	0/0:10,0:10:18.06:0,18,270
chr10	4012000	.	AAATTGG	A	2954.53	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.882;DP=555;FS=9.240;HRun=0;HaplotypeScore=112.3970;InbreedingCoeff=0.9764;MQ=57.22;MQ0=1;MQRankSum=-7.719;QD=55.75;ReadPosRankSum=0.263;VQSLOD=3.5864;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:72.25:0,72,2459	0/0:10,0:10:30.10:0,30,1072	0/0:23,0:17:48.16:0,48,1464	0/0:11,0:9:21.07:0,21,646	0/0:34,0:34:93.32:0,93,3238	0/0:19,0:19:57.20:0,57,2034	0/0:5,0:5:12.04:0,12,429	0/0:25,0:25:75.26:0,75,2508	0/0:21,0:21:57.20:0,57,2034	0/0:25,0:25:66.22:0,66,2325	0/0:21,0:21:63.22:0,63,2248	0/0:15,0:15:45.15:0,45,1566	0/0:16,0:16:48.16:0,48,1714	0/0:12,0:12:36.12:0,36,1197	0/0:21,0:21:63.22:0,63,2204	0/0:25,0:25:75.24:0,75,2583	0/0:29,0:29:87.30:0,87,2956	0/0:21,0:21:57.20:0,57,2010	0/0:16,0:16:48.16:0,48,1659	0/0:38,0:38:99:0,105,3545	0/0:17,0:17:48.16:0,48,1712	0/0:17,0:17:51.18:0,51,1799	0/0:22,0:22:66.23:0,66,2282	0/0:15,0:15:42.14:0,42,1500	0/0:18,0:18:54.19:0,54,1790	1/1:4,19:23:60.17:1291,60,0	1/1:1,24:25:63.22:1514,63,0	1/1:0,5:5:12.04:288,12,0
chr10	4012705	.	C	CG	5230.99	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=2.080;DP=529;FS=8.441;HRun=3;HaplotypeScore=51.4116;InbreedingCoeff=0.9745;MQ=53.36;MQ0=2;MQRankSum=-10.040;QD=30.06;ReadPosRankSum=-0.754;VQSLOD=3.4528;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,41:38:75.25:1041,75,0	0/0:5,0:5:12.04:0,12,144	0/0:11,0:5:15.05:0,15,180	0/0:14,0:8:21.06:0,21,252	0/0:14,0:14:36.11:0,36,432	0/0:24,0:24:72.21:0,72,852	0/0:16,0:16:45.14:0,45,539	1/1:3,14:15:7.52:476,8,0	0/0:16,0:16:45.14:0,45,539	0/0:18,0:18:48.15:0,48,576	0/0:28,0:28:81.25:0,81,971	0/0:15,0:15:42.12:0,42,492	0/0:25,0:25:75.19:0,75,880	0/0:16,0:16:45.14:0,45,540	1/1:1,13:12:27.09:377,27,0	0/0:11,0:11:33.10:0,33,396	1/1:2,17:16:33.11:448,33,0	1/1:0,15:16:45.15:616,45,0	0/0:14,0:13:36.11:0,36,432	0/0:28,0:28:78.23:0,78,924	0/0:37,0:37:96.27:0,96,1136	0/0:24,0:24:63.18:0,63,745	0/0:17,0:17:45.14:0,45,540	0/0:22,0:22:66.16:0,66,775	1/1:0,23:23:66.22:911,66,0	1/1:1,18:16:42.14:575,42,0	1/1:2,16:17:45.15:618,45,0	1/1:0,5:5:12.04:168,12,0
chr10	4013191	.	GCA	G	630.30	PASS	AB=0.548;AC=1;AF=0.018;AN=56;BaseQRankSum=4.637;DP=685;FS=4.910;HRun=0;HaplotypeScore=95.6292;InbreedingCoeff=0.4887;MQ=57.57;MQ0=22;MQRankSum=-4.801;QD=27.40;ReadPosRankSum=-0.330;VQSLOD=4.8379;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:4,19:22:2.94:705,0,3	0/0:8,0:8:24.08:0,24,473	0/0:52,0:16:45.07:0,45,818	0/0:39,0:12:36.02:0,36,567	0/0:25,0:25:72.23:0,72,1425	0/0:25,0:25:66.23:0,66,1340	0/0:15,0:14:39.61:0,40,778	0/0:35,0:29:81.26:0,81,1603	0/0:21,0:21:63.20:0,63,1244	0/0:26,0:25:75.25:0,75,1489	0/0:20,0:20:60.21:0,60,1197	0/0:14,0:14:42.14:0,42,854	0/0:21,0:21:63.22:0,63,1266	0/0:23,0:23:66.21:0,66,1305	0/0:19,0:19:57.20:0,57,1143	0/0:21,0:21:63.22:0,63,1267	0/0:25,0:25:72.25:0,72,1440	0/0:23,0:23:63.22:0,63,1258	0/0:20,0:18:54.17:0,54,1062	0/0:32,0:31:93.32:0,93,1889	0/0:18,0:18:54.17:0,54,1041	0/0:25,0:25:75.26:0,75,1523	0/0:29,0:29:84.29:0,84,1707	0/0:27,0:27:78.27:0,78,1583	0/0:21,0:21:60.21:0,60,1207	0/0:29,0:28:84.28:0,84,1657	0/0:40,0:40:99:0,111,2240	0/0:9,0:9:24.08:0,24,487
chr10	4013214	.	TA	T	5392.13	PASS	AB=0.550;AC=17;AF=0.304;AN=56;BaseQRankSum=14.022;DP=682;FS=5.819;HRun=6;HaplotypeScore=72.8156;InbreedingCoeff=0.9024;MQ=58.52;MQ0=13;MQRankSum=-5.743;QD=25.08;ReadPosRankSum=1.529;VQSLOD=5.0758;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,26:27:63.16:677,63,0	0/0:5,0:5:15.05:0,15,197	0/0:57,3:22:30.46:0,30,460	0/0:33,4:13:19.66:0,20,265	0/0:27,0:27:75.23:0,75,972	0/0:23,0:23:54.18:0,54,711	0/0:15,0:15:45.15:0,45,592	1/1:8,16:23:42.10:451,42,0	0/0:18,0:18:54.18:0,54,711	0/0:26,0:26:72.21:0,72,921	0/0:14,0:14:36.12:0,36,473	0/0:15,0:15:39.13:0,39,513	0/0:25,0:25:75.24:0,75,986	0/0:24,0:24:66.18:0,66,838	1/1:3,21:24:63.16:677,63,0	0/0:16,0:16:45.15:0,45,592	1/1:0,27:27:69.17:741,69,0	1/1:0,16:16:42.11:451,42,0	0/0:25,0:22:60.20:0,60,790	0/0:33,0:32:93.28:0,93,1194	0/0:25,0:25:75.21:0,75,968	0/0:18,0:18:51.17:0,51,671	0/0:31,0:31:87.28:0,87,1142	0/0:29,0:29:72.22:0,72,933	1/1:1,19:20:51.13:548,51,0	0/1:6,27:32:31.17:751,0,31	1/1:4,35:39:93.10:999,93,0	1/1:1,3:4:9.02:97,9,0
chr10	4013587	.	A	AG	5013.01	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-1.359;DP=674;FS=1.248;HRun=0;HaplotypeScore=59.5169;InbreedingCoeff=0.9981;MQ=54.71;MQ0=3;MQRankSum=-7.836;QD=36.86;ReadPosRankSum=-0.070;VQSLOD=4.4622;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,22:21:48.16:765,48,0	0/0:13,0:13:39.13:0,39,545	0/0:19,0:10:30.10:0,30,419	0/0:20,1:13:39.08:0,39,522	0/0:42,0:42:99:0,123,1687	0/0:40,0:40:99:0,117,1605	0/0:17,0:16:42.10:0,42,565	1/1:2,15:10:29.98:387,30,0	0/0:19,0:19:57.18:0,57,779	0/0:28,0:28:84.28:0,84,1162	0/0:18,0:18:54.18:0,54,755	0/0:22,0:22:66.19:0,66,875	0/0:27,0:27:81.26:0,81,1117	0/0:28,0:29:81.24:0,81,1072	0/0:33,0:33:96.30:0,96,1310	0/0:23,0:23:69.22:0,69,950	1/1:1,12:14:18.06:287,18,0	0/0:27,0:27:78.22:0,78,1053	0/0:24,0:22:63.21:0,63,881	0/0:32,0:31:90.28:0,90,1226	0/0:24,0:25:66.21:0,66,907	0/0:20,0:20:57.18:0,57,782	0/0:24,0:24:69.22:0,69,948	0/0:14,0:14:36.10:0,36,471	0/0:19,0:19:51.14:0,51,692	1/1:0,35:35:99:1600,102,0	1/1:2,30:32:87.30:1373,87,0	1/1:0,15:16:39.12:602,39,0
chr10	4014127	.	CAACAAA	C	439.70	PASS	AB=0.524;AC=3;AF=0.056;AN=54;BaseQRankSum=4.678;DP=670;FS=0.000;HRun=0;HaplotypeScore=122.8545;InbreedingCoeff=0.4330;MQ=53.65;MQ0=17;MQRankSum=-4.577;QD=10.99;ReadPosRankSum=1.701;VQSLOD=2.1008;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:27:63.22:0,63,2170	0/0:8,0:8:24.08:0,24,754	0/0:28,0:18:48.16:0,48,1525	0/0:19,0:14:39.12:0,39,1164	0/0:37,0:37:96.28:0,96,3184	0/0:39,0:39:99:0,105,3505	0/0:8,0:8:21.04:0,21,656	0/0:17,0:4:6.02:0,6,212	0/0:30,0:30:87.30:0,87,2926	0/0:27,0:26:78.26:0,78,2548	0/0:23,0:23:60.20:0,60,1988	0/0:31,0:31:90.31:0,90,3019	0/0:27,0:27:75.21:0,75,2342	0/0:22,0:22:63.22:0,63,2172	0/0:33,0:33:93.29:0,93,2928	0/0:34,0:32:90.27:0,90,3093	0/0:27,0:25:57.15:0,57,1737	0/0:20,0:19:51.18:0,51,1709	0/0:21,0:18:51.13:0,51,1598	0/0:30,0:30:90.29:0,90,3020	0/0:27,0:27:66.23:0,66,2290	0/0:21,0:21:54.18:0,54,1781	0/0:23,0:22:63.21:0,63,1970	0/0:23,0:20:57.20:0,57,2014	0/0:22,0:22:60.21:0,60,2008	0/1:2,20:15:67.92:462,0,68	1/1:4,14:12:3.01:69,3,0	./.
chr10	4017215	.	CTTG	C	772.86	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.719;DP=714;FS=0.910;HRun=0;HaplotypeScore=97.9947;InbreedingCoeff=0.9897;MQ=71.96;MQ0=0;MQRankSum=-3.898;QD=24.93;ReadPosRankSum=3.963;VQSLOD=3.8307;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,29:31:54.18:868,54,0	0/0:6,0:6:18.06:0,18,397	0/0:22,0:22:49.41:0,49,927	0/0:13,0:13:23.94:0,24,412	0/0:25,0:25:72.23:0,72,1531	0/0:29,0:29:78.25:0,78,1648	0/0:20,0:20:54.17:0,54,1150	0/0:39,0:39:99:0,105,2289	0/0:26,0:26:75.24:0,75,1597	0/0:33,0:33:90.31:0,90,1988	0/0:31,0:31:87.30:0,87,1920	0/0:28,0:28:69.24:0,69,1523	0/0:28,0:28:81.28:0,81,1781	0/0:23,0:23:60.21:0,60,1325	0/0:24,0:24:72.25:0,72,1590	0/0:25,0:25:75.24:0,75,1614	0/0:41,0:41:99:0,117,2545	0/0:19,0:19:51.18:0,51,1125	0/0:16,0:16:42.12:0,42,861	0/0:43,0:43:99:0,126,2764	0/0:24,0:24:63.13:0,63,1319	0/0:26,0:26:75.15:0,75,1571	0/0:28,0:28:84.26:0,84,1722	0/0:21,0:21:63.22:0,63,1391	0/0:25,0:25:69.24:0,69,1507	0/0:30,0:30:87.30:0,87,1908	0/0:25,0:24:72.25:0,72,1556	0/0:13,0:13:33.11:0,33,728
chr10	4019316	.	C	CG	136.17	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-1.269;DP=355;FS=1.327;HRun=6;HaplotypeScore=52.2090;InbreedingCoeff=0.6279;MQ=81.72;MQ0=0;MQRankSum=0.041;QD=10.47;ReadPosRankSum=-0.383;VQSLOD=0.7502;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:21.49:0,21,205	0/0:7,0:7:12.01:0,12,115	0/0:13,0:12:6.76:0,7,165	0/0:28,0:28:24.28:0,24,383	0/0:6,0:6:9.02:0,9,89	0/0:12,0:12:11.77:0,12,122	0/0:18,0:18:37.30:0,37,359	0/0:14,0:14:15.02:0,15,147	0/0:9,0:9:24.05:0,24,243	0/0:8,0:8:9.02:0,9,92	0/0:7,0:7:9:0,9,85	0/0:16,0:16:32.96:0,33,321	0/0:14,0:14:30.62:0,31,289	0/0:13,0:13:28.78:0,29,253	0/0:22,0:22:54.08:0,54,549	0/0:20,0:20:45.08:0,45,451	1/1:3,10:13:18.06:226,18,0	0/0:10,0:10:19.79:0,20,170	0/0:11,0:11:23.83:0,24,236	0/0:9,0:9:15.02:0,15,149	0/0:22,0:22:46.34:0,46,460	0/0:13,0:13:21.04:0,21,214	0/0:8,0:8:6.40:0,6,52	0/0:10,0:10:27.03:0,27,262	0/0:7,0:7:12.02:0,12,122	0/0:9,0:9:17.97:0,18,171	0/0:15,0:14:39.03:0,39,375	0/0:8,0:8:12:0,12,112
chr10	4020919	.	CACG	C	382.57	PASS	AC=2;AF=0.038;AN=52;BaseQRankSum=0.139;DP=2119;DS;FS=24.085;HRun=0;HaplotypeScore=204.0491;InbreedingCoeff=0.9293;MQ=26.49;MQ0=883;MQRankSum=-4.845;QD=2.99;ReadPosRankSum=-2.188;VQSLOD=1.0243;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:250,0:107:99:0,183,3732	0/0:15,0:11:30.10:0,30,661	./.	./.	0/0:34,0:20:35.95:0,36,758	0/0:32,0:17:27.09:0,27,579	0/0:45,0:12:15.05:0,15,284	1/1:119,9:10:27.09:476,27,0	0/0:72,0:50:78.27:0,78,1796	0/0:49,0:27:81.27:0,81,1822	0/0:14,0:11:21.07:0,21,494	0/0:50,0:39:62.75:0,63,1480	0/0:69,0:51:99:0,99,2176	0/0:38,0:27:45.02:0,45,894	0/0:153,0:31:15.04:0,15,351	0/0:50,0:39:77.99:0,78,1655	0/0:122,0:15:12.04:0,12,261	0/0:49,0:12:24.08:0,24,554	0/0:20,0:7:21.07:0,21,475	0/0:26,0:23:54.19:0,54,1249	0/0:96,0:46:99:0,108,2297	0/0:45,0:32:54.03:0,54,1223	0/0:22,0:17:30.10:0,30,691	0/0:55,0:37:50.64:0,51,1132	0/0:59,0:37:48.03:0,48,930	0/0:250,0:99:99:0,264,5505	0/0:250,0:99:99:0,165,3589	0/0:126,0:46:99:0,99,2181
chr10	4020970	.	CACG	C	455.59	PASS	AB=0.900;AC=6;AF=0.120;AN=50;BaseQRankSum=0.720;DP=2228;DS;FS=2.202;HRun=0;HaplotypeScore=116.4522;InbreedingCoeff=0.1336;MQ=17.56;MQ0=1110;MQRankSum=-2.311;QD=0.80;ReadPosRankSum=-1.192;VQSLOD=2.3267;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:172,0:29:3.01:0,3,46	0/0:17,0:9:18.06:0,18,420	./.	./.	0/1:25,0:10:0:0,0,0	0/0:34,0:11:9.03:0,9,210	./.	1/1:250,0:1:2.97:20,3,0	0/0:70,0:32:29.70:0,30,699	0/0:42,0:12:36.12:0,36,810	0/0:23,0:9:2.78:0,3,70	0/0:70,0:45:17.88:0,18,419	0/0:72,0:43:24.08:0,24,557	0/0:50,0:29:9.02:0,9,205	0/1:139,35:43:99:392,0,110	0/0:65,0:33:32.97:0,33,770	0/0:159,0:18:9.03:0,9,197	0/1:42,4:9:43.73:44,0,132	0/0:22,0:8:24.08:0,24,537	0/0:26,0:11:21.07:0,21,490	0/0:95,0:13:5.89:0,6,140	0/0:50,0:17:15.05:0,15,350	0/0:20,0:10:6.02:0,6,140	0/0:57,0:22:2.74:0,3,70	0/1:59,13:39:99:107,0,809	0/0:250,0:41:99:0,114,2582	0/0:199,0:25:24.06:0,24,558	0/0:116,0:26:14.93:0,15,166
chr10	4021272	.	C	CGA	90.89	PASS	AB=0.897;AC=5;AF=0.417;AN=12;BaseQRankSum=0.555;DP=1214;FS=0.000;HRun=0;HaplotypeScore=7.2835;MQ=7.29;MQ0=804;MQRankSum=1.294;QD=0.79;ReadPosRankSum=1.849;VQSLOD=0.4920;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:45,5:7:1.82:56,2,0	./.	./.	./.	./.	./.	./.	./.	./.	0/0:51,0:5:15.02:0,15,213	./.	./.	./.	./.	0/0:110,19:9:3.01:0,3,49	./.	./.	0/1:23,3:2:42.86:55,0,43	0/0:11,0:1:3.01:0,3,49	./.	./.	1/1:39,0:2:3.01:58,3,0	./.	./.	./.	./.	./.	./.
chr10	4021320	.	A	ATG	93.12	PASS	AC=4;AF=0.286;AN=14;BaseQRankSum=1.708;DP=1126;FS=0.000;HRun=0;HaplotypeScore=10.5166;MQ=9.64;MQ0=723;MQRankSum=-0.382;QD=1.58;ReadPosRankSum=-0.566;VQSLOD=0.6186;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:28,5:9:5.99:114,6,0	./.	./.	./.	./.	./.	./.	./.	./.	0/0:58,0:6:11.66:0,12,195	./.	0/0:61,0:17:3.01:0,3,49	./.	0/0:76,0:17:0:0,0,0	0/0:106,7:22:6.02:0,6,98	./.	./.	1/1:22,3:1:3.01:58,3,0	./.	./.	./.	./.	./.	./.	./.	0/0:61,0:1:3.01:0,3,49	./.	./.
chr10	4021417	.	C	CATG	566.54	PASS	AB=0.844;AC=3;AF=0.071;AN=42;BaseQRankSum=-1.617;DP=1008;FS=0.000;HRun=0;HaplotypeScore=59.3046;InbreedingCoeff=0.3275;MQ=14.45;MQ0=608;MQRankSum=0.386;QD=10.69;ReadPosRankSum=1.565;VQSLOD=2.9683;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:7:3.01:0,3,37	0/0:21,0:6:6.02:0,6,96	./.	./.	./.	0/0:29,0:6:6.02:0,6,96	0/0:33,0:7:12.04:0,12,179	./.	0/0:69,0:31:30.10:0,30,481	0/0:59,0:6:15.05:0,15,241	0/0:29,0:9:9.03:0,9,144	0/0:59,0:21:9.03:0,9,144	0/0:67,0:18:12.04:0,12,180	0/0:61,0:19:18.06:0,18,288	0/0:44,0:15:3.01:0,3,48	0/0:69,0:18:18.06:0,18,289	./.	0/0:17,0:4:9.50:0,10,145	0/0:21,0:5:12.04:0,12,193	0/0:34,0:11:9.03:0,9,144	0/0:111,0:19:18.05:0,18,289	0/0:43,0:8:8.86:0,9,110	0/0:23,0:8:9.03:0,9,144	0/0:34,0:8:9.03:0,9,144	./.	0/1:22,3:7:11.21:282,0,11	1/1:17,8:10:18.06:383,18,0	./.
chr10	4021662	.	C	CATG	203.04	PASS	AB=0.643;AC=3;AF=0.088;AN=34;BaseQRankSum=-3.132;DP=1004;FS=3.677;HRun=0;HaplotypeScore=127.3375;InbreedingCoeff=0.4730;MQ=24.74;MQ0=366;MQRankSum=-2.245;QD=8.46;ReadPosRankSum=-1.606;VQSLOD=2.5196;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:7:3.01:0,3,48	./.	./.	./.	./.	0/0:18,0:12:9.03:0,9,144	0/0:54,0:15:6.02:0,6,96	./.	0/0:68,0:54:79.45:0,79,1157	0/0:72,0:26:63.19:0,63,966	./.	0/0:66,0:49:70.35:0,70,1097	0/0:69,0:52:80.90:0,81,1275	0/0:56,0:39:60.16:0,60,904	0/0:58,0:37:68.80:0,69,978	0/0:69,0:52:99:0,99,1580	./.	0/0:18,0:11:6.02:0,6,96	0/0:16,0:8:21.05:0,21,312	./.	0/0:90,0:45:57.15:0,57,869	0/0:41,0:13:3.01:0,3,48	./.	0/0:38,0:22:21.05:0,21,313	./.	1/1:15,0:6:5.96:43,6,0	0/1:4,4:8:2.02:249,0,2	./.
chr10	4022561	.	CGA	C	112.08	PASS	AB=0.986;AC=6;AF=0.273;AN=22;BaseQRankSum=0.555;DP=1796;FS=0.000;HRun=0;HaplotypeScore=29.1438;InbreedingCoeff=0.0066;MQ=9.43;MQ0=1199;MQRankSum=0.866;QD=0.19;ReadPosRankSum=0.866;VQSLOD=1.0936;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:164,3:18:39.82:40,0,112	0/0:13,0:4:3:0,3,36	./.	./.	./.	./.	./.	./.	./.	0/0:55,0:8:15.05:0,15,305	./.	./.	./.	./.	./.	./.	0/0:58,0:14:13.20:0,13,202	0/1:32,0:4:0:0,0,0	./.	0/0:43,0:14:21.07:0,21,423	./.	0/0:42,0:12:3.01:0,3,61	./.	./.	0/1:64,2:17:36.78:37,0,169	0/1:246,2:11:76.67:77,0,282	0/0:131,4:9:6.96:0,7,124	1/1:77,1:2:3.01:49,3,0
chr10	4022710	.	C	CACG	143.01	PASS	AB=0.994;AC=5;AF=0.156;AN=32;BaseQRankSum=2.421;DP=1113;FS=0.000;HRun=0;HaplotypeScore=46.8281;InbreedingCoeff=0.2444;MQ=11.97;MQ0=814;MQRankSum=-0.858;QD=0.66;ReadPosRankSum=1.620;VQSLOD=1.1730;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:50,5:10:3.01:70,3,0	./.	./.	./.	./.	0/0:31,0:8:6.02:0,6,106	./.	./.	0/0:64,0:7:6.02:0,6,105	0/0:53,0:12:27.01:0,27,406	./.	0/0:69,0:14:9.03:0,9,158	0/0:68,0:16:21.06:0,21,356	0/0:62,0:10:6.02:0,6,91	0/1:157,1:37:46.11:46,0,345	0/0:59,0:5:3.01:0,3,53	1/1:1,1:3:6.02:123,6,0	0/0:28,0:3:6.02:0,6,104	./.	0/0:28,0:14:12.04:0,12,211	./.	0/0:38,0:12:3.01:0,3,53	0/0:32,0:6:3.01:0,3,53	0/0:42,0:4:3.01:0,3,53	0/0:35,1:11:3.01:0,3,53	./.	./.	./.
chr10	4022808	.	C	CGA	172.68	PASS	AB=0.949;AC=5;AF=0.114;AN=44;BaseQRankSum=0.381;DP=1356;FS=0.000;HRun=0;HaplotypeScore=69.0337;InbreedingCoeff=0.1093;MQ=13.03;MQ0=939;MQRankSum=0.635;QD=0.42;ReadPosRankSum=-1.201;VQSLOD=1.3379;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:155,10:34:78.07:109,0,78	0/0:33,0:8:15.05:0,15,244	./.	./.	0/0:26,0:7:7.27:0,7,93	0/1:22,1:6:42.84:55,0,43	./.	./.	0/0:71,0:11:9.03:0,9,134	0/0:51,0:9:21.06:0,21,312	0/0:19,0:4:3.01:0,3,49	0/0:62,0:10:12:0,12,166	0/0:61,0:19:20.81:0,21,342	0/0:62,0:15:3.01:0,3,49	0/1:169,10:69:49.50:50,0,955	0/0:64,0:16:12.04:0,12,183	0/0:25,2:6:3.01:0,3,49	0/0:33,6:10:9.03:0,9,147	0/0:21,0:1:3.01:0,3,49	0/0:31,0:5:9.03:0,9,147	0/0:94,0:4:0:0,0,0	0/0:31,0:7:0:0,0,0	0/0:33,0:6:3.01:0,3,41	0/0:41,0:3:3.01:0,3,35	0/0:55,0:5:0:0,0,0	1/1:47,1:1:3.01:61,3,0	./.	./.
chr10	4023159	.	C	CGA	409.29	PASS	AB=0.936;AC=9;AF=0.180;AN=50;BaseQRankSum=3.534;DP=1440;DS;FS=15.469;HRun=0;HaplotypeScore=160.4270;InbreedingCoeff=0.1519;MQ=25.94;MQ0=611;MQRankSum=-3.947;QD=1.07;ReadPosRankSum=1.898;VQSLOD=1.9124;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:110,4:36:99:155,0,267	0/0:34,0:17:30.07:0,30,461	./.	./.	0/0:31,0:15:8.73:0,9,145	0/1:18,4:14:96.69:97,0,223	0/0:27,0:11:6.02:0,6,98	./.	0/0:54,0:42:90.31:0,90,1461	0/0:58,0:19:54.16:0,54,846	0/0:22,0:3:3.01:0,3,49	0/0:96,0:76:99:0,111,1778	0/0:58,0:47:90.31:0,90,1461	0/0:59,0:50:66.21:0,66,1043	0/0:143,1:88:99:0,105,1662	0/0:59,0:45:77.93:0,78,1222	0/1:51,3:13:48.70:49,0,134	0/0:42,0:26:62.55:0,63,948	0/0:31,0:16:45.14:0,45,710	0/0:36,0:15:39.13:0,39,635	0/0:115,0:67:99:0,123,1940	0/0:66,0:23:24.08:0,24,387	0/0:36,0:8:2.85:0,3,49	0/0:45,0:27:32.88:0,33,534	0/1:98,1:35:12.68:13,0,638	0/1:40,1:5:45.80:46,0,154	1/1:28,2:5:6.02:122,6,0	1/1:20,1:1:3.01:61,3,0
chr10	4024209	.	CGA	C	97.32	PASS	AB=0.949;AC=5;AF=0.104;AN=48;BaseQRankSum=4.902;DP=1506;DS;FS=23.992;HRun=0;HaplotypeScore=179.3920;InbreedingCoeff=0.5083;MQ=31.08;MQ0=313;MQRankSum=-3.672;QD=0.31;ReadPosRankSum=0.853;VQSLOD=0.6681;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:56,2:18:3.01:49,3,0	0/0:22,0:20:11.94:0,12,243	./.	./.	0/0:31,0:29:27.09:0,27,547	0/0:26,0:22:18.06:0,18,364	0/0:46,0:31:24.08:0,24,416	./.	0/0:72,0:69:93.32:0,93,1844	0/0:62,0:46:99:0,132,2663	0/0:24,0:21:6.02:0,6,109	0/0:71,0:61:87.30:0,87,1761	0/0:73,0:73:80.89:0,81,1595	0/0:66,0:64:78.25:0,78,1579	0/1:210,12:120:99:136,0,2627	0/0:79,0:78:87.30:0,87,1743	0/0:44,2:13:12.04:0,12,243	0/0:91,2:57:23.28:0,23,1252	0/0:23,0:15:39.13:0,39,761	0/0:37,0:33:54.19:0,54,1080	0/0:100,0:89:99:0,117,2367	0/0:32,0:28:21.07:0,21,426	0/0:24,0:24:15.05:0,15,304	0/0:30,0:29:39.01:0,39,770	0/0:125,2:79:96.29:0,96,1898	0/0:52,1:9:24.08:0,24,486	1/1:31,0:6:2.68:11,3,0	./.
chr10	4024311	.	CGA	C	57.19	PASS	AB=1.000;AC=5;AF=0.167;AN=30;BaseQRankSum=0.178;DP=1285;FS=0.000;HRun=0;HaplotypeScore=36.6799;InbreedingCoeff=0.4930;MQ=15.32;MQ0=676;MQRankSum=0.801;QD=0.42;ReadPosRankSum=-0.845;VQSLOD=1.1684;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:95,0:13:3:0,3,61	./.	./.	./.	0/1:20,0:8:0:0,0,0	./.	./.	./.	0/0:78,0:35:3.01:0,3,61	0/0:49,0:13:24.08:0,24,487	0/1:12,0:6:0:0,0,0	1/1:10,22:7:9.03:135,9,0	0/1:71,0:23:0.14:0,0,0	0/0:67,0:33:3.01:0,3,61	0/0:156,3:16:9.03:0,9,182	./.	./.	0/0:24,0:5:12.01:0,12,201	0/0:20,0:7:21.07:0,21,423	0/0:28,0:15:9.03:0,9,182	0/0:82,0:33:18.06:0,18,364	./.	./.	./.	./.	0/0:72,0:12:27.09:0,27,547	0/0:56,0:9:0:0,0,0	./.
chr10	4025002	.	C	CGA	159.83	PASS	AB=1.000;AC=3;AF=0.075;AN=40;BaseQRankSum=1.573;DP=1364;FS=0.000;HRun=0;HaplotypeScore=34.4788;InbreedingCoeff=0.4371;MQ=15.70;MQ0=791;MQRankSum=-0.771;QD=1.63;ReadPosRankSum=2.835;VQSLOD=0.8168;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:18,0:10:11.84:0,12,195	./.	./.	0/0:35,0:14:15.05:0,15,242	0/0:34,0:7:3.01:0,3,49	./.	./.	0/1:70,0:25:0:0,0,0	0/0:63,0:19:54.15:0,54,830	0/0:19,0:13:12.04:0,12,186	0/0:50,0:17:8.55:0,9,146	0/0:67,0:17:8.64:0,9,147	0/0:60,0:21:6.02:0,6,98	0/0:162,0:23:3.01:0,3,49	0/0:72,0:26:21.07:0,21,342	0/0:6,0:1:3.01:0,3,49	0/0:55,0:11:0:0,0,0	0/0:29,0:5:15:0,15,191	0/0:42,0:24:24.08:0,24,386	./.	0/0:49,0:22:27.09:0,27,435	0/0:31,0:9:6.02:0,6,98	0/0:38,0:14:3:0,3,49	./.	0/0:80,1:10:30.08:0,30,458	./.	1/1:22,6:6:12.04:243,12,0
chr10	4025304	.	CAA	C	940.78	PASS	AB=0.719;AC=6;AF=0.107;AN=56;BaseQRankSum=6.663;DP=773;FS=5.633;HRun=2;HaplotypeScore=100.5446;InbreedingCoeff=0.5968;MQ=48.75;MQ0=85;MQRankSum=-4.120;QD=11.76;ReadPosRankSum=1.933;VQSLOD=0.8758;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:44.76:0,45,694	0/0:16,0:16:45.15:0,45,862	0/0:21,5:2:6.02:0,6,122	0/1:45,4:7:29.05:29,0,182	0/0:18,0:18:51:0,51,850	0/0:23,0:19:57.04:0,57,990	0/0:23,0:22:66.19:0,66,1295	0/0:40,0:26:75.24:0,75,1468	0/0:40,0:40:99:0,120,2386	0/0:26,0:25:75.24:0,75,1439	0/0:8,0:8:23.73:0,24,237	0/0:32,0:31:72.09:0,72,1318	0/0:48,0:48:99:0,123,2283	0/0:40,0:40:99:0,108,2064	0/0:67,0:65:99:0,171,3108	0/0:47,0:47:99:0,102,1977	0/0:27,0:26:42.11:0,42,790	0/0:13,0:13:36.11:0,36,694	0/0:18,0:10:30.10:0,30,608	0/0:15,0:14:42.06:0,42,764	0/0:57,0:56:99:0,156,2939	0/0:17,0:16:44.85:0,45,628	0/0:13,0:13:36.08:0,36,656	0/0:42,0:42:99:0,123,2372	0/0:21,0:20:60.20:0,60,1156	0/1:1,8:9:33.85:364,0,34	1/1:0,13:10:21.07:341,21,0	1/1:1,7:7:21.07:342,21,0
chr10	4030110	.	CCGA	C	1774.74	PASS	AB=0.604;AC=7;AF=0.125;AN=56;BaseQRankSum=9.776;DP=703;FS=18.898;HRun=0;HaplotypeScore=106.2590;InbreedingCoeff=0.9032;MQ=79.38;MQ0=0;MQRankSum=-4.237;QD=25.00;ReadPosRankSum=-1.045;VQSLOD=2.2596;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,129,2681	0/0:6,0:6:18.06:0,18,348	0/0:24,0:24:50.88:0,51,866	0/0:15,0:15:35.87:0,36,706	0/0:14,0:14:33.11:0,33,682	0/0:24,0:24:63.22:0,63,1351	0/0:43,0:43:99:0,117,2486	1/1:7,9:16:27.09:413,27,0	0/0:19,0:19:54.18:0,54,1089	0/0:23,0:23:63.22:0,63,1323	0/0:16,0:16:33.11:0,33,708	0/0:29,0:29:75.24:0,75,1559	0/0:29,0:29:81.26:0,81,1697	0/0:42,0:42:99:0,111,2309	0/0:29,0:29:66.23:0,66,1359	0/0:26,0:26:75.25:0,75,1534	0/0:2,0:33:84.28:0,84,1132	0/0:48,0:46:99:0,129,2684	0/0:17,0:17:51.17:0,51,1039	0/0:25,0:25:57.20:0,57,1222	0/0:49,0:49:99:0,126,2585	0/0:14,0:14:36.12:0,36,730	0/0:11,0:11:33.11:0,33,698	0/0:34,0:34:93.32:0,93,1992	0/0:18,0:18:42.14:0,42,880	0/1:10,19:29:1.27:772,0,1	1/1:5,14:19:33.11:506,33,0	1/1:2,5:7:15.05:230,15,0
chr10	4031409	.	G	GC	726.19	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-6.588;DP=525;FS=1.753;HRun=5;HaplotypeScore=51.5217;InbreedingCoeff=0.9048;MQ=71.47;MQ0=0;MQRankSum=-0.723;QD=25.94;ReadPosRankSum=-3.853;VQSLOD=1.4441;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,99,1048	0/0:8,0:8:21.04:0,21,218	0/0:19,0:19:48.09:0,48,496	0/0:20,0:20:51.12:0,51,545	0/0:12,0:12:33.08:0,33,353	0/0:13,0:13:36.08:0,36,387	0/0:30,0:30:84.20:0,84,895	1/1:6,22:28:66.18:821,66,0	0/0:23,0:23:69.15:0,69,731	0/0:14,0:14:33.06:0,33,340	0/0:8,0:8:18.03:0,18,182	0/0:22,0:22:66.14:0,66,699	0/0:24,0:24:66.11:0,66,694	0/0:22,0:22:60.12:0,60,633	0/0:15,0:15:42.11:0,42,451	0/0:14,0:14:42.11:0,42,451	0/0:35,0:35:99:0,105,1119	0/0:25,0:25:66.16:0,66,709	0/0:15,0:15:42.11:0,42,450	0/0:10,0:10:27.07:0,27,289	0/0:43,0:43:99:0,117,1233	0/0:9,0:9:27.05:0,27,282	0/0:6,0:6:12.01:0,12,121	0/0:24,0:24:48.08:0,48,505	0/0:14,0:14:36.07:0,36,377	0/0:11,0:11:27.06:0,27,284	0/0:22,0:22:57.10:0,57,588	0/0:3,0:3:9.02:0,9,97
chr10	4031689	.	AAAATAAAT	A	1565.78	PASS	AB=1.000;AC=8;AF=0.154;AN=52;BaseQRankSum=2.793;DP=345;FS=5.026;HRun=0;HaplotypeScore=90.9684;InbreedingCoeff=0.4633;MQ=51.67;MQ0=11;MQRankSum=-7.421;QD=12.33;ReadPosRankSum=-0.844;VQSLOD=1.8549;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:40,0:40:23.60:24,0,1788	0/0:5,0:5:9.02:0,9,241	./.	0/0:6,0:2:6.02:0,6,71	0/0:16,0:15:33.11:0,33,862	0/0:17,0:15:33.11:0,33,1161	0/0:4,0:4:9.03:0,9,272	0/1:30,0:27:99:409,0,107	0/0:2,0:2:3.01:0,3,119	0/0:15,0:15:33.11:0,33,1163	0/0:13,0:12:18.05:0,18,495	0/0:6,0:6:6.02:0,6,233	0/0:5,0:5:9.03:0,9,286	0/0:4,0:4:9.03:0,9,341	1/1:1,8:9:15.05:383,15,0	0/0:13,0:13:21.06:0,21,611	0/0:5,0:26:20.81:0,21,584	1/1:13,15:27:15.05:358,15,0	0/0:20,0:18:33.05:0,33,939	0/0:13,0:11:9.03:0,9,372	0/0:6,0:6:12.04:0,12,389	0/0:4,0:4:3.01:0,3,125	0/0:6,0:6:6.02:0,6,220	./.	1/1:8,12:20:21.07:536,21,0	0/0:6,0:9:21.07:0,21,499	0/0:2,0:5:3.01:0,3,105	0/0:6,0:18:9:0,9,232
chr10	4032343	.	AAAGGAAAGG	A	3444.96	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=10.023;DP=827;FS=2.034;HRun=0;HaplotypeScore=220.3173;InbreedingCoeff=0.9971;MQ=68.58;MQ0=2;MQRankSum=-9.474;QD=51.42;ReadPosRankSum=0.924;VQSLOD=3.2067;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:62,0:62:99:0,163,5883	0/0:9,0:9:24.07:0,24,928	0/0:51,0:38:72.87:0,73,2416	0/0:66,0:36:21.31:0,21,1862	0/0:31,0:31:93.28:0,93,3844	0/0:25,0:25:69.24:0,69,3167	0/0:27,0:27:81.25:0,81,3271	0/0:20,0:20:57.19:0,57,2110	0/0:32,0:32:93.32:0,93,4354	0/0:31,0:31:90.18:0,90,3423	0/0:20,0:20:60.20:0,60,2591	0/0:32,0:32:90.25:0,90,3595	0/0:26,0:26:75.26:0,75,3248	0/0:35,0:35:99:0,102,4454	1/1:0,27:27:54.19:1634,54,0	0/0:30,0:29:90.30:0,90,3837	0/0:34,0:34:99:0,99,4175	1/1:1,14:15:24.01:654,24,0	0/0:13,0:13:36.12:0,36,1280	0/0:33,0:33:96.33:0,96,4297	0/0:17,0:17:45.15:0,45,1922	0/0:24,0:24:66.13:0,66,2767	0/0:27,0:27:77.96:0,78,3219	0/0:33,0:33:90.23:0,90,3454	1/1:3,22:25:39.13:1157,39,0	0/0:36,0:36:99:0,105,4813	0/0:30,0:30:90.26:0,90,3809	0/0:16,0:16:48.15:0,48,2056
chr10	4039460	.	TGAG	T	1073	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.911;DP=759;FS=5.257;HRun=0;HaplotypeScore=105.0557;InbreedingCoeff=0.9953;MQ=77.65;MQ0=0;MQRankSum=-3.741;QD=38.32;ReadPosRankSum=-2.875;VQSLOD=3.4449;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,141,3193	0/0:10,0:10:30.10:0,30,662	0/0:27,0:27:75.25:0,75,1593	0/0:18,0:18:48.15:0,48,1001	0/0:22,0:22:57.20:0,57,1272	0/0:23,0:23:69.22:0,69,1520	0/0:39,0:39:99:0,114,2482	1/1:3,25:28:72.22:1168,72,0	0/0:29,0:29:84.25:0,84,1805	0/0:23,0:23:60.20:0,60,1319	0/0:14,0:14:39.11:0,39,797	0/0:36,0:36:99:0,102,2300	0/0:32,0:32:93.30:0,93,2026	0/0:38,0:38:99:0,111,2446	0/0:42,0:42:99:0,126,2729	0/0:28,0:28:81.28:0,81,1836	0/0:24,0:24:69.20:0,69,1473	0/0:19,0:19:54.19:0,54,1214	0/0:24,0:24:72.24:0,72,1587	0/0:13,0:13:36.12:0,36,812	0/0:59,0:59:99:0,175,3839	0/0:22,0:22:60.21:0,60,1340	0/0:21,0:21:57.17:0,57,1190	0/0:35,0:35:99:0,99,2195	0/0:26,0:26:69.23:0,69,1505	0/0:30,0:30:84.27:0,84,1792	0/0:20,0:20:57.18:0,57,1184	0/0:8,0:8:21.07:0,21,476
chr10	4040465	.	T	TGAGAGA	252.38	PASS	AB=1.000;AC=8;AF=0.154;AN=52;BaseQRankSum=1.524;DP=603;FS=35.147;HRun=0;HaplotypeScore=166.8287;InbreedingCoeff=0.1960;MQ=46.97;MQ0=25;MQRankSum=-0.567;QD=2.58;ReadPosRankSum=0.715;VQSLOD=1.4728;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:18:15.05:0,15,218	0/0:11,0:11:6:0,6,107	./.	./.	0/0:29,0:29:15.05:0,15,291	0/0:25,0:24:1.07:0,1,160	0/0:32,0:29:17.33:0,17,298	0/0:23,0:18:5.91:0,6,40	0/0:27,0:26:7.41:0,7,390	0/0:25,0:22:26.95:0,27,442	0/0:10,0:10:15.02:0,15,210	0/1:31,0:31:14.48:14,0,311	0/1:16,0:16:15.86:138,0,16	0/0:23,0:23:20.59:0,21,316	0/0:10,11:25:3.01:0,3,60	0/0:35,0:35:16.97:0,17,598	0/0:13,0:11:2.95:0,3,41	1/1:12,0:10:6.02:108,6,0	0/0:14,0:12:15:0,15,235	0/0:18,0:18:17.40:0,17,345	0/0:43,0:43:38.56:0,39,643	0/0:29,0:28:18.45:0,18,301	0/1:17,0:16:7.28:7,0,105	0/0:49,0:45:39.16:0,39,731	1/1:15,0:14:6.01:95,6,0	0/0:28,0:26:20.78:0,21,272	0/0:19,0:18:5.83:0,6,53	0/1:7,0:5:14.78:15,0,34
chr10	4040497	.	AGAGAGAGAGT	A	929.07	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=6.406;DP=683;FS=0.000;HRun=0;HaplotypeScore=199.7340;InbreedingCoeff=0.0974;MQ=51.58;MQ0=20;MQRankSum=-3.580;QD=7.94;ReadPosRankSum=-0.733;VQSLOD=1.7624;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:16,0:13:6.48:6,0,279	0/0:11,0:11:14.58:0,15,374	0/0:22,0:11:16.33:0,16,195	0/0:41,0:23:43.76:0,44,585	0/0:18,0:18:29.85:0,30,891	0/0:25,0:25:36.24:0,36,759	0/0:32,0:30:35.53:0,36,1125	0/1:36,0:35:99:223,0,168	0/0:31,0:31:44.28:0,44,1370	0/0:27,0:27:59.88:0,60,1632	0/0:17,0:17:38.91:0,39,523	0/0:27,0:27:53.42:0,53,1345	0/0:20,0:20:35.95:0,36,1197	0/0:22,0:22:47.56:0,48,887	0/0:28,0:28:32.93:0,33,578	0/0:31,0:31:73.71:0,74,2104	1/1:2,13:14:2.98:95,3,0	0/0:7,0:5:12.01:0,12,374	0/0:23,0:20:57.73:0,58,1186	0/0:19,0:19:44.83:0,45,1018	0/0:49,0:49:99:0,103,1925	0/0:25,0:24:50.38:0,50,863	0/0:18,0:17:20.86:0,21,357	0/0:47,0:44:65.88:0,66,2020	0/0:26,0:26:34.59:0,35,608	0/1:26,0:25:33.73:541,0,34	0/1:17,0:16:29.08:80,0,29	0/1:7,0:5:20.57:107,0,21
chr10	4040505	.	AGTGAGAGT	A	1634.30	PASS	AB=1.000;AC=8;AF=0.143;AN=56;BaseQRankSum=6.009;DP=701;FS=2.560;HRun=0;HaplotypeScore=182.6101;InbreedingCoeff=0.6754;MQ=56.01;MQ0=16;MQRankSum=-3.011;QD=15.27;ReadPosRankSum=-1.478;VQSLOD=2.8586;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:16:13.35:0,13,193	0/0:8,0:9:16.20:0,16,348	0/0:29,0:18:41.80:0,42,832	0/0:51,0:32:62.09:0,62,1426	0/0:16,0:16:33.11:0,33,934	0/0:25,0:25:46.38:0,46,938	0/0:31,0:30:54.26:0,54,1370	0/1:39,0:38:15.84:16,0,694	0/0:30,0:31:62.33:0,62,1540	0/0:28,0:28:78.54:0,79,1795	0/0:18,0:18:42.14:0,42,716	0/0:25,0:26:31.72:0,32,1261	0/0:22,0:22:57.01:0,57,1315	0/0:19,0:19:27.41:0,27,1007	0/0:31,0:31:48.16:0,48,988	0/0:31,0:31:80.08:0,80,2145	0/1:14,0:13:13.85:51,0,14	0/0:9,0:7:18.06:0,18,446	0/0:25,0:23:63.21:0,63,1440	0/0:18,0:18:47.99:0,48,1193	0/0:49,0:49:73.69:0,74,2133	0/0:20,0:19:47.89:0,48,980	0/0:15,0:14:26.67:0,27,459	0/0:48,0:46:68.08:0,68,1942	0/0:24,0:24:39.30:0,39,877	1/1:5,21:25:54.07:1100,54,0	1/1:3,14:16:8.57:177,9,0	1/1:11,0:10:11.83:436,12,0
chr10	4040642	.	G	GTCCATCCATCCTTCCT	2329.58	PASS	AB=0.994;AC=10;AF=0.179;AN=56;BaseQRankSum=8.132;DP=749;FS=2.779;HRun=0;HaplotypeScore=315.6516;InbreedingCoeff=0.2504;MQ=63.03;MQ0=1;MQRankSum=-4.384;QD=9.43;ReadPosRankSum=-4.429;VQSLOD=1.3873;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:7,15:31:15.05:781,15,0	0/0:6,0:6:18.06:0,18,687	0/0:24,0:22:55.58:0,56,1353	0/0:23,0:16:36.09:0,36,758	0/0:16,0:16:45.13:0,45,1539	0/0:24,0:24:60.19:0,60,1791	0/0:32,0:32:87.28:0,87,2456	1/1:51,0:50:74.67:814,75,0	0/0:36,0:36:90.31:0,90,3205	0/0:20,0:20:60.16:0,60,2036	0/0:20,0:20:60.21:0,60,1932	0/0:36,0:36:93.31:0,93,2923	0/0:23,0:23:63.20:0,63,2400	0/0:38,0:38:99:0,111,3665	0/1:38,0:38:99:448,0,823	0/0:33,0:33:96.32:0,96,3355	0/1:32,0:32:99:112,0,1291	0/1:18,0:17:80.79:81,0,350	0/0:17,0:17:48.16:0,48,1598	0/0:11,0:11:33.07:0,33,717	0/0:54,0:54:99:0,150,4642	0/0:24,0:24:69.24:0,69,2713	0/0:17,0:17:42.14:0,42,1232	0/0:43,0:43:99:0,117,4508	0/1:24,0:25:99:194,0,479	0/1:26,0:26:43.80:44,0,892	0/1:26,0:26:10.11:10,0,768	0/0:5,0:5:3.90:0,4,105
chr10	4040659	.	TCCTC	T	2780.32	PASS	AB=1.000;AC=12;AF=0.214;AN=56;BaseQRankSum=6.574;DP=735;FS=0.000;HRun=0;HaplotypeScore=129.7055;InbreedingCoeff=0.3124;MQ=57.24;MQ0=5;MQRankSum=0.090;QD=12.04;ReadPosRankSum=-6.044;VQSLOD=0.3523;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:24:86.48:123,0,86	0/0:7,0:7:21.04:0,21,400	0/0:24,0:16:28.56:0,29,266	0/0:19,0:10:24:0,24,255	0/0:19,0:19:57.02:0,57,1074	0/0:22,0:22:62.75:0,63,1079	0/0:33,0:33:90.04:0,90,1424	0/1:39,0:37:63.79:504,0,64	0/0:42,0:42:99:0,114,2077	0/0:20,0:20:57.15:0,57,1183	0/0:20,0:20:19.93:0,20,890	0/0:38,0:38:96.12:0,96,1785	0/0:22,0:22:60.15:0,60,1368	0/0:36,0:36:99:0,108,2148	0/1:35,0:35:99:318,0,312	0/0:38,0:38:99:0,111,1951	0/1:32,0:32:99:259,0,282	0/1:19,0:18:99:145,0,142	0/0:20,0:19:56.98:0,57,945	0/0:12,0:12:33.06:0,33,609	0/0:43,0:43:99:0,111,2202	0/0:26,0:26:71.65:0,72,1492	0/0:16,0:15:35.83:0,36,613	0/0:47,0:47:99:0,137,2732	0/1:24,0:24:99:216,0,202	1/1:3,22:25:42:822,42,0	1/1:3,21:24:26.94:499,27,0	1/1:1,8:9:3.01:57,3,0
chr10	4043376	.	C	CCA	2453.58	PASS	AB=0.568;AC=4;AF=0.071;AN=56;BaseQRankSum=-9.431;DP=891;FS=3.068;HRun=0;HaplotypeScore=102.1572;InbreedingCoeff=0.6162;MQ=71.34;MQ0=3;MQRankSum=-1.233;QD=29.56;ReadPosRankSum=0.876;VQSLOD=4.8413;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:57:99:0,141,1691	0/0:11,0:11:21.07:0,21,260	0/0:39,0:38:67.99:0,68,792	0/0:32,0:29:26.88:0,27,634	0/0:45,0:45:99:0,111,1376	0/0:28,0:28:72.21:0,72,879	0/0:51,0:51:99:0,123,1498	0/0:37,0:37:75.23:0,75,919	0/0:22,0:23:50.99:0,51,609	0/0:30,0:30:63.19:0,63,771	0/0:27,0:27:69.22:0,69,852	0/0:31,0:31:75.24:0,75,930	0/0:20,0:20:60.18:0,60,731	0/0:25,0:25:57.18:0,57,707	0/0:44,0:44:99:0,120,1477	0/0:38,0:38:99:0,99,1193	0/0:33,0:33:87.27:0,87,1078	0/0:26,0:26:69.18:0,69,823	0/0:22,0:22:51.13:0,51,608	0/0:20,0:20:42.12:0,42,509	0/0:42,0:41:75.22:0,75,917	0/0:32,0:32:87.27:0,87,1079	0/0:26,0:26:57.17:0,57,695	0/0:45,0:45:99:0,123,1496	0/0:22,0:22:51.16:0,51,632	0/1:8,27:34:58.53:1178,0,59	1/1:6,22:28:54.18:886,54,0	0/1:5,15:20:1.08:505,0,1
chr10	4043613	.	GC	G	1498.06	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.717;DP=716;FS=3.996;HRun=1;HaplotypeScore=68.3939;InbreedingCoeff=0.9920;MQ=65.90;MQ0=0;MQRankSum=0.326;QD=39.42;ReadPosRankSum=-3.323;VQSLOD=2.9321;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,106,1631	0/0:6,0:6:18.06:0,18,287	0/0:19,0:18:51.09:0,51,784	0/0:20,0:16:48.13:0,48,725	0/0:26,0:26:78.25:0,78,1221	0/0:16,0:16:45.15:0,45,719	0/0:31,0:31:90.29:0,90,1413	1/1:0,38:38:99:1593,114,0	0/0:28,0:28:84.29:0,84,1332	0/0:30,0:29:90.30:0,90,1420	0/0:23,0:23:66.22:0,66,1043	0/0:24,0:24:72.25:0,72,1151	0/0:18,0:18:54.16:0,54,838	0/0:21,0:21:63.20:0,63,984	0/0:26,0:26:72.25:0,72,1151	0/0:23,0:23:69.24:0,69,1103	0/0:24,0:24:72.22:0,72,1123	0/0:24,0:24:69.19:0,69,1075	0/0:33,0:33:95.89:0,96,1509	0/0:28,0:28:84.29:0,84,1341	0/0:58,0:58:99:0,172,2708	0/0:19,0:19:54.18:0,54,863	0/0:22,0:22:66.22:0,66,1047	0/0:26,0:26:78.27:0,78,1247	0/0:20,0:20:60.20:0,60,959	0/0:33,0:33:96.32:0,96,1514	0/0:20,0:20:57.19:0,57,911	0/0:22,0:22:66.23:0,66,1055
chr10	4043783	.	TC	T	1282.51	PASS	AC=6;AF=0.111;AN=54;BaseQRankSum=2.422;DP=425;FS=3.026;HRun=4;HaplotypeScore=55.2080;InbreedingCoeff=0.9309;MQ=47.23;MQ0=24;MQRankSum=-0.260;QD=28.50;ReadPosRankSum=0.994;VQSLOD=3.1726;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:29:69.12:0,69,898	0/0:6,0:6:18.04:0,18,234	./.	0/0:11,0:1:0:0,0,0	0/0:15,0:14:33.10:0,33,444	0/0:13,0:13:24.08:0,24,334	0/0:29,0:29:60.18:0,60,814	0/0:20,0:20:48.08:0,48,628	0/0:9,0:9:21.07:0,21,291	0/0:22,0:22:65.99:0,66,831	0/0:16,0:16:36.12:0,36,502	0/0:10,0:10:30.10:0,30,420	0/0:11,0:10:18.06:0,18,251	0/0:9,0:9:21.03:0,21,270	0/0:19,0:19:35.95:0,36,503	0/0:13,0:13:30.10:0,30,420	0/0:17,0:16:29.61:0,30,397	0/0:21,0:20:39.13:0,39,545	0/0:15,0:13:30.10:0,30,418	0/0:16,0:15:33.11:0,33,460	0/0:14,0:12:30.10:0,30,419	0/0:14,0:13:39.13:0,39,546	0/0:12,0:12:27.05:0,27,354	0/0:13,0:11:15.52:0,16,211	0/0:11,0:11:30.08:0,30,401	1/1:0,16:16:48.11:560,48,0	1/1:2,13:15:42.13:503,42,0	1/1:3,11:12:30.09:360,30,0
chr10	4044932	.	T	TTCCTCC	1887.82	PASS	AB=1.000;AC=16;AF=0.286;AN=56;BaseQRankSum=9.360;DP=704;FS=10.294;HRun=0;HaplotypeScore=156.1751;InbreedingCoeff=0.5819;MQ=64.19;MQ0=8;MQRankSum=-4.978;QD=9.30;ReadPosRankSum=-3.857;VQSLOD=1.0545;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:24,5:29:30.09:701,30,0	0/0:9,0:9:24.06:0,24,400	0/1:30,0:23:16.31:16,0,130	0/0:15,0:11:9.03:0,9,138	0/0:22,0:22:45.13:0,45,844	0/0:26,0:26:57:0,57,991	0/0:36,0:37:63.72:0,64,1347	1/1:42,0:41:47.29:602,47,0	0/0:37,0:35:75.25:0,75,1447	0/0:29,0:29:68.90:0,69,1305	0/0:17,0:17:36.12:0,36,764	0/0:29,0:29:57.18:0,57,1097	0/0:32,0:31:66.20:0,66,1305	0/0:29,0:29:63.18:0,63,1159	0/1:17,0:16:23.18:23,0,160	0/0:19,0:19:42.12:0,42,761	1/1:25,0:24:42.21:503,42,0	0/1:15,0:13:14.51:15,0,56	0/0:21,0:17:27.03:0,27,435	0/0:16,0:16:33.01:0,33,601	0/0:67,0:66:99:0,137,2509	0/0:24,0:23:63.20:0,63,1265	0/0:19,0:19:42.14:0,42,843	0/0:52,0:52:67.75:0,68,1874	1/1:21,0:21:14.24:109,14,0	0/1:15,0:15:49.97:50,0,52	1/1:6,0:6:5.88:37,6,0	1/1:3,0:2:2.17:16,2,0
chr10	4044947	.	CTCCTCT	C	1863.05	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=8.921;DP=697;FS=6.300;HRun=0;HaplotypeScore=145.2220;InbreedingCoeff=0.3087;MQ=53.93;MQ0=22;MQRankSum=-4.423;QD=10.29;ReadPosRankSum=-4.263;VQSLOD=0.9214;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:23:99:309,0,164	0/0:9,0:9:24.07:0,24,628	0/1:28,0:10:12.21:12,0,137	0/0:23,0:7:9.50:0,10,139	0/0:21,0:21:54.14:0,54,1378	0/0:28,0:28:74.86:0,75,1746	0/0:38,0:37:81.69:0,82,2191	1/1:18,21:34:44.48:828,44,0	0/0:41,0:39:99:0,99,2467	0/0:33,0:33:93.05:0,93,2395	0/0:15,0:15:42.12:0,42,1264	0/0:28,0:28:78.19:0,78,2029	0/0:32,0:32:88.39:0,88,2365	0/0:32,0:32:93.22:0,93,2317	0/1:14,0:13:20.21:20,0,279	0/0:18,0:18:51.14:0,51,1226	1/1:19,3:19:43.24:636,43,0	0/1:13,0:11:14.51:15,0,84	0/0:22,0:13:36.02:0,36,675	0/0:13,0:13:33.03:0,33,1002	0/0:66,0:64:99:0,169,4350	0/0:28,0:27:81.20:0,81,2172	0/0:19,0:19:51.10:0,51,1420	0/0:49,0:49:82.08:0,82,3125	1/1:19,0:19:20.06:141,20,0	0/1:15,0:15:31.12:31,0,175	0/1:4,0:4:12.11:28,0,12	0/1:4,0:2:13.84:14,0,21
chr10	4044974	.	C	CTCT	737.64	PASS	AB=1.000;AC=9;AF=0.167;AN=54;BaseQRankSum=8.563;DP=626;FS=0.000;HRun=0;HaplotypeScore=106.5019;InbreedingCoeff=0.5559;MQ=49.81;MQ0=27;MQRankSum=-8.537;QD=9.34;ReadPosRankSum=-2.620;VQSLOD=2.3527;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:14,8:21:18.75:490,19,0	0/0:7,0:7:15.05:0,15,229	0/0:32,0:5:1.74:0,2,63	0/0:39,0:4:5.83:0,6,70	0/0:19,0:19:51.10:0,51,671	0/0:27,0:27:63.16:0,63,877	0/0:27,0:26:57.07:0,57,735	1/1:34,0:28:2.62:306,3,0	0/0:37,0:35:95.71:0,96,1270	0/0:38,0:38:98.47:0,98,1244	0/0:21,0:19:51.11:0,51,678	0/0:31,0:31:75.12:0,75,1030	0/0:29,0:29:81.19:0,81,1174	0/0:33,0:33:81.09:0,81,1109	0/0:7,0:7:11.99:0,12,156	0/0:18,0:18:48.10:0,48,664	1/1:15,0:13:2.84:53,3,0	0/0:4,0:4:2.99:0,3,24	0/0:20,0:12:31.64:0,32,423	0/0:12,0:12:30.09:0,30,439	0/0:49,0:47:99:0,101,1543	0/0:26,0:26:51.12:0,51,742	0/0:22,0:22:63.05:0,63,802	0/0:44,0:43:96.33:0,96,1337	0/0:4,0:4:6.02:0,6,90	0/1:6,0:6:10.08:10,0,40	1/1:1,0:2:0.47:1,0,0	./.
chr10	4045003	.	T	TTCCTCC	1092.02	PASS	AB=1.000;AC=9;AF=0.167;AN=54;BaseQRankSum=2.855;DP=527;FS=10.550;HRun=0;HaplotypeScore=120.4402;InbreedingCoeff=0.4541;MQ=49.76;MQ0=25;MQRankSum=-7.146;QD=14.18;ReadPosRankSum=-1.107;VQSLOD=2.3028;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:26:88.74:89,0,164	0/0:7,0:7:17.93:0,18,326	0/0:12,0:2:2.87:0,3,27	0/0:18,0:2:2.98:0,3,21	0/0:17,0:17:42.08:0,42,774	0/0:21,0:21:57.17:0,57,1158	0/0:24,0:24:38.75:0,39,615	0/0:29,0:16:20.47:0,20,186	0/0:31,0:30:77.51:0,78,1540	0/0:28,0:27:69.21:0,69,1313	0/0:17,0:15:33.10:0,33,676	0/0:25,0:24:54.18:0,54,1107	0/0:24,0:22:30.18:0,30,837	0/0:26,0:26:69.21:0,69,1390	1/1:3,4:6:9.03:234,9,0	0/0:19,0:19:54.17:0,54,1105	0/1:12,0:12:43.56:44,0,61	1/1:1,4:4:6.02:202,6,0	0/0:23,0:16:39.10:0,39,672	0/0:14,0:14:30.10:0,30,613	0/0:40,0:40:81.18:0,81,1512	0/0:23,0:22:42.12:0,42,834	0/0:18,0:16:36.12:0,36,765	0/0:33,0:32:69.18:0,69,1262	1/1:4,12:15:20.66:598,21,0	0/1:8,0:7:53.15:70,0,53	0/0:1,0:1:3.01:0,3,65	./.
chr10	4045015	.	CTCT	C	402.60	PASS	AB=0.975;AC=5;AF=0.093;AN=54;BaseQRankSum=6.610;DP=515;FS=18.693;HRun=0;HaplotypeScore=96.8132;InbreedingCoeff=0.3526;MQ=49.97;MQ0=17;MQRankSum=-4.014;QD=5.10;ReadPosRankSum=-2.114;VQSLOD=0.0110;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:26:99:133,0,185	0/0:6,0:6:14.88:0,15,264	0/1:14,0:2:0:0,0,0	0/0:20,0:8:20.89:0,21,182	0/0:16,0:16:42.09:0,42,747	0/0:21,0:21:60.16:0,60,1165	0/0:22,0:22:51.06:0,51,902	0/1:23,2:14:99:149,0,114	0/0:30,0:29:66.93:0,67,1448	0/0:32,0:31:78.16:0,78,1282	0/0:17,0:15:39.10:0,39,774	0/0:22,1:22:60.16:0,60,1064	0/0:24,0:22:50.77:0,51,864	0/0:25,0:25:68.39:0,68,1280	0/0:5,0:4:2.99:0,3,124	0/0:20,0:20:55.99:0,56,1153	1/1:9,4:12:16.15:231,16,0	0/0:4,0:3:9:0,9,113	0/0:21,0:14:42.12:0,42,869	0/0:14,0:14:36.05:0,36,667	0/0:34,0:34:86.93:0,87,1550	0/0:20,0:19:48.03:0,48,887	0/0:15,0:14:36.11:0,36,737	0/0:34,0:34:75.12:0,75,1304	0/0:18,0:16:10.08:0,10,210	0/0:10,0:9:1.29:0,1,193	0/0:3,0:3:9:0,9,104	./.
chr10	4047182	.	CAAGAAGA	C	1594.08	PASS	AB=0.659;AC=5;AF=0.093;AN=54;BaseQRankSum=8.217;DP=705;FS=0.000;HRun=0;HaplotypeScore=166.4049;InbreedingCoeff=0.6784;MQ=63.41;MQ0=2;MQRankSum=-6.561;QD=22.77;ReadPosRankSum=0.150;VQSLOD=3.3448;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:75.21:0,75,2667	0/0:9,0:9:21.07:0,21,781	0/0:26,0:23:12.07:0,12,485	0/0:15,0:10:6:0,6,150	0/0:29,0:29:63.22:0,63,2156	0/0:19,0:18:39.13:0,39,1359	0/0:30,0:30:42.13:0,42,1456	1/1:16,1:17:6.02:120,6,0	0/0:23,0:23:48.16:0,48,1645	0/0:32,0:32:60.20:0,60,2097	0/0:23,0:23:48.16:0,48,1718	0/0:26,0:26:51.18:0,51,1859	0/0:19,0:19:39.13:0,39,1391	0/0:13,0:13:21.07:0,21,772	0/0:25,0:25:54.16:0,54,1827	0/0:30,0:30:54.18:0,54,1970	0/0:45,0:44:84.41:0,84,3436	0/0:30,0:30:62.23:0,62,2064	0/0:19,0:19:24.08:0,24,763	0/0:33,0:33:81.28:0,81,2748	0/0:20,0:20:39.13:0,39,1402	0/0:23,0:23:36.12:0,36,1331	0/0:31,0:31:48.15:0,48,1630	0/0:39,0:39:42.53:0,43,2793	0/0:33,0:33:78.21:0,78,2441	0/1:13,14:27:97.51:784,0,98	1/1:9,17:26:36.12:810,36,0	./.
chr10	4047304	.	GGAA	G	912.80	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.612;DP=696;FS=12.637;HRun=0;HaplotypeScore=108.5601;InbreedingCoeff=0.9804;MQ=58.78;MQ0=10;MQRankSum=-1.053;QD=29.45;ReadPosRankSum=1.961;VQSLOD=3.4372;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:32:70.07:0,70,1784	0/0:5,0:5:15.05:0,15,305	0/0:40,0:17:39.01:0,39,752	0/0:47,0:22:54.70:0,55,908	0/0:25,0:25:69.24:0,69,1474	0/0:22,0:21:63.21:0,63,1323	0/0:28,0:28:75.17:0,75,1495	0/0:23,0:23:66.22:0,66,1364	0/0:29,0:29:78.25:0,78,1623	0/0:29,0:29:84.12:0,84,1604	0/0:21,0:21:54.19:0,54,1191	0/0:24,0:24:72.24:0,72,1496	0/0:21,0:21:63.22:0,63,1387	0/0:20,0:20:60.20:0,60,1258	0/0:27,0:27:49.50:0,49,1337	0/0:36,0:36:96.30:0,96,1959	1/1:2,29:31:62.91:1008,63,0	0/0:29,0:29:66.20:0,66,1364	0/0:18,0:18:51.14:0,51,996	0/0:27,0:27:69.17:0,69,1418	0/0:26,0:26:69.18:0,69,1396	0/0:19,0:19:42.14:0,42,911	0/0:14,0:14:36.11:0,36,751	0/0:25,0:25:72.25:0,72,1586	0/0:17,0:17:51.17:0,51,1065	0/0:22,0:22:63.22:0,63,1364	0/0:30,0:30:84.22:0,84,1742	0/0:8,0:8:21.04:0,21,378
chr10	4047326	.	GGAA	G	474.20	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=2.846;DP=675;FS=3.338;HRun=0;HaplotypeScore=110.7304;InbreedingCoeff=0.6999;MQ=56.96;MQ0=12;MQRankSum=2.259;QD=7.18;ReadPosRankSum=-2.798;VQSLOD=2.5553;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:84.22:0,84,1542	0/0:8,0:8:24.08:0,24,501	0/0:45,0:16:11.18:0,11,218	0/1:42,0:8:4.02:4,0,81	0/0:23,0:23:45.11:0,45,793	0/0:19,0:18:51.16:0,51,984	0/0:38,0:38:96.27:0,96,1817	1/1:7,17:24:45.08:568,45,0	0/0:26,0:26:75.19:0,75,1360	0/0:24,0:24:57.19:0,57,1180	0/0:16,0:16:42.10:0,42,749	0/0:25,0:25:69.20:0,69,1314	0/0:21,0:21:54.09:0,54,998	0/0:20,0:20:54.18:0,54,1119	0/0:19,0:19:48.11:0,48,794	0/0:26,0:26:72.19:0,72,1399	0/0:33,0:33:72.09:0,72,1203	0/0:34,0:34:66.20:0,66,1308	0/0:22,0:22:63.08:0,63,1048	0/0:24,0:24:57.17:0,57,1091	0/0:30,0:30:74.61:0,75,1500	0/0:13,0:13:27.08:0,27,520	0/0:13,0:13:32.83:0,33,630	0/0:25,0:25:63.11:0,63,1042	0/0:15,0:15:45.11:0,45,778	0/0:22,0:22:53.34:0,53,715	0/0:29,0:29:79.04:0,79,979	0/0:8,0:8:23.96:0,24,236
chr10	4047350	.	A	AGAG	1520.91	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=3.512;DP=639;FS=10.311;HRun=0;HaplotypeScore=101.1472;InbreedingCoeff=0.9482;MQ=57.25;MQ0=17;MQRankSum=-0.472;QD=24.14;ReadPosRankSum=2.242;VQSLOD=3.2396;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:60.19:0,60,831	0/0:11,0:11:21.06:0,21,280	0/0:25,0:12:8.87:0,9,125	0/0:27,0:7:11.21:0,11,189	0/0:15,0:15:39.12:0,39,536	0/0:24,0:23:48.11:0,48,643	0/0:38,0:39:90.05:0,90,1141	0/0:28,0:28:32.64:0,33,476	0/0:28,0:28:66.19:0,66,900	0/0:24,0:24:51.17:0,51,722	0/0:15,0:15:36.11:0,36,493	0/0:32,0:32:63.17:0,63,852	0/0:24,0:24:63.19:0,63,860	0/0:24,0:24:57.16:0,57,774	1/1:5,11:17:15.05:282,15,0	0/0:25,0:25:51.11:0,51,651	0/0:28,0:28:48.09:0,48,641	1/1:7,23:28:55.07:1095,55,0	0/0:18,0:14:18.05:0,18,240	0/0:25,0:24:44.96:0,45,611	0/0:30,0:29:69.20:0,69,957	0/0:13,0:12:21.03:0,21,296	0/0:14,0:13:36.12:0,36,511	0/0:19,0:20:42.10:0,42,559	1/1:2,13:16:15.05:282,15,0	0/0:19,0:18:23.02:0,23,244	0/0:23,0:23:44.64:0,45,312	0/0:10,0:10:29.76:0,30,207
chr10	4047352	.	AGG	A	955.91	PASS	AB=0.605;AC=5;AF=0.089;AN=56;BaseQRankSum=8.431;DP=650;FS=9.129;HRun=2;HaplotypeScore=89.8100;InbreedingCoeff=0.7731;MQ=56.83;MQ0=16;MQRankSum=-0.772;QD=18.04;ReadPosRankSum=2.790;VQSLOD=0.8055;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:90.25:0,90,1552	0/0:13,0:13:39.06:0,39,599	0/0:24,0:11:26.79:0,27,365	0/0:27,0:9:20.14:0,20,361	0/0:15,0:15:45.15:0,45,870	0/0:23,0:22:64.43:0,64,1145	0/0:37,0:38:99:0,102,1986	0/0:31,0:30:65.37:0,65,1074	0/0:28,0:28:84.25:0,84,1582	0/0:26,0:26:75.24:0,75,1360	0/0:16,0:16:47.90:0,48,859	0/0:33,0:33:96.31:0,96,1731	0/0:24,0:24:72.25:0,72,1415	0/0:24,0:24:72.23:0,72,1338	0/0:18,0:18:33.10:0,33,488	0/0:26,0:26:78.25:0,78,1407	0/0:29,0:29:67.76:0,68,1202	0/0:30,0:28:64.45:0,64,824	0/0:18,0:14:42.09:0,42,675	0/0:27,0:26:72.16:0,72,1317	0/0:30,0:29:87.23:0,87,1576	0/0:13,0:12:36.12:0,36,615	0/0:13,0:12:36.12:0,36,731	0/0:21,0:21:54.28:0,54,1031	0/0:16,0:16:21.07:0,21,308	1/1:7,12:18:18.49:396,18,0	0/1:8,15:23:31.22:371,0,31	1/1:1,10:11:32.56:318,33,0
chr10	4047355	.	AG	A	555.45	PASS	AB=0.604;AC=4;AF=0.071;AN=56;BaseQRankSum=9.275;DP=649;FS=8.350;HRun=2;HaplotypeScore=79.1489;InbreedingCoeff=0.4716;MQ=61.88;MQ0=15;MQRankSum=-1.382;QD=10.68;ReadPosRankSum=3.621;VQSLOD=1.3901;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:87.22:0,87,1179	0/0:13,0:13:36.12:0,36,530	0/0:27,0:15:38.98:0,39,478	0/0:26,0:11:33.07:0,33,433	0/0:16,0:16:48.15:0,48,692	0/0:20,0:19:53.99:0,54,801	0/0:37,0:37:99:0,102,1511	0/0:29,0:28:66.28:0,66,925	0/0:29,0:29:87.26:0,87,1249	0/0:27,0:27:76.13:0,76,1097	0/0:16,0:16:48.04:0,48,662	0/0:34,0:34:99:0,99,1414	0/0:24,0:24:72.24:0,72,1069	0/0:25,0:25:75.25:0,75,1103	0/0:19,0:19:36.03:0,36,423	0/0:26,0:26:75.24:0,75,1087	0/0:28,0:28:49.52:0,50,915	0/0:32,0:30:71.85:0,72,655	0/0:16,0:12:36.12:0,36,535	0/0:27,0:26:66.22:0,66,989	0/0:30,0:29:87.28:0,87,1261	0/0:13,0:12:36.12:0,36,512	0/0:13,0:12:36.12:0,36,540	0/0:20,0:20:53.80:0,54,801	0/0:17,0:17:20.98:0,21,220	0/1:7,12:18:15.12:218,0,15	0/1:7,15:22:99:220,0,100	1/1:1,10:11:32.70:233,33,0
chr10	4049345	.	CCACCCA	C	340.08	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=2.941;DP=366;FS=11.378;HRun=0;HaplotypeScore=85.3878;InbreedingCoeff=0.6514;MQ=79.49;MQ0=1;MQRankSum=-1.236;QD=14.17;ReadPosRankSum=0.023;VQSLOD=1.3236;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:45.09:0,45,1090	0/0:5,0:4:6.02:0,6,152	0/0:40,0:32:21.58:0,22,653	0/0:35,0:22:23.40:0,23,662	0/0:16,0:16:36.12:0,36,1089	0/0:8,0:8:12.04:0,12,396	0/0:18,0:18:29.74:0,30,991	1/1:10,5:15:15.01:199,15,0	0/0:10,0:10:24.08:0,24,701	0/0:8,0:8:15.05:0,15,428	0/0:1,0:1:3.01:0,3,63	0/0:23,0:23:45.15:0,45,1389	0/0:13,0:13:30.10:0,30,989	0/0:13,0:13:33.11:0,33,960	0/0:12,0:12:21.07:0,21,636	0/0:10,0:10:15.05:0,15,493	1/1:1,8:9:12.04:252,12,0	0/0:10,0:10:12.04:0,12,348	0/0:10,0:10:18.05:0,18,468	0/0:4,0:4:9.03:0,9,297	0/0:34,0:34:60.19:0,60,1772	0/0:5,0:5:6.02:0,6,154	0/0:7,0:7:9.03:0,9,296	0/0:10,0:10:15.03:0,15,312	0/0:10,0:10:15.05:0,15,440	0/0:6,0:6:15:0,15,328	0/0:10,0:10:12.04:0,12,329	0/0:1,0:1:3.01:0,3,80
chr10	4050043	.	G	GACAA	9616.46	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=14.988;DP=665;FS=9.572;HRun=0;HaplotypeScore=126.5582;InbreedingCoeff=0.9714;MQ=65.56;MQ0=0;MQRankSum=-15.648;QD=69.18;ReadPosRankSum=-3.645;VQSLOD=5.6488;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,19:33:81.26:2026,81,0	0/0:7,0:7:19.31:0,19,352	0/0:13,0:13:16.27:0,16,308	0/0:8,0:8:8.50:0,9,93	0/0:20,0:20:57.18:0,57,1061	0/0:32,0:32:96.29:0,96,1753	0/0:20,0:20:60.21:0,60,1162	1/1:14,18:32:96.33:2527,96,0	0/0:26,0:26:75.23:0,75,1386	0/0:24,0:24:69.24:0,69,1337	0/0:24,0:24:72.25:0,72,1385	0/0:25,0:25:63.20:0,63,1188	0/0:38,0:38:99:0,105,1924	0/0:17,0:17:51.16:0,51,955	0/0:33,0:33:99:0,99,1852	0/0:26,0:26:78.24:0,78,1445	1/1:8,16:24:57.14:1394,57,0	0/0:17,0:17:51.17:0,51,972	0/0:21,0:21:60.17:0,60,1081	0/0:37,0:37:99:0,105,2002	0/0:26,0:26:78.27:0,78,1502	0/0:22,0:22:66.19:0,66,1202	0/0:20,0:20:60.17:0,60,1095	0/0:41,0:41:99:0,120,2276	0/0:29,0:29:81.25:0,81,1495	1/1:10,16:26:75.21:1865,75,0	1/1:3,18:21:63.22:1674,63,0	1/1:2,1:3:9:130,9,0
chr10	4050047	.	T	TGA	7126.42	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=15.991;DP=665;FS=7.911;HRun=0;HaplotypeScore=112.2072;InbreedingCoeff=0.8855;MQ=64.38;MQ0=0;MQRankSum=-15.579;QD=45.98;ReadPosRankSum=-2.885;VQSLOD=4.7304;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,21:31:72.22:1351,72,0	0/0:6,0:6:18.06:0,18,276	0/0:13,0:13:18.64:0,19,267	0/1:10,0:11:25.58:26,0,70	0/0:19,0:19:57.19:0,57,873	0/0:31,0:31:93.32:0,93,1424	0/0:21,0:21:57.19:0,57,873	1/1:14,18:32:96.33:1835,96,0	0/0:27,0:27:81.28:0,81,1240	0/0:25,0:25:69.23:0,69,1038	0/0:23,0:23:69.23:0,69,1057	0/0:23,0:23:69.23:0,69,1055	0/0:38,0:38:99:0,111,1687	0/0:17,0:17:48.16:0,48,735	0/0:33,0:33:99:0,99,1510	0/0:26,0:26:78.26:0,78,1195	1/1:10,20:31:74.13:1368,74,0	0/0:17,0:17:51.17:0,51,781	0/0:21,0:21:63.21:0,63,965	0/0:36,0:36:99:0,108,1653	0/0:26,0:26:72.22:0,72,1061	0/0:23,0:23:69.19:0,69,992	0/0:20,0:20:60.19:0,60,897	0/0:39,0:39:99:0,117,1792	0/0:26,0:26:75.25:0,75,1146	1/1:5,17:22:61.88:1199,62,0	1/1:6,18:24:55.58:1175,56,0	1/1:1,3:4:9.03:173,9,0
chr10	4050567	.	CCT	C	2985.55	PASS	AB=0.960;AC=13;AF=0.232;AN=56;BaseQRankSum=9.973;DP=793;FS=15.542;HRun=0;HaplotypeScore=104.6889;InbreedingCoeff=0.7100;MQ=68.32;MQ0=7;MQRankSum=-0.197;QD=16.40;ReadPosRankSum=-0.134;VQSLOD=2.2762;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:52:91.43:0,91,1780	0/0:8,0:8:18.06:0,18,296	0/0:52,1:38:20.42:0,20,815	0/0:62,0:32:42.63:0,43,543	0/0:22,0:22:11.64:0,12,667	0/0:25,0:24:60.21:0,60,987	0/1:31,2:33:5.85:6,0,940	1/1:10,21:31:64.73:767,65,0	0/0:25,0:25:75.25:0,75,1204	0/0:26,0:26:51.17:0,51,836	0/1:14,0:14:8.30:8,0,298	0/0:24,1:25:28.42:0,28,963	0/0:20,1:21:16.66:0,17,772	0/0:34,1:35:46.71:0,47,1236	0/0:25,0:25:54.18:0,54,880	0/0:26,0:26:69.24:0,69,1135	1/1:7,35:42:90.12:1102,90,0	0/0:27,0:27:78.24:0,78,1244	0/0:16,0:16:24.08:0,24,396	0/0:19,1:20:10.63:0,11,690	0/0:58,1:59:99:0,107,2261	0/0:18,0:18:51.17:0,51,841	0/1:14,1:15:4.42:4,0,462	0/0:40,2:43:42.31:0,42,1710	0/0:22,1:23:22.67:0,23,856	1/1:6,17:24:53.99:634,54,0	1/1:1,18:19:45.14:563,45,0	1/1:2,2:4:6.02:75,6,0
chr10	4052543	.	TA	T	562.78	PASS	AB=0.748;AC=8;AF=0.143;AN=56;BaseQRankSum=6.309;DP=522;FS=1.070;HRun=15;HaplotypeScore=65.5214;InbreedingCoeff=0.4232;MQ=73.08;MQ0=0;MQRankSum=-0.826;QD=4.98;ReadPosRankSum=0.261;VQSLOD=1.9512;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:9,13:23:27.60:158,0,28	0/0:6,0:7:14.84:0,15,120	0/0:34,0:14:12.31:0,12,69	0/1:18,1:10:7.67:8,0,21	0/0:24,0:24:44.98:0,45,390	0/0:19,0:20:19.44:0,19,376	0/0:12,0:14:16.30:0,16,229	0/0:17,0:25:39.89:0,40,209	0/0:11,0:11:12:0,12,106	0/0:17,1:18:19.60:0,20,281	0/0:19,3:23:2.69:0,3,300	0/0:16,1:18:15.89:0,16,292	0/0:17,1:18:25.69:0,26,341	0/1:15,4:20:9.98:10,0,279	0/0:16,1:18:16.51:0,17,245	0/0:10,0:11:29.83:0,30,248	0/0:25,4:32:35.97:0,36,527	0/0:11,0:11:29.82:0,30,247	0/0:23,1:25:22.53:0,23,300	0/0:20,2:24:12.12:0,12,325	0/0:5,0:6:8.83:0,9,64	0/0:12,0:14:25.62:0,26,197	0/0:22,0:27:30.14:0,30,327	0/0:7,0:8:17.78:0,18,134	0/0:21,0:21:38.90:0,39,329	1/1:7,12:21:39.42:239,39,0	1/1:5,12:20:10.15:177,10,0	0/1:3,7:10:2.71:110,0,3
chr10	4052787	.	T	TCAGA	16197.32	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-2.095;DP=689;FS=0.309;HRun=0;HaplotypeScore=102.7111;InbreedingCoeff=0.9974;MQ=83.80;MQ0=0;MQRankSum=-6.919;QD=64.02;ReadPosRankSum=0.996;VQSLOD=6.7300;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,35:39:81.28:2150,81,0	0/0:6,0:6:18.06:0,18,336	0/0:25,0:25:35.97:0,36,994	0/0:20,0:19:45.12:0,45,753	0/0:22,0:22:63.16:0,63,1068	0/0:30,0:30:81.24:0,81,1434	0/0:26,0:26:75.20:0,75,1303	1/1:6,23:29:84.27:2052,84,0	0/0:26,0:26:72.25:0,72,1340	0/0:16,0:16:45.15:0,45,798	0/0:19,0:19:57.18:0,57,1032	0/0:22,0:22:63.22:0,63,1158	0/0:27,0:27:78.24:0,78,1384	0/0:24,0:24:66.18:0,66,1117	1/1:2,27:32:66.23:1756,66,0	0/0:26,0:26:69.21:0,69,1225	1/1:5,27:32:81.28:2149,81,0	1/1:2,25:28:63.22:1658,63,0	0/0:24,0:24:69.23:0,69,1234	0/0:12,0:12:33.11:0,33,615	0/0:44,0:44:99:0,126,2279	0/0:17,0:17:45.14:0,45,804	0/0:22,0:22:66.23:0,66,1223	0/0:28,0:28:81.26:0,81,1469	1/1:0,21:23:51.18:1358,51,0	1/1:1,28:29:84.29:2200,84,0	1/1:0,32:33:90.31:2395,90,0	1/1:1,6:7:18.06:479,18,0
chr10	4053331	.	TACAC	T	4376.49	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=10.131;DP=946;FS=0.000;HRun=0;HaplotypeScore=161.3343;InbreedingCoeff=0.9713;MQ=69.46;MQ0=10;MQRankSum=-1.096;QD=30.60;ReadPosRankSum=-0.316;VQSLOD=4.7674;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:61:96.54:0,97,483	0/0:11,0:11:30.09:0,30,683	0/0:41,0:19:14.86:0,15,342	0/0:57,0:45:64.12:0,64,1293	0/0:16,0:16:39.12:0,39,893	0/0:32,0:31:72.19:0,72,1608	0/0:28,0:30:74.97:0,75,1677	1/1:13,24:38:72.06:1038,72,0	0/0:27,0:29:77.72:0,78,1750	0/0:27,0:29:69.02:0,69,1578	0/0:20,0:22:50.86:0,51,1056	0/0:51,0:51:99:0,132,3100	0/0:33,0:34:90.07:0,90,2024	0/0:41,0:43:66.25:0,66,2225	0/0:32,0:31:69.22:0,69,1666	0/0:32,1:37:36.12:0,36,1916	1/1:10,32:44:14.45:1156,14,0	0/0:22,0:23:56.93:0,57,1339	0/0:20,0:20:42.13:0,42,934	0/0:28,0:29:59.90:0,60,1275	0/0:86,0:90:99:0,216,5091	0/0:22,0:22:63.19:0,63,1499	0/0:25,0:25:63.17:0,63,1415	0/0:44,0:45:99:0,108,2657	0/0:22,0:22:51.13:0,51,1159	1/1:6,19:25:57.11:891,57,0	1/1:2,23:26:60.67:986,61,0	1/1:1,7:10:7.06:306,7,0
chr10	4056395	.	TC	T	1059.43	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.982;DP=744;FS=8.893;HRun=6;HaplotypeScore=72.3943;InbreedingCoeff=0.9999;MQ=90.67;MQ0=0;MQRankSum=0.446;QD=22.07;ReadPosRankSum=-4.372;VQSLOD=1.3700;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,126,1609	0/0:17,0:17:45.09:0,45,556	0/0:31,0:30:81.20:0,81,970	0/0:28,0:28:78.03:0,78,943	0/0:32,0:32:87.28:0,87,1139	0/0:17,0:17:42.09:0,42,533	0/0:32,0:32:93.30:0,93,1222	1/1:9,39:48:99:1154,111,0	0/0:25,0:25:72.23:0,72,946	0/0:28,0:28:78.21:0,78,995	0/0:19,0:19:54.18:0,54,708	0/0:37,0:37:99:0,108,1387	0/0:20,0:20:57.17:0,57,733	0/0:23,0:23:66.21:0,66,868	0/0:29,0:29:84.26:0,84,1092	0/0:20,0:20:57.16:0,57,721	0/0:20,0:20:60.20:0,60,789	0/0:17,0:17:48.16:0,48,631	0/0:17,0:17:48.14:0,48,605	0/0:23,0:23:66.18:0,66,823	0/0:26,0:26:69.22:0,69,908	0/0:27,0:27:81.26:0,81,1060	0/0:27,0:26:72.13:0,72,873	0/0:30,0:30:78.23:0,78,997	0/0:28,0:28:78.23:0,78,998	0/0:23,0:23:60.19:0,60,778	0/0:35,0:35:99:0,105,1366	0/0:18,0:18:54.18:0,54,709
chr10	4056992	.	GA	G	1188.78	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.692;DP=739;FS=3.197;HRun=2;HaplotypeScore=71.4702;InbreedingCoeff=0.9955;MQ=84.12;MQ0=0;MQRankSum=-1.043;QD=34.96;ReadPosRankSum=2.780;VQSLOD=4.3355;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,147,2202	0/0:7,0:7:21.07:0,21,315	0/0:23,0:23:66.21:0,66,944	0/0:22,0:22:57.14:0,57,794	0/0:29,0:29:87.29:0,87,1301	0/0:23,0:23:69.22:0,69,1014	0/0:24,0:24:72.24:0,72,1079	0/0:33,0:33:96.32:0,96,1414	0/0:22,0:22:66.22:0,66,988	0/0:31,0:31:93.31:0,93,1392	0/0:23,0:23:69.23:0,69,1033	0/0:25,0:25:75.25:0,75,1107	0/0:30,0:30:87.29:0,87,1285	0/0:23,0:23:69.23:0,69,1029	0/0:42,0:42:99:0,123,1826	0/0:30,0:30:90.28:0,90,1309	1/1:0,34:34:99:1284,99,0	0/0:20,0:20:60.18:0,60,877	0/0:25,0:25:72.24:0,72,1058	0/0:28,0:28:81.27:0,81,1208	0/0:33,0:33:96.33:0,96,1439	0/0:23,0:23:69.23:0,69,1034	0/0:26,0:26:75.25:0,75,1122	0/0:15,0:15:42.14:0,42,630	0/0:24,0:24:72.22:0,72,1049	0/0:29,0:29:87.29:0,87,1284	0/0:35,0:35:99:0,99,1426	0/0:10,0:10:30.10:0,30,442
chr10	4062252	.	AGCACGTGTGTGCCACG	A	184.06	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=2.945;DP=872;FS=0.000;HRun=0;HaplotypeScore=354.8055;InbreedingCoeff=0.5204;MQ=68.93;MQ0=1;MQRankSum=-0.995;QD=2.75;ReadPosRankSum=0.535;VQSLOD=1.4197;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:87.30:0,87,5325	0/0:14,0:14:21.07:0,21,1390	0/0:26,0:21:12.87:0,13,181	0/1:36,0:27:3.43:3,0,306	0/0:31,0:31:69.22:0,69,4228	0/0:22,0:22:54.19:0,54,3069	0/0:34,0:34:60.19:0,60,3465	0/0:37,0:37:51.16:0,51,2108	0/0:35,0:35:66.23:0,66,4552	0/0:36,0:35:72.25:0,72,4344	0/0:12,0:12:27.09:0,27,1797	0/0:39,0:39:96.33:0,96,5972	0/0:28,0:28:54.17:0,54,3267	0/0:48,0:48:99:0,102,6198	0/0:30,0:30:78.27:0,78,5205	0/0:22,0:22:51.18:0,51,3285	1/1:14,17:31:4.23:262,4,0	0/0:51,0:50:99:0,126,7520	0/0:21,0:21:39.09:0,39,1965	0/0:30,0:30:69.24:0,69,4602	0/0:78,0:78:99:0,160,9938	0/0:21,0:21:54.17:0,54,3122	0/0:25,0:25:63.19:0,63,3746	0/0:37,0:37:78.27:0,78,5647	0/0:23,0:23:54.17:0,54,3517	0/0:27,0:27:57.20:0,57,3808	0/0:22,0:22:60.21:0,60,3797	0/0:8,0:8:6.02:0,6,253
chr10	4066413	.	C	CTT	4285.96	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-4.790;DP=625;FS=18.135;HRun=7;HaplotypeScore=79.1240;InbreedingCoeff=0.9987;MQ=64.29;MQ0=1;MQRankSum=-6.455;QD=40.06;ReadPosRankSum=-1.648;VQSLOD=3.1337;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:96.27:0,96,1108	0/0:12,0:12:33.10:0,33,382	0/0:19,0:16:42.93:0,43,462	0/0:10,0:10:21.04:0,21,245	0/0:18,0:18:45.12:0,45,524	0/0:21,0:21:60.15:0,60,678	0/0:20,0:20:60.18:0,60,699	1/1:5,30:36:90.23:1379,90,0	0/0:26,0:26:66.18:0,66,759	0/0:23,0:23:60.16:0,60,692	0/0:25,0:25:69.20:0,69,804	0/0:21,0:21:54.16:0,54,624	0/0:15,0:15:42.12:0,42,489	0/0:21,0:21:57.14:0,57,652	0/0:27,0:27:75.20:0,75,863	0/0:27,0:27:78.23:0,78,909	0/0:36,0:35:99:0,99,1131	0/0:18,0:18:36.05:0,36,405	0/0:19,0:19:41.32:0,41,461	0/0:15,0:15:36.10:0,36,420	0/0:18,0:18:42.11:0,42,489	0/0:21,0:21:57.16:0,57,664	0/0:29,0:29:81.23:0,81,940	0/0:18,0:18:54.16:0,54,629	0/0:25,0:25:75.17:0,75,849	1/1:8,25:33:46.27:1217,46,0	1/1:4,18:22:57.19:920,57,0	1/1:2,14:16:48.16:770,48,0
chr10	4066452	.	ACTTTAAC	A	3565.36	PASS	AB=0.531;AC=5;AF=0.089;AN=56;BaseQRankSum=10.999;DP=628;FS=0.000;HRun=0;HaplotypeScore=140.4432;InbreedingCoeff=0.7625;MQ=55.87;MQ0=6;MQRankSum=-9.306;QD=60.43;ReadPosRankSum=1.677;VQSLOD=3.7896;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,111,4149	0/0:12,0:12:36.12:0,36,1416	0/0:10,0:5:15.05:0,15,518	0/0:8,0:5:12.04:0,12,373	0/0:23,0:23:69.24:0,69,2778	0/0:19,0:19:54.19:0,54,2181	0/0:24,0:24:72.25:0,72,2747	0/0:25,0:22:66.22:0,66,2494	0/0:30,0:30:87.30:0,87,3448	0/0:20,0:20:48.16:0,48,1916	0/0:16,0:16:42.14:0,42,1593	0/0:26,0:26:78.25:0,78,2897	0/0:17,0:17:51.18:0,51,1891	0/0:21,0:21:63.22:0,63,2430	0/0:36,0:35:99:0,105,4019	0/0:26,0:26:75.26:0,75,2893	0/0:39,0:39:99:0,117,4434	0/0:21,0:21:63.22:0,63,2365	0/0:20,0:19:48.16:0,48,1796	0/0:17,0:17:51.18:0,51,1893	0/0:19,0:19:57.20:0,57,2188	0/0:19,0:19:57.20:0,57,2147	0/0:28,0:28:81.28:0,81,3222	0/0:17,0:17:48.16:0,48,1868	0/0:35,0:36:99:0,105,4155	0/1:3,23:26:48.99:1676,0,49	1/1:1,22:23:50.93:1336,51,0	1/1:0,10:10:21.07:554,21,0
chr10	4070382	.	A	ACGTG	4377.10	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-11.077;DP=760;FS=6.684;HRun=0;HaplotypeScore=116.6250;InbreedingCoeff=0.9999;MQ=91.11;MQ0=0;MQRankSum=-1.511;QD=69.48;ReadPosRankSum=2.960;VQSLOD=7.0929;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,120,2166	0/0:12,0:12:36.12:0,36,672	0/0:29,0:29:78.25:0,78,1390	0/0:31,0:31:82.79:0,83,1422	0/0:30,0:30:84.29:0,84,1568	0/0:24,0:24:69.24:0,69,1288	0/0:27,0:27:81.28:0,81,1504	0/0:37,0:37:99:0,111,2029	0/0:22,0:22:60.21:0,60,1120	0/0:36,0:36:99:0,105,1902	0/0:19,0:19:57.20:0,57,1064	0/0:28,0:28:78.26:0,78,1419	0/0:29,0:29:81.26:0,81,1481	0/0:22,0:22:54.18:0,54,991	0/0:35,0:35:99:0,105,1955	0/0:33,0:33:90.31:0,90,1680	0/0:39,0:39:99:0,99,1779	0/0:21,0:21:54.17:0,54,976	0/0:18,0:18:51.17:0,51,952	0/0:20,0:20:57.20:0,57,1057	0/0:27,0:27:81.28:0,81,1499	0/0:28,0:28:84.26:0,84,1507	0/0:25,0:25:63.22:0,63,1151	0/0:34,0:34:90.29:0,90,1648	0/0:27,0:27:76.50:0,77,1392	1/1:3,23:27:72.18:1746,72,0	1/1:1,21:23:63.14:1671,63,0	1/1:1,12:13:36.12:959,36,0
chr10	4070716	.	AT	A	854.16	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.390;DP=437;FS=2.361;HRun=7;HaplotypeScore=55.4306;InbreedingCoeff=0.7886;MQ=73.44;MQ0=0;MQRankSum=1.274;QD=22.48;ReadPosRankSum=-4.358;VQSLOD=1.7838;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:75.21:0,75,916	0/0:10,0:10:27.09:0,27,340	0/0:12,0:12:9.58:0,10,112	0/0:4,0:4:11.65:0,12,71	0/0:18,0:18:48.14:0,48,591	0/0:25,0:25:75.21:0,75,907	0/0:13,0:13:30.10:0,30,378	1/1:5,33:38:93.21:949,93,0	0/0:8,0:8:21.07:0,21,264	0/0:24,0:23:63.20:0,63,783	0/0:14,0:14:39.11:0,39,468	0/0:8,0:8:24.08:0,24,302	0/0:9,0:9:18.03:0,18,210	0/0:4,0:4:12.04:0,12,151	0/0:6,0:6:18.04:0,18,213	0/0:10,0:10:24.08:0,24,302	0/0:30,0:30:75.24:0,75,942	0/0:21,0:21:45.14:0,45,563	0/0:25,0:25:72.23:0,72,906	0/0:13,0:13:39.12:0,39,491	0/0:10,0:10:27.09:0,27,340	0/0:7,0:7:15.04:0,15,177	0/0:9,0:9:27.09:0,27,340	0/0:2,0:2:6.02:0,6,75	0/0:21,0:20:57.18:0,57,717	0/0:23,0:23:60.96:0,61,360	0/0:27,0:26:76.11:0,76,461	0/0:19,0:19:49.80:0,50,303
chr10	4071639	.	G	GAT	785.12	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-6.831;DP=646;FS=5.082;HRun=0;HaplotypeScore=73.9804;InbreedingCoeff=0.9987;MQ=81.54;MQ0=0;MQRankSum=-2.363;QD=37.39;ReadPosRankSum=0.079;VQSLOD=5.7086;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:78.25:0,78,1095	0/0:15,0:15:42.14:0,42,602	0/0:18,0:18:48.16:0,48,665	0/0:19,0:19:43.91:0,44,571	0/0:32,0:32:90.29:0,90,1269	0/0:18,0:18:54.17:0,54,756	0/0:14,0:14:42.13:0,42,582	0/0:36,0:36:99:0,102,1458	0/0:20,0:20:45.15:0,45,641	0/0:29,0:29:78.26:0,78,1114	0/0:28,0:28:84.28:0,84,1202	0/0:26,0:26:75.25:0,75,1074	0/0:19,0:19:54.17:0,54,758	0/0:24,0:24:66.21:0,66,920	0/0:23,0:23:63.21:0,63,899	0/0:9,0:9:27.08:0,27,369	1/1:2,19:21:48.16:880,48,0	0/0:21,0:21:57.19:0,57,816	0/0:21,0:21:57.18:0,57,797	0/0:31,0:31:87.29:0,87,1247	0/0:15,0:15:45.15:0,45,645	0/0:34,0:34:93.31:0,93,1324	0/0:20,0:20:60.20:0,60,858	0/0:14,0:14:36.12:0,36,515	0/0:30,0:30:90.30:0,90,1288	0/0:30,0:30:90.30:0,90,1285	0/0:31,0:31:93.31:0,93,1327	0/0:20,0:20:60.20:0,60,860
chr10	4072332	.	CCAT	C	1455.01	PASS	AB=0.660;AC=4;AF=0.071;AN=56;BaseQRankSum=9.853;DP=584;FS=3.167;HRun=0;HaplotypeScore=94.9230;InbreedingCoeff=-0.0521;MQ=70.89;MQ0=0;MQRankSum=-7.855;QD=25.98;ReadPosRankSum=0.266;VQSLOD=3.5634;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,114,2606	0/0:13,0:13:39.13:0,39,888	0/1:9,1:8:6.08:6,0,297	0/0:14,0:15:13.85:0,14,466	0/0:21,0:21:63.22:0,63,1453	0/0:18,0:18:54.19:0,54,1207	0/0:24,0:24:72.25:0,72,1661	0/0:12,0:12:36.12:0,36,783	0/0:21,0:21:63.20:0,63,1369	0/0:23,0:23:69.23:0,69,1500	0/0:14,0:14:42.14:0,42,969	0/0:22,0:22:63.22:0,63,1415	0/0:14,0:14:36.12:0,36,748	0/0:24,0:24:72.25:0,72,1639	0/0:19,0:19:57.16:0,57,1156	0/0:19,0:19:57.20:0,57,1313	0/0:29,0:29:87.24:0,87,1823	0/0:29,0:29:78.27:0,78,1742	0/0:19,0:18:54.17:0,54,1201	0/0:13,0:13:39.13:0,39,880	0/0:48,0:45:99:0,120,2646	0/0:19,0:19:54.19:0,54,1245	0/0:23,0:22:66.23:0,66,1499	0/0:17,0:17:51.17:0,51,1132	0/0:31,0:31:90.30:0,90,1965	0/1:6,16:21:99:713,0,133	0/1:1,11:12:13.75:519,0,14	0/1:5,7:12:99:322,0,241
chr10	4073990	.	AAG	A	339.46	PASS	AB=0.988;AC=11;AF=0.196;AN=56;BaseQRankSum=8.273;DP=550;FS=27.278;HRun=0;HaplotypeScore=83.6341;InbreedingCoeff=0.0037;MQ=61.46;MQ0=14;MQRankSum=-1.851;QD=1.35;ReadPosRankSum=0.396;VQSLOD=-0.0897;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:29:48.03:58,0,48	0/0:5,0:5:1.74:0,2,90	0/1:38,0:13:20.21:20,0,108	0/1:21,0:9:0.72:1,0,21	0/0:25,0:25:54.83:0,55,501	0/0:18,0:18:35.06:0,35,459	0/0:17,0:17:41.89:0,42,491	0/1:25,0:24:25.05:108,0,25	0/0:12,0:11:24.22:0,24,251	0/0:23,0:23:47.75:0,48,629	0/0:19,0:19:24:0,24,382	0/0:11,0:11:20.11:0,20,222	0/0:14,0:14:9.27:0,9,200	0/0:13,0:13:18.28:0,18,232	0/1:13,0:13:10.18:10,0,33	0/0:13,0:13:34.78:0,35,398	1/1:34,1:35:22.79:170,23,0	0/1:40,2:42:25.96:26,0,268	0/0:26,0:26:4.80:0,5,446	0/0:14,0:14:12.96:0,13,364	0/0:7,0:7:18.30:0,18,191	0/0:13,0:13:30.85:0,31,295	0/0:25,0:25:48.42:0,48,480	0/0:14,0:13:24.32:0,24,338	0/0:30,0:30:11.46:0,11,293	0/1:16,0:16:10.92:71,0,11	0/1:17,0:17:15.71:16,0,23	0/1:14,1:14:0.12:0,0,56
chr10	4073992	.	GAAA	G	1186.25	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=1.217;DP=546;FS=3.009;HRun=13;HaplotypeScore=90.3999;InbreedingCoeff=0.9421;MQ=62.71;MQ0=13;MQRankSum=-0.745;QD=16.03;ReadPosRankSum=-0.192;VQSLOD=2.5818;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:29:25.89:0,26,89	0/0:5,0:5:9.03:0,9,151	0/0:39,0:14:27.20:0,27,280	0/0:21,0:10:8.16:0,8,77	0/0:25,0:25:50.89:0,51,827	0/0:16,0:16:36.04:0,36,485	0/0:16,0:16:39.05:0,39,622	1/1:3,21:24:49.33:549,49,0	0/0:10,0:10:30.07:0,30,455	0/0:23,0:24:63.15:0,63,1005	0/0:17,0:17:41.12:0,41,671	0/0:11,0:11:27.06:0,27,418	0/0:14,0:14:12.20:0,12,420	0/0:13,0:13:24.05:0,24,382	0/0:4,0:12:17.56:0,18,125	0/0:13,0:13:30.10:0,30,563	0/0:4,0:35:28.59:0,29,90	0/0:19,0:40:54.31:0,54,637	0/0:27,0:27:68.71:0,69,932	0/0:13,0:14:36.09:0,36,577	0/0:8,0:8:24.05:0,24,380	0/0:12,0:13:35.95:0,36,503	0/0:25,0:25:66.14:0,66,1070	0/0:12,0:13:24.55:0,25,447	0/0:10,0:30:53.83:0,54,498	1/1:4,12:16:35.96:408,36,0	1/1:2,16:18:21.02:240,21,0	1/1:5,10:14:11.94:146,12,0
chr10	4076438	.	CAT	C	1510.36	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.503;DP=614;FS=16.530;HRun=0;HaplotypeScore=71.7543;InbreedingCoeff=0.9956;MQ=80.38;MQ0=1;MQRankSum=-2.471;QD=39.75;ReadPosRankSum=0.523;VQSLOD=4.1159;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,38:37:99:1605,99,0	0/0:8,0:8:24.05:0,24,430	0/0:23,0:22:59.37:0,59,1143	0/0:19,0:19:44.30:0,44,952	0/0:15,0:15:42.09:0,42,740	0/0:21,0:21:57.18:0,57,1112	0/0:28,0:28:84.25:0,84,1615	0/0:27,0:27:81.17:0,81,1386	0/0:22,0:22:66.20:0,66,1300	0/0:20,0:20:57.18:0,57,1081	0/0:8,0:8:24.05:0,24,414	0/0:31,0:31:93.29:0,93,1798	0/0:25,0:25:75.26:0,75,1495	0/0:27,0:27:78.22:0,78,1540	0/0:21,0:21:63.19:0,63,1206	0/0:24,0:24:72.20:0,72,1351	0/0:28,0:28:84.22:0,84,1572	0/0:16,0:16:48.13:0,48,901	0/0:18,0:18:48.13:0,48,870	0/0:14,0:14:42.14:0,42,852	0/0:51,0:51:99:0,150,2854	0/0:12,0:12:36.11:0,36,694	0/0:12,0:12:36.12:0,36,730	0/0:29,0:29:87.26:0,87,1687	0/0:20,0:20:60.17:0,60,1144	0/0:25,0:25:72.23:0,72,1381	0/0:18,0:18:54.17:0,54,1030	0/0:14,0:14:42.12:0,42,813
chr10	4077131	.	GACACAGACAC	G	956.68	PASS	AB=0.923;AC=3;AF=0.056;AN=54;BaseQRankSum=5.161;DP=844;FS=13.731;HRun=0;HaplotypeScore=237.5538;InbreedingCoeff=0.4811;MQ=66.79;MQ0=6;MQRankSum=-0.850;QD=18.76;ReadPosRankSum=1.455;VQSLOD=1.4607;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:60.08:0,60,867	0/0:8,0:8:12.04:0,12,421	0/0:32,0:21:2.99:0,3,24	0/0:34,0:22:18.06:0,18,342	0/0:28,0:28:57.20:0,57,1691	0/0:22,0:22:33.11:0,33,1106	0/0:38,0:38:75.24:0,75,2460	0/0:41,0:41:63.20:0,63,1151	0/0:23,0:23:39.13:0,39,1300	0/0:35,0:33:51.17:0,51,1689	0/0:17,0:16:24.08:0,24,772	0/0:20,0:20:36.12:0,36,1275	0/0:31,0:31:54.18:0,54,1727	0/0:27,0:27:48.16:0,48,1857	./.	0/0:40,0:40:75.24:0,75,2622	0/0:37,0:37:63.19:0,63,2068	0/1:22,2:23:99:457,0,105	0/0:25,0:25:36.11:0,36,1249	0/0:25,0:25:55.07:0,55,1770	0/0:47,0:46:81.26:0,81,2504	0/0:34,0:34:66.23:0,66,2057	0/0:25,0:25:51.16:0,51,1624	0/0:37,0:37:69.22:0,69,2341	1/1:25,2:25:33.05:605,33,0	0/0:28,0:28:42.13:0,42,1031	0/0:30,0:30:30.36:0,30,646	0/0:22,0:22:0.90:0,1,241
chr10	4077179	.	GACAGACAGAC	G	2501.38	PASS	AB=0.990;AC=8;AF=0.143;AN=56;BaseQRankSum=7.636;DP=722;FS=28.636;HRun=0;HaplotypeScore=209.7370;InbreedingCoeff=0.4122;MQ=53.05;MQ0=10;MQRankSum=-5.446;QD=17.62;ReadPosRankSum=-3.519;VQSLOD=1.1066;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:29:99:227,0,237	0/0:6,0:6:15.05:0,15,386	0/0:12,0:8:24.08:0,24,584	0/0:30,0:9:14.80:0,15,315	0/0:22,0:22:57.17:0,57,1530	0/0:23,0:22:54.17:0,54,1689	0/0:38,0:38:99:0,105,2610	1/1:5,21:24:52.53:923,53,0	0/0:23,0:23:60.19:0,60,1416	0/0:26,0:23:69.18:0,69,1774	0/0:21,0:19:38.61:0,39,951	0/0:16,0:16:42.13:0,42,1170	0/0:26,0:26:44.36:0,44,1862	0/0:21,0:21:60.18:0,60,1810	0/0:40,0:40:15.25:0,15,263	0/0:37,0:37:99:0,105,2428	0/0:28,0:28:62:0,62,1444	0/0:27,0:26:17.50:0,18,574	0/0:28,0:27:75.14:0,75,1845	0/0:32,0:32:57.29:0,57,1853	0/0:32,0:30:87.28:0,87,2154	0/0:27,0:27:56:0,56,1408	0/0:25,0:24:54.99:0,55,1537	0/0:40,0:40:95.74:0,96,2346	0/1:27,0:25:11.53:12,0,79	0/1:20,0:16:99:287,0,325	0/1:24,0:25:99:470,0,223	1/1:15,0:14:26.02:730,26,0
chr10	4077187	.	GAC	G	1300.26	PASS	AB=0.987;AC=12;AF=0.214;AN=56;BaseQRankSum=13.237;DP=708;FS=13.328;HRun=0;HaplotypeScore=123.2161;InbreedingCoeff=0.3557;MQ=52.43;MQ0=9;MQRankSum=-3.712;QD=6.05;ReadPosRankSum=-1.673;VQSLOD=2.2971;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:33,0:33:39.27:438,39,0	0/0:6,0:6:14.88:0,15,113	0/0:12,0:8:23.76:0,24,184	0/0:27,0:9:12.06:0,12,90	0/0:21,0:21:56.83:0,57,594	0/0:19,0:18:48.05:0,48,690	0/0:42,0:41:78.62:0,79,1022	1/1:25,0:23:40.10:238,40,0	0/0:22,0:22:25.74:0,26,553	0/0:29,0:27:65.62:0,66,626	0/1:21,0:19:41.64:42,0,265	0/0:16,0:16:27.43:0,27,369	0/1:21,2:23:25.65:26,0,564	0/0:22,0:22:31.11:0,31,524	0/0:37,0:36:11.81:0,12,125	0/0:35,0:35:18.11:0,18,723	0/0:26,0:26:50.02:0,50,321	0/1:28,0:27:10.17:10,0,242	0/0:26,0:26:65.37:0,65,673	0/0:29,2:31:13.35:0,13,641	0/0:31,0:30:35.45:0,35,766	0/0:22,0:22:52.31:0,52,510	0/0:26,1:26:56.47:0,56,592	0/0:40,0:40:83.75:0,84,1007	0/1:24,0:24:41.11:52,0,41	0/1:23,0:19:24.33:196,0,24	0/1:24,0:24:25.87:222,0,26	1/1:14,0:13:33.97:246,34,0
chr10	4077189	.	CAG	C	438.52	PASS	AB=0.932;AC=15;AF=0.288;AN=52;BaseQRankSum=5.152;DP=724;FS=9.200;HRun=0;HaplotypeScore=128.4306;InbreedingCoeff=-0.1812;MQ=52.29;MQ0=8;MQRankSum=0.493;QD=1.12;ReadPosRankSum=3.606;VQSLOD=1.9264;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:36,0:36:8.78:9,0,105	./.	./.	0/1:29,0:8:0:0,0,0	0/0:23,0:23:29.91:0,30,380	0/0:18,1:18:30.09:0,30,428	0/0:40,0:39:29.91:0,30,417	0/0:25,0:23:13.30:0,13,77	0/1:18,4:22:68.76:69,0,240	0/0:30,0:28:26.99:0,27,329	0/1:19,1:18:35.38:35,0,117	0/1:14,2:16:17.89:18,0,158	0/1:25,0:25:37.79:38,0,214	0/1:20,4:24:11.86:12,0,204	0/1:32,1:35:17.75:18,0,36	0/1:29,6:35:99:153,0,326	1/1:16,0:26:14.20:70,14,0	0/1:27,1:27:49.88:66,0,50	0/1:25,1:26:5.88:6,0,303	0/1:33,1:34:38.34:38,0,392	0/1:32,3:34:55.98:56,0,392	0/0:22,0:22:14.08:0,14,183	0/0:27,0:26:21.07:0,21,303	0/0:36,4:40:9.21:0,9,534	0/0:8,0:24:2.84:0,3,14	0/0:23,0:20:14.40:0,14,118	0/0:26,0:26:10.49:0,10,209	0/0:14,0:13:4.48:0,4,21
chr10	4078647	.	GAAGTCA	G	2886.65	PASS	AB=0.541;AC=5;AF=0.089;AN=56;BaseQRankSum=10.186;DP=703;FS=19.477;HRun=0;HaplotypeScore=143.5070;InbreedingCoeff=0.7760;MQ=81.81;MQ0=0;MQRankSum=-10.105;QD=57.73;ReadPosRankSum=1.023;VQSLOD=2.7963;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,114,4028	0/0:9,0:9:27.09:0,27,927	0/0:15,0:15:42.14:0,42,1451	0/0:23,0:23:51.14:0,51,1505	0/0:26,0:26:72.25:0,72,2458	0/0:20,0:20:54.19:0,54,1870	0/0:19,0:19:57.18:0,57,1924	0/0:24,0:24:66.23:0,66,2290	0/0:25,0:25:72.25:0,72,2535	0/0:27,0:27:74.91:0,75,2613	0/0:12,0:12:36.12:0,36,1271	0/0:34,0:34:96.33:0,96,3357	0/0:28,0:28:75.26:0,75,2610	0/0:37,0:37:99:0,108,3715	0/0:41,0:41:99:0,123,4194	0/0:23,0:23:66.21:0,66,2242	0/0:37,0:37:99:0,102,3519	0/0:28,0:28:81.28:0,81,2737	0/0:24,0:24:69.24:0,69,2263	0/0:19,0:19:51.15:0,51,1708	0/0:58,0:58:99:0,172,5902	0/0:22,0:22:60.21:0,60,2101	0/0:18,0:18:54.19:0,54,1844	0/0:22,0:22:63.19:0,63,2133	0/0:23,0:23:66.23:0,66,2275	0/1:3,17:20:54.89:1062,0,55	1/1:1,23:24:66.23:1534,66,0	1/1:0,6:6:18.06:420,18,0
chr10	4078830	.	AGCACTGTGG	A	1042.95	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=6.784;DP=555;FS=8.317;HRun=0;HaplotypeScore=149.7277;InbreedingCoeff=0.7370;MQ=74.58;MQ0=0;MQRankSum=-7.020;QD=7.96;ReadPosRankSum=-1.107;VQSLOD=1.8257;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:17,11:28:26.96:502,27,0	0/0:9,0:9:9.03:0,9,393	0/0:22,0:21:0.89:0,1,2	0/1:16,0:15:0:0,0,0	0/0:3,0:3:9.03:0,9,391	0/0:17,0:17:30.10:0,30,1284	0/0:26,0:26:39.13:0,39,1569	1/1:22,0:22:0.47:1,0,0	0/0:27,0:27:42.14:0,42,1726	0/0:13,0:13:18.06:0,18,787	0/0:6,0:6:3.01:0,3,102	0/0:23,0:23:33.10:0,33,1236	0/0:27,0:27:33.11:0,33,1285	0/0:26,0:26:39.13:0,39,1690	0/0:17,0:17:18.06:0,18,768	0/0:21,0:21:36.12:0,36,1449	1/1:12,0:22:9.03:189,9,0	0/0:26,0:26:48.16:0,48,1801	0/0:18,0:18:9.03:0,9,351	0/0:7,0:7:6.02:0,6,269	0/0:51,0:51:78.27:0,78,3195	0/0:15,0:15:18.06:0,18,744	0/0:12,0:12:15.05:0,15,612	0/0:41,0:41:60.21:0,60,2594	0/0:17,0:17:42.14:0,42,1798	1/1:13,4:17:12.04:283,12,0	1/1:10,7:17:3.01:57,3,0	1/1:4,5:9:6.02:162,6,0
chr10	4080168	.	TA	T	374.35	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.808;DP=521;FS=0.000;HRun=11;HaplotypeScore=65.3296;InbreedingCoeff=0.6021;MQ=54.35;MQ0=25;MQRankSum=0.475;QD=17.02;ReadPosRankSum=-1.121;VQSLOD=4.0329;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:13:2.68:0,3,11	0/0:11,0:11:21.05:0,21,224	0/0:11,0:6:14.97:0,15,134	0/0:13,0:12:33.06:0,33,344	1/1:2,19:21:58.93:469,59,0	0/0:17,0:17:45.11:0,45,480	0/0:16,1:17:20.46:0,20,415	0/0:14,0:26:61.43:0,61,354	0/0:17,0:17:45.10:0,45,472	0/0:27,1:28:47.46:0,47,691	0/0:23,1:22:20.44:0,20,411	0/0:26,1:28:49.06:0,49,695	0/0:12,2:14:2.43:0,2,231	0/0:17,0:15:39.10:0,39,416	0/0:26,0:26:66.17:0,66,704	0/0:25,2:27:13.74:0,14,516	0/0:14,0:11:2.80:0,3,7	0/0:21,0:18:54.09:0,54,563	0/0:17,0:14:26.22:0,26,309	0/0:22,0:23:39.86:0,40,570	0/0:10,1:11:8.40:0,8,276	0/0:13,1:14:8.43:0,8,289	0/0:13,0:13:36.54:0,37,374	0/0:13,0:13:28.01:0,28,289	0/0:18,1:19:26.50:0,26,487	0/0:20,0:17:34.71:0,35,217	0/0:19,0:17:27.71:0,28,166	0/0:14,0:13:20.91:0,21,128
chr10	4080468	.	CAGAGAGAGAGAG	C	770.24	PASS	AB=0.857;AC=7;AF=0.152;AN=46;BaseQRankSum=5.750;DP=559;FS=29.461;HRun=0;HaplotypeScore=157.0374;InbreedingCoeff=0.5953;MQ=41.23;MQ0=41;MQRankSum=-4.324;QD=12.23;ReadPosRankSum=-0.156;VQSLOD=1.2004;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:8,0:6:18.06:0,18,700	./.	./.	0/0:23,0:22:30.07:0,30,1221	0/0:17,0:17:20.90:0,21,857	0/0:25,0:23:15.05:0,15,679	0/0:18,0:13:15.86:0,16,267	0/0:15,0:13:9.03:0,9,279	0/0:20,0:20:30.10:0,30,1218	0/0:8,0:8:6.02:0,6,120	0/0:19,0:18:23.64:0,24,969	0/0:19,0:17:21.02:0,21,818	0/0:30,0:28:33.09:0,33,1310	0/0:15,8:23:0.43:0,0,1	0/0:21,0:20:12.69:0,13,465	1/1:14,0:16:1.75:82,2,0	1/1:13,4:17:12.35:386,12,0	0/0:10,0:10:16.87:0,17,510	0/0:14,0:14:12.04:0,12,606	0/0:20,0:19:21.06:0,21,873	0/0:24,0:23:21.03:0,21,761	0/0:11,0:11:4.79:0,5,160	0/0:31,0:26:18.92:0,19,776	./.	1/1:13,0:14:9.36:222,9,0	0/1:10,0:10:32.98:204,0,33	./.
chr10	4081692	.	A	AG	7784.16	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-13.455;DP=546;FS=1.084;HRun=2;HaplotypeScore=47.8078;InbreedingCoeff=0.9994;MQ=58.07;MQ0=1;MQRankSum=-0.355;QD=39.12;ReadPosRankSum=0.214;VQSLOD=4.9925;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,40:40:99:1597,111,0	0/0:14,0:14:42.13:0,42,520	0/0:19,0:11:33.10:0,33,396	0/0:15,0:11:33.07:0,33,388	0/0:20,0:20:57.18:0,57,707	0/0:20,0:20:57.18:0,57,707	0/0:13,0:13:36.10:0,36,433	1/1:1,15:16:45.15:647,45,0	0/0:21,0:21:63.20:0,63,781	0/0:26,0:26:75.24:0,75,928	0/0:15,0:15:42.12:0,42,508	0/0:19,0:19:54.17:0,54,669	0/0:17,0:17:48.15:0,48,595	0/0:15,0:15:45.14:0,45,558	1/1:0,15:15:45.15:648,45,0	0/0:18,0:18:51.16:0,51,632	1/1:0,26:26:75.25:1080,75,0	1/1:0,19:19:54.18:770,54,0	0/0:17,0:16:45.14:0,45,557	0/0:20,0:20:57.18:0,57,706	0/0:29,0:29:84.25:0,84,1027	0/0:18,0:18:54.17:0,54,669	0/0:20,0:20:54.16:0,54,657	0/0:11,0:11:33.10:0,33,409	1/1:1,18:19:54.18:778,54,0	1/1:3,24:26:28.98:848,29,0	1/1:1,25:27:75.25:1071,75,0	1/1:0,9:9:24.08:346,24,0
chr10	4083472	.	T	TA	326.21	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.073;DP=799;FS=2.391;HRun=2;HaplotypeScore=77.7124;InbreedingCoeff=0.9993;MQ=72.80;MQ0=0;MQRankSum=-0.911;QD=14.18;ReadPosRankSum=-4.842;VQSLOD=1.4600;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:60,0:60:99:0,165,2016	0/0:16,0:16:48.15:0,48,595	0/0:21,0:20:54.15:0,54,640	0/0:26,0:27:72:0,72,914	0/0:20,0:20:54.16:0,54,657	0/0:20,0:20:53.84:0,54,669	0/0:43,0:43:99:0,123,1511	1/1:17,6:23:36.07:421,36,0	0/0:37,0:37:99:0,111,1348	0/0:22,0:22:66.21:0,66,818	0/0:25,0:25:66.21:0,66,818	0/0:27,0:27:81.20:0,81,974	0/0:28,0:28:84.25:0,84,1029	0/0:29,0:29:84.26:0,84,1041	0/0:42,0:42:99:0,123,1525	0/0:29,0:29:84.25:0,84,1029	0/0:33,0:33:93.29:0,93,1153	0/0:28,0:28:81.24:0,81,991	0/0:19,0:19:54.14:0,54,638	0/0:17,0:17:48.13:0,48,581	0/0:51,0:51:99:0,144,1719	0/0:27,0:27:75.24:0,75,929	0/0:23,0:23:66.15:0,66,788	0/0:31,0:31:93.29:0,93,1153	0/0:21,0:21:57.17:0,57,694	0/0:35,0:35:96.30:0,96,1190	0/0:35,0:35:99:0,102,1252	0/0:10,0:10:30.09:0,30,372
chr10	4084869	.	TTCTC	T	673.39	PASS	AB=0.900;AC=14;AF=0.269;AN=52;BaseQRankSum=3.086;DP=585;FS=6.941;HRun=0;HaplotypeScore=121.1598;InbreedingCoeff=0.4095;MQ=61.30;MQ0=25;MQRankSum=-2.603;QD=4.21;ReadPosRankSum=-0.685;VQSLOD=1.6379;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:17:0.45:0,0,1	1/1:3,0:3:3.01:40,3,0	./.	0/0:47,0:20:0:0,0,0	0/0:15,0:15:6.02:0,6,140	0/0:17,0:17:17.94:0,18,216	0/0:18,0:17:4.55:0,5,29	0/0:28,0:28:3.39:0,3,18	1/1:19,1:19:9.09:98,9,0	0/0:27,0:26:43.44:0,43,572	0/0:13,0:13:11.99:0,12,231	0/1:23,0:23:23.38:23,0,445	0/0:18,0:18:9.24:0,9,154	0/0:18,0:18:8.98:0,9,161	0/1:23,0:25:30.48:30,0,37	0/0:16,0:16:17.78:0,18,284	0/1:13,1:12:13.59:38,0,14	./.	0/0:17,0:16:2.60:0,3,7	0/0:19,0:20:9.02:0,9,150	0/0:44,0:43:18.04:0,18,262	0/0:20,0:20:17.74:0,18,161	0/0:16,0:16:6.02:0,6,97	0/0:22,0:22:8.90:0,9,155	0/1:12,0:15:7.16:7,0,19	1/1:16,1:18:17.63:196,18,0	1/1:14,4:20:24:265,24,0	1/1:15,1:19:12.02:133,12,0
chr10	4084926	.	TCACACA	T	866.70	PASS	AB=0.813;AC=8;AF=0.154;AN=52;BaseQRankSum=3.416;DP=573;FS=2.008;HRun=0;HaplotypeScore=148.6025;InbreedingCoeff=0.6708;MQ=44.86;MQ0=33;MQRankSum=-5.627;QD=8.33;ReadPosRankSum=-0.100;VQSLOD=2.6959;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:10,13:24:0.58:221,0,1	0/0:10,0:10:18.06:0,18,561	./.	./.	0/0:8,0:20:20.45:0,20,502	0/0:22,1:22:32.89:0,33,841	0/0:20,0:19:36.07:0,36,917	0/0:10,0:8:7.58:0,8,116	0/0:16,0:16:18.06:0,18,514	0/0:20,0:21:33.40:0,33,649	0/0:14,0:16:23.12:0,23,708	0/0:18,0:17:27.04:0,27,628	0/0:21,0:20:35.79:0,36,1155	0/0:28,0:28:46.83:0,47,1373	0/0:26,0:25:53.55:0,54,1389	0/0:18,0:19:33.11:0,33,984	0/0:22,0:19:36.03:0,36,941	0/0:10,0:9:18.06:0,18,493	0/0:12,0:10:15.77:0,16,294	0/0:13,0:12:14.68:0,15,484	1/1:17,0:24:1.09:2,1,0	0/0:12,0:13:13.79:0,14,476	0/0:10,0:9:5.94:0,6,164	0/0:31,0:31:41.10:0,41,1157	0/0:30,0:30:48.10:0,48,1274	1/1:8,10:19:16.06:462,16,0	1/1:13,9:22:15.51:303,16,0	0/1:12,0:12:5.31:5,0,57
chr10	4085849	.	GA	G	5012.04	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=13.985;DP=772;FS=17.143;HRun=6;HaplotypeScore=75.5517;InbreedingCoeff=0.9994;MQ=85.33;MQ0=0;MQRankSum=-2.013;QD=28.16;ReadPosRankSum=1.291;VQSLOD=3.5022;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,48:51:99:1386,129,0	0/0:14,0:14:39.13:0,39,513	0/0:34,0:34:57.47:0,57,932	0/0:19,0:19:45.08:0,45,539	0/0:38,0:38:99:0,111,1432	0/0:28,0:28:81.26:0,81,1064	0/0:23,0:23:63.20:0,63,828	1/1:7,27:34:81.18:862,81,0	0/0:32,0:32:90.29:0,90,1183	0/0:27,0:27:75.24:0,75,979	0/0:26,0:26:72.22:0,72,930	0/0:33,0:33:96.31:0,96,1262	0/0:32,0:32:93.30:0,93,1223	0/0:20,0:20:57.19:0,57,749	0/0:30,0:30:87.25:0,87,1126	0/0:25,0:24:75.23:0,75,972	1/1:1,21:22:57.14:613,57,0	0/0:18,1:19:22.32:0,22,622	0/0:28,0:28:78.25:0,78,1023	0/0:26,0:26:75.24:0,75,986	0/0:28,0:28:72.23:0,72,947	0/0:23,0:23:66.21:0,66,869	0/0:35,0:35:99:0,102,1340	0/0:29,0:29:84.27:0,84,1103	0/0:25,0:25:72.23:0,72,935	1/1:1,31:32:56.76:959,57,0	1/1:0,24:24:72.18:774,72,0	1/1:0,15:15:39.10:418,39,0
chr10	4085925	.	GTGT	G	3011.29	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=10.788;DP=727;FS=1.586;HRun=0;HaplotypeScore=102.2709;InbreedingCoeff=0.9921;MQ=90.72;MQ0=0;MQRankSum=-4.230;QD=46.33;ReadPosRankSum=0.512;VQSLOD=5.6156;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,111,2608	0/0:12,0:12:36.12:0,36,848	0/0:30,0:30:84.26:0,84,1907	0/0:28,0:28:66.18:0,66,1607	0/0:28,0:28:84.27:0,84,1939	0/0:30,0:30:87.28:0,87,2003	0/0:24,0:24:72.25:0,72,1656	0/0:36,0:36:99:0,102,2366	0/0:27,0:27:81.28:0,81,1913	0/0:36,0:36:99:0,108,2515	0/0:16,0:16:48.16:0,48,1125	0/0:31,0:31:93.32:0,93,2185	0/0:29,0:29:81.28:0,81,1883	0/0:23,0:23:69.22:0,69,1578	0/0:28,0:28:84.29:0,84,1960	0/0:23,0:23:66.23:0,66,1559	0/0:24,0:24:69.24:0,69,1632	0/0:29,0:29:87.30:0,87,2055	0/0:17,0:17:51.17:0,51,1160	0/0:27,0:27:75.24:0,75,1722	0/0:37,0:37:99:0,111,2554	0/0:20,0:20:60.21:0,60,1415	0/0:19,0:19:57.20:0,57,1346	0/0:34,0:34:99:0,102,2358	0/0:14,0:14:42.14:0,42,992	1/1:1,29:30:19.40:1449,19,0	1/1:3,27:30:84.27:1437,84,0	1/1:0,5:5:15.05:264,15,0
chr10	4086676	.	TGCGCGC	T	207.90	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=4.318;DP=433;FS=0.000;HRun=0;HaplotypeScore=90.8490;InbreedingCoeff=0.3017;MQ=74.09;MQ0=25;MQRankSum=-1.176;QD=2.74;ReadPosRankSum=-0.811;VQSLOD=1.2365;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:29:19.18:0,19,810	0/0:6,0:6:15.05:0,15,301	1/1:10,0:6:1.55:4,2,0	0/0:19,0:17:1.48:0,1,32	0/0:15,0:15:6.92:0,7,394	0/0:13,0:12:23.97:0,24,478	0/0:27,0:26:50.92:0,51,963	1/1:6,6:11:17.94:277,18,0	0/0:11,0:10:9.03:0,9,158	0/0:19,0:17:32.68:0,33,569	0/0:7,0:7:12.03:0,12,228	0/0:9,0:9:15.02:0,15,254	0/0:15,0:15:26.98:0,27,495	0/0:15,0:14:15.04:0,15,213	0/1:13,0:13:4.85:5,0,68	0/0:5,0:5:3.01:0,3,62	0/0:24,0:21:40.69:0,41,735	0/1:24,0:22:15.15:15,0,114	0/0:17,0:17:23.85:0,24,412	0/0:8,0:8:24.05:0,24,376	0/0:28,0:25:42.09:0,42,758	0/0:13,0:13:24.06:0,24,452	0/0:15,0:14:18.05:0,18,338	0/0:19,0:19:45.15:0,45,910	0/1:16,0:15:24.18:24,0,139	0/0:16,0:15:27:0,27,459	0/0:17,0:16:26.83:0,27,458	0/0:5,0:3:6.02:0,6,117
chr10	4088974	.	TAC	T	2390.49	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=10.195;DP=622;FS=2.391;HRun=0;HaplotypeScore=71.7890;InbreedingCoeff=0.9884;MQ=72.37;MQ0=0;MQRankSum=-2.387;QD=34.15;ReadPosRankSum=3.156;VQSLOD=5.7795;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:81.28:0,81,1448	0/0:18,0:18:54.19:0,54,971	0/0:18,0:18:51.13:0,51,832	0/0:19,0:19:42.08:0,42,740	0/0:27,0:27:78.27:0,78,1404	0/0:22,0:22:63.20:0,63,1080	0/0:21,0:21:57.20:0,57,1026	0/0:25,0:25:63.20:0,63,1056	0/0:18,0:18:51.17:0,51,918	0/0:26,0:26:69.24:0,69,1243	0/0:14,0:14:39.13:0,39,702	0/0:25,0:25:63.22:0,63,1124	0/0:20,0:20:60.18:0,60,1043	0/0:20,0:20:60.21:0,60,1080	0/0:27,0:27:81.28:0,81,1458	0/0:21,0:21:63.22:0,63,1126	0/0:26,0:26:72.25:0,72,1293	0/0:25,0:25:60.21:0,60,1072	0/0:23,0:23:60.21:0,60,1069	0/0:19,0:19:57.20:0,57,1025	0/0:28,0:28:84.29:0,84,1511	0/0:25,0:25:72.22:0,72,1237	0/0:11,0:11:24.08:0,24,423	0/0:19,0:19:54.19:0,54,972	0/0:26,0:26:78.27:0,78,1405	1/1:4,19:23:12.15:807,12,0	1/1:1,27:28:78.24:1093,78,0	1/1:0,19:19:45.15:630,45,0
chr10	4089993	.	TG	T	2195.64	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=6.957;DP=773;FS=1.674;HRun=1;HaplotypeScore=83.1253;InbreedingCoeff=0.9942;MQ=71.75;MQ0=0;MQRankSum=-1.795;QD=35.41;ReadPosRankSum=2.284;VQSLOD=3.8582;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,141,2212	0/0:13,0:13:39.13:0,39,618	0/0:25,0:23:65.90:0,66,1025	0/0:26,0:24:60.11:0,60,837	0/0:22,0:22:66.21:0,66,1009	0/0:23,0:23:69.23:0,69,1082	0/0:33,0:33:99:0,99,1583	0/0:20,0:20:60.19:0,60,936	0/0:28,0:28:84.25:0,84,1314	0/0:34,0:34:99:0,102,1541	0/0:22,0:22:66.23:0,66,1053	0/0:26,0:26:78.23:0,78,1199	0/0:26,0:26:78.27:0,78,1247	0/0:29,0:29:87.30:0,87,1372	0/0:26,0:26:78.27:0,78,1247	0/0:21,0:21:63.20:0,63,981	0/0:39,0:39:99:0,117,1833	0/0:27,0:27:78.26:0,78,1226	0/0:15,0:15:45.15:0,45,698	0/0:31,0:31:93.32:0,93,1486	0/0:72,0:72:99:0,214,3236	0/0:27,0:27:81.28:0,81,1285	0/0:28,0:28:78.27:0,78,1246	0/0:19,0:19:54.18:0,54,863	0/0:30,0:30:90.28:0,90,1375	1/1:1,27:28:36.30:1081,36,0	1/1:0,27:27:75.25:1046,75,0	1/1:0,7:7:15.05:210,15,0
chr10	4095854	.	GA	G	915.28	PASS	AB=0.832;AC=10;AF=0.179;AN=56;BaseQRankSum=1.239;DP=544;FS=8.566;HRun=13;HaplotypeScore=97.5198;InbreedingCoeff=0.5245;MQ=60.45;MQ0=6;MQRankSum=4.620;QD=6.73;ReadPosRankSum=5.967;VQSLOD=2.0841;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:23:24.63:0,25,124	0/1:7,0:7:3.86:4,0,114	0/0:13,0:5:7.47:0,7,51	0/1:13,1:10:14.31:20,0,14	0/0:21,0:23:37.05:0,37,375	0/0:20,0:20:32.43:0,32,283	0/0:23,0:23:47.84:0,48,427	0/0:26,0:19:32.41:0,32,170	0/0:17,2:20:16.44:0,16,259	0/0:22,2:26:4.69:0,5,321	0/0:11,0:10:29.86:0,30,245	0/1:10,2:12:0.87:1,0,148	0/0:18,0:18:27.61:0,28,232	0/0:13,1:15:10.94:0,11,236	1/1:2,12:16:27.91:185,28,0	0/0:17,0:17:9.07:0,9,201	1/1:10,26:37:36.56:377,37,0	1/1:6,19:26:14.64:260,15,0	0/0:18,0:20:50.85:0,51,453	0/0:16,0:16:32.89:0,33,286	0/0:14,1:15:10.25:0,10,199	0/0:18,1:20:22.10:0,22,341	0/0:21,2:23:20.03:0,20,312	0/0:17,0:18:32.17:0,32,338	0/1:7,16:23:11.82:220,0,12	0/0:30,0:29:63.04:0,63,350	0/0:13,0:11:27.46:0,27,145	0/0:12,0:11:21.58:0,22,117
chr10	4098209	.	T	TCACA	1524.98	PASS	AB=0.826;AC=13;AF=0.241;AN=54;BaseQRankSum=-0.498;DP=779;FS=6.567;HRun=0;HaplotypeScore=157.8307;InbreedingCoeff=0.8285;MQ=69.22;MQ0=9;MQRankSum=-0.300;QD=9.41;ReadPosRankSum=-3.249;VQSLOD=1.6684;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:43:27.59:0,28,242	0/0:12,0:11:14.90:0,15,179	1/1:30,0:22:2.37:8,2,0	./.	0/0:16,0:17:31.25:0,31,381	0/0:19,0:21:26.98:0,27,309	0/0:28,0:30:36.02:0,36,388	1/1:28,0:27:22.97:181,23,0	0/0:33,0:34:26.16:0,26,677	0/0:30,0:30:25.26:0,25,427	0/0:13,0:17:19.97:0,20,169	0/0:32,0:32:15.18:0,15,466	0/0:32,0:34:45.69:0,46,578	0/0:38,0:41:59.11:0,59,774	0/0:30,0:32:57.11:0,57,800	0/0:20,0:20:10.54:0,11,244	0/0:32,0:38:64.98:0,65,846	0/0:22,0:24:44.39:0,44,512	0/1:14,0:19:15.52:35,0,16	1/1:10,0:21:11.03:49,11,0	0/0:48,0:54:43.35:0,43,542	0/0:29,0:30:35.45:0,35,439	0/0:19,0:19:9.14:0,9,185	0/0:31,0:32:50.92:0,51,597	0/0:24,0:24:36.11:0,36,536	1/1:12,12:26:29.92:443,30,0	1/1:5,12:20:21.28:408,21,0	1/1:6,10:18:28.07:577,28,0
chr10	4098733	.	AC	A	1589.72	PASS	AB=0.889;AC=25;AF=0.446;AN=56;BaseQRankSum=2.413;DP=455;FS=3.548;HRun=11;HaplotypeScore=54.3361;InbreedingCoeff=-0.1123;MQ=75.26;MQ0=0;MQRankSum=0.209;QD=4.33;ReadPosRankSum=2.944;VQSLOD=0.3070;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:18,8:27:35.74:283,36,0	0/0:6,0:6:9.01:0,9,88	0/1:22,3:23:51.23:51,0,162	0/0:14,0:11:8:0,8,58	0/0:14,0:14:9.47:0,9,179	0/0:17,0:17:18.84:0,19,272	0/1:20,2:22:56:56,0,268	0/1:16,0:16:8.43:8,0,63	0/1:16,2:18:29.75:30,0,298	0/0:16,0:16:21.04:0,21,216	0/1:6,1:6:15.62:16,0,53	0/1:14,2:16:35.91:36,0,241	0/1:16,0:16:1.72:2,0,145	0/1:13,1:15:4.45:4,0,177	1/1:10,10:20:47.92:391,48,0	0/1:17,2:19:31.79:32,0,304	1/1:7,11:18:41.94:344,42,0	0/1:7,13:20:0.48:194,0,0	0/1:17,3:20:28.24:28,0,138	0/0:10,0:10:18.01:0,18,175	0/1:18,2:22:11.63:12,0,238	0/1:6,2:8:34.02:34,0,80	0/1:8,2:10:15.62:16,0,55	0/1:16,1:17:16.10:16,0,238	1/1:5,9:15:26.46:201,26,0	0/1:12,1:13:0.61:1,0,187	0/1:22,1:23:5.32:5,0,305	0/0:11,0:11:24.03:0,24,240
chr10	4099874	.	GGTGCGTGTGTGCGTGCGTGTGTGC	G	2915.93	PASS	AB=0.696;AC=7;AF=0.125;AN=56;BaseQRankSum=5.549;DP=710;FS=0.000;HRun=0;HaplotypeScore=413.2334;InbreedingCoeff=0.7172;MQ=73.28;MQ0=1;MQRankSum=-3.119;QD=40.50;ReadPosRankSum=-0.250;VQSLOD=1.0850;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:45.15:0,45,3366	0/0:8,0:8:12.04:0,12,1279	0/0:24,0:20:13.53:0,14,199	0/0:24,0:21:21.07:0,21,422	0/0:27,0:27:57.17:0,57,5085	0/0:22,0:22:48.15:0,48,4169	0/0:36,0:36:60.21:0,60,5607	1/1:19,0:19:9.02:110,9,0	0/0:22,0:22:45.15:0,45,3539	0/0:32,0:32:60.20:0,60,5268	0/0:11,0:11:27.09:0,27,2383	0/0:31,0:31:60.19:0,60,5571	0/0:26,0:26:51.17:0,51,3984	0/0:24,0:23:42.12:0,42,3088	0/0:28,0:28:60.21:0,60,5086	0/0:23,0:23:42.14:0,42,3396	0/0:18,0:24:18.06:0,18,448	0/0:28,0:28:60.21:0,60,5229	0/0:16,0:16:21.07:0,21,1884	0/0:14,0:14:27.09:0,27,2368	0/0:90,0:89:99:0,205,17061	0/0:16,0:16:30.10:0,30,2853	0/0:15,0:15:24.08:0,24,2093	0/0:46,0:46:99:0,105,9912	0/0:19,0:19:39.13:0,39,3336	0/1:18,14:32:99:2181,0,284	1/1:7,8:15:6.02:376,6,0	1/1:3,3:6:6.02:376,6,0
chr10	4099882	.	TGTGC	T	1002.30	PASS	AB=1.000;AC=8;AF=0.143;AN=56;BaseQRankSum=9.049;DP=712;FS=3.186;HRun=0;HaplotypeScore=128.2551;InbreedingCoeff=0.6306;MQ=69.21;MQ0=3;MQRankSum=-5.019;QD=10.23;ReadPosRankSum=3.539;VQSLOD=3.1635;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:5,24:29:45.15:788,45,0	0/0:7,0:7:18.02:0,18,376	0/0:21,0:16:18.36:0,18,273	0/0:28,0:21:46.04:0,46,777	0/0:28,0:28:75.20:0,75,1705	0/0:20,0:20:57.16:0,57,1305	0/0:36,0:36:96.26:0,96,2048	0/0:15,0:15:42.02:0,42,463	0/0:21,0:21:57.20:0,57,1376	0/0:30,0:30:78.26:0,78,1831	0/0:12,0:12:33.08:0,33,764	0/0:32,0:32:84.23:0,84,1868	0/0:25,0:25:69.15:0,69,1547	0/0:27,0:26:63.16:0,63,1289	0/0:26,0:26:72.22:0,72,1679	0/0:26,0:26:75.24:0,75,1588	0/1:21,0:21:63.13:63,0,337	0/0:27,0:27:75.24:0,75,1751	0/0:20,0:20:26.03:0,26,684	0/0:12,0:12:36.04:0,36,784	0/0:97,0:95:99:0,262,5941	0/0:20,0:20:48.16:0,48,1082	0/0:17,0:17:45.06:0,45,876	0/0:48,0:48:99:0,135,3196	0/0:19,0:19:51.17:0,51,1174	0/1:30,0:29:99:190,0,433	1/1:13,0:13:6:51,6,0	1/1:5,0:5:6:51,6,0
chr10	4101991	.	CT	C	574.47	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.552;DP=648;FS=0.947;HRun=1;HaplotypeScore=58.6412;InbreedingCoeff=0.9941;MQ=55.72;MQ0=77;MQRankSum=0.090;QD=31.91;ReadPosRankSum=1.088;VQSLOD=3.3212;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:17:31.39:0,31,215	0/0:10,0:7:21.06:0,21,312	0/0:31,1:22:37.24:0,37,797	0/0:28,0:14:39.05:0,39,528	0/0:24,0:20:57.16:0,57,863	0/0:12,0:11:30.10:0,30,468	0/0:20,0:18:51.17:0,51,814	0/0:30,0:17:51.17:0,51,814	0/0:16,0:12:33.11:0,33,527	0/0:24,0:20:54.13:0,54,815	0/0:24,0:15:42.13:0,42,649	0/0:26,0:18:42.14:0,42,660	0/0:36,0:23:57.10:0,57,836	0/0:20,0:15:45.10:0,45,678	0/0:20,0:13:39.13:0,39,623	0/0:17,0:14:38.93:0,39,612	1/1:0,18:18:48.16:669,48,0	0/0:17,0:16:48.16:0,48,767	0/0:18,0:14:42.14:0,42,666	0/0:32,0:24:69.22:0,69,1079	0/0:42,0:27:75.24:0,75,1173	0/0:24,0:18:48.15:0,48,745	0/0:17,0:12:33.10:0,33,504	0/0:20,0:14:42.04:0,42,617	0/0:35,0:29:84.25:0,84,1274	0/0:24,0:23:69.24:0,69,1102	0/0:19,0:17:51.17:0,51,807	0/0:21,0:21:63.21:0,63,1006
chr10	4105140	.	GA	G	1189.26	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=7.432;DP=679;FS=3.443;HRun=8;HaplotypeScore=68.6702;InbreedingCoeff=0.9887;MQ=76.53;MQ0=1;MQRankSum=-0.989;QD=19.82;ReadPosRankSum=1.946;VQSLOD=3.8839;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:69.17:0,69,817	0/0:15,0:15:34.11:0,34,453	0/0:26,0:24:50.20:0,50,505	0/0:26,0:24:37.10:0,37,435	0/0:26,0:27:72.01:0,72,808	0/0:19,0:19:48.14:0,48,567	0/0:28,0:28:72.20:0,72,847	0/0:31,0:31:84.23:0,84,985	0/0:35,0:35:84.23:0,84,987	0/0:25,0:25:57.63:0,58,670	0/0:17,0:18:38.99:0,39,449	0/0:29,0:29:75.19:0,75,862	0/0:21,0:21:60.15:0,60,689	0/0:35,0:35:93.28:0,93,1114	1/1:2,23:25:57.09:550,57,0	0/0:22,0:22:60.09:0,60,685	0/0:20,0:20:57.09:0,57,657	1/1:3,15:18:36.06:347,36,0	0/0:29,1:30:46.23:0,46,812	0/0:38,0:38:90.28:0,90,1087	0/0:14,0:14:30.09:0,30,362	0/0:24,0:24:54.14:0,54,630	0/0:21,0:21:51.13:0,51,591	0/0:27,0:27:72.20:0,72,857	1/1:1,16:17:45.07:434,45,0	0/0:30,0:30:75.22:0,75,887	0/0:27,0:27:75.21:0,75,884	0/0:4,0:4:12.04:0,12,145
chr10	4110206	.	GCACGCC	G	3034.41	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=10.066;DP=691;FS=6.653;HRun=0;HaplotypeScore=138.7782;InbreedingCoeff=0.9858;MQ=81.70;MQ0=0;MQRankSum=-11.040;QD=50.57;ReadPosRankSum=0.234;VQSLOD=3.0338;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:56:99:0,166,5646	0/0:10,0:10:27.09:0,27,932	0/0:26,0:26:69.24:0,69,2441	0/0:19,0:19:54.15:0,54,1711	0/0:13,0:13:39.12:0,39,1285	0/0:25,0:25:72.25:0,72,2474	0/0:43,0:43:99:0,129,4230	0/0:31,0:31:90.30:0,90,2960	0/0:30,0:30:87.28:0,87,2942	0/0:23,0:23:66.23:0,66,2294	0/0:16,0:16:48.16:0,48,1680	0/0:20,0:20:60.19:0,60,2076	0/0:22,0:22:63.20:0,63,2170	0/0:18,0:18:51.18:0,51,1797	1/1:1,31:32:84.29:1974,84,0	0/0:29,0:29:87.30:0,87,3113	0/0:33,0:33:99:0,99,3361	1/1:3,8:11:18.06:413,18,0	0/0:25,0:25:60.21:0,60,2070	0/0:21,0:21:63.22:0,63,2214	0/0:39,0:39:99:0,114,3807	0/0:20,0:20:51.13:0,51,1658	0/0:20,0:20:60.21:0,60,2136	0/0:28,0:28:84.29:0,84,2946	1/1:1,16:17:33.11:788,33,0	0/0:28,0:28:81.28:0,81,2884	0/0:32,0:32:96.25:0,96,3033	0/0:4,0:4:12.04:0,12,432
chr10	4110612	.	TA	T	314.97	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.001;DP=524;FS=1.060;HRun=4;HaplotypeScore=60.6592;InbreedingCoeff=0.9825;MQ=90.85;MQ0=0;MQRankSum=-5.391;QD=10.86;ReadPosRankSum=0.565;VQSLOD=0.8069;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,8:16:27.07:296,27,0	0/0:10,0:10:30.10:0,30,419	0/0:19,0:19:57.15:0,57,733	0/0:26,0:26:75.03:0,75,930	0/0:19,0:19:57.18:0,57,773	0/0:17,0:17:51.16:0,51,696	0/0:19,0:19:57.16:0,57,748	0/0:33,0:33:90.28:0,90,1210	0/0:18,0:18:54.18:0,54,751	0/0:26,0:26:75.25:0,75,1050	0/0:16,0:16:42.14:0,42,587	0/0:20,0:20:60.20:0,60,838	0/0:19,0:19:54.18:0,54,755	0/0:15,0:15:45.14:0,45,613	0/0:21,0:21:63.21:0,63,882	0/0:17,0:17:51.15:0,51,682	1/1:9,4:12:12.03:135,12,0	0/0:19,0:19:54.16:0,54,738	0/0:19,0:19:51.17:0,51,714	0/0:19,0:19:57.16:0,57,749	0/0:24,0:24:72.22:0,72,985	0/0:12,0:12:36.11:0,36,486	0/0:18,0:18:54.17:0,54,741	0/0:26,0:26:78.25:0,78,1072	0/0:20,0:20:57.19:0,57,797	0/0:19,0:19:57.16:0,57,751	0/0:15,0:15:45.13:0,45,610	0/0:9,0:9:27.09:0,27,378
chr10	4110618	.	CCAACAACCAAA	C	1100.32	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.800;DP=527;FS=0.000;HRun=0;HaplotypeScore=169.1361;InbreedingCoeff=0.9819;MQ=92.43;MQ0=0;MQRankSum=-5.465;QD=91.69;ReadPosRankSum=1.311;VQSLOD=3.2694;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,8:8:24.08:868,24,0	0/0:10,0:10:30.10:0,30,1740	0/0:21,0:21:63.22:0,63,2981	0/0:25,0:26:75.25:0,75,3904	0/0:20,0:20:60.21:0,60,3363	0/0:18,0:18:54.19:0,54,3115	0/0:21,0:21:63.21:0,63,3203	0/0:29,0:29:87.30:0,87,4826	0/0:19,0:19:57.20:0,57,3174	0/0:28,0:28:84.29:0,84,4758	0/0:14,0:14:42.14:0,42,2421	0/0:24,0:24:72.25:0,72,4213	0/0:19,0:19:57.20:0,57,3384	0/0:15,0:15:45.15:0,45,2571	0/0:24,0:24:72.25:0,72,4004	0/0:19,0:19:57.20:0,57,3301	1/1:1,3:4:12.01:349,12,0	0/0:20,0:20:60.18:0,60,3389	0/0:17,0:17:51.18:0,51,2597	0/0:21,0:21:63.22:0,63,3658	0/0:27,0:27:81.25:0,81,4448	0/0:13,0:13:39.13:0,39,2200	0/0:21,0:21:63.22:0,63,3640	0/0:24,0:24:72.24:0,72,3990	0/0:19,0:19:57.20:0,57,3080	0/0:20,0:20:60.21:0,60,3359	0/0:17,0:17:51.18:0,51,2799	0/0:9,0:9:27.09:0,27,1601
chr10	4112300	.	T	TATACAC	1178.12	PASS	AB=1.000;AC=11;AF=0.220;AN=50;BaseQRankSum=6.207;DP=595;FS=11.193;HRun=0;HaplotypeScore=117.3805;InbreedingCoeff=0.1925;MQ=55.89;MQ0=16;MQRankSum=-1.119;QD=6.01;ReadPosRankSum=0.231;VQSLOD=1.7079;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:53.78:0,54,418	0/0:12,0:12:25.22:0,25,202	./.	./.	0/0:29,0:29:50.55:0,51,408	0/0:17,0:17:16.22:0,16,274	0/0:19,0:18:43.19:0,43,351	0/0:33,0:25:68.85:0,69,581	0/0:24,0:24:69.04:0,69,960	0/1:27,0:26:14.68:15,0,461	0/1:19,0:19:99:105,0,165	0/1:25,0:25:6.32:6,0,235	0/0:28,0:27:6.28:0,6,340	0/0:22,0:21:14:0,14,396	1/1:23,0:23:50.68:509,51,0	0/0:14,0:14:4.98:0,5,177	0/1:32,0:28:14.23:14,0,375	1/1:23,0:24:44.68:576,45,0	0/1:18,0:16:0.25:0,0,278	0/0:25,0:25:62.92:0,63,524	0/1:14,0:13:57.56:58,0,201	0/0:4,0:4:8.99:0,9,75	0/1:14,0:14:41.92:42,0,146	0/0:9,0:9:23.86:0,24,180	./.	0/0:42,0:42:48.84:0,49,1068	0/0:30,0:30:90.01:0,90,1176	0/0:16,0:16:32.88:0,33,663
chr10	4113830	.	T	TTCGGG	3105.63	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-7.331;DP=652;FS=3.058;HRun=0;HaplotypeScore=117.4307;InbreedingCoeff=0.9629;MQ=77.33;MQ0=0;MQRankSum=-1.656;QD=69.01;ReadPosRankSum=1.496;VQSLOD=4.9977;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,108,2155	0/0:4,0:4:12.04:0,12,244	0/0:15,0:15:19.81:0,20,300	0/0:17,0:17:24.34:0,24,367	0/0:20,0:20:54.15:0,54,1023	0/0:20,0:20:57.20:0,57,1158	0/0:24,0:24:63.16:0,63,1200	0/0:24,0:24:51.17:0,51,1002	0/0:17,0:17:51.17:0,51,1016	0/0:24,0:24:69.20:0,69,1361	0/0:15,0:15:42.14:0,42,840	0/0:34,0:34:87.30:0,87,1755	0/0:27,0:27:69.22:0,69,1354	0/0:23,0:23:66.23:0,66,1330	0/0:19,0:19:51.18:0,51,1036	0/0:12,0:12:30.10:0,30,609	1/1:6,38:45:99:3200,108,0	0/0:37,0:37:96.31:0,96,1896	0/0:25,0:25:69.22:0,69,1315	0/0:19,0:19:48.10:0,48,862	0/0:39,0:39:99:0,111,2228	0/0:15,0:15:39.13:0,39,789	0/0:17,0:17:45.15:0,45,902	0/0:22,0:22:60.16:0,60,1177	0/0:30,0:30:81.23:0,81,1593	0/0:28,0:28:75.26:0,75,1515	0/0:29,0:29:81.26:0,81,1597	0/0:14,0:14:42.14:0,42,853
chr10	4115248	.	A	AAAAC	1120.66	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-4.012;DP=879;FS=6.746;HRun=0;HaplotypeScore=147.3401;InbreedingCoeff=0.9392;MQ=62.42;MQ0=2;MQRankSum=-4.726;QD=37.36;ReadPosRankSum=-4.562;VQSLOD=2.1447;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,135,2141	0/0:12,0:12:24.08:0,24,394	0/0:25,0:18:12.35:0,12,338	0/0:32,0:27:11.92:0,12,547	0/0:33,0:33:84.22:0,84,1259	0/0:28,0:28:69.24:0,69,1147	0/0:30,0:30:81.23:0,81,1252	1/1:12,15:29:60.65:1215,61,0	0/0:26,0:26:63.21:0,63,1035	0/0:31,0:31:63.22:0,63,1054	0/0:19,0:19:45.14:0,45,727	0/0:35,0:35:90.31:0,90,1481	0/0:43,0:43:96.25:0,96,1496	0/0:45,0:45:99:0,114,1855	0/0:25,0:25:75.21:0,75,1156	0/0:21,0:21:54.15:0,54,813	0/0:33,0:33:87.28:0,87,1434	0/0:40,0:40:99:0,108,1732	0/0:22,0:22:24.08:0,24,399	0/0:31,0:31:81.28:0,81,1346	0/0:44,0:44:99:0,108,1756	0/0:26,0:26:63.22:0,63,1058	0/0:27,0:27:60.19:0,60,947	0/0:52,0:52:99:0,141,2355	0/0:34,0:34:84.29:0,84,1386	0/0:42,0:42:93.29:0,93,1512	0/0:29,0:29:78.27:0,78,1295	0/0:10,0:10:30.09:0,30,470
chr10	4118771	.	T	TA	458.75	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=-1.996;DP=476;FS=2.880;HRun=8;HaplotypeScore=51.1892;InbreedingCoeff=0.6162;MQ=74.74;MQ0=0;MQRankSum=-0.458;QD=12.74;ReadPosRankSum=-0.491;VQSLOD=2.5908;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:35.98:0,36,321	0/0:11,0:11:33.02:0,33,302	0/0:18,0:14:23.55:0,24,211	0/1:14,0:13:21.54:22,0,124	0/0:27,0:27:67.97:0,68,589	0/0:20,0:20:45.02:0,45,412	0/0:9,0:9:27:0,27,242	0/0:26,0:26:57.01:0,57,518	0/0:12,0:12:30.01:0,30,269	0/0:28,0:28:72.03:0,72,658	0/0:26,0:26:60.02:0,60,548	0/0:12,0:12:27.01:0,27,247	0/0:13,0:13:33.01:0,33,302	0/0:9,0:9:23.89:0,24,207	0/0:13,0:13:33:0,33,298	0/0:9,0:9:21:0,21,192	1/1:4,18:22:48.13:543,48,0	0/0:28,0:28:75:0,75,676	0/0:26,0:26:69.02:0,69,627	0/0:18,0:18:42.02:0,42,384	0/0:6,0:6:17.99:0,18,159	0/0:13,0:13:36.02:0,36,329	0/0:23,0:23:41.66:0,42,462	0/0:10,0:10:21.01:0,21,192	0/0:16,0:16:42.02:0,42,384	0/0:27,0:27:59.98:0,60,544	0/0:18,0:18:51.02:0,51,463	0/0:7,0:7:9.72:0,10,130
chr10	4118846	.	GT	G	750.27	PASS	AB=0.911;AC=13;AF=0.232;AN=56;BaseQRankSum=4.794;DP=539;FS=8.800;HRun=14;HaplotypeScore=66.5244;InbreedingCoeff=0.6085;MQ=76.69;MQ0=12;MQRankSum=-0.324;QD=4.06;ReadPosRankSum=-0.637;VQSLOD=0.4886;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:6,11:17:4.58:124,5,0	0/0:6,0:6:17.99:0,18,159	0/1:62,1:23:26.78:27,0,56	0/0:49,1:21:14.94:0,15,122	0/0:18,1:20:21.28:0,21,323	0/0:16,0:16:39.04:0,39,362	0/1:13,2:15:2.11:2,0,263	1/1:4,1:24:39.81:128,40,0	0/0:14,0:16:14.21:0,14,253	0/0:10,0:10:23.69:0,24,202	0/0:18,0:18:38.23:0,38,321	0/0:11,0:11:14.97:0,15,130	0/0:15,1:18:10.01:0,10,301	0/0:16,1:17:18.53:0,19,300	0/0:13,2:15:21.46:0,21,340	0/0:8,1:10:3.28:0,3,161	0/0:6,0:25:45.37:0,45,272	0/0:25,3:29:13.04:0,13,508	0/0:27,0:33:64.44:0,64,557	0/1:10,2:13:14.31:14,0,150	0/0:5,0:5:6.01:0,6,56	0/0:8,2:11:6.04:0,6,173	0/0:18,0:19:47.86:0,48,423	0/0:12,0:12:33:0,33,296	0/0:11,0:12:20.14:0,20,228	1/1:7,12:20:9.82:202,10,0	1/1:2,18:22:42.74:279,43,0	1/1:0,9:9:20.83:144,21,0
chr10	4119284	.	A	AC	242.32	PASS	AC=8;AF=0.211;AN=38;BaseQRankSum=-1.461;DP=79;FS=0.000;HRun=5;HaplotypeScore=12.2597;InbreedingCoeff=0.5059;MQ=61.56;MQ0=13;MQRankSum=1.518;QD=16.15;ReadPosRankSum=-1.121;VQSLOD=1.0255;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,1:2:3.01:41,3,0	./.	0/0:7,0:3:8.89:0,9,81	0/0:11,0:3:5.68:0,6,49	0/0:3,0:2:6.02:0,6,68	0/0:5,0:4:12.03:0,12,136	0/0:9,0:7:15.03:0,15,160	1/1:2,1:2:3.01:41,3,0	0/0:2,0:2:6.02:0,6,68	0/0:5,0:3:9.03:0,9,102	./.	./.	./.	0/0:3,0:3:9.03:0,9,102	0/0:4,0:4:6.02:0,6,68	./.	1/1:4,0:4:9.03:117,9,0	0/0:4,0:4:8.98:0,9,90	0/0:3,0:1:3.01:0,3,34	0/0:1,0:1:3.01:0,3,34	0/0:2,0:2:2.99:0,3,24	0/0:1,0:1:3.01:0,3,34	./.	0/0:4,0:4:9.01:0,9,92	./.	1/1:1,4:4:12.04:162,12,0	./.	./.
chr10	4120067	.	TG	T	2712.25	PASS	AB=0.520;AC=5;AF=0.089;AN=56;BaseQRankSum=10.229;DP=650;FS=4.870;HRun=2;HaplotypeScore=61.3159;InbreedingCoeff=0.7965;MQ=91.79;MQ0=0;MQRankSum=-2.028;QD=34.77;ReadPosRankSum=2.222;VQSLOD=4.2029;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:93.32:0,93,1393	0/0:14,0:14:42.14:0,42,629	0/0:27,0:27:78.26:0,78,1120	0/0:26,0:26:65.41:0,65,1019	0/0:23,0:23:69.22:0,69,1010	0/0:19,0:19:57.19:0,57,853	0/0:29,0:29:84.25:0,84,1217	0/0:24,0:24:54.18:0,54,785	0/0:27,0:27:78.26:0,78,1166	0/0:39,0:39:99:0,111,1624	0/0:21,0:21:63.20:0,63,924	0/0:23,0:23:69.23:0,69,1032	0/0:20,0:20:57.19:0,57,854	0/0:19,0:19:57.18:0,57,833	0/0:31,0:31:90.28:0,90,1309	0/0:17,0:17:51.17:0,51,764	0/0:32,0:32:93.29:0,93,1347	0/0:15,0:15:45.13:0,45,647	0/0:18,0:18:51.17:0,51,732	0/0:18,0:18:51.16:0,51,743	0/0:21,0:21:54.16:0,54,768	0/0:23,0:23:69.23:0,69,1029	0/0:16,0:16:48.15:0,48,699	0/0:19,0:19:57.19:0,57,854	0/0:19,0:19:54.18:0,54,809	0/1:2,24:26:11.70:856,0,12	1/1:1,39:40:99:1518,117,0	1/1:0,12:12:36.12:467,36,0
chr10	4122814	.	ATGTG	A	1572.35	PASS	AB=0.909;AC=12;AF=0.222;AN=54;BaseQRankSum=4.748;DP=866;FS=8.869;HRun=0;HaplotypeScore=165.9206;InbreedingCoeff=0.6444;MQ=60.24;MQ0=15;MQRankSum=-1.543;QD=8.23;ReadPosRankSum=-0.325;VQSLOD=2.1167;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:27:6.77:40,7,0	0/0:11,0:13:17.78:0,18,279	./.	0/0:38,0:23:3.01:0,3,71	0/1:20,1:23:14.81:15,0,444	0/0:33,0:35:16.78:0,17,1060	0/0:24,0:28:36:0,36,791	0/0:18,0:22:2.92:0,3,17	0/0:24,0:26:36.31:0,36,741	0/0:42,0:42:60.07:0,60,1033	0/1:24,0:25:7.26:7,0,506	0/0:40,0:43:65.64:0,66,1156	0/0:34,0:36:42.62:0,43,1113	0/0:26,0:27:2.47:0,2,764	0/0:23,0:50:8.06:0,8,420	0/0:22,0:22:33.11:0,33,742	1/1:15,0:25:6.01:56,6,0	0/0:16,0:16:15.94:0,16,284	0/0:26,0:26:29.53:0,30,424	0/0:35,0:38:35.63:0,36,649	0/0:35,0:50:26.64:0,27,421	0/0:29,0:30:15.07:0,15,652	0/0:24,0:28:41.82:0,42,774	0/0:42,0:45:76.97:0,77,1319	0/0:11,0:21:20.09:0,20,301	1/1:23,17:40:53.66:780,54,0	1/1:19,7:26:32.32:461,32,0	1/1:12,11:23:24.08:379,24,0
chr10	4123102	.	TGA	T	3857.87	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=14.403;DP=1075;FS=3.367;HRun=0;HaplotypeScore=157.1458;InbreedingCoeff=1.0000;MQ=67.52;MQ0=0;MQRankSum=-2.278;QD=36.40;ReadPosRankSum=0.778;VQSLOD=5.2542;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:46:74.26:0,74,1825	0/0:15,0:15:45.13:0,45,790	0/0:35,0:34:86.16:0,86,1398	0/0:41,0:40:99:0,101,1754	0/0:30,0:30:84.27:0,84,1494	0/0:57,0:57:99:0,162,2847	0/0:43,0:43:99:0,120,2060	0/0:50,0:50:99:0,141,2361	0/0:47,1:48:99:0,107,2404	0/0:54,0:54:99:0,153,2688	0/0:21,0:21:57:0,57,1005	0/0:48,0:48:99:0,135,2335	0/0:40,0:40:99:0,114,1991	0/0:42,0:42:99:0,126,2203	0/0:49,0:49:99:0,141,2517	0/0:52,0:52:99:0,147,2589	0/0:26,0:27:72.14:0,72,1280	0/0:14,0:14:42.14:0,42,757	0/0:22,0:22:59.23:0,59,1035	0/0:34,0:34:96.29:0,96,1708	0/0:73,0:74:99:0,204,3667	0/0:30,0:30:81.27:0,81,1453	0/0:23,0:23:69.20:0,69,1167	0/0:42,2:44:99:0,110,1957	0/0:30,0:30:81.25:0,81,1451	1/1:17,47:63:73.50:2311,73,0	1/1:3,22:25:69.21:964,69,0	1/1:4,13:17:43.48:582,43,0
chr10	4123163	.	G	GA	4077.65	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=13.319;DP=1073;FS=10.743;HRun=1;HaplotypeScore=139.9024;InbreedingCoeff=0.9993;MQ=62.99;MQ0=2;MQRankSum=-2.818;QD=38.11;ReadPosRankSum=0.234;VQSLOD=1.6977;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:84.02:0,84,1073	0/0:8,0:8:24.08:0,24,312	0/0:44,0:41:99:0,115,1441	0/0:42,0:37:89.06:0,89,1170	0/0:32,0:32:87.24:0,87,1085	0/0:47,0:47:99:0,123,1597	0/0:38,0:38:99:0,108,1387	0/0:45,0:45:99:0,126,1612	0/0:48,0:48:99:0,122,1650	0/0:50,0:50:99:0,150,1948	0/0:34,0:34:99:0,99,1270	0/0:57,0:57:99:0,162,2074	0/0:41,0:41:99:0,123,1592	0/0:32,0:32:93.30:0,93,1207	0/0:47,0:47:99:0,138,1763	0/0:48,0:48:99:0,141,1816	0/0:23,0:23:60.18:0,60,755	0/0:23,0:23:63.17:0,63,792	0/0:20,0:20:57.19:0,57,740	0/0:45,0:45:99:0,132,1684	0/0:60,0:59:99:0,166,2141	0/0:44,0:44:99:0,129,1661	0/0:27,0:27:78.23:0,78,995	0/0:44,0:44:99:0,114,1479	0/0:33,0:33:93.30:0,93,1207	1/1:7,39:45:54.89:1766,55,0	1/1:5,38:43:99:1638,111,0	1/1:0,18:18:45.15:674,45,0
chr10	4123326	.	G	GTA	4699.02	PASS	AB=0.560;AC=11;AF=0.196;AN=56;BaseQRankSum=-9.015;DP=835;FS=0.784;HRun=0;HaplotypeScore=105.2973;InbreedingCoeff=0.8111;MQ=66.62;MQ0=0;MQRankSum=0.768;QD=27.32;ReadPosRankSum=-2.017;VQSLOD=5.2092;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,2:19:33.01:313,33,0	0/0:11,0:11:24.08:0,24,300	0/0:11,0:11:11.21:0,11,167	0/0:18,0:18:23.68:0,24,255	0/0:34,0:34:90.29:0,90,1125	0/0:36,0:36:99:0,99,1211	0/0:22,0:22:53.58:0,54,590	1/1:9,28:38:52.70:1285,53,0	0/0:29,0:29:69.21:0,69,852	0/0:65,0:65:99:0,162,1975	0/0:26,0:28:72.02:0,72,837	0/0:42,0:41:99:0,105,1261	0/0:26,0:26:66.19:0,66,811	0/0:26,0:26:69.03:0,69,815	0/0:27,0:27:51.14:0,51,612	0/0:37,0:39:99:0,105,1249	1/1:5,0:7:5.86:35,6,0	0/0:12,0:11:24.08:0,24,300	0/0:25,0:25:45.13:0,45,541	0/0:49,0:50:99:0,111,1326	0/0:32,0:32:90.24:0,90,1095	0/0:34,0:34:93.24:0,93,1109	0/0:33,0:33:75.22:0,75,924	0/0:29,0:29:78.23:0,78,974	0/0:34,0:34:72.21:0,72,885	0/1:11,37:51:26.70:1607,0,27	1/1:6,31:38:3.22:1112,3,0	1/1:7,11:18:21.07:346,21,0
chr10	4123417	.	TGA	T	885.56	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.621;DP=989;FS=0.666;HRun=0;HaplotypeScore=147.4705;InbreedingCoeff=0.9996;MQ=59.18;MQ0=3;MQRankSum=2.024;QD=30.54;ReadPosRankSum=-4.253;VQSLOD=4.1011;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:40:50.91:0,51,1049	0/0:13,0:13:36.08:0,36,605	0/0:40,0:28:70.55:0,71,1093	0/0:35,0:31:68.04:0,68,999	0/0:29,0:29:78.21:0,78,1281	0/0:39,0:39:99:0,105,1763	0/0:36,0:36:93.24:0,93,1454	1/1:4,25:29:75.21:980,75,0	0/0:36,0:36:93.29:0,93,1580	0/0:64,0:64:99:0,163,2739	0/0:32,0:32:87.24:0,87,1423	0/0:43,0:42:99:0,117,1934	0/0:40,0:40:99:0,111,1872	0/0:30,0:30:81.28:0,81,1419	0/0:43,0:43:99:0,117,1945	0/0:33,0:33:87.25:0,87,1432	0/0:19,0:20:33.04:0,33,657	0/0:30,0:29:63.11:0,63,1062	0/0:25,0:24:69.20:0,69,1099	0/0:28,0:28:75.23:0,75,1265	0/0:57,0:57:99:0,156,2515	0/0:39,0:39:99:0,117,1958	0/0:31,0:31:78.05:0,78,1220	0/0:35,0:35:87.27:0,87,1498	0/0:29,0:29:75.09:0,75,1128	0/0:51,0:51:99:0,132,2099	0/0:36,0:36:96.33:0,96,1689	0/0:25,0:25:47.57:0,48,1092
chr10	4123736	.	GTGTGTATATGTATGAGAGAATAT	G	6774.46	PASS	AB=0.591;AC=5;AF=0.089;AN=56;BaseQRankSum=11.355;DP=919;FS=0.000;HRun=0;HaplotypeScore=521.0915;InbreedingCoeff=0.7783;MQ=66.75;MQ0=1;MQRankSum=-7.701;QD=69.13;ReadPosRankSum=2.974;VQSLOD=2.2717;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:75.26:0,75,5377	0/0:12,0:12:33.11:0,33,3433	0/0:31,0:30:84.25:0,84,4882	0/0:33,0:33:96.33:0,96,6279	0/0:34,0:34:96.33:0,96,8017	0/0:25,0:25:72.25:0,72,5706	0/0:45,0:45:99:0,126,9264	0/0:36,0:36:93.31:0,93,5797	0/0:34,0:34:99:0,99,8232	0/0:34,0:34:96.33:0,96,8404	0/0:30,0:30:84.26:0,84,7101	0/0:41,0:41:99:0,117,9907	0/0:36,0:36:93.78:0,94,8234	0/0:25,0:25:75.26:0,75,6134	0/0:51,0:51:99:0,139,12905	0/0:32,0:32:96.30:0,96,8087	0/0:25,0:24:72.25:0,72,5696	0/0:22,0:22:62.24:0,62,5139	0/0:23,0:23:66.23:0,66,4712	0/0:40,0:40:99:0,114,10702	0/0:51,0:51:99:0,145,12552	0/0:34,0:34:96.33:0,96,8507	0/0:36,0:36:99:0,102,8216	0/0:27,0:26:72.19:0,72,6089	0/0:34,0:34:93.32:0,93,7805	0/1:12,27:39:99:3138,0,134	1/1:8,28:36:38.87:2322,39,0	1/1:6,17:23:21.07:1315,21,0
chr10	4123759	.	TTG	T	966.40	PASS	AB=1.000;AC=6;AF=0.107;AN=56;BaseQRankSum=10.859;DP=916;FS=3.162;HRun=0;HaplotypeScore=157.7094;InbreedingCoeff=0.6177;MQ=64.71;MQ0=0;MQRankSum=-7.933;QD=9.20;ReadPosRankSum=4.792;VQSLOD=3.2138;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:36.05:0,36,600	0/0:16,0:16:48.16:0,48,837	0/0:38,0:35:57.14:0,57,1350	0/0:38,0:36:92.71:0,93,1384	0/0:34,0:34:90.25:0,90,1478	0/0:27,0:27:75.24:0,75,1276	0/0:36,0:36:96.33:0,96,1683	0/0:43,0:43:99:0,116,1960	0/0:40,0:40:99:0,117,2036	0/0:36,0:36:99:0,102,1762	0/0:26,0:26:75.26:0,75,1315	0/0:42,0:42:99:0,117,2050	0/0:33,0:33:87.29:0,87,1497	0/0:28,0:28:81.25:0,81,1350	0/0:52,0:52:99:0,135,2348	0/0:26,0:26:78.25:0,78,1334	1/1:10,18:27:59.63:805,60,0	0/0:22,0:22:57.19:0,57,978	0/0:21,0:21:48.08:0,48,738	0/0:40,0:40:99:0,105,1832	0/0:58,0:57:99:0,154,2606	0/0:38,0:38:99:0,105,1769	0/0:32,0:32:87.25:0,87,1513	0/0:32,0:31:81.23:0,81,1409	0/0:28,0:28:69.23:0,69,1210	0/1:29,0:29:47.80:114,0,48	1/1:29,0:29:11.31:121,11,0	0/1:19,0:19:14.76:60,0,15
chr10	4123863	.	AAGAGAGAGAGAGAGAG	A	144.10	PASS	AC=4;AF=0.080;AN=50;BaseQRankSum=5.186;DP=704;FS=7.517;HRun=0;HaplotypeScore=283.0315;InbreedingCoeff=0.7678;MQ=60.15;MQ0=19;MQRankSum=-5.242;QD=2.25;ReadPosRankSum=-4.364;VQSLOD=0.3886;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:13.04:0,13,662	0/0:6,0:7:15.05:0,15,525	./.	./.	0/0:29,0:30:21.07:0,21,1005	0/0:23,0:23:24.80:0,25,1079	0/0:25,0:24:29.67:0,30,1176	./.	0/0:15,0:17:24.08:0,24,1255	0/0:36,0:35:60.19:0,60,3084	0/0:20,0:19:15.05:0,15,813	0/0:30,0:32:57.17:0,57,3041	0/0:28,0:27:45.15:0,45,2619	0/0:24,0:24:42.14:0,42,2245	1/1:23,19:43:21.46:231,21,0	0/0:27,0:30:60.21:0,60,3608	0/0:18,0:17:29.05:0,29,975	0/0:10,0:9:3.01:0,3,49	0/0:14,0:14:20.36:0,20,536	0/0:20,0:20:11.70:0,12,652	0/0:37,0:34:27.09:0,27,1238	0/0:30,0:29:30.08:0,30,1574	0/0:25,0:24:24.08:0,24,1104	0/0:27,0:29:36.12:0,36,2275	1/1:13,7:21:2.78:16,3,0	0/0:31,0:31:55.73:0,56,2418	0/0:21,0:23:42.14:0,42,2552	0/0:28,0:26:33.11:0,33,1755
chr10	4127289	.	CCG	C	3908.21	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=13.170;DP=685;FS=3.098;HRun=0;HaplotypeScore=92.5255;InbreedingCoeff=0.9994;MQ=83.15;MQ0=0;MQRankSum=-5.983;QD=42.48;ReadPosRankSum=0.679;VQSLOD=5.2628;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,144,2828	0/0:10,0:10:30.09:0,30,572	0/0:18,0:18:54.16:0,54,1018	0/0:23,0:23:66.23:0,66,1313	0/0:28,0:28:84.29:0,84,1683	0/0:22,0:22:66.23:0,66,1338	0/0:32,0:32:96.31:0,96,1911	1/1:0,16:16:48.16:734,48,0	0/0:18,0:18:54.19:0,54,1077	0/0:28,0:28:84.29:0,84,1690	0/0:20,0:20:60.21:0,60,1216	0/0:26,0:26:78.27:0,78,1578	0/0:29,0:29:87.30:0,87,1743	0/0:27,0:27:81.26:0,81,1606	0/0:19,0:19:57.18:0,57,1118	0/0:28,0:28:84.29:0,84,1687	0/0:3,0:30:75.17:0,75,841	0/0:12,0:12:30.10:0,30,609	0/0:18,0:18:51.17:0,51,1002	0/0:27,0:27:81.28:0,81,1636	0/0:35,0:34:99:0,102,2047	0/0:15,0:15:45.14:0,45,861	0/0:21,0:21:63.22:0,63,1258	0/0:37,0:37:99:0,111,2250	0/0:22,0:22:66.20:0,66,1302	1/1:2,28:30:26.36:1199,26,0	1/1:3,29:32:87.29:1332,87,0	1/1:0,14:14:42.14:643,42,0
chr10	4128464	.	TTG	T	400.12	PASS	AB=0.950;AC=22;AF=0.478;AN=46;BaseQRankSum=4.506;DP=648;FS=1.972;HRun=0;HaplotypeScore=95.8802;InbreedingCoeff=-0.0734;MQ=65.59;MQ0=17;MQRankSum=-2.111;QD=1.00;ReadPosRankSum=1.368;VQSLOD=1.9068;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	0/0:9,0:10:1.02:0,1,158	./.	./.	0/0:18,0:18:9.01:0,9,111	0/0:18,0:18:9.02:0,9,104	0/1:30,0:29:11.34:11,0,99	./.	0/1:20,1:21:22.63:23,0,63	0/0:19,0:19:3.48:0,3,44	0/1:16,0:16:45.20:45,0,52	0/1:20,2:22:19.60:20,0,117	0/0:13,0:13:3.01:0,3,44	0/0:18,0:17:8.62:0,9,96	1/1:13,0:20:11.20:53,11,0	0/1:21,1:22:22.62:23,0,58	1/1:29,5:31:9.02:95,9,0	1/1:16,0:23:4.92:27,5,0	0/0:24,0:23:2.99:0,3,24	0/1:22,4:26:10.57:11,0,226	0/1:37,6:40:22.63:23,0,52	0/1:25,2:26:19.60:20,0,115	0/1:17,0:16:5.41:5,0,51	0/1:38,0:37:52.91:53,0,179	1/1:13,0:17:2.84:14,3,0	./.	1/1:17,0:28:19.62:97,20,0	1/1:15,0:15:5.68:28,6,0
chr10	4128487	.	T	TCC	57.95	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-2.100;DP=623;FS=1.849;HRun=0;HaplotypeScore=93.7996;InbreedingCoeff=0.8734;MQ=51.46;MQ0=36;MQRankSum=2.471;QD=8.28;ReadPosRankSum=-3.466;VQSLOD=2.9237;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:34:64.02:0,64,879	0/0:7,0:7:21.04:0,21,310	0/0:16,0:7:21.05:0,21,282	0/0:32,0:10:24.02:0,24,372	0/0:19,0:19:45.14:0,45,661	0/0:16,0:15:36.12:0,36,533	0/0:30,0:29:66.22:0,66,992	1/1:1,3:7:6.13:138,6,0	0/0:20,0:20:39.10:0,39,561	0/0:17,0:16:46.97:0,47,691	0/0:15,0:15:42.11:0,42,575	0/0:29,0:28:64.92:0,65,877	0/0:10,0:10:24.08:0,24,362	0/0:20,0:18:39.07:0,39,518	0/0:22,0:20:47.87:0,48,624	0/0:24,0:23:56.77:0,57,823	0/0:31,0:28:74.95:0,75,1019	0/0:21,0:21:42.05:0,42,546	0/0:12,0:9:27.05:0,27,360	0/0:20,0:20:42.10:0,42,603	0/0:46,0:43:86.28:0,86,1201	0/0:30,0:27:57.18:0,57,856	0/0:18,0:16:39.11:0,39,562	0/0:41,0:40:99:0,105,1543	0/0:21,0:21:42.09:0,42,598	0/0:17,0:17:45.15:0,45,670	0/0:33,0:33:77.82:0,78,938	0/0:12,0:9:26.95:0,27,340
chr10	4128517	.	T	TCC	1189.98	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-7.533;DP=583;FS=16.365;HRun=0;HaplotypeScore=90.7795;InbreedingCoeff=0.9832;MQ=66.98;MQ0=26;MQRankSum=3.212;QD=33.06;ReadPosRankSum=-2.942;VQSLOD=3.7484;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:30:69.16:0,69,970	0/0:8,0:8:24.07:0,24,358	0/0:41,0:24:45.66:0,46,927	0/0:57,0:29:67.26:0,67,940	0/0:14,0:14:39.11:0,39,556	0/0:14,0:13:30.10:0,30,425	0/0:18,0:18:24.78:0,25,635	1/1:3,30:36:86.79:1285,87,0	0/0:16,0:16:42.12:0,42,623	0/0:15,0:14:34.83:0,35,502	0/0:12,0:12:30.04:0,30,389	0/0:29,0:28:60.84:0,61,820	0/0:8,0:8:21.07:0,21,304	0/0:13,0:12:30.10:0,30,454	0/0:15,0:13:26.85:0,27,333	0/0:16,0:16:30.03:0,30,418	0/0:26,0:26:66.17:0,66,915	0/0:17,0:17:26.15:0,26,288	0/0:13,0:10:23.98:0,24,267	0/0:20,0:20:42.12:0,42,586	0/0:24,0:23:42.12:0,42,617	0/0:14,0:13:30.08:0,30,423	0/0:12,0:11:30.05:0,30,398	0/0:41,0:41:77.19:0,77,1228	0/0:17,0:17:33.08:0,33,456	0/0:16,0:16:33.58:0,34,517	0/0:27,0:27:69.09:0,69,853	0/0:12,0:9:27.06:0,27,354
chr10	4129098	.	TTTGGG	T	3567.72	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=7.888;DP=510;FS=4.423;HRun=0;HaplotypeScore=101.2253;InbreedingCoeff=0.9686;MQ=69.89;MQ0=0;MQRankSum=-5.701;QD=34.64;ReadPosRankSum=10.938;VQSLOD=1.8181;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:47.92:0,48,568	0/0:10,0:10:27.56:0,28,435	0/0:26,0:17:44.70:0,45,730	0/0:14,0:11:21.05:0,21,394	0/0:24,0:24:69.14:0,69,1180	0/0:12,0:12:33.11:0,33,675	0/0:22,0:22:63.18:0,63,1288	1/1:20,0:20:18.15:581,18,0	0/0:12,0:12:36.12:0,36,769	0/0:20,0:20:54.26:0,54,1024	0/0:11,0:11:33.09:0,33,595	0/0:18,0:18:51.17:0,51,1085	0/0:19,0:19:57.18:0,57,1115	0/0:21,0:21:48.12:0,48,1150	0/0:27,0:27:27.06:0,27,482	0/0:20,0:20:60.21:0,60,1101	1/1:2,0:23:9.17:38,9,0	0/0:11,0:10:30.08:0,30,587	0/0:17,0:17:47.89:0,48,640	0/0:14,0:14:42.14:0,42,884	0/0:25,0:25:64.43:0,64,1139	0/0:18,0:18:54.07:0,54,886	0/0:15,0:15:28.65:0,29,431	0/0:18,0:18:54.19:0,54,1150	0/0:9,0:9:26.99:0,27,358	1/1:1,26:29:26.09:1408,26,0	1/1:1,25:26:60.20:1340,60,0	1/1:0,5:5:9.03:201,9,0
chr10	4129099	.	TTGGGG	T	2808.73	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=8.919;DP=503;FS=6.348;HRun=0;HaplotypeScore=101.9415;InbreedingCoeff=0.9755;MQ=70.70;MQ0=0;MQRankSum=-4.856;QD=36.01;ReadPosRankSum=10.686;VQSLOD=1.7366;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:46.84:0,47,347	0/0:9,0:10:21.88:0,22,277	0/0:27,0:18:43.43:0,43,565	0/0:13,0:10:20.82:0,21,356	0/0:24,0:24:69.08:0,69,894	0/0:12,0:12:33.05:0,33,513	0/0:23,0:23:65.68:0,66,1172	1/1:0,19:19:57.10:1019,57,0	0/0:12,0:12:36.02:0,36,587	0/0:20,0:20:59.98:0,60,831	0/0:11,0:11:33.07:0,33,472	0/0:18,0:18:54:0,54,899	0/0:19,0:19:54.12:0,54,901	0/0:21,0:21:61.65:0,62,913	0/0:25,0:25:18.02:0,18,417	0/0:20,0:20:60.08:0,60,799	0/0:22,0:23:17.75:0,18,93	0/0:9,0:8:26.95:0,27,503	0/0:17,0:17:48.06:0,48,556	0/0:14,0:14:42.11:0,42,791	0/0:24,0:24:63.51:0,64,862	0/0:18,0:18:54.05:0,54,643	0/0:14,0:14:25.64:0,26,347	0/0:18,0:18:54.09:0,54,899	0/0:9,0:9:25.25:0,25,324	1/1:29,0:29:49.35:907,49,0	1/1:25,0:25:60.20:907,60,0	1/1:5,0:5:9.03:132,9,0
chr10	4129100	.	T	TTG	608.95	PASS	AB=0.873;AC=10;AF=0.179;AN=56;BaseQRankSum=1.949;DP=501;FS=17.109;HRun=0;HaplotypeScore=110.7835;InbreedingCoeff=0.5429;MQ=70.52;MQ0=0;MQRankSum=0.168;QD=5.07;ReadPosRankSum=-2.840;VQSLOD=1.1313;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:24:41.69:305,42,0	0/0:10,0:10:17.18:0,17,119	0/1:24,0:16:9.12:9,0,160	0/1:14,0:11:23.75:24,0,40	0/0:24,0:24:32.14:0,32,192	0/0:11,0:11:14.26:0,14,107	0/0:24,0:24:46.43:0,46,357	0/0:19,0:19:49.84:0,50,242	0/0:12,0:12:26.73:0,27,210	0/0:17,0:17:27.93:0,28,212	0/0:8,0:13:25.62:0,26,189	0/0:17,0:18:22.64:0,23,161	0/0:18,0:18:30.28:0,30,184	0/0:21,0:22:41.83:0,42,263	0/1:3,20:26:10.84:88,0,11	0/0:20,0:20:24.59:0,25,158	0/0:23,0:23:13.54:0,14,62	1/1:9,0:8:23.08:200,23,0	0/0:13,0:17:34.78:0,35,198	0/0:14,0:14:29.36:0,29,207	0/0:24,0:24:39.32:0,39,258	0/0:18,0:18:15.70:0,16,76	0/1:9,0:14:1.79:2,0,28	0/0:18,0:18:35.61:0,36,302	1/1:8,0:8:18.21:138,18,0	0/0:29,0:29:66.22:0,66,282	0/0:25,0:25:55.64:0,56,248	0/0:5,0:5:8.39:0,8,38
chr10	4130560	.	T	TA	1188.30	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-6.881;DP=574;FS=0.584;HRun=9;HaplotypeScore=61.9080;InbreedingCoeff=0.9570;MQ=76.52;MQ0=0;MQRankSum=-0.419;QD=20.85;ReadPosRankSum=1.226;VQSLOD=4.1851;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:34:82.99:0,83,703	0/0:3,0:3:9:0,9,78	0/0:16,0:15:23.90:0,24,231	0/0:18,0:19:17.01:0,17,191	0/0:23,0:23:56.98:0,57,495	0/0:19,0:19:47.97:0,48,413	0/0:23,0:23:47.90:0,48,405	0/0:23,1:24:20.75:0,21,402	0/0:25,0:25:65.98:0,66,573	0/0:33,0:33:68.94:0,69,596	0/0:12,0:12:14.97:0,15,130	0/0:22,0:22:62.99:0,63,547	0/0:14,0:14:41.99:0,42,365	0/0:15,0:15:38.98:0,39,339	0/0:27,0:27:74.97:0,75,647	0/0:29,0:30:71:0,71,605	0/0:31,0:31:86.98:0,87,755	0/0:16,0:16:44.92:0,45,378	0/0:24,0:24:50.95:0,51,439	0/0:16,0:16:35.98:0,36,312	0/0:20,0:20:47.97:0,48,416	0/0:16,0:16:44.99:0,45,391	0/0:21,0:21:56.94:0,57,487	0/0:15,0:14:38.98:0,39,339	0/0:19,0:19:47.94:0,48,411	1/1:8,21:29:60.16:664,60,0	1/1:3,19:22:48.13:531,48,0	1/1:1,5:6:12.03:133,12,0
chr10	4130807	.	T	TACACACAC	271.39	PASS	AB=0.915;AC=15;AF=0.288;AN=52;BaseQRankSum=1.548;DP=499;FS=10.230;HRun=0;HaplotypeScore=124.6730;InbreedingCoeff=0.2161;MQ=54.64;MQ0=11;MQRankSum=-1.788;QD=1.21;ReadPosRankSum=-3.969;VQSLOD=0.5598;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:39,0:40:9.40:9,0,368	0/0:4,0:4:3.01:0,3,72	./.	./.	0/1:25,0:25:8.55:9,0,314	0/0:9,0:13:12.04:0,12,243	0/0:28,0:27:18.17:0,18,260	1/1:22,0:22:8.11:39,8,0	0/0:16,0:15:21.53:0,22,472	0/0:16,0:16:14.27:0,14,238	0/1:9,0:8:12.99:13,0,19	0/0:13,0:16:20.66:0,21,243	0/0:16,0:17:26.56:0,27,437	0/0:13,0:14:12.02:0,12,248	1/1:14,1:25:2.73:104,3,0	0/0:17,0:17:20.43:0,20,403	0/0:27,0:27:6.51:0,7,317	1/1:14,0:14:9.57:102,10,0	0/1:31,0:31:9.73:10,0,295	0/0:14,0:13:18.48:0,18,313	0/0:29,0:29:29.77:0,30,582	0/0:11,0:11:12.01:0,12,156	0/1:16,0:15:6.33:6,0,55	0/0:15,0:16:24.06:0,24,475	1/1:13,0:13:3.01:64,3,0	0/1:13,0:19:49.96:50,0,69	0/0:14,0:21:17.52:0,18,153	0/1:3,0:6:18.43:18,0,69
chr10	4132348	.	GGTGTGTGTGTGTGTGTGT	G	2139.30	PASS	AB=0.857;AC=9;AF=0.167;AN=54;BaseQRankSum=5.876;DP=652;FS=11.240;HRun=0;HaplotypeScore=264.0831;InbreedingCoeff=0.4089;MQ=54.22;MQ0=23;MQRankSum=-7.435;QD=11.08;ReadPosRankSum=-1.539;VQSLOD=0.8928;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:19,0:21:37.04:37,0,101	0/0:5,0:5:6.02:0,6,350	0/1:44,0:15:0:0,0,0	./.	0/0:19,0:18:12.04:0,12,844	0/0:29,0:29:33.55:0,34,1254	0/0:34,0:34:45.15:0,45,1891	0/1:28,0:28:58.84:168,0,59	0/0:23,0:26:42.10:0,42,1397	0/0:27,0:26:45.14:0,45,1964	0/0:16,0:16:18.53:0,19,973	0/0:21,0:21:39.12:0,39,1962	0/0:15,0:17:42.13:0,42,1265	0/0:12,0:12:12.51:0,13,514	1/1:9,18:27:23.56:1025,24,0	0/0:20,0:19:27.09:0,27,1620	0/1:15,0:24:3.59:4,0,86	0/1:16,7:22:16.25:365,0,16	0/0:15,0:15:16.78:0,17,367	0/0:23,0:24:35.79:0,36,1598	0/0:31,0:30:36.11:0,36,1417	0/0:15,0:22:15.05:0,15,557	0/0:24,0:25:21.03:0,21,1190	0/0:20,0:18:30.10:0,30,1465	1/1:9,10:21:15.05:680,15,0	0/0:24,0:26:33.11:0,33,825	0/0:13,0:15:14.36:0,14,254	0/0:12,0:15:17.25:0,17,293
chr10	4132977	.	AT	A	4123.65	PASS	AB=0.540;AC=11;AF=0.196;AN=56;BaseQRankSum=13.719;DP=631;FS=5.562;HRun=8;HaplotypeScore=59.7457;InbreedingCoeff=0.8838;MQ=73.08;MQ0=0;MQRankSum=-1.905;QD=23.70;ReadPosRankSum=-1.397;VQSLOD=3.9040;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,34:40:93.14:897,93,0	0/0:6,0:6:18.06:0,18,217	0/0:16,0:16:32.99:0,33,363	0/0:11,0:11:24.07:0,24,283	0/0:23,0:24:66.07:0,66,775	0/0:22,0:22:63.19:0,63,761	0/0:24,0:24:72.22:0,72,869	1/1:6,25:31:66.09:632,66,0	0/0:34,0:34:96.29:0,96,1160	0/0:28,0:28:81.24:0,81,968	0/0:13,0:13:39.12:0,39,471	0/0:26,0:26:75.22:0,75,890	0/0:17,0:17:42.13:0,42,507	0/0:26,0:26:75.23:0,75,904	0/0:27,0:27:72.22:0,72,870	0/0:25,0:25:75.23:0,75,906	1/1:0,12:12:30.05:290,30,0	0/0:23,0:23:63.16:0,63,742	0/0:11,0:11:24.07:0,24,290	0/0:22,0:22:60.18:0,60,725	0/0:32,0:32:78.24:0,78,942	0/0:22,0:22:54.17:0,54,652	0/0:11,0:11:24.07:0,24,290	0/0:22,0:22:63.19:0,63,760	0/0:15,0:15:42.13:0,42,507	0/1:5,29:34:45.81:741,0,46	1/1:0,33:33:96.15:927,96,0	1/1:1,23:24:66.11:637,66,0
chr10	4133380	.	GTC	G	660.15	PASS	AB=0.881;AC=6;AF=0.111;AN=54;BaseQRankSum=3.406;DP=237;FS=2.198;HRun=0;HaplotypeScore=44.5976;InbreedingCoeff=0.4216;MQ=83.19;MQ0=2;MQRankSum=-0.310;QD=13.75;ReadPosRankSum=0.232;VQSLOD=3.0547;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,14:21:13.23:527,13,0	./.	0/0:28,0:12:12.70:0,13,172	0/0:39,0:23:4.51:0,5,323	0/0:3,0:3:9.03:0,9,148	0/0:3,0:3:9.03:0,9,152	0/0:8,0:8:24.08:0,24,405	0/1:10,1:10:59.11:59,0,99	0/0:5,0:5:15.05:0,15,253	0/0:5,0:5:12.04:0,12,203	0/0:5,0:5:15.05:0,15,253	0/0:1,0:1:3.01:0,3,51	0/0:5,0:5:12.04:0,12,202	0/0:8,0:8:21.07:0,21,353	0/0:4,0:4:9.03:0,9,152	0/0:4,0:4:12.04:0,12,203	1/1:0,4:4:12.04:154,12,0	0/0:7,0:7:21.07:0,21,343	0/0:10,0:10:27.09:0,27,437	0/0:8,0:8:24.08:0,24,404	0/0:8,0:8:11.61:0,12,202	0/0:8,0:8:18.06:0,18,303	0/0:9,0:9:24.08:0,24,404	0/0:5,0:5:12.04:0,12,202	0/0:7,0:7:21.07:0,21,354	0/1:9,2:11:47.10:47,0,343	0/0:5,0:4:12.04:0,12,187	0/0:3,0:3:6.02:0,6,83
chr10	4133544	.	G	GTTTA	860.87	PASS	AC=2;AF=0.037;AN=54;BaseQRankSum=-3.291;DP=409;FS=6.241;HRun=0;HaplotypeScore=62.2241;InbreedingCoeff=0.7849;MQ=63.35;MQ0=0;MQRankSum=0.131;QD=30.75;ReadPosRankSum=1.417;VQSLOD=2.6761;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,19:28:39.13:955,39,0	0/0:2,0:2:6.02:0,6,99	0/0:10,0:7:5.99:0,6,71	./.	0/0:17,0:17:45.13:0,45,693	0/0:18,0:18:42.13:0,42,664	0/0:8,0:8:15.05:0,15,248	0/0:33,0:33:57.13:0,57,877	0/0:13,0:13:27.09:0,27,445	0/0:17,0:17:42.06:0,42,617	0/0:9,0:9:18.04:0,18,263	0/0:11,0:11:27.09:0,27,446	0/0:7,0:7:18.05:0,18,273	0/0:9,0:9:15.05:0,15,244	0/0:21,0:21:51.15:0,51,815	0/0:16,0:16:33.11:0,33,545	0/0:22,0:22:38.85:0,39,467	0/0:29,0:29:60.09:0,60,859	0/0:20,0:20:30.09:0,30,470	0/0:13,0:13:33.09:0,33,496	0/0:13,0:13:33.11:0,33,545	0/0:10,0:10:21.05:0,21,321	0/0:12,0:12:30.10:0,30,495	0/0:13,0:13:24.04:0,24,367	0/0:12,0:12:30.07:0,30,445	0/0:22,0:22:54.13:0,54,832	0/0:11,0:11:27.01:0,27,388	0/0:10,0:10:30.10:0,30,493
chr10	4133679	.	A	AACTCAGG	9350.86	PASS	AB=0.590;AC=11;AF=0.196;AN=56;BaseQRankSum=-3.474;DP=508;FS=22.154;HRun=0;HaplotypeScore=112.0381;InbreedingCoeff=0.8610;MQ=70.62;MQ0=0;MQRankSum=-12.901;QD=78.58;ReadPosRankSum=-1.339;VQSLOD=2.9443;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,21:35:66.16:2403,66,0	0/0:5,0:5:15.05:0,15,332	0/0:23,0:23:66.23:0,66,1710	0/0:18,0:17:51.17:0,51,1179	0/0:13,0:13:39.13:0,39,1028	0/0:24,0:23:72.21:0,72,1777	0/0:17,0:17:51.11:0,51,1190	1/1:11,0:30:78.27:2512,78,0	0/0:16,0:16:45.15:0,45,1123	0/0:12,0:12:33.11:0,33,865	0/0:14,0:14:39.09:0,39,959	0/0:23,0:23:63.20:0,63,1575	0/0:19,0:19:45.10:0,45,1003	0/0:13,0:13:39.12:0,39,942	0/0:20,0:20:57.20:0,57,1495	0/0:24,0:24:72.20:0,72,1684	1/1:2,10:15:24.55:913,25,0	0/0:26,0:26:78.22:0,78,1971	0/0:20,0:20:57.18:0,57,1413	0/0:7,0:7:15.04:0,15,333	0/0:32,0:32:96.31:0,96,2401	0/0:8,0:8:24.08:0,24,621	0/0:20,0:20:57.17:0,57,1268	0/0:23,0:23:66.23:0,66,1695	0/0:12,0:12:36.11:0,36,894	0/1:7,14:23:12.92:2243,0,13	1/1:5,7:12:33.09:1038,33,0	1/1:0,4:4:6.02:242,6,0
chr10	4133815	.	GA	G	4081.88	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=13.199;DP=592;FS=17.089;HRun=4;HaplotypeScore=70.5703;InbreedingCoeff=0.9397;MQ=73.15;MQ0=0;MQRankSum=-1.266;QD=32.66;ReadPosRankSum=-0.879;VQSLOD=1.8523;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,33:35:81.25:967,81,0	0/0:9,0:9:27.09:0,27,378	0/0:8,0:9:13.56:0,14,107	0/0:10,0:11:0.34:0,0,111	0/0:24,0:24:66.21:0,66,907	0/0:17,0:17:51.17:0,51,714	0/0:25,0:25:69.21:0,69,943	1/1:0,24:24:72.18:848,72,0	0/0:16,0:16:48.16:0,48,672	0/0:32,0:32:90.29:0,90,1239	0/0:16,0:16:42.14:0,42,588	0/0:28,0:28:78.24:0,78,1071	0/0:18,0:18:48.16:0,48,668	0/0:29,0:29:87.28:0,87,1201	0/0:33,0:33:78.26:0,78,1091	0/0:28,0:28:78.25:0,78,1077	1/1:0,25:25:75.23:900,75,0	0/0:22,0:22:57.14:0,57,755	0/0:22,0:22:60.20:0,60,840	0/0:16,0:16:42.13:0,42,572	0/0:42,0:42:99:0,117,1594	0/0:14,0:14:42.14:0,42,588	0/0:17,0:17:51.16:0,51,697	0/0:27,0:27:78.25:0,78,1071	0/0:12,0:12:36.12:0,36,504	1/1:0,18:18:51.16:612,51,0	1/1:1,17:18:51.16:611,51,0	1/1:0,5:5:12.04:144,12,0
chr10	4133852	.	A	AGTGT	3154.53	PASS	AB=0.964;AC=20;AF=0.385;AN=52;BaseQRankSum=1.749;DP=685;FS=3.396;HRun=0;HaplotypeScore=142.7025;InbreedingCoeff=0.7498;MQ=63.46;MQ0=7;MQRankSum=0.023;QD=12.09;ReadPosRankSum=-2.150;VQSLOD=2.9920;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:31:41.77:665,42,0	0/0:12,0:13:18.05:0,18,261	./.	./.	0/0:26,0:27:33.10:0,33,494	0/0:18,0:18:6:0,6,72	0/1:25,0:27:0.55:1,0,345	1/1:26,0:26:9.03:112,9,0	0/0:18,0:19:21.05:0,21,288	0/0:25,0:27:6.39:0,6,203	0/0:12,0:13:15.04:0,15,213	0/0:17,0:18:2.55:0,3,154	0/0:17,0:22:2.05:0,2,240	0/0:28,0:30:11.98:0,12,102	1/1:15,11:28:5.98:141,6,0	0/0:35,0:37:42.13:0,42,631	1/1:19,5:24:30.04:524,30,0	1/1:10,14:26:24.29:508,24,0	0/0:15,0:15:2.73:0,3,46	0/1:25,0:26:0.55:1,0,128	0/0:46,0:48:29.83:0,30,382	0/0:13,0:13:14.83:0,15,232	0/0:23,0:23:15.04:0,15,208	0/0:37,0:42:34.87:0,35,578	1/1:10,10:20:20.70:435,21,0	1/1:24,0:23:36.10:548,36,0	1/1:16,0:17:15.04:187,15,0	1/1:11,0:11:15.94:220,16,0
chr10	4135346	.	ATAGT	A	2069.35	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=8.792;DP=752;FS=11.961;HRun=0;HaplotypeScore=124.6542;InbreedingCoeff=0.9814;MQ=79.50;MQ0=0;MQRankSum=-3.197;QD=44.99;ReadPosRankSum=3.270;VQSLOD=3.9657;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,43:46:99:2164,114,0	0/0:8,0:8:24.05:0,24,569	0/0:21,0:21:56.54:0,57,1236	0/0:17,0:17:42.05:0,42,968	0/0:23,0:23:63.22:0,63,1642	0/0:24,0:23:63.22:0,63,1692	0/0:31,0:31:90.31:0,90,2409	0/0:27,0:27:75.23:0,75,1948	0/0:40,0:40:99:0,99,2673	0/0:31,0:31:84.29:0,84,2260	0/0:19,0:19:54.19:0,54,1439	0/0:29,0:29:81.28:0,81,2179	0/0:34,0:34:87.76:0,88,2260	0/0:19,0:19:54.19:0,54,1443	0/0:31,0:31:90.31:0,90,2373	0/0:20,0:20:60.19:0,60,1536	0/0:50,0:50:99:0,147,3870	0/0:27,0:27:78.27:0,78,2064	0/0:26,0:26:69.24:0,69,1850	0/0:11,0:10:27.09:0,27,707	0/0:46,0:46:99:0,132,3470	0/0:28,0:28:75.26:0,75,1995	0/0:12,0:12:36.11:0,36,887	0/0:38,0:38:99:0,111,2971	0/0:17,0:17:51.18:0,51,1377	0/0:40,0:40:99:0,114,2969	0/0:31,0:31:75.19:0,75,2010	0/0:6,0:6:15.05:0,15,405
chr10	4135910	.	C	CTG	1946.75	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-7.916;DP=624;FS=1.968;HRun=0;HaplotypeScore=71.1656;InbreedingCoeff=0.9546;MQ=62.76;MQ0=7;MQRankSum=1.730;QD=32.45;ReadPosRankSum=1.121;VQSLOD=5.7101;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,46:60:91.90:2042,92,0	0/0:5,0:5:12.04:0,12,150	0/0:37,0:25:53.90:0,54,641	0/0:26,0:23:41.36:0,41,550	0/0:15,0:15:36.11:0,36,450	0/0:16,0:16:42.13:0,42,525	0/0:22,0:22:32.19:0,32,638	0/0:32,0:31:60.17:0,60,729	0/0:24,0:24:69.21:0,69,852	0/0:27,0:27:54.17:0,54,676	0/0:14,0:15:38.96:0,39,464	0/0:21,0:22:60.02:0,60,727	0/0:20,0:20:45.14:0,45,563	0/0:16,0:16:42.13:0,42,525	0/0:20,0:20:54.17:0,54,676	0/0:16,0:17:47.98:0,48,577	0/0:31,0:31:77.61:0,78,946	0/0:29,0:28:75.16:0,75,903	0/0:16,0:14:39.11:0,39,464	0/0:15,0:15:36.12:0,36,450	0/0:31,0:31:72.22:0,72,888	0/0:24,0:24:60.19:0,60,751	0/0:15,0:15:39.12:0,39,488	0/0:28,0:28:72.23:0,72,901	0/0:15,0:15:33.11:0,33,413	0/0:17,0:17:42.13:0,42,526	0/0:24,0:24:66.17:0,66,808	0/0:5,0:5:15.05:0,15,188
chr10	4135971	.	GCAGGCACCGA	G	933.27	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.986;DP=515;FS=0.000;HRun=0;HaplotypeScore=148.0697;InbreedingCoeff=0.7599;MQ=65.94;MQ0=3;MQRankSum=-3.262;QD=51.85;ReadPosRankSum=-1.488;VQSLOD=3.2624;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,120,5779	0/0:5,0:5:15.05:0,15,744	0/0:10,0:7:8.31:0,8,600	0/0:7,0:4:11.25:0,11,444	0/0:10,0:10:24.07:0,24,1119	0/0:12,0:12:33.11:0,33,1700	0/0:37,0:37:96.33:0,96,4920	1/1:5,13:17:36.09:1028,36,0	0/0:24,0:24:69.24:0,69,3339	0/0:16,0:16:42.14:0,42,1931	0/0:13,0:13:18.06:0,18,874	0/0:20,0:20:51.65:0,52,2666	0/0:20,0:20:60.21:0,60,2996	0/0:20,0:20:57.20:0,57,2991	0/0:18,0:18:51.18:0,51,2487	0/0:14,0:14:42.14:0,42,1997	0/0:28,0:28:72.19:0,72,3512	0/0:21,0:21:57.11:0,57,2626	0/0:25,0:24:66.22:0,66,2831	0/0:8,0:8:21.07:0,21,1065	0/0:25,0:24:66.21:0,66,3106	0/0:12,0:12:27.08:0,27,1067	0/0:16,0:16:36.11:0,36,1621	0/0:28,0:28:75.26:0,75,3759	0/0:12,0:12:27.09:0,27,1349	0/0:26,0:26:78.27:0,78,3890	0/0:20,0:20:57.20:0,57,2809	0/0:2,0:2:3.01:0,3,158
chr10	4136102	.	AC	A	532.03	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.232;DP=518;FS=7.197;HRun=2;HaplotypeScore=52.1495;InbreedingCoeff=0.9876;MQ=76.73;MQ0=0;MQRankSum=-0.700;QD=29.56;ReadPosRankSum=-4.292;VQSLOD=1.4088;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:96.28:0,96,1374	0/0:7,0:7:21.07:0,21,314	0/0:25,0:24:69.66:0,70,955	0/0:24,0:24:50.66:0,51,825	0/0:9,0:9:27.09:0,27,402	0/0:13,0:13:36.12:0,36,539	0/0:23,0:23:69.19:0,69,966	1/1:0,18:18:51.13:627,51,0	0/0:21,0:21:63.21:0,63,938	0/0:19,0:19:57.19:0,57,854	0/0:13,0:13:39.13:0,39,581	0/0:21,0:21:60.19:0,60,868	0/0:19,0:19:54.17:0,54,785	0/0:17,0:17:48.16:0,48,710	0/0:9,0:9:24.08:0,24,358	0/0:12,0:12:36.11:0,36,519	0/0:25,0:25:72.23:0,72,1058	0/0:35,0:35:99:0,102,1515	0/0:16,0:16:45.13:0,45,653	0/0:7,0:7:21.06:0,21,295	0/0:28,0:28:78.26:0,78,1169	0/0:17,0:17:48.15:0,48,700	0/0:16,0:16:45.15:0,45,670	0/0:31,0:31:93.28:0,93,1350	0/0:9,0:9:27.08:0,27,384	0/0:15,0:15:39.13:0,39,584	0/0:17,0:17:51.12:0,51,686	0/0:18,0:18:54.18:0,54,808
chr10	4136732	.	GC	G	1165.39	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=9.156;DP=658;FS=3.067;HRun=1;HaplotypeScore=74.4506;InbreedingCoeff=0.9836;MQ=83.47;MQ0=0;MQRankSum=-2.262;QD=27.75;ReadPosRankSum=3.086;VQSLOD=3.6609;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,99,1451	0/0:7,0:7:21.03:0,21,301	0/0:15,0:15:41.50:0,41,589	0/0:29,0:29:83.96:0,84,1103	0/0:12,0:12:36.06:0,36,504	0/0:15,0:15:42.14:0,42,651	0/0:49,0:49:99:0,141,2096	0/0:19,0:19:48.16:0,48,735	0/0:31,0:31:90.24:0,90,1329	0/0:24,0:24:69.23:0,69,1057	0/0:6,0:6:18.06:0,18,281	0/0:29,0:29:87.25:0,87,1282	0/0:24,0:24:72.20:0,72,1093	0/0:30,0:30:87.25:0,87,1324	0/0:20,0:20:60.16:0,60,906	0/0:18,0:18:54.17:0,54,816	1/1:6,36:41:99:1260,108,0	0/0:36,1:37:73.28:0,73,1568	0/0:26,0:26:72.11:0,72,1091	0/0:10,0:10:24.08:0,24,369	0/0:40,0:40:99:0,114,1663	0/0:14,0:14:33.07:0,33,478	0/0:12,0:12:36.07:0,36,513	0/0:35,0:35:99:0,105,1586	0/0:20,0:20:54.17:0,54,815	0/0:33,0:33:93.27:0,93,1409	0/0:16,0:16:48.16:0,48,749	0/0:10,0:10:24.08:0,24,374
chr10	4136816	.	GCGTGCTGTCA	G	3108.07	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.420;DP=697;FS=25.151;HRun=0;HaplotypeScore=204.3493;InbreedingCoeff=0.9983;MQ=85.86;MQ0=0;MQRankSum=-9.435;QD=59.77;ReadPosRankSum=-0.951;VQSLOD=1.6484;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,12:19:39.13:1212,39,0	0/0:10,0:10:30.10:0,30,1599	0/0:22,0:21:60.21:0,60,3015	0/0:26,0:26:72.24:0,72,3137	0/0:18,0:18:54.18:0,54,2739	0/0:13,0:13:39.12:0,39,1808	0/0:38,0:38:99:0,105,5118	1/1:4,8:12:24.07:725,24,0	0/0:33,0:33:96.33:0,96,4916	0/0:36,0:36:99:0,108,5183	0/0:10,0:10:30.10:0,30,1527	0/0:31,0:31:90.28:0,90,4487	0/0:25,0:25:66.23:0,66,3416	0/0:31,0:31:81.05:0,81,4174	0/0:29,0:29:87.30:0,87,4430	0/0:27,0:27:81.28:0,81,4132	1/1:6,15:20:45.15:1314,45,0	0/0:35,0:35:99:0,102,4953	0/0:25,0:25:69.23:0,69,3144	0/0:13,0:13:39.13:0,39,1945	0/0:73,0:73:99:0,214,10569	0/0:17,0:17:51.18:0,51,2594	0/0:15,0:15:45.15:0,45,2398	0/0:35,0:35:99:0,99,5204	0/0:30,0:30:90.31:0,90,4621	0/0:32,0:32:96.33:0,96,4855	0/0:10,0:10:30.10:0,30,1518	0/0:11,0:10:27.08:0,27,1207
chr10	4136884	.	T	TCA	2666.85	PASS	AB=0.882;AC=12;AF=0.214;AN=56;BaseQRankSum=9.774;DP=873;FS=7.737;HRun=0;HaplotypeScore=148.0613;InbreedingCoeff=0.8335;MQ=57.74;MQ0=43;MQRankSum=-6.098;QD=15.42;ReadPosRankSum=-3.662;VQSLOD=2.0238;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,0:19:14.91:116,15,0	0/0:10,0:10:24.03:0,24,287	0/1:22,0:9:6.90:7,0,104	0/0:30,0:24:24.99:0,25,339	0/0:22,0:22:54.14:0,54,658	0/0:13,0:13:36.10:0,36,444	0/0:63,0:58:99:0,129,1546	1/1:36,1:34:64.76:426,65,0	0/0:45,0:41:99:0,104,1332	0/0:49,0:44:99:0,105,1307	0/0:18,0:17:45.13:0,45,559	0/0:35,0:31:86.85:0,87,1063	0/0:42,0:41:99:0,111,1347	0/0:27,0:26:69.22:0,69,867	0/0:24,0:22:37.98:0,38,559	0/0:26,0:26:69.16:0,69,839	0/1:20,0:28:3.73:275,0,4	0/0:33,0:32:69.30:0,69,929	0/0:28,0:26:56.88:0,57,666	0/0:20,0:19:41.40:0,41,504	0/0:102,0:91:99:0,161,2316	0/0:30,0:27:81.25:0,81,1016	0/0:25,0:25:63.20:0,63,801	0/0:34,0:33:75.33:0,75,1006	0/0:23,0:21:26.76:0,27,343	1/1:17,22:34:40.53:1146,41,0	1/1:3,10:12:29.55:484,30,0	1/1:8,5:11:24.08:391,24,0
chr10	4136890	.	ACACACT	A	3119.89	PASS	AB=0.905;AC=10;AF=0.179;AN=56;BaseQRankSum=11.789;DP=891;FS=5.836;HRun=0;HaplotypeScore=209.6783;InbreedingCoeff=0.7288;MQ=53.99;MQ0=49;MQRankSum=-5.268;QD=20.53;ReadPosRankSum=-1.760;VQSLOD=2.4030;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,4:22:9.93:395,10,0	0/0:10,0:10:27.09:0,27,570	0/0:21,0:8:3.37:0,3,113	0/0:26,0:20:26.02:0,26,416	0/0:22,0:22:60.18:0,60,1381	0/0:16,0:16:45.15:0,45,998	0/0:62,0:57:99:0,130,2340	1/1:8,31:32:78.03:1427,78,0	0/0:46,0:43:99:0,102,2439	0/0:47,0:41:99:0,111,2261	0/0:18,0:17:45.15:0,45,977	0/0:37,0:33:93.76:0,94,2151	0/0:41,0:39:99:0,114,2399	0/0:29,0:28:78.27:0,78,1669	0/0:23,0:20:46.06:0,46,790	0/0:33,0:32:87.21:0,87,1467	0/1:23,7:29:99:512,0,278	0/0:35,0:33:32.30:0,32,1150	0/0:34,0:29:60.07:0,60,1229	0/0:21,0:19:44.35:0,44,991	0/0:104,0:93:99:0,206,4600	0/0:32,0:29:87.30:0,87,1911	0/0:26,0:26:63.22:0,63,1656	0/0:36,0:35:91.52:0,92,2202	0/0:19,0:17:26.73:0,27,455	0/1:36,0:31:7.79:525,0,8	1/1:13,0:13:31.35:248,31,0	1/1:10,0:8:17.87:177,18,0
chr10	4136892	.	ACACT	A	1445.91	PASS	AB=0.995;AC=11;AF=0.196;AN=56;BaseQRankSum=11.976;DP=903;FS=0.000;HRun=0;HaplotypeScore=187.2257;InbreedingCoeff=0.4950;MQ=53.70;MQ0=50;MQRankSum=-5.921;QD=7.19;ReadPosRankSum=-3.044;VQSLOD=2.3405;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:20,3:22:10.31:205,10,0	0/0:10,0:10:27.09:0,27,611	0/1:21,0:8:2.35:2,0,97	0/1:25,0:19:21.64:22,0,386	0/0:21,0:21:60.18:0,60,1338	0/0:16,0:16:48.13:0,48,1015	0/0:63,0:57:99:0,132,2634	1/1:41,0:32:69.59:604,70,0	0/0:47,0:43:94.02:0,94,2407	0/0:48,0:42:96.41:0,96,2384	0/0:20,0:19:51.10:0,51,1057	0/0:40,0:36:99:0,103,2109	0/0:41,0:39:99:0,114,2504	0/0:31,0:30:84.25:0,84,1759	0/0:23,0:20:44.63:0,45,931	0/0:35,0:34:93.17:0,93,1603	0/1:30,0:29:99:208,0,341	0/0:35,0:33:53.07:0,53,1422	0/0:31,0:26:60.04:0,60,1123	0/0:20,0:17:34.29:0,34,970	0/0:106,0:96:99:0,188,4729	0/0:33,0:30:90.27:0,90,1960	0/0:25,0:25:63.20:0,63,1512	0/0:37,0:36:99:0,99,2061	0/0:19,0:17:27.09:0,27,581	0/1:35,1:31:75.35:341,0,75	1/1:14,1:14:13.78:147,14,0	0/1:10,0:8:2.90:75,0,3
chr10	4136964	.	T	TCA	5290.18	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-5.524;DP=1090;FS=2.692;HRun=0;HaplotypeScore=185.7851;InbreedingCoeff=0.9962;MQ=58.98;MQ0=11;MQRankSum=-3.145;QD=30.23;ReadPosRankSum=-1.301;VQSLOD=5.6948;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,27:30:17.12:331,17,0	0/0:12,0:12:27.09:0,27,359	0/0:26,0:18:26.74:0,27,534	0/0:30,0:19:19.26:0,19,295	0/0:33,0:33:84.24:0,84,1079	0/0:20,0:20:52.40:0,52,665	0/0:50,0:49:99:0,128,1668	1/1:6,24:23:60.19:982,60,0	0/0:46,0:42:99:0,102,1265	0/0:43,0:43:99:0,114,1473	0/0:17,0:17:45.12:0,45,568	0/0:43,0:41:99:0,111,1447	0/0:43,0:42:99:0,120,1565	0/0:58,0:58:99:0,166,2174	0/0:31,0:30:69.09:0,69,918	0/0:38,0:38:99:0,105,1367	1/1:16,20:33:52.27:958,52,0	0/0:44,0:43:99:0,117,1525	0/0:32,0:31:69.23:0,69,914	0/0:35,0:34:84.24:0,84,1116	0/0:153,0:147:99:0,356,4660	0/0:33,0:33:78.23:0,78,1006	0/0:33,0:33:80.26:0,80,1004	0/0:66,0:66:99:0,161,2047	0/0:26,0:26:45.13:0,45,598	1/1:6,34:39:62.36:1630,62,0	1/1:3,12:15:33.10:569,33,0	1/1:6,15:21:51.76:820,52,0
chr10	4136995	.	ACACACG	A	1142.71	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.366;DP=1205;FS=3.389;HRun=0;HaplotypeScore=284.7164;InbreedingCoeff=0.9712;MQ=58.34;MQ0=5;MQRankSum=-8.168;QD=20.05;ReadPosRankSum=-3.763;VQSLOD=2.3107;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:18,15:30:51.03:790,51,0	0/0:12,0:12:36.05:0,36,1000	0/0:46,0:31:55.54:0,56,1230	0/0:42,0:27:50.73:0,51,1071	0/0:35,0:35:84.18:0,84,2672	0/0:19,0:19:51.16:0,51,1649	0/0:63,0:62:99:0,159,4580	0/0:44,0:43:87.15:0,87,2354	0/0:53,0:53:99:0,123,3955	0/0:59,0:59:99:0,157,4918	0/0:20,0:20:48.16:0,48,1576	0/0:43,0:43:99:0,120,3627	0/0:55,0:55:99:0,138,4304	0/0:61,0:61:99:0,159,5170	0/0:39,0:40:84.19:0,84,3179	0/0:39,1:40:36.34:0,36,3078	1/1:21,3:22:9.38:468,9,0	0/0:44,0:44:99:0,126,3772	0/0:36,0:35:68.84:0,69,1901	0/0:34,0:34:75.24:0,75,2283	0/0:153,0:150:99:0,339,10351	0/0:37,0:37:93.28:0,93,2898	0/0:34,0:34:76.33:0,76,2817	0/0:63,0:63:99:0,159,5007	0/0:30,0:30:66.23:0,66,2205	0/0:47,0:47:74.94:0,75,3110	0/0:14,0:14:32.44:0,32,791	0/0:24,0:24:54.19:0,54,1749
chr10	4137007	.	GCA	G	48.91	PASS	AB=0.933;AC=5;AF=0.089;AN=56;BaseQRankSum=7.972;DP=1192;FS=3.603;HRun=0;HaplotypeScore=195.5410;InbreedingCoeff=0.7829;MQ=56.34;MQ0=4;MQRankSum=-6.312;QD=0.76;ReadPosRankSum=-2.397;VQSLOD=2.5668;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:28,4:29:12.53:52,13,0	0/0:14,0:14:33.11:0,33,552	0/0:41,0:25:45.35:0,45,693	0/0:40,0:26:49.81:0,50,740	0/0:32,0:32:90.17:0,90,1498	0/0:19,0:19:51.17:0,51,874	0/0:66,0:65:99:0,156,2582	0/0:44,0:44:99:0,102,1650	0/0:47,0:47:99:0,129,2202	0/0:60,0:60:99:0,166,2801	0/0:19,0:19:54.18:0,54,924	0/0:51,0:51:99:0,132,2244	0/0:56,0:56:99:0,150,2491	0/0:61,0:61:99:0,178,2935	0/0:43,0:43:99:0,109,1838	0/0:41,0:41:99:0,108,1853	1/1:12,6:16:18.60:109,19,0	0/0:49,0:49:99:0,114,2012	0/0:38,0:36:96.32:0,96,1577	0/0:31,0:31:81.22:0,81,1298	0/0:145,2:143:99:0,358,6003	0/0:37,0:37:99:0,99,1690	0/0:35,0:35:99:0,99,1680	0/0:65,0:65:99:0,175,2948	0/0:27,0:27:72.25:0,72,1228	0/0:42,0:42:97.36:0,97,1739	0/1:13,1:14:9.08:9,0,415	0/0:22,0:21:57.19:0,57,964
chr10	4137035	.	T	TCATA	1849.33	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=2.648;DP=1205;FS=4.853;HRun=0;HaplotypeScore=240.9472;InbreedingCoeff=0.7583;MQ=55.40;MQ0=3;MQRankSum=-6.719;QD=24.33;ReadPosRankSum=-3.213;VQSLOD=2.7096;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:17,16:30:9.91:763,10,0	0/0:16,0:16:48.14:0,48,848	0/0:44,0:17:46.55:0,47,637	0/0:44,0:21:44.94:0,45,735	0/0:31,0:31:87.24:0,87,1526	0/0:19,0:20:54.11:0,54,925	0/0:52,0:51:99:0,131,2292	1/1:22,6:24:69.09:1144,69,0	0/0:55,0:55:99:0,153,2766	0/0:74,0:74:99:0,205,3618	0/0:20,0:20:57.18:0,57,1042	0/0:57,0:57:99:0,153,2735	0/0:59,0:59:99:0,168,3042	0/0:61,0:61:99:0,174,3114	0/0:39,0:39:99:0,105,1893	0/0:45,0:45:99:0,129,2367	0/1:15,0:13:20.47:66,0,20	0/0:45,0:45:99:0,112,1860	0/0:35,0:33:61.34:0,61,1578	0/0:32,0:32:93.27:0,93,1707	0/0:168,0:165:99:0,417,7453	0/0:31,0:32:96.29:0,96,1734	0/0:36,0:36:96.22:0,96,1678	0/0:61,0:61:99:0,159,2793	0/0:27,0:27:75.24:0,75,1395	0/0:42,0:42:99:0,111,1871	0/0:13,0:13:36:0,36,605	0/0:19,0:19:54.14:0,54,925
chr10	4137036	.	C	CAT	1037.65	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=4.874;DP=1221;FS=1.336;HRun=0;HaplotypeScore=205.5498;InbreedingCoeff=0.9627;MQ=55.23;MQ0=5;MQRankSum=-6.802;QD=13.13;ReadPosRankSum=-2.930;VQSLOD=3.1787;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:33,1:31:22.10:291,22,0	0/0:16,0:16:48.14:0,48,710	0/0:47,0:17:45.20:0,45,574	0/0:44,0:21:59.84:0,60,713	0/0:30,0:30:87.25:0,87,1260	0/0:20,0:20:54.15:0,54,774	0/0:53,0:52:99:0,132,1879	1/1:29,1:25:57.94:628,58,0	0/0:56,0:56:99:0,154,2268	0/0:75,0:75:99:0,217,3081	0/0:21,0:21:60.18:0,60,875	0/0:56,0:56:99:0,157,2272	0/0:58,0:58:99:0,174,2502	0/0:63,0:63:99:0,174,2509	0/0:38,0:38:99:0,108,1562	0/0:46,0:46:99:0,129,1902	1/1:10,5:13:6.36:253,6,0	0/0:45,0:45:99:0,107,1477	0/0:36,0:34:94.10:0,94,1334	0/0:32,0:32:96.28:0,96,1419	0/0:175,0:170:99:0,430,6156	0/0:32,0:32:96.25:0,96,1402	0/0:36,0:36:99:0,99,1377	0/0:61,0:61:99:0,162,2288	0/0:26,0:26:78.24:0,78,1150	0/0:43,0:43:99:0,117,1578	0/0:13,0:13:34.65:0,35,484	0/0:19,0:19:54.14:0,54,759
chr10	4137063	.	T	TCA	4715.10	PASS	AB=0.640;AC=9;AF=0.161;AN=56;BaseQRankSum=3.889;DP=1266;FS=4.157;HRun=0;HaplotypeScore=198.8182;InbreedingCoeff=0.6068;MQ=55.10;MQ0=11;MQRankSum=-6.650;QD=25.77;ReadPosRankSum=-5.187;VQSLOD=3.7257;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:19,23:39:59.35:591,0,59	0/0:16,0:16:45.15:0,45,599	0/0:42,0:21:44.88:0,45,526	0/0:52,0:22:12.01:0,12,536	0/0:23,0:23:54.13:0,54,698	0/0:22,0:22:57.14:0,57,732	0/0:46,0:45:99:0,116,1487	1/1:8,33:33:69.15:1119,69,0	0/0:61,0:61:99:0,168,2164	0/0:74,0:74:99:0,190,2516	0/0:22,0:21:60.17:0,60,768	0/0:61,0:61:99:0,147,2034	0/0:78,0:78:99:0,223,2908	0/0:54,0:54:99:0,150,1997	0/0:42,0:42:99:0,108,1415	0/0:50,0:50:99:0,135,1752	0/1:13,11:21:14.50:369,0,14	0/0:43,0:42:98.65:0,99,1252	0/0:37,0:35:66.53:0,67,987	0/0:35,0:35:96.05:0,96,1250	0/0:157,1:153:99:0,349,4618	0/0:40,0:40:99:0,102,1326	0/0:30,0:30:75.25:0,75,999	0/0:63,0:63:99:0,162,2119	0/0:34,0:34:93.25:0,93,1178	0/1:14,31:44:15.42:1542,0,15	1/1:4,14:17:42.14:679,42,0	1/1:3,8:11:24.08:415,24,0
chr10	4137077	.	TCA	T	1690.08	PASS	AB=0.603;AC=4;AF=0.071;AN=56;BaseQRankSum=10.152;DP=1299;FS=1.789;HRun=0;HaplotypeScore=215.7791;InbreedingCoeff=0.4216;MQ=55.02;MQ0=17;MQRankSum=-8.047;QD=20.61;ReadPosRankSum=-1.510;VQSLOD=3.3589;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:51:77.04:0,77,1324	0/0:17,0:17:45.15:0,45,752	0/0:32,0:14:16.80:0,17,220	0/0:46,1:19:25.63:0,26,510	0/0:21,0:21:57.18:0,57,940	0/0:19,0:19:51.17:0,51,839	0/0:46,0:46:98.83:0,99,1619	0/0:69,0:56:99:0,144,2217	0/0:66,0:66:99:0,177,2883	0/0:69,0:67:99:0,196,3162	0/0:21,0:20:51.16:0,51,826	0/0:63,0:62:99:0,159,2676	0/0:82,0:82:99:0,229,3822	0/0:53,0:53:99:0,141,2313	0/0:45,0:45:99:0,108,1769	0/0:53,1:54:99:0,135,2227	0/0:26,1:23:4.36:0,4,619	0/0:45,0:44:68.21:0,68,1539	0/0:35,0:32:72.25:0,72,1213	0/0:36,0:36:99:0,105,1778	0/0:149,1:143:99:0,348,5739	0/0:39,0:39:99:0,99,1569	0/0:26,0:26:75.26:0,75,1269	0/0:62,0:62:99:0,169,2787	0/0:37,0:37:99:0,105,1731	0/1:16,28:43:99:894,0,231	0/1:7,15:21:56.90:446,0,57	1/1:5,11:15:36.12:466,36,0
chr10	4137132	.	A	AG	826.61	PASS	AB=0.780;AC=4;AF=0.071;AN=56;BaseQRankSum=10.632;DP=1432;FS=19.246;HRun=0;HaplotypeScore=207.1794;InbreedingCoeff=-0.0769;MQ=58.19;MQ0=9;MQRankSum=2.470;QD=3.72;ReadPosRankSum=6.223;VQSLOD=1.8484;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:64,25:78:99:302,0,1378	0/0:14,0:14:42.12:0,42,567	0/0:60,0:26:73.74:0,74,885	0/0:56,0:31:80.83:0,81,1059	0/0:27,0:27:78.23:0,78,1054	0/0:22,0:22:60.14:0,60,798	0/0:50,0:50:99:0,138,1745	0/0:62,2:47:99:0,135,1840	0/0:69,0:68:99:0,198,2681	0/0:71,0:71:99:0,205,2822	0/0:20,0:19:57.17:0,57,766	0/0:63,0:62:99:0,177,2402	0/0:76,0:75:99:0,226,3054	0/0:60,0:60:99:0,163,2264	0/0:62,0:61:99:0,177,2355	0/0:61,0:61:99:0,175,2413	0/1:25,16:36:99:225,0,510	0/0:35,2:37:53.92:0,54,1307	0/0:41,0:40:99:0,114,1593	0/0:39,0:39:99:0,112,1487	0/0:127,3:125:99:0,357,4811	0/0:39,0:39:99:0,117,1596	0/0:22,0:22:63.21:0,63,876	0/0:62,2:64:99:0,168,2261	0/0:43,0:43:99:0,117,1634	0/1:49,16:64:99:324,0,1713	0/1:21,6:26:84.69:85,0,660	0/0:18,1:18:31.04:0,31,690
chr10	4137168	.	TAC	T	243.03	PASS	AB=0.756;AC=1;AF=0.018;AN=56;BaseQRankSum=5.501;DP=1391;FS=2.497;HRun=0;HaplotypeScore=200.3757;InbreedingCoeff=-0.0186;MQ=55.31;MQ0=37;MQRankSum=-3.751;QD=7.84;ReadPosRankSum=-2.829;VQSLOD=3.2095;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:72,0:65:93.31:0,93,1578	0/0:12,0:12:33.10:0,33,540	0/0:47,1:10:30.03:0,30,462	0/0:57,2:19:17.06:0,17,441	0/0:28,0:28:75.24:0,75,1251	0/0:22,0:22:66.23:0,66,1114	0/0:51,0:50:99:0,114,1918	0/0:69,0:58:99:0,144,2381	0/0:67,0:65:99:0,174,2831	0/0:78,0:75:99:0,206,3354	0/0:24,0:24:69.22:0,69,1154	0/0:54,0:54:99:0,150,2553	0/0:60,0:59:99:0,153,2609	0/0:68,0:68:99:0,193,3209	0/0:66,0:66:99:0,168,2831	0/0:62,0:62:99:0,166,2741	0/1:20,10:29:99:317,0,222	0/0:40,0:40:99:0,105,1696	0/0:36,0:27:72.23:0,72,1189	0/0:29,0:29:72.25:0,72,1246	0/0:145,0:141:99:0,358,5981	0/0:35,0:35:96.30:0,96,1601	0/0:22,0:22:63.21:0,63,1067	0/0:65,0:65:99:0,172,2873	0/0:38,0:38:91.18:0,91,1528	0/0:53,0:52:99:0,144,2406	0/0:27,0:27:66.15:0,66,1060	0/0:30,0:29:63.22:0,63,1079
chr10	4137238	.	C	CACAT	7638.37	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-8.163;DP=1328;FS=3.701;HRun=0;HaplotypeScore=214.9401;InbreedingCoeff=0.9991;MQ=55.32;MQ0=11;MQRankSum=0.825;QD=34.41;ReadPosRankSum=-4.930;VQSLOD=3.9290;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:26,27:46:65.37:1505,65,0	0/0:13,0:13:39.12:0,39,700	0/0:51,0:19:49.09:0,49,893	0/0:52,0:21:51.38:0,51,825	0/0:28,0:28:84.26:0,84,1559	0/0:23,1:24:63.22:0,63,1184	0/0:42,0:41:99:0,111,2062	1/1:10,33:34:84.21:1772,84,0	0/0:79,1:79:99:0,222,4110	0/0:69,0:68:99:0,188,3545	0/0:29,0:29:87.28:0,87,1608	0/0:62,0:62:99:0,172,3150	0/0:70,0:70:99:0,202,3666	0/0:59,0:59:99:0,172,3062	0/0:69,0:68:99:0,190,3455	0/0:50,0:49:99:0,151,2819	1/1:9,11:17:20.88:489,21,0	0/0:40,0:40:50.34:0,50,2071	0/0:40,0:35:93.29:0,93,1678	0/0:26,0:26:72.72:0,73,1359	0/0:113,2:112:99:0,277,4957	0/0:41,0:41:99:0,120,2262	0/0:35,0:35:96.33:0,96,1811	0/0:77,0:77:99:0,196,3665	0/0:33,0:33:90.31:0,90,1680	1/1:3,28:31:84.21:1874,84,0	1/1:4,21:24:33.11:890,33,0	1/1:4,34:39:42.14:1109,42,0
chr10	4137408	.	CACAT	C	2096.08	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=9.710;DP=1308;FS=3.544;HRun=0;HaplotypeScore=226.0772;InbreedingCoeff=0.9998;MQ=56.31;MQ0=16;MQRankSum=-8.878;QD=41.10;ReadPosRankSum=-4.704;VQSLOD=2.5874;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:62,0:62:99:0,150,3669	0/0:13,0:13:36.10:0,36,776	0/0:50,0:25:72.18:0,72,1635	0/0:45,0:23:51.02:0,51,1154	0/0:30,0:30:84.27:0,84,2118	0/0:36,0:36:99:0,102,2632	0/0:43,0:43:99:0,114,3075	1/1:4,47:45:99:2191,123,0	0/0:64,0:64:99:0,180,4515	0/0:64,0:63:99:0,183,4654	0/0:34,0:33:93.31:0,93,2336	0/0:66,0:66:99:0,190,4678	0/0:61,0:61:99:0,178,4492	0/0:49,0:49:99:0,144,3697	0/0:64,0:64:99:0,182,4562	0/0:49,0:49:99:0,138,3587	0/0:46,0:45:90.52:0,91,2998	0/0:37,1:37:61.86:0,62,2631	0/0:24,0:16:45.14:0,45,1094	0/0:47,0:46:99:0,132,3392	0/0:96,0:95:99:0,238,6234	0/0:40,0:40:99:0,108,2863	0/0:28,0:28:84.29:0,84,2135	0/0:62,0:62:99:0,162,4266	0/0:35,0:35:90.11:0,90,2333	0/0:53,0:52:99:0,144,3752	0/0:37,0:37:99:0,105,2686	0/0:20,0:19:51.17:0,51,1266
chr10	4137410	.	CAT	C	564.07	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=11.244;DP=1310;FS=3.541;HRun=0;HaplotypeScore=181.1516;InbreedingCoeff=0.9999;MQ=56.28;MQ0=19;MQRankSum=-9.000;QD=11.06;ReadPosRankSum=-4.805;VQSLOD=2.7389;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:64,0:64:99:0,164,2771	0/0:13,0:13:36.08:0,36,585	0/0:49,0:25:72.07:0,72,1174	0/0:46,0:23:51:0,51,879	0/0:31,0:31:90.25:0,90,1613	0/0:35,0:35:99:0,102,1937	0/0:46,0:46:99:0,123,2273	1/1:51,0:44:99:659,115,0	0/0:63,0:63:99:0,183,3333	0/0:65,0:63:99:0,186,3443	0/0:33,0:32:93.28:0,93,1684	0/0:68,0:68:99:0,198,3506	0/0:62,0:62:99:0,184,3377	0/0:49,0:49:99:0,147,2783	0/0:66,1:67:99:0,182,3396	0/0:48,0:48:99:0,141,2655	0/0:44,1:45:96.87:0,97,2249	0/0:38,0:37:96.70:0,97,1964	0/0:25,0:17:48.11:0,48,834	0/0:46,0:45:99:0,132,2519	0/0:94,1:94:99:0,240,4495	0/0:38,0:38:99:0,111,2110	0/0:28,0:28:84.27:0,84,1558	0/0:62,1:63:99:0,165,3078	0/0:33,0:33:90.29:0,90,1716	0/0:53,0:52:99:0,147,2743	0/0:37,0:37:99:0,105,1968	0/0:19,0:18:51.16:0,51,920
chr10	4137495	.	TCA	T	696.06	PASS	AB=0.976;AC=3;AF=0.054;AN=56;BaseQRankSum=3.106;DP=1239;FS=7.603;HRun=0;HaplotypeScore=173.7746;InbreedingCoeff=0.7658;MQ=56.84;MQ0=9;MQRankSum=-3.672;QD=8.09;ReadPosRankSum=-4.233;VQSLOD=1.8149;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:69,0:69:99:0,156,2453	0/0:12,0:12:33.11:0,33,558	0/0:39,0:16:35.95:0,36,487	0/1:40,1:16:1.30:1,0,260	0/0:36,0:36:99:0,99,1580	0/0:24,0:24:54.18:0,54,900	0/0:33,0:33:89.77:0,90,1418	1/1:29,16:41:64.94:791,65,0	0/0:58,0:58:99:0,150,2396	0/0:54,0:54:99:0,147,2373	0/0:30,0:30:75.21:0,75,1199	0/0:57,0:57:99:0,150,2409	0/0:50,0:50:99:0,132,2076	0/0:47,0:47:99:0,120,1931	0/0:60,1:61:99:0,124,2614	0/0:56,0:55:99:0,147,2412	0/0:45,0:44:99:0,117,1884	0/0:27,0:28:68.91:0,69,1027	0/0:32,0:21:48.16:0,48,777	0/0:45,0:45:99:0,108,1717	0/0:82,0:81:99:0,194,3143	0/0:34,0:34:84.27:0,84,1374	0/0:36,0:36:90.31:0,90,1519	0/0:70,0:70:99:0,177,2913	0/0:35,0:35:96.29:0,96,1524	0/0:57,0:57:99:0,148,1278	0/0:27,0:27:43.81:0,44,281	0/0:33,0:32:52.88:0,53,286
chr10	4137507	.	TCA	T	3762.47	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=13.384;DP=1190;FS=7.469;HRun=0;HaplotypeScore=155.4341;InbreedingCoeff=0.9957;MQ=58.23;MQ0=9;MQRankSum=-3.102;QD=24.75;ReadPosRankSum=-2.346;VQSLOD=3.9318;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:63,0:64:99:0,129,2011	0/0:11,0:11:33.11:0,33,552	0/0:38,0:12:27.05:0,27,398	0/0:44,0:21:18.78:0,19,498	0/0:37,1:38:64.12:0,64,1529	0/0:23,0:23:54.17:0,54,873	0/0:34,1:35:52.13:0,52,1380	1/1:13,26:35:69.04:809,69,0	0/0:52,0:52:99:0,141,2255	0/0:61,0:61:99:0,153,2426	0/0:29,0:29:78.25:0,78,1261	0/0:55,0:55:99:0,153,2415	0/0:46,0:46:82.32:0,82,1746	0/0:44,0:44:99:0,111,1833	0/0:59,0:59:99:0,156,2516	0/0:53,0:52:99:0,135,2151	0/0:44,0:43:97.88:0,98,1592	0/0:24,1:25:18.91:0,19,776	0/0:22,0:16:30.10:0,30,502	0/0:45,0:45:76.34:0,76,1723	0/0:82,0:79:99:0,143,2776	0/0:30,0:31:84.29:0,84,1372	0/0:38,0:38:96.31:0,96,1550	0/0:66,0:66:99:0,171,2805	0/0:33,0:33:90.31:0,90,1500	1/1:11,44:55:99:1651,132,0	1/1:2,20:22:39.12:496,39,0	1/1:5,30:35:64.76:806,65,0
chr10	4137969	.	AT	A	5401.91	PASS	AB=0.909;AC=13;AF=0.232;AN=56;BaseQRankSum=14.185;DP=590;FS=0.745;HRun=5;HaplotypeScore=59.1375;InbreedingCoeff=0.9188;MQ=78.04;MQ0=0;MQRankSum=-1.690;QD=29.36;ReadPosRankSum=0.205;VQSLOD=5.1272;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,42:42:99:1327,117,0	0/0:8,0:8:24.08:0,24,328	0/0:16,0:17:24.75:0,25,525	0/1:9,1:10:5.66:6,0,264	0/0:31,0:31:87.29:0,87,1190	0/0:14,0:14:42.14:0,42,575	0/0:17,0:17:48.13:0,48,637	1/1:1,27:28:78.16:850,78,0	0/0:19,0:19:57.18:0,57,763	0/0:25,0:25:69.22:0,69,920	0/0:21,0:21:57.19:0,57,779	0/0:14,0:14:42.14:0,42,575	0/0:25,0:25:75.23:0,75,1009	0/0:20,0:20:57.19:0,57,779	0/0:13,0:13:33.10:0,33,437	0/0:13,0:13:39.13:0,39,533	1/1:1,22:23:60.17:681,60,0	0/0:18,0:18:54.18:0,54,738	0/0:22,0:22:66.22:0,66,901	0/0:23,0:23:63.16:0,63,809	0/0:21,0:21:63.21:0,63,861	0/0:8,0:8:21.07:0,21,287	0/0:23,0:23:69.22:0,69,926	0/0:20,0:20:60.14:0,60,783	0/0:34,0:34:96.30:0,96,1283	1/1:1,33:34:96.25:1076,96,0	1/1:1,30:31:84.24:953,84,0	1/1:0,16:16:45.13:510,45,0
chr10	4138948	.	TAA	T	809.03	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=7.700;DP=443;FS=3.190;HRun=15;HaplotypeScore=65.9409;InbreedingCoeff=0.8117;MQ=54.28;MQ0=19;MQRankSum=-0.750;QD=14.71;ReadPosRankSum=2.822;VQSLOD=2.9971;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:32:62.52:0,63,708	0/0:10,0:10:20.65:0,21,242	0/0:12,0:2:5.95:0,6,49	0/0:10,0:3:0:0,0,0	0/0:17,0:21:29.01:0,29,281	0/0:14,0:16:33.04:0,33,368	0/0:9,0:8:18.06:0,18,240	0/0:21,0:26:49.38:0,49,511	0/0:4,0:9:12.48:0,12,43	0/0:23,0:24:63.61:0,64,766	0/0:20,0:19:42.13:0,42,552	0/0:7,1:8:15.02:0,15,170	0/0:4,0:4:3.01:0,3,40	0/0:8,0:8:12.01:0,12,131	1/1:3,9:12:17.78:158,18,0	0/0:14,0:15:35.54:0,36,401	0/0:6,0:20:27.36:0,27,95	1/1:1,12:12:30.88:266,31,0	0/0:15,0:14:20.51:0,21,219	0/0:16,0:15:27:0,27,312	0/0:15,0:16:34.14:0,34,428	0/0:5,0:5:9.03:0,9,122	0/0:11,0:11:12.04:0,12,161	0/0:9,0:8:15.05:0,15,204	1/1:5,25:29:59.79:524,60,0	0/0:19,0:19:31.81:0,32,399	0/0:17,0:17:41.51:0,42,413	0/0:23,0:20:36.10:0,36,397
chr10	4139309	.	CAA	C	2110.48	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=8.369;DP=768;FS=0.532;HRun=3;HaplotypeScore=95.1960;InbreedingCoeff=0.9967;MQ=70.76;MQ0=0;MQRankSum=-1.634;QD=40.59;ReadPosRankSum=1.887;VQSLOD=3.1296;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,52:52:99:2205,144,0	0/0:9,0:9:24.08:0,24,464	0/0:11,0:11:27.88:0,28,448	0/0:22,0:21:31.38:0,31,664	0/0:32,0:32:93.28:0,93,1742	0/0:29,0:29:84.29:0,84,1623	0/0:25,0:25:75.26:0,75,1423	0/0:29,0:28:78.26:0,78,1471	0/0:30,0:30:87.30:0,87,1674	0/0:31,0:31:93.32:0,93,1792	0/0:22,0:22:66.23:0,66,1275	0/0:37,0:37:99:0,111,2131	0/0:26,0:26:75.26:0,75,1438	0/0:29,0:29:87.30:0,87,1674	0/0:30,0:30:84.29:0,84,1623	0/0:36,0:36:99:0,108,2080	0/0:44,0:44:99:0,132,2543	0/0:24,0:24:72.25:0,72,1371	0/0:15,0:15:45.13:0,45,831	0/0:21,0:21:63.21:0,63,1168	0/0:40,0:40:99:0,120,2262	0/0:18,0:18:51.17:0,51,968	0/0:19,0:19:54.16:0,54,993	0/0:34,0:34:99:0,102,1955	0/0:24,0:24:69.21:0,69,1312	0/0:32,0:32:96.33:0,96,1854	0/0:27,0:27:81.27:0,81,1531	0/0:20,0:20:60.21:0,60,1159
chr10	4139874	.	TTG	T	1340.72	PASS	AB=0.882;AC=27;AF=0.519;AN=52;BaseQRankSum=0.837;DP=607;FS=0.000;HRun=0;HaplotypeScore=86.9151;InbreedingCoeff=0.4294;MQ=64.58;MQ0=28;MQRankSum=2.134;QD=4.31;ReadPosRankSum=1.224;VQSLOD=2.3450;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:27:13.34:17,0,13	1/1:8,3:11:8.76:77,9,0	./.	./.	1/1:15,7:23:5.29:106,5,0	1/1:5,7:12:3.01:32,3,0	0/1:8,5:13:34.88:56,0,35	0/0:23,0:23:3.43:0,3,19	1/1:20,4:25:23.86:224,24,0	0/0:25,0:24:17.73:0,18,184	0/0:15,0:15:11.53:0,12,142	0/1:26,0:27:44.51:45,0,115	1/1:12,5:17:9.02:97,9,0	1/1:12,3:15:6.01:65,6,0	0/0:17,0:14:2.97:0,3,21	0/1:19,0:19:13.76:14,0,121	0/0:28,0:28:26.60:0,27,286	0/0:23,0:20:3.97:0,4,36	1/1:20,0:20:8.96:76,9,0	1/1:6,6:12:11.99:116,12,0	1/1:30,0:30:11.98:103,12,0	0/1:8,5:13:36.37:83,0,36	1/1:9,2:12:12.02:122,12,0	1/1:15,14:29:27.07:291,27,0	0/0:21,0:18:8.42:0,8,50	0/0:25,0:30:13:0,13,181	0/0:17,0:17:14.98:0,15,133	0/0:17,0:17:23.83:0,24,222
chr10	4140075	.	TA	T	833.68	PASS	AB=0.900;AC=7;AF=0.125;AN=56;BaseQRankSum=3.077;DP=443;FS=1.790;HRun=13;HaplotypeScore=53.5145;InbreedingCoeff=0.7345;MQ=74.73;MQ0=2;MQRankSum=-0.138;QD=11.74;ReadPosRankSum=2.693;VQSLOD=3.4790;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,3:27:27.02:0,27,402	0/0:5,0:5:15.02:0,15,141	0/0:27,0:17:12.76:0,13,105	0/0:19,0:15:4.35:0,4,111	0/0:19,1:20:25.65:0,26,391	0/0:12,1:13:8.11:0,8,233	0/1:7,1:9:1.13:1,0,118	0/0:20,0:38:66.87:0,67,345	0/0:12,2:14:7.91:0,8,240	0/0:29,0:28:49.15:0,49,498	0/0:13,0:15:38.70:0,39,339	0/0:8,0:8:18.02:0,18,170	0/0:10,0:11:23.87:0,24,218	0/0:11,0:12:35.88:0,36,329	1/1:1,11:12:32.81:241,33,0	0/0:11,0:11:6.57:0,7,213	0/0:16,1:17:41.99:0,42,390	1/1:7,15:23:39.64:274,40,0	0/0:14,0:15:26.88:0,27,248	0/0:16,1:17:22.98:0,23,363	0/0:7,0:7:14.98:0,15,128	0/0:3,1:4:5.96:0,6,49	0/0:15,0:15:33:0,33,307	0/0:3,0:3:9.01:0,9,88	1/1:4,23:27:62.63:459,63,0	0/0:23,1:25:40.96:0,41,526	0/0:13,0:14:26.88:0,27,246	0/0:6,0:6:15.01:0,15,140
chr10	4141782	.	GGT	G	244.87	PASS	AB=0.960;AC=11;AF=0.229;AN=48;BaseQRankSum=1.866;DP=598;FS=5.768;HRun=0;HaplotypeScore=85.2181;InbreedingCoeff=-0.0411;MQ=59.16;MQ0=13;MQRankSum=2.278;QD=1.06;ReadPosRankSum=1.144;VQSLOD=1.2371;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:32,0:35:2.84:14,3,0	./.	./.	./.	0/0:18,0:18:9.03:0,9,124	0/0:12,0:11:6.02:0,6,71	0/0:15,0:14:3.01:0,3,44	0/0:34,0:34:5.94:0,6,41	1/1:12,5:17:12.03:129,12,0	0/0:26,0:26:3.01:0,3,40	0/0:9,0:9:5.99:0,6,61	0/1:17,1:18:32.66:33,0,118	0/1:16,1:17:26.11:26,0,38	0/1:21,1:22:20.11:20,0,116	0/0:22,0:21:11.96:0,12,92	0/1:18,1:19:35.14:55,0,35	0/0:32,0:32:27.13:0,27,248	0/0:19,0:19:12:0,12,135	0/0:16,0:16:6.01:0,6,68	0/0:14,0:14:3.01:0,3,44	0/1:40,0:37:47.53:48,0,98	0/0:16,0:16:9.03:0,9,122	0/1:25,0:24:42.80:43,0,69	0/1:33,2:35:13.16:13,0,346	./.	0/0:33,0:33:25.92:0,26,215	0/0:15,0:15:10.16:0,10,71	0/0:8,0:8:2.99:0,3,23
chr10	4142024	.	C	CCACTGTTGT	4793.35	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-4.135;DP=743;FS=7.378;HRun=0;HaplotypeScore=194.7913;InbreedingCoeff=0.9880;MQ=79.29;MQ0=1;MQRankSum=-10.263;QD=97.82;ReadPosRankSum=0.143;VQSLOD=4.4147;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,34:49:99:4793,114,0	0/0:8,0:8:18.06:0,18,528	0/0:30,0:30:73.76:0,74,1763	0/0:28,0:25:60.16:0,60,1565	0/0:37,0:37:96.33:0,96,2666	0/0:21,0:21:51.15:0,51,1332	0/0:26,0:26:72.25:0,72,2092	0/0:30,0:30:75.25:0,75,2048	0/0:26,0:26:72.25:0,72,1988	0/0:33,0:33:93.31:0,93,2486	0/0:13,0:13:36.12:0,36,1032	0/0:33,0:33:87.29:0,87,2357	0/0:22,0:22:63.22:0,63,1833	0/0:28,0:28:84.29:0,84,2379	0/0:21,0:21:60.21:0,60,1704	0/0:28,0:28:75.21:0,75,1928	0/0:34,0:34:90.31:0,90,2552	0/0:22,0:22:48.16:0,48,1348	0/0:20,0:20:51.15:0,51,1365	0/0:26,0:26:66.23:0,66,1826	0/0:42,0:42:99:0,120,3503	0/0:23,0:23:57.20:0,57,1539	0/0:28,0:28:75.26:0,75,2153	0/0:35,0:35:99:0,102,2916	0/0:23,0:23:66.23:0,66,1860	0/0:27,0:27:72.25:0,72,2087	0/0:22,0:22:63.21:0,63,1755	0/0:7,0:7:21.07:0,21,615
chr10	4144462	.	C	CCCACTAGA	1592.03	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.857;DP=704;FS=6.492;HRun=0;HaplotypeScore=178.0678;InbreedingCoeff=0.9978;MQ=78.66;MQ0=0;MQRankSum=-6.473;QD=79.60;ReadPosRankSum=-0.260;VQSLOD=3.5880;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:58:99:0,163,4592	0/0:12,0:12:36.12:0,36,1001	0/0:26,0:25:63.20:0,63,1651	0/0:22,0:22:59.47:0,59,1454	0/0:22,0:22:63.22:0,63,1817	0/0:26,0:26:75.24:0,75,2069	0/0:39,0:39:99:0,114,3304	0/0:24,0:24:60.21:0,60,1716	0/0:26,0:26:75.23:0,75,1993	0/0:29,0:29:81.27:0,81,2291	0/0:14,0:14:42.13:0,42,1113	0/0:23,0:23:69.23:0,69,1912	0/0:22,0:22:66.18:0,66,1698	0/0:33,0:33:99:0,99,2765	0/0:26,0:26:75.26:0,75,2132	0/0:22,0:22:66.23:0,66,1867	1/1:10,10:20:46.24:1687,46,0	0/0:28,0:28:84.25:0,84,2241	0/0:17,0:17:48.16:0,48,1298	0/0:17,0:17:51.18:0,51,1468	0/0:44,0:44:99:0,132,3865	0/0:22,0:22:63.03:0,63,1704	0/0:17,0:17:51.18:0,51,1454	0/0:27,0:27:78.25:0,78,2166	0/0:20,0:20:57.20:0,57,1580	0/0:29,0:29:62.28:0,62,2151	0/0:31,0:31:84.26:0,84,2302	0/0:8,0:8:24.08:0,24,703
chr10	4144466	.	A	AT	250.17	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.536;DP=710;FS=1.123;HRun=0;HaplotypeScore=77.9721;InbreedingCoeff=0.9490;MQ=78.57;MQ0=0;MQRankSum=-4.707;QD=13.90;ReadPosRankSum=1.470;VQSLOD=4.5130;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:57:99:0,169,2322	0/0:12,0:12:33.11:0,33,461	0/0:21,0:21:63.21:0,63,866	0/0:23,0:23:66.03:0,66,814	0/0:23,0:23:66.19:0,66,888	0/0:25,0:25:69.23:0,69,964	0/0:40,0:40:99:0,117,1613	0/0:26,0:26:75.23:0,75,1003	0/0:26,0:26:78.24:0,78,1053	0/0:28,0:28:81.24:0,81,1109	0/0:14,0:14:42.14:0,42,585	0/0:24,0:24:66.22:0,66,922	0/0:23,0:23:66.17:0,66,879	0/0:36,0:36:99:0,108,1405	0/0:28,0:28:81.21:0,81,1076	0/0:21,0:21:63.21:0,63,881	1/1:7,11:18:9.92:334,10,0	0/0:30,0:30:84.26:0,84,1154	0/0:16,0:16:48.15:0,48,647	0/0:18,0:18:51.17:0,51,710	0/0:48,0:48:99:0,144,1942	0/0:20,0:20:60.18:0,60,821	0/0:18,0:18:51.17:0,51,710	0/0:26,0:26:78.24:0,78,1071	0/0:19,0:19:57.17:0,57,775	0/0:29,0:29:84.27:0,84,1141	0/0:31,0:31:90.29:0,90,1239	0/0:10,0:10:30.06:0,30,381
chr10	4144629	.	T	TACACACACACACAC	1825.11	PASS	AB=0.920;AC=11;AF=0.196;AN=56;BaseQRankSum=5.300;DP=646;FS=0.000;HRun=0;HaplotypeScore=237.0378;InbreedingCoeff=0.4142;MQ=71.25;MQ0=2;MQRankSum=-5.022;QD=10.99;ReadPosRankSum=-2.763;VQSLOD=1.7425;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:11,0:33:26.28:68,0,26	0/0:9,0:9:27.07:0,27,685	0/0:28,0:19:53.90:0,54,674	0/0:30,0:21:59.50:0,60,656	0/0:23,0:23:57.18:0,57,1649	0/0:23,0:23:54.09:0,54,1181	0/0:30,0:30:58.33:0,58,1714	0/1:10,0:10:99:127,0,229	0/0:25,0:25:72.19:0,72,2276	0/0:13,0:14:42.13:0,42,1044	0/0:17,0:17:43.68:0,44,976	0/0:25,0:25:72.10:0,72,2263	0/0:23,0:23:57.65:0,58,1671	0/0:22,0:22:59.97:0,60,1674	1/1:4,16:23:12.04:805,12,0	0/0:25,0:25:75.22:0,75,2421	0/1:22,0:22:99:262,0,508	1/1:15,0:15:16.33:155,16,0	0/0:18,0:18:47.83:0,48,808	0/0:23,0:23:63.15:0,63,1422	0/0:54,0:54:99:0,141,3106	0/0:26,0:26:69.20:0,69,2025	0/0:19,0:19:39.22:0,39,1006	0/0:37,0:37:81.32:0,81,2880	1/1:14,0:14:12.95:226,13,0	0/1:19,0:19:99:229,0,432	0/1:27,0:27:99:115,0,552	0/0:8,0:8:22.80:0,23,195
chr10	4145407	.	CTACA	C	4795.92	PASS	AB=0.812;AC=16;AF=0.320;AN=50;BaseQRankSum=13.329;DP=764;FS=4.563;HRun=0;HaplotypeScore=119.1992;InbreedingCoeff=0.8084;MQ=61.70;MQ0=8;MQRankSum=0.744;QD=17.57;ReadPosRankSum=1.726;VQSLOD=4.0949;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:18,20:38:12.65:571,0,13	0/0:10,0:10:15.05:0,15,327	./.	./.	0/0:31,0:31:51.18:0,51,1153	0/0:21,0:21:33.07:0,33,613	0/0:12,0:12:21.07:0,21,486	./.	0/0:27,0:27:51.17:0,51,1138	0/0:45,0:44:63.22:0,63,1468	0/0:21,0:21:24.08:0,24,560	0/0:20,0:20:39.13:0,39,876	0/0:32,0:32:78.25:0,78,1751	0/0:29,0:29:54.17:0,54,1193	1/1:15,13:28:30.10:460,30,0	0/0:15,0:15:24.08:0,24,560	1/1:15,13:28:27.09:414,27,0	1/1:14,18:32:31.70:673,32,0	0/0:28,0:28:18.05:0,18,377	0/0:26,0:26:48.15:0,48,1074	0/0:25,0:25:39.13:0,39,844	0/0:28,1:29:2.21:0,2,1000	0/1:31,1:32:3.81:4,0,840	0/0:29,0:29:33.07:0,33,709	1/1:13,24:37:63.21:965,63,0	1/1:15,10:26:33.08:445,33,0	1/1:9,19:27:45.15:667,45,0	1/1:13,11:23:39.13:597,39,0
chr10	4145721	.	G	GT	579.94	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=3.242;DP=472;FS=6.517;HRun=3;HaplotypeScore=64.0798;InbreedingCoeff=0.8178;MQ=67.04;MQ0=3;MQRankSum=0.015;QD=8.66;ReadPosRankSum=-0.405;VQSLOD=0.4650;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:15.57:0,16,89	0/0:7,0:7:16.81:0,17,141	0/0:22,0:9:11.61:0,12,102	0/1:23,0:7:3.14:3,0,44	0/0:28,0:28:55.21:0,55,445	0/0:7,0:7:17.96:0,18,150	0/0:16,0:16:41.21:0,41,354	0/0:17,0:17:33.80:0,34,242	0/0:11,0:11:29.98:0,30,263	0/0:38,0:37:75.48:0,75,686	0/0:8,0:8:16.17:0,16,120	0/0:10,0:10:20.29:0,20,153	0/0:17,0:17:27.79:0,28,210	0/0:18,0:18:40.56:0,41,299	0/0:18,0:18:49.82:0,50,458	0/0:17,0:17:35.77:0,36,292	0/0:20,0:19:27.51:0,28,183	0/0:14,0:14:19.78:0,20,192	0/0:16,0:16:37.32:0,37,286	0/0:11,0:11:17.97:0,18,148	0/0:13,0:13:28.94:0,29,225	0/0:14,0:14:26.81:0,27,245	0/0:19,0:18:42.41:0,42,357	0/0:16,0:16:29.66:0,30,235	0/0:24,0:24:53.23:0,53,468	1/1:16,0:16:32.96:314,33,0	1/1:18,0:18:39.70:327,40,0	1/1:1,9:10:6.02:72,6,0
chr10	4146153	.	CGGTCCAGAGCCAGT	C	11049.94	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=13.994;DP=638;FS=14.122;HRun=0;HaplotypeScore=248.1933;InbreedingCoeff=0.9896;MQ=83.90;MQ0=1;MQRankSum=-13.055;QD=57.55;ReadPosRankSum=1.581;VQSLOD=2.8059;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,14:24:39.13:1549,39,0	0/0:12,0:12:30.10:0,30,2004	0/0:24,0:24:49.38:0,49,2575	0/0:22,0:22:48.15:0,48,2427	0/0:15,0:15:36.12:0,36,2288	0/0:23,0:23:63.22:0,63,4179	0/0:24,0:24:51.15:0,51,2814	1/1:19,12:31:25.33:857,25,0	0/0:23,0:23:57.20:0,57,3675	0/0:30,0:30:72.25:0,72,4444	0/0:21,0:21:51.18:0,51,3198	0/0:24,0:24:54.19:0,54,3464	0/0:20,0:20:51.18:0,51,3205	0/0:29,0:29:72.24:0,72,4491	1/1:6,18:24:48.16:1933,48,0	0/0:31,0:31:81.27:0,81,5162	1/1:12,12:24:21.07:846,21,0	1/1:6,16:22:30.10:1163,30,0	0/0:21,0:21:48.16:0,48,2366	0/0:17,0:17:48.16:0,48,2991	0/0:49,0:49:99:0,119,7182	0/0:18,0:18:39.13:0,39,2496	0/0:17,0:17:33.11:0,33,2250	0/0:26,0:25:54.19:0,54,3484	1/1:3,11:14:30.10:1208,30,0	1/1:6,13:19:36.10:1201,36,0	1/1:6,20:26:48.16:1932,48,0	1/1:4,4:8:9.03:362,9,0
chr10	4146432	.	A	AG	1373	PASS	AB=0.947;AC=9;AF=0.161;AN=56;BaseQRankSum=4.546;DP=649;FS=7.976;HRun=6;HaplotypeScore=78.0942;InbreedingCoeff=0.8761;MQ=82.05;MQ0=0;MQRankSum=-2.345;QD=11.07;ReadPosRankSum=-0.151;VQSLOD=1.4024;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:45,0:44:34.03:316,34,0	0/0:7,0:7:18.03:0,18,179	0/0:22,0:20:34.23:0,34,301	0/0:24,0:24:52.69:0,53,471	0/0:25,0:25:65.49:0,65,637	0/0:19,0:19:54.06:0,54,529	0/0:36,0:36:99:0,99,979	1/1:4,22:27:65.37:748,65,0	0/0:22,0:22:63.13:0,63,635	0/0:30,0:30:72.12:0,72,716	0/0:20,0:20:54.02:0,54,528	0/0:28,0:28:78.15:0,78,779	0/0:24,0:24:66.14:0,66,672	0/0:23,0:23:60.05:0,60,580	0/0:19,0:19:54.11:0,54,545	0/0:17,0:17:45.10:0,45,459	0/0:33,0:33:87.11:0,87,857	0/0:30,0:30:72:0,72,692	0/0:14,0:14:30.06:0,30,304	0/0:15,0:15:42.07:0,42,415	0/0:28,0:28:78.13:0,78,775	0/0:28,0:28:76.01:0,76,743	0/0:17,0:17:48.07:0,48,472	0/0:23,0:23:60.08:0,60,595	0/0:21,0:21:54.02:0,54,516	0/1:17,1:18:10.19:132,0,10	1/1:26,0:26:21.17:226,21,0	1/1:8,0:8:22.16:117,22,0
chr10	4146438	.	G	GA	2934.22	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-8.305;DP=632;FS=5.791;HRun=7;HaplotypeScore=73.5022;InbreedingCoeff=0.9955;MQ=81.45;MQ0=0;MQRankSum=-1.592;QD=24.05;ReadPosRankSum=0.529;VQSLOD=4.0852;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,42:47:99:1303,108,0	0/0:6,0:6:15.02:0,15,144	0/0:18,0:16:27.55:0,28,206	0/0:26,0:26:53.87:0,54,472	0/0:22,0:22:60.09:0,60,578	0/0:20,0:20:51.05:0,51,479	0/0:37,0:37:99:0,102,962	1/1:22,0:22:37.67:183,38,0	0/0:22,0:22:63.02:0,63,595	0/0:28,0:28:74.60:0,75,701	0/0:19,0:19:48.04:0,48,455	0/0:27,0:27:75.11:0,75,717	0/0:25,0:25:72.07:0,72,679	0/0:23,0:23:66.08:0,66,623	0/0:19,0:19:51.03:0,51,465	0/0:16,0:16:48.06:0,48,457	0/0:31,0:31:81.01:0,81,729	0/0:27,0:27:59.97:0,60,539	0/0:12,0:12:33.02:0,33,310	0/0:15,0:15:36.06:0,36,347	0/0:28,0:28:75.10:0,75,719	0/0:29,0:29:72.08:0,72,679	0/0:16,0:16:39.06:0,39,375	0/0:22,0:22:60.06:0,60,566	0/0:22,0:22:42:0,42,380	1/1:4,13:17:42.13:503,42,0	1/1:3,25:28:69.21:832,69,0	1/1:0,8:8:24.07:288,24,0
chr10	4148066	.	GAATACA	G	1133.82	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.659;DP=644;FS=8.631;HRun=0;HaplotypeScore=129.3284;InbreedingCoeff=0.9699;MQ=76.58;MQ0=0;MQRankSum=-7.036;QD=66.70;ReadPosRankSum=-0.537;VQSLOD=3.3910;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,114,4234	0/0:12,0:12:36.12:0,36,1343	0/0:23,0:23:69.22:0,69,2297	0/0:12,0:12:33.05:0,33,1139	0/0:15,0:15:45.15:0,45,1671	0/0:22,0:22:66.23:0,66,2480	0/0:27,0:27:81.28:0,81,3050	0/0:23,0:23:69.23:0,69,2478	0/0:36,0:36:99:0,108,3805	0/0:25,0:25:75.26:0,75,2758	0/0:18,0:18:54.19:0,54,2033	0/0:20,0:20:57.18:0,57,2052	0/0:25,0:25:75.24:0,75,2666	0/0:42,0:42:99:0,126,4537	0/0:17,0:17:51.16:0,51,1770	0/0:20,0:20:60.21:0,60,2207	1/1:0,17:17:48.16:1229,48,0	0/0:15,0:15:42.14:0,42,1532	0/0:18,0:18:54.19:0,54,1947	0/0:22,0:22:66.23:0,66,2436	0/0:33,0:33:99:0,99,3592	0/0:26,0:26:78.27:0,78,2894	0/0:20,0:20:60.19:0,60,2161	0/0:26,0:26:72.92:0,73,2820	0/0:29,0:29:87.30:0,87,3222	0/0:28,0:28:84.28:0,84,2878	0/0:30,0:30:90.31:0,90,3361	0/0:4,0:4:12.04:0,12,399
chr10	4150604	.	GT	G	2614.05	PASS	AB=0.958;AC=16;AF=0.296;AN=54;BaseQRankSum=8.330;DP=601;FS=6.101;HRun=11;HaplotypeScore=65.6639;InbreedingCoeff=0.8722;MQ=66.11;MQ0=2;MQRankSum=1.219;QD=14.13;ReadPosRankSum=5.051;VQSLOD=3.9669;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:37:99:0,104,1061	0/0:12,0:12:30.06:0,30,312	0/1:10,0:8:3.76:4,0,61	0/1:9,0:8:3.39:3,0,96	0/0:38,0:39:99:0,103,1046	0/0:27,0:27:68.20:0,68,707	0/0:21,0:21:48.12:0,48,512	./.	0/0:20,2:23:33.92:0,34,538	0/0:30,0:31:78.01:0,78,804	0/0:21,1:23:23.31:0,23,433	0/0:23,0:23:57.10:0,57,582	0/0:17,0:18:41.95:0,42,415	0/0:23,0:22:56.90:0,57,560	1/1:1,21:22:53.92:443,54,0	0/0:21,1:22:32.47:0,32,536	1/1:3,31:34:83.89:690,84,0	1/1:0,12:12:26.97:222,27,0	0/0:18,0:19:47.56:0,48,436	0/0:23,1:24:47.35:0,47,671	0/0:21,0:21:49.64:0,50,496	0/0:21,0:21:51.12:0,51,541	0/0:14,0:17:44.61:0,45,426	0/0:14,0:14:42.09:0,42,439	1/1:6,14:20:26.94:219,27,0	1/1:4,18:22:53.92:443,54,0	1/1:5,30:35:71.89:591,72,0	1/1:7,13:19:22.53:194,23,0
chr10	4151195	.	C	CTCAG	4028.06	PASS	AC=6;AF=0.115;AN=52;BaseQRankSum=-9.257;DP=448;FS=8.735;HRun=0;HaplotypeScore=73.4473;InbreedingCoeff=0.9251;MQ=57.55;MQ0=15;MQRankSum=-0.227;QD=70.67;ReadPosRankSum=-0.117;VQSLOD=5.3946;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:24:60.16:0,60,1023	0/0:4,0:4:9.03:0,9,166	./.	0/0:6,0:4:6.02:0,6,109	0/0:26,0:26:69.24:0,69,1270	0/0:11,0:11:30.10:0,30,552	0/0:15,0:13:33.58:0,34,608	./.	0/0:16,0:16:45.15:0,45,822	0/0:30,0:29:78.25:0,78,1355	0/0:20,0:20:48.15:0,48,854	0/0:19,0:19:57.20:0,57,1049	0/0:8,0:8:18.06:0,18,331	0/0:6,0:6:12.04:0,12,221	0/0:16,0:16:48.15:0,48,853	0/0:11,0:11:33.11:0,33,607	0/0:20,0:19:39.10:0,39,701	0/0:6,0:6:15.05:0,15,269	0/0:13,0:11:24.08:0,24,442	0/0:31,0:30:87.28:0,87,1564	0/0:22,0:22:57.20:0,57,1048	0/0:20,0:20:54.19:0,54,994	0/0:17,0:15:45.15:0,45,828	0/0:18,0:18:42.13:0,42,742	0/0:23,0:22:57.20:0,57,1049	1/1:1,23:24:69.24:1781,69,0	1/1:3,15:17:48.16:1218,48,0	1/1:0,15:15:39.13:1029,39,0
chr10	4152616	.	ACCACACCTCCTG	A	10142.66	PASS	AB=0.529;AC=7;AF=0.125;AN=56;BaseQRankSum=15.172;DP=756;FS=8.251;HRun=0;HaplotypeScore=255.4512;InbreedingCoeff=0.8161;MQ=80.07;MQ0=0;MQRankSum=-13.777;QD=76.84;ReadPosRankSum=2.358;VQSLOD=3.5357;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:9,30:39:57.20:1972,57,0	0/0:15,0:15:45.15:0,45,2664	0/0:14,0:14:39.13:0,39,1789	0/0:26,0:26:75.24:0,75,3469	0/0:20,0:20:60.19:0,60,3458	0/0:26,0:26:78.26:0,78,4390	0/0:28,0:28:84.27:0,84,4719	0/0:22,0:22:63.20:0,63,2869	0/0:29,0:29:84.29:0,84,4907	0/0:22,0:22:63.15:0,63,3399	0/0:19,0:19:54.19:0,54,3043	0/0:26,0:26:78.25:0,78,4378	0/0:27,0:27:78.25:0,78,4374	0/0:22,0:22:63.22:0,63,3844	0/0:33,0:33:99:0,99,5660	0/0:31,0:31:93.32:0,93,5593	0/0:47,0:47:99:0,138,7940	0/0:24,0:24:72.25:0,72,4446	0/0:21,0:20:60.21:0,60,3194	0/0:35,0:35:99:0,105,5968	0/0:39,0:39:99:0,114,6252	0/0:24,0:24:66.23:0,66,3886	0/0:20,0:20:54.18:0,54,3130	0/0:32,0:32:96.33:0,96,5505	0/0:22,0:21:66.23:0,66,3715	0/1:6,49:55:35.74:5117,0,36	1/1:5,26:31:72.25:2711,72,0	1/1:2,5:7:9.03:342,9,0
chr10	4154360	.	CG	C	4275.45	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=12.202;DP=496;FS=2.908;HRun=4;HaplotypeScore=68.0609;InbreedingCoeff=0.9776;MQ=59.18;MQ0=9;MQRankSum=-4.850;QD=23.24;ReadPosRankSum=0.231;VQSLOD=3.8338;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,36:36:84.26:1003,84,0	0/0:6,0:5:15.04:0,15,192	0/0:27,0:10:12.58:0,13,123	0/0:13,0:7:11.90:0,12,126	0/0:15,0:15:33.04:0,33,404	0/0:21,0:21:63.18:0,63,845	0/0:33,0:33:89.87:0,90,1006	1/1:5,24:26:63.07:702,63,0	0/0:17,0:17:48.12:0,48,614	0/0:26,0:25:63.15:0,63,798	0/0:7,0:7:11.97:0,12,128	0/0:15,0:15:39.05:0,39,476	0/0:13,0:13:30.01:0,30,358	0/0:17,0:17:51.13:0,51,659	1/1:4,13:17:33.06:337,33,0	0/0:11,0:11:33.08:0,33,426	1/1:8,17:24:44.88:405,45,0	1/1:12,15:24:62.91:604,63,0	0/0:14,0:13:30.07:0,30,369	0/0:10,0:10:26.83:0,27,285	0/0:16,0:16:45:0,45,528	0/0:13,0:13:30.09:0,30,401	0/0:14,0:14:29.98:0,30,328	0/0:24,0:24:66.15:0,66,867	1/1:5,6:10:24.02:250,24,0	1/1:1,16:17:44.95:474,45,0	1/1:3,15:18:30.09:357,30,0	1/1:0,4:4:12.04:143,12,0
chr10	4154373	.	GA	G	974.02	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=10.171;DP=525;FS=1.072;HRun=8;HaplotypeScore=83.6552;InbreedingCoeff=0.9623;MQ=60.05;MQ0=6;MQRankSum=-4.643;QD=11.74;ReadPosRankSum=1.241;VQSLOD=2.9006;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,108,1186	0/0:5,0:5:12.04:0,12,165	0/0:31,0:13:15.73:0,16,291	0/0:15,0:9:11.77:0,12,124	0/0:15,0:14:25.52:0,26,457	0/0:22,0:22:65.42:0,65,887	0/0:27,0:27:75.24:0,75,1042	0/0:40,0:37:98.91:0,99,1016	0/0:20,0:20:60.18:0,60,810	0/0:28,0:27:73.02:0,73,981	0/0:5,0:5:15.05:0,15,207	0/0:16,0:15:44.17:0,44,591	0/0:15,0:15:44.74:0,45,595	0/0:22,0:22:63.18:0,63,862	1/1:12,5:16:40.72:314,41,0	0/0:8,0:8:24.07:0,24,327	1/1:19,6:24:41.44:302,41,0	1/1:27,1:27:40.32:393,40,0	0/0:19,0:18:50.87:0,51,634	0/0:9,0:9:26.99:0,27,339	0/0:16,0:16:45.14:0,45,626	0/0:11,0:11:33.10:0,33,441	0/0:10,0:10:19.87:0,20,246	0/0:27,0:27:75.24:0,75,1053	1/1:10,2:11:20.35:125,20,0	0/0:16,0:16:47.81:0,48,590	0/0:20,0:20:56.96:0,57,643	0/0:4,0:4:12.04:0,12,148
chr10	4154375	.	A	AG	1580.97	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=9.546;DP=533;FS=1.080;HRun=0;HaplotypeScore=83.1841;InbreedingCoeff=0.9801;MQ=62.30;MQ0=4;MQRankSum=-4.765;QD=19.52;ReadPosRankSum=2.151;VQSLOD=5.8385;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,111,1397	0/0:5,0:5:15.01:0,15,187	0/0:31,0:14:30.23:0,30,315	0/0:16,0:10:19.97:0,20,189	0/0:15,0:14:39.12:0,39,515	0/0:22,0:22:66.21:0,66,907	0/0:26,0:26:78.21:0,78,1052	0/0:41,0:39:99:0,104,1171	0/0:21,0:21:60.19:0,60,817	0/0:27,0:26:74.71:0,75,980	0/0:6,0:6:18.06:0,18,239	0/0:18,0:17:45.15:0,45,624	0/0:15,0:15:45.04:0,45,593	0/0:21,0:21:63.20:0,63,858	1/1:8,7:16:34.48:398,34,0	0/0:10,0:10:27.07:0,27,345	1/1:12,8:22:47.63:514,48,0	1/1:13,10:27:38.81:652,39,0	0/0:19,0:18:51.16:0,51,685	0/0:9,0:9:27.08:0,27,355	0/0:18,0:18:45.15:0,45,617	0/0:11,0:11:33.10:0,33,440	0/0:10,0:10:21.05:0,21,274	0/0:28,0:28:75.24:0,75,1031	1/1:5,7:13:20.29:177,20,0	0/0:17,0:17:51.13:0,51,681	0/0:20,0:20:57.19:0,57,774	0/0:4,0:4:12.04:0,12,168
chr10	4154377	.	G	GA	1331.64	PASS	AB=0.929;AC=13;AF=0.232;AN=56;BaseQRankSum=5.820;DP=526;FS=4.988;HRun=11;HaplotypeScore=81.9754;InbreedingCoeff=0.6856;MQ=62.44;MQ0=4;MQRankSum=-5.029;QD=6.76;ReadPosRankSum=-2.019;VQSLOD=1.9226;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:36,3:40:8.92:9,0,473	0/0:5,0:5:14.92:0,15,112	0/0:29,0:14:19.66:0,20,136	0/1:14,0:10:4.94:5,0,94	0/0:15,0:14:32.80:0,33,255	0/0:21,0:22:49.06:0,49,361	0/0:25,0:25:62.75:0,63,487	1/1:20,19:37:21.30:523,21,0	0/0:21,0:21:44.78:0,45,348	0/0:26,0:25:20.03:0,20,339	0/0:6,0:6:14.93:0,15,114	0/0:16,1:17:16.42:0,16,300	0/0:15,0:15:38.83:0,39,301	0/0:18,0:19:46.84:0,47,351	1/1:17,0:16:9.97:181,10,0	0/0:9,0:9:20.88:0,21,162	1/1:24,0:23:40.40:259,40,0	1/1:29,0:28:57.72:392,58,0	0/0:16,1:18:10.43:0,10,254	0/0:7,0:8:19.97:0,20,145	0/1:14,3:18:26.01:26,0,177	0/0:11,0:11:29.89:0,30,232	0/0:9,0:10:10.94:0,11,75	0/0:26,2:28:38.26:0,38,480	1/1:13,0:13:18.20:115,18,0	0/0:18,0:19:16.40:0,16,300	0/0:20,0:20:38.80:0,39,301	0/0:4,0:4:11.95:0,12,93
chr10	4155015	.	GGAAGAGGAGGAA	G	559.19	PASS	AB=0.877;AC=7;AF=0.130;AN=54;BaseQRankSum=7.567;DP=492;FS=36.429;HRun=0;HaplotypeScore=162.5901;InbreedingCoeff=-0.1595;MQ=42.65;MQ0=46;MQRankSum=-5.084;QD=5.48;ReadPosRankSum=-0.408;VQSLOD=1.3149;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:19:10.56:0,11,525	0/0:13,0:9:18.06:0,18,574	./.	0/0:8,0:2:6.02:0,6,100	0/0:18,0:14:39.13:0,39,1427	0/0:19,0:16:41.23:0,41,1579	0/0:30,0:24:57.20:0,57,2145	0/1:27,12:29:99:443,0,460	0/0:19,0:14:36.11:0,36,1466	0/0:27,0:26:78.22:0,78,2944	0/0:15,0:14:39.12:0,39,1565	0/0:24,0:22:49.01:0,49,2055	0/0:13,0:10:24.08:0,24,854	0/0:16,0:13:39.13:0,39,1407	0/1:8,0:6:26.40:26,0,81	0/0:16,0:14:33.11:0,33,1363	0/1:10,0:8:13.31:13,0,155	0/1:17,0:11:56.66:57,0,306	0/0:23,0:16:46.04:0,46,1009	0/0:18,0:15:39.13:0,39,1670	0/0:29,0:27:69.34:0,69,3226	0/0:16,0:12:33.11:0,33,1456	0/0:15,0:13:33.11:0,33,1493	0/0:33,0:30:81.28:0,81,3205	0/0:5,0:4:5.81:0,6,50	0/1:10,0:10:56.98:57,0,145	0/1:6,0:5:14.36:14,0,65	0/1:5,0:6:47.64:76,0,48
chr10	4155296	.	AACACACACAC	A	560.07	PASS	AB=0.848;AC=8;AF=0.154;AN=52;BaseQRankSum=4.499;DP=427;FS=3.632;HRun=0;HaplotypeScore=120.9324;InbreedingCoeff=0.2103;MQ=69.60;MQ0=12;MQRankSum=-2.419;QD=5.19;ReadPosRankSum=-0.680;VQSLOD=1.9558;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:30:44.48:44,0,138	0/0:2,0:3:5.93:0,6,74	./.	0/0:32,0:19:8.96:0,9,85	0/0:6,0:6:9.03:0,9,363	0/0:15,0:15:15.03:0,15,555	0/0:16,0:16:21.02:0,21,652	0/1:15,0:15:14.77:15,0,23	0/0:11,0:12:12.04:0,12,540	0/0:16,0:17:30.07:0,30,874	0/0:5,0:4:6.02:0,6,295	0/0:8,0:8:12.04:0,12,529	0/0:9,0:10:18.01:0,18,403	0/0:5,0:4:3.01:0,3,150	0/1:6,0:17:5.61:6,0,81	0/0:11,0:13:24.03:0,24,652	0/0:12,0:18:10.79:0,11,131	0/1:12,0:14:12.82:13,0,131	0/0:14,0:15:15:0,15,309	0/0:8,0:8:14.54:0,15,644	0/0:27,0:26:51.02:0,51,1666	0/0:18,0:17:27.03:0,27,819	0/0:12,0:13:11.74:0,12,412	0/0:22,0:21:30.99:0,31,1289	0/0:12,0:14:5.88:0,6,266	1/1:4,8:13:0.49:339,0,0	1/1:4,13:19:14.96:270,15,0	./.
chr10	4155415	.	TA	T	523.09	PASS	AB=0.896;AC=7;AF=0.125;AN=56;BaseQRankSum=4.615;DP=545;FS=1.888;HRun=13;HaplotypeScore=75.1510;InbreedingCoeff=0.5104;MQ=69.14;MQ0=1;MQRankSum=-1.863;QD=5.39;ReadPosRankSum=0.358;VQSLOD=2.3372;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,25:29:58.56:414,59,0	0/0:10,0:10:24.04:0,24,234	0/1:22,0:15:13.95:14,0,55	0/0:12,0:8:4.67:0,5,53	0/0:25,0:27:68.85:0,69,630	0/0:25,0:26:62.98:0,63,584	0/0:14,0:15:38.88:0,39,354	0/0:16,0:41:79.90:0,80,438	0/0:7,0:8:15.30:0,15,117	0/0:39,1:40:68.17:0,68,791	0/0:15,0:15:36.04:0,36,342	0/0:12,0:14:28.97:0,29,267	0/0:14,0:16:18.02:0,18,293	0/0:12,0:12:30.02:0,30,281	0/0:10,0:10:21.01:0,21,197	0/0:9,0:9:24.04:0,24,233	1/1:5,8:13:29.59:204,30,0	0/0:18,0:20:50.75:0,51,466	0/1:20,3:24:1.81:2,0,402	0/0:30,0:31:54.23:0,54,529	0/1:6,2:8:25.80:26,0,94	0/0:18,0:18:31.55:0,32,374	0/0:22,0:24:63.60:0,64,556	0/0:19,2:21:13.26:0,13,425	0/0:17,0:18:38.17:0,38,366	0/0:18,0:20:38.01:0,38,384	0/0:24,0:26:59.90:0,60,557	0/0:13,2:15:11.15:0,11,270
chr10	4155434	.	GAGA	G	2302.64	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=6.949;DP=525;FS=1.148;HRun=0;HaplotypeScore=84.9915;InbreedingCoeff=0.9866;MQ=70.03;MQ0=0;MQRankSum=-2.702;QD=34.37;ReadPosRankSum=2.216;VQSLOD=4.0971;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:93.11:0,93,1880	0/0:11,0:11:33.11:0,33,715	0/0:14,0:10:17.79:0,18,214	0/0:10,0:7:12.04:0,12,237	0/0:24,0:24:66.17:0,66,1384	0/0:22,0:22:57.18:0,57,1207	0/0:18,0:18:51.18:0,51,1136	0/0:33,0:33:87.24:0,87,1772	0/0:10,0:10:27.09:0,27,601	0/0:33,0:33:93.31:0,93,2018	0/0:20,0:20:57.20:0,57,1250	0/0:15,0:15:42.14:0,42,928	0/0:15,0:15:45.15:0,45,1002	0/0:15,0:15:42.13:0,42,895	1/1:0,15:15:33.11:538,33,0	0/0:13,0:13:30.10:0,30,669	1/1:1,9:10:24.01:360,24,0	1/1:4,18:22:54.18:879,54,0	0/0:22,0:22:66:0,66,1325	0/0:29,0:29:87.30:0,87,1908	0/0:7,0:7:21.07:0,21,469	0/0:9,0:9:27.09:0,27,603	0/0:21,0:21:60.18:0,60,1254	0/0:18,0:18:51.07:0,51,1067	1/1:2,18:20:42.14:686,42,0	0/0:17,0:17:51.17:0,51,1108	0/0:30,0:30:84.70:0,85,1756	0/0:17,0:17:45.15:0,45,936
chr10	4158466	.	G	GGGGGT	3411.67	PASS	AB=1.000;AC=12;AF=0.214;AN=56;BaseQRankSum=-4.016;DP=392;FS=1.158;HRun=0;HaplotypeScore=79.2078;InbreedingCoeff=0.6138;MQ=70.75;MQ0=2;MQRankSum=-5.394;QD=35.17;ReadPosRankSum=-3.648;VQSLOD=2.9136;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:5,0:5:30.70:44,0,31	0/0:6,0:6:18.05:0,18,316	0/0:19,0:13:7.44:0,7,431	0/0:22,0:15:22.24:0,22,488	0/0:11,0:11:24.54:0,25,434	0/0:25,0:24:66.20:0,66,1233	0/0:17,0:17:48.11:0,48,867	1/1:4,13:24:53.89:961,54,0	0/0:15,0:15:42.10:0,42,794	0/0:9,0:9:24.08:0,24,467	0/0:10,0:10:24.07:0,24,437	0/0:21,0:21:57.18:0,57,1023	0/0:11,0:11:24.08:0,24,476	0/0:9,0:9:27.08:0,27,477	1/1:3,13:16:24.08:701,24,0	0/0:10,0:10:30.10:0,30,595	0/1:12,0:12:7.81:124,0,8	1/1:5,9:14:30.09:833,30,0	0/0:13,0:13:36.10:0,36,635	0/0:18,0:18:39.13:0,39,773	0/0:20,0:20:48.13:0,48,838	0/0:16,0:16:43.03:0,43,822	0/0:16,0:16:42.12:0,42,712	0/0:19,0:19:57.20:0,57,1099	1/1:2,8:11:24.08:690,24,0	0/1:9,0:9:2.92:3,0,85	0/1:5,0:5:5.99:55,0,6	0/0:8,0:8:5.79:0,6,37
chr10	4158550	.	GAAA	G	2191.52	PASS	AB=0.561;AC=14;AF=0.250;AN=56;BaseQRankSum=7.689;DP=469;FS=5.778;HRun=14;HaplotypeScore=75.7386;InbreedingCoeff=0.8245;MQ=60.78;MQ0=4;MQRankSum=0.794;QD=14.71;ReadPosRankSum=5.743;VQSLOD=2.0243;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:29:82.34:0,82,1254	0/0:2,0:4:12.04:0,12,199	0/0:14,0:5:12.90:0,13,137	0/0:7,0:3:8.92:0,9,85	0/0:19,0:24:63.13:0,63,927	0/0:12,0:14:36.02:0,36,535	0/0:16,0:19:48.87:0,49,640	0/1:6,0:21:11.76:12,0,40	0/0:9,0:9:23.97:0,24,370	0/0:16,0:17:45.10:0,45,735	0/0:18,0:19:49.38:0,49,782	0/0:16,0:16:41.28:0,41,591	0/0:16,0:16:44.78:0,45,689	0/0:10,0:11:30.03:0,30,452	1/1:3,20:23:41.94:487,42,0	0/0:14,0:13:27.08:0,27,473	1/1:3,18:21:39.08:449,39,0	0/1:3,18:21:2.69:504,0,3	0/0:13,0:14:34.32:0,34,550	0/0:21,0:21:51.97:0,52,857	0/0:12,0:13:39.12:0,39,677	0/0:17,0:17:45.09:0,45,719	0/0:11,0:12:27.08:0,27,461	0/0:29,0:29:78.21:0,78,1358	1/1:3,9:12:30.06:349,30,0	1/1:0,0:21:50.55:295,51,0	1/1:3,0:23:35.24:214,35,0	1/1:1,0:6:11.77:71,12,0
chr10	4159117	.	C	CAGAA	2646.70	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=5.949;DP=672;FS=2.066;HRun=0;HaplotypeScore=128.2123;InbreedingCoeff=0.8118;MQ=56.67;MQ0=23;MQRankSum=-1.389;QD=23.63;ReadPosRankSum=-1.011;VQSLOD=3.5717;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:51,0:50:99:1387,128,0	0/0:11,0:11:24.05:0,24,365	0/0:24,0:15:28.96:0,29,296	0/0:23,0:15:27.07:0,27,326	0/0:26,0:25:60.11:0,60,846	0/0:26,0:25:59.49:0,59,803	0/0:32,0:31:75.63:0,76,1078	0/0:30,0:29:74.92:0,75,864	0/0:29,0:29:72.03:0,72,950	0/0:18,0:18:47.89:0,48,555	0/0:18,0:16:36.04:0,36,472	0/0:19,0:19:54.11:0,54,794	0/0:19,0:19:57.15:0,57,860	0/0:15,0:14:39:0,39,497	0/0:18,0:18:37.93:0,38,460	0/0:28,0:27:66.13:0,66,970	0/0:27,0:27:10.41:0,10,612	0/0:19,0:18:31.90:0,32,333	0/0:29,0:29:73.08:0,73,802	0/0:24,0:23:54.12:0,54,773	0/0:39,0:33:72.24:0,72,904	0/0:18,0:18:41.97:0,42,603	0/0:14,0:14:30.08:0,30,462	0/0:33,0:33:84.19:0,84,1284	0/0:20,0:20:38.11:0,38,516	0/1:20,0:20:25.72:651,0,26	1/1:4,25:30:24.65:468,25,0	1/1:11,0:9:11.71:286,12,0
chr10	4159135	.	GAC	G	686.27	PASS	AB=0.934;AC=14;AF=0.259;AN=54;BaseQRankSum=4.841;DP=638;FS=5.011;HRun=0;HaplotypeScore=101.0792;InbreedingCoeff=-0.1574;MQ=52.51;MQ0=35;MQRankSum=-0.141;QD=1.94;ReadPosRankSum=1.922;VQSLOD=1.7741;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:30,21:48:36.65:511,37,0	0/1:8,1:9:21.11:21,0,121	./.	0/0:12,0:4:2.94:0,3,18	0/0:21,2:21:22.36:0,22,530	0/1:21,4:24:26.61:27,0,387	0/1:30,3:31:68.89:69,0,223	0/1:29,0:27:5.37:5,0,96	0/0:26,1:27:9.01:0,9,516	0/0:15,0:15:6.30:0,6,117	0/1:17,0:15:16.83:17,0,157	0/0:18,0:18:13.90:0,14,413	0/1:18,2:20:33.27:33,0,334	0/0:18,0:16:18.03:0,18,237	0/0:23,0:22:20.75:0,21,175	0/1:19,4:22:39.25:39,0,272	0/1:29,0:28:17.84:18,0,86	0/0:22,0:20:9.72:0,10,62	0/0:23,0:23:11.57:0,12,105	0/1:16,3:18:58.99:59,0,238	0/1:35,3:32:30.01:30,0,324	0/0:22,0:22:32.93:0,33,451	0/0:16,0:16:15.05:0,15,218	0/1:35,1:36:2.74:3,0,568	0/1:23,0:22:4.70:5,0,19	0/0:20,0:18:32.88:0,33,241	0/0:24,0:24:27.22:0,27,183	0/0:13,1:11:14.62:0,15,76
chr10	4160402	.	CGGGCCA	C	723.42	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.449;DP=670;FS=0.000;HRun=0;HaplotypeScore=148.6011;InbreedingCoeff=0.9998;MQ=89.17;MQ0=0;MQRankSum=-5.878;QD=48.23;ReadPosRankSum=-1.008;VQSLOD=3.3245;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,120,4137	0/0:14,0:14:42.14:0,42,1452	0/0:27,0:27:78.26:0,78,2434	0/0:24,0:24:63.18:0,63,1833	0/0:30,0:30:86.86:0,87,3097	0/0:29,0:29:83.96:0,84,3110	0/0:22,0:22:66.21:0,66,2267	1/1:2,13:15:45.14:818,45,0	0/0:25,0:25:75.26:0,75,2604	0/0:18,0:18:54.19:0,54,1871	0/0:23,0:23:69.22:0,69,2292	0/0:26,0:26:75.26:0,75,2766	0/0:28,0:28:81.28:0,81,2867	0/0:25,0:25:75.26:0,75,2767	0/0:25,0:25:75.26:0,75,2770	0/0:24,0:24:72.25:0,72,2661	0/0:28,0:28:84.20:0,84,2892	0/0:19,0:19:54.19:0,54,2029	0/0:12,0:12:36.12:0,36,1306	0/0:26,0:26:75.26:0,75,2687	0/0:34,0:34:99:0,99,3635	0/0:25,0:25:75.26:0,75,2676	0/0:28,0:28:78.27:0,78,2846	0/0:23,0:23:69.24:0,69,2537	0/0:20,0:20:60.17:0,60,2003	0/0:22,0:22:66.23:0,66,2441	0/0:23,0:23:66.23:0,66,2394	0/0:15,0:15:45.15:0,45,1646
chr10	4160409	.	TTCC	T	424.95	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.915;DP=657;FS=0.910;HRun=0;HaplotypeScore=105.8372;InbreedingCoeff=0.9998;MQ=86.82;MQ0=0;MQRankSum=-5.269;QD=26.56;ReadPosRankSum=-1.624;VQSLOD=3.5626;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,117,2762	0/0:14,0:14:42.14:0,42,1033	0/0:21,0:21:44.45:0,44,1087	0/0:24,0:24:56.77:0,57,1019	0/0:29,0:29:84.27:0,84,1994	0/0:31,0:31:90.78:0,91,2185	0/0:20,0:20:60.21:0,60,1446	1/1:3,13:16:46.87:520,47,0	0/0:22,0:22:66.23:0,66,1597	0/0:15,0:15:42.14:0,42,1036	0/0:21,0:21:63.22:0,63,1536	0/0:25,0:25:69.24:0,69,1701	0/0:24,0:24:72.23:0,72,1712	0/0:24,0:24:72.25:0,72,1761	0/0:26,0:26:78.25:0,78,1827	0/0:26,0:26:78.27:0,78,1923	0/0:28,0:28:84.29:0,84,2022	0/0:21,0:21:60.16:0,60,1425	0/0:13,0:13:39.13:0,39,945	0/0:27,0:27:81.28:0,81,1974	0/0:32,0:32:96.31:0,96,2297	0/0:24,0:24:72.25:0,72,1775	0/0:26,0:26:78.27:0,78,1906	0/0:22,0:22:66.23:0,66,1561	0/0:21,0:21:63.21:0,63,1475	0/0:28,0:28:84.29:0,84,2026	0/0:22,0:22:66.23:0,66,1627	0/0:16,0:16:48.16:0,48,1151
chr10	4161151	.	A	AC	10028.73	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-13.561;DP=719;FS=0.000;HRun=0;HaplotypeScore=70.4884;InbreedingCoeff=0.9731;MQ=81.19;MQ0=0;MQRankSum=-6.309;QD=41.61;ReadPosRankSum=1.429;VQSLOD=5.4421;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,38:40:99:1581,99,0	0/0:10,0:10:27.08:0,27,362	0/0:23,0:23:69.21:0,69,906	0/0:22,0:20:49.59:0,50,572	0/0:22,0:22:66.22:0,66,919	0/0:14,0:14:42.14:0,42,584	0/0:36,0:36:99:0,105,1402	1/1:0,42:40:99:1833,120,0	0/0:25,0:25:75.25:0,75,1046	0/0:30,0:30:87.27:0,87,1171	0/0:17,0:17:51.17:0,51,713	0/0:31,0:31:93.29:0,93,1282	0/0:29,0:29:84.26:0,84,1144	0/0:29,0:29:84.28:0,84,1171	1/1:0,31:31:75.26:1198,75,0	0/0:25,0:25:75.22:0,75,1001	1/1:1,32:33:87.30:1390,87,0	1/1:1,22:22:60.20:959,60,0	0/0:16,0:16:48.10:0,48,629	0/0:20,0:20:60.19:0,60,817	0/0:59,0:59:99:0,174,2301	0/0:28,0:28:84.22:0,84,1132	0/0:17,0:17:48.10:0,48,630	0/0:25,0:25:69.21:0,69,947	1/1:1,22:23:60.20:958,60,0	1/1:1,20:21:60.20:957,60,0	1/1:1,16:17:3.20:626,3,0	1/1:0,11:11:33.11:527,33,0
chr10	4161496	.	CTGTGTG	C	447.75	PASS	AC=6;AF=0.111;AN=54;BaseQRankSum=4.335;DP=534;FS=29.150;HRun=0;HaplotypeScore=106.5404;InbreedingCoeff=0.6170;MQ=64.91;MQ0=12;MQRankSum=0.108;QD=6.89;ReadPosRankSum=0.862;VQSLOD=0.4855;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:14.92:0,15,184	0/0:4,0:4:6.02:0,6,123	./.	0/0:20,0:13:0:0,0,0	0/0:20,0:20:12.04:0,12,291	0/0:17,0:17:9.03:0,9,157	0/0:19,0:19:18.49:0,18,492	0/0:19,0:18:2.92:0,3,17	0/0:20,0:20:24.05:0,24,424	0/0:25,0:24:39.13:0,39,768	0/0:10,0:10:8.59:0,9,204	0/0:21,0:23:27.46:0,27,534	0/0:20,0:20:18.05:0,18,329	0/0:13,0:13:15.05:0,15,398	1/1:24,2:26:18.06:335,18,0	0/0:24,0:22:33.11:0,33,733	0/0:29,0:29:34.28:0,34,446	1/1:22,3:24:3.01:60,3,0	0/0:16,0:16:5.15:0,5,133	0/0:21,0:20:29.99:0,30,522	0/0:25,0:24:36.11:0,36,655	0/0:15,0:14:6.02:0,6,179	0/0:14,0:13:0:0,0,0	0/0:18,0:21:28.95:0,29,661	1/1:12,2:14:9.03:173,9,0	0/0:18,0:18:9.03:0,9,140	0/0:23,0:21:15.52:0,16,336	0/0:2,0:2:3.01:0,3,39
chr10	4161557	.	TAGGC	T	435.29	PASS	AB=1.000;AC=8;AF=0.143;AN=56;BaseQRankSum=2.411;DP=373;FS=7.163;HRun=0;HaplotypeScore=62.6966;InbreedingCoeff=0.3208;MQ=56.28;MQ0=10;MQRankSum=0.954;QD=4.31;ReadPosRankSum=-4.487;VQSLOD=-0.6829;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:6,16:21:5.81:63,6,0	0/0:5,0:5:15.02:0,15,257	0/0:7,0:3:2.18:0,2,69	0/0:18,0:4:9.01:0,9,126	0/0:14,0:14:30.04:0,30,529	0/0:13,0:13:30.08:0,30,579	0/0:18,0:17:32.84:0,33,564	1/1:3,13:16:35.89:396,36,0	0/0:9,0:9:18.01:0,18,329	0/0:12,0:12:21.05:0,21,366	0/0:5,0:5:9.02:0,9,156	0/0:17,0:17:40.91:0,41,820	0/0:13,0:13:33.10:0,33,729	0/0:7,0:7:15.04:0,15,289	0/1:23,0:22:23:23,0,295	0/0:5,0:5:12.04:0,12,266	0/1:17,0:17:48.10:48,0,173	0/1:9,0:9:36.41:36,0,85	0/0:12,0:12:21.05:0,21,378	0/0:10,0:10:27.09:0,27,585	0/0:29,0:29:67.41:0,67,1269	0/0:19,0:19:39.12:0,39,891	0/0:10,0:10:15.05:0,15,334	0/0:22,0:22:54.15:0,54,1144	0/1:14,0:14:6.67:7,0,156	0/0:15,0:15:42.14:0,42,868	0/0:8,0:8:20.97:0,21,402	0/0:4,0:4:12:0,12,145
chr10	4162104	.	CAATAAATA	C	290.98	PASS	AC=2;AF=0.053;AN=38;BaseQRankSum=2.999;DP=240;FS=0.000;HRun=0;HaplotypeScore=61.3882;InbreedingCoeff=0.4012;MQ=50.34;MQ0=5;MQRankSum=-2.570;QD=16.17;ReadPosRankSum=1.183;VQSLOD=1.9923;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:6:3.01:0,3,60	0/0:5,0:5:9.03:0,9,370	./.	./.	0/0:8,0:8:6.02:0,6,247	0/0:20,0:20:33.11:0,33,1339	./.	0/0:37,0:36:24.55:0,25,754	0/0:3,0:3:6.02:0,6,247	0/0:10,0:10:15.05:0,15,606	0/0:7,0:7:6.02:0,6,247	0/0:7,0:7:9.03:0,9,370	0/0:5,0:5:9.03:0,9,370	./.	0/0:7,0:7:6.02:0,6,246	0/0:5,0:5:12.04:0,12,494	0/0:25,0:24:24.08:0,24,726	0/0:12,0:12:21.07:0,21,781	0/0:12,0:10:12.04:0,12,492	0/0:7,0:7:9.03:0,9,370	0/0:9,0:9:9.03:0,9,348	./.	./.	0/0:5,0:5:3.01:0,3,123	./.	./.	1/1:11,7:18:15.05:376,15,0	./.
chr10	4162162	.	GAAGGAAGAAAAGAA	G	2888.66	PASS	AB=1.000;AC=12;AF=0.214;AN=56;BaseQRankSum=12.138;DP=361;FS=0.569;HRun=0;HaplotypeScore=146.8399;InbreedingCoeff=0.2855;MQ=58.66;MQ0=6;MQRankSum=-10.706;QD=26.50;ReadPosRankSum=1.559;VQSLOD=2.8498;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,7:9:1.83:607,2,0	0/0:5,0:5:15.05:0,15,904	0/0:25,0:12:29.17:0,29,956	0/0:24,0:6:12.04:0,12,190	0/0:11,0:11:33.11:0,33,2065	0/0:24,0:24:72.22:0,72,3779	0/0:10,0:10:30.10:0,30,1924	0/1:21,0:20:99:455,0,458	0/0:9,0:9:27.09:0,27,1677	0/0:22,0:22:60.21:0,60,4006	0/0:14,0:14:39.13:0,39,2432	0/0:11,0:11:33.11:0,33,2158	0/0:11,0:11:33.11:0,33,2022	0/0:8,0:8:24.08:0,24,1655	0/1:8,0:8:59.73:346,0,60	0/0:12,0:12:36.12:0,36,1931	0/1:11,0:11:99:332,0,256	0/1:11,0:11:99:398,0,201	0/0:12,0:12:36.12:0,36,1718	0/0:18,0:18:54.19:0,54,3406	0/0:10,0:10:30.05:0,30,1779	0/0:8,0:8:24.08:0,24,1587	0/0:9,0:9:27.09:0,27,1864	0/0:8,0:8:24.08:0,24,1479	1/1:8,0:8:18.06:445,18,0	0/1:14,0:14:35.17:180,0,35	0/1:20,0:20:99:223,0,200	1/1:7,0:5:11.61:63,12,0
chr10	4162166	.	GAAGAAAAGAAAAGAA	G	4249.04	PASS	AB=0.698;AC=15;AF=0.268;AN=56;BaseQRankSum=11.414;DP=368;FS=7.613;HRun=0;HaplotypeScore=151.8632;InbreedingCoeff=0.6834;MQ=57.44;MQ0=7;MQRankSum=-10.928;QD=38.63;ReadPosRankSum=1.579;VQSLOD=3.9707;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:9,0:9:39.08:251,0,39	0/0:5,0:5:12.04:0,12,873	0/0:25,0:12:21.96:0,22,916	0/0:26,0:5:9.03:0,9,183	0/0:11,0:11:30.10:0,30,2114	0/0:23,0:24:60.21:0,60,3771	0/0:11,0:11:33.11:0,33,2311	1/1:9,12:21:33.11:1123,33,0	0/0:9,0:9:24.08:0,24,1696	0/0:20,0:20:60.21:0,60,4162	0/0:13,0:14:39.13:0,39,2576	0/0:12,0:12:33.11:0,33,2345	0/0:11,0:11:30.10:0,30,2043	0/0:8,0:8:24.08:0,24,1745	1/1:2,7:9:15.05:640,15,0	0/0:13,0:13:33.11:0,33,2062	1/1:6,5:11:15.05:640,15,0	1/1:4,7:11:18.06:768,18,0	0/0:16,0:16:48.16:0,48,2591	0/0:17,0:18:51.18:0,51,3541	0/0:10,0:10:27.09:0,27,1778	0/0:8,0:8:24.08:0,24,1719	0/0:9,0:9:27.09:0,27,1960	0/0:8,0:8:24.08:0,24,1574	1/1:0,9:9:18.06:768,18,0	0/1:1,0:14:26.32:26,0,47	0/1:5,0:19:16.40:16,0,109	1/1:2,0:5:6.22:15,6,0
chr10	4162613	.	TTAAAG	T	2452.73	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.779;DP=604;FS=2.825;HRun=0;HaplotypeScore=113.1802;InbreedingCoeff=0.9988;MQ=80.81;MQ0=0;MQRankSum=-9.043;QD=51.10;ReadPosRankSum=1.915;VQSLOD=3.6726;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,144,4308	0/0:13,0:13:39.13:0,39,1222	0/0:17,0:17:47.74:0,48,1234	0/0:15,0:15:45.10:0,45,1243	0/0:25,0:25:72.25:0,72,2221	0/0:19,0:19:54.18:0,54,1624	0/0:30,0:30:84.29:0,84,2605	0/0:25,0:25:66.23:0,66,2060	0/0:18,0:18:51.16:0,51,1520	0/0:36,0:36:96.32:0,96,2838	0/0:15,0:15:39.13:0,39,1203	0/0:22,0:22:66.23:0,66,2066	0/0:25,0:25:75.24:0,75,2207	0/0:14,0:14:39.12:0,39,1153	0/0:15,0:15:39.13:0,39,1220	0/0:21,0:21:63.22:0,63,1971	0/0:38,0:38:99:0,114,3247	0/0:10,0:10:27.09:0,27,846	0/0:13,0:13:39.11:0,39,1056	0/0:25,0:25:69.23:0,69,2059	0/0:21,0:21:60.21:0,60,1868	0/0:33,0:33:96.33:0,96,2988	0/0:20,0:20:57.20:0,57,1781	0/0:22,0:22:63.20:0,63,1885	0/0:15,0:15:45.15:0,45,1410	1/1:1,17:18:51.12:1034,51,0	1/1:1,17:18:51.17:1050,51,0	1/1:0,12:12:24.08:511,24,0
chr10	4162837	.	ACC	A	6017.98	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=16.487;DP=796;FS=3.453;HRun=4;HaplotypeScore=110.5901;InbreedingCoeff=0.9988;MQ=85.58;MQ0=0;MQRankSum=-6.135;QD=38.83;ReadPosRankSum=-0.370;VQSLOD=3.7613;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:87.23:0,87,1515	0/0:7,0:7:21.07:0,21,393	0/0:30,0:30:84.28:0,84,1512	0/0:28,0:28:75.19:0,75,1286	0/0:28,0:28:81.28:0,81,1506	0/0:25,0:25:75.26:0,75,1405	0/0:22,0:22:60.21:0,60,1122	1/1:3,33:36:96.31:1395,96,0	0/0:22,0:22:66.23:0,66,1227	0/0:29,0:29:87.30:0,87,1628	0/0:28,0:28:84.29:0,84,1572	0/0:37,0:37:99:0,108,2023	0/0:36,0:36:99:0,105,1967	0/0:24,0:24:69.22:0,69,1244	1/1:0,36:36:90.30:1306,90,0	0/0:38,0:38:99:0,114,2121	1/1:1,29:30:75.25:1104,75,0	1/1:0,26:26:75.25:1084,75,0	0/0:29,0:29:75.26:0,75,1398	0/0:31,0:31:90.31:0,90,1685	0/0:34,0:34:96.33:0,96,1775	0/0:34,0:34:99:0,99,1837	0/0:20,0:20:60.21:0,60,1121	0/0:34,0:34:99:0,102,1842	1/1:1,26:27:78.26:1129,78,0	0/0:35,0:35:99:0,102,1887	0/0:31,0:31:90.31:0,90,1685	0/0:9,0:9:27.09:0,27,505
chr10	4169019	.	T	TA	937.99	PASS	AB=0.875;AC=14;AF=0.250;AN=56;BaseQRankSum=-5.527;DP=609;FS=1.631;HRun=14;HaplotypeScore=85.5242;InbreedingCoeff=0.1701;MQ=70.28;MQ0=1;MQRankSum=0.161;QD=3.58;ReadPosRankSum=-0.669;VQSLOD=0.8780;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,27:36:16.55:253,17,0	0/1:8,1:9:8.62:9,0,78	0/0:29,0:16:4.35:0,4,64	0/0:12,0:10:10.82:0,11,52	0/1:24,0:24:10.98:11,0,173	0/1:16,3:23:33.97:34,0,168	0/0:12,0:14:33.60:0,34,202	0/0:12,0:36:38.72:0,39,127	0/1:21,1:23:17.43:17,0,159	0/0:31,0:31:46.98:0,47,307	0/0:20,1:23:13.98:0,14,209	0/1:21,5:26:20.91:21,0,251	0/0:19,0:21:33.42:0,33,204	0/0:10,0:10:15.80:0,16,84	0/1:22,3:25:5.98:6,0,221	0/0:16,1:18:11.07:0,11,191	0/0:7,0:33:46.92:0,47,145	0/0:22,2:25:21.58:0,22,253	0/0:23,0:25:4.43:0,4,197	0/0:19,0:19:38.34:0,38,250	0/0:7,0:7:14.45:0,14,95	0/0:15,0:15:16.65:0,17,102	0/1:20,5:27:81.06:81,0,142	0/0:9,0:10:7.84:0,8,44	0/0:18,0:18:29.37:0,29,192	1/1:10,14:24:3.44:260,3,0	1/1:4,24:28:15.08:248,15,0	0/1:9,8:17:10.65:159,0,11
chr10	4170267	.	AAGAGTCAGTGTGTGAGCACACTGAGAG	A	1188.63	PASS	AB=0.811;AC=2;AF=0.036;AN=56;BaseQRankSum=5.075;DP=718;FS=10.215;HRun=0;HaplotypeScore=477.2833;InbreedingCoeff=-0.0409;MQ=78.46;MQ0=0;MQRankSum=-2.815;QD=42.45;ReadPosRankSum=2.290;VQSLOD=0.4709;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,151,11679	0/0:17,0:17:51.17:0,51,3830	0/0:18,0:18:49.96:0,50,723	0/0:25,0:25:46.97:0,47,865	0/0:18,0:18:54.18:0,54,3757	0/0:23,0:23:69.23:0,69,4706	0/0:28,0:28:84.29:0,84,4907	0/0:31,0:31:93.31:0,93,3130	0/0:36,0:36:99:0,105,9477	0/0:40,0:40:99:0,120,10176	0/0:14,0:14:42.14:0,42,3037	0/0:32,0:32:93.31:0,93,8190	0/0:29,0:29:87.30:0,87,7475	0/0:28,0:28:81.28:0,81,6372	0/0:35,0:35:99:0,105,8362	0/0:17,0:17:51.17:0,51,4592	0/0:26,0:26:61.80:0,62,770	0/0:27,0:27:81.28:0,81,6878	0/0:17,0:17:51.16:0,51,2056	0/0:23,0:23:69.24:0,69,5165	0/0:58,0:58:99:0,172,13492	0/0:24,0:24:72.25:0,72,5284	0/0:13,0:13:39.13:0,39,2749	0/0:24,0:24:72.25:0,72,5920	0/0:34,0:34:99:0,102,8746	0/1:14,1:15:99:213,0,463	0/1:7,6:13:99:1064,0,141	0/0:2,0:2:5.99:0,6,50
chr10	4172113	.	TAC	T	890.31	PASS	AB=0.816;AC=36;AF=0.720;AN=50;BaseQRankSum=3.012;DP=513;FS=7.678;HRun=0;HaplotypeScore=78.0338;InbreedingCoeff=0.4111;MQ=64.78;MQ0=10;MQRankSum=0.617;QD=2.54;ReadPosRankSum=1.469;VQSLOD=0.8420;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:21:1.82:6,2,0	1/1:4,2:6:3.01:32,3,0	./.	./.	1/1:12,1:14:5.73:34,6,0	1/1:12,1:16:5.85:46,6,0	1/1:26,2:30:14.69:116,15,0	./.	1/1:11,4:15:6.01:64,6,0	0/1:13,3:16:23.02:23,0,75	0/0:8,2:10:6.02:0,6,83	1/1:22,1:23:8.85:78,9,0	1/1:9,2:11:3.01:32,3,0	1/1:15,1:16:3:32,3,0	1/1:9,0:14:11.36:56,11,0	0/1:11,4:15:35.04:55,0,35	0/0:20,0:29:8.81:0,9,76	1/1:16,0:21:2.84:14,3,0	0/0:12,0:12:3.01:0,3,43	1/1:12,1:13:8.84:70,9,0	1/1:43,3:44:3.01:32,3,0	1/1:11,1:12:3.01:32,3,0	1/1:10,0:10:11.99:111,12,0	1/1:31,2:35:17.70:155,18,0	1/1:7,0:14:11.36:56,11,0	0/0:12,0:12:9.02:0,9,111	0/0:18,0:24:17.48:0,17,140	0/0:7,0:7:2.97:0,3,20
chr10	4172915	.	CTGTG	C	8553.47	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=12.437;DP=679;FS=1.079;HRun=0;HaplotypeScore=117.8488;InbreedingCoeff=0.9997;MQ=88.48;MQ0=1;MQRankSum=-8.274;QD=41.72;ReadPosRankSum=4.733;VQSLOD=5.3589;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:69.24:0,69,1821	0/0:13,0:13:33.11:0,33,861	0/0:28,0:28:72.25:0,72,1815	0/0:34,0:34:83.98:0,84,1947	0/0:19,0:19:57.20:0,57,1503	1/1:1,20:21:51.17:920,51,0	1/1:2,22:24:51.17:938,51,0	0/0:31,0:31:84.28:0,84,2139	1/1:1,19:20:45.15:828,45,0	0/0:21,0:21:60.20:0,60,1525	0/0:12,0:12:36.12:0,36,946	0/0:28,0:28:69.20:0,69,1688	0/0:37,0:37:99:0,108,2822	0/0:29,0:29:81.28:0,81,2081	1/1:5,34:39:87.18:1582,87,0	0/0:32,0:32:93.32:0,93,2449	1/1:2,23:25:57.20:1049,57,0	1/1:1,22:23:57.20:1049,57,0	0/0:24,0:24:72.14:0,72,1750	0/0:19,0:19:48.16:0,48,1258	1/1:3,27:29:63.21:1122,63,0	0/0:13,0:13:36.12:0,36,918	0/0:10,0:10:27.09:0,27,711	0/0:23,0:23:60.16:0,60,1493	1/1:0,23:23:60.20:1067,60,0	0/0:25,0:25:75.23:0,75,1870	0/0:38,0:37:99:0,99,2592	0/0:13,0:13:39.13:0,39,1030
chr10	4174034	.	TAATA	T	742.80	PASS	AC=6;AF=0.136;AN=44;BaseQRankSum=3.875;DP=240;FS=11.577;HRun=0;HaplotypeScore=44.8560;InbreedingCoeff=0.4881;MQ=48.06;MQ0=15;MQRankSum=4.340;QD=18.57;ReadPosRankSum=0.377;VQSLOD=1.6189;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:3:5.67:0,6,35	0/0:1,0:2:3.01:0,3,52	./.	./.	0/0:6,0:6:6.02:0,6,143	0/0:6,0:5:6.02:0,6,143	./.	0/0:34,0:21:30.10:0,30,536	0/0:4,0:4:6.02:0,6,143	0/0:6,0:6:12.02:0,12,224	0/0:4,0:4:6.02:0,6,143	./.	0/0:7,0:7:6.02:0,6,142	0/0:6,0:6:3.01:0,3,72	1/1:3,5:8:6.02:95,6,0	0/0:9,0:9:12.04:0,12,286	0/0:30,0:29:63.07:0,63,1186	1/1:13,13:25:28.37:670,28,0	0/0:19,0:15:18.03:0,18,318	0/0:4,0:4:6.02:0,6,132	./.	0/0:3,0:3:3.01:0,3,72	0/0:6,0:6:5.93:0,6,57	./.	1/1:0,6:6:6.02:95,6,0	0/0:7,0:8:9.03:0,9,186	0/0:8,0:8:3.01:0,3,52	0/0:8,0:9:20.84:0,21,225
chr10	4174069	.	T	TAAATAAATAAATAAAC	2279.65	PASS	AB=0.916;AC=11;AF=0.196;AN=56;BaseQRankSum=1.318;DP=281;FS=9.730;HRun=0;HaplotypeScore=112.5539;InbreedingCoeff=0.2913;MQ=60.40;MQ0=5;MQRankSum=-5.152;QD=17.95;ReadPosRankSum=-1.592;VQSLOD=1.2675;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:3,0:10:14.12:216,0,14	0/0:2,0:2:6.01:0,6,67	0/0:9,0:6:11.96:0,12,120	0/0:7,0:5:11.99:0,12,123	0/0:8,0:8:23.98:0,24,369	0/0:6,0:5:15.01:0,15,355	0/0:6,0:6:17.98:0,18,150	1/1:34,0:32:85.03:1094,85,0	0/0:7,0:7:18:0,18,311	0/0:6,0:6:15.04:0,15,387	0/0:8,0:8:21:0,21,405	0/0:7,0:7:17.98:0,18,150	0/0:6,0:6:15.01:0,15,276	0/0:5,0:5:12:0,12,215	0/1:12,0:12:99:103,0,101	0/0:7,0:7:21.03:0,21,636	0/0:28,0:28:75.09:0,75,1826	0/1:26,0:25:99:115,0,1054	0/0:21,0:20:39.87:0,40,687	0/0:8,0:8:23.97:0,24,218	0/0:3,0:3:5.99:0,6,49	0/0:2,0:2:6.01:0,6,165	0/0:5,0:5:12:0,12,113	0/0:3,0:3:8.98:0,9,72	0/1:12,0:12:98.90:99,0,186	0/1:9,0:9:68.74:310,0,69	1/1:0,9:13:1.51:233,2,0	1/1:10,0:7:11.97:264,12,0
chr10	4174294	.	GCA	G	2786.48	PASS	AB=0.853;AC=15;AF=0.268;AN=56;BaseQRankSum=8.253;DP=603;FS=10.946;HRun=0;HaplotypeScore=84.3186;InbreedingCoeff=0.3224;MQ=66.75;MQ0=1;MQRankSum=1.465;QD=12.12;ReadPosRankSum=1.178;VQSLOD=2.3891;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:38:17.97:0,18,149	0/1:3,1:4:23.94:24,0,132	0/0:23,0:14:5.59:0,6,34	0/0:21,0:19:23.97:0,24,323	0/0:16,0:16:36.06:0,36,521	0/0:24,0:24:60.19:0,60,917	0/1:19,2:21:59.73:60,0,546	1/1:13,9:22:27.03:296,27,0	0/0:20,1:21:23.73:0,24,812	0/0:22,1:23:24.21:0,24,854	0/0:17,0:17:42.13:0,42,642	0/1:28,4:33:37.03:37,0,1061	0/0:15,1:16:3.12:0,3,492	0/0:21,1:22:27.22:0,27,895	0/0:5,0:28:32.99:0,33,289	0/0:14,1:15:0.15:0,0,484	1/1:5,36:41:93.29:1115,93,0	0/0:10,0:22:22.27:0,22,184	0/1:20,2:22:26.84:27,0,548	0/1:13,0:13:1.09:1,0,443	0/0:24,0:24:36.95:0,37,761	0/1:9,2:11:8.89:9,0,357	0/0:17,0:17:20.82:0,21,577	0/0:28,3:31:36.27:0,36,1053	0/0:5,0:14:9:0,9,79	0/1:8,12:20:53.90:373,0,54	1/1:2,23:26:50.87:589,51,0	1/1:3,14:15:34.85:429,35,0
chr10	4175057	.	A	AG	1235.37	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-6.957;DP=639;FS=1.514;HRun=1;HaplotypeScore=62.3242;InbreedingCoeff=0.9994;MQ=78.80;MQ0=0;MQRankSum=-3.666;QD=42.60;ReadPosRankSum=1.929;VQSLOD=4.0801;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,102,1404	0/0:12,0:12:36.12:0,36,498	0/0:28,0:25:75.25:0,75,1047	0/0:19,0:19:39.16:0,39,619	0/0:17,0:17:51.17:0,51,711	0/0:21,0:21:63.19:0,63,862	0/0:22,0:22:63.19:0,63,859	0/0:29,0:29:87.27:0,87,1171	0/0:23,0:23:66.22:0,66,919	0/0:20,0:20:57.19:0,57,796	0/0:15,0:15:45.15:0,45,629	0/0:27,0:27:75.25:0,75,1042	0/0:24,0:24:72.24:0,72,1006	0/0:23,0:23:66.15:0,66,864	0/0:20,0:20:60.20:0,60,838	0/0:18,0:18:54.18:0,54,755	1/1:0,29:29:84.29:1330,84,0	0/0:22,0:22:66.22:0,66,917	0/0:17,0:17:51.16:0,51,698	0/0:24,0:24:69.20:0,69,929	0/0:45,0:45:99:0,132,1790	0/0:13,0:13:39.12:0,39,527	0/0:20,0:20:60.20:0,60,836	0/0:29,0:28:87.29:0,87,1216	0/0:11,0:11:33.11:0,33,462	0/0:26,0:26:78.26:0,78,1086	0/0:35,0:35:99:0,105,1463	0/0:14,0:14:42.14:0,42,587
chr10	4175614	.	TG	T	4623.80	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=10.923;DP=647;FS=1.227;HRun=1;HaplotypeScore=74.1388;InbreedingCoeff=0.9907;MQ=85.09;MQ0=0;MQRankSum=-1.791;QD=39.18;ReadPosRankSum=2.209;VQSLOD=5.5939;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,37:37:99:1376,102,0	0/0:12,0:12:33.11:0,33,518	0/0:18,0:18:54.05:0,54,798	0/0:26,0:27:79.47:0,79,1178	0/0:13,0:13:39.13:0,39,623	0/0:15,0:15:45.12:0,45,671	0/0:38,0:38:99:0,111,1717	0/0:24,0:24:72.22:0,72,1090	0/0:24,0:24:69.24:0,69,1102	0/0:22,0:22:60.20:0,60,959	0/0:17,0:17:48.16:0,48,766	0/0:27,0:27:81.28:0,81,1290	0/0:9,0:9:27.09:0,27,432	0/0:25,0:25:75.26:0,75,1198	1/1:0,20:20:57.19:796,57,0	0/0:13,0:13:39.13:0,39,623	0/0:47,0:47:87.06:0,87,1297	1/1:0,38:38:99:1551,111,0	0/0:18,0:18:54.18:0,54,839	0/0:11,0:11:33.11:0,33,527	0/0:52,0:52:99:0,157,2465	0/0:19,0:19:54.18:0,54,863	0/0:14,0:14:42.14:0,42,669	0/0:41,0:41:99:0,117,1820	1/1:0,23:23:66.18:901,66,0	0/0:29,0:29:87.28:0,87,1347	0/0:9,0:9:27.09:0,27,431	0/0:5,0:5:12.04:0,12,192
chr10	4175672	.	GCA	G	457.16	PASS	AB=0.914;AC=18;AF=0.375;AN=48;BaseQRankSum=6.239;DP=524;FS=3.320;HRun=0;HaplotypeScore=106.5096;InbreedingCoeff=0.0076;MQ=55.48;MQ0=2;MQRankSum=-3.337;QD=1.38;ReadPosRankSum=3.179;VQSLOD=1.9414;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:10,0:10:9.01:0,9,93	./.	./.	0/0:12,0:12:3.01:0,3,45	0/1:17,3:20:49.53:50,0,119	0/1:27,2:29:5.58:6,0,287	./.	0/0:17,0:17:14.97:0,15,157	0/0:20,0:20:3.01:0,3,43	0/0:8,0:8:6.02:0,6,79	0/1:22,3:26:23.12:23,0,351	0/1:11,1:12:54.49:58,0,54	0/1:18,2:20:8.49:8,0,238	1/1:20,0:20:22.19:110,22,0	0/0:16,0:15:3.92:0,4,202	1/1:40,0:40:5.59:37,6,0	1/1:23,0:23:11.36:55,11,0	0/1:18,0:18:7.72:8,0,103	0/1:6,0:6:10.80:11,0,54	0/1:38,9:47:73.44:73,0,157	0/1:15,2:17:17.92:18,0,122	0/0:12,0:12:5.14:0,5,224	0/1:33,5:37:78.92:79,0,472	1/1:15,0:15:16.66:76,17,0	0/0:29,0:27:38.76:0,39,337	0/0:13,0:13:13.80:0,14,132	0/0:10,0:10:15.22:0,15,135
chr10	4178161	.	GT	G	1178.05	PASS	AB=0.900;AC=12;AF=0.214;AN=56;BaseQRankSum=6.131;DP=606;FS=6.928;HRun=11;HaplotypeScore=63.7430;InbreedingCoeff=0.4956;MQ=69.71;MQ0=0;MQRankSum=-1.483;QD=7.05;ReadPosRankSum=2.460;VQSLOD=1.8295;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,23:29:1.14:403,1,0	0/0:14,0:15:30.21:0,30,284	0/1:25,3:16:11.50:11,0,91	0/1:12,1:11:18.30:18,0,81	0/0:25,1:29:49.99:0,50,668	0/0:21,1:22:26.48:0,26,487	0/0:14,0:14:36.07:0,36,375	0/0:15,1:29:22.12:0,22,241	0/0:19,0:20:47.07:0,47,465	0/0:22,0:22:63.14:0,63,653	0/1:21,3:25:56.29:56,0,430	0/0:19,0:19:49.35:0,49,501	0/0:23,0:23:69.09:0,69,703	0/0:18,0:18:48.07:0,48,495	1/1:2,15:17:29.94:246,30,0	0/0:25,0:25:35.62:0,36,548	0/0:17,0:18:47.99:0,48,494	1/1:5,15:21:34.36:276,34,0	0/0:20,0:20:48.08:0,48,491	0/0:28,2:30:13.85:0,14,544	0/1:6,1:7:11.39:11,0,77	0/0:20,1:21:21.68:0,22,414	0/0:23,0:25:65.81:0,66,657	0/0:16,0:16:42.11:0,42,448	1/1:5,22:27:38.93:320,39,0	0/0:33,1:34:65.59:0,66,891	0/0:25,0:25:72.16:0,72,755	0/0:13,1:14:2.43:0,2,213
chr10	4178987	.	A	AT	4762.77	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-13.823;DP=637;FS=1.751;HRun=1;HaplotypeScore=60.8028;InbreedingCoeff=0.9921;MQ=75.69;MQ0=0;MQRankSum=0.799;QD=41.78;ReadPosRankSum=-1.882;VQSLOD=4.6239;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,117,1517	0/0:5,0:5:15.05:0,15,195	0/0:15,0:15:34.30:0,34,392	0/0:15,0:15:15.75:0,16,327	0/0:30,0:30:84.27:0,84,1090	0/0:12,0:12:36.12:0,36,467	0/0:23,0:23:66.21:0,66,856	1/1:0,28:28:81.27:1212,81,0	0/0:19,0:19:54.18:0,54,701	0/0:33,0:33:99:0,99,1274	0/0:16,0:16:45.13:0,45,570	0/0:29,0:29:84.27:0,84,1090	0/0:23,0:23:69.21:0,69,880	0/0:18,0:18:48.16:0,48,623	0/0:21,0:21:63.19:0,63,805	0/0:27,0:27:75.22:0,75,948	1/1:1,37:38:99:1483,99,0	0/0:26,0:26:69.22:0,69,896	0/0:23,0:23:66.20:0,66,831	0/0:24,0:24:69.22:0,69,896	0/0:46,0:46:99:0,129,1661	0/0:26,0:26:78.24:0,78,999	0/0:13,0:13:33.09:0,33,413	0/0:22,0:22:66.21:0,66,854	0/0:13,0:13:36.12:0,36,467	1/1:0,20:20:60.20:899,60,0	1/1:0,21:21:57.19:854,57,0	1/1:0,7:7:21.07:315,21,0
chr10	4179167	.	TATAC	T	262.57	PASS	AB=0.964;AC=9;AF=0.161;AN=56;BaseQRankSum=2.966;DP=661;FS=11.414;HRun=0;HaplotypeScore=118.4868;InbreedingCoeff=0.7106;MQ=57.92;MQ0=2;MQRankSum=3.016;QD=2.13;ReadPosRankSum=1.168;VQSLOD=1.2204;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:16,22:38:3:49,3,0	0/0:7,0:7:18.06:0,18,398	0/0:21,0:11:6:0,6,96	0/0:19,0:17:26.92:0,27,369	0/0:23,0:23:42.10:0,42,811	0/0:18,0:18:30.04:0,30,610	0/1:26,1:27:6.67:7,0,699	0/0:38,0:38:53.29:0,53,1318	0/0:22,0:22:30.06:0,30,565	0/0:30,1:31:11.39:0,11,1206	0/0:20,0:20:33.11:0,33,787	0/0:29,0:29:42:0,42,788	0/0:19,0:19:28.32:0,28,591	0/0:20,0:20:33.09:0,33,677	1/1:5,18:23:9.03:146,9,0	0/0:22,0:22:42.59:0,43,905	0/0:26,0:25:15.02:0,15,279	1/1:6,9:15:9.03:146,9,0	0/0:19,0:19:33.03:0,33,653	0/0:27,0:27:48.11:0,48,858	0/0:41,0:41:84.12:0,84,1571	0/0:17,0:17:30.02:0,30,587	0/0:23,0:23:45.12:0,45,981	0/0:19,0:19:36.08:0,36,708	1/1:12,8:20:3.01:49,3,0	0/0:37,1:38:38.47:0,38,1754	0/0:24,0:24:27.01:0,27,508	0/0:14,0:14:36.09:0,36,674
chr10	4179195	.	C	CAT	168.87	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.962;DP=631;FS=1.110;HRun=0;HaplotypeScore=102.6184;InbreedingCoeff=0.5065;MQ=53.41;MQ0=6;MQRankSum=1.217;QD=8.04;ReadPosRankSum=0.430;VQSLOD=3.3632;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:29:5.95:0,6,45	0/0:9,0:9:23.75:0,24,319	0/0:19,0:5:3.27:0,3,79	0/0:30,0:16:38.70:0,39,426	0/0:18,0:18:45.10:0,45,615	0/0:21,0:21:39.10:0,39,546	0/0:26,0:26:66.06:0,66,856	0/0:49,0:48:99:0,135,1789	0/0:18,0:18:33.04:0,33,433	0/0:27,0:27:78.16:0,78,1053	0/0:17,0:17:44.88:0,45,670	0/0:22,0:22:42.01:0,42,549	0/0:13,0:12:31.57:0,32,399	0/0:14,0:13:33.08:0,33,451	0/0:21,0:21:15.01:0,15,159	0/0:22,0:21:51.07:0,51,719	1/1:7,14:20:2.60:246,3,0	0/0:14,0:14:21.90:0,22,236	0/0:26,0:24:57.09:0,57,757	0/0:19,0:19:44.76:0,45,650	0/0:41,0:41:88.36:0,88,1424	0/0:16,0:16:36.09:0,36,500	0/0:22,0:22:57.15:0,57,792	0/0:21,0:21:41.63:0,42,707	0/0:17,0:16:5.28:0,5,191	0/0:37,0:36:94.82:0,95,1285	0/0:20,0:19:24.03:0,24,321	0/0:19,0:18:45.06:0,45,601
chr10	4179204	.	ACT	A	93.20	PASS	AB=1.000;AC=6;AF=0.107;AN=56;BaseQRankSum=3.126;DP=593;FS=4.264;HRun=0;HaplotypeScore=99.2854;InbreedingCoeff=0.1474;MQ=52.10;MQ0=11;MQRankSum=-0.663;QD=1.15;ReadPosRankSum=-1.555;VQSLOD=1.6516;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,1:23:2.95:0,3,19	0/1:10,0:10:18.61:19,0,137	0/0:16,0:4:7.96:0,8,50	0/0:25,0:13:17.29:0,17,136	0/0:18,0:18:45.07:0,45,529	0/0:19,0:18:33.80:0,34,450	0/0:23,0:22:38.59:0,39,518	0/0:48,0:43:83.59:0,84,1118	0/0:18,0:17:1.96:0,2,190	0/0:27,0:27:13.38:0,13,805	0/0:17,0:17:30.10:0,30,474	0/1:22,0:22:1.40:1,0,390	0/0:12,0:11:28.82:0,29,318	0/0:13,0:12:18.03:0,18,233	0/0:19,0:19:14.99:0,15,168	0/0:20,0:19:44.76:0,45,582	1/1:13,4:16:7.18:119,7,0	0/0:18,0:18:16.64:0,17,237	0/0:27,0:23:44.98:0,45,557	0/1:15,0:15:49.15:49,0,180	0/0:35,0:35:32.42:0,32,882	0/0:15,0:14:24.08:0,24,375	0/0:22,0:22:45.61:0,46,676	0/0:21,0:21:2.85:0,3,509	0/1:17,0:16:19.18:19,0,162	0/0:33,0:32:22.57:0,23,802	0/0:23,0:22:21.46:0,21,214	0/0:17,0:16:23.06:0,23,166
chr10	4179221	.	GTC	G	608.89	PASS	AB=0.971;AC=18;AF=0.333;AN=54;BaseQRankSum=4.376;DP=581;FS=19.694;HRun=0;HaplotypeScore=97.4426;InbreedingCoeff=-0.0789;MQ=49.84;MQ0=25;MQRankSum=1.614;QD=1.74;ReadPosRankSum=3.754;VQSLOD=0.2656;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:24:0.01:0,0,0	0/1:14,0:14:6.49:6,0,135	./.	0/0:17,0:8:0:0,0,0	0/1:17,0:17:55.17:55,0,128	0/1:22,0:20:2.18:2,0,151	0/1:24,0:21:14.52:15,0,199	0/0:44,0:38:34.08:0,34,199	0/1:17,0:16:33.48:44,0,33	0/0:28,0:26:10.48:0,10,177	0/0:18,4:21:21.72:0,22,175	0/0:24,0:23:9.03:0,9,126	0/0:10,0:9:6.22:0,6,25	0/0:16,0:13:23.18:0,23,158	0/0:11,0:10:11.98:0,12,121	0/0:17,0:16:20.91:0,21,205	0/1:20,0:19:4.29:4,0,26	0/1:18,0:18:20.68:21,0,188	0/1:20,0:16:14.22:14,0,61	0/1:17,0:16:37.26:60,0,37	0/1:37,0:35:77.45:77,0,125	0/0:14,0:14:9.02:0,9,115	0/0:17,5:21:21.22:0,21,172	0/1:26,0:26:1.17:1,0,302	0/1:17,0:16:28.58:29,0,59	0/1:18,0:26:6.84:97,0,7	1/1:11,13:23:15.01:166,15,0	1/1:13,3:15:5.93:164,6,0
chr10	4179670	.	C	CGGAT	3059.57	PASS	AB=0.750;AC=9;AF=0.173;AN=52;BaseQRankSum=-8.375;DP=739;FS=1.949;HRun=0;HaplotypeScore=124.2378;InbreedingCoeff=0.7886;MQ=68.33;MQ0=7;MQRankSum=-0.425;QD=20.81;ReadPosRankSum=1.087;VQSLOD=3.5049;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:28,12:42:19.41:537,0,19	0/0:8,0:8:15.02:0,15,201	./.	./.	0/0:21,0:21:23.79:0,24,314	0/0:22,0:22:36.08:0,36,531	0/0:40,0:40:44.99:0,45,562	0/0:20,0:19:2.94:0,3,18	0/0:24,0:24:36.11:0,36,530	0/0:24,0:23:30.09:0,30,421	0/0:13,0:13:24.03:0,24,303	0/0:32,0:33:60.14:0,60,829	0/0:19,0:19:21:0,21,319	0/0:33,0:33:48.10:0,48,685	0/0:24,0:24:54.17:0,54,808	0/0:33,0:32:66.21:0,66,993	1/1:22,15:39:11.13:683,11,0	0/0:32,0:32:54.18:0,54,822	0/0:21,0:21:8.54:0,9,139	0/0:22,0:22:30:0,30,367	0/0:55,0:53:78.05:0,78,1172	0/0:15,0:15:27.06:0,27,369	0/0:19,0:19:33.01:0,33,455	0/0:37,0:40:39.02:0,39,510	0/0:12,0:12:27.05:0,27,366	1/1:14,17:30:47.58:1042,48,0	1/1:8,13:23:30.10:672,30,0	1/1:6,6:12:12.04:282,12,0
chr10	4179930	.	TGATA	T	2777.04	PASS	AB=1.000;AC=17;AF=0.327;AN=52;BaseQRankSum=9.255;DP=683;FS=2.385;HRun=0;HaplotypeScore=117.3773;InbreedingCoeff=0.8422;MQ=66.81;MQ0=5;MQRankSum=-3.037;QD=12.62;ReadPosRankSum=1.813;VQSLOD=3.4573;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:25,20:45:36.12:557,36,0	0/0:13,0:13:27.08:0,27,581	./.	./.	0/0:29,0:29:12.15:0,12,736	0/0:23,0:23:36.12:0,36,828	0/1:26,0:26:19.28:19,0,487	1/1:26,0:26:2.99:23,3,0	0/0:18,0:18:32.96:0,33,582	0/0:33,0:33:48.16:0,48,1097	0/0:23,0:23:51.16:0,51,1118	0/0:25,0:25:36.12:0,36,822	0/0:33,0:32:51.18:0,51,1151	0/0:26,0:26:30.03:0,30,620	1/1:15,13:29:36.12:539,36,0	0/0:26,0:26:45.15:0,45,1022	0/0:26,0:26:48.16:0,48,1084	1/1:11,13:24:5.10:391,5,0	0/0:17,0:19:9.03:0,9,157	0/0:15,0:31:42.14:0,42,756	0/0:36,0:36:54.17:0,54,1181	0/0:26,0:26:33.10:0,33,713	0/0:21,0:21:36.12:0,36,825	0/0:17,0:17:27.08:0,27,551	1/1:3,9:12:15.05:232,15,0	1/1:18,8:26:41.96:542,42,0	1/1:12,5:16:18.02:251,18,0	1/1:7,8:15:30.05:415,30,0
chr10	4179990	.	AGTGCTCAGCATGGAATCTCACAGCT	A	4497.71	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.018;DP=597;FS=2.483;HRun=0;HaplotypeScore=359.4936;InbreedingCoeff=0.9855;MQ=80.19;MQ0=6;MQRankSum=-6.094;QD=84.86;ReadPosRankSum=2.160;VQSLOD=3.8272;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:90.31:0,90,8413	0/0:15,0:15:45.15:0,45,4821	0/0:32,0:27:81.28:0,81,5977	0/0:23,0:20:60.21:0,60,4441	0/0:25,0:25:69.22:0,69,7366	0/0:20,0:20:57.20:0,57,5998	0/0:20,0:20:60.21:0,60,5403	0/0:40,0:39:99:0,114,8012	0/0:13,0:13:36.12:0,36,3830	0/0:23,0:23:63.22:0,63,6621	0/0:22,0:22:63.22:0,63,6605	0/0:16,0:16:42.14:0,42,4230	0/0:14,0:14:39.12:0,39,3446	0/0:21,0:21:63.22:0,63,6493	0/0:24,0:24:66.23:0,66,6619	0/0:23,0:23:66.23:0,66,6419	0/0:21,0:20:54.19:0,54,5174	0/0:26,0:26:66.23:0,66,6125	0/0:13,0:12:36.12:0,36,3468	0/0:19,0:19:48.16:0,48,4106	0/0:34,0:34:99:0,99,9274	0/0:15,0:15:45.15:0,45,4526	0/0:22,0:22:66.23:0,66,7210	0/0:18,0:18:48.16:0,48,5101	0/0:12,0:12:27.06:0,27,2355	1/1:5,20:25:56.84:2528,57,0	1/1:3,13:15:18.06:1153,18,0	1/1:6,5:12:12.04:817,12,0
chr10	4183595	.	CTGCACACACACA	C	1656.34	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=8.732;DP=789;FS=7.588;HRun=0;HaplotypeScore=254.2745;InbreedingCoeff=0.9944;MQ=59.78;MQ0=4;MQRankSum=-2.332;QD=42.47;ReadPosRankSum=-4.851;VQSLOD=1.6000;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:90.31:0,90,4600	0/0:12,0:12:33.10:0,33,1598	0/0:29,0:10:24.76:0,25,652	0/0:31,0:16:21.70:0,22,743	0/0:33,0:33:90.31:0,90,4262	0/0:19,0:19:54.19:0,54,2801	0/0:34,0:34:84.29:0,84,3875	1/1:12,27:39:81.22:1751,81,0	0/0:41,0:41:99:0,111,5548	0/0:37,0:37:96.33:0,96,4690	0/0:26,0:26:69.22:0,69,3136	0/0:30,0:31:86.09:0,86,4251	0/0:35,0:35:90.27:0,90,4323	0/0:21,0:21:54.17:0,54,2950	0/0:27,0:27:72.21:0,72,3859	0/0:20,0:20:51.18:0,51,2694	0/0:33,0:33:78.27:0,78,3983	0/0:23,0:23:66.23:0,66,3377	0/0:15,0:15:42.14:0,42,1637	0/0:27,0:27:66.23:0,66,3422	0/0:47,0:47:99:0,114,5364	0/0:24,0:24:66.22:0,66,2932	0/0:16,0:16:42.14:0,42,1823	0/0:25,0:25:69.22:0,69,3451	0/0:27,0:27:75.26:0,75,3995	0/0:27,0:27:75.26:0,75,4231	0/0:39,0:39:99:0,102,5571	0/0:14,0:14:39.13:0,39,2170
chr10	4185301	.	TCGCCGCCGCCGC	T	679.52	PASS	AC=2;AF=0.100;AN=20;BaseQRankSum=1.932;DP=118;FS=3.850;HRun=0;HaplotypeScore=62.1300;InbreedingCoeff=0.5052;MQ=67.41;MQ0=0;MQRankSum=-4.336;QD=33.98;ReadPosRankSum=1.963;VQSLOD=2.5568;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:1,0:1:3.01:0,3,46	./.	./.	0/0:1,0:1:3.01:0,3,127	./.	0/0:15,0:15:18.93:0,19,633	./.	./.	./.	./.	./.	0/0:2,0:2:3.01:0,3,136	./.	./.	./.	0/0:6,0:16:28.34:0,28,822	1/1:7,13:20:24.08:762,24,0	0/0:3,0:3:0:0,0,0	./.	0/0:19,0:19:10.80:0,11,372	./.	./.	0/0:21,0:22:27.08:0,27,1021	./.	./.	./.	0/0:2,0:2:3.78:0,4,11
chr10	4186182	.	G	GAGA	6704.12	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-12.309;DP=817;FS=4.711;HRun=0;HaplotypeScore=106.2236;InbreedingCoeff=0.9995;MQ=90.13;MQ0=0;MQRankSum=-2.193;QD=50.79;ReadPosRankSum=4.750;VQSLOD=7.2004;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,47:54:99:2648,120,0	0/0:11,0:11:30.10:0,30,489	0/0:26,0:26:54.22:0,54,1007	0/0:37,0:37:81.23:0,81,1333	0/0:24,0:24:72.25:0,72,1176	0/0:22,0:22:60.19:0,60,952	0/0:33,0:33:90.28:0,90,1414	0/0:38,0:38:99:0,99,1524	0/0:26,0:26:78.27:0,78,1269	0/0:32,0:32:87.29:0,87,1397	0/0:20,0:20:60.17:0,60,903	0/0:24,0:24:66.22:0,66,1066	0/0:24,0:24:72.25:0,72,1176	0/0:37,0:37:96.29:0,96,1496	1/1:3,34:38:87.30:1940,87,0	0/0:20,0:20:54.18:0,54,876	0/0:40,0:40:99:0,114,1726	1/1:2,23:25:63.22:1379,63,0	0/0:29,0:29:84.28:0,84,1327	0/0:31,0:31:81.28:0,81,1317	0/0:49,0:49:99:0,144,2294	0/0:21,0:21:63.21:0,63,1012	0/0:28,0:28:75.24:0,75,1195	0/0:37,0:37:99:0,108,1732	1/1:2,13:15:33.11:737,33,0	0/0:26,0:26:72.25:0,72,1173	0/0:41,0:41:99:0,120,1932	0/0:9,0:9:27.06:0,27,414
chr10	4186717	.	AG	A	869.06	PASS	AB=0.923;AC=9;AF=0.161;AN=56;BaseQRankSum=4.372;DP=462;FS=43.660;HRun=1;HaplotypeScore=57.9687;InbreedingCoeff=0.6936;MQ=76.48;MQ0=2;MQRankSum=-2.724;QD=11.29;ReadPosRankSum=-0.648;VQSLOD=-0.5847;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:24,7:31:76.99:718,77,0	0/0:6,0:6:1.12:0,1,122	0/0:26,0:13:20.68:0,21,178	0/0:25,0:18:8.27:0,8,150	0/0:18,1:19:22.93:0,23,313	0/0:14,1:15:40.63:0,41,354	0/0:23,0:23:53.70:0,54,480	0/0:31,0:31:34.66:0,35,541	0/1:11,1:12:6.78:7,0,134	0/0:20,0:20:53.47:0,53,495	0/0:14,0:14:37.95:0,38,311	0/0:13,1:14:26.49:0,26,262	0/0:11,1:12:1.51:0,2,226	0/0:12,0:11:10.62:0,11,154	1/1:7,0:7:10.02:55,10,0	0/0:10,1:11:6.86:0,7,205	0/0:23,0:23:50.25:0,50,416	1/1:12,0:11:19.62:108,20,0	0/0:9,0:9:26.99:0,27,261	0/0:9,0:9:9.24:0,9,189	0/0:8,0:8:22.76:0,23,192	0/0:14,0:14:37.67:0,38,326	0/0:20,0:20:41.15:0,41,439	0/0:17,0:17:3.70:0,4,275	1/1:15,0:15:25.85:138,26,0	0/0:24,0:24:57.94:0,58,504	0/0:19,0:19:32.19:0,32,253	0/0:14,0:14:29.22:0,29,231
chr10	4186853	.	C	CGT	106.09	PASS	AB=1.000;AC=13;AF=0.295;AN=44;BaseQRankSum=1.580;DP=556;FS=3.463;HRun=0;HaplotypeScore=85.2410;InbreedingCoeff=0.2710;MQ=64.24;MQ0=10;MQRankSum=-1.786;QD=0.64;ReadPosRankSum=-0.618;VQSLOD=1.6787;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:32,0:30:8.34:65,8,0	0/0:7,0:7:2.67:0,3,13	./.	./.	0/0:15,0:15:3:0,3,32	0/0:21,0:21:6.01:0,6,64	0/0:23,0:24:11.83:0,12,109	./.	0/1:20,0:18:0:0,0,0	./.	0/0:10,0:10:6.01:0,6,64	0/1:15,0:15:17.93:18,0,25	0/0:14,0:14:3:0,3,32	./.	0/0:15,0:14:0.89:0,1,2	0/0:21,0:21:3:0,3,32	1/1:14,7:21:5.98:64,6,0	1/1:17,0:16:3.35:16,3,0	0/0:14,0:15:2.63:0,3,14	0/0:27,0:27:3:0,3,32	0/0:52,0:49:8.71:0,9,83	0/0:18,0:18:2.96:0,3,20	0/0:12,0:12:3:0,3,31	0/1:25,0:26:12.08:12,0,66	1/1:17,0:17:5.99:50,6,0	1/1:19,0:19:0.46:2,0,0	./.	0/0:7,0:8:2.84:0,3,14
chr10	4186859	.	T	TGTGTGTGTGCGC	776.69	PASS	AB=1.000;AC=6;AF=0.107;AN=56;BaseQRankSum=3.283;DP=610;FS=4.376;HRun=0;HaplotypeScore=193.7567;InbreedingCoeff=0.2308;MQ=58.80;MQ0=16;MQRankSum=-1.822;QD=7.61;ReadPosRankSum=-0.044;VQSLOD=1.9679;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:34,0:32:82.56:107,0,83	0/1:9,0:8:5.20:5,0,241	0/0:29,0:20:33.01:0,33,380	0/0:19,0:14:24.08:0,24,393	0/0:15,0:15:30.04:0,30,466	0/0:23,0:23:50.88:0,51,940	0/0:24,0:24:46.57:0,47,916	0/0:29,0:27:23.74:0,24,758	0/0:19,0:17:24.07:0,24,350	0/0:22,0:22:39.16:0,39,659	0/0:14,0:14:30.07:0,30,577	0/0:18,0:17:33.08:0,33,543	0/0:17,0:17:39.11:0,39,645	0/0:16,0:15:39.12:0,39,583	0/1:18,0:17:71.72:149,0,72	0/0:19,0:19:36.11:0,36,618	0/0:25,0:24:5.96:0,6,509	0/1:20,0:17:27.87:313,0,28	0/0:20,0:20:49.70:0,50,761	0/0:31,0:31:60.68:0,61,1040	0/0:56,0:53:95.66:0,96,1550	0/0:20,0:19:33.10:0,33,506	0/0:14,0:14:27.08:0,27,475	0/0:33,0:33:63.62:0,64,1075	1/1:4,11:21:10.76:324,11,0	0/0:20,0:20:45.50:0,46,638	0/0:16,0:16:29.82:0,30,462	0/0:9,0:9:21.07:0,21,366
chr10	4190764	.	GAA	G	996.17	PASS	AB=0.807;AC=11;AF=0.204;AN=54;BaseQRankSum=7.343;DP=445;FS=1.678;HRun=15;HaplotypeScore=61.1268;InbreedingCoeff=0.6981;MQ=55.59;MQ0=4;MQRankSum=0.341;QD=8.17;ReadPosRankSum=3.992;VQSLOD=0.6073;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,25:31:65.91:581,66,0	0/0:6,0:7:18.06:0,18,235	0/1:9,1:3:17.33:17,0,46	./.	0/0:20,0:24:51.56:0,52,533	0/0:22,0:22:54.12:0,54,645	0/0:12,0:14:23.55:0,24,267	0/1:6,11:20:4.40:168,0,4	0/0:17,0:19:47.57:0,48,549	0/0:8,0:9:17.53:0,18,185	0/0:9,0:11:23.51:0,24,245	0/0:11,0:10:21.07:0,21,285	0/0:11,0:12:23.44:0,23,246	0/0:16,0:16:33.03:0,33,379	1/1:2,0:9:21.95:94,22,0	0/1:10,1:12:5.42:5,0,191	0/0:24,0:30:59.61:0,60,714	1/1:4,0:20:38.42:165,38,0	0/0:19,0:19:18.74:0,19,476	0/0:15,0:18:44.51:0,45,507	0/0:15,0:16:36.01:0,36,418	0/0:11,0:11:20.55:0,21,248	0/0:8,0:11:21.05:0,21,257	0/0:13,0:13:27.07:0,27,337	1/1:4,1:18:26.48:134,26,0	0/0:15,0:17:23.54:0,24,244	0/0:21,0:24:23.69:0,24,491	0/0:13,0:14:10.42:0,10,339
chr10	4193098	.	AT	A	1749.74	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=8.591;DP=627;FS=2.780;HRun=1;HaplotypeScore=65.3163;InbreedingCoeff=0.9982;MQ=76.34;MQ0=1;MQRankSum=-2.871;QD=38.88;ReadPosRankSum=2.086;VQSLOD=4.4411;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,45:45:99:1845,132,0	0/0:9,0:9:27.09:0,27,432	0/0:23,0:19:51.17:0,51,811	0/0:12,0:11:30.07:0,30,427	0/0:25,0:25:75.26:0,75,1183	0/0:24,0:24:72.22:0,72,1125	0/0:18,0:18:54.16:0,54,836	0/0:30,0:30:90.31:0,90,1420	0/0:21,0:21:63.21:0,63,1001	0/0:25,0:25:75.26:0,75,1191	0/0:12,0:12:36.12:0,36,571	0/0:25,0:25:75.26:0,75,1191	0/0:17,0:17:51.17:0,51,812	0/0:23,0:23:69.23:0,69,1095	0/0:25,0:25:75.24:0,75,1170	0/0:22,0:22:66.23:0,66,1055	0/0:20,0:20:57.19:0,57,907	0/0:28,0:28:84.29:0,84,1336	0/0:14,0:14:39.11:0,39,597	0/0:20,0:20:60.19:0,60,925	0/0:18,0:18:54.18:0,54,856	0/0:22,0:22:66.23:0,66,1052	0/0:17,0:17:51.13:0,51,728	0/0:33,0:33:99:0,99,1577	0/0:22,0:22:66.23:0,66,1053	0/0:20,0:20:60.20:0,60,959	0/0:44,0:42:99:0,132,2051	0/0:13,0:13:39.13:0,39,623
chr10	4194983	.	A	AGAGT	6742.02	PASS	AB=0.903;AC=13;AF=0.232;AN=56;BaseQRankSum=7.259;DP=751;FS=1.204;HRun=0;HaplotypeScore=157.4793;InbreedingCoeff=0.7120;MQ=56.47;MQ0=2;MQRankSum=-6.601;QD=28.69;ReadPosRankSum=-0.419;VQSLOD=4.8192;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:17,12:29:48.02:1035,48,0	0/0:14,0:14:36.09:0,36,547	0/0:28,0:11:24.03:0,24,348	0/0:42,0:21:30.97:0,31,353	0/0:25,0:25:66.21:0,66,1068	0/0:19,0:19:51.08:0,51,735	0/0:30,0:29:66.15:0,66,1025	1/1:32,0:30:56.50:892,57,0	0/0:31,0:31:69.19:0,69,1102	0/0:18,0:18:51.17:0,51,842	0/0:21,0:21:45.15:0,45,760	0/0:25,0:25:69.14:0,69,1069	0/0:26,0:26:66.16:0,66,1000	0/0:25,0:25:63.19:0,63,995	0/1:36,0:36:10.05:10,0,45	0/0:30,0:30:69.22:0,69,1123	0/1:13,8:22:2.74:776,0,3	0/1:29,0:29:58.70:122,0,59	0/0:23,0:21:54.13:0,54,748	0/0:20,0:20:54.16:0,54,860	0/0:39,0:39:90.05:0,90,1433	0/0:15,0:15:42.11:0,42,636	0/0:15,0:15:42.13:0,42,679	0/0:47,0:47:99:0,112,1715	0/0:21,0:21:1.60:0,2,46	1/1:13,11:24:57.12:1149,57,0	1/1:15,17:32:81.03:1566,81,0	1/1:15,16:31:69.10:1191,69,0
chr10	4195017	.	A	ATGAG	477.81	PASS	AB=0.981;AC=9;AF=0.167;AN=54;BaseQRankSum=2.596;DP=735;FS=4.576;HRun=0;HaplotypeScore=182.1818;InbreedingCoeff=0.2592;MQ=55.75;MQ0=6;MQRankSum=-2.619;QD=2.40;ReadPosRankSum=-1.665;VQSLOD=2.0859;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:16,23:40:21.06:477,21,0	0/0:12,0:12:21.07:0,21,325	./.	0/1:36,0:30:0.74:1,0,18	0/0:34,0:34:51.08:0,51,646	0/0:19,0:19:36.09:0,36,507	0/0:31,0:30:48.15:0,48,708	0/0:23,0:23:2.98:0,3,21	0/0:28,0:28:57.16:0,57,825	0/0:33,0:33:42.14:0,42,627	0/0:30,0:30:51.13:0,51,729	0/0:28,0:28:45.11:0,45,635	0/0:22,0:22:42.13:0,42,617	0/0:25,0:25:48.16:0,48,738	0/1:21,0:36:17.86:18,0,147	0/0:29,0:29:42.14:0,42,646	1/1:13,0:15:3:25,3,0	0/0:21,0:22:5.59:0,6,27	0/0:19,0:19:21.05:0,21,303	0/0:24,0:24:33.07:0,33,436	0/0:40,0:40:63.20:0,63,928	0/0:21,0:22:39.09:0,39,533	0/0:15,0:15:21.04:0,21,285	0/0:36,0:37:66.21:0,66,994	0/0:14,0:19:15.48:0,15,137	0/1:21,0:22:34.07:34,0,40	0/1:22,0:22:36.55:37,0,40	0/1:26,0:26:22.18:22,0,179
chr10	4195032	.	AG	A	561.57	PASS	AB=0.848;AC=3;AF=0.054;AN=56;BaseQRankSum=9.148;DP=691;FS=6.539;HRun=1;HaplotypeScore=127.2783;InbreedingCoeff=-0.0580;MQ=54.69;MQ0=15;MQRankSum=-6.169;QD=8.64;ReadPosRankSum=1.844;VQSLOD=1.1240;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:51.10:0,51,645	0/0:11,0:11:33.11:0,33,521	0/0:22,0:5:12.03:0,12,162	0/0:29,1:19:30.04:0,30,607	0/0:27,0:27:81.27:0,81,1262	0/0:17,0:17:45.15:0,45,713	0/0:30,0:29:87.30:0,87,1364	0/0:20,0:20:57.16:0,57,865	0/0:30,0:30:90.29:0,90,1390	0/0:29,0:29:84.27:0,84,1282	0/0:31,0:31:93.29:0,93,1426	0/0:29,0:29:87.30:0,87,1360	0/0:19,0:19:57.19:0,57,896	0/0:26,0:26:78.25:0,78,1206	0/0:33,0:33:52.96:0,53,613	0/0:26,0:26:78.25:0,78,1197	0/0:13,0:13:38.14:0,38,407	0/0:20,0:20:49.18:0,49,643	0/0:25,0:22:63.18:0,63,931	0/0:24,0:24:69.23:0,69,1078	0/0:44,0:44:99:0,123,1897	0/0:23,0:23:67.45:0,67,1004	0/0:10,0:10:30.10:0,30,471	0/0:33,0:33:99:0,99,1534	0/0:16,0:15:21.99:0,22,275	0/1:12,8:19:99:320,0,204	0/1:17,3:20:98.98:99,0,456	0/1:24,1:25:99:243,0,226
chr10	4195040	.	AG	A	85.90	PASS	AB=0.684;AC=1;AF=0.018;AN=56;BaseQRankSum=3.039;DP=697;FS=12.110;HRun=1;HaplotypeScore=126.9486;InbreedingCoeff=-0.0194;MQ=53.50;MQ0=15;MQRankSum=0.662;QD=6.61;ReadPosRankSum=0.146;VQSLOD=-0.4841;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:57.16:0,57,751	0/0:11,0:11:33.11:0,33,520	0/0:21,0:5:12:0,12,167	0/0:30,0:18:45.15:0,45,642	0/0:26,0:26:78.27:0,78,1230	0/0:18,0:18:45.14:0,45,687	0/0:31,0:30:90.29:0,90,1379	0/0:29,0:28:80.33:0,80,785	0/0:26,0:26:78.25:0,78,1207	0/0:25,0:25:75.26:0,75,1177	0/0:28,0:28:81.28:0,81,1263	0/0:30,0:30:90.29:0,90,1381	0/0:19,0:19:57.19:0,57,895	0/0:28,0:28:84.27:0,84,1290	0/0:32,0:32:43.93:0,44,466	0/0:26,0:26:78.25:0,78,1189	0/1:7,6:13:99:160,0,162	0/0:23,0:23:43.16:0,43,565	0/0:26,0:23:69.22:0,69,1034	0/0:23,0:23:69.22:0,69,1053	0/0:41,0:41:99:0,114,1779	0/0:24,0:24:70.46:0,70,1049	0/0:10,0:10:27.09:0,27,425	0/0:34,0:34:99:0,102,1562	0/0:20,0:19:24.89:0,25,298	0/0:19,0:18:53.04:0,53,635	0/0:18,0:18:44.57:0,45,567	0/0:25,0:25:65.99:0,66,612
chr10	4195044	.	AGTG	A	452.97	PASS	AB=0.843;AC=5;AF=0.089;AN=56;BaseQRankSum=11.117;DP=697;FS=5.385;HRun=0;HaplotypeScore=148.5214;InbreedingCoeff=-0.0988;MQ=53.81;MQ0=16;MQRankSum=-9.988;QD=4.08;ReadPosRankSum=6.524;VQSLOD=1.9100;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:66.20:0,66,1028	0/0:11,0:11:33.11:0,33,720	0/0:21,0:7:14.58:0,15,193	0/0:27,0:15:45.09:0,45,578	0/0:26,0:26:78.24:0,78,1652	0/0:16,0:16:42.14:0,42,963	0/0:31,0:30:90.30:0,90,1791	0/0:28,0:28:81.21:0,81,1188	0/0:26,0:26:78.27:0,78,1715	0/0:25,0:25:75.25:0,75,1571	0/0:29,0:29:87.29:0,87,1786	0/0:30,0:30:90.30:0,90,1820	0/0:20,0:20:60.20:0,60,1268	0/0:31,0:31:93.30:0,93,1844	0/1:32,0:32:91.66:92,0,204	0/0:25,0:25:75.25:0,75,1486	0/0:13,0:13:33:0,33,408	0/0:24,0:24:29.26:0,29,395	0/0:27,0:24:72.24:0,72,1235	0/0:21,0:21:63.21:0,63,1279	0/0:42,0:42:99:0,117,2339	0/0:24,0:24:63.32:0,63,1329	0/0:9,0:9:27.09:0,27,591	0/0:34,0:34:99:0,102,2109	0/1:21,0:20:30.83:31,0,275	0/1:14,5:18:82.85:83,0,402	0/1:12,4:16:72.10:72,0,220	0/1:9,14:23:92.62:293,0,93
chr10	4195048	.	AGTGAGTGAGAGAG	A	3636.32	PASS	AB=0.962;AC=9;AF=0.161;AN=56;BaseQRankSum=12.590;DP=707;FS=15.575;HRun=0;HaplotypeScore=269.3958;InbreedingCoeff=0.3306;MQ=54.58;MQ0=14;MQRankSum=-7.431;QD=22.73;ReadPosRankSum=1.014;VQSLOD=1.2684;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:67.47:0,67,2416	0/0:11,0:11:33.11:0,33,1626	0/0:17,0:6:14.58:0,15,322	0/0:27,0:18:54.13:0,54,1042	0/0:25,0:25:75.24:0,75,3521	0/0:16,0:16:42.10:0,42,2084	0/0:32,0:31:93.30:0,93,3918	0/1:32,0:31:88.12:88,0,389	0/0:27,0:27:81.28:0,81,4002	0/0:23,0:23:69.23:0,69,3483	0/0:30,0:30:90.31:0,90,4229	0/0:32,0:32:96.32:0,96,4081	0/0:22,0:22:66.23:0,66,2885	0/0:31,0:31:93.32:0,93,4189	0/1:33,0:33:99:351,0,276	0/0:25,0:25:75.26:0,75,3372	0/1:13,0:13:38.89:39,0,94	0/0:23,0:23:47.50:0,47,649	0/0:26,0:22:66.23:0,66,2388	0/0:22,0:22:66.21:0,66,2645	0/0:42,0:42:99:0,116,5030	0/0:25,0:25:75.26:0,75,3178	0/0:9,0:9:27.09:0,27,1255	0/0:35,0:35:99:0,105,4520	0/1:24,0:23:99:186,0,377	1/1:13,5:17:13.63:974,14,0	0/1:13,4:17:17.84:550,0,18	1/1:9,14:23:49.45:1448,49,0
chr10	4195069	.	GTGAA	G	1181.07	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=9.451;DP=757;FS=6.787;HRun=0;HaplotypeScore=160.2622;InbreedingCoeff=0.8295;MQ=64.63;MQ0=7;MQRankSum=-7.034;QD=11.04;ReadPosRankSum=2.304;VQSLOD=2.5078;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,105,2145	0/0:10,0:10:24.05:0,24,497	0/0:31,0:22:55.71:0,56,1092	0/0:30,0:23:62.83:0,63,1139	0/0:28,0:28:75.18:0,75,1551	0/0:15,0:15:36.08:0,36,685	0/0:33,0:32:72.22:0,72,1597	0/0:38,0:37:99:0,108,1102	0/0:28,0:28:75.26:0,75,1782	0/0:30,0:30:78.22:0,78,1629	0/0:30,0:30:87.28:0,87,2036	0/0:32,0:32:84.27:0,84,1902	0/0:28,0:28:60.19:0,60,1272	0/0:31,0:31:81.25:0,81,1843	1/1:7,27:34:42.14:705,42,0	0/0:25,0:25:66.21:0,66,1514	0/0:13,0:13:26.94:0,27,271	1/1:8,13:21:7.31:199,7,0	0/0:22,0:21:51.16:0,51,1151	0/0:21,0:21:57.16:0,57,1221	0/0:45,0:45:99:0,117,2425	0/0:27,0:27:78.23:0,78,1691	0/0:11,0:11:27.03:0,27,462	0/0:36,0:36:72.70:0,73,1640	1/1:2,20:22:24.08:410,24,0	0/0:24,0:23:29.71:0,30,529	0/0:12,0:12:14.02:0,14,167	0/1:30,0:30:5.89:6,0,323
chr10	4195992	.	GT	G	295.16	PASS	AB=0.941;AC=4;AF=0.071;AN=56;BaseQRankSum=2.877;DP=637;FS=3.135;HRun=10;HaplotypeScore=99.7989;InbreedingCoeff=0.4314;MQ=67.64;MQ0=10;MQRankSum=1.036;QD=4.92;ReadPosRankSum=-0.731;VQSLOD=1.5386;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:12,14:27:29.49:383,29,0	0/0:8,0:8:18.05:0,18,199	0/0:87,1:23:12.99:0,13,172	0/0:90,0:34:53.83:0,54,429	0/0:28,0:30:51.03:0,51,706	0/0:23,0:23:57.08:0,57,585	0/0:19,0:19:47.40:0,47,465	0/1:18,0:18:9.62:10,0,195	0/0:12,0:12:30.07:0,30,324	0/0:22,0:22:57.90:0,58,589	0/0:18,0:18:45.10:0,45,482	0/0:16,0:16:42.09:0,42,448	0/0:15,0:16:45.10:0,45,480	0/0:9,0:9:20.99:0,21,215	0/0:22,0:23:45.64:0,46,233	0/0:12,1:14:15.89:0,16,370	0/0:22,0:22:16.15:0,16,98	0/0:14,0:15:25.55:0,26,130	0/1:13,2:15:12.73:13,0,310	0/0:22,1:23:37.05:0,37,593	0/0:4,0:4:9.02:0,9,99	0/0:21,0:21:46.92:0,47,523	0/0:14,1:16:8.92:0,9,266	0/0:11,0:11:21.86:0,22,301	0/0:16,0:16:22.88:0,23,124	0/0:21,0:21:41.60:0,42,374	0/0:29,0:28:56.46:0,56,428	0/0:11,0:11:25.75:0,26,159
chr10	4196002	.	T	TTG	2695.07	PASS	AB=0.809;AC=15;AF=0.268;AN=56;BaseQRankSum=7.913;DP=641;FS=6.397;HRun=0;HaplotypeScore=107.6610;InbreedingCoeff=0.7285;MQ=65.78;MQ0=12;MQRankSum=-1.397;QD=15.23;ReadPosRankSum=2.639;VQSLOD=3.4966;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:23:18.95:151,19,0	0/0:7,0:7:18.05:0,18,247	0/0:83,1:21:35.13:0,35,339	0/0:92,0:36:61.47:0,61,457	0/0:30,0:30:69.54:0,70,922	0/0:25,0:25:68.96:0,69,777	0/0:18,0:18:25.64:0,26,542	0/1:7,1:22:10.88:190,0,11	0/0:12,0:12:36.02:0,36,437	0/0:26,0:26:74.97:0,75,823	0/0:18,0:18:51.05:0,51,624	0/0:15,0:15:45.04:0,45,543	0/0:17,0:17:47.46:0,47,566	0/0:10,0:10:26.68:0,27,285	1/1:1,18:20:48.16:823,48,0	0/0:14,0:14:36.10:0,36,454	0/1:22,0:22:37.08:37,0,64	1/1:2,11:14:24.08:433,24,0	0/0:14,0:14:42.03:0,42,485	0/0:24,0:24:71.62:0,72,819	0/0:7,0:7:20.98:0,21,217	0/0:21,0:21:59.80:0,60,690	0/0:16,0:16:19.95:0,20,380	0/0:12,0:12:36.04:0,36,431	1/1:1,10:13:21.07:366,21,0	0/1:16,0:20:79.49:160,0,79	1/1:5,1:30:37.91:513,38,0	1/1:1,0:12:23.95:217,24,0
chr10	4196308	.	A	ACACACC	179.49	PASS	AB=0.860;AC=3;AF=0.054;AN=56;BaseQRankSum=4.862;DP=710;FS=0.710;HRun=0;HaplotypeScore=150.1159;InbreedingCoeff=-0.0768;MQ=54.35;MQ0=37;MQRankSum=-0.152;QD=2.94;ReadPosRankSum=1.217;VQSLOD=2.3793;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:48:18.59:0,19,428	0/0:11,0:11:27.41:0,27,261	0/0:37,0:16:26.98:0,27,279	0/0:48,0:18:28.46:0,28,354	0/0:23,0:23:48.80:0,49,463	0/0:19,0:19:30.44:0,30,272	0/0:35,0:33:67.89:0,68,553	0/0:26,0:26:15.88:0,16,237	0/0:22,0:21:51.31:0,51,426	0/0:31,0:26:71.38:0,71,689	0/0:18,0:16:24.32:0,24,190	0/0:21,0:20:38.85:0,39,310	0/0:23,0:23:55.70:0,56,445	0/0:17,0:17:36.28:0,36,304	0/0:28,0:27:64.37:0,64,771	0/0:20,0:19:29.49:0,29,330	0/1:8,20:29:27.89:212,0,28	0/0:21,0:19:0.41:0,0,378	0/0:12,0:11:29.93:0,30,250	0/0:12,0:11:26.98:0,27,248	0/0:46,0:43:19.24:0,19,516	0/0:22,0:22:38.63:0,39,310	0/0:18,0:15:30.43:0,30,271	0/0:51,0:50:99:0,107,971	0/0:20,0:19:41.70:0,42,306	0/1:25,0:24:37.52:38,0,246	0/0:18,0:18:0.09:0,0,194	0/1:7,0:7:29.33:29,0,50
chr10	4196312	.	A	ACACC	2565.01	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=-0.982;DP=705;FS=20.143;HRun=0;HaplotypeScore=114.7797;InbreedingCoeff=0.7088;MQ=52.98;MQ0=39;MQRankSum=-0.518;QD=11.99;ReadPosRankSum=4.100;VQSLOD=1.3275;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:48,0:47:36.43:844,36,0	0/0:11,0:11:29.94:0,30,276	0/0:35,0:12:14.95:0,15,134	0/0:44,0:14:32.52:0,33,387	0/0:23,0:23:54.43:0,54,508	0/0:20,0:20:33.45:0,33,307	0/0:32,0:30:70.97:0,71,583	1/1:23,0:23:12.71:291,13,0	0/0:24,0:21:46.86:0,47,371	0/0:36,0:31:86.29:0,86,838	0/0:18,0:16:24.92:0,25,201	0/0:21,0:20:44.84:0,45,358	0/0:25,0:25:61.51:0,62,487	0/0:17,0:17:41.39:0,41,331	0/1:27,0:26:96.77:209,0,97	0/0:19,0:18:33.35:0,33,366	0/1:29,0:29:41.38:41,0,47	0/1:20,0:18:99:125,0,161	0/0:11,0:10:29.81:0,30,242	0/0:14,0:13:29.97:0,30,259	0/0:47,0:44:25.55:0,26,561	0/0:25,0:25:47.72:0,48,381	0/0:18,0:15:34.19:0,34,302	0/0:51,0:50:99:0,111,981	1/1:19,0:18:13.48:236,13,0	1/1:6,19:24:30.57:565,31,0	1/1:16,0:16:15.74:285,16,0	1/1:7,0:7:16.53:159,17,0
chr10	4197973	.	G	GA	1857.66	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-9.913;DP=724;FS=10.740;HRun=1;HaplotypeScore=69.2829;InbreedingCoeff=0.9989;MQ=89.84;MQ0=0;MQRankSum=-6.129;QD=35.05;ReadPosRankSum=2.618;VQSLOD=3.2421;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,52:53:99:1953,132,0	0/0:14,0:14:42.10:0,42,503	0/0:31,0:31:84.21:0,84,1020	0/0:26,0:26:75.11:0,75,937	0/0:27,0:27:81.26:0,81,1049	0/0:21,0:21:60.19:0,60,778	0/0:24,0:24:66.18:0,66,827	0/0:46,0:46:99:0,132,1637	0/0:27,0:27:81.19:0,81,1012	0/0:17,0:17:51.17:0,51,661	0/0:20,0:20:57.16:0,57,711	0/0:29,0:29:75.21:0,75,943	0/0:28,0:28:81.25:0,81,1034	0/0:24,0:24:69.15:0,69,810	0/0:24,0:24:66.20:0,66,831	0/0:24,0:24:69.19:0,69,854	0/0:33,0:33:99:0,99,1270	0/0:16,0:16:48.14:0,48,607	0/0:20,0:20:60.15:0,60,734	0/0:35,0:35:99:0,105,1345	0/0:32,0:32:92.74:0,93,1132	0/0:24,0:24:63.18:0,63,790	0/0:19,0:19:48.16:0,48,622	0/0:18,0:18:54.18:0,54,698	0/0:21,0:21:63.18:0,63,789	0/0:36,0:36:99:0,105,1337	0/0:26,0:26:75.21:0,75,942	0/0:9,0:9:27.05:0,27,332
chr10	4198533	.	T	TA	2039.46	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-9.896;DP=707;FS=2.811;HRun=9;HaplotypeScore=68.5696;InbreedingCoeff=0.9578;MQ=79.36;MQ0=0;MQRankSum=-0.542;QD=27.19;ReadPosRankSum=1.360;VQSLOD=4.0826;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:68.96:0,69,594	0/0:13,0:13:38.92:0,39,323	0/0:21,1:20:5.45:0,5,258	0/0:14,0:14:20.98:0,21,180	0/0:32,0:32:92.98:0,93,807	0/0:28,0:28:65.98:0,66,573	0/0:19,0:19:53.99:0,54,468	0/0:30,0:30:68.95:0,69,594	0/0:26,0:26:71.97:0,72,625	0/0:47,0:47:99:0,111,958	0/0:21,0:21:59.99:0,60,521	0/0:17,0:17:41.99:0,42,364	0/0:26,0:26:62.96:0,63,543	0/0:21,0:21:59.99:0,60,520	0/0:29,0:29:74.97:0,75,651	0/0:36,0:37:85.98:0,86,731	0/0:29,0:29:74.98:0,75,651	0/0:24,0:24:65.95:0,66,568	0/0:22,0:22:62.97:0,63,546	0/0:30,0:30:74.91:0,75,643	0/0:31,0:31:74.96:0,75,647	0/0:26,1:27:35.74:0,36,530	0/0:21,0:21:50.97:0,51,443	0/0:17,0:17:25.14:0,25,341	0/0:20,0:20:50.97:0,51,443	1/1:1,31:33:96.09:1041,96,0	1/1:4,24:28:68.92:743,69,0	1/1:2,12:14:36.10:398,36,0
chr10	4199375	.	C	CAG	264.18	PASS	AB=1.000;AC=23;AF=0.523;AN=44;BaseQRankSum=0.855;DP=529;FS=12.411;HRun=0;HaplotypeScore=78.8425;InbreedingCoeff=0.3370;MQ=59.50;MQ0=27;MQRankSum=-0.504;QD=1.04;ReadPosRankSum=-2.171;VQSLOD=0.3256;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:34,0:31:2.99:24,3,0	./.	./.	0/1:29,0:14:0:0,0,0	0/0:19,0:19:1.25:0,1,3	0/0:13,0:13:5.95:0,6,43	0/0:17,0:13:2.59:0,3,24	1/1:14,0:11:0.89:2,1,0	./.	./.	0/0:26,0:25:2.95:0,3,19	1/1:19,0:19:2.99:23,3,0	0/0:13,0:12:2.95:0,3,19	./.	1/1:18,0:17:5.99:47,6,0	0/0:24,0:24:6.01:0,6,62	1/1:20,0:18:3.01:35,3,0	1/1:19,0:17:8.98:74,9,0	1/1:16,0:14:3:27,3,0	./.	1/1:15,0:11:3.01:42,3,0	0/0:21,0:21:2.53:0,3,18	0/0:17,0:20:2.81:0,3,14	0/0:18,0:17:2.83:0,3,14	1/1:18,6:22:5.98:53,6,0	1/1:16,0:15:3.41:19,3,0	0/1:24,0:24:28.41:44,0,28	0/1:5,0:5:0:0,0,0
chr10	4199377	.	G	GAC	314.72	PASS	AB=0.795;AC=6;AF=0.107;AN=56;BaseQRankSum=1.347;DP=545;FS=58.384;HRun=0;HaplotypeScore=86.9316;InbreedingCoeff=0.5355;MQ=58.60;MQ0=29;MQRankSum=-1.561;QD=4.92;ReadPosRankSum=-2.805;VQSLOD=-0.2059;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:31:26.83:0,27,224	0/0:6,0:6:7.24:0,7,53	0/0:18,0:3:4.19:0,4,20	0/0:28,0:14:14.98:0,15,130	0/0:19,0:19:26.95:0,27,221	0/0:14,0:14:29.93:0,30,277	0/0:18,0:14:11.59:0,12,115	0/0:16,0:13:24.78:0,25,177	0/0:23,0:21:29.96:0,30,246	0/0:22,0:21:50.87:0,51,441	0/0:26,0:25:47.94:0,48,412	0/0:20,0:20:36.75:0,37,289	0/0:15,0:13:23.32:0,23,177	0/0:14,0:14:17.91:0,18,142	0/0:20,0:18:11.36:0,11,129	0/0:23,0:23:35.94:0,36,331	0/0:21,0:19:25.59:0,26,222	0/0:19,0:18:3.58:0,4,69	0/0:17,0:14:31:0,31,234	0/0:24,0:24:38.94:0,39,320	0/1:16,0:13:10.98:11,0,19	0/0:20,0:20:47.14:0,47,390	0/0:20,0:20:35.90:0,36,292	0/0:18,0:17:29.84:0,30,234	0/0:25,0:22:30.16:0,30,272	1/1:17,0:16:34.04:291,34,0	0/1:8,17:24:7.43:80,0,7	1/1:5,0:5:8.73:61,9,0
chr10	4199409	.	G	GAC	211.70	PASS	AB=0.779;AC=4;AF=0.071;AN=56;BaseQRankSum=2.999;DP=579;FS=28.786;HRun=0;HaplotypeScore=93.4944;InbreedingCoeff=0.0681;MQ=46.27;MQ0=21;MQRankSum=0.364;QD=2.90;ReadPosRankSum=5.429;VQSLOD=-0.0561;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:35:36.23:0,36,287	0/0:14,0:14:20.81:0,21,153	0/0:7,0:2:5.97:0,6,45	0/0:14,0:4:8.16:0,8,64	0/0:24,0:24:32.88:0,33,262	0/0:15,0:14:17.68:0,18,178	0/0:20,0:17:38.43:0,38,315	0/0:29,0:26:59.82:0,60,434	0/0:19,0:17:35.58:0,36,289	0/0:22,0:20:53.91:0,54,462	0/0:25,0:24:35.92:0,36,306	0/0:24,0:23:48.69:0,49,381	0/0:24,0:22:35.51:0,36,284	0/0:17,0:17:24.28:0,24,179	0/1:7,0:17:34.10:57,0,34	0/0:25,0:25:50.78:0,51,441	0/0:25,0:23:34.65:0,35,302	0/1:7,11:16:7.51:99,0,8	0/0:20,0:18:46.90:0,47,376	0/0:26,0:25:35.96:0,36,299	0/1:19,0:16:4.91:5,0,57	0/0:17,0:17:29.47:0,29,247	0/0:18,0:18:29.86:0,30,235	0/0:21,0:19:41.85:0,42,332	0/1:14,2:14:6.94:154,0,7	0/0:21,0:18:52.82:0,53,414	0/0:26,0:24:15.53:0,16,223	0/0:14,0:13:21.71:0,22,155
chr10	4201610	.	GTGTGTGTC	G	575.53	PASS	AB=0.955;AC=10;AF=0.192;AN=52;BaseQRankSum=4.933;DP=749;FS=3.803;HRun=0;HaplotypeScore=153.2965;InbreedingCoeff=0.1953;MQ=40.04;MQ0=161;MQRankSum=-3.438;QD=2.50;ReadPosRankSum=-3.582;VQSLOD=1.8332;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:40,0:31:14.33:14,0,54	0/0:18,0:11:17.42:0,17,205	./.	./.	0/0:21,0:18:18.72:0,19,303	0/0:30,0:24:38.06:0,38,679	0/1:34,0:27:14.45:14,0,57	0/0:22,0:16:23.80:0,24,189	0/0:33,0:22:25.24:0,25,553	0/0:49,0:22:11.65:0,12,328	0/0:18,0:14:23.22:0,23,186	0/0:30,0:20:29.84:0,30,491	0/0:27,0:22:57.69:0,58,747	0/0:16,0:10:20.89:0,21,247	0/0:18,0:9:0:0,0,0	0/1:29,0:24:19.90:20,0,356	0/0:42,0:31:15.58:0,16,755	0/1:23,0:16:27.67:183,0,28	0/0:20,0:12:2.15:0,2,59	0/0:19,0:12:8.89:0,9,148	0/0:75,0:59:28.35:0,28,647	0/0:20,0:12:17.99:0,18,267	0/0:12,0:9:14.73:0,15,182	0/0:49,0:43:92.61:0,93,1577	1/1:15,0:8:5.80:39,6,0	0/1:32,0:15:84.66:117,0,85	1/1:25,0:17:25.95:268,26,0	0/1:20,12:20:63.43:63,0,96
chr10	4201630	.	CTG	C	191.98	PASS	AB=0.877;AC=3;AF=0.054;AN=56;BaseQRankSum=5.281;DP=732;FS=5.169;HRun=0;HaplotypeScore=99.4115;InbreedingCoeff=0.0873;MQ=41.47;MQ0=147;MQRankSum=1.297;QD=1.90;ReadPosRankSum=-1.532;VQSLOD=1.5496;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:26,19:35:3.30:33,0,3	0/0:16,0:11:18.06:0,18,287	0/0:4,0:1:2.99:0,3,23	0/0:5,0:1:2.99:0,3,24	0/0:17,0:15:30.01:0,30,440	0/0:29,0:25:34.59:0,35,661	0/0:37,0:27:18.51:0,19,254	0/0:30,0:21:54.16:0,54,828	0/0:36,0:25:24.10:0,24,652	0/0:38,0:13:18.05:0,18,291	0/0:15,0:11:24.08:0,24,376	0/0:28,0:19:26.63:0,27,446	0/0:25,0:22:34.63:0,35,540	0/0:20,0:14:36.12:0,36,588	0/0:18,0:10:1.31:0,1,5	0/0:29,0:25:48.99:0,49,731	0/1:34,1:27:99:245,0,109	0/0:17,0:12:26.91:0,27,285	0/1:20,1:14:8.02:8,0,367	0/0:19,0:11:19.68:0,20,311	0/0:63,0:51:87.12:0,87,1383	0/0:18,0:12:24:0,24,329	0/0:11,0:8:6.02:0,6,100	0/0:55,0:49:94.90:0,95,1651	0/0:13,0:6:3.01:0,3,48	0/0:36,0:18:41.98:0,42,546	0/0:25,0:18:29.79:0,30,415	0/0:26,0:15:3.48:0,3,51
chr10	4201686	.	C	CTCTG	644.74	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=2.598;DP=584;FS=2.526;HRun=0;HaplotypeScore=117.8793;InbreedingCoeff=0.9211;MQ=59.46;MQ0=17;MQRankSum=-2.042;QD=22.23;ReadPosRankSum=-2.020;VQSLOD=3.3407;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:35:42.14:0,42,778	0/0:5,0:5:15.05:0,15,295	0/0:38,0:22:53.62:0,54,818	0/0:40,0:19:50.61:0,51,784	0/0:10,0:10:27.08:0,27,502	0/0:16,0:15:36.09:0,36,646	0/0:28,0:25:60.20:0,60,1169	0/0:23,0:12:36.12:0,36,717	0/0:27,0:26:78.25:0,78,1478	0/0:10,0:10:24.05:0,24,426	0/0:8,0:8:24.08:0,24,467	0/0:16,0:14:37.60:0,38,664	0/0:19,0:19:57.10:0,57,974	0/0:16,0:15:41.92:0,42,785	1/1:5,6:9:6.02:168,6,0	0/0:19,0:19:54.17:0,54,1029	0/0:23,0:22:60.21:0,60,1190	1/1:3,5:10:15:300,15,0	0/0:20,0:19:54.11:0,54,940	0/0:9,0:8:18.04:0,18,323	0/0:61,1:59:99:0,156,2987	0/0:14,0:14:42.13:0,42,798	0/0:10,0:10:30.10:0,30,585	0/0:46,0:46:99:0,126,2408	1/1:2,5:7:11.86:304,12,0	0/0:30,0:27:75.24:0,75,1420	0/0:21,0:18:42.08:0,42,785	0/0:7,0:6:11.73:0,12,185
chr10	4201891	.	TTTTGTTTTATTG	T	949.22	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=5.463;DP=440;FS=4.666;HRun=0;HaplotypeScore=141.4588;InbreedingCoeff=0.9014;MQ=64.33;MQ0=0;MQRankSum=-4.513;QD=39.55;ReadPosRankSum=1.950;VQSLOD=2.8993;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:93.32:0,93,4909	0/0:9,0:9:24.08:0,24,1085	0/0:18,0:18:33.10:0,33,1054	0/0:11,0:7:14.39:0,14,631	0/0:18,0:18:45.14:0,45,1458	0/0:15,0:15:42.14:0,42,2207	0/0:16,0:16:39.13:0,39,1637	0/0:30,0:30:69.23:0,69,2543	0/0:7,0:7:15.03:0,15,743	0/0:30,0:30:72.25:0,72,3183	0/0:13,0:13:39.13:0,39,1994	0/0:19,0:19:54.19:0,54,2951	0/0:11,0:11:30.10:0,30,1423	0/0:11,0:11:30.10:0,30,1631	1/1:0,6:6:12.04:431,12,0	0/0:16,0:16:39.13:0,39,1854	0/0:26,0:26:63.22:0,63,2982	1/1:1,10:11:6.02:215,6,0	0/0:13,0:13:33.11:0,33,1532	0/0:6,0:6:9.03:0,9,469	0/0:25,0:25:72.25:0,72,3030	0/0:11,0:10:27.09:0,27,1050	0/0:10,0:10:21.07:0,21,902	0/0:17,0:17:45.15:0,45,2268	1/1:0,7:7:12.04:429,12,0	0/0:23,0:23:63.22:0,63,2809	0/0:9,0:9:21.07:0,21,1028	0/0:18,0:18:45.63:0,46,1700
chr10	4202142	.	G	GTT	2364.51	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=0.190;DP=406;FS=13.029;HRun=10;HaplotypeScore=54.3320;InbreedingCoeff=0.9447;MQ=78.88;MQ0=1;MQRankSum=-0.138;QD=23.18;ReadPosRankSum=-1.498;VQSLOD=1.0454;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,26:35:74.73:1049,75,0	0/0:3,0:3:9.02:0,9,92	0/0:16,0:13:6.04:0,6,159	0/0:18,0:14:14.75:0,15,179	0/0:6,0:7:11.90:0,12,174	0/0:9,0:9:27.06:0,27,275	0/0:10,0:10:24.03:0,24,244	1/1:9,1:30:50.71:234,51,0	0/0:17,0:17:42.07:0,42,427	0/0:10,0:10:26.79:0,27,256	0/0:9,0:9:27.06:0,27,275	0/0:11,0:11:27.01:0,27,267	0/0:11,0:12:32.73:0,33,309	0/0:14,0:15:26.76:0,27,256	1/1:2,6:8:15.05:223,15,0	0/0:10,0:10:21:0,21,206	0/0:24,0:25:68.86:0,69,674	1/1:2,10:13:33.11:476,33,0	0/0:18,0:18:48.05:0,48,460	0/0:17,0:17:45.08:0,45,451	0/0:26,0:26:56.83:0,57,561	0/0:11,0:11:27.04:0,27,274	0/0:9,0:9:23.77:0,24,225	0/0:15,0:15:33.03:0,33,329	1/1:0,14:16:41.11:555,41,0	0/0:13,0:14:38.83:0,39,378	0/0:13,0:13:36.08:0,36,366	0/0:7,0:8:23.79:0,24,225
chr10	4202979	.	GT	G	638.43	PASS	AB=0.749;AC=9;AF=0.161;AN=56;BaseQRankSum=4.172;DP=592;FS=0.507;HRun=15;HaplotypeScore=69.9361;InbreedingCoeff=0.4201;MQ=67.52;MQ0=1;MQRankSum=0.420;QD=4.26;ReadPosRankSum=2.062;VQSLOD=1.1164;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:46:61.02:0,61,364	0/0:11,0:13:23.80:0,24,192	0/0:15,0:6:3.65:0,4,17	0/0:14,1:12:8.68:0,9,50	0/0:18,0:19:24.31:0,24,199	0/0:17,0:20:38.62:0,39,300	0/1:14,2:18:0.28:0,0,194	0/1:13,9:23:89.22:115,0,89	0/0:20,0:24:35.84:0,36,304	0/0:20,0:21:35.80:0,36,296	0/0:19,0:22:30.71:0,31,262	0/0:10,2:12:4.72:0,5,162	0/0:17,0:17:32.95:0,33,276	0/0:19,2:21:20.61:0,21,296	0/0:17,0:17:32.82:0,33,273	0/1:16,1:22:0.02:0,0,213	0/1:7,19:27:0.87:115,0,1	0/0:17,2:23:9.24:0,9,267	0/0:18,0:20:38.61:0,39,305	0/0:25,1:30:39.98:0,40,411	0/0:15,0:15:26.97:0,27,229	0/0:18,0:20:35.66:0,36,289	0/0:21,1:28:40.21:0,40,405	0/0:17,0:19:38.57:0,39,300	0/0:20,1:23:28.06:0,28,327	1/1:10,14:25:16.94:227,17,0	1/1:8,18:27:10.99:241,11,0	0/1:3,5:8:31.95:75,0,32
chr10	4203433	.	C	CA	1104.18	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-6.677;DP=678;FS=1.465;HRun=1;HaplotypeScore=67.5394;InbreedingCoeff=0.9956;MQ=75.97;MQ0=1;MQRankSum=-2.085;QD=34.51;ReadPosRankSum=-5.032;VQSLOD=1.9214;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,144,1846	0/0:8,0:8:21.05:0,21,254	0/0:19,0:18:46.91:0,47,496	0/0:16,0:18:38.49:0,38,372	0/0:26,0:26:75.22:0,75,935	0/0:21,0:21:63.19:0,63,801	0/0:31,0:31:81.12:0,81,950	1/1:1,31:32:93.16:1199,93,0	0/0:17,0:17:51.12:0,51,616	0/0:28,0:28:81.26:0,81,1039	0/0:17,0:17:51.15:0,51,645	0/0:30,0:30:90.25:0,90,1130	0/0:22,0:22:65.87:0,66,804	0/0:33,0:33:99:0,99,1245	0/0:23,0:23:69.22:0,69,891	0/0:24,0:24:72.10:0,72,881	0/0:36,0:36:99:0,108,1346	0/0:20,0:20:57.14:0,57,694	0/0:17,0:17:48.14:0,48,597	0/0:23,0:23:69.21:0,69,879	0/0:48,0:48:99:0,144,1799	0/0:25,0:25:72.20:0,72,902	0/0:15,0:15:42.14:0,42,542	0/0:19,0:19:54.18:0,54,698	0/0:24,0:24:72.15:0,72,872	0/0:20,0:20:54.16:0,54,670	0/0:22,0:21:63.20:0,63,811	0/0:11,0:11:33.11:0,33,427
chr10	4205185	.	GTCTCTCTCTCTC	G	420.21	PASS	AB=1.000;AC=12;AF=0.250;AN=48;BaseQRankSum=4.371;DP=403;FS=4.685;HRun=0;HaplotypeScore=124.1732;InbreedingCoeff=0.4160;MQ=74.75;MQ0=13;MQRankSum=-2.844;QD=4.94;ReadPosRankSum=-0.243;VQSLOD=2.0870;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:21:8.97:0,9,86	./.	./.	./.	0/0:16,0:16:9.02:0,9,232	0/0:21,0:20:13.19:0,13,397	0/0:25,0:24:13.81:0,14,484	1/1:19,0:18:0.47:1,0,0	0/0:9,0:9:9.03:0,9,362	0/0:11,0:10:9.02:0,9,224	0/0:18,0:18:3.01:0,3,102	0/0:11,0:11:12.04:0,12,354	0/0:7,0:6:5.99:0,6,50	./.	0/0:5,0:5:9.03:0,9,253	0/0:14,0:15:12.35:0,12,520	1/1:17,0:16:2.49:96,2,0	0/1:14,0:13:4.31:4,0,416	0/0:16,0:16:6.91:0,7,279	0/1:12,0:12:11.73:12,0,97	0/0:17,0:16:12.03:0,12,411	0/0:10,0:10:9.03:0,9,262	0/0:9,0:8:3.01:0,3,122	0/0:25,0:23:21.07:0,21,709	0/0:12,0:11:9.02:0,9,162	1/1:7,1:8:6.02:135,6,0	1/1:4,1:7:3.01:96,3,0	1/1:6,2:8:6.02:202,6,0
chr10	4205234	.	TCA	T	685.71	PASS	AB=1.000;AC=27;AF=0.540;AN=50;BaseQRankSum=4.297;DP=406;FS=1.732;HRun=0;HaplotypeScore=68.0184;InbreedingCoeff=-0.0111;MQ=44.32;MQ0=35;MQRankSum=2.953;QD=2.16;ReadPosRankSum=-0.871;VQSLOD=1.1752;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:8,0:7:1.48:0,1,56	./.	./.	0/1:15,0:14:36.09:36,0,67	0/1:22,0:19:46.88:47,0,55	0/1:22,0:22:11.99:18,0,12	0/1:18,0:13:3.64:32,0,4	1/1:9,0:8:11.86:82,12,0	0/0:16,0:14:0.62:0,1,156	0/1:9,0:9:2.01:2,0,54	0/0:22,0:21:20.37:0,20,138	0/1:12,0:11:3.44:3,0,94	0/1:12,0:11:10.63:11,0,51	1/1:4,4:8:5.59:30,6,0	0/1:11,0:11:6.07:6,0,39	0/1:21,0:20:13.14:13,0,120	1/1:14,0:12:5.87:35,6,0	0/0:5,0:5:3:0,3,26	0/1:10,0:9:1.97:2,0,56	0/1:17,0:10:8.53:9,0,71	0/1:15,0:13:3:3,0,54	0/0:19,0:16:26.67:0,27,190	0/1:30,0:25:17.27:17,0,110	1/1:13,8:19:8.07:45,8,0	1/1:13,0:19:22.73:143,23,0	1/1:19,0:16:29.68:202,30,0	1/1:12,0:10:14.84:101,15,0
chr10	4205726	.	T	TG	582.21	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-5.958;DP=709;FS=6.061;HRun=5;HaplotypeScore=72.4864;InbreedingCoeff=0.9939;MQ=75.60;MQ0=0;MQRankSum=-0.037;QD=21.56;ReadPosRankSum=-5.159;VQSLOD=1.6990;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,129,1376	0/0:8,0:8:21.05:0,21,226	0/0:24,0:24:53.94:0,54,618	0/0:21,0:22:50.12:0,50,503	0/0:18,0:18:42.09:0,42,442	0/0:29,0:29:81.20:0,81,870	0/0:25,0:25:72.13:0,72,754	1/1:6,21:27:54.14:677,54,0	0/0:29,0:29:75.19:0,75,805	0/0:27,0:27:66.16:0,66,710	0/0:20,0:20:57.14:0,57,611	0/0:28,0:28:78.18:0,78,829	0/0:28,0:28:75.19:0,75,806	0/0:35,0:35:96.24:0,96,1030	0/0:29,0:29:81.19:0,81,862	0/0:24,0:24:69.17:0,69,741	0/0:21,0:21:60.15:0,60,643	0/0:24,0:24:63.09:0,63,652	0/0:15,0:15:42.08:0,42,436	0/0:26,0:26:60.14:0,60,645	0/0:47,0:47:99:0,126,1335	0/0:20,0:20:57.14:0,57,612	0/0:20,0:20:57.14:0,57,612	0/0:25,0:25:72.14:0,72,761	0/0:19,0:19:51.13:0,51,548	0/0:40,0:40:99:0,102,1082	0/0:23,0:23:60.13:0,60,636	0/0:9,0:9:24.06:0,24,258
chr10	4211213	.	C	CCCA	179.19	PASS	AB=0.945;AC=7;AF=0.140;AN=50;BaseQRankSum=4.981;DP=586;FS=12.068;HRun=0;HaplotypeScore=68.2890;InbreedingCoeff=0.3035;MQ=68.16;MQ0=75;MQRankSum=1.020;QD=1.91;ReadPosRankSum=-1.343;VQSLOD=-0.4827;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,6:36:51.13:0,51,833	0/0:11,0:5:9.03:0,9,153	0/1:27,2:23:65.21:65,0,934	0/1:33,2:24:99:153,0,755	0/0:32,0:25:9.32:0,9,844	0/0:11,0:9:12.04:0,12,204	0/0:21,0:15:15:0,15,223	./.	0/0:10,0:10:15.02:0,15,220	0/0:31,0:23:25.38:0,25,1052	0/0:18,0:11:27.09:0,27,460	0/0:24,0:19:36.08:0,36,579	0/0:19,1:16:24.08:0,24,409	0/1:20,1:17:19.65:20,0,276	0/0:19,0:18:39.13:0,39,658	0/0:25,0:23:32.62:0,33,499	1/1:5,3:1:2.92:17,3,0	0/0:12,2:9:18.06:0,18,306	0/0:21,0:14:42.12:0,42,649	0/0:23,1:16:41.67:0,42,705	0/0:59,2:39:80.64:0,81,1332	0/0:21,0:17:33.05:0,33,505	0/0:17,0:11:24.08:0,24,408	0/0:33,0:27:30.06:0,30,480	0/0:20,0:14:30.05:0,30,455	./.	./.	1/1:1,0:1:3.01:43,3,0
chr10	4215414	.	GATGCAGGGACCGTGGAGGGGATAAGAGCCA	G	2228.89	PASS	AB=0.786;AC=10;AF=0.179;AN=56;BaseQRankSum=5.558;DP=468;FS=6.887;HRun=0;HaplotypeScore=318.2931;InbreedingCoeff=0.6395;MQ=67.92;MQ0=8;MQRankSum=-8.063;QD=30.96;ReadPosRankSum=-2.494;VQSLOD=0.9984;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:48.15:0,48,2313	0/0:4,0:4:12.04:0,12,607	0/0:29,0:16:40.38:0,40,1638	0/0:21,0:15:29.22:0,29,1066	0/0:7,0:7:18.02:0,18,435	0/0:10,0:10:24.08:0,24,1116	0/0:31,0:31:60.16:0,60,2287	1/1:23,0:22:4.93:439,5,0	0/0:26,0:26:63.19:0,63,2662	0/0:12,0:11:27.09:0,27,1371	0/0:7,0:7:17.95:0,18,736	0/0:22,0:22:42.13:0,42,1932	0/0:9,0:9:24.08:0,24,1243	0/0:22,0:22:51.16:0,51,2563	0/0:22,0:22:51.13:0,51,2365	0/0:15,0:15:42.13:0,42,2071	1/1:16,0:16:39.13:1204,39,0	0/0:24,0:24:63.22:0,63,3260	0/1:19,0:17:66.45:66,0,1405	0/0:9,0:9:15.05:0,15,655	0/0:41,0:41:99:0,106,4225	0/0:8,0:6:9.03:0,9,308	0/0:8,0:7:14.98:0,15,498	0/0:34,0:34:81.23:0,81,4282	0/0:12,0:12:30.10:0,30,1259	0/1:2,6:8:99:247,0,174	1/1:5,0:5:14.75:307,15,0	1/1:1,0:1:3.01:118,3,0
chr10	4216187	.	G	GATGA	2456.97	PASS	AB=0.600;AC=7;AF=0.125;AN=56;BaseQRankSum=-5.843;DP=576;FS=19.635;HRun=0;HaplotypeScore=88.5670;InbreedingCoeff=0.8579;MQ=59.34;MQ0=6;MQRankSum=-2.037;QD=30.33;ReadPosRankSum=1.230;VQSLOD=1.6264;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:22:17.99:263,18,0	0/0:7,0:7:21.07:0,21,336	0/0:24,0:11:9.03:0,9,134	0/0:25,0:14:12.04:0,12,180	0/0:15,0:15:39.13:0,39,631	0/0:24,0:24:54.18:0,54,874	0/0:22,0:22:48.14:0,48,724	0/0:30,0:30:45.15:0,45,726	0/0:20,0:20:48.16:0,48,778	0/0:22,0:22:39.13:0,39,625	0/0:20,0:20:39.13:0,39,632	0/0:14,0:14:33.10:0,33,507	0/0:23,0:23:48.16:0,48,778	0/0:15,0:15:39.12:0,39,609	0/0:27,0:27:63.21:0,63,1012	0/0:19,0:19:33.11:0,33,535	0/0:22,0:22:48.14:0,48,751	0/0:18,0:18:39.09:0,39,580	0/0:20,0:20:39.13:0,39,629	0/0:20,0:20:48.16:0,48,778	0/0:20,0:20:45.15:0,45,730	0/0:24,0:24:60.20:0,60,973	0/0:21,0:21:42.14:0,42,681	0/0:22,0:22:42.14:0,42,681	0/0:21,0:21:45.15:0,45,724	0/1:7,14:20:3.50:967,0,3	1/1:12,15:30:42.14:1009,42,0	1/1:2,5:8:15.05:363,15,0
chr10	4216325	.	GTC	G	2116.37	PASS	AB=0.875;AC=13;AF=0.232;AN=56;BaseQRankSum=11.101;DP=568;FS=1.334;HRun=0;HaplotypeScore=85.4833;InbreedingCoeff=0.8661;MQ=70.52;MQ0=14;MQRankSum=-2.967;QD=14.60;ReadPosRankSum=1.109;VQSLOD=3.5378;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:39.02:0,39,413	0/0:15,0:15:33.32:0,33,440	0/0:36,0:19:39.98:0,40,416	0/0:40,0:23:15.51:0,16,258	0/0:24,0:23:48.52:0,49,743	0/0:25,0:25:56.48:0,56,562	0/0:35,0:35:74.14:0,74,934	1/1:25,0:24:61.35:536,61,0	0/0:15,0:15:44.97:0,45,522	0/0:14,0:14:42.06:0,42,465	0/0:14,0:13:33.89:0,34,396	0/0:12,0:12:22.33:0,22,300	0/0:16,0:15:22.39:0,22,335	0/0:18,0:16:42.05:0,42,569	1/1:16,0:16:11.79:95,12,0	0/0:16,0:16:46.34:0,46,682	1/1:25,1:25:53.88:471,54,0	1/1:20,0:20:51.02:378,51,0	0/0:12,0:12:33.01:0,33,350	0/0:18,0:16:33.73:0,34,406	0/0:18,0:18:39.01:0,39,458	0/0:20,0:20:35.58:0,36,442	0/0:16,0:16:44.16:0,44,518	0/0:24,0:24:49.12:0,49,793	1/1:17,0:16:14.79:104,15,0	0/1:18,3:21:49.75:504,0,50	1/1:4,16:20:20.89:215,21,0	0/0:3,0:3:5.96:0,6,44
chr10	4216326	.	TCTCA	T	2400.18	PASS	AB=0.913;AC=13;AF=0.232;AN=56;BaseQRankSum=9.996;DP=574;FS=3.823;HRun=0;HaplotypeScore=103.0972;InbreedingCoeff=0.8584;MQ=69.49;MQ0=14;MQRankSum=-1.590;QD=16.78;ReadPosRankSum=0.782;VQSLOD=3.0835;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:39.03:0,39,567	0/0:15,0:15:19.20:0,19,699	0/0:36,0:19:39.98:0,40,416	0/0:39,0:22:15.49:0,15,258	0/0:25,0:24:60:0,60,1209	0/0:24,0:24:33.19:0,33,672	0/0:36,0:36:76.14:0,76,1363	1/1:24,0:23:60.94:536,61,0	0/0:15,0:15:45.10:0,45,847	0/0:14,0:14:42.10:0,42,638	0/0:15,0:14:36.04:0,36,619	0/0:13,0:13:30.31:0,30,467	0/0:16,0:15:38.95:0,39,546	0/0:18,0:16:42.06:0,42,830	1/1:0,14:15:11.90:209,12,0	0/0:16,0:16:44.01:0,44,988	1/1:16,7:25:53.82:716,54,0	1/1:18,2:20:46.33:423,46,0	0/0:13,0:13:35.90:0,36,468	0/0:19,0:17:45.05:0,45,683	0/0:22,0:22:23.22:0,23,631	0/0:20,0:20:35.65:0,36,684	0/0:16,0:16:29.66:0,30,697	0/0:24,0:24:43.26:0,43,1183	1/1:3,11:16:14.98:178,15,0	0/1:19,2:21:87.07:428,0,87	1/1:18,0:19:10.61:95,11,0	0/0:2,0:2:6.02:0,6,96
chr10	4216328	.	TCA	T	567.37	PASS	AB=0.930;AC=19;AF=0.380;AN=50;BaseQRankSum=7.246;DP=588;FS=11.197;HRun=0;HaplotypeScore=92.5209;InbreedingCoeff=0.0171;MQ=67.92;MQ0=16;MQRankSum=-2.525;QD=1.87;ReadPosRankSum=1.252;VQSLOD=0.6906;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:34:14.55:0,15,126	0/1:12,1:15:16.98:17,0,233	./.	./.	0/1:26,0:25:6.73:7,0,513	0/0:19,0:24:0.90:0,1,141	0/1:35,1:37:34.83:35,0,468	./.	0/0:16,0:16:24.55:0,25,348	0/0:15,0:15:14.82:0,15,151	0/1:16,0:14:2.30:2,0,208	0/1:11,2:13:17.24:17,0,141	0/1:12,4:15:47.22:47,0,138	0/0:19,0:17:27.04:0,27,356	1/1:15,0:15:11.45:61,11,0	0/0:16,0:16:13.71:0,14,441	1/1:25,0:25:34.87:205,35,0	0/1:21,0:21:7.75:22,0,8	0/0:16,0:16:0.12:0,0,146	0/1:18,3:19:11.58:12,0,224	0/0:19,5:22:6.74:0,7,183	0/0:13,7:20:23.41:0,23,313	0/1:17,0:17:17.25:17,0,221	0/1:19,4:24:34.27:34,0,461	1/1:16,0:15:11.56:73,12,0	0/1:22,0:22:21.23:94,0,21	1/1:18,0:17:14.44:83,14,0	0/0:4,0:4:7.27:0,7,92
chr10	4217053	.	C	CA	1500.29	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-7.189;DP=709;FS=4.886;HRun=3;HaplotypeScore=70.5601;InbreedingCoeff=0.9977;MQ=86.53;MQ0=1;MQRankSum=-2.807;QD=31.26;ReadPosRankSum=2.682;VQSLOD=3.9529;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,47:48:99:1595,114,0	0/0:9,0:9:27.08:0,27,324	0/0:22,0:21:54.12:0,54,610	0/0:36,0:35:92.49:0,92,1015	0/0:22,0:22:60.17:0,60,708	0/0:17,0:17:48.15:0,48,575	0/0:26,0:26:75.20:0,75,877	0/0:28,0:28:72.21:0,72,851	0/0:29,0:29:84.26:0,84,1008	0/0:20,0:20:54.16:0,54,648	0/0:11,0:11:33.09:0,33,385	0/0:28,0:28:75.21:0,75,887	0/0:39,0:39:99:0,117,1378	0/0:21,0:21:63.18:0,63,744	0/0:40,0:38:99:0,111,1318	0/0:24,0:24:72.22:0,72,863	0/0:36,0:36:90.27:0,90,1079	0/0:22,0:22:54.16:0,54,643	0/0:25,0:25:66.17:0,66,754	0/0:16,0:16:48.15:0,48,574	0/0:32,0:32:87.24:0,87,1020	0/0:23,0:23:66.20:0,66,791	0/0:10,0:10:30.09:0,30,354	0/0:40,0:40:96.06:0,96,1289	0/0:21,0:21:57:0,57,662	0/0:29,0:29:84.24:0,84,988	0/0:25,0:25:69.07:0,69,796	0/0:10,0:10:30.09:0,30,360
chr10	4217113	.	TC	T	917.79	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.068;DP=688;FS=29.216;HRun=2;HaplotypeScore=76.6136;InbreedingCoeff=0.9774;MQ=69.01;MQ0=0;MQRankSum=1.146;QD=28.68;ReadPosRankSum=2.512;VQSLOD=1.8763;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:36:87.25:0,87,1258	0/0:13,0:13:39.09:0,39,559	0/0:12,0:10:16.03:0,16,304	0/0:11,0:11:17.47:0,17,277	0/0:22,0:22:63.19:0,63,904	0/0:16,0:16:45.14:0,45,653	0/0:27,0:27:81.27:0,81,1214	0/0:22,0:22:66.21:0,66,951	0/0:33,0:33:99:0,99,1471	0/0:23,0:23:69.22:0,69,1011	0/0:12,0:12:36.12:0,36,537	0/0:29,0:29:87.27:0,87,1264	0/0:42,0:42:99:0,123,1790	0/0:28,0:28:84.26:0,84,1217	0/0:47,0:47:99:0,135,2001	0/0:32,0:32:96.31:0,96,1418	1/1:1,31:32:78.25:1013,78,0	0/0:18,0:18:54.18:0,54,808	0/0:20,0:20:57.18:0,57,854	0/0:23,0:23:63.21:0,63,944	0/0:36,0:35:99:0,102,1479	0/0:17,0:17:42.10:0,42,569	0/0:14,0:14:39.12:0,39,564	0/0:40,0:39:99:0,117,1748	0/0:18,0:18:51.12:0,51,700	0/0:27,0:27:81.27:0,81,1196	0/0:28,0:28:84.28:0,84,1257	0/0:9,0:9:27.09:0,27,404
chr10	4218334	.	G	GCACACACACACACA	4981.25	PASS	AB=0.821;AC=16;AF=0.286;AN=56;BaseQRankSum=0.718;DP=539;FS=44.681;HRun=0;HaplotypeScore=195.0610;InbreedingCoeff=0.6129;MQ=57.12;MQ0=6;MQRankSum=-7.583;QD=25.94;ReadPosRankSum=-1.986;VQSLOD=2.2104;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:3,0:28:45.73:0,46,1652	0/0:10,0:12:21.07:0,21,605	0/0:23,0:6:8.86:0,9,112	0/1:12,0:5:64.06:64,0,86	0/0:24,0:25:62.41:0,62,2182	0/0:17,0:17:23.63:0,24,1243	0/1:24,0:24:15.04:15,0,1487	1/1:28,0:25:42.07:775,42,0	0/0:18,0:18:23.14:0,23,1356	0/0:18,0:18:33.08:0,33,1127	0/0:19,0:19:27.02:0,27,721	0/0:21,0:21:46.29:0,46,1429	0/0:12,0:13:33.11:0,33,1205	0/0:18,0:18:33.06:0,33,880	0/1:4,0:10:5.22:177,0,5	0/0:17,0:18:48:0,48,1482	1/1:18,0:18:17.99:667,18,0	1/1:11,0:25:24.04:461,24,0	0/0:11,0:10:8.35:0,8,610	0/0:20,0:20:45.13:0,45,1469	0/0:22,0:23:57.18:0,57,1970	0/0:17,0:17:36.12:0,36,1428	0/0:16,0:16:34.91:0,35,1088	0/0:27,0:29:51.06:0,51,1691	1/1:5,0:13:8.77:188,9,0	0/1:13,3:27:89.99:867,0,90	1/1:8,3:18:3.95:205,4,0	1/1:3,10:17:24.08:1562,24,0
chr10	4219593	.	TCACACACACACACACA	T	7586.36	PASS	AB=0.664;AC=12;AF=0.214;AN=56;BaseQRankSum=12.136;DP=600;FS=1.006;HRun=0;HaplotypeScore=248.7512;InbreedingCoeff=0.7767;MQ=63.12;MQ0=6;MQRankSum=-12.024;QD=48.63;ReadPosRankSum=2.897;VQSLOD=4.3907;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:31:21.48:0,21,931	0/0:12,0:14:27.09:0,27,1858	0/0:23,0:15:15.05:0,15,572	0/0:30,0:26:33.11:0,33,1009	0/0:16,0:18:45.15:0,45,3111	0/0:20,0:20:46.01:0,46,2963	0/0:21,0:22:45.15:0,45,3058	0/0:17,0:17:21.07:0,21,416	0/0:17,0:19:45.15:0,45,3181	0/0:20,0:25:57.20:0,57,3735	0/0:21,0:20:45.15:0,45,3153	0/0:18,0:19:42.14:0,42,2865	0/0:19,0:19:42.14:0,42,3038	0/0:16,0:16:27.09:0,27,1983	1/1:10,22:32:60.20:2644,60,0	0/0:19,0:22:50.84:0,51,3594	0/1:13,0:22:37.17:268,0,37	1/1:15,9:24:18.06:800,18,0	0/0:10,0:10:21.07:0,21,1576	0/0:16,0:15:24.55:0,25,1813	0/0:27,0:26:45.63:0,46,3218	0/0:21,0:21:42.13:0,42,2659	0/0:15,0:19:34.44:0,34,2427	0/0:30,0:34:78.01:0,78,5512	1/1:4,20:26:48.16:2085,48,0	0/1:8,0:20:70.82:643,0,71	1/1:9,0:22:33.11:790,33,0	1/1:3,0:8:15.05:357,15,0
chr10	4222063	.	TGTGTGC	T	381.17	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.017;DP=799;FS=9.632;HRun=0;HaplotypeScore=205.3584;InbreedingCoeff=0.9985;MQ=75.95;MQ0=0;MQRankSum=-3.315;QD=29.32;ReadPosRankSum=-1.776;VQSLOD=2.1152;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:78.04:0,78,2164	0/0:14,0:14:39.13:0,39,1262	0/0:31,0:29:31.81:0,32,1826	0/0:36,0:35:78.05:0,78,2039	0/0:37,0:37:99:0,99,3141	0/0:22,0:22:63.22:0,63,1947	0/0:28,0:28:78.25:0,78,2353	1/1:8,5:13:27.09:475,27,0	0/0:23,0:23:63.22:0,63,2133	0/0:31,0:31:75.25:0,75,2355	0/0:22,0:22:60.18:0,60,1623	0/0:39,0:39:96.33:0,96,3102	0/0:28,0:28:75.21:0,75,2271	0/0:30,0:30:84.29:0,84,2681	0/0:33,0:33:69.01:0,69,2020	0/0:32,0:32:90.31:0,90,2899	0/0:30,0:30:75.23:0,75,2395	0/0:32,0:32:84.25:0,84,2593	0/0:22,0:22:48.16:0,48,1355	0/0:26,0:26:57.20:0,57,1937	0/0:57,0:57:99:0,135,3935	0/0:21,0:21:54.17:0,54,1542	0/0:23,0:23:63.14:0,63,1684	0/0:43,0:43:99:0,117,3648	0/0:22,0:22:54.19:0,54,1656	0/0:27,0:27:60.21:0,60,1665	0/0:23,0:23:57.18:0,57,1482	0/0:14,0:14:42.14:0,42,1353
chr10	4222090	.	GT	G	6870.19	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=11.681;DP=831;FS=3.103;HRun=2;HaplotypeScore=126.8423;InbreedingCoeff=1.0000;MQ=62.83;MQ0=8;MQRankSum=-2.464;QD=28.99;ReadPosRankSum=1.516;VQSLOD=4.5122;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,40:40:84.17:1090,84,0	0/0:12,0:12:36.12:0,36,537	0/0:46,0:28:69.35:0,69,957	0/0:54,0:29:72.45:0,72,912	0/0:34,0:34:87.28:0,87,1283	0/0:21,0:21:63.21:0,63,939	0/0:27,0:27:78.22:0,78,1144	1/1:3,13:16:43.51:485,44,0	0/0:28,0:28:79.16:0,79,1107	0/0:27,0:27:75.25:0,75,1113	0/0:22,0:22:63.11:0,63,872	0/0:33,0:33:90.29:0,90,1325	0/0:38,0:38:93.31:0,93,1539	0/0:35,0:35:99:0,101,1463	1/1:3,27:30:47.95:591,48,0	0/0:32,0:32:93.30:0,93,1356	1/1:1,36:37:87.28:1129,87,0	1/1:0,28:28:75.24:973,75,0	0/0:19,0:19:54.13:0,54,765	0/0:24,0:24:72.19:0,72,1029	0/0:61,0:61:99:0,141,2053	0/0:21,0:21:54.16:0,54,786	0/0:20,0:20:54.12:0,54,809	0/0:40,0:40:99:0,120,1754	1/1:3,23:26:41.15:510,41,0	1/1:0,22:22:66.21:856,66,0	1/1:2,20:22:47.92:613,48,0	1/1:0,16:16:48.16:623,48,0
chr10	4222100	.	A	AGT	2673.59	PASS	AB=0.858;AC=15;AF=0.278;AN=54;BaseQRankSum=2.483;DP=864;FS=17.881;HRun=0;HaplotypeScore=165.0966;InbreedingCoeff=0.5718;MQ=59.03;MQ0=9;MQRankSum=-3.109;QD=8.18;ReadPosRankSum=-0.371;VQSLOD=2.2962;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:43:52.27:0,52,575	0/0:11,0:13:20.89:0,21,217	./.	0/1:55,0:21:0:0,0,0	0/0:28,0:34:45.98:0,46,412	0/0:20,0:20:23.28:0,23,244	0/0:40,0:44:76:0,76,793	1/1:22,0:22:1.65:37,2,0	0/0:23,0:25:44.26:0,44,443	0/0:22,0:24:21.09:0,21,195	0/0:17,0:21:20.39:0,20,177	1/1:16,17:33:34.66:563,35,0	0/0:39,1:43:6.36:0,6,529	0/0:32,0:40:68.30:0,68,653	1/1:18,9:27:24.06:335,24,0	0/0:25,0:28:47.61:0,48,465	0/0:40,0:44:58.88:0,59,634	0/1:23,6:29:0.72:396,0,1	0/0:21,0:20:8.91:0,9,95	0/0:17,0:21:29.41:0,29,257	1/1:28,6:71:32.32:606,32,0	0/0:20,0:21:35.92:0,36,377	0/0:20,0:20:36.06:0,36,389	0/0:37,1:40:9.97:0,10,491	1/1:13,9:23:18.03:223,18,0	0/1:22,4:27:99:216,0,147	0/1:14,5:20:23.79:250,0,24	0/1:14,5:19:43.51:220,0,44
chr10	4222402	.	T	TAATG	1398.38	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-6.230;DP=535;FS=0.000;HRun=0;HaplotypeScore=84.3445;InbreedingCoeff=0.9774;MQ=72.76;MQ0=0;MQRankSum=1.484;QD=45.11;ReadPosRankSum=-4.128;VQSLOD=3.0248;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:57.18:0,57,948	0/0:8,0:8:24.07:0,24,382	0/0:15,0:15:36.12:0,36,522	0/0:9,0:9:17.85:0,18,200	0/0:37,0:37:99:0,99,1618	0/0:28,0:28:72.24:0,72,1214	0/0:14,0:14:36.12:0,36,607	1/1:10,21:31:69.23:1493,69,0	0/0:15,0:15:45.14:0,45,724	0/0:24,0:24:66.22:0,66,1095	0/0:25,0:25:72.24:0,72,1218	0/0:17,0:17:48.14:0,48,749	0/0:12,0:12:27.09:0,27,433	0/0:14,0:14:39.12:0,39,645	0/0:9,0:9:21.07:0,21,371	0/0:9,0:9:24.08:0,24,395	0/0:34,0:34:96.31:0,96,1614	0/0:23,0:23:69.23:0,69,1153	0/0:19,0:19:51.17:0,51,830	0/0:19,0:19:57.18:0,57,962	0/0:8,0:8:21.07:0,21,328	0/0:19,0:19:51.17:0,51,872	0/0:25,0:25:66.22:0,66,1056	0/0:12,0:12:27.07:0,27,434	0/0:28,0:27:75.22:0,75,1238	0/0:28,0:28:72.22:0,72,1171	0/0:20,0:20:51.13:0,51,797	0/0:11,0:11:33.09:0,33,553
chr10	4223132	.	A	ATCTCCCCACC	24356.14	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-4.516;DP=641;FS=4.420;HRun=0;HaplotypeScore=176.0701;InbreedingCoeff=0.9974;MQ=78.20;MQ0=0;MQRankSum=-18.371;QD=116.54;ReadPosRankSum=-1.709;VQSLOD=4.9960;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,16:39:87.30:4094,87,0	0/0:13,0:13:36.12:0,36,1177	0/0:19,0:19:47.36:0,47,1322	0/0:16,0:16:35.89:0,36,853	0/0:20,0:20:57.20:0,57,1821	0/0:17,0:17:51.18:0,51,1673	0/0:28,0:28:75.24:0,75,2361	1/1:14,11:25:72.25:3432,72,0	0/0:30,0:30:84.27:0,84,2617	0/0:24,0:24:66.23:0,66,2169	0/0:19,0:19:57.18:0,57,1753	0/0:22,0:22:66.21:0,66,2102	0/0:24,0:24:72.25:0,72,2373	0/0:25,0:25:75.24:0,75,2307	1/1:4,12:20:45.11:2071,45,0	0/0:14,0:14:42.14:0,42,1358	1/1:10,9:22:42.14:2177,42,0	1/1:4,6:12:30.10:1545,30,0	0/0:26,0:26:75.26:0,75,2441	0/0:20,0:20:54.17:0,54,1698	0/0:34,0:34:99:0,99,3022	0/0:31,0:31:90.30:0,90,2813	0/0:18,0:18:51.16:0,51,1558	0/0:32,0:32:84.29:0,84,2693	1/1:12,7:22:44.91:2035,45,0	1/1:14,14:30:87.30:3844,87,0	1/1:6,23:34:87.30:4370,87,0	1/1:3,2:5:15.05:788,15,0
chr10	4224048	.	GA	G	1900.38	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=10.994;DP=646;FS=11.691;HRun=3;HaplotypeScore=66.4846;InbreedingCoeff=0.9989;MQ=88.13;MQ0=0;MQRankSum=-3.262;QD=30.16;ReadPosRankSum=2.376;VQSLOD=2.5872;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,153,2068	0/0:10,0:10:27.06:0,27,367	0/0:25,0:25:51.92:0,52,837	0/0:21,0:21:56.90:0,57,710	0/0:27,0:27:81.25:0,81,1123	0/0:23,0:23:69.19:0,69,923	0/0:17,0:17:51.16:0,51,716	0/0:19,0:19:57.15:0,57,739	0/0:26,0:26:78.22:0,78,1099	0/0:19,0:19:54.15:0,54,694	0/0:23,0:23:63.18:0,63,867	0/0:17,0:17:51.16:0,51,716	0/0:23,0:23:69.23:0,69,990	0/0:21,0:21:63.20:0,63,888	1/1:0,26:26:74.89:929,75,0	0/0:17,0:17:51.11:0,51,676	0/0:33,0:33:96.27:0,96,1321	1/1:0,15:15:42.13:520,42,0	0/0:19,0:19:57.17:0,57,781	0/0:28,0:28:75.20:0,75,1005	0/0:43,0:43:99:0,126,1771	0/0:19,0:19:54.15:0,54,720	0/0:17,0:17:45.15:0,45,647	0/0:20,0:20:60.18:0,60,844	1/1:0,22:22:48.15:595,48,0	0/0:30,0:30:81.24:0,81,1104	0/0:25,0:25:69.23:0,69,993	0/0:8,0:8:24.08:0,24,345
chr10	4224635	.	A	AT	332.72	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-3.386;DP=327;FS=13.323;HRun=1;HaplotypeScore=44.5398;InbreedingCoeff=0.8153;MQ=80.03;MQ0=0;MQRankSum=1.841;QD=11.47;ReadPosRankSum=-0.152;VQSLOD=0.1456;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:68.82:0,69,562	0/0:2,0:2:2.99:0,3,24	0/0:13,0:11:26.94:0,27,246	0/0:13,0:10:23.92:0,24,198	0/0:7,0:7:20.90:0,21,161	0/0:8,0:8:20.98:0,21,175	0/0:18,0:18:41.81:0,42,341	0/0:7,0:7:14.91:0,15,122	0/0:12,0:12:24.43:0,24,196	0/0:14,0:14:38.87:0,39,336	0/0:8,0:8:17.92:0,18,142	0/0:15,0:15:38.91:0,39,318	0/0:3,0:3:5.95:0,6,50	0/0:12,0:12:20.76:0,21,148	0/0:8,0:9:14:0,14,69	0/0:9,0:9:17.88:0,18,146	0/0:30,0:30:81.13:0,81,482	0/0:20,0:20:22.75:0,23,115	0/0:12,0:12:33:0,33,294	0/0:7,0:7:17.51:0,18,146	0/0:21,0:21:41.91:0,42,346	0/0:7,0:7:20.77:0,21,149	0/0:4,0:4:9:0,9,79	0/0:7,0:7:17.85:0,18,137	0/0:13,0:13:18.88:0,19,109	1/1:12,0:12:29.66:257,30,0	1/1:0,12:11:5.97:67,6,0	1/1:5,0:5:14.97:140,15,0
chr10	4224638	.	C	CCCCT	724.97	PASS	AB=0.913;AC=5;AF=0.089;AN=56;BaseQRankSum=1.877;DP=339;FS=11.984;HRun=0;HaplotypeScore=72.3423;InbreedingCoeff=0.5432;MQ=75.36;MQ0=0;MQRankSum=-1.545;QD=14.50;ReadPosRankSum=3.815;VQSLOD=2.1253;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:59.96:0,60,542	0/0:3,0:2:2.86:0,3,26	0/0:12,0:10:14.71:0,15,133	0/0:12,0:7:8.98:0,9,83	0/0:7,0:7:14.99:0,15,126	0/0:7,0:7:15.02:0,15,157	0/0:22,0:22:50.47:0,50,455	0/0:7,0:7:11.97:0,12,105	0/0:11,0:11:17.89:0,18,159	0/0:15,0:15:35.93:0,36,311	0/0:8,0:8:14.90:0,15,120	0/0:14,0:14:31.56:0,32,267	0/0:4,0:4:5.91:0,6,52	0/0:12,0:12:20.47:0,20,164	1/1:14,0:14:16.42:242,16,0	0/0:11,0:10:17.84:0,18,152	0/0:31,0:31:67.16:0,67,434	0/1:19,2:21:31.77:297,0,32	0/0:13,0:13:26.96:0,27,253	0/0:9,0:9:18.79:0,19,154	0/0:23,0:23:43.07:0,43,367	0/0:8,0:8:20.88:0,21,162	0/0:5,0:5:6.47:0,6,52	0/0:6,0:6:11.71:0,12,104	1/1:7,8:14:15.02:309,15,0	0/0:12,0:12:29.34:0,29,235	0/0:10,0:9:3.58:0,4,28	0/0:3,0:3:8.37:0,8,59
chr10	4224639	.	C	CCCT	560.92	PASS	AB=0.618;AC=5;AF=0.089;AN=56;BaseQRankSum=3.925;DP=342;FS=11.661;HRun=0;HaplotypeScore=69.3180;InbreedingCoeff=0.4915;MQ=72.65;MQ0=0;MQRankSum=-2.031;QD=11.45;ReadPosRankSum=4.882;VQSLOD=1.7071;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:59.96:0,60,534	0/0:3,0:2:3:0,3,26	0/0:10,0:8:14.34:0,14,127	0/0:12,0:7:8.98:0,9,83	0/0:7,0:7:14.99:0,15,126	0/0:8,0:8:10.85:0,11,139	0/0:22,0:22:50.77:0,51,451	0/0:8,0:8:11.97:0,12,105	0/0:11,0:11:17.95:0,18,159	0/0:17,0:17:38.92:0,39,337	0/0:8,0:8:15.42:0,15,121	0/0:15,0:15:32.48:0,32,272	0/0:4,0:4:5.91:0,6,52	0/0:12,0:12:20.70:0,21,166	1/1:13,1:14:5.55:138,6,0	0/0:11,0:10:17.82:0,18,152	0/0:29,0:29:64.80:0,65,357	0/1:8,12:21:25.95:301,0,26	0/0:13,0:13:26.97:0,27,246	0/0:9,0:9:19.24:0,19,156	0/0:25,0:25:44.78:0,45,371	0/0:8,0:8:20.88:0,21,162	0/0:5,0:5:5.95:0,6,52	0/0:6,0:6:12:0,12,104	1/1:12,2:13:15.02:238,15,0	0/0:12,0:12:29.34:0,29,235	0/0:10,0:9:3.63:0,4,28	0/0:4,0:4:8.37:0,8,59
chr10	4225342	.	AAATACATACG	A	1184.32	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.628;DP=702;FS=6.366;HRun=0;HaplotypeScore=212.1563;InbreedingCoeff=0.9405;MQ=87.61;MQ0=0;MQRankSum=-1.190;QD=33.84;ReadPosRankSum=-3.084;VQSLOD=2.4010;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:75.26:0,75,3616	0/0:18,0:18:42.14:0,42,1974	0/0:27,0:27:51.65:0,52,2021	0/0:23,0:23:54.19:0,54,2229	0/0:24,0:24:66.23:0,66,3027	0/0:32,0:32:87.30:0,87,4256	0/0:13,0:13:36.12:0,36,1720	1/1:17,18:35:54.15:1279,54,0	0/0:24,0:24:57.20:0,57,2879	0/0:45,0:45:96.31:0,96,4533	0/0:23,0:23:54.19:0,54,2600	0/0:18,0:18:39.13:0,39,1875	0/0:21,0:21:48.15:0,48,2084	0/0:24,0:24:51.18:0,51,2485	0/0:31,0:31:78.25:0,78,3675	0/0:20,0:19:48.16:0,48,2240	0/0:7,0:7:21.07:0,21,1074	0/0:28,0:28:63.22:0,63,3094	0/0:19,0:19:27.09:0,27,1126	0/0:33,0:33:84.29:0,84,3891	0/0:39,0:39:99:0,117,5497	0/0:30,0:30:72.25:0,72,3520	0/0:27,0:27:78.25:0,78,3645	0/0:15,0:15:39.13:0,39,1880	0/0:26,0:26:72.23:0,72,3227	0/0:35,0:35:81.28:0,81,4074	0/0:31,0:30:84.29:0,84,4021	0/0:3,0:3:9.03:0,9,427
chr10	4225701	.	AG	A	449.46	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.461;DP=573;FS=0.000;HRun=1;HaplotypeScore=58.5277;InbreedingCoeff=0.9966;MQ=88.05;MQ0=0;MQRankSum=-5.704;QD=28.09;ReadPosRankSum=-0.896;VQSLOD=3.0606;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:90.31:0,90,1437	0/0:9,0:9:24.08:0,24,384	0/0:16,0:16:42.14:0,42,670	0/0:25,0:25:66.18:0,66,959	0/0:25,0:25:75.24:0,75,1174	0/0:19,0:18:57.15:0,57,840	0/0:14,0:14:42.14:0,42,671	1/1:2,14:16:42.14:544,42,0	0/0:21,0:21:63.21:0,63,1004	0/0:30,0:30:90.30:0,90,1410	0/0:11,0:11:33.10:0,33,505	0/0:16,0:16:48.15:0,48,744	0/0:21,0:21:63.21:0,63,1003	0/0:25,0:25:75.26:0,75,1196	0/0:29,0:29:84.29:0,84,1342	0/0:22,0:22:66.20:0,66,1030	0/0:20,0:20:60.20:0,60,959	0/0:16,0:16:48.16:0,48,767	0/0:25,0:25:72.25:0,72,1147	0/0:20,0:20:60.20:0,60,959	0/0:24,0:24:72.22:0,72,1098	0/0:21,0:21:63.21:0,63,996	0/0:16,0:16:48.13:0,48,715	0/0:18,0:18:54.18:0,54,863	0/0:9,0:9:27.09:0,27,431	0/0:26,0:26:75.23:0,75,1154	0/0:26,0:26:75.26:0,75,1189	0/0:22,0:22:66.23:0,66,1055
chr10	4225754	.	T	TCTTC	2295.31	PASS	AC=16;AF=0.320;AN=50;BaseQRankSum=-3.363;DP=626;FS=0.641;HRun=0;HaplotypeScore=99.5323;InbreedingCoeff=0.9150;MQ=69.84;MQ0=2;MQRankSum=-3.309;QD=12.97;ReadPosRankSum=-1.298;VQSLOD=2.7439;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:27:3.01:52,3,0	0/0:12,0:12:18.02:0,18,231	./.	./.	0/0:25,0:25:25.31:0,25,386	0/0:22,0:22:27.07:0,27,391	0/0:23,0:23:21.06:0,21,300	./.	0/0:30,0:29:57.17:0,57,820	0/0:27,0:28:33.10:0,33,462	0/0:19,0:19:27.03:0,27,327	0/0:24,0:24:36.12:0,36,553	0/0:24,0:24:39.13:0,39,594	0/0:20,0:20:21.07:0,21,314	1/1:21,0:32:6.02:91,6,0	0/0:22,0:22:27.08:0,27,393	1/1:10,11:21:18.06:420,18,0	1/1:10,1:15:6:76,6,0	0/0:21,0:20:24.08:0,24,368	0/0:27,0:27:39.03:0,39,535	0/0:35,0:35:60.19:0,60,892	0/0:24,0:24:15.05:0,15,226	0/0:20,0:19:20.97:0,21,321	0/0:21,0:21:46.69:0,47,663	1/1:8,0:8:15:165,15,0	1/1:16,10:25:21.07:491,21,0	1/1:10,13:25:36.12:834,36,0	1/1:17,4:22:15.05:350,15,0
chr10	4226253	.	CTAACAGTTATAGGA	C	425.50	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.268;DP=627;FS=2.014;HRun=0;HaplotypeScore=236.6770;InbreedingCoeff=0.9644;MQ=86.10;MQ0=0;MQRankSum=-3.408;QD=42.55;ReadPosRankSum=0.761;VQSLOD=2.8654;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:69.24:0,69,4587	0/0:9,0:9:27.09:0,27,1467	0/0:23,0:23:66.23:0,66,4020	0/0:18,0:18:51.18:0,51,3261	0/0:32,0:32:96.30:0,96,5863	0/0:21,0:21:60.21:0,60,3949	0/0:18,0:18:54.19:0,54,3500	0/0:37,0:37:99:0,102,6475	0/0:17,0:17:48.16:0,48,3348	0/0:19,0:19:57.20:0,57,3810	0/0:27,0:27:81.28:0,81,5249	0/0:21,0:21:63.22:0,63,4110	0/0:29,0:29:84.27:0,84,4995	0/0:20,0:20:54.19:0,54,3819	0/0:21,0:21:60.21:0,60,3684	0/0:23,0:23:69.24:0,69,4574	1/1:4,6:10:11.88:511,12,0	0/0:19,0:19:54.16:0,54,2722	0/0:25,0:25:75.26:0,75,4681	0/0:40,0:40:99:0,120,7929	0/0:27,0:27:81.28:0,81,5104	0/0:19,0:19:54.19:0,54,3381	0/0:23,0:23:69.22:0,69,4542	0/0:23,0:23:66.23:0,66,4331	0/0:22,0:22:63.22:0,63,3779	0/0:27,0:27:81.28:0,81,5575	0/0:26,0:26:78.24:0,78,4890	0/0:8,0:8:24.08:0,24,1695
chr10	4226738	.	TA	T	1559.31	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.683;DP=589;FS=7.553;HRun=9;HaplotypeScore=67.1727;InbreedingCoeff=0.9980;MQ=78.56;MQ0=0;MQRankSum=-1.732;QD=22.93;ReadPosRankSum=3.910;VQSLOD=4.4739;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:84.20:0,84,945	0/0:13,0:13:36.11:0,36,415	0/0:13,0:13:32.75:0,33,335	0/0:14,0:15:30.29:0,30,277	0/0:20,0:20:54.13:0,54,609	0/0:23,0:23:69.21:0,69,796	0/0:12,0:12:33.10:0,33,381	0/0:26,0:27:45.13:0,45,512	0/0:20,0:20:54.14:0,54,604	0/0:27,0:27:66.18:0,66,752	0/0:19,0:18:55.05:0,55,625	0/0:27,0:27:78.22:0,78,891	0/0:16,0:16:42.12:0,42,485	0/0:14,0:14:42.12:0,42,485	0/0:24,0:24:72.20:0,72,823	0/0:28,0:27:78.23:0,78,900	0/0:28,0:28:69.18:0,69,783	0/0:30,0:30:75.19:0,75,845	0/0:19,0:19:54.16:0,54,617	0/0:19,0:19:54.15:0,54,613	0/0:8,0:8:21.06:0,21,242	0/0:27,0:27:69.21:0,69,796	0/0:17,0:17:39.10:0,39,441	0/0:20,0:20:57.13:0,57,643	0/0:23,0:23:63.18:0,63,719	1/1:0,21:21:63.03:577,63,0	1/1:5,30:35:90.05:824,90,0	1/1:0,12:12:33.02:302,33,0
chr10	4226983	.	CTG	C	278.88	PASS	AB=0.906;AC=15;AF=0.300;AN=50;BaseQRankSum=4.044;DP=603;FS=3.479;HRun=0;HaplotypeScore=79.5666;InbreedingCoeff=0.1321;MQ=62.86;MQ0=8;MQRankSum=-1.077;QD=1.24;ReadPosRankSum=2.782;VQSLOD=1.4439;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:30:7.09:43,7,0	0/0:12,0:12:9.01:0,9,95	./.	./.	0/0:26,0:25:3:0,3,28	0/0:27,0:27:13.62:0,14,232	0/1:26,2:28:50.26:50,0,151	./.	0/1:20,2:22:17.73:18,0,97	0/0:20,0:19:11.21:0,11,104	0/0:12,0:12:5.21:0,5,30	0/0:19,0:19:11.86:0,12,114	0/1:15,0:16:22.75:23,0,38	0/0:14,0:14:3.01:0,3,44	0/0:26,0:27:27.43:0,27,267	0/1:15,2:17:20.16:20,0,80	1/1:19,0:22:2.84:14,3,0	0/0:24,0:24:18.51:0,19,215	0/0:14,0:14:3.01:0,3,44	0/1:19,0:19:7.76:8,0,129	0/0:53,0:51:4.97:0,5,99	0/0:11,0:11:5.05:0,5,49	0/1:23,2:24:17.21:17,0,95	0/0:21,0:21:21.07:0,21,301	0/0:17,0:17:18.02:0,18,187	1/1:19,0:20:2.84:14,3,0	1/1:11,3:15:14.61:142,15,0	0/1:7,2:11:5.28:78,0,5
chr10	4227081	.	T	TA	3668.69	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-10.258;DP=592;FS=4.570;HRun=2;HaplotypeScore=60.4287;InbreedingCoeff=0.9995;MQ=84.38;MQ0=0;MQRankSum=-1.617;QD=37.44;ReadPosRankSum=3.561;VQSLOD=4.3660;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,40:40:99:1553,108,0	0/0:9,0:9:27.08:0,27,324	0/0:22,0:22:62.76:0,63,723	0/0:29,0:29:61.78:0,62,761	0/0:21,0:21:63.20:0,63,780	0/0:23,0:23:63.20:0,63,780	0/0:19,0:19:54.16:0,54,656	0/0:39,0:39:99:0,111,1353	0/0:20,0:20:60.18:0,60,731	0/0:17,0:17:48.14:0,48,586	0/0:16,0:16:45.12:0,45,544	0/0:19,0:19:51.15:0,51,620	0/0:13,0:13:39.11:0,39,473	0/0:15,0:15:45.12:0,45,542	1/1:2,16:18:45.15:648,45,0	0/0:13,0:13:33.09:0,33,396	0/0:30,0:30:87.22:0,87,1045	1/1:0,16:15:36.12:518,36,0	0/0:20,0:19:57.18:0,57,706	0/0:15,0:15:42.13:0,42,520	0/0:25,0:25:66.04:0,66,816	0/0:30,0:30:87.27:0,87,1078	0/0:18,0:18:54.15:0,54,645	0/0:12,0:12:36.10:0,36,433	1/1:1,23:24:66.22:950,66,0	0/0:23,0:23:66.21:0,66,815	0/0:27,0:27:81.25:0,81,1000	0/0:19,0:19:57.18:0,57,704
chr10	4227736	.	CTTTTTCTTTTTTTTTT	C	702.06	PASS	AB=0.816;AC=7;AF=0.125;AN=56;BaseQRankSum=-0.515;DP=372;FS=15.364;HRun=0;HaplotypeScore=146.1169;InbreedingCoeff=0.4542;MQ=52.08;MQ0=22;MQRankSum=0.990;QD=10.97;ReadPosRankSum=0.109;VQSLOD=1.9319;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:19,0:22:0.38:335,0,0	0/0:5,0:5:11.28:0,11,188	0/1:7,0:5:2.57:3,0,53	0/0:14,0:5:2.16:0,2,57	0/0:22,0:20:29.99:0,30,817	0/0:10,0:9:24.03:0,24,1100	0/0:10,0:8:21.03:0,21,692	0/0:16,0:13:36.05:0,36,608	0/0:13,0:13:27.05:0,27,738	0/0:28,0:25:60.11:0,60,1448	0/0:12,0:12:30.02:0,30,790	0/0:10,0:10:1.30:0,1,836	0/0:6,0:5:8.96:0,9,194	0/0:2,0:1:3.01:0,3,54	1/1:8,0:8:20.93:191,21,0	0/0:8,0:8:18.03:0,18,697	0/0:24,0:23:63.12:0,63,2100	0/1:4,13:15:66.41:147,0,66	0/0:24,0:18:53.11:0,53,1787	0/0:20,0:19:45.06:0,45,1070	0/0:1,0:1:3.01:0,3,197	0/0:4,0:3:6.01:0,6,192	0/0:15,0:14:32.79:0,33,818	0/0:7,0:6:15.03:0,15,889	1/1:10,0:10:14.78:159,15,0	0/0:23,0:22:63.09:0,63,1445	0/0:19,0:19:44.96:0,45,1398	0/0:14,0:14:39.10:0,39,1645
chr10	4227772	.	C	CT	285	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-0.480;DP=343;FS=1.150;HRun=8;HaplotypeScore=49.0692;InbreedingCoeff=0.5909;MQ=41.87;MQ0=46;MQRankSum=-2.963;QD=7.13;ReadPosRankSum=0.907;VQSLOD=0.1332;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:17:21:0,21,190	0/0:7,0:6:14.84:0,15,121	0/0:15,0:2:3:0,3,26	0/0:19,0:2:6:0,6,53	0/0:22,0:19:38.97:0,39,357	0/0:13,0:12:14.94:0,15,137	0/0:8,0:7:8.81:0,9,82	0/0:16,0:13:23.91:0,24,203	0/0:9,0:8:14.91:0,15,137	0/0:18,0:17:26.70:0,27,239	0/0:10,0:10:14.98:0,15,137	0/0:8,0:7:8.14:0,8,81	0/0:5,0:5:9:0,9,82	0/0:4,0:4:6:0,6,55	0/0:10,0:8:15.01:0,15,137	0/0:12,0:10:17.86:0,18,156	0/0:22,0:18:19.53:0,20,190	0/0:19,0:15:8.67:0,9,79	0/0:13,0:12:11:0,11,109	0/0:11,0:9:9:0,9,82	0/0:6,0:4:8.99:0,9,77	0/0:3,0:2:3:0,3,27	0/0:8,0:6:6:0,6,55	0/0:12,0:11:11.44:0,11,109	0/0:10,0:10:24.01:0,24,218	1/1:6,9:13:10.36:261,10,0	1/1:5,6:11:10.74:108,11,0	1/1:13,1:8:3.89:37,4,0
chr10	4228178	.	AGCAGTCAGTGCTCTTAACCACTGAGCCATCTCACCAGCCC	A	1876.88	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=4.753;DP=542;FS=1.415;HRun=0;HaplotypeScore=384.7963;InbreedingCoeff=0.6097;MQ=44.00;MQ0=47;MQRankSum=-3.903;QD=56.88;ReadPosRankSum=2.838;VQSLOD=1.0505;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:3,10:10:3.01:305,3,0	0/0:11,0:11:26.93:0,27,3107	0/0:2,0:1:3.01:0,3,288	0/0:3,0:2:6.02:0,6,581	0/0:26,0:25:47.87:0,48,6586	0/0:20,0:18:32.96:0,33,4024	0/0:35,0:28:65.66:0,66,4409	0/0:21,0:12:27.02:0,27,1546	0/0:29,0:28:66.06:0,66,7975	0/0:14,0:13:36.12:0,36,4249	0/0:22,0:21:38.98:0,39,5622	0/0:14,0:13:33.03:0,33,3024	0/0:25,0:25:63.04:0,63,7103	0/0:13,0:12:33.11:0,33,4107	1/1:0,8:8:9.03:916,9,0	0/0:26,0:23:63.02:0,63,8082	0/0:26,0:23:54.18:0,54,8022	0/1:9,0:5:49.82:561,0,50	0/0:31,0:22:53.65:0,54,5246	0/0:17,0:17:38.77:0,39,3842	0/0:47,0:41:77.55:0,78,10082	0/0:24,0:21:60.14:0,60,8254	0/0:16,0:15:29.79:0,30,3067	0/0:30,0:28:60.08:0,60,7445	1/1:3,0:1:3.01:217,3,0	0/0:24,0:21:57.20:0,57,5748	0/0:22,0:19:47.88:0,48,3262	0/0:11,0:8:24.08:0,24,3966
chr10	4228204	.	C	CTACA	350.20	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=4.846;DP=560;FS=1.444;HRun=0;HaplotypeScore=92.8140;InbreedingCoeff=0.8521;MQ=53.09;MQ0=17;MQRankSum=-4.232;QD=14.01;ReadPosRankSum=0.392;VQSLOD=3.4078;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,0:10:3.01:74,3,0	0/0:7,0:7:21.07:0,21,440	0/0:16,0:13:36.12:0,36,740	0/0:19,0:18:48.10:0,48,1002	0/0:21,0:21:45.15:0,45,944	0/0:17,0:16:33.10:0,33,653	0/0:33,0:31:72.08:0,72,1338	0/0:27,0:24:72.25:0,72,1497	0/0:31,0:30:78.14:0,78,1507	0/0:17,0:16:44.89:0,45,892	0/0:18,0:18:36.12:0,36,755	0/0:16,0:15:32.96:0,33,692	0/0:24,0:24:63.13:0,63,1235	0/0:21,0:21:63.13:0,63,1235	1/1:8,0:8:8.89:61,9,0	0/0:27,0:26:75.13:0,75,1444	0/0:31,0:29:66.23:0,66,1382	1/1:3,3:3:9.03:260,9,0	0/0:30,0:23:63.22:0,63,1287	0/0:14,0:14:33.11:0,33,691	0/0:47,0:44:99:0,102,2138	0/0:23,0:23:60.16:0,60,1215	0/0:13,0:13:18.06:0,18,378	0/0:36,0:34:75.26:0,75,1557	1/1:0,1:1:3.01:86,3,0	0/0:21,0:21:63.22:0,63,1292	0/0:17,0:17:41.93:0,42,637	0/0:9,0:8:24.08:0,24,503
chr10	4228344	.	AC	A	2253.37	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=10.634;DP=675;FS=5.067;HRun=5;HaplotypeScore=69.7742;InbreedingCoeff=0.9988;MQ=86.99;MQ0=0;MQRankSum=-3.210;QD=26.83;ReadPosRankSum=2.935;VQSLOD=3.6842;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,24:27:60.17:680,60,0	0/0:10,0:10:24.08:0,24,328	0/0:24,0:24:66.16:0,66,839	0/0:24,0:24:48.09:0,48,573	0/0:18,0:18:51.14:0,51,665	0/0:21,0:21:51.17:0,51,697	0/0:27,0:27:75.24:0,75,1007	0/0:31,0:31:81.26:0,81,1093	0/0:28,0:28:75.24:0,75,1009	0/0:24,0:24:69.23:0,69,940	0/0:13,0:13:39.13:0,39,531	0/0:30,0:30:75.23:0,75,1004	0/0:33,0:33:81.27:0,81,1103	0/0:25,0:25:69.20:0,69,898	1/1:0,33:33:87.25:985,87,0	0/0:31,0:31:84.28:0,84,1148	0/0:33,0:33:96.28:0,96,1276	1/1:1,9:10:24.07:272,24,0	0/0:21,0:21:48.15:0,48,643	0/0:13,0:13:39.13:0,39,533	0/0:29,0:29:81.27:0,81,1107	0/0:21,0:20:48.13:0,48,656	0/0:23,0:23:54.18:0,54,734	0/0:30,0:30:81.24:0,81,1069	1/1:0,14:14:42.12:476,42,0	0/0:26,0:26:75.25:0,75,1025	0/0:35,0:34:90.27:0,90,1229	0/0:21,0:21:57.19:0,57,776
chr10	4229398	.	GGCCCTATGGCCACTCCACGGTT	G	2965.47	PASS	AB=1.000;AC=7;AF=0.130;AN=54;BaseQRankSum=7.129;DP=330;FS=19.717;HRun=0;HaplotypeScore=181.4350;InbreedingCoeff=0.7361;MQ=70.14;MQ0=1;MQRankSum=-5.011;QD=53.92;ReadPosRankSum=2.860;VQSLOD=1.8418;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,11:15:12.04:668,12,0	0/0:3,0:3:9.03:0,9,773	0/1:12,0:4:26.65:27,0,313	0/0:18,0:13:0.78:0,1,1193	0/0:12,0:12:36.12:0,36,3805	0/0:21,0:21:63.22:0,63,5731	0/0:16,0:16:39.13:0,39,3887	0/0:15,0:15:24.08:0,24,1846	0/0:10,0:10:30.10:0,30,3178	0/0:12,0:12:33.11:0,33,2912	0/0:15,0:15:42.14:0,42,3280	0/0:13,0:13:36.12:0,36,3546	0/0:6,0:6:18.06:0,18,1889	0/0:11,0:11:33.11:0,33,3017	1/1:3,12:15:24.08:1484,24,0	0/0:11,0:11:33.11:0,33,3212	0/0:16,0:16:42.14:0,42,4344	./.	0/0:10,0:10:30.10:0,30,2131	0/0:13,0:13:30.10:0,30,2620	0/0:10,0:10:30.10:0,30,2726	0/0:13,0:13:36.12:0,36,3343	0/0:9,0:9:27.09:0,27,2254	0/0:12,0:12:30.10:0,30,2351	1/1:3,10:13:15.05:928,15,0	0/0:7,0:7:21.07:0,21,2073	0/0:13,0:12:36.12:0,36,3619	0/0:6,0:6:18.06:0,18,1891
chr10	4230239	.	T	TAC	2939.30	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=8.160;DP=794;FS=0.993;HRun=0;HaplotypeScore=99.7587;InbreedingCoeff=0.9905;MQ=62.55;MQ0=6;MQRankSum=1.416;QD=26.48;ReadPosRankSum=3.712;VQSLOD=4.8391;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,24:34:29.31:991,29,0	0/0:12,0:12:27.08:0,27,332	0/0:40,0:22:29.28:0,29,314	0/0:30,0:20:31.05:0,31,393	0/0:30,0:30:84.26:0,84,1033	0/0:21,0:21:51.16:0,51,628	0/0:27,0:27:60.19:0,60,738	0/0:26,0:26:63.19:0,63,765	0/0:31,0:32:87.09:0,87,1034	0/0:36,0:36:93.27:0,93,1123	0/0:26,0:27:60.02:0,60,716	0/0:26,0:28:68.88:0,69,804	0/0:30,0:30:81.24:0,81,984	0/0:24,0:24:57.18:0,57,702	1/1:10,32:42:44.35:1225,44,0	0/0:26,0:26:63.18:0,63,763	0/0:21,0:21:57.16:0,57,684	1/1:4,7:11:12.04:196,12,0	0/0:19,0:20:41.93:0,42,468	0/0:39,0:40:99:0,108,1306	0/0:38,0:38:93.26:0,93,1129	0/0:30,0:30:66.17:0,66,785	0/0:16,0:16:30.04:0,30,329	0/0:32,0:32:84.26:0,84,1034	1/1:8,16:24:42.14:685,42,0	0/0:32,0:32:75.24:0,75,923	0/0:40,0:39:92.45:0,92,1074	0/0:24,0:24:57.09:0,57,670
chr10	4230680	.	C	CTTTTTTG	4823.73	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=-1.431;DP=617;FS=0.000;HRun=0;HaplotypeScore=139.0262;InbreedingCoeff=0.8002;MQ=67.30;MQ0=0;MQRankSum=-10.448;QD=41.58;ReadPosRankSum=-0.985;VQSLOD=4.3944;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,12:27:34.01:1135,34,0	0/0:11,0:11:27.07:0,27,544	0/1:19,0:16:18.10:18,0,310	0/0:15,0:15:20.36:0,20,475	0/0:30,0:30:81.22:0,81,1724	0/0:28,0:28:78.19:0,78,1606	0/0:12,0:12:27.08:0,27,591	0/0:28,0:28:66.14:0,66,1089	0/0:23,0:23:39.13:0,39,919	0/0:30,0:30:81.14:0,81,1591	0/0:19,0:19:51.16:0,51,1109	0/0:25,0:25:63.19:0,63,1388	0/0:21,0:21:45.11:0,45,919	0/0:17,0:17:23.90:0,24,442	1/1:3,22:24:45.15:1687,45,0	0/0:17,0:17:45.13:0,45,940	0/0:31,0:31:75.24:0,75,1674	1/1:3,5:15:6.01:184,6,0	0/0:27,0:27:63.18:0,63,1254	0/0:29,0:29:81.28:0,81,1871	0/0:18,0:18:39.12:0,39,827	0/0:13,0:13:30.09:0,30,658	0/0:19,0:19:51.14:0,51,1065	0/0:10,0:10:27.09:0,27,576	1/1:3,19:30:47.81:1799,48,0	0/0:30,0:30:81.22:0,81,1777	0/0:31,0:31:75.23:0,75,1662	0/0:17,0:17:3.28:0,3,804
chr10	4230971	.	C	CA	2077.36	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=1.859;DP=691;FS=0.523;HRun=1;HaplotypeScore=82.6334;InbreedingCoeff=0.9020;MQ=57.23;MQ0=8;MQRankSum=-2.921;QD=29.68;ReadPosRankSum=-0.001;VQSLOD=3.2748;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:84.24:0,84,1057	0/0:10,0:10:30.10:0,30,388	0/0:36,0:13:32.49:0,32,316	0/0:31,0:14:29.42:0,29,313	0/0:17,0:17:36.12:0,36,466	0/0:16,0:16:47.93:0,48,581	0/0:39,0:38:99:0,112,1400	0/0:19,0:18:51.14:0,51,634	0/0:27,0:27:78.25:0,78,997	0/0:28,0:27:78.25:0,78,1005	0/0:22,0:21:60.13:0,60,754	0/0:19,0:19:54.16:0,54,685	0/0:15,0:15:45.15:0,45,584	0/0:23,0:23:69.09:0,69,869	0/0:30,0:30:85.77:0,86,1124	0/0:13,0:13:35.97:0,36,429	0/0:26,0:26:72.21:0,72,911	0/0:31,0:31:84.32:0,84,983	0/0:21,0:19:51.16:0,51,656	0/0:18,0:18:51.15:0,51,648	0/0:54,0:54:99:0,156,1917	0/0:13,0:13:33.11:0,33,428	0/0:25,0:25:66.08:0,66,830	0/0:38,0:38:99:0,108,1375	0/0:14,0:14:24.08:0,24,309	1/1:7,22:28:0.34:976,0,0	1/1:6,20:27:48.03:658,48,0	1/1:2,12:14:39.13:573,39,0
chr10	4231000	.	G	GCA	1422.31	PASS	AB=0.886;AC=7;AF=0.125;AN=56;BaseQRankSum=3.808;DP=692;FS=2.936;HRun=0;HaplotypeScore=97.1839;InbreedingCoeff=0.4500;MQ=54.66;MQ0=11;MQRankSum=-4.141;QD=12.81;ReadPosRankSum=-0.439;VQSLOD=2.9645;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:36:78.07:0,78,903	0/0:11,0:11:24.07:0,24,284	0/0:37,0:7:6.02:0,6,71	0/1:32,0:13:12.91:13,0,185	0/0:17,0:20:41.62:0,42,433	0/1:14,1:16:8.72:9,0,366	0/0:29,0:29:53.99:0,54,618	0/0:27,1:28:3.39:0,3,490	0/0:26,0:29:80.73:0,81,884	0/0:33,0:37:77.39:0,77,816	0/0:18,0:18:41.91:0,42,461	0/0:20,0:20:45.12:0,45,522	0/0:10,0:10:27.08:0,27,319	0/0:18,0:18:42.10:0,42,474	0/0:20,0:21:41.96:0,42,476	0/0:13,0:13:21.06:0,21,249	0/0:28,0:29:64.07:0,64,711	0/0:33,0:34:72.52:0,73,832	0/0:22,0:22:33.10:0,33,389	0/0:14,0:14:9.02:0,9,106	0/0:52,0:56:99:0,120,1313	0/0:15,0:14:36.10:0,36,416	0/0:22,0:23:38.74:0,39,403	0/0:39,0:40:79.18:0,79,957	0/0:15,0:16:27.06:0,27,320	0/1:17,11:27:99:516,0,123	1/1:10,16:25:24.63:830,25,0	1/1:6,3:9:12.04:190,12,0
chr10	4231195	.	T	TG	4503.32	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-4.637;DP=631;FS=1.846;HRun=1;HaplotypeScore=66.3178;InbreedingCoeff=0.9908;MQ=81.12;MQ0=0;MQRankSum=-5.571;QD=42.48;ReadPosRankSum=1.470;VQSLOD=5.1727;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,40:41:99:1724,108,0	0/0:8,0:8:24.08:0,24,335	0/0:21,0:20:57.19:0,57,782	0/0:17,0:17:30.79:0,31,543	0/0:21,0:21:63.21:0,63,878	0/0:19,0:19:54.18:0,54,755	0/0:30,0:30:87.29:0,87,1214	0/0:28,0:28:78.26:0,78,1090	0/0:21,0:21:63.18:0,63,858	0/0:26,0:26:75.25:0,75,1049	0/0:16,0:16:48.16:0,48,671	0/0:30,0:30:90.29:0,90,1241	0/0:14,0:14:42.14:0,42,586	0/0:23,0:23:69.23:0,69,963	1/1:0,23:23:60.20:958,60,0	0/0:16,0:16:48.16:0,48,671	0/0:35,0:35:96.32:0,96,1337	1/1:0,17:17:48.16:767,48,0	0/0:22,0:22:66.19:0,66,902	0/0:17,0:17:48.16:0,48,668	0/0:32,0:32:93.29:0,93,1281	0/0:23,0:23:69.23:0,69,964	0/0:18,0:18:51.15:0,51,695	0/0:27,0:27:81.27:0,81,1133	1/1:1,24:25:66.23:1055,66,0	0/0:39,0:39:99:0,114,1592	0/0:17,0:17:51.17:0,51,713	0/0:5,0:5:12.04:0,12,168
chr10	4231262	.	CCA	C	777.77	PASS	AB=0.953;AC=19;AF=0.352;AN=54;BaseQRankSum=5.353;DP=645;FS=8.778;HRun=0;HaplotypeScore=122.4593;InbreedingCoeff=-0.1885;MQ=58.52;MQ0=13;MQRankSum=-1.151;QD=2.19;ReadPosRankSum=1.666;VQSLOD=1.8465;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:32,0:30:0.47:1,0,0	0/1:7,0:7:18.24:18,0,88	0/0:27,0:11:5.99:0,6,59	0/0:40,0:20:16.79:0,17,166	0/0:15,0:13:15.44:0,15,279	0/1:14,2:16:40.01:40,0,140	0/1:27,0:27:22.03:22,0,499	1/1:28,0:24:1.94:32,2,0	0/0:17,1:18:8.19:0,8,433	0/0:23,0:23:2.96:0,3,451	0/0:14,0:14:15.01:0,15,204	0/1:18,0:18:25.56:26,0,351	0/0:23,1:24:17.20:0,17,525	0/1:24,0:24:42.52:43,0,260	0/0:16,0:16:0:0,0,0	0/0:14,0:14:19.90:0,20,394	0/1:37,6:42:90.11:370,0,90	1/1:17,0:16:8.94:40,9,0	0/1:14,0:14:16.11:16,0,239	0/1:20,1:21:25.31:25,0,275	0/0:63,2:63:72.88:0,73,1605	0/0:20,0:20:18.06:0,18,279	0/1:20,1:21:92.89:93,0,246	0/1:38,1:38:31.33:31,0,900	./.	0/1:18,10:27:34.67:121,0,35	0/1:15,0:16:43.72:46,0,44	0/1:3,0:3:4.64:5,0,61
chr10	4231290	.	ACG	A	761.95	PASS	AB=0.996;AC=23;AF=0.411;AN=56;BaseQRankSum=8.838;DP=777;FS=30.641;HRun=0;HaplotypeScore=130.8706;InbreedingCoeff=-0.1783;MQ=47.62;MQ0=35;MQRankSum=-0.334;QD=1.79;ReadPosRankSum=-0.764;VQSLOD=0.8832;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:19,4:21:2.99:23,3,0	0/1:12,0:11:36.98:37,0,113	0/1:28,0:5:6.87:9,0,7	0/1:42,0:13:47.45:47,0,59	0/1:14,0:12:13.60:14,0,272	0/1:21,0:21:28.99:29,0,197	0/0:35,0:34:24.25:0,24,729	0/1:30,0:21:52.44:52,0,240	0/0:28,0:28:20.99:0,21,637	0/0:27,0:25:42:0,42,675	0/0:13,0:13:9.20:0,9,249	0/0:28,0:28:10.56:0,11,440	0/1:27,0:26:7.22:7,0,532	0/1:22,0:22:43.41:43,0,326	1/1:9,1:10:3:25,3,0	0/0:19,0:19:25.30:0,25,531	0/1:41,1:39:87.42:87,0,326	1/1:13,2:13:23.59:209,24,0	0/1:24,0:19:24.56:25,0,344	0/1:20,0:17:62.83:63,0,340	0/0:121,0:108:99:0,130,2244	0/0:21,0:21:40.97:0,41,450	0/1:31,0:29:36.05:36,0,397	0/0:59,0:57:73.09:0,73,1328	1/1:9,0:8:2.88:15,3,0	0/1:31,0:29:99:157,0,175	0/1:17,0:17:32.15:32,0,120	0/1:7,0:7:19.62:20,0,124
chr10	4231425	.	GACACAGACACAGACACACAC	G	1450.18	PASS	AB=0.938;AC=12;AF=0.231;AN=52;BaseQRankSum=5.317;DP=592;FS=3.769;HRun=0;HaplotypeScore=255.1356;InbreedingCoeff=0.2628;MQ=46.50;MQ0=39;MQRankSum=-5.179;QD=8.95;ReadPosRankSum=-2.324;VQSLOD=2.2496;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:16:1.91:10,2,0	0/0:9,0:9:18.06:0,18,444	./.	./.	0/0:18,0:16:39.07:0,39,1002	0/0:13,0:13:30.08:0,30,783	0/0:34,0:30:67.45:0,67,1519	0/1:31,0:26:49.34:409,0,49	0/0:25,0:25:72.57:0,73,3118	0/0:19,0:17:48.11:0,48,1281	0/0:9,0:8:15.05:0,15,451	0/0:25,0:25:54.60:0,55,2055	0/0:19,0:19:41.97:0,42,975	0/0:20,0:19:48.12:0,48,1650	0/1:15,0:14:16.24:27,0,16	0/0:14,0:14:36.54:0,37,1427	0/1:36,0:36:45.26:45,0,1122	1/1:4,0:4:5.98:60,6,0	0/0:19,0:14:39.05:0,39,577	0/0:14,0:13:30.02:0,30,1178	0/0:94,0:79:99:0,153,4292	0/0:14,0:13:27.08:0,27,1142	0/0:10,0:8:21.05:0,21,829	0/0:39,0:39:75.19:0,75,2985	0/1:17,0:16:0.02:1,0,0	0/1:8,12:16:37.43:184,0,37	1/1:13,0:13:1.02:549,1,0	0/1:8,0:8:81.59:303,0,82
chr10	4231429	.	CAGACACAG	C	1612.19	PASS	AB=0.986;AC=17;AF=0.327;AN=52;BaseQRankSum=7.844;DP=608;FS=1.560;HRun=0;HaplotypeScore=155.4448;InbreedingCoeff=0.3662;MQ=46.42;MQ0=38;MQRankSum=-2.857;QD=7.26;ReadPosRankSum=-2.364;VQSLOD=1.9497;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:18:4.93:43,5,0	0/0:9,0:9:21.07:0,21,415	./.	./.	0/1:18,0:16:8.91:9,0,563	0/1:15,0:15:35.82:36,0,451	0/0:33,0:29:67.06:0,67,1132	1/1:9,22:27:25.85:488,26,0	0/0:25,0:25:57.21:0,57,1860	0/0:19,0:16:48.10:0,48,919	0/0:9,0:8:15.05:0,15,360	0/0:28,0:28:54.26:0,54,1440	0/1:17,0:17:14.20:14,0,553	0/0:20,0:19:46.60:0,47,862	0/1:17,0:16:2.28:31,0,2	0/0:17,0:17:6.56:0,7,848	1/1:35,0:35:50.92:495,51,0	1/1:5,0:5:11.23:107,11,0	0/0:19,0:16:18.49:0,18,565	0/0:15,0:14:24.55:0,25,847	0/0:96,0:81:99:0,134,2762	0/0:14,0:13:23.35:0,23,646	0/0:11,0:9:27.06:0,27,500	0/0:37,0:37:72.24:0,72,2071	1/1:20,0:19:5.91:38,6,0	0/1:20,0:16:51:188,0,51	0/1:15,0:15:99:162,0,136	0/1:8,0:9:37.51:176,0,38
chr10	4233834	.	CTA	C	1265.56	PASS	AB=0.690;AC=4;AF=0.071;AN=56;BaseQRankSum=6.530;DP=534;FS=24.128;HRun=0;HaplotypeScore=66.0652;InbreedingCoeff=-0.0771;MQ=91.32;MQ0=0;MQRankSum=-8.674;QD=15.07;ReadPosRankSum=0.849;VQSLOD=1.7148;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:15,13:28:99:324,0,720	0/0:9,0:9:27.09:0,27,548	0/0:26,0:26:78.27:0,78,1503	0/0:22,0:22:63:0,63,1168	0/0:18,0:18:54.19:0,54,1097	0/0:22,0:22:66.23:0,66,1340	0/0:16,0:16:48.15:0,48,940	0/0:36,0:36:99:0,105,2077	0/0:19,0:19:57.20:0,57,1158	0/0:23,0:23:66.23:0,66,1342	0/0:19,0:19:57.20:0,57,1138	0/0:16,0:16:48.15:0,48,940	0/0:19,0:19:57.20:0,57,1146	0/0:17,0:17:51.18:0,51,1037	0/1:12,12:24:99:511,0,656	0/0:19,0:19:57.20:0,57,1143	0/0:16,0:16:48.16:0,48,973	0/1:7,4:11:99:120,0,297	0/0:30,0:30:90.31:0,90,1824	0/0:15,0:15:45.15:0,45,913	0/0:18,0:18:54.16:0,54,1042	0/0:13,0:13:39.13:0,39,792	0/0:13,0:13:39.13:0,39,777	0/0:15,0:15:45.15:0,45,914	0/1:11,10:21:99:421,0,605	0/0:20,0:20:60.21:0,60,1200	0/0:22,0:22:66.21:0,66,1287	0/0:7,0:7:21.07:0,21,366
chr10	4235106	.	G	GGAGAGT	2836.96	PASS	AB=0.846;AC=10;AF=0.179;AN=56;BaseQRankSum=9.468;DP=397;FS=30.215;HRun=0;HaplotypeScore=120.6068;InbreedingCoeff=0.4977;MQ=53.51;MQ0=27;MQRankSum=-8.610;QD=39.96;ReadPosRankSum=4.968;VQSLOD=1.8551;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,2:8:14.02:239,14,0	0/0:6,0:5:13.27:0,13,258	0/0:43,0:8:18.04:0,18,391	0/0:44,0:9:14.26:0,14,301	0/0:15,0:13:27.09:0,27,692	0/0:5,0:5:12.04:0,12,306	0/0:15,0:15:33.11:0,33,845	0/0:20,0:18:46.94:0,47,1084	0/0:9,0:8:5.68:0,6,269	0/0:13,0:13:37.94:0,38,887	0/0:10,0:8:19.27:0,19,411	0/0:15,0:14:39.13:0,39,969	0/0:8,0:8:19.60:0,20,392	0/0:14,0:13:29.53:0,30,625	0/1:11,3:11:6.16:583,0,6	0/0:13,0:11:20.86:0,21,467	0/0:13,0:13:26.15:0,26,567	1/1:5,2:7:10.64:292,11,0	0/0:18,0:17:48.16:0,48,1196	0/0:20,0:19:54.18:0,54,1336	0/0:8,0:8:18.06:0,18,453	0/0:8,0:8:15.05:0,15,344	0/0:14,0:14:34.35:0,34,797	0/0:8,0:9:20.76:0,21,517	0/1:6,2:7:13.37:297,0,13	0/1:13,6:19:37.47:899,0,37	1/1:4,3:7:17.87:481,18,0	0/1:8,0:6:14.16:202,0,14
chr10	4235111	.	T	TGGGGCTGC	3816.17	PASS	AB=0.878;AC=8;AF=0.143;AN=56;BaseQRankSum=7.779;DP=620;FS=52.954;HRun=0;HaplotypeScore=215.8433;InbreedingCoeff=0.1287;MQ=39.97;MQ0=92;MQRankSum=-6.220;QD=27.86;ReadPosRankSum=6.683;VQSLOD=1.2729;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:14,2:15:99:302,0,181	0/0:5,0:4:10.83:0,11,125	0/0:57,0:5:11.98:0,12,189	0/0:60,0:9:15.04:0,15,301	0/0:31,0:25:51.77:0,52,940	0/0:11,0:11:25.52:0,26,491	0/0:23,0:23:45.98:0,46,1049	0/0:31,0:27:68.47:0,68,1193	0/0:18,0:13:31.85:0,32,411	0/0:26,0:21:48.81:0,49,954	0/0:23,0:20:34.19:0,34,596	0/0:19,0:16:33.08:0,33,819	0/0:15,0:13:31.20:0,31,609	0/0:19,0:12:29.94:0,30,589	0/1:18,2:17:4.89:706,0,5	0/0:25,0:21:55.92:0,56,872	0/0:18,0:14:23.07:0,23,462	0/1:8,2:10:54.80:395,0,55	0/0:22,0:17:45.53:0,46,1138	0/0:29,0:28:73.76:0,74,1594	0/0:9,0:8:18.52:0,19,373	0/0:12,0:10:20.94:0,21,396	0/0:15,0:12:29.93:0,30,697	0/0:15,0:12:19.48:0,19,452	1/1:13,1:12:6.60:296,7,0	0/1:23,2:27:99:1181,0,112	0/1:13,2:12:36.95:576,0,37	0/1:31,0:14:71.46:361,0,71
chr10	4235201	.	G	GCTCTACTA	804.98	PASS	AC=2;AF=0.037;AN=54;BaseQRankSum=-3.301;DP=422;FS=3.259;HRun=0;HaplotypeScore=128.3997;InbreedingCoeff=0.9318;MQ=49.66;MQ0=11;MQRankSum=-3.783;QD=57.50;ReadPosRankSum=-0.561;VQSLOD=3.3946;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:54.16:0,54,1382	0/0:11,0:11:30.10:0,30,798	./.	0/0:6,0:6:12.04:0,12,321	0/0:22,0:22:51.18:0,51,1306	0/0:24,0:24:66.23:0,66,1750	0/0:27,0:25:51.18:0,51,1368	0/0:21,0:18:37.32:0,37,1034	0/0:14,0:14:36.11:0,36,910	0/0:19,0:18:51.18:0,51,1304	0/0:21,0:21:51.18:0,51,1348	0/0:11,0:11:30.10:0,30,799	0/0:12,0:12:36.12:0,36,949	0/0:13,0:13:33.10:0,33,827	0/0:16,0:16:42.13:0,42,1071	0/0:12,0:12:33.11:0,33,885	1/1:4,8:14:21.07:897,21,0	0/0:22,0:22:54.19:0,54,1433	0/0:16,0:15:39.13:0,39,970	0/0:20,0:20:45.63:0,46,1199	0/0:11,0:9:24.08:0,24,644	0/0:18,0:18:42.14:0,42,1118	0/0:10,0:9:24.08:0,24,636	0/0:11,0:11:33.11:0,33,876	0/0:12,0:12:30.10:0,30,805	0/0:14,0:14:39.13:0,39,1046	0/0:15,0:15:39.13:0,39,1045	0/0:7,0:7:12.02:0,12,265
chr10	4237486	.	C	CTT	968.36	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=1.520;DP=240;FS=8.761;HRun=1;HaplotypeScore=35.8900;InbreedingCoeff=0.7446;MQ=77.29;MQ0=6;MQRankSum=-4.098;QD=18.62;ReadPosRankSum=1.802;VQSLOD=0.6904;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:16:12.19:55,12,0	0/0:4,0:4:12.04:0,12,178	0/0:23,0:9:16.79:0,17,224	0/0:21,0:11:24.99:0,25,203	0/0:5,0:5:6.02:0,6,89	0/0:8,0:8:9.03:0,9,134	0/0:11,0:11:30.10:0,30,432	0/0:9,0:9:21:0,21,315	0/0:5,0:5:9.03:0,9,113	0/0:6,0:6:12.04:0,12,180	0/0:4,0:4:6.01:0,6,65	0/0:4,0:4:9.03:0,9,134	0/0:4,0:4:3.01:0,3,45	0/0:2,0:2:6.02:0,6,82	1/1:4,2:6:15.52:235,16,0	0/0:6,0:6:15.05:0,15,218	0/0:10,0:9:21.05:0,21,271	1/1:16,1:17:48.16:741,48,0	0/0:9,0:11:30.03:0,30,357	0/0:6,0:6:18.05:0,18,246	0/0:16,0:16:29.95:0,30,395	0/0:4,0:4:12.04:0,12,175	0/0:3,0:3:9.03:0,9,127	0/0:7,0:8:21.07:0,21,295	1/1:1,12:13:6.02:84,6,0	0/0:5,0:5:15.05:0,15,224	0/0:5,0:5:15.04:0,15,198	0/0:8,0:8:21.07:0,21,310
chr10	4237500	.	C	CTTCGGAG	724.51	PASS	AB=0.965;AC=9;AF=0.167;AN=54;BaseQRankSum=0.982;DP=246;FS=15.913;HRun=0;HaplotypeScore=81.2948;InbreedingCoeff=0.2441;MQ=60.71;MQ0=18;MQRankSum=-4.316;QD=15.42;ReadPosRankSum=1.178;VQSLOD=1.0582;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:10,0:10:56.04:67,0,56	0/0:4,0:4:9.01:0,9,96	0/0:30,0:5:12:0,12,227	0/0:27,0:7:15.39:0,15,251	0/0:6,0:6:9.01:0,9,159	0/0:13,0:13:18.03:0,18,293	0/0:11,0:11:20.93:0,21,297	0/0:3,0:3:0:0,0,0	0/0:8,0:8:6.47:0,6,85	0/0:5,0:5:3:0,3,25	1/1:6,0:6:0.47:1,0,0	0/0:8,0:8:18.04:0,18,339	0/0:8,0:8:3.01:0,3,78	0/0:7,0:7:5.95:0,6,43	1/1:3,3:6:3.85:106,4,0	0/0:7,0:7:17.95:0,18,218	0/0:12,0:10:17.57:0,18,259	0/1:15,2:17:48.80:363,0,49	0/0:10,0:10:20.83:0,21,327	0/0:8,0:8:12.04:0,12,253	0/0:14,0:14:15.04:0,15,302	0/0:5,0:5:2.99:0,3,25	0/0:5,0:5:7.33:0,7,101	0/0:6,0:6:9.02:0,9,177	1/1:4,0:4:1.61:96,2,0	0/1:4,0:4:88.04:207,0,88	0/0:2,0:2:0:0,0,0	./.
chr10	4237502	.	C	CTTCGGAGCT	2678.41	PASS	AB=0.864;AC=14;AF=0.269;AN=52;BaseQRankSum=0.924;DP=262;FS=10.294;HRun=0;HaplotypeScore=96.0758;InbreedingCoeff=0.5601;MQ=55.44;MQ0=17;MQRankSum=-5.046;QD=45.40;ReadPosRankSum=1.979;VQSLOD=2.5692;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,2:6:6.02:261,6,0	0/0:4,0:4:6.02:0,6,96	0/0:27,0:5:12.04:0,12,221	0/0:25,0:6:14.25:0,14,266	0/0:6,0:6:6.02:0,6,130	0/0:11,0:11:15.05:0,15,343	0/0:13,0:13:17.95:0,18,330	0/0:3,0:3:2.97:0,3,20	0/0:10,0:10:3.01:0,3,74	./.	0/1:8,0:8:0:1,0,0	0/0:9,0:9:12.04:0,12,304	0/0:10,0:10:3.01:0,3,90	0/0:7,0:7:2.92:0,3,17	1/1:11,0:11:21.07:825,21,0	0/0:6,0:6:9.03:0,9,185	0/0:16,0:14:8.22:0,8,213	1/1:13,0:13:9.03:411,9,0	0/0:11,0:12:17.89:0,18,341	0/0:8,0:8:12.03:0,12,249	0/0:15,0:15:11.93:0,12,279	./.	0/0:5,0:5:3:0,3,91	0/0:5,0:5:9.03:0,9,220	1/1:5,0:6:12.04:452,12,0	0/1:5,2:8:71.79:564,0,72	1/1:3,0:3:5.98:152,6,0	1/1:3,0:3:6.02:170,6,0
chr10	4238026	.	A	AAGG	7922.99	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=16.293;DP=719;FS=1.201;HRun=0;HaplotypeScore=122.9192;InbreedingCoeff=0.9809;MQ=73.15;MQ0=0;MQRankSum=-15.779;QD=59.13;ReadPosRankSum=3.463;VQSLOD=6.2854;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,30:33:75.26:1734,75,0	0/0:15,0:15:45.15:0,45,839	0/0:10,0:10:27.81:0,28,401	0/0:20,0:21:41.79:0,42,762	0/0:22,0:22:63.22:0,63,1174	0/0:30,0:30:90.31:0,90,1678	0/0:27,0:27:78.27:0,78,1440	0/0:31,0:31:87.28:0,87,1552	0/0:29,0:29:84.29:0,84,1566	0/0:29,0:29:84.29:0,84,1566	0/0:17,0:17:51.17:0,51,915	0/0:43,0:43:99:0,126,2328	0/0:31,0:31:90.27:0,90,1613	0/0:35,0:35:99:0,105,1950	1/1:0,14:16:42.14:965,42,0	0/0:36,0:36:99:0,105,1910	0/0:27,0:26:78.23:0,78,1390	1/1:0,13:14:36.12:816,36,0	0/0:20,0:20:57.20:0,57,1043	0/0:40,0:40:99:0,120,2191	0/0:48,0:48:99:0,144,2614	0/0:25,0:25:72.25:0,72,1335	0/0:26,0:26:78.25:0,78,1416	0/0:23,0:23:69.24:0,69,1286	1/1:0,21:21:60.20:1350,60,0	1/1:1,21:22:10.27:1423,10,0	1/1:1,20:23:60.19:1422,60,0	1/1:0,4:4:9.03:212,9,0
chr10	4240144	.	A	AAAAC	5665.61	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=9.721;DP=638;FS=1.917;HRun=0;HaplotypeScore=112.1131;InbreedingCoeff=0.9649;MQ=61.35;MQ0=1;MQRankSum=-6.682;QD=34.55;ReadPosRankSum=0.517;VQSLOD=5.1045;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:13,4:41:52.61:789,53,0	0/0:7,0:7:21.04:0,21,323	0/0:26,0:19:17.82:0,18,179	0/0:25,0:20:26.87:0,27,333	0/0:30,0:30:69.19:0,69,1054	0/0:32,0:32:78.25:0,78,1278	0/0:19,0:19:45.11:0,45,656	0/0:32,0:32:54.14:0,54,802	0/0:28,0:28:66.20:0,66,1072	0/0:28,0:27:63.17:0,63,979	0/0:20,0:20:51.14:0,51,776	0/0:14,0:14:36.11:0,36,578	0/0:16,0:16:39.11:0,39,599	0/0:20,0:20:51.17:0,51,850	1/1:3,24:29:60.20:1456,60,0	0/0:26,0:26:75.25:0,75,1212	0/0:29,0:29:75.21:0,75,1196	1/1:3,13:15:33.11:795,33,0	0/0:13,0:13:27.08:0,27,406	0/0:21,0:21:51.16:0,51,828	0/0:17,0:17:39.13:0,39,652	0/0:25,0:25:60.15:0,60,902	0/0:22,0:22:57.04:0,57,883	0/0:24,0:24:44.94:0,45,913	1/1:3,19:23:51.18:1245,51,0	1/1:9,6:25:45.52:647,46,0	1/1:2,2:21:39.13:680,39,0	1/1:4,3:9:3:52,3,0
chr10	4240702	.	G	GA	8251.34	PASS	AC=14;AF=0.269;AN=52;BaseQRankSum=-8.805;DP=643;FS=14.074;HRun=1;HaplotypeScore=58.2044;InbreedingCoeff=0.9995;MQ=54.18;MQ0=13;MQRankSum=0.926;QD=39.48;ReadPosRankSum=4.790;VQSLOD=3.9703;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,25:25:66.18:963,66,0	0/0:11,0:11:33.09:0,33,401	./.	./.	0/0:22,0:22:66.21:0,66,856	0/0:14,0:13:39.13:0,39,506	0/0:28,0:27:81.26:0,81,1048	0/0:32,0:25:63.06:0,63,739	0/0:16,0:16:45.15:0,45,584	0/0:31,0:30:87.28:0,87,1129	0/0:18,0:18:54.16:0,54,685	0/0:16,0:16:42.12:0,42,520	0/0:17,0:17:51.14:0,51,633	0/0:19,0:19:57.11:0,57,705	1/1:5,40:45:81.61:1690,82,0	0/0:27,0:27:81.25:0,81,1033	0/0:39,0:39:99:0,117,1485	1/1:1,23:22:24.40:859,24,0	0/0:27,0:20:60.15:0,60,759	0/0:30,0:29:87.24:0,87,1085	0/0:14,0:14:42.08:0,42,510	0/0:19,0:19:57.18:0,57,727	0/0:20,0:19:54.18:0,54,700	0/0:14,0:14:36.11:0,36,459	1/1:2,21:22:60.20:898,60,0	1/1:2,39:42:81.45:1713,81,0	1/1:1,28:29:87.26:1274,87,0	1/1:0,19:19:57.19:853,57,0
chr10	4241009	.	GAGA	G	2237.99	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.604;DP=575;FS=0.592;HRun=0;HaplotypeScore=83.7157;InbreedingCoeff=0.9994;MQ=66.51;MQ0=0;MQRankSum=-3.301;QD=44.76;ReadPosRankSum=2.918;VQSLOD=5.4481;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:44:99:0,129,2944	0/0:12,0:12:36.11:0,36,805	0/0:18,0:16:42.60:0,43,815	0/0:28,0:26:72.23:0,72,1604	0/0:13,0:13:36.12:0,36,824	0/0:18,0:18:54.19:0,54,1257	0/0:21,0:21:63.22:0,63,1454	0/0:40,0:39:99:0,108,2436	0/0:20,0:20:51.17:0,51,1154	0/0:22,0:22:63.16:0,63,1308	0/0:13,0:13:36.12:0,36,834	0/0:17,0:17:48.16:0,48,1100	0/0:19,0:19:54.19:0,54,1261	0/0:24,0:24:72.20:0,72,1548	0/0:25,0:25:75.26:0,75,1723	0/0:19,0:19:54.16:0,54,1203	0/0:23,0:23:69.18:0,69,1532	0/0:15,0:15:39.13:0,39,904	0/0:14,0:14:42.14:0,42,992	0/0:14,0:14:42.13:0,42,945	0/0:35,0:35:99:0,105,2421	0/0:14,0:14:39.12:0,39,841	0/0:13,0:13:39.13:0,39,861	0/0:32,0:32:93.32:0,93,2194	0/0:10,0:10:27.09:0,27,637	1/1:1,15:16:45.14:758,45,0	1/1:2,18:20:54.14:916,54,0	1/1:0,14:14:42.11:708,42,0
chr10	4241084	.	TG	T	1372.03	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=2.442;DP=350;FS=21.718;HRun=9;HaplotypeScore=69.8580;InbreedingCoeff=0.8797;MQ=87.59;MQ0=2;MQRankSum=-3.652;QD=17.37;ReadPosRankSum=0.937;VQSLOD=2.4324;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,16:19:33.47:303,33,0	0/0:4,0:4:6.02:0,6,69	0/0:18,0:17:1.13:0,1,259	0/0:26,0:23:17.03:0,17,260	0/0:7,0:8:20.89:0,21,222	0/0:14,0:14:36.11:0,36,415	0/0:24,0:24:38.86:0,39,389	0/0:14,0:14:21.05:0,21,235	0/0:4,0:5:11.87:0,12,118	0/0:8,0:8:24.07:0,24,277	0/0:12,0:12:30.09:0,30,346	0/0:12,0:12:21.05:0,21,233	0/0:5,0:5:3:0,3,25	0/0:10,0:10:24.06:0,24,268	1/1:3,13:16:32.33:300,32,0	0/0:9,0:9:18.03:0,18,190	0/0:11,0:11:21.06:0,21,242	1/1:0,4:4:12.01:110,12,0	0/0:10,0:10:21.06:0,21,242	0/0:10,0:10:27.04:0,27,289	0/0:28,0:27:47.86:0,48,518	0/0:20,0:19:42.11:0,42,475	0/0:10,0:10:17.92:0,18,208	0/0:13,0:13:21.05:0,21,233	1/1:1,15:16:36.02:329,36,0	1/1:3,10:13:33.01:302,33,0	1/1:0,6:6:12:110,12,0	1/1:0,4:4:12.01:110,12,0
chr10	4241106	.	TG	T	5750.65	PASS	AB=0.792;AC=52;AF=0.929;AN=56;BaseQRankSum=-6.208;DP=319;FS=14.228;HRun=5;HaplotypeScore=58.2748;InbreedingCoeff=-0.0887;MQ=77.07;MQ0=8;MQRankSum=-4.456;QD=18.03;ReadPosRankSum=2.739;VQSLOD=3.3381;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,8:11:20.06:177,20,0	1/1:0,1:1:3.01:34,3,0	0/1:16,5:17:99:121,0,252	0/1:23,3:13:40.15:45,0,40	1/1:10,1:10:8.97:77,9,0	1/1:1,8:9:27.08:305,27,0	1/1:3,16:19:42.06:448,42,0	1/1:2,17:19:48.13:543,48,0	1/1:1,6:7:15.04:170,15,0	1/1:2,7:9:18.05:204,18,0	1/1:4,9:12:24.07:272,24,0	1/1:4,8:12:18.04:194,18,0	1/1:1,2:3:6.02:68,6,0	1/1:2,4:6:15.03:170,15,0	1/1:4,11:13:29.84:309,30,0	1/1:3,6:9:25.62:273,26,0	1/1:1,7:8:15.04:168,15,0	0/1:3,2:5:3.77:78,0,4	1/1:1,10:10:27.08:306,27,0	1/1:4,9:13:20.99:235,21,0	1/1:3,9:10:24.03:258,24,0	1/1:8,7:14:24.05:259,24,0	1/1:5,2:7:6.02:68,6,0	1/1:3,14:17:30.08:340,30,0	1/1:7,9:14:27.32:249,27,0	1/1:5,7:12:23.98:216,24,0	1/1:2,5:7:17.82:137,18,0	0/1:2,1:3:8.56:26,0,9
chr10	4241111	.	GA	G	2042.57	PASS	AB=1.000;AC=50;AF=0.893;AN=56;BaseQRankSum=-3.429;DP=307;FS=0.000;HRun=1;HaplotypeScore=66.8691;InbreedingCoeff=0.4228;MQ=74.79;MQ0=16;MQRankSum=-3.114;QD=7.80;ReadPosRankSum=3.481;VQSLOD=0.7993;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:9:20.45:107,20,0	1/1:1,0:1:2.68:11,3,0	0/0:20,1:17:16.45:0,16,269	0/0:23,1:11:10.57:0,11,76	1/1:3,4:6:3.01:37,3,0	1/1:9,0:9:23.91:101,24,0	1/1:20,0:20:15.20:132,15,0	1/1:21,0:21:20.76:130,21,0	1/1:6,0:6:13.42:61,13,0	0/1:12,0:11:46.31:49,0,46	1/1:12,1:12:21.59:117,22,0	1/1:11,0:11:19.46:123,19,0	1/1:3,0:3:5.49:36,5,0	1/1:6,1:6:16.33:84,16,0	1/1:16,0:14:31.68:158,32,0	1/1:10,0:10:4.67:62,5,0	1/1:9,0:7:13.97:77,14,0	0/1:5,0:5:6.58:38,0,7	1/1:11,0:9:20.16:71,20,0	1/1:12,0:12:18.61:103,19,0	1/1:12,0:9:21.36:120,21,0	1/1:10,1:10:24.47:147,24,0	1/1:5,0:5:5.49:34,5,0	1/1:17,0:17:27.85:120,28,0	1/1:14,0:11:22.94:128,23,0	1/1:8,1:9:12.53:64,13,0	1/1:8,0:7:11.26:50,11,0	1/1:2,0:2:4.83:19,5,0
chr10	4241113	.	GGGA	G	567.42	PASS	AB=0.900;AC=12;AF=0.214;AN=56;BaseQRankSum=5.164;DP=303;FS=39.383;HRun=0;HaplotypeScore=81.3223;InbreedingCoeff=0.6659;MQ=73.39;MQ0=18;MQRankSum=-7.174;QD=8.22;ReadPosRankSum=-4.084;VQSLOD=-0.4756;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,3:10:11.19:91,11,0	0/0:1,0:1:3.01:0,3,59	0/0:20,0:16:40.36:0,40,416	0/0:24,0:11:5.18:0,5,34	0/0:6,0:5:3.01:0,3,38	0/0:9,0:9:27:0,27,428	0/0:18,0:18:42.13:0,42,736	0/0:21,0:21:55.02:0,55,921	0/0:6,0:6:15.03:0,15,236	0/0:12,0:11:21.07:0,21,397	0/0:14,0:13:24.06:0,24,391	0/0:9,0:9:20.40:0,20,216	0/0:4,0:3:6.02:0,6,96	0/0:7,0:6:17.06:0,17,214	1/1:8,9:15:29.42:204,29,0	0/0:11,0:11:30.10:0,30,545	0/0:9,0:7:11.57:0,12,192	0/1:3,1:4:30.92:95,0,31	0/0:11,0:9:27:0,27,443	0/0:10,0:10:17.97:0,18,222	0/0:12,0:9:24.06:0,24,413	0/0:10,0:9:23.81:0,24,357	0/0:4,0:4:4.90:0,5,30	0/0:16,0:16:33.09:0,33,552	1/1:10,4:11:20.33:152,20,0	1/1:7,1:8:8.08:75,8,0	1/1:10,1:9:12.63:87,13,0	0/1:3,0:2:2.92:34,0,3
chr10	4241115	.	GA	G	671.56	PASS	AB=0.800;AC=13;AF=0.232;AN=56;BaseQRankSum=5.931;DP=301;FS=13.764;HRun=1;HaplotypeScore=72.8006;InbreedingCoeff=0.7053;MQ=71.10;MQ0=19;MQRankSum=-7.496;QD=10.83;ReadPosRankSum=-4.788;VQSLOD=-0.6386;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,0:6:11.20:74,11,0	0/0:1,0:1:3.01:0,3,37	0/0:20,0:16:32.85:0,33,360	0/0:20,0:8:5.49:0,5,38	0/0:6,0:5:1.82:0,2,5	0/0:10,0:9:26.27:0,26,277	0/0:19,0:19:36.19:0,36,457	0/0:25,0:25:49.95:0,50,664	0/0:8,0:7:12.24:0,12,150	0/0:10,0:9:20.98:0,21,270	0/0:14,0:13:23.33:0,23,227	0/0:8,0:8:12.61:0,13,114	0/0:6,0:5:2.48:0,2,49	0/0:7,0:6:9.12:0,9,122	1/1:16,1:15:33.93:213,34,0	0/0:11,0:11:28.45:0,28,325	0/0:11,0:9:17.36:0,17,149	0/1:3,1:4:29.97:50,0,30	0/0:11,0:9:27.02:0,27,301	0/0:11,0:11:17.11:0,17,128	0/0:12,0:9:23.41:0,23,241	0/0:9,0:8:8.59:0,9,178	0/0:3,0:3:5.03:0,5,30	0/0:16,0:16:32.95:0,33,330	1/1:13,0:10:21.13:153,21,0	1/1:3,3:6:14.85:134,15,0	1/1:7,4:9:20.47:174,20,0	1/1:2,1:2:5.61:50,6,0
chr10	4241678	.	AC	A	6319.41	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=12.463;DP=735;FS=26.762;HRun=1;HaplotypeScore=70.8221;InbreedingCoeff=0.9997;MQ=77.58;MQ0=0;MQRankSum=-2.810;QD=38.07;ReadPosRankSum=4.240;VQSLOD=2.9174;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,32:32:87.29:1215,87,0	0/0:12,0:12:36.12:0,36,573	0/0:20,0:20:60.19:0,60,918	0/0:30,0:30:87.25:0,87,1276	0/0:32,0:32:93.30:0,93,1437	0/0:26,0:26:72.23:0,72,1124	0/0:32,0:32:96.32:0,96,1492	0/0:41,0:41:99:0,120,1854	0/0:34,1:35:60.38:0,60,1525	0/0:33,0:33:96.32:0,96,1516	0/0:19,0:19:57.19:0,57,911	0/0:33,0:33:96.31:0,96,1484	0/0:30,0:30:90.31:0,90,1429	0/0:29,0:29:87.30:0,87,1380	1/1:0,34:34:96.32:1339,96,0	0/0:33,0:33:96.33:0,96,1533	0/0:23,0:23:63.21:0,63,997	1/1:0,12:12:30.10:419,30,0	0/0:16,0:16:48.13:0,48,710	0/0:25,0:25:75.24:0,75,1176	0/0:22,0:22:63.21:0,63,988	0/0:19,0:19:57.19:0,57,902	0/0:26,0:26:78.25:0,78,1223	0/0:33,0:33:93.30:0,93,1452	1/1:0,30:30:87.29:1217,87,0	1/1:1,30:31:42.32:1167,42,0	1/1:0,15:15:42.14:584,42,0	1/1:0,12:12:27.09:378,27,0
chr10	4241834	.	CTGTGTGTGTGTGTGTGTGTGTG	C	75.78	PASS	AC=2;AF=0.043;AN=46;BaseQRankSum=1.577;DP=332;FS=0.000;HRun=0;HaplotypeScore=132.8565;InbreedingCoeff=0.4382;MQ=43.61;MQ0=22;MQRankSum=-1.577;QD=12.63;ReadPosRankSum=0.052;VQSLOD=1.9488;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/0:7,0:7:15.05:0,15,1175	./.	./.	0/0:13,0:12:18.06:0,18,1560	0/0:21,0:17:24.08:0,24,2281	0/0:20,0:20:16.30:0,16,1378	0/0:14,0:12:22.32:0,22,525	0/0:12,0:10:9.03:0,9,803	0/0:12,0:10:30.10:0,30,2460	0/0:3,0:3:3.01:0,3,284	0/0:16,0:15:20.74:0,21,1956	0/0:10,0:8:15.05:0,15,1066	0/0:13,0:11:18.06:0,18,1456	1/1:2,4:5:3.01:152,3,0	0/0:15,0:14:20.74:0,21,1789	0/0:16,0:14:21.07:0,21,979	./.	0/0:12,0:10:27.08:0,27,1887	0/0:15,0:14:27.09:0,27,2448	0/0:19,0:18:20.73:0,21,1529	0/0:15,0:14:15.02:0,15,1325	0/0:17,0:14:30.10:0,30,2654	0/0:18,0:19:17.98:0,18,1360	./.	0/0:10,0:7:12.51:0,13,666	0/0:4,0:3:2.95:0,3,82	0/0:2,0:6:9.03:0,9,227
chr10	4241945	.	A	AC	2211.03	PASS	AB=0.958;AC=19;AF=0.339;AN=56;BaseQRankSum=3.040;DP=388;FS=13.468;HRun=1;HaplotypeScore=50.5200;InbreedingCoeff=0.8703;MQ=70.56;MQ0=17;MQRankSum=-0.364;QD=14.55;ReadPosRankSum=0.804;VQSLOD=1.5624;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:15:20.78:98,21,0	0/0:3,0:3:9.02:0,9,103	0/0:26,0:11:18.76:0,19,210	0/1:22,0:13:10.46:10,0,136	0/0:14,0:14:35.16:0,35,402	0/0:17,0:16:42.10:0,42,494	0/0:15,0:15:32.69:0,33,367	1/1:12,1:12:35.95:388,36,0	0/0:11,0:9:27.01:0,27,285	0/0:17,0:17:48.05:0,48,534	0/0:12,0:11:30.54:0,31,347	0/0:14,0:14:21.13:0,21,280	0/0:9,0:7:17.13:0,17,204	0/0:5,0:4:12.03:0,12,141	1/1:8,0:7:1.48:57,1,0	0/0:9,0:9:24.50:0,25,249	1/1:15,2:16:39.02:420,39,0	1/1:10,0:8:14.70:75,15,0	0/0:19,0:18:51.07:0,51,534	0/0:19,0:19:44.62:0,45,472	0/0:9,0:6:18.05:0,18,218	0/0:10,0:10:30.01:0,30,291	0/0:14,0:14:35.71:0,36,370	0/0:13,0:13:32.83:0,33,340	1/1:23,0:21:31.68:179,32,0	1/1:3,12:15:40.22:484,40,0	1/1:1,16:17:27.01:369,27,0	1/1:3,7:10:25.88:338,26,0
chr10	4241946	.	C	CCT	1971.05	PASS	AB=1.000;AC=14;AF=0.250;AN=56;BaseQRankSum=0.900;DP=390;FS=11.349;HRun=0;HaplotypeScore=59.3269;InbreedingCoeff=0.6648;MQ=69.09;MQ0=17;MQRankSum=-0.543;QD=15.16;ReadPosRankSum=0.206;VQSLOD=2.3491;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:15,0:15:4.03:44,0,4	0/0:3,0:3:9.02:0,9,121	0/0:26,0:11:19:0,19,221	0/0:22,0:12:0.41:0,0,154	0/0:13,0:14:38.75:0,39,481	0/0:17,0:16:42.11:0,42,589	0/0:12,0:15:35.82:0,36,445	1/1:2,11:13:38.96:524,39,0	0/0:10,0:9:27.02:0,27,335	0/0:16,0:16:48.09:0,48,644	0/0:11,0:12:35.82:0,36,449	0/0:13,0:13:26.54:0,27,351	0/0:8,0:7:20.72:0,21,251	0/0:7,0:6:11.97:0,12,174	0/1:8,0:7:11.66:45,0,12	0/0:8,0:9:26.78:0,27,293	1/1:2,15:16:29.36:700,29,0	0/1:9,0:9:0.74:32,0,1	0/0:18,0:18:51.08:0,51,601	0/0:16,0:19:47.84:0,48,590	0/0:10,0:7:18.04:0,18,267	0/0:8,0:10:30.03:0,30,330	0/0:12,0:14:34.29:0,34,435	0/0:13,0:13:33.03:0,33,425	0/1:21,0:21:8.44:93,0,8	1/1:15,0:16:36.20:319,36,0	1/1:16,0:16:22.61:197,23,0	1/1:9,0:9:23.54:201,24,0
chr10	4243915	.	T	TC	1869.84	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=-0.238;DP=343;FS=13.835;HRun=1;HaplotypeScore=33.2074;InbreedingCoeff=0.7098;MQ=68.37;MQ0=2;MQRankSum=1.636;QD=23.97;ReadPosRankSum=4.495;VQSLOD=2.0046;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,28:29:63.21:872,63,0	0/0:5,0:5:15.04:0,15,181	0/0:18,0:8:23.48:0,23,165	0/1:18,0:6:20.14:20,0,67	0/0:9,0:9:20.81:0,21,270	0/0:9,0:8:24.06:0,24,294	0/0:9,0:9:21.06:0,21,257	0/0:25,0:25:66.14:0,66,816	0/0:6,0:6:18.03:0,18,205	0/0:9,0:9:27.06:0,27,305	0/0:11,0:11:33.10:0,33,412	0/0:7,0:7:15.04:0,15,183	0/0:4,0:4:12.04:0,12,154	0/0:9,0:9:27.06:0,27,318	0/0:11,0:11:33.09:0,33,399	0/0:9,0:9:27.07:0,27,322	1/1:1,30:31:66.29:1106,66,0	0/0:10,0:10:27.01:0,27,286	0/0:18,0:18:51.15:0,51,634	0/0:7,0:7:21.07:0,21,270	0/0:12,0:12:33.10:0,33,410	0/0:5,0:5:15.05:0,15,193	0/0:3,0:3:9.03:0,9,114	0/0:3,0:3:8.99:0,9,85	0/0:13,0:13:36.11:0,36,453	0/0:16,0:16:48.15:0,48,606	0/0:24,0:24:63.16:0,63,764	0/0:13,0:13:39.07:0,39,457
chr10	4244292	.	CT	C	790.55	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=6.939;DP=505;FS=2.250;HRun=8;HaplotypeScore=70.3089;InbreedingCoeff=0.8207;MQ=62.48;MQ0=25;MQRankSum=-4.788;QD=13.18;ReadPosRankSum=1.223;VQSLOD=3.4364;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:35:71.96:0,72,855	0/0:6,0:6:15.05:0,15,181	0/1:17,0:9:0.89:1,0,116	0/0:34,0:18:3.83:0,4,233	0/0:21,0:22:60.04:0,60,691	0/0:12,0:11:30.09:0,30,362	0/0:17,0:14:30.09:0,30,363	0/0:38,0:29:78.20:0,78,926	0/0:14,0:13:30.06:0,30,346	0/0:13,0:12:36.11:0,36,434	0/0:8,0:8:21.06:0,21,254	0/0:15,0:15:42.10:0,42,493	0/0:13,0:13:33.10:0,33,398	0/0:15,0:15:39.09:0,39,454	0/0:13,0:11:18.06:0,18,217	0/0:16,0:14:42.13:0,42,507	0/0:30,0:28:63.18:0,63,747	0/0:27,0:26:51.11:0,51,599	0/0:26,0:24:66.19:0,66,787	0/0:5,0:5:9.03:0,9,109	0/0:28,0:26:60.18:0,60,725	0/0:6,0:6:18.06:0,18,217	0/0:8,0:8:21.06:0,21,254	0/0:25,0:24:69.21:0,69,832	0/0:18,0:18:39.12:0,39,469	1/1:2,13:14:36.02:348,36,0	1/1:2,18:20:48.07:464,48,0	1/1:2,5:6:12.02:116,12,0
chr10	4244316	.	C	CTTCTT	7922.71	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-5.414;DP=569;FS=0.000;HRun=0;HaplotypeScore=89.8873;InbreedingCoeff=0.9736;MQ=70.35;MQ0=5;MQRankSum=-3.628;QD=45.02;ReadPosRankSum=5.371;VQSLOD=4.8392;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,33:39:63.22:1919,63,0	0/0:7,0:7:12.03:0,12,209	0/0:41,0:22:23.12:0,23,369	0/0:55,0:32:34.64:0,35,803	0/0:30,0:30:90.21:0,90,1586	0/0:15,0:15:39.03:0,39,646	0/0:16,0:16:44.59:0,45,786	0/0:36,0:36:93.01:0,93,1484	0/0:16,0:16:42.08:0,42,667	0/0:12,0:12:36.12:0,36,734	0/0:10,0:10:27.07:0,27,480	0/0:13,0:13:39.04:0,39,649	0/0:13,0:13:33.09:0,33,593	0/0:13,0:13:39.13:0,39,764	1/1:0,14:15:21.07:637,21,0	0/0:17,0:17:42.12:0,42,777	1/1:0,29:32:51.18:1551,51,0	1/1:3,25:31:30.10:914,30,0	0/0:26,0:26:72.15:0,72,1201	0/0:8,0:8:24.05:0,24,418	0/0:21,0:21:60.14:0,60,1046	0/0:7,0:7:18.01:0,18,225	0/0:10,0:10:30.09:0,30,544	0/0:23,0:23:66.21:0,66,1304	1/1:2,16:19:24.08:713,24,0	1/1:13,7:20:48.11:1053,48,0	1/1:8,9:17:36.09:993,36,0	1/1:1,1:2:6.02:143,6,0
chr10	4244972	.	TAAAA	T	4607.89	PASS	AB=0.533;AC=11;AF=0.196;AN=56;BaseQRankSum=8.974;DP=607;FS=7.192;HRun=12;HaplotypeScore=106.0238;InbreedingCoeff=0.8386;MQ=70.00;MQ0=2;MQRankSum=-1.742;QD=34.91;ReadPosRankSum=4.795;VQSLOD=3.6990;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:3,0:24:61.49:0,61,367	0/0:9,0:9:27.09:0,27,659	0/0:13,0:14:1.70:0,2,255	0/0:7,0:6:11.93:0,12,155	0/0:28,0:30:82.82:0,83,1838	0/0:27,0:27:72.25:0,72,1691	0/0:19,0:20:60.20:0,60,1355	0/0:25,0:28:78.25:0,78,1712	0/0:22,0:26:63.21:0,63,1397	0/0:26,0:28:72.25:0,72,1710	0/0:28,0:29:78.24:0,78,1755	0/0:21,0:22:60.12:0,60,1397	0/0:19,0:19:51.17:0,51,1208	0/0:21,0:22:51.18:0,51,1214	1/1:3,23:26:60.18:908,60,0	0/0:19,0:20:51.17:0,51,1190	0/0:4,0:26:49.72:0,50,291	1/1:3,10:13:27.05:385,27,0	0/0:13,0:15:45.15:0,45,965	0/0:36,0:39:99:0,105,2441	0/0:9,0:10:24.08:0,24,536	0/0:20,0:21:54.18:0,54,1263	0/0:21,0:21:63.22:0,63,1524	0/0:16,0:16:42.14:0,42,1010	1/1:1,17:18:51.16:772,51,0	0/1:3,21:24:81.08:796,0,81	1/1:4,21:25:48.12:705,48,0	1/1:1,24:25:69.23:1042,69,0
chr10	4245290	.	A	ACTAAT	7697.83	PASS	AB=0.523;AC=11;AF=0.196;AN=56;BaseQRankSum=10.161;DP=628;FS=5.369;HRun=0;HaplotypeScore=118.1896;InbreedingCoeff=0.9199;MQ=86.39;MQ0=2;MQRankSum=-13.570;QD=78.55;ReadPosRankSum=2.742;VQSLOD=7.0918;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:87.26:0,87,1901	0/0:12,0:12:36.12:0,36,838	0/0:29,0:30:81.20:0,81,1573	0/0:17,0:17:20.22:0,20,703	0/0:28,0:28:84.29:0,84,1910	0/0:36,0:36:99:0,99,2220	0/0:25,0:25:75.23:0,75,1656	0/0:34,0:34:99:0,102,2334	0/0:19,0:19:57.20:0,57,1328	0/0:27,0:27:81.26:0,81,1764	0/0:28,0:28:84.27:0,84,1888	0/0:19,0:19:57.15:0,57,1231	0/0:18,0:18:54.14:0,54,1120	0/0:15,0:15:42.14:0,42,979	1/1:0,14:17:42.14:1327,42,0	0/0:29,0:29:87.30:0,87,2025	0/0:20,0:20:60.20:0,60,1354	1/1:1,9:10:24.08:741,24,0	0/0:19,0:19:57.19:0,57,1268	0/0:29,0:29:87.24:0,87,1823	0/0:28,0:28:84.27:0,84,1905	0/0:18,0:18:54.17:0,54,1193	0/0:27,0:27:78.22:0,78,1679	0/0:23,0:23:69.19:0,69,1442	1/1:0,13:13:36.12:1136,36,0	0/1:2,19:22:3.69:1842,0,4	1/1:0,22:26:63.22:1986,63,0	1/1:0,7:7:21.07:666,21,0
chr10	4245492	.	CA	C	5198.44	PASS	AB=0.722;AC=49;AF=0.875;AN=56;BaseQRankSum=-1.689;DP=549;FS=2.834;HRun=13;HaplotypeScore=69.9370;InbreedingCoeff=0.4268;MQ=70.49;MQ0=2;MQRankSum=-0.302;QD=9.98;ReadPosRankSum=1.867;VQSLOD=4.4804;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,12:16:17.82:131,18,0	1/1:2,4:6:8.93:66,9,0	0/1:22,2:18:23.08:59,0,23	0/0:9,0:6:5.74:0,6,39	0/1:12,15:27:10.72:259,0,11	1/1:5,23:30:72.63:515,73,0	1/1:5,17:22:41.73:306,42,0	1/1:15,17:32:20.53:305,21,0	1/1:4,15:19:29.78:219,30,0	1/1:7,14:24:44.86:302,45,0	1/1:6,18:26:48.69:340,49,0	0/1:6,8:14:8.34:110,0,8	1/1:3,9:13:28.85:203,29,0	1/1:9,6:15:11.82:87,12,0	1/1:3,1:12:13.15:51,13,0	1/1:7,18:26:17.50:283,17,0	0/0:6,0:19:34.50:0,35,197	1/1:1,0:9:10.36:31,10,0	1/1:3,14:17:41.71:305,42,0	1/1:5,18:25:45.71:318,46,0	1/1:1,9:13:26.98:171,27,0	1/1:6,11:18:5.65:196,6,0	1/1:7,21:29:24.47:343,24,0	1/1:4,10:15:22.72:159,23,0	1/1:3,0:21:28.48:82,28,0	1/1:4,1:27:46.63:157,47,0	1/1:5,1:20:27.40:93,27,0	1/1:3,1:19:33.26:110,33,0
chr10	4246406	.	AAACAACAACAAC	A	7758.83	PASS	AB=0.587;AC=13;AF=0.232;AN=56;BaseQRankSum=13.361;DP=764;FS=10.629;HRun=0;HaplotypeScore=261.6896;InbreedingCoeff=0.6853;MQ=64.11;MQ0=9;MQRankSum=-13.446;QD=40.62;ReadPosRankSum=4.597;VQSLOD=2.8098;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:15,0:41:99:335,0,283	0/0:10,0:10:24.07:0,24,1271	0/0:40,0:27:49.41:0,49,1934	0/0:34,0:29:53.39:0,53,2283	0/0:25,0:24:63.22:0,63,3432	0/0:11,0:11:24.08:0,24,1305	0/0:24,0:24:54.18:0,54,2877	0/0:28,0:46:87.30:0,87,4154	0/0:32,0:32:78.25:0,78,4251	0/0:31,0:31:63.22:0,63,3572	0/0:12,0:12:27.09:0,27,1576	0/0:40,0:40:99:0,102,5701	0/0:29,0:30:81.28:0,81,4499	0/0:26,0:26:69.24:0,69,3939	1/1:13,26:39:54.15:1801,54,0	0/0:34,0:34:69.24:0,69,3666	0/1:3,0:12:27.79:38,0,28	1/1:5,6:11:9.03:317,9,0	0/0:26,0:25:54.19:0,54,2877	0/0:24,0:24:56.31:0,56,2791	0/0:32,0:34:89.52:0,90,4834	0/0:29,0:28:66.21:0,66,3414	0/0:22,0:22:52.53:0,53,2928	0/0:41,0:42:99:0,117,6449	1/1:5,12:17:33.11:1140,33,0	0/1:9,23:32:99:2115,0,109	1/1:10,13:23:24.55:848,25,0	1/1:3,12:15:33.11:1164,33,0
chr10	4246673	.	TGC	T	876.73	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=10.600;DP=661;FS=1.053;HRun=0;HaplotypeScore=96.8584;InbreedingCoeff=0.6644;MQ=58.66;MQ0=10;MQRankSum=-1.085;QD=5.41;ReadPosRankSum=1.195;VQSLOD=3.1188;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,30:34:9.02:115,9,0	0/0:9,0:9:13.65:0,14,145	0/0:21,0:10:3.72:0,4,109	0/0:38,0:15:17.28:0,17,124	0/0:16,0:16:42.56:0,43,472	0/0:17,0:17:28.82:0,29,540	0/0:26,0:26:55.43:0,55,679	0/0:16,0:15:41.47:0,41,326	0/0:26,0:26:45.20:0,45,730	0/0:36,0:36:89.66:0,90,955	0/0:21,0:21:38.65:0,39,578	0/0:37,0:37:86.08:0,86,1291	0/0:28,0:27:65.92:0,66,859	0/0:25,0:25:52.66:0,53,542	0/1:22,0:22:2.48:141,0,2	0/0:25,0:25:43.11:0,43,631	1/1:19,0:19:1.66:45,2,0	0/1:26,0:26:17.21:114,0,17	0/0:19,0:19:43.13:0,43,411	0/0:15,0:15:31.67:0,32,274	0/0:51,0:51:99:0,100,1026	0/0:18,0:18:50.64:0,51,487	0/0:16,0:16:38.82:0,39,446	0/0:39,0:39:78.67:0,79,1101	0/1:20,0:20:2.43:121,0,2	1/1:22,0:21:23.66:367,24,0	1/1:12,0:12:5.79:38,6,0	1/1:7,0:7:11.99:101,12,0
chr10	4246674	.	GCGCACACACA	G	1376.59	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=8.509;DP=665;FS=0.631;HRun=0;HaplotypeScore=177.7413;InbreedingCoeff=0.4930;MQ=58.61;MQ0=11;MQRankSum=-1.002;QD=12.51;ReadPosRankSum=0.932;VQSLOD=2.7962;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:32:8.98:0,9,197	0/0:9,0:9:25.87:0,26,735	0/0:21,0:10:6.33:0,6,232	0/0:38,0:15:18.59:0,19,240	0/0:16,0:16:45.63:0,46,1280	0/0:17,0:16:42.07:0,42,1606	0/0:25,0:25:60.05:0,60,1879	0/0:17,0:16:47.83:0,48,855	0/0:29,0:29:80.98:0,81,2536	0/0:37,0:37:99:0,107,3112	0/0:21,0:21:48.08:0,48,1846	0/0:36,0:36:99:0,102,3621	0/0:27,0:26:68.97:0,69,2303	0/0:25,0:25:66.14:0,66,1618	0/1:10,0:25:24.74:95,0,25	0/0:25,0:25:68.95:0,69,1787	0/0:0,0:18:1.45:0,1,28	0/1:9,0:25:60.86:61,0,769	0/0:17,0:17:47.80:0,48,1032	0/0:16,0:16:35.74:0,36,876	0/0:54,0:54:99:0,129,3101	0/0:19,0:19:53.95:0,54,1525	0/0:17,0:17:41.92:0,42,1270	0/0:39,0:39:99:0,111,3277	0/1:13,0:21:49.87:50,0,255	1/1:3,17:20:26.88:785,27,0	1/1:0,9:11:6.02:152,6,0	1/1:1,5:7:12.04:384,12,0
chr10	4246676	.	GCA	G	345.26	PASS	AB=0.942;AC=17;AF=0.315;AN=54;BaseQRankSum=5.439;DP=693;FS=0.633;HRun=0;HaplotypeScore=97.0195;InbreedingCoeff=0.0745;MQ=56.15;MQ0=14;MQRankSum=0.167;QD=1.09;ReadPosRankSum=0.927;VQSLOD=1.7513;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:34,0:34:8.83:55,9,0	0/1:9,1:10:39.33:39,0,81	./.	0/0:38,0:15:5.94:0,6,42	0/0:16,0:16:23.87:0,24,323	0/0:16,3:18:0.13:0,0,354	0/0:25,0:28:10.89:0,11,382	0/1:20,0:19:2.72:3,0,95	0/1:27,2:29:92.12:92,0,382	0/0:36,0:38:3.11:0,3,376	0/0:17,1:19:0.11:0,0,348	0/0:35,1:38:8.93:0,9,776	0/0:27,0:27:42.07:0,42,565	0/1:24,1:26:9.21:9,0,175	0/0:28,0:28:11.01:0,11,49	0/1:21,3:25:35.92:36,0,263	0/1:20,0:19:10.06:19,0,10	0/0:23,0:23:26.03:0,26,227	0/1:16,0:17:2.11:2,0,106	0/0:17,0:19:0.92:0,1,141	0/1:50,8:58:26.83:27,0,378	0/0:23,0:23:23.07:0,23,306	0/0:14,0:14:1.28:0,1,246	0/1:35,2:39:46.11:46,0,535	0/0:23,0:23:8.06:0,8,91	1/1:20,0:19:14.20:70,14,0	1/1:11,0:11:5.85:46,6,0	1/1:6,1:7:11.36:56,11,0
chr10	4247023	.	TA	T	995.88	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.965;DP=731;FS=4.758;HRun=2;HaplotypeScore=96.7113;InbreedingCoeff=0.9994;MQ=85.17;MQ0=0;MQRankSum=-2.584;QD=33.20;ReadPosRankSum=0.203;VQSLOD=3.4131;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,120,1799	0/0:13,0:13:39.13:0,39,585	0/0:26,0:26:57.63:0,58,804	0/0:21,0:21:48.15:0,48,693	0/0:31,0:31:93.29:0,93,1352	0/0:26,0:26:75.24:0,75,1103	0/0:21,0:21:63.20:0,63,924	0/0:25,0:25:75.25:0,75,1108	0/0:26,0:26:78.26:0,78,1149	0/0:31,0:31:93.32:0,93,1393	0/0:20,0:20:60.20:0,60,899	0/0:26,0:26:75.22:0,75,1082	0/0:21,0:21:63.21:0,63,944	0/0:24,0:24:72.19:0,72,1035	0/0:29,0:29:87.29:0,87,1303	0/0:23,0:23:69.23:0,69,1034	1/1:0,30:30:84.27:1091,84,0	0/0:20,0:20:60.20:0,60,896	0/0:36,0:36:99:0,102,1511	0/0:25,0:25:72.24:0,72,1079	0/0:27,0:27:81.27:0,81,1212	0/0:35,0:35:99:0,102,1528	0/0:21,0:21:63.21:0,63,941	0/0:23,0:23:69.20:0,69,993	0/0:34,0:34:99:0,99,1483	0/0:32,0:32:93.31:0,93,1376	0/0:35,0:35:99:0,99,1463	0/0:10,0:10:30.10:0,30,450
chr10	4247615	.	G	GA	1922.99	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-3.984;DP=558;FS=10.391;HRun=10;HaplotypeScore=62.0789;InbreedingCoeff=0.9705;MQ=76.14;MQ0=5;MQRankSum=-0.374;QD=16.72;ReadPosRankSum=1.764;VQSLOD=3.6409;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:68.88:0,69,562	0/0:9,0:9:20.90:0,21,162	0/0:33,0:25:16.26:0,16,162	0/0:24,0:16:8.92:0,9,119	0/0:17,0:17:44.93:0,45,368	0/0:23,0:23:52.96:0,53,425	0/0:25,0:25:65.86:0,66,535	0/0:20,0:20:35.59:0,36,274	0/0:20,0:20:47.93:0,48,394	0/0:18,0:18:47.94:0,48,394	0/0:30,0:30:79.88:0,80,639	0/0:27,0:27:58.92:0,59,471	0/0:12,0:12:35:0,35,277	0/0:17,0:17:41.95:0,42,345	1/1:5,15:20:33.08:352,33,0	0/0:17,0:17:47.94:0,48,394	0/0:31,0:31:74.87:0,75,612	1/1:10,16:26:20.47:419,20,0	0/0:25,0:25:32.66:0,33,417	0/0:17,0:17:41.94:0,42,342	0/0:12,0:12:26.96:0,27,222	0/0:14,0:14:21.24:0,21,214	0/0:13,0:13:25.60:0,26,235	0/0:12,0:12:29.92:0,30,244	1/1:4,18:22:35.23:439,35,0	1/1:4,12:16:14.42:347,14,0	1/1:3,18:21:11.45:326,11,0	1/1:2,8:10:21.05:224,21,0
chr10	4247746	.	GGGGGGA	G	1819.78	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=4.511;DP=363;FS=2.436;HRun=0;HaplotypeScore=75.7491;InbreedingCoeff=0.7858;MQ=78.41;MQ0=10;MQRankSum=-4.751;QD=13.48;ReadPosRankSum=2.932;VQSLOD=2.4009;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:7.18:0,7,44	0/0:4,0:4:9.03:0,9,232	0/0:61,0:20:36.59:0,37,792	0/1:54,0:18:23.49:23,0,270	0/0:15,0:15:29.94:0,30,603	0/0:13,0:12:33.96:0,34,682	0/0:13,0:13:35.24:0,35,635	1/1:13,0:13:26.93:228,27,0	0/0:12,0:12:27.03:0,27,565	0/0:16,0:16:45.08:0,45,769	0/0:4,0:4:9.01:0,9,89	0/0:12,0:11:24.06:0,24,471	0/0:5,0:4:12.03:0,12,255	0/0:5,0:5:15.05:0,15,338	1/1:9,1:10:25.66:214,26,0	0/0:6,0:6:15.04:0,15,317	0/0:11,0:11:6:0,6,60	1/1:9,1:10:18.35:203,18,0	0/0:5,0:5:9.03:0,9,197	0/0:7,0:7:18.04:0,18,337	0/0:13,0:13:28.56:0,29,447	0/0:7,0:7:15.49:0,15,236	0/0:4,0:4:6.48:0,6,105	0/0:6,0:6:18.06:0,18,585	1/1:9,2:11:26.23:219,26,0	1/1:12,0:12:2.96:311,3,0	1/1:13,0:12:33.06:401,33,0	1/1:12,0:12:36.03:410,36,0
chr10	4247747	.	GGGGGA	G	2129.32	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=4.022;DP=360;FS=4.509;HRun=0;HaplotypeScore=68.7229;InbreedingCoeff=0.7993;MQ=77.98;MQ0=8;MQRankSum=-4.796;QD=16.38;ReadPosRankSum=2.756;VQSLOD=2.7592;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:2.66:0,3,6	0/0:5,0:5:12.03:0,12,215	0/0:59,0:20:37.51:0,38,636	0/1:50,0:17:6.66:7,0,180	0/0:15,0:15:33.36:0,33,530	0/0:13,0:12:33.08:0,33,564	0/0:14,0:14:37.63:0,38,547	1/1:14,0:14:29.93:255,30,0	0/0:12,0:12:27:0,27,477	0/0:16,0:16:42.08:0,42,621	0/0:5,0:5:11.92:0,12,93	0/0:12,0:11:24.06:0,24,390	0/0:5,0:4:12.03:0,12,217	0/0:5,0:5:15.05:0,15,267	1/1:11,0:11:29.83:252,30,0	0/0:6,0:6:15.02:0,15,256	0/0:11,0:11:2.98:0,3,21	1/1:8,0:9:19.52:192,20,0	0/0:5,0:5:9.03:0,9,169	0/0:7,0:7:18.03:0,18,271	0/0:13,0:13:28.25:0,28,375	0/0:6,0:6:15.49:0,15,207	0/0:4,0:4:6.48:0,6,91	0/0:6,0:6:18.06:0,18,500	1/1:11,0:11:26.23:212,26,0	1/1:3,8:11:5.39:404,5,0	1/1:1,11:11:33.07:497,33,0	1/1:3,9:12:36.04:500,36,0
chr10	4247749	.	GGGA	G	1839.86	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=4.251;DP=351;FS=8.023;HRun=0;HaplotypeScore=59.4301;InbreedingCoeff=0.8879;MQ=77.30;MQ0=8;MQRankSum=-6.222;QD=18.04;ReadPosRankSum=2.944;VQSLOD=2.4705;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,8:10:3.83:20,4,0	0/0:6,0:6:14.97:0,15,154	0/0:53,0:19:20.15:0,20,365	0/0:44,0:14:8.70:0,9,139	0/0:16,0:16:36.26:0,36,395	0/0:13,0:12:36:0,36,393	0/0:14,0:14:33.68:0,34,367	1/1:14,0:14:29.94:255,30,0	0/0:12,0:12:25.27:0,25,319	0/0:16,0:16:44.89:0,45,446	0/0:6,0:6:14.91:0,15,117	0/0:10,0:10:24.04:0,24,258	0/0:5,0:5:15.03:0,15,157	0/0:6,0:6:17.98:0,18,174	1/1:11,0:11:32.82:263,33,0	0/0:6,0:6:12.50:0,13,151	1/1:11,0:11:2.94:18,3,0	1/1:8,0:8:20.29:167,20,0	0/0:6,0:6:12.02:0,12,138	0/0:6,0:6:15.02:0,15,178	0/0:13,0:13:30.43:0,30,274	0/0:6,0:6:18.02:0,18,181	0/0:4,0:4:6.48:0,6,63	0/0:6,0:6:18.06:0,18,332	1/1:10,0:10:29.23:225,29,0	1/1:12,0:12:8.57:324,9,0	1/1:14,0:13:37.30:391,37,0	1/1:12,0:12:36.02:379,36,0
chr10	4247751	.	GA	G	1461.60	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=4.534;DP=335;FS=5.001;HRun=2;HaplotypeScore=50.2213;InbreedingCoeff=0.8756;MQ=75.75;MQ0=5;MQRankSum=-5.747;QD=14.19;ReadPosRankSum=3.217;VQSLOD=3.1478;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:9,1:10:3.83:20,4,0	0/0:6,0:6:14.62:0,15,101	0/0:42,0:17:9.98:0,10,217	0/0:36,0:13:5.26:0,5,108	0/0:16,0:16:35.99:0,36,315	0/0:13,0:12:35.98:0,36,315	0/0:16,0:16:35.77:0,36,309	1/1:14,0:14:29.96:255,30,0	0/0:10,0:11:29.97:0,30,263	0/0:18,0:18:47.69:0,48,406	0/0:6,0:6:14.91:0,15,117	0/0:10,0:10:24.01:0,24,215	0/0:5,0:5:14.94:0,15,119	0/0:6,0:6:17.96:0,18,155	1/1:11,0:11:32.78:250,33,0	0/0:5,0:5:12.01:0,12,109	1/1:1,10:11:2.99:24,3,0	1/1:9,0:9:23.74:161,24,0	0/0:8,0:8:17.95:0,18,149	0/0:5,0:5:15.01:0,15,140	0/0:12,0:12:32.66:0,33,254	0/0:7,0:7:20.96:0,21,177	0/0:3,0:3:6:0,6,52	0/0:6,0:6:18.03:0,18,184	1/1:10,0:10:29.19:212,29,0	1/1:12,0:12:8.66:219,9,0	1/1:14,0:13:36.98:260,37,0	1/1:12,0:12:35.76:261,36,0
chr10	4247868	.	T	TA	870.25	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=-3.149;DP=465;FS=3.939;HRun=11;HaplotypeScore=54.7150;InbreedingCoeff=0.6969;MQ=75.18;MQ0=0;MQRankSum=-0.739;QD=14.27;ReadPosRankSum=-0.741;VQSLOD=3.6672;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,23:28:65.97:654,66,0	0/0:7,0:7:17.91:0,18,139	0/0:12,0:12:1.56:0,2,68	0/0:19,0:16:10.38:0,10,138	0/0:23,1:25:34.35:0,34,440	0/0:6,0:6:11.95:0,12,93	0/1:13,0:12:7.03:7,0,139	0/0:26,0:26:56.73:0,57,437	0/0:21,0:21:47.68:0,48,358	0/0:15,0:15:32.81:0,33,250	0/0:20,0:20:22.11:0,22,296	0/0:15,0:15:38.83:0,39,302	0/0:16,0:16:38.84:0,39,302	0/0:17,0:17:38.83:0,39,300	0/0:17,1:18:47.79:0,48,370	0/0:14,0:14:32.86:0,33,253	1/1:6,14:20:33.07:335,33,0	0/0:11,0:11:14.77:0,15,154	0/0:14,0:14:23.87:0,24,183	0/0:19,0:20:42.62:0,43,348	0/0:10,0:10:20.89:0,21,159	0/0:10,0:10:23.87:0,24,184	0/0:16,0:16:28.93:0,29,286	0/0:15,0:15:38.83:0,39,302	0/0:16,1:17:14.38:0,14,295	0/0:28,0:29:52.78:0,53,400	0/0:20,0:20:53.77:0,54,418	0/0:10,0:11:22.90:0,23,168
chr10	4248250	.	G	GAA	1198.51	PASS	AB=0.929;AC=13;AF=0.232;AN=56;BaseQRankSum=-0.140;DP=501;FS=0.569;HRun=14;HaplotypeScore=77.0033;InbreedingCoeff=0.8170;MQ=65.69;MQ0=1;MQRankSum=-1.405;QD=9.15;ReadPosRankSum=1.179;VQSLOD=1.8161;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,2:28:27.14:104,27,0	0/0:5,0:7:5.63:0,6,79	0/0:10,0:9:17.58:0,18,138	0/0:6,0:5:5.30:0,5,46	0/0:22,0:28:31.93:0,32,325	0/0:17,0:20:35.29:0,35,312	0/0:18,0:19:29.34:0,29,237	1/1:8,0:18:11.86:43,12,0	0/0:6,0:6:4.56:0,5,48	0/0:20,0:19:17.50:0,17,150	0/0:19,0:19:20.58:0,21,175	0/0:12,0:14:20.18:0,20,157	0/0:18,0:18:14.48:0,14,125	0/1:11,0:13:14.71:15,0,70	1/1:6,15:24:24.08:314,24,0	0/0:20,0:20:38.76:0,39,323	1/1:5,12:19:33.08:373,33,0	1/1:4,12:20:23.83:292,24,0	0/0:12,0:14:17.56:0,18,177	0/0:25,0:26:27.82:0,28,275	0/0:18,0:19:18.60:0,19,153	0/0:14,0:16:17.36:0,17,179	0/0:14,0:15:29.52:0,30,234	0/0:20,0:20:26.58:0,27,225	1/1:1,7:9:20.43:244,20,0	0/0:20,0:22:25.85:0,26,187	0/0:21,0:23:29.03:0,29,237	0/0:26,0:28:49.94:0,50,395
chr10	4251856	.	T	TTG	1289.68	PASS	AB=0.963;AC=15;AF=0.288;AN=52;BaseQRankSum=1.279;DP=595;FS=8.940;HRun=0;HaplotypeScore=111.7436;InbreedingCoeff=0.3612;MQ=65.74;MQ0=4;MQRankSum=0.884;QD=5.58;ReadPosRankSum=-1.120;VQSLOD=2.0664;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:26:20.19:0,20,95	0/0:12,0:12:12:0,12,119	./.	./.	0/1:24,0:24:22.91:23,0,175	0/0:26,0:27:12.69:0,13,201	0/0:28,0:30:28.09:0,28,250	0/1:26,0:27:5.59:6,0,83	0/0:12,0:12:5.88:0,6,47	0/0:29,0:29:17.18:0,17,143	0/0:15,0:15:13.83:0,14,126	0/0:23,0:23:33.08:0,33,352	0/1:19,0:19:2.99:3,0,157	0/0:16,0:16:6.01:0,6,65	0/1:24,1:25:14.79:134,0,15	0/0:23,0:23:9.07:0,9,207	1/1:17,5:22:15.52:224,16,0	1/1:6,5:11:18.06:260,18,0	0/1:11,0:11:1.45:21,0,1	0/0:35,0:36:36.07:0,36,305	1/1:28,3:32:35.84:416,36,0	0/1:13,4:18:20.88:114,0,21	0/0:19,0:19:8.94:0,9,82	0/0:18,0:19:23.51:0,24,273	1/1:13,5:18:9.89:244,10,0	0/1:20,0:23:8.64:9,0,43	0/0:13,0:20:22.83:0,23,119	0/0:5,0:6:0.47:0,0,1
chr10	4251909	.	T	TCCCTC	8155.02	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=2.986;DP=503;FS=11.004;HRun=0;HaplotypeScore=118.5437;InbreedingCoeff=0.9221;MQ=75.35;MQ0=2;MQRankSum=-11.563;QD=51.94;ReadPosRankSum=-2.328;VQSLOD=4.1212;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,20:30:56.50:1687,56,0	0/0:4,0:4:9.03:0,9,181	0/1:23,0:20:2.61:3,0,527	0/0:36,0:30:38.65:0,39,1015	0/0:13,0:13:33.11:0,33,649	0/0:21,0:21:48.13:0,48,920	0/0:25,0:25:60.18:0,60,1143	0/0:23,0:23:57.17:0,57,1015	0/0:10,0:10:27.09:0,27,543	0/0:18,0:18:42.14:0,42,818	0/0:12,0:12:33.11:0,33,662	0/0:20,0:20:51.16:0,51,979	0/0:12,0:12:27.09:0,27,516	0/0:10,0:10:30.10:0,30,604	1/1:2,12:17:45.15:1207,45,0	0/0:16,0:16:39.10:0,39,697	1/1:5,13:22:39.13:1127,39,0	1/1:7,3:9:12.04:338,12,0	0/0:20,0:20:48.15:0,48,910	0/0:20,0:20:42.14:0,42,834	0/0:35,0:35:96.33:0,96,1878	0/0:12,0:12:33.11:0,33,581	0/0:6,0:6:15.05:0,15,302	0/0:33,0:33:84.29:0,84,1669	1/1:3,10:14:33.11:981,33,0	1/1:3,13:18:45.15:1320,45,0	1/1:4,13:18:39.13:1167,39,0	1/1:2,3:5:12.04:325,12,0
chr10	4253151	.	AGTCTTGTTTTG	A	3728.58	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.289;DP=578;FS=1.364;HRun=0;HaplotypeScore=178.0411;InbreedingCoeff=0.9675;MQ=87.73;MQ0=0;MQRankSum=-9.545;QD=79.33;ReadPosRankSum=-0.417;VQSLOD=3.5951;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,102,5470	0/0:3,0:3:9.03:0,9,525	0/0:28,0:28:81.25:0,81,3641	0/0:25,0:24:67.74:0,68,2785	0/0:26,0:26:78.27:0,78,4301	0/0:20,0:20:54.16:0,54,2744	0/0:29,0:29:87.28:0,87,4466	0/0:30,0:30:88.18:0,88,4260	0/0:17,0:17:48.16:0,48,2685	0/0:25,0:25:75.25:0,75,3843	0/0:25,0:25:75.26:0,75,4093	0/0:23,0:23:68.97:0,69,3614	0/0:17,0:17:48.16:0,48,2310	0/0:16,0:16:42.14:0,42,2285	1/1:1,16:16:42.14:1518,42,0	0/0:18,0:18:54.19:0,54,2813	0/0:21,0:21:63.22:0,63,3196	1/1:0,11:11:21.07:689,21,0	0/0:19,0:19:57.19:0,57,2679	0/0:17,0:17:51.18:0,51,2896	0/0:29,0:29:84.24:0,84,3808	0/0:12,0:12:36.12:0,36,1949	0/0:19,0:19:57.20:0,57,3206	0/0:25,0:25:75.26:0,75,3977	1/1:0,19:19:42.14:1522,42,0	0/0:26,0:25:75.26:0,75,4012	0/0:22,0:22:63.19:0,63,3071	0/0:4,0:4:12.04:0,12,700
chr10	4253304	.	G	GGGCTA	3366.29	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-3.726;DP=595;FS=4.165;HRun=0;HaplotypeScore=106.6435;InbreedingCoeff=0.9994;MQ=80.36;MQ0=0;MQRankSum=-4.246;QD=78.29;ReadPosRankSum=1.745;VQSLOD=5.5136;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,20:26:60.21:1932,60,0	0/0:9,0:9:27.09:0,27,602	0/0:18,0:19:55.72:0,56,1082	0/0:16,0:15:42.14:0,42,868	0/0:26,0:26:60.20:0,60,1318	0/0:29,0:29:87.27:0,87,1857	0/0:17,0:17:48.16:0,48,1049	0/0:42,0:42:99:0,120,2550	0/0:17,0:17:51.14:0,51,1050	0/0:24,0:24:69.24:0,69,1538	0/0:22,0:22:63.22:0,63,1365	0/0:20,0:20:57.20:0,57,1269	0/0:20,0:20:60.19:0,60,1273	0/0:14,0:14:42.08:0,42,809	0/0:17,0:17:51.13:0,51,1063	0/0:21,0:21:63.22:0,63,1366	1/1:2,13:17:45.15:1434,45,0	0/0:17,0:17:51.17:0,51,1115	0/0:13,0:13:39.13:0,39,848	0/0:26,0:26:78.22:0,78,1691	0/0:21,0:21:57.20:0,57,1254	0/0:21,0:21:60.21:0,60,1293	0/0:19,0:19:51.17:0,51,1107	0/0:23,0:23:69.24:0,69,1495	0/0:21,0:20:60.21:0,60,1338	0/0:25,0:25:72.25:0,72,1605	0/0:38,0:38:99:0,108,2288	0/0:15,0:15:39.13:0,39,868
chr10	4254022	.	C	CTCTGTCTG	5121.48	PASS	AC=14;AF=0.259;AN=54;BaseQRankSum=-6.379;DP=660;FS=2.978;HRun=0;HaplotypeScore=168.6396;InbreedingCoeff=0.9381;MQ=61.72;MQ0=3;MQRankSum=-9.227;QD=30.67;ReadPosRankSum=-1.130;VQSLOD=4.4656;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:30,15:47:20.73:758,21,0	0/0:10,0:10:18.06:0,18,449	./.	0/0:20,0:10:12.04:0,12,239	0/0:19,0:19:39.13:0,39,897	0/0:18,0:18:21.07:0,21,524	0/0:27,0:27:42.14:0,42,986	0/0:32,0:32:15.04:0,15,313	0/0:21,0:21:45.14:0,45,1047	0/0:25,0:25:36.12:0,36,852	0/0:10,0:10:6.02:0,6,150	0/0:26,0:26:39.12:0,39,887	0/0:24,0:24:48.06:0,48,1169	0/0:24,0:24:42.13:0,42,973	1/1:17,16:34:36.12:1469,36,0	0/0:23,0:23:42.14:0,42,966	0/0:54,0:55:99:0,105,2426	1/1:20,4:24:12.04:489,12,0	0/0:25,0:25:18.06:0,18,449	0/0:12,0:12:15.04:0,15,321	0/0:28,0:28:57.20:0,57,1413	0/0:19,0:19:39.12:0,39,923	0/0:16,0:16:18.06:0,18,449	0/0:36,0:37:63.17:0,63,1473	1/1:8,3:14:12.02:392,12,0	1/1:15,6:22:30.10:1177,30,0	1/1:10,4:16:14.83:468,15,0	1/1:3,6:9:9.03:368,9,0
chr10	4254599	.	TACAC	T	247.88	PASS	AB=0.913;AC=12;AF=0.250;AN=48;BaseQRankSum=4.149;DP=483;FS=9.088;HRun=0;HaplotypeScore=84.0316;InbreedingCoeff=0.3039;MQ=68.20;MQ0=9;MQRankSum=-1.610;QD=1.66;ReadPosRankSum=1.017;VQSLOD=0.9587;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:30:3:28,3,0	0/0:4,0:4:3.01:0,3,43	./.	./.	0/0:16,0:15:18.04:0,18,317	0/1:10,1:11:37.08:37,0,104	0/1:23,1:23:28.04:28,0,328	0/0:22,0:22:4.26:0,4,40	0/0:12,0:11:6.02:0,6,112	0/0:15,0:15:18.06:0,18,305	0/0:13,0:13:12.02:0,12,183	0/0:16,0:16:18.04:0,18,298	0/0:9,0:9:11.86:0,12,244	0/0:8,0:8:3.01:0,3,66	0/1:15,1:16:37.31:37,0,69	0/0:17,0:17:36.11:0,36,673	1/1:21,0:23:9.01:84,9,0	0/0:16,0:19:12.39:0,12,105	./.	0/0:15,0:15:6.49:0,6,126	0/0:29,0:28:23.72:0,24,415	0/0:11,0:11:11.78:0,12,187	0/0:14,0:13:14.52:0,15,266	0/0:22,0:22:36.12:0,36,639	0/1:13,0:15:10.88:11,0,93	./.	1/1:20,1:22:9.02:120,9,0	1/1:2,3:4:2.48:45,2,0
chr10	4258811	.	A	AT	976.49	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=2.493;DP=503;FS=0.609;HRun=9;HaplotypeScore=68.9346;InbreedingCoeff=0.8914;MQ=73.26;MQ0=3;MQRankSum=-1.742;QD=21.70;ReadPosRankSum=-0.540;VQSLOD=4.1411;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:71.50:0,71,579	0/0:11,0:11:28.24:0,28,237	0/0:25,0:18:12.35:0,12,153	0/0:14,0:8:2.92:0,3,115	0/0:28,0:28:71.79:0,72,591	0/0:14,0:14:35.98:0,36,312	0/0:25,0:25:56.72:0,57,480	0/0:16,0:16:41.99:0,42,364	0/0:13,0:13:26.97:0,27,232	0/0:21,0:21:41.87:0,42,351	0/0:16,0:16:35:0,35,287	0/0:18,0:18:45.45:0,45,387	0/0:10,0:11:29.03:0,29,240	0/0:13,0:13:29.98:0,30,259	0/0:21,0:21:47.97:0,48,409	0/0:15,0:15:41.98:0,42,364	0/0:32,0:32:7.25:0,7,541	0/0:21,0:21:48.40:0,48,401	0/0:24,0:24:56.97:0,57,493	0/0:15,0:15:38.99:0,39,338	0/0:10,0:10:20.77:0,21,169	0/0:16,0:16:29.94:0,30,252	0/0:6,0:6:14.92:0,15,117	0/0:25,0:25:56.67:0,57,455	0/0:16,0:15:32.93:0,33,270	1/1:2,14:16:41.57:395,42,0	1/1:9,13:22:51.14:560,51,0	1/1:0,7:7:15.04:162,15,0
chr10	4258821	.	AT	A	950.32	PASS	AB=0.934;AC=6;AF=0.107;AN=56;BaseQRankSum=1.607;DP=511;FS=2.661;HRun=11;HaplotypeScore=65.3096;InbreedingCoeff=0.6523;MQ=69.95;MQ0=6;MQRankSum=0.064;QD=8.97;ReadPosRankSum=1.935;VQSLOD=2.6074;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,26:33:56.88:467,57,0	0/0:13,0:13:21.04:0,21,217	0/0:24,0:15:15.12:0,15,99	0/1:17,0:8:7.89:8,0,98	0/0:31,0:31:68.60:0,69,690	0/0:14,0:14:39.07:0,39,399	0/1:21,2:23:4.46:4,0,328	0/0:19,0:19:39.08:0,39,401	0/0:12,0:11:27.05:0,27,273	0/0:15,0:15:30.05:0,30,298	0/0:13,0:13:36.06:0,36,361	0/0:18,0:18:39.55:0,40,405	0/0:11,0:12:23.07:0,23,254	0/0:14,0:14:38.91:0,39,363	0/0:21,0:21:40.09:0,40,165	0/0:17,0:17:45.09:0,45,469	1/1:13,19:32:74.72:600,75,0	0/0:21,0:21:29.17:0,29,149	0/0:22,0:22:42.08:0,42,432	0/0:20,0:20:38.64:0,39,439	0/0:9,0:11:29.91:0,30,302	0/0:13,0:13:27.06:0,27,281	0/0:9,0:9:15.04:0,15,158	0/0:17,1:21:22.88:0,23,379	0/0:15,0:14:26.78:0,27,110	0/0:11,1:16:10.58:0,11,152	0/0:10,0:27:41.18:0,41,222	0/0:5,0:7:13.20:0,13,83
chr10	4258827	.	T	TA	1375.52	PASS	AB=0.769;AC=6;AF=0.107;AN=56;BaseQRankSum=-2.795;DP=521;FS=1.072;HRun=0;HaplotypeScore=61.2258;InbreedingCoeff=0.5587;MQ=65.99;MQ0=11;MQRankSum=0.713;QD=17.19;ReadPosRankSum=6.581;VQSLOD=5.7029;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:68.33:0,68,485	0/0:12,0:12:35.99:0,36,398	0/0:34,0:13:15.33:0,15,160	0/1:23,0:7:5.60:6,0,106	0/0:29,0:29:87.15:0,87,1025	0/0:14,0:14:42.11:0,42,538	0/0:25,0:25:61.88:0,62,708	0/0:20,0:20:57.13:0,57,679	0/0:12,0:11:30.08:0,30,373	0/0:14,0:14:42.10:0,42,490	0/0:14,0:14:39.10:0,39,485	0/0:17,0:17:45.59:0,46,580	0/0:12,0:12:32.99:0,33,381	0/0:14,0:14:39.09:0,39,460	1/1:1,19:20:44.22:610,44,0	0/0:17,0:17:51.12:0,51,674	0/0:29,0:29:82.24:0,82,568	0/1:3,18:21:17.40:485,0,17	0/0:19,0:18:51.06:0,51,620	0/0:18,0:17:51.09:0,51,654	0/0:13,0:12:26.44:0,26,397	0/0:12,0:12:30.08:0,30,389	0/0:8,0:8:21.05:0,21,262	0/0:21,0:21:41.39:0,41,553	1/1:2,13:15:29.17:406,29,0	0/0:17,0:17:8.57:0,9,199	0/0:26,0:26:3.75:0,4,143	0/0:9,0:7:2.82:0,3,50
chr10	4260365	.	GAT	G	32.32	PASS	AB=0.750;AC=1;AF=0.018;AN=56;BaseQRankSum=4.138;DP=318;FS=3.633;HRun=0;HaplotypeScore=48.5703;InbreedingCoeff=-0.0248;MQ=86.65;MQ0=0;MQRankSum=4.071;QD=2.69;ReadPosRankSum=-2.712;VQSLOD=0.9250;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:54.19:0,54,1075	0/0:4,0:4:12.04:0,12,239	0/1:8,4:12:99:107,0,268	0/0:10,1:11:23.64:0,24,371	0/0:11,0:11:27.09:0,27,538	0/0:13,0:13:33.11:0,33,637	0/0:15,0:15:45.14:0,45,856	0/0:19,0:19:54.19:0,54,1070	0/0:8,0:8:24.08:0,24,475	0/0:9,0:9:27.09:0,27,537	0/0:9,0:9:21.54:0,22,419	0/0:10,0:10:30.10:0,30,574	0/0:5,0:5:15.05:0,15,298	0/0:11,0:11:33.11:0,33,641	0/0:9,0:9:27.09:0,27,539	0/0:12,0:12:36.12:0,36,718	0/0:9,0:9:24.08:0,24,476	0/0:2,0:2:6.02:0,6,120	0/0:7,0:7:18.06:0,18,359	0/0:16,0:16:45.14:0,45,838	0/0:9,0:9:21.54:0,22,419	0/0:16,0:16:48.16:0,48,958	0/0:17,0:17:48.16:0,48,950	0/0:13,0:13:39.13:0,39,761	0/0:16,0:16:45.15:0,45,896	0/0:14,0:14:42.13:0,42,804	0/0:16,0:16:42.14:0,42,836	0/0:6,0:6:18.06:0,18,352
chr10	4260557	.	CGATTCCCATTCTCATG	C	1337.40	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.810;DP=550;FS=4.801;HRun=0;HaplotypeScore=227.4359;InbreedingCoeff=0.9780;MQ=78.93;MQ0=0;MQRankSum=-4.863;QD=47.76;ReadPosRankSum=-0.493;VQSLOD=3.0431;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,12:17:11.96:448,12,0	0/0:13,0:13:39.12:0,39,2852	0/0:15,0:15:45.15:0,45,2982	0/0:12,0:12:21.22:0,21,2000	0/0:20,0:20:60.19:0,60,4249	0/0:23,0:23:69.22:0,69,4840	0/0:22,0:22:66.23:0,66,4448	0/0:44,0:44:99:0,129,8176	0/0:20,0:20:60.16:0,60,4089	0/0:30,0:30:87.30:0,87,6378	0/0:13,0:13:39.13:0,39,3003	0/0:28,0:28:84.29:0,84,6562	0/0:18,0:18:54.19:0,54,4152	0/0:21,0:21:60.19:0,60,4578	0/0:22,0:22:63.22:0,63,4995	0/0:24,0:24:72.23:0,72,5099	1/1:2,9:11:21.07:1005,21,0	0/0:18,0:18:54.19:0,54,4176	0/0:14,0:14:39.12:0,39,2224	0/0:11,0:11:30.10:0,30,2160	0/0:28,0:28:84.29:0,84,6532	0/0:21,0:21:63.22:0,63,4759	0/0:18,0:18:54.19:0,54,4010	0/0:14,0:14:42.14:0,42,3268	0/0:24,0:23:69.24:0,69,5023	0/0:23,0:23:66.22:0,66,4665	0/0:17,0:17:51.18:0,51,3981	0/0:9,0:9:24.08:0,24,1893
chr10	4261086	.	GAA	G	1319.58	PASS	AB=0.660;AC=8;AF=0.143;AN=56;BaseQRankSum=10.859;DP=614;FS=5.355;HRun=16;HaplotypeScore=81.2962;InbreedingCoeff=0.3810;MQ=56.82;MQ0=13;MQRankSum=-0.165;QD=7.02;ReadPosRankSum=9.466;VQSLOD=0.3298;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:11,42:57:99:930,116,0	0/0:7,0:7:2.99:0,3,23	0/0:17,0:7:14.56:0,15,102	0/0:13,0:4:5.91:0,6,39	0/0:25,0:30:57.37:0,57,543	0/0:18,0:22:26.61:0,27,253	0/0:18,0:23:55.04:0,55,500	0/1:10,0:17:2.30:2,0,109	0/0:14,0:13:23.99:0,24,252	0/0:12,1:14:4.22:0,4,240	0/0:21,0:21:40.82:0,41,403	0/0:18,0:17:37.78:0,38,342	0/0:10,0:14:18:0,18,181	0/0:18,0:18:37.75:0,38,359	0/1:12,1:22:15.58:16,0,136	0/0:19,1:20:28.68:0,29,443	1/1:11,25:36:59.44:483,59,0	0/1:10,1:25:14.13:14,0,78	0/0:27,0:28:35.37:0,35,430	0/0:23,0:26:47.89:0,48,466	0/0:14,0:14:17.92:0,18,178	0/0:14,0:15:32.31:0,32,308	0/0:15,0:16:19.23:0,19,251	0/0:15,0:22:39.94:0,40,415	0/1:12,1:28:14.65:15,0,98	0/0:19,0:23:48.04:0,48,518	0/0:23,0:24:41.96:0,42,504	0/0:18,0:17:20.40:0,20,241
chr10	4263075	.	ATTG	A	4942.34	PASS	AB=0.525;AC=11;AF=0.196;AN=56;BaseQRankSum=12.533;DP=456;FS=0.000;HRun=0;HaplotypeScore=65.0106;InbreedingCoeff=0.8425;MQ=73.11;MQ0=0;MQRankSum=-2.929;QD=43.35;ReadPosRankSum=1.632;VQSLOD=6.1368;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:42.08:0,42,893	0/0:8,0:8:18.06:0,18,415	0/0:11,0:11:0.63:0,1,399	0/0:8,0:8:21.07:0,21,384	0/0:23,0:23:69.24:0,69,1591	0/0:15,0:15:42.14:0,42,956	0/0:10,0:10:30.10:0,30,672	0/0:39,0:39:99:0,117,2681	0/0:14,0:14:42.14:0,42,956	0/0:22,0:22:66.23:0,66,1515	0/0:15,0:15:45.14:0,45,993	0/0:16,0:16:48.15:0,48,1015	0/0:16,0:16:45.11:0,45,977	0/0:11,0:11:33.11:0,33,749	1/1:0,20:20:54.18:919,54,0	0/0:17,0:17:51.18:0,51,1165	0/0:23,0:23:66.23:0,66,1489	1/1:0,32:32:84.29:1431,84,0	0/0:25,0:25:66.19:0,66,1358	0/0:16,0:16:45.15:0,45,1011	0/0:9,0:9:27.09:0,27,623	0/0:9,0:9:27.08:0,27,577	0/0:10,0:10:30.02:0,30,618	0/0:10,0:10:30.10:0,30,683	1/1:1,11:12:30.10:511,30,0	0/1:2,19:21:9.05:834,0,9	1/1:0,24:24:63.18:1043,63,0	1/1:0,5:5:12.04:204,12,0
chr10	4263411	.	GTCC	G	55.31	PASS	AC=4;AF=0.074;AN=54;BaseQRankSum=1.267;DP=259;FS=0.000;HRun=0;HaplotypeScore=48.5439;InbreedingCoeff=0.4734;MQ=91.21;MQ0=7;MQRankSum=-0.482;QD=5.03;ReadPosRankSum=0.584;VQSLOD=1.1729;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:4:3.66:25,4,0	0/0:3,0:3:6.01:0,6,67	0/0:61,0:33:54.72:0,55,593	0/0:52,0:17:34.16:0,34,312	0/0:2,0:2:5.99:0,6,49	0/0:4,0:4:9.02:0,9,115	0/0:4,0:4:11.98:0,12,162	0/0:5,0:5:15:0,15,133	0/0:9,0:9:23.93:0,24,256	0/0:4,1:5:3:0,3,29	0/0:3,0:3:8.98:0,9,73	0/0:10,0:10:29.93:0,30,371	0/0:5,0:5:14.99:0,15,182	0/0:9,0:9:23.09:0,23,324	0/0:7,0:8:15.03:0,15,240	0/0:15,0:15:38.57:0,39,419	1/1:5,1:7:16.67:134,17,0	0/0:4,0:4:11.90:0,12,186	0/0:4,0:4:12:0,12,117	0/0:1,0:1:3:0,3,26	0/0:10,0:10:8.99:0,9,74	0/0:4,1:5:5.98:0,6,47	0/0:4,2:6:2.36:0,2,65	0/0:6,0:6:15.78:0,16,148	./.	0/0:3,0:3:6.01:0,6,79	0/0:8,0:9:20.75:0,21,200	0/0:3,0:3:9:0,9,96
chr10	4264500	.	CGT	C	1363.31	PASS	AB=0.931;AC=20;AF=0.357;AN=56;BaseQRankSum=10.848;DP=638;FS=17.902;HRun=0;HaplotypeScore=130.7690;InbreedingCoeff=0.2691;MQ=64.25;MQ0=8;MQRankSum=-6.224;QD=4.07;ReadPosRankSum=0.146;VQSLOD=1.4678;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:29:14.40:0,14,115	0/1:5,1:6:18.96:30,0,19	0/0:20,0:11:6.02:0,6,78	0/0:25,0:22:14.71:0,15,182	0/1:19,0:19:2.05:2,0,414	0/1:10,1:11:8.79:9,0,327	0/0:25,2:28:12.23:0,12,648	1/1:13,9:24:34.84:313,35,0	0/0:15,4:19:3.39:0,3,517	0/0:24,0:25:46.11:0,46,719	0/0:8,0:8:15.05:0,15,203	0/0:20,0:20:42.12:0,42,621	0/0:18,1:19:6.13:0,6,495	0/0:26,1:27:30.23:0,30,882	1/1:15,3:18:0.32:90,0,0	0/1:11,1:12:14.81:15,0,242	0/0:23,0:25:0.46:0,0,133	1/1:20,2:22:43.91:324,44,0	0/1:25,0:25:32.50:33,0,380	0/1:10,2:12:8.89:9,0,330	0/1:101,4:104:82.89:83,0,2607	0/0:12,0:12:26.98:0,27,365	0/0:11,0:11:21.04:0,21,286	0/0:31,0:31:52.27:0,52,1006	1/1:12,3:15:5.85:121,6,0	0/1:24,0:26:33.97:251,0,34	1/1:13,0:16:23.46:147,23,0	1/1:20,2:20:17.48:116,17,0
chr10	4264516	.	TGTGTGC	T	2349.20	PASS	AB=0.940;AC=10;AF=0.179;AN=56;BaseQRankSum=11.669;DP=605;FS=21.606;HRun=0;HaplotypeScore=171.3682;InbreedingCoeff=0.3903;MQ=53.15;MQ0=11;MQRankSum=-9.992;QD=14.24;ReadPosRankSum=3.449;VQSLOD=1.5626;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:28:15.72:0,16,151	0/0:5,0:5:14.99:0,15,172	0/0:21,0:9:17.08:0,17,295	0/0:19,0:16:41.28:0,41,507	0/0:11,0:11:33.11:0,33,1017	0/0:14,0:14:39.10:0,39,974	0/0:27,0:27:69:0,69,1704	0/1:22,0:20:13.89:14,0,256	0/0:20,0:20:51.03:0,51,1411	0/0:21,0:21:63.22:0,63,1725	0/0:7,0:7:15.05:0,15,464	0/0:15,0:15:45.11:0,45,1380	0/0:22,0:22:59.94:0,60,1321	0/0:24,0:24:72:0,72,2096	0/1:16,0:16:5.67:116,0,6	0/0:9,0:9:27.06:0,27,674	0/1:24,0:24:3.23:3,0,206	0/1:28,0:28:3.25:306,0,3	0/0:23,0:23:62.46:0,62,1118	0/0:12,0:12:30.09:0,30,809	0/0:100,0:98:99:0,242,6794	0/0:11,0:11:30.06:0,30,748	0/0:10,0:10:24.07:0,24,608	0/0:38,0:38:95.91:0,96,2501	0/1:16,0:16:10.51:141,0,11	0/1:10,13:23:74.33:988,0,74	1/1:7,9:15:26.45:517,26,0	1/1:8,10:17:20.99:418,21,0
chr10	4264518	.	TGTGC	T	2358.88	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=11.289;DP=604;FS=13.099;HRun=0;HaplotypeScore=149.5652;InbreedingCoeff=0.6928;MQ=52.91;MQ0=13;MQRankSum=-9.109;QD=14.84;ReadPosRankSum=2.207;VQSLOD=2.8620;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:28:1.82:0,2,23	0/0:5,0:5:11.88:0,12,86	0/0:22,0:9:13.04:0,13,196	0/0:18,0:14:26.10:0,26,258	0/0:11,0:11:32.88:0,33,650	0/0:14,0:14:38.93:0,39,649	0/0:30,0:30:80.83:0,81,1246	0/1:22,0:20:99:103,0,226	0/0:20,0:20:50.89:0,51,1032	0/0:22,0:22:65.88:0,66,1051	0/0:7,0:7:14.92:0,15,313	0/0:15,0:15:45.11:0,45,1022	0/0:23,0:23:59.79:0,60,836	0/0:23,0:23:68.67:0,69,1391	1/1:7,9:16:21.07:316,21,0	0/0:10,0:10:26.96:0,27,458	0/1:22,0:22:0.04:0,0,108	1/1:22,5:27:57:806,57,0	0/0:23,0:22:61.54:0,62,771	0/0:12,0:12:26.99:0,27,471	0/0:98,0:96:99:0,220,4356	0/0:11,0:11:30:0,30,469	0/0:10,0:10:21.01:0,21,345	0/0:39,0:39:98.27:0,98,1714	1/1:8,7:15:27.09:401,27,0	0/1:22,0:22:50.88:444,0,51	1/1:15,0:14:26.42:258,26,0	1/1:20,0:17:20.97:209,21,0
chr10	4264522	.	CGCGCGT	C	3148.04	PASS	AB=0.940;AC=14;AF=0.250;AN=56;BaseQRankSum=13.758;DP=581;FS=16.297;HRun=0;HaplotypeScore=162.6940;InbreedingCoeff=0.6326;MQ=53.09;MQ0=12;MQRankSum=-7.982;QD=17.79;ReadPosRankSum=0.687;VQSLOD=2.5152;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:25:3.61:32,0,4	0/0:3,0:3:8.39:0,8,189	0/0:17,0:8:24.08:0,24,430	0/0:16,0:10:12.29:0,12,256	0/0:12,0:12:36.12:0,36,914	0/0:14,0:14:36.07:0,36,967	0/0:30,0:30:80.67:0,81,2090	0/1:20,0:18:43.81:44,0,582	0/0:19,0:19:51.17:0,51,1584	0/0:20,0:20:48.13:0,48,1035	0/0:8,0:8:18.06:0,18,513	0/0:16,0:16:48.16:0,48,1494	0/0:22,0:22:53.79:0,54,1340	0/0:22,0:22:47.02:0,47,1673	1/1:11,5:16:20.65:297,21,0	0/0:12,0:12:32.46:0,32,797	0/1:16,1:17:24.38:176,0,24	1/1:17,7:24:46.78:652,47,0	0/0:26,0:24:29.81:0,30,1123	0/0:11,0:11:24.06:0,24,532	0/0:99,0:97:99:0,226,6154	0/0:10,0:10:27.04:0,27,552	0/0:7,0:7:15.05:0,15,366	0/0:39,0:39:96.29:0,96,2563	1/1:10,5:15:20.57:331,21,0	0/1:17,5:22:99:794,0,160	1/1:11,4:14:27.05:510,27,0	1/1:13,7:17:29.88:497,30,0
chr10	4264534	.	CGT	C	127.69	PASS	AB=0.948;AC=6;AF=0.107;AN=56;BaseQRankSum=8.424;DP=542;FS=19.532;HRun=0;HaplotypeScore=124.0169;InbreedingCoeff=-0.0860;MQ=52.18;MQ0=7;MQRankSum=-8.567;QD=1.20;ReadPosRankSum=4.163;VQSLOD=1.1342;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,4:22:3.23:0,3,58	0/0:3,0:3:9.03:0,9,173	0/0:14,0:7:21.07:0,21,390	0/0:14,0:8:14.38:0,14,219	0/0:13,0:13:39.07:0,39,692	0/0:12,0:12:33.11:0,33,621	0/0:35,0:35:96.28:0,96,1659	0/0:17,0:15:42.14:0,42,728	0/0:22,0:22:59.77:0,60,1087	0/0:12,0:12:36.11:0,36,577	0/0:8,0:8:21.07:0,21,404	0/0:19,0:19:57.19:0,57,1040	0/0:21,0:21:60.13:0,60,1037	0/0:22,0:22:63.20:0,63,1128	0/0:14,0:14:1.54:0,2,103	0/0:13,0:13:39.13:0,39,706	0/1:11,9:20:32.44:123,0,32	0/1:21,0:21:6.59:7,0,136	0/0:20,0:18:51.17:0,51,891	0/0:9,0:9:18.06:0,18,331	0/0:92,0:91:99:0,244,4318	0/0:7,0:7:18.05:0,18,314	0/0:9,0:9:24:0,24,367	0/0:37,0:37:93.32:0,93,1682	0/1:14,0:14:5.28:5,0,75	0/1:21,0:21:14.10:14,0,325	0/1:14,0:13:3.77:4,0,34	0/1:16,0:15:8.93:84,0,9
chr10	4264542	.	CGTG	C	310.62	PASS	AB=0.772;AC=7;AF=0.125;AN=56;BaseQRankSum=10.026;DP=541;FS=4.088;HRun=0;HaplotypeScore=131.3622;InbreedingCoeff=0.1035;MQ=54.71;MQ0=6;MQRankSum=-9.795;QD=3.17;ReadPosRankSum=6.290;VQSLOD=1.8690;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:22:5.64:0,6,86	0/0:4,0:4:12.04:0,12,225	0/0:19,0:10:24.55:0,25,507	0/0:15,0:9:24.07:0,24,384	0/0:11,0:11:33.07:0,33,693	0/0:13,0:13:39.13:0,39,819	0/0:36,0:36:99:0,105,2076	0/0:18,0:16:45.15:0,45,886	0/0:21,0:21:59.97:0,60,1331	0/0:12,0:12:36.12:0,36,692	0/0:8,0:8:21.07:0,21,492	0/0:21,0:21:63.21:0,63,1330	0/0:19,0:19:54.18:0,54,1221	0/0:21,0:21:60.20:0,60,1312	1/1:10,3:13:3.76:66,4,0	0/0:14,0:14:42.14:0,42,846	0/0:21,0:21:13.82:0,14,116	0/1:14,5:19:62.99:87,0,63	0/0:20,0:18:54.18:0,54,1032	0/0:6,0:6:15.05:0,15,356	0/0:88,0:87:99:0,238,4965	0/0:7,0:7:18.06:0,18,395	0/0:9,0:9:24.07:0,24,407	0/0:37,0:37:99:0,99,1992	0/1:10,7:17:29.25:61,0,29	0/1:16,4:20:91.59:92,0,281	0/1:10,5:14:10.85:71,0,11	0/1:10,4:14:61.56:62,0,122
chr10	4264546	.	CCTGCCTGCG	C	1792.39	PASS	AB=0.836;AC=10;AF=0.179;AN=56;BaseQRankSum=10.481;DP=527;FS=4.555;HRun=0;HaplotypeScore=177.5655;InbreedingCoeff=0.2599;MQ=55.57;MQ0=4;MQRankSum=-9.080;QD=14.00;ReadPosRankSum=3.650;VQSLOD=2.3627;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:16,0:17:13.71:42,0,14	0/0:3,0:3:9.03:0,9,399	0/0:22,0:12:26.98:0,27,613	0/0:15,0:9:24.52:0,25,387	0/0:9,0:9:27.09:0,27,979	0/0:13,0:13:39.12:0,39,1252	0/0:35,0:35:99:0,102,3758	0/0:19,0:18:51.17:0,51,1252	0/0:22,0:22:63.21:0,63,2472	0/0:13,0:13:39.13:0,39,1347	0/0:7,0:7:21.07:0,21,738	0/0:23,0:23:69.24:0,69,2538	0/0:21,0:21:60.21:0,60,2547	0/0:21,0:21:60.21:0,60,1807	0/1:10,3:13:17.55:172,0,18	0/0:13,0:13:39.13:0,39,1396	0/1:19,0:19:51.16:51,0,89	1/1:12,5:17:7.68:374,8,0	0/0:19,0:17:51.12:0,51,1365	0/0:6,0:6:18.06:0,18,519	0/0:83,0:83:99:0,232,7810	0/0:7,0:7:18.06:0,18,769	0/0:9,0:9:24.55:0,25,742	0/0:39,0:39:99:0,111,4350	0/1:10,7:17:6.46:276,0,6	0/1:15,4:19:99:374,0,322	0/1:8,5:13:27.81:313,0,28	1/1:9,4:13:9.80:338,10,0
chr10	4264547	.	CTGCCTGCG	C	3161.88	PASS	AB=0.864;AC=15;AF=0.268;AN=56;BaseQRankSum=10.448;DP=534;FS=2.413;HRun=0;HaplotypeScore=166.2859;InbreedingCoeff=0.8660;MQ=55.50;MQ0=4;MQRankSum=-10.520;QD=23.42;ReadPosRankSum=0.118;VQSLOD=3.4916;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:19:20.53:177,21,0	0/0:3,0:3:9.03:0,9,313	0/0:23,0:13:8.25:0,8,280	0/0:15,0:9:11.58:0,12,140	0/0:9,0:9:18.06:0,18,688	0/0:12,0:12:24.08:0,24,798	0/0:35,0:35:84.29:0,84,2748	0/0:19,0:18:24.08:0,24,629	0/0:22,0:22:54.17:0,54,1821	0/0:13,0:13:33.11:0,33,938	0/0:7,0:7:15.05:0,15,484	0/0:24,0:24:60.19:0,60,1911	0/0:21,0:21:57.20:0,57,2015	0/0:21,0:21:42.08:0,42,1086	1/1:10,4:14:20.74:333,21,0	0/0:13,0:13:27.09:0,27,994	1/1:18,2:20:13.94:221,14,0	1/1:17,1:18:30.06:583,30,0	0/0:18,0:16:24.08:0,24,765	0/0:7,0:7:15.04:0,15,346	0/0:83,0:83:99:0,169,5216	0/0:6,0:6:18.05:0,18,584	0/0:9,0:9:21.07:0,21,497	0/0:39,0:39:99:0,105,3325	1/1:14,3:17:20.96:416,21,0	0/1:16,3:19:98.26:551,0,98	1/1:14,1:15:21.07:489,21,0	1/1:8,5:13:30.10:589,30,0
chr10	4265681	.	G	GTAAA	300.40	PASS	AC=2;AF=0.043;AN=46;BaseQRankSum=-4.023;DP=245;FS=1.453;HRun=0;HaplotypeScore=43.8511;InbreedingCoeff=0.3567;MQ=35.04;MQ0=42;MQRankSum=0.185;QD=13.65;ReadPosRankSum=-3.318;VQSLOD=1.9794;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:11:18.06:0,18,288	0/0:3,0:3:9.03:0,9,149	./.	./.	0/0:13,0:13:24.08:0,24,388	0/0:13,0:12:33.11:0,33,539	0/0:7,0:6:9.03:0,9,138	1/1:13,8:14:26.99:391,27,0	0/0:6,0:6:3.01:0,3,50	0/0:7,0:7:9.03:0,9,141	0/0:6,0:6:6.01:0,6,75	0/0:7,0:7:9:0,9,112	0/0:2,0:2:3.01:0,3,50	0/0:2,0:2:2.96:0,3,19	0/0:5,0:4:9.03:0,9,148	0/0:3,0:2:6.02:0,6,100	0/0:21,0:16:21.07:0,21,326	0/0:13,0:12:21.01:0,21,284	0/0:25,0:18:32.31:0,32,474	./.	0/0:12,0:8:15.05:0,15,225	./.	./.	0/0:5,0:2:2.99:0,3,24	0/0:7,0:7:5.68:0,6,76	0/0:9,0:8:12.04:0,12,198	0/0:10,0:10:8.86:0,9,150	0/0:17,0:14:24.06:0,24,368
chr10	4265716	.	AG	A	646.83	PASS	AB=1.000;AC=15;AF=0.278;AN=54;BaseQRankSum=4.153;DP=248;FS=1.523;HRun=1;HaplotypeScore=31.2427;InbreedingCoeff=0.6044;MQ=54.99;MQ0=6;MQRankSum=-0.493;QD=8.98;ReadPosRankSum=-0.861;VQSLOD=0.7255;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:9,0:9:18.80:19,0,84	0/0:3,0:3:7.57:0,8,78	0/1:6,0:4:5.34:18,0,5	0/0:6,1:3:5.99:0,6,50	0/0:12,0:12:26.96:0,27,257	0/0:19,0:19:44.89:0,45,477	0/0:5,0:5:6.86:0,7,63	0/0:24,0:20:44.94:0,45,474	0/0:5,0:5:15.03:0,15,168	0/0:3,0:3:5.70:0,6,63	0/0:5,0:5:12.02:0,12,132	0/0:4,0:4:12.02:0,12,132	0/0:4,0:4:5.56:0,6,46	0/0:6,0:6:11.88:0,12,123	1/1:0,7:7:3.01:41,3,0	0/0:9,0:9:23.98:0,24,249	0/0:23,0:22:10.39:0,10,179	1/1:10,6:16:36.29:361,36,0	0/0:22,0:21:41.48:0,41,497	0/1:1,0:1:0:0,0,0	0/0:16,0:16:48.04:0,48,490	./.	0/0:4,0:4:12.02:0,12,131	0/0:5,0:5:6.16:0,6,105	1/1:2,0:2:5.05:45,5,0	1/1:7,0:6:7.86:42,8,0	1/1:6,0:6:8.24:57,8,0	1/1:18,0:18:37.86:230,38,0
chr10	4266525	.	T	TGTGC	1330.52	PASS	AB=0.526;AC=5;AF=0.089;AN=56;BaseQRankSum=-1.259;DP=612;FS=4.986;HRun=0;HaplotypeScore=112.2018;InbreedingCoeff=0.7962;MQ=66.52;MQ0=24;MQRankSum=-0.110;QD=20.47;ReadPosRankSum=1.934;VQSLOD=2.9948;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:14:30.81:0,31,264	0/0:10,0:10:11.67:0,12,230	0/0:48,0:22:59.84:0,60,596	0/0:59,0:23:46.52:0,47,471	0/0:17,0:17:42.02:0,42,548	0/0:20,0:20:48.03:0,48,608	0/0:23,0:23:57.01:0,57,575	0/0:29,0:29:66.28:0,66,598	0/0:21,0:21:47.83:0,48,655	0/0:28,0:26:69.35:0,69,798	0/0:12,0:12:28.83:0,29,360	0/0:16,0:16:41.59:0,42,621	0/0:14,0:13:30.02:0,30,399	0/0:16,0:16:44.79:0,45,536	1/1:3,16:25:24.07:596,24,0	0/0:21,0:21:62.78:0,63,869	0/0:30,0:26:32.96:0,33,335	0/1:2,17:20:7.13:405,0,7	0/0:16,0:15:27.72:0,28,356	0/0:21,0:21:47.88:0,48,584	0/0:26,0:26:61.39:0,61,692	0/0:23,0:23:54.36:0,54,562	0/0:18,0:18:48.46:0,48,580	0/0:23,0:23:53.93:0,54,703	1/1:4,2:20:27.03:458,27,0	0/0:17,0:17:15.29:0,15,314	0/0:13,0:13:23.98:0,24,249	0/0:11,0:9:15.03:0,15,180
chr10	4268002	.	TA	T	1289.92	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=11.062;DP=542;FS=0.000;HRun=8;HaplotypeScore=56.2883;InbreedingCoeff=0.9451;MQ=68.79;MQ0=0;MQRankSum=-0.667;QD=21.86;ReadPosRankSum=-0.005;VQSLOD=3.7791;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:90.26:0,90,1070	0/0:11,0:11:33.09:0,33,387	0/0:8,0:8:9.29:0,9,126	0/0:8,0:8:6.02:0,6,72	0/0:19,0:19:54.17:0,54,652	0/0:19,0:19:57.17:0,57,689	0/0:18,0:18:51.14:0,51,604	0/0:27,0:27:75.22:0,75,895	0/0:20,0:20:51.16:0,51,615	0/0:21,0:21:54.15:0,54,641	0/0:26,0:26:69.21:0,69,832	0/0:15,0:15:39.12:0,39,471	0/0:19,0:19:51.16:0,51,616	0/0:17,0:17:48.13:0,48,568	1/1:3,21:24:66.07:633,66,0	0/0:19,0:19:48.14:0,48,568	0/0:21,0:21:54.17:0,54,651	1/1:2,15:17:42:394,42,0	0/0:14,0:14:39.12:0,39,470	0/0:25,0:25:66.20:0,66,797	0/0:14,0:14:39.12:0,39,471	0/0:10,0:10:30.07:0,30,341	0/0:32,0:32:81.25:0,81,974	0/0:17,0:17:45.14:0,45,543	1/1:1,17:18:42.07:405,42,0	0/0:31,0:31:75.23:0,75,906	0/0:25,0:25:60.18:0,60,721	0/0:16,0:16:48.15:0,48,576
chr10	4269007	.	AGT	A	150.51	PASS	AB=0.920;AC=16;AF=0.333;AN=48;BaseQRankSum=3.659;DP=440;FS=1.051;HRun=0;HaplotypeScore=56.5446;InbreedingCoeff=0.0191;MQ=69.39;MQ0=10;MQRankSum=-0.749;QD=0.84;ReadPosRankSum=0.518;VQSLOD=1.4442;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:38:14.83:0,15,120	0/0:8,0:8:8.93:0,9,86	./.	./.	1/1:12,0:12:2.85:23,3,0	0/1:10,1:11:19.96:20,0,97	0/1:25,0:25:71.92:72,0,106	./.	0/1:11,4:15:14.06:14,0,123	0/0:17,0:17:22.15:0,22,200	0/1:9,0:10:16.10:29,0,16	0/1:13,1:12:16.99:17,0,100	0/1:13,1:14:12.97:26,0,13	0/1:10,1:11:14.17:14,0,124	1/1:5,0:11:11.32:55,11,0	0/0:9,0:9:5.93:0,6,61	1/1:18,0:18:0.88:2,1,0	1/1:10,0:12:2.84:14,3,0	0/0:10,0:10:2.94:0,3,18	0/0:12,0:11:8.97:0,9,70	0/0:28,0:25:26.86:0,27,238	0/0:9,0:9:3.01:0,3,41	0/0:8,0:8:3:0,3,25	0/1:26,1:26:1.94:2,0,281	./.	0/0:16,0:16:7.14:0,7,40	0/0:13,0:11:10.71:0,11,139	0/0:5,0:4:5.98:0,6,47
chr10	4272420	.	CT	C	621.46	PASS	AB=0.877;AC=14;AF=0.250;AN=56;BaseQRankSum=6.945;DP=485;FS=1.623;HRun=16;HaplotypeScore=70.3462;InbreedingCoeff=0.4460;MQ=74.14;MQ0=3;MQRankSum=-0.730;QD=3.66;ReadPosRankSum=4.207;VQSLOD=0.2802;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:12:14.18:41,14,0	0/0:6,2:9:1.04:0,1,96	0/0:17,0:10:12.98:0,13,71	0/0:13,0:11:4.46:0,4,32	0/1:21,3:25:21.52:22,0,243	0/0:20,1:21:17.74:0,18,239	0/0:12,1:13:15.24:0,15,218	0/1:33,4:38:17.77:18,0,280	0/0:20,0:21:32.71:0,33,249	0/0:24,0:26:42.24:0,42,337	0/0:20,1:21:12.35:0,12,196	0/0:12,0:12:14.97:0,15,124	0/0:12,0:12:3.91:0,4,132	0/0:13,0:13:17.97:0,18,149	1/1:6,20:26:49.92:304,50,0	0/0:12,2:17:4.04:0,4,177	1/1:1,0:13:20.36:59,20,0	1/1:4,5:9:2.62:74,3,0	0/0:19,0:20:9.41:0,9,254	0/1:15,5:23:17.41:17,0,146	0/1:6,1:8:6.18:6,0,53	0/0:10,3:13:5.96:0,6,158	0/0:14,2:19:8.65:0,9,162	0/0:13,2:16:12.64:0,13,192	1/1:1,15:16:41.13:251,41,0	0/0:11,0:18:23.42:0,23,151	0/0:6,0:26:37.47:0,37,213	0/0:4,0:7:11.67:0,12,79
chr10	4272786	.	T	TA	2062.18	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-6.097;DP=636;FS=0.000;HRun=0;HaplotypeScore=67.0023;InbreedingCoeff=0.9977;MQ=89.02;MQ0=0;MQRankSum=-4.731;QD=41.24;ReadPosRankSum=2.053;VQSLOD=4.2955;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,120,1672	0/0:9,0:9:27.09:0,27,377	0/0:24,0:25:74.81:0,75,981	0/0:27,0:27:72.15:0,72,952	0/0:30,0:30:87.28:0,87,1197	0/0:22,0:22:66.22:0,66,923	0/0:14,0:14:39.13:0,39,546	0/0:32,0:32:96.32:0,96,1339	0/0:22,0:22:66.22:0,66,921	0/0:25,0:24:72.22:0,72,978	0/0:25,0:25:72.23:0,72,990	0/0:18,0:18:54.17:0,54,738	0/0:33,0:33:99:0,99,1380	0/0:32,0:32:93.30:0,93,1283	1/1:1,22:23:66.23:1055,66,0	0/0:21,0:21:60.20:0,60,839	0/0:22,0:22:66.19:0,66,900	1/1:2,8:10:27.09:431,27,0	0/0:22,0:22:63.20:0,63,860	0/0:27,0:27:75.25:0,75,1043	0/0:38,0:38:99:0,114,1575	0/0:17,0:17:51.16:0,51,698	0/0:12,0:12:36.12:0,36,503	0/0:23,0:23:69.23:0,69,965	1/1:2,15:17:45.15:719,45,0	0/0:20,0:20:60.19:0,60,824	0/0:23,0:23:66.22:0,66,923	0/0:7,0:7:21.07:0,21,292
chr10	4272844	.	AG	A	1493.70	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=7.437;DP=608;FS=8.719;HRun=1;HaplotypeScore=59.2542;InbreedingCoeff=0.9941;MQ=84.30;MQ0=0;MQRankSum=-2.508;QD=36.43;ReadPosRankSum=3.622;VQSLOD=3.7797;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,111,1769	0/0:11,0:11:33.11:0,33,528	0/0:32,0:32:96.23:0,96,1379	0/0:26,0:26:78.22:0,78,1194	0/0:29,0:29:84.29:0,84,1342	0/0:21,0:21:63.20:0,63,980	0/0:15,0:15:45.15:0,45,719	0/0:36,0:36:99:0,108,1707	0/0:22,0:22:66.20:0,66,1009	0/0:25,0:24:75.26:0,75,1199	0/0:23,0:23:66.23:0,66,1055	0/0:22,0:22:66.22:0,66,1048	0/0:27,0:27:81.28:0,81,1292	0/0:21,0:21:63.21:0,63,1007	1/1:0,18:18:54.18:755,54,0	0/0:14,0:14:42.14:0,42,672	0/0:18,0:18:54.16:0,54,838	1/1:0,7:7:18.06:252,18,0	0/0:26,0:26:78.24:0,78,1220	0/0:22,0:22:63.21:0,63,1007	0/0:27,0:27:81.26:0,81,1272	0/0:18,0:18:54.18:0,54,863	0/0:16,0:16:48.16:0,48,767	0/0:20,0:20:60.20:0,60,956	1/1:0,16:16:45.15:629,45,0	0/0:23,0:23:69.24:0,69,1103	0/0:30,0:30:90.29:0,90,1415	0/0:6,0:6:18.06:0,18,288
chr10	4273504	.	GCA	G	4820.90	PASS	AB=0.766;AC=15;AF=0.268;AN=56;BaseQRankSum=9.045;DP=769;FS=2.470;HRun=0;HaplotypeScore=99.0866;InbreedingCoeff=0.5402;MQ=63.35;MQ0=5;MQRankSum=2.384;QD=16.68;ReadPosRankSum=3.856;VQSLOD=5.0188;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,44:62:99:1378,117,0	0/0:10,0:10:21.07:0,21,336	0/0:34,0:20:19.30:0,19,332	0/0:41,0:26:31.11:0,31,378	0/1:20,4:24:49.79:50,0,758	0/1:23,2:25:10.09:10,0,832	0/0:28,0:28:35.53:0,36,1007	0/0:23,0:23:41.86:0,42,380	0/0:20,0:20:54.18:0,54,874	0/0:25,1:26:26.58:0,27,884	0/0:22,0:22:54.18:0,54,863	0/0:28,0:28:37.23:0,37,939	0/1:27,2:29:10.07:10,0,852	0/0:25,0:25:57.19:0,57,885	1/1:5,23:28:51.01:623,51,0	0/0:27,1:28:38.58:0,39,1102	0/0:9,0:39:71.99:0,72,634	1/1:6,25:30:33.81:788,34,0	0/0:20,0:20:51.16:0,51,767	0/0:18,0:18:8.72:0,9,613	0/0:46,0:47:99:0,106,1688	0/0:21,0:21:63.22:0,63,1017	0/0:21,0:21:57.19:0,57,916	0/0:29,0:29:60.20:0,60,973	1/1:6,17:24:38.95:454,39,0	0/1:12,32:45:17.08:1065,0,17	0/1:2,13:15:15.57:333,0,16	1/1:0,5:5:9.03:110,9,0
chr10	4274470	.	CA	C	2149.93	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.824;DP=605;FS=8.759;HRun=2;HaplotypeScore=57.7833;InbreedingCoeff=0.9896;MQ=73.55;MQ0=0;MQRankSum=-0.758;QD=30.71;ReadPosRankSum=1.392;VQSLOD=2.5121;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,126,1862	0/0:8,0:8:24.08:0,24,360	0/0:10,0:10:30.03:0,30,374	0/0:13,0:13:33.07:0,33,445	0/0:30,0:29:84.25:0,84,1234	0/0:22,0:22:60.18:0,60,859	0/0:22,0:22:66.19:0,66,947	0/0:28,0:28:84.26:0,84,1207	0/0:26,0:26:78.26:0,78,1167	0/0:29,0:29:87.29:0,87,1286	0/0:12,0:12:33.11:0,33,494	0/0:20,0:20:57.17:0,57,814	0/0:26,0:26:75.20:0,75,1096	0/0:27,0:27:81.27:0,81,1212	0/0:40,0:40:99:0,120,1778	0/0:15,0:15:45.15:0,45,674	0/0:29,0:29:81.27:0,81,1214	0/0:8,0:8:24.08:0,24,359	0/0:20,0:20:60.18:0,60,860	0/0:16,0:16:45.15:0,45,674	0/0:29,0:29:87.24:0,87,1237	0/0:7,0:7:15.05:0,15,224	0/0:18,0:18:54.18:0,54,809	0/0:25,0:25:75.25:0,75,1124	0/0:13,0:13:39.13:0,39,584	1/1:1,26:27:33.28:929,33,0	1/1:0,37:37:87.28:1129,87,0	1/1:0,6:6:18.06:234,18,0
chr10	4274729	.	C	CT	36.07	PASS	AB=0.931;AC=10;AF=0.200;AN=50;BaseQRankSum=2.429;DP=452;FS=3.260;HRun=15;HaplotypeScore=100.6033;InbreedingCoeff=-0.1762;MQ=65.09;MQ0=21;MQRankSum=-1.628;QD=0.19;ReadPosRankSum=-1.745;VQSLOD=-0.1454;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:12:3.53:0,4,12	0/1:9,1:10:4.06:4,0,85	0/0:61,0:19:3.90:0,4,50	0/1:80,0:25:3.22:8,0,3	0/0:26,0:26:15.96:0,16,220	0/0:9,0:9:17.30:0,17,100	0/0:11,0:11:14.61:0,15,88	0/0:25,0:23:3.85:0,4,20	0/1:7,1:8:19.33:19,0,39	0/0:20,0:21:26.75:0,27,157	0/0:12,0:11:12.30:0,12,67	0/0:6,0:5:3.89:0,4,47	0/1:14,0:12:8.60:9,0,20	0/0:11,0:11:19.26:0,19,103	./.	0/0:8,0:9:9.83:0,10,69	0/0:19,0:17:2.07:0,2,70	./.	0/1:21,2:23:0.16:0,0,158	0/1:15,1:17:7.23:7,0,170	0/1:4,5:9:9.06:41,0,9	0/1:2,0:2:5.92:10,0,6	0/1:9,0:9:7.60:8,0,70	0/0:5,0:6:2.89:0,3,34	./.	0/0:22,0:20:0.82:0,1,85	0/1:21,0:20:46.83:48,0,47	0/0:6,0:5:7.01:0,7,33
chr10	4274743	.	TTG	T	591.87	PASS	AB=0.982;AC=9;AF=0.180;AN=50;BaseQRankSum=0.795;DP=452;FS=10.348;HRun=0;HaplotypeScore=95.5681;InbreedingCoeff=0.2541;MQ=49.04;MQ0=34;MQRankSum=-3.238;QD=5.10;ReadPosRankSum=-2.316;VQSLOD=1.6877;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,4:8:11.11:116,11,0	0/0:9,0:9:25.11:0,25,323	0/0:59,0:14:1.90:0,2,138	0/0:77,0:16:8.54:0,9,49	0/0:26,0:24:39.93:0,40,708	0/0:10,0:10:15.87:0,16,301	0/0:11,0:10:28.94:0,29,283	1/1:19,5:22:28.35:397,28,0	0/0:7,0:7:18.01:0,18,194	0/0:28,0:26:58.85:0,59,662	0/0:13,0:11:26.83:0,27,275	0/0:7,0:6:2.46:0,2,116	0/0:11,0:9:20.53:0,21,189	0/0:12,0:12:29.25:0,29,296	./.	0/0:8,0:8:20.96:0,21,258	0/1:19,1:16:44.44:78,0,44	./.	0/0:22,0:20:34.76:0,35,547	0/0:19,0:19:55.59:0,56,654	0/1:11,0:10:5.33:5,0,125	0/0:4,0:3:8.92:0,9,86	0/0:9,0:9:27.08:0,27,377	0/0:4,0:4:6.97:0,7,114	./.	0/1:23,0:20:47.57:48,0,135	0/1:21,1:20:79.21:79,0,106	0/1:8,0:5:5.92:6,0,16
chr10	4274773	.	TTTTG	T	433.32	PASS	AB=0.983;AC=10;AF=0.192;AN=52;BaseQRankSum=4.335;DP=346;FS=1.416;HRun=0;HaplotypeScore=86.7044;InbreedingCoeff=0.1731;MQ=41.39;MQ0=24;MQRankSum=-5.514;QD=3.21;ReadPosRankSum=-3.218;VQSLOD=1.2256;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:8,0:8:32.72:33,0,76	0/0:4,0:4:12.03:0,12,226	0/1:14,0:2:3.34:3,0,7	0/1:19,0:2:0:0,0,0	0/0:28,0:27:55.71:0,56,941	0/0:15,0:15:34.41:0,34,620	0/0:13,0:11:29.77:0,30,532	0/0:23,0:23:59:0,59,865	0/0:10,0:9:23.78:0,24,328	0/0:22,0:20:55.20:0,55,922	0/0:17,0:14:32.12:0,32,545	0/0:13,0:11:33.01:0,33,488	0/0:7,0:6:12:0,12,206	0/1:11,0:11:1.85:2,0,278	./.	0/0:8,0:8:13.76:0,14,261	0/1:19,0:16:45.17:45,0,169	0/0:1,0:1:3:0,3,25	0/1:17,0:15:2.75:3,0,316	0/0:19,0:18:26.91:0,27,611	0/0:10,0:8:10.15:0,10,210	0/0:2,0:2:6.02:0,6,121	0/0:11,0:11:26.85:0,27,460	0/0:8,0:7:15.02:0,15,277	./.	0/1:16,3:16:45.90:276,0,46	1/1:21,2:21:8.06:183,8,0	0/1:5,0:3:2.23:10,0,2
chr10	4275245	.	GTTTATATAAGGCTATGGA	G	5715.65	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.735;DP=529;FS=3.005;HRun=0;HaplotypeScore=244.1988;InbreedingCoeff=0.9918;MQ=83.28;MQ0=1;MQRankSum=-9.967;QD=114.31;ReadPosRankSum=3.740;VQSLOD=4.7999;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:25:72.25:0,72,5781	0/0:10,0:10:30.10:0,30,2511	0/0:18,0:18:51.15:0,51,3543	0/0:15,0:15:39.61:0,40,2698	0/0:24,0:24:69.24:0,69,5446	0/0:21,0:21:60.19:0,60,4587	0/0:13,0:13:36.12:0,36,2898	0/0:26,0:26:75.25:0,75,5003	0/0:22,0:22:66.23:0,66,5398	0/0:24,0:24:63.22:0,63,5036	0/0:30,0:30:90.29:0,90,7421	0/0:18,0:18:51.18:0,51,4164	0/0:21,0:21:60.19:0,60,4520	0/0:9,0:9:27.09:0,27,2022	1/1:3,20:23:54.19:2785,54,0	0/0:22,0:22:66.23:0,66,5360	0/0:12,0:12:33.11:0,33,2436	1/1:2,9:11:15.05:774,15,0	0/0:21,0:21:57.19:0,57,3934	0/0:27,0:27:81.28:0,81,6672	0/0:17,0:17:48.16:0,48,4103	0/0:24,0:24:72.22:0,72,5434	0/0:14,0:14:42.14:0,42,3189	0/0:9,0:9:27.09:0,27,2307	1/1:1,15:16:42.14:2156,42,0	0/0:20,0:20:60.21:0,60,5187	0/0:29,0:27:84.29:0,84,6848	0/0:7,0:7:21.07:0,21,1596
chr10	4276804	.	C	CT	213.03	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.070;DP=554;FS=11.869;HRun=3;HaplotypeScore=83.7990;InbreedingCoeff=0.7321;MQ=63.71;MQ0=4;MQRankSum=-2.309;QD=8.52;ReadPosRankSum=-0.829;VQSLOD=-0.1428;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:27:45.96:0,46,425	0/0:12,0:12:32.68:0,33,294	0/0:24,0:14:14.01:0,14,153	0/0:22,0:16:1.05:0,1,138	0/0:16,0:16:42:0,42,387	0/0:18,0:17:35.95:0,36,322	0/0:16,0:16:41.50:0,41,382	0/0:22,0:21:50.96:0,51,385	0/0:14,0:14:35.96:0,36,341	0/0:23,0:23:46.57:0,47,407	0/0:25,0:25:49.96:0,50,437	0/0:13,0:13:23.86:0,24,221	0/0:19,0:19:41.73:0,42,385	0/0:22,0:22:44.90:0,45,401	0/0:28,0:28:54.01:0,54,489	0/0:22,0:22:46.85:0,47,452	1/1:6,19:25:24.29:306,24,0	0/0:23,0:23:41.81:0,42,328	0/0:28,0:27:51.11:0,51,454	0/0:15,0:15:44.86:0,45,418	0/0:28,0:28:47.99:0,48,447	0/0:9,0:9:24:0,24,227	0/0:16,0:16:30.42:0,30,285	0/0:28,0:28:51.01:0,51,494	0/0:22,0:22:56.86:0,57,505	0/0:18,0:17:27.11:0,27,168	0/0:12,0:12:6.90:0,7,66	0/0:6,0:6:17.26:0,17,116
chr10	4277043	.	GTCATCA	G	964.41	PASS	AB=0.680;AC=5;AF=0.089;AN=56;BaseQRankSum=5.826;DP=696;FS=20.145;HRun=0;HaplotypeScore=159.0254;InbreedingCoeff=0.6580;MQ=67.92;MQ0=4;MQRankSum=-4.750;QD=18.20;ReadPosRankSum=-0.275;VQSLOD=2.0059;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:26:20.58:0,21,417	0/0:6,0:6:18.04:0,18,511	0/0:33,0:26:15.03:0,15,305	0/0:28,0:21:9.03:0,9,259	0/0:27,0:27:57.20:0,57,1753	0/0:30,0:31:72.18:0,72,2120	0/0:23,0:23:57.18:0,57,1722	0/0:46,0:46:51.17:0,51,1017	0/0:30,0:30:51.18:0,51,1555	0/0:27,0:28:70.05:0,70,1989	0/0:13,0:13:21.02:0,21,552	0/0:24,0:24:39.12:0,39,1145	0/0:37,0:37:63.20:0,63,1890	0/0:22,0:22:39.12:0,39,1164	0/0:42,0:42:12.03:0,12,175	0/0:24,0:25:51.09:0,51,1479	0/0:16,0:15:24.08:0,24,623	0/0:9,0:9:11.95:0,12,119	0/0:19,0:19:21.07:0,21,671	0/0:22,0:22:54.19:0,54,1683	0/0:40,0:40:78.25:0,78,2339	0/0:22,0:22:45.15:0,45,1461	0/0:17,0:17:36.12:0,36,1133	0/0:30,0:33:75.05:0,75,2066	0/0:24,0:24:9:0,9,129	0/1:9,8:17:66.96:401,0,67	1/1:14,15:29:30.10:562,30,0	1/1:5,2:7:6.02:123,6,0
chr10	4278523	.	T	TA	2419.40	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-9.892;DP=534;FS=5.568;HRun=3;HaplotypeScore=50.4501;InbreedingCoeff=0.9984;MQ=82.13;MQ0=0;MQRankSum=-0.714;QD=39.02;ReadPosRankSum=1.980;VQSLOD=3.7297;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:78.24:0,78,936	0/0:12,0:12:33.10:0,33,395	0/0:24,0:24:69.18:0,69,803	0/0:10,0:10:22.85:0,23,256	0/0:22,0:22:54.16:0,54,648	0/0:21,0:21:63.19:0,63,756	0/0:20,0:20:60.18:0,60,720	0/0:31,0:31:87.25:0,87,1032	0/0:20,0:20:51.16:0,51,611	0/0:23,0:23:60.18:0,60,712	0/0:21,0:21:60.16:0,60,706	0/0:17,0:17:51.13:0,51,590	0/0:23,0:23:69.20:0,69,815	0/0:16,0:16:42.13:0,42,503	1/1:0,26:26:78.26:1092,78,0	0/0:15,0:15:45.14:0,45,539	0/0:17,0:17:48.15:0,48,575	1/1:0,13:13:39.13:546,39,0	0/0:16,0:16:48.15:0,48,575	0/0:23,0:23:69.21:0,69,828	0/0:18,0:18:48.15:0,48,576	0/0:14,0:14:42.13:0,42,504	0/0:19,0:19:48.15:0,48,575	0/0:10,0:9:27.08:0,27,324	1/1:1,22:23:66.22:924,66,0	0/0:14,0:14:39.12:0,39,468	0/0:23,0:23:63.19:0,63,756	0/0:12,0:12:36.11:0,36,432
chr10	4279564	.	TA	T	1857.68	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.697;DP=660;FS=3.145;HRun=4;HaplotypeScore=61.8826;InbreedingCoeff=0.9483;MQ=85.56;MQ0=0;MQRankSum=-3.460;QD=29.49;ReadPosRankSum=3.638;VQSLOD=3.6827;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,36:37:93.29:1116,93,0	0/0:2,0:2:6.02:0,6,84	0/0:21,0:21:63.13:0,63,815	0/0:26,0:26:66.18:0,66,859	0/0:17,0:17:48.15:0,48,654	0/0:29,0:29:81.27:0,81,1134	0/0:19,0:19:54.18:0,54,755	0/0:29,0:29:84.27:0,84,1161	0/0:27,0:27:81.27:0,81,1132	0/0:27,0:27:75.25:0,75,1035	0/0:15,0:15:42.14:0,42,577	0/0:35,0:35:97.57:0,98,1346	0/0:34,0:34:99:0,102,1377	0/0:28,0:28:81.27:0,81,1132	0/0:33,0:33:93.31:0,93,1301	0/0:28,0:27:67.28:0,67,1046	1/1:0,26:26:72.22:863,72,0	0/0:26,0:26:78.22:0,78,1069	0/0:15,0:15:36.12:0,36,503	0/0:13,0:13:36.12:0,36,504	0/0:29,0:29:81.27:0,81,1133	0/0:13,0:13:36.12:0,36,504	0/0:13,0:13:39.13:0,39,546	0/0:19,0:19:54.18:0,54,756	0/0:16,0:16:48.16:0,48,672	0/0:31,0:31:87.28:0,87,1204	0/0:32,0:31:87.29:0,87,1216	0/0:20,0:20:57.19:0,57,798
chr10	4279769	.	G	GA	794.59	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=1.840;DP=543;FS=0.000;HRun=7;HaplotypeScore=77.7112;InbreedingCoeff=0.8606;MQ=55.12;MQ0=16;MQRankSum=-3.625;QD=17.27;ReadPosRankSum=-1.933;VQSLOD=3.1479;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:22:36.01:0,36,332	0/0:9,0:9:15.02:0,15,145	0/0:32,0:7:1.33:0,1,55	0/0:35,0:8:3.14:0,3,17	0/0:21,0:20:48.04:0,48,462	0/0:22,0:22:54.07:0,54,512	0/0:18,0:16:27.02:0,27,258	0/0:20,0:20:38.96:0,39,372	0/0:16,0:16:33.04:0,33,319	0/0:29,0:29:69.08:0,69,658	0/0:17,0:17:23.01:0,23,363	0/0:26,0:26:51.06:0,51,489	0/0:21,0:21:35.93:0,36,341	0/0:15,0:15:27.02:0,27,260	1/1:4,7:11:24.53:279,25,0	0/0:16,0:16:30.02:0,30,283	0/0:26,0:24:42.05:0,42,405	1/1:10,13:22:35.28:472,35,0	0/0:21,0:20:45.07:0,45,434	0/0:21,0:21:41.81:0,42,405	0/0:9,0:9:21.03:0,21,203	0/0:9,0:9:20.77:0,21,183	0/0:11,0:11:24.03:0,24,231	0/0:17,0:17:51.01:0,51,475	1/1:8,4:11:17.96:184,18,0	0/0:25,0:25:41.97:0,42,404	0/0:19,0:19:38.90:0,39,360	0/0:13,0:11:20.90:0,21,193
chr10	4279780	.	G	GAA	1202.15	PASS	AB=0.761;AC=13;AF=0.232;AN=56;BaseQRankSum=0.673;DP=583;FS=5.896;HRun=12;HaplotypeScore=80.8855;InbreedingCoeff=0.6837;MQ=59.41;MQ0=19;MQRankSum=-2.985;QD=6.16;ReadPosRankSum=-2.859;VQSLOD=-0.2843;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,16:25:22.84:329,23,0	0/0:5,0:6:11.75:0,12,95	0/0:57,0:10:10.29:0,10,87	0/1:46,0:12:2.11:2,0,94	0/0:21,0:21:53.82:0,54,472	0/0:21,0:22:47.73:0,48,428	0/0:12,0:12:26.58:0,27,220	0/0:20,0:20:32.03:0,32,303	0/0:19,0:19:38.77:0,39,339	0/0:27,0:28:59.45:0,59,520	0/0:22,0:23:35.06:0,35,336	0/0:21,0:23:38.12:0,38,371	0/0:16,0:17:30.91:0,31,323	0/0:11,0:11:29.75:0,30,254	0/1:6,0:11:16.28:16,0,35	0/0:18,0:18:47.99:0,48,427	0/0:19,0:23:44.38:0,44,370	1/1:10,0:23:6.16:83,6,0	0/0:17,0:17:32.65:0,33,289	0/0:16,0:18:35.69:0,36,317	0/0:8,0:8:21.01:0,21,194	0/0:11,0:13:17.89:0,18,211	0/0:14,0:14:25.17:0,25,220	0/0:14,0:15:35.72:0,36,317	1/1:8,1:13:1.85:91,2,0	1/1:15,11:29:9.79:368,10,0	0/1:8,14:25:1.50:224,0,2	1/1:7,11:17:18.06:253,18,0
chr10	4280770	.	CAGTGCAGTG	C	3460.66	PASS	AB=0.677;AC=3;AF=0.060;AN=50;BaseQRankSum=9.358;DP=664;FS=0.000;HRun=0;HaplotypeScore=116.0060;InbreedingCoeff=0.0336;MQ=39.81;MQ0=263;MQRankSum=-9.559;QD=49.44;ReadPosRankSum=3.705;VQSLOD=3.2962;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:24:63.19:0,63,1799	0/0:10,0:7:21.07:0,21,553	./.	./.	0/0:26,0:12:33.55:0,34,841	0/0:17,0:11:30.10:0,30,883	0/0:25,0:4:9.03:0,9,272	./.	0/0:31,0:17:42.14:0,42,1271	0/0:30,0:12:36.12:0,36,1080	0/0:14,0:8:24.08:0,24,753	0/0:27,0:16:48.16:0,48,1375	0/0:25,0:15:42.14:0,42,1267	0/0:30,0:17:39.13:0,39,1177	0/1:13,18:31:6.96:1736,0,7	0/0:22,0:12:36.11:0,36,1058	0/0:29,0:18:42.14:0,42,1275	0/1:10,5:12:99:352,0,236	0/0:17,0:7:21.07:0,21,614	0/0:22,0:12:36.12:0,36,1102	0/0:70,0:30:81.26:0,81,2449	0/0:18,0:11:33.11:0,33,1009	0/0:16,0:9:21.07:0,21,562	0/0:38,0:18:48.16:0,48,1503	0/1:11,13:24:25.09:1372,0,25	0/0:20,0:16:48.16:0,48,1497	0/0:24,0:22:66.23:0,66,2059	0/0:4,0:3:9.03:0,9,236
chr10	4282309	.	AGTC	A	533.68	PASS	AB=0.771;AC=3;AF=0.054;AN=56;BaseQRankSum=3.848;DP=719;FS=0.000;HRun=0;HaplotypeScore=110.5784;InbreedingCoeff=-0.0569;MQ=83.60;MQ0=0;MQRankSum=-5.949;QD=9.20;ReadPosRankSum=2.472;VQSLOD=3.2483;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,144,3529	0/0:6,0:6:18.06:0,18,435	0/0:22,0:22:66.21:0,66,1451	0/0:26,0:26:51.67:0,52,1511	0/0:37,0:36:93.29:0,93,2240	0/0:26,0:26:78.27:0,78,1870	0/0:33,0:33:99:0,99,2391	0/0:26,0:26:75.24:0,75,1694	0/0:23,0:23:69.22:0,69,1624	0/0:19,0:19:54.19:0,54,1283	0/0:28,0:28:81.28:0,81,1969	0/0:23,0:23:69.24:0,69,1668	0/0:20,0:20:60.21:0,60,1452	0/0:25,0:25:75.26:0,75,1842	0/0:29,0:29:87.30:0,87,2111	0/0:26,0:26:78.22:0,78,1784	0/0:44,0:44:99:0,132,3164	0/0:27,0:27:81.28:0,81,1918	0/0:13,0:13:39.13:0,39,958	0/0:22,0:22:66.23:0,66,1619	0/0:45,0:45:99:0,132,3247	0/0:17,0:17:48.15:0,48,1128	0/0:27,0:27:81.28:0,81,1942	0/0:28,0:28:84.29:0,84,2062	0/0:18,0:18:51.18:0,51,1256	0/1:14,5:19:99:189,0,769	0/1:19,12:31:99:357,0,1091	0/1:6,2:8:87.60:88,0,419
chr10	4282585	.	C	CGAAA	2981.62	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-6.551;DP=471;FS=24.067;HRun=0;HaplotypeScore=81.0765;InbreedingCoeff=0.9938;MQ=87.73;MQ0=0;MQRankSum=-3.593;QD=80.58;ReadPosRankSum=1.115;VQSLOD=2.8382;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:72.18:0,72,1426	0/0:7,0:7:21.07:0,21,440	0/0:22,0:22:66.20:0,66,1281	0/0:14,0:14:42.14:0,42,852	0/0:19,0:19:57.20:0,57,1180	0/0:18,0:18:48.64:0,49,988	0/0:19,0:19:57.14:0,57,1136	0/0:36,0:36:99:0,108,2217	0/0:14,0:14:42.14:0,42,880	0/0:13,0:13:39.13:0,39,824	0/0:21,0:21:63.22:0,63,1321	0/0:19,0:19:57.18:0,57,1138	0/0:9,0:9:24.07:0,24,493	0/0:18,0:18:51.18:0,51,1068	0/0:26,0:26:78.27:0,78,1635	0/0:13,0:12:39.13:0,39,817	0/0:26,0:25:66.20:0,66,1336	0/0:12,0:12:33.11:0,33,698	0/0:14,0:14:39.11:0,39,748	0/0:21,0:21:60.21:0,60,1258	0/0:15,0:15:45.15:0,45,944	0/0:13,0:13:36.12:0,36,755	0/0:16,0:16:48.16:0,48,1006	0/0:8,0:8:24.08:0,24,503	0/0:15,0:15:42.13:0,42,844	1/1:1,9:10:30.10:868,30,0	1/1:0,21:21:60.21:1733,60,0	1/1:2,4:6:18.06:522,18,0
chr10	4284505	.	TGCTAACC	T	3026.15	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.713;DP=791;FS=11.217;HRun=0;HaplotypeScore=193.9509;InbreedingCoeff=0.9999;MQ=87.51;MQ0=0;MQRankSum=-9.988;QD=60.52;ReadPosRankSum=-0.620;VQSLOD=2.5996;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,33:33:81.28:2180,81,0	0/0:18,0:18:54.19:0,54,2108	0/0:28,0:28:73.90:0,74,3228	0/0:29,0:29:84.29:0,84,2884	0/0:45,0:45:99:0,135,5202	0/0:27,0:27:81.26:0,81,3279	0/0:24,0:24:72.25:0,72,2944	0/0:21,0:21:63.22:0,63,2511	0/0:30,0:30:90.31:0,90,3623	0/0:34,0:34:99:0,102,4166	0/0:24,0:24:72.24:0,72,2851	0/0:37,0:37:99:0,111,4554	0/0:27,0:27:78.27:0,78,3122	0/0:36,0:36:99:0,108,4194	0/0:41,0:41:99:0,123,5070	0/0:29,0:29:87.30:0,87,3524	1/1:0,17:17:36.12:968,36,0	0/0:33,0:33:93.32:0,93,3841	0/0:31,0:31:93.32:0,93,3518	0/0:28,0:28:84.29:0,84,3418	0/0:29,0:29:87.30:0,87,3617	0/0:22,0:22:66.23:0,66,2710	0/0:18,0:18:54.19:0,54,2150	0/0:45,0:45:99:0,126,5215	0/0:16,0:16:48.16:0,48,1910	0/0:27,0:27:81.28:0,81,3324	0/0:27,0:27:75.23:0,75,2943	0/0:15,0:15:45.15:0,45,1833
chr10	4284512	.	C	CT	802.21	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=10.601;DP=816;FS=3.644;HRun=0;HaplotypeScore=108.6480;InbreedingCoeff=0.9999;MQ=86.79;MQ0=0;MQRankSum=-10.947;QD=13.83;ReadPosRankSum=0.397;VQSLOD=5.1319;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:35,4:39:84.58:603,85,0	0/0:15,0:15:45.15:0,45,629	0/0:34,0:34:99:0,102,1381	0/0:24,0:24:72.23:0,72,962	0/0:39,0:39:99:0,114,1594	0/0:26,0:26:78.24:0,78,1071	0/0:26,0:26:75.21:0,75,997	0/0:29,0:29:84.27:0,84,1160	0/0:33,0:33:96.31:0,96,1314	0/0:34,0:34:99:0,102,1427	0/0:24,0:24:72.24:0,72,1001	0/0:38,0:38:99:0,114,1577	0/0:28,0:28:81.22:0,81,1079	0/0:38,0:38:99:0,108,1488	0/0:41,0:41:99:0,123,1701	0/0:33,0:33:93.30:0,93,1283	1/1:17,2:19:40.85:321,41,0	0/0:34,0:34:93.31:0,93,1300	0/0:30,0:30:87.28:0,87,1200	0/0:29,0:29:87.26:0,87,1181	0/0:33,0:33:99:0,99,1326	0/0:22,0:22:66.19:0,66,903	0/0:18,0:18:51.17:0,51,713	0/0:45,0:45:99:0,132,1804	0/0:18,0:18:54.16:0,54,737	0/0:27,0:27:81.26:0,81,1116	0/0:26,0:26:72.24:0,72,1006	0/0:14,0:14:42.14:0,42,587
chr10	4284543	.	TGTG	T	2171.87	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.063;DP=818;FS=2.516;HRun=0;HaplotypeScore=136.1061;InbreedingCoeff=0.9995;MQ=81.15;MQ0=0;MQRankSum=-4.448;QD=35.03;ReadPosRankSum=1.510;VQSLOD=4.5885;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,105,2051	0/0:12,0:12:33.11:0,33,748	0/0:30,0:30:78.23:0,78,1536	0/0:20,0:20:48.16:0,48,994	0/0:29,0:29:81.25:0,81,1709	0/0:30,0:30:90.31:0,90,2012	0/0:26,0:26:75.26:0,75,1697	0/0:31,0:31:90.28:0,90,1848	0/0:31,0:31:93.27:0,93,1967	0/0:30,0:30:81.27:0,81,1734	0/0:21,0:21:63.22:0,63,1338	0/0:31,0:31:87.27:0,87,1886	0/0:32,0:32:93.30:0,93,1976	0/0:32,0:32:96.30:0,96,2006	0/0:29,0:29:84.28:0,84,1807	0/0:41,0:41:99:0,120,2649	0/0:22,0:22:57.20:0,57,1251	0/0:46,0:46:99:0,126,2781	0/0:28,0:28:80.30:0,80,1638	0/0:31,0:31:93.32:0,93,2005	0/0:40,0:40:99:0,117,2387	0/0:26,0:26:72.25:0,72,1561	0/0:18,0:18:48.13:0,48,951	0/0:55,0:55:99:0,160,3583	0/0:23,0:23:66.23:0,66,1495	1/1:6,22:28:29.29:988,29,0	1/1:2,22:24:54.18:897,54,0	1/1:0,10:10:30.02:429,30,0
chr10	4285544	.	TAGTC	T	2115.26	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.306;DP=676;FS=2.953;HRun=0;HaplotypeScore=112.1479;InbreedingCoeff=0.9994;MQ=84.29;MQ0=0;MQRankSum=-4.055;QD=37.77;ReadPosRankSum=2.750;VQSLOD=3.9110;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,36:39:78.73:1481,79,0	0/0:9,0:9:27.07:0,27,672	0/0:22,0:22:57.14:0,57,1330	0/0:19,0:19:45.15:0,45,1078	0/0:37,0:37:99:0,108,2919	0/0:19,0:19:54.19:0,54,1479	0/0:27,0:27:75.24:0,75,1933	0/0:43,0:43:99:0,114,2911	0/0:21,0:21:54.19:0,54,1438	0/0:17,0:17:48.16:0,48,1259	0/0:20,0:20:57.20:0,57,1509	0/0:24,0:24:69.24:0,69,1881	0/0:26,0:26:72.25:0,72,1894	0/0:22,0:22:66.23:0,66,1793	0/0:24,0:24:69.24:0,69,1890	0/0:20,0:19:60.20:0,60,1587	1/1:1,16:17:39.13:755,39,0	0/0:19,0:19:51.17:0,51,1311	0/0:15,0:15:42.13:0,42,1085	0/0:37,0:37:99:0,111,3008	0/0:24,0:24:69.24:0,69,1810	0/0:23,0:23:66.23:0,66,1770	0/0:32,0:32:93.32:0,93,2522	0/0:21,0:21:60.21:0,60,1643	0/0:23,0:23:66.23:0,66,1797	0/0:30,0:30:87.30:0,87,2142	0/0:32,0:32:90.31:0,90,2449	0/0:14,0:14:42.14:0,42,1128
chr10	4286181	.	TG	T	2700.91	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=11.311;DP=805;FS=2.738;HRun=2;HaplotypeScore=79.6007;InbreedingCoeff=0.9999;MQ=84.81;MQ0=0;MQRankSum=-1.935;QD=33.34;ReadPosRankSum=2.555;VQSLOD=3.9503;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,138,2047	0/0:15,0:15:45.15:0,45,675	0/0:26,0:26:69.23:0,69,995	0/0:22,0:22:53.20:0,53,723	0/0:37,0:37:99:0,108,1578	0/0:21,0:21:63.21:0,63,944	0/0:26,0:26:75.25:0,75,1124	0/0:38,0:38:99:0,111,1626	0/0:27,0:27:75.25:0,75,1118	0/0:36,0:36:99:0,99,1466	0/0:22,0:22:60.20:0,60,898	0/0:26,0:26:78.21:0,78,1138	0/0:33,0:33:96.31:0,96,1416	0/0:24,0:24:72.24:0,72,1079	1/1:0,40:40:99:1402,108,0	0/0:27,0:27:81.27:0,81,1213	0/0:35,0:35:99:0,105,1511	1/1:0,22:22:60.20:779,60,0	0/0:22,0:22:63.21:0,63,945	0/0:37,0:37:99:0,111,1604	0/0:51,0:51:99:0,147,2181	0/0:24,0:24:72.24:0,72,1067	0/0:31,0:31:93.32:0,93,1394	0/0:30,0:30:90.30:0,90,1349	1/1:0,19:19:51.17:662,51,0	0/0:28,0:28:84.28:0,84,1239	0/0:29,0:28:87.27:0,87,1264	0/0:11,0:11:33.11:0,33,495
chr10	4286746	.	GC	G	1046.60	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.779;DP=687;FS=3.326;HRun=2;HaplotypeScore=65.1533;InbreedingCoeff=0.9847;MQ=84.96;MQ0=0;MQRankSum=-4.447;QD=29.07;ReadPosRankSum=-0.254;VQSLOD=3.0423;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,19:19:48.16:623,48,0	0/0:11,0:11:33.11:0,33,495	0/0:27,0:27:81.25:0,81,1151	0/0:15,0:15:44.95:0,45,591	0/0:35,0:35:99:0,102,1529	0/0:21,0:21:63.20:0,63,924	0/0:12,0:12:36.10:0,36,502	0/0:34,0:34:99:0,102,1528	0/0:21,0:21:63.21:0,63,944	0/0:21,0:21:63.20:0,63,902	0/0:28,0:28:84.28:0,84,1259	0/0:28,0:28:78.24:0,78,1127	0/0:29,0:29:87.29:0,87,1302	0/0:18,0:18:54.15:0,54,768	0/0:24,0:24:72.22:0,72,1055	0/0:23,0:22:69.23:0,69,1033	1/1:0,17:17:42.14:545,42,0	0/0:20,0:20:57.19:0,57,854	0/0:30,0:30:87.29:0,87,1303	0/0:44,0:44:99:0,132,1938	0/0:21,0:21:63.20:0,63,921	0/0:28,0:28:81.27:0,81,1213	0/0:30,0:30:90.30:0,90,1349	0/0:16,1:17:12.22:0,12,680	0/0:30,0:30:90.30:0,90,1346	0/0:29,0:29:84.27:0,84,1239	0/0:34,0:34:99:0,102,1521	0/0:21,0:21:63.21:0,63,944
chr10	4287049	.	GTA	G	2816.13	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=12.443;DP=686;FS=1.577;HRun=0;HaplotypeScore=85.7384;InbreedingCoeff=0.9991;MQ=75.95;MQ0=0;MQRankSum=-3.476;QD=37.55;ReadPosRankSum=2.669;VQSLOD=5.9983;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,49:49:99:1928,126,0	0/0:9,0:9:27.09:0,27,521	0/0:13,0:13:35.09:0,35,535	0/0:16,0:16:30.49:0,30,569	0/0:28,0:28:84.29:0,84,1621	0/0:14,0:14:39.13:0,39,753	0/0:25,0:25:72.25:0,72,1365	0/0:29,0:28:81.27:0,81,1529	0/0:25,0:25:72.25:0,72,1366	0/0:26,0:26:75.26:0,75,1442	0/0:13,0:13:39.13:0,39,752	0/0:28,0:28:84.27:0,84,1589	0/0:24,0:24:72.25:0,72,1375	0/0:24,0:24:69.24:0,69,1314	0/0:45,0:45:99:0,132,2531	0/0:15,0:15:45.15:0,45,852	1/1:0,26:26:66.22:1010,66,0	0/0:23,0:23:66.23:0,66,1273	0/0:23,0:23:66.22:0,66,1230	0/0:26,0:26:78.25:0,78,1473	0/0:41,0:41:99:0,123,2372	0/0:23,0:23:66.21:0,66,1242	0/0:28,0:28:84.29:0,84,1602	0/0:22,0:22:66.23:0,66,1274	0/0:15,0:15:45.15:0,45,857	0/0:27,0:27:78.26:0,78,1474	0/0:24,0:24:72.25:0,72,1380	0/0:25,0:25:75.26:0,75,1447
chr10	4288004	.	AT	A	1355.51	PASS	AB=0.914;AC=10;AF=0.179;AN=56;BaseQRankSum=3.650;DP=598;FS=2.128;HRun=11;HaplotypeScore=67.8757;InbreedingCoeff=0.8033;MQ=67.62;MQ0=5;MQRankSum=0.968;QD=11.79;ReadPosRankSum=-0.677;VQSLOD=3.2676;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,1:30:43.23:0,43,605	0/0:7,0:7:12.03:0,12,128	0/0:23,0:13:23.08:0,23,159	0/0:22,1:11:10.21:0,10,125	0/0:41,0:41:99:0,105,1113	0/0:19,1:22:38.18:0,38,579	0/0:18,1:20:35.34:0,35,565	1/1:5,23:27:65.90:539,66,0	0/0:17,0:17:45.07:0,45,468	0/0:31,0:30:78.20:0,78,830	0/1:15,2:17:1.16:1,0,399	0/1:13,1:14:6.62:7,0,133	0/0:26,2:28:22.92:0,23,630	0/0:13,0:13:30.01:0,30,304	1/1:2,14:16:32.93:271,33,0	0/0:11,0:11:30.08:0,30,320	0/0:27,0:27:72.07:0,72,731	1/1:3,15:18:30.49:331,30,0	0/0:15,0:15:33.08:0,33,352	0/0:16,1:17:20.48:0,20,411	0/0:15,0:15:42.08:0,42,432	0/0:21,0:23:62.85:0,63,629	0/0:23,1:24:41.52:0,42,647	0/0:18,2:19:26.47:0,26,480	1/1:5,17:22:44.94:369,45,0	0/0:3,0:29:70.62:0,71,364	0/0:4,0:24:54.47:0,54,300	0/0:4,0:22:48.80:0,49,279
chr10	4288499	.	G	GAA	3904.56	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=11.764;DP=764;FS=2.175;HRun=0;HaplotypeScore=94.6222;InbreedingCoeff=0.9989;MQ=79.14;MQ0=0;MQRankSum=-2.913;QD=54.23;ReadPosRankSum=2.908;VQSLOD=4.3141;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,117,1873	0/0:10,0:10:27.09:0,27,428	0/0:18,0:18:45.14:0,45,654	0/0:32,0:31:93.27:0,93,1340	0/0:28,0:28:81.25:0,81,1270	0/0:25,0:25:75.26:0,75,1224	0/0:35,0:35:99:0,105,1713	0/0:29,0:29:84.29:0,84,1371	0/0:37,0:37:99:0,111,1787	0/0:25,0:25:72.25:0,72,1175	0/0:13,0:13:39.13:0,39,636	0/0:27,0:27:81.26:0,81,1297	0/0:37,0:37:99:0,111,1776	0/0:32,0:32:96.33:0,96,1566	1/1:3,29:33:87.30:1757,87,0	0/0:31,0:31:93.30:0,93,1491	0/0:35,0:35:99:0,102,1585	1/1:1,21:22:63.17:1238,63,0	0/0:22,0:22:66.23:0,66,1075	0/0:32,0:32:93.30:0,93,1493	0/0:36,0:36:99:0,108,1754	0/0:31,0:31:93.32:0,93,1512	0/0:26,0:26:78.25:0,78,1234	0/0:35,0:35:99:0,105,1713	1/1:0,17:17:45.15:909,45,0	0/0:26,0:26:78.25:0,78,1248	0/0:23,0:23:69.24:0,69,1126	0/0:8,0:8:24.08:0,24,392
chr10	4288978	.	T	TTTATTTA	1278.21	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=0.382;DP=491;FS=1.820;HRun=0;HaplotypeScore=146.1333;InbreedingCoeff=0.4594;MQ=57.80;MQ0=17;MQRankSum=-6.348;QD=35.51;ReadPosRankSum=1.898;VQSLOD=3.1361;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:13,12:22:48.12:1335,48,0	0/0:6,0:6:18.01:0,18,280	0/0:12,0:6:6.02:0,6,100	0/0:10,0:5:9.02:0,9,126	0/0:32,0:31:80.26:0,80,1405	0/0:23,0:23:57.33:0,57,943	0/0:8,0:8:21.95:0,22,449	0/0:33,0:33:79.06:0,79,1159	0/0:11,0:11:19.82:0,20,372	0/0:17,0:16:39.90:0,40,635	0/0:20,0:19:51.01:0,51,934	0/0:12,0:12:33.52:0,34,585	0/0:16,0:16:45.04:0,45,864	0/0:15,0:13:32.95:0,33,590	0/0:26,0:26:39.32:0,39,618	0/0:16,0:15:42.94:0,43,838	0/0:24,0:22:7.75:0,8,108	0/0:18,0:18:30.10:0,30,561	0/0:22,0:21:54.97:0,55,1078	0/0:23,0:23:15.59:0,16,1110	0/0:7,0:7:17.98:0,18,234	0/0:16,0:16:45.01:0,45,733	0/0:16,0:15:38.95:0,39,660	0/0:13,0:13:26.88:0,27,537	0/0:11,0:11:26.07:0,26,357	0/0:32,0:31:32.92:0,33,376	0/0:16,0:16:0.39:0,0,118	0/1:9,0:7:48.52:49,0,59
chr10	4289160	.	TA	T	2741.47	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=11.830;DP=584;FS=8.977;HRun=9;HaplotypeScore=76.7895;InbreedingCoeff=0.8159;MQ=76.86;MQ0=4;MQRankSum=-3.505;QD=18.40;ReadPosRankSum=2.717;VQSLOD=3.8137;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:2.15:0,2,44	0/0:11,0:11:33.10:0,33,381	0/1:29,0:18:5.48:5,0,175	0/0:29,0:20:18.75:0,19,169	0/0:23,0:23:63.19:0,63,726	0/0:28,0:28:63.17:0,63,708	0/0:10,1:11:2.63:0,3,284	0/0:36,0:35:90.24:0,90,1012	0/0:16,0:16:39.09:0,39,430	0/0:25,0:25:72.21:0,72,831	0/0:20,0:20:57.17:0,57,658	0/0:16,0:16:45.12:0,45,509	0/0:25,0:25:72.19:0,72,811	0/0:20,0:20:54.16:0,54,620	1/1:3,19:22:57.02:522,57,0	0/0:21,0:21:57.16:0,57,648	0/0:11,0:11:1.90:0,2,24	1/1:2,11:13:38.98:348,39,0	0/0:17,0:16:36.10:0,36,408	0/0:27,0:28:78.05:0,78,871	0/0:24,1:25:44.75:0,45,769	0/0:17,0:17:48.14:0,48,554	0/0:25,0:25:66.20:0,66,761	0/0:18,0:18:48.13:0,48,543	1/1:1,20:21:60.03:549,60,0	1/1:1,26:27:40.42:624,40,0	1/1:1,26:27:75.04:686,75,0	1/1:0,10:10:21.01:192,21,0
chr10	4289168	.	AAC	A	289.41	PASS	AB=0.791;AC=3;AF=0.054;AN=56;BaseQRankSum=3.920;DP=575;FS=8.180;HRun=0;HaplotypeScore=93.3663;InbreedingCoeff=-0.0163;MQ=76.68;MQ0=4;MQRankSum=-2.133;QD=5.57;ReadPosRankSum=-4.339;VQSLOD=0.5892;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:6,6:12:12.30:201,0,12	0/0:11,0:11:33.11:0,33,547	0/1:28,0:16:8.84:9,0,167	0/0:29,0:21:17.36:0,17,235	0/0:24,0:24:72.18:0,72,1065	0/0:23,0:23:69.21:0,69,1087	0/0:10,0:10:29.84:0,30,459	0/0:36,0:35:99:0,99,1510	0/0:15,0:15:42.14:0,42,680	0/0:25,0:25:75.25:0,75,1223	0/0:20,0:20:60.19:0,60,969	0/0:17,0:17:51.14:0,51,781	0/0:25,0:25:72.23:0,72,1164	0/0:18,0:18:54.17:0,54,869	0/0:20,0:20:55.07:0,55,248	0/0:23,0:23:69.19:0,69,1056	0/1:7,5:12:93.54:175,0,94	0/0:15,0:15:35.15:0,35,184	0/0:13,0:12:36.11:0,36,572	0/0:28,0:28:81.25:0,81,1266	0/0:27,0:27:80.97:0,81,1217	0/0:16,0:16:48.16:0,48,796	0/0:23,0:23:66.15:0,66,1038	0/0:19,0:19:57.14:0,57,868	0/0:20,0:20:54.89:0,55,239	0/0:27,0:27:57.49:0,57,314	0/0:27,0:27:60.87:0,61,299	0/0:12,0:12:25.19:0,25,133
chr10	4289209	.	G	GAATTTTA	6034.38	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=1.153;DP=695;FS=0.543;HRun=0;HaplotypeScore=163.2455;InbreedingCoeff=0.8546;MQ=73.26;MQ0=0;MQRankSum=-11.597;QD=77.36;ReadPosRankSum=0.806;VQSLOD=5.3358;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:15,0:15:8.43:8,0,841	0/0:9,0:9:27.09:0,27,675	0/0:22,0:21:54.66:0,55,1289	0/0:24,0:22:48.12:0,48,1146	0/0:33,0:33:96.29:0,96,2383	0/0:39,0:39:99:0,108,2716	0/0:13,0:13:39.08:0,39,753	0/0:35,0:35:96.28:0,96,2206	0/0:22,0:22:60.21:0,60,1557	0/0:33,0:33:90.31:0,90,2283	0/0:31,0:31:84.22:0,84,2094	0/0:19,0:19:57.18:0,57,1420	0/0:32,0:32:90.30:0,90,2284	0/0:21,0:21:63.20:0,63,1581	1/1:6,12:21:48.16:1799,48,0	0/0:22,0:22:63.22:0,63,1633	0/0:18,0:18:45.13:0,45,1112	1/1:4,11:17:45.15:1685,45,0	0/0:16,0:16:48.16:0,48,1164	0/0:39,0:39:99:0,114,2847	0/0:36,0:36:99:0,99,2465	0/0:25,0:25:69.22:0,69,1738	0/0:35,0:35:99:0,102,2476	0/0:19,0:19:57.12:0,57,1309	1/1:3,19:25:66.23:2542,66,0	0/0:32,0:32:93.25:0,93,2130	0/0:28,0:28:75.26:0,75,1918	0/0:14,0:14:36.08:0,36,877
chr10	4290616	.	C	CA	966.46	PASS	AB=0.902;AC=19;AF=0.339;AN=56;BaseQRankSum=2.074;DP=478;FS=0.000;HRun=14;HaplotypeScore=64.3793;InbreedingCoeff=0.2529;MQ=62.00;MQ0=5;MQRankSum=-1.322;QD=4.18;ReadPosRankSum=0.177;VQSLOD=0.7626;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,2:32:62.81:335,63,0	0/1:6,1:8:11.22:11,0,51	0/1:13,0:10:3.22:3,0,40	0/0:11,0:5:1.29:0,1,13	0/0:29,0:31:33.70:0,34,325	0/0:16,0:16:29.54:0,30,192	0/1:9,3:13:46.45:46,0,76	0/0:11,0:21:26.49:0,26,99	0/0:12,0:13:25.59:0,26,160	0/0:20,0:20:41.30:0,41,269	0/0:15,0:17:38.61:0,39,229	0/1:14,0:14:1.10:1,0,154	0/0:17,0:17:30.14:0,30,174	0/0:19,0:19:26.76:0,27,190	1/1:9,0:9:18.82:81,19,0	0/0:16,2:21:15.15:0,15,203	0/0:2,0:16:24.42:0,24,70	0/1:20,0:20:23.07:113,0,23	0/1:14,2:16:15.26:15,0,131	0/0:18,0:19:37.37:0,37,236	0/0:9,0:9:17.68:0,18,115	0/0:14,1:16:6.65:0,7,150	0/1:18,2:21:12.67:13,0,168	0/1:13,1:15:6.60:7,0,82	1/1:19,0:19:1.93:103,2,0	1/1:6,10:16:7.73:192,8,0	0/1:9,9:18:48.86:100,0,49	1/1:5,7:12:14.84:120,15,0
chr10	4290630	.	A	AT	1046.42	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=-1.646;DP=474;FS=1.309;HRun=1;HaplotypeScore=62.3022;InbreedingCoeff=0.8799;MQ=71.73;MQ0=3;MQRankSum=0.270;QD=17.44;ReadPosRankSum=2.722;VQSLOD=4.0836;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:30:67.73:0,68,355	0/0:6,0:6:14.07:0,14,158	0/0:17,0:13:31.46:0,31,277	0/0:19,0:12:14.97:0,15,123	0/0:33,0:33:91.28:0,91,948	0/0:15,0:15:42.08:0,42,481	0/0:11,0:11:16.18:0,16,240	0/0:23,0:24:62.47:0,62,500	0/0:13,0:13:38.99:0,39,408	0/0:21,0:21:63.10:0,63,722	0/0:17,0:16:44.90:0,45,481	0/0:14,0:14:38.59:0,39,438	0/0:15,0:16:41.95:0,42,436	0/0:14,0:14:38.63:0,39,428	1/1:1,10:12:21.05:249,21,0	0/0:20,0:20:51.35:0,51,544	0/0:15,0:15:38.25:0,38,236	1/1:5,18:23:38.23:468,38,0	0/0:16,0:15:39.88:0,40,415	0/0:21,0:21:59.98:0,60,642	0/0:8,0:8:24.05:0,24,279	0/0:18,0:19:53.04:0,53,554	0/0:16,0:16:37.21:0,37,444	0/0:12,0:12:24.40:0,24,250	1/1:2,15:18:19.23:469,19,0	0/0:15,0:15:15.12:0,15,161	0/0:19,0:20:23.20:0,23,269	0/1:7,0:7:2.01:2,0,9
chr10	4290777	.	T	TC	2523.36	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-7.843;DP=608;FS=1.082;HRun=2;HaplotypeScore=59.0639;InbreedingCoeff=0.9886;MQ=75.39;MQ0=0;MQRankSum=-1.380;QD=38.23;ReadPosRankSum=1.471;VQSLOD=4.2388;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:34:99:0,99,1274	0/0:4,0:4:12.04:0,12,155	0/0:17,0:16:41.78:0,42,459	0/0:11,0:11:28.17:0,28,288	0/0:31,0:31:87.24:0,87,1101	0/0:26,0:26:78.22:0,78,995	0/0:26,0:26:72.22:0,72,921	0/0:35,0:35:99:0,105,1336	0/0:20,0:20:60.19:0,60,778	0/0:20,0:20:54.17:0,54,689	0/0:19,0:19:57.19:0,57,740	0/0:16,0:16:45.14:0,45,569	0/0:16,0:16:45.15:0,45,584	0/0:19,0:19:57.19:0,57,740	0/0:18,0:18:54.18:0,54,701	0/0:23,0:23:66.21:0,66,856	0/0:20,0:20:57.19:0,57,740	0/0:17,0:16:48.16:0,48,621	0/0:13,0:13:39.12:0,39,489	0/0:34,0:34:99:0,102,1310	0/0:22,0:22:66.19:0,66,840	0/0:31,0:31:93.30:0,93,1207	0/0:26,0:26:75.24:0,75,972	0/0:23,0:23:54.13:0,54,682	0/0:20,0:20:60.18:0,60,766	1/1:2,27:30:84.27:1228,84,0	1/1:2,22:24:66.22:989,66,0	1/1:0,12:12:30.10:450,30,0
chr10	4292383	.	ATTTTCTTCCTGAG	A	6259.76	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=11.468;DP=638;FS=4.173;HRun=0;HaplotypeScore=228.8337;InbreedingCoeff=0.9996;MQ=88.00;MQ0=0;MQRankSum=-11.624;QD=89.43;ReadPosRankSum=4.671;VQSLOD=4.5027;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:96.32:0,96,6062	0/0:9,0:9:27.09:0,27,1786	0/0:28,0:28:78.05:0,78,3611	0/0:20,0:20:56.83:0,57,3052	0/0:21,0:21:63.22:0,63,4094	0/0:24,0:24:72.25:0,72,4646	0/0:16,0:16:48.16:0,48,3036	0/0:35,0:35:99:0,99,6039	0/0:29,0:29:87.29:0,87,4870	0/0:29,0:29:87.30:0,87,5673	0/0:17,0:17:48.16:0,48,3005	0/0:21,0:21:61.09:0,61,3890	0/0:19,0:19:54.19:0,54,3399	0/0:23,0:23:69.21:0,69,3936	0/0:32,0:32:96.32:0,96,5807	0/0:24,0:24:72.25:0,72,4704	0/0:24,0:24:69.24:0,69,4592	0/0:13,0:13:39.10:0,39,2314	0/0:32,0:32:96.32:0,96,5997	0/0:21,0:21:63.22:0,63,4047	0/0:29,0:29:87.29:0,87,5264	0/0:14,0:14:42.14:0,42,2592	0/0:20,0:20:60.21:0,60,3999	0/0:16,0:16:48.15:0,48,2922	0/0:20,0:20:60.21:0,60,3665	1/1:5,18:23:54.19:2210,54,0	1/1:4,22:26:51.17:2086,51,0	1/1:0,21:21:48.16:1964,48,0
chr10	4292624	.	T	TCAAGTATA	1798.27	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=6.842;DP=541;FS=0.948;HRun=0;HaplotypeScore=140.3905;InbreedingCoeff=0.9581;MQ=80.86;MQ0=0;MQRankSum=-5.955;QD=94.65;ReadPosRankSum=1.329;VQSLOD=4.1849;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,120,3577	0/0:11,0:11:33.11:0,33,920	0/0:21,0:21:63.20:0,63,1622	0/0:13,0:13:36.08:0,36,917	0/0:20,0:20:57.20:0,57,1636	0/0:21,0:21:63.22:0,63,1796	0/0:15,0:15:45.13:0,45,1209	0/0:23,0:23:69.23:0,69,1928	0/0:26,0:26:78.25:0,78,2250	0/0:21,0:21:63.21:0,63,1816	0/0:15,0:15:42.14:0,42,1164	0/0:18,0:18:51.16:0,51,1456	0/0:20,0:20:60.20:0,60,1753	0/0:21,0:21:63.18:0,63,1773	1/1:1,7:8:24.08:915,24,0	0/0:24,0:24:66.22:0,66,1824	0/0:32,0:32:93.31:0,93,2746	1/1:2,2:4:5.91:245,6,0	0/0:25,0:25:72.24:0,72,2013	0/0:12,0:12:33.11:0,33,1000	0/0:24,0:24:72.25:0,72,2180	0/0:16,0:16:48.16:0,48,1405	0/0:19,0:19:57.18:0,57,1628	0/0:30,0:30:90.30:0,90,2556	1/1:1,6:7:21.07:772,21,0	0/0:18,0:18:54.19:0,54,1580	0/0:20,0:20:57.20:0,57,1620	0/0:14,0:14:42.14:0,42,1262
chr10	4292626	.	G	GTGTT	824.82	PASS	AB=0.571;AC=5;AF=0.089;AN=56;BaseQRankSum=6.777;DP=531;FS=0.970;HRun=0;HaplotypeScore=95.8732;InbreedingCoeff=0.8109;MQ=79.09;MQ0=0;MQRankSum=-6.618;QD=41.24;ReadPosRankSum=0.229;VQSLOD=3.6659;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,126,2516	0/0:10,0:10:30.09:0,30,589	0/0:19,0:19:54.18:0,54,1077	0/0:12,0:12:33.11:0,33,642	0/0:20,0:20:60.15:0,60,1140	0/0:22,0:22:63.22:0,63,1285	0/0:16,0:16:45.12:0,45,848	0/0:23,0:23:69.24:0,69,1407	0/0:25,0:25:75.24:0,75,1534	0/0:22,0:22:66.22:0,66,1327	0/0:15,0:15:42.14:0,42,848	0/0:17,0:17:51.16:0,51,1020	0/0:20,0:20:60.21:0,60,1238	0/0:19,0:19:57.20:0,57,1191	1/1:1,7:8:18.09:445,18,0	0/0:21,0:21:63.19:0,63,1233	0/0:32,0:32:96.28:0,96,1931	1/1:2,2:4:8.99:155,9,0	0/0:24,0:24:72.25:0,72,1493	0/0:12,0:12:36.11:0,36,717	0/0:24,0:24:72.25:0,72,1510	0/0:17,0:17:45.15:0,45,943	0/0:19,0:19:57.20:0,57,1164	0/0:28,0:28:84.29:0,84,1744	0/1:2,6:8:4.79:346,0,5	0/0:17,0:17:51.18:0,51,1059	0/0:20,0:20:60.15:0,60,1153	0/0:14,0:14:42.14:0,42,880
chr10	4292778	.	TGTTTGGTTTGGTTTGGTTTGGTTTG	T	948.79	PASS	AB=0.679;AC=1;AF=0.018;AN=56;BaseQRankSum=4.123;DP=706;FS=1.641;HRun=0;HaplotypeScore=410.8229;InbreedingCoeff=-0.0191;MQ=72.62;MQ0=16;MQRankSum=-3.990;QD=24.97;ReadPosRankSum=0.206;VQSLOD=0.7506;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:20,18:38:92.80:1023,0,93	0/0:11,0:11:30.08:0,30,2963	0/0:43,0:31:21.92:0,22,580	0/0:43,0:30:32.37:0,32,757	0/0:40,0:40:81.28:0,81,6925	0/0:28,0:28:72.24:0,72,6096	0/0:20,0:20:45.14:0,45,3810	0/0:25,0:25:33.11:0,33,2244	0/0:17,0:17:42.14:0,42,3854	0/0:30,0:30:63.22:0,63,5289	0/0:18,0:17:51.18:0,51,4349	0/0:24,0:24:36.12:0,36,3597	0/0:22,0:22:48.16:0,48,4259	0/0:23,0:23:48.16:0,48,4637	0/0:27,0:27:69.24:0,69,7375	0/0:27,0:27:69.24:0,69,6376	0/0:17,0:34:48.16:0,48,3281	0/0:15,0:15:27.09:0,27,3099	0/0:34,0:34:54.18:0,54,4463	0/0:24,0:24:45.13:0,45,3693	0/0:24,0:25:45.15:0,45,3672	0/0:12,0:12:21.07:0,21,1472	0/0:23,0:23:48.16:0,48,4316	0/0:27,0:27:51.18:0,51,5222	0/0:17,0:17:36.12:0,36,3328	0/0:21,0:21:48.16:0,48,3757	0/0:15,0:28:48.16:0,48,4449	0/0:6,0:10:15.05:0,15,1564
chr10	4293160	.	G	GA	1200.85	PASS	AB=0.751;AC=6;AF=0.107;AN=56;BaseQRankSum=8.059;DP=737;FS=40.095;HRun=1;HaplotypeScore=76.0185;InbreedingCoeff=0.6169;MQ=83.83;MQ0=0;MQRankSum=-9.383;QD=12.91;ReadPosRankSum=0.214;VQSLOD=0.3831;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,19:20:29.24:441,29,0	0/0:12,0:12:36.12:0,36,467	0/0:23,0:24:63.20:0,63,816	0/0:22,0:22:37.81:0,38,662	0/0:28,0:28:81.26:0,81,1051	0/0:23,0:23:63.20:0,63,818	0/0:27,0:27:78.25:0,78,1013	0/0:35,0:35:96.30:0,96,1234	0/0:17,0:17:51.15:0,51,648	0/0:29,0:29:81.18:0,81,1028	0/0:16,0:16:42.14:0,42,545	0/0:33,0:33:93.30:0,93,1207	0/0:28,0:28:84.27:0,84,1091	0/0:32,0:32:96.30:0,96,1232	0/0:39,0:39:99:0,114,1480	0/0:21,0:21:63.19:0,63,805	1/1:1,8:9:15.03:188,15,0	0/0:35,0:35:99:0,105,1342	0/0:26,0:26:69.21:0,69,880	0/0:26,0:26:78.25:0,78,1012	0/0:63,0:63:99:0,190,2454	0/0:19,0:19:48.16:0,48,623	0/0:31,0:31:79.12:0,79,997	0/0:32,0:32:96.31:0,96,1246	0/0:20,0:20:60.20:0,60,779	0/1:22,17:39:99:637,0,691	0/1:19,6:25:69.54:70,0,550	0/0:6,0:6:18.06:0,18,234
chr10	4293488	.	CG	C	1601.89	PASS	AB=1.000;AC=7;AF=0.135;AN=52;BaseQRankSum=7.960;DP=496;FS=3.168;HRun=5;HaplotypeScore=73.1213;InbreedingCoeff=0.7905;MQ=67.99;MQ0=10;MQRankSum=2.428;QD=17.22;ReadPosRankSum=2.383;VQSLOD=3.3765;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/0:14,0:14:34.15:0,34,398	0/0:16,0:9:3.80:0,4,120	0/1:17,0:12:16.22:16,0,84	0/0:16,0:16:44.99:0,45,514	0/0:13,0:13:33.09:0,33,420	0/0:19,0:19:45.91:0,46,536	0/0:25,0:22:36.16:0,36,554	0/0:14,0:14:36.07:0,36,426	0/0:22,0:22:60.15:0,60,735	0/0:8,0:8:19.73:0,20,208	0/0:20,0:20:37.22:0,37,413	0/0:12,0:12:30.04:0,30,340	0/0:25,0:25:66.18:0,66,837	1/1:9,18:27:65.85:716,66,0	0/0:18,0:18:39.13:0,39,520	./.	1/1:6,24:30:57.10:609,57,0	0/0:17,0:16:47.97:0,48,545	0/0:22,0:21:54.48:0,54,660	0/0:27,0:27:62.69:0,63,746	0/0:16,0:16:30.66:0,31,345	0/0:18,0:17:41.88:0,42,491	0/0:40,0:40:92.83:0,93,1052	1/1:0,18:18:36.10:406,36,0	0/0:12,0:13:28.36:0,28,314	0/0:22,0:22:60.55:0,61,666	0/0:5,0:5:15.01:0,15,172
chr10	4293492	.	GGA	G	226.33	PASS	AB=0.983;AC=6;AF=0.115;AN=52;BaseQRankSum=10.252;DP=514;FS=1.979;HRun=0;HaplotypeScore=87.8361;InbreedingCoeff=0.1904;MQ=69.13;MQ0=9;MQRankSum=0.472;QD=1.80;ReadPosRankSum=2.727;VQSLOD=1.6409;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:14,0:14:33.94:0,34,592	0/1:22,0:13:1.36:1,0,229	0/1:25,0:15:4.80:5,0,193	0/0:18,0:18:41.66:0,42,771	0/0:13,0:13:33.10:0,33,603	0/0:17,0:17:50.97:0,51,819	0/0:23,0:21:42.30:0,42,921	0/0:15,0:15:42.10:0,42,688	0/0:21,0:21:63.16:0,63,1034	0/0:9,0:9:23.97:0,24,322	0/0:19,0:19:46.32:0,46,659	0/0:15,0:15:41.97:0,42,590	0/0:23,0:23:69.14:0,69,1190	0/1:26,2:28:37.82:167,0,38	0/0:14,0:14:39.13:0,39,767	./.	1/1:25,3:28:2.02:147,2,0	0/0:20,0:19:57.04:0,57,879	0/0:25,0:24:66.82:0,67,1073	0/0:25,0:25:65.67:0,66,1065	0/0:16,0:16:32.98:0,33,527	0/0:20,0:19:47.09:0,47,790	0/0:38,0:38:79.89:0,80,1547	0/1:21,0:21:3.18:3,0,64	0/0:13,0:13:18:0,18,280	0/0:24,0:24:42.13:0,42,533	0/0:5,0:5:14.99:0,15,144
chr10	4295504	.	G	GT	632.68	PASS	AB=0.944;AC=3;AF=0.054;AN=56;BaseQRankSum=-4.759;DP=531;FS=22.763;HRun=10;HaplotypeScore=56.3278;InbreedingCoeff=0.6536;MQ=75.17;MQ0=0;MQRankSum=-0.099;QD=13.75;ReadPosRankSum=0.830;VQSLOD=1.8141;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,24:29:50.44:727,50,0	0/0:7,0:7:20.98:0,21,172	0/1:16,1:15:3.80:4,0,102	0/0:10,0:9:8.01:0,8,52	0/0:20,0:20:47.93:0,48,394	0/0:21,1:22:21.95:0,22,387	0/0:8,0:8:17.98:0,18,148	0/0:26,0:26:59.88:0,60,488	0/0:18,0:18:32.92:0,33,268	0/0:21,0:22:52.95:0,53,425	0/0:27,0:29:75.96:0,76,601	0/0:23,0:24:61.90:0,62,491	0/0:13,0:13:29.96:0,30,246	0/0:23,0:23:59.90:0,60,489	0/0:27,0:28:60.75:0,61,479	0/0:20,0:20:44.91:0,45,366	0/0:2,0:18:26.48:0,26,77	0/0:18,0:18:38.90:0,39,316	0/0:22,0:22:44.92:0,45,369	0/0:27,0:27:59.86:0,60,490	0/0:8,0:8:14.96:0,15,123	0/0:9,0:9:17.97:0,18,146	0/0:16,0:17:37.96:0,38,295	0/0:16,0:16:32.93:0,33,271	0/0:15,0:15:13.14:0,13,268	0/0:20,0:20:53.80:0,54,432	0/0:25,0:25:41.92:0,42,345	0/0:18,1:19:21.96:0,22,387
chr10	4296770	.	C	CA	586.01	PASS	AB=0.581;AC=3;AF=0.054;AN=56;BaseQRankSum=-6.376;DP=549;FS=5.074;HRun=8;HaplotypeScore=53.8287;InbreedingCoeff=0.4141;MQ=67.19;MQ0=3;MQRankSum=0.623;QD=17.24;ReadPosRankSum=-0.047;VQSLOD=3.3790;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:69.01:0,69,626	0/0:5,0:5:11.99:0,12,105	0/0:20,0:16:35.94:0,36,319	0/0:16,0:12:5:0,5,124	0/0:17,1:18:10.40:0,10,350	0/0:18,0:18:48.02:0,48,439	0/0:15,0:15:29.99:0,30,268	0/0:27,0:27:56.99:0,57,513	0/0:26,0:26:66.03:0,66,604	0/0:28,0:28:72.01:0,72,656	0/0:19,0:19:54.02:0,54,494	0/0:17,0:17:39:0,39,353	0/0:16,0:16:39:0,39,352	0/0:27,0:27:81.01:0,81,730	0/0:21,0:21:47.98:0,48,427	0/0:13,1:14:4.40:0,4,295	0/0:38,0:38:99:0,105,943	0/0:18,1:19:13.39:0,13,372	0/0:30,0:30:72:0,72,655	0/0:12,1:13:1.37:0,1,259	0/0:18,0:18:33:0,33,302	0/0:17,0:17:42.01:0,42,380	1/1:2,14:16:33.10:381,33,0	0/1:5,13:18:18.82:310,0,19	0/0:15,1:16:4.30:0,4,283	0/0:19,0:19:48.02:0,48,439	0/0:18,0:18:51.03:0,51,466	0/0:13,0:13:39.02:0,39,357
chr10	4296913	.	AT	A	1046.29	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=10.191;DP=536;FS=3.547;HRun=11;HaplotypeScore=55.7285;InbreedingCoeff=0.8557;MQ=66.08;MQ0=5;MQRankSum=1.575;QD=12.61;ReadPosRankSum=4.334;VQSLOD=3.5432;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,41:47:99:991,122,0	0/0:8,0:9:23.93:0,24,238	0/0:14,0:9:14.08:0,14,152	0/0:6,0:5:0.09:0,0,20	0/0:26,0:25:66.13:0,66,691	0/0:19,0:19:42.10:0,42,441	0/0:17,0:16:27:0,27,274	0/0:29,0:29:77.88:0,78,787	0/0:14,0:14:36.08:0,36,377	0/0:22,0:21:51.13:0,51,543	0/0:17,0:17:45.08:0,45,459	0/0:12,1:13:11.45:0,11,327	0/0:10,0:10:26.88:0,27,262	0/0:13,0:13:30.05:0,30,305	0/0:14,0:15:35.84:0,36,344	0/0:11,0:12:35.92:0,36,360	1/1:5,0:35:61.10:177,61,0	0/0:20,1:22:32.31:0,32,522	0/0:26,0:26:57.10:0,57,583	0/0:21,0:21:55.01:0,55,571	0/0:18,0:18:38.76:0,39,380	0/0:16,0:16:39.09:0,39,408	0/0:15,0:15:36.05:0,36,369	0/0:12,0:14:24.23:0,24,221	0/0:20,0:20:42.08:0,42,433	0/0:21,1:23:41.36:0,41,629	0/0:19,0:18:51.05:0,51,528	0/0:22,0:22:57.14:0,57,608
chr10	4297029	.	G	GT	1725.38	PASS	AB=0.800;AC=7;AF=0.125;AN=56;BaseQRankSum=-8.571;DP=513;FS=3.942;HRun=9;HaplotypeScore=53.3928;InbreedingCoeff=0.7935;MQ=74.96;MQ0=0;MQRankSum=-1.263;QD=24.65;ReadPosRankSum=0.895;VQSLOD=4.5115;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:32:86.01:0,86,735	0/1:3,1:4:20.03:27,0,20	0/0:18,0:18:6.61:0,7,138	0/0:14,0:12:9.52:0,10,155	0/0:14,0:14:26.96:0,27,231	0/0:16,0:16:41.99:0,42,365	0/0:15,0:15:35.98:0,36,313	0/0:30,0:30:65.97:0,66,573	0/0:14,0:14:35.96:0,36,308	0/0:21,0:21:56.97:0,57,493	0/0:17,0:17:44.98:0,45,391	0/0:13,0:13:35.99:0,36,312	0/0:9,0:9:23.99:0,24,208	0/0:22,0:22:50.97:0,51,443	1/1:0,21:21:60.16:664,60,0	0/0:16,0:16:38.98:0,39,338	0/0:37,0:38:99:0,107,917	1/1:0,26:26:60.14:652,60,0	0/0:28,0:28:71.94:0,72,616	0/0:17,0:17:44.99:0,45,391	0/0:14,0:14:32.98:0,33,286	0/0:17,0:17:35.97:0,36,312	0/0:13,0:13:35.99:0,36,313	0/0:13,0:13:13.90:0,14,264	1/1:1,18:19:48.13:531,48,0	0/0:14,0:14:35.98:0,36,312	0/0:26,0:26:71.97:0,72,624	0/0:10,0:10:29.99:0,30,260
chr10	4297557	.	CGTGTGT	C	301.03	PASS	AB=0.749;AC=4;AF=0.071;AN=56;BaseQRankSum=4.794;DP=593;FS=0.000;HRun=0;HaplotypeScore=152.3175;InbreedingCoeff=0.3043;MQ=54.71;MQ0=13;MQRankSum=-4.350;QD=6.27;ReadPosRankSum=2.299;VQSLOD=2.0152;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:6:0,6,99	0/0:7,0:7:15.03:0,15,379	0/0:20,0:9:12.04:0,12,338	0/0:11,0:9:10.28:0,10,186	0/0:22,0:22:57.06:0,57,1478	0/0:19,0:19:45.15:0,45,1441	0/0:24,0:24:60.19:0,60,1739	0/0:27,0:25:54.18:0,54,1278	0/0:11,0:11:30.06:0,30,686	0/0:28,0:25:75.23:0,75,1732	0/0:16,0:15:39.13:0,39,1161	0/0:25,0:24:60.19:0,60,1576	0/0:17,0:16:36.12:0,36,988	0/0:21,0:20:54.14:0,54,1340	0/1:11,4:14:14.37:45,0,14	0/0:14,0:14:39.13:0,39,1234	0/0:30,0:30:18.66:0,19,301	1/1:13,3:16:3.96:263,4,0	0/0:20,0:18:45.15:0,45,1248	0/0:13,0:13:30.10:0,30,960	0/0:64,0:61:99:0,153,4130	0/0:17,0:17:48.15:0,48,1352	0/0:13,0:13:36.08:0,36,890	0/0:47,0:46:99:0,117,3248	0/1:10,7:17:56.33:97,0,56	0/0:32,0:32:91.15:0,91,2380	0/0:17,0:17:39.04:0,39,1063	0/0:5,0:5:12:0,12,323
chr10	4297569	.	TGCGCGCGCGCGCGC	T	1763.98	PASS	AB=0.784;AC=8;AF=0.148;AN=54;BaseQRankSum=7.464;DP=564;FS=0.794;HRun=0;HaplotypeScore=214.2174;InbreedingCoeff=0.7489;MQ=51.37;MQ0=18;MQRankSum=-8.093;QD=18.57;ReadPosRankSum=2.330;VQSLOD=2.6812;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:6,18:24:0:0,0,0	0/0:7,0:7:18.53:0,19,996	0/0:6,0:3:2.96:0,3,27	./.	0/0:21,0:20:39.12:0,39,1650	0/0:20,0:20:48.16:0,48,2651	0/0:24,0:24:63.20:0,63,2772	0/0:27,0:22:51.83:0,52,1427	0/0:10,0:11:20.95:0,21,1065	0/0:27,0:24:66.20:0,66,3395	0/0:19,0:18:48.16:0,48,2499	0/0:23,0:22:51.13:0,51,2211	0/0:16,0:15:33.11:0,33,1353	0/0:20,0:19:45.14:0,45,1820	1/1:10,0:13:12.93:297,13,0	0/0:13,0:13:39.12:0,39,2048	0/1:28,0:28:23.85:223,0,24	1/1:6,0:15:24.08:894,24,0	0/0:19,0:16:44.18:0,44,1658	0/0:14,0:14:29.01:0,29,1548	0/0:61,0:59:99:0,129,6458	0/0:19,0:20:45.14:0,45,2327	0/0:13,0:13:30.08:0,30,1433	0/0:45,0:44:99:0,115,5771	1/1:9,0:12:21.54:494,22,0	0/0:33,0:33:80.65:0,81,3371	0/0:19,0:18:28.50:0,28,1263	0/0:7,0:7:18.06:0,18,585
chr10	4297571	.	CGCGCGCGCGCGCGCGTGTGTGT	C	2151.89	PASS	AB=1.000;AC=8;AF=0.148;AN=54;BaseQRankSum=6.050;DP=538;FS=0.000;HRun=0;HaplotypeScore=273.0170;InbreedingCoeff=0.7492;MQ=51.37;MQ0=19;MQRankSum=-7.797;QD=25.02;ReadPosRankSum=2.245;VQSLOD=2.2469;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:23:0:0,0,0	0/0:7,0:7:18.53:0,19,1168	0/0:5,0:3:2.96:0,3,27	./.	0/0:19,0:18:42.13:0,42,2246	0/0:21,0:21:51.18:0,51,3913	0/0:26,0:26:69.22:0,69,3414	0/0:26,0:21:56.64:0,57,1448	0/0:9,0:9:20.97:0,21,1380	0/0:25,0:22:66.20:0,66,4253	0/0:19,0:18:48.16:0,48,3216	0/0:24,0:23:54.14:0,54,3023	0/0:15,0:14:33.11:0,33,1767	0/0:19,0:18:45.14:0,45,2386	1/1:5,2:8:12.04:429,12,0	0/0:13,0:13:39.12:0,39,2768	0/1:29,0:29:16.47:16,0,120	1/1:9,3:12:24.08:1096,24,0	0/0:19,0:16:44.18:0,44,1826	0/0:13,0:13:29.33:0,29,1953	0/0:57,0:54:99:0,132,8407	0/0:19,0:18:45.14:0,45,2979	0/0:12,0:12:30.08:0,30,1960	0/0:47,0:46:99:0,120,7684	1/1:5,6:11:21.07:753,21,0	0/0:29,0:29:79.90:0,80,4097	0/0:18,0:17:28.70:0,29,1602	0/0:7,0:7:18.06:0,18,634
chr10	4297575	.	CGCGCGCGCGCGT	C	1520.62	PASS	AB=1.000;AC=9;AF=0.167;AN=54;BaseQRankSum=7.922;DP=521;FS=4.986;HRun=0;HaplotypeScore=184.8700;InbreedingCoeff=0.8906;MQ=50.91;MQ0=22;MQRankSum=-8.384;QD=17.89;ReadPosRankSum=2.879;VQSLOD=2.2439;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:20,0:19:0:0,0,0	0/0:8,0:8:18.53:0,19,828	./.	0/0:5,0:1:3.01:0,3,78	0/0:17,0:16:33.11:0,33,1285	0/0:22,0:22:51.17:0,51,2485	0/0:29,0:29:75.20:0,75,2446	0/0:26,0:21:51.29:0,51,947	0/0:9,0:9:20.93:0,21,931	0/0:25,0:22:66.23:0,66,2950	0/0:20,0:19:51.17:0,51,2243	0/0:24,0:23:54.17:0,54,2027	0/0:13,0:12:27.02:0,27,1084	0/0:16,0:15:42.13:0,42,1393	1/1:9,0:8:12.04:223,12,0	0/0:12,0:12:36.11:0,36,1587	1/1:6,26:32:12.51:441,13,0	1/1:12,0:12:24.08:647,24,0	0/0:18,0:15:39.11:0,39,1144	0/0:14,0:14:32.29:0,32,1307	0/0:54,0:52:99:0,129,5400	0/0:17,0:16:42.14:0,42,1910	0/0:11,0:11:27.09:0,27,1204	0/0:43,0:42:99:0,114,4996	1/1:12,0:11:21.07:361,21,0	0/0:27,0:27:50.83:0,51,2262	0/0:15,0:14:25.83:0,26,854	0/0:7,0:7:18.02:0,18,409
chr10	4297585	.	CGTGT	C	609.98	PASS	AB=0.926;AC=12;AF=0.231;AN=52;BaseQRankSum=6.010;DP=532;FS=3.821;HRun=0;HaplotypeScore=117.2159;InbreedingCoeff=0.4152;MQ=49.38;MQ0=25;MQRankSum=-2.612;QD=4.42;ReadPosRankSum=2.612;VQSLOD=1.9517;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:10,0:10:15.52:0,16,310	./.	0/0:16,0:2:3.48:0,3,41	0/0:20,0:19:26.62:0,27,487	0/0:19,0:21:38.87:0,39,831	0/1:25,1:26:52.39:52,0,533	0/0:24,0:17:27.09:0,27,428	0/0:10,0:10:15.52:0,16,309	0/0:24,0:21:39.11:0,39,793	0/0:19,0:18:36.10:0,36,699	0/0:20,0:20:24.08:0,24,464	0/0:16,0:15:19.71:0,20,494	0/0:12,0:11:21.05:0,21,404	0/1:13,0:13:37.61:38,0,178	0/0:10,0:10:24.04:0,24,431	1/1:27,0:27:10.54:52,11,0	0/1:18,0:18:57.16:57,0,148	0/0:15,0:14:16.84:0,17,241	0/0:14,0:14:24.08:0,24,476	0/0:52,0:52:66.08:0,66,1305	0/0:14,0:13:15.89:0,16,470	0/0:14,0:14:30.06:0,30,503	0/0:44,0:42:72.09:0,72,1439	1/1:13,0:12:5.62:53,6,0	0/1:17,9:25:42.42:385,0,42	1/1:9,3:11:3.01:48,3,0	1/1:2,0:3:6.01:76,6,0
chr10	4298371	.	T	TTTA	570.81	PASS	AB=0.960;AC=7;AF=0.125;AN=56;BaseQRankSum=3.794;DP=369;FS=4.804;HRun=0;HaplotypeScore=87.6927;InbreedingCoeff=0.7309;MQ=75.00;MQ0=3;MQRankSum=-2.217;QD=8.65;ReadPosRankSum=0.259;VQSLOD=2.7777;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:8:13.93:0,14,83	0/0:3,0:3:9:0,9,103	0/0:32,0:16:16.67:0,17,187	0/1:22,0:11:2.88:3,0,66	0/0:21,0:21:45.27:0,45,456	0/0:11,0:11:23.95:0,24,262	0/0:3,0:3:8.92:0,9,82	0/0:23,0:23:30.53:0,31,502	0/0:11,0:11:31.70:0,32,253	0/0:17,0:17:44.81:0,45,493	0/0:15,0:15:40.74:0,41,371	0/0:7,0:7:15.12:0,15,190	0/0:10,0:10:25.52:0,26,192	0/0:12,0:12:30.40:0,30,264	1/1:8,1:11:3.56:234,4,0	0/0:8,0:8:22.27:0,22,261	0/0:18,0:17:33.57:0,34,182	1/1:10,0:10:19.17:190,19,0	0/0:17,0:17:43.80:0,44,394	0/0:13,0:14:40.60:0,41,361	0/0:5,0:5:11.91:0,12,150	0/0:2,0:2:6:0,6,66	0/0:6,0:6:12.17:0,12,131	0/0:9,0:9:20.80:0,21,236	1/1:3,13:19:19.99:275,20,0	0/0:14,0:14:36.67:0,37,315	0/0:15,0:14:29.59:0,30,199	0/0:21,0:21:45.37:0,45,338
chr10	4298390	.	C	CT	785.63	PASS	AB=0.944;AC=19;AF=0.352;AN=54;BaseQRankSum=-2.095;DP=351;FS=1.364;HRun=14;HaplotypeScore=63.0516;InbreedingCoeff=0.1738;MQ=63.47;MQ0=10;MQRankSum=-1.781;QD=3.45;ReadPosRankSum=-1.867;VQSLOD=-0.1614;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:9,0:7:3.20:9,0,3	0/1:4,0:4:2.46:2,0,29	1/1:31,0:7:2.04:7,2,0	0/1:27,0:9:5.93:6,0,18	0/0:22,0:22:13.31:0,13,203	0/0:8,0:10:21.79:0,22,125	0/0:4,0:4:7.15:0,7,42	1/1:11,10:21:12.61:221,13,0	0/1:9,1:10:2.71:3,0,110	0/0:15,0:16:19.74:0,20,135	0/1:9,0:11:5.05:5,0,69	0/0:8,0:8:10.77:0,11,50	0/0:4,0:5:13.86:0,14,82	0/0:9,0:9:20.19:0,20,133	0/0:11,0:10:14.95:0,15,76	0/0:7,0:7:14.03:0,14,84	0/0:18,0:16:8.89:0,9,27	0/1:9,0:7:13.97:14,0,33	0/1:16,1:17:3.38:3,0,88	0/1:11,1:12:6.86:7,0,85	0/1:3,1:4:17.45:17,0,29	./.	0/0:6,0:6:17.74:0,18,115	0/0:7,0:7:10.38:0,10,59	0/1:18,0:18:6.76:51,0,7	1/1:8,7:15:24:211,24,0	1/1:13,4:17:12.13:221,12,0	0/1:12,4:16:23.67:168,0,24
chr10	4298614	.	AAC	A	1343.07	PASS	AB=0.895;AC=16;AF=0.296;AN=54;BaseQRankSum=10.793;DP=531;FS=0.517;HRun=0;HaplotypeScore=84.2778;InbreedingCoeff=0.4676;MQ=55.10;MQ0=10;MQRankSum=-2.445;QD=7.26;ReadPosRankSum=1.607;VQSLOD=3.2164;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:28:6.46:0,6,50	0/0:4,0:7:7.63:0,8,42	./.	0/0:29,0:13:5.99:0,6,67	0/1:18,2:21:18.32:18,0,316	0/1:15,1:16:4.21:4,0,387	0/0:17,0:17:21.07:0,21,324	0/0:28,1:29:7.77:0,8,515	0/0:18,1:19:7.75:0,8,565	0/0:16,0:16:8.70:0,9,436	0/0:17,0:17:33.10:0,33,484	0/1:15,2:17:38.55:39,0,325	0/0:14,0:14:27.09:0,27,415	0/1:16,1:17:4.34:4,0,387	1/1:9,0:26:28.41:140,28,0	0/0:15,1:16:12.32:0,12,417	0/1:11,0:11:0:0,0,0	1/1:2,0:6:8.52:42,9,0	0/0:15,0:15:12.04:0,12,185	0/0:10,0:10:15.05:0,15,232	0/0:53,2:55:54.70:0,55,1639	0/0:16,0:16:24.08:0,24,371	0/0:7,0:7:12.04:0,12,185	0/0:29,1:30:10.83:0,11,614	1/1:2,0:13:28.36:139,28,0	0/1:10,8:19:16.37:258,0,16	1/1:6,19:24:51.14:583,51,0	1/1:3,9:13:26.91:288,27,0
chr10	4298995	.	GA	G	1383.20	PASS	AB=0.968;AC=13;AF=0.232;AN=56;BaseQRankSum=8.203;DP=543;FS=2.714;HRun=12;HaplotypeScore=63.2584;InbreedingCoeff=0.6988;MQ=67.84;MQ0=24;MQRankSum=1.614;QD=7.60;ReadPosRankSum=2.314;VQSLOD=2.4022;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,29:30:56.77:441,57,0	0/0:4,0:4:9.02:0,9,91	0/0:63,0:16:27.33:0,27,238	0/1:54,1:12:11.32:11,0,34	0/0:26,0:27:51.62:0,52,666	0/0:11,0:11:33.02:0,33,315	0/0:13,1:16:12.67:0,13,296	0/0:3,0:23:58.75:0,59,337	0/0:10,0:11:23.88:0,24,224	0/0:14,0:14:32.89:0,33,313	0/0:20,0:20:30.47:0,30,453	0/0:19,1:19:33.86:0,34,514	0/0:10,0:10:30.06:0,30,304	0/0:11,0:11:29.94:0,30,283	0/0:14,0:14:33.01:0,33,317	0/1:8,0:8:1.94:2,0,162	1/1:5,23:29:52.83:399,53,0	0/0:21,1:24:33.04:0,33,469	0/0:17,0:14:12.83:0,13,306	0/0:12,0:13:29.89:0,30,288	0/1:12,1:14:32.49:32,0,185	0/0:12,1:13:6.43:0,6,245	0/0:20,1:21:27.85:0,28,456	0/0:6,0:7:14.20:0,14,175	0/0:19,1:20:33.74:0,34,504	1/1:3,15:18:46.85:351,47,0	1/1:3,9:12:23.84:181,24,0	1/1:4,6:10:19.96:145,20,0
chr10	4299338	.	A	AT	2226.63	PASS	AB=0.667;AC=9;AF=0.161;AN=56;BaseQRankSum=-9.125;DP=567;FS=7.927;HRun=12;HaplotypeScore=59.8323;InbreedingCoeff=0.7914;MQ=67.37;MQ0=0;MQRankSum=1.356;QD=19.53;ReadPosRankSum=0.375;VQSLOD=4.5471;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,28:32:74.63:685,75,0	0/0:6,0:7:19.93:0,20,137	0/0:14,0:14:9.02:0,9,112	0/0:13,0:10:4.93:0,5,72	0/0:30,0:31:73.80:0,74,542	0/0:15,1:17:11.60:0,12,239	0/0:19,0:19:44.67:0,45,324	0/0:38,0:39:63.82:0,64,499	0/0:17,0:17:29.56:0,30,218	0/0:30,1:31:51.35:0,51,540	0/0:24,0:25:61.63:0,62,442	0/0:21,0:21:56.62:0,57,414	0/0:11,1:13:5.68:0,6,195	0/0:17,0:18:37.81:0,38,268	0/0:19,1:20:18.54:0,19,299	0/0:15,1:16:9.58:0,10,233	1/1:2,20:23:50.92:481,51,0	0/0:21,0:21:50.69:0,51,372	0/0:23,0:24:55.72:0,56,400	0/0:15,0:15:35.75:0,36,263	0/0:22,0:22:47.68:0,48,350	0/0:17,0:17:37.76:0,38,265	0/0:15,2:18:14.62:0,15,261	0/0:14,0:15:40.16:0,40,275	0/0:20,0:20:47.66:0,48,350	1/1:4,28:33:36.33:697,36,0	1/1:2,17:20:47.91:452,48,0	0/1:3,3:6:9.89:76,0,10
chr10	4300039	.	AAAACAAACAAAC	A	2156.01	PASS	AB=1.000;AC=8;AF=0.143;AN=56;BaseQRankSum=7.817;DP=526;FS=12.234;HRun=0;HaplotypeScore=171.5718;InbreedingCoeff=0.5876;MQ=50.96;MQ0=10;MQRankSum=-7.012;QD=21.35;ReadPosRankSum=-0.425;VQSLOD=2.2250;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:12,23:35:23.91:488,24,0	0/0:1,0:1:3.01:0,3,177	0/0:28,0:8:12.51:0,13,674	0/0:41,0:14:18.04:0,18,744	0/0:23,0:22:53.96:0,54,2549	0/0:26,0:26:60.18:0,60,3264	0/0:16,0:16:42.14:0,42,2441	0/0:22,0:22:42.11:0,42,1516	0/0:22,0:22:57.12:0,57,2591	0/0:13,0:13:27.09:0,27,1503	0/0:17,0:16:39.08:0,39,1559	0/0:11,0:11:33.11:0,33,1845	0/0:19,0:18:42.14:0,42,2440	0/0:15,0:15:30.10:0,30,1621	0/0:18,0:18:24.08:0,24,768	0/0:20,0:21:51.17:0,51,2754	0/1:24,0:24:25.33:641,0,25	0/0:24,0:24:39.06:0,39,1114	0/0:12,0:11:30.10:0,30,1516	0/0:17,0:17:48.16:0,48,2650	0/0:22,0:22:45.10:0,45,2085	0/0:4,0:4:3.01:0,3,177	0/0:15,0:15:42.12:0,42,2209	0/0:15,0:16:36.11:0,36,1795	0/0:21,0:21:51.14:0,51,1307	0/1:24,0:24:99:666,0,141	1/1:14,0:14:14.95:361,15,0	1/1:4,0:4:6.02:145,6,0
chr10	4300056	.	AAACAAACAAAC	A	2735.78	PASS	AB=0.859;AC=9;AF=0.161;AN=56;BaseQRankSum=8.443;DP=493;FS=2.861;HRun=0;HaplotypeScore=146.6496;InbreedingCoeff=0.2741;MQ=50.74;MQ0=14;MQRankSum=-5.522;QD=22.06;ReadPosRankSum=-0.734;VQSLOD=2.9488;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:33:99:343,0,303	0/0:2,0:2:6.02:0,6,232	0/0:33,0:10:29.97:0,30,972	0/0:36,0:8:18.04:0,18,701	0/0:21,0:21:62.97:0,63,2533	0/0:22,0:22:66.18:0,66,3169	0/0:16,0:16:48.16:0,48,2507	0/0:24,0:24:65.13:0,65,1638	0/0:22,0:21:60.13:0,60,2499	0/0:13,0:13:36.11:0,36,1577	0/0:20,0:19:54.10:0,54,1715	0/0:11,0:11:33.11:0,33,1744	0/0:17,0:16:42.14:0,42,2319	0/0:11,0:11:33.10:0,33,1553	0/1:10,0:10:4.20:4,0,673	0/0:20,0:20:57.19:0,57,2687	0/1:13,6:19:46.98:565,0,47	0/1:21,0:21:24.40:24,0,899	0/0:15,0:13:39.13:0,39,1640	0/0:17,0:17:51.18:0,51,2617	0/0:19,0:19:50.86:0,51,2101	0/0:1,0:1:3.01:0,3,168	0/0:14,0:14:42.12:0,42,2142	0/0:14,0:14:42.13:0,42,1976	0/0:21,0:21:60.11:0,60,1236	0/1:3,20:23:99:1193,0,107	1/1:1,8:9:14.93:535,15,0	1/1:1,8:8:6.02:214,6,0
chr10	4300058	.	ACAAACAAAC	A	1879.81	PASS	AB=0.938;AC=8;AF=0.143;AN=56;BaseQRankSum=9.333;DP=488;FS=5.889;HRun=0;HaplotypeScore=130.3992;InbreedingCoeff=0.3187;MQ=50.74;MQ0=15;MQRankSum=-5.662;QD=17.25;ReadPosRankSum=-1.046;VQSLOD=2.2295;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:33:99:295,0,356	0/0:2,0:2:6.02:0,6,185	0/0:35,0:11:16.80:0,17,779	0/0:36,0:7:18.04:0,18,627	0/0:21,0:21:62.99:0,63,2165	0/0:22,0:22:66.20:0,66,2754	0/0:17,0:17:51.17:0,51,2201	0/0:26,0:26:39.32:0,39,1218	0/0:22,0:21:60.12:0,60,2138	0/0:12,0:12:36.12:0,36,1330	0/0:20,0:19:57.13:0,57,1530	0/0:11,0:11:33.11:0,33,1496	0/0:16,0:15:45.15:0,45,2024	0/0:11,0:11:33.11:0,33,1333	0/0:11,0:11:11.55:0,12,516	0/0:19,0:19:57.19:0,57,2285	0/1:12,6:18:99:450,0,106	0/1:20,0:20:33.62:34,0,642	0/0:14,0:13:39.13:0,39,1408	0/0:17,0:17:51.18:0,51,2233	0/0:17,0:17:51.11:0,51,1826	0/0:1,0:1:3.01:0,3,145	0/0:14,0:14:42.12:0,42,1850	0/0:14,0:14:42.13:0,42,1684	0/0:21,0:21:59.95:0,60,976	0/1:21,0:21:94.50:715,0,94	1/1:8,0:8:14.97:375,15,0	1/1:9,0:8:6.02:150,6,0
chr10	4300066	.	AC	A	1191.01	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=10.894;DP=483;FS=0.474;HRun=1;HaplotypeScore=70.4388;InbreedingCoeff=0.8116;MQ=56.76;MQ0=14;MQRankSum=-5.364;QD=10.45;ReadPosRankSum=-1.339;VQSLOD=0.8317;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:36.25:0,36,453	0/0:3,0:3:8.97:0,9,94	0/0:33,3:15:18.38:0,18,319	0/0:37,0:8:15.02:0,15,171	0/0:19,0:19:53.81:0,54,649	0/0:23,0:23:69.14:0,69,840	0/0:17,0:17:51.15:0,51,663	1/1:27,0:27:9.32:203,9,0	0/0:16,0:15:45.13:0,45,582	0/0:14,0:14:42.02:0,42,507	0/0:17,0:16:45.10:0,45,536	0/0:13,0:13:39.08:0,39,486	0/0:15,0:15:45.13:0,45,586	0/0:10,0:10:30.08:0,30,384	1/1:7,7:14:19.16:289,19,0	0/0:18,0:18:44.60:0,45,654	0/0:18,0:18:3.07:0,3,94	1/1:11,9:20:50.44:395,50,0	0/0:14,0:13:24.24:0,24,371	0/0:20,0:20:54.06:0,54,664	0/0:14,0:14:42.11:0,42,526	0/0:1,0:1:3.01:0,3,41	0/0:14,0:14:41.95:0,42,507	0/0:14,0:14:32.54:0,33,463	1/1:7,8:15:41.59:348,42,0	0/1:21,0:21:3.95:74,0,4	1/1:8,0:8:12.41:42,12,0	1/1:9,0:8:4.99:17,5,0
chr10	4300067	.	C	CA	569.34	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=8.004;DP=488;FS=2.737;HRun=8;HaplotypeScore=74.0522;InbreedingCoeff=0.6850;MQ=56.78;MQ0=13;MQRankSum=-2.500;QD=4.87;ReadPosRankSum=-2.824;VQSLOD=-0.1080;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:52.76:0,53,430	0/0:3,0:3:9:0,9,79	0/0:36,1:16:31.73:0,32,269	0/0:36,0:8:11.55:0,12,85	0/0:18,0:18:45.02:0,45,411	0/0:23,0:23:59.69:0,60,527	0/0:17,0:17:47.96:0,48,420	0/1:29,0:29:46.85:47,0,144	0/0:16,0:15:41.94:0,42,365	0/0:15,0:15:42.01:0,42,380	0/0:17,0:16:39.01:0,39,356	0/0:13,0:13:39:0,39,350	0/0:15,0:15:42:0,42,379	0/0:10,0:10:27.01:0,27,247	1/1:9,6:15:10:138,10,0	0/0:18,0:18:50.87:0,51,448	0/0:19,0:19:25.18:0,25,105	1/1:13,6:19:5.82:147,6,0	0/0:14,0:13:26.87:0,27,231	0/0:20,0:20:48:0,48,434	0/0:14,0:14:38.75:0,39,338	0/0:1,0:1:3:0,3,27	0/0:15,0:15:36.01:0,36,327	0/0:14,0:14:35.79:0,36,295	1/1:12,3:15:8.82:118,9,0	1/1:21,0:21:4.68:258,5,0	1/1:9,0:9:1.87:5,2,0	1/1:9,0:8:0.94:2,1,0
chr10	4300073	.	AAAC	A	1345.95	PASS	AB=0.700;AC=7;AF=0.125;AN=56;BaseQRankSum=7.541;DP=473;FS=12.999;HRun=0;HaplotypeScore=85.0869;InbreedingCoeff=0.7634;MQ=60.85;MQ0=12;MQRankSum=-3.797;QD=22.43;ReadPosRankSum=1.360;VQSLOD=2.4728;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:49.68:0,50,883	0/0:3,0:3:9.03:0,9,175	0/0:37,0:18:41.72:0,42,810	0/0:35,0:11:20.15:0,20,279	0/0:16,0:16:48.16:0,48,1079	0/0:22,0:22:66.19:0,66,1410	0/0:16,0:16:48.16:0,48,1064	0/0:33,0:33:98.02:0,98,1572	0/0:15,0:14:42.14:0,42,915	0/0:17,0:17:51.13:0,51,1082	0/0:15,0:15:45.15:0,45,958	0/0:13,0:13:39.13:0,39,893	0/0:14,0:14:42.14:0,42,973	0/0:9,0:9:27.09:0,27,639	1/1:15,0:15:22.21:451,22,0	0/0:17,0:17:51.13:0,51,1133	0/1:8,6:14:66.67:120,0,67	1/1:18,0:18:29.09:480,29,0	0/0:15,0:14:41.99:0,42,735	0/0:19,0:19:57.19:0,57,1229	0/0:14,0:14:42.12:0,42,903	0/0:1,0:1:3.01:0,3,72	0/0:15,0:15:45.12:0,45,936	0/0:12,0:12:36.06:0,36,728	1/1:13,0:13:33.02:442,33,0	0/0:20,0:20:38.35:0,38,217	0/0:11,0:11:21.78:0,22,149	0/0:11,0:10:11.21:0,11,96
chr10	4300074	.	AAC	A	758.76	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=8.294;DP=464;FS=14.353;HRun=0;HaplotypeScore=75.9624;InbreedingCoeff=0.7651;MQ=61.02;MQ0=11;MQRankSum=-3.922;QD=12.86;ReadPosRankSum=1.095;VQSLOD=2.3457;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:52.58:0,53,836	0/0:3,0:3:9.02:0,9,139	0/0:36,0:18:39.16:0,39,665	0/0:34,0:10:16.86:0,17,181	0/0:16,0:16:48.16:0,48,887	0/0:22,0:22:63.17:0,63,1112	0/0:16,0:16:48.13:0,48,818	0/0:33,0:33:96.97:0,97,1292	0/0:15,0:14:42.06:0,42,697	0/0:18,0:18:54.12:0,54,928	0/0:15,0:15:45.14:0,45,803	0/0:13,0:13:39.12:0,39,718	0/0:14,0:14:42.13:0,42,773	0/0:9,0:9:27.09:0,27,519	1/1:8,7:15:18.74:252,19,0	0/0:17,0:17:51.15:0,51,914	0/1:13,0:13:79.53:96,0,80	1/1:11,7:18:43.74:314,44,0	0/0:14,0:13:38.99:0,39,572	0/0:19,0:19:57.18:0,57,1027	0/0:14,0:14:39.12:0,39,715	0/0:1,0:1:3.01:0,3,58	0/0:14,0:14:42.13:0,42,743	0/0:12,0:12:36.05:0,36,557	1/1:6,7:13:30.85:245,31,0	0/0:17,0:17:43.12:0,43,343	0/0:11,0:11:21.78:0,22,146	0/0:12,0:11:14.17:0,14,90
chr10	4300439	.	AGG	A	934.08	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=7.731;DP=434;FS=9.671;HRun=4;HaplotypeScore=55.6360;InbreedingCoeff=0.9104;MQ=64.97;MQ0=11;MQRankSum=-7.131;QD=21.72;ReadPosRankSum=-0.851;VQSLOD=0.3158;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,11:14:26.24:394,26,0	0/0:1,0:1:3.01:0,3,56	0/0:8,0:8:21.07:0,21,393	0/0:12,0:11:15.31:0,15,435	0/0:24,0:22:57.20:0,57,1065	0/0:18,0:17:51.13:0,51,919	0/0:24,0:24:72.20:0,72,1265	0/0:25,0:24:63.21:0,63,1125	0/0:13,0:13:39.13:0,39,726	0/0:16,0:16:45.15:0,45,843	0/0:18,0:18:51.17:0,51,955	0/0:8,0:8:24.07:0,24,403	0/0:21,0:21:57.15:0,57,1012	0/0:13,0:13:36.12:0,36,654	1/1:1,7:8:18.06:264,18,0	0/0:9,0:9:27.09:0,27,506	1/1:1,5:6:9.03:130,9,0	1/1:0,5:5:15.05:220,15,0	0/0:13,0:13:33.09:0,33,525	0/0:20,0:19:54.16:0,54,948	0/0:23,0:23:57.20:0,57,1068	0/0:15,0:15:39.13:0,39,729	0/0:13,0:13:30.07:0,30,529	0/0:33,0:31:84.29:0,84,1557	1/1:0,6:6:6.02:88,6,0	0/0:22,0:21:66.22:0,66,1212	0/0:29,0:28:72.25:0,72,1322	0/0:13,0:13:39.09:0,39,694
chr10	4304476	.	CAG	C	4584.32	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=15.868;DP=731;FS=3.332;HRun=0;HaplotypeScore=102.7418;InbreedingCoeff=0.9999;MQ=83.99;MQ0=0;MQRankSum=-2.794;QD=36.38;ReadPosRankSum=1.962;VQSLOD=7.2007;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,34:37:90.30:1284,90,0	0/0:13,0:13:39.13:0,39,715	0/0:19,0:19:51.17:0,51,876	0/0:30,0:30:72.38:0,72,1251	0/0:32,0:32:93.32:0,93,1705	0/0:31,0:31:90.29:0,90,1615	0/0:23,0:23:63.22:0,63,1149	0/0:35,0:35:99:0,105,1894	0/0:17,0:17:48.16:0,48,880	0/0:37,0:37:99:0,111,2033	0/0:22,0:22:63.20:0,63,1113	0/0:22,0:22:66.21:0,66,1174	0/0:37,0:37:99:0,108,1968	0/0:28,0:28:78.27:0,78,1429	1/1:2,28:30:78.26:1118,78,0	0/0:33,0:33:96.33:0,96,1758	1/1:1,25:26:72.24:1032,72,0	1/1:0,16:16:42.10:579,42,0	0/0:30,0:30:84.29:0,84,1531	0/0:18,0:18:54.16:0,54,921	0/0:31,0:31:84.27:0,84,1497	0/0:29,0:29:87.30:0,87,1594	0/0:25,0:25:69.24:0,69,1259	0/0:22,0:22:60.21:0,60,1092	1/1:0,17:17:42.10:572,42,0	0/0:34,0:34:96.32:0,96,1730	0/0:26,0:26:78.25:0,78,1393	0/0:11,0:11:33.11:0,33,605
chr10	4307239	.	C	CT	4970.18	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-12.146;DP=701;FS=0.366;HRun=3;HaplotypeScore=68.0809;InbreedingCoeff=0.9997;MQ=80.94;MQ0=0;MQRankSum=-2.962;QD=36.82;ReadPosRankSum=2.458;VQSLOD=5.4433;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,38:38:99:1470,105,0	0/0:13,0:13:39.12:0,39,468	0/0:25,0:25:59.71:0,60,644	0/0:12,0:12:27.06:0,27,305	0/0:29,0:29:84.22:0,84,983	0/0:38,0:38:99:0,102,1224	0/0:32,0:32:90.26:0,90,1066	0/0:42,0:42:99:0,111,1306	0/0:19,0:19:54.17:0,54,647	0/0:23,0:23:63.07:0,63,703	0/0:20,0:20:60.18:0,60,720	0/0:22,0:22:60.18:0,60,720	0/0:24,0:24:66.20:0,66,792	0/0:23,0:23:66.18:0,66,769	1/1:3,17:20:48.16:672,48,0	0/0:33,0:33:96.29:0,96,1152	1/1:1,37:38:99:1359,99,0	1/1:4,15:19:48.16:670,48,0	0/0:18,0:18:48.15:0,48,576	0/0:35,0:35:99:0,105,1235	0/0:34,0:34:99:0,102,1182	0/0:16,0:16:45.10:0,45,525	0/0:19,0:19:47.11:0,47,589	0/0:25,0:25:72.20:0,72,851	1/1:0,20:20:57.19:798,57,0	0/0:22,0:22:60.18:0,60,720	0/0:28,0:28:81.23:0,81,950	0/0:14,0:14:33.10:0,33,396
chr10	4307809	.	TC	T	2764.24	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=10.439;DP=597;FS=10.786;HRun=1;HaplotypeScore=58.5409;InbreedingCoeff=0.9988;MQ=61.37;MQ0=1;MQRankSum=-0.371;QD=28.79;ReadPosRankSum=4.340;VQSLOD=2.2044;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,23:22:42.10:560,42,0	0/0:8,0:8:24.05:0,24,295	0/0:14,0:13:31.59:0,32,351	0/0:19,0:15:26.75:0,27,420	0/0:22,0:22:60.69:0,61,798	0/0:29,0:28:87.22:0,87,1097	0/0:18,0:18:54.16:0,54,717	0/0:38,0:38:99:0,109,1324	0/0:21,0:21:59.53:0,60,729	0/0:28,0:28:81.24:0,81,1043	0/0:31,0:31:84.05:0,84,1046	0/0:18,0:18:51.12:0,51,644	0/0:20,0:20:50.30:0,50,708	0/0:21,0:21:60.18:0,60,789	1/1:1,16:17:48.07:642,48,0	0/0:19,0:19:57.15:0,57,728	1/1:0,25:25:60.15:809,60,0	1/1:2,14:16:25.67:407,26,0	0/0:14,0:14:39.11:0,39,504	0/0:42,0:42:99:0,123,1587	0/0:15,0:15:45.11:0,45,564	0/0:16,0:16:48.09:0,48,572	0/0:26,0:26:78.16:0,78,956	0/0:14,0:14:42.14:0,42,571	1/1:0,15:15:39.11:521,39,0	0/0:23,0:23:69.18:0,69,880	0/0:25,0:25:75.14:0,75,903	0/0:20,0:19:60.18:0,60,798
chr10	4307810	.	CT	C	859.38	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=12.884;DP=601;FS=6.583;HRun=10;HaplotypeScore=67.1851;InbreedingCoeff=0.8047;MQ=61.20;MQ0=2;MQRankSum=0.848;QD=8.95;ReadPosRankSum=3.034;VQSLOD=2.1999;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:22:37.47:197,37,0	0/0:7,0:7:18.05:0,18,199	0/0:13,1:13:3.98:0,4,250	0/0:19,0:14:9.44:0,9,252	0/0:21,1:23:34.50:0,34,586	0/0:28,0:27:75.16:0,75,809	0/0:20,0:20:57.13:0,57,614	0/0:38,1:39:70.18:0,70,985	0/0:20,1:21:22.03:0,22,444	0/0:28,0:28:66.17:0,66,722	0/0:29,0:29:72.18:0,72,782	0/0:18,0:18:42.10:0,42,457	0/0:18,2:20:8.06:0,8,545	0/0:21,0:21:60.14:0,60,652	1/1:17,0:17:42.74:209,43,0	0/0:20,0:20:54.08:0,54,568	1/1:25,0:25:54.82:287,55,0	0/1:16,0:16:31.16:127,0,31	0/0:13,0:13:33.08:0,33,358	0/0:43,0:44:99:0,108,1216	0/0:15,0:15:36.10:0,36,398	0/0:17,0:17:33.09:0,33,365	0/0:27,0:27:69.15:0,69,747	0/0:15,0:15:42.11:0,42,464	1/1:15,0:15:37.31:203,37,0	0/0:23,0:23:60.16:0,60,663	0/0:25,0:25:57.14:0,57,621	0/0:19,0:18:57.15:0,57,631
chr10	4308288	.	CAAG	C	2057.17	PASS	AB=0.606;AC=3;AF=0.054;AN=56;BaseQRankSum=5.362;DP=597;FS=14.521;HRun=0;HaplotypeScore=95.3081;InbreedingCoeff=-0.0569;MQ=71.34;MQ0=7;MQRankSum=-4.003;QD=26.72;ReadPosRankSum=2.925;VQSLOD=3.0017;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:93.32:0,93,2236	0/0:8,0:7:21.07:0,21,504	0/0:16,0:16:45.13:0,45,925	0/0:18,0:17:51.11:0,51,1036	0/0:25,0:25:72.23:0,72,1725	0/0:19,0:19:57.20:0,57,1369	0/0:23,0:22:60.16:0,60,1393	0/0:29,0:29:87.28:0,87,2019	0/0:13,0:13:36.11:0,36,838	0/0:21,0:20:60.20:0,60,1400	0/0:18,0:18:54.18:0,54,1254	0/0:17,0:16:48.15:0,48,1057	0/0:20,0:20:57.20:0,57,1405	0/0:20,0:19:57.20:0,57,1352	0/1:11,21:32:99:778,0,643	0/0:20,0:20:57.20:0,57,1383	0/0:27,0:25:69.24:0,69,1672	0/1:9,15:23:99:713,0,274	0/0:19,0:18:54.19:0,54,1282	0/0:24,0:24:72.25:0,72,1761	0/0:23,0:23:66.23:0,66,1626	0/0:21,0:21:60.21:0,60,1478	0/0:20,0:20:60.19:0,60,1429	0/0:20,0:20:54.18:0,54,1294	0/1:7,14:21:99:667,0,421	0/0:26,0:26:75.26:0,75,1812	0/0:32,0:31:93.32:0,93,2216	0/0:9,0:7:21.07:0,21,517
chr10	4308364	.	CG	C	1261.27	PASS	AB=0.874;AC=10;AF=0.192;AN=52;BaseQRankSum=4.155;DP=382;FS=0.594;HRun=2;HaplotypeScore=47.5447;InbreedingCoeff=0.5069;MQ=37.54;MQ0=45;MQRankSum=-3.205;QD=10.51;ReadPosRankSum=1.088;VQSLOD=1.5703;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:10:23.91:0,24,135	0/0:10,0:8:21.05:0,21,289	./.	./.	0/0:19,0:17:38.88:0,39,422	0/0:14,0:13:39.10:0,39,540	0/0:19,0:17:47.89:0,48,591	0/0:15,0:12:30.07:0,30,422	0/0:6,0:6:14.97:0,15,177	0/0:20,0:18:48.09:0,48,615	0/0:10,0:10:23.02:0,23,282	0/0:13,0:10:30.03:0,30,419	0/0:13,0:12:33.03:0,33,440	0/0:13,0:12:32.64:0,33,383	0/1:17,2:19:79.39:79,0,95	0/0:11,0:10:27.09:0,27,401	0/1:20,0:16:8.72:9,0,126	0/1:16,2:12:49.87:50,0,64	0/0:19,0:17:39.05:0,39,498	0/0:12,0:11:30.06:0,30,371	0/0:14,0:9:27.01:0,27,335	0/0:8,0:8:24.05:0,24,318	0/0:17,0:14:36.08:0,36,475	0/0:15,0:13:24.08:0,24,356	0/1:11,9:20:99:276,0,99	1/1:1,8:8:21.07:270,21,0	1/1:6,12:14:39.10:484,39,0	1/1:8,8:10:21.03:251,21,0
chr10	4309185	.	AAC	A	435.39	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.705;DP=685;FS=1.121;HRun=0;HaplotypeScore=76.3592;InbreedingCoeff=0.9960;MQ=81.29;MQ0=0;MQRankSum=-1.817;QD=33.49;ReadPosRankSum=1.740;VQSLOD=5.6617;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,117,2088	0/0:10,0:10:30.09:0,30,530	0/0:22,0:22:54.18:0,54,975	0/0:14,0:14:33.04:0,33,544	0/0:24,0:24:69.24:0,69,1292	0/0:25,0:25:75.26:0,75,1404	0/0:9,0:9:27.09:0,27,506	0/0:46,0:46:99:0,132,2376	0/0:25,0:25:75.26:0,75,1404	0/0:38,0:38:99:0,111,2070	0/0:30,0:30:90.31:0,90,1663	0/0:30,0:30:90.29:0,90,1631	0/0:25,0:25:69.24:0,69,1292	0/0:25,0:25:75.26:0,75,1402	0/0:20,0:20:60.21:0,60,1122	0/0:34,0:34:99:0,99,1799	1/1:1,12:13:36.12:530,36,0	0/0:22,0:22:63.22:0,63,1176	0/0:19,0:19:54.16:0,54,940	0/0:30,0:30:90.29:0,90,1643	0/0:9,0:9:24.08:0,24,449	0/0:23,0:23:69.24:0,69,1292	0/0:28,0:28:81.26:0,81,1485	0/0:20,0:20:60.21:0,60,1123	0/0:26,0:26:72.24:0,72,1318	0/0:32,0:32:96.32:0,96,1770	0/0:34,0:34:96.33:0,96,1795	0/0:13,0:13:39.13:0,39,730
chr10	4312059	.	GC	G	2470.86	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=10.674;DP=718;FS=14.741;HRun=1;HaplotypeScore=67.9640;InbreedingCoeff=0.9998;MQ=78.68;MQ0=0;MQRankSum=-3.846;QD=36.34;ReadPosRankSum=1.908;VQSLOD=2.4504;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,44:44:99:1671,120,0	0/0:11,0:11:33.10:0,33,503	0/0:21,0:21:57.07:0,57,819	0/0:15,0:15:45.05:0,45,623	0/0:29,0:29:87.15:0,87,1308	0/0:28,0:28:84.23:0,84,1248	0/0:28,0:28:84.28:0,84,1316	0/0:45,0:45:99:0,132,1928	0/0:24,0:24:72.20:0,72,1098	0/0:17,0:17:51.17:0,51,793	0/0:31,0:31:93.27:0,93,1409	0/0:24,0:24:72.23:0,72,1124	0/0:23,0:23:69.19:0,69,1072	0/0:28,0:28:84.26:0,84,1289	0/0:25,0:25:75.23:0,75,1149	0/0:34,0:34:99:0,102,1583	1/1:0,24:24:66.22:921,66,0	0/0:20,0:20:60.15:0,60,886	0/0:24,0:24:72.21:0,72,1061	0/0:28,0:28:83.50:0,83,1300	0/0:20,0:20:60.18:0,60,912	0/0:26,0:26:78.16:0,78,1211	0/0:16,0:16:48.15:0,48,738	0/0:26,0:26:78.22:0,78,1172	0/0:21,0:21:63.17:0,63,937	0/0:28,0:28:84.28:0,84,1310	0/0:42,0:42:99:0,126,1963	0/0:16,0:16:48.16:0,48,766
chr10	4312334	.	G	GC	1308.89	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-7.429;DP=650;FS=4.023;HRun=6;HaplotypeScore=59.5900;InbreedingCoeff=0.9994;MQ=85.99;MQ0=0;MQRankSum=-3.271;QD=22.96;ReadPosRankSum=1.531;VQSLOD=3.2173;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,22:28:54.17:676,54,0	0/0:10,0:10:30.06:0,30,301	0/0:20,0:20:57.08:0,57,561	0/0:23,0:23:65.43:0,65,611	0/0:36,0:36:99:0,99,1010	0/0:21,0:21:57.09:0,57,564	0/0:17,0:17:45.09:0,45,453	0/0:32,0:32:75.16:0,75,765	0/0:20,0:20:51.09:0,51,513	0/0:27,0:27:75.16:0,75,762	0/0:30,0:30:87.18:0,87,882	0/0:23,0:23:66.15:0,66,673	0/0:31,0:31:87.19:0,87,883	0/0:18,0:18:51.12:0,51,520	0/0:22,0:22:60.11:0,60,604	0/0:21,0:21:60.14:0,60,612	1/1:5,24:29:60.19:755,60,0	0/0:13,0:13:33.03:0,33,326	0/0:19,0:19:48.11:0,48,489	0/0:29,0:29:87.17:0,87,874	0/0:19,0:19:51.12:0,51,520	0/0:25,0:25:72.12:0,72,714	0/0:26,0:26:72.14:0,72,723	0/0:17,0:17:45.10:0,45,459	0/0:27,0:27:75.17:0,75,765	0/0:24,0:24:72.15:0,72,725	0/0:32,0:32:93.18:0,93,935	0/0:11,0:11:33.08:0,33,337
chr10	4313883	.	T	TTCTCTC	2072.74	PASS	AB=1.000;AC=13;AF=0.241;AN=54;BaseQRankSum=-1.136;DP=491;FS=0.000;HRun=0;HaplotypeScore=110.2288;InbreedingCoeff=0.7848;MQ=68.05;MQ0=2;MQRankSum=-7.314;QD=25.91;ReadPosRankSum=-1.383;VQSLOD=3.0410;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,0:5:0.47:1,0,0	0/0:5,0:5:9.03:0,9,189	0/0:33,0:15:8.26:0,8,80	0/0:31,0:18:7.40:0,7,101	0/0:23,0:22:53.39:0,53,1038	0/0:29,0:31:40.72:0,41,1156	0/0:17,0:17:27.09:0,27,564	0/0:29,0:29:30:0,30,461	0/0:15,0:15:39.11:0,39,733	0/0:28,0:28:47.95:0,48,934	0/0:11,0:11:24.06:0,24,427	0/0:17,0:17:36.12:0,36,716	0/0:11,0:11:21.06:0,21,403	0/0:19,0:19:42.14:0,42,874	1/1:7,8:16:24.08:743,24,0	0/0:26,0:26:54.14:0,54,1080	1/1:5,0:5:8.23:36,8,0	1/1:2,9:14:24.08:730,24,0	0/0:23,0:23:39.13:0,39,801	0/0:19,0:19:48.11:0,48,905	0/0:19,0:21:39.10:0,39,732	0/0:7,0:7:15.05:0,15,309	0/0:16,0:18:39.08:0,39,651	0/0:21,0:21:33.09:0,33,637	1/1:7,6:17:18.06:391,18,0	0/1:15,0:15:99:120,0,111	1/1:7,0:7:9.03:220,9,0	./.
chr10	4314070	.	C	CT	1131.93	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=1.342;DP=430;FS=2.011;HRun=12;HaplotypeScore=50.6246;InbreedingCoeff=0.7627;MQ=53.99;MQ0=6;MQRankSum=-1.669;QD=11.67;ReadPosRankSum=1.716;VQSLOD=3.2318;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,21:28:17.11:319,17,0	0/0:8,0:8:17.87:0,18,131	0/0:10,0:3:2.41:0,2,13	0/0:7,0:3:4.62:0,5,21	0/0:19,0:18:41.07:0,41,296	0/0:17,0:17:26.80:0,27,197	0/0:16,0:17:37.77:0,38,266	0/0:40,0:39:59.26:0,59,430	0/0:10,0:10:17.84:0,18,131	0/0:21,0:21:38.66:0,39,284	0/0:8,0:8:8.85:0,9,63	0/0:18,0:18:38.74:0,39,284	0/0:10,0:10:20.83:0,21,150	0/0:7,0:7:14.91:0,15,109	0/0:13,0:14:22.86:0,23,159	0/0:12,0:12:17.85:0,18,131	1/1:5,21:26:42.07:408,42,0	0/0:25,0:26:49.14:0,49,355	0/0:25,0:21:35.75:0,36,260	0/0:10,3:13:0.60:0,1,167	0/0:12,0:11:23.83:0,24,173	0/0:1,0:1:2.98:0,3,22	0/0:8,0:8:14.91:0,15,109	0/0:7,0:7:14.86:0,15,104	0/0:19,0:19:32.71:0,33,240	1/1:9,13:23:32.89:306,33,0	1/1:5,9:13:5.08:199,5,0	1/1:1,4:5:6.01:58,6,0
chr10	4315820	.	T	TC	4083.07	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=12.707;DP=517;FS=5.790;HRun=4;HaplotypeScore=72.9029;InbreedingCoeff=0.9991;MQ=81.88;MQ0=0;MQRankSum=-1.274;QD=36.78;ReadPosRankSum=0.353;VQSLOD=3.8755;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,26:27:69.41:944,69,0	0/0:10,0:10:30.06:0,30,328	0/0:15,0:15:33.04:0,33,356	0/0:14,0:14:30.06:0,30,326	0/0:22,0:22:54.14:0,54,603	0/0:21,0:21:63.18:0,63,715	0/0:16,0:16:45.13:0,45,510	0/0:39,0:39:99:0,117,1320	0/0:15,0:15:39.11:0,39,442	0/0:15,0:15:45.13:0,45,511	0/0:17,0:17:48.13:0,48,538	0/0:17,0:17:51.15:0,51,578	0/0:15,0:15:42.12:0,42,476	0/0:13,0:13:36.10:0,36,408	0/0:28,0:28:81.20:0,81,900	0/0:16,0:16:45.13:0,45,511	1/1:0,23:23:66.05:843,66,0	0/0:21,0:20:57.16:0,57,647	0/0:15,0:15:42.12:0,42,476	0/0:22,0:22:66.17:0,66,739	0/0:15,0:15:42.12:0,42,476	0/0:12,0:12:36.10:0,36,401	0/0:19,0:19:57.16:0,57,646	0/0:8,0:8:24.03:0,24,258	0/0:21,0:21:63.18:0,63,715	1/1:1,16:17:51.12:653,51,0	1/1:0,29:29:80.96:1062,81,0	1/1:0,15:15:45.12:581,45,0
chr10	4317674	.	G	GAA	6931.78	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=1.142;DP=697;FS=12.701;HRun=1;HaplotypeScore=90.3193;InbreedingCoeff=0.9713;MQ=89.27;MQ0=0;MQRankSum=-5.028;QD=51.73;ReadPosRankSum=2.674;VQSLOD=3.6367;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,31:35:99:1685,99,0	0/0:13,0:13:39.13:0,39,597	0/0:18,0:18:51.14:0,51,724	0/0:34,0:34:96.22:0,96,1383	0/0:30,0:30:87.30:0,87,1331	0/0:19,0:19:54.17:0,54,806	0/0:15,0:15:42.14:0,42,643	0/0:29,0:29:81.26:0,81,1204	0/0:33,0:33:96.31:0,96,1448	0/0:23,0:23:69.23:0,69,1056	0/0:20,0:20:60.20:0,60,919	0/0:25,0:25:72.19:0,72,1076	0/0:32,0:32:93.32:0,93,1422	0/0:28,0:28:81.28:0,81,1238	0/0:46,0:46:99:0,129,1973	0/0:24,0:24:72.24:0,72,1103	1/1:5,33:38:99:1988,105,0	0/0:25,0:25:72.24:0,72,1101	0/0:22,0:22:63.21:0,63,965	0/0:19,0:19:57.18:0,57,852	0/0:27,0:27:78.26:0,78,1195	0/0:21,0:21:60.20:0,60,919	0/0:13,0:13:39.13:0,39,592	0/0:28,0:28:81.26:0,81,1216	0/0:19,0:19:57.18:0,57,850	1/1:1,16:18:5.22:882,5,0	1/1:1,29:30:84.29:1623,84,0	1/1:0,13:13:39.13:754,39,0
chr10	4318214	.	ATCACAGCAAGT	A	4768.71	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=11.159;DP=743;FS=0.536;HRun=0;HaplotypeScore=227.7818;InbreedingCoeff=0.9993;MQ=82.54;MQ0=0;MQRankSum=-11.760;QD=63.58;ReadPosRankSum=0.215;VQSLOD=4.5697;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,41:41:93.32:2768,93,0	0/0:9,0:9:27.08:0,27,1335	0/0:24,0:24:69.24:0,69,3300	0/0:21,0:21:60.20:0,60,2729	0/0:30,0:30:87.28:0,87,4611	0/0:28,0:28:84.27:0,84,4477	0/0:26,0:26:78.25:0,78,4259	0/0:26,0:26:78.27:0,78,3904	0/0:28,0:28:81.28:0,81,4648	0/0:23,0:23:69.24:0,69,3744	0/0:27,0:27:75.26:0,75,4112	0/0:29,0:29:84.29:0,84,4717	0/0:23,0:23:69.22:0,69,3750	0/0:31,0:31:93.32:0,93,5083	0/0:32,0:32:93.32:0,93,4920	0/0:25,0:25:75.26:0,75,4151	1/1:5,29:34:57.20:2000,57,0	0/0:22,0:22:63.22:0,63,3605	0/0:23,0:23:69.23:0,69,3649	0/0:24,0:24:69.24:0,69,3708	0/0:57,0:57:99:0,169,9492	0/0:19,0:19:57.20:0,57,3118	0/0:21,0:21:60.21:0,60,2841	0/0:24,0:24:66.23:0,66,3767	0/0:21,0:21:63.22:0,63,3532	0/0:42,0:42:99:0,123,6863	0/0:22,0:22:66.23:0,66,3649	0/0:11,0:11:33.11:0,33,1883
chr10	4319755	.	GA	G	1768.61	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=9.543;DP=738;FS=4.971;HRun=2;HaplotypeScore=89.2839;InbreedingCoeff=0.5748;MQ=85.76;MQ0=0;MQRankSum=-1.689;QD=12.11;ReadPosRankSum=-1.572;VQSLOD=1.6793;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,34:43:78.74:865,79,0	0/0:13,0:13:39.12:0,39,558	0/0:28,0:28:71.07:0,71,893	0/0:23,0:23:65.91:0,66,898	0/0:33,0:33:99:0,99,1440	0/0:33,0:33:99:0,99,1418	0/0:36,0:36:99:0,105,1452	0/0:34,0:34:99:0,102,1391	0/0:19,0:19:57.18:0,57,832	0/0:22,0:22:66.21:0,66,935	0/0:20,0:20:57.19:0,57,848	0/0:33,0:33:96.32:0,96,1419	0/0:19,0:19:57.16:0,57,808	0/0:23,0:23:69.19:0,69,954	0/1:26,0:26:2.01:2,0,230	0/0:33,0:33:99:0,99,1463	1/1:0,35:41:85.56:975,86,0	0/0:17,0:17:23.11:0,23,170	0/0:27,0:27:75.22:0,75,1045	0/0:31,0:31:87.26:0,87,1231	0/0:28,0:28:84.27:0,84,1215	0/0:32,0:32:93.26:0,93,1278	0/0:23,0:23:69.11:0,69,977	0/0:31,0:31:93.28:0,93,1327	0/1:17,0:17:5.66:6,0,162	0/1:19,0:19:55.44:55,0,125	0/0:24,0:23:20.85:0,21,230	0/0:10,0:10:28.02:0,28,132
chr10	4320689	.	GCCCAAGGT	G	4570.69	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=11.373;DP=758;FS=7.991;HRun=0;HaplotypeScore=190.2501;InbreedingCoeff=0.9984;MQ=86.45;MQ0=0;MQRankSum=-12.130;QD=70.32;ReadPosRankSum=1.384;VQSLOD=4.4986;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,151,6653	0/0:16,0:16:45.15:0,45,1978	0/0:34,0:34:96.04:0,96,3617	0/0:23,0:23:63.22:0,63,2650	0/0:29,0:29:87.28:0,87,3780	0/0:19,0:19:57.20:0,57,2493	0/0:31,0:31:93.31:0,93,3840	0/0:33,0:33:90.30:0,90,3733	0/0:33,0:33:99:0,99,4376	0/0:26,0:26:78.27:0,78,3463	0/0:20,0:20:60.21:0,60,2575	0/0:27,0:27:81.28:0,81,3595	0/0:33,0:33:99:0,99,4313	0/0:31,0:31:93.31:0,93,3871	1/1:0,29:29:81.28:2323,81,0	0/0:23,0:23:69.22:0,69,2888	0/0:27,0:27:81.28:0,81,3555	1/1:2,12:14:30.10:847,30,0	0/0:24,0:24:69.18:0,69,2693	0/0:26,0:26:78.27:0,78,3486	0/0:50,0:50:99:0,148,6504	0/0:23,0:23:66.16:0,66,2809	0/0:25,0:25:72.23:0,72,3075	0/0:27,0:27:78.25:0,78,3334	1/1:2,20:22:51.17:1401,51,0	0/0:22,0:22:66.23:0,66,2873	0/0:32,0:32:96.33:0,96,4178	0/0:7,0:7:21.07:0,21,925
chr10	4321191	.	CGT	C	241.79	PASS	AB=0.945;AC=12;AF=0.273;AN=44;BaseQRankSum=3.873;DP=703;FS=5.206;HRun=0;HaplotypeScore=105.2088;InbreedingCoeff=-0.0337;MQ=64.63;MQ0=17;MQRankSum=1.121;QD=0.87;ReadPosRankSum=0.488;VQSLOD=1.7509;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:43:24.03:0,24,276	0/0:9,0:9:6.02:0,6,88	./.	./.	./.	0/1:25,2:27:11.21:11,0,176	0/1:25,1:26:40.17:40,0,216	./.	0/1:32,1:33:14.30:14,0,150	0/0:34,0:34:24.96:0,25,337	./.	0/1:23,1:24:20.22:20,0,121	0/0:17,0:16:6:0,6,68	0/0:20,0:20:9.03:0,9,131	0/0:23,0:23:2.40:0,2,42	0/1:22,2:24:11.18:11,0,211	0/0:25,0:32:2.99:0,3,26	0/0:23,0:22:15.01:0,15,157	0/0:26,0:26:3.90:0,4,43	0/0:27,0:27:12:0,12,150	1/1:57,2:61:22.44:202,22,0	0/0:25,0:25:24.07:0,24,329	0/1:15,2:17:20.34:20,0,87	0/1:23,1:24:8.16:8,0,265	0/0:14,0:14:2.87:0,3,40	0/1:24,0:25:8.56:9,0,35	1/1:14,0:17:8.52:42,9,0	./.
chr10	4321825	.	CT	C	2184.77	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.874;DP=606;FS=1.744;HRun=1;HaplotypeScore=62.7213;InbreedingCoeff=0.9915;MQ=88.06;MQ0=0;MQRankSum=-4.262;QD=34.14;ReadPosRankSum=2.412;VQSLOD=3.5684;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,36:36:93.31:1300,93,0	0/0:10,0:10:30.10:0,30,480	0/0:18,0:18:51.16:0,51,730	0/0:24,0:24:66.40:0,66,1026	0/0:25,0:25:72.25:0,72,1151	0/0:19,0:19:57.19:0,57,910	0/0:29,0:29:87.30:0,87,1391	0/0:32,0:32:96.31:0,96,1495	0/0:26,0:26:78.27:0,78,1247	0/0:17,0:17:51.17:0,51,796	0/0:12,0:12:36.11:0,36,550	0/0:15,0:15:45.15:0,45,719	0/0:17,0:17:51.17:0,51,806	0/0:12,0:12:36.12:0,36,575	0/0:28,0:28:84.29:0,84,1343	0/0:29,0:29:87.30:0,87,1391	1/1:0,28:28:72.24:1007,72,0	0/0:26,0:26:78.22:0,78,1190	0/0:24,0:24:72.25:0,72,1151	0/0:22,0:22:63.21:0,63,1004	0/0:36,0:36:99:0,108,1673	0/0:15,0:15:45.15:0,45,719	0/0:17,0:17:51.17:0,51,815	0/0:26,0:26:78.22:0,78,1219	0/0:17,0:17:48.14:0,48,719	0/0:14,0:14:42.13:0,42,648	0/0:27,0:27:81.28:0,81,1295	0/0:5,0:5:15.05:0,15,240
chr10	4321988	.	T	TA	1073.75	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-1.110;DP=680;FS=1.603;HRun=1;HaplotypeScore=82.0448;InbreedingCoeff=0.9991;MQ=82.56;MQ0=1;MQRankSum=-0.869;QD=35.79;ReadPosRankSum=1.250;VQSLOD=3.8143;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,129,1641	0/0:10,0:10:30.01:0,30,367	0/0:20,0:20:52.37:0,52,632	0/0:20,0:20:47.58:0,48,557	0/0:37,0:37:99:0,108,1385	0/0:30,0:30:87.28:0,87,1128	0/0:25,0:25:72.22:0,72,922	0/0:37,0:37:99:0,102,1308	0/0:25,0:25:72.21:0,72,907	0/0:24,0:24:72.23:0,72,923	0/0:16,0:16:39.13:0,39,506	0/0:22,0:22:66.21:0,66,857	0/0:19,0:19:51.17:0,51,662	0/0:16,0:16:45.12:0,45,556	0/0:31,0:31:93.25:0,93,1152	0/0:25,0:25:72.20:0,72,894	1/1:1,29:30:78.26:1169,78,0	0/0:15,0:15:45.11:0,45,566	0/0:27,0:27:69.01:0,69,869	0/0:12,0:12:36.09:0,36,438	0/0:22,0:21:51.16:0,51,650	0/0:14,0:14:42.14:0,42,545	0/0:14,0:14:42.12:0,42,530	0/0:21,0:21:60.20:0,60,779	0/0:42,0:42:99:0,117,1488	0/0:29,0:29:84.23:0,84,1028	0/0:36,0:36:99:0,105,1336	0/0:14,0:14:42.14:0,42,543
chr10	4322276	.	TTTTTTTTTTTTTTTC	T	129.80	PASS	AC=2;AF=0.043;AN=46;BaseQRankSum=1.663;DP=506;FS=26.648;HRun=0;HaplotypeScore=197.4104;InbreedingCoeff=0.4978;MQ=48.50;MQ0=46;MQRankSum=0.521;QD=4.64;ReadPosRankSum=-0.169;VQSLOD=1.3162;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:15,0:13:17.93:0,18,878	0/0:37,0:8:2.50:0,2,26	0/0:37,0:6:9.33:0,9,259	0/0:44,0:43:79.84:0,80,3358	0/0:18,0:17:39.57:0,40,1600	0/0:21,0:17:38.85:0,39,1699	1/1:13,15:26:4.50:207,4,0	0/0:18,0:17:36.40:0,36,1469	0/0:24,0:24:32.18:0,32,825	0/0:18,0:18:24.38:0,24,1251	0/0:9,0:9:24.50:0,24,737	0/0:8,0:7:8.71:0,9,213	0/0:7,0:7:3.01:0,3,86	0/0:20,0:20:39.70:0,40,397	0/0:17,0:17:42.06:0,42,1796	./.	0/0:18,0:15:34.84:0,35,471	0/0:30,0:26:57.49:0,57,2155	0/0:25,0:24:47.95:0,48,1867	0/0:15,0:11:14:0,14,567	0/0:8,0:8:12.65:0,13,368	0/0:20,0:18:34.47:0,34,1240	0/0:14,0:13:16.93:0,17,1202	0/0:41,0:41:21.32:0,21,819	./.	./.	./.
chr10	4322334	.	CAGGGCCTTGCT	C	1685.81	PASS	AC=8;AF=0.174;AN=46;BaseQRankSum=6.800;DP=354;FS=24.685;HRun=0;HaplotypeScore=125.3099;InbreedingCoeff=0.8685;MQ=60.99;MQ0=14;MQRankSum=-6.569;QD=28.10;ReadPosRankSum=-1.207;VQSLOD=1.1148;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:9,0:9:24.08:0,24,1311	0/0:5,0:4:12.04:0,12,554	0/0:11,0:10:2.43:0,2,451	0/0:22,0:22:57.20:0,57,3116	0/0:16,0:13:30.10:0,30,1527	0/0:19,0:19:51.18:0,51,2792	1/1:13,3:16:9.03:295,9,0	0/0:16,0:16:45.15:0,45,2343	0/0:26,0:26:66.23:0,66,3536	0/0:12,0:12:30.10:0,30,1405	0/0:8,0:8:21.07:0,21,1148	0/0:16,0:16:48.16:0,48,2528	0/0:14,0:14:42.14:0,42,2146	1/1:1,7:8:6.02:196,6,0	0/0:21,0:20:54.19:0,54,2917	./.	1/1:3,5:7:9.03:295,9,0	0/0:31,0:26:33.11:0,33,1608	0/0:8,0:8:21.07:0,21,1097	0/0:16,0:15:42.14:0,42,2209	0/0:12,0:12:36.12:0,36,1970	0/0:14,0:14:42.14:0,42,2078	0/0:11,0:10:24.08:0,24,1257	1/1:10,18:28:33.11:1038,33,0	./.	./.	./.
chr10	4322986	.	TTG	T	685.84	PASS	AC=8;AF=0.148;AN=54;BaseQRankSum=9.829;DP=527;FS=1.299;HRun=0;HaplotypeScore=103.1153;InbreedingCoeff=0.9277;MQ=63.02;MQ0=1;MQRankSum=-9.043;QD=11.82;ReadPosRankSum=1.917;VQSLOD=3.6354;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	0/0:10,0:10:24.08:0,24,411	0/0:12,0:8:14.99:0,15,171	0/0:9,0:9:16.86:0,17,229	0/0:10,0:10:27.09:0,27,458	0/0:22,0:22:63.19:0,63,1050	0/0:33,0:33:93.29:0,93,1540	0/0:11,0:11:24.08:0,24,390	0/0:26,0:26:72.23:0,72,1207	0/0:26,0:26:72.24:0,72,1207	0/0:12,0:12:27.09:0,27,461	0/0:29,0:29:84.26:0,84,1387	0/0:28,0:28:78.27:0,78,1337	0/0:25,0:25:69.22:0,69,1155	0/0:19,0:19:45.73:0,46,508	0/0:34,0:34:66.61:0,67,1179	1/1:11,0:11:9.82:109,10,0	0/0:14,0:14:17.84:0,18,216	0/0:24,0:24:66.21:0,66,1078	0/0:11,0:11:24.08:0,24,411	0/0:35,0:35:96.26:0,96,1530	0/0:16,0:16:36.12:0,36,617	0/0:15,0:15:42.14:0,42,717	0/0:22,0:22:57.15:0,57,946	0/0:17,0:17:36:0,36,428	1/1:14,8:22:4.54:395,5,0	1/1:15,0:15:29.40:239,29,0	1/1:8,2:10:14.04:88,14,0
chr10	4322991	.	TGTGTGCCCACGCAC	T	3858.55	PASS	AB=1.000;AC=7;AF=0.130;AN=54;BaseQRankSum=9.002;DP=506;FS=0.000;HRun=0;HaplotypeScore=207.0404;InbreedingCoeff=0.8143;MQ=60.53;MQ0=2;MQRankSum=-8.678;QD=70.16;ReadPosRankSum=1.233;VQSLOD=2.6931;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/0:8,0:8:24.08:0,24,1546	0/0:13,0:5:15.05:0,15,437	0/0:8,0:7:16.11:0,16,523	0/0:11,0:11:33.11:0,33,1453	0/0:22,0:22:66.23:0,66,4279	0/0:32,0:32:96.33:0,96,5055	0/0:10,0:10:30.09:0,30,1159	0/0:25,0:25:72.25:0,72,4426	0/0:26,0:26:75.26:0,75,4524	0/0:12,0:12:33.10:0,33,1926	0/0:29,0:29:84.29:0,84,5401	0/0:26,0:26:78.27:0,78,4918	0/0:26,0:26:78.22:0,78,4539	0/0:19,0:19:49.05:0,49,1331	0/0:29,0:29:46.19:0,46,4658	1/1:11,0:11:12.44:173,12,0	0/0:14,0:14:23.95:0,24,525	0/0:24,0:24:72.25:0,72,3446	0/0:9,0:9:24.08:0,24,1149	0/0:36,0:36:99:0,105,5974	0/0:13,0:13:39.13:0,39,2408	0/0:14,0:14:42.14:0,42,2589	0/0:20,0:20:57.20:0,57,3102	0/0:16,0:16:36.12:0,36,915	0/1:20,0:20:99:1662,0,154	1/1:10,5:15:29.68:1252,30,0	1/1:9,0:9:20.56:771,21,0
chr10	4322992	.	GTGTGCCCA	G	1962.07	PASS	AB=0.667;AC=7;AF=0.130;AN=54;BaseQRankSum=9.582;DP=505;FS=0.000;HRun=0;HaplotypeScore=152.7562;InbreedingCoeff=0.8235;MQ=60.72;MQ0=2;MQRankSum=-9.269;QD=37.02;ReadPosRankSum=1.584;VQSLOD=3.3133;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	0/0:8,0:8:24.08:0,24,1005	0/0:13,0:5:15.05:0,15,310	0/0:8,0:7:21.02:0,21,480	0/0:11,0:11:32.70:0,33,1020	0/0:22,0:22:66.23:0,66,2797	0/0:35,0:35:99:0,105,3854	0/0:10,0:10:30.09:0,30,917	0/0:24,0:24:72.25:0,72,3011	0/0:26,0:26:75.26:0,75,3085	0/0:12,0:12:33.10:0,33,1302	0/0:30,0:30:90.31:0,90,3812	0/0:26,0:26:78.27:0,78,3330	0/0:26,0:26:78.22:0,78,3090	0/0:19,0:19:49.03:0,49,939	0/0:28,0:28:25.28:0,25,3058	1/1:11,0:11:20.57:166,21,0	0/0:14,0:14:19.39:0,19,379	0/0:24,0:24:72.25:0,72,2535	0/0:8,0:8:24.08:0,24,888	0/0:37,0:37:99:0,108,4168	0/0:13,0:13:39.12:0,39,1612	0/0:14,0:14:42.14:0,42,1778	0/0:20,0:20:57.20:0,57,2199	0/0:16,0:16:36.12:0,36,699	0/1:10,10:20:78.88:863,0,79	1/1:5,9:14:29.76:647,30,0	1/1:2,6:8:20.56:433,21,0
chr10	4323002	.	GCACGCA	G	1340.26	PASS	AB=0.911;AC=12;AF=0.214;AN=56;BaseQRankSum=9.830;DP=506;FS=0.612;HRun=0;HaplotypeScore=137.1078;InbreedingCoeff=0.5417;MQ=58.93;MQ0=2;MQRankSum=-8.972;QD=11.55;ReadPosRankSum=0.415;VQSLOD=2.3280;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:25:0.94:2,1,0	0/0:8,0:8:24.08:0,24,745	0/0:13,0:5:15.05:0,15,215	0/0:7,0:6:8.71:0,9,146	0/0:8,0:8:21.07:0,21,602	0/0:24,0:24:72.23:0,72,2415	0/0:30,0:30:87.30:0,87,2440	0/0:8,0:8:24.07:0,24,477	0/0:24,0:24:72.22:0,72,2235	0/0:26,0:26:75.26:0,75,2443	0/0:12,0:12:33.11:0,33,1140	0/0:32,0:32:96.33:0,96,3115	0/0:26,0:26:78.25:0,78,2460	0/0:23,0:23:69.22:0,69,2247	0/1:15,0:15:83.31:83,0,133	0/0:36,0:36:73.01:0,73,2412	1/1:13,0:13:14.96:144,15,0	0/1:11,0:11:7.98:8,0,65	0/0:22,0:22:63.21:0,63,1686	0/0:8,0:8:24.08:0,24,684	0/0:39,0:39:99:0,111,3366	0/0:10,0:10:30.10:0,30,1098	0/0:14,0:14:42.14:0,42,1312	0/0:20,0:20:54.15:0,54,1433	0/1:12,0:12:0.95:1,0,140	0/1:8,10:18:99:463,0,145	1/1:5,9:14:30.07:472,30,0	1/1:2,6:8:18.06:322,18,0
chr10	4323005	.	C	CGT	688.78	PASS	AB=0.883;AC=6;AF=0.107;AN=56;BaseQRankSum=7.327;DP=529;FS=0.000;HRun=0;HaplotypeScore=113.6436;InbreedingCoeff=0.3987;MQ=59.69;MQ0=2;MQRankSum=-6.960;QD=7.33;ReadPosRankSum=-2.487;VQSLOD=2.8990;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:26:0.47:1,0,0	0/0:10,0:10:27.08:0,27,392	0/0:17,0:9:18.03:0,18,227	0/0:11,0:10:2.29:0,2,186	0/0:8,0:8:21.07:0,21,321	0/0:25,0:25:75.24:0,75,1123	0/0:29,0:29:84.27:0,84,1257	0/0:7,0:7:21.07:0,21,322	0/0:22,0:22:66.22:0,66,1008	0/0:27,0:27:78.26:0,78,1191	0/0:11,0:11:30.10:0,30,459	0/0:33,0:33:96.33:0,96,1466	0/0:28,0:28:75.25:0,75,1147	0/0:23,0:23:66.20:0,66,987	1/1:11,6:17:30.06:388,30,0	0/0:35,0:35:72.24:0,72,1103	0/0:12,0:12:8.53:0,9,63	0/1:8,2:10:34.06:111,0,34	0/0:21,0:21:60.20:0,60,917	0/0:9,0:9:24.08:0,24,367	0/0:40,0:40:99:0,108,1642	0/0:10,0:10:30.10:0,30,459	0/0:15,0:15:45.14:0,45,661	0/0:19,0:19:48.12:0,48,709	0/1:8,6:14:3.43:222,0,3	0/1:27,0:27:89.78:90,0,290	0/0:15,0:15:12.88:0,13,124	0/0:8,0:8:16.56:0,17,73
chr10	4323010	.	G	GCC	539.25	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=6.557;DP=526;FS=0.844;HRun=1;HaplotypeScore=107.1775;InbreedingCoeff=0.9087;MQ=61.55;MQ0=2;MQRankSum=-5.053;QD=8.84;ReadPosRankSum=-2.204;VQSLOD=-0.4871;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:28:0.31:0,0,1	0/0:13,0:13:39.13:0,39,586	0/0:19,0:11:20.24:0,20,333	0/0:11,0:10:17.63:0,18,314	0/0:9,0:9:24.06:0,24,342	0/0:24,0:24:69.23:0,69,1055	0/0:29,0:29:78.20:0,78,1140	0/0:9,0:9:24.08:0,24,364	0/0:21,0:21:63.21:0,63,964	0/0:26,0:26:75.25:0,75,1126	0/0:10,0:10:30.10:0,30,459	0/0:33,0:33:99:0,99,1430	0/0:27,0:27:78.26:0,78,1190	0/0:22,0:22:66.22:0,66,1008	1/1:9,6:15:24.14:258,24,0	0/0:37,0:37:75.24:0,75,1127	0/0:11,0:11:10.78:0,11,58	1/1:5,2:7:12.88:142,13,0	0/0:20,0:20:54.17:0,54,785	0/0:10,0:10:30.09:0,30,431	0/0:40,0:40:99:0,111,1626	0/0:10,0:10:30.10:0,30,459	0/0:16,0:16:45.13:0,45,663	0/0:18,0:18:51.17:0,51,773	1/1:5,6:11:21.95:277,22,0	0/0:26,0:26:59.72:0,60,430	0/0:16,0:16:32.27:0,32,243	0/0:8,0:8:17.72:0,18,114
chr10	4324252	.	CAT	C	3395.97	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=11.793;DP=811;FS=0.453;HRun=0;HaplotypeScore=94.0892;InbreedingCoeff=0.9999;MQ=88.44;MQ0=0;MQRankSum=-2.408;QD=40.43;ReadPosRankSum=2.690;VQSLOD=5.5284;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,159,3058	0/0:20,0:20:60.13:0,60,1014	0/0:25,0:25:69.16:0,69,1253	0/0:33,0:33:92.72:0,93,1656	0/0:31,0:31:93.32:0,93,1872	0/0:23,0:23:69.20:0,69,1325	0/0:25,0:25:75.26:0,75,1494	0/0:49,0:49:99:0,147,2792	0/0:14,0:14:42.13:0,42,815	0/0:45,0:45:99:0,132,2472	0/0:34,0:34:99:0,102,1981	0/0:22,0:22:66.17:0,66,1248	0/0:25,0:25:75.24:0,75,1469	0/0:25,0:25:75.23:0,75,1450	0/0:33,0:33:99:0,99,1898	0/0:31,0:31:93.31:0,93,1816	0/0:24,0:24:69.17:0,69,1284	0/0:19,0:19:57.12:0,57,1076	0/0:23,0:23:66.20:0,66,1249	0/0:25,0:25:75.26:0,75,1521	0/0:50,0:50:99:0,147,2881	0/0:24,0:24:69.24:0,69,1399	0/0:20,0:20:60.16:0,60,1108	0/0:35,0:35:99:0,102,1941	0/0:19,0:19:57.20:0,57,1157	1/1:0,32:32:90.19:1407,90,0	1/1:0,34:34:90.31:1454,90,0	1/1:0,18:18:33.11:535,33,0
chr10	4324365	.	T	TA	1046.15	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-8.766;DP=635;FS=14.851;HRun=10;HaplotypeScore=65.3706;InbreedingCoeff=0.9931;MQ=80.88;MQ0=0;MQRankSum=-1.000;QD=15.85;ReadPosRankSum=2.321;VQSLOD=2.6465;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,31:39:24.20:580,24,0	0/0:10,0:10:23.97:0,24,197	0/0:21,0:22:49.79:0,50,387	0/0:19,0:20:18.38:0,18,148	0/0:26,0:26:32.80:0,33,267	0/0:21,0:21:41.86:0,42,341	0/0:14,0:14:38.93:0,39,317	0/0:36,0:36:89.84:0,90,737	0/0:15,0:15:38.92:0,39,320	0/0:21,0:21:44.86:0,45,366	0/0:20,0:20:38.91:0,39,320	0/0:20,0:20:53.90:0,54,437	0/0:16,0:16:41.95:0,42,345	0/0:28,0:30:75.93:0,76,594	0/0:16,0:16:35.92:0,36,293	0/0:23,1:25:38.95:0,39,513	1/1:3,24:27:39.06:587,39,0	0/0:11,0:11:29.95:0,30,246	0/0:19,0:20:46.97:0,47,373	0/0:26,0:27:70.92:0,71,572	0/0:16,0:17:34.94:0,35,273	0/0:20,0:21:52.94:0,53,424	0/0:23,0:24:33.63:0,34,358	0/0:16,0:16:40.95:0,41,318	0/0:29,0:29:56.79:0,57,465	0/0:35,0:35:74.82:0,75,614	0/0:37,0:37:92.85:0,93,763	0/0:20,0:20:50.92:0,51,418
chr10	4324915	.	A	AGTTGT	8547.89	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=1.562;DP=719;FS=7.149;HRun=0;HaplotypeScore=129.3994;InbreedingCoeff=0.9590;MQ=84.39;MQ0=0;MQRankSum=-11.021;QD=71.83;ReadPosRankSum=0.136;VQSLOD=6.4034;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,28:29:75.12:2171,75,0	0/0:16,0:16:45.14:0,45,890	0/0:26,0:25:69.22:0,69,1387	0/0:27,0:27:69.20:0,69,1354	0/0:26,0:26:72.25:0,72,1494	0/0:37,0:37:99:0,102,1951	0/0:17,0:17:48.16:0,48,982	0/0:30,0:30:84.28:0,84,1730	0/0:22,0:22:66.23:0,66,1384	0/0:35,0:35:99:0,99,2010	0/0:19,0:19:51.18:0,51,1069	0/0:29,0:29:81.25:0,81,1623	0/0:27,0:27:69.22:0,69,1408	0/0:20,0:20:60.21:0,60,1245	0/0:37,0:36:99:0,102,2010	0/0:21,0:21:60.18:0,60,1185	1/1:0,13:14:27.01:759,27,0	0/0:17,0:17:51.14:0,51,1034	0/0:21,0:21:54.13:0,54,1010	0/0:24,0:24:69.22:0,69,1409	0/0:35,0:35:96.31:0,96,1962	0/0:32,0:32:84.29:0,84,1762	0/0:22,0:22:66.19:0,66,1306	0/0:24,0:25:66.23:0,66,1385	0/0:35,0:35:99:0,102,1948	1/1:1,17:24:3.17:1362,3,0	1/1:2,39:42:99:3330,108,0	1/1:0,10:10:30.10:926,30,0
chr10	4325563	.	C	CTTTG	3081.75	PASS	AB=0.609;AC=9;AF=0.161;AN=56;BaseQRankSum=0.088;DP=650;FS=3.058;HRun=0;HaplotypeScore=89.6717;InbreedingCoeff=0.7939;MQ=61.19;MQ0=12;MQRankSum=-9.027;QD=29.92;ReadPosRankSum=-1.833;VQSLOD=3.2282;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,22:22:6.02:160,6,0	0/0:9,0:9:27.09:0,27,504	0/0:26,0:10:15.05:0,15,280	0/0:28,0:12:22.67:0,23,347	0/0:37,0:37:99:0,108,2008	0/0:20,0:20:60.21:0,60,1110	0/0:31,0:31:84.29:0,84,1558	0/0:22,0:22:60.21:0,60,1120	0/0:27,0:27:72.25:0,72,1344	0/0:20,0:20:57.17:0,57,1004	0/0:17,0:17:48.16:0,48,877	0/0:24,0:24:57.20:0,57,1064	0/0:29,0:29:81.26:0,81,1479	0/0:27,0:26:72.25:0,72,1337	0/0:31,0:31:84.29:0,84,1568	0/0:17,0:17:48.16:0,48,889	1/1:1,8:8:6.02:160,6,0	0/0:27,0:26:72.18:0,72,1268	0/0:19,0:13:33.11:0,33,608	0/0:22,0:22:57.15:0,57,963	0/0:25,0:25:69.24:0,69,1288	0/0:15,0:15:45.15:0,45,840	0/0:17,0:17:45.15:0,45,840	0/0:35,0:35:96.27:0,96,1718	0/0:21,0:21:60.18:0,60,1052	0/1:10,17:27:92.76:1618,0,93	1/1:4,31:32:42.14:1012,42,0	1/1:1,3:4:12.04:282,12,0
chr10	4325966	.	G	GCCCATGATGTAGA	10219.92	PASS	AB=0.658;AC=9;AF=0.161;AN=56;BaseQRankSum=-1.251;DP=691;FS=17.946;HRun=0;HaplotypeScore=237.5845;InbreedingCoeff=0.8371;MQ=65.64;MQ0=1;MQRankSum=-11.849;QD=126.17;ReadPosRankSum=1.004;VQSLOD=3.6586;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,8:15:36.12:2328,36,0	0/0:9,0:9:24.08:0,24,945	0/0:18,0:18:33.71:0,34,1263	0/0:19,0:19:50.18:0,50,1283	0/0:27,0:27:63.13:0,63,2249	0/0:9,0:9:24.08:0,24,792	0/0:31,0:31:84.29:0,84,3182	0/0:26,0:26:69.23:0,69,2328	0/0:27,0:27:81.26:0,81,3071	0/0:33,0:33:93.29:0,93,3199	0/0:14,0:14:39.09:0,39,1344	0/0:36,0:36:99:0,102,3754	0/0:31,0:31:90.07:0,90,3273	0/0:30,0:30:87.29:0,87,3184	0/0:26,0:26:72.25:0,72,2778	0/0:36,0:36:99:0,99,3874	1/1:5,10:13:36.12:2179,36,0	0/0:29,0:29:84.23:0,84,3088	0/0:26,0:26:66.21:0,66,2301	0/0:17,0:17:51.17:0,51,1769	0/0:81,0:81:99:0,229,8878	0/0:21,0:21:42.10:0,42,1368	0/0:18,0:17:51.15:0,51,1732	0/0:29,0:29:75.26:0,75,2827	0/0:16,0:16:48.12:0,48,1647	0/1:12,12:21:65.69:3077,0,66	1/1:11,6:18:36.12:2359,36,0	1/1:3,0:2:6.02:277,6,0
chr10	4326323	.	TAAA	T	2511.10	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=7.358;DP=543;FS=17.714;HRun=10;HaplotypeScore=72.8894;InbreedingCoeff=0.9359;MQ=57.78;MQ0=13;MQRankSum=-1.066;QD=32.19;ReadPosRankSum=1.452;VQSLOD=1.1871;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:19:26.90:0,27,209	0/0:5,0:5:15.05:0,15,311	0/0:8,0:9:27:0,27,336	0/0:10,0:6:8.29:0,8,221	0/0:29,0:27:60.21:0,60,1244	0/0:17,0:17:48.16:0,48,962	0/0:9,0:8:18.02:0,18,331	0/0:31,0:30:81.18:0,81,1505	0/0:18,0:16:36.11:0,36,710	0/0:30,0:29:78.20:0,78,1501	0/0:22,0:23:69.20:0,69,1316	0/0:12,0:12:27.09:0,27,537	0/0:19,0:18:42.14:0,42,871	0/0:18,0:17:42.14:0,42,833	0/0:13,0:12:36.09:0,36,688	0/0:18,0:15:36.12:0,36,747	0/0:4,0:18:38.85:0,39,302	0/0:17,0:17:42.10:0,42,793	0/0:24,0:23:69.21:0,69,1357	0/0:36,0:36:99:0,105,2047	0/0:7,0:7:12.02:0,12,210	0/0:7,0:7:9.03:0,9,187	0/0:30,0:27:69.24:0,69,1413	0/0:10,0:9:21.07:0,21,418	0/0:29,0:29:84.29:0,84,1742	1/1:5,33:37:40.08:1284,40,0	1/1:3,27:29:72.24:982,72,0	1/1:0,10:10:30.05:387,30,0
chr10	4328288	.	T	TTGTGTG	2961.31	PASS	AB=1.000;AC=20;AF=0.370;AN=54;BaseQRankSum=3.768;DP=635;FS=3.830;HRun=0;HaplotypeScore=155.9801;InbreedingCoeff=0.7918;MQ=58.57;MQ0=9;MQRankSum=-5.009;QD=12.60;ReadPosRankSum=-3.508;VQSLOD=2.1245;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:35,1:36:24.03:466,24,0	1/1:3,0:3:6.02:108,6,0	./.	0/1:32,0:19:0:0,0,0	0/0:22,0:24:27.08:0,27,460	0/0:19,0:19:11.65:0,12,166	0/0:22,0:22:24.05:0,24,412	0/1:29,0:29:26.72:27,0,93	0/0:20,0:20:18.04:0,18,327	0/0:20,0:20:5.92:0,6,86	0/0:16,0:17:9.01:0,9,128	0/0:32,0:32:24.54:0,25,492	0/0:22,0:22:15.04:0,15,303	0/0:20,0:20:26.76:0,27,509	1/1:13,4:24:12.04:385,12,0	0/0:19,0:20:6.72:0,7,467	1/1:12,0:25:25.55:310,26,0	1/1:11,0:11:15.52:298,16,0	0/0:23,0:21:4.94:0,5,119	0/0:22,0:22:17.66:0,18,270	0/0:47,0:46:44.47:0,44,740	0/0:18,0:18:17.95:0,18,319	0/0:21,0:20:24.07:0,24,440	0/0:22,0:23:36.10:0,36,671	1/1:20,0:20:27.09:653,27,0	1/1:17,0:17:15.03:290,15,0	1/1:27,0:26:17.96:423,18,0	1/1:11,0:11:10.56:199,11,0
chr10	4331528	.	G	GAT	1840.42	PASS	AB=0.865;AC=10;AF=0.179;AN=56;BaseQRankSum=0.097;DP=680;FS=7.566;HRun=0;HaplotypeScore=60.9569;InbreedingCoeff=0.4852;MQ=50.58;MQ0=53;MQRankSum=-5.315;QD=14.61;ReadPosRankSum=-0.497;VQSLOD=2.4034;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,4:5:12.04:224,12,0	0/0:15,0:14:42.13:0,42,599	0/1:21,1:5:58.74:68,0,59	0/1:20,0:8:25.87:92,0,26	0/0:39,0:35:78.15:0,78,1140	0/0:30,0:29:63.21:0,63,917	0/0:17,0:15:21.07:0,21,300	0/0:82,0:35:93.31:0,93,1359	0/0:16,0:15:39.12:0,39,555	0/0:26,0:26:72.24:0,72,1060	0/0:24,0:20:42.14:0,42,617	0/0:19,0:17:27.09:0,27,397	0/0:27,0:26:54.04:0,54,791	0/0:15,0:15:39.13:0,39,573	0/0:16,0:16:33.11:0,33,480	0/0:17,0:17:42.14:0,42,612	1/1:12,4:7:9.03:168,9,0	0/0:26,0:24:36.12:0,36,526	0/0:42,0:25:75.25:0,75,1102	0/0:31,0:22:51.17:0,51,740	0/0:26,0:19:45.15:0,45,662	0/0:26,0:26:60.20:0,60,882	0/0:31,0:27:63.16:0,63,901	0/0:17,0:16:30.10:0,30,439	0/0:12,0:12:27.09:0,27,391	0/1:4,5:7:26.12:262,0,26	1/1:7,21:26:63.15:1135,63,0	0/1:15,1:10:38.14:50,0,38
chr10	4332168	.	A	AT	205.82	PASS	AC=4;AF=0.077;AN=52;BaseQRankSum=0.798;DP=628;FS=19.591;HRun=5;HaplotypeScore=56.2909;InbreedingCoeff=0.9592;MQ=53.61;MQ0=12;MQRankSum=-4.826;QD=6.64;ReadPosRankSum=0.204;VQSLOD=-0.3811;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:29:45.07:0,45,471	0/0:11,0:11:18.04:0,18,193	0/0:19,0:12:33.06:0,33,352	0/0:20,0:9:24.05:0,24,248	0/0:36,0:36:65.96:0,66,701	0/0:18,0:18:36.09:0,36,387	0/0:19,1:20:51.13:0,51,546	0/0:32,0:24:69.13:0,69,722	0/0:23,0:23:48.10:0,48,507	0/0:41,0:41:99:0,114,1213	0/0:33,0:33:63.03:0,63,677	0/0:20,0:20:35.99:0,36,387	0/0:29,0:29:63.03:0,63,677	0/0:20,0:19:42.08:0,42,443	0/0:30,0:30:72.18:0,72,774	0/0:21,0:21:50.29:0,50,538	./.	0/0:22,0:21:38.97:0,39,401	0/0:15,0:13:30.07:0,30,323	0/0:37,0:35:93.23:0,93,999	0/0:29,0:29:66.16:0,66,709	0/0:33,0:33:69.17:0,69,741	0/0:18,0:18:33.08:0,33,354	0/0:23,0:22:45.11:0,45,484	0/0:13,0:13:21.05:0,21,226	1/1:0,9:6:12.04:158,12,0	1/1:3,19:19:12.04:158,12,0	./.
chr10	4335418	.	A	ATT	2108.86	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=13.363;DP=628;FS=0.448;HRun=8;HaplotypeScore=82.4600;InbreedingCoeff=0.9695;MQ=67.80;MQ0=0;MQRankSum=-1.241;QD=21.74;ReadPosRankSum=-0.540;VQSLOD=2.4323;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:78.16:0,78,849	0/0:11,0:11:27.07:0,27,301	0/0:13,0:12:20.87:0,21,207	0/0:6,0:5:6:0,6,60	0/0:41,0:41:99:0,108,1184	0/0:20,0:20:48.12:0,48,535	0/0:19,0:19:48.12:0,48,535	1/1:7,0:41:85.56:307,86,0	0/0:17,0:17:48.09:0,48,513	0/0:31,0:31:78.17:0,78,848	0/0:39,0:39:99:0,102,1137	0/0:16,0:16:48.09:0,48,513	0/0:19,0:19:48.10:0,48,535	0/0:16,0:16:48.13:0,48,535	1/1:2,17:21:51.16:772,51,0	0/0:17,0:17:42.08:0,42,451	0/0:24,0:24:69.18:0,69,769	1/1:1,12:13:27.09:429,27,0	0/0:22,0:22:60.14:0,60,653	0/0:21,0:21:57.15:0,57,635	0/0:21,0:21:54.11:0,54,592	0/0:17,0:17:51.14:0,51,568	0/0:23,0:24:50.83:0,51,547	0/0:13,0:13:39.11:0,39,434	1/1:3,19:21:48.16:762,48,0	0/0:40,0:40:99:0,108,1197	0/0:39,0:39:99:0,111,1227	0/0:16,0:16:39.10:0,39,434
chr10	4337335	.	C	CAAGGATGTCAGGTTCTTTTTCT	16880.33	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=2.558;DP=646;FS=7.935;HRun=0;HaplotypeScore=346.5874;InbreedingCoeff=0.9991;MQ=80.74;MQ0=0;MQRankSum=-12.973;QD=165.49;ReadPosRankSum=-2.989;VQSLOD=3.2109;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:81.28:0,81,4446	0/0:8,0:8:24.08:0,24,1243	0/0:31,0:31:87.25:0,87,3485	0/0:19,0:19:51.04:0,51,2046	0/0:26,0:26:75.26:0,75,4126	0/0:36,0:36:99:0,105,5345	0/0:22,0:22:63.19:0,63,3225	1/1:41,0:41:99:5959,117,0	0/0:16,0:16:45.14:0,45,2220	0/0:35,0:35:99:0,102,5312	0/0:25,0:25:75.26:0,75,4162	0/0:18,0:18:54.19:0,54,3172	0/0:22,0:22:63.22:0,63,3297	0/0:15,0:15:45.15:0,45,2651	1/1:13,8:21:51.18:4043,51,0	0/0:11,0:11:33.11:0,33,1673	0/0:13,0:13:39.13:0,39,2105	1/1:8,2:11:30.10:2211,30,0	0/0:18,0:18:48.16:0,48,2241	0/0:43,0:43:99:0,120,6704	0/0:19,0:19:57.19:0,57,2925	0/0:31,0:31:87.30:0,87,4954	0/0:12,0:12:36.08:0,36,1581	0/0:18,0:18:51.15:0,51,2253	1/1:13,11:29:57.20:4667,57,0	0/0:27,0:27:78.24:0,78,3980	0/0:31,0:31:90.29:0,90,4820	0/0:20,0:20:54.18:0,54,2985
chr10	4338762	.	CT	C	808.12	PASS	AB=0.820;AC=10;AF=0.179;AN=56;BaseQRankSum=3.270;DP=414;FS=20.825;HRun=12;HaplotypeScore=54.2691;InbreedingCoeff=0.4712;MQ=65.92;MQ0=22;MQRankSum=-5.392;QD=6.46;ReadPosRankSum=1.356;VQSLOD=0.5046;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:17,21:37:22.10:199,0,22	0/0:1,0:1:3.01:0,3,30	0/0:43,0:11:3:0,3,26	0/0:35,0:14:2.83:0,3,83	0/0:21,1:20:21.19:0,21,364	0/0:14,0:14:26.92:0,27,253	0/0:10,0:9:14.04:0,14,119	0/0:19,0:16:33.03:0,33,324	0/0:5,1:6:11.83:0,12,83	0/0:13,1:14:6.86:0,7,241	0/0:12,0:12:17.89:0,18,156	0/0:4,0:4:6.01:0,6,61	0/1:3,0:3:12.54:13,0,25	0/0:8,0:8:11.86:0,12,105	0/0:5,0:5:11.96:0,12,109	0/0:4,0:4:12.02:0,12,122	1/1:7,11:18:17.82:139,18,0	0/0:16,0:16:28.61:0,29,277	0/0:25,0:21:30.48:0,30,348	0/0:14,0:14:30:0,30,292	0/0:5,0:5:8.81:0,9,64	0/0:2,0:2:6.01:0,6,61	0/0:8,0:8:2.80:0,3,158	0/0:6,0:6:6.48:0,6,62	0/0:15,0:15:29.68:0,30,269	1/1:7,12:19:2.63:202,3,0	1/1:11,8:18:7.89:122,8,0	1/1:12,14:22:37.67:283,38,0
chr10	4338889	.	T	TG	311.61	PASS	AB=0.979;AC=10;AF=0.179;AN=56;BaseQRankSum=5.332;DP=515;FS=2.451;HRun=0;HaplotypeScore=45.6785;InbreedingCoeff=0.6103;MQ=53.30;MQ0=51;MQRankSum=-3.084;QD=4.00;ReadPosRankSum=-1.103;VQSLOD=3.0086;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:45:99:0,129,1778	0/0:11,0:11:33.11:0,33,461	0/1:30,0:22:60.46:60,0,702	0/1:22,1:18:81.30:81,0,502	0/0:23,0:18:51.17:0,51,710	0/0:18,0:16:39.13:0,39,545	0/0:24,0:24:66.22:0,66,919	1/1:3,1:1:3.01:43,3,0	0/0:15,0:12:24.06:0,24,317	0/0:18,0:15:45.15:0,45,616	0/0:19,0:19:57.19:0,57,789	0/0:13,0:9:24.08:0,24,336	0/0:17,0:16:45.15:0,45,629	0/0:15,0:13:33.11:0,33,462	1/1:3,3:5:6.02:86,6,0	0/0:12,0:11:30.10:0,30,420	0/0:37,0:35:99:0,99,1381	1/1:5,2:3:3.01:41,3,0	0/0:23,0:21:60.14:0,60,794	0/0:17,0:17:48.15:0,48,649	0/0:21,0:21:54.18:0,54,755	0/0:10,0:9:21.07:0,21,294	0/0:11,0:10:30.10:0,30,419	0/0:27,0:25:60.20:0,60,839	1/1:2,6:8:10.88:143,11,0	0/0:22,0:16:48.15:0,48,657	0/0:26,0:24:63.21:0,63,880	0/0:9,0:8:24.08:0,24,336
chr10	4338950	.	C	CCA	1609.42	PASS	AB=0.738;AC=5;AF=0.089;AN=56;BaseQRankSum=8.453;DP=500;FS=27.976;HRun=0;HaplotypeScore=73.6704;InbreedingCoeff=0.2992;MQ=66.03;MQ0=1;MQRankSum=-7.226;QD=24.02;ReadPosRankSum=0.554;VQSLOD=1.9984;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,120,1940	0/0:11,0:11:30.08:0,30,437	0/0:16,0:12:33.06:0,33,479	0/0:18,0:16:36.05:0,36,528	0/0:17,0:17:48.12:0,48,750	0/0:13,0:13:39.12:0,39,606	0/0:23,0:23:60.20:0,60,955	0/1:25,1:26:99:176,0,623	0/0:13,0:13:33.11:0,33,526	0/0:14,0:14:42.14:0,42,681	0/0:10,0:10:27.08:0,27,411	0/0:12,0:12:33.11:0,33,517	0/0:13,0:13:33.10:0,33,511	0/0:14,0:14:39.12:0,39,613	0/1:7,11:18:99:718,0,140	0/0:14,0:14:42.12:0,42,638	0/0:39,0:39:99:0,117,1791	1/1:6,0:6:8.86:158,9,0	0/0:19,0:18:51.12:0,51,777	0/0:18,0:18:51.16:0,51,806	0/0:29,0:29:84.27:0,84,1318	0/0:6,0:6:18.02:0,18,265	0/0:14,0:14:39.13:0,39,635	0/0:24,0:24:66.20:0,66,1028	0/1:7,10:17:99:675,0,147	0/0:22,0:22:60.20:0,60,955	0/0:24,0:24:69.22:0,69,1083	0/0:9,0:9:27.09:0,27,439
chr10	4339455	.	A	AG	1750.32	PASS	AB=1.000;AC=12;AF=0.214;AN=56;BaseQRankSum=9.894;DP=416;FS=2.339;HRun=1;HaplotypeScore=48.9894;InbreedingCoeff=0.4102;MQ=69.18;MQ0=0;MQRankSum=-3.702;QD=10.30;ReadPosRankSum=3.616;VQSLOD=1.6943;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,24:25:60.20:897,60,0	0/0:7,0:7:21.04:0,21,233	0/0:13,0:13:19.79:0,20,251	0/0:8,0:7:12.01:0,12,126	0/0:29,0:29:84.03:0,84,965	0/0:19,0:19:54.17:0,54,697	0/0:8,0:8:24.08:0,24,311	0/1:34,0:34:39.88:155,0,40	0/0:10,0:10:24.08:0,24,311	0/0:23,0:23:66.13:0,66,802	0/0:17,0:17:51.16:0,51,647	0/0:2,0:2:5.99:0,6,60	0/0:11,0:11:33.09:0,33,412	0/0:10,0:10:24.08:0,24,311	0/1:13,0:13:16.62:83,0,17	0/0:16,0:16:48.13:0,48,594	0/1:24,0:24:13.33:182,0,13	0/1:19,0:19:26.55:133,0,27	0/0:19,0:19:57.18:0,57,728	0/0:15,0:15:45.13:0,45,569	0/0:9,0:9:27.09:0,27,350	0/0:9,0:9:24.06:0,24,297	0/0:12,0:12:36.12:0,36,466	0/0:8,0:8:18.06:0,18,233	0/1:11,0:11:1.52:65,0,2	1/1:14,0:14:34.56:127,35,0	1/1:21,0:19:52.30:258,52,0	0/1:9,0:9:18.46:18,0,93
chr10	4339456	.	G	GT	4760.32	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-8.567;DP=421;FS=4.389;HRun=7;HaplotypeScore=39.9079;InbreedingCoeff=0.9500;MQ=69.19;MQ0=0;MQRankSum=-0.278;QD=27.20;ReadPosRankSum=1.870;VQSLOD=5.3025;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:25:59.28:396,59,0	0/0:8,0:8:12.01:0,12,116	0/0:14,0:13:14.79:0,15,168	0/0:8,0:7:8.98:0,9,79	0/0:28,0:28:63.09:0,63,608	0/0:19,0:19:54.09:0,54,521	0/0:8,0:8:24.04:0,24,232	1/1:4,29:33:84.21:970,84,0	0/0:9,0:9:27.03:0,27,255	0/0:23,0:23:60.09:0,60,575	0/0:17,0:17:51.08:0,51,492	0/0:2,0:2:3:0,3,29	0/0:11,0:11:33.05:0,33,318	0/0:10,0:10:24.03:0,24,232	1/1:3,11:14:33.10:399,33,0	0/0:16,0:16:42.07:0,42,406	1/1:3,23:27:60.18:724,60,0	1/1:4,16:20:48.15:580,48,0	0/0:20,0:20:54.08:0,54,522	0/0:15,0:15:45.07:0,45,434	0/0:9,0:9:27.04:0,27,261	0/0:9,0:9:24.02:0,24,226	0/0:12,0:12:36.06:0,36,348	0/0:8,0:8:23.94:0,24,213	1/1:2,10:12:27.08:326,27,0	1/1:0,14:14:42.13:507,42,0	1/1:0,20:19:60.17:713,60,0	1/1:5,4:9:12.04:145,12,0
chr10	4339702	.	CT	C	482.51	PASS	AB=0.955;AC=8;AF=0.143;AN=56;BaseQRankSum=3.644;DP=457;FS=9.310;HRun=12;HaplotypeScore=56.9100;InbreedingCoeff=0.5221;MQ=60.81;MQ0=2;MQRankSum=1.141;QD=6.52;ReadPosRankSum=2.360;VQSLOD=1.2083;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:20:17.67:0,18,97	0/0:5,0:6:5.17:0,5,85	0/1:12,0:8:5.15:5,0,58	0/1:18,2:13:11.70:12,0,77	0/0:27,0:26:75.14:0,75,754	0/0:23,0:24:62.96:0,63,622	0/0:10,1:12:6.65:0,7,229	0/0:42,1:46:75.62:0,76,870	0/0:16,1:17:9.82:0,10,276	0/0:18,0:18:48.05:0,48,472	0/0:14,0:14:24.04:0,24,239	0/0:15,0:15:22.87:0,23,271	0/0:14,0:19:36.02:0,36,354	0/0:15,0:15:36.02:0,36,350	1/1:7,16:23:44.78:348,45,0	0/0:18,0:19:44.62:0,45,404	0/0:18,1:22:19.45:0,19,430	1/1:2,11:13:0.07:158,0,0	0/0:18,0:21:43.31:0,43,399	0/0:15,1:16:36.04:0,36,356	0/0:12,1:13:23.97:0,24,222	0/0:1,0:1:3.01:0,3,30	0/0:3,0:3:6.01:0,6,61	0/0:5,0:9:20.71:0,21,180	1/1:2,4:6:11.95:93,12,0	0/0:5,0:13:23.29:0,23,137	0/0:6,0:20:34.09:0,34,184	0/0:2,0:10:20.01:0,20,106
chr10	4340290	.	T	TG	4716.08	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-9.766;DP=693;FS=3.941;HRun=2;HaplotypeScore=66.5066;InbreedingCoeff=0.9862;MQ=63.10;MQ0=4;MQRankSum=-0.589;QD=38.34;ReadPosRankSum=-0.223;VQSLOD=5.2872;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:81.26:0,81,1043	0/0:12,0:12:33.11:0,33,428	0/0:34,0:28:81.26:0,81,1050	0/0:20,0:19:10.65:0,11,530	0/0:22,0:22:63.20:0,63,816	0/0:28,0:28:81.26:0,81,1052	0/0:24,0:24:72.23:0,72,934	1/1:6,26:23:57.19:848,57,0	0/0:20,0:20:60.20:0,60,779	0/0:27,0:27:81.22:0,81,1009	0/0:22,0:22:63.19:0,63,800	0/0:22,0:22:66.21:0,66,855	0/0:24,0:24:69.22:0,69,891	0/0:24,0:24:72.23:0,72,931	1/1:1,45:46:99:1933,129,0	0/0:32,0:32:96.30:0,96,1233	0/0:32,0:33:44.28:0,44,1044	1/1:2,22:24:69.19:1009,69,0	0/0:18,0:17:42.78:0,43,616	0/0:25,0:24:69.18:0,69,874	0/0:15,0:15:45.11:0,45,553	0/0:20,0:20:57.19:0,57,739	0/0:20,0:20:60.20:0,60,778	0/0:32,0:32:90.29:0,90,1168	1/1:1,20:21:63.20:926,63,0	0/0:22,0:22:63.18:0,63,800	0/0:40,0:38:99:0,111,1441	0/0:6,0:6:18.06:0,18,234
chr10	4343191	.	C	CT	1924.11	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-5.764;DP=647;FS=28.766;HRun=2;HaplotypeScore=65.0006;InbreedingCoeff=0.9975;MQ=84.77;MQ0=0;MQRankSum=-9.794;QD=38.48;ReadPosRankSum=-0.580;VQSLOD=1.3235;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,114,1410	0/0:11,0:11:30.09:0,30,372	0/0:21,0:21:60.14:0,60,697	0/0:22,0:22:53.55:0,54,559	0/0:23,0:23:66.21:0,66,818	0/0:24,0:23:63.18:0,63,767	0/0:24,0:24:72.18:0,72,852	1/1:0,11:11:33.11:471,33,0	0/0:32,0:32:93.29:0,93,1151	0/0:28,0:28:81.24:0,81,984	0/0:19,0:19:57.18:0,57,706	0/0:26,0:26:75.22:0,75,917	0/0:17,0:17:45.10:0,45,528	0/0:24,0:24:66.21:0,66,818	1/1:0,6:6:18.06:258,18,0	0/0:25,0:25:72.21:0,72,879	0/0:29,0:29:75.23:0,75,930	1/1:0,12:12:36.08:494,36,0	0/0:34,0:34:93.22:0,93,1079	0/0:23,0:23:63.18:0,63,768	0/0:33,0:33:99:0,99,1200	0/0:27,0:27:78.24:0,78,966	0/0:27,0:27:78.23:0,78,953	0/0:23,0:23:69.22:0,69,854	1/1:0,21:21:60.20:860,60,0	0/0:18,0:18:51.15:0,51,621	0/0:31,0:31:87.23:0,87,1039	0/0:16,0:16:39.09:0,39,456
chr10	4343207	.	T	TG	1926.70	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=6.911;DP=635;FS=17.986;HRun=2;HaplotypeScore=68.6656;InbreedingCoeff=0.9982;MQ=92.93;MQ0=0;MQRankSum=-10.949;QD=32.66;ReadPosRankSum=-2.236;VQSLOD=1.5189;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,108,1339	0/0:8,0:8:24.08:0,24,298	0/0:31,0:31:86.55:0,87,974	0/0:26,0:26:72.16:0,72,850	0/0:26,0:26:75.22:0,75,910	0/0:24,0:23:72.23:0,72,893	0/0:28,0:28:81.25:0,81,1001	1/1:6,12:18:44.92:582,45,0	0/0:30,0:30:90.28:0,90,1115	0/0:20,0:20:60.19:0,60,743	0/0:21,0:21:63.19:0,63,769	0/0:22,0:22:63.20:0,63,781	0/0:11,0:11:33.10:0,33,409	0/0:24,0:24:69.22:0,69,855	1/1:3,15:18:42.14:602,42,0	0/0:24,0:24:69.22:0,69,856	0/0:30,0:30:90.26:0,90,1100	1/1:0,9:9:21.07:301,21,0	0/0:35,0:35:99:0,102,1261	0/0:24,0:24:63.15:0,63,751	0/0:32,0:31:84.26:0,84,1040	0/0:27,0:27:75.22:0,75,915	0/0:22,0:22:63.20:0,63,777	0/0:19,0:19:57.18:0,57,707	1/1:0,14:14:42.14:602,42,0	0/0:20,0:20:54.16:0,54,659	0/0:20,0:20:60.19:0,60,744	0/0:15,0:15:42.12:0,42,508
chr10	4344042	.	TCAG	T	896.41	PASS	AB=0.953;AC=6;AF=0.273;AN=22;BaseQRankSum=5.493;DP=529;FS=0.783;HRun=0;HaplotypeScore=73.5625;InbreedingCoeff=0.6872;MQ=58.98;MQ0=7;MQRankSum=-0.758;QD=9.54;ReadPosRankSum=-0.099;VQSLOD=2.7709;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	./.	./.	0/0:40,0:40:51.14:0,51,906	./.	0/0:14,0:28:33.11:0,33,459	./.	./.	0/0:24,0:24:39.13:0,39,727	0/1:17,1:18:0.13:0,0,582	0/1:22,1:23:0.09:0,0,647	1/1:13,12:25:36.12:471,36,0	0/0:23,0:23:33.11:0,33,630	0/0:18,0:25:8.90:0,9,114	1/1:11,17:28:22.01:526,22,0	./.	./.	./.	./.	./.	0/0:33,2:35:8.93:0,9,815	./.	./.	0/0:24,0:24:42.14:0,42,765	./.
chr10	4345050	.	T	TAAATAAATAAATAAATAAAA	3729.71	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=6.456;DP=400;FS=0.459;HRun=0;HaplotypeScore=197.3683;InbreedingCoeff=0.3592;MQ=57.39;MQ0=2;MQRankSum=-3.764;QD=18.56;ReadPosRankSum=-2.689;VQSLOD=2.3593;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:26:62.39:62,0,1671	0/0:6,0:6:17.95:0,18,372	0/0:5,0:4:11.95:0,12,153	0/0:6,0:3:5.83:0,6,55	0/0:23,0:23:61.95:0,62,1539	0/0:20,0:20:54.09:0,54,2099	0/0:6,0:6:17.85:0,18,638	1/1:26,0:27:8.37:656,8,0	0/0:6,0:6:18.03:0,18,713	0/0:21,0:21:50.11:0,50,1230	0/0:11,0:11:33.04:0,33,1017	0/0:3,0:3:9:0,9,98	0/0:5,0:5:15.04:0,15,659	0/0:12,0:12:36.07:0,36,1188	1/1:7,0:7:18.05:1049,18,0	0/0:13,0:13:39.08:0,39,1084	0/1:41,0:41:99:216,0,2279	1/1:2,8:18:9.03:859,9,0	0/0:22,0:21:51.75:0,52,1222	0/0:12,0:11:27.02:0,27,801	0/0:13,0:13:39.10:0,39,1396	0/0:2,0:2:5.99:0,6,50	0/0:5,0:5:15.01:0,15,312	0/0:8,0:8:5.18:0,5,636	1/1:0,10:14:3.01:289,3,0	0/1:22,0:22:99:148,0,1310	0/1:17,0:17:99:141,0,463	0/1:25,0:24:99:310,0,749
chr10	4345056	.	TA	T	465.82	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.028;DP=412;FS=1.623;HRun=11;HaplotypeScore=65.0248;InbreedingCoeff=0.5849;MQ=61.78;MQ0=2;MQRankSum=-0.942;QD=17.92;ReadPosRankSum=-0.620;VQSLOD=4.4314;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:28:49:0,49,265	0/0:7,0:7:13.24:0,13,147	0/0:8,0:7:11.39:0,11,96	0/0:6,0:4:9:0,9,51	0/0:25,2:27:47.49:0,47,683	0/0:20,0:20:45.11:0,45,480	0/0:5,0:5:9.02:0,9,96	1/1:3,23:26:68.87:560,69,0	0/0:8,0:8:24.05:0,24,248	0/0:11,0:20:49.63:0,50,373	0/0:16,0:16:48.09:0,48,492	0/0:3,0:3:9.02:0,9,96	0/0:5,0:5:12.03:0,12,128	0/0:13,0:13:30.08:0,30,320	0/0:7,0:7:17.52:0,18,152	0/0:12,0:12:30.08:0,30,320	0/0:38,0:38:99:0,99,1048	0/0:14,0:14:12.03:0,12,128	0/0:21,1:21:23.47:0,23,447	0/0:11,2:13:8.26:0,8,270	0/0:13,0:13:27.07:0,27,288	0/0:2,0:2:6.02:0,6,64	0/0:8,0:8:24.06:0,24,256	0/0:8,0:8:17.91:0,18,175	0/0:13,0:13:3.01:0,3,32	0/0:21,1:23:23.31:0,23,437	0/0:18,0:18:45.08:0,45,467	0/0:26,0:25:66.64:0,67,705
chr10	4345497	.	AG	A	7800.98	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=15.567;DP=686;FS=0.300;HRun=4;HaplotypeScore=73.1161;InbreedingCoeff=0.9994;MQ=87.57;MQ0=0;MQRankSum=-2.593;QD=32.10;ReadPosRankSum=-0.077;VQSLOD=5.1487;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,33:35:93.29:1116,93,0	0/0:19,0:19:57.19:0,57,798	0/0:21,0:21:60.15:0,60,765	0/0:25,0:25:47.46:0,47,799	0/0:25,0:25:72.24:0,72,1008	0/0:19,0:19:48.16:0,48,672	0/0:17,0:17:48.16:0,48,672	1/1:4,39:43:99:1378,117,0	0/0:18,0:18:51.16:0,51,698	0/0:36,0:36:99:0,108,1506	0/0:25,0:25:72.24:0,72,1007	0/0:19,0:19:51.17:0,51,714	0/0:19,0:19:57.19:0,57,798	0/0:29,0:29:84.27:0,84,1158	1/1:2,22:24:21.84:679,22,0	0/0:20,0:20:60.20:0,60,840	1/1:0,26:26:75.23:900,75,0	1/1:1,15:16:39.09:453,39,0	0/0:23,0:23:63.21:0,63,877	0/0:34,0:34:93.31:0,93,1300	0/0:11,0:11:33.08:0,33,441	0/0:31,0:31:87.29:0,87,1215	0/0:32,0:32:93.31:0,93,1301	0/0:20,0:20:60.20:0,60,840	1/1:1,25:26:60.18:720,60,0	1/1:1,31:32:93.29:1116,93,0	1/1:0,29:29:84.26:1008,84,0	1/1:0,12:12:36.11:432,36,0
chr10	4346461	.	A	ACACC	2006.55	PASS	AB=0.914;AC=9;AF=0.161;AN=56;BaseQRankSum=4.773;DP=698;FS=12.598;HRun=0;HaplotypeScore=141.2584;InbreedingCoeff=0.3420;MQ=64.47;MQ0=20;MQRankSum=-5.362;QD=13.93;ReadPosRankSum=1.556;VQSLOD=2.6440;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:28:55.31:55,0,133	0/0:9,0:9:24.02:0,24,303	0/0:46,0:24:47.76:0,48,512	0/0:43,0:28:68.59:0,69,740	0/0:24,0:24:66.11:0,66,949	0/0:21,0:21:56.93:0,57,624	0/0:32,0:31:65.99:0,66,755	0/1:19,0:17:5.01:5,0,223	0/0:29,0:29:75.05:0,75,1064	0/0:23,0:23:53.64:0,54,759	0/0:16,0:15:41.95:0,42,580	0/0:25,0:24:65.30:0,65,822	0/0:15,0:15:38.13:0,38,425	0/0:22,0:22:60.04:0,60,729	0/0:23,0:22:29.20:0,29,261	0/0:16,0:16:41.99:0,42,505	0/1:20,0:18:97.29:146,0,97	0/1:15,0:17:18.96:19,0,173	0/0:23,0:19:47.83:0,48,497	0/0:26,0:26:63.04:0,63,781	0/0:59,0:56:91.53:0,92,1304	0/0:15,0:15:39.06:0,39,519	0/0:25,0:25:50.79:0,51,664	0/0:56,0:56:99:0,133,1789	0/0:6,0:6:8.97:0,9,75	0/1:12,18:30:38.62:1056,0,39	1/1:12,1:13:38.97:543,39,0	1/1:6,9:14:15.03:330,15,0
chr10	4346467	.	A	ACC	1061.01	PASS	AB=0.978;AC=7;AF=0.125;AN=56;BaseQRankSum=5.764;DP=711;FS=7.390;HRun=3;HaplotypeScore=129.5197;InbreedingCoeff=0.4991;MQ=56.19;MQ0=27;MQRankSum=-5.702;QD=9.47;ReadPosRankSum=2.810;VQSLOD=0.2343;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:35,0:33:3.44:3,0,267	0/0:9,0:9:23.93:0,24,248	0/0:41,0:17:47.70:0,48,496	0/0:41,0:24:64.73:0,65,731	0/0:26,0:26:68.92:0,69,860	0/0:23,0:23:59.56:0,60,597	0/0:30,0:29:36.97:0,37,706	0/0:21,0:18:41.29:0,41,366	0/0:29,0:29:77.78:0,78,907	0/0:24,0:24:54.52:0,55,699	0/0:17,0:16:42.67:0,43,563	0/0:27,0:26:68.04:0,68,764	0/0:14,0:14:38.90:0,39,445	0/0:21,0:21:49.41:0,49,687	0/0:24,0:23:35.93:0,36,306	0/0:15,0:15:44.91:0,45,495	0/1:23,0:21:46.56:47,0,144	0/0:17,0:17:30.09:0,30,229	0/0:24,0:20:22.29:0,22,483	0/0:25,0:25:66.02:0,66,773	0/0:64,0:56:97.82:0,98,1223	0/0:15,0:15:41.96:0,42,470	0/0:24,0:24:32.63:0,33,665	0/0:61,0:61:99:0,135,1651	0/0:7,0:6:8.92:0,9,75	0/1:27,2:28:67.79:575,0,68	1/1:11,2:13:9.43:387,9,0	1/1:11,1:11:15.04:180,15,0
chr10	4346488	.	CACGG	C	1475.08	PASS	AB=0.939;AC=10;AF=0.179;AN=56;BaseQRankSum=7.131;DP=670;FS=30.220;HRun=0;HaplotypeScore=149.8138;InbreedingCoeff=0.0281;MQ=47.79;MQ0=25;MQRankSum=-5.597;QD=7.45;ReadPosRankSum=-1.573;VQSLOD=1.1404;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:27,6:31:99:281,0,266	0/0:7,0:7:15.31:0,15,307	0/0:28,0:8:17.25:0,17,268	0/1:28,0:10:8.03:8,0,244	0/0:25,0:25:66.68:0,67,1383	0/0:18,0:18:44.15:0,44,685	0/0:28,0:27:41.80:0,42,1211	0/1:23,2:21:27.09:27,0,487	0/0:26,0:26:69.38:0,69,1426	0/0:28,0:27:48.28:0,48,1172	0/0:16,0:15:32.99:0,33,759	0/0:19,0:19:48.13:0,48,978	0/0:10,0:10:30:0,30,566	0/0:16,0:16:35.92:0,36,874	0/1:20,0:18:12.06:12,0,105	0/0:14,0:13:35.09:0,35,690	1/1:16,4:17:26.44:415,26,0	0/1:16,0:14:74.97:75,0,120	0/0:27,0:24:43.52:0,44,662	0/0:17,0:17:43.02:0,43,948	0/0:81,0:71:99:0,105,2373	0/0:19,0:19:45.12:0,45,830	0/0:23,0:23:57.17:0,57,1081	0/0:57,0:56:99:0,124,2641	0/0:13,0:11:9.84:0,10,144	0/1:27,2:28:99:451,0,348	0/1:14,2:16:99:227,0,177	0/1:10,1:10:59.38:128,0,59
chr10	4346520	.	CACGG	C	215.65	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=5.212;DP=527;FS=28.034;HRun=0;HaplotypeScore=137.0353;InbreedingCoeff=0.1464;MQ=47.30;MQ0=17;MQRankSum=-5.749;QD=2.03;ReadPosRankSum=-2.016;VQSLOD=0.8729;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,3:27:25.03:0,25,239	0/0:5,0:5:11.78:0,12,258	0/0:16,0:3:9.03:0,9,169	0/1:20,0:6:2.84:3,0,96	0/1:13,0:13:13.70:14,0,567	0/0:16,0:16:41.35:0,41,808	0/0:32,0:31:76.77:0,77,1678	0/1:27,0:24:30.68:31,0,622	0/1:17,0:17:0.55:1,0,660	0/0:21,0:21:6.01:0,6,1002	0/0:6,0:6:9.64:0,10,175	0/0:12,0:12:2.92:0,3,533	0/0:8,0:8:23.18:0,23,390	0/0:9,0:9:15.94:0,16,317	0/0:12,1:13:13.21:0,13,180	0/0:11,0:11:29.89:0,30,581	1/1:14,2:15:22.66:275,23,0	0/0:10,0:7:15.03:0,15,206	0/0:22,0:17:5.68:0,6,504	0/0:12,0:11:24.97:0,25,566	0/0:83,0:70:99:0,131,2913	0/0:20,0:20:39.34:0,39,847	0/0:14,0:14:39.13:0,39,876	0/0:49,0:47:60.93:0,61,2116	0/0:13,2:14:12.35:0,12,169	0/0:12,0:12:9.57:0,10,358	0/1:13,0:13:13.50:13,0,224	0/0:7,0:7:6.01:0,6,90
chr10	4346524	.	GAC	G	373.48	PASS	AB=0.970;AC=8;AF=0.148;AN=54;BaseQRankSum=5.396;DP=519;FS=0.000;HRun=0;HaplotypeScore=120.6298;InbreedingCoeff=0.3550;MQ=46.98;MQ0=18;MQRankSum=-3.721;QD=3.11;ReadPosRankSum=-1.600;VQSLOD=2.2730;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:19,9:27:22.75:253,23,0	0/0:4,0:4:9.03:0,9,141	0/0:15,0:3:6.02:0,6,82	0/0:20,0:6:3.01:0,3,36	0/0:11,0:11:18.06:0,18,292	0/0:16,0:16:16.14:0,16,378	0/1:30,1:30:7.82:8,0,810	0/0:23,0:21:38.78:0,39,499	0/0:19,0:18:18.06:0,18,283	0/0:20,0:20:24.04:0,24,421	0/0:6,0:6:9:0,9,114	0/0:11,0:11:18.29:0,18,308	0/0:8,0:8:15.05:0,15,212	0/0:9,0:9:15.03:0,15,173	0/1:8,0:11:2.67:3,0,46	0/0:11,0:11:21.06:0,21,308	1/1:10,5:14:20.68:195,21,0	0/0:8,0:9:0.25:0,0,31	0/0:19,0:13:9.03:0,9,204	0/0:10,0:9:18.06:0,18,273	0/0:86,0:71:99:0,105,1500	0/1:19,2:21:45.55:46,0,417	0/0:15,0:15:26.96:0,27,412	0/0:50,1:49:41.13:0,41,1128	0/0:8,0:14:8.64:0,9,60	0/0:11,0:12:20.37:0,20,169	0/1:12,0:14:0.51:1,0,61	./.
chr10	4346544	.	GAC	G	1077.79	PASS	AB=0.928;AC=26;AF=0.520;AN=50;BaseQRankSum=3.646;DP=539;FS=2.020;HRun=0;HaplotypeScore=119.8842;InbreedingCoeff=0.2028;MQ=43.68;MQ0=34;MQRankSum=-0.264;QD=2.90;ReadPosRankSum=0.527;VQSLOD=2.7000;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:31:5.82:0,6,40	1/1:5,0:5:6.02:69,6,0	./.	./.	1/1:6,5:11:2.98:35,3,0	0/1:15,1:16:21.47:21,0,207	0/1:31,2:32:5.81:6,0,449	0/1:24,1:18:13.81:14,0,106	0/1:14,2:15:11.25:11,0,217	0/0:22,0:22:34.80:0,35,365	0/0:6,0:6:9.03:0,9,138	1/1:12,4:15:18.87:156,19,0	1/1:6,2:8:14.71:147,15,0	1/1:8,5:10:15.04:173,15,0	1/1:12,0:12:2.41:13,2,0	0/0:9,0:9:12.03:0,12,157	0/1:28,0:27:19.86:26,0,20	1/1:17,0:15:7.95:27,8,0	0/0:21,0:14:15.14:0,15,255	0/0:12,0:10:12.04:0,12,187	1/1:66,9:60:42.50:432,43,0	0/1:16,2:18:20.60:21,0,243	0/0:10,1:11:8.19:0,8,115	0/1:43,5:48:53.44:53,0,541	0/0:19,0:17:0.04:0,0,7	0/1:15,0:14:18.16:18,0,61	1/1:10,0:10:6.77:23,7,0	./.
chr10	4346570	.	CACGG	C	1011.71	PASS	AB=0.989;AC=21;AF=0.375;AN=56;BaseQRankSum=6.950;DP=598;FS=7.971;HRun=0;HaplotypeScore=113.9432;InbreedingCoeff=0.1285;MQ=45.88;MQ0=36;MQRankSum=-3.030;QD=2.61;ReadPosRankSum=0.714;VQSLOD=1.6002;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:37,0:36:21.77:22,0,30	0/1:11,0:11:8.13:8,0,342	0/0:5,0:1:3.01:0,3,43	0/0:20,0:1:2.22:0,2,7	0/0:14,0:13:18.06:0,18,313	0/1:15,0:15:23.78:24,0,484	0/0:34,0:31:28.47:0,28,834	0/0:22,0:15:34.52:0,35,393	0/0:19,0:18:24.85:0,25,437	0/1:26,0:24:45.81:46,0,543	0/0:10,0:10:22.32:0,22,396	0/1:20,0:19:73.27:73,0,255	0/0:8,0:8:15.08:0,15,160	0/0:13,0:11:28.86:0,29,302	1/1:4,10:14:1.38:32,1,0	0/0:9,0:9:17.57:0,18,350	1/1:31,0:29:11.97:166,12,0	1/1:5,24:27:10.79:180,11,0	0/1:30,0:22:8.43:8,0,701	0/1:15,0:14:4.55:5,0,456	0/1:79,0:67:41.87:42,0,1017	0/1:21,0:20:4.52:5,0,532	0/0:13,0:13:6.13:0,6,357	0/0:44,0:43:65.58:0,66,1204	0/1:19,0:19:0.36:87,0,0	0/1:19,3:16:99:297,0,147	1/1:9,5:12:9.88:124,10,0	1/1:1,3:4:8.05:63,8,0
chr10	4346573	.	GGA	G	194.14	PASS	AB=1.000;AC=14;AF=0.250;AN=56;BaseQRankSum=7.792;DP=596;FS=20.500;HRun=0;HaplotypeScore=101.7218;InbreedingCoeff=-0.0391;MQ=46.06;MQ0=38;MQRankSum=-4.277;QD=0.79;ReadPosRankSum=1.035;VQSLOD=0.5599;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:36,0:35:13.64:14,0,51	0/0:11,0:11:26.09:0,26,443	0/0:5,0:1:3.01:0,3,58	0/0:23,0:2:3:0,3,25	0/0:14,0:13:26.89:0,27,439	0/1:16,0:15:5.86:6,0,408	0/0:29,5:31:20.91:0,21,789	0/0:22,0:15:1.74:0,2,310	0/0:17,0:17:20.15:0,20,399	0/1:21,0:20:8.10:8,0,469	0/0:10,0:10:24.07:0,24,420	0/1:22,0:21:1.48:1,0,500	0/1:8,0:8:27.38:27,0,115	0/1:13,0:11:13.24:13,0,295	0/0:14,0:14:0.88:0,1,2	0/0:10,0:10:6.09:0,6,329	0/1:31,0:29:52.69:123,0,53	0/1:29,0:27:38.70:39,0,40	0/1:31,0:21:0.55:1,0,643	0/0:17,0:15:22.99:0,23,506	0/0:79,0:68:48.76:0,49,1597	0/0:19,1:19:29.52:0,30,652	0/0:11,0:11:23.12:0,23,411	0/0:45,0:44:62.37:0,62,1033	0/0:19,0:19:5.21:0,5,69	0/1:21,0:15:54.28:54,0,131	1/1:13,0:11:2.13:22,2,0	1/1:4,0:4:5.97:24,6,0
chr10	4347827	.	T	TA	1403.25	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=3.583;DP=371;FS=4.645;HRun=0;HaplotypeScore=51.4187;InbreedingCoeff=0.7523;MQ=64.13;MQ0=2;MQRankSum=0.341;QD=20.34;ReadPosRankSum=1.257;VQSLOD=4.7820;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:21:30.04:0,30,311	0/0:4,0:4:12.04:0,12,168	0/0:10,0:6:15.05:0,15,207	0/1:8,0:7:2.47:2,0,158	0/0:16,0:16:48.16:0,48,667	0/0:12,0:12:36.11:0,36,485	0/0:9,0:9:27.09:0,27,376	0/0:33,0:31:83.47:0,83,588	0/0:6,0:6:18.05:0,18,234	0/0:25,0:25:75.25:0,75,1049	0/0:10,0:10:30.10:0,30,418	0/0:3,0:3:9.02:0,9,111	0/0:7,0:7:21.04:0,21,256	0/0:13,0:13:39.13:0,39,537	0/0:12,0:12:33.99:0,34,243	0/0:2,0:2:6.02:0,6,84	0/0:25,0:25:59.77:0,60,371	0/0:21,0:19:44.32:0,44,271	0/0:25,0:25:72.24:0,72,988	0/0:7,0:7:18.06:0,18,251	0/0:7,0:7:21.07:0,21,293	0/0:2,0:2:6.02:0,6,84	0/0:4,0:4:12.04:0,12,160	0/0:8,0:8:24.08:0,24,333	0/0:19,0:19:41.34:0,41,281	1/1:1,16:17:6.19:411,6,0	1/1:2,20:21:55.44:571,55,0	1/1:5,17:22:37.47:554,37,0
chr10	4347828	.	C	CT	4503.27	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=0.325;DP=372;FS=6.866;HRun=9;HaplotypeScore=41.1371;InbreedingCoeff=0.8630;MQ=63.82;MQ0=2;MQRankSum=0.678;QD=22.07;ReadPosRankSum=-0.629;VQSLOD=5.0679;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,0:22:25.70:130,26,0	0/0:4,0:4:12:0,12,104	0/0:9,0:5:5.34:0,5,29	0/1:10,0:8:1.01:13,0,1	0/0:16,0:16:35.98:0,36,313	0/0:12,0:12:35.99:0,36,312	0/0:9,0:9:20.99:0,21,182	1/1:7,26:31:75.20:828,75,0	0/0:6,0:6:11.98:0,12,104	0/0:25,0:25:74.97:0,75,649	0/0:10,0:10:23.98:0,24,205	0/0:3,0:3:9:0,9,78	0/0:6,0:6:14.99:0,15,130	0/0:13,0:13:29.99:0,30,260	1/1:2,10:12:30.08:332,30,0	0/0:2,0:2:6:0,6,52	1/1:4,22:25:37.16:637,37,0	1/1:1,19:18:45.12:498,45,0	0/0:25,0:25:50.95:0,51,443	0/0:7,0:7:18:0,18,156	0/0:7,0:7:14.98:0,15,127	0/0:2,0:2:3:0,3,26	0/0:4,0:4:9:0,9,78	0/0:8,0:8:14.97:0,15,125	1/1:1,18:19:39.11:431,39,0	1/1:16,0:16:19.05:420,19,0	1/1:22,0:21:57.15:629,57,0	1/1:22,0:22:42.18:585,42,0
chr10	4348176	.	GA	G	1536.94	PASS	AB=0.873;AC=24;AF=0.429;AN=56;BaseQRankSum=7.809;DP=507;FS=0.415;HRun=14;HaplotypeScore=62.2087;InbreedingCoeff=0.3755;MQ=69.42;MQ0=4;MQRankSum=1.384;QD=5.23;ReadPosRankSum=2.814;VQSLOD=1.9932;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,1:34:43.12:0,43,642	0/0:6,0:6:18.02:0,18,167	0/0:12,0:8:8.09:0,8,44	0/1:18,1:14:2.34:2,0,42	0/1:14,2:17:20.99:21,0,127	0/1:18,3:21:12.46:12,0,312	0/0:17,1:18:27.42:0,27,381	1/1:9,17:26:25.58:319,26,0	0/1:17,2:19:2.17:2,0,250	0/0:20,0:20:43.86:0,44,395	0/0:15,0:15:30:0,30,267	0/1:9,3:12:34.71:35,0,140	0/0:17,1:18:5.21:0,5,165	0/0:19,0:20:17.62:0,18,316	1/1:12,16:28:32.56:226,33,0	0/0:11,1:13:2.60:0,3,193	1/1:4,16:21:43.68:294,44,0	1/1:3,8:11:17.84:123,18,0	0/0:25,0:29:55.13:0,55,537	0/0:13,0:14:26.80:0,27,219	0/1:17,4:21:22.73:23,0,231	0/0:14,0:14:33.04:0,33,305	0/1:10,2:12:14.14:14,0,168	0/1:24,3:28:5.87:6,0,367	1/1:2,6:8:17.85:123,18,0	1/1:6,8:17:1.16:129,1,0	1/1:7,13:21:34.68:232,35,0	1/1:3,9:13:3.96:163,4,0
chr10	4349033	.	G	GGGT	2152.56	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=10.253;DP=615;FS=23.882;HRun=0;HaplotypeScore=109.6681;InbreedingCoeff=0.4279;MQ=92.24;MQ0=1;MQRankSum=-5.129;QD=17.36;ReadPosRankSum=-1.598;VQSLOD=1.6052;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,36:42:90.15:1883,90,0	0/0:15,0:15:45.14:0,45,728	0/0:29,0:29:81.20:0,81,1181	0/0:24,0:24:63.07:0,63,941	0/0:18,0:18:45.14:0,45,738	0/0:19,0:19:57.18:0,57,942	0/0:26,0:26:75.24:0,75,1230	0/0:20,0:20:3.76:0,4,198	0/0:31,0:31:93.32:0,93,1578	0/0:26,0:26:69.23:0,69,1150	0/0:16,0:16:45.12:0,45,714	0/0:22,0:22:57.12:0,57,887	0/0:11,0:11:33.10:0,33,532	0/0:32,0:32:93.31:0,93,1559	0/1:17,0:17:32:32,0,33	0/0:25,0:25:75.23:0,75,1203	0/1:15,0:15:6.31:6,0,33	0/1:17,0:16:30.38:47,0,30	0/0:22,0:22:57.16:0,57,887	0/0:18,0:18:45.13:0,45,716	0/0:59,0:59:99:0,172,2777	0/0:21,0:21:63.19:0,63,1002	0/0:15,0:15:45.12:0,45,710	0/0:34,0:34:99:0,99,1605	0/0:8,0:8:9:0,9,80	0/1:16,0:16:7.72:105,0,8	1/1:14,0:14:29.40:214,29,0	0/1:3,0:3:0.97:15,0,1
chr10	4349451	.	GAA	G	3842.81	PASS	AB=0.565;AC=17;AF=0.304;AN=56;BaseQRankSum=6.000;DP=535;FS=2.789;HRun=13;HaplotypeScore=73.8478;InbreedingCoeff=0.9283;MQ=69.46;MQ0=3;MQRankSum=-0.375;QD=18.39;ReadPosRankSum=5.415;VQSLOD=3.1164;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,31:33:52.90:606,53,0	0/0:9,0:9:24.08:0,24,347	0/0:12,0:10:14.38:0,14,158	0/0:21,0:21:14.64:0,15,176	0/0:13,0:13:29.97:0,30,329	0/0:12,0:12:36.09:0,36,455	0/0:17,0:17:45.12:0,45,597	1/1:5,19:25:56.74:529,57,0	0/0:22,0:22:48.05:0,48,598	0/0:27,0:28:60.84:0,61,738	0/0:15,0:16:27.09:0,27,372	0/0:23,0:23:57.12:0,57,696	0/0:12,0:16:35.53:0,36,411	0/0:11,0:13:33.06:0,33,428	1/1:9,24:32:17.08:499,17,0	0/0:13,0:13:33.04:0,33,418	1/1:2,25:28:50.91:525,51,0	1/1:3,13:16:39.06:378,39,0	0/0:14,0:14:30.06:0,30,350	0/0:10,0:14:32.34:0,32,343	0/0:24,0:27:65.64:0,66,828	0/0:19,0:19:33.49:0,33,400	0/0:9,0:9:18.03:0,18,232	0/0:23,0:27:68.38:0,68,905	0/1:3,8:12:2.32:212,0,2	1/1:7,26:34:46.41:653,46,0	1/1:4,12:16:31.25:304,31,0	1/1:5,5:10:8.95:136,9,0
chr10	4354473	.	CAAATACA	C	3907.22	PASS	AB=0.545;AC=17;AF=0.304;AN=56;BaseQRankSum=10.878;DP=370;FS=102.006;HRun=0;HaplotypeScore=89.1418;InbreedingCoeff=0.8450;MQ=78.85;MQ0=0;MQRankSum=-10.838;QD=41.13;ReadPosRankSum=2.579;VQSLOD=-0.2920;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,8:13:15.05:336,15,0	0/0:6,0:6:15.05:0,15,550	0/0:12,0:12:33.11:0,33,1262	0/0:16,0:16:36.12:0,36,1291	0/0:14,0:14:39.13:0,39,1492	0/0:13,0:13:30.10:0,30,1162	0/0:12,0:12:27.09:0,27,1018	1/1:9,8:17:24.08:570,24,0	0/0:20,0:19:33.11:0,33,1215	0/0:16,0:16:45.15:0,45,1743	0/0:14,0:14:36.12:0,36,1340	0/0:19,0:19:39.13:0,39,1510	0/0:15,0:15:32.74:0,33,1182	0/0:16,0:16:45.15:0,45,1743	1/1:3,6:9:12.04:297,12,0	0/0:21,0:21:48.16:0,48,1741	1/1:0,3:3:6.02:149,6,0	1/1:3,2:5:3.01:74,3,0	0/0:20,0:20:45.15:0,45,1642	0/0:14,0:14:36.11:0,36,1306	0/0:16,0:16:39.13:0,39,1512	0/0:14,0:14:39.13:0,39,1510	0/0:4,0:4:12.04:0,12,464	0/0:13,0:12:33.11:0,33,1231	1/1:2,11:13:30.10:743,30,0	0/1:3,15:18:33.78:995,0,34	1/1:0,9:9:12.04:297,12,0	1/1:2,6:8:18.06:446,18,0
chr10	4354651	.	CTTTT	C	3858.49	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=4.098;DP=455;FS=13.852;HRun=16;HaplotypeScore=90.6191;InbreedingCoeff=0.9539;MQ=65.98;MQ0=7;MQRankSum=-2.467;QD=20.63;ReadPosRankSum=5.719;VQSLOD=0.8964;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:17,23:42:81.57:962,82,0	0/0:6,0:6:18.02:0,18,318	0/0:21,0:11:17.60:0,18,136	0/0:16,0:9:9.54:0,10,67	0/0:12,0:12:30.06:0,30,457	0/0:5,0:6:11.70:0,12,142	0/0:14,0:16:35.90:0,36,576	1/1:9,24:30:59.21:655,59,0	0/0:23,0:23:57.09:0,57,942	0/0:12,0:10:24.04:0,24,305	0/0:13,0:14:32.37:0,32,519	0/0:13,0:13:33.02:0,33,540	0/0:9,0:9:17.97:0,18,254	0/0:12,0:14:35.83:0,36,498	1/1:5,15:20:29.99:378,30,0	0/0:8,0:9:27.01:0,27,469	1/1:3,18:21:36.05:467,36,0	1/1:7,6:13:21.35:277,21,0	0/0:19,0:19:41.98:0,42,674	0/0:17,0:18:37.60:0,38,616	0/0:17,0:17:33.10:0,33,608	0/0:10,0:10:22.70:0,23,282	0/0:9,0:10:24.01:0,24,391	0/0:15,0:15:20.72:0,21,319	1/1:3,6:7:8.95:98,9,0	1/1:9,18:27:50.84:567,51,0	1/1:8,7:16:34.10:378,34,0	1/1:2,1:3:6:79,6,0
chr10	4355093	.	CA	C	1491.82	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=7.951;DP=629;FS=2.593;HRun=5;HaplotypeScore=71.6139;InbreedingCoeff=0.9987;MQ=77.00;MQ0=0;MQRankSum=-1.837;QD=27.12;ReadPosRankSum=1.596;VQSLOD=3.6400;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:56:99:0,159,2056	0/0:10,0:10:27.09:0,27,369	0/0:30,0:28:75.02:0,75,1003	0/0:32,0:30:72.06:0,72,938	0/0:19,0:19:51.17:0,51,697	0/0:13,0:13:36.10:0,36,461	0/0:25,0:25:75.21:0,75,1004	0/0:30,0:30:87.28:0,87,1163	0/0:22,0:22:63.21:0,63,861	0/0:20,0:20:54.18:0,54,739	0/0:17,0:17:48.15:0,48,641	0/0:18,0:18:51.17:0,51,697	0/0:21,0:21:57.18:0,57,764	0/0:16,0:16:48.16:0,48,654	0/0:25,0:25:75.24:0,75,1010	0/0:25,0:25:72.23:0,72,971	0/0:25,0:25:69.17:0,69,876	0/0:16,0:16:45.15:0,45,616	0/0:15,0:15:36.12:0,36,489	0/0:23,0:23:66.18:0,66,881	0/0:48,0:48:99:0,126,1720	0/0:25,0:25:69.21:0,69,912	0/0:14,0:14:42.14:0,42,574	0/0:16,0:16:48.16:0,48,657	0/0:13,0:13:39.13:0,39,532	1/1:3,29:32:87.19:954,87,0	1/1:1,13:14:36.10:408,36,0	1/1:0,9:9:24.07:272,24,0
chr10	4355925	.	TA	T	2687.93	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=13.256;DP=391;FS=3.720;HRun=7;HaplotypeScore=54.7890;InbreedingCoeff=0.8979;MQ=68.96;MQ0=0;MQRankSum=-7.715;QD=15.72;ReadPosRankSum=0.450;VQSLOD=3.3977;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,15:18:39.02:385,39,0	0/0:7,0:7:21.07:0,21,264	0/0:14,0:11:15.26:0,15,285	0/1:12,0:8:6.94:7,0,75	0/0:19,0:19:54.17:0,54,678	0/0:16,0:16:48.15:0,48,604	0/0:12,0:12:33.11:0,33,415	1/1:29,0:29:53.28:322,53,0	0/0:13,0:13:36.08:0,36,425	0/0:14,0:14:42.13:0,42,528	0/0:15,0:15:39.12:0,39,490	0/0:19,0:19:45.13:0,45,552	0/0:4,0:4:12.04:0,12,151	0/0:12,0:12:36.11:0,36,452	1/1:23,0:23:48.37:211,48,0	0/0:11,0:11:33.11:0,33,415	1/1:1,14:15:36.08:367,36,0	1/1:5,0:5:5.35:22,5,0	0/0:29,0:29:78.25:0,78,981	0/0:12,0:12:30.08:0,30,364	0/0:6,0:6:15.05:0,15,189	0/0:4,0:4:12.04:0,12,151	0/0:7,0:7:21.07:0,21,263	0/0:6,0:6:18.06:0,18,226	1/1:16,0:16:21.43:86,21,0	1/1:1,20:21:60.13:612,60,0	1/1:1,13:14:39.09:398,39,0	1/1:2,16:18:48.11:489,48,0
chr10	4355931	.	AATAAAAG	A	3707.01	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=5.262;DP=393;FS=0.000;HRun=0;HaplotypeScore=99.3592;InbreedingCoeff=0.9393;MQ=73.37;MQ0=0;MQRankSum=-7.646;QD=57.03;ReadPosRankSum=-2.344;VQSLOD=2.5845;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:51.18:0,51,1293	0/0:7,0:7:21.07:0,21,867	0/0:15,0:12:21.28:0,21,853	0/0:15,0:11:24:0,24,418	0/0:20,0:20:60.20:0,60,2192	0/0:17,0:17:51.17:0,51,1910	0/0:11,0:11:33.11:0,33,1238	1/1:0,24:24:72.19:1467,72,0	0/0:15,0:15:45.15:0,45,1673	0/0:17,0:17:51.18:0,51,1970	0/0:17,0:17:51.17:0,51,1855	0/0:17,0:17:48.15:0,48,1786	0/0:4,0:4:12.04:0,12,493	0/0:13,0:13:39.13:0,39,1537	1/1:0,20:20:54.19:1435,54,0	0/0:11,0:11:33.11:0,33,1357	0/0:15,0:15:39.13:0,39,946	1/1:0,5:5:6.02:161,6,0	0/0:30,0:30:90.31:0,90,3179	0/0:11,0:11:30.09:0,30,1053	0/0:5,0:5:15.05:0,15,583	0/0:6,0:6:18.06:0,18,650	0/0:7,0:7:21.07:0,21,752	0/0:6,0:6:18.06:0,18,656	1/1:0,16:16:24.08:644,24,0	0/0:20,0:20:29.86:0,30,1384	0/0:14,0:14:11.75:0,12,958	0/0:16,0:16:48.16:0,48,1193
chr10	4356675	.	ATTG	A	2673.29	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=7.945;DP=607;FS=1.638;HRun=0;HaplotypeScore=99.7558;InbreedingCoeff=0.9880;MQ=57.12;MQ0=19;MQRankSum=-2.744;QD=33.42;ReadPosRankSum=-0.146;VQSLOD=4.0858;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:56:99:0,159,3375	0/0:11,0:10:27.09:0,27,595	0/0:30,0:16:42.12:0,42,859	0/0:30,0:19:39.04:0,39,664	0/0:13,0:13:27.09:0,27,596	0/0:21,0:21:60.21:0,60,1304	0/0:14,0:14:33.11:0,33,697	1/1:0,32:25:60.08:852,60,0	0/0:27,0:27:75.26:0,75,1613	0/0:16,0:15:45.15:0,45,947	0/0:9,0:9:27.09:0,27,590	0/0:14,0:14:39.12:0,39,818	0/0:24,0:24:69.24:0,69,1479	0/0:22,0:22:54.19:0,54,1157	1/1:2,26:28:78.20:1209,78,0	0/0:26,0:26:72.23:0,72,1545	0/0:35,0:35:99:0,99,1995	1/1:2,13:15:36.12:578,36,0	0/0:26,0:20:54.14:0,54,1066	0/0:11,0:11:33.11:0,33,728	0/0:41,0:41:99:0,117,2409	0/0:16,0:16:45.15:0,45,943	0/0:19,0:19:57.18:0,57,1188	0/0:21,0:21:60.21:0,60,1288	1/1:1,4:5:12.04:193,12,0	0/0:19,0:19:54.18:0,54,1115	0/0:20,0:20:54.16:0,54,1148	0/0:6,0:6:17.95:0,18,303
chr10	4358460	.	AT	A	4478.76	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=15.913;DP=532;FS=0.355;HRun=8;HaplotypeScore=58.6089;InbreedingCoeff=0.9810;MQ=57.24;MQ0=2;MQRankSum=1.229;QD=23.45;ReadPosRankSum=-0.156;VQSLOD=5.2249;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,17:21:48.07:463,48,0	0/0:5,0:5:15.05:0,15,181	0/0:11,0:8:24.07:0,24,280	0/0:8,0:5:15.04:0,15,175	0/0:25,0:25:63.19:0,63,761	0/0:26,0:26:66.20:0,66,797	0/0:14,0:13:27.08:0,27,326	1/1:2,22:20:57.02:531,57,0	0/0:14,1:15:7.18:0,7,370	0/0:24,0:24:69.21:0,69,833	0/0:20,0:20:54.15:0,54,633	0/0:16,0:16:48.15:0,48,580	0/0:17,0:17:48.13:0,48,558	0/0:20,0:20:54.16:0,54,642	1/1:2,14:16:36.05:348,36,0	0/0:17,0:17:45.14:0,45,544	1/1:2,11:12:27.04:261,27,0	1/1:2,15:17:42.06:405,42,0	0/0:18,0:18:45.13:0,45,534	0/0:36,0:36:99:0,102,1222	0/0:9,0:9:24.07:0,24,290	0/0:18,0:18:51.15:0,51,606	0/0:26,0:26:69.20:0,69,823	0/0:16,0:15:42.13:0,42,507	1/1:2,24:26:69.11:666,69,0	1/1:2,27:29:78.09:745,78,0	1/1:1,28:29:72.04:683,72,0	1/1:3,13:15:39.06:377,39,0
chr10	4358598	.	TTATAC	T	3680.55	PASS	AB=0.514;AC=5;AF=0.089;AN=56;BaseQRankSum=10.365;DP=570;FS=1.666;HRun=0;HaplotypeScore=108.2986;InbreedingCoeff=0.7792;MQ=61.29;MQ0=2;MQRankSum=-2.359;QD=53.34;ReadPosRankSum=1.542;VQSLOD=4.1520;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:90.30:0,90,2537	0/0:9,0:9:24.08:0,24,699	0/0:17,0:12:30.09:0,30,720	0/0:18,0:16:39.13:0,39,1085	0/0:18,0:18:51.17:0,51,1462	0/0:28,0:28:75.24:0,75,2190	0/0:15,0:15:39.12:0,39,1037	0/0:35,0:35:93.31:0,93,2725	0/0:19,0:19:48.16:0,48,1447	0/0:33,0:33:93.32:0,93,2828	0/0:19,0:19:54.19:0,54,1674	0/0:17,0:17:51.18:0,51,1539	0/0:19,0:19:54.19:0,54,1525	0/0:16,0:16:42.14:0,42,1297	0/0:14,0:14:39.13:0,39,1169	0/0:14,0:14:42.13:0,42,1210	0/0:28,0:28:66.23:0,66,1956	0/0:14,0:14:30.10:0,30,929	0/0:16,0:14:36.12:0,36,1078	0/0:25,0:25:60.21:0,60,1797	0/0:15,0:15:45.15:0,45,1392	0/0:22,0:22:66.23:0,66,2043	0/0:20,0:20:54.19:0,54,1605	0/0:15,0:15:39.13:0,39,1200	0/0:24,0:24:69.24:0,69,2092	0/1:1,17:18:38.88:942,0,39	1/1:4,25:27:69.07:1447,69,0	1/1:1,21:22:63.22:1292,63,0
chr10	4360021	.	T	TAAC	12745.16	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-17.002;DP=695;FS=1.763;HRun=0;HaplotypeScore=87.7256;InbreedingCoeff=0.9992;MQ=82.43;MQ0=0;MQRankSum=-4.446;QD=56.15;ReadPosRankSum=0.681;VQSLOD=6.3859;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,29:32:78.27:1711,78,0	0/0:11,0:11:33.11:0,33,534	0/0:16,0:17:38.01:0,38,583	0/0:26,0:26:66.19:0,66,1020	0/0:35,0:35:93.32:0,93,1519	0/0:30,0:30:84.23:0,84,1297	0/0:17,0:17:51.17:0,51,833	1/1:7,39:49:99:2695,129,0	0/0:23,0:23:66.21:0,66,1054	0/0:27,0:27:78.27:0,78,1274	0/0:29,0:29:87.27:0,87,1368	0/0:33,0:33:99:0,99,1567	0/0:15,0:15:45.15:0,45,735	0/0:19,0:19:57.19:0,57,929	1/1:0,27:28:78.27:1741,78,0	0/0:27,0:27:78.27:0,78,1274	1/1:2,23:26:63.16:1406,63,0	1/1:1,7:8:21.07:469,21,0	0/0:32,0:32:84.27:0,84,1324	0/0:35,0:35:99:0,102,1664	0/0:14,0:14:42.13:0,42,662	0/0:26,0:26:69.20:0,69,1072	0/0:28,0:28:78.27:0,78,1272	0/0:24,0:24:72.22:0,72,1128	1/1:0,13:13:33.11:737,33,0	1/1:2,24:26:75.26:1643,75,0	1/1:2,27:30:72.25:1607,72,0	1/1:0,14:15:33.11:737,33,0
chr10	4360761	.	TTCATTTGTAAAAAAAACAAA	T	13447.97	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=14.415;DP=559;FS=17.807;HRun=0;HaplotypeScore=284.5771;InbreedingCoeff=0.9846;MQ=74.39;MQ0=3;MQRankSum=-12.684;QD=96.06;ReadPosRankSum=3.102;VQSLOD=3.4105;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,13:21:50.97:2221,51,0	0/0:15,0:15:45.15:0,45,3656	0/0:24,0:20:60.04:0,60,3154	0/0:31,0:22:57.47:0,57,2050	0/0:29,0:29:87.30:0,87,7169	0/0:24,0:24:72.24:0,72,5998	0/0:30,0:30:90.27:0,90,5731	1/1:0,17:17:50.75:877,51,0	0/0:19,0:19:57.18:0,57,3894	0/0:32,0:32:96.33:0,96,7978	0/0:27,0:27:81.27:0,81,6159	0/0:7,0:7:21.06:0,21,1570	0/0:24,0:24:72.25:0,72,5438	0/0:9,0:9:27.06:0,27,1892	1/1:0,14:14:27.09:1539,27,0	0/0:25,0:25:75.26:0,75,6361	1/1:0,21:21:30.10:1711,30,0	1/1:0,11:11:12.04:698,12,0	0/0:18,0:18:54.19:0,54,4142	0/0:29,0:29:87.29:0,87,6833	0/0:24,0:24:72.22:0,72,5039	0/0:18,0:18:51.18:0,51,4065	0/0:23,0:23:69.24:0,69,5631	0/0:11,0:11:33.11:0,33,2814	1/1:0,14:14:24.08:1395,24,0	1/1:0,18:18:50.98:2092,51,0	1/1:1,18:19:45.15:2609,45,0	1/1:2,3:5:9.03:306,9,0
chr10	4360764	.	ATTTGT	A	2878.84	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=13.754;DP=554;FS=15.026;HRun=0;HaplotypeScore=157.7143;InbreedingCoeff=0.9743;MQ=73.75;MQ0=3;MQRankSum=-12.838;QD=21.48;ReadPosRankSum=5.576;VQSLOD=2.4655;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:13,2:15:39.09:576,39,0	0/0:15,0:15:45.15:0,45,1422	0/0:26,0:21:60.06:0,60,1497	0/0:32,0:23:56.16:0,56,1334	0/0:29,0:29:87.30:0,87,2715	0/0:24,0:24:72.25:0,72,2229	0/0:27,0:27:81.26:0,81,2398	1/1:17,0:17:9.03:137,9,0	0/0:18,0:18:54.17:0,54,1599	0/0:32,0:32:96.33:0,96,2987	0/0:27,0:27:81.28:0,81,2515	0/0:6,0:6:18.06:0,18,570	0/0:24,0:24:72.25:0,72,2241	0/0:8,0:8:21.07:0,21,665	1/1:14,0:14:27.08:357,27,0	0/0:25,0:25:75.26:0,75,2353	1/1:21,0:21:30.10:419,30,0	1/1:11,0:11:12.04:148,12,0	0/0:19,0:19:57.18:0,57,1671	0/0:30,0:30:90.31:0,90,2741	0/0:22,0:22:66.21:0,66,1971	0/0:18,0:18:51.18:0,51,1620	0/0:25,0:25:75.26:0,75,2335	0/0:11,0:11:33.11:0,33,1033	1/1:14,0:14:24.07:288,24,0	1/1:18,0:18:36.11:464,36,0	1/1:19,0:19:45.14:555,45,0	1/1:3,2:5:9.03:146,9,0
chr10	4360817	.	A	AC	638.19	PASS	AB=1.000;AC=4;AF=0.071;AN=56;BaseQRankSum=3.036;DP=510;FS=0.000;HRun=4;HaplotypeScore=90.6303;InbreedingCoeff=0.5022;MQ=73.48;MQ0=2;MQRankSum=-1.561;QD=7.98;ReadPosRankSum=-1.034;VQSLOD=-0.0075;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,22:24:54.18:728,54,0	0/0:10,0:10:30.09:0,30,339	0/1:32,0:18:4.65:5,0,260	0/1:24,0:15:13.10:13,0,204	0/0:22,0:22:50.46:0,50,664	0/0:25,0:25:75.09:0,75,802	0/0:18,0:18:48.04:0,48,482	0/0:24,0:24:60.15:0,60,669	0/0:13,0:13:33.09:0,33,372	0/0:22,0:22:57.15:0,57,632	0/0:16,0:16:48.13:0,48,531	0/0:6,0:6:18.04:0,18,196	0/0:16,0:16:48.12:0,48,532	0/0:8,0:8:21.04:0,21,228	0/0:20,0:20:54.14:0,54,594	0/0:18,0:18:51.15:0,51,576	0/0:22,0:22:60.16:0,60,665	0/0:13,0:13:30.09:0,30,339	0/0:30,0:30:81:0,81,851	0/0:21,0:21:60.15:0,60,662	0/0:19,0:19:45.11:0,45,500	0/0:12,0:12:35.92:0,36,366	0/0:13,0:13:39.09:0,39,428	0/0:12,0:12:24.06:0,24,271	0/0:22,0:22:45.12:0,45,498	0/0:17,0:17:45.06:0,45,488	0/0:23,0:23:53.87:0,54,579	0/0:8,0:8:21.06:0,21,236
chr10	4362582	.	AT	A	5217.41	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=9.562;DP=519;FS=1.607;HRun=3;HaplotypeScore=54.5317;InbreedingCoeff=0.9977;MQ=86.13;MQ0=1;MQRankSum=-5.672;QD=32.81;ReadPosRankSum=2.802;VQSLOD=5.0569;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,38:39:99:1301,105,0	0/0:8,0:8:24.08:0,24,346	0/0:18,0:18:54.12:0,54,725	0/0:17,0:17:36.41:0,36,592	0/0:16,0:16:48.15:0,48,673	0/0:17,0:17:51.16:0,51,718	0/0:22,0:22:66.16:0,66,892	0/0:24,0:24:66.20:0,66,902	0/0:20,0:20:60.19:0,60,846	0/0:23,0:23:69.22:0,69,959	0/0:13,0:13:36.11:0,36,502	0/0:23,0:23:69.22:0,69,976	0/0:19,0:19:57.17:0,57,801	0/0:17,0:17:48.16:0,48,691	1/1:0,19:19:48.15:595,48,0	0/0:15,0:15:45.15:0,45,648	1/1:1,19:20:54.17:667,54,0	1/1:1,27:28:78.24:963,78,0	0/0:17,0:17:48.12:0,48,623	0/0:10,0:10:27.07:0,27,353	0/0:26,0:25:75.25:0,75,1079	0/0:17,0:17:48.16:0,48,691	0/0:14,0:14:39.13:0,39,557	0/0:24,0:24:69.22:0,69,975	1/1:0,9:9:18.06:223,18,0	1/1:0,22:22:60.15:726,60,0	1/1:0,12:12:36.11:445,36,0	1/1:1,9:10:24.07:297,24,0
chr10	4362728	.	ACGTGTGTGTGTGTGTGTG	A	1699.29	PASS	AB=0.987;AC=11;AF=0.196;AN=56;BaseQRankSum=8.905;DP=532;FS=35.763;HRun=0;HaplotypeScore=213.6305;InbreedingCoeff=0.3533;MQ=67.68;MQ0=18;MQRankSum=0.726;QD=12.78;ReadPosRankSum=-1.724;VQSLOD=1.3823;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:24:99:148,0,816	0/0:3,0:3:8.97:0,9,173	0/0:47,0:22:49.55:0,50,466	0/0:55,0:28:57.75:0,58,567	0/0:8,0:8:17.91:0,18,243	0/0:15,0:15:38.98:0,39,967	0/0:25,0:24:56.65:0,57,1129	0/0:32,0:31:86.19:0,86,682	0/0:15,0:15:44.74:0,45,791	0/0:14,0:14:42.10:0,42,1156	0/0:15,0:15:38.94:0,39,796	0/0:17,0:17:35.74:0,36,814	0/0:17,0:17:43.93:0,44,1195	0/0:14,0:13:35.60:0,36,592	0/1:14,0:14:99:158,0,156	0/0:18,0:18:32.97:0,33,888	0/1:24,0:21:99:142,0,502	0/1:10,0:10:61.92:97,0,62	0/0:21,0:21:62.62:0,63,670	0/0:9,0:9:23.72:0,24,419	0/0:31,0:29:62.12:0,62,1505	0/0:18,0:18:50.83:0,51,1252	0/0:9,0:9:21.79:0,22,367	0/0:16,0:16:31.76:0,32,566	0/1:13,0:14:46.86:47,0,282	1/1:0,21:21:55.75:648,56,0	1/1:0,16:17:8.72:457,9,0	1/1:1,7:7:3.01:158,3,0
chr10	4362729	.	CGTGT	C	491.11	PASS	AB=0.936;AC=22;AF=0.611;AN=36;BaseQRankSum=0.887;DP=546;FS=14.449;HRun=0;HaplotypeScore=103.6088;InbreedingCoeff=0.2715;MQ=65.74;MQ0=20;MQRankSum=-1.458;QD=2.27;ReadPosRankSum=1.584;VQSLOD=0.8505;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:26:15:0,15,179	./.	./.	./.	0/0:7,0:8:0:0,0,0	0/0:13,2:15:2.99:0,3,23	1/1:19,4:22:6.42:65,6,0	./.	./.	1/1:13,0:14:2.99:24,3,0	1/1:14,2:16:2.84:46,3,0	0/1:16,2:18:36.06:40,0,36	1/1:12,3:17:2.43:136,2,0	./.	1/1:13,0:13:2.50:9,2,0	1/1:14,4:18:3:46,3,0	0/0:30,0:27:9.18:0,9,97	0/0:12,0:12:6.90:0,7,80	0/0:22,0:22:0:0,0,0	./.	0/1:33,1:32:74:77,0,74	./.	./.	1/1:13,0:16:3:28,3,0	./.	1/1:21,0:21:3:28,3,0	1/1:17,0:17:8.90:84,9,0	1/1:9,0:7:3:28,3,0
chr10	4363561	.	T	TATACACACACACACAC	7124.71	PASS	AB=0.848;AC=14;AF=0.250;AN=56;BaseQRankSum=5.254;DP=619;FS=15.932;HRun=0;HaplotypeScore=248.1442;InbreedingCoeff=0.6129;MQ=56.20;MQ0=4;MQRankSum=-8.683;QD=36.17;ReadPosRankSum=-2.104;VQSLOD=1.8837;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:34,0:32:50.88:827,51,0	0/0:5,0:6:18.03:0,18,490	0/0:24,0:17:43.51:0,44,577	0/0:23,0:19:39.47:0,39,395	0/0:19,0:20:48.06:0,48,1305	0/0:21,0:25:69.08:0,69,1878	0/0:25,0:27:81.08:0,81,2436	0/1:26,0:25:99:828,0,284	0/0:29,0:29:69.02:0,69,1815	0/0:22,0:22:57.25:0,57,1170	0/0:16,0:21:57.12:0,57,1942	0/0:18,0:18:47.70:0,48,1265	0/0:26,0:26:64.97:0,65,1767	0/0:14,0:14:38.98:0,39,1019	0/1:11,0:21:99:550,0,115	0/0:18,0:19:57.11:0,57,1659	1/1:9,0:20:23.11:1274,23,0	0/1:15,0:15:99:233,0,172	0/0:19,0:19:56.62:0,57,1006	0/0:11,0:12:33.07:0,33,1005	0/0:27,0:26:69.55:0,70,1873	0/0:26,0:26:78.10:0,78,2076	0/0:26,0:26:72.01:0,72,1445	0/0:38,0:38:90.50:0,90,2181	0/1:15,0:24:99:263,0,118	1/1:19,0:18:48.05:1745,48,0	1/1:6,16:29:15.05:1006,15,0	1/1:8,0:8:21:397,21,0
chr10	4365705	.	TGTTAGA	T	1240.44	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.248;DP=657;FS=1.809;HRun=0;HaplotypeScore=135.2388;InbreedingCoeff=0.9991;MQ=82.94;MQ0=0;MQRankSum=-2.955;QD=49.62;ReadPosRankSum=-3.723;VQSLOD=2.8754;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:72.25:0,72,2511	0/0:11,0:11:33.11:0,33,1103	0/0:26,0:26:77.46:0,77,2495	0/0:17,0:17:48.16:0,48,1576	0/0:27,0:27:72.25:0,72,2467	0/0:39,0:39:99:0,108,3816	0/0:15,0:15:42.13:0,42,1402	1/1:4,21:25:63.19:1335,63,0	0/0:15,0:15:45.15:0,45,1556	0/0:32,0:32:90.30:0,90,3054	0/0:12,0:12:30.10:0,30,1056	0/0:23,0:23:66.23:0,66,2303	0/0:21,0:21:63.22:0,63,2146	0/0:16,0:16:48.16:0,48,1609	0/0:31,0:31:90.31:0,90,3058	0/0:32,0:32:93.32:0,93,3286	0/0:28,0:28:78.27:0,78,2756	0/0:25,0:25:69.24:0,69,2371	0/0:27,0:27:75.26:0,75,2549	0/0:28,0:28:78.27:0,78,2628	0/0:15,0:15:42.13:0,42,1345	0/0:22,0:22:66.23:0,66,2277	0/0:14,0:14:39.13:0,39,1350	0/0:29,0:29:87.30:0,87,3074	0/0:22,0:22:63.22:0,63,2170	0/0:35,0:35:87.30:0,87,3076	0/0:32,0:32:93.32:0,93,3277	0/0:14,0:14:42.14:0,42,1311
chr10	4366070	.	GCCC	G	392.44	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.459;DP=835;FS=5.505;HRun=3;HaplotypeScore=124.7085;InbreedingCoeff=0.9999;MQ=80.89;MQ0=0;MQRankSum=-5.725;QD=24.53;ReadPosRankSum=-1.769;VQSLOD=0.2571;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,160,3886	0/0:15,0:15:45.12:0,45,1059	0/0:30,0:30:82.96:0,83,1848	0/0:26,0:26:78.21:0,78,1797	0/0:22,0:22:66.23:0,66,1607	0/0:17,0:17:51.18:0,51,1257	0/0:35,0:35:99:0,105,2543	1/1:1,15:16:42.59:487,43,0	0/0:37,0:37:99:0,111,2733	0/0:47,0:47:99:0,141,3485	0/0:19,0:19:57.20:0,57,1405	0/0:40,0:40:99:0,120,2959	0/0:21,0:21:63.22:0,63,1553	0/0:32,0:32:96.33:0,96,2338	0/0:35,0:35:99:0,105,2564	0/0:36,0:36:99:0,108,2645	0/0:35,0:35:99:0,105,2588	0/0:30,0:30:90.31:0,90,2203	0/0:31,0:31:93.32:0,93,2286	0/0:30,0:30:90.31:0,90,2219	0/0:49,0:49:99:0,148,3616	0/0:32,0:32:96.33:0,96,2366	0/0:26,0:26:78.25:0,78,1872	0/0:31,0:31:93.32:0,93,2269	0/0:20,0:20:60.21:0,60,1456	0/0:29,0:29:87.29:0,87,2096	0/0:28,0:28:84.29:0,84,2059	0/0:13,0:13:39.13:0,39,961
chr10	4366074	.	TGAAGAGC	T	782.37	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.613;DP=846;FS=3.605;HRun=0;HaplotypeScore=197.0964;InbreedingCoeff=0.9988;MQ=81.58;MQ0=0;MQRankSum=-5.677;QD=52.16;ReadPosRankSum=-1.508;VQSLOD=3.3089;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,160,6545	0/0:14,0:14:42.14:0,42,1744	0/0:29,0:30:88.54:0,89,3299	0/0:26,0:26:26.88:0,27,2875	0/0:23,0:23:69.20:0,69,2696	0/0:20,0:20:60.21:0,60,2425	0/0:35,0:35:99:0,105,4182	1/1:0,15:15:42.14:877,42,0	0/0:37,0:37:99:0,111,4496	0/0:46,0:46:99:0,138,5623	0/0:19,0:19:57.18:0,57,2279	0/0:40,0:40:99:0,120,4848	0/0:22,0:22:66.23:0,66,2758	0/0:31,0:31:93.30:0,93,3659	0/0:35,0:35:99:0,105,4387	0/0:35,0:35:99:0,105,4317	0/0:35,0:35:99:0,105,4371	0/0:32,0:32:96.33:0,96,3912	0/0:35,0:35:99:0,102,3996	0/0:31,0:31:93.32:0,93,3850	0/0:51,0:51:99:0,151,6149	0/0:34,0:34:99:0,102,4216	0/0:25,0:25:72.25:0,72,2825	0/0:31,0:31:93.28:0,93,3682	0/0:20,0:20:60.21:0,60,2491	0/0:28,0:28:81.28:0,81,3380	0/0:30,0:30:90.26:0,90,3456	0/0:13,0:13:39.13:0,39,1635
chr10	4366694	.	CT	C	618.26	PASS	AB=0.919;AC=7;AF=0.125;AN=56;BaseQRankSum=6.718;DP=484;FS=0.590;HRun=13;HaplotypeScore=52.6499;InbreedingCoeff=0.5201;MQ=70.17;MQ0=0;MQRankSum=0.338;QD=5.72;ReadPosRankSum=-2.136;VQSLOD=1.2622;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:24,2:25:16.30:16,0,304	0/1:6,1:7:3.89:4,0,124	0/0:15,0:11:11.95:0,12,98	0/1:20,1:13:1.63:2,0,38	0/0:22,2:24:16.29:0,16,457	0/0:15,0:15:30.03:0,30,286	0/0:5,0:5:6.01:0,6,58	1/1:7,20:27:26.86:355,27,0	0/0:9,0:9:21.03:0,21,204	0/0:32,2:34:50.19:0,50,639	0/0:20,1:21:23.12:0,23,372	0/0:15,0:15:23.86:0,24,234	0/0:12,0:12:26.91:0,27,240	0/0:6,0:6:6.48:0,6,60	0/0:13,0:13:24.51:0,25,235	0/0:13,1:14:32.95:0,33,298	1/1:4,23:26:50.69:372,51,0	0/0:25,2:27:35.19:0,35,484	0/0:19,0:19:39.05:0,39,375	0/0:20,0:20:44.96:0,45,412	0/0:12,0:12:30.04:0,30,287	0/0:9,0:9:18.03:0,18,175	0/0:15,0:15:30.03:0,30,286	0/0:8,0:8:9:0,9,83	0/0:23,2:25:32.64:0,33,470	0/0:20,0:20:42.06:0,42,405	0/0:25,0:25:60.05:0,60,569	0/0:12,0:13:38.89:0,39,359
chr10	4367692	.	C	CCTTTT	2176.07	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-7.683;DP=673;FS=11.873;HRun=0;HaplotypeScore=117.9079;InbreedingCoeff=0.9934;MQ=61.28;MQ0=0;MQRankSum=-2.150;QD=62.17;ReadPosRankSum=-6.088;VQSLOD=1.8783;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,114,2374	0/0:7,0:7:21.07:0,21,448	0/0:18,0:19:37.85:0,38,869	0/0:16,0:14:33.11:0,33,627	0/0:23,0:23:54.19:0,54,1147	0/0:21,0:21:57.17:0,57,1129	0/0:13,0:13:36.11:0,36,697	1/1:3,28:35:90.26:2271,90,0	0/0:25,0:25:72.25:0,72,1513	0/0:20,0:20:60.21:0,60,1227	0/0:15,0:15:45.15:0,45,946	0/0:27,0:27:81.26:0,81,1628	0/0:26,0:26:75.24:0,75,1526	0/0:21,0:21:63.20:0,63,1283	0/0:26,0:26:78.26:0,78,1618	0/0:21,0:21:63.20:0,63,1296	0/0:30,0:30:87.23:0,87,1798	0/0:30,0:30:84.27:0,84,1749	0/0:25,0:25:59.91:0,60,1238	0/0:34,0:34:99:0,102,2081	0/0:21,0:21:63.18:0,63,1256	0/0:14,0:14:39.12:0,39,791	0/0:19,0:19:51.18:0,51,1075	0/0:43,0:43:99:0,114,2276	0/0:23,0:23:69.24:0,69,1464	0/0:31,0:31:93.32:0,93,1969	0/0:40,0:40:99:0,105,2173	0/0:8,0:8:24.08:0,24,499
chr10	4368090	.	TA	T	410.47	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=5.512;DP=548;FS=11.776;HRun=7;HaplotypeScore=67.2855;InbreedingCoeff=0.5411;MQ=72.45;MQ0=1;MQRankSum=2.580;QD=9.12;ReadPosRankSum=-4.125;VQSLOD=-0.3368;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:60.15:0,60,714	0/0:7,0:7:18.04:0,18,210	0/0:17,0:14:11.07:0,11,86	0/0:10,0:9:2.26:0,2,53	0/0:24,0:24:71.90:0,72,796	0/0:16,0:16:45.12:0,45,533	0/0:20,0:20:57.12:0,57,677	1/1:5,18:23:53.66:503,54,0	0/0:16,0:16:45.11:0,45,530	0/0:21,0:21:60.17:0,60,715	0/0:27,0:27:72.04:0,72,838	0/0:16,0:16:42.11:0,42,495	0/0:19,0:19:57.13:0,57,656	0/0:14,0:14:39.11:0,39,470	0/0:14,0:14:6.33:0,6,75	0/0:23,0:23:69.18:0,69,814	0/0:41,0:41:99:0,114,1333	0/1:22,0:22:7.51:8,0,160	0/0:25,0:26:71.74:0,72,776	0/0:30,0:30:72.17:0,72,841	0/0:9,0:9:24.07:0,24,295	0/0:10,0:10:24.08:0,24,297	0/0:15,0:15:36.11:0,36,446	0/0:12,0:12:36.08:0,36,419	0/0:32,0:32:44.80:0,45,209	0/0:23,0:23:57.10:0,57,648	0/0:26,0:25:78.15:0,78,904	0/0:9,0:9:27.08:0,27,327
chr10	4370508	.	GGT	G	140.14	PASS	AB=0.980;AC=14;AF=0.280;AN=50;BaseQRankSum=3.000;DP=603;FS=8.778;HRun=0;HaplotypeScore=91.3202;InbreedingCoeff=0.0691;MQ=56.52;MQ0=29;MQRankSum=-1.819;QD=0.52;ReadPosRankSum=1.979;VQSLOD=0.4757;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:42,5:41:5.99:53,6,0	0/0:6,0:5:9.01:0,9,104	./.	./.	0/1:21,0:20:7.45:7,0,138	0/0:20,0:18:20.34:0,20,224	0/0:29,0:29:10.91:0,11,106	./.	0/0:18,0:18:9.01:0,9,108	0/1:28,1:27:28.52:29,0,34	0/1:13,0:13:5.82:6,0,79	0/1:18,0:18:19.96:20,0,72	0/0:16,0:16:6.97:0,7,236	0/0:23,0:22:7.51:0,8,264	0/0:14,0:17:2.22:0,2,8	0/0:17,0:15:20.95:0,21,251	0/0:23,2:25:14.02:0,14,77	0/0:14,2:13:10.13:0,10,49	0/1:22,2:20:14.79:15,0,32	0/0:14,0:14:6:0,6,52	0/1:37,2:38:19.57:20,0,442	0/0:14,0:14:9.03:0,9,125	0/1:15,0:13:12.27:12,0,152	0/0:38,0:38:35.87:0,36,407	0/0:14,5:13:5.09:0,5,20	1/1:20,2:22:6.49:64,6,0	0/1:29,0:28:6.77:26,0,7	1/1:10,1:10:3.01:32,3,0
chr10	4370531	.	GTGTGTGTGTGTGTGTGTGTGTGTGTCTGTCTGTC	G	1262.04	PASS	AB=0.972;AC=6;AF=0.107;AN=56;BaseQRankSum=4.086;DP=626;FS=0.000;HRun=0;HaplotypeScore=368.4145;InbreedingCoeff=0.5003;MQ=47.24;MQ0=48;MQRankSum=-2.686;QD=11.91;ReadPosRankSum=2.931;VQSLOD=1.3686;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:48,0:40:86.77:87,0,370	0/0:12,0:9:18.53:0,19,1129	0/0:6,0:2:6.01:0,6,56	0/0:12,0:5:12.04:0,12,234	0/0:24,0:22:45.15:0,45,3045	0/0:31,0:27:57.18:0,57,3828	0/0:31,0:30:28.10:0,28,1230	0/0:19,0:17:46.21:0,46,746	0/0:18,0:16:39.12:0,39,2072	0/0:24,0:20:51.08:0,51,1991	0/0:14,0:14:21.07:0,21,1433	0/0:20,0:20:43.86:0,44,2715	0/0:18,0:17:43.37:0,43,3186	0/0:21,0:20:45.63:0,46,3158	0/0:21,0:18:21.99:0,22,1300	0/0:19,0:16:36.56:0,37,1839	0/0:24,0:24:46.09:0,46,1476	0/0:16,0:12:36.05:0,36,1258	0/0:16,0:11:32.32:0,32,1247	0/0:11,0:11:15.51:0,16,641	0/0:56,0:52:99:0,118,7448	0/0:16,0:16:39.10:0,39,2279	0/0:18,0:15:27.54:0,28,2042	0/0:55,0:50:99:0,102,7638	0/0:17,0:11:15.05:0,15,849	0/1:16,0:14:99:714,0,102	1/1:6,26:31:4.22:300,4,0	1/1:9,0:7:12.01:284,12,0
chr10	4370555	.	GTCTGTCTGTC	G	1544.58	PASS	AB=0.971;AC=11;AF=0.212;AN=52;BaseQRankSum=6.540;DP=567;FS=18.495;HRun=0;HaplotypeScore=164.6832;InbreedingCoeff=0.4101;MQ=47.81;MQ0=42;MQRankSum=-2.229;QD=8.98;ReadPosRankSum=-0.356;VQSLOD=0.9283;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:38,0:30:8.87:138,9,0	0/0:12,0:10:17.89:0,18,330	./.	./.	0/0:22,0:20:36.11:0,36,972	0/0:29,0:25:60.11:0,60,1328	0/0:26,0:24:32.68:0,33,694	0/0:16,0:12:0:0,0,0	0/0:15,0:14:36.09:0,36,760	0/1:15,0:11:5.28:5,0,576	0/0:10,0:10:15.05:0,15,369	0/0:19,0:19:14.26:0,14,1037	0/0:18,0:17:43.31:0,43,928	0/1:22,0:23:42.27:42,0,335	0/0:22,0:19:30.10:0,30,789	0/0:17,0:14:27.06:0,27,550	0/1:22,0:22:99:464,0,173	0/0:17,0:13:27.53:0,28,560	0/1:13,0:11:24.90:25,0,285	0/0:16,0:16:30.47:0,30,635	0/0:56,0:52:99:0,103,2484	0/0:12,0:12:30.09:0,30,783	0/0:16,0:14:18.48:0,18,551	0/0:52,0:47:99:0,99,2688	0/0:19,0:13:27.09:0,27,523	1/1:8,16:21:45.34:767,45,0	0/1:28,0:28:25.50:27,0,25	1/1:7,0:5:14.84:230,15,0
chr10	4371016	.	GATGT	G	2999.48	PASS	AB=0.921;AC=31;AF=0.620;AN=50;BaseQRankSum=9.326;DP=712;FS=6.912;HRun=0;HaplotypeScore=130.1773;InbreedingCoeff=0.2569;MQ=72.25;MQ0=4;MQRankSum=-0.868;QD=6.31;ReadPosRankSum=0.628;VQSLOD=2.2793;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:25:2.99:28,3,0	1/1:7,6:13:12.04:182,12,0	./.	./.	1/1:6,3:9:6.02:90,6,0	0/0:24,0:24:15.05:0,15,346	0/0:22,0:22:3.01:0,3,69	./.	0/0:24,0:24:33.11:0,33,761	0/1:24,3:28:99:100,0,571	0/1:20,1:21:21.23:21,0,460	0/0:34,1:35:11.84:0,12,1017	1/1:16,15:31:42.14:634,42,0	1/1:30,15:44:42.14:634,42,0	1/1:22,0:37:15.02:140,15,0	0/0:34,0:34:30.10:0,30,692	1/1:19,0:23:3:28,3,0	1/1:15,0:17:6.01:56,6,0	0/1:23,1:23:30.24:30,0,262	0/1:13,1:15:30.25:30,0,245	0/1:34,14:48:36.22:420,0,36	0/1:27,0:27:9.19:9,0,725	0/0:13,0:13:15.05:0,15,344	0/1:20,2:22:72.56:73,0,259	1/1:7,0:11:6.01:56,6,0	1/1:28,9:37:31.24:474,31,0	1/1:33,0:36:6.01:56,6,0	1/1:2,0:6:12.01:112,12,0
chr10	4371079	.	CAGGCAG	C	1436.27	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=6.282;DP=634;FS=14.867;HRun=0;HaplotypeScore=158.3107;InbreedingCoeff=0.9899;MQ=66.04;MQ0=2;MQRankSum=-8.172;QD=31.92;ReadPosRankSum=1.911;VQSLOD=2.3239;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:75.73:0,76,2436	0/0:11,0:11:20.68:0,21,714	0/0:28,0:19:50.40:0,50,1358	0/0:25,0:16:39.05:0,39,870	0/0:14,0:14:33.11:0,33,1046	0/0:15,0:15:39.12:0,39,1111	0/0:20,0:20:60.19:0,60,1957	0/0:47,0:47:99:0,108,3356	0/0:29,0:29:78.27:0,78,2522	0/0:30,0:30:66.22:0,66,2119	0/0:12,0:12:24.08:0,24,766	0/0:27,0:27:72.23:0,72,2309	0/0:28,0:28:68.95:0,69,2221	0/0:36,0:35:84.29:0,84,2709	0/0:40,0:40:87.30:0,87,2657	0/0:23,0:23:54.19:0,54,1847	0/0:22,0:22:51.18:0,51,1702	0/0:15,0:15:34.83:0,35,1062	0/0:15,0:15:36.12:0,36,1218	0/0:12,0:12:27.09:0,27,918	0/0:36,0:36:81.28:0,81,2555	0/0:27,0:27:69.24:0,69,2294	0/0:15,0:15:39.13:0,39,1280	0/0:18,0:18:42.14:0,42,1403	0/0:9,0:9:21.54:0,22,611	1/1:11,12:22:36.12:798,36,0	1/1:3,12:15:18.06:380,18,0	1/1:0,7:7:18.06:399,18,0
chr10	4371351	.	C	CAG	337.23	PASS	AB=0.978;AC=4;AF=0.071;AN=56;BaseQRankSum=4.769;DP=446;FS=4.362;HRun=0;HaplotypeScore=61.2728;InbreedingCoeff=0.3717;MQ=59.49;MQ0=12;MQRankSum=-1.323;QD=6.36;ReadPosRankSum=0.457;VQSLOD=2.7150;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:42.10:0,42,593	0/0:2,0:2:6.02:0,6,88	0/1:21,0:13:46.95:47,0,326	0/0:20,0:13:30.03:0,30,383	0/0:5,0:4:12.04:0,12,177	0/0:10,0:9:27.02:0,27,352	0/0:43,0:43:99:0,105,1492	0/1:11,0:7:7.99:8,0,168	0/0:22,0:22:60.66:0,61,857	0/0:11,0:11:33.07:0,33,461	0/0:4,0:4:9.02:0,9,113	0/0:28,0:28:72.09:0,72,1048	0/0:21,0:21:57.13:0,57,768	0/0:12,0:11:32.95:0,33,434	0/0:15,0:14:42.11:0,42,577	0/0:9,0:9:21.04:0,21,270	1/1:3,17:20:21.07:392,21,0	0/0:17,0:16:45.09:0,45,616	0/0:12,0:10:21.07:0,21,309	0/0:7,0:7:9.03:0,9,132	0/0:67,0:65:99:0,166,2399	0/0:4,0:4:12.04:0,12,177	0/0:6,0:6:15.05:0,15,220	0/0:30,0:30:75.25:0,75,1089	0/0:6,0:6:15.05:0,15,221	0/0:14,0:13:33.10:0,33,455	0/0:9,0:9:27.05:0,27,373	0/0:3,0:3:6.02:0,6,88
chr10	4371497	.	C	CT	1155.51	PASS	AB=0.574;AC=5;AF=0.104;AN=48;BaseQRankSum=-4.611;DP=347;FS=1.529;HRun=2;HaplotypeScore=44.5340;InbreedingCoeff=0.5703;MQ=55.08;MQ0=32;MQRankSum=0.594;QD=26.87;ReadPosRankSum=2.526;VQSLOD=3.4537;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:26.14:0,26,333	0/0:3,0:3:6.02:0,6,74	0/0:15,0:6:18.03:0,18,205	0/0:24,0:15:44.73:0,45,524	./.	0/0:5,0:5:12.04:0,12,149	0/0:29,0:27:72.17:0,72,858	0/0:5,0:4:9.03:0,9,112	0/0:16,0:14:39.12:0,39,483	0/0:7,0:5:15.05:0,15,186	./.	0/0:22,0:20:54.17:0,54,669	0/0:16,0:14:39.12:0,39,483	0/0:16,0:16:42.13:0,42,520	1/1:0,13:12:33.11:475,33,0	0/0:18,0:17:51.16:0,51,631	0/0:14,0:14:39.12:0,39,483	0/1:7,20:26:82.42:711,0,82	0/0:8,0:4:9.03:0,9,112	./.	0/0:54,0:45:96.30:0,96,1189	0/0:2,0:2:3.01:0,3,37	./.	0/0:19,0:18:45.14:0,45,557	1/1:1,2:2:6.02:86,6,0	0/0:8,0:7:21.03:0,21,244	0/0:8,0:8:24.07:0,24,295	0/0:3,0:3:9.03:0,9,112
chr10	4371554	.	AG	A	97.01	PASS	AC=4;AF=0.111;AN=36;BaseQRankSum=1.518;DP=650;FS=9.211;HRun=2;HaplotypeScore=37.8680;InbreedingCoeff=0.6908;MQ=26.31;MQ0=386;MQRankSum=-0.876;QD=7.46;ReadPosRankSum=-0.650;VQSLOD=-0.2210;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:5:15.05:0,15,222	0/0:4,0:1:3:0,3,25	./.	./.	./.	0/0:24,0:10:25.18:0,25,300	0/0:110,0:19:42.12:0,42,600	./.	0/0:29,0:7:18.06:0,18,262	0/0:7,0:2:6.02:0,6,81	./.	0/0:37,0:15:27.09:0,27,404	0/0:22,0:13:33.11:0,33,492	0/0:34,0:15:36.11:0,36,519	0/0:15,0:9:18.05:0,18,250	0/0:19,0:13:35.61:0,36,503	0/0:30,0:12:33.04:0,33,428	0/0:22,1:15:35.16:0,35,539	./.	./.	0/0:146,0:27:26.37:0,26,551	./.	./.	0/0:48,0:19:41.35:0,41,590	0/0:6,0:1:3:0,3,27	1/1:3,2:2:6.02:78,6,0	1/1:5,3:4:9.03:117,9,0	./.
chr10	4371603	.	A	AG	644.94	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-5.196;DP=482;FS=30.915;HRun=1;HaplotypeScore=45.8061;InbreedingCoeff=0.6305;MQ=46.61;MQ0=59;MQRankSum=-0.712;QD=30.71;ReadPosRankSum=-5.321;VQSLOD=0.5497;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:14:33.11:0,33,428	0/0:12,0:9:18.06:0,18,234	0/0:26,0:9:21.03:0,21,254	0/0:23,0:7:18.03:0,18,206	0/0:5,0:5:6.02:0,6,78	0/0:9,0:7:13.82:0,14,131	0/0:31,0:21:54.07:0,54,700	1/1:1,20:19:54.10:739,54,0	0/0:16,0:16:45.13:0,45,569	0/0:13,0:12:30.08:0,30,374	0/0:5,0:5:12.04:0,12,156	0/0:30,0:27:63.19:0,63,817	0/0:16,0:15:39.13:0,39,506	0/0:21,0:18:42.14:0,42,545	0/0:16,0:15:36.11:0,36,452	0/0:19,0:19:43.37:0,43,567	0/0:21,0:18:51.12:0,51,642	0/0:24,0:24:69.20:0,69,879	0/0:15,0:9:21.06:0,21,261	0/0:6,0:4:6.02:0,6,78	0/0:47,0:40:85.51:0,86,1126	0/0:8,0:7:18.05:0,18,219	0/0:8,0:5:12:0,12,137	0/0:30,1:24:39.55:0,40,540	0/0:5,0:4:12.04:0,12,156	0/0:9,0:5:12.04:0,12,156	0/0:21,0:20:57.19:0,57,740	0/0:2,0:1:3.01:0,3,39
chr10	4372026	.	TTTTTTTTA	T	1351.33	PASS	AB=1.000;AC=11;AF=0.212;AN=52;BaseQRankSum=-2.213;DP=232;FS=5.838;HRun=0;HaplotypeScore=50.2573;InbreedingCoeff=0.5659;MQ=67.83;MQ0=2;MQRankSum=-0.524;QD=13.79;ReadPosRankSum=-0.158;VQSLOD=1.0513;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:3,14:17:6.02:116,6,0	0/0:3,0:3:9:0,9,81	./.	0/0:7,0:6:7.75:0,8,74	0/0:10,0:10:24.01:0,24,215	0/0:10,0:10:30.06:0,30,746	0/0:4,0:4:12.01:0,12,110	1/1:26,0:26:74.98:664,75,0	0/0:1,0:1:3:0,3,28	0/0:10,0:10:30:0,30,461	0/0:4,0:4:6.01:0,6,161	0/0:3,0:3:9.02:0,9,189	0/0:2,0:2:2.98:0,3,22	0/0:1,0:1:3:0,3,28	0/0:7,0:7:5.88:0,6,36	0/0:4,0:4:9:0,9,81	0/0:26,0:26:29.49:0,29,233	0/1:17,0:17:99:190,0,542	0/0:14,0:14:36.04:0,36,589	0/0:7,0:7:14.71:0,15,123	0/0:4,0:4:12.01:0,12,108	./.	0/0:6,0:6:12.01:0,12,108	0/0:3,0:3:9.01:0,9,170	0/0:5,0:5:2.94:0,3,18	1/1:8,0:8:21.01:212,21,0	1/1:2,6:8:2.72:80,3,0	1/1:1,21:21:9.03:242,9,0
chr10	4373697	.	ACT	A	3027.70	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=11.126;DP=668;FS=7.949;HRun=0;HaplotypeScore=74.2059;InbreedingCoeff=0.9997;MQ=68.02;MQ0=6;MQRankSum=-0.886;QD=34.80;ReadPosRankSum=3.656;VQSLOD=6.0588;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,141,2658	0/0:10,0:10:30.10:0,30,571	0/0:21,0:20:60.16:0,60,1057	0/0:18,0:14:34.63:0,35,555	0/0:30,0:30:87.30:0,87,1679	0/0:21,0:21:63.20:0,63,1184	0/0:22,0:22:60.21:0,60,1132	0/0:26,0:25:75.26:0,75,1412	0/0:17,0:17:51.17:0,51,985	0/0:19,0:19:57.18:0,57,1065	0/0:21,0:21:60.21:0,60,1150	0/0:20,0:20:60.19:0,60,1113	0/0:19,0:19:54.19:0,54,1035	0/0:22,0:22:66.20:0,66,1210	1/1:2,33:34:78.26:1195,78,0	0/0:22,0:22:66.23:0,66,1275	0/0:29,0:29:81.26:0,81,1529	1/1:1,28:29:72.24:1103,72,0	0/0:19,0:18:51.17:0,51,979	0/0:21,0:21:60.21:0,60,1149	0/0:41,0:41:99:0,123,2338	0/0:13,0:13:39.13:0,39,753	0/0:21,0:21:60.21:0,60,1150	0/0:26,0:26:78.27:0,78,1496	1/1:1,22:23:57.19:873,57,0	0/0:30,0:30:90.31:0,90,1739	0/0:26,0:26:78.27:0,78,1486	0/0:17,0:17:51.17:0,51,985
chr10	4374474	.	GA	G	5419.33	PASS	AB=0.941;AC=20;AF=0.357;AN=56;BaseQRankSum=13.498;DP=727;FS=1.732;HRun=10;HaplotypeScore=72.3988;InbreedingCoeff=0.8708;MQ=70.50;MQ0=0;MQRankSum=-2.885;QD=18.69;ReadPosRankSum=1.844;VQSLOD=5.7341;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,33:41:86.95:755,87,0	0/0:11,0:11:33.09:0,33,365	0/0:19,0:18:35.41:0,35,330	0/1:16,0:14:1.30:1,0,153	0/0:33,2:35:60.28:0,60,892	0/0:27,0:29:78.04:0,78,844	0/0:18,0:18:45.11:0,45,489	1/1:6,28:34:80.94:695,81,0	0/0:23,0:23:63.14:0,63,678	0/0:19,0:20:47.96:0,48,509	0/1:13,2:15:6.99:7,0,386	0/0:29,0:30:77.99:0,78,816	0/0:33,1:34:67.20:0,67,969	0/0:29,0:29:75.19:0,75,821	1/1:3,32:35:86.98:755,87,0	0/0:34,3:37:64.18:0,64,929	1/1:4,16:20:44.99:390,45,0	1/1:2,18:20:35.99:312,36,0	0/0:23,0:23:66.15:0,66,718	0/0:24,2:26:5.06:0,5,512	0/0:29,0:29:81.21:0,81,890	0/0:31,0:31:87.23:0,87,955	0/0:21,1:24:30.70:0,31,518	0/0:19,0:19:48.12:0,48,524	1/1:1,20:21:56.99:495,57,0	1/1:2,32:34:95.97:830,96,0	1/1:6,36:42:99:911,105,0	1/1:1,10:12:32.02:266,32,0
chr10	4375718	.	CAA	C	929.63	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.622;DP=589;FS=0.000;HRun=8;HaplotypeScore=70.0189;InbreedingCoeff=0.9794;MQ=74.81;MQ0=0;MQRankSum=0.359;QD=28.17;ReadPosRankSum=-3.724;VQSLOD=2.7615;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:1,0:21:49.91:0,50,175	0/0:6,0:6:18.05:0,18,276	0/0:9,0:9:19.69:0,20,275	0/0:10,0:11:19.04:0,19,291	0/0:23,0:23:60.21:0,60,1015	0/0:28,0:28:81.28:0,81,1365	0/0:10,0:10:27.09:0,27,457	1/1:5,28:33:84.25:1025,84,0	0/0:16,0:16:48.16:0,48,812	0/0:32,0:33:95.81:0,96,1558	0/0:24,0:24:60.21:0,60,1010	0/0:22,0:22:57.19:0,57,961	0/0:26,0:26:75.26:0,75,1256	0/0:18,0:18:54.18:0,54,911	0/0:32,0:32:93.30:0,93,1521	0/0:22,0:22:54.17:0,54,864	0/0:16,0:16:48.16:0,48,812	0/0:22,0:22:57.20:0,57,962	0/0:21,0:21:57.20:0,57,964	0/0:24,0:24:66.22:0,66,1092	0/0:16,0:16:45.15:0,45,759	0/0:26,0:27:75.24:0,75,1219	0/0:20,0:20:48.16:0,48,812	0/0:20,0:20:51.13:0,51,832	0/0:21,0:21:63.22:0,63,1066	0/0:21,0:21:57.19:0,57,940	0/0:28,0:28:78.27:0,78,1317	0/0:19,0:19:57.20:0,57,963
chr10	4376992	.	GC	G	630.67	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.403;DP=657;FS=3.830;HRun=6;HaplotypeScore=65.4686;InbreedingCoeff=0.9980;MQ=88.18;MQ0=0;MQRankSum=0.515;QD=23.36;ReadPosRankSum=-3.971;VQSLOD=1.7854;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,99,1269	0/0:10,0:10:30.10:0,30,393	0/0:25,0:25:45.88:0,46,718	0/0:23,1:24:31.25:0,31,724	0/0:27,0:27:69.20:0,69,880	0/0:24,0:24:63.20:0,63,825	0/0:19,0:19:57.19:0,57,750	1/1:4,23:27:69.14:726,69,0	0/0:24,0:24:69.22:0,69,902	0/0:17,0:17:45.15:0,45,592	0/0:25,0:25:75.24:0,75,984	0/0:27,0:27:81.25:0,81,1050	0/0:22,0:22:60.20:0,60,789	0/0:21,0:21:60.18:0,60,771	0/0:27,0:27:81.26:0,81,1066	0/0:27,0:27:75.20:0,75,954	0/0:40,0:40:99:0,114,1468	0/0:28,0:28:81.24:0,81,1035	0/0:11,0:11:27.09:0,27,355	0/0:15,0:15:45.15:0,45,592	0/0:32,0:32:96.31:0,96,1255	0/0:15,0:15:42.12:0,42,538	0/0:18,0:18:51.17:0,51,670	0/0:25,0:25:69.21:0,69,893	0/0:26,0:26:75.21:0,75,955	0/0:26,0:26:78.25:0,78,1026	0/0:21,0:21:57.18:0,57,748	0/0:18,0:18:51.14:0,51,642
chr10	4379439	.	GA	G	2858.64	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=6.757;DP=663;FS=5.206;HRun=10;HaplotypeScore=73.8928;InbreedingCoeff=0.9767;MQ=73.49;MQ0=5;MQRankSum=1.649;QD=18.21;ReadPosRankSum=0.340;VQSLOD=4.4636;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,34:39:98:839,98,0	0/0:13,0:14:32.91:0,33,337	0/0:33,0:26:34.72:0,35,339	0/0:22,0:12:10.76:0,11,96	0/0:32,0:35:70.29:0,70,957	0/0:23,2:25:46.13:0,46,720	0/0:19,0:19:48.12:0,48,523	1/1:6,21:27:62.96:547,63,0	0/0:17,0:17:42.10:0,42,452	0/0:25,0:25:60.62:0,61,651	0/0:29,0:29:78.20:0,78,854	0/0:27,0:27:72.04:0,72,746	0/0:14,0:14:36.10:0,36,398	0/0:17,0:17:45.12:0,45,498	0/0:4,0:33:62.28:0,62,312	0/0:29,0:29:78.19:0,78,851	1/1:2,20:22:53.99:469,54,0	0/0:7,0:32:68.66:0,69,388	0/0:27,0:27:42.11:0,42,464	0/0:30,0:30:66.18:0,66,730	0/0:3,0:3:9.02:0,9,100	0/0:14,0:14:39.11:0,39,431	0/0:16,0:16:42.10:0,42,449	0/0:14,0:14:30.08:0,30,332	0/0:2,0:27:61.47:0,61,303	1/1:9,27:36:44.80:618,45,0	1/1:2,24:26:50.98:443,51,0	1/1:2,5:7:15:130,15,0
chr10	4379869	.	TC	T	1412.99	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.934;DP=658;FS=3.514;HRun=5;HaplotypeScore=63.9574;InbreedingCoeff=0.9962;MQ=76.47;MQ0=1;MQRankSum=3.400;QD=28.26;ReadPosRankSum=-5.839;VQSLOD=0.8174;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:96.30:0,96,1289	0/0:8,0:8:24.08:0,24,328	0/0:21,0:21:54.13:0,54,688	0/0:23,0:21:53.58:0,54,590	0/0:23,0:23:63.15:0,63,794	0/0:24,0:24:69.21:0,69,925	0/0:20,0:20:60.20:0,60,820	1/1:4,46:50:99:1508,138,0	0/0:22,0:22:63.20:0,63,848	0/0:28,0:28:81.25:0,81,1079	0/0:23,0:23:57.17:0,57,748	0/0:24,0:24:69.21:0,69,926	0/0:19,0:19:57.18:0,57,762	0/0:21,0:21:63.20:0,63,844	0/0:32,0:32:93.31:0,93,1270	0/0:27,0:27:81.25:0,81,1078	0/0:42,0:42:99:0,126,1703	0/0:17,0:17:48.16:0,48,656	0/0:23,0:23:66.19:0,66,854	0/0:27,0:27:69.23:0,69,937	0/0:27,0:27:69.23:0,69,938	0/0:9,0:9:27.09:0,27,368	0/0:12,0:12:36.12:0,36,492	0/0:15,0:15:42.10:0,42,552	0/0:13,0:13:39.13:0,39,528	0/0:30,0:30:84.27:0,84,1133	0/0:31,0:31:93.31:0,93,1265	0/0:13,0:13:30.10:0,30,409
chr10	4380310	.	CACA	C	3548.31	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=11.499;DP=729;FS=0.468;HRun=0;HaplotypeScore=93.3126;InbreedingCoeff=0.9418;MQ=55.36;MQ0=26;MQRankSum=1.473;QD=47.31;ReadPosRankSum=0.940;VQSLOD=5.1087;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,126,2843	0/0:9,0:9:27.09:0,27,622	0/0:21,0:4:9:0,9,161	0/0:26,0:3:6.02:0,6,133	0/0:30,0:30:84.29:0,84,1929	0/0:28,0:28:84.29:0,84,1933	0/0:17,0:17:51.17:0,51,1112	0/0:43,0:37:99:0,102,2322	0/0:25,0:25:75.25:0,75,1687	0/0:31,0:31:90.31:0,90,2050	0/0:20,0:20:60.19:0,60,1326	0/0:27,0:27:81.25:0,81,1779	0/0:20,0:20:57.20:0,57,1314	0/0:33,0:33:99:0,99,2272	0/0:35,0:34:99:0,99,2216	0/0:23,0:23:66.23:0,66,1522	0/0:34,0:34:99:0,102,2313	0/0:27,0:27:81.23:0,81,1775	0/0:20,0:16:39.13:0,39,852	0/0:31,0:31:93.26:0,93,2008	0/0:30,0:30:87.27:0,87,1896	0/0:17,0:17:51.18:0,51,1176	0/0:26,0:26:78.24:0,78,1710	0/0:26,0:26:72.25:0,72,1655	0/0:13,0:13:39.13:0,39,899	1/1:2,28:31:21.09:1414,21,0	1/1:0,36:36:99:1725,102,0	1/1:0,8:8:24.08:409,24,0
chr10	4380395	.	TA	T	337.53	PASS	AB=0.938;AC=3;AF=0.054;AN=56;BaseQRankSum=2.784;DP=590;FS=6.089;HRun=14;HaplotypeScore=66.8125;InbreedingCoeff=0.4471;MQ=60.35;MQ0=5;MQRankSum=-1.291;QD=6.75;ReadPosRankSum=-2.296;VQSLOD=1.9489;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,3:38:27.22:0,27,598	0/0:8,1:12:3.11:0,3,144	0/0:19,0:10:9:0,9,79	0/1:14,1:7:9.89:10,0,27	0/0:42,0:42:79.57:0,80,827	0/0:19,0:21:44.64:0,45,375	0/0:10,0:12:29.87:0,30,265	1/1:10,24:35:64.27:429,64,0	0/0:12,0:12:29.66:0,30,240	0/0:31,0:31:57.02:0,57,516	0/0:12,0:15:38.62:0,39,311	0/0:17,2:20:25.37:0,25,340	0/0:12,1:14:1.52:0,2,134	0/0:16,0:16:42.01:0,42,378	0/0:26,0:27:47.52:0,48,601	0/0:17,2:20:8.15:0,8,323	0/0:6,0:32:62.97:0,63,353	0/0:14,0:14:33:0,33,299	0/0:15,1:16:18.40:0,18,300	0/0:25,0:25:47.75:0,48,416	0/0:11,0:11:7.33:0,7,203	0/0:13,0:13:30.03:0,30,278	0/0:19,0:19:33.01:0,33,298	0/0:10,0:10:27.02:0,27,249	0/0:16,2:18:15.90:0,16,313	0/0:30,1:30:45.44:0,45,552	0/0:31,0:31:77.98:0,78,698	0/0:17,1:17:21.42:0,21,331
chr10	4380914	.	TCATTA	T	811.40	PASS	AB=1.000;AC=3;AF=0.056;AN=54;BaseQRankSum=6.439;DP=794;FS=0.000;HRun=0;HaplotypeScore=167.5198;InbreedingCoeff=0.6253;MQ=91.15;MQ0=1;MQRankSum=-0.118;QD=16.90;ReadPosRankSum=-0.371;VQSLOD=2.8950;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,22:31:48.16:880,48,0	0/0:7,0:7:12.04:0,12,340	0/0:42,0:35:31.87:0,32,349	0/0:71,0:60:42.21:0,42,651	0/0:33,0:33:81.20:0,81,2135	0/0:14,0:13:30.08:0,30,719	0/0:31,0:31:54.17:0,54,1399	./.	0/0:38,0:38:78.27:0,78,2143	0/0:43,0:43:84.28:0,84,2131	0/0:14,0:14:39.12:0,39,994	0/0:21,0:21:33.11:0,33,935	0/0:30,0:30:72.23:0,72,1935	0/0:28,0:28:66.20:0,66,1701	0/0:34,0:34:75.24:0,75,2053	0/0:35,0:35:63.20:0,63,1686	0/0:18,0:18:39.13:0,39,1041	0/0:8,0:8:15.05:0,15,425	0/0:22,0:22:30.09:0,30,781	0/0:28,0:28:63.22:0,63,1725	0/0:45,0:45:66.23:0,66,1762	0/0:25,0:25:51.16:0,51,1384	0/0:26,0:26:54.18:0,54,1372	0/0:27,0:27:51.11:0,51,1307	0/0:28,0:28:69.17:0,69,1793	0/0:20,0:20:42.12:0,42,1061	0/0:33,0:33:69.20:0,69,1819	0/1:17,0:17:36.83:37,0,278
chr10	4381410	.	CGTGTGTGCGTGCGTGT	C	803.17	PASS	AB=1.000;AC=4;AF=0.071;AN=56;BaseQRankSum=5.654;DP=672;FS=25.175;HRun=0;HaplotypeScore=274.4116;InbreedingCoeff=0.3317;MQ=67.17;MQ0=13;MQRankSum=-0.190;QD=11.00;ReadPosRankSum=-1.105;VQSLOD=0.8721;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:31.04:0,31,1913	0/0:7,0:7:12.04:0,12,321	0/0:30,0:20:7.31:0,7,588	0/0:40,0:26:34:0,34,923	0/0:20,0:20:54.03:0,54,1934	0/0:29,0:28:62.35:0,62,2153	0/0:29,0:29:62.17:0,62,2129	1/1:6,23:28:62.58:888,63,0	0/0:18,0:18:45.61:0,46,1846	0/0:21,0:20:51.09:0,51,1931	0/0:13,0:13:27.06:0,27,874	0/0:23,0:23:48.15:0,48,1754	0/0:22,0:22:60.15:0,60,2558	0/0:23,0:23:66.07:0,66,2191	0/0:28,0:28:3.34:0,3,851	0/0:17,0:17:42.10:0,42,1488	0/1:31,0:31:13.70:14,0,985	0/0:18,0:18:15.46:0,15,894	0/0:23,0:23:54.09:0,54,935	0/0:17,0:16:36.12:0,36,975	0/0:63,0:63:99:0,161,6106	0/0:20,0:20:45.14:0,45,1299	0/0:15,0:14:35.94:0,36,1114	0/0:30,0:30:75.16:0,75,3039	0/1:13,0:13:12.74:13,0,309	0/0:28,0:26:27.19:0,27,1712	0/0:22,0:22:2.48:0,2,710	0/0:12,0:10:4.55:0,5,625
chr10	4381418	.	C	CGTGT	811.60	PASS	AB=1.000;AC=16;AF=0.286;AN=56;BaseQRankSum=7.674;DP=674;FS=37.928;HRun=0;HaplotypeScore=140.5088;InbreedingCoeff=0.6807;MQ=60.57;MQ0=17;MQRankSum=-2.284;QD=3.74;ReadPosRankSum=-4.484;VQSLOD=-0.6403;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:34,0:34:66.32:66,0,173	0/0:5,0:5:11.71:0,12,155	0/0:24,0:14:28.78:0,29,414	0/0:38,0:24:51.22:0,51,703	0/0:20,0:20:39.90:0,40,681	0/0:28,0:27:61.45:0,61,952	0/0:29,0:28:58.41:0,58,934	0/1:26,0:24:13.63:116,0,14	0/0:17,0:17:45.06:0,45,710	0/0:20,0:18:45.07:0,45,677	0/0:14,0:14:26.84:0,27,339	0/0:20,0:20:27.86:0,28,665	0/0:24,0:23:51.50:0,52,834	0/0:26,0:26:20.41:0,20,799	1/1:30,0:30:25.86:226,26,0	0/0:17,0:17:42.07:0,42,576	1/1:12,19:34:4.96:199,5,0	1/1:18,0:17:17.66:141,18,0	0/0:18,0:18:35.99:0,36,603	0/0:16,0:15:11.98:0,12,391	0/0:72,0:72:99:0,120,2023	0/0:19,0:19:45.11:0,45,626	0/0:16,0:15:33.03:0,33,453	0/0:34,0:34:75.04:0,75,1014	1/1:13,0:13:8.91:72,9,0	1/1:30,0:28:1.32:123,1,0	1/1:20,0:20:4.53:35,5,0	1/1:12,0:10:3.13:7,3,0
chr10	4382262	.	A	AT	570.06	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-5.278;DP=585;FS=4.025;HRun=9;HaplotypeScore=61.2125;InbreedingCoeff=0.9493;MQ=66.32;MQ0=2;MQRankSum=0.167;QD=19.00;ReadPosRankSum=-4.115;VQSLOD=2.5323;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,108,927	0/0:5,0:5:12:0,12,104	0/0:15,0:10:20.29:0,20,145	0/0:23,0:15:37.12:0,37,298	0/0:19,0:20:54.25:0,54,448	0/0:27,1:28:38.80:0,39,566	0/0:19,0:18:47.99:0,48,417	1/1:9,20:30:42.96:665,43,0	0/0:13,0:13:35.99:0,36,312	0/0:22,0:22:53.98:0,54,467	0/0:14,0:14:35.98:0,36,313	0/0:21,0:21:62.99:0,63,547	0/0:11,0:11:26.99:0,27,234	0/0:14,0:14:35.98:0,36,313	0/0:35,0:35:89.95:0,90,781	0/0:18,0:18:50.96:0,51,438	0/0:26,0:26:71.98:0,72,625	0/0:33,0:33:86.98:0,87,755	0/0:27,0:27:65.97:0,66,573	0/0:22,0:22:59.94:0,60,513	0/0:22,0:22:50.99:0,51,443	0/0:20,0:20:47.98:0,48,416	0/0:24,0:24:68.95:0,69,590	0/0:20,0:21:53.02:0,53,449	0/0:17,0:17:47.99:0,48,417	0/0:19,0:19:53.96:0,54,460	0/0:18,0:17:41.98:0,42,365	0/0:5,0:5:15:0,15,130
chr10	4383163	.	A	ACG	1291.79	PASS	AB=1.000;AC=8;AF=0.143;AN=56;BaseQRankSum=5.748;DP=663;FS=0.535;HRun=0;HaplotypeScore=94.6644;InbreedingCoeff=0.4397;MQ=71.61;MQ0=3;MQRankSum=-0.572;QD=8.44;ReadPosRankSum=0.070;VQSLOD=2.7856;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:35,15:50:18.43:1108,18,0	0/0:9,0:9:26.42:0,26,284	0/1:10,0:10:0.73:1,0,24	0/1:19,0:17:12.47:12,0,28	0/0:20,0:19:38.75:0,39,428	0/0:23,0:23:54.11:0,54,631	0/0:25,0:25:54.01:0,54,569	0/0:19,0:19:13.68:0,14,135	0/0:23,0:23:53.61:0,54,541	0/0:27,0:27:65.86:0,66,673	0/0:14,0:14:29.82:0,30,300	0/0:30,0:30:66.05:0,66,687	0/0:28,0:27:66.08:0,66,712	0/0:33,0:33:54.07:0,54,597	0/0:31,0:30:2.40:0,2,145	0/0:28,0:28:63.07:0,63,678	1/1:25,1:26:24.01:281,24,0	0/1:27,0:27:20.42:20,0,195	0/0:24,0:24:41.73:0,42,446	0/0:13,0:13:23.88:0,24,210	0/0:47,0:46:98.92:0,99,952	0/0:17,0:17:29.95:0,30,303	0/0:8,0:8:15.01:0,15,151	0/0:30,0:30:68.99:0,69,699	0/1:20,0:20:5.35:5,0,72	0/0:23,0:23:54.09:0,54,601	0/0:24,0:24:50.90:0,51,562	0/0:14,0:14:33:0,33,333
chr10	4383173	.	G	GCACA	2912.94	PASS	AB=0.600;AC=8;AF=0.143;AN=56;BaseQRankSum=-4.769;DP=662;FS=0.000;HRun=0;HaplotypeScore=112.1323;InbreedingCoeff=0.5952;MQ=62.67;MQ0=14;MQRankSum=-1.544;QD=20.96;ReadPosRankSum=2.044;VQSLOD=2.9927;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:62.83:0,63,748	0/0:11,0:11:24.04:0,24,337	0/0:13,0:4:2.92:0,3,17	0/0:20,0:14:2.62:0,3,13	0/0:16,0:15:39.13:0,39,625	0/0:22,0:24:57.57:0,58,879	0/0:23,0:23:48.09:0,48,704	1/1:21,0:18:20.76:215,21,0	0/0:23,0:23:0.17:0,0,551	0/0:22,0:25:51.13:0,51,717	0/0:12,0:12:21.06:0,21,307	0/0:28,0:31:57.17:0,57,850	0/0:22,0:22:45.15:0,45,711	0/0:24,0:24:51.13:0,51,762	1/1:9,22:32:45.15:1092,45,0	0/0:25,0:27:60.14:0,60,876	1/1:1,2:36:13.79:345,14,0	0/1:11,12:25:10.16:714,0,10	0/0:25,0:24:41.96:0,42,595	0/0:10,0:11:21.06:0,21,308	0/0:40,0:47:81.19:0,81,1125	0/0:10,0:13:24.07:0,24,339	0/0:10,0:10:21.07:0,21,310	0/0:28,0:32:42.12:0,42,637	0/1:5,18:24:15.65:695,0,16	0/0:21,0:21:39.13:0,39,602	0/0:27,0:27:52.96:0,53,829	0/0:12,0:12:15.05:0,15,239
chr10	4386456	.	C	CGAG	4402.91	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-9.873;DP=813;FS=2.116;HRun=0;HaplotypeScore=107.5956;InbreedingCoeff=0.9986;MQ=80.91;MQ0=0;MQRankSum=-3.407;QD=57.18;ReadPosRankSum=1.691;VQSLOD=7.0158;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,123,1961	0/0:10,0:10:27.09:0,27,434	0/0:26,0:26:72.23:0,72,1124	0/0:16,0:16:22.44:0,22,441	0/0:37,0:37:93.32:0,93,1486	0/0:32,0:32:96.33:0,96,1536	0/0:29,0:29:78.27:0,78,1250	0/0:32,0:32:78.21:0,78,1180	0/0:24,0:24:60.20:0,60,949	0/0:39,0:39:99:0,108,1732	0/0:25,0:25:72.23:0,72,1127	0/0:33,0:33:96.33:0,96,1540	0/0:25,0:25:72.25:0,72,1153	0/0:27,0:27:78.27:0,78,1250	0/0:37,0:37:99:0,105,1687	0/0:41,0:41:99:0,114,1801	0/0:27,0:27:75.20:0,75,1154	0/0:26,0:26:69.24:0,69,1105	0/0:22,0:22:57.14:0,57,855	0/0:26,0:26:75.26:0,75,1205	0/0:57,0:57:99:0,160,2541	0/0:18,0:18:45.15:0,45,721	0/0:23,0:23:69.24:0,69,1104	0/0:36,0:36:99:0,108,1733	0/0:24,0:24:72.25:0,72,1151	1/1:4,24:28:81.28:1714,81,0	1/1:0,31:34:81.28:1774,81,0	1/1:0,15:15:42.14:915,42,0
chr10	4387956	.	CA	C	1356.93	PASS	AB=0.735;AC=15;AF=0.268;AN=56;BaseQRankSum=8.341;DP=522;FS=1.391;HRun=11;HaplotypeScore=61.5157;InbreedingCoeff=0.6974;MQ=62.73;MQ0=8;MQRankSum=-0.818;QD=7.84;ReadPosRankSum=2.608;VQSLOD=2.0874;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,19:26:39.91:365,40,0	0/0:7,0:7:12.02:0,12,121	0/0:35,0:14:10.89:0,11,85	0/1:34,2:14:1.75:2,0,65	0/0:19,0:20:57.01:0,57,590	0/0:16,2:18:20.41:0,20,399	0/0:21,0:21:60.13:0,60,631	0/0:27,0:28:37.24:0,37,272	0/0:13,0:13:35.96:0,36,364	0/0:17,1:18:20.45:0,20,410	0/0:18,0:18:48.12:0,48,511	0/0:12,0:13:32.91:0,33,327	0/0:10,0:10:30.07:0,30,313	0/0:9,0:10:26.64:0,27,257	0/1:6,8:16:3.96:156,0,4	0/0:10,0:10:21.05:0,21,224	1/1:5,26:31:62.88:513,63,0	0/1:4,4:9:5.95:69,0,6	0/0:14,1:21:4.79:0,5,358	0/0:23,0:24:62.57:0,63,626	0/0:18,1:20:32.04:0,32,509	0/0:13,0:13:36.04:0,36,370	0/0:26,1:27:66.17:0,66,703	0/0:19,0:18:39.10:0,39,416	1/1:2,16:18:7.33:304,7,0	1/1:2,0:16:0.31:52,0,0	1/1:5,0:12:14.25:41,14,0	1/1:0,0:5:10.19:29,10,0
chr10	4389469	.	C	CA	1362.63	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-9.675;DP=824;FS=3.042;HRun=2;HaplotypeScore=77.9861;InbreedingCoeff=0.9990;MQ=79.86;MQ0=0;MQRankSum=-0.061;QD=37.85;ReadPosRankSum=-4.829;VQSLOD=2.1378;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,141,1719	0/0:19,0:19:54.16:0,54,657	0/0:25,0:25:72.19:0,72,865	0/0:31,0:31:83.62:0,84,994	0/0:32,0:32:90.28:0,90,1115	0/0:24,0:24:72.23:0,72,891	0/0:21,0:21:54.17:0,54,669	1/1:0,36:36:99:1458,108,0	0/0:43,0:43:99:0,126,1545	0/0:35,0:35:99:0,99,1208	0/0:25,0:25:72.23:0,72,892	0/0:28,0:28:75.20:0,75,894	0/0:25,0:25:66.21:0,66,818	0/0:34,0:34:99:0,99,1226	0/0:41,0:41:99:0,117,1446	0/0:26,0:26:75.24:0,75,930	0/0:32,0:32:93.29:0,93,1153	0/0:19,0:19:57.18:0,57,705	0/0:23,0:23:66.21:0,66,818	0/0:23,0:23:66.20:0,66,806	0/0:28,0:28:78.22:0,78,941	0/0:33,0:33:96.28:0,96,1165	0/0:22,0:22:60.19:0,60,742	0/0:37,0:37:99:0,102,1263	0/0:27,0:27:81.25:0,81,990	0/0:31,0:31:93.29:0,93,1152	0/0:45,0:45:99:0,120,1483	0/0:9,0:9:27.08:0,27,335
chr10	4389833	.	CCTT	C	1252.72	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.351;DP=743;FS=0.000;HRun=0;HaplotypeScore=99.6803;InbreedingCoeff=0.9959;MQ=70.67;MQ0=0;MQRankSum=-3.373;QD=41.76;ReadPosRankSum=-3.510;VQSLOD=3.9562;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:84.27:0,84,1830	0/0:18,0:18:51.14:0,51,1059	0/0:17,0:17:47.61:0,48,967	0/0:20,0:16:42.10:0,42,794	0/0:31,0:31:93.29:0,93,2042	0/0:25,0:25:72.25:0,72,1587	0/0:9,0:9:21.07:0,21,453	1/1:2,28:30:84.26:1348,84,0	0/0:29,0:29:84.27:0,84,1842	0/0:33,0:33:96.32:0,96,2087	0/0:32,0:32:93.31:0,93,2030	0/0:26,0:26:78.17:0,78,1611	0/0:36,0:36:99:0,102,2285	0/0:16,0:16:48.14:0,48,993	0/0:27,0:27:78.27:0,78,1736	0/0:32,0:32:90.28:0,90,1936	0/0:31,0:31:87.28:0,87,1844	0/0:19,0:19:54.16:0,54,1166	0/0:33,0:33:96.30:0,96,2038	0/0:32,0:32:87.30:0,87,1950	0/0:17,0:17:51.18:0,51,1134	0/0:28,0:28:84.26:0,84,1799	0/0:34,0:34:99:0,99,2136	0/0:14,0:14:39.13:0,39,875	0/0:31,0:31:87.27:0,87,1868	0/0:29,0:29:84.28:0,84,1836	0/0:29,0:28:81.28:0,81,1775	0/0:35,0:35:99:0,105,2177
chr10	4390732	.	CT	C	1344.96	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=8.539;DP=640;FS=2.468;HRun=8;HaplotypeScore=59.7101;InbreedingCoeff=0.9137;MQ=68.78;MQ0=0;MQRankSum=-1.867;QD=15.46;ReadPosRankSum=1.715;VQSLOD=3.7706;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:48.13:0,48,567	0/0:6,0:6:18.06:0,18,217	0/0:24,0:20:26.25:0,26,346	0/0:17,0:12:29.92:0,30,306	0/0:32,0:32:90.27:0,90,1080	0/0:33,0:33:93.27:0,93,1104	0/0:32,0:32:87.25:0,87,1038	0/1:15,0:15:0.71:19,0,1	0/0:17,0:17:45.14:0,45,544	0/0:30,0:30:84.21:0,84,981	0/0:23,0:23:69.19:0,69,810	0/0:20,0:20:57.17:0,57,685	0/0:21,0:21:54.17:0,54,652	0/0:20,0:20:57.15:0,57,674	1/1:5,19:24:42.06:406,42,0	0/0:24,0:24:66.16:0,66,763	0/0:28,0:28:75.23:0,75,903	1/1:2,23:25:60.09:576,60,0	0/0:26,0:26:63.18:0,63,750	0/0:21,0:21:63.12:0,63,721	0/0:11,0:11:27.08:0,27,326	0/0:21,0:21:57.17:0,57,679	0/0:24,0:24:69.21:0,69,833	0/0:17,0:17:48.15:0,48,580	1/1:2,21:23:51.08:493,51,0	0/0:20,0:20:60.18:0,60,724	0/0:50,0:50:99:0,141,1696	0/0:15,0:15:39.06:0,39,432
chr10	4393822	.	AACACACACACACACACAC	A	1742.27	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=5.647;DP=577;FS=1.116;HRun=0;HaplotypeScore=255.5539;InbreedingCoeff=0.7695;MQ=63.27;MQ0=7;MQRankSum=-5.768;QD=30.04;ReadPosRankSum=0.669;VQSLOD=2.4406;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:42.09:0,42,2752	0/0:10,0:10:18.06:0,18,992	0/0:30,0:19:5.98:0,6,52	0/0:35,0:26:3:0,3,27	0/0:10,0:12:12.51:0,13,813	0/0:22,0:22:33.10:0,33,2174	0/0:27,0:29:54.17:0,54,3687	0/0:25,0:25:51.12:0,51,2023	0/0:12,0:12:27.09:0,27,1928	0/0:14,0:14:24.08:0,24,1337	0/0:13,0:16:24.07:0,24,1531	0/0:12,0:14:15.02:0,15,878	0/0:14,0:16:18.06:0,18,994	0/0:25,0:26:36.12:0,36,2154	1/1:15,9:26:18.95:825,19,0	0/0:22,0:24:48.11:0,48,2823	0/0:17,0:32:48.08:0,48,3102	1/1:8,6:13:4.83:151,5,0	0/0:16,0:13:18.05:0,18,857	0/0:11,0:12:18.04:0,18,617	0/0:40,0:39:54.14:0,54,3211	0/0:15,0:16:33.11:0,33,1975	0/0:4,0:4:2.75:0,3,254	0/0:34,0:35:60.21:0,60,3595	1/1:6,11:18:21.07:897,21,0	0/0:17,0:17:36.12:0,36,2191	0/0:19,0:20:32.27:0,32,1420	0/0:5,0:8:10.59:0,11,505
chr10	4394693	.	T	TTTTG	293.50	PASS	AB=0.909;AC=6;AF=0.107;AN=56;BaseQRankSum=-0.406;DP=481;FS=8.694;HRun=0;HaplotypeScore=85.8500;InbreedingCoeff=0.1430;MQ=44.03;MQ0=58;MQRankSum=-2.632;QD=2.60;ReadPosRankSum=-2.614;VQSLOD=0.3553;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:13,9:23:2.63:3,0,79	0/0:13,0:11:0.63:0,1,97	0/0:32,0:3:2.73:0,3,23	0/0:30,0:6:10.84:0,11,68	0/0:26,0:18:2.44:0,2,153	0/0:19,0:18:23.46:0,23,315	0/0:18,0:16:32.12:0,32,262	0/0:13,0:13:15.01:0,15,168	0/0:10,0:10:21.96:0,22,157	0/0:24,0:20:26.35:0,26,332	0/0:25,0:25:59.94:0,60,465	0/0:11,0:10:23.10:0,23,155	0/0:3,0:2:5.93:0,6,40	0/0:8,0:7:14.76:0,15,123	0/0:7,0:6:8:0,8,68	0/0:8,0:5:10.06:0,10,86	0/1:29,0:22:99:104,0,198	0/0:10,0:7:9.56:0,10,56	0/0:19,0:18:44.44:0,44,348	0/0:17,0:15:35.74:0,36,276	0/0:12,0:9:23.86:0,24,191	0/0:10,0:9:20.83:0,21,157	0/0:14,0:12:23.83:0,24,205	0/0:15,0:12:26.73:0,27,205	0/0:21,0:19:26.61:0,27,208	0/1:23,0:19:91.22:129,0,91	0/1:22,0:23:75.24:75,0,98	1/1:11,0:7:14.16:103,14,0
chr10	4394819	.	GTGTGTGTGTGTGTA	G	1272.60	PASS	AB=0.897;AC=16;AF=0.286;AN=56;BaseQRankSum=5.214;DP=436;FS=2.757;HRun=0;HaplotypeScore=143.7103;InbreedingCoeff=0.5208;MQ=58.07;MQ0=10;MQRankSum=-1.959;QD=8.48;ReadPosRankSum=1.440;VQSLOD=2.6454;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:16,0:16:62.88:63,0,78	0/0:2,0:2:5.99:0,6,197	0/0:22,0:7:2.98:0,3,21	0/1:31,0:11:8.51:9,0,13	0/0:22,0:22:42.17:0,42,2134	0/0:16,0:16:33.58:0,34,1635	0/0:20,0:19:40.02:0,40,1241	1/1:13,0:10:17.91:142,18,0	0/0:15,0:15:8.10:0,8,1340	0/0:19,0:19:46.95:0,47,1904	0/0:8,0:8:4.60:0,5,549	0/0:13,0:13:26.98:0,27,1419	0/0:7,0:7:15.01:0,15,505	0/0:7,0:7:3.43:0,3,164	1/1:12,0:12:20.85:185,21,0	0/0:17,0:17:45.14:0,45,2171	0/1:22,0:22:30.98:31,0,98	1/1:8,0:8:15.75:105,16,0	0/0:10,0:10:20.16:0,20,446	0/0:22,0:22:38.12:0,38,1851	0/0:29,0:29:62.93:0,63,2039	0/0:15,0:15:13.08:0,13,1271	0/0:15,0:14:24.03:0,24,1329	0/0:27,0:27:48.15:0,48,2608	1/1:7,0:7:11.91:91,12,0	0/1:7,16:23:99:559,0,271	1/1:3,6:9:3.01:122,3,0	1/1:9,0:9:16.53:148,17,0
chr10	4394831	.	GTA	G	1292.70	PASS	AB=1.000;AC=24;AF=0.429;AN=56;BaseQRankSum=6.666;DP=435;FS=8.978;HRun=0;HaplotypeScore=61.3531;InbreedingCoeff=0.4884;MQ=53.81;MQ0=12;MQRankSum=-1.403;QD=5.25;ReadPosRankSum=-2.349;VQSLOD=0.5448;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:14:11.65:98,12,0	0/0:5,0:5:14.80:0,15,107	0/1:18,0:3:12.01:12,0,36	0/1:22,0:4:8.51:9,0,13	0/0:22,0:22:44.37:0,44,589	0/1:18,0:18:18.97:19,0,358	0/1:22,0:21:7.61:8,0,326	1/1:12,0:8:23.86:182,24,0	0/0:14,0:14:10.93:0,11,270	0/0:19,0:19:55.18:0,55,631	0/0:10,0:9:13.10:0,13,228	0/0:17,0:17:34.58:0,35,373	0/0:8,0:8:14.93:0,15,123	0/0:6,0:6:0.38:0,0,46	1/1:13,0:13:32.80:254,33,0	0/0:20,0:20:52.68:0,53,460	1/1:1,21:22:5.82:63,6,0	1/1:10,0:10:21.67:144,22,0	0/0:9,0:9:15.04:0,15,156	0/1:22,0:22:26.84:27,0,356	0/1:32,0:32:14.90:15,0,421	0/0:15,0:15:8.86:0,9,236	0/0:17,0:16:15.18:0,15,347	0/0:27,0:27:33.56:0,34,561	1/1:8,0:8:20.89:164,21,0	1/1:19,0:19:35.27:297,35,0	1/1:6,0:6:3.84:20,4,0	1/1:8,0:8:23.78:178,24,0
chr10	4394833	.	ATG	A	112.20	PASS	AB=0.947;AC=13;AF=0.250;AN=52;BaseQRankSum=3.323;DP=435;FS=2.064;HRun=0;HaplotypeScore=66.7550;InbreedingCoeff=0.0635;MQ=53.70;MQ0=13;MQRankSum=0.182;QD=0.66;ReadPosRankSum=1.943;VQSLOD=1.5723;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:14,0:14:0:0,0,0	0/0:5,0:5:9.03:0,9,119	0/0:16,0:3:3.90:0,4,46	0/0:23,0:5:2.98:0,3,21	0/0:22,0:22:33.06:0,33,456	0/1:19,0:19:40.09:40,0,441	0/1:23,1:23:31.23:31,0,342	./.	0/0:13,0:13:18.02:0,18,203	0/0:18,0:18:33.11:0,33,503	0/0:10,0:9:15.04:0,15,221	0/0:17,0:17:24.17:0,24,305	0/0:4,0:8:3:0,3,26	0/0:7,0:7:2.97:0,3,21	0/0:15,0:14:0.13:0,0,20	0/0:20,0:20:27.09:0,27,394	1/1:22,0:22:2.84:21,3,0	0/0:11,0:11:3.91:0,4,22	0/1:8,1:9:27.90:28,0,40	0/1:20,0:20:1.09:1,0,233	0/0:32,0:32:1.97:0,2,303	0/0:15,0:15:14.94:0,15,190	0/0:12,3:14:21.07:0,21,305	0/1:21,6:27:40.43:40,0,414	./.	0/1:19,1:20:31.20:57,0,31	1/1:6,0:6:2.75:13,3,0	1/1:8,0:8:2.37:8,2,0
chr10	4394962	.	G	GC	832.28	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.026;DP=625;FS=0.831;HRun=1;HaplotypeScore=63.9219;InbreedingCoeff=0.9994;MQ=80.47;MQ0=0;MQRankSum=-1.724;QD=34.68;ReadPosRankSum=-5.396;VQSLOD=1.7525;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:78.25:0,78,1010	0/0:14,0:14:42.14:0,42,545	0/0:15,0:15:35.47:0,35,425	0/0:19,0:19:45.52:0,46,517	0/0:29,0:29:84.27:0,84,1091	0/0:15,0:15:42.14:0,42,544	0/0:14,0:14:42.14:0,42,545	1/1:3,21:23:66.20:927,66,0	0/0:23,0:23:63.20:0,63,817	0/0:25,0:25:69.22:0,69,885	0/0:26,0:26:69.22:0,69,895	0/0:25,0:25:72.23:0,72,935	0/0:16,0:16:48.16:0,48,623	0/0:20,0:20:54.16:0,54,684	0/0:35,0:35:99:0,102,1309	0/0:37,0:37:99:0,111,1425	0/0:19,0:19:57.19:0,57,740	0/0:18,0:18:51.17:0,51,662	0/0:14,0:14:42.12:0,42,530	0/0:20,0:20:60.17:0,60,761	0/0:42,0:42:99:0,120,1543	0/0:27,0:27:72.23:0,72,929	0/0:15,0:15:45.13:0,45,570	0/0:20,0:20:57.19:0,57,740	0/0:17,0:17:48.16:0,48,623	0/0:28,0:28:84.26:0,84,1077	0/0:29,0:29:78.24:0,78,996	0/0:12,0:12:33.11:0,33,428
chr10	4396131	.	T	TGTGC	786.37	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.728;DP=719;FS=2.903;HRun=0;HaplotypeScore=132.9751;InbreedingCoeff=0.9866;MQ=56.43;MQ0=11;MQRankSum=-2.424;QD=29.12;ReadPosRankSum=-3.863;VQSLOD=3.0898;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:93.76:0,94,1689	0/0:6,0:6:18.06:0,18,333	0/0:42,0:21:40.77:0,41,460	0/0:45,0:26:48.05:0,48,860	0/0:28,0:28:66.12:0,66,991	0/0:25,0:25:72.13:0,72,1092	0/0:32,0:32:84.21:0,84,1406	1/1:20,6:27:55.04:881,55,0	0/0:11,0:11:25.29:0,25,363	0/0:25,0:25:72.17:0,72,1066	0/0:11,0:11:30.09:0,30,526	0/0:21,0:21:57.13:0,57,906	0/0:14,0:14:42.12:0,42,702	0/0:23,0:23:63.16:0,63,1043	0/0:13,0:13:36.08:0,36,577	0/0:11,0:11:27.06:0,27,440	0/0:41,0:41:99:0,105,1729	0/0:35,0:34:93.14:0,93,1438	0/0:18,0:18:48.07:0,48,656	0/0:15,0:15:45.13:0,45,753	0/0:103,0:102:99:0,291,4550	0/0:11,0:10:23.88:0,24,312	0/0:14,0:14:39.12:0,39,694	0/0:30,0:30:75.18:0,75,1249	0/0:22,0:22:57.15:0,57,959	0/0:26,0:26:75.11:0,75,1098	0/0:13,0:13:39.12:0,39,691	0/0:14,0:14:38.92:0,39,617
chr10	4396163	.	C	CGTGT	1473.17	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=0.655;DP=725;FS=7.268;HRun=0;HaplotypeScore=134.1688;InbreedingCoeff=0.6323;MQ=56.82;MQ0=7;MQRankSum=-5.342;QD=18.65;ReadPosRankSum=-4.556;VQSLOD=1.8250;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:80.58:0,81,1279	0/0:8,0:8:21.07:0,21,360	0/0:41,0:18:28.57:0,29,449	0/1:45,0:24:13.90:14,0,489	0/0:18,0:18:41.87:0,42,692	0/0:22,0:22:60.16:0,60,997	0/0:31,0:31:77.77:0,78,1196	1/1:9,19:33:74.79:1564,75,0	0/0:15,0:15:33.09:0,33,538	0/0:25,0:25:69.23:0,69,1169	0/0:17,0:17:45.14:0,45,744	0/0:27,0:27:44.24:0,44,1076	0/0:12,0:12:33.11:0,33,561	0/0:28,0:29:77.02:0,77,1278	0/0:12,0:12:27.08:0,27,436	0/0:15,0:15:42.14:0,42,720	0/0:35,0:35:99:0,99,1601	0/0:33,0:32:50.79:0,51,1281	0/0:16,0:15:29.99:0,30,439	0/0:19,0:19:48.15:0,48,797	0/0:94,0:96:99:0,239,3955	0/0:11,0:10:27.09:0,27,463	0/0:17,0:17:33.11:0,33,566	0/0:30,0:32:69.18:0,69,1092	0/0:20,0:20:54.18:0,54,923	0/0:28,0:28:75.25:0,75,1257	0/0:12,0:13:30.10:0,30,489	0/0:14,0:16:10.16:0,10,577
chr10	4399032	.	T	TACAAACAA	7028.83	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-3.820;DP=721;FS=1.011;HRun=0;HaplotypeScore=175.3165;InbreedingCoeff=0.9323;MQ=63.79;MQ0=2;MQRankSum=-12.072;QD=45.06;ReadPosRankSum=-2.218;VQSLOD=4.0453;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,26:42:56:2112,56,0	0/0:8,0:8:18.06:0,18,429	0/0:29,0:20:24.04:0,24,484	0/0:22,0:20:21:0,21,412	0/0:27,0:27:63.20:0,63,1533	0/0:22,0:22:48.16:0,48,1193	0/0:33,0:33:69.22:0,69,1591	1/1:31,0:31:33.11:574,33,0	0/0:27,0:27:63.09:0,63,1559	0/0:23,0:23:50.29:0,50,1184	0/0:24,0:24:51.17:0,51,1249	0/0:31,0:31:78.24:0,78,1836	0/0:39,0:39:99:0,99,2328	0/0:25,0:25:72.16:0,72,1554	1/1:11,22:33:39.46:1620,39,0	0/0:35,0:35:84.26:0,84,1960	0/0:23,0:24:49.58:0,50,1065	1/1:7,5:16:6.02:249,6,0	0/0:19,0:20:36.07:0,36,652	0/0:25,0:25:57.18:0,57,1349	0/0:34,0:34:72.25:0,72,1769	0/0:13,0:13:30.10:0,30,760	0/0:20,0:20:36.12:0,36,883	0/0:25,0:25:41.17:0,41,1194	1/1:8,23:34:60.21:2474,60,0	0/0:9,0:28:54.18:0,54,994	0/0:4,0:27:41.03:0,41,732	0/0:3,0:4:3.01:0,3,48
chr10	4402145	.	CATATATATATATATATATAT	C	1857.40	PASS	AB=0.861;AC=11;AF=0.344;AN=32;BaseQRankSum=2.755;DP=149;FS=13.948;HRun=0;HaplotypeScore=72.3286;InbreedingCoeff=0.2914;MQ=82.39;MQ0=10;MQRankSum=-3.126;QD=38.70;ReadPosRankSum=3.155;VQSLOD=0.8779;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:6:0:0,0,0	./.	./.	0/0:19,0:7:2.74:0,3,12	0/0:4,0:4:3:0,3,25	0/0:1,0:3:3.01:0,3,165	0/1:4,0:4:0:0,0,0	0/0:21,0:19:27.09:0,27,814	0/0:3,0:4:6.02:0,6,241	./.	0/0:3,0:4:3.01:0,3,223	./.	./.	./.	1/1:5,0:5:3.01:54,3,0	0/0:3,0:3:3.01:0,3,75	1/1:4,0:3:1.25:3,1,0	0/1:11,0:10:65.97:116,0,66	./.	./.	./.	./.	./.	./.	0/0:3,0:3:3.01:0,3,52	0/1:2,3:7:6.36:430,0,6	1/1:4,8:14:18.06:876,18,0	1/1:0,3:3:9.03:485,9,0
chr10	4402167	.	TATATATATATATATATACAC	T	1824.84	PASS	AB=1.000;AC=11;AF=0.324;AN=34;BaseQRankSum=2.467;DP=99;FS=5.324;HRun=0;HaplotypeScore=72.5050;InbreedingCoeff=0.1648;MQ=55.45;MQ0=10;MQRankSum=-1.342;QD=28.07;ReadPosRankSum=1.497;VQSLOD=1.3926;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:3,0:3:0:0,0,0	./.	0/0:3,0:1:0:0,0,0	0/0:13,0:3:2.28:0,2,9	0/0:1,0:1:3.01:0,3,256	0/0:3,0:3:3.01:0,3,150	./.	0/1:19,0:17:99:217,0,438	0/0:2,0:2:6.02:0,6,201	./.	0/0:1,0:1:3.01:0,3,232	./.	./.	./.	1/1:0,5:5:3.01:90,3,0	0/0:1,0:1:3:0,3,25	0/0:4,0:3:1.25:0,1,3	1/1:10,0:9:14.53:277,15,0	0/0:2,0:1:3.01:0,3,214	./.	./.	./.	./.	./.	1/1:3,0:3:3.01:48,3,0	0/1:9,0:9:99:293,0,182	0/1:15,0:15:99:639,0,159	1/1:3,0:3:9.03:371,9,0
chr10	4402177	.	TATATATACAC	T	972.18	PASS	AB=0.900;AC=15;AF=0.500;AN=30;BaseQRankSum=3.583;DP=95;FS=1.629;HRun=0;HaplotypeScore=58.9171;InbreedingCoeff=0.1816;MQ=44.52;MQ0=7;MQRankSum=-0.572;QD=12.46;ReadPosRankSum=1.488;VQSLOD=1.6649;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:0,0:3:0:0,0,0	./.	./.	./.	0/0:1,0:1:3.01:0,3,136	0/0:3,0:3:3.01:0,3,62	./.	1/1:5,13:16:14.71:456,15,0	0/0:2,0:2:2.92:0,3,17	./.	0/0:1,0:1:3.01:0,3,103	./.	./.	./.	1/1:5,0:5:1.55:4,2,0	./.	1/1:8,0:7:3.01:47,3,0	0/1:9,0:7:10.69:129,0,11	0/0:2,0:2:6.02:0,6,122	./.	0/1:1,0:1:0:0,0,0	./.	./.	./.	1/1:2,0:2:6.02:98,6,0	0/1:12,0:12:87.05:87,0,309	0/1:17,0:17:99:159,0,216	1/1:3,0:3:9.02:98,9,0
chr10	4402678	.	G	GTCACAGTTGTGTGCCACCAAGCCT	2540.43	PASS	AB=0.735;AC=22;AF=0.917;AN=24;BaseQRankSum=-2.281;DP=56;FS=0.000;HRun=0;HaplotypeScore=37.8369;InbreedingCoeff=-0.2226;MQ=122.28;MQ0=0;MQRankSum=-1.162;QD=74.72;ReadPosRankSum=-0.387;VQSLOD=2.2101;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/1:3,1:7:16.23:1164,0,16	0/1:4,0:5:10.44:437,0,10	./.	1/1:2,0:2:5.97:46,6,0	1/1:2,0:2:3.01:40,3,0	1/1:5,0:5:9.02:127,9,0	1/1:1,0:1:3:25,3,0	1/1:2,0:2:6.02:146,6,0	./.	./.	./.	./.	./.	./.	./.	1/1:1,0:1:3.01:55,3,0	./.	1/1:2,0:2:6.02:214,6,0	1/1:4,0:4:9.03:218,9,0	1/1:1,0:1:3.01:51,3,0	./.	./.	./.	1/1:2,0:2:3.01:103,3,0	./.	./.
chr10	4403538	.	CGTGTGTGTGTGTGT	C	4223.28	PASS	AB=0.806;AC=12;AF=0.222;AN=54;BaseQRankSum=9.007;DP=573;FS=67.336;HRun=0;HaplotypeScore=248.6545;InbreedingCoeff=0.7210;MQ=41.44;MQ0=11;MQRankSum=-9.208;QD=29.95;ReadPosRankSum=4.273;VQSLOD=2.0071;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,21:28:15.05:581,15,0	0/0:8,0:9:21.07:0,21,1110	0/0:27,0:10:3.01:0,3,120	0/0:25,0:7:6.02:0,6,153	0/0:11,0:12:24.08:0,24,1331	0/0:14,0:14:21.07:0,21,1247	0/0:26,0:31:57.20:0,57,3239	0/0:22,0:22:21.03:0,21,437	0/0:16,0:18:36.12:0,36,2028	0/0:28,0:33:87.30:0,87,4408	0/0:11,0:10:18.06:0,18,1020	0/0:19,0:21:48.16:0,48,2897	0/0:21,0:22:45.15:0,45,2394	0/0:29,0:31:66.23:0,66,3984	1/1:3,0:25:33.11:998,33,0	0/0:28,0:28:51.65:0,52,3004	0/1:14,0:25:30.32:30,0,159	0/1:10,0:11:50.70:90,0,51	0/0:13,0:10:18.06:0,18,704	0/0:15,0:17:30.10:0,30,1797	0/0:28,0:33:63.08:0,63,3522	0/0:7,0:15:15.05:0,15,598	0/0:14,0:16:17.12:0,17,1056	0/0:27,0:32:60.16:0,60,3051	1/1:5,0:21:24.08:744,24,0	1/1:6,9:15:27.09:1073,27,0	1/1:5,9:14:18.06:707,18,0	./.
chr10	4404351	.	GC	G	302.93	PASS	AB=0.889;AC=3;AF=0.058;AN=52;BaseQRankSum=1.126;DP=307;FS=1.165;HRun=4;HaplotypeScore=41.9951;InbreedingCoeff=0.3546;MQ=40.90;MQ0=57;MQRankSum=2.763;QD=8.66;ReadPosRankSum=2.506;VQSLOD=0.2359;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:8:15.01:0,15,187	0/0:8,0:8:18.05:0,18,228	./.	0/0:3,0:1:3.01:0,3,42	0/0:7,0:7:12.02:0,12,148	./.	0/0:30,0:24:54.17:0,54,734	0/0:12,0:9:18.04:0,18,190	0/0:4,0:2:6.02:0,6,84	0/0:18,0:17:45.08:0,45,575	0/0:7,0:7:3:0,3,29	0/0:12,0:10:21.07:0,21,292	0/0:11,0:8:18.02:0,18,229	0/0:7,0:5:9.03:0,9,126	0/0:6,0:5:15.05:0,15,205	0/0:7,0:7:6.02:0,6,84	1/1:1,18:15:33.10:395,33,0	0/1:14,2:12:2.79:3,0,386	0/0:8,0:6:18.06:0,18,246	0/0:3,0:3:6.02:0,6,84	0/0:43,0:29:59.62:0,60,816	0/0:13,0:13:21.06:0,21,275	0/0:1,0:1:3.01:0,3,41	0/0:24,0:19:51.07:0,51,659	0/0:15,0:15:30.08:0,30,382	0/0:13,0:12:27.09:0,27,377	0/0:5,0:5:12.04:0,12,155	0/0:2,0:2:6.02:0,6,84
chr10	4405606	.	TATA	T	3863.67	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=12.657;DP=731;FS=2.576;HRun=0;HaplotypeScore=98.4263;InbreedingCoeff=0.9964;MQ=74.74;MQ0=0;MQRankSum=-0.655;QD=44.41;ReadPosRankSum=3.347;VQSLOD=5.5139;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:57.18:0,57,1214	0/0:7,0:7:18.06:0,18,415	0/0:16,0:16:45.09:0,45,801	0/0:10,0:10:24.05:0,24,447	0/0:38,0:38:99:0,108,2364	0/0:41,0:41:99:0,123,2693	0/0:25,0:25:72.23:0,72,1598	0/0:34,0:34:90.31:0,90,2044	0/0:21,0:21:60.21:0,60,1327	0/0:40,0:40:99:0,117,2645	0/0:26,0:26:78.27:0,78,1778	0/0:30,0:30:84.29:0,84,1937	0/0:19,0:19:54.19:0,54,1211	0/0:23,0:23:69.24:0,69,1546	0/0:19,0:19:57.20:0,57,1312	0/0:23,0:23:63.20:0,63,1372	0/0:20,0:20:60.18:0,60,1289	0/0:20,0:20:57.16:0,57,1249	0/0:24,0:24:72.20:0,72,1528	0/0:40,0:40:99:0,111,2558	0/0:18,0:18:51.18:0,51,1155	0/0:26,0:26:75.23:0,75,1623	0/0:38,0:38:99:0,111,2408	0/0:26,0:26:78.27:0,78,1779	0/0:40,0:40:99:0,117,2639	1/1:1,36:37:42.12:1643,42,0	1/1:2,32:34:87.30:1453,87,0	1/1:1,15:16:45.15:767,45,0
chr10	4406352	.	GATTT	G	909.23	PASS	AB=0.964;AC=22;AF=0.500;AN=44;BaseQRankSum=6.448;DP=255;FS=9.185;HRun=0;HaplotypeScore=48.0529;InbreedingCoeff=0.4626;MQ=55.49;MQ0=0;MQRankSum=-3.437;QD=5.54;ReadPosRankSum=2.308;VQSLOD=0.3194;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:17:9.01:84,9,0	0/0:5,0:5:3.01:0,3,70	./.	./.	0/1:12,1:13:25.32:25,0,400	0/0:11,0:11:9.03:0,9,211	1/1:2,2:4:6.02:93,6,0	1/1:26,0:28:3.37:18,3,0	0/0:5,0:5:3.01:0,3,70	./.	0/0:10,0:10:9.03:0,9,190	0/0:6,0:6:9.03:0,9,179	0/1:5,0:5:8.97:9,0,132	0/0:6,0:6:3.01:0,3,70	1/1:9,0:9:2.04:6,2,0	./.	1/1:18,0:17:8.99:76,9,0	1/1:10,0:13:12.12:93,12,0	0/0:13,0:12:12.03:0,12,222	./.	0/0:4,0:4:6.02:0,6,140	0/0:5,0:5:3.01:0,3,70	./.	0/0:2,0:2:3.01:0,3,70	1/1:9,0:11:6.01:56,6,0	1/1:8,1:9:3.01:46,3,0	1/1:9,3:12:9.03:139,9,0	1/1:4,13:17:27.09:417,27,0
chr10	4407749	.	T	TA	1204.62	PASS	AB=0.872;AC=10;AF=0.179;AN=56;BaseQRankSum=-5.692;DP=634;FS=0.494;HRun=12;HaplotypeScore=78.4231;InbreedingCoeff=0.5222;MQ=72.64;MQ0=0;MQRankSum=0.100;QD=7.53;ReadPosRankSum=-0.106;VQSLOD=2.4755;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,1:36:26.88:0,27,443	0/0:5,0:5:11.90:0,12,87	0/1:22,0:17:11:11,0,50	0/1:21,0:16:12.87:13,0,36	0/0:28,0:29:64.57:0,65,462	0/0:25,0:28:61.62:0,62,438	0/0:20,1:23:22.57:0,23,309	0/0:23,0:23:26.71:0,27,196	0/0:28,1:31:52.80:0,53,488	0/0:19,1:20:14.51:0,15,251	0/0:15,0:16:31.58:0,32,215	0/0:21,0:22:57.64:0,58,398	0/0:19,0:18:41.67:0,42,301	0/0:13,0:13:29.65:0,30,208	1/1:7,30:37:25.32:559,25,0	0/0:21,2:27:23.80:0,24,383	0/1:9,17:26:4.76:282,0,5	1/1:6,9:15:8.49:214,8,0	0/1:19,3:23:25.67:26,0,208	0/0:25,0:25:56.34:0,56,399	0/0:18,0:18:47.54:0,48,347	0/0:16,0:17:37.39:0,37,256	0/0:18,0:19:31.81:0,32,223	0/0:25,0:26:65.34:0,65,465	1/1:5,10:16:10.99:255,11,0	0/0:6,0:28:36.65:0,37,106	0/0:8,0:28:41.87:0,42,137	0/0:2,0:19:34.40:0,34,100
chr10	4407989	.	C	CTT	1532.08	PASS	AB=1.000;AC=18;AF=0.346;AN=52;BaseQRankSum=3.173;DP=531;FS=6.532;HRun=9;HaplotypeScore=85.1662;InbreedingCoeff=0.8648;MQ=35.41;MQ0=72;MQRankSum=-1.227;QD=7.26;ReadPosRankSum=-2.277;VQSLOD=-0.2753;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:19,1:28:29.22:142,29,0	0/1:5,0:4:0:0,0,0	./.	./.	0/0:22,0:20:8.69:0,9,142	0/0:15,0:11:20.61:0,21,222	0/0:18,0:17:32.91:0,33,351	0/0:29,0:26:38.73:0,39,382	0/0:19,0:17:26.69:0,27,283	0/0:24,0:21:17.75:0,18,343	0/0:21,0:17:20.83:0,21,214	0/0:17,0:17:10.27:0,10,152	0/0:17,0:14:26.30:0,26,286	0/0:22,0:20:33.68:0,34,370	1/1:18,7:21:35.03:415,35,0	0/0:25,0:22:19.69:0,20,363	1/1:18,0:22:20.78:71,21,0	1/1:18,6:16:17.50:213,18,0	0/0:25,0:22:36.03:0,36,382	0/0:10,0:10:11.97:0,12,127	0/0:12,0:11:11.99:0,12,127	0/0:14,0:14:19.76:0,20,220	0/1:15,0:13:1.12:1,0,141	0/0:24,0:15:26.05:0,26,285	1/1:13,1:14:12.99:99,13,0	1/1:21,6:28:21.03:295,21,0	1/1:19,6:23:37.99:445,38,0	1/1:6,3:6:5.94:40,6,0
chr10	4408518	.	G	GT	3046.66	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=9.619;DP=732;FS=5.424;HRun=5;HaplotypeScore=109.6999;InbreedingCoeff=0.9976;MQ=87.53;MQ0=0;MQRankSum=-3.862;QD=31.41;ReadPosRankSum=-1.613;VQSLOD=2.5513;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,129,1367	0/0:7,0:7:18.05:0,18,193	0/0:32,0:32:77.50:0,77,788	0/0:21,0:21:51.09:0,51,526	0/0:33,0:33:96.24:0,96,1032	0/0:24,0:24:69.17:0,69,742	0/0:27,0:27:78.20:0,78,838	1/1:6,31:37:93.28:1189,93,0	0/0:25,0:25:75.17:0,75,797	0/0:34,0:34:90.19:0,90,950	0/0:30,0:29:81.20:0,81,871	0/0:31,0:31:90.21:0,90,959	0/0:34,0:34:93.21:0,93,990	0/0:17,0:17:50.86:0,51,526	0/0:37,0:37:99:0,105,1119	0/0:22,0:22:60.15:0,60,645	0/0:33,0:32:96.20:0,96,1012	0/0:12,0:12:36.09:0,36,387	0/0:18,0:18:48.11:0,48,510	0/0:35,0:35:96.24:0,96,1031	0/0:20,0:20:60.11:0,60,627	0/0:25,0:25:72.18:0,72,774	0/0:19,0:19:41.85:0,42,451	0/0:31,0:31:78.19:0,78,838	0/0:23,0:23:66.14:0,66,692	1/1:2,21:23:36.93:815,37,0	1/1:2,22:24:60.19:783,60,0	1/1:3,10:13:34.63:420,35,0
chr10	4408628	.	CT	C	2368.09	PASS	AB=0.850;AC=11;AF=0.196;AN=56;BaseQRankSum=12.689;DP=658;FS=1.261;HRun=10;HaplotypeScore=81.1808;InbreedingCoeff=0.8840;MQ=75.17;MQ0=0;MQRankSum=-1.163;QD=18.08;ReadPosRankSum=2.676;VQSLOD=4.4102;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,23:30:68:579,68,0	0/0:11,0:11:27.06:0,27,291	0/0:28,0:28:13.75:0,14,533	0/1:14,3:17:15.70:16,0,268	0/0:33,0:33:75.17:0,75,804	0/0:18,0:20:50.96:0,51,538	0/0:20,0:20:54.15:0,54,597	0/0:31,2:33:23.09:0,23,710	0/0:28,0:30:81.05:0,81,877	0/0:25,0:25:57.14:0,57,622	0/0:13,0:13:36.08:0,36,389	0/0:17,0:17:22.66:0,23,472	0/0:35,0:35:99:0,99,1085	0/0:14,0:14:36.10:0,36,398	1/1:3,30:33:86.98:755,87,0	0/0:26,1:27:55.16:0,55,837	1/1:1,20:21:59.99:521,60,0	1/1:1,11:12:35.99:312,36,0	0/0:22,0:22:57.61:0,58,619	0/0:19,0:20:56.97:0,57,596	0/0:26,0:26:66.16:0,66,721	0/0:28,1:29:55.16:0,55,837	0/0:24,0:24:66.15:0,66,713	0/0:23,0:23:60.12:0,60,639	1/1:4,14:18:41.97:364,42,0	0/0:20,0:23:60.29:0,60,619	0/0:36,0:36:90.08:0,90,976	0/0:16,0:18:47.90:0,48,481
chr10	4410342	.	A	AGAACCCC	10107.59	PASS	AB=0.522;AC=11;AF=0.196;AN=56;BaseQRankSum=12.905;DP=723;FS=1.373;HRun=0;HaplotypeScore=165.4943;InbreedingCoeff=0.8914;MQ=87.94;MQ0=0;MQRankSum=-14.252;QD=106.40;ReadPosRankSum=4.306;VQSLOD=6.4097;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,135,3636	0/0:8,0:8:24.08:0,24,648	0/0:27,0:27:66.25:0,66,1813	0/0:28,0:28:68.03:0,68,1641	0/0:24,0:24:72.23:0,72,1921	0/0:24,0:24:72.25:0,72,2003	0/0:37,0:37:99:0,108,2889	0/0:35,0:35:99:0,102,2624	0/0:29,0:29:87.30:0,87,2353	0/0:33,0:33:99:0,99,2679	0/0:18,0:18:48.16:0,48,1341	0/0:32,0:32:96.32:0,96,2565	0/0:18,0:18:54.19:0,54,1442	0/0:30,0:30:90.31:0,90,2441	1/1:1,21:25:63.22:2569,63,0	0/0:40,0:40:99:0,120,3356	0/0:21,0:21:63.19:0,63,1588	1/1:0,7:7:18.06:739,18,0	0/0:21,0:21:63.22:0,63,1601	0/0:27,0:27:75.26:0,75,2046	0/0:53,0:53:99:0,160,4341	0/0:26,0:26:78.27:0,78,2112	0/0:17,0:17:48.16:0,48,1332	0/0:34,0:34:99:0,102,2771	1/1:0,15:15:42.14:1726,42,0	0/1:2,19:24:11.64:2650,0,12	1/1:0,13:15:39.13:1595,39,0	1/1:0,7:8:21.07:830,21,0
chr10	4410841	.	T	TGCGCGCGC	2225.05	PASS	AB=0.958;AC=13;AF=0.232;AN=56;BaseQRankSum=5.493;DP=552;FS=3.310;HRun=0;HaplotypeScore=147.9362;InbreedingCoeff=0.7962;MQ=64.47;MQ0=5;MQRankSum=-5.358;QD=15.78;ReadPosRankSum=-0.254;VQSLOD=2.6197;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:18,25:45:2.96:23,3,0	0/0:9,0:9:27.09:0,27,700	0/0:18,0:10:18.06:0,18,443	0/0:22,0:15:10.09:0,10,221	0/0:28,0:28:54.15:0,54,1298	0/0:25,0:25:57.18:0,57,1413	0/0:29,0:29:75.26:0,75,1984	0/0:20,0:20:42.07:0,42,1001	0/0:10,0:10:21.07:0,21,520	0/0:20,0:20:48.09:0,48,1189	0/0:14,0:14:33.11:0,33,855	0/0:20,0:20:51.18:0,51,1364	0/0:10,0:10:30.09:0,30,691	0/0:21,0:21:51.17:0,51,1352	1/1:14,0:14:6.02:231,6,0	0/0:17,0:17:39.13:0,39,980	0/1:22,0:23:2.59:365,0,3	1/1:17,2:19:24.08:968,24,0	0/0:18,0:18:51.15:0,51,1091	0/0:16,0:16:39.12:0,39,847	0/0:28,0:27:52.92:0,53,1615	0/0:18,0:18:42.13:0,42,1073	0/0:18,0:18:36.12:0,36,908	0/0:39,0:39:96.31:0,96,2373	0/0:11,0:11:0:0,0,0	1/1:6,0:23:36.79:567,37,0	1/1:3,0:12:8.82:173,9,0	1/1:0,0:4:3.01:66,3,0
chr10	4410848	.	GCA	G	569.53	PASS	AB=0.857;AC=14;AF=0.269;AN=52;BaseQRankSum=4.181;DP=580;FS=3.922;HRun=0;HaplotypeScore=91.0121;InbreedingCoeff=-0.2560;MQ=58.17;MQ0=7;MQRankSum=0.370;QD=2.09;ReadPosRankSum=0.801;VQSLOD=1.1512;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:41:11.58:0,12,85	0/1:9,1:10:18.88:19,0,107	./.	./.	0/1:22,6:28:65.71:66,0,279	0/1:20,3:23:20.72:21,0,511	0/1:28,1:28:11.88:12,0,225	0/0:20,0:20:8.84:0,9,56	0/1:10,0:10:39.87:40,0,173	0/1:18,7:25:95.80:96,0,227	0/1:11,0:14:47.97:48,0,159	0/0:23,1:24:9.06:0,9,423	0/1:10,1:12:29.04:29,0,108	0/0:21,0:21:11.44:0,11,350	0/0:7,0:21:11.74:0,12,88	0/1:13,7:20:68.81:69,0,238	1/1:14,0:22:8.05:72,8,0	0/0:4,0:19:18.01:0,18,168	0/0:20,0:20:18:0,18,210	0/1:17,0:18:75.32:75,0,184	0/0:33,2:34:18.09:0,18,538	0/0:20,0:20:30.03:0,30,365	0/1:12,4:17:61.91:62,0,117	0/1:34,9:43:99:110,0,575	0/0:5,0:21:2.51:0,3,12	0/0:20,0:20:2.07:0,2,172	0/0:9,0:9:11.89:0,12,105	0/0:4,0:4:3.01:0,3,32
chr10	4411283	.	T	TGTGC	188.35	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=6.294;DP=621;FS=4.712;HRun=0;HaplotypeScore=151.9828;InbreedingCoeff=0.5169;MQ=67.13;MQ0=5;MQRankSum=-4.489;QD=3.30;ReadPosRankSum=-3.977;VQSLOD=1.1403;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:39.09:0,39,622	0/0:6,0:6:9.50:0,10,171	0/0:26,0:18:38.22:0,38,620	0/0:14,0:11:4.92:0,5,77	0/0:24,0:23:57.20:0,57,1061	0/0:23,0:23:60.16:0,60,1026	0/0:24,0:23:35.29:0,35,946	0/0:37,0:37:99:0,102,1747	0/0:25,0:25:66.04:0,66,1150	0/0:22,0:22:66.18:0,66,1171	0/0:12,0:12:33.11:0,33,614	0/0:24,0:24:49.56:0,50,905	0/0:24,0:24:57.13:0,57,982	0/0:18,0:18:36.29:0,36,651	0/0:37,0:36:53.03:0,53,777	0/0:31,0:31:78.17:0,78,1358	1/1:5,21:26:12.11:182,12,0	0/0:15,0:15:15.25:0,15,316	0/0:13,0:13:27.05:0,27,442	0/0:14,0:13:26.40:0,26,466	0/0:39,0:39:96.79:0,97,1747	0/0:21,0:21:57.67:0,58,1043	0/0:13,0:13:39.12:0,39,687	0/0:24,0:24:59.70:0,60,1059	0/0:32,0:32:52.53:0,53,581	0/1:31,0:31:99:106,0,746	0/0:13,0:13:24:0,24,296	0/0:9,0:8:8.60:0,9,328
chr10	4411289	.	CGT	C	232.68	PASS	AB=1.000;AC=7;AF=0.130;AN=54;BaseQRankSum=-0.027;DP=624;FS=0.676;HRun=0;HaplotypeScore=115.5253;InbreedingCoeff=0.1341;MQ=59.27;MQ0=8;MQRankSum=1.367;QD=1.48;ReadPosRankSum=-3.530;VQSLOD=0.9175;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:11.97:0,12,96	0/0:5,0:5:8.86:0,9,79	0/0:17,0:12:2.99:0,3,23	./.	0/1:27,0:26:0.96:1,0,273	0/0:25,0:25:40.40:0,40,312	0/1:24,0:23:18.81:19,0,150	1/1:20,13:33:41.53:301,42,0	0/1:24,0:24:21.13:21,0,250	0/0:25,0:25:18.74:0,19,241	0/0:16,0:16:14.96:0,15,119	0/0:27,0:26:0.59:0,1,178	0/0:24,0:24:10.33:0,10,233	0/0:20,0:19:11.34:0,11,262	0/0:34,0:33:45.72:0,46,350	0/1:32,0:32:5.69:6,0,445	0/0:22,0:22:5.83:0,6,53	0/0:15,0:15:20.83:0,21,149	0/0:11,0:11:11.18:0,11,82	0/1:17,0:15:0.53:1,0,79	0/0:40,0:39:34.14:0,34,406	0/0:22,0:22:18.48:0,18,182	0/0:13,0:13:14.84:0,15,131	0/0:28,0:27:18.82:0,19,268	0/0:33,0:33:44.90:0,45,370	0/0:34,0:34:54.76:0,55,434	0/0:13,0:13:11.94:0,12,97	0/0:9,0:8:3:0,3,25
chr10	4411324	.	GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAA	G	257.03	PASS	AB=1.000;AC=4;AF=0.077;AN=52;BaseQRankSum=3.082;DP=472;FS=9.186;HRun=0;HaplotypeScore=307.9071;InbreedingCoeff=0.1905;MQ=44.11;MQ0=19;MQRankSum=-2.866;QD=3.95;ReadPosRankSum=0.069;VQSLOD=0.9680;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:15:2.36:0,2,6	0/0:2,0:2:3.48:0,3,113	./.	./.	0/0:19,0:17:9.97:0,10,457	0/0:19,0:19:15.22:0,15,737	0/0:13,0:12:7.27:0,7,465	0/0:21,0:20:29.84:0,30,1072	0/0:18,0:18:28.45:0,28,1675	0/0:21,0:21:31.35:0,31,2685	0/1:11,0:11:7.54:8,0,390	0/0:25,0:24:40.64:0,41,2144	0/0:20,0:20:29.25:0,29,2160	0/0:21,0:19:31.05:0,31,2282	0/0:21,9:29:7.42:0,7,57	0/0:36,0:36:54.97:0,55,3367	0/0:19,0:17:19.07:0,19,894	0/0:8,0:8:2.99:0,3,24	0/0:7,0:6:7.74:0,8,343	0/0:16,0:14:10.51:0,11,197	0/0:29,0:28:13.46:0,13,943	0/0:16,0:16:9.92:0,10,759	0/0:15,0:12:15.94:0,16,1452	0/0:22,0:20:27.56:0,28,2909	1/1:28,0:26:0.87:14,1,0	0/1:26,0:26:99:326,0,963	0/0:9,0:9:0.22:0,0,0	0/0:3,0:2:3.01:0,3,31
chr10	4411326	.	GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAA	G	300.25	PASS	AB=1.000;AC=3;AF=0.060;AN=50;BaseQRankSum=2.944;DP=467;FS=9.078;HRun=0;HaplotypeScore=288.0920;InbreedingCoeff=0.2482;MQ=43.91;MQ0=21;MQRankSum=-1.965;QD=5.46;ReadPosRankSum=0.934;VQSLOD=1.0624;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:15:2.36:0,2,6	0/0:2,0:2:3.48:0,3,87	./.	./.	0/0:19,0:16:9.97:0,10,381	0/0:19,0:19:14.94:0,15,637	0/0:13,0:12:4.26:0,4,401	0/0:21,0:20:32.68:0,33,899	0/0:17,0:17:21.96:0,22,1400	0/0:21,0:21:31.35:0,31,2438	0/0:11,0:11:1.70:0,2,367	0/0:25,0:24:34.74:0,35,2049	0/0:20,0:20:26.69:0,27,1993	0/0:22,0:20:34.06:0,34,2301	0/0:29,0:28:1.41:0,1,4	0/0:35,0:35:51.47:0,51,2973	0/0:19,0:17:18.15:0,18,800	./.	0/0:7,0:6:6.96:0,7,266	0/0:14,0:12:6.61:0,7,128	0/0:29,0:28:13.45:0,13,841	0/0:16,0:16:9.92:0,10,688	0/0:15,0:12:15.94:0,16,1325	0/0:21,0:19:27.56:0,28,2687	1/1:21,7:26:0.35:14,0,0	0/1:27,0:26:99:370,0,753	0/0:8,0:8:0.47:0,0,1	0/0:3,0:2:2.37:0,2,8
chr10	4411541	.	TCATAC	T	3017.46	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=7.180;DP=811;FS=5.970;HRun=0;HaplotypeScore=151.8111;InbreedingCoeff=0.5920;MQ=67.07;MQ0=10;MQRankSum=0.236;QD=19.98;ReadPosRankSum=-1.014;VQSLOD=2.7352;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:69.11:0,69,1562	0/0:14,0:14:42.05:0,42,827	0/0:46,0:23:41.49:0,41,455	0/0:69,0:34:20.57:0,21,483	0/0:31,0:31:48.88:0,49,2054	0/0:25,0:25:34.80:0,35,1350	0/0:22,0:22:60.08:0,60,1311	0/0:34,0:34:98.99:0,99,1205	0/0:39,0:39:99:0,108,2293	0/0:24,0:24:69.15:0,69,1413	0/0:28,0:28:81.04:0,81,1527	0/0:28,0:28:81.07:0,81,1752	0/0:26,0:26:72.12:0,72,1744	0/0:25,0:25:69.21:0,69,1915	0/1:37,0:37:99:126,0,720	0/0:39,0:39:99:0,108,2452	0/0:17,0:17:48.13:0,48,1256	0/1:7,0:7:64.93:65,0,95	0/0:21,0:20:59.87:0,60,1074	0/0:34,0:34:99:0,99,2336	0/0:31,0:31:90.10:0,90,1765	0/0:39,0:39:99:0,111,2274	0/0:27,0:27:78.05:0,78,1493	0/0:18,0:18:48.08:0,48,1054	0/1:30,0:30:99:331,0,389	1/1:1,34:35:99:1587,102,0	1/1:2,24:26:39.13:815,39,0	1/1:0,16:16:12.04:251,12,0
chr10	4415997	.	C	CTT	6808.17	PASS	AB=0.528;AC=11;AF=0.196;AN=56;BaseQRankSum=-14.728;DP=818;FS=18.632;HRun=1;HaplotypeScore=91.4654;InbreedingCoeff=0.8919;MQ=87.99;MQ0=1;MQRankSum=-2.449;QD=44.21;ReadPosRankSum=4.292;VQSLOD=3.7845;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,138,1971	0/0:18,0:18:48.06:0,48,663	0/0:33,0:33:90.20:0,90,1234	0/0:25,0:25:63.02:0,63,846	0/0:34,0:34:93.25:0,93,1325	0/0:33,0:33:99:0,99,1424	0/0:33,0:33:87.27:0,87,1286	0/0:37,0:37:99:0,108,1516	0/0:22,0:22:66.17:0,66,941	0/0:18,0:18:51.16:0,51,730	0/0:18,0:18:54.14:0,54,761	0/0:30,0:30:90.26:0,90,1312	0/0:35,0:35:99:0,102,1485	0/0:42,0:42:99:0,120,1810	1/1:1,28:30:69.24:1333,69,0	0/0:25,0:25:75.24:0,75,1126	0/0:27,0:27:78.24:0,78,1169	1/1:0,19:19:51.11:912,51,0	0/0:22,0:22:63.19:0,63,941	0/0:31,0:31:93.30:0,93,1397	0/0:53,0:53:99:0,156,2280	0/0:26,0:26:69.22:0,69,1033	0/0:24,0:24:69.18:0,69,962	0/0:31,0:31:90.31:0,90,1369	1/1:0,29:30:69.24:1333,69,0	0/1:3,25:28:13.61:1258,0,14	1/1:1,26:27:63.17:1178,63,0	1/1:1,18:19:45.08:794,45,0
chr10	4416373	.	A	AT	4886.22	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=6.574;DP=579;FS=10.283;HRun=9;HaplotypeScore=66.7792;InbreedingCoeff=0.9777;MQ=70.56;MQ0=0;MQRankSum=-3.356;QD=24.93;ReadPosRankSum=-0.460;VQSLOD=4.9362;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,17:20:27.96:520,28,0	0/0:10,0:10:29.99:0,30,260	0/0:13,0:13:16.68:0,17,181	0/0:12,0:12:8.95:0,9,179	0/0:27,0:27:77.98:0,78,677	0/0:23,0:23:59.98:0,60,520	0/0:15,0:15:35.42:0,35,312	1/1:8,2:38:85.86:504,86,0	0/0:24,0:24:65.97:0,66,569	0/0:29,0:29:77.98:0,78,677	0/0:31,0:31:77.97:0,78,677	0/0:16,0:16:47.97:0,48,411	0/0:16,0:16:44.99:0,45,391	0/0:19,0:19:50.99:0,51,443	1/1:1,28:29:75.20:825,75,0	0/0:28,0:28:74.95:0,75,648	1/1:1,12:13:30.08:332,30,0	1/1:2,14:16:39.11:431,39,0	0/0:29,0:29:80.96:0,81,698	0/0:29,0:29:83.98:0,84,729	0/0:8,0:8:17.96:0,18,148	0/0:16,0:16:23.25:0,23,320	0/0:24,0:24:56.94:0,57,488	0/0:14,0:13:41.99:0,42,365	1/1:4,16:21:24.91:486,25,0	1/1:0,28:30:89.87:933,90,0	1/1:3,23:26:49.11:755,49,0	1/1:0,3:3:9.02:100,9,0
chr10	4416758	.	G	GC	8125.03	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-0.691;DP=611;FS=0.692;HRun=0;HaplotypeScore=70.6382;InbreedingCoeff=0.9991;MQ=76.10;MQ0=0;MQRankSum=-3.503;QD=42.10;ReadPosRankSum=1.597;VQSLOD=5.5057;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,35:35:99:1581,99,0	0/0:9,0:9:26.68:0,27,345	0/0:11,0:11:30.09:0,30,407	0/0:19,0:19:46.84:0,47,629	0/0:11,0:11:30.10:0,30,419	0/0:29,0:29:75.25:0,75,1048	0/0:21,0:21:60.20:0,60,839	0/0:17,0:17:48.15:0,48,656	0/0:17,0:17:51.16:0,51,696	0/0:30,0:30:87.28:0,87,1201	0/0:21,0:21:63.16:0,63,807	0/0:16,0:16:36.12:0,36,503	0/0:25,0:25:75.22:0,75,1029	0/0:32,0:32:93.28:0,93,1277	1/1:1,23:24:63.21:1003,63,0	0/0:17,0:17:51.17:0,51,713	1/1:1,35:36:93.32:1486,93,0	1/1:0,20:20:51.17:809,51,0	0/0:31,0:31:93.28:0,93,1267	0/0:22,0:22:60.19:0,60,821	0/0:38,0:38:99:0,114,1556	0/0:8,0:8:24.08:0,24,335	0/0:14,0:14:42.14:0,42,587	0/0:30,0:30:87.28:0,87,1200	1/1:1,17:18:42.14:671,42,0	1/1:0,22:22:63.21:995,63,0	1/1:0,27:27:72.25:1150,72,0	1/1:0,11:11:27.09:431,27,0
chr10	4417070	.	C	CT	327.19	PASS	AB=0.718;AC=8;AF=0.143;AN=56;BaseQRankSum=6.003;DP=328;FS=1.844;HRun=0;HaplotypeScore=46.2517;InbreedingCoeff=0.3841;MQ=62.81;MQ0=26;MQRankSum=0.169;QD=5.55;ReadPosRankSum=2.659;VQSLOD=3.3591;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:19:50.84:0,51,576	0/0:6,0:6:15.03:0,15,179	0/0:45,0:15:31.21:0,31,278	0/0:28,0:11:3.03:0,3,58	0/0:9,0:9:23.81:0,24,258	0/0:13,0:13:39.03:0,39,489	0/0:5,0:5:15.04:0,15,185	0/0:23,0:20:33.84:0,34,276	0/0:4,0:4:12.03:0,12,151	0/0:9,0:5:11.96:0,12,115	0/0:13,0:13:27.08:0,27,341	0/0:8,0:8:21.04:0,21,237	0/0:2,0:1:3.01:0,3,42	0/0:8,0:5:15.05:0,15,209	0/1:4,3:7:18.05:40,0,18	0/0:4,0:4:8.76:0,9,96	0/0:19,0:17:13.96:0,14,196	0/1:4,7:11:7.92:113,0,8	0/0:14,0:14:41.79:0,42,402	0/0:13,0:11:20.23:0,20,205	0/0:7,0:7:16.27:0,16,192	0/0:4,0:4:12:0,12,134	0/0:7,0:7:14.95:0,15,150	0/0:6,0:6:12.01:0,12,132	1/1:3,9:12:8.47:72,8,0	0/1:6,5:11:13.32:45,0,13	0/1:6,1:7:4.04:33,0,4	1/1:3,8:8:18.01:166,18,0
chr10	4417072	.	C	CT	890.09	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=3.466;DP=330;FS=2.420;HRun=11;HaplotypeScore=44.0289;InbreedingCoeff=0.7146;MQ=62.97;MQ0=25;MQRankSum=-1.327;QD=7.12;ReadPosRankSum=-0.839;VQSLOD=1.0329;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:21,0:19:10.54:102,0,11	0/0:6,0:6:14.89:0,15,107	0/0:46,0:15:25.60:0,26,188	0/0:28,0:11:6.32:0,6,55	0/0:12,0:12:17.79:0,18,130	0/0:12,0:13:31.88:0,32,234	0/0:5,0:5:11.95:0,12,91	1/1:15,9:21:7.37:189,7,0	0/0:4,0:4:11.34:0,11,78	0/0:8,0:4:11.93:0,12,88	0/0:10,0:13:16.96:0,17,120	0/0:7,0:8:11.42:0,11,75	0/0:3,0:3:5.96:0,6,44	0/0:8,0:5:8.95:0,9,69	1/1:7,0:7:0.91:51,1,0	0/0:4,0:4:5.96:0,6,46	1/1:18,0:16:6.54:109,7,0	1/1:11,0:11:12.42:145,12,0	0/0:14,0:14:26.15:0,26,178	0/0:12,0:10:11.28:0,11,75	0/0:7,0:7:14.30:0,14,98	0/0:3,0:3:5.97:0,6,46	0/0:6,0:6:11.88:0,12,85	0/0:5,0:5:8.95:0,9,68	1/1:11,0:12:12.44:108,12,0	1/1:12,0:12:19.10:128,19,0	1/1:4,0:8:10.20:68,10,0	1/1:11,0:8:18.03:176,18,0
chr10	4421161	.	T	TAA	2378.27	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=-3.323;DP=428;FS=8.733;HRun=12;HaplotypeScore=60.5802;InbreedingCoeff=0.8947;MQ=75.29;MQ0=1;MQRankSum=0.185;QD=19.99;ReadPosRankSum=0.760;VQSLOD=2.2304;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:22:44.70:0,45,400	0/0:6,0:6:11.95:0,12,111	0/0:21,0:14:7.84:0,8,108	0/1:12,0:9:0.33:0,0,39	0/0:27,0:27:50.76:0,51,471	0/0:18,0:18:35.97:0,36,328	0/0:3,0:3:9.01:0,9,83	0/0:19,0:20:38.68:0,39,341	0/0:10,0:11:26.67:0,27,228	0/0:15,0:17:38.49:0,38,329	0/0:17,0:18:53.80:0,54,484	0/0:11,0:12:20.84:0,21,241	0/0:9,0:9:24.03:0,24,222	0/0:13,0:14:32.71:0,33,289	1/1:2,10:13:17.55:219,18,0	0/0:13,0:13:29.97:0,30,278	0/0:20,0:20:42:0,42,388	1/1:4,18:22:48.14:654,48,0	0/0:15,0:16:35.93:0,36,378	0/0:22,0:22:32.60:0,33,290	0/0:5,0:5:9:0,9,83	0/0:10,0:10:14.96:0,15,139	0/0:13,0:13:27:0,27,250	0/0:10,0:11:26.76:0,27,234	1/1:5,8:14:23.56:294,24,0	1/1:5,14:22:49.80:601,50,0	1/1:5,19:25:45.14:608,45,0	1/1:4,6:10:15.02:185,15,0
chr10	4423188	.	T	TA	5772.23	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=9.933;DP=669;FS=0.687;HRun=7;HaplotypeScore=77.9544;InbreedingCoeff=0.9877;MQ=66.56;MQ0=2;MQRankSum=-2.010;QD=26.85;ReadPosRankSum=3.691;VQSLOD=5.4779;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,25:26:69.19:808,69,0	0/0:13,0:13:39.01:0,39,356	0/0:14,0:8:17.80:0,18,132	0/0:12,0:9:11.89:0,12,96	0/0:34,0:34:93.08:0,93,870	0/0:26,0:26:75.07:0,75,704	0/0:21,0:21:54.03:0,54,500	0/0:29,0:29:66.08:0,66,631	0/0:16,0:16:45.06:0,45,427	0/0:40,0:40:99:0,105,999	0/0:26,0:26:72.08:0,72,681	0/0:25,0:25:65.99:0,66,608	0/0:18,0:18:51.08:0,51,490	0/0:28,0:28:75.01:0,75,696	1/1:3,34:37:81.25:967,81,0	0/0:24,0:24:66.04:0,66,610	1/1:0,1:17:41.74:307,42,0	1/1:0,9:9:24.07:286,24,0	0/0:21,0:21:48.01:0,48,438	0/0:36,0:36:96.04:0,96,894	0/0:16,0:16:39.02:0,39,363	0/0:18,0:18:39.04:0,39,370	0/0:23,0:23:59.69:0,60,561	0/0:14,0:14:33.02:0,33,305	1/1:5,35:40:96.29:1146,96,0	1/1:10,37:47:70.75:1256,71,0	1/1:3,32:35:72.22:859,72,0	1/1:0,4:4:12.04:143,12,0
chr10	4423532	.	CCTTCCTTTCTTTCTTTCTTT	C	3855.01	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=2.772;DP=603;FS=1.301;HRun=0;HaplotypeScore=290.6438;InbreedingCoeff=0.6897;MQ=63.76;MQ0=11;MQRankSum=-1.148;QD=21.07;ReadPosRankSum=1.637;VQSLOD=1.8302;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:25:99:113,0,244	0/0:6,0:6:17.98:0,18,213	0/0:24,0:18:38.08:0,38,379	0/0:15,0:14:23.10:0,23,232	0/0:30,0:29:83.78:0,84,1661	0/1:15,0:15:26.33:26,0,1172	0/0:18,0:17:41.91:0,42,716	0/0:33,0:32:80.77:0,81,671	0/0:30,0:30:82.33:0,82,1673	0/0:27,0:26:75.16:0,75,2464	0/0:25,0:24:65.90:0,66,2186	0/0:16,0:15:45:0,45,898	0/0:16,0:15:45.04:0,45,821	0/0:21,0:19:57.11:0,57,1406	1/1:23,0:23:62.94:721,63,0	0/0:17,0:15:39.08:0,39,826	0/1:17,0:13:99:115,0,119	1/1:17,0:16:32.96:355,33,0	0/0:23,0:23:62.93:0,63,1148	0/0:27,0:27:75.07:0,75,1755	0/0:23,0:23:65.98:0,66,1080	0/0:15,0:15:27:0,27,384	0/0:27,0:27:65.74:0,66,1672	0/0:27,0:26:68.97:0,69,1726	1/1:19,0:19:47.97:548,48,0	1/1:17,13:30:21.95:1204,22,0	1/1:22,0:22:62.86:681,63,0	1/1:2,0:13:3.01:91,3,0
chr10	4423536	.	CCTTTCTTT	C	403.95	PASS	AB=1.000;AC=21;AF=0.404;AN=52;BaseQRankSum=6.068;DP=588;FS=3.226;HRun=0;HaplotypeScore=158.0613;InbreedingCoeff=0.6172;MQ=57.27;MQ0=14;MQRankSum=-2.934;QD=1.91;ReadPosRankSum=2.274;VQSLOD=2.7565;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:23:5.98:54,6,0	1/1:6,0:6:3:25,3,0	./.	./.	0/0:30,0:29:11.06:0,11,55	0/0:17,0:17:16.82:0,17,297	0/0:18,0:15:12.04:0,12,165	0/0:31,0:30:0:0,0,0	0/1:33,0:31:39.59:40,0,66	0/0:29,0:27:39.13:0,39,830	0/0:25,0:23:39.13:0,39,712	0/0:17,0:16:2.96:0,3,7	0/0:15,0:14:9.27:0,9,45	0/0:20,0:18:16.62:0,17,99	1/1:20,0:20:6.02:80,6,0	0/0:15,0:13:11.25:0,11,69	1/1:17,0:13:12.62:99,13,0	1/1:17,0:16:0.89:2,1,0	0/0:22,0:21:8.14:0,8,60	0/0:30,0:29:17.85:0,18,117	0/0:22,0:22:9.29:0,9,68	1/1:9,5:14:2.94:18,3,0	0/0:24,0:24:30.01:0,30,421	0/0:29,0:28:16.18:0,16,133	1/1:17,0:17:2.94:18,3,0	1/1:30,0:30:20.81:163,21,0	1/1:21,0:21:2.92:17,3,0	1/1:13,0:12:3.01:55,3,0
chr10	4424128	.	GTTA	G	732.75	PASS	AB=0.981;AC=19;AF=0.475;AN=40;BaseQRankSum=0.032;DP=337;FS=0.000;HRun=0;HaplotypeScore=63.6821;InbreedingCoeff=-0.3856;MQ=28.98;MQ0=15;MQRankSum=-1.767;QD=2.75;ReadPosRankSum=-6.448;VQSLOD=-0.2185;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:13,0:7:9.83:36,0,10	0/1:4,0:4:25.98:26,0,51	0/0:25,0:2:3.01:0,3,49	0/0:19,0:2:5.92:0,6,41	0/1:5,0:5:0.88:9,0,1	1/1:3,0:3:2.97:20,3,0	0/1:19,1:18:99:142,0,122	1/1:2,0:1:3.01:33,3,0	0/1:30,0:29:47.47:47,0,206	0/0:15,0:9:11.78:0,12,34	./.	0/1:15,1:15:17.69:18,0,91	0/1:18,1:15:18.25:18,0,204	0/1:22,1:22:99:152,0,198	./.	0/1:25,0:23:65.98:66,0,172	0/1:18,0:18:42.95:43,0,92	./.	./.	0/1:7,0:6:35.06:35,0,37	1/1:34,1:21:8.25:120,8,0	0/1:7,0:6:6.12:9,0,6	0/0:5,0:4:1.68:0,2,5	0/1:37,2:39:83.78:84,0,324	./.	./.	./.	./.
chr10	4424129	.	TTAC	T	237.10	PASS	AB=0.961;AC=13;AF=0.325;AN=40;BaseQRankSum=2.300;DP=342;FS=3.338;HRun=0;HaplotypeScore=67.1526;InbreedingCoeff=-0.2156;MQ=29.03;MQ0=16;MQRankSum=-1.675;QD=1.11;ReadPosRankSum=-3.016;VQSLOD=0.4163;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:11,2:7:33.35:33,0,61	0/1:4,0:4:5.02:5,0,76	0/0:25,0:2:3.01:0,3,58	0/0:21,0:3:6.02:0,6,66	0/0:5,0:5:4.63:0,5,29	1/1:1,2:3:3.01:38,3,0	0/1:19,1:18:79.86:80,0,194	1/1:2,0:1:2.97:20,3,0	0/1:27,3:29:17.06:17,0,302	0/0:14,0:9:17.99:0,18,156	./.	0/0:17,0:16:7.75:0,8,167	0/0:19,0:16:6.07:0,6,294	0/1:23,0:22:89.35:89,0,215	./.	0/1:26,0:24:8.13:8,0,296	0/1:18,0:18:25.50:25,0,207	./.	./.	0/0:8,0:6:6.09:0,6,71	0/1:32,3:21:24.87:26,0,25	0/0:7,0:6:10.85:0,11,58	0/0:5,0:4:5.42:0,5,25	0/1:39,0:39:18.94:19,0,448	./.	./.	./.	./.
chr10	4424225	.	CTGA	C	154.54	PASS	AB=0.991;AC=13;AF=0.325;AN=40;BaseQRankSum=-1.310;DP=951;FS=0.550;HRun=0;HaplotypeScore=182.3792;InbreedingCoeff=0.0056;MQ=40.21;MQ0=102;MQRankSum=-1.214;QD=0.32;ReadPosRankSum=-10.697;VQSLOD=-0.1380;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:10:2.04:2,0,41	0/1:16,1:10:57.29:61,0,57	0/1:44,0:4:2.20:2,0,42	0/0:41,0:14:30.23:0,30,295	./.	0/0:18,0:10:8.51:0,9,96	0/1:71,0:33:43.93:44,0,212	0/0:24,0:4:9.03:0,9,116	0/0:73,0:59:43.29:0,43,1434	0/0:32,0:12:26.43:0,26,294	0/1:8,0:6:0:0,0,0	0/0:72,0:51:53.42:0,53,1200	0/0:81,3:58:31.92:0,32,1340	0/1:78,0:58:2.91:3,0,1293	./.	0/0:88,0:75:99:0,114,2146	0/1:35,0:29:21.15:21,0,462	./.	./.	1/1:14,0:10:2.98:22,3,0	0/1:88,1:62:31.08:31,0,713	0/0:13,0:8:6.02:0,6,75	1/1:10,0:8:4.79:26,5,0	0/1:94,0:73:63.57:64,0,1194	./.	./.	./.	./.
chr10	4424304	.	TGTC	T	80.78	PASS	AB=0.962;AC=6;AF=0.231;AN=26;BaseQRankSum=0.810;DP=231;FS=14.413;HRun=0;HaplotypeScore=85.9769;InbreedingCoeff=-0.0538;MQ=43.66;MQ0=22;MQRankSum=1.576;QD=0.88;ReadPosRankSum=-4.150;VQSLOD=-0.7133;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:16,0:2:0.15:0,0,38	0/1:22,1:5:82.74:83,0,123	./.	0/0:2,0:1:3.01:0,3,33	0/1:16,1:12:11.30:11,0,206	0/0:3,0:1:3.01:0,3,42	0/0:20,0:17:26.25:0,26,289	./.	./.	0/0:32,0:28:47.28:0,47,571	0/0:13,0:11:20.55:0,21,237	0/0:22,0:19:8.33:0,8,261	./.	0/0:22,0:19:29.13:0,29,377	1/1:1,1:2:3.01:50,3,0	./.	./.	./.	0/1:16,1:9:0.76:1,0,76	./.	./.	0/1:33,0:23:29.03:29,0,248	./.	./.	./.	./.
chr10	4424621	.	TTGC	T	522.36	PASS	AB=0.877;AC=8;AF=0.154;AN=52;BaseQRankSum=6.935;DP=981;FS=55.846;HRun=0;HaplotypeScore=115.5013;InbreedingCoeff=0.2746;MQ=43.27;MQ0=93;MQRankSum=-6.369;QD=6.29;ReadPosRankSum=-0.461;VQSLOD=0.1856;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	0/0:10,0:6:8.99:0,9,141	0/0:24,0:4:6.02:0,6,123	0/0:47,0:13:37.63:0,38,514	0/0:8,0:6:3.01:0,3,51	0/0:24,0:16:23.87:0,24,367	0/0:67,0:54:99:0,111,1836	0/0:24,0:8:24.08:0,24,469	0/0:57,1:57:73.15:0,73,2483	0/0:44,0:35:57.16:0,57,1023	0/0:17,0:11:9.03:0,9,174	0/0:78,0:72:99:0,172,3190	0/0:46,0:42:99:0,99,1791	0/0:61,0:53:99:0,123,2360	1/1:1,11:11:21.03:244,21,0	0/0:58,0:58:99:0,108,2031	0/1:26,0:17:21.51:22,0,289	0/1:7,1:7:30.14:30,0,30	0/0:21,0:9:24.03:0,24,352	0/0:26,0:21:39.13:0,39,688	0/0:127,0:87:99:0,113,1926	0/0:26,0:17:17.62:0,18,346	0/0:11,0:7:6.02:0,6,95	0/0:99,0:87:99:0,183,3327	1/1:4,1:5:2.92:18,3,0	0/1:14,0:7:15.85:30,0,16	0/1:7,11:17:13.26:313,0,13	./.
chr10	4424651	.	TTGC	T	313.03	PASS	AB=0.905;AC=6;AF=0.111;AN=54;BaseQRankSum=8.043;DP=1085;FS=71.280;HRun=0;HaplotypeScore=131.1244;InbreedingCoeff=0.5226;MQ=42.22;MQ0=108;MQRankSum=-6.834;QD=6.52;ReadPosRankSum=2.061;VQSLOD=-0.3083;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:14:3:0,3,25	0/0:14,0:12:24.01:0,24,464	0/0:26,0:5:15.01:0,15,203	0/0:44,0:15:34.95:0,35,628	0/0:11,0:8:21.07:0,21,462	0/0:29,0:22:39.13:0,39,780	0/0:62,0:48:99:0,141,2966	0/0:39,0:9:17.90:0,18,266	0/0:54,0:53:99:0,138,2788	0/0:52,0:37:96.20:0,96,1797	0/0:27,0:22:41.83:0,42,650	0/0:75,0:70:99:0,196,4114	0/0:60,0:53:99:0,132,2767	0/0:69,0:58:99:0,150,3081	1/1:10,6:14:27.57:225,28,0	0/0:54,0:53:99:0,141,2905	0/0:44,0:34:65.47:0,65,1180	1/1:7,0:6:2.84:14,3,0	0/0:24,0:9:24.08:0,24,519	0/0:34,0:27:59.83:0,60,1052	0/0:143,0:91:99:0,199,3550	0/0:26,0:21:32.89:0,33,513	0/0:18,0:13:23.96:0,24,417	0/0:95,1:85:99:0,220,4696	0/1:8,0:7:5.58:13,0,6	0/0:13,0:8:6.01:0,6,60	0/1:13,4:16:63.76:183,0,64	./.
chr10	4424660	.	TTGC	T	290.12	PASS	AB=0.846;AC=7;AF=0.130;AN=54;BaseQRankSum=7.011;DP=1051;FS=53.429;HRun=0;HaplotypeScore=127.2752;InbreedingCoeff=0.4532;MQ=42.30;MQ0=107;MQRankSum=-6.290;QD=4.76;ReadPosRankSum=1.429;VQSLOD=0.6531;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:14:23.81:0,24,256	0/0:14,0:12:25.31:0,25,480	0/0:16,0:2:5.75:0,6,80	0/0:32,0:11:24.01:0,24,361	0/0:11,0:8:21.07:0,21,478	0/0:27,0:21:41.94:0,42,729	0/0:69,0:56:99:0,159,3026	0/0:36,0:5:2.75:0,3,46	0/0:48,0:44:99:0,120,2513	0/0:47,0:32:83.57:0,84,1327	0/0:26,0:22:38.89:0,39,720	0/0:77,0:72:99:0,181,3873	0/0:59,0:52:99:0,141,2955	0/0:65,0:55:99:0,150,3109	0/1:10,5:14:11.14:132,0,11	0/0:56,0:53:99:0,141,2841	0/0:45,0:35:58.59:0,59,1273	1/1:3,3:5:3.01:36,3,0	0/0:25,0:10:27.07:0,27,521	0/0:31,0:27:45.85:0,46,1032	0/0:142,0:91:99:0,200,3675	0/0:28,0:23:32.53:0,33,526	0/0:17,0:12:23.91:0,24,443	0/0:96,0:84:99:0,214,4553	1/1:9,0:8:5.84:34,6,0	0/1:16,0:7:0:0,0,0	0/1:11,4:14:23.11:204,0,23	./.
chr10	4424669	.	T	TTGC	839.74	PASS	AB=0.899;AC=3;AF=0.056;AN=54;BaseQRankSum=6.462;DP=1021;FS=5.698;HRun=0;HaplotypeScore=137.8567;InbreedingCoeff=0.0601;MQ=42.99;MQ0=103;MQRankSum=-2.400;QD=12.72;ReadPosRankSum=1.205;VQSLOD=2.9061;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:14:30.01:0,30,394	0/0:13,0:11:20.86:0,21,336	0/0:10,0:1:3:0,3,29	0/0:14,0:5:9.03:0,9,133	0/0:13,0:12:24.04:0,24,355	0/0:29,0:23:36.04:0,36,515	0/0:63,0:52:99:0,138,1941	0/0:42,0:3:3.01:0,3,45	0/0:48,0:45:99:0,107,1718	0/0:41,0:28:27.59:0,28,773	0/0:23,0:20:35.93:0,36,486	0/0:76,0:72:99:0,183,2635	0/0:62,0:53:99:0,138,2109	0/0:68,0:59:99:0,150,2163	0/0:16,0:14:5.64:0,6,108	0/0:56,0:53:99:0,138,2064	0/1:25,19:36:99:904,0,383	0/1:6,0:4:2.10:4,0,2	0/0:24,0:10:21.06:0,21,316	0/0:27,0:24:61.52:0,62,826	0/0:134,0:92:99:0,191,2762	0/0:25,0:23:32.38:0,32,404	0/0:16,0:12:24.05:0,24,353	0/0:98,0:87:99:0,220,3244	0/0:10,0:8:5.50:0,6,41	0/0:18,0:9:8.92:0,9,81	0/1:15,0:14:22.16:22,0,68	./.
chr10	4424705	.	TTGTTGCTGC	T	320.94	PASS	AB=0.897;AC=3;AF=0.054;AN=56;BaseQRankSum=8.082;DP=970;FS=25.443;HRun=0;HaplotypeScore=204.2814;InbreedingCoeff=-0.0097;MQ=44.57;MQ0=80;MQRankSum=-5.031;QD=3.57;ReadPosRankSum=-3.253;VQSLOD=0.7751;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:33:53.52:0,54,1023	0/0:13,0:12:29.95:0,30,479	0/0:17,0:3:9.02:0,9,174	0/0:16,0:3:9.03:0,9,157	0/0:23,0:18:33.10:0,33,575	0/0:27,0:24:24:0,24,594	0/0:54,0:44:99:0,120,2472	0/1:21,17:16:8.33:369,0,8	0/0:51,0:47:99:0,123,3067	0/0:48,0:37:99:0,105,2259	0/0:14,0:14:17.94:0,18,204	0/0:62,0:56:99:0,139,3746	0/0:60,0:50:99:0,132,3290	0/0:59,0:54:99:0,105,3073	0/0:13,0:10:7.48:0,7,36	0/0:60,0:55:99:0,147,4177	0/1:45,0:41:39.13:39,0,721	0/0:6,0:4:2.90:0,3,16	0/0:30,0:16:23.30:0,23,708	0/0:22,0:20:38.97:0,39,656	0/0:103,0:81:99:0,182,4026	0/0:24,0:22:35.94:0,36,675	0/0:14,0:11:17.91:0,18,290	0/0:98,0:85:99:0,220,6163	0/0:3,0:1:3:0,3,28	0/0:17,0:7:2.05:0,2,62	0/1:6,0:5:3.21:3,0,17	0/0:3,0:2:2.90:0,3,16
chr10	4424755	.	G	GTTA	199.65	PASS	AB=0.857;AC=2;AF=0.037;AN=54;BaseQRankSum=4.349;DP=810;FS=14.558;HRun=0;HaplotypeScore=103.7425;InbreedingCoeff=0.0101;MQ=44.50;MQ0=70;MQRankSum=-3.533;QD=4.75;ReadPosRankSum=2.028;VQSLOD=1.4107;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:18:32.99:0,33,484	0/0:7,0:6:6.02:0,6,112	0/0:14,0:2:6.02:0,6,107	0/0:18,0:4:10.94:0,11,101	0/0:16,0:11:12.04:0,12,218	0/0:23,0:17:24.08:0,24,440	0/0:60,0:41:99:0,120,1993	0/0:33,0:21:60.16:0,60,959	0/0:44,0:41:99:0,109,1864	0/0:43,0:32:89.67:0,90,1449	0/0:11,0:10:3.01:0,3,55	0/0:60,0:55:99:0,152,2604	0/0:52,0:46:99:0,138,2303	0/0:40,0:39:99:0,103,1710	0/0:18,0:16:20.97:0,21,225	0/0:57,0:56:99:0,153,2664	0/1:32,0:26:86.81:87,0,364	./.	0/0:17,0:8:0.92:0,1,227	0/0:13,0:12:9.03:0,9,165	0/0:75,0:60:99:0,142,2267	0/0:13,0:11:15.05:0,15,270	0/0:16,0:13:12.04:0,12,199	0/0:85,0:76:99:0,212,3561	0/0:5,0:3:1.25:0,1,3	0/0:13,0:5:9.01:0,9,126	0/1:6,4:8:58.19:200,0,58	0/0:2,0:2:2.97:0,3,20
chr10	4424786	.	C	CTGT	333.45	PASS	AB=0.917;AC=6;AF=0.111;AN=54;BaseQRankSum=5.458;DP=641;FS=18.173;HRun=0;HaplotypeScore=102.8356;InbreedingCoeff=0.4408;MQ=46.49;MQ0=53;MQRankSum=-5.523;QD=6.54;ReadPosRankSum=0.531;VQSLOD=0.9623;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:15:14.78:0,15,228	0/0:8,0:8:8.99:0,9,98	0/0:7,0:1:2.98:0,3,21	0/0:15,0:1:3:0,3,29	0/0:8,0:4:3:0,3,27	0/0:13,0:11:6.01:0,6,63	0/0:52,0:38:99:0,108,1445	0/0:24,0:13:26.76:0,27,246	0/0:44,0:41:99:0,102,1331	0/0:30,0:14:20.90:0,21,164	0/0:6,0:5:5.94:0,6,67	0/0:54,0:50:99:0,144,1926	0/0:45,0:42:99:0,115,1597	0/0:34,0:33:86.52:0,87,1250	0/1:11,11:22:7.85:200,0,8	0/0:43,0:42:99:0,111,1642	0/0:27,0:23:35.50:0,35,523	0/1:3,0:2:0:0,0,0	0/0:13,0:5:11.92:0,12,89	0/0:5,0:3:5.93:0,6,40	0/0:58,0:49:99:0,105,1331	0/1:8,0:5:0:0,0,0	0/1:5,0:4:0:0,0,0	0/0:69,1:67:99:0,152,2190	./.	0/0:8,0:3:0:0,0,0	1/1:8,5:12:12.19:230,12,0	0/0:1,0:1:1.82:0,2,5
chr10	4425678	.	C	CACAG	3096.80	PASS	AB=0.586;AC=5;AF=0.089;AN=56;BaseQRankSum=5.796;DP=530;FS=0.583;HRun=0;HaplotypeScore=98.7400;InbreedingCoeff=0.7692;MQ=83.20;MQ0=0;MQRankSum=-3.715;QD=50.77;ReadPosRankSum=3.343;VQSLOD=4.3588;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:78.27:0,78,1401	0/0:7,0:7:21.07:0,21,377	0/0:26,0:26:62.78:0,63,1026	0/0:22,0:22:41.71:0,42,709	0/0:23,0:23:57.18:0,57,987	0/0:16,0:16:39.13:0,39,694	0/0:21,0:20:51.16:0,51,867	0/0:25,0:25:63.22:0,63,1112	0/0:17,0:17:42.13:0,42,719	0/0:19,0:19:45.15:0,45,809	0/0:14,0:14:42.14:0,42,755	0/0:9,0:9:15.05:0,15,270	0/0:22,0:22:51.63:0,52,876	0/0:11,0:11:27.09:0,27,485	0/0:21,0:21:54.15:0,54,911	0/0:13,0:13:30.09:0,30,509	0/0:21,0:21:54.19:0,54,970	0/0:14,0:14:33.11:0,33,593	0/0:25,0:25:72.25:0,72,1291	0/0:15,0:15:39.13:0,39,691	0/0:15,0:15:39.13:0,39,691	0/0:20,0:20:51.16:0,51,876	0/0:27,0:27:72.25:0,72,1294	0/0:12,0:12:30.10:0,30,532	0/0:21,0:21:60.19:0,60,1045	0/1:10,23:34:26.62:1747,0,27	1/1:6,15:21:39.13:1011,39,0	1/1:0,6:6:18.06:467,18,0
chr10	4427833	.	AT	A	423.77	PASS	AB=0.830;AC=8;AF=0.143;AN=56;BaseQRankSum=2.851;DP=533;FS=2.396;HRun=16;HaplotypeScore=93.5357;InbreedingCoeff=0.3806;MQ=65.78;MQ0=1;MQRankSum=2.093;QD=3.36;ReadPosRankSum=3.046;VQSLOD=0.6333;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,1:29:36.63:122,37,0	0/0:7,0:7:14.90:0,15,115	0/0:17,0:9:13.93:0,14,76	0/0:17,0:12:10.60:0,11,63	0/0:38,1:41:53.36:0,53,496	0/0:21,1:24:32.61:0,33,348	0/1:9,2:13:18.20:18,0,72	0/1:12,12:25:12.99:108,0,13	0/0:16,0:16:24.78:0,25,189	0/0:27,1:31:26.49:0,26,297	0/0:22,2:24:21.37:0,21,230	0/0:23,0:23:10.91:0,11,178	0/0:11,0:11:20.93:0,21,167	0/0:17,0:20:19.90:0,20,160	0/0:11,0:11:17.65:0,18,129	0/0:10,1:11:20.89:0,21,161	1/1:8,13:21:36.66:288,37,0	0/0:21,0:19:35.90:0,36,292	0/1:14,3:17:24.17:24,0,120	0/0:19,0:19:30.26:0,30,274	0/0:14,0:13:26.74:0,27,197	0/0:15,1:17:20.66:0,21,256	0/0:16,0:15:23.67:0,24,174	0/1:19,1:20:7.66:8,0,146	0/0:14,1:15:7:0,7,108	0/0:24,1:25:49.79:0,50,363	0/0:16,2:18:6.03:0,6,146	0/0:5,0:4:11.95:0,12,94
chr10	4427937	.	AT	A	584.48	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=2.281;DP=638;FS=0.565;HRun=14;HaplotypeScore=86.8759;InbreedingCoeff=0.7506;MQ=55.00;MQ0=32;MQRankSum=0.716;QD=8.23;ReadPosRankSum=2.429;VQSLOD=3.0923;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,33:43:53.85:438,54,0	0/0:7,0:8:17.81:0,18,145	0/0:33,0:7:19.23:0,19,159	0/0:36,0:9:0.20:0,0,55	0/0:32,2:37:33.29:0,33,516	0/0:25,1:23:36.88:0,37,449	0/0:13,0:14:23.01:0,23,224	0/0:21,0:21:48.04:0,48,442	0/0:14,2:16:29.90:0,30,265	0/0:28,3:31:4.10:0,4,437	0/0:23,1:23:19.04:0,19,286	0/0:17,0:16:26.93:0,27,233	0/0:11,0:11:29.32:0,29,246	0/0:16,0:19:33.59:0,34,277	0/0:4,0:17:22.52:0,23,114	0/0:17,0:17:33.94:0,34,298	1/1:7,20:27:38.61:267,39,0	0/0:6,0:21:28.41:0,28,143	0/0:19,1:19:22.30:0,22,299	0/0:34,1:36:21.20:0,21,498	0/0:13,1:12:20.92:0,21,183	0/0:14,1:13:3.45:0,3,171	0/0:17,0:17:37.38:0,37,309	0/0:24,0:23:60.07:0,60,557	0/0:5,0:23:30.74:0,31,154	0/0:12,0:22:36.56:0,37,192	0/0:7,0:25:31.39:0,31,165	0/0:5,0:14:20.70:0,21,118
chr10	4429378	.	AGG	A	3116.51	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=1.062;DP=448;FS=4.681;HRun=11;HaplotypeScore=69.0296;InbreedingCoeff=0.9684;MQ=75.48;MQ0=2;MQRankSum=-0.569;QD=25.55;ReadPosRankSum=5.479;VQSLOD=3.7107;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:29:48.17:0,48,196	0/0:11,0:11:21.05:0,21,300	0/0:16,0:13:26.91:0,27,308	0/0:16,0:17:24.95:0,25,216	0/0:12,0:12:15.01:0,15,160	0/0:16,0:18:22.40:0,22,357	0/0:13,0:16:35.09:0,35,477	0/0:14,0:14:24.03:0,24,287	0/0:20,0:20:42.13:0,42,619	0/0:16,0:16:18.05:0,18,257	0/0:16,0:18:31.55:0,32,360	0/0:11,0:12:25.72:0,26,285	0/0:16,0:18:36.85:0,37,417	0/0:7,0:7:18.06:0,18,271	1/1:8,22:30:77.79:788,78,0	0/0:20,0:21:41.26:0,41,585	1/1:4,23:26:75.14:785,75,0	1/1:0,8:8:24.06:255,24,0	0/0:18,0:19:34.98:0,35,385	0/0:10,0:10:17.14:0,17,207	0/0:11,0:11:18.05:0,18,253	0/0:7,0:7:6.02:0,6,92	0/0:10,0:10:21.01:0,21,275	0/0:23,0:24:50.13:0,50,686	1/1:2,13:15:33.08:351,33,0	1/1:3,10:13:33.07:351,33,0	1/1:0,15:15:45.05:465,45,0	1/1:4,10:13:30.06:319,30,0
chr10	4429721	.	A	AT	1185.94	PASS	AB=0.941;AC=37;AF=0.685;AN=54;BaseQRankSum=-1.919;DP=272;FS=4.854;HRun=2;HaplotypeScore=142.6802;InbreedingCoeff=0.3179;MQ=45.73;MQ0=3;MQRankSum=1.758;QD=5.34;ReadPosRankSum=0.610;VQSLOD=0.6326;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:9,1:11:8.94:43,0,9	1/1:3,1:5:7.19:51,7,0	0/0:4,0:2:3.01:0,3,31	0/0:6,0:4:5.60:0,6,43	0/1:9,0:9:2.26:9,0,2	1/1:14,0:14:20.68:92,21,0	1/1:4,0:4:6.15:35,6,0	1/1:25,0:24:21.87:131,22,0	1/1:7,0:7:10.41:78,10,0	1/1:13,0:13:22.64:126,23,0	1/1:5,0:5:4.84:31,5,0	1/1:5,1:6:12.34:88,12,0	1/1:1,0:2:5.40:25,5,0	1/1:2,0:2:2.94:34,3,0	0/0:12,0:11:24.41:0,24,128	1/1:5,0:5:3.51:19,4,0	1/1:14,4:21:23.83:180,24,0	0/0:7,0:7:10.45:0,10,53	1/1:10,0:10:2.97:104,3,0	1/1:4,0:4:2.48:13,2,0	0/0:1,0:1:2.84:0,3,14	./.	1/1:3,0:3:1.06:13,1,0	1/1:2,0:2:4.90:18,5,0	0/0:20,0:20:51.70:0,52,269	0/1:27,2:29:31.24:113,0,31	0/1:33,2:35:48.41:108,0,48	0/1:8,1:9:9.72:39,0,10
chr10	4432750	.	T	TA	4725.29	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-13.446;DP=662;FS=5.259;HRun=5;HaplotypeScore=61.9296;InbreedingCoeff=0.9783;MQ=84.61;MQ0=0;MQRankSum=-1.563;QD=36.92;ReadPosRankSum=3.155;VQSLOD=4.4532;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,105,1258	0/0:12,0:12:36.11:0,36,432	0/0:24,0:25:63.25:0,63,692	0/0:15,0:15:39.07:0,39,428	0/0:28,0:28:81.24:0,81,961	0/0:33,0:33:99:0,99,1187	0/0:10,0:10:30.09:0,30,360	0/0:32,0:32:93.27:0,93,1096	0/0:29,0:29:87.25:0,87,1030	0/0:32,0:32:93.29:0,93,1116	0/0:25,0:25:75.20:0,75,876	0/0:29,0:29:84.24:0,84,990	0/0:19,0:19:54.17:0,54,646	0/0:21,0:21:63.19:0,63,756	1/1:1,35:36:92.98:1302,93,0	0/0:27,0:27:81.22:0,81,949	0/0:36,0:36:99:0,108,1295	1/1:1,13:14:33.11:462,33,0	0/0:19,0:18:51.16:0,51,612	0/0:25,0:25:63.19:0,63,755	0/0:17,0:17:51.16:0,51,609	0/0:24,0:24:72.21:0,72,852	0/0:22,0:22:63.19:0,63,756	0/0:16,0:16:45.14:0,45,540	1/1:0,15:15:39.13:546,39,0	1/1:1,30:31:90.28:1240,90,0	1/1:2,27:29:78.26:1091,78,0	1/1:0,2:2:6.02:84,6,0
chr10	4433048	.	T	TC	8029.62	PASS	AB=0.571;AC=17;AF=0.304;AN=56;BaseQRankSum=-15.038;DP=662;FS=4.711;HRun=3;HaplotypeScore=58.0811;InbreedingCoeff=0.9133;MQ=74.68;MQ0=0;MQRankSum=-1.417;QD=36.33;ReadPosRankSum=2.542;VQSLOD=5.5399;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,34:33:87.29:1253,87,0	0/0:10,0:10:27.08:0,27,324	0/0:25,0:24:69.20:0,69,823	0/0:22,0:22:57.18:0,57,699	0/0:29,0:29:81.23:0,81,981	0/0:22,0:22:66.18:0,66,793	0/0:21,0:21:57.17:0,57,695	1/1:5,31:36:90.25:1215,90,0	0/0:30,0:30:90.28:0,90,1115	0/0:38,0:38:99:0,108,1319	0/0:27,0:27:81.24:0,81,986	0/0:15,0:15:45.14:0,45,557	0/0:23,0:23:69.20:0,69,841	0/0:26,0:26:72.22:0,72,881	1/1:1,24:25:63.21:907,63,0	0/0:22,0:22:63.18:0,63,757	1/1:1,23:24:63.21:907,63,0	1/1:0,15:15:45.15:648,45,0	0/0:18,0:18:51.16:0,51,632	0/0:19,0:19:57.16:0,57,683	0/0:28,0:28:75.23:0,75,929	0/0:23,0:23:69.20:0,69,841	0/0:17,0:17:51.16:0,51,632	0/0:26,0:26:75.24:0,75,929	1/1:3,21:25:63.21:900,63,0	0/1:5,15:20:22.05:539,0,22	1/1:1,36:36:99:1462,102,0	1/1:1,4:5:15.04:199,15,0
chr10	4433587	.	A	AAAGAGGAGG	1865.10	PASS	AB=0.586;AC=11;AF=0.196;AN=56;BaseQRankSum=6.400;DP=518;FS=0.677;HRun=0;HaplotypeScore=140.9762;InbreedingCoeff=0.8220;MQ=73.83;MQ0=0;MQRankSum=-3.362;QD=30.08;ReadPosRankSum=-2.984;VQSLOD=2.9889;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:24:69.08:0,69,1658	0/0:7,0:7:21.06:0,21,552	0/0:30,0:27:52.62:0,53,1189	0/0:16,0:16:48.02:0,48,902	0/0:24,0:24:72.21:0,72,2014	0/0:19,0:19:57.13:0,57,1407	0/0:19,0:19:54.12:0,54,1229	0/0:38,0:38:99:0,108,2336	0/0:20,0:20:57.15:0,57,1478	0/0:22,0:22:66.20:0,66,1746	0/0:15,0:15:45.13:0,45,1241	0/0:27,0:27:78.22:0,78,1810	0/0:26,0:26:78.19:0,78,1963	0/0:16,0:16:45.14:0,45,1306	1/1:11,0:10:23.98:239,24,0	0/0:27,0:27:81.22:0,81,2093	0/0:14,0:13:6.41:0,6,175	1/1:5,0:5:12.01:216,12,0	0/0:23,0:23:69.18:0,69,1582	0/0:15,0:15:45.14:0,45,1331	0/0:20,0:20:60.06:0,60,1284	0/0:9,0:9:27.07:0,27,680	0/0:15,0:15:45.12:0,45,1148	0/0:30,0:30:87.21:0,87,2058	1/1:3,0:10:12.04:406,12,0	0/1:5,0:17:99:485,0,113	1/1:2,7:13:5.82:247,6,0	1/1:5,0:5:15.05:441,15,0
chr10	4436154	.	A	AATGGCATCTTTG	24090.65	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-4.375;DP=662;FS=5.276;HRun=0;HaplotypeScore=217.2704;InbreedingCoeff=0.9984;MQ=90.06;MQ0=0;MQRankSum=-17.731;QD=148.71;ReadPosRankSum=1.687;VQSLOD=4.8172;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:75.26:0,75,2568	0/0:15,0:15:42.14:0,42,1508	0/0:32,0:32:74.77:0,75,2485	0/0:30,0:30:78.67:0,79,2252	0/0:31,0:31:84.29:0,84,3008	0/0:28,0:28:75.24:0,75,2539	0/0:15,0:15:42.14:0,42,1551	0/0:34,0:34:96.31:0,96,3184	0/0:24,0:24:69.22:0,69,2261	0/0:33,0:33:99:0,99,3286	0/0:16,0:16:48.16:0,48,1729	0/0:18,0:18:42.12:0,42,1420	0/0:22,0:22:63.20:0,63,2111	0/0:19,0:19:51.16:0,51,1804	1/1:9,14:25:60.21:3361,60,0	0/0:16,0:16:48.16:0,48,1706	1/1:3,7:11:27.09:1486,27,0	1/1:6,4:10:20.93:1097,21,0	0/0:18,0:18:54.19:0,54,1869	0/0:32,0:32:93.31:0,93,3193	0/0:28,0:28:72.21:0,72,2312	0/0:22,0:22:57.20:0,57,1864	0/0:19,0:19:54.19:0,54,1924	0/0:20,0:20:60.21:0,60,2015	1/1:10,28:39:99:6060,111,0	1/1:14,19:35:21.89:5136,22,0	1/1:10,16:27:75.26:4371,75,0	1/1:5,10:15:45.15:2579,45,0
chr10	4436819	.	CTT	C	1145.64	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.407;DP=801;FS=0.728;HRun=3;HaplotypeScore=92.7224;InbreedingCoeff=0.9999;MQ=75.46;MQ0=0;MQRankSum=-0.788;QD=38.19;ReadPosRankSum=2.090;VQSLOD=3.2665;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,154,2949	0/0:15,0:15:45.15:0,45,870	0/0:24,0:24:72.25:0,72,1294	0/0:19,0:19:54.08:0,54,924	0/0:29,0:29:87.30:0,87,1680	0/0:26,0:26:78.25:0,78,1444	0/0:25,0:25:75.26:0,75,1427	0/0:36,0:36:99:0,102,1870	0/0:26,0:26:75.26:0,75,1442	0/0:38,0:38:99:0,111,2135	0/0:18,0:18:54.19:0,54,1044	0/0:35,0:35:99:0,105,2016	0/0:28,0:28:84.25:0,84,1570	0/0:25,0:25:75.26:0,75,1428	0/0:43,0:43:99:0,126,2416	0/0:26,0:26:78.27:0,78,1507	1/1:0,30:30:81.28:1241,81,0	0/0:22,0:22:66.18:0,66,1210	0/0:23,0:23:69.21:0,69,1281	0/0:38,0:38:99:0,114,2159	0/0:37,0:37:99:0,105,2021	0/0:31,0:31:90.31:0,90,1739	0/0:33,0:33:96.33:0,96,1830	0/0:30,0:30:90.31:0,90,1715	0/0:19,0:19:57.19:0,57,1064	0/0:36,0:36:99:0,108,2068	0/0:24,0:24:69.22:0,69,1299	0/0:13,0:13:39.13:0,39,753
chr10	4436984	.	CAG	C	2114.47	PASS	AB=0.843;AC=11;AF=0.196;AN=56;BaseQRankSum=8.884;DP=815;FS=5.617;HRun=0;HaplotypeScore=124.0049;InbreedingCoeff=0.3982;MQ=82.68;MQ0=4;MQRankSum=1.911;QD=10.73;ReadPosRankSum=0.951;VQSLOD=2.7109;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:94.42:0,94,1814	0/0:20,0:20:46.26:0,46,672	0/0:53,0:38:33.28:0,33,424	0/1:70,1:50:24.33:24,0,295	0/0:26,0:26:23.56:0,24,808	0/1:13,2:15:43.20:43,0,356	0/0:35,0:35:47.56:0,48,1177	0/0:39,0:39:65.18:0,65,1135	0/0:24,0:24:51.14:0,51,766	0/0:38,0:38:87.29:0,87,1337	0/1:9,2:11:46.23:46,0,284	0/0:40,1:41:56.65:0,57,1388	0/0:36,0:36:83.50:0,83,1303	0/0:32,0:32:84.27:0,84,1307	0/0:33,0:33:81.28:0,81,1300	0/0:34,2:36:19.92:0,20,1244	1/1:6,27:33:72.06:856,72,0	0/0:14,0:14:36.12:0,36,570	0/0:15,0:15:33.10:0,33,495	0/1:12,1:13:38.78:39,0,381	0/0:42,0:42:99:0,114,1749	0/0:20,1:21:2.50:0,2,530	0/0:14,1:15:2.47:0,2,538	0/0:28,2:30:41.60:0,42,1180	0/0:17,0:17:42.14:0,42,668	1/1:5,21:26:60.05:730,60,0	1/1:9,14:23:39.12:477,39,0	0/1:1,3:3:8.95:64,0,9
chr10	4437342	.	GCGCACGCACACACACACACACACACACACACA	G	10776.13	PASS	AB=0.758;AC=12;AF=0.214;AN=56;BaseQRankSum=10.529;DP=476;FS=16.572;HRun=0;HaplotypeScore=329.2427;InbreedingCoeff=0.7789;MQ=64.66;MQ0=7;MQRankSum=-8.058;QD=101.66;ReadPosRankSum=4.867;VQSLOD=2.9369;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:37:56.02:0,56,3419	0/0:13,0:13:29.89:0,30,2822	0/0:7,0:6:6.17:0,6,87	0/1:13,0:6:3.67:4,0,48	0/0:17,0:17:39.13:0,39,3534	0/0:19,0:19:57.19:0,57,6680	0/0:20,0:20:54.63:0,55,4187	0/0:14,0:14:33.11:0,33,2148	0/0:14,0:14:33.10:0,33,3251	0/0:12,0:11:30.10:0,30,2451	0/0:12,0:12:33.10:0,33,3700	0/0:22,0:21:55.02:0,55,5319	0/0:19,0:19:54.56:0,55,4863	0/0:18,0:18:44.17:0,44,4407	1/1:1,18:19:24.08:2040,24,0	0/0:10,0:10:24.08:0,24,2395	0/0:23,0:23:48.64:0,49,5342	1/1:0,11:11:9.03:766,9,0	0/0:13,0:11:30.07:0,30,2579	0/0:16,0:16:45.15:0,45,5314	0/0:25,0:25:66.22:0,66,6114	0/0:18,0:17:31.03:0,31,2806	0/0:12,0:12:24.04:0,24,2444	0/0:28,0:28:72.69:0,73,7119	1/1:1,13:16:30.10:2454,30,0	0/1:1,16:17:99:1716,0,175	1/1:0,24:24:30.10:2541,30,0	1/1:2,4:5:15.05:1257,15,0
chr10	4437348	.	GCA	G	1008.20	PASS	AB=0.896;AC=28;AF=0.538;AN=52;BaseQRankSum=8.535;DP=477;FS=11.612;HRun=0;HaplotypeScore=122.2767;InbreedingCoeff=0.0713;MQ=61.77;MQ0=9;MQRankSum=-3.479;QD=2.81;ReadPosRankSum=3.429;VQSLOD=1.6704;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:35:2.53:14,3,0	0/1:14,0:14:14.08:14,0,185	./.	./.	0/0:18,0:18:15.05:0,15,225	0/0:21,0:21:35.97:0,36,524	1/1:11,6:18:20.89:212,21,0	0/0:19,0:19:26.49:0,26,168	0/1:10,4:14:14.89:15,0,195	0/0:15,0:14:9:0,9,94	0/0:11,0:11:9.46:0,9,228	0/1:19,0:18:32.01:32,0,258	0/1:16,1:17:24.63:25,0,295	0/1:20,0:19:8.98:9,0,289	1/1:19,0:19:22.52:111,23,0	0/1:5,2:8:17.92:18,0,146	0/1:13,1:25:8.89:9,0,216	1/1:11,0:11:8.52:42,9,0	0/1:10,1:10:20.92:21,0,100	0/0:16,0:16:24.07:0,24,331	0/1:26,1:27:88.69:89,0,155	0/1:9,7:16:0.84:90,0,1	0/1:9,2:11:51.06:51,0,75	0/1:23,4:27:23.74:24,0,481	1/1:16,0:16:25.10:120,25,0	1/1:17,0:17:17.04:84,17,0	1/1:24,0:24:28.06:135,28,0	1/1:6,0:5:14.20:70,14,0
chr10	4439091	.	CT	C	1073.24	PASS	AB=0.774;AC=13;AF=0.232;AN=56;BaseQRankSum=8.311;DP=507;FS=1.763;HRun=12;HaplotypeScore=58.0090;InbreedingCoeff=0.6060;MQ=66.13;MQ0=9;MQRankSum=0.397;QD=8.87;ReadPosRankSum=2.684;VQSLOD=2.6071;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:81.63:0,82,822	0/0:9,0:10:23.88:0,24,227	0/0:27,1:10:2.90:0,3,17	0/0:25,0:10:1.35:0,1,28	0/0:24,0:23:51.09:0,51,512	0/0:16,0:17:47.93:0,48,470	0/0:13,0:14:29.89:0,30,288	0/0:12,0:33:58.36:0,58,353	0/0:8,0:9:20.86:0,21,190	0/0:29,1:30:43.36:0,43,605	0/0:19,0:19:46.96:0,47,446	0/0:14,0:14:39.08:0,39,395	0/0:20,0:20:48.08:0,48,477	0/0:11,0:11:27.05:0,27,274	1/1:4,13:17:32.86:255,33,0	0/1:8,2:10:7.74:8,0,108	0/0:25,3:29:24.50:0,24,585	1/1:5,19:25:37.89:284,38,0	0/0:20,1:21:14.33:0,14,329	0/0:22,0:23:68.93:0,69,670	0/0:3,0:3:6.01:0,6,61	0/1:7,1:8:6.49:6,0,109	0/0:8,0:8:18.02:0,18,176	0/0:14,0:14:6.79:0,7,241	1/1:12,8:19:32.36:239,32,0	1/1:4,15:20:42.90:313,43,0	0/1:3,6:9:39.86:94,0,40	1/1:9,2:10:5.96:46,6,0
chr10	4440684	.	CTT	C	6641.27	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=16.614;DP=759;FS=0.686;HRun=3;HaplotypeScore=95.9614;InbreedingCoeff=0.9812;MQ=85.32;MQ0=0;MQRankSum=-5.068;QD=42.57;ReadPosRankSum=4.132;VQSLOD=4.5010;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:57:99:0,172,3236	0/0:3,0:3:9.03:0,9,174	0/0:26,0:26:72.23:0,72,1343	0/0:22,0:22:60.19:0,60,1085	0/0:32,0:32:93.32:0,93,1779	0/0:24,0:24:72.24:0,72,1348	0/0:22,0:22:66.23:0,66,1276	0/0:34,0:34:99:0,102,1936	0/0:32,0:32:96.33:0,96,1855	0/0:31,0:31:87.30:0,87,1682	0/0:14,0:14:42.14:0,42,811	0/0:24,0:24:72.24:0,72,1353	0/0:26,0:26:78.27:0,78,1488	0/0:26,0:26:78.27:0,78,1507	1/1:0,35:35:99:1608,105,0	0/0:28,0:28:84.29:0,84,1623	0/0:36,0:36:99:0,108,2068	1/1:2,25:27:14.27:999,14,0	0/0:18,0:18:45.15:0,45,860	0/0:19,0:19:57.20:0,57,1096	0/0:45,0:45:99:0,135,2585	0/0:26,0:26:75.26:0,75,1449	0/0:20,0:20:60.21:0,60,1149	0/0:38,0:38:99:0,114,2158	1/1:0,27:27:75.25:1148,75,0	1/1:1,30:31:90.31:1379,90,0	1/1:1,29:30:84.28:1278,84,0	1/1:0,6:6:15.05:230,15,0
chr10	4440889	.	TA	T	4866.50	PASS	AB=0.532;AC=11;AF=0.196;AN=56;BaseQRankSum=13.906;DP=662;FS=0.365;HRun=1;HaplotypeScore=63.8304;InbreedingCoeff=0.8869;MQ=78.97;MQ0=0;MQRankSum=-0.210;QD=34.51;ReadPosRankSum=2.338;VQSLOD=4.8518;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,114,1566	0/0:19,0:19:57.15:0,57,758	0/0:16,0:16:48.11:0,48,618	0/0:17,0:16:38.97:0,39,491	0/0:37,0:37:99:0,111,1510	0/0:24,0:24:72.19:0,72,967	0/0:19,0:19:53.34:0,53,733	0/0:31,0:31:90.18:0,90,1175	0/0:22,0:22:66.22:0,66,940	0/0:28,0:28:81.23:0,81,1095	0/0:21,0:21:63.18:0,63,861	0/0:26,0:26:78.17:0,78,1035	0/0:29,0:29:87.02:0,87,1151	0/0:23,0:23:60.83:0,61,877	1/1:0,28:28:75.25:1046,75,0	0/0:24,0:24:72.21:0,72,980	0/0:19,0:19:54.16:0,54,750	1/1:1,17:18:18.14:520,18,0	0/0:15,0:15:45.13:0,45,622	0/0:30,0:30:90.30:0,90,1278	0/0:18,0:18:54.16:0,54,750	0/0:22,0:22:63.17:0,63,856	0/0:29,0:29:87.28:0,87,1224	0/0:14,0:14:42.12:0,42,579	1/1:0,27:27:72.24:1004,72,0	0/1:3,22:25:17.02:794,0,17	1/1:0,33:33:84.28:1169,84,0	1/1:0,10:10:24.08:334,24,0
chr10	4441138	.	AT	A	1247.66	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.882;DP=682;FS=15.823;HRun=1;HaplotypeScore=65.0621;InbreedingCoeff=0.9920;MQ=81.64;MQ0=0;MQRankSum=-3.737;QD=37.81;ReadPosRankSum=1.043;VQSLOD=2.3476;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,33:33:96.32:1343,96,0	0/0:16,0:16:48.16:0,48,767	0/0:22,0:22:65.94:0,66,956	0/0:20,0:20:57.15:0,57,805	0/0:35,0:35:99:0,105,1654	0/0:27,0:27:81.28:0,81,1291	0/0:25,0:25:75.26:0,75,1199	0/0:37,0:37:99:0,108,1641	0/0:23,0:23:69.20:0,69,1052	0/0:34,0:34:99:0,102,1587	0/0:28,0:28:81.23:0,81,1224	0/0:20,0:20:60.20:0,60,951	0/0:25,0:25:75.26:0,75,1199	0/0:26,0:26:78.27:0,78,1240	0/0:26,0:26:78.27:0,78,1244	0/0:21,0:21:63.17:0,63,936	0/0:36,0:36:99:0,108,1669	0/0:18,0:18:51.17:0,51,814	0/0:22,0:22:66.18:0,66,1027	0/0:21,0:21:63.20:0,63,978	0/0:30,0:30:90.29:0,90,1411	0/0:15,0:15:42.13:0,42,646	0/0:21,0:21:63.20:0,63,983	0/0:22,0:22:66.22:0,66,1051	0/0:20,0:20:60.20:0,60,955	0/0:23,0:23:69.21:0,69,1054	0/0:30,0:30:90.28:0,90,1387	0/0:6,0:6:18.06:0,18,288
chr10	4442234	.	GT	G	2939.18	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=9.971;DP=654;FS=0.000;HRun=8;HaplotypeScore=67.1738;InbreedingCoeff=0.9986;MQ=77.04;MQ0=0;MQRankSum=-1.529;QD=20.99;ReadPosRankSum=4.451;VQSLOD=3.6632;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,105,1258	0/0:14,0:14:42.12:0,42,496	0/0:21,0:20:35.35:0,35,446	0/0:16,0:16:23.83:0,24,322	0/0:15,0:15:45.13:0,45,534	0/0:22,0:22:60.13:0,60,678	0/0:32,0:32:84.23:0,84,1000	0/0:23,0:23:57.17:0,57,679	0/0:28,0:28:72.22:0,72,869	0/0:24,0:24:60.17:0,60,707	0/0:9,0:9:23.98:0,24,247	0/0:43,0:43:99:0,117,1399	0/0:34,0:34:93.25:0,93,1099	0/0:27,0:28:72.06:0,72,824	1/1:2,38:40:96.15:927,96,0	0/0:25,0:25:60.18:0,60,725	0/0:32,0:32:93.26:0,93,1108	1/1:2,19:21:48.07:462,48,0	0/0:18,0:18:48.13:0,48,569	0/0:14,0:14:39.09:0,39,435	0/0:32,0:32:75.21:0,75,885	0/0:17,0:17:51.14:0,51,595	0/0:13,0:13:36.10:0,36,425	0/0:18,0:18:54.15:0,54,639	1/1:4,12:16:36.05:347,36,0	1/1:3,19:22:51.07:493,51,0	1/1:1,26:27:69.10:666,69,0	1/1:6,8:14:24.03:232,24,0
chr10	4442735	.	CA	C	1008.46	PASS	AB=0.968;AC=31;AF=0.554;AN=56;BaseQRankSum=1.160;DP=209;FS=12.063;HRun=1;HaplotypeScore=119.6286;InbreedingCoeff=-0.1410;MQ=53.36;MQ0=0;MQRankSum=-1.079;QD=5.60;ReadPosRankSum=3.476;VQSLOD=-0.4945;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:9,0:9:1.76:34,0,2	1/1:3,0:3:5.78:44,6,0	1/1:3,0:3:2.03:6,2,0	0/1:4,1:5:11.38:45,0,11	1/1:9,0:9:3.01:31,3,0	1/1:6,0:6:16.59:89,17,0	0/1:14,0:14:32.42:52,0,32	0/0:8,0:8:5.23:0,5,63	0/1:6,0:6:19.60:41,0,20	0/1:9,0:10:19.82:80,0,20	0/1:10,0:10:13.76:28,0,14	0/1:12,0:12:7.37:89,0,7	0/1:5,2:7:4.34:53,0,4	0/1:17,0:17:43.93:88,0,44	0/1:6,0:6:25.20:25,0,25	1/1:7,0:7:19.58:100,20,0	1/1:15,0:15:27.83:191,28,0	0/1:7,0:7:7.08:24,0,7	0/1:5,0:5:8.78:9,0,19	0/1:5,0:5:6.17:6,0,10	0/1:9,1:10:6.12:32,0,6	0/0:5,0:5:2.80:0,3,13	1/1:6,0:6:7:46,7,0	1/1:5,0:5:6.05:32,6,0	0/0:6,0:6:11.36:0,11,58	0/1:3,0:3:12.95:20,0,13	0/0:7,0:7:5.17:0,5,62	0/0:3,0:3:3.78:0,4,11
chr10	4442736	.	A	AC	3591.42	PASS	AB=0.833;AC=54;AF=0.964;AN=56;BaseQRankSum=-1.157;DP=215;FS=0.000;HRun=4;HaplotypeScore=115.3378;InbreedingCoeff=0.1514;MQ=53.07;MQ0=0;MQRankSum=-0.869;QD=16.70;ReadPosRankSum=0.190;VQSLOD=2.6284;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,8:11:18.06:233,18,0	1/1:1,2:3:6.02:67,6,0	1/1:2,1:3:3.01:41,3,0	0/1:5,0:5:5.24:25,0,5	1/1:1,7:8:2.92:17,3,0	1/1:0,6:6:18.05:214,18,0	1/1:12,4:16:29.09:316,29,0	1/1:4,3:7:11.77:126,12,0	1/1:3,3:6:9.50:113,9,0	1/1:4,6:10:23.30:261,23,0	1/1:7,4:11:11.67:106,12,0	1/1:9,3:12:27.48:291,27,0	1/1:6,3:9:14.87:150,15,0	1/1:11,6:17:27.21:269,27,0	1/1:4,0:6:6.78:20,7,0	1/1:4,3:7:13:162,13,0	1/1:8,7:15:38.88:403,39,0	1/1:4,0:7:18.45:85,18,0	1/1:2,4:6:15.01:184,15,0	1/1:2,3:5:3.01:35,3,0	1/1:4,4:8:9.02:118,9,0	1/1:1,3:4:3.01:42,3,0	1/1:2,5:7:15.01:169,15,0	1/1:2,3:5:8.99:97,9,0	0/1:3,0:6:1.13:1,0,6	1/1:4,0:4:0.89:2,1,0	1/1:6,0:7:7.19:25,7,0	1/1:2,0:4:5.09:19,5,0
chr10	4444119	.	TCTGA	T	6608.72	PASS	AB=0.527;AC=11;AF=0.196;AN=56;BaseQRankSum=13.579;DP=833;FS=0.000;HRun=0;HaplotypeScore=137.6709;InbreedingCoeff=0.8867;MQ=81.83;MQ0=0;MQRankSum=-4.987;QD=46.54;ReadPosRankSum=4.536;VQSLOD=5.5500;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,163,4398	0/0:13,0:13:33.11:0,33,902	0/0:32,0:32:90.30:0,90,2159	0/0:20,0:20:42.35:0,42,1223	0/0:27,0:27:63.22:0,63,1701	0/0:32,0:32:96.33:0,96,2591	0/0:39,0:39:99:0,111,3017	0/0:31,0:31:87.30:0,87,2316	0/0:16,0:16:45.15:0,45,1232	0/0:37,0:37:99:0,108,2873	0/0:23,0:23:63.22:0,63,1690	0/0:38,0:38:99:0,111,2918	0/0:28,0:28:84.29:0,84,2275	0/0:32,0:32:90.31:0,90,2440	1/1:1,29:29:72.25:1396,72,0	0/0:47,0:47:99:0,141,3768	0/0:34,0:34:99:0,99,2675	1/1:1,24:25:60.21:1160,60,0	0/0:25,0:25:75.26:0,75,2002	0/0:22,0:22:60.21:0,60,1638	0/0:57,0:57:99:0,166,4398	0/0:25,0:24:66.23:0,66,1803	0/0:27,0:27:75.26:0,75,2018	0/0:31,0:31:90.31:0,90,2386	1/1:1,15:16:33.11:635,33,0	0/1:3,26:28:48.15:1341,0,48	1/1:1,27:28:69.24:1333,69,0	1/1:1,13:14:39.13:745,39,0
chr10	4448136	.	GAA	G	5346.62	PASS	AB=0.516;AC=11;AF=0.196;AN=56;BaseQRankSum=10.021;DP=821;FS=8.698;HRun=3;HaplotypeScore=106.8734;InbreedingCoeff=0.8870;MQ=83.03;MQ0=1;MQRankSum=-2.133;QD=38.19;ReadPosRankSum=4.389;VQSLOD=3.9149;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:69,0:69:99:0,205,3814	0/0:8,0:8:24.07:0,24,427	0/0:30,0:29:87.25:0,87,1482	0/0:28,0:28:60.61:0,61,1080	0/0:23,0:23:66.11:0,66,1229	0/0:25,0:25:75.25:0,75,1411	0/0:26,0:26:78.27:0,78,1507	0/0:28,0:28:78.26:0,78,1476	0/0:28,0:28:84.27:0,84,1579	0/0:31,0:31:93.30:0,93,1760	0/0:19,0:19:57.11:0,57,969	0/0:29,0:29:87.26:0,87,1636	0/0:28,0:28:84.29:0,84,1622	0/0:34,0:34:99:0,102,1889	1/1:0,30:30:87.30:1332,87,0	0/0:34,0:34:99:0,99,1913	0/0:41,0:41:99:0,123,2307	1/1:0,23:23:63.21:965,63,0	0/0:16,0:16:48.16:0,48,919	0/0:20,0:20:60.20:0,60,1070	0/0:58,0:58:99:0,163,3101	0/0:41,0:41:99:0,120,2210	0/0:17,0:17:51.13:0,51,901	0/0:48,0:48:99:0,144,2720	1/1:1,15:15:30.10:459,30,0	0/1:2,30:32:22.53:1213,0,23	1/1:0,20:20:51.17:781,51,0	1/1:0,19:19:39.13:597,39,0
chr10	4450947	.	TGTGA	T	1264.13	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.750;DP=749;FS=2.600;HRun=0;HaplotypeScore=111.2301;InbreedingCoeff=0.9766;MQ=63.73;MQ0=29;MQRankSum=-0.846;QD=38.31;ReadPosRankSum=-0.318;VQSLOD=3.9484;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,30:32:78.09:1359,78,0	0/0:11,0:11:33.11:0,33,903	0/0:20,0:8:15:0,15,231	0/0:30,0:19:18.21:0,18,673	0/0:25,0:25:72.25:0,72,1971	0/0:24,0:23:69.22:0,69,1829	0/0:36,0:36:99:0,99,2523	0/0:23,0:18:51.17:0,51,1303	0/0:27,0:27:78.27:0,78,2107	0/0:19,0:19:54.18:0,54,1424	0/0:26,0:26:69.24:0,69,1855	0/0:17,0:17:48.16:0,48,1278	0/0:29,0:29:81.28:0,81,2153	0/0:29,0:29:84.29:0,84,2298	0/0:41,0:41:99:0,111,3013	0/0:42,0:41:99:0,114,3105	0/0:21,0:21:45.15:0,45,1205	0/0:22,0:21:57.15:0,57,1498	0/0:24,0:22:60.15:0,60,1526	0/0:45,0:45:99:0,132,3561	0/0:32,0:32:78.25:0,78,2079	0/0:23,0:23:69.24:0,69,1886	0/0:24,0:24:66.18:0,66,1556	0/0:27,0:27:75.26:0,75,2050	0/0:25,0:25:72.25:0,72,1938	0/0:28,0:28:81.28:0,81,2173	0/0:27,0:27:81.28:0,81,2215	0/0:19,0:19:51.18:0,51,1397
chr10	4480860	.	CTG	C	5824.01	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=14.548;DP=778;FS=4.639;HRun=0;HaplotypeScore=102.7897;InbreedingCoeff=0.9973;MQ=81.53;MQ0=0;MQRankSum=-0.487;QD=38.57;ReadPosRankSum=2.471;VQSLOD=7.1285;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,162,2965	0/0:12,0:12:36.11:0,36,642	0/0:27,0:28:63.09:0,63,1045	0/0:17,0:17:20.32:0,20,643	0/0:28,0:28:78.27:0,78,1451	0/0:30,0:30:87.28:0,87,1596	0/0:31,0:31:93.31:0,93,1711	0/0:25,0:25:69.22:0,69,1227	0/0:32,0:32:96.31:0,96,1765	0/0:22,0:22:66.23:0,66,1237	0/0:17,0:17:42.13:0,42,741	0/0:28,0:28:78.27:0,78,1445	0/0:40,0:40:99:0,117,2100	0/0:30,0:30:84.27:0,84,1542	1/1:1,34:35:96.32:1414,96,0	0/0:35,0:35:99:0,102,1904	0/0:26,0:26:78.25:0,78,1421	1/1:0,24:24:66.22:972,66,0	0/0:21,0:21:63.22:0,63,1178	0/0:23,0:23:66.23:0,66,1236	0/0:53,0:53:99:0,157,2889	0/0:23,0:23:69.21:0,69,1229	0/0:18,0:18:54.19:0,54,998	0/0:33,0:33:99:0,99,1832	1/1:0,20:20:48:707,48,0	1/1:2,30:32:37.07:1230,37,0	1/1:1,33:34:84.28:1237,84,0	1/1:0,6:6:18.06:265,18,0
chr10	4481098	.	CT	C	4821.58	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=14.795;DP=724;FS=0.727;HRun=3;HaplotypeScore=77.4923;InbreedingCoeff=0.9996;MQ=85.49;MQ0=0;MQRankSum=-3.208;QD=32.80;ReadPosRankSum=4.432;VQSLOD=5.1093;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,117,1679	0/0:9,0:9:27.09:0,27,389	0/0:24,0:24:69.17:0,69,915	0/0:22,0:22:62.97:0,63,814	0/0:14,0:14:36.12:0,36,517	0/0:26,0:26:78.26:0,78,1116	0/0:28,0:28:84.28:0,84,1208	0/0:27,0:27:78.24:0,78,1077	0/0:29,0:29:84.27:0,84,1192	0/0:24,0:24:72.24:0,72,1023	0/0:17,0:17:51.16:0,51,717	0/0:29,0:29:87.28:0,87,1234	0/0:31,0:31:90.29:0,90,1276	0/0:33,0:33:99:0,99,1359	1/1:2,27:29:78.24:967,78,0	0/0:20,0:20:57.16:0,57,770	0/0:51,0:50:99:0,153,2142	1/1:0,34:34:81.25:1004,81,0	0/0:20,0:20:54.16:0,54,752	0/0:18,0:18:48.15:0,48,669	0/0:45,0:45:99:0,132,1884	0/0:16,0:16:45.15:0,45,642	0/0:20,0:20:57.18:0,57,803	0/0:34,0:34:99:0,102,1467	1/1:0,23:23:60.19:744,60,0	1/1:1,27:28:81.24:992,81,0	1/1:0,24:24:63.20:780,63,0	1/1:0,9:9:27.08:335,27,0
chr10	4481341	.	AAACCAACAAAC	A	9316.10	PASS	AB=0.518;AC=11;AF=0.196;AN=56;BaseQRankSum=14.205;DP=651;FS=1.325;HRun=0;HaplotypeScore=213.2431;InbreedingCoeff=0.8597;MQ=72.72;MQ0=0;MQRankSum=-13.220;QD=72.78;ReadPosRankSum=2.528;VQSLOD=4.8613;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,132,6589	0/0:6,0:6:18.06:0,18,983	0/0:25,0:23:37.85:0,38,2420	0/0:30,0:26:66.29:0,66,2481	0/0:14,0:14:42.13:0,42,2196	0/0:19,0:19:57.20:0,57,3059	0/0:25,0:24:75.26:0,75,3870	0/0:26,0:26:75.26:0,75,3515	0/0:15,0:15:45.15:0,45,2407	0/0:25,0:25:72.25:0,72,3502	0/0:18,0:18:54.19:0,54,2884	0/0:29,0:29:84.29:0,84,4364	0/0:24,0:24:66.20:0,66,3363	0/0:25,0:25:75.26:0,75,3742	1/1:2,25:27:66.23:2354,66,0	0/0:30,0:30:90.31:0,90,4882	0/0:22,0:22:63.21:0,63,3210	1/1:2,13:15:21.07:692,21,0	0/0:25,0:25:72.25:0,72,3635	0/0:20,0:20:60.21:0,60,3286	0/0:29,0:29:81.27:0,81,4219	0/0:24,0:24:72.25:0,72,3732	0/0:17,0:17:48.16:0,48,2315	0/0:30,0:30:90.31:0,90,4689	1/1:1,23:24:45.15:1545,45,0	0/1:2,27:29:90.86:2161,0,91	1/1:3,25:28:66.23:2351,66,0	1/1:2,3:5:6.02:214,6,0
chr10	4482940	.	AC	A	6544.14	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=13.560;DP=637;FS=0.334;HRun=1;HaplotypeScore=66.9770;InbreedingCoeff=0.9985;MQ=79.39;MQ0=0;MQRankSum=-1.863;QD=38.49;ReadPosRankSum=2.638;VQSLOD=5.4739;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,99,1474	0/0:8,0:8:21.06:0,21,294	0/0:20,0:20:42.53:0,43,752	0/0:18,0:17:44.77:0,45,564	0/0:37,0:37:99:0,111,1635	0/0:19,0:19:54.18:0,54,808	0/0:16,0:16:48.10:0,48,636	0/0:31,0:31:90.23:0,90,1257	0/0:21,0:21:63.21:0,63,937	0/0:34,0:34:99:0,99,1409	0/0:16,0:16:48.04:0,48,669	0/0:33,0:33:96.22:0,96,1346	0/0:24,0:24:72.24:0,72,1064	0/0:19,0:19:57.19:0,57,853	1/1:0,24:24:72.24:1006,72,0	0/0:20,0:20:60.16:0,60,838	1/1:3,26:29:81.25:1113,81,0	1/1:2,16:18:48.16:668,48,0	0/0:22,0:22:66.20:0,66,933	0/0:13,0:13:39.05:0,39,518	0/0:21,0:21:57.16:0,57,806	0/0:11,0:11:33.11:0,33,493	0/0:18,0:18:51.17:0,51,763	0/0:31,0:31:90.27:0,90,1302	1/1:0,19:19:54.18:754,54,0	1/1:1,21:22:21.27:799,21,0	1/1:0,28:28:78.26:1089,78,0	1/1:7,23:30:84.23:1116,84,0
chr10	4483479	.	CT	C	2672.40	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=14.192;DP=657;FS=8.912;HRun=2;HaplotypeScore=105.1321;InbreedingCoeff=0.9989;MQ=76.10;MQ0=0;MQRankSum=-8.216;QD=23.86;ReadPosRankSum=-2.290;VQSLOD=2.0659;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:78.21:0,78,1140	0/0:16,0:16:48.16:0,48,718	0/0:15,0:15:45.10:0,45,627	0/0:15,0:15:42.12:0,42,570	0/0:29,0:29:87.28:0,87,1273	0/0:15,0:15:45.15:0,45,674	0/0:20,0:20:57.14:0,57,810	1/1:34,0:34:32.31:266,32,0	0/0:24,0:24:69.20:0,69,991	0/0:26,0:26:69.19:0,69,1033	0/0:13,0:13:39.13:0,39,583	0/0:38,0:38:99:0,114,1688	0/0:24,0:24:72.22:0,72,1038	0/0:30,0:30:87.27:0,87,1265	1/1:1,36:37:99:1359,111,0	0/0:31,0:30:93.31:0,93,1375	1/1:0,18:18:39.12:494,39,0	1/1:1,7:8:21.07:269,21,0	0/0:24,0:24:63.19:0,63,902	0/0:23,0:23:66.20:0,66,950	0/0:28,0:28:81.26:0,81,1193	0/0:16,0:16:48.14:0,48,681	0/0:15,0:15:45.15:0,45,673	0/0:20,0:20:60.19:0,60,880	1/1:2,13:15:39.10:460,39,0	0/0:33,0:33:99:0,99,1462	0/0:38,0:38:99:0,114,1653	0/0:21,0:21:63.20:0,63,924
chr10	4483481	.	TC	T	2263.37	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=13.438;DP=650;FS=8.271;HRun=2;HaplotypeScore=105.4002;InbreedingCoeff=0.9979;MQ=76.49;MQ0=0;MQRankSum=-8.814;QD=20.58;ReadPosRankSum=-1.887;VQSLOD=2.5098;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:78.25:0,78,1130	0/0:16,0:16:48.16:0,48,719	0/0:16,0:16:42.12:0,42,571	0/0:15,0:15:42.13:0,42,574	0/0:29,0:29:84.20:0,84,1230	0/0:16,0:16:48.15:0,48,697	0/0:19,0:19:51.16:0,51,743	1/1:0,32:32:96.30:1233,96,0	0/0:22,0:22:63.19:0,63,906	0/0:25,0:25:72.06:0,72,1028	0/0:13,0:13:39.12:0,39,564	0/0:38,0:38:99:0,114,1694	0/0:23,0:23:69.23:0,69,1032	0/0:30,0:30:90.29:0,90,1326	1/1:37,0:37:97.76:654,98,0	0/0:32,0:31:93.29:0,93,1355	1/1:19,0:19:21.13:220,21,0	1/1:7,0:7:20.64:130,21,0	0/0:22,0:22:66.20:0,66,947	0/0:24,0:24:72.21:0,72,1018	0/0:29,0:29:84.25:0,84,1199	0/0:15,0:15:42.13:0,42,609	0/0:16,0:16:48.14:0,48,679	0/0:20,0:20:60.20:0,60,896	1/1:15,0:15:31.48:201,31,0	0/0:32,0:32:96.33:0,96,1437	0/0:37,0:37:99:0,111,1619	0/0:20,0:20:60.20:0,60,891
chr10	4483509	.	CTT	C	3715.30	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=13.075;DP=616;FS=5.516;HRun=3;HaplotypeScore=90.5336;InbreedingCoeff=0.9957;MQ=72.33;MQ0=0;MQRankSum=-8.424;QD=39.95;ReadPosRankSum=-0.027;VQSLOD=2.9846;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,24:24:66.14:981,66,0	0/0:9,0:9:27.09:0,27,514	0/0:9,0:9:27.08:0,27,440	0/0:13,0:13:31.43:0,31,515	0/0:31,0:31:90.30:0,90,1705	0/0:16,0:16:48.16:0,48,928	0/0:15,0:15:45.12:0,45,803	0/0:36,0:36:99:0,108,1981	0/0:19,0:19:57.20:0,57,1094	0/0:28,0:28:84.28:0,84,1594	0/0:18,0:18:51.17:0,51,948	0/0:41,0:41:99:0,123,2376	0/0:21,0:21:63.21:0,63,1183	0/0:25,0:25:75.24:0,75,1367	1/1:2,27:29:81.27:1230,81,0	0/0:29,0:28:87.30:0,87,1675	1/1:2,12:14:33.11:504,33,0	1/1:1,6:7:15.05:229,15,0	0/0:25,0:25:72.24:0,72,1343	0/0:22,0:22:66.23:0,66,1265	0/0:25,0:25:75.24:0,75,1413	0/0:17,0:17:51.17:0,51,948	0/0:20,0:20:60.21:0,60,1159	0/0:21,0:21:63.22:0,63,1196	1/1:1,18:19:51.17:771,51,0	0/0:28,0:28:81.28:0,81,1560	0/0:39,0:39:99:0,117,2223	0/0:16,0:16:42.14:0,42,812
chr10	4484300	.	G	GGTTT	7326.37	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=10.495;DP=502;FS=4.485;HRun=0;HaplotypeScore=89.0489;InbreedingCoeff=0.9980;MQ=63.79;MQ0=0;MQRankSum=-10.002;QD=46.37;ReadPosRankSum=0.986;VQSLOD=5.4870;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:19,15:34:77.51:1270,78,0	0/0:12,0:12:36.10:0,36,646	0/0:19,0:16:38.48:0,38,520	0/0:20,0:16:38.06:0,38,579	0/0:23,0:23:63.17:0,63,1184	0/0:11,0:11:30.09:0,30,571	0/0:19,0:19:28.17:0,28,882	0/0:18,0:18:31.55:0,32,868	0/0:17,0:17:48.14:0,48,926	0/0:10,0:10:30.10:0,30,590	0/0:16,0:16:42.09:0,42,692	0/0:18,0:18:54.14:0,54,987	0/0:15,0:15:39.07:0,39,660	0/0:19,0:19:56.18:0,56,992	1/1:0,14:15:21.07:604,21,0	0/0:18,0:18:54.14:0,54,1004	1/1:11,11:22:44.98:816,45,0	1/1:0,19:23:27.09:760,27,0	0/0:19,0:19:57.08:0,57,888	0/0:10,0:10:27.07:0,27,489	0/0:29,0:29:78.06:0,78,1390	0/0:17,0:17:45.15:0,45,890	0/0:12,0:12:36.01:0,36,618	0/0:22,0:22:66.20:0,66,1285	1/1:1,21:23:45.15:1230,45,0	1/1:0,19:20:54.07:1201,54,0	1/1:0,12:12:27.09:753,27,0	1/1:0,8:9:24.08:692,24,0
chr10	4484301	.	A	AT	573.68	PASS	AB=0.948;AC=13;AF=0.232;AN=56;BaseQRankSum=9.974;DP=499;FS=4.504;HRun=10;HaplotypeScore=84.9063;InbreedingCoeff=0.5800;MQ=64.75;MQ0=0;MQRankSum=-9.142;QD=3.77;ReadPosRankSum=-0.772;VQSLOD=0.5313;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,26:34:56.41:481,56,0	0/0:12,0:12:29.94:0,30,245	0/0:19,0:18:20.64:0,21,172	0/0:19,0:16:19.35:0,19,137	0/0:23,0:23:62.88:0,63,511	0/1:11,1:12:2.05:2,0,189	0/0:19,0:19:41.94:0,42,344	0/0:17,0:17:35.79:0,36,285	0/0:16,0:16:44.32:0,44,352	0/0:10,0:10:26.97:0,27,222	0/0:16,0:16:44.92:0,45,364	0/0:18,0:18:44.94:0,45,369	0/0:15,0:15:41.92:0,42,342	0/0:19,0:19:53.92:0,54,443	0/0:14,0:14:0.91:0,1,6	0/0:18,0:18:50.94:0,51,419	1/1:22,0:22:32.14:135,32,0	1/1:22,0:22:7.17:26,7,0	0/0:19,0:19:41.84:0,42,332	0/0:9,0:9:20.96:0,21,172	0/0:30,0:30:48.59:0,49,540	0/0:17,0:17:35.93:0,36,295	0/0:12,0:12:29.91:0,30,243	0/0:20,0:22:58.01:0,58,455	0/1:21,2:23:15.98:30,0,16	0/1:20,0:20:21.28:21,0,25	1/1:10,1:11:0.40:25,0,0	1/1:8,0:8:2.04:12,2,0
chr10	4484303	.	T	TTA	1660.62	PASS	AB=1.000;AC=14;AF=0.250;AN=56;BaseQRankSum=14.334;DP=505;FS=6.324;HRun=0;HaplotypeScore=91.3520;InbreedingCoeff=0.7504;MQ=64.33;MQ0=0;MQRankSum=-9.386;QD=10.65;ReadPosRankSum=3.193;VQSLOD=3.0250;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:33:19.33:326,0,19	0/0:12,0:12:36.10:0,36,509	0/0:21,0:18:22.43:0,22,452	0/0:19,0:15:32.17:0,32,397	0/0:23,0:23:66.21:0,66,985	0/0:13,0:13:32.64:0,33,439	0/0:20,0:20:45.14:0,45,666	0/0:17,0:17:48.06:0,48,631	0/0:16,0:16:45.15:0,45,682	0/0:10,0:10:30.10:0,30,442	0/0:16,0:16:48.15:0,48,709	0/0:17,0:17:51.16:0,51,741	0/0:16,0:16:48.10:0,48,683	0/0:20,0:20:60.15:0,60,870	1/1:16,0:16:1.74:74,2,0	0/0:18,0:18:54.17:0,54,806	1/1:3,21:24:45.05:563,45,0	1/1:22,0:22:8.21:171,8,0	0/0:20,0:20:51.12:0,51,713	0/0:8,0:8:24.07:0,24,339	0/0:31,0:31:85.76:0,86,1178	0/0:17,0:17:48.13:0,48,656	0/0:12,0:12:36.07:0,36,503	0/0:23,0:23:66.17:0,66,928	1/1:23,0:23:18.84:194,19,0	0/1:19,0:19:49.93:230,0,50	1/1:11,0:11:25.66:151,26,0	1/1:8,0:8:22.93:134,23,0
chr10	4484565	.	TG	T	151.38	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=6.140;DP=729;FS=0.000;HRun=1;HaplotypeScore=74.6252;InbreedingCoeff=0.6549;MQ=72.81;MQ0=0;MQRankSum=-3.650;QD=6.31;ReadPosRankSum=1.586;VQSLOD=0.6001;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:59,0:59:99:0,169,2610	0/0:9,0:9:27.09:0,27,427	0/0:18,0:19:47.76:0,48,664	0/1:10,0:10:14.42:14,0,320	0/0:31,0:31:81.28:0,81,1294	0/0:28,0:28:84.29:0,84,1343	0/0:27,0:27:81.28:0,81,1292	0/0:38,0:38:99:0,114,1794	0/0:23,0:23:69.24:0,69,1098	0/0:27,0:27:81.28:0,81,1296	0/0:17,0:17:48.16:0,48,761	0/0:35,0:35:99:0,105,1656	0/0:21,0:21:63.21:0,63,1000	0/0:36,0:36:99:0,108,1721	0/0:26,0:26:78.25:0,78,1221	0/0:39,0:39:99:0,117,1848	1/1:2,12:14:30.22:241,30,0	0/0:28,0:28:81.21:0,81,1218	0/0:16,0:16:48.16:0,48,759	0/0:27,0:27:78.23:0,78,1193	0/0:28,0:28:81.28:0,81,1291	0/0:31,0:31:90.29:0,90,1407	0/0:15,0:15:45.15:0,45,719	0/0:33,0:33:99:0,99,1537	0/0:22,0:22:66.23:0,66,1055	0/0:33,0:33:99:0,99,1511	0/0:28,0:28:81.26:0,81,1262	0/0:9,0:9:27.09:0,27,432
chr10	4484567	.	TCA	T	77.67	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.863;DP=733;FS=2.412;HRun=0;HaplotypeScore=90.8286;InbreedingCoeff=0.9977;MQ=74.44;MQ0=0;MQRankSum=-4.247;QD=5.97;ReadPosRankSum=1.391;VQSLOD=3.1789;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:64,0:64:99:0,184,3612	0/0:10,0:10:30.10:0,30,595	0/0:21,0:21:34.28:0,34,894	0/0:11,0:11:33.06:0,33,530	0/0:30,0:30:81.28:0,81,1605	0/0:28,0:28:84.29:0,84,1686	0/0:27,0:27:81.28:0,81,1631	0/0:38,0:38:99:0,114,2226	0/0:24,0:24:72.23:0,72,1413	0/0:28,0:28:84.29:0,84,1702	0/0:17,0:17:48.16:0,48,975	0/0:35,0:35:99:0,105,2133	0/0:20,0:20:60.21:0,60,1218	0/0:37,0:37:99:0,111,2220	0/0:25,0:25:75.26:0,75,1513	0/0:39,0:39:99:0,117,2331	1/1:1,12:13:31.69:172,32,0	0/0:26,0:26:78.22:0,78,1524	0/0:15,0:15:45.15:0,45,906	0/0:26,0:26:75.24:0,75,1486	0/0:28,0:28:81.28:0,81,1645	0/0:28,0:28:84.29:0,84,1707	0/0:16,0:16:48.16:0,48,951	0/0:34,0:34:99:0,102,2007	0/0:23,0:23:66.23:0,66,1341	0/0:33,0:33:99:0,99,2012	0/0:28,0:28:81.26:0,81,1591	0/0:9,0:9:27.09:0,27,548
chr10	4484570	.	GC	G	138.53	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.725;DP=742;FS=2.392;HRun=1;HaplotypeScore=76.8373;InbreedingCoeff=0.9978;MQ=76.83;MQ0=0;MQRankSum=-4.284;QD=10.66;ReadPosRankSum=1.213;VQSLOD=1.7217;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:64,0:64:99:0,184,2925	0/0:11,0:11:33.11:0,33,524	0/0:23,0:23:29.75:0,30,875	0/0:13,0:13:39.13:0,39,623	0/0:28,0:28:78.26:0,78,1230	0/0:28,0:28:81.28:0,81,1295	0/0:30,0:30:87.30:0,87,1381	0/0:34,0:34:99:0,102,1603	0/0:24,0:24:72.25:0,72,1143	0/0:29,0:29:87.30:0,87,1390	0/0:18,0:18:51.16:0,51,792	0/0:37,0:37:99:0,111,1773	0/0:21,0:21:63.18:0,63,956	0/0:35,0:35:99:0,105,1630	0/0:23,0:23:69.24:0,69,1103	0/0:40,0:40:99:0,120,1888	1/1:1,12:13:32.35:233,32,0	0/0:26,0:26:78.27:0,78,1247	0/0:17,0:17:51.17:0,51,813	0/0:26,0:26:75.26:0,75,1187	0/0:29,0:29:84.25:0,84,1285	0/0:28,0:28:84.27:0,84,1320	0/0:15,0:15:45.15:0,45,720	0/0:34,0:34:99:0,102,1601	0/0:23,0:23:66.23:0,66,1055	0/0:36,0:36:99:0,108,1700	0/0:28,0:28:81.23:0,81,1245	0/0:9,0:9:27.09:0,27,432
chr10	4486467	.	T	TC	6260.53	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-14.031;DP=670;FS=0.335;HRun=5;HaplotypeScore=63.6987;InbreedingCoeff=0.9872;MQ=88.04;MQ0=0;MQRankSum=-5.324;QD=33.30;ReadPosRankSum=-0.356;VQSLOD=5.0228;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,26:28:63.20:828,63,0	0/0:5,0:5:15.04:0,15,161	0/0:21,0:21:50.95:0,51,524	0/0:26,0:26:69.14:0,69,722	0/0:11,0:11:33.07:0,33,347	0/0:18,0:18:54.14:0,54,580	0/0:38,0:38:99:0,105,1110	1/1:2,26:28:78.25:1026,78,0	0/0:29,0:29:78.18:0,78,830	0/0:31,0:31:81.18:0,81,853	0/0:15,0:15:39.10:0,39,419	0/0:38,0:38:99:0,108,1153	0/0:33,0:33:84.19:0,84,894	0/0:25,0:25:75.19:0,75,806	1/1:5,25:30:66.21:869,66,0	0/0:27,0:27:78.20:0,78,838	1/1:2,31:33:90.29:1184,90,0	1/1:1,11:12:33.11:434,33,0	0/0:16,0:16:42.10:0,42,445	0/0:18,0:18:48.12:0,48,515	0/0:49,0:49:99:0,132,1389	0/0:26,0:26:69.17:0,69,741	0/0:22,0:22:60.15:0,60,644	0/0:34,0:34:96.24:0,96,1031	1/1:0,13:13:36.12:473,36,0	1/1:4,13:17:9.86:459,10,0	1/1:2,20:22:60.20:789,60,0	1/1:0,5:5:15.05:197,15,0
chr10	4486569	.	C	CGG	635.10	PASS	AB=0.667;AC=9;AF=0.161;AN=56;BaseQRankSum=4.597;DP=502;FS=0.676;HRun=9;HaplotypeScore=84.4505;InbreedingCoeff=0.6946;MQ=81.02;MQ0=0;MQRankSum=-1.499;QD=10.58;ReadPosRankSum=-4.135;VQSLOD=0.2934;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:24.04:0,24,92	0/0:8,0:8:8.89:0,9,96	0/0:28,0:28:12.12:0,12,295	0/0:22,0:20:9.15:0,9,207	0/0:9,0:9:21.05:0,21,220	0/0:14,0:15:35.82:0,36,361	0/0:31,0:32:80.83:0,81,808	1/1:6,0:6:3.64:25,4,0	0/0:18,0:18:39.06:0,39,413	0/0:27,0:27:54.04:0,54,546	0/0:10,0:11:20.69:0,21,178	0/0:32,0:33:61.26:0,61,582	0/0:26,0:26:54.05:0,54,573	0/0:29,0:29:78.16:0,78,817	1/1:14,2:19:31.84:280,32,0	0/0:14,0:15:1.10:0,1,229	1/1:11,3:17:26.88:300,27,0	0/1:5,5:10:25.89:40,0,26	0/0:10,0:9:24.06:0,24,254	0/0:18,0:18:26.68:0,27,285	0/0:32,0:32:54.03:0,54,565	0/0:18,0:19:47.77:0,48,481	0/0:7,0:7:12.03:0,12,127	0/0:19,0:19:45.07:0,45,462	1/1:8,0:8:14.99:143,15,0	0/0:18,0:18:36.07:0,36,376	0/0:20,0:20:44.95:0,45,459	0/0:2,0:2:3:0,3,32
chr10	4486576	.	GGGA	G	549.02	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.041;DP=501;FS=0.000;HRun=0;HaplotypeScore=82.7749;InbreedingCoeff=0.7894;MQ=78.11;MQ0=0;MQRankSum=-2.152;QD=23.87;ReadPosRankSum=-2.287;VQSLOD=3.0737;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:15,8:23:51.06:644,51,0	0/0:8,0:8:23.97:0,24,399	0/0:27,0:26:20.89:0,21,621	0/0:23,0:20:25.17:0,25,639	0/0:14,0:14:42.05:0,42,573	0/0:14,0:14:42.06:0,42,733	0/0:33,0:33:93.20:0,93,1643	0/0:8,0:8:11.05:0,11,122	0/0:18,0:18:54.14:0,54,934	0/0:27,0:27:66.07:0,66,1109	0/0:13,0:13:33:0,33,468	0/0:31,0:31:89.33:0,89,1447	0/0:27,0:27:75.19:0,75,1345	0/0:29,0:29:87.28:0,87,1633	0/0:17,0:17:44.87:0,45,488	0/0:20,0:20:51.09:0,51,813	0/0:15,0:15:14.30:0,14,387	0/0:6,0:6:6.02:0,6,96	0/0:13,0:12:36.06:0,36,566	0/0:14,0:14:33.10:0,33,634	0/0:34,0:34:80.85:0,81,1342	0/0:19,0:19:54.59:0,55,932	0/0:6,0:6:12.04:0,12,232	0/0:17,0:17:51.14:0,51,916	0/0:9,0:9:20.96:0,21,228	0/0:14,0:14:36.11:0,36,708	0/0:19,0:19:57.09:0,57,993	0/0:3,0:3:9.02:0,9,133
chr10	4486578	.	GA	G	321.72	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=8.497;DP=516;FS=11.387;HRun=1;HaplotypeScore=68.6574;InbreedingCoeff=0.7539;MQ=79.14;MQ0=0;MQRankSum=-1.339;QD=12.37;ReadPosRankSum=-1.672;VQSLOD=0.6436;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:23,3:26:58.92:416,59,0	0/0:8,0:8:23.86:0,24,274	0/0:28,0:27:25.67:0,26,437	0/0:23,1:22:22.71:0,23,368	0/0:14,0:14:42:0,42,408	0/0:14,0:14:36.81:0,37,434	0/0:31,0:31:85.07:0,85,1025	0/0:8,0:8:12.21:0,12,111	0/0:18,0:18:54.11:0,54,615	0/0:28,0:28:69.05:0,69,780	0/0:13,0:13:28.34:0,28,296	0/0:32,0:32:87.85:0,88,934	0/0:28,0:28:78.05:0,78,894	0/0:30,0:30:90.11:0,90,1034	0/0:18,0:18:18.67:0,19,182	0/0:19,0:19:54.03:0,54,559	0/0:16,0:16:5.91:0,6,160	0/0:7,0:7:5.22:0,5,45	0/0:13,0:12:36.04:0,36,389	0/0:14,0:14:33.06:0,33,390	0/0:31,0:31:83.93:0,84,919	0/0:21,0:21:55.54:0,56,653	0/0:7,0:7:15.03:0,15,158	0/0:19,0:19:57.06:0,57,628	0/0:11,0:11:25.33:0,25,166	0/0:14,0:14:38.95:0,39,456	0/0:20,0:20:59.42:0,59,640	0/0:4,0:4:12:0,12,111
chr10	4487462	.	AG	A	4583.45	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=11.488;DP=697;FS=3.910;HRun=1;HaplotypeScore=68.9343;InbreedingCoeff=0.9654;MQ=85.93;MQ0=0;MQRankSum=-0.945;QD=36.96;ReadPosRankSum=2.574;VQSLOD=5.4826;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:57:99:0,166,2576	0/0:12,0:12:36.11:0,36,550	0/0:25,0:25:65.41:0,65,956	0/0:22,0:22:63.15:0,63,934	0/0:25,0:25:75.25:0,75,1188	0/0:16,0:16:48.13:0,48,720	0/0:24,0:24:72.23:0,72,1126	0/0:34,0:34:99:0,102,1522	0/0:19,0:19:57.16:0,57,861	0/0:26,0:26:78.23:0,78,1180	0/0:19,0:19:57.18:0,57,885	0/0:35,0:35:99:0,105,1630	0/0:19,0:19:57.19:0,57,900	0/0:20,0:20:60.18:0,60,910	1/1:0,33:33:87.26:1196,87,0	0/0:31,0:31:93.32:0,93,1483	0/0:41,0:41:99:0,123,1935	1/1:0,10:10:30.10:420,30,0	0/0:20,0:20:60.18:0,60,900	0/0:30,0:30:90.29:0,90,1413	0/0:30,0:30:90.29:0,90,1404	0/0:18,0:18:54.17:0,54,838	0/0:21,0:21:60.19:0,60,933	0/0:29,0:29:84.29:0,84,1342	1/1:0,20:20:51.17:713,51,0	1/1:2,31:33:3.38:1170,3,0	1/1:0,20:20:54.16:749,54,0	1/1:0,8:8:24.08:335,24,0
chr10	4487587	.	AGGG	A	1365.39	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=1.130;DP=476;FS=7.778;HRun=13;HaplotypeScore=81.3319;InbreedingCoeff=0.7626;MQ=78.44;MQ0=3;MQRankSum=-0.060;QD=15.88;ReadPosRankSum=6.754;VQSLOD=1.6905;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:25:28.12:0,28,288	0/0:7,0:7:9.02:0,9,104	0/0:25,0:16:13.76:0,14,188	0/0:25,0:13:12.87:0,13,130	0/0:17,0:17:18.06:0,18,285	0/0:6,0:8:8.74:0,9,93	0/0:16,0:20:30.01:0,30,384	0/1:15,0:15:0:0,0,0	0/0:19,0:20:28.30:0,28,389	0/0:22,0:22:12.01:0,12,148	0/0:6,0:6:3.01:0,3,44	0/0:20,0:27:32.13:0,32,499	0/0:24,0:24:42.11:0,42,677	0/0:13,0:13:15.02:0,15,254	1/1:6,23:29:66.19:796,66,0	0/0:17,0:19:33.03:0,33,484	0/0:19,0:20:33.02:0,33,439	1/1:4,11:15:31.32:398,31,0	0/0:11,0:12:15.56:0,16,179	0/0:11,0:11:12.48:0,12,137	0/0:18,0:18:30.09:0,30,473	0/0:17,0:17:13.23:0,13,173	0/0:16,0:16:27.06:0,27,415	0/0:9,0:9:18.05:0,18,286	1/1:6,11:18:26.95:308,27,0	1/1:5,0:9:1.76:7,2,0	0/0:10,0:23:15.24:0,15,53	0/0:2,0:5:2.49:0,2,6
chr10	4489822	.	A	AG	3642.06	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=7.772;DP=777;FS=6.715;HRun=4;HaplotypeScore=110.6994;InbreedingCoeff=0.9974;MQ=81.43;MQ0=0;MQRankSum=-3.685;QD=37.55;ReadPosRankSum=1.699;VQSLOD=2.4944;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:90.98:0,91,523	0/0:7,0:7:21.04:0,21,273	0/0:19,0:19:57.16:0,57,735	0/0:30,0:30:87.28:0,87,1197	0/0:15,0:15:45.14:0,45,614	0/0:21,0:21:60.20:0,60,833	0/0:44,0:44:99:0,132,1792	0/0:22,0:22:47.88:0,48,248	0/0:37,0:37:99:0,111,1534	0/0:23,0:23:69.23:0,69,957	0/0:13,0:13:36.12:0,36,503	0/0:67,0:67:99:0,199,2730	0/0:26,0:26:78.24:0,78,1072	0/0:46,0:46:99:0,138,1910	1/1:7,33:40:99:1708,108,0	0/0:36,0:36:99:0,108,1492	1/1:15,0:15:37.40:178,37,0	1/1:1,21:22:50.25:848,50,0	0/0:17,0:17:51.16:0,51,692	0/0:9,0:9:27.09:0,27,373	0/0:99,0:99:99:0,292,4017	0/0:17,0:17:51.08:0,51,655	0/0:18,0:18:54.12:0,54,710	0/0:30,0:30:90.29:0,90,1231	1/1:2,18:20:57.19:907,57,0	0/0:23,0:23:36.44:0,36,318	0/0:19,0:19:55.72:0,56,345	0/0:8,0:8:21.29:0,21,118
chr10	4489867	.	AGCTGG	A	2908.25	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.165;DP=663;FS=0.000;HRun=0;HaplotypeScore=146.0903;InbreedingCoeff=0.9963;MQ=78.35;MQ0=1;MQRankSum=-10.055;QD=42.77;ReadPosRankSum=1.624;VQSLOD=3.2386;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:81.28:0,81,2506	0/0:8,0:8:21.54:0,22,655	0/0:14,0:14:23.59:0,24,757	0/0:18,0:18:45.15:0,45,1276	0/0:10,0:10:27.09:0,27,816	0/0:20,0:20:54:0,54,1526	0/0:42,0:42:99:0,123,3679	0/0:19,0:19:42.14:0,42,1295	0/0:34,0:34:99:0,102,3132	0/0:18,0:18:54.18:0,54,1624	0/0:12,0:12:33.10:0,33,966	0/0:55,0:55:99:0,166,4932	0/0:31,0:31:90.31:0,90,2754	0/0:44,0:44:99:0,129,4001	1/1:3,32:35:81.26:1661,81,0	0/0:30,0:30:87.27:0,87,2537	0/0:20,0:20:57.20:0,57,1782	1/1:7,13:20:39.13:820,39,0	0/0:15,0:15:39.13:0,39,1220	0/0:9,0:9:27.09:0,27,846	0/0:53,0:52:99:0,148,4535	0/0:12,0:12:36.12:0,36,1076	0/0:14,0:14:36.12:0,36,1126	0/0:46,0:46:99:0,132,4016	1/1:2,11:13:30.10:571,30,0	0/0:19,0:19:54.19:0,54,1639	0/0:13,0:12:36.10:0,36,1007	0/0:9,0:9:27.09:0,27,845
chr10	4489887	.	A	AG	1028.37	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.822;DP=691;FS=2.683;HRun=2;HaplotypeScore=94.8306;InbreedingCoeff=0.9947;MQ=80.41;MQ0=1;MQRankSum=-2.571;QD=35.46;ReadPosRankSum=1.095;VQSLOD=3.9258;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,28:29:78.26:1123,78,0	0/0:9,0:9:24.06:0,24,279	0/0:15,0:15:45.14:0,45,549	0/0:21,0:21:63.13:0,63,732	0/0:15,0:15:42.13:0,42,521	0/0:16,0:16:48.15:0,48,595	0/0:39,0:39:99:0,108,1276	0/0:18,0:18:45.13:0,45,547	0/0:34,0:34:98.80:0,99,1199	0/0:20,0:20:60.18:0,60,731	0/0:12,0:12:33.09:0,33,398	0/0:50,0:50:99:0,144,1772	0/0:32,0:32:93.29:0,93,1153	0/0:41,0:41:99:0,117,1449	0/0:35,0:35:87.27:0,87,1077	0/0:34,0:34:96.30:0,96,1189	0/0:20,0:20:60.15:0,60,724	0/0:21,0:21:60.19:0,60,742	0/0:19,0:19:48.14:0,48,583	0/0:11,0:11:30.09:0,30,371	0/0:64,0:63:99:0,172,2117	0/0:11,0:11:33.09:0,33,397	0/0:14,0:14:36.11:0,36,446	0/0:44,0:44:99:0,132,1635	0/0:22,0:22:48.15:0,48,594	0/0:23,0:23:66.21:0,66,818	0/0:14,0:13:42.09:0,42,496	0/0:8,0:8:24.08:0,24,298
chr10	4490051	.	CTG	C	7652.45	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=15.305;DP=680;FS=12.146;HRun=0;HaplotypeScore=88.8164;InbreedingCoeff=0.9945;MQ=82.09;MQ0=3;MQRankSum=-2.240;QD=33.86;ReadPosRankSum=2.106;VQSLOD=6.9009;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,35:35:96.33:1470,96,0	0/0:5,0:5:12.04:0,12,231	0/0:14,0:14:39.60:0,40,710	0/0:23,0:23:66.22:0,66,1234	0/0:9,0:9:24.08:0,24,443	0/0:18,0:18:54.19:0,54,1043	0/0:38,0:38:99:0,114,2182	1/1:0,25:25:69.22:1033,69,0	0/0:27,0:27:78.24:0,78,1412	0/0:21,0:21:63.22:0,63,1217	0/0:12,0:12:36.12:0,36,682	0/0:51,0:51:99:0,151,2891	0/0:21,0:21:63.22:0,63,1207	0/0:21,0:21:63.20:0,63,1179	1/1:21,0:21:56.96:501,57,0	0/0:27,0:27:78.27:0,78,1507	1/1:1,31:30:84.29:1286,84,0	1/1:33,0:33:92.77:746,93,0	0/0:22,0:22:63.22:0,63,1185	0/0:12,0:12:33.11:0,33,638	0/0:53,0:53:99:0,157,2997	0/0:18,0:18:54.19:0,54,1035	0/0:15,0:15:42.14:0,42,811	0/0:47,0:47:99:0,138,2638	1/1:26,0:26:45.85:525,46,0	1/1:0,24:23:69.22:1036,69,0	1/1:1,21:21:45.15:689,45,0	1/1:0,8:8:24.08:368,24,0
chr10	4490053	.	GTA	G	6333.84	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=16.777;DP=671;FS=12.189;HRun=0;HaplotypeScore=92.1086;InbreedingCoeff=0.9944;MQ=82.41;MQ0=3;MQRankSum=-0.474;QD=28.40;ReadPosRankSum=2.365;VQSLOD=6.1508;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:35,0:35:95.60:741,96,0	0/0:4,0:4:12.04:0,12,243	0/0:15,0:15:33.14:0,33,780	0/0:22,0:22:66.23:0,66,1336	0/0:9,0:9:24.07:0,24,436	0/0:18,0:18:54.19:0,54,1070	0/0:39,0:39:99:0,117,2233	1/1:25,0:25:64.97:430,65,0	0/0:26,0:26:78.21:0,78,1478	0/0:21,0:21:63.22:0,63,1280	0/0:12,0:12:36.11:0,36,683	0/0:50,0:50:99:0,151,3032	0/0:21,0:21:63.20:0,63,1243	0/0:20,0:20:60.21:0,60,1209	1/1:0,20:20:57.19:929,57,0	0/0:26,0:26:78.27:0,78,1571	1/1:32,0:30:83.56:629,84,0	1/1:0,32:32:93.32:1516,93,0	0/0:22,0:22:63.17:0,63,1222	0/0:12,0:12:33.11:0,33,670	0/0:52,0:52:99:0,156,3121	0/0:18,0:18:54.19:0,54,1071	0/0:15,0:15:42.14:0,42,853	0/0:46,0:46:99:0,138,2776	1/1:0,26:26:69.24:1126,69,0	1/1:24,0:23:65.18:449,65,0	1/1:21,0:21:44.76:336,45,0	1/1:8,0:8:23.86:178,24,0
chr10	4491482	.	CTCTT	C	1720.68	PASS	AB=0.958;AC=29;AF=0.558;AN=52;BaseQRankSum=2.642;DP=601;FS=1.309;HRun=0;HaplotypeScore=121.2661;InbreedingCoeff=0.5667;MQ=56.70;MQ0=12;MQRankSum=-1.508;QD=5.09;ReadPosRankSum=0.903;VQSLOD=2.3066;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:38:14.23:0,14,183	0/0:11,0:11:18.06:0,18,399	./.	./.	0/0:30,0:30:42.10:0,42,826	1/1:15,8:23:12.04:182,12,0	1/1:16,1:16:3.01:45,3,0	0/1:34,0:33:0:0,0,0	1/1:6,8:14:3.01:46,3,0	0/0:27,0:25:33.04:0,33,615	0/0:20,0:20:21.07:0,21,479	1/1:13,0:33:23.86:207,24,0	1/1:11,0:17:2.80:13,3,0	1/1:9,0:22:12.01:111,12,0	0/1:13,0:13:13.42:44,0,13	1/1:8,0:16:15.02:140,15,0	0/0:40,0:39:66.14:0,66,1145	0/1:28,0:27:2.89:23,0,3	0/1:14,5:16:1.79:126,0,2	1/1:4,7:11:18.06:274,18,0	1/1:9,3:10:9.03:137,9,0	1/1:9,12:21:24:365,24,0	1/1:10,3:13:1.97:34,2,0	1/1:11,9:20:6.02:91,6,0	0/1:25,0:25:39.57:66,0,40	0/0:27,0:27:44.96:0,45,775	0/0:20,0:20:28.33:0,28,450	0/0:13,0:13:9.03:0,9,151
chr10	4491527	.	TC	T	311.43	PASS	AB=0.807;AC=3;AF=0.054;AN=56;BaseQRankSum=6.863;DP=514;FS=0.816;HRun=1;HaplotypeScore=81.5191;InbreedingCoeff=-0.0640;MQ=59.34;MQ0=14;MQRankSum=-4.220;QD=5.88;ReadPosRankSum=-1.687;VQSLOD=-0.1529;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:27:42.10:0,42,565	0/0:7,0:7:21.07:0,21,317	0/0:19,0:10:23.03:0,23,261	0/0:3,0:2:5.99:0,6,63	0/0:23,0:23:66.22:0,66,992	0/0:16,0:16:24.61:0,25,306	0/0:13,0:13:36.99:0,37,496	0/0:30,0:23:65.97:0,66,826	0/0:12,0:12:12.91:0,13,152	0/0:18,0:17:51.16:0,51,722	0/0:18,0:18:51.13:0,51,722	0/0:37,0:37:53.36:0,53,645	0/0:18,0:18:38.96:0,39,475	0/0:19,0:19:14.73:0,15,191	0/1:9,2:11:78.69:79,0,201	0/0:14,0:14:16.75:0,17,214	0/0:38,0:38:99:0,111,1649	0/1:18,3:20:99:133,0,451	0/0:19,0:14:35.04:0,35,395	0/0:16,0:15:29.40:0,29,351	0/0:10,0:8:16.50:0,16,164	0/0:19,0:19:32.01:0,32,308	0/0:11,0:11:28.88:0,29,335	0/0:15,0:15:16.63:0,17,189	0/1:12,9:21:99:200,0,265	0/0:22,0:22:63.20:0,63,919	0/0:28,0:28:84.25:0,84,1174	0/0:8,0:8:24.06:0,24,317
chr10	4492320	.	A	AC	5451.13	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-15.945;DP=851;FS=0.348;HRun=4;HaplotypeScore=79.4026;InbreedingCoeff=0.9999;MQ=78.18;MQ0=0;MQRankSum=-2.044;QD=36.10;ReadPosRankSum=2.100;VQSLOD=4.9875;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,33:34:84.28:1148,84,0	0/0:24,0:24:72.21:0,72,816	0/0:30,0:30:84.20:0,84,929	0/0:28,0:28:69.15:0,69,750	0/0:35,0:35:96.26:0,96,1079	0/0:39,0:39:99:0,108,1220	0/0:24,0:24:66.17:0,66,738	0/0:25,0:25:66.16:0,66,725	0/0:30,0:30:87.23:0,87,976	0/0:48,0:48:99:0,137,1529	0/0:17,0:17:51.11:0,51,558	0/0:40,0:40:99:0,108,1225	0/0:35,0:35:99:0,105,1171	0/0:41,0:41:99:0,123,1359	1/1:1,43:44:99:1718,126,0	0/0:41,0:41:99:0,117,1318	1/1:2,12:14:33.11:451,33,0	1/1:1,23:23:60.20:821,60,0	0/0:24,0:24:66.12:0,66,702	0/0:30,0:30:90.24:0,90,1011	0/0:27,0:27:78.21:0,78,874	0/0:30,0:30:87.23:0,87,972	0/0:25,0:25:69.20:0,69,782	0/0:26,0:26:72.20:0,72,817	1/1:1,34:35:96.32:1313,96,0	0/0:42,0:42:99:0,123,1369	0/0:25,0:25:72.21:0,72,817	0/0:14,0:14:36.10:0,36,408
chr10	4495083	.	A	AG	5485.89	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-7.489;DP=452;FS=6.925;HRun=2;HaplotypeScore=45.5414;InbreedingCoeff=0.9194;MQ=82.83;MQ0=0;MQRankSum=-4.372;QD=36.82;ReadPosRankSum=2.497;VQSLOD=5.1455;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,16:17:42.14:604,42,0	0/0:6,0:6:18.06:0,18,218	0/0:20,0:20:48.14:0,48,579	0/0:10,0:10:24.05:0,24,271	0/0:5,0:5:2.68:0,3,37	0/0:9,0:9:27.04:0,27,317	0/0:40,0:40:99:0,120,1431	1/1:1,25:26:72.21:984,72,0	0/0:15,0:15:42.13:0,42,520	0/0:11,0:11:30.09:0,30,372	0/0:3,0:3:6.02:0,6,74	0/0:39,0:39:99:0,111,1362	0/0:9,0:9:27.04:0,27,310	0/0:21,0:21:60.16:0,60,718	1/1:1,16:17:48.16:689,48,0	0/0:9,0:9:27.08:0,27,334	1/1:1,21:22:48.16:691,48,0	1/1:0,26:26:66.22:946,66,0	0/0:16,0:15:42.13:0,42,509	0/0:4,0:4:6.02:0,6,72	0/0:54,0:54:99:0,153,1877	0/0:5,0:5:12.02:0,12,136	0/0:3,0:3:9.03:0,9,111	0/0:24,0:24:72.18:0,72,874	1/1:3,13:16:42.10:580,42,0	1/1:1,9:10:27.09:388,27,0	1/1:0,10:10:30.10:431,30,0	1/1:1,4:5:12.04:173,12,0
chr10	4495171	.	TTTCCTTCC	T	1505.68	PASS	AB=1.000;AC=13;AF=0.250;AN=52;BaseQRankSum=3.725;DP=457;FS=0.717;HRun=0;HaplotypeScore=111.3609;InbreedingCoeff=0.7285;MQ=53.60;MQ0=18;MQRankSum=-2.224;QD=14.62;ReadPosRankSum=3.853;VQSLOD=2.3924;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:24.03:0,24,438	0/0:3,0:3:3.01:0,3,45	./.	./.	0/0:6,0:6:3.01:0,3,41	0/1:18,0:18:37.17:37,0,60	0/0:34,0:33:25.33:0,25,174	0/0:29,0:26:2.97:0,3,20	0/0:9,0:9:18.01:0,18,376	0/0:16,0:15:17.80:0,18,461	0/0:12,0:12:18.06:0,18,508	0/0:24,0:23:27.09:0,27,899	0/0:13,0:11:20.43:0,20,428	0/0:21,0:21:33.10:0,33,990	1/1:9,3:11:21.06:403,21,0	0/0:12,0:12:21.07:0,21,615	0/0:17,0:16:11.92:0,12,92	1/1:15,1:16:18.06:297,18,0	0/0:18,0:17:12.76:0,13,155	0/0:5,0:5:6.02:0,6,127	0/0:37,0:35:30.06:0,30,692	0/0:7,0:7:9.03:0,9,317	0/0:10,0:10:18.02:0,18,418	0/0:23,0:23:39.11:0,39,1191	1/1:15,3:17:21.07:373,21,0	1/1:9,8:16:23.46:329,23,0	1/1:8,0:8:12.04:170,12,0	1/1:14,0:13:6.01:70,6,0
chr10	4495700	.	C	CT	2069.75	PASS	AB=1.000;AC=43;AF=0.860;AN=50;BaseQRankSum=-3.206;DP=163;FS=20.003;HRun=1;HaplotypeScore=77.4279;InbreedingCoeff=0.0469;MQ=48.96;MQ0=3;MQRankSum=-2.521;QD=13.98;ReadPosRankSum=1.484;VQSLOD=1.6733;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:21:41.15:293,41,0	./.	0/1:5,0:3:4.42:13,0,4	0/1:5,0:3:15.53:29,0,16	0/0:7,0:7:0:0,0,0	1/1:2,0:2:5.97:44,6,0	1/1:5,0:5:8.56:53,9,0	1/1:5,0:5:14.93:114,15,0	1/1:6,0:7:10.19:68,10,0	1/1:5,0:5:14.91:110,15,0	1/1:3,0:3:2.98:22,3,0	0/1:6,0:6:11.35:40,0,11	1/1:6,0:6:8.47:56,8,0	1/1:6,0:6:8.96:68,9,0	1/1:0,1:1:3.01:41,3,0	1/1:7,0:6:17.91:134,18,0	1/1:0,5:5:9.03:121,9,0	1/1:1,8:8:21.06:287,21,0	./.	1/1:6,0:6:2.98:22,3,0	0/0:8,0:8:0.47:0,0,1	1/1:6,1:7:2.98:22,3,0	1/1:4,0:4:5.97:44,6,0	1/1:15,0:15:2.63:23,3,0	1/1:0,5:5:6.02:72,6,0	1/1:0,6:6:18.06:257,18,0	1/1:0,7:7:18.06:237,18,0	./.
chr10	4495703	.	CTAA	C	1553.16	PASS	AB=1.000;AC=42;AF=0.875;AN=48;BaseQRankSum=-1.172;DP=167;FS=27.361;HRun=0;HaplotypeScore=83.1108;InbreedingCoeff=0.2869;MQ=52.78;MQ0=3;MQRankSum=-1.547;QD=10.57;ReadPosRankSum=1.534;VQSLOD=1.6210;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:21:34.85:171,35,0	./.	0/0:6,0:5:5.96:0,6,20	0/0:6,0:4:0.85:0,1,23	./.	1/1:2,0:2:5.49:24,5,0	1/1:5,0:5:3.47:21,3,0	0/1:5,0:5:1.67:37,0,2	1/1:7,0:7:2.20:27,2,0	1/1:5,0:5:13.07:51,13,0	1/1:3,0:3:2.80:13,3,0	1/1:6,0:6:2.37:8,2,0	1/1:6,0:6:3.63:15,4,0	1/1:6,0:6:4.59:22,5,0	1/1:0,1:1:3.01:47,3,0	1/1:8,0:7:12.67:69,13,0	1/1:0,5:5:9.03:139,9,0	1/1:1,8:8:21.07:322,21,0	./.	1/1:6,0:6:2.74:12,3,0	1/1:8,0:8:0.47:1,0,0	1/1:6,1:7:2.80:13,3,0	1/1:4,0:4:5.54:24,6,0	0/1:15,0:15:0:0,0,0	1/1:0,5:5:6.02:82,6,0	1/1:0,6:6:18.06:287,18,0	1/1:0,7:7:18.06:271,18,0	./.
chr10	4496820	.	T	TTGGCCTCAGG	5274.04	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-1.494;DP=761;FS=1.360;HRun=0;HaplotypeScore=219.8849;InbreedingCoeff=0.9697;MQ=81.76;MQ0=0;MQRankSum=-9.928;QD=117.20;ReadPosRankSum=-0.828;VQSLOD=5.0809;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:14,28:45:99:5274,105,0	0/0:11,0:11:30.10:0,30,971	0/0:19,0:19:36.07:0,36,993	0/0:24,0:24:63.17:0,63,1633	0/0:19,0:19:57.17:0,57,1678	0/0:27,0:27:75.24:0,75,2347	0/0:33,0:33:93.32:0,93,2919	0/0:30,0:30:81.28:0,81,2491	0/0:33,0:33:93.29:0,93,2737	0/0:21,0:21:60.16:0,60,1942	0/0:23,0:23:60.19:0,60,1862	0/0:42,0:42:99:0,114,3458	0/0:27,0:27:72.18:0,72,2092	0/0:27,0:27:78.25:0,78,2359	0/0:21,0:21:60.21:0,60,1866	0/0:43,0:43:99:0,123,3868	0/0:33,0:33:96.33:0,96,3000	0/0:25,0:25:75.26:0,75,2427	0/0:23,0:23:66.23:0,66,2046	0/0:20,0:20:60.21:0,60,1847	0/0:58,0:58:99:0,169,5320	0/0:30,0:30:84.29:0,84,2682	0/0:17,0:17:45.14:0,45,1385	0/0:35,0:35:99:0,99,3109	0/0:24,0:24:72.24:0,72,2147	0/0:17,0:17:51.18:0,51,1607	0/0:30,0:30:75.21:0,75,2199	0/0:4,0:4:12.04:0,12,387
chr10	4497792	.	ACT	A	156.39	PASS	AB=0.863;AC=2;AF=0.036;AN=56;BaseQRankSum=4.545;DP=665;FS=3.458;HRun=0;HaplotypeScore=80.1981;InbreedingCoeff=-0.0322;MQ=58.47;MQ0=5;MQRankSum=-2.797;QD=3.33;ReadPosRankSum=-2.391;VQSLOD=1.1439;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,114,2190	0/0:14,0:14:42.14:0,42,811	0/1:13,6:13:99:230,0,320	0/1:27,1:16:3.79:4,0,684	0/0:19,0:19:45.15:0,45,846	0/0:22,0:22:63.22:0,63,1216	0/0:34,0:34:99:0,99,1912	0/0:38,0:38:96.33:0,96,1833	0/0:20,0:20:57.20:0,57,1082	0/0:14,0:13:39.12:0,39,721	0/0:5,0:5:15.05:0,15,281	0/0:34,0:34:99:0,99,1814	0/0:29,0:29:87.28:0,87,1635	0/0:27,0:27:81.28:0,81,1546	0/0:21,0:21:57.18:0,57,1067	0/0:21,0:21:63.22:0,63,1216	0/0:40,0:40:99:0,117,2188	0/0:19,0:19:54.18:0,54,1009	0/0:22,0:21:60.19:0,60,1063	0/0:26,0:26:65.77:0,66,1241	0/0:26,0:26:78.27:0,78,1488	0/0:12,0:12:30.10:0,30,564	0/0:9,0:9:21.07:0,21,404	0/0:41,0:41:99:0,123,2375	0/0:16,0:16:45.14:0,45,820	0/0:20,0:20:60.21:0,60,1147	0/0:34,0:33:99:0,102,1872	0/0:14,0:14:42.14:0,42,811
chr10	4498540	.	G	GT	1136.26	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-6.323;DP=640;FS=8.767;HRun=4;HaplotypeScore=65.1914;InbreedingCoeff=0.9342;MQ=89.76;MQ0=0;MQRankSum=-2.372;QD=32.46;ReadPosRankSum=2.081;VQSLOD=4.0951;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:90.25:0,90,1019	0/0:10,0:10:30.09:0,30,340	0/0:23,0:23:66.16:0,66,728	0/0:25,0:25:63.09:0,63,697	0/0:10,0:10:23.26:0,23,270	0/0:29,0:29:84.24:0,84,952	0/0:28,0:28:81.20:0,81,897	0/0:32,0:32:81.19:0,81,893	0/0:24,0:24:72.21:0,72,817	0/0:15,0:15:39.11:0,39,443	0/0:10,0:10:20.22:0,20,217	0/0:34,0:34:93.25:0,93,1044	0/0:22,0:22:66.19:0,66,749	0/0:21,0:21:60.17:0,60,680	0/0:33,0:33:90.18:0,90,1020	0/0:42,0:42:99:0,111,1259	1/1:5,30:35:90.30:1231,90,0	0/0:16,0:16:45.13:0,45,509	0/0:22,0:22:57.13:0,57,628	0/0:13,0:13:36.10:0,36,401	0/0:32,0:32:87.25:0,87,986	0/0:12,0:12:33.09:0,33,374	0/0:6,0:6:9.02:0,9,102	0/0:32,0:32:93.26:0,93,1054	0/0:19,0:19:42.08:0,42,453	0/0:23,0:23:60.17:0,60,680	0/0:29,0:29:75.20:0,75,840	0/0:7,0:7:21.03:0,21,225
chr10	4499426	.	T	TTG	4128.88	PASS	AB=0.750;AC=9;AF=0.161;AN=56;BaseQRankSum=-4.750;DP=765;FS=8.412;HRun=0;HaplotypeScore=126.7125;InbreedingCoeff=0.8295;MQ=55.85;MQ0=12;MQRankSum=-1.846;QD=23.87;ReadPosRankSum=-0.578;VQSLOD=3.7685;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:33:9.53:0,10,111	0/0:8,0:8:21.05:0,21,233	0/0:26,0:6:6.02:0,6,72	0/0:32,0:11:20.92:0,21,199	0/0:33,0:32:72.18:0,72,837	0/0:23,0:23:51.94:0,52,618	0/0:30,0:30:71.94:0,72,792	1/1:22,24:42:37.29:894,37,0	0/0:27,0:27:69.16:0,69,779	0/0:28,0:29:56.98:0,57,638	0/0:25,0:25:54.16:0,54,640	0/0:33,0:33:81.23:0,81,959	0/0:17,0:16:42.12:0,42,492	0/0:22,0:22:57.17:0,57,674	0/0:28,0:28:47.16:0,47,577	0/0:19,0:20:48.13:0,48,559	1/1:16,15:33:25.26:891,25,0	0/0:25,0:25:45.06:0,45,507	0/0:22,0:18:34.89:0,35,385	0/0:20,0:20:39.11:0,39,456	0/0:44,0:45:99:0,120,1381	0/0:21,0:21:54.14:0,54,623	0/0:17,0:17:27.08:0,27,323	0/0:28,0:30:28.37:0,28,690	0/0:25,0:25:51.03:0,51,610	1/1:17,4:21:30.09:427,30,0	1/1:16,21:37:78.13:1194,78,0	0/1:24,12:36:53.77:724,0,54
chr10	4499466	.	A	ATGTGTG	2364.45	PASS	AB=0.844;AC=14;AF=0.250;AN=56;BaseQRankSum=5.574;DP=810;FS=18.952;HRun=0;HaplotypeScore=197.3633;InbreedingCoeff=0.7830;MQ=51.04;MQ0=22;MQRankSum=-5.023;QD=9.93;ReadPosRankSum=-1.702;VQSLOD=1.4429;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:27:8.38:0,8,76	0/0:10,0:11:21.06:0,21,378	0/0:58,0:7:3.01:0,3,31	0/0:69,0:12:5.98:0,6,94	0/0:24,0:28:46.01:0,46,806	0/0:21,0:21:35.86:0,36,627	0/0:23,0:24:42.60:0,43,814	1/1:38,0:35:35.82:546,36,0	0/0:23,0:26:54.18:0,54,1048	0/0:25,0:26:51.15:0,51,955	0/0:25,0:26:57.08:0,57,1094	0/0:27,0:29:54.18:0,54,1099	0/0:17,0:17:39.13:0,39,792	0/0:21,0:24:57.19:0,57,1116	1/1:16,17:40:18.06:410,18,0	0/0:24,0:27:63.20:0,63,1232	0/1:14,0:24:0.45:0,0,192	1/1:18,2:20:12.51:281,13,0	0/0:15,0:13:15.05:0,15,310	0/0:15,0:16:27.96:0,28,524	0/0:56,0:56:90.29:0,90,1774	0/0:18,0:18:24.04:0,24,440	0/0:15,0:17:36.10:0,36,654	0/0:36,0:37:57.87:0,58,1144	0/1:18,12:33:13.76:33,0,14	1/1:8,0:23:39.26:558,39,0	1/1:18,0:28:14.19:196,14,0	1/1:16,0:30:41.74:524,42,0
chr10	4500272	.	ATG	A	259.40	PASS	AB=0.917;AC=5;AF=0.089;AN=56;BaseQRankSum=6.085;DP=691;FS=3.986;HRun=0;HaplotypeScore=95.6362;InbreedingCoeff=0.3907;MQ=59.89;MQ0=8;MQRankSum=-0.857;QD=2.85;ReadPosRankSum=0.838;VQSLOD=2.1099;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:11.40:0,11,108	0/0:5,0:5:12.04:0,12,193	0/0:50,0:25:41.15:0,41,590	0/0:43,0:23:30.67:0,31,512	0/0:32,1:33:47.08:0,47,1233	0/0:23,1:23:23.01:0,23,880	0/0:28,0:28:60.20:0,60,979	0/1:29,2:31:17.19:17,0,774	0/0:15,0:15:45.15:0,45,730	0/0:18,0:17:48.16:0,48,780	0/1:13,2:15:1.05:1,0,475	0/0:28,1:29:78.27:0,78,1269	0/0:13,0:13:36.12:0,36,572	0/0:26,1:27:41.19:0,41,1188	0/0:23,0:23:63.22:0,63,1022	0/0:20,1:21:19.99:0,20,821	1/1:28,4:31:30.01:346,30,0	0/0:24,1:25:22.99:0,23,856	0/0:18,0:17:39.13:0,39,633	0/0:24,0:24:63.21:0,63,1018	0/0:44,1:45:37.23:0,37,1543	0/0:12,0:12:33.10:0,33,510	0/1:12,1:13:1.07:1,0,503	0/0:34,0:34:81.28:0,81,1315	0/0:24,3:27:26.82:0,27,948	0/0:35,0:35:90.30:0,90,1446	0/0:17,0:17:3.95:0,4,555	0/0:16,0:16:38.96:0,39,599
chr10	4500291	.	C	CGT	609.79	PASS	AB=0.833;AC=3;AF=0.054;AN=56;BaseQRankSum=4.693;DP=690;FS=2.112;HRun=0;HaplotypeScore=100.5163;InbreedingCoeff=0.6831;MQ=59.58;MQ0=9;MQRankSum=-0.961;QD=13.55;ReadPosRankSum=-0.044;VQSLOD=3.1592;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:8,2:10:8.45:82,0,8	0/0:5,0:5:12.04:0,12,158	0/0:45,0:20:49:0,49,605	0/0:40,0:19:16.52:0,17,266	0/0:29,0:29:69.17:0,69,858	0/0:21,0:20:51.16:0,51,664	0/0:24,0:24:66.18:0,66,835	0/0:29,0:29:81.21:0,81,1028	0/0:18,0:18:51.17:0,51,668	0/0:17,0:17:42.13:0,42,540	0/0:15,0:15:30.10:0,30,394	0/0:26,0:26:69.20:0,69,877	0/0:14,0:14:39.13:0,39,512	0/0:29,0:29:75.24:0,75,985	0/0:27,0:27:69.22:0,69,907	0/0:20,0:20:54.15:0,54,679	1/1:31,4:33:39.13:634,39,0	0/0:24,0:24:57.18:0,57,743	0/0:14,0:13:33.11:0,33,434	0/0:24,0:24:69.21:0,69,892	0/0:54,0:54:99:0,147,1928	0/0:13,0:13:36.10:0,36,458	0/0:18,0:18:48.14:0,48,611	0/0:41,0:41:99:0,114,1459	0/0:30,0:30:66.21:0,66,867	0/0:31,0:32:70.48:0,70,983	0/0:19,0:19:45.09:0,45,557	0/0:16,0:16:31.34:0,31,396
chr10	4500491	.	A	ATAT	3032.60	PASS	AB=0.545;AC=9;AF=0.161;AN=56;BaseQRankSum=2.768;DP=500;FS=0.987;HRun=0;HaplotypeScore=93.5883;InbreedingCoeff=0.8429;MQ=73.86;MQ0=3;MQRankSum=-4.000;QD=34.46;ReadPosRankSum=1.578;VQSLOD=4.3590;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:14.97:0,15,167	0/0:11,0:11:33.10:0,33,544	0/0:20,0:15:41.90:0,42,603	0/0:17,0:14:33:0,33,420	0/0:21,0:21:54.17:0,54,895	0/0:8,0:8:21.07:0,21,369	0/0:20,0:20:57.15:0,57,900	0/1:4,0:23:37.32:64,0,37	0/0:14,0:14:42.10:0,42,706	0/0:22,0:22:63.20:0,63,1043	0/0:15,0:15:45.15:0,45,764	0/0:19,0:19:54.13:0,54,879	0/0:11,0:11:27.08:0,27,419	0/0:18,0:18:51.17:0,51,898	1/1:0,18:18:51.18:1154,51,0	0/0:18,0:18:54.12:0,54,815	1/1:12,0:12:8.11:147,8,0	1/1:0,12:12:33.11:747,33,0	0/0:14,0:13:36.12:0,36,599	0/0:24,0:24:69.20:0,69,1125	0/0:16,0:16:45.12:0,45,711	0/0:12,0:12:36.12:0,36,608	0/0:18,0:18:51.17:0,51,893	0/0:27,0:27:69.23:0,69,1187	1/1:0,22:21:48.16:1080,48,0	0/0:20,0:20:60.16:0,60,930	0/0:21,0:21:60.17:0,60,942	0/0:14,0:14:42.13:0,42,709
chr10	4500492	.	T	TA	901.36	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=8.821;DP=498;FS=0.539;HRun=1;HaplotypeScore=83.2049;InbreedingCoeff=0.9874;MQ=72.18;MQ0=3;MQRankSum=-4.545;QD=14.31;ReadPosRankSum=2.440;VQSLOD=3.2267;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:13.96:0,14,129	0/0:11,0:11:33.09:0,33,423	0/0:21,0:15:41.99:0,42,471	0/0:16,0:12:32.96:0,33,352	0/0:20,0:20:54.16:0,54,713	0/0:8,0:8:21.07:0,21,293	0/0:20,0:20:57.10:0,57,730	0/0:26,0:25:60.51:0,61,347	0/0:14,0:14:42.10:0,42,563	0/0:22,0:22:63.19:0,63,831	0/0:15,0:15:45.14:0,45,609	0/0:18,0:18:54.12:0,54,708	0/0:11,0:11:27.07:0,27,346	0/0:17,0:17:51.17:0,51,712	1/1:18,0:18:50.25:325,50,0	0/0:19,0:19:54.15:0,54,685	1/1:5,7:12:20.04:240,20,0	1/1:12,0:12:15.65:190,16,0	0/0:14,0:13:39.10:0,39,511	0/0:24,0:24:68.40:0,68,878	0/0:16,0:16:45.12:0,45,580	0/0:12,0:12:36.11:0,36,488	0/0:18,0:18:51.17:0,51,710	0/0:27,0:27:69.09:0,69,921	1/1:21,0:20:47.30:305,47,0	0/0:20,0:20:60.15:0,60,769	0/0:22,0:22:60.16:0,60,766	0/0:14,0:14:42.13:0,42,566
chr10	4500501	.	AAGAT	A	1852.99	PASS	AC=26;AF=0.520;AN=50;BaseQRankSum=7.172;DP=477;FS=4.292;HRun=0;HaplotypeScore=102.5010;InbreedingCoeff=0.8183;MQ=64.90;MQ0=9;MQRankSum=-1.640;QD=8.16;ReadPosRankSum=2.253;VQSLOD=1.7042;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:30:6.82:46,7,0	0/0:6,0:10:9.03:0,9,157	./.	./.	0/0:12,0:25:33.10:0,33,547	1/1:5,3:8:6.02:91,6,0	0/0:16,0:16:9:0,9,119	./.	0/0:11,0:12:15.03:0,15,283	0/0:20,0:20:24.06:0,24,470	0/0:19,0:19:24.07:0,24,507	0/0:16,0:16:9.02:0,9,165	0/0:5,0:10:6.01:0,6,77	0/0:18,0:18:12.04:0,12,277	1/1:17,0:17:6.01:56,6,0	0/0:17,0:17:39.12:0,39,857	1/1:9,0:9:2.94:28,3,0	1/1:12,0:12:2.94:18,3,0	1/1:8,7:13:21.07:318,21,0	1/1:12,11:24:33.06:456,33,0	0/0:14,0:14:20.94:0,21,409	0/0:11,0:11:12.04:0,12,277	1/1:12,9:20:21.07:318,21,0	1/1:16,12:28:18.06:272,18,0	1/1:17,0:16:9.01:84,9,0	1/1:15,0:15:9.01:83,9,0	1/1:18,0:18:18.02:167,18,0	1/1:13,0:13:12.01:112,12,0
chr10	4500502	.	AGATAGATAGAT	A	1014.72	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=7.118;DP=469;FS=0.757;HRun=0;HaplotypeScore=162.0401;InbreedingCoeff=0.5725;MQ=64.03;MQ0=9;MQRankSum=-5.336;QD=12.08;ReadPosRankSum=1.306;VQSLOD=2.7695;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:1,29:30:12.04:365,12,0	0/0:9,0:9:18.06:0,18,589	0/0:18,0:11:29.39:0,29,308	0/0:12,0:7:16.82:0,17,158	0/0:25,0:25:60.18:0,60,2076	0/0:8,0:8:21.07:0,21,390	0/0:15,0:15:42.08:0,42,917	0/0:29,0:24:62.22:0,62,340	0/0:11,0:11:33.09:0,33,1018	0/0:20,0:20:57.18:0,57,1866	0/0:19,0:19:54.18:0,54,1822	0/0:16,0:16:48.15:0,48,1100	0/0:10,0:10:17.75:0,18,427	0/0:19,0:19:57.18:0,57,1397	0/1:17,0:17:92.99:167,0,93	0/0:17,0:17:51.17:0,51,2413	1/1:6,0:9:20.31:223,20,0	0/1:12,0:12:54.83:65,0,55	0/0:15,0:13:39.13:0,39,779	0/0:23,0:23:63:0,63,1333	0/0:15,0:15:45.15:0,45,1656	0/0:11,0:11:33.11:0,33,961	0/0:21,0:20:51.02:0,51,1031	0/0:27,0:27:60.19:0,60,1092	0/1:16,0:16:1.75:333,0,2	0/0:14,0:14:32.88:0,33,387	0/0:17,0:17:17.55:0,18,312	0/0:13,0:13:26.35:0,26,272
chr10	4500980	.	GACGCTGAAAGCTACT	G	1546.27	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.768;DP=729;FS=22.193;HRun=0;HaplotypeScore=285.0938;InbreedingCoeff=0.9949;MQ=84.92;MQ0=0;MQRankSum=-5.802;QD=55.22;ReadPosRankSum=2.552;VQSLOD=1.4652;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:66,0:66:99:0,193,12407	0/0:7,0:7:21.07:0,21,1512	0/0:22,0:22:63.22:0,63,3498	0/0:25,0:25:69.71:0,70,3809	0/0:13,0:13:36.11:0,36,2066	0/0:22,0:22:63.22:0,63,4479	0/0:25,0:25:75.24:0,75,5198	0/0:33,0:33:93.32:0,93,6155	0/0:16,0:16:45.15:0,45,3289	0/0:26,0:26:75.25:0,75,4939	0/0:10,0:10:30.10:0,30,1953	0/0:31,0:31:90.31:0,90,5964	0/0:32,0:32:93.30:0,93,6046	0/0:23,0:23:66.23:0,66,4808	0/0:40,0:40:99:0,120,7976	0/0:34,0:34:99:0,102,7018	1/1:7,21:26:36.12:1641,36,0	0/0:29,0:29:87.30:0,87,5984	0/0:22,0:22:66.23:0,66,4520	0/0:14,0:14:39.12:0,39,2417	0/0:53,0:53:99:0,160,10638	0/0:11,0:11:33.11:0,33,1933	0/0:15,0:15:45.13:0,45,2852	0/0:42,0:42:99:0,123,8955	0/0:22,0:22:66.23:0,66,4691	0/0:21,0:21:60.19:0,60,3805	0/0:29,0:29:84.29:0,84,5939	0/0:18,0:18:48.16:0,48,3437
chr10	4501676	.	CGCTGCTGCT	C	767.94	PASS	AB=0.775;AC=5;AF=0.093;AN=54;BaseQRankSum=6.552;DP=485;FS=2.015;HRun=0;HaplotypeScore=141.9314;InbreedingCoeff=0.2277;MQ=67.75;MQ0=1;MQRankSum=-6.615;QD=12.80;ReadPosRankSum=-0.170;VQSLOD=2.8293;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:6,20:26:33.07:830,33,0	0/0:7,0:7:11.95:0,12,415	0/0:9,0:8:18.05:0,18,327	0/0:17,0:17:22.46:0,22,623	0/0:3,0:3:3.01:0,3,61	0/0:12,0:12:24.08:0,24,802	0/0:35,0:35:81.28:0,81,3055	0/0:15,0:15:26.11:0,26,733	0/0:20,0:20:42.14:0,42,1723	0/0:8,0:8:12.51:0,13,339	0/0:7,0:7:3:0,3,25	0/0:32,0:33:75.26:0,75,2846	0/0:15,0:15:27.09:0,27,1052	0/0:26,0:26:66.23:0,66,2566	0/0:9,0:9:24.08:0,24,1054	0/0:18,0:18:48.15:0,48,1718	0/0:19,0:19:22.46:0,22,502	0/0:32,0:33:96.31:0,96,3885	0/0:24,0:24:43.77:0,44,1335	0/0:4,0:4:6.02:0,6,181	0/0:55,0:54:99:0,108,3785	./.	0/0:4,0:4:3.01:0,3,64	0/0:37,0:38:90.30:0,90,3552	0/0:11,0:11:15.05:0,15,421	0/1:13,0:17:11.29:11,0,593	0/1:9,0:12:26.69:27,0,425	0/1:3,0:5:19.01:19,0,185
chr10	4501688	.	T	TCC	474.90	PASS	AB=0.828;AC=3;AF=0.054;AN=56;BaseQRankSum=4.599;DP=509;FS=6.568;HRun=1;HaplotypeScore=90.4413;InbreedingCoeff=-0.0648;MQ=62.27;MQ0=2;MQRankSum=-4.239;QD=10.79;ReadPosRankSum=-1.410;VQSLOD=-0.2000;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:38.07:0,38,247	0/0:5,0:5:11.80:0,12,195	0/0:12,0:9:24.08:0,24,379	0/0:15,0:15:37.58:0,38,477	0/0:3,0:3:9.03:0,9,132	0/0:15,0:15:45.12:0,45,672	0/0:31,0:31:93.32:0,93,1509	0/0:14,0:14:42.13:0,42,631	0/0:22,0:22:63.16:0,63,945	0/0:8,0:8:21.53:0,22,302	0/0:5,0:4:12.01:0,12,147	0/0:40,0:40:99:0,111,1678	0/0:14,0:14:39.06:0,39,604	0/0:26,0:26:75.23:0,75,1174	0/0:13,0:13:39.11:0,39,589	0/0:19,0:19:57.18:0,57,905	0/0:24,0:24:26.59:0,27,451	0/0:34,0:34:99:0,99,1587	0/0:25,0:25:72.23:0,72,1129	0/0:5,0:5:12.02:0,12,170	0/0:53,0:52:99:0,144,2273	0/0:7,0:7:15.04:0,15,220	0/0:5,0:5:11.60:0,12,195	0/0:37,0:37:99:0,102,1635	0/0:7,0:7:21.07:0,21,342	0/1:18,2:21:99:199,0,434	0/1:9,7:16:99:336,0,145	0/1:6,1:7:39.58:40,0,221
chr10	4501715	.	GTTCCC	G	591.57	PASS	AB=0.802;AC=3;AF=0.054;AN=56;BaseQRankSum=6.219;DP=542;FS=10.289;HRun=0;HaplotypeScore=117.1383;InbreedingCoeff=0.0558;MQ=60.58;MQ0=1;MQRankSum=-6.130;QD=15.57;ReadPosRankSum=-0.104;VQSLOD=2.5719;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:75.26:0,75,2017	0/0:4,0:4:6.49:0,6,169	0/0:13,0:7:20.43:0,20,522	0/0:16,0:16:48.15:0,48,1364	0/0:2,0:2:6.02:0,6,150	0/0:16,0:16:45.15:0,45,1404	0/0:39,0:39:99:0,117,3728	0/0:9,0:9:24.08:0,24,798	0/0:23,0:23:66.22:0,66,2122	0/0:9,0:9:21.07:0,21,694	0/0:3,0:3:6.02:0,6,199	0/0:38,0:38:99:0,114,3494	0/0:18,0:18:54.19:0,54,1758	0/0:29,0:29:87.30:0,87,2795	0/0:14,0:14:42.14:0,42,1397	0/0:21,0:21:63.22:0,63,2039	0/0:34,0:33:90.31:0,90,1971	0/0:42,0:42:99:0,123,3807	0/0:16,0:15:42.14:0,42,1212	0/0:7,0:7:21.07:0,21,674	0/0:57,0:57:99:0,172,5225	0/0:10,0:9:27.09:0,27,875	0/0:6,0:6:15.05:0,15,481	0/0:35,0:35:99:0,99,3055	0/0:13,0:13:37.37:0,37,1145	0/1:12,1:13:99:155,0,444	0/1:13,4:17:99:224,0,720	0/1:4,4:8:5.12:312,0,5
chr10	4501737	.	CCTG	C	325.92	PASS	AB=0.773;AC=3;AF=0.054;AN=56;BaseQRankSum=4.626;DP=553;FS=2.809;HRun=0;HaplotypeScore=93.7892;InbreedingCoeff=0.4013;MQ=62.34;MQ0=1;MQRankSum=-1.930;QD=12.54;ReadPosRankSum=0.144;VQSLOD=2.8665;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:66.23:0,66,1342	0/0:2,0:2:3.01:0,3,59	0/0:11,0:9:27.08:0,27,518	0/0:17,0:17:32.31:0,32,568	0/0:6,0:6:18.06:0,18,366	0/0:17,0:17:42.13:0,42,869	0/0:32,0:32:87.27:0,87,1761	0/0:7,0:7:21.07:0,21,385	0/0:30,0:30:66.23:0,66,1408	0/0:15,0:15:30.10:0,30,650	0/0:5,0:5:6.02:0,6,130	0/0:36,0:36:99:0,105,2149	0/0:24,0:24:69.21:0,69,1385	0/0:34,0:34:96.32:0,96,1985	0/0:18,0:18:54.19:0,54,1162	0/0:16,0:16:42.14:0,42,909	0/0:36,0:35:96.29:0,96,2003	0/0:40,0:40:99:0,114,2313	0/0:9,0:8:21.07:0,21,455	0/0:8,0:8:15.04:0,15,284	0/0:53,0:53:99:0,126,2614	0/0:10,0:9:18.03:0,18,308	0/0:4,0:4:3.01:0,3,65	0/0:41,0:41:99:0,117,2371	0/0:13,0:13:30.10:0,30,630	1/1:3,6:9:9.34:219,9,0	0/1:12,5:17:23.14:204,0,23	0/0:7,0:7:5.95:0,6,49
chr10	4502303	.	AGAGGGAGAC	A	3125.46	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.738;DP=796;FS=2.142;HRun=0;HaplotypeScore=226.3040;InbreedingCoeff=0.9788;MQ=77.96;MQ0=0;MQRankSum=-9.326;QD=72.69;ReadPosRankSum=1.428;VQSLOD=3.2475;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,138,6654	0/0:13,0:13:39.13:0,39,1778	0/0:15,0:15:39.13:0,39,1652	0/0:21,0:21:53.89:0,54,2110	0/0:17,0:17:42.62:0,43,1874	0/0:15,0:15:45.15:0,45,2066	0/0:33,0:33:99:0,99,4376	0/0:34,0:34:93.32:0,93,4210	0/0:35,0:35:93.31:0,93,4161	0/0:29,0:29:87.30:0,87,4095	0/0:15,0:15:42.14:0,42,1877	0/0:36,0:36:99:0,108,4854	0/0:31,0:31:90.27:0,90,3768	0/0:43,0:43:99:0,123,5503	0/0:44,0:44:99:0,129,5854	0/0:31,0:31:93.32:0,93,3955	0/0:48,0:48:99:0,138,5317	0/0:18,0:18:54.15:0,54,2502	0/0:23,0:23:66.13:0,66,2526	0/0:20,0:20:57.18:0,57,2449	0/0:70,0:70:99:0,202,8958	0/0:33,0:33:96.32:0,96,4096	0/0:16,0:16:45.11:0,45,2062	0/0:35,0:35:99:0,99,4427	0/0:31,0:31:87.30:0,87,3959	1/1:2,21:23:60.21:1832,60,0	1/1:0,15:15:42.14:1178,42,0	1/1:1,4:5:9.03:253,9,0
chr10	4502978	.	TG	T	751.75	PASS	AB=0.785;AC=35;AF=0.795;AN=44;BaseQRankSum=-4.856;DP=195;FS=0.000;HRun=1;HaplotypeScore=59.7383;InbreedingCoeff=0.4662;MQ=24.71;MQ0=52;MQRankSum=0.983;QD=5.65;ReadPosRankSum=-0.496;VQSLOD=0.1229;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,1:5:9.30:44,9,0	./.	./.	./.	./.	1/1:2,2:4:10.53:66,11,0	1/1:7,0:5:13.05:65,13,0	1/1:4,0:3:0.11:0,0,0	1/1:7,0:7:1.24:50,1,0	0/1:7,1:8:0.28:1,0,0	0/1:2,2:4:0:0,0,0	1/1:12,0:12:25.87:140,26,0	1/1:9,2:10:9.19:46,9,0	1/1:7,0:7:12.90:60,13,0	1/1:10,0:10:21.45:127,21,0	1/1:9,0:9:18.85:90,19,0	1/1:3,0:2:1.50:5,2,0	0/0:5,0:1:1.55:0,2,4	1/1:8,1:6:0.07:15,0,0	0/1:3,1:4:0.36:0,0,0	./.	1/1:5,2:7:8.23:41,8,0	0/0:7,3:9:7.37:0,7,35	1/1:5,0:2:4.80:27,5,0	1/1:5,0:5:13.25:66,13,0	1/1:5,1:6:0.67:15,1,0	0/0:11,0:10:6.42:0,6,18	./.
chr10	4502988	.	T	TG	2982.64	PASS	AB=0.500;AC=43;AF=0.977;AN=44;BaseQRankSum=1.026;DP=194;FS=0.000;HRun=2;HaplotypeScore=50.3375;InbreedingCoeff=0.3489;MQ=24.78;MQ0=51;MQRankSum=-1.732;QD=18.76;ReadPosRankSum=-0.353;VQSLOD=3.3976;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,5:5:7.43:80,7,0	./.	./.	./.	./.	1/1:0,4:4:9.29:58,9,0	1/1:2,5:5:14.64:101,15,0	1/1:2,3:3:9.03:141,9,0	1/1:0,7:7:20.90:242,21,0	1/1:0,8:8:23.57:336,24,0	1/1:0,4:4:0.47:1,0,0	1/1:0,12:12:30.06:267,30,0	1/1:0,11:10:15.32:129,15,0	1/1:0,7:7:12.34:118,12,0	1/1:0,10:10:21.19:222,21,0	1/1:0,9:9:24.37:260,24,0	1/1:1,2:2:0.13:0,0,0	1/1:4,1:1:3.01:48,3,0	1/1:2,6:6:18.06:255,18,0	0/1:0,4:4:0.38:0,0,0	./.	1/1:0,7:7:6.96:85,7,0	1/1:1,9:9:9.48:92,9,0	1/1:3,2:2:3.48:35,3,0	1/1:0,5:5:9.80:78,10,0	1/1:0,6:6:15.05:210,15,0	1/1:1,10:10:20.85:300,21,0	./.
chr10	4504515	.	GCCTTTC	G	3227.04	PASS	AB=0.549;AC=5;AF=0.089;AN=56;BaseQRankSum=9.265;DP=741;FS=3.209;HRun=0;HaplotypeScore=155.0211;InbreedingCoeff=0.7775;MQ=78.01;MQ0=1;MQRankSum=-9.952;QD=47.46;ReadPosRankSum=1.339;VQSLOD=3.6921;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,117,3941	0/0:7,0:7:18.06:0,18,628	0/0:21,0:21:51.14:0,51,1554	0/0:32,0:30:74.39:0,74,2062	0/0:19,0:19:54.17:0,54,1762	0/0:33,0:33:93.27:0,93,2795	0/0:27,0:27:75.19:0,75,2300	0/0:29,0:29:75.24:0,75,2342	0/0:26,0:26:72.24:0,72,2373	0/0:19,0:19:54.19:0,54,1861	0/0:19,0:19:57.20:0,57,1933	0/0:42,0:42:99:0,123,4247	0/0:24,0:24:66.22:0,66,2219	0/0:23,0:23:60.18:0,60,1822	0/0:30,0:30:84.25:0,84,2589	0/0:19,0:19:51.18:0,51,1774	0/0:43,0:43:99:0,120,3856	0/0:30,0:30:78.23:0,78,2323	0/0:27,0:27:72.24:0,72,2337	0/0:15,0:15:45.15:0,45,1568	0/0:65,0:65:99:0,178,6015	0/0:16,0:16:45.15:0,45,1538	0/0:23,0:23:63.21:0,63,2106	0/0:22,0:22:63.22:0,63,2197	0/0:18,0:18:54.17:0,54,1727	0/1:5,23:28:99:1404,0,159	1/1:2,23:25:57.06:1200,57,0	1/1:0,15:15:33.11:753,33,0
chr10	4504718	.	G	GC	1188.88	PASS	AB=0.938;AC=3;AF=0.054;AN=56;BaseQRankSum=-6.752;DP=691;FS=1.345;HRun=6;HaplotypeScore=81.8523;InbreedingCoeff=0.7808;MQ=77.81;MQ0=0;MQRankSum=0.647;QD=21.62;ReadPosRankSum=1.761;VQSLOD=2.9137;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,36:40:99:1283,102,0	0/0:12,0:12:30.06:0,30,306	0/0:16,0:16:29.22:0,29,236	0/1:14,0:15:0.24:0,0,144	0/0:18,0:18:51.11:0,51,520	0/0:30,0:30:75.15:0,75,758	0/0:36,0:36:99:0,102,1041	0/0:21,0:21:54.11:0,54,546	0/0:40,0:40:99:0,114,1162	0/0:18,0:18:51.11:0,51,520	0/0:8,0:8:24.04:0,24,238	0/0:45,0:45:99:0,120,1224	0/0:22,0:22:63.14:0,63,642	0/0:33,0:33:93.21:0,93,949	0/0:22,0:22:63.13:0,63,636	0/0:30,0:30:84.19:0,84,857	0/0:24,0:24:69.16:0,69,704	0/0:22,0:22:57.09:0,57,570	0/0:21,0:21:51.10:0,51,510	0/0:12,0:12:33.06:0,33,330	0/0:60,0:60:99:0,171,1729	0/0:18,0:18:51.09:0,51,513	0/0:10,0:10:30.07:0,30,306	0/0:34,0:34:99:0,99,1010	0/0:22,0:22:60.14:0,60,612	0/0:29,0:29:84.19:0,84,856	0/0:26,0:26:69.16:0,69,703	0/0:7,0:7:21.05:0,21,214
chr10	4504773	.	TGG	T	1976.56	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.438;DP=664;FS=0.556;HRun=4;HaplotypeScore=86.2401;InbreedingCoeff=0.9867;MQ=84.13;MQ0=0;MQRankSum=-2.726;QD=34.68;ReadPosRankSum=1.208;VQSLOD=3.0774;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,99,1811	0/0:13,0:13:36.12:0,36,665	0/0:19,0:18:51.17:0,51,865	0/0:23,0:23:54.14:0,54,877	0/0:15,0:15:45.14:0,45,810	0/0:15,0:15:38.86:0,39,727	0/0:36,0:36:99:0,102,1856	0/0:26,0:26:72.23:0,72,1283	0/0:40,0:40:99:0,120,2238	0/0:18,0:18:54.19:0,54,1003	0/0:4,0:4:12.04:0,12,220	0/0:36,0:36:99:0,105,1963	0/0:25,0:25:75.25:0,75,1358	0/0:34,0:34:99:0,99,1805	0/0:17,0:17:48.16:0,48,899	0/0:36,0:36:99:0,108,1980	0/0:25,0:25:69.21:0,69,1252	0/0:18,0:18:48.16:0,48,899	0/0:16,0:16:45.12:0,45,774	0/0:7,0:7:21.07:0,21,392	0/0:70,0:70:99:0,205,3807	0/0:11,0:11:30.10:0,30,562	0/0:8,0:8:24.08:0,24,449	0/0:37,0:37:99:0,108,1981	0/0:24,0:24:72.25:0,72,1341	1/1:0,21:21:57.19:840,57,0	1/1:1,23:24:51.17:750,51,0	1/1:0,12:12:36.12:529,36,0
chr10	4505584	.	AC	A	1243.59	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=8.525;DP=620;FS=10.634;HRun=1;HaplotypeScore=80.8529;InbreedingCoeff=0.9660;MQ=84.60;MQ0=0;MQRankSum=-2.530;QD=34.54;ReadPosRankSum=3.523;VQSLOD=3.1206;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,105,1646	0/0:9,0:9:27.05:0,27,398	0/0:18,0:18:54.18:0,54,834	0/0:21,0:22:27.17:0,27,690	0/0:15,0:15:36.12:0,36,569	0/0:19,0:19:54.18:0,54,863	0/0:28,0:28:81.28:0,81,1293	0/0:22,0:22:57.18:0,57,875	0/0:17,0:17:51.13:0,51,782	0/0:23,0:23:69.23:0,69,1079	0/0:14,0:14:36.07:0,36,523	0/0:31,0:31:87.26:0,87,1363	0/0:16,0:16:48.16:0,48,766	0/0:26,0:26:78.25:0,78,1218	0/0:29,0:29:87.30:0,87,1384	0/0:21,0:21:60.19:0,60,930	1/1:2,34:36:12.50:1330,12,0	0/0:34,0:34:96.33:0,96,1528	0/0:18,0:18:51.15:0,51,769	0/0:18,0:18:42.11:0,42,646	0/0:52,0:52:99:0,150,2329	0/0:16,0:16:45.15:0,45,715	0/0:18,0:18:48.09:0,48,680	0/0:34,0:34:99:0,102,1604	0/0:10,0:10:24.08:0,24,383	0/0:13,0:13:33.11:0,33,521	0/0:15,0:15:45.15:0,45,712	0/0:10,0:10:27.09:0,27,430
chr10	4505721	.	GA	G	2602.09	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=8.479;DP=639;FS=6.709;HRun=2;HaplotypeScore=69.5568;InbreedingCoeff=0.9806;MQ=82.95;MQ0=0;MQRankSum=-1.914;QD=32.12;ReadPosRankSum=1.068;VQSLOD=3.3062;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,141,2105	0/0:6,0:6:18.06:0,18,270	0/0:27,0:27:72.06:0,72,927	0/0:16,0:16:25.72:0,26,384	0/0:19,0:19:51.16:0,51,744	0/0:22,0:22:66.22:0,66,988	0/0:32,0:32:90.28:0,90,1308	0/0:27,0:27:75.25:0,75,1116	0/0:22,0:22:66.22:0,66,989	0/0:25,0:25:75.25:0,75,1120	0/0:14,0:14:42.14:0,42,630	0/0:27,0:27:81.27:0,81,1213	0/0:16,0:16:48.16:0,48,719	0/0:29,0:29:87.29:0,87,1302	0/0:24,0:24:69.21:0,69,994	0/0:22,0:22:66.22:0,66,970	1/1:0,32:32:81.26:1052,81,0	0/0:21,0:21:63.20:0,63,923	0/0:17,0:17:48.16:0,48,708	0/0:17,0:17:51.16:0,51,744	0/0:55,0:55:99:0,166,2415	0/0:13,0:13:39.12:0,39,560	0/0:16,0:16:45.15:0,45,673	0/0:28,0:28:81.09:0,81,1213	0/0:16,0:16:48.16:0,48,719	1/1:1,33:34:57.35:1239,57,0	1/1:0,12:12:27.09:350,27,0	1/1:0,3:3:9.03:117,9,0
chr10	4505926	.	CAACAACAACAACA	C	1641.12	PASS	AB=0.667;AC=7;AF=0.125;AN=56;BaseQRankSum=7.660;DP=694;FS=0.785;HRun=0;HaplotypeScore=250.8716;InbreedingCoeff=0.7754;MQ=51.21;MQ0=39;MQRankSum=-6.268;QD=30.39;ReadPosRankSum=-0.170;VQSLOD=2.8279;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:86.86:0,87,1605	0/0:10,0:10:30.09:0,30,1623	0/0:34,0:9:21.07:0,21,574	0/0:60,0:15:35.78:0,36,1176	0/0:27,0:27:81.24:0,81,3589	0/0:22,0:22:66.20:0,66,3318	0/0:26,0:26:75.20:0,75,3664	0/0:33,0:31:67.12:0,67,2362	0/0:22,0:22:66.23:0,66,3557	0/0:36,0:36:95.72:0,96,4539	0/0:14,0:14:39.13:0,39,2035	0/0:37,0:37:99:0,111,5961	0/0:17,0:16:48.16:0,48,2827	0/0:22,0:22:59.57:0,60,3309	0/0:20,0:20:51.17:0,51,1077	0/0:35,0:35:99:0,105,5460	1/1:14,1:17:13.38:315,13,0	0/0:18,0:18:51.16:0,51,888	0/0:14,0:12:32.60:0,33,1488	0/0:25,0:24:66.23:0,66,3773	0/0:48,0:45:99:0,132,5902	0/0:17,0:17:51.16:0,51,2477	0/0:18,0:18:54.17:0,54,2674	0/0:35,0:35:93.32:0,93,4846	0/0:16,0:16:47.48:0,47,842	0/1:10,9:20:99:916,0,360	1/1:4,6:10:5.72:204,6,0	1/1:2,5:6:12.04:341,12,0
chr10	4505935	.	CAACA	C	1533.87	PASS	AB=0.906;AC=13;AF=0.232;AN=56;BaseQRankSum=8.521;DP=715;FS=15.713;HRun=0;HaplotypeScore=145.5914;InbreedingCoeff=0.4009;MQ=48.26;MQ0=47;MQRankSum=-6.082;QD=9.08;ReadPosRankSum=-0.490;VQSLOD=2.0135;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:28,1:34:18.51:253,0,19	0/0:11,0:11:29.75:0,30,668	0/0:49,0:10:23.43:0,23,245	0/0:71,0:10:19.83:0,20,315	0/0:27,1:28:15.75:0,16,1401	0/0:23,0:23:67.43:0,67,1353	0/0:25,0:25:69.23:0,69,1544	0/1:33,0:31:62.17:62,0,230	0/0:20,0:20:57.13:0,57,1328	0/0:36,0:36:83.50:0,84,1849	0/0:13,0:13:36.12:0,36,807	0/0:36,0:36:99:0,101,2367	0/0:17,0:16:47.37:0,47,1168	0/0:20,0:20:55.40:0,55,1289	1/1:12,7:20:18.02:316,18,0	0/0:37,0:37:99:0,105,2224	0/1:15,0:15:13.49:29,0,13	1/1:10,6:17:11.69:402,12,0	0/0:21,0:19:0.06:0,0,637	0/0:25,0:24:66.21:0,66,1492	0/0:50,0:47:99:0,132,2663	0/0:17,0:17:50.38:0,50,1076	0/0:13,0:13:36.11:0,36,855	0/0:34,0:34:90.30:0,90,2032	0/1:8,7:15:11.84:225,0,12	0/1:20,0:20:99:251,0,155	1/1:7,0:7:4.31:53,4,0	1/1:8,0:7:5.15:105,5,0
chr10	4505957	.	CACAT	C	878.53	PASS	AB=0.875;AC=13;AF=0.232;AN=56;BaseQRankSum=11.364;DP=823;FS=23.955;HRun=0;HaplotypeScore=159.3609;InbreedingCoeff=0.6748;MQ=45.96;MQ0=56;MQRankSum=-6.568;QD=5.56;ReadPosRankSum=-2.086;VQSLOD=0.6203;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:35,0:34:2.63:50,0,3	0/0:10,0:10:27.06:0,27,615	0/0:77,0:10:30.01:0,30,552	0/0:90,0:10:16.67:0,17,171	0/0:27,0:27:72.08:0,72,1593	0/0:24,0:24:62.66:0,63,1248	0/0:31,0:30:77.07:0,77,1660	0/0:31,0:28:71.46:0,71,1352	0/0:19,0:19:51.12:0,51,1127	0/0:32,0:32:84.35:0,84,1835	0/0:15,0:15:42.06:0,42,706	0/0:28,0:28:72.08:0,72,1734	0/0:19,0:19:55.02:0,55,1211	0/0:27,0:26:41.24:0,41,1074	1/1:19,6:24:8.39:85,8,0	0/0:40,0:40:99:0,110,1978	1/1:20,0:20:2.66:113,3,0	0/1:14,2:16:27.03:218,0,27	0/0:19,0:18:25.32:0,25,683	0/0:24,0:23:60.19:0,60,1472	0/0:75,0:73:99:0,144,3180	0/0:18,0:18:43.21:0,43,1190	0/0:12,0:12:27.06:0,27,585	0/0:47,0:47:99:0,108,2072	1/1:13,6:18:8.96:93,9,0	1/1:21,1:21:12.71:252,13,0	0/1:9,5:14:5.51:102,0,6	1/1:4,3:7:8.57:130,9,0
chr10	4505959	.	CAT	C	1303.74	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=12.783;DP=811;FS=17.682;HRun=0;HaplotypeScore=133.2002;InbreedingCoeff=0.9225;MQ=45.99;MQ0=52;MQRankSum=-6.591;QD=8.36;ReadPosRankSum=-0.949;VQSLOD=1.9234;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:35,0:34:11.36:75,11,0	0/0:10,0:10:22.23:0,22,422	0/0:75,0:10:26.97:0,27,418	0/0:88,0:10:14.03:0,14,172	0/0:27,0:27:59.71:0,60,1219	0/0:25,0:25:61.69:0,62,948	0/0:30,0:29:73.89:0,74,1209	0/0:31,0:28:55.78:0,56,902	0/0:20,0:20:38.88:0,39,823	0/0:32,0:32:47.13:0,47,1284	0/0:14,0:14:38.95:0,39,534	0/0:28,0:28:72.56:0,73,1319	0/0:20,0:20:26.05:0,26,851	0/0:25,0:24:38.26:0,38,832	1/1:19,5:23:5.38:44,5,0	0/0:39,0:39:13.50:0,14,1412	1/1:16,0:19:23.43:123,23,0	1/1:10,6:16:6.67:348,7,0	0/0:18,0:17:15.65:0,16,505	0/0:24,0:23:48.75:0,49,1084	0/0:74,0:72:93.03:0,93,2300	0/0:18,0:18:31.29:0,31,819	0/0:10,0:10:24.07:0,24,426	0/0:47,0:47:99:0,103,1494	1/1:15,4:18:8.86:88,9,0	1/1:15,7:21:55.03:521,55,0	1/1:13,1:14:8.57:102,9,0	1/1:5,2:7:15.05:193,15,0
chr10	4505960	.	ATG	A	1264.29	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=11.820;DP=789;FS=22.245;HRun=0;HaplotypeScore=127.7047;InbreedingCoeff=0.8394;MQ=46.24;MQ0=50;MQRankSum=-7.115;QD=8.84;ReadPosRankSum=-0.435;VQSLOD=1.8500;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:28:1.06:124,0,1	0/0:8,0:9:9.59:0,10,412	0/0:75,0:10:27.01:0,27,474	0/0:86,0:10:8.51:0,9,233	0/0:26,1:27:71.95:0,72,1299	0/0:25,0:25:52.57:0,53,1060	0/0:27,1:27:74.99:0,75,1328	0/0:30,1:28:38.37:0,38,1154	0/0:20,0:20:54.69:0,55,882	0/0:30,1:31:38.42:0,38,1427	0/0:14,0:14:36.10:0,36,610	0/0:28,0:28:77.73:0,78,1405	0/0:20,0:20:14.49:0,14,886	0/0:25,0:24:7.99:0,8,886	1/1:12,11:22:5.95:46,6,0	0/0:37,2:39:10.98:0,11,1669	1/1:5,11:16:24.45:245,24,0	1/1:13,0:13:24.54:210,25,0	0/0:17,1:17:1.21:0,1,519	0/0:24,0:23:60.04:0,60,1131	0/0:71,1:70:35.61:0,36,2556	0/0:18,0:18:29.05:0,29,896	0/0:10,0:10:24.07:0,24,437	0/0:46,0:46:99:0,113,1771	1/1:17,2:18:8.75:77,9,0	1/1:18,3:20:43.03:455,43,0	1/1:13,2:15:20.80:176,21,0	1/1:6,0:7:14.92:120,15,0
chr10	4505971	.	GAC	G	268.15	PASS	AB=0.930;AC=10;AF=0.185;AN=54;BaseQRankSum=4.103;DP=788;FS=6.955;HRun=0;HaplotypeScore=134.2624;InbreedingCoeff=-0.1171;MQ=46.87;MQ0=36;MQRankSum=2.498;QD=0.96;ReadPosRankSum=1.521;VQSLOD=2.2051;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:35:3.06:0,3,22	0/0:10,0:10:6.02:0,6,90	./.	0/0:70,0:9:2.98:0,3,21	0/0:24,0:24:21.03:0,21,267	0/0:26,0:26:15.22:0,15,328	0/0:24,0:25:0.13:0,0,403	0/0:37,0:34:35.96:0,36,376	0/0:20,0:20:30.10:0,30,449	0/0:28,0:29:17.64:0,18,431	0/1:13,1:14:6.11:6,0,291	0/1:24,2:26:35.75:36,0,331	0/0:22,0:23:15.46:0,15,357	0/1:23,1:24:44.30:44,0,368	0/0:24,0:23:1.77:0,2,5	0/1:32,4:37:36.28:36,0,709	0/1:17,0:17:20.17:20,0,31	0/0:18,0:18:9.82:0,10,67	1/1:14,0:11:2.60:10,3,0	0/0:22,0:22:9.03:0,9,123	0/1:83,6:86:99:192,0,1079	0/0:20,0:20:31.65:0,32,403	0/1:12,1:13:16.55:17,0,167	0/1:39,6:45:38.06:38,0,657	0/0:23,0:22:4.22:0,4,24	0/0:23,0:23:33.38:0,33,475	0/0:16,0:16:24.06:0,24,303	0/0:8,0:8:15.04:0,15,192
chr10	4506166	.	A	AC	2644.18	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-10.094;DP=707;FS=2.821;HRun=4;HaplotypeScore=67.5471;InbreedingCoeff=0.9989;MQ=91.74;MQ0=0;MQRankSum=-4.423;QD=36.72;ReadPosRankSum=1.518;VQSLOD=4.0535;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,32:34:99:1338,99,0	0/0:8,0:8:24.07:0,24,272	0/0:34,0:34:87.06:0,87,951	0/0:26,0:26:66.13:0,66,722	0/0:32,0:32:90.26:0,90,1020	0/0:21,0:21:57.15:0,57,639	0/0:30,0:30:81.20:0,81,906	0/0:28,0:28:72.17:0,72,791	0/0:20,0:20:60.10:0,60,656	0/0:32,0:32:87.25:0,87,987	0/0:21,0:21:63.18:0,63,714	0/0:25,0:25:72.19:0,72,807	0/0:22,0:22:66.17:0,66,737	0/0:21,0:21:63.12:0,63,676	0/0:28,0:28:81.21:0,81,907	0/0:23,0:23:69.17:0,69,765	1/1:3,35:38:99:1428,105,0	0/0:32,0:32:93.24:0,93,1041	0/0:17,0:17:45.12:0,45,503	0/0:24,0:24:72.19:0,72,806	0/0:31,0:31:84.22:0,84,942	0/0:27,0:27:78.21:0,78,875	0/0:18,0:18:54.15:0,54,612	0/0:27,0:27:81.22:0,81,907	0/0:19,0:19:54.15:0,54,612	0/0:24,0:24:66.19:0,66,749	0/0:30,0:28:81.23:0,81,918	0/0:15,0:15:45.13:0,45,509
chr10	4506546	.	TTG	T	362.41	PASS	AB=0.971;AC=23;AF=0.442;AN=52;BaseQRankSum=1.234;DP=865;FS=19.422;HRun=0;HaplotypeScore=341.1343;InbreedingCoeff=-0.2286;MQ=52.43;MQ0=18;MQRankSum=-3.366;QD=0.63;ReadPosRankSum=-2.633;VQSLOD=0.1562;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:32,0:29:2.74:12,3,0	0/1:13,1:14:10.77:11,0,95	1/1:29,0:24:0.89:2,1,0	./.	0/1:43,0:43:32.80:33,0,34	1/1:13,0:13:5.21:23,5,0	0/0:27,0:27:7.71:0,8,63	./.	0/0:26,0:25:16.12:0,16,144	0/0:35,0:35:1.63:0,2,84	0/1:24,0:24:14.38:26,0,14	0/1:46,0:46:22.05:22,0,102	0/0:24,0:24:9.81:0,10,86	0/1:33,0:30:0.01:11,0,0	0/1:34,1:35:19.79:20,0,84	0/1:32,1:33:16.54:17,0,125	0/1:23,0:22:1.06:15,0,1	0/1:11,6:15:31.51:54,0,32	0/0:26,0:23:3.89:0,4,28	0/1:48,0:46:51.35:109,0,51	0/0:51,5:53:2.97:0,3,20	0/1:46,0:46:25.35:25,0,115	0/1:34,0:35:35.43:41,0,35	0/0:34,0:34:2.75:0,3,133	0/1:31,2:33:43.61:44,0,145	0/1:36,0:35:1.51:4,0,2	1/1:16,0:15:3.42:30,3,0	0/1:18,0:17:1.92:2,0,19
chr10	4506579	.	TG	T	4799.83	PASS	AB=0.916;AC=26;AF=0.464;AN=56;BaseQRankSum=17.629;DP=1068;FS=4.568;HRun=1;HaplotypeScore=582.8929;InbreedingCoeff=-0.6523;MQ=33.08;MQ0=51;MQRankSum=-9.507;QD=4.86;ReadPosRankSum=3.452;VQSLOD=2.0439;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:25,1:23:27.61:28,0,209	0/1:21,3:24:99:127,0,210	0/1:25,0:2:1.57:2,0,32	0/0:40,0:4:12.04:0,12,150	0/1:63,6:71:43.08:474,0,43	0/1:19,1:19:64.08:75,0,64	0/1:34,1:31:53.76:54,0,375	0/1:23,0:19:61:61,0,300	0/1:24,2:24:79.11:79,0,274	0/1:64,10:71:99:250,0,568	1/1:35,5:42:14.47:290,14,0	0/1:35,9:44:99:187,0,243	0/1:28,1:29:61.40:61,0,595	0/1:32,0:29:56.89:57,0,99	0/1:33,4:37:99:156,0,323	0/1:31,6:36:99:193,0,354	0/1:10,8:16:91.26:156,0,91	0/0:17,1:14:24.50:0,24,278	0/0:22,0:18:36.60:0,37,408	0/1:59,9:65:4.79:577,0,5	0/1:53,1:46:10.34:10,0,253	0/1:63,7:72:54.74:512,0,55	0/1:52,1:54:11.76:489,0,12	0/1:32,0:32:2.89:3,0,275	0/1:50,7:56:99:401,0,367	0/1:37,8:44:99:185,0,577	0/1:15,5:19:99:210,0,200	0/1:19,2:18:99:164,0,226
chr10	4506580	.	G	GT	5018.59	PASS	AB=0.986;AC=25;AF=0.463;AN=54;BaseQRankSum=15.715;DP=1068;FS=10.464;HRun=1;HaplotypeScore=621.6688;InbreedingCoeff=-0.5693;MQ=32.11;MQ0=51;MQRankSum=-7.569;QD=5.40;ReadPosRankSum=3.104;VQSLOD=2.1166;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:22:46.06:46,0,211	0/1:25,0:24:99:155,0,147	./.	0/0:40,0:3:9.03:0,9,113	0/1:70,1:71:46.74:433,0,47	0/1:18,2:19:56.22:88,0,56	0/1:35,0:31:84.21:84,0,310	0/1:24,0:21:99:218,0,224	0/1:26,0:24:72.78:73,0,238	0/1:72,1:71:99:363,0,479	1/1:42,0:42:3.76:310,4,0	0/1:45,0:45:99:204,0,194	0/1:29,0:29:83.48:83,0,522	0/1:29,1:27:72.92:73,0,104	0/1:37,0:37:99:161,0,286	0/1:37,0:36:99:237,0,257	0/1:18,0:16:24.20:24,0,123	0/0:18,0:14:13.18:0,13,250	0/0:21,2:19:14.26:0,14,344	0/1:68,1:66:0.53:512,0,1	0/1:54,0:46:10.89:11,0,243	0/1:71,0:71:30.78:478,0,31	1/1:54,0:53:16.34:487,16,0	0/0:32,0:32:7.53:0,8,261	0/1:58,0:57:99:354,0,328	0/1:44,0:43:99:260,0,424	0/1:20,0:20:99:213,0,175	0/1:19,0:18:99:152,0,228
chr10	4506581	.	TG	T	5768.86	PASS	AB=0.941;AC=25;AF=0.446;AN=56;BaseQRankSum=16.349;DP=1064;FS=3.491;HRun=1;HaplotypeScore=585.2169;InbreedingCoeff=-0.5731;MQ=32.00;MQ0=52;MQRankSum=-8.487;QD=6.38;ReadPosRankSum=3.538;VQSLOD=2.2387;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:22:20.12:20,0,215	0/1:20,4:23:99:161,0,192	0/0:27,0:1:3.01:0,3,37	0/0:40,0:3:9.03:0,9,113	0/1:63,8:71:70.11:601,0,70	0/1:19,1:19:61.46:61,0,68	0/1:33,2:31:86.09:86,0,326	0/1:15,7:20:99:248,0,219	0/1:25,1:24:40.71:41,0,274	0/1:66,7:70:99:322,0,568	1/1:37,5:42:11.48:403,11,0	0/1:44,2:45:99:161,0,250	0/1:27,2:29:61.12:61,0,571	0/1:30,1:28:60.77:61,0,113	0/1:34,2:37:99:121,0,309	0/1:36,1:36:99:253,0,292	0/1:18,0:16:25.63:26,0,117	0/0:18,0:14:25.97:0,26,275	0/0:19,2:17:36.43:0,36,398	0/1:59,10:66:23.61:747,0,24	0/0:54,0:46:6.75:0,7,263	0/1:64,6:70:83.34:693,0,83	1/1:44,9:52:2.94:651,3,0	0/1:31,1:32:4.94:5,0,272	0/1:53,5:57:99:521,0,383	0/1:43,0:42:99:189,0,468	0/1:21,0:20:99:201,0,156	0/1:21,0:18:99:136,0,226
chr10	4506582	.	G	GT	6027.94	PASS	AB=0.993;AC=22;AF=0.393;AN=56;BaseQRankSum=15.732;DP=1062;FS=15.149;HRun=1;HaplotypeScore=604.4933;InbreedingCoeff=-0.5544;MQ=31.77;MQ0=52;MQRankSum=-7.474;QD=7.08;ReadPosRankSum=2.909;VQSLOD=1.8968;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:22:27.67:28,0,225	0/1:24,0:23:99:201,0,150	0/0:27,0:1:3.01:0,3,38	0/0:39,0:2:6.02:0,6,76	0/1:73,1:74:77.35:581,0,77	0/1:20,0:19:59.23:76,0,59	0/1:32,0:28:99:105,0,262	0/1:23,1:20:99:192,0,228	0/1:26,0:24:52.34:52,0,202	0/1:72,1:70:99:408,0,459	0/1:41,0:42:4.42:400,0,4	0/1:44,1:44:99:186,0,225	0/1:28,1:29:70.94:71,0,446	0/1:31,0:28:78.99:79,0,104	0/1:36,0:36:99:170,0,233	0/1:35,1:35:99:292,0,224	0/0:18,0:16:11.04:0,11,173	0/0:18,0:14:13.29:0,13,252	0/0:21,0:17:8.87:0,9,329	0/1:68,0:65:18.91:708,0,19	0/0:54,0:46:0.77:0,1,242	0/1:70,0:70:38.27:663,0,38	1/1:52,0:52:6.52:647,7,0	0/0:31,0:31:14.02:0,14,268	0/1:57,0:56:99:492,0,306	0/1:46,0:45:99:361,0,331	0/1:20,0:19:99:186,0,151	0/1:21,0:18:99:128,0,210
chr10	4506583	.	TG	T	4667.87	PASS	AB=0.997;AC=21;AF=0.375;AN=56;BaseQRankSum=15.450;DP=1052;FS=25.729;HRun=1;HaplotypeScore=586.8191;InbreedingCoeff=-0.4837;MQ=31.61;MQ0=53;MQRankSum=-7.339;QD=5.73;ReadPosRankSum=5.116;VQSLOD=2.1922;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:21:4.92:0,5,229	0/1:24,0:23:99:127,0,195	0/0:32,0:1:3.01:0,3,38	0/0:38,1:2:6.02:0,6,75	0/1:73,0:73:99:481,0,112	0/1:19,0:18:41.62:42,0,74	0/1:32,0:28:75.60:76,0,286	0/1:24,0:20:99:141,0,237	0/1:25,0:23:2.91:3,0,251	0/1:72,0:70:99:333,0,627	0/1:42,0:42:1.51:374,0,2	0/1:45,0:44:70.48:70,0,317	0/1:28,0:28:18.59:19,0,492	0/1:30,0:27:44.39:44,0,119	0/1:34,0:34:56.96:57,0,269	0/1:34,1:34:99:175,0,282	0/0:18,0:16:14.57:0,15,213	0/0:18,0:14:28.34:0,28,291	0/0:22,0:18:35.87:0,36,458	0/1:67,1:65:61.39:692,0,61	0/0:53,0:45:10.11:0,10,262	0/1:69,1:70:85.63:662,0,86	1/1:52,1:52:1.27:638,1,0	0/0:31,0:31:7.39:0,7,284	0/1:56,0:55:99:453,0,351	0/1:44,0:43:99:109,0,487	0/1:19,0:18:91.26:91,0,155	0/1:21,0:18:82.84:83,0,209
chr10	4506584	.	GT	G	1900.74	PASS	AB=0.991;AC=19;AF=0.339;AN=56;BaseQRankSum=15.682;DP=1044;FS=44.236;HRun=1;HaplotypeScore=593.8478;InbreedingCoeff=-0.4788;MQ=31.46;MQ0=53;MQRankSum=-6.384;QD=2.53;ReadPosRankSum=5.323;VQSLOD=-0.5101;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:21:5.22:0,5,256	0/1:24,0:23:28.19:28,0,221	0/0:33,0:1:3.01:0,3,38	0/0:39,0:2:6.02:0,6,75	0/1:73,0:73:99:201,0,122	0/1:18,1:18:23.51:24,0,83	0/0:32,0:28:2.93:0,3,311	0/1:23,0:19:18.09:18,0,282	0/1:25,0:23:11.40:11,0,247	0/1:71,2:70:99:148,0,759	0/1:41,1:42:12.21:180,0,12	0/1:43,0:42:46.88:47,0,371	0/0:26,0:26:3.12:0,3,426	0/1:30,0:27:35.33:35,0,108	0/1:34,0:34:65.71:66,0,279	0/1:35,0:34:73.82:74,0,295	0/0:18,0:16:24.64:0,25,236	0/0:18,0:14:28.51:0,29,311	0/0:22,0:18:47.42:0,47,543	0/1:65,3:65:70.28:313,0,70	0/0:53,0:45:3.82:0,4,256	0/1:70,0:70:99:342,0,120	1/1:51,2:52:1.18:305,1,0	0/0:27,0:28:6.47:0,6,282	0/1:55,1:55:99:154,0,367	0/1:43,0:42:27.78:28,0,569	0/1:19,0:18:32.30:32,0,170	0/1:21,0:18:46.95:47,0,161
chr10	4506585	.	TG	T	4239.21	PASS	AB=0.906;AC=26;AF=0.464;AN=56;BaseQRankSum=17.007;DP=1033;FS=4.672;HRun=1;HaplotypeScore=582.6333;InbreedingCoeff=-0.4943;MQ=31.37;MQ0=52;MQRankSum=-8.515;QD=4.76;ReadPosRankSum=3.022;VQSLOD=1.9971;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:22,1:21:23.71:24,0,220	0/1:21,3:23:99:102,0,190	0/0:35,0:1:3.01:0,3,38	0/0:39,0:2:6.02:0,6,75	0/1:56,14:71:73.04:277,0,73	0/1:17,1:18:69.83:70,0,70	0/1:29,3:28:29.58:30,0,285	0/1:22,1:19:49.95:50,0,236	0/1:22,3:23:89.21:89,0,245	0/1:58,13:69:99:467,0,637	1/1:32,10:42:7.72:286,8,0	0/1:40,3:42:99:118,0,326	0/1:23,2:25:51.77:52,0,372	0/1:27,2:27:81.59:82,0,94	0/1:28,5:33:99:168,0,253	0/1:32,2:33:99:125,0,259	0/1:17,0:16:27.27:27,0,135	0/0:18,0:14:28.44:0,28,292	0/0:21,1:18:42.81:0,43,479	1/1:58,9:64:42.53:549,43,0	0/1:53,0:45:15.08:15,0,252	0/1:58,12:70:88.94:442,0,89	1/1:45,7:52:11.80:471,12,0	0/0:26,2:28:7.50:0,8,283	0/1:42,13:54:99:284,0,305	0/1:33,7:41:99:228,0,450	0/1:18,1:18:99:127,0,141	0/1:15,3:15:99:158,0,121
chr10	4506587	.	TG	T	7020.37	PASS	AB=0.894;AC=26;AF=0.464;AN=56;BaseQRankSum=15.021;DP=1043;FS=17.569;HRun=1;HaplotypeScore=584.5891;InbreedingCoeff=-0.5346;MQ=31.36;MQ0=51;MQRankSum=-9.866;QD=8.00;ReadPosRankSum=2.110;VQSLOD=1.8888;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:20,3:20:99:99,0,193	0/1:19,5:23:99:165,0,175	0/0:36,0:1:3.01:0,3,38	0/0:38,0:2:6.02:0,6,75	0/1:64,8:72:33.85:612,0,34	0/1:15,4:18:53.86:164,0,54	0/1:28,3:27:99:130,0,264	0/1:28,1:25:99:111,0,308	0/1:24,1:23:75.28:75,0,231	0/1:59,14:70:99:655,0,421	1/1:38,3:41:3.22:395,3,0	0/1:34,9:42:99:272,0,238	0/1:24,1:25:99:156,0,322	0/1:29,1:27:63.28:88,0,63	0/1:32,3:35:99:216,0,237	0/1:31,3:33:99:249,0,259	0/1:9,9:16:84.44:188,0,84	0/0:16,2:14:0.88:0,1,201	0/0:20,2:18:30.61:0,31,409	1/1:49,17:63:49.24:1004,49,0	0/0:51,1:44:2.54:0,3,256	0/1:62,8:70:72.94:617,0,73	1/1:47,6:52:24.83:718,25,0	0/1:29,0:29:5.44:5,0,275	0/1:46,9:54:99:538,0,251	0/1:36,8:44:99:335,0,288	0/1:19,1:19:99:113,0,126	0/1:17,1:15:99:114,0,121
chr10	4506588	.	GT	G	7462.84	PASS	AB=0.949;AC=25;AF=0.446;AN=56;BaseQRankSum=15.198;DP=1045;FS=25.980;HRun=1;HaplotypeScore=590.0030;InbreedingCoeff=-0.4554;MQ=31.22;MQ0=49;MQRankSum=-8.198;QD=8.81;ReadPosRankSum=2.184;VQSLOD=1.7395;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:22:85.07:85,0,200	0/1:20,4:23:99:181,0,169	0/0:38,0:1:3.01:0,3,38	0/0:38,0:2:6.02:0,6,75	0/1:62,7:71:65.12:853,0,65	0/1:18,1:18:49.49:113,0,49	0/1:29,2:27:99:192,0,270	0/1:27,5:29:99:194,0,370	0/1:24,0:23:71.50:72,0,221	0/1:65,7:70:99:482,0,547	1/1:37,3:40:8.18:510,8,0	0/1:40,2:42:99:216,0,281	0/1:23,1:25:99:115,0,342	0/1:28,1:26:56.19:96,0,56	0/1:31,2:34:99:126,0,223	0/1:32,1:33:99:268,0,262	0/1:18,0:16:84.47:84,0,109	0/0:17,0:13:20.41:0,20,204	0/0:20,2:18:13.19:0,13,423	1/1:59,7:63:26.04:1082,26,0	0/0:54,0:46:6.31:0,6,272	0/1:65,5:70:99:881,0,123	1/1:45,8:52:23.60:881,24,0	0/0:28,1:29:2.59:0,3,277	0/1:49,5:53:99:671,0,255	0/1:44,0:44:99:196,0,365	0/1:19,1:19:99:103,0,111	0/1:18,0:15:63.82:64,0,125
chr10	4506589	.	TG	T	6299.31	PASS	AB=0.935;AC=27;AF=0.482;AN=56;BaseQRankSum=16.212;DP=1040;FS=24.993;HRun=1;HaplotypeScore=588.0101;InbreedingCoeff=-0.5370;MQ=31.18;MQ0=48;MQRankSum=-8.523;QD=7.05;ReadPosRankSum=2.779;VQSLOD=1.8839;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:25,1:23:72.67:73,0,183	0/1:24,0:23:99:162,0,160	0/0:38,0:1:3.01:0,3,38	0/0:39,0:2:6.02:0,6,75	0/1:63,8:71:46.31:611,0,46	0/1:18,1:18:59.01:80,0,59	0/1:29,2:27:99:128,0,254	0/1:28,3:28:99:206,0,368	0/1:22,2:23:79.28:79,0,201	0/1:66,7:70:99:497,0,612	1/1:35,4:39:25.30:432,25,0	0/1:39,4:42:99:149,0,314	0/1:24,1:25:97.13:97,0,343	0/1:27,1:25:33.89:66,0,34	0/1:33,1:34:99:126,0,221	0/1:31,4:34:99:182,0,258	0/1:18,0:16:10.41:10,0,112	0/0:17,0:13:15.13:0,15,194	0/1:19,2:18:32.35:32,0,438	1/1:56,10:63:31.65:859,32,0	0/0:52,0:45:17.48:0,17,299	0/1:64,6:70:99:721,0,138	1/1:49,3:51:17.94:682,18,0	0/1:27,1:29:22.20:22,0,273	0/1:50,4:53:99:479,0,270	0/1:38,5:43:99:289,0,471	0/1:15,3:19:99:231,0,117	0/1:18,0:15:82.58:83,0,123
chr10	4506590	.	G	GT	6527.55	PASS	AB=0.988;AC=26;AF=0.464;AN=56;BaseQRankSum=16.983;DP=1044;FS=7.335;HRun=1;HaplotypeScore=611.3836;InbreedingCoeff=-0.4777;MQ=31.04;MQ0=48;MQRankSum=-8.620;QD=7.43;ReadPosRankSum=2.661;VQSLOD=2.0305;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:22:41.52:42,0,165	0/1:23,1:23:99:198,0,127	0/0:38,0:1:3.01:0,3,38	0/0:40,0:2:6.02:0,6,76	0/1:69,2:71:38.37:569,0,38	0/1:19,0:18:53.87:66,0,54	0/1:32,0:28:99:166,0,223	0/1:32,0:29:99:214,0,343	0/1:24,0:23:92.38:92,0,158	0/1:72,0:71:99:656,0,503	1/1:37,2:39:27.26:506,27,0	0/1:41,2:42:99:171,0,261	0/1:25,0:25:87.56:88,0,283	0/1:26,0:26:29.73:87,0,30	0/1:33,0:33:99:121,0,181	0/1:35,0:34:99:221,0,188	0/0:18,0:16:15.52:0,16,163	0/0:16,0:12:12.97:0,13,169	0/1:22,0:18:45.89:46,0,355	1/1:66,0:63:72:852,72,0	0/0:53,0:45:2.67:0,3,288	0/1:68,1:69:99:650,0,122	1/1:50,2:52:44.78:677,45,0	0/1:29,0:29:3.24:3,0,257	0/1:54,0:53:99:415,0,219	0/1:42,1:43:99:441,0,343	0/1:20,0:19:99:177,0,122	0/1:18,0:15:69.70:70,0,127
chr10	4506616	.	GT	G	2838.85	PASS	AB=0.833;AC=22;AF=0.393;AN=56;BaseQRankSum=7.725;DP=907;FS=64.163;HRun=2;HaplotypeScore=553.3544;InbreedingCoeff=-0.6601;MQ=31.77;MQ0=24;MQRankSum=-2.887;QD=3.66;ReadPosRankSum=6.478;VQSLOD=0.6383;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,2:17:18.81:0,19,368	0/1:16,6:22:69.19:69,0,220	0/0:30,2:1:3.01:0,3,45	0/0:34,2:3:6.02:0,6,86	0/1:53,15:68:99:180,0,386	0/1:15,3:17:99:105,0,159	0/1:23,2:22:37.84:38,0,332	0/1:25,8:31:99:189,0,541	0/1:17,6:22:69.42:69,0,353	0/1:49,14:61:99:340,0,1060	0/1:29,7:36:99:99,0,151	0/1:34,10:43:99:109,0,599	0/1:20,3:24:82.99:83,0,395	0/1:24,7:29:60.47:60,0,193	0/1:23,6:29:99:186,0,321	0/1:25,5:30:99:125,0,370	0/0:9,1:10:9.39:0,9,186	0/0:11,1:9:8.74:0,9,298	0/1:16,5:18:66.54:67,0,370	0/1:39,22:60:99:441,0,306	0/1:28,3:26:2.16:2,0,607	0/1:50,10:60:99:256,0,375	0/1:30,13:43:99:235,0,247	0/0:21,3:24:23.04:0,23,393	0/1:34,11:45:99:143,0,487	0/1:29,11:39:99:125,0,769	0/1:15,2:17:62.39:62,0,327	0/1:10,1:10:8.37:8,0,248
chr10	4506617	.	T	TTA	5946.75	PASS	AB=0.902;AC=25;AF=0.446;AN=56;BaseQRankSum=4.511;DP=894;FS=2.211;HRun=0;HaplotypeScore=552.0171;InbreedingCoeff=-0.8357;MQ=31.78;MQ0=20;MQRankSum=-3.060;QD=7.26;ReadPosRankSum=2.691;VQSLOD=3.0615;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:13,4:17:99:136,0,165	0/1:21,1:22:99:177,0,137	0/0:30,1:1:3.01:0,3,46	0/0:34,0:3:5.91:0,6,58	0/1:63,4:68:99:347,0,178	0/1:16,2:17:99:184,0,100	0/1:22,1:22:46.47:46,0,249	0/1:28,5:31:99:256,0,374	0/1:21,1:22:99:209,0,132	0/1:51,9:61:99:520,0,850	0/1:35,0:36:99:216,0,122	0/1:32,9:43:99:529,0,164	0/1:21,2:24:99:151,0,171	0/1:30,1:29:94.84:134,0,95	0/1:24,3:27:99:363,0,162	0/1:23,3:30:99:330,0,160	0/1:5,3:8:47.63:111,0,48	0/1:11,1:9:14.66:15,0,233	0/1:18,3:18:66.20:66,0,232	0/1:54,5:60:99:655,0,151	0/1:26,3:26:99:120,0,294	0/1:57,2:60:99:326,0,114	0/1:42,0:43:99:232,0,199	0/1:23,0:24:17.57:18,0,197	0/1:42,3:45:99:384,0,246	0/1:36,3:38:99:358,0,635	0/1:17,0:17:64.31:64,0,350	0/0:10,0:10:22.07:0,22,285
chr10	4506623	.	GT	G	3678.37	PASS	AB=0.896;AC=22;AF=0.393;AN=56;BaseQRankSum=6.779;DP=762;FS=51.687;HRun=2;HaplotypeScore=494.9907;InbreedingCoeff=-0.6678;MQ=31.32;MQ0=9;MQRankSum=-2.697;QD=5.73;ReadPosRankSum=-2.714;VQSLOD=0.2637;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:13,1:14:21.07:21,0,129	0/1:15,2:17:48.33:48,0,221	0/0:13,1:1:3.01:0,3,45	0/0:20,0:2:5.99:0,6,59	0/1:48,6:54:99:483,0,115	0/1:14,2:15:99:102,0,112	0/1:18,2:18:99:107,0,204	0/0:29,0:27:64.87:0,65,680	0/1:19,1:20:42.96:43,0,156	0/1:49,6:55:99:108,0,1273	0/1:25,8:33:99:172,0,110	0/1:39,3:42:99:221,0,264	0/1:19,1:20:85.25:85,0,145	0/1:27,2:27:82.27:115,0,82	0/1:22,3:25:99:155,0,159	0/1:30,0:30:99:149,0,191	0/1:7,1:8:8.32:8,0,105	0/0:8,1:7:19.31:0,19,286	0/0:18,1:16:23.34:0,23,445	0/1:40,13:53:99:285,0,304	0/0:28,0:24:19.37:0,19,213	0/1:43,7:50:99:651,0,111	0/1:34,6:40:99:331,0,104	0/1:18,0:18:28.88:29,0,31	0/1:25,11:36:99:352,0,193	0/1:30,5:34:79.65:80,0,781	0/1:15,2:17:38.19:38,0,239	0/1:8,2:10:93.80:94,0,201
chr10	4506829	.	G	GA	2976.61	PASS	AB=0.667;AC=45;AF=0.938;AN=48;BaseQRankSum=2.080;DP=205;FS=0.000;HRun=1;HaplotypeScore=200.1470;InbreedingCoeff=0.0779;MQ=25.31;MQ0=43;MQRankSum=-0.287;QD=17.93;ReadPosRankSum=2.339;VQSLOD=3.7030;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,4:5:11.20:81,11,0	1/1:0,1:1:3:25,3,0	./.	./.	1/1:0,5:5:3.47:26,3,0	1/1:0,4:4:11.92:92,12,0	0/1:3,3:5:9.38:36,0,9	1/1:7,0:2:4.35:17,4,0	1/1:5,5:10:23.97:200,24,0	1/1:1,5:5:14.73:113,15,0	0/0:2,1:2:0:0,0,0	1/1:2,13:15:41.96:351,42,0	1/1:1,7:8:1.14:147,1,0	1/1:1,11:12:35.87:288,36,0	1/1:1,8:9:26.96:223,27,0	1/1:2,9:11:29.97:251,30,0	1/1:0,4:4:11.99:101,12,0	1/1:1,6:7:18.01:162,18,0	1/1:4,8:11:32.97:297,33,0	./.	1/1:0,1:1:3:26,3,0	1/1:4,8:11:20.50:149,21,0	1/1:2,3:5:10.34:68,10,0	1/1:5,8:13:24.36:189,24,0	./.	1/1:4,4:7:14.78:116,15,0	1/1:0,2:2:5.99:50,6,0	1/1:1,2:2:6:52,6,0
chr10	4506830	.	G	GA	2573.44	PASS	AB=0.773;AC=44;AF=0.957;AN=46;BaseQRankSum=3.049;DP=213;FS=0.000;HRun=0;HaplotypeScore=188.4734;InbreedingCoeff=0.0724;MQ=25.38;MQ0=44;MQRankSum=-0.537;QD=14.96;ReadPosRankSum=2.686;VQSLOD=4.3527;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,4:7:11.20:81,11,0	1/1:1,1:2:3:25,3,0	./.	./.	1/1:0,5:5:3.47:26,3,0	1/1:0,4:4:11.87:91,12,0	1/1:4,3:6:5.42:23,5,0	0/1:7,0:2:0:0,0,0	1/1:7,5:12:14.99:127,15,0	0/1:1,5:5:22.64:86,0,23	./.	1/1:2,13:15:38.96:326,39,0	1/1:1,7:8:19.87:168,20,0	1/1:1,11:12:32.82:261,33,0	1/1:1,8:9:23.98:200,24,0	1/1:2,9:11:26.90:225,27,0	1/1:0,4:4:11.99:101,12,0	1/1:1,6:7:18.01:162,18,0	1/1:4,8:11:24.03:226,24,0	./.	1/1:0,1:1:3:26,3,0	1/1:4,8:11:20.46:147,20,0	1/1:2,3:5:8.63:61,9,0	1/1:5,8:13:17.16:138,17,0	./.	1/1:4,4:7:11.73:88,12,0	1/1:0,2:2:5.99:50,6,0	1/1:1,2:2:1.93:24,2,0
chr10	4506849	.	CCA	C	2205.31	PASS	AB=0.667;AC=47;AF=0.904;AN=52;BaseQRankSum=2.838;DP=149;FS=12.636;HRun=0;HaplotypeScore=122.9307;InbreedingCoeff=0.2487;MQ=25.53;MQ0=29;MQRankSum=0.574;QD=17.93;ReadPosRankSum=2.456;VQSLOD=3.2432;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,5:5:9:78,9,0	1/1:0,1:1:3:27,3,0	0/0:11,0:1:2.94:0,3,18	./.	1/1:0,1:1:2.84:14,3,0	1/1:0,4:4:9.01:84,9,0	1/1:1,5:5:11.99:104,12,0	1/1:5,2:2:6.01:62,6,0	1/1:0,8:8:9:78,9,0	0/1:2,2:3:44.07:49,0,44	1/1:0,2:2:3.07:11,3,0	1/1:0,7:7:17.98:152,18,0	1/1:0,6:6:17.99:155,18,0	1/1:1,7:7:17.93:143,18,0	1/1:0,7:7:18:160,18,0	1/1:0,7:7:21.01:189,21,0	1/1:0,5:5:9:80,9,0	1/1:0,6:6:15.04:158,15,0	1/1:0,7:7:21.05:226,21,0	1/1:0,2:2:5.80:39,6,0	0/0:0,2:2:1.25:0,1,3	1/1:0,3:3:2.28:45,2,0	1/1:0,1:1:2.04:6,2,0	1/1:0,9:9:9.31:95,9,0	1/1:0,7:7:14.62:150,15,0	1/1:1,6:6:15.02:140,15,0	./.	1/1:0,3:2:6.01:63,6,0
chr10	4506853	.	G	GTTT	6890.92	PASS	AB=0.750;AC=49;AF=0.907;AN=54;BaseQRankSum=2.836;DP=195;FS=19.294;HRun=1;HaplotypeScore=138.6939;InbreedingCoeff=0.3286;MQ=32.08;MQ0=26;MQRankSum=-0.675;QD=40.06;ReadPosRankSum=0.969;VQSLOD=2.8087;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,5:13:36.07:507,36,0	1/1:0,1:1:3.01:52,3,0	0/0:10,0:1:3.01:0,3,42	0/0:13,0:1:2.92:0,3,17	1/1:0,1:1:3.01:32,3,0	1/1:0,4:4:12.04:199,12,0	1/1:7,5:11:30.06:456,30,0	1/1:11,2:9:24:382,24,0	1/1:1,8:9:27.09:412,27,0	0/1:4,2:4:26.73:116,0,27	1/1:0,2:2:5.86:35,6,0	1/1:1,7:8:24.08:401,24,0	1/1:1,6:7:21.07:362,21,0	1/1:3,7:9:27.09:449,27,0	1/1:2,7:9:27.06:427,27,0	1/1:3,7:10:30.10:509,30,0	1/1:1,5:6:12:174,12,0	1/1:1,6:7:18.06:322,18,0	1/1:4,7:11:33.11:612,33,0	1/1:3,2:4:12.04:207,12,0	1/1:1,2:3:3:27,3,0	1/1:0,3:3:9:122,9,0	1/1:1,1:2:2.96:19,3,0	1/1:4,9:13:27.07:396,27,0	1/1:0,7:7:10.91:296,11,0	1/1:1,6:6:15.05:265,15,0	./.	1/1:0,3:2:6.02:113,6,0
chr10	4506910	.	GTTT	G	620.99	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.976;DP=556;FS=30.684;HRun=8;HaplotypeScore=166.8313;InbreedingCoeff=0.9319;MQ=63.18;MQ0=2;MQRankSum=-4.666;QD=21.41;ReadPosRankSum=0.717;VQSLOD=-0.5073;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,21:29:38.24:716,38,0	0/0:9,0:9:24.08:0,24,523	0/0:27,0:19:16.61:0,17,510	0/0:22,0:17:41.60:0,42,638	0/0:27,0:27:78.10:0,78,1479	0/0:10,0:10:30.10:0,30,654	0/0:36,0:36:99:0,99,1940	0/0:16,0:16:36.47:0,36,653	0/0:20,0:20:54.15:0,54,1097	0/0:29,0:29:84.24:0,84,1708	0/0:14,0:14:39.02:0,39,708	0/0:23,0:23:69.20:0,69,1443	0/0:18,0:17:51.14:0,51,1036	0/0:27,0:27:78.08:0,78,1516	0/0:15,0:15:42.07:0,42,823	0/0:26,0:25:74.84:0,75,1578	0/0:18,0:18:52.77:0,53,826	0/0:16,0:16:42.10:0,42,830	0/0:21,0:21:57.17:0,57,1145	0/0:23,0:22:65.99:0,66,1135	0/0:18,0:18:48.12:0,48,1000	0/0:21,0:21:57.07:0,57,1105	0/0:17,0:17:45:0,45,842	0/0:29,0:29:72.72:0,73,1470	0/0:16,0:16:45.07:0,45,907	0/0:14,0:14:39.10:0,39,805	0/0:10,0:10:27.06:0,27,544	0/0:4,0:4:9.03:0,9,164
chr10	4506925	.	G	GT	194.88	PASS	AB=0.972;AC=9;AF=0.161;AN=56;BaseQRankSum=6.059;DP=627;FS=0.000;HRun=11;HaplotypeScore=163.8773;InbreedingCoeff=0.5267;MQ=53.41;MQ0=2;MQRankSum=-3.729;QD=1.71;ReadPosRankSum=-0.386;VQSLOD=0.2287;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:32:1.71:100,2,0	0/1:9,1:11:5.09:5,0,128	0/0:23,0:14:11.83:0,12,81	0/1:19,0:13:13.01:13,0,49	0/0:34,1:37:18.66:0,19,417	0/0:14,0:14:35.84:0,36,277	0/0:34,3:36:13.75:0,14,469	0/0:13,0:13:23.86:0,24,186	0/0:20,0:20:47.77:0,48,370	0/0:34,1:36:65.10:0,65,667	0/0:19,3:22:11.81:0,12,364	0/0:26,0:26:68.68:0,69,533	0/0:21,0:21:49.80:0,50,377	0/0:31,0:31:80.65:0,81,626	0/0:17,0:18:46.86:0,47,353	0/0:25,0:25:64.77:0,65,493	0/0:21,0:22:21.86:0,22,166	0/0:21,0:21:38.71:0,39,297	0/1:27,0:27:1.42:1,0,326	0/0:25,1:25:28.92:0,29,396	0/0:16,2:18:6.25:0,6,221	0/0:25,0:24:58.74:0,59,435	0/0:20,2:22:23.72:0,24,382	0/0:29,3:33:10.32:0,10,409	0/0:17,1:18:14.40:0,14,289	1/1:14,0:14:25.92:111,26,0	1/1:10,0:11:25.06:103,25,0	0/0:3,0:3:2.36:0,2,8
chr10	4506929	.	T	TTG	1653.50	PASS	AB=0.843;AC=6;AF=0.107;AN=56;BaseQRankSum=5.101;DP=645;FS=7.747;HRun=0;HaplotypeScore=169.3140;InbreedingCoeff=0.6859;MQ=51.88;MQ0=2;MQRankSum=-6.045;QD=25.44;ReadPosRankSum=2.173;VQSLOD=4.3133;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:20,15:37:5.27:680,0,5	0/0:11,0:11:29.69:0,30,349	0/0:20,0:11:20.75:0,21,221	0/0:15,0:10:19.29:0,19,221	0/0:39,0:39:99:0,107,1194	0/0:14,0:14:42.06:0,42,583	0/0:37,0:36:98.40:0,98,1234	0/0:12,0:12:33.03:0,33,435	0/0:18,0:18:54.10:0,54,757	0/0:39,0:39:99:0,105,1443	0/0:22,0:22:60.32:0,60,844	0/0:27,0:27:81.12:0,81,1125	0/0:24,0:23:63.04:0,63,821	0/0:31,0:31:93.18:0,93,1304	0/0:19,0:19:54.09:0,54,743	0/0:28,0:27:81.05:0,81,1079	0/0:25,0:25:65.75:0,66,648	0/0:23,0:23:65.95:0,66,783	0/0:27,0:27:62.70:0,63,836	0/0:27,0:26:74.67:0,75,954	0/0:20,0:20:50.66:0,51,641	0/0:26,0:25:72.07:0,72,941	0/0:23,0:23:59.54:0,60,833	0/0:36,0:36:75.64:0,76,988	0/0:17,0:17:50.71:0,51,678	1/1:4,10:14:39.09:603,39,0	1/1:2,8:11:30.10:493,30,0	0/1:3,0:3:12.95:13,0,19
chr10	4506993	.	T	TG	942.38	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=1.652;DP=755;FS=9.657;HRun=0;HaplotypeScore=142.7868;InbreedingCoeff=0.8251;MQ=61.31;MQ0=0;MQRankSum=-2.165;QD=34.90;ReadPosRankSum=3.736;VQSLOD=2.1736;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,120,1630	0/0:14,0:14:33.11:0,33,460	0/0:24,0:21:60.11:0,60,777	0/0:31,0:31:77.76:0,78,1087	0/0:35,0:35:69.16:0,69,930	0/0:12,0:12:27.09:0,27,376	0/0:35,0:35:99:0,99,1381	0/0:28,0:28:81.26:0,81,1118	0/0:24,0:24:72.24:0,72,1005	0/0:28,0:28:78.25:0,78,1072	0/0:28,0:28:72.24:0,72,996	0/0:34,0:34:96.23:0,96,1295	0/0:27,0:27:81.27:0,81,1129	0/0:24,0:24:69.17:0,69,918	0/0:30,0:30:87.18:0,87,1154	0/0:23,0:22:69.23:0,69,961	0/0:35,0:35:99:0,99,1364	0/0:32,0:32:93.22:0,93,1255	0/0:18,0:18:54.17:0,54,733	0/0:29,0:29:75.22:0,75,1024	0/0:36,0:36:99:0,102,1408	0/0:33,0:33:93.31:0,93,1293	0/0:29,0:29:75.19:0,75,1010	0/0:37,0:37:96.32:0,96,1341	0/0:27,0:27:78.15:0,78,1038	1/1:3,12:15:0.25:535,0,0	1/1:1,10:11:30.10:478,30,0	1/1:0,1:1:3.01:48,3,0
chr10	4507050	.	GT	G	192.15	PASS	AC=4;AF=0.074;AN=54;BaseQRankSum=4.877;DP=648;FS=2.870;HRun=5;HaplotypeScore=94.7180;InbreedingCoeff=0.9604;MQ=60.62;MQ0=0;MQRankSum=-4.071;QD=14.78;ReadPosRankSum=0.505;VQSLOD=3.1005;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,132,1729	0/0:9,0:9:18.03:0,18,226	0/0:14,0:14:39.11:0,39,476	0/0:12,0:12:35.98:0,36,427	0/0:21,0:21:57.13:0,57,741	0/0:16,0:16:45.15:0,45,609	0/0:41,0:41:99:0,120,1579	0/0:28,0:28:75.24:0,75,1005	0/0:24,0:24:57.09:0,57,723	0/0:27,0:27:78.26:0,78,1062	0/0:16,0:16:39:0,39,486	0/0:29,0:29:87.28:0,87,1159	0/0:23,0:23:60.16:0,60,780	0/0:22,0:22:63.08:0,63,799	0/0:21,0:21:60.20:0,60,819	0/0:28,0:27:84.22:0,84,1119	0/0:28,0:28:72.14:0,72,925	0/0:24,0:24:63.19:0,63,844	0/0:15,0:15:36.11:0,36,477	0/0:36,0:36:99:0,102,1355	0/0:37,0:37:99:0,108,1474	0/0:32,0:32:90.04:0,90,1133	0/0:25,0:25:66.05:0,66,850	0/0:37,0:37:99:0,99,1313	0/0:23,0:23:69.22:0,69,927	1/1:3,7:10:18.05:202,18,0	1/1:0,3:3:9.03:101,9,0	./.
chr10	4507058	.	GATTA	G	409.14	PASS	AC=4;AF=0.074;AN=54;BaseQRankSum=4.813;DP=642;FS=2.870;HRun=0;HaplotypeScore=119.9522;InbreedingCoeff=0.9626;MQ=60.32;MQ0=0;MQRankSum=-4.318;QD=40.91;ReadPosRankSum=1.421;VQSLOD=3.6558;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,123,3078	0/0:8,0:8:21.07:0,21,574	0/0:17,0:17:51.17:0,51,1303	0/0:14,0:14:42.04:0,42,944	0/0:20,0:20:51.17:0,51,1301	0/0:18,0:18:51.17:0,51,1279	0/0:41,0:41:99:0,117,3095	0/0:30,0:30:87.30:0,87,2330	0/0:20,0:20:57.20:0,57,1490	0/0:29,0:29:87.30:0,87,2372	0/0:16,0:16:45.15:0,45,1067	0/0:30,0:30:81.28:0,81,2170	0/0:23,0:23:69.24:0,69,1821	0/0:21,0:21:63.22:0,63,1630	0/0:22,0:22:66.22:0,66,1649	0/0:30,0:29:87.26:0,87,2262	0/0:25,0:25:66.23:0,66,1792	0/0:22,0:22:63.22:0,63,1705	0/0:13,0:12:36.11:0,36,931	0/0:38,0:38:99:0,114,2881	0/0:37,0:37:99:0,108,2868	0/0:30,0:30:87.26:0,87,2113	0/0:22,0:22:60.20:0,60,1388	0/0:34,0:34:96.33:0,96,2629	0/0:24,0:24:72.21:0,72,1731	1/1:0,7:7:18.06:347,18,0	1/1:0,3:3:9.03:173,9,0	./.
chr10	4508032	.	T	TAGTACCAGC	3771.67	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-1.047;DP=783;FS=3.452;HRun=0;HaplotypeScore=216.0949;InbreedingCoeff=0.9993;MQ=82.65;MQ0=0;MQRankSum=-8.055;QD=53.88;ReadPosRankSum=-4.279;VQSLOD=2.7728;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:27,12:39:48.16:2057,48,0	0/0:14,0:14:33.10:0,33,873	0/0:29,0:29:36.10:0,36,876	0/0:27,0:27:46.92:0,47,1057	0/0:37,0:37:96.33:0,96,2632	0/0:27,0:27:78.26:0,78,2105	0/0:24,0:24:57.18:0,57,1427	1/1:28,3:31:42.13:1714,42,0	0/0:32,0:32:78.27:0,78,2138	0/0:28,0:28:72.24:0,72,1930	0/0:28,0:28:75.26:0,75,2081	0/0:15,0:15:39.12:0,39,1009	0/0:27,0:27:69.24:0,69,1893	0/0:15,0:15:42.12:0,42,1069	0/0:24,0:24:48.16:0,48,1344	0/0:31,0:31:81.28:0,81,2240	0/0:37,0:37:63.22:0,63,1745	0/0:29,0:29:63.22:0,63,1768	0/0:20,0:20:33.11:0,33,873	0/0:34,0:34:81.25:0,81,2144	0/0:36,0:36:78.23:0,78,2010	0/0:31,0:31:72.25:0,72,2026	0/0:22,0:22:57.18:0,57,1553	0/0:31,0:30:78.27:0,78,2127	0/0:31,0:31:81.26:0,81,2190	0/0:34,0:34:72.25:0,72,1972	0/0:38,0:38:93.30:0,93,2555	0/0:12,0:12:30.10:0,30,849
chr10	4508142	.	AT	A	4346.27	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=10.928;DP=628;FS=5.630;HRun=5;HaplotypeScore=64.9363;InbreedingCoeff=0.9994;MQ=89.34;MQ0=0;MQRankSum=-3.040;QD=29.97;ReadPosRankSum=-0.352;VQSLOD=5.1848;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,34:36:84.24:952,84,0	0/0:10,0:10:30.07:0,30,391	0/0:21,0:21:56.68:0,57,703	0/0:29,0:29:83.43:0,83,1036	0/0:18,0:18:48.16:0,48,656	0/0:29,0:29:87.29:0,87,1189	0/0:16,0:16:48.16:0,48,657	1/1:2,35:37:99:1180,105,0	0/0:23,0:23:69.23:0,69,943	0/0:19,0:19:54.17:0,54,726	0/0:15,0:15:45.14:0,45,601	0/0:18,0:18:45.15:0,45,616	0/0:25,0:25:69.22:0,69,927	0/0:19,0:19:57.18:0,57,760	0/0:28,0:28:84.28:0,84,1149	0/0:18,0:18:54.18:0,54,739	0/0:28,0:28:81.25:0,81,1089	0/0:14,0:14:42.14:0,42,574	0/0:23,0:23:66.19:0,66,883	0/0:18,0:18:51.16:0,51,682	0/0:30,0:30:87.26:0,87,1150	0/0:22,0:22:66.20:0,66,878	0/0:18,0:18:48.16:0,48,657	0/0:28,0:28:78.26:0,78,1067	0/0:14,0:14:42.13:0,42,558	1/1:0,32:32:96.21:1057,96,0	1/1:2,27:29:78.22:884,78,0	1/1:2,9:11:24.07:272,24,0
chr10	4508416	.	C	CAA	3016.96	PASS	AB=0.867;AC=11;AF=0.196;AN=56;BaseQRankSum=-1.193;DP=671;FS=0.411;HRun=13;HaplotypeScore=94.8799;InbreedingCoeff=0.8852;MQ=66.00;MQ0=3;MQRankSum=-2.055;QD=19.59;ReadPosRankSum=-2.138;VQSLOD=2.6117;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,29:44:79.19:926,79,0	0/1:11,0:13:1.65:2,0,155	0/0:13,0:7:4.46:0,4,50	0/0:15,0:9:8.63:0,9,61	0/0:13,0:15:26.62:0,27,223	0/0:16,0:16:34.70:0,35,315	0/0:24,0:26:40.37:0,40,527	1/1:10,3:25:48.04:483,48,0	0/0:26,0:26:71.89:0,72,629	0/0:20,0:20:38.80:0,39,341	0/0:25,0:25:53.57:0,54,457	0/0:23,0:23:50.78:0,51,441	0/0:22,0:22:41.81:0,42,361	0/0:26,0:28:30.36:0,30,330	0/0:34,0:35:83.53:0,84,725	0/0:24,0:26:41.57:0,42,355	0/0:26,0:26:59.83:0,60,528	0/0:25,0:27:74.37:0,74,616	0/0:33,0:32:63.09:0,63,550	0/0:23,0:24:44.56:0,45,429	0/0:26,0:29:61.97:0,62,502	0/0:18,0:19:35.59:0,36,298	0/0:16,0:18:14.61:0,15,104	0/0:23,0:23:65.93:0,66,581	0/0:28,0:28:59.58:0,60,513	1/1:7,15:24:47.11:571,47,0	1/1:9,19:30:56.66:708,57,0	1/1:1,13:16:40.43:502,40,0
chr10	4509280	.	GGC	G	646.79	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=8.286;DP=665;FS=4.972;HRun=0;HaplotypeScore=90.5860;InbreedingCoeff=0.9765;MQ=82.05;MQ0=0;MQRankSum=-7.786;QD=24.88;ReadPosRankSum=-1.632;VQSLOD=3.9308;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,108,2159	0/0:5,0:5:15.05:0,15,305	0/0:21,0:21:51.91:0,52,814	0/0:20,0:20:42.13:0,42,620	0/0:14,0:14:39.13:0,39,791	0/0:21,0:21:63.22:0,63,1280	0/0:32,0:32:96.33:0,96,1934	1/1:2,24:26:78:742,78,0	0/0:36,0:36:99:0,108,2162	0/0:24,0:24:72.24:0,72,1430	0/0:19,0:19:57.20:0,57,1157	0/0:30,0:30:90.31:0,90,1822	0/0:20,0:20:60.21:0,60,1218	0/0:18,0:18:54.19:0,54,1097	0/0:28,0:28:78.25:0,78,1526	0/0:24,0:24:72.23:0,72,1426	0/0:27,0:27:81.28:0,81,1646	0/0:23,0:23:69.19:0,69,1357	0/0:19,0:19:57.20:0,57,1133	0/0:15,0:15:45.14:0,45,846	0/0:53,0:53:99:0,156,3034	0/0:22,0:22:66.23:0,66,1324	0/0:11,0:11:33.11:0,33,653	0/0:48,0:47:99:0,138,2769	0/0:16,0:16:48.16:0,48,975	0/0:27,0:27:81.28:0,81,1646	0/0:23,0:23:69.24:0,69,1389	0/0:6,0:6:18.06:0,18,348
chr10	4509283	.	AGTGG	A	937.41	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=8.202;DP=668;FS=4.921;HRun=0;HaplotypeScore=117.3473;InbreedingCoeff=0.9836;MQ=83.62;MQ0=0;MQRankSum=-7.289;QD=39.06;ReadPosRankSum=-1.508;VQSLOD=3.3504;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,111,3067	0/0:6,0:6:18.06:0,18,516	0/0:24,0:24:68.78:0,69,1608	0/0:20,0:20:30.73:0,31,968	0/0:15,0:15:42.14:0,42,1199	0/0:21,0:21:63.22:0,63,1825	0/0:30,0:30:90.31:0,90,2523	1/1:0,24:24:72.24:1032,72,0	0/0:36,0:36:99:0,108,3023	0/0:23,0:23:69.23:0,69,1942	0/0:20,0:20:57.20:0,57,1646	0/0:31,0:31:93.32:0,93,2654	0/0:22,0:22:66.23:0,66,1865	0/0:18,0:18:54.19:0,54,1565	0/0:25,0:25:75.21:0,75,2057	0/0:24,0:24:72.25:0,72,2042	0/0:28,0:28:84.27:0,84,2332	0/0:23,0:23:66.23:0,66,1910	0/0:19,0:19:57.15:0,57,1580	0/0:13,0:13:39.12:0,39,1065	0/0:53,0:53:99:0,157,4429	0/0:22,0:22:66.22:0,66,1793	0/0:12,0:12:36.12:0,36,1039	0/0:48,0:47:99:0,138,3936	0/0:15,0:15:45.15:0,45,1304	0/0:30,0:30:90.31:0,90,2565	0/0:22,0:22:66.23:0,66,1836	0/0:6,0:6:18.06:0,18,521
chr10	4511314	.	AT	A	3480.11	PASS	AB=0.930;AC=21;AF=0.375;AN=56;BaseQRankSum=14.804;DP=583;FS=3.926;HRun=10;HaplotypeScore=64.6160;InbreedingCoeff=0.7825;MQ=73.06;MQ0=2;MQRankSum=-1.420;QD=13.23;ReadPosRankSum=1.509;VQSLOD=3.7345;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,21:21:62.99:547,63,0	0/0:11,0:11:27.07:0,27,299	0/0:13,0:11:0.39:0,0,175	0/1:17,0:14:9.71:10,0,152	0/0:20,0:21:57.02:0,57,611	0/0:20,0:20:54.12:0,54,580	0/1:9,1:10:1.99:2,0,206	1/1:7,28:35:81.82:696,82,0	0/0:24,0:24:44.98:0,45,606	0/0:32,1:33:64.18:0,64,929	0/0:30,0:30:87.19:0,87,937	0/0:11,0:11:27.05:0,27,287	0/1:13,2:15:7:7,0,370	0/0:14,1:15:19.07:0,19,438	1/1:2,16:18:44.99:391,45,0	0/0:21,0:21:63.14:0,63,680	1/1:5,27:32:41.80:592,42,0	1/1:1,18:19:44.98:391,45,0	0/0:20,0:20:57.11:0,57,605	0/0:25,0:25:63.17:0,63,695	0/0:12,0:12:27.07:0,27,299	0/0:22,0:23:60.12:0,60,650	0/0:29,0:29:60.16:0,60,658	0/0:12,0:12:36.10:0,36,398	1/1:1,19:20:50.99:442,51,0	1/1:7,0:26:40.74:119,41,0	1/1:2,1:27:43.74:146,44,0	1/1:0,0:23:46.85:138,47,0
chr10	4512301	.	G	GA	1161.07	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-8.928;DP=607;FS=1.358;HRun=6;HaplotypeScore=56.9043;InbreedingCoeff=0.9691;MQ=68.66;MQ0=0;MQRankSum=-0.636;QD=32.25;ReadPosRankSum=-4.506;VQSLOD=2.1025;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:69.16:0,69,704	0/0:4,0:4:12.03:0,12,122	0/0:24,0:16:45.06:0,45,438	0/0:23,0:18:44.20:0,44,458	0/0:28,0:28:75.16:0,75,760	0/0:26,0:26:72.16:0,72,735	0/0:14,0:14:39.07:0,39,390	1/1:2,34:36:99:1256,102,0	0/0:25,0:25:66.15:0,66,673	0/0:24,0:24:60.13:0,60,608	0/0:22,0:22:54.12:0,54,551	0/0:22,0:22:60.13:0,60,612	0/0:18,0:18:48.11:0,48,490	0/0:14,0:14:39.09:0,39,398	0/0:23,0:23:63.14:0,63,643	0/0:15,0:15:39.07:0,39,391	0/0:20,0:20:60.14:0,60,612	0/0:30,0:30:81.18:0,81,826	0/0:24,0:23:60.11:0,60,604	0/0:29,0:29:84.16:0,84,848	0/0:12,0:12:30.06:0,30,306	0/0:18,0:18:42.09:0,42,429	0/0:24,0:24:60.13:0,60,612	0/0:19,0:19:51.12:0,51,520	0/0:24,0:24:66.15:0,66,673	0/0:23,0:23:66.15:0,66,673	0/0:24,0:23:66.15:0,66,673	0/0:16,0:16:31.26:0,31,387
chr10	4513229	.	TTTTTATTTTA	T	2255.29	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=6.580;DP=421;FS=2.751;HRun=0;HaplotypeScore=120.8328;InbreedingCoeff=0.7460;MQ=69.13;MQ0=1;MQRankSum=-6.126;QD=30.48;ReadPosRankSum=4.112;VQSLOD=3.3228;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:21:15.05:0,15,438	0/0:5,0:5:6.02:0,6,300	0/0:22,0:13:10.22:0,10,236	0/0:28,0:11:14.41:0,14,234	0/0:18,0:18:33.11:0,33,1337	0/0:16,0:16:27.09:0,27,1319	0/0:7,0:7:6.02:0,6,277	0/0:44,0:44:75.26:0,75,2677	0/0:8,0:8:9.02:0,9,324	0/0:22,0:22:36.12:0,36,1733	0/0:14,0:14:18.05:0,18,591	0/0:10,0:10:12.04:0,12,581	0/0:9,0:9:12.04:0,12,598	0/0:9,0:9:12.03:0,12,402	0/0:6,0:6:9.03:0,9,309	0/0:5,0:5:6.02:0,6,300	1/1:11,9:20:15.05:449,15,0	0/0:28,0:28:48.16:0,48,1676	0/0:18,0:17:30.07:0,30,939	0/0:15,0:15:21.07:0,21,994	0/0:8,0:8:12.04:0,12,494	0/0:7,0:7:6.02:0,6,300	0/0:6,0:6:0.89:0,1,2	0/0:3,0:3:3.01:0,3,74	0/0:18,0:18:36.12:0,36,1324	1/1:9,8:17:24.08:700,24,0	1/1:14,11:25:26.96:809,27,0	1/1:7,5:12:15.05:450,15,0
chr10	4513574	.	GT	G	2558.08	PASS	AB=0.822;AC=15;AF=0.268;AN=56;BaseQRankSum=10.799;DP=564;FS=3.451;HRun=10;HaplotypeScore=76.5347;InbreedingCoeff=0.7576;MQ=70.93;MQ0=0;MQRankSum=-3.300;QD=12.85;ReadPosRankSum=-0.040;VQSLOD=3.6572;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:66.18:0,66,728	0/0:13,0:14:38.94:0,39,410	0/1:30,1:20:6.44:6,0,149	0/1:26,2:23:35.02:35,0,88	0/0:23,0:23:60.16:0,60,659	0/0:18,0:19:57.11:0,57,611	0/0:19,0:20:53.96:0,54,569	0/1:6,19:26:1.45:435,0,1	0/0:14,0:14:33.09:0,33,365	0/0:34,0:34:84.21:0,84,914	0/0:16,1:17:22.07:0,22,465	0/0:14,0:14:36.10:0,36,398	0/0:25,0:26:77.99:0,78,809	0/0:10,0:11:29.91:0,30,312	1/1:4,18:22:44.98:391,45,0	0/0:16,0:16:48.06:0,48,515	0/0:29,0:30:78.05:0,78,827	1/1:4,12:16:29.97:260,30,0	0/0:18,0:18:38.68:0,39,398	0/0:16,0:16:48.04:0,48,496	0/0:9,0:9:24:0,24,250	0/0:23,0:23:69.18:0,69,758	0/0:25,0:25:60.15:0,60,649	0/0:10,1:12:6.87:0,7,286	1/1:1,10:11:29.99:260,30,0	1/1:5,20:25:29.78:487,30,0	1/1:7,28:34:67.68:801,68,0	1/1:3,2:5:8.96:73,9,0
chr10	4513602	.	A	AT	2406.22	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=12.038;DP=567;FS=1.004;HRun=4;HaplotypeScore=80.7242;InbreedingCoeff=0.9881;MQ=75.30;MQ0=0;MQRankSum=-6.680;QD=34.87;ReadPosRankSum=-0.238;VQSLOD=3.8134;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:99:0,99,1121	0/0:12,0:12:36.10:0,36,408	0/0:14,0:13:29.90:0,30,323	0/0:21,0:21:15.85:0,16,319	0/0:24,0:24:63.18:0,63,713	0/0:25,0:25:72.21:0,72,817	0/0:21,0:21:57.16:0,57,645	0/0:34,0:34:90.22:0,90,986	0/0:15,0:15:45.13:0,45,510	0/0:30,0:30:84.23:0,84,945	0/0:20,0:20:51.14:0,51,578	0/0:13,0:13:33.08:0,33,364	0/0:27,0:27:75.21:0,75,850	0/0:11,0:11:33.09:0,33,374	0/0:22,0:22:57.16:0,57,647	0/0:18,0:18:54.14:0,54,604	0/0:27,0:27:72.20:0,72,802	0/0:12,0:12:27.08:0,27,306	0/0:22,0:22:60.15:0,60,661	0/0:15,0:15:39.11:0,39,442	0/0:10,0:10:27.08:0,27,306	0/0:27,0:27:75.20:0,75,840	0/0:19,0:19:57.16:0,57,646	0/0:13,0:13:36.09:0,36,399	0/0:11,0:11:30.09:0,30,340	1/1:1,22:23:35.19:868,35,0	1/1:1,38:37:99:1474,108,0	1/1:0,7:7:15.05:205,15,0
chr10	4515092	.	A	AC	90.48	PASS	AB=1.000;AC=3;AF=0.060;AN=50;BaseQRankSum=-0.500;DP=449;FS=6.208;HRun=5;HaplotypeScore=64.8190;InbreedingCoeff=0.8233;MQ=75.24;MQ0=0;MQRankSum=-3.005;QD=9.05;ReadPosRankSum=-2.762;VQSLOD=-0.1509;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	./.	0/0:11,0:11:26.93:0,27,269	0/0:30,0:28:63.79:0,64,634	0/0:16,0:13:26.88:0,27,241	0/0:14,0:14:36:0,36,367	0/0:18,0:18:51.12:0,51,541	0/0:27,0:27:75.19:0,75,801	1/1:3,6:9:15.92:179,16,0	0/0:17,0:17:51.11:0,51,533	0/0:16,0:16:39.10:0,39,419	0/0:13,0:13:33.03:0,33,338	0/0:23,0:23:66.16:0,66,700	0/0:10,0:10:24.06:0,24,257	0/0:23,0:23:60.05:0,60,613	./.	0/0:23,0:23:55.46:0,55,604	0/0:27,0:27:66.16:0,66,708	0/1:1,0:1:0:0,0,0	0/0:12,0:12:36.08:0,36,377	0/0:4,0:4:9.02:0,9,95	0/0:40,0:40:90.22:0,90,965	0/0:18,0:18:22.05:0,22,453	0/0:15,0:15:39.07:0,39,404	0/0:30,0:30:84.21:0,84,900	./.	0/0:26,0:26:72.14:0,72,759	0/0:19,0:19:54.13:0,54,574	0/0:5,0:5:15.04:0,15,161
chr10	4515488	.	ACGGT	A	3520.08	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=12.322;DP=485;FS=2.088;HRun=0;HaplotypeScore=113.2366;InbreedingCoeff=0.9486;MQ=82.35;MQ0=0;MQRankSum=-10.060;QD=23.47;ReadPosRankSum=3.617;VQSLOD=3.4302;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:40,0:40:31.45:281,31,0	0/0:9,0:9:27.09:0,27,689	0/0:15,0:15:36.11:0,36,888	0/0:17,0:17:45.15:0,45,1045	0/0:10,0:10:21.07:0,21,548	0/0:17,0:17:45.15:0,45,1144	0/0:33,0:33:90.29:0,90,2247	1/1:21,0:21:29.96:269,30,0	0/0:15,0:15:42.13:0,42,983	0/0:19,0:19:44.69:0,45,1067	0/0:4,0:4:9.03:0,9,236	0/0:23,0:23:57.20:0,57,1410	0/0:9,0:9:21.06:0,21,496	0/0:18,0:18:42.14:0,42,1058	1/1:12,0:12:29.96:269,30,0	0/0:16,0:16:42.14:0,42,1077	1/1:4,32:36:84.29:1524,84,0	1/1:12,0:11:12.01:112,12,0	0/0:15,0:15:42.14:0,42,997	0/0:6,0:6:18.06:0,18,471	0/0:55,0:55:99:0,157,3909	0/0:8,0:8:15.05:0,15,359	0/0:16,0:16:33.10:0,33,680	0/0:30,0:30:75.26:0,75,1941	1/1:4,0:4:3.47:29,3,0	1/1:2,4:6:12.04:218,12,0	1/1:3,10:13:27.09:491,27,0	1/1:0,6:6:18.06:327,18,0
chr10	4515489	.	CGGTCGGTCGAGCCAGT	C	5979.31	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=7.762;DP=457;FS=1.903;HRun=0;HaplotypeScore=208.5035;InbreedingCoeff=0.9650;MQ=83.36;MQ0=0;MQRankSum=-9.176;QD=90.60;ReadPosRankSum=-0.987;VQSLOD=4.6865;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,29:29:48.16:1998,48,0	0/0:9,0:9:27.09:0,27,1976	0/0:13,0:13:39.13:0,39,2324	0/0:17,0:17:51.18:0,51,2804	0/0:10,0:10:30.09:0,30,1704	0/0:17,0:17:48.15:0,48,3372	0/0:33,0:33:96.33:0,96,6956	1/1:0,14:14:42.13:1624,42,0	0/0:15,0:15:45.14:0,45,2929	0/0:20,0:20:56.98:0,57,3216	0/0:4,0:4:12.04:0,12,736	0/0:23,0:23:69.24:0,69,4439	0/0:9,0:9:27.09:0,27,1568	0/0:18,0:18:48.60:0,49,3235	1/1:0,11:11:30.10:1456,30,0	0/0:16,0:16:48.16:0,48,3258	0/0:36,0:36:90.27:0,90,3796	1/1:0,9:8:12.04:587,12,0	0/0:15,0:15:45.15:0,45,2444	0/0:6,0:6:18.06:0,18,1437	0/0:54,0:54:99:0,163,11455	0/0:9,0:9:24.07:0,24,1226	0/0:15,0:15:38.28:0,38,1914	0/0:28,0:28:84.29:0,84,5934	1/1:0,3:3:9.03:314,9,0	0/0:6,0:6:18.06:0,18,675	0/0:12,0:12:30.10:0,30,1277	0/0:6,0:6:18.06:0,18,817
chr10	4515711	.	TTTGTTG	T	2467.58	PASS	AB=1.000;AC=12;AF=0.214;AN=56;BaseQRankSum=7.169;DP=626;FS=5.019;HRun=0;HaplotypeScore=149.5997;InbreedingCoeff=0.7509;MQ=56.89;MQ0=3;MQRankSum=-5.287;QD=15.82;ReadPosRankSum=-1.685;VQSLOD=2.4536;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:23,6:27:33.05:551,33,0	0/0:9,0:9:24.08:0,24,751	0/0:22,0:17:32.10:0,32,633	0/0:19,0:16:12.04:0,12,289	0/0:23,0:23:54.19:0,54,1660	0/0:19,0:19:51.16:0,51,1539	0/0:25,0:25:51.18:0,51,1493	1/1:11,16:27:45.09:585,45,0	0/0:20,0:20:48.16:0,48,1448	0/0:30,0:30:78.27:0,78,2329	0/0:28,0:28:68.56:0,69,2023	0/0:20,0:20:45.14:0,45,1366	0/0:7,0:7:15.05:0,15,493	0/0:20,0:20:48.16:0,48,1522	1/1:6,10:16:18.06:382,18,0	0/0:20,0:20:48.13:0,48,1402	0/0:34,0:32:70.10:0,70,1035	1/1:7,10:17:6.02:127,6,0	0/0:31,0:30:63.14:0,63,1783	0/0:28,0:28:66.23:0,66,2095	0/0:28,0:28:66.19:0,66,2003	0/0:13,0:13:33.10:0,33,920	0/0:30,0:30:72.25:0,72,2017	0/0:25,0:25:60.19:0,60,1754	1/1:4,21:25:45.15:955,45,0	0/1:28,0:26:23.44:23,0,450	0/0:19,0:19:13.95:0,14,315	0/1:14,0:13:20.21:20,0,183
chr10	4515714	.	G	GT	2623.08	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=12.611;DP=618;FS=18.213;HRun=3;HaplotypeScore=87.6623;InbreedingCoeff=0.9548;MQ=56.75;MQ0=3;MQRankSum=-6.525;QD=27.32;ReadPosRankSum=-0.657;VQSLOD=1.8867;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:25:50.33:0,50,503	0/0:9,0:9:27.08:0,27,334	0/0:22,0:16:31.49:0,31,439	0/0:19,0:15:38.92:0,39,432	0/0:23,0:23:69.22:0,69,855	0/0:19,0:19:54.15:0,54,656	0/0:25,0:25:72.23:0,72,888	0/0:24,0:24:3.85:0,4,317	0/0:21,0:21:60.17:0,60,728	0/0:32,0:32:90.28:0,90,1103	0/0:28,0:28:78.02:0,78,966	0/0:20,0:20:57.16:0,57,691	0/0:7,0:7:18.06:0,18,223	0/0:20,0:20:57.18:0,57,705	0/0:15,0:15:31.51:0,32,259	0/0:20,0:20:57.18:0,57,705	1/1:7,27:32:69.39:904,69,0	0/0:17,0:17:20.54:0,21,209	0/0:28,0:27:77.27:0,77,935	0/0:30,0:30:90.27:0,90,1100	0/0:26,0:26:72.21:0,72,880	0/0:12,0:12:36.11:0,36,443	0/0:30,0:30:87.26:0,87,1064	0/0:23,0:23:63.20:0,63,780	0/0:24,0:24:50.20:0,50,297	1/1:7,21:26:39.07:779,39,0	1/1:8,12:20:54.08:669,54,0	1/1:5,9:13:35.95:431,36,0
chr10	4515715	.	TTG	T	2184.29	PASS	AB=0.974;AC=13;AF=0.232;AN=56;BaseQRankSum=16.293;DP=615;FS=6.015;HRun=0;HaplotypeScore=99.7041;InbreedingCoeff=0.5121;MQ=55.86;MQ0=3;MQRankSum=-8.887;QD=10.87;ReadPosRankSum=1.357;VQSLOD=3.0463;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:23,4:25:99:102,0,313	0/0:9,0:9:27.09:0,27,493	0/0:22,0:15:34.27:0,34,606	0/0:19,0:15:37.45:0,37,511	0/0:23,0:23:69.23:0,69,1221	0/0:19,0:19:54.17:0,54,1007	0/0:25,0:25:72.24:0,72,1235	0/1:24,0:24:99:366,0,218	0/0:21,0:21:63.21:0,63,1130	0/0:32,0:32:96.33:0,96,1765	0/0:29,0:29:79.79:0,80,1434	0/0:20,0:20:57.17:0,57,982	0/0:7,0:7:18.06:0,18,327	0/0:21,0:21:60.20:0,60,1072	0/1:15,0:15:46.58:47,0,153	0/0:19,0:19:57.19:0,57,995	1/1:29,4:31:56.25:289,56,0	0/1:17,0:17:5.49:5,0,163	0/0:28,0:27:78.19:0,78,1340	0/0:30,0:30:90.30:0,90,1607	0/0:25,0:25:72.23:0,72,1295	0/0:12,0:12:36.12:0,36,657	0/0:30,0:30:90.29:0,90,1590	0/0:23,0:23:66.22:0,66,1207	0/1:24,0:24:59.68:147,0,60	1/1:26,0:26:18.12:604,18,0	1/1:19,0:19:53.78:481,54,0	1/1:14,0:13:35.91:321,36,0
chr10	4515717	.	G	GT	2003.66	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=11.620;DP=612;FS=24.475;HRun=2;HaplotypeScore=90.4079;InbreedingCoeff=0.7877;MQ=56.43;MQ0=3;MQRankSum=-3.922;QD=17.42;ReadPosRankSum=0.048;VQSLOD=2.3382;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:27:47.23:0,47,428	0/0:9,0:9:24.08:0,24,297	0/0:24,0:16:34.52:0,35,476	0/0:20,0:15:34.65:0,35,393	0/0:24,0:24:72.20:0,72,866	0/0:18,0:18:51.16:0,51,632	0/0:24,0:24:72.23:0,72,892	0/1:22,0:22:99:125,0,272	0/0:22,0:22:66.19:0,66,804	0/0:32,0:32:96.30:0,96,1189	0/0:29,0:29:78.02:0,78,966	0/0:18,0:18:54.17:0,54,669	0/0:6,0:6:18.06:0,18,223	0/0:21,0:21:57.18:0,57,706	0/0:16,0:16:30.02:0,30,237	0/0:19,0:19:51.16:0,51,632	1/1:11,23:32:10.39:836,10,0	0/0:17,0:17:22.02:0,22,185	0/0:27,0:26:75.24:0,75,928	0/0:30,0:30:84.26:0,84,1037	0/0:24,0:24:69.22:0,69,855	0/0:13,0:13:36.11:0,36,446	0/0:29,0:29:87.27:0,87,1078	0/0:22,0:22:63.20:0,63,778	0/0:24,0:24:43.45:0,43,210	1/1:13,14:25:1.49:409,1,0	1/1:7,11:18:43.17:485,43,0	1/1:7,7:13:21.17:300,21,0
chr10	4515718	.	TTG	T	1241.67	PASS	AB=0.974;AC=10;AF=0.179;AN=56;BaseQRankSum=13.577;DP=608;FS=8.904;HRun=0;HaplotypeScore=102.6151;InbreedingCoeff=0.5168;MQ=56.42;MQ0=3;MQRankSum=-10.555;QD=7.66;ReadPosRankSum=1.353;VQSLOD=2.7417;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:28:3.93:4,0,279	0/0:8,0:8:24.08:0,24,463	0/0:24,0:17:40.31:0,40,685	0/0:20,0:15:35.88:0,36,506	0/0:24,0:24:72.23:0,72,1246	0/0:18,0:18:54.18:0,54,1019	0/0:24,0:24:72.24:0,72,1243	0/0:23,0:23:27.12:0,27,332	0/0:22,0:22:66.22:0,66,1168	0/0:32,0:32:96.33:0,96,1769	0/0:29,0:29:76.77:0,77,1399	0/0:19,0:19:54.18:0,54,959	0/0:6,0:6:18.06:0,18,327	0/0:20,0:20:57.19:0,57,1036	0/1:16,0:16:18.39:18,0,186	0/0:18,0:18:51.17:0,51,922	0/1:30,4:32:13.32:13,0,516	0/0:17,0:17:5.95:0,6,200	0/0:26,0:25:75.25:0,75,1319	0/0:28,0:28:84.28:0,84,1532	0/0:24,0:24:72.24:0,72,1307	0/0:13,0:13:39.13:0,39,705	0/0:29,0:29:87.29:0,87,1567	0/0:21,0:21:63.21:0,63,1173	0/1:24,0:24:29.99:85,0,30	1/1:20,7:25:13.62:558,14,0	1/1:16,1:17:50.74:418,51,0	1/1:12,2:13:35.90:303,36,0
chr10	4515720	.	G	GT	1705.34	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=9.451;DP=611;FS=21.017;HRun=2;HaplotypeScore=92.1702;InbreedingCoeff=0.8334;MQ=56.35;MQ0=3;MQRankSum=-5.748;QD=18.34;ReadPosRankSum=-1.268;VQSLOD=2.2312;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:30:57.81:0,58,511	0/0:8,0:8:24.08:0,24,297	0/0:25,0:18:41.85:0,42,519	0/0:19,0:14:32.96:0,33,388	0/0:23,0:23:69.22:0,69,855	0/0:19,0:19:54.17:0,54,668	0/0:24,0:24:72.20:0,72,866	0/0:22,0:22:50.84:0,51,491	0/0:22,0:22:63.20:0,63,780	0/0:33,0:33:96.30:0,96,1190	0/0:28,0:28:76.26:0,76,963	0/0:19,0:19:54.17:0,54,664	0/0:6,0:6:18.06:0,18,223	0/0:20,0:20:57.18:0,57,705	0/0:16,0:16:31.10:0,31,236	0/0:18,0:18:51.16:0,51,631	0/1:34,0:32:30.97:31,0,249	0/0:17,0:17:26.09:0,26,249	0/0:26,0:25:75.23:0,75,917	0/0:30,0:30:81.25:0,81,1004	0/0:24,0:24:72.23:0,72,892	0/0:13,0:13:39.12:0,39,483	0/0:29,0:29:87.26:0,87,1065	0/0:21,0:21:63.20:0,63,781	0/0:24,0:24:43.18:0,43,197	1/1:14,14:26:37.87:782,38,0	1/1:6,11:17:51.07:621,51,0	1/1:7,7:13:35.95:420,36,0
chr10	4515825	.	CA	C	2626.20	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=12.446;DP=592;FS=1.586;HRun=2;HaplotypeScore=65.4315;InbreedingCoeff=0.9570;MQ=52.53;MQ0=18;MQRankSum=-7.641;QD=27.36;ReadPosRankSum=-5.105;VQSLOD=1.8102;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,15:11:27.09:350,27,0	0/0:14,0:14:42.14:0,42,628	0/0:28,0:2:6:0,6,55	0/0:14,0:6:11.59:0,12,176	0/0:29,0:29:87.29:0,87,1304	0/0:24,0:22:66.18:0,66,964	0/0:16,2:17:12.36:0,12,673	1/1:3,21:21:57.19:739,57,0	0/0:16,0:16:48.16:0,48,719	0/0:38,0:38:99:0,105,1559	0/0:21,0:21:63.21:0,63,944	0/0:18,0:18:54.18:0,54,809	0/0:11,0:11:33.11:0,33,495	0/0:25,0:25:72.07:0,72,1071	1/1:0,16:15:36.12:467,36,0	0/0:16,0:16:48.13:0,48,695	0/0:28,0:26:69.23:0,69,1034	1/1:0,18:16:33.11:428,33,0	0/0:17,3:19:13.98:0,14,661	0/0:22,0:22:66.22:0,66,973	0/0:20,0:19:57.19:0,57,852	0/0:24,0:24:60.20:0,60,897	0/0:18,0:17:48.16:0,48,713	0/0:25,0:25:69.23:0,69,1034	1/1:3,20:21:63.20:817,63,0	0/0:25,1:24:69.23:0,69,1034	0/0:30,0:29:87.29:0,87,1301	0/0:11,0:11:33.11:0,33,495
chr10	4515869	.	GC	G	2043.02	PASS	AC=10;AF=0.192;AN=52;BaseQRankSum=8.753;DP=605;FS=7.610;HRun=2;HaplotypeScore=80.1342;InbreedingCoeff=0.9972;MQ=42.74;MQ0=64;MQRankSum=-8.709;QD=19.84;ReadPosRankSum=-0.720;VQSLOD=2.9087;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,16:14:27.09:350,27,0	0/0:15,0:15:42.14:0,42,626	./.	./.	0/0:22,0:19:54.18:0,54,802	0/0:24,0:22:57.15:0,57,791	0/0:22,0:20:54.18:0,54,804	1/1:6,20:21:60.19:778,60,0	0/0:19,0:18:51.17:0,51,761	0/0:24,0:22:63.17:0,63,918	0/0:14,0:11:30.10:0,30,445	0/0:24,0:22:57.17:0,57,814	0/0:12,0:9:27.09:0,27,402	0/0:26,0:23:57.01:0,57,832	1/1:8,14:15:27.09:350,27,0	0/0:26,0:24:66.22:0,66,985	0/0:35,0:30:66.22:0,66,984	1/1:4,10:9:18.06:231,18,0	0/0:17,0:15:36.12:0,36,539	0/0:17,0:17:45.15:0,45,671	0/0:33,0:31:60.20:0,60,895	0/0:23,0:22:54.17:0,54,786	0/0:19,0:15:39.12:0,39,565	0/0:47,0:41:84.24:0,84,1227	1/1:0,17:15:39.13:505,39,0	0/0:27,0:21:60.20:0,60,897	0/0:24,0:19:51.16:0,51,743	0/0:28,0:23:51.17:0,51,749
chr10	4516756	.	CA	C	600.16	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.658;DP=637;FS=3.926;HRun=7;HaplotypeScore=64.0941;InbreedingCoeff=0.9978;MQ=69.14;MQ0=0;MQRankSum=0.867;QD=22.23;ReadPosRankSum=-3.846;VQSLOD=2.0216;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:72.06:0,72,852	0/0:15,0:15:42.13:0,42,525	0/0:13,0:10:29.98:0,30,344	0/0:18,0:16:30.93:0,31,443	0/0:32,0:32:93.28:0,93,1156	0/0:18,0:18:51.16:0,51,642	0/0:18,0:18:45.13:0,45,554	1/1:4,23:27:69.13:695,69,0	0/0:24,0:24:69.19:0,69,832	0/0:33,0:33:93.28:0,93,1147	0/0:21,0:21:60.19:0,60,754	0/0:23,0:23:63.20:0,63,793	0/0:23,0:23:66.21:0,66,830	0/0:36,0:36:99:0,102,1258	0/0:16,0:16:48.08:0,48,550	0/0:20,0:20:51.15:0,51,630	0/0:17,0:17:42.12:0,42,516	0/0:30,0:30:87.26:0,87,1080	0/0:14,0:14:36.08:0,36,424	0/0:28,0:28:81.25:0,81,1008	0/0:19,0:19:57.18:0,57,717	0/0:36,0:36:96.30:0,96,1199	0/0:22,0:22:57.17:0,57,699	0/0:16,0:16:45.14:0,45,565	0/0:24,0:24:72.12:0,72,868	0/0:40,0:40:99:0,108,1346	0/0:21,0:21:60.18:0,60,741	0/0:9,0:9:27.09:0,27,338
chr10	4517552	.	CTCTCTGTCTCTGT	C	970.68	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.919;DP=587;FS=15.518;HRun=0;HaplotypeScore=213.5236;InbreedingCoeff=0.9936;MQ=80.98;MQ0=1;MQRankSum=-1.173;QD=38.83;ReadPosRankSum=-3.060;VQSLOD=1.0998;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:75.26:0,75,4126	0/0:13,0:13:33.11:0,33,1565	0/0:36,0:30:42.13:0,42,1991	0/0:57,0:46:56.33:0,56,3250	0/0:17,0:17:45.11:0,45,2370	0/0:10,0:10:30.10:0,30,1628	0/0:35,0:34:78.24:0,78,4237	1/1:11,14:25:42.12:1066,42,0	0/0:21,0:21:53.92:0,54,2991	0/0:26,0:26:75.26:0,75,4497	0/0:10,0:10:24.07:0,24,1288	0/0:24,0:24:69.24:0,69,3704	0/0:15,0:15:36.12:0,36,1853	0/0:13,0:13:36.12:0,36,2125	0/0:24,0:24:54.19:0,54,2999	0/0:12,0:12:33.11:0,33,1713	0/0:19,0:19:48.15:0,48,2667	0/0:15,0:13:30.10:0,30,1634	0/0:17,0:17:30.10:0,30,1543	0/0:15,0:15:42.14:0,42,2145	0/0:30,0:30:78.27:0,78,4514	0/0:12,0:12:27.09:0,27,1551	0/0:14,0:14:30.10:0,30,1682	0/0:30,0:30:72.25:0,72,4001	0/0:13,0:13:30.10:0,30,1419	0/0:19,0:19:51.16:0,51,2228	0/0:18,0:18:51.17:0,51,2434	0/0:16,0:16:42.14:0,42,2124
chr10	4517591	.	CCTCTCTCTCTCT	C	828.21	PASS	AB=0.976;AC=13;AF=0.295;AN=44;BaseQRankSum=0.863;DP=621;FS=13.703;HRun=0;HaplotypeScore=177.5956;InbreedingCoeff=0.2993;MQ=65.66;MQ0=39;MQRankSum=-0.538;QD=6.18;ReadPosRankSum=0.152;VQSLOD=1.6120;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:26:12.04:257,12,0	0/0:10,0:10:2.97:0,3,20	./.	./.	./.	0/0:15,0:14:3.01:0,3,66	0/0:33,0:30:6.91:0,7,244	0/0:26,0:25:9.03:0,9,137	0/0:20,0:19:3.14:0,3,40	0/0:26,0:26:0:0,0,0	./.	0/1:18,0:18:28.43:28,0,68	0/0:11,0:11:2.94:0,3,18	0/0:11,0:11:6.48:0,6,60	./.	0/0:14,0:14:17.68:0,18,224	0/1:18,0:16:10.80:11,0,64	1/1:15,1:13:9.03:278,9,0	0/0:19,0:17:3.48:0,3,82	1/1:17,0:17:0.89:2,1,0	0/0:28,0:25:6.02:0,6,222	./.	0/0:12,0:11:1.25:0,1,3	0/0:30,0:26:18.01:0,18,479	0/0:12,3:15:0:0,0,0	0/1:12,1:12:94.31:94,0,97	1/1:9,2:11:8.57:193,9,0	1/1:12,0:10:3.01:94,3,0
chr10	4517650	.	CTGTGTG	C	934.32	PASS	AB=1.000;AC=14;AF=0.269;AN=52;BaseQRankSum=0.568;DP=478;FS=11.484;HRun=0;HaplotypeScore=94.0108;InbreedingCoeff=0.4284;MQ=36.33;MQ0=69;MQRankSum=2.949;QD=6.15;ReadPosRankSum=2.614;VQSLOD=0.5214;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:39:17.40:0,17,660	0/1:10,0:10:46.63:47,0,64	./.	./.	0/0:15,0:14:12.04:0,12,265	0/0:14,0:12:11.52:0,12,164	0/0:41,0:36:17.70:0,18,257	0/0:14,0:13:7.27:0,7,100	0/0:15,0:12:23.96:0,24,400	0/0:14,0:11:12.04:0,12,248	0/0:11,0:10:12.03:0,12,200	0/0:17,0:15:18.05:0,18,282	0/1:13,0:11:2.59:3,0,108	0/0:13,0:10:14.55:0,15,238	1/1:21,2:21:26.52:538,27,0	0/0:20,0:18:9.03:0,9,206	0/0:18,0:16:22.36:0,22,353	1/1:18,0:12:1.24:16,1,0	0/1:14,0:14:8.59:9,0,88	0/0:17,0:16:15.05:0,15,339	0/0:32,0:21:14.62:0,15,280	0/0:14,0:12:9:0,9,157	0/0:16,0:9:3.01:0,3,65	0/1:27,0:18:20.68:21,0,198	1/1:18,0:16:5.70:109,6,0	1/1:10,5:14:14.56:298,15,0	1/1:13,0:11:2.50:47,3,0	0/0:10,0:5:0:0,0,0
chr10	4518163	.	AT	A	4120.17	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=11.384;DP=732;FS=6.875;HRun=2;HaplotypeScore=97.0162;InbreedingCoeff=0.9997;MQ=77.30;MQ0=1;MQRankSum=-2.604;QD=32.96;ReadPosRankSum=2.701;VQSLOD=3.3952;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,52:53:99:1866,144,0	0/0:16,0:16:48.15:0,48,696	0/0:19,0:19:53.58:0,54,703	0/0:21,0:19:50.51:0,51,675	0/0:14,0:14:42.14:0,42,629	0/0:23,0:23:69.23:0,69,1032	0/0:27,0:27:75.22:0,75,1068	0/0:34,0:34:99:0,99,1444	0/0:31,0:31:93.32:0,93,1393	0/0:25,0:25:69.23:0,69,1034	0/0:18,0:18:54.17:0,54,790	0/0:28,0:28:81.27:0,81,1196	0/0:25,0:25:72.23:0,72,1052	0/0:23,0:23:69.22:0,69,1014	1/1:0,22:22:48.16:623,48,0	0/0:21,0:21:60.20:0,60,882	0/0:44,0:44:99:0,129,1864	1/1:0,31:31:78.25:1012,78,0	0/0:18,0:17:54.15:0,54,744	0/0:19,0:19:57.17:0,57,815	0/0:35,0:35:99:0,102,1526	0/0:22,0:22:63.19:0,63,903	0/0:19,0:19:51.17:0,51,764	0/0:47,0:47:99:0,138,2037	1/1:0,19:19:48.16:618,48,0	0/0:38,0:38:99:0,111,1622	0/0:31,0:31:93.26:0,93,1290	0/0:9,0:9:27.09:0,27,403
chr10	4534904	.	T	TAAC	4847.14	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-9.427;DP=725;FS=15.554;HRun=0;HaplotypeScore=104.2740;InbreedingCoeff=0.9855;MQ=54.09;MQ0=1;MQRankSum=3.469;QD=39.73;ReadPosRankSum=2.351;VQSLOD=4.9525;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,30:38:69.16:1393,69,0	0/0:12,0:12:33.07:0,33,447	0/0:22,0:19:15.04:0,15,196	0/0:19,0:17:21.07:0,21,295	0/0:19,0:19:33:0,33,409	0/0:21,0:21:45.15:0,45,613	0/0:26,0:26:57.13:0,57,768	0/0:24,0:24:42.14:0,42,586	0/0:23,0:23:57.16:0,57,790	0/0:46,0:46:99:0,102,1318	0/0:24,0:24:48.16:0,48,669	0/0:32,0:32:63.19:0,63,864	0/0:20,0:20:27.07:0,27,366	0/0:24,0:24:57.18:0,57,781	1/1:6,18:24:51.18:1030,51,0	0/0:28,0:28:63.10:0,63,819	0/0:22,0:22:45.11:0,45,613	1/1:7,15:22:36.12:727,36,0	0/0:10,0:10:12.04:0,12,171	0/0:25,0:25:54.12:0,54,728	0/0:42,0:42:96.12:0,96,1209	0/0:25,0:25:51.12:0,51,671	0/0:24,0:24:63.16:0,63,873	0/0:34,0:34:63.16:0,63,831	1/1:6,31:38:84.29:1696,84,0	0/0:37,0:38:78.18:0,78,1066	0/0:25,0:25:60.18:0,60,836	0/0:18,0:18:51.14:0,51,676
chr10	4535939	.	C	CA	2059.21	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-3.711;DP=618;FS=8.263;HRun=2;HaplotypeScore=58.5181;InbreedingCoeff=0.9824;MQ=66.62;MQ0=0;MQRankSum=-2.263;QD=34.32;ReadPosRankSum=2.218;VQSLOD=3.6327;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:78.24:0,78,964	0/0:8,0:8:24.06:0,24,284	0/0:12,0:12:13.25:0,13,353	0/0:13,0:13:39.02:0,39,463	0/0:31,0:31:90.28:0,90,1113	0/0:28,0:28:81.25:0,81,1002	0/0:28,0:28:78.21:0,78,940	0/0:47,0:47:99:0,141,1694	0/0:22,0:22:60.17:0,60,729	0/0:22,0:22:63.19:0,63,771	0/0:32,0:32:96.29:0,96,1177	0/0:32,0:32:93.28:0,93,1139	0/0:25,0:25:75.22:0,75,912	0/0:17,0:17:48.14:0,48,583	0/0:17,0:17:51.16:0,51,631	0/0:27,0:27:81.24:0,81,991	0/0:23,0:23:66.21:0,66,817	0/0:23,0:23:66.19:0,66,802	0/0:14,0:14:42.13:0,42,519	0/0:19,0:19:54.17:0,54,668	0/0:40,0:40:99:0,111,1362	0/0:6,0:6:18.06:0,18,222	0/0:15,0:15:45.14:0,45,557	0/0:25,0:25:72.23:0,72,891	0/0:5,0:5:15.05:0,15,186	1/1:4,18:22:57.15:777,57,0	1/1:3,23:26:63.21:907,63,0	1/1:0,12:12:36.12:518,36,0
chr10	4536204	.	TA	T	2370.98	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=10.829;DP=409;FS=2.357;HRun=1;HaplotypeScore=44.8285;InbreedingCoeff=0.8101;MQ=70.93;MQ0=1;MQRankSum=-1.922;QD=28.57;ReadPosRankSum=1.178;VQSLOD=3.4424;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:48.05:0,48,647	0/0:8,0:8:24.08:0,24,366	0/0:7,0:5:8.97:0,9,82	0/1:16,0:10:11.49:11,0,91	0/0:13,0:13:39.11:0,39,555	0/0:27,0:27:81.27:0,81,1196	0/0:10,0:10:25.30:0,25,370	0/0:25,0:25:75.19:0,75,1015	0/0:14,0:14:42.13:0,42,606	0/0:24,0:24:69.23:0,69,1028	0/0:21,0:21:63.14:0,63,855	0/0:10,0:10:30.09:0,30,433	0/0:9,0:9:27.09:0,27,396	0/0:8,0:8:24.08:0,24,364	0/0:12,0:12:36.08:0,36,494	0/0:8,0:8:24.08:0,24,352	0/0:27,0:27:81.16:0,81,1123	0/0:13,0:13:39.13:0,39,590	0/0:20,0:20:60.17:0,60,876	0/0:16,0:16:48.14:0,48,680	0/0:5,0:5:15.05:0,15,226	0/0:5,0:5:15.03:0,15,207	0/0:11,0:11:33.10:0,33,465	0/0:4,0:4:11.83:0,12,150	0/0:13,0:11:33.10:0,33,483	1/1:0,29:27:81.15:1042,81,0	1/1:0,27:27:78.26:1088,78,0	1/1:0,11:11:27.09:377,27,0
chr10	4536296	.	A	AACCTTATAAAGTGAAC	5457.04	PASS	AB=0.750;AC=5;AF=0.089;AN=56;BaseQRankSum=5.249;DP=614;FS=2.506;HRun=0;HaplotypeScore=254.0891;InbreedingCoeff=0.7643;MQ=74.12;MQ0=1;MQRankSum=-7.987;QD=139.92;ReadPosRankSum=-2.025;VQSLOD=4.5003;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:34:99:0,102,4572	0/0:12,0:12:36.11:0,36,1598	0/0:21,0:21:60.17:0,60,2155	0/0:12,0:11:30.10:0,30,1028	0/0:28,0:28:81.28:0,81,3711	0/0:26,0:26:78.27:0,78,3438	0/0:15,0:15:45.15:0,45,2020	0/0:30,0:30:87.28:0,87,3471	0/0:25,0:25:72.25:0,72,3171	0/0:31,0:31:93.30:0,93,3779	0/0:24,0:24:72.23:0,72,3004	0/0:21,0:21:63.22:0,63,2857	0/0:27,0:27:81.26:0,81,3632	0/0:20,0:20:57.20:0,57,2688	0/0:26,0:26:78.25:0,78,3311	0/0:23,0:23:69.24:0,69,3112	0/0:37,0:37:99:0,111,4574	0/0:21,0:21:54.19:0,54,2555	0/0:21,0:21:54.17:0,54,2176	0/0:22,0:22:66.20:0,66,2906	0/0:34,0:34:96.33:0,96,4272	0/0:18,0:18:54.17:0,54,2283	0/0:22,0:22:63.19:0,63,2762	0/0:12,0:12:33.11:0,33,1486	0/0:12,0:9:27.09:0,27,1285	0/1:10,5:13:99:1944,0,105	1/1:15,4:18:54.18:3322,54,0	1/1:4,0:4:12.04:191,12,0
chr10	4536346	.	C	CG	536.27	PASS	AB=0.560;AC=5;AF=0.089;AN=56;BaseQRankSum=4.321;DP=621;FS=25.138;HRun=1;HaplotypeScore=63.3013;InbreedingCoeff=0.7295;MQ=70.71;MQ0=4;MQRankSum=-3.587;QD=19.86;ReadPosRankSum=-1.065;VQSLOD=2.2083;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:45:99:0,129,1673	0/0:9,0:9:27.07:0,27,336	0/0:18,0:12:21.51:0,22,245	0/0:15,0:13:19.67:0,20,207	0/0:18,0:18:54.17:0,54,695	0/0:23,0:23:66.20:0,66,842	0/0:30,0:30:90.26:0,90,1138	0/0:36,0:36:99:0,102,1258	0/0:23,0:23:66.18:0,66,837	0/0:25,0:25:75.24:0,75,971	0/0:15,0:15:42.14:0,42,545	0/0:28,0:28:81.22:0,81,1032	0/0:20,0:20:60.17:0,60,759	0/0:23,0:23:69.17:0,69,862	0/0:27,0:26:78.19:0,78,976	0/0:17,0:17:51.15:0,51,647	0/0:32,0:32:87.26:0,87,1109	0/0:19,0:19:57.16:0,57,711	0/0:28,0:28:81.26:0,81,1049	0/0:23,0:23:69.22:0,69,895	0/0:46,0:46:99:0,132,1672	0/0:25,0:25:75.23:0,75,958	0/0:13,0:13:33.06:0,33,409	0/0:22,0:22:66.20:0,66,840	0/0:12,0:12:36.12:0,36,467	0/1:3,11:9:14.89:272,0,15	1/1:3,8:9:21.06:295,21,0	1/1:0,2:2:6.02:90,6,0
chr10	4536610	.	CCT	C	742.42	PASS	AB=0.600;AC=15;AF=0.268;AN=56;BaseQRankSum=5.938;DP=613;FS=14.832;HRun=0;HaplotypeScore=62.3195;InbreedingCoeff=0.7698;MQ=62.20;MQ0=19;MQRankSum=-1.540;QD=8.16;ReadPosRankSum=-1.950;VQSLOD=1.4495;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,25:9:15.05:244,15,0	0/0:4,0:4:12.04:0,12,226	0/0:37,0:32:96.23:0,96,1783	0/0:31,0:29:78.18:0,78,1437	0/0:33,0:33:99:0,99,1988	0/0:26,0:26:78.26:0,78,1534	0/0:29,0:29:87.29:0,87,1714	0/0:24,0:24:72.25:0,72,1449	0/0:40,0:40:99:0,120,2428	0/0:20,0:20:60.21:0,60,1219	0/0:17,0:17:51.17:0,51,1015	0/0:25,0:25:75.26:0,75,1497	0/0:22,0:22:66.23:0,66,1331	0/0:21,0:21:63.22:0,63,1265	1/1:0,17:6:6.02:98,6,0	0/0:17,0:17:51.18:0,51,1036	1/1:0,10:5:3.01:49,3,0	1/1:0,9:2:6.02:97,6,0	0/0:20,0:20:60.20:0,60,1179	0/0:27,0:27:81.28:0,81,1612	0/0:53,0:53:99:0,159,3073	0/0:28,0:28:84.29:0,84,1695	0/0:28,0:28:84.29:0,84,1657	0/0:20,0:20:60.19:0,60,1158	1/1:0,9:1:3.01:47,3,0	0/1:3,6:4:36.92:37,0,171	1/1:0,7:3:6.02:98,6,0	1/1:0,5:5:15.05:245,15,0
chr10	4536907	.	G	GGT	2964.38	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-9.321;DP=577;FS=16.997;HRun=0;HaplotypeScore=66.7066;InbreedingCoeff=0.9941;MQ=88.85;MQ0=1;MQRankSum=-4.365;QD=42.96;ReadPosRankSum=1.232;VQSLOD=3.8222;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:35:84.26:0,84,1120	0/0:5,0:5:15.05:0,15,203	0/0:25,0:24:54.16:0,54,713	0/0:27,0:26:51.14:0,51,815	0/0:30,0:30:87.24:0,87,1127	0/0:29,0:29:84.23:0,84,1102	0/0:13,0:13:36.12:0,36,487	0/0:19,0:19:42.13:0,42,555	0/0:16,0:16:48.13:0,48,618	0/0:16,0:16:39.12:0,39,514	0/0:12,0:12:33.11:0,33,446	0/0:16,0:16:42.14:0,42,568	0/0:16,0:16:36.12:0,36,487	0/0:18,0:18:51.17:0,51,689	0/0:17,0:17:51.16:0,51,675	0/0:17,0:17:45.13:0,45,579	0/0:26,0:26:66.22:0,66,892	0/0:25,0:25:66.21:0,66,877	0/0:18,0:18:48.15:0,48,633	0/0:22,0:22:66.22:0,66,890	0/0:38,0:38:99:0,105,1420	0/0:15,0:15:45.15:0,45,609	0/0:15,0:15:42.12:0,42,551	0/0:21,0:21:63.21:0,63,852	0/0:16,0:15:42.13:0,42,553	1/1:2,22:26:63.19:1062,63,0	1/1:1,25:24:69.24:1205,69,0	1/1:1,16:17:48.16:841,48,0
chr10	4537014	.	GAAA	G	800.37	PASS	AB=0.752;AC=6;AF=0.107;AN=56;BaseQRankSum=0.041;DP=460;FS=4.010;HRun=15;HaplotypeScore=84.1889;InbreedingCoeff=0.4377;MQ=68.09;MQ0=5;MQRankSum=-0.786;QD=9.10;ReadPosRankSum=2.832;VQSLOD=0.3453;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:12,12:26:3.42:200,0,3	0/0:8,0:9:24.04:0,24,369	0/0:33,0:13:9.08:0,9,150	0/1:18,0:13:3.09:3,0,139	0/0:25,0:29:60.89:0,61,715	0/0:7,0:8:21.05:0,21,293	0/0:16,0:17:45.15:0,45,739	0/0:11,0:15:20.21:0,20,159	0/0:16,0:18:30.94:0,31,732	0/0:20,0:20:45.05:0,45,593	0/0:14,0:14:30.05:0,30,430	0/0:12,0:13:39.13:0,39,596	0/0:10,0:10:30.10:0,30,468	0/0:19,0:20:51.13:0,51,776	0/1:10,8:18:3.48:377,0,3	0/0:16,0:17:45.13:0,45,717	0/0:16,1:21:11.27:0,11,422	1/1:5,11:16:10.79:253,11,0	0/0:16,0:17:27.06:0,27,397	0/0:12,0:14:33.46:0,33,357	0/0:10,0:10:18.04:0,18,292	0/0:14,0:13:24.06:0,24,360	0/0:12,0:12:27.05:0,27,383	0/0:16,0:18:41.83:0,42,569	0/1:5,5:10:9.07:87,0,9	0/0:21,0:21:38.10:0,38,462	0/0:10,0:10:23.93:0,24,265	0/0:8,0:8:17.62:0,18,194
chr10	4537016	.	A	AAAG	661.70	PASS	AB=0.905;AC=5;AF=0.089;AN=56;BaseQRankSum=0.545;DP=467;FS=5.423;HRun=0;HaplotypeScore=104.3149;InbreedingCoeff=0.3197;MQ=70.06;MQ0=5;MQRankSum=-3.769;QD=7.88;ReadPosRankSum=-1.764;VQSLOD=2.5212;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:39.85:0,40,372	0/0:9,0:9:24.06:0,24,340	0/1:37,0:15:14.99:15,0,185	0/0:17,0:12:22.06:0,22,171	0/0:28,0:28:57.68:0,58,642	0/0:10,0:10:25.54:0,26,256	0/0:17,0:17:50.97:0,51,547	0/0:15,0:15:14.46:0,14,210	0/0:19,0:19:52.90:0,53,613	0/0:21,0:20:59.92:0,60,579	0/0:11,0:11:12.74:0,13,259	0/0:13,0:13:36.89:0,37,376	0/0:10,0:10:30.04:0,30,376	0/0:19,0:19:53.86:0,54,593	0/0:20,0:20:38.56:0,39,358	0/0:16,0:16:45.10:0,45,566	0/0:22,0:22:54.03:0,54,620	0/0:15,0:15:32.95:0,33,340	0/0:17,0:17:42.58:0,43,393	0/0:14,0:14:16.73:0,17,239	0/0:11,0:10:24.04:0,24,299	0/0:13,0:12:26.37:0,26,302	0/0:10,0:10:26.63:0,27,234	0/0:17,0:17:47.32:0,47,483	0/0:12,0:12:11.68:0,12,128	0/1:15,8:24:55.26:372,0,55	1/1:10,1:11:17.68:277,18,0	0/1:11,0:11:46.81:118,0,47
chr10	4537377	.	A	AG	4387.99	PASS	AB=0.916;AC=21;AF=0.375;AN=56;BaseQRankSum=17.961;DP=1191;FS=18.397;HRun=1;HaplotypeScore=591.3656;InbreedingCoeff=-0.5713;MQ=45.75;MQ0=12;MQRankSum=-17.631;QD=4.99;ReadPosRankSum=-2.904;VQSLOD=1.8118;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:37,0:38:0.79:1,0,450	0/1:29,4:35:99:293,0,280	0/0:24,0:17:51.13:0,51,649	0/0:21,0:16:45.13:0,45,573	0/0:55,1:57:23.52:0,24,402	0/1:30,5:37:59.49:59,0,193	0/1:28,12:39:6.36:6,0,336	0/1:38,0:41:99:350,0,588	0/1:36,1:42:99:160,0,497	0/1:78,3:85:99:931,0,800	0/0:36,2:39:22.49:0,22,401	0/1:37,2:38:12.93:13,0,414	0/1:40,3:44:99:257,0,645	0/1:32,1:37:99:123,0,241	0/1:37,4:45:26.41:26,0,209	0/1:34,6:39:61.70:62,0,336	0/1:19,7:28:91.09:91,0,581	0/1:21,1:22:18.58:19,0,520	0/1:33,1:36:99:172,0,553	0/1:45,3:49:89.54:90,0,562	0/0:51,0:57:63.58:0,64,931	0/0:64,3:69:8.99:0,9,642	0/1:30,1:32:22.91:23,0,185	0/0:37,1:39:24.07:0,24,327	0/1:42,3:50:12.43:12,0,525	0/1:42,13:66:99:1200,0,507	0/1:22,14:37:99:393,0,177	0/1:23,1:24:99:106,0,397
chr10	4537899	.	T	TC	8962.52	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-11.573;DP=724;FS=2.945;HRun=2;HaplotypeScore=68.5101;InbreedingCoeff=0.9990;MQ=75.69;MQ0=0;MQRankSum=-2.743;QD=40.74;ReadPosRankSum=4.689;VQSLOD=4.8526;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,51:53:99:2160,151,0	0/0:10,0:10:30.09:0,30,372	0/0:26,0:26:75.22:0,75,908	0/0:19,0:19:28.91:0,29,564	0/0:30,0:30:87.27:0,87,1078	0/0:20,0:20:54.16:0,54,657	0/0:32,0:32:93.28:0,93,1140	0/0:24,0:24:66.20:0,66,808	0/0:17,0:17:51.16:0,51,632	0/0:29,0:29:81.25:0,81,1004	0/0:10,0:10:30.08:0,30,360	0/0:37,0:37:99:0,105,1301	0/0:30,0:30:87.27:0,87,1078	0/0:27,0:27:78.24:0,78,966	1/1:1,33:34:93.31:1339,93,0	0/0:29,0:29:84.26:0,84,1041	1/1:2,30:32:90.30:1296,90,0	1/1:0,28:28:81.27:1162,81,0	0/0:18,0:18:52.67:0,53,608	0/0:16,0:16:48.15:0,48,595	0/0:62,0:62:99:0,181,2230	0/0:31,0:31:93.29:0,93,1152	0/0:11,0:11:33.09:0,33,396	0/0:26,0:26:72.21:0,72,879	1/1:0,25:25:72.24:1019,72,0	1/1:1,24:25:72.24:1036,72,0	1/1:0,15:15:45.15:647,45,0	1/1:1,7:8:21.07:302,21,0
chr10	4538874	.	T	TCGTTAGTGG	4446.60	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-2.411;DP=589;FS=5.349;HRun=0;HaplotypeScore=171.5756;InbreedingCoeff=0.9933;MQ=88.88;MQ0=0;MQRankSum=-9.245;QD=108.45;ReadPosRankSum=-0.818;VQSLOD=4.6693;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:69.24:0,69,2088	0/0:11,0:11:33.11:0,33,939	0/0:36,0:34:93.13:0,93,2258	0/0:36,0:29:65.12:0,65,1690	0/0:19,0:19:57.20:0,57,1777	0/0:13,0:13:27.09:0,27,854	0/0:24,0:24:66.22:0,66,1838	0/0:32,0:32:93.31:0,93,2738	0/0:21,0:21:63.22:0,63,1957	0/0:12,0:12:36.11:0,36,1029	0/0:16,0:16:48.16:0,48,1518	0/0:25,0:25:75.23:0,75,2173	0/0:26,0:26:78.25:0,78,2389	0/0:18,0:18:54.19:0,54,1660	0/0:26,0:26:78.26:0,78,2351	0/0:24,0:24:72.22:0,72,2094	0/0:38,0:38:99:0,105,3159	0/0:18,0:18:54.17:0,54,1574	0/0:11,0:11:33.11:0,33,1007	0/0:21,0:21:57.18:0,57,1713	0/0:38,0:38:99:0,114,3357	0/0:16,0:16:48.16:0,48,1462	0/0:15,0:15:45.15:0,45,1410	0/0:20,0:20:57.20:0,57,1773	0/0:9,0:9:27.09:0,27,800	1/1:6,5:12:36.04:1405,36,0	1/1:7,12:23:51.17:2300,51,0	1/1:0,5:6:15.05:742,15,0
chr10	4540270	.	C	CGA	1565.40	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=9.997;DP=517;FS=0.548;HRun=0;HaplotypeScore=97.0217;InbreedingCoeff=0.8701;MQ=70.96;MQ0=13;MQRankSum=-4.906;QD=23.72;ReadPosRankSum=0.786;VQSLOD=3.9537;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:84.26:0,84,1168	0/0:8,0:8:21.07:0,21,296	0/0:32,0:20:33.73:0,34,581	0/0:42,0:29:21.78:0,22,488	0/0:17,0:17:42.13:0,42,577	0/0:18,0:18:42.14:0,42,606	0/0:19,0:18:42.13:0,42,580	0/0:26,0:26:66.10:0,66,911	0/0:19,0:19:40.37:0,40,550	0/0:33,0:33:92.22:0,92,1310	0/0:8,0:7:18.06:0,18,245	0/0:11,0:11:26.99:0,27,365	0/0:8,0:8:24.03:0,24,265	0/0:12,0:11:20.59:0,21,260	0/0:23,0:22:10.84:0,11,48	0/0:15,0:14:29.96:0,30,422	0/0:28,0:28:70.04:0,70,834	0/0:8,0:8:2.64:0,3,40	0/0:13,0:12:36.11:0,36,505	0/0:10,0:10:20.94:0,21,280	0/0:18,0:18:36.12:0,36,496	0/0:13,0:13:20.99:0,21,298	0/0:17,0:17:38.84:0,39,526	0/0:20,0:20:29.91:0,30,403	1/1:11,0:10:0.55:3,1,0	1/1:1,17:17:47.72:573,48,0	1/1:21,2:21:59.52:707,60,0	1/1:14,0:12:33.10:426,33,0
chr10	4540354	.	TG	T	17069.39	PASS	AB=0.875;AC=55;AF=0.982;AN=56;BaseQRankSum=-2.280;DP=551;FS=2.964;HRun=4;HaplotypeScore=108.4390;InbreedingCoeff=-0.0195;MQ=62.35;MQ0=0;MQRankSum=-2.419;QD=30.98;ReadPosRankSum=0.413;VQSLOD=4.4063;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,42:42:99:1475,123,0	1/1:1,7:8:15.05:180,15,0	1/1:5,2:5:6:52,6,0	0/1:6,1:7:20.82:28,0,21	1/1:0,20:20:48.15:576,48,0	1/1:2,15:17:39.12:468,39,0	1/1:1,31:32:90.28:1080,90,0	1/1:3,17:20:48.11:560,48,0	1/1:1,21:22:51.16:612,51,0	1/1:2,10:12:33.06:378,33,0	1/1:1,18:19:45.14:540,45,0	1/1:0,19:19:54.17:648,54,0	1/1:1,14:15:42.13:504,42,0	1/1:1,16:17:42.13:504,42,0	1/1:1,26:27:75.23:900,75,0	1/1:0,21:21:57.17:684,57,0	1/1:1,30:31:90.28:1080,90,0	1/1:0,15:15:42.13:504,42,0	1/1:1,14:14:39.12:467,39,0	1/1:0,16:16:36.11:432,36,0	1/1:1,33:34:93.29:1116,93,0	1/1:0,17:17:42.13:504,42,0	1/1:1,15:16:42.13:504,42,0	1/1:3,25:28:69.21:828,69,0	1/1:0,14:14:42.13:504,42,0	1/1:0,21:21:48.14:576,48,0	1/1:1,22:23:66.20:791,66,0	1/1:0,16:16:48.15:576,48,0
chr10	4540625	.	G	GTCTCTCTCTCTCTC	2624.66	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=3.786;DP=571;FS=23.369;HRun=0;HaplotypeScore=203.7545;InbreedingCoeff=0.8100;MQ=66.60;MQ0=12;MQRankSum=-5.554;QD=14.58;ReadPosRankSum=-4.372;VQSLOD=0.4387;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:27:12.50:210,13,0	0/0:9,0:9:9.03:0,9,258	0/0:22,0:14:8.70:0,9,214	0/0:31,0:20:5.99:0,6,97	0/0:15,0:15:24.08:0,24,914	0/0:18,0:18:30.57:0,31,968	0/0:25,0:25:30.10:0,30,1046	1/1:42,0:40:32.17:760,32,0	0/0:23,0:23:39.11:0,39,1353	0/0:29,0:29:42.13:0,42,1529	0/0:9,0:8:9.03:0,9,312	0/0:13,0:13:20.71:0,21,610	0/0:6,0:6:9.01:0,9,249	0/0:16,0:19:32.54:0,33,996	1/1:14,0:14:3.01:46,3,0	0/0:27,0:27:39.13:0,39,1287	1/1:10,0:8:9.03:337,9,0	1/1:4,0:4:2.98:22,3,0	0/0:13,0:15:12.03:0,12,347	0/0:12,0:12:11.09:0,11,251	0/0:44,0:44:60.67:0,61,2026	0/0:18,0:17:21.07:0,21,724	0/0:17,0:17:27.06:0,27,772	0/0:39,0:39:45.14:0,45,1555	1/1:15,0:14:3.01:127,3,0	1/1:27,0:26:30.08:1004,30,0	1/1:11,5:17:9.03:273,9,0	1/1:18,0:16:6.37:35,6,0
chr10	4540657	.	C	CTGTGTGTG	914.76	PASS	AB=0.984;AC=10;AF=0.200;AN=50;BaseQRankSum=4.600;DP=591;FS=29.657;HRun=0;HaplotypeScore=147.4641;InbreedingCoeff=0.5538;MQ=48.05;MQ0=18;MQRankSum=-0.475;QD=8.63;ReadPosRankSum=-1.629;VQSLOD=0.9737;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:25:6.71:62,7,0	0/0:6,0:6:9.03:0,9,225	./.	./.	0/0:24,0:24:30.10:0,30,731	0/0:19,0:19:0.25:0,0,186	0/0:27,0:27:11.85:0,12,262	0/0:36,0:34:18.04:0,18,285	0/0:24,0:24:30.54:0,31,608	0/0:27,0:25:17.63:0,18,402	0/0:18,0:14:15.05:0,15,349	0/0:21,0:21:11.95:0,12,583	0/0:12,0:12:15.02:0,15,300	0/0:21,0:22:20.34:0,20,462	1/1:15,0:15:17.88:514,18,0	0/0:30,0:30:42:0,42,857	0/1:11,0:9:10.05:10,0,83	1/1:6,0:6:9:139,9,0	0/0:21,0:19:11.71:0,12,278	0/0:14,0:14:14.75:0,15,267	0/0:51,0:51:56.78:0,57,1235	0/0:28,0:27:10.12:0,10,625	0/0:16,0:16:18.04:0,18,390	0/0:39,0:39:25.76:0,26,1020	./.	0/1:29,0:24:55.70:290,0,56	1/1:15,0:15:6.28:46,6,0	0/0:13,0:11:2.79:0,3,80
chr10	4542020	.	A	AG	433.72	PASS	AB=0.857;AC=5;AF=0.089;AN=56;BaseQRankSum=3.084;DP=756;FS=2.410;HRun=3;HaplotypeScore=93.8868;InbreedingCoeff=-0.1135;MQ=52.99;MQ0=34;MQRankSum=-0.893;QD=2.31;ReadPosRankSum=0.095;VQSLOD=-0.3172;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,2:25:23.19:0,23,491	0/0:10,0:10:21.03:0,21,227	0/0:26,0:1:3.01:0,3,36	0/0:24,0:4:9.02:0,9,88	0/0:6,0:6:12.04:0,12,143	0/0:25,0:24:63.18:0,63,743	0/0:38,0:38:99:0,108,1250	0/1:34,0:33:34.69:35,0,618	0/0:30,0:30:75.07:0,75,995	0/0:15,0:14:30.01:0,30,341	0/0:8,0:6:9.03:0,9,107	0/0:39,0:39:99:0,108,1274	0/0:24,1:25:30.21:0,30,777	0/0:50,0:49:99:0,135,1586	0/1:26,7:29:95.40:95,0,634	0/0:32,0:32:90.28:0,90,1079	0/1:38,17:42:63.94:64,0,926	0/1:35,8:42:99:238,0,700	0/0:13,0:8:21.06:0,21,252	0/0:10,0:10:24.07:0,24,287	0/0:68,0:63:99:0,156,1839	0/0:13,0:12:33.09:0,33,383	0/0:14,0:13:39.12:0,39,467	0/0:29,0:29:81.25:0,81,971	0/1:19,4:23:99:119,0,398	0/0:23,1:20:21.18:0,21,465	0/0:28,0:25:66.20:0,66,790	0/0:12,0:10:11.90:0,12,109
chr10	4542037	.	A	AG	2715.24	PASS	AB=0.650;AC=9;AF=0.173;AN=52;BaseQRankSum=6.039;DP=612;FS=2.079;HRun=3;HaplotypeScore=71.4763;InbreedingCoeff=0.1900;MQ=51.00;MQ0=45;MQRankSum=-5.206;QD=15.88;ReadPosRankSum=1.977;VQSLOD=3.2531;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/0:3,0:3:8.99:0,9,93	./.	0/0:21,0:2:6.02:0,6,71	0/0:1,0:1:3.01:0,3,36	0/0:17,0:16:45.14:0,45,540	0/0:37,0:30:87.23:0,87,1010	0/0:10,0:10:4.10:0,4,232	0/0:29,0:29:81.25:0,81,972	0/0:12,0:7:18.06:0,18,216	0/0:5,0:3:6.02:0,6,72	0/0:38,0:38:99:0,108,1296	0/0:25,0:25:66.19:0,66,780	0/0:47,0:46:99:0,123,1458	0/1:12,16:22:53.60:558,0,54	0/0:25,0:25:69.19:0,69,806	0/1:23,26:35:99:632,0,147	0/1:15,26:37:99:718,0,237	0/0:13,0:9:18.53:0,19,216	0/0:7,0:6:18.05:0,18,206	0/0:65,1:56:89.71:0,90,1413	0/0:15,0:11:23.96:0,24,258	0/0:10,0:9:27.05:0,27,309	0/0:26,0:25:75.23:0,75,900	1/1:5,3:6:9.02:109,9,0	0/1:7,3:9:22.03:142,0,22	0/1:7,18:22:25.85:610,0,26	1/1:3,7:7:6.02:84,6,0
chr10	4542107	.	A	AG	748.22	PASS	AB=0.782;AC=5;AF=0.093;AN=54;BaseQRankSum=6.517;DP=683;FS=2.501;HRun=3;HaplotypeScore=69.6422;InbreedingCoeff=-0.1240;MQ=45.95;MQ0=73;MQRankSum=-4.511;QD=4.77;ReadPosRankSum=0.168;VQSLOD=0.2729;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:14,6:8:6.02:0,6,72	0/0:8,0:7:18.04:0,18,206	0/0:27,0:3:4.41:0,4,69	0/0:24,0:2:6.02:0,6,71	0/0:16,0:8:18.01:0,18,200	0/0:12,0:10:27.08:0,27,324	0/0:33,0:24:69.20:0,69,816	0/1:17,1:9:18.85:19,0,192	0/0:28,0:28:75.21:0,75,884	0/0:12,0:8:24.07:0,24,288	0/0:11,0:9:12.04:0,12,144	0/0:36,0:36:90.23:0,90,1052	0/0:31,0:28:75.18:0,75,869	0/0:36,0:34:99:0,102,1202	0/1:31,16:32:99:172,0,485	0/0:27,0:27:78.24:0,78,935	0/1:29,19:31:99:284,0,272	0/0:27,1:17:33.98:0,34,390	0/0:16,0:10:30.07:0,30,338	0/0:11,0:8:21.06:0,21,252	0/0:70,0:58:99:0,135,1557	0/0:18,0:17:36.10:0,36,424	0/0:13,0:12:33.08:0,33,382	0/0:30,0:30:90.22:0,90,1041	0/0:11,1:4:6.02:0,6,72	0/1:13,4:7:63.54:64,0,132	0/1:15,12:19:99:325,0,237	./.
chr10	4542142	.	A	AG	1213.87	PASS	AB=0.755;AC=6;AF=0.107;AN=56;BaseQRankSum=6.987;DP=735;FS=11.386;HRun=3;HaplotypeScore=84.4610;InbreedingCoeff=-0.1273;MQ=49.81;MQ0=63;MQRankSum=0.858;QD=5.89;ReadPosRankSum=6.269;VQSLOD=-0.6670;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:15:30.07:0,30,348	0/0:8,0:7:11.60:0,12,143	0/0:28,0:4:11.96:0,12,103	0/0:24,0:6:14.97:0,15,145	0/0:17,0:12:23.15:0,23,274	0/0:13,0:12:33.05:0,33,379	0/0:31,0:25:54.11:0,54,631	0/0:7,2:4:9.02:0,9,98	0/0:31,0:30:87.27:0,87,1043	0/0:15,0:13:32.31:0,32,364	0/0:15,0:13:33.10:0,33,396	0/0:34,0:34:93.26:0,93,1093	0/0:32,0:29:78.23:0,78,924	0/0:37,0:35:99:0,105,1234	0/1:36,17:43:99:477,0,670	0/0:34,0:34:99:0,99,1164	0/1:39,18:44:99:241,0,718	0/1:14,13:20:99:288,0,224	0/0:19,0:7:21.02:0,21,224	0/0:14,0:12:33.09:0,33,383	0/0:77,0:66:99:0,169,2004	0/0:17,0:14:30.09:0,30,360	0/0:7,0:7:21.06:0,21,252	0/0:36,0:36:99:0,105,1246	0/1:7,6:6:68.97:69,0,92	0/1:19,3:15:38.85:39,0,388	0/1:24,10:27:99:225,0,460	0/0:9,1:7:14.78:0,15,156
chr10	4542157	.	CA	C	1045.29	PASS	AB=0.762;AC=4;AF=0.071;AN=56;BaseQRankSum=5.434;DP=796;FS=5.898;HRun=2;HaplotypeScore=93.8865;InbreedingCoeff=-0.0771;MQ=54.51;MQ0=51;MQRankSum=-1.077;QD=8.64;ReadPosRankSum=1.183;VQSLOD=1.1934;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:29:73.42:0,73,1011	0/0:10,0:10:21.07:0,21,315	0/0:31,0:12:16.40:0,16,319	0/0:28,0:13:36.08:0,36,478	0/0:21,0:18:48.11:0,48,659	0/0:12,0:11:33.11:0,33,494	0/0:25,0:19:57.18:0,57,835	0/0:17,0:11:33.10:0,33,460	0/0:30,0:30:84.76:0,85,1247	0/0:17,0:17:51.16:0,51,744	0/0:17,0:15:36.12:0,36,531	0/0:37,0:37:99:0,105,1529	0/0:31,0:29:84.13:0,84,1183	0/0:35,0:34:96.32:0,96,1416	0/0:55,0:47:99:0,105,1715	0/0:38,0:38:99:0,114,1708	0/1:38,17:44:99:583,0,513	0/0:32,0:25:55.80:0,56,933	0/0:24,0:16:45.13:0,45,628	0/0:14,0:12:33.11:0,33,493	0/0:82,0:73:99:0,190,2736	0/0:22,0:20:57.18:0,57,833	0/0:10,0:10:30.09:0,30,421	0/0:34,0:34:99:0,99,1445	0/0:20,0:14:36.10:0,36,502	0/1:21,5:21:99:176,0,523	0/1:19,11:23:99:256,0,434	0/1:6,4:7:29.90:141,0,30
chr10	4542384	.	G	GACACAC	762.35	PASS	AB=1.000;AC=8;AF=0.143;AN=56;BaseQRankSum=5.339;DP=521;FS=0.000;HRun=0;HaplotypeScore=132.7326;InbreedingCoeff=0.2009;MQ=69.20;MQ0=8;MQRankSum=-3.169;QD=5.73;ReadPosRankSum=-2.766;VQSLOD=1.7883;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:29,9:37:39.53:813,40,0	0/0:11,0:10:21.07:0,21,428	0/0:19,0:13:33.11:0,33,617	0/0:51,0:27:64.74:0,65,1226	0/0:19,0:17:42.14:0,42,925	0/0:20,0:20:47.85:0,48,1047	0/0:21,0:21:57.17:0,57,1186	0/1:30,0:30:10.17:10,0,410	0/0:12,0:12:26.61:0,27,561	0/0:14,0:14:36.11:0,36,751	0/0:20,0:20:48.16:0,48,985	0/0:16,0:16:39.12:0,39,853	0/0:18,0:18:39.13:0,39,814	0/0:8,0:8:21.07:0,21,466	0/1:14,0:14:0.66:1,0,413	0/0:18,0:18:51.11:0,51,989	0/1:16,0:16:35.36:35,0,447	0/1:13,0:13:21.46:21,0,361	0/0:14,0:14:31.10:0,31,823	0/0:23,0:23:63.18:0,63,1286	0/0:21,0:21:51.16:0,51,1051	0/0:14,0:14:39.10:0,39,806	0/0:8,0:8:24.08:0,24,499	0/0:32,0:32:78.22:0,78,1574	0/1:13,0:13:0.35:0,0,429	0/0:16,0:15:36.81:0,37,344	0/0:13,0:13:26.63:0,27,180	0/1:9,0:9:4.64:5,0,57
chr10	4542387	.	ACT	A	219.42	PASS	AB=0.900;AC=13;AF=0.241;AN=54;BaseQRankSum=3.292;DP=580;FS=0.000;HRun=0;HaplotypeScore=98.3231;InbreedingCoeff=-0.1869;MQ=63.50;MQ0=13;MQRankSum=3.467;QD=0.96;ReadPosRankSum=1.629;VQSLOD=1.7627;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:42:5.02:0,5,30	0/0:9,0:9:9.02:0,9,117	./.	0/0:52,0:25:3.01:0,3,42	0/1:17,0:16:21.04:21,0,194	0/1:14,5:20:37.85:38,0,455	0/1:19,1:21:23.44:23,0,226	0/0:38,0:38:33:0,33,221	0/1:12,2:14:8.90:9,0,246	0/1:11,2:13:25.34:25,0,87	0/0:18,0:19:3.47:0,3,339	0/0:14,0:14:11.20:0,11,188	0/1:19,0:19:7.56:8,0,250	1/1:9,0:9:5.83:37,6,0	0/0:18,0:22:3:0,3,26	0/1:16,4:20:61.03:61,0,385	0/0:20,0:21:26.51:0,27,192	0/0:10,0:18:14.96:0,15,123	0/0:15,0:14:12.03:0,12,155	0/1:22,0:23:0.82:1,0,373	0/1:22,3:25:3.72:4,0,260	0/1:14,0:14:21.39:21,0,104	0/0:9,0:10:14.46:0,14,137	0/1:26,4:32:99:110,0,500	0/0:12,0:14:3:0,3,26	0/0:18,0:17:11.95:0,12,94	0/0:23,0:22:29.66:0,30,200	0/0:12,0:10:10.24:0,10,84
chr10	4542444	.	CA	C	1652.05	PASS	AB=0.807;AC=9;AF=0.161;AN=56;BaseQRankSum=6.177;DP=544;FS=2.169;HRun=10;HaplotypeScore=83.4675;InbreedingCoeff=0.6064;MQ=67.15;MQ0=0;MQRankSum=-0.726;QD=14.12;ReadPosRankSum=2.287;VQSLOD=4.0978;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:39:88.39:0,88,465	0/0:6,0:6:12.03:0,12,133	0/0:25,0:15:23.93:0,24,236	0/0:22,0:16:0.03:0,0,109	0/0:21,0:21:51.12:0,51,552	0/0:28,0:28:72.19:0,72,796	0/0:17,0:17:39.43:0,39,405	0/0:4,0:20:48.58:0,49,256	0/0:15,0:15:33.09:0,33,365	0/0:18,0:18:42.10:0,42,453	0/0:26,0:26:63.06:0,63,646	0/0:10,0:10:24.06:0,24,265	0/0:16,0:16:42.09:0,42,449	0/0:20,1:21:30.96:0,31,546	0/0:17,0:17:39.07:0,39,408	0/1:15,1:16:9.90:10,0,309	1/1:3,26:29:71.66:610,72,0	0/0:18,0:16:32.90:0,33,334	0/1:11,1:12:2.01:2,0,195	0/0:19,0:19:45.11:0,45,489	0/0:10,0:10:17.94:0,18,182	0/0:19,0:19:53.35:0,53,560	0/0:18,0:18:51.12:0,51,555	0/0:30,2:32:72.19:0,72,797	0/0:9,0:8:13.28:0,13,136	0/1:5,19:24:3.37:428,0,3	1/1:2,20:22:53.82:468,54,0	1/1:1,13:14:5.81:279,6,0
chr10	4543126	.	AAC	A	931.60	PASS	AB=0.938;AC=3;AF=0.054;AN=56;BaseQRankSum=8.795;DP=735;FS=28.791;HRun=0;HaplotypeScore=91.5970;InbreedingCoeff=0.6520;MQ=76.51;MQ0=0;MQRankSum=-8.282;QD=18.27;ReadPosRankSum=-0.134;VQSLOD=1.8335;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,30:35:84.18:1024,84,0	0/0:10,0:10:21.05:0,21,304	0/0:31,0:30:60.10:0,60,932	0/0:32,0:32:47.35:0,47,807	0/0:23,0:23:66.22:0,66,1083	0/0:19,0:19:48.07:0,48,691	0/0:36,0:36:99:0,99,1634	0/0:36,0:36:78.27:0,78,1295	0/0:25,0:25:72.25:0,72,1190	0/0:30,0:30:81.28:0,81,1340	0/0:21,0:21:48.15:0,48,770	0/0:22,0:22:54.18:0,54,880	0/0:21,0:21:57.17:0,57,904	0/0:30,0:30:75.26:0,75,1240	0/0:26,0:26:75.22:0,75,1183	0/0:32,0:32:84.27:0,84,1360	0/0:42,0:42:99:0,114,1866	0/0:19,0:19:54.16:0,54,858	0/1:14,1:15:10.76:11,0,371	0/0:19,0:19:51.15:0,51,793	0/0:45,0:45:99:0,117,1831	0/0:24,0:24:54.18:0,54,878	0/0:12,0:12:36.12:0,36,594	0/0:40,0:40:99:0,105,1701	0/0:20,1:21:13.32:0,13,759	0/0:37,0:37:96.33:0,96,1585	0/0:21,0:21:54.17:0,54,855	0/0:10,0:10:21.05:0,21,323
chr10	4543222	.	A	AT	564.82	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.031;DP=681;FS=36.089;HRun=0;HaplotypeScore=69.9760;InbreedingCoeff=0.9997;MQ=62.69;MQ0=7;MQRankSum=-5.605;QD=23.53;ReadPosRankSum=-1.967;VQSLOD=1.5038;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,23:24:51.08:660,51,0	0/0:11,0:11:33.11:0,33,456	0/0:36,0:23:66.21:0,66,906	0/0:26,0:15:45.15:0,45,621	0/0:26,0:26:78.26:0,78,1091	0/0:16,0:16:48.16:0,48,668	0/0:26,0:26:78.26:0,78,1091	0/0:30,0:30:90.29:0,90,1231	0/0:24,0:24:72.23:0,72,990	0/0:24,0:24:72.24:0,72,1007	0/0:21,0:21:63.21:0,63,881	0/0:19,0:19:54.16:0,54,733	0/0:18,0:18:54.18:0,54,752	0/0:26,0:26:78.25:0,78,1074	0/0:26,0:26:75.25:0,75,1040	0/0:23,0:23:69.23:0,69,963	0/0:32,0:32:93.31:0,93,1298	0/0:17,0:17:51.17:0,51,713	0/0:20,0:19:54.14:0,54,733	0/0:18,0:18:54.17:0,54,738	0/0:43,0:43:99:0,129,1802	0/0:28,0:28:84.28:0,84,1171	0/0:24,0:24:72.24:0,72,1004	0/0:24,0:24:66.22:0,66,921	0/0:20,0:20:57.17:0,57,764	0/0:30,0:30:90.30:0,90,1259	0/0:28,0:28:84.28:0,84,1170	0/0:21,0:21:63.15:0,63,840
chr10	4544648	.	AG	A	2574.36	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.063;DP=725;FS=3.340;HRun=3;HaplotypeScore=72.9903;InbreedingCoeff=0.9989;MQ=73.98;MQ0=1;MQRankSum=-1.353;QD=32.59;ReadPosRankSum=1.296;VQSLOD=4.0359;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,99,1405	0/0:8,0:8:24.08:0,24,346	0/0:25,0:22:56.49:0,56,721	0/0:23,0:21:54.16:0,54,722	0/0:31,0:31:90.29:0,90,1279	0/0:25,0:25:72.21:0,72,1013	0/0:26,0:25:75.25:0,75,1080	0/0:29,0:29:84.27:0,84,1193	0/0:32,0:32:90.30:0,90,1294	0/0:32,0:32:96.32:0,96,1383	0/0:24,0:24:72.24:0,72,1036	0/0:24,0:24:72.24:0,72,1033	0/0:22,0:22:60.20:0,60,864	0/0:24,0:24:69.23:0,69,994	1/1:2,25:27:43.85:896,44,0	0/0:23,0:23:69.23:0,69,992	0/0:26,0:26:75.24:0,75,1060	1/1:2,28:30:67.55:1041,68,0	0/0:25,0:25:72.24:0,72,1036	0/0:19,0:19:57.19:0,57,820	0/0:42,0:42:99:0,123,1752	0/0:25,0:25:75.25:0,75,1064	0/0:23,0:23:69.23:0,69,993	0/0:29,0:29:84.27:0,84,1192	1/1:0,22:22:63.20:781,63,0	0/0:28,0:28:78.25:0,78,1107	0/0:34,0:34:99:0,99,1423	0/0:11,0:11:27.09:0,27,389
chr10	4544793	.	GC	G	2120.96	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.154;DP=714;FS=1.726;HRun=1;HaplotypeScore=73.7868;InbreedingCoeff=0.9950;MQ=59.73;MQ0=3;MQRankSum=0.463;QD=35.95;ReadPosRankSum=-0.120;VQSLOD=3.6466;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,154,2439	0/0:6,0:6:18.06:0,18,287	0/0:24,0:12:32.91:0,33,433	0/0:25,0:12:33.08:0,33,491	0/0:23,0:23:69.22:0,69,1069	0/0:15,0:15:42.14:0,42,669	0/0:27,0:26:78.25:0,78,1223	1/1:0,15:15:45.12:607,45,0	0/0:26,0:26:75.26:0,75,1194	0/0:26,0:26:78.27:0,78,1245	0/0:15,0:15:43.96:0,44,676	0/0:29,0:29:87.30:0,87,1385	0/0:18,0:18:54.17:0,54,839	0/0:25,0:25:72.25:0,72,1151	0/0:28,0:28:84.27:0,84,1319	0/0:22,0:22:66.23:0,66,1055	1/1:0,44:44:99:1636,117,0	0/0:31,0:31:85.51:0,86,1405	0/0:25,0:25:72.24:0,72,1126	0/0:27,0:27:81.28:0,81,1291	0/0:42,0:42:99:0,123,1934	0/0:25,0:24:72.23:0,72,1117	0/0:22,0:22:63.20:0,63,978	0/0:44,0:44:99:0,132,2049	0/0:19,0:19:57.19:0,57,909	0/0:20,0:20:60.20:0,60,960	0/0:31,0:31:93.30:0,93,1459	0/0:9,0:9:27.09:0,27,431
chr10	4544966	.	A	AGTT	3414.62	PASS	AC=4;AF=0.074;AN=54;BaseQRankSum=-4.697;DP=701;FS=1.740;HRun=0;HaplotypeScore=103.3181;InbreedingCoeff=0.9958;MQ=90.34;MQ0=0;MQRankSum=-5.289;QD=53.35;ReadPosRankSum=-2.142;VQSLOD=5.2342;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,132,2092	0/0:7,0:7:18.06:0,18,286	0/0:31,0:31:74.79:0,75,1139	0/0:25,0:25:65.93:0,66,996	0/0:24,0:24:69.24:0,69,1088	0/0:15,0:15:39.13:0,39,618	0/0:31,0:31:90.31:0,90,1417	1/1:9,23:33:81.25:1648,81,0	0/0:24,0:24:69.24:0,69,1091	0/0:29,0:29:81.27:0,81,1265	0/0:27,0:27:72.20:0,72,1092	0/0:16,0:16:48.16:0,48,761	0/0:22,0:22:66.21:0,66,1013	0/0:23,0:23:63.20:0,63,976	0/0:31,0:31:90.31:0,90,1427	0/0:25,0:25:69.20:0,69,1028	1/1:4,27:31:81.28:1767,81,0	0/0:25,0:25:72.25:0,72,1142	0/0:20,0:20:57.19:0,57,881	0/0:22,0:22:63.20:0,63,973	0/0:44,0:44:99:0,120,1895	0/0:25,0:25:72.25:0,72,1142	0/0:19,0:19:54.18:0,54,856	0/0:33,0:33:93.32:0,93,1471	0/0:19,0:19:57.19:0,57,904	0/0:19,0:19:57.19:0,57,904	0/0:31,0:30:87.28:0,87,1356	./.
chr10	4545021	.	GGTGGGGT	G	1051.18	PASS	AB=0.863;AC=2;AF=0.036;AN=56;BaseQRankSum=7.104;DP=706;FS=4.462;HRun=0;HaplotypeScore=177.3398;InbreedingCoeff=-0.0372;MQ=86.51;MQ0=0;MQRankSum=-6.857;QD=15.23;ReadPosRankSum=-2.250;VQSLOD=2.2905;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,135,5174	0/0:10,0:10:30.09:0,30,1089	0/0:22,0:22:57.20:0,57,2168	0/0:29,0:29:81.23:0,81,2859	0/0:28,0:28:75.26:0,75,2847	0/0:19,0:19:54.19:0,54,2125	0/0:37,0:37:99:0,99,3831	0/1:28,17:45:99:1057,0,2044	0/0:20,0:20:60.21:0,60,2342	0/0:24,0:24:66.21:0,66,2320	0/0:17,0:17:48.16:0,48,1787	0/0:23,0:23:69.24:0,69,2689	0/0:29,0:29:87.30:0,87,3381	0/0:25,0:25:69.23:0,69,2730	0/0:24,0:24:72.25:0,72,2847	0/0:26,0:26:75.24:0,75,2828	0/1:24,0:24:83.09:83,0,840	0/0:27,0:27:81.26:0,81,2988	0/0:25,0:25:69.20:0,69,2586	0/0:15,0:15:39.13:0,39,1515	0/0:45,0:45:99:0,135,5115	0/0:24,0:24:60.21:0,60,2380	0/0:17,0:17:39.13:0,39,1528	0/0:25,0:25:69.24:0,69,2599	0/0:22,0:22:60.21:0,60,2268	0/0:20,0:20:60.20:0,60,2120	0/0:27,0:27:72.25:0,72,2789	0/0:7,0:7:21.07:0,21,833
chr10	4545028	.	T	TGTTAAATGGTTAAAG	8728.57	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.426;DP=702;FS=3.595;HRun=0;HaplotypeScore=296.5120;InbreedingCoeff=0.9973;MQ=88.26;MQ0=0;MQRankSum=-11.519;QD=128.36;ReadPosRankSum=-4.189;VQSLOD=3.6817;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,150,5851	0/0:10,0:10:27.09:0,27,1132	0/0:26,0:26:69.23:0,69,2396	0/0:28,0:28:81.25:0,81,2910	0/0:29,0:29:77.97:0,78,3299	0/0:18,0:18:54.17:0,54,2219	0/0:37,0:37:99:0,105,4254	1/1:45,0:45:99:4931,129,0	0/0:21,0:21:60.21:0,60,2522	0/0:20,0:20:60.18:0,60,2509	0/0:15,0:15:42.14:0,42,1810	0/0:23,0:23:66.23:0,66,2857	0/0:29,0:29:87.30:0,87,3754	0/0:26,0:26:72.37:0,72,3105	0/0:25,0:25:75.23:0,75,3054	0/0:25,0:25:69.24:0,69,2900	1/1:15,8:23:63.19:3798,63,0	0/0:26,0:26:75.26:0,75,3130	0/0:24,0:24:72.24:0,72,2875	0/0:15,0:15:42.14:0,42,1793	0/0:47,0:47:99:0,138,5370	0/0:21,0:21:60.21:0,60,2572	0/0:16,0:16:40.38:0,40,1776	0/0:24,0:24:69.21:0,69,2671	0/0:20,0:20:57.20:0,57,2436	0/0:18,0:18:51.17:0,51,2007	0/0:28,0:28:78.25:0,78,3111	0/0:9,0:9:21.07:0,21,945
chr10	4546033	.	CAAG	C	65.03	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.254;DP=659;FS=4.687;HRun=0;HaplotypeScore=107.9451;InbreedingCoeff=0.9932;MQ=80.19;MQ0=0;MQRankSum=-2.175;QD=7.23;ReadPosRankSum=-1.462;VQSLOD=2.6672;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,132,3202	0/0:13,0:13:39.13:0,39,913	0/0:35,0:34:73:0,73,1899	0/0:25,0:25:49.83:0,50,1136	0/0:23,0:23:69.24:0,69,1643	0/0:23,0:23:63.22:0,63,1506	0/0:29,0:29:84.25:0,84,1980	0/0:32,0:32:87.28:0,87,1979	0/0:16,0:16:48.16:0,48,1145	0/0:21,0:21:63.22:0,63,1553	0/0:11,0:11:33.11:0,33,810	0/0:42,0:42:99:0,126,3060	0/0:22,0:22:66.23:0,66,1556	0/0:18,0:18:54.19:0,54,1317	0/0:19,0:19:57.17:0,57,1290	0/0:22,0:22:66.23:0,66,1590	1/1:5,4:9:19.10:156,19,0	0/0:13,0:13:36.12:0,36,887	0/0:22,0:22:66.23:0,66,1550	0/0:15,0:15:45.15:0,45,1109	0/0:53,0:53:99:0,157,3767	0/0:19,0:19:57.17:0,57,1232	0/0:16,0:16:48.16:0,48,1122	0/0:37,0:37:99:0,108,2502	0/0:16,0:16:48.16:0,48,1143	0/0:28,0:28:84.28:0,84,2004	0/0:16,0:16:48.16:0,48,1180	0/0:18,0:18:54.18:0,54,1260
chr10	4546044	.	ATGGT	A	44.63	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.846;DP=670;FS=0.000;HRun=0;HaplotypeScore=123.3906;InbreedingCoeff=0.9712;MQ=83.68;MQ0=0;MQRankSum=-2.300;QD=5.58;ReadPosRankSum=0.053;VQSLOD=1.9358;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,148,4119	0/0:13,0:13:39.13:0,39,1053	0/0:35,0:34:96.77:0,97,2529	0/0:29,0:29:64.21:0,64,1603	0/0:22,0:22:63.20:0,63,1677	0/0:25,0:25:72.25:0,72,1987	0/0:30,0:30:87.24:0,87,2389	0/0:27,0:27:66.17:0,66,1720	0/0:17,0:17:51.11:0,51,1343	0/0:20,0:20:60.21:0,60,1736	0/0:13,0:13:39.13:0,39,1108	0/0:39,0:39:99:0,117,3349	0/0:22,0:22:63.22:0,63,1789	0/0:20,0:20:60.21:0,60,1675	0/0:17,0:17:51.15:0,51,1312	0/0:21,0:21:63.22:0,63,1806	1/1:3,5:8:12.46:131,12,0	0/0:14,0:14:42.11:0,42,1150	0/0:25,0:25:72.23:0,72,1941	0/0:15,0:15:45.14:0,45,1226	0/0:50,0:50:99:0,147,4178	0/0:18,0:18:54.19:0,54,1549	0/0:21,0:21:60.21:0,60,1708	0/0:35,0:35:99:0,105,2879	0/0:16,0:16:48.16:0,48,1384	0/0:27,0:27:81.28:0,81,2318	0/0:19,0:19:57.20:0,57,1622	0/0:21,0:21:63.22:0,63,1815
chr10	4546075	.	GCTGAGCATC	G	1277.43	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.864;DP=671;FS=4.707;HRun=0;HaplotypeScore=193.3968;InbreedingCoeff=0.9965;MQ=89.50;MQ0=0;MQRankSum=-5.155;QD=44.05;ReadPosRankSum=-1.940;VQSLOD=2.9476;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,111,5191	0/0:11,0:11:30.10:0,30,1374	0/0:21,0:21:45.13:0,45,1806	0/0:35,0:37:45.67:0,46,2328	0/0:21,0:21:54.19:0,54,2539	0/0:23,0:23:60.21:0,60,2796	0/0:25,0:25:69.24:0,69,3044	1/1:7,8:16:24.08:716,24,0	0/0:15,0:15:45.15:0,45,2131	0/0:25,0:25:63.22:0,63,2974	0/0:9,0:9:24.08:0,24,1146	0/0:38,0:38:93.32:0,93,4210	0/0:24,0:24:66.23:0,66,3114	0/0:18,0:18:41.86:0,42,1718	0/0:20,0:20:57.20:0,57,2596	0/0:26,0:26:72.25:0,72,3223	1/1:4,9:13:24.08:682,24,0	0/0:13,0:13:36.12:0,36,1658	0/0:23,0:23:69.24:0,69,3004	0/0:18,0:18:51.18:0,51,2331	0/0:54,0:54:99:0,144,6101	0/0:19,0:19:51.18:0,51,2259	0/0:22,0:22:54.17:0,54,2387	0/0:29,0:29:84.29:0,84,3750	0/0:29,0:29:78.27:0,78,3593	0/0:33,0:33:90.31:0,90,4134	0/0:23,0:23:60.21:0,60,2702	0/0:21,0:21:63.22:0,63,2994
chr10	4546143	.	TA	T	1931.75	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=11.633;DP=686;FS=0.000;HRun=2;HaplotypeScore=74.5737;InbreedingCoeff=0.9916;MQ=81.08;MQ0=0;MQRankSum=-3.728;QD=32.20;ReadPosRankSum=-2.011;VQSLOD=2.7672;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,126,1887	0/0:6,0:6:14.95:0,15,176	0/0:18,0:18:54.18:0,54,798	0/0:18,0:18:48.13:0,48,650	0/0:26,0:26:72.24:0,72,1075	0/0:23,0:23:69.22:0,69,1014	0/0:32,0:32:93.30:0,93,1372	1/1:0,32:32:96.26:1202,96,0	0/0:28,0:28:84.25:0,84,1234	0/0:28,0:28:81.25:0,81,1154	0/0:15,0:15:45.15:0,45,674	0/0:27,0:27:81.26:0,81,1192	0/0:21,0:21:59.74:0,60,887	0/0:14,0:14:39.13:0,39,584	0/0:17,0:17:51.17:0,51,746	0/0:21,0:21:63.21:0,63,944	1/1:0,28:28:66.21:852,66,0	0/0:18,0:18:54.18:0,54,808	0/0:28,0:28:84.24:0,84,1199	0/0:24,0:24:66.22:0,66,978	0/0:58,0:58:99:0,175,2582	0/0:14,0:14:39.13:0,39,584	0/0:20,0:20:60.20:0,60,899	0/0:40,0:40:99:0,117,1734	0/0:27,0:27:75.19:0,75,1095	0/0:26,0:26:78.24:0,78,1114	0/0:19,0:19:57.19:0,57,854	0/0:15,0:15:45.10:0,45,630
chr10	4546189	.	GGA	G	1971.26	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.812;DP=667;FS=2.564;HRun=0;HaplotypeScore=84.6340;InbreedingCoeff=0.9929;MQ=85.11;MQ0=0;MQRankSum=-4.142;QD=31.79;ReadPosRankSum=-1.765;VQSLOD=4.9554;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,132,2330	0/0:8,0:8:21.07:0,21,385	0/0:19,0:19:54.19:0,54,988	0/0:27,0:27:68.34:0,68,1185	0/0:23,0:23:63.20:0,63,1105	0/0:21,0:21:57.20:0,57,1045	0/0:29,0:29:78.27:0,78,1424	1/1:11,21:32:78.23:1065,78,0	0/0:29,0:29:84.26:0,84,1461	0/0:14,0:14:33.11:0,33,597	0/0:12,0:12:18.06:0,18,330	0/0:32,0:32:96.32:0,96,1722	0/0:13,0:13:36.12:0,36,654	0/0:14,0:14:42.14:0,42,770	0/0:23,0:23:69.24:0,69,1243	0/0:28,0:28:78.27:0,78,1404	1/1:6,24:30:75.20:1028,75,0	0/0:25,0:25:75.24:0,75,1310	0/0:21,0:21:54.18:0,54,959	0/0:13,0:13:39.10:0,39,640	0/0:68,0:68:99:0,202,3663	0/0:11,0:11:30.09:0,30,520	0/0:16,0:16:39.11:0,39,682	0/0:45,0:45:99:0,132,2356	0/0:10,0:10:30.10:0,30,549	0/0:20,0:20:60.19:0,60,1029	0/0:25,0:24:69.24:0,69,1253	0/0:12,0:12:36.12:0,36,642
chr10	4546567	.	T	TCTCC	839.18	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=4.165;DP=389;FS=17.304;HRun=0;HaplotypeScore=93.3570;InbreedingCoeff=0.9336;MQ=60.61;MQ0=4;MQRankSum=-2.565;QD=31.08;ReadPosRankSum=-1.951;VQSLOD=2.0819;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:50.21:0,50,875	0/0:7,0:7:12.04:0,12,214	0/0:24,0:18:45.07:0,45,703	0/0:27,0:27:55.37:0,55,909	0/0:11,0:11:24.06:0,24,398	0/0:11,0:11:28.91:0,29,481	0/0:18,0:18:45.15:0,45,794	1/1:7,6:15:23.58:456,24,0	0/0:14,0:14:33.11:0,33,582	0/0:9,0:9:18.06:0,18,315	0/0:11,0:11:18.06:0,18,319	0/0:12,0:12:27.56:0,28,475	0/0:10,0:10:30.10:0,30,517	0/0:12,0:12:27.09:0,27,480	0/0:7,0:7:18.06:0,18,319	0/0:12,0:12:27.08:0,27,452	1/1:3,9:11:23.99:503,24,0	0/0:16,0:16:39.13:0,39,667	0/0:14,0:12:15.05:0,15,247	0/0:11,0:11:27.09:0,27,469	0/0:22,0:22:42.01:0,42,730	0/0:15,0:15:24.08:0,24,418	0/0:14,0:14:30.10:0,30,533	0/0:21,0:21:36.12:0,36,627	0/0:4,0:4:12.04:0,12,206	0/0:17,0:17:39.13:0,39,689	0/0:7,0:7:21.07:0,21,373	0/0:10,0:10:15.04:0,15,238
chr10	4548144	.	T	TTCC	1175.49	PASS	AB=0.937;AC=22;AF=0.393;AN=56;BaseQRankSum=9.346;DP=300;FS=34.022;HRun=0;HaplotypeScore=109.2582;InbreedingCoeff=-0.5027;MQ=35.94;MQ0=13;MQRankSum=-4.305;QD=4.76;ReadPosRankSum=-0.210;VQSLOD=0.5592;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:13,1:13:59.38:59,0,235	0/0:1,0:1:3.01:0,3,45	0/0:7,0:1:3.01:0,3,45	0/0:8,0:0:3.01:0,3,34	0/0:13,0:13:22.39:0,22,279	0/1:8,1:8:89.54:90,0,188	0/1:11,3:14:68.05:68,0,369	0/1:5,0:5:10.69:11,0,52	0/1:10,0:9:9.42:9,0,185	0/1:17,0:15:44.59:45,0,365	0/1:6,0:6:17.87:18,0,101	0/1:18,5:23:99:243,0,394	0/1:20,0:20:99:127,0,348	0/1:12,0:12:99:119,0,106	0/1:6,0:5:26.20:26,0,73	0/1:12,0:11:76.41:76,0,231	0/1:12,0:12:6.30:82,0,6	0/0:5,0:4:6.44:0,6,64	0/1:12,0:11:31.05:31,0,242	0/1:17,0:17:1.86:2,0,383	0/1:20,0:19:4.91:5,0,490	0/1:15,0:12:70.10:70,0,303	0/0:13,0:12:7.34:0,7,243	0/0:6,0:6:9.03:0,9,129	0/1:2,1:3:35.48:73,0,35	0/1:13,2:15:84.93:85,0,362	0/1:1,1:2:1.34:57,0,1	1/1:2,0:1:3:28,3,0
chr10	4548723	.	T	TAA	1067.10	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=0.050;DP=696;FS=0.639;HRun=9;HaplotypeScore=84.6874;InbreedingCoeff=0.9850;MQ=65.28;MQ0=1;MQRankSum=0.363;QD=19.76;ReadPosRankSum=-5.188;VQSLOD=1.4845;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:77.42:0,77,809	0/0:10,0:10:27.07:0,27,287	0/0:22,0:14:18.75:0,19,289	0/0:25,0:22:53.65:0,54,528	0/0:37,0:37:96.18:0,96,1014	0/0:15,0:14:39.07:0,39,400	0/0:23,0:23:57.11:0,57,607	1/1:11,22:35:69.40:941,69,0	0/0:25,0:25:44.83:0,45,670	0/0:32,0:32:84.19:0,84,893	0/0:26,0:26:60.13:0,60,639	0/0:23,0:23:38.79:0,39,598	0/0:19,0:19:45.09:0,45,479	0/0:25,0:25:63.13:0,63,670	0/0:22,0:22:60.15:0,60,639	0/0:29,0:29:75.16:0,75,790	1/1:2,0:19:13.81:244,14,0	0/0:18,0:18:45.10:0,45,479	0/0:22,0:22:44.90:0,45,460	0/0:29,0:29:75.12:0,75,775	0/0:16,0:16:45.11:0,45,478	0/0:27,0:27:70.69:0,71,730	0/0:33,0:33:90.17:0,90,956	0/0:26,0:26:75.16:0,75,788	0/0:20,0:20:54.11:0,54,566	0/0:39,0:40:99:0,111,1160	0/0:30,0:30:81.16:0,81,845	0/0:15,0:15:45.11:0,45,478
chr10	4549364	.	TACACACACACAC	T	321.75	PASS	AB=0.862;AC=5;AF=0.089;AN=56;BaseQRankSum=2.473;DP=527;FS=4.144;HRun=0;HaplotypeScore=169.5837;InbreedingCoeff=0.0791;MQ=58.71;MQ0=8;MQRankSum=-2.520;QD=3.32;ReadPosRankSum=-2.392;VQSLOD=2.0959;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:33,21:54:99:363,0,139	0/0:10,0:10:24.08:0,24,1006	0/0:24,0:18:4.56:0,5,39	0/0:23,0:20:9.03:0,9,127	0/0:16,0:15:18.04:0,18,735	0/0:12,0:13:9.03:0,9,290	0/0:18,0:18:17.09:0,17,645	0/1:24,0:22:2.97:3,0,130	0/0:14,0:15:21.05:0,21,849	0/0:29,0:29:42.13:0,42,1127	0/0:10,0:10:18.06:0,18,339	0/0:17,0:18:15.03:0,15,450	0/0:19,0:20:24.08:0,24,756	0/0:12,0:14:12.04:0,12,439	0/0:16,0:20:25.15:0,25,490	0/0:20,0:20:36.11:0,36,1493	0/0:26,0:26:5.88:0,6,664	0/1:11,0:13:46.34:46,0,590	0/0:13,0:13:21.07:0,21,820	0/0:15,0:15:20.40:0,20,897	0/0:38,0:37:39.12:0,39,1043	0/0:11,0:12:27.09:0,27,655	0/0:11,0:10:12.04:0,12,446	0/0:24,0:27:39.59:0,40,1502	1/1:5,0:6:0.47:1,0,0	0/0:13,0:16:21.07:0,21,462	0/0:13,0:15:30.10:0,30,706	0/0:5,0:7:18.06:0,18,408
chr10	4549396	.	C	CGG	734.85	PASS	AB=0.883;AC=5;AF=0.089;AN=56;BaseQRankSum=6.448;DP=680;FS=1.521;HRun=0;HaplotypeScore=103.0084;InbreedingCoeff=-0.1008;MQ=51.09;MQ0=23;MQRankSum=-4.014;QD=6.87;ReadPosRankSum=-1.518;VQSLOD=3.0094;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:63,0:62:99:0,108,1493	0/0:13,0:13:36.12:0,36,562	0/0:19,0:4:9.03:0,9,124	0/0:35,0:10:16.76:0,17,313	0/0:18,0:16:39.13:0,39,603	0/0:16,0:16:25.90:0,26,371	0/0:20,0:20:42.11:0,42,606	0/1:22,0:21:99:351,0,120	0/0:22,0:22:54.17:0,54,813	0/0:29,0:29:81.23:0,81,1186	0/0:19,0:19:48.62:0,49,712	0/0:31,0:31:60.67:0,61,901	0/0:22,0:22:52.89:0,53,741	0/0:14,0:14:30.06:0,30,385	0/1:18,1:19:23.16:23,0,281	0/0:26,0:26:63.21:0,63,985	0/1:4,25:29:41.17:376,0,41	0/1:23,0:22:61.15:61,0,380	0/0:18,0:17:47.15:0,47,620	0/0:16,0:16:33.11:0,33,514	0/0:50,0:49:96.31:0,96,1412	0/0:26,0:26:57.16:0,57,828	0/0:20,0:19:42.14:0,42,635	0/0:30,0:30:69.20:0,69,981	0/1:12,1:12:36.62:40,0,37	0/0:23,0:23:69.20:0,69,958	0/0:26,0:25:60.08:0,60,752	0/0:17,0:16:48.13:0,48,673
chr10	4549400	.	C	CGG	81.52	PASS	AB=0.979;AC=4;AF=0.071;AN=56;BaseQRankSum=6.287;DP=683;FS=9.790;HRun=0;HaplotypeScore=111.7637;InbreedingCoeff=0.3288;MQ=51.39;MQ0=23;MQRankSum=-3.340;QD=1.27;ReadPosRankSum=0.253;VQSLOD=1.4111;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:51:83.67:0,84,1040	0/0:14,0:14:39.13:0,39,605	0/0:25,0:8:21.07:0,21,299	0/0:36,0:11:33:0,33,459	0/0:18,0:16:39.12:0,39,584	0/0:17,0:17:33.15:0,33,445	0/0:19,0:19:44.98:0,45,665	0/0:20,0:19:33.95:0,34,324	0/0:23,0:23:57.17:0,57,828	0/0:29,0:29:84.20:0,84,1191	0/0:19,0:19:48.63:0,49,711	0/0:31,0:31:63.66:0,64,932	0/0:22,0:22:53.44:0,53,719	0/0:14,0:14:33.09:0,33,451	0/0:18,3:21:2.80:0,3,246	0/0:27,0:27:66.19:0,66,988	0/1:29,0:28:50.43:50,0,150	0/1:22,1:22:99:110,0,329	0/0:17,0:16:48.13:0,48,666	0/0:16,0:16:33.11:0,33,514	0/0:53,0:52:99:0,105,1507	0/0:27,0:27:60.17:0,60,862	0/0:19,0:18:42.14:0,42,614	0/0:30,0:30:66.17:0,66,918	1/1:12,0:11:5.60:25,6,0	0/0:25,0:25:75.22:0,75,1051	0/0:26,0:25:60.16:0,60,794	0/0:19,0:18:54.15:0,54,765
chr10	4549404	.	C	CGG	799.74	PASS	AB=0.819;AC=2;AF=0.036;AN=56;BaseQRankSum=2.799;DP=697;FS=8.028;HRun=0;HaplotypeScore=107.9750;InbreedingCoeff=-0.0420;MQ=52.27;MQ0=20;MQRankSum=-1.173;QD=14.81;ReadPosRankSum=-0.591;VQSLOD=2.9255;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:49:77.92:0,78,1068	0/0:16,0:16:42.14:0,42,641	0/0:26,0:11:12.06:0,12,278	0/0:38,0:10:26.76:0,27,380	0/0:17,0:15:39.13:0,39,606	0/0:15,0:15:28.91:0,29,416	0/0:19,0:19:42.14:0,42,646	0/1:10,12:22:38.20:416,0,38	0/0:23,0:23:57.16:0,57,822	0/0:26,0:26:78.11:0,78,1090	0/0:18,0:18:45.62:0,46,682	0/0:31,0:31:63.58:0,64,892	0/0:23,0:23:52.62:0,53,719	0/0:16,0:16:36.01:0,36,464	0/0:21,0:21:26.98:0,27,292	0/0:27,0:27:72.17:0,72,1027	0/1:31,0:30:73.96:472,0,74	0/0:21,0:21:33.82:0,34,432	0/0:20,0:19:53.94:0,54,714	0/0:18,0:18:39.13:0,39,597	0/0:55,0:54:99:0,105,1549	0/0:31,0:31:66.11:0,66,939	0/0:20,0:19:45.13:0,45,655	0/0:32,0:32:75.17:0,75,1012	0/0:12,0:11:5.94:0,6,41	0/0:25,0:25:75:0,75,985	0/0:24,0:23:57.15:0,57,750	0/0:19,0:18:54.13:0,54,740
chr10	4549407	.	A	ATG	320.74	PASS	AB=0.919;AC=4;AF=0.071;AN=56;BaseQRankSum=5.629;DP=711;FS=10.471;HRun=0;HaplotypeScore=115.3003;InbreedingCoeff=0.3785;MQ=52.47;MQ0=19;MQRankSum=-5.821;QD=5.44;ReadPosRankSum=0.791;VQSLOD=2.2534;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:49:73.71:0,74,1013	0/0:16,0:16:42.13:0,42,626	0/0:29,0:14:30.10:0,30,471	0/0:36,0:10:29.59:0,30,430	0/0:17,0:15:39.09:0,39,603	0/0:16,0:16:34.91:0,35,485	0/0:19,0:19:39.13:0,39,602	0/0:23,0:22:66.03:0,66,795	0/0:23,0:23:60.19:0,60,885	0/0:26,0:26:76.75:0,77,1064	0/0:17,0:17:42.11:0,42,589	0/0:31,0:31:66.90:0,67,979	0/0:22,0:22:52.95:0,53,716	0/0:18,0:18:42.11:0,42,583	0/1:19,3:22:52.35:52,0,120	0/0:26,0:26:68.81:0,69,1068	0/0:34,0:33:44.45:0,44,517	0/1:22,1:23:99:303,0,219	0/0:23,0:22:63.01:0,63,826	0/0:16,0:16:38.69:0,39,603	0/0:56,0:55:99:0,105,1550	0/0:31,0:31:65.84:0,66,926	0/0:20,0:19:45.14:0,45,683	0/0:33,0:33:75.22:0,75,1070	1/1:14,0:13:6.02:71,6,0	0/0:25,0:25:72.21:0,72,1014	0/0:24,0:23:60.11:0,60,741	0/0:21,0:20:57.15:0,57,775
chr10	4551032	.	CGCAT	C	1426.83	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.545;DP=725;FS=7.478;HRun=0;HaplotypeScore=116.0049;InbreedingCoeff=0.9914;MQ=75.56;MQ0=1;MQRankSum=-1.994;QD=38.56;ReadPosRankSum=3.231;VQSLOD=3.8111;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,34:36:84.07:1522,84,0	0/0:6,0:6:18.06:0,18,471	0/0:14,0:14:35.89:0,36,759	0/0:14,0:14:32.94:0,33,521	0/0:23,0:23:60.19:0,60,1508	0/0:21,0:21:63.22:0,63,1649	0/0:32,0:32:90.27:0,90,2147	0/0:29,0:29:63.19:0,63,1497	0/0:19,0:19:54.19:0,54,1413	0/0:28,0:28:81:0,81,1932	0/0:17,0:17:42.14:0,42,1082	0/0:27,0:27:72.23:0,72,1810	0/0:31,0:31:90.31:0,90,2342	0/0:30,0:30:90.29:0,90,2207	0/0:21,0:21:60.21:0,60,1528	0/0:20,0:20:57.18:0,57,1439	0/0:31,0:31:81.26:0,81,2009	0/0:28,0:28:78.23:0,78,1870	0/0:25,0:25:66.21:0,66,1594	0/0:23,0:23:63.18:0,63,1478	0/0:81,0:81:99:0,223,5558	0/0:13,0:13:36.12:0,36,936	0/0:13,0:13:36.10:0,36,835	0/0:43,0:43:99:0,120,2848	0/0:33,0:33:93.28:0,93,2254	0/0:30,0:30:75.25:0,75,1910	0/0:20,0:20:54.19:0,54,1413	0/0:16,0:16:48.16:0,48,1154
chr10	4551142	.	AG	A	4413.67	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=12.545;DP=650;FS=2.179;HRun=2;HaplotypeScore=70.5644;InbreedingCoeff=0.9969;MQ=83.68;MQ0=0;MQRankSum=-2.042;QD=35.88;ReadPosRankSum=0.173;VQSLOD=5.2639;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:1,47:48:99:1675,129,0	0/0:13,0:13:36.09:0,36,517	0/0:16,0:16:48.16:0,48,709	0/0:22,0:22:60.18:0,60,853	0/0:15,0:15:42.13:0,42,609	0/0:19,0:19:57.19:0,57,854	0/0:33,0:33:99:0,99,1456	1/1:1,35:36:99:1298,102,0	0/0:29,0:29:87.29:0,87,1300	0/0:21,0:21:63.19:0,63,880	0/0:18,0:18:54.17:0,54,789	0/0:28,0:28:84.28:0,84,1258	0/0:20,0:20:60.20:0,60,897	0/0:21,0:21:60.20:0,60,897	0/0:17,0:17:51.17:0,51,765	0/0:16,0:16:48.13:0,48,695	1/1:0,39:39:99:1441,111,0	0/0:34,0:34:99:0,102,1523	0/0:17,0:17:48.15:0,48,701	0/0:20,0:20:57.18:0,57,831	0/0:42,0:42:99:0,126,1882	0/0:19,0:19:54.17:0,54,788	0/0:7,0:7:18.03:0,18,230	0/0:25,0:25:72.24:0,72,1079	0/0:13,0:13:39.13:0,39,585	0/0:29,0:29:84.26:0,84,1221	0/0:22,0:22:66.21:0,66,957	0/0:11,0:11:33.11:0,33,495
chr10	4552434	.	GTA	G	1085.18	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.502;DP=717;FS=3.640;HRun=0;HaplotypeScore=99.7799;InbreedingCoeff=0.9949;MQ=83.60;MQ0=0;MQRankSum=-4.354;QD=30.14;ReadPosRankSum=2.489;VQSLOD=5.6819;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,36:36:81.02:1180,81,0	0/0:7,0:7:21.07:0,21,426	0/0:21,0:21:63.14:0,63,1165	0/0:23,0:23:60.15:0,60,1106	0/0:21,0:21:60.19:0,60,1170	0/0:23,0:23:69.22:0,69,1352	0/0:25,0:25:72.23:0,72,1398	0/0:26,0:26:78.27:0,78,1551	0/0:30,0:30:90.30:0,90,1792	0/0:20,0:20:60.21:0,60,1216	0/0:15,0:15:42.14:0,42,843	0/0:34,0:34:99:0,102,2071	0/0:27,0:27:81.28:0,81,1619	0/0:33,0:33:99:0,99,1989	0/0:32,0:32:96.32:0,96,1869	0/0:26,0:26:78.25:0,78,1538	0/0:31,0:31:93.32:0,93,1889	0/0:28,0:28:84.29:0,84,1695	0/0:20,0:20:57.18:0,57,1095	0/0:9,0:9:27.09:0,27,534	0/0:51,0:51:99:0,153,2986	0/0:28,0:28:81.28:0,81,1633	0/0:16,0:16:45.15:0,45,893	0/0:31,0:31:93.26:0,93,1812	0/0:17,0:17:51.17:0,51,1022	0/0:37,0:37:99:0,111,2247	0/0:35,0:35:99:0,105,2094	0/0:15,0:15:42.14:0,42,852
chr10	4553125	.	AAGAACCTGAGGC	A	4916.04	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=11.043;DP=660;FS=8.764;HRun=0;HaplotypeScore=218.4717;InbreedingCoeff=0.9941;MQ=73.96;MQ0=0;MQRankSum=-10.576;QD=63.03;ReadPosRankSum=0.877;VQSLOD=3.3804;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,34:38:63.13:2081,63,0	0/0:5,0:5:15.05:0,15,840	0/0:26,0:26:72.25:0,72,3785	0/0:23,0:22:66.23:0,66,3379	0/0:17,0:17:44.90:0,45,2368	0/0:27,0:27:81.28:0,81,4719	0/0:26,0:26:72.23:0,72,3887	1/1:3,14:17:42.14:1436,42,0	0/0:32,0:32:93.32:0,93,5066	0/0:27,0:27:81.27:0,81,4080	0/0:10,0:10:30.10:0,30,1465	0/0:30,0:30:90.31:0,90,5094	0/0:31,0:31:93.32:0,93,5363	0/0:27,0:27:78.27:0,78,4613	0/0:30,0:30:90.31:0,90,5406	0/0:22,0:22:66.23:0,66,3691	1/1:2,21:23:39.13:1399,39,0	0/0:21,0:21:63.22:0,63,3621	0/0:27,0:27:81.28:0,81,4224	0/0:19,0:19:51.14:0,51,2276	0/0:40,0:40:99:0,114,6386	0/0:25,0:25:75.24:0,75,4108	0/0:13,0:13:39.13:0,39,1861	0/0:32,0:32:96.25:0,96,4624	0/0:14,0:14:39.13:0,39,2068	0/0:23,0:23:66.23:0,66,3580	0/0:20,0:20:60.21:0,60,3266	0/0:15,0:15:45.15:0,45,2519
chr10	4553239	.	A	AC	632.06	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.467;DP=517;FS=5.191;HRun=0;HaplotypeScore=64.4339;InbreedingCoeff=0.8049;MQ=95.64;MQ0=0;MQRankSum=-3.251;QD=21.80;ReadPosRankSum=-0.215;VQSLOD=4.9746;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,22:29:60.13:727,60,0	0/0:6,0:6:18.06:0,18,251	0/0:28,0:28:72.07:0,72,989	0/0:21,0:23:52:0,52,639	0/0:12,0:12:33.11:0,33,450	0/0:18,0:18:54.18:0,54,754	0/0:23,0:23:69.19:0,69,915	0/0:15,0:15:2.48:0,2,118	0/0:21,0:21:57.16:0,57,763	0/0:19,0:19:54.18:0,54,755	0/0:7,0:7:18.06:0,18,248	0/0:22,0:22:66.22:0,66,922	0/0:24,0:24:72.22:0,72,975	0/0:30,0:30:90.30:0,90,1252	0/0:19,0:19:53.59:0,54,297	0/0:26,0:26:78.26:0,78,1088	0/0:28,0:28:68.21:0,68,426	0/0:23,0:23:16.16:0,16,271	0/0:13,0:13:39.09:0,39,522	0/0:11,0:11:33.10:0,33,443	0/0:27,0:27:81.27:0,81,1130	0/0:12,0:12:33.11:0,33,458	0/0:7,0:7:21.07:0,21,293	0/0:31,0:31:92.78:0,93,1212	0/0:9,0:9:26.24:0,26,154	0/0:18,0:18:54.18:0,54,749	0/0:10,0:10:30.10:0,30,419	0/0:6,0:6:15.05:0,15,205
chr10	4553511	.	TG	T	1462.98	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.019;DP=625;FS=1.286;HRun=2;HaplotypeScore=63.2923;InbreedingCoeff=0.9875;MQ=80.40;MQ0=0;MQRankSum=0.026;QD=34.83;ReadPosRankSum=-2.014;VQSLOD=3.1307;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:84.28:0,84,1256	0/0:8,0:8:24.08:0,24,360	0/0:15,0:15:42.14:0,42,629	0/0:16,0:16:30.04:0,30,404	0/0:20,0:20:54.17:0,54,789	0/0:24,0:24:72.24:0,72,1079	0/0:31,0:31:93.32:0,93,1394	1/1:2,40:42:99:1558,120,0	0/0:27,0:27:81.27:0,81,1213	0/0:21,0:21:63.20:0,63,926	0/0:6,0:6:18.06:0,18,268	0/0:27,0:27:78.26:0,78,1163	0/0:22,0:22:66.22:0,66,986	0/0:26,0:26:78.25:0,78,1148	0/0:29,0:29:84.28:0,84,1257	0/0:16,0:16:45.14:0,45,646	0/0:36,0:36:99:0,108,1619	0/0:22,0:22:66.22:0,66,987	0/0:21,0:21:60.19:0,60,877	0/0:17,0:17:48.15:0,48,700	0/0:30,0:30:81.25:0,81,1172	0/0:24,0:24:66.22:0,66,981	0/0:8,0:8:24.08:0,24,357	0/0:30,0:30:90.29:0,90,1325	0/0:17,0:17:51.16:0,51,745	0/0:26,0:26:78.22:0,78,1088	0/0:14,0:14:42.06:0,42,583	0/0:22,0:22:66.21:0,66,968
chr10	4554740	.	C	CGTAG	8280.22	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=14.397;DP=697;FS=0.790;HRun=0;HaplotypeScore=128.1812;InbreedingCoeff=0.9990;MQ=87.25;MQ0=0;MQRankSum=-15.290;QD=60.88;ReadPosRankSum=-0.367;VQSLOD=6.0281;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,37:38:87.30:2281,87,0	0/0:15,0:15:45.11:0,45,864	0/0:27,0:27:55.19:0,55,1472	0/0:25,0:25:75.21:0,75,1438	0/0:16,0:16:48.15:0,48,967	0/0:24,0:24:72.23:0,72,1470	0/0:32,0:32:96.29:0,96,1919	1/1:2,16:19:54.17:1232,54,0	0/0:18,0:18:54.17:0,54,1052	0/0:27,0:27:75.25:0,75,1538	0/0:15,0:15:45.15:0,45,942	0/0:39,0:39:99:0,114,2258	0/0:12,0:12:36.07:0,36,673	0/0:26,0:26:78.21:0,78,1491	1/1:2,21:25:60.21:1558,60,0	0/0:27,0:27:81.22:0,81,1545	1/1:0,29:30:69.24:1812,69,0	1/1:0,12:12:30.10:759,30,0	0/0:24,0:23:72.22:0,72,1390	0/0:24,0:24:72.25:0,72,1495	0/0:46,0:46:99:0,135,2811	0/0:17,0:17:51.14:0,51,975	0/0:21,0:21:57.14:0,57,1062	0/0:57,0:57:99:0,172,3449	1/1:0,10:12:24.08:638,24,0	0/0:41,0:41:99:0,120,2398	0/0:20,0:20:54.15:0,54,1011	0/0:8,0:8:24.08:0,24,503
chr10	4554965	.	TCACACACACACACACACACACA	T	677.76	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=1.262;DP=436;FS=5.207;HRun=0;HaplotypeScore=209.6550;InbreedingCoeff=0.4531;MQ=65.82;MQ0=13;MQRankSum=-1.435;QD=7.45;ReadPosRankSum=-1.090;VQSLOD=2.4067;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:32,13:43:12.04:695,12,0	0/0:5,0:4:3.01:0,3,301	0/0:30,0:15:3.01:0,3,127	0/0:38,0:22:7.84:0,8,168	0/0:11,0:13:15.05:0,15,935	0/0:11,0:13:24.08:0,24,1631	0/0:17,0:16:27.06:0,27,1513	1/1:22,0:22:3.28:67,3,0	0/0:12,0:12:27.06:0,27,1309	0/0:10,0:9:15.05:0,15,1005	0/0:5,0:5:6.02:0,6,494	0/0:13,0:13:15.05:0,15,1483	0/0:12,0:12:24.08:0,24,2113	0/0:10,0:10:18.06:0,18,1403	0/0:8,0:13:24.05:0,24,1507	0/0:13,0:13:30.10:0,30,2677	0/1:24,0:24:27.60:28,0,332	0/0:10,0:10:21.07:0,21,1410	0/0:15,0:15:18.06:0,18,827	0/0:12,0:12:15.05:0,15,849	0/0:30,0:30:54.17:0,54,3439	0/0:7,0:8:15.04:0,15,832	0/0:12,0:12:6.91:0,7,590	0/0:27,0:26:48.16:0,48,3992	0/0:6,0:8:9.03:0,9,671	0/0:5,0:5:12.04:0,12,772	0/0:6,0:8:17.89:0,18,1189	0/0:4,0:4:9.03:0,9,892
chr10	4556232	.	CA	C	2420.37	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=7.228;DP=703;FS=5.825;HRun=9;HaplotypeScore=76.0957;InbreedingCoeff=0.9981;MQ=69.54;MQ0=3;MQRankSum=-0.058;QD=20.51;ReadPosRankSum=4.068;VQSLOD=4.4368;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,38:41:99:934,102,0	0/0:19,0:19:48.14:0,48,554	0/0:29,1:18:19.57:0,20,364	0/0:41,0:28:62.83:0,63,570	0/0:26,0:26:63.18:0,63,719	0/0:21,0:21:60.16:0,60,682	0/0:25,0:25:72.20:0,72,821	0/0:35,0:35:96.29:0,96,1108	0/0:18,0:18:51.15:0,51,588	0/0:26,0:26:66.20:0,66,762	0/0:21,0:21:55.32:0,55,596	0/0:18,0:18:48.13:0,48,545	0/0:21,0:21:54.16:0,54,617	0/0:14,0:14:33.09:0,33,372	1/1:4,18:22:47.97:439,48,0	0/0:18,0:19:56.99:0,57,629	0/0:8,0:42:96.92:0,97,530	1/1:3,34:37:96.05:879,96,0	0/0:17,0:17:42.12:0,42,477	0/0:30,0:29:72.21:0,72,822	0/0:14,0:14:30.09:0,30,346	0/0:27,1:28:75.68:0,76,853	0/0:29,0:29:75.21:0,75,849	0/0:18,0:18:51.15:0,51,588	1/1:2,16:18:36.02:329,36,0	0/0:34,0:34:84.24:0,84,960	0/0:21,0:21:54.16:0,54,623	0/0:17,0:17:48.14:0,48,553
chr10	4556529	.	CCTCTCTCT	C	557.68	PASS	AB=1.000;AC=7;AF=0.140;AN=50;BaseQRankSum=0.908;DP=544;FS=9.459;HRun=0;HaplotypeScore=118.3381;InbreedingCoeff=0.5659;MQ=71.82;MQ0=29;MQRankSum=-0.516;QD=5.93;ReadPosRankSum=1.491;VQSLOD=1.6664;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:12.51:0,13,388	./.	./.	0/1:47,0:27:0:0,0,0	0/0:13,0:12:6:0,6,61	0/0:23,0:23:18.05:0,18,367	0/0:27,0:27:18.06:0,18,359	0/0:20,0:18:0.47:0,0,1	0/0:14,0:14:12.38:0,12,200	0/0:23,0:22:32.28:0,32,682	./.	0/0:13,0:12:8.94:0,9,153	0/0:9,0:9:9.03:0,9,222	0/0:18,0:18:13.07:0,13,249	0/0:28,0:26:12.04:0,12,382	1/1:11,0:11:11.51:143,12,0	0/0:16,0:13:3.90:0,4,54	0/0:16,0:15:10.39:0,10,253	0/0:22,0:22:21.07:0,21,570	0/0:12,0:11:3.01:0,3,100	0/0:25,0:21:16.05:0,16,525	0/0:8,0:8:3.01:0,3,74	0/0:11,0:11:2.99:0,3,24	0/0:28,0:26:21:0,21,449	0/0:19,0:19:3.01:0,3,74	1/1:22,0:24:18.06:405,18,0	1/1:7,5:10:5.99:131,6,0	0/0:19,0:17:1.25:0,1,3
chr10	4556578	.	CTGTGTGTGTGTGTGTGTGTGTGTG	C	110.44	PASS	AC=2;AF=0.042;AN=48;BaseQRankSum=1.866;DP=485;FS=0.000;HRun=0;HaplotypeScore=206.7169;InbreedingCoeff=0.5136;MQ=39.51;MQ0=49;MQRankSum=-3.391;QD=13.81;ReadPosRankSum=-2.571;VQSLOD=2.0170;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:27:35.04:0,35,2009	0/0:7,0:6:9.03:0,9,855	./.	./.	0/0:23,0:20:21.07:0,21,1748	0/0:22,0:19:21.54:0,22,1441	0/0:29,0:28:13.16:0,13,1227	0/0:27,0:26:52.15:0,52,1680	0/0:14,0:14:18.06:0,18,1245	0/0:22,0:19:32.32:0,32,1880	0/0:10,0:10:6.02:0,6,571	0/0:23,0:22:23.09:0,23,1961	0/0:16,0:16:15.03:0,15,960	0/0:18,0:17:14.41:0,14,854	./.	0/0:10,0:10:12.04:0,12,752	0/0:14,0:13:14.74:0,15,206	1/1:7,0:7:3.01:187,3,0	0/0:16,0:15:39.13:0,39,2709	0/0:15,0:12:12.04:0,12,975	0/0:32,0:25:24.83:0,25,2292	0/0:13,0:12:12.04:0,12,1091	0/0:15,0:15:12.04:0,12,1091	0/0:26,0:23:21.07:0,21,1697	./.	0/0:24,0:21:47.53:0,48,3458	0/0:19,0:15:12.30:0,12,556	0/0:18,0:11:18.06:0,18,1710
chr10	4560863	.	G	GCACA	1170.65	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.098;DP=1011;FS=3.173;HRun=0;HaplotypeScore=193.1816;InbreedingCoeff=0.9630;MQ=56.77;MQ0=18;MQRankSum=-0.731;QD=22.51;ReadPosRankSum=-1.235;VQSLOD=3.0766;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:29,20:52:66.69:1266,67,0	0/0:15,0:16:35.85:0,36,542	0/0:44,0:8:11.44:0,11,138	0/0:49,0:22:22.79:0,23,257	0/0:27,0:27:44.64:0,45,935	0/0:24,0:24:59.68:0,60,860	0/0:36,0:37:66.50:0,66,1099	0/0:24,0:23:36.74:0,37,496	0/0:28,0:29:66.19:0,66,1024	0/0:44,0:44:96.25:0,96,1574	0/0:26,0:26:69.22:0,69,1113	0/0:55,0:55:99:0,126,2213	0/0:29,0:31:77.83:0,78,1114	0/0:34,0:35:87.21:0,87,1292	0/0:31,0:31:75.20:0,75,1187	0/0:26,0:27:66.39:0,66,941	0/0:46,0:46:88.33:0,88,1666	0/0:34,0:34:73.61:0,74,1155	0/0:19,0:16:30.10:0,30,460	0/0:31,0:31:69.19:0,69,1116	0/0:122,0:123:99:0,282,4341	0/0:18,0:18:45.13:0,45,715	0/0:23,0:23:57.13:0,57,885	0/0:54,0:55:99:0,151,2304	0/0:28,0:28:81.26:0,81,1329	0/0:47,0:47:94.93:0,95,1278	0/0:17,0:17:45.11:0,45,652	0/0:15,0:15:36.12:0,36,576
chr10	4560959	.	GCACATGCCCA	G	1047.24	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=3.885;DP=1084;FS=0.000;HRun=0;HaplotypeScore=302.5607;InbreedingCoeff=0.9208;MQ=57.22;MQ0=6;MQRankSum=-4.077;QD=20.94;ReadPosRankSum=-3.733;VQSLOD=1.5324;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:18,8:26:12.23:127,12,0	0/0:15,0:15:45.14:0,45,1606	0/0:29,0:3:5.84:0,6,69	0/0:38,0:9:20.10:0,20,439	0/0:17,0:17:42.14:0,42,1897	0/0:24,0:24:63.22:0,63,2810	0/0:55,0:55:99:0,142,5029	1/1:14,10:20:51.16:1037,51,0	0/0:42,0:42:99:0,113,5159	0/0:48,0:48:99:0,129,5043	0/0:9,0:9:24.08:0,24,1082	0/0:57,0:57:99:0,159,6915	0/0:43,0:43:99:0,123,4967	0/0:56,0:56:99:0,150,6192	0/0:33,0:33:93.32:0,93,4201	0/0:42,0:42:99:0,117,5239	0/0:44,0:44:84.48:0,84,4893	0/0:37,0:37:51.84:0,52,4071	0/0:18,0:18:54.17:0,54,1918	0/0:30,0:30:84.27:0,84,3355	0/0:238,0:238:99:0,655,28087	0/0:21,0:21:60.19:0,60,2515	0/0:15,0:15:39.13:0,39,1838	0/0:37,0:37:92.33:0,92,4022	0/0:19,0:19:57.20:0,57,2656	0/0:39,0:39:99:0,117,4933	0/0:19,0:19:54.07:0,54,2299	0/0:5,0:5:15.05:0,15,777
chr10	4560963	.	ATG	A	96.28	PASS	AB=0.960;AC=4;AF=0.071;AN=56;BaseQRankSum=6.939;DP=1070;FS=3.232;HRun=0;HaplotypeScore=138.2011;InbreedingCoeff=0.6237;MQ=56.58;MQ0=7;MQRankSum=-2.614;QD=1.23;ReadPosRankSum=-3.048;VQSLOD=1.9571;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:21,1:23:0.63:34,0,1	0/0:15,0:15:45.14:0,45,875	0/1:33,0:3:3.49:3,0,62	0/0:36,1:11:7.05:0,7,349	0/0:16,0:16:45.14:0,45,877	0/0:23,0:23:63.22:0,63,1266	0/0:54,0:54:99:0,144,2870	1/1:22,0:18:11.03:160,11,0	0/0:43,0:43:99:0,120,2409	0/0:48,0:48:99:0,141,2764	0/0:10,0:10:27.09:0,27,537	0/0:58,0:58:99:0,175,3407	0/0:41,0:41:99:0,123,2444	0/0:54,0:54:99:0,157,3135	0/0:34,0:34:99:0,99,1978	0/0:42,0:42:99:0,123,2467	0/0:40,1:41:99:0,106,2254	0/0:35,0:36:59.37:0,59,1925	0/0:21,0:21:63.22:0,63,1240	0/0:29,0:29:84.27:0,84,1649	0/0:232,2:233:99:0,671,13364	0/0:20,0:20:60.19:0,60,1183	0/0:16,0:16:45.15:0,45,889	0/0:33,0:33:96.31:0,96,1882	0/0:21,0:21:63.22:0,63,1249	0/0:40,0:40:99:0,117,2365	0/0:19,0:19:54.07:0,54,1049	0/0:6,0:6:18.06:0,18,364
chr10	4560997	.	GCA	G	277.31	PASS	AB=0.923;AC=3;AF=0.054;AN=56;BaseQRankSum=6.557;DP=1129;FS=11.759;HRun=0;HaplotypeScore=149.7191;InbreedingCoeff=0.6421;MQ=54.71;MQ0=14;MQRankSum=-2.544;QD=6.93;ReadPosRankSum=-1.139;VQSLOD=2.6126;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:0.17:0,0,0	0/0:13,0:13:33.09:0,33,525	0/0:27,0:7:21.07:0,21,317	0/0:50,0:18:47.44:0,47,584	0/0:19,0:19:42.13:0,42,673	0/0:25,0:25:72.16:0,72,1161	0/0:49,0:49:99:0,111,1815	1/1:15,12:23:32.96:365,33,0	0/0:49,2:51:49.97:0,50,1827	0/0:41,0:41:99:0,99,1601	0/1:11,1:12:17.13:17,0,280	0/0:62,1:62:99:0,118,2371	0/0:39,2:40:70.12:0,70,1612	0/0:48,0:48:99:0,100,2017	0/0:39,0:39:90.29:0,90,1423	0/0:38,0:38:93.26:0,93,1450	0/0:45,0:45:99:0,107,1905	0/0:43,1:44:31.64:0,32,1555	0/0:33,0:27:74.49:0,74,1083	0/0:24,0:24:26.75:0,27,927	0/0:227,2:227:99:0,316,8183	0/0:23,0:23:51.14:0,51,793	0/0:23,0:23:60.20:0,60,980	0/0:41,0:41:90.27:0,90,1440	0/0:22,0:22:42.14:0,42,685	0/0:43,1:44:88.10:0,88,1903	0/0:25,0:25:54.15:0,54,856	0/0:16,0:16:39.13:0,39,645
chr10	4561065	.	ACACACAGGCACACACACAGGCACG	A	2819.92	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.355;DP=1020;FS=1.514;HRun=0;HaplotypeScore=570.3916;InbreedingCoeff=0.9224;MQ=56.67;MQ0=7;MQRankSum=-4.905;QD=44.76;ReadPosRankSum=-1.152;VQSLOD=-0.4434;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:60.51:0,61,1782	0/0:15,0:15:39.13:0,39,2566	0/0:36,0:11:3.64:0,4,529	0/0:45,0:25:38.13:0,38,805	0/0:25,0:25:63.22:0,63,3724	0/0:23,0:23:57.20:0,57,3647	0/0:64,0:64:99:0,123,6317	0/0:40,0:39:48.16:0,48,1852	0/0:40,0:40:93.31:0,93,5420	0/0:36,0:36:78.25:0,78,5339	0/0:10,0:10:21.07:0,21,1355	0/0:44,0:44:99:0,99,6401	0/0:37,0:36:87.30:0,87,5731	0/0:42,0:42:99:0,108,7108	0/0:29,0:29:63.22:0,63,4348	0/0:22,0:22:54.19:0,54,3682	0/0:39,0:39:96.31:0,96,5460	0/0:37,0:37:16.66:0,17,4832	0/0:28,0:25:51.15:0,51,2413	0/0:23,0:22:48.16:0,48,2762	0/0:174,0:174:99:0,368,23151	0/0:14,0:14:36.12:0,36,2087	0/0:25,0:25:57.18:0,57,3683	0/0:54,0:54:99:0,132,9633	0/0:22,0:22:51.18:0,51,3268	1/1:8,22:30:51.62:1733,52,0	1/1:17,0:17:11.36:588,11,0	1/1:9,7:16:15.05:634,15,0
chr10	4561073	.	GCA	G	153.89	PASS	AB=0.912;AC=3;AF=0.054;AN=56;BaseQRankSum=6.448;DP=987;FS=0.000;HRun=0;HaplotypeScore=154.6856;InbreedingCoeff=-0.0567;MQ=57.05;MQ0=9;MQRankSum=-6.064;QD=2.85;ReadPosRankSum=0.044;VQSLOD=2.5446;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:53.64:0,54,904	0/0:17,0:17:48.16:0,48,787	0/0:37,0:13:33.08:0,33,518	0/0:39,0:23:45.78:0,46,622	0/0:27,0:27:78.27:0,78,1316	0/0:23,0:23:60.21:0,60,1029	0/0:60,1:61:99:0,138,2330	0/0:32,0:30:66.22:0,66,1094	0/0:41,0:41:99:0,105,1792	0/0:36,0:36:90.30:0,90,1511	0/0:9,0:9:21.07:0,21,360	0/0:47,0:47:99:0,117,1958	0/0:35,0:34:96.33:0,96,1639	0/0:45,0:45:99:0,126,2102	0/0:27,0:27:69.24:0,69,1176	0/0:22,0:22:57.20:0,57,977	0/0:35,0:35:99:0,105,1739	0/0:37,1:39:74.37:0,74,1540	0/0:30,0:25:69.22:0,69,1142	0/0:25,0:24:66.21:0,66,1101	0/0:163,0:163:99:0,421,7123	0/0:14,0:14:39.13:0,39,662	0/0:26,0:26:66.23:0,66,1125	0/0:52,0:52:99:0,138,2359	0/0:21,0:21:57.19:0,57,963	0/1:26,0:26:88.97:89,0,184	0/1:9,5:14:83.47:122,0,83	0/1:14,0:14:40.28:43,0,40
chr10	4561086	.	C	CAT	592.85	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.165;DP=939;FS=5.439;HRun=0;HaplotypeScore=155.1658;InbreedingCoeff=0.9504;MQ=60.17;MQ0=10;MQRankSum=-5.814;QD=14.82;ReadPosRankSum=0.340;VQSLOD=3.4460;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:39.10:0,39,584	0/0:16,0:16:48.16:0,48,729	0/0:31,0:14:36.09:0,36,506	0/0:36,0:23:46.18:0,46,559	0/0:26,0:26:78.26:0,78,1187	0/0:22,0:22:66.22:0,66,1007	0/0:53,1:54:99:0,137,2032	0/0:39,0:36:93.54:0,94,1401	0/0:38,0:38:99:0,102,1493	0/0:33,0:33:93.14:0,93,1399	0/0:7,0:7:21.07:0,21,318	0/0:46,0:46:99:0,129,1886	0/0:34,0:33:93.29:0,93,1389	0/0:44,0:44:99:0,132,1921	0/0:28,0:28:75.23:0,75,1106	0/0:24,0:24:72.24:0,72,1101	0/0:37,0:37:99:0,101,1591	0/0:34,1:35:49.97:0,50,1410	0/0:27,0:22:66.20:0,66,968	0/0:24,0:23:66.22:0,66,1001	0/0:160,0:160:99:0,439,6616	0/0:13,0:13:36.11:0,36,526	0/0:23,0:23:63.04:0,63,964	0/0:53,0:53:99:0,150,2248	0/0:18,0:18:54.16:0,54,803	1/1:22,0:22:28.95:359,29,0	1/1:2,6:8:18.03:278,18,0	1/1:10,0:10:5.21:88,5,0
chr10	4561097	.	GCA	G	1691.01	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=8.671;DP=947;FS=16.936;HRun=0;HaplotypeScore=152.0800;InbreedingCoeff=0.8071;MQ=60.15;MQ0=9;MQRankSum=-1.900;QD=19.66;ReadPosRankSum=-3.933;VQSLOD=1.7234;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:8,23:31:32.59:318,33,0	0/0:15,0:15:39.12:0,39,636	0/0:33,0:18:35.88:0,36,532	0/0:31,0:18:15.33:0,15,351	0/0:28,0:28:78.27:0,78,1318	0/0:21,0:21:57.17:0,57,936	0/0:52,0:52:99:0,123,2052	1/1:9,36:42:99:1493,117,0	0/0:38,0:38:99:0,99,1679	0/0:34,0:34:87.30:0,87,1479	0/0:8,0:8:24.07:0,24,381	0/0:48,0:48:99:0,135,2250	0/0:33,1:34:54.27:0,54,1441	0/0:42,0:42:99:0,105,1750	0/0:32,0:32:81.28:0,81,1356	0/0:25,0:25:60.21:0,60,1017	0/0:35,0:35:72.24:0,72,1258	0/0:37,0:37:82.19:0,82,1334	0/0:22,1:19:18.14:0,18,828	0/0:20,0:20:54.18:0,54,918	0/0:152,0:152:99:0,391,6459	0/0:12,0:12:27.09:0,27,458	0/0:25,0:25:63.20:0,63,1033	0/0:60,0:60:99:0,172,2881	0/0:18,0:18:42.14:0,42,709	0/0:28,0:28:18.60:0,19,489	0/0:9,0:9:24.08:0,24,408	0/1:10,0:10:5.69:6,0,138
chr10	4561144	.	C	CAT	214.59	PASS	AB=0.740;AC=2;AF=0.036;AN=56;BaseQRankSum=6.151;DP=934;FS=2.350;HRun=0;HaplotypeScore=138.4047;InbreedingCoeff=-0.0374;MQ=58.73;MQ0=16;MQRankSum=-6.144;QD=3.97;ReadPosRankSum=-2.880;VQSLOD=2.5003;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:18,9:27:99:156,0,117	0/0:13,0:13:39.05:0,39,563	0/0:51,0:8:18.94:0,19,253	0/0:58,0:21:31.84:0,32,415	0/0:29,0:29:81.20:0,81,1152	0/0:16,0:16:42.07:0,42,554	0/0:47,0:47:99:0,135,1956	0/1:17,10:25:99:148,0,364	0/0:42,0:42:99:0,117,1745	0/0:45,0:45:99:0,132,2001	0/0:16,0:16:45.09:0,45,612	0/0:51,0:51:99:0,141,2088	0/0:28,0:28:84.18:0,84,1171	0/0:29,0:29:87.25:0,87,1263	0/0:26,0:26:66.19:0,66,964	0/0:24,0:24:66.18:0,66,937	0/0:36,1:37:39.03:0,39,1231	0/0:32,0:32:53.76:0,54,1174	0/0:24,0:18:50.84:0,51,722	0/0:27,0:27:81.24:0,81,1185	0/0:114,3:115:99:0,313,4522	0/0:14,0:14:42.13:0,42,622	0/0:25,0:25:60.64:0,61,873	0/0:48,0:48:99:0,130,1992	0/0:13,0:13:39.11:0,39,556	0/0:38,0:38:95.86:0,96,1465	0/0:16,0:16:38.96:0,39,565	0/0:13,0:13:24.03:0,24,339
chr10	4561168	.	CA	C	1010.95	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=8.076;DP=830;FS=8.740;HRun=2;HaplotypeScore=103.2887;InbreedingCoeff=0.9156;MQ=63.18;MQ0=8;MQRankSum=-2.242;QD=28.08;ReadPosRankSum=-4.673;VQSLOD=1.2849;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:6.88:0,7,17	0/0:12,0:12:36.11:0,36,516	0/0:42,0:12:33.03:0,33,366	0/0:49,0:18:31.57:0,32,382	0/0:26,0:26:75.25:0,75,1104	0/0:11,1:12:29.38:0,29,433	0/0:42,0:42:99:0,122,1788	1/1:5,31:35:90.27:1106,90,0	0/0:31,0:31:75.24:0,75,1098	0/0:45,0:45:99:0,132,1933	0/0:19,0:19:54.18:0,54,809	0/0:40,0:40:99:0,114,1634	0/0:26,0:26:78.26:0,78,1144	0/0:29,0:29:84.28:0,84,1235	0/0:20,0:20:54.14:0,54,747	0/0:22,0:22:63.21:0,63,935	0/0:37,0:37:47.18:0,47,1243	0/0:25,0:25:69.15:0,69,979	0/0:21,0:20:58.07:0,58,826	0/0:20,0:20:60.19:0,60,871	0/0:89,0:89:99:0,235,3391	0/0:16,0:16:48.16:0,48,719	0/0:19,0:19:45.15:0,45,669	0/0:47,0:47:99:0,123,1824	0/0:14,0:14:42.14:0,42,630	0/0:37,0:37:99:0,105,1569	0/0:11,0:11:30.10:0,30,445	0/0:10,0:10:21.07:0,21,315
chr10	4561169	.	AAC	A	511.42	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.592;DP=826;FS=6.219;HRun=0;HaplotypeScore=118.9779;InbreedingCoeff=0.9762;MQ=63.33;MQ0=8;MQRankSum=-4.745;QD=7.63;ReadPosRankSum=-4.626;VQSLOD=1.9729;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:4,23:33:23.10:305,23,0	0/0:12,0:12:30.10:0,30,508	0/0:40,0:12:13.30:0,13,282	0/0:47,0:18:17.34:0,17,327	0/0:26,0:26:66.17:0,66,1067	0/0:13,0:13:27.53:0,28,406	0/0:41,0:42:99:0,117,1882	1/1:32,0:33:49.77:327,50,0	0/0:29,0:29:75.24:0,75,1243	0/0:46,0:46:99:0,123,1983	0/0:19,0:19:57.16:0,57,908	0/0:38,0:39:93.29:0,93,1548	0/0:26,0:26:75.21:0,75,1235	0/0:29,0:29:69.24:0,69,1195	0/0:20,0:20:36.09:0,36,568	0/0:22,0:22:60.19:0,60,990	0/0:34,0:37:76.67:0,77,1356	0/0:25,0:25:60.18:0,60,1008	0/0:20,1:20:20.20:0,20,885	0/0:22,0:22:57.18:0,57,941	0/0:83,0:87:99:0,199,3336	0/0:16,0:16:48.13:0,48,776	0/0:19,0:19:51.17:0,51,847	0/0:47,0:47:99:0,114,1966	0/0:15,0:15:42.14:0,42,728	0/0:37,0:37:99:0,105,1715	0/0:11,0:11:27.09:0,27,467	0/0:10,0:10:21.04:0,21,334
chr10	4561217	.	GT	G	1484.34	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=4.701;DP=646;FS=0.910;HRun=13;HaplotypeScore=78.2041;InbreedingCoeff=0.8391;MQ=63.63;MQ0=2;MQRankSum=-2.501;QD=9.96;ReadPosRankSum=3.728;VQSLOD=3.3096;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,24:33:53.47:394,53,0	0/0:11,0:11:27.04:0,27,263	0/1:22,0:9:7.52:8,0,75	0/0:19,0:12:10.10:0,10,90	0/0:22,0:23:43.32:0,43,408	0/0:18,0:18:48.03:0,48,450	0/0:33,0:34:65.86:0,66,602	0/0:27,1:29:25.83:0,26,381	0/0:26,0:30:50.83:0,51,457	0/0:29,2:33:9.30:0,9,404	0/0:15,0:17:32.96:0,33,298	0/0:25,1:26:20.18:0,20,332	0/0:18,1:20:23.07:0,23,368	0/0:21,0:24:53.68:0,54,471	1/1:2,12:14:32.80:238,33,0	0/0:16,3:19:4.26:0,4,365	1/1:8,23:31:36.36:430,36,0	1/1:6,18:24:41.66:304,42,0	0/0:10,0:10:20.68:0,21,163	0/0:14,0:17:29.79:0,30,251	0/0:33,4:38:13.39:0,13,554	0/0:11,1:14:13.78:0,14,250	0/0:19,0:19:34.29:0,34,320	0/0:37,1:45:70.88:0,71,811	1/1:5,16:22:21.29:286,21,0	0/0:10,0:24:46.14:0,46,268	0/0:5,0:13:20.13:0,20,118	0/0:4,0:10:17.37:0,17,115
chr10	4561698	.	AGT	A	39.16	PASS	AB=0.967;AC=15;AF=0.341;AN=44;BaseQRankSum=3.298;DP=621;FS=11.156;HRun=0;HaplotypeScore=74.3535;InbreedingCoeff=0.0789;MQ=68.59;MQ0=8;MQRankSum=-0.894;QD=0.15;ReadPosRankSum=-0.188;VQSLOD=0.5454;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:47,4:50:0.58:1,0,192	0/0:2,0:2:3.01:0,3,44	./.	./.	0/1:14,0:14:3.87:4,0,99	0/0:6,0:6:5.86:0,6,38	0/0:36,0:36:6:0,6,68	./.	0/0:15,0:15:18.01:0,18,204	0/1:20,0:20:21.68:22,0,57	0/1:15,0:15:4.83:5,0,97	0/0:24,4:28:9.01:0,9,95	0/0:27,0:27:23.39:0,23,252	0/1:30,0:30:19.28:19,0,74	1/1:13,0:12:3.89:28,4,0	0/1:19,1:20:10.91:11,0,164	1/1:15,0:27:2.68:14,3,0	0/0:17,0:17:1.09:0,1,54	0/0:23,0:23:6.02:0,6,70	./.	0/0:66,0:69:20.60:0,21,166	./.	0/0:10,0:10:5:0,5,26	0/1:36,5:41:14.10:14,0,128	1/1:9,0:9:2.37:8,2,0	0/0:18,0:18:2.17:0,2,8	1/1:12,0:18:8.39:42,8,0	./.
chr10	4561727	.	GTGTGTGTGTGTGTGTGTGTGTGTA	G	179.94	PASS	AC=2;AF=0.037;AN=54;BaseQRankSum=4.531;DP=553;FS=4.582;HRun=0;HaplotypeScore=241.6108;InbreedingCoeff=0.6839;MQ=52.54;MQ0=15;MQRankSum=-0.944;QD=16.36;ReadPosRankSum=-0.976;VQSLOD=2.3636;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:40:96.19:0,96,5665	0/0:2,0:2:3.01:0,3,316	0/0:8,0:5:9.02:0,9,123	0/0:14,0:10:18.01:0,18,283	0/0:11,0:10:24.08:0,24,2148	0/0:13,0:13:33.07:0,33,1902	0/0:43,0:43:78.78:0,79,3403	1/1:2,9:11:26.85:273,27,0	0/0:15,0:15:33.10:0,33,2719	0/0:17,0:17:44.87:0,45,2228	0/0:13,0:14:16.61:0,17,1419	0/0:29,0:28:43.01:0,43,2193	0/0:22,0:22:51.56:0,52,3077	0/0:29,0:29:41.44:0,41,1901	0/0:15,0:13:22.51:0,23,1496	0/0:23,0:23:58.05:0,58,3742	0/0:26,0:25:23.04:0,23,798	0/0:15,0:15:17.42:0,17,886	0/0:7,0:7:17.37:0,17,730	./.	0/0:69,0:67:99:0,105,6552	0/0:12,0:12:27.02:0,27,1202	0/0:13,0:13:24.04:0,24,1230	0/0:45,0:45:74.26:0,74,5616	0/0:11,0:11:9.02:0,9,346	0/0:18,0:18:51.14:0,51,2063	0/0:19,0:17:31.86:0,32,1021	0/0:5,0:3:6.02:0,6,400
chr10	4561747	.	GTGTA	G	696.31	PASS	AB=1.000;AC=10;AF=0.179;AN=56;BaseQRankSum=5.076;DP=544;FS=8.721;HRun=0;HaplotypeScore=90.9690;InbreedingCoeff=0.6170;MQ=57.21;MQ0=14;MQRankSum=-1.451;QD=7.03;ReadPosRankSum=-1.056;VQSLOD=0.9222;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:44:85.58:0,86,1061	0/0:6,0:6:14.65:0,15,144	0/1:20,0:9:7.62:8,0,160	0/0:13,0:7:15.02:0,15,147	0/0:14,0:13:29.97:0,30,422	0/0:17,0:17:41.86:0,42,401	0/0:33,0:33:54.88:0,55,509	1/1:16,0:16:41.83:337,42,0	0/0:14,0:14:33.03:0,33,486	0/0:15,0:15:35.91:0,36,405	0/0:12,0:12:18.14:0,18,250	0/0:23,0:22:27.44:0,27,225	0/0:26,0:26:47.90:0,48,529	0/0:31,0:31:41.96:0,42,372	1/1:22,0:20:44.60:387,45,0	0/0:24,0:24:45.45:0,45,424	0/0:25,0:24:9.12:0,9,112	1/1:5,10:15:3.01:53,3,0	0/0:7,0:7:17.96:0,18,192	0/0:4,0:4:3:0,3,25	0/0:43,0:43:77.64:0,78,872	0/0:14,0:14:29.77:0,30,228	0/0:16,0:16:29.96:0,30,314	0/0:43,0:43:61.30:0,61,771	1/1:1,10:11:3.01:53,3,0	0/0:16,0:16:41.94:0,42,356	0/1:15,0:14:6.55:7,0,92	0/0:4,0:3:5.90:0,6,40
chr10	4562411	.	A	AAAAAAC	4839.55	PASS	AB=1.000;AC=17;AF=0.315;AN=54;BaseQRankSum=8.759;DP=504;FS=12.814;HRun=0;HaplotypeScore=121.3747;InbreedingCoeff=0.7924;MQ=48.41;MQ0=18;MQRankSum=-10.842;QD=21.51;ReadPosRankSum=-5.059;VQSLOD=2.4796;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:24,13:38:32.91:861,33,0	0/0:2,0:2:6.02:0,6,121	0/0:8,0:2:5.89:0,6,76	./.	0/0:9,0:8:6.02:0,6,121	0/0:13,0:13:27.08:0,27,506	0/0:26,0:26:45.13:0,45,782	0/1:23,0:21:9.78:13,0,10	0/0:21,0:21:30.09:0,30,568	0/0:14,0:14:33.10:0,33,526	0/0:8,0:7:4.26:0,4,96	0/0:30,0:30:42.09:0,42,749	0/0:17,0:17:18.04:0,18,270	0/0:19,0:19:36.11:0,36,614	1/1:5,0:16:12.04:313,12,0	0/0:16,0:16:21.07:0,21,400	1/1:24,12:35:15.05:450,15,0	1/1:30,0:26:18.06:406,18,0	0/0:15,0:13:9.03:0,9,181	0/0:12,0:10:11.99:0,12,186	0/0:15,0:15:21.07:0,21,346	0/0:13,0:13:27.08:0,27,488	0/0:6,0:6:5.53:0,6,98	0/0:29,0:26:54.11:0,54,886	1/1:8,0:15:18.06:453,18,0	1/1:33,0:32:57.19:1328,57,0	1/1:29,0:28:39.11:864,39,0	1/1:4,0:4:6.02:151,6,0
chr10	4562413	.	AAAAC	A	362.28	PASS	AB=0.667;AC=1;AF=0.019;AN=54;BaseQRankSum=5.139;DP=502;FS=8.350;HRun=0;HaplotypeScore=83.8334;InbreedingCoeff=-0.0412;MQ=48.50;MQ0=18;MQRankSum=-4.715;QD=15.10;ReadPosRankSum=-1.464;VQSLOD=2.2020;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:38:70.10:0,70,1088	0/0:2,0:2:6.02:0,6,154	0/0:9,0:2:6.02:0,6,139	./.	0/0:8,0:7:21.07:0,21,368	0/0:12,0:12:33.11:0,33,757	0/0:25,0:25:66.22:0,66,1501	0/1:12,12:22:99:436,0,102	0/0:20,0:20:60.17:0,60,1128	0/0:16,0:16:48.16:0,48,1097	0/0:8,0:7:15.04:0,15,257	0/0:27,0:27:75.20:0,75,1524	0/0:17,0:17:51.17:0,51,955	0/0:21,0:21:60.20:0,60,1260	0/0:17,0:17:24.08:0,24,416	0/0:16,0:16:42.12:0,42,824	0/0:35,0:34:59.27:0,59,974	0/0:28,0:24:48.51:0,49,656	0/0:17,0:15:42.14:0,42,716	0/0:13,0:11:27.09:0,27,487	0/0:15,0:15:39.13:0,39,763	0/0:14,0:14:39.13:0,39,844	0/0:5,0:5:9.37:0,9,219	0/0:27,0:24:74.06:0,74,1630	0/0:15,0:15:30.08:0,30,443	0/0:33,0:32:2.24:0,2,1066	0/0:29,0:28:18.73:0,19,711	0/0:4,0:4:6.02:0,6,112
chr10	4562880	.	GT	G	614.87	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.204;DP=678;FS=1.859;HRun=2;HaplotypeScore=67.0345;InbreedingCoeff=0.9979;MQ=85.31;MQ0=0;MQRankSum=-0.543;QD=30.74;ReadPosRankSum=-4.225;VQSLOD=2.1686;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,163,2388	0/0:19,0:19:57.19:0,57,853	0/0:24,0:24:58.01:0,58,952	0/0:20,0:20:51.15:0,51,730	0/0:29,0:29:84.27:0,84,1239	0/0:21,0:21:60.19:0,60,878	0/0:34,0:34:95.86:0,96,1438	1/1:0,20:20:57.15:710,57,0	0/0:28,0:28:81.26:0,81,1194	0/0:33,0:33:93.31:0,93,1371	0/0:16,0:16:48.15:0,48,701	0/0:21,0:21:63.21:0,63,944	0/0:16,0:16:48.16:0,48,717	0/0:27,0:27:75.21:0,75,1096	0/0:28,0:28:81.27:0,81,1214	0/0:25,0:25:75.24:0,75,1102	0/0:35,0:35:99:0,102,1527	0/0:28,0:28:84.20:0,84,1195	0/0:17,0:17:48.16:0,48,716	0/0:14,0:14:42.13:0,42,609	0/0:36,0:36:99:0,105,1574	0/0:20,0:20:60.20:0,60,898	0/0:19,0:19:54.63:0,55,771	0/0:26,0:25:78.25:0,78,1148	0/0:22,0:22:66.20:0,66,951	0/0:21,0:21:57.18:0,57,834	0/0:8,0:7:24.08:0,24,358	0/0:16,0:16:48.15:0,48,699
chr10	4563130	.	C	CA	1396.81	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-7.648;DP=694;FS=3.215;HRun=1;HaplotypeScore=68.0054;InbreedingCoeff=0.9678;MQ=90.17;MQ0=0;MQRankSum=-0.251;QD=39.91;ReadPosRankSum=-4.956;VQSLOD=2.1330;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,130,1769	0/0:6,0:6:14.98:0,15,168	0/0:29,0:29:84.26:0,84,1154	0/0:24,0:24:69.07:0,69,889	0/0:11,0:11:33.11:0,33,461	0/0:18,0:18:51.14:0,51,679	0/0:31,0:31:93.30:0,93,1282	1/1:3,32:35:99:1492,99,0	0/0:26,0:26:72.23:0,72,989	0/0:27,0:27:75.20:0,75,999	0/0:14,0:14:39.06:0,39,505	0/0:31,0:31:90.30:0,90,1252	0/0:22,0:22:63.21:0,63,880	0/0:28,0:28:78.26:0,78,1089	0/0:35,0:35:99:0,102,1425	0/0:23,0:23:69.20:0,69,944	0/0:44,0:44:99:0,132,1845	0/0:20,0:20:57.19:0,57,797	0/0:21,0:21:63.21:0,63,881	0/0:11,0:11:27.09:0,27,377	0/0:58,0:58:99:0,169,2313	0/0:19,0:19:57.15:0,57,771	0/0:20,0:20:57.16:0,57,758	0/0:28,0:28:81.23:0,81,1110	0/0:14,0:14:36.08:0,36,479	0/0:31,0:31:90.29:0,90,1241	0/0:17,0:16:51.08:0,51,668	0/0:5,0:5:15.05:0,15,210
chr10	4564230	.	CGCAGGG	C	456.75	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.739;DP=580;FS=14.318;HRun=0;HaplotypeScore=128.4410;InbreedingCoeff=0.9882;MQ=69.89;MQ0=0;MQRankSum=0.735;QD=19.86;ReadPosRankSum=-3.258;VQSLOD=1.5378;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:51.11:0,51,1422	0/0:12,0:12:30.09:0,30,837	0/0:24,0:23:38.72:0,39,930	0/0:26,0:24:33.10:0,33,837	0/0:22,0:22:48.15:0,48,1421	0/0:18,0:18:42.09:0,42,1155	0/0:24,0:24:45.15:0,45,1346	1/1:12,11:23:33.07:551,33,0	0/0:20,0:20:45.12:0,45,1223	0/0:24,0:24:63.20:0,63,1872	0/0:15,0:15:33.10:0,33,906	0/0:32,0:32:75.23:0,75,2295	0/0:21,0:21:48.13:0,48,1407	0/0:19,0:19:33.09:0,33,896	0/0:24,0:24:60.19:0,60,1734	0/0:21,0:21:54.16:0,54,1657	0/0:27,0:27:69.19:0,69,2179	0/0:16,0:16:45.15:0,45,1478	0/0:11,0:11:27.06:0,27,657	0/0:12,0:12:30.07:0,30,759	0/0:29,0:29:72.22:0,72,2138	0/0:14,0:14:36.11:0,36,981	0/0:17,0:17:39.11:0,39,1067	0/0:25,0:25:69.23:0,69,2203	0/0:14,0:14:18.06:0,18,554	0/0:26,0:26:54.15:0,54,1545	0/0:21,0:21:48.16:0,48,1575	0/0:14,0:14:30.07:0,30,789
chr10	4564785	.	TG	T	770.14	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.799;DP=648;FS=0.000;HRun=4;HaplotypeScore=63.5416;InbreedingCoeff=0.9984;MQ=86.25;MQ0=0;MQRankSum=1.103;QD=26.56;ReadPosRankSum=-3.871;VQSLOD=1.2682;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:96.30:0,96,1323	0/0:16,0:16:48.16:0,48,671	0/0:29,0:29:84.16:0,84,1098	0/0:21,0:21:30.21:0,30,551	0/0:20,0:20:54.18:0,54,754	0/0:22,0:22:66.22:0,66,924	0/0:28,0:28:78.24:0,78,1074	1/1:3,26:29:75.19:865,75,0	0/0:30,0:30:87.25:0,87,1163	0/0:25,0:25:63.19:0,63,846	0/0:16,0:16:48.16:0,48,670	0/0:25,0:25:75.25:0,75,1047	0/0:11,0:11:27.09:0,27,378	0/0:21,0:21:63.21:0,63,882	0/0:31,0:31:90.27:0,90,1209	0/0:23,0:23:66.19:0,66,889	0/0:31,0:31:90.18:0,90,1182	0/0:21,0:21:57.16:0,57,763	0/0:15,0:15:42.12:0,42,552	0/0:18,0:18:48.15:0,48,654	0/0:19,0:19:42.11:0,42,552	0/0:20,0:20:57.17:0,57,758	0/0:15,0:15:45.15:0,45,625	0/0:49,0:49:99:0,144,1955	0/0:17,0:17:51.17:0,51,713	0/0:23,0:23:69.22:0,69,945	0/0:24,0:24:66.20:0,66,905	0/0:14,0:14:42.14:0,42,585
chr10	4564916	.	AG	A	639.87	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.314;DP=631;FS=0.770;HRun=7;HaplotypeScore=64.2058;InbreedingCoeff=0.9975;MQ=84.42;MQ0=0;MQRankSum=-0.999;QD=23.70;ReadPosRankSum=-2.830;VQSLOD=2.6255;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:56:99:0,162,1984	0/0:13,0:13:39.12:0,39,490	0/0:18,0:18:27.75:0,28,465	0/0:24,0:24:62.87:0,63,712	0/0:21,0:21:57.16:0,57,701	0/0:25,0:25:72.22:0,72,894	0/0:31,0:31:81.26:0,81,1017	1/1:3,24:27:72.16:735,72,0	0/0:29,0:29:87.28:0,87,1094	0/0:20,0:20:51.14:0,51,614	0/0:25,0:25:69.21:0,69,851	0/0:17,0:17:48.15:0,48,603	0/0:19,0:19:54.17:0,54,679	0/0:18,0:18:54.15:0,54,654	0/0:20,0:20:57.18:0,57,717	0/0:15,0:15:45.13:0,45,552	0/0:31,0:31:87.28:0,87,1094	0/0:18,0:18:45.11:0,45,549	0/0:18,0:18:48.15:0,48,604	0/0:19,0:19:51.16:0,51,641	0/0:34,0:34:99:0,99,1218	0/0:23,0:23:63.18:0,63,792	0/0:12,0:12:30.10:0,30,377	0/0:23,0:23:63.20:0,63,793	0/0:25,0:25:72.23:0,72,906	0/0:18,0:18:45.14:0,45,566	0/0:23,0:23:57.18:0,57,715	0/0:9,0:9:27.09:0,27,340
chr10	4565042	.	GTATGTTAGCATTGGA	G	166.82	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.432;DP=746;FS=6.995;HRun=0;HaplotypeScore=292.6626;InbreedingCoeff=0.5576;MQ=77.63;MQ0=0;MQRankSum=-2.424;QD=7.25;ReadPosRankSum=-0.038;VQSLOD=1.2771;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:45.15:0,45,2646	0/0:10,0:10:9.03:0,9,635	0/0:32,0:30:5.76:0,6,220	0/0:22,0:21:5.99:0,6,105	0/0:24,0:24:6.02:0,6,361	0/0:27,0:27:39.13:0,39,2250	0/0:33,0:33:42.13:0,42,2213	0/0:36,0:36:15.04:0,15,466	0/0:35,0:35:51.18:0,51,2956	0/0:31,0:31:36.12:0,36,1925	0/0:13,0:13:9.03:0,9,639	0/0:21,0:21:36.12:0,36,2045	0/0:27,0:27:45.15:0,45,2855	0/0:23,0:23:36.12:0,36,2167	0/0:30,0:30:39.13:0,39,2452	0/0:30,0:30:54.19:0,54,3591	1/1:11,12:23:6.02:247,6,0	0/0:22,0:22:33.11:0,33,1959	0/0:14,0:14:15.05:0,15,875	0/0:21,0:21:18.06:0,18,1135	0/0:54,0:54:72.25:0,72,4582	0/0:17,0:17:21.07:0,21,1131	0/0:24,0:24:21.07:0,21,1105	0/0:51,0:51:99:0,102,6103	0/0:17,0:17:24.08:0,24,1434	0/0:22,0:22:18.06:0,18,1183	0/0:26,0:26:42.14:0,42,2927	0/0:15,0:15:18.06:0,18,994
chr10	4565227	.	AT	A	626.37	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.639;DP=650;FS=14.503;HRun=7;HaplotypeScore=60.0130;InbreedingCoeff=0.9996;MQ=83.14;MQ0=0;MQRankSum=-0.468;QD=20.21;ReadPosRankSum=-3.320;VQSLOD=1.5074;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:43:99:0,120,1476	0/0:17,0:17:45.14:0,45,565	0/0:26,0:26:63.09:0,63,724	0/0:17,0:16:41.62:0,42,492	0/0:24,0:24:69.17:0,69,837	0/0:21,0:21:57.17:0,57,703	0/0:21,0:21:60.18:0,60,742	1/1:7,24:31:72.13:721,72,0	0/0:25,0:25:69.22:0,69,867	0/0:24,0:24:63.20:0,63,783	0/0:25,0:25:66.20:0,66,808	0/0:32,0:32:87.28:0,87,1094	0/0:21,0:21:60.19:0,60,754	0/0:19,0:19:48.14:0,48,589	0/0:20,0:20:48.15:0,48,604	0/0:27,0:27:78.23:0,78,957	0/0:23,0:23:60.19:0,60,755	0/0:27,0:27:66.17:0,66,798	0/0:23,0:23:63.19:0,63,776	0/0:22,0:22:63.19:0,63,781	0/0:34,0:34:93.30:0,93,1170	0/0:19,0:19:54.16:0,54,667	0/0:13,0:13:39.12:0,39,479	0/0:20,0:20:60.18:0,60,742	0/0:16,0:16:42.13:0,42,523	0/0:25,0:25:72.22:0,72,885	0/0:22,0:22:66.17:0,66,810	0/0:12,0:12:33.11:0,33,415
chr10	4565331	.	G	GTT	1260.97	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=9.579;DP=653;FS=15.334;HRun=9;HaplotypeScore=89.5237;InbreedingCoeff=0.9330;MQ=72.41;MQ0=2;MQRankSum=-1.958;QD=12.36;ReadPosRankSum=-3.838;VQSLOD=-0.3944;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:91.09:0,91,960	0/0:13,0:13:33.08:0,33,351	0/0:28,0:21:43.66:0,44,401	0/0:21,0:18:18.76:0,19,194	0/0:34,0:34:90.14:0,90,924	0/0:23,0:24:65.88:0,66,682	0/0:19,0:19:45.08:0,45,470	1/1:7,25:36:87.47:1090,87,0	0/0:20,0:20:51.11:0,51,535	0/0:32,0:32:77.75:0,78,807	0/0:28,0:28:78.17:0,78,815	0/0:27,0:27:72.11:0,72,741	0/0:19,0:19:45.10:0,45,479	0/0:21,0:21:51.08:0,51,535	0/0:22,0:22:54.08:0,54,559	0/0:15,0:16:33.03:0,33,407	0/0:31,0:31:87.20:0,87,925	0/0:28,0:26:66.14:0,66,702	0/0:18,0:18:30.01:0,30,311	0/0:20,0:20:45.08:0,45,470	0/0:10,0:10:27.05:0,27,287	0/0:18,0:18:42.10:0,42,447	0/0:20,0:20:54.11:0,54,565	0/0:18,0:18:42.07:0,42,437	0/0:27,0:28:68.72:0,69,741	1/1:4,0:24:20.98:140,21,0	1/1:7,0:24:9.23:98,9,0	1/1:1,0:17:3.52:79,4,0
chr10	4566473	.	AT	A	618.22	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.116;DP=524;FS=0.706;HRun=9;HaplotypeScore=57.3217;InbreedingCoeff=0.7603;MQ=68.96;MQ0=1;MQRankSum=0.802;QD=17.66;ReadPosRankSum=-5.314;VQSLOD=2.2396;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:66.17:0,66,749	0/0:9,0:9:27.07:0,27,303	0/0:12,0:10:19.10:0,19,170	0/0:12,0:11:1.42:0,1,164	0/0:32,0:33:84.07:0,84,939	0/0:17,0:17:51.15:0,51,588	0/0:13,1:14:8.63:0,9,343	1/1:9,26:35:78.03:713,78,0	0/0:16,0:16:48.14:0,48,554	0/0:25,0:25:60.18:0,60,690	0/0:29,0:29:75.19:0,75,852	0/0:7,0:7:18.05:0,18,207	0/0:11,0:11:30.09:0,30,346	0/0:15,0:15:31.33:0,31,348	0/0:16,0:16:48.14:0,48,554	0/0:10,0:10:30.08:0,30,337	0/0:33,0:33:81.24:0,81,934	0/0:28,0:28:78.22:0,78,893	0/0:8,0:8:18.05:0,18,208	0/0:31,0:31:87.26:0,87,1003	0/0:10,0:10:24.05:0,24,266	0/0:12,0:12:33.10:0,33,380	0/0:28,0:28:75.22:0,75,865	0/0:12,0:12:33.10:0,33,381	0/0:18,0:18:48.14:0,48,554	0/0:16,0:16:33.48:0,33,155	0/0:18,0:19:48.29:0,48,202	0/0:20,0:20:40.18:0,40,166
chr10	4566475	.	T	TA	1878.83	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-8.217;DP=526;FS=1.139;HRun=0;HaplotypeScore=53.3162;InbreedingCoeff=0.9206;MQ=69.79;MQ0=1;MQRankSum=-0.184;QD=35.45;ReadPosRankSum=1.766;VQSLOD=3.1926;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:72.21:0,72,955	0/0:9,0:9:27.08:0,27,362	0/0:14,0:11:1.14:0,1,136	0/0:13,0:12:29.31:0,29,274	0/0:33,0:33:62.07:0,62,1160	0/0:18,0:18:54.16:0,54,734	0/0:14,0:14:42.04:0,42,517	0/0:34,0:34:93.49:0,93,596	0/0:17,0:17:48.16:0,48,667	0/0:25,0:25:75.22:0,75,978	0/0:30,0:30:87.22:0,87,1133	0/0:7,0:7:21.06:0,21,276	0/0:12,0:12:36.10:0,36,470	0/0:15,0:15:43.35:0,43,527	0/0:16,0:16:48.16:0,48,668	0/0:11,0:11:30.09:0,30,404	0/0:33,0:33:96.27:0,96,1257	0/0:28,0:28:82.80:0,83,1098	0/0:8,0:8:24.07:0,24,306	0/0:30,0:30:90.29:0,90,1238	0/0:9,0:9:27.07:0,27,343	0/0:12,0:12:36.11:0,36,486	0/0:29,0:29:84.26:0,84,1126	0/0:12,0:12:36.11:0,36,486	0/0:18,0:18:51.16:0,51,696	1/1:0,16:16:47.81:625,48,0	1/1:1,18:19:54.17:753,54,0	1/1:0,18:18:45.15:643,45,0
chr10	4568299	.	ATCAT	A	3032.95	PASS	AB=0.900;AC=9;AF=0.161;AN=56;BaseQRankSum=7.126;DP=628;FS=0.000;HRun=0;HaplotypeScore=101.6037;InbreedingCoeff=0.7508;MQ=68.00;MQ0=1;MQRankSum=0.131;QD=28.89;ReadPosRankSum=0.828;VQSLOD=3.4108;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:42:63.17:0,63,1402	0/0:10,0:10:24.08:0,24,574	0/0:20,0:17:9.03:0,9,185	0/0:13,0:11:6.49:0,6,113	0/0:26,0:26:48.15:0,48,1097	0/0:25,0:25:42.14:0,42,979	0/0:21,0:21:36.12:0,36,862	0/0:18,0:18:27.09:0,27,616	0/0:24,0:24:39.13:0,39,931	0/0:23,0:23:57.20:0,57,1364	0/0:22,0:22:48.16:0,48,1102	0/0:27,0:27:51.17:0,51,1168	0/0:18,0:18:36.12:0,36,831	0/0:19,0:19:36.12:0,36,824	0/0:29,0:29:51.16:0,51,1167	0/0:14,0:14:24.08:0,24,572	1/1:8,23:31:69.23:1099,69,0	0/0:24,0:24:42.10:0,42,950	0/0:24,0:24:33.08:0,33,731	0/1:8,1:9:32.71:33,0,267	0/0:38,0:38:66.23:0,66,1527	0/0:29,0:29:60.21:0,60,1410	0/0:15,0:15:24.08:0,24,572	0/0:15,0:15:39.09:0,39,876	0/0:26,0:26:54.19:0,54,1255	1/1:15,19:34:0.42:1002,0,0	1/1:9,16:25:54.18:860,54,0	1/1:3,3:6:12.04:191,12,0
chr10	4568364	.	G	GGTTTTTTT	1828.44	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-2.517;DP=624;FS=0.887;HRun=0;HaplotypeScore=180.6435;InbreedingCoeff=0.8723;MQ=71.03;MQ0=1;MQRankSum=-7.023;QD=43.53;ReadPosRankSum=-2.592;VQSLOD=3.1793;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:19,21:42:54.18:1923,54,0	0/0:15,0:15:33.06:0,33,621	0/0:34,0:24:14.24:0,14,250	0/0:14,0:11:5.69:0,6,110	0/0:20,0:20:39.08:0,39,711	0/0:27,0:27:48.14:0,48,992	0/0:18,0:18:39.06:0,39,810	0/0:39,0:39:51.01:0,51,534	0/0:18,0:18:28.29:0,28,600	0/0:25,0:25:48.12:0,48,851	0/0:15,0:15:24.02:0,24,546	0/0:16,0:16:39.09:0,39,854	0/0:16,0:16:45.12:0,45,924	0/0:29,0:29:65.99:0,66,1056	0/0:25,0:25:39.12:0,39,579	0/0:20,0:20:57.11:0,57,1208	0/0:30,0:30:48.15:0,48,804	0/0:18,0:18:33.08:0,33,434	0/0:22,0:21:33.08:0,33,604	0/0:21,0:21:48.13:0,48,968	0/0:21,0:21:30.07:0,30,553	0/0:23,0:23:36.11:0,36,795	0/0:14,0:14:24.06:0,24,445	0/0:20,0:20:39.09:0,39,817	0/0:27,0:27:49.40:0,49,710	0/0:25,0:25:48.13:0,48,677	0/0:23,0:23:26.93:0,27,321	0/0:7,0:7:18.01:0,18,219
chr10	4568365	.	G	GT	932.81	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=1.633;DP=630;FS=1.173;HRun=7;HaplotypeScore=97.2941;InbreedingCoeff=0.5113;MQ=70.08;MQ0=1;MQRankSum=-4.769;QD=10.85;ReadPosRankSum=-3.737;VQSLOD=1.7416;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:44,0:44:36.80:37,0,132	0/0:15,0:15:44.84:0,45,412	0/0:34,0:23:1.27:0,1,273	0/0:16,0:13:4.91:0,5,154	0/0:20,0:20:54.05:0,54,512	0/0:25,0:25:57.02:0,57,534	0/0:16,0:16:42.02:0,42,389	1/1:19,23:42:87.19:1002,87,0	0/0:19,0:19:45.02:0,45,428	0/0:25,0:25:60.09:0,60,579	0/0:15,0:15:36.04:0,36,342	0/0:17,0:17:42.02:0,42,400	0/0:16,0:16:47.81:0,48,436	0/0:28,0:28:77.84:0,78,711	0/0:25,0:25:57.08:0,57,545	0/0:20,0:20:60.09:0,60,578	0/0:30,0:30:66.07:0,66,628	0/0:18,0:18:39.01:0,39,366	0/0:23,0:22:40.57:0,41,493	0/0:22,0:22:54.08:0,54,521	0/0:19,0:19:45.02:0,45,425	0/0:22,0:22:59.82:0,60,556	0/0:16,0:16:36:0,36,338	0/0:21,0:21:53.96:0,54,491	0/0:27,0:27:66.08:0,66,626	0/0:25,0:25:72.11:0,72,693	0/0:23,0:23:41.84:0,42,395	0/0:7,0:7:20.96:0,21,185
chr10	4568381	.	G	GT	2094.43	PASS	AB=0.842;AC=16;AF=0.286;AN=56;BaseQRankSum=1.424;DP=638;FS=9.578;HRun=12;HaplotypeScore=86.8102;InbreedingCoeff=0.4885;MQ=66.45;MQ0=2;MQRankSum=0.311;QD=7.90;ReadPosRankSum=2.274;VQSLOD=2.0575;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:41,1:42:64.67:65,0,236	0/0:11,0:12:25.80:0,26,175	0/0:31,0:18:20.01:0,20,112	0/0:16,0:10:8.99:0,9,54	0/0:23,0:24:20.30:0,20,265	0/0:19,1:20:15.55:0,16,277	0/0:16,0:18:45.82:0,46,318	0/0:16,0:38:40.72:0,41,154	0/0:21,0:21:23.44:0,23,302	0/0:20,0:23:7.68:0,8,201	0/0:14,0:14:29.81:0,30,219	0/0:23,0:23:62.12:0,62,437	0/0:17,0:18:43.03:0,43,307	0/1:23,1:29:2.27:2,0,257	1/1:4,21:26:25.96:401,26,0	0/0:22,0:22:50.63:0,51,372	0/1:10,16:27:43.43:291,0,43	1/1:5,13:18:14.25:299,14,0	0/0:18,0:21:12.92:0,13,190	0/0:26,0:26:53.60:0,54,391	0/1:14,1:16:3.32:3,0,133	0/0:22,0:22:44.71:0,45,328	0/1:16,2:18:17.27:17,0,201	0/0:18,1:20:20.08:0,20,292	1/1:5,21:26:51.08:496,51,0	0/1:10,14:25:3.41:308,0,3	1/1:9,17:26:2.60:183,3,0	1/1:4,8:12:21.03:204,21,0
chr10	4568991	.	C	CTTT	3156.97	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=8.067;DP=540;FS=4.114;HRun=10;HaplotypeScore=88.9059;InbreedingCoeff=0.8997;MQ=75.79;MQ0=0;MQRankSum=-1.048;QD=20.77;ReadPosRankSum=0.310;VQSLOD=2.1065;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:9,22:33:61.43:1110,61,0	0/0:11,0:11:30.01:0,30,347	0/0:19,0:18:26.31:0,26,271	0/1:11,0:11:18.14:18,0,90	0/0:24,0:26:65.99:0,66,748	0/0:15,0:15:42.09:0,42,485	0/0:18,0:19:46.49:0,46,580	1/1:8,0:26:50.87:461,51,0	0/0:16,0:16:42.10:0,42,498	0/0:19,0:19:42.05:0,42,501	0/0:18,0:21:49.42:0,49,599	0/0:20,0:21:52.48:0,52,640	0/0:16,0:16:39.08:0,39,460	0/0:19,0:19:51.12:0,51,609	0/0:9,0:9:27.08:0,27,328	0/0:23,0:23:54.13:0,54,657	1/1:3,0:25:23.67:55,24,0	0/0:19,0:19:42.09:0,42,511	0/0:14,0:15:31.42:0,31,388	0/0:22,0:22:60.17:0,60,729	0/0:11,0:11:30.09:0,30,363	0/0:19,0:22:49.31:0,49,579	0/0:17,0:18:45.04:0,45,528	0/0:23,0:24:65.31:0,65,755	0/0:23,0:23:54.12:0,54,645	1/1:24,0:24:60.15:741,60,0	1/1:21,0:21:48.16:649,48,0	1/1:12,0:12:24.08:313,24,0
chr10	4568999	.	T	TTTC	3549.75	PASS	AB=1.000;AC=8;AF=0.143;AN=56;BaseQRankSum=4.745;DP=529;FS=0.951;HRun=0;HaplotypeScore=86.0582;InbreedingCoeff=0.7380;MQ=73.79;MQ0=0;MQRankSum=-3.087;QD=31.69;ReadPosRankSum=0.288;VQSLOD=3.4597;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:31,0:31:5.96:583,0,6	0/0:12,0:12:31.34:0,31,443	0/0:15,0:14:38.49:0,38,433	0/0:11,0:11:14.19:0,14,179	0/0:26,0:26:66.19:0,66,943	0/0:17,0:17:51.15:0,51,719	0/0:17,0:17:50.76:0,51,741	0/1:23,0:23:54.77:64,0,55	0/0:16,0:16:48.14:0,48,694	0/0:21,0:21:54.15:0,54,735	0/0:24,0:24:68.77:0,69,902	0/0:19,0:19:56.78:0,57,834	0/0:14,0:14:39.12:0,39,576	0/0:19,0:19:54.16:0,54,787	0/0:11,0:11:30.09:0,30,440	0/0:20,0:20:57.18:0,57,843	0/0:25,0:25:52.33:0,52,214	0/0:16,0:16:42.14:0,42,643	0/0:13,0:13:38.72:0,39,558	0/0:23,0:23:66.20:0,66,952	0/0:16,0:16:48.08:0,48,591	0/0:20,0:20:53.74:0,54,729	0/0:17,0:17:51.14:0,51,720	0/0:26,0:26:75.17:0,75,1042	0/0:19,0:19:51.17:0,51,781	1/1:1,18:21:63.22:1281,63,0	1/1:3,20:25:54.02:1120,54,0	1/1:2,10:12:24.08:501,24,0
chr10	4570705	.	A	ATGTG	930.41	PASS	AB=1.000;AC=14;AF=0.269;AN=52;BaseQRankSum=4.971;DP=694;FS=1.313;HRun=0;HaplotypeScore=150.1903;InbreedingCoeff=0.4602;MQ=59.60;MQ0=6;MQRankSum=-1.596;QD=4.01;ReadPosRankSum=-1.676;VQSLOD=2.6175;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:9.66:0,10,115	0/0:7,0:7:5.50:0,5,35	./.	./.	0/0:21,0:21:15.06:0,15,276	0/1:22,0:22:31.33:70,0,31	0/0:16,0:20:15.83:0,16,162	1/1:25,0:30:10.13:61,10,0	0/0:22,0:21:21.48:0,21,173	0/0:23,0:23:19.72:0,20,231	0/0:20,0:20:19.10:0,19,204	0/0:27,0:27:32.24:0,32,402	0/0:20,0:20:14.41:0,14,190	0/0:18,0:18:11.82:0,12,110	0/1:24,0:24:24.64:47,0,25	0/0:21,0:21:13.21:0,13,111	1/1:13,12:28:6.01:188,6,0	0/1:36,0:36:72.27:159,0,72	0/0:23,0:23:9.85:0,10,171	0/0:13,0:13:9.22:0,9,122	0/0:53,0:51:6.78:0,7,450	0/0:21,0:22:26.80:0,27,321	0/0:18,0:18:19.18:0,19,159	0/0:36,0:38:55.34:0,55,671	0/1:25,0:25:34.41:166,0,34	1/1:35,0:33:14.63:166,15,0	1/1:21,0:20:4.11:27,4,0	1/1:9,0:9:12.02:210,12,0
chr10	4571379	.	ACACACT	A	347.19	PASS	AB=0.932;AC=3;AF=0.054;AN=56;BaseQRankSum=4.717;DP=1281;FS=18.655;HRun=0;HaplotypeScore=254.2827;InbreedingCoeff=0.6197;MQ=56.71;MQ0=27;MQRankSum=-5.013;QD=7.23;ReadPosRankSum=-2.099;VQSLOD=0.3341;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,123,3867	0/0:26,0:26:72.19:0,72,2011	0/0:40,0:10:30.07:0,30,525	0/0:46,0:17:37.67:0,38,1113	0/0:29,0:29:84.26:0,84,2600	0/0:30,0:30:84.26:0,84,2714	0/0:30,0:30:78.25:0,78,2495	0/0:27,1:15:35.45:0,35,400	0/0:49,0:49:99:0,146,4381	0/0:62,0:61:99:0,127,4845	0/0:20,0:20:54.13:0,54,1539	0/0:70,0:68:99:0,184,5866	0/0:58,0:58:99:0,169,5460	0/0:43,0:42:99:0,114,3777	0/0:65,1:64:99:0,184,5940	0/0:67,0:67:99:0,187,6197	1/1:3,4:5:12.04:275,12,0	0/1:38,3:37:99:172,0,2744	0/0:31,0:29:81.22:0,81,2237	0/0:51,0:51:99:0,138,4160	0/0:77,2:75:99:0,132,5962	0/0:46,0:46:99:0,126,4155	0/0:42,0:42:99:0,114,3221	0/0:70,0:69:99:0,183,5800	0/0:35,0:35:99:0,99,2948	0/0:80,0:76:99:0,208,6668	0/0:71,0:69:99:0,208,6510	0/0:19,0:19:54.19:0,54,1845
chr10	4571420	.	TCA	T	1107.57	PASS	AB=0.637;AC=1;AF=0.018;AN=56;BaseQRankSum=7.069;DP=1294;FS=3.036;HRun=0;HaplotypeScore=149.3177;InbreedingCoeff=0.3497;MQ=53.88;MQ0=68;MQRankSum=-9.180;QD=19.10;ReadPosRankSum=-3.784;VQSLOD=3.0934;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:41:96.75:0,97,1564	0/0:15,0:15:36.12:0,36,610	0/0:48,0:4:2.85:0,3,40	0/0:48,0:6:5.73:0,6,35	0/0:31,0:30:78.08:0,78,1268	0/0:28,0:26:69.24:0,69,1179	0/0:37,0:35:72.20:0,72,1144	0/1:25,33:40:2.60:1182,0,3	0/0:52,0:51:99:0,117,1859	0/0:50,0:49:99:0,135,2108	0/0:24,0:24:63.18:0,63,1022	0/0:66,0:66:99:0,156,2441	0/0:63,0:63:99:0,169,2796	0/0:40,0:39:96.31:0,96,1605	0/0:63,0:61:99:0,159,2564	0/0:66,0:66:99:0,165,2679	0/0:28,0:21:42.60:0,43,664	0/0:36,1:35:28.89:0,29,1202	0/0:32,0:19:47.97:0,48,726	0/0:49,0:48:99:0,120,2014	0/0:84,0:78:99:0,180,2790	0/0:50,0:50:99:0,132,2155	0/0:32,0:32:93.26:0,93,1479	0/0:64,0:62:99:0,150,2353	0/0:30,0:29:60.17:0,60,968	0/0:73,0:68:99:0,181,2915	0/0:63,0:58:99:0,138,2199	0/0:18,0:18:45.08:0,45,704
chr10	4571499	.	TAC	T	1112.37	PASS	AB=0.748;AC=3;AF=0.058;AN=52;BaseQRankSum=7.246;DP=1337;FS=4.846;HRun=0;HaplotypeScore=182.3462;InbreedingCoeff=-0.0636;MQ=56.53;MQ0=64;MQRankSum=3.992;QD=5.70;ReadPosRankSum=1.179;VQSLOD=3.2069;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:44:75.56:0,76,1122	0/0:23,0:23:66.23:0,66,1089	0/0:56,0:15:39.10:0,39,555	0/0:48,0:23:46.98:0,47,716	0/0:37,0:35:81.05:0,81,1219	0/0:35,0:34:90.26:0,90,1404	0/0:39,0:35:99:0,99,1603	0/0:51,0:40:99:0,114,1395	0/0:65,0:64:99:0,168,2688	0/0:57,0:55:99:0,144,2224	0/0:32,1:32:43.76:0,44,1215	0/0:78,0:77:99:0,178,3045	0/0:59,0:59:99:0,156,2422	0/0:54,1:54:97.90:0,98,2018	0/1:69,31:98:99:555,0,2447	0/0:60,0:60:99:0,165,2575	0/0:57,0:49:99:0,120,1943	0/1:32,11:38:99:315,0,804	0/0:25,0:21:53.55:0,54,832	0/0:51,0:51:99:0,126,1995	0/0:90,5:88:99:0,109,3019	0/0:53,0:53:99:0,132,2100	0/0:38,0:38:90.27:0,90,1391	0/0:49,0:49:99:0,117,1889	0/1:28,23:51:99:341,0,1053	0/0:21,0:15:9.01:0,9,103	./.	./.
chr10	4571502	.	A	ACACACT	194.79	PASS	AB=0.771;AC=2;AF=0.038;AN=52;BaseQRankSum=7.481;DP=1343;FS=1.522;HRun=0;HaplotypeScore=285.4136;InbreedingCoeff=-0.0400;MQ=56.68;MQ0=55;MQRankSum=-3.633;QD=3.19;ReadPosRankSum=-3.427;VQSLOD=1.3120;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:44:71.44:0,71,1423	0/0:22,0:22:66.23:0,66,1508	0/0:49,0:15:39.01:0,39,817	0/0:46,0:24:32.99:0,33,894	0/0:37,0:35:93.23:0,93,1834	0/0:35,0:34:96.27:0,96,2008	0/0:40,0:36:99:0,105,2219	0/0:54,0:44:34.46:0,34,1455	0/0:66,0:65:99:0,177,3690	0/0:57,0:55:99:0,153,3004	0/0:32,0:32:90.25:0,90,1850	0/0:80,0:79:99:0,213,4375	0/0:62,0:62:99:0,168,3430	0/0:56,0:55:99:0,153,3060	0/0:105,0:102:99:0,261,4972	0/0:62,0:62:99:0,175,3683	0/0:55,0:48:99:0,123,2631	0/1:42,2:39:99:162,0,1646	0/0:29,0:22:60.18:0,60,1209	0/0:51,0:51:99:0,132,2768	0/0:90,3:85:99:0,107,4424	0/0:54,0:54:99:0,147,2943	0/0:39,0:39:99:0,111,2015	0/0:49,0:49:99:0,117,2588	0/0:52,0:52:99:0,117,2179	0/1:5,11:11:99:121,0,124	./.	./.
chr10	4571506	.	A	ACT	744.13	PASS	AB=0.868;AC=2;AF=0.038;AN=52;BaseQRankSum=-0.683;DP=1335;FS=0.782;HRun=0;HaplotypeScore=188.8236;InbreedingCoeff=-0.0400;MQ=56.96;MQ0=47;MQRankSum=-2.843;QD=11.27;ReadPosRankSum=-1.730;VQSLOD=3.1016;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:84.11:0,84,1080	0/0:23,0:23:69.22:0,69,1032	0/0:51,0:17:44.62:0,45,626	0/0:45,0:25:58.93:0,59,716	0/0:34,0:32:96.21:0,96,1313	0/0:34,0:34:99:0,99,1398	0/0:39,0:36:99:0,105,1518	0/1:34,19:45:99:791,0,1008	0/0:64,0:64:99:0,183,2547	0/0:53,0:52:99:0,153,2092	0/0:32,0:32:93.19:0,93,1286	0/0:80,0:79:99:0,222,3125	0/0:63,0:63:99:0,177,2432	0/0:54,0:53:99:0,156,2151	0/0:105,0:102:99:0,275,3303	0/0:66,0:66:99:0,192,2691	0/0:56,0:51:99:0,123,1771	0/0:46,0:41:52.38:0,52,1084	0/0:34,0:24:63.18:0,63,879	0/0:49,0:49:99:0,141,1973	0/0:93,0:85:99:0,211,3159	0/0:50,0:50:99:0,150,2062	0/0:39,0:39:99:0,114,1471	0/0:50,0:50:99:0,132,1861	0/0:52,0:52:99:0,120,1399	0/1:13,0:8:40.92:41,0,128	./.	./.
chr10	4571526	.	T	TAC	2361.36	PASS	AC=6;AF=0.111;AN=54;BaseQRankSum=-8.393;DP=1319;FS=2.241;HRun=0;HaplotypeScore=199.1378;InbreedingCoeff=0.9224;MQ=57.44;MQ0=27;MQRankSum=-2.923;QD=21.27;ReadPosRankSum=-4.255;VQSLOD=2.6651;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,36:45:71.83:1136,72,0	0/0:24,0:24:66.17:0,66,775	0/0:53,0:27:50.63:0,51,516	0/0:38,0:21:23.19:0,23,217	0/0:36,0:36:86.23:0,86,967	0/0:34,0:33:81.16:0,81,929	0/0:35,0:34:60.14:0,60,699	1/1:30,30:55:70.96:1333,71,0	0/0:64,0:64:99:0,103,1443	0/0:51,0:51:99:0,120,1394	0/0:33,0:33:78.63:0,79,1022	0/0:73,0:74:99:0,189,2218	0/0:59,0:64:99:0,150,1715	0/0:48,0:48:99:0,123,1499	0/0:120,0:119:99:0,291,3448	0/0:64,0:64:99:0,137,1778	0/0:48,0:45:61.26:0,61,895	0/0:51,0:46:99:0,102,1260	0/0:30,0:22:41.54:0,42,429	0/0:48,1:49:56.26:0,56,1146	0/0:96,1:92:99:0,190,2281	0/0:46,0:46:93.15:0,93,1085	0/0:32,0:32:69.18:0,69,813	0/0:46,0:47:87.24:0,87,1045	0/0:54,0:54:99:0,117,1399	0/0:7,0:4:12.04:0,12,148	1/1:6,0:1:2.99:24,3,0	./.
chr10	4571531	.	A	ACACACT	47.40	PASS	AB=0.991;AC=4;AF=0.074;AN=54;BaseQRankSum=6.486;DP=1281;FS=0.000;HRun=0;HaplotypeScore=298.5450;InbreedingCoeff=0.2707;MQ=55.94;MQ0=36;MQRankSum=-4.792;QD=0.45;ReadPosRankSum=-5.272;VQSLOD=1.1659;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:5.19:0,5,129	0/0:23,0:23:66.23:0,66,1499	0/0:51,0:24:50.34:0,50,1096	0/0:33,0:13:11.25:0,11,383	0/0:34,0:34:92.83:0,93,1946	0/0:34,0:33:93.26:0,93,1898	0/0:32,0:29:75.18:0,75,1498	0/1:56,0:51:25.58:26,0,427	0/0:61,0:61:99:0,151,3008	0/0:51,0:51:99:0,144,2924	0/0:33,0:33:96.28:0,96,2054	0/0:76,0:76:99:0,203,4304	0/0:63,0:63:99:0,171,3423	0/0:45,0:45:99:0,126,2828	0/0:119,0:117:99:0,307,6734	0/0:66,0:66:99:0,172,3603	0/1:43,0:40:19.36:19,0,1721	0/0:52,2:49:10.76:0,11,2337	0/0:31,0:21:45.15:0,45,911	0/0:48,0:45:99:0,123,2435	0/0:99,3:93:99:0,213,4538	0/0:41,0:41:99:0,114,2237	0/0:31,0:31:84.20:0,84,1654	0/0:42,0:42:99:0,102,2090	0/0:55,0:55:99:0,126,2702	0/0:5,1:4:12.04:0,12,277	1/1:2,2:1:3.01:104,3,0	./.
chr10	4571635	.	T	TACACAC	822.62	PASS	AB=0.792;AC=12;AF=0.231;AN=52;BaseQRankSum=2.896;DP=936;FS=5.782;HRun=0;HaplotypeScore=215.6687;InbreedingCoeff=0.7314;MQ=56.51;MQ0=9;MQRankSum=0.025;QD=9.35;ReadPosRankSum=-6.046;VQSLOD=0.2339;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:2,1:3:18.41:19,0,18	0/0:20,0:19:42.09:0,42,825	0/0:38,0:18:38.87:0,39,769	0/0:44,0:30:51.09:0,51,996	0/0:31,0:31:72.25:0,72,1489	0/0:34,0:33:81.06:0,81,1642	0/0:29,0:29:69.22:0,69,1468	1/1:5,2:8:12.03:221,12,0	0/0:55,0:55:99:0,124,2943	0/0:50,0:50:99:0,120,2563	0/0:40,0:40:99:0,117,2435	0/0:57,0:57:99:0,146,2985	0/0:53,0:53:99:0,129,2673	0/0:36,0:36:99:0,108,2286	1/1:18,0:18:24.03:284,24,0	0/0:49,0:49:99:0,114,2377	1/1:11,0:32:9:176,9,0	0/1:8,0:9:28.95:54,0,29	0/0:27,0:24:57.15:0,57,1129	0/0:54,0:54:88.44:0,88,2656	0/0:83,0:80:99:0,189,3898	0/0:43,0:43:99:0,111,2216	0/0:43,0:43:99:0,107,2269	0/0:60,0:60:99:0,121,2864	1/1:8,0:8:12.04:194,12,0	./.	1/1:4,0:4:5.80:41,6,0	./.
chr10	4571636	.	A	ACACACACACT	650.29	PASS	AB=1.000;AC=10;AF=0.192;AN=52;BaseQRankSum=5.229;DP=941;FS=0.887;HRun=0;HaplotypeScore=296.9041;InbreedingCoeff=0.7106;MQ=56.42;MQ0=11;MQRankSum=-1.985;QD=7.65;ReadPosRankSum=-5.135;VQSLOD=1.1345;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:5:2.80:0,3,14	0/0:19,0:18:45.14:0,45,1211	0/0:37,0:18:38.62:0,39,1027	0/0:44,0:30:54.13:0,54,1351	0/0:30,0:30:75.24:0,75,2149	0/0:34,0:33:90.24:0,90,2384	0/0:29,0:29:72.23:0,72,2072	1/1:8,0:8:7.76:76,8,0	0/0:56,0:56:99:0,137,4241	0/0:53,0:51:99:0,123,3688	0/0:40,0:40:99:0,117,3435	0/0:57,0:57:99:0,149,4365	0/0:54,0:54:99:0,132,3836	0/0:36,0:36:99:0,108,3264	0/1:18,0:18:33.93:34,0,36	0/0:50,0:50:99:0,120,3472	1/1:28,7:31:10.88:435,11,0	0/1:11,0:10:1.82:2,0,64	0/0:27,0:24:63.20:0,63,1760	0/0:53,0:53:99:0,133,3837	0/0:83,0:79:99:0,194,5609	0/0:44,0:43:99:0,114,3243	0/0:44,0:44:99:0,123,3342	0/0:61,0:60:99:0,145,4100	1/1:9,0:8:11.98:98,12,0	./.	1/1:4,0:4:12.01:153,12,0	./.
chr10	4573341	.	TGC	T	1253.78	PASS	AB=0.872;AC=13;AF=0.232;AN=56;BaseQRankSum=10.411;DP=555;FS=18.803;HRun=0;HaplotypeScore=79.8265;InbreedingCoeff=0.1753;MQ=52.75;MQ0=19;MQRankSum=0.842;QD=6.43;ReadPosRankSum=-1.419;VQSLOD=1.4049;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:5,20:23:36.79:238,0,37	0/0:3,0:3:9:0,9,91	1/1:7,0:2:0.47:1,0,0	0/0:14,0:1:3.01:0,3,32	0/0:12,0:12:29.64:0,30,277	0/0:15,0:15:1.27:0,1,385	0/0:36,0:34:43.40:0,43,1033	0/1:16,0:14:38.50:39,0,54	0/0:33,0:33:76.74:0,77,1066	0/1:17,0:17:14.74:15,0,305	0/0:8,0:8:21.06:0,21,287	0/0:15,0:14:8.46:0,8,373	0/0:13,0:13:25.73:0,26,387	0/0:28,0:27:58.34:0,58,869	0/1:18,0:18:6.59:55,0,7	0/0:18,0:18:48.03:0,48,579	0/1:8,35:41:20.49:621,0,20	1/1:29,0:28:48.35:310,48,0	0/0:14,0:11:7.45:0,7,133	0/0:8,0:8:21.05:0,21,276	0/0:58,0:54:33.03:0,33,1231	0/0:9,0:9:20.05:0,20,182	0/0:12,0:11:23.95:0,24,226	0/0:47,0:47:81.78:0,82,1374	1/1:15,0:15:4.49:106,4,0	0/0:17,0:17:12.24:0,12,416	0/1:13,0:11:0.37:0,0,118	0/1:12,0:12:13.84:14,0,222
chr10	4573369	.	TG	T	325.79	PASS	AB=0.939;AC=7;AF=0.125;AN=56;BaseQRankSum=7.152;DP=681;FS=3.071;HRun=2;HaplotypeScore=79.4820;InbreedingCoeff=0.1373;MQ=50.96;MQ0=43;MQRankSum=-4.759;QD=2.96;ReadPosRankSum=-1.768;VQSLOD=-0.5883;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:28:40.17:0,40,410	0/0:7,0:7:20.74:0,21,264	0/0:54,1:4:6.18:0,6,114	0/0:59,0:4:6.02:0,6,76	0/0:10,0:10:22.62:0,23,296	0/0:17,0:17:47.37:0,47,650	0/0:31,0:29:84.90:0,85,1078	0/1:12,5:15:99:178,0,123	0/0:36,0:35:87.10:0,87,1150	0/0:16,0:16:43.21:0,43,516	0/0:11,0:11:31.35:0,31,432	0/0:21,1:22:51.97:0,52,703	0/0:13,0:13:35.33:0,35,471	0/0:22,0:22:63.15:0,63,833	0/1:21,1:21:6.91:7,0,42	0/0:21,0:21:57.11:0,57,756	0/0:46,0:44:81.62:0,82,901	0/1:26,1:26:46.74:169,0,47	0/0:12,0:9:25.68:0,26,295	0/0:11,0:11:27.08:0,27,384	0/0:52,1:50:99:0,124,1679	0/0:12,0:11:24.08:0,24,330	0/0:16,0:15:26.61:0,27,379	0/0:55,0:55:74.01:0,74,1793	1/1:15,3:18:6.90:78,7,0	0/1:16,0:16:2.22:2,0,155	0/1:10,0:8:9.38:9,0,24	0/0:16,0:16:3.76:0,4,19
chr10	4573370	.	G	GGT	256.94	PASS	AB=0.583;AC=5;AF=0.089;AN=56;BaseQRankSum=6.265;DP=682;FS=3.567;HRun=0;HaplotypeScore=89.7225;InbreedingCoeff=0.5548;MQ=50.96;MQ0=44;MQRankSum=-2.865;QD=3.78;ReadPosRankSum=0.209;VQSLOD=2.1363;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:28:29.63:0,30,271	0/0:7,0:7:17.99:0,18,188	0/0:59,0:4:8.91:0,9,87	0/0:59,0:4:1.55:0,2,4	0/0:10,0:10:17.88:0,18,180	0/0:17,0:17:42.11:0,42,487	0/0:31,0:29:63.12:0,63,704	0/0:15,0:13:6.99:0,7,33	0/0:35,0:35:77.68:0,78,903	0/0:15,0:16:26.82:0,27,299	0/0:11,0:11:26.90:0,27,285	0/0:21,0:21:50.94:0,51,564	0/0:13,0:13:33.09:0,33,390	0/0:22,0:22:47.16:0,47,540	0/1:6,12:20:16.96:99,0,17	0/0:21,0:21:45.10:0,45,528	0/0:45,0:43:36:0,36,591	1/1:13,9:28:20.51:262,21,0	0/0:12,0:9:20.77:0,21,232	0/0:12,0:12:24.07:0,24,292	0/0:53,0:50:94.93:0,95,1272	0/0:12,0:11:18.05:0,18,218	0/0:16,0:15:27.08:0,27,325	0/0:55,0:55:70.01:0,70,1422	1/1:5,10:18:0.47:1,0,0	0/0:15,0:15:33.78:0,34,256	0/0:9,0:8:9.01:0,9,92	0/0:13,0:16:43.05:0,43,319
chr10	4574152	.	T	TC	848.29	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-5.505;DP=642;FS=3.957;HRun=4;HaplotypeScore=66.6347;InbreedingCoeff=0.9976;MQ=86.26;MQ0=0;MQRankSum=-3.580;QD=25.71;ReadPosRankSum=-2.840;VQSLOD=1.7229;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:1,32:33:69.23:943,69,0	0/0:18,0:18:42.12:0,42,476	0/0:15,0:15:24.10:0,24,353	0/0:28,0:28:65.48:0,65,664	0/0:28,0:28:66.15:0,66,735	0/0:23,0:23:57.16:0,57,640	0/0:26,0:26:72.17:0,72,797	0/0:30,0:30:69.13:0,69,752	0/0:25,0:25:75.21:0,75,850	0/0:16,0:16:33.09:0,33,374	0/0:16,0:16:45.12:0,45,502	0/0:19,0:19:48.13:0,48,544	0/0:24,0:24:57.16:0,57,646	0/0:17,0:17:48.14:0,48,544	0/0:30,0:30:84.22:0,84,941	0/0:23,0:23:69.18:0,69,773	0/0:18,0:18:54.15:0,54,612	0/0:21,0:21:60.14:0,60,666	0/0:20,0:20:54.14:0,54,605	0/0:27,0:27:66.14:0,66,724	0/0:29,0:29:75.01:0,75,815	0/0:16,0:16:42.12:0,42,475	0/0:23,0:23:61.01:0,61,658	0/0:25,1:26:66.19:0,66,748	0/0:26,0:25:72.16:0,72,802	0/0:31,0:31:78.19:0,78,870	0/0:18,0:18:51.11:0,51,558	0/0:16,0:16:42.10:0,42,465
chr10	4574667	.	AAC	A	284.34	PASS	AB=0.923;AC=16;AF=0.286;AN=56;BaseQRankSum=2.252;DP=601;FS=2.254;HRun=0;HaplotypeScore=93.9639;InbreedingCoeff=0.0607;MQ=72.98;MQ0=6;MQRankSum=1.554;QD=1.03;ReadPosRankSum=1.641;VQSLOD=1.8504;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:38:5.68:28,6,0	1/1:7,2:9:2.81:32,3,0	0/1:33,0:21:0:0,0,0	0/0:36,0:29:0.47:0,0,1	0/1:12,1:14:28.62:29,0,137	0/0:11,0:13:8.02:0,8,54	0/1:27,2:30:31.93:32,0,279	0/0:21,0:21:6.02:0,6,77	0/1:18,0:16:3.30:3,0,57	0/1:13,3:16:43.92:44,0,202	0/0:12,0:12:3.01:0,3,45	0/1:23,1:24:17.96:18,0,129	0/1:15,3:18:17.47:17,0,160	0/0:15,0:15:20.78:0,21,256	0/0:9,0:22:14.92:0,15,117	0/1:18,5:23:52.15:52,0,78	1/1:16,3:20:17.71:157,18,0	0/0:18,0:25:9.90:0,10,106	0/0:17,0:17:3.01:0,3,45	0/1:14,1:15:14.46:14,0,196	0/0:39,0:38:29.75:0,30,384	0/1:18,0:18:8.94:9,0,201	0/0:15,0:15:21.01:0,21,220	0/0:32,2:34:3.56:0,4,380	0/0:18,0:23:15.35:0,15,115	0/0:23,0:26:32.82:0,33,286	0/0:11,0:15:15.02:0,15,168	0/0:7,0:8:20.95:0,21,206
chr10	4574787	.	TCCAATACCACTTAAG	T	4682.68	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.697;DP=764;FS=16.311;HRun=0;HaplotypeScore=309.5942;InbreedingCoeff=0.9344;MQ=83.51;MQ0=0;MQRankSum=-9.594;QD=106.42;ReadPosRankSum=3.234;VQSLOD=3.6081;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,117,8275	0/0:12,0:12:36.12:0,36,2565	0/0:26,0:26:69.22:0,69,3355	0/0:31,0:31:87.30:0,87,5419	0/0:23,0:23:66.23:0,66,4716	0/0:19,0:19:54.19:0,54,3873	0/0:46,0:46:99:0,135,9601	0/0:22,0:22:60.21:0,60,3936	0/0:18,0:17:48.16:0,48,3430	0/0:34,0:34:96.32:0,96,6002	0/0:11,0:11:33.11:0,33,2302	0/0:43,0:43:99:0,126,8817	0/0:19,0:19:54.19:0,54,3941	0/0:33,0:33:96.33:0,96,6657	0/0:36,0:36:99:0,105,7487	0/0:26,0:25:78.27:0,78,5596	0/0:41,0:41:99:0,120,8381	0/0:25,0:25:69.24:0,69,4869	0/0:18,0:18:54.19:0,54,3379	0/0:16,0:16:48.16:0,48,3253	0/0:84,0:84:99:0,234,15955	0/0:26,0:26:78.27:0,78,5516	0/0:16,0:16:48.16:0,48,3331	0/0:33,0:33:93.30:0,93,6434	0/0:21,0:21:57.20:0,57,3954	1/1:4,15:19:45.15:2007,45,0	1/1:1,19:20:57.20:2542,57,0	1/1:2,3:5:3.01:133,3,0
chr10	4577659	.	GA	G	823.22	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.721;DP=651;FS=2.363;HRun=7;HaplotypeScore=62.0238;InbreedingCoeff=0.9820;MQ=68.28;MQ0=0;MQRankSum=-3.667;QD=22.25;ReadPosRankSum=1.562;VQSLOD=3.5826;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,32:37:90.20:918,90,0	0/0:9,0:9:27.09:0,27,340	0/0:20,0:17:44.67:0,45,498	0/0:11,0:10:25.89:0,26,297	0/0:24,0:24:66.18:0,66,792	0/0:26,0:26:75.24:0,75,943	0/0:27,0:27:75.24:0,75,944	0/0:34,0:34:93.20:0,93,1122	0/0:26,0:26:75.24:0,75,944	0/0:25,0:25:72.23:0,72,905	0/0:24,0:24:66.21:0,66,830	0/0:24,0:24:69.22:0,69,865	0/0:26,0:26:75.23:0,75,931	0/0:22,0:22:60.19:0,60,755	0/0:30,0:30:87.27:0,87,1082	0/0:18,0:18:51.15:0,51,619	0/0:21,0:21:60.19:0,60,754	0/0:25,0:25:63.20:0,63,791	0/0:15,0:15:36.12:0,36,453	0/0:24,0:24:69.22:0,69,868	0/0:14,0:14:42.12:0,42,516	0/0:29,0:29:78.24:0,78,970	0/0:29,0:29:75.24:0,75,939	0/0:19,0:19:53.86:0,54,667	0/0:26,0:26:66.20:0,66,819	0/0:24,0:24:63.20:0,63,793	0/0:37,0:36:99:0,108,1346	0/0:5,0:5:15.05:0,15,187
chr10	4580735	.	TCTCTTCCTCCTCCTCCTCCTCCTC	T	2387.52	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=6.432;DP=550;FS=1.435;HRun=0;HaplotypeScore=254.6823;InbreedingCoeff=0.3589;MQ=46.78;MQ0=35;MQRankSum=-2.795;QD=17.82;ReadPosRankSum=0.043;VQSLOD=2.0458;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:20:1.33:1,0,1638	0/0:6,0:5:8.88:0,9,317	0/0:42,0:9:14.01:0,14,138	0/0:43,0:6:11.48:0,11,84	0/0:12,0:12:26.49:0,26,920	0/0:22,0:21:57.02:0,57,1758	0/0:23,0:21:57.03:0,57,2664	0/1:21,0:17:99:107,0,185	0/0:16,0:15:45.14:0,45,2427	0/0:22,0:22:66.18:0,66,3012	0/0:8,0:7:17.96:0,18,608	0/0:22,0:21:63.18:0,63,3278	0/0:17,0:17:45.06:0,45,2164	0/0:12,0:11:27.08:0,27,1486	0/0:22,0:22:57.20:0,57,2209	0/0:17,0:17:48.15:0,48,2327	0/1:13,0:10:2.56:3,0,17	0/1:12,0:12:24.22:24,0,716	0/0:17,0:15:36.09:0,36,1961	0/0:13,0:13:38.83:0,39,1595	0/0:16,0:14:36.12:0,36,2170	0/0:26,0:25:69.22:0,69,3742	0/0:20,0:19:47.61:0,48,1627	0/0:18,0:15:33.07:0,33,1567	0/0:21,0:20:39.13:0,39,1378	1/1:5,20:22:44.71:1650,45,0	1/1:1,16:17:9.03:587,9,0	0/1:21,0:12:99:154,0,106
chr10	4580739	.	TTCCTCC	T	1528.15	PASS	AB=0.845;AC=10;AF=0.208;AN=48;BaseQRankSum=5.327;DP=521;FS=16.387;HRun=0;HaplotypeScore=108.1632;InbreedingCoeff=0.6474;MQ=47.61;MQ0=35;MQRankSum=-7.393;QD=13.29;ReadPosRankSum=0.935;VQSLOD=1.5879;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:21:15.51:0,16,276	0/0:4,0:3:3.01:0,3,94	./.	0/0:40,0:6:0.47:0,0,1	0/0:11,0:11:9.03:0,9,284	0/0:23,0:22:9.03:0,9,251	0/0:23,0:21:26.86:0,27,645	./.	0/0:17,0:16:24.08:0,24,716	0/0:22,0:22:24.08:0,24,766	0/0:10,0:9:9.03:0,9,174	0/0:23,0:22:33.08:0,33,794	0/0:18,0:18:24.08:0,24,552	0/0:12,0:11:12.04:0,12,332	1/1:7,15:23:39.13:761,39,0	0/0:17,0:17:18.06:0,18,536	./.	1/1:8,4:12:6.02:123,6,0	0/0:14,0:11:12.04:0,12,391	0/0:15,0:15:21.06:0,21,558	0/0:14,0:12:21.07:0,21,638	0/0:27,0:27:33.58:0,34,992	0/1:11,0:19:33.97:34,0,104	0/0:13,0:15:17.79:0,18,177	1/1:10,12:20:24.08:462,24,0	0/1:22,0:19:2.08:173,0,2	1/1:16,0:16:9.03:125,9,0	./.
chr10	4581843	.	GAGA	G	760.57	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.879;DP=675;FS=9.524;HRun=0;HaplotypeScore=98.9466;InbreedingCoeff=0.9822;MQ=74.25;MQ0=0;MQRankSum=-2.590;QD=38.03;ReadPosRankSum=-3.273;VQSLOD=3.5808;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,126,2638	0/0:10,0:10:24.08:0,24,514	0/0:28,0:26:60.14:0,60,1175	0/0:37,0:34:75.46:0,75,1385	0/0:20,0:20:57.20:0,57,1204	0/0:22,0:22:58.62:0,59,1326	0/0:26,0:27:72.72:0,73,1562	1/1:0,20:20:57.15:855,57,0	0/0:31,0:31:87.30:0,87,1912	0/0:24,0:24:63.22:0,63,1389	0/0:17,0:17:45.11:0,45,906	0/0:29,0:29:84.27:0,84,1752	0/0:21,0:21:51.17:0,51,1105	0/0:35,0:35:99:0,102,2125	0/0:30,0:30:87.30:0,87,1900	0/0:31,0:31:84.29:0,84,1825	0/0:25,0:25:69.23:0,69,1434	0/0:20,0:20:48.16:0,48,1023	0/0:16,0:16:39.13:0,39,812	0/0:17,0:17:48.16:0,48,1026	0/0:24,0:24:72.23:0,72,1519	0/0:12,0:12:33.11:0,33,710	0/0:29,0:29:87.28:0,87,1856	0/0:22,0:22:63.19:0,63,1332	0/0:25,0:25:72.25:0,72,1563	0/0:26,0:26:78.27:0,78,1706	0/0:28,0:28:78.27:0,78,1689	0/0:5,0:5:15.05:0,15,331
chr10	4582470	.	ATG	A	381.56	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.928;DP=565;FS=5.739;HRun=0;HaplotypeScore=74.7075;InbreedingCoeff=0.9953;MQ=81.96;MQ0=0;MQRankSum=-6.398;QD=18.17;ReadPosRankSum=-2.719;VQSLOD=2.5132;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,111,2129	0/0:8,0:8:24.08:0,24,460	0/0:21,0:21:57.19:0,57,1058	0/0:21,0:20:53.02:0,53,905	0/0:22,0:22:66.23:0,66,1265	0/0:19,0:19:57.16:0,57,1016	0/0:24,0:24:72.25:0,72,1390	1/1:3,18:21:51.05:476,51,0	0/0:15,0:15:45.15:0,45,863	0/0:18,0:18:51.16:0,51,949	0/0:17,0:17:48.16:0,48,904	0/0:25,0:25:75.26:0,75,1448	0/0:13,0:13:36.12:0,36,695	0/0:19,0:19:57.18:0,57,1056	0/0:33,0:33:96.33:0,96,1844	0/0:20,0:20:54.19:0,54,1032	0/0:34,0:34:93.15:0,93,916	0/0:19,0:19:57.20:0,57,1083	0/0:18,0:18:54.19:0,54,1043	0/0:18,0:18:54.19:0,54,1042	0/0:21,0:21:63.22:0,63,1217	0/0:10,0:10:30.10:0,30,579	0/0:20,0:20:60.21:0,60,1156	0/0:15,0:15:45.15:0,45,858	0/0:15,0:15:42.11:0,42,774	0/0:24,0:24:69.16:0,69,1244	0/0:28,0:28:81.24:0,81,1496	0/0:8,0:8:24.08:0,24,463
chr10	4582474	.	ATT	A	471.01	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.516;DP=560;FS=7.041;HRun=2;HaplotypeScore=75.1222;InbreedingCoeff=0.9976;MQ=82.97;MQ0=0;MQRankSum=-6.314;QD=22.43;ReadPosRankSum=-3.539;VQSLOD=0.3598;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,111,2246	0/0:10,0:10:30.05:0,30,531	0/0:21,0:21:57.19:0,57,1073	0/0:22,1:22:37.56:0,38,1054	0/0:22,0:22:66.23:0,66,1328	0/0:17,0:17:51.18:0,51,1034	0/0:26,0:26:78.25:0,78,1536	1/1:3,18:21:56.80:566,57,0	0/0:15,0:15:45.15:0,45,914	0/0:18,0:18:54.19:0,54,1086	0/0:17,0:17:51.16:0,51,976	0/0:26,0:26:78.27:0,78,1564	0/0:12,0:12:36.12:0,36,731	0/0:18,0:18:54.19:0,54,1097	0/0:31,0:31:93.32:0,93,1875	0/0:19,0:19:54.19:0,54,1096	0/0:33,0:33:93.32:0,93,1880	0/0:19,0:19:57.20:0,57,1153	0/0:19,0:19:54.18:0,54,1066	0/0:19,0:19:57.20:0,57,1146	0/0:21,0:21:63.22:0,63,1280	0/0:10,0:10:30.10:0,30,609	0/0:20,0:20:60.21:0,60,1211	0/0:14,0:14:42.14:0,42,853	0/0:14,0:14:39.13:0,39,792	0/0:22,0:22:66.22:0,66,1294	0/0:27,0:27:78.20:0,78,1541	0/0:9,0:9:27.09:0,27,523
chr10	4582538	.	TTTTAA	T	2106.22	PASS	AB=1.000;AC=13;AF=0.260;AN=50;BaseQRankSum=8.746;DP=434;FS=11.740;HRun=0;HaplotypeScore=82.0981;InbreedingCoeff=0.6888;MQ=68.14;MQ0=11;MQRankSum=-3.217;QD=10.97;ReadPosRankSum=0.199;VQSLOD=1.5722;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:11,28:38:66.23:1196,66,0	0/0:5,0:5:6.02:0,6,135	0/0:29,0:10:5.90:0,6,29	0/1:67,0:21:3.42:3,0,12	0/0:15,0:15:12.04:0,12,338	0/0:18,0:18:36.12:0,36,1012	0/0:10,0:10:9.03:0,9,251	1/1:19,8:27:24.07:383,24,0	0/0:4,0:4:3.01:0,3,53	0/0:12,0:12:12.04:0,12,336	0/0:13,0:13:9.02:0,9,195	0/0:14,0:14:12.04:0,12,296	0/0:7,0:7:6.02:0,6,169	0/0:11,0:11:15.05:0,15,422	0/0:13,0:13:9.03:0,9,253	0/0:15,0:15:3.01:0,3,84	1/1:9,0:19:18.05:209,18,0	0/0:19,0:19:45.15:0,45,1242	0/0:22,0:20:27.09:0,27,739	./.	./.	./.	0/0:10,0:10:9.03:0,9,253	0/0:6,0:6:6.02:0,6,162	0/0:7,0:7:12.04:0,12,337	1/1:6,0:15:24.05:267,24,0	1/1:12,0:16:18.03:184,18,0	1/1:5,0:8:3.01:30,3,0
chr10	4582741	.	A	AC	452.94	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=2.671;DP=366;FS=11.140;HRun=7;HaplotypeScore=44.1495;InbreedingCoeff=0.7657;MQ=76.58;MQ0=0;MQRankSum=-2.690;QD=11.32;ReadPosRankSum=-1.895;VQSLOD=0.5091;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:4.41:0,4,19	0/0:7,0:7:21.01:0,21,196	0/0:11,0:11:14.77:0,15,151	0/0:10,0:10:23.97:0,24,215	0/0:17,0:17:36.05:0,36,347	0/0:16,0:16:42.03:0,42,398	0/0:22,0:22:57.07:0,57,544	1/1:3,0:11:16.76:90,17,0	0/0:17,0:17:51.08:0,51,492	0/0:13,0:13:33.05:0,33,319	0/0:10,0:10:21.03:0,21,203	0/0:17,0:17:51.05:0,51,484	0/0:14,0:14:42.07:0,42,405	0/0:13,0:13:36.06:0,36,347	0/0:12,0:12:30.05:0,30,290	0/0:18,0:19:53.11:0,53,498	1/1:3,16:19:36.11:435,36,0	0/0:24,0:24:60.09:0,60,578	0/0:20,0:20:42.02:0,42,404	0/0:5,0:5:9.01:0,9,87	0/0:16,0:16:39.06:0,39,377	0/0:13,0:13:38.98:0,39,360	0/0:8,0:8:21.01:0,21,196	0/0:14,0:14:33.05:0,33,318	0/0:12,0:12:30.05:0,30,290	0/1:3,0:3:8.21:8,0,23	1/1:5,0:5:10.25:54,10,0	1/1:2,0:2:2.84:14,3,0
chr10	4582743	.	C	CCCCCCCCG	632.74	PASS	AB=0.600;AC=7;AF=0.125;AN=56;BaseQRankSum=1.677;DP=364;FS=7.500;HRun=0;HaplotypeScore=96.9566;InbreedingCoeff=0.7202;MQ=77.68;MQ0=0;MQRankSum=-1.055;QD=25.31;ReadPosRankSum=-2.748;VQSLOD=1.9896;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:9.41:0,9,163	0/0:7,0:7:21.07:0,21,515	0/0:12,0:12:14.75:0,15,431	0/0:10,0:10:29.82:0,30,462	0/0:17,0:17:36.11:0,36,908	0/0:15,0:15:45.08:0,45,1058	0/0:23,0:23:63.20:0,63,1531	1/1:12,0:12:16.68:159,17,0	0/0:18,0:18:54.17:0,54,1354	0/0:13,0:13:33.11:0,33,858	0/0:10,0:10:24.06:0,24,572	0/0:17,0:17:51.17:0,51,1267	0/0:14,0:14:42.14:0,42,1093	0/0:13,0:13:36.12:0,36,901	0/0:11,0:11:30.10:0,30,781	0/0:19,0:19:57.19:0,57,1336	0/0:17,0:17:35.59:0,36,393	0/0:24,0:24:63.20:0,63,1519	0/0:19,0:19:47.17:0,47,1001	0/0:3,0:3:9.03:0,9,234	0/0:15,0:15:39.13:0,39,1014	0/0:13,0:13:39.12:0,39,934	0/0:8,0:8:21.07:0,21,514	0/0:13,0:13:36.11:0,36,840	0/0:12,0:12:33.10:0,33,801	0/1:2,1:6:69.10:142,0,69	1/1:3,2:5:12.04:339,12,0	1/1:0,1:2:3.01:128,3,0
chr10	4583090	.	TG	T	268.42	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.923;DP=670;FS=1.263;HRun=3;HaplotypeScore=114.6738;InbreedingCoeff=0.9674;MQ=71.98;MQ0=4;MQRankSum=-8.045;QD=6.39;ReadPosRankSum=-0.195;VQSLOD=0.3506;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,106,1420	0/0:6,0:6:18.02:0,18,204	0/0:44,0:19:41.52:0,42,599	0/0:45,0:26:55.65:0,56,640	0/0:36,0:36:98.14:0,98,1236	0/0:23,0:22:63.20:0,63,883	0/0:31,0:31:90.19:0,90,1174	0/0:30,0:30:90.21:0,90,1167	0/0:19,0:19:48.15:0,48,663	0/0:25,0:25:75.22:0,75,1008	0/0:14,0:14:40.26:0,40,496	0/0:28,0:28:81.27:0,81,1156	0/0:16,0:16:45.15:0,45,642	0/0:22,0:22:45.24:0,45,799	0/0:28,0:27:63.55:0,64,842	0/0:26,0:26:78.24:0,78,1080	0/0:25,0:25:33.88:0,34,668	0/0:22,0:22:35.65:0,36,439	0/0:25,0:24:52.17:0,52,725	0/0:13,0:13:39.11:0,39,537	0/0:26,0:25:75.12:0,75,971	0/0:13,0:13:39.11:0,39,523	0/0:24,0:24:66.20:0,66,922	0/0:29,0:29:87.20:0,87,1154	0/0:18,0:18:42.06:0,42,493	1/1:15,1:16:30.92:143,31,0	1/1:19,4:23:45.60:223,46,0	1/1:3,0:3:7.41:39,7,0
chr10	4583092	.	G	GT	1098.28	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.735;DP=671;FS=7.497;HRun=0;HaplotypeScore=115.0145;InbreedingCoeff=0.9550;MQ=71.85;MQ0=5;MQRankSum=-8.016;QD=26.15;ReadPosRankSum=0.726;VQSLOD=3.6251;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,108,1464	0/0:7,0:7:21.06:0,21,275	0/0:45,0:19:42.10:0,42,597	0/0:45,0:26:57.77:0,58,699	0/0:34,0:34:99:0,99,1353	0/0:23,0:22:66.21:0,66,906	0/0:31,0:31:92.29:0,92,1215	0/0:30,0:30:90.28:0,90,1237	0/0:18,0:18:51.15:0,51,691	0/0:25,0:25:75.25:0,75,1031	0/0:16,0:16:45.14:0,45,603	0/0:28,0:28:84.26:0,84,1154	0/0:15,0:15:45.15:0,45,628	0/0:21,0:21:63.19:0,63,843	0/0:26,0:25:74.95:0,75,973	0/0:26,0:26:78.26:0,78,1090	0/0:24,0:24:52.57:0,53,777	0/0:22,0:22:36.12:0,36,496	0/0:24,0:23:66.18:0,66,843	0/0:14,0:14:39.13:0,39,544	0/0:27,0:26:75.23:0,75,1017	0/0:14,0:14:39.11:0,39,527	0/0:23,0:23:66.22:0,66,919	0/0:31,0:31:86.85:0,87,1149	0/0:19,0:19:42.13:0,42,566	1/1:8,9:16:38.08:420,38,0	1/1:6,16:22:64.07:741,64,0	1/1:1,2:3:5.38:72,5,0
chr10	4583097	.	TG	T	423.92	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=10.838;DP=661;FS=1.104;HRun=1;HaplotypeScore=115.6112;InbreedingCoeff=0.8586;MQ=68.13;MQ0=5;MQRankSum=-8.058;QD=9.42;ReadPosRankSum=-1.501;VQSLOD=0.7719;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,117,1291	0/0:5,0:5:15.05:0,15,219	0/0:48,1:21:33.50:0,33,533	0/0:44,0:23:42.52:0,43,538	0/0:33,0:33:96.22:0,96,1341	0/0:22,0:21:63.18:0,63,877	0/0:29,0:29:87.26:0,87,1226	0/0:30,0:30:70.95:0,71,663	0/0:18,0:18:51.15:0,51,723	0/0:23,0:23:69.20:0,69,940	0/0:15,0:15:44.97:0,45,587	0/0:30,0:30:90.01:0,90,1211	0/0:16,0:16:48.14:0,48,674	0/0:19,0:19:57.10:0,57,752	0/0:23,4:26:0.82:0,1,271	0/0:28,0:28:84.13:0,84,1179	0/0:20,2:22:10.91:0,11,351	0/0:23,1:24:25.33:0,25,151	0/0:24,0:23:54.59:0,55,853	0/0:13,0:13:39.06:0,39,506	0/0:25,0:24:72.23:0,72,1028	0/0:13,0:13:39.13:0,39,566	0/0:23,0:23:66.18:0,66,903	0/0:28,0:28:84.26:0,84,1187	0/0:15,0:15:20.79:0,21,194	1/1:19,0:19:42.15:231,42,0	1/1:18,4:22:58.50:304,58,0	1/1:2,0:2:5.36:22,5,0
chr10	4583100	.	TTTG	T	1368.82	PASS	AB=1.000;AC=12;AF=0.214;AN=56;BaseQRankSum=6.727;DP=668;FS=5.536;HRun=0;HaplotypeScore=136.8871;InbreedingCoeff=0.5632;MQ=66.23;MQ0=5;MQRankSum=-0.536;QD=6.71;ReadPosRankSum=-3.704;VQSLOD=1.7324;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:41,0:41:83.16:83,0,138	0/0:6,0:6:18.05:0,18,328	0/0:54,0:22:26.42:0,26,412	0/0:47,0:23:37.50:0,38,394	0/0:34,0:34:99:0,99,1671	0/0:21,0:20:57.19:0,57,1077	0/0:29,0:29:84.21:0,84,1515	1/1:27,1:28:9.77:361,10,0	0/0:18,0:18:51.13:0,51,915	0/0:21,0:21:63.19:0,63,1064	0/0:14,0:14:42.13:0,42,788	0/0:30,0:30:87.27:0,87,1593	0/0:16,0:16:45.13:0,45,820	0/0:19,0:19:54.07:0,54,813	1/1:25,2:26:50.85:481,51,0	0/0:29,0:29:84.27:0,84,1583	0/1:23,0:23:21.72:22,0,205	1/1:23,1:24:29.67:204,30,0	0/0:25,0:24:65.17:0,65,1103	0/0:11,0:11:33.05:0,33,497	0/0:25,0:24:69.09:0,69,1052	0/0:13,0:13:36.11:0,36,719	0/0:22,0:22:63.19:0,63,1147	0/0:28,0:28:81.25:0,81,1526	1/1:15,1:16:27.06:204,27,0	0/1:21,0:19:5.41:5,0,249	0/1:24,0:24:99:179,0,252	0/0:2,0:2:5.88:0,6,35
chr10	4583101	.	TTG	T	2355.45	PASS	AB=1.000;AC=12;AF=0.214;AN=56;BaseQRankSum=8.884;DP=669;FS=2.203;HRun=0;HaplotypeScore=121.8154;InbreedingCoeff=0.7618;MQ=66.86;MQ0=5;MQRankSum=-1.600;QD=12.94;ReadPosRankSum=-1.997;VQSLOD=3.2058;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:41,0:41:47.70:272,48,0	0/0:6,0:6:18.01:0,18,257	0/0:57,0:23:26.88:0,27,346	0/0:47,0:23:36.40:0,36,360	0/0:34,0:34:99:0,99,1343	0/0:21,0:20:57.17:0,57,845	0/0:29,0:29:86.82:0,87,1229	1/1:25,0:25:57.23:366,57,0	0/0:19,0:19:54.08:0,54,765	0/0:21,0:21:63.17:0,63,856	0/0:14,0:14:41.87:0,42,616	0/0:31,0:31:89.82:0,90,1292	0/0:15,0:15:45.13:0,45,666	0/0:18,0:18:53.97:0,54,678	1/1:21,6:26:61.80:878,62,0	0/0:30,0:30:87.25:0,87,1295	0/1:24,0:24:42.94:58,0,43	1/1:7,17:24:32.97:447,33,0	0/0:25,0:24:64.81:0,65,888	0/0:11,0:11:32.71:0,33,395	0/0:25,0:24:68.43:0,68,832	0/0:13,0:13:36.11:0,36,573	0/0:22,0:22:63.18:0,63,920	0/0:27,0:27:81.23:0,81,1211	1/1:3,13:16:29.96:409,30,0	0/0:20,0:18:12.37:0,12,212	0/1:25,0:25:99:106,0,206	0/0:2,0:2:5.78:0,6,31
chr10	4583102	.	TG	T	2533.66	PASS	AB=0.933;AC=14;AF=0.250;AN=56;BaseQRankSum=10.920;DP=674;FS=6.134;HRun=1;HaplotypeScore=111.1033;InbreedingCoeff=0.8117;MQ=67.37;MQ0=5;MQRankSum=-1.927;QD=12.67;ReadPosRankSum=-2.497;VQSLOD=1.5010;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:40,0:40:99:609,105,0	0/0:6,0:6:18:0,18,202	0/0:58,0:23:13.94:0,14,301	0/0:48,0:24:38.12:0,38,330	0/0:35,0:35:99:0,102,1069	0/0:21,0:20:56.95:0,57,644	0/0:29,0:29:81.48:0,81,934	1/1:25,0:25:73.07:499,73,0	0/0:19,0:19:54.09:0,54,608	0/0:22,0:22:65.94:0,66,696	0/0:15,0:15:34.52:0,35,449	0/0:30,0:30:90.02:0,90,1014	0/0:16,0:16:48.10:0,48,540	0/0:20,0:20:54.47:0,54,534	1/1:17,10:26:72.24:681,72,0	0/0:29,0:29:87.14:0,87,1015	1/1:22,2:24:42.63:239,43,0	1/1:18,5:23:33.01:305,33,0	0/0:24,0:23:59.73:0,60,683	0/0:12,0:12:17.80:0,18,273	0/0:26,0:25:52.58:0,53,628	0/0:12,0:12:36.11:0,36,441	0/0:22,0:22:62.95:0,63,701	0/0:27,0:27:81.01:0,81,940	1/1:14,1:15:30:276,30,0	0/1:20,0:18:2.33:2,0,90	0/1:22,4:26:88.14:111,0,88	0/0:2,0:2:3.11:0,3,7
chr10	4583103	.	G	GT	290.40	PASS	AB=0.945;AC=11;AF=0.196;AN=56;BaseQRankSum=6.666;DP=674;FS=7.600;HRun=11;HaplotypeScore=117.7132;InbreedingCoeff=0.0701;MQ=65.88;MQ0=6;MQRankSum=-5.268;QD=1.08;ReadPosRankSum=-2.346;VQSLOD=-0.4674;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:80.71:0,81,485	0/0:6,0:6:17.65:0,18,122	0/1:58,0:22:14.97:15,0,85	0/0:46,0:24:7.13:0,7,65	0/1:32,3:35:4.68:5,0,513	0/1:19,2:20:7.08:7,0,318	0/0:27,0:29:75.79:0,76,568	1/1:26,0:26:43.34:239,43,0	0/0:19,0:19:46.93:0,47,364	0/1:20,2:22:4.13:4,0,334	0/0:14,0:15:40.89:0,41,307	0/0:30,0:30:26.71:0,27,487	0/0:16,0:16:22.03:0,22,269	0/1:19,1:20:13.93:14,0,232	0/0:26,0:25:26.66:0,27,90	0/0:28,1:29:53.24:0,53,596	0/1:23,0:23:2.43:107,0,2	0/0:23,0:23:19.64:0,20,56	0/0:24,0:23:37.46:0,37,396	0/1:10,1:12:7.52:8,0,122	0/0:21,1:24:17.79:0,18,289	0/0:12,0:12:33.35:0,33,256	0/1:19,3:22:1.10:1,0,358	0/0:27,0:27:65.87:0,66,529	0/0:15,0:15:1.07:0,1,28	0/0:19,0:17:0.77:0,1,86	0/1:27,0:27:26.94:27,0,56	0/0:2,0:2:1.10:0,1,3
chr10	4583107	.	T	TG	1388.28	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=11.804;DP=666;FS=2.952;HRun=0;HaplotypeScore=113.1091;InbreedingCoeff=0.8612;MQ=64.13;MQ0=6;MQRankSum=-1.630;QD=12.18;ReadPosRankSum=0.127;VQSLOD=4.5706;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:41,0:41:61.83:298,62,0	0/0:6,0:6:18.06:0,18,246	0/0:60,0:21:42.12:0,42,320	0/0:44,0:21:34.38:0,34,354	0/0:35,0:35:83.59:0,84,1171	0/0:21,0:20:46.73:0,47,689	0/0:27,0:27:81.19:0,81,1072	1/1:3,22:25:43.22:686,43,0	0/0:18,0:18:51.14:0,51,689	0/0:23,0:23:58.20:0,58,792	0/0:15,0:15:42.11:0,42,565	0/0:30,0:30:84.56:0,85,1101	0/0:16,0:16:47.35:0,47,600	0/0:18,0:18:46.79:0,47,603	0/0:26,0:25:74.71:0,75,675	0/0:29,0:29:82.04:0,82,1149	0/0:23,0:23:42.41:0,42,331	0/0:22,0:22:32.98:0,33,286	0/0:27,0:26:73.07:0,73,906	0/0:13,0:13:27.82:0,28,349	0/0:23,0:22:55.46:0,55,726	0/0:13,0:13:39.04:0,39,505	0/0:21,0:21:49.75:0,50,745	0/0:26,0:26:78.20:0,78,1035	0/0:15,0:15:27.92:0,28,262	0/1:20,0:18:10.10:162,0,10	1/1:25,0:25:36.15:351,36,0	1/1:3,0:3:8.80:52,9,0
chr10	4583119	.	G	GT	1027.63	PASS	AB=0.958;AC=7;AF=0.125;AN=56;BaseQRankSum=8.339;DP=655;FS=9.378;HRun=8;HaplotypeScore=109.4219;InbreedingCoeff=0.7574;MQ=65.50;MQ0=3;MQRankSum=-7.286;QD=14.08;ReadPosRankSum=0.459;VQSLOD=2.6164;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,114,1030	0/0:7,0:7:21.01:0,21,192	0/0:38,0:14:1.10:0,1,162	0/0:41,0:24:6:0,6,247	0/0:39,0:39:96.02:0,96,874	0/0:18,0:18:39.02:0,39,357	0/0:31,0:31:84.02:0,84,762	0/0:25,0:25:50.95:0,51,441	0/0:21,0:21:44.97:0,45,404	0/0:22,1:23:16.27:0,16,386	0/0:19,0:19:37.80:0,38,334	0/0:27,0:27:56.09:0,56,515	0/0:15,0:15:32.94:0,33,293	0/0:17,0:17:41.04:0,41,363	0/0:27,0:26:53.92:0,54,484	0/0:34,0:34:83.99:0,84,763	0/1:22,0:23:4.90:5,0,182	0/0:19,0:19:23.04:0,23,197	0/0:25,0:25:60:0,60,545	0/0:14,0:14:30:0,30,275	0/0:19,0:18:38.94:0,39,357	0/0:14,0:14:32.99:0,33,295	0/0:21,0:22:49.94:0,50,423	0/0:30,0:30:63.01:0,63,576	0/0:16,0:16:29.90:0,30,259	1/1:7,14:19:42.12:484,42,0	1/1:8,18:26:51.14:574,51,0	1/1:0,3:3:9.03:104,9,0
chr10	4583303	.	GACAA	G	2017.37	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=7.594;DP=514;FS=13.789;HRun=0;HaplotypeScore=85.3846;InbreedingCoeff=0.7643;MQ=69.47;MQ0=0;MQRankSum=-5.038;QD=34.78;ReadPosRankSum=0.061;VQSLOD=2.8385;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:54.16:0,54,1383	0/0:9,0:9:27.07:0,27,662	0/0:7,0:7:9.03:0,9,165	0/1:12,0:11:8.09:8,0,361	0/0:32,0:32:90.28:0,90,2291	0/0:17,0:17:51.18:0,51,1360	0/0:16,0:16:45.15:0,45,1201	1/1:3,24:26:69.22:1240,69,0	0/0:21,0:21:57.20:0,57,1511	0/0:21,0:21:63.21:0,63,1622	0/0:16,0:16:45.15:0,45,1201	0/0:17,0:17:51.18:0,51,1349	0/0:24,0:24:69.24:0,69,1781	0/0:19,0:19:54.19:0,54,1370	0/0:17,0:17:48.16:0,48,1279	0/0:30,0:30:84.29:0,84,2242	1/1:1,18:19:48.16:896,48,0	0/0:18,0:18:54.17:0,54,1384	0/0:25,0:25:72.24:0,72,1819	0/0:17,0:17:48.15:0,48,1191	0/0:16,0:16:45.14:0,45,1146	0/0:11,0:11:30.10:0,30,779	0/0:23,0:23:69.24:0,69,1838	0/0:15,0:15:45.11:0,45,1140	0/0:13,0:13:39.13:0,39,1041	0/0:21,0:21:57.20:0,57,1520	0/0:30,0:30:87.30:0,87,2216	0/0:3,0:3:9.03:0,9,240
chr10	4583342	.	TA	T	1110.93	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.374;DP=536;FS=3.503;HRun=9;HaplotypeScore=55.7009;InbreedingCoeff=0.9816;MQ=69.27;MQ0=0;MQRankSum=-2.354;QD=19.49;ReadPosRankSum=2.817;VQSLOD=4.2221;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:66.15:0,66,729	0/0:9,0:9:24.07:0,24,277	0/0:10,0:10:18.05:0,18,202	0/0:8,0:8:12.50:0,13,135	0/0:37,0:37:99:0,105,1188	0/0:23,0:23:66.17:0,66,741	0/0:16,0:16:42.12:0,42,485	0/0:23,0:22:57.16:0,57,649	0/0:21,0:21:51.15:0,51,588	0/0:22,0:22:60.18:0,60,692	0/0:24,0:24:57.13:0,57,643	0/0:20,0:20:51.11:0,51,573	0/0:21,0:21:51.15:0,51,588	0/0:16,0:17:50.98:0,51,568	0/0:17,0:17:48.14:0,48,554	0/0:26,0:26:75.20:0,75,846	0/0:18,0:18:48.14:0,48,554	0/0:16,0:16:42.12:0,42,484	0/0:20,0:20:54.11:0,54,607	0/0:19,1:20:23.67:0,24,516	0/0:15,0:15:39.12:0,39,450	0/0:14,0:14:39.10:0,39,441	0/0:29,0:29:81.24:0,81,935	0/0:10,0:10:30.09:0,30,346	0/0:19,0:19:57.17:0,57,657	1/1:3,18:21:22.40:456,22,0	1/1:4,26:30:69.04:631,69,0	1/1:0,6:6:18.01:165,18,0
chr10	4583477	.	A	AAAAC	617.74	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=-1.667;DP=599;FS=7.393;HRun=0;HaplotypeScore=112.8255;InbreedingCoeff=0.6440;MQ=70.28;MQ0=2;MQRankSum=-1.487;QD=20.59;ReadPosRankSum=-1.857;VQSLOD=2.6302;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:86.11:0,86,735	0/0:12,0:12:21.07:0,21,345	0/0:20,0:17:9.17:0,9,188	0/1:13,0:8:12.11:13,0,12	0/0:33,0:33:84.15:0,84,1235	0/0:28,0:28:63.19:0,63,966	0/0:15,0:15:30.09:0,30,476	0/0:18,0:18:37.45:0,37,350	0/0:17,0:17:42.09:0,42,664	0/0:26,0:26:60.18:0,60,879	0/0:24,0:24:57.15:0,57,917	0/0:19,0:19:48.16:0,48,776	0/0:21,0:21:57.14:0,57,870	0/0:16,0:16:39.11:0,39,596	0/0:18,0:18:24.02:0,24,243	0/0:21,0:21:48.14:0,48,738	1/1:6,11:17:16.07:704,16,0	0/0:17,0:17:39.04:0,39,384	0/0:23,0:22:54.17:0,54,826	0/0:24,0:24:48.07:0,48,679	0/0:12,0:12:33.11:0,33,549	0/0:21,0:21:42.05:0,42,607	0/0:25,0:25:60.18:0,60,928	0/0:24,0:24:45.08:0,45,670	0/0:28,0:28:54.95:0,55,508	0/0:18,0:18:45.08:0,45,547	0/0:26,0:26:72.23:0,72,901	0/0:11,0:11:27.02:0,27,286
chr10	4583491	.	AAC	A	859.39	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=9.600;DP=613;FS=0.000;HRun=0;HaplotypeScore=92.4196;InbreedingCoeff=0.9876;MQ=67.94;MQ0=2;MQRankSum=0.224;QD=9.34;ReadPosRankSum=-3.415;VQSLOD=2.6563;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:95.82:0,96,1176	0/0:9,0:9:27.08:0,27,405	0/0:19,0:16:30.65:0,31,338	0/0:17,0:12:22.43:0,22,174	0/0:35,0:35:74.99:0,75,1357	0/0:25,0:25:71.42:0,71,1069	0/0:17,0:17:42.05:0,42,581	1/1:26,1:27:66.95:391,67,0	0/0:19,0:19:51.16:0,51,780	0/0:24,0:24:72.05:0,72,1027	0/0:24,0:24:68.69:0,69,1037	0/0:20,0:20:53.97:0,54,864	0/0:20,0:20:60.14:0,60,913	0/0:18,0:18:54.15:0,54,757	1/1:21,0:21:10.99:86,11,0	0/0:24,0:24:72.01:0,72,984	0/0:14,0:14:35.99:0,36,336	1/1:17,0:17:28.77:205,29,0	0/0:25,0:24:71.87:0,72,994	0/0:27,0:27:58.90:0,59,928	0/0:13,0:13:39.13:0,39,609	0/0:18,0:18:50.11:0,50,669	0/0:24,0:24:67.93:0,68,982	0/0:20,0:20:51.11:0,51,743	1/1:24,3:27:52.27:334,52,0	0/0:20,0:20:47.99:0,48,308	0/0:29,0:29:61.76:0,62,317	0/0:13,0:13:34.57:0,35,224
chr10	4583492	.	AC	A	2399.21	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=8.991;DP=610;FS=0.423;HRun=1;HaplotypeScore=74.6328;InbreedingCoeff=0.7327;MQ=68.70;MQ0=2;MQRankSum=-0.667;QD=14.03;ReadPosRankSum=-1.260;VQSLOD=2.3735;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,100,756	0/0:9,0:9:27.08:0,27,329	0/0:19,1:16:25.73:0,26,281	0/1:18,0:13:11.08:11,0,107	0/0:35,0:35:63.95:0,64,1040	0/0:25,0:25:53.94:0,54,791	0/0:16,0:16:39.79:0,40,480	1/1:1,25:26:74.98:859,75,0	0/0:19,0:19:51.03:0,51,600	0/0:24,0:24:69.12:0,69,813	0/0:25,0:25:68.61:0,69,811	0/0:20,0:20:55.71:0,56,676	0/0:20,0:20:59.19:0,59,710	0/0:18,0:18:54.13:0,54,621	1/1:1,20:21:24.08:333,24,0	0/0:25,0:25:68.54:0,69,810	0/0:13,0:13:35.32:0,35,224	1/1:9,9:18:45.93:553,46,0	0/0:25,0:24:66.06:0,66,790	0/0:25,0:25:57.17:0,57,768	0/0:14,0:14:39.09:0,39,490	0/0:17,0:17:45.99:0,46,519	0/0:23,0:23:53.78:0,54,755	0/0:18,0:18:51:0,51,575	1/1:4,23:27:59.83:761,60,0	0/1:20,0:20:6.16:6,0,75	1/1:29,0:29:14.16:49,14,0	0/1:12,0:12:6.54:7,0,50
chr10	4583493	.	CA	C	1682.63	PASS	AB=1.000;AC=12;AF=0.214;AN=56;BaseQRankSum=8.848;DP=622;FS=6.346;HRun=10;HaplotypeScore=79.0237;InbreedingCoeff=0.7911;MQ=69.28;MQ0=2;MQRankSum=-0.653;QD=10.72;ReadPosRankSum=0.564;VQSLOD=2.9159;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:48:99:0,110,605	0/0:9,0:9:27.07:0,27,295	0/0:20,0:16:29.61:0,30,250	0/0:18,0:13:17.43:0,17,181	0/0:33,2:35:38.04:0,38,836	0/0:24,2:26:36.91:0,37,618	0/0:15,0:15:38.93:0,39,399	1/1:27,0:27:22.57:207,23,0	0/0:17,0:19:50.97:0,51,545	0/0:25,1:26:31.10:0,31,569	0/0:26,0:26:69.14:0,69,734	0/0:21,0:21:42.45:0,42,569	0/0:20,0:20:57.12:0,57,612	0/0:18,0:18:48.11:0,48,522	0/1:21,0:21:7.02:86,0,7	0/0:24,1:25:40.11:0,40,662	0/0:15,0:15:32.23:0,32,197	0/1:20,0:20:72.14:135,0,72	0/0:24,2:25:11.05:0,11,570	0/0:25,0:25:58.03:0,58,624	0/0:14,0:14:42.10:0,42,456	0/0:18,0:19:19.75:0,20,413	0/0:21,1:22:31.18:0,31,571	0/0:17,0:18:44.94:0,45,470	1/1:28,0:28:15.05:193,15,0	1/1:3,17:20:17.80:383,18,0	1/1:0,28:29:74.02:631,74,0	1/1:3,9:12:26.93:227,27,0
chr10	4584231	.	G	GC	5704.87	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-11.552;DP=663;FS=0.351;HRun=3;HaplotypeScore=64.2068;InbreedingCoeff=0.9683;MQ=85.09;MQ0=0;MQRankSum=-1.420;QD=36.11;ReadPosRankSum=0.017;VQSLOD=5.1930;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,34:36:90.30:1260,90,0	0/0:8,0:8:21.06:0,21,252	0/0:23,0:23:66.12:0,66,731	0/0:18,0:18:42.08:0,42,463	0/0:15,0:15:39.12:0,39,468	0/0:19,0:19:54.16:0,54,648	0/0:38,0:38:99:0,111,1306	1/1:3,32:35:93.31:1294,93,0	0/0:23,0:23:66.20:0,66,791	0/0:15,0:15:42.12:0,42,494	0/0:12,0:12:30.09:0,30,359	0/0:43,0:43:99:0,117,1368	0/0:35,0:35:99:0,105,1248	0/0:19,0:19:57.17:0,57,684	0/0:30,0:30:75.23:0,75,900	0/0:33,0:33:96.29:0,96,1151	1/1:2,31:33:87.29:1218,87,0	0/0:19,0:19:54.15:0,54,634	0/0:17,0:17:45.12:0,45,517	0/0:18,0:18:51.13:0,51,591	0/0:56,0:56:99:0,159,1853	0/0:10,0:10:30.09:0,30,358	0/0:17,0:17:42.11:0,42,492	0/0:27,0:27:81.23:0,81,958	0/0:10,0:10:21.06:0,21,252	1/1:3,21:24:5.57:758,6,0	1/1:0,25:25:72.24:1007,72,0	1/1:0,5:5:12.04:168,12,0
chr10	4585996	.	T	TA	1427.94	PASS	AB=0.773;AC=6;AF=0.107;AN=56;BaseQRankSum=-8.151;DP=597;FS=0.000;HRun=8;HaplotypeScore=56.8179;InbreedingCoeff=0.7781;MQ=70.66;MQ0=0;MQRankSum=-0.762;QD=20.69;ReadPosRankSum=0.693;VQSLOD=3.4643;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:81.01:0,81,737	0/0:11,0:11:24:0,24,219	0/0:10,0:9:9:0,9,82	0/1:8,0:7:0.21:0,0,46	0/0:27,0:27:74.95:0,75,664	0/0:25,0:25:65.95:0,66,580	0/0:24,0:24:63.02:0,63,577	0/0:24,0:24:50.99:0,51,459	0/0:24,0:24:63.03:0,63,576	0/0:25,0:25:69.03:0,69,629	0/0:20,0:20:54.03:0,54,494	0/0:27,0:27:72.02:0,72,654	0/0:20,0:20:47.99:0,48,430	0/0:20,0:20:60.02:0,60,546	0/0:33,0:33:84.04:0,84,769	0/0:30,0:30:84.01:0,84,757	0/0:2,0:18:30.55:0,31,90	0/0:17,0:17:42.02:0,42,384	0/0:18,0:18:48.03:0,48,439	0/0:26,0:26:72.02:0,72,654	0/0:18,0:18:45.02:0,45,412	0/0:20,0:20:56.99:0,57,511	0/0:17,0:17:47.62:0,48,421	0/0:11,0:11:30.02:0,30,274	0/0:31,0:31:84.01:0,84,759	0/1:5,25:30:1.19:726,0,1	1/1:5,15:20:42.12:485,42,0	1/1:0,11:11:30.09:346,30,0
chr10	4586707	.	CAT	C	224.27	PASS	AB=1.000;AC=4;AF=0.071;AN=56;BaseQRankSum=2.691;DP=651;FS=40.686;HRun=0;HaplotypeScore=98.5055;InbreedingCoeff=0.3842;MQ=57.77;MQ0=7;MQRankSum=-2.234;QD=4.31;ReadPosRankSum=-4.378;VQSLOD=-0.4187;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,2:33:9.54:0,10,394	0/0:14,0:14:32.25:0,32,467	0/0:25,0:9:17.76:0,18,140	0/0:18,0:13:18.03:0,18,286	0/0:16,0:16:47.64:0,48,611	0/0:34,0:34:5.75:0,6,1118	0/0:19,0:19:5.23:0,5,473	1/1:18,0:16:42.23:316,42,0	0/0:19,0:19:7.38:0,7,682	0/0:18,0:18:25.70:0,26,381	0/0:14,0:14:10.04:0,10,224	0/0:33,0:33:61.96:0,62,896	0/0:23,0:23:42.61:0,43,760	0/0:20,0:20:29.71:0,30,508	0/0:26,0:26:65.41:0,65,810	0/0:25,0:25:59.88:0,60,825	0/0:35,0:35:16.02:0,16,184	0/1:20,0:20:6.32:6,0,590	0/1:14,0:14:7.68:8,0,419	0/0:12,4:16:29.72:0,30,332	0/0:49,1:49:17.38:0,17,1235	0/0:15,0:15:21.64:0,22,317	0/0:17,0:17:12.10:0,12,396	0/0:47,0:47:74.78:0,75,1413	0/0:25,0:25:26.62:0,27,736	0/0:27,0:26:68.47:0,68,726	0/0:20,0:18:36.70:0,37,346	0/0:9,0:9:27.01:0,27,295
chr10	4586709	.	TAC	T	124.91	PASS	AB=0.941;AC=12;AF=0.231;AN=52;BaseQRankSum=5.554;DP=652;FS=0.000;HRun=0;HaplotypeScore=99.4477;InbreedingCoeff=-0.1091;MQ=57.40;MQ0=7;MQRankSum=-0.973;QD=0.45;ReadPosRankSum=-0.804;VQSLOD=1.2454;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:35,0:34:68.39:68,0,233	0/0:11,0:14:9.70:0,10,296	./.	./.	0/0:15,0:18:36.10:0,36,490	0/0:34,0:34:31.36:0,31,675	0/1:18,1:19:27.75:28,0,230	0/0:20,0:18:14.53:0,15,88	0/0:18,0:18:16.37:0,16,474	0/1:14,0:21:2.16:2,0,225	0/1:5,1:14:16.59:17,0,95	0/0:31,1:32:5.01:0,5,521	0/0:22,0:23:29.20:0,29,553	0/1:15,3:18:37.17:37,0,331	0/0:23,2:25:5.50:0,6,506	0/1:23,1:24:3.54:4,0,375	1/1:37,0:37:8.42:42,8,0	0/1:20,0:20:8.08:8,0,443	0/0:13,0:13:12.04:0,12,318	0/0:15,0:15:14.89:0,15,223	0/0:51,1:51:24.49:0,24,939	0/0:15,0:15:2.80:0,3,277	0/1:16,2:18:7.01:7,0,272	0/1:40,6:46:24.98:25,0,846	0/1:23,2:25:25.82:26,0,502	0/0:28,0:27:41.91:0,42,456	0/0:17,0:16:13.33:0,13,273	0/0:9,0:9:20.62:0,21,198
chr10	4586711	.	C	CAT	615.23	PASS	AB=0.849;AC=6;AF=0.107;AN=56;BaseQRankSum=7.985;DP=648;FS=0.000;HRun=0;HaplotypeScore=104.1653;InbreedingCoeff=0.2444;MQ=55.41;MQ0=7;MQRankSum=-0.380;QD=6.99;ReadPosRankSum=3.398;VQSLOD=3.1639;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:35:46.92:0,47,645	0/0:14,0:14:36.01:0,36,439	0/0:22,0:6:15.01:0,15,141	0/0:16,0:10:17.22:0,17,210	0/0:18,0:18:26.64:0,27,575	0/0:32,0:32:87.03:0,87,1060	0/0:20,0:20:50.95:0,51,533	0/0:23,0:21:54.37:0,54,399	0/0:16,0:16:45.10:0,45,606	0/1:21,0:21:22.31:22,0,254	0/1:14,0:14:59.81:60,0,75	0/0:33,0:33:89.85:0,90,999	0/0:24,0:24:68.69:0,69,813	0/0:18,0:18:44.99:0,45,523	0/0:25,0:25:66.04:0,66,783	0/0:22,0:22:57.01:0,57,652	0/0:35,0:35:35.78:0,36,285	0/0:19,0:20:32.96:0,33,601	0/0:15,0:15:41.08:0,41,492	0/0:16,0:16:29.91:0,30,338	0/0:52,0:51:99:0,129,1497	0/0:16,0:16:38.79:0,39,447	0/0:18,0:18:47.95:0,48,508	0/0:46,0:46:99:0,124,1444	0/0:23,0:23:62.63:0,63,746	0/1:13,14:26:99:349,0,130	0/1:11,6:16:80.45:160,0,80	1/1:9,0:9:17.46:153,17,0
chr10	4586735	.	CACACACACAT	C	287.27	PASS	AB=1.000;AC=4;AF=0.071;AN=56;BaseQRankSum=0.214;DP=660;FS=0.000;HRun=0;HaplotypeScore=191.8792;InbreedingCoeff=0.3944;MQ=55.16;MQ0=9;MQRankSum=-1.601;QD=2.99;ReadPosRankSum=-3.750;VQSLOD=1.8481;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:35,0:34:40.69:41,0,1023	0/0:11,0:11:23.62:0,24,1125	0/0:19,0:5:8.13:0,8,103	0/0:19,0:8:24.02:0,24,274	0/0:19,0:19:51.09:0,51,1893	0/0:28,0:28:72.22:0,72,2771	0/0:20,0:20:48.01:0,48,1353	0/1:24,0:21:68.65:69,0,142	0/0:19,0:19:50.94:0,51,1946	0/0:24,0:24:54.51:0,55,1357	0/0:13,0:13:26.96:0,27,812	0/0:32,0:32:65.20:0,65,2355	0/0:27,0:27:69.61:0,70,2219	0/0:18,0:18:36.09:0,36,1369	0/0:22,0:22:63.16:0,63,2191	0/0:18,0:18:45.10:0,45,1644	1/1:9,28:37:8.77:286,9,0	0/0:22,0:22:30.96:0,31,1882	0/0:17,0:17:45.79:0,46,1292	0/0:16,0:16:26.54:0,27,840	0/0:53,0:52:99:0,124,4324	0/0:14,0:14:31.03:0,31,1192	0/0:16,0:16:39.08:0,39,1103	0/0:42,0:42:97.16:0,97,3749	0/0:28,0:28:66.15:0,66,2355	0/0:34,0:33:78.44:0,78,2004	0/0:20,0:18:51.11:0,51,1397	0/0:13,0:13:35.87:0,36,877
chr10	4586743	.	CAT	C	766.09	PASS	AB=0.938;AC=6;AF=0.107;AN=56;BaseQRankSum=3.803;DP=633;FS=18.223;HRun=0;HaplotypeScore=95.8116;InbreedingCoeff=0.5747;MQ=58.57;MQ0=8;MQRankSum=-1.824;QD=6.78;ReadPosRankSum=-0.762;VQSLOD=1.6898;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:32,3:34:42.63:418,0,43	0/0:10,0:10:23.43:0,23,369	0/0:16,0:8:17.11:0,17,181	0/0:15,0:8:24.02:0,24,244	0/0:22,0:22:60.03:0,60,807	0/0:27,0:27:74.41:0,74,949	0/0:20,0:20:36.41:0,36,570	1/1:28,0:25:56.98:407,57,0	0/0:21,0:21:58.68:0,59,788	0/0:21,0:21:47.33:0,47,466	0/0:15,0:15:6.90:0,7,215	0/0:29,0:29:44.28:0,44,869	0/0:27,0:27:72.66:0,73,938	0/0:14,1:15:11.24:0,11,442	0/0:24,0:24:59.03:0,59,913	0/0:16,0:16:34.92:0,35,589	1/1:29,0:29:8.90:60,9,0	0/1:20,1:21:10.58:11,0,622	0/0:17,0:17:50.36:0,50,591	0/0:17,0:17:35.80:0,36,417	0/0:49,0:48:69.64:0,70,1494	0/0:12,0:14:30.07:0,30,477	0/0:15,0:15:32.85:0,33,475	0/0:39,0:39:71.08:0,71,1345	0/0:26,0:26:52.83:0,53,874	0/0:29,0:28:74.45:0,74,814	0/0:21,0:19:47.02:0,47,546	0/0:15,0:15:32.27:0,32,372
chr10	4587541	.	A	AG	6068.30	PASS	AB=1.000;AC=43;AF=0.977;AN=44;BaseQRankSum=-2.645;DP=193;FS=4.528;HRun=0;HaplotypeScore=57.7158;InbreedingCoeff=-0.0431;MQ=51.80;MQ0=0;MQRankSum=0.055;QD=31.77;ReadPosRankSum=3.101;VQSLOD=4.7472;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,12:16:38.99:529,39,0	1/1:0,1:1:3.01:48,3,0	0/1:2,0:2:9.86:10,0,19	./.	1/1:0,2:2:3.01:36,3,0	./.	1/1:4,20:24:63.15:894,63,0	1/1:0,5:5:12.04:190,12,0	1/1:0,3:3:9.03:141,9,0	1/1:0,1:1:3:25,3,0	1/1:0,3:3:3.01:48,3,0	1/1:0,3:3:9.03:137,9,0	./.	1/1:4,2:6:12.02:154,12,0	1/1:3,5:8:18.06:284,18,0	./.	1/1:9,14:23:54.16:815,54,0	1/1:11,10:21:57.17:871,57,0	1/1:1,5:6:15.05:238,15,0	1/1:1,2:3:6.02:90,6,0	1/1:9,22:31:32.60:511,33,0	./.	1/1:0,3:3:3.01:48,3,0	1/1:8,14:22:45.15:696,45,0	1/1:0,4:4:12.04:186,12,0	1/1:0,3:3:6.02:96,6,0	1/1:1,0:1:2.98:22,3,0	./.
chr10	4587546	.	GC	G	3552.19	PASS	AB=0.500;AC=35;AF=0.921;AN=38;BaseQRankSum=-1.732;DP=179;FS=4.894;HRun=4;HaplotypeScore=59.0513;InbreedingCoeff=0.3396;MQ=47.96;MQ0=0;MQRankSum=-1.732;QD=20.77;ReadPosRankSum=0.898;VQSLOD=2.8958;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,7:13:23.77:238,24,0	./.	0/0:1,0:1:1.25:0,1,3	./.	1/1:0,2:2:3.01:35,3,0	./.	1/1:0,22:22:48.13:539,48,0	1/1:2,3:5:9.03:106,9,0	1/1:1,2:3:9.01:93,9,0	1/1:0,1:1:2.37:8,2,0	0/1:0,2:2:0:0,0,0	1/1:0,3:3:9.03:102,9,0	./.	1/1:1,3:4:9.02:98,9,0	1/1:2,6:8:18.05:211,18,0	./.	1/1:9,13:22:42.12:492,42,0	1/1:8,11:19:45.14:535,45,0	1/1:1,4:5:12.04:140,12,0	1/1:0,3:3:9.03:102,9,0	1/1:7,24:31:26.82:296,27,0	./.	./.	1/1:11,13:24:44.93:455,45,0	1/1:0,3:3:6.02:66,6,0	./.	1/1:0,1:1:3.01:36,3,0	./.
chr10	4588662	.	CAG	C	5279.91	PASS	AB=0.925;AC=14;AF=0.250;AN=56;BaseQRankSum=8.892;DP=756;FS=3.398;HRun=0;HaplotypeScore=102.5993;InbreedingCoeff=0.7628;MQ=72.89;MQ0=2;MQRankSum=-0.215;QD=22.66;ReadPosRankSum=2.932;VQSLOD=5.6120;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,46:55:99:1553,129,0	0/0:14,1:15:4.94:0,5,592	0/0:30,0:26:7:0,7,856	0/0:32,1:31:50.81:0,51,700	0/0:26,1:27:16.96:0,17,774	0/1:19,2:21:23.25:23,0,656	0/0:30,0:30:60.20:0,60,984	1/1:7,17:24:48.14:583,48,0	0/0:29,0:28:69.24:0,69,1123	0/0:35,0:35:78.26:0,78,1256	0/0:22,1:23:10.96:0,11,692	0/0:34,1:35:44.07:0,44,1237	0/1:28,2:30:5.14:5,0,958	0/0:13,1:14:4.94:0,5,598	1/1:3,23:27:72.06:870,72,0	0/0:24,1:25:29.02:0,29,996	1/1:4,23:28:69.05:832,69,0	1/1:3,16:19:45.14:558,45,0	0/0:36,0:36:78.24:0,78,1242	0/0:21,1:22:13.97:0,14,744	0/0:17,0:17:45.15:0,45,738	0/0:24,0:24:63.22:0,63,1033	0/0:26,0:26:51.17:0,51,837	0/0:28,0:28:81.28:0,81,1329	1/1:4,25:29:69.22:856,69,0	0/0:4,0:29:75.06:0,75,703	0/0:10,0:32:66:0,66,610	0/0:3,0:13:21.02:0,21,208
chr10	4588954	.	G	GA	6978.12	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=-15.141;DP=672;FS=11.788;HRun=8;HaplotypeScore=58.8484;InbreedingCoeff=0.9199;MQ=71.80;MQ0=0;MQRankSum=-1.440;QD=26.53;ReadPosRankSum=0.697;VQSLOD=4.8763;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,28:32:60.18:692,60,0	0/0:9,0:9:24.01:0,24,220	0/1:13,0:13:15.24:15,0,74	0/0:8,0:8:17.73:0,18,129	0/0:23,0:23:60.02:0,60,545	0/0:42,0:42:99:0,108,988	0/0:10,0:10:24.01:0,24,220	1/1:4,33:36:96.27:1097,96,0	0/0:29,0:29:68.98:0,69,623	0/0:39,0:39:99:0,108,988	0/0:30,0:30:84.04:0,84,769	0/0:27,0:27:78.03:0,78,709	0/0:24,0:24:57.02:0,57,522	0/0:15,0:15:38.99:0,39,348	1/1:3,23:26:63.19:727,63,0	0/0:23,0:23:63:0,63,566	1/1:1,20:21:57.17:658,57,0	1/1:1,26:28:56.62:887,57,0	0/0:21,0:21:60.03:0,60,549	0/0:28,0:28:66:0,66,599	0/0:21,0:21:48.01:0,48,435	0/0:30,0:30:66.03:0,66,604	0/0:18,0:18:48.02:0,48,439	0/0:12,0:12:33.02:0,33,302	1/1:3,22:25:60.18:693,60,0	1/1:6,22:28:20.28:741,20,0	1/1:4,24:29:60.01:672,60,0	1/1:1,23:24:69.21:796,69,0
chr10	4589157	.	GA	G	2559.57	PASS	AB=0.897;AC=12;AF=0.214;AN=56;BaseQRankSum=11.941;DP=712;FS=5.365;HRun=10;HaplotypeScore=74.6954;InbreedingCoeff=0.7707;MQ=68.76;MQ0=0;MQRankSum=-0.759;QD=13.91;ReadPosRankSum=2.133;VQSLOD=3.9506;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:97.46:0,97,1039	0/0:11,1:12:7.04:0,7,306	0/1:16,1:15:10.25:10,0,121	0/0:9,0:9:14.98:0,15,146	0/0:28,1:31:51.79:0,52,742	0/0:16,0:16:48.13:0,48,531	0/0:10,0:10:30.08:0,30,332	1/1:6,0:39:59:175,59,0	0/0:29,1:29:58.16:0,58,849	0/0:34,1:35:38.49:0,38,830	0/0:8,0:8:18.05:0,18,199	0/0:26,0:28:74.87:0,75,792	0/0:27,0:28:65.97:0,66,685	0/0:33,1:34:42.84:0,43,776	1/1:1,33:34:95.98:833,96,0	0/0:23,1:24:43.14:0,43,704	1/1:2,25:27:65.98:573,66,0	1/1:3,26:29:77.98:677,78,0	0/0:21,0:21:54.05:0,54,551	0/0:43,1:44:82.23:0,82,1127	0/0:30,2:32:26.09:0,26,728	0/0:32,0:32:87.06:0,87,914	0/1:14,3:17:29.83:30,0,375	0/0:24,0:25:72.03:0,72,777	1/1:2,19:21:50.98:443,51,0	0/0:28,0:30:68.83:0,69,703	0/0:30,1:31:48.98:0,49,743	0/0:5,0:5:12.03:0,12,133
chr10	4590191	.	AAGCGAGCG	A	746.17	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.766;DP=694;FS=3.366;HRun=0;HaplotypeScore=176.7336;InbreedingCoeff=0.8552;MQ=67.82;MQ0=11;MQRankSum=-2.521;QD=20.73;ReadPosRankSum=0.864;VQSLOD=2.9302;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:6,30:36:34.93:841,35,0	0/0:9,0:9:27.09:0,27,884	0/0:30,0:10:11.81:0,12,183	0/0:40,0:24:4.88:0,5,259	0/0:28,0:28:57.16:0,57,1665	0/0:29,0:29:69.23:0,69,1958	0/0:30,0:30:78.22:0,78,2391	0/0:18,0:17:24.41:0,24,437	0/0:22,0:22:51.07:0,51,1324	0/0:29,0:28:59.98:0,60,1633	0/0:22,0:22:54.16:0,54,1558	0/0:32,0:32:90.22:0,90,2920	0/0:30,0:30:81.26:0,81,2541	0/0:22,0:22:48.16:0,48,1603	0/0:29,0:29:78.21:0,78,2374	0/0:23,0:23:45.11:0,45,1528	0/0:31,0:31:78.22:0,78,2719	0/0:21,0:21:51.02:0,51,1621	0/0:17,0:16:33.10:0,33,946	0/0:17,0:17:45.11:0,45,1474	0/0:30,0:30:81.22:0,81,2352	0/0:29,0:29:64.41:0,64,1612	0/0:11,0:11:21.07:0,21,691	0/0:23,0:23:54.10:0,54,1507	0/0:20,0:20:36.12:0,36,1340	0/0:23,0:23:32.53:0,33,1026	0/0:26,0:26:41.77:0,42,1016	0/0:17,0:17:41.92:0,42,940
chr10	4590206	.	C	CGAGA	2137.12	PASS	AB=1.000;AC=8;AF=0.143;AN=56;BaseQRankSum=9.587;DP=713;FS=14.104;HRun=0;HaplotypeScore=125.7773;InbreedingCoeff=0.7148;MQ=65.73;MQ0=13;MQRankSum=-6.285;QD=13.53;ReadPosRankSum=1.164;VQSLOD=2.5213;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:42.01:0,42,440	0/0:9,0:9:27.09:0,27,452	0/1:39,0:14:32.59:33,0,71	0/1:49,0:22:11.98:12,0,233	0/0:22,0:22:62.78:0,63,897	0/0:25,0:25:69.24:0,69,1215	0/0:36,0:36:99:0,105,1472	0/0:23,0:22:33.88:0,34,282	0/0:22,0:22:60.10:0,60,853	0/0:23,0:22:62.88:0,63,918	0/0:18,0:18:54.08:0,54,853	0/0:35,0:35:99:0,99,1560	0/0:30,0:30:75.44:0,75,1353	0/0:19,0:19:54.07:0,54,906	0/0:33,0:33:90.21:0,90,1429	0/0:16,0:16:45.13:0,45,768	0/0:30,0:30:84.11:0,84,1379	0/0:20,0:20:51.12:0,51,862	0/0:19,0:17:40.27:0,40,535	0/0:25,0:25:63.74:0,64,876	0/0:38,0:38:92.78:0,93,1371	0/0:23,0:23:63.51:0,64,976	0/0:14,0:12:33.01:0,33,440	0/0:21,0:21:57.05:0,57,815	0/0:16,0:16:48.05:0,48,752	1/1:8,16:24:48.44:847,48,0	1/1:3,20:27:39.11:768,39,0	1/1:3,12:18:30.09:632,30,0
chr10	4592335	.	CCA	C	297.37	PASS	AB=0.958;AC=21;AF=0.457;AN=46;BaseQRankSum=2.677;DP=534;FS=5.646;HRun=0;HaplotypeScore=64.5373;InbreedingCoeff=0.0438;MQ=67.32;MQ0=18;MQRankSum=-0.165;QD=1.05;ReadPosRankSum=1.273;VQSLOD=0.9135;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	1/1:16,0:15:2.99:24,3,0	0/0:17,0:16:2.99:0,3,23	0/1:21,0:19:23.22:23,0,37	./.	0/1:21,1:22:13.52:14,0,41	0/0:15,0:15:3.01:0,3,42	0/0:14,0:14:3:0,3,26	0/1:24,1:24:22.69:23,0,68	0/1:13,0:13:8.13:8,0,38	0/0:13,0:13:9.03:0,9,125	1/1:20,0:20:2.84:14,3,0	0/0:14,0:14:3.01:0,3,42	1/1:23,6:27:6.01:63,6,0	1/1:13,3:14:8.04:94,8,0	0/0:13,0:13:3.01:0,3,44	0/0:12,0:12:5.99:0,6,65	0/1:33,0:31:16.40:16,0,36	0/0:16,0:16:5.98:0,6,46	0/1:19,0:19:0.63:1,0,44	0/0:37,0:36:1.39:0,1,398	1/1:17,0:17:2.84:14,3,0	1/1:14,0:13:5.72:45,6,0	0/1:20,4:23:31.71:83,0,32	1/1:12,0:13:1.11:11,1,0
chr10	4592968	.	TAAAA	T	1537.80	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=3.318;DP=677;FS=1.129;HRun=16;HaplotypeScore=125.9521;InbreedingCoeff=0.9750;MQ=73.08;MQ0=4;MQRankSum=-1.240;QD=20.78;ReadPosRankSum=5.685;VQSLOD=2.1614;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:35.13:0,35,609	0/0:9,0:9:21.07:0,21,423	0/0:32,0:17:18.66:0,19,211	0/0:22,0:15:10.90:0,11,136	0/0:28,0:32:87.05:0,87,1194	0/0:19,0:18:42.06:0,42,669	0/0:20,0:21:44.94:0,45,578	0/0:27,0:25:51.43:0,51,563	0/0:29,0:31:84.11:0,84,1224	0/0:19,0:24:47.23:0,47,594	0/0:13,0:17:38.98:0,39,536	0/0:20,0:25:56.99:0,57,743	0/0:25,0:26:58.62:0,59,805	0/0:18,0:18:36.07:0,36,555	0/0:25,0:27:29.23:0,29,473	0/0:21,0:24:54.11:0,54,958	0/0:26,0:26:65.81:0,66,621	0/0:20,0:22:39.30:0,39,382	0/0:18,0:23:60.03:0,60,863	0/0:27,0:28:57.52:0,58,840	0/0:15,0:16:38.87:0,39,567	0/0:18,0:26:56.97:0,57,873	0/0:25,0:25:45.02:0,45,570	0/0:26,0:29:66.60:0,67,980	0/0:18,0:18:14.35:0,14,123	1/1:11,17:29:47.46:551,47,0	1/1:5,23:29:44.84:591,45,0	1/1:1,13:16:26.11:538,26,0
chr10	4592982	.	AAAG	A	2329.85	PASS	AB=1.000;AC=16;AF=0.286;AN=56;BaseQRankSum=4.102;DP=698;FS=25.066;HRun=0;HaplotypeScore=116.1944;InbreedingCoeff=0.5142;MQ=63.66;MQ0=6;MQRankSum=-3.560;QD=7.79;ReadPosRankSum=-2.157;VQSLOD=1.1055;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:36,3:39:93.11:675,93,0	0/0:11,0:11:33.07:0,33,447	0/1:28,0:11:8.74:9,0,92	0/1:17,0:10:0.43:0,0,111	0/0:40,0:40:66.77:0,67,933	0/0:22,0:21:46.52:0,47,610	0/0:17,0:17:34.34:0,34,383	0/1:32,0:30:29.84:135,0,30	0/0:29,0:29:27.53:0,28,704	0/0:26,0:26:47.71:0,48,514	0/0:21,0:21:42.30:0,42,466	0/0:25,0:25:55.45:0,55,531	0/0:25,0:25:45.37:0,45,557	0/0:15,0:15:38.20:0,38,420	1/1:26,3:29:59.73:505,60,0	0/0:20,0:20:38.10:0,38,661	1/1:33,2:35:85.35:609,85,0	1/1:20,4:22:56.91:473,57,0	0/0:26,0:26:36.48:0,36,639	0/0:27,0:27:55.67:0,56,678	0/0:17,0:17:35.70:0,36,431	0/0:24,0:24:38.87:0,39,672	0/0:26,0:26:59.90:0,60,594	0/0:28,0:28:59.73:0,60,690	1/1:3,18:21:4.64:64,5,0	0/1:26,0:26:3.85:4,0,153	0/1:29,0:29:25.16:25,0,86	0/1:19,0:19:10.22:10,0,34
chr10	4592983	.	AAG	A	2716.22	PASS	AB=0.962;AC=13;AF=0.232;AN=56;BaseQRankSum=2.403;DP=685;FS=37.732;HRun=0;HaplotypeScore=100.9273;InbreedingCoeff=0.8944;MQ=63.28;MQ0=6;MQRankSum=-5.010;QD=13.45;ReadPosRankSum=-4.359;VQSLOD=1.0998;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:31,8:39:96.96:843,97,0	0/0:11,0:11:33.03:0,33,355	0/1:24,1:11:10.31:10,0,66	0/0:16,0:10:14.61:0,15,137	0/0:38,0:38:48.47:0,48,772	0/0:22,0:21:47.96:0,48,516	0/0:17,0:17:30.53:0,31,301	1/1:31,0:29:30.80:336,31,0	0/0:29,0:29:19.42:0,19,505	0/0:25,0:25:47.33:0,47,440	0/0:21,0:21:31.63:0,32,387	0/0:25,0:25:19.44:0,19,369	0/0:24,0:24:27.88:0,28,412	0/0:15,0:15:37.89:0,38,361	1/1:26,1:27:61.95:477,62,0	0/0:18,0:18:35.13:0,35,513	1/1:31,4:35:90.56:764,91,0	1/1:24,0:22:58.44:402,58,0	0/0:25,0:25:34.31:0,34,517	0/0:26,0:26:46.43:0,46,529	0/0:17,0:17:30.40:0,30,347	0/0:23,0:23:52.55:0,53,555	0/0:25,0:25:42.48:0,42,510	0/0:28,0:28:60.56:0,61,593	1/1:21,0:21:12.13:72,12,0	0/0:26,0:26:24.04:0,24,231	0/0:29,0:29:19.23:0,19,146	0/0:23,0:23:37.26:0,37,204
chr10	4593879	.	T	TA	1519.61	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-9.510;DP=678;FS=0.536;HRun=8;HaplotypeScore=86.8018;InbreedingCoeff=0.9960;MQ=75.24;MQ0=1;MQRankSum=-0.347;QD=20.82;ReadPosRankSum=-0.187;VQSLOD=3.4746;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,134,751	0/0:12,0:12:36.01:0,36,326	0/0:18,0:16:25.85:0,26,202	0/0:19,0:16:18.37:0,18,168	0/0:19,0:19:45.01:0,45,405	0/0:21,0:21:63:0,63,569	0/0:25,0:25:72.02:0,72,653	0/0:32,0:32:89.97:0,90,803	0/0:24,0:24:69.01:0,69,623	0/0:31,0:31:84.03:0,84,766	0/0:22,0:22:57.02:0,57,517	0/0:16,0:16:42.02:0,42,384	0/0:18,0:18:45.01:0,45,408	0/0:18,0:18:48.01:0,48,434	1/1:4,23:27:48.14:556,48,0	0/0:22,0:22:51.01:0,51,463	0/0:32,0:32:83.99:0,84,752	1/1:2,18:20:45.13:517,45,0	0/0:30,0:30:72.02:0,72,656	0/0:20,0:20:54.03:0,54,494	0/0:8,0:8:23.99:0,24,214	0/0:32,0:32:62.46:0,62,744	0/0:18,0:18:48.02:0,48,439	0/0:30,0:30:77.89:0,78,676	1/1:2,24:26:51.15:590,51,0	0/0:37,0:37:99:0,102,912	0/0:32,0:31:78.02:0,78,705	0/0:14,0:14:35.82:0,36,314
chr10	4595343	.	TTGTA	T	2369.67	PASS	AB=0.819;AC=12;AF=0.231;AN=52;BaseQRankSum=8.686;DP=623;FS=16.146;HRun=0;HaplotypeScore=106.6406;InbreedingCoeff=0.7324;MQ=62.97;MQ0=9;MQRankSum=0.500;QD=18.51;ReadPosRankSum=1.046;VQSLOD=2.5223;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:43:14.69:0,15,227	0/0:7,0:7:21.07:0,21,491	./.	./.	0/0:30,0:30:51.18:0,51,1167	0/0:24,0:24:39.13:0,39,909	0/0:23,0:23:30.10:0,30,702	0/0:54,0:53:18.02:0,18,235	0/0:14,0:14:24.08:0,24,561	0/0:20,0:20:30.10:0,30,699	0/0:17,0:17:33.11:0,33,771	0/0:17,0:17:36.12:0,36,838	0/0:21,0:21:42.14:0,42,957	0/0:19,0:19:2.04:0,2,1006	1/1:7,13:20:30.10:461,30,0	0/0:15,0:22:36.11:0,36,726	0/0:15,0:25:33.09:0,33,564	1/1:5,8:14:27.08:390,27,0	0/0:23,0:29:24.07:0,24,392	0/1:14,0:14:25.06:25,0,399	0/0:30,1:31:11.06:0,11,1216	0/0:21,0:21:45.15:0,45,1048	0/0:16,0:16:30.09:0,30,655	0/0:31,0:31:54.17:0,54,1217	0/1:13,17:29:13.10:471,0,13	1/1:6,14:19:42.14:643,42,0	1/1:12,8:20:24.08:369,24,0	1/1:5,5:10:12.04:185,12,0
chr10	4595724	.	G	GGTCTGTGTAATGG	18398.28	PASS	AB=0.545;AC=17;AF=0.304;AN=56;BaseQRankSum=14.739;DP=730;FS=36.064;HRun=0;HaplotypeScore=283.3073;InbreedingCoeff=0.9099;MQ=81.46;MQ0=0;MQRankSum=-15.754;QD=70.49;ReadPosRankSum=0.662;VQSLOD=2.7418;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,0:31:28.06:1693,28,0	0/0:14,0:14:36.12:0,36,1403	0/0:22,0:22:63.10:0,63,1673	0/0:30,0:30:64.83:0,65,1732	0/0:26,0:26:69.20:0,69,2409	0/0:16,0:16:45.15:0,45,1549	0/0:27,0:27:69.20:0,69,2377	1/1:42,0:42:89.78:3453,90,0	0/0:29,0:29:78.24:0,78,2777	0/0:25,0:25:63.20:0,63,2219	0/0:18,0:18:54.15:0,54,1788	0/0:27,0:27:78.19:0,78,2562	0/0:24,0:24:69.21:0,69,2492	0/0:23,0:23:63.18:0,63,2021	1/1:10,1:53:71.97:3137,72,0	0/0:35,0:35:99:0,99,3422	1/1:7,0:29:40.33:2527,40,0	1/1:12,0:28:25.39:1443,25,0	0/0:18,0:18:51.16:0,51,1691	0/0:15,0:15:45.14:0,45,1630	0/0:55,0:55:99:0,153,5426	0/0:16,0:16:42.12:0,42,1568	0/0:18,0:18:45.15:0,45,1783	0/0:31,0:30:81.21:0,81,2819	1/1:7,0:23:35.95:1863,36,0	0/1:4,0:24:67.48:1513,0,67	1/1:8,0:26:44.11:2097,44,0	1/1:3,0:5:12.04:671,12,0
chr10	4595888	.	CTG	C	372.29	PASS	AB=0.902;AC=15;AF=0.268;AN=56;BaseQRankSum=3.691;DP=635;FS=0.721;HRun=0;HaplotypeScore=95.4381;InbreedingCoeff=-0.3594;MQ=61.84;MQ0=13;MQRankSum=3.966;QD=1.07;ReadPosRankSum=1.828;VQSLOD=1.4957;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:32:12.39:12,0,17	0/1:2,1:3:24.35:24,0,81	0/0:40,0:20:3.48:0,3,39	0/0:43,0:21:0:0,0,0	0/0:15,0:15:15.05:0,15,220	0/1:16,0:16:6.69:7,0,297	0/1:28,4:32:11.85:12,0,216	0/0:42,0:42:47.12:0,47,438	0/1:23,1:25:4.78:5,0,295	0/1:21,3:23:70.16:70,0,213	0/1:7,0:8:5.88:6,0,60	0/0:23,3:26:4.75:0,5,428	0/1:19,3:23:6.39:6,0,305	0/1:20,8:27:67.17:67,0,292	0/0:23,0:23:1.49:0,1,4	0/1:21,2:24:29.76:30,0,546	0/0:24,0:20:5.90:0,6,43	0/0:10,0:10:6.48:0,6,62	0/1:25,0:25:17.33:17,0,167	0/1:12,0:12:20.92:21,0,124	0/1:40,9:47:99:112,0,438	0/1:12,1:13:12.34:12,0,203	0/0:13,0:13:21.05:0,21,281	0/1:27,5:32:99:110,0,547	0/0:13,0:12:2.51:0,3,10	0/0:21,0:19:17.93:0,18,155	0/0:11,0:10:5.58:0,6,31	0/0:6,0:6:6.02:0,6,73
chr10	4595922	.	GTGT	G	429.57	PASS	AB=1.000;AC=10;AF=0.179;AN=56;BaseQRankSum=9.239;DP=652;FS=0.000;HRun=0;HaplotypeScore=97.2743;InbreedingCoeff=0.4499;MQ=62.63;MQ0=30;MQRankSum=-2.322;QD=2.84;ReadPosRankSum=-4.658;VQSLOD=-0.2527;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:30,7:35:30.04:225,30,0	0/0:8,0:8:20.80:0,21,289	0/0:61,0:19:50.61:0,51,666	0/0:68,0:29:77.92:0,78,1019	0/0:9,0:9:24.04:0,24,416	0/0:18,0:18:28.65:0,29,721	0/0:27,0:27:62.90:0,63,831	0/1:36,0:36:85.34:85,0,488	0/0:22,0:22:55.95:0,56,877	0/0:21,0:21:55.86:0,56,768	0/0:10,0:10:12.79:0,13,286	0/0:30,0:30:69.36:0,69,1087	0/0:21,0:21:47.77:0,48,782	0/0:21,0:20:44.76:0,45,714	1/1:22,0:22:17.52:148,18,0	0/0:22,0:22:59.06:0,59,1093	0/1:22,0:18:30.22:30,0,35	0/0:13,0:12:7.44:0,7,121	0/0:16,0:16:47.89:0,48,721	0/0:12,0:12:32.32:0,32,499	0/0:50,0:47:99:0,100,1503	0/0:13,0:13:26.81:0,27,342	0/0:17,0:17:45.62:0,46,756	0/0:36,0:36:77.41:0,77,1260	1/1:13,0:12:5.64:39,6,0	0/1:14,0:12:41.28:41,0,76	0/1:7,0:6:12.93:16,0,13	0/0:4,0:4:2.22:0,2,7
chr10	4595925	.	T	TTG	2220.95	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=2.979;DP=634;FS=0.000;HRun=0;HaplotypeScore=86.7847;InbreedingCoeff=0.9448;MQ=66.32;MQ0=29;MQRankSum=-4.402;QD=13.88;ReadPosRankSum=-3.726;VQSLOD=2.6837;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:12,22:33:23.99:250,24,0	0/0:8,0:8:18.05:0,18,224	0/0:61,0:18:50.67:0,51,620	0/0:69,0:33:86.18:0,86,1010	0/0:10,0:10:20.99:0,21,239	0/0:18,0:18:38.75:0,39,451	0/0:25,0:25:51.12:0,51,632	1/1:13,15:33:55.30:691,55,0	0/0:20,0:21:30.32:0,30,520	0/0:23,0:23:48.14:0,48,603	0/0:10,0:10:18.05:0,18,233	0/0:28,0:28:50.84:0,51,649	0/0:20,0:20:42.11:0,42,534	0/0:23,0:22:47.79:0,48,569	1/1:6,13:21:15.04:172,15,0	0/0:23,0:23:57.16:0,57,701	1/1:10,2:18:28.61:394,29,0	1/1:4,8:12:11.40:141,11,0	0/0:17,0:17:48.11:0,48,585	0/0:11,0:11:30.09:0,30,381	0/0:44,0:42:93.28:0,93,1160	0/0:11,0:11:15.04:0,15,186	0/0:16,0:16:38.80:0,39,500	0/0:33,0:34:74.90:0,75,924	1/1:1,8:13:9.03:105,9,0	1/1:2,8:13:37.67:466,38,0	1/1:5,0:5:13.29:171,13,0	1/1:0,2:2:3.01:38,3,0
chr10	4596300	.	CTT	C	2657.30	PASS	AB=0.944;AC=17;AF=0.304;AN=56;BaseQRankSum=9.972;DP=550;FS=2.740;HRun=14;HaplotypeScore=78.3499;InbreedingCoeff=0.8920;MQ=70.26;MQ0=1;MQRankSum=-0.819;QD=10.98;ReadPosRankSum=7.786;VQSLOD=2.1455;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,38:51:47.13:809,47,0	0/0:8,0:8:18.06:0,18,252	0/0:14,0:8:8.76:0,9,67	0/1:16,1:12:3.85:4,0,161	0/0:17,0:20:47.07:0,47,509	0/0:18,0:18:45.08:0,45,589	0/0:19,0:21:53.61:0,54,630	1/1:10,13:26:23.18:295,23,0	0/0:12,0:13:34.63:0,35,427	0/0:20,0:22:39.96:0,40,454	0/0:8,0:10:21.09:0,21,213	0/0:10,0:14:25.32:0,25,324	0/0:8,0:16:27.08:0,27,353	0/0:14,0:19:39.09:0,39,497	1/1:7,12:20:41.32:357,41,0	0/0:15,0:15:42.11:0,42,542	1/1:2,0:40:98.73:426,99,0	1/1:10,22:36:10.78:404,11,0	0/0:16,0:21:47.62:0,48,576	0/0:10,0:10:24.07:0,24,317	0/0:18,1:20:42.14:0,42,575	0/0:17,0:20:36.11:0,36,484	0/0:10,0:12:32.57:0,33,397	0/0:31,1:33:55.93:0,56,990	1/1:2,6:9:14.60:169,15,0	1/1:3,1:21:49.66:229,50,0	1/1:3,0:21:38.37:166,38,0	0/0:2,0:2:0:0,0,0
chr10	4597350	.	CTT	C	1455.53	PASS	AB=0.862;AC=20;AF=0.357;AN=56;BaseQRankSum=6.753;DP=508;FS=2.823;HRun=17;HaplotypeScore=72.3841;InbreedingCoeff=0.6655;MQ=67.17;MQ0=5;MQRankSum=1.564;QD=6.17;ReadPosRankSum=4.383;VQSLOD=-0.2447;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,1:31:55.54:267,56,0	0/0:7,0:9:19.55:0,20,193	0/0:46,0:13:19.20:0,19,160	0/1:29,0:16:12.53:13,0,50	0/1:10,1:13:0.98:1,0,162	0/0:9,0:9:23.99:0,24,240	0/1:11,1:13:3.22:3,0,164	1/1:7,17:27:38.39:377,38,0	0/0:18,0:18:28.50:0,29,311	0/0:13,0:13:27.04:0,27,312	0/0:14,0:16:41.46:0,41,426	0/0:25,0:26:44.33:0,44,515	0/0:14,0:17:35.47:0,35,411	0/0:12,0:11:20.62:0,21,201	1/1:8,7:17:8.37:98,8,0	0/0:15,0:17:44.50:0,45,531	1/1:7,19:29:49.47:396,49,0	1/1:6,17:23:35.78:285,36,0	0/0:16,0:22:38.78:0,39,399	0/0:16,0:16:24.91:0,25,220	0/0:17,0:17:36.07:0,36,425	0/0:6,0:7:17.19:0,17,163	0/0:15,0:15:36.04:0,36,384	0/0:12,0:12:20.92:0,21,208	1/1:3,9:12:6.58:107,7,0	1/1:14,0:21:3.54:57,4,0	0/1:8,1:17:12.71:32,0,13	1/1:0,0:2:3.11:8,3,0
chr10	4597817	.	C	CA	787.13	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-8.402;DP=673;FS=1.650;HRun=7;HaplotypeScore=64.4303;InbreedingCoeff=0.9966;MQ=82.44;MQ0=0;MQRankSum=-1.290;QD=26.24;ReadPosRankSum=-4.515;VQSLOD=2.3243;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,114,1101	0/0:9,0:9:27.04:0,27,260	0/0:28,0:28:65.96:0,66,608	0/0:20,0:20:48.05:0,48,450	0/0:21,0:21:54.08:0,54,521	0/0:26,0:26:69.07:0,69,657	0/0:38,0:38:99:0,102,976	1/1:5,25:30:75.20:882,75,0	0/0:24,0:24:69.10:0,69,661	0/0:28,0:28:75.09:0,75,712	0/0:15,0:15:33.05:0,33,319	0/0:17,0:17:39.05:0,39,376	0/0:28,0:28:78.11:0,78,746	0/0:20,0:20:60.08:0,60,573	0/0:36,0:36:99:0,99,956	0/0:29,0:29:81.13:0,81,782	0/0:34,0:34:96.13:0,96,920	0/0:22,0:22:63.10:0,63,608	0/0:16,0:16:42.06:0,42,406	0/0:29,0:29:78.12:0,78,753	0/0:22,0:22:57.05:0,57,538	0/0:16,0:16:45.07:0,45,435	0/0:26,0:26:72.08:0,72,683	0/0:19,0:19:57.09:0,57,550	0/0:20,0:20:54.06:0,54,511	0/0:20,0:20:54.08:0,54,522	0/0:30,0:30:75.11:0,75,724	0/0:8,0:8:24.02:0,24,226
chr10	4598532	.	CT	C	4222.69	PASS	AB=0.866;AC=20;AF=0.357;AN=56;BaseQRankSum=8.770;DP=596;FS=15.271;HRun=10;HaplotypeScore=71.8593;InbreedingCoeff=0.8510;MQ=82.21;MQ0=3;MQRankSum=-2.016;QD=16.96;ReadPosRankSum=3.023;VQSLOD=4.1251;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,27:32:60.41:661,60,0	0/1:7,2:9:5.01:5,0,171	0/1:29,3:26:9.81:10,0,301	0/0:32,0:29:46.35:0,46,421	0/0:18,1:19:25.09:0,25,505	0/0:24,0:24:69.17:0,69,749	0/0:13,0:13:30.08:0,30,332	1/1:8,24:32:38.76:559,39,0	0/0:12,0:12:30.08:0,30,332	0/0:23,0:23:69.18:0,69,756	0/0:13,1:14:33.08:0,33,357	0/0:19,0:19:51.11:0,51,547	0/0:23,0:23:63.16:0,63,688	0/0:19,0:19:51.14:0,51,564	1/1:3,24:27:65.98:573,66,0	0/0:28,0:29:84.02:0,84,885	1/1:5,21:26:59.97:521,60,0	1/1:4,16:20:39.45:339,39,0	0/0:23,0:23:42.11:0,42,457	0/0:18,0:18:49.38:0,49,534	0/0:16,0:16:42.09:0,42,453	0/0:19,1:21:33.92:0,34,569	0/0:11,1:13:7.04:0,7,306	0/0:24,3:27:11.06:0,11,570	1/1:2,17:19:47.99:417,48,0	1/1:2,19:21:26.81:462,27,0	1/1:2,18:20:44.99:390,45,0	1/1:0,11:11:32.99:287,33,0
chr10	4600147	.	CGT	C	2256.39	PASS	AB=0.783;AC=39;AF=0.750;AN=52;BaseQRankSum=1.830;DP=591;FS=1.749;HRun=0;HaplotypeScore=92.2290;InbreedingCoeff=0.3048;MQ=66.24;MQ0=6;MQRankSum=1.568;QD=4.82;ReadPosRankSum=4.167;VQSLOD=2.6362;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:41:14.20:70,14,0	1/1:5,4:9:5.97:66,6,0	0/0:25,0:17:2.88:0,3,15	./.	1/1:11,5:16:5.98:54,6,0	1/1:11,2:12:8.95:73,9,0	1/1:17,6:24:26.89:262,27,0	./.	0/1:15,10:25:0.91:176,0,1	0/1:15,9:24:26.84:131,0,27	1/1:9,5:14:1.85:89,2,0	1/1:22,3:25:9.28:99,9,0	1/1:12,10:25:32.59:304,33,0	1/1:17,1:18:3.01:33,3,0	1/1:15,0:23:2.84:14,3,0	1/1:12,4:15:9.02:99,9,0	1/1:23,0:30:8.52:42,9,0	1/1:12,0:17:11.36:56,11,0	0/1:16,1:18:1.47:91,0,1	1/1:6,6:12:12.03:131,12,0	0/1:36,5:42:60.79:168,0,61	0/1:12,7:20:28.07:71,0,28	1/1:10,0:8:3:26,3,0	1/1:18,14:33:32.92:342,33,0	1/1:6,0:12:2.80:13,3,0	0/0:11,0:16:21.02:0,21,216	0/0:15,0:15:23.93:0,24,257	0/0:12,0:16:12.01:0,12,112
chr10	4600430	.	A	AT	1377.69	PASS	AB=0.879;AC=15;AF=0.268;AN=56;BaseQRankSum=0.621;DP=407;FS=12.859;HRun=11;HaplotypeScore=56.3589;InbreedingCoeff=0.3651;MQ=71.41;MQ0=0;MQRankSum=-1.643;QD=8.50;ReadPosRankSum=-1.079;VQSLOD=0.5486;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,19:25:47.93:471,48,0	0/0:3,0:3:5.98:0,6,46	0/1:10,0:10:21.12:21,0,89	0/1:8,0:8:15.61:16,0,61	0/1:11,2:13:14.20:14,0,196	0/0:10,0:10:29.89:0,30,232	0/0:22,0:23:55.78:0,56,420	0/1:11,20:34:65.31:505,0,65	0/0:7,0:8:19.96:0,20,145	0/0:13,0:13:32.87:0,33,255	0/1:7,1:8:22.48:22,0,115	0/0:10,0:10:23.88:0,24,186	0/0:13,0:13:29.86:0,30,229	0/0:14,0:14:35.85:0,36,278	0/0:17,0:19:38.42:0,38,361	0/0:16,0:16:38.85:0,39,302	0/0:30,1:31:50.23:0,50,573	0/0:20,1:21:20.36:0,20,341	0/0:8,0:8:14.93:0,15,116	0/1:7,1:8:6.53:7,0,139	0/0:18,0:18:38.81:0,39,300	0/0:10,0:10:26.89:0,27,209	0/1:7,1:9:9.52:10,0,118	0/0:18,2:20:17.35:0,17,318	0/0:8,0:8:15.80:0,16,118	1/1:11,0:11:22.05:110,22,0	1/1:21,0:21:57.69:258,58,0	1/1:15,0:15:27.50:123,27,0
chr10	4600431	.	T	TTTG	2378.24	PASS	AB=0.900;AC=7;AF=0.125;AN=56;BaseQRankSum=-1.139;DP=411;FS=1.447;HRun=0;HaplotypeScore=71.5928;InbreedingCoeff=0.8111;MQ=72.29;MQ0=0;MQRankSum=-0.932;QD=41.00;ReadPosRankSum=1.376;VQSLOD=4.2088;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:54.13:0,54,325	0/0:3,0:3:6.02:0,6,102	0/0:10,0:10:19.05:0,19,269	0/1:8,0:9:10.85:11,0,86	0/0:13,0:13:35.98:0,36,547	0/0:10,0:10:30.10:0,30,510	0/0:23,0:23:69.20:0,69,1050	0/0:34,0:34:87.45:0,87,741	0/0:8,0:8:24.07:0,24,365	0/0:13,0:13:39.12:0,39,618	0/0:7,0:8:23.94:0,24,349	0/0:11,0:11:30.07:0,30,458	0/0:12,0:12:36.10:0,36,559	0/0:15,0:15:42.09:0,42,659	0/0:19,0:19:50.02:0,50,845	0/0:15,0:15:42.13:0,42,688	0/0:31,0:31:87.14:0,87,1391	0/0:21,0:21:60.03:0,60,908	0/0:8,0:8:21.07:0,21,334	0/0:8,0:8:23.95:0,24,372	0/0:18,0:18:48.14:0,48,740	0/0:10,0:10:27.09:0,27,458	0/0:9,0:9:20.94:0,21,321	0/0:21,0:21:54.03:0,54,833	0/0:8,0:8:19.26:0,19,278	1/1:3,9:12:30.06:543,30,0	1/1:1,21:22:66.23:1352,66,0	1/1:0,15:15:30.10:620,30,0
chr10	4600588	.	TC	T	1617.75	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=8.952;DP=300;FS=8.393;HRun=6;HaplotypeScore=37.2897;InbreedingCoeff=0.9093;MQ=83.49;MQ0=0;MQRankSum=-0.963;QD=24.89;ReadPosRankSum=1.719;VQSLOD=2.8031;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:51.17:0,51,671	0/0:6,0:6:18.06:0,18,237	0/0:14,0:13:24.15:0,24,328	0/0:11,0:10:19.01:0,19,184	0/0:8,0:8:21.07:0,21,276	0/0:13,0:13:39.11:0,39,498	0/0:6,0:6:18.03:0,18,207	0/0:38,0:38:84.10:0,84,1060	0/0:12,0:12:36.12:0,36,472	0/0:7,0:7:21.07:0,21,276	0/0:4,0:4:12.04:0,12,156	0/0:5,0:5:15.04:0,15,183	0/0:8,0:8:24.08:0,24,316	0/0:8,0:8:24.08:0,24,315	1/1:1,9:10:24.06:258,24,0	0/0:3,0:3:9.03:0,9,118	1/1:5,18:23:52.94:669,53,0	1/1:2,20:22:54.14:580,54,0	0/0:8,0:8:21.07:0,21,276	0/0:9,0:9:24.08:0,24,315	0/0:11,0:11:33.08:0,33,405	0/0:1,0:1:3.01:0,3,39	0/0:8,0:8:21.07:0,21,276	0/0:6,0:6:18.06:0,18,237	1/1:1,9:10:26.81:270,27,0	0/0:6,0:6:18.04:0,18,211	0/0:9,0:9:27.01:0,27,305	0/0:17,0:17:42.14:0,42,553
chr10	4600897	.	T	TGG	1612.57	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=9.140;DP=555;FS=3.906;HRun=1;HaplotypeScore=82.9684;InbreedingCoeff=0.9462;MQ=87.11;MQ0=0;MQRankSum=-4.517;QD=24.07;ReadPosRankSum=-0.678;VQSLOD=1.8825;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:38:80.86:614,81,0	0/0:6,0:6:18.05:0,18,267	0/0:23,0:23:54.10:0,54,831	0/0:21,0:21:39.65:0,40,711	0/0:13,0:13:36.12:0,36,578	0/0:30,0:30:90.31:0,90,1448	0/0:37,0:37:99:0,105,1677	0/0:24,0:24:4.47:0,4,261	0/0:13,0:13:39.08:0,39,583	0/0:17,0:17:51.15:0,51,748	0/0:14,0:14:42.14:0,42,668	0/0:32,0:32:93.29:0,93,1435	0/0:19,0:19:57.18:0,57,885	0/0:34,0:34:99:0,102,1545	0/0:18,0:18:50.33:0,50,339	0/0:15,0:15:39.13:0,39,632	0/0:26,0:26:52.40:0,52,479	0/0:24,0:24:71.37:0,71,507	0/0:21,0:21:57.17:0,57,908	0/0:4,0:4:12.04:0,12,193	0/0:46,0:46:99:0,132,2103	0/0:11,0:11:33.11:0,33,525	0/0:10,0:10:27.09:0,27,428	0/0:20,0:20:60.08:0,60,856	0/0:10,0:10:27.27:0,27,195	1/1:0,12:13:36.09:560,36,0	1/1:0,8:8:21.07:348,21,0	1/1:0,8:8:15.05:248,15,0
chr10	4601280	.	A	AGTTTGTTT	3519.01	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-2.449;DP=642;FS=0.599;HRun=0;HaplotypeScore=159.2152;InbreedingCoeff=0.9104;MQ=69.56;MQ0=0;MQRankSum=-6.498;QD=29.82;ReadPosRankSum=-3.147;VQSLOD=2.4916;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:78.26:0,78,1858	0/0:8,0:8:12.04:0,12,303	0/0:23,0:15:3.01:0,3,76	0/0:31,0:24:12.04:0,12,265	0/0:21,0:21:39.12:0,39,885	0/0:30,0:30:54.09:0,54,1244	0/0:22,0:22:30.07:0,30,563	1/1:25,0:33:26.84:223,27,0	0/0:24,0:24:48.16:0,48,1212	0/0:33,0:33:75.25:0,75,1810	0/0:23,0:23:54.15:0,54,1214	0/0:19,0:19:39.13:0,39,935	0/0:14,0:15:8.77:0,9,722	0/0:19,0:19:36.12:0,36,909	0/0:21,0:21:39.13:0,39,937	0/0:12,0:13:27.08:0,27,612	1/1:20,0:20:23.89:458,24,0	0/0:42,0:42:75.26:0,75,1815	0/0:17,0:17:21.06:0,21,433	0/0:16,0:16:30.07:0,30,607	0/0:12,0:12:18.06:0,18,454	0/0:20,0:20:45.15:0,45,1087	0/0:23,0:23:45.11:0,45,984	0/0:33,0:32:78.22:0,78,1913	0/0:16,0:16:39.12:0,39,861	1/1:10,11:25:45.15:1514,45,0	1/1:10,10:23:8.33:807,8,0	1/1:11,4:17:15.03:517,15,0
chr10	4601708	.	T	TTTTTC	2067.27	PASS	AB=1.000;AC=7;AF=0.135;AN=52;BaseQRankSum=6.256;DP=435;FS=35.035;HRun=0;HaplotypeScore=118.1170;InbreedingCoeff=0.1947;MQ=58.48;MQ0=14;MQRankSum=-7.504;QD=17.23;ReadPosRankSum=0.152;VQSLOD=1.5529;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:16,9:25:59.63:1077,60,0	0/0:11,0:10:27.56:0,28,484	0/0:25,0:14:21.92:0,22,359	0/0:10,0:6:18.02:0,18,211	0/0:23,0:21:45.10:0,45,659	0/0:9,0:8:21.50:0,22,291	0/0:26,0:26:46.58:0,47,1084	0/1:28,0:22:66.32:142,0,66	0/0:7,0:6:7.78:0,8,189	0/0:22,0:21:50.25:0,50,739	0/0:15,0:15:29.20:0,29,456	0/0:17,0:17:43.55:0,44,497	0/0:13,0:13:29.92:0,30,350	0/0:16,0:16:32.99:0,33,530	0/1:14,0:14:6.78:263,0,7	0/0:16,0:15:30.08:0,30,478	0/1:22,0:22:32.79:302,0,33	0/1:15,0:14:17.16:219,0,17	0/0:15,0:12:25.53:0,26,299	0/0:16,0:16:31.99:0,32,462	0/0:18,0:17:38.96:0,39,581	0/0:12,0:11:30.96:0,31,510	0/0:13,0:13:39.01:0,39,563	0/0:20,0:19:29.13:0,29,684	0/1:16,0:16:53.34:198,0,53	./.	0/0:6,0:1:2.80:0,3,13	./.
chr10	4601734	.	T	TC	1493.67	PASS	AB=1.000;AC=13;AF=0.271;AN=48;BaseQRankSum=5.291;DP=341;FS=22.065;HRun=1;HaplotypeScore=68.0766;InbreedingCoeff=0.9040;MQ=46.91;MQ0=19;MQRankSum=-6.259;QD=16.41;ReadPosRankSum=1.548;VQSLOD=2.4535;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,15:17:30.04:369,30,0	0/0:10,0:10:24.07:0,24,290	./.	0/1:4,0:4:6.64:8,0,7	0/0:18,0:17:35.86:0,36,403	0/0:12,0:11:18.04:0,18,217	0/0:28,0:26:57.09:0,57,673	1/1:10,6:11:18.06:245,18,0	0/0:14,0:12:23.90:0,24,272	0/0:14,0:13:36.04:0,36,405	0/0:15,0:15:39.11:0,39,479	0/0:17,0:17:39.01:0,39,450	0/0:13,0:13:33.03:0,33,373	0/0:14,0:14:23.98:0,24,256	1/1:1,15:16:27.09:378,27,0	0/0:13,0:12:12.03:0,12,143	1/1:7,6:11:17.99:228,18,0	1/1:4,5:7:17.98:210,18,0	0/0:14,0:12:27.07:0,27,331	0/0:8,0:8:21.03:0,21,252	0/0:9,0:8:18.04:0,18,206	0/0:15,0:14:30.06:0,30,337	0/0:9,0:9:20.98:0,21,249	0/0:19,0:19:54.12:0,54,648	1/1:3,8:11:18.05:233,18,0	./.	./.	./.
chr10	4601795	.	TAA	T	2203.35	PASS	AB=0.541;AC=11;AF=0.212;AN=52;BaseQRankSum=9.566;DP=407;FS=0.531;HRun=5;HaplotypeScore=58.0377;InbreedingCoeff=0.8014;MQ=60.07;MQ0=10;MQRankSum=-6.781;QD=23.19;ReadPosRankSum=1.627;VQSLOD=1.0192;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,13:10:18.06:252,18,0	0/0:4,0:4:12.04:0,12,220	0/0:17,0:12:33.04:0,33,521	0/0:10,0:9:24.08:0,24,413	0/0:17,0:17:48.08:0,48,806	0/0:16,0:16:45.15:0,45,816	0/0:26,2:26:24.29:0,24,1113	0/1:3,17:17:6.62:426,0,7	0/0:16,1:15:0.19:0,0,673	0/0:17,0:17:51.17:0,51,908	0/0:15,0:14:36.11:0,36,625	0/0:27,0:27:78.27:0,78,1426	0/0:19,0:19:57.20:0,57,1045	0/0:15,0:15:45.12:0,45,792	1/1:1,15:16:24.08:336,24,0	0/0:17,0:16:45.15:0,45,818	1/1:2,20:19:51.17:712,51,0	1/1:2,10:11:24.04:314,24,0	0/0:17,0:16:45.15:0,45,819	0/0:3,0:3:9.03:0,9,165	0/0:21,0:21:60.21:0,60,1100	0/0:15,0:15:45.15:0,45,825	0/0:11,0:11:33.11:0,33,596	0/0:23,0:23:66.23:0,66,1210	1/1:1,10:10:24.08:335,24,0	0/0:2,0:1:3.01:0,3,55	./.	./.
chr10	4601853	.	CGATAAT	C	4893.93	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=10.696;DP=498;FS=37.192;HRun=0;HaplotypeScore=122.6218;InbreedingCoeff=0.9971;MQ=70.15;MQ0=0;MQRankSum=-11.343;QD=58.96;ReadPosRankSum=-0.520;VQSLOD=2.8302;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,15:14:36.12:886,36,0	0/0:8,0:8:24.08:0,24,876	0/0:21,0:18:36.05:0,36,1472	0/0:15,0:11:33.11:0,33,818	0/0:17,0:17:48.16:0,48,1733	0/0:14,0:14:42.14:0,42,1513	0/0:35,0:35:99:0,102,3684	1/1:3,14:17:42.14:947,42,0	0/0:19,0:19:57.20:0,57,2075	0/0:17,0:17:48.16:0,48,1737	0/0:13,0:13:39.13:0,39,1428	0/0:23,0:23:69.24:0,69,2484	0/0:19,0:19:57.20:0,57,1991	0/0:18,0:18:54.19:0,54,1926	1/1:0,12:12:33.11:812,33,0	0/0:18,0:18:51.18:0,51,1869	1/1:3,10:13:30.10:732,30,0	1/1:3,11:14:33.11:780,33,0	0/0:29,0:29:84.29:0,84,3000	0/0:8,0:8:24.08:0,24,868	0/0:49,0:49:99:0,148,5350	0/0:17,0:17:51.18:0,51,1807	0/0:18,0:18:54.19:0,54,1976	0/0:19,0:19:57.20:0,57,2077	1/1:1,11:12:30.10:738,30,0	0/0:12,0:12:36.12:0,36,1226	0/0:19,0:18:54.18:0,54,1900	0/0:7,0:6:18.06:0,18,549
chr10	4601879	.	T	TTCCGAG	4072.01	PASS	AB=0.615;AC=5;AF=0.089;AN=56;BaseQRankSum=4.837;DP=519;FS=3.957;HRun=0;HaplotypeScore=145.4455;InbreedingCoeff=0.7766;MQ=68.66;MQ0=2;MQRankSum=-9.083;QD=96.95;ReadPosRankSum=0.604;VQSLOD=5.3043;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:24:54.16:0,54,1329	0/0:10,0:10:30.10:0,30,769	0/0:15,0:14:39.13:0,39,928	0/0:19,0:18:48.10:0,48,926	0/0:15,0:15:45.14:0,45,1062	0/0:16,0:16:42.14:0,42,1049	0/0:37,0:37:99:0,108,2525	0/0:18,0:18:42.10:0,42,984	0/0:14,0:14:36.11:0,36,871	0/0:15,0:15:45.13:0,45,1005	0/0:7,0:7:21.07:0,21,507	0/0:22,0:22:63.22:0,63,1548	0/0:17,0:17:51.18:0,51,1303	0/0:19,0:19:57.18:0,57,1408	0/0:14,0:14:30.10:0,30,762	0/0:27,0:27:75.26:0,75,1874	0/0:18,0:18:39.13:0,39,980	0/0:20,0:20:53.93:0,54,1237	0/0:25,0:25:66.22:0,66,1555	0/0:9,0:9:27.09:0,27,691	0/0:53,0:53:99:0,157,3803	0/0:17,0:17:39.13:0,39,985	0/0:15,0:15:39.13:0,39,936	0/0:19,0:19:57.18:0,57,1409	0/0:10,0:10:24.08:0,24,605	0/1:6,9:16:31.76:1369,0,32	1/1:3,13:18:51.08:1803,51,0	1/1:0,8:8:24.08:900,24,0
chr10	4602364	.	T	TCTTC	2022.43	PASS	AB=1.000;AC=10;AF=0.179;AN=56;BaseQRankSum=7.134;DP=435;FS=9.332;HRun=0;HaplotypeScore=110.2818;InbreedingCoeff=0.4499;MQ=58.05;MQ0=3;MQRankSum=-6.637;QD=14.45;ReadPosRankSum=3.230;VQSLOD=2.5602;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:27:18.11:18,0,115	0/0:5,0:5:14.81:0,15,138	0/0:11,0:9:14.04:0,14,128	0/0:12,0:5:5.21:0,5,99	0/0:19,0:18:45.01:0,45,470	0/0:12,0:12:35.98:0,36,376	0/0:14,0:13:35.99:0,36,400	0/0:42,0:42:48.68:0,49,466	0/0:11,0:11:26.94:0,27,262	0/0:19,0:19:57.08:0,57,699	0/0:17,0:17:45.11:0,45,651	0/0:10,0:10:27.01:0,27,305	0/0:9,0:9:24.03:0,24,262	0/0:9,0:9:23.62:0,24,260	0/1:17,0:17:36.96:76,0,37	0/0:14,0:14:33.08:0,33,447	0/1:28,0:26:99:198,0,157	0/0:9,0:9:11.48:0,11,81	0/0:16,0:15:35.83:0,36,310	0/0:10,0:10:1.33:0,1,121	0/0:6,0:6:11.96:0,12,98	0/0:14,0:14:35.93:0,36,451	0/0:11,0:11:33.02:0,33,393	0/0:24,0:22:36.23:0,36,448	0/1:22,0:22:13.98:159,0,14	1/1:22,2:24:68.26:942,68,0	1/1:13,1:15:27.22:489,27,0	1/1:5,2:7:21.04:301,21,0
chr10	4602388	.	T	TC	1683.18	PASS	AB=0.937;AC=17;AF=0.304;AN=56;BaseQRankSum=7.717;DP=461;FS=12.938;HRun=0;HaplotypeScore=79.3235;InbreedingCoeff=0.5900;MQ=47.92;MQ0=13;MQRankSum=-1.580;QD=7.87;ReadPosRankSum=4.618;VQSLOD=2.1110;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:23,1:23:27.52:232,28,0	0/0:5,0:5:10.97:0,11,73	0/1:18,0:6:8.49:8,0,13	0/0:28,0:9:7.97:0,8,90	0/0:15,0:13:20.87:0,21,165	0/0:13,0:13:23.33:0,23,158	0/0:16,0:15:34.76:0,35,254	1/1:2,36:38:91.66:666,92,0	0/0:8,0:8:14.71:0,15,124	0/0:20,0:20:51.21:0,51,413	0/0:23,0:23:22.94:0,23,303	0/0:12,0:12:25.64:0,26,189	0/0:10,0:10:18.23:0,18,136	0/0:8,0:8:19.17:0,19,130	0/1:20,2:20:10.97:33,0,11	0/0:17,0:17:40.34:0,40,317	1/1:16,6:20:33.60:228,34,0	0/1:8,0:8:30.16:31,0,30	0/0:15,0:13:31.94:0,32,220	1/1:11,0:9:15.44:119,15,0	0/0:3,0:3:5.90:0,6,43	0/0:18,0:18:41:0,41,369	0/0:12,0:11:31.16:0,31,221	0/0:24,0:22:36.98:0,37,283	1/1:6,3:24:11.97:79,12,0	0/1:23,2:24:1.21:292,0,1	0/1:13,3:16:28.30:96,0,28	1/1:4,2:4:11.94:90,12,0
chr10	4602390	.	T	TTTC	1375.30	PASS	AB=0.887;AC=13;AF=0.232;AN=56;BaseQRankSum=9.043;DP=460;FS=13.578;HRun=0;HaplotypeScore=93.5869;InbreedingCoeff=0.3856;MQ=47.10;MQ0=14;MQRankSum=-2.226;QD=7.43;ReadPosRankSum=4.221;VQSLOD=1.6784;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:29:35.41:217,35,0	0/0:5,0:5:11.90:0,12,87	0/0:20,0:6:0.68:0,1,29	0/0:30,0:10:13.32:0,13,119	0/0:15,0:13:14.89:0,15,99	0/0:13,0:13:23.89:0,24,160	0/0:15,0:14:29.35:0,29,224	1/1:38,0:38:3.66:245,4,0	0/0:8,0:8:13.37:0,13,109	0/0:20,0:20:47.41:0,47,369	0/0:22,0:22:36.37:0,36,270	0/0:12,0:12:25.97:0,26,183	0/0:10,0:10:9.64:0,10,125	0/0:8,0:8:15.24:0,15,112	0/1:7,14:22:25.33:91,0,25	0/0:16,0:16:33.31:0,33,307	0/1:21,0:19:18.50:194,0,18	0/1:8,0:8:8.88:9,0,29	0/0:15,0:13:34.26:0,34,237	0/0:11,0:9:24.38:0,24,211	0/0:3,0:3:3.41:0,3,19	0/0:16,0:16:34.40:0,34,325	0/0:12,0:11:26.34:0,26,201	0/0:24,0:22:37.84:0,38,265	1/1:12,0:16:17.72:181,18,0	0/1:25,0:25:34.24:324,0,34	0/1:14,0:16:49.07:160,0,49	1/1:4,0:4:11.99:118,12,0
chr10	4602516	.	TAA	T	703.20	PASS	AB=1.000;AC=7;AF=0.130;AN=54;BaseQRankSum=6.780;DP=315;FS=3.947;HRun=9;HaplotypeScore=47.0034;InbreedingCoeff=0.7766;MQ=82.84;MQ0=0;MQRankSum=-0.620;QD=16.74;ReadPosRankSum=1.579;VQSLOD=0.9921;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:27.09:0,27,443	0/0:5,0:5:15.05:0,15,246	0/0:9,0:9:11.40:0,11,140	0/1:12,0:12:8.74:9,0,211	0/0:14,0:14:36.12:0,36,591	0/0:17,0:17:51.17:0,51,837	0/0:17,0:17:44.89:0,45,691	0/0:13,0:13:27.09:0,27,443	0/0:7,0:7:21.07:0,21,345	0/0:6,0:6:18.05:0,18,274	0/0:3,0:3:6.02:0,6,98	0/0:13,0:13:33.11:0,33,542	0/0:11,0:11:24.08:0,24,394	0/0:14,0:14:39.13:0,39,628	0/0:11,0:11:18.06:0,18,295	0/0:10,0:10:27.08:0,27,420	0/0:26,0:25:57.19:0,57,935	0/0:9,0:9:15.05:0,15,246	0/0:10,0:11:29.57:0,30,416	0/0:5,0:5:15.05:0,15,246	0/0:12,0:12:33.11:0,33,542	0/0:5,0:5:12.04:0,12,195	0/0:5,0:5:12.04:0,12,197	0/0:30,0:30:72.20:0,72,1129	./.	1/1:4,7:11:21.06:245,21,0	1/1:1,10:11:30.09:350,30,0	1/1:0,7:7:21.06:244,21,0
chr10	4602554	.	A	AT	869.56	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=3.181;DP=252;FS=6.958;HRun=2;HaplotypeScore=41.5342;InbreedingCoeff=0.7184;MQ=88.50;MQ0=1;MQRankSum=-1.536;QD=10.23;ReadPosRankSum=0.525;VQSLOD=1.1814;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,12:15:2.37:8,2,0	0/0:3,0:3:5.96:0,6,45	0/0:17,0:17:2.53:0,3,141	0/0:11,0:13:11.36:0,11,112	0/0:6,0:6:6.78:0,7,39	0/0:12,0:12:19.48:0,19,167	0/0:11,0:11:20.95:0,21,173	1/1:10,2:11:33:300,33,0	0/0:8,0:8:20.85:0,21,157	0/0:4,0:4:5.98:0,6,49	0/0:1,0:1:2.96:0,3,19	0/0:8,0:8:20.54:0,21,152	0/0:7,0:7:20.87:0,21,160	0/0:16,0:16:38.22:0,38,288	1/1:0,8:8:8.93:81,9,0	0/0:7,0:7:20.90:0,21,163	1/1:20,0:20:42.38:289,42,0	1/1:0,7:7:3.01:42,3,0	0/0:7,0:7:17.98:0,18,152	0/0:2,0:2:5.99:0,6,49	0/0:17,0:16:36.06:0,36,266	0/0:2,0:2:5.94:0,6,43	0/0:1,0:1:3:0,3,25	0/0:24,0:24:44.05:0,44,363	1/1:1,2:2:4.52:24,5,0	1/1:8,2:10:23.89:187,24,0	1/1:3,2:5:8.99:77,9,0	1/1:5,0:4:5.96:43,6,0
chr10	4603705	.	G	GA	1435.61	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-7.389;DP=711;FS=5.735;HRun=9;HaplotypeScore=72.2528;InbreedingCoeff=0.9316;MQ=77.44;MQ0=0;MQRankSum=-0.359;QD=25.19;ReadPosRankSum=-0.534;VQSLOD=4.1647;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,114,990	0/0:10,0:10:29.98:0,30,257	0/0:19,0:18:32.94:0,33,283	0/0:15,0:18:5.38:0,5,159	0/0:36,0:36:86.95:0,87,753	0/0:29,1:30:44.78:0,45,614	0/0:29,0:29:74.94:0,75,647	0/0:15,0:15:41.72:0,42,347	0/0:19,0:19:41.93:0,42,352	0/0:28,0:28:71.97:0,72,625	0/0:16,1:17:8.55:0,9,291	0/0:32,0:32:86.97:0,87,755	0/0:26,0:26:71.98:0,72,625	0/0:31,0:31:80.94:0,81,699	0/0:28,0:28:80.96:0,81,699	0/0:24,0:24:56.92:0,57,486	0/0:40,0:40:95.91:0,96,825	0/0:21,0:21:59.92:0,60,510	0/0:23,0:23:62.47:0,62,543	0/0:24,1:25:38.73:0,39,554	0/0:40,1:42:67.79:0,68,798	0/0:22,1:23:26.74:0,27,451	0/0:24,0:24:62.97:0,63,543	0/0:26,1:27:47.80:0,48,644	0/0:24,1:25:26.76:0,27,452	1/1:2,27:29:81.19:879,81,0	1/1:2,19:21:48.13:531,48,0	1/1:0,7:7:15.04:166,15,0
chr10	4603871	.	AG	A	693.02	PASS	AB=0.762;AC=9;AF=0.161;AN=56;BaseQRankSum=14.738;DP=701;FS=4.186;HRun=3;HaplotypeScore=129.3673;InbreedingCoeff=-0.1902;MQ=57.55;MQ0=2;MQRankSum=-6.636;QD=2.57;ReadPosRankSum=2.324;VQSLOD=0.2830;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:31,10:40:9.24:9,0,899	0/0:6,0:6:9.03:0,9,130	0/0:12,0:6:14.87:0,15,157	0/0:9,0:8:14.34:0,14,146	0/0:24,0:24:72.20:0,72,992	0/0:22,0:22:66.22:0,66,943	0/0:35,0:35:99:0,99,1378	0/1:25,15:38:92.96:93,0,802	0/0:20,0:20:57.19:0,57,820	0/0:19,0:19:50.95:0,51,711	0/0:12,0:12:36.12:0,36,518	0/0:31,0:31:90.28:0,90,1260	0/0:31,0:31:93.29:0,93,1318	0/0:20,0:20:57.16:0,57,760	0/1:31,15:46:99:164,0,850	0/0:35,0:35:99:0,105,1483	0/1:34,6:40:9.20:9,0,936	0/1:14,7:21:56.06:56,0,441	0/0:19,0:16:42.14:0,42,596	0/0:16,0:16:48.16:0,48,690	0/0:59,0:59:99:0,169,2374	0/0:17,0:17:51.16:0,51,713	0/0:22,0:22:60.17:0,60,823	0/0:22,0:22:60.20:0,60,860	0/1:20,12:32:99:159,0,423	0/1:18,9:27:99:244,0,362	0/1:13,4:17:77.91:78,0,178	0/1:3,3:6:17.72:18,0,112
chr10	4603876	.	G	GA	2455.98	PASS	AB=0.752;AC=9;AF=0.161;AN=56;BaseQRankSum=14.309;DP=695;FS=0.369;HRun=0;HaplotypeScore=128.1510;InbreedingCoeff=-0.1939;MQ=56.23;MQ0=3;MQRankSum=-9.071;QD=9.16;ReadPosRankSum=2.195;VQSLOD=3.8573;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:31,11:41:99:308,0,853	0/0:4,0:4:12.04:0,12,168	0/0:12,0:7:16.87:0,17,202	0/0:10,0:9:17.95:0,18,194	0/0:20,0:20:57.19:0,57,797	0/0:22,0:22:66.22:0,66,923	0/0:38,0:38:99:0,111,1523	0/1:27,15:40:99:343,0,736	0/0:22,0:22:66.22:0,66,920	0/0:17,0:17:45.15:0,45,630	0/0:12,0:12:36.12:0,36,503	0/0:31,0:31:93.31:0,93,1297	0/0:31,0:31:93.30:0,93,1283	0/0:20,0:20:60.20:0,60,836	0/1:32,17:49:99:456,0,828	0/0:34,0:34:99:0,102,1425	0/1:28,6:34:99:173,0,827	0/1:12,7:19:99:143,0,404	0/0:22,0:17:48.16:0,48,662	0/0:16,0:16:45.15:0,45,628	0/0:58,0:57:99:0,160,2219	0/0:17,0:17:48.16:0,48,663	0/0:17,0:17:51.17:0,51,712	0/0:23,0:23:66.18:0,66,900	0/1:18,12:30:99:380,0,374	0/1:19,11:30:99:586,0,326	0/1:12,4:16:99:159,0,165	0/1:3,3:6:49.13:49,0,87
chr10	4605028	.	T	TGAATAGGCTGCAA	33138.72	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=1.020;DP=724;FS=17.084;HRun=0;HaplotypeScore=242.6236;InbreedingCoeff=0.9696;MQ=64.17;MQ0=0;MQRankSum=-18.643;QD=127.46;ReadPosRankSum=-4.817;VQSLOD=3.0413;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:22,16:49:99:5011,99,0	0/0:10,0:10:30.10:0,30,1006	0/0:7,0:7:15.45:0,15,394	0/0:9,0:9:2.78:0,3,352	0/0:17,0:17:51.18:0,51,1909	0/0:27,0:27:78.27:0,78,2919	0/0:37,0:37:99:0,111,4247	1/1:24,4:34:96.28:4494,96,0	0/0:33,0:33:93.31:0,93,3426	0/0:38,0:38:99:0,108,3975	0/0:10,0:10:30.09:0,30,1129	0/0:29,0:29:87.27:0,87,3163	0/0:29,0:29:87.28:0,87,3346	0/0:37,0:37:99:0,111,4279	1/1:18,12:32:84.16:4695,84,0	0/0:24,0:24:69.24:0,69,2798	1/1:17,10:31:63.22:3537,63,0	1/1:9,8:18:48.16:2713,48,0	0/0:27,0:27:81.28:0,81,2914	0/0:19,0:19:54.19:0,54,2091	0/0:37,0:37:99:0,108,4210	0/0:23,0:23:66.21:0,66,2509	0/0:20,0:20:57.20:0,57,2299	0/0:31,0:31:90.28:0,90,3368	1/1:15,4:22:57.07:2394,57,0	1/1:12,6:24:69.21:3230,69,0	1/1:16,13:36:84.15:5023,84,0	1/1:7,4:14:33.11:2042,33,0
chr10	4605504	.	G	GT	1701.02	PASS	AB=1.000;AC=14;AF=0.250;AN=56;BaseQRankSum=-5.368;DP=566;FS=5.008;HRun=7;HaplotypeScore=108.1608;InbreedingCoeff=0.7410;MQ=74.72;MQ0=1;MQRankSum=-2.039;QD=10.83;ReadPosRankSum=2.346;VQSLOD=2.0160;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:25:4.04:48,4,0	0/0:7,0:7:21.03:0,21,203	0/0:21,0:18:23.95:0,24,314	0/0:22,0:16:8.82:0,9,135	0/0:22,0:22:60.09:0,60,577	0/0:20,0:20:54.07:0,54,515	0/0:26,0:26:66.09:0,66,637	1/1:24,0:24:0.47:3,0,0	0/0:20,0:20:51.08:0,51,492	0/0:25,0:25:63.09:0,63,608	0/0:11,0:11:27.04:0,27,261	0/0:28,0:28:78.54:0,79,778	0/0:22,0:22:60.08:0,60,573	0/0:14,0:14:39.06:0,39,376	0/1:21,0:21:2.09:12,0,2	0/0:21,0:21:57.09:0,57,550	0/1:20,0:20:1.49:11,0,1	1/1:12,0:12:0.66:5,1,0	0/0:32,0:31:84.09:0,84,793	0/0:28,0:28:78.11:0,78,748	0/0:18,0:18:42.06:0,42,406	0/0:18,0:18:51.08:0,51,490	0/0:21,0:21:48.04:0,48,453	0/0:24,0:24:60.09:0,60,579	0/0:8,0:8:2.44:0,2,7	1/1:2,21:23:37.22:732,37,0	1/1:1,22:23:60.14:725,60,0	1/1:0,9:9:27.08:326,27,0
chr10	4605511	.	TG	T	1076.46	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=12.927;DP=516;FS=0.486;HRun=1;HaplotypeScore=98.5084;InbreedingCoeff=0.9829;MQ=71.45;MQ0=1;MQRankSum=-10.441;QD=15.83;ReadPosRankSum=3.604;VQSLOD=3.8786;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,9:15:30.69:220,31,0	0/0:9,0:9:27.01:0,27,320	0/0:22,0:17:33.09:0,33,356	0/0:17,0:10:10.16:0,10,173	0/0:21,0:21:62.53:0,63,782	0/0:21,0:21:63.13:0,63,758	0/0:24,0:24:72.20:0,72,919	1/1:0,8:8:23.86:174,24,0	0/0:18,0:18:54.10:0,54,680	0/0:24,0:24:72.22:0,72,924	0/0:14,0:14:42.08:0,42,490	0/0:28,0:28:80.93:0,81,1008	0/0:21,0:21:63.16:0,63,777	0/0:15,0:15:45.03:0,45,542	1/1:1,16:17:49.07:331,49,0	0/0:24,0:24:72.17:0,72,892	1/1:1,13:14:39.81:266,40,0	1/1:0,9:9:26.83:197,27,0	0/0:31,0:30:90.22:0,90,1098	0/0:27,0:27:81.21:0,81,1021	0/0:15,0:15:45.13:0,45,582	0/0:19,0:18:54.05:0,54,676	0/0:17,0:17:51.07:0,51,618	0/0:21,0:21:63.15:0,63,785	1/1:1,4:5:11.75:75,12,0	0/0:24,0:24:67.91:0,68,359	0/0:25,0:25:62.41:0,62,319	0/0:11,0:11:31.31:0,31,164
chr10	4605513	.	TTTTTGTTTTTTTA	T	5669.83	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=12.567;DP=519;FS=4.643;HRun=0;HaplotypeScore=209.7009;InbreedingCoeff=0.9830;MQ=70.60;MQ0=1;MQRankSum=-11.846;QD=84.62;ReadPosRankSum=4.208;VQSLOD=4.6573;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,9:15:10:812,10,0	0/0:10,0:10:30.10:0,30,1876	0/0:20,0:15:39.05:0,39,1465	0/0:18,0:11:27.04:0,27,859	0/0:21,0:21:63.22:0,63,4071	0/0:21,0:21:63.22:0,63,3862	0/0:24,0:24:72.25:0,72,4667	1/1:0,8:8:24.08:779,24,0	0/0:19,0:19:57.20:0,57,3593	0/0:24,0:24:72.25:0,72,4569	0/0:15,0:15:45.15:0,45,2803	0/0:28,0:28:84.25:0,84,4939	0/0:21,0:21:63.22:0,63,3636	0/0:16,0:16:48.16:0,48,2954	1/1:1,16:17:51.17:1558,51,0	0/0:25,0:25:75.26:0,75,4811	1/1:1,13:14:42.14:1267,42,0	1/1:0,9:9:27.09:879,27,0	0/0:30,0:29:84.29:0,84,4820	0/0:28,0:28:84.28:0,84,4889	0/0:16,0:16:48.16:0,48,3074	0/0:19,0:18:54.19:0,54,3331	0/0:16,0:16:48.16:0,48,2954	0/0:21,0:21:63.22:0,63,3712	1/1:0,4:4:12.04:374,12,0	0/0:24,0:24:72.25:0,72,4437	0/0:25,0:25:69.30:0,69,4536	0/0:11,0:11:33.11:0,33,2070
chr10	4606550	.	C	CATGG	7950.53	PASS	AB=0.647;AC=16;AF=0.286;AN=56;BaseQRankSum=-6.476;DP=677;FS=19.740;HRun=0;HaplotypeScore=256.0113;InbreedingCoeff=0.8183;MQ=81.63;MQ0=0;MQRankSum=-13.078;QD=47.61;ReadPosRankSum=-1.454;VQSLOD=3.5792;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,8:21:30.10:737,30,0	0/0:16,0:16:42.07:0,42,648	0/0:19,0:19:20.87:0,21,721	0/0:25,0:25:65.22:0,65,1056	0/0:30,0:30:81.28:0,81,1491	0/0:14,0:14:42.14:0,42,772	0/0:42,0:42:99:0,99,1756	1/1:13,6:18:36.11:722,36,0	0/0:30,0:30:87.26:0,87,1538	0/0:26,0:26:60.19:0,60,1075	0/0:18,0:18:45.15:0,45,827	0/0:41,0:41:99:0,105,1866	0/0:23,0:23:56.78:0,57,1047	0/0:25,0:25:69.21:0,69,1210	1/1:5,17:21:48.16:1263,48,0	0/0:30,0:30:75.26:0,75,1380	1/1:7,8:15:27.07:600,27,0	0/1:5,6:11:43.03:225,0,43	0/0:18,0:18:42.14:0,42,738	0/0:20,0:20:57.16:0,57,985	0/0:48,0:48:99:0,123,2207	0/0:26,0:26:60.19:0,60,1073	0/0:17,0:17:45.15:0,45,818	0/0:42,0:42:99:0,117,2089	1/1:4,6:8:15.03:299,15,0	0/1:19,23:41:57.42:2266,0,57	1/1:1,20:21:57.20:1501,57,0	1/1:1,4:5:15.02:338,15,0
chr10	4606611	.	C	CA	320.94	PASS	AB=0.876;AC=6;AF=0.111;AN=54;BaseQRankSum=5.453;DP=803;FS=2.851;HRun=1;HaplotypeScore=264.3084;InbreedingCoeff=0.2981;MQ=57.25;MQ0=12;MQRankSum=-6.909;QD=5.44;ReadPosRankSum=-1.176;VQSLOD=-0.1242;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:18,4:22:89.56:138,0,90	0/0:13,0:13:36.10:0,36,473	0/0:51,0:15:35.76:0,36,339	0/0:43,0:10:13.66:0,14,127	0/0:25,0:25:66.04:0,66,842	0/0:28,0:28:72.15:0,72,958	0/0:41,1:42:99:0,114,1559	1/1:4,1:3:6.02:86,6,0	0/0:27,0:28:30.73:0,31,827	0/0:41,0:40:99:0,112,1414	0/0:21,0:22:60.20:0,60,827	0/0:43,0:42:99:0,113,1472	0/0:25,0:25:69.12:0,69,884	0/0:34,0:34:99:0,102,1367	0/1:10,3:11:2.15:117,0,2	0/0:29,0:29:77.76:0,78,1025	0/1:8,0:7:32.63:33,0,35	0/1:9,2:9:46.95:69,0,47	0/0:18,0:16:45.08:0,45,578	0/0:23,0:22:63.12:0,63,826	0/0:86,0:85:99:0,216,2755	0/0:30,0:30:78.17:0,78,1043	0/0:26,0:26:52.22:0,52,690	0/0:68,0:67:99:0,183,2414	./.	0/0:39,0:38:93.20:0,93,1225	0/0:14,0:14:42.13:0,42,558	0/0:10,0:10:30.10:0,30,405
chr10	4606616	.	CAT	C	118.37	PASS	AB=0.963;AC=7;AF=0.125;AN=56;BaseQRankSum=7.391;DP=825;FS=15.590;HRun=0;HaplotypeScore=267.3751;InbreedingCoeff=0.2017;MQ=57.06;MQ0=12;MQRankSum=-6.267;QD=1.02;ReadPosRankSum=-2.827;VQSLOD=0.4670;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:21,1:23:34.52:35,0,130	0/0:12,0:12:33.11:0,33,612	0/1:51,1:15:47.17:47,0,366	0/0:46,1:14:23.47:0,23,263	0/0:21,0:21:57.13:0,57,953	0/0:27,0:27:63.22:0,63,1213	0/0:47,0:47:99:0,126,2247	1/1:5,0:3:2.50:9,2,0	0/0:31,0:31:71.60:0,72,1263	0/0:39,1:39:99:0,114,1983	0/0:23,0:23:63.19:0,63,1140	0/0:43,0:42:99:0,111,1930	0/0:27,0:27:75.21:0,75,1290	0/0:31,0:31:90.27:0,90,1654	0/1:12,0:10:12.44:47,0,12	0/0:29,0:29:75.23:0,75,1350	0/1:9,0:7:8.38:8,0,29	0/1:13,1:11:5.75:92,0,6	0/0:17,0:16:47.93:0,48,811	0/0:22,0:21:60.21:0,60,1134	0/0:92,0:91:99:0,225,3964	0/0:33,0:33:89.80:0,90,1478	0/0:28,0:28:72.19:0,72,1265	0/0:65,0:64:99:0,166,3081	0/0:5,0:4:0:0,0,0	0/0:41,0:40:99:0,105,1844	0/0:15,0:15:42.10:0,42,727	0/0:12,0:12:36.05:0,36,578
chr10	4606623	.	A	ACC	1134.32	PASS	AB=0.657;AC=8;AF=0.148;AN=54;BaseQRankSum=6.611;DP=833;FS=9.318;HRun=1;HaplotypeScore=255.8397;InbreedingCoeff=0.7638;MQ=57.43;MQ0=12;MQRankSum=-7.578;QD=18.30;ReadPosRankSum=-1.420;VQSLOD=-0.0356;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,7:22:41.46:612,41,0	0/0:12,0:12:36.02:0,36,529	0/0:58,0:21:9.87:0,10,362	0/0:50,0:12:15.51:0,16,230	0/0:18,0:18:45.12:0,45,645	0/0:25,0:25:63.18:0,63,958	0/0:47,0:47:99:0,129,1836	./.	0/0:32,0:34:82.05:0,82,1150	0/0:40,0:39:99:0,110,1613	0/0:24,0:24:65.39:0,65,983	0/0:45,0:44:99:0,117,1652	0/0:27,0:27:75.16:0,75,1075	0/0:30,0:30:90.25:0,90,1364	1/1:6,4:9:2.21:84,2,0	0/0:27,0:27:72.47:0,72,1065	0/1:3,4:7:1.94:269,0,2	1/1:10,5:12:7.22:300,7,0	0/0:19,0:18:51.11:0,51,754	0/0:23,0:22:60.12:0,60,885	0/0:94,0:93:99:0,245,3601	0/0:31,0:31:84.08:0,84,1176	0/0:28,0:28:78.11:0,78,1156	0/0:62,0:61:99:0,165,2503	0/1:3,2:4:0.06:0,0,0	0/0:40,0:39:99:0,102,1517	0/0:17,0:17:48.09:0,48,680	0/0:13,0:13:36.11:0,36,535
chr10	4606630	.	ACG	A	183.04	PASS	AB=0.824;AC=5;AF=0.093;AN=54;BaseQRankSum=7.780;DP=845;FS=23.180;HRun=0;HaplotypeScore=243.1859;InbreedingCoeff=0.2065;MQ=55.33;MQ0=13;MQRankSum=-5.911;QD=3.16;ReadPosRankSum=-2.728;VQSLOD=0.7410;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:21,4:25:99:136,0,323	0/0:13,0:13:36.05:0,36,617	0/0:58,0:15:20.74:0,21,412	0/0:55,1:14:12.18:0,12,285	0/0:17,0:17:26.88:0,27,673	0/0:24,0:24:63.08:0,63,1029	0/0:42,0:42:99:0,107,1961	./.	0/0:32,0:32:59.90:0,60,1346	0/0:40,0:39:99:0,107,1704	0/0:24,0:24:61.45:0,61,1122	0/0:45,1:45:99:0,118,2022	0/0:28,0:28:77.59:0,78,1229	0/0:33,0:33:95.87:0,96,1574	0/1:8,3:9:27.12:36,0,27	0/0:25,0:25:69.18:0,69,1163	0/0:11,0:9:11.95:0,12,189	0/1:11,3:11:99:102,0,193	0/0:20,0:19:56.68:0,57,942	0/0:22,0:21:56.99:0,57,930	0/0:100,1:100:99:0,265,4701	0/0:31,0:31:68.33:0,68,1139	0/0:28,0:28:75.13:0,75,1379	0/0:60,2:61:99:0,157,2676	1/1:7,1:7:2.97:20,3,0	0/0:41,0:40:76.66:0,77,1752	0/0:16,0:16:48.09:0,48,816	0/0:13,0:13:36.12:0,36,658
chr10	4606653	.	TACAC	T	1020.15	PASS	AB=0.807;AC=8;AF=0.143;AN=56;BaseQRankSum=8.133;DP=896;FS=13.231;HRun=0;HaplotypeScore=231.4247;InbreedingCoeff=0.3833;MQ=51.58;MQ0=27;MQRankSum=-8.794;QD=9.62;ReadPosRankSum=-2.598;VQSLOD=1.1490;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:20,6:25:1.01:279,0,1	0/0:14,0:14:30.08:0,30,670	0/0:67,0:9:11.75:0,12,141	0/0:63,0:13:4.68:0,5,164	0/0:17,0:17:34.33:0,34,708	0/0:21,0:21:51.11:0,51,1032	0/0:38,0:39:94.44:0,94,2117	0/1:13,5:16:99:126,0,196	0/0:31,0:32:82.72:0,83,1819	0/0:37,0:36:75.78:0,76,1679	0/0:24,0:24:56.97:0,57,1272	0/0:45,0:45:99:0,105,2358	0/0:31,0:31:90.19:0,90,2025	0/0:41,0:41:99:0,114,2408	0/1:12,3:13:28.31:197,0,28	0/0:25,0:25:57.15:0,57,1321	1/1:17,0:15:2.88:142,3,0	0/1:9,3:10:27.94:206,0,28	0/0:16,0:13:24.06:0,24,484	0/0:20,0:20:36.04:0,36,805	0/0:109,0:106:99:0,261,6012	0/0:35,0:35:83.83:0,84,1978	0/0:24,0:24:63.12:0,63,1474	0/0:54,0:52:99:0,101,2802	1/1:16,2:16:7.95:203,8,0	0/0:38,0:38:99:0,102,1983	0/0:23,0:22:51.18:0,51,1295	0/0:13,0:14:41.88:0,42,898
chr10	4606658	.	ACACACACACG	A	1863.08	PASS	AB=0.885;AC=7;AF=0.125;AN=56;BaseQRankSum=6.882;DP=935;FS=21.067;HRun=0;HaplotypeScore=313.9445;InbreedingCoeff=-0.0509;MQ=50.31;MQ0=28;MQRankSum=-8.384;QD=8.39;ReadPosRankSum=-2.996;VQSLOD=0.4481;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:28:99:155,0,396	0/0:14,0:14:27.09:0,27,1100	0/0:72,0:8:15.05:0,15,276	0/1:64,0:13:55.46:55,0,264	0/0:17,0:17:33.03:0,33,1414	0/0:21,0:21:51.16:0,51,1859	0/0:40,0:40:99:0,101,3878	0/0:22,0:18:37.12:0,37,423	0/0:31,0:32:78.53:0,79,3428	0/0:37,0:36:73.04:0,73,2839	0/0:24,0:24:60.21:0,60,2397	0/0:45,0:45:99:0,114,4678	0/0:34,0:34:96.33:0,96,3750	0/0:44,0:44:99:0,105,4723	0/1:12,5:15:93.46:194,0,93	0/0:25,0:25:63.22:0,63,2605	0/1:14,4:15:11.37:368,0,11	0/1:12,1:10:99:314,0,180	0/0:15,0:12:21.07:0,21,705	0/0:23,0:23:45.15:0,45,1706	0/0:111,0:108:99:0,229,11105	0/0:35,0:35:77.71:0,78,3630	0/0:25,0:24:63.05:0,63,2492	0/1:57,0:55:20.41:20,0,4919	0/1:11,10:19:4.72:886,0,5	0/0:41,0:40:99:0,99,3425	0/0:21,0:20:57.20:0,57,2409	0/0:14,0:14:39.13:0,39,1763
chr10	4606716	.	CCA	C	2143.84	PASS	AB=0.728;AC=5;AF=0.089;AN=56;BaseQRankSum=11.963;DP=1069;FS=2.610;HRun=0;HaplotypeScore=174.5788;InbreedingCoeff=-0.1065;MQ=50.66;MQ0=50;MQRankSum=-8.047;QD=9.16;ReadPosRankSum=1.126;VQSLOD=3.1104;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:37,22:53:99:453,0,952	0/0:7,0:7:18.05:0,18,257	0/0:81,0:9:7.55:0,8,99	0/0:82,0:9:12.36:0,12,114	0/0:24,0:23:60.20:0,60,977	0/0:13,0:13:39.13:0,39,652	0/0:37,0:38:99:0,101,1613	0/0:23,0:14:22.27:0,22,222	0/0:28,0:28:60.20:0,60,971	0/0:41,0:38:87.23:0,87,1387	0/0:15,0:15:42.14:0,42,700	0/0:53,0:54:99:0,135,2189	0/0:39,0:39:99:0,108,1743	0/0:43,0:43:99:0,101,1616	0/1:31,9:35:99:200,0,616	0/0:22,0:22:63.18:0,63,988	0/1:24,19:38:99:516,0,515	0/1:14,19:30:99:561,0,352	0/0:21,0:11:18.06:0,18,289	0/0:19,0:19:51.16:0,51,812	0/0:119,2:116:99:0,241,4440	0/0:31,1:30:43.18:0,43,1220	0/0:18,0:18:48.16:0,48,769	0/0:52,0:50:99:0,123,1988	0/1:40,18:56:99:532,0,787	0/0:33,0:32:83.76:0,84,1323	0/0:18,1:19:9.96:0,10,698	0/0:8,0:8:12.03:0,12,177
chr10	4606792	.	C	CG	143.36	PASS	AB=0.817;AC=6;AF=0.111;AN=54;BaseQRankSum=6.689;DP=779;FS=12.528;HRun=0;HaplotypeScore=113.3657;InbreedingCoeff=0.3020;MQ=54.85;MQ0=42;MQRankSum=-5.582;QD=3.33;ReadPosRankSum=-2.531;VQSLOD=1.6200;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:5,0:7:41.58:42,0,49	0/0:11,0:11:33.11:0,33,461	0/0:52,0:9:21.05:0,21,270	0/0:59,1:8:15.04:0,15,180	0/0:22,0:22:63.21:0,63,877	0/0:23,0:22:63.21:0,63,877	0/0:44,0:44:99:0,129,1711	./.	0/0:24,0:24:69.23:0,69,961	0/0:37,0:38:98.10:0,98,1453	0/0:16,0:16:48.16:0,48,664	0/0:44,0:44:99:0,114,1593	0/0:28,0:28:78.25:0,78,1082	0/0:27,0:27:75.25:0,75,1048	0/1:2,1:5:6.35:9,0,6	0/0:23,0:23:63.20:0,63,862	0/1:7,1:9:38.31:38,0,83	0/1:3,2:5:32.32:32,0,73	0/0:37,0:26:29.03:0,29,726	0/0:21,0:21:51.17:0,51,711	0/0:87,0:87:99:0,237,3212	0/0:27,0:26:75.25:0,75,1032	0/0:18,0:18:48.15:0,48,652	0/0:69,0:69:99:0,183,2473	1/1:2,8:11:23.13:149,23,0	0/0:31,0:29:81.22:0,81,1081	0/0:15,0:14:30.05:0,30,393	0/0:11,0:11:27.09:0,27,373
chr10	4606795	.	T	TAC	1681.84	PASS	AB=0.859;AC=11;AF=0.196;AN=56;BaseQRankSum=-0.109;DP=790;FS=13.500;HRun=0;HaplotypeScore=115.7024;InbreedingCoeff=0.7046;MQ=54.08;MQ0=45;MQRankSum=-5.204;QD=20.02;ReadPosRankSum=0.821;VQSLOD=3.4401;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,0:6:8.28:39,8,0	0/0:13,0:13:29.53:0,30,370	0/0:54,0:8:17.21:0,17,158	0/0:59,0:9:4.89:0,5,98	0/0:23,0:23:56.47:0,56,696	0/0:24,0:23:51.16:0,51,630	0/0:44,0:45:99:0,111,1311	0/1:6,0:2:0:0,0,0	0/0:23,0:23:59.91:0,60,715	0/0:37,0:38:95.65:0,96,1142	0/0:17,0:18:31.67:0,32,358	0/0:46,0:46:93.26:0,93,1125	0/0:26,0:26:54.15:0,54,641	0/0:28,0:28:66.21:0,66,817	0/0:7,0:6:0.88:0,1,4	0/0:24,0:24:60.17:0,60,729	0/1:5,0:8:0.73:19,0,1	1/1:5,0:4:4.24:27,4,0	0/0:38,1:28:57.88:0,58,606	0/0:23,0:23:40.35:0,40,468	0/0:90,0:90:99:0,192,2331	0/0:26,0:25:48.13:0,48,675	0/0:17,0:17:33.58:0,34,410	0/0:65,0:65:99:0,162,1978	0/0:12,0:11:0.85:0,1,5	1/1:16,14:28:26:900,26,0	0/1:4,10:14:2.98:407,0,3	1/1:0,11:11:27.09:442,27,0
chr10	4606798	.	A	AC	239.49	PASS	AB=0.939;AC=9;AF=0.161;AN=56;BaseQRankSum=10.116;DP=819;FS=7.253;HRun=1;HaplotypeScore=112.3738;InbreedingCoeff=0.4039;MQ=53.78;MQ0=44;MQRankSum=-5.064;QD=3.15;ReadPosRankSum=1.376;VQSLOD=-0.1027;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:9,0:7:4.98:33,0,5	0/0:14,0:14:42.14:0,42,542	0/0:54,0:6:15.85:0,16,171	0/0:62,0:9:9.18:0,9,180	0/0:22,0:22:66.21:0,66,854	0/0:25,0:24:63.14:0,63,815	0/0:44,0:44:99:0,126,1587	0/0:8,0:3:5.84:0,6,41	0/0:28,0:27:65.95:0,66,829	0/0:41,0:40:99:0,117,1489	0/0:18,0:18:53.91:0,54,662	0/0:47,0:47:99:0,123,1576	0/0:25,0:25:69.20:0,69,876	0/0:27,0:26:75.24:0,75,972	0/1:9,1:7:2.06:30,0,2	0/0:25,0:25:72.23:0,72,932	0/1:9,1:9:50.01:50,0,71	0/1:6,1:7:44.35:61,0,44	0/0:40,0:30:71.26:0,71,890	0/0:24,0:24:63.20:0,63,811	0/0:97,0:93:99:0,243,3029	0/0:26,0:25:75.22:0,75,948	0/0:18,0:18:51.12:0,51,639	0/0:66,0:65:99:0,180,2288	1/1:7,6:12:20.68:190,21,0	0/0:31,0:29:16.09:0,16,246	0/1:16,0:15:1.24:1,0,34	1/1:11,0:11:4.24:11,4,0
chr10	4606842	.	CACACACCACACAA	C	627.48	PASS	AB=0.959;AC=7;AF=0.130;AN=54;BaseQRankSum=5.827;DP=951;FS=6.885;HRun=0;HaplotypeScore=284.9302;InbreedingCoeff=0.3488;MQ=56.19;MQ0=41;MQRankSum=-3.736;QD=4.75;ReadPosRankSum=-3.976;VQSLOD=0.6952;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:12,0:13:27.08:0,27,1040	0/0:73,0:13:11:0,11,166	0/1:78,0:14:6.46:6,0,215	0/0:28,0:27:54.13:0,54,1804	0/0:27,0:27:66.21:0,66,2899	0/0:38,0:38:93.27:0,93,2666	0/0:24,0:21:21.04:0,21,336	0/0:28,0:27:53.73:0,54,2179	0/0:45,0:41:67.09:0,67,2142	0/0:14,0:14:30.09:0,30,1025	0/0:54,0:53:99:0,123,4338	0/0:30,0:30:69.22:0,69,2997	0/0:41,0:40:96.27:0,96,3311	1/1:8,13:18:2.76:66,3,0	0/0:30,0:30:63.22:0,63,2113	1/1:7,1:7:2.88:105,3,0	0/1:13,0:13:77.06:266,0,77	0/0:37,0:28:51.16:0,51,1767	0/0:26,0:26:63.20:0,63,2459	0/0:117,0:110:99:0,200,7590	0/0:22,0:22:48.02:0,48,1452	0/0:28,0:28:63.16:0,63,2343	0/0:63,0:62:99:0,136,5455	0/1:8,1:9:21.13:302,0,21	0/0:27,0:26:57.09:0,57,1574	0/0:17,0:16:24.08:0,24,1027	0/0:13,0:13:21.07:0,21,920
chr10	4606868	.	AAC	A	31.50	PASS	AB=0.961;AC=4;AF=0.071;AN=56;BaseQRankSum=4.042;DP=890;FS=1.256;HRun=0;HaplotypeScore=126.4011;InbreedingCoeff=0.3727;MQ=59.30;MQ0=24;MQRankSum=0.035;QD=0.44;ReadPosRankSum=-1.477;VQSLOD=2.4683;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,1:20:12.04:0,12,206	0/0:9,0:9:24.08:0,24,432	0/1:48,1:13:38.33:38,0,160	0/0:63,0:17:20.93:0,21,240	0/0:27,0:27:75.26:0,75,1331	0/0:28,0:28:84.27:0,84,1448	0/0:41,0:41:99:0,114,2004	1/1:4,2:5:6.02:84,6,0	0/0:26,0:25:72.23:0,72,1247	0/0:35,0:32:84.29:0,84,1491	0/0:18,0:18:51.16:0,51,873	0/0:49,0:49:99:0,138,2347	0/0:34,0:34:90.31:0,90,1599	0/0:43,0:43:99:0,126,2200	0/0:20,1:20:24.08:0,24,403	0/0:28,0:28:81.28:0,81,1419	0/0:16,0:14:25.89:0,26,399	0/1:15,1:16:12.44:12,0,363	0/0:31,0:28:69.24:0,69,1236	0/0:32,0:32:87.26:0,87,1467	0/0:111,2:109:99:0,287,4979	0/0:22,0:21:60.20:0,60,1035	0/0:23,0:23:57.19:0,57,992	0/0:70,1:71:99:0,168,3186	0/0:10,0:10:18.06:0,18,273	0/0:38,0:36:96.29:0,96,1668	0/0:12,0:12:27.09:0,27,486	0/0:7,0:7:21.07:0,21,375
chr10	4606958	.	T	TAC	3477.62	PASS	AB=0.782;AC=8;AF=0.143;AN=56;BaseQRankSum=9.570;DP=918;FS=4.669;HRun=0;HaplotypeScore=173.0497;InbreedingCoeff=-0.0647;MQ=54.12;MQ0=27;MQRankSum=-5.867;QD=13.80;ReadPosRankSum=3.021;VQSLOD=3.6121;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:35,24:57:99:1042,0,206	0/0:17,0:17:42.09:0,42,497	0/0:48,0:14:17.77:0,18,182	0/1:42,0:6:0.21:0,0,0	0/0:23,0:23:59.85:0,60,756	0/0:26,0:25:44.39:0,44,635	0/0:41,0:44:99:0,111,1258	0/1:19,0:10:20.18:20,0,128	0/0:23,0:21:42.11:0,42,517	0/0:38,0:37:99:0,102,1277	0/0:19,0:19:39.12:0,39,485	0/0:34,0:34:84.26:0,84,1053	0/0:22,0:21:39.12:0,39,492	0/0:29,0:29:64.43:0,64,778	0/1:10,18:27:17.80:769,0,18	0/0:29,0:29:75.22:0,75,930	0/1:13,18:30:99:625,0,132	0/1:15,13:27:99:620,0,200	0/0:35,0:31:55.03:0,55,655	0/0:14,0:14:36.11:0,36,453	0/0:124,0:123:99:0,273,3368	0/1:24,0:24:11.38:11,0,620	0/0:16,0:16:44.62:0,45,523	0/0:59,0:56:99:0,132,1628	0/1:8,13:17:42.59:390,0,43	0/0:38,0:33:81.19:0,81,987	0/0:11,0:11:27.09:0,27,338	0/0:14,0:14:42.13:0,42,527
chr10	4607012	.	AC	A	366.77	PASS	AB=0.787;AC=6;AF=0.107;AN=56;BaseQRankSum=6.843;DP=811;FS=4.484;HRun=2;HaplotypeScore=130.5165;InbreedingCoeff=-0.1271;MQ=49.51;MQ0=47;MQRankSum=-2.791;QD=3.25;ReadPosRankSum=-2.748;VQSLOD=-0.6866;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:28,8:32:60:60,0,295	0/0:14,0:13:26.45:0,26,348	0/0:25,0:3:6.02:0,6,71	0/0:34,0:6:9.91:0,10,103	0/0:26,0:23:53.54:0,54,728	0/0:21,0:21:43.91:0,44,519	0/0:46,1:45:99:0,119,1657	0/0:18,0:14:33.11:0,33,444	0/0:33,0:32:77.84:0,78,1025	0/0:40,1:36:87.20:0,87,1134	0/0:15,0:15:38.49:0,38,517	0/0:34,0:34:77.28:0,77,993	0/0:22,0:21:62.57:0,63,851	0/0:32,0:30:79.98:0,80,1071	0/1:7,8:14:38.88:58,0,39	0/0:31,0:31:86.71:0,87,1194	0/0:21,6:25:43.50:0,44,319	0/1:15,6:20:99:197,0,105	0/0:25,0:18:45.15:0,45,622	0/0:22,0:21:39.12:0,39,535	0/0:115,4:115:99:0,238,3575	0/0:25,0:22:44.17:0,44,591	0/0:19,0:18:42.14:0,42,591	0/0:52,2:49:88.79:0,89,1649	0/1:4,5:8:51.71:63,0,52	0/1:18,2:13:30.04:30,0,269	0/1:11,1:10:83.51:84,0,139	0/0:13,1:10:16.61:0,17,256
chr10	4607014	.	C	CAT	792.75	PASS	AB=0.964;AC=7;AF=0.125;AN=56;BaseQRankSum=10.193;DP=814;FS=12.542;HRun=0;HaplotypeScore=151.7448;InbreedingCoeff=0.2966;MQ=49.59;MQ0=45;MQRankSum=-7.847;QD=5.92;ReadPosRankSum=-0.554;VQSLOD=2.6011;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:37,0:33:62.58:63,0,203	0/0:13,0:12:26.98:0,27,300	0/0:22,0:3:6.02:0,6,80	0/0:32,0:8:11.46:0,11,100	0/0:25,0:22:56.51:0,57,643	0/1:22,0:22:7.17:7,0,393	0/0:46,0:44:99:0,129,1568	0/0:17,0:13:33.07:0,33,457	0/0:34,0:33:81.02:0,81,974	0/0:42,0:37:88.02:0,88,878	0/0:17,0:17:38.75:0,39,492	0/0:33,0:34:74.94:0,75,811	0/0:22,0:21:45.43:0,45,700	0/0:31,0:29:75.10:0,75,1015	0/1:14,1:14:1.36:139,0,1	0/0:32,0:32:93.09:0,93,1188	1/1:15,13:26:36.06:529,36,0	0/1:19,3:21:79.01:180,0,79	0/0:24,0:18:44.96:0,45,451	0/0:21,0:20:38.98:0,39,419	0/0:120,0:117:99:0,253,3112	0/0:27,0:24:48.04:0,48,564	0/0:19,0:18:41.99:0,42,503	0/0:53,0:48:92.44:0,92,1454	0/1:10,0:9:5.14:5,0,28	0/0:19,0:13:18.94:0,19,150	0/0:14,0:12:18.97:0,19,124	0/0:14,0:10:26.35:0,26,162
chr10	4607025	.	A	AC	349.06	PASS	AB=0.889;AC=6;AF=0.107;AN=56;BaseQRankSum=8.033;DP=832;FS=8.919;HRun=1;HaplotypeScore=132.0097;InbreedingCoeff=0.5229;MQ=51.52;MQ0=38;MQRankSum=-7.666;QD=6.23;ReadPosRankSum=-0.456;VQSLOD=-0.1810;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,1:30:25.83:0,26,335	0/0:11,0:10:26.98:0,27,325	0/0:26,0:10:27.08:0,27,334	0/0:36,0:17:36.08:0,36,459	0/0:25,0:23:53.96:0,54,646	0/0:27,0:27:48.93:0,49,583	0/0:49,0:47:99:0,129,1594	0/0:27,0:22:54.17:0,54,691	0/0:36,0:35:93.01:0,93,1126	0/0:44,0:39:99:0,108,1311	0/0:18,0:18:45.01:0,45,541	0/0:34,0:34:66.09:0,66,811	0/0:24,0:23:60.49:0,60,768	0/0:34,0:32:81.05:0,81,1000	1/1:12,1:11:14.99:179,15,0	0/0:33,0:33:90.29:0,90,1153	0/1:24,0:22:47.41:87,0,47	0/1:10,3:14:86.12:186,0,86	0/0:19,0:15:33.11:0,33,422	0/0:23,0:21:38.85:0,39,501	0/0:126,0:123:99:0,286,3487	0/0:29,0:26:53.90:0,54,672	0/0:22,0:21:48.15:0,48,612	0/0:51,0:48:99:0,118,1430	1/1:4,1:4:3.65:22,4,0	0/0:19,0:13:32:0,32,356	0/0:16,0:15:31.34:0,31,380	0/0:13,0:9:7.66:0,8,232
chr10	4607026	.	CA	C	191.24	PASS	AB=0.933;AC=3;AF=0.054;AN=56;BaseQRankSum=8.730;DP=837;FS=8.279;HRun=1;HaplotypeScore=129.1336;InbreedingCoeff=0.5718;MQ=51.66;MQ0=38;MQRankSum=-8.530;QD=5.17;ReadPosRankSum=0.889;VQSLOD=0.0730;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:29:32.39:0,32,500	0/0:11,0:10:25.90:0,26,350	0/0:27,0:11:33.11:0,33,431	0/0:36,0:17:45.11:0,45,604	0/0:24,0:22:54.80:0,55,752	0/0:27,0:27:49.96:0,50,651	0/0:50,0:48:99:0,136,1874	0/0:27,0:22:57.19:0,57,809	0/0:36,0:35:89.96:0,90,1254	0/0:43,0:38:99:0,112,1468	0/0:18,0:18:46.83:0,47,641	0/0:34,0:34:73.85:0,74,964	0/0:25,0:24:65.42:0,65,924	0/0:34,0:32:84.89:0,85,1215	0/0:13,0:11:13.84:0,14,139	0/0:33,0:33:99:0,99,1480	1/1:19,3:22:20.75:268,21,0	0/1:13,1:14:27.20:27,0,181	0/0:18,1:15:36.12:0,36,503	0/0:23,0:21:39.13:0,39,574	0/0:126,1:124:99:0,290,4010	0/0:30,0:27:58.99:0,59,839	0/0:22,0:21:47.92:0,48,683	0/0:51,0:48:99:0,122,1730	0/0:7,0:6:4.80:0,5,51	0/0:21,0:15:36.97:0,37,451	0/0:16,0:15:34.35:0,34,451	0/0:13,0:9:14.04:0,14,300
chr10	4607027	.	A	AC	545.97	PASS	AB=0.938;AC=4;AF=0.071;AN=56;BaseQRankSum=9.273;DP=833;FS=1.483;HRun=1;HaplotypeScore=129.4202;InbreedingCoeff=0.4319;MQ=51.08;MQ0=37;MQRankSum=-9.015;QD=10.50;ReadPosRankSum=2.425;VQSLOD=1.8979;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:29:28.15:0,28,292	0/0:12,0:11:26.98:0,27,325	0/0:25,0:11:33.10:0,33,415	0/0:33,0:16:45.11:0,45,572	0/0:24,0:22:56.97:0,57,688	0/0:27,0:27:47.46:0,47,541	0/0:49,0:47:99:0,138,1693	0/0:27,0:22:57.17:0,57,717	0/0:35,0:34:90.01:0,90,1101	0/0:43,0:39:99:0,111,1353	0/0:19,0:19:34.16:0,34,543	0/0:33,0:33:75.07:0,75,881	0/0:24,0:23:29.19:0,29,769	0/0:34,0:32:87.05:0,87,1063	0/1:14,0:12:32.40:32,0,83	0/0:33,0:33:99:0,99,1274	1/1:9,15:23:47.17:558,47,0	0/1:12,2:14:70.56:71,0,155	0/0:19,0:15:33.11:0,33,422	0/0:23,0:21:38.85:0,39,501	0/0:125,1:123:99:0,274,3392	0/0:30,0:27:59.91:0,60,735	0/0:22,0:21:45.13:0,45,562	0/0:52,0:49:99:0,121,1485	0/0:8,0:7:5.91:0,6,54	0/0:21,0:15:36.96:0,37,420	0/0:16,0:15:34.31:0,34,401	0/0:13,0:9:24.55:0,25,300
chr10	4607029	.	A	AC	249.45	PASS	AB=0.973;AC=5;AF=0.089;AN=56;BaseQRankSum=9.204;DP=830;FS=1.540;HRun=1;HaplotypeScore=130.5978;InbreedingCoeff=0.3383;MQ=51.35;MQ0=30;MQRankSum=-8.624;QD=2.83;ReadPosRankSum=3.025;VQSLOD=0.0301;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:31,3:30:5.27:5,0,285	0/0:11,0:10:29.99:0,30,362	0/0:23,0:11:33.10:0,33,405	0/0:34,0:18:45.11:0,45,574	0/0:26,0:24:59.95:0,60,700	0/0:27,0:27:41.40:0,41,535	0/0:48,0:47:99:0,138,1708	0/0:27,0:22:54.17:0,54,694	0/0:35,0:34:90.01:0,90,1106	0/0:42,0:38:99:0,111,1354	0/0:18,1:19:6.74:0,7,550	0/0:32,0:32:69.09:0,69,836	0/0:24,0:23:61.70:0,62,816	0/0:34,0:32:87.07:0,87,1076	0/1:14,0:13:35.15:35,0,98	0/0:33,0:33:99:0,99,1258	1/1:24,1:24:22.18:299,22,0	0/1:15,0:15:27.64:28,0,233	0/0:19,0:17:39.07:0,39,458	0/0:23,0:21:38.84:0,39,487	0/0:124,0:121:99:0,273,3407	0/0:30,0:27:59.92:0,60,750	0/0:21,0:20:45.15:0,45,578	0/0:53,0:50:99:0,124,1507	0/0:8,0:7:12.04:0,12,150	0/0:21,0:15:43.02:0,43,531	0/0:15,0:14:30.98:0,31,381	0/0:13,0:9:24.96:0,25,302
chr10	4607044	.	CATAT	C	2631.81	PASS	AB=0.943;AC=11;AF=0.196;AN=56;BaseQRankSum=2.227;DP=841;FS=7.346;HRun=0;HaplotypeScore=163.8270;InbreedingCoeff=0.7656;MQ=63.43;MQ0=15;MQRankSum=-2.906;QD=20.40;ReadPosRankSum=-2.109;VQSLOD=2.3585;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:57.19:0,57,1124	0/0:9,0:9:27.09:0,27,618	0/0:26,0:18:54.14:0,54,1209	0/0:43,0:30:83.04:0,83,1603	0/0:26,0:25:63.02:0,63,1391	0/0:32,0:32:69.24:0,69,1344	0/0:45,0:45:99:0,131,2932	0/0:39,0:35:96.27:0,96,1957	0/0:32,0:31:71.62:0,72,1913	0/0:35,0:34:99:0,100,1984	0/0:25,0:25:66.70:0,67,1452	0/0:31,0:31:69.22:0,69,1468	0/0:24,0:24:72.25:0,72,1604	0/0:36,0:35:99:0,102,2259	1/1:19,2:20:38.93:561,39,0	0/0:34,0:34:99:0,102,2503	0/1:27,0:26:82.86:290,0,83	0/1:11,2:13:1.05:228,0,1	0/0:17,0:17:48.15:0,48,880	0/0:25,0:24:51.14:0,51,1041	0/0:107,0:105:99:0,265,5807	0/0:26,0:25:66.21:0,66,1423	0/0:21,0:21:53.49:0,53,1098	0/0:48,0:47:99:0,132,2963	1/1:13,0:13:24.08:351,24,0	0/1:24,0:21:0.70:663,0,1	1/1:16,0:15:17.79:405,18,0	1/1:14,0:13:11.69:303,12,0
chr10	4607407	.	TAAGAACCAATATGCA	T	10216.93	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=14.016;DP=641;FS=3.247;HRun=0;HaplotypeScore=251.9087;InbreedingCoeff=0.9928;MQ=75.42;MQ0=0;MQRankSum=-13.540;QD=70.95;ReadPosRankSum=1.205;VQSLOD=4.5400;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,34:38:78.27:3324,78,0	0/0:12,0:12:36.12:0,36,2573	0/0:17,0:17:48.15:0,48,1994	0/0:11,0:11:27.08:0,27,741	0/0:25,0:25:72.25:0,72,5072	0/0:23,0:23:69.23:0,69,4846	0/0:26,0:26:78.27:0,78,5439	1/1:5,17:22:51.03:1687,51,0	0/0:18,0:18:54.19:0,54,3914	0/0:39,0:39:99:0,114,7895	0/0:18,0:18:48.16:0,48,3483	0/0:26,0:26:78.26:0,78,5165	0/0:22,0:22:66.23:0,66,4498	0/0:26,0:26:75.26:0,75,5232	1/1:2,24:26:54.19:2436,54,0	0/0:32,0:32:96.33:0,96,6504	1/1:2,21:23:27.09:1229,27,0	1/1:6,11:17:12.04:448,12,0	0/0:14,0:14:42.14:0,42,2405	0/0:17,0:17:51.15:0,51,3207	0/0:25,0:25:69.24:0,69,4844	0/0:21,0:21:63.22:0,63,4349	0/0:21,0:21:60.20:0,60,3672	0/0:33,0:33:93.31:0,93,6369	1/1:2,16:18:24.08:1092,24,0	0/0:32,0:32:96.32:0,96,6796	0/0:28,0:28:84.29:0,84,5845	0/0:11,0:11:33.11:0,33,2157
chr10	4609152	.	AACACACAC	A	2075.09	PASS	AC=8;AF=0.148;AN=54;BaseQRankSum=6.291;DP=710;FS=1.529;HRun=0;HaplotypeScore=166.2164;InbreedingCoeff=0.9587;MQ=64.70;MQ0=10;MQRankSum=-8.500;QD=21.62;ReadPosRankSum=3.283;VQSLOD=3.1730;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:26:14.11:0,14,403	0/0:10,0:11:18.05:0,18,491	./.	0/0:54,0:28:12.04:0,12,298	0/0:13,0:16:33.10:0,33,1012	0/0:19,0:20:24.07:0,24,850	0/0:30,0:31:54.11:0,54,1840	0/0:32,0:31:41.33:0,41,1229	0/0:32,0:36:75.26:0,75,2768	0/0:25,0:26:34.35:0,34,1024	0/0:12,0:15:24.55:0,25,816	0/0:15,0:19:39.13:0,39,1400	0/0:27,0:27:54.19:0,54,2010	0/0:18,0:21:36.12:0,36,1286	1/1:11,23:34:54.19:1293,54,0	0/0:31,0:33:54.63:0,55,1983	1/1:20,7:29:15.05:316,15,0	1/1:15,9:24:12.04:304,12,0	0/0:14,0:14:36.12:0,36,1158	0/0:10,0:10:21.07:0,21,693	0/0:45,0:48:69.18:0,69,2130	0/0:19,0:20:42.12:0,42,1257	0/0:13,0:13:24.08:0,24,905	0/0:44,0:50:81.28:0,81,2960	1/1:2,6:9:15.05:315,15,0	0/0:18,0:27:49.41:0,49,1686	0/0:8,0:15:18.06:0,18,629	0/0:2,0:9:18.06:0,18,645
chr10	4610413	.	CAGG	C	843.64	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.997;DP=794;FS=0.844;HRun=0;HaplotypeScore=107.4079;InbreedingCoeff=0.9871;MQ=85.98;MQ0=0;MQRankSum=-2.476;QD=36.68;ReadPosRankSum=-2.374;VQSLOD=3.7902;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,126,2721	0/0:10,0:10:27.09:0,27,596	0/0:25,0:25:63.22:0,63,1381	0/0:28,0:28:72.14:0,72,1425	0/0:22,0:22:54.17:0,54,1140	0/0:26,0:26:72.25:0,72,1588	0/0:43,0:43:99:0,117,2556	1/1:3,20:23:60.19:939,60,0	0/0:33,0:33:93.32:0,93,2037	0/0:27,0:27:72.23:0,72,1501	0/0:18,0:18:45.14:0,45,930	0/0:45,0:45:99:0,120,2619	0/0:24,0:24:72.25:0,72,1588	0/0:37,0:37:99:0,108,2351	0/0:26,0:26:75.24:0,75,1598	0/0:13,0:13:39.12:0,39,806	0/0:43,0:43:99:0,120,2645	0/0:40,0:40:99:0,114,2477	0/0:19,0:19:51.18:0,51,1126	0/0:21,0:21:60.21:0,60,1323	0/0:52,0:52:99:0,157,3331	0/0:35,0:35:96.32:0,96,2032	0/0:10,0:10:18.06:0,18,397	0/0:34,0:34:96.33:0,96,2115	0/0:25,0:25:72.72:0,73,1588	0/0:33,0:33:78.25:0,78,1631	0/0:25,0:25:75.23:0,75,1571	0/0:7,0:7:21.07:0,21,446
chr10	4611018	.	GTC	G	4953.07	PASS	AB=0.976;AC=14;AF=0.250;AN=56;BaseQRankSum=14.391;DP=911;FS=0.662;HRun=0;HaplotypeScore=151.6895;InbreedingCoeff=0.6132;MQ=60.31;MQ0=10;MQRankSum=-1.673;QD=18.90;ReadPosRankSum=-0.295;VQSLOD=4.5611;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:37,2:40:57.42:154,0,57	0/0:10,0:10:5.67:0,6,323	0/0:53,0:31:67.01:0,67,824	0/0:61,0:31:59.87:0,60,816	0/0:35,0:34:84.54:0,85,1525	0/0:16,0:16:36.39:0,36,729	0/0:38,0:38:99:0,108,1460	1/1:1,33:31:87.09:971,87,0	0/0:25,0:25:66.18:0,66,1077	0/0:48,0:47:99:0,122,2013	0/0:19,0:19:54.07:0,54,714	0/0:27,0:27:71.88:0,72,1131	0/0:23,0:23:36.50:0,37,826	0/0:30,0:30:81.14:0,81,1160	1/1:1,35:36:66.14:820,66,0	0/0:41,0:41:99:0,114,1734	1/1:10,17:27:75.02:893,75,0	1/1:5,20:24:69.20:917,69,0	0/0:37,0:34:96.67:0,97,1303	0/0:25,0:25:69.17:0,69,1066	0/0:61,0:61:99:0,165,2523	0/0:32,0:32:69.48:0,69,1273	0/0:22,0:22:63.11:0,63,964	0/0:46,0:46:99:0,101,1833	1/1:12,15:27:69.08:811,69,0	0/1:34,1:35:99:272,0,108	0/1:22,0:21:17.40:30,0,17	0/1:16,0:16:10.91:85,0,11
chr10	4611022	.	C	CTGTGTGTG	3111.15	PASS	AB=0.843;AC=9;AF=0.161;AN=56;BaseQRankSum=8.949;DP=940;FS=0.997;HRun=0;HaplotypeScore=267.7350;InbreedingCoeff=0.3347;MQ=58.93;MQ0=13;MQRankSum=-3.147;QD=14.34;ReadPosRankSum=0.340;VQSLOD=2.5253;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:18,0:39:72.79:85,0,73	0/0:10,0:10:24.05:0,24,588	0/0:55,0:32:90.09:0,90,1237	0/0:65,0:31:70.54:0,71,1284	0/0:38,0:37:99:0,99,2627	0/0:17,0:17:51.15:0,51,1313	0/0:37,0:37:99:0,111,2321	0/1:39,0:36:42.06:42,0,455	0/0:23,0:23:66.21:0,66,1692	0/0:48,0:47:99:0,138,3317	0/0:20,0:20:57.13:0,57,1139	0/0:25,0:25:72.24:0,72,1833	0/0:24,0:24:69.19:0,69,1633	0/0:28,0:28:84.18:0,84,1751	0/0:35,0:35:62.25:0,62,784	0/0:42,0:42:99:0,120,2823	0/1:28,0:28:24.24:24,0,719	0/0:25,0:24:48.16:0,48,931	0/0:41,0:38:99:0,109,2230	0/0:29,0:29:72.43:0,72,1683	0/0:59,0:59:99:0,165,4010	0/0:33,0:33:90.22:0,90,2103	0/0:21,0:21:63.20:0,63,1579	0/0:47,0:47:99:0,133,3166	0/1:28,0:28:57.56:58,0,723	0/1:9,28:40:99:1658,0,167	1/1:7,11:21:19.82:637,20,0	1/1:6,11:20:21.37:760,21,0
chr10	4611024	.	CTG	C	1403.11	PASS	AB=0.966;AC=12;AF=0.214;AN=56;BaseQRankSum=13.212;DP=946;FS=2.184;HRun=0;HaplotypeScore=166.9012;InbreedingCoeff=0.5316;MQ=58.19;MQ0=14;MQRankSum=-2.620;QD=5.73;ReadPosRankSum=1.016;VQSLOD=2.9155;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:68.80:0,69,717	0/1:11,1:12:6.21:6,0,330	0/1:53,1:31:18.23:18,0,287	0/0:65,1:29:37.04:0,37,421	0/0:37,1:37:62.90:0,63,1435	0/0:17,1:18:11.68:0,12,620	0/0:37,0:37:69.18:0,69,1039	0/1:40,0:37:99:230,0,130	0/0:24,0:24:63.20:0,63,973	0/0:45,1:45:74.79:0,75,1597	0/0:22,0:22:45.10:0,45,647	0/0:26,0:26:64.81:0,65,1017	0/1:23,1:24:36.02:36,0,651	0/0:28,0:28:57.13:0,57,855	1/1:36,0:36:42.13:342,42,0	0/0:42,0:42:93.25:0,93,1393	1/1:28,0:28:52.74:327,53,0	1/1:24,0:23:64.36:395,64,0	0/0:40,1:38:53.07:0,53,994	0/0:29,0:29:63.12:0,63,915	0/0:61,0:61:99:0,114,2056	0/0:32,1:33:47.79:0,48,1116	0/0:21,0:21:48.16:0,48,774	0/0:46,1:47:74.93:0,75,1604	1/1:27,0:27:2.47:215,2,0	0/0:40,0:40:51.83:0,52,514	0/0:21,0:20:17.80:0,18,144	0/0:21,0:20:11.39:0,11,191
chr10	4611190	.	G	GTCTCTCTC	3191.82	PASS	AB=0.924;AC=7;AF=0.125;AN=56;BaseQRankSum=-0.126;DP=946;FS=1.717;HRun=0;HaplotypeScore=273.6773;InbreedingCoeff=0.4857;MQ=65.61;MQ0=16;MQRankSum=-5.352;QD=13.94;ReadPosRankSum=-3.548;VQSLOD=2.0423;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:42.28:0,42,1422	0/0:13,0:13:33.10:0,33,795	0/1:51,0:23:22.71:23,0,96	0/1:108,0:52:23.24:23,0,151	0/0:25,0:27:63.17:0,63,1347	0/0:21,0:21:35.71:0,36,1010	0/0:36,0:36:66.19:0,66,1446	0/0:40,0:37:76.57:0,77,1558	0/0:35,0:36:83.09:0,83,1688	0/0:29,0:30:60.19:0,60,1461	0/0:28,0:30:69.18:0,69,1488	0/0:29,0:29:66.20:0,66,1513	0/0:26,0:26:39.37:0,39,1145	0/0:28,0:28:63.16:0,63,1442	0/0:40,0:40:90.19:0,90,1831	0/0:29,0:29:78.24:0,78,1853	0/0:24,0:24:33.56:0,34,753	0/0:22,0:22:27.75:0,28,882	0/0:32,0:30:53.16:0,53,1062	0/0:30,0:31:63.16:0,63,1487	0/0:40,0:41:75.98:0,76,1765	0/0:30,0:30:69.16:0,69,1457	0/0:24,0:26:45.09:0,45,884	0/0:50,0:53:36.04:0,36,1897	0/0:25,0:25:42.90:0,43,865	0/1:24,8:34:80.26:1772,0,80	1/1:14,8:22:47.97:1299,48,0	1/1:5,7:14:9.03:213,9,0
chr10	4611222	.	G	GTC	90.88	PASS	AB=0.973;AC=5;AF=0.089;AN=56;BaseQRankSum=8.206;DP=945;FS=0.758;HRun=0;HaplotypeScore=211.9848;InbreedingCoeff=0.3401;MQ=65.90;MQ0=14;MQRankSum=-7.005;QD=0.50;ReadPosRankSum=-2.465;VQSLOD=2.5015;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:34,1:35:18.85:19,0,109	0/0:15,0:15:36.08:0,36,449	0/0:54,0:35:56.41:0,56,616	0/1:103,0:49:7.56:8,0,297	0/0:39,0:39:96.14:0,96,1191	0/0:20,0:20:42.09:0,42,500	0/0:39,0:39:99:0,105,1256	0/0:47,0:46:43.89:0,44,454	0/0:39,0:39:87.26:0,87,1100	0/0:34,0:34:99:0,99,1206	0/0:24,0:24:63.17:0,63,787	0/0:30,0:30:84.22:0,84,1046	0/0:24,0:24:63.18:0,63,796	0/0:28,0:28:75.18:0,75,913	0/0:44,0:44:28.65:0,29,191	0/0:39,0:39:99:0,105,1225	1/1:23,2:25:18.36:136,18,0	0/1:17,1:18:46.45:46,0,63	0/0:36,0:36:94.91:0,95,1123	0/0:29,0:29:78.14:0,78,954	0/0:42,0:42:99:0,120,1476	0/0:26,0:26:72.17:0,72,875	0/0:21,0:21:54.15:0,54,672	0/0:51,0:51:95.15:0,95,1219	0/0:23,0:23:19.47:0,19,99	0/0:26,0:26:59.36:0,59,641	0/0:22,0:22:53.91:0,54,637	0/0:10,0:10:9.03:0,9,117
chr10	4611230	.	C	CTGTGTCTCTT	9688.99	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=5.746;DP=1008;FS=1.992;HRun=0;HaplotypeScore=324.4019;InbreedingCoeff=0.9677;MQ=65.10;MQ0=14;MQRankSum=-12.031;QD=42.68;ReadPosRankSum=-9.203;VQSLOD=2.1392;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:12,23:45:36.65:645,37,0	0/0:16,0:16:45.13:0,45,1211	0/0:57,0:38:13.44:0,13,1190	0/0:96,0:56:50.79:0,51,948	0/0:36,0:36:96:0,96,2898	0/0:18,0:18:36.12:0,36,1135	0/0:45,0:45:99:0,123,3143	1/1:16,25:63:99:4996,165,0	0/0:40,0:40:95.79:0,96,2770	0/0:39,0:39:99:0,108,2920	0/0:23,0:23:63.19:0,63,1881	0/0:32,0:32:87.26:0,87,2560	0/0:28,0:28:72.17:0,72,2003	0/0:28,0:28:81.24:0,81,2251	1/1:9,27:41:78.27:1648,78,0	0/0:36,0:37:99:0,105,2862	1/1:8,16:32:5.32:676,5,0	1/1:17,2:19:34.46:973,34,0	0/0:38,0:38:99:0,105,2897	0/0:31,0:31:87.27:0,87,2422	0/0:44,0:44:99:0,120,3598	0/0:26,0:26:72.25:0,72,2146	0/0:25,0:25:60.14:0,60,1642	0/0:49,0:49:99:0,108,3096	1/1:4,18:27:42.14:751,42,0	0/0:31,0:31:69.14:0,69,1633	0/0:22,0:22:57.04:0,57,1546	0/0:14,0:14:15:0,15,336
chr10	4611416	.	GTCTCTC	G	1645.02	PASS	AB=0.682;AC=9;AF=0.161;AN=56;BaseQRankSum=8.020;DP=838;FS=4.152;HRun=0;HaplotypeScore=185.6612;InbreedingCoeff=0.5772;MQ=59.73;MQ0=21;MQRankSum=1.987;QD=9.56;ReadPosRankSum=-0.559;VQSLOD=2.5615;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:19,16:35:8.73:176,9,0	0/0:9,0:9:24.08:0,24,725	0/0:53,0:14:26.64:0,27,334	0/0:89,0:25:29.09:0,29,677	0/0:30,0:33:69.13:0,69,1680	0/0:25,0:25:54.18:0,54,1519	0/0:25,0:28:62.22:0,62,1719	1/1:22,24:45:72.17:1246,72,0	0/0:31,0:33:69.21:0,69,1990	0/0:32,0:32:75.26:0,75,2075	0/0:22,0:24:57.18:0,57,1442	0/0:22,0:23:57.20:0,57,1743	0/0:13,0:16:36.12:0,36,919	0/0:21,0:21:45.15:0,45,1417	1/1:3,0:24:3.77:12,4,0	0/0:27,0:27:72.23:0,72,2079	0/1:21,8:29:33.76:284,0,34	0/1:6,0:21:1.51:2,0,79	0/0:25,0:25:45.10:0,45,1046	0/0:27,0:28:63.21:0,63,1696	0/0:28,0:28:72.22:0,72,1949	0/0:29,0:31:60.19:0,60,1522	0/0:23,0:23:50.91:0,51,1233	0/0:43,0:45:99:0,103,2740	0/1:9,1:17:12.18:65,0,12	0/0:11,0:29:68.62:0,69,1581	0/0:11,0:33:44.16:0,44,1084	0/0:4,0:9:18.06:0,18,518
chr10	4611776	.	C	CG	652.27	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-6.079;DP=602;FS=5.381;HRun=3;HaplotypeScore=61.4447;InbreedingCoeff=0.9891;MQ=79.85;MQ0=0;MQRankSum=0.317;QD=32.61;ReadPosRankSum=-5.270;VQSLOD=1.3159;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,120,1408	0/0:8,0:8:18.05:0,18,215	0/0:12,0:12:34.85:0,35,359	0/0:25,0:24:41.36:0,41,578	0/0:27,0:27:75.12:0,75,853	0/0:25,0:25:72.22:0,72,862	0/0:38,0:38:99:0,102,1212	1/1:0,20:20:60.08:747,60,0	0/0:17,0:17:51.13:0,51,585	0/0:27,0:27:75.13:0,75,860	0/0:18,0:18:51.11:0,51,594	0/0:33,0:33:99:0,99,1133	0/0:21,0:21:50.50:0,50,569	0/0:11,0:11:30.05:0,30,341	0/0:22,0:22:66.18:0,66,769	0/0:21,0:21:60.18:0,60,718	0/0:21,0:21:57.12:0,57,654	0/0:22,0:22:57.12:0,57,666	0/0:18,0:18:36:0,36,409	0/0:25,0:25:69.17:0,69,809	0/0:35,0:35:96.27:0,96,1135	0/0:21,0:21:60.12:0,60,680	0/0:19,0:19:54.17:0,54,645	0/0:19,0:19:54.15:0,54,634	0/0:15,0:15:45.10:0,45,523	0/0:21,0:21:63.18:0,63,735	0/0:12,0:10:36.11:0,36,430	0/0:8,0:8:24.02:0,24,270
chr10	4612180	.	GTGTGTGTA	G	855.92	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=-1.702;DP=642;FS=0.000;HRun=0;HaplotypeScore=162.6794;InbreedingCoeff=0.7618;MQ=66.87;MQ0=6;MQRankSum=-4.626;QD=13.59;ReadPosRankSum=-2.840;VQSLOD=2.3255;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:80.67:0,81,626	0/0:10,0:10:22.86:0,23,489	0/0:27,0:20:34.78:0,35,307	0/0:42,0:25:39.55:0,40,381	0/0:16,0:16:41.17:0,41,1017	0/0:26,0:26:53.16:0,53,1028	0/0:28,0:28:49.51:0,50,950	1/1:21,0:21:44.29:365,44,0	0/0:14,0:14:23.49:0,23,405	0/0:37,0:36:80.91:0,81,1280	0/0:9,0:9:15.02:0,15,405	0/0:18,0:18:32:0,32,876	0/0:20,0:19:34.10:0,34,528	0/0:22,0:22:47.95:0,48,374	0/0:31,0:31:68.52:0,69,965	0/0:23,0:23:46.26:0,46,1027	0/0:30,0:29:41.12:0,41,657	0/0:24,0:23:52.16:0,52,1154	0/0:18,0:18:50.93:0,51,841	0/0:21,0:21:43.31:0,43,944	0/0:50,0:49:99:0,108,1991	0/0:26,0:26:59.75:0,60,1197	0/0:6,0:6:12.61:0,13,85	0/0:26,0:26:51.05:0,51,1288	0/0:20,0:20:38.71:0,39,472	0/1:17,0:17:54.32:350,0,54	1/1:1,18:19:5.72:163,6,0	1/1:6,0:6:8.97:114,9,0
chr10	4612188	.	A	ATG	571.25	PASS	AB=0.986;AC=18;AF=0.346;AN=52;BaseQRankSum=-1.504;DP=642;FS=0.917;HRun=0;HaplotypeScore=104.7295;InbreedingCoeff=0.2035;MQ=58.57;MQ0=8;MQRankSum=-0.025;QD=1.68;ReadPosRankSum=-0.507;VQSLOD=2.0761;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:33:0:0,0,0	0/0:13,0:13:12.59:0,13,102	./.	./.	0/0:19,0:19:7.80:0,8,207	0/0:23,0:23:11.51:0,12,102	0/0:27,0:29:10.36:0,10,92	1/1:22,0:21:5.64:27,6,0	0/0:13,0:14:8.44:0,8,59	0/1:32,1:33:22.52:23,0,85	0/0:11,0:11:12.34:0,12,93	0/1:20,1:21:27.39:27,0,83	0/0:19,0:17:1.07:0,1,64	0/0:21,0:21:0:0,0,0	1/1:29,0:29:9.01:101,9,0	0/0:18,0:22:17.71:0,18,147	0/1:28,0:30:10.54:11,0,11	1/1:22,0:20:23.98:268,24,0	0/1:21,0:20:13.16:13,0,66	0/0:20,0:20:23.33:0,23,178	0/1:52,0:51:52.78:69,0,53	0/1:24,1:25:54.81:55,0,95	0/1:9,0:9:9.71:16,0,10	0/0:27,0:29:18.74:0,19,174	1/1:13,9:22:6.02:88,6,0	1/1:20,0:20:3:26,3,0	0/0:19,0:19:2.92:0,3,23	0/0:5,0:4:0:0,0,0
chr10	4613282	.	TACATACACAC	T	4091.92	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=8.637;DP=655;FS=3.336;HRun=0;HaplotypeScore=192.3650;InbreedingCoeff=0.8486;MQ=66.81;MQ0=0;MQRankSum=-9.285;QD=33.54;ReadPosRankSum=3.349;VQSLOD=2.9250;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:25:95.52:96,0,304	0/0:8,0:8:21.07:0,21,903	0/0:33,0:31:52.57:0,53,1735	0/0:29,0:23:61.56:0,62,1530	0/0:27,0:27:75.20:0,75,3183	0/0:21,0:21:57.16:0,57,2485	0/0:29,0:29:75.17:0,75,2810	0/0:28,0:28:72.15:0,72,1676	0/0:35,0:35:94.49:0,94,3983	0/0:29,0:29:84.18:0,84,2897	0/0:14,0:14:41.76:0,42,1650	0/0:32,0:32:90.20:0,90,3337	0/0:17,0:17:51.18:0,51,2342	0/0:15,0:15:33.10:0,33,1369	1/1:2,25:28:42.14:1353,42,0	0/0:22,0:22:63.16:0,63,2765	1/1:1,22:25:39.13:1188,39,0	1/1:1,22:23:24.08:779,24,0	0/0:17,0:17:51.01:0,51,1159	0/0:21,0:21:57.14:0,57,2243	0/0:38,0:38:99:0,108,3787	0/0:22,0:22:60.10:0,60,2091	0/0:21,0:21:54.14:0,54,2070	0/0:29,0:29:75.10:0,75,3058	1/1:4,16:20:12.10:676,12,0	0/0:19,0:19:13.24:0,13,1366	0/0:19,0:18:40.38:0,40,879	0/0:8,0:8:15.05:0,15,398
chr10	4613284	.	CAT	C	2273.37	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=12.317;DP=648;FS=4.785;HRun=0;HaplotypeScore=101.3909;InbreedingCoeff=0.9878;MQ=65.27;MQ0=1;MQRankSum=-5.260;QD=13.69;ReadPosRankSum=4.066;VQSLOD=3.4355;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:25:16.93:141,17,0	0/0:7,0:7:21.04:0,21,311	0/0:32,0:30:41.32:0,41,862	0/0:29,1:23:50.85:0,51,644	0/0:28,0:28:28.45:0,28,1033	0/0:20,0:20:29.28:0,29,782	0/0:29,0:29:53.61:0,54,994	0/0:27,0:27:44.88:0,45,525	0/0:34,0:34:70.59:0,71,1340	0/0:29,0:29:84.13:0,84,1136	0/0:14,0:14:41.76:0,42,636	0/0:32,0:32:75.47:0,75,1231	0/0:19,0:19:38.01:0,38,799	0/0:14,0:14:22.98:0,23,423	1/1:26,0:26:41.69:300,42,0	0/0:21,0:21:63.16:0,63,1072	1/1:24,0:24:38.65:273,39,0	1/1:23,0:23:23.78:167,24,0	0/0:18,0:17:50.89:0,51,548	0/0:20,0:20:56.83:0,57,821	0/0:38,0:38:97.07:0,97,1416	0/0:22,0:22:49.97:0,50,758	0/0:21,0:21:21.34:0,21,669	0/0:27,0:27:74.97:0,75,1137	1/1:18,0:18:11.88:140,12,0	1/1:1,19:20:41.94:711,42,0	1/1:4,16:20:39:518,39,0	1/1:0,8:8:15.05:229,15,0
chr10	4613286	.	TAC	T	1108.50	PASS	AB=0.903;AC=19;AF=0.339;AN=56;BaseQRankSum=12.664;DP=654;FS=0.441;HRun=0;HaplotypeScore=105.4960;InbreedingCoeff=0.4573;MQ=64.40;MQ0=1;MQRankSum=-4.608;QD=3.89;ReadPosRankSum=3.341;VQSLOD=2.2025;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:25:8.97:0,9,74	0/0:7,0:7:15.05:0,15,230	0/0:32,0:30:17.82:0,18,192	0/0:30,0:23:20.25:0,20,325	0/1:25,4:29:69.30:69,0,772	0/1:17,3:21:21.15:21,0,561	0/1:24,4:28:18.12:18,0,644	0/0:27,0:27:30.29:0,30,396	0/1:31,2:34:0.05:0,0,887	0/0:28,0:28:39.13:0,39,603	0/0:15,0:15:29.62:0,30,466	0/0:29,2:32:28.47:0,28,825	0/0:19,0:19:29.24:0,29,588	0/1:12,2:14:13.58:14,0,255	1/1:26,0:26:39.80:196,40,0	0/0:22,0:22:54.17:0,54,816	1/1:24,0:24:33.65:162,34,0	1/1:22,0:22:21.92:104,22,0	0/0:18,0:17:18.05:0,18,258	0/0:20,0:20:36.12:0,36,550	0/0:38,1:41:40.55:0,41,985	0/0:20,2:22:1.45:0,1,452	0/1:17,3:20:58.72:59,0,477	0/0:29,0:29:54.01:0,54,816	1/1:18,0:18:19.89:98,20,0	0/1:21,0:21:5.03:210,0,5	1/1:20,0:19:36.98:240,37,0	1/1:8,0:8:14.91:108,15,0
chr10	4614783	.	CG	C	4084.62	PASS	AB=0.524;AC=7;AF=0.125;AN=56;BaseQRankSum=13.936;DP=620;FS=5.620;HRun=1;HaplotypeScore=75.6797;InbreedingCoeff=0.8362;MQ=78.22;MQ0=0;MQRankSum=-1.962;QD=37.47;ReadPosRankSum=3.772;VQSLOD=4.2359;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,43:43:99:1718,123,0	0/0:8,0:8:24.06:0,24,340	0/0:25,0:23:50.75:0,51,795	0/0:16,0:16:40.46:0,40,660	0/0:25,0:25:75.22:0,75,1139	0/0:16,0:16:48.15:0,48,731	0/0:31,0:31:93.26:0,93,1411	0/0:30,0:30:87.30:0,87,1384	0/0:17,0:17:51.15:0,51,768	0/0:32,0:32:96.33:0,96,1529	0/0:17,0:17:51.17:0,51,814	0/0:27,0:27:81.25:0,81,1247	0/0:22,0:22:66.19:0,66,988	0/0:18,0:18:54.17:0,54,836	0/0:20,0:20:60.20:0,60,958	0/0:19,0:19:54.17:0,54,839	0/0:35,0:35:99:0,105,1618	0/0:22,0:22:66.19:0,66,1006	0/0:17,0:17:51.17:0,51,792	0/0:24,0:24:69.24:0,69,1101	0/0:25,0:25:72.25:0,72,1147	0/0:14,0:14:42.13:0,42,647	0/0:15,0:15:45.14:0,45,695	0/0:22,0:22:66.22:0,66,1045	0/0:14,0:14:39.13:0,39,622	0/1:2,20:22:29.73:773,0,30	1/1:0,31:31:81.09:1132,81,0	1/1:0,13:13:33.11:461,33,0
chr10	4615243	.	TG	T	1526.09	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=8.860;DP=664;FS=8.356;HRun=2;HaplotypeScore=104.2705;InbreedingCoeff=0.9352;MQ=63.87;MQ0=18;MQRankSum=-4.757;QD=21.20;ReadPosRankSum=-2.805;VQSLOD=2.2599;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:21,12:32:31.76:537,32,0	0/0:8,0:8:11.26:0,11,248	0/0:40,0:14:32.91:0,33,420	0/0:39,0:17:38.20:0,38,447	0/0:19,0:19:35.48:0,35,473	0/0:25,0:25:64.65:0,65,805	0/0:29,0:29:83.12:0,83,994	0/0:24,0:24:69.22:0,69,913	0/0:15,0:15:40.65:0,41,512	0/0:24,0:23:61.87:0,62,776	0/0:15,0:15:39.13:0,39,547	0/0:31,0:30:77.71:0,78,1031	0/0:21,0:21:55.64:0,56,685	0/0:26,0:25:68.65:0,69,855	0/0:16,0:16:14.26:0,14,168	0/0:23,0:23:62.65:0,63,818	0/0:27,0:27:40.08:0,40,437	0/0:20,0:19:48.16:0,48,643	0/0:13,0:12:27.07:0,27,341	0/0:13,0:12:33.10:0,33,431	0/0:75,0:74:99:0,181,2385	0/0:19,0:18:48.12:0,48,637	0/0:8,0:8:23.95:0,24,309	0/0:39,2:41:99:0,110,1374	0/0:21,0:21:32.97:0,33,366	1/1:6,13:19:3.91:561,4,0	1/1:7,6:11:33.09:389,33,0	1/1:3,4:5:15.05:190,15,0
chr10	4615244	.	GGT	G	327.78	PASS	AB=0.903;AC=19;AF=0.380;AN=50;BaseQRankSum=6.780;DP=660;FS=13.842;HRun=0;HaplotypeScore=115.8213;InbreedingCoeff=-0.0541;MQ=62.93;MQ0=18;MQRankSum=-0.765;QD=0.87;ReadPosRankSum=0.323;VQSLOD=1.6350;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:31:2.59:0,3,21	0/0:8,0:8:0.91:0,1,163	./.	./.	0/1:13,4:17:11.79:12,0,219	0/1:22,3:25:68.42:68,0,264	0/1:26,1:29:30.80:31,0,265	0/0:27,0:27:11.91:0,12,98	0/0:13,0:15:6.46:0,6,210	0/1:22,2:23:13.31:13,0,219	0/0:15,0:15:24.08:0,24,345	0/0:27,2:29:12.12:0,12,518	0/1:16,4:21:49.88:50,0,250	0/1:23,1:25:32.52:33,0,143	1/1:5,0:15:2.84:14,3,0	0/1:21,2:24:7.63:8,0,375	1/1:10,0:26:9.98:44,10,0	0/0:19,0:19:4.19:0,4,12	0/1:10,0:11:22.23:22,0,70	0/0:13,0:12:15.05:0,15,206	0/1:69,1:74:65.64:66,0,906	0/0:19,0:19:27.08:0,27,375	0/0:8,0:8:10.83:0,11,118	0/1:39,2:41:54.81:55,0,682	./.	1/1:19,0:19:15.40:47,15,0	0/1:14,0:12:3.67:7,0,4	1/1:7,0:5:4.05:10,4,0
chr10	4615249	.	GT	G	1345.71	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=8.602;DP=657;FS=3.391;HRun=1;HaplotypeScore=103.3618;InbreedingCoeff=0.9024;MQ=57.00;MQ0=20;MQRankSum=-5.177;QD=17.48;ReadPosRankSum=-3.300;VQSLOD=2.9699;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:23,9:33:28.18:405,28,0	0/0:7,0:7:17.98:0,18,268	0/0:35,0:9:21.03:0,21,220	0/0:36,0:14:12.62:0,13,376	0/0:17,0:17:38.16:0,38,523	0/0:25,0:25:63.30:0,63,809	0/0:30,0:30:84.22:0,84,1017	0/0:26,0:26:74.01:0,74,912	0/0:15,0:15:37.13:0,37,518	0/0:26,0:25:67.64:0,68,843	0/0:19,0:19:45.14:0,45,637	0/0:28,0:27:74.27:0,74,1039	0/0:23,0:23:28.03:0,28,661	0/0:26,0:25:68.18:0,68,821	0/0:16,0:15:11.84:0,12,152	0/0:26,0:26:62.23:0,62,857	0/0:28,0:26:24.72:0,25,267	0/0:17,0:16:42.06:0,42,501	0/0:10,0:9:1.84:0,2,207	0/0:12,0:11:27.09:0,27,392	0/0:71,0:70:99:0,181,2397	0/0:19,0:18:48.15:0,48,690	0/0:8,0:8:24.07:0,24,324	0/0:44,0:44:99:0,106,1436	0/0:16,0:16:15.05:0,15,191	1/1:6,12:20:11.92:617,12,0	1/1:9,5:13:22.89:315,23,0	1/1:4,3:5:12.04:162,12,0
chr10	4615460	.	AGTAT	A	1165.65	PASS	AB=0.924;AC=6;AF=0.107;AN=56;BaseQRankSum=6.454;DP=531;FS=1.622;HRun=0;HaplotypeScore=96.1242;InbreedingCoeff=0.5341;MQ=65.53;MQ0=0;MQRankSum=0.891;QD=12.27;ReadPosRankSum=-2.518;VQSLOD=2.7341;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,15:18:39.13:623,39,0	0/0:11,0:11:21.07:0,21,503	0/0:14,0:12:6.02:0,6,113	0/0:21,0:18:3:0,3,25	0/0:21,0:21:48.16:0,48,1074	0/0:15,0:15:24.07:0,24,528	0/0:16,0:16:30.09:0,30,621	1/1:27,14:41:41.13:613,41,0	0/1:21,2:23:50.63:51,0,874	0/0:20,0:20:57.20:0,57,1315	0/0:18,0:18:33.11:0,33,766	0/0:26,0:26:54.19:0,54,1268	0/0:12,0:12:18.06:0,18,431	0/0:13,0:13:24.08:0,24,557	0/0:17,0:17:36.12:0,36,859	0/0:25,0:25:66.22:0,66,1516	0/0:7,0:19:36.10:0,36,586	0/0:25,0:25:45.15:0,45,1044	0/0:15,0:15:21.07:0,21,483	0/0:17,0:17:27.09:0,27,624	0/0:30,0:30:81.28:0,81,1892	0/0:17,0:17:48.16:0,48,1142	0/0:7,0:7:15.05:0,15,326	0/1:12,1:13:14.82:15,0,669	0/0:32,0:32:78.27:0,78,1869	0/0:8,0:17:30.09:0,30,481	0/0:9,0:23:33.06:0,33,551	0/0:1,0:4:6.02:0,6,105
chr10	4616431	.	C	CGT	752.95	PASS	AB=0.921;AC=13;AF=0.250;AN=52;BaseQRankSum=-2.271;DP=746;FS=0.000;HRun=0;HaplotypeScore=140.5808;InbreedingCoeff=-0.2109;MQ=64.20;MQ0=14;MQRankSum=0.746;QD=2.55;ReadPosRankSum=-2.379;VQSLOD=2.0226;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:33,1:33:24.91:25,0,93	0/0:3,0:3:3.01:0,3,30	./.	./.	0/1:20,0:23:4.21:4,0,129	0/0:20,0:21:3.73:0,4,273	0/1:33,2:36:39.94:40,0,385	1/1:25,0:23:2.48:19,2,0	0/1:21,1:24:19.02:19,0,251	0/0:38,0:38:35.77:0,36,381	0/0:13,0:17:8.95:0,9,81	0/1:24,11:38:73.79:241,0,74	0/1:18,2:19:35.80:152,0,36	0/1:21,12:35:81.77:330,0,82	0/0:22,0:23:25.37:0,25,243	0/1:13,1:16:16.89:17,0,205	0/0:17,0:27:24.28:0,24,116	0/0:24,0:26:39.50:0,40,353	0/1:16,0:16:11.28:11,0,27	0/0:19,0:21:17.88:0,18,179	0/0:80,0:85:99:0,111,1012	0/1:16,1:17:21.68:22,0,161	0/1:11,0:11:15.35:15,0,35	0/0:41,0:45:64.77:0,65,760	0/0:15,0:16:20.82:0,21,187	0/0:34,0:34:20.62:0,21,125	0/0:15,0:15:8.62:0,9,46	0/0:12,0:13:10.34:0,10,47
chr10	4616463	.	TGTGTGC	T	1445.53	PASS	AB=0.934;AC=7;AF=0.130;AN=54;BaseQRankSum=9.311;DP=728;FS=4.976;HRun=0;HaplotypeScore=188.5314;InbreedingCoeff=0.4651;MQ=54.09;MQ0=11;MQRankSum=-4.021;QD=14.17;ReadPosRankSum=-1.021;VQSLOD=2.7889;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:26:11.33:0,11,691	0/0:7,0:7:20.91:0,21,274	./.	0/1:21,0:6:5.04:5,0,101	0/0:23,0:23:40.20:0,40,803	0/0:21,0:21:60:0,60,1304	0/0:44,0:44:96.30:0,96,2027	0/0:16,0:14:3.89:0,4,178	0/0:27,0:27:68.88:0,69,1433	0/0:41,0:41:99:0,110,2307	0/0:14,0:13:23.93:0,24,416	0/0:40,0:40:79.04:0,79,1379	0/0:19,0:17:47.89:0,48,1092	0/0:34,0:34:71.77:0,72,1565	0/0:20,0:19:5.67:0,6,761	0/0:13,0:13:30.06:0,30,868	0/1:29,1:29:99:192,0,101	0/0:29,0:28:66.62:0,67,1204	0/0:26,0:25:59.83:0,60,493	0/0:16,0:16:34.75:0,35,703	0/0:83,0:83:99:0,193,4272	0/0:20,0:20:54.02:0,54,1264	0/0:11,0:11:20.80:0,21,347	0/0:57,0:57:99:0,155,3459	0/0:29,0:28:29.02:0,29,720	0/1:20,5:25:65.36:703,0,65	1/1:6,6:12:14.99:221,15,0	1/1:11,3:14:38.84:460,39,0
chr10	4616467	.	TGCGCGCACGCGCGTGC	T	276.92	PASS	AB=0.966;AC=3;AF=0.056;AN=54;BaseQRankSum=-0.289;DP=705;FS=13.823;HRun=0;HaplotypeScore=315.1604;InbreedingCoeff=0.5256;MQ=54.42;MQ0=9;MQRankSum=-5.124;QD=6.29;ReadPosRankSum=-5.034;VQSLOD=-0.1808;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:29.82:0,30,1122	0/0:7,0:7:21.07:0,21,1280	./.	0/0:17,0:5:5.83:0,6,95	0/0:21,0:21:20.24:0,20,2572	0/0:22,0:22:63.22:0,63,3940	0/0:41,0:41:91.96:0,92,5304	1/1:7,9:14:31.86:354,32,0	0/0:25,0:25:63.67:0,64,3398	0/0:38,0:38:91.84:0,92,6228	0/0:14,0:13:24.08:0,24,1441	0/0:35,0:35:69.19:0,69,4071	0/0:19,0:17:23.21:0,23,2563	0/0:38,0:38:78.11:0,78,4420	0/0:20,0:19:51.18:0,51,2627	0/0:14,0:14:36.07:0,36,2049	0/0:29,0:28:64.37:0,64,2130	0/1:27,0:27:28.44:28,0,3092	0/0:22,0:22:15.13:0,15,1928	0/0:17,0:17:39.13:0,39,2454	0/0:76,0:76:99:0,195,11669	0/0:21,0:21:51.16:0,51,3079	0/0:13,0:13:6.14:0,6,1676	0/0:54,0:56:99:0,105,8872	0/0:28,0:27:60.16:0,60,2703	0/0:27,0:27:49.09:0,49,1355	0/0:12,0:12:15.03:0,15,290	0/0:14,0:14:9.58:0,10,534
chr10	4616483	.	CGTGT	C	2374.60	PASS	AB=0.565;AC=9;AF=0.161;AN=56;BaseQRankSum=6.804;DP=758;FS=0.517;HRun=0;HaplotypeScore=158.4189;InbreedingCoeff=0.8139;MQ=59.56;MQ0=3;MQRankSum=-3.519;QD=21.01;ReadPosRankSum=1.195;VQSLOD=3.3289;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:16,10:26:11.11:118,11,0	0/0:9,0:9:24.07:0,24,557	0/0:22,0:6:8.96:0,9,117	0/0:23,0:10:17.26:0,17,234	0/0:25,0:25:57.20:0,57,1305	0/0:23,0:23:60.19:0,60,1408	0/0:41,0:41:81.73:0,82,1871	0/0:10,0:10:24:0,24,322	0/0:32,0:32:75.18:0,75,1528	0/0:42,0:42:96.10:0,96,2144	0/0:13,0:12:27.09:0,27,654	0/0:33,0:33:81.24:0,81,1780	0/0:19,0:20:56.84:0,57,1153	0/0:38,0:38:84.20:0,84,1789	0/0:3,0:23:45.15:0,45,807	0/0:13,0:13:30.09:0,30,695	1/1:21,14:34:54.40:852,54,0	0/0:10,0:28:38.26:0,38,615	0/0:14,0:14:25.33:0,25,594	0/0:22,0:22:60.17:0,60,1346	0/0:89,0:90:99:0,234,4961	0/0:23,0:23:60.17:0,60,1361	0/0:19,0:19:54.17:0,54,1261	0/0:51,0:51:99:0,135,3279	0/0:7,0:29:57.19:0,57,993	0/1:6,19:26:15.98:832,0,16	1/1:5,7:12:6.02:104,6,0	1/1:1,13:14:36.12:625,36,0
chr10	4616664	.	A	ATG	3054.62	PASS	AB=0.555;AC=6;AF=0.107;AN=56;BaseQRankSum=11.145;DP=1096;FS=0.435;HRun=0;HaplotypeScore=153.7850;InbreedingCoeff=0.6783;MQ=63.06;MQ0=1;MQRankSum=-0.897;QD=24.05;ReadPosRankSum=0.561;VQSLOD=4.3036;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:15,39:55:34.36:1352,34,0	0/0:13,0:13:36.12:0,36,478	0/0:35,0:26:50.98:0,51,609	0/0:39,0:29:54.90:0,55,725	0/0:36,0:36:99:0,100,1313	0/0:19,0:19:51.15:0,51,662	0/0:52,0:52:99:0,126,1657	0/0:41,0:41:99:0,108,1333	0/0:52,0:52:99:0,150,1981	0/0:64,0:64:99:0,172,2247	0/0:27,0:27:69.21:0,69,902	0/0:49,0:49:99:0,107,1546	0/0:39,0:39:99:0,108,1394	0/0:41,0:41:99:0,111,1443	0/0:52,0:52:99:0,111,1462	0/0:34,0:34:99:0,99,1300	0/0:46,0:45:99:0,111,1456	0/0:30,0:30:78.26:0,78,1033	0/0:22,0:22:51.17:0,51,669	0/0:35,0:35:99:0,102,1323	0/0:94,0:94:99:0,238,3294	0/0:32,0:32:87.29:0,87,1153	0/0:28,0:28:75.23:0,75,982	0/0:59,0:59:99:0,160,2096	0/0:29,0:29:72.24:0,72,956	1/1:23,21:44:45.83:1229,46,0	0/1:2,15:17:13.20:437,0,13	0/1:3,7:11:6.71:174,0,7
chr10	4616760	.	TTG	T	1355.48	PASS	AB=0.942;AC=10;AF=0.179;AN=56;BaseQRankSum=6.447;DP=1045;FS=0.931;HRun=0;HaplotypeScore=165.6568;InbreedingCoeff=0.2760;MQ=54.08;MQ0=18;MQRankSum=1.073;QD=4.53;ReadPosRankSum=-1.533;VQSLOD=2.9714;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:23,34:60:88.61:1266,89,0	0/0:11,0:11:21.05:0,21,301	0/0:49,0:11:5.93:0,6,60	0/1:36,1:15:6.56:7,0,148	0/0:29,1:30:7.23:0,7,528	0/1:18,1:19:1.91:2,0,410	0/0:57,0:57:99:0,111,1624	1/1:23,0:39:19.13:159,19,0	0/0:39,0:38:75.22:0,75,1113	0/1:36,3:40:29.66:30,0,823	0/0:10,2:12:21.07:0,21,312	0/0:41,0:41:72.24:0,72,1114	0/0:40,2:43:29.39:0,29,1308	0/1:31,3:34:3.79:4,0,828	0/0:19,0:54:56.83:0,57,460	0/0:41,0:41:76.17:0,76,1217	0/0:27,0:40:69.47:0,69,661	0/0:6,0:17:14.99:0,15,135	0/1:22,2:23:12.20:12,0,458	0/0:33,1:33:7.53:0,8,595	0/0:73,3:75:9.57:0,10,1859	0/1:43,2:45:20.76:21,0,1008	0/0:31,0:31:54.46:0,54,773	0/0:67,1:69:98.07:0,98,2095	0/0:10,0:20:9:0,9,79	0/0:29,0:44:75.44:0,75,690	0/0:9,0:22:53.96:0,54,472	0/0:11,0:12:14.95:0,15,119
chr10	4616868	.	T	TTG	1220.43	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-1.331;DP=1092;FS=0.650;HRun=0;HaplotypeScore=150.3080;InbreedingCoeff=0.9973;MQ=55.27;MQ0=18;MQRankSum=2.951;QD=35.89;ReadPosRankSum=0.724;VQSLOD=5.0984;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:67,0:64:99:0,99,1162	0/0:14,0:14:39.12:0,39,484	0/0:45,0:16:23.56:0,24,243	0/0:52,0:18:32.50:0,32,298	0/0:27,0:27:60.18:0,60,738	0/0:23,0:23:63.20:0,63,787	0/0:39,0:40:81.38:0,81,1106	0/0:49,0:49:99:0,103,1244	0/0:35,0:35:90.26:0,90,1098	0/0:62,0:64:99:0,132,1939	0/0:16,0:16:42.04:0,42,493	0/0:48,0:48:99:0,123,1518	0/0:45,0:45:99:0,111,1330	0/0:39,0:38:99:0,102,1256	0/0:45,0:45:99:0,123,1503	0/0:43,0:43:99:0,114,1382	1/1:15,19:34:88.44:1315,88,0	0/0:23,0:23:59.86:0,60,713	0/0:28,0:23:45.05:0,45,518	0/0:40,0:40:99:0,105,1249	0/0:71,0:70:99:0,165,2022	0/0:32,0:32:73.44:0,73,914	0/0:24,0:24:60.15:0,60,723	0/0:61,0:60:99:0,156,1891	0/0:25,0:25:65.40:0,65,773	0/0:53,0:50:90.19:0,90,1106	0/0:29,0:28:63.52:0,64,711	0/0:20,0:20:51.35:0,51,587
chr10	4616960	.	T	TTG	1155.05	PASS	AB=1.000;AC=7;AF=0.130;AN=54;BaseQRankSum=-0.790;DP=865;FS=1.325;HRun=0;HaplotypeScore=123.8955;InbreedingCoeff=0.8304;MQ=57.26;MQ0=10;MQRankSum=0.462;QD=9.87;ReadPosRankSum=0.909;VQSLOD=3.6426;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:40,0:39:6.19:6,0,24	0/0:8,0:8:24.07:0,24,287	0/0:41,0:19:44.87:0,45,510	0/0:34,0:16:18.43:0,18,208	0/0:32,0:35:89.92:0,90,1022	0/0:25,0:25:56.80:0,57,618	0/0:38,0:38:87.19:0,87,999	0/0:47,0:47:83.43:0,83,945	0/0:33,0:33:78.23:0,78,925	0/0:48,0:49:99:0,105,1183	0/0:21,0:21:51.04:0,51,554	0/0:31,0:31:84.26:0,84,1004	0/0:33,0:35:74.84:0,75,865	0/0:29,0:29:75.23:0,75,899	0/0:33,0:34:75:0,75,847	0/0:36,0:37:90.07:0,90,1042	1/1:12,19:31:36.28:1035,36,0	0/0:24,0:25:37.74:0,38,641	0/0:20,0:18:43.49:0,43,472	0/0:30,0:30:65.87:0,66,791	0/0:52,0:53:99:0,120,1361	0/0:33,0:33:72.22:0,72,863	0/0:27,0:28:66.03:0,66,768	0/0:32,0:33:66.03:0,66,769	0/0:25,0:25:54.17:0,54,647	1/1:28,0:27:12.48:187,12,0	1/1:18,0:18:8.89:62,9,0	./.
chr10	4617186	.	CT	C	3906.89	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=13.143;DP=766;FS=1.291;HRun=1;HaplotypeScore=79.0921;InbreedingCoeff=0.9994;MQ=79.40;MQ0=0;MQRankSum=-3.859;QD=37.93;ReadPosRankSum=2.387;VQSLOD=4.3621;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,43:44:99:1590,114,0	0/0:11,0:11:33.09:0,33,491	0/0:26,0:25:72.22:0,72,1114	0/0:20,0:20:57.17:0,57,856	0/0:23,0:23:69.20:0,69,1052	0/0:32,0:31:90.29:0,90,1402	0/0:36,0:36:99:0,108,1727	0/0:34,0:34:99:0,102,1587	0/0:30,0:30:87.28:0,87,1364	0/0:40,0:40:99:0,111,1744	0/0:15,0:15:42.14:0,42,671	0/0:42,0:42:99:0,123,1928	0/0:23,0:23:69.22:0,69,1066	0/0:22,0:22:66.23:0,66,1055	0/0:29,0:29:84.29:0,84,1331	0/0:29,0:29:87.27:0,87,1334	0/0:37,0:37:99:0,111,1750	0/0:32,0:32:96.28:0,96,1483	0/0:21,0:21:63.20:0,63,979	0/0:27,0:27:72.23:0,72,1128	0/0:34,0:34:96.31:0,96,1509	0/0:23,0:23:66.23:0,66,1055	0/0:24,0:24:69.23:0,69,1103	0/0:27,0:27:78.27:0,78,1247	0/0:26,0:26:75.23:0,75,1162	1/1:0,29:29:87.18:1142,87,0	1/1:0,21:21:60.20:839,60,0	1/1:0,9:9:24.08:336,24,0
chr10	4617522	.	C	CTGTT	5986.03	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-9.900;DP=602;FS=5.548;HRun=0;HaplotypeScore=99.1270;InbreedingCoeff=0.9964;MQ=81.00;MQ0=0;MQRankSum=-3.626;QD=68.02;ReadPosRankSum=-0.355;VQSLOD=6.8655;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,30:32:84.24:2164,84,0	0/0:7,0:7:21.03:0,21,332	0/0:21,0:21:39.64:0,40,682	0/0:27,0:26:45.70:0,46,845	0/0:36,0:36:99:0,99,1859	0/0:28,0:28:81.28:0,81,1530	0/0:14,0:14:28.75:0,29,727	0/0:25,0:25:66.23:0,66,1240	0/0:23,0:23:66.23:0,66,1235	0/0:28,0:28:78.27:0,78,1475	0/0:20,0:20:57.20:0,57,1072	0/0:20,0:20:54.17:0,54,992	0/0:17,0:17:51.17:0,51,938	0/0:17,0:17:51.15:0,51,888	0/0:17,0:17:51.16:0,51,936	0/0:20,0:20:60.19:0,60,1100	0/0:23,0:23:69.21:0,69,1270	0/0:17,0:17:48.16:0,48,878	0/0:23,0:23:66.22:0,66,1182	0/0:36,0:36:99:0,99,1821	0/0:15,0:15:42.12:0,42,763	0/0:16,0:16:48.16:0,48,903	0/0:23,0:23:66.23:0,66,1238	0/0:17,0:17:51.16:0,51,935	0/0:24,0:24:72.23:0,72,1309	1/1:2,21:23:69.24:1659,69,0	1/1:1,26:27:63.22:1678,63,0	1/1:0,6:6:18.06:486,18,0
chr10	4618571	.	T	TG	2365.54	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=10.905;DP=684;FS=1.506;HRun=3;HaplotypeScore=105.4021;InbreedingCoeff=0.9993;MQ=86.19;MQ0=0;MQRankSum=-12.526;QD=24.64;ReadPosRankSum=-1.385;VQSLOD=2.7410;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,23:26:44.33:496,44,0	0/0:12,0:12:36.10:0,36,421	0/0:28,0:27:72.09:0,72,802	0/0:23,0:23:60.13:0,60,666	0/0:20,0:20:60.18:0,60,720	0/0:16,0:16:48.15:0,48,576	0/0:26,0:26:75.21:0,75,887	0/0:21,0:21:57.17:0,57,684	0/0:27,0:27:78.21:0,78,913	0/0:11,0:11:33.10:0,33,396	0/0:14,0:14:39.12:0,39,468	0/0:39,0:39:99:0,114,1340	0/0:26,0:26:75.22:0,75,889	0/0:24,0:24:69.19:0,69,813	0/0:38,0:38:99:0,108,1284	0/0:20,0:20:60.18:0,60,720	1/1:7,17:24:38.12:493,38,0	0/0:39,0:39:99:0,111,1332	0/0:19,0:19:57.17:0,57,673	0/0:20,0:20:54.14:0,54,625	0/0:72,0:72:99:0,199,2364	0/0:18,0:18:51.13:0,51,590	0/0:19,0:19:54.15:0,54,630	0/0:37,0:37:99:0,105,1260	0/0:19,0:19:54.17:0,54,648	1/1:1,22:23:33.20:799,33,0	1/1:1,13:13:38.15:457,38,0	1/1:0,8:8:24.07:295,24,0
chr10	4618575	.	T	TGACGGGTATTCA	17040.32	PASS	AB=0.761;AC=9;AF=0.161;AN=56;BaseQRankSum=15.198;DP=734;FS=0.000;HRun=0;HaplotypeScore=262.3840;InbreedingCoeff=0.8735;MQ=83.27;MQ0=0;MQRankSum=-15.982;QD=127.17;ReadPosRankSum=-3.347;VQSLOD=4.0283;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:19,14:33:87.30:4371,87,0	0/0:12,0:12:36.12:0,36,1336	0/0:26,0:25:60.20:0,60,1897	0/0:24,0:24:66.02:0,66,1966	0/0:22,0:22:66.21:0,66,2273	0/0:17,0:17:48.16:0,48,1675	0/0:29,0:29:78.23:0,78,2597	0/0:22,0:22:57.18:0,57,1729	0/0:25,0:25:75.24:0,75,2714	0/0:15,0:15:36.12:0,36,1187	0/0:14,0:14:39.13:0,39,1451	0/0:38,0:38:99:0,108,3908	0/0:30,0:30:84.26:0,84,2876	0/0:26,0:26:69.22:0,69,2422	0/0:40,0:40:99:0,114,4053	0/0:20,0:20:57.20:0,57,2084	1/1:23,7:30:66.17:3005,66,0	0/0:38,0:38:99:0,108,3845	0/0:21,0:21:63.20:0,63,2015	0/0:20,0:20:57.17:0,57,1931	0/0:69,0:69:99:0,196,6976	0/0:18,0:18:54.19:0,54,1955	0/0:18,0:18:51.13:0,51,1727	0/0:36,0:36:99:0,102,3700	0/0:20,0:20:60.19:0,60,2053	0/1:24,11:35:13.58:4779,0,14	1/1:15,7:21:65.89:3042,66,0	1/1:8,5:13:36.04:1843,36,0
chr10	4619088	.	TC	T	1182.97	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.838;DP=498;FS=9.363;HRun=7;HaplotypeScore=56.9697;InbreedingCoeff=0.9226;MQ=62.24;MQ0=11;MQRankSum=2.723;QD=21.91;ReadPosRankSum=1.671;VQSLOD=2.8555;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:23:45.52:0,46,231	0/0:3,0:3:6.02:0,6,75	0/0:34,1:13:21.41:0,21,226	0/0:32,0:8:7.85:0,8,96	0/0:14,0:14:39.12:0,39,490	0/0:12,0:12:33.09:0,33,396	0/0:18,0:18:42.12:0,42,515	0/0:20,0:20:42.11:0,42,496	0/0:17,0:17:48.10:0,48,561	0/0:14,0:14:36.10:0,36,431	0/0:5,0:5:15.04:0,15,176	0/0:15,0:13:32.84:0,33,387	0/0:11,0:11:33.09:0,33,401	0/0:13,0:12:36.10:0,36,436	0/0:19,0:19:48.14:0,48,590	0/0:21,0:21:60.18:0,60,744	0/0:14,0:14:17.04:0,17,84	0/0:20,0:20:54.15:0,54,662	0/0:17,0:15:33.11:0,33,414	0/0:16,0:15:39.12:0,39,486	0/0:39,0:39:99:0,102,1229	0/0:20,0:20:54.14:0,54,660	0/0:9,0:9:14.74:0,15,188	0/0:23,0:22:45.12:0,45,541	0/0:13,0:13:36.09:0,36,426	1/1:3,19:22:22.36:530,22,0	1/1:2,16:18:48.11:489,48,0	1/1:4,10:14:30.06:306,30,0
chr10	4619093	.	C	CCCCA	402.55	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-1.077;DP=497;FS=1.669;HRun=0;HaplotypeScore=88.8251;InbreedingCoeff=0.8884;MQ=61.68;MQ0=12;MQRankSum=0.179;QD=30.97;ReadPosRankSum=0.342;VQSLOD=3.6507;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:32.80:0,33,159	0/0:3,0:3:9.02:0,9,127	0/0:37,0:13:26.36:0,26,337	0/0:39,0:8:12.57:0,13,202	0/0:13,0:13:39.13:0,39,679	0/0:11,0:11:33.10:0,33,549	0/0:15,0:15:42.13:0,42,723	0/0:22,0:22:48.12:0,48,731	0/0:17,0:17:45.12:0,45,748	0/0:15,0:15:42.12:0,42,652	0/0:5,0:5:15.04:0,15,242	0/0:16,0:14:36.07:0,36,565	0/0:11,0:11:33.09:0,33,559	0/0:14,0:13:35.69:0,36,570	0/0:18,0:18:51.15:0,51,851	0/0:22,0:22:62.23:0,62,1060	1/1:2,10:13:21.04:495,21,0	0/0:19,0:19:54.16:0,54,926	0/0:15,0:13:33.11:0,33,579	0/0:18,0:17:51.10:0,51,797	0/0:37,0:37:99:0,104,1733	0/0:21,0:21:57.11:0,57,912	0/0:7,0:7:15.05:0,15,270	0/0:20,0:19:45.12:0,45,742	0/0:14,0:14:36.09:0,36,580	0/0:21,0:21:58.05:0,58,595	0/0:19,0:18:48.08:0,48,479	0/0:13,0:13:33.05:0,33,327
chr10	4619134	.	TCTC	T	555.48	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=2.630;DP=424;FS=5.865;HRun=0;HaplotypeScore=65.6417;InbreedingCoeff=0.5431;MQ=64.06;MQ0=6;MQRankSum=0.198;QD=8.96;ReadPosRankSum=-4.317;VQSLOD=0.6366;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:33.11:0,33,683	0/0:4,0:4:12.04:0,12,257	0/1:42,0:14:11.23:11,0,200	0/0:49,0:15:11.99:0,12,265	0/0:16,0:16:45.15:0,45,964	0/0:10,0:10:27.08:0,27,539	0/0:14,0:14:33.11:0,33,688	1/1:8,12:20:41.97:647,42,0	0/0:15,0:15:42.12:0,42,822	0/0:15,0:15:41.87:0,42,802	0/0:2,0:2:3.01:0,3,64	0/0:9,0:9:27.08:0,27,511	0/0:9,0:9:24.08:0,24,509	0/0:7,0:7:21.07:0,21,438	0/0:17,0:17:48.16:0,48,1017	0/0:18,0:18:45.13:0,45,880	0/0:7,0:7:12.04:0,12,239	0/0:15,0:15:42.14:0,42,887	0/0:5,0:5:15.05:0,15,320	0/0:14,0:14:42.14:0,42,894	0/0:24,0:24:57.20:0,57,1187	0/0:18,0:18:47.74:0,48,936	0/0:10,0:10:27.08:0,27,514	0/0:18,0:18:48.13:0,48,970	0/0:12,0:12:36.12:0,36,742	0/0:12,0:12:33.11:0,33,693	0/0:14,0:14:36.10:0,36,691	0/0:8,0:8:21.07:0,21,451
chr10	4619390	.	G	GTTTT	2047.14	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-7.003;DP=688;FS=3.853;HRun=0;HaplotypeScore=119.0353;InbreedingCoeff=0.9823;MQ=77.69;MQ0=0;MQRankSum=-5.274;QD=70.59;ReadPosRankSum=1.865;VQSLOD=6.0001;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,154,3187	0/0:9,0:9:27.09:0,27,549	0/0:25,0:24:72.02:0,72,1322	0/0:30,0:30:86.67:0,87,1585	0/0:19,0:19:57.20:0,57,1187	0/0:16,0:16:45.15:0,45,944	0/0:30,0:30:90.31:0,90,1873	0/0:33,0:33:93.29:0,93,1817	0/0:31,0:31:90.31:0,90,1885	0/0:25,0:25:75.26:0,75,1572	0/0:5,0:5:15.05:0,15,315	0/0:31,0:31:90.31:0,90,1887	0/0:23,0:23:69.24:0,69,1426	0/0:21,0:21:63.20:0,63,1251	0/0:29,0:29:87.30:0,87,1822	0/0:32,0:32:93.31:0,93,1911	1/1:1,28:29:75.26:2142,75,0	0/0:18,0:18:54.19:0,54,1128	0/0:22,0:22:63.22:0,63,1322	0/0:20,0:20:57.20:0,57,1194	0/0:61,0:61:99:0,181,3775	0/0:21,0:21:63.22:0,63,1321	0/0:11,0:11:33.11:0,33,692	0/0:36,0:36:99:0,105,2154	0/0:14,0:14:42.14:0,42,854	0/0:17,0:17:51.18:0,51,1070	0/0:19,0:19:57.18:0,57,1157	0/0:9,0:9:27.09:0,27,565
chr10	4623789	.	GT	G	2707.28	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=15.289;DP=759;FS=6.364;HRun=1;HaplotypeScore=91.3249;InbreedingCoeff=0.9999;MQ=86.04;MQ0=0;MQRankSum=-2.993;QD=27.63;ReadPosRankSum=4.468;VQSLOD=3.3387;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,108,1721	0/0:14,0:14:39.13:0,39,623	0/0:27,0:27:69.75:0,70,1030	0/0:23,0:23:47.26:0,47,821	0/0:29,0:29:87.30:0,87,1391	0/0:30,0:30:90.29:0,90,1416	0/0:15,0:15:45.14:0,45,696	0/0:43,0:43:99:0,129,2063	0/0:26,0:26:78.27:0,78,1247	0/0:28,0:28:84.28:0,84,1311	0/0:19,0:19:57.19:0,57,908	0/0:27,0:27:81.26:0,81,1268	0/0:28,0:28:81.25:0,81,1248	0/0:12,0:12:36.10:0,36,551	1/1:0,27:27:74.79:739,75,0	0/0:29,0:29:87.28:0,87,1368	1/1:0,23:23:68.92:693,69,0	1/1:3,9:12:33.01:330,33,0	0/0:26,0:26:78.27:0,78,1248	0/0:24,0:24:72.23:0,72,1124	0/0:52,0:51:99:0,153,2413	0/0:35,0:35:99:0,105,1656	0/0:20,0:20:60.15:0,60,887	0/0:29,0:29:84.27:0,84,1315	1/1:1,35:36:99:1106,108,0	0/0:37,0:37:99:0,111,1728	0/0:36,0:36:99:0,108,1700	0/0:16,0:15:48.16:0,48,763
chr10	4623791	.	A	AGC	4530.75	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=14.821;DP=771;FS=5.626;HRun=0;HaplotypeScore=104.1102;InbreedingCoeff=0.9998;MQ=86.37;MQ0=0;MQRankSum=-2.753;QD=43.56;ReadPosRankSum=4.263;VQSLOD=6.4416;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,108,1683	0/0:14,0:14:39.13:0,39,633	0/0:27,0:27:61.31:0,61,983	0/0:23,0:24:54.13:0,54,806	0/0:30,0:30:90.29:0,90,1444	0/0:29,0:29:87.28:0,87,1394	0/0:15,0:15:45.15:0,45,726	0/0:44,0:44:99:0,129,2033	0/0:26,0:26:78.25:0,78,1247	0/0:29,0:29:81.28:0,81,1321	0/0:20,0:20:60.16:0,60,906	0/0:26,0:26:75.26:0,75,1223	0/0:27,0:27:78.27:0,78,1268	0/0:11,0:11:33.11:0,33,538	1/1:2,26:27:75.23:1176,75,0	0/0:29,0:29:87.30:0,87,1416	1/1:3,22:25:72.21:1127,72,0	1/1:6,9:15:30.07:455,30,0	0/0:28,0:28:81.25:0,81,1255	0/0:25,0:25:72.18:0,72,1096	0/0:51,0:50:99:0,147,2262	0/0:36,0:36:99:0,105,1686	0/0:18,0:18:54.18:0,54,877	0/0:28,0:28:81.26:0,81,1296	1/1:1,35:36:99:1772,108,0	0/0:39,0:39:99:0,114,1767	0/0:38,0:38:99:0,111,1782	0/0:16,0:15:48.16:0,48,783
chr10	4628909	.	AACAC	A	816.40	PASS	AB=0.944;AC=17;AF=0.340;AN=50;BaseQRankSum=5.136;DP=568;FS=4.160;HRun=0;HaplotypeScore=98.9232;InbreedingCoeff=0.5091;MQ=75.66;MQ0=24;MQRankSum=-2.943;QD=4.21;ReadPosRankSum=1.223;VQSLOD=1.9214;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:31:2.21:2,0,23	0/0:3,0:4:2.74:0,3,12	./.	./.	0/1:16,2:19:19.07:19,0,321	0/0:13,0:22:14.88:0,15,232	0/0:30,0:29:9.12:0,9,161	./.	0/0:12,0:11:3.01:0,3,43	0/0:15,0:15:9.50:0,9,153	0/0:14,0:14:11.93:0,12,186	0/1:13,0:13:18.68:19,0,226	0/0:18,0:16:6.70:0,7,294	0/0:11,0:14:11.78:0,12,204	1/1:16,0:27:19.53:155,20,0	0/0:23,0:22:12.70:0,13,532	1/1:18,12:30:12.03:183,12,0	1/1:16,0:21:3:28,3,0	0/0:12,0:11:3:0,3,26	0/0:13,0:12:6.02:0,6,112	0/0:38,0:34:26.81:0,27,433	0/0:20,0:20:18.06:0,18,382	0/0:12,0:14:6.34:0,6,100	0/0:24,0:27:22.63:0,23,450	1/1:9,6:15:18.06:275,18,0	1/1:12,0:12:3:26,3,0	1/1:10,3:13:6.02:91,6,0	1/1:6,6:12:12.04:183,12,0
chr10	4629627	.	G	GA	1116.06	PASS	AB=1.000;AC=45;AF=0.978;AN=46;DP=111;FS=0.000;HRun=2;HaplotypeScore=87.2783;InbreedingCoeff=0.1386;MQ=33.21;MQ0=0;QD=10.15;VQSLOD=1.1899;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	1/1:2,1:3:6.11:32,6,0	./.	./.	1/1:8,0:8:22.42:123,22,0	1/1:4,0:4:11.05:55,11,0	1/1:4,1:5:13.86:62,14,0	1/1:2,0:2:5.77:31,6,0	1/1:9,0:8:21.46:108,21,0	1/1:7,0:7:18.34:81,18,0	1/1:3,0:3:5.62:27,6,0	1/1:6,0:6:11.38:65,11,0	1/1:7,0:7:15.83:72,16,0	1/1:7,0:7:18.95:82,19,0	1/1:2,0:2:5.74:31,6,0	1/1:11,0:10:24.11:110,24,0	0/1:1,0:1:0:0,0,0	./.	1/1:3,0:2:5.60:29,6,0	1/1:4,0:4:8.20:36,8,0	1/1:6,2:8:5.87:35,6,0	1/1:4,0:4:11.45:61,11,0	1/1:2,0:2:5.78:31,6,0	1/1:4,0:4:9.33:36,9,0	./.	1/1:6,0:6:13.74:56,14,0	1/1:2,0:1:2.60:10,3,0	1/1:2,0:2:5.05:19,5,0
chr10	4629710	.	G	GAGGA	3403.86	PASS	AB=0.842;AC=8;AF=0.143;AN=56;BaseQRankSum=4.487;DP=684;FS=2.032;HRun=0;HaplotypeScore=183.4619;InbreedingCoeff=-0.1839;MQ=43.05;MQ0=20;MQRankSum=-5.166;QD=14.36;ReadPosRankSum=-4.969;VQSLOD=2.5753;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:21,10:31:24.44:939,0,24	0/0:8,0:8:24.08:0,24,407	0/0:15,0:1:3:0,3,29	0/0:12,0:2:6.02:0,6,83	0/0:22,0:22:57.19:0,57,946	0/0:18,0:18:51.17:0,51,882	0/0:22,0:22:46.76:0,47,748	0/1:43,0:26:37.98:38,0,657	0/0:36,0:36:47.94:0,48,1432	0/0:35,0:36:51.12:0,51,1286	0/0:13,0:13:39.13:0,39,661	0/0:27,0:31:44.39:0,44,1092	0/0:20,0:22:54.94:0,55,945	0/0:35,0:37:91.51:0,92,1454	0/1:28,12:33:99:982,0,108	0/0:38,0:39:83.78:0,84,1485	0/1:12,2:12:41:206,0,41	0/1:12,3:15:75.54:303,0,76	0/1:22,0:14:56.14:56,0,316	0/0:12,0:11:24.08:0,24,411	0/1:31,0:32:49.52:50,0,964	0/0:23,0:23:66.23:0,66,1129	0/0:14,0:14:39.12:0,39,597	0/0:33,0:33:25.29:0,25,1163	0/1:21,7:28:47.74:831,0,48	0/0:34,0:34:67.79:0,68,1363	0/0:15,0:16:38.37:0,38,613	0/0:2,0:2:6.02:0,6,96
chr10	4629785	.	A	AGGGG	4937.19	PASS	AB=0.906;AC=24;AF=0.429;AN=56;BaseQRankSum=12.792;DP=1093;FS=34.030;HRun=3;HaplotypeScore=338.7924;InbreedingCoeff=-0.7632;MQ=43.38;MQ0=29;MQRankSum=-13.601;QD=5.19;ReadPosRankSum=3.348;VQSLOD=-0.5776;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:48,4:46:99:346,0,1397	0/1:14,2:16:99:302,0,494	0/0:32,0:7:19.26:0,19,305	0/1:34,0:3:38.93:39,0,57	0/1:26,5:31:99:429,0,1211	0/1:22,1:24:63.80:64,0,1017	0/1:40,1:40:99:186,0,1598	0/1:51,0:36:36.77:37,0,922	0/1:34,2:41:99:152,0,1376	0/1:41,3:45:99:332,0,1890	0/1:17,1:18:59.50:59,0,677	0/1:33,2:35:99:162,0,1412	0/1:34,3:38:99:331,0,1326	0/1:35,3:43:99:239,0,1422	0/1:98,4:95:99:223,0,3511	0/1:30,0:34:23.62:24,0,1319	0/0:39,0:33:2.05:0,2,786	0/1:52,1:47:14.77:15,0,2236	0/1:18,0:14:8.57:9,0,602	0/1:11,6:18:99:532,0,450	0/0:54,0:55:76.89:0,77,2498	0/1:23,6:29:99:457,0,1063	0/1:12,2:13:99:234,0,500	0/1:41,5:45:99:435,0,1793	0/1:91,2:89:99:124,0,3036	0/1:36,2:40:99:147,0,1501	0/1:20,1:24:60.35:60,0,780	0/0:11,0:12:25.68:0,26,574
chr10	4629871	.	CGAA	C	525.58	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=9.021;DP=879;FS=14.571;HRun=0;HaplotypeScore=201.9738;InbreedingCoeff=0.7105;MQ=56.11;MQ0=1;MQRankSum=-6.033;QD=9.39;ReadPosRankSum=1.235;VQSLOD=2.3229;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:44:7.86:0,8,1721	0/0:16,0:16:48.15:0,48,962	0/0:30,0:20:44.07:0,44,767	0/0:48,0:29:47.01:0,47,997	0/0:27,0:27:75.26:0,75,1617	0/0:29,0:29:75.26:0,75,1661	0/0:32,0:32:67.45:0,67,1969	0/0:43,0:37:42.95:0,43,1565	0/0:40,0:39:99:0,105,2249	0/0:32,0:32:60.04:0,60,1715	0/0:18,0:18:51.17:0,51,1066	0/0:28,0:28:78.27:0,78,1707	0/0:30,0:30:72.20:0,72,1467	0/0:32,0:32:93.30:0,93,1999	0/0:47,0:45:45.63:0,46,1750	0/0:37,0:37:99:0,108,2162	1/1:11,15:24:24.15:618,24,0	0/1:30,0:28:1.97:2,0,1253	0/0:23,0:22:63.22:0,63,1345	0/0:25,0:25:69.24:0,69,1518	0/0:48,0:48:99:0,123,2668	0/0:32,0:32:93.28:0,93,1915	0/0:12,0:12:33.10:0,33,628	0/0:35,0:35:96.31:0,96,2067	0/0:36,0:36:41.43:0,41,1564	0/0:26,0:26:78.23:0,78,1547	0/0:18,0:18:54.08:0,54,1109	0/0:31,0:31:84.27:0,84,1793
chr10	4629876	.	AAGG	A	564.60	PASS	AB=0.941;AC=7;AF=0.125;AN=56;BaseQRankSum=10.393;DP=870;FS=33.607;HRun=0;HaplotypeScore=196.6766;InbreedingCoeff=0.1884;MQ=55.95;MQ0=0;MQRankSum=-6.730;QD=2.53;ReadPosRankSum=0.816;VQSLOD=1.0321;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:43,4:45:99:135,0,1693	0/0:15,0:15:45.14:0,45,925	0/0:31,0:20:42.07:0,42,777	0/0:50,0:29:53.26:0,53,1013	0/0:28,0:28:81.16:0,81,1663	0/0:28,0:28:81.19:0,81,1678	0/0:33,1:34:53.55:0,54,2039	0/1:38,1:35:10.82:11,0,1317	0/0:37,0:36:99:0,105,2243	0/0:29,1:30:32.40:0,32,1665	0/0:18,0:18:54.19:0,54,1171	0/0:29,0:29:84.23:0,84,1744	0/0:29,0:29:75.19:0,75,1507	0/0:32,0:32:93.31:0,93,2027	0/1:43,1:43:46.27:46,0,1707	0/0:35,0:35:96.33:0,96,2125	1/1:25,2:25:37.42:407,37,0	0/1:28,3:29:61.92:62,0,1280	0/0:23,0:23:69.22:0,69,1491	0/0:24,0:24:69.24:0,69,1510	0/0:49,0:49:99:0,135,2742	0/0:33,0:33:90.16:0,90,1873	0/0:13,0:13:30.10:0,30,642	0/0:33,0:33:96.31:0,96,2039	0/1:32,3:35:39.61:40,0,1435	0/0:25,0:25:69.13:0,69,1378	0/0:21,0:21:57.09:0,57,1158	0/0:30,0:30:81.28:0,81,1798
chr10	4630105	.	T	TTTTG	1516.42	PASS	AB=0.679;AC=5;AF=0.089;AN=56;BaseQRankSum=-5.809;DP=699;FS=10.527;HRun=0;HaplotypeScore=111.3629;InbreedingCoeff=0.7689;MQ=59.76;MQ0=3;MQRankSum=0.814;QD=21.98;ReadPosRankSum=2.968;VQSLOD=2.8106;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:43.88:0,44,1047	0/0:11,0:11:30.10:0,30,481	0/0:23,0:11:12.04:0,12,194	0/0:28,0:18:17.73:0,18,292	0/0:28,0:28:63.22:0,63,1022	0/0:21,0:21:51.17:0,51,827	0/0:24,0:24:42.14:0,42,655	0/0:34,0:35:51.12:0,51,711	0/0:18,0:18:36.11:0,36,561	0/0:32,0:31:66.21:0,66,1043	0/0:21,0:21:48.16:0,48,760	0/0:21,0:21:36.11:0,36,560	0/0:18,0:18:36.09:0,36,517	0/0:28,0:29:69.17:0,69,1046	1/1:5,19:26:27.09:649,27,0	0/0:20,0:20:45.15:0,45,724	0/0:27,0:26:69.20:0,69,1046	0/1:10,8:19:19.06:274,0,19	0/0:24,0:24:33.11:0,33,512	0/0:23,0:23:42.13:0,42,662	0/0:39,0:39:99:0,102,1579	0/0:26,0:26:63.20:0,63,967	0/0:17,0:17:36.11:0,36,555	0/0:24,0:24:54.14:0,54,848	1/1:6,15:23:30.10:722,30,0	0/0:28,0:28:39.10:0,39,607	0/0:34,0:34:75.23:0,75,1171	0/0:23,0:23:63.18:0,63,976
chr10	4632962	.	AGCTCGAGG	A	2963.11	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.742;DP=608;FS=4.816;HRun=0;HaplotypeScore=154.5279;InbreedingCoeff=0.9936;MQ=78.85;MQ0=0;MQRankSum=-8.108;QD=43.58;ReadPosRankSum=-1.668;VQSLOD=3.2242;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,33:41:63.09:1548,63,0	0/0:6,0:6:18.04:0,18,605	0/0:16,0:16:39.13:0,39,1298	0/0:15,0:15:33.08:0,33,1058	0/0:12,0:12:33.10:0,33,1364	0/0:19,0:19:57.16:0,57,2318	0/0:35,0:35:99:0,102,4123	1/1:5,22:27:60.16:1537,60,0	0/0:34,0:34:99:0,99,4242	0/0:18,0:18:51.17:0,51,1989	0/0:11,0:11:30.10:0,30,1272	0/0:18,0:18:51.15:0,51,1975	0/0:23,0:23:69.21:0,69,2928	0/0:31,0:31:87.28:0,87,3708	0/0:28,0:28:84.29:0,84,3633	0/0:23,0:23:69.24:0,69,2999	0/0:14,0:14:24.08:0,24,1021	0/0:23,0:23:66.23:0,66,2881	0/0:24,0:24:69.17:0,69,2593	0/0:12,0:12:36.12:0,36,1606	0/0:46,0:46:99:0,135,5795	0/0:14,0:14:36.11:0,36,1361	0/0:16,0:16:48.16:0,48,2072	0/0:37,0:37:99:0,111,4430	0/0:14,0:14:42.14:0,42,1860	0/0:26,0:26:78.27:0,78,3482	0/0:15,0:14:45.15:0,45,1840	0/0:10,0:10:27.09:0,27,1179
chr10	4633198	.	A	AG	86.52	PASS	AB=0.739;AC=1;AF=0.019;AN=54;BaseQRankSum=-2.745;DP=415;FS=3.863;HRun=7;HaplotypeScore=56.3881;InbreedingCoeff=0.0897;MQ=67.86;MQ0=6;MQRankSum=-0.466;QD=5.09;ReadPosRankSum=-2.480;VQSLOD=-0.7295;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:23:59.99:0,60,579	0/0:4,0:4:12.02:0,12,116	0/0:20,0:11:17.68:0,18,145	0/0:39,0:26:45.29:0,45,377	0/0:9,0:9:21.03:0,21,203	0/0:15,0:15:39.06:0,39,377	0/0:32,0:32:77.59:0,78,744	0/1:11,6:17:10.79:161,0,11	0/0:14,0:14:36.05:0,36,347	0/0:14,0:13:30.04:0,30,289	0/0:14,0:14:21.02:0,21,203	0/0:11,0:11:26.70:0,27,243	0/0:14,0:14:32.54:0,33,299	0/0:14,0:13:24.03:0,24,231	0/0:12,0:12:24.03:0,24,232	0/0:15,0:15:36.01:0,36,338	./.	0/0:8,0:8:18.03:0,18,174	0/0:11,0:11:26.99:0,27,251	0/0:12,0:12:26.75:0,27,251	0/0:20,0:20:19.32:0,19,345	0/0:10,0:10:20.99:0,21,197	0/0:11,0:11:24.03:0,24,232	0/0:9,0:10:14.97:0,15,135	0/0:17,0:17:35.93:0,36,343	0/0:22,0:22:54.08:0,54,518	0/0:18,0:18:42.02:0,42,396	0/0:6,0:5:9.01:0,9,87
chr10	4633220	.	GGAGA	G	158.24	PASS	AB=0.926;AC=17;AF=0.386;AN=44;BaseQRankSum=4.309;DP=376;FS=3.432;HRun=0;HaplotypeScore=69.7069;InbreedingCoeff=0.3427;MQ=51.34;MQ0=24;MQRankSum=-3.108;QD=1.05;ReadPosRankSum=1.187;VQSLOD=1.5169;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:19:1.77:5,2,0	0/0:6,0:6:9:0,9,113	./.	./.	1/1:8,0:8:0.89:2,1,0	0/0:14,0:14:3.01:0,3,51	0/0:26,0:25:16.63:0,17,315	./.	0/0:14,0:14:3.01:0,3,38	0/0:14,0:11:3.48:0,3,31	0/0:11,0:10:2.88:0,3,50	1/1:12,0:11:2.97:20,3,0	0/0:14,0:14:5.98:0,6,90	0/0:12,0:11:11.99:0,12,143	0/0:11,0:10:3.01:0,3,62	0/1:12,0:15:3.45:47,0,3	./.	1/1:7,0:7:2.89:23,3,0	0/0:14,0:13:5.98:0,6,49	1/1:9,0:8:0.89:2,1,0	0/0:15,0:15:5.80:0,6,105	./.	0/0:8,0:8:0:0,0,0	0/1:16,1:16:32.50:38,0,33	0/1:18,0:16:0.13:0,0,0	1/1:18,3:20:6.02:81,6,0	1/1:18,3:21:5.82:62,6,0	./.
chr10	4633879	.	CG	C	938.32	PASS	AB=0.900;AC=17;AF=0.386;AN=44;BaseQRankSum=4.680;DP=124;FS=0.000;HRun=9;HaplotypeScore=24.2542;InbreedingCoeff=0.6438;MQ=68.57;MQ0=0;MQRankSum=0.144;QD=14.00;ReadPosRankSum=3.697;VQSLOD=2.0831;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,8:11:24:220,24,0	./.	0/0:2,0:2:3.89:0,4,34	./.	0/0:1,0:1:3.01:0,3,35	0/0:3,0:3:7.26:0,7,72	0/0:8,0:8:15.03:0,15,164	1/1:5,6:11:11.89:109,12,0	0/0:3,0:3:5.61:0,6,45	./.	0/0:3,0:3:6.02:0,6,69	0/0:7,0:7:10.53:0,11,109	0/0:3,0:3:3.01:0,3,35	0/0:5,0:5:6.89:0,7,62	1/1:2,2:4:6:55,6,0	0/0:4,0:4:3.01:0,3,35	./.	1/1:3,11:14:33.02:302,33,0	0/0:5,0:5:9.01:0,9,94	./.	0/0:7,0:7:9.03:0,9,104	./.	0/0:3,0:3:9.03:0,9,104	0/1:8,1:9:3.43:3,0,203	1/1:1,4:5:11.99:110,12,0	1/1:0,3:3:9:82,9,0	1/1:0,7:7:18.01:164,18,0	1/1:1,2:3:6:55,6,0
chr10	4635401	.	AC	A	1504.84	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=6.251;DP=553;FS=5.227;HRun=10;HaplotypeScore=69.5192;InbreedingCoeff=0.6363;MQ=78.65;MQ0=1;MQRankSum=0.709;QD=8.27;ReadPosRankSum=2.685;VQSLOD=2.1778;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,17:23:47.98:416,48,0	0/0:10,0:10:21.04:0,21,221	0/0:29,1:22:2.40:0,2,183	0/1:27,0:21:30.48:30,0,78	0/0:21,0:21:42:0,42,432	0/0:21,0:21:37.38:0,37,477	0/0:23,0:23:62.90:0,63,627	0/1:32,0:32:36.81:37,0,83	0/0:20,0:20:48.03:0,48,495	0/0:27,0:27:57.10:0,57,591	0/0:16,0:16:12.57:0,13,303	0/0:16,0:16:41.98:0,42,434	0/0:12,0:12:33.04:0,33,335	0/0:18,0:18:39.09:0,39,422	1/1:4,14:18:16.83:313,17,0	0/0:18,2:20:13.05:0,13,372	1/1:2,0:23:34.63:102,35,0	1/1:2,17:19:47.99:417,48,0	0/1:20,0:20:2.97:3,0,365	0/0:15,0:15:23.95:0,24,239	0/0:11,0:11:24.06:0,24,265	0/0:23,0:23:18.38:0,18,398	0/0:10,1:11:24.94:0,25,258	0/0:25,1:26:15.01:0,15,543	1/1:0,20:19:41.99:365,42,0	0/0:17,1:18:1:0,1,226	0/0:29,0:29:50.50:0,50,734	0/0:4,0:4:8.99:0,9,81
chr10	4635720	.	GTGTGTGAA	G	58	PASS	AB=1.000;AC=5;AF=0.093;AN=54;BaseQRankSum=1.208;DP=377;FS=4.655;HRun=0;HaplotypeScore=121.3834;InbreedingCoeff=0.1214;MQ=44.38;MQ0=12;MQRankSum=-1.937;QD=1.04;ReadPosRankSum=-3.246;VQSLOD=1.3864;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:23,4:28:2.82:46,3,0	0/0:8,0:8:12.49:0,12,266	0/0:7,0:1:3.01:0,3,41	./.	0/0:13,0:13:15.47:0,15,321	0/0:14,0:14:26.96:0,27,726	0/0:18,0:18:23.95:0,24,468	0/1:13,0:11:84.98:85,0,209	0/0:23,0:23:49.57:0,50,1412	0/0:18,0:18:15.06:0,15,607	0/0:12,0:12:15.04:0,15,273	0/0:19,0:19:41.93:0,42,902	0/0:18,0:18:36.83:0,37,870	0/1:11,0:11:26.78:27,0,204	0/0:16,0:16:15.05:0,15,286	0/0:14,0:14:8.07:0,8,874	0/0:8,0:8:6.02:0,6,127	0/0:8,0:8:13.24:0,13,142	0/0:8,0:4:5.27:0,5,98	0/0:13,0:13:21.06:0,21,500	0/0:12,0:12:18.53:0,19,439	0/0:14,0:14:18.35:0,18,400	0/0:10,0:10:12.02:0,12,208	0/0:15,0:15:20.35:0,20,418	0/0:13,0:9:6.02:0,6,117	0/0:18,0:17:8.93:0,9,583	0/0:15,0:14:12.51:0,13,235	0/1:4,0:4:4.80:5,0,54
chr10	4635725	.	TGAAAGA	T	353.74	PASS	AB=1.000;AC=23;AF=0.442;AN=52;BaseQRankSum=-1.607;DP=346;FS=23.698;HRun=0;HaplotypeScore=112.1509;InbreedingCoeff=0.1019;MQ=43.08;MQ0=11;MQRankSum=0.994;QD=2.00;ReadPosRankSum=-3.055;VQSLOD=0.0170;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:0:0,0,0	1/1:7,0:7:3.32:9,3,0	./.	./.	0/1:12,0:12:1.05:1,0,18	0/0:13,0:13:2.01:0,2,134	0/1:16,0:16:9.79:10,0,67	1/1:9,0:7:15.61:103,16,0	0/0:22,0:22:3.74:0,4,261	0/0:17,0:17:37.38:0,37,341	0/1:11,0:11:3.57:4,0,35	0/1:18,0:18:13.04:13,0,221	0/0:14,0:14:16.72:0,17,252	0/1:11,0:11:32.44:32,0,74	1/1:14,0:14:2.29:6,2,0	0/0:16,0:16:4.83:0,5,234	1/1:8,0:8:2.60:10,3,0	1/1:7,0:7:4.79:31,5,0	0/1:6,0:3:9.09:9,0,13	0/1:13,0:13:12.79:13,0,72	0/0:10,0:10:3.36:0,3,21	0/0:13,0:13:8.02:0,8,96	1/1:8,0:8:5.62:27,6,0	0/1:17,0:17:12.18:12,0,126	0/0:13,0:9:2.97:0,3,20	0/1:17,0:16:3.30:181,0,3	0/0:5,8:12:0.47:0,0,1	1/1:2,0:3:5.86:37,6,0
chr10	4635727	.	AAAGAGAGAGAGG	A	1324.86	PASS	AB=0.973;AC=32;AF=0.615;AN=52;BaseQRankSum=-3.546;DP=317;FS=43.059;HRun=0;HaplotypeScore=125.0840;InbreedingCoeff=-0.2918;MQ=43.22;MQ0=14;MQRankSum=2.515;QD=4.66;ReadPosRankSum=1.178;VQSLOD=0.6933;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:6,19:25:0:0,0,0	0/1:7,0:7:17.90:82,0,18	./.	./.	0/1:10,0:10:3.77:46,0,4	0/1:13,0:13:2.86:3,0,56	0/1:15,0:15:23.25:83,0,23	1/1:9,0:7:17.97:223,18,0	0/1:20,0:19:87.17:87,0,282	0/1:15,0:14:35.24:35,0,468	0/1:10,0:10:12.85:39,0,13	0/1:18,0:18:17.90:18,0,348	0/1:14,0:14:20.95:21,0,286	0/1:11,0:11:32.25:32,0,162	1/1:13,0:13:8.03:56,8,0	0/1:14,0:14:2.13:2,0,184	1/1:4,0:4:2.60:10,3,0	1/1:6,0:6:8.92:78,9,0	0/1:6,0:3:9.89:58,0,10	0/1:13,0:13:20.93:50,0,21	1/1:9,0:9:6.71:43,7,0	0/1:13,0:13:21.40:21,0,27	1/1:8,0:8:6.01:62,6,0	0/1:16,0:16:62.34:62,0,258	0/0:13,0:8:2.97:0,3,20	1/1:12,0:12:21.24:333,21,0	0/0:8,0:7:0.89:0,1,2	1/1:3,0:3:4.20:22,4,0
chr10	4636677	.	GAC	G	370.89	PASS	AB=0.886;AC=19;AF=0.380;AN=50;BaseQRankSum=7.921;DP=716;FS=4.093;HRun=0;HaplotypeScore=112.5036;InbreedingCoeff=0.0462;MQ=59.56;MQ0=29;MQRankSum=-3.282;QD=1.11;ReadPosRankSum=1.447;VQSLOD=2.0513;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:35:5.68:28,6,0	0/0:6,0:6:8.83:0,9,80	./.	./.	0/1:20,3:24:41.54:42,0,303	0/0:21,0:22:32.92:0,33,365	0/0:26,0:26:36.09:0,36,517	0/1:13,0:18:1.18:9,0,1	0/1:12,2:14:12.10:12,0,250	0/0:28,0:28:37.63:0,38,423	0/1:5,2:7:24.12:24,0,81	0/1:24,4:28:54.62:55,0,421	0/1:18,3:21:30.24:30,0,371	0/0:17,4:22:2.81:0,3,394	./.	0/1:17,0:17:0.05:0,0,307	0/0:35,0:36:6.47:0,6,62	0/0:11,0:11:0.94:0,1,1	0/1:16,1:18:32.56:33,0,41	0/1:18,0:19:11.48:11,0,220	0/1:61,2:63:50.53:51,0,804	0/0:14,0:14:24.50:0,24,284	0/1:20,3:23:12.10:12,0,249	0/0:38,7:46:11.81:0,12,865	0/0:19,0:19:0:0,0,0	1/1:12,0:24:22.73:112,23,0	1/1:8,0:17:14.20:70,14,0	1/1:3,0:5:8.05:36,8,0
chr10	4636771	.	ATAT	A	1290.28	PASS	AB=0.987;AC=9;AF=0.161;AN=56;BaseQRankSum=8.968;DP=775;FS=39.334;HRun=0;HaplotypeScore=135.5524;InbreedingCoeff=0.5426;MQ=63.30;MQ0=7;MQRankSum=-7.677;QD=11.22;ReadPosRankSum=0.223;VQSLOD=1.6448;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,132,3165	0/0:7,0:7:18.06:0,18,440	0/0:58,1:27:68.89:0,69,1231	0/1:45,2:23:99:115,0,602	0/0:18,0:18:54.17:0,54,1264	0/0:14,0:14:39.13:0,39,957	0/0:36,0:36:99:0,105,2434	0/0:34,0:34:99:0,99,2343	0/0:31,0:31:90.27:0,90,2097	0/0:27,0:27:81.28:0,81,1962	0/0:13,0:13:39.09:0,39,888	0/0:29,0:29:87.27:0,87,2031	0/0:28,0:28:81.28:0,81,1981	0/0:39,0:39:99:0,111,2676	1/1:0,17:17:30.10:558,30,0	0/0:30,0:30:87.30:0,87,2116	0/1:21,0:20:99:194,0,202	1/1:1,11:12:27.09:477,27,0	0/0:12,0:12:36.12:0,36,831	0/0:22,0:22:66.21:0,66,1554	0/0:64,0:64:99:0,172,4098	0/0:30,0:30:87.30:0,87,2093	0/0:9,0:9:24.07:0,24,521	0/0:44,0:44:99:0,129,3069	1/1:0,4:4:3.01:56,3,0	0/0:31,0:31:90.31:0,90,2182	0/0:33,0:33:96.33:0,96,2333	0/1:12,0:12:41.70:42,0,669
chr10	4636774	.	T	TCACACACACACACACACA	639.60	PASS	AB=0.979;AC=6;AF=0.107;AN=56;BaseQRankSum=3.707;DP=772;FS=10.884;HRun=0;HaplotypeScore=358.3152;InbreedingCoeff=0.2332;MQ=64.01;MQ0=6;MQRankSum=-3.760;QD=5.61;ReadPosRankSum=-0.635;VQSLOD=0.1239;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,106,4003	0/0:7,0:7:18.04:0,18,687	0/0:59,0:26:31.84:0,32,570	0/1:47,0:25:20.60:21,0,415	0/0:17,0:17:45.15:0,45,1958	0/0:13,0:14:30.07:0,30,987	0/0:35,0:35:75.15:0,75,2559	0/0:37,0:38:54.11:0,54,1219	0/0:29,0:29:75.24:0,75,3084	0/0:28,0:28:66.13:0,66,2253	0/0:13,0:13:24.07:0,24,798	0/0:28,0:28:69.14:0,69,2439	0/0:27,0:27:74.54:0,75,2934	0/0:38,0:38:99:0,99,4206	0/1:18,0:18:51.39:51,0,655	0/0:30,0:30:63.14:0,63,2463	1/1:9,11:24:17.90:608,18,0	0/1:12,0:12:6.77:7,0,513	0/0:13,0:13:24.05:0,24,393	0/0:21,0:21:45.14:0,45,1840	0/0:66,0:66:99:0,135,5051	0/0:31,0:31:65.16:0,65,2638	0/0:7,0:7:15.05:0,15,664	0/0:43,0:44:95.26:0,95,4149	0/0:4,0:4:3.01:0,3,107	0/0:30,0:30:69.23:0,69,2901	0/0:32,0:32:84.22:0,84,2955	0/1:10,0:11:78.10:78,0,641
chr10	4638351	.	CACACACGT	C	2345.56	PASS	AB=0.924;AC=12;AF=0.214;AN=56;BaseQRankSum=6.384;DP=880;FS=31.297;HRun=0;HaplotypeScore=212.7420;InbreedingCoeff=0.3172;MQ=56.59;MQ0=16;MQRankSum=-2.017;QD=9.73;ReadPosRankSum=-4.567;VQSLOD=0.3756;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:40,0:40:40.84:41,0,1769	0/0:15,0:15:42.08:0,42,1222	0/0:43,0:10:14.07:0,14,271	0/0:42,0:10:23.44:0,23,205	0/0:27,0:27:69.06:0,69,2014	0/0:17,0:17:47.78:0,48,1417	0/0:43,0:43:99:0,118,3423	0/1:25,0:25:56.68:277,0,57	0/0:35,0:35:99:0,102,2839	0/0:35,0:35:93.30:0,93,3109	0/0:18,0:18:45.12:0,45,1348	0/0:40,0:40:99:0,99,3117	0/0:30,0:30:78.16:0,78,2025	0/0:41,0:41:99:0,114,3439	0/1:34,0:34:99:128,0,1728	0/0:38,0:38:99:0,108,3734	1/1:6,27:33:11.53:263,12,0	0/1:28,0:28:64.73:65,0,1335	0/0:22,0:21:51.13:0,51,1263	0/0:12,0:12:32.75:0,33,852	0/0:99,0:99:99:0,247,6555	0/0:25,0:25:72.16:0,72,2221	0/0:17,0:17:45.60:0,46,1254	0/0:40,0:40:99:0,117,3604	0/1:27,0:27:39.41:39,0,1375	0/1:4,22:26:60.86:1123,0,61	1/1:1,14:15:6.02:163,6,0	1/1:2,11:13:15.05:409,15,0
chr10	4638651	.	GGTTT	G	1530.71	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.295;DP=603;FS=15.771;HRun=0;HaplotypeScore=97.0914;InbreedingCoeff=0.8203;MQ=69.05;MQ0=10;MQRankSum=2.935;QD=18.90;ReadPosRankSum=1.142;VQSLOD=2.1928;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:11,34:44:40.26:887,40,0	0/0:7,0:7:15.05:0,15,356	0/0:23,0:15:2.87:0,3,15	0/0:35,0:22:12.43:0,12,158	0/0:24,0:24:30.10:0,30,706	0/0:20,0:20:29.84:0,30,642	0/0:23,0:23:42.07:0,42,830	0/0:29,0:26:35.95:0,36,490	0/0:13,0:13:24.08:0,24,572	0/0:20,0:20:33.11:0,33,696	0/0:18,0:18:24.08:0,24,553	0/0:23,0:23:51.12:0,51,1110	0/0:17,0:17:39.11:0,39,869	0/0:21,0:21:39.12:0,39,849	0/0:22,0:22:54.17:0,54,1235	0/0:9,0:12:21.07:0,21,443	1/1:11,25:36:48.16:764,48,0	0/0:18,0:18:36.10:0,36,793	0/0:20,0:19:18.05:0,18,350	0/0:20,0:20:36.12:0,36,858	0/0:28,0:28:42.14:0,42,998	0/0:25,0:25:51.17:0,51,1208	0/0:14,0:14:21.07:0,21,495	0/0:17,0:17:33.07:0,33,691	0/0:16,0:16:29.77:0,30,649	0/0:12,0:25:54:0,54,851	0/0:9,0:28:57.12:0,57,951	0/0:4,0:4:2.98:0,3,22
chr10	4639205	.	C	CTTTTT	834.44	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=1.239;DP=582;FS=3.144;HRun=6;HaplotypeScore=113.2634;InbreedingCoeff=0.6440;MQ=76.46;MQ0=2;MQRankSum=-1.689;QD=11.92;ReadPosRankSum=0.216;VQSLOD=-0.4919;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:36.90:0,37,1063	0/0:7,0:7:21.01:0,21,261	0/0:48,0:32:25.34:0,25,386	0/1:41,0:24:23.75:24,0,239	0/0:22,0:22:63.07:0,63,920	0/0:26,0:26:69.18:0,69,1193	0/0:12,0:12:36.07:0,36,530	0/0:39,0:39:84.97:0,85,1157	0/0:14,0:14:42.07:0,42,647	0/0:21,0:21:45.11:0,45,710	0/0:23,0:23:63.05:0,63,844	0/0:15,0:15:45.14:0,45,787	0/0:16,0:16:45.10:0,45,719	0/0:11,0:11:27.05:0,27,431	0/0:17,0:17:48.10:0,48,775	0/0:8,0:8:24.05:0,24,377	1/1:2,25:28:33.08:917,33,0	0/0:19,0:19:54.05:0,54,764	0/0:24,0:24:60.08:0,60,861	0/0:19,0:19:54.11:0,54,833	0/0:18,0:18:54.14:0,54,890	0/0:17,0:17:48.06:0,48,688	0/0:17,0:17:51.09:0,51,775	0/0:12,0:13:27.92:0,28,403	0/0:25,0:25:75.17:0,75,1181	0/0:17,0:17:45.11:0,45,677	0/0:19,0:19:54.08:0,54,816	0/0:19,0:19:51.09:0,51,801
chr10	4639665	.	GTTCA	G	2248.26	PASS	AB=0.944;AC=9;AF=0.161;AN=56;BaseQRankSum=8.473;DP=617;FS=1.133;HRun=0;HaplotypeScore=121.6420;InbreedingCoeff=0.8785;MQ=72.68;MQ0=0;MQRankSum=-0.738;QD=22.48;ReadPosRankSum=-0.488;VQSLOD=3.0526;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:63.22:0,63,1492	0/0:13,0:13:36.12:0,36,846	0/0:26,0:26:24.08:0,24,515	0/0:18,0:15:6.02:0,6,132	0/0:33,0:33:84.29:0,84,1986	0/0:21,0:21:48.16:0,48,1105	0/0:13,0:13:33.11:0,33,783	1/1:11,10:21:30.10:474,30,0	0/0:13,0:13:22.63:0,23,498	0/0:25,0:25:48.16:0,48,1152	0/0:30,0:30:69.24:0,69,1658	0/0:30,0:30:72.25:0,72,1714	0/0:15,0:15:27.09:0,27,628	0/0:18,0:18:39.12:0,39,891	1/1:10,18:28:51.17:821,51,0	0/0:20,0:20:51.18:0,51,1199	0/0:9,0:24:48.16:0,48,846	1/1:7,11:18:30.10:483,30,0	0/0:21,0:21:24.05:0,24,509	0/0:30,0:30:66.23:0,66,1563	0/1:16,1:17:3.15:3,0,967	0/0:28,0:29:26.93:0,27,1531	0/0:26,1:27:17.92:0,18,1445	0/0:17,0:17:36.12:0,36,862	1/1:3,13:16:39.13:628,39,0	0/0:12,0:18:42.14:0,42,715	0/0:10,0:27:51.03:0,51,841	0/0:5,0:20:45.07:0,45,715
chr10	4640149	.	A	AT	2083.69	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-9.140;DP=640;FS=8.269;HRun=3;HaplotypeScore=59.0157;InbreedingCoeff=0.9984;MQ=59.78;MQ0=5;MQRankSum=3.608;QD=34.73;ReadPosRankSum=2.697;VQSLOD=4.1211;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,144,1727	0/0:8,0:8:21.06:0,21,251	0/0:28,0:14:42.13:0,42,504	0/0:43,0:25:60.17:0,60,708	0/0:22,0:22:54.16:0,54,648	0/0:20,0:20:57.13:0,57,657	0/0:18,0:18:54.15:0,54,636	0/0:24,0:24:69.21:0,69,828	0/0:25,0:25:72.22:0,72,864	0/0:18,0:18:54.17:0,54,648	0/0:21,0:21:57.06:0,57,683	0/0:13,0:13:39.12:0,39,468	0/0:16,0:16:45.14:0,45,539	0/0:19,0:19:57.16:0,57,672	1/1:0,16:16:42.14:588,42,0	0/0:19,0:19:48.15:0,48,575	0/0:33,0:33:90.08:0,90,1080	1/1:1,24:25:66.22:924,66,0	0/0:19,0:19:54.17:0,54,648	0/0:20,0:20:60.14:0,60,703	0/0:34,0:34:99:0,99,1183	0/0:18,0:18:48.13:0,48,560	0/0:23,0:23:63.18:0,63,743	0/0:27,0:27:81.21:0,81,955	1/1:0,19:19:51.17:714,51,0	0/0:23,0:23:66.20:0,66,792	0/0:13,0:13:36.11:0,36,432	0/0:26,0:26:75.23:0,75,900
chr10	4640330	.	T	TTTTG	1317.34	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-6.173;DP=648;FS=3.076;HRun=0;HaplotypeScore=107.0833;InbreedingCoeff=0.9933;MQ=75.27;MQ0=0;MQRankSum=-2.450;QD=39.92;ReadPosRankSum=0.492;VQSLOD=3.8124;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:84.24:0,84,1370	0/0:9,0:9:24.03:0,24,346	0/0:31,0:29:38.24:0,38,753	0/0:30,0:27:33.10:0,33,523	0/0:17,0:17:42.13:0,42,679	0/0:20,0:20:48.15:0,48,776	0/0:22,0:22:57.11:0,57,913	0/0:36,0:36:72.25:0,72,1208	0/0:29,0:29:63.19:0,63,1030	0/0:26,0:26:69.22:0,69,1104	0/0:11,0:11:30.10:0,30,504	0/0:28,0:28:63.20:0,63,1022	0/0:19,0:19:51.17:0,51,856	0/0:22,0:22:51.15:0,51,796	0/0:22,0:22:36.06:0,36,514	0/0:14,0:14:33.08:0,33,514	1/1:6,26:33:57.20:1412,57,0	0/0:13,0:13:26.52:0,27,365	0/0:21,0:21:36.05:0,36,572	0/0:21,0:21:54.17:0,54,871	0/0:40,0:40:99:0,108,1810	0/0:18,0:18:45.14:0,45,721	0/0:12,0:12:24.08:0,24,401	0/0:31,0:30:78.25:0,78,1283	0/0:27,0:27:63.20:0,63,1033	0/0:22,0:22:57.18:0,57,910	0/0:16,0:15:36.12:0,36,591	0/0:22,0:22:57.10:0,57,870
chr10	4641202	.	TATCTGGTACC	T	5208.81	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=11.792;DP=791;FS=1.085;HRun=0;HaplotypeScore=231.7827;InbreedingCoeff=0.9896;MQ=84.31;MQ0=0;MQRankSum=-12.308;QD=62.76;ReadPosRankSum=1.851;VQSLOD=4.7642;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:58:99:0,163,7954	0/0:8,0:8:24.08:0,24,1237	0/0:27,0:27:69.18:0,69,3055	0/0:23,0:23:60.13:0,60,2242	0/0:9,0:9:27.09:0,27,1334	0/0:34,0:34:93.32:0,93,4727	0/0:36,0:36:96.30:0,96,4294	0/0:32,0:32:75.24:0,75,3326	0/0:41,0:41:99:0,123,6172	0/0:32,0:32:84.29:0,84,3946	0/0:7,0:7:18.06:0,18,825	0/0:39,0:39:99:0,111,5540	0/0:23,0:23:69.22:0,69,3378	0/0:46,0:46:99:0,123,6131	1/1:4,35:39:83.55:2678,84,0	0/0:32,0:32:93.32:0,93,4615	0/0:30,0:30:81.28:0,81,3943	1/1:6,16:22:33.11:997,33,0	0/0:31,0:31:87.29:0,87,3765	0/0:16,0:16:48.16:0,48,2387	0/0:54,0:54:99:0,160,7654	0/0:17,0:17:51.18:0,51,2540	0/0:11,0:11:24.08:0,24,1207	0/0:43,0:43:99:0,120,5952	1/1:5,17:22:48.16:1534,48,0	0/0:39,0:39:99:0,111,5475	0/0:15,0:15:45.15:0,45,2235	0/0:5,0:5:15.05:0,15,778
chr10	4642419	.	A	AGG	1131.93	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.045;DP=629;FS=7.815;HRun=0;HaplotypeScore=78.0621;InbreedingCoeff=0.9971;MQ=83.81;MQ0=0;MQRankSum=-2.346;QD=41.92;ReadPosRankSum=-4.959;VQSLOD=3.6261;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,160,2546	0/0:10,0:10:30.10:0,30,489	0/0:20,0:20:60.20:0,60,948	0/0:23,0:23:65.88:0,66,989	0/0:21,0:21:63.20:0,63,1001	0/0:22,0:22:63.21:0,63,1006	0/0:27,0:27:81.28:0,81,1318	1/1:4,23:27:80.80:1227,81,0	0/0:17,0:17:51.16:0,51,807	0/0:12,0:12:36.12:0,36,587	0/0:25,0:25:75.25:0,75,1199	0/0:24,0:24:69.23:0,69,1104	0/0:13,0:13:39.13:0,39,636	0/0:18,0:18:54.16:0,54,854	0/0:21,0:21:63.20:0,63,1005	0/0:17,0:17:51.17:0,51,808	0/0:33,0:33:93.32:0,93,1517	0/0:20,0:20:60.20:0,60,979	0/0:28,0:28:81.24:0,81,1267	0/0:29,0:29:78.25:0,78,1236	0/0:28,0:28:84.29:0,84,1349	0/0:13,0:13:36.11:0,36,562	0/0:21,0:21:63.22:0,63,1025	0/0:28,0:28:84.29:0,84,1371	0/0:18,0:18:54.18:0,54,875	0/0:27,0:27:81.23:0,81,1272	0/0:25,0:25:75.24:0,75,1195	0/0:8,0:8:24.06:0,24,362
chr10	4642420	.	AC	A	638.98	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.860;DP=622;FS=6.342;HRun=1;HaplotypeScore=65.7792;InbreedingCoeff=0.9971;MQ=84.45;MQ0=0;MQRankSum=-2.542;QD=22.82;ReadPosRankSum=-4.954;VQSLOD=1.9813;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,160,2513	0/0:10,0:10:30.10:0,30,479	0/0:20,0:20:58.08:0,58,911	0/0:23,0:23:60.12:0,60,943	0/0:21,0:21:63.20:0,63,979	0/0:20,0:20:60.20:0,60,956	0/0:27,0:27:81.25:0,81,1269	1/1:5,23:28:76.18:734,76,0	0/0:17,0:17:51.17:0,51,811	0/0:12,0:12:36.12:0,36,576	0/0:24,0:24:72.23:0,72,1126	0/0:23,0:23:69.21:0,69,1076	0/0:13,0:13:39.13:0,39,623	0/0:17,0:17:51.17:0,51,815	0/0:20,0:20:60.20:0,60,956	0/0:16,0:16:48.16:0,48,767	0/0:33,0:33:93.32:0,93,1485	0/0:20,0:20:60.20:0,60,952	0/0:28,0:28:84.25:0,84,1277	0/0:28,0:28:78.25:0,78,1222	0/0:28,0:28:84.19:0,84,1262	0/0:12,0:12:36.11:0,36,552	0/0:22,0:22:66.21:0,66,1018	0/0:29,0:29:87.28:0,87,1363	0/0:18,0:18:54.18:0,54,863	0/0:27,0:27:81.28:0,81,1284	0/0:25,0:25:75.24:0,75,1170	0/0:8,0:8:24.08:0,24,379
chr10	4642875	.	A	ACACACACAGG	410.87	PASS	AB=0.824;AC=2;AF=0.036;AN=56;BaseQRankSum=3.438;DP=944;FS=1.125;HRun=0;HaplotypeScore=287.7749;InbreedingCoeff=0.1725;MQ=70.27;MQ0=2;MQRankSum=-5.357;QD=6.52;ReadPosRankSum=-3.041;VQSLOD=1.7765;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:37:0:0,0,1	0/0:10,0:10:17.99:0,18,237	0/0:45,0:38:19.68:0,20,460	0/0:41,0:39:19:0,19,301	0/0:26,0:26:66.20:0,66,1771	0/0:28,0:28:63.19:0,63,1679	0/0:32,0:32:51.63:0,52,1232	0/0:48,0:47:36.01:0,36,669	0/0:37,0:37:84.27:0,84,2185	0/0:45,0:45:81.23:0,81,2079	0/0:28,0:28:60.18:0,60,1558	0/0:41,0:41:90.25:0,90,2303	0/0:29,0:29:57.18:0,57,1509	0/0:30,0:30:57.15:0,57,1345	0/0:31,0:31:63.14:0,63,1359	0/0:40,0:40:99:0,102,2862	0/1:16,18:35:64.77:485,0,65	0/1:28,0:28:5.39:5,0,1264	0/0:20,0:18:27.02:0,27,704	0/0:32,0:31:66.65:0,67,1622	0/0:57,0:56:99:0,117,2827	0/0:40,0:40:81.22:0,81,1974	0/0:28,0:27:39.08:0,39,795	0/0:53,0:53:99:0,112,2615	0/0:19,0:19:39.08:0,39,979	0/0:47,0:47:93.29:0,93,2434	0/0:21,0:21:45.11:0,45,1108	0/0:16,0:16:12.02:0,12,293
chr10	4642992	.	GACACAC	G	2131.85	PASS	AB=0.533;AC=3;AF=0.054;AN=56;BaseQRankSum=7.147;DP=886;FS=1.233;HRun=0;HaplotypeScore=200.7423;InbreedingCoeff=0.7520;MQ=56.68;MQ0=5;MQRankSum=-1.909;QD=19.92;ReadPosRankSum=-3.448;VQSLOD=2.8823;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:6,43:49:4.70:249,0,5	0/0:6,0:6:17.80:0,18,475	0/0:47,0:25:47.97:0,48,1015	0/0:39,0:23:39.10:0,39,985	0/0:23,0:23:63.13:0,63,1896	0/0:23,0:25:67.10:0,67,1947	0/0:34,0:36:83.43:0,83,2329	1/1:19,39:58:99:1989,108,0	0/0:27,0:27:65.78:0,66,2087	0/0:34,0:35:86.48:0,86,2613	0/0:25,0:25:68.96:0,69,2053	0/0:22,0:22:57.11:0,57,1309	0/0:31,0:31:69.19:0,69,2091	0/0:24,0:24:62.21:0,62,1791	0/0:27,0:27:60.08:0,60,1373	0/0:24,0:24:66.14:0,66,1784	0/0:32,0:31:65.51:0,66,1738	0/0:29,0:29:78.13:0,78,2237	0/0:19,0:21:45.15:0,45,1157	0/0:26,0:26:68.87:0,69,1943	0/0:83,0:83:99:0,205,5929	0/0:20,0:21:48.13:0,48,1386	0/0:25,0:25:69.08:0,69,1823	0/0:52,0:52:99:0,132,3934	0/0:22,0:23:57.16:0,57,1837	0/0:30,0:32:72.19:0,72,2000	0/0:18,0:19:54.05:0,54,1528	0/0:19,0:23:63.10:0,63,1487
chr10	4643129	.	ACACACGCACGCGCGCGCG	A	697.41	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.242;DP=584;FS=1.010;HRun=0;HaplotypeScore=265.3422;InbreedingCoeff=0.8981;MQ=60.54;MQ0=2;MQRankSum=-6.849;QD=31.70;ReadPosRankSum=-5.095;VQSLOD=1.6389;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:67.88:0,68,5541	0/0:5,0:5:15.04:0,15,873	0/0:16,0:13:12.01:0,12,220	0/0:19,0:11:12.03:0,12,141	0/0:20,0:20:45.08:0,45,2495	0/0:28,0:28:72.19:0,72,4718	0/0:31,0:31:74.87:0,75,5438	1/1:18,4:22:41.17:792,41,0	0/0:17,0:17:37.48:0,37,1410	0/0:33,0:33:84.23:0,84,4072	0/0:14,0:14:33.09:0,33,1714	0/0:10,0:10:18.03:0,18,578	0/0:9,0:9:21.02:0,21,1070	0/0:14,0:14:30.05:0,30,1548	0/0:11,0:11:24.07:0,24,1327	0/0:12,0:12:21.04:0,21,912	0/0:22,0:22:15.52:0,16,252	0/0:20,0:20:54.19:0,54,4227	0/0:22,0:20:51.14:0,51,2580	0/0:13,0:12:27.02:0,27,1034	0/0:52,0:52:99:0,111,5197	0/0:24,0:24:57.18:0,57,4237	0/0:20,0:19:46.42:0,46,3715	0/0:36,0:36:89.06:0,89,5661	0/0:17,0:17:51.14:0,51,2537	0/0:30,0:30:63.15:0,63,3009	0/0:13,0:13:36.08:0,36,1846	0/0:14,0:14:27.06:0,27,1723
chr10	4643141	.	GCGCGCGCACA	G	616.33	PASS	AB=1.000;AC=5;AF=0.093;AN=54;BaseQRankSum=5.583;DP=440;FS=2.657;HRun=0;HaplotypeScore=128.7864;InbreedingCoeff=0.7211;MQ=65.94;MQ0=3;MQRankSum=-3.890;QD=18.68;ReadPosRankSum=0.185;VQSLOD=2.3469;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:77.74:0,78,3569	0/0:5,0:5:15.05:0,15,610	0/1:5,0:5:15.25:15,0,43	./.	0/0:12,0:12:33.11:0,33,1496	0/0:23,0:23:69.21:0,69,3090	0/0:31,0:31:71.33:0,71,3347	1/1:9,0:9:12.04:268,12,0	0/0:12,0:12:23.26:0,23,829	0/0:21,0:21:54.18:0,54,2090	0/0:11,0:11:27.05:0,27,840	0/0:7,0:7:9.03:0,9,308	0/0:6,0:6:15.05:0,15,699	0/0:10,0:10:30.09:0,30,1088	0/0:8,0:8:21.07:0,21,755	0/0:7,0:7:15.04:0,15,542	1/1:2,16:18:15.05:454,15,0	0/0:25,0:25:69.24:0,69,3230	0/0:20,0:19:45.02:0,45,1735	0/0:8,0:8:21.07:0,21,930	0/0:31,0:31:60.66:0,61,2544	0/0:21,0:21:60.21:0,60,2733	0/0:21,0:20:56.91:0,57,2516	0/0:31,0:31:81.22:0,81,3430	0/0:17,0:17:36.11:0,36,1467	0/0:15,0:15:39.13:0,39,1765	0/0:14,0:14:33.10:0,33,1223	0/0:9,0:9:24.08:0,24,1106
chr10	4643358	.	CTCT	C	433.34	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.503;DP=646;FS=2.108;HRun=0;HaplotypeScore=88.5917;InbreedingCoeff=0.9978;MQ=62.17;MQ0=12;MQRankSum=-2.082;QD=20.64;ReadPosRankSum=2.084;VQSLOD=3.1088;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:37:95.66:0,96,1880	0/0:9,0:9:27.08:0,27,576	0/0:37,0:23:50.67:0,51,1134	0/0:45,0:26:65.91:0,66,970	0/0:20,0:20:57.17:0,57,1169	0/0:26,0:26:74.98:0,75,1617	0/0:27,0:27:60.71:0,61,1394	0/0:22,0:22:28.30:0,28,934	0/0:23,0:23:57.17:0,57,1180	0/0:19,0:19:54.16:0,54,1082	0/0:15,0:15:42.13:0,42,862	0/0:20,0:20:41.13:0,41,1164	0/0:22,0:22:63.11:0,63,1294	0/0:31,0:31:93.20:0,93,1933	0/0:20,0:20:57.19:0,57,1267	0/0:19,0:19:54.16:0,54,1140	1/1:0,21:21:33.07:528,33,0	0/0:16,0:16:48.12:0,48,1034	0/0:27,0:26:63.09:0,63,1077	0/0:15,0:15:42.11:0,42,838	0/0:35,0:36:96.25:0,96,1907	0/0:17,0:17:51.10:0,51,984	0/0:20,0:19:54.15:0,54,1185	0/0:28,0:28:75.10:0,75,1411	0/0:14,0:14:42.13:0,42,923	0/0:24,0:24:66.16:0,66,1384	0/0:18,0:18:51.14:0,51,1045	0/0:18,0:18:51.06:0,51,906
chr10	4643792	.	AC	A	4107.95	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=12.409;DP=639;FS=8.055;HRun=2;HaplotypeScore=73.9295;InbreedingCoeff=0.9999;MQ=70.08;MQ0=0;MQRankSum=-3.195;QD=34.81;ReadPosRankSum=-0.439;VQSLOD=3.5749;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,31:34:90.29:1166,90,0	0/0:14,0:14:42.14:0,42,630	0/0:14,0:14:42.14:0,42,607	0/0:19,0:18:39.11:0,39,575	0/0:27,0:27:81.27:0,81,1213	0/0:30,0:30:87.29:0,87,1304	0/0:22,0:22:63.19:0,63,917	1/1:0,21:21:63.19:804,63,0	0/0:14,0:14:42.13:0,42,606	0/0:35,0:35:99:0,99,1449	0/0:26,0:26:78.24:0,78,1137	0/0:18,0:18:54.17:0,54,791	0/0:16,0:16:48.15:0,48,700	0/0:22,0:22:63.18:0,63,903	1/1:1,20:21:60.19:778,60,0	0/0:22,0:22:66.22:0,66,989	0/0:21,0:21:63.20:0,63,921	1/1:1,13:14:33.11:428,33,0	0/0:25,0:25:69.21:0,69,1011	0/0:32,0:32:93.31:0,93,1391	0/0:30,0:30:90.30:0,90,1339	0/0:15,0:15:45.15:0,45,669	0/0:27,0:27:78.25:0,78,1150	0/0:23,0:23:66.22:0,66,978	1/1:0,28:28:72.23:931,72,0	0/0:23,0:23:66.22:0,66,990	0/0:29,0:29:84.28:0,84,1253	0/0:17,0:17:51.17:0,51,752
chr10	4643843	.	GA	G	4242.57	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=12.568;DP=574;FS=3.878;HRun=4;HaplotypeScore=68.7545;InbreedingCoeff=0.9723;MQ=62.01;MQ0=0;MQRankSum=-3.760;QD=33.94;ReadPosRankSum=-2.769;VQSLOD=4.3784;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:9,31:40:86.28:1201,86,0	0/0:14,0:14:42.13:0,42,610	0/0:10,0:8:24.05:0,24,279	0/0:8,0:7:5.46:0,5,156	0/0:31,0:31:93.26:0,93,1303	0/0:22,0:22:63.21:0,63,929	0/0:16,0:16:48.15:0,48,680	1/1:0,32:32:96.25:1172,96,0	0/0:15,0:15:45.13:0,45,635	0/0:35,0:35:99:0,105,1486	0/0:28,0:28:84.28:0,84,1232	0/0:18,0:18:54.17:0,54,785	0/0:8,0:8:24.06:0,24,321	0/0:14,0:14:42.12:0,42,589	1/1:0,10:10:30.10:386,30,0	0/0:17,0:17:51.16:0,51,736	0/0:32,0:32:92.31:0,92,1294	1/1:2,13:15:39.11:477,39,0	0/0:22,0:22:66.21:0,66,947	0/0:26,0:26:78.20:0,78,1065	0/0:14,0:14:42.11:0,42,588	0/0:10,0:10:30.10:0,30,446	0/0:20,0:20:60.18:0,60,857	0/0:13,0:13:36.09:0,36,485	1/1:3,25:28:81.24:1006,81,0	0/0:23,0:23:69.21:0,69,977	0/0:33,0:33:99:0,99,1432	0/0:20,0:20:60.19:0,60,876
chr10	4644892	.	GTCCA	G	2594.28	PASS	AC=14;AF=0.280;AN=50;BaseQRankSum=9.388;DP=756;FS=0.000;HRun=0;HaplotypeScore=118.9575;InbreedingCoeff=0.9675;MQ=54.49;MQ0=8;MQRankSum=2.082;QD=13.58;ReadPosRankSum=0.364;VQSLOD=2.7439;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:24,17:40:27.09:417,27,0	0/0:8,0:8:18.04:0,18,350	./.	./.	0/0:27,0:27:21.05:0,21,447	0/0:21,0:21:36.04:0,36,686	0/0:25,0:25:36.12:0,36,738	./.	0/0:33,0:33:62.99:0,63,1227	0/0:35,0:36:34.58:0,35,1075	0/0:15,0:15:18.06:0,18,422	0/0:41,0:41:72.14:0,72,1472	0/0:26,1:27:7.68:0,8,954	0/0:34,0:34:54.08:0,54,1072	1/1:12,20:32:33.11:510,33,0	0/0:32,0:32:50.97:0,51,996	0/0:21,0:21:14.47:0,14,180	1/1:8,11:18:20.81:318,21,0	0/0:25,0:21:18.06:0,18,423	0/0:21,0:21:33.11:0,33,737	0/0:38,1:39:34.83:0,35,1656	0/0:16,0:16:18.01:0,18,358	0/0:27,0:27:57.15:0,57,1098	0/0:18,0:39:33.10:0,33,548	1/1:8,14:21:21.07:325,21,0	1/1:20,14:33:42.02:563,42,0	1/1:15,8:23:12.04:185,12,0	1/1:5,15:20:30.10:464,30,0
chr10	4645993	.	C	CT	251.89	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-2.811;DP=601;FS=6.525;HRun=8;HaplotypeScore=54.9415;InbreedingCoeff=0.8826;MQ=57.09;MQ0=6;MQRankSum=1.207;QD=20.99;ReadPosRankSum=0.787;VQSLOD=3.5172;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:45.02:0,45,412	0/0:10,0:10:27.01:0,27,247	0/0:11,0:4:8.04:0,8,61	0/0:15,0:5:8.96:0,9,74	0/0:26,0:26:60.01:0,60,545	0/0:34,1:35:64.44:0,64,844	0/0:28,0:27:75:0,75,676	0/0:25,0:23:48:0,48,439	0/0:16,0:16:39.01:0,39,357	0/0:33,0:33:84.02:0,84,764	0/0:25,0:26:62.06:0,62,555	0/0:18,0:18:45:0,45,407	0/0:17,0:17:48.03:0,48,439	0/0:13,0:13:36.02:0,36,329	0/0:14,0:14:30.01:0,30,275	0/0:11,0:11:33.02:0,33,302	1/1:1,11:12:30.09:346,30,0	0/0:32,0:32:75.02:0,75,686	0/0:24,0:18:45.02:0,45,412	0/0:22,0:22:63.03:0,63,576	0/0:20,0:20:54.01:0,54,488	0/0:25,0:25:66.04:0,66,604	0/0:22,0:22:51.02:0,51,467	0/0:28,0:28:81.02:0,81,736	0/0:13,0:13:36.02:0,36,329	0/0:25,0:25:66.02:0,66,601	0/0:34,0:33:83.97:0,84,755	0/0:27,0:27:65.98:0,66,590
chr10	4646205	.	C	CAAAACAAAAAAA	9136.21	PASS	AB=0.547;AC=15;AF=0.268;AN=56;BaseQRankSum=6.508;DP=677;FS=10.126;HRun=0;HaplotypeScore=229.6838;InbreedingCoeff=0.8624;MQ=68.37;MQ0=14;MQRankSum=-10.708;QD=44.35;ReadPosRankSum=-2.983;VQSLOD=2.9287;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,0:35:18.05:733,18,0	0/0:8,0:8:18.05:0,18,577	0/0:29,0:22:36.51:0,37,734	0/0:38,0:30:57.90:0,58,1185	0/0:28,0:28:68.42:0,68,1892	0/0:27,0:27:69.16:0,69,1856	0/0:33,0:33:81.04:0,81,1746	1/1:31,0:28:45.43:1255,45,0	0/0:24,0:24:43.08:0,43,1796	0/0:33,0:32:84.17:0,84,2242	0/0:15,0:15:36.10:0,36,1043	0/0:15,0:15:36.09:0,36,1040	0/0:16,0:16:45.11:0,45,1125	0/0:21,0:21:50.06:0,50,1424	1/1:8,0:24:23.91:1049,24,0	0/0:18,0:18:51.14:0,51,1422	0/0:19,0:19:0.85:0,1,424	1/1:9,0:18:21.54:940,22,0	0/0:23,0:21:51.10:0,51,1098	0/0:19,0:19:42.11:0,42,1177	0/0:27,0:26:66.06:0,66,1694	0/0:25,0:25:65.94:0,66,2044	0/0:13,0:13:30.07:0,30,867	0/0:40,0:40:91.43:0,91,2717	1/1:7,0:15:15.05:760,15,0	0/1:6,15:33:14.52:3042,0,15	1/1:6,10:30:15.11:630,15,0	1/1:5,5:15:18.06:728,18,0
chr10	4646254	.	TTGTG	T	77.41	PASS	AB=0.986;AC=8;AF=0.154;AN=52;BaseQRankSum=1.185;DP=642;FS=4.751;HRun=0;HaplotypeScore=134.9171;InbreedingCoeff=0.0436;MQ=62.84;MQ0=23;MQRankSum=-0.645;QD=0.53;ReadPosRankSum=3.399;VQSLOD=2.4767;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:37:11.73:0,12,227	0/0:4,0:3:5.95:0,6,89	./.	./.	0/0:21,0:21:26.81:0,27,429	0/1:22,1:23:42.41:42,0,408	0/0:32,0:32:23.80:0,24,402	0/0:31,0:28:6.02:0,6,102	0/1:24,0:23:12.95:13,0,520	0/0:32,0:31:38.41:0,38,787	0/0:12,0:12:9.02:0,9,142	0/0:19,0:19:32.83:0,33,644	0/1:20,0:20:13.85:14,0,430	0/0:18,0:18:33.11:0,33,637	0/0:22,0:23:15.05:0,15,245	0/1:16,0:15:17.38:17,0,315	1/1:14,0:16:9.01:88,9,0	0/0:21,0:23:45.13:0,45,751	0/0:21,0:20:9.50:0,10,181	0/0:17,0:17:23.86:0,24,411	0/0:42,7:45:6.57:0,7,711	0/1:21,0:22:11.63:12,0,424	0/0:17,0:17:32.85:0,33,635	0/0:32,0:31:35.90:0,36,744	0/0:12,0:13:15.04:0,15,264	0/1:23,0:24:22.80:23,0,220	0/0:19,0:19:19.22:0,19,282	0/0:14,0:13:12.04:0,12,262
chr10	4646875	.	TA	T	4622.27	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=12.488;DP=497;FS=7.348;HRun=9;HaplotypeScore=49.7964;InbreedingCoeff=0.9602;MQ=67.41;MQ0=0;MQRankSum=-0.246;QD=22.22;ReadPosRankSum=2.087;VQSLOD=5.6408;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,21:22:60.03:549,60,0	0/0:5,0:5:15.04:0,15,173	0/0:10,0:7:8.93:0,9,68	0/0:12,0:10:14.73:0,15,128	0/0:31,0:31:84.15:0,84,941	0/0:23,0:23:69.19:0,69,787	0/0:14,0:14:30.05:0,30,331	1/1:6,23:29:40.65:587,41,0	0/0:13,0:13:36.09:0,36,402	0/0:18,0:18:51.13:0,51,566	0/0:18,0:18:42.12:0,42,483	0/0:22,0:22:54.14:0,54,606	0/0:10,0:10:30.07:0,30,335	0/0:17,0:17:39.07:0,39,435	1/1:3,17:20:45.02:412,45,0	0/0:24,0:24:60.11:0,60,658	1/1:2,19:21:54.03:494,54,0	1/1:4,17:21:45.02:412,45,0	0/0:16,0:16:42.11:0,42,468	0/0:22,0:22:54.14:0,54,613	0/0:11,0:11:30.09:0,30,346	0/0:7,0:7:6.02:0,6,69	0/0:12,0:12:27.08:0,27,312	0/0:4,0:4:9.03:0,9,104	1/1:3,23:26:66.03:604,66,0	1/1:3,22:25:66.03:604,66,0	1/1:3,16:19:42.02:384,42,0	1/1:2,23:25:63.03:576,63,0
chr10	4647566	.	A	AT	1659.94	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=-2.496;DP=621;FS=0.976;HRun=9;HaplotypeScore=65.4547;InbreedingCoeff=0.7810;MQ=76.15;MQ0=0;MQRankSum=0.294;QD=16.44;ReadPosRankSum=-0.854;VQSLOD=3.6266;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,46:52:99:1458,135,0	0/0:14,0:14:38.95:0,39,332	0/1:21,0:21:18.48:18,0,238	0/0:10,0:10:20.36:0,20,136	0/0:23,0:23:56.97:0,57,495	0/0:15,0:15:44.97:0,45,386	0/0:25,0:25:65.92:0,66,560	1/1:4,0:28:62.50:312,62,0	0/0:17,0:17:38.97:0,39,335	0/0:35,0:35:92.91:0,93,797	0/0:22,0:22:56.88:0,57,478	0/0:19,0:19:50.99:0,51,443	0/0:15,0:15:44.97:0,45,387	0/0:27,0:27:71.97:0,72,621	0/0:27,0:27:77.96:0,78,673	0/0:19,0:19:44.96:0,45,387	0/0:32,0:32:83.94:0,84,724	0/0:17,0:17:47.99:0,48,417	0/0:25,0:25:68.98:0,69,599	0/0:22,0:22:62.96:0,63,541	0/0:23,0:23:62.97:0,63,543	0/0:20,0:20:56.97:0,57,493	0/0:18,0:18:53.98:0,54,467	0/0:22,0:22:59.97:0,60,517	0/0:16,0:16:44.99:0,45,391	0/0:24,0:24:65.94:0,66,564	0/0:23,0:23:62.92:0,63,532	0/0:10,0:10:29.99:0,30,260
chr10	4648767	.	A	ATGTG	1325.12	PASS	AB=0.804;AC=13;AF=0.260;AN=50;BaseQRankSum=0.233;DP=693;FS=4.175;HRun=0;HaplotypeScore=120.8111;InbreedingCoeff=0.4028;MQ=62.56;MQ0=9;MQRankSum=-1.891;QD=6.28;ReadPosRankSum=-1.189;VQSLOD=2.4901;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:26:21.02:0,21,195	0/0:10,0:10:12.04:0,12,188	./.	./.	0/0:19,0:21:28.29:0,28,377	0/0:19,0:19:12.02:0,12,163	0/0:37,0:40:47.97:0,48,686	0/1:25,0:25:15.01:15,0,21	0/0:14,0:19:18.03:0,18,238	0/0:26,0:30:6.54:0,7,260	0/0:16,0:17:2.53:0,3,153	0/0:22,0:22:45.12:0,45,653	0/1:22,0:24:4.73:5,0,419	0/0:20,0:23:33.08:0,33,454	1/1:15,5:25:14.79:291,15,0	0/0:22,0:22:6.42:0,6,311	0/0:27,0:30:47.06:0,47,593	1/1:9,15:26:26.83:546,27,0	./.	0/0:16,0:16:18.05:0,18,258	0/0:31,0:33:17.65:0,18,216	1/1:10,7:21:8.71:154,9,0	0/0:12,0:12:12.02:0,12,162	0/0:48,0:52:28.91:0,29,835	0/1:10,8:21:23.38:355,0,23	0/1:25,0:36:33.73:55,0,34	1/1:14,0:22:10.98:49,11,0	0/1:3,0:9:15.93:16,0,38
chr10	4649432	.	G	GAC	8253.02	PASS	AB=0.583;AC=16;AF=0.286;AN=56;BaseQRankSum=-8.332;DP=899;FS=35.794;HRun=0;HaplotypeScore=113.8887;InbreedingCoeff=0.7927;MQ=59.88;MQ0=12;MQRankSum=0.524;QD=28.36;ReadPosRankSum=2.612;VQSLOD=3.4699;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:18,43:61:16.13:1505,16,0	0/0:3,0:3:9.03:0,9,109	0/0:48,0:25:38.95:0,39,443	0/0:69,0:39:59.49:0,59,644	0/0:16,0:17:27.03:0,27,311	0/0:31,0:31:81.23:0,81,971	0/0:19,0:20:37.72:0,38,403	1/1:14,29:44:56.82:1279,57,0	0/0:33,0:35:80.83:0,81,936	0/0:20,0:20:39.02:0,39,473	0/0:12,0:13:26.88:0,27,305	0/0:36,0:37:99:0,99,1154	0/0:19,0:19:54.14:0,54,641	0/0:28,0:31:66:0,66,752	1/1:6,29:32:23.81:883,24,0	0/0:31,0:32:75.06:0,75,886	0/1:11,26:37:99:846,0,106	1/1:5,24:31:26.84:931,27,0	0/0:25,0:25:59.97:0,60,678	0/0:12,0:12:27.08:0,27,327	0/0:108,0:114:99:0,240,2766	0/0:17,0:17:39.08:0,39,457	0/0:13,0:13:33.08:0,33,377	0/0:49,0:49:99:0,117,1402	0/1:3,8:11:18.35:222,0,18	1/1:5,23:29:5.40:1040,5,0	1/1:2,11:13:30.10:483,30,0	1/1:3,25:28:66.23:1063,66,0
chr10	4649666	.	CA	C	1681.53	PASS	AC=4;AF=0.077;AN=52;BaseQRankSum=5.557;DP=297;FS=15.132;HRun=1;HaplotypeScore=33.0122;InbreedingCoeff=0.8337;MQ=59.99;MQ0=18;MQRankSum=-1.902;QD=32.97;ReadPosRankSum=-4.152;VQSLOD=0.9497;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,15:15:42.14:586,42,0	./.	./.	0/0:9,0:6:3.43:0,3,132	0/0:6,0:6:12.04:0,12,192	0/0:12,0:11:33.11:0,33,527	0/0:10,0:10:24.08:0,24,374	1/1:0,36:29:87.29:1215,87,0	0/0:5,0:5:15.05:0,15,240	0/0:4,0:4:12.04:0,12,192	0/0:4,0:4:12.04:0,12,192	0/0:7,0:7:17.79:0,18,287	0/0:8,0:8:21.07:0,21,333	0/0:6,0:6:15.05:0,15,240	0/0:11,0:11:30.10:0,30,480	0/0:11,0:10:30.10:0,30,478	0/0:17,0:15:39.13:0,39,622	0/0:17,0:17:51.17:0,51,814	0/0:14,0:14:42.14:0,42,667	0/0:6,0:6:18.06:0,18,286	0/0:13,0:13:39.13:0,39,624	0/0:8,0:8:24.08:0,24,384	0/0:3,0:3:9.03:0,9,144	0/0:20,0:19:60.17:0,60,912	0/0:11,0:11:33.11:0,33,528	0/0:14,0:13:39.12:0,39,594	0/0:11,0:11:30.10:0,30,480	0/0:16,0:15:39.13:0,39,624
chr10	4649743	.	TTTA	T	770.27	PASS	AB=1.000;AC=12;AF=0.273;AN=44;BaseQRankSum=4.113;DP=194;FS=6.559;HRun=0;HaplotypeScore=42.4858;InbreedingCoeff=0.5429;MQ=32.28;MQ0=35;MQRankSum=-3.738;QD=8.96;ReadPosRankSum=1.504;VQSLOD=1.5710;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:4:10.42:101,10,0	0/0:1,0:1:3.01:0,3,34	./.	./.	0/0:11,0:11:12.92:0,13,145	0/0:9,0:7:15.05:0,15,292	0/0:6,0:6:6.02:0,6,74	0/1:26,0:18:99:234,0,248	0/0:3,0:3:3:0,3,25	0/0:7,0:4:9.03:0,9,135	0/0:8,0:6:12.04:0,12,187	0/0:6,0:6:9.03:0,9,128	0/0:4,0:3:6.02:0,6,74	./.	1/1:3,1:4:12.02:132,12,0	0/0:3,0:2:1.25:0,1,3	1/1:19,0:8:8.95:82,9,0	1/1:4,2:6:15.05:187,15,0	0/0:11,0:8:17.89:0,18,228	0/0:8,0:8:21.06:0,21,252	./.	./.	0/0:5,0:5:6.02:0,6,103	./.	1/1:6,2:7:15.05:180,15,0	0/0:9,0:9:3.35:0,3,203	0/0:9,0:9:6.62:0,7,70	0/1:19,0:17:1.83:2,0,35
chr10	4649746	.	A	AT	731.82	PASS	AB=0.684;AC=11;AF=0.250;AN=44;BaseQRankSum=3.369;DP=176;FS=8.488;HRun=3;HaplotypeScore=38.0391;InbreedingCoeff=0.6305;MQ=29.21;MQ0=35;MQRankSum=-3.315;QD=11.26;ReadPosRankSum=0.522;VQSLOD=0.8038;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,4:4:11.95:142,12,0	0/0:1,0:1:3.01:0,3,34	./.	./.	0/0:10,0:10:12.84:0,13,147	0/0:9,0:7:15.05:0,15,186	0/0:5,0:5:6.02:0,6,74	0/1:14,12:18:99:238,0,235	0/0:3,0:3:3:0,3,25	0/0:6,0:3:9.03:0,9,106	0/0:6,0:5:12.04:0,12,143	0/0:6,0:6:9.03:0,9,108	0/0:5,0:3:5.92:0,6,74	./.	1/1:2,2:4:11.61:104,12,0	0/0:2,0:1:1.25:0,1,3	1/1:15,4:8:11.96:114,12,0	1/1:2,4:6:14.22:132,14,0	0/0:10,0:6:17.89:0,18,199	0/0:8,0:8:21.06:0,21,252	./.	./.	0/0:5,0:5:6.02:0,6,74	./.	1/1:2,4:5:14.63:152,15,0	0/0:6,0:8:23.94:0,24,259	0/0:6,0:7:8.09:0,8,97	0/0:10,0:12:11.96:0,12,115
chr10	4649757	.	ATTTATTTATTTATTTAT	A	796.57	PASS	AB=1.000;AC=7;AF=0.159;AN=44;BaseQRankSum=3.643;DP=172;FS=3.789;HRun=0;HaplotypeScore=74.2959;InbreedingCoeff=0.4080;MQ=27.40;MQ0=41;MQRankSum=-1.642;QD=14.75;ReadPosRankSum=-2.731;VQSLOD=1.0623;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:2,0:5:11.71:0,12,299	0/0:1,0:1:3.01:0,3,120	./.	./.	0/0:7,0:7:9.50:0,10,276	0/0:10,0:8:15.05:0,15,971	0/0:3,0:3:6.02:0,6,266	0/1:31,0:16:59.57:60,0,1435	0/0:3,0:3:6.02:0,6,168	0/0:5,0:2:6.02:0,6,286	0/0:5,0:4:12.04:0,12,754	0/0:5,0:5:9.03:0,9,484	0/0:5,0:3:3.48:0,3,65	./.	1/1:4,1:5:5.13:212,5,0	0/0:2,0:2:0.38:0,0,1	0/0:18,0:7:6.89:0,7,182	1/1:6,2:8:10.43:346,10,0	0/0:8,0:4:9.03:0,9,559	0/0:4,0:4:12.04:0,12,639	./.	./.	0/0:4,0:4:6.02:0,6,357	./.	1/1:8,2:9:0.99:293,1,0	0/0:7,0:7:18.06:0,18,663	0/0:6,0:6:12.04:0,12,487	0/0:14,0:12:12.04:0,12,521
chr10	4649773	.	AT	A	414.04	PASS	AC=6;AF=0.136;AN=44;BaseQRankSum=4.089;DP=173;FS=0.000;HRun=3;HaplotypeScore=44.4914;InbreedingCoeff=0.6033;MQ=27.39;MQ0=39;MQRankSum=-2.889;QD=20.70;ReadPosRankSum=2.249;VQSLOD=2.9357;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:5:8.76:0,9,113	0/0:1,0:1:3.01:0,3,43	./.	./.	0/0:4,0:4:8.99:0,9,96	0/0:11,0:10:15.05:0,15,213	0/0:5,0:5:9.03:0,9,108	0/0:30,0:15:45.14:0,45,607	0/0:3,0:3:9.03:0,9,124	0/0:4,0:2:6.02:0,6,85	0/0:7,0:6:15.05:0,15,213	0/0:6,0:6:9.03:0,9,127	0/0:4,0:2:3.01:0,3,41	./.	1/1:2,2:4:9.03:106,9,0	0/0:4,0:4:5.62:0,6,80	0/0:17,0:7:7.96:0,8,66	1/1:3,4:7:18.05:213,18,0	0/0:8,0:3:9:0,9,105	0/0:6,0:6:12.04:0,12,163	./.	./.	0/0:3,0:3:6.02:0,6,85	./.	1/1:4,5:9:19.41:221,19,0	0/0:5,0:5:3.95:0,4,44	0/0:11,0:10:21.73:0,22,165	0/0:13,0:11:12.17:0,12,110
chr10	4649791	.	GATGT	G	1986.48	PASS	AB=0.563;AC=13;AF=0.250;AN=52;BaseQRankSum=7.335;DP=242;FS=3.620;HRun=0;HaplotypeScore=54.9966;InbreedingCoeff=0.7602;MQ=31.70;MQ0=49;MQRankSum=-0.285;QD=31.53;ReadPosRankSum=3.503;VQSLOD=3.4151;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:2,7:8:1:100,0,1	0/0:4,0:4:12.04:0,12,293	./.	0/0:5,0:1:3.01:0,3,55	0/0:8,0:8:2.99:0,3,78	0/0:10,0:8:9.03:0,9,239	0/0:8,0:7:15.05:0,15,368	0/0:31,0:15:36.12:0,36,919	0/0:6,0:6:15.05:0,15,372	0/0:6,0:3:9.03:0,9,163	0/0:11,0:11:15.05:0,15,336	0/0:9,0:9:24.08:0,24,611	0/0:6,0:4:12.04:0,12,317	0/0:6,0:6:15.05:0,15,347	1/1:0,8:8:15.05:277,15,0	0/0:9,0:9:15.05:0,15,346	0/0:16,0:7:12.04:0,12,238	1/1:1,10:11:24.08:447,24,0	0/0:8,0:4:9.03:0,9,238	0/0:10,0:10:18.06:0,18,449	./.	0/0:6,0:6:12.04:0,12,287	0/0:6,0:6:12.04:0,12,286	0/0:6,0:3:3.01:0,3,76	1/1:0,8:8:15.05:279,15,0	1/1:1,6:7:15.05:274,15,0	1/1:1,12:13:32.90:615,33,0	1/1:1,6:6:9.03:168,9,0
chr10	4651076	.	T	TTC	249.37	PASS	AB=0.579;AC=6;AF=0.107;AN=56;BaseQRankSum=7.376;DP=543;FS=20.554;HRun=0;HaplotypeScore=91.6391;InbreedingCoeff=-0.1088;MQ=77.36;MQ0=0;MQRankSum=-2.148;QD=3.56;ReadPosRankSum=-1.863;VQSLOD=0.6239;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,111,1378	0/0:8,0:8:21.07:0,21,342	0/0:15,0:15:39.03:0,39,548	0/0:8,0:8:24.05:0,24,361	0/0:11,0:11:33.11:0,33,532	0/0:18,0:18:54.18:0,54,876	0/0:34,0:34:99:0,102,1663	0/1:5,0:12:19.83:20,0,149	0/0:23,0:23:69.24:0,69,1124	0/0:17,0:17:48.16:0,48,767	0/0:14,0:14:42.13:0,42,647	0/0:27,0:27:78.27:0,78,1269	0/0:18,0:18:54.18:0,54,875	0/0:21,0:21:63.20:0,63,996	0/1:2,1:13:27.90:96,0,28	0/0:22,0:22:66.21:0,66,1053	0/0:8,0:43:22.28:0,22,149	0/1:4,0:18:44.14:178,0,44	0/0:13,0:13:39.13:0,39,636	0/0:15,0:15:45.15:0,45,730	0/0:45,0:45:99:0,135,2169	0/0:15,0:15:42.14:0,42,684	0/0:10,0:10:27.09:0,27,440	0/0:31,0:31:93.32:0,93,1516	0/1:2,0:7:30.81:51,0,31	0/1:5,0:15:22.30:22,0,75	0/0:9,0:26:14.51:0,15,203	0/1:1,0:5:0.03:0,0,39
chr10	4651551	.	CT	C	3809.34	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=11.147;DP=615;FS=0.000;HRun=1;HaplotypeScore=63.9254;InbreedingCoeff=0.9594;MQ=77.09;MQ0=0;MQRankSum=-0.304;QD=38.09;ReadPosRankSum=2.968;VQSLOD=4.1906;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,44:44:99:1715,123,0	0/0:3,0:3:8.99:0,9,114	0/0:11,0:11:22.65:0,23,270	0/0:18,0:18:7.45:0,7,341	0/0:21,0:21:63.19:0,63,936	0/0:26,0:26:75.18:0,75,1112	0/0:26,0:26:78.21:0,78,1128	0/0:19,0:19:42.14:0,42,631	0/0:35,0:35:99:0,105,1595	0/0:19,0:19:51.17:0,51,781	0/0:12,0:12:36.08:0,36,522	0/0:31,0:31:93.32:0,93,1449	0/0:27,0:27:81.28:0,81,1262	0/0:20,0:20:60.12:0,60,905	1/1:0,24:24:69.23:964,69,0	0/0:26,0:26:78.23:0,78,1150	0/0:40,0:40:99:0,120,1822	1/1:0,16:16:36.12:503,36,0	0/0:14,0:14:38.17:0,38,524	0/0:6,0:6:18.06:0,18,278	0/0:49,0:49:99:0,144,2070	0/0:14,0:14:36.11:0,36,535	0/0:16,0:16:45.12:0,45,653	0/0:26,0:26:78.14:0,78,1097	1/1:0,16:16:45.15:628,45,0	0/0:19,0:19:57.12:0,57,804	0/0:26,0:26:78.21:0,78,1151	0/0:11,0:11:33.09:0,33,492
chr10	4652395	.	G	GCAA	2007.98	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-0.226;DP=749;FS=9.723;HRun=0;HaplotypeScore=110.3554;InbreedingCoeff=0.9911;MQ=69.65;MQ0=0;MQRankSum=-4.961;QD=42.72;ReadPosRankSum=1.599;VQSLOD=5.2992;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,44:47:99:2103,99,0	0/0:12,0:12:36.12:0,36,576	0/0:16,0:16:33.51:0,34,456	0/0:11,0:11:30.09:0,30,431	0/0:21,0:21:57.19:0,57,912	0/0:24,0:24:69.22:0,69,1077	0/0:36,0:36:99:0,99,1518	0/0:33,0:33:75.22:0,75,1111	0/0:37,0:37:99:0,99,1560	0/0:28,0:28:81.24:0,81,1222	0/0:16,0:16:42.14:0,42,673	0/0:29,0:29:84.27:0,84,1319	0/0:27,0:27:72.19:0,72,1083	0/0:32,0:32:84.29:0,84,1343	0/0:33,0:33:81.27:0,81,1257	0/0:22,0:22:66.17:0,66,961	0/0:32,0:32:84.29:0,84,1337	0/0:17,0:17:51.17:0,51,810	0/0:22,0:22:49.96:0,50,752	0/0:21,0:21:57.19:0,57,905	0/0:58,0:58:99:0,166,2590	0/0:28,0:28:72.23:0,72,1114	0/0:18,0:18:45.14:0,45,699	0/0:25,0:25:69.23:0,69,1106	0/0:27,0:27:69.23:0,69,1087	0/0:32,0:32:84.29:0,84,1347	0/0:39,0:39:87.30:0,87,1394	0/0:6,0:6:18.04:0,18,264
chr10	4652474	.	ACTCACTCGCTAGCCG	A	7365.36	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=12.108;DP=624;FS=15.890;HRun=0;HaplotypeScore=262.6119;InbreedingCoeff=0.9969;MQ=91.96;MQ0=0;MQRankSum=-12.341;QD=86.65;ReadPosRankSum=1.631;VQSLOD=3.3822;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,25:37:78.27:3086,78,0	0/0:8,0:8:24.08:0,24,1743	0/0:35,0:35:99:0,105,6547	0/0:27,0:27:81.19:0,81,4498	0/0:15,0:15:42.14:0,42,2419	0/0:16,0:16:48.16:0,48,3141	0/0:24,0:24:72.25:0,72,4762	0/0:30,0:30:87.30:0,87,5350	0/0:29,0:28:87.30:0,87,5639	0/0:23,0:23:69.23:0,69,4453	0/0:15,0:15:42.14:0,42,2676	0/0:23,0:23:69.24:0,69,4738	0/0:22,0:22:63.22:0,63,4711	0/0:23,0:23:69.24:0,69,4792	1/1:5,17:22:45.15:2025,45,0	0/0:30,0:30:90.31:0,90,6477	0/0:33,0:33:99:0,99,6866	1/1:3,7:10:18.06:810,18,0	0/0:20,0:20:54.19:0,54,3295	0/0:16,0:16:45.15:0,45,2909	0/0:41,0:41:99:0,120,7895	0/0:21,0:21:60.21:0,60,4052	0/0:12,0:12:30.10:0,30,1952	0/0:21,0:21:63.22:0,63,4345	1/1:5,11:16:33.11:1445,33,0	0/0:21,0:21:60.21:0,60,4151	0/0:18,0:18:54.19:0,54,3431	0/0:16,0:16:48.16:0,48,3485
chr10	4652901	.	TG	T	1557.65	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=10.892;DP=717;FS=0.530;HRun=5;HaplotypeScore=78.6984;InbreedingCoeff=0.9995;MQ=79.01;MQ0=1;MQRankSum=-2.120;QD=25.12;ReadPosRankSum=2.183;VQSLOD=3.1068;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,129,1657	0/0:16,0:16:48.15:0,48,640	0/0:26,0:26:72.21:0,72,932	0/0:28,0:27:68.40:0,68,840	0/0:26,0:26:72.24:0,72,983	0/0:28,0:28:60.47:0,60,1029	0/0:26,0:26:66.22:0,66,903	0/0:25,0:25:75.24:0,75,1011	0/0:24,0:24:72.22:0,72,965	0/0:34,0:34:99:0,99,1352	0/0:26,0:26:69.23:0,69,942	0/0:27,0:27:69.21:0,69,913	0/0:21,0:21:63.18:0,63,829	0/0:27,0:27:72.19:0,72,935	1/1:3,17:20:51.14:578,51,0	0/0:18,0:18:48.16:0,48,657	0/0:36,0:36:99:0,99,1338	1/1:0,15:15:33.09:374,33,0	0/0:28,0:28:78.24:0,78,1032	0/0:32,0:32:90.24:0,90,1166	0/0:33,0:33:87.26:0,87,1157	0/0:23,0:23:63.20:0,63,845	0/0:29,0:29:75.25:0,75,1020	0/0:21,0:21:60.20:0,60,820	1/1:1,26:27:66.19:748,66,0	0/0:24,0:24:63.21:0,63,854	0/0:22,0:21:54.18:0,54,730	0/0:9,0:9:27.09:0,27,368
chr10	4653080	.	G	GAAAA	5812.75	PASS	AB=0.514;AC=17;AF=0.304;AN=56;BaseQRankSum=14.793;DP=573;FS=9.663;HRun=4;HaplotypeScore=139.7449;InbreedingCoeff=0.9126;MQ=87.84;MQ0=0;MQRankSum=-13.476;QD=61.19;ReadPosRankSum=3.341;VQSLOD=3.5533;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,12:12:36.12:817,36,0	0/0:11,0:11:33.11:0,33,678	0/0:27,0:27:74.92:0,75,1224	0/0:21,0:21:33.21:0,33,924	0/0:37,0:36:99:0,108,2096	0/0:23,0:23:69.20:0,69,1341	0/0:26,0:26:78.25:0,78,1584	1/1:2,6:9:20.59:436,21,0	0/0:22,0:22:63.20:0,63,1279	0/0:37,0:37:99:0,111,2290	0/0:19,0:19:57.04:0,57,1013	0/0:27,0:27:78.25:0,78,1596	0/0:30,0:30:90.31:0,90,1882	0/0:32,0:32:90.29:0,90,1845	1/1:0,15:15:45.15:1021,45,0	0/0:22,0:22:66.21:0,66,1330	1/1:0,5:6:6.41:263,6,0	1/1:2,4:6:15.05:352,15,0	0/0:27,0:27:81.14:0,81,1613	0/0:18,0:18:51.17:0,51,1037	0/0:26,0:26:72.25:0,72,1491	0/0:29,0:29:81.28:0,81,1694	0/0:21,0:21:63.22:0,63,1274	0/0:23,0:23:69.19:0,69,1397	1/1:1,8:9:27.08:578,27,0	0/1:1,16:19:5.74:1155,0,6	1/1:0,10:12:36.12:824,36,0	1/1:0,5:6:17.98:366,18,0
chr10	4653081	.	T	TGGAGAGAG	9853.34	PASS	AB=0.529;AC=17;AF=0.304;AN=56;BaseQRankSum=14.670;DP=566;FS=10.875;HRun=0;HaplotypeScore=169.7623;InbreedingCoeff=0.9074;MQ=87.49;MQ0=0;MQRankSum=-13.656;QD=108.28;ReadPosRankSum=4.202;VQSLOD=5.7401;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,12:12:36.12:1420,36,0	0/0:11,0:11:33.09:0,33,864	0/0:27,0:27:73.48:0,73,1834	0/0:20,0:20:50.76:0,51,1443	0/0:36,0:35:99:0,108,3110	0/0:23,0:23:69.24:0,69,1996	0/0:26,0:26:78.25:0,78,2178	1/1:3,6:9:24.07:809,24,0	0/0:22,0:22:66.20:0,66,1883	0/0:37,0:37:99:0,111,3245	0/0:19,0:19:54.18:0,54,1446	0/0:27,0:27:81.26:0,81,2307	0/0:30,0:30:90.31:0,90,2688	0/0:32,0:32:93.31:0,93,2631	1/1:0,15:15:45.15:1757,45,0	0/0:22,0:22:66.21:0,66,1870	1/1:1,5:6:18.04:549,18,0	1/1:1,4:5:12.51:480,13,0	0/0:27,0:27:81.27:0,81,2331	0/0:18,0:18:54.16:0,54,1504	0/0:26,0:26:75.24:0,75,2171	0/0:29,0:29:87.28:0,87,2497	0/0:21,0:21:63.20:0,63,1840	0/0:22,0:22:66.23:0,66,1966	1/1:0,8:8:24.08:945,24,0	0/1:2,16:18:36.74:1875,0,37	1/1:2,10:11:36.08:1318,36,0	1/1:1,5:6:18.06:702,18,0
chr10	4654842	.	TTCC	T	1361.13	PASS	AB=1.000;AC=18;AF=0.321;AN=56;BaseQRankSum=10.364;DP=392;FS=37.210;HRun=0;HaplotypeScore=97.5293;InbreedingCoeff=-0.0172;MQ=61.47;MQ0=2;MQRankSum=-7.816;QD=7.36;ReadPosRankSum=3.010;VQSLOD=1.2687;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:24.04:0,24,461	0/1:5,0:5:34.22:34,0,75	0/0:31,0:19:15.06:0,15,495	0/0:29,0:17:18.20:0,18,380	0/1:5,0:5:9.59:10,0,233	0/0:13,0:13:36.12:0,36,755	0/1:13,0:13:23.04:23,0,405	0/1:18,0:18:28.05:28,0,800	0/1:19,0:19:0.50:0,0,764	0/1:12,0:12:18.48:18,0,492	0/1:12,0:12:29.05:29,0,535	0/0:11,0:11:9.81:0,10,545	0/1:16,0:16:41.53:42,0,590	0/1:18,0:18:64.80:65,0,729	1/1:4,10:14:36.07:496,36,0	0/0:15,0:15:17.46:0,17,735	0/1:13,0:13:9.99:10,0,569	1/1:0,3:3:9.03:135,9,0	0/0:11,0:11:1.31:0,1,399	0/0:14,0:14:12.60:0,13,612	0/0:14,0:14:33.11:0,33,695	0/0:22,0:22:37.43:0,37,1159	0/1:11,0:11:99:99,0,341	0/0:16,0:16:16.38:0,16,771	1/1:1,9:10:30.10:451,30,0	0/0:11,0:11:6.31:0,6,538	0/1:16,0:15:88.24:88,0,520	0/0:11,0:11:4.62:0,5,542
chr10	4655912	.	ATTT	A	4227.67	PASS	AB=0.553;AC=13;AF=0.232;AN=56;BaseQRankSum=14.526;DP=498;FS=16.012;HRun=4;HaplotypeScore=110.7004;InbreedingCoeff=0.8990;MQ=65.11;MQ0=0;MQRankSum=-13.885;QD=38.09;ReadPosRankSum=4.155;VQSLOD=2.7041;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,14:20:42.11:696,42,0	0/0:13,0:13:39.13:0,39,922	0/0:24,0:23:59.39:0,59,1409	0/0:16,0:15:42.14:0,42,958	0/0:31,0:31:93.32:0,93,2198	0/0:19,0:19:57.20:0,57,1348	0/0:7,0:7:21.07:0,21,455	0/0:34,0:34:96.31:0,96,2125	0/0:20,0:20:60.19:0,60,1285	0/0:16,0:16:48.16:0,48,1124	0/0:18,0:18:51.17:0,51,1205	0/0:15,0:15:42.14:0,42,989	0/0:21,0:21:63.22:0,63,1472	0/0:13,0:13:39.13:0,39,900	1/1:2,10:12:30.10:499,30,0	0/0:19,0:19:54.19:0,54,1276	0/0:35,0:35:99:0,99,2144	1/1:3,10:13:30.10:495,30,0	0/0:19,0:20:57.67:0,58,1326	0/0:27,0:27:78.27:0,78,1843	0/0:8,0:8:24.08:0,24,548	0/0:7,0:7:21.03:0,21,427	0/0:11,0:11:33.11:0,33,761	0/0:13,0:13:39.13:0,39,922	1/1:1,15:16:45.15:748,45,0	0/1:4,17:21:16.79:793,0,17	1/1:7,13:20:39.13:648,39,0	1/1:2,7:9:21.07:349,21,0
chr10	4657017	.	AACACACATACAAACACAC	A	8451.03	PASS	AB=0.533;AC=15;AF=0.268;AN=56;BaseQRankSum=12.601;DP=822;FS=1.502;HRun=0;HaplotypeScore=380.2807;InbreedingCoeff=0.8855;MQ=62.33;MQ0=5;MQRankSum=-10.147;QD=50.30;ReadPosRankSum=2.306;VQSLOD=3.2464;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,40:43:21.07:1005,21,0	0/0:15,0:15:36.12:0,36,2471	0/0:40,0:24:54.86:0,55,1579	0/0:42,0:30:69.22:0,69,3120	0/0:21,0:21:54.19:0,54,3885	0/0:22,0:22:66.21:0,66,4118	0/0:36,0:36:96.29:0,96,4816	0/0:27,0:27:66.23:0,66,3411	0/0:36,0:36:99:0,99,6795	0/0:43,0:43:99:0,120,7464	0/0:20,0:20:51.18:0,51,3799	0/0:27,0:27:75.26:0,75,5808	0/0:24,0:24:66.23:0,66,4453	0/0:36,0:36:99:0,102,6745	1/1:10,6:16:24.08:1126,24,0	0/0:32,0:32:90.31:0,90,6697	1/1:14,3:17:30.07:811,30,0	1/1:7,0:7:6.02:233,6,0	0/0:28,0:28:75.24:0,75,3385	0/0:22,0:22:66.21:0,66,3692	0/0:76,0:75:99:0,217,13802	0/0:33,0:33:84.26:0,84,5072	0/0:26,0:26:69.24:0,69,4590	0/0:48,0:48:99:0,142,9104	1/1:13,5:18:15.04:629,15,0	1/1:5,28:33:72.18:2251,72,0	1/1:1,17:18:30.10:1512,30,0	0/1:2,14:16:99:883,0,494
chr10	4657025	.	T	TGC	552	PASS	AB=0.878;AC=8;AF=0.143;AN=56;BaseQRankSum=7.082;DP=819;FS=3.417;HRun=0;HaplotypeScore=159.6564;InbreedingCoeff=0.3553;MQ=58.62;MQ0=7;MQRankSum=-3.574;QD=4.64;ReadPosRankSum=-0.930;VQSLOD=2.8415;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:40,0:40:19.90:20,0,43	0/0:14,0:14:39.13:0,39,635	0/0:46,0:22:57.44:0,57,793	0/0:49,0:27:72.05:0,72,1050	0/0:22,0:22:66.21:0,66,1050	0/0:25,0:25:72.23:0,72,1145	0/0:34,0:34:99:0,102,1590	0/0:28,0:28:78.25:0,78,1227	0/0:37,0:37:99:0,111,1755	0/0:43,0:43:99:0,129,1995	0/0:18,0:18:54.18:0,54,877	0/0:27,0:27:78.25:0,78,1248	0/0:24,0:24:72.25:0,72,1173	0/0:35,0:35:99:0,105,1688	0/1:11,5:16:35.25:55,0,35	0/0:34,0:34:93.32:0,93,1514	1/1:9,6:15:8:179,8,0	1/1:3,2:5:6.02:77,6,0	0/0:27,0:27:81.26:0,81,1281	0/0:22,0:22:66.20:0,66,1019	0/0:78,0:77:99:0,226,3579	0/0:30,0:30:84.26:0,84,1321	0/0:23,0:23:69.23:0,69,1100	0/0:50,0:50:99:0,141,2236	0/1:10,5:15:11.67:12,0,27	0/1:28,0:28:16.32:346,0,16	0/0:17,0:18:27.45:0,27,119	0/0:16,0:16:22.49:0,22,169
chr10	4657030	.	A	ATG	174.61	PASS	AB=0.863;AC=6;AF=0.107;AN=56;BaseQRankSum=6.360;DP=818;FS=21.571;HRun=0;HaplotypeScore=159.4282;InbreedingCoeff=0.1642;MQ=56.60;MQ0=9;MQRankSum=-3.653;QD=1.71;ReadPosRankSum=0.128;VQSLOD=1.4414;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:40,0:40:35.88:36,0,44	0/0:15,0:15:41.63:0,42,660	0/0:47,0:19:47.85:0,48,679	0/0:52,1:25:69.02:0,69,1058	0/0:24,0:24:72.25:0,72,1166	0/0:25,0:25:72.25:0,72,1164	0/0:36,0:36:99:0,102,1518	0/0:28,0:28:81.28:0,81,1310	0/0:37,0:37:99:0,111,1778	0/0:38,0:37:99:0,111,1767	0/0:18,0:18:54.18:0,54,878	0/0:28,0:28:81.28:0,81,1316	0/0:24,0:24:72.23:0,72,1140	0/0:34,0:34:99:0,102,1642	0/1:10,5:15:46.70:54,0,47	0/0:35,0:35:99:0,99,1613	0/1:8,6:14:49.95:50,0,90	1/1:3,2:5:6.02:77,6,0	0/0:25,0:25:75.24:0,75,1166	0/0:21,0:21:60.20:0,60,969	0/0:79,0:78:99:0,220,3492	0/0:29,0:29:81.28:0,81,1303	0/0:25,0:25:69.24:0,69,1113	0/0:47,0:47:99:0,132,2128	0/0:9,5:14:1.43:0,1,32	0/1:28,0:28:80.14:80,0,142	0/0:18,0:18:28.41:0,28,140	0/0:16,0:16:23.07:0,23,182
chr10	4657032	.	A	ATG	531.31	PASS	AB=0.947;AC=8;AF=0.143;AN=56;BaseQRankSum=6.979;DP=815;FS=13.019;HRun=0;HaplotypeScore=155.5638;InbreedingCoeff=0.2771;MQ=56.64;MQ0=10;MQRankSum=-4.658;QD=4.92;ReadPosRankSum=-0.462;VQSLOD=2.2548;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:40,0:40:44.59:52,0,45	0/0:16,0:16:44.64:0,45,707	0/0:50,0:21:51.02:0,51,697	0/0:54,0:26:72.07:0,72,1131	0/0:24,0:23:69.24:0,69,1126	0/0:25,0:25:75.26:0,75,1209	0/0:34,0:34:96.31:0,96,1517	0/0:28,0:28:81.28:0,81,1312	0/0:38,0:38:99:0,111,1800	0/0:36,0:35:99:0,105,1704	0/0:18,0:18:54.18:0,54,878	0/0:28,0:28:81.28:0,81,1315	0/0:26,0:26:72.23:0,72,1137	0/0:33,0:33:99:0,99,1593	0/1:11,4:15:41.34:106,0,41	0/0:37,0:37:99:0,105,1662	1/1:11,0:11:1.06:137,1,0	1/1:3,1:4:6.02:81,6,0	0/0:23,0:23:69.23:0,69,1097	0/0:20,0:20:57.19:0,57,908	0/0:82,0:81:99:0,226,3616	0/0:28,0:28:75.26:0,75,1213	0/0:25,0:25:69.24:0,69,1120	0/0:48,0:48:99:0,132,2125	0/1:10,0:10:13.77:14,0,28	0/1:28,0:28:50.52:271,0,51	0/0:18,0:18:28.41:0,28,139	0/0:16,0:16:23.07:0,23,181
chr10	4657056	.	GCACACACATGCA	G	2078.75	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=7.719;DP=827;FS=6.769;HRun=0;HaplotypeScore=314.3818;InbreedingCoeff=0.9580;MQ=57.37;MQ0=9;MQRankSum=-7.085;QD=62.99;ReadPosRankSum=1.894;VQSLOD=2.1154;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:58:75.25:0,75,2932	0/0:11,0:11:33.11:0,33,1611	0/0:53,0:31:73.13:0,73,3074	0/0:53,0:30:57.67:0,58,2611	0/0:28,0:27:69.24:0,69,3649	0/0:21,0:21:57.20:0,57,2682	0/0:22,0:22:58.01:0,58,2512	0/0:33,0:33:81.28:0,81,3653	0/0:36,0:36:87.30:0,87,4405	0/0:39,0:38:96.33:0,96,5048	0/0:17,0:17:42.14:0,42,2102	0/0:30,0:30:72.20:0,72,3770	0/0:26,0:26:75.26:0,75,4000	0/0:29,0:29:78.27:0,78,4132	1/1:0,8:10:27.09:957,27,0	0/0:39,0:39:99:0,102,5536	1/1:2,4:8:14.64:379,15,0	1/1:2,1:4:5.11:160,5,0	0/0:29,0:29:78.22:0,78,3287	0/0:19,0:18:45.15:0,45,2556	0/0:78,0:78:99:0,205,10444	0/0:26,0:26:66.23:0,66,3622	0/0:22,0:22:45.15:0,45,2401	0/0:48,0:48:99:0,123,6561	1/1:1,9:11:20.63:733,21,0	0/0:25,0:25:50.24:0,50,1530	0/0:29,0:29:66.04:0,66,2098	0/0:22,0:22:48.16:0,48,1927
chr10	4657068	.	A	ACG	966.42	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=8.211;DP=845;FS=7.216;HRun=0;HaplotypeScore=182.9600;InbreedingCoeff=0.9757;MQ=60.43;MQ0=7;MQRankSum=-7.648;QD=16.11;ReadPosRankSum=1.151;VQSLOD=2.9753;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:58:96.33:0,96,1465	0/0:12,0:12:36.08:0,36,488	0/0:51,0:36:95.96:0,96,1378	0/0:45,0:27:66.19:0,66,978	0/0:24,0:24:72.24:0,72,1091	0/0:19,0:19:54.10:0,54,718	0/0:25,0:25:69.12:0,69,905	0/0:33,0:33:96.29:0,96,1377	0/0:32,0:32:93.23:0,93,1295	0/0:41,0:40:99:0,114,1648	0/0:18,0:18:51.13:0,51,716	0/0:27,0:27:75.22:0,75,1101	0/0:27,0:27:75.25:0,75,1139	0/0:26,0:26:75.24:0,75,1125	1/1:9,6:16:26.60:287,27,0	0/0:40,0:40:99:0,114,1637	1/1:6,9:15:7.49:125,7,0	1/1:3,10:13:24.08:447,24,0	0/0:37,0:37:99:0,105,1520	0/0:23,0:22:56.76:0,57,847	0/0:76,0:76:99:0,223,3148	0/0:24,0:24:72.24:0,72,1101	0/0:20,0:20:51.12:0,51,715	0/0:50,0:50:99:0,147,2203	1/1:12,4:16:22.16:262,22,0	0/0:28,0:28:66.12:0,66,935	0/0:29,0:29:66.22:0,66,1004	0/0:20,0:20:48.16:0,48,733
chr10	4657745	.	T	TGTGCGGCTCA	20583.19	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-4.593;DP=631;FS=0.715;HRun=0;HaplotypeScore=185.4367;InbreedingCoeff=0.9937;MQ=77.31;MQ0=0;MQRankSum=-17.204;QD=110.66;ReadPosRankSum=-0.723;VQSLOD=4.6609;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:18,24:46:96.28:4322,96,0	0/0:10,0:10:30.09:0,30,870	0/0:19,0:19:54.18:0,54,1487	0/0:14,0:15:32.82:0,33,1273	0/0:12,0:12:33.10:0,33,975	0/0:13,0:12:36.12:0,36,1152	0/0:35,0:35:96.32:0,96,3020	0/0:16,0:16:42.10:0,42,1216	0/0:26,0:26:78.27:0,78,2597	0/0:18,0:18:54.18:0,54,1706	0/0:9,0:9:27.09:0,27,816	0/0:49,0:49:99:0,144,4584	0/0:18,0:18:54.19:0,54,1687	0/0:33,0:33:99:0,99,3172	1/1:12,12:30:66.23:3101,66,0	0/0:21,0:21:57.20:0,57,1657	1/1:4,13:18:48.16:2344,48,0	1/1:14,13:27:63.22:3139,63,0	0/0:21,0:21:60.15:0,60,1621	0/0:11,0:11:33.10:0,33,849	0/0:63,0:63:99:0,175,5477	0/0:14,0:14:42.14:0,42,1315	0/0:11,0:11:30.09:0,30,925	0/0:31,0:31:84.29:0,84,2757	1/1:5,5:10:21.07:1079,21,0	1/1:8,11:20:54.17:2444,54,0	1/1:9,15:29:75.03:3544,75,0	1/1:4,1:6:12.04:611,12,0
chr10	4658246	.	AGCTGTGTCAGAGG	A	4712.80	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=10.304;DP=698;FS=0.000;HRun=0;HaplotypeScore=251.3366;InbreedingCoeff=0.9991;MQ=88.28;MQ0=0;MQRankSum=-10.114;QD=76.01;ReadPosRankSum=1.406;VQSLOD=4.1677;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,138,8375	0/0:10,0:10:30.10:0,30,1859	0/0:27,0:28:81.26:0,81,4140	0/0:24,0:24:58.57:0,59,3448	0/0:18,0:18:51.18:0,51,3220	0/0:13,0:13:39.13:0,39,2533	0/0:39,0:39:99:0,117,7246	0/0:23,0:23:63.22:0,63,3401	0/0:18,0:18:54.19:0,54,3320	0/0:30,0:30:90.31:0,90,5596	0/0:10,0:10:27.09:0,27,1535	0/0:43,0:43:99:0,129,8117	0/0:20,0:20:57.20:0,57,3655	0/0:27,0:27:75.26:0,75,4753	1/1:3,19:22:48.16:1821,48,0	0/0:23,0:23:69.23:0,69,4291	0/0:42,0:42:99:0,123,7634	1/1:7,16:23:39.13:1459,39,0	0/0:15,0:15:42.14:0,42,2622	0/0:15,0:15:45.15:0,45,2911	0/0:67,0:67:99:0,202,11844	0/0:16,0:16:45.15:0,45,2712	0/0:13,0:13:30.10:0,30,1956	0/0:35,0:35:99:0,105,6239	1/1:0,17:17:36.12:1433,36,0	0/0:27,0:27:81.28:0,81,5154	0/0:15,0:15:42.14:0,42,2590	0/0:15,0:15:45.14:0,45,2581
chr10	4658561	.	GT	G	1021.01	PASS	AB=0.625;AC=15;AF=0.268;AN=56;BaseQRankSum=3.731;DP=420;FS=38.337;HRun=2;HaplotypeScore=46.7797;InbreedingCoeff=0.8308;MQ=54.88;MQ0=65;MQRankSum=-1.580;QD=10.64;ReadPosRankSum=1.328;VQSLOD=-0.4072;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,16:12:11.63:152,12,0	0/0:7,0:7:15.05:0,15,204	0/0:34,0:10:21.95:0,22,309	0/0:34,0:18:48.02:0,48,610	0/0:8,0:7:17.65:0,18,209	0/0:13,0:12:34.81:0,35,374	0/0:24,1:21:60.98:0,61,734	0/0:13,0:11:33.11:0,33,426	0/0:11,0:11:33.03:0,33,406	0/0:18,0:16:48.14:0,48,602	0/0:8,0:8:18.05:0,18,239	0/0:18,0:17:42.13:0,42,547	0/0:10,0:8:14.64:0,15,169	0/0:8,0:8:23.75:0,24,286	1/1:1,5:2:6.02:76,6,0	0/0:9,0:6:18.05:0,18,224	1/1:3,13:13:18.06:229,18,0	1/1:5,16:11:24.08:305,24,0	0/0:16,0:13:36.12:0,36,471	0/0:8,1:8:12.04:0,12,159	0/0:34,0:27:57.14:0,57,744	0/0:12,0:10:24.55:0,25,319	0/0:8,0:8:17.56:0,18,187	0/0:27,0:26:73.64:0,74,868	1/1:1,6:5:9.03:114,9,0	0/1:4,6:4:32.89:102,0,33	1/1:2,4:4:8.82:114,9,0	1/1:3,3:3:9.03:114,9,0
chr10	4658784	.	CT	C	6272.46	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=11.404;DP=613;FS=3.398;HRun=5;HaplotypeScore=63.8071;InbreedingCoeff=0.9593;MQ=68.84;MQ0=1;MQRankSum=-1.097;QD=29.31;ReadPosRankSum=1.739;VQSLOD=5.4612;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,29:31:78.22:884,78,0	0/0:6,0:6:18.06:0,18,242	0/0:12,0:8:1.05:0,1,126	0/0:17,0:12:23.34:0,23,254	0/0:25,0:25:75.22:0,75,990	0/0:13,0:13:39.13:0,39,533	0/0:25,0:25:72.19:0,72,921	0/0:37,0:37:99:0,102,1365	0/0:8,0:8:21.05:0,21,263	0/0:12,0:12:33.10:0,33,438	0/0:12,0:12:36.10:0,36,461	0/0:28,0:28:75.25:0,75,1025	0/0:19,0:19:57.18:0,57,763	0/0:25,0:25:66:0,66,887	1/1:2,25:27:60.17:681,60,0	0/0:28,0:28:81.27:0,81,1108	1/1:1,44:44:99:1361,120,0	1/1:4,22:26:68.99:771,69,0	0/0:15,0:15:45.12:0,45,569	0/0:19,0:19:48.16:0,48,657	0/0:23,0:23:63.21:0,63,861	0/0:20,0:20:60.16:0,60,769	0/0:21,0:20:60.19:0,60,803	0/0:33,1:34:65.30:0,65,1279	1/1:2,29:31:84.24:952,84,0	1/1:0,24:24:72.19:807,72,0	1/1:1,21:22:48.14:544,48,0	1/1:0,8:8:24.07:272,24,0
chr10	4661125	.	T	TC	7724.26	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=17.076;DP=705;FS=0.990;HRun=4;HaplotypeScore=95.3113;InbreedingCoeff=0.9973;MQ=86.47;MQ0=0;MQRankSum=-1.135;QD=36.96;ReadPosRankSum=5.293;VQSLOD=3.9622;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,51:53:99:1923,141,0	0/0:6,0:6:15.04:0,15,170	0/0:24,0:24:63.10:0,63,668	0/0:24,0:24:52.59:0,53,589	0/0:21,0:21:60.11:0,60,650	0/0:19,0:19:54.14:0,54,601	0/0:32,0:32:84.21:0,84,935	0/0:22,0:22:54.14:0,54,605	0/0:42,0:42:99:0,117,1301	0/0:20,0:20:57.14:0,57,620	0/0:12,0:12:36.09:0,36,400	0/0:29,0:29:81.20:0,81,906	0/0:17,0:17:48.14:0,48,544	0/0:30,0:30:87.23:0,87,977	1/1:3,21:24:57.15:758,57,0	0/0:27,0:27:78.21:0,78,877	1/1:1,20:22:63.21:857,63,0	1/1:1,23:24:66.22:901,66,0	0/0:17,0:17:48.13:0,48,536	0/0:19,0:19:54.15:0,54,612	0/0:69,0:69:99:0,202,2277	0/0:27,0:27:72.20:0,72,809	0/0:20,0:20:60.08:0,60,637	0/0:19,0:19:57.16:0,57,647	1/1:1,19:20:51.17:697,51,0	1/1:0,26:26:78.23:1033,78,0	1/1:0,21:21:63.21:859,63,0	1/1:0,19:19:51.17:696,51,0
chr10	4661663	.	CTT	C	8887.78	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=15.231;DP=741;FS=3.060;HRun=2;HaplotypeScore=93.5018;InbreedingCoeff=0.9981;MQ=82.83;MQ0=0;MQRankSum=-5.296;QD=44.89;ReadPosRankSum=4.414;VQSLOD=4.8625;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,47:47:99:1847,114,0	0/0:12,0:12:36.10:0,36,692	0/0:24,0:24:72.16:0,72,1281	0/0:22,0:22:66.17:0,66,1210	0/0:26,0:26:75.23:0,75,1450	0/0:24,0:24:72.25:0,72,1430	0/0:40,0:40:99:0,120,2262	0/0:29,0:29:87.29:0,87,1696	0/0:36,0:36:99:0,108,2139	0/0:23,0:23:69.22:0,69,1289	0/0:14,0:14:42.14:0,42,852	0/0:32,0:32:96.30:0,96,1820	0/0:29,0:29:87.29:0,87,1701	0/0:26,0:26:78.24:0,78,1493	1/1:0,33:33:96.33:1544,96,0	0/0:28,0:28:84.25:0,84,1600	1/1:0,35:35:99:1596,99,0	1/1:0,10:10:27.09:439,27,0	0/0:21,0:21:63.20:0,63,1214	0/0:23,0:23:69.24:0,69,1375	0/0:70,0:70:99:0,211,4059	0/0:18,0:18:51.17:0,51,1010	0/0:8,0:8:24.08:0,24,487	0/0:38,0:38:99:0,114,2207	1/1:0,19:19:54.18:879,54,0	1/1:0,20:20:60.20:976,60,0	1/1:0,28:28:81.28:1313,81,0	1/1:0,6:6:18.06:293,18,0
chr10	4661750	.	TAGACAG	T	2929.61	PASS	AB=0.579;AC=15;AF=0.268;AN=56;BaseQRankSum=12.886;DP=608;FS=1.541;HRun=0;HaplotypeScore=158.7489;InbreedingCoeff=0.8780;MQ=85.18;MQ0=0;MQRankSum=-11.766;QD=27.90;ReadPosRankSum=-0.101;VQSLOD=3.5150;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,13:25:28.81:355,29,0	0/0:12,0:12:36.12:0,36,1316	0/0:18,0:18:48.16:0,48,1584	0/0:27,0:27:74.22:0,74,2053	0/0:22,0:22:62.95:0,63,2323	0/0:27,0:27:75.26:0,75,2762	0/0:36,0:36:99:0,108,3861	0/0:23,0:23:69.24:0,69,2386	0/0:31,0:31:93.31:0,93,3259	0/0:26,0:26:78.27:0,78,2776	0/0:9,0:9:27.09:0,27,907	0/0:36,0:36:99:0,108,3697	0/0:26,0:26:78.25:0,78,2666	0/0:23,0:23:66.20:0,66,2198	1/1:1,10:11:26.27:423,26,0	0/0:26,0:26:78.27:0,78,2934	1/1:1,9:10:21.01:317,21,0	1/1:0,9:9:24.07:452,24,0	0/0:14,0:14:39.12:0,39,1380	0/0:12,0:12:36.11:0,36,1253	0/0:88,0:88:99:0,259,9201	0/0:11,0:11:33.10:0,33,1105	0/0:12,0:12:36.11:0,36,1155	0/0:24,0:24:69.24:0,69,2596	1/1:2,9:11:18.06:288,18,0	0/1:3,8:11:80.13:404,0,80	1/1:5,17:23:49.34:702,49,0	1/1:1,4:5:3.93:183,4,0
chr10	4661758	.	GCAGAT	G	2538.91	PASS	AB=0.529;AC=15;AF=0.268;AN=56;BaseQRankSum=12.581;DP=571;FS=13.721;HRun=0;HaplotypeScore=136.4561;InbreedingCoeff=0.8942;MQ=84.24;MQ0=1;MQRankSum=-12.187;QD=29.87;ReadPosRankSum=1.114;VQSLOD=2.5102;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,13:14:17.02:251,17,0	0/0:14,0:14:42.14:0,42,1356	0/0:14,0:14:39.13:0,39,1292	0/0:26,0:26:72.46:0,72,2042	0/0:22,0:22:63.22:0,63,2010	0/0:28,0:28:78.25:0,78,2456	0/0:35,0:35:99:0,105,3356	0/0:27,0:27:81.27:0,81,2427	0/0:27,0:27:81.28:0,81,2663	0/0:27,0:27:78.26:0,78,2417	0/0:8,0:8:24.08:0,24,772	0/0:32,0:32:96.33:0,96,3108	0/0:24,0:24:72.23:0,72,2192	0/0:21,0:21:60.21:0,60,1868	1/1:0,10:10:27.05:403,27,0	0/0:28,0:28:84.29:0,84,2633	1/1:2,9:11:26.97:346,27,0	1/1:0,9:9:24.08:415,24,0	0/0:15,0:15:45.15:0,45,1457	0/0:12,0:12:36.12:0,36,1104	0/0:83,0:82:99:0,241,7632	0/0:10,0:10:30.08:0,30,835	0/0:8,0:8:24.08:0,24,765	0/0:25,0:25:75.26:0,75,2309	1/1:1,9:10:20.99:279,21,0	0/1:1,8:9:73.87:298,0,74	1/1:1,17:18:41.42:592,41,0	1/1:0,4:4:9.03:151,9,0
chr10	4661988	.	G	GA	5377.99	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=-12.034;DP=473;FS=4.570;HRun=6;HaplotypeScore=45.8750;InbreedingCoeff=0.9379;MQ=74.92;MQ0=0;MQRankSum=-2.609;QD=30.73;ReadPosRankSum=1.445;VQSLOD=5.3582;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,21:22:60.11:734,60,0	0/0:6,0:6:12.01:0,12,115	0/0:18,0:18:17.72:0,18,314	0/1:14,0:12:2.19:2,0,103	0/0:30,0:30:75.16:0,75,763	0/0:23,0:23:66.15:0,66,673	0/0:19,0:19:51.10:0,51,513	0/0:15,0:15:39.08:0,39,392	0/0:12,0:12:30.05:0,30,299	0/0:18,0:18:51.12:0,51,520	0/0:21,0:21:51.10:0,51,513	0/0:17,0:17:51.12:0,51,520	0/0:14,0:14:39.09:0,39,397	0/0:9,0:9:24.04:0,24,238	1/1:0,11:11:30.10:377,30,0	0/0:11,0:11:30.07:0,30,306	1/1:1,22:23:57.18:717,57,0	1/1:4,13:17:39.12:491,39,0	0/0:20,0:20:51.08:0,51,507	0/0:23,0:23:63.14:0,63,642	0/0:10,0:10:24.05:0,24,245	0/0:8,0:8:18.04:0,18,183	0/0:11,0:11:27.06:0,27,275	0/0:13,0:13:30.02:0,30,295	1/1:0,27:27:78.25:981,78,0	1/1:2,21:23:63.20:793,63,0	1/1:0,22:22:60.18:755,60,0	1/1:0,15:15:42.13:528,42,0
chr10	4662394	.	A	AG	9467.22	PASS	AB=0.548;AC=15;AF=0.268;AN=56;BaseQRankSum=19.440;DP=778;FS=3.288;HRun=2;HaplotypeScore=100.0421;InbreedingCoeff=0.9086;MQ=90.23;MQ0=0;MQRankSum=-8.621;QD=38.96;ReadPosRankSum=6.492;VQSLOD=4.2650;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,57:58:99:2310,163,0	0/0:8,0:8:24.08:0,24,298	0/0:27,0:27:81.24:0,81,985	0/0:33,0:33:87.23:0,87,1028	0/0:21,0:21:57.18:0,57,706	0/0:29,0:29:84.25:0,84,1026	0/0:34,0:34:99:0,99,1212	0/0:25,0:25:69.20:0,69,836	0/0:30,0:30:90.26:0,90,1091	0/0:36,0:36:99:0,102,1263	0/0:12,0:12:33.08:0,33,397	0/0:30,0:30:87.26:0,87,1066	0/0:29,0:29:81.25:0,81,1003	0/0:26,0:26:66.19:0,66,802	1/1:2,28:30:87.29:1241,87,0	0/0:26,0:26:78.25:0,78,967	1/1:3,34:37:99:1469,102,0	1/1:2,29:31:87.29:1253,87,0	0/0:19,0:19:54.17:0,54,668	0/0:18,0:18:54.17:0,54,668	0/0:43,0:43:99:0,120,1485	0/0:28,0:28:75.23:0,75,930	0/0:20,0:20:54.16:0,54,657	0/0:41,0:41:99:0,120,1488	1/1:3,23:26:66.22:951,66,0	0/1:4,19:23:35.71:733,0,36	1/1:0,17:16:47.99:691,48,0	1/1:1,20:21:57.19:821,57,0
chr10	4662625	.	AG	A	710.77	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.014;DP=729;FS=7.109;HRun=3;HaplotypeScore=135.1157;InbreedingCoeff=0.8496;MQ=81.76;MQ0=0;MQRankSum=1.002;QD=29.62;ReadPosRankSum=-3.334;VQSLOD=1.4448;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:73.94:0,74,1018	0/0:9,0:9:27.08:0,27,372	0/0:23,0:23:69.23:0,69,986	0/0:21,0:21:60.20:0,60,834	0/0:15,0:15:39.11:0,39,541	0/0:18,0:18:48.15:0,48,672	0/0:27,0:27:78.26:0,78,1120	1/1:2,22:24:66.19:805,66,0	0/0:33,0:33:99:0,99,1408	0/0:29,0:29:78.25:0,78,1089	0/0:13,0:13:39.11:0,39,540	0/0:39,0:39:99:0,117,1646	0/0:27,0:27:78.23:0,78,1084	0/0:32,0:32:93.30:0,93,1323	0/0:26,0:26:69.19:0,69,969	0/0:31,0:31:84.28:0,84,1210	0/0:25,0:25:66.22:0,66,948	0/0:24,0:24:66.20:0,66,925	0/0:24,0:24:66.21:0,66,933	0/0:20,0:20:57.19:0,57,821	0/0:107,0:107:99:0,310,4362	0/0:23,0:23:63.21:0,63,887	0/0:12,0:12:36.11:0,36,499	0/0:40,0:40:99:0,120,1708	0/0:17,0:17:39.07:0,39,500	0/0:19,0:19:54.18:0,54,772	0/0:15,0:15:30.10:0,30,425	0/0:1,0:1:3.01:0,3,43
chr10	4662644	.	AGG	A	1071.64	PASS	AB=0.538;AC=15;AF=0.268;AN=56;BaseQRankSum=13.325;DP=609;FS=5.218;HRun=2;HaplotypeScore=126.0816;InbreedingCoeff=0.8701;MQ=83.93;MQ0=0;MQRankSum=-12.790;QD=14.88;ReadPosRankSum=4.390;VQSLOD=1.2562;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,14:14:38.01:225,38,0	0/0:10,0:10:30.10:0,30,610	0/0:20,0:20:57.20:0,57,1145	0/0:19,0:19:57.09:0,57,962	0/0:15,0:15:42.14:0,42,854	0/0:13,0:13:39.13:0,39,793	0/0:24,0:24:72.23:0,72,1420	0/0:21,0:21:60.21:0,60,1220	0/0:35,0:35:99:0,105,2128	0/0:25,0:25:72.24:0,72,1428	0/0:11,0:11:33.11:0,33,647	0/0:46,0:46:99:0,135,2743	0/0:29,0:29:87.30:0,87,1764	0/0:30,0:30:90.31:0,90,1817	1/1:1,11:12:34.85:198,35,0	0/0:24,0:24:72.25:0,72,1453	1/1:1,13:14:35.15:213,35,0	1/1:0,10:10:29.96:255,30,0	0/0:21,0:21:60.16:0,60,1145	0/0:19,0:19:57.20:0,57,1158	0/0:102,0:102:99:0,307,6162	0/0:20,0:20:60.21:0,60,1218	0/0:12,0:12:36.12:0,36,731	0/0:41,0:41:99:0,123,2458	1/1:1,3:4:11.71:77,12,0	0/1:1,6:7:40.88:97,0,41	1/1:3,7:10:26.43:174,26,0	1/1:0,1:1:3:26,3,0
chr10	4662647	.	CTG	C	1108.06	PASS	AB=0.538;AC=15;AF=0.268;AN=56;BaseQRankSum=13.151;DP=614;FS=8.226;HRun=0;HaplotypeScore=126.4244;InbreedingCoeff=0.8701;MQ=86.12;MQ0=0;MQRankSum=-12.783;QD=16.06;ReadPosRankSum=5.291;VQSLOD=3.3468;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,14:14:37.63:236,38,0	0/0:10,0:10:30.10:0,30,609	0/0:24,0:24:69.22:0,69,1327	0/0:19,0:19:44.30:0,44,858	0/0:16,0:16:45.15:0,45,889	0/0:14,0:14:42.13:0,42,817	0/0:24,0:24:72.23:0,72,1422	0/0:21,0:21:63.19:0,63,1181	0/0:35,0:35:99:0,105,2085	0/0:23,0:23:69.23:0,69,1369	0/0:11,0:11:33.10:0,33,634	0/0:48,0:48:99:0,141,2853	0/0:30,0:30:90.28:0,90,1755	0/0:31,0:31:93.32:0,93,1873	1/1:0,11:11:32.28:195,32,0	0/0:24,0:24:72.25:0,72,1452	1/1:0,13:13:32.48:209,32,0	1/1:0,10:10:29.99:266,30,0	0/0:19,0:19:54.19:0,54,1097	0/0:19,0:19:57.20:0,57,1158	0/0:100,0:100:99:0,301,5903	0/0:21,0:21:63.20:0,63,1233	0/0:14,0:14:42.10:0,42,731	0/0:42,0:42:99:0,126,2546	1/1:0,4:4:11.87:86,12,0	0/1:1,6:7:40.60:105,0,41	1/1:0,9:9:23.76:178,24,0	1/1:0,1:1:3:27,3,0
chr10	4662656	.	G	GCCTCA	4307.88	PASS	AB=0.571;AC=15;AF=0.268;AN=56;BaseQRankSum=13.154;DP=614;FS=5.352;HRun=0;HaplotypeScore=159.0727;InbreedingCoeff=0.8676;MQ=84.31;MQ0=0;MQRankSum=-12.622;QD=52.54;ReadPosRankSum=5.214;VQSLOD=4.6025;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,14:18:20.28:780,20,0	0/0:11,0:11:33.11:0,33,739	0/0:21,0:21:60.19:0,60,1226	0/0:19,0:19:44.62:0,45,847	0/0:14,0:14:39.12:0,39,855	0/0:13,0:13:39.13:0,39,908	0/0:30,0:30:87.24:0,87,1786	0/0:25,0:25:66.16:0,66,1353	0/0:31,0:31:93.31:0,93,2091	0/0:22,0:22:66.23:0,66,1513	0/0:10,0:10:30.06:0,30,604	0/0:44,0:44:99:0,126,2894	0/0:28,0:28:84.27:0,84,1911	0/0:34,0:34:99:0,102,2318	1/1:1,11:12:17.37:691,17,0	0/0:24,0:24:72.25:0,72,1655	1/1:3,13:16:39.11:811,39,0	1/1:2,10:12:26.38:749,26,0	0/0:20,0:20:54.14:0,54,1134	0/0:20,0:20:60.15:0,60,1146	0/0:90,0:90:99:0,250,5319	0/0:20,0:20:54.18:0,54,1213	0/0:12,0:12:33.10:0,33,704	0/0:44,0:44:99:0,132,2927	1/1:2,3:5:12.04:273,12,0	0/1:2,6:8:48.85:382,0,49	1/1:2,7:9:24.08:546,24,0	1/1:1,1:2:3.01:76,3,0
chr10	4662657	.	G	GC	1830.22	PASS	AB=0.684;AC=15;AF=0.268;AN=56;BaseQRankSum=14.408;DP=647;FS=0.844;HRun=1;HaplotypeScore=137.9088;InbreedingCoeff=0.9180;MQ=83.50;MQ0=0;MQRankSum=-13.779;QD=15.64;ReadPosRankSum=1.319;VQSLOD=3.8040;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,14:26:56.42:401,56,0	0/0:11,0:11:33.11:0,33,428	0/0:23,0:23:57.15:0,57,686	0/0:19,0:19:45.14:0,45,549	0/0:14,0:14:39.11:0,39,492	0/0:13,0:13:39.13:0,39,506	0/0:29,0:29:78.24:0,78,998	0/0:25,0:25:72.16:0,72,866	0/0:31,0:31:90.29:0,90,1168	0/0:23,0:23:66.21:0,66,857	0/0:10,0:10:24.08:0,24,310	0/0:44,0:44:99:0,129,1659	0/0:29,0:29:84.26:0,84,1074	0/0:34,0:34:99:0,102,1307	1/1:7,11:18:47.55:343,48,0	0/0:24,0:24:72.23:0,72,934	1/1:7,13:20:44.66:333,45,0	1/1:7,10:17:26.86:356,27,0	0/0:19,0:19:51.10:0,51,638	0/0:19,0:19:48.16:0,48,622	0/0:87,0:87:99:0,238,3014	0/0:20,0:20:57.16:0,57,711	0/0:12,0:12:33.09:0,33,412	0/0:44,0:44:99:0,129,1672	1/1:5,3:8:11.37:99,11,0	0/1:7,6:13:4.03:191,0,4	1/1:5,7:12:32.65:228,33,0	1/1:2,1:3:8.99:75,9,0
chr10	4664666	.	AT	A	1180.85	PASS	AB=0.679;AC=13;AF=0.232;AN=56;BaseQRankSum=-0.216;DP=564;FS=0.000;HRun=14;HaplotypeScore=79.6638;InbreedingCoeff=0.6593;MQ=67.98;MQ0=8;MQRankSum=1.420;QD=7.57;ReadPosRankSum=1.878;VQSLOD=2.8757;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:40:78.08:0,78,474	0/1:3,8:11:4.25:110,0,4	0/0:13,1:11:8.94:0,9,68	0/0:12,0:12:8.12:0,8,35	0/1:9,16:26:16.89:227,0,17	0/0:19,1:18:42.04:0,42,390	0/0:27,0:26:60.01:0,60,544	1/1:13,14:29:42.59:279,43,0	0/0:21,0:19:26.85:0,27,220	0/0:24,2:26:23.10:0,23,481	0/0:15,1:17:18.30:0,18,300	1/1:4,13:18:14.90:162,15,0	1/1:3,14:17:32.63:222,33,0	1/1:2,13:16:31.67:204,32,0	0/0:16,1:18:15.25:0,15,264	0/0:16,1:18:15.34:0,15,267	0/0:15,0:16:10.64:0,11,47	0/0:16,0:17:35.84:0,36,308	0/0:19,1:23:53.55:0,54,433	0/0:18,0:18:31.29:0,31,314	1/1:4,10:14:3.55:141,4,0	0/0:17,2:19:24.16:0,24,326	0/1:20,4:24:10.79:11,0,318	0/0:14,0:16:29.66:0,30,242	0/0:16,2:18:11.26:0,11,324	0/0:8,0:22:56.32:0,56,334	0/0:14,0:30:50.30:0,50,292	0/0:4,0:11:17.05:0,17,88
chr10	4665048	.	A	AAC	1302.17	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-6.439;DP=908;FS=0.668;HRun=0;HaplotypeScore=122.5135;InbreedingCoeff=0.9957;MQ=68.99;MQ0=1;MQRankSum=1.049;QD=31.76;ReadPosRankSum=-5.736;VQSLOD=3.7301;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:34:59.33:0,59,742	0/0:11,0:11:33.07:0,33,392	0/0:47,0:39:47.51:0,48,626	0/0:41,0:35:67.29:0,67,838	0/0:34,0:34:75.24:0,75,930	0/0:27,0:27:78.22:0,78,953	0/0:40,0:40:90.26:0,90,1098	1/1:13,28:41:87.30:1397,87,0	0/0:34,0:34:81.09:0,81,980	0/0:41,0:41:99:0,105,1279	0/0:25,0:26:57.01:0,57,683	0/0:28,0:28:75.24:0,75,929	0/0:33,0:33:90.25:0,90,1087	0/0:34,0:34:90.27:0,90,1103	0/0:43,0:43:99:0,117,1449	0/0:32,0:32:81.25:0,81,1004	0/0:25,0:25:57.18:0,57,706	0/0:20,0:20:45.96:0,46,625	0/0:10,0:10:21.07:0,21,260	0/0:26,0:26:63.20:0,63,781	0/0:67,0:67:99:0,168,2043	0/0:22,0:23:54:0,54,645	0/0:22,0:22:54.17:0,54,668	0/0:34,0:34:93.23:0,93,1122	0/0:32,0:32:84.20:0,84,1010	0/0:38,0:38:99:0,102,1254	0/0:42,0:40:99:0,123,1522	0/0:23,0:23:42.13:0,42,521
chr10	4665949	.	G	GA	971.57	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-7.349;DP=693;FS=0.000;HRun=4;HaplotypeScore=69.5416;InbreedingCoeff=0.9760;MQ=83.54;MQ0=0;MQRankSum=-0.887;QD=31.34;ReadPosRankSum=-4.066;VQSLOD=2.0707;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,129,1451	0/0:16,0:16:45.09:0,45,488	0/0:21,0:21:47.29:0,47,553	0/0:19,0:19:13.15:0,13,329	0/0:24,0:24:69.16:0,69,760	0/0:28,0:28:78.21:0,78,875	0/0:31,0:31:87.19:0,87,948	1/1:5,26:31:78.26:1066,78,0	0/0:16,0:16:48.06:0,48,518	0/0:30,0:30:84.07:0,84,932	0/0:17,0:17:48.13:0,48,536	0/0:31,0:31:90.25:0,90,1013	0/0:28,0:28:78.21:0,78,876	0/0:31,0:31:93.20:0,93,1019	0/0:19,0:19:54.14:0,54,603	0/0:23,0:23:69.17:0,69,765	0/0:24,0:24:69.17:0,69,770	0/0:31,0:31:90.22:0,90,1006	0/0:25,0:25:69.15:0,69,755	0/0:20,0:20:54.12:0,54,599	0/0:27,0:27:81.22:0,81,908	0/0:20,0:20:60.15:0,60,663	0/0:20,0:20:54.15:0,54,611	0/0:33,0:33:96.26:0,96,1078	0/0:22,0:22:60.16:0,60,672	0/0:32,0:32:93.26:0,93,1054	0/0:19,0:19:57.13:0,57,625	0/0:10,0:10:30.09:0,30,339
chr10	4667059	.	GCA	G	1517.19	PASS	AB=0.904;AC=12;AF=0.214;AN=56;BaseQRankSum=9.542;DP=842;FS=5.541;HRun=0;HaplotypeScore=117.2649;InbreedingCoeff=0.3172;MQ=62.22;MQ0=11;MQRankSum=-2.478;QD=5.20;ReadPosRankSum=1.362;VQSLOD=2.8804;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:35:67.92:0,68,1010	0/0:12,0:12:33.10:0,33,497	0/0:29,0:13:10.29:0,10,61	0/0:42,0:24:30.62:0,31,299	0/0:25,0:25:15.39:0,15,723	0/1:26,3:29:6.52:7,0,826	0/1:31,9:40:71.68:72,0,849	0/0:41,1:41:10.43:0,10,971	0/1:29,4:34:5.56:6,0,1032	0/0:28,0:28:75.21:0,75,1103	0/0:16,1:17:33.11:0,33,512	0/0:33,2:35:47.19:0,47,1211	0/0:35,1:36:36.29:0,36,1205	0/0:29,2:30:38.83:0,39,1108	0/0:22,1:23:11.78:0,12,613	0/1:25,1:26:45.76:46,0,682	0/0:37,0:37:6.87:0,7,880	0/0:33,2:36:1.04:0,1,1074	0/0:21,0:18:36.09:0,36,536	0/0:13,2:15:5.70:0,6,554	0/1:81,6:86:99:180,0,2124	0/0:28,0:28:68.72:0,69,1058	0/0:9,0:9:24.06:0,24,331	0/0:47,1:48:74.86:0,75,1640	0/1:24,2:26:21.61:22,0,630	1/1:13,18:30:58.59:806,59,0	1/1:7,4:11:21.06:251,21,0	1/1:0,7:8:24.07:291,24,0
chr10	4667130	.	C	CAT	14736.28	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-10.441;DP=1107;FS=4.188;HRun=0;HaplotypeScore=156.5852;InbreedingCoeff=0.9997;MQ=60.27;MQ0=7;MQRankSum=2.509;QD=46.49;ReadPosRankSum=0.385;VQSLOD=4.9133;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,40:43:89.33:1676,89,0	0/0:14,0:14:36.12:0,36,541	0/0:47,0:22:41.83:0,42,761	0/0:58,0:33:87.04:0,87,1092	0/0:34,0:34:99:0,102,1505	0/0:32,0:32:90.29:0,90,1352	0/0:28,0:28:72.24:0,72,1082	1/1:2,36:39:99:1933,111,0	0/0:55,0:55:99:0,153,2231	0/0:42,0:42:99:0,123,1808	0/0:20,0:20:54.58:0,55,760	0/0:42,1:43:99:0,126,1868	0/0:47,0:47:99:0,138,2040	0/0:40,0:40:99:0,117,1716	1/1:2,45:48:99:2594,138,0	0/0:46,0:46:99:0,132,1922	1/1:3,36:39:87.15:1672,87,0	1/1:11,16:27:29.15:1090,29,0	0/0:21,0:21:60.12:0,60,832	0/0:39,0:39:99:0,114,1717	0/0:109,1:109:99:0,275,4433	0/0:33,0:33:93.30:0,93,1397	0/0:21,0:21:63.19:0,63,937	0/0:57,0:57:99:0,144,2199	1/1:4,22:26:75.23:1376,75,0	1/1:7,51:59:99:2926,126,0	1/1:1,21:22:51.17:984,51,0	1/1:2,12:14:27.07:485,27,0
chr10	4667195	.	GCA	G	2650	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=10.631;DP=1178;FS=0.925;HRun=0;HaplotypeScore=170.4652;InbreedingCoeff=0.9989;MQ=57.70;MQ0=8;MQRankSum=3.844;QD=28.80;ReadPosRankSum=0.433;VQSLOD=4.8867;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:53:99:0,119,1932	0/0:13,0:13:39.13:0,39,669	0/0:53,0:36:50.50:0,51,1132	0/0:69,0:39:94.67:0,95,1618	0/0:31,0:31:78.27:0,78,1320	0/0:23,0:23:63.20:0,63,1053	0/0:29,0:29:81.17:0,81,1345	0/0:58,0:58:99:0,150,2422	0/0:50,0:50:99:0,141,2330	0/0:50,0:50:99:0,135,2284	0/0:30,0:30:84.29:0,84,1418	0/0:56,0:56:99:0,144,2405	0/0:56,0:56:99:0,157,2637	0/0:39,0:39:99:0,108,1788	1/1:14,26:40:93.28:1205,93,0	0/0:47,0:47:99:0,126,2129	0/0:41,0:40:99:0,102,1691	1/1:5,26:31:65.06:893,65,0	0/0:29,0:28:66.23:0,66,1126	0/0:35,0:35:93.29:0,93,1536	0/0:118,0:118:99:0,313,5313	0/0:25,0:25:60.20:0,60,992	0/0:29,0:29:63.22:0,63,1065	0/0:71,0:70:99:0,171,2925	1/1:5,16:21:54.16:695,54,0	0/0:46,0:46:99:0,132,2167	0/0:17,0:17:27.07:0,27,427	0/0:18,0:18:24.08:0,24,411
chr10	4667266	.	CACAT	C	3799.11	PASS	AB=0.765;AC=6;AF=0.107;AN=56;BaseQRankSum=10.235;DP=1192;FS=3.487;HRun=0;HaplotypeScore=228.7748;InbreedingCoeff=0.5700;MQ=59.59;MQ0=7;MQRankSum=-1.822;QD=30.39;ReadPosRankSum=1.212;VQSLOD=3.1290;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:85.46:0,85,1541	0/0:14,0:14:36.08:0,36,821	0/0:56,0:44:81.70:0,82,1756	0/0:57,0:40:99:0,100,2014	0/0:29,0:29:84.22:0,84,1833	0/0:23,0:23:69.22:0,69,1627	0/0:31,0:31:78.24:0,78,1741	0/0:48,0:48:93.37:0,93,2406	0/0:60,0:60:99:0,166,3849	0/0:41,0:41:99:0,111,2703	0/0:30,0:30:84.27:0,84,2062	0/0:52,0:52:99:0,123,2768	0/0:54,0:54:99:0,150,3426	0/0:51,0:51:99:0,141,3421	0/0:55,0:55:94.70:0,95,2313	0/0:52,0:52:99:0,147,3566	0/0:41,0:40:5.67:0,6,1318	0/1:29,0:29:15.72:16,0,915	0/0:32,0:31:84.23:0,84,1709	0/0:40,0:40:99:0,108,2545	0/0:114,0:113:99:0,253,6333	0/0:26,0:26:75.05:0,75,1810	0/0:34,0:34:96.30:0,96,2236	0/0:51,0:51:99:0,120,2630	0/0:29,0:29:4.35:0,4,1071	0/1:5,40:45:99:1897,0,105	1/1:1,25:26:57.20:1024,57,0	1/1:1,24:25:48.16:862,48,0
chr10	4669026	.	GGT	G	901.39	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=7.399;DP=404;FS=9.852;HRun=0;HaplotypeScore=60.1419;InbreedingCoeff=0.9095;MQ=66.88;MQ0=0;MQRankSum=-0.926;QD=11.41;ReadPosRankSum=2.328;VQSLOD=2.4039;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:40.09:0,40,205	0/0:10,0:10:27.05:0,27,348	0/0:15,0:12:28.32:0,28,390	0/0:15,0:12:32.78:0,33,419	0/0:11,0:11:24.08:0,24,394	0/0:10,0:10:15.05:0,15,250	0/0:21,0:21:32.99:0,33,421	1/1:3,0:3:2.98:21,3,0	0/0:15,0:15:32.94:0,33,438	0/0:14,0:14:27.07:0,27,436	0/0:4,0:4:9.03:0,9,151	0/0:17,0:17:45:0,45,695	0/0:17,0:17:42.13:0,42,665	0/0:28,0:28:63.14:0,63,936	1/1:5,10:15:20.28:247,20,0	0/0:16,0:16:43:0,43,643	1/1:14,0:14:25.02:95,25,0	1/1:3,14:17:36.12:479,36,0	0/0:17,0:17:38.17:0,38,436	0/0:13,0:13:33.08:0,33,472	0/0:41,0:41:92.22:0,92,1307	0/0:15,0:15:36.10:0,36,558	0/0:7,0:7:18.04:0,18,269	0/0:16,0:16:39.01:0,39,600	1/1:1,4:5:12:140,12,0	1/1:10,0:10:14:62,14,0	1/1:8,0:8:2.06:7,2,0	1/1:7,0:7:13.32:42,13,0
chr10	4669033	.	GT	G	1198.68	PASS	AB=0.979;AC=15;AF=0.268;AN=56;BaseQRankSum=8.834;DP=372;FS=5.771;HRun=1;HaplotypeScore=48.2639;InbreedingCoeff=0.6426;MQ=67.40;MQ0=1;MQRankSum=-2.427;QD=12.36;ReadPosRankSum=3.428;VQSLOD=2.3091;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:16:24.38:67,24,0	0/0:9,0:9:27.07:0,27,354	0/0:14,0:11:27.07:0,27,343	0/0:15,1:13:5.55:0,6,364	0/0:11,0:11:27.08:0,27,352	0/0:6,0:6:18.06:0,18,246	0/0:15,0:15:39.05:0,39,479	1/1:2,0:2:2.98:21,3,0	0/0:12,0:12:35.94:0,36,411	0/0:12,0:12:27.09:0,27,372	0/0:4,0:4:9.03:0,9,129	0/0:16,0:16:48:0,48,622	0/0:15,0:15:45.14:0,45,620	0/0:26,0:26:72.13:0,72,899	0/1:14,1:15:29.07:91,0,29	0/0:16,0:16:42.99:0,43,565	1/1:3,10:13:33.98:443,34,0	0/1:18,0:18:15.42:110,0,15	0/0:15,0:15:34.02:0,34,424	0/0:13,0:13:33.07:0,33,409	0/0:39,0:39:86.16:0,86,1258	0/0:15,0:15:39.10:0,39,521	0/0:7,0:7:18.04:0,18,238	0/0:14,0:14:41.97:0,42,530	0/1:6,0:6:20.90:21,0,45	1/1:0,9:9:24.07:303,24,0	1/1:0,9:9:5.85:76,6,0	1/1:0,8:8:18.06:250,18,0
chr10	4669034	.	TG	T	597.66	PASS	AB=1.000;AC=10;AF=0.179;AN=56;BaseQRankSum=6.093;DP=377;FS=4.069;HRun=8;HaplotypeScore=52.5820;InbreedingCoeff=0.6532;MQ=67.30;MQ0=1;MQRankSum=-0.599;QD=8.66;ReadPosRankSum=1.041;VQSLOD=0.8919;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,15:16:42.07:406,42,0	0/0:10,0:10:27.05:0,27,300	0/0:14,0:11:18.52:0,19,209	0/0:15,0:13:18.81:0,19,265	0/0:11,0:11:27.05:0,27,310	0/0:6,0:6:18.06:0,18,217	0/0:15,0:15:33.10:0,33,396	0/0:3,0:3:2.97:0,3,20	0/0:11,0:11:24.07:0,24,289	0/0:14,0:14:24.07:0,24,290	0/0:4,0:4:9.03:0,9,109	0/0:16,0:16:45.12:0,45,530	0/0:15,0:15:45.13:0,45,530	0/0:27,0:27:69.16:0,69,800	0/0:16,0:16:2.40:0,2,92	0/0:16,0:16:39.11:0,39,461	0/1:14,0:14:12.87:128,0,13	0/0:19,0:19:22.64:0,23,142	0/1:12,0:12:7.71:8,0,165	0/0:13,0:13:24.06:0,24,280	0/0:37,0:37:84.09:0,84,950	0/0:16,0:16:33.10:0,33,399	0/0:7,0:7:18.04:0,18,206	0/0:14,0:14:36.10:0,36,421	0/0:8,0:8:17.63:0,18,146	1/1:9,0:9:18.91:92,19,0	1/1:9,0:9:5.27:24,5,0	1/1:8,0:8:17.45:99,17,0
chr10	4669796	.	CAGGGTTCCCGTT	C	1400.66	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.303;DP=762;FS=7.646;HRun=0;HaplotypeScore=252.8990;InbreedingCoeff=0.9979;MQ=84.54;MQ0=0;MQRankSum=-4.635;QD=53.87;ReadPosRankSum=-3.746;VQSLOD=1.5105;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,144,8042	0/0:9,0:9:27.09:0,27,1632	0/0:17,0:17:45.11:0,45,2028	0/0:30,0:30:72.08:0,72,3445	0/0:21,0:21:60.17:0,60,3240	0/0:25,0:25:71.61:0,72,4234	0/0:22,0:22:66.18:0,66,3216	1/1:6,20:25:60:1496,60,0	0/0:31,0:31:87.29:0,87,4998	0/0:31,0:31:84.28:0,84,4414	0/0:14,0:14:42.14:0,42,2510	0/0:30,0:30:90.28:0,90,4785	0/0:31,0:31:93.32:0,93,5568	0/0:32,0:32:96.33:0,96,5645	0/0:33,0:33:90.28:0,90,5100	0/0:34,0:34:99:0,102,5778	0/0:42,0:42:99:0,126,7259	0/0:28,0:28:84.23:0,84,4999	0/0:21,0:21:48.16:0,48,2799	0/0:21,0:21:63.22:0,63,3859	0/0:60,0:60:99:0,175,9991	0/0:24,0:24:66.23:0,66,4058	0/0:22,0:22:57.18:0,57,3245	0/0:26,0:26:69.24:0,69,4107	0/0:34,0:34:96.32:0,96,5397	0/0:18,0:18:51.18:0,51,3061	0/0:21,0:21:60.21:0,60,3672	0/0:10,0:10:27.09:0,27,1660
chr10	4670642	.	GTAGAGAGC	G	3003.02	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.649;DP=610;FS=0.595;HRun=0;HaplotypeScore=165.1918;InbreedingCoeff=0.9981;MQ=88.57;MQ0=0;MQRankSum=-9.580;QD=62.56;ReadPosRankSum=0.537;VQSLOD=3.3202;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,117,5057	0/0:9,0:9:27.09:0,27,1221	0/0:27,0:27:77.03:0,77,2891	0/0:25,0:25:72.23:0,72,2700	0/0:16,0:16:45.15:0,45,2037	0/0:16,0:16:42.14:0,42,1865	0/0:26,0:26:75.23:0,75,2959	0/0:31,0:31:90.28:0,90,3376	0/0:19,0:19:57.20:0,57,2453	0/0:19,0:19:57.15:0,57,2431	0/0:18,0:18:48.16:0,48,2172	0/0:19,0:19:57.18:0,57,2403	0/0:18,0:18:54.15:0,54,2176	0/0:26,0:26:78.25:0,78,3314	1/1:0,20:20:45.15:1265,45,0	0/0:15,0:15:42.14:0,42,1902	0/0:25,0:25:72.25:0,72,3230	1/1:2,6:8:21.02:483,21,0	0/0:25,0:25:75.24:0,75,3062	0/0:12,0:12:36.12:0,36,1505	0/0:59,0:59:99:0,178,7755	0/0:18,0:18:54.19:0,54,2385	0/0:15,0:15:45.14:0,45,1910	0/0:17,0:17:51.14:0,51,2086	1/1:2,18:20:57.19:1398,57,0	0/0:26,0:26:75.25:0,75,3270	0/0:25,0:24:72.25:0,72,3110	0/0:16,0:16:45.12:0,45,1750
chr10	4670720	.	GGAGGAGCA	G	5152.26	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=12.356;DP=649;FS=4.580;HRun=0;HaplotypeScore=178.1336;InbreedingCoeff=0.9995;MQ=88.73;MQ0=0;MQRankSum=-12.729;QD=65.22;ReadPosRankSum=2.713;VQSLOD=4.5948;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,114,4714	0/0:10,0:10:27.09:0,27,1100	0/0:27,0:27:78.18:0,78,2710	0/0:28,0:28:69.24:0,69,2723	0/0:16,0:16:45.14:0,45,1770	0/0:26,0:26:75.26:0,75,3144	0/0:30,0:30:81.26:0,81,3318	0/0:28,0:28:75.25:0,75,3014	0/0:20,0:20:50.76:0,51,2162	0/0:21,0:21:57.20:0,57,2437	0/0:15,0:15:39.13:0,39,1640	0/0:19,0:19:54.19:0,54,2262	0/0:16,0:16:48.16:0,48,2066	0/0:23,0:23:69.24:0,69,2861	1/1:2,12:14:36.12:995,36,0	0/0:22,0:22:63.22:0,63,2704	1/1:4,16:20:42.14:1140,42,0	1/1:2,14:16:33.11:923,33,0	0/0:19,0:19:54.17:0,54,2196	0/0:17,0:17:48.16:0,48,1912	0/0:73,0:73:99:0,193,8048	0/0:23,0:23:60.21:0,60,2494	0/0:17,0:17:45.15:0,45,1878	0/0:29,0:29:84.29:0,84,3589	1/1:4,25:29:75.26:2095,75,0	0/0:25,0:25:63.22:0,63,2677	0/0:11,0:11:33.11:0,33,1452	0/0:14,0:14:39.13:0,39,1674
chr10	4670857	.	ACTCT	A	4531.93	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=11.264;DP=625;FS=3.235;HRun=0;HaplotypeScore=108.0552;InbreedingCoeff=0.9973;MQ=93.33;MQ0=0;MQRankSum=-3.852;QD=40.11;ReadPosRankSum=2.409;VQSLOD=5.0240;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,41:44:90.31:1677,90,0	0/0:8,0:8:21.07:0,21,560	0/0:28,0:27:81.11:0,81,1903	0/0:32,0:32:73.01:0,73,1743	0/0:13,0:13:39.12:0,39,948	0/0:20,0:20:60.19:0,60,1507	0/0:29,0:29:78.24:0,78,1970	0/0:23,0:23:66.20:0,66,1602	0/0:20,0:20:57.20:0,57,1519	0/0:20,0:20:57.17:0,57,1384	0/0:10,0:10:27.09:0,27,705	0/0:31,0:31:90.30:0,90,2308	0/0:17,0:17:51.18:0,51,1346	0/0:22,0:22:63.20:0,63,1622	0/0:22,0:22:57.18:0,57,1431	0/0:23,0:23:66.23:0,66,1760	0/0:31,0:31:87.30:0,87,2266	0/0:20,0:20:54.19:0,54,1396	0/0:16,0:16:36.11:0,36,956	0/0:9,0:9:27.09:0,27,719	0/0:50,0:50:99:0,141,3461	0/0:10,0:10:24.08:0,24,638	0/0:11,0:11:26.70:0,27,717	0/0:29,0:29:81.26:0,81,2068	0/0:18,0:18:45.15:0,45,1199	1/1:2,18:20:54.17:962,54,0	1/1:2,17:19:39.06:722,39,0	1/1:5,25:30:63.22:1171,63,0
chr10	4671251	.	G	GTCCATCCA	5446.27	PASS	AB=0.797;AC=16;AF=0.286;AN=56;BaseQRankSum=3.154;DP=803;FS=14.732;HRun=0;HaplotypeScore=197.9176;InbreedingCoeff=0.8105;MQ=54.36;MQ0=16;MQRankSum=-9.316;QD=22.23;ReadPosRankSum=-1.693;VQSLOD=3.2637;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:42,0:42:80.65:794,81,0	0/0:8,0:8:18.05:0,18,406	0/0:51,0:26:29.04:0,29,349	0/0:38,0:14:6.01:0,6,68	0/0:18,0:18:15.56:0,16,630	0/0:14,0:13:30.10:0,30,756	0/0:29,0:29:48.05:0,48,992	0/1:47,0:47:4.91:477,0,5	0/0:25,0:25:63.17:0,63,1414	0/0:29,0:29:50.81:0,51,1080	0/0:15,0:16:30.62:0,31,637	0/0:43,0:43:87.17:0,87,1727	0/0:33,0:34:66.12:0,66,1430	0/0:28,0:28:54.11:0,54,1116	1/1:12,12:29:14.96:589,15,0	0/0:30,0:30:63.14:0,63,1392	1/1:28,1:30:28.33:587,28,0	1/1:22,3:25:45:1112,45,0	0/0:17,0:16:24.08:0,24,554	0/0:12,0:12:15.03:0,15,262	0/0:73,0:72:99:0,122,2538	0/0:27,0:27:54.10:0,54,1159	0/0:10,0:10:24.03:0,24,492	0/0:54,0:53:99:0,111,2587	1/1:10,18:30:12.04:399,12,0	0/1:7,14:22:36.44:736,0,36	1/1:3,8:13:14.60:483,15,0	1/1:6,1:7:15:269,15,0
chr10	4671427	.	A	ATATCTATC	9659.45	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=9.709;DP=856;FS=2.949;HRun=0;HaplotypeScore=235.9585;InbreedingCoeff=0.9886;MQ=69.47;MQ0=6;MQRankSum=-10.589;QD=38.79;ReadPosRankSum=-1.463;VQSLOD=4.5096;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:39,0:39:72.19:994,72,0	0/0:17,0:17:45.09:0,45,962	0/0:47,0:35:15.47:0,15,627	0/0:40,0:28:11.22:0,11,532	0/0:38,0:38:77.84:0,78,1811	0/0:23,0:23:57.18:0,57,1282	0/0:32,0:32:78.25:0,78,1614	1/1:41,0:37:57.04:889,57,0	0/0:32,0:32:75.26:0,75,1767	0/0:39,0:39:75.25:0,75,1834	0/0:25,0:25:57.20:0,57,1326	0/0:45,0:45:99:0,105,2475	0/0:34,0:34:90.28:0,90,2170	0/0:32,0:32:69.23:0,69,1675	1/1:28,7:36:51.17:1457,51,0	0/0:38,0:38:93.31:0,93,2261	1/1:11,0:11:17.51:180,18,0	1/1:14,3:17:33.05:724,33,0	0/0:26,0:25:54.13:0,54,1034	0/0:26,0:26:66.20:0,66,1482	0/0:35,0:35:87.24:0,87,1825	0/0:36,0:36:49.63:0,50,1839	0/0:15,0:15:30.10:0,30,723	0/0:27,0:27:60.19:0,60,1376	1/1:20,10:30:63.19:1824,63,0	1/1:29,0:29:75.19:1915,75,0	1/1:29,0:30:48.12:1165,48,0	1/1:16,0:16:16.39:510,16,0
chr10	4671447	.	C	CTAT	2087.71	PASS	AB=0.895;AC=9;AF=0.161;AN=56;BaseQRankSum=11.555;DP=879;FS=4.256;HRun=0;HaplotypeScore=182.5437;InbreedingCoeff=-0.1915;MQ=60.19;MQ0=7;MQRankSum=-7.336;QD=7.85;ReadPosRankSum=0.469;VQSLOD=3.0936;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:23,18:41:83.45:587,0,83	0/0:18,0:18:54.12:0,54,932	0/0:37,0:25:62.05:0,62,963	0/0:37,0:24:58.86:0,59,899	0/0:32,0:32:89.63:0,90,1582	0/0:24,0:24:69.23:0,69,1203	0/0:33,0:33:99:0,99,1695	0/1:45,0:41:35.38:35,0,491	0/0:35,0:35:99:0,102,1759	0/0:39,0:39:99:0,117,1920	0/0:24,0:24:69.22:0,69,1214	0/0:44,0:44:99:0,123,2194	0/0:42,0:42:99:0,126,2138	0/0:32,0:32:87.29:0,87,1521	0/1:39,0:39:99:149,0,540	0/0:36,0:36:99:0,105,1881	0/1:15,0:15:42.73:43,0,233	0/1:19,0:19:99:158,0,262	0/0:31,0:30:90.27:0,90,1449	0/0:29,0:29:81.26:0,81,1413	0/0:40,0:40:99:0,111,1836	0/0:35,0:35:84.67:0,85,1707	0/0:13,0:13:39.13:0,39,693	0/0:32,0:32:96.30:0,96,1595	0/1:31,1:32:99:334,0,222	0/1:22,9:31:99:513,0,130	0/1:22,8:30:99:270,0,174	0/1:11,3:14:99:140,0,135
chr10	4672373	.	GCA	G	3521.72	PASS	AB=0.916;AC=21;AF=0.375;AN=56;BaseQRankSum=12.570;DP=883;FS=3.572;HRun=0;HaplotypeScore=122.5307;InbreedingCoeff=0.5139;MQ=61.96;MQ0=19;MQRankSum=-1.786;QD=8.83;ReadPosRankSum=3.246;VQSLOD=3.5222;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:39,1:40:4.92:169,0,5	0/0:14,0:14:27.09:0,27,426	0/0:37,1:13:11.86:0,12,116	0/0:38,0:11:12.02:0,12,157	0/0:27,2:29:26.90:0,27,854	0/0:20,0:20:39.12:0,39,584	0/0:34,3:37:45.99:0,46,1186	0/0:14,0:28:32.35:0,32,299	0/0:28,1:29:60.20:0,60,940	0/1:25,2:27:3.49:3,0,848	0/1:15,3:18:51.85:52,0,644	0/0:33,0:33:66.21:0,66,991	0/1:26,2:28:4.48:4,0,838	0/1:27,6:33:97.22:97,0,890	1/1:6,31:37:62.67:720,63,0	0/0:36,1:38:51.93:0,52,1233	1/1:5,24:31:66.03:756,66,0	1/1:5,21:26:42.12:493,42,0	0/1:22,1:21:14.31:14,0,237	0/0:20,0:20:44.81:0,45,644	0/0:85,7:89:63.30:0,63,2757	0/1:27,3:29:42.87:43,0,870	0/0:21,2:23:12.80:0,13,644	0/0:39,2:43:39.83:0,40,1446	1/1:5,29:34:63.02:721,63,0	1/1:7,0:36:42.92:267,43,0	1/1:6,0:24:19.89:97,20,0	1/1:4,0:9:17.04:84,17,0
chr10	4673412	.	GATTT	G	3488.96	PASS	AB=1.000;AC=19;AF=0.352;AN=54;BaseQRankSum=8.607;DP=282;FS=2.045;HRun=0;HaplotypeScore=44.8632;InbreedingCoeff=0.7730;MQ=59.68;MQ0=2;MQRankSum=-0.125;QD=23.26;ReadPosRankSum=-0.549;VQSLOD=3.1675;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,20:26:51.17:835,51,0	0/0:12,0:12:15.05:0,15,343	0/0:10,0:4:3.01:0,3,69	0/1:3,0:3:0:0,0,0	0/0:17,0:17:33.09:0,33,701	0/0:16,0:16:36.11:0,36,813	0/0:9,0:9:21.04:0,21,416	1/1:13,14:26:42.06:565,42,0	0/0:2,0:2:6:0,6,96	0/0:9,0:8:15.04:0,15,275	0/0:6,0:6:12.03:0,12,244	0/0:4,0:4:2.99:0,3,24	./.	0/0:5,0:5:9.03:0,9,218	1/1:6,4:10:9.03:147,9,0	0/0:4,0:4:9.03:0,9,198	1/1:7,12:19:24.08:393,24,0	1/1:2,15:17:21.07:344,21,0	0/0:19,0:17:30.09:0,30,641	0/0:4,0:4:6.01:0,6,98	0/0:4,0:4:9.02:0,9,172	0/0:3,0:3:6.02:0,6,146	0/0:4,0:4:3.01:0,3,73	0/0:2,0:2:3.01:0,3,73	1/1:5,11:16:15.05:246,15,0	1/1:12,2:14:33.06:408,33,0	1/1:6,2:8:15.03:197,15,0	1/1:6,4:10:26.27:353,26,0
chr10	4674119	.	AAG	A	3113.13	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=12.611;DP=634;FS=6.854;HRun=0;HaplotypeScore=92.1159;InbreedingCoeff=0.9992;MQ=79.18;MQ0=1;MQRankSum=-0.993;QD=28.30;ReadPosRankSum=1.192;VQSLOD=4.8989;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,147,2349	0/0:11,0:11:33.06:0,33,519	0/0:30,0:28:61.02:0,61,775	0/0:18,0:18:32.47:0,32,432	0/0:18,0:18:54.18:0,54,890	0/0:27,0:27:81.26:0,81,1355	0/0:30,0:30:81.24:0,81,1297	1/1:3,18:21:54.11:642,54,0	0/0:30,0:30:87.04:0,87,1366	0/0:19,0:19:42.10:0,42,604	0/0:18,0:18:51.08:0,51,759	0/0:25,0:25:66.18:0,66,1040	0/0:26,0:26:75.20:0,75,1200	0/0:18,0:18:51.12:0,51,789	1/1:0,18:18:45.11:579,45,0	0/0:20,0:20:57.17:0,57,921	1/1:2,27:29:66.22:878,66,0	1/1:4,23:27:63.21:838,63,0	0/0:19,0:19:41.60:0,42,733	0/0:15,0:15:42.08:0,42,649	0/0:23,0:22:63.19:0,63,1048	0/0:17,0:17:51.11:0,51,823	0/0:17,0:17:45.02:0,45,677	0/0:27,0:27:75.24:0,75,1246	1/1:1,14:15:30.01:352,30,0	0/0:28,0:28:75.25:0,75,1229	0/0:28,0:28:75.24:0,75,1249	0/0:8,0:8:24.04:0,24,353
chr10	4674696	.	TACACACACACACACACACACAC	T	901.58	PASS	AC=6;AF=0.111;AN=54;BaseQRankSum=4.471;DP=514;FS=1.669;HRun=0;HaplotypeScore=238.0190;InbreedingCoeff=0.6474;MQ=68.80;MQ0=18;MQRankSum=-2.677;QD=19.60;ReadPosRankSum=-0.366;VQSLOD=2.3883;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:32:12.04:0,12,175	0/0:11,0:12:21.07:0,21,1705	0/0:33,0:24:3.01:0,3,60	./.	0/0:13,0:13:21.54:0,22,1071	0/0:13,0:12:9.03:0,9,471	0/0:16,0:16:14.71:0,15,1096	0/0:23,0:23:24.08:0,24,978	0/0:11,0:11:21.54:0,22,1836	0/0:7,0:7:12.04:0,12,865	0/0:12,0:12:21.07:0,21,1586	0/0:21,0:21:33.11:0,33,2650	0/0:14,0:15:15.05:0,15,1405	0/0:15,0:14:21.07:0,21,1721	0/0:8,0:12:15.05:0,15,625	0/0:20,0:20:5.15:0,5,2286	0/0:19,0:23:16.68:0,17,775	0/0:13,0:19:14.06:0,14,568	0/0:17,0:14:18.76:0,19,862	0/0:9,0:10:18.05:0,18,1054	0/0:39,0:37:76.48:0,76,4690	0/0:15,0:15:24.08:0,24,1852	0/0:18,0:18:18.06:0,18,1368	0/0:27,0:28:39.13:0,39,3273	0/0:7,0:8:6.02:0,6,214	1/1:12,0:15:0.88:150,1,0	1/1:12,16:28:8.64:518,9,0	1/1:0,3:3:6.02:346,6,0
chr10	4675464	.	GATTTT	G	2167.07	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.479;DP=592;FS=19.628;HRun=0;HaplotypeScore=110.4002;InbreedingCoeff=0.9853;MQ=74.01;MQ0=0;MQRankSum=-10.152;QD=44.23;ReadPosRankSum=0.639;VQSLOD=2.4746;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:90.30:0,90,2583	0/0:15,0:15:42.14:0,42,1272	0/0:22,0:21:50.70:0,51,1332	0/0:7,0:7:12.04:0,12,345	0/0:23,0:23:63.21:0,63,1844	0/0:26,0:26:66.21:0,66,1873	0/0:18,0:18:51.18:0,51,1480	0/0:39,0:39:96.31:0,96,2691	0/0:20,0:20:57.18:0,57,1617	0/0:30,0:30:78.26:0,78,2291	0/0:20,0:20:60.21:0,60,1795	0/0:18,0:18:36.12:0,36,1092	0/0:21,0:21:57.20:0,57,1641	0/0:28,0:28:75.26:0,75,2241	1/1:1,11:12:30.10:609,30,0	0/0:21,0:21:48.16:0,48,1432	0/0:29,0:29:72.23:0,72,2086	1/1:3,11:14:24.08:487,24,0	0/0:19,0:19:45.15:0,45,1323	0/0:24,0:24:72.25:0,72,2159	0/0:19,0:19:57.19:0,57,1620	0/0:16,0:16:48.16:0,48,1454	0/0:17,0:17:45.15:0,45,1362	0/0:22,0:22:63.21:0,63,1772	1/1:2,21:23:60.21:1214,60,0	0/0:28,0:28:75.26:0,75,2255	0/0:23,0:21:60.21:0,60,1728	0/0:6,0:6:18.06:0,18,501
chr10	4675608	.	A	AGTGTGT	2061.03	PASS	AB=0.690;AC=15;AF=0.288;AN=52;BaseQRankSum=-0.174;DP=764;FS=9.689;HRun=0;HaplotypeScore=160.2596;InbreedingCoeff=0.8049;MQ=58.18;MQ0=13;MQRankSum=-2.021;QD=9.72;ReadPosRankSum=-0.031;VQSLOD=2.1984;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:31,0:59:11.13:11,0,86	0/0:12,0:12:3.11:0,3,419	./.	./.	0/0:16,0:20:36.11:0,36,629	0/0:28,0:30:51.12:0,51,968	0/0:28,0:31:62.63:0,63,1123	0/0:12,0:23:23.41:0,23,196	0/0:30,0:29:50.88:0,51,959	0/0:24,0:25:30.10:0,30,577	0/0:13,0:13:18.06:0,18,359	0/0:21,0:25:36.99:0,37,673	0/0:15,0:19:33.09:0,33,553	0/0:25,0:29:57.15:0,57,1040	1/1:6,0:13:9.03:116,9,0	0/0:17,0:21:37.01:0,37,717	1/1:18,22:42:29.18:691,29,0	1/1:12,0:25:21.07:271,21,0	0/0:20,0:19:18.53:0,19,346	0/0:18,0:21:39.11:0,39,637	0/0:103,0:104:99:0,145,2987	0/0:24,0:25:36.12:0,36,703	0/0:22,0:25:36.11:0,36,639	0/0:33,0:37:69.21:0,69,1300	1/1:5,0:16:16.45:226,16,0	1/1:10,10:23:36.67:695,37,0	1/1:8,8:17:2.21:96,2,0	1/1:6,5:13:5.19:134,5,0
chr10	4677248	.	ACTCTGTTT	A	1152.19	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.250;DP=746;FS=9.063;HRun=0;HaplotypeScore=182.5316;InbreedingCoeff=0.9997;MQ=79.38;MQ0=0;MQRankSum=-6.575;QD=64.01;ReadPosRankSum=2.316;VQSLOD=2.6866;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,141,5797	0/0:14,0:14:36.12:0,36,1558	0/0:19,0:19:57.20:0,57,2283	0/0:28,0:27:78.15:0,78,3104	0/0:28,0:28:78.27:0,78,3406	0/0:29,0:29:84.27:0,84,3585	0/0:36,0:36:99:0,108,4572	0/0:25,0:25:69.22:0,69,2825	0/0:41,0:41:99:0,123,5287	0/0:31,0:31:87.30:0,87,3715	0/0:12,0:12:36.11:0,36,1428	0/0:27,0:27:81.26:0,81,3312	0/0:24,0:24:69.24:0,69,3056	0/0:33,0:33:96.33:0,96,4234	0/0:23,0:22:69.24:0,69,3060	0/0:20,0:20:60.21:0,60,2552	1/1:2,16:18:45.15:1247,45,0	0/0:19,0:19:54.19:0,54,2350	0/0:17,0:17:48.16:0,48,1841	0/0:24,0:24:66.21:0,66,2739	0/0:48,0:48:99:0,141,5847	0/0:24,0:24:69.22:0,69,2924	0/0:23,0:23:69.24:0,69,2925	0/0:34,0:34:99:0,102,4409	0/0:33,0:33:99:0,99,4304	0/0:27,0:27:81.28:0,81,3412	0/0:26,0:26:78.27:0,78,3334	0/0:14,0:14:42.14:0,42,1862
chr10	4678303	.	GC	G	3924.02	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=14.069;DP=674;FS=1.255;HRun=4;HaplotypeScore=74.6453;InbreedingCoeff=0.9977;MQ=81.60;MQ0=0;MQRankSum=-2.710;QD=30.42;ReadPosRankSum=3.865;VQSLOD=3.9469;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,43:43:99:1296,108,0	0/0:6,0:6:18.06:0,18,252	0/0:26,0:26:39.74:0,40,928	0/0:20,0:20:51.13:0,51,652	0/0:22,0:22:63.21:0,63,880	0/0:15,0:15:42.13:0,42,571	0/0:30,0:30:81.26:0,81,1110	0/0:24,0:24:66.22:0,66,922	0/0:22,0:22:66.20:0,66,887	0/0:23,0:23:66.19:0,66,878	0/0:13,0:13:39.11:0,39,527	0/0:25,0:25:72.21:0,72,956	0/0:16,0:16:48.16:0,48,672	0/0:32,0:32:96.31:0,96,1320	1/1:1,28:29:75.23:900,75,0	0/0:23,0:23:69.22:0,69,944	0/0:31,0:31:84.28:0,84,1170	1/1:0,35:35:87.23:1044,87,0	0/0:24,0:24:69.20:0,69,918	0/0:25,0:25:69.23:0,69,966	0/0:35,0:35:99:0,102,1411	0/0:15,0:15:45.14:0,45,614	0/0:20,0:20:60.20:0,60,839	0/0:28,0:28:81.27:0,81,1131	1/1:1,21:22:57.17:684,57,0	0/0:29,0:29:81.25:0,81,1103	0/0:23,0:23:63.21:0,63,878	0/0:18,0:18:45.15:0,45,630
chr10	4678521	.	A	ACCT	5525.77	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=13.546;DP=709;FS=0.426;HRun=0;HaplotypeScore=105.6897;InbreedingCoeff=0.9952;MQ=83.41;MQ0=0;MQRankSum=-3.292;QD=46.05;ReadPosRankSum=3.883;VQSLOD=6.6301;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,43:45:99:2250,102,0	0/0:11,0:11:33.04:0,33,514	0/0:22,0:22:63.18:0,63,957	0/0:20,0:19:51.16:0,51,794	0/0:33,0:33:90.16:0,90,1305	0/0:21,0:20:54.18:0,54,898	0/0:28,0:28:78.22:0,78,1212	0/0:19,0:19:51.11:0,51,731	0/0:28,0:28:78.25:0,78,1271	0/0:32,0:32:93.30:0,93,1505	0/0:10,0:10:30.06:0,30,446	0/0:28,0:28:78.25:0,78,1273	0/0:19,0:19:54.14:0,54,822	0/0:25,0:25:72.22:0,72,1168	1/1:1,26:28:60.21:1358,60,0	0/0:30,0:30:87.25:0,87,1367	0/0:32,0:32:90.25:0,90,1419	1/1:0,20:20:33.11:747,33,0	0/0:22,0:22:63.18:0,63,995	0/0:14,0:14:42.11:0,42,646	0/0:56,0:56:99:0,153,2291	0/0:18,0:18:45.12:0,45,697	0/0:21,0:21:63.16:0,63,969	0/0:32,0:32:93.30:0,93,1512	1/1:1,24:27:54.12:1170,54,0	0/0:37,0:37:96.29:0,96,1526	0/0:24,0:24:69.20:0,69,1090	0/0:7,0:7:15:0,15,172
chr10	4678756	.	T	TG	4049.37	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-7.176;DP=607;FS=1.917;HRun=2;HaplotypeScore=61.7882;InbreedingCoeff=0.9996;MQ=89.56;MQ0=0;MQRankSum=-3.387;QD=37.49;ReadPosRankSum=2.773;VQSLOD=4.3879;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,41:43:99:1511,105,0	0/0:11,0:11:30.08:0,30,358	0/0:22,0:22:60.06:0,60,672	0/0:24,0:24:46.75:0,47,679	0/0:15,0:15:45.14:0,45,557	0/0:16,0:16:48.15:0,48,595	0/0:26,0:26:72.23:0,72,892	0/0:15,0:15:42.13:0,42,521	0/0:29,0:29:84.25:0,84,1028	0/0:28,0:28:78.21:0,78,935	0/0:15,0:15:42.13:0,42,520	0/0:19,0:19:57.18:0,57,706	0/0:26,0:26:75.21:0,75,904	0/0:24,0:24:66.21:0,66,818	1/1:2,19:21:54.18:777,54,0	0/0:14,0:14:42.13:0,42,520	0/0:41,0:41:99:0,123,1499	1/1:1,25:26:69.23:993,69,0	0/0:18,0:18:51.16:0,51,632	0/0:14,0:14:39.12:0,39,483	0/0:26,0:26:78.23:0,78,954	0/0:25,0:25:69.22:0,69,854	0/0:10,0:10:30.09:0,30,361	0/0:27,0:27:75.24:0,75,929	1/1:0,18:18:54.18:768,54,0	0/0:23,0:23:66.19:0,66,796	0/0:19,0:19:57.18:0,57,704	0/0:12,0:12:36.11:0,36,446
chr10	4680128	.	T	TG	1046.90	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-5.178;DP=302;FS=5.820;HRun=5;HaplotypeScore=34.5021;InbreedingCoeff=0.8896;MQ=79.72;MQ0=0;MQRankSum=-1.997;QD=24.35;ReadPosRankSum=-0.663;VQSLOD=1.7940;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,20:20:42.09:532,42,0	0/0:6,0:6:18.02:0,18,182	0/0:8,0:8:8.64:0,9,151	0/0:7,0:7:11.57:0,12,123	0/0:7,0:7:18.05:0,18,193	0/0:9,0:9:21.05:0,21,226	0/0:16,0:16:45.08:0,45,467	0/0:15,0:15:36.08:0,36,380	0/0:12,0:12:36.09:0,36,387	0/0:10,0:10:18.04:0,18,193	0/0:5,0:5:15.04:0,15,161	0/0:15,0:15:36.09:0,36,386	0/0:13,0:13:36.09:0,36,387	0/0:17,0:17:51.12:0,51,543	1/1:1,5:6:9.03:118,9,0	0/0:9,0:9:21.05:0,21,226	0/0:11,0:11:30.04:0,30,305	1/1:0,9:9:27.09:352,27,0	0/0:10,0:10:23.89:0,24,254	0/0:5,0:5:12.01:0,12,119	0/0:29,0:29:72.16:0,72,765	0/0:6,0:6:15.01:0,15,150	0/0:7,0:7:12.03:0,12,129	0/0:16,0:16:42.10:0,42,451	1/1:2,6:8:15.05:197,15,0	0/0:14,0:14:30.06:0,30,316	0/0:7,0:7:18.03:0,18,185	0/0:5,0:5:5.92:0,6,121
chr10	4685104	.	GA	G	744.64	PASS	AB=0.878;AC=16;AF=0.333;AN=48;BaseQRankSum=8.120;DP=404;FS=0.468;HRun=14;HaplotypeScore=61.5777;InbreedingCoeff=0.3837;MQ=58.61;MQ0=11;MQRankSum=-0.785;QD=4.11;ReadPosRankSum=4.126;VQSLOD=0.4815;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	0/1:7,1:8:5.73:6,0,83	0/0:6,1:3:2.90:0,3,16	0/0:10,2:6:2.58:0,3,35	0/0:17,1:19:20.44:0,20,350	0/0:23,2:27:27.32:0,27,486	0/0:19,2:21:0.78:0,1,275	1/1:5,10:15:30.78:194,31,0	0/1:9,1:12:6.56:7,0,106	0/0:12,0:13:15.41:0,15,158	0/1:13,3:17:2.30:2,0,247	0/0:11,2:13:9.44:0,9,227	0/1:15,3:18:5.15:5,0,231	0/0:12,1:13:9.36:0,9,206	./.	0/1:8,1:8:6.37:6,0,115	1/1:2,27:32:62:407,62,0	./.	0/0:24,1:17:21.30:0,21,328	0/0:28,2:29:46.19:0,46,398	0/1:10,1:10:20.32:20,0,63	0/0:13,2:15:3.43:0,3,168	0/0:13,0:13:21:0,21,185	0/0:12,1:13:6.42:0,6,194	./.	1/1:6,1:20:29.43:97,29,0	1/1:1,0:16:24.43:71,24,0	1/1:4,1:17:27.19:90,27,0
chr10	4685783	.	AAAAC	A	542.46	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=5.009;DP=632;FS=0.000;HRun=0;HaplotypeScore=102.8442;InbreedingCoeff=0.6327;MQ=61.08;MQ0=11;MQRankSum=0.900;QD=15.95;ReadPosRankSum=3.829;VQSLOD=2.7226;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:33:60.92:0,61,492	0/0:9,0:9:23.88:0,24,366	0/0:27,0:14:13.39:0,13,365	0/0:16,0:6:12.87:0,13,130	0/0:31,0:31:83.80:0,84,1251	0/0:16,0:16:28.06:0,28,549	0/0:32,0:32:81.94:0,82,1096	0/0:32,0:28:67.82:0,68,1011	0/0:19,0:19:48.12:0,48,806	0/0:28,0:28:70.36:0,70,1021	0/0:16,0:16:41.95:0,42,536	0/0:23,0:23:58.48:0,58,791	0/0:29,0:28:69.08:0,69,860	0/0:12,0:12:27.47:0,27,384	0/0:25,0:24:48.07:0,48,675	0/0:30,0:30:83.97:0,84,1083	1/1:16,10:26:55.68:633,56,0	0/0:20,0:18:38.81:0,39,453	0/0:14,0:13:36.06:0,36,564	0/0:16,0:16:26.96:0,27,674	0/0:16,0:16:33.52:0,34,525	0/0:17,0:17:44.90:0,45,551	0/0:21,0:20:56.19:0,56,840	0/0:33,0:33:77.56:0,78,1131	0/0:29,0:27:66.09:0,66,1118	0/0:26,0:26:69.59:0,70,543	0/0:27,0:25:43.19:0,43,520	0/1:8,0:8:13.83:14,0,87
chr10	4686030	.	CCTTAAT	C	5345.84	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=12.691;DP=702;FS=1.443;HRun=0;HaplotypeScore=145.3448;InbreedingCoeff=0.9678;MQ=72.96;MQ0=0;MQRankSum=-13.972;QD=55.11;ReadPosRankSum=1.551;VQSLOD=4.9910;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,31:34:75.26:1714,75,0	0/0:11,0:11:33.11:0,33,1150	0/0:18,0:18:51.17:0,51,1546	0/0:10,0:10:5.43:0,5,534	0/0:26,0:26:75.26:0,75,2642	0/0:22,0:22:66.23:0,66,2161	0/0:33,0:33:90.31:0,90,3078	0/0:38,0:38:93.32:0,93,3021	0/0:27,0:27:78.22:0,78,2474	0/0:31,0:31:87.30:0,87,3072	0/0:15,0:15:42.14:0,42,1482	0/0:21,0:21:63.20:0,63,2066	0/0:30,0:30:87.30:0,87,3024	0/0:37,0:37:99:0,108,3615	1/1:2,25:27:66.23:1538,66,0	0/0:31,0:31:90.31:0,90,3042	0/0:36,0:36:99:0,99,3414	1/1:1,13:14:39.13:909,39,0	0/0:19,0:19:48.16:0,48,1642	0/0:17,0:17:48.15:0,48,1501	0/0:36,0:36:99:0,108,3747	0/0:27,0:27:78.22:0,78,2560	0/0:20,0:20:60.21:0,60,2042	0/0:30,0:30:90.31:0,90,3143	1/1:2,20:22:51.18:1185,51,0	0/0:34,0:34:96.33:0,96,3319	0/0:24,0:24:63.22:0,63,2169	0/0:12,0:12:26.52:0,27,920
chr10	4686230	.	GT	G	1082.97	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.236;DP=622;FS=2.120;HRun=6;HaplotypeScore=69.4073;InbreedingCoeff=0.9940;MQ=63.60;MQ0=3;MQRankSum=-1.475;QD=27.77;ReadPosRankSum=0.493;VQSLOD=4.2059;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,35:39:99:1178,111,0	0/0:9,0:9:27.07:0,27,338	0/0:21,1:16:29.27:0,29,397	0/0:28,0:24:54.15:0,54,676	0/0:17,0:17:51.16:0,51,653	0/0:17,0:17:42.11:0,42,522	0/0:24,0:24:66.13:0,66,804	0/0:30,0:30:78.24:0,78,1012	0/0:28,0:28:78.25:0,78,1025	0/0:20,0:20:60.19:0,60,777	0/0:15,0:15:45.15:0,45,592	0/0:14,0:14:39.13:0,39,513	0/0:19,0:19:54.18:0,54,710	0/0:26,0:26:75.20:0,75,954	0/0:21,0:21:60.16:0,60,770	0/0:25,0:25:60.18:0,60,774	0/0:27,0:27:75.23:0,75,970	0/0:17,0:17:45.10:0,45,573	0/0:28,0:28:78.24:0,78,1011	0/0:8,0:8:21.07:0,21,275	0/0:31,0:31:93.29:0,93,1209	0/0:22,0:22:63.19:0,63,809	0/0:21,0:21:60.15:0,60,742	0/0:25,0:25:72.22:0,72,933	0/0:22,0:22:63.19:0,63,803	0/0:32,0:32:93.29:0,93,1199	0/0:23,0:23:66.20:0,66,851	0/0:12,0:12:33.11:0,33,434
chr10	4686738	.	T	TA	2015.72	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-9.376;DP=646;FS=0.564;HRun=1;HaplotypeScore=60.1381;InbreedingCoeff=0.9961;MQ=58.27;MQ0=13;MQRankSum=0.960;QD=39.52;ReadPosRankSum=2.403;VQSLOD=4.2843;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,135,1746	0/0:9,0:9:24.08:0,24,312	0/0:33,0:13:35.82:0,36,401	0/0:36,0:22:60.16:0,60,749	0/0:16,0:16:48.16:0,48,622	0/0:27,0:27:78.25:0,78,1012	0/0:29,0:29:87.26:0,87,1112	0/0:24,0:23:69.22:0,69,884	0/0:23,0:23:63.20:0,63,817	0/0:23,0:21:63.20:0,63,806	0/0:15,0:15:39.13:0,39,506	0/0:19,0:19:57.19:0,57,740	0/0:14,0:14:42.14:0,42,545	0/0:15,0:15:42.14:0,42,545	0/0:31,0:31:93.28:0,93,1191	0/0:25,0:25:72.23:0,72,934	0/0:29,0:28:84.27:0,84,1091	0/0:28,0:28:80.81:0,81,1001	0/0:28,0:26:78.25:0,78,1012	0/0:21,0:21:63.20:0,63,818	0/0:32,0:31:87.28:0,87,1129	0/0:13,0:13:39.13:0,39,506	0/0:11,0:11:30.10:0,30,388	0/0:28,0:28:81.26:0,81,1052	0/0:20,0:20:57.19:0,57,739	1/1:1,23:24:69.23:1034,69,0	1/1:1,19:20:57.19:854,57,0	1/1:0,7:7:18.06:270,18,0
chr10	4687169	.	TA	T	1022.39	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.032;DP=531;FS=0.000;HRun=11;HaplotypeScore=57.3277;InbreedingCoeff=0.8800;MQ=72.44;MQ0=2;MQRankSum=0.516;QD=11.75;ReadPosRankSum=-0.983;VQSLOD=2.7408;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:25:32.58:94,33,0	0/0:8,0:8:15.04:0,15,160	0/0:16,0:15:21.80:0,22,209	0/0:16,0:9:18.90:0,19,178	0/0:20,2:22:4.85:0,5,463	0/0:19,1:20:23.45:0,23,440	0/0:17,0:17:39.10:0,39,416	1/1:9,28:37:80.88:665,81,0	0/0:15,0:15:27.06:0,27,280	0/0:32,0:32:69.17:0,69,729	0/0:17,1:18:14.74:0,15,359	0/0:17,0:17:45.11:0,45,480	0/0:27,1:28:47.62:0,48,711	0/0:19,1:20:29.33:0,29,474	0/0:18,0:18:45.10:0,45,472	0/0:15,0:15:34.64:0,35,356	1/1:5,18:24:36.35:405,36,0	0/0:19,0:19:48.11:0,48,506	0/0:17,1:18:14.45:0,14,359	0/0:8,0:8:21.05:0,21,224	0/0:5,0:5:12.03:0,12,128	0/0:15,0:15:30.03:0,30,301	0/0:15,1:16:14.45:0,14,359	0/0:9,1:10:5.27:0,5,246	0/0:20,1:22:23.31:0,23,438	0/0:23,1:24:35.50:0,36,583	0/0:26,0:27:59.95:0,60,606	0/0:16,0:16:39.07:0,39,404
chr10	4687483	.	TTG	T	112.54	PASS	AB=0.967;AC=12;AF=0.214;AN=56;BaseQRankSum=5.671;DP=337;FS=15.952;HRun=0;HaplotypeScore=62.3295;InbreedingCoeff=0.2793;MQ=72.92;MQ0=24;MQRankSum=-1.372;QD=0.90;ReadPosRankSum=-1.974;VQSLOD=-0.1091;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,1:19:3.14:0,3,33	0/1:2,0:2:0.02:0,0,0	0/0:52,0:15:20.20:0,20,193	0/1:69,0:13:16.36:16,0,32	0/0:6,0:5:15.05:0,15,248	0/0:4,1:5:9.01:0,9,148	0/0:8,0:8:15.04:0,15,227	0/0:14,0:12:28.13:0,28,421	0/1:12,0:12:6.99:7,0,192	0/0:14,0:14:30.56:0,31,516	0/0:4,0:4:6.02:0,6,94	0/0:14,0:12:32.74:0,33,529	0/0:5,1:6:11.68:0,12,127	0/0:9,0:9:24.08:0,24,392	0/1:8,0:8:20.06:26,0,20	0/0:10,0:10:23.65:0,24,343	1/1:13,0:13:6.88:26,7,0	1/1:5,0:4:5.60:76,6,0	0/0:7,1:7:21.07:0,21,376	0/1:6,2:8:30.29:72,0,30	0/0:15,0:15:24.05:0,24,373	0/0:4,0:4:9.03:0,9,153	0/0:4,0:4:9.03:0,9,127	0/0:10,0:10:27.09:0,27,426	0/0:5,0:5:5.75:0,6,72	0/1:6,0:5:0.38:0,0,12	0/0:4,0:4:4.55:0,5,18	1/1:2,0:1:3:25,3,0
chr10	4687485	.	GCTCGCT	G	479.33	PASS	AB=1.000;AC=16;AF=0.286;AN=56;BaseQRankSum=6.053;DP=336;FS=2.196;HRun=0;HaplotypeScore=73.2833;InbreedingCoeff=0.5453;MQ=73.07;MQ0=24;MQRankSum=-1.613;QD=3.26;ReadPosRankSum=-2.353;VQSLOD=0.9875;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,15:19:11.78:219,12,0	0/0:2,0:2:0.89:0,1,2	0/0:52,0:15:12.46:0,12,99	0/1:69,0:13:10.89:55,0,11	0/0:6,0:5:12.02:0,12,263	0/0:5,0:5:9.03:0,9,242	0/0:8,0:8:12.04:0,12,300	1/1:8,5:11:9.01:117,9,0	0/0:13,0:13:15.05:0,15,391	0/0:14,0:14:16.28:0,16,285	0/0:3,0:3:6.02:0,6,167	0/0:14,0:12:21.06:0,21,534	0/0:7,0:7:7.61:0,8,170	0/0:9,0:9:12.04:0,12,345	0/1:6,0:6:0.01:0,0,0	0/0:10,0:10:18.06:0,18,532	1/1:7,5:12:6.02:127,6,0	0/1:5,0:4:13.16:13,0,13	0/0:8,0:7:12.02:0,12,251	0/1:8,0:8:2.07:2,0,87	0/0:15,0:15:29.83:0,30,747	0/0:4,0:4:6.02:0,6,184	0/0:3,0:3:6.02:0,6,129	0/0:10,0:10:27.06:0,27,619	0/0:6,0:6:0.33:0,0,0	1/1:6,0:5:6.03:25,6,0	1/1:4,0:4:10.59:46,11,0	1/1:4,0:3:5.91:38,6,0
chr10	4687491	.	T	TCG	583.51	PASS	AB=0.938;AC=10;AF=0.179;AN=56;BaseQRankSum=4.259;DP=342;FS=0.000;HRun=0;HaplotypeScore=66.3560;InbreedingCoeff=0.3830;MQ=74.07;MQ0=25;MQRankSum=-3.349;QD=9.12;ReadPosRankSum=-2.649;VQSLOD=2.5352;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:22:11:169,0,11	1/1:1,0:1:0.47:1,0,0	0/0:52,0:15:28.13:0,28,260	0/0:72,0:14:5.01:0,5,83	0/0:6,0:5:15.05:0,15,230	0/0:5,0:5:9.03:0,9,138	0/0:7,0:7:15.05:0,15,230	0/1:15,0:13:42.64:43,0,179	0/0:12,0:12:17.92:0,18,275	0/0:12,0:11:30.05:0,30,431	0/0:4,0:4:6.02:0,6,92	0/0:13,0:13:36.11:0,36,531	0/0:8,0:8:15.05:0,15,208	0/0:9,0:9:24.08:0,24,367	0/0:5,0:5:2.94:0,3,18	0/0:9,0:9:12.71:0,13,268	0/1:11,0:11:4.24:18,0,4	0/0:6,0:5:11.66:0,12,99	0/0:11,0:8:24.03:0,24,322	0/0:6,0:6:7.10:0,7,65	0/0:15,0:15:32.84:0,33,471	0/0:6,0:6:2.95:0,3,150	0/0:4,0:4:12.03:0,12,162	0/0:10,0:10:27.09:0,27,413	0/0:6,0:6:5.69:0,6,57	1/1:2,4:5:11.40:180,11,0	1/1:1,4:5:12.04:230,12,0	0/1:2,1:3:2.86:82,0,3
chr10	4687509	.	T	TTG	263.80	PASS	AB=0.700;AC=5;AF=0.089;AN=56;BaseQRankSum=5.136;DP=276;FS=1.070;HRun=0;HaplotypeScore=61.9097;InbreedingCoeff=0.4997;MQ=83.40;MQ0=9;MQRankSum=-4.210;QD=13.88;ReadPosRankSum=-4.246;VQSLOD=2.6760;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:19.37:0,19,209	0/0:2,0:2:4.26:0,4,52	0/0:26,0:16:16.53:0,17,231	0/0:50,0:18:19.19:0,19,202	0/0:5,0:5:15.05:0,15,242	0/0:3,0:3:9.03:0,9,147	0/0:4,0:4:12.04:0,12,196	0/0:18,0:16:45.13:0,45,698	0/0:7,0:7:18.06:0,18,294	0/0:7,0:6:15.05:0,15,236	0/0:4,0:4:6.22:0,6,142	0/0:10,0:10:27.09:0,27,440	0/0:5,0:5:9.03:0,9,145	0/0:7,0:7:13.33:0,13,242	1/1:4,1:5:7.26:87,7,0	0/0:8,0:8:19.23:0,19,340	0/0:11,0:11:14.99:0,15,190	0/1:4,3:6:27.70:125,0,28	0/0:9,0:6:18.06:0,18,288	0/0:2,0:2:5.99:0,6,70	0/0:17,0:17:38.92:0,39,635	0/0:9,0:9:11.84:0,12,330	0/0:3,0:3:9.03:0,9,146	0/0:9,0:9:24.07:0,24,367	1/1:5,2:7:12.04:168,12,0	0/0:6,0:5:12.04:0,12,196	0/0:6,0:6:18.06:0,18,293	0/0:2,0:2:6.02:0,6,98
chr10	4687535	.	T	TC	109.49	PASS	AB=1.000;AC=6;AF=0.115;AN=52;BaseQRankSum=2.705;DP=223;FS=4.542;HRun=5;HaplotypeScore=47.4853;InbreedingCoeff=0.2527;MQ=67.05;MQ0=8;MQRankSum=-1.043;QD=6.08;ReadPosRankSum=-0.392;VQSLOD=-0.6824;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:53.59:0,54,528	0/0:4,0:3:6.01:0,6,64	0/0:25,0:10:2.05:0,2,101	0/0:20,0:7:6.85:0,7,93	0/0:1,0:1:3.01:0,3,32	0/1:4,0:4:2.63:3,0,27	0/0:2,0:2:0.47:0,0,1	0/0:23,0:23:42.90:0,43,435	0/0:4,0:4:5.31:0,5,57	0/0:4,0:4:7.54:0,8,68	0/0:5,0:5:6.01:0,6,65	0/1:7,0:7:20.05:20,0,53	0/0:4,0:4:0.44:0,0,21	0/0:4,0:4:5.67:0,6,64	0/0:6,0:5:12.03:0,12,129	0/0:7,0:7:4.59:0,5,82	0/0:13,0:13:21.03:0,21,214	0/0:9,0:9:17.94:0,18,183	./.	0/0:3,0:3:2.99:0,3,24	0/0:15,0:13:23.28:0,23,214	0/0:7,0:6:10.36:0,10,118	0/0:3,0:2:6.02:0,6,64	0/0:3,0:3:2.92:0,3,32	0/0:8,0:8:7.17:0,7,67	./.	1/1:2,3:5:9.03:117,9,0	1/1:0,2:2:6.02:79,6,0
chr10	4689241	.	G	GCA	3726.78	PASS	AB=0.590;AC=9;AF=0.161;AN=56;BaseQRankSum=-3.651;DP=1030;FS=1.919;HRun=0;HaplotypeScore=124.1978;InbreedingCoeff=0.8556;MQ=53.26;MQ0=31;MQRankSum=2.078;QD=24.52;ReadPosRankSum=3.466;VQSLOD=4.4443;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:28,34:61:92.16:1917,92,0	0/0:13,0:13:36.05:0,36,414	0/0:36,0:7:14.98:0,15,165	0/0:71,0:19:24:0,24,271	0/0:28,0:29:50.94:0,51,590	0/0:21,0:20:54.17:0,54,668	0/0:42,0:42:53.23:0,53,1093	0/0:13,0:28:35.25:0,35,161	0/0:36,0:37:96.44:0,96,1180	0/0:41,0:43:92.95:0,93,1100	0/0:14,0:15:32.94:0,33,385	0/0:36,0:37:66.01:0,66,766	0/0:38,0:39:99:0,105,1277	0/0:40,0:39:99:0,105,1287	1/1:9,14:23:13.45:288,13,0	0/0:23,0:23:45.12:0,45,544	1/1:8,21:29:13.39:709,13,0	1/1:5,9:14:30.10:492,30,0	0/0:28,0:27:50.61:0,51,624	0/0:22,0:21:45.14:0,45,555	0/0:149,0:146:99:0,328,4039	0/0:34,0:35:96.07:0,96,1122	0/0:23,0:23:60.18:0,60,730	0/0:62,0:63:99:0,147,1754	0/1:7,16:22:13.95:320,0,14	0/0:50,0:46:99:0,108,1321	0/0:15,0:15:36.11:0,36,446	0/0:13,0:13:23.27:0,23,253
chr10	4689279	.	ACACACG	A	62.49	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=3.673;DP=1004;FS=0.000;HRun=0;HaplotypeScore=201.8520;InbreedingCoeff=0.8280;MQ=53.34;MQ0=19;MQRankSum=-0.095;QD=1.79;ReadPosRankSum=-1.583;VQSLOD=2.4877;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:70,0:70:99:0,144,4365	0/0:11,0:11:30.10:0,30,976	0/0:55,0:8:21.06:0,21,452	0/0:65,0:20:50.98:0,51,1142	0/0:24,0:24:57.18:0,57,1832	0/0:19,0:19:51.14:0,51,1538	0/0:32,0:32:93.30:0,93,2760	0/0:27,0:26:60.80:0,61,1511	0/0:31,0:31:90.28:0,90,2469	0/0:37,0:37:99:0,108,3108	0/0:19,0:19:42.14:0,42,1270	0/0:37,0:37:99:0,102,3319	0/0:41,0:41:99:0,114,3329	0/0:50,0:50:99:0,144,4631	1/1:11,2:13:2.75:38,3,0	0/0:18,0:18:48.06:0,48,1373	0/0:30,0:30:63.14:0,63,1796	1/1:6,1:7:8.60:79,9,0	0/0:29,0:23:57.19:0,57,1648	0/0:19,0:19:48.14:0,48,1391	0/0:162,0:161:99:0,417,12660	0/0:29,0:29:72.25:0,72,2188	0/0:22,0:22:66.23:0,66,1971	0/0:69,0:69:99:0,183,5962	1/1:8,7:15:3.01:59,3,0	0/0:41,0:41:99:0,120,3567	0/0:12,0:12:27.08:0,27,713	0/0:19,0:19:57.20:0,57,1849
chr10	4689284	.	C	CACAT	114.12	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=3.570;DP=1000;FS=0.000;HRun=0;HaplotypeScore=166.2665;InbreedingCoeff=0.8334;MQ=53.48;MQ0=18;MQRankSum=0.092;QD=4.08;ReadPosRankSum=-1.629;VQSLOD=2.1220;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:69,0:69:99:0,147,2800	0/0:13,0:13:36.05:0,36,648	0/0:57,0:10:22.45:0,22,403	0/0:66,0:23:52.13:0,52,850	0/0:19,0:19:57.18:0,57,1149	0/0:20,0:20:54.12:0,54,1032	0/0:32,0:32:96.26:0,96,1895	0/0:25,0:25:61.03:0,61,1036	0/0:33,0:33:93.27:0,93,1770	0/0:37,0:37:99:0,111,2182	0/0:18,0:18:48.08:0,48,853	0/0:37,0:37:99:0,102,2049	0/0:40,0:40:99:0,114,2214	0/0:48,0:48:99:0,144,2921	1/1:7,4:11:3.42:51,3,0	0/0:21,0:21:53.74:0,54,948	0/0:28,0:28:63.09:0,63,1202	1/1:3,0:3:8.04:103,8,0	0/0:25,0:19:57.18:0,57,1115	0/0:18,0:18:51.10:0,51,932	0/0:167,0:166:99:0,435,8324	0/0:27,0:27:72.25:0,72,1492	0/0:24,0:24:69.18:0,69,1343	0/0:67,0:67:99:0,184,3729	1/1:12,2:14:3.01:73,3,0	0/0:44,0:44:99:0,126,2475	0/0:13,0:13:27.08:0,27,497	0/0:20,0:20:60.18:0,60,1213
chr10	4689321	.	GCACA	G	269.66	PASS	AB=0.500;AC=5;AF=0.089;AN=56;BaseQRankSum=4.744;DP=957;FS=3.036;HRun=0;HaplotypeScore=192.5557;InbreedingCoeff=0.7922;MQ=55.41;MQ0=15;MQRankSum=-4.533;QD=7.29;ReadPosRankSum=0.514;VQSLOD=2.7911;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:61,0:61:99:0,114,2949	0/0:12,0:12:36.12:0,36,858	0/0:32,0:10:21.07:0,21,458	0/0:43,0:18:15.85:0,16,513	0/0:23,0:23:69.24:0,69,1770	0/0:17,0:18:51.11:0,51,1207	0/0:39,0:40:99:0,114,2798	0/0:47,0:47:99:0,120,2860	0/0:27,0:27:66.18:0,66,1663	0/0:30,0:30:81.28:0,81,1982	0/0:19,0:19:48.64:0,49,1212	0/0:39,0:39:99:0,102,2667	0/0:33,0:33:81.27:0,81,2011	0/0:53,0:53:99:0,147,3714	0/1:0,15:15:0:0,0,0	0/0:22,0:22:63.22:0,63,1649	0/0:31,0:31:69.24:0,69,1756	1/1:1,8:9:7.03:313,7,0	0/0:30,0:25:60.21:0,60,1451	0/0:22,0:22:60.21:0,60,1537	0/0:136,0:136:99:0,345,8415	0/0:30,0:30:81.28:0,81,2028	0/0:17,0:17:48.16:0,48,1229	0/0:60,0:60:99:0,171,4165	1/1:1,12:13:3.01:54,3,0	0/0:49,0:49:99:0,126,3054	0/0:24,0:23:60.21:0,60,1522	0/0:22,0:21:57.20:0,57,1491
chr10	4689371	.	G	GGGAAGGAA	1993.96	PASS	AB=0.962;AC=10;AF=0.192;AN=52;BaseQRankSum=0.544;DP=874;FS=20.762;HRun=0;HaplotypeScore=284.5351;InbreedingCoeff=0.6309;MQ=60.88;MQ0=5;MQRankSum=-3.208;QD=16.08;ReadPosRankSum=-2.553;VQSLOD=1.2772;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:3.87:0,4,28	0/0:10,0:10:15.01:0,15,224	./.	./.	0/0:22,0:22:41.60:0,42,867	0/0:20,0:20:33.10:0,33,730	0/0:45,0:45:60.60:0,61,1078	1/1:25,0:24:8.45:76,8,0	0/0:33,0:33:60.16:0,60,1229	0/0:46,0:46:20.29:0,20,1533	0/0:15,0:15:24.06:0,24,474	0/0:36,0:36:12.18:0,12,1149	0/0:31,0:31:60.05:0,60,1270	0/0:51,0:50:99:0,105,1904	1/1:23,5:27:47.99:987,48,0	0/0:28,0:27:45.14:0,45,1068	0/0:30,0:30:12.18:0,12,661	0/1:11,1:12:31.99:312,0,32	0/0:34,0:32:39.03:0,39,795	0/0:31,0:31:53.50:0,54,879	0/0:79,0:79:99:0,107,1847	0/0:26,0:26:20.06:0,20,798	0/0:17,0:17:29.99:0,30,634	0/0:53,0:53:58.29:0,58,1863	1/1:19,3:22:29.85:709,30,0	0/0:25,0:25:8.06:0,8,467	0/1:28,0:28:40.12:40,0,295	1/1:9,0:9:3.70:24,4,0
chr10	4689422	.	A	AGAGG	1833.47	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=4.784;DP=806;FS=18.534;HRun=0;HaplotypeScore=193.8940;InbreedingCoeff=0.9932;MQ=63.52;MQ0=5;MQRankSum=-4.050;QD=35.26;ReadPosRankSum=-1.534;VQSLOD=1.7753;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:51.63:0,52,783	0/0:7,0:7:21.06:0,21,338	0/0:24,0:15:39.42:0,39,541	0/0:20,0:15:39.10:0,39,593	0/0:27,0:27:72.25:0,72,1251	0/0:22,0:22:57.18:0,57,936	0/0:36,0:36:76.69:0,77,1347	0/0:37,0:37:90.29:0,90,1501	0/0:36,0:36:90.31:0,90,1543	0/0:42,0:42:93.27:0,93,1529	0/0:11,0:11:24.08:0,24,401	0/0:34,0:34:78.24:0,78,1272	0/0:40,0:40:99:0,102,1763	0/0:42,0:42:87.28:0,87,1477	0/0:20,0:23:40.35:0,40,565	0/0:32,0:31:78.24:0,78,1288	0/0:31,0:31:81.26:0,81,1376	0/0:16,0:17:29.94:0,30,551	0/0:31,0:29:72.15:0,72,1164	0/0:24,0:24:69.22:0,69,1141	0/0:57,0:57:99:0,141,2377	0/0:23,0:22:51.17:0,51,880	0/0:23,0:23:64.60:0,65,1096	0/0:44,0:44:99:0,111,1906	0/0:15,0:18:42.02:0,42,576	1/1:7,16:24:60.19:1161,60,0	1/1:8,9:20:17.97:404,18,0	1/1:7,0:7:21.03:410,21,0
chr10	4691848	.	GATAATAATAATAATA	G	1991.46	PASS	AB=0.765;AC=7;AF=0.140;AN=50;BaseQRankSum=2.552;DP=247;FS=0.000;HRun=0;HaplotypeScore=105.8278;InbreedingCoeff=0.4891;MQ=72.94;MQ0=0;MQRankSum=-5.923;QD=28.86;ReadPosRankSum=-0.970;VQSLOD=2.2476;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:9:9.03:0,9,196	0/0:5,0:5:12.04:0,12,849	0/0:10,0:9:3.01:0,3,123	./.	0/0:5,0:5:6.02:0,6,432	0/0:8,0:8:21.07:0,21,1483	0/0:4,0:4:3.01:0,3,216	0/0:23,0:30:48.16:0,48,1347	0/0:6,0:6:6.02:0,6,268	0/0:7,0:7:9.03:0,9,613	./.	0/0:5,0:9:9.03:0,9,228	0/0:2,0:4:6.02:0,6,152	0/0:3,0:6:9.03:0,9,227	1/1:5,5:10:11.79:477,12,0	0/0:7,0:7:12.04:0,12,677	0/1:18,0:26:27.72:28,0,158	1/1:11,6:17:15.05:512,15,0	0/0:9,0:9:12.04:0,12,772	0/0:4,0:7:6.02:0,6,237	0/0:4,0:5:9.03:0,9,617	./.	0/0:3,0:3:3.01:0,3,37	0/0:1,0:2:3.01:0,3,76	1/1:4,12:16:27.09:1110,27,0	0/0:6,0:7:12.04:0,12,470	0/0:8,0:12:18.04:0,18,783	0/0:5,0:13:27.09:0,27,1771
chr10	4693418	.	CACTGGG	C	769.50	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.309;DP=657;FS=1.109;HRun=0;HaplotypeScore=134.1955;InbreedingCoeff=0.9625;MQ=88.15;MQ0=0;MQRankSum=-5.789;QD=40.50;ReadPosRankSum=-0.491;VQSLOD=3.5340;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,18:19:36.12:864,36,0	0/0:4,0:4:12.04:0,12,433	0/0:28,0:28:81.23:0,81,2601	0/0:20,0:20:60.21:0,60,2002	0/0:17,0:17:48.16:0,48,1564	0/0:20,0:20:60.21:0,60,2043	0/0:34,0:34:99:0,99,3476	0/0:40,0:40:99:0,114,3917	0/0:25,0:25:72.23:0,72,2490	0/0:24,0:24:72.25:0,72,2523	0/0:14,0:14:39.13:0,39,1374	0/0:34,0:34:96.32:0,96,3320	0/0:21,0:21:60.19:0,60,2014	0/0:18,0:18:51.13:0,51,1589	0/0:20,0:20:54.18:0,54,1877	0/0:23,0:23:69.24:0,69,2456	0/0:28,0:28:81.28:0,81,2752	0/0:19,0:19:54.19:0,54,1826	0/0:27,0:27:78.26:0,78,2654	0/0:16,0:16:48.15:0,48,1627	0/0:56,0:56:99:0,163,5688	0/0:20,0:20:60.21:0,60,2086	0/0:21,0:21:63.22:0,63,2235	0/0:37,0:37:99:0,108,3777	0/0:13,0:13:36.12:0,36,1293	0/0:26,0:26:78.26:0,78,2660	0/0:25,0:25:63.22:0,63,2183	0/0:8,0:8:18.06:0,18,570
chr10	4693483	.	TACACACACAC	T	3895.18	PASS	AB=0.611;AC=7;AF=0.125;AN=56;BaseQRankSum=6.877;DP=672;FS=7.414;HRun=0;HaplotypeScore=202.0038;InbreedingCoeff=0.7598;MQ=56.00;MQ0=7;MQRankSum=-6.435;QD=47.50;ReadPosRankSum=-1.934;VQSLOD=2.1246;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:27:33.11:0,33,1213	0/0:11,0:11:30.10:0,30,1217	0/0:18,0:4:1.55:0,2,4	0/0:21,0:5:6.02:0,6,253	0/0:16,0:18:39.13:0,39,1657	0/0:24,0:27:56.39:0,56,2226	0/0:35,0:35:75.26:0,75,3272	1/1:9,13:22:42.12:969,42,0	0/0:32,0:32:80.37:0,80,3807	0/0:25,0:28:63.20:0,63,2663	0/0:14,0:16:33.11:0,33,1358	0/0:25,0:27:66.23:0,66,2880	0/0:19,0:25:69.24:0,69,2784	0/0:25,0:30:69.24:0,69,3138	0/0:11,0:30:30.10:0,30,1175	0/0:13,0:19:51.16:0,51,1903	0/0:21,0:21:9.03:0,9,294	0/0:19,0:23:42.14:0,42,1523	0/0:23,0:23:37.94:0,38,1493	0/0:21,0:22:48.16:0,48,2262	0/0:30,0:31:66.23:0,66,2446	0/0:22,0:25:57.19:0,57,2232	0/0:25,0:27:53.60:0,54,2144	0/0:26,0:29:51.17:0,51,2323	0/0:6,0:24:33.11:0,33,1210	1/1:7,19:28:63.65:1679,64,0	1/1:6,15:21:33.07:830,33,0	0/1:4,6:11:99:417,0,129
chr10	4696370	.	TG	T	1230.31	PASS	AB=0.958;AC=37;AF=0.661;AN=56;BaseQRankSum=0.684;DP=492;FS=1.837;HRun=12;HaplotypeScore=74.7382;InbreedingCoeff=0.2904;MQ=76.74;MQ0=1;MQRankSum=-0.992;QD=3.21;ReadPosRankSum=2.569;VQSLOD=-0.0559;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:21,1:23:5.01:50,5,0	0/1:3,1:4:17.10:17,0,17	0/0:19,0:18:4.87:0,5,107	0/1:15,0:14:9.08:9,0,74	1/1:11,0:11:2.22:7,2,0	0/1:7,0:7:9.86:10,0,46	1/1:13,16:31:4.75:208,5,0	1/1:20,1:21:2.86:23,3,0	0/1:18,1:19:28.36:28,0,40	1/1:21,1:23:4.97:29,5,0	1/1:5,0:6:2.03:6,2,0	1/1:16,1:17:8.94:67,9,0	1/1:17,2:19:24.11:162,24,0	1/1:15,6:21:17.92:139,18,0	0/0:21,0:21:38.27:0,38,270	0/0:16,0:16:9.50:0,9,136	1/1:14,0:28:37.53:107,38,0	0/0:26,0:25:47.08:0,47,342	0/1:17,0:17:10.13:10,0,94	0/0:10,0:10:5.85:0,6,51	0/1:22,1:23:8.32:8,0,46	0/1:13,0:14:14.24:14,0,38	1/1:11,0:11:2.64:19,3,0	1/1:12,6:18:35.81:269,36,0	0/0:17,0:17:9.02:0,9,151	1/1:8,0:21:26.14:81,26,0	1/1:5,0:20:32.59:95,33,0	1/1:4,0:13:16.29:48,16,0
chr10	4696380	.	GGGT	G	487.18	PASS	AB=0.923;AC=4;AF=0.071;AN=56;BaseQRankSum=4.568;DP=456;FS=26.869;HRun=0;HaplotypeScore=88.9581;InbreedingCoeff=0.2983;MQ=76.54;MQ0=1;MQRankSum=-1.250;QD=8.70;ReadPosRankSum=7.021;VQSLOD=0.7225;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:48.33:0,48,499	0/0:4,0:4:12.01:0,12,150	0/0:18,0:17:35.25:0,35,424	0/0:16,0:15:27.01:0,27,286	0/0:6,0:6:5.97:0,6,58	0/0:6,0:6:18.04:0,18,267	0/0:37,0:37:76.56:0,77,652	0/0:20,0:20:50.83:0,51,477	0/0:16,0:16:30.53:0,31,391	0/0:8,0:8:20.35:0,20,180	0/0:4,0:4:8.48:0,8,58	0/0:17,0:17:32.54:0,33,344	0/0:14,0:14:34.36:0,34,306	0/0:13,0:13:29.49:0,29,237	0/0:21,0:21:63.13:0,63,835	0/0:12,0:12:30.07:0,30,482	0/0:27,0:26:33.54:0,34,200	0/0:22,0:22:66.14:0,66,933	0/0:14,0:14:32.91:0,33,454	0/0:14,0:14:26.87:0,27,308	0/0:21,0:21:45.03:0,45,546	0/0:14,0:14:23.98:0,24,336	0/0:8,0:8:0.58:0,1,56	0/0:24,0:24:60.11:0,60,499	0/0:19,0:19:51.07:0,51,618	0/1:18,4:22:30.06:210,0,30	1/1:19,1:20:7.40:305,7,0	0/1:14,0:14:64.79:78,0,65
chr10	4697273	.	A	AT	2784.14	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-8.807;DP=539;FS=2.561;HRun=8;HaplotypeScore=55.4107;InbreedingCoeff=0.9807;MQ=68.44;MQ0=0;MQRankSum=-2.445;QD=25.31;ReadPosRankSum=-0.588;VQSLOD=4.1614;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:1,0:26:42.78:0,43,125	0/0:11,0:11:30.01:0,30,274	0/0:16,0:13:16.68:0,17,229	0/0:9,0:8:8.08:0,8,51	0/0:24,0:24:63.01:0,63,571	0/0:18,0:18:51.02:0,51,467	0/0:18,0:18:51.01:0,51,462	1/1:3,22:25:66.18:749,66,0	0/0:24,0:24:66.01:0,66,600	0/0:24,0:24:63.01:0,63,569	0/0:30,0:30:84.03:0,84,764	0/0:21,0:21:57:0,57,516	0/0:12,0:12:32.98:0,33,294	0/0:16,0:16:44.99:0,45,404	0/0:15,0:15:39.02:0,39,357	0/0:13,0:13:36.02:0,36,330	1/1:3,17:20:42.12:485,42,0	0/0:22,0:22:56.16:0,56,520	0/0:15,0:15:36.01:0,36,329	0/0:19,0:19:48.02:0,48,439	0/0:14,0:14:33.02:0,33,302	0/0:16,0:16:45.02:0,45,412	0/0:25,1:26:37.41:0,37,592	0/0:14,0:14:42.02:0,42,384	0/0:25,0:25:69.03:0,69,632	1/1:2,24:26:47.74:793,48,0	1/1:1,18:19:54.16:621,54,0	1/1:7,13:20:27.08:312,27,0
chr10	4697381	.	T	TGCGCGCGCGC	1607.64	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=5.304;DP=501;FS=2.354;HRun=0;HaplotypeScore=178.7676;InbreedingCoeff=0.6372;MQ=61.11;MQ0=5;MQRankSum=-7.558;QD=13.74;ReadPosRankSum=-1.324;VQSLOD=1.9975;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:62.92:0,63,1649	0/0:9,0:9:21.07:0,21,581	0/0:16,0:7:11.99:0,12,188	0/0:23,0:16:29.14:0,29,837	0/0:16,0:16:39.10:0,39,1015	0/0:19,0:19:51.13:0,51,1336	0/0:18,0:18:42.13:0,42,1193	1/1:17,0:15:19.86:150,20,0	0/0:18,0:18:45.12:0,45,1204	0/0:13,0:13:30.09:0,30,771	0/0:15,0:15:39.13:0,39,1150	0/0:24,0:24:51.15:0,51,1354	0/0:9,0:9:18.06:0,18,518	0/0:21,0:21:48.15:0,48,1263	0/1:13,0:12:31.75:32,0,254	0/0:12,0:12:32.99:0,33,785	1/1:19,0:19:14.03:269,14,0	0/1:23,0:23:28.98:29,0,1223	0/0:16,0:15:33.11:0,33,1038	0/0:18,0:18:39.13:0,39,1181	0/0:39,0:39:84.19:0,84,2211	0/0:10,0:10:27.08:0,27,743	0/0:12,0:12:30.10:0,30,870	0/0:30,0:30:81.16:0,81,2211	0/1:18,0:17:22.71:23,0,456	1/1:8,6:16:17.10:556,17,0	1/1:3,1:7:11.74:569,12,0	1/1:2,0:4:3:153,3,0
chr10	4697534	.	C	CTT	2415.68	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=10.340;DP=593;FS=0.000;HRun=3;HaplotypeScore=110.4970;InbreedingCoeff=0.9990;MQ=84.81;MQ0=0;MQRankSum=-10.115;QD=29.82;ReadPosRankSum=-2.609;VQSLOD=2.3256;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,108,1504	0/0:10,0:10:27.09:0,27,378	0/0:31,0:30:81.22:0,81,1093	0/0:22,0:20:57.30:0,57,685	0/0:22,0:22:63.21:0,63,882	0/0:11,0:11:30.10:0,30,418	0/0:30,0:30:81.27:0,81,1129	1/1:4,16:23:56.95:787,57,0	0/0:21,0:21:63.21:0,63,882	0/0:27,0:27:75.25:0,75,1049	0/0:12,0:12:36.12:0,36,504	0/0:25,0:25:69.21:0,69,932	0/0:18,0:18:51.15:0,51,693	0/0:20,0:20:51.17:0,51,713	0/0:15,0:15:45.15:0,45,626	0/0:19,0:19:54.18:0,54,756	1/1:3,1:18:34.72:243,35,0	0/0:11,0:11:27.09:0,27,374	0/0:12,0:11:30.09:0,30,404	0/0:26,0:26:75.22:0,75,1012	0/0:48,0:48:99:0,120,1655	0/0:18,0:18:54.17:0,54,739	0/0:23,0:23:69.21:0,69,944	0/0:29,0:29:84.22:0,84,1134	0/0:22,0:22:58.60:0,59,816	1/1:4,10:15:41.99:629,42,0	1/1:6,8:14:29.99:475,30,0	1/1:3,7:10:30.07:457,30,0
chr10	4697556	.	TGC	T	1631.20	PASS	AB=0.533;AC=9;AF=0.161;AN=56;BaseQRankSum=11.026;DP=617;FS=0.000;HRun=0;HaplotypeScore=115.9086;InbreedingCoeff=0.8783;MQ=65.56;MQ0=3;MQRankSum=-10.189;QD=26.74;ReadPosRankSum=0.559;VQSLOD=4.4764;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:61.63:0,62,793	0/0:10,0:10:4.67:0,5,308	0/0:24,0:15:38.57:0,39,508	0/0:25,0:15:17.95:0,18,489	0/0:22,0:22:64.97:0,65,1029	0/0:14,0:14:33.11:0,33,622	0/0:32,0:32:81.11:0,81,1310	1/1:2,13:15:39.13:590,39,0	0/0:24,0:24:65.21:0,65,1054	0/0:33,0:33:71.11:0,71,1578	0/0:15,0:15:38.77:0,39,566	0/0:29,0:29:78.24:0,78,1377	0/0:24,0:24:68.58:0,69,1161	0/0:22,0:22:54.27:0,54,1035	0/0:12,0:12:11.71:0,12,83	0/0:25,0:25:75.21:0,75,1332	1/1:7,7:14:19.22:231,19,0	0/0:10,0:10:13.66:0,14,110	0/0:10,0:10:25.76:0,26,417	0/0:28,0:27:69.22:0,69,1224	0/0:61,0:60:99:0,144,2533	0/0:19,0:19:42.14:0,42,784	0/0:25,0:25:68.95:0,69,1175	0/0:29,0:29:61.25:0,61,1363	0/0:22,0:22:21.96:0,22,187	1/1:2,12:14:34.66:433,35,0	0/1:1,7:8:1.49:175,0,1	1/1:0,10:10:30.09:365,30,0
chr10	4697560	.	TGC	T	1148.98	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=11.762;DP=616;FS=4.869;HRun=0;HaplotypeScore=115.8365;InbreedingCoeff=0.9323;MQ=59.04;MQ0=4;MQRankSum=-5.728;QD=11.26;ReadPosRankSum=0.753;VQSLOD=2.8144;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:30.52:0,31,236	0/0:9,0:9:13.11:0,13,320	0/0:21,0:11:5.69:0,6,177	0/0:25,0:14:26.63:0,27,276	0/0:20,0:20:40.19:0,40,748	0/0:15,0:15:33.03:0,33,554	0/0:36,0:36:47.11:0,47,974	1/1:13,0:13:29.38:101,29,0	0/0:25,0:25:50.22:0,50,907	0/0:34,0:34:82.46:0,82,1199	0/0:13,0:13:22.86:0,23,477	0/0:29,0:29:68.12:0,68,1088	0/0:28,0:28:80.65:0,81,1031	0/0:23,0:23:10.76:0,11,729	1/1:6,6:12:29.84:235,30,0	0/0:26,0:25:75.11:0,75,1140	1/1:13,0:13:16.08:62,16,0	1/1:8,2:10:27.71:206,28,0	0/0:10,0:10:20.78:0,21,214	0/0:26,0:25:57.08:0,57,861	0/0:61,0:60:99:0,120,1409	0/0:19,0:19:42.03:0,42,605	0/0:26,0:26:2.29:0,2,894	0/0:28,0:28:47.09:0,47,1126	1/1:15,8:23:51.67:416,52,0	1/1:13,0:13:29.30:129,29,0	1/1:8,0:8:14.20:69,14,0	1/1:10,0:10:28.21:135,28,0
chr10	4697562	.	C	CGT	739.64	PASS	AB=0.950;AC=11;AF=0.196;AN=56;BaseQRankSum=-0.058;DP=650;FS=2.253;HRun=0;HaplotypeScore=140.0015;InbreedingCoeff=0.1650;MQ=58.23;MQ0=4;MQRankSum=1.129;QD=3.59;ReadPosRankSum=-3.690;VQSLOD=1.4435;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:45:12.50:0,12,62	0/0:8,0:9:23.89:0,24,244	1/1:22,0:11:2.97:20,3,0	0/0:25,0:14:1.64:0,2,4	0/1:19,1:21:1.53:2,0,407	0/0:13,0:14:27.02:0,27,309	0/0:28,0:34:53.73:0,54,544	1/1:21,0:21:4.80:25,5,0	0/0:23,0:24:53.64:0,54,581	0/0:33,0:34:56.93:0,57,596	0/0:11,0:12:29.75:0,30,302	0/0:27,0:30:57.47:0,57,602	0/0:28,0:28:48.14:0,48,547	0/0:18,0:21:38.66:0,39,446	0/1:15,0:15:11.54:27,0,12	0/0:25,1:25:1.79:0,2,456	0/1:13,0:15:0.74:1,0,9	0/1:12,0:12:13.71:33,0,14	0/0:10,0:10:5.89:0,6,69	0/0:26,0:25:32.86:0,33,368	0/1:34,27:63:99:713,0,234	0/0:19,0:19:28.81:0,29,285	0/0:26,0:28:35.70:0,36,505	0/0:28,0:31:71.45:0,71,725	0/1:25,0:25:35.34:45,0,35	0/0:9,0:16:19.88:0,20,97	0/1:7,0:11:3.20:3,0,44	0/0:2,0:12:20.53:0,21,92
chr10	4697583	.	GTGTGTGTA	G	1529.94	PASS	AB=0.956;AC=9;AF=0.161;AN=56;BaseQRankSum=9.262;DP=663;FS=1.033;HRun=0;HaplotypeScore=190.3577;InbreedingCoeff=0.0553;MQ=57.95;MQ0=6;MQRankSum=-7.205;QD=9.81;ReadPosRankSum=-0.734;VQSLOD=2.7163;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:38,0:38:57.95:350,0,58	0/0:13,0:13:39.13:0,39,1077	0/0:23,0:13:29.96:0,30,320	0/0:29,0:17:14.14:0,14,241	0/0:21,0:21:57.65:0,58,1970	0/0:16,0:16:36.07:0,36,1249	0/0:34,0:34:78.19:0,78,2153	0/0:29,0:29:84.10:0,84,1168	0/0:24,0:24:63.20:0,63,2193	0/0:32,0:32:77.57:0,78,2472	0/0:18,0:18:51.12:0,51,1403	0/0:27,0:27:63.20:0,63,2157	0/0:25,0:25:66.16:0,66,2147	0/0:24,0:24:69.16:0,69,1974	1/1:12,4:16:10.15:341,10,0	0/0:22,0:21:63.19:0,63,2193	0/1:19,0:19:13.43:13,0,89	0/1:16,1:17:23.71:163,0,24	0/0:17,0:16:42.26:0,42,591	0/0:20,0:19:44.86:0,45,1463	0/0:60,0:59:99:0,117,3588	0/0:16,0:16:33.11:0,33,1129	0/0:28,0:28:66.14:0,66,2206	0/0:29,0:29:84.26:0,84,2932	0/1:14,7:21:50.77:381,0,51	0/1:17,0:17:99:160,0,241	0/1:14,0:14:68.07:68,0,360	0/1:14,0:14:99:198,0,170
chr10	4698400	.	GACAC	G	786.27	PASS	AB=0.913;AC=8;AF=0.143;AN=56;BaseQRankSum=4.170;DP=555;FS=0.000;HRun=0;HaplotypeScore=87.3528;InbreedingCoeff=0.5207;MQ=74.48;MQ0=6;MQRankSum=-0.207;QD=8.45;ReadPosRankSum=1.674;VQSLOD=2.3533;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:49:15.05:0,15,264	0/0:7,0:9:17.80:0,18,335	0/0:35,0:25:4.57:0,5,71	0/0:31,0:20:5.05:0,5,47	0/0:9,0:9:3.01:0,3,71	0/0:8,0:10:8.52:0,9,129	0/0:21,0:21:20.78:0,21,345	0/0:19,0:19:9.03:0,9,140	0/0:21,0:21:24.07:0,24,499	0/0:10,0:10:12:0,12,230	0/0:10,0:10:9.03:0,9,213	0/1:18,1:19:20.44:20,0,326	0/1:10,0:11:6.86:7,0,377	0/0:11,0:14:23.82:0,24,442	1/1:7,4:12:15.04:216,15,0	0/0:16,0:16:21.07:0,21,460	0/0:19,0:27:27.09:0,27,511	1/1:19,15:33:36.12:564,36,0	0/0:15,0:15:6.02:0,6,142	0/0:6,0:7:5.75:0,6,83	0/0:31,0:33:44.84:0,45,807	0/0:17,0:16:20.94:0,21,432	0/0:9,0:9:15.05:0,15,355	0/0:36,0:39:74.73:0,75,1555	1/1:10,4:15:9.02:122,9,0	0/0:18,0:22:28.32:0,28,507	0/0:21,0:23:30.10:0,30,631	0/0:9,0:12:12.04:0,12,228
chr10	4699094	.	CCAG	C	2661.11	PASS	AB=0.541;AC=5;AF=0.089;AN=56;BaseQRankSum=9.017;DP=689;FS=0.519;HRun=0;HaplotypeScore=101.1547;InbreedingCoeff=0.7770;MQ=81.37;MQ0=0;MQRankSum=-5.947;QD=42.24;ReadPosRankSum=1.283;VQSLOD=5.0618;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,117,2742	0/0:6,0:6:18.06:0,18,425	0/0:17,0:17:48.16:0,48,1105	0/0:22,0:22:63.11:0,63,1300	0/0:19,0:19:54.17:0,54,1207	0/0:11,0:11:33.11:0,33,755	0/0:25,0:25:75.24:0,75,1705	0/0:27,0:27:75.25:0,75,1696	0/0:38,0:38:99:0,111,2585	0/0:15,0:15:42.13:0,42,877	0/0:9,0:9:27.09:0,27,636	0/0:37,0:37:99:0,108,2405	0/0:26,0:26:78.25:0,78,1757	0/0:37,0:37:99:0,111,2598	0/0:22,0:22:66.23:0,66,1560	0/0:29,0:29:87.26:0,87,1963	0/0:29,0:29:87.30:0,87,2031	0/0:27,0:27:81.28:0,81,1904	0/0:17,0:17:51.18:0,51,1181	0/0:15,0:15:45.15:0,45,1056	0/0:75,0:75:99:0,223,5123	0/0:20,0:20:60.21:0,60,1375	0/0:10,0:10:30.10:0,30,708	0/0:38,0:38:99:0,114,2678	0/0:15,0:15:45.10:0,45,1007	0/1:3,17:20:83.14:825,0,83	1/1:0,22:23:53.67:961,54,0	1/1:1,19:20:57.20:1005,57,0
chr10	4699725	.	GCA	G	3044.71	PASS	AB=0.928;AC=13;AF=0.232;AN=56;BaseQRankSum=12.968;DP=824;FS=9.830;HRun=0;HaplotypeScore=104.4634;InbreedingCoeff=0.4544;MQ=65.53;MQ0=9;MQRankSum=-0.400;QD=10.84;ReadPosRankSum=2.974;VQSLOD=3.0182;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:12,36:50:98.97:1136,99,0	0/0:11,0:11:6.96:0,7,249	0/0:57,0:34:45.14:0,45,672	0/0:41,0:30:63.16:0,63,922	0/0:31,3:34:9.76:0,10,1107	0/0:19,1:20:12.41:0,12,680	0/0:36,2:38:45.19:0,45,1180	0/1:36,2:38:17.31:17,0,684	0/0:20,0:20:54.18:0,54,860	0/0:36,2:38:21.75:0,22,1319	0/0:26,0:26:41.35:0,41,875	0/1:27,3:31:28.93:29,0,995	0/0:24,1:26:16.39:0,16,882	0/0:25,0:25:63.21:0,63,1001	0/0:28,1:29:36.48:0,36,1040	0/1:25,3:28:11.23:11,0,798	0/0:23,1:24:12.39:0,12,657	0/0:30,2:32:9.80:0,10,1092	0/1:18,1:19:14.71:15,0,241	0/0:23,1:24:27.43:0,27,888	0/1:34,3:37:19.99:20,0,1128	0/0:21,1:22:18.42:0,18,754	0/0:19,1:19:12.24:0,12,674	0/0:37,0:38:67.07:0,67,1172	0/0:16,1:17:6.39:0,6,585	1/1:7,25:33:30.27:812,30,0	1/1:8,21:29:57.17:679,57,0	1/1:1,15:16:42.13:501,42,0
chr10	4699984	.	C	CT	4262.55	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-8.812;DP=594;FS=8.182;HRun=8;HaplotypeScore=55.8360;InbreedingCoeff=0.9925;MQ=55.03;MQ0=14;MQRankSum=2.530;QD=24.50;ReadPosRankSum=2.720;VQSLOD=5.4866;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,0:22:45.45:231,45,0	0/0:10,0:10:24.01:0,24,220	0/0:11,0:5:15.01:0,15,137	0/0:11,0:6:15.01:0,15,137	0/0:31,1:32:49.41:0,49,705	0/0:13,0:13:36:0,36,325	0/0:32,0:31:78.01:0,78,709	0/0:37,0:26:69.04:0,69,630	0/0:22,0:22:50.99:0,51,458	0/0:32,0:32:81.03:0,81,741	0/0:28,0:28:81.02:0,81,735	0/0:13,0:13:27:0,27,247	0/0:12,0:12:33.02:0,33,302	0/0:23,0:22:57.03:0,57,521	1/1:4,18:22:57.16:649,57,0	0/0:17,0:17:39:0,39,353	1/1:7,21:26:63.15:712,63,0	1/1:3,20:23:54.16:623,54,0	0/0:32,0:21:57.02:0,57,518	0/0:21,0:21:51.01:0,51,464	0/0:13,0:13:39.02:0,39,357	0/0:21,0:21:56.90:0,57,510	0/0:13,0:13:36.02:0,36,329	0/0:27,0:26:66.03:0,66,604	1/1:1,21:21:48.14:554,48,0	1/1:3,14:17:17.66:456,18,0	1/1:2,23:25:59.92:693,60,0	1/1:3,10:13:30.09:345,30,0
chr10	4700401	.	ATT	A	3570.78	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=4.737;DP=682;FS=1.689;HRun=11;HaplotypeScore=95.0341;InbreedingCoeff=0.9846;MQ=60.95;MQ0=3;MQRankSum=-1.837;QD=24.46;ReadPosRankSum=2.984;VQSLOD=3.7155;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,43:46:99:1103,105,0	0/0:5,0:5:15.05:0,15,231	0/0:19,0:17:16.51:0,17,226	0/0:21,0:18:40.97:0,41,510	0/0:30,0:32:86.73:0,87,1219	0/0:27,0:29:83.23:0,83,1178	0/0:24,0:25:60.20:0,60,906	0/0:11,0:41:59.68:0,60,247	0/0:19,0:19:51.12:0,51,736	0/0:23,0:25:70.69:0,71,961	0/0:21,0:22:59.67:0,60,848	0/0:17,0:18:44.31:0,44,554	0/0:21,0:22:57.15:0,57,778	0/0:26,0:27:62.70:0,63,930	1/1:2,27:29:72.16:765,72,0	0/0:31,0:31:72.23:0,72,1086	1/1:1,27:29:74.98:779,75,0	1/1:3,20:23:51.12:542,51,0	0/0:15,0:14:36.12:0,36,554	0/0:16,0:16:42.14:0,42,646	0/0:19,0:21:56.66:0,57,783	0/0:23,0:23:42.57:0,43,568	0/0:26,0:26:72.20:0,72,1082	0/0:24,0:25:65.70:0,66,958	1/1:3,15:16:36.07:381,36,0	0/0:4,2:30:11.29:0,11,282	0/0:4,0:29:62.90:0,63,252	0/0:1,0:10:22.46:0,22,77
chr10	4700714	.	T	TTTCCTTGTC	6339.51	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=4.912;DP=614;FS=9.736;HRun=0;HaplotypeScore=179.6688;InbreedingCoeff=0.9975;MQ=74.29;MQ0=2;MQRankSum=-11.107;QD=68.17;ReadPosRankSum=-2.163;VQSLOD=3.6953;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:28:31.73:0,32,955	0/0:10,0:10:24.08:0,24,677	0/0:29,0:22:42.13:0,42,1022	0/0:31,0:27:51.10:0,51,1300	0/0:16,0:16:33.10:0,33,877	0/0:15,0:15:39.13:0,39,1033	0/0:19,0:19:42.14:0,42,1078	0/0:22,0:22:48.16:0,48,1237	0/0:27,0:27:72.25:0,72,1971	0/0:16,0:16:30.10:0,30,784	0/0:12,0:12:33.06:0,33,825	0/0:26,0:26:69.24:0,69,1957	0/0:24,0:24:57.20:0,57,1569	0/0:18,0:18:45.14:0,45,1149	1/1:17,19:36:69.23:2901,69,0	0/0:19,0:19:51.18:0,51,1329	1/1:15,7:23:35.94:1427,36,0	1/1:10,10:20:27.09:1125,27,0	0/0:25,0:24:54.16:0,54,1282	0/0:16,0:16:42.13:0,42,1090	0/0:43,0:43:93.29:0,93,2451	0/0:17,0:17:36.11:0,36,962	0/0:18,0:18:37.40:0,37,1023	0/0:34,0:34:90.16:0,90,2403	1/1:8,4:13:21.07:887,21,0	0/0:24,0:24:54.19:0,54,1444	0/0:15,0:15:39.13:0,39,1132	0/0:15,0:15:45.15:0,45,1203
chr10	4700730	.	CGTGT	C	448.47	PASS	AB=0.971;AC=13;AF=0.271;AN=48;BaseQRankSum=2.035;DP=615;FS=8.170;HRun=0;HaplotypeScore=132.1161;InbreedingCoeff=0.3392;MQ=60.26;MQ0=15;MQRankSum=-1.223;QD=2.22;ReadPosRankSum=2.210;VQSLOD=1.8040;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/0:9,0:8:6.02:0,6,106	./.	./.	0/0:16,0:15:3.01:0,3,71	0/0:22,0:22:4.87:0,5,638	0/0:18,0:18:20.63:0,21,357	0/0:19,0:19:0.47:0,0,1	0/1:29,0:30:68.69:69,0,193	0/0:18,0:17:17.80:0,18,313	0/0:14,0:13:9.03:0,9,209	0/0:26,0:26:15.03:0,15,292	0/1:24,0:23:5.33:5,0,345	0/0:19,0:18:18.06:0,18,282	1/1:25,4:28:12.02:163,12,0	0/1:20,0:21:13.38:13,0,558	0/0:21,0:22:25.41:0,25,461	1/1:14,1:15:10.89:128,11,0	./.	0/0:15,0:15:9.03:0,9,211	0/0:46,0:45:28.91:0,29,412	0/0:18,0:19:17.83:0,18,236	0/0:18,1:18:2.74:0,3,12	0/1:34,3:39:26.41:26,0,113	1/1:9,3:10:9.03:139,9,0	0/0:24,0:23:3.01:0,3,54	1/1:16,0:16:5.35:38,5,0	0/1:15,0:15:2.50:14,0,2
chr10	4701921	.	G	GC	2641.87	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-4.265;DP=602;FS=2.993;HRun=8;HaplotypeScore=63.4873;InbreedingCoeff=0.9097;MQ=79.39;MQ0=0;MQRankSum=0.010;QD=16.51;ReadPosRankSum=0.851;VQSLOD=3.7890;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,16:21:39.12:450,39,0	0/0:9,0:9:24.01:0,24,220	0/0:14,0:15:13.28:0,13,207	0/0:15,0:15:31.35:0,31,287	0/0:26,0:26:62.97:0,63,566	0/0:22,0:22:57.02:0,57,522	0/0:22,0:22:60.03:0,60,549	1/1:5,0:12:14.62:91,15,0	0/0:26,0:26:65.99:0,66,594	0/0:38,0:38:99:0,108,983	0/0:16,0:16:45.02:0,45,412	0/0:28,0:28:72.03:0,72,659	0/0:22,0:23:59.03:0,59,518	0/0:25,0:25:63.03:0,63,576	1/1:2,24:26:66.15:747,66,0	0/0:15,0:15:39.01:0,39,353	1/1:2,4:23:34.26:193,34,0	1/1:0,25:25:66.20:760,66,0	0/0:21,0:21:47.85:0,48,431	0/0:17,0:18:44.02:0,44,381	0/0:49,0:49:99:0,129,1181	0/0:25,0:25:69.03:0,69,631	0/0:15,0:15:38.99:0,39,346	0/0:34,0:34:81.01:0,81,741	1/1:7,13:21:17.54:437,18,0	1/1:6,1:18:1.48:119,1,0	1/1:0,1:8:5.51:29,6,0	1/1:1,1:6:2.88:15,3,0
chr10	4703616	.	A	AAAAACAAAACAAAAC	15480.47	PASS	AB=0.760;AC=17;AF=0.304;AN=56;BaseQRankSum=4.676;DP=740;FS=0.000;HRun=0;HaplotypeScore=278.2752;InbreedingCoeff=0.8914;MQ=66.84;MQ0=5;MQRankSum=-12.469;QD=61.19;ReadPosRankSum=-4.707;VQSLOD=2.9839;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:29,4:35:45.15:2540,45,0	0/0:13,0:13:27.05:0,27,841	0/0:44,0:31:20.97:0,21,481	0/0:40,0:20:9.66:0,10,108	0/0:23,0:23:21.07:0,21,791	0/0:23,0:23:33.11:0,33,1295	0/0:25,0:25:51.13:0,51,1829	1/1:41,0:33:57.17:2350,57,0	0/0:26,0:26:45.14:0,45,1567	0/0:28,0:28:48.16:0,48,1731	0/0:16,0:16:39.13:0,39,1512	0/0:28,0:29:51.16:0,51,1938	0/0:30,0:30:57.18:0,57,2184	0/0:27,0:27:48.16:0,48,1804	1/1:23,0:34:39.13:1271,39,0	0/0:28,0:28:51.15:0,51,1801	1/1:27,4:31:30.10:1807,30,0	1/1:16,0:20:18.06:576,18,0	0/0:15,0:15:20.99:0,21,859	0/0:19,0:19:33.10:0,33,1271	0/0:22,0:22:30.10:0,30,1244	0/0:22,0:22:42.14:0,42,1582	0/0:36,0:36:69.20:0,69,2545	0/0:20,0:20:42.14:0,42,1618	1/1:15,0:20:15.05:502,15,0	0/1:26,11:38:52.19:4208,0,52	1/1:18,4:25:30.10:1591,30,0	1/1:4,3:8:9.03:635,9,0
chr10	4704706	.	T	TGCGCGC	1042.18	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=0.596;DP=566;FS=0.000;HRun=0;HaplotypeScore=136.5859;InbreedingCoeff=0.8383;MQ=69.29;MQ0=8;MQRankSum=-1.219;QD=6.99;ReadPosRankSum=-2.477;VQSLOD=1.2163;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:7,19:35:6.02:199,6,0	0/0:12,0:12:14.72:0,15,303	0/0:11,0:8:3.27:0,3,8	0/0:11,0:8:6:0,6,72	0/0:18,0:19:30.08:0,30,621	0/0:26,0:26:45.12:0,45,828	0/0:31,0:31:69.19:0,69,1285	1/1:25,0:24:16.16:174,16,0	0/0:18,0:17:39.13:0,39,782	0/0:23,0:23:51.09:0,51,1057	0/0:12,0:12:29.78:0,30,453	0/0:15,0:15:33.04:0,33,630	0/0:18,0:18:24.97:0,25,459	0/0:27,0:27:51.17:0,51,970	1/1:15,0:15:32.33:301,32,0	0/0:20,0:20:41.89:0,42,821	1/1:22,0:22:24.04:393,24,0	1/1:3,0:29:9.02:104,9,0	0/0:19,0:17:45.15:0,45,936	0/0:9,0:9:18.05:0,18,317	0/0:54,0:52:93.28:0,93,1898	0/0:16,0:16:27.08:0,27,485	0/0:14,0:14:23.67:0,24,382	0/0:30,0:30:36.20:0,36,1080	1/1:4,0:23:3.01:39,3,0	0/0:1,0:17:35.82:0,36,501	0/0:0,0:12:24.08:0,24,351	0/0:0,0:3:3.01:0,3,42
chr10	4704716	.	CGT	C	2224.06	PASS	AB=0.916;AC=36;AF=0.692;AN=52;BaseQRankSum=-1.909;DP=577;FS=1.409;HRun=0;HaplotypeScore=88.9468;InbreedingCoeff=0.1732;MQ=61.41;MQ0=14;MQRankSum=4.518;QD=4.51;ReadPosRankSum=3.652;VQSLOD=2.5007;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:32:12.74:35,0,13	1/1:6,3:9:2.78:32,3,0	./.	./.	1/1:15,1:16:17.68:127,18,0	1/1:14,11:26:22.82:201,23,0	1/1:16,14:32:29.65:290,30,0	0/0:32,0:29:36.84:0,37,247	1/1:9,8:16:15.04:165,15,0	0/1:24,0:23:19.44:19,0,318	0/1:13,2:15:38.57:55,0,39	1/1:17,3:19:23.82:196,24,0	1/1:7,6:14:11.65:113,12,0	1/1:12,10:23:26.86:264,27,0	0/1:18,0:18:22.25:22,0,90	1/1:9,8:18:17.63:178,18,0	1/1:22,0:22:2.90:17,3,0	0/1:30,0:30:38.86:39,0,90	1/1:20,0:18:8.65:79,9,0	1/1:7,3:10:3.01:33,3,0	1/1:37,23:57:11.76:127,12,0	0/1:10,6:17:10.08:98,0,10	0/1:9,4:14:4.14:117,0,4	1/1:17,10:30:20.18:170,20,0	0/1:24,0:23:11.71:12,0,49	0/0:20,0:20:27.40:0,27,175	0/0:14,0:14:12.16:0,12,63	0/0:3,0:3:1.55:0,2,4
chr10	4706692	.	G	GGC	820.37	PASS	AB=0.979;AC=21;AF=0.389;AN=54;BaseQRankSum=11.976;DP=409;FS=43.152;HRun=0;HaplotypeScore=156.9950;InbreedingCoeff=-0.0986;MQ=33.71;MQ0=47;MQRankSum=-5.772;QD=3.07;ReadPosRankSum=8.441;VQSLOD=0.5947;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:8:6.88:0,7,21	0/1:9,0:9:44.74:45,0,67	./.	0/0:25,0:3:3.85:0,4,22	1/1:20,0:18:10.94:119,11,0	0/1:14,0:13:28.91:56,0,29	0/1:27,0:21:45.81:46,0,344	0/0:7,0:4:7.75:0,8,34	0/1:9,0:7:8.83:9,0,115	0/1:10,6:13:76.42:76,0,175	0/1:18,0:18:7.62:64,0,8	0/0:8,0:7:3.80:0,4,49	0/1:13,0:9:47.38:47,0,73	0/0:10,0:8:17.73:0,18,240	1/1:5,0:4:2.92:19,3,0	0/1:9,0:6:10.43:10,0,56	0/0:17,0:13:11.36:0,11,217	0/0:11,0:3:5.97:0,6,83	0/0:9,0:8:24.08:0,24,333	0/1:16,0:15:25.89:77,0,26	0/0:14,0:11:8.99:0,9,108	1/1:16,0:15:32.36:166,32,0	0/1:19,0:18:56.83:57,0,68	0/0:17,0:16:10.90:0,11,381	1/1:19,0:17:22.15:127,22,0	0/1:30,0:26:7.35:7,0,538	0/1:10,0:10:17.89:18,0,169	0/1:17,0:14:43.26:43,0,161
chr10	4706694	.	GA	G	59.96	PASS	AC=2;AF=0.037;AN=54;BaseQRankSum=-0.477;DP=406;FS=5.240;HRun=1;HaplotypeScore=149.9971;InbreedingCoeff=0.4988;MQ=30.93;MQ0=47;MQRankSum=-1.001;QD=4.61;ReadPosRankSum=-0.881;VQSLOD=-0.0279;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,6:7:12.04:145,12,0	0/0:9,0:9:18.48:0,18,136	./.	0/0:22,0:2:4.25:0,4,32	0/0:20,0:18:27.58:0,28,178	0/0:14,0:12:7.69:0,8,31	0/0:27,0:21:39.34:0,39,387	0/0:7,0:4:4.74:0,5,13	0/0:9,0:7:11.25:0,11,123	0/0:16,0:13:32.53:0,33,326	0/0:17,0:17:20.90:0,21,144	0/0:9,0:8:6.02:0,6,76	0/0:13,0:9:15.19:0,15,117	0/0:8,0:6:12.41:0,12,152	0/0:6,0:4:2.35:0,2,11	0/0:11,0:6:11.26:0,11,97	0/0:17,0:13:20.64:0,21,225	0/0:11,0:3:6.91:0,7,78	0/0:10,0:9:26.99:0,27,273	0/0:15,0:14:24.64:0,25,182	0/0:14,0:11:12.04:0,12,151	0/0:16,0:15:31.04:0,31,232	0/0:20,0:19:27.66:0,28,226	0/0:18,0:17:31.03:0,31,339	0/0:19,0:17:24.58:0,25,103	0/0:31,0:27:73.79:0,74,766	0/0:10,0:10:20.08:0,20,231	0/0:17,0:14:27.80:0,28,252
chr10	4706751	.	AG	A	663.94	PASS	AB=0.904;AC=20;AF=0.357;AN=56;BaseQRankSum=6.832;DP=370;FS=5.417;HRun=4;HaplotypeScore=51.7748;InbreedingCoeff=-0.0678;MQ=34.76;MQ0=36;MQRankSum=-6.260;QD=3.69;ReadPosRankSum=-0.229;VQSLOD=-0.4602;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:20,2:19:18.43:18,0,131	0/1:7,3:9:66.13:93,0,66	0/0:41,0:4:8.71:0,9,87	0/0:55,0:7:8.98:0,9,101	0/0:7,8:14:11.72:0,12,164	0/1:14,0:10:38.55:39,0,144	0/0:8,1:8:14.29:0,14,206	0/0:8,0:5:2.88:0,3,41	0/0:11,0:10:12.02:0,12,165	0/1:13,0:13:86.22:86,0,114	1/1:6,0:5:1.80:5,2,0	0/1:5,0:5:7.86:8,0,111	0/0:2,0:2:3:0,3,39	0/1:9,0:9:6.80:7,0,114	1/1:3,1:3:5.10:23,5,0	0/0:4,0:4:5.44:0,5,58	0/1:10,1:7:27.14:27,0,62	0/1:5,0:1:0:0,0,0	0/1:8,0:5:8.07:8,0,132	0/0:16,0:16:14.17:0,14,281	0/0:12,0:9:15.05:0,15,210	0/1:18,5:23:59.32:121,0,59	0/1:10,2:11:16.07:16,0,36	0/0:12,0:11:0.67:0,1,192	1/1:25,2:24:18.90:113,19,0	0/1:2,7:8:17.69:227,0,18	1/1:2,0:2:2.97:25,3,0	0/0:5,0:5:2.60:0,3,10
chr10	4706755	.	GA	G	938.63	PASS	AB=0.804;AC=18;AF=0.333;AN=54;BaseQRankSum=5.972;DP=348;FS=10.653;HRun=1;HaplotypeScore=45.1974;InbreedingCoeff=-0.1646;MQ=31.51;MQ0=33;MQRankSum=-5.777;QD=5.39;ReadPosRankSum=1.865;VQSLOD=-0.4293;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:15,3:16:56.52:57,0,171	0/1:7,3:9:75.99:104,0,76	0/0:36,0:3:5.88:0,6,62	0/0:48,1:7:8.99:0,9,123	0/0:16,1:16:11.72:0,12,174	0/1:9,5:10:99:109,0,205	0/0:10,0:9:16.32:0,16,226	0/0:5,0:3:2.89:0,3,46	0/0:9,0:8:14.94:0,15,190	0/1:10,5:15:99:169,0,160	1/1:6,2:7:4.44:24,4,0	0/1:3,1:4:26.31:26,0,116	0/1:1,1:2:14.93:15,0,18	0/1:7,2:9:38.87:39,0,126	1/1:2,1:2:3.47:29,3,0	0/0:5,0:5:8.43:0,8,89	0/1:10,0:7:9.28:9,0,69	./.	0/0:8,0:5:11.41:0,11,178	0/0:14,2:16:10.12:0,10,289	0/0:9,0:6:15.05:0,15,234	0/1:15,9:24:97.19:198,0,97	0/1:6,4:9:35.91:36,0,41	0/1:10,3:12:15.01:15,0,175	1/1:14,11:23:5.71:183,6,0	0/1:9,0:8:23.75:81,0,24	0/0:2,0:2:4.07:0,4,12	0/0:3,0:3:2.81:0,3,18
chr10	4708786	.	CATGA	C	11619.15	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=16.237;DP=771;FS=3.882;HRun=0;HaplotypeScore=131.5439;InbreedingCoeff=0.9978;MQ=81.51;MQ0=0;MQRankSum=-7.753;QD=44.86;ReadPosRankSum=4.529;VQSLOD=5.0077;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,47:50:99:2456,131,0	0/0:14,0:14:42.13:0,42,1065	0/0:30,0:31:80.88:0,81,1809	0/0:20,0:20:51.15:0,51,1198	0/0:28,0:28:78.27:0,78,2074	0/0:24,0:24:66.23:0,66,1761	0/0:28,0:28:78.27:0,78,2050	1/1:5,17:22:51.15:885,51,0	0/0:24,0:24:66.23:0,66,1725	0/0:23,0:23:69.24:0,69,1807	0/0:15,0:15:39.13:0,39,1006	0/0:28,0:28:78.25:0,78,1992	0/0:26,0:26:72.25:0,72,1879	0/0:31,0:31:93.31:0,93,2403	1/1:0,12:12:30.10:560,30,0	0/0:28,0:28:84.28:0,84,2180	1/1:3,47:50:99:2015,108,0	1/1:1,27:28:72.25:1344,72,0	0/0:33,0:33:90.31:0,90,2370	0/0:27,0:27:78.25:0,78,1999	0/0:61,0:61:99:0,178,4604	0/0:16,0:16:42.13:0,42,1004	0/0:20,0:20:60.21:0,60,1565	0/0:35,0:35:99:0,99,2529	1/1:0,19:19:48.16:890,48,0	1/1:2,32:34:16.25:1622,16,0	1/1:1,26:27:72.25:1343,72,0	1/1:2,15:17:27.09:504,27,0
chr10	4710501	.	AGAACT	A	1437.94	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.361;DP=568;FS=8.485;HRun=0;HaplotypeScore=112.5813;InbreedingCoeff=0.9969;MQ=94.01;MQ0=0;MQRankSum=-8.017;QD=43.57;ReadPosRankSum=-0.872;VQSLOD=3.2058;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,33:33:69.24:1533,69,0	0/0:9,0:9:27.09:0,27,860	0/0:29,0:29:84.29:0,84,2343	0/0:25,0:25:68.04:0,68,1714	0/0:14,0:14:42.13:0,42,1271	0/0:16,0:16:48.16:0,48,1549	0/0:26,0:26:78.25:0,78,2396	0/0:28,0:28:84.29:0,84,2615	0/0:23,0:23:69.24:0,69,2090	0/0:13,0:13:39.13:0,39,1260	0/0:13,0:13:33.10:0,33,994	0/0:21,0:21:57.20:0,57,1801	0/0:16,0:16:45.15:0,45,1403	0/0:19,0:19:57.20:0,57,1808	0/0:21,0:21:63.20:0,63,1958	0/0:20,0:20:60.19:0,60,1790	0/0:25,0:24:75.26:0,75,2371	0/0:17,0:17:48.14:0,48,1463	0/0:26,0:26:75.24:0,75,2216	0/0:10,0:10:30.10:0,30,968	0/0:30,0:30:90.29:0,90,2794	0/0:14,0:14:42.14:0,42,1284	0/0:9,0:9:27.08:0,27,762	0/0:26,0:26:75.26:0,75,2349	0/0:13,0:13:36.12:0,36,1153	0/0:25,0:25:66.19:0,66,2039	0/0:28,0:28:81.28:0,81,2612	0/0:19,0:19:57.16:0,57,1764
chr10	4710791	.	C	CTTAT	346.92	PASS	AC=2;AF=0.037;AN=54;BaseQRankSum=2.765;DP=354;FS=3.295;HRun=0;HaplotypeScore=64.1337;InbreedingCoeff=0.4876;MQ=56.01;MQ0=0;MQRankSum=2.087;QD=11.96;ReadPosRankSum=0.645;VQSLOD=2.6234;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:33.92:0,34,341	0/0:3,0:3:9.03:0,9,142	./.	0/0:4,0:2:2.22:0,2,7	0/0:15,0:15:45.04:0,45,566	0/0:12,0:12:24.07:0,24,368	0/0:7,0:7:9.01:0,9,98	0/0:38,0:38:93.05:0,93,846	0/0:9,0:9:23.98:0,24,282	0/0:8,0:8:18.02:0,18,184	0/0:12,0:12:32.99:0,33,396	0/0:10,0:10:24.02:0,24,267	0/0:9,0:9:15.01:0,15,173	0/0:10,0:10:24.04:0,24,308	0/0:5,0:5:3.01:0,3,34	0/0:11,0:11:18.02:0,18,219	1/1:10,19:28:18.06:437,18,0	0/0:25,0:25:23.80:0,24,190	0/0:16,0:16:27.04:0,27,306	0/0:14,0:14:30.02:0,30,348	0/0:9,0:9:12.03:0,12,173	0/0:2,0:2:6.01:0,6,74	0/0:9,0:9:21.04:0,21,291	0/0:4,0:4:9.02:0,9,122	0/0:18,0:18:30.26:0,30,209	0/0:22,0:22:7.60:0,8,236	0/0:11,0:11:9.01:0,9,85	0/0:14,0:14:3:0,3,28
chr10	4710805	.	TATTTATTC	T	1425.99	PASS	AB=0.905;AC=9;AF=0.161;AN=56;BaseQRankSum=8.421;DP=366;FS=1.461;HRun=0;HaplotypeScore=82.0597;InbreedingCoeff=0.2128;MQ=56.47;MQ0=0;MQRankSum=-1.373;QD=12.08;ReadPosRankSum=3.229;VQSLOD=1.8765;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:28.53:0,29,296	0/0:3,0:3:9.03:0,9,281	0/0:5,0:1:2.92:0,3,17	0/0:6,0:2:2.37:0,2,8	0/0:19,0:19:57.05:0,57,1430	0/0:12,0:12:33.09:0,33,1043	0/0:5,0:5:12.03:0,12,204	0/0:44,0:44:99:0,126,1688	0/0:16,0:16:48.04:0,48,863	0/0:9,0:9:27.07:0,27,540	0/0:14,0:14:41.20:0,41,957	0/0:10,0:10:30.07:0,30,672	0/0:8,0:8:24.02:0,24,511	0/0:9,0:9:27.02:0,27,653	0/1:10,0:10:16.48:39,0,16	0/0:12,0:12:33.08:0,33,712	0/1:25,0:24:21.51:22,0,481	0/1:21,0:21:35.72:36,0,176	0/0:12,0:12:30.04:0,30,682	0/0:12,0:12:33.09:0,33,865	0/0:8,0:8:24.04:0,24,554	0/0:6,0:6:17.95:0,18,298	0/0:10,0:10:30.06:0,30,862	0/0:6,0:6:15.03:0,15,312	0/1:18,0:18:27.89:264,0,28	0/1:2,18:20:25.99:868,0,26	1/1:0,12:12:9.03:252,9,0	1/1:3,9:12:3.01:84,3,0
chr10	4710809	.	TATTCATTCATTC	T	1113.59	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=4.008;DP=374;FS=0.000;HRun=0;HaplotypeScore=110.1235;InbreedingCoeff=0.6904;MQ=58.39;MQ0=0;MQRankSum=-5.541;QD=21.42;ReadPosRankSum=3.540;VQSLOD=2.2103;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:23:27.09:0,27,688	0/0:3,0:3:9.03:0,9,451	0/0:5,0:1:3.01:0,3,55	0/0:6,0:2:2.60:0,3,10	0/0:20,0:20:45.15:0,45,2094	0/0:12,0:12:36.12:0,36,1640	0/0:4,0:4:6.02:0,6,253	0/0:46,0:46:87.27:0,87,2719	0/0:18,0:18:48.15:0,48,1687	0/0:11,0:11:30.10:0,30,1211	0/0:16,0:16:39.13:0,39,1633	0/0:11,0:11:30.10:0,30,1153	0/0:6,0:6:15.05:0,15,663	0/0:9,0:9:21.05:0,21,988	1/1:1,10:11:6.02:183,6,0	0/0:12,0:12:30.10:0,30,1236	0/0:24,0:23:30.06:0,30,989	1/1:10,12:22:6.02:212,6,0	0/0:11,0:11:27.08:0,27,1080	0/0:13,0:14:36.12:0,36,1485	0/0:8,0:8:12.04:0,12,639	0/0:6,0:6:18.06:0,18,602	0/0:10,0:10:27.09:0,27,1265	0/0:7,0:7:18.06:0,18,681	1/1:3,16:19:24.08:844,24,0	0/0:19,0:19:49.10:0,49,565	0/0:12,0:12:6.63:0,7,21	0/0:9,0:9:2.22:0,2,7
chr10	4711125	.	CTTG	C	2419.99	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.275;DP=658;FS=11.041;HRun=0;HaplotypeScore=91.6662;InbreedingCoeff=0.9983;MQ=83.73;MQ0=0;MQRankSum=-2.106;QD=40.33;ReadPosRankSum=3.315;VQSLOD=4.4580;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,126,2875	0/0:8,0:8:24.08:0,24,531	0/0:26,0:25:69.65:0,70,1378	0/0:23,0:23:66.20:0,66,1347	0/0:20,0:20:54.18:0,54,1213	0/0:21,0:21:57.20:0,57,1315	0/0:30,0:30:87.30:0,87,1984	0/0:31,0:31:90.30:0,90,2037	0/0:27,0:27:81.28:0,81,1868	0/0:20,0:20:57.20:0,57,1316	0/0:10,0:10:30.10:0,30,669	0/0:25,0:25:69.24:0,69,1565	0/0:22,0:22:66.23:0,66,1521	0/0:25,0:25:75.26:0,75,1729	1/1:2,26:27:69.19:1144,69,0	0/0:31,0:31:87.29:0,87,1964	0/0:32,0:32:96.31:0,96,2167	1/1:0,18:18:48.16:819,48,0	0/0:22,0:22:54.19:0,54,1227	0/0:15,0:15:42.14:0,42,954	0/0:45,0:45:99:0,132,2976	0/0:16,0:16:42.14:0,42,960	0/0:13,0:13:39.13:0,39,876	0/0:29,0:29:84.29:0,84,1934	1/1:0,14:14:36.12:600,36,0	0/0:21,0:21:54.19:0,54,1246	0/0:32,0:32:93.30:0,93,2100	0/0:8,0:8:24.08:0,24,553
chr10	4711295	.	CCTTTT	C	2475.45	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=7.609;DP=649;FS=1.187;HRun=0;HaplotypeScore=119.0111;InbreedingCoeff=0.9342;MQ=64.55;MQ0=8;MQRankSum=1.920;QD=30.56;ReadPosRankSum=4.630;VQSLOD=3.5284;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:66.22:0,66,1276	0/0:13,0:13:30.08:0,30,711	0/0:32,0:17:18.16:0,18,619	0/0:39,0:22:2.95:0,3,374	0/0:24,0:24:60.21:0,60,1621	0/0:28,0:28:66.23:0,66,1736	0/0:18,0:18:39.13:0,39,1072	0/0:36,0:35:50.19:0,50,615	0/0:15,0:15:30.09:0,30,766	0/0:23,0:23:63.22:0,63,1570	0/0:13,0:12:33.11:0,33,861	0/0:20,0:20:57.18:0,57,1566	0/0:21,0:21:54.17:0,54,1442	0/0:17,0:17:42.14:0,42,1196	1/1:5,23:28:36.12:683,36,0	0/0:21,0:21:45.14:0,45,1171	0/0:23,0:23:54.16:0,54,1312	1/1:4,22:25:45.15:854,45,0	0/0:19,0:18:30.08:0,30,721	0/0:23,0:23:57.20:0,57,1492	0/0:16,0:16:30.10:0,30,823	0/0:24,0:24:66.20:0,66,1693	0/0:19,0:19:39.13:0,39,1129	0/0:26,0:26:60.21:0,60,1656	1/1:1,26:27:57.20:1081,57,0	0/0:33,0:33:81.28:0,81,2067	0/0:23,0:23:48.16:0,48,1274	0/0:13,0:13:18.06:0,18,520
chr10	4714567	.	T	TGCA	1224.19	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-3.057;DP=637;FS=0.000;HRun=0;HaplotypeScore=109.2579;InbreedingCoeff=0.9922;MQ=87.28;MQ0=0;MQRankSum=-4.893;QD=37.10;ReadPosRankSum=-0.393;VQSLOD=3.8529;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,24:33:63.22:1319,63,0	0/0:8,0:8:24.08:0,24,369	0/0:30,0:30:66.21:0,66,994	0/0:28,0:26:43.21:0,43,907	0/0:15,0:15:27.09:0,27,418	0/0:17,0:17:39.13:0,39,604	0/0:26,0:26:75.25:0,75,1161	0/0:24,0:24:66.22:0,66,1001	0/0:17,0:17:48.15:0,48,716	0/0:29,0:29:72.24:0,72,1114	0/0:13,0:13:36.11:0,36,534	0/0:17,0:17:45.15:0,45,696	0/0:21,0:21:60.18:0,60,881	0/0:21,0:21:60.20:0,60,929	0/0:23,0:23:60.18:0,60,875	0/0:25,0:25:60.20:0,60,928	0/0:17,0:17:42.61:0,43,650	0/0:16,0:16:33.11:0,33,510	0/0:22,0:22:54.11:0,54,780	0/0:19,0:19:33.11:0,33,510	0/0:53,0:53:99:0,135,2031	0/0:17,0:17:48.15:0,48,719	0/0:24,0:24:63.20:0,63,949	0/0:43,0:43:99:0,117,1813	0/0:29,0:29:75.25:0,75,1157	0/0:22,0:22:42.14:0,42,643	0/0:19,0:19:44.65:0,45,687	0/0:9,0:9:21.07:0,21,323
chr10	4714595	.	AAC	A	1000.31	PASS	AB=0.929;AC=20;AF=0.370;AN=54;BaseQRankSum=4.375;DP=623;FS=2.751;HRun=0;HaplotypeScore=104.4901;InbreedingCoeff=-0.1521;MQ=67.83;MQ0=12;MQRankSum=0.463;QD=2.52;ReadPosRankSum=2.221;VQSLOD=1.9672;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:31:32.93:0,33,302	0/1:8,2:10:21.95:22,0,121	0/0:29,0:20:1.72:0,2,4	0/0:34,0:22:6.02:0,6,87	0/1:11,2:13:39.54:40,0,267	0/1:17,0:18:28.09:28,0,351	0/1:30,4:33:99:144,0,319	0/0:18,0:18:17.85:0,18,140	0/0:16,0:16:26.59:0,27,433	0/1:19,1:20:12.01:12,0,199	0/1:13,1:14:24.04:24,0,62	0/0:15,0:15:18.06:0,18,267	0/1:15,3:18:99:104,0,196	0/1:22,0:22:29.03:29,0,393	1/1:7,7:18:20.29:155,20,0	0/1:27,1:29:37.30:37,0,424	0/0:17,0:24:8.64:0,9,57	1/1:10,8:17:17.78:198,18,0	0/1:15,0:15:17.94:18,0,146	0/1:15,1:16:18.01:18,0,164	0/1:52,5:56:30.30:30,0,674	0/0:14,0:14:3.01:0,3,45	0/1:19,1:20:8.98:9,0,288	0/1:41,2:45:54.33:54,0,522	1/1:16,12:29:23.90:245,24,0	0/0:16,0:17:32.91:0,33,320	0/0:20,0:23:18.18:0,18,153	./.
chr10	4714649	.	CGTTTGTGCCTGTCACTGGGCTG	C	3916.80	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=7.968;DP=653;FS=2.832;HRun=0;HaplotypeScore=361.2768;InbreedingCoeff=0.9769;MQ=78.54;MQ0=2;MQRankSum=-7.207;QD=135.06;ReadPosRankSum=2.981;VQSLOD=2.5318;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,132,12778	0/0:9,0:9:27.09:0,27,2533	0/0:26,0:19:50.76:0,51,2993	0/0:33,0:25:46.85:0,47,4608	0/0:17,0:17:51.18:0,51,4760	0/0:27,0:27:75.26:0,75,6895	0/0:35,0:35:99:0,99,9277	0/0:15,0:15:42.14:0,42,3455	0/0:27,0:27:78.27:0,78,7323	0/0:22,0:22:66.23:0,66,6552	0/0:11,0:11:33.11:0,33,3256	0/0:23,0:23:63.22:0,63,6050	0/0:20,0:20:60.21:0,60,5805	0/0:26,0:26:78.27:0,78,6707	0/0:27,0:27:69.16:0,69,5884	0/0:21,0:21:63.17:0,63,5004	0/0:28,0:28:66.23:0,66,6323	0/0:21,0:21:53.54:0,54,4968	0/0:21,0:21:60.21:0,60,4568	0/0:18,0:18:48.16:0,48,4209	0/0:57,0:57:99:0,166,15426	0/0:16,0:16:45.15:0,45,4367	0/0:15,0:15:45.15:0,45,4427	0/0:43,0:43:99:0,126,11826	0/0:19,0:19:42.14:0,42,4017	1/1:4,12:16:36.12:2205,36,0	1/1:3,7:10:21.07:1199,21,0	1/1:0,3:3:9.03:513,9,0
chr10	4715303	.	G	GAAACTC	7735.78	PASS	AB=0.600;AC=14;AF=0.250;AN=56;BaseQRankSum=10.495;DP=608;FS=2.740;HRun=0;HaplotypeScore=130.1498;InbreedingCoeff=0.8034;MQ=51.83;MQ0=9;MQRankSum=-12.666;QD=69.07;ReadPosRankSum=1.585;VQSLOD=5.4016;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:54.84:0,55,2846	0/0:5,0:5:15.04:0,15,326	0/0:24,0:15:41.44:0,41,831	0/0:34,0:22:66.07:0,66,1348	0/0:16,0:16:48.15:0,48,1159	0/0:17,0:17:48.15:0,48,1145	0/0:21,0:21:44.67:0,45,1505	0/1:13,11:24:99:1161,0,396	0/0:32,0:32:96.32:0,96,2400	0/0:29,0:29:87.28:0,87,2062	0/0:14,0:14:39.12:0,39,921	0/0:23,0:23:69.21:0,69,1658	0/0:23,0:23:66.16:0,66,1482	0/0:32,0:32:93.32:0,93,2382	1/1:2,16:14:27.09:897,27,0	0/0:24,0:24:72.25:0,72,1835	1/1:0,9:10:21.07:592,21,0	1/1:0,6:7:18.06:623,18,0	0/0:25,0:21:57.18:0,57,1360	0/0:16,0:16:42.14:0,42,1060	0/0:59,0:59:99:0,171,3923	0/0:13,0:13:39.12:0,39,949	0/0:12,0:12:33.10:0,33,780	0/0:32,0:32:93.24:0,93,2316	1/1:0,14:13:30.10:1045,30,0	0/1:1,16:16:28.42:1328,0,28	1/1:0,13:14:36.12:1323,36,0	1/1:0,7:7:21.07:767,21,0
chr10	4715411	.	GT	G	7394.75	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=15.274;DP=591;FS=0.000;HRun=3;HaplotypeScore=72.5283;InbreedingCoeff=0.9727;MQ=87.91;MQ0=0;MQRankSum=-4.264;QD=35.21;ReadPosRankSum=1.865;VQSLOD=5.4326;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,45:45:99:1694,132,0	0/0:10,0:10:27.09:0,27,405	0/0:30,0:30:84.21:0,84,1141	0/0:18,0:18:36.11:0,36,557	0/0:27,0:27:78.25:0,78,1146	0/0:14,0:14:42.14:0,42,626	0/0:34,0:34:99:0,102,1505	1/1:2,26:28:75.23:959,75,0	0/0:20,0:20:60.19:0,60,874	0/0:22,0:22:63.21:0,63,943	0/0:16,0:16:48.16:0,48,719	0/0:11,0:11:33.10:0,33,475	0/0:18,0:18:54.15:0,54,763	0/0:17,0:17:51.17:0,51,762	1/1:0,20:20:48.11:604,48,0	0/0:18,0:18:51.17:0,51,764	1/1:0,31:31:90.29:1168,90,0	1/1:0,27:27:69.22:895,69,0	0/0:21,0:21:63.20:0,63,910	0/0:19,0:19:57.19:0,57,847	0/0:33,0:33:99:0,99,1479	0/0:9,0:9:27.09:0,27,405	0/0:13,0:13:39.13:0,39,584	0/0:31,0:31:93.32:0,93,1394	1/1:0,11:11:33.11:428,33,0	1/1:1,15:16:3.18:539,3,0	1/1:1,14:15:42.03:522,42,0	1/1:0,17:17:45.15:584,45,0
chr10	4715545	.	GT	G	3595.82	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=11.933;DP=643;FS=1.246;HRun=5;HaplotypeScore=76.1238;InbreedingCoeff=0.9863;MQ=77.14;MQ0=0;MQRankSum=-1.633;QD=27.04;ReadPosRankSum=0.426;VQSLOD=3.6109;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,123,1649	0/0:3,0:3:9.03:0,9,123	0/0:18,0:17:26.59:0,27,418	0/0:14,0:14:34.77:0,35,393	0/0:19,0:19:54.17:0,54,722	0/0:27,0:27:75.23:0,75,995	0/0:32,0:32:96.28:0,96,1261	1/1:4,29:33:87.20:956,87,0	0/0:29,0:29:78.21:0,78,1015	0/0:33,0:33:96.04:0,96,1215	0/0:15,0:15:45.15:0,45,615	0/0:27,0:27:81.24:0,81,1070	0/0:19,0:19:57.19:0,57,779	0/0:17,0:17:51.17:0,51,696	1/1:1,20:21:48.14:544,48,0	0/0:15,0:15:45.14:0,45,599	1/1:0,25:25:60.17:680,60,0	1/1:1,27:28:63.18:715,63,0	0/0:28,0:28:78.12:0,78,998	0/0:30,0:30:84.23:0,84,1112	0/0:24,0:24:72.10:0,72,959	0/0:22,0:22:63.21:0,63,860	0/0:16,0:16:45.15:0,45,612	0/0:25,0:25:72.24:0,72,985	1/1:0,26:26:63.14:700,63,0	0/0:26,0:26:75.21:0,75,979	0/0:14,0:14:42.08:0,42,523	0/0:14,0:14:42.14:0,42,574
chr10	4715913	.	AGC	A	1937.08	PASS	AB=0.961;AC=17;AF=0.304;AN=56;BaseQRankSum=9.271;DP=682;FS=22.612;HRun=0;HaplotypeScore=116.2096;InbreedingCoeff=0.7339;MQ=58.85;MQ0=18;MQRankSum=-5.205;QD=9.73;ReadPosRankSum=1.060;VQSLOD=1.6948;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:61.93:0,62,497	0/0:8,0:8:7.14:0,7,190	0/0:38,0:11:25.03:0,25,231	0/0:58,0:23:24.75:0,25,254	0/0:31,0:31:65.82:0,66,835	0/0:12,0:11:20.93:0,21,360	0/0:25,0:25:28.47:0,28,614	1/1:15,8:23:56.32:469,56,0	0/0:22,0:22:16.13:0,16,551	0/1:27,1:28:7.09:7,0,466	0/0:14,0:14:32.79:0,33,346	0/0:24,0:24:46.61:0,47,868	0/0:27,0:25:8.83:0,9,541	0/0:24,1:24:32.70:0,33,430	0/1:20,2:20:41.71:82,0,42	0/0:24,0:24:50.57:0,51,916	1/1:18,0:18:20.37:173,20,0	1/1:9,1:10:23.05:190,23,0	0/0:23,0:20:43.85:0,44,441	0/0:27,0:27:48.68:0,49,841	0/1:34,0:33:4.48:4,0,835	0/0:33,0:33:25.05:0,25,600	0/0:18,0:18:24.27:0,24,449	0/0:43,0:42:34.97:0,35,1058	1/1:18,0:18:30.46:260,30,0	1/1:16,6:21:58.98:515,59,0	1/1:12,10:21:46.55:388,47,0	1/1:2,0:2:5.95:44,6,0
chr10	4715915	.	CGA	C	838.10	PASS	AB=0.901;AC=21;AF=0.404;AN=52;BaseQRankSum=6.233;DP=699;FS=3.277;HRun=0;HaplotypeScore=120.9107;InbreedingCoeff=-0.2683;MQ=57.82;MQ0=24;MQRankSum=0.190;QD=2.00;ReadPosRankSum=2.446;VQSLOD=2.0269;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:31:16.73:0,17,88	0/1:8,1:9:22.35:22,0,85	./.	0/0:58,0:23:0.89:0,1,2	0/0:29,2:31:38.20:0,38,496	0/1:13,1:13:12.70:13,0,216	0/1:23,3:24:70.46:70,0,285	0/0:26,0:24:11.39:0,11,65	0/1:19,3:22:97.64:98,0,438	0/1:25,3:28:99:121,0,257	0/0:14,0:14:6.53:0,7,198	0/1:24,1:25:6.79:7,0,612	0/1:24,2:24:52.80:53,0,344	0/1:21,1:24:48.95:49,0,144	0/0:24,0:21:4.51:0,5,65	0/0:23,2:25:17.61:0,18,647	0/1:18,0:18:36.93:38,0,37	0/1:10,0:10:8.74:9,0,25	0/1:20,1:20:34.22:34,0,176	0/0:29,0:29:35.11:0,35,534	0/1:30,4:33:93.08:93,0,491	0/1:21,9:32:84.47:84,0,218	0/1:16,4:20:12.50:12,0,217	0/1:41,3:43:99:106,0,604	1/1:19,0:19:0.22:1,0,0	1/1:22,0:21:14.29:81,14,0	1/1:21,0:20:18.35:100,18,0	./.
chr10	4715926	.	G	GAA	590.52	PASS	AB=1.000;AC=4;AF=0.074;AN=54;BaseQRankSum=5.255;DP=744;FS=3.367;HRun=1;HaplotypeScore=127.5121;InbreedingCoeff=0.5186;MQ=50.23;MQ0=41;MQRankSum=-2.055;QD=6.79;ReadPosRankSum=-1.590;VQSLOD=-0.2943;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,11:27:63.51:683,64,0	0/0:12,0:12:21.66:0,22,201	0/0:34,0:7:11.77:0,12,84	0/0:51,0:16:28.09:0,28,213	0/0:27,0:27:54.07:0,54,668	0/0:17,0:16:29.62:0,30,336	0/0:29,0:26:53.82:0,54,584	0/0:33,0:26:62.06:0,62,445	0/0:25,0:25:66.04:0,66,762	0/0:31,0:30:64.21:0,64,726	0/0:17,0:17:29.91:0,30,351	0/0:25,0:25:60.13:0,60,805	0/0:29,0:26:51.19:0,51,611	0/0:27,0:26:41.43:0,41,405	0/1:34,0:30:4.70:5,0,92	0/0:27,0:27:62.89:0,63,824	0/1:23,0:21:5.84:6,0,155	0/0:11,0:11:25.88:0,26,174	0/0:27,0:22:55.51:0,56,544	0/0:31,0:31:63.43:0,63,775	0/0:41,0:36:72.32:0,72,870	0/0:29,0:29:56.93:0,57,562	0/0:21,0:21:39.01:0,39,425	0/0:47,0:45:97.29:0,97,1077	0/0:23,0:21:18.42:0,18,146	0/0:19,0:18:48.29:0,48,340	0/0:21,0:18:41.69:0,42,306	./.
chr10	4715946	.	G	GAC	720.20	PASS	AB=0.976;AC=10;AF=0.192;AN=52;BaseQRankSum=7.873;DP=735;FS=1.616;HRun=0;HaplotypeScore=140.5539;InbreedingCoeff=0.2799;MQ=43.82;MQ0=53;MQRankSum=-6.923;QD=2.96;ReadPosRankSum=-0.968;VQSLOD=2.5487;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:28:20.78:21,0,27	0/0:10,0:10:20.89:0,21,186	./.	0/0:19,0:5:1.82:0,2,5	0/0:24,0:24:23.12:0,23,570	0/0:22,0:19:23.78:0,24,286	0/0:25,0:21:22.10:0,22,384	0/1:43,0:29:99:159,0,114	0/0:30,0:29:71.80:0,72,796	0/0:37,0:35:52.73:0,53,686	0/0:19,0:19:30.03:0,30,351	0/0:33,0:31:78.07:0,78,946	0/1:32,1:26:1.38:1,0,514	0/0:27,0:25:39.93:0,40,369	0/1:32,0:28:6.39:6,0,74	0/0:31,0:30:74.80:0,75,910	0/1:27,4:26:49.29:199,0,49	0/0:16,0:15:13.82:0,14,93	0/1:29,0:23:7.57:8,0,293	0/0:33,0:32:33.85:0,34,670	0/0:41,0:32:65.97:0,66,732	0/0:28,0:28:42.63:0,43,435	0/0:21,0:21:32.92:0,33,364	0/0:47,0:44:6.42:0,6,935	0/0:22,0:20:9.44:0,9,73	1/1:22,0:20:46.07:309,46,0	1/1:20,0:14:32.06:162,32,0	./.
chr10	4715954	.	GAGAC	G	171.25	PASS	AB=0.973;AC=6;AF=0.120;AN=50;BaseQRankSum=7.888;DP=702;FS=2.649;HRun=0;HaplotypeScore=160.2344;InbreedingCoeff=0.0395;MQ=43.75;MQ0=55;MQRankSum=-4.689;QD=1.40;ReadPosRankSum=0.219;VQSLOD=2.8900;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:29,4:25:87.96:88,0,110	0/0:8,0:8:15.51:0,16,344	./.	./.	0/0:20,0:20:36.12:0,36,699	0/0:21,0:19:20.28:0,20,368	0/0:30,0:26:35.76:0,36,760	0/0:45,0:31:68.18:0,68,1065	0/0:30,0:28:66.65:0,67,1395	0/0:32,0:30:87.01:0,87,1634	0/0:19,0:19:24.08:0,24,549	0/0:33,0:31:76.09:0,76,1528	0/0:36,0:29:64.32:0,64,1209	0/0:28,0:26:39.24:0,39,802	0/1:32,0:28:31.48:31,0,94	0/0:31,0:30:74.85:0,75,1538	0/0:30,0:25:3.96:0,4,325	0/0:14,0:13:0.57:0,1,184	0/0:34,0:24:71.90:0,72,1175	0/0:32,0:31:60.18:0,60,1220	0/0:36,0:27:58.71:0,59,1104	0/0:28,0:27:42.13:0,42,873	0/0:25,0:24:36.09:0,36,601	0/0:46,0:43:97.92:0,98,1993	1/1:17,0:15:1.55:4,2,0	0/1:22,0:20:45.24:45,0,490	0/1:18,0:12:99:112,0,127	./.
chr10	4715962	.	GAC	G	270.48	PASS	AB=0.810;AC=3;AF=0.060;AN=50;BaseQRankSum=7.998;DP=680;FS=5.522;HRun=0;HaplotypeScore=130.3931;InbreedingCoeff=0.1007;MQ=43.31;MQ0=55;MQRankSum=-6.799;QD=4.75;ReadPosRankSum=-0.934;VQSLOD=2.4623;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:19:4.03:0,4,112	0/0:13,0:13:30.05:0,30,535	./.	./.	0/0:19,0:19:35.85:0,36,537	0/0:21,0:19:21.04:0,21,325	0/0:30,0:24:40.37:0,40,743	0/0:42,0:28:54.80:0,55,990	0/0:30,0:28:69.69:0,70,1260	0/0:34,0:31:93.23:0,93,1523	0/0:18,0:18:27.09:0,27,508	0/0:35,0:33:68.21:0,68,1252	0/0:31,0:25:54.08:0,54,978	0/0:25,0:23:32.68:0,33,633	0/0:30,0:26:8.23:0,8,92	0/0:27,0:26:68.56:0,69,1224	0/0:28,0:23:10.41:0,10,255	0/0:13,0:12:1.30:0,1,214	0/0:31,0:22:65.73:0,66,1072	0/0:31,0:30:60.21:0,60,1137	0/0:36,0:26:50.03:0,50,835	0/0:29,0:28:42.14:0,42,785	0/0:22,0:21:27.08:0,27,466	0/0:49,0:47:99:0,110,1913	0/1:17,0:15:0:0,0,0	0/1:16,6:20:99:143,0,378	0/1:8,10:12:47.97:215,0,48	./.
chr10	4715970	.	CAG	C	116.28	PASS	AB=0.969;AC=6;AF=0.120;AN=50;BaseQRankSum=6.771;DP=655;FS=0.000;HRun=0;HaplotypeScore=118.4695;InbreedingCoeff=0.0585;MQ=43.55;MQ0=49;MQRankSum=-6.384;QD=1.37;ReadPosRankSum=-1.836;VQSLOD=1.9530;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,2:19:8.05:0,8,63	0/0:15,0:15:33.10:0,33,551	./.	./.	0/0:17,0:17:24.08:0,24,417	0/0:23,0:21:24.06:0,24,381	0/0:27,0:22:35.59:0,36,586	0/0:35,0:24:18.69:0,19,585	0/0:32,0:30:71.21:0,71,1124	0/0:36,0:33:90.16:0,90,1414	0/0:16,0:16:30.09:0,30,495	0/0:33,0:31:58.06:0,58,1130	0/0:29,0:24:54.15:0,54,929	0/0:25,0:23:36.29:0,36,606	0/0:26,0:22:2.75:0,3,51	0/0:23,0:22:54.18:0,54,942	0/1:24,4:22:75.47:116,0,75	0/1:14,0:12:0.76:1,0,146	0/0:30,0:21:51.16:0,51,848	0/0:28,0:27:60.19:0,60,1015	0/0:39,0:27:47.28:0,47,737	0/0:28,0:27:42.12:0,42,674	0/0:17,0:16:24.08:0,24,419	0/0:47,0:46:99:0,102,1709	./.	0/1:21,0:19:66.65:67,0,138	0/1:18,0:12:30.80:31,0,165	1/1:4,0:2:0.87:2,1,0
chr10	4715990	.	CAG	C	376.61	PASS	AB=0.941;AC=5;AF=0.100;AN=50;BaseQRankSum=6.859;DP=634;FS=8.758;HRun=0;HaplotypeScore=121.3713;InbreedingCoeff=0.0243;MQ=44.83;MQ0=49;MQRankSum=-7.267;QD=2.85;ReadPosRankSum=-1.301;VQSLOD=1.8839;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:27:21.11:0,21,144	0/0:17,0:17:44.82:0,45,759	./.	./.	0/0:21,0:21:48.11:0,48,769	0/0:18,0:16:36.12:0,36,619	0/0:30,0:26:50.80:0,51,914	0/1:22,11:20:99:318,0,170	0/0:30,0:27:66.65:0,67,1128	0/0:31,0:29:58.20:0,58,1323	0/0:10,0:10:24.08:0,24,439	0/0:23,0:21:37:0,37,884	0/0:30,0:25:60.19:0,60,1039	0/0:29,0:26:51.63:0,52,887	0/1:28,0:25:0.02:0,0,0	0/0:25,0:24:66.14:0,66,1053	0/1:28,0:20:36.05:36,0,154	0/0:14,0:12:17.59:0,18,238	0/0:20,0:18:50.83:0,51,821	0/0:28,0:27:63.20:0,63,1107	0/0:43,0:32:65.69:0,66,1010	0/0:19,0:18:39.13:0,39,707	0/0:17,0:16:27.08:0,27,465	0/0:47,0:45:99:0,99,1743	./.	0/1:21,0:19:62.85:63,0,187	0/1:21,1:16:65.91:66,0,159	0/0:6,0:4:4.67:0,5,20
chr10	4715996	.	CAG	C	175.84	PASS	AB=0.870;AC=7;AF=0.135;AN=52;BaseQRankSum=6.618;DP=624;FS=0.910;HRun=0;HaplotypeScore=118.4367;InbreedingCoeff=0.4308;MQ=45.30;MQ0=48;MQRankSum=-3.702;QD=2.00;ReadPosRankSum=-3.310;VQSLOD=1.6171;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:21,15:29:91.04:236,0,91	0/0:17,0:17:41.90:0,42,715	./.	./.	0/0:21,0:21:48.16:0,48,848	0/0:18,0:16:33.11:0,33,575	0/0:30,0:26:54.71:0,55,946	0/0:33,0:18:12.80:0,13,102	0/0:30,0:27:63.27:0,63,1040	0/0:30,0:27:80.92:0,81,1296	0/0:11,0:11:33.11:0,33,560	0/0:24,0:22:44.99:0,45,876	0/0:26,1:22:54.05:0,54,906	0/0:27,0:25:51.65:0,52,890	0/0:27,0:23:0.45:0,0,1	0/0:23,0:22:54.14:0,54,896	0/0:29,0:21:11.27:0,11,129	0/0:14,0:12:16.10:0,16,139	0/0:20,0:18:52.79:0,53,680	0/0:26,0:26:63.22:0,63,1101	0/0:46,0:35:61.51:0,62,1061	0/0:19,0:19:39.13:0,39,686	0/0:18,0:17:30.10:0,30,526	0/0:46,0:44:96.18:0,96,1631	1/1:11,0:9:0.47:1,0,0	0/1:16,0:14:0.24:0,0,73	0/1:17,2:13:0.36:19,0,0	1/1:3,3:4:0.72:17,1,0
chr10	4716004	.	C	CAG	555.80	PASS	AB=1.000;AC=10;AF=0.192;AN=52;BaseQRankSum=9.415;DP=607;FS=27.110;HRun=0;HaplotypeScore=116.7344;InbreedingCoeff=0.6130;MQ=46.60;MQ0=43;MQRankSum=-9.280;QD=4.63;ReadPosRankSum=-1.764;VQSLOD=1.0593;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:29:36.02:0,36,422	0/0:16,0:16:25.64:0,26,539	./.	./.	0/0:21,0:21:53.97:0,54,690	0/0:17,0:15:39.13:0,39,519	0/0:32,0:29:69.18:0,69,896	0/1:28,0:13:0.72:1,0,29	0/0:29,0:26:57.19:0,57,752	0/0:30,0:28:72.19:0,72,917	0/0:13,0:13:33.11:0,33,438	0/0:26,0:24:47.43:0,47,715	0/0:27,0:22:51.15:0,51,662	0/0:25,0:23:51.17:0,51,677	0/0:12,0:21:4.78:0,5,18	0/0:21,0:20:52.72:0,53,682	0/1:30,0:22:24.43:24,0,32	0/1:10,0:11:7.10:7,0,39	0/0:22,0:21:57.11:0,57,702	0/0:26,0:26:60.20:0,60,798	0/0:44,0:34:74.90:0,75,936	0/0:17,0:17:39.13:0,39,519	0/0:17,0:16:30.08:0,30,383	0/0:43,0:41:89.72:0,90,1139	0/1:10,0:9:0:0,0,0	1/1:8,6:13:31.93:320,32,0	1/1:11,8:13:33.68:258,34,0	1/1:4,1:4:11.59:90,12,0
chr10	4716008	.	GAGAC	G	672.23	PASS	AB=0.928;AC=12;AF=0.231;AN=52;BaseQRankSum=9.293;DP=611;FS=16.292;HRun=0;HaplotypeScore=137.0104;InbreedingCoeff=0.5156;MQ=47.22;MQ0=42;MQRankSum=-8.188;QD=4.70;ReadPosRankSum=-1.982;VQSLOD=1.4745;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:31:16.63:0,17,418	0/0:17,0:17:29.15:0,29,1110	./.	./.	0/0:21,0:21:57.18:0,57,1344	0/0:19,0:17:42.14:0,42,1022	0/0:33,0:30:76.94:0,77,1722	1/1:18,7:10:21.07:397,21,0	0/0:29,0:26:63.62:0,64,1419	0/0:29,0:27:78.26:0,78,1639	0/0:13,0:13:36.12:0,36,914	0/0:26,0:24:62.95:0,63,1423	0/0:27,0:22:57.16:0,57,1278	0/0:21,0:20:51.65:0,52,1292	1/1:24,1:22:6.01:30,6,0	0/0:22,0:21:46.22:0,46,1406	0/1:15,11:19:61.26:171,0,61	0/1:11,0:9:64.42:64,0,87	0/0:23,0:22:63.12:0,63,1293	0/0:26,0:26:66.23:0,66,1629	0/0:46,0:36:80.98:0,81,1853	0/0:17,0:17:42.14:0,42,1041	0/0:19,0:18:39.12:0,39,909	0/0:42,0:40:93.16:0,93,2235	1/1:11,2:11:0.36:1,0,0	0/1:16,0:16:47.59:48,0,98	0/1:19,0:13:1.35:74,0,1	1/1:5,0:4:9.05:36,9,0
chr10	4716020	.	CAG	C	339.41	PASS	AB=0.893;AC=11;AF=0.196;AN=56;BaseQRankSum=9.677;DP=602;FS=8.029;HRun=0;HaplotypeScore=114.9585;InbreedingCoeff=0.5029;MQ=48.17;MQ0=29;MQRankSum=-7.228;QD=3.09;ReadPosRankSum=-1.571;VQSLOD=1.7741;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:33:34.61:0,35,576	0/0:17,0:17:45.15:0,45,792	0/0:7,0:2:6.02:0,6,74	0/0:10,0:3:8.92:0,9,76	0/0:20,0:20:51.17:0,51,898	0/0:19,0:18:42.14:0,42,733	0/0:33,0:30:78.22:0,78,1272	0/0:26,0:14:6.56:0,7,111	0/0:25,0:23:60.68:0,61,1022	0/0:24,0:22:60.16:0,60,977	0/0:14,0:14:42.14:0,42,728	0/0:23,0:21:60.09:0,60,986	0/0:23,2:21:15.84:0,16,869	0/0:23,0:22:60.66:0,61,1032	1/1:9,14:20:5.80:34,6,0	0/0:23,0:22:63.16:0,63,993	0/1:26,0:18:40.43:62,0,40	0/1:9,1:8:33.56:34,0,57	0/0:25,0:22:57.01:0,57,839	0/0:24,0:24:63.20:0,63,1077	0/0:39,0:34:77.82:0,78,1344	0/0:19,0:19:42.14:0,42,734	0/0:20,0:20:51.13:0,51,803	0/0:38,1:38:93.21:0,93,1589	1/1:2,6:8:0.36:1,0,0	0/1:14,6:20:54.10:171,0,54	1/1:11,8:17:19.04:135,19,0	1/1:3,1:4:9.87:50,10,0
chr10	4716034	.	C	CAG	2527.49	PASS	AB=0.718;AC=13;AF=0.232;AN=56;BaseQRankSum=11.510;DP=634;FS=12.850;HRun=0;HaplotypeScore=121.2110;InbreedingCoeff=0.6729;MQ=48.59;MQ0=13;MQRankSum=-9.255;QD=18.86;ReadPosRankSum=-1.375;VQSLOD=3.1998;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,2:38:38.99:0,39,535	0/0:15,0:15:45.15:0,45,644	0/0:25,0:10:19.08:0,19,274	0/0:25,0:10:24.05:0,24,271	0/0:19,0:19:54.18:0,54,769	0/0:22,0:21:45.15:0,45,644	0/0:26,0:24:66.22:0,66,942	1/1:15,11:21:47.95:692,48,0	0/0:26,0:24:54.17:0,54,754	0/0:23,0:22:63.20:0,63,882	0/0:16,0:15:36.12:0,36,498	0/0:21,0:20:51.15:0,51,708	0/0:25,0:22:54.09:0,54,769	0/0:22,0:21:57.19:0,57,813	1/1:12,11:21:6:79,6,0	0/0:23,0:23:63.19:0,63,878	0/1:7,14:17:9.36:270,0,9	0/1:8,2:8:27.80:86,0,28	0/0:26,0:22:60.16:0,60,815	0/0:24,0:24:72.20:0,72,973	0/0:42,0:41:92.98:0,93,1280	0/0:22,0:22:51.17:0,51,728	0/0:20,0:20:51.14:0,51,693	0/0:36,0:35:86.89:0,87,1241	1/1:2,7:9:2.99:52,3,0	0/1:11,7:18:4.86:526,0,5	1/1:14,7:20:48.16:726,48,0	1/1:1,4:5:15.05:269,15,0
chr10	4716038	.	CAGAG	C	2527.58	PASS	AB=0.818;AC=15;AF=0.268;AN=56;BaseQRankSum=11.788;DP=638;FS=12.338;HRun=0;HaplotypeScore=138.2048;InbreedingCoeff=0.8679;MQ=48.95;MQ0=10;MQRankSum=-7.896;QD=18.72;ReadPosRankSum=-2.088;VQSLOD=2.1074;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:39:35.06:0,35,807	0/0:16,0:16:48.15:0,48,1127	0/0:27,0:11:20.26:0,20,520	0/0:32,0:15:38.20:0,38,615	0/0:18,0:18:48.16:0,48,1174	0/0:24,0:23:47.93:0,48,1152	0/0:24,2:25:63.19:0,63,1476	1/1:23,4:21:62.99:724,63,0	0/0:25,0:23:57.15:0,57,1260	0/0:25,0:24:66.21:0,66,1531	0/0:15,0:14:45.05:0,45,840	0/0:20,0:19:54.16:0,54,1234	0/0:23,0:21:51.16:0,51,1222	0/0:20,0:19:48.16:0,48,1206	1/1:17,8:23:17.87:170,18,0	0/0:21,0:21:60.19:0,60,1408	1/1:19,1:16:23.36:232,23,0	1/1:9,1:8:12.89:127,13,0	0/0:25,0:21:60.19:0,60,1228	0/0:24,0:24:60.21:0,60,1413	0/0:43,0:43:99:0,102,2115	0/0:22,0:22:57.17:0,57,1259	0/0:19,0:19:54.17:0,54,1262	0/0:35,0:34:84.26:0,84,1966	1/1:9,0:9:3.37:37,3,0	0/1:14,4:18:57.92:456,0,58	1/1:9,12:20:48.14:751,48,0	1/1:4,1:5:15.05:224,15,0
chr10	4716093	.	GAGAGAC	G	449.58	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=14.525;DP=819;FS=16.280;HRun=0;HaplotypeScore=210.9102;InbreedingCoeff=0.8907;MQ=68.72;MQ0=10;MQRankSum=-5.017;QD=1.95;ReadPosRankSum=3.150;VQSLOD=1.2984;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:13,26:36:21.03:335,21,0	0/0:14,0:14:27.09:0,27,745	0/0:71,0:48:14.04:0,14,407	0/0:93,0:44:23.87:0,24,494	0/0:15,0:15:30.10:0,30,750	0/0:25,0:24:48.14:0,48,1295	0/0:22,0:22:48.14:0,48,1355	1/1:22,0:22:9.69:24,10,0	0/0:29,0:27:55.10:0,55,1550	0/0:28,0:28:57.19:0,57,1434	0/0:11,0:11:24.08:0,24,506	0/0:30,0:29:69.19:0,69,2060	0/0:23,0:21:51.17:0,51,1629	0/0:24,0:24:54.10:0,54,1588	1/1:26,0:26:23.32:56,23,0	0/0:28,0:28:66.23:0,66,1883	1/1:30,0:30:21.43:52,21,0	1/1:27,0:26:11.95:40,12,0	0/0:26,0:23:45.12:0,45,1121	0/0:18,0:18:36.12:0,36,1067	0/0:54,0:54:99:0,124,3539	0/0:19,0:19:48.16:0,48,1487	0/0:25,0:25:42.14:0,42,1058	0/0:31,0:30:78.21:0,78,2071	1/1:24,0:24:20.21:48,20,0	0/1:23,0:23:20.12:20,0,61	1/1:22,0:21:18.43:46,18,0	1/1:17,0:17:13.27:32,13,0
chr10	4716107	.	GAGAC	G	6482.61	PASS	AB=0.773;AC=16;AF=0.286;AN=56;BaseQRankSum=13.437;DP=816;FS=3.194;HRun=0;HaplotypeScore=147.5822;InbreedingCoeff=0.8239;MQ=63.72;MQ0=14;MQRankSum=-5.016;QD=26.68;ReadPosRankSum=4.786;VQSLOD=4.9018;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:37,1:35:44.77:45,0,233	0/0:17,0:17:42.13:0,42,936	0/0:54,0:30:54.72:0,55,851	0/0:81,0:36:19.65:0,20,650	0/0:13,0:13:33.11:0,33,846	0/0:28,0:27:60.67:0,61,1395	0/0:28,0:28:78.25:0,78,1633	1/1:4,23:27:69.15:1093,69,0	0/0:34,0:32:72.26:0,72,1835	0/0:25,0:25:66.21:0,66,1621	0/0:11,0:11:27.09:0,27,676	0/0:29,0:28:81.27:0,81,1972	0/0:23,0:21:57.19:0,57,1456	0/0:28,0:28:78.20:0,78,1802	1/1:5,24:28:45.15:853,45,0	0/0:28,0:28:84.29:0,84,2037	1/1:3,25:28:44.94:807,45,0	1/1:5,29:33:41.63:796,42,0	0/0:26,0:22:57.19:0,57,1362	0/0:17,0:17:42.12:0,42,1034	0/0:55,0:55:99:0,151,3683	0/0:23,0:23:69.23:0,69,1578	0/0:21,0:21:51.13:0,51,1224	0/0:32,0:31:87.30:0,87,2232	1/1:1,23:24:42.13:765,42,0	0/1:5,15:20:99:720,0,120	1/1:4,18:21:42.14:790,42,0	1/1:0,21:21:33.11:614,33,0
chr10	4716109	.	GAC	G	1762.49	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=15.749;DP=797;FS=2.601;HRun=0;HaplotypeScore=133.7160;InbreedingCoeff=0.8983;MQ=61.95;MQ0=14;MQRankSum=-3.566;QD=8.86;ReadPosRankSum=4.563;VQSLOD=3.5762;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,1:36:11.13:0,11,280	0/0:17,0:17:45.13:0,45,784	0/0:48,0:26:43.11:0,43,771	0/0:74,1:34:13.71:0,14,532	0/0:13,0:13:33.11:0,33,634	0/0:29,0:28:64.03:0,64,1106	0/0:29,0:29:81.25:0,81,1433	1/1:24,0:24:63.94:344,64,0	0/0:32,2:32:21.74:0,22,1390	0/0:24,0:24:66.21:0,66,1206	0/0:10,0:10:27.08:0,27,487	0/0:29,1:29:87.27:0,87,1558	0/0:22,0:20:57.20:0,57,1083	0/0:28,0:28:77.83:0,78,1385	1/1:27,0:26:43.87:254,44,0	0/0:28,0:28:84.27:0,84,1556	1/1:26,1:27:41.17:233,41,0	1/1:34,0:33:43.31:247,43,0	0/0:24,0:20:57.16:0,57,1041	0/0:17,0:17:42.12:0,42,764	0/0:54,1:55:99:0,151,2787	0/0:23,0:23:69.20:0,69,1256	0/0:20,0:20:51.13:0,51,936	0/0:31,0:30:87.28:0,87,1620	1/1:24,0:24:41.02:246,41,0	0/1:20,0:20:99:223,0,110	1/1:22,0:21:40.88:235,41,0	1/1:21,0:21:31.94:180,32,0
chr10	4717631	.	CAGTGCTGTGGGCAGCACTA	C	1137.06	PASS	AB=0.961;AC=7;AF=0.130;AN=54;BaseQRankSum=5.914;DP=747;FS=0.000;HRun=0;HaplotypeScore=347.9566;InbreedingCoeff=-0.1624;MQ=54.74;MQ0=27;MQRankSum=-1.643;QD=10.06;ReadPosRankSum=-6.499;VQSLOD=-0.3016;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:81.20:0,81,1558	0/0:10,0:10:24.08:0,24,456	./.	0/0:14,0:1:3.01:0,3,35	0/0:20,0:19:44.37:0,44,803	0/0:21,0:21:55.43:0,55,1071	0/0:41,0:41:99:0,108,2267	0/0:14,0:3:6.02:0,6,86	0/0:43,0:42:99:0,111,2247	0/0:20,0:17:45.08:0,45,945	0/0:18,0:16:21.03:0,21,430	0/0:46,0:46:99:0,123,2777	0/0:42,0:42:99:0,108,2448	0/0:48,0:48:99:0,129,2534	0/1:16,0:14:63.83:235,0,64	0/0:31,0:31:84.29:0,84,1882	0/1:17,0:13:99:105,0,145	0/1:19,0:17:99:211,0,127	0/0:20,0:14:35.60:0,36,639	0/0:18,0:14:36.12:0,36,710	0/0:87,0:86:99:0,205,4550	0/0:28,0:24:63.22:0,63,1298	0/0:18,0:16:45.15:0,45,799	0/0:46,0:46:99:0,126,3033	0/1:8,0:7:78.24:78,0,114	0/1:15,9:21:99:265,0,302	0/1:18,0:17:72.58:73,0,485	0/1:11,0:11:96.41:299,0,96
chr10	4718733	.	CCTCT	C	72.44	PASS	AB=0.786;AC=5;AF=0.119;AN=42;BaseQRankSum=-0.050;DP=629;FS=0.000;HRun=0;HaplotypeScore=100.5146;InbreedingCoeff=0.3951;MQ=69.26;MQ0=8;MQRankSum=1.859;QD=1.10;ReadPosRankSum=1.427;VQSLOD=1.7363;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:24,9:33:0:0,0,0	./.	./.	./.	./.	0/0:18,0:18:5.84:0,6,39	0/0:31,0:31:4.11:0,4,94	0/0:34,0:34:4.25:0,4,35	1/1:14,1:15:4.13:138,4,0	0/0:14,0:14:5.99:0,6,53	./.	0/0:22,0:22:3.31:0,3,15	0/0:22,0:22:11.98:0,12,157	0/0:20,0:19:6.49:0,6,141	0/0:14,0:13:9.48:0,9,109	0/0:12,0:12:8.31:0,8,102	0/0:27,0:27:36.49:0,36,563	0/0:21,0:21:25.53:0,26,310	0/0:16,0:15:0.47:0,0,1	./.	0/0:40,0:39:17.97:0,18,186	1/1:18,0:17:2.99:24,3,0	0/0:15,0:15:3.01:0,3,70	0/0:33,0:33:36.02:0,36,589	./.	0/0:19,0:18:7.26:0,7,72	0/0:22,0:21:17.94:0,18,182	0/0:14,0:14:3.01:0,3,43
chr10	4721408	.	CGGATAGATAGATAGATAGAT	C	6182.29	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=11.741;DP=702;FS=10.283;HRun=0;HaplotypeScore=346.3803;InbreedingCoeff=0.9307;MQ=56.95;MQ0=4;MQRankSum=-7.434;QD=33.06;ReadPosRankSum=-1.672;VQSLOD=1.9562;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:28:26.42:0,26,312	0/0:6,0:6:18.03:0,18,606	0/0:15,0:10:22.70:0,23,241	0/0:14,0:10:20.60:0,21,216	0/0:34,0:34:53.50:0,53,953	0/0:28,0:28:81.12:0,81,4312	0/0:28,0:27:81.08:0,81,2627	1/1:10,26:32:6.21:879,6,0	0/0:27,0:27:78.70:0,79,4519	0/0:28,0:28:81.17:0,81,4661	0/0:27,0:27:78.22:0,78,3803	0/0:34,0:34:99:0,99,5070	0/0:27,0:27:81.10:0,81,4027	0/0:21,0:21:62.40:0,62,2858	1/1:16,5:20:44.96:679,45,0	0/0:24,0:24:72.10:0,72,3452	1/1:10,0:13:5.15:330,5,0	1/1:15,1:16:44.89:928,45,0	0/0:21,0:21:60.10:0,60,3054	0/0:25,0:25:71.93:0,72,3574	0/0:44,0:44:99:0,129,6464	0/0:28,0:28:81.05:0,81,4299	0/0:29,0:29:87.17:0,87,4329	0/0:24,0:24:68.89:0,69,3095	1/1:21,6:27:59.76:664,60,0	1/1:0,31:31:80.83:1967,81,0	1/1:0,27:27:6.02:316,6,0	1/1:0,15:15:9.03:419,9,0
chr10	4721409	.	G	GGATAGATA	225.65	PASS	AB=0.988;AC=7;AF=0.152;AN=46;BaseQRankSum=5.128;DP=702;FS=6.102;HRun=0;HaplotypeScore=225.3206;InbreedingCoeff=0.3494;MQ=55.90;MQ0=5;MQRankSum=-3.469;QD=1.61;ReadPosRankSum=1.438;VQSLOD=2.2855;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:27:3:0,3,50	0/0:6,0:6:6.02:0,6,139	./.	./.	1/1:21,15:37:7.84:125,8,0	0/0:28,0:28:48.16:0,48,1113	0/0:29,0:28:27.09:0,27,573	./.	0/0:27,0:27:51.16:0,51,1205	0/0:29,0:29:60.21:0,60,1374	0/0:27,0:27:42.60:0,43,852	0/0:33,0:33:66.23:0,66,1458	0/0:25,0:25:48.16:0,48,1039	0/0:21,0:21:36.11:0,36,740	./.	0/0:24,0:24:33.11:0,33,774	0/1:14,0:13:0.60:1,0,18	0/1:15,0:15:10.48:60,0,10	0/0:21,0:21:30.10:0,30,680	0/0:27,0:26:45.14:0,45,966	0/0:44,0:44:75.25:0,75,1626	0/0:28,0:28:60.19:0,60,1215	0/0:28,0:28:54.14:0,54,1128	0/0:22,0:22:36.12:0,36,781	./.	0/1:31,0:31:1.63:126,0,2	0/1:27,0:25:4.63:17,0,5	0/1:15,0:15:6.02:14,0,6
chr10	4721474	.	TGATA	T	851.21	PASS	AB=0.894;AC=22;AF=0.458;AN=48;BaseQRankSum=-0.867;DP=746;FS=0.000;HRun=0;HaplotypeScore=189.7158;InbreedingCoeff=0.2548;MQ=52.40;MQ0=36;MQRankSum=0.716;QD=1.92;ReadPosRankSum=-0.029;VQSLOD=2.4686;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:23:2.32:0,2,16	0/0:16,0:16:15.05:0,15,267	./.	./.	1/1:30,4:31:15.04:202,15,0	0/0:29,0:30:26.12:0,26,328	0/0:22,0:19:0.47:0,0,1	./.	0/1:31,0:28:22.42:66,0,22	1/1:32,6:38:13.84:177,14,0	1/1:19,6:25:2.93:45,3,0	0/1:20,16:36:71.83:119,0,72	1/1:15,12:28:6.02:90,6,0	./.	0/1:24,0:23:0:0,0,0	1/1:21,13:32:8.83:125,9,0	0/0:14,0:11:0:0,0,0	0/0:10,0:10:2.69:0,3,7	1/1:26,0:25:6.01:65,6,0	0/1:19,0:36:0:0,0,0	0/0:28,0:24:15.02:0,15,214	0/0:15,0:27:0.47:0,0,1	0/1:21,0:28:0.01:0,0,1	0/1:14,0:12:12.01:22,0,12	0/0:35,0:35:24.23:0,24,162	0/1:29,0:28:18.84:19,0,20	1/1:34,0:32:2.98:25,3,0	0/1:23,0:23:33.97:35,0,34
chr10	4721536	.	ATAGATAGG	A	3610.38	PASS	AB=1.000;AC=20;AF=0.357;AN=56;BaseQRankSum=12.382;DP=712;FS=13.478;HRun=0;HaplotypeScore=208.1602;InbreedingCoeff=0.5703;MQ=54.08;MQ0=40;MQRankSum=-0.707;QD=11.25;ReadPosRankSum=-0.072;VQSLOD=1.3624;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:32,0:29:8.97:9,0,261	0/0:15,0:15:39.01:0,39,590	0/0:14,0:10:30:0,30,291	0/1:5,0:2:1.40:1,0,19	0/0:32,0:31:29.49:0,29,543	0/0:24,0:24:37.96:0,38,777	0/0:16,0:14:14.99:0,15,246	1/1:46,0:21:62.86:533,63,0	0/1:26,0:22:65.01:65,0,302	0/0:36,0:36:50.27:0,50,797	0/0:24,0:24:47.94:0,48,451	0/0:35,0:35:59.90:0,60,729	0/0:37,0:37:68.96:0,69,649	0/0:18,0:18:29.83:0,30,238	1/1:26,0:26:50.50:430,51,0	0/0:32,0:31:51.42:0,51,456	1/1:20,0:18:41.81:349,42,0	1/1:17,0:16:37.65:295,38,0	0/1:28,0:23:28.22:28,0,346	0/0:40,0:40:86.01:0,86,623	0/0:16,0:15:36.02:0,36,563	0/0:29,0:29:38.59:0,39,314	0/0:23,0:23:35.95:0,36,300	0/1:12,0:10:42.78:43,0,101	1/1:34,0:34:48.41:380,48,0	0/1:25,0:24:15.07:540,0,15	1/1:23,6:29:46.62:487,47,0	1/1:18,3:21:44.89:451,45,0
chr10	4722766	.	TAGCTGTCAATAACTC	T	6038.14	PASS	AB=0.545;AC=5;AF=0.089;AN=56;BaseQRankSum=11.244;DP=765;FS=1.184;HRun=0;HaplotypeScore=320.4950;InbreedingCoeff=0.7509;MQ=87.49;MQ0=0;MQRankSum=-10.960;QD=104.11;ReadPosRankSum=4.585;VQSLOD=3.7796;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,163,11223	0/0:13,0:13:36.12:0,36,2676	0/0:28,0:28:69.15:0,69,3810	0/0:26,0:26:72.20:0,72,4101	0/0:23,0:23:66.21:0,66,4633	0/0:29,0:29:84.29:0,84,6066	0/0:34,0:34:96.33:0,96,6467	0/0:37,0:37:99:0,102,6285	0/0:24,0:24:72.25:0,72,4803	0/0:33,0:33:96.33:0,96,6563	0/0:22,0:22:63.22:0,63,4602	0/0:22,0:22:63.22:0,63,4574	0/0:32,0:32:96.27:0,96,5816	0/0:28,0:28:81.24:0,81,5422	0/0:28,0:28:81.28:0,81,5664	0/0:21,0:21:63.22:0,63,4662	0/0:38,0:37:99:0,114,7573	0/0:25,0:25:75.21:0,75,4895	0/0:13,0:13:36.11:0,36,2377	0/0:21,0:21:60.19:0,60,4093	0/0:54,0:54:99:0,157,11460	0/0:27,0:27:75.26:0,75,5499	0/0:12,0:12:36.08:0,36,2432	0/0:31,0:31:93.30:0,93,6402	0/0:31,0:31:93.32:0,93,6019	0/1:5,25:30:99:3184,0,147	1/1:1,20:21:57.15:2449,57,0	1/1:4,3:7:9.03:405,9,0
chr10	4723518	.	GACACACAC	G	1857.35	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=6.646;DP=631;FS=6.172;HRun=0;HaplotypeScore=161.8692;InbreedingCoeff=0.6827;MQ=69.71;MQ0=5;MQRankSum=-6.937;QD=22.38;ReadPosRankSum=-0.900;VQSLOD=2.6452;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,23:34:17.36:1428,17,0	0/0:12,0:12:27.09:0,27,1049	0/0:34,0:26:30.10:0,30,1088	0/1:29,0:23:7.24:7,0,937	0/0:15,0:20:57.20:0,57,2074	0/0:21,0:23:54.19:0,54,2079	0/0:32,0:33:75.26:0,75,2857	0/0:19,0:27:51.16:0,51,1865	0/0:28,0:30:84.29:0,84,3310	0/0:26,0:26:48.16:0,48,1957	0/0:12,0:13:21.07:0,21,804	0/0:24,0:24:66.21:0,66,2592	0/0:16,0:16:36.12:0,36,1419	0/0:20,0:22:57.20:0,57,2237	0/0:29,0:28:15.99:0,16,455	0/0:27,0:31:81.28:0,81,3127	1/1:11,9:20:21.07:545,21,0	0/0:11,0:10:21.07:0,21,803	0/0:14,0:14:24.08:0,24,852	0/0:23,0:22:54.19:0,54,2112	0/0:25,0:29:75.26:0,75,2701	0/0:24,0:25:60.18:0,60,2223	0/0:13,0:14:33.11:0,33,1204	0/0:35,0:39:72.25:0,72,2725	0/0:7,0:7:3.01:0,3,71	0/0:24,0:20:45.15:0,45,1647	0/0:18,0:19:36.12:0,36,1153	0/0:2,0:2:3.01:0,3,121
chr10	4723912	.	G	GGGCCT	8827.67	PASS	AB=0.580;AC=13;AF=0.232;AN=56;BaseQRankSum=10.923;DP=625;FS=11.312;HRun=0;HaplotypeScore=122.2581;InbreedingCoeff=0.8969;MQ=87.21;MQ0=0;MQRankSum=-12.133;QD=58.46;ReadPosRankSum=0.471;VQSLOD=5.3680;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,0:39:72.25:1293,72,0	0/0:7,0:7:21.07:0,21,447	0/0:21,0:21:33:0,33,1010	0/0:27,0:27:60.17:0,60,1407	0/0:13,0:13:36.12:0,36,729	0/0:23,0:23:69.24:0,69,1420	0/0:28,0:28:84.27:0,84,1729	0/0:26,0:26:72.23:0,72,1388	0/0:25,0:25:75.23:0,75,1487	0/0:16,0:16:42.14:0,42,868	0/0:13,0:13:36.12:0,36,687	0/0:32,0:32:93.32:0,93,1932	0/0:31,0:31:87.26:0,87,1775	0/0:24,0:24:72.21:0,72,1443	1/1:1,24:27:63.10:1900,63,0	0/0:16,0:16:48.16:0,48,1022	0/0:29,0:29:84.25:0,84,1704	1/1:3,17:20:54.18:1593,54,0	0/0:18,0:18:48.15:0,48,958	0/0:15,0:15:42.14:0,42,883	0/0:51,0:51:99:0,154,3234	0/0:14,0:14:42.14:0,42,875	0/0:13,0:13:36.11:0,36,676	0/0:32,0:32:96.32:0,96,1996	1/1:3,6:10:18.06:498,18,0	0/1:8,18:29:49.55:1891,0,50	1/1:0,11:10:27.09:851,27,0	1/1:2,12:14:27.09:802,27,0
chr10	4724175	.	GTTGCTCACGCTCCCACCCTC	G	4356.52	PASS	AB=0.645;AC=11;AF=0.196;AN=56;BaseQRankSum=9.648;DP=561;FS=4.357;HRun=0;HaplotypeScore=275.4609;InbreedingCoeff=0.7950;MQ=76.59;MQ0=0;MQRankSum=-6.881;QD=38.90;ReadPosRankSum=0.885;VQSLOD=3.6903;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:93.32:0,93,6651	0/0:8,0:8:18.06:0,18,1185	0/0:13,0:13:5.90:0,6,1005	0/0:11,0:11:20.87:0,21,869	0/0:10,0:10:24.08:0,24,2020	0/0:17,0:17:48.16:0,48,3609	0/0:25,0:25:54.14:0,54,3628	0/0:22,0:22:54.18:0,54,3049	0/0:17,0:17:45.15:0,45,3048	0/0:26,0:26:63.22:0,63,3854	0/0:14,0:14:30.10:0,30,2233	0/0:31,0:31:75.24:0,75,6040	0/0:23,0:23:51.15:0,51,3325	0/0:37,0:37:99:0,102,7214	1/1:7,16:23:21.07:975,21,0	0/0:10,0:10:21.07:0,21,1684	0/0:23,0:23:57.18:0,57,4399	1/1:8,13:21:9.03:483,9,0	0/0:14,0:14:27.05:0,27,1239	0/0:7,0:7:21.07:0,21,1413	0/0:58,0:58:99:0,147,10825	0/0:13,0:13:32.78:0,33,2819	0/0:8,0:8:21.07:0,21,1670	0/0:22,0:22:51.17:0,51,4096	1/1:1,10:11:6.02:322,6,0	0/1:9,11:20:99:819,0,201	1/1:8,16:24:28.92:1433,29,0	1/1:4,9:12:6.02:323,6,0
chr10	4725493	.	G	GTT	9583.60	PASS	AB=0.723;AC=18;AF=0.321;AN=56;BaseQRankSum=-12.213;DP=653;FS=2.747;HRun=2;HaplotypeScore=80.0484;InbreedingCoeff=0.8354;MQ=93.19;MQ0=0;MQRankSum=-2.312;QD=45.21;ReadPosRankSum=1.160;VQSLOD=4.8205;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,39:40:99:1966,105,0	0/1:9,1:10:26.11:26,0,367	0/0:31,0:31:82.51:0,83,1159	0/0:28,0:28:69.10:0,69,930	0/0:11,0:11:30.10:0,30,442	0/0:12,0:12:36.12:0,36,530	0/0:26,0:26:78.23:0,78,1109	1/1:3,22:25:63.16:1056,63,0	0/0:31,0:31:90.29:0,90,1304	0/0:23,0:23:63.18:0,63,859	0/0:13,0:13:36.09:0,36,491	0/0:24,0:24:69.22:0,69,994	0/0:27,0:27:81.26:0,81,1172	0/0:35,0:35:99:0,102,1499	1/1:3,23:26:56.80:1068,57,0	0/0:12,0:12:33.10:0,33,466	1/1:0,20:20:54.19:1012,54,0	1/1:1,26:27:72.18:1279,72,0	0/0:29,0:29:84.25:0,84,1183	0/0:19,0:19:54.18:0,54,793	0/0:55,0:55:99:0,156,2233	0/0:16,0:16:39.12:0,39,553	0/0:12,0:12:30.10:0,30,442	0/0:37,0:37:99:0,108,1523	1/1:0,13:14:36.12:674,36,0	0/1:3,18:22:22.15:1041,0,22	1/1:1,21:21:60.21:1124,60,0	1/1:0,6:6:18.06:337,18,0
chr10	4726120	.	T	TGC	6131.73	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=11.515;DP=670;FS=12.433;HRun=0;HaplotypeScore=92.9045;InbreedingCoeff=0.9695;MQ=74.38;MQ0=1;MQRankSum=-0.907;QD=52.41;ReadPosRankSum=4.748;VQSLOD=4.8400;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,102,1640	0/0:7,0:7:21.07:0,21,342	0/0:14,0:14:39.12:0,39,611	0/0:11,0:11:5.07:0,5,326	0/0:22,0:22:63.21:0,63,1018	0/0:23,0:23:69.24:0,69,1122	0/0:33,0:33:99:0,99,1561	0/0:18,0:18:51.17:0,51,804	0/0:33,0:33:99:0,99,1577	0/0:25,0:25:75.24:0,75,1174	0/0:10,0:10:30.10:0,30,489	0/0:32,0:32:96.29:0,96,1513	0/0:33,0:33:96.31:0,96,1527	0/0:24,0:24:72.25:0,72,1159	1/1:0,20:20:57.19:1092,57,0	0/0:22,0:22:66.20:0,66,1029	0/0:33,0:33:96.31:0,96,1540	1/1:0,37:37:99:2061,108,0	0/0:26,0:26:75.24:0,75,1188	0/0:15,0:15:42.14:0,42,682	0/0:63,0:62:99:0,169,2717	0/0:17,0:17:51.17:0,51,832	0/0:15,0:15:42.14:0,42,667	0/0:41,0:41:99:0,117,1885	1/1:1,11:13:33.11:628,33,0	1/1:1,19:22:14.25:1125,14,0	1/1:0,16:16:41.77:817,42,0	1/1:1,8:9:21.07:410,21,0
chr10	4726346	.	CG	C	2307.66	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.085;DP=747;FS=2.330;HRun=1;HaplotypeScore=72.8102;InbreedingCoeff=0.9993;MQ=81.07;MQ0=0;MQRankSum=-1.695;QD=39.79;ReadPosRankSum=-2.042;VQSLOD=3.5093;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,126,1988	0/0:9,0:9:27.09:0,27,430	0/0:23,0:23:69.18:0,69,1070	0/0:20,0:20:50.37:0,50,792	0/0:17,0:17:48.16:0,48,758	0/0:23,0:23:69.19:0,69,1074	0/0:29,0:29:87.29:0,87,1369	1/1:0,27:27:81.27:1129,81,0	0/0:29,0:29:87.30:0,87,1381	0/0:32,0:32:93.32:0,93,1472	0/0:15,0:15:45.14:0,45,681	0/0:44,0:44:99:0,132,2098	0/0:23,0:23:69.22:0,69,1066	0/0:27,0:27:81.25:0,81,1245	0/0:34,0:34:96.29:0,96,1460	0/0:31,0:31:93.32:0,93,1487	1/1:0,31:31:93.31:1300,93,0	0/0:28,0:28:81.23:0,81,1265	0/0:29,0:29:84.28:0,84,1312	0/0:16,0:16:48.14:0,48,742	0/0:40,0:40:99:0,120,1916	0/0:30,0:30:90.31:0,90,1426	0/0:21,0:21:63.18:0,63,954	0/0:38,0:38:99:0,114,1794	0/0:29,0:29:87.28:0,87,1366	0/0:27,0:27:78.24:0,78,1221	0/0:22,0:22:66.21:0,66,1028	0/0:11,0:11:33.11:0,33,527
chr10	4726431	.	G	GA	7269.87	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-15.057;DP=684;FS=1.363;HRun=7;HaplotypeScore=66.7411;InbreedingCoeff=0.9988;MQ=78.15;MQ0=0;MQRankSum=-2.951;QD=29.67;ReadPosRankSum=0.093;VQSLOD=5.1973;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,39:40:99:1232,102,0	0/0:11,0:11:33.05:0,33,319	0/0:26,0:26:59.21:0,59,534	0/0:19,0:19:36.76:0,37,365	0/0:18,0:18:51.08:0,51,492	0/0:27,0:27:81.13:0,81,782	0/0:25,0:25:63.08:0,63,603	1/1:3,26:29:78.23:930,78,0	0/0:18,0:18:54.09:0,54,521	0/0:26,0:26:75.12:0,75,724	0/0:8,0:8:24.04:0,24,232	0/0:33,0:33:72.09:0,72,690	0/0:31,0:31:90.13:0,90,864	0/0:30,0:30:78.06:0,78,738	1/1:4,42:46:99:1413,117,0	0/0:21,0:21:54.09:0,54,521	1/1:6,18:24:66.19:782,66,0	1/1:2,16:18:45.14:544,45,0	0/0:32,0:32:78.08:0,78,739	0/0:17,0:17:48.08:0,48,463	0/0:20,0:20:60.08:0,60,573	0/0:28,0:28:66.10:0,66,635	0/0:18,0:18:48.08:0,48,463	0/0:31,0:31:87.09:0,87,831	1/1:8,18:26:51.16:616,51,0	1/1:6,26:32:26.27:861,26,0	1/1:3,18:21:54.14:638,54,0	1/1:1,8:9:21.06:253,21,0
chr10	4728828	.	CT	C	5199.26	PASS	AB=0.519;AC=11;AF=0.196;AN=56;BaseQRankSum=16.726;DP=765;FS=24.754;HRun=2;HaplotypeScore=93.7275;InbreedingCoeff=0.8915;MQ=86.54;MQ0=0;MQRankSum=0.288;QD=35.13;ReadPosRankSum=2.360;VQSLOD=2.9793;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:81,0:81:99:0,241,3534	0/0:15,0:15:39.10:0,39,557	0/0:31,0:31:84.22:0,84,1160	0/0:24,0:24:9.96:0,10,685	0/0:14,0:14:42.13:0,42,592	0/0:19,0:19:57.19:0,57,854	0/0:32,0:32:93.28:0,93,1349	0/0:32,0:32:90.28:0,90,1311	0/0:30,0:30:81.25:0,81,1165	0/0:21,0:20:60.20:0,60,877	0/0:22,0:22:60.18:0,60,860	0/0:29,0:29:87.29:0,87,1301	0/0:24,0:24:72.23:0,72,1057	0/0:31,0:31:93.26:0,93,1364	1/1:1,29:30:81.26:1051,81,0	0/0:31,0:31:93.30:0,93,1371	0/0:32,0:32:87.28:0,87,1284	1/1:1,29:30:84.27:1091,84,0	0/0:21,0:21:63.20:0,63,925	0/0:15,0:15:45.12:0,45,615	0/0:58,0:58:99:0,175,2587	0/0:14,0:14:38.73:0,39,564	0/0:14,0:14:39.13:0,39,578	0/0:27,0:27:81.27:0,81,1214	1/1:1,21:22:60.19:779,60,0	0/1:2,25:27:8.69:876,0,9	1/1:0,26:26:69.22:896,69,0	1/1:0,13:13:39.13:506,39,0
chr10	4729259	.	T	TG	1632.83	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=11.286;DP=616;FS=1.926;HRun=3;HaplotypeScore=75.5407;InbreedingCoeff=0.4430;MQ=76.27;MQ0=4;MQRankSum=-1.307;QD=6.86;ReadPosRankSum=4.022;VQSLOD=0.8125;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,32:35:81.13:1076,81,0	0/0:9,0:9:26.99:0,27,264	0/0:37,0:23:42.45:0,42,432	0/0:25,0:18:27.16:0,27,246	0/0:37,0:37:96.45:0,96,1181	0/0:16,0:16:48.14:0,48,564	0/0:15,0:15:42.10:0,42,479	0/1:30,0:30:68.70:69,0,119	0/0:12,0:12:36.11:0,36,430	0/0:26,0:26:72.16:0,72,820	0/0:22,0:22:60.12:0,60,699	0/0:18,0:18:51.14:0,51,598	0/0:9,0:9:27.08:0,27,321	0/0:12,0:12:33.09:0,33,384	1/1:21,0:21:12.32:80,12,0	0/0:28,0:28:81.23:0,81,950	1/1:31,0:31:2.26:110,2,0	0/1:30,0:30:97.11:113,0,97	0/0:22,0:22:57.13:0,57,640	0/0:27,0:27:63.78:0,64,789	0/0:18,0:18:54.12:0,54,604	0/0:12,0:12:36.09:0,36,407	0/0:21,0:21:51.13:0,51,590	0/0:12,0:12:33.09:0,33,384	0/1:22,0:22:16.15:67,0,16	0/1:29,0:29:23.51:109,0,24	0/1:21,0:21:69.63:75,0,70	1/1:19,0:19:15.67:102,16,0
chr10	4729262	.	G	GT	5111.80	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-9.883;DP=610;FS=2.948;HRun=9;HaplotypeScore=61.6674;InbreedingCoeff=0.9605;MQ=75.20;MQ0=4;MQRankSum=-1.056;QD=22.32;ReadPosRankSum=2.801;VQSLOD=5.8069;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:33,0:33:76.07:455,76,0	0/0:9,0:9:20.99:0,21,182	0/0:39,0:24:38.17:0,38,302	0/0:27,0:20:2.19:0,2,72	0/0:35,1:36:68.80:0,69,826	0/0:16,0:16:47.99:0,48,417	0/0:15,0:15:41.97:0,42,358	1/1:7,19:26:34.06:572,34,0	0/0:12,0:12:35.99:0,36,312	0/0:24,0:24:63.84:0,64,542	0/0:22,0:22:65.94:0,66,564	0/0:18,0:18:53.96:0,54,462	0/0:9,0:9:26.99:0,27,234	0/0:12,0:12:32.96:0,33,279	1/1:1,21:22:48.13:531,48,0	0/0:29,0:29:86.93:0,87,744	1/1:3,25:28:47.58:648,48,0	1/1:6,22:28:11.12:572,11,0	0/0:21,0:21:50.85:0,51,431	0/0:27,1:28:26.91:0,27,458	0/0:20,0:20:50.97:0,51,442	0/0:12,0:12:35.99:0,36,312	0/0:20,0:20:59.92:0,60,506	0/0:12,0:12:32.97:0,33,282	1/1:3,17:20:45.12:498,45,0	1/1:3,27:30:81.17:866,81,0	1/1:4,17:21:16.06:405,16,0	1/1:3,17:21:51.14:564,51,0
chr10	4729841	.	AACAC	A	417.83	PASS	AB=0.986;AC=18;AF=0.346;AN=52;BaseQRankSum=1.552;DP=625;FS=12.818;HRun=0;HaplotypeScore=117.8982;InbreedingCoeff=0.1267;MQ=52.85;MQ0=36;MQRankSum=0.292;QD=1.29;ReadPosRankSum=-1.246;VQSLOD=1.4447;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:32,9:42:5.68:38,6,0	1/1:8,0:13:3:28,3,0	./.	./.	1/1:9,0:8:0.47:1,0,0	0/1:30,0:30:28.91:29,0,215	0/0:26,0:22:2.87:0,3,70	0/0:23,0:22:1.82:0,2,5	0/0:19,0:18:2.63:0,3,177	0/0:12,0:12:4.87:0,5,41	0/0:12,0:11:5.73:0,6,34	0/1:21,0:20:4.12:4,0,135	0/0:13,0:12:12.91:0,13,102	0/1:21,0:20:58.32:58,0,110	0/0:23,0:23:21.53:0,22,344	0/1:27,1:28:26.81:70,0,27	0/0:27,0:27:24.90:0,25,290	0/0:23,0:20:26.97:0,27,359	0/1:17,0:15:1.38:1,0,18	0/0:14,0:14:9.01:0,9,151	0/1:34,1:34:39.85:40,0,450	0/0:23,0:23:23.11:0,23,201	0/0:7,0:6:2.90:0,3,16	0/1:54,1:53:56.87:57,0,389	0/0:23,0:22:18.06:0,18,321	0/1:22,0:20:6.44:6,0,59	1/1:20,0:20:5.87:57,6,0	1/1:10,0:9:15.04:176,15,0
chr10	4729893	.	CACAT	C	1598.03	PASS	AB=1.000;AC=14;AF=0.250;AN=56;BaseQRankSum=5.936;DP=673;FS=9.468;HRun=0;HaplotypeScore=123.2116;InbreedingCoeff=0.2428;MQ=60.76;MQ0=26;MQRankSum=-2.784;QD=5.67;ReadPosRankSum=-0.180;VQSLOD=2.0463;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:35:23.05:0,23,266	0/0:13,0:13:10.20:0,10,119	0/0:29,0:24:64.94:0,65,610	0/1:33,0:20:4.59:5,0,320	0/0:14,0:12:5.85:0,6,200	0/0:25,0:25:44.29:0,44,543	0/0:30,0:26:50.18:0,50,487	0/0:23,0:21:60.73:0,61,488	0/0:17,0:17:37.75:0,38,407	0/0:22,0:21:32.72:0,33,453	0/0:14,0:12:29.89:0,30,242	0/0:27,0:25:23.56:0,24,448	0/0:25,0:25:35.58:0,36,540	0/1:20,0:19:1.54:2,0,159	0/1:24,0:24:99:235,0,115	0/1:24,0:23:39.60:40,0,320	0/1:25,0:25:47.44:292,0,47	0/1:29,0:26:87.84:280,0,88	0/0:13,0:11:14.68:0,15,201	0/0:15,0:15:20.92:0,21,307	0/0:48,0:46:12.83:0,13,767	0/0:21,0:20:35.95:0,36,349	0/0:19,0:18:33.33:0,33,325	0/1:46,0:46:2.24:2,0,835	0/1:26,0:25:92.01:92,0,143	1/1:26,0:23:33.02:435,33,0	1/1:2,16:18:5.55:93,6,0	1/1:2,9:9:15.05:282,15,0
chr10	4730108	.	AGCCTCTGT	A	1131.50	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.973;DP=523;FS=3.527;HRun=0;HaplotypeScore=134.2905;InbreedingCoeff=0.9560;MQ=77.07;MQ0=0;MQRankSum=-6.478;QD=49.20;ReadPosRankSum=-0.421;VQSLOD=3.5803;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,18:23:45.15:1226,45,0	0/0:12,0:12:36.11:0,36,1440	0/0:10,0:10:27.09:0,27,957	0/0:14,0:14:41.84:0,42,1475	0/0:7,0:7:15.05:0,15,548	0/0:13,0:13:36.12:0,36,1516	0/0:33,0:33:96.31:0,96,4085	0/0:27,0:27:65.96:0,66,2551	0/0:25,0:25:66.21:0,66,2693	0/0:14,0:14:39.13:0,39,1631	0/0:14,0:14:36.11:0,36,1272	0/0:26,0:26:75.26:0,75,3139	0/0:26,0:26:69.24:0,69,2984	0/0:14,0:14:42.14:0,42,1841	0/0:30,0:30:90.31:0,90,3907	0/0:20,0:20:60.19:0,60,2433	0/0:29,0:29:78.27:0,78,3348	0/0:24,0:24:66.20:0,66,2679	0/0:23,0:23:63.22:0,63,2318	0/0:10,0:10:18.06:0,18,631	0/0:38,0:38:99:0,114,4933	0/0:14,0:14:30.10:0,30,1320	0/0:15,0:15:36.11:0,36,1272	0/0:25,0:25:69.24:0,69,2932	0/0:8,0:8:21.07:0,21,916	0/0:11,0:11:33.11:0,33,1360	0/0:13,0:13:39.13:0,39,1703	0/0:5,0:5:15.05:0,15,637
chr10	4730113	.	CTGTG	C	320.30	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.490;DP=530;FS=2.229;HRun=0;HaplotypeScore=94.0241;InbreedingCoeff=0.9767;MQ=77.01;MQ0=0;MQRankSum=-6.513;QD=16.86;ReadPosRankSum=0.071;VQSLOD=2.8707;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:19:45.03:415,45,0	0/0:12,0:12:33.11:0,33,926	0/0:11,0:11:33.11:0,33,829	0/0:13,0:13:39.13:0,39,1039	0/0:9,0:9:18.06:0,18,430	0/0:13,0:13:39.10:0,39,1027	0/0:36,0:36:99:0,108,3041	0/0:30,0:30:78.07:0,78,1984	0/0:21,0:21:63.22:0,63,1769	0/0:13,0:13:39.13:0,39,1083	0/0:13,0:13:33.09:0,33,831	0/0:26,0:26:78.25:0,78,2115	0/0:25,0:25:75.26:0,75,2100	0/0:16,0:16:48.16:0,48,1347	0/0:31,0:31:93.32:0,93,2633	0/0:22,0:21:66.23:0,66,1830	0/0:29,0:29:87.28:0,87,2440	0/0:21,0:21:63.22:0,63,1783	0/0:22,0:22:66.22:0,66,1571	0/0:7,0:7:18.06:0,18,430	0/0:42,0:42:99:0,126,3580	0/0:13,0:13:30.10:0,30,869	0/0:15,4:19:38.69:0,39,957	0/0:27,0:27:72.25:0,72,2001	0/0:8,0:8:24.08:0,24,693	0/0:11,0:11:33.11:0,33,915	0/0:14,0:14:42.14:0,42,1213	0/0:7,0:7:21.07:0,21,579
chr10	4731697	.	G	GA	6757.79	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-14.719;DP=594;FS=0.000;HRun=0;HaplotypeScore=55.9486;InbreedingCoeff=0.9883;MQ=82.02;MQ0=0;MQRankSum=-2.009;QD=43.04;ReadPosRankSum=6.153;VQSLOD=4.6461;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,108,1489	0/0:3,0:3:8.92:0,9,100	0/0:11,0:12:32.62:0,33,364	0/0:24,0:24:30.34:0,30,779	0/0:20,0:20:54.16:0,54,720	0/0:22,0:22:66.19:0,66,886	0/0:40,0:40:99:0,120,1641	0/0:22,0:22:63.21:0,63,876	0/0:16,0:16:48.16:0,48,668	0/0:20,0:20:57.19:0,57,786	0/0:15,0:15:41.87:0,42,544	0/0:24,0:24:66.03:0,66,876	0/0:26,0:26:78.24:0,78,1051	0/0:19,0:19:57.18:0,57,779	1/1:1,25:26:69.24:1102,69,0	0/0:24,0:24:72.21:0,72,970	1/1:1,26:27:72.25:1149,72,0	1/1:2,24:26:63.21:1006,63,0	0/0:19,0:19:54.13:0,54,686	0/0:13,0:13:39.13:0,39,542	0/0:37,0:36:99:0,102,1398	0/0:12,0:12:36.10:0,36,462	0/0:9,0:9:27.07:0,27,341	0/0:23,0:23:69.22:0,69,947	1/1:0,25:25:75.26:1197,75,0	1/1:2,22:24:27.29:1011,27,0	1/1:0,20:20:57.19:910,57,0	1/1:0,9:9:24.08:383,24,0
chr10	4732648	.	AC	A	5826.19	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=15.603;DP=631;FS=2.038;HRun=1;HaplotypeScore=80.3165;InbreedingCoeff=0.9626;MQ=87.87;MQ0=0;MQRankSum=-1.798;QD=39.63;ReadPosRankSum=4.570;VQSLOD=5.4303;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:87.28:0,87,1366	0/0:8,0:8:24.04:0,24,334	0/0:23,0:23:69.07:0,69,933	0/0:20,0:21:46.68:0,47,567	0/0:15,0:15:42.14:0,42,669	0/0:15,0:15:45.15:0,45,718	0/0:26,0:26:78.25:0,78,1224	0/0:22,0:22:60.18:0,60,896	0/0:37,0:37:99:0,108,1703	0/0:18,0:18:51.16:0,51,793	0/0:2,0:2:3.01:0,3,48	0/0:36,0:36:99:0,108,1724	0/0:36,0:36:99:0,108,1702	0/0:25,0:25:75.23:0,75,1171	1/1:0,30:30:78.26:1088,78,0	0/0:32,0:32:96.33:0,96,1535	1/1:0,32:32:90.30:1259,90,0	1/1:0,31:31:93.31:1301,93,0	0/0:21,0:21:63.21:0,63,1007	0/0:5,0:5:15.05:0,15,238	0/0:66,0:66:99:0,199,3135	0/0:11,0:11:33.11:0,33,528	0/0:5,0:5:15.05:0,15,240	0/0:31,0:31:93.24:0,93,1410	1/1:0,14:14:36.12:503,36,0	1/1:0,12:12:36.12:502,36,0	1/1:0,18:18:54.18:755,54,0	1/1:0,10:10:30.10:419,30,0
chr10	4733925	.	G	GA	626.42	PASS	AC=26;AF=0.867;AN=30;BaseQRankSum=-4.539;DP=103;FS=16.811;HRun=0;HaplotypeScore=25.4356;InbreedingCoeff=0.3295;MQ=94.67;MQ0=62;MQRankSum=-4.539;QD=12.78;ReadPosRankSum=-2.148;VQSLOD=1.8637;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,4:4:5.95:59,6,0	./.	0/0:18,0:7:12.42:0,12,62	0/0:22,0:7:20.44:0,20,135	./.	1/1:1,1:1:3.01:47,3,0	1/1:3,1:1:3.01:47,3,0	1/1:13,2:2:6.02:96,6,0	1/1:0,1:1:3.01:47,3,0	1/1:1,1:1:3.01:48,3,0	./.	1/1:1,2:2:6.02:94,6,0	1/1:0,2:2:6.02:91,6,0	1/1:0,1:1:3.01:45,3,0	1/1:0,1:1:3.01:47,3,0	1/1:0,1:1:2.88:15,3,0	./.	./.	1/1:7,1:1:3.01:48,3,0	./.	./.	./.	./.	./.	./.	1/1:2,2:1:3.01:48,3,0	./.	./.
chr10	4734470	.	AT	A	6989.97	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=18.336;DP=722;FS=0.000;HRun=4;HaplotypeScore=106.3563;InbreedingCoeff=0.9938;MQ=74.32;MQ0=0;MQRankSum=-0.883;QD=32.97;ReadPosRankSum=1.377;VQSLOD=4.5464;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:67,0:67:99:0,183,2426	0/0:6,0:6:15.05:0,15,209	0/0:14,0:14:36.08:0,36,458	0/0:20,0:20:42.10:0,42,535	0/0:22,0:22:66.20:0,66,890	0/0:17,0:17:48.15:0,48,646	0/0:34,0:34:93.23:0,93,1243	0/0:29,0:29:81.27:0,81,1134	0/0:24,0:24:72.24:0,72,1005	0/0:23,0:23:66.22:0,66,924	0/0:6,0:6:15:0,15,187	0/0:36,0:36:99:0,99,1346	0/0:36,0:36:99:0,102,1367	0/0:29,0:29:81.23:0,81,1110	1/1:0,40:40:99:1365,114,0	1/1:1,27:28:81.25:971,81,0	1/1:0,40:40:99:1258,105,0	1/1:0,29:29:84.26:1007,84,0	0/0:17,0:17:51.17:0,51,713	0/0:13,0:13:39.12:0,39,528	0/0:58,0:58:99:0,166,2286	0/0:17,0:17:45.15:0,45,630	0/0:8,0:8:21.07:0,21,289	0/0:34,0:34:84.28:0,84,1175	1/1:0,11:11:30.09:360,30,0	1/1:2,29:31:81.13:914,81,0	1/1:0,21:21:63.19:755,63,0	1/1:1,11:12:30.09:360,30,0
chr10	4736869	.	GGTGAAGAAATA	G	6180.44	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=10.604;DP=413;FS=24.647;HRun=0;HaplotypeScore=180.2725;InbreedingCoeff=0.9717;MQ=67.07;MQ0=0;MQRankSum=-9.132;QD=78.23;ReadPosRankSum=5.458;VQSLOD=2.7773;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:16:48.16:0,48,2762	0/0:8,0:8:21.07:0,21,1221	0/0:9,0:8:24.08:0,24,1172	0/0:12,0:11:30.10:0,30,1454	0/0:16,0:16:48.16:0,48,2502	0/0:10,0:10:30.10:0,30,1642	0/0:28,0:28:75.26:0,75,4274	0/0:17,0:17:51.18:0,51,2665	0/0:13,0:13:39.13:0,39,2188	0/0:20,0:20:60.21:0,60,3354	0/0:18,0:18:51.18:0,51,2826	0/0:13,0:13:36.12:0,36,2015	0/0:8,0:8:21.07:0,21,1040	0/0:19,0:19:48.16:0,48,2579	1/1:3,4:7:12.04:432,12,0	1/1:1,2:3:6.02:216,6,0	0/0:19,0:19:54.19:0,54,2907	1/1:3,10:13:30.10:1086,30,0	0/0:15,0:15:45.15:0,45,2036	0/0:11,0:11:30.10:0,30,1549	0/0:33,0:33:84.29:0,84,4823	0/0:14,0:14:39.13:0,39,2169	0/0:12,0:12:36.12:0,36,1947	0/0:22,0:22:51.17:0,51,2508	1/1:9,16:25:48.12:1591,48,0	1/1:1,12:13:33.11:1124,33,0	1/1:2,7:9:21.07:757,21,0	1/1:0,9:9:27.09:974,27,0
chr10	4737659	.	AC	A	8318.05	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=19.554;DP=750;FS=0.297;HRun=1;HaplotypeScore=113.1804;InbreedingCoeff=0.9899;MQ=74.96;MQ0=0;MQRankSum=-2.036;QD=37.30;ReadPosRankSum=6.434;VQSLOD=4.2255;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,117,1843	0/0:13,0:13:36.12:0,36,575	0/0:14,0:14:39.11:0,39,560	0/0:16,0:16:9.60:0,10,600	0/0:18,0:18:54.17:0,54,838	0/0:15,0:15:45.14:0,45,696	0/0:40,0:40:99:0,120,1893	0/0:23,0:23:69.23:0,69,1074	0/0:28,0:28:84.27:0,84,1319	0/0:32,0:32:93.28:0,93,1365	0/0:11,0:11:33.04:0,33,431	0/0:29,0:29:87.27:0,87,1331	0/0:24,0:24:72.23:0,72,1128	0/0:48,0:48:99:0,144,2267	1/1:0,33:33:90.30:1259,90,0	1/1:0,30:30:84.28:1175,84,0	1/1:0,49:49:99:1803,129,0	1/1:0,31:31:81.27:1133,81,0	0/0:22,0:22:63.20:0,63,973	0/0:21,0:21:63.20:0,63,982	0/0:65,0:65:99:0,190,2997	0/0:14,0:14:36.12:0,36,575	0/0:16,0:16:48.15:0,48,736	0/0:39,0:39:99:0,114,1796	1/1:0,15:15:39.13:545,39,0	1/1:1,38:39:63.35:1438,63,0	1/1:0,18:18:51.17:713,51,0	1/1:0,8:8:18.06:252,18,0
chr10	4738543	.	G	GAT	10686.83	PASS	AB=0.537;AC=19;AF=0.339;AN=56;BaseQRankSum=-9.305;DP=656;FS=23.022;HRun=0;HaplotypeScore=79.2068;InbreedingCoeff=0.9145;MQ=88.04;MQ0=0;MQRankSum=-7.766;QD=42.92;ReadPosRankSum=4.408;VQSLOD=3.8978;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,30:32:78.27:1429,78,0	0/0:12,0:12:33.10:0,33,455	0/0:17,0:17:51.17:0,51,726	0/0:30,0:30:87.29:0,87,1228	0/0:10,0:10:21.07:0,21,300	0/0:25,0:25:66.19:0,66,907	0/0:29,0:29:87.23:0,87,1171	1/1:3,27:30:81.26:1447,81,0	0/0:21,0:21:60.19:0,60,842	0/0:14,0:14:36.12:0,36,515	0/0:5,0:5:15.03:0,15,196	0/0:37,0:37:99:0,111,1584	0/0:19,0:19:57.19:0,57,813	0/0:37,0:37:99:0,105,1464	1/1:2,25:27:60.21:1100,60,0	1/1:0,21:22:51.17:935,51,0	1/1:1,35:37:87.30:1593,87,0	1/1:1,35:37:90.31:1650,90,0	0/0:19,0:19:41.93:0,42,570	0/0:6,0:6:18.06:0,18,253	0/0:65,0:65:99:0,181,2534	0/0:15,0:15:33.11:0,33,471	0/0:10,0:10:27.09:0,27,385	0/0:36,0:36:93.30:0,93,1309	1/1:0,13:13:27.09:495,27,0	0/1:3,18:22:62.81:889,0,63	1/1:1,18:19:45.15:825,45,0	1/1:2,8:10:18.06:325,18,0
chr10	4738934	.	G	GA	8541.09	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-9.036;DP=842;FS=0.922;HRun=4;HaplotypeScore=83.6986;InbreedingCoeff=0.9973;MQ=80.95;MQ0=0;MQRankSum=-1.490;QD=36.50;ReadPosRankSum=1.471;VQSLOD=4.7722;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,144,1595	0/0:5,0:5:15.04:0,15,170	0/0:22,0:22:48.10:0,48,515	0/0:25,0:24:50.23:0,50,573	0/0:29,0:29:87.25:0,87,986	0/0:20,0:20:57.14:0,57,628	0/0:39,0:39:99:0,105,1160	1/1:2,35:37:99:1389,105,0	0/0:22,0:22:63.16:0,63,704	0/0:26,0:26:69.20:0,69,782	0/0:20,0:20:57.16:0,57,646	0/0:39,0:39:99:0,111,1249	0/0:27,0:27:75.17:0,75,828	0/0:41,0:41:99:0,114,1274	1/1:2,32:34:81.27:1108,81,0	1/1:1,31:32:90.30:1230,90,0	0/0:50,0:50:99:0,141,1590	1/1:2,34:36:99:1354,99,0	0/0:15,0:15:45.10:0,45,493	0/0:21,0:21:57.14:0,57,637	0/0:67,0:67:99:0,184,2075	0/0:24,0:24:63.16:0,63,705	0/0:26,0:26:69.20:0,69,782	0/0:38,0:38:99:0,111,1248	1/1:1,16:17:39.13:532,39,0	1/1:2,33:35:76.98:1327,77,0	1/1:2,29:31:84.28:1149,84,0	1/1:0,12:12:33.11:451,33,0
chr10	4739369	.	GAAAA	G	2203.06	PASS	AB=0.770;AC=14;AF=0.250;AN=56;BaseQRankSum=8.233;DP=556;FS=8.346;HRun=10;HaplotypeScore=113.4849;InbreedingCoeff=0.7919;MQ=85.82;MQ0=2;MQRankSum=-5.329;QD=16.08;ReadPosRankSum=1.678;VQSLOD=0.8623;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:38.57:0,39,515	0/0:7,0:7:18.05:0,18,410	0/0:44,0:30:43.47:0,43,834	0/0:40,0:30:56.28:0,56,722	0/0:21,0:22:54.08:0,54,1103	0/0:14,0:14:36.12:0,36,919	0/0:16,0:17:51.16:0,51,1234	0/1:3,17:19:3.62:685,0,4	0/0:13,0:14:30.10:0,30,729	0/0:14,0:15:39.13:0,39,931	0/0:18,0:18:50.73:0,51,969	0/0:17,0:18:48.15:0,48,1117	0/0:13,0:13:36.12:0,36,856	0/0:23,0:26:69.24:0,69,1622	1/1:11,0:11:17.99:161,18,0	0/1:7,0:7:5:88,0,5	0/0:34,0:34:11.40:0,11,40	1/1:27,0:27:20.38:435,20,0	0/0:19,0:20:45.12:0,45,1020	0/0:14,0:16:42.14:0,42,898	0/0:22,0:21:60.19:0,60,1390	0/0:5,0:5:12.04:0,12,307	0/0:16,0:16:36.12:0,36,855	0/0:28,0:28:81.25:0,81,1889	1/1:14,0:14:26.93:223,27,0	1/1:24,0:24:8.80:236,9,0	1/1:19,0:19:17.41:358,17,0	1/1:15,0:15:1.18:197,1,0
chr10	4739376	.	AAAAC	A	4628.63	PASS	AB=1.000;AC=18;AF=0.321;AN=56;BaseQRankSum=9.653;DP=524;FS=2.898;HRun=0;HaplotypeScore=98.6673;InbreedingCoeff=0.8526;MQ=84.81;MQ0=2;MQRankSum=-4.485;QD=24.49;ReadPosRankSum=1.554;VQSLOD=4.8425;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:28:2.85:3,0,122	0/0:6,0:6:15.04:0,15,363	0/0:45,0:28:30.29:0,30,690	0/0:40,0:30:35.61:0,36,697	0/0:18,0:18:42.09:0,42,933	0/0:12,0:12:36.12:0,36,872	0/0:18,0:18:51.15:0,51,1168	0/1:22,0:21:45.59:360,0,46	0/0:12,0:12:33.10:0,33,719	0/0:14,0:14:39.11:0,39,880	0/0:17,0:17:29.76:0,30,774	0/0:15,0:15:45.15:0,45,1002	0/0:14,0:14:42.09:0,42,840	0/0:24,0:24:72.22:0,72,1548	1/1:0,9:9:18.06:310,18,0	1/1:0,7:7:12.04:190,12,0	1/1:33,0:33:69.04:663,69,0	1/1:2,26:28:60.08:954,60,0	0/0:18,0:18:51.15:0,51,1040	0/0:15,0:15:41.78:0,42,785	0/0:22,0:21:57.15:0,57,1257	0/0:7,0:7:21.04:0,21,410	0/0:12,0:12:36.11:0,36,777	0/0:26,0:26:75.24:0,75,1706	1/1:0,15:15:27.09:445,27,0	1/1:1,16:17:44.83:621,45,0	1/1:1,15:16:39.13:670,39,0	1/1:1,13:14:24.08:413,24,0
chr10	4739377	.	AAAC	A	3188.78	PASS	AB=0.968;AC=18;AF=0.321;AN=56;BaseQRankSum=11.547;DP=525;FS=4.868;HRun=0;HaplotypeScore=94.1141;InbreedingCoeff=0.8309;MQ=83.44;MQ0=2;MQRankSum=-4.272;QD=16.96;ReadPosRankSum=1.799;VQSLOD=3.3344;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:27,2:29:11.52:97,0,12	0/0:6,0:6:18.04:0,18,323	0/0:44,0:27:42.81:0,43,622	0/0:40,0:30:43.25:0,43,597	0/0:19,0:19:45.07:0,45,812	0/0:12,0:12:36.12:0,36,718	0/0:18,0:18:51.14:0,51,962	0/1:22,0:21:61.91:88,0,62	0/0:12,0:12:32.96:0,33,577	0/0:14,0:14:39.11:0,39,726	0/0:18,0:18:15.81:0,16,634	0/0:15,0:15:45.15:0,45,842	0/0:14,0:14:42.07:0,42,691	0/0:25,0:25:75.20:0,75,1297	1/1:9,0:9:18.04:179,18,0	1/1:7,0:7:11.86:103,12,0	1/1:0,32:32:69.18:1035,69,0	1/1:27,1:28:60:589,60,0	0/0:19,0:19:54.12:0,54,886	0/0:15,0:15:41.89:0,42,669	0/0:21,0:20:57.14:0,57,1041	0/0:7,0:7:21.04:0,21,336	0/0:12,0:12:36.12:0,36,658	0/0:26,0:26:78.23:0,78,1444	1/1:15,0:15:27.01:252,27,0	1/1:16,0:16:44.57:429,45,0	1/1:16,0:16:39.08:387,39,0	1/1:14,0:14:24.05:238,24,0
chr10	4739379	.	AC	A	1995.77	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=11.832;DP=521;FS=8.720;HRun=1;HaplotypeScore=79.6118;InbreedingCoeff=0.9151;MQ=82.18;MQ0=2;MQRankSum=-5.441;QD=10.67;ReadPosRankSum=1.951;VQSLOD=1.1864;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,24:29:36.81:394,37,0	0/0:6,0:6:18.04:0,18,207	0/0:41,3:27:18.99:0,19,404	0/0:37,0:28:34.32:0,34,353	0/0:16,0:16:45.07:0,45,515	0/0:12,0:12:36.11:0,36,440	0/0:17,0:17:51.01:0,51,590	0/1:23,0:22:10.53:11,0,129	0/0:12,0:12:22.69:0,23,342	0/0:13,0:13:38.98:0,39,446	0/0:18,0:18:20.10:0,20,424	0/0:15,0:15:44.93:0,45,500	0/0:15,0:15:45.06:0,45,480	0/0:25,0:25:69.87:0,70,768	1/1:9,0:9:17.65:108,18,0	1/1:7,0:7:11.42:63,11,0	1/1:32,0:32:68.23:455,68,0	1/1:27,0:27:58.32:354,58,0	0/0:21,0:21:62.98:0,63,660	0/0:15,0:15:37.99:0,38,422	0/0:21,0:20:44.31:0,44,620	0/0:7,0:7:21:0,21,215	0/0:13,0:13:39.04:0,39,428	0/0:26,0:26:78.18:0,78,901	1/1:15,0:15:26.31:158,26,0	1/1:16,0:16:44.29:287,44,0	1/1:15,1:16:38.28:236,38,0	1/1:13,0:13:23.54:144,24,0
chr10	4739506	.	C	CCAAAACAAAACAAAACAAAA	13690.07	PASS	AB=0.806;AC=16;AF=0.286;AN=56;BaseQRankSum=2.980;DP=589;FS=13.013;HRun=0;HaplotypeScore=289.1608;InbreedingCoeff=0.8184;MQ=67.57;MQ0=2;MQRankSum=-11.206;QD=61.95;ReadPosRankSum=-3.825;VQSLOD=2.4530;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:61.72:0,62,4328	0/0:12,0:12:24.08:0,24,1248	0/0:29,0:16:19.58:0,20,732	0/1:38,0:30:8.40:8,0,1084	0/0:13,0:12:33.11:0,33,1718	0/0:13,0:13:27.07:0,27,1115	0/0:18,0:18:48.15:0,48,2020	0/0:28,0:27:42.09:0,42,1279	0/0:19,0:19:48.16:0,48,2320	0/0:21,0:21:51.18:0,51,2527	0/0:10,0:10:24.07:0,24,961	0/0:29,0:29:63.22:0,63,2780	0/0:19,0:19:48.15:0,48,2162	0/0:17,0:17:39.13:0,39,1941	1/1:24,4:29:21.07:1658,21,0	1/1:8,0:15:21.07:1031,21,0	0/1:12,0:33:99:145,0,506	1/1:24,9:34:42.14:3257,42,0	0/0:18,0:17:30.09:0,30,1339	0/0:7,0:7:18.06:0,18,930	0/0:22,0:22:51.17:0,51,2503	0/0:10,0:10:15.05:0,15,801	0/0:10,0:10:18.05:0,18,772	0/0:39,0:39:87.21:0,87,3631	1/1:18,5:23:30.10:2316,30,0	1/1:27,5:33:51.17:3448,51,0	1/1:7,3:10:14.93:1143,15,0	1/1:5,1:6:12.04:684,12,0
chr10	4741718	.	CATCAATCAATCAATCA	C	1844.86	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.548;DP=745;FS=3.615;HRun=0;HaplotypeScore=342.5014;InbreedingCoeff=0.9894;MQ=62.97;MQ0=4;MQRankSum=-5.620;QD=36.17;ReadPosRankSum=0.069;VQSLOD=2.1184;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:18,33:51:45.15:1940,45,0	0/0:10,0:10:18.06:0,18,1222	0/0:26,0:23:45.15:0,45,2118	0/0:30,0:28:54.18:0,54,2566	0/0:30,0:30:72.25:0,72,4948	0/0:18,0:18:45.13:0,45,2521	0/0:32,0:32:75.26:0,75,5428	0/0:17,0:34:78.25:0,78,2109	0/0:31,0:31:75.24:0,75,5107	0/0:33,0:33:81.28:0,81,5841	0/0:19,0:19:42.14:0,42,2620	0/0:30,0:30:54.15:0,54,3469	0/0:22,0:22:48.16:0,48,3169	0/0:19,0:19:36.12:0,36,2646	0/0:31,0:31:72.25:0,72,2652	0/0:28,0:28:60.21:0,60,2262	0/0:30,0:30:81.22:0,81,5311	0/0:29,0:29:66.23:0,66,2463	0/0:33,0:31:51.13:0,51,3290	0/0:14,0:14:30.10:0,30,2174	0/0:33,0:33:66.23:0,66,4008	0/0:26,0:26:54.19:0,54,3683	0/0:21,0:21:51.17:0,51,3583	0/0:27,0:27:63.22:0,63,4608	0/0:30,0:30:57.19:0,57,2078	0/0:28,0:28:60.21:0,60,2588	0/0:21,0:21:54.19:0,54,2022	0/0:9,0:9:24.08:0,24,866
chr10	4741721	.	CAAT	C	3046.59	PASS	AB=0.726;AC=10;AF=0.179;AN=56;BaseQRankSum=17.095;DP=740;FS=15.506;HRun=0;HaplotypeScore=137.5321;InbreedingCoeff=0.2400;MQ=62.54;MQ0=4;MQRankSum=-2.235;QD=13.72;ReadPosRankSum=6.271;VQSLOD=2.2824;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:49,0:49:99:108,0,474	0/0:9,0:9:27.09:0,27,525	0/0:26,0:23:69.22:0,69,1042	0/0:31,0:30:80.90:0,81,1372	0/0:30,0:30:90.27:0,90,1806	0/0:20,0:20:60.20:0,60,1138	0/0:31,0:31:93.31:0,93,2000	0/0:33,0:33:33.44:0,33,738	0/0:28,0:28:81.28:0,81,1812	0/0:33,0:33:99:0,99,2101	0/0:22,0:22:60.16:0,60,1128	0/0:28,0:28:84.27:0,84,1606	0/0:22,0:22:63.21:0,63,1244	0/0:21,0:21:63.21:0,63,1263	1/1:8,22:30:16.65:677,17,0	0/1:18,12:30:99:481,0,160	0/0:32,0:32:95.04:0,95,1250	0/1:13,13:26:10.74:496,0,11	0/0:32,0:30:90.29:0,90,1644	0/0:14,0:14:39.10:0,39,802	0/0:31,0:31:87.28:0,87,1630	0/0:26,0:26:75.18:0,75,1447	0/0:21,0:21:63.19:0,63,1324	0/0:27,0:27:78.21:0,78,1678	0/1:14,16:30:99:427,0,136	0/1:15,10:25:99:362,0,255	0/1:8,14:22:4.18:440,0,4	1/1:3,7:10:0.08:201,0,0
chr10	4741725	.	CA	C	1117.68	PASS	AB=0.648;AC=7;AF=0.125;AN=56;BaseQRankSum=16.945;DP=722;FS=12.194;HRun=2;HaplotypeScore=115.0759;InbreedingCoeff=-0.1454;MQ=61.13;MQ0=5;MQRankSum=-2.018;QD=6.46;ReadPosRankSum=6.507;VQSLOD=-0.5842;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:9.24:0,9,477	0/0:9,0:9:27.09:0,27,398	0/0:28,0:25:75.25:0,75,1062	0/0:35,0:32:89.85:0,90,1249	0/0:30,0:30:87.28:0,87,1265	0/0:20,0:20:51.17:0,51,757	0/0:31,0:31:93.31:0,93,1376	0/0:27,0:27:35.05:0,35,662	0/0:29,0:29:87.28:0,87,1271	0/0:32,0:32:96.32:0,96,1408	0/0:21,0:21:60.20:0,60,883	0/0:26,0:26:72.24:0,72,1065	0/0:22,0:22:63.20:0,63,915	0/0:21,0:21:60.20:0,60,892	0/1:8,22:30:78.33:276,0,78	0/1:18,12:30:99:200,0,302	0/0:34,0:34:99:0,99,1351	0/1:15,13:28:99:219,0,122	0/0:30,0:28:84.28:0,84,1237	0/0:13,0:13:39.13:0,39,570	0/0:28,0:28:81.27:0,81,1195	0/0:23,0:23:69.18:0,69,983	0/0:20,0:20:57.19:0,57,848	0/0:25,0:25:75.21:0,75,1092	0/1:13,16:29:99:140,0,214	0/1:14,10:24:99:160,0,261	0/1:7,14:21:42.71:174,0,43	0/1:4,7:11:48.82:81,0,49
chr10	4742069	.	G	GCCCTT	14539.59	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-1.896;DP=697;FS=5.591;HRun=0;HaplotypeScore=130.1303;InbreedingCoeff=0.9713;MQ=77.48;MQ0=0;MQRankSum=-12.922;QD=70.24;ReadPosRankSum=-1.051;VQSLOD=6.1556;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:96.32:0,96,1924	0/0:13,0:13:36.11:0,36,705	0/0:18,0:18:41.90:0,42,753	0/0:17,0:17:19.21:0,19,655	0/0:27,0:27:78.27:0,78,1605	0/0:16,0:16:42.14:0,42,870	0/0:45,0:45:99:0,129,2560	1/1:9,18:27:81.28:2357,81,0	0/0:32,0:32:96.33:0,96,1974	0/0:13,0:13:36.12:0,36,746	0/0:14,0:14:33.11:0,33,684	0/0:27,0:27:81.26:0,81,1629	0/0:35,0:35:99:0,102,2062	0/0:31,0:31:87.30:0,87,1777	1/1:3,21:26:69.24:2062,69,0	1/1:3,23:28:66.23:1973,66,0	1/1:8,28:37:75.13:2030,75,0	1/1:4,15:22:42.12:1269,42,0	0/0:20,0:20:57.19:0,57,1118	0/0:12,0:12:33.09:0,33,609	0/0:60,0:60:99:0,169,3417	0/0:20,0:20:56.96:0,57,1142	0/0:17,0:17:45.15:0,45,932	0/0:40,0:40:99:0,117,2378	1/1:2,17:19:45.07:1169,45,0	1/1:2,18:22:66.20:1822,66,0	1/1:10,14:23:60.21:1766,60,0	1/1:1,1:2:3.01:92,3,0
chr10	4743472	.	ACCC	A	1271.34	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.576;DP=689;FS=3.421;HRun=6;HaplotypeScore=102.0891;InbreedingCoeff=0.9996;MQ=78.39;MQ0=0;MQRankSum=-5.637;QD=35.31;ReadPosRankSum=-3.302;VQSLOD=1.8943;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,126,2746	0/0:11,0:11:33.11:0,33,740	0/0:32,0:31:87.30:0,87,1894	0/0:25,0:25:63.94:0,64,1319	0/0:19,0:19:57.18:0,57,1240	0/0:20,0:20:57.20:0,57,1292	0/0:29,0:29:84.28:0,84,1860	1/1:7,29:36:87.27:1366,87,0	0/0:17,0:17:51.18:0,51,1156	0/0:34,0:34:99:0,99,2215	0/0:12,0:12:36.12:0,36,814	0/0:30,0:30:90.30:0,90,1998	0/0:21,0:21:57.20:0,57,1273	0/0:31,0:31:87.30:0,87,1950	0/0:30,0:30:90.31:0,90,2033	0/0:30,0:30:84.29:0,84,1905	0/0:23,0:23:69.24:0,69,1564	0/0:16,0:17:50.94:0,51,1056	0/0:24,0:24:63.21:0,63,1385	0/0:16,0:16:48.16:0,48,1077	0/0:31,0:31:90.31:0,90,2034	0/0:22,0:22:66.23:0,66,1466	0/0:21,0:21:63.22:0,63,1426	0/0:23,0:23:66.18:0,66,1448	0/0:35,0:35:99:0,99,2196	0/0:25,0:25:75.26:0,75,1688	0/0:16,0:16:48.15:0,48,1043	0/0:15,0:15:45.15:0,45,1019
chr10	4746028	.	T	TA	6875.20	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=17.015;DP=588;FS=3.984;HRun=3;HaplotypeScore=70.5278;InbreedingCoeff=0.9887;MQ=70.88;MQ0=0;MQRankSum=-0.377;QD=36.00;ReadPosRankSum=1.647;VQSLOD=5.5849;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,102,1208	0/0:10,0:10:30.09:0,30,360	0/0:12,0:12:36.08:0,36,402	0/0:6,0:5:8.40:0,8,64	0/0:19,0:19:54.07:0,54,619	0/0:20,0:20:57.16:0,57,674	0/0:16,0:16:48.14:0,48,565	0/0:33,0:33:87.25:0,87,1026	0/0:16,0:16:48.12:0,48,554	0/0:30,0:30:84.26:0,84,1007	0/0:20,0:20:55.97:0,56,641	0/0:25,0:25:66.18:0,66,776	0/0:20,0:20:60.18:0,60,719	0/0:16,0:16:48.15:0,48,572	1/1:1,21:22:51.17:713,51,0	1/1:2,22:24:60.20:840,60,0	1/1:0,16:16:39.13:546,39,0	1/1:0,27:27:66.22:923,66,0	0/0:24,0:24:72.18:0,72,830	0/0:29,0:29:81.24:0,81,959	0/0:18,0:18:54.17:0,54,647	0/0:10,0:10:27.06:0,27,302	0/0:21,0:21:63.18:0,63,742	0/0:16,0:16:48.13:0,48,564	1/1:0,31:31:87.29:1217,87,0	1/1:4,27:31:81.24:1111,81,0	1/1:2,18:21:54.11:728,54,0	1/1:0,19:19:57.19:797,57,0
chr10	4746336	.	AG	A	6255.36	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=14.997;DP=690;FS=1.883;HRun=2;HaplotypeScore=73.6146;InbreedingCoeff=0.9999;MQ=80.34;MQ0=0;MQRankSum=-4.153;QD=35.74;ReadPosRankSum=3.809;VQSLOD=5.5191;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,123,1798	0/0:14,0:14:42.14:0,42,629	0/0:28,0:28:66.13:0,66,888	0/0:26,0:26:74.58:0,75,1039	0/0:21,0:21:60.20:0,60,899	0/0:18,0:18:54.17:0,54,787	0/0:25,0:25:72.24:0,72,1079	0/0:31,0:31:90.30:0,90,1348	0/0:24,1:25:30.27:0,30,950	0/0:32,0:32:96.33:0,96,1439	0/0:14,0:14:39.13:0,39,584	0/0:28,0:28:81.26:0,81,1192	0/0:19,0:19:57.19:0,57,853	0/0:21,0:21:60.20:0,60,899	1/1:0,22:22:54.18:701,54,0	1/1:1,23:24:63.20:818,63,0	0/0:40,0:40:99:0,120,1799	1/1:0,33:33:90.29:1169,90,0	0/0:17,0:16:45.15:0,45,674	0/0:18,0:18:51.17:0,51,761	0/0:34,0:34:99:0,102,1508	0/0:18,0:18:54.17:0,54,789	0/0:22,0:22:63.21:0,63,935	0/0:22,0:22:63.17:0,63,919	1/1:0,21:21:60.20:779,60,0	1/1:0,26:26:78.23:997,78,0	1/1:0,26:26:72.23:935,72,0	1/1:0,23:23:66.21:857,66,0
chr10	4748274	.	T	TAC	1430.55	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.832;DP=1045;FS=1.433;HRun=0;HaplotypeScore=136.1758;InbreedingCoeff=0.9991;MQ=66.22;MQ0=0;MQRankSum=-4.225;QD=34.06;ReadPosRankSum=-4.260;VQSLOD=4.3613;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:66.14:0,66,826	0/0:17,0:17:51.15:0,51,649	0/0:36,0:32:66.19:0,66,825	0/0:26,0:26:57.37:0,57,696	0/0:31,0:31:84.27:0,84,1093	0/0:18,0:18:51.15:0,51,647	0/0:39,0:39:99:0,108,1374	1/1:14,28:42:93.31:1525,93,0	0/0:34,0:34:99:0,99,1257	0/0:61,0:61:99:0,172,2211	0/0:27,0:27:72.22:0,72,922	0/0:64,0:64:99:0,181,2296	0/0:43,0:43:99:0,117,1487	0/0:41,0:41:99:0,114,1482	0/0:55,0:55:99:0,147,1867	0/0:61,0:61:99:0,172,2190	0/0:29,0:29:78.22:0,78,984	0/0:20,0:20:27.91:0,28,520	0/0:35,0:35:88.13:0,88,1082	0/0:28,0:28:66.21:0,66,858	0/0:70,0:70:99:0,166,2128	0/0:26,0:26:66.21:0,66,858	0/0:27,0:27:63.20:0,63,815	0/0:53,0:53:99:0,126,1621	0/0:24,0:24:63.20:0,63,819	0/0:44,0:44:99:0,120,1561	0/0:25,0:25:69.21:0,69,881	0/0:17,0:17:45.07:0,45,524
chr10	4748304	.	CACACAT	C	1030.32	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.729;DP=1164;FS=1.757;HRun=0;HaplotypeScore=241.7311;InbreedingCoeff=0.9961;MQ=57.65;MQ0=9;MQRankSum=-6.913;QD=18.40;ReadPosRankSum=-4.348;VQSLOD=2.6598;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:14,42:56:60.29:1125,60,0	0/0:18,0:18:45.15:0,45,1396	0/0:53,0:35:58.90:0,59,1515	0/0:57,0:41:80.59:0,81,2089	0/0:30,0:30:72.23:0,72,2213	0/0:25,0:25:69.24:0,69,2230	0/0:44,0:44:99:0,108,3273	0/0:35,0:35:81.08:0,81,2163	0/0:41,0:41:99:0,114,3522	0/0:72,0:72:99:0,205,6242	0/0:23,0:23:60.21:0,60,1915	0/0:68,0:68:99:0,178,5625	0/0:52,0:52:99:0,132,4304	0/0:46,0:46:99:0,120,3637	0/0:59,0:59:99:0,163,5012	0/0:56,0:56:99:0,138,3912	0/0:32,0:32:81.20:0,81,2321	0/0:21,0:21:21.26:0,21,1543	0/0:26,0:26:57.17:0,57,1605	0/0:27,0:27:66.18:0,66,1901	0/0:81,0:80:99:0,187,6008	0/0:36,0:36:89.94:0,90,2932	0/0:24,0:24:60.19:0,60,1823	0/0:59,0:59:99:0,157,4871	0/0:28,0:28:84.25:0,84,2450	0/0:51,0:51:99:0,138,4450	0/0:27,0:27:75.21:0,75,2174	0/0:17,0:17:48.16:0,48,1596
chr10	4748452	.	TAC	T	2167.45	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=9.327;DP=1418;FS=18.904;HRun=0;HaplotypeScore=160.9830;InbreedingCoeff=0.9997;MQ=61.62;MQ0=26;MQRankSum=1.259;QD=37.37;ReadPosRankSum=-5.182;VQSLOD=1.9167;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:57:99:0,105,1810	0/0:18,0:18:48.11:0,48,818	0/0:104,0:23:63.05:0,63,925	0/0:105,1:28:66.92:0,67,982	0/0:27,0:27:78.27:0,78,1364	0/0:24,0:24:72.23:0,72,1236	0/0:42,0:42:99:0,114,2007	1/1:3,55:58:99:2262,166,0	0/0:62,0:62:99:0,169,2967	0/0:52,0:52:99:0,144,2494	0/0:16,0:16:48.16:0,48,834	0/0:81,0:81:99:0,204,3987	0/0:75,0:75:99:0,208,3649	0/0:54,0:54:99:0,150,2591	0/0:100,0:100:99:0,292,4985	0/0:93,0:93:99:0,247,4320	0/0:29,0:29:74.84:0,75,1266	0/0:30,0:30:84.29:0,84,1473	0/0:25,0:23:66.18:0,66,1066	0/0:26,0:26:72.25:0,72,1271	0/0:121,0:121:99:0,318,5443	0/0:29,0:29:81.25:0,81,1380	0/0:23,0:23:66.23:0,66,1150	0/0:40,0:40:99:0,99,1731	0/0:27,0:27:75.24:0,75,1303	0/0:54,0:54:99:0,154,2671	0/0:32,0:32:96.31:0,96,1620	0/0:12,0:12:33.09:0,33,547
chr10	4749222	.	A	AGCTGGCCTCTGGACAAGGCTCGACTG	43974.73	PASS	AB=0.889;AC=54;AF=0.964;AN=56;BaseQRankSum=-1.501;DP=305;FS=9.443;HRun=0;HaplotypeScore=356.1691;InbreedingCoeff=-0.0408;MQ=60.19;MQ0=0;MQRankSum=-1.599;QD=144.18;ReadPosRankSum=1.345;VQSLOD=3.6379;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:14:34.72:1740,35,0	1/1:9,0:9:23.42:988,23,0	1/1:4,1:6:4.16:567,4,0	0/1:5,0:7:9.35:435,0,9	1/1:14,0:14:30.10:2270,30,0	1/1:5,0:5:8.72:513,9,0	1/1:12,0:12:30.09:2051,30,0	1/1:12,0:12:30.10:2010,30,0	1/1:11,0:11:18.87:847,19,0	1/1:12,0:12:34.93:2392,35,0	1/1:11,0:11:19.88:1150,20,0	1/1:20,0:20:40.04:2267,40,0	1/1:12,0:12:31.21:1635,31,0	1/1:10,0:10:19.62:1507,20,0	1/1:7,0:7:18.05:1288,18,0	1/1:13,0:13:31.66:2226,32,0	1/1:11,0:11:17.93:1017,18,0	0/1:4,0:4:4.42:133,0,4	1/1:5,0:5:12.04:880,12,0	1/1:19,0:19:51.16:3413,51,0	1/1:11,0:11:18.53:1248,19,0	1/1:10,0:10:27.08:1657,27,0	1/1:13,0:13:26.11:1684,26,0	1/1:11,0:11:21.07:1872,21,0	1/1:16,0:16:42.14:3084,42,0	1/1:13,0:13:36.12:2617,36,0	1/1:10,0:10:30.09:1782,30,0	1/1:7,0:7:19.86:702,20,0
chr10	4750021	.	G	GA	1893.81	PASS	AB=0.828;AC=21;AF=0.375;AN=56;BaseQRankSum=-4.069;DP=566;FS=4.963;HRun=14;HaplotypeScore=80.6450;InbreedingCoeff=0.3805;MQ=72.17;MQ0=7;MQRankSum=-1.107;QD=7.01;ReadPosRankSum=-0.408;VQSLOD=2.7197;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:15,8:23:39.33:312,39,0	0/0:4,0:4:5.85:0,6,38	0/0:41,0:26:1.77:0,2,81	0/0:26,0:16:13.34:0,13,94	0/0:21,0:21:1.66:0,2,134	0/0:28,1:30:35.22:0,35,247	0/0:23,0:25:52.08:0,52,331	1/1:22,12:33:59.10:505,59,0	0/1:17,4:21:67.08:67,0,132	0/0:20,1:21:1.56:0,2,119	0/0:17,0:17:26.37:0,26,172	0/0:11,0:11:20.43:0,20,127	0/0:15,1:16:4.88:0,5,147	0/0:21,0:21:35.29:0,35,230	1/1:6,18:23:21:184,21,0	1/1:9,15:23:16.72:271,17,0	0/1:20,1:22:4.47:4,0,193	0/1:4,13:18:18.32:132,0,18	0/0:17,0:18:1.56:0,2,115	0/0:11,0:11:3.56:0,4,35	0/1:11,1:13:3.82:4,0,91	0/1:13,1:14:8.74:9,0,77	0/1:11,1:12:6.58:7,0,93	0/0:29,3:32:20.17:0,20,372	0/1:6,8:14:2.18:91,0,2	1/1:15,8:23:16.56:254,17,0	1/1:3,12:17:20.45:156,20,0	1/1:4,6:9:9:79,9,0
chr10	4750141	.	ACCTGGTCACATAG	A	9291.29	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=13.686;DP=560;FS=17.215;HRun=0;HaplotypeScore=197.5314;InbreedingCoeff=0.9640;MQ=60.70;MQ0=0;MQRankSum=-13.353;QD=76.79;ReadPosRankSum=1.308;VQSLOD=3.2818;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,132,8026	0/0:9,0:9:27.08:0,27,1463	0/0:13,0:13:36.12:0,36,1981	0/0:10,0:10:27.09:0,27,1468	0/0:26,0:26:75.23:0,75,4390	0/0:17,0:17:48.15:0,48,2923	0/0:33,0:33:96.30:0,96,5356	0/0:22,0:22:66.22:0,66,4053	0/0:23,0:23:69.24:0,69,4353	0/0:27,0:27:78.27:0,78,4922	0/0:12,0:12:36.12:0,36,2151	0/0:17,0:17:45.14:0,45,2608	0/0:17,0:17:51.18:0,51,3111	0/0:19,0:19:54.19:0,54,3338	1/1:1,30:31:54.19:2174,54,0	1/1:0,27:27:45.15:1812,45,0	0/0:28,0:28:81.25:0,81,4456	1/1:4,4:8:14.97:404,15,0	0/0:10,0:10:30.10:0,30,1596	0/0:16,0:16:48.16:0,48,3162	0/0:29,0:29:81.26:0,81,5118	0/0:16,0:16:45.14:0,45,2581	0/0:20,0:20:57.20:0,57,3693	0/0:28,0:28:78.27:0,78,5088	1/1:0,14:14:30.10:1208,30,0	1/1:1,22:23:63.13:2244,63,0	1/1:1,14:15:36.12:1429,36,0	1/1:3,0:3:2.96:19,3,0
chr10	4750221	.	A	AGGAG	2270.80	PASS	AB=0.792;AC=11;AF=0.204;AN=54;BaseQRankSum=3.101;DP=424;FS=2.154;HRun=0;HaplotypeScore=93.9429;InbreedingCoeff=0.8037;MQ=64.68;MQ0=6;MQRankSum=-1.214;QD=23.65;ReadPosRankSum=0.957;VQSLOD=3.0551;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:31:39.61:0,40,509	0/0:3,0:3:9.02:0,9,123	0/0:22,0:17:15:0,15,186	0/0:27,0:18:3.01:0,3,36	0/0:13,0:13:30.09:0,30,466	0/0:13,0:13:24.08:0,24,393	0/0:27,0:25:45.06:0,45,559	0/0:25,0:22:36.05:0,36,435	0/0:19,0:17:38.97:0,39,520	0/0:18,0:18:32.21:0,32,510	0/0:7,0:7:15.01:0,15,170	0/0:12,0:12:27.07:0,27,398	0/0:11,0:11:24.07:0,24,361	0/0:15,0:15:29.75:0,30,438	1/1:19,3:21:21.06:444,21,0	0/1:14,5:17:25.01:493,0,25	0/0:11,0:10:11.06:0,11,140	1/1:8,0:8:14.63:165,15,0	0/0:11,0:11:14.98:0,15,188	0/0:10,0:10:21.04:0,21,308	0/0:22,0:19:39.08:0,39,537	0/0:6,0:6:12.03:0,12,172	0/0:12,0:12:18.05:0,18,271	0/0:11,0:11:18.03:0,18,246	1/1:7,2:9:15.04:294,15,0	1/1:17,3:19:30.03:624,30,0	1/1:15,3:18:23.97:425,24,0	./.
chr10	4750269	.	G	GGGAA	4710.52	PASS	AB=0.889;AC=15;AF=0.278;AN=54;BaseQRankSum=2.128;DP=503;FS=11.417;HRun=0;HaplotypeScore=75.8705;InbreedingCoeff=0.8639;MQ=51.03;MQ0=43;MQRankSum=0.356;QD=32.26;ReadPosRankSum=-0.924;VQSLOD=3.6211;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:72.13:0,72,1148	0/0:7,0:5:12.04:0,12,185	./.	0/0:6,0:3:5.98:0,6,64	0/0:15,0:15:39.10:0,39,589	0/0:20,0:17:36.12:0,36,586	0/0:30,0:24:60.10:0,60,869	0/0:30,0:21:47.56:0,48,569	0/0:27,0:23:57.16:0,57,896	0/0:14,0:12:24.08:0,24,382	0/0:10,0:10:17.89:0,18,305	0/0:22,0:21:51.15:0,51,824	0/0:23,0:20:45.14:0,45,719	0/0:20,0:18:48.13:0,48,750	1/1:18,7:22:48.10:971,48,0	1/1:22,5:22:48.05:894,48,0	1/1:5,13:16:0.41:16,0,0	0/1:14,2:13:0.16:538,0,0	0/0:16,0:9:27.07:0,27,411	0/0:15,0:13:30.09:0,30,462	0/0:37,0:32:84.25:0,84,1306	0/0:10,0:9:24.05:0,24,357	0/0:10,0:10:21.06:0,21,311	0/0:13,0:12:30.10:0,30,500	1/1:9,3:10:24.08:511,24,0	1/1:21,3:19:42.09:755,42,0	1/1:8,6:15:42.10:877,42,0	1/1:1,6:7:6.02:150,6,0
chr10	4751248	.	CA	C	9432.38	PASS	AB=0.982;AC=53;AF=0.946;AN=56;BaseQRankSum=3.577;DP=666;FS=1.283;HRun=1;HaplotypeScore=233.6829;InbreedingCoeff=-0.0795;MQ=52.67;MQ0=0;MQRankSum=-5.931;QD=14.16;ReadPosRankSum=9.355;VQSLOD=3.9322;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:36,0:36:21.38:414,0,21	1/1:17,0:17:1.35:237,1,0	0/1:17,1:18:36.23:36,0,42	0/1:15,0:15:22.95:25,0,23	1/1:12,0:12:4.71:165,5,0	1/1:23,0:23:40.69:360,41,0	1/1:23,0:23:35.81:310,36,0	1/1:35,0:35:4.61:369,5,0	1/1:31,0:31:62.07:502,62,0	1/1:25,0:25:33.28:367,33,0	1/1:18,1:19:50.25:355,50,0	1/1:42,1:43:73.56:717,74,0	1/1:30,1:31:90.80:590,91,0	1/1:40,0:40:92.34:669,92,0	1/1:28,0:28:64.70:504,65,0	1/1:33,0:33:90.37:547,90,0	1/1:14,0:14:17.28:181,17,0	1/1:23,0:23:7.44:183,7,0	1/1:24,0:24:19.04:282,19,0	1/1:19,0:19:24.29:272,24,0	1/1:20,0:20:43.44:266,43,0	1/1:28,0:28:31.25:418,31,0	1/1:22,0:22:61.81:399,62,0	1/1:20,0:20:24.45:255,24,0	1/1:20,0:20:30.25:302,30,0	1/1:19,0:19:31.08:273,31,0	1/1:20,0:20:10.87:289,11,0	1/1:8,0:8:23.52:145,24,0
chr10	4753701	.	GAAGA	G	688.94	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.283;DP=690;FS=0.000;HRun=0;HaplotypeScore=88.6559;InbreedingCoeff=0.7704;MQ=49.39;MQ0=80;MQRankSum=2.251;QD=28.71;ReadPosRankSum=1.497;VQSLOD=3.4609;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:40:99:0,105,2739	0/0:6,0:6:18.06:0,18,480	0/0:34,0:5:5.76:0,6,61	0/0:20,0:1:3.01:0,3,42	0/0:30,0:30:81.28:0,81,2116	0/0:22,0:21:51.09:0,51,1239	0/0:31,0:25:69.20:0,69,1694	0/0:19,0:11:30.10:0,30,772	0/0:28,0:26:69.24:0,69,1839	0/0:25,0:25:69.24:0,69,1842	0/0:19,0:19:45.15:0,45,1146	0/0:25,0:25:51.18:0,51,1360	0/0:27,0:25:54.19:0,54,1440	0/0:19,0:18:36.12:0,36,958	0/0:26,0:26:57.16:0,57,1456	0/0:27,0:24:57.20:0,57,1519	1/1:3,21:22:42.14:784,42,0	0/0:35,0:35:72.21:0,72,1833	0/0:20,0:10:30.10:0,30,800	0/0:17,0:17:51.18:0,51,1323	0/0:39,0:34:81.28:0,81,2146	0/0:24,0:24:47.89:0,48,1266	0/0:18,0:18:42.14:0,42,1114	0/0:20,0:19:54.14:0,54,1381	0/0:20,0:19:54.17:0,54,1434	0/0:39,0:37:99:0,111,2950	0/0:19,0:16:42.14:0,42,1120	0/0:15,0:15:36.08:0,36,793
chr10	4756271	.	GCAGGATCTTAAGAGCCTTTTA	G	1149.60	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.755;DP=645;FS=2.454;HRun=0;HaplotypeScore=341.7911;InbreedingCoeff=0.9977;MQ=84.73;MQ0=0;MQRankSum=0.586;QD=45.98;ReadPosRankSum=-2.614;VQSLOD=1.6478;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,126,11210	0/0:14,0:14:42.14:0,42,4103	0/0:15,0:15:42.14:0,42,2262	0/0:24,0:24:66.19:0,66,3672	0/0:16,0:16:45.15:0,45,3712	0/0:19,0:19:57.20:0,57,4635	0/0:20,0:20:54.17:0,54,4546	1/1:13,12:25:36.11:1244,36,0	0/0:28,0:28:84.29:0,84,6848	0/0:28,0:28:84.28:0,84,6192	0/0:20,0:20:60.19:0,60,4483	0/0:29,0:29:84.27:0,84,7555	0/0:29,0:29:84.29:0,84,7210	0/0:21,0:21:60.21:0,60,5339	0/0:22,0:22:66.21:0,66,5715	0/0:32,0:32:93.32:0,93,8686	0/0:21,0:21:63.22:0,63,5432	0/0:13,0:13:39.11:0,39,3295	0/0:23,0:23:69.17:0,69,4471	0/0:18,0:18:51.16:0,51,4200	0/0:36,0:36:99:0,102,7888	0/0:26,0:26:78.27:0,78,6875	0/0:31,0:31:87.27:0,87,6949	0/0:15,0:15:45.15:0,45,4042	0/0:26,0:26:78.27:0,78,6582	0/0:21,0:21:63.22:0,63,5449	0/0:21,0:20:60.21:0,60,5319	0/0:8,0:8:24.08:0,24,2085
chr10	4757445	.	T	TG	983.96	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-5.270;DP=708;FS=1.765;HRun=1;HaplotypeScore=70.2198;InbreedingCoeff=0.9966;MQ=77.90;MQ0=0;MQRankSum=-1.539;QD=35.14;ReadPosRankSum=0.384;VQSLOD=3.5899;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,105,1297	0/0:9,0:9:27.09:0,27,351	0/0:26,0:26:78.22:0,78,956	0/0:11,0:11:33.10:0,33,407	0/0:25,0:25:75.23:0,75,959	0/0:19,0:19:51.17:0,51,662	0/0:25,0:25:57.18:0,57,739	0/0:44,0:44:99:0,126,1632	0/0:29,0:29:78.23:0,78,996	0/0:29,0:29:81.26:0,81,1052	0/0:27,0:27:81.25:0,81,1037	0/0:32,0:32:90.29:0,90,1167	0/0:29,0:29:84.27:0,84,1088	0/0:24,0:24:60.15:0,60,736	0/0:30,0:30:84.22:0,84,1057	0/0:37,0:37:99:0,99,1271	1/1:0,28:28:72.24:1079,72,0	0/0:27,0:27:75.18:0,75,937	0/0:24,0:24:72.23:0,72,935	0/0:30,0:30:84.27:0,84,1090	0/0:23,0:23:69.21:0,69,881	0/0:8,0:8:24.08:0,24,312	0/0:22,0:22:63.19:0,63,801	0/0:23,0:22:69.20:0,69,878	0/0:20,0:20:57.19:0,57,740	0/0:37,0:37:99:0,108,1403	0/0:17,0:17:51.12:0,51,642	0/0:12,0:12:36.12:0,36,467
chr10	4759107	.	G	GAAA	1415.98	PASS	AB=0.915;AC=15;AF=0.268;AN=56;BaseQRankSum=2.334;DP=672;FS=0.000;HRun=15;HaplotypeScore=86.0297;InbreedingCoeff=0.5989;MQ=45.10;MQ0=72;MQRankSum=-0.226;QD=8.14;ReadPosRankSum=-0.237;VQSLOD=-0.1740;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:30:22.36:0,22,268	0/0:8,0:5:11.77:0,12,92	0/0:55,0:9:7.06:0,7,92	0/0:55,0:10:2.80:0,3,13	0/0:20,0:17:5.66:0,6,83	0/0:16,0:17:32.92:0,33,309	0/0:23,0:21:30.88:0,31,319	0/0:28,0:41:52.56:0,53,281	0/0:15,0:12:29.62:0,30,263	0/0:27,0:24:37.23:0,37,341	0/1:9,0:9:14:14,0,21	0/0:27,0:22:38.90:0,39,361	0/0:10,0:8:11.81:0,12,105	0/0:22,0:20:26.53:0,27,236	1/1:8,7:13:9.89:127,10,0	0/0:14,0:13:0.37:0,0,72	0/0:17,0:17:8.52:0,9,63	1/1:16,3:15:20.79:235,21,0	0/1:15,0:12:6.15:6,0,98	0/0:29,0:27:33.56:0,34,366	0/0:10,0:8:14.24:0,14,129	0/1:15,0:16:7.70:8,0,117	0/0:26,0:24:30.37:0,30,288	0/0:29,0:22:35.61:0,36,321	1/1:6,14:23:15.61:209,16,0	1/1:15,11:24:37.35:447,37,0	1/1:23,4:26:39.61:506,40,0	1/1:11,0:6:3.48:41,3,0
chr10	4759291	.	TAC	T	368.24	PASS	AB=0.916;AC=14;AF=0.269;AN=52;BaseQRankSum=1.634;DP=546;FS=4.713;HRun=0;HaplotypeScore=98.0001;InbreedingCoeff=-0.2237;MQ=63.64;MQ0=2;MQRankSum=1.810;QD=1.33;ReadPosRankSum=1.175;VQSLOD=1.6263;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:32:2.84:14,3,0	./.	./.	0/0:33,0:23:3.01:0,3,41	0/1:15,1:17:23.34:23,0,228	0/1:18,0:18:0.60:1,0,251	0/1:28,1:29:9.70:10,0,417	0/0:18,0:35:8.68:0,9,51	0/1:6,2:8:24.24:24,0,81	0/0:17,1:17:2.55:0,3,165	0/1:11,1:12:9.21:9,0,252	0/0:16,0:16:27.08:0,27,388	0/1:12,0:12:18.23:18,0,151	0/0:10,0:10:18.04:0,18,250	0/0:19,0:26:23.79:0,24,219	0/1:16,1:18:18.33:18,0,78	0/1:11,10:19:5.01:239,0,5	0/0:16,0:21:21.54:0,22,152	0/1:23,1:23:15.23:15,0,189	0/0:15,0:15:10:0,10,274	0/1:32,4:36:78.96:79,0,520	0/0:10,0:10:3.01:0,3,45	0/1:14,1:15:28.38:28,0,187	0/1:30,1:31:29.02:29,0,342	0/0:11,0:17:23.01:0,23,198	0/0:16,0:23:50.65:0,51,485	0/0:13,0:16:8.95:0,9,69	0/0:7,0:7:8.39:0,8,95
chr10	4759343	.	TACACACACAC	T	897.53	PASS	AB=0.659;AC=10;AF=0.185;AN=54;BaseQRankSum=2.728;DP=728;FS=3.429;HRun=0;HaplotypeScore=194.0128;InbreedingCoeff=0.6943;MQ=47.04;MQ0=50;MQRankSum=-3.797;QD=9.07;ReadPosRankSum=0.677;VQSLOD=2.4674;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:37:42.08:0,42,1228	0/0:4,0:4:9.03:0,9,344	0/0:55,0:7:9.87:0,10,192	0/0:60,0:4:9.03:0,9,119	0/0:22,0:21:42.14:0,42,1495	0/0:20,0:20:42.14:0,42,1413	0/0:41,0:41:75.26:0,75,2638	0/0:52,0:46:66.15:0,66,1244	0/0:21,0:22:42.12:0,42,1494	0/0:23,0:22:52.41:0,52,1678	0/0:13,0:13:24.08:0,24,863	0/0:23,0:23:45.15:0,45,1643	0/0:21,0:22:57.20:0,57,2079	0/0:17,0:16:33.11:0,33,1037	./.	1/1:6,18:22:5.32:129,5,0	0/0:20,0:20:29.01:0,29,368	0/1:8,7:15:37.54:173,0,38	0/0:18,0:14:29.31:0,29,685	0/0:15,0:15:33.11:0,33,1017	0/0:53,0:55:83.83:0,84,2454	0/0:14,0:13:24.08:0,24,762	0/0:22,0:23:48.16:0,48,1765	0/0:32,0:34:69.24:0,69,2380	0/1:9,12:21:0:0,0,0	1/1:17,2:19:16.39:322,16,0	1/1:6,11:17:12.04:359,12,0	1/1:2,1:3:1.06:56,1,0
chr10	4759913	.	GT	G	182.26	PASS	AB=0.913;AC=9;AF=0.161;AN=56;BaseQRankSum=-0.795;DP=569;FS=0.000;HRun=16;HaplotypeScore=145.0172;InbreedingCoeff=0.0833;MQ=59.32;MQ0=9;MQRankSum=0.523;QD=1.16;ReadPosRankSum=3.875;VQSLOD=-0.5605;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:18,9:31:41.45:216,41,0	0/0:2,0:2:5.96:0,6,44	0/0:44,0:21:18.31:0,18,112	0/0:41,0:19:1.81:0,2,20	0/0:20,3:24:24.36:0,24,297	0/1:11,1:12:28.60:29,0,79	0/0:16,1:17:2.98:0,3,127	0/0:32,0:34:12.06:0,12,115	0/0:7,0:8:7.31:0,7,62	0/0:25,1:28:27.15:0,27,311	0/0:11,0:12:7.79:0,8,115	0/1:19,1:20:10.21:10,0,119	0/1:21,1:21:0.19:0,0,94	0/0:11,1:15:5.70:0,6,165	0/0:21,0:22:34.77:0,35,191	0/0:22,0:23:32.56:0,33,171	0/1:11,0:14:5.99:12,0,6	0/0:13,0:14:19.13:0,19,104	0/1:20,2:21:2.78:3,0,171	0/0:15,1:17:11.78:0,12,193	0/0:17,0:16:17.92:0,18,139	0/1:17,3:20:36:36,0,159	0/1:14,1:15:4.09:4,0,160	0/0:11,0:12:13.21:0,13,97	0/0:23,0:26:35.43:0,35,204	0/0:24,0:24:29.31:0,29,136	0/0:21,0:20:13.73:0,14,118	0/0:9,0:7:7.16:0,7,41
chr10	4759924	.	T	TG	469.78	PASS	AB=0.740;AC=2;AF=0.036;AN=56;BaseQRankSum=1.107;DP=587;FS=0.679;HRun=0;HaplotypeScore=119.9275;InbreedingCoeff=-0.0433;MQ=56.46;MQ0=17;MQRankSum=-1.122;QD=9.79;ReadPosRankSum=0.196;VQSLOD=3.5733;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:34:69.07:0,69,629	0/0:4,0:4:12.01:0,12,109	0/0:51,0:15:24.82:0,25,161	0/0:46,0:13:4.26:0,4,55	0/0:24,0:24:68.10:0,68,691	0/0:13,0:13:32.99:0,33,338	0/0:15,0:15:39.03:0,39,398	0/1:17,13:29:41.58:542,0,42	0/0:7,0:6:15.89:0,16,166	0/0:30,0:30:78.56:0,79,866	0/0:15,0:14:39.50:0,39,416	0/0:21,0:21:45.15:0,45,449	0/0:16,0:15:34.20:0,34,296	0/0:16,0:16:30.67:0,31,368	0/0:23,0:22:49.52:0,50,360	0/0:19,0:19:49.57:0,50,387	0/1:13,0:17:11.70:12,0,126	0/0:14,0:14:32.23:0,32,222	0/0:21,0:19:57:0,57,557	0/0:20,0:20:55.83:0,56,529	0/0:13,0:12:31.50:0,32,284	0/0:14,0:14:42.01:0,42,431	0/0:21,0:21:53.97:0,54,540	0/0:12,0:12:15.80:0,16,198	0/0:26,0:26:52.97:0,53,365	0/0:27,0:26:58.63:0,59,437	0/0:21,0:20:40.28:0,40,325	0/0:15,0:12:26.92:0,27,217
chr10	4759935	.	TGG	T	2358.67	PASS	AB=0.939;AC=15;AF=0.268;AN=56;BaseQRankSum=5.057;DP=576;FS=0.000;HRun=2;HaplotypeScore=116.5754;InbreedingCoeff=0.2803;MQ=49.00;MQ0=20;MQRankSum=-5.726;QD=8.42;ReadPosRankSum=0.273;VQSLOD=0.2818;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:38:51.09:0,51,515	0/0:4,0:4:12.04:0,12,191	0/1:43,0:9:18.95:19,0,115	0/1:44,0:7:10.03:10,0,14	0/0:22,0:22:53.46:0,53,746	0/0:10,0:10:16.06:0,16,282	0/0:15,0:15:42.11:0,42,552	0/1:24,3:26:47.08:372,0,47	0/0:8,0:7:14.54:0,15,205	0/0:27,0:27:71.70:0,72,963	0/0:12,0:11:27.70:0,28,423	0/0:19,0:19:44.42:0,44,585	0/0:15,0:14:34.77:0,35,463	0/0:16,0:16:38.71:0,39,481	0/1:21,2:23:57.03:220,0,57	0/1:18,0:19:21.25:318,0,21	0/1:16,0:15:28.84:84,0,29	1/1:14,0:15:27.78:255,28,0	0/0:22,0:18:33.52:0,34,732	0/0:21,1:23:61.51:0,62,885	0/0:13,0:11:33.09:0,33,474	0/0:14,0:14:42.02:0,42,580	0/0:24,0:24:63.10:0,63,873	0/0:13,0:13:34.49:0,34,430	1/1:28,1:29:9.08:414,9,0	1/1:21,5:26:8.10:404,8,0	0/1:16,3:20:37.58:227,0,38	1/1:14,2:13:0.73:203,1,0
chr10	4759936	.	GGT	G	3195.04	PASS	AB=0.827;AC=14;AF=0.250;AN=56;BaseQRankSum=3.129;DP=576;FS=0.783;HRun=0;HaplotypeScore=113.4307;InbreedingCoeff=0.2460;MQ=49.00;MQ0=20;MQRankSum=-5.433;QD=11.62;ReadPosRankSum=0.083;VQSLOD=2.9673;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:38,0:37:92.35:92,0,132	0/0:4,0:4:12.04:0,12,231	0/1:43,0:9:11.67:12,0,45	0/0:44,0:7:0.42:0,0,24	0/0:22,0:22:33.31:0,33,755	0/0:10,0:10:8.54:0,9,326	0/0:14,0:14:39.07:0,39,560	0/1:27,0:26:67.56:68,0,114	0/0:8,0:7:4.22:0,4,227	0/0:28,0:28:69.25:0,69,964	0/0:13,0:12:26.49:0,26,455	0/0:18,0:18:43.62:0,44,646	0/0:15,0:14:33.82:0,34,513	0/0:16,0:16:22.16:0,22,492	0/1:11,14:24:61.75:328,0,62	0/1:11,8:20:24.62:530,0,25	0/1:16,0:15:42.05:47,0,42	1/1:4,11:15:25.25:346,25,0	0/0:22,0:18:47.59:0,48,779	0/0:24,0:24:68.44:0,68,1021	0/0:13,0:11:32.90:0,33,548	0/0:14,0:14:41.66:0,42,621	0/0:23,0:23:62.94:0,63,940	0/0:13,0:13:35.39:0,35,478	0/1:7,21:29:0.19:688,0,0	1/1:10,16:25:18.68:608,19,0	0/1:12,7:20:71.61:262,0,72	1/1:7,9:13:27.34:384,27,0
chr10	4759937	.	GTT	G	1785.15	PASS	AB=0.936;AC=13;AF=0.232;AN=56;BaseQRankSum=3.377;DP=580;FS=23.365;HRun=13;HaplotypeScore=119.1817;InbreedingCoeff=0.2276;MQ=49.03;MQ0=21;MQRankSum=-5.122;QD=7.17;ReadPosRankSum=-0.922;VQSLOD=-0.4372;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:12,23:35:12.27:331,0,12	0/0:4,0:4:12.04:0,12,174	1/1:41,0:8:5.55:30,6,0	0/0:46,0:8:3.83:0,4,67	0/0:20,0:21:46.89:0,47,547	0/0:10,0:10:21.01:0,21,258	0/0:12,0:14:35.52:0,36,399	0/0:28,0:27:25.39:0,25,169	0/0:8,0:7:15.05:0,15,194	0/0:27,0:27:54.04:0,54,649	0/0:13,0:12:26.98:0,27,351	0/0:17,0:18:39.08:0,39,498	0/0:15,0:14:32.53:0,33,398	0/0:15,0:16:40.30:0,40,444	0/1:26,0:25:89.46:143,0,89	0/1:19,0:20:31.07:239,0,31	1/1:12,6:16:4.92:189,5,0	0/1:16,0:16:10.38:145,0,10	0/0:21,0:18:40.65:0,41,527	0/0:24,0:26:68.14:0,68,849	0/0:12,0:11:29.46:0,29,384	0/0:13,0:14:38.44:0,38,458	0/0:21,0:23:53.60:0,54,664	0/0:12,0:13:26.66:0,27,311	0/1:29,0:29:41.07:316,0,41	0/1:26,0:25:24.92:262,0,25	0/1:20,0:20:92.34:92,0,111	1/1:15,1:13:17.21:197,17,0
chr10	4759947	.	TTTTGTTTTTTG	T	806.02	PASS	AB=0.950;AC=3;AF=0.054;AN=56;BaseQRankSum=3.430;DP=568;FS=5.116;HRun=0;HaplotypeScore=200.7517;InbreedingCoeff=0.5215;MQ=49.29;MQ0=18;MQRankSum=-1.365;QD=15.80;ReadPosRankSum=-5.156;VQSLOD=0.3047;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:39.07:0,39,1031	0/0:4,0:4:12.04:0,12,546	0/0:34,0:6:5.90:0,6,189	0/0:44,0:8:6.02:0,6,265	0/0:20,0:20:21.47:0,21,914	0/0:11,0:11:24.06:0,24,843	0/0:14,0:14:29.98:0,30,867	1/1:12,20:31:15.38:845,15,0	0/0:7,0:6:18.03:0,18,577	0/0:24,0:24:14.53:0,15,1094	0/0:15,0:14:39.12:0,39,1462	0/0:17,0:17:31.07:0,31,1263	0/0:15,0:14:24.93:0,25,1398	0/0:18,0:18:41.47:0,41,1404	0/0:26,0:25:48.60:0,49,1402	0/0:20,0:20:57.01:0,57,1672	0/1:18,0:18:62.77:63,0,131	0/0:17,0:17:32.98:0,33,880	0/0:20,0:17:48.86:0,49,1174	0/0:27,0:27:71.95:0,72,2443	0/0:12,0:11:31.32:0,31,1067	0/0:15,0:15:41.04:0,41,1344	0/0:21,0:21:57.11:0,57,2117	0/0:10,0:10:16.63:0,17,731	0/0:28,0:28:63.14:0,63,1967	0/0:28,0:27:49.37:0,49,1393	0/0:18,0:18:39.11:0,39,763	0/0:18,0:15:38.99:0,39,1265
chr10	4759951	.	GTT	G	243.03	PASS	AB=0.968;AC=4;AF=0.071;AN=56;BaseQRankSum=5.139;DP=548;FS=0.000;HRun=13;HaplotypeScore=116.2933;InbreedingCoeff=0.5001;MQ=48.75;MQ0=17;MQRankSum=-5.638;QD=3.04;ReadPosRankSum=-0.527;VQSLOD=0.0241;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:35.57:0,36,240	0/0:4,0:4:12.04:0,12,209	0/1:29,1:5:1.89:2,0,86	0/0:39,0:8:14.62:0,15,179	0/0:18,0:18:41.96:0,42,524	0/0:10,0:10:24.04:0,24,361	0/0:12,0:12:30.08:0,30,458	0/1:30,1:31:58.18:58,0,130	0/0:8,0:7:21.07:0,21,317	0/0:22,0:22:42.23:0,42,610	0/0:17,0:16:48.13:0,48,712	0/0:15,0:15:36:0,36,543	0/0:14,0:13:35.93:0,36,536	0/0:19,0:19:43.83:0,44,635	0/0:25,0:24:48.29:0,48,432	0/0:22,0:22:55.57:0,56,511	1/1:9,10:18:20.82:289,21,0	0/0:17,0:17:20.03:0,20,226	0/0:20,0:17:47.14:0,47,654	0/0:24,0:24:66.22:0,66,1110	0/0:12,0:11:30.57:0,31,515	0/0:15,0:15:42.02:0,42,615	0/0:22,0:22:56.28:0,56,870	0/0:11,0:11:26.72:0,27,372	0/0:26,0:26:62.56:0,63,476	0/0:27,0:26:56.13:0,56,467	0/0:20,0:20:28.15:0,28,296	0/0:17,0:15:38.62:0,39,396
chr10	4761650	.	AC	A	1378.91	PASS	AB=0.873;AC=6;AF=0.107;AN=56;BaseQRankSum=9.955;DP=593;FS=24.873;HRun=1;HaplotypeScore=66.7264;InbreedingCoeff=0.6491;MQ=65.99;MQ0=0;MQRankSum=0.751;QD=16.61;ReadPosRankSum=-5.172;VQSLOD=1.3358;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:56.89:0,57,642	0/0:8,0:8:24.06:0,24,288	0/1:9,2:9:30.53:31,0,90	0/1:8,1:7:6.85:7,0,34	0/0:32,0:32:69.35:0,69,1066	0/0:28,0:28:81.09:0,81,939	0/0:15,0:15:45.12:0,45,540	1/1:42,0:42:99:741,115,0	0/0:16,0:16:47.35:0,47,555	0/0:28,0:28:79.93:0,80,941	0/0:20,0:20:40.86:0,41,621	0/0:17,0:17:48.05:0,48,560	0/0:27,0:27:69.56:0,70,881	0/0:18,0:18:54.17:0,54,677	0/0:16,0:16:48.10:0,48,562	0/0:17,0:17:47.50:0,47,549	1/1:5,16:21:62.91:735,63,0	0/0:19,0:19:54.16:0,54,672	0/0:31,0:31:93.12:0,93,1061	0/0:26,0:26:74.96:0,75,867	0/0:13,0:13:38.58:0,39,389	0/0:19,0:19:57.16:0,57,690	0/0:15,0:15:43.92:0,44,502	0/0:9,0:9:27.09:0,27,338	0/0:35,0:35:99:0,102,1194	0/0:21,0:21:63.01:0,63,667	0/0:40,0:40:99:0,114,1346	0/0:18,0:18:44.50:0,45,482
chr10	4762404	.	GGACA	G	1289.27	PASS	AB=0.993;AC=9;AF=0.161;AN=56;BaseQRankSum=5.328;DP=756;FS=3.736;HRun=0;HaplotypeScore=134.1194;InbreedingCoeff=0.3242;MQ=56.64;MQ0=5;MQRankSum=-2.386;QD=6.93;ReadPosRankSum=-6.512;VQSLOD=0.2935;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:45:99:0,129,2857	0/0:20,0:20:54.02:0,54,1147	0/0:26,0:22:53.67:0,54,800	0/0:17,0:15:16.38:0,16,329	0/0:17,0:17:48.04:0,48,935	0/0:26,0:26:65.83:0,66,1218	0/0:35,0:35:99:0,99,1997	1/1:5,23:28:62.85:746,63,0	0/0:35,0:35:92.78:0,93,1560	0/0:21,0:21:48.14:0,48,926	0/0:10,0:9:23.93:0,24,368	0/0:38,0:38:99:0,108,2420	0/0:21,0:21:53.94:0,54,1072	0/0:40,0:40:98.74:0,99,1842	0/1:45,0:45:57.56:58,0,1379	0/0:30,0:30:6.27:0,6,957	1/1:5,29:31:27.09:490,27,0	0/1:24,0:24:16.86:17,0,744	0/0:33,0:30:78.18:0,78,1436	0/0:17,0:17:48.14:0,48,1066	0/0:55,0:54:99:0,153,3077	0/0:13,0:13:38.99:0,39,639	0/0:14,0:14:36.03:0,36,617	0/0:36,0:36:99:0,99,2334	0/0:20,0:20:51.13:0,51,781	0/1:25,1:26:78.23:78,0,755	0/1:21,0:21:33.34:33,0,629	0/1:8,0:8:19.91:20,0,291
chr10	4765769	.	AG	A	1635.46	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=11.028;DP=710;FS=9.968;HRun=7;HaplotypeScore=74.8718;InbreedingCoeff=0.9986;MQ=81.57;MQ0=0;MQRankSum=-0.006;QD=25.55;ReadPosRankSum=-0.939;VQSLOD=3.4373;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,114,1414	0/0:8,0:8:24.06:0,24,289	0/0:23,0:23:66.19:0,66,806	0/0:20,0:20:42.13:0,42,518	0/0:18,0:18:45.14:0,45,566	0/0:21,0:21:63.17:0,63,766	0/0:28,0:28:81.26:0,81,1019	1/1:4,29:33:87.16:870,87,0	0/0:26,0:26:69.20:0,69,843	0/0:31,0:31:84.26:0,84,1046	0/0:15,0:15:45.14:0,45,564	0/0:29,0:29:83.92:0,84,1025	0/0:24,0:24:69.21:0,69,855	0/0:23,0:23:59.84:0,60,729	0/0:38,0:38:99:0,105,1308	0/0:38,0:38:99:0,108,1334	1/1:0,31:31:87.20:887,87,0	0/0:19,0:19:51.16:0,51,642	0/0:23,0:23:69.22:0,69,861	0/0:22,0:22:60.17:0,60,728	0/0:52,0:52:99:0,153,1811	0/0:27,0:27:72.21:0,72,881	0/0:22,0:22:60.18:0,60,740	0/0:23,0:23:57.13:0,57,686	0/0:23,0:23:60.18:0,60,744	0/0:19,0:19:54.16:0,54,657	0/0:24,0:24:54.14:0,54,646	0/0:10,0:10:30.10:0,30,377
chr10	4767524	.	TAA	T	1156.14	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=2.773;DP=447;FS=17.518;HRun=9;HaplotypeScore=71.0752;InbreedingCoeff=0.8948;MQ=63.67;MQ0=6;MQRankSum=0.014;QD=21.41;ReadPosRankSum=-0.966;VQSLOD=0.8375;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,23:25:42.12:488,42,0	0/0:2,0:2:6.02:0,6,98	0/0:23,0:10:27.06:0,27,366	0/0:10,0:7:9.17:0,9,129	0/0:20,0:20:60.20:0,60,960	0/0:17,0:17:48.13:0,48,700	0/0:11,0:11:30.09:0,30,461	1/1:4,24:28:75.12:790,75,0	0/0:13,0:13:30.05:0,30,419	0/0:30,0:29:76.44:0,76,1181	0/0:16,0:16:39.11:0,39,586	0/0:13,0:13:30.08:0,30,447	0/0:10,0:11:32.60:0,33,501	0/0:5,0:5:15.03:0,15,201	0/0:14,0:14:23.84:0,24,173	0/0:3,0:12:14.97:0,15,53	0/0:2,0:25:48.08:0,48,463	0/0:24,0:24:59.36:0,59,404	0/0:21,0:20:54.16:0,54,836	0/0:16,0:16:39.12:0,39,618	0/0:7,0:7:18.06:0,18,295	0/0:7,0:7:18.06:0,18,295	0/0:9,0:9:27.09:0,27,442	0/0:8,0:8:21.03:0,21,315	0/0:11,0:11:20.73:0,21,142	0/0:32,0:32:85.33:0,85,655	0/0:21,0:21:44.08:0,44,295	0/0:15,0:14:29.76:0,30,212
chr10	4767533	.	AG	A	3833.41	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=8.168;DP=475;FS=0.869;HRun=1;HaplotypeScore=57.5150;InbreedingCoeff=0.8785;MQ=71.11;MQ0=3;MQRankSum=3.006;QD=23.96;ReadPosRankSum=3.207;VQSLOD=3.7277;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:40.76:0,41,197	0/0:2,0:2:6.02:0,6,84	0/0:25,0:14:10.06:0,10,322	0/0:12,0:10:4.23:0,4,113	0/0:23,0:23:66.16:0,66,862	0/0:16,0:16:44.99:0,45,575	0/0:13,0:13:39.08:0,39,475	0/0:34,0:33:58.55:0,59,353	0/0:11,0:11:27.01:0,27,336	0/0:28,0:28:78.20:0,78,1039	0/0:14,0:14:39.09:0,39,506	0/0:12,0:12:30.05:0,30,384	0/0:12,0:12:30.89:0,31,437	0/0:6,0:6:15.02:0,15,175	1/1:0,15:15:24.08:334,24,0	0/1:12,0:12:4.18:4,0,59	1/1:26,0:26:48.98:274,49,0	1/1:0,28:28:60.20:833,60,0	0/0:25,0:25:65.64:0,66,819	0/0:13,0:13:39.10:0,39,524	0/0:17,0:17:50.97:0,51,515	0/0:8,0:8:21.04:0,21,273	0/0:12,0:12:36.07:0,36,448	0/0:7,0:7:21:0,21,269	1/1:0,10:10:21.07:291,21,0	1/1:2,30:32:33.61:1098,34,0	1/1:1,25:26:45.10:624,45,0	1/1:0,11:11:27.09:375,27,0
chr10	4767887	.	TGGGCAGGGCA	T	758.43	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=3.452;DP=458;FS=3.608;HRun=0;HaplotypeScore=127.7695;InbreedingCoeff=0.6061;MQ=78.42;MQ0=4;MQRankSum=-0.983;QD=18.06;ReadPosRankSum=-1.359;VQSLOD=2.4982;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:15:24.03:316,24,0	0/0:4,0:4:5.99:0,6,72	0/0:21,0:12:6.02:0,6,113	0/0:39,0:26:7.42:0,7,248	0/0:9,0:9:14.99:0,15,249	0/0:10,0:10:16.85:0,17,310	0/0:39,0:39:78.02:0,78,1667	0/0:11,0:11:8.74:0,9,64	0/0:13,0:13:30.04:0,30,861	0/0:12,0:12:15.04:0,15,435	0/0:8,0:8:6.01:0,6,75	0/0:28,0:28:45.05:0,45,1445	0/0:22,0:22:28.59:0,29,728	0/0:32,0:32:66.08:0,66,2245	0/0:14,0:14:30.01:0,30,695	0/0:17,0:17:27.08:0,27,855	1/1:7,20:27:18.27:560,18,0	0/0:14,0:14:21.05:0,21,843	0/0:7,0:7:3.01:0,3,55	0/0:7,0:7:9.03:0,9,150	0/0:33,0:32:48.01:0,48,946	0/0:7,0:7:3:0,3,25	0/0:7,0:6:15:0,15,220	0/0:27,0:27:63.09:0,63,1865	0/0:3,0:3:6.01:0,6,78	0/0:16,0:16:21.06:0,21,529	0/0:6,0:6:8.39:0,8,158	0/0:8,0:8:18.04:0,18,675
chr10	4768109	.	AGACCCAG	A	696.16	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.225;DP=640;FS=2.817;HRun=0;HaplotypeScore=144.0747;InbreedingCoeff=0.9922;MQ=80.51;MQ0=0;MQRankSum=-4.586;QD=27.85;ReadPosRankSum=0.816;VQSLOD=3.5042;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,132,5140	0/0:7,0:7:21.07:0,21,843	0/0:20,0:20:44.54:0,45,1375	0/0:14,0:14:39.60:0,40,1121	0/0:16,0:16:48.16:0,48,1865	0/0:14,0:14:42.14:0,42,1696	0/0:35,0:35:99:0,102,4059	0/0:22,0:22:60.21:0,60,2343	0/0:22,0:22:63.22:0,63,2477	0/0:21,0:21:60.19:0,60,2206	0/0:14,0:14:42.14:0,42,1575	0/0:36,0:36:99:0,105,4117	0/0:26,0:26:78.27:0,78,2999	0/0:28,0:28:81.28:0,81,3269	0/0:28,0:28:81.28:0,81,3254	0/0:28,0:28:84.29:0,84,3287	1/1:6,19:25:30.10:791,30,0	0/0:20,0:20:57.20:0,57,2193	0/0:16,0:16:45.15:0,45,1743	0/0:15,0:15:42.14:0,42,1696	0/0:58,0:58:99:0,175,6862	0/0:10,0:10:27.05:0,27,937	0/0:9,0:9:24.08:0,24,960	0/0:24,0:24:72.25:0,72,2834	0/0:19,0:19:57.20:0,57,2302	0/0:32,0:32:87.27:0,87,3316	0/0:23,0:23:69.24:0,69,2776	0/0:13,0:13:39.13:0,39,1566
chr10	4768472	.	GCA	G	4299.02	PASS	AB=0.929;AC=13;AF=0.232;AN=56;BaseQRankSum=10.448;DP=825;FS=7.170;HRun=0;HaplotypeScore=109.9251;InbreedingCoeff=0.9095;MQ=70.74;MQ0=2;MQRankSum=0.682;QD=26.87;ReadPosRankSum=3.836;VQSLOD=6.2729;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:90.31:0,90,1478	0/0:15,0:15:42.14:0,42,681	0/0:31,0:27:53.85:0,54,748	0/0:27,0:24:45.32:0,45,616	0/0:32,1:33:55.78:0,56,1436	0/1:12,1:13:7.43:7,0,416	0/0:37,1:38:49.76:0,50,1336	0/0:39,0:39:87.24:0,87,1369	0/0:19,1:20:17.48:0,17,747	0/0:27,0:27:66.21:0,66,1031	0/0:14,0:14:36.11:0,36,569	0/0:49,0:49:99:0,138,2259	0/0:26,0:26:72.23:0,72,1153	0/0:34,0:34:87.21:0,87,1397	1/1:9,34:44:87.28:1089,87,0	0/0:10,0:37:96.03:0,96,908	0/0:41,0:41:99:0,114,1870	1/1:0,24:25:69.05:840,69,0	0/0:29,0:29:72.25:0,72,1177	0/0:26,0:26:72.25:0,72,1176	0/0:69,0:69:99:0,180,2964	0/0:17,0:17:39.12:0,39,617	0/0:18,0:18:48.16:0,48,788	0/0:34,0:35:93.31:0,93,1508	1/1:2,16:18:47.98:577,48,0	1/1:3,28:31:84.25:1036,84,0	1/1:0,17:17:45.14:563,45,0	1/1:4,7:11:15.05:188,15,0
chr10	4768681	.	AC	A	1112.39	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.980;DP=859;FS=5.585;HRun=2;HaplotypeScore=77.7820;InbreedingCoeff=0.9959;MQ=86.27;MQ0=0;MQRankSum=-2.564;QD=34.76;ReadPosRankSum=1.824;VQSLOD=4.2224;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:57:99:0,166,2439	0/0:8,0:8:24.08:0,24,360	0/0:23,0:24:72.21:0,72,1050	0/0:32,0:32:96.29:0,96,1373	0/0:30,0:30:90.25:0,90,1288	0/0:20,0:20:60.20:0,60,897	0/0:39,0:39:99:0,117,1714	0/0:36,0:35:99:0,105,1535	0/0:35,0:35:99:0,105,1533	0/0:38,0:38:99:0,114,1687	0/0:13,0:13:39.13:0,39,583	0/0:26,0:26:75.25:0,75,1103	0/0:36,0:36:99:0,102,1528	0/0:38,0:38:99:0,114,1706	0/0:49,0:49:99:0,147,2197	0/0:47,0:47:99:0,141,2109	1/1:0,32:32:93.30:1207,93,0	0/0:17,0:17:51.17:0,51,764	0/0:29,0:29:87.29:0,87,1300	0/0:22,0:22:66.22:0,66,986	0/0:61,0:61:99:0,181,2568	0/0:24,0:24:66.20:0,66,948	0/0:22,0:22:63.20:0,63,924	0/0:30,0:30:87.29:0,87,1304	0/0:27,0:27:78.26:0,78,1169	0/0:33,0:33:96.30:0,96,1401	0/0:26,0:26:78.25:0,78,1147	0/0:8,0:8:24.08:0,24,359
chr10	4769224	.	A	AACACAC	3190.22	PASS	AB=0.836;AC=20;AF=0.357;AN=56;BaseQRankSum=7.210;DP=694;FS=2.104;HRun=0;HaplotypeScore=157.7138;InbreedingCoeff=0.6694;MQ=59.16;MQ0=21;MQRankSum=-7.912;QD=9.41;ReadPosRankSum=-4.816;VQSLOD=1.1244;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:14,16:31:41.93:490,0,42	0/0:10,0:10:24.08:0,24,503	0/1:52,0:14:6.15:6,0,73	0/1:40,0:22:20.92:21,0,82	0/0:18,0:20:41.70:0,42,664	0/0:18,0:18:18.16:0,18,459	0/0:24,0:24:57.17:0,57,1046	0/1:22,0:38:52.84:120,0,53	0/0:19,0:20:48.14:0,48,876	0/0:16,0:17:35.70:0,36,609	0/0:11,0:11:20.64:0,21,314	0/0:19,0:19:25.07:0,25,622	0/0:18,0:19:36.12:0,36,729	0/0:20,0:20:32.94:0,33,614	1/1:25,0:25:18.43:166,18,0	1/1:13,3:27:33.06:757,33,0	1/1:14,6:29:35.99:709,36,0	1/1:12,0:12:12.01:250,12,0	0/0:20,0:18:39.41:0,39,648	0/0:19,0:21:45.08:0,45,762	0/0:54,0:58:99:0,101,2042	0/0:21,0:26:33.99:0,34,695	0/0:16,0:17:41.89:0,42,686	0/0:32,0:33:43.26:0,43,1155	1/1:15,0:15:6.02:86,6,0	1/1:25,0:24:10.71:321,11,0	1/1:21,0:21:17.71:127,18,0	1/1:21,0:21:39.58:340,40,0
chr10	4769946	.	C	CA	5996.10	PASS	AB=0.549;AC=11;AF=0.196;AN=56;BaseQRankSum=15.723;DP=737;FS=12.272;HRun=0;HaplotypeScore=87.1619;InbreedingCoeff=0.8866;MQ=81.37;MQ0=0;MQRankSum=-1.556;QD=38.19;ReadPosRankSum=2.088;VQSLOD=4.2658;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,100,1651	0/0:10,0:10:27.09:0,27,377	0/0:23,0:23:48.07:0,48,696	0/0:20,0:20:42.04:0,42,605	0/0:24,0:24:72.22:0,72,986	0/0:23,0:23:66.22:0,66,921	0/0:24,0:24:72.22:0,72,977	0/0:25,0:25:66.21:0,66,909	0/0:27,0:27:81.23:0,81,1079	0/0:31,0:31:87.29:0,87,1214	0/0:23,0:23:69.22:0,69,945	0/0:25,0:25:72.20:0,72,952	0/0:21,0:21:60.19:0,60,822	0/0:28,0:28:84.27:0,84,1153	1/1:1,36:37:93.31:1394,93,0	0/0:38,0:38:99:0,111,1531	0/0:45,0:45:99:0,135,1878	1/1:0,21:21:57.12:833,57,0	0/0:26,0:26:78.26:0,78,1090	0/0:15,0:15:42.13:0,42,568	0/0:39,0:39:99:0,111,1549	0/0:27,0:27:75.16:0,75,981	0/0:13,0:13:39.13:0,39,542	0/0:30,0:30:87.29:0,87,1213	1/1:0,18:18:45.15:671,45,0	0/1:4,23:28:44.58:893,0,45	1/1:1,41:41:99:1708,114,0	1/1:0,11:11:33.11:496,33,0
chr10	4771172	.	C	CA	3041.34	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-2.304;DP=338;FS=1.055;HRun=1;HaplotypeScore=45.2867;InbreedingCoeff=0.9018;MQ=76.73;MQ0=0;MQRankSum=-0.992;QD=36.64;ReadPosRankSum=2.157;VQSLOD=3.7572;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:63.21:0,63,878	0/0:3,0:3:9.03:0,9,126	0/0:8,0:8:15:0,15,186	0/0:8,0:8:11.98:0,12,132	0/0:7,0:7:18.03:0,18,216	0/0:10,0:10:30.10:0,30,418	0/0:31,0:31:93.31:0,93,1299	0/0:15,0:15:36.11:0,36,488	0/0:7,0:7:21.07:0,21,293	0/0:11,0:11:33.11:0,33,461	0/0:2,0:2:3.01:0,3,41	0/0:6,0:6:18.06:0,18,251	0/0:9,0:9:24.08:0,24,330	0/0:11,0:11:33.10:0,33,443	1/1:3,8:11:26.98:409,27,0	1/1:0,8:8:21.07:336,21,0	0/0:29,0:29:87.22:0,87,1169	1/1:0,26:26:72.25:1151,72,0	0/0:14,0:14:33.07:0,33,438	0/0:5,0:5:15.05:0,15,208	0/0:29,0:29:84.25:0,84,1154	0/0:4,0:4:12.04:0,12,168	0/0:6,0:6:15.05:0,15,210	0/0:18,0:18:51.17:0,51,709	1/1:2,11:13:24.54:384,25,0	1/1:1,12:13:33.09:472,33,0	1/1:0,10:10:27.09:432,27,0	1/1:1,1:2:3.01:48,3,0
chr10	4771262	.	AAAAT	A	5531.09	PASS	AB=0.514;AC=13;AF=0.232;AN=56;BaseQRankSum=12.310;DP=520;FS=0.000;HRun=0;HaplotypeScore=99.5098;InbreedingCoeff=0.8927;MQ=78.70;MQ0=0;MQRankSum=-0.870;QD=47.27;ReadPosRankSum=1.845;VQSLOD=5.5782;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:81.28:0,81,1987	0/0:8,0:8:24.08:0,24,624	0/0:16,0:15:30.08:0,30,675	0/0:12,0:11:21.07:0,21,484	0/0:29,0:29:87.30:0,87,2186	0/0:22,0:20:63.22:0,63,1630	0/0:17,0:17:45.15:0,45,1142	0/0:22,0:22:66.23:0,66,1682	0/0:12,0:12:33.11:0,33,857	0/0:24,0:24:69.24:0,69,1779	0/0:19,0:19:54.18:0,54,1355	0/0:24,0:24:69.24:0,69,1793	0/0:14,0:14:39.12:0,39,954	0/0:16,0:16:48.15:0,48,1155	1/1:1,28:29:72.25:1289,72,0	0/1:1,17:18:23.79:863,0,24	0/0:28,0:28:78.27:0,78,1918	1/1:0,17:17:42.11:722,42,0	0/0:14,0:14:39.12:0,39,914	0/0:19,0:19:48.15:0,48,1193	0/0:18,0:18:54.19:0,54,1362	0/0:20,0:20:57.20:0,57,1481	0/0:20,0:20:57.20:0,57,1480	0/0:20,0:20:60.21:0,60,1533	1/1:4,8:12:33.09:560,33,0	1/1:0,24:24:69.24:1240,69,0	1/1:1,12:13:36.12:644,36,0	1/1:0,4:4:12.04:214,12,0
chr10	4771642	.	C	CAT	823.89	PASS	AB=0.964;AC=10;AF=0.179;AN=56;BaseQRankSum=4.740;DP=627;FS=11.890;HRun=0;HaplotypeScore=97.2002;InbreedingCoeff=-0.2131;MQ=54.95;MQ0=13;MQRankSum=-0.444;QD=3.98;ReadPosRankSum=1.991;VQSLOD=1.6213;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:40,0:40:99:279,0,172	0/0:10,0:9:26.98:0,27,338	0/0:33,0:13:31.16:0,31,286	0/0:37,0:18:50.78:0,51,530	0/0:35,0:35:98.55:0,99,1137	0/0:19,0:19:51.04:0,51,614	0/0:19,0:19:45.03:0,45,553	0/1:23,0:23:32.49:32,0,417	0/0:17,0:17:45.04:0,45,590	0/0:34,0:34:99:0,102,1212	0/0:17,0:17:38.88:0,39,419	0/0:21,0:21:53.73:0,54,685	0/0:15,0:15:42.09:0,42,574	0/0:21,0:21:60.07:0,60,777	0/1:18,0:18:45.43:62,0,45	0/1:18,0:18:53.02:78,0,53	0/1:28,0:27:99:145,0,312	0/1:8,9:18:64.83:65,0,67	0/0:14,0:12:29.72:0,30,295	0/0:22,0:22:59.91:0,60,697	0/0:22,0:22:54:0,54,658	0/0:24,0:24:54.07:0,54,691	0/0:28,0:28:72.07:0,72,921	0/0:32,0:32:93.06:0,93,1206	0/1:8,0:8:12.88:13,0,19	0/1:23,0:22:97.64:98,0,178	0/1:21,0:21:26.29:134,0,26	0/1:10,0:9:59.43:63,0,59
chr10	4771993	.	G	GA	470.13	PASS	AC=2;AF=0.037;AN=54;BaseQRankSum=1.111;DP=519;FS=4.817;HRun=7;HaplotypeScore=91.3428;InbreedingCoeff=0.8079;MQ=46.39;MQ0=20;MQRankSum=-1.654;QD=16.79;ReadPosRankSum=-0.760;VQSLOD=3.3961;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:23:47.29:0,47,441	0/0:10,0:10:11.96:0,12,106	0/0:1,0:1:3:0,3,28	./.	0/0:21,0:19:42.04:0,42,400	0/0:15,0:14:33.05:0,33,317	0/0:23,0:23:42:0,42,399	0/0:20,0:19:36:0,36,347	0/0:17,0:16:33.02:0,33,312	0/0:22,0:20:42.04:0,42,397	0/0:16,0:16:26.84:0,27,258	0/0:20,0:20:35.94:0,36,346	0/0:16,0:16:20.99:0,21,202	0/0:26,0:26:35.92:0,36,342	0/0:27,0:24:33.01:0,33,312	1/1:9,19:28:52.76:564,53,0	0/0:27,0:27:54:0,54,520	0/0:18,0:18:32.97:0,33,306	0/0:14,0:14:39:0,39,362	0/0:19,0:18:42.06:0,42,401	0/0:13,0:13:20.97:0,21,192	0/0:13,0:13:24.03:0,24,231	0/0:20,0:18:33.02:0,33,307	0/0:22,0:21:35.97:0,36,337	0/0:8,0:7:15.02:0,15,145	0/0:28,1:25:44.98:0,45,420	0/0:25,0:23:41.93:0,42,395	0/0:23,0:19:42.03:0,42,403
chr10	4772178	.	T	TC	10399.51	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-13.792;DP=659;FS=1.325;HRun=1;HaplotypeScore=64.6156;InbreedingCoeff=0.9997;MQ=80.47;MQ0=0;MQRankSum=-2.293;QD=38.80;ReadPosRankSum=1.781;VQSLOD=5.5498;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,34:36:81.27:1207,81,0	0/0:9,0:9:24.07:0,24,299	0/0:20,0:19:39.51:0,40,528	0/0:28,0:28:57.95:0,58,768	0/0:28,0:28:72.23:0,72,934	0/0:22,0:22:54.13:0,54,682	0/0:21,0:21:60.20:0,60,779	1/1:0,33:33:99:1423,99,0	0/0:23,0:23:66.21:0,66,856	0/0:22,0:22:60.15:0,60,749	0/0:14,0:14:36.11:0,36,454	0/0:25,0:25:75.23:0,75,958	0/0:21,0:21:54.18:0,54,700	0/0:22,0:22:63.20:0,63,818	1/1:1,36:37:96.33:1438,96,0	1/1:0,28:28:75.17:1096,75,0	1/1:1,26:27:69.23:1034,69,0	1/1:0,19:19:51.17:764,51,0	0/0:20,0:20:57.17:0,57,718	0/0:20,0:20:60.20:0,60,779	0/0:35,0:35:99:0,102,1305	0/0:18,0:18:51.17:0,51,662	0/0:22,0:22:60.18:0,60,763	0/0:21,0:21:60.20:0,60,779	1/1:3,18:21:44.88:673,45,0	1/1:0,20:20:60.19:878,60,0	1/1:0,32:31:84.28:1258,84,0	1/1:0,15:15:42.14:629,42,0
chr10	4772867	.	GGA	G	1540.81	PASS	AB=0.931;AC=17;AF=0.315;AN=54;BaseQRankSum=11.785;DP=609;FS=49.474;HRun=0;HaplotypeScore=106.9656;InbreedingCoeff=0.5132;MQ=42.59;MQ0=121;MQRankSum=-5.841;QD=6.64;ReadPosRankSum=-1.806;VQSLOD=1.0838;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:15,3:17:99:109,0,101	0/0:4,0:2:6.02:0,6,84	./.	0/0:87,1:4:6.91:0,7,103	0/0:16,0:15:32.93:0,33,466	0/0:21,0:21:60.13:0,60,1011	0/0:28,0:27:48.18:0,48,1087	0/1:26,1:23:53.06:53,0,580	0/0:21,0:21:36.94:0,37,971	0/0:16,0:13:32.31:0,32,603	0/0:12,0:10:27.06:0,27,443	0/0:26,0:26:54.95:0,55,927	0/0:7,0:7:5.93:0,6,230	0/0:10,0:10:22.89:0,23,374	1/1:33,4:34:17.06:309,17,0	0/1:24,3:37:99:276,0,123	1/1:13,4:13:16.26:148,16,0	1/1:8,2:9:9.11:97,9,0	0/0:17,0:15:36.07:0,36,616	0/1:8,0:7:1.93:2,0,156	0/0:19,0:17:19.31:0,19,518	0/0:19,0:19:39.76:0,40,608	0/0:15,0:14:36.05:0,36,601	0/0:20,0:20:29.41:0,29,514	1/1:12,1:12:12.42:101,12,0	0/1:26,3:22:51.88:210,0,52	1/1:21,1:21:5.57:224,6,0	1/1:11,2:12:25.77:192,26,0
chr10	4772868	.	GA	G	1691.06	PASS	AB=0.838;AC=13;AF=0.241;AN=54;BaseQRankSum=10.451;DP=590;FS=13.816;HRun=2;HaplotypeScore=101.6392;InbreedingCoeff=0.3871;MQ=42.62;MQ0=119;MQRankSum=-6.884;QD=7.79;ReadPosRankSum=-2.068;VQSLOD=-0.5255;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:11,5:15:99:137,0,109	0/0:4,0:2:6.02:0,6,89	./.	0/0:89,0:5:7.24:0,7,88	0/0:16,0:15:33.06:0,33,404	0/0:21,0:21:60.13:0,60,841	0/0:26,1:26:60.06:0,60,897	0/1:21,6:23:99:119,0,606	0/0:20,0:20:59.94:0,60,850	0/0:16,0:13:36.12:0,36,522	0/0:13,0:11:26.71:0,27,402	0/0:24,1:25:61.72:0,62,795	0/0:7,0:7:20.96:0,21,263	0/0:8,0:8:21.54:0,22,302	1/1:28,8:33:32.30:359,32,0	0/1:28,8:35:79.18:351,0,79	0/1:15,1:13:6.08:37,0,6	0/1:10,0:9:1.50:7,0,1	0/0:16,0:14:36.12:0,36,530	0/0:6,1:6:14.47:0,14,157	0/0:16,1:16:33.24:0,33,455	0/0:17,0:17:44.99:0,45,605	0/0:14,0:13:36.11:0,36,495	0/0:16,2:18:37.62:0,38,481	1/1:11,2:12:8.62:82,9,0	0/1:22,7:22:64.17:221,0,64	0/1:13,8:20:0.27:326,0,0	1/1:7,6:12:13.89:216,14,0
chr10	4772869	.	A	AAGG	779.84	PASS	AB=0.825;AC=9;AF=0.167;AN=54;BaseQRankSum=8.367;DP=599;FS=1.061;HRun=0;HaplotypeScore=127.7627;InbreedingCoeff=-0.1774;MQ=42.78;MQ0=122;MQRankSum=-8.785;QD=4.00;ReadPosRankSum=-0.215;VQSLOD=2.1135;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:17,0:16:8.01:8,0,107	0/0:3,0:2:6.02:0,6,102	./.	0/0:92,0:5:5.88:0,6,78	0/0:15,0:14:30.05:0,30,440	0/0:21,0:21:57.13:0,57,934	0/0:26,0:25:66.70:0,67,1086	0/0:27,0:24:19.36:0,19,609	0/0:20,0:20:57.18:0,57,920	0/0:17,0:14:36.12:0,36,589	0/0:13,0:11:27.09:0,27,448	0/0:25,0:25:63.14:0,63,940	0/0:7,0:7:21.07:0,21,333	0/0:8,0:8:20.59:0,21,346	0/1:31,2:33:21.98:203,0,22	0/1:33,0:36:67.33:192,0,67	0/1:15,0:13:22.29:22,0,29	0/1:6,0:11:8.22:8,0,41	0/0:17,0:14:36.09:0,36,574	0/0:7,0:6:14.88:0,15,203	0/0:17,0:16:32.62:0,33,513	0/0:18,0:18:42.56:0,43,630	0/0:13,0:12:33.07:0,33,494	0/0:18,0:18:39.10:0,39,575	0/1:5,7:12:9.67:14,0,10	0/1:17,11:24:49.92:337,0,50	0/1:18,1:20:28.02:102,0,28	0/1:10,1:11:19.10:29,0,19
chr10	4773324	.	TG	T	2372.93	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=8.095;DP=634;FS=2.304;HRun=2;HaplotypeScore=44.4231;InbreedingCoeff=0.9737;MQ=57.56;MQ0=145;MQRankSum=-1.372;QD=31.22;ReadPosRankSum=0.653;VQSLOD=3.1794;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:25:68.92:0,69,978	0/0:10,0:8:24.08:0,24,360	0/0:26,0:4:9.03:0,9,131	0/0:32,0:13:27.09:0,27,362	0/0:19,0:14:36.12:0,36,538	0/0:18,0:10:24.08:0,24,360	0/0:36,0:18:51.12:0,51,718	0/0:30,0:13:33.11:0,33,494	0/0:30,0:24:69.22:0,69,1008	0/0:19,0:15:42.14:0,42,612	0/0:17,0:14:39.13:0,39,585	0/0:19,0:11:33.11:0,33,494	0/0:19,0:14:39.13:0,39,584	0/0:39,0:28:69.23:0,69,1033	1/1:1,16:17:42.14:545,42,0	1/1:0,11:11:27.09:350,27,0	0/0:38,0:29:87.29:0,87,1303	1/1:1,8:9:24.08:311,24,0	0/0:8,0:6:18.06:0,18,269	0/0:19,0:12:33.11:0,33,495	0/0:65,0:39:99:0,108,1595	0/0:20,0:14:42.14:0,42,628	0/0:15,0:9:27.09:0,27,401	0/0:36,0:23:66.17:0,66,941	1/1:0,7:7:18.06:234,18,0	1/1:1,18:19:54.18:700,54,0	1/1:0,8:8:24.08:312,24,0	1/1:0,5:5:9.03:117,9,0
chr10	4773402	.	TG	T	2179.49	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=9.419;DP=743;FS=2.367;HRun=2;HaplotypeScore=44.5816;InbreedingCoeff=0.9706;MQ=47.06;MQ0=154;MQRankSum=0.217;QD=33.53;ReadPosRankSum=-0.361;VQSLOD=3.1714;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:29:84.28:0,84,1258	0/0:8,0:5:15.05:0,15,225	0/0:21,0:5:15.05:0,15,223	0/0:30,0:4:12.03:0,12,161	0/0:17,0:12:36.12:0,36,540	0/0:17,0:13:39.13:0,39,585	0/0:46,0:20:60.20:0,60,899	0/0:57,0:15:45.14:0,45,655	0/0:34,0:20:57.19:0,57,852	0/0:40,0:23:69.23:0,69,1034	0/0:16,0:9:27.09:0,27,405	0/0:45,0:34:99:0,102,1525	0/0:35,0:23:56.89:0,57,782	0/0:31,0:25:63.20:0,63,924	1/1:0,17:17:48.16:623,48,0	1/1:0,7:7:21.07:273,21,0	0/0:27,0:14:36.12:0,36,539	1/1:0,4:4:9.03:117,9,0	0/0:20,0:6:18.06:0,18,268	0/0:13,0:7:17.74:0,18,269	0/0:82,0:51:99:0,141,2085	0/0:31,0:20:54.17:0,54,790	0/0:19,0:9:27.08:0,27,384	0/0:33,0:22:51.16:0,51,741	1/1:0,9:9:27.09:350,27,0	1/1:2,11:11:33.11:428,33,0	1/1:0,10:10:30.10:389,30,0	1/1:0,5:5:15.05:195,15,0
chr10	4774088	.	ACAGCCAAT	A	2009.51	PASS	AB=1.000;AC=3;AF=0.056;AN=54;BaseQRankSum=8.260;DP=661;FS=0.000;HRun=0;HaplotypeScore=167.6639;InbreedingCoeff=0.6420;MQ=65.03;MQ0=0;MQRankSum=-6.503;QD=54.31;ReadPosRankSum=2.086;VQSLOD=3.3209;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,141,6192	./.	0/1:10,0:8:28.78:29,0,194	0/0:10,0:10:16.64:0,17,229	0/0:27,0:27:67.11:0,67,3026	0/0:16,0:16:45.13:0,45,1856	0/0:38,0:38:99:0,114,4959	0/0:37,0:37:99:0,105,4327	0/0:24,0:24:72.22:0,72,2963	0/0:23,0:23:66.21:0,66,2921	0/0:25,0:25:72.23:0,72,3122	0/0:23,0:23:69.24:0,69,3110	0/0:25,0:25:75.26:0,75,3420	0/0:19,0:19:57.18:0,57,2514	0/0:25,0:25:75.24:0,75,3304	1/1:0,27:27:69.24:2086,69,0	0/0:41,0:41:99:0,123,5687	0/0:10,0:10:30.10:0,30,1314	0/0:20,0:19:57.15:0,57,2246	0/0:22,0:22:66.23:0,66,2955	0/0:27,0:27:81.28:0,81,3659	0/0:31,0:31:93.32:0,93,3962	0/0:22,0:21:60.21:0,60,2673	0/0:30,0:30:87.30:0,87,3875	0/0:17,0:17:51.16:0,51,2081	0/0:22,0:22:66.21:0,66,2831	0/0:25,0:25:75.24:0,75,3291	0/0:18,0:18:54.15:0,54,2271
chr10	4775589	.	GCACACACA	G	1570.53	PASS	AB=0.700;AC=9;AF=0.180;AN=50;BaseQRankSum=5.121;DP=441;FS=11.109;HRun=0;HaplotypeScore=110.2137;InbreedingCoeff=0.6633;MQ=61.88;MQ0=8;MQRankSum=-6.687;QD=21.22;ReadPosRankSum=-1.136;VQSLOD=1.8249;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:5.33:0,5,59	0/0:3,0:3:6.02:0,6,239	./.	./.	0/0:13,0:14:12.04:0,12,421	0/0:18,0:18:24.08:0,24,848	0/0:23,0:23:33.09:0,33,1177	0/0:16,0:15:15.05:0,15,395	0/0:10,0:11:24:0,24,684	0/0:10,0:10:15.05:0,15,505	0/0:8,0:9:9.03:0,9,231	0/0:25,0:26:30.10:0,30,1135	0/0:9,0:9:9.03:0,9,361	0/0:11,0:13:24.07:0,24,572	1/1:10,4:15:15.05:356,15,0	0/0:19,0:24:9.03:0,9,313	0/0:17,0:23:16.10:0,16,469	1/1:13,4:17:12.03:300,12,0	0/0:6,0:7:6:0,6,143	0/0:10,0:10:21.07:0,21,760	0/0:33,0:38:36.12:0,36,1280	0/0:4,0:7:9.03:0,9,311	0/0:5,0:5:6.02:0,6,220	0/0:22,0:23:42.11:0,42,1267	1/1:5,4:9:6.02:150,6,0	0/1:12,7:21:17.43:481,0,17	1/1:6,5:12:18.06:431,18,0	./.
chr10	4776152	.	AGT	A	349.03	PASS	AB=0.966;AC=20;AF=0.417;AN=48;BaseQRankSum=5.690;DP=655;FS=0.723;HRun=0;HaplotypeScore=93.9654;InbreedingCoeff=-0.1612;MQ=68.12;MQ0=22;MQRankSum=-1.079;QD=0.89;ReadPosRankSum=0.592;VQSLOD=1.7552;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:48,0:48:3.21:15,3,0	1/1:5,0:5:3.01:32,3,0	./.	./.	0/1:16,0:16:4.14:4,0,126	0/0:22,0:21:24.06:0,24,331	0/1:26,0:27:57.63:58,0,195	0/0:27,0:27:14.78:0,15,99	0/1:15,1:15:17.36:17,0,161	0/0:22,0:22:15.04:0,15,197	0/0:8,0:8:3.01:0,3,45	0/1:20,2:22:46.60:47,0,139	0/0:15,0:15:11.98:0,12,154	0/0:19,0:19:2.86:0,3,293	0/1:23,0:23:14.74:76,0,15	0/0:11,0:11:0.09:0,0,17	0/1:33,0:33:1.21:1,0,299	0/1:27,0:25:24.67:25,0,35	./.	0/1:20,0:19:32.37:32,0,116	0/1:44,4:48:34.57:35,0,295	0/1:19,3:23:28.41:28,0,156	0/0:11,0:10:2.99:0,3,24	0/1:32,0:32:7.08:7,0,434	./.	1/1:22,0:22:3.38:19,3,0	0/1:10,0:10:4.77:5,0,34	1/1:18,1:19:14.55:89,15,0
chr10	4776186	.	TGTGTGTGTGTGTGCGCGTGC	T	546.02	PASS	AB=1.000;AC=7;AF=0.130;AN=54;BaseQRankSum=3.641;DP=590;FS=14.496;HRun=0;HaplotypeScore=205.4601;InbreedingCoeff=0.0664;MQ=50.23;MQ0=29;MQRankSum=-0.292;QD=3.50;ReadPosRankSum=-1.327;VQSLOD=1.7551;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:5,50:55:2.90:171,3,0	0/0:10,0:9:15.05:0,15,562	./.	0/0:19,0:4:8.98:0,9,81	0/0:10,0:9:18.06:0,18,940	0/0:21,0:19:42.13:0,42,2447	0/0:34,0:33:75.23:0,75,3195	0/1:20,0:17:99:110,0,631	0/0:14,0:13:36.58:0,37,1799	0/0:19,0:19:56.17:0,56,2113	0/0:10,0:10:19.29:0,19,859	0/0:20,0:20:39.13:0,39,1972	0/0:16,0:15:37.48:0,37,2246	0/0:22,0:22:51.16:0,51,2205	0/0:25,0:23:33.06:0,33,684	0/1:14,0:14:99:101,0,608	0/1:34,0:34:12.82:13,0,1586	0/0:29,0:27:33.02:0,33,558	0/0:14,0:12:22.58:0,23,665	0/0:13,0:12:24.08:0,24,1567	0/0:59,0:58:99:0,117,4873	0/0:22,0:22:39.11:0,39,1857	0/0:8,0:8:18.06:0,18,796	0/0:27,0:26:72.23:0,72,4096	0/0:14,0:13:6.02:0,6,118	0/1:25,0:24:99:231,0,652	0/1:8,0:8:45.45:45,0,374	0/0:15,0:15:15.88:0,16,231
chr10	4776194	.	TGTGTGCGCGTGC	T	1885.43	PASS	AB=0.943;AC=11;AF=0.212;AN=52;BaseQRankSum=7.408;DP=549;FS=4.515;HRun=0;HaplotypeScore=135.2933;InbreedingCoeff=0.1865;MQ=53.79;MQ0=17;MQRankSum=-1.116;QD=8.73;ReadPosRankSum=0.595;VQSLOD=2.4706;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:52,0:52:2.90:96,3,0	0/0:11,0:10:18.05:0,18,427	./.	0/0:8,0:3:3.01:0,3,36	0/0:12,0:11:5.10:0,5,596	0/0:18,0:16:39.12:0,39,1388	0/0:33,0:32:57.26:0,57,1864	0/1:22,0:19:90.64:365,0,91	0/0:15,0:14:35.70:0,36,1197	0/0:16,0:16:44.59:0,45,988	0/0:9,0:9:15.51:0,16,447	0/0:20,0:20:39.56:0,40,1059	0/0:16,0:15:33.55:0,34,1223	0/0:20,0:20:54.01:0,54,1265	0/1:24,0:22:6.30:256,0,6	0/1:14,0:14:99:188,0,110	0/1:34,0:34:20.22:20,0,444	0/1:26,0:24:11.66:104,0,12	0/0:17,0:15:30.96:0,31,645	0/0:13,0:12:26.58:0,27,906	0/0:52,0:51:99:0,102,2682	0/0:20,0:20:38.44:0,38,1130	0/0:9,0:9:21.02:0,21,542	0/0:29,0:28:75.18:0,75,2554	./.	0/1:23,0:22:11.61:597,0,12	1/1:6,0:6:14.38:179,14,0	0/1:5,10:15:4.84:227,0,5
chr10	4776196	.	TGTGCGCGTGC	T	2394.94	PASS	AB=0.921;AC=12;AF=0.231;AN=52;BaseQRankSum=7.292;DP=538;FS=2.748;HRun=0;HaplotypeScore=115.3151;InbreedingCoeff=0.2315;MQ=54.00;MQ0=16;MQRankSum=-2.245;QD=11.57;ReadPosRankSum=1.110;VQSLOD=2.2428;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:51,0:51:2.90:82,3,0	0/0:10,0:9:18.06:0,18,437	./.	0/0:8,0:3:3.01:0,3,36	0/0:12,0:11:5.13:0,5,539	0/0:18,0:16:39.13:0,39,1368	0/0:35,0:34:80.37:0,80,1902	0/1:21,0:19:72.86:366,0,73	0/0:14,0:13:35.69:0,36,1107	0/0:15,0:15:40.01:0,40,904	0/0:9,0:9:15.05:0,15,405	0/0:20,0:20:36.08:0,36,948	0/0:16,0:15:33.10:0,33,1132	0/0:20,0:20:29.97:0,30,1234	1/1:5,17:21:5.05:465,5,0	0/1:14,0:14:43.93:229,0,44	0/1:34,0:34:36.20:36,0,294	0/1:2,20:20:35.65:194,0,36	0/0:16,0:14:30.96:0,31,627	0/0:13,0:12:26.83:0,27,800	0/0:50,0:49:99:0,99,2493	0/0:21,0:21:10.56:0,11,999	0/0:9,0:9:15.05:0,15,444	0/0:29,0:28:73.93:0,74,2333	./.	0/1:22,0:21:25.76:665,0,26	0/1:5,0:5:7.68:179,0,8	1/1:14,1:15:13.59:330,14,0
chr10	4776198	.	TGCGCGTGC	T	2299.81	PASS	AB=0.828;AC=15;AF=0.288;AN=52;BaseQRankSum=7.485;DP=522;FS=0.551;HRun=0;HaplotypeScore=98.6448;InbreedingCoeff=0.4777;MQ=54.48;MQ0=15;MQRankSum=-3.289;QD=10.65;ReadPosRankSum=0.226;VQSLOD=2.1284;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:51,0:51:2.90:68,3,0	0/0:9,0:8:17.89:0,18,391	./.	0/0:8,0:3:3.01:0,3,36	0/0:12,0:11:18.53:0,19,468	0/0:18,0:16:39.13:0,39,1158	0/0:33,0:32:78.25:0,78,1739	1/1:6,14:18:18.59:413,19,0	0/0:14,0:13:35.72:0,36,990	0/0:15,0:15:38.56:0,39,813	0/0:9,0:9:15.05:0,15,376	0/0:17,0:17:23.49:0,23,868	0/0:14,0:13:30.10:0,30,964	0/0:18,0:18:47.78:0,48,1035	0/1:22,0:21:1.42:339,0,1	1/1:13,0:14:1.86:325,2,0	0/1:13,0:34:99:135,0,120	0/1:22,0:20:40.74:129,0,41	0/0:18,0:16:35.45:0,35,718	0/1:11,0:11:0.33:0,0,626	0/0:49,0:48:78.55:0,79,2217	0/0:19,0:19:23.61:0,24,870	0/0:8,0:8:15.03:0,15,422	0/0:28,0:27:66.22:0,66,1925	./.	0/1:5,17:21:40.67:674,0,41	1/1:5,0:5:9.48:161,9,0	1/1:14,0:14:11.29:215,11,0
chr10	4776890	.	T	TTCTAAGACAGGCTCTCTC	2869.29	PASS	AB=0.696;AC=26;AF=0.929;AN=28;BaseQRankSum=-3.298;DP=50;FS=8.563;HRun=0;HaplotypeScore=29.4176;InbreedingCoeff=-0.2057;MQ=128.20;MQ0=0;MQRankSum=-2.584;QD=65.21;ReadPosRankSum=-1.617;VQSLOD=1.0948;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:4:8.99:117,9,0	./.	0/1:4,0:7:18.03:624,0,18	0/1:5,1:9:34.73:1026,0,35	./.	1/1:2,0:2:6.02:181,6,0	./.	./.	1/1:2,0:2:2.98:21,3,0	./.	1/1:2,0:2:6.02:101,6,0	./.	1/1:1,0:1:3.01:49,3,0	1/1:1,0:1:2.98:21,3,0	./.	1/1:2,0:2:5.96:43,6,0	./.	./.	1/1:2,0:2:6.02:183,6,0	./.	1/1:1,0:1:2.97:20,3,0	./.	./.	1/1:1,0:1:3.01:89,3,0	1/1:1,0:1:3.01:78,3,0	1/1:9,0:9:21:406,21,0	./.	./.
chr10	4784547	.	GCCCCCTTTTCTAGTAATGAC	G	10154.79	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=12.201;DP=555;FS=7.468;HRun=0;HaplotypeScore=296.5178;InbreedingCoeff=0.9747;MQ=87.68;MQ0=0;MQRankSum=-11.548;QD=103.62;ReadPosRankSum=4.802;VQSLOD=3.5571;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:84.29:0,84,7524	0/0:13,0:13:36.12:0,36,3247	0/0:21,0:21:63.21:0,63,3452	0/0:22,0:22:63.22:0,63,4085	0/0:19,0:19:57.18:0,57,4082	0/0:24,0:24:69.24:0,69,5773	0/0:18,0:18:48.10:0,48,3588	0/0:41,0:40:99:0,114,8229	0/0:12,0:12:36.12:0,36,3141	0/0:25,0:25:72.25:0,72,6245	0/0:28,0:28:81.28:0,81,7275	0/0:24,0:24:72.25:0,72,5763	0/0:14,0:14:36.12:0,36,3000	0/0:28,0:28:81.26:0,81,6466	1/1:5,12:17:26.90:1508,27,0	0/0:21,0:21:60.21:0,60,5595	0/0:15,0:15:42.14:0,42,3275	1/1:3,5:8:6.02:335,6,0	0/0:11,0:11:30.09:0,30,2159	0/0:20,0:20:54.17:0,54,4274	0/0:11,0:11:30.10:0,30,2645	0/0:19,0:19:54.17:0,54,4451	0/0:18,0:18:51.18:0,51,4786	0/0:17,0:17:48.16:0,48,3560	1/1:5,16:21:39.13:2179,39,0	1/1:3,22:25:66.20:3310,66,0	1/1:4,13:17:36.12:1988,36,0	1/1:3,7:10:15.05:833,15,0
chr10	4784595	.	CA	C	3011.37	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=5.248;DP=573;FS=0.826;HRun=7;HaplotypeScore=113.6739;InbreedingCoeff=0.9967;MQ=79.64;MQ0=0;MQRankSum=2.410;QD=26.19;ReadPosRankSum=0.993;VQSLOD=3.0380;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,34:37:93.21:948,93,0	0/0:13,0:13:36.59:0,37,454	0/0:17,0:17:26.07:0,26,327	0/0:14,0:14:23.72:0,24,232	0/0:18,0:18:51.16:0,51,638	0/0:17,0:17:45.14:0,45,564	0/0:16,0:16:42.13:0,42,528	1/1:3,26:29:78.16:785,78,0	0/0:19,0:19:51.12:0,51,602	0/0:23,0:23:54.17:0,54,679	0/0:17,0:17:42.12:0,42,515	0/0:21,0:21:57.17:0,57,706	0/0:14,0:14:42.12:0,42,515	0/0:29,0:29:87.27:0,87,1083	0/0:27,0:27:75.06:0,75,927	1/1:0,29:29:84.19:857,84,0	1/1:1,19:20:57.13:581,57,0	0/0:8,0:8:18.06:0,18,226	0/0:20,0:20:54.15:0,54,645	0/0:21,0:21:60.17:0,60,729	0/0:16,0:16:45.14:0,45,566	0/0:18,0:18:45.14:0,45,563	0/0:16,0:16:48.14:0,48,591	0/0:15,0:15:45.13:0,45,554	0/0:22,0:22:62.90:0,63,706	0/0:35,0:35:96.27:0,96,1188	0/0:25,0:25:69.12:0,69,834	0/0:16,0:16:42.07:0,42,508
chr10	4784937	.	TG	T	811.10	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.506;DP=566;FS=10.151;HRun=1;HaplotypeScore=63.0772;InbreedingCoeff=0.9458;MQ=95.72;MQ0=0;MQRankSum=-1.876;QD=36.87;ReadPosRankSum=-1.656;VQSLOD=2.6970;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,117,1839	0/0:4,0:4:12.04:0,12,192	0/0:31,1:32:59.74:0,60,1217	0/0:22,0:22:62.08:0,62,807	0/0:22,0:22:66.15:0,66,999	0/0:12,0:12:36.12:0,36,571	0/0:27,0:27:78.25:0,78,1223	1/1:0,22:22:66.21:906,66,0	0/0:20,0:20:60.20:0,60,953	0/0:19,0:19:54.18:0,54,863	0/0:8,0:8:21.04:0,21,292	0/0:21,0:21:63.21:0,63,1002	0/0:21,0:21:60.20:0,60,959	0/0:24,0:24:72.25:0,72,1148	0/0:31,0:31:93.32:0,93,1486	0/0:30,0:30:90.31:0,90,1434	0/0:27,0:27:81.24:0,81,1237	0/0:19,0:19:57.17:0,57,886	0/0:26,0:26:78.22:0,78,1195	0/0:11,0:11:30.10:0,30,476	0/0:27,0:27:78.23:0,78,1196	0/0:16,0:16:45.15:0,45,712	0/0:12,0:12:36.11:0,36,552	0/0:21,0:21:63.18:0,63,960	0/0:8,0:8:19.29:0,19,296	0/0:17,0:17:51.15:0,51,766	0/0:23,0:23:66.21:0,66,1031	0/0:5,0:5:15.05:0,15,239
chr10	4786112	.	G	GAGTAACAA	22575.42	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-11.437;DP=602;FS=1.090;HRun=0;HaplotypeScore=133.2739;InbreedingCoeff=0.9862;MQ=88.38;MQ0=0;MQRankSum=-16.539;QD=88.19;ReadPosRankSum=2.127;VQSLOD=5.3949;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,31:44:93.32:3734,93,0	0/0:5,0:5:15.05:0,15,422	0/0:23,0:23:59.93:0,60,1264	0/0:28,0:28:78.27:0,78,2058	0/0:11,0:11:33.11:0,33,966	0/0:14,0:14:42.13:0,42,1157	0/0:20,0:20:60.19:0,60,1541	1/1:1,13:28:68.69:3011,69,0	0/0:18,0:18:54.19:0,54,1520	0/0:20,0:20:60.15:0,60,1630	0/0:8,0:8:24.08:0,24,689	0/0:29,0:29:86.66:0,87,2377	0/0:20,0:20:54.18:0,54,1533	0/0:23,0:23:66.21:0,66,1792	1/1:2,23:32:63.22:2842,63,0	1/1:0,18:22:45.15:2012,45,0	1/1:1,18:26:45.15:1996,45,0	1/1:1,3:6:9.03:312,9,0	0/0:23,0:23:66.21:0,66,1736	0/0:16,0:16:48.15:0,48,1312	0/0:29,0:29:84.27:0,84,2381	0/0:13,0:13:36.11:0,36,931	0/0:18,0:18:51.16:0,51,1397	0/0:28,0:28:81.26:0,81,2283	1/1:1,19:24:42.14:1797,42,0	1/1:3,24:32:84.24:3136,84,0	1/1:1,30:34:69.06:3116,69,0	1/1:0,6:7:15.05:620,15,0
chr10	4789554	.	C	CA	2273.92	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.087;DP=548;FS=3.362;HRun=0;HaplotypeScore=63.0913;InbreedingCoeff=0.9642;MQ=84.80;MQ0=0;MQRankSum=-1.648;QD=39.21;ReadPosRankSum=2.347;VQSLOD=4.3231;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:93.31:0,93,1299	0/0:7,0:7:18.03:0,18,231	0/0:22,0:21:31.09:0,31,659	0/0:16,0:15:44.98:0,45,497	0/0:10,0:10:24.08:0,24,336	0/0:19,0:19:57.16:0,57,761	0/0:25,0:25:72.24:0,72,1005	0/0:30,0:30:84.27:0,84,1146	0/0:22,0:22:63.18:0,63,846	0/0:11,0:11:33.11:0,33,462	0/0:13,0:13:39.12:0,39,520	0/0:27,0:27:81.26:0,81,1115	0/0:22,0:22:66.22:0,66,922	0/0:19,0:19:57.19:0,57,797	0/0:27,0:27:78.26:0,78,1087	1/1:0,23:23:54.18:862,54,0	1/1:1,34:35:96.33:1533,96,0	0/0:19,0:19:54.18:0,54,754	0/0:25,0:25:72.23:0,72,989	0/0:8,0:8:24.08:0,24,335	0/0:37,0:37:99:0,99,1367	0/0:17,0:17:51.16:0,51,693	0/0:12,0:12:33.11:0,33,461	0/0:17,0:17:51.15:0,51,695	0/0:18,0:18:54.18:0,54,755	0/0:16,0:16:39.13:0,39,540	0/0:12,0:12:36.12:0,36,503	0/0:3,0:3:9.01:0,9,108
chr10	4790556	.	GT	G	6544.70	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=15.958;DP=668;FS=7.479;HRun=2;HaplotypeScore=88.4138;InbreedingCoeff=0.9997;MQ=79.77;MQ0=0;MQRankSum=-1.433;QD=35.38;ReadPosRankSum=2.704;VQSLOD=5.2384;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,129,1925	0/0:15,0:15:45.14:0,45,651	0/0:20,0:21:50.82:0,51,808	0/0:10,0:10:27.97:0,28,393	0/0:30,0:30:90.29:0,90,1318	0/0:18,0:18:51.15:0,51,725	0/0:27,0:27:81.26:0,81,1195	0/0:36,0:36:99:0,102,1495	0/0:25,0:25:72.24:0,72,1077	0/0:34,0:34:99:0,99,1484	0/0:23,0:23:69.22:0,69,1007	0/0:22,0:22:66.22:0,66,988	0/0:24,0:24:72.24:0,72,1079	0/0:17,0:17:48.15:0,48,702	1/1:1,22:23:60.19:778,60,0	1/1:1,22:23:60.19:779,60,0	1/1:0,29:29:87.28:1130,87,0	1/1:0,28:28:78.25:1011,78,0	0/0:17,0:17:48.16:0,48,720	0/0:21,0:21:63.21:0,63,944	0/0:35,0:35:99:0,99,1482	0/0:16,0:16:48.16:0,48,719	0/0:17,0:17:45.15:0,45,674	0/0:32,0:32:93.30:0,93,1375	1/1:0,17:17:45.15:583,45,0	1/1:1,30:31:63.46:1102,63,0	1/1:0,24:24:63.20:816,63,0	1/1:0,10:10:27.09:345,27,0
chr10	4794657	.	T	TG	7505.64	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-13.638;DP=642;FS=4.422;HRun=5;HaplotypeScore=67.4730;InbreedingCoeff=0.9999;MQ=76.29;MQ0=0;MQRankSum=-1.819;QD=31.94;ReadPosRankSum=3.598;VQSLOD=5.6122;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,28:30:78.25:1026,78,0	0/0:11,0:11:30.05:0,30,312	0/0:21,0:21:60.15:0,60,639	0/0:22,0:22:46.94:0,47,480	0/0:17,0:17:42.01:0,42,421	0/0:15,0:15:39.08:0,39,410	0/0:28,0:28:78.19:0,78,838	1/1:4,18:22:54.14:691,54,0	0/0:26,0:26:72.14:0,72,750	0/0:24,0:24:60.15:0,60,644	0/0:25,0:25:66.10:0,66,683	0/0:24,0:24:66.15:0,66,699	0/0:16,0:16:48.10:0,48,505	0/0:23,0:23:69.17:0,69,737	1/1:3,21:24:59.98:784,60,0	1/1:3,17:20:42.14:552,42,0	1/1:2,32:34:84.27:1104,84,0	1/1:3,19:22:57.18:745,57,0	0/0:17,0:17:51.11:0,51,534	0/0:18,0:18:50.67:0,51,506	0/0:42,0:42:99:0,114,1218	0/0:23,0:23:57.14:0,57,610	0/0:15,0:15:39.76:0,40,391	0/0:40,0:40:99:0,105,1106	1/1:2,15:17:45.14:575,45,0	1/1:3,13:16:39.12:499,39,0	1/1:2,26:28:72.23:939,72,0	1/1:1,21:22:45.15:590,45,0
chr10	4794662	.	G	GC	2637.87	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=15.140;DP=634;FS=8.411;HRun=3;HaplotypeScore=82.5773;InbreedingCoeff=0.9105;MQ=79.52;MQ0=0;MQRankSum=-1.079;QD=11.67;ReadPosRankSum=3.715;VQSLOD=1.3630;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:30:31.99:325,32,0	0/0:10,0:10:30.08:0,30,347	0/0:23,0:23:65.96:0,66,707	0/0:22,0:22:34.95:0,35,374	0/0:17,0:17:39.05:0,39,437	0/0:13,0:13:36.11:0,36,431	0/0:26,1:27:70.28:0,70,915	0/1:21,0:21:23.76:180,0,24	0/0:26,0:26:69.19:0,69,810	0/0:22,0:22:60.18:0,60,714	0/0:24,0:24:60.10:0,60,673	0/0:24,0:24:66.16:0,66,774	0/0:16,0:16:45.13:0,45,527	0/0:24,0:24:69.18:0,69,802	1/1:23,2:25:9.69:284,10,0	1/1:18,0:18:16.22:193,16,0	1/1:33,0:33:41.23:427,41,0	1/1:20,2:22:33.67:296,34,0	0/0:20,0:20:54.13:0,54,613	0/0:19,0:19:47.99:0,48,503	0/0:42,0:42:99:0,118,1354	0/0:20,0:20:57.13:0,57,665	0/0:16,0:16:39.09:0,39,453	0/0:43,0:43:99:0,119,1299	1/1:15,0:15:42.67:241,43,0	1/1:13,0:13:32.86:150,33,0	1/1:26,1:27:69.48:485,69,0	1/1:21,1:22:43.23:271,43,0
chr10	4795420	.	TTTC	T	3052.18	PASS	AB=0.974;AC=14;AF=0.250;AN=56;BaseQRankSum=14.390;DP=602;FS=13.535;HRun=0;HaplotypeScore=119.5099;InbreedingCoeff=0.7621;MQ=64.81;MQ0=3;MQRankSum=-9.410;QD=20.62;ReadPosRankSum=3.368;VQSLOD=3.0403;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:3,0:2:0:0,0,0	0/0:14,0:14:42.14:0,42,849	0/0:30,0:19:26.96:0,27,555	0/0:14,0:12:17.58:0,18,240	0/0:28,0:28:66.23:0,66,1275	0/0:24,0:24:54.18:0,54,1029	0/0:19,0:18:41.99:0,42,695	0/0:4,0:2:0.09:0,0,1	0/0:23,0:23:66.21:0,66,1235	0/0:30,0:29:75.26:0,75,1525	0/0:22,0:22:60.21:0,60,1210	0/0:21,0:21:57.20:0,57,1126	0/0:23,0:23:63.22:0,63,1271	0/0:22,0:22:51.16:0,51,898	1/1:19,2:21:45.10:518,45,0	0/1:21,0:21:22.31:407,0,22	1/1:19,2:19:33:399,33,0	1/1:15,1:15:24.03:288,24,0	0/0:36,0:35:57.19:0,57,1068	0/0:33,0:33:81.28:0,81,1614	0/0:25,0:23:45.15:0,45,833	0/0:26,0:26:60.10:0,60,1121	0/0:34,0:34:75.26:0,75,1404	0/0:23,0:21:57.18:0,57,1072	1/1:17,3:20:51.13:585,51,0	0/1:17,1:17:25.35:338,0,25	1/1:14,4:17:30.09:366,30,0	1/1:9,4:13:30.07:338,30,0
chr10	4795437	.	TCTTTTCTTC	T	6367.15	PASS	AB=0.714;AC=10;AF=0.179;AN=56;BaseQRankSum=14.300;DP=590;FS=12.866;HRun=0;HaplotypeScore=167.5957;InbreedingCoeff=0.2554;MQ=58.29;MQ0=20;MQRankSum=-10.534;QD=52.19;ReadPosRankSum=2.918;VQSLOD=4.1687;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:5:5.72:0,6,179	0/0:15,0:15:45.15:0,45,1886	0/0:24,0:15:30.08:0,30,613	0/0:12,0:8:11.28:0,11,254	0/0:30,0:28:84.29:0,84,3008	0/0:23,0:23:66.23:0,66,2357	0/0:22,0:19:54.31:0,54,1529	0/0:8,0:3:8.69:0,9,70	0/0:26,0:26:72.23:0,72,2647	0/0:36,0:33:99:0,99,3815	0/0:25,0:25:72.25:0,72,2807	0/0:24,0:23:69.24:0,69,2668	0/0:28,0:26:78.27:0,78,3354	0/0:24,0:24:72.23:0,72,2139	0/1:10,8:17:11.48:1130,0,11	0/1:9,6:14:99:803,0,111	0/1:9,0:15:99:263,0,197	0/1:9,2:10:50.85:437,0,51	0/0:26,0:25:69.23:0,69,2314	0/0:33,0:33:96.33:0,96,4056	0/0:22,0:20:57.20:0,57,1958	0/0:24,0:23:66.12:0,66,2380	0/0:31,0:31:93.32:0,93,3279	0/0:27,0:24:66.21:0,66,2468	0/1:13,10:22:99:1300,0,158	0/1:7,8:14:99:889,0,175	1/1:8,4:10:30.10:670,30,0	1/1:7,4:11:30.10:875,30,0
chr10	4795440	.	T	TC	179.44	PASS	AB=0.845;AC=4;AF=0.071;AN=56;BaseQRankSum=6.406;DP=606;FS=2.510;HRun=0;HaplotypeScore=105.8393;InbreedingCoeff=0.3668;MQ=55.48;MQ0=24;MQRankSum=-1.171;QD=4.72;ReadPosRankSum=-3.319;VQSLOD=2.6810;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:8,3:8:99:146,0,116	0/0:15,0:15:45.15:0,45,629	0/0:19,0:13:17.18:0,17,354	0/0:9,0:5:9.03:0,9,122	0/0:33,0:30:84.28:0,84,1171	0/0:25,0:25:69.22:0,69,945	0/0:19,0:17:23.86:0,24,606	1/1:3,5:3:9.03:128,9,0	0/0:28,0:27:66.17:0,66,884	0/0:39,0:35:99:0,105,1403	0/0:26,0:26:72.14:0,72,943	0/0:25,0:24:69.23:0,69,962	0/0:28,0:26:78.26:0,78,1089	0/0:22,0:22:66.17:0,66,880	0/0:19,0:18:11.85:0,12,84	0/0:14,0:13:13.09:0,13,83	0/1:17,2:17:11.46:11,0,164	0/0:10,0:9:7.75:0,8,30	0/0:25,0:24:69.18:0,69,935	0/0:37,0:37:99:0,102,1391	0/0:24,0:22:57.17:0,57,777	0/0:25,0:24:69.20:0,69,905	0/0:31,0:31:90.29:0,90,1238	0/0:25,0:23:63.20:0,63,863	0/0:23,0:22:36.04:0,36,156	0/0:17,0:15:23.69:0,24,177	0/0:16,0:11:12.77:0,13,41	0/0:13,0:12:16.71:0,17,51
chr10	4795451	.	TC	T	1074.17	PASS	AB=0.949;AC=8;AF=0.143;AN=56;BaseQRankSum=12.328;DP=670;FS=12.517;HRun=1;HaplotypeScore=96.5456;InbreedingCoeff=0.0654;MQ=45.78;MQ0=92;MQRankSum=-9.441;QD=6.63;ReadPosRankSum=1.725;VQSLOD=-0.5155;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:8:24.06:0,24,338	0/0:16,0:15:45.15:0,45,714	0/0:4,0:2:6.02:0,6,83	0/0:5,0:2:6.02:0,6,78	0/0:34,0:28:72.24:0,72,1143	0/0:22,0:22:57.19:0,57,905	0/0:20,0:17:50.04:0,50,694	0/0:12,0:2:6.02:0,6,91	0/0:26,0:25:57.19:0,57,899	0/0:49,0:37:99:0,111,1715	0/0:32,0:29:72.24:0,72,1126	0/0:24,0:23:60.05:0,60,953	0/0:32,0:29:84.27:0,84,1298	0/0:19,0:18:51.14:0,51,761	0/1:22,3:23:99:244,0,175	0/1:12,2:13:99:118,0,142	0/0:21,0:16:43.49:0,43,437	0/1:14,0:12:31:31,0,270	0/0:24,0:21:60.19:0,60,896	0/0:38,0:38:99:0,105,1644	0/0:29,0:20:51.17:0,51,803	0/0:24,0:22:57.06:0,57,880	0/0:32,0:31:84.17:0,84,1268	0/0:31,0:22:60.20:0,60,945	0/1:24,2:23:99:309,0,212	0/1:36,0:16:99:121,0,225	0/1:24,0:13:36.54:130,0,37	1/1:21,2:17:8.54:257,9,0
chr10	4795458	.	CTT	C	764.07	PASS	AB=0.977;AC=10;AF=0.185;AN=54;BaseQRankSum=12.459;DP=712;FS=7.761;HRun=4;HaplotypeScore=107.5061;InbreedingCoeff=-0.0315;MQ=42.94;MQ0=129;MQRankSum=-10.469;QD=3.34;ReadPosRankSum=1.432;VQSLOD=-0.6515;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:14,1:9:99:169,0,131	0/0:17,0:15:33.44:0,33,683	0/0:2,0:1:3.01:0,3,30	./.	0/0:37,0:29:74.70:0,75,1311	0/0:22,0:22:51.17:0,51,925	0/0:21,0:17:27.73:0,28,620	1/1:13,0:2:5.85:60,6,0	0/0:27,0:26:48:0,48,884	0/0:52,0:37:99:0,104,1713	0/0:34,0:31:78.19:0,78,1199	0/0:24,0:23:63.21:0,63,1095	0/0:30,0:26:78.25:0,78,1372	0/0:19,0:17:45.06:0,45,739	0/1:27,0:22:99:117,0,210	0/1:16,0:14:96.93:97,0,169	0/1:22,0:16:17.57:18,0,214	0/0:16,0:13:0.45:0,0,290	0/0:20,0:18:48.15:0,48,825	0/0:38,0:38:99:0,108,1879	0/0:31,0:18:48.10:0,48,799	0/0:27,0:23:60.20:0,60,1065	0/0:32,0:30:66.74:0,67,1287	0/0:30,0:20:45.08:0,45,771	0/1:26,0:23:99:135,0,311	0/1:48,0:17:99:113,0,205	0/1:32,1:18:75.49:75,0,137	0/1:26,3:21:8.06:123,0,8
chr10	4795460	.	T	TC	968.75	PASS	AB=0.956;AC=11;AF=0.204;AN=54;BaseQRankSum=12.716;DP=728;FS=12.432;HRun=0;HaplotypeScore=100.4479;InbreedingCoeff=-0.0783;MQ=42.09;MQ0=140;MQRankSum=-10.803;QD=3.81;ReadPosRankSum=1.199;VQSLOD=2.5696;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:17,4:13:94.02:269,0,94	0/0:17,0:15:43.36:0,43,569	0/0:2,0:1:3:0,3,28	./.	0/0:38,0:30:76.50:0,76,1045	0/0:24,0:23:51.17:0,51,712	0/0:23,0:18:46.78:0,47,613	1/1:11,1:2:6.02:72,6,0	0/0:27,0:26:48.16:0,48,671	0/0:51,0:36:93.90:0,94,1345	0/0:36,0:33:78.18:0,78,1014	0/0:26,0:23:63.04:0,63,867	0/0:31,0:27:78.25:0,78,1073	0/0:20,0:17:45.05:0,45,571	0/1:28,0:21:99:129,0,232	0/1:17,1:15:96.75:97,0,155	0/1:18,3:14:38.60:39,0,135	0/1:16,0:13:24.98:25,0,292	0/0:19,0:17:51.14:0,51,677	0/0:39,0:39:99:0,108,1480	0/0:31,0:18:48.09:0,48,615	0/0:28,0:24:62.02:0,62,843	0/0:31,0:29:75.72:0,76,1044	0/0:29,0:18:45.07:0,45,586	0/1:26,1:23:99:148,0,325	0/1:48,1:18:99:117,0,206	0/1:35,0:20:72.84:73,0,154	0/1:27,0:19:31.69:148,0,32
chr10	4795474	.	T	TC	2298.36	PASS	AB=0.971;AC=14;AF=0.259;AN=54;BaseQRankSum=11.237;DP=811;FS=0.000;HRun=0;HaplotypeScore=100.1370;InbreedingCoeff=-0.1527;MQ=37.82;MQ0=205;MQRankSum=-10.884;QD=6.03;ReadPosRankSum=-3.708;VQSLOD=2.5939;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:25,6:19:77.52:453,0,78	0/1:13,0:11:10.60:11,0,328	0/0:1,0:1:2.97:0,3,20	./.	0/0:41,0:29:24.43:0,24,738	0/0:28,0:25:57.03:0,57,730	0/1:23,1:17:2.55:3,0,500	1/1:20,0:9:20.90:268,21,0	0/0:31,0:30:57.93:0,58,729	0/0:49,0:30:90.29:0,90,1225	0/0:31,0:27:66.11:0,66,863	0/0:30,0:23:59.05:0,59,778	0/0:32,0:26:78.26:0,78,1080	0/0:23,0:17:45.11:0,45,601	0/1:33,0:23:99:234,0,322	0/1:21,0:17:99:145,0,356	0/1:26,2:12:99:182,0,135	0/1:26,0:16:53.61:54,0,267	0/0:24,0:20:55.79:0,56,766	0/0:42,0:39:99:0,111,1496	0/0:32,0:17:41.97:0,42,557	0/1:37,0:26:17.63:18,0,649	0/0:32,0:28:25.77:0,26,868	0/0:32,0:16:39.13:0,39,543	0/1:24,0:20:99:159,0,452	0/1:52,0:18:99:325,0,300	0/1:39,0:22:99:270,0,279	0/1:30,3:24:85.29:333,0,85
chr10	4795563	.	T	TC	1330.82	PASS	AB=0.976;AC=10;AF=0.179;AN=56;BaseQRankSum=8.464;DP=527;FS=3.076;HRun=1;HaplotypeScore=72.9983;InbreedingCoeff=0.6676;MQ=57.58;MQ0=52;MQRankSum=-1.275;QD=11.78;ReadPosRankSum=1.883;VQSLOD=2.3012;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:16:2.88:0,3,47	0/0:8,0:8:21.01:0,21,272	0/0:47,0:16:19.63:0,20,270	0/0:35,0:21:32.94:0,33,349	0/0:25,0:22:52.41:0,52,659	0/0:20,0:19:41.21:0,41,623	0/0:17,0:16:43.02:0,43,538	0/0:11,0:9:24.45:0,24,149	0/0:7,0:7:18.02:0,18,214	0/0:18,0:16:48.16:0,48,621	0/0:19,0:19:57.17:0,57,724	0/0:20,0:16:45.12:0,45,555	0/0:17,0:15:45.13:0,45,569	0/0:20,0:18:45.15:0,45,582	1/1:19,0:16:31.38:257,31,0	0/0:19,0:18:32.50:0,32,218	0/0:22,0:11:15.01:0,15,142	1/1:14,0:9:4.47:110,4,0	0/0:6,0:4:12.04:0,12,155	0/0:24,0:20:57.18:0,57,734	0/0:6,0:5:12.04:0,12,155	0/0:17,0:13:27.97:0,28,348	0/0:14,0:14:33.05:0,33,413	0/0:21,0:18:44.97:0,45,544	1/1:23,2:23:58.86:494,59,0	0/1:19,1:15:21.32:241,0,21	1/1:15,1:13:28.34:260,28,0	0/1:19,0:17:58.43:132,0,58
chr10	4795565	.	TC	T	4057.78	PASS	AB=0.621;AC=19;AF=0.339;AN=56;BaseQRankSum=9.966;DP=499;FS=0.423;HRun=1;HaplotypeScore=63.6240;InbreedingCoeff=0.9009;MQ=59.77;MQ0=28;MQRankSum=-2.635;QD=25.05;ReadPosRankSum=1.709;VQSLOD=3.5901;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,16:16:34.88:442,35,0	0/0:7,0:7:21.07:0,21,328	0/0:48,0:17:38.36:0,38,439	0/0:38,0:24:46.80:0,47,573	0/0:23,0:21:57.09:0,57,831	0/0:18,0:18:46.37:0,46,719	0/0:18,0:17:42.06:0,42,625	1/1:1,9:9:27.09:372,27,0	0/0:7,0:7:15.52:0,16,233	0/0:17,0:16:48.16:0,48,750	0/0:19,0:19:57.19:0,57,890	0/0:19,0:18:48.16:0,48,730	0/0:18,0:17:45.15:0,45,703	0/0:18,0:17:51.17:0,51,794	1/1:1,17:17:39.05:491,39,0	1/1:1,14:14:30.10:418,30,0	1/1:8,10:11:27.04:354,27,0	1/1:3,6:7:17.97:226,18,0	0/0:7,0:4:12.04:0,12,188	0/0:25,0:22:63.18:0,63,925	0/0:6,0:5:12.04:0,12,187	0/0:16,0:13:29.98:0,30,438	0/0:12,0:12:33:0,33,485	0/0:21,0:19:44.81:0,45,668	1/1:4,21:24:38.38:693,38,0	0/1:7,11:14:24.36:389,0,24	1/1:1,15:14:32.32:416,32,0	1/1:2,10:12:11.04:256,11,0
chr10	4796438	.	ACTTTTGGAGCCTT	A	10768.22	PASS	AB=0.550;AC=11;AF=0.196;AN=56;BaseQRankSum=14.958;DP=737;FS=6.521;HRun=0;HaplotypeScore=270.2127;InbreedingCoeff=0.8786;MQ=79.00;MQ0=0;MQRankSum=-13.697;QD=77.47;ReadPosRankSum=2.303;VQSLOD=3.7483;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,150,8761	0/0:4,0:4:12.04:0,12,782	0/0:29,0:29:69.23:0,69,3603	0/0:12,0:12:27.08:0,27,1144	0/0:22,0:22:63.21:0,63,4060	0/0:33,0:33:93.32:0,93,5915	0/0:21,0:21:60.21:0,60,3719	0/0:34,0:34:99:0,99,5126	0/0:28,0:28:81.25:0,81,4586	0/0:25,0:25:75.26:0,75,4294	0/0:16,0:16:45.15:0,45,2837	0/0:34,0:34:96.33:0,96,5911	0/0:20,0:20:60.21:0,60,3826	0/0:27,0:27:69.23:0,69,4258	1/1:4,27:31:69.24:2715,69,0	0/0:23,0:23:66.21:0,66,4097	0/0:34,0:34:99:0,102,6352	1/1:8,11:19:21.07:764,21,0	0/0:22,0:22:60.20:0,60,3346	0/0:29,0:29:87.30:0,87,5299	0/0:40,0:40:99:0,111,6976	0/0:25,0:25:72.23:0,72,4037	0/0:25,0:25:72.25:0,72,4529	0/0:40,0:40:99:0,117,7388	1/1:2,21:23:48.16:1800,48,0	0/1:6,27:33:99:2774,0,114	1/1:2,19:22:47.95:1889,48,0	1/1:4,7:11:21.07:826,21,0
chr10	4797780	.	T	TTC	7051.31	PASS	AB=0.514;AC=15;AF=0.268;AN=56;BaseQRankSum=1.083;DP=730;FS=6.918;HRun=0;HaplotypeScore=93.5014;InbreedingCoeff=0.9243;MQ=64.96;MQ0=18;MQRankSum=2.690;QD=33.10;ReadPosRankSum=5.781;VQSLOD=6.8316;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,104,1360	0/0:10,0:10:30.09:0,30,386	0/0:43,0:17:24.62:0,25,258	0/0:41,0:21:24.20:0,24,241	0/0:27,0:27:75.25:0,75,999	0/0:20,0:20:51.06:0,51,609	0/0:21,0:21:54.14:0,54,686	0/0:32,0:29:75.21:0,75,978	0/0:20,0:20:35.86:0,36,636	0/0:38,0:38:96.30:0,96,1261	0/0:23,0:23:66.22:0,66,879	0/0:22,0:22:60.14:0,60,763	0/0:25,0:25:63.21:0,63,838	0/0:21,0:21:60.18:0,60,772	1/1:4,24:29:45.15:778,45,0	0/1:1,17:18:6.84:486,0,7	1/1:5,28:34:51.87:1076,52,0	1/1:3,22:25:51.17:883,51,0	0/0:28,0:25:66.21:0,66,865	0/0:26,0:26:75.22:0,75,957	0/0:19,0:19:54.16:0,54,703	0/0:19,0:19:54.17:0,54,706	0/0:22,0:22:54.18:0,54,719	0/0:21,0:21:62.01:0,62,803	1/1:5,31:36:63.22:1091,63,0	1/1:1,31:32:56.30:1441,56,0	1/1:2,17:20:33.11:569,33,0	1/1:0,17:17:42.14:727,42,0
chr10	4800127	.	AACC	A	8061.19	PASS	AB=0.540;AC=15;AF=0.268;AN=56;BaseQRankSum=16.449;DP=685;FS=0.000;HRun=0;HaplotypeScore=107.4708;InbreedingCoeff=0.9080;MQ=85.49;MQ0=0;MQRankSum=-3.339;QD=39.91;ReadPosRankSum=5.006;VQSLOD=5.3581;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,117,2565	0/0:10,0:10:27.09:0,27,567	0/0:24,0:24:57.18:0,57,1145	0/0:21,0:21:40.51:0,41,951	0/0:30,0:30:84.29:0,84,1856	0/0:25,0:25:72.25:0,72,1586	0/0:28,0:28:84.29:0,84,1862	0/0:25,0:25:72.24:0,72,1567	0/0:20,0:20:60.21:0,60,1340	0/0:22,0:22:66.23:0,66,1475	0/0:22,0:22:57.20:0,57,1263	0/0:34,0:34:87.30:0,87,1917	0/0:24,0:24:72.25:0,72,1590	0/0:26,0:26:75.26:0,75,1660	1/1:2,26:28:69.24:1127,69,0	1/1:1,25:26:60.20:980,60,0	1/1:1,24:25:51.17:833,51,0	1/1:6,27:33:81.28:1322,81,0	0/0:18,0:18:48.16:0,48,1071	0/0:7,0:7:21.07:0,21,469	0/0:41,0:41:99:0,117,2543	0/0:18,0:18:51.18:0,51,1122	0/0:16,0:16:45.15:0,45,997	0/0:31,0:30:93.28:0,93,1985	1/1:2,19:21:57.19:931,57,0	0/1:4,23:27:99:1036,0,123	1/1:2,28:30:81.23:1293,81,0	1/1:1,11:12:33.11:539,33,0
chr10	4801142	.	AT	A	20386.32	PASS	AB=0.754;AC=54;AF=0.964;AN=56;BaseQRankSum=-1.718;DP=670;FS=9.397;HRun=3;HaplotypeScore=226.6346;InbreedingCoeff=-0.0388;MQ=69.11;MQ0=0;MQRankSum=-6.695;QD=30.43;ReadPosRankSum=3.150;VQSLOD=2.4769;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,41:42:99:1260,108,0	1/1:0,5:5:15.05:186,15,0	0/1:9,9:18:39.17:254,0,39	0/1:13,3:16:97.12:115,0,97	1/1:0,16:16:48.11:577,48,0	1/1:1,17:17:51.15:619,51,0	1/1:2,24:26:68.93:776,69,0	1/1:3,25:28:75.19:897,75,0	1/1:1,28:29:84.26:1039,84,0	1/1:2,32:34:93.29:1149,93,0	1/1:5,16:21:45.08:525,45,0	1/1:0,33:33:96.27:1172,96,0	1/1:1,18:19:54.17:669,54,0	1/1:0,24:24:72.18:873,72,0	1/1:3,38:41:99:1263,105,0	1/1:2,22:24:63.20:778,63,0	1/1:2,25:27:60.10:721,60,0	1/1:2,14:16:39.12:483,39,0	1/1:4,17:21:51.16:630,51,0	1/1:1,25:26:66.10:780,66,0	1/1:5,17:21:42.11:506,42,0	1/1:2,29:31:87.02:1034,87,0	1/1:2,15:17:45.14:556,45,0	1/1:2,24:26:57:685,57,0	1/1:4,25:29:66.16:798,66,0	1/1:1,20:21:60.19:741,60,0	1/1:1,33:34:93.29:1151,93,0	1/1:2,4:6:12.04:148,12,0
chr10	4802645	.	C	CCTTTTTCCTTT	17284.24	PASS	AB=1.000;AC=18;AF=0.321;AN=56;BaseQRankSum=9.368;DP=801;FS=1.033;HRun=0;HaplotypeScore=269.4730;InbreedingCoeff=0.8573;MQ=55.85;MQ0=6;MQRankSum=-11.516;QD=49.24;ReadPosRankSum=0.176;VQSLOD=4.2483;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:36,0:36:89.46:89,0,925	0/0:11,0:11:20.99:0,21,509	0/0:57,0:27:18.73:0,19,191	0/1:60,0:19:3.65:4,0,101	0/0:33,0:33:81.14:0,81,2090	0/0:24,0:24:66.18:0,66,1666	0/0:24,0:22:48.05:0,48,1069	0/0:34,0:29:63.14:0,63,1277	0/0:23,0:23:62.97:0,63,1661	0/0:23,0:23:48.16:0,48,1452	0/0:27,0:27:60.06:0,60,1619	0/0:19,0:19:48.13:0,48,1350	0/0:25,0:25:52.37:0,52,1295	0/0:17,0:17:42.14:0,42,1172	1/1:38,0:38:94.87:3024,95,0	1/1:26,0:26:63.13:1301,63,0	1/1:32,1:32:63.14:1699,63,0	1/1:16,0:16:32.81:415,33,0	0/0:24,0:24:57.16:0,57,1454	0/0:38,0:38:75.19:0,75,2019	0/0:13,0:13:33.11:0,33,863	0/0:24,0:24:60.19:0,60,1731	0/0:13,0:13:21.04:0,21,508	0/0:21,0:21:51.14:0,51,1331	1/1:35,6:40:95.06:3589,95,0	1/1:39,0:39:87.02:2773,87,0	1/1:39,0:39:88.41:3224,88,0	1/1:22,0:22:39.12:1167,39,0
chr10	4802673	.	T	TC	436.83	PASS	AB=0.649;AC=1;AF=0.018;AN=56;BaseQRankSum=4.655;DP=739;FS=7.650;HRun=1;HaplotypeScore=170.0880;InbreedingCoeff=-0.0230;MQ=50.04;MQ0=10;MQRankSum=-3.865;QD=18.20;ReadPosRankSum=-0.591;VQSLOD=3.0469;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:36:52.59:0,53,534	0/0:14,0:14:42.14:0,42,545	0/0:28,0:6:6.02:0,6,78	0/0:42,0:12:19.10:0,19,243	0/0:31,0:31:93.29:0,93,1194	0/0:20,0:20:60.16:0,60,737	0/0:26,0:24:66.21:0,66,855	0/0:47,0:44:99:0,113,1302	0/0:23,0:23:63.19:0,63,803	0/0:28,0:28:84.25:0,84,1063	0/0:24,0:24:72.19:0,72,915	0/0:19,0:19:57.14:0,57,720	0/0:22,0:22:60.17:0,60,761	0/0:27,0:27:78.18:0,78,941	0/0:36,0:36:84.63:0,85,629	0/1:11,13:24:99:511,0,156	0/0:28,0:26:42.31:0,42,422	0/0:15,0:15:19.98:0,20,169	0/0:25,0:23:66.14:0,66,811	0/0:24,0:24:72.23:0,72,927	0/0:14,0:14:39.10:0,39,478	0/0:25,0:25:75.24:0,75,961	0/0:6,0:6:18.06:0,18,234	0/0:22,0:22:66.21:0,66,855	0/0:38,0:38:96.38:0,96,835	0/0:37,0:35:74.63:0,75,594	0/0:46,0:45:96.54:0,97,699	0/0:10,0:10:16.56:0,17,97
chr10	4802676	.	T	TTTC	5025.53	PASS	AB=0.851;AC=7;AF=0.125;AN=56;BaseQRankSum=10.537;DP=730;FS=5.532;HRun=0;HaplotypeScore=181.1302;InbreedingCoeff=-0.1481;MQ=49.14;MQ0=10;MQRankSum=-10.941;QD=24.40;ReadPosRankSum=2.692;VQSLOD=4.6969;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:34:44.56:0,45,596	0/0:15,0:15:45.13:0,45,763	0/0:24,0:6:6.02:0,6,106	0/0:39,0:11:4.29:0,4,234	0/0:32,0:32:93.32:0,93,1627	0/0:19,0:19:57.19:0,57,975	0/0:26,0:24:69.22:0,69,1188	0/0:46,0:42:99:0,107,1688	0/0:23,0:23:63.19:0,63,1076	0/0:29,0:29:87.29:0,87,1504	0/0:24,0:24:72.24:0,72,1200	0/0:21,0:21:60.17:0,60,1007	0/0:22,0:22:63.20:0,63,1052	0/0:26,0:26:69.24:0,69,1200	0/1:30,4:34:99:878,0,238	0/0:24,0:24:25.40:0,25,496	0/1:26,1:25:99:452,0,313	0/1:14,0:14:85:87,0,85	0/0:25,0:23:63.18:0,63,1012	0/0:24,0:24:72.25:0,72,1269	0/0:14,0:14:39.07:0,39,625	0/0:27,0:27:75.23:0,75,1247	0/0:7,0:7:21.03:0,21,337	0/0:22,0:22:66.23:0,66,1159	0/1:31,7:38:99:845,0,291	0/1:26,11:35:99:992,0,459	0/1:32,12:45:99:1333,0,323	0/1:6,4:10:16.54:439,0,17
chr10	4802677	.	TC	T	1301.01	PASS	AB=0.855;AC=7;AF=0.125;AN=56;BaseQRankSum=9.047;DP=716;FS=6.635;HRun=1;HaplotypeScore=157.3510;InbreedingCoeff=-0.1471;MQ=49.24;MQ0=10;MQRankSum=-7.248;QD=6.71;ReadPosRankSum=-1.013;VQSLOD=0.0096;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:35:51.01:0,51,671	0/0:15,0:15:45.08:0,45,658	0/0:24,0:6:6.02:0,6,90	0/0:37,0:10:13.92:0,14,199	0/0:32,0:32:96.29:0,96,1405	0/0:19,0:19:57.18:0,57,835	0/0:26,0:24:68.82:0,69,1012	0/0:47,0:43:99:0,111,1590	0/0:23,0:23:66.16:0,66,946	0/0:29,0:29:87.29:0,87,1317	0/0:25,0:25:72.61:0,73,1026	0/0:21,0:21:60.12:0,60,859	0/0:22,0:22:63.17:0,63,888	0/0:27,0:27:78.18:0,78,1118	0/1:24,9:33:99:375,0,676	0/0:24,0:24:49.18:0,49,752	0/1:20,7:25:99:225,0,519	0/1:12,2:14:44.66:45,0,131	0/0:23,0:21:63.20:0,63,903	0/0:24,0:24:72.24:0,72,1091	0/0:13,0:13:39.12:0,39,562	0/0:26,0:26:78.21:0,78,1086	0/0:7,0:7:21:0,21,293	0/0:22,0:22:66.22:0,66,992	0/1:35,2:37:99:127,0,1090	0/1:32,3:33:99:203,0,711	0/1:37,3:39:99:299,0,624	0/1:5,3:8:22.62:158,0,23
chr10	4802694	.	CT	C	581.22	PASS	AB=0.885;AC=12;AF=0.214;AN=56;BaseQRankSum=5.005;DP=698;FS=8.916;HRun=13;HaplotypeScore=150.2050;InbreedingCoeff=0.2502;MQ=49.74;MQ0=8;MQRankSum=0.197;QD=2.25;ReadPosRankSum=-1.221;VQSLOD=0.1859;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:36:23.49:0,23,112	0/0:11,0:15:26.70:0,27,224	1/1:9,0:2:0.89:2,1,0	0/0:14,0:6:2.74:0,3,12	0/0:29,2:32:25.06:0,25,521	0/0:17,0:17:30.04:0,30,287	0/0:25,1:24:32.08:0,32,442	0/1:45,0:41:20.74:21,0,31	0/0:21,2:23:25.95:0,26,376	0/0:31,1:33:23:0,23,371	0/0:25,0:25:38.51:0,39,497	0/0:21,1:22:22.66:0,23,318	0/0:15,2:17:20.19:0,20,342	0/0:32,0:32:68.68:0,69,606	0/1:27,8:35:99:146,0,109	0/0:19,0:20:13.46:0,13,70	0/0:26,0:26:13:0,13,81	0/1:17,1:19:17.09:17,0,28	0/0:22,0:21:41.71:0,42,363	0/1:24,2:26:1.74:2,0,304	0/0:15,1:17:10.97:0,11,250	0/0:21,0:21:54:0,54,501	0/0:9,1:10:1.96:0,2,162	0/0:26,0:26:50.99:0,51,472	0/1:34,7:40:99:102,0,180	0/1:26,8:32:13.72:106,0,14	1/1:25,16:41:24.68:267,25,0	1/1:4,3:7:8.47:65,8,0
chr10	4802695	.	T	TTTCTTTC	10552.14	PASS	AB=1.000;AC=22;AF=0.393;AN=56;BaseQRankSum=15.207;DP=699;FS=5.337;HRun=0;HaplotypeScore=199.1233;InbreedingCoeff=0.9187;MQ=50.02;MQ0=7;MQRankSum=-13.784;QD=31.41;ReadPosRankSum=0.799;VQSLOD=4.0621;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:38,0:37:24.73:568,25,0	0/0:15,0:15:42.07:0,42,770	0/1:9,0:2:0.03:0,0,0	0/1:13,0:6:1.42:1,0,4	0/0:32,0:32:96.25:0,96,1689	0/0:18,0:18:48.13:0,48,881	0/0:25,0:23:63.16:0,63,1151	1/1:45,0:42:77.19:769,77,0	0/0:23,0:23:60.02:0,60,1090	0/0:32,0:32:76.89:0,77,1314	0/0:25,0:25:72.08:0,72,1350	0/0:22,0:22:35:0,35,892	0/0:17,0:17:45.14:0,45,909	0/0:32,0:32:81.04:0,81,1409	1/1:25,8:33:84.03:1732,84,0	1/1:22,0:21:52.71:785,53,0	1/1:27,0:24:48.93:845,49,0	1/1:6,13:20:8.08:204,8,0	0/0:22,0:21:57:0,57,771	0/0:26,0:26:63.16:0,63,1184	0/0:17,0:17:42.57:0,43,676	0/0:21,0:21:63.16:0,63,1227	0/0:10,0:10:8.09:0,8,470	0/0:26,0:26:66.15:0,66,1281	1/1:31,12:42:94.65:2341,95,0	1/1:31,0:32:90.18:1516,90,0	1/1:42,0:42:83.13:1530,83,0	1/1:9,0:9:20.96:263,21,0
chr10	4802696	.	T	TTC	3913.50	PASS	AB=0.993;AC=18;AF=0.321;AN=56;BaseQRankSum=17.619;DP=686;FS=2.753;HRun=0;HaplotypeScore=151.8166;InbreedingCoeff=0.6940;MQ=50.19;MQ0=7;MQRankSum=-16.328;QD=12.23;ReadPosRankSum=1.202;VQSLOD=3.7696;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:38,0:37:4.07:175,4,0	0/0:15,0:15:41.82:0,42,451	0/0:8,0:2:2.49:0,2,21	0/1:10,0:5:1.08:1,0,11	0/0:32,0:32:95.90:0,96,1062	0/0:18,0:18:48.10:0,48,585	0/0:25,0:23:63.10:0,63,770	1/1:42,0:41:90.37:482,90,0	0/0:23,0:23:60.06:0,60,705	0/0:29,0:29:77.19:0,77,908	0/0:25,0:25:70.27:0,70,868	0/0:22,0:22:65.32:0,65,638	0/0:16,0:16:45.12:0,45,582	0/0:31,0:31:87:0,87,1015	0/1:32,0:33:2.67:362,0,3	1/1:12,8:19:53.77:617,54,0	1/1:19,5:26:43.70:532,44,0	0/1:19,0:19:1.02:44,0,1	0/0:21,0:20:56.92:0,57,642	0/0:26,0:26:69:0,69,798	0/0:17,0:17:42.39:0,42,495	0/0:22,0:22:63.09:0,63,816	0/0:10,0:10:29.52:0,30,330	0/0:26,0:26:70.32:0,70,837	1/1:41,0:42:32.11:639,32,0	1/1:33,1:32:42.28:528,42,0	1/1:43,0:42:2.38:462,2,0	0/1:9,0:9:35.68:69,0,36
chr10	4802697	.	T	TC	2358.55	PASS	AB=0.987;AC=15;AF=0.268;AN=56;BaseQRankSum=15.209;DP=678;FS=1.469;HRun=0;HaplotypeScore=136.7755;InbreedingCoeff=0.3694;MQ=50.59;MQ0=9;MQRankSum=-15.318;QD=7.51;ReadPosRankSum=2.135;VQSLOD=3.6246;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,1:39:5.66:128,6,0	0/0:15,0:15:38.98:0,39,418	0/0:9,0:2:0.03:0,0,10	0/1:9,1:5:0.91:1,0,11	0/0:32,0:32:92.64:0,93,1004	0/0:18,0:18:51.10:0,51,588	0/0:24,0:22:63.09:0,63,728	1/1:11,25:35:74.65:743,75,0	0/0:23,0:23:62.73:0,63,679	0/0:28,0:28:76.99:0,77,869	0/0:26,0:26:70.55:0,71,817	0/0:22,0:22:65.87:0,66,642	0/0:16,0:16:45.10:0,45,548	0/0:30,0:30:87.04:0,87,978	0/1:32,0:32:99:186,0,138	1/1:20,0:19:49.20:307,49,0	1/1:28,0:25:21.37:181,21,0	0/1:19,0:19:0.81:1,0,28	0/0:21,0:20:56.59:0,57,622	0/0:25,0:25:72.01:0,72,780	0/0:17,0:17:45.41:0,45,493	0/0:22,0:22:63.09:0,63,773	0/0:10,0:10:29.99:0,30,325	0/0:26,0:26:73.29:0,73,817	0/1:42,0:41:76.58:337,0,77	0/1:35,0:33:39.30:326,0,39	0/1:43,0:42:99:264,0,109	0/1:9,0:9:53.20:53,0,65
chr10	4803218	.	C	CAT	2717.77	PASS	AB=0.635;AC=19;AF=0.339;AN=56;BaseQRankSum=13.526;DP=704;FS=1.292;HRun=0;HaplotypeScore=96.8818;InbreedingCoeff=0.7958;MQ=64.88;MQ0=13;MQRankSum=-1.178;QD=11.14;ReadPosRankSum=-0.801;VQSLOD=3.1180;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:24:22.23:303,22,0	0/0:5,0:5:8.99:0,9,74	0/0:31,0:15:35.32:0,35,413	0/0:27,0:19:48.95:0,49,536	0/0:15,0:15:37.20:0,37,336	0/0:15,0:15:41.93:0,42,357	0/0:39,0:39:89.30:0,89,766	1/1:27,0:27:74.33:573,74,0	0/0:23,0:22:59.27:0,59,467	0/0:35,0:34:88.65:0,89,803	0/0:16,0:16:30.48:0,30,269	0/0:29,0:29:68.73:0,69,542	0/0:32,0:32:77.79:0,78,611	0/0:27,0:27:68.79:0,69,544	1/1:4,26:29:0.73:207,1,0	0/1:17,22:40:99:116,0,128	1/1:28,0:27:58.48:455,58,0	1/1:3,15:17:12.25:276,12,0	0/0:18,0:17:35.91:0,36,301	0/0:15,0:15:35.95:0,36,314	0/0:64,0:64:99:0,131,1081	0/0:17,0:17:37.99:0,38,314	0/0:10,0:10:17.96:0,18,145	0/0:42,0:42:99:0,105,938	1/1:13,0:13:2.95:227,3,0	1/1:27,0:26:61.12:575,61,0	1/1:1,21:22:8.57:126,9,0	1/1:4,11:13:2.33:54,2,0
chr10	4803561	.	T	TC	1590.59	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-0.600;DP=457;FS=4.264;HRun=7;HaplotypeScore=52.9649;InbreedingCoeff=0.9848;MQ=79.49;MQ0=0;MQRankSum=-1.598;QD=23.05;ReadPosRankSum=-0.483;VQSLOD=3.2328;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:84.11:0,84,806	0/0:9,0:9:27.03:0,27,255	0/0:16,0:16:22.04:0,22,297	0/0:15,0:14:35.81:0,36,335	0/0:15,0:15:42.07:0,42,406	0/0:13,0:13:33.05:0,33,319	0/0:26,0:26:69.04:0,69,651	0/0:18,0:18:45.07:0,45,434	0/0:22,0:22:60.06:0,60,570	0/0:19,0:19:42.06:0,42,405	0/0:10,0:10:24.03:0,24,226	0/0:22,0:22:60.07:0,60,568	0/0:22,0:22:59.67:0,60,578	0/0:20,0:20:51.07:0,51,492	1/1:3,10:13:24.07:290,24,0	1/1:0,9:9:21.06:254,21,0	1/1:3,6:9:15.05:181,15,0	1/1:1,6:7:18.06:217,18,0	0/0:15,0:15:33.05:0,33,317	0/0:8,0:8:18.02:0,18,167	0/0:54,0:54:99:0,115,1265	0/0:11,0:11:27.04:0,27,261	0/0:9,0:9:24.04:0,24,231	0/0:30,0:30:78.11:0,78,749	1/1:2,6:8:15.01:166,15,0	1/1:0,10:10:24.07:289,24,0	1/1:0,7:7:18.06:217,18,0	1/1:1,5:6:15.05:181,15,0
chr10	4805306	.	T	TAATA	7380.89	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-2.595;DP=465;FS=6.614;HRun=0;HaplotypeScore=79.4235;InbreedingCoeff=0.9493;MQ=54.38;MQ0=5;MQRankSum=-5.380;QD=39.26;ReadPosRankSum=-0.491;VQSLOD=4.0880;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,9:18:23.95:504,24,0	0/0:11,0:11:33.09:0,33,562	0/0:7,0:5:15.05:0,15,251	0/0:4,0:2:2.74:0,3,12	0/0:30,0:30:75.26:0,75,1341	0/0:20,0:20:45.15:0,45,809	0/0:13,0:12:20.66:0,21,377	1/1:13,12:24:54.15:1295,54,0	0/0:11,0:11:33.11:0,33,587	0/0:27,0:27:66.22:0,66,1145	0/0:20,0:20:51.06:0,51,874	0/0:23,0:23:60.21:0,60,1069	0/0:8,0:8:12.01:0,12,184	0/0:13,0:13:33.11:0,33,593	1/1:3,7:12:14.68:351,15,0	1/1:8,8:18:21.07:507,21,0	1/1:3,12:15:27.09:701,27,0	1/1:3,9:11:12.02:257,12,0	0/0:23,0:21:45.15:0,45,788	0/0:20,0:20:54.19:0,54,967	0/0:7,0:7:15.05:0,15,269	0/0:5,0:5:12.04:0,12,198	0/0:19,0:19:57.19:0,57,988	0/0:16,0:16:30.09:0,30,500	1/1:6,16:21:44.99:1067,45,0	1/1:4,17:20:45.15:1111,45,0	1/1:5,13:21:48.16:1199,48,0	1/1:2,9:10:15.05:390,15,0
chr10	4805317	.	TA	T	633.64	PASS	AB=0.856;AC=8;AF=0.143;AN=56;BaseQRankSum=6.580;DP=447;FS=18.640;HRun=11;HaplotypeScore=68.1797;InbreedingCoeff=0.4303;MQ=62.54;MQ0=2;MQRankSum=-6.395;QD=6.81;ReadPosRankSum=-2.225;VQSLOD=0.0996;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:3,18:15:29.68:233,30,0	0/0:12,0:12:23.73:0,24,235	0/1:11,1:9:9.64:10,0,112	0/0:7,0:5:11.99:0,12,110	0/0:30,0:30:75.11:0,75,772	0/0:20,0:21:41.99:0,42,424	0/0:12,0:12:27.07:0,27,287	1/1:3,20:23:58.94:470,59,0	0/0:12,0:12:33.08:0,33,352	0/0:26,0:26:51.12:0,51,537	0/0:17,0:18:44.95:0,45,462	0/0:18,2:20:20.47:0,20,423	0/0:7,0:7:21.03:0,21,215	0/0:15,0:15:39.06:0,39,399	0/1:11,1:12:6.62:7,0,142	0/0:14,0:14:27.07:0,27,288	0/0:15,0:14:30.08:0,30,320	0/0:12,1:11:17.96:0,18,166	0/1:15,3:18:24.22:24,0,351	0/0:19,1:20:26.48:0,26,480	0/1:3,2:5:34.24:34,0,81	0/0:7,0:8:20.87:0,21,198	0/0:20,0:20:57.11:0,57,591	0/0:11,0:11:22.30:0,22,227	0/0:17,0:16:41.94:0,42,428	0/0:18,0:16:33.08:0,33,346	0/0:22,0:22:51.12:0,51,536	0/0:15,0:13:28.31:0,28,291
chr10	4806480	.	T	TACTC	21204.04	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-18.945;DP=814;FS=0.878;HRun=0;HaplotypeScore=117.3638;InbreedingCoeff=0.9982;MQ=82.10;MQ0=0;MQRankSum=-5.462;QD=65.24;ReadPosRankSum=3.078;VQSLOD=7.2107;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,40:49:99:2790,102,0	0/0:6,0:6:18.06:0,18,349	0/0:27,0:27:63.17:0,63,1098	0/0:24,0:24:54.13:0,54,933	0/0:28,0:28:72.22:0,72,1320	0/0:30,0:30:90.31:0,90,1723	0/0:24,0:24:69.21:0,69,1282	1/1:4,34:40:99:2921,117,0	0/0:23,0:23:69.24:0,69,1312	0/0:27,0:27:81.27:0,81,1476	0/0:23,0:23:66.23:0,66,1266	0/0:36,0:36:96.30:0,96,1775	0/0:32,0:32:93.32:0,93,1803	0/0:29,0:29:87.28:0,87,1639	1/1:0,33:33:87.30:2377,87,0	1/1:2,32:35:78.27:2133,78,0	1/1:3,32:35:75.11:2027,75,0	1/1:0,14:15:36.12:986,36,0	0/0:29,0:29:87.26:0,87,1593	0/0:25,0:25:72.25:0,72,1385	0/0:44,0:44:99:0,126,2372	0/0:26,0:26:75.24:0,75,1421	0/0:27,0:27:78.27:0,78,1503	0/0:29,0:29:84.29:0,84,1616	1/1:3,20:23:51.18:1394,51,0	1/1:4,35:41:99:3148,120,0	1/1:6,32:40:99:2852,105,0	1/1:1,13:14:21.07:575,21,0
chr10	4806881	.	TTAAC	T	5481.42	PASS	AB=0.514;AC=11;AF=0.196;AN=56;BaseQRankSum=14.668;DP=626;FS=0.000;HRun=0;HaplotypeScore=109.8227;InbreedingCoeff=0.8819;MQ=80.46;MQ0=0;MQRankSum=-5.883;QD=47.25;ReadPosRankSum=1.711;VQSLOD=5.2315;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,129,3349	0/0:5,0:5:15.05:0,15,411	0/0:19,0:19:54.19:0,54,1355	0/0:15,0:15:32.93:0,33,768	0/0:20,0:20:60.21:0,60,1583	0/0:19,0:19:57.20:0,57,1498	0/0:26,0:26:72.23:0,72,1874	0/0:34,0:34:99:0,99,2519	0/0:22,0:22:63.22:0,63,1691	0/0:22,0:22:57.20:0,57,1479	0/0:16,0:16:45.15:0,45,1233	0/0:22,0:22:66.22:0,66,1736	0/0:17,0:17:45.15:0,45,1211	0/0:28,0:28:84.29:0,84,2223	1/1:2,25:27:63.22:1221,63,0	0/0:28,0:28:84.29:0,84,2298	0/0:22,0:22:66.15:0,66,1674	1/1:0,17:17:41.74:814,42,0	0/0:22,0:22:63.22:0,63,1652	0/0:24,0:24:69.22:0,69,1758	0/0:34,0:34:99:0,102,2740	0/0:20,0:20:60.21:0,60,1598	0/0:17,0:17:45.15:0,45,1223	0/0:31,0:31:90.22:0,90,2314	1/1:3,22:25:57.15:1066,57,0	0/1:1,17:18:28.04:928,0,28	1/1:2,20:22:57.20:1104,57,0	1/1:0,7:7:18.06:349,18,0
chr10	4806982	.	CT	C	5256.67	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=17.106;DP=683;FS=11.682;HRun=3;HaplotypeScore=95.8644;InbreedingCoeff=0.9927;MQ=66.62;MQ0=1;MQRankSum=-6.264;QD=24.80;ReadPosRankSum=5.357;VQSLOD=3.3345;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:37:12.81:97,13,0	0/0:11,0:11:33.11:0,33,475	0/0:16,0:16:44.69:0,45,591	0/0:8,0:8:18.06:0,18,259	0/0:33,0:33:93.28:0,93,1301	0/0:25,0:25:75.25:0,75,1079	0/0:20,0:20:60.20:0,60,863	0/0:31,0:31:84.27:0,84,1169	0/0:13,0:13:39.12:0,39,544	0/0:26,0:26:78.26:0,78,1123	0/0:20,0:20:57.19:0,57,820	0/0:23,0:23:69.19:0,69,969	0/0:28,0:28:84.24:0,84,1155	0/0:30,0:30:84.27:0,84,1185	1/1:0,35:35:96.30:1193,96,0	1/1:2,0:28:26.52:99,27,0	0/0:20,0:20:39.13:0,39,561	1/1:0,26:26:78.25:967,78,0	0/0:17,0:17:51.16:0,51,717	0/0:32,0:32:90.29:0,90,1278	0/0:28,0:28:78.25:0,78,1104	0/0:28,0:28:81.27:0,81,1164	0/0:28,0:28:84.28:0,84,1195	0/0:34,0:34:99:0,102,1469	1/1:0,27:27:75.24:929,75,0	1/1:1,21:22:60.19:741,60,0	1/1:0,29:29:81.26:1007,81,0	1/1:0,6:6:18.06:223,18,0
chr10	4807031	.	AAAAAAC	A	3040.36	PASS	AB=1.000;AC=16;AF=0.286;AN=56;BaseQRankSum=15.398;DP=624;FS=0.000;HRun=0;HaplotypeScore=190.3762;InbreedingCoeff=0.8228;MQ=64.42;MQ0=3;MQRankSum=-14.670;QD=16.80;ReadPosRankSum=3.710;VQSLOD=2.3815;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:28:49.35:49,0,357	0/0:12,0:12:36.12:0,36,1202	0/0:21,0:14:31.86:0,32,747	0/0:30,0:21:46.90:0,47,1114	0/0:29,0:29:75.19:0,75,2044	0/0:17,0:17:45.15:0,45,1239	0/0:11,0:11:30.07:0,30,766	0/0:29,0:28:55.68:0,56,833	0/0:15,0:15:42.14:0,42,1402	0/0:31,0:31:78.26:0,78,2378	0/0:24,0:24:69.24:0,69,2297	0/0:23,0:23:63.19:0,63,1978	0/0:21,0:21:63.22:0,63,2020	0/0:31,0:31:87.28:0,87,2632	1/1:27,0:27:63.74:476,64,0	0/1:23,0:23:99:266,0,104	1/1:22,5:27:41.91:735,42,0	1/1:11,0:11:22.98:166,23,0	0/0:24,0:24:45.13:0,45,1316	0/0:27,0:27:72.22:0,72,2193	0/0:19,0:19:39.12:0,39,1152	0/0:25,0:25:72.20:0,72,2118	0/0:24,0:24:66.22:0,66,2079	0/0:30,0:30:83.47:0,83,2385	1/1:24,0:24:60.35:585,60,0	1/1:16,0:16:41.71:403,42,0	1/1:16,0:15:33.20:352,33,0	1/1:8,0:8:17.99:210,18,0
chr10	4807032	.	AAAAAC	A	4841.56	PASS	AB=1.000;AC=16;AF=0.286;AN=56;BaseQRankSum=15.166;DP=610;FS=0.369;HRun=0;HaplotypeScore=168.3907;InbreedingCoeff=0.8174;MQ=64.46;MQ0=3;MQRankSum=-14.405;QD=28.15;ReadPosRankSum=3.254;VQSLOD=4.6405;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:28:27.18:27,0,348	0/0:12,0:12:36.12:0,36,1043	0/0:22,0:14:33.08:0,33,712	0/0:31,0:21:46.44:0,46,1016	0/0:28,0:28:75.18:0,75,1800	0/0:17,0:17:45.14:0,45,1131	0/0:12,0:12:33.07:0,33,748	0/0:29,0:28:10.97:0,11,743	0/0:14,0:14:42.14:0,42,1216	0/0:28,0:28:78.26:0,78,2092	0/0:24,0:24:69.23:0,69,1993	0/0:23,0:23:63.19:0,63,1726	0/0:22,0:22:66.23:0,66,1835	0/0:31,0:31:87.28:0,87,2330	1/1:15,10:25:66.06:1034,66,0	0/1:22,0:22:99:188,0,106	1/1:25,0:25:42.09:699,42,0	1/1:7,3:10:27.06:402,27,0	0/0:23,0:23:48.13:0,48,1211	0/0:27,0:27:72.21:0,72,1899	0/0:17,0:17:39.11:0,39,1006	0/0:25,0:25:72.20:0,72,1864	0/0:23,0:23:66.22:0,66,1829	0/0:30,0:30:79.44:0,79,2129	1/1:17,6:23:63.59:953,64,0	1/1:8,8:16:48.13:701,48,0	1/1:8,6:13:33.11:533,33,0	1/1:5,3:8:18.06:304,18,0
chr10	4807033	.	AAAACAAAAAAAAC	A	5237.40	PASS	AB=1.000;AC=16;AF=0.286;AN=56;BaseQRankSum=14.486;DP=608;FS=0.000;HRun=0;HaplotypeScore=262.5135;InbreedingCoeff=0.8230;MQ=63.59;MQ0=3;MQRankSum=-13.831;QD=30.99;ReadPosRankSum=4.021;VQSLOD=3.6664;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:27:29.30:29,0,586	0/0:12,0:12:36.12:0,36,2255	0/0:23,0:14:36.54:0,37,1315	0/0:30,0:21:54.06:0,54,1882	0/0:28,0:28:75.19:0,75,3574	0/0:17,0:17:45.15:0,45,2082	0/0:12,0:12:33.08:0,33,1440	0/0:29,0:28:51.55:0,52,1411	0/0:15,0:15:45.15:0,45,2701	0/0:28,0:28:78.26:0,78,4224	0/0:23,0:23:69.24:0,69,4301	0/0:23,0:23:63.19:0,63,3645	0/0:22,0:22:66.23:0,66,3846	0/0:32,0:32:90.29:0,90,4782	1/1:23,0:25:57.18:580,57,0	0/1:22,0:22:99:900,0,115	1/1:7,18:25:39.22:1178,39,0	1/1:9,0:9:23.50:257,24,0	0/0:21,0:21:48.15:0,48,2462	0/0:27,0:27:75.24:0,75,4167	0/0:17,0:17:39.13:0,39,2021	0/0:24,0:24:72.20:0,72,3816	0/0:24,0:24:69.23:0,69,3893	0/0:30,0:30:83.33:0,83,4079	1/1:22,0:23:53.50:934,53,0	1/1:16,0:16:34.21:515,34,0	1/1:14,0:13:35.28:538,35,0	1/1:7,0:7:17.98:306,18,0
chr10	4807034	.	AAACAAAAAAAAC	A	7510.98	PASS	AB=1.000;AC=16;AF=0.286;AN=56;BaseQRankSum=13.522;DP=597;FS=0.378;HRun=0;HaplotypeScore=237.3713;InbreedingCoeff=0.8233;MQ=61.94;MQ0=4;MQRankSum=-13.689;QD=44.98;ReadPosRankSum=3.924;VQSLOD=4.0542;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:27:29.01:29,0,483	0/0:12,0:12:36.12:0,36,2103	0/0:23,0:13:36.57:0,37,1214	0/0:31,0:20:53.85:0,54,1747	0/0:29,0:29:78.19:0,78,3470	0/0:17,0:17:45.14:0,45,1948	0/0:11,0:11:33.08:0,33,1361	0/0:29,0:28:32.91:0,33,1294	0/0:15,0:15:45.15:0,45,2526	0/0:27,0:27:78.26:0,78,3959	0/0:23,0:23:69.24:0,69,4017	0/0:22,0:22:66.20:0,66,3537	0/0:22,0:22:66.23:0,66,3571	0/0:31,0:31:93.31:0,93,4588	1/1:21,4:25:65.71:1263,66,0	0/1:21,0:21:99:820,0,106	1/1:25,0:25:38.15:813,38,0	1/1:8,1:9:27.06:541,27,0	0/0:20,0:20:51.15:0,51,2398	0/0:26,0:26:75.22:0,75,3882	0/0:15,0:15:39.12:0,39,1872	0/0:24,0:24:72.20:0,72,3552	0/0:23,0:23:69.24:0,69,3650	0/0:30,0:30:83.43:0,83,3831	1/1:12,11:23:65.85:1631,66,0	1/1:12,4:16:48.11:977,48,0	1/1:7,6:13:36.12:934,36,0	1/1:3,4:7:18.06:503,18,0
chr10	4807037	.	CA	C	776.08	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=16.289;DP=599;FS=0.385;HRun=8;HaplotypeScore=134.4428;InbreedingCoeff=0.9580;MQ=62.41;MQ0=4;MQRankSum=-15.159;QD=4.73;ReadPosRankSum=3.686;VQSLOD=0.1525;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:17,10:26:28.85:172,29,0	0/0:12,0:12:36.11:0,36,435	0/0:26,0:16:25.71:0,26,371	0/0:29,2:20:36.28:0,36,380	0/0:25,0:25:63.18:0,63,745	0/0:16,0:16:39.10:0,39,458	0/0:12,0:12:30.09:0,30,362	0/0:25,0:28:30.20:0,30,221	0/0:15,0:15:45.14:0,45,540	0/0:28,0:28:81.24:0,81,970	0/0:24,0:24:69.21:0,69,831	0/0:24,0:24:69.21:0,69,833	0/0:23,0:23:69.19:0,69,817	0/0:33,0:33:96.29:0,96,1157	1/1:22,0:22:37.38:114,37,0	1/1:6,14:20:44.40:283,44,0	1/1:26,0:26:30.92:95,31,0	1/1:11,0:11:1.95:38,2,0	0/0:17,0:17:45.14:0,45,536	0/0:24,0:24:66.20:0,66,796	0/0:12,0:14:35.98:0,36,413	0/0:25,0:25:66.19:0,66,787	0/0:26,0:26:71.80:0,72,831	0/0:29,0:29:74.89:0,75,870	1/1:22,0:22:38.55:125,39,0	1/1:16,0:16:14.67:53,15,0	1/1:13,0:12:22.62:70,23,0	1/1:7,0:7:11.28:33,11,0
chr10	4807038	.	AAAAAAAAC	A	4710.56	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=15.875;DP=597;FS=0.375;HRun=0;HaplotypeScore=199.0049;InbreedingCoeff=0.9939;MQ=61.39;MQ0=4;MQRankSum=-14.618;QD=28.90;ReadPosRankSum=3.405;VQSLOD=4.2260;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:20,6:25:28.98:945,29,0	0/0:13,0:13:39.13:0,39,1479	0/0:27,0:15:34.80:0,35,786	0/0:34,0:21:45.05:0,45,1034	0/0:24,0:24:63.20:0,63,2278	0/0:16,0:16:39.13:0,39,1203	0/0:12,0:12:33.11:0,33,1053	0/0:28,0:27:22.20:0,22,641	0/0:15,0:15:45.15:0,45,1659	0/0:29,0:29:84.27:0,84,2895	0/0:24,0:24:72.25:0,72,2701	0/0:23,0:23:69.24:0,69,2567	0/0:23,0:23:69.23:0,69,2439	0/0:32,0:32:96.32:0,96,3230	1/1:20,0:22:43.45:324,43,0	1/1:18,2:20:48.16:1203,48,0	1/1:24,0:26:43.83:605,44,0	1/1:11,0:12:17.74:188,18,0	0/0:17,0:17:45.15:0,45,1603	0/0:24,0:24:66.23:0,66,2580	0/0:14,0:14:36.12:0,36,1172	0/0:24,0:24:66.23:0,66,2334	0/0:26,0:26:72.25:0,72,2639	0/0:29,0:29:69.74:0,70,2393	1/1:21,0:22:56.19:620,56,0	1/1:14,0:15:18.46:287,18,0	1/1:13,0:12:31.31:349,31,0	1/1:7,0:7:14.58:190,15,0
chr10	4807046	.	C	CA	1795.42	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=13.805;DP=629;FS=1.260;HRun=8;HaplotypeScore=135.1447;InbreedingCoeff=0.8618;MQ=56.59;MQ0=5;MQRankSum=-14.140;QD=9.35;ReadPosRankSum=-0.145;VQSLOD=1.3196;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:29,1:29:16.62:128,17,0	0/0:13,0:13:39.09:0,39,398	0/0:29,0:15:4.72:0,5,181	0/0:36,0:19:2.92:0,3,222	0/0:24,0:24:66.15:0,66,672	0/0:14,0:14:33.05:0,33,329	0/0:13,0:13:36.08:0,36,366	0/1:31,0:28:15.11:96,0,15	0/0:17,0:17:51.10:0,51,513	0/0:30,0:30:81.18:0,81,825	0/0:24,0:24:72.16:0,72,733	0/0:24,0:24:69.16:0,69,704	0/0:24,0:24:66.13:0,66,665	0/0:34,0:34:90.20:0,90,917	1/1:14,9:23:43.40:329,43,0	0/0:21,0:21:18.22:0,18,82	1/1:20,6:26:40.60:298,41,0	1/1:8,6:14:27.72:257,28,0	0/0:17,0:17:45.10:0,45,458	0/0:27,0:27:78.17:0,78,794	0/0:15,0:15:32.97:0,33,322	0/0:24,0:24:69.15:0,69,703	0/0:25,0:25:75.17:0,75,764	0/0:25,0:25:41.10:0,41,583	1/1:17,6:23:52.97:363,53,0	1/1:13,7:20:37.66:276,38,0	1/1:13,5:17:27.14:177,27,0	1/1:6,1:7:11.73:77,12,0
chr10	4807050	.	AAACAAAAAAACAACC	A	5765.72	PASS	AB=1.000;AC=18;AF=0.321;AN=56;BaseQRankSum=16.291;DP=658;FS=0.000;HRun=0;HaplotypeScore=298.1808;InbreedingCoeff=0.8230;MQ=55.44;MQ0=8;MQRankSum=-13.757;QD=25.86;ReadPosRankSum=-1.288;VQSLOD=2.8174;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:27,4:30:11.05:685,11,0	0/0:13,0:13:39.13:0,39,2269	0/0:35,0:15:26.85:0,27,983	0/0:35,0:17:47.52:0,48,1251	0/0:24,0:24:69.24:0,69,3630	0/0:14,0:14:42.12:0,42,1993	0/0:13,0:13:39.13:0,39,1987	0/1:34,0:31:99:198,0,599	0/0:20,0:20:60.21:0,60,2767	0/0:30,0:30:87.30:0,87,4628	0/0:24,0:24:72.25:0,72,3583	0/0:26,0:26:78.27:0,78,4194	0/0:23,0:23:66.22:0,66,3461	0/0:35,0:35:99:0,102,5411	1/1:22,0:22:16.30:277,16,0	1/1:7,14:21:62.14:1883,62,0	1/1:32,0:32:50.84:849,51,0	0/1:13,0:13:59.38:118,0,59	0/0:26,0:26:63.20:0,63,2475	0/0:28,0:28:84.29:0,84,4439	0/0:13,0:13:33.11:0,33,1395	0/0:24,0:24:69.23:0,69,3598	0/0:26,0:26:78.26:0,78,4134	0/0:26,0:26:66.81:0,67,3649	1/1:21,0:21:37.12:635,37,0	1/1:23,0:23:33.36:478,33,0	1/1:18,0:17:20.86:407,21,0	1/1:8,0:8:13.27:234,13,0
chr10	4807902	.	G	GCCTC	15494.11	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-11.075;DP=583;FS=1.450;HRun=0;HaplotypeScore=87.4065;InbreedingCoeff=0.9999;MQ=78.73;MQ0=1;MQRankSum=-5.334;QD=71.40;ReadPosRankSum=3.475;VQSLOD=6.5984;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,29:33:81.28:2216,81,0	0/0:13,0:13:39.13:0,39,777	0/0:14,0:14:39.13:0,39,760	0/0:16,0:16:45.11:0,45,801	0/0:24,0:24:72.25:0,72,1434	0/0:24,0:24:72.23:0,72,1368	0/0:25,0:25:75.24:0,75,1431	0/0:26,0:26:78.25:0,78,1456	0/0:26,0:26:78.27:0,78,1544	0/0:17,0:17:51.17:0,51,988	0/0:12,0:12:36.12:0,36,708	0/0:26,0:26:72.25:0,72,1426	0/0:18,0:18:54.19:0,54,1079	0/0:17,0:17:45.14:0,45,841	1/1:4,26:31:87.30:2338,87,0	1/1:2,22:24:72.25:1945,72,0	1/1:4,22:26:60.21:1679,60,0	1/1:0,22:23:57.20:1555,57,0	0/0:13,0:13:39.13:0,39,770	0/0:21,0:21:63.22:0,63,1258	0/0:16,0:16:48.15:0,48,922	0/0:19,0:19:57.19:0,57,1093	0/0:15,0:15:39.13:0,39,767	0/0:24,0:24:66.23:0,66,1318	1/1:2,14:15:36.12:968,36,0	1/1:3,26:30:87.29:2329,87,0	1/1:4,13:17:45.15:1219,45,0	1/1:1,15:17:45.15:1244,45,0
chr10	4809009	.	C	CTT	15499.69	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-16.517;DP=771;FS=4.471;HRun=1;HaplotypeScore=87.6249;InbreedingCoeff=0.9985;MQ=84.76;MQ0=0;MQRankSum=-2.245;QD=50.99;ReadPosRankSum=2.813;VQSLOD=4.9181;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,51:57:99:2608,135,0	0/0:7,0:7:18.06:0,18,274	0/0:19,0:19:51.17:0,51,781	0/0:31,0:31:84.28:0,84,1275	0/0:25,0:25:66.21:0,66,988	0/0:21,0:21:63.18:0,63,922	0/0:36,0:36:99:0,108,1609	1/1:4,25:29:87.28:1598,87,0	0/0:31,0:31:93.32:0,93,1419	0/0:28,0:28:81.27:0,81,1221	0/0:12,0:12:36.12:0,36,551	0/0:40,0:40:99:0,114,1741	0/0:34,0:34:99:0,99,1512	0/0:22,0:22:66.22:0,66,1008	1/1:1,38:39:99:1991,105,0	1/1:0,28:28:72.25:1392,72,0	1/1:5,33:38:99:2025,108,0	1/1:0,32:32:87.30:1681,87,0	0/0:34,0:34:99:0,102,1516	0/0:10,0:10:27.09:0,27,413	0/0:54,0:54:99:0,163,2453	0/0:19,0:19:57.19:0,57,872	0/0:16,0:16:45.11:0,45,644	0/0:28,0:28:81.24:0,81,1197	1/1:0,18:18:51.17:985,51,0	1/1:2,24:26:29.28:1310,29,0	1/1:2,18:19:57.20:1100,57,0	1/1:2,15:17:42.14:811,42,0
chr10	4809109	.	C	CCT	14912.54	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-2.657;DP=819;FS=0.568;HRun=0;HaplotypeScore=138.0774;InbreedingCoeff=0.9997;MQ=67.13;MQ0=1;MQRankSum=-1.694;QD=49.87;ReadPosRankSum=3.051;VQSLOD=5.0634;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,28:39:93.24:1640,93,0	0/0:15,0:15:38.89:0,39,318	0/0:30,0:30:81.27:0,81,1277	0/0:36,0:31:85.96:0,86,1308	0/0:22,0:22:65.82:0,66,539	0/0:27,0:27:72.16:0,72,1135	0/0:34,0:34:99:0,99,1570	1/1:1,33:34:99:1851,99,0	0/0:30,0:30:83.98:0,84,1263	0/0:31,0:31:90.31:0,90,1455	0/0:12,0:12:36.09:0,36,535	0/0:44,0:44:99:0,125,957	0/0:30,0:30:86.61:0,87,711	0/0:35,0:35:95.67:0,96,785	1/1:0,38:37:93.32:1851,93,0	1/1:0,29:29:78.27:1525,78,0	1/1:2,45:47:99:2183,108,0	1/1:0,25:25:72.25:1412,72,0	0/0:22,0:22:54.18:0,54,876	0/0:18,0:18:54.18:0,54,872	0/0:64,0:64:99:0,179,1260	0/0:17,0:17:48.15:0,48,750	0/0:11,0:11:26.84:0,27,209	0/0:42,0:42:99:0,123,916	1/1:0,21:22:51.18:1027,51,0	1/1:4,19:23:66.68:1245,67,0	1/1:0,31:31:78.22:1572,78,0	1/1:1,10:10:30.10:607,30,0
chr10	4810437	.	AATAT	A	1409.74	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=8.540;DP=488;FS=79.211;HRun=0;HaplotypeScore=97.5801;InbreedingCoeff=0.9083;MQ=66.34;MQ0=1;MQRankSum=-7.664;QD=35.24;ReadPosRankSum=2.643;VQSLOD=0.7034;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:90.31:0,90,2368	0/0:9,0:9:27.09:0,27,712	0/0:13,0:12:27.09:0,27,685	0/0:27,0:26:69.23:0,69,1677	0/0:19,0:19:45.15:0,45,1186	0/0:23,0:23:63.22:0,63,1660	0/0:21,0:21:60.21:0,60,1578	0/0:20,0:20:60.21:0,60,1576	0/0:29,0:29:78.27:0,78,2049	0/0:22,0:22:60.20:0,60,1531	0/0:13,0:13:36.12:0,36,947	0/0:30,0:30:75.26:0,75,1952	0/0:17,0:17:48.16:0,48,1265	0/0:20,0:20:48.16:0,48,1241	1/1:2,13:15:36.12:654,36,0	0/0:19,0:18:51.18:0,51,1338	0/0:29,0:29:87.30:0,87,2294	1/1:0,1:1:3.01:55,3,0	0/0:12,0:12:36.12:0,36,950	0/0:13,0:13:39.13:0,39,1029	0/0:22,0:22:57.20:0,57,1504	0/0:18,0:18:48.16:0,48,1247	0/0:19,0:19:48.16:0,48,1264	0/0:19,0:19:51.18:0,51,1343	1/1:2,3:5:9.03:161,9,0	1/1:1,6:7:21.07:382,21,0	1/1:5,2:7:3.01:55,3,0	1/1:0,5:5:15.05:273,15,0
chr10	4810637	.	TTTTTTTTTTTTTTTTGGAGCTG	T	5285.90	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.570;DP=455;FS=0.685;HRun=0;HaplotypeScore=220.5985;InbreedingCoeff=0.9386;MQ=61.73;MQ0=12;MQRankSum=-6.604;QD=89.59;ReadPosRankSum=5.435;VQSLOD=3.8317;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,32:32:51.18:2662,51,0	0/0:2,0:2:6.02:0,6,509	0/0:20,0:7:21.07:0,21,581	0/0:13,0:12:24.88:0,25,902	0/0:12,0:12:33.10:0,33,2003	0/0:24,0:23:63.22:0,63,4407	0/0:24,0:24:69.24:0,69,5293	0/0:32,0:30:81.28:0,81,4003	0/0:14,0:14:42.14:0,42,2900	0/0:18,0:18:48.16:0,48,3263	0/0:9,0:9:24.08:0,24,1276	0/0:23,0:23:69.24:0,69,4292	0/0:16,0:16:48.16:0,48,2928	0/0:14,0:14:39.13:0,39,2500	0/0:19,0:19:57.20:0,57,3574	1/1:0,11:11:30.57:1750,31,0	1/1:1,13:12:15.05:874,15,0	0/0:15,0:15:39.10:0,39,2000	0/0:19,0:19:51.18:0,51,3185	0/0:6,0:5:15.05:0,15,1034	0/0:22,0:21:57.20:0,57,3349	0/0:14,0:14:36.12:0,36,2117	0/0:12,0:12:33.11:0,33,2318	0/0:22,0:22:49.12:0,49,3586	0/0:6,0:6:15.05:0,15,727	0/0:19,0:19:51.18:0,51,3097	0/0:13,0:13:24.08:0,24,1690	0/0:8,0:6:15.05:0,15,1141
chr10	4810804	.	GTTTA	G	1145.28	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.296;DP=602;FS=1.669;HRun=0;HaplotypeScore=108.8005;InbreedingCoeff=0.9983;MQ=67.59;MQ0=0;MQRankSum=1.036;QD=40.90;ReadPosRankSum=2.941;VQSLOD=4.2555;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,154,3673	0/0:15,0:15:45.15:0,45,1133	0/0:17,0:16:36.09:0,36,784	0/0:19,0:18:33.18:0,33,741	0/0:26,0:26:75.26:0,75,1932	0/0:25,0:25:75.26:0,75,1949	0/0:15,0:15:39.12:0,39,946	0/0:32,0:32:75.26:0,75,1864	0/0:20,0:20:57.20:0,57,1480	0/0:21,0:21:48.16:0,48,1227	0/0:17,0:17:51.18:0,51,1271	0/0:22,0:22:63.22:0,63,1631	0/0:16,0:16:42.14:0,42,1080	0/0:12,0:12:33.11:0,33,807	0/0:27,0:27:63.21:0,63,1579	0/0:22,0:22:57.19:0,57,1447	1/1:0,28:28:69.24:1240,69,0	0/0:11,0:11:30.10:0,30,776	0/0:29,0:29:69.24:0,69,1729	0/0:23,0:23:63.21:0,63,1581	0/0:18,0:18:48.16:0,48,1193	0/0:27,0:27:75.26:0,75,1899	0/0:20,0:20:57.20:0,57,1458	0/0:12,0:12:36.12:0,36,906	0/0:12,0:12:33.11:0,33,857	0/0:26,0:26:75.26:0,75,1948	0/0:17,0:16:39.13:0,39,919	0/0:20,0:20:51.18:0,51,1305
chr10	4811784	.	C	CTTTGGAGGAA	18371.72	PASS	AB=0.872;AC=19;AF=0.339;AN=56;BaseQRankSum=4.194;DP=748;FS=2.782;HRun=0;HaplotypeScore=317.6131;InbreedingCoeff=0.6117;MQ=80.63;MQ0=0;MQRankSum=-16.855;QD=62.70;ReadPosRankSum=-5.508;VQSLOD=3.1601;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:27,11:38:99:2976,105,0	0/0:16,0:16:21.83:0,22,995	0/0:35,0:35:86.68:0,87,1922	0/0:26,0:27:2.28:0,2,1008	0/0:33,0:33:74.08:0,74,2001	0/0:26,0:26:53.60:0,54,1709	0/0:25,0:25:19.54:0,20,1510	1/1:25,0:24:72.23:1748,72,0	0/0:30,0:30:38.57:0,39,1929	0/0:44,0:44:43.01:0,43,2450	0/0:22,0:22:35.53:0,36,1323	0/0:39,0:39:79.79:0,80,2386	0/1:34,0:34:1.39:1,0,1934	0/0:27,0:27:29.11:0,29,1562	1/1:21,11:32:88.52:2885,89,0	1/1:21,11:32:86.75:2589,87,0	1/1:12,2:14:36.11:1016,36,0	0/1:10,3:13:55.27:963,0,55	0/0:22,0:22:39.73:0,40,1376	0/0:25,0:25:43.17:0,43,1525	0/0:38,0:38:36.22:0,36,2265	0/0:23,0:23:62:0,62,1381	0/1:24,0:24:8.14:8,0,1240	0/0:23,0:23:69.23:0,69,1626	0/1:13,7:20:27.59:1352,0,28	0/1:28,9:37:99:2810,0,104	1/1:12,6:18:41.73:1524,42,0	1/1:5,1:6:18.06:500,18,0
chr10	4811786	.	T	TCAGAAGATCATG	35384.46	PASS	AB=0.845;AC=14;AF=0.250;AN=56;BaseQRankSum=13.309;DP=882;FS=0.844;HRun=0;HaplotypeScore=463.2621;InbreedingCoeff=0.3927;MQ=76.10;MQ0=0;MQRankSum=-21.568;QD=96.42;ReadPosRankSum=3.290;VQSLOD=3.9988;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:43,11:54:99:5063,0,175	0/0:17,0:17:45.15:0,45,1670	0/0:37,0:37:99:0,103,3109	0/0:27,0:27:58.95:0,59,1782	0/0:33,0:33:99:0,99,3416	0/0:27,0:27:78.25:0,78,2637	0/0:25,0:25:75.25:0,75,2665	0/1:53,0:52:52.36:3615,0,52	0/0:30,0:30:87.29:0,87,3193	0/0:44,0:44:99:0,129,4453	0/0:21,0:21:58.08:0,58,2174	0/0:39,0:39:99:0,115,4059	0/0:33,0:33:99:0,99,3409	0/0:25,0:25:75.24:0,75,2621	0/1:37,11:51:99:4676,0,145	1/1:33,11:48:17.52:5783,18,0	1/1:18,2:20:4.87:2167,5,0	0/1:13,3:16:99:1280,0,122	0/0:23,0:23:69.19:0,69,2323	0/0:25,0:25:69.24:0,69,2575	0/0:36,0:36:99:0,107,3877	0/0:25,0:25:71.04:0,71,2334	0/0:24,0:24:69.21:0,69,2184	0/0:24,0:24:72.23:0,72,2637	0/1:24,7:35:78.99:3728,0,79	0/1:42,9:50:99:4770,0,418	1/1:24,6:31:68.01:3819,68,0	1/1:7,1:8:15.99:484,16,0
chr10	4811787	.	T	TG	6260.87	PASS	AB=0.713;AC=17;AF=0.304;AN=56;BaseQRankSum=21.908;DP=880;FS=2.573;HRun=1;HaplotypeScore=352.5382;InbreedingCoeff=0.7498;MQ=76.47;MQ0=0;MQRankSum=-22.152;QD=17.06;ReadPosRankSum=0.023;VQSLOD=3.4745;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:35,19:54:99:975,103,0	0/0:16,0:16:48.10:0,48,526	0/0:37,0:37:63.98:0,64,936	0/0:26,0:26:50.48:0,50,477	0/0:33,0:33:89.01:0,89,984	0/0:27,0:27:42.42:0,42,753	0/0:25,0:25:72.17:0,72,789	1/1:44,10:53:50.02:891,50,0	0/0:30,0:30:85.11:0,85,939	0/0:42,0:42:99:0,119,1311	0/0:21,0:21:58.05:0,58,651	0/0:39,0:39:99:0,106,1158	0/0:33,0:33:85.33:0,85,944	0/0:25,0:25:68.87:0,69,731	1/1:39,10:49:99:901,120,0	1/1:37,11:48:99:740,104,0	1/1:14,6:20:46.90:421,47,0	0/1:9,7:16:18.58:313,0,19	0/0:24,0:24:62.72:0,63,687	0/0:25,0:25:66.19:0,66,759	0/0:36,0:36:99:0,104,1143	0/0:25,0:25:72.20:0,72,758	0/0:25,0:25:58.77:0,59,616	0/0:24,0:24:72.18:0,72,794	1/1:31,4:35:41.66:463,42,0	0/1:37,15:51:24.29:879,0,24	1/1:25,6:31:67.71:477,68,0	0/1:4,4:8:17.47:201,0,17
chr10	4811792	.	A	AAC	3759.24	PASS	AB=0.791;AC=10;AF=0.179;AN=56;BaseQRankSum=11.991;DP=832;FS=2.446;HRun=0;HaplotypeScore=241.3532;InbreedingCoeff=-0.2174;MQ=81.16;MQ0=0;MQRankSum=-11.584;QD=11.50;ReadPosRankSum=-4.616;VQSLOD=2.2714;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:33,16:49:99:817,0,625	0/0:16,0:16:48.15:0,48,759	0/0:37,0:37:99:0,111,1775	0/0:29,0:29:78.26:0,78,1243	0/0:29,0:29:87.28:0,87,1395	0/0:29,0:29:81.28:0,81,1314	0/0:25,0:25:72.23:0,72,1150	0/1:32,10:42:99:422,0,1347	0/0:29,0:29:87.30:0,87,1419	0/0:39,0:39:99:0,111,1811	0/0:22,0:22:63.22:0,63,1027	0/0:36,0:36:99:0,108,1710	0/0:32,0:32:87.28:0,87,1393	0/0:24,0:24:72.25:0,72,1174	0/1:37,7:44:99:421,0,470	0/1:34,10:44:99:447,0,741	0/1:9,6:15:99:216,0,205	0/1:11,6:17:99:223,0,342	0/0:26,0:26:78.26:0,78,1245	0/0:24,0:24:66.21:0,66,1051	0/0:37,0:37:99:0,111,1733	0/0:25,0:25:72.23:0,72,1148	0/0:22,0:22:66.23:0,66,1075	0/0:24,0:24:72.22:0,72,1145	0/1:28,4:32:99:164,0,664	0/1:31,13:43:99:675,0,984	0/1:28,4:32:99:155,0,593	0/1:4,4:8:95.94:218,0,96
chr10	4812033	.	C	CT	5585.89	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-11.409;DP=657;FS=0.000;HRun=4;HaplotypeScore=57.8423;InbreedingCoeff=0.9995;MQ=76.30;MQ0=0;MQRankSum=-1.826;QD=36.04;ReadPosRankSum=3.719;VQSLOD=4.9781;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:81.20:0,81,898	0/0:18,0:18:48.13:0,48,544	0/0:22,0:22:60.15:0,60,669	0/0:16,0:16:45.13:0,45,510	0/0:31,0:31:84.24:0,84,953	0/0:21,0:21:54.15:0,54,613	0/0:11,0:11:24.05:0,24,263	0/0:34,0:34:84.21:0,84,945	0/0:23,0:23:66.19:0,66,749	0/0:34,0:34:96.26:0,96,1081	0/0:26,0:26:75.21:0,75,851	0/0:19,0:19:57.16:0,57,647	0/0:18,0:18:51.13:0,51,569	0/0:28,0:28:69.19:0,69,782	1/1:0,26:26:69.23:944,69,0	0/0:24,0:24:69.20:0,69,783	0/0:21,0:21:60.17:0,60,681	1/1:0,27:26:72.24:985,72,0	0/0:16,0:16:48.14:0,48,544	0/0:30,0:30:84.21:0,84,933	0/0:19,0:19:51.13:0,51,569	0/0:25,0:25:72.19:0,72,808	0/0:23,0:23:69.17:0,69,764	0/0:15,0:15:42.10:0,42,466	1/1:2,27:28:66.22:903,66,0	1/1:2,29:31:56.27:1156,56,0	1/1:1,29:30:84.28:1147,84,0	1/1:1,11:11:33.11:451,33,0
chr10	4812714	.	CAAG	C	1132.78	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.132;DP=887;FS=4.014;HRun=0;HaplotypeScore=125.6187;InbreedingCoeff=0.9999;MQ=88.11;MQ0=0;MQRankSum=-2.240;QD=39.06;ReadPosRankSum=2.002;VQSLOD=4.9240;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,126,3061	0/0:13,0:13:39.13:0,39,961	0/0:33,0:33:99:0,99,1995	0/0:30,0:30:60.52:0,61,1680	0/0:21,0:21:63.21:0,63,1497	0/0:30,0:30:90.30:0,90,2168	0/0:40,0:40:99:0,120,2957	0/0:37,0:37:99:0,108,2571	0/0:46,0:46:99:0,138,3305	0/0:34,0:34:99:0,102,2508	0/0:24,0:24:72.25:0,72,1775	0/0:40,0:40:99:0,120,2934	0/0:28,0:28:84.29:0,84,2041	0/0:26,0:26:78.24:0,78,1825	0/0:41,0:41:99:0,123,3008	0/0:41,0:41:99:0,123,2973	1/1:0,29:29:66.23:1228,66,0	0/0:19,0:19:57.20:0,57,1404	0/0:24,0:24:72.21:0,72,1701	0/0:27,0:27:81.28:0,81,1996	0/0:59,0:59:99:0,178,4311	0/0:27,0:27:81.26:0,81,1882	0/0:27,0:27:78.27:0,78,1922	0/0:37,0:36:99:0,111,2699	0/0:21,0:21:63.20:0,63,1482	0/0:30,0:30:87.29:0,87,2095	0/0:43,0:43:99:0,129,3084	0/0:15,0:15:45.15:0,45,1109
chr10	4812931	.	T	TATATACA	18246.43	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-15.325;DP=750;FS=3.389;HRun=0;HaplotypeScore=148.4205;InbreedingCoeff=0.9937;MQ=83.35;MQ0=5;MQRankSum=-17.920;QD=78.31;ReadPosRankSum=4.570;VQSLOD=5.5219;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,11:25:33.11:1365,33,0	0/0:8,0:8:21.05:0,21,453	0/0:38,0:38:99:0,108,2571	0/0:18,0:18:51.12:0,51,1055	0/0:27,0:27:78.25:0,78,2057	0/0:26,0:26:78.22:0,78,1834	0/0:17,0:17:48.16:0,48,1288	0/0:37,0:37:99:0,105,2701	0/0:39,0:39:99:0,117,2966	0/0:39,0:39:99:0,117,3016	0/0:27,0:27:81.27:0,81,2096	0/0:31,0:31:93.31:0,93,2427	0/0:28,0:28:81.26:0,81,2147	0/0:33,0:33:99:0,99,2496	1/1:4,23:33:63.08:2608,63,0	1/1:0,30:34:72.72:3009,73,0	1/1:3,7:12:15.05:626,15,0	1/1:0,11:15:21.07:879,21,0	0/0:14,0:14:42.14:0,42,1076	0/0:37,0:37:99:0,111,2885	0/0:21,0:21:63.20:0,63,1674	0/0:29,0:29:87.30:0,87,2322	0/0:27,0:27:81.25:0,81,2064	0/0:21,0:21:63.20:0,63,1566	1/1:0,23:24:60.21:2495,60,0	1/1:6,33:39:96.26:3495,96,0	1/1:4,29:36:78.27:3142,78,0	1/1:0,6:10:15.05:627,15,0
chr10	4813177	.	T	TA	3505.84	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-12.195;DP=831;FS=1.418;HRun=1;HaplotypeScore=85.0787;InbreedingCoeff=0.9997;MQ=74.91;MQ0=0;MQRankSum=-0.782;QD=38.53;ReadPosRankSum=2.536;VQSLOD=4.3229;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,51:54:99:2202,147,0	0/0:10,0:10:30.08:0,30,375	0/0:18,0:18:48.02:0,48,551	0/0:15,0:15:41.95:0,42,427	0/0:23,0:23:69.19:0,69,865	0/0:26,0:26:66.21:0,66,856	0/0:41,0:41:99:0,117,1490	0/0:29,0:29:81.26:0,81,1042	0/0:31,0:31:90.28:0,90,1152	0/0:33,0:33:99:0,99,1233	0/0:31,0:31:87.28:0,87,1118	0/0:40,0:40:99:0,120,1557	0/0:24,0:24:72.23:0,72,935	0/0:33,0:33:90.29:0,90,1168	0/0:39,0:39:99:0,117,1490	1/1:1,36:37:87.29:1304,87,0	0/0:33,0:33:99:0,99,1274	0/0:24,0:24:68.63:0,69,817	0/0:18,0:18:54.18:0,54,700	0/0:24,0:24:72.23:0,72,932	0/0:49,0:49:99:0,147,1863	0/0:24,0:24:72.23:0,72,935	0/0:21,0:21:60.19:0,60,776	0/0:44,0:44:99:0,132,1685	0/0:23,0:23:69.22:0,69,895	0/0:29,0:29:84.25:0,84,1061	0/0:40,0:40:99:0,114,1435	0/0:18,0:17:48.08:0,48,578
chr10	4813463	.	ACT	A	4980.26	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=15.367;DP=712;FS=0.000;HRun=0;HaplotypeScore=95.4072;InbreedingCoeff=0.9988;MQ=86.50;MQ0=0;MQRankSum=-4.025;QD=36.89;ReadPosRankSum=2.924;VQSLOD=6.9944;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,150,2734	0/0:11,0:11:33.08:0,33,545	0/0:25,0:25:71.77:0,72,1141	0/0:25,0:25:53.74:0,54,980	0/0:21,0:21:63.20:0,63,1138	0/0:30,0:30:90.26:0,90,1589	0/0:35,0:35:99:0,105,1931	0/0:20,0:20:54.17:0,54,951	0/0:27,0:27:75.22:0,75,1311	0/0:17,0:17:48.16:0,48,899	0/0:18,0:18:51.17:0,51,955	0/0:27,0:27:81.26:0,81,1464	0/0:24,0:24:69.24:0,69,1280	0/0:28,0:28:84.26:0,84,1499	1/1:1,34:35:96.32:1408,96,0	0/0:23,0:23:69.24:0,69,1292	0/0:23,0:23:66.20:0,66,1200	1/1:3,19:22:51.17:751,51,0	0/0:29,0:29:84.26:0,84,1499	0/0:20,0:20:60.21:0,60,1122	0/0:52,0:52:99:0,156,2786	0/0:24,0:24:71.91:0,72,1287	0/0:12,0:12:36.12:0,36,667	0/0:35,0:35:96.29:0,96,1761	1/1:1,14:15:36.12:521,36,0	1/1:3,24:27:21.93:959,22,0	1/1:1,26:27:69.23:1016,69,0	1/1:0,9:9:24:326,24,0
chr10	4813575	.	CCA	C	629.69	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=12.522;DP=595;FS=3.552;HRun=0;HaplotypeScore=89.6317;InbreedingCoeff=0.9843;MQ=80.58;MQ0=1;MQRankSum=-1.656;QD=5.04;ReadPosRankSum=2.093;VQSLOD=2.6651;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,117,1913	0/0:6,0:6:14.98:0,15,220	0/0:25,0:24:66.17:0,66,944	0/0:24,0:23:39.01:0,39,581	0/0:16,0:16:45.15:0,45,756	0/0:17,0:17:45.15:0,45,755	0/0:23,0:23:66.20:0,66,1063	1/1:3,12:15:33.11:426,33,0	0/0:24,0:24:66.23:0,66,1106	0/0:17,0:17:51.17:0,51,850	0/0:12,0:12:27.07:0,27,419	0/0:32,0:32:93.32:0,93,1563	0/0:20,0:20:57.18:0,57,924	0/0:24,0:24:66.20:0,66,1068	1/1:18,0:18:26.43:70,26,0	0/0:29,0:28:75.23:0,75,1202	0/0:0,0:26:53.99:0,54,467	1/1:34,0:33:41.64:111,42,0	0/0:24,0:24:63.15:0,63,980	0/0:11,0:11:30.03:0,30,463	0/0:38,0:38:99:0,99,1627	0/0:10,0:10:27.09:0,27,454	0/0:10,0:10:27.09:0,27,440	0/0:37,0:37:99:0,99,1500	1/1:18,0:18:23.28:62,23,0	1/1:15,0:15:20.68:75,21,0	1/1:18,0:18:21.77:57,22,0	1/1:7,0:7:9.33:25,9,0
chr10	4813576	.	CA	C	4036.78	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=9.139;DP=589;FS=2.847;HRun=1;HaplotypeScore=65.6992;InbreedingCoeff=0.8964;MQ=80.72;MQ0=1;MQRankSum=-2.527;QD=32.82;ReadPosRankSum=2.996;VQSLOD=3.4577;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,126,1798	0/0:6,0:6:17.99:0,18,228	0/0:26,0:25:72.19:0,72,948	0/0:24,0:23:69.08:0,69,829	0/0:16,0:16:48.13:0,48,694	0/0:17,0:17:51.16:0,51,732	0/0:24,0:24:72.20:0,72,1017	0/1:14,0:14:28.72:57,0,29	0/0:24,0:24:72.22:0,72,1041	0/0:17,0:17:51.17:0,51,763	0/0:12,0:12:30.08:0,30,410	0/0:32,0:32:96.32:0,96,1421	0/0:20,0:20:60.19:0,60,863	0/0:24,0:24:72.08:0,72,994	1/1:0,18:18:51.17:712,51,0	0/0:29,0:28:84.23:0,84,1153	0/0:25,0:24:53.91:0,54,468	1/1:0,34:33:87.29:1202,87,0	0/0:23,0:23:69.17:0,69,961	0/0:11,0:11:32.99:0,33,426	0/0:37,0:37:99:0,105,1518	0/0:9,0:9:27.09:0,27,404	0/0:10,0:10:30.10:0,30,434	0/0:37,0:37:99:0,102,1359	1/1:0,18:18:45.15:626,45,0	1/1:1,13:14:42.13:565,42,0	1/1:0,18:18:45.15:622,45,0	1/1:0,7:7:18.06:251,18,0
chr10	4815824	.	AGCAGAAGCAGAGCCTGT	A	660.22	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=3.667;DP=681;FS=10.490;HRun=0;HaplotypeScore=363.7650;InbreedingCoeff=0.9209;MQ=81.49;MQ0=0;MQRankSum=-3.763;QD=33.01;ReadPosRankSum=1.071;VQSLOD=1.0692;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,4:13:12.04:565,12,0	0/0:13,0:14:41.48:0,41,2601	0/0:21,0:21:51.18:0,51,3031	0/0:27,0:27:56.93:0,57,3134	0/0:21,0:21:48.16:0,48,3219	0/0:26,0:26:51.18:0,51,3809	0/0:27,0:27:54.17:0,54,3333	0/0:19,0:19:45.15:0,45,2842	0/0:22,0:22:42.14:0,42,3032	0/0:28,0:28:69.24:0,69,5295	0/0:14,0:14:28.34:0,28,1986	0/0:33,0:33:78.27:0,78,5784	0/0:27,0:27:53.96:0,54,4013	0/0:37,0:37:84.29:0,84,6064	0/0:39,0:39:75.26:0,75,5336	1/1:6,1:7:6.02:201,6,0	0/0:46,0:47:87.30:0,87,5901	0/0:26,0:27:74.24:0,74,5017	0/0:16,0:16:36.12:0,36,2057	0/0:17,0:17:39.09:0,39,2875	0/0:47,0:47:99:0,108,7829	0/0:25,0:25:54.19:0,54,4172	0/0:7,0:7:18.06:0,18,1379	0/0:42,0:44:90.31:0,90,6966	0/0:14,0:14:30.10:0,30,2214	0/0:22,0:22:54.19:0,54,3726	0/0:23,0:23:39.12:0,39,2347	0/0:17,0:17:39.13:0,39,3052
chr10	4816402	.	GAC	G	1837.49	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.839;DP=744;FS=8.436;HRun=0;HaplotypeScore=86.5075;InbreedingCoeff=0.9995;MQ=84.93;MQ0=0;MQRankSum=-2.738;QD=29.17;ReadPosRankSum=0.523;VQSLOD=5.1618;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,151,2597	0/0:15,0:15:45.15:0,45,773	0/0:27,0:27:66.20:0,66,1074	0/0:20,0:20:51.14:0,51,815	0/0:26,0:26:66.23:0,66,1139	0/0:29,0:29:81.26:0,81,1366	0/0:23,0:23:60.18:0,60,1010	0/0:25,0:24:63.22:0,63,1090	0/0:24,0:24:72.23:0,72,1215	0/0:29,0:29:75.26:0,75,1288	0/0:10,0:10:27.09:0,27,467	0/0:39,0:39:99:0,108,1871	0/0:27,0:27:69.24:0,69,1180	0/0:27,0:28:78.26:0,78,1326	0/0:28,0:28:78.27:0,78,1351	0/0:21,0:21:57.20:0,57,983	0/0:49,0:49:99:0,126,2179	0/0:34,0:34:99:0,99,1699	0/0:20,0:20:48.16:0,48,825	0/0:14,0:14:33.11:0,33,572	0/0:35,0:35:99:0,99,1709	0/0:26,0:26:75.26:0,75,1290	0/0:18,0:18:48.16:0,48,831	0/0:28,0:28:78.27:0,78,1346	0/0:34,0:34:96.32:0,96,1629	1/1:6,19:25:57.17:742,57,0	1/1:4,17:21:51.17:679,51,0	1/1:0,17:17:42.14:559,42,0
chr10	4817355	.	C	CT	4455.09	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-10.811;DP=677;FS=1.129;HRun=9;HaplotypeScore=114.0145;InbreedingCoeff=0.9942;MQ=79.63;MQ0=0;MQRankSum=-2.274;QD=27.00;ReadPosRankSum=0.124;VQSLOD=3.4307;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,46:52:99:1421,129,0	0/0:11,0:11:26.98:0,27,231	0/0:27,0:27:47.26:0,47,396	0/0:9,0:9:14.67:0,15,115	0/0:22,0:23:59.02:0,59,501	0/0:27,0:27:80.97:0,81,700	0/0:23,0:23:52.95:0,53,437	1/1:5,22:27:19.92:642,20,0	0/0:22,0:23:55.95:0,56,461	0/0:30,0:31:77:0,77,657	0/0:14,0:14:41.99:0,42,365	0/0:34,0:34:92.93:0,93,797	0/0:17,0:17:50.98:0,51,439	0/0:20,0:20:56.99:0,57,495	0/0:30,0:30:74.93:0,75,638	0/0:19,0:20:52.98:0,53,440	1/1:3,28:31:78.21:863,78,0	0/0:37,0:37:92.94:0,93,803	0/0:35,0:35:83.97:0,84,727	0/0:27,0:27:66.05:0,66,592	0/0:27,0:27:77.97:0,78,674	0/0:13,0:13:32.99:0,33,286	0/0:17,0:17:44.97:0,45,386	0/0:21,0:21:59.96:0,60,517	0/0:26,0:26:71.96:0,72,621	1/1:3,17:20:28.09:538,28,0	1/1:4,23:27:69.18:758,69,0	1/1:0,8:8:21.06:232,21,0
chr10	4817680	.	TG	T	3773.73	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=10.729;DP=521;FS=8.725;HRun=8;HaplotypeScore=61.1250;InbreedingCoeff=0.9865;MQ=91.40;MQ0=1;MQRankSum=-4.580;QD=21.44;ReadPosRankSum=2.775;VQSLOD=3.9092;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,21:29:60.08:578,60,0	0/0:6,0:6:18.02:0,18,202	0/0:29,0:28:60.13:0,60,722	0/0:21,0:21:12.40:0,12,332	0/0:8,0:8:21.05:0,21,242	0/0:14,0:14:24.05:0,24,267	0/0:17,0:17:48.12:0,48,547	0/0:11,0:11:15.05:0,15,180	0/0:26,0:26:75.22:0,75,894	0/0:16,0:16:45.14:0,45,541	0/0:8,0:8:21.04:0,21,227	0/0:31,0:31:84.24:0,84,990	0/0:23,0:23:63.11:0,63,703	0/0:21,0:21:60.16:0,60,704	1/1:4,16:20:51.07:491,51,0	1/1:14,0:14:31.27:171,31,0	1/1:5,20:24:54.09:521,54,0	1/1:2,28:30:69.11:666,69,0	0/0:15,0:15:30.07:0,30,343	0/0:12,0:12:33.09:0,33,386	0/0:35,0:37:87.10:0,87,992	0/0:10,0:10:30.08:0,30,352	0/0:8,0:8:21.06:0,21,253	0/0:32,0:32:61.59:0,62,1001	1/1:3,13:17:42.24:420,42,0	1/1:3,5:8:15.02:145,15,0	1/1:2,19:21:56.92:550,57,0	1/1:1,11:12:24.03:232,24,0
chr10	4817786	.	TGTACTTTGGA	T	11987.82	PASS	AB=0.519;AC=17;AF=0.304;AN=56;BaseQRankSum=14.897;DP=490;FS=10.623;HRun=0;HaplotypeScore=156.5945;InbreedingCoeff=0.9046;MQ=86.84;MQ0=0;MQRankSum=-15.574;QD=90.82;ReadPosRankSum=2.616;VQSLOD=4.5720;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,102,5071	0/0:8,0:8:24.08:0,24,1309	0/0:19,0:19:57.16:0,57,2181	0/0:23,0:23:62.55:0,63,2488	0/0:11,0:11:33.11:0,33,1694	0/0:20,0:20:60.21:0,60,3244	0/0:22,0:21:66.23:0,66,3409	1/1:0,16:16:45.15:1451,45,0	0/0:15,0:15:45.15:0,45,2474	0/0:9,0:9:27.09:0,27,1429	0/0:13,0:13:39.12:0,39,1843	0/0:34,0:34:99:0,102,5266	0/0:21,0:21:63.22:0,63,3073	0/0:19,0:19:57.20:0,57,2944	1/1:0,29:29:81.28:2828,81,0	1/1:0,16:16:39.13:1362,39,0	1/1:0,18:18:44.07:1570,44,0	1/1:0,12:12:27.09:943,27,0	0/0:14,0:14:42.14:0,42,2273	0/0:12,0:12:36.12:0,36,1927	0/0:31,0:30:90.27:0,90,4492	0/0:8,0:8:24.08:0,24,1145	0/0:17,0:17:51.18:0,51,2724	0/0:28,0:28:84.27:0,84,4316	1/1:0,11:11:30.10:1047,30,0	0/1:1,13:14:86.03:1320,0,86	1/1:0,12:12:33.11:1153,33,0	1/1:0,4:4:9.03:314,9,0
chr10	4819561	.	C	CG	2660.09	PASS	AB=1.000;AC=43;AF=0.827;AN=52;BaseQRankSum=-4.194;DP=239;FS=24.445;HRun=2;HaplotypeScore=63.4917;InbreedingCoeff=-0.0742;MQ=64.95;MQ0=0;MQRankSum=1.638;QD=11.18;ReadPosRankSum=5.879;VQSLOD=0.0859;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,0:10:23.65:174,24,0	0/1:3,0:3:13.07:13,0,14	0/0:1,0:1:0.47:0,0,1	0/1:6,0:5:5.02:5,0,39	1/1:2,0:2:2.88:15,3,0	./.	1/1:34,0:34:5.69:451,6,0	0/1:7,0:7:6.07:51,0,6	1/1:4,0:4:11.78:75,12,0	1/1:4,0:4:8.72:61,9,0	1/1:2,0:2:2.56:15,3,0	1/1:6,0:6:17.77:123,18,0	1/1:4,0:4:11.66:69,12,0	1/1:5,0:5:11.05:55,11,0	1/1:4,0:4:8.96:68,9,0	0/1:5,0:5:8.82:34,0,9	1/1:20,1:21:32.14:330,32,0	1/1:16,0:16:0.12:211,0,0	0/1:4,0:4:8.14:27,0,8	./.	1/1:52,2:54:7.32:480,7,0	1/1:5,0:5:5.84:34,6,0	1/1:2,0:2:2.88:15,3,0	1/1:18,1:19:7.61:215,8,0	1/1:6,0:6:11.90:84,12,0	0/1:11,0:11:22.71:152,0,23	0/1:2,0:2:7.36:7,0,13	1/1:2,0:2:2.94:18,3,0
chr10	4819563	.	G	GC	6659.75	PASS	AB=0.857;AC=51;AF=0.981;AN=52;BaseQRankSum=-2.420;DP=249;FS=0.000;HRun=3;HaplotypeScore=46.7785;InbreedingCoeff=-0.0842;MQ=65.20;MQ0=0;MQRankSum=-2.391;QD=26.75;ReadPosRankSum=0.256;VQSLOD=3.7299;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,11:11:24.08:334,24,0	1/1:2,1:3:3.01:42,3,0	1/1:1,0:1:2.99:24,3,0	0/1:5,1:5:27.48:27,0,43	1/1:2,0:2:3.01:42,3,0	./.	1/1:3,31:34:80.83:1109,81,0	1/1:3,4:7:15.04:195,15,0	1/1:0,4:4:12.04:168,12,0	1/1:1,3:4:12.03:149,12,0	1/1:0,2:2:2.56:42,3,0	1/1:0,7:7:18.06:252,18,0	1/1:0,4:4:12.04:168,12,0	1/1:2,4:6:12.03:151,12,0	1/1:1,3:4:9.03:126,9,0	1/1:1,4:5:9.02:110,9,0	1/1:4,17:21:54.14:704,54,0	1/1:3,14:17:42.12:557,42,0	1/1:4,2:6:12.02:138,12,0	./.	1/1:10,48:58:84.27:1168,84,0	1/1:1,4:5:6.02:84,6,0	1/1:1,1:2:3.01:42,3,0	1/1:5,14:19:36.03:466,36,0	1/1:0,7:7:12.04:168,12,0	1/1:3,7:10:24.08:330,24,0	1/1:1,1:2:3:25,3,0	1/1:0,2:2:3.01:42,3,0
chr10	4820914	.	T	TG	1786.93	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-6.713;DP=474;FS=2.670;HRun=5;HaplotypeScore=47.5380;InbreedingCoeff=0.9349;MQ=72.98;MQ0=0;MQRankSum=-2.630;QD=33.72;ReadPosRankSum=2.715;VQSLOD=4.0194;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:87.20:0,87,926	0/0:7,0:7:18.04:0,18,193	0/0:10,0:9:17.90:0,18,159	0/0:11,0:11:18.67:0,19,199	0/0:13,0:13:39.10:0,39,418	0/0:25,0:25:66.14:0,66,699	0/0:21,0:21:57.14:0,57,613	0/0:19,0:19:48.05:0,48,493	0/0:9,0:9:21.05:0,21,226	0/0:13,0:13:33.08:0,33,354	0/0:11,0:11:27.07:0,27,290	0/0:23,0:23:63.15:0,63,677	0/0:17,0:17:48.12:0,48,516	0/0:16,0:16:45.11:0,45,483	0/0:23,0:23:60.15:0,60,643	0/0:28,0:28:78.18:0,78,830	0/0:28,0:28:81.20:0,81,870	0/0:24,0:24:60.14:0,60,643	0/0:15,0:15:42.11:0,42,451	0/0:11,0:11:33.08:0,33,355	0/0:27,0:27:66.11:0,66,683	0/0:2,0:2:6.02:0,6,64	0/0:3,0:3:9.02:0,9,97	0/0:16,0:16:45.11:0,45,483	0/0:17,0:17:45.11:0,45,483	1/1:2,15:17:48.16:627,48,0	1/1:0,19:18:48.16:632,48,0	1/1:0,17:17:51.17:671,51,0
chr10	4821007	.	G	GT	582.27	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=-4.920;DP=523;FS=8.149;HRun=10;HaplotypeScore=54.1036;InbreedingCoeff=0.5441;MQ=71.30;MQ0=1;MQRankSum=0.695;QD=12.13;ReadPosRankSum=0.881;VQSLOD=2.5127;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,27:33:63.16:672,63,0	0/0:11,0:11:26.97:0,27,222	0/0:7,0:8:7.93:0,8,86	0/1:15,0:13:14.94:15,0,127	0/0:26,0:26:73.87:0,74,584	0/0:19,0:19:41.89:0,42,337	0/0:15,0:15:44.95:0,45,370	0/0:32,0:32:80.88:0,81,663	0/0:13,0:13:38.95:0,39,320	0/0:25,0:25:58.88:0,59,465	0/0:17,0:19:36.92:0,37,274	0/0:11,0:11:29.90:0,30,236	0/0:17,0:17:47.91:0,48,388	0/0:17,0:17:49.98:0,50,400	0/0:17,0:18:49.94:0,50,396	0/0:19,0:20:49.98:0,50,400	0/0:29,0:28:71.90:0,72,591	0/0:28,0:28:77.88:0,78,636	0/0:22,0:22:44.91:0,45,367	0/0:19,0:19:56.94:0,57,468	0/0:9,0:9:26.97:0,27,222	0/0:7,0:7:20.97:0,21,171	0/0:12,1:13:6.88:0,7,255	0/0:16,0:17:46.72:0,47,362	0/0:27,0:27:68.87:0,69,559	0/0:28,0:29:76.91:0,77,618	0/0:16,0:15:38.95:0,39,320	0/0:7,0:7:5.97:0,6,49
chr10	4822009	.	C	CT	2876.16	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-11.843;DP=719;FS=19.289;HRun=2;HaplotypeScore=69.8174;InbreedingCoeff=0.9956;MQ=80.94;MQ0=0;MQRankSum=-5.400;QD=36.87;ReadPosRankSum=3.040;VQSLOD=1.9101;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,111,1375	0/0:17,0:17:42.13:0,42,520	0/0:25,0:25:71.06:0,71,797	0/0:34,0:34:67.13:0,67,1082	0/0:24,0:24:69.20:0,69,840	0/0:21,0:21:63.20:0,63,781	0/0:27,0:27:78.20:0,78,927	0/0:36,0:36:99:0,102,1243	0/0:20,0:20:51.16:0,51,632	0/0:26,0:26:75.23:0,75,919	0/0:7,0:7:18.06:0,18,223	0/0:37,0:37:99:0,108,1308	0/0:20,0:20:60.19:0,60,744	0/0:26,0:26:72.23:0,72,892	1/1:1,32:33:87.29:1253,87,0	0/0:29,0:29:81.24:0,81,991	0/0:32,0:32:87.27:0,87,1077	1/1:1,23:24:66.22:947,66,0	0/0:22,0:22:66.20:0,66,802	0/0:21,0:21:60.15:0,60,706	0/0:39,0:39:99:0,114,1413	0/0:29,0:29:81.22:0,81,978	0/0:12,0:12:36.11:0,36,446	0/0:31,0:31:90.28:0,90,1114	1/1:1,20:21:57.19:819,57,0	0/0:28,0:28:84.26:0,84,1031	0/0:33,0:33:99:0,99,1212	0/0:7,0:7:21.07:0,21,259
chr10	4822804	.	G	GCGCA	368.76	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=6.470;DP=618;FS=2.710;HRun=0;HaplotypeScore=113.3164;InbreedingCoeff=0.7588;MQ=66.51;MQ0=1;MQRankSum=-1.799;QD=5.19;ReadPosRankSum=-3.435;VQSLOD=1.6175;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:28:4.52:5,0,457	0/0:7,0:7:21.07:0,21,436	0/0:15,0:10:21.25:0,21,425	0/0:22,0:15:21.48:0,21,454	0/0:22,0:22:66.21:0,66,1324	0/0:12,0:11:30.10:0,30,558	0/0:34,0:34:99:0,99,2018	0/0:28,0:28:78.24:0,78,1474	0/0:18,0:18:54.15:0,54,1016	0/0:20,0:20:60.20:0,60,1198	0/0:6,0:6:14.26:0,14,312	0/0:28,0:28:84.27:0,84,1685	0/0:15,0:15:42.14:0,42,872	0/0:25,0:25:72.23:0,72,1444	1/1:7,2:9:10.65:180,11,0	0/0:24,0:24:72.23:0,72,1422	0/0:34,0:34:99:0,102,2019	1/1:27,1:28:5.04:225,5,0	0/0:31,0:31:87.26:0,87,1720	0/0:13,0:13:36.12:0,36,701	0/0:84,0:84:99:0,241,4752	0/0:12,0:12:33.07:0,33,579	0/0:11,0:11:33.10:0,33,633	0/0:54,0:54:99:0,159,3114	1/1:5,1:6:5.51:82,6,0	0/0:10,0:10:30.09:0,30,567	0/0:8,0:8:24.08:0,24,458	0/0:14,0:14:39.13:0,39,711
chr10	4822947	.	A	AT	3049.88	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-1.158;DP=616;FS=9.099;HRun=10;HaplotypeScore=68.4225;InbreedingCoeff=0.9906;MQ=75.11;MQ0=1;MQRankSum=-1.767;QD=21.78;ReadPosRankSum=0.265;VQSLOD=4.2996;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:77.86:0,78,640	0/0:9,0:9:23.97:0,24,197	0/0:17,0:16:29.86:0,30,238	0/0:13,0:13:12.87:0,13,134	0/0:22,0:23:46.96:0,47,375	0/0:14,0:13:35.94:0,36,296	0/0:19,1:20:15.95:0,16,337	1/1:12,20:32:60.15:640,60,0	0/0:15,0:15:35.92:0,36,296	0/0:35,0:35:95.86:0,96,785	0/0:14,0:14:26.94:0,27,222	0/0:31,0:31:77.88:0,78,640	0/0:17,0:17:50.94:0,51,419	0/0:16,0:16:47.93:0,48,391	1/1:4,15:20:38.93:398,39,0	1/1:1,19:20:48.12:512,48,0	1/1:3,24:27:63.15:665,63,0	1/1:2,18:21:53.96:553,54,0	0/0:33,0:33:68.86:0,69,563	0/0:11,0:12:23:0,23,178	0/0:23,0:23:50.92:0,51,419	0/0:38,0:38:86.86:0,87,714	0/0:21,0:21:53.89:0,54,437	0/0:36,0:36:83.83:0,84,686	1/1:2,17:20:26.58:470,27,0	0/0:25,1:26:42.93:0,43,559	0/0:13,0:13:35.96:0,36,296	0/0:16,0:16:44.95:0,45,369
chr10	4824348	.	A	AC	5613.36	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-12.080;DP=737;FS=0.738;HRun=1;HaplotypeScore=69.1285;InbreedingCoeff=0.9993;MQ=88.62;MQ0=1;MQRankSum=-1.970;QD=40.10;ReadPosRankSum=2.815;VQSLOD=5.5540;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,38:39:99:1572,105,0	0/0:11,0:11:33.11:0,33,428	0/0:32,0:32:93.23:0,93,1156	0/0:25,0:25:65.76:0,66,850	0/0:17,0:17:48.16:0,48,623	0/0:29,0:29:87.28:0,87,1128	0/0:26,0:26:78.22:0,78,981	0/0:30,0:30:84.26:0,84,1078	0/0:36,0:36:99:0,105,1363	0/0:19,0:19:54.18:0,54,701	0/0:12,0:12:33.10:0,33,413	0/0:34,0:34:96.31:0,96,1245	0/0:27,0:27:78.22:0,78,982	0/0:31,0:31:93.28:0,93,1178	1/1:0,39:39:99:1529,102,0	0/0:26,0:26:78.25:0,78,1012	0/0:40,0:40:99:0,117,1485	1/1:0,36:36:99:1525,102,0	0/0:16,0:16:48.15:0,48,616	0/0:18,0:18:54.17:0,54,697	0/0:45,0:44:99:0,129,1659	0/0:14,0:14:39.10:0,39,473	0/0:9,0:9:24.08:0,24,311	0/0:35,0:35:99:0,105,1362	1/1:1,25:26:66.22:988,66,0	0/0:20,0:20:57.18:0,57,736	0/0:22,0:22:63.20:0,63,816	0/0:23,0:23:66.21:0,66,854
chr10	4826518	.	T	TG	3774.92	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-12.948;DP=830;FS=1.369;HRun=1;HaplotypeScore=78.0283;InbreedingCoeff=0.9999;MQ=81.93;MQ0=0;MQRankSum=-2.006;QD=40.16;ReadPosRankSum=1.610;VQSLOD=4.3412;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,150,1913	0/0:12,0:12:33.08:0,33,401	0/0:27,0:27:78.10:0,78,886	0/0:20,0:20:57.53:0,58,669	0/0:19,0:19:57.19:0,57,738	0/0:28,0:28:81.25:0,81,1035	0/0:29,0:29:87.24:0,87,1086	0/0:30,0:30:81.22:0,81,999	0/0:28,0:28:81.26:0,81,1051	0/0:33,0:33:99:0,99,1285	0/0:23,0:23:69.21:0,69,880	0/0:38,0:38:99:0,111,1440	0/0:24,0:24:72.19:0,72,897	0/0:40,0:40:99:0,120,1515	1/1:0,42:42:99:1663,111,0	0/0:28,0:28:84.27:0,84,1084	0/0:37,0:37:99:0,102,1322	1/1:1,22:23:66.22:989,66,0	0/0:22,0:22:63.19:0,63,805	0/0:24,0:24:66.21:0,66,856	0/0:50,0:50:99:0,147,1886	0/0:24,0:24:69.14:0,69,859	0/0:26,0:26:78.25:0,78,1000	0/0:50,0:50:99:0,150,1867	1/1:2,27:29:75.25:1123,75,0	0/0:28,0:28:84.27:0,84,1090	0/0:29,0:29:84.26:0,84,1076	0/0:17,0:17:51.17:0,51,662
chr10	4826917	.	GTA	G	811.69	PASS	AB=0.938;AC=7;AF=0.130;AN=54;BaseQRankSum=7.065;DP=588;FS=1.504;HRun=0;HaplotypeScore=109.0192;InbreedingCoeff=0.7142;MQ=60.51;MQ0=1;MQRankSum=-5.048;QD=12.68;ReadPosRankSum=-0.475;VQSLOD=3.4973;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:29.87:0,30,509	0/0:10,0:10:21.07:0,21,353	./.	0/0:13,0:8:3.01:0,3,33	0/0:28,0:28:69.19:0,69,1119	0/0:28,0:28:69.19:0,69,1084	0/0:21,0:21:57.19:0,57,936	0/0:36,0:36:96.31:0,96,1570	0/0:22,0:22:54.15:0,54,827	0/0:36,0:36:96.33:0,96,1627	0/0:20,0:20:54.18:0,54,893	0/0:32,0:32:84.27:0,84,1385	0/0:23,0:23:66.23:0,66,1103	0/0:24,0:24:66.21:0,66,1071	0/0:17,0:17:22.21:0,22,103	0/0:12,0:23:44.04:0,44,408	0/0:21,0:21:54.18:0,54,893	0/1:14,1:15:33.29:33,0,82	0/0:14,0:14:39.12:0,39,637	0/0:19,0:19:51.16:0,51,833	0/0:26,0:26:63.08:0,63,998	0/0:16,0:16:33.10:0,33,526	0/0:15,0:15:39.13:0,39,659	0/0:23,0:23:54.17:0,54,868	0/0:13,2:15:9.51:0,10,48	1/1:7,13:20:20.16:491,20,0	1/1:7,18:25:33.26:385,33,0	1/1:2,2:4:3.48:40,3,0
chr10	4826938	.	T	TACACAC	2314.68	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=9.711;DP=638;FS=17.472;HRun=0;HaplotypeScore=183.0580;InbreedingCoeff=0.9459;MQ=61.08;MQ0=0;MQRankSum=-8.467;QD=16.53;ReadPosRankSum=-0.196;VQSLOD=1.6888;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:36,0:36:7.54:93,8,0	0/0:7,0:7:18.05:0,18,345	0/0:20,0:13:24.29:0,24,426	0/0:15,0:10:12.03:0,12,204	0/0:23,0:23:51.18:0,51,1087	0/0:22,0:22:63.20:0,63,1284	0/0:25,0:25:66.21:0,66,1355	0/0:39,0:39:69.21:0,69,1362	0/0:25,0:25:63.22:0,63,1316	0/0:33,0:33:72.18:0,72,1341	0/0:25,0:25:66.19:0,66,1248	0/0:31,0:32:82.15:0,82,1667	0/0:21,0:21:42.14:0,42,898	0/0:28,0:29:66.21:0,66,1321	1/1:15,1:22:16.64:382,17,0	0/0:6,0:32:16.66:0,17,90	0/0:24,0:24:60.65:0,61,1240	1/1:7,0:18:30.09:736,30,0	0/0:20,0:20:45.10:0,45,855	0/0:23,0:23:60.21:0,60,1263	0/0:27,0:27:54.17:0,54,1113	0/0:14,0:15:34:0,34,706	0/0:20,0:20:54.17:0,54,1087	0/0:20,0:20:48.14:0,48,969	1/1:14,0:20:11.86:246,12,0	1/1:11,0:11:9.03:233,9,0	1/1:28,0:28:28.28:635,28,0	1/1:5,0:5:8.95:177,9,0
chr10	4827943	.	G	GTCAAAAATGAGGTA	2069.90	PASS	AB=0.625;AC=29;AF=0.967;AN=30;BaseQRankSum=-1.733;DP=36;FS=4.150;HRun=0;HaplotypeScore=21.1436;InbreedingCoeff=-0.1827;MQ=62.39;MQ0=0;MQRankSum=-1.600;QD=64.68;ReadPosRankSum=-0.667;VQSLOD=2.5979;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,0:1:3:25,3,0	./.	1/1:0,2:3:9.03:447,9,0	0/1:2,0:5:7.62:473,0,8	1/1:1,0:1:3.01:50,3,0	1/1:1,0:1:3.01:90,3,0	./.	./.	1/1:1,0:1:3.01:49,3,0	1/1:1,0:1:3.01:57,3,0	1/1:1,0:1:3:26,3,0	1/1:1,0:1:3.01:120,3,0	1/1:3,0:3:3.01:107,3,0	./.	./.	1/1:4,0:4:6.02:168,6,0	1/1:4,0:4:12.02:219,12,0	./.	./.	1/1:2,0:2:3.01:51,3,0	./.	./.	1/1:3,0:3:9.02:125,9,0	./.	./.	1/1:1,0:1:3.01:141,3,0	./.	./.
chr10	4830189	.	GCA	G	514.51	PASS	AB=0.930;AC=17;AF=0.327;AN=52;BaseQRankSum=0.549;DP=650;FS=2.828;HRun=0;HaplotypeScore=136.7816;InbreedingCoeff=-0.3477;MQ=56.40;MQ0=15;MQRankSum=3.017;QD=1.23;ReadPosRankSum=-0.051;VQSLOD=2.7193;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:18:4.95:0,5,28	0/0:13,0:13:24.01:0,24,324	./.	./.	0/1:20,1:21:99:153,0,123	0/1:26,6:33:51.45:51,0,279	0/1:31,1:32:11.04:11,0,440	1/1:16,0:13:0.12:61,0,0	0/1:27,2:28:24.63:25,0,438	0/0:35,0:33:24.03:0,24,302	0/0:14,0:15:18.05:0,18,226	0/1:24,3:29:85.37:85,0,474	0/1:18,0:19:12.56:13,0,166	0/1:24,3:26:9.56:10,0,439	0/0:5,0:25:12.98:0,13,60	0/0:18,0:29:32.84:0,33,348	0/1:19,0:24:5.25:5,0,237	0/1:11,0:10:19.20:28,0,19	0/1:9,0:6:35.40:35,0,79	0/1:17,1:20:31.55:32,0,222	0/1:58,5:62:2.91:3,0,989	0/1:23,2:26:3.23:3,0,339	0/1:20,0:20:21.13:21,0,103	0/1:33,5:38:99:121,0,619	0/0:15,0:14:2.37:0,2,8	0/0:23,0:25:16.03:0,16,375	0/0:8,0:18:22.82:0,23,193	0/0:6,0:6:11.99:0,12,121
chr10	4830191	.	A	ACGCACG	612.62	PASS	AB=1.000;AC=6;AF=0.107;AN=56;BaseQRankSum=3.883;DP=674;FS=0.000;HRun=0;HaplotypeScore=203.1582;InbreedingCoeff=0.4623;MQ=55.02;MQ0=21;MQRankSum=-3.463;QD=7.85;ReadPosRankSum=-0.868;VQSLOD=2.5007;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:19:1.96:0,2,89	0/0:13,0:13:36.05:0,36,692	0/0:16,0:5:5.74:0,6,32	0/0:14,0:4:6.02:0,6,72	0/0:21,0:21:42.14:0,42,691	0/0:34,0:34:56.92:0,57,928	0/0:33,0:33:61.30:0,61,1480	0/0:16,0:12:34.42:0,34,490	0/0:29,0:28:63.20:0,63,1191	0/0:35,0:33:99:0,99,1683	0/0:16,0:16:29.91:0,30,540	0/0:30,0:30:75.25:0,75,1468	0/0:18,0:18:32.92:0,33,504	0/0:28,0:27:50.11:0,50,1025	0/1:26,0:25:10.20:157,0,10	0/0:29,0:29:55.89:0,56,934	0/1:24,0:24:99:171,0,451	1/1:12,0:11:24.95:318,25,0	0/0:11,0:6:18.06:0,18,351	0/0:20,0:19:48.14:0,48,824	0/0:73,0:69:99:0,126,2712	0/0:30,0:29:27.61:0,28,822	0/0:19,0:19:36.11:0,36,599	0/0:38,0:38:70.53:0,71,1679	1/1:7,9:15:2.46:92,2,0	0/0:26,0:26:68.60:0,69,1123	0/0:18,0:18:33.07:0,33,447	0/0:6,0:6:18.04:0,18,238
chr10	4830283	.	CAG	C	822.83	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=8.801;DP=1048;FS=2.857;HRun=0;HaplotypeScore=207.5526;InbreedingCoeff=0.9492;MQ=51.09;MQ0=43;MQRankSum=2.826;QD=18.29;ReadPosRankSum=-0.315;VQSLOD=3.6003;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,31:43:68.61:918,69,0	0/0:9,0:9:24.08:0,24,441	0/0:51,1:6:13.87:0,14,186	0/0:68,1:21:16.06:0,16,308	0/0:23,0:22:51.06:0,51,824	0/0:23,0:23:38.96:0,39,634	0/0:41,1:41:92.34:0,92,1898	0/0:45,0:40:98.47:0,98,1588	0/0:40,0:40:80.91:0,81,1403	0/0:38,0:37:99:0,111,1928	0/0:24,0:23:39.08:0,39,614	0/0:40,0:39:87.23:0,87,1526	0/0:29,0:29:77.98:0,78,1302	0/0:29,0:29:51.58:0,52,1012	0/0:32,0:31:23.62:0,24,457	0/0:32,0:32:75.23:0,75,1368	0/0:50,0:48:40.46:0,40,1342	0/0:35,0:33:54.29:0,54,1273	0/0:25,0:15:41.98:0,42,624	0/0:16,0:16:48:0,48,703	0/0:141,0:139:99:0,272,5292	0/0:28,0:28:53.50:0,53,897	0/0:25,0:25:36.07:0,36,762	0/0:66,0:66:99:0,145,2487	0/0:19,0:19:51.15:0,51,893	0/0:36,0:34:99:0,99,1808	0/0:28,0:28:40.37:0,40,967	0/0:6,0:6:15.05:0,15,288
chr10	4830285	.	GAC	G	317.75	PASS	AB=0.977;AC=5;AF=0.089;AN=56;BaseQRankSum=8.166;DP=1060;FS=0.642;HRun=0;HaplotypeScore=207.3360;InbreedingCoeff=0.3497;MQ=50.19;MQ0=44;MQRankSum=1.182;QD=1.57;ReadPosRankSum=0.333;VQSLOD=2.5128;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:46,0:44:50.14:367,50,0	0/0:9,0:9:24.03:0,24,368	0/0:51,0:6:13.60:0,14,195	0/1:72,1:20:6.02:6,0,177	0/0:23,0:22:45.15:0,45,734	0/0:22,0:22:36.02:0,36,540	0/0:46,1:46:79.19:0,79,1796	0/0:48,0:41:70.78:0,71,1283	0/0:41,0:41:81.18:0,81,1287	0/0:40,0:38:99:0,111,1780	0/0:20,2:21:33.02:0,33,466	0/0:40,0:39:89.79:0,90,1427	0/0:29,0:29:72.16:0,72,1121	0/0:28,1:29:25:0,25,896	0/0:32,0:31:20.77:0,21,351	0/0:29,0:29:78.25:0,78,1269	0/1:49,0:47:25.98:26,0,1139	0/1:32,2:31:37.93:38,0,1049	0/0:26,0:16:14.22:0,14,484	0/0:16,0:16:42.05:0,42,635	0/0:142,1:140:99:0,184,4556	0/0:24,1:25:48.12:0,48,758	0/0:24,0:24:45.08:0,45,679	0/0:70,0:70:99:0,149,2340	0/0:21,0:21:51.12:0,51,809	0/0:36,0:34:96.33:0,96,1589	0/0:26,1:27:20.64:0,21,851	0/0:6,0:6:17.99:0,18,268
chr10	4830445	.	GAC	G	740.21	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.162;DP=1185;FS=5.980;HRun=0;HaplotypeScore=178.0591;InbreedingCoeff=0.8611;MQ=50.41;MQ0=30;MQRankSum=-1.626;QD=8.71;ReadPosRankSum=-0.721;VQSLOD=2.8136;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:85,2:80:86.90:0,87,1997	0/0:7,0:7:15:0,15,178	0/0:35,0:4:3.28:0,3,54	0/0:49,0:7:8.91:0,9,125	0/0:28,1:28:52.69:0,53,783	0/0:32,0:32:31.11:0,31,1057	0/0:52,0:51:99:0,108,1753	0/0:55,0:50:99:0,108,1741	0/0:37,0:37:93.32:0,93,1514	0/0:65,1:62:54.54:0,55,2137	0/0:19,2:21:33.01:0,33,541	0/0:56,1:57:90.71:0,91,1971	0/0:43,0:43:99:0,120,1914	0/0:39,0:39:99:0,105,1594	1/1:16,25:39:26.07:310,26,0	0/0:43,0:43:99:0,111,1709	0/0:43,0:40:85.04:0,85,1359	1/1:9,15:24:19.81:521,20,0	0/0:38,0:25:57.19:0,57,941	0/0:23,0:22:50.98:0,51,761	0/0:123,1:122:99:0,193,4284	0/0:39,0:39:65.96:0,66,1057	0/0:18,0:18:30.09:0,30,462	0/0:66,1:67:99:0,125,2383	1/1:7,13:20:4.06:41,4,0	0/0:60,0:57:99:0,142,2137	0/0:25,0:24:56.77:0,57,838	0/0:9,0:9:26.96:0,27,349
chr10	4830495	.	CTCAT	C	199.54	PASS	AB=0.741;AC=1;AF=0.018;AN=56;BaseQRankSum=5.147;DP=1087;FS=1.096;HRun=0;HaplotypeScore=203.9775;InbreedingCoeff=-0.0183;MQ=53.20;MQ0=12;MQRankSum=-3.862;QD=9.98;ReadPosRankSum=-2.738;VQSLOD=2.7048;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:98,0:90:99:0,210,5581	0/0:10,0:10:27.09:0,27,781	0/0:38,0:14:32.23:0,32,644	0/0:46,0:18:33.41:0,33,808	0/0:16,0:15:42.08:0,42,886	0/0:19,0:19:50.95:0,51,1308	0/0:55,0:55:99:0,162,4260	0/0:51,0:47:99:0,126,3160	0/0:50,0:49:99:0,144,3861	0/0:51,0:50:99:0,144,3669	0/0:18,0:18:45.13:0,45,1227	0/0:61,0:61:99:0,175,4755	0/0:48,0:48:99:0,138,3723	0/0:37,0:37:99:0,108,2915	0/0:30,10:39:32.77:0,33,781	0/0:32,0:32:90.18:0,90,2254	0/0:35,0:34:82.74:0,83,2134	0/1:13,6:20:99:274,0,786	0/0:22,0:21:60.16:0,60,1515	0/0:20,0:20:51.14:0,51,1328	0/0:114,0:113:99:0,301,8112	0/0:24,0:24:63.21:0,63,1645	0/0:21,0:21:47.92:0,48,1350	0/0:57,0:57:99:0,162,4320	0/0:18,5:23:32.02:0,32,851	0/0:45,0:44:85.24:0,85,3181	0/0:23,0:23:63.19:0,63,1745	0/0:10,0:10:29.45:0,29,697
chr10	4830642	.	CACAG	C	856.53	PASS	AB=0.711;AC=5;AF=0.089;AN=56;BaseQRankSum=8.993;DP=1122;FS=12.733;HRun=0;HaplotypeScore=209.5546;InbreedingCoeff=0.7057;MQ=53.59;MQ0=30;MQRankSum=-6.571;QD=18.22;ReadPosRankSum=-1.508;VQSLOD=2.1536;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:67,0:63:99:0,132,3306	0/0:14,0:14:32.83:0,33,666	0/0:38,0:8:19.78:0,20,378	0/0:45,0:12:18.43:0,18,386	0/0:26,0:26:72.22:0,72,1758	0/0:22,0:22:48.15:0,48,1198	0/0:53,0:51:99:0,144,3534	0/0:53,0:47:99:0,126,3108	0/0:42,0:41:99:0,109,2527	0/0:48,0:46:99:0,132,2993	0/0:20,0:19:51.10:0,51,1120	0/0:59,0:59:99:0,159,3844	0/0:37,0:37:99:0,102,2313	0/0:39,0:39:96.33:0,96,2525	0/0:39,0:39:69.15:0,69,1767	0/0:44,0:44:99:0,117,2776	0/0:51,0:51:99:0,129,2999	0/0:29,0:28:66.14:0,66,1685	0/0:29,0:18:52.42:0,52,1136	0/0:23,0:23:63.20:0,63,1478	0/0:153,0:150:99:0,393,9417	0/0:36,0:35:99:0,99,2254	0/0:24,0:24:63.06:0,63,1459	0/0:65,0:65:99:0,172,4494	0/0:18,0:18:36.12:0,36,963	0/1:19,13:31:49.96:750,0,50	1/1:6,3:8:13.53:158,14,0	1/1:4,2:6:5.60:65,6,0
chr10	4830652	.	CAG	C	531.91	PASS	AB=0.737;AC=5;AF=0.089;AN=56;BaseQRankSum=8.704;DP=1122;FS=15.598;HRun=0;HaplotypeScore=167.6507;InbreedingCoeff=0.6806;MQ=53.20;MQ0=40;MQRankSum=-6.385;QD=13.30;ReadPosRankSum=-2.005;VQSLOD=2.3257;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:66,0:62:99:0,129,2343	0/0:12,0:12:33.11:0,33,563	0/0:44,0:10:22.41:0,22,314	0/0:52,0:12:18.44:0,18,300	0/0:29,0:28:78.18:0,78,1306	0/0:22,0:22:54.13:0,54,865	0/0:59,0:57:99:0,162,2725	0/0:60,0:47:99:0,129,2091	0/0:43,0:42:99:0,105,1732	0/0:44,0:43:99:0,120,2212	0/0:18,0:17:44.74:0,45,629	0/0:55,0:55:99:0,153,2765	0/0:34,0:34:80.18:0,80,1542	0/0:40,0:40:99:0,102,1765	0/0:36,0:35:66.12:0,66,1145	0/0:47,0:47:99:0,117,1948	0/0:47,0:46:99:0,102,2176	0/0:26,0:26:63.13:0,63,1112	0/0:28,0:18:53.04:0,53,732	0/0:23,0:23:63.09:0,63,1097	0/0:153,0:152:99:0,391,6826	0/0:35,0:34:96.29:0,96,1758	0/0:23,0:23:57.15:0,57,982	0/0:69,0:69:99:0,183,3111	0/0:16,0:16:33.10:0,33,592	0/1:18,10:27:29.37:491,0,29	1/1:6,2:7:12.44:134,12,0	1/1:4,0:4:3.81:21,4,0
chr10	4830702	.	G	GAC	954.11	PASS	AB=0.853;AC=4;AF=0.074;AN=54;BaseQRankSum=2.761;DP=1119;FS=2.234;HRun=0;HaplotypeScore=162.6121;InbreedingCoeff=0.3758;MQ=50.35;MQ0=65;MQRankSum=1.972;QD=9.74;ReadPosRankSum=-1.828;VQSLOD=3.4065;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:35,25:51:4.67:937,0,5	0/0:15,0:15:36.12:0,36,458	./.	0/0:17,0:2:5.96:0,6,55	0/0:33,0:32:78.25:0,78,985	0/0:23,0:22:51.16:0,51,645	0/0:62,0:57:99:0,120,1510	0/0:75,0:49:99:0,102,1264	0/0:44,0:41:96.21:0,96,1204	0/0:59,0:49:87.28:0,87,1103	0/0:16,0:14:15.03:0,15,177	0/0:53,0:53:99:0,123,1497	0/0:48,0:47:99:0,106,1396	0/0:40,0:39:87.23:0,87,1064	1/1:22,0:21:3.56:81,4,0	0/0:41,0:41:87.27:0,87,1098	0/0:69,0:67:99:0,148,1901	0/1:16,0:15:34.44:39,0,34	0/0:24,0:14:30.10:0,30,381	0/0:32,0:31:55.88:0,56,809	0/0:150,0:139:99:0,273,3344	0/0:48,0:46:77.35:0,77,1221	0/0:27,0:26:65.27:0,65,832	0/0:64,0:64:99:0,123,1527	0/0:8,0:12:12.03:0,12,132	0/0:39,1:38:42.96:0,43,1051	0/0:14,0:14:32.38:0,32,394	0/0:4,0:3:5.99:0,6,76
chr10	4830776	.	T	TACACAC	1425.25	PASS	AB=0.981;AC=12;AF=0.214;AN=56;BaseQRankSum=2.418;DP=738;FS=3.287;HRun=0;HaplotypeScore=151.3899;InbreedingCoeff=0.5054;MQ=50.46;MQ0=31;MQRankSum=-4.978;QD=6.31;ReadPosRankSum=-5.009;VQSLOD=0.7633;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:27:3:25,3,0	0/0:6,0:6:12.03:0,12,217	0/0:55,0:14:4.15:0,4,96	0/1:42,0:15:30.50:30,0,41	0/0:26,0:25:33.11:0,33,655	0/0:16,0:16:30.10:0,30,590	0/0:30,0:28:49.72:0,50,976	0/1:38,0:28:3.02:89,0,3	0/1:26,0:26:1.74:2,0,692	0/0:25,0:24:21.04:0,21,395	0/0:10,0:10:15.04:0,15,265	0/0:19,0:20:30.06:0,30,596	0/0:24,0:24:14.06:0,14,338	0/0:23,0:23:27.09:0,27,561	1/1:21,0:21:18.01:245,18,0	0/0:17,0:17:12.03:0,12,216	0/1:36,0:37:72.30:72,0,77	1/1:11,8:19:35.15:997,35,0	0/0:22,0:13:14.82:0,15,190	0/0:12,0:12:18.02:0,18,302	0/0:78,0:78:89.86:0,90,1749	0/0:23,0:23:2.11:0,2,487	0/0:18,0:18:14.98:0,15,334	0/0:35,0:35:35.27:0,35,686	1/1:13,0:13:6.02:121,6,0	0/0:37,0:36:81.27:0,81,1494	0/0:19,0:19:40.86:0,41,766	0/0:16,0:16:30.04:0,30,457
chr10	4830794	.	CGG	C	1473.30	PASS	AB=0.964;AC=7;AF=0.125;AN=56;BaseQRankSum=3.158;DP=757;FS=8.826;HRun=10;HaplotypeScore=101.4321;InbreedingCoeff=0.8781;MQ=60.45;MQ0=8;MQRankSum=2.085;QD=14.73;ReadPosRankSum=6.723;VQSLOD=1.1098;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:25:38.11:0,38,419	0/0:7,0:7:15.04:0,15,215	0/0:40,0:17:23.88:0,24,356	0/1:26,0:13:3.08:3,0,193	0/0:18,0:20:23.53:0,24,276	0/0:18,0:20:35.96:0,36,450	0/0:34,0:34:75.17:0,75,1006	0/0:18,0:19:24.54:0,25,306	0/0:25,0:26:49.42:0,49,652	0/0:30,0:30:52.34:0,52,673	0/0:15,0:15:27.06:0,27,360	0/0:37,0:41:83.68:0,84,1162	0/0:21,0:24:39.94:0,40,470	0/0:34,0:34:76.08:0,76,1109	0/0:26,0:26:65.25:0,65,958	0/0:22,0:23:56.63:0,57,804	0/0:29,0:29:46.62:0,47,606	0/0:23,0:25:65.84:0,66,794	0/0:19,0:16:29.55:0,30,381	0/0:17,0:19:29.56:0,30,381	0/0:77,0:78:99:0,117,1643	0/0:24,0:24:42.58:0,43,584	0/0:20,0:20:42.60:0,43,632	0/0:33,0:33:63.18:0,63,933	0/0:23,0:23:46.36:0,46,575	1/1:21,18:38:90.20:988,90,0	1/1:4,13:17:30.07:334,30,0	1/1:2,15:17:27.06:293,27,0
chr10	4832491	.	TG	T	672.87	PASS	AB=0.921;AC=7;AF=0.125;AN=56;BaseQRankSum=3.501;DP=432;FS=13.429;HRun=10;HaplotypeScore=58.5251;InbreedingCoeff=0.1331;MQ=73.55;MQ0=0;MQRankSum=-1.601;QD=5.61;ReadPosRankSum=3.723;VQSLOD=0.2651;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:9,31:40:83.97:728,84,0	0/0:1,0:1:2.97:0,3,20	0/0:12,0:12:28.70:0,29,296	0/0:17,0:14:23.06:0,23,214	0/0:7,0:7:9:0,9,83	0/0:21,1:22:16.15:0,16,394	0/0:20,1:21:13.04:0,13,347	0/1:14,1:15:8.01:8,0,148	0/0:13,1:14:9.96:0,10,296	0/0:14,0:14:15.03:0,15,158	0/1:7,2:9:31.05:31,0,144	0/0:19,2:22:19.06:0,19,393	0/1:15,2:17:22:22,0,234	0/0:14,1:15:5.23:0,5,268	0/0:8,0:19:5.83:0,6,38	0/1:10,0:18:0.44:0,0,37	0/0:25,1:26:28.04:0,28,503	0/0:9,0:19:19.06:0,19,158	0/0:5,0:5:9:0,9,87	0/0:4,0:4:5.96:0,6,44	0/0:20,1:21:13.03:0,13,356	0/0:13,0:13:27.05:0,27,282	0/0:4,0:4:9.01:0,9,91	0/1:20,1:21:3.94:4,0,399	0/0:10,0:10:10.37:0,10,94	0/0:22,0:22:42.10:0,42,455	0/0:20,1:21:36.07:0,36,380	0/0:3,0:3:9.02:0,9,100
chr10	4833001	.	GC	G	2347.91	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.842;DP=663;FS=10.456;HRun=3;HaplotypeScore=62.6735;InbreedingCoeff=0.9888;MQ=79.95;MQ0=0;MQRankSum=-1.175;QD=30.49;ReadPosRankSum=4.218;VQSLOD=2.9894;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,126,1791	0/0:4,0:4:12.04:0,12,173	0/0:16,0:16:38.99:0,39,561	0/0:20,0:20:28.82:0,29,486	0/0:24,0:24:69.23:0,69,994	0/0:15,0:15:42.13:0,42,586	0/0:38,0:38:99:0,108,1555	0/0:13,0:13:39.12:0,39,544	0/0:22,0:22:66.19:0,66,914	0/0:20,0:20:57.19:0,57,820	0/0:22,0:22:60.19:0,60,846	0/0:32,0:32:96.30:0,96,1338	0/0:31,0:31:90.30:0,90,1293	0/0:14,0:14:39.13:0,39,562	1/1:1,24:25:66.21:818,66,0	0/0:23,0:23:69.22:0,69,966	0/0:41,0:41:99:0,123,1731	1/1:0,34:34:96.30:1190,96,0	0/0:17,0:17:51.17:0,51,731	0/0:20,0:20:51.11:0,51,676	0/0:49,0:49:99:0,138,1926	0/0:18,0:18:54.18:0,54,772	0/0:21,0:21:63.21:0,63,907	0/0:19,0:19:54.18:0,54,778	1/1:0,18:18:39.12:483,39,0	0/0:26,0:26:78.26:0,78,1121	0/0:20,0:20:57.19:0,57,820	0/0:17,0:17:48.16:0,48,691
chr10	4836110	.	CCTT	C	2422.74	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=7.579;DP=641;FS=1.847;HRun=0;HaplotypeScore=96.6011;InbreedingCoeff=0.9970;MQ=71.73;MQ0=0;MQRankSum=-3.472;QD=45.71;ReadPosRankSum=1.853;VQSLOD=5.2956;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,126,3053	0/0:12,0:12:36.09:0,36,762	0/0:12,0:11:21.11:0,21,668	0/0:13,0:13:21.11:0,21,700	0/0:29,0:29:87.27:0,87,2019	0/0:20,0:20:60.21:0,60,1473	0/0:33,0:33:99:0,99,2315	0/0:36,0:36:99:0,102,2328	0/0:16,0:16:48.16:0,48,1107	0/0:44,0:44:99:0,129,3181	0/0:17,0:17:51.15:0,51,1163	0/0:26,0:26:78.27:0,78,1810	0/0:25,0:25:75.25:0,75,1752	0/0:20,0:20:60.21:0,60,1387	0/0:27,0:27:81.26:0,81,1926	0/0:23,0:23:69.24:0,69,1635	0/0:37,0:37:99:0,111,2662	0/0:16,0:16:48.16:0,48,1183	0/0:11,0:11:33.10:0,33,724	0/0:18,0:18:51.18:0,51,1255	0/0:21,0:21:60.21:0,60,1429	0/0:22,0:22:66.23:0,66,1598	0/0:23,0:23:69.21:0,69,1563	0/0:21,0:21:60.68:0,61,1453	0/0:19,0:19:57.20:0,57,1361	1/1:0,13:13:39.13:722,39,0	1/1:0,22:22:57.20:1061,57,0	1/1:0,18:18:42.14:782,42,0
chr10	4836124	.	CT	C	649.49	PASS	AB=0.880;AC=3;AF=0.054;AN=56;BaseQRankSum=6.280;DP=669;FS=4.180;HRun=12;HaplotypeScore=84.7492;InbreedingCoeff=0.5723;MQ=67.60;MQ0=0;MQRankSum=-0.495;QD=9.41;ReadPosRankSum=2.810;VQSLOD=3.2407;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:9,38:47:71.34:736,71,0	0/0:9,0:9:15.03:0,15,152	0/0:9,0:7:8.97:0,9,80	0/0:14,0:14:20.31:0,20,212	0/0:26,0:27:66.85:0,67,650	0/0:20,0:23:59.78:0,60,571	0/0:30,1:31:51.89:0,52,700	0/0:28,0:29:38.98:0,39,369	0/0:16,1:17:21.83:0,22,391	0/0:38,1:42:51.99:0,52,657	0/0:19,0:21:50.76:0,51,480	0/0:25,1:28:36.61:0,37,504	0/0:22,0:22:48.09:0,48,481	0/0:21,0:21:51.06:0,51,494	0/0:27,1:29:42.73:0,43,600	0/0:20,1:24:36.48:0,36,507	0/0:31,2:34:63.73:0,64,799	0/0:18,1:19:18.80:0,19,352	0/0:12,0:14:32.73:0,33,298	0/0:23,1:25:27.83:0,28,453	0/0:19,3:22:27.86:0,28,464	0/0:23,0:24:47.76:0,48,449	0/1:18,3:22:18.81:19,0,349	0/0:29,2:32:48.76:0,49,651	0/0:16,0:17:41.91:0,42,404	0/0:17,1:19:24.82:0,25,423	0/0:23,3:27:6.82:0,7,448	0/0:19,1:21:21.78:0,22,378
chr10	4836393	.	TA	T	872.62	PASS	AB=0.893;AC=3;AF=0.054;AN=56;BaseQRankSum=7.376;DP=665;FS=1.872;HRun=10;HaplotypeScore=67.6288;InbreedingCoeff=0.5653;MQ=73.77;MQ0=0;MQRankSum=-1.890;QD=12.47;ReadPosRankSum=1.512;VQSLOD=3.5148;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,38:45:99:965,111,0	0/0:10,1:11:1.02:0,1,239	0/0:29,1:26:14.49:0,14,392	0/0:23,0:17:29.04:0,29,265	0/0:30,0:30:75.18:0,75,813	0/0:22,0:22:49.57:0,50,561	0/0:17,0:17:48.12:0,48,523	0/0:30,0:30:74.30:0,74,796	0/0:28,0:28:75.19:0,75,815	0/0:24,0:24:63.17:0,63,697	0/0:15,0:16:38.94:0,39,412	0/0:33,0:32:87.18:0,87,948	0/0:22,0:22:60.15:0,60,651	0/0:25,0:25:63.12:0,63,676	0/0:30,1:31:61.18:0,61,903	0/0:26,0:27:62.49:0,62,654	0/1:22,3:25:8.98:9,0,592	0/0:17,0:17:36.10:0,36,398	0/0:16,0:16:42.10:0,42,451	0/0:17,1:18:23.32:0,23,473	0/0:23,0:23:66.15:0,66,713	0/0:15,1:17:19.77:0,20,412	0/0:31,1:31:64.15:0,64,912	0/0:14,0:14:39.10:0,39,424	0/0:15,0:16:44.94:0,45,471	0/0:27,1:28:46.13:0,46,723	0/0:27,0:30:80.72:0,81,839	0/0:12,0:14:36.82:0,37,381
chr10	4836882	.	CG	C	1003.74	PASS	AC=14;AF=0.269;AN=52;BaseQRankSum=3.578;DP=386;FS=22.211;HRun=3;HaplotypeScore=30.9747;InbreedingCoeff=0.8852;MQ=37.03;MQ0=81;MQRankSum=-3.322;QD=8.96;ReadPosRankSum=1.030;VQSLOD=-0.4742;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:11,10:16:14.69:287,15,0	0/0:8,0:7:20.85:0,21,206	./.	./.	0/0:12,0:9:17.93:0,18,197	0/0:15,0:10:18.04:0,18,238	0/0:18,0:14:23.77:0,24,243	1/1:10,10:13:27.05:312,27,0	0/0:12,0:11:18.02:0,18,203	0/0:16,0:12:32.89:0,33,326	0/0:5,0:4:9:0,9,107	0/0:12,0:11:30.05:0,30,358	0/0:10,0:8:18.02:0,18,203	0/0:5,0:7:8.87:0,9,65	1/1:6,5:11:20.93:189,21,0	1/1:3,5:5:3.01:37,3,0	1/1:14,7:10:15.05:183,15,0	1/1:10,10:11:9.02:100,9,0	0/0:16,0:13:35.82:0,36,495	0/0:12,0:8:17.95:0,18,210	0/0:12,0:8:20.85:0,21,173	0/0:15,0:12:18.05:0,18,240	0/0:7,0:6:12.03:0,12,149	0/0:16,0:11:21.04:0,21,248	1/1:1,9:9:6.02:73,6,0	0/0:16,0:12:30.09:0,30,397	0/0:12,0:10:24:0,24,279	0/0:21,0:13:15.48:0,15,192
chr10	4843217	.	A	AT	1313.57	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-5.890;DP=626;FS=0.641;HRun=3;HaplotypeScore=64.9006;InbreedingCoeff=0.9427;MQ=81.24;MQ0=0;MQRankSum=0.737;QD=36.49;ReadPosRankSum=-5.437;VQSLOD=1.6450;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:90.29:0,90,1168	0/0:4,0:4:9.03:0,9,116	0/0:19,0:19:41.29:0,41,552	0/0:32,0:32:54.86:0,55,923	0/0:12,0:12:33.11:0,33,423	0/0:22,0:22:54.18:0,54,700	0/0:30,0:30:81.26:0,81,1051	1/1:2,34:36:96.31:1408,96,0	0/0:19,0:19:54.18:0,54,701	0/0:12,0:12:33.11:0,33,427	0/0:14,0:14:42.14:0,42,544	0/0:27,0:27:72.23:0,72,934	0/0:23,0:23:69.22:0,69,890	0/0:24,0:24:72.23:0,72,930	0/0:31,0:31:93.30:0,93,1204	0/0:38,0:38:99:0,108,1389	0/0:34,0:34:96.29:0,96,1228	0/0:22,0:22:63.20:0,63,818	0/0:25,0:24:69.22:0,69,895	0/0:10,0:10:24.08:0,24,308	0/0:37,0:37:99:0,111,1421	0/0:16,0:16:36.10:0,36,445	0/0:14,0:14:39.12:0,39,491	0/0:18,0:18:54.18:0,54,701	0/0:18,0:18:51.17:0,51,661	0/0:22,0:22:66.21:0,66,842	0/0:23,0:23:69.22:0,69,886	0/0:14,0:14:42.14:0,42,544
chr10	4844579	.	T	TG	675.34	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=3.223;DP=617;FS=0.775;HRun=6;HaplotypeScore=97.3152;InbreedingCoeff=0.6437;MQ=70.80;MQ0=0;MQRankSum=2.601;QD=12.28;ReadPosRankSum=-0.896;VQSLOD=2.3632;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,33:39:63.63:768,64,0	0/0:5,0:5:12.03:0,12,122	0/0:14,0:14:35.86:0,36,329	0/0:13,0:14:27.02:0,27,264	0/0:9,0:9:18.03:0,18,183	0/0:14,0:15:33.07:0,33,336	0/0:38,0:38:93.16:0,93,932	0/0:23,0:23:50.80:0,51,356	0/0:21,0:21:54.12:0,54,551	0/0:25,0:25:66.12:0,66,657	0/0:13,0:13:27.06:0,27,275	0/0:26,0:26:69.13:0,69,697	0/0:19,0:19:54.12:0,54,551	0/0:18,0:18:42.08:0,42,428	0/0:23,0:23:52.64:0,53,328	0/1:16,0:16:9.11:9,0,212	0/0:42,0:42:68.11:0,68,532	0/0:28,0:28:70.18:0,70,446	0/0:19,0:19:45.10:0,45,458	0/0:10,0:10:24.05:0,24,245	0/0:69,0:70:99:0,161,1676	0/0:22,0:22:54.12:0,54,551	0/0:11,0:11:21.04:0,21,214	0/0:36,0:36:81.10:0,81,804	0/0:15,0:15:29.55:0,30,209	0/0:18,0:18:43.91:0,44,265	0/0:22,0:22:27.50:0,27,310	0/0:6,0:6:14.77:0,15,94
chr10	4845190	.	CGTGTCT	C	290.16	PASS	AB=0.994;AC=7;AF=0.125;AN=56;BaseQRankSum=8.918;DP=645;FS=5.413;HRun=0;HaplotypeScore=129.1090;InbreedingCoeff=0.1160;MQ=73.77;MQ0=8;MQRankSum=-6.873;QD=1.66;ReadPosRankSum=-0.848;VQSLOD=2.2341;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:3,33:36:6:93,6,0	0/0:10,0:10:26.92:0,27,235	0/0:36,0:24:43.17:0,43,460	0/0:46,0:31:40.23:0,40,505	0/0:14,0:14:30.01:0,30,455	0/0:15,0:15:44.53:0,45,798	0/0:26,0:26:74.96:0,75,1300	0/0:30,0:30:77.32:0,77,674	0/0:21,0:21:59.33:0,59,1121	0/0:21,0:21:54.10:0,54,826	0/0:11,0:11:27.03:0,27,598	0/0:25,0:25:56.06:0,56,797	0/0:14,0:14:41.90:0,42,582	0/0:28,0:27:70.28:0,70,784	0/1:26,0:26:23.12:23,0,290	0/1:24,0:24:99:125,0,240	0/1:29,1:30:87.43:87,0,318	0/1:35,0:35:26.38:26,0,469	0/0:21,0:21:29.20:0,29,481	0/0:8,0:8:17.80:0,18,289	0/0:42,0:42:99:0,108,1700	0/0:19,0:18:44.96:0,45,544	0/0:17,0:17:50.87:0,51,698	0/0:23,0:23:53.66:0,54,1184	0/0:17,0:17:6.23:0,6,211	0/0:21,0:21:56.93:0,57,501	0/1:24,0:24:64.73:65,0,348	0/0:5,0:5:14.89:0,15,112
chr10	4845195	.	CTGTGTGTG	C	1469.37	PASS	AB=0.913;AC=13;AF=0.241;AN=54;BaseQRankSum=8.057;DP=683;FS=4.689;HRun=0;HaplotypeScore=153.3593;InbreedingCoeff=0.4401;MQ=66.81;MQ0=13;MQRankSum=-6.971;QD=5.95;ReadPosRankSum=1.401;VQSLOD=2.4961;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:35,0:35:2.40:2,0,41	0/0:12,0:12:6.02:0,6,132	./.	0/0:43,0:28:6.02:0,6,115	0/0:15,0:19:18.06:0,18,564	0/0:18,0:20:33.58:0,34,1061	0/0:26,0:26:39.12:0,39,1364	0/1:29,0:27:0:0,0,0	0/0:20,0:22:30.10:0,30,1085	0/0:28,0:28:42.84:0,43,909	0/0:12,0:12:18.06:0,18,646	0/0:23,0:23:36.54:0,37,844	0/0:16,0:16:21.07:0,21,624	0/0:29,0:28:20.86:0,21,601	1/1:15,9:26:15.43:280,15,0	1/1:15,8:25:21.07:506,21,0	1/1:22,2:29:12.53:186,13,0	0/1:28,4:34:58.27:440,0,58	0/1:21,0:22:52.98:53,0,479	0/0:14,0:14:21.07:0,21,589	0/0:52,0:51:66.21:0,66,2003	0/0:20,0:19:15.05:0,15,530	0/0:19,0:19:14.95:0,15,489	0/0:24,0:25:39.13:0,39,1409	0/1:13,5:19:65.57:131,0,66	0/0:19,0:19:3.01:0,3,37	1/1:22,0:28:2.03:26,2,0	0/0:7,0:5:3.01:0,3,38
chr10	4845438	.	T	TGCTAAGAA	5333.59	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-0.056;DP=759;FS=1.261;HRun=0;HaplotypeScore=185.3720;InbreedingCoeff=0.9956;MQ=85.89;MQ0=0;MQRankSum=-10.575;QD=106.67;ReadPosRankSum=0.210;VQSLOD=5.1384;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,38:50:99:5334,123,0	0/0:9,0:9:27.09:0,27,818	0/0:19,0:19:54.19:0,54,1481	0/0:33,0:33:90.30:0,90,2313	0/0:11,0:11:33.11:0,33,981	0/0:24,0:24:72.20:0,72,1945	0/0:34,0:34:99:0,102,2921	0/0:31,0:31:93.32:0,93,2691	0/0:37,0:37:99:0,111,3236	0/0:24,0:24:69.24:0,69,1985	0/0:8,0:8:24.08:0,24,644	0/0:46,0:46:99:0,135,3885	0/0:25,0:25:75.23:0,75,2143	0/0:27,0:27:81.28:0,81,2449	0/0:52,0:52:99:0,157,4636	0/0:26,0:26:78.26:0,78,2295	0/0:35,0:35:96.33:0,96,2736	0/0:25,0:25:69.19:0,69,1912	0/0:19,0:19:57.20:0,57,1627	0/0:13,0:13:39.12:0,39,1073	0/0:46,0:46:99:0,138,4008	0/0:19,0:19:54.19:0,54,1631	0/0:15,0:15:45.15:0,45,1294	0/0:47,0:47:99:0,141,4184	0/0:20,0:20:60.21:0,60,1680	0/0:28,0:28:81.27:0,81,2389	0/0:27,0:27:75.26:0,75,2269	0/0:9,0:9:27.09:0,27,812
chr10	4846441	.	C	CA	1047.56	PASS	AB=0.795;AC=11;AF=0.196;AN=56;BaseQRankSum=9.480;DP=478;FS=66.360;HRun=0;HaplotypeScore=115.5922;InbreedingCoeff=-0.2507;MQ=76.62;MQ0=0;MQRankSum=-8.390;QD=6.31;ReadPosRankSum=2.057;VQSLOD=0.9954;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:69.19:0,69,935	0/1:7,1:8:22.25:22,0,268	0/0:18,0:18:51.15:0,51,673	0/0:14,0:14:42.13:0,42,567	0/0:21,1:22:27:0,27,317	0/0:20,0:20:36.19:0,36,615	0/0:23,0:23:66.18:0,66,897	0/0:25,0:25:72.23:0,72,991	0/0:16,0:16:48.16:0,48,670	0/1:14,9:23:99:391,0,381	0/1:9,4:13:77.83:78,0,258	0/0:18,0:18:54.14:0,54,732	0/0:15,0:15:45.11:0,45,602	0/0:23,1:24:12.92:0,13,675	0/0:15,0:15:39.09:0,39,522	0/0:19,0:19:54.04:0,54,655	0/1:20,2:22:31.16:31,0,606	0/0:23,0:23:66.15:0,66,880	0/0:14,0:14:39.13:0,39,541	0/1:11,7:18:99:194,0,270	0/0:12,0:12:33.11:0,33,459	0/1:15,5:20:99:174,0,387	0/1:7,3:10:66.72:67,0,150	0/0:10,0:10:4.02:0,4,230	0/1:9,3:12:74.35:74,0,267	0/1:16,3:19:76.72:77,0,563	0/1:16,2:18:9.52:10,0,516	0/1:1,2:3:32.83:77,0,33
chr10	4847649	.	ATCTCTCTCTCTCTCTCTC	A	1546.93	PASS	AB=0.867;AC=12;AF=0.231;AN=52;BaseQRankSum=6.236;DP=565;FS=0.000;HRun=0;HaplotypeScore=246.4022;InbreedingCoeff=0.5740;MQ=65.87;MQ0=21;MQRankSum=-4.697;QD=16.46;ReadPosRankSum=1.275;VQSLOD=1.9896;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:10,0:10:15.05:0,15,853	0/0:21,0:15:6.89:0,7,105	0/0:34,0:19:9.03:0,9,157	0/0:28,0:29:45.12:0,45,2455	0/0:19,0:19:36.07:0,36,2054	0/0:21,0:20:36.11:0,36,2195	0/0:28,0:25:27.08:0,27,547	0/0:15,0:17:27.09:0,27,1538	0/0:24,0:24:45.15:0,45,3163	0/0:19,0:18:17.57:0,18,1179	0/0:29,0:27:39.13:0,39,2516	0/0:16,0:16:24.08:0,24,1616	0/0:22,0:22:24.08:0,24,1775	./.	1/1:10,2:12:3.01:115,3,0	1/1:3,0:8:3.01:124,3,0	0/1:7,4:11:45.98:128,0,46	0/0:20,0:17:24.08:0,24,1157	0/0:19,0:20:33.11:0,33,1615	0/0:20,0:20:30.04:0,30,1659	0/0:17,0:17:21.07:0,21,1609	0/0:21,0:21:30.10:0,30,1851	0/0:30,0:30:54.12:0,54,3754	1/1:9,0:12:2.99:23,3,0	0/1:15,0:14:34.87:243,0,35	1/1:21,0:21:20.55:935,21,0	1/1:13,0:10:3.01:126,3,0
chr10	4847673	.	CTCTCTCTCTCTCTCTCTCTCTGTGTG	C	2108.87	PASS	AB=0.871;AC=13;AF=0.232;AN=56;BaseQRankSum=8.028;DP=505;FS=0.828;HRun=0;HaplotypeScore=277.4776;InbreedingCoeff=0.4676;MQ=52.59;MQ0=30;MQRankSum=-4.104;QD=21.97;ReadPosRankSum=-0.056;VQSLOD=1.8799;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:37:8.29:0,8,268	0/0:8,0:8:21.07:0,21,1467	0/0:6,0:5:8.73:0,9,183	0/0:16,0:7:9.03:0,9,170	0/0:31,0:30:60.21:0,60,4275	0/0:17,0:17:39.98:0,40,2873	0/0:26,0:24:60.11:0,60,3488	0/0:24,0:21:63.14:0,63,1574	0/0:17,0:14:33.11:0,33,2754	0/0:24,0:24:69.24:0,69,5392	0/0:17,0:15:23.44:0,23,1649	0/0:28,0:25:57.20:0,57,4343	0/0:15,0:15:30.10:0,30,2602	0/0:13,0:13:29.71:0,30,2641	1/1:10,0:10:0.82:2,1,0	0/1:13,0:12:2.01:2,0,338	1/1:9,0:7:3.01:150,3,0	0/1:10,0:10:38.76:39,0,640	0/0:20,0:18:54.17:0,54,3597	0/0:24,0:20:51.16:0,51,3316	0/0:17,0:17:39.13:0,39,2816	0/0:14,0:13:27.08:0,27,2066	0/0:15,0:15:36.12:0,36,2726	0/0:37,0:37:84.29:0,84,6431	1/1:5,0:5:0.88:34,1,0	0/1:7,11:18:35.31:728,0,35	1/1:21,0:21:2.92:1039,3,0	1/1:7,2:4:6.02:250,6,0
chr10	4847675	.	CTCTCTCTCTCTCTCTCTCTGTGTG	C	2231.22	PASS	AB=1.000;AC=12;AF=0.214;AN=56;BaseQRankSum=7.710;DP=510;FS=0.000;HRun=0;HaplotypeScore=261.2617;InbreedingCoeff=0.4014;MQ=51.18;MQ0=32;MQRankSum=-3.836;QD=22.09;ReadPosRankSum=0.290;VQSLOD=2.1946;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:36:8.47:0,8,223	0/0:10,0:10:27.09:0,27,1439	0/0:4,0:3:6.89:0,7,105	0/0:15,0:5:6.02:0,6,123	0/0:31,0:30:60.17:0,60,3838	0/0:19,0:19:45.98:0,46,2678	0/0:23,0:21:51.16:0,51,3035	0/0:26,0:23:66.03:0,66,1267	0/0:18,0:15:36.12:0,36,2538	0/0:25,0:25:72.25:0,72,4955	0/0:18,0:16:20.44:0,20,1461	0/0:26,0:23:57.20:0,57,3901	0/0:14,0:14:30.10:0,30,2350	0/0:12,0:12:26.95:0,27,2389	1/1:12,0:10:0.15:1,0,0	0/1:14,0:13:10.84:11,0,302	0/1:12,0:10:29.57:107,0,30	0/1:12,0:12:35.84:36,0,656	0/0:21,0:19:51.18:0,51,3201	0/0:25,0:20:48.16:0,48,2954	0/0:16,0:16:39.07:0,39,2502	0/0:13,0:12:24.08:0,24,1883	0/0:14,0:14:36.12:0,36,2449	0/0:40,0:40:93.32:0,93,5965	1/1:5,0:5:1.12:20,1,0	0/1:15,0:14:7.92:641,0,8	1/1:1,21:22:20.08:1344,20,0	1/1:9,0:4:6.02:216,6,0
chr10	4847705	.	G	GTA	784.89	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=4.256;DP=564;FS=0.000;HRun=0;HaplotypeScore=139.5246;InbreedingCoeff=0.6741;MQ=47.88;MQ0=29;MQRankSum=-5.503;QD=21.80;ReadPosRankSum=-2.777;VQSLOD=3.3865;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:27.47:0,27,356	0/0:11,0:11:27.05:0,27,335	0/0:17,0:9:19.58:0,20,194	0/0:20,0:7:17.95:0,18,173	0/0:29,0:28:42.97:0,43,529	0/0:21,0:21:48.02:0,48,559	0/0:21,0:19:45.06:0,45,568	1/1:5,27:30:89.70:879,90,0	0/0:25,0:22:51.06:0,51,650	0/0:30,0:30:88.94:0,89,1098	0/0:19,0:18:24.91:0,25,298	0/0:27,0:23:51.51:0,52,586	0/0:12,0:12:33.05:0,33,414	0/0:13,0:13:29.94:0,30,422	0/0:18,0:16:5.18:0,5,63	0/0:23,0:22:9.31:0,9,53	0/0:17,0:15:15.24:0,15,99	0/0:22,0:22:17.31:0,17,126	0/0:22,0:20:57:0,57,725	0/0:21,0:17:45.05:0,45,532	0/0:23,0:23:56.98:0,57,633	0/0:11,0:10:16.38:0,16,168	0/0:13,0:13:33.01:0,33,405	0/0:42,0:42:92.63:0,93,1137	0/1:4,0:4:0:0,0,0	0/0:16,0:16:28.38:0,28,264	0/0:22,0:22:6.47:0,6,141	0/0:5,0:3:6.01:0,6,57
chr10	4847754	.	A	AG	376.34	PASS	AB=0.702;AC=2;AF=0.036;AN=56;BaseQRankSum=6.535;DP=620;FS=2.508;HRun=1;HaplotypeScore=123.0511;InbreedingCoeff=-0.0269;MQ=64.35;MQ0=2;MQRankSum=-2.089;QD=7.84;ReadPosRankSum=0.277;VQSLOD=0.8489;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:13,16:28:19.67:366,0,20	0/0:12,0:12:33.11:0,33,459	0/0:30,0:22:47.18:0,47,541	0/0:44,0:28:18.89:0,19,606	0/0:21,0:21:51.04:0,51,659	0/0:20,0:20:60.17:0,60,797	0/0:22,0:22:63.21:0,63,870	0/1:13,6:19:80.55:100,0,81	0/0:22,0:22:66.13:0,66,869	0/0:21,0:21:63.20:0,63,860	0/0:18,0:18:39.04:0,39,521	0/0:28,0:28:78.13:0,78,1010	0/0:14,0:14:42.10:0,42,539	0/0:15,0:15:41.85:0,42,584	0/0:16,0:16:25.68:0,26,195	0/0:23,0:23:39.06:0,39,296	0/0:16,0:17:41.39:0,41,278	0/0:20,0:20:53.22:0,53,353	0/0:31,0:31:93.30:0,93,1270	0/0:18,0:18:28.13:0,28,585	0/0:32,0:32:90.11:0,90,1226	0/0:10,0:10:20.98:0,21,291	0/0:13,0:13:38.67:0,39,489	0/0:52,0:52:99:0,146,1937	0/0:17,0:17:41.05:0,41,272	0/0:17,0:17:43.27:0,43,285	0/0:18,0:18:29.31:0,29,182	0/0:18,0:18:47.86:0,48,298
chr10	4847755	.	A	AG	372.77	PASS	AB=0.822;AC=3;AF=0.054;AN=56;BaseQRankSum=5.172;DP=631;FS=2.296;HRun=0;HaplotypeScore=124.6994;InbreedingCoeff=0.0342;MQ=64.15;MQ0=2;MQRankSum=-0.791;QD=5.04;ReadPosRankSum=-0.989;VQSLOD=3.4234;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:14,16:29:8.67:324,0,9	0/0:12,0:12:33.11:0,33,454	0/0:30,0:22:29.21:0,29,478	0/0:44,0:27:24.91:0,25,600	0/0:21,0:21:54.01:0,54,673	0/0:20,0:20:60.19:0,60,809	0/0:22,0:22:63.21:0,63,879	0/1:20,6:24:30.43:136,0,30	0/0:23,0:23:66.05:0,66,881	0/0:21,0:21:63.20:0,63,848	0/0:18,0:18:39.05:0,39,510	0/0:29,0:29:78.17:0,78,1018	0/0:15,0:15:42.11:0,42,538	0/0:15,0:15:41.98:0,42,585	0/0:17,0:17:38.99:0,39,214	0/0:23,0:23:50.41:0,50,281	0/0:17,0:17:20.76:0,21,202	0/0:20,0:20:52.35:0,52,306	0/0:31,0:31:93.28:0,93,1247	0/0:19,0:19:48.03:0,48,610	0/0:32,0:32:90.27:0,90,1216	0/0:9,0:9:21.07:0,21,289	0/0:13,0:13:37.85:0,38,483	0/0:52,0:52:99:0,147,1944	0/0:17,0:17:17.33:0,17,211	0/0:18,0:17:43.84:0,44,248	0/0:18,0:18:28.63:0,29,153	0/1:18,0:18:4.01:4,0,175
chr10	4850576	.	TTTTG	T	3688.62	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=11.301;DP=624;FS=2.746;HRun=0;HaplotypeScore=102.3253;InbreedingCoeff=0.9960;MQ=73.83;MQ0=0;MQRankSum=-0.665;QD=29.75;ReadPosRankSum=3.180;VQSLOD=3.7757;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,111,2539	0/0:11,0:11:33.11:0,33,795	0/0:26,0:23:23.82:0,24,467	0/0:20,0:19:30.10:0,30,615	0/0:25,0:25:57.18:0,57,1316	0/0:17,0:17:42.14:0,42,1021	0/0:30,0:30:54.19:0,54,1257	0/0:22,0:22:36.12:0,36,767	0/0:29,0:29:72.21:0,72,1529	0/0:15,0:15:39.10:0,39,792	0/0:19,0:19:42.11:0,42,879	0/0:32,0:32:72.22:0,72,1613	0/0:27,0:27:69.19:0,69,1610	0/0:15,0:15:24.08:0,24,569	1/1:3,16:19:42.14:686,42,0	0/0:18,0:18:42.14:0,42,999	0/0:39,0:39:99:0,105,2450	1/1:9,22:31:29.14:746,29,0	0/0:21,0:21:27.05:0,27,427	0/0:16,0:16:42.14:0,42,1018	0/0:20,0:20:45.14:0,45,1018	0/0:9,0:9:18.05:0,18,390	0/0:10,0:10:24.08:0,24,555	0/0:38,0:38:93.24:0,93,2023	1/1:5,17:22:48.16:784,48,0	1/1:6,12:18:39.11:590,39,0	1/1:3,13:16:23.69:392,24,0	1/1:6,12:18:30.10:490,30,0
chr10	4860691	.	CCAGAAAGCAGGGGGG	C	2410.88	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.034;DP=679;FS=1.899;HRun=0;HaplotypeScore=271.3073;InbreedingCoeff=0.9840;MQ=84.30;MQ0=0;MQRankSum=-7.011;QD=60.27;ReadPosRankSum=0.271;VQSLOD=3.2539;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,35:40:57.20:2506,57,0	0/0:14,0:14:33.11:0,33,2084	0/0:23,0:23:66.23:0,66,3169	0/0:25,0:25:57.20:0,57,2770	0/0:15,0:15:38.83:0,39,2188	0/0:27,0:27:78.25:0,78,5112	0/0:30,0:30:81.28:0,81,5417	0/0:20,0:20:57.20:0,57,3515	0/0:21,0:21:63.20:0,63,4003	0/0:24,0:24:72.23:0,72,4504	0/0:15,0:15:39.13:0,39,2464	0/0:35,0:35:99:0,99,6464	0/0:20,0:20:60.19:0,60,4034	0/0:23,0:23:63.22:0,63,4134	0/0:28,0:28:81.28:0,81,5212	0/0:33,0:33:96.33:0,96,6660	0/0:38,0:38:99:0,111,7208	0/0:35,0:35:96.33:0,96,6473	0/0:14,0:14:42.14:0,42,2536	0/0:13,0:13:39.13:0,39,2818	0/0:41,0:41:99:0,123,8879	0/0:21,0:21:60.21:0,60,4088	0/0:13,0:13:39.13:0,39,2454	0/0:36,0:36:99:0,102,6406	0/0:23,0:22:66.23:0,66,4664	0/0:19,0:19:48.16:0,48,3528	0/0:28,0:28:84.29:0,84,5433	0/0:5,0:5:15.05:0,15,1120
chr10	4863886	.	T	TAA	599.44	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.171;DP=547;FS=7.210;HRun=0;HaplotypeScore=115.8638;InbreedingCoeff=0.8015;MQ=65.11;MQ0=2;MQRankSum=-4.689;QD=24.98;ReadPosRankSum=0.168;VQSLOD=4.5766;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,15:24:47.53:694,48,0	0/0:7,0:7:21.07:0,21,340	0/0:19,0:13:39.04:0,39,506	0/0:15,0:10:17.89:0,18,343	0/0:26,0:26:78.25:0,78,1239	0/0:21,0:21:63.21:0,63,983	0/0:20,0:20:60.16:0,60,886	0/0:21,0:21:62.76:0,63,747	0/0:21,0:21:60.19:0,60,943	0/0:21,0:21:63.22:0,63,1027	0/0:21,0:21:54.18:0,54,853	0/0:29,0:29:84.29:0,84,1357	0/0:11,0:11:33.11:0,33,531	0/0:19,0:19:54.18:0,54,864	0/0:27,0:27:33.06:0,33,398	0/0:14,0:13:3.05:0,3,233	0/0:20,0:19:45.46:0,45,481	0/0:17,0:17:42.85:0,43,379	0/0:18,0:18:51.03:0,51,767	0/0:24,0:24:72.22:0,72,1103	0/0:11,0:11:33.08:0,33,484	0/0:27,0:27:75.26:0,75,1213	0/0:22,0:22:66.23:0,66,1068	0/0:21,0:21:63.17:0,63,943	0/0:12,0:12:32.89:0,33,374	0/0:27,0:27:72.25:0,72,1170	0/0:26,0:26:60.20:0,60,954	0/0:5,0:5:9.03:0,9,142
chr10	4863887	.	C	CA	1144.86	PASS	AB=0.913;AC=15;AF=0.268;AN=56;BaseQRankSum=9.986;DP=571;FS=15.789;HRun=10;HaplotypeScore=115.5328;InbreedingCoeff=0.8766;MQ=63.29;MQ0=2;MQRankSum=-7.571;QD=6.70;ReadPosRankSum=-2.831;VQSLOD=-0.0190;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:24:48.75:257,49,0	0/0:7,0:7:17.97:0,18,148	0/0:18,0:12:26.93:0,27,216	0/0:15,0:10:17.89:0,18,138	0/0:27,0:27:69.79:0,70,568	0/1:17,2:21:3.16:3,0,356	0/0:20,1:21:25.05:0,25,411	1/1:10,15:24:53.91:531,54,0	0/0:21,0:21:35.69:0,36,401	0/0:22,0:22:56.91:0,57,465	0/0:22,2:24:21.86:0,22,383	0/0:30,0:30:74.89:0,75,616	0/0:11,0:11:20.95:0,21,172	0/0:19,0:20:46.95:0,47,372	1/1:23,0:29:44.55:210,45,0	1/1:13,0:15:15.86:86,16,0	1/1:23,0:22:13.06:88,13,0	1/1:13,0:17:7.20:82,7,0	0/0:17,0:17:41.86:0,42,333	0/0:27,0:27:59.87:0,60,489	0/0:10,0:10:17.96:0,18,148	0/0:27,0:27:65.89:0,66,542	0/0:21,0:22:62.99:0,63,491	0/0:21,0:21:50.90:0,51,412	1/1:13,0:14:14.41:78,14,0	0/0:27,0:27:68.90:0,69,565	0/0:26,0:26:50.91:0,51,418	0/0:7,0:7:2.96:0,3,25
chr10	4863896	.	AACC	A	1639.93	PASS	AB=0.977;AC=9;AF=0.161;AN=56;BaseQRankSum=11.875;DP=590;FS=19.442;HRun=0;HaplotypeScore=131.9787;InbreedingCoeff=0.0678;MQ=56.78;MQ0=5;MQRankSum=-9.661;QD=10.72;ReadPosRankSum=-3.018;VQSLOD=1.4792;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:23,4:27:99:175,0,201	0/0:8,0:8:21.04:0,21,418	0/0:17,0:10:30.10:0,30,588	0/0:20,0:10:29.13:0,29,456	0/0:29,0:29:81.39:0,81,1613	0/0:23,0:23:69.19:0,69,1178	0/0:21,0:21:60.21:0,60,1179	0/0:26,0:23:34:0,34,725	0/0:21,0:21:59.63:0,60,1171	0/0:25,0:25:75.25:0,75,1422	0/0:27,0:27:81.26:0,81,1530	0/0:31,0:31:93.32:0,93,1813	0/0:10,0:10:24.03:0,24,484	0/0:21,0:21:60.18:0,60,1149	0/1:28,1:29:79.96:591,0,80	0/1:16,0:15:67.99:295,0,68	0/1:20,0:18:99:148,0,183	1/1:14,0:14:9.15:282,9,0	0/0:18,0:17:46.49:0,46,855	0/0:26,0:26:78.27:0,78,1520	0/0:8,0:8:21.04:0,21,418	0/0:28,0:28:81.21:0,81,1573	0/0:25,0:25:75.06:0,75,1329	0/0:20,0:20:60.18:0,60,1147	0/1:12,0:12:75.47:264,0,75	0/0:33,0:33:49.45:0,49,805	0/1:27,0:27:8.27:8,0,577	0/1:8,0:8:12.29:17,0,12
chr10	4863900	.	AAAACAAAC	A	4716.94	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=13.261;DP=588;FS=3.870;HRun=0;HaplotypeScore=185.1001;InbreedingCoeff=0.8836;MQ=56.35;MQ0=6;MQRankSum=-10.513;QD=24.57;ReadPosRankSum=-2.843;VQSLOD=4.2699;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:27:8.89:279,0,9	0/0:7,0:7:21.05:0,21,693	0/0:18,0:10:9.03:0,9,189	0/0:21,0:10:12.01:0,12,319	0/0:29,0:29:57.20:0,57,1964	0/0:25,0:25:45.15:0,45,1595	0/0:18,0:20:27.04:0,27,776	0/0:22,0:19:23.18:0,23,162	0/0:21,0:21:38.18:0,38,1630	0/0:26,0:26:54.17:0,54,1848	0/0:27,0:27:45.37:0,45,2420	0/0:31,0:31:69.24:0,69,2637	0/0:9,0:9:27.08:0,27,958	0/0:20,0:20:51.17:0,51,1803	1/1:30,0:30:45.70:558,46,0	1/1:16,0:15:24.01:226,24,0	1/1:21,0:19:8.17:98,8,0	1/1:17,0:17:27.68:327,28,0	0/0:18,0:16:30.10:0,30,1084	0/0:26,0:26:54.19:0,54,1895	0/0:7,0:7:12.04:0,12,497	0/0:28,0:28:57.20:0,57,2117	0/0:22,0:22:36.08:0,36,1157	0/0:19,0:19:42.11:0,42,1503	1/1:13,0:13:30.07:378,30,0	1/1:9,26:35:72.21:1634,72,0	1/1:9,18:27:39.05:987,39,0	1/1:0,6:6:9.03:229,9,0
chr10	4863902	.	AAC	A	601.59	PASS	AB=0.950;AC=9;AF=0.161;AN=56;BaseQRankSum=13.347;DP=589;FS=16.669;HRun=0;HaplotypeScore=128.8788;InbreedingCoeff=0.0373;MQ=56.15;MQ0=8;MQRankSum=-10.781;QD=3.71;ReadPosRankSum=0.617;VQSLOD=1.6901;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:16.83:0,17,487	0/0:7,0:7:21.07:0,21,375	0/0:19,0:10:30.10:0,30,425	0/0:23,0:12:24.96:0,25,347	0/0:29,0:29:87.28:0,87,1444	0/0:23,0:23:69.19:0,69,1092	0/0:21,0:21:51.79:0,52,807	0/0:23,0:19:57.18:0,57,749	0/0:23,0:23:65.48:0,65,992	0/0:26,0:26:75.24:0,75,1212	0/0:27,0:27:60.34:0,60,1284	0/0:30,0:30:90.27:0,90,1489	0/0:9,0:9:27.09:0,27,487	0/0:21,0:21:63.20:0,63,1070	0/1:29,0:29:99:238,0,166	0/1:11,5:15:96.18:118,0,96	0/1:22,1:21:8.74:9,0,260	0/1:16,0:16:99:100,0,130	0/0:18,0:16:45.14:0,45,706	0/0:26,0:26:75.20:0,75,1235	0/0:8,0:8:24.06:0,24,356	0/0:27,0:27:81.25:0,81,1329	0/0:21,0:21:59.69:0,60,941	0/0:19,0:19:51.17:0,51,884	0/1:12,1:13:97.97:125,0,98	0/1:34,0:34:79.57:80,0,275	0/1:25,0:25:49.28:49,0,192	1/1:6,0:6:6.66:22,7,0
chr10	4863904	.	CAAA	C	1555.87	PASS	AB=0.882;AC=10;AF=0.179;AN=56;BaseQRankSum=13.910;DP=593;FS=12.565;HRun=4;HaplotypeScore=135.3181;InbreedingCoeff=0.0006;MQ=55.99;MQ0=9;MQRankSum=-10.011;QD=8.23;ReadPosRankSum=0.017;VQSLOD=-0.4890;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:23,4:27:67.51:68,0,426	0/0:7,0:7:21.07:0,21,482	0/0:19,0:10:30.10:0,30,440	0/0:25,0:13:31.33:0,31,423	0/0:30,0:30:90.29:0,90,1823	0/0:23,0:23:69.19:0,69,1375	0/0:21,0:21:50.65:0,51,868	0/0:24,0:20:57.16:0,57,706	0/0:23,0:23:68.68:0,69,1311	0/0:25,0:25:75.25:0,75,1528	0/0:26,0:26:76.48:0,76,1649	0/0:30,0:30:90.28:0,90,1901	0/0:10,0:10:30.10:0,30,674	0/0:22,0:22:66.21:0,66,1386	0/1:14,15:29:96.25:496,0,96	0/1:16,0:16:37.44:230,0,37	0/1:22,0:21:51.33:51,0,169	0/1:11,4:16:99:218,0,104	0/0:20,0:17:51.08:0,51,941	0/0:25,0:25:75.25:0,75,1607	0/0:8,0:8:24.08:0,24,463	0/0:27,0:27:81.24:0,81,1661	0/0:20,0:21:60.20:0,60,1149	0/0:18,0:18:51.17:0,51,1116	0/1:8,5:13:81.65:233,0,82	0/1:33,0:33:99:241,0,209	0/1:25,0:25:99:126,0,179	1/1:6,0:6:8.48:41,8,0
chr10	4863909	.	AAAC	A	2151.66	PASS	AB=0.859;AC=10;AF=0.179;AN=56;BaseQRankSum=14.453;DP=587;FS=10.262;HRun=0;HaplotypeScore=129.3761;InbreedingCoeff=0.0189;MQ=53.69;MQ0=10;MQRankSum=-11.484;QD=11.69;ReadPosRankSum=0.946;VQSLOD=2.7594;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:20,4:24:99:166,0,325	0/0:7,0:7:21.07:0,21,451	0/0:24,0:14:32.83:0,33,423	0/0:27,0:13:22.80:0,23,408	0/0:30,0:30:84.28:0,84,1649	0/0:23,0:23:63.21:0,63,1247	0/0:15,0:15:30.11:0,30,685	0/0:24,0:19:51.15:0,51,597	0/0:22,0:22:65.99:0,66,1268	0/0:26,0:26:78.25:0,78,1483	0/0:25,0:25:73.13:0,73,1520	0/0:29,0:29:84.28:0,84,1733	0/0:14,0:13:39.13:0,39,753	0/0:22,0:22:63.21:0,63,1298	0/1:12,14:26:99:599,0,105	1/1:11,6:16:14.20:377,14,0	0/1:19,2:21:89.99:184,0,90	0/1:11,4:15:87.85:273,0,88	0/0:18,0:15:45.13:0,45,844	0/0:27,0:27:75.25:0,75,1519	0/0:10,0:10:30.10:0,30,523	0/0:25,0:25:72.22:0,72,1481	0/0:18,0:18:53.21:0,53,976	0/0:17,0:17:48.16:0,48,1007	0/1:8,6:14:66.71:331,0,67	0/1:34,0:34:99:194,0,229	0/1:24,0:25:99:142,0,149	0/1:7,0:7:24.18:35,0,24
chr10	4863912	.	C	CCA	2244.97	PASS	AB=0.836;AC=6;AF=0.107;AN=56;BaseQRankSum=9.734;DP=607;FS=12.739;HRun=0;HaplotypeScore=127.9663;InbreedingCoeff=-0.1217;MQ=53.32;MQ0=11;MQRankSum=-10.220;QD=17.27;ReadPosRankSum=-0.497;VQSLOD=3.1804;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:20,4:24:99:254,0,470	0/0:7,0:7:21.07:0,21,342	0/0:23,0:12:28.89:0,29,401	0/0:28,0:13:29.97:0,30,428	0/0:30,0:29:84.26:0,84,1320	0/0:21,0:21:63.20:0,63,1000	0/0:16,0:16:45.09:0,45,656	0/0:22,0:18:51.12:0,51,786	0/0:22,0:22:66.23:0,66,1066	0/0:25,0:25:75.26:0,75,1223	0/0:26,0:26:75.04:0,75,1185	0/0:29,0:29:84.28:0,84,1335	0/0:15,0:14:39.13:0,39,635	0/0:22,0:22:66.21:0,66,1048	0/1:23,2:25:99:564,0,119	0/1:14,1:15:58.18:383,0,58	0/1:18,11:27:99:451,0,165	0/1:16,5:21:99:416,0,158	0/0:18,0:15:45.15:0,45,712	0/0:25,0:25:75.25:0,75,1193	0/0:12,0:12:30.10:0,30,486	0/0:25,0:25:72.25:0,72,1172	0/0:19,0:20:60.12:0,60,916	0/0:20,0:20:46.66:0,47,818	0/1:11,5:16:78.04:303,0,78	0/0:34,0:34:94.90:0,95,826	0/0:26,0:26:59.36:0,59,521	0/0:9,0:9:11.68:0,12,105
chr10	4864342	.	T	TA	8443.66	PASS	AB=0.521;AC=17;AF=0.304;AN=56;BaseQRankSum=-15.712;DP=609;FS=4.911;HRun=1;HaplotypeScore=59.0008;InbreedingCoeff=0.9335;MQ=80.81;MQ0=0;MQRankSum=-1.798;QD=39.09;ReadPosRankSum=0.140;VQSLOD=5.3060;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,105,1363	0/0:11,0:11:30.10:0,30,389	0/0:20,0:20:51.42:0,51,637	0/0:12,0:12:33.06:0,33,372	0/0:11,0:11:33.06:0,33,396	0/0:22,0:22:63.20:0,63,818	0/0:28,0:28:84.22:0,84,1045	1/1:1,29:30:81.23:1169,81,0	0/0:18,0:18:54.16:0,54,684	0/0:19,0:19:57.19:0,57,739	0/0:11,0:11:30.04:0,30,344	0/0:29,0:29:81.26:0,81,1049	0/0:14,0:14:39.13:0,39,506	0/0:32,0:32:96.31:0,96,1244	1/1:0,23:23:63.21:944,63,0	1/1:0,18:18:50.83:764,51,0	1/1:0,23:23:63.21:944,63,0	1/1:1,41:42:99:1618,108,0	0/0:23,0:23:69.19:0,69,864	0/0:20,0:20:51.08:0,51,624	0/0:40,0:40:99:0,117,1481	0/0:9,0:9:27.09:0,27,351	0/0:10,0:10:30.10:0,30,389	0/0:28,0:28:81.25:0,81,1036	1/1:0,15:15:39.06:557,39,0	0/1:2,23:25:5.67:911,0,6	1/1:1,21:23:60.20:896,60,0	1/1:1,16:17:45.10:641,45,0
chr10	4865508	.	C	CAAGA	13552.30	PASS	AB=0.575;AC=19;AF=0.339;AN=56;BaseQRankSum=-13.417;DP=666;FS=0.676;HRun=0;HaplotypeScore=103.5407;InbreedingCoeff=0.9574;MQ=90.29;MQ0=1;MQRankSum=-6.655;QD=56.94;ReadPosRankSum=1.048;VQSLOD=6.1320;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,27:33:78.17:1920,78,0	0/0:11,0:11:30.10:0,30,540	0/0:29,0:29:81.28:0,81,1420	0/0:25,0:25:69.23:0,69,1219	0/0:23,0:23:58.75:0,59,1029	0/0:16,0:16:48.15:0,48,843	0/0:33,0:33:87.25:0,87,1490	1/1:14,16:31:75.26:1922,75,0	0/0:18,0:18:51.16:0,51,898	0/0:22,0:22:66.23:0,66,1201	0/0:13,0:13:33.11:0,33,600	0/0:27,0:27:72.23:0,72,1272	0/0:26,0:26:72.25:0,72,1295	0/0:25,0:25:69.24:0,69,1247	1/1:8,15:23:45.15:1095,45,0	1/1:4,18:23:51.18:1285,51,0	1/1:7,32:39:72.72:1887,73,0	1/1:3,21:23:51.18:1312,51,0	0/0:25,0:25:63.22:0,63,1130	0/0:15,0:15:42.13:0,42,726	0/0:59,0:59:99:0,157,2837	0/0:12,0:12:33.11:0,33,600	0/0:14,0:14:33.11:0,33,593	0/0:35,0:35:96.33:0,96,1746	1/1:1,9:11:27.09:703,27,0	0/1:6,15:22:0.37:1262,0,0	1/1:2,21:24:66.23:1696,66,0	1/1:0,6:6:18.06:471,18,0
chr10	4865810	.	T	TG	1528.76	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-3.936;DP=529;FS=0.000;HRun=6;HaplotypeScore=57.5373;InbreedingCoeff=0.9923;MQ=86.56;MQ0=0;MQRankSum=0.187;QD=25.91;ReadPosRankSum=1.628;VQSLOD=3.8362;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:72.03:0,72,695	0/0:6,0:6:18.04:0,18,184	0/0:20,0:20:39.03:0,39,384	0/0:19,0:19:38.32:0,38,352	0/0:18,0:18:42.08:0,42,427	0/0:25,0:25:69.09:0,69,687	0/0:21,0:21:57.04:0,57,559	0/0:12,0:12:27.01:0,27,264	0/0:25,0:25:69.15:0,69,699	0/0:25,0:25:54.11:0,54,550	0/0:15,0:15:33.07:0,33,337	0/0:19,0:19:57.12:0,57,575	0/0:14,0:14:38.12:0,38,356	0/0:18,0:18:54.12:0,54,551	0/0:19,0:19:54.12:0,54,551	0/0:24,0:24:57.11:0,57,575	0/0:24,0:24:54.10:0,54,545	0/0:23,0:23:63.12:0,63,634	0/0:14,0:14:30.05:0,30,298	0/0:8,0:8:24.04:0,24,238	0/0:27,0:27:60.13:0,60,612	0/0:7,0:7:18.04:0,18,183	0/0:11,0:11:27.93:0,28,271	0/0:29,0:29:66.09:0,66,656	0/0:19,0:19:54.10:0,54,540	1/1:4,23:27:41.59:820,42,0	1/1:6,14:20:39.12:489,39,0	1/1:1,11:12:30.08:363,30,0
chr10	4865888	.	CA	C	408.64	PASS	AB=0.978;AC=3;AF=0.054;AN=56;BaseQRankSum=0.055;DP=466;FS=18.562;HRun=10;HaplotypeScore=79.8674;InbreedingCoeff=0.5916;MQ=73.71;MQ0=3;MQRankSum=4.084;QD=6.10;ReadPosRankSum=-3.700;VQSLOD=-0.3621;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:15:38.94:0,39,411	0/0:3,0:5:8.75:0,9,63	0/1:42,1:27:12.07:12,0,249	0/0:52,1:29:37.78:0,38,308	0/0:24,0:24:63.13:0,63,683	0/0:12,0:12:24.06:0,24,265	0/0:20,1:22:30.93:0,31,551	1/1:4,19:23:59.01:500,59,0	0/0:22,1:23:36.94:0,37,596	0/0:18,0:18:45.12:0,45,496	0/0:13,0:13:33.04:0,33,344	0/0:14,0:14:39.10:0,39,424	0/0:12,0:12:30.08:0,30,331	0/0:12,0:12:27.07:0,27,297	0/0:12,0:12:33.08:0,33,357	0/0:7,0:7:15.04:0,15,166	0/0:15,0:15:39.08:0,39,418	0/0:12,0:12:33.09:0,33,364	0/0:15,0:15:43:0,43,460	0/0:14,0:15:35.93:0,36,379	0/0:6,0:6:8.39:0,8,75	0/0:13,0:13:30.07:0,30,323	0/0:11,0:12:33.09:0,33,365	0/0:14,0:14:29.95:0,30,312	0/0:14,0:15:41.95:0,42,443	0/0:4,0:15:35.02:0,35,186	0/0:12,0:17:25.05:0,25,139	0/0:3,0:7:17.34:0,17,102
chr10	4866162	.	T	TA	1607.63	PASS	AB=0.986;AC=21;AF=0.375;AN=56;BaseQRankSum=9.576;DP=534;FS=2.529;HRun=9;HaplotypeScore=87.6279;InbreedingCoeff=0.8866;MQ=78.37;MQ0=9;MQRankSum=-6.079;QD=6.46;ReadPosRankSum=-0.229;VQSLOD=1.3801;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,21:25:39.93:549,40,0	0/0:3,0:3:9:0,9,78	0/0:54,0:27:23.13:0,23,215	0/1:69,1:38:11.01:11,0,149	0/0:26,0:26:65.98:0,66,573	0/0:13,0:14:38.03:0,38,319	0/0:16,0:16:41.97:0,42,360	1/1:8,1:31:41.68:230,42,0	0/0:11,0:11:20.98:0,21,182	0/0:18,0:18:44.98:0,45,388	0/0:10,0:10:21.88:0,22,183	0/0:15,0:15:38.99:0,39,338	0/0:15,0:15:11.79:0,12,331	0/0:15,0:15:38.96:0,39,331	1/1:3,0:12:22.85:121,23,0	1/1:3,1:8:11.48:62,11,0	1/1:8,1:25:20.39:112,20,0	1/1:7,0:20:51.35:268,51,0	0/0:22,0:22:50.94:0,51,433	0/0:11,0:11:7.42:0,7,206	0/0:7,0:7:21:0,21,182	0/0:6,0:6:11.99:0,12,104	0/0:18,0:18:47.99:0,48,417	0/0:24,0:24:62.90:0,63,533	1/1:5,0:17:14.20:73,14,0	1/1:3,0:21:22.11:195,22,0	1/1:1,0:9:17.04:85,17,0	1/1:0,3:11:20.09:118,20,0
chr10	4868622	.	G	GCAAA	12022.12	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=3.915;DP=725;FS=5.287;HRun=0;HaplotypeScore=113.8403;InbreedingCoeff=0.9973;MQ=63.34;MQ0=3;MQRankSum=-7.160;QD=40.07;ReadPosRankSum=3.157;VQSLOD=4.7293;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,37:53:84.29:1993,84,0	0/0:9,0:9:27.09:0,27,456	0/0:22,0:20:42.13:0,42,642	0/0:22,0:19:48.12:0,48,705	0/0:27,0:27:72.25:0,72,1214	0/0:28,0:28:72.25:0,72,1215	0/0:29,0:29:66.23:0,66,1114	1/1:17,9:26:30.08:691,30,0	0/0:21,0:21:45.15:0,45,759	0/0:31,0:31:63.22:0,63,1056	0/0:15,0:15:42.14:0,42,709	0/0:23,0:23:63.20:0,63,1037	0/0:23,0:23:54.18:0,54,887	0/0:18,0:18:51.17:0,51,861	1/1:8,22:31:48.16:1193,48,0	1/1:5,24:31:66.23:1641,66,0	1/1:11,20:34:48.16:1194,48,0	1/1:11,19:30:33.11:821,33,0	0/0:16,0:15:33.11:0,33,555	0/0:19,0:19:57.20:0,57,961	0/0:37,0:37:81.28:0,81,1351	0/0:16,0:16:45.15:0,45,750	0/0:22,0:22:51.17:0,51,851	0/0:47,0:47:99:0,117,1945	1/1:9,14:22:45.11:1052,45,0	1/1:13,15:29:75.24:1720,75,0	1/1:8,22:32:54.19:1343,54,0	1/1:2,5:10:15.05:373,15,0
chr10	4868728	.	C	CTT	2566.31	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=14.328;DP=505;FS=35.106;HRun=0;HaplotypeScore=115.4455;InbreedingCoeff=0.9850;MQ=60.46;MQ0=15;MQRankSum=-10.895;QD=14.92;ReadPosRankSum=2.680;VQSLOD=1.8406;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:14,3:17:23.42:191,23,0	0/0:8,0:8:21.03:0,21,267	0/0:15,0:10:20.17:0,20,214	0/0:16,0:12:23.76:0,24,260	0/0:13,0:12:33.03:0,33,363	0/0:29,0:29:77.99:0,78,1048	0/0:21,0:21:57.09:0,57,724	1/1:22,0:18:49.36:370,49,0	0/0:23,0:23:63.15:0,63,914	0/0:23,0:23:67.03:0,67,871	0/0:8,0:8:15:0,15,130	0/0:12,0:12:29.96:0,30,392	0/0:17,0:17:48.12:0,48,691	0/0:16,0:15:42.11:0,42,601	1/1:28,1:27:48.66:383,49,0	1/1:24,1:24:68.13:475,68,0	1/1:11,0:8:15.60:94,16,0	1/1:4,0:4:11.76:76,12,0	0/0:22,0:23:66.07:0,66,831	0/0:9,0:9:23.91:0,24,298	0/0:38,0:36:81.38:0,81,1049	0/0:22,0:21:56.07:0,56,753	0/0:16,0:16:38.25:0,38,467	0/0:23,0:22:51.11:0,51,719	1/1:13,0:13:28.27:202,28,0	1/1:24,3:25:70.64:642,71,0	1/1:13,0:13:33.62:241,34,0	1/1:10,1:10:13.94:113,14,0
chr10	4868735	.	CTCT	C	4992.83	PASS	AB=0.647;AC=18;AF=0.321;AN=56;BaseQRankSum=14.879;DP=481;FS=15.193;HRun=0;HaplotypeScore=103.8170;InbreedingCoeff=0.8076;MQ=49.59;MQ0=22;MQRankSum=-11.703;QD=32.01;ReadPosRankSum=4.547;VQSLOD=4.3438;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,7:14:22.48:358,22,0	0/0:7,0:7:18.06:0,18,381	0/0:8,0:3:9.03:0,9,139	0/0:13,0:9:18.32:0,18,328	0/0:15,0:14:30.10:0,30,585	0/0:25,0:25:64.10:0,64,1492	0/0:22,0:21:35.94:0,36,1103	0/1:7,13:14:25.18:331,0,25	0/0:22,0:22:60.21:0,60,1415	0/0:27,0:27:72.24:0,72,1471	0/0:13,0:11:15.52:0,16,216	0/0:12,0:12:30.10:0,30,600	0/0:19,0:19:47.83:0,48,1056	0/0:16,0:15:45.14:0,45,937	1/1:3,21:23:47.53:786,48,0	1/1:5,20:25:57.12:1115,57,0	0/1:6,5:8:18.88:186,0,19	1/1:1,4:4:9.03:156,9,0	0/0:21,0:21:62.88:0,63,1341	0/0:9,0:9:24.08:0,24,541	0/0:38,0:36:81.74:0,82,1787	0/0:23,0:21:57.66:0,58,1251	0/0:15,0:15:36.08:0,36,720	0/0:20,0:19:45.15:0,45,1040	1/1:2,10:12:30.02:477,30,0	1/1:7,19:23:59.23:1030,59,0	1/1:1,8:8:21.07:363,21,0	1/1:3,4:6:11.57:189,12,0
chr10	4868750	.	TCTCC	T	1299.15	PASS	AB=0.974;AC=18;AF=0.333;AN=54;BaseQRankSum=11.418;DP=436;FS=7.301;HRun=0;HaplotypeScore=119.9098;InbreedingCoeff=0.6803;MQ=43.80;MQ0=23;MQRankSum=-9.176;QD=7.97;ReadPosRankSum=2.028;VQSLOD=1.9665;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:21:27.27:239,27,0	0/0:4,0:4:6.02:0,6,134	./.	0/0:6,0:4:5.49:0,5,29	0/0:11,0:10:12.02:0,12,164	0/0:21,0:21:40.19:0,40,458	0/0:20,0:18:21.28:0,21,334	0/1:17,0:10:27.26:48,0,27	0/0:19,0:19:50.86:0,51,484	0/0:24,0:23:48.99:0,49,461	0/0:10,0:8:5.92:0,6,114	0/0:12,0:12:22.82:0,23,216	0/0:17,0:17:32.53:0,33,276	0/0:15,0:14:29.70:0,30,279	1/1:20,4:23:35.47:305,35,0	1/1:20,2:22:35.54:294,36,0	1/1:13,1:9:0.68:64,1,0	1/1:9,0:8:5.71:32,6,0	0/0:23,0:22:47.43:0,47,582	0/0:8,0:8:9.49:0,9,142	0/0:35,0:32:50.02:0,50,596	0/0:16,0:14:12.01:0,12,132	0/0:10,0:10:12.02:0,12,193	0/0:19,0:18:29.23:0,29,355	1/1:9,2:11:17.81:162,18,0	0/1:27,0:22:21.06:217,0,21	1/1:9,0:8:14.56:88,15,0	1/1:7,0:5:5.92:39,6,0
chr10	4868754	.	C	CCCT	330.60	PASS	AB=0.880;AC=6;AF=0.111;AN=54;BaseQRankSum=6.436;DP=425;FS=1.675;HRun=0;HaplotypeScore=122.4962;InbreedingCoeff=0.0007;MQ=42.69;MQ0=30;MQRankSum=-4.761;QD=3.52;ReadPosRankSum=0.047;VQSLOD=2.3567;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:16,7:22:37.49:236,0,37	0/0:4,0:4:6.02:0,6,105	./.	0/1:5,0:3:2.76:3,0,47	0/0:10,0:9:12.04:0,12,210	0/0:20,0:20:45.14:0,45,701	0/0:18,0:16:38.34:0,38,614	0/1:21,2:11:40.87:106,0,41	0/0:18,0:18:51.11:0,51,807	0/0:27,0:26:60.19:0,60,990	0/0:10,0:8:6.02:0,6,106	0/0:15,0:13:22.58:0,23,340	0/0:18,0:18:36.10:0,36,602	0/0:12,0:11:29.46:0,29,472	0/1:22,0:21:27.03:27,0,37	0/0:18,0:18:6.37:0,6,87	0/0:14,0:9:7.12:0,7,35	0/1:4,4:7:1.69:66,0,2	0/0:20,0:18:54.15:0,54,867	0/0:8,0:8:12.03:0,12,183	0/0:32,0:29:54.09:0,54,873	0/0:14,0:12:15.04:0,15,236	0/0:8,0:8:15.05:0,15,246	0/0:19,0:18:33.11:0,33,560	0/1:11,1:11:6.06:6,0,9	0/0:27,0:22:27.71:0,28,220	0/0:10,0:8:5.13:0,5,26	0/0:9,0:6:8.54:0,9,50
chr10	4868832	.	TCACACACACA	T	358.99	PASS	AB=0.929;AC=10;AF=0.185;AN=54;BaseQRankSum=5.676;DP=444;FS=4.383;HRun=0;HaplotypeScore=113.7507;InbreedingCoeff=0.4911;MQ=43.34;MQ0=32;MQRankSum=-3.523;QD=4.49;ReadPosRankSum=-3.255;VQSLOD=1.2130;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:13:1.18:2,1,0	0/0:6,0:6:18.06:0,18,735	0/0:8,0:3:9.03:0,9,259	0/0:20,0:6:10.18:0,10,503	0/0:13,0:11:9.37:0,9,365	0/0:22,0:16:36.12:0,36,1440	0/0:27,0:18:32.86:0,33,1082	0/1:15,0:16:99:99,0,115	0/0:17,0:12:24.08:0,24,899	0/0:23,0:21:54.15:0,54,2009	0/0:10,0:9:6.02:0,6,243	0/0:19,0:19:34.06:0,34,1357	0/0:15,0:15:27.09:0,27,1063	0/0:19,0:18:30.10:0,30,1050	./.	1/1:4,5:11:11.96:278,12,0	1/1:5,7:10:2.47:87,2,0	0/1:11,0:5:11.88:12,0,105	0/0:9,0:9:21:0,21,766	0/0:16,0:13:33.11:0,33,1231	0/0:33,0:25:42.14:0,42,1529	0/0:9,0:12:20.32:0,20,968	0/0:14,0:12:21.07:0,21,827	0/0:27,0:26:20.27:0,20,733	1/1:5,8:13:0.47:1,0,0	0/0:16,0:15:33.03:0,33,840	0/0:18,0:15:25.12:0,25,578	0/0:9,0:8:21.07:0,21,625
chr10	4869871	.	GC	G	252.71	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-0.845;DP=394;FS=2.536;HRun=8;HaplotypeScore=50.3832;InbreedingCoeff=0.8486;MQ=82.31;MQ0=0;MQRankSum=2.040;QD=16.85;ReadPosRankSum=-1.054;VQSLOD=3.2646;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:63.18:0,63,739	0/0:6,0:6:12.04:0,12,142	0/0:16,0:16:29.03:0,29,295	0/0:13,0:13:24.07:0,24,283	0/0:10,0:10:21.02:0,21,219	0/0:16,0:16:39.12:0,39,467	0/0:23,0:23:51.16:0,51,614	1/1:1,14:15:36.05:347,36,0	0/0:14,0:14:36.09:0,36,426	0/0:11,0:11:30.08:0,30,351	0/0:4,0:4:12.04:0,12,139	0/0:15,0:15:45.12:0,45,525	0/0:10,0:10:21.06:0,21,249	0/0:13,0:13:33.09:0,33,384	0/0:15,0:15:42.09:0,42,487	0/0:16,0:16:45.14:0,45,541	0/0:25,0:25:66.20:0,66,797	0/0:17,0:17:42.11:0,42,486	0/0:22,0:22:38.44:0,38,407	0/0:10,0:10:27.01:0,27,282	0/0:21,0:21:54.15:0,54,640	0/0:8,0:8:24.03:0,24,258	0/0:5,0:5:12.04:0,12,142	0/0:20,0:20:48.09:0,48,550	0/0:7,0:7:12:0,12,127	0/0:8,0:8:18.06:0,18,217	0/0:25,0:25:69.15:0,69,785	0/0:4,0:4:12.04:0,12,145
chr10	4869956	.	TC	T	636.75	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.143;DP=495;FS=0.000;HRun=6;HaplotypeScore=58.9658;InbreedingCoeff=0.9234;MQ=82.80;MQ0=1;MQRankSum=0.308;QD=23.58;ReadPosRankSum=0.317;VQSLOD=2.8274;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,24:26:35.72:731,36,0	0/0:5,0:5:12.03:0,12,143	0/0:15,0:15:31.95:0,32,437	0/0:22,0:22:53.38:0,53,597	0/0:11,0:11:30.10:0,30,391	0/0:14,0:14:36.06:0,36,439	0/0:25,0:25:72.22:0,72,933	0/0:20,0:20:54.17:0,54,698	0/0:15,0:15:42.11:0,42,524	0/0:17,0:17:42.11:0,42,524	0/0:9,0:9:24.08:0,24,315	0/0:23,0:23:66.20:0,66,840	0/0:21,0:21:63.19:0,63,806	0/0:19,0:19:54.18:0,54,709	0/0:21,0:21:63.20:0,63,829	0/0:15,0:15:45.15:0,45,592	0/0:38,0:37:99:0,102,1325	0/0:24,0:24:69.20:0,69,880	0/0:14,0:14:27.08:0,27,338	0/0:10,0:10:27.09:0,27,355	0/0:42,0:42:99:0,126,1610	0/0:13,0:13:36.10:0,36,455	0/0:5,0:5:12.04:0,12,157	0/0:19,0:19:54.17:0,54,697	0/0:11,0:11:33.11:0,33,434	0/0:17,0:17:51.12:0,51,639	0/0:18,0:18:54.16:0,54,689	0/0:5,0:5:15.05:0,15,197
chr10	4870249	.	TC	T	2629.47	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.336;DP=734;FS=11.482;HRun=1;HaplotypeScore=70.7073;InbreedingCoeff=0.9614;MQ=82.68;MQ0=0;MQRankSum=-0.643;QD=36.02;ReadPosRankSum=1.675;VQSLOD=3.2863;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,153,2389	0/0:11,0:11:33.11:0,33,518	0/0:20,0:20:57.17:0,57,848	0/0:22,0:22:66.07:0,66,941	0/0:22,0:22:66.23:0,66,1054	0/0:26,0:26:78.27:0,78,1243	0/0:32,0:32:96.33:0,96,1528	0/0:30,0:30:87.28:0,87,1346	0/0:24,0:24:72.22:0,72,1105	0/0:30,0:30:87.30:0,87,1389	0/0:14,0:14:42.13:0,42,633	0/0:21,0:21:63.20:0,63,979	0/0:28,0:28:84.27:0,84,1314	0/0:25,0:25:75.26:0,75,1196	0/0:27,0:27:81.28:0,81,1284	0/0:22,0:22:66.23:0,66,1053	0/0:26,0:26:78.27:0,78,1244	0/0:37,0:37:99:0,105,1650	0/0:44,0:43:99:0,132,2068	0/0:20,0:20:60.20:0,60,953	0/0:37,0:37:99:0,108,1692	0/0:18,0:18:54.18:0,54,862	0/0:12,0:12:36.12:0,36,573	0/0:40,0:40:99:0,120,1910	0/0:21,0:21:63.21:0,63,1004	1/1:1,36:37:81.36:1422,81,0	1/1:0,30:30:90.30:1259,90,0	1/1:0,6:6:6.02:84,6,0
chr10	4873034	.	CT	C	2550.24	PASS	AB=0.970;AC=21;AF=0.375;AN=56;BaseQRankSum=9.427;DP=567;FS=8.685;HRun=12;HaplotypeScore=73.0884;InbreedingCoeff=0.8663;MQ=77.55;MQ0=4;MQRankSum=-2.393;QD=10.12;ReadPosRankSum=2.102;VQSLOD=2.5948;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,0:31:44.79:129,45,0	0/0:4,0:4:12.02:0,12,122	0/1:29,0:21:12.57:13,0,115	0/0:26,0:17:15.96:0,16,117	0/0:28,0:31:60.21:0,60,566	0/0:17,0:17:42.08:0,42,421	0/0:11,1:16:11.40:0,11,282	1/1:7,0:39:59.26:171,59,0	0/0:15,0:15:39.03:0,39,376	0/0:23,0:23:56.87:0,57,549	0/0:10,0:12:33.21:0,33,302	0/0:16,0:17:38.19:0,38,397	0/0:10,3:13:3.79:0,4,207	0/0:13,0:14:29.88:0,30,280	1/1:1,17:18:20.19:300,20,0	1/1:1,13:14:11.40:271,11,0	1/1:8,18:26:26.33:387,26,0	1/1:5,21:26:26.30:387,26,0	0/0:20,0:26:46.81:0,47,558	0/0:25,1:26:45.89:0,46,642	0/0:14,0:16:26.04:0,26,277	0/0:17,0:22:43.71:0,44,416	0/0:16,3:20:4.45:0,4,389	0/0:16,0:17:30.04:0,30,293	1/1:3,17:20:17.38:318,17,0	1/1:3,7:10:20.91:162,21,0	1/1:3,13:16:26.85:209,27,0	1/1:0,19:19:53.79:418,54,0
chr10	4873263	.	AC	A	1415.50	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.187;DP=566;FS=25.046;HRun=4;HaplotypeScore=56.3079;InbreedingCoeff=0.8894;MQ=83.57;MQ0=0;MQRankSum=-4.371;QD=29.49;ReadPosRankSum=-0.527;VQSLOD=1.5865;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,41:48:99:1510,126,0	0/0:2,0:2:6.02:0,6,84	0/0:15,0:15:36.95:0,37,471	0/0:17,0:17:39.08:0,39,487	0/0:12,0:12:36.12:0,36,502	0/0:15,0:15:45.15:0,45,630	0/0:31,0:31:87.27:0,87,1200	0/0:29,0:29:75.24:0,75,1036	0/0:21,0:21:63.21:0,63,881	0/0:11,0:11:33.07:0,33,428	0/0:13,0:13:39.13:0,39,544	0/0:19,0:19:54.18:0,54,756	0/0:12,0:12:36.12:0,36,504	0/0:22,0:22:60.19:0,60,823	0/0:28,0:28:78.26:0,78,1092	0/0:21,0:21:60.20:0,60,840	0/0:35,0:35:99:0,102,1402	0/0:29,0:29:87.29:0,87,1218	0/0:22,0:22:60.14:0,60,781	0/0:13,0:13:33.08:0,33,427	0/0:59,0:59:99:0,175,2380	0/0:11,0:11:33.10:0,33,445	0/0:5,0:5:15.05:0,15,210	0/0:27,0:27:78.20:0,78,1049	0/0:16,0:16:48.15:0,48,656	0/0:10,0:10:30.10:0,30,420	0/0:15,0:15:45.14:0,45,616	0/0:8,0:8:24.08:0,24,336
chr10	4874280	.	G	GT	2054.32	PASS	AB=0.958;AC=9;AF=0.161;AN=56;BaseQRankSum=-7.990;DP=586;FS=0.456;HRun=9;HaplotypeScore=61.2921;InbreedingCoeff=0.8874;MQ=80.88;MQ0=2;MQRankSum=0.518;QD=16.98;ReadPosRankSum=-3.455;VQSLOD=2.8949;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:34:90.97:0,91,757	0/0:7,0:7:14.99:0,15,130	0/1:21,0:22:5.71:6,0,192	0/0:25,0:23:20.95:0,21,273	0/0:25,0:25:59.01:0,59,500	0/0:21,0:21:53.99:0,54,468	0/0:14,0:14:32.99:0,33,286	1/1:9,20:29:37.09:617,37,0	0/0:20,0:20:49.96:0,50,408	0/0:25,0:25:62.97:0,63,545	0/0:18,0:18:41.97:0,42,359	0/0:25,0:25:62.94:0,63,540	0/0:9,0:9:20.99:0,21,182	0/0:25,0:25:68.97:0,69,599	0/0:17,0:17:44.95:0,45,384	0/0:28,0:28:65.94:0,66,569	0/0:25,0:25:71.97:0,72,621	0/0:23,0:23:50.91:0,51,430	0/0:25,0:25:62.97:0,63,545	0/0:19,0:19:35.90:0,36,400	0/0:27,0:27:53.94:0,54,469	0/0:14,0:14:38.91:0,39,327	0/0:11,0:11:29.98:0,30,258	0/0:17,0:17:50.97:0,51,438	0/0:11,0:11:32.45:0,32,263	1/1:5,22:27:40.08:651,40,0	1/1:1,24:26:53.98:578,54,0	1/1:4,12:16:33.09:365,33,0
chr10	4874504	.	C	CT	714.83	PASS	AB=0.946;AC=26;AF=0.464;AN=56;BaseQRankSum=2.994;DP=509;FS=5.273;HRun=17;HaplotypeScore=91.5274;InbreedingCoeff=0.0848;MQ=59.72;MQ0=9;MQRankSum=-2.627;QD=1.90;ReadPosRankSum=-1.206;VQSLOD=-0.6203;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:21,1:23:19.10:84,19,0	0/1:6,0:11:8.67:9,0,11	1/1:22,0:10:0.47:1,0,0	0/1:12,0:9:0.14:9,0,0	0/1:19,0:19:7.68:8,0,92	0/1:21,1:22:38.87:39,0,58	0/0:11,0:11:10.72:0,11,53	0/1:29,0:31:0.51:7,0,1	0/0:19,0:17:14.21:0,14,60	0/1:22,0:23:16.13:16,0,25	0/0:18,0:18:10.08:0,10,49	0/0:18,0:18:15.01:0,15,95	0/1:13,0:13:1.22:1,0,35	0/1:24,1:26:24.63:25,0,54	1/1:10,5:15:6.82:53,7,0	1/1:15,1:15:18.60:101,19,0	1/1:12,2:17:12.87:114,13,0	0/1:9,2:10:15.80:29,0,16	0/0:13,0:14:1:0,1,42	0/0:13,0:13:11.72:0,12,55	0/0:13,0:15:15.30:0,15,72	0/1:8,1:10:19.44:35,0,19	0/1:19,1:20:30.44:30,0,80	0/0:22,0:23:29.64:0,30,133	0/1:16,1:17:6.64:62,0,7	1/1:13,5:19:15.67:107,16,0	0/1:26,2:28:3.75:65,0,4	0/1:11,3:15:4.40:88,0,4
chr10	4874526	.	C	CTT	310.60	PASS	AB=1.000;AC=3;AF=0.056;AN=54;BaseQRankSum=5.045;DP=475;FS=2.408;HRun=8;HaplotypeScore=81.4737;InbreedingCoeff=0.7183;MQ=42.97;MQ0=24;MQRankSum=-1.222;QD=11.50;ReadPosRankSum=-1.929;VQSLOD=0.3427;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:14,7:19:30:404,30,0	0/0:10,0:10:21.05:0,21,232	./.	0/1:5,0:4:0:0,0,0	0/0:26,0:25:29.99:0,30,324	0/0:23,0:23:38.90:0,39,417	0/0:8,0:8:12.02:0,12,134	0/0:21,0:21:38.38:0,38,414	0/0:15,0:13:14.92:0,15,167	0/0:16,0:15:24:0,24,262	0/0:19,0:18:26.85:0,27,291	0/0:19,0:19:17.22:0,17,228	0/0:17,0:16:23.61:0,24,266	0/0:23,0:23:29.95:0,30,362	0/0:18,0:15:18.79:0,19,220	0/0:15,0:13:26.74:0,27,284	0/0:17,0:16:19.47:0,19,209	0/0:17,0:13:2.69:0,3,153	0/0:20,0:18:28.91:0,29,323	0/0:15,0:14:20.97:0,21,208	0/0:12,0:12:15:0,15,167	0/0:15,0:14:19.57:0,20,211	0/0:20,0:20:31.92:0,32,346	0/0:26,0:27:50.56:0,51,527	0/0:19,0:17:32.99:0,33,366	0/0:13,0:13:15.94:0,16,197	0/0:19,0:18:26.97:0,27,301	0/0:17,0:17:14.95:0,15,153
chr10	4874644	.	TGTGGC	T	6710.11	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=15.266;DP=533;FS=11.890;HRun=0;HaplotypeScore=113.0031;InbreedingCoeff=0.9709;MQ=76.76;MQ0=0;MQRankSum=-14.355;QD=43.01;ReadPosRankSum=0.244;VQSLOD=4.4091;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,20:23:39.13:790,39,0	0/0:11,0:11:33.11:0,33,1003	0/0:19,0:19:49.62:0,50,1341	0/0:16,0:16:30.06:0,30,958	0/0:18,0:18:51.18:0,51,1514	0/0:16,0:16:42.14:0,42,1279	0/0:26,0:26:66.22:0,66,1885	1/1:3,9:12:27.07:480,27,0	0/0:23,0:23:63.22:0,63,1871	0/0:20,0:20:51.17:0,51,1473	0/0:11,0:11:21.07:0,21,641	0/0:25,0:25:72.25:0,72,2185	0/0:14,0:14:39.13:0,39,1119	0/0:24,0:24:66.23:0,66,1959	1/1:0,11:11:30.10:614,30,0	1/1:1,20:21:51.18:1043,51,0	1/1:10,9:19:21.07:430,21,0	1/1:4,8:11:21.07:430,21,0	0/0:23,0:23:66.23:0,66,1938	0/0:16,0:16:36.12:0,36,1098	0/0:42,0:42:99:0,120,3534	0/0:17,0:17:51.18:0,51,1555	0/0:8,0:8:21.07:0,21,639	0/0:48,0:48:99:0,132,4002	1/1:0,13:13:27.09:545,27,0	1/1:1,18:19:54.15:1033,54,0	1/1:3,21:24:63.22:1283,63,0	1/1:1,1:2:3.01:61,3,0
chr10	4875021	.	TCG	T	7532.08	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=11.754;DP=518;FS=17.338;HRun=0;HaplotypeScore=64.3901;InbreedingCoeff=0.9595;MQ=76.50;MQ0=0;MQRankSum=-3.317;QD=42.08;ReadPosRankSum=4.196;VQSLOD=4.8759;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,34:35:99:1514,99,0	0/0:12,0:12:36.10:0,36,641	0/0:16,0:15:42.14:0,42,752	0/0:9,0:9:10.72:0,11,313	0/0:20,0:20:18.18:0,18,582	0/0:20,0:20:54.12:0,54,999	0/0:27,0:27:75.17:0,75,1367	0/0:31,0:31:87.29:0,87,1634	0/0:22,0:22:60.21:0,60,1152	0/0:27,0:27:69.20:0,69,1248	0/0:9,0:9:18.14:0,18,367	0/0:21,0:21:60.21:0,60,1152	0/0:17,0:17:45.08:0,45,789	0/0:19,0:19:54.19:0,54,1025	1/1:0,16:16:42.14:643,42,0	1/1:0,17:17:45.15:689,45,0	1/1:0,22:22:66.22:1010,66,0	1/1:0,19:19:51.17:776,51,0	0/0:16,0:16:36.07:0,36,625	0/0:14,0:14:42.14:0,42,790	0/0:20,0:20:60.15:0,60,1069	0/0:11,0:11:24.06:0,24,422	0/0:14,0:14:27.09:0,27,479	0/0:14,0:14:36.12:0,36,693	1/1:0,15:15:45.15:688,45,0	1/1:1,20:21:2.21:743,2,0	1/1:0,20:20:57.19:873,57,0	1/1:0,14:14:39.13:597,39,0
chr10	4881891	.	A	AAG	1646.47	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-9.043;DP=726;FS=13.127;HRun=0;HaplotypeScore=85.9949;InbreedingCoeff=0.9998;MQ=83.45;MQ0=0;MQRankSum=0.647;QD=44.50;ReadPosRankSum=-4.978;VQSLOD=2.6857;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,123,1719	0/0:15,0:15:42.11:0,42,581	0/0:26,0:26:63.16:0,63,858	0/0:26,0:26:66.22:0,66,921	0/0:19,0:19:57.18:0,57,800	0/0:24,0:24:72.24:0,72,1024	0/0:23,0:23:69.23:0,69,985	1/1:4,31:37:99:1741,99,0	0/0:27,0:27:78.26:0,78,1116	0/0:22,0:22:60.20:0,60,860	0/0:18,0:18:54.18:0,54,773	0/0:26,0:26:78.26:0,78,1117	0/0:32,0:32:90.30:0,90,1288	0/0:30,0:30:84.28:0,84,1203	0/0:36,0:36:99:0,105,1471	0/0:27,0:27:78.26:0,78,1116	0/0:24,0:24:69.23:0,69,989	0/0:22,0:22:60.20:0,60,857	0/0:25,0:25:66.18:0,66,901	0/0:22,0:22:60.20:0,60,859	0/0:29,0:29:84.03:0,84,1185	0/0:23,0:23:54.18:0,54,774	0/0:12,0:12:36.11:0,36,498	0/0:36,0:36:99:0,108,1527	0/0:26,0:26:78.26:0,78,1117	0/0:36,0:36:99:0,108,1545	0/0:28,0:28:81.27:0,81,1160	0/0:13,0:13:39.06:0,39,477
chr10	4883855	.	G	GGCA	13697.68	PASS	AB=0.561;AC=17;AF=0.304;AN=56;BaseQRankSum=-16.301;DP=806;FS=2.472;HRun=0;HaplotypeScore=109.9118;InbreedingCoeff=0.9090;MQ=83.76;MQ0=0;MQRankSum=-5.375;QD=52.89;ReadPosRankSum=4.012;VQSLOD=6.7886;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,40:42:90.31:2038,90,0	0/0:8,0:8:21.07:0,21,350	0/0:17,0:17:11.65:0,12,578	0/0:32,0:32:46.41:0,46,1149	0/0:26,0:26:69.24:0,69,1149	0/0:21,0:21:57.17:0,57,900	0/0:36,0:36:99:0,99,1648	0/0:30,0:30:84.22:0,84,1340	0/0:27,0:27:78.15:0,78,1206	0/0:24,0:24:72.23:0,72,1154	0/0:16,0:16:48.15:0,48,775	0/0:38,0:38:99:0,114,1891	0/0:43,0:43:99:0,129,2075	0/0:36,0:36:99:0,99,1615	1/1:1,32:33:96.33:2113,96,0	1/1:7,30:37:75.26:1669,75,0	1/1:3,22:26:60.21:1359,60,0	1/1:2,40:41:99:2349,105,0	0/0:33,0:33:96.30:0,96,1546	0/0:23,0:23:63.22:0,63,1042	0/0:67,0:67:99:0,199,3264	0/0:16,0:16:45.14:0,45,720	0/0:19,0:19:54.11:0,54,814	0/0:35,0:35:99:0,105,1690	1/1:2,21:23:60.21:1329,60,0	0/1:7,24:32:39.60:1566,0,40	1/1:1,13:14:35.92:814,36,0	1/1:0,7:10:21.07:461,21,0
chr10	4890916	.	TTCCC	T	2475.05	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=8.020;DP=384;FS=2.009;HRun=0;HaplotypeScore=84.8018;InbreedingCoeff=0.8976;MQ=58.53;MQ0=27;MQRankSum=-1.924;QD=22.71;ReadPosRankSum=1.307;VQSLOD=3.4705;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:15:34.93:0,35,829	0/0:5,0:5:15.05:0,15,329	0/1:36,0:9:5.14:11,0,5	0/0:59,0:13:26.80:0,27,399	0/0:16,0:16:42.11:0,42,963	0/0:10,0:10:24.08:0,24,557	0/0:14,0:14:27.09:0,27,596	1/1:3,7:10:12.03:180,12,0	0/0:5,0:5:14.79:0,15,314	0/0:14,0:14:33.11:0,33,741	0/0:5,0:5:15.05:0,15,369	0/0:14,0:14:33.11:0,33,819	0/0:11,0:11:23.58:0,24,600	0/0:11,0:11:27.09:0,27,631	1/1:3,13:16:42.13:664,42,0	1/1:1,14:15:36.08:575,36,0	1/1:4,5:9:14.26:214,14,0	1/1:2,10:12:33.07:553,33,0	0/0:10,0:9:24.08:0,24,492	0/0:6,0:6:15.05:0,15,352	0/0:24,0:24:57.20:0,57,1393	0/0:8,0:8:21.07:0,21,523	0/0:9,0:9:24.08:0,24,602	0/0:11,0:11:23.49:0,23,330	1/1:2,9:11:27.09:465,27,0	0/0:11,0:11:33.11:0,33,811	0/0:10,0:10:24.08:0,24,590	0/0:6,0:5:12.04:0,12,299
chr10	4891002	.	TTCC	T	966.59	PASS	AB=1.000;AC=14;AF=0.250;AN=56;BaseQRankSum=7.267;DP=524;FS=0.000;HRun=0;HaplotypeScore=93.9959;InbreedingCoeff=0.4807;MQ=49.18;MQ0=31;MQRankSum=-5.010;QD=4.74;ReadPosRankSum=-0.552;VQSLOD=1.8834;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:6,15:15:3.01:0,3,53	0/0:6,0:6:10.74:0,11,154	0/1:37,0:15:3.40:3,0,328	0/0:55,0:14:29.31:0,29,367	0/0:13,0:10:21.02:0,21,249	0/0:17,0:17:33:0,33,448	0/0:25,0:24:60.20:0,60,947	0/1:16,0:16:2.20:98,0,2	0/0:10,0:10:27.09:0,27,431	0/0:23,0:23:56.85:0,57,858	0/0:8,0:8:6.21:0,6,175	0/0:16,0:14:36.12:0,36,608	0/0:15,0:14:40.02:0,40,609	0/0:22,0:21:51.10:0,51,818	0/1:24,0:23:7.50:101,0,7	0/1:22,0:22:27.95:70,0,28	1/1:26,0:24:21.21:231,21,0	0/1:18,0:17:3.22:94,0,3	0/0:7,0:7:15.31:0,15,179	0/0:13,0:12:24.24:0,24,341	0/0:10,0:10:24.05:0,24,360	0/0:21,0:20:35.50:0,35,526	0/0:18,0:16:38.91:0,39,616	0/0:20,0:19:48.03:0,48,743	0/1:17,0:17:12.67:13,0,28	1/1:25,0:20:22.75:262,23,0	1/1:12,0:8:6.02:91,6,0	1/1:7,0:7:15.01:172,15,0
chr10	4891005	.	C	CT	2969.88	PASS	AB=0.925;AC=16;AF=0.286;AN=56;BaseQRankSum=6.428;DP=524;FS=21.357;HRun=1;HaplotypeScore=79.0249;InbreedingCoeff=0.7607;MQ=48.78;MQ0=34;MQRankSum=-5.187;QD=18.11;ReadPosRankSum=0.987;VQSLOD=2.6500;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:15:3.01:0,3,39	0/0:6,0:6:11.31:0,11,151	0/0:36,0:15:37.91:0,38,428	0/0:53,0:14:31.50:0,32,365	0/0:12,0:9:21:0,21,251	0/0:16,0:16:41.95:0,42,475	0/0:25,0:23:59.48:0,59,777	1/1:6,9:15:32.99:419,33,0	0/0:10,0:10:30.08:0,30,370	0/0:23,0:23:57.66:0,58,738	0/1:7,1:8:29.14:29,0,141	0/0:16,0:14:36.12:0,36,467	0/0:15,0:14:41.87:0,42,516	0/0:24,0:23:54.12:0,54,668	1/1:14,9:22:38.92:431,39,0	1/1:10,12:22:53.85:632,54,0	1/1:7,18:23:57.11:790,57,0	1/1:5,12:16:34.81:429,35,0	0/0:9,0:9:20.64:0,21,228	0/0:15,0:14:30.06:0,30,369	0/0:10,0:9:24.06:0,24,295	0/0:21,0:20:39.08:0,39,487	0/0:20,0:18:38.79:0,39,476	0/0:21,0:20:47.99:0,48,581	1/1:5,12:17:26.80:346,27,0	0/1:24,1:20:32.23:32,0,67	1/1:11,1:8:5.13:58,5,0	0/0:6,0:6:9.45:0,9,37
chr10	4891008	.	CTCTCTCTCT	C	2626.56	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=10.942;DP=565;FS=13.179;HRun=0;HaplotypeScore=135.1363;InbreedingCoeff=0.6668;MQ=47.69;MQ0=39;MQRankSum=-1.473;QD=19.60;ReadPosRankSum=3.317;VQSLOD=1.5656;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:15:3.01:0,3,104	0/0:6,0:6:10.72:0,11,208	0/0:33,0:12:16.95:0,17,300	0/0:49,0:12:29.82:0,30,343	0/0:15,0:11:18.06:0,18,266	0/0:14,0:14:33.44:0,33,601	0/0:28,0:26:66.22:0,66,1642	0/1:13,0:12:12.15:118,0,12	0/0:12,0:11:30.57:0,31,731	0/0:28,0:28:77.07:0,77,1882	0/1:6,0:6:8.26:8,0,193	0/0:19,0:17:42.03:0,42,1379	0/0:17,0:16:46.03:0,46,1098	0/0:28,0:27:50.80:0,51,1448	1/1:13,10:22:26.78:366,27,0	1/1:15,0:20:44.67:830,45,0	1/1:26,0:26:9.97:583,10,0	1/1:16,0:16:25.84:535,26,0	0/0:10,0:9:25.17:0,25,377	0/0:17,0:16:29.35:0,29,448	0/0:13,0:12:27.09:0,27,674	0/0:24,0:22:36.31:0,36,665	0/0:21,0:19:39.13:0,39,1133	0/0:30,0:29:54.65:0,55,1604	1/1:16,0:15:23.70:328,24,0	0/0:28,0:23:22.94:0,23,685	0/0:18,0:14:24.08:0,24,567	0/1:10,0:9:37.90:38,0,148
chr10	4891010	.	CTCTCTCT	C	1209.33	PASS	AB=0.878;AC=6;AF=0.107;AN=56;BaseQRankSum=9.273;DP=565;FS=12.107;HRun=0;HaplotypeScore=124.1454;InbreedingCoeff=0.3892;MQ=47.75;MQ0=40;MQRankSum=-2.058;QD=11.74;ReadPosRankSum=4.357;VQSLOD=1.2632;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:15:3.01:0,3,89	0/0:6,0:6:12:0,12,160	0/0:33,0:12:23.13:0,23,302	0/0:47,0:12:30.05:0,30,361	0/0:16,0:12:18.06:0,18,249	0/0:14,0:14:32.94:0,33,532	0/0:27,0:25:66.22:0,66,1522	0/0:14,0:13:25.21:0,25,136	0/0:12,0:11:30.53:0,31,661	0/0:27,0:27:74.27:0,74,1751	0/0:7,0:7:16.30:0,16,263	0/0:19,0:17:41.96:0,42,1266	0/0:16,0:16:28.39:0,28,1008	0/0:28,0:27:50.89:0,51,1268	0/1:18,3:20:3.02:133,0,3	1/1:16,4:19:12.40:449,12,0	0/1:23,0:26:43.12:339,0,43	0/1:15,2:16:11.98:271,0,12	0/0:10,0:9:18.95:0,19,297	0/0:17,0:16:27:0,27,388	0/0:13,0:12:27.06:0,27,637	0/0:24,0:22:35.72:0,36,608	0/0:22,0:20:39.13:0,39,1003	0/0:30,0:29:54.65:0,55,1441	0/1:15,2:15:3.11:144,0,3	0/0:28,0:23:51.19:0,51,1053	0/0:19,0:15:27.56:0,28,731	0/0:10,0:9:20.86:0,21,266
chr10	4892921	.	T	TC	722.01	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-4.668;DP=623;FS=2.671;HRun=6;HaplotypeScore=61.0633;InbreedingCoeff=0.9164;MQ=78.03;MQ0=0;MQRankSum=-2.411;QD=25.79;ReadPosRankSum=-3.675;VQSLOD=2.0672;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,132,1346	0/0:14,0:14:42.10:0,42,428	0/0:15,0:16:9.15:0,9,322	0/0:12,0:12:24.94:0,25,201	0/0:25,0:25:69.16:0,69,704	0/0:19,0:19:54.08:0,54,540	0/0:30,0:30:84.19:0,84,857	1/1:3,24:28:69.15:817,69,0	0/0:12,0:12:24.05:0,24,245	0/0:18,0:18:54.12:0,54,551	0/0:15,0:15:42.09:0,42,428	0/0:21,0:21:57.13:0,57,581	0/0:23,0:23:66.15:0,66,673	0/0:17,0:17:42.09:0,42,428	0/0:26,0:26:72.16:0,72,735	0/0:19,0:19:57.12:0,57,575	0/0:37,0:37:99:0,105,1061	0/0:22,0:22:66.15:0,66,672	0/0:29,0:29:60.12:0,60,611	0/0:20,0:20:57.13:0,57,581	0/0:26,0:26:66.12:0,66,660	0/0:27,0:27:75.16:0,75,762	0/0:16,0:16:45.10:0,45,458	0/0:28,0:28:78.18:0,78,795	0/0:26,0:26:75.17:0,75,765	0/0:26,0:26:66.14:0,66,668	0/0:21,0:21:57.13:0,57,581	0/0:5,0:5:12.03:0,12,122
chr10	4893542	.	A	AAG	1240.54	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=1.651;DP=608;FS=5.036;HRun=0;HaplotypeScore=97.8282;InbreedingCoeff=0.7858;MQ=60.65;MQ0=12;MQRankSum=3.168;QD=14.95;ReadPosRankSum=3.843;VQSLOD=3.1678;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:49,0:49:75.84:265,76,0	0/0:9,0:9:22.17:0,22,205	0/0:34,0:11:25.61:0,26,171	0/0:22,0:8:16.76:0,17,122	0/0:34,0:33:90.77:0,91,957	0/0:17,0:17:39:0,39,452	0/0:14,0:14:39.47:0,39,369	1/1:4,30:33:86.98:1096,87,0	0/0:14,0:14:35.91:0,36,383	0/0:21,0:21:53.81:0,54,554	0/0:24,0:24:61.25:0,61,670	0/0:15,0:15:43.59:0,44,508	0/0:18,0:18:45:0,45,519	0/0:29,0:28:67.67:0,68,702	0/0:10,0:10:10.24:0,10,109	0/0:6,0:6:9.21:0,9,60	0/0:16,0:16:15.98:0,16,151	0/0:15,0:15:20.28:0,20,139	0/0:24,0:22:60.04:0,60,644	0/0:22,0:22:51.75:0,52,572	0/0:8,0:8:18.02:0,18,192	0/0:26,0:26:77.84:0,78,767	0/0:27,0:27:79.78:0,80,846	0/0:23,0:23:55.37:0,55,623	0/0:24,0:24:62.15:0,62,372	0/0:30,0:30:50.35:0,50,442	0/0:32,0:32:0.65:0,1,266	0/0:11,0:10:5.14:0,5,131
chr10	4893543	.	A	AG	1285.42	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-4.581;DP=607;FS=0.000;HRun=0;HaplotypeScore=85.9584;InbreedingCoeff=0.8986;MQ=60.45;MQ0=13;MQRankSum=2.640;QD=15.68;ReadPosRankSum=4.538;VQSLOD=5.6059;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,48:48:96.29:1144,96,0	0/0:9,0:9:20.78:0,21,188	0/0:35,0:11:27.53:0,28,199	0/0:21,0:7:10.85:0,11,100	0/0:34,0:33:88.81:0,89,902	0/0:17,0:17:37.29:0,37,416	0/0:14,0:14:39.43:0,39,345	1/1:34,0:33:4.98:253,5,0	0/0:12,0:12:34.19:0,34,350	0/0:21,0:21:53.86:0,54,544	0/0:24,0:24:64.97:0,65,678	0/0:16,0:16:43.17:0,43,478	0/0:18,0:18:42.58:0,43,488	0/0:29,0:28:68.59:0,69,672	0/0:10,0:10:29.31:0,29,217	0/0:6,0:6:17.07:0,17,120	0/0:17,0:17:29.87:0,30,206	0/0:15,0:14:34.82:0,35,237	0/0:24,0:22:63.53:0,64,643	0/0:21,0:21:61.72:0,62,591	0/0:8,0:8:18.02:0,18,190	0/0:26,0:26:76.13:0,76,741	0/0:27,0:27:78.11:0,78,834	0/0:23,0:23:55.90:0,56,597	0/0:24,0:24:70.14:0,70,501	0/0:31,0:31:75.90:0,76,545	0/0:32,0:32:52.74:0,53,425	0/0:11,0:10:28.13:0,28,237
chr10	4894145	.	G	GTGAA	5315.34	PASS	AB=0.630;AC=9;AF=0.161;AN=56;BaseQRankSum=4.928;DP=778;FS=1.516;HRun=0;HaplotypeScore=133.0099;InbreedingCoeff=0.8350;MQ=69.32;MQ0=0;MQRankSum=1.424;QD=34.97;ReadPosRankSum=1.901;VQSLOD=4.7352;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:60,0:61:99:0,153,2420	0/0:18,0:18:39.13:0,39,609	0/0:23,0:20:27.05:0,27,384	0/0:16,0:16:12.02:0,12,135	0/0:20,0:20:42.14:0,42,688	0/0:21,0:21:48.15:0,48,759	0/0:28,0:28:57.19:0,57,926	0/0:26,0:26:36.03:0,36,467	0/0:26,0:26:51.17:0,51,835	0/0:31,0:31:78.24:0,78,1206	0/0:20,0:20:39.13:0,39,635	0/0:23,0:23:57.19:0,57,923	0/0:35,0:35:69.21:0,69,1087	0/0:31,0:31:69.22:0,69,1100	1/1:9,21:30:54.19:1317,54,0	1/1:7,24:31:48.06:1170,48,0	1/1:9,21:30:6.87:1196,7,0	0/1:14,20:34:47.27:836,0,47	0/0:26,0:25:39.09:0,39,561	0/0:17,0:17:30.09:0,30,454	0/0:49,0:49:99:0,114,1840	0/0:26,0:26:60.18:0,60,941	0/0:23,0:23:48.13:0,48,735	0/0:31,0:31:78.25:0,78,1242	1/1:13,12:27:33.11:797,33,0	0/0:28,0:28:54.15:0,54,810	0/0:33,0:33:78.15:0,78,1189	0/0:14,0:14:32.98:0,33,506
chr10	4899367	.	C	CTT	5536.12	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-13.814;DP=668;FS=0.407;HRun=1;HaplotypeScore=79.8320;InbreedingCoeff=0.9999;MQ=83.27;MQ0=0;MQRankSum=-1.530;QD=49.87;ReadPosRankSum=4.650;VQSLOD=4.8149;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:62,0:62:99:0,180,2804	0/0:11,0:11:33.08:0,33,507	0/0:29,0:29:74.39:0,74,1145	0/0:22,0:22:60.18:0,60,861	0/0:17,0:17:48.06:0,48,697	0/0:25,0:24:64.95:0,65,1105	0/0:23,0:23:69.15:0,69,1041	0/0:29,0:29:87.12:0,87,1275	0/0:26,0:26:75.17:0,75,1158	0/0:24,0:24:66.15:0,66,993	0/0:18,0:18:47.95:0,48,609	0/0:23,0:23:69.12:0,69,950	0/0:19,0:19:54.17:0,54,851	0/0:21,0:21:63.15:0,63,965	1/1:1,17:18:42.14:852,42,0	1/1:0,21:21:51.18:1035,51,0	1/1:0,34:34:84.29:1703,84,0	1/1:0,18:18:51.18:1032,51,0	0/0:22,0:22:56.03:0,56,768	0/0:23,0:23:69.21:0,69,1067	0/0:21,0:21:57.19:0,57,925	0/0:18,0:18:51.16:0,51,801	0/0:23,0:23:63:0,63,957	0/0:26,0:26:78.24:0,78,1215	1/1:1,19:20:45.15:913,45,0	0/0:26,0:26:75.25:0,75,1196	0/0:32,0:32:96.22:0,96,1406	0/0:17,0:17:42.03:0,42,622
chr10	4901377	.	TGTTTGTTTG	T	954.16	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.336;DP=778;FS=3.114;HRun=0;HaplotypeScore=198.1500;InbreedingCoeff=0.9996;MQ=59.58;MQ0=10;MQRankSum=-6.492;QD=21.69;ReadPosRankSum=0.454;VQSLOD=2.9783;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:8,20:39:51.04:1049,51,0	0/0:21,0:21:63.21:0,63,2586	0/0:22,0:13:32.67:0,33,940	0/0:33,0:23:54.40:0,54,1609	0/0:35,0:35:99:0,105,4376	0/0:21,0:21:63.19:0,63,2656	0/0:18,0:18:54.18:0,54,2413	0/0:46,0:46:99:0,135,4074	0/0:20,0:20:60.19:0,60,2195	0/0:38,0:38:99:0,114,4671	0/0:39,0:39:99:0,117,4785	0/0:25,0:25:72.23:0,72,2789	0/0:29,0:29:87.25:0,87,3356	0/0:13,0:14:39.13:0,39,1498	0/0:26,0:25:75.18:0,75,2742	0/0:19,0:19:57.17:0,57,2264	0/0:36,0:36:99:0,108,4545	0/0:31,0:31:93.32:0,93,3714	0/0:25,0:25:75.24:0,75,2602	0/0:32,0:32:90.28:0,90,3484	0/0:23,0:23:69.15:0,69,2790	0/0:24,0:24:72.25:0,72,3076	0/0:19,0:19:57.18:0,57,2305	0/0:28,0:28:81.24:0,81,3298	0/0:27,0:27:81.26:0,81,3258	0/0:37,0:37:99:0,111,4666	0/0:28,0:28:84.29:0,84,3155	0/0:18,0:18:54.16:0,54,1629
chr10	4901381	.	TGTTTGTTTG	T	940.36	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.160;DP=782;FS=0.924;HRun=0;HaplotypeScore=199.6920;InbreedingCoeff=0.9996;MQ=57.73;MQ0=10;MQRankSum=-7.139;QD=22.39;ReadPosRankSum=1.451;VQSLOD=3.1763;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:27,10:37:51.03:1035,51,0	0/0:21,0:21:63.22:0,63,2675	0/0:17,0:11:32.14:0,32,1030	0/0:33,0:25:69.05:0,69,1959	0/0:35,0:35:99:0,105,4611	0/0:19,0:19:57.20:0,57,2677	0/0:19,0:19:57.20:0,57,2560	0/0:42,0:42:99:0,123,4160	0/0:19,0:19:57.19:0,57,2273	0/0:39,0:39:99:0,117,4955	0/0:41,0:41:99:0,120,5056	0/0:25,0:25:75.24:0,75,2965	0/0:28,0:28:84.25:0,84,3493	0/0:14,0:14:39.13:0,39,1561	0/0:27,0:26:78.25:0,78,3024	0/0:22,0:22:66.23:0,66,2626	0/0:37,0:37:99:0,111,4793	0/0:33,0:33:95.03:0,95,3928	0/0:24,0:24:72.22:0,72,2674	0/0:31,0:31:90.29:0,90,3701	0/0:23,0:23:66.23:0,66,2903	0/0:24,0:24:72.25:0,72,3165	0/0:22,0:22:66.23:0,66,2643	0/0:28,0:29:84.24:0,84,3484	0/0:28,0:28:84.27:0,84,3466	0/0:38,0:38:99:0,114,4906	0/0:31,0:31:93.32:0,93,3545	0/0:18,0:18:54.16:0,54,1699
chr10	4906218	.	GGCT	G	786.11	PASS	AB=0.893;AC=9;AF=0.281;AN=32;BaseQRankSum=6.650;DP=479;FS=5.492;HRun=0;HaplotypeScore=76.8314;InbreedingCoeff=0.6811;MQ=70.65;MQ0=2;MQRankSum=-0.506;QD=5.91;ReadPosRankSum=0.066;VQSLOD=1.8273;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	0/0:4,0:3:3.01:0,3,58	./.	./.	./.	./.	0/0:34,1:35:20.26:0,20,1015	0/0:14,0:14:3:0,3,27	0/0:26,1:27:11.22:0,11,815	./.	./.	0/1:22,3:25:0.81:1,0,625	0/0:23,0:23:36.12:0,36,649	0/0:34,0:34:63.18:0,63,1109	1/1:16,0:16:21:184,21,0	1/1:32,0:32:13.80:278,14,0	0/0:24,0:24:33.10:0,33,397	1/1:26,0:26:47.99:422,48,0	./.	./.	1/1:34,0:34:3:25,3,0	./.	./.	0/0:41,1:42:56.39:0,56,1732	./.	0/0:8,0:7:0:0,0,0	0/0:14,0:14:20:0,20,331	0/0:8,0:8:6.89:0,7,82
chr10	4906230	.	T	TGCC	663.52	PASS	AC=2;AF=0.037;AN=54;BaseQRankSum=-3.951;DP=473;FS=1.041;HRun=0;HaplotypeScore=77.0008;InbreedingCoeff=0.5820;MQ=64.68;MQ0=18;MQRankSum=-0.138;QD=27.65;ReadPosRankSum=2.021;VQSLOD=3.8728;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:16:32.95:0,33,272	0/0:5,0:4:8.99:0,9,98	0/0:17,0:10:16.29:0,16,215	0/0:17,0:12:10.78:0,11,116	0/0:2,0:1:2.99:0,3,24	0/0:13,0:12:32.95:0,33,272	0/0:35,0:35:99:0,102,1344	0/0:13,0:11:33.01:0,33,301	0/0:25,0:25:75.10:0,75,998	0/0:7,0:7:11.95:0,12,109	0/0:2,0:2:5.99:0,6,50	0/0:26,0:26:69.09:0,69,890	0/0:23,0:23:63:0,63,827	0/0:34,0:34:93.13:0,93,1205	0/0:15,0:15:38.93:0,39,418	0/0:32,0:32:72.08:0,72,767	1/1:0,23:24:33.11:757,33,0	0/0:32,0:32:63.10:0,63,732	0/0:9,0:6:11.86:0,12,91	0/0:2,0:2:5.99:0,6,50	0/0:31,0:27:56.90:0,57,470	0/0:7,0:7:11.93:0,12,93	./.	0/0:40,0:40:99:0,117,1747	0/0:7,0:6:11.89:0,12,84	0/0:7,0:6:9.45:0,9,77	0/0:17,0:17:50.67:0,51,513	0/0:10,0:10:29.92:0,30,255
chr10	4906258	.	GCTA	G	2417.97	PASS	AB=1.000;AC=14;AF=0.250;AN=56;BaseQRankSum=4.763;DP=516;FS=4.219;HRun=0;HaplotypeScore=69.3540;InbreedingCoeff=0.7643;MQ=69.42;MQ0=9;MQRankSum=-1.591;QD=18.60;ReadPosRankSum=0.935;VQSLOD=3.2672;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:10,0:10:26.95:221,27,0	0/0:6,0:6:14.97:0,15,164	0/0:22,0:13:25.84:0,26,249	0/0:23,0:18:43.44:0,43,369	0/0:7,0:7:14.88:0,15,112	0/0:15,0:14:35.89:0,36,292	0/0:39,0:39:99:0,102,1505	0/0:20,0:18:46:0,46,382	0/0:27,0:27:65.94:0,66,1155	0/0:15,0:15:32.73:0,33,324	0/0:2,0:2:5.99:0,6,50	0/0:29,0:29:65.84:0,66,992	0/0:23,0:23:66.01:0,66,894	0/0:35,0:35:99:0,99,1545	1/1:0,16:16:21.07:358,21,0	1/1:2,27:29:36.12:591,36,0	0/0:28,0:28:63.05:0,63,867	1/1:0,35:35:48.16:804,48,0	0/0:12,0:11:27.08:0,27,238	0/0:4,0:4:11.96:0,12,95	0/0:29,0:29:53.78:0,54,424	0/0:10,0:10:20.84:0,21,161	0/0:3,0:3:8.96:0,9,69	0/0:37,0:37:96.18:0,96,2157	1/1:5,0:5:11.54:92,12,0	1/1:11,0:11:21.31:251,21,0	0/1:18,0:17:99:231,0,110	0/1:6,0:6:18.57:60,0,19
chr10	4909980	.	GAAA	G	465.58	PASS	AC=2;AF=0.043;AN=46;BaseQRankSum=1.294;DP=381;FS=4.949;HRun=14;HaplotypeScore=65.2207;InbreedingCoeff=0.7042;MQ=59.44;MQ0=36;MQRankSum=0.315;QD=16.63;ReadPosRankSum=3.336;VQSLOD=2.4444;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,25:27:46.64:558,47,0	0/0:5,0:4:6.02:0,6,103	0/0:30,0:8:17.78:0,18,147	0/0:19,0:6:14.88:0,15,134	0/0:22,0:20:39.55:0,40,654	0/0:20,0:21:42.10:0,42,721	0/0:17,0:16:38.96:0,39,587	0/0:8,0:21:40.58:0,41,416	0/0:11,0:10:24.08:0,24,444	0/0:20,0:21:48:0,48,554	0/0:10,0:9:15.49:0,15,220	0/0:11,0:12:24:0,24,302	0/0:15,0:15:27.02:0,27,435	0/0:21,0:19:54.07:0,54,878	./.	./.	./.	./.	0/0:15,1:18:10.11:0,10,582	0/0:7,0:10:29.90:0,30,354	0/0:10,0:10:18.02:0,18,279	0/0:1,0:1:2.84:0,3,14	0/0:6,0:7:12.04:0,12,225	0/0:7,0:9:24:0,24,328	./.	0/0:19,0:21:57.42:0,57,832	0/0:16,0:14:30.06:0,30,497	0/0:18,0:17:45.11:0,45,766
chr10	4911529	.	T	TACACAC	2354.08	PASS	AB=1.000;AC=23;AF=0.460;AN=50;BaseQRankSum=3.278;DP=538;FS=2.353;HRun=0;HaplotypeScore=128.6388;InbreedingCoeff=0.6149;MQ=62.58;MQ0=9;MQRankSum=-5.150;QD=9.65;ReadPosRankSum=-3.586;VQSLOD=1.7202;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:19,0:19:0.80:210,0,1	0/0:9,0:9:6.02:0,6,121	./.	./.	0/0:17,0:17:15.04:0,15,262	0/0:18,0:19:18.06:0,18,345	0/0:23,0:25:12.92:0,13,235	1/1:29,0:29:13.58:146,14,0	0/0:15,0:15:9.03:0,9,181	1/1:23,0:23:3.87:24,4,0	0/0:18,0:19:27.96:0,28,493	0/0:12,0:13:9.02:0,9,153	0/0:12,0:11:9.03:0,9,182	0/0:17,0:17:24.06:0,24,419	1/1:19,0:19:9.03:261,9,0	0/1:14,0:14:54.60:72,0,55	1/1:15,5:20:12.04:270,12,0	1/1:21,0:21:9.03:230,9,0	0/0:10,0:10:9.03:0,9,162	0/1:18,0:19:11.88:12,0,323	./.	0/0:17,0:18:15.10:0,15,331	1/1:11,0:11:2.99:23,3,0	0/0:29,0:29:36.03:0,36,597	1/1:21,0:21:7.26:173,7,0	1/1:23,0:23:40.02:837,40,0	1/1:20,0:20:11.07:200,11,0	1/1:3,0:3:3.01:78,3,0
chr10	4911569	.	C	CACACAG	3102.43	PASS	AB=0.884;AC=18;AF=0.321;AN=56;BaseQRankSum=5.648;DP=600;FS=1.505;HRun=0;HaplotypeScore=131.8815;InbreedingCoeff=0.6146;MQ=69.00;MQ0=5;MQRankSum=-6.752;QD=11.98;ReadPosRankSum=-3.672;VQSLOD=1.8505;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:27:60.43:617,60,0	0/0:7,0:7:21:0,21,272	0/0:31,0:20:25.09:0,25,280	0/0:22,0:10:3.15:0,3,95	0/0:16,0:16:44.98:0,45,544	0/0:14,0:14:33.03:0,33,543	0/0:27,0:27:68.84:0,69,756	0/1:30,0:30:25.54:26,0,479	0/0:19,0:19:53.93:0,54,582	0/0:22,0:22:25:0,25,391	0/0:19,0:19:50.92:0,51,769	0/0:18,0:18:50.92:0,51,517	0/0:8,0:8:24:0,24,341	0/0:21,0:21:57.04:0,57,801	1/1:2,19:26:8.88:306,9,0	0/1:3,1:22:66.47:85,0,66	0/1:30,0:29:99:197,0,334	1/1:1,20:27:11.78:306,12,0	0/0:19,0:20:41.69:0,42,487	0/0:23,0:23:27.06:0,27,707	0/0:20,0:18:47.90:0,48,388	0/0:19,0:19:45.41:0,45,684	0/1:5,0:5:7.97:8,0,85	0/0:35,0:35:86.94:0,87,1160	1/1:4,20:29:7.27:202,7,0	1/1:27,0:27:20.24:981,20,0	1/1:11,0:25:20.35:349,20,0	1/1:2,0:9:9.03:218,9,0
chr10	4912302	.	CT	C	6517.87	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=19.589;DP=654;FS=3.984;HRun=1;HaplotypeScore=114.1575;InbreedingCoeff=0.9979;MQ=88.29;MQ0=1;MQRankSum=-3.551;QD=29.36;ReadPosRankSum=5.010;VQSLOD=4.6642;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,37:40:99:1159,114,0	0/0:10,0:10:30.10:0,30,477	0/0:20,0:20:57.16:0,57,842	0/0:28,0:28:81.14:0,81,1179	0/0:25,0:25:75.26:0,75,1198	0/0:19,0:17:51.17:0,51,812	0/0:29,0:29:87.28:0,87,1367	0/0:29,0:29:87.29:0,87,1368	0/0:19,0:19:57.19:0,57,911	0/0:28,0:28:81.27:0,81,1274	0/0:16,0:16:48.16:0,48,767	0/0:21,0:21:63.19:0,63,961	0/0:21,0:21:63.20:0,63,983	0/0:34,0:34:99:0,102,1607	1/1:1,22:23:65.92:682,66,0	1/1:6,26:32:16.05:860,16,0	1/1:1,17:18:47.99:490,48,0	1/1:1,28:29:84.17:915,84,0	0/0:29,0:29:87.30:0,87,1387	0/0:24,0:24:72.24:0,72,1134	0/0:26,0:26:78.27:0,78,1247	0/0:16,0:16:48.16:0,48,767	0/0:13,0:13:36.12:0,36,575	0/0:25,0:25:75.26:0,75,1199	1/1:3,19:22:45.56:607,46,0	1/1:0,18:20:59.63:641,60,0	1/1:3,19:21:52.62:641,53,0	1/1:0,16:16:48.11:522,48,0
chr10	4912305	.	T	TAG	11258.56	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=19.587;DP=662;FS=9.301;HRun=0;HaplotypeScore=115.5263;InbreedingCoeff=0.9999;MQ=84.69;MQ0=1;MQRankSum=-3.739;QD=48.11;ReadPosRankSum=2.894;VQSLOD=5.3944;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,37:42:99:1943,120,0	0/0:10,0:10:30.10:0,30,486	0/0:18,0:18:47.98:0,48,719	0/0:24,0:24:66.19:0,66,1007	0/0:25,0:25:75.26:0,75,1218	0/0:20,0:18:54.18:0,54,874	0/0:29,0:29:87.30:0,87,1410	0/0:32,0:32:90.28:0,90,1418	0/0:19,0:19:57.19:0,57,930	0/0:26,0:26:78.27:0,78,1272	0/0:16,0:16:48.16:0,48,783	0/0:21,0:21:60.20:0,60,976	0/0:21,0:21:63.22:0,63,1025	0/0:33,0:33:99:0,99,1585	1/1:3,22:25:72.24:1203,72,0	1/1:5,26:31:44.37:1481,44,0	1/1:2,17:19:51.17:843,51,0	1/1:2,28:30:90.26:1509,90,0	0/0:28,0:28:84.29:0,84,1364	0/0:22,0:22:66.21:0,66,1053	0/0:27,0:27:81.26:0,81,1294	0/0:17,0:17:51.16:0,51,806	0/0:14,0:14:39.10:0,39,585	0/0:26,0:26:75.26:0,75,1221	1/1:3,19:22:66.22:1095,66,0	1/1:6,18:24:69.23:1165,69,0	1/1:3,19:21:66.23:1120,66,0	1/1:3,16:19:57.15:899,57,0
chr10	4912813	.	T	TC	735.29	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-6.777;DP=670;FS=5.735;HRun=1;HaplotypeScore=94.2841;InbreedingCoeff=0.9990;MQ=79.23;MQ0=0;MQRankSum=0.341;QD=31.97;ReadPosRankSum=-3.345;VQSLOD=2.2357;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,120,1501	0/0:14,0:14:39.13:0,39,504	0/0:17,0:17:47.81:0,48,562	0/0:14,0:14:39.10:0,39,480	0/0:18,0:18:45.07:0,45,535	0/0:18,0:18:54.18:0,54,698	0/0:24,0:24:66.21:0,66,854	1/1:1,22:23:63.15:830,63,0	0/0:23,0:23:66.21:0,66,854	0/0:23,0:23:63.02:0,63,769	0/0:16,0:16:48.14:0,48,586	0/0:29,0:29:84.26:0,84,1069	0/0:23,0:23:69.19:0,69,851	0/0:44,0:44:99:0,132,1684	0/0:31,0:31:90.27:0,90,1140	0/0:24,0:24:69.22:0,69,893	0/0:34,0:34:99:0,102,1275	0/0:30,0:30:90.24:0,90,1123	0/0:14,0:14:32.75:0,33,383	0/0:15,0:15:45.15:0,45,582	0/0:54,0:54:99:0,150,1876	0/0:18,0:18:48.15:0,48,610	0/0:10,0:10:30.10:0,30,386	0/0:27,0:27:75.24:0,75,963	0/0:17,0:17:51.16:0,51,647	0/0:30,0:30:90.24:0,90,1102	0/0:21,0:21:59.96:0,60,762	0/0:17,0:17:51.12:0,51,640
chr10	4913735	.	CAAA	C	2618.80	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=14.402;DP=726;FS=1.972;HRun=4;HaplotypeScore=148.7014;InbreedingCoeff=0.9997;MQ=78.69;MQ0=0;MQRankSum=-12.509;QD=27.28;ReadPosRankSum=2.697;VQSLOD=0.6653;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,27:34:75.17:909,75,0	0/0:10,0:10:27.09:0,27,596	0/0:26,0:26:57.87:0,58,1289	0/0:26,0:26:37.17:0,37,1419	0/0:29,0:29:87.28:0,87,1961	0/0:22,0:22:66.16:0,66,1420	0/0:23,0:23:69.24:0,69,1632	0/0:25,0:25:75.26:0,75,1776	0/0:21,0:21:63.20:0,63,1402	0/0:34,0:34:99:0,99,2120	0/0:23,0:23:69.24:0,69,1632	0/0:29,0:29:87.26:0,87,1981	0/0:30,0:30:90.30:0,90,2039	0/0:33,0:33:99:0,99,2255	0/0:31,0:31:93.31:0,93,2092	0/0:30,0:30:90.30:0,90,2045	0/0:28,0:28:84.22:0,84,1837	0/0:16,0:16:48.11:0,48,1038	0/0:18,0:18:54.17:0,54,1172	0/0:22,0:22:66.23:0,66,1540	0/0:45,0:45:99:0,129,2789	0/0:33,0:33:99:0,99,2188	0/0:27,0:27:81.27:0,81,1857	0/0:22,0:22:66.20:0,66,1378	0/0:27,0:27:78.26:0,78,1786	1/1:7,20:27:75.16:879,75,0	1/1:7,15:22:45.14:559,45,0	1/1:3,9:13:39.03:433,39,0
chr10	4913740	.	CAACAAGG	C	3527.37	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=13.818;DP=702;FS=2.092;HRun=0;HaplotypeScore=199.4385;InbreedingCoeff=0.9992;MQ=77.70;MQ0=0;MQRankSum=-13.320;QD=48.99;ReadPosRankSum=4.578;VQSLOD=3.7769;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,27:27:75.15:1230,75,0	0/0:11,0:11:30.10:0,30,1259	0/0:24,0:24:24.67:0,25,2311	0/0:24,0:24:72.25:0,72,2754	0/0:29,0:29:87.30:0,87,3570	0/0:21,0:21:63.17:0,63,2364	0/0:24,0:24:72.25:0,72,2960	0/0:29,0:29:87.30:0,87,3552	0/0:23,0:23:69.22:0,69,2719	0/0:33,0:33:99:0,99,3845	0/0:24,0:24:72.25:0,72,2998	0/0:29,0:29:87.30:0,87,3453	0/0:30,0:30:90.31:0,90,3665	0/0:32,0:32:96.33:0,96,3838	0/0:32,0:32:96.33:0,96,3745	0/0:30,0:30:90.31:0,90,3621	0/0:29,0:29:87.25:0,87,3273	0/0:15,0:15:45.15:0,45,1888	0/0:20,0:20:60.20:0,60,2303	0/0:23,0:23:69.24:0,69,2760	0/0:43,0:43:99:0,126,5107	0/0:32,0:32:96.33:0,96,3859	0/0:27,0:27:81.28:0,81,3308	0/0:21,0:21:63.22:0,63,2347	0/0:25,0:25:75.26:0,75,3060	1/1:0,20:20:60.21:1041,60,0	1/1:0,15:15:45.15:761,45,0	1/1:1,9:10:30.10:495,30,0
chr10	4913748	.	TGG	T	1949.36	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=13.818;DP=692;FS=0.945;HRun=2;HaplotypeScore=130.3412;InbreedingCoeff=0.9997;MQ=77.37;MQ0=1;MQRankSum=-12.815;QD=25.99;ReadPosRankSum=3.866;VQSLOD=2.9116;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,27:27:72.11:694,72,0	0/0:10,0:10:30.10:0,30,610	0/0:22,0:22:63.68:0,64,1200	0/0:23,0:23:69.24:0,69,1378	0/0:30,0:30:90.29:0,90,1781	0/0:17,0:17:51.18:0,51,1036	0/0:29,0:29:87.30:0,87,1768	0/0:31,0:31:93.31:0,93,1849	0/0:22,0:22:66.23:0,66,1341	0/0:29,0:29:87.30:0,87,1768	0/0:24,0:24:72.23:0,72,1425	0/0:28,0:28:84.29:0,84,1696	0/0:32,0:32:96.32:0,96,1908	0/0:29,0:29:87.30:0,87,1741	0/0:29,0:29:87.28:0,87,1728	0/0:28,0:28:84.27:0,84,1649	0/0:25,0:25:75.26:0,75,1524	0/0:17,0:17:51.15:0,51,998	0/0:19,0:19:57.18:0,57,1121	0/0:21,0:21:63.22:0,63,1276	0/0:46,0:46:99:0,135,2614	0/0:35,0:35:99:0,105,2132	0/0:28,0:28:84.29:0,84,1706	0/0:19,0:19:57.20:0,57,1142	0/0:23,0:23:69.24:0,69,1379	1/1:0,22:22:66.12:676,66,0	1/1:1,15:16:48.06:457,48,0	1/1:0,10:10:29.73:283,30,0
chr10	4919438	.	ATGATGT	A	4402.78	PASS	AB=0.553;AC=7;AF=0.125;AN=56;BaseQRankSum=12.169;DP=695;FS=0.984;HRun=0;HaplotypeScore=142.5437;InbreedingCoeff=0.8362;MQ=77.66;MQ0=0;MQRankSum=-12.590;QD=48.38;ReadPosRankSum=3.068;VQSLOD=5.1281;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,18:24:39.13:795,39,0	0/0:9,0:9:27.09:0,27,848	0/0:17,0:17:39.09:0,39,1003	0/0:16,0:16:39.05:0,39,1149	0/0:29,0:29:75.26:0,75,2543	0/0:24,0:24:63.20:0,63,2018	0/0:22,0:22:57.14:0,57,1806	0/0:48,0:48:99:0,114,3551	0/0:19,0:19:57.20:0,57,1918	0/0:24,0:24:69.24:0,69,2363	0/0:22,0:22:63.21:0,63,2038	0/0:34,0:34:96.32:0,96,3101	0/0:31,0:31:90.31:0,90,2965	0/0:22,0:22:63.20:0,63,2017	0/0:43,0:43:99:0,123,4206	0/0:39,0:38:99:0,108,3663	0/0:33,0:33:93.32:0,93,3043	0/0:31,0:31:84.29:0,84,2870	0/0:27,0:27:66.23:0,66,2112	0/0:25,0:25:66.23:0,66,2228	0/0:23,0:23:69.24:0,69,2390	0/0:11,0:11:33.11:0,33,1087	0/0:15,0:15:39.13:0,39,1293	0/0:14,0:14:39.13:0,39,1351	0/0:26,0:26:72.25:0,72,2437	0/1:5,21:26:37.76:1333,0,38	1/1:3,26:29:69.24:1534,69,0	1/1:0,12:12:33.11:741,33,0
chr10	4919833	.	G	GT	1292.73	PASS	AB=0.894;AC=26;AF=0.481;AN=54;BaseQRankSum=-1.431;DP=436;FS=1.996;HRun=15;HaplotypeScore=63.1934;InbreedingCoeff=-0.0957;MQ=71.30;MQ0=3;MQRankSum=-2.419;QD=3.62;ReadPosRankSum=-3.822;VQSLOD=-0.4080;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,15:27:3.66:118,4,0	0/1:3,1:4:12.02:19,0,12	0/0:10,0:4:1.86:0,2,16	0/1:14,0:16:3.18:3,0,3	0/1:15,1:21:23.48:23,0,97	0/0:15,0:17:6.57:0,7,112	0/0:13,0:14:8.43:0,8,56	0/1:28,3:31:41.56:42,0,96	0/0:8,0:8:8.67:0,9,54	0/1:13,3:16:52.09:52,0,66	0/1:12,0:12:14.05:14,0,27	0/1:16,0:16:9.04:33,0,9	0/1:12,0:12:8.28:8,0,56	0/0:11,0:11:5.38:0,5,48	1/1:12,5:17:21.40:168,21,0	1/1:16,6:22:40.36:305,40,0	0/1:22,2:24:21.39:21,0,84	0/1:10,6:15:34.35:34,0,41	0/1:16,3:20:32.19:32,0,60	0/1:24,1:26:34.44:34,0,59	0/1:8,0:8:9.32:9,0,44	0/0:5,0:6:4.81:0,5,24	0/0:11,0:11:8.50:0,8,52	./.	0/1:10,3:16:3.23:67,0,3	1/1:6,14:20:41.73:313,42,0	1/1:9,6:14:3:25,3,0	1/1:10,4:15:17.75:132,18,0
chr10	4923236	.	T	TG	10594.36	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-17.231;DP=793;FS=3.697;HRun=0;HaplotypeScore=73.7571;InbreedingCoeff=0.9996;MQ=83.16;MQ0=0;MQRankSum=-1.326;QD=44.51;ReadPosRankSum=3.004;VQSLOD=5.4080;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,44:44:99:2012,126,0	0/0:9,0:9:27.09:0,27,377	0/0:22,0:22:59.58:0,60,752	0/0:28,0:27:46.19:0,46,957	0/0:14,0:14:42.14:0,42,586	0/0:23,0:23:69.23:0,69,964	0/0:29,0:29:87.25:0,87,1164	0/0:18,0:18:54.17:0,54,740	0/0:26,0:26:78.24:0,78,1058	0/0:36,0:36:99:0,108,1477	0/0:11,0:11:30.09:0,30,402	0/0:46,0:46:99:0,135,1805	0/0:35,0:35:99:0,102,1408	0/0:32,0:32:96.28:0,96,1290	1/1:0,31:31:87.30:1389,87,0	1/1:1,32:33:96.33:1533,96,0	0/0:45,0:45:99:0,135,1876	1/1:0,44:44:99:1965,123,0	0/0:22,0:22:63.21:0,63,879	0/0:19,0:19:57.10:0,57,741	0/0:65,0:65:99:0,193,2626	0/0:15,0:15:45.12:0,45,593	0/0:15,0:15:45.15:0,45,629	0/0:45,0:45:99:0,132,1821	1/1:1,33:34:93.32:1486,93,0	1/1:1,24:25:33.31:1107,33,0	1/1:0,17:17:39.13:623,39,0	1/1:0,10:10:30.10:479,30,0
chr10	4924666	.	TGAG	T	6901.73	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=18.634;DP=678;FS=4.219;HRun=0;HaplotypeScore=127.8921;InbreedingCoeff=0.9984;MQ=73.01;MQ0=1;MQRankSum=-6.601;QD=34.17;ReadPosRankSum=2.722;VQSLOD=5.2416;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,31:36:74.46:967,74,0	0/0:8,0:8:24.08:0,24,566	0/0:16,0:15:39.09:0,39,717	0/0:10,0:10:21.50:0,21,369	0/0:25,0:25:75.26:0,75,1774	0/0:22,0:22:66.23:0,66,1560	0/0:26,0:26:78.25:0,78,1775	0/0:25,0:25:75.26:0,75,1748	0/0:29,0:29:87.28:0,87,2010	0/0:30,0:30:90.31:0,90,2110	0/0:22,0:22:66.23:0,66,1538	0/0:32,0:32:96.32:0,96,2204	0/0:26,0:26:78.25:0,78,1744	0/0:25,0:25:75.26:0,75,1768	1/1:8,19:27:71.38:890,71,0	1/1:2,22:24:66.21:890,66,0	0/0:32,0:32:96.33:0,96,2222	1/1:6,23:29:61.29:1043,61,0	0/0:17,0:17:51.16:0,51,1160	0/0:16,0:16:48.16:0,48,1113	0/0:41,0:41:99:0,117,2736	0/0:21,0:21:63.22:0,63,1481	0/0:21,0:21:60.21:0,60,1418	0/0:32,0:31:96.31:0,96,2216	1/1:6,18:23:56.36:724,56,0	1/1:4,26:30:87.25:1142,87,0	1/1:2,23:25:72.23:957,72,0	1/1:0,7:7:21.07:289,21,0
chr10	4924667	.	G	GC	1966.26	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=18.852;DP=667;FS=2.716;HRun=0;HaplotypeScore=115.9943;InbreedingCoeff=0.9271;MQ=72.88;MQ0=1;MQRankSum=-6.228;QD=9.83;ReadPosRankSum=2.265;VQSLOD=3.9284;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:31,0:31:64.24:245,64,0	0/0:8,0:8:24.08:0,24,335	0/0:15,0:14:39.07:0,39,487	0/1:10,0:10:7.32:7,0,231	0/0:25,0:25:75.25:0,75,1049	0/0:23,0:23:66.22:0,66,923	0/0:26,0:26:75.25:0,75,1048	0/0:26,0:26:75.24:0,75,1034	0/0:29,0:29:87.28:0,87,1199	0/0:30,0:30:90.29:0,90,1244	0/0:22,0:22:66.21:0,66,905	0/0:32,0:32:96.31:0,96,1325	0/0:26,0:26:78.21:0,78,1037	0/0:26,0:26:75.25:0,75,1048	1/1:23,0:24:59.41:343,59,0	1/1:23,0:23:58.80:276,59,0	0/0:32,0:32:96.29:0,96,1322	1/1:24,4:28:52.56:305,53,0	0/0:17,0:17:51.16:0,51,696	0/0:16,0:16:48.15:0,48,654	0/0:40,0:40:99:0,117,1617	0/0:22,0:22:63.21:0,63,879	0/0:20,0:20:60.20:0,60,839	0/0:32,0:31:96.30:0,96,1323	1/1:23,0:22:51.18:256,51,0	1/1:29,0:29:75.78:368,76,0	1/1:23,2:24:64.04:281,64,0	1/1:7,0:7:19.61:94,20,0
chr10	4924671	.	CA	C	5099.47	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=19.036;DP=660;FS=6.722;HRun=1;HaplotypeScore=104.2478;InbreedingCoeff=0.9914;MQ=71.14;MQ0=1;MQRankSum=-2.430;QD=27.56;ReadPosRankSum=2.331;VQSLOD=4.4448;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,31:31:77.99:689,78,0	0/0:8,0:8:24.08:0,24,369	0/0:11,0:11:18.06:0,18,287	0/0:10,0:10:11.15:0,11,119	0/0:25,0:25:75.26:0,75,1198	0/0:25,0:25:75.24:0,75,1172	0/0:25,0:25:75.26:0,75,1199	0/0:27,0:27:78.25:0,78,1204	0/0:28,0:28:84.27:0,84,1319	0/0:31,0:31:90.30:0,90,1421	0/0:23,0:23:69.24:0,69,1100	0/0:31,0:31:93.30:0,93,1463	0/0:26,0:26:78.27:0,78,1239	0/0:26,0:26:78.27:0,78,1245	1/1:3,19:22:65.58:642,66,0	1/1:0,25:25:69.06:688,69,0	0/0:33,0:33:99:0,99,1583	1/1:4,23:27:78.16:802,78,0	0/0:16,0:16:48.14:0,48,726	0/0:18,0:18:54.17:0,54,836	0/0:39,0:39:99:0,114,1798	0/0:21,0:21:63.21:0,63,1007	0/0:21,0:21:63.21:0,63,1007	0/0:31,0:30:93.27:0,93,1453	1/1:1,19:19:51.04:486,51,0	1/1:0,29:29:87.11:881,87,0	1/1:1,23:24:72.09:700,72,0	1/1:0,7:7:21.04:212,21,0
chr10	4924967	.	AAT	A	5538.02	PASS	AB=0.532;AC=17;AF=0.304;AN=56;BaseQRankSum=14.970;DP=601;FS=0.743;HRun=0;HaplotypeScore=78.8539;InbreedingCoeff=0.8853;MQ=67.93;MQ0=3;MQRankSum=-0.577;QD=24.40;ReadPosRankSum=2.876;VQSLOD=5.2067;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,24:29:39.12:488,39,0	0/0:8,0:8:24.08:0,24,396	0/0:7,0:5:9:0,9,102	0/0:12,0:11:1.88:0,2,56	0/0:24,0:24:51.14:0,51,791	0/0:25,0:25:54.14:0,54,842	0/0:18,0:18:36.11:0,36,533	0/0:34,0:34:71.76:0,72,966	0/0:16,0:16:42.04:0,42,541	0/0:30,0:29:78.21:0,78,1129	0/0:23,0:24:66.19:0,66,1016	0/0:22,0:22:60.15:0,60,892	0/0:23,0:23:60.19:0,60,966	0/0:19,1:20:16.66:0,17,780	1/1:3,29:32:60.02:750,60,0	1/1:3,26:28:63.20:788,63,0	1/1:5,20:24:39.12:488,39,0	1/1:10,19:29:66.12:777,66,0	0/0:18,0:18:27.66:0,28,512	0/0:23,1:24:31.67:0,32,968	0/0:22,0:22:57.18:0,57,910	0/0:20,0:20:42.12:0,42,644	0/0:16,0:16:42.07:0,42,569	0/0:11,0:11:20.40:0,20,255	1/1:1,17:18:42.13:525,42,0	0/1:3,22:25:7.39:672,0,7	1/1:2,21:23:51.16:637,51,0	1/1:3,14:17:33.11:412,33,0
chr10	4925208	.	TA	T	3891.05	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=11.152;DP=700;FS=2.387;HRun=1;HaplotypeScore=66.6016;InbreedingCoeff=0.9998;MQ=76.86;MQ0=0;MQRankSum=0.028;QD=40.53;ReadPosRankSum=2.345;VQSLOD=4.3975;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,34:34:93.31:1297,93,0	0/0:16,0:16:48.15:0,48,742	0/0:17,0:17:48.16:0,48,767	0/0:25,0:25:59.51:0,60,994	0/0:24,0:24:72.22:0,72,1124	0/0:20,0:20:60.19:0,60,929	0/0:23,0:23:69.21:0,69,1074	0/0:34,0:34:99:0,102,1572	0/0:24,0:24:72.20:0,72,1077	0/0:28,0:28:84.27:0,84,1304	0/0:13,0:13:39.11:0,39,596	0/0:30,0:30:90.31:0,90,1432	0/0:35,0:35:99:0,105,1677	0/0:28,0:28:84.29:0,84,1341	0/0:39,0:39:99:0,117,1870	0/0:37,0:37:99:0,111,1768	0/0:25,0:25:75.19:0,75,1118	0/0:14,0:14:36.12:0,36,573	0/0:21,0:21:60.20:0,60,959	0/0:19,0:19:57.16:0,57,870	0/0:46,0:46:99:0,138,2176	0/0:17,0:17:51.17:0,51,814	0/0:20,0:20:60.20:0,60,959	0/0:24,0:24:72.19:0,72,1096	0/0:25,0:25:75.26:0,75,1199	1/1:0,24:24:72.24:1007,72,0	1/1:0,28:28:84.28:1167,84,0	1/1:0,10:10:30.10:419,30,0
chr10	4926988	.	TG	T	1963.21	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=5.184;DP=471;FS=2.778;HRun=9;HaplotypeScore=60.2223;InbreedingCoeff=0.9816;MQ=77.29;MQ0=0;MQRankSum=-0.431;QD=19.25;ReadPosRankSum=2.310;VQSLOD=4.1646;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,1:23:32.71:0,33,630	0/0:13,0:13:39.08:0,39,427	0/0:9,0:8:18.05:0,18,206	0/0:20,1:19:38.01:0,38,392	0/0:17,0:17:48.13:0,48,544	0/0:20,0:20:57.14:0,57,628	0/0:12,0:12:27.08:0,27,308	1/1:9,9:18:26.28:244,26,0	0/0:17,0:17:48.95:0,49,506	0/0:13,0:13:36.10:0,36,407	0/0:21,0:21:51.11:0,51,565	0/0:11,0:11:24.95:0,25,271	0/0:20,0:20:54.12:0,54,593	0/0:15,0:15:36.11:0,36,415	1/1:3,24:27:69.03:631,69,0	1/1:2,23:25:60.03:549,60,0	0/0:17,0:17:48.14:0,48,554	1/1:3,16:19:42.02:384,42,0	0/0:4,0:13:29.03:0,29,176	0/0:3,0:6:8.52:0,9,43	0/0:25,0:25:66.16:0,66,741	0/0:11,0:11:25.32:0,25,278	0/0:18,0:18:45.13:0,45,519	0/0:15,0:16:38.93:0,39,418	1/1:1,12:13:36.01:329,36,0	0/0:18,0:18:39.10:0,39,441	0/0:22,0:22:54.14:0,54,612	0/0:10,0:10:30.06:0,30,328
chr10	4928095	.	G	GT	1723.97	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-8.944;DP=431;FS=4.083;HRun=9;HaplotypeScore=47.8597;InbreedingCoeff=0.8534;MQ=66.53;MQ0=3;MQRankSum=0.835;QD=16.74;ReadPosRankSum=1.290;VQSLOD=3.6006;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:79.76:0,80,679	0/0:7,0:7:17.96:0,18,151	1/1:24,0:8:2.73:20,3,0	0/0:14,0:9:5.93:0,6,52	0/0:18,1:20:19.88:0,20,389	0/0:21,0:21:59.96:0,60,514	0/0:4,0:4:5.99:0,6,52	0/0:27,0:26:53.90:0,54,467	0/0:9,0:9:17.98:0,18,156	0/0:16,0:16:41.97:0,42,364	0/0:17,0:17:38.97:0,39,336	0/0:6,0:6:11.99:0,12,104	0/0:7,0:7:21:0,21,182	0/0:7,0:7:11.97:0,12,104	1/1:3,14:17:13.05:372,13,0	1/1:2,9:11:27.07:299,27,0	0/0:22,0:22:62.91:0,63,535	1/1:5,24:29:66.32:740,66,0	0/0:22,0:21:53.97:0,54,465	0/0:16,0:16:38.98:0,39,335	0/0:3,0:3:5.98:0,6,48	0/0:11,0:11:29.98:0,30,257	0/0:6,0:6:11.99:0,12,104	0/0:8,0:8:20.99:0,21,182	1/1:6,16:22:22.01:456,22,0	0/0:17,0:17:47.99:0,48,417	0/0:19,0:19:53.99:0,54,469	0/0:17,0:17:44.99:0,45,391
chr10	4928667	.	GTC	G	5785.28	PASS	AB=0.971;AC=17;AF=0.304;AN=56;BaseQRankSum=15.198;DP=785;FS=6.286;HRun=0;HaplotypeScore=90.5374;InbreedingCoeff=0.9038;MQ=59.19;MQ0=7;MQRankSum=3.209;QD=22.60;ReadPosRankSum=3.941;VQSLOD=5.3792;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,38:45:81.26:1013,81,0	0/0:14,0:14:42.13:0,42,666	0/0:33,0:21:41.15:0,41,516	0/1:32,1:24:16.45:16,0,546	0/0:31,0:31:87.27:0,87,1361	0/0:29,0:29:75.24:0,75,1211	0/0:24,0:24:28.89:0,29,960	0/0:44,0:43:77.60:0,78,1168	0/0:25,1:26:26.94:0,27,955	0/0:40,0:40:99:0,105,1705	0/0:21,0:21:57.19:0,57,928	0/0:26,0:26:78.25:0,78,1263	0/0:24,0:24:66.21:0,66,1048	0/0:25,0:25:69.17:0,69,1054	1/1:2,19:21:36.11:450,36,0	1/1:3,30:30:19.69:776,20,0	0/0:38,0:38:96.75:0,97,1517	1/1:4,18:21:48.15:600,48,0	0/0:27,0:27:54.09:0,54,795	0/0:22,0:22:57.19:0,57,938	0/0:20,2:22:7.64:0,8,656	0/0:29,0:29:78.24:0,78,1226	0/0:27,0:27:72.24:0,72,1177	0/0:26,1:27:31.70:0,32,1021	1/1:2,20:22:45.14:563,45,0	1/1:2,35:37:55.70:1167,56,0	1/1:1,28:27:72.23:900,72,0	1/1:5,9:14:24.08:300,24,0
chr10	4929766	.	A	AGGG	1055.45	PASS	AB=0.902;AC=8;AF=0.143;AN=56;BaseQRankSum=6.226;DP=550;FS=4.573;HRun=3;HaplotypeScore=86.2011;InbreedingCoeff=0.1754;MQ=61.37;MQ0=9;MQRankSum=-2.127;QD=11.73;ReadPosRankSum=-1.789;VQSLOD=-0.3065;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:5,0:5:15.63:17,0,16	0/0:6,0:6:18.06:0,18,335	0/0:20,0:7:18.06:0,18,313	0/0:38,0:23:54.55:0,55,853	0/0:22,0:22:66.20:0,66,1154	0/0:16,0:16:48.14:0,48,848	0/0:33,0:33:92.91:0,93,1507	0/0:30,0:30:87.21:0,87,1352	0/0:29,0:29:84.28:0,84,1520	0/0:25,0:25:75.24:0,75,1309	0/0:13,0:13:39.13:0,39,699	0/0:28,0:28:78.20:0,78,1288	0/0:21,0:20:60.17:0,60,1033	0/0:29,0:29:87.20:0,87,1375	0/1:17,2:19:48.60:250,0,49	0/1:14,6:20:77.08:324,0,77	0/1:16,0:16:0.37:0,0,257	1/1:3,1:4:9.74:84,10,0	0/0:19,0:16:45.15:0,45,765	0/0:18,0:18:54.10:0,54,837	0/0:32,0:32:93.26:0,93,1580	0/0:17,0:17:29.08:0,29,794	0/0:17,0:17:51.11:0,51,792	0/0:40,0:40:99:0,120,2053	0/1:11,6:17:4.90:425,0,5	0/1:9,0:9:52.23:85,0,52	0/0:4,0:4:9.99:0,10,54	0/0:3,0:3:5.79:0,6,36
chr10	4929767	.	A	AGGGAG	1298.78	PASS	AB=0.899;AC=10;AF=0.179;AN=56;BaseQRankSum=8.804;DP=554;FS=6.661;HRun=0;HaplotypeScore=106.8872;InbreedingCoeff=0.2357;MQ=62.28;MQ0=9;MQRankSum=-2.179;QD=14.27;ReadPosRankSum=-2.189;VQSLOD=2.0177;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:5,0:5:8.86:19,0,9	0/0:6,0:6:18.06:0,18,390	0/0:19,0:7:21.04:0,21,319	0/0:34,0:23:38.22:0,38,795	0/0:22,0:22:63.21:0,63,1264	0/0:16,0:16:48.16:0,48,975	0/0:33,0:33:58.31:0,58,1625	0/0:33,0:33:56.07:0,56,1277	0/0:30,0:30:84.27:0,84,1684	0/0:25,0:25:74.91:0,75,1349	0/0:15,0:15:39.12:0,39,772	0/0:28,0:28:72.22:0,72,1385	0/0:21,0:20:60.18:0,60,1083	0/0:29,0:29:78.20:0,78,1396	0/1:16,2:18:16.90:292,0,17	0/1:14,6:20:84.37:497,0,84	0/1:16,0:16:0.32:0,0,370	1/1:3,1:4:8.03:91,8,0	0/0:21,0:18:48.08:0,48,781	0/0:18,0:18:51.14:0,51,942	0/0:32,0:32:93.28:0,93,1739	0/0:17,0:17:45.14:0,45,911	0/0:17,0:17:45.14:0,45,822	0/0:39,0:39:99:0,117,2375	0/1:10,6:16:15.61:499,0,16	0/1:9,0:9:14.86:15,0,56	0/0:4,0:4:11.20:0,11,69	1/1:3,0:3:2.66:23,3,0
chr10	4929770	.	A	AGGGAGGGA	2731.72	PASS	AB=0.904;AC=14;AF=0.250;AN=56;BaseQRankSum=4.064;DP=554;FS=10.341;HRun=0;HaplotypeScore=136.2392;InbreedingCoeff=0.7356;MQ=62.81;MQ0=8;MQRankSum=-2.703;QD=30.35;ReadPosRankSum=-4.348;VQSLOD=1.8869;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,0:5:6.01:64,6,0	0/0:6,0:6:18.06:0,18,424	0/0:16,0:8:14.93:0,15,276	0/0:36,0:22:17.47:0,17,675	0/0:23,0:23:57.18:0,57,1339	0/0:18,0:18:45.15:0,45,1103	0/0:33,0:33:74.43:0,74,1598	0/0:33,0:33:50.77:0,51,901	0/0:32,0:32:75.23:0,75,1814	0/0:26,0:26:56.84:0,57,1226	0/0:15,0:15:36.11:0,36,836	0/0:28,0:28:66.20:0,66,1551	0/0:21,0:20:39.13:0,39,1032	0/0:26,0:26:63.14:0,63,1362	1/1:18,0:18:33.03:586,33,0	0/1:16,4:21:44.51:912,0,45	0/1:17,0:17:5.86:6,0,508	1/1:3,0:3:9.03:220,9,0	0/0:22,0:19:36:0,36,644	0/0:16,0:16:45.13:0,45,1052	0/0:33,0:34:78.23:0,78,1757	0/0:19,0:19:39.09:0,39,968	0/0:16,0:16:33.10:0,33,763	0/0:40,0:40:99:0,105,2677	1/1:16,0:16:31.30:973,31,0	1/1:7,0:7:8.99:77,9,0	0/0:4,0:4:3.01:0,3,52	1/1:3,0:3:8.98:72,9,0
chr10	4930425	.	CCA	C	328.06	PASS	AB=0.925;AC=20;AF=0.417;AN=48;BaseQRankSum=4.120;DP=693;FS=0.884;HRun=0;HaplotypeScore=93.8385;InbreedingCoeff=0.1362;MQ=66.03;MQ0=31;MQRankSum=-0.173;QD=0.87;ReadPosRankSum=0.302;VQSLOD=1.1078;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:28,1:32:5.62:45,6,0	0/0:4,0:5:15.01:0,15,157	./.	./.	0/0:13,0:13:2.99:0,3,24	0/1:15,2:17:13.68:14,0,19	0/0:30,0:29:9:0,9,90	./.	0/1:25,3:28:71.87:72,0,176	0/1:22,0:21:22.81:25,0,23	0/1:24,2:25:13.95:14,0,160	0/0:16,0:16:18.01:0,18,221	0/0:18,0:18:6.02:0,6,88	0/1:24,0:22:0:0,0,0	1/1:24,0:31:2.75:14,3,0	1/1:22,9:32:11.69:92,12,0	0/0:34,0:38:33.95:0,34,493	1/1:21,0:22:8.20:41,8,0	./.	0/0:11,0:11:6.01:0,6,67	1/1:30,3:32:2.95:31,3,0	0/1:28,3:31:45.82:46,0,120	0/1:16,2:18:48.93:49,0,77	0/1:31,6:36:30.88:31,0,302	1/1:15,0:15:0.47:1,0,0	0/0:19,0:21:20.95:0,21,188	0/0:11,0:17:12:0,12,118	0/0:9,0:13:3:0,3,26
chr10	4930642	.	AAACAACAACAAC	A	4985.21	PASS	AB=0.792;AC=13;AF=0.232;AN=56;BaseQRankSum=10.811;DP=702;FS=1.699;HRun=0;HaplotypeScore=228.0364;InbreedingCoeff=0.4466;MQ=55.48;MQ0=5;MQRankSum=-10.159;QD=23.97;ReadPosRankSum=0.765;VQSLOD=4.1526;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:36:18.06:458,18,0	0/0:8,0:8:12:0,12,396	0/1:35,0:9:12.68:13,0,35	0/0:22,0:15:3:0,3,26	0/0:14,0:14:27.06:0,27,1251	0/0:19,0:19:21.07:0,21,1097	0/0:35,0:35:54.18:0,54,2654	0/0:35,0:35:15.92:0,16,422	0/0:31,0:31:51.16:0,51,2466	0/0:35,0:35:40.02:0,40,1964	0/0:12,0:12:24.07:0,24,1177	0/0:33,0:33:66.19:0,66,3159	0/0:33,0:33:48.16:0,48,2501	0/0:35,0:35:63.20:0,63,3230	0/1:23,1:32:99:229,0,129	0/1:12,18:29:99:1959,0,103	0/0:21,0:38:57.17:0,57,1655	0/1:5,0:7:26.95:38,0,27	0/0:15,0:13:9.50:0,10,418	0/0:14,0:15:24.55:0,25,1308	0/0:24,0:25:45.15:0,45,2225	0/0:16,0:16:18.05:0,18,738	0/0:18,0:18:33.99:0,34,1327	0/0:55,0:55:99:0,123,6214	0/1:10,0:14:45.72:46,0,119	1/1:10,14:24:42.08:1214,42,0	1/1:8,12:20:20.81:720,21,0	1/1:2,7:9:9.03:309,9,0
chr10	4930746	.	T	TCTTTTATTA	14832.30	PASS	AB=0.593;AC=7;AF=0.125;AN=56;BaseQRankSum=-8.225;DP=847;FS=2.167;HRun=0;HaplotypeScore=221.3331;InbreedingCoeff=0.8528;MQ=88.99;MQ0=0;MQRankSum=-16.310;QD=115.88;ReadPosRankSum=-0.015;VQSLOD=5.3079;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:93.25:0,93,2741	0/0:8,0:8:24.07:0,24,672	0/0:33,0:33:93.30:0,93,2751	0/0:34,0:34:87.24:0,87,2416	0/0:21,0:21:60.19:0,60,1744	0/0:34,0:34:96.33:0,96,2884	0/0:40,0:40:99:0,117,3455	0/0:43,0:43:99:0,126,3567	0/0:29,0:29:87.30:0,87,2660	0/0:39,0:39:99:0,108,3267	0/0:22,0:22:60.21:0,60,1862	0/0:44,0:44:99:0,123,3541	0/0:32,0:32:96.33:0,96,2936	0/0:38,0:38:99:0,111,3292	1/1:12,39:52:99:6852,148,0	0/1:11,18:35:9.18:3453,0,9	0/0:32,0:32:84.27:0,84,2517	1/1:4,7:12:27.09:1321,27,0	0/0:17,0:17:27.18:0,27,1370	0/0:26,0:26:69.24:0,69,2109	0/0:38,0:38:99:0,108,3114	0/0:22,0:22:60.21:0,60,1745	0/0:20,0:20:57.19:0,57,1664	0/0:42,0:41:99:0,123,3797	1/1:7,19:29:71.91:3206,72,0	0/0:32,0:32:96.30:0,96,2908	0/0:28,0:28:84.29:0,84,2606	0/0:11,0:11:18.06:0,18,559
chr10	4933848	.	CGG	C	2093.71	PASS	AB=1.000;AC=13;AF=0.241;AN=54;BaseQRankSum=3.833;DP=387;FS=22.003;HRun=11;HaplotypeScore=58.2913;InbreedingCoeff=0.8670;MQ=72.30;MQ0=0;MQRankSum=0.929;QD=14.15;ReadPosRankSum=8.427;VQSLOD=-0.3555;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,0:31:54.07:235,54,0	./.	0/0:14,0:14:18.78:0,19,198	0/1:8,0:7:2.83:3,0,29	0/0:16,0:16:20.87:0,21,247	0/0:13,0:14:29.56:0,30,383	0/0:16,0:17:41.61:0,42,543	0/0:15,0:15:11.96:0,12,88	0/0:15,0:15:37.91:0,38,511	0/0:9,0:9:11.98:0,12,117	0/0:6,0:7:8.72:0,9,63	0/0:8,0:8:17.16:0,17,191	0/0:12,0:12:15.90:0,16,158	0/0:12,0:12:25.69:0,26,297	1/1:8,9:17:36.84:355,37,0	1/1:3,12:15:36.09:383,36,0	1/1:7,0:32:57.60:251,58,0	1/1:6,23:29:62.97:669,63,0	0/0:4,0:5:15:0,15,181	0/0:11,0:12:14.61:0,15,153	0/0:16,0:17:15.95:0,16,330	0/0:9,0:9:16.35:0,16,149	0/0:12,0:12:14.78:0,15,181	0/0:17,0:17:39.60:0,40,596	1/1:3,13:16:36.09:382,36,0	0/0:13,0:14:17.33:0,17,167	0/0:7,0:7:20.98:0,21,253	0/0:4,0:4:5.97:0,6,45
chr10	4938737	.	TA	T	2497.88	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=14.953;DP=640;FS=0.000;HRun=9;HaplotypeScore=82.0296;InbreedingCoeff=0.9761;MQ=69.74;MQ0=1;MQRankSum=-1.276;QD=19.67;ReadPosRankSum=2.164;VQSLOD=4.1412;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,29:32:75.04:686,75,0	0/0:16,0:16:42.12:0,42,485	0/0:20,1:19:6.20:0,6,360	0/0:15,0:13:30.05:0,30,324	0/0:38,0:38:99:0,99,1134	0/0:14,0:14:42.11:0,42,476	0/0:12,0:12:36.08:0,36,395	0/0:34,0:34:69.30:0,69,814	0/0:18,0:18:45.13:0,45,519	0/0:22,0:22:60.17:0,60,685	0/0:23,1:24:32.69:0,33,609	0/0:27,0:27:75.20:0,75,845	0/0:16,0:16:45.12:0,45,507	0/0:20,0:20:57.16:0,57,650	1/1:3,17:20:48.02:439,48,0	1/1:2,20:22:51.50:467,51,0	0/0:24,0:23:66.20:0,66,761	1/1:4,13:17:39.02:357,39,0	0/0:28,0:28:69.11:0,69,749	0/0:24,1:25:29.70:0,30,596	0/0:9,0:9:27.01:0,27,275	0/0:27,1:28:38.71:0,39,681	0/0:25,0:26:66.02:0,66,732	0/0:17,0:18:53.97:0,54,591	1/1:3,33:36:80.95:724,81,0	0/0:30,2:32:29.75:0,30,828	0/0:24,1:25:44.72:0,45,749	0/0:20,0:20:57.15:0,57,647
chr10	4941415	.	AATCC	A	5356.02	PASS	AC=36;AF=0.692;AN=52;BaseQRankSum=7.646;DP=923;FS=0.469;HRun=0;HaplotypeScore=145.2082;InbreedingCoeff=0.8944;MQ=62.80;MQ0=38;MQRankSum=0.815;QD=9.43;ReadPosRankSum=2.444;VQSLOD=4.2729;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:52:33.04:0,33,512	0/0:10,0:10:24.08:0,24,498	./.	./.	1/1:17,13:29:26.96:336,27,0	1/1:13,10:23:24.08:368,24,0	1/1:29,8:37:5.61:91,6,0	0/0:39,0:37:16.95:0,17,103	0/0:36,0:36:75.24:0,75,1535	1/1:23,16:39:42.13:602,42,0	1/1:13,5:18:8.99:112,9,0	1/1:18,13:31:27.09:414,27,0	1/1:19,20:39:23.12:366,23,0	1/1:16,14:30:27.09:414,27,0	1/1:16,0:38:27.22:157,27,0	1/1:28,0:46:20.02:146,20,0	0/0:18,0:38:42.11:0,42,686	1/1:6,0:13:6.01:56,6,0	1/1:18,7:21:18.95:273,19,0	1/1:14,14:28:33.06:455,33,0	1/1:30,20:49:36.12:552,36,0	1/1:14,15:29:36.03:481,36,0	1/1:16,5:21:3.01:46,3,0	1/1:18,23:41:30.10:460,30,0	1/1:14,0:28:3.95:29,4,0	0/0:31,0:30:48.15:0,48,915	0/0:28,0:28:42.14:0,42,884	0/0:25,0:24:42.14:0,42,929
chr10	4942147	.	C	CTATA	2198.65	PASS	AB=0.763;AC=8;AF=0.143;AN=56;BaseQRankSum=0.334;DP=502;FS=3.691;HRun=0;HaplotypeScore=83.2811;InbreedingCoeff=0.4119;MQ=71.78;MQ0=1;MQRankSum=1.244;QD=19.63;ReadPosRankSum=0.482;VQSLOD=3.2879;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:10,13:28:15.53:577,0,16	0/1:4,0:8:13.50:13,0,67	0/0:12,0:12:5.29:0,5,58	0/1:9,0:6:6.81:7,0,8	0/0:12,0:12:33.11:0,33,548	0/0:17,0:17:36.12:0,36,605	0/0:14,0:14:21.05:0,21,322	0/0:35,0:37:72.21:0,72,1117	0/0:6,0:6:6.02:0,6,101	0/0:22,0:22:48.15:0,48,779	0/0:9,0:9:18.05:0,18,278	0/0:20,0:20:36.12:0,36,601	0/0:14,0:14:30.10:0,30,500	0/0:17,0:18:33.11:0,33,532	0/0:23,0:26:51.15:0,51,789	0/0:18,0:19:42.12:0,42,653	0/0:22,0:24:69.22:0,69,1114	0/0:24,0:25:44.49:0,44,894	0/0:18,0:18:42.61:0,43,700	0/0:16,0:16:33.11:0,33,554	0/0:21,0:22:30.08:0,30,448	0/0:8,0:8:6.02:0,6,101	0/0:18,0:19:48.16:0,48,780	0/0:9,0:8:18.06:0,18,302	0/0:22,0:23:60.16:0,60,928	0/1:12,5:20:14.56:606,0,15	1/1:11,6:22:26.30:462,26,0	1/1:3,8:25:40.43:678,40,0
chr10	4943388	.	AGT	A	528.24	PASS	AB=0.923;AC=17;AF=0.315;AN=54;BaseQRankSum=3.252;DP=613;FS=0.000;HRun=0;HaplotypeScore=88.6204;InbreedingCoeff=-0.1300;MQ=54.39;MQ0=23;MQRankSum=-0.415;QD=1.44;ReadPosRankSum=1.830;VQSLOD=1.5637;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:30,1:31:14.38:14,0,94	0/0:10,0:9:5.87:0,6,90	./.	0/1:25,0:9:0:0,0,0	0/0:15,0:14:6.02:0,6,90	0/1:17,2:19:44.15:44,0,183	0/1:30,1:31:62.50:63,0,298	0/0:23,0:20:5.88:0,6,52	0/0:22,0:22:32.59:0,33,425	0/1:24,0:24:7.35:7,0,224	0/0:14,0:14:11.86:0,12,126	0/1:24,1:25:47.68:48,0,114	0/0:16,0:16:15.03:0,15,201	0/1:17,3:20:17.78:18,0,152	1/1:12,10:22:12.03:131,12,0	0/1:21,1:21:18.18:18,0,287	1/1:13,0:17:5.68:28,6,0	0/1:21,10:29:7.81:144,0,8	0/0:20,0:17:6.02:0,6,79	0/0:15,0:15:5.99:0,6,50	0/1:34,1:34:28.23:28,0,300	0/1:16,0:15:11.80:12,0,221	0/1:15,1:16:11.81:12,0,226	0/0:41,1:40:12.26:0,12,563	0/1:17,11:29:37.44:115,0,37	0/0:26,0:25:9.61:0,10,147	0/0:17,0:18:12.43:0,12,111	0/0:9,0:7:9.02:0,9,96
chr10	4943400	.	T	TGT	224.98	PASS	AB=0.958;AC=12;AF=0.222;AN=54;BaseQRankSum=2.126;DP=611;FS=9.427;HRun=0;HaplotypeScore=89.0030;InbreedingCoeff=0.4277;MQ=52.19;MQ0=33;MQRankSum=-0.654;QD=1.38;ReadPosRankSum=-0.191;VQSLOD=0.9904;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:24,4:30:8.99:49,0,9	0/0:11,0:10:5.31:0,5,64	0/1:26,0:7:0:0,0,0	./.	0/0:14,0:13:6.02:0,6,65	0/1:15,0:14:24.58:25,0,134	0/0:29,0:29:23.21:0,23,246	1/1:22,0:19:2.29:6,2,0	0/0:23,0:23:17.05:0,17,263	0/1:21,0:21:13.34:13,0,150	0/0:14,0:14:9:0,9,88	0/0:24,0:24:14.32:0,14,121	0/0:19,0:19:11.68:0,12,130	0/0:21,0:21:14.87:0,15,144	0/0:18,0:18:11.23:0,11,56	0/0:21,0:20:26.80:0,27,258	0/0:17,0:16:5.64:0,6,27	0/0:28,0:26:4.08:0,4,46	0/0:15,0:13:5.98:0,6,65	0/0:15,0:15:3.01:0,3,33	0/0:34,0:33:13.30:0,13,217	0/0:19,0:18:20.60:0,21,187	0/0:16,0:16:17.88:0,18,177	0/0:39,0:38:41.94:0,42,438	0/0:37,0:35:19.40:0,19,110	1/1:21,0:20:11.97:99,12,0	1/1:18,0:18:8.93:95,9,0	1/1:10,0:7:8.91:83,9,0
chr10	4945275	.	TA	T	1654.61	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=8.049;DP=820;FS=1.169;HRun=2;HaplotypeScore=76.7357;InbreedingCoeff=0.9990;MQ=82.12;MQ0=0;MQRankSum=-2.919;QD=33.09;ReadPosRankSum=1.476;VQSLOD=3.6749;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,50:50:99:1749,135,0	0/0:17,0:17:48.15:0,48,689	0/0:30,0:30:76.65:0,77,1036	0/0:19,0:19:50.61:0,51,625	0/0:18,0:18:54.17:0,54,778	0/0:22,0:22:66.21:0,66,957	0/0:36,0:36:99:0,108,1577	0/0:41,0:41:99:0,114,1636	0/0:29,0:29:84.27:0,84,1224	0/0:29,0:29:87.27:0,87,1223	0/0:17,0:17:51.17:0,51,754	0/0:32,0:32:96.27:0,96,1345	0/0:38,0:38:99:0,114,1684	0/0:38,0:38:99:0,114,1668	0/0:46,0:46:99:0,138,1985	0/0:37,0:37:99:0,108,1562	0/0:37,0:37:99:0,111,1600	0/0:26,0:26:72.24:0,72,1064	0/0:18,0:18:51.16:0,51,737	0/0:23,0:23:69.23:0,69,1020	0/0:31,0:31:93.28:0,93,1332	0/0:30,0:30:90.30:0,90,1328	0/0:15,0:15:45.13:0,45,629	0/0:33,0:33:99:0,99,1445	0/0:30,0:30:90.28:0,90,1278	0/0:34,0:34:99:0,99,1422	0/0:35,0:35:99:0,105,1533	0/0:9,0:9:27.09:0,27,399
chr10	4951275	.	C	CT	350.82	PASS	AB=0.882;AC=5;AF=0.089;AN=56;BaseQRankSum=-0.358;DP=500;FS=5.580;HRun=12;HaplotypeScore=53.5358;InbreedingCoeff=0.0408;MQ=69.06;MQ0=7;MQRankSum=-0.823;QD=3.99;ReadPosRankSum=-0.562;VQSLOD=0.1972;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:22,2:24:23.64:24,0,237	0/0:8,0:9:22.92:0,23,159	0/1:13,0:9:2.52:3,0,5	0/1:12,0:9:15.40:15,0,52	0/0:23,0:25:49.71:0,50,352	0/0:23,1:23:24.33:0,24,337	0/1:10,1:11:2.39:2,0,143	0/0:33,0:34:66.87:0,67,482	0/0:6,0:7:14.90:0,15,109	0/0:12,0:12:20.86:0,21,153	0/0:10,0:11:28.88:0,29,203	0/0:12,0:11:27.23:0,27,193	0/0:19,0:18:38.69:0,39,278	0/0:17,0:17:40.60:0,41,278	0/0:18,0:18:30.26:0,30,220	0/0:16,0:16:41.73:0,42,305	0/1:7,21:28:8.52:409,0,9	0/0:23,0:24:61.66:0,62,444	0/0:31,0:33:58.58:0,59,417	0/0:10,0:10:21.76:0,22,155	0/0:17,0:18:28.78:0,29,198	0/0:9,0:10:10.94:0,11,72	0/0:7,1:8:11.88:0,12,86	0/0:11,0:11:14.88:0,15,109	0/0:24,0:24:44.69:0,45,327	0/0:31,0:31:79.33:0,79,572	0/0:19,0:19:25.43:0,25,279	0/0:17,0:16:26.77:0,27,197
chr10	4952979	.	T	TCC	511.88	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=7.132;DP=551;FS=1.424;HRun=1;HaplotypeScore=91.1654;InbreedingCoeff=0.7525;MQ=55.88;MQ0=29;MQRankSum=-2.006;QD=5.69;ReadPosRankSum=0.425;VQSLOD=-0.3301;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,21:21:9.03:136,9,0	0/0:15,0:15:29.44:0,29,230	0/0:15,0:11:23.06:0,23,251	0/0:14,0:7:0.60:0,1,97	0/0:17,0:16:14.98:0,15,124	0/0:20,0:20:32.93:0,33,307	0/0:30,0:29:66.81:0,67,627	0/0:28,0:27:76.74:0,77,667	0/0:19,0:18:43.36:0,43,333	0/0:23,0:20:57.44:0,57,546	0/0:22,0:22:35.77:0,36,316	0/0:30,0:30:26.11:0,26,274	0/0:14,0:13:22.94:0,23,220	0/1:22,0:22:2.96:3,0,234	0/0:20,0:19:11.81:0,12,196	0/0:14,0:12:29.76:0,30,239	0/0:22,0:20:44.79:0,45,451	0/0:15,0:15:22.75:0,23,210	0/0:13,0:13:38.80:0,39,300	0/0:16,0:16:17.91:0,18,166	0/0:35,0:33:51.16:0,51,411	0/0:15,0:13:14.85:0,15,124	0/0:12,0:11:17.87:0,18,150	0/0:42,0:36:44.78:0,45,385	0/0:10,0:10:24.88:0,25,208	1/1:14,2:15:41.53:390,42,0	1/1:15,0:14:10.64:75,11,0	1/1:2,10:10:3.01:51,3,0
chr10	4952997	.	TCTCTCTCTCTCTCTCTCTCTCC	T	1297.05	PASS	AB=0.925;AC=11;AF=0.204;AN=54;BaseQRankSum=4.490;DP=567;FS=2.216;HRun=0;HaplotypeScore=232.3549;InbreedingCoeff=0.3030;MQ=46.70;MQ0=44;MQRankSum=1.646;QD=8.48;ReadPosRankSum=-0.197;VQSLOD=2.3720;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:25:11.57:267,12,0	0/0:17,0:17:23.65:0,24,355	0/0:6,0:3:3:0,3,26	./.	0/0:18,0:17:18.05:0,18,475	0/0:23,0:23:38.75:0,39,1378	0/0:38,0:36:82.82:0,83,1995	0/0:26,0:23:33.12:0,33,290	0/1:19,0:17:24.01:24,0,187	0/0:20,0:17:42.10:0,42,1275	0/0:20,0:20:20.35:0,20,534	0/0:32,0:31:53.55:0,54,1387	0/0:11,0:10:17.90:0,18,293	0/0:22,0:22:42.70:0,43,1010	0/1:24,0:21:99:236,0,156	0/0:14,0:10:1.50:0,2,241	0/0:23,0:21:11.46:0,11,619	1/1:19,0:19:22.52:386,23,0	0/0:16,0:15:28.56:0,29,712	0/0:16,0:16:12.20:0,12,192	0/0:32,0:27:24.48:0,24,686	0/0:16,0:14:22.40:0,22,886	0/0:13,0:12:18.06:0,18,692	0/0:46,0:40:45.32:0,45,1065	0/1:15,0:11:15.34:15,0,47	0/1:20,0:19:45.34:261,0,45	0/1:6,9:14:19.46:170,0,19	1/1:11,0:9:2.82:90,3,0
chr10	4953003	.	T	TCC	949.75	PASS	AB=0.882;AC=13;AF=0.241;AN=54;BaseQRankSum=7.986;DP=543;FS=6.878;HRun=1;HaplotypeScore=99.2284;InbreedingCoeff=0.5439;MQ=45.44;MQ0=46;MQRankSum=-2.876;QD=6.37;ReadPosRankSum=-0.797;VQSLOD=-0.4755;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:23:29.82:306,30,0	0/0:13,0:13:27.63:0,28,197	0/0:2,0:1:3:0,3,26	./.	0/0:19,0:18:17.97:0,18,147	0/0:24,0:24:35.44:0,35,321	0/0:34,0:32:78.13:0,78,695	0/0:24,0:21:59.71:0,60,427	0/0:20,0:18:20.06:0,20,149	0/0:21,0:18:53.85:0,54,494	0/0:17,0:17:20.88:0,21,194	0/0:31,0:29:18.70:0,19,253	0/0:12,0:11:21.39:0,21,176	0/1:21,0:21:9.33:9,0,168	0/1:9,11:17:45.43:143,0,45	0/0:17,0:13:6.34:0,6,136	0/0:21,0:19:37.01:0,37,387	0/1:17,0:17:61.72:166,0,62	0/0:17,0:16:42.77:0,43,292	0/0:17,0:17:14.51:0,15,139	0/0:28,0:23:20.79:0,21,164	0/0:16,0:14:20.66:0,21,165	0/0:13,0:13:17.81:0,18,143	0/0:45,0:39:43.64:0,44,362	1/1:14,0:10:2.50:30,3,0	1/1:22,0:20:28.61:306,29,0	1/1:15,0:14:6.65:68,7,0	1/1:12,0:9:2.88:83,3,0
chr10	4953015	.	TCTCC	T	1243.81	PASS	AB=1.000;AC=20;AF=0.370;AN=54;BaseQRankSum=4.543;DP=567;FS=12.238;HRun=0;HaplotypeScore=109.7237;InbreedingCoeff=0.1005;MQ=44.11;MQ0=50;MQRankSum=0.833;QD=3.83;ReadPosRankSum=-1.937;VQSLOD=1.2889;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:23:19.08:218,19,0	0/0:9,0:9:10.69:0,11,73	./.	0/0:3,0:1:2.60:0,3,10	0/0:23,0:23:26.48:0,26,194	0/1:25,0:25:28.10:28,0,320	0/0:37,0:35:52.99:0,53,695	0/0:23,0:20:20.96:0,21,135	0/1:19,0:17:39.49:39,0,86	0/0:19,0:16:31.04:0,31,329	0/0:17,0:17:10.35:0,10,132	0/1:26,0:24:68.09:68,0,221	0/0:13,0:12:7.87:0,8,81	0/1:24,0:24:99:101,0,157	0/1:21,0:19:33.09:78,0,33	0/1:17,0:14:77.14:77,0,90	0/1:29,0:26:28.23:28,0,317	1/1:22,0:22:36.60:330,37,0	0/0:14,0:13:14.63:0,15,114	0/0:15,0:15:15.77:0,16,148	0/1:26,0:20:8.41:8,0,111	0/0:22,0:20:30.89:0,31,283	0/1:13,0:13:13.29:13,0,63	0/0:31,14:38:5.80:0,6,298	1/1:20,0:15:5.81:141,6,0	1/1:24,0:21:2:171,2,0	0/1:17,0:16:13.86:27,0,14	1/1:13,0:10:10.89:87,11,0
chr10	4956756	.	GAA	G	1947.70	PASS	AB=0.869;AC=11;AF=0.196;AN=56;BaseQRankSum=9.060;DP=664;FS=1.349;HRun=13;HaplotypeScore=99.3085;InbreedingCoeff=0.6164;MQ=72.17;MQ0=0;MQRankSum=0.759;QD=11.59;ReadPosRankSum=4.003;VQSLOD=2.6630;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,30:40:62.72:737,63,0	0/0:14,0:16:32.59:0,33,427	0/0:14,0:15:3.95:0,4,68	0/1:10,0:11:31.45:31,0,128	0/0:20,1:22:21.99:0,22,622	0/0:21,0:28:76.17:0,76,926	0/0:20,1:24:36.06:0,36,760	0/0:34,0:40:77.61:0,78,999	0/0:19,0:23:60.99:0,61,708	0/1:15,2:20:15.36:15,0,403	0/0:13,1:18:17.94:0,18,474	0/0:18,0:21:50.11:0,50,613	0/1:21,3:24:42.22:42,0,386	0/0:19,0:19:48.08:0,48,604	0/0:8,0:25:35.99:0,36,342	0/0:8,0:27:39.03:0,39,371	0/0:24,0:28:75.52:0,76,967	0/0:7,0:25:36.08:0,36,391	0/0:19,1:22:18.48:0,18,485	0/0:23,0:25:50.12:0,50,628	0/0:14,0:15:17.58:0,18,487	0/0:16,1:20:18.92:0,19,481	0/0:24,1:30:29.49:0,29,620	0/0:23,0:28:70.68:0,71,917	0/0:7,0:24:38.92:0,39,364	1/1:9,23:36:81.26:711,81,0	1/1:6,20:30:49.94:492,50,0	1/1:4,3:7:8.92:87,9,0
chr10	4960882	.	A	AAG	3780.27	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-11.469;DP=668;FS=0.000;HRun=0;HaplotypeScore=79.1892;InbreedingCoeff=0.9902;MQ=66.45;MQ0=2;MQRankSum=-0.290;QD=38.57;ReadPosRankSum=1.848;VQSLOD=5.1964;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:34:51.19:0,51,911	0/0:12,0:12:36.11:0,36,446	0/0:20,0:21:35.93:0,36,408	0/0:28,0:20:38.91:0,39,449	0/0:13,0:13:27.08:0,27,335	0/0:29,0:29:81.24:0,81,992	0/0:18,0:18:17.02:0,17,458	0/0:46,0:46:72.50:0,73,1143	0/0:16,0:16:42.11:0,42,506	0/0:33,0:33:87.23:0,87,1051	0/0:14,0:14:27.08:0,27,335	0/0:21,0:21:54.16:0,54,658	0/0:30,0:30:78.22:0,78,943	0/0:22,0:22:60.19:0,60,743	1/1:4,21:25:41.29:916,41,0	1/1:3,26:29:75.26:1230,75,0	0/0:28,0:28:69.22:0,69,852	1/1:2,18:21:13.98:749,14,0	0/0:12,0:11:24.07:0,24,289	0/0:20,0:20:54.17:0,54,669	0/0:12,0:12:33.07:0,33,393	0/0:26,0:26:60.19:0,60,738	0/0:27,0:27:56.90:0,57,668	0/0:21,0:21:63.20:0,63,781	1/1:2,21:22:54.18:886,54,0	0/0:32,0:32:72.22:0,72,882	0/0:35,0:35:96.25:0,96,1138	0/0:20,0:20:51.16:0,51,632
chr10	4965226	.	T	TGAGA	1535.24	PASS	AB=0.851;AC=18;AF=0.321;AN=56;BaseQRankSum=8.913;DP=641;FS=1.714;HRun=0;HaplotypeScore=150.2777;InbreedingCoeff=0.7761;MQ=73.22;MQ0=14;MQRankSum=-4.929;QD=8.00;ReadPosRankSum=-2.025;VQSLOD=2.5484;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,13:30:4.26:75,4,0	0/0:6,0:7:11.21:0,11,125	0/0:68,0:32:10.80:0,11,144	0/0:80,0:27:3.88:0,4,27	0/0:13,0:14:23.90:0,24,342	0/0:16,0:17:17.76:0,18,481	0/0:22,0:25:49.38:0,49,796	0/0:26,0:26:38.81:0,39,527	0/0:16,0:18:28.33:0,28,506	0/0:21,0:22:37.63:0,38,626	0/0:9,0:10:10.13:0,10,224	0/0:21,0:21:34.53:0,35,546	0/0:15,0:15:30.10:0,30,488	0/0:23,0:24:48.13:0,48,720	1/1:26,1:26:20.95:241,21,0	1/1:17,1:16:14.95:132,15,0	0/1:15,0:26:30.32:297,0,30	1/1:10,4:15:20.93:286,21,0	0/0:15,0:15:27.03:0,27,364	0/0:13,0:14:15.80:0,16,377	0/0:21,0:23:37.40:0,37,682	0/0:12,0:13:21.06:0,21,315	0/1:11,0:12:1.43:1,0,225	0/0:32,0:35:48.71:0,49,818	1/1:18,4:19:17.98:262,18,0	1/1:18,0:17:30.84:247,31,0	1/1:11,0:11:10.84:126,11,0	1/1:9,0:9:8.36:63,8,0
chr10	4965245	.	GAGAGAC	G	699.30	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=3.324;DP=669;FS=0.000;HRun=0;HaplotypeScore=165.2155;InbreedingCoeff=0.3130;MQ=61.33;MQ0=20;MQRankSum=-2.705;QD=9.20;ReadPosRankSum=-2.934;VQSLOD=2.2212;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:29:1.60:0,2,55	0/0:7,0:7:15.03:0,15,344	0/0:45,0:17:2.51:0,3,7	0/0:64,0:13:0:0,0,0	0/0:16,0:16:27.02:0,27,636	0/0:19,0:19:36.10:0,36,885	0/0:29,0:29:25.35:0,25,976	0/0:39,0:37:44.64:0,45,365	0/0:20,0:20:41.92:0,42,929	0/0:26,0:25:57.10:0,57,1281	0/0:8,0:8:12.04:0,12,361	1/1:14,8:22:39.09:647,39,0	0/0:16,0:16:42.07:0,42,980	0/0:25,0:25:60.14:0,60,1449	0/0:30,0:29:47.44:0,47,783	0/0:23,0:19:21.73:0,22,513	0/0:26,0:26:11.65:0,12,772	0/0:13,0:13:23.97:0,24,354	0/0:18,0:18:26.75:0,27,378	0/0:17,0:17:29.39:0,29,492	0/0:30,0:30:68.89:0,69,1234	0/0:15,0:15:20.40:0,20,367	0/0:16,0:16:23.87:0,24,481	0/0:36,0:36:62.65:0,63,1356	0/0:22,0:19:12.03:0,12,171	0/1:26,0:24:91.11:91,0,103	0/1:13,0:13:44.46:44,0,145	0/1:15,0:14:28.25:38,0,28
chr10	4965249	.	GAC	G	1170.15	PASS	AB=0.944;AC=15;AF=0.268;AN=56;BaseQRankSum=9.420;DP=663;FS=0.428;HRun=0;HaplotypeScore=125.0123;InbreedingCoeff=0.2245;MQ=62.28;MQ0=20;MQRankSum=-2.484;QD=4.05;ReadPosRankSum=-1.405;VQSLOD=2.3037;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:28,1:26:1.35:22,0,1	0/1:6,0:6:2.44:2,0,215	0/0:39,0:14:14.52:0,15,149	0/1:60,0:14:4.39:4,0,20	0/0:17,0:17:33.02:0,33,476	0/0:20,0:20:26.70:0,27,710	0/0:32,0:32:53.24:0,53,1057	0/0:38,0:36:89.20:0,89,899	0/0:19,0:19:29.43:0,29,647	0/0:27,0:26:58.88:0,59,944	0/0:8,0:8:10.30:0,10,294	0/1:22,0:22:99:152,0,178	0/0:15,0:15:45.09:0,45,704	0/0:25,0:25:61.42:0,61,1106	0/1:26,5:30:27.28:27,0,355	0/1:21,1:18:4.59:5,0,207	0/1:25,1:26:30.70:209,0,31	0/1:13,0:13:99:107,0,122	0/0:17,0:17:44.67:0,45,529	0/0:15,0:15:30.66:0,31,487	0/0:35,0:35:79.14:0,79,1158	0/0:16,0:16:24.68:0,25,404	0/0:15,0:15:16.41:0,16,425	0/0:36,0:36:37.31:0,37,1060	0/1:16,7:20:46.35:186,0,46	1/1:25,1:24:46.65:341,47,0	1/1:13,0:13:1.52:86,2,0	1/1:16,0:15:24.69:191,25,0
chr10	4968381	.	C	CA	1873.76	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=12.022;DP=617;FS=8.444;HRun=3;HaplotypeScore=115.2805;InbreedingCoeff=0.8511;MQ=53.55;MQ0=25;MQRankSum=-10.248;QD=9.05;ReadPosRankSum=1.001;VQSLOD=0.5677;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:29,2:30:40.26:267,40,0	0/0:7,0:6:15.03:0,15,170	0/1:51,0:11:22.43:22,0,120	0/0:37,0:8:12.17:0,12,72	0/0:30,0:30:75.40:0,75,801	0/0:19,0:18:42.04:0,42,458	0/0:15,0:15:4.60:0,5,312	0/0:39,0:36:82.30:0,82,876	0/0:15,0:14:38.92:0,39,394	0/0:30,0:27:71.43:0,71,801	0/0:22,1:22:31.65:0,32,643	0/0:18,0:18:17.08:0,17,361	0/0:16,0:16:12.95:0,13,319	0/0:16,0:15:40.65:0,41,461	1/1:17,9:24:51.38:434,51,0	1/1:11,1:12:20.35:158,20,0	0/0:26,0:24:33.08:0,33,233	1/1:9,9:17:33.61:325,34,0	0/0:23,0:18:52.25:0,52,584	0/0:22,0:21:18.71:0,19,462	0/0:18,0:17:41.67:0,42,462	0/0:17,0:16:41.54:0,42,434	0/0:12,0:12:30.01:0,30,346	0/0:26,0:26:48.05:0,48,566	1/1:12,3:15:35.97:264,36,0	1/1:25,1:25:37.69:309,38,0	1/1:18,0:18:31.60:187,32,0	1/1:9,0:9:3:110,3,0
chr10	4968382	.	AAC	A	4380.90	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=11.492;DP=616;FS=1.198;HRun=0;HaplotypeScore=112.8255;InbreedingCoeff=0.7337;MQ=53.74;MQ0=25;MQRankSum=-10.670;QD=16.29;ReadPosRankSum=0.202;VQSLOD=4.8990;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:16,16:30:65.91:824,66,0	0/0:7,0:6:15.04:0,15,214	0/1:51,0:11:7.90:8,0,123	0/1:37,0:8:5.10:5,0,53	0/0:30,0:30:39.13:0,39,909	0/0:19,0:18:42.01:0,42,594	0/0:15,0:15:16.92:0,17,338	0/0:40,0:37:70.27:0,70,1015	0/0:16,0:15:43.76:0,44,528	0/0:30,0:27:73.71:0,74,1054	0/0:23,0:22:61.66:0,62,838	0/0:18,0:18:1.28:0,1,512	0/0:15,0:15:35.47:0,35,430	0/0:16,0:15:42.11:0,42,632	1/1:26,0:24:53.68:650,54,0	1/1:11,0:11:21:202,21,0	0/1:27,0:24:41.18:41,0,154	1/1:17,0:16:39.42:426,39,0	0/0:23,0:18:49.66:0,50,745	0/0:22,0:21:4.81:0,5,549	0/0:18,0:17:38.80:0,39,605	0/0:16,1:16:40.20:0,40,493	0/0:12,0:12:28.80:0,29,407	0/0:26,0:26:46.97:0,47,712	1/1:15,0:15:39.07:463,39,0	1/1:12,13:24:68.29:881,68,0	1/1:9,10:19:31.77:569,32,0	1/1:3,6:9:19.69:312,20,0
chr10	4968383	.	AC	A	2517.46	PASS	AB=0.959;AC=20;AF=0.357;AN=56;BaseQRankSum=13.651;DP=616;FS=0.758;HRun=1;HaplotypeScore=110.0360;InbreedingCoeff=0.6363;MQ=54.03;MQ0=25;MQRankSum=-11.703;QD=9.06;ReadPosRankSum=0.296;VQSLOD=0.9885;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:31,1:30:61.91:444,62,0	0/0:7,0:6:14.77:0,15,148	0/1:52,0:12:6.82:7,0,107	0/0:35,1:8:1.66:0,2,57	0/1:28,1:29:15:15,0,616	0/0:19,0:18:41.73:0,42,449	0/0:14,0:14:7.14:0,7,229	0/0:40,0:37:68.16:0,68,804	0/0:16,0:15:37.53:0,38,345	0/0:30,0:27:61.58:0,62,779	0/0:22,1:22:52.27:0,52,618	0/1:17,2:19:22.26:22,0,417	0/0:15,0:15:24.20:0,24,305	0/0:17,0:16:39.91:0,40,450	1/1:20,6:24:59.58:419,60,0	1/1:6,5:11:23.60:159,24,0	0/1:25,1:23:76.19:118,0,76	1/1:15,2:16:41.80:319,42,0	0/0:23,0:18:48.26:0,48,560	0/0:22,0:21:3.07:0,3,406	0/0:20,0:19:38.47:0,38,465	0/0:17,0:16:40.32:0,40,378	0/0:12,0:12:32.89:0,33,353	0/0:26,0:26:38.85:0,39,516	1/1:5,9:14:38.72:286,39,0	1/1:24,1:24:66.60:515,67,0	1/1:18,0:18:20.11:261,20,0	1/1:7,2:9:22.11:157,22,0
chr10	4968384	.	C	CAA	1043.98	PASS	AB=0.995;AC=12;AF=0.214;AN=56;BaseQRankSum=8.634;DP=618;FS=3.472;HRun=10;HaplotypeScore=130.3370;InbreedingCoeff=0.3797;MQ=55.14;MQ0=24;MQRankSum=-10.318;QD=4.70;ReadPosRankSum=-2.841;VQSLOD=-0.1249;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:30:15.34:85,0,15	0/0:7,0:6:12.01:0,12,118	0/1:53,0:12:0.94:1,0,114	0/0:38,0:9:14.24:0,14,93	0/0:29,0:29:72.15:0,72,642	0/0:18,0:18:33.03:0,33,331	0/0:13,0:14:12.86:0,13,196	0/0:40,0:37:44.99:0,45,226	0/0:18,0:17:41.88:0,42,383	0/0:28,0:26:65.80:0,66,631	0/0:24,0:23:44.71:0,45,519	0/0:19,0:19:39.30:0,39,374	0/0:15,0:15:16.68:0,17,214	0/0:17,0:16:41.70:0,42,394	0/1:26,0:24:7.21:147,0,7	1/1:11,0:11:7.93:94,8,0	1/1:15,9:23:44.95:557,45,0	1/1:17,0:16:3.81:99,4,0	0/0:23,0:18:45.04:0,45,444	0/0:21,0:20:38.45:0,38,422	0/0:20,0:19:45:0,45,438	0/0:16,0:16:33.01:0,33,314	0/0:10,0:12:20.66:0,21,259	0/0:26,0:26:44.20:0,44,449	0/1:14,0:14:6.85:145,0,7	0/1:24,0:24:41.83:62,0,42	0/1:18,0:18:7.82:8,0,40	0/0:9,0:9:16.89:0,17,60
chr10	4968387	.	A	AC	1295.42	PASS	AB=0.861;AC=12;AF=0.214;AN=56;BaseQRankSum=10.558;DP=619;FS=2.391;HRun=0;HaplotypeScore=122.3617;InbreedingCoeff=0.5408;MQ=58.95;MQ0=24;MQRankSum=-9.804;QD=8.25;ReadPosRankSum=3.710;VQSLOD=3.3922;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:28,4:30:26.53:400,27,0	0/0:7,0:6:15.01:0,15,186	0/0:52,0:15:3.73:0,4,214	0/0:40,0:12:20.27:0,20,116	0/0:29,0:29:84.02:0,84,1019	0/0:19,0:18:42.08:0,42,532	0/0:15,0:15:32.24:0,32,419	0/0:37,0:34:86.56:0,87,832	0/0:18,0:17:51.12:0,51,622	0/0:29,0:26:75.15:0,75,960	0/0:22,0:21:51.35:0,51,783	0/0:18,0:18:36.10:0,36,572	0/0:13,0:13:23.93:0,24,357	0/0:17,0:16:45.12:0,45,589	0/1:20,8:26:9.25:252,0,9	0/1:14,0:14:1.95:63,0,2	0/0:26,0:23:44.31:0,44,269	0/1:8,8:15:26.66:211,0,27	0/0:24,0:19:57.09:0,57,730	0/0:19,0:19:56.88:0,57,682	0/0:20,0:19:51.14:0,51,662	0/0:16,0:16:45.02:0,45,528	0/0:14,0:14:29.90:0,30,423	0/0:26,0:26:53.15:0,53,675	1/1:13,2:15:8.96:119,9,0	0/1:25,0:24:31.28:143,0,31	1/1:16,2:18:22.82:192,23,0	1/1:9,0:9:1.08:78,1,0
chr10	4968390	.	AAAAAC	A	1181.14	PASS	AB=0.875;AC=8;AF=0.143;AN=56;BaseQRankSum=8.778;DP=614;FS=0.000;HRun=0;HaplotypeScore=157.8136;InbreedingCoeff=0.7316;MQ=61.22;MQ0=22;MQRankSum=-7.092;QD=12.30;ReadPosRankSum=1.326;VQSLOD=3.0871;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:31:73.42:0,73,710	0/0:5,0:5:15.01:0,15,400	0/0:52,0:16:20.09:0,20,375	0/0:42,0:13:25.29:0,25,371	0/0:29,0:29:79.34:0,79,2089	0/0:18,0:17:42.09:0,42,1125	0/0:14,0:14:42.13:0,42,981	0/0:38,0:35:25.73:0,26,1074	0/0:18,0:17:51.17:0,51,1267	0/0:29,0:26:78.21:0,78,2083	0/0:21,0:21:63.17:0,63,1840	0/0:19,0:19:44.80:0,45,1336	0/0:13,0:13:33.07:0,33,880	0/0:17,0:16:45.15:0,45,1368	1/1:21,5:24:47.95:485,48,0	0/1:10,5:15:6.98:234,0,7	0/1:24,0:21:23.62:24,0,287	1/1:13,2:14:30.18:257,30,0	0/0:25,0:20:57.17:0,57,1530	0/0:21,0:21:52.88:0,53,1432	0/0:20,0:19:51.17:0,51,1495	0/0:15,0:15:42.12:0,42,1116	0/0:14,0:14:39.12:0,39,1051	0/0:23,0:23:51.04:0,51,1492	1/1:10,6:16:34.96:335,35,0	0/0:25,0:24:63.17:0,63,688	0/0:18,0:18:40.94:0,41,371	0/0:9,0:9:23.69:0,24,264
chr10	4968392	.	AAAC	A	1616.04	PASS	AB=1.000;AC=14;AF=0.250;AN=56;BaseQRankSum=8.826;DP=611;FS=0.448;HRun=0;HaplotypeScore=135.6164;InbreedingCoeff=0.4441;MQ=63.32;MQ0=21;MQRankSum=-8.290;QD=7.48;ReadPosRankSum=1.098;VQSLOD=3.0365;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:32,0:30:10.96:11,0,96	0/0:5,0:5:15.01:0,15,289	0/0:51,0:16:31.87:0,32,338	0/0:44,0:15:17.05:0,17,274	0/0:30,0:30:74.23:0,74,1498	0/0:17,0:16:36.11:0,36,788	0/0:13,0:13:38.95:0,39,646	0/1:36,0:33:32.74:33,0,519	0/0:18,0:17:51.15:0,51,925	0/0:30,0:27:78.20:0,78,1491	0/0:20,0:20:60.20:0,60,1284	0/0:19,0:19:48.99:0,49,894	0/0:13,0:13:36.06:0,36,659	0/0:16,0:16:45.15:0,45,974	1/1:22,4:24:49.64:597,50,0	1/1:13,1:14:14.48:335,14,0	0/1:25,0:22:11.75:12,0,150	1/1:14,1:14:23.45:352,23,0	0/0:27,0:22:63.01:0,63,1133	0/0:22,0:22:45.36:0,45,992	0/0:20,0:19:50.96:0,51,1038	0/0:15,0:15:42.11:0,42,809	0/0:13,0:13:36.11:0,36,714	0/0:22,0:22:51.14:0,51,1061	1/1:15,1:16:44.53:408,45,0	0/1:25,0:24:26.18:26,0,128	0/1:18,0:18:8.10:8,0,51	0/1:9,0:9:13.06:13,0,18
chr10	4968394	.	AC	A	1512.15	PASS	AB=0.842;AC=11;AF=0.196;AN=56;BaseQRankSum=7.150;DP=595;FS=0.407;HRun=2;HaplotypeScore=114.3604;InbreedingCoeff=0.8681;MQ=65.38;MQ0=18;MQRankSum=-8.222;QD=12.29;ReadPosRankSum=-0.999;VQSLOD=1.9485;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:30:49.16:0,49,338	0/0:5,0:5:12.04:0,12,151	0/0:43,2:14:21.48:0,21,233	0/0:43,0:16:9.13:0,9,233	0/0:30,0:30:64.29:0,64,754	0/0:16,0:15:33.09:0,33,416	0/0:13,0:13:21.74:0,22,315	0/1:26,2:29:16.74:226,0,17	0/0:18,0:17:28.51:0,29,474	0/0:28,0:26:56.03:0,56,786	0/0:20,0:20:60.06:0,60,722	0/0:19,0:19:17.45:0,17,467	0/0:13,0:13:32.91:0,33,360	0/0:16,0:16:42.05:0,42,530	1/1:23,1:23:60.69:404,61,0	1/1:13,0:13:35.88:241,36,0	1/1:23,0:21:45.05:274,45,0	1/1:14,0:13:35.62:243,36,0	0/0:23,0:20:55.81:0,56,645	0/0:22,0:23:53.88:0,54,602	0/0:22,0:21:55.67:0,56,666	0/0:16,0:16:44.89:0,45,481	0/0:12,0:12:35.93:0,36,382	0/0:22,0:22:31.13:0,31,558	1/1:13,3:16:44.30:302,44,0	0/0:25,0:24:54.23:0,54,312	0/0:17,0:17:33.71:0,34,181	0/0:13,0:13:33.84:0,34,200
chr10	4969196	.	T	TTCTA	4983.12	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-10.457;DP=678;FS=24.919;HRun=0;HaplotypeScore=104.4565;InbreedingCoeff=0.9985;MQ=90.42;MQ0=0;MQRankSum=-2.859;QD=63.89;ReadPosRankSum=4.329;VQSLOD=4.3790;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,147,2680	0/0:8,0:8:21.07:0,21,385	0/0:28,0:28:69.21:0,69,1169	0/0:24,0:24:66.06:0,66,1123	0/0:21,0:21:60.20:0,60,1062	0/0:31,0:31:75.23:0,75,1331	0/0:22,0:22:63.19:0,63,1100	0/0:30,0:30:72.24:0,72,1310	0/0:22,0:22:60.21:0,60,1101	0/0:20,0:20:54.19:0,54,1007	0/0:13,0:13:39.10:0,39,637	0/0:29,0:29:84.27:0,84,1536	0/0:32,0:32:96.33:0,96,1774	0/0:22,0:22:60.21:0,60,1120	1/1:1,19:21:48.16:1273,48,0	1/1:3,13:16:39.13:1034,39,0	0/0:31,0:31:84.24:0,84,1500	1/1:1,24:27:69.24:1827,69,0	0/0:26,0:26:78.26:0,78,1409	0/0:33,0:33:93.27:0,93,1628	0/0:21,0:21:57.20:0,57,1064	0/0:20,0:20:51.17:0,51,939	0/0:21,0:21:57.20:0,57,1064	0/0:26,0:26:69.20:0,69,1224	1/1:2,11:14:33.11:849,33,0	0/0:42,0:42:99:0,123,2177	0/0:18,0:18:54.17:0,54,976	0/0:9,0:9:27.09:0,27,504
chr10	4969602	.	ATTTTC	A	2542.75	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=6.323;DP=509;FS=13.206;HRun=0;HaplotypeScore=102.5897;InbreedingCoeff=0.9492;MQ=79.77;MQ0=3;MQRankSum=-3.907;QD=20.34;ReadPosRankSum=1.283;VQSLOD=2.5774;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,1:35:29.90:469,30,0	0/0:3,0:3:9.03:0,9,199	0/0:25,0:19:37.20:0,37,652	0/0:22,0:16:5.61:0,6,158	0/0:31,0:31:81.17:0,81,1581	0/0:16,0:16:48.15:0,48,1006	0/0:25,0:25:66.97:0,67,1254	0/0:17,0:17:39.99:0,40,705	0/0:21,0:21:45.06:0,45,872	0/0:24,0:24:51:0,51,867	0/0:11,0:11:30.09:0,30,652	0/0:26,0:26:69.01:0,69,1151	0/0:18,0:18:35.92:0,36,657	0/0:17,0:17:42.05:0,42,791	1/1:0,16:16:12:204,12,0	1/1:0,7:8:18.06:343,18,0	0/0:30,0:30:50.93:0,51,799	1/1:14,4:18:40.62:548,41,0	0/0:20,0:20:51.11:0,51,1072	0/0:25,0:25:63.09:0,63,1203	0/0:4,0:4:12.04:0,12,280	0/0:14,0:14:36.07:0,36,659	0/0:19,0:19:39.06:0,39,764	0/0:16,0:16:39.06:0,39,763	1/1:1,10:12:8.99:131,9,0	1/1:0,1:18:53.53:488,54,0	1/1:7,0:10:30.03:336,30,0	1/1:5,1:8:21.01:227,21,0
chr10	4969809	.	GAC	G	217.15	PASS	AB=0.893;AC=10;AF=0.185;AN=54;BaseQRankSum=2.208;DP=662;FS=4.045;HRun=0;HaplotypeScore=100.6569;InbreedingCoeff=-0.2416;MQ=67.09;MQ0=10;MQRankSum=2.828;QD=0.98;ReadPosRankSum=-0.203;VQSLOD=1.4893;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:44:5.98:0,6,47	0/0:11,0:11:11.94:0,12,125	0/0:41,0:26:6.02:0,6,88	./.	0/1:13,2:15:9.42:9,0,213	0/1:25,0:25:2.26:2,0,392	0/1:20,6:26:99:121,0,402	0/1:23,0:22:0.52:1,0,253	0/0:16,3:18:5.73:0,6,456	0/0:25,1:26:1.87:0,2,411	0/1:10,5:15:12.23:12,0,204	0/0:22,5:27:11.79:0,12,506	0/1:15,1:16:81.75:82,0,115	0/1:17,3:20:0.18:0,0,398	0/0:22,0:24:14.96:0,15,121	0/0:13,0:22:8.37:0,8,76	0/0:26,0:38:6.48:0,6,70	0/0:12,0:17:12.23:0,12,84	0/1:24,0:24:61.68:62,0,215	0/0:17,0:17:23.72:0,24,281	0/1:34,6:40:15.62:16,0,463	0/1:13,4:17:34.19:34,0,230	0/0:9,0:13:9.01:0,9,98	0/0:15,0:33:42.03:0,42,443	0/0:13,0:15:3:0,3,26	0/0:20,0:26:38.96:0,39,358	0/0:11,0:20:15.43:0,15,124	0/0:13,0:16:14.85:0,15,109
chr10	4970551	.	AT	A	2598.55	PASS	AB=0.852;AC=21;AF=0.375;AN=56;BaseQRankSum=13.797;DP=546;FS=8.769;HRun=13;HaplotypeScore=72.3551;InbreedingCoeff=0.6997;MQ=73.65;MQ0=1;MQRankSum=1.045;QD=10.15;ReadPosRankSum=2.978;VQSLOD=2.7412;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,26:31:74.56:544,75,0	0/0:3,0:3:3:0,3,29	0/0:18,0:12:6.27:0,6,39	0/0:12,0:8:2.17:0,2,28	0/1:13,3:16:29.66:30,0,221	0/0:23,2:26:28.12:0,28,578	0/0:22,0:23:56.89:0,57,526	0/0:22,2:24:1.01:0,1,300	0/0:21,0:21:57.07:0,57,544	0/0:18,0:18:35.08:0,35,320	0/1:8,3:11:35.71:36,0,159	0/0:20,0:20:42.04:0,42,393	0/0:24,0:24:65.89:0,66,602	0/1:11,1:13:1.07:1,0,132	1/1:20,0:20:14.10:125,14,0	1/1:29,0:29:55.58:252,56,0	1/1:3,14:17:17.94:223,18,0	1/1:20,0:20:45.93:194,46,0	0/0:25,0:25:34.76:0,35,289	0/0:12,1:13:17.06:0,17,293	0/0:21,2:23:28.47:0,28,394	0/0:7,0:7:18:0,18,161	0/0:14,0:14:29.87:0,30,272	0/0:18,0:19:47.91:0,48,451	1/1:24,0:24:43.35:186,43,0	1/1:3,18:21:21.43:286,21,0	1/1:1,34:36:86.49:630,86,0	1/1:1,15:18:42.84:295,43,0
chr10	4970563	.	T	TA	1670	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=5.335;DP=542;FS=8.579;HRun=0;HaplotypeScore=75.7520;InbreedingCoeff=0.8688;MQ=72.31;MQ0=1;MQRankSum=-0.841;QD=17.77;ReadPosRankSum=2.808;VQSLOD=5.5569;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:80.12:0,80,413	0/0:1,0:1:3.01:0,3,41	0/0:17,0:11:4.43:0,4,65	0/0:12,0:7:2.39:0,2,39	0/0:17,0:17:47.90:0,48,514	0/0:28,0:28:77.70:0,78,980	0/0:20,0:20:57.17:0,57,752	0/0:30,0:30:81.03:0,81,868	0/0:23,0:23:68.87:0,69,861	0/0:16,0:16:45.12:0,45,557	0/0:12,0:12:35.88:0,36,363	0/0:21,0:21:60:0,60,700	0/0:24,0:24:66.14:0,66,870	0/0:9,0:9:23.59:0,24,263	1/1:4,16:20:23.93:337,24,0	1/1:3,24:27:44.15:563,44,0	0/0:18,0:18:44.33:0,44,295	1/1:3,19:22:38.84:461,39,0	0/0:17,0:17:45.06:0,45,545	0/0:14,0:14:40.56:0,41,452	0/0:19,0:19:36.72:0,37,620	0/0:6,0:6:18.05:0,18,230	0/0:14,0:14:38.12:0,38,465	0/0:19,0:19:52.53:0,53,693	1/1:3,22:25:39.93:467,40,0	0/0:23,0:23:58.42:0,58,306	0/0:41,0:41:96.78:0,97,525	0/0:17,0:17:43.12:0,43,229
chr10	4970819	.	CATAAAATAAAATAAAATAAA	C	4645.84	PASS	AB=0.929;AC=16;AF=0.320;AN=50;BaseQRankSum=8.123;DP=450;FS=2.579;HRun=0;HaplotypeScore=204.9848;InbreedingCoeff=0.6864;MQ=67.53;MQ0=4;MQRankSum=-6.501;QD=24.45;ReadPosRankSum=3.992;VQSLOD=3.9140;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:16,8:24:6.02:321,6,0	0/0:8,0:8:9.03:0,9,706	0/1:11,0:8:0.69:1,0,101	0/0:34,0:16:14.15:0,14,277	0/0:11,0:11:18.06:0,18,1057	0/0:18,0:18:36.12:0,36,3069	0/0:11,0:11:9.03:0,9,682	0/0:39,0:39:75.24:0,75,5091	0/0:7,0:7:3.01:0,3,280	0/0:12,0:12:15.05:0,15,920	./.	0/0:17,0:17:18.06:0,18,1395	0/0:13,0:13:21.07:0,21,1603	0/0:10,0:10:9.03:0,9,727	1/1:17,4:21:6.02:321,6,0	0/1:10,0:12:18.46:95,0,18	0/0:19,0:19:45.15:0,45,3794	1/1:23,15:36:9.03:481,9,0	0/0:22,0:21:24.08:0,24,1650	0/0:10,0:10:9.01:0,9,349	./.	./.	0/0:9,0:8:15.05:0,15,1160	0/0:7,0:7:6.02:0,6,561	1/1:6,8:14:14.97:636,15,0	1/1:15,8:23:18.02:706,18,0	1/1:18,23:41:32.89:1764,33,0	1/1:3,3:6:6.02:321,6,0
chr10	4971433	.	CT	C	2859.43	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=10.337;DP=655;FS=3.214;HRun=4;HaplotypeScore=61.6630;InbreedingCoeff=0.9996;MQ=81.27;MQ0=1;MQRankSum=-1.631;QD=29.79;ReadPosRankSum=3.608;VQSLOD=3.9222;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,114,1569	0/0:15,0:15:38.72:0,39,513	0/0:21,0:19:51.11:0,51,644	0/0:17,0:17:36:0,36,481	0/0:22,0:22:66.21:0,66,908	0/0:19,0:19:51.14:0,51,680	0/0:25,0:25:75.24:0,75,1032	0/0:27,0:27:69.22:0,69,952	0/0:29,0:29:78.24:0,78,1059	0/0:30,0:30:84.28:0,84,1172	0/0:13,0:13:39.09:0,39,509	0/0:33,0:33:96.31:0,96,1327	0/0:32,0:32:90.27:0,90,1212	0/0:20,0:20:60.18:0,60,809	1/1:0,35:35:93.29:1116,93,0	1/1:0,24:24:66.20:792,66,0	0/0:22,0:22:66.22:0,66,923	1/1:4,20:24:60.18:720,60,0	0/0:24,0:24:66.17:0,66,869	0/0:10,0:10:30.06:0,30,370	0/0:14,0:14:39.07:0,39,505	0/0:14,0:14:42.13:0,42,573	0/0:16,0:16:45.14:0,45,608	0/0:24,0:24:66.22:0,66,923	1/1:1,12:13:33.10:393,33,0	0/0:39,0:39:99:0,99,1356	0/0:38,0:38:99:0,114,1579	0/0:12,0:12:33.11:0,33,462
chr10	4973706	.	GAGAGGAGAAAAC	G	11201.54	PASS	AB=0.578;AC=15;AF=0.268;AN=56;BaseQRankSum=15.266;DP=607;FS=2.942;HRun=0;HaplotypeScore=210.6672;InbreedingCoeff=0.8861;MQ=77.03;MQ0=0;MQRankSum=-15.499;QD=76.20;ReadPosRankSum=3.837;VQSLOD=4.3005;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,17:29:33.11:1168,33,0	0/0:8,0:8:24.08:0,24,1355	0/0:19,0:19:51.14:0,51,2508	0/0:24,0:24:69.24:0,69,3525	0/0:21,0:21:51.17:0,51,2667	0/0:19,0:19:54.19:0,54,3070	0/0:22,0:22:60.21:0,60,3441	0/0:38,0:38:99:0,105,5858	0/0:21,0:21:54.19:0,54,3248	0/0:26,0:26:66.23:0,66,3630	0/0:15,0:15:42.14:0,42,2325	0/0:33,0:33:99:0,99,5886	0/0:24,0:24:69.24:0,69,4026	0/0:32,0:32:87.30:0,87,4735	1/1:1,16:17:42.10:1415,42,0	1/1:2,16:18:48.13:1713,48,0	0/0:32,0:32:93.32:0,93,4895	1/1:4,4:8:6.02:226,6,0	0/0:16,0:16:48.16:0,48,2566	0/0:19,0:19:51.18:0,51,3008	0/0:33,0:33:93.31:0,93,5322	0/0:21,0:21:57.20:0,57,3343	0/0:10,0:10:24.08:0,24,1211	0/0:27,0:27:75.24:0,75,3921	1/1:4,20:24:60.21:2256,60,0	0/1:7,19:26:99:1829,0,127	1/1:2,18:20:54.19:2031,54,0	1/1:0,5:5:15.05:564,15,0
chr10	4973870	.	CAAATAA	C	5958.56	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=13.769;DP=579;FS=21.340;HRun=0;HaplotypeScore=114.9859;InbreedingCoeff=0.9699;MQ=83.16;MQ0=0;MQRankSum=-13.927;QD=41.09;ReadPosRankSum=2.070;VQSLOD=3.3163;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,14:18:26.92:502,27,0	0/0:7,0:7:21.07:0,21,728	0/0:23,0:23:35.61:0,36,1455	0/0:15,0:15:39.13:0,39,1290	0/0:37,0:37:99:0,99,3141	0/0:30,0:30:87.30:0,87,2986	0/0:13,0:13:33.07:0,33,958	0/0:37,0:37:99:0,99,3182	0/0:20,0:20:54.19:0,54,1855	0/0:25,0:25:75.26:0,75,2559	0/0:24,0:24:69.15:0,69,2180	0/0:24,0:24:66.23:0,66,2253	0/0:23,0:23:60.19:0,60,1944	0/0:19,0:19:51.18:0,51,1731	1/1:1,11:12:21.07:470,21,0	1/1:2,11:13:30.10:671,30,0	0/0:28,0:28:78.27:0,78,2644	1/1:3,7:10:6.02:134,6,0	0/0:24,0:24:63.22:0,63,2026	0/0:20,0:20:57.20:0,57,1962	0/0:5,0:5:12.03:0,12,306	0/0:26,0:26:72.25:0,72,2493	0/0:25,0:25:60.21:0,60,2049	0/0:9,0:9:24.08:0,24,831	1/1:3,33:36:81.28:1811,81,0	1/1:2,13:15:35.93:761,36,0	1/1:2,26:28:60.20:1342,60,0	1/1:0,13:13:12.04:268,12,0
chr10	4974674	.	AGAGGCTTTGGAAGAGAAGGTCTG	A	2586.23	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.129;DP=647;FS=21.494;HRun=0;HaplotypeScore=397.9556;InbreedingCoeff=0.9812;MQ=86.31;MQ0=0;MQRankSum=-6.651;QD=55.03;ReadPosRankSum=-0.458;VQSLOD=1.3615;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:16,13:29:33.14:1955,33,0	0/0:7,0:7:21.07:0,21,2057	0/0:25,0:25:66.01:0,66,3476	0/0:22,0:22:60.21:0,60,3521	0/0:39,0:39:99:0,105,9057	0/0:32,0:32:84.29:0,84,7619	0/0:23,0:23:66.22:0,66,6118	0/0:23,0:23:60.18:0,60,4811	0/0:23,0:23:69.24:0,69,6826	0/0:21,0:21:54.18:0,54,4698	0/0:23,0:23:66.23:0,66,5563	0/0:26,0:26:72.25:0,72,7229	0/0:20,0:20:54.19:0,54,5322	0/0:32,0:32:93.31:0,93,8507	0/0:22,0:22:60.21:0,60,5712	0/0:17,0:17:51.17:0,51,4844	1/1:12,6:18:12.04:748,12,0	0/0:20,0:20:57.20:0,57,4897	0/0:17,0:17:46.40:0,46,4087	0/0:24,0:24:63.20:0,63,5206	0/0:35,0:35:99:0,102,9078	0/0:23,0:23:69.23:0,69,6140	0/0:17,0:17:45.15:0,45,4144	0/0:29,0:29:81.28:0,81,8102	0/0:17,0:17:48.12:0,48,4346	0/0:27,0:27:69.23:0,69,5741	0/0:26,0:26:72.21:0,72,6416	0/0:10,0:10:27.09:0,27,2349
chr10	4974999	.	TAAA	T	4563.67	PASS	AB=0.532;AC=15;AF=0.268;AN=56;BaseQRankSum=7.229;DP=664;FS=0.364;HRun=14;HaplotypeScore=105.1891;InbreedingCoeff=0.9044;MQ=79.88;MQ0=0;MQRankSum=-2.893;QD=21.94;ReadPosRankSum=5.223;VQSLOD=3.9802;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,37:44:89.81:1011,90,0	0/0:8,0:8:21.07:0,21,378	0/0:26,0:24:19.18:0,19,356	0/0:17,0:16:14.89:0,15,187	0/0:32,0:33:96.31:0,96,1730	0/0:29,0:30:72.25:0,72,1328	0/0:15,0:15:42.13:0,42,759	0/0:34,0:36:75.25:0,75,1342	0/0:23,0:25:72.23:0,72,1304	0/0:15,0:17:39.08:0,39,624	0/0:13,0:18:49.37:0,49,785	0/0:16,0:18:45.11:0,45,777	0/0:19,0:21:51.13:0,51,851	0/0:25,0:25:60.20:0,60,1040	1/1:3,19:22:51.13:594,51,0	0/1:3,1:25:37.32:37,0,44	0/0:7,0:29:64.07:0,64,528	1/1:6,19:27:54.01:614,54,0	0/0:14,0:14:36.10:0,36,616	0/0:21,0:23:60.18:0,60,1029	0/0:27,0:29:66.23:0,66,1214	0/0:17,0:20:45.12:0,45,767	0/0:24,0:26:69.23:0,69,1221	0/0:17,0:22:60.16:0,60,1024	1/1:2,19:21:45.11:525,45,0	1/1:4,20:24:60.12:700,60,0	1/1:3,25:30:58.61:679,59,0	1/1:3,11:15:36.02:404,36,0
chr10	4975278	.	GC	G	3812.89	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=12.766;DP=697;FS=0.851;HRun=1;HaplotypeScore=91.2049;InbreedingCoeff=0.9988;MQ=78.52;MQ0=0;MQRankSum=-3.424;QD=38.51;ReadPosRankSum=1.926;VQSLOD=4.1440;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,123,1901	0/0:15,0:15:45.15:0,45,718	0/0:22,0:22:66.12:0,66,952	0/0:20,0:19:54.18:0,54,845	0/0:11,0:11:33.11:0,33,527	0/0:26,0:26:78.25:0,78,1217	0/0:33,0:33:99:0,99,1554	0/0:26,0:26:72.20:0,72,1101	0/0:22,0:22:66.14:0,66,973	0/0:26,0:26:78.20:0,78,1184	0/0:7,0:7:21.07:0,21,335	0/0:29,0:29:87.28:0,87,1358	0/0:28,0:28:81.28:0,81,1288	0/0:39,0:39:99:0,117,1843	1/1:0,28:28:78.26:1089,78,0	1/1:0,18:18:51.17:713,51,0	0/0:45,0:45:99:0,129,1993	1/1:0,26:26:72.24:1004,72,0	0/0:18,0:18:53.99:0,54,798	0/0:17,0:17:47.75:0,48,765	0/0:40,0:40:99:0,117,1813	0/0:23,0:23:66.22:0,66,1035	0/0:18,0:18:51.17:0,51,814	0/0:37,0:37:99:0,111,1691	1/1:0,27:27:72.24:1007,72,0	0/0:25,0:25:75.25:0,75,1176	0/0:17,0:17:51.17:0,51,812	0/0:12,0:12:36.12:0,36,574
chr10	4979224	.	GA	G	658.20	PASS	AB=0.917;AC=4;AF=0.071;AN=56;BaseQRankSum=6.794;DP=758;FS=3.319;HRun=11;HaplotypeScore=80.3353;InbreedingCoeff=0.3979;MQ=73.02;MQ0=0;MQRankSum=0.402;QD=8.66;ReadPosRankSum=1.982;VQSLOD=2.9014;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,1:35:65.55:0,66,887	0/0:16,1:17:20.44:0,20,412	0/1:18,1:17:29.63:30,0,66	0/0:14,1:14:18.26:0,18,144	0/0:37,1:38:65.41:0,65,879	0/0:19,0:19:51.13:0,51,544	0/1:19,3:23:16.97:17,0,430	0/0:39,1:40:71.57:0,72,951	0/0:21,0:21:57.14:0,57,602	0/0:28,1:29:41.51:0,42,641	0/0:21,0:22:32.85:0,33,519	0/0:30,0:31:90.02:0,90,916	0/0:25,1:27:47.36:0,47,686	0/0:13,0:13:36.09:0,36,384	0/0:40,2:43:89.45:0,89,1127	0/0:25,0:28:71.86:0,72,719	1/1:0,32:34:90.98:726,91,0	0/0:27,0:28:60.01:0,60,615	0/0:27,0:29:65.78:0,66,644	0/0:32,3:35:7.72:0,8,676	0/0:14,0:14:33.08:0,33,352	0/0:35,0:38:80.68:0,81,795	0/0:31,2:33:59.54:0,60,824	0/0:26,1:27:53.52:0,54,760	0/0:15,0:15:27.07:0,27,288	0/0:45,2:48:74.32:0,74,1157	0/0:34,0:34:84.14:0,84,872	0/0:3,0:3:3.01:0,3,32
chr10	4980833	.	CACA	C	6841.09	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=15.567;DP=713;FS=13.698;HRun=0;HaplotypeScore=97.2326;InbreedingCoeff=0.9997;MQ=76.16;MQ0=0;MQRankSum=-2.418;QD=32.27;ReadPosRankSum=2.598;VQSLOD=4.7277;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,15:18:42.06:595,42,0	0/0:14,0:14:30.10:0,30,598	0/0:23,0:23:39.13:0,39,732	0/0:22,0:22:51.13:0,51,929	0/0:24,0:24:72.23:0,72,1460	0/0:26,0:26:69.24:0,69,1428	0/0:16,0:16:39.13:0,39,813	0/0:34,0:34:78.26:0,78,1574	0/0:31,0:31:81.28:0,81,1649	0/0:28,0:28:75.26:0,75,1564	0/0:38,0:38:90.31:0,90,1865	0/0:28,0:28:69.22:0,69,1381	0/0:23,0:23:63.22:0,63,1296	0/0:24,0:24:60.21:0,60,1208	1/1:5,28:33:60.20:890,60,0	1/1:4,25:29:63.21:928,63,0	0/0:21,0:21:57.19:0,57,1120	1/1:9,21:30:44.89:667,45,0	0/0:25,0:25:57.20:0,57,1158	0/0:34,0:34:84.27:0,84,1701	0/0:19,0:19:48.15:0,48,938	0/0:26,0:26:66.19:0,66,1282	0/0:29,0:29:78.27:0,78,1581	0/0:16,0:16:33.11:0,33,688	1/1:4,29:33:78.26:1157,78,0	1/1:3,22:25:66.21:955,66,0	1/1:6,29:35:84.28:1246,84,0	1/1:0,9:9:27.09:401,27,0
chr10	4982916	.	T	TAC	2681.91	PASS	AB=0.547;AC=7;AF=0.125;AN=56;BaseQRankSum=-10.865;DP=835;FS=19.574;HRun=0;HaplotypeScore=96.9214;InbreedingCoeff=0.7304;MQ=63.06;MQ0=9;MQRankSum=0.205;QD=24.60;ReadPosRankSum=2.277;VQSLOD=3.2155;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:41:77.84:0,78,870	0/0:21,0:22:54.16:0,54,644	0/0:38,0:11:11.87:0,12,120	0/0:33,0:14:2.77:0,3,17	0/0:34,0:34:96.11:0,96,1127	0/0:30,0:30:81.25:0,81,981	0/0:19,0:19:39.12:0,39,473	0/0:42,0:42:75.02:0,75,1042	0/0:28,0:28:63.19:0,63,763	0/0:39,0:40:93.09:0,93,1077	0/0:17,0:17:42.11:0,42,488	0/0:36,0:37:83.96:0,84,973	0/0:32,0:32:86.73:0,87,1006	0/0:25,0:27:66.02:0,66,765	1/1:6,24:30:5.75:593,6,0	0/1:5,24:29:42.76:853,0,43	0/0:25,0:25:57.12:0,57,662	1/1:10,20:31:11.34:792,11,0	0/0:14,0:15:30.79:0,31,319	0/0:29,0:29:75.14:0,75,885	0/0:39,0:39:85.33:0,85,1201	0/0:34,0:35:88.25:0,88,1028	0/0:26,0:27:56.99:0,57,656	0/0:21,0:21:49.64:0,50,555	1/1:4,13:19:36.12:581,36,0	0/0:41,0:42:99:0,111,1296	0/0:37,0:38:90.08:0,90,1033	0/0:14,0:14:39.09:0,39,457
chr10	4991861	.	C	CTA	12600.83	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-18.575;DP=828;FS=0.285;HRun=0;HaplotypeScore=90.4421;InbreedingCoeff=0.9998;MQ=85.46;MQ0=0;MQRankSum=-1.757;QD=49.81;ReadPosRankSum=6.006;VQSLOD=5.6180;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,67:71:99:3592,186,0	0/0:11,0:11:33.07:0,33,441	0/0:27,0:27:75.24:0,75,1073	0/0:26,0:26:59.83:0,60,839	0/0:23,0:23:66.21:0,66,989	0/0:19,0:19:54.18:0,54,823	0/0:27,0:27:81.28:0,81,1237	0/0:46,0:46:99:0,129,1916	0/0:25,0:25:75.25:0,75,1148	0/0:39,0:39:99:0,111,1699	0/0:17,0:17:51.17:0,51,780	0/0:38,0:38:99:0,111,1666	0/0:36,0:36:99:0,102,1540	0/0:35,0:35:99:0,102,1551	1/1:2,33:35:93.32:1796,93,0	1/1:2,29:31:32.33:1403,32,0	0/0:40,0:40:99:0,120,1837	1/1:0,15:15:39.13:753,39,0	0/0:27,0:27:77.06:0,77,1125	0/0:23,0:23:69.19:0,69,992	0/0:38,0:38:99:0,111,1678	0/0:26,0:26:75.25:0,75,1147	0/0:17,0:17:51.17:0,51,781	0/0:35,0:35:99:0,105,1602	1/1:1,19:20:57.20:1101,57,0	1/1:4,39:43:31.52:2160,32,0	1/1:0,24:24:54.19:1042,54,0	1/1:1,13:14:39.13:753,39,0
chr10	4993514	.	G	GT	774.96	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-5.708;DP=660;FS=3.678;HRun=7;HaplotypeScore=64.8546;InbreedingCoeff=0.9882;MQ=71.30;MQ0=0;MQRankSum=1.067;QD=25.00;ReadPosRankSum=1.841;VQSLOD=4.4395;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:81.07:0,81,766	0/0:12,0:12:36.06:0,36,347	0/0:27,0:24:40.94:0,41,374	0/0:18,0:16:18.54:0,19,266	0/0:29,0:29:84.11:0,84,804	0/0:20,0:20:51.08:0,51,492	0/0:18,0:18:45.07:0,45,435	0/0:23,0:23:63.10:0,63,608	0/0:24,0:24:57.09:0,57,548	0/0:28,0:28:78.10:0,78,747	0/0:28,0:28:78.12:0,78,753	0/0:33,0:33:84.09:0,84,800	0/0:22,0:22:57.07:0,57,540	0/0:25,0:25:75.12:0,75,724	0/0:23,0:23:60.08:0,60,574	0/0:10,0:10:30.03:0,30,284	1/1:2,29:31:72.22:870,72,0	0/0:18,0:18:51.06:0,51,486	0/0:25,0:25:60.09:0,60,579	0/0:30,0:30:81.10:0,81,777	0/0:18,0:18:48.05:0,48,453	0/0:26,0:26:72.11:0,72,695	0/0:24,0:24:66.10:0,66,637	0/0:32,0:32:87.09:0,87,825	0/0:24,0:24:72.10:0,72,690	0/0:20,0:20:42.06:0,42,406	0/0:34,0:34:96.15:0,96,923	0/0:10,0:10:21.03:0,21,203
chr10	4995718	.	CTCTCTT	C	489.03	PASS	AB=1.000;AC=20;AF=0.400;AN=50;BaseQRankSum=-2.608;DP=405;FS=19.602;HRun=0;HaplotypeScore=113.6852;InbreedingCoeff=-0.3713;MQ=43.69;MQ0=31;MQRankSum=4.161;QD=1.87;ReadPosRankSum=3.308;VQSLOD=0.9831;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:25:8.69:0,9,436	0/1:6,0:6:27.32:47,0,27	./.	./.	0/1:18,0:16:55.49:55,0,184	0/1:15,0:14:4.41:4,0,87	0/0:16,0:12:15.68:0,16,67	0/0:17,0:15:36.63:0,37,252	0/1:12,0:12:6.79:7,0,205	0/1:14,0:13:19.57:20,0,195	0/1:11,0:11:26.30:26,0,99	0/1:13,0:13:21.29:21,0,51	0/0:23,0:21:37.36:0,37,382	0/1:12,0:11:37.53:38,0,136	0/0:22,0:22:7.45:0,7,61	1/1:2,17:19:2.96:19,3,0	0/1:32,0:28:5.07:5,0,148	1/1:8,0:6:3.01:33,3,0	0/1:7,0:5:30.99:31,0,129	0/0:20,0:20:20.61:0,21,267	0/1:14,0:13:7.52:8,0,53	0/0:8,0:8:11.31:0,11,106	0/1:16,0:16:13.46:13,0,122	0/1:24,0:17:46.88:47,0,304	./.	0/1:17,0:17:99:177,0,162	0/1:16,0:13:21.67:57,0,22	0/1:8,0:4:14.01:27,0,14
chr10	4995720	.	CTCTT	C	718.07	PASS	AB=1.000;AC=22;AF=0.440;AN=50;BaseQRankSum=-3.149;DP=404;FS=12.713;HRun=0;HaplotypeScore=107.8986;InbreedingCoeff=-0.3478;MQ=43.80;MQ0=30;MQRankSum=5.767;QD=2.57;ReadPosRankSum=5.032;VQSLOD=1.0109;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:26:16.41:16,0,264	0/1:6,0:6:8.08:25,0,8	./.	./.	0/1:19,0:18:83.69:84,0,124	0/1:15,0:14:9.93:10,0,28	0/0:16,0:12:14.80:0,15,64	0/0:17,0:15:37.35:0,37,252	0/1:12,0:12:11.46:11,0,144	0/1:15,0:14:50.30:50,0,133	0/1:11,0:11:37.73:38,0,62	0/1:13,0:13:21.80:22,0,25	0/0:22,0:20:32.08:0,32,261	0/1:11,0:10:37.79:38,0,64	0/1:22,0:22:13:29,0,13	1/1:19,0:19:2.96:19,3,0	0/0:31,0:27:12.63:0,13,161	1/1:2,6:6:3.01:56,3,0	0/1:7,0:5:30.99:31,0,103	0/0:19,0:19:20.21:0,20,191	0/1:13,0:12:8.31:8,0,29	0/0:9,0:9:11.22:0,11,56	0/1:17,0:17:13.41:13,0,75	0/1:24,0:17:47.35:47,0,181	./.	0/1:16,0:16:91:210,0,91	0/1:16,0:13:18.53:125,0,19	1/1:8,0:4:6.57:37,7,0
chr10	4995723	.	TTTCA	T	540.80	PASS	AB=0.961;AC=18;AF=0.360;AN=50;BaseQRankSum=-2.708;DP=400;FS=1.428;HRun=0;HaplotypeScore=109.6378;InbreedingCoeff=0.0644;MQ=43.81;MQ0=30;MQRankSum=5.430;QD=2.85;ReadPosRankSum=4.389;VQSLOD=1.5097;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:25:12.99:0,13,189	0/0:6,0:6:5.17:0,5,22	./.	./.	0/1:21,0:20:26.25:26,0,109	0/1:13,0:13:8.17:10,0,8	0/0:15,0:11:15.21:0,15,105	0/0:19,0:16:40.57:0,41,293	0/1:12,0:12:1.21:1,0,138	0/1:15,0:14:8.14:8,0,194	0/1:11,0:11:18.71:19,0,73	0/0:12,0:12:5.81:0,6,57	0/0:22,0:20:30.69:0,31,265	0/0:11,0:10:12.49:0,12,63	1/1:22,0:22:7.58:92,8,0	1/1:19,0:19:3.01:37,3,0	0/0:31,0:27:20.96:0,21,135	1/1:8,0:6:3.01:35,3,0	0/1:7,0:5:17.16:17,0,88	0/0:19,0:19:18.67:0,19,113	0/1:13,0:11:15.48:15,0,21	0/1:8,0:8:1.36:1,0,7	0/0:18,0:18:5.72:0,6,82	0/0:21,0:15:9.48:0,9,88	./.	0/1:6,11:17:65.81:211,0,66	0/1:17,0:14:12.87:138,0,13	1/1:7,0:3:6.48:77,6,0
chr10	4995725	.	TCA	T	267.61	PASS	AB=0.944;AC=14;AF=0.304;AN=46;BaseQRankSum=-0.934;DP=415;FS=4.467;HRun=0;HaplotypeScore=105.0073;InbreedingCoeff=0.4010;MQ=43.66;MQ0=30;MQRankSum=1.780;QD=1.73;ReadPosRankSum=0.531;VQSLOD=1.7332;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:24:8.74:0,9,76	0/0:6,0:6:2.96:0,3,25	./.	./.	0/0:20,0:21:14.77:0,15,130	0/0:12,0:12:2.13:0,2,23	0/0:16,0:12:6.01:0,6,69	0/0:25,0:22:17.98:0,18,188	0/0:14,0:14:11.69:0,12,137	0/0:16,0:15:18.43:0,18,184	0/1:11,0:11:4.70:5,0,102	0/0:11,0:11:8.98:0,9,78	0/0:22,0:20:9.48:0,9,87	0/0:11,0:10:11.94:0,12,129	./.	1/1:20,0:20:3.43:20,3,0	0/1:16,15:28:25.94:37,0,26	./.	0/1:7,0:5:2.01:2,0,25	0/1:18,0:19:0:0,0,0	0/1:15,0:12:0.86:1,0,33	0/1:10,0:10:0.38:0,0,0	0/0:18,0:18:8.26:0,8,61	0/0:22,0:17:11.77:0,12,115	./.	1/1:17,0:17:15.01:147,15,0	1/1:17,0:14:12.03:128,12,0	1/1:7,0:3:6.01:60,6,0
chr10	4995766	.	CACACACAA	C	538.39	PASS	AB=0.786;AC=6;AF=0.107;AN=56;BaseQRankSum=0.577;DP=545;FS=4.378;HRun=0;HaplotypeScore=136.6521;InbreedingCoeff=0.6531;MQ=60.94;MQ0=23;MQRankSum=-1.261;QD=6.99;ReadPosRankSum=-1.005;VQSLOD=2.2218;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:17:29.93:0,30,550	0/0:4,0:4:9.01:0,9,234	0/0:25,0:14:35.14:0,35,432	0/0:21,0:14:35.09:0,35,348	0/0:21,0:21:45.02:0,45,914	0/0:13,0:13:23.15:0,23,303	0/0:15,0:14:21.02:0,21,481	0/0:29,0:27:78.21:0,78,1193	0/0:14,0:14:32.80:0,33,757	0/0:22,0:21:60.12:0,60,1318	0/0:15,0:15:36.04:0,36,705	0/0:15,0:15:30.51:0,31,540	0/0:19,0:18:39.94:0,40,750	0/0:16,0:16:42.04:0,42,760	0/1:6,18:24:6.03:42,0,6	0/1:22,0:22:99:162,0,100	0/0:38,0:36:53.78:0,54,698	1/1:11,0:10:19.74:143,20,0	0/0:20,0:19:56.66:0,57,649	0/0:24,0:23:44.32:0,44,628	0/0:18,0:17:35.91:0,36,530	0/0:14,0:14:26.30:0,26,292	0/0:27,0:27:48.45:0,48,670	0/0:25,0:22:44.51:0,45,852	1/1:20,0:20:27.13:327,27,0	0/0:25,0:25:68.75:0,69,948	0/0:19,0:17:50.65:0,51,810	0/0:11,0:9:27.04:0,27,536
chr10	4997332	.	GA	G	5180.91	PASS	AB=0.969;AC=19;AF=0.339;AN=56;BaseQRankSum=11.233;DP=719;FS=25.864;HRun=11;HaplotypeScore=86.0568;InbreedingCoeff=0.8800;MQ=71.85;MQ0=0;MQRankSum=-1.563;QD=17.56;ReadPosRankSum=4.117;VQSLOD=4.0160;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,44:50:81.88:879,82,0	0/0:9,0:9:27.05:0,27,275	0/1:30,1:30:13.43:13,0,294	0/0:28,1:22:2.88:0,3,128	0/0:16,0:17:41.93:0,42,423	0/0:24,0:25:62.99:0,63,654	0/0:23,1:24:32.49:0,32,544	0/0:30,0:30:63.15:0,63,665	0/0:16,0:16:42.11:0,42,448	0/0:31,0:35:68.69:0,69,872	0/0:13,0:13:6.36:0,6,249	0/0:32,0:32:84.20:0,84,889	0/0:24,0:24:63.15:0,63,665	0/0:31,0:31:72.17:0,72,756	1/1:5,26:31:45.92:584,46,0	1/1:5,20:25:62.92:517,63,0	1/1:4,28:32:77.90:640,78,0	1/1:3,32:35:86.90:714,87,0	0/0:14,1:16:14.11:0,14,307	0/0:20,0:20:45.10:0,45,473	0/0:23,0:23:57.13:0,57,601	0/0:25,0:28:77.97:0,78,789	0/0:30,0:30:71.86:0,72,704	0/0:21,1:22:35.55:0,36,573	1/1:1,10:11:29.97:246,30,0	1/1:5,27:32:44.69:577,45,0	1/1:3,29:32:83.89:690,84,0	1/1:2,14:16:38.92:320,39,0
chr10	5001175	.	T	TG	1083.86	PASS	AB=0.771;AC=9;AF=0.161;AN=56;BaseQRankSum=5.658;DP=505;FS=8.088;HRun=10;HaplotypeScore=65.0669;InbreedingCoeff=0.3508;MQ=72.55;MQ0=0;MQRankSum=-0.538;QD=8.03;ReadPosRankSum=1.529;VQSLOD=1.5838;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:13,17:30:34.39:332,0,34	0/0:6,0:6:17.96:0,18,144	0/0:23,0:21:15.83:0,16,179	0/1:15,0:11:19.88:20,0,30	0/0:23,0:23:50.90:0,51,413	0/0:23,0:23:27.79:0,28,317	0/0:21,0:21:53.93:0,54,443	0/0:27,0:27:46.99:0,47,386	0/0:14,0:14:38.95:0,39,320	0/0:18,0:19:44.44:0,44,349	0/0:14,0:14:32.96:0,33,271	0/0:9,0:9:17.96:0,18,144	0/0:12,0:12:32.95:0,33,270	0/0:15,0:15:38.95:0,39,320	0/0:20,0:20:56.90:0,57,463	0/0:19,0:19:44.93:0,45,367	0/0:24,0:25:61.82:0,62,486	0/0:20,0:21:52.91:0,53,415	0/1:16,1:18:0.03:0,0,189	0/0:18,0:18:29.91:0,30,241	1/1:11,11:22:12.02:122,12,0	0/0:19,0:19:44.91:0,45,366	0/0:14,0:16:36.93:0,37,273	0/0:9,0:9:26.97:0,27,222	0/0:17,0:17:44.88:0,45,357	0/1:7,8:15:22.30:171,0,22	0/1:8,13:20:6.86:313,0,7	1/1:2,12:14:5.43:263,5,0
chr10	5005592	.	T	TA	833.41	PASS	AB=0.851;AC=14;AF=0.250;AN=56;BaseQRankSum=-3.235;DP=750;FS=3.755;HRun=15;HaplotypeScore=104.6682;InbreedingCoeff=0.1834;MQ=68.21;MQ0=0;MQRankSum=-0.351;QD=3.35;ReadPosRankSum=-2.874;VQSLOD=0.4371;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:59,0:60:35.24:0,35,413	0/1:7,1:8:16.38:16,0,27	1/1:18,0:12:2.84:10,3,0	0/1:7,0:5:0:0,0,0	0/1:26,5:31:25.06:25,0,169	0/0:26,4:30:25.89:0,26,250	0/0:22,4:26:7.02:0,7,153	0/1:35,0:34:7.34:7,0,136	0/0:24,0:24:25.88:0,26,161	0/0:30,1:33:16.94:0,17,200	0/0:25,0:25:45.74:0,46,274	0/0:25,0:27:8.03:0,8,141	0/0:16,0:16:14.35:0,14,89	0/0:21,0:22:39.96:0,40,237	0/1:9,16:26:38.26:132,0,38	1/1:18,6:24:24.25:282,24,0	0/0:41,2:45:24.65:0,25,363	1/1:9,25:34:25.24:289,25,0	0/1:22,0:22:29.25:29,0,145	0/0:24,2:27:6.08:0,6,124	0/0:22,0:25:30.45:0,30,173	0/0:24,3:27:0.29:0,0,106	0/1:12,3:16:33.92:35,0,34	0/0:31,2:36:17.21:0,17,308	0/1:10,17:26:21.04:164,0,21	0/0:32,0:32:25.02:0,25,160	0/0:27,4:31:2.59:0,3,220	0/0:13,0:13:26.23:0,26,156
chr10	5006359	.	T	TA	2452.98	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-9.719;DP=629;FS=0.448;HRun=8;HaplotypeScore=57.4237;InbreedingCoeff=0.9981;MQ=83.73;MQ0=0;MQRankSum=-0.415;QD=27.56;ReadPosRankSum=1.592;VQSLOD=4.2229;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,105,961	0/0:8,0:8:21.01:0,21,192	0/0:16,0:16:39.01:0,39,354	0/0:21,0:21:44.86:0,45,384	0/0:25,0:25:60:0,60,544	0/0:22,0:22:57:0,57,512	0/0:22,0:22:57.01:0,57,517	0/0:41,0:41:99:0,99,906	0/0:13,0:13:36.02:0,36,329	0/0:26,0:26:72.04:0,72,659	0/0:17,0:17:45.02:0,45,412	0/0:18,0:19:53.04:0,53,468	0/0:18,0:18:54.03:0,54,494	0/0:32,0:32:90.05:0,90,824	1/1:1,22:23:57.17:657,57,0	1/1:0,16:16:39.12:450,39,0	0/0:35,0:35:99:0,102,924	1/1:2,24:26:72.21:831,72,0	0/0:25,0:25:63.01:0,63,571	0/0:23,0:23:57.02:0,57,521	0/0:26,0:26:69.03:0,69,631	0/0:11,0:12:35.04:0,35,303	0/0:13,0:13:33.01:0,33,302	0/0:25,0:25:75.04:0,75,686	1/1:0,24:24:60.11:676,60,0	0/0:30,0:30:78.04:0,78,714	0/0:25,0:25:63:0,63,567	0/0:8,0:8:23.97:0,24,211
chr10	5007151	.	G	GACAA	4978.55	PASS	AB=0.578;AC=9;AF=0.161;AN=56;BaseQRankSum=-1.406;DP=716;FS=0.954;HRun=0;HaplotypeScore=130.5506;InbreedingCoeff=0.9299;MQ=68.74;MQ0=2;MQRankSum=-7.803;QD=41.15;ReadPosRankSum=-1.950;VQSLOD=4.6740;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:69.23:0,69,1106	0/0:12,0:12:27.09:0,27,439	0/0:30,0:30:42.13:0,42,621	0/0:31,0:28:45.14:0,45,697	0/0:27,0:27:51.16:0,51,805	0/0:12,0:13:21.06:0,21,321	0/0:21,0:21:39.13:0,39,618	1/1:15,14:30:60.08:1081,60,0	0/0:21,0:21:48.15:0,48,746	0/0:32,0:32:66.23:0,66,1074	0/0:22,0:22:51.17:0,51,810	0/0:35,0:35:81.28:0,81,1301	0/0:21,0:21:39.13:0,39,634	0/0:34,0:34:78.25:0,78,1245	1/1:5,17:22:45.12:1039,45,0	0/1:7,19:26:0.65:1042,0,1	0/0:32,0:32:59.23:0,59,901	1/1:11,16:26:48.16:1164,48,0	0/0:19,0:19:33.10:0,33,498	0/0:30,0:30:75.25:0,75,1198	0/0:27,0:27:54.17:0,54,846	0/0:27,0:27:57.19:0,57,883	0/0:32,0:32:78.27:0,78,1251	0/0:25,0:24:51.14:0,51,760	1/1:5,11:16:26.84:654,27,0	0/0:34,0:34:78.27:0,78,1254	0/0:22,0:22:48.11:0,48,723	0/0:14,0:14:27.09:0,27,439
chr10	5007192	.	TCC	T	2432.39	PASS	AB=0.852;AC=15;AF=0.268;AN=56;BaseQRankSum=9.731;DP=689;FS=3.440;HRun=5;HaplotypeScore=121.2072;InbreedingCoeff=0.9364;MQ=72.44;MQ0=3;MQRankSum=-6.567;QD=14.48;ReadPosRankSum=-0.165;VQSLOD=0.0166;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:25:50.59:400,51,0	0/0:9,0:9:24.08:0,24,382	0/0:53,0:37:58.32:0,58,1232	0/0:34,0:28:50.69:0,51,725	0/0:29,0:29:81.28:0,81,1400	0/0:16,0:16:48.15:0,48,794	0/0:21,0:21:54.16:0,54,890	0/0:42,0:42:99:0,117,1801	0/0:21,0:21:63.19:0,63,1091	0/0:26,0:26:75.25:0,75,1299	0/0:25,0:25:72.24:0,72,1244	0/0:31,0:31:86.49:0,86,1392	0/0:15,0:15:45.05:0,45,660	0/0:37,0:37:99:0,99,1673	1/1:17,5:22:14.98:218,15,0	1/1:16,4:20:25.21:224,25,0	0/0:28,0:32:77.58:0,78,746	0/1:19,4:23:2.83:251,0,3	0/0:17,0:17:42.12:0,42,702	0/0:24,0:24:69.22:0,69,1161	0/0:22,0:22:57.18:0,57,1009	0/0:23,0:23:69.17:0,69,1146	0/0:22,0:22:63.21:0,63,1089	0/0:20,1:19:30.11:0,30,878	1/1:8,3:11:20.08:189,20,0	1/1:28,0:31:42.27:784,42,0	1/1:17,0:20:41.40:346,41,0	1/1:16,0:16:30.68:218,31,0
chr10	5008834	.	C	CA	2790.27	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-11.844;DP=826;FS=6.308;HRun=9;HaplotypeScore=83.2019;InbreedingCoeff=0.9409;MQ=75.64;MQ0=0;MQRankSum=-2.334;QD=23.85;ReadPosRankSum=0.047;VQSLOD=4.1864;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,43:45:99:1261,114,0	0/0:14,0:15:44.02:0,44,368	0/0:15,0:17:23.52:0,24,218	0/0:16,0:18:31.30:0,31,256	0/0:40,0:40:99:0,105,908	0/0:27,0:27:71.98:0,72,625	0/0:17,0:18:47.02:0,47,397	0/0:33,0:33:77.95:0,78,672	0/0:19,0:20:50:0,50,420	0/0:32,0:32:86.98:0,87,755	0/0:27,0:27:68.78:0,69,595	0/0:34,0:34:99:0,102,885	0/0:42,1:43:77.77:0,78,899	0/0:28,0:28:74.81:0,75,639	0/0:32,0:32:86.93:0,87,745	0/0:33,2:35:29.62:0,30,715	0/0:33,0:35:91.03:0,91,763	0/0:28,0:28:68.95:0,69,599	0/0:27,0:27:62.96:0,63,545	0/0:33,1:34:53.76:0,54,692	0/0:42,0:42:92.94:0,93,803	0/0:25,0:26:68.01:0,68,579	0/0:24,0:24:68.97:0,69,595	0/0:38,0:38:99:0,105,907	0/0:35,1:36:65.80:0,66,800	1/1:6,27:34:61.14:888,61,0	1/1:5,22:27:2.09:479,2,0	1/1:0,10:11:29.91:313,30,0
chr10	5009507	.	AGTGTGT	A	960.23	PASS	AB=0.910;AC=11;AF=0.212;AN=52;BaseQRankSum=4.859;DP=644;FS=4.393;HRun=0;HaplotypeScore=137.3373;InbreedingCoeff=0.5159;MQ=63.75;MQ0=9;MQRankSum=-5.233;QD=5.22;ReadPosRankSum=0.632;VQSLOD=2.5055;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:38:19.80:124,0,20	0/0:10,0:10:12.04:0,12,286	./.	./.	0/0:22,0:22:24.08:0,24,561	0/0:18,0:18:15.52:0,16,312	0/0:20,0:23:20.87:0,21,510	0/1:36,0:35:29.33:47,0,29	0/0:23,0:24:32.73:0,33,794	0/0:15,0:15:30.04:0,30,472	0/0:15,0:15:21.06:0,21,337	0/0:20,0:21:24.07:0,24,572	0/0:22,0:21:27.09:0,27,618	0/0:18,0:20:39.13:0,39,822	1/1:17,4:22:6.02:122,6,0	1/1:7,9:16:5.77:122,6,0	1/1:22,12:33:26.52:544,27,0	0/1:18,0:18:34.45:99,0,34	0/0:21,0:23:15.94:0,16,351	0/0:7,0:11:15.05:0,15,321	0/0:53,0:57:48.14:0,48,1118	0/0:18,0:18:12.04:0,12,229	0/0:10,0:10:6.02:0,6,123	0/0:37,0:41:62.93:0,63,1625	1/1:19,1:19:4.08:53,4,0	0/0:21,0:24:27.09:0,27,590	0/0:14,0:14:27.09:0,27,658	0/0:14,0:13:16.30:0,16,258
chr10	5011505	.	ACAGG	A	2422.17	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=10.785;DP=770;FS=9.517;HRun=0;HaplotypeScore=114.9545;InbreedingCoeff=0.9837;MQ=59.65;MQ0=13;MQRankSum=0.027;QD=18.49;ReadPosRankSum=3.675;VQSLOD=2.3902;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:21,31:51:60.20:1004,60,0	0/0:16,0:16:45.08:0,45,741	0/0:27,0:19:17.96:0,18,179	0/0:26,0:18:26.56:0,27,284	0/0:29,0:28:27.05:0,27,560	0/0:23,0:23:42.08:0,42,787	0/0:19,0:19:39.10:0,39,821	0/0:29,0:29:66.12:0,66,929	0/0:21,0:21:39.91:0,40,705	0/0:36,0:35:42.09:0,42,674	0/0:19,0:19:18:0,18,345	0/0:26,0:26:63.08:0,63,1124	0/0:22,0:22:51.14:0,51,1076	0/0:33,0:32:78.12:0,78,1441	0/0:19,0:19:48.10:0,48,900	0/0:30,0:30:81.20:0,81,1625	0/0:37,0:37:96.01:0,96,1660	0/0:26,0:26:65.81:0,66,1086	0/0:27,0:24:35.98:0,36,591	0/0:18,0:18:28.30:0,28,499	0/0:51,0:49:99:0,118,1961	0/0:27,0:26:35.93:0,36,536	0/0:14,0:14:12:0,12,149	0/0:42,0:41:99:0,99,2165	0/0:20,0:20:48.06:0,48,773	1/1:16,17:33:45.04:611,45,0	1/1:5,27:32:39.13:661,39,0	1/1:4,10:14:18.06:305,18,0
chr10	5011839	.	T	TAGAC	6159.55	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-12.469;DP=745;FS=0.000;HRun=0;HaplotypeScore=118.1672;InbreedingCoeff=0.9990;MQ=76.40;MQ0=0;MQRankSum=-1.519;QD=50.91;ReadPosRankSum=2.840;VQSLOD=5.2889;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:60.76:0,61,1513	0/0:18,0:18:48.15:0,48,791	0/0:29,0:29:57.19:0,57,907	0/0:25,0:25:45.15:0,45,747	0/0:27,0:27:72.25:0,72,1213	0/0:23,0:23:54.17:0,54,886	0/0:37,0:37:93.32:0,93,1582	0/0:41,0:41:69.24:0,69,1159	0/0:27,0:27:72.22:0,72,1196	0/0:34,0:34:69.23:0,69,1154	0/0:24,0:24:57.18:0,57,931	0/0:25,0:25:66.23:0,66,1126	0/0:23,0:23:60.15:0,60,961	0/0:29,0:29:72.23:0,72,1202	1/1:6,29:36:81.28:2029,81,0	1/1:9,32:41:90.31:2255,90,0	0/0:25,0:25:66.20:0,66,1080	1/1:7,11:19:30.10:748,30,0	0/0:12,0:12:24.07:0,24,384	0/0:15,0:15:36.10:0,36,562	0/0:18,0:18:45.14:0,45,740	0/0:27,0:27:66.23:0,66,1122	0/0:23,0:23:66.20:0,66,1068	0/0:32,0:32:84.29:0,84,1418	1/1:4,19:25:45.15:1128,45,0	0/0:30,0:30:66.23:0,66,1126	0/0:30,0:30:78.27:0,78,1330	0/0:11,0:11:27.09:0,27,441
chr10	5012858	.	A	AT	686.55	PASS	AB=0.873;AC=12;AF=0.214;AN=56;BaseQRankSum=-0.789;DP=575;FS=2.541;HRun=15;HaplotypeScore=81.7506;InbreedingCoeff=-0.0282;MQ=65.57;MQ0=13;MQRankSum=-1.302;QD=3.09;ReadPosRankSum=-1.109;VQSLOD=0.2619;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:37.34:0,37,288	0/0:4,0:4:8.82:0,9,54	0/1:27,0:13:9.59:10,0,14	0/0:10,0:8:2.88:0,3,18	0/0:17,1:20:5.94:0,6,138	0/1:11,1:12:5.55:6,0,74	0/0:17,1:19:42.16:0,42,245	0/0:22,1:22:33.24:0,33,188	0/1:19,2:20:15.06:15,0,138	0/0:16,0:18:33.39:0,33,191	0/0:26,0:27:44.58:0,45,252	0/0:14,0:16:27.96:0,28,135	0/0:18,0:18:22.25:0,22,155	0/1:19,0:19:5.43:5,0,82	0/0:15,0:17:21.55:0,22,119	0/1:8,1:10:11.50:12,0,44	0/1:18,15:33:16.36:278,0,16	0/0:23,0:26:27.97:0,28,208	0/0:21,0:23:23.89:0,24,241	0/0:26,0:31:25.73:0,26,230	0/0:18,0:19:27.09:0,27,155	0/1:15,2:20:10.99:11,0,151	0/0:15,1:18:26.54:0,27,140	0/0:18,1:23:16.19:0,16,190	0/1:18,2:21:25.34:25,0,148	1/1:9,14:24:8.37:296,8,0	0/1:12,9:18:12.28:110,0,12	0/1:7,3:9:6.02:64,0,6
chr10	5013892	.	AACCCAGC	A	2253.91	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=9.397;DP=538;FS=0.000;HRun=0;HaplotypeScore=121.8354;InbreedingCoeff=0.8101;MQ=70.41;MQ0=3;MQRankSum=-9.779;QD=14.00;ReadPosRankSum=1.913;VQSLOD=2.5482;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:16,9:25:14.85:114,15,0	0/0:7,0:7:12.04:0,12,394	0/0:19,0:14:0:0,0,0	0/0:18,0:15:8.90:0,9,133	0/0:13,0:13:27.09:0,27,917	0/0:17,0:17:23.98:0,24,605	0/0:36,0:36:42.13:0,42,1290	0/0:18,0:18:6.01:0,6,121	0/0:28,0:28:54.17:0,54,1876	0/0:22,0:21:33.11:0,33,1149	0/1:7,0:7:10.95:11,0,151	0/0:14,0:14:20.90:0,21,673	0/0:17,0:17:21.07:0,21,715	0/0:26,0:26:54.16:0,54,1771	1/1:15,15:30:36.03:626,36,0	1/1:8,8:16:5.91:135,6,0	0/0:36,0:36:69.21:0,69,2377	1/1:13,10:23:14.98:339,15,0	0/0:10,0:10:12.04:0,12,361	0/0:10,0:10:9.03:0,9,285	0/0:33,0:33:48.10:0,48,1260	0/0:12,0:12:18.06:0,18,640	0/0:17,0:17:12.04:0,12,373	0/0:24,0:24:40.36:0,40,1214	1/1:11,8:19:17.98:325,18,0	1/1:12,5:17:17.98:355,18,0	1/1:8,8:16:9.50:204,10,0	1/1:3,5:8:15.05:339,15,0
chr10	5019516	.	A	AAAGG	5114.96	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-9.516;DP=593;FS=2.749;HRun=0;HaplotypeScore=93.0996;InbreedingCoeff=0.9816;MQ=68.85;MQ0=0;MQRankSum=-1.230;QD=48.71;ReadPosRankSum=3.823;VQSLOD=5.8222;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,32:39:72.25:1916,72,0	0/0:7,0:7:21.06:0,21,360	0/0:14,0:14:27.86:0,28,471	0/0:18,0:15:33.99:0,34,498	0/0:18,0:18:51.12:0,51,816	0/0:21,0:21:57.15:0,57,929	0/0:32,0:32:96.18:0,96,1348	0/0:33,0:33:87.20:0,87,1224	0/0:23,0:23:60.17:0,60,1026	0/0:22,0:22:60.20:0,60,1086	0/0:16,0:16:45.13:0,45,775	0/0:19,0:19:48.06:0,48,806	0/0:22,0:22:63.11:0,63,970	0/0:20,0:20:54.12:0,54,865	0/0:18,0:18:51.16:0,51,884	0/0:16,0:16:48.14:0,48,832	0/0:21,0:21:25.62:0,26,729	0/0:20,0:20:57.13:0,57,937	0/0:15,0:15:39.10:0,39,600	0/0:25,0:25:69.16:0,69,1156	0/0:28,0:28:69.19:0,69,1152	0/0:14,0:14:42.13:0,42,745	0/0:27,0:27:75.24:0,75,1333	0/0:22,0:22:63.09:0,63,1001	0/0:17,0:17:45.12:0,45,712	1/1:2,26:28:77.94:1607,78,0	1/1:2,30:33:54.02:1431,54,0	1/1:4,1:5:9:160,9,0
chr10	5019926	.	AAAGG	A	1724.14	PASS	AB=1.000;AC=21;AF=0.438;AN=48;BaseQRankSum=7.191;DP=588;FS=4.152;HRun=0;HaplotypeScore=105.6442;InbreedingCoeff=0.7904;MQ=57.53;MQ0=17;MQRankSum=-0.093;QD=6.92;ReadPosRankSum=2.226;VQSLOD=2.2877;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:34:9:79,9,0	./.	./.	./.	0/0:23,0:23:24.07:0,24,459	1/1:10,8:18:12.04:182,12,0	0/1:27,0:26:18.44:155,0,18	./.	1/1:7,7:15:2.89:152,3,0	0/0:23,0:23:33.11:0,33,684	0/0:10,0:10:9.03:0,9,191	0/0:19,0:19:22.83:0,23,511	0/0:15,0:15:24.07:0,24,495	0/0:24,0:23:27.09:0,27,558	1/1:17,13:30:33.11:501,33,0	1/1:18,0:27:9.01:82,9,0	0/0:17,0:17:8.94:0,9,77	0/0:22,0:22:27.05:0,27,470	0/0:24,0:23:14.64:0,15,237	1/1:13,11:24:21.02:262,21,0	0/0:16,0:16:19.62:0,20,402	0/0:18,0:18:30.10:0,30,633	0/0:14,0:13:9.03:0,9,171	0/0:36,0:36:36.10:0,36,847	1/1:6,11:15:12.04:182,12,0	1/1:11,0:20:18.01:164,18,0	1/1:14,0:27:14.49:130,14,0	1/1:8,0:8:2.99:24,3,0
chr10	5024245	.	AC	A	1366.53	PASS	AB=0.891;AC=17;AF=0.304;AN=56;BaseQRankSum=2.422;DP=459;FS=14.569;HRun=11;HaplotypeScore=60.0282;InbreedingCoeff=0.2005;MQ=70.13;MQ0=1;MQRankSum=0.543;QD=5.38;ReadPosRankSum=5.454;VQSLOD=0.2355;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:19:14.54:0,15,87	0/1:10,1:11:20.16:20,0,66	0/0:8,0:7:2.88:0,3,27	0/0:16,0:15:6.60:0,7,126	0/1:9,2:12:9.86:10,0,81	0/0:19,0:18:17.98:0,18,191	0/1:22,2:24:16.75:17,0,410	1/1:16,8:24:20.85:162,21,0	0/0:12,1:13:2.17:0,2,183	0/0:14,0:14:11.82:0,12,97	0/1:6,2:8:13.81:14,0,58	0/1:15,4:19:9.05:9,0,262	0/0:14,1:15:26.94:0,27,242	0/0:13,0:13:20.39:0,20,190	1/1:8,13:21:38.14:351,38,0	0/0:10,0:11:20.92:0,21,169	0/1:26,1:27:9.26:9,0,333	1/1:15,24:41:87.92:700,88,0	0/1:10,1:11:25.38:25,0,97	0/0:9,0:9:6:0,6,57	0/0:26,0:25:30.05:0,30,303	0/1:15,2:17:0.63:1,0,181	0/0:14,0:14:20.05:0,20,274	0/1:22,2:24:25.80:26,0,341	1/1:10,4:15:25.96:196,26,0	0/0:9,0:9:9.01:0,9,83	0/0:9,0:10:8.84:0,9,71	0/0:7,0:7:14.49:0,14,101
chr10	5029575	.	CCTCTCTCTCTCTCT	C	797.28	PASS	AB=0.803;AC=7;AF=0.125;AN=56;BaseQRankSum=4.557;DP=573;FS=9.072;HRun=0;HaplotypeScore=194.0557;InbreedingCoeff=0.2529;MQ=63.46;MQ0=29;MQRankSum=-1.118;QD=8.05;ReadPosRankSum=0.012;VQSLOD=1.6527;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:24,13:38:2.37:75,2,0	0/0:9,0:9:9.03:0,9,475	0/0:22,0:13:6.02:0,6,163	0/0:33,0:17:9.01:0,9,168	0/0:11,0:11:6.49:0,6,300	0/0:9,0:14:6.02:0,6,89	0/0:24,0:34:20.50:0,21,562	0/0:21,0:21:14.26:0,14,247	0/0:13,0:12:12.04:0,12,545	0/0:16,0:14:24.08:0,24,1122	0/0:17,0:16:15.04:0,15,566	0/0:18,0:17:13.29:0,13,584	0/0:20,0:20:7.38:0,7,779	0/0:15,0:15:22.88:0,23,1021	0/0:34,0:34:45.13:0,45,1622	0/0:25,0:25:40.69:0,41,1728	0/1:7,0:6:50.12:84,0,50	0/0:19,0:17:26.62:0,27,809	0/0:21,0:19:27.08:0,27,1233	0/0:13,0:12:17.73:0,18,587	0/0:21,0:20:21.04:0,21,876	0/0:23,0:22:21.06:0,21,951	0/0:17,0:17:24.08:0,24,1106	0/0:38,0:38:70.48:0,70,3469	0/0:18,0:17:14.87:0,15,646	0/1:14,0:22:99:630,0,146	0/1:15,1:18:13.97:106,0,14	1/1:8,0:7:2.99:24,3,0
chr10	5029835	.	A	AC	8194.22	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-12.773;DP=616;FS=1.442;HRun=0;HaplotypeScore=55.5902;InbreedingCoeff=0.9945;MQ=90.56;MQ0=0;MQRankSum=-3.989;QD=43.13;ReadPosRankSum=2.931;VQSLOD=5.3852;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,40:41:99:1773,111,0	0/0:8,0:8:24.08:0,24,335	0/0:30,0:30:90.27:0,90,1201	0/0:21,0:21:57.12:0,57,720	0/0:26,0:26:75.24:0,75,1031	0/0:17,0:17:51.13:0,51,691	0/0:19,0:19:57.19:0,57,797	0/0:32,0:32:96.32:0,96,1341	0/0:28,0:28:84.27:0,84,1158	0/0:19,0:19:54.18:0,54,755	0/0:12,0:12:36.09:0,36,469	0/0:22,0:22:66.20:0,66,890	0/0:23,0:23:69.23:0,69,962	0/0:18,0:18:54.16:0,54,737	1/1:0,32:32:87.30:1391,87,0	1/1:2,22:24:57.19:900,57,0	0/0:27,0:27:81.27:0,81,1133	1/1:1,19:20:57.19:910,57,0	0/0:19,0:19:54.18:0,54,755	0/0:26,0:26:75.25:0,75,1048	0/0:22,0:22:66.22:0,66,923	0/0:21,0:21:63.21:0,63,870	0/0:18,0:18:54.18:0,54,747	0/0:18,0:18:54.18:0,54,755	1/1:0,24:25:72.24:1141,72,0	1/1:0,20:20:60.19:929,60,0	1/1:0,22:22:60.20:959,60,0	1/1:0,6:6:12.04:192,12,0
chr10	5033267	.	GTATT	G	3431.73	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=13.096;DP=810;FS=0.465;HRun=0;HaplotypeScore=139.8242;InbreedingCoeff=0.9878;MQ=73.24;MQ0=0;MQRankSum=-1.370;QD=40.85;ReadPosRankSum=2.799;VQSLOD=3.9047;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:57:99:0,163,4163	0/0:10,0:10:30.10:0,30,774	0/0:14,0:14:39.10:0,39,953	0/0:18,0:18:48.13:0,48,1131	0/0:26,0:26:75.24:0,75,1897	0/0:24,0:24:63.22:0,63,1622	0/0:23,0:23:60.21:0,60,1504	0/0:39,0:39:99:0,99,2482	0/0:35,0:35:87.30:0,87,2277	0/0:35,0:35:96.33:0,96,2343	0/0:24,0:24:69.24:0,69,1768	0/0:24,0:24:72.25:0,72,1852	0/0:42,0:42:99:0,120,3142	0/0:32,0:32:96.33:0,96,2512	0/0:43,0:43:99:0,126,3278	0/0:21,0:21:54.17:0,54,1348	0/0:32,0:32:93.32:0,93,2426	0/0:29,0:29:81.24:0,81,1971	0/0:28,0:28:72.25:0,72,1818	0/0:34,0:34:96.32:0,96,2402	0/0:26,0:26:75.26:0,75,1926	0/0:24,0:24:63.22:0,63,1585	0/0:22,0:22:57.20:0,57,1426	0/0:37,0:37:99:0,99,2553	0/0:27,0:27:75.24:0,75,1863	1/1:3,29:32:11.69:1401,12,0	1/1:5,32:37:81.27:1414,81,0	1/1:2,13:15:36.12:617,36,0
chr10	5035831	.	C	CAGA	6897.85	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=7.560;DP=816;FS=13.992;HRun=0;HaplotypeScore=126.4866;InbreedingCoeff=0.9954;MQ=78.25;MQ0=0;MQRankSum=-1.782;QD=60.51;ReadPosRankSum=4.039;VQSLOD=5.8573;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:59,0:59:99:0,175,2967	0/0:13,0:13:39.11:0,39,636	0/0:26,0:26:69.22:0,69,1116	0/0:19,0:19:48.16:0,48,814	0/0:30,0:30:84.26:0,84,1368	0/0:20,0:20:60.21:0,60,1019	0/0:34,0:34:99:0,99,1686	0/0:27,0:27:75.23:0,75,1202	0/0:25,0:25:75.25:0,75,1246	0/0:32,0:32:93.32:0,93,1579	0/0:10,0:10:30.10:0,30,508	0/0:45,0:45:99:0,132,2199	0/0:35,0:35:99:0,99,1596	0/0:38,0:38:99:0,111,1892	1/1:1,30:31:81.23:1806,81,0	1/1:3,27:30:36.12:1858,36,0	0/0:60,0:60:99:0,181,3056	1/1:2,19:21:57.20:1314,57,0	0/0:26,0:26:75.26:0,75,1277	0/0:21,0:21:60.21:0,60,1023	0/0:37,0:37:99:0,105,1737	0/0:29,0:29:84.29:0,84,1432	0/0:22,0:22:57.19:0,57,972	0/0:36,0:36:99:0,108,1815	1/1:2,28:32:84.29:1920,84,0	0/0:34,0:34:93.31:0,93,1562	0/0:19,0:19:57.20:0,57,971	0/0:5,0:5:15.05:0,15,256
chr10	5037270	.	CACAG	C	2495.93	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=8.733;DP=1038;FS=15.219;HRun=0;HaplotypeScore=198.9860;InbreedingCoeff=0.9817;MQ=49.35;MQ0=47;MQRankSum=0.639;QD=20.29;ReadPosRankSum=3.805;VQSLOD=2.3546;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:56:99:0,129,2862	0/0:11,0:11:27.06:0,27,584	0/0:44,0:6:12.24:0,12,199	0/0:79,0:16:23.12:0,23,506	0/0:18,0:16:32.93:0,33,738	0/0:35,0:34:60.84:0,61,1239	0/0:52,0:52:99:0,109,2572	0/0:45,0:33:93.27:0,93,2153	0/0:36,0:35:57.17:0,57,1468	0/0:28,0:25:75.23:0,75,1739	0/0:15,0:15:33.11:0,33,840	0/0:45,0:45:74.56:0,75,1737	0/0:36,0:35:61.37:0,61,1327	0/0:48,0:47:87.10:0,87,2037	1/1:2,29:30:15.05:285,15,0	1/1:2,34:33:33.02:625,33,0	0/0:38,0:38:99:0,99,2358	1/1:14,17:30:42.69:1063,43,0	0/0:30,0:23:63.21:0,63,1472	0/0:31,0:31:84.27:0,84,2016	0/0:108,0:103:99:0,271,6270	0/0:24,0:24:47.94:0,48,1190	0/0:17,0:17:33.04:0,33,679	0/0:62,0:62:99:0,168,3950	1/1:0,21:23:36.09:682,36,0	0/0:27,0:26:78.25:0,78,1741	0/0:23,0:22:58.17:0,58,1310	0/0:5,0:5:15.05:0,15,404
chr10	5037330	.	CAGATACAG	C	1078.23	PASS	AB=0.938;AC=8;AF=0.143;AN=56;BaseQRankSum=6.445;DP=772;FS=12.429;HRun=0;HaplotypeScore=194.5553;InbreedingCoeff=0.5928;MQ=47.38;MQ0=26;MQRankSum=-3.158;QD=14.00;ReadPosRankSum=-1.102;VQSLOD=1.5491;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:22,4:22:9.91:301,10,0	0/0:10,0:10:30.10:0,30,830	0/0:51,0:7:17.88:0,18,353	0/0:53,0:8:10.90:0,11,288	0/0:24,0:23:34.37:0,34,1057	0/0:25,0:25:47.19:0,47,1648	0/0:37,0:37:84.48:0,84,2822	0/0:41,0:36:99:0,105,3297	0/0:18,0:18:39.06:0,39,956	0/0:28,0:28:75.20:0,75,2539	0/0:11,0:11:27.09:0,27,1022	0/0:30,0:30:72.08:0,72,2073	0/0:26,0:26:73.06:0,73,2317	0/0:31,0:31:60.58:0,61,2131	0/0:13,0:12:4.73:0,5,53	0/0:18,0:10:8.99:0,9,78	0/0:37,0:36:61.15:0,61,2608	0/1:16,0:14:44.27:44,0,82	0/0:19,0:16:47.53:0,48,1293	0/0:17,0:17:23.02:0,23,1582	0/0:94,0:89:99:0,202,7070	0/0:27,0:27:54.18:0,54,1445	0/0:20,0:19:37.85:0,38,1098	0/0:49,0:48:99:0,123,3863	0/0:16,0:13:8.69:0,9,74	0/1:12,1:13:50.29:371,0,50	1/1:11,7:16:37.62:426,38,0	1/1:2,0:2:6.02:80,6,0
chr10	5037347	.	ACACACACT	A	430.96	PASS	AB=0.824;AC=11;AF=0.196;AN=56;BaseQRankSum=7.862;DP=708;FS=29.603;HRun=0;HaplotypeScore=196.0680;InbreedingCoeff=0.5482;MQ=45.84;MQ0=21;MQRankSum=-6.133;QD=3.95;ReadPosRankSum=-1.163;VQSLOD=0.7200;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:14:2.96:19,3,0	0/0:10,0:10:26.93:0,27,603	0/0:37,0:7:20.36:0,20,279	0/0:45,0:7:3.59:0,4,162	0/0:25,0:24:41.50:0,42,975	0/0:28,0:28:29.19:0,29,1133	0/0:34,0:34:78.72:0,79,2411	0/0:38,0:35:81.22:0,81,2287	0/0:18,0:18:25.63:0,26,727	0/0:30,0:30:87.24:0,87,2634	0/0:11,0:11:30.10:0,30,1069	0/0:27,0:27:46.07:0,46,1252	0/0:26,0:26:66.20:0,66,2038	0/0:26,0:26:43.55:0,44,1340	0/1:12,5:15:10.15:25,0,10	0/1:12,9:12:17.66:18,0,18	0/0:31,0:31:63.40:0,63,2306	1/1:10,3:9:9:167,9,0	0/0:17,0:12:24.01:0,24,626	0/0:17,0:17:39.97:0,40,1554	0/0:89,0:85:99:0,172,5735	0/0:27,0:27:31.90:0,32,820	0/0:21,0:21:34.67:0,35,942	0/0:41,0:40:87.15:0,87,2547	1/1:8,5:11:8.36:75,8,0	0/1:12,0:10:32.10:114,0,32	1/1:16,0:14:14.07:166,14,0	0/0:1,0:1:1.25:0,1,3
chr10	5037353	.	ACT	A	413.62	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=9.114;DP=682;FS=46.028;HRun=0;HaplotypeScore=146.5653;InbreedingCoeff=0.8168;MQ=45.03;MQ0=22;MQRankSum=-7.549;QD=3.69;ReadPosRankSum=-3.179;VQSLOD=0.6168;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:7,8:12:2.94:19,3,0	0/0:9,0:9:26.88:0,27,340	0/0:31,0:8:23.87:0,24,231	0/0:47,0:6:6.64:0,7,153	0/0:24,0:24:2.60:0,3,467	0/0:26,0:26:31.89:0,32,592	0/0:32,0:32:77.98:0,78,1291	0/0:36,0:33:96.16:0,96,1372	0/0:17,0:17:19.11:0,19,397	0/0:32,0:32:39.30:0,39,1380	0/0:11,0:11:30.03:0,30,534	0/0:25,0:25:44.59:0,45,643	0/0:26,0:26:68.42:0,68,1063	0/0:25,0:25:40.73:0,41,653	1/1:13,3:14:3.24:16,3,0	1/1:21,0:12:9.07:34,9,0	0/0:32,0:32:59.90:0,60,1162	1/1:12,1:9:11.67:64,12,0	0/0:15,0:9:23.69:0,24,337	0/0:18,0:18:31.20:0,31,728	0/0:83,0:79:99:0,180,2981	0/0:25,0:25:30.99:0,31,419	0/0:16,0:16:33.91:0,34,555	0/0:38,0:37:87.04:0,87,1319	1/1:16,0:14:8.33:76,8,0	1/1:9,4:11:7.07:208,7,0	1/1:8,9:15:21.66:147,22,0	1/1:1,0:1:3:26,3,0
chr10	5037375	.	ACT	A	253.80	PASS	AB=0.975;AC=10;AF=0.179;AN=56;BaseQRankSum=7.066;DP=667;FS=10.627;HRun=0;HaplotypeScore=164.6649;InbreedingCoeff=0.7028;MQ=38.89;MQ0=32;MQRankSum=-6.656;QD=3.25;ReadPosRankSum=-2.307;VQSLOD=1.5903;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:9,0:8:0:0,0,0	0/0:11,0:11:30.52:0,31,500	0/0:38,0:3:8.96:0,9,107	0/0:65,0:13:18.02:0,18,333	0/0:24,0:24:22.47:0,22,343	0/0:24,1:25:25.81:0,26,517	0/0:26,0:26:35.17:0,35,1020	0/0:29,0:26:78.12:0,78,1120	0/0:15,0:15:26.88:0,27,495	0/0:35,0:35:80.46:0,80,1506	0/0:12,0:12:25.01:0,25,413	0/0:25,0:25:44.31:0,44,589	0/0:26,0:26:63.56:0,64,1005	0/0:22,0:22:27.94:0,28,623	0/0:16,1:16:3.76:0,4,24	1/1:14,6:12:14.76:129,15,0	0/0:23,0:23:53.43:0,53,863	1/1:10,1:8:8.46:68,8,0	0/0:17,0:9:26.95:0,27,395	0/0:21,0:21:25.88:0,26,633	0/0:63,0:61:99:0,140,2220	0/0:29,0:29:19:0,19,343	0/0:17,0:17:30.88:0,31,501	0/0:28,0:27:45.95:0,46,684	0/0:21,0:19:0.47:0,0,1	0/1:18,1:16:47.42:47,0,263	1/1:15,1:15:17.57:131,18,0	1/1:3,0:3:3.46:25,3,0
chr10	5037392	.	CAG	C	660.20	PASS	AB=0.825;AC=10;AF=0.185;AN=54;BaseQRankSum=7.487;DP=674;FS=23.846;HRun=0;HaplotypeScore=179.7551;InbreedingCoeff=0.5869;MQ=36.60;MQ0=29;MQRankSum=-6.362;QD=7.50;ReadPosRankSum=0.730;VQSLOD=1.3965;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/0:12,0:12:12.07:0,12,511	0/0:40,0:1:3:0,3,26	0/0:58,0:13:28.64:0,29,404	0/0:23,0:23:19:0,19,331	0/0:23,0:23:23.68:0,24,414	0/0:23,0:23:45.12:0,45,782	0/0:27,0:19:57.01:0,57,993	0/0:23,0:23:41.89:0,42,644	0/0:38,0:38:99:0,107,1742	0/0:15,0:15:16.44:0,16,227	0/0:30,0:30:36.57:0,37,618	0/0:25,0:25:48.02:0,48,820	0/0:26,0:26:36.97:0,37,634	0/0:18,4:21:4.94:0,5,23	1/1:13,4:13:11.14:114,11,0	0/0:20,0:19:35.87:0,36,448	0/1:8,1:7:40.52:90,0,41	0/0:19,0:13:39.06:0,39,636	0/0:32,0:32:31.41:0,31,446	0/0:46,0:44:87.68:0,88,1456	0/0:35,0:35:15.51:0,16,254	0/0:20,0:20:22.01:0,22,359	0/0:23,0:22:24.04:0,24,373	1/1:20,1:19:5.92:39,6,0	0/1:14,7:19:37.55:348,0,38	1/1:11,6:16:28.14:196,28,0	1/1:3,0:3:1.91:22,2,0
chr10	5037402	.	GAC	G	35.33	PASS	AB=0.944;AC=10;AF=0.192;AN=52;BaseQRankSum=3.926;DP=615;FS=0.000;HRun=0;HaplotypeScore=179.3083;InbreedingCoeff=-0.0178;MQ=34.58;MQ0=19;MQRankSum=-2.995;QD=0.26;ReadPosRankSum=1.303;VQSLOD=2.3293;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/1:11,2:13:19.15:19,0,333	./.	0/0:44,0:10:2.94:0,3,18	0/0:24,0:24:4.90:0,5,52	0/0:22,0:22:12.04:0,12,177	0/0:18,1:19:9.03:0,9,140	0/0:24,1:14:21.05:0,21,292	0/1:20,1:21:9.17:9,0,347	0/0:37,2:39:20.63:0,21,1270	0/0:16,0:16:4.90:0,5,53	0/0:25,2:28:39.54:0,40,547	0/1:21,3:24:48.36:48,0,476	0/0:25,1:26:25.01:0,25,416	0/0:22,0:20:4.83:0,5,39	0/1:15,0:12:24.53:32,0,25	0/0:15,0:14:12.04:0,12,172	1/1:9,0:7:0.70:13,1,0	0/0:17,0:14:36.12:0,36,551	0/0:29,0:29:12.47:0,12,166	0/0:36,1:36:3.27:0,3,507	0/0:31,2:33:3.48:0,3,49	0/0:20,0:20:4.42:0,4,52	0/1:19,1:19:24.34:24,0,133	1/1:19,0:18:2.51:7,3,0	0/0:19,0:17:20.70:0,21,123	0/1:16,0:15:2.66:3,0,23	0/0:3,0:3:2.86:0,3,36
chr10	5040295	.	CCA	C	4207.12	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=14.702;DP=781;FS=2.912;HRun=0;HaplotypeScore=112.2371;InbreedingCoeff=0.9997;MQ=75.74;MQ0=1;MQRankSum=-0.936;QD=42.50;ReadPosRankSum=2.414;VQSLOD=5.4658;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:56:99:0,166,3165	0/0:17,0:17:48.16:0,48,927	0/0:26,0:26:60.18:0,60,1054	0/0:26,0:24:37.04:0,37,947	0/0:34,0:34:99:0,102,1936	0/0:28,0:28:84.29:0,84,1609	0/0:32,0:32:96.33:0,96,1832	0/0:28,0:28:75.25:0,75,1404	0/0:27,0:27:78.24:0,78,1460	0/0:22,0:22:59.88:0,60,1189	0/0:22,0:22:66.23:0,66,1265	0/0:32,0:32:96.33:0,96,1819	0/0:20,0:20:57.20:0,57,1079	0/0:32,0:32:93.32:0,93,1778	1/1:2,29:31:84.28:1277,84,0	1/1:0,32:32:93.32:1415,93,0	0/0:32,0:32:96.33:0,96,1852	1/1:0,13:13:39.13:597,39,0	0/0:18,0:18:54.18:0,54,1018	0/0:27,0:27:81.28:0,81,1528	0/0:46,0:46:99:0,138,2639	0/0:25,0:25:75.26:0,75,1431	0/0:21,0:21:60.21:0,60,1148	0/0:33,0:33:99:0,99,1805	1/1:0,23:23:60.20:918,60,0	0/0:37,0:37:99:0,111,2105	0/0:32,0:32:96.28:0,96,1753	0/0:9,0:9:27.09:0,27,521
chr10	5043404	.	A	AGCACAT	3059.67	PASS	AB=0.548;AC=13;AF=0.232;AN=56;BaseQRankSum=0.272;DP=635;FS=0.660;HRun=0;HaplotypeScore=146.7379;InbreedingCoeff=0.8277;MQ=59.32;MQ0=2;MQRankSum=-7.304;QD=17.58;ReadPosRankSum=1.621;VQSLOD=2.7056;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:12,27:43:0.10:0,0,0	0/0:12,0:12:30.03:0,30,527	0/0:17,0:13:1.60:0,2,146	0/0:24,0:15:16.78:0,17,217	0/0:23,0:23:60.18:0,60,1237	0/0:11,0:11:33.04:0,33,611	0/0:18,0:18:44.97:0,45,822	0/0:23,0:23:60.19:0,60,1218	0/0:7,0:7:15.04:0,15,294	0/0:20,0:20:48.16:0,48,995	0/0:9,0:9:24.08:0,24,521	0/0:27,0:27:72.19:0,72,1368	0/0:31,0:31:65.89:0,66,1361	0/0:24,0:24:60.13:0,60,1183	1/1:3,16:19:6.02:155,6,0	0/1:2,16:18:0.10:0,0,0	0/0:31,0:31:69.52:0,70,1257	1/1:2,18:22:18.53:619,19,0	0/0:23,0:23:51.07:0,51,843	0/0:17,0:17:33.11:0,33,708	0/0:61,0:61:99:0,132,2527	0/0:31,0:30:81.23:0,81,1769	0/0:19,0:19:45.14:0,45,896	0/0:32,0:32:93.11:0,93,1710	0/1:2,14:16:0.01:0,0,0	1/1:6,18:26:53.94:1278,54,0	1/1:8,12:21:23.97:655,24,0	1/1:2,7:9:15.05:515,15,0
chr10	5043424	.	C	CGT	836.48	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=7.123;DP=602;FS=0.000;HRun=0;HaplotypeScore=112.3292;InbreedingCoeff=0.8054;MQ=52.65;MQ0=22;MQRankSum=-6.911;QD=9.29;ReadPosRankSum=-0.970;VQSLOD=3.0856;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:26,6:32:2.30:47,2,0	0/0:10,0:10:26.11:0,26,335	0/0:17,0:3:9.01:0,9,107	0/0:31,0:5:4.05:0,4,21	0/0:17,0:17:45.15:0,45,632	0/0:14,0:12:30.10:0,30,423	0/0:24,0:24:51.17:0,51,729	0/0:21,0:19:39.09:0,39,537	0/0:8,0:8:21.05:0,21,283	0/0:17,0:17:45.15:0,45,657	0/0:8,0:8:18.06:0,18,259	0/0:25,0:25:62.39:0,62,817	0/0:27,0:27:62.95:0,63,846	0/0:25,0:25:59.63:0,60,849	0/0:20,0:21:11.57:0,12,107	0/0:16,0:16:5.27:0,5,25	0/0:26,0:26:51.16:0,51,680	0/0:23,0:22:23.66:0,24,379	0/0:15,0:15:41.96:0,42,532	0/0:15,0:13:36.10:0,36,471	0/0:73,0:72:99:0,169,2365	0/0:27,0:25:30.45:0,30,804	0/0:13,0:12:33.11:0,33,458	0/0:39,0:38:99:0,105,1413	0/1:14,0:13:0:0,0,0	1/1:19,0:19:48.10:598,48,0	1/1:19,0:19:15.02:176,15,0	1/1:6,0:6:12.51:160,13,0
chr10	5043426	.	TAC	T	41.84	PASS	AB=0.922;AC=12;AF=0.240;AN=50;BaseQRankSum=3.645;DP=630;FS=4.146;HRun=0;HaplotypeScore=106.7374;InbreedingCoeff=0.0512;MQ=51.88;MQ0=23;MQRankSum=0.571;QD=0.14;ReadPosRankSum=1.300;VQSLOD=2.0124;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:32:0.01:0,0,1	0/0:11,0:12:6:0,6,51	./.	./.	0/0:17,0:17:9.03:0,9,131	0/0:16,0:14:7.34:0,7,108	0/0:24,0:25:12.02:0,12,156	0/0:23,0:20:10.73:0,11,85	0/0:9,0:9:11.83:0,12,144	0/0:15,0:15:3:0,3,29	0/0:10,0:10:9.02:0,9,113	0/1:23,2:25:29.30:29,0,292	0/1:28,0:28:9.90:10,0,180	0/0:25,0:25:21.05:0,21,289	0/0:20,0:23:20.79:0,21,230	0/0:16,0:16:9.02:0,9,110	1/1:23,0:27:2.71:14,3,0	0/0:24,0:24:28.23:0,28,273	0/0:15,0:15:3.01:0,3,44	0/1:15,2:15:49.40:49,0,116	0/1:76,5:80:7.76:8,0,482	0/0:23,0:23:12.01:0,12,134	0/1:16,1:16:17.24:17,0,101	0/1:38,3:41:24.47:24,0,528	0/0:17,0:16:2.99:0,3,25	1/1:16,0:17:2.84:14,3,0	0/1:16,0:19:0.17:0,0,0	./.
chr10	5044057	.	TGAGAGA	T	55.62	PASS	AB=0.970;AC=7;AF=0.206;AN=34;BaseQRankSum=1.001;DP=518;FS=0.000;HRun=0;HaplotypeScore=70.5619;InbreedingCoeff=0.2104;MQ=30.11;MQ0=118;MQRankSum=-1.318;QD=0.47;ReadPosRankSum=0.580;VQSLOD=1.3412;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	0/0:6,0:3:1.55:0,2,4	./.	./.	0/0:9,0:4:2.99:0,3,23	./.	1/1:34,1:25:0.04:2,0,0	0/0:12,0:4:0.47:0,0,1	0/1:31,0:20:42.46:42,0,52	0/1:19,0:12:5.52:6,0,113	0/0:5,0:4:0:0,0,0	0/0:23,5:22:0.47:0,0,1	./.	0/0:22,6:18:0.47:0,0,1	./.	0/0:28,0:24:1.89:0,2,2	./.	0/0:11,0:10:0:0,0,0	./.	0/0:7,1:5:0.47:0,0,1	0/0:40,0:27:0:0,0,0	./.	./.	0/0:40,15:45:2.84:0,3,72	0/1:9,0:8:0:0,0,0	1/1:21,0:18:5.97:84,6,0	0/0:15,0:8:0.47:0,0,1	./.
chr10	5044156	.	T	TGA	514.65	PASS	AB=0.945;AC=8;AF=0.160;AN=50;BaseQRankSum=0.902;DP=572;FS=1.129;HRun=0;HaplotypeScore=74.1303;InbreedingCoeff=0.1842;MQ=39.52;MQ0=151;MQRankSum=-1.658;QD=4.72;ReadPosRankSum=-0.268;VQSLOD=2.1521;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	0/0:6,0:4:3:0,3,25	0/0:34,0:9:12.52:0,13,155	0/0:36,0:3:8.99:0,9,76	0/0:20,0:12:20.44:0,20,166	0/0:15,0:13:14.17:0,14,134	0/0:35,0:22:44.43:0,44,330	0/1:35,0:15:51.76:93,0,52	0/0:24,0:17:11.96:0,12,268	0/0:25,0:16:37.82:0,38,329	./.	0/0:33,0:30:26.99:0,27,257	0/0:20,0:15:26.54:0,27,216	0/0:34,0:27:41.96:0,42,381	0/1:16,4:19:13.55:233,0,14	0/1:17,1:12:1.77:168,0,2	0/1:13,0:13:5.34:5,0,31	0/1:9,0:7:9.17:34,0,9	0/0:12,0:8:17.92:0,18,142	0/0:12,0:7:11.64:0,12,87	0/0:63,0:37:47.56:0,48,417	0/0:21,0:13:17.82:0,18,157	0/0:11,0:7:12.01:0,12,119	0/0:39,0:33:41.68:0,42,381	0/1:7,1:7:1.93:86,0,2	./.	1/1:6,0:6:2.94:18,3,0	0/0:6,0:4:2.98:0,3,22
chr10	5044291	.	CTGTGTG	C	112.25	PASS	AB=1.000;AC=6;AF=0.115;AN=52;BaseQRankSum=1.725;DP=457;FS=2.724;HRun=0;HaplotypeScore=53.8850;InbreedingCoeff=0.3576;MQ=26.15;MQ0=190;MQRankSum=-2.173;QD=2.55;ReadPosRankSum=0.224;VQSLOD=0.7807;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:13:20.10:0,20,510	0/0:7,0:6:9.03:0,9,231	0/0:28,0:1:3.01:0,3,99	0/0:22,0:1:3.01:0,3,99	0/0:15,0:12:18.06:0,18,587	0/0:11,0:5:5.62:0,6,194	0/0:29,0:13:26.70:0,27,754	0/0:19,0:1:3.01:0,3,99	0/0:24,0:12:9.01:0,9,213	0/0:19,0:10:30.10:0,30,824	./.	0/0:25,0:18:15.05:0,15,491	0/0:12,0:3:6.02:0,6,198	0/0:25,0:11:12.03:0,12,397	0/1:7,0:6:0:0,0,0	0/0:11,0:7:3.01:0,3,81	./.	0/0:4,0:1:3.01:0,3,34	1/1:12,4:5:12.01:196,12,0	1/1:5,7:11:1.25:3,1,0	0/0:43,0:24:45.15:0,45,1157	0/0:11,0:10:15.05:0,15,488	0/0:9,0:6:3.01:0,3,99	0/0:48,0:27:17.23:0,17,550	0/1:8,0:7:0.11:0,0,0	0/0:8,0:3:6.02:0,6,182	0/0:3,0:2:3.90:0,4,101	0/0:8,0:2:3.01:0,3,61
chr10	5044449	.	C	CTG	386.76	PASS	AB=0.910;AC=15;AF=0.326;AN=46;BaseQRankSum=-1.356;DP=515;FS=0.000;HRun=0;HaplotypeScore=46.5517;InbreedingCoeff=0.3750;MQ=29.80;MQ0=208;MQRankSum=-0.385;QD=2.95;ReadPosRankSum=-1.581;VQSLOD=1.0426;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:4:2.98:21,3,0	0/0:6,0:5:2.88:0,3,15	./.	./.	0/0:17,0:8:6:0,6,53	0/0:12,0:3:0:0,0,0	0/0:22,0:8:8.52:0,9,65	./.	0/1:20,0:15:1.83:2,0,99	0/0:22,0:4:5.99:0,6,50	./.	0/0:23,0:15:10.50:0,10,152	0/0:15,0:10:2.97:0,3,133	0/0:17,0:5:11.96:0,12,93	1/1:12,0:10:11.63:79,12,0	0/1:16,0:10:26.06:76,0,26	0/1:12,6:15:45.49:45,0,125	0/0:7,0:5:8.90:0,9,63	0/0:21,0:7:14.84:0,15,111	0/0:13,0:8:11.58:0,12,83	0/0:50,0:18:8.72:0,9,59	0/0:20,0:9:11.93:0,12,88	./.	0/0:39,0:23:7.77:0,8,127	1/1:9,0:5:8.99:75,9,0	1/1:11,10:12:0.03:151,0,0	1/1:5,5:8:2.89:42,3,0	1/1:8,5:8:3.01:35,3,0
chr10	5046251	.	C	CAGAG	346.52	PASS	AB=0.843;AC=4;AF=0.074;AN=54;BaseQRankSum=0.028;DP=427;FS=11.769;HRun=0;HaplotypeScore=68.1538;InbreedingCoeff=-0.0877;MQ=61.99;MQ0=49;MQRankSum=-2.288;QD=6.08;ReadPosRankSum=-0.971;VQSLOD=0.0093;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:17,4:13:64.83:149,0,65	0/0:4,0:4:12.04:0,12,214	0/1:19,0:7:4.54:5,0,217	0/0:24,0:12:25.02:0,25,276	0/0:8,0:7:18.06:0,18,336	0/0:8,0:7:12.04:0,12,217	0/0:17,0:17:48.14:0,48,825	0/0:18,0:10:21.05:0,21,317	0/0:10,0:10:24.08:0,24,447	0/0:6,0:4:12.04:0,12,210	0/0:5,0:5:9.03:0,9,161	0/0:16,0:15:30.10:0,30,559	0/0:12,0:12:33.11:0,33,584	0/0:19,0:19:36.06:0,36,580	0/0:7,0:7:15.05:0,15,257	0/0:11,0:11:21.07:0,21,368	0/0:28,0:28:69.21:0,69,1218	0/0:22,0:22:51.17:0,51,938	0/0:19,0:8:21.04:0,21,358	0/0:10,0:9:18.06:0,18,336	0/0:67,0:48:99:0,114,2030	0/0:10,0:9:18.06:0,18,316	0/0:4,0:4:6.02:0,6,112	0/0:36,0:34:78.22:0,78,1328	0/0:6,0:6:18.06:0,18,324	0/1:7,1:4:70.86:71,0,99	0/1:4,5:9:96.95:224,0,97	./.
chr10	5046668	.	GA	G	1323.90	PASS	AB=0.946;AC=12;AF=0.214;AN=56;BaseQRankSum=3.773;DP=594;FS=2.112;HRun=12;HaplotypeScore=73.6493;InbreedingCoeff=0.5832;MQ=66.28;MQ0=9;MQRankSum=0.300;QD=7.08;ReadPosRankSum=2.675;VQSLOD=2.5172;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:38:59.95:0,60,323	0/0:13,0:15:41.51:0,42,389	0/1:29,0:16:45.11:45,0,50	0/1:25,0:17:3.08:3,0,87	0/0:28,0:28:72.13:0,72,719	0/0:18,0:19:47.90:0,48,456	0/0:14,0:17:38.39:0,38,318	0/0:25,0:25:47.02:0,47,432	0/0:12,0:12:24.05:0,24,243	0/0:22,0:22:53.91:0,54,523	0/0:13,0:12:30.05:0,30,295	0/0:19,2:21:10.61:0,11,460	0/0:17,0:17:48.09:0,48,485	0/0:17,1:18:24.86:0,25,432	1/1:5,22:28:40.31:485,40,0	1/1:4,12:16:8.41:248,8,0	0/0:20,1:21:24.94:0,25,433	1/1:6,24:31:49.84:377,50,0	0/0:21,0:20:40.44:0,40,403	0/0:17,0:20:38.91:0,39,377	0/1:14,2:16:9.95:10,0,221	0/1:15,2:17:16.21:16,0,214	0/0:14,0:16:35.74:0,36,333	0/0:22,1:23:35.77:0,36,553	1/1:5,19:24:40.88:308,41,0	0/0:12,0:29:37.40:0,37,193	0/0:4,0:10:14.20:0,14,72	0/0:8,0:13:17.49:0,17,112
chr10	5048003	.	TAC	T	1912.09	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=14.509;DP=873;FS=28.858;HRun=0;HaplotypeScore=109.0369;InbreedingCoeff=0.8049;MQ=73.32;MQ0=0;MQRankSum=-2.013;QD=17.70;ReadPosRankSum=1.806;VQSLOD=1.6251;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:42,0:42:86.79:731,87,0	0/0:16,1:17:3.97:0,4,614	0/0:21,1:23:39.07:0,39,796	0/0:26,0:26:60.16:0,60,892	0/0:24,0:24:69.24:0,69,1150	0/0:21,0:21:63.22:0,63,1044	0/0:41,0:41:96.31:0,96,1580	0/0:30,0:30:75.24:0,75,1229	0/0:24,0:24:54.18:0,54,901	0/0:44,0:44:99:0,114,1905	0/0:15,0:15:39.12:0,39,624	0/0:44,0:44:99:0,108,1781	0/0:29,0:29:75.26:0,75,1254	0/0:35,0:35:99:0,99,1652	0/0:43,1:44:73.18:0,73,1769	0/0:33,0:33:90.31:0,90,1506	0/0:36,0:36:93.32:0,93,1556	0/0:26,1:27:40.07:0,40,1211	0/0:35,0:35:77.89:0,78,1282	0/0:31,0:31:81.26:0,81,1322	0/0:64,1:65:99:0,130,2719	0/0:24,0:24:66.23:0,66,1101	0/0:25,0:24:66.23:0,66,1099	0/0:36,0:36:81.28:0,81,1343	0/0:36,0:35:99:0,99,1629	0/1:27,0:27:13.42:398,0,13	1/1:24,0:24:57:512,57,0	1/1:15,0:15:45.03:420,45,0
chr10	5048015	.	CAT	C	3938.12	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=13.057;DP=855;FS=26.306;HRun=0;HaplotypeScore=100.1908;InbreedingCoeff=0.9892;MQ=74.64;MQ0=0;MQRankSum=-1.407;QD=34.85;ReadPosRankSum=2.280;VQSLOD=2.8823;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,41:42:87.28:1387,87,0	0/0:15,0:15:31.75:0,32,802	0/0:24,0:24:67.15:0,67,1171	0/0:26,0:26:74.41:0,74,1113	0/0:27,0:27:78.02:0,78,1455	0/0:23,0:23:69.17:0,69,1252	0/0:35,0:35:99:0,105,1984	0/0:29,0:29:87.22:0,87,1568	0/0:22,0:22:66.17:0,66,1194	0/0:42,0:42:99:0,126,2331	0/0:19,0:19:48.10:0,48,797	0/0:40,0:40:99:0,117,2240	0/0:28,0:28:84.24:0,84,1594	0/0:35,0:35:99:0,105,2056	0/0:40,0:40:99:0,107,2249	0/0:32,0:32:96.30:0,96,1874	0/0:34,0:34:99:0,102,1947	0/0:29,0:29:69.84:0,70,1513	0/0:34,0:34:98.84:0,99,1739	0/0:29,0:29:87.25:0,87,1631	0/0:64,0:64:99:0,175,3432	0/0:23,0:23:69.21:0,69,1326	0/0:24,0:24:72.22:0,72,1362	0/0:32,0:32:87.26:0,87,1675	0/0:36,0:36:99:0,105,1964	1/1:2,24:26:11.05:918,11,0	1/1:0,28:28:56.92:908,57,0	1/1:0,17:17:45.15:725,45,0
chr10	5049861	.	ACGC	A	3892.15	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=13.587;DP=741;FS=5.684;HRun=0;HaplotypeScore=109.1655;InbreedingCoeff=1.0000;MQ=83.41;MQ0=0;MQRankSum=-5.304;QD=49.27;ReadPosRankSum=2.976;VQSLOD=5.9774;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,132,3145	0/0:15,0:15:45.15:0,45,1086	0/0:27,0:27:75.20:0,75,1755	0/0:23,0:23:61:0,61,1402	0/0:24,0:24:69.24:0,69,1691	0/0:31,0:31:93.28:0,93,2203	0/0:35,0:35:99:0,105,2515	0/0:34,0:34:92.52:0,93,2231	0/0:20,0:20:60.21:0,60,1443	0/0:26,0:26:75.24:0,75,1726	0/0:28,0:28:84.26:0,84,1957	0/0:28,0:28:84.29:0,84,1983	0/0:23,0:23:66.21:0,66,1542	0/0:26,0:26:78.27:0,78,1888	1/1:0,20:20:51.09:882,51,0	1/1:0,14:14:42.14:782,42,0	0/0:30,0:30:90.24:0,90,2084	1/1:0,16:16:42.14:752,42,0	0/0:27,0:27:81.20:0,81,1749	0/0:26,0:26:78.23:0,78,1817	0/0:51,0:51:99:0,154,3627	0/0:20,0:20:60.21:0,60,1421	0/0:18,0:18:54.19:0,54,1289	0/0:38,0:38:99:0,114,2711	1/1:0,29:29:81.28:1476,81,0	0/0:22,0:22:66.23:0,66,1624	0/0:32,0:32:96.31:0,96,2246	0/0:14,0:14:42.14:0,42,1034
chr10	5052414	.	TCTGA	T	3465.77	PASS	AB=0.922;AC=13;AF=0.232;AN=56;BaseQRankSum=12.678;DP=851;FS=3.811;HRun=0;HaplotypeScore=176.2971;InbreedingCoeff=0.6657;MQ=83.57;MQ0=4;MQRankSum=-1.928;QD=17.50;ReadPosRankSum=-1.374;VQSLOD=3.0845;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,15:18:32.98:490,33,0	0/0:9,0:9:21.07:0,21,554	0/1:44,0:40:99:329,0,748	0/1:53,0:47:99:535,0,855	0/0:15,0:14:30.10:0,30,751	0/0:25,0:25:51.18:0,51,1335	0/0:39,0:39:99:0,108,2800	0/0:45,0:44:99:0,122,2751	0/0:38,0:38:97.56:0,98,2465	0/0:39,0:39:99:0,102,2505	0/0:21,0:20:48.16:0,48,1265	0/0:51,0:51:99:0,123,3093	0/0:30,0:30:81.25:0,81,2027	0/0:48,0:48:99:0,138,3553	1/1:5,12:16:33.11:603,33,0	1/1:9,7:14:30.07:473,30,0	1/1:1,23:24:45.07:789,45,0	0/1:9,4:9:47.98:164,0,48	0/0:26,0:22:63.21:0,63,1443	0/0:27,0:27:72.16:0,72,1674	0/0:81,0:80:99:0,226,5828	0/0:38,0:38:99:0,100,2501	0/0:17,0:17:48.11:0,48,1138	0/0:45,0:45:99:0,132,3310	1/1:13,0:13:6.02:82,6,0	0/0:27,0:26:57.17:0,57,1257	0/0:27,0:27:52.38:0,52,1215	0/0:5,0:5:9.03:0,9,220
chr10	5052418	.	A	ACAGAGTGGG	2706.96	PASS	AB=0.956;AC=12;AF=0.214;AN=56;BaseQRankSum=10.364;DP=838;FS=10.683;HRun=0;HaplotypeScore=259.0066;InbreedingCoeff=0.5394;MQ=85.16;MQ0=9;MQRankSum=-4.071;QD=13.27;ReadPosRankSum=-2.272;VQSLOD=0.7479;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:15:32.90:363,33,0	0/0:8,0:8:21.07:0,21,663	0/1:47,0:42:99:113,0,1350	0/1:55,0:50:99:103,0,1315	0/0:15,0:14:30.10:0,30,941	0/0:22,0:22:51.18:0,51,1569	0/0:38,0:38:99:0,108,3328	0/0:45,0:44:99:0,128,3366	0/0:40,0:40:99:0,102,2951	0/0:35,0:35:99:0,105,3116	0/0:19,0:18:48.16:0,48,1508	0/0:46,0:46:99:0,126,3681	0/0:28,0:28:81.25:0,81,2397	0/0:48,0:48:99:0,138,4220	1/1:18,1:16:38.76:1116,39,0	1/1:16,0:12:30:339,30,0	0/1:23,0:23:32.21:32,0,558	0/1:9,2:7:99:517,0,114	0/0:27,0:22:63.21:0,63,1896	0/0:27,0:27:72.19:0,72,2076	0/0:81,0:80:99:0,229,6971	0/0:40,0:40:99:0,108,3100	0/0:17,0:17:51.10:0,51,1337	0/0:46,0:46:99:0,138,4005	1/1:5,8:14:6.02:296,6,0	0/0:24,0:22:57.17:0,57,1428	0/0:24,0:24:57.18:0,57,1492	0/0:4,0:4:9.03:0,9,250
chr10	5052420	.	TGACA	T	2123.79	PASS	AB=0.941;AC=12;AF=0.214;AN=56;BaseQRankSum=13.353;DP=849;FS=3.146;HRun=0;HaplotypeScore=175.4509;InbreedingCoeff=0.5474;MQ=84.18;MQ0=11;MQRankSum=-0.379;QD=9.92;ReadPosRankSum=-2.702;VQSLOD=2.9435;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:15:27.03:291,27,0	0/0:9,0:9:27.07:0,27,624	0/1:40,5:41:99:346,0,917	0/1:53,4:52:99:414,0,971	0/0:13,0:12:30.10:0,30,793	0/0:21,0:21:51.18:0,51,1350	0/0:41,0:41:99:0,123,3009	0/0:46,0:44:99:0,113,2914	0/0:42,0:42:99:0,110,2652	0/0:35,0:35:99:0,105,2659	0/0:20,0:18:48.16:0,48,1302	0/0:48,0:48:99:0,120,3174	0/0:28,0:28:78.25:0,78,2073	0/0:48,0:48:99:0,135,3643	1/1:21,0:16:19.60:392,20,0	1/1:18,0:12:8.06:251,8,0	1/1:23,0:23:42.11:463,42,0	0/1:12,0:7:99:103,0,108	0/0:25,0:22:62.80:0,63,1578	0/0:26,0:26:69.17:0,69,1709	0/0:80,0:79:99:0,232,6092	0/0:39,0:39:99:0,102,2644	0/0:21,0:20:51.15:0,51,1236	0/0:44,0:44:99:0,129,3461	0/1:18,0:12:26.05:35,0,26	0/0:21,0:19:51.15:0,51,1129	0/0:24,0:24:54.06:0,54,1190	0/0:4,0:4:9.03:0,9,227
chr10	5052429	.	GGTCT	G	1816.93	PASS	AB=0.975;AC=14;AF=0.250;AN=56;BaseQRankSum=12.318;DP=867;FS=22.068;HRun=0;HaplotypeScore=177.7539;InbreedingCoeff=0.3805;MQ=85.15;MQ0=20;MQRankSum=-0.034;QD=7.04;ReadPosRankSum=-1.240;VQSLOD=0.9653;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:13:3.01:35,3,0	0/0:11,0:11:33.10:0,33,819	0/1:51,3:46:99:238,0,938	0/1:58,7:58:99:433,0,1165	0/0:12,0:12:30.10:0,30,758	0/0:23,0:23:54.19:0,54,1479	0/0:41,0:41:99:0,117,2932	0/0:40,0:33:93.30:0,93,2386	0/0:42,0:42:99:0,119,3041	0/0:36,0:35:96.33:0,96,2485	0/0:19,0:17:48.15:0,48,1235	0/0:45,0:45:99:0,129,3322	0/0:27,0:27:78.25:0,78,2113	0/0:49,0:49:99:0,141,3353	0/1:24,0:17:99:183,0,255	0/1:20,0:11:71.53:99,0,72	0/0:19,0:19:41.99:0,42,904	0/1:15,0:8:11.75:107,0,12	0/0:32,0:27:81.21:0,81,1949	0/0:23,0:23:69.24:0,69,1910	0/0:81,0:80:99:0,230,6000	0/0:39,0:39:99:0,102,2634	0/0:23,0:21:63.22:0,63,1706	0/0:47,0:47:99:0,141,3755	0/1:28,0:15:50.04:50,0,599	1/1:16,0:13:38.11:390,38,0	1/1:18,0:18:30.08:353,30,0	1/1:4,0:4:9.03:101,9,0
chr10	5052431	.	TCTGA	T	2834.14	PASS	AB=0.918;AC=14;AF=0.250;AN=56;BaseQRankSum=12.679;DP=861;FS=22.075;HRun=0;HaplotypeScore=172.0213;InbreedingCoeff=0.3806;MQ=83.62;MQ0=23;MQRankSum=-0.655;QD=11.16;ReadPosRankSum=-2.636;VQSLOD=1.0972;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,1:12:3.01:53,3,0	0/0:12,0:12:33.03:0,33,808	0/1:49,0:41:99:381,0,583	0/1:64,0:57:99:558,0,771	0/0:12,0:12:30.07:0,30,675	0/0:21,0:21:54.19:0,54,1383	0/0:41,0:41:99:0,111,2716	0/0:38,0:31:90.29:0,90,2049	0/0:44,0:44:99:0,119,2901	0/0:34,0:32:96.29:0,96,2220	0/0:18,0:15:45.14:0,45,1110	0/0:44,0:44:99:0,117,2977	0/0:26,0:26:75.26:0,75,1954	0/0:50,0:50:99:0,120,3050	0/1:26,1:19:99:207,0,218	0/1:15,5:11:63.98:168,0,64	0/0:19,0:19:30.10:0,30,787	0/1:11,5:8:11.74:148,0,12	0/0:35,0:30:81.24:0,81,1830	0/0:23,0:23:69.24:0,69,1736	0/0:79,1:79:99:0,220,5434	0/0:36,0:36:99:0,99,2404	0/0:25,0:22:63.22:0,63,1564	0/0:49,0:49:99:0,138,3634	0/1:29,0:16:47.03:47,0,534	1/1:3,13:13:39.13:688,39,0	1/1:1,15:16:36:593,36,0	1/1:0,4:4:9.03:163,9,0
chr10	5052493	.	TGACA	T	212.22	PASS	AB=0.898;AC=6;AF=0.107;AN=56;BaseQRankSum=4.803;DP=691;FS=20.779;HRun=0;HaplotypeScore=103.1513;InbreedingCoeff=0.3040;MQ=50.57;MQ0=110;MQRankSum=-5.587;QD=2.79;ReadPosRankSum=-0.143;VQSLOD=0.5034;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:11:1.58:3,2,0	0/0:10,0:10:30.10:0,30,749	0/0:18,0:5:14.53:0,15,214	0/0:18,0:7:17.25:0,17,150	0/0:12,1:12:27.09:0,27,471	0/0:15,0:13:33.11:0,33,808	0/0:29,0:25:60.19:0,60,1488	0/0:44,0:36:96.30:0,96,2083	0/0:42,0:40:99:0,108,2707	0/0:31,0:26:75.26:0,75,1791	0/0:7,0:6:15.05:0,15,374	0/0:40,0:38:81.28:0,81,2055	0/0:17,0:15:39.13:0,39,967	0/0:38,0:37:78.25:0,78,1944	0/1:32,11:23:99:285,0,445	0/0:38,8:30:27.05:0,27,801	1/1:3,0:3:1.25:3,1,0	0/0:27,3:22:51.59:0,52,872	0/0:22,0:20:57.15:0,57,1204	0/0:21,0:21:60.19:0,60,1425	0/0:67,0:58:99:0,163,3908	0/0:18,0:18:36.02:0,36,888	0/0:18,0:18:45.15:0,45,1081	0/0:45,0:45:99:0,108,2750	0/0:8,1:6:9.03:0,9,163	0/0:15,0:4:12.01:0,12,163	0/1:10,0:7:10.04:10,0,179	0/0:2,0:2:3.01:0,3,48
chr10	5053004	.	T	TCTGA	32.36	PASS	AB=0.923;AC=4;AF=0.080;AN=50;BaseQRankSum=2.666;DP=838;FS=13.722;HRun=0;HaplotypeScore=90.3021;InbreedingCoeff=0.2242;MQ=31.09;MQ0=303;MQRankSum=-2.708;QD=0.31;ReadPosRankSum=0.111;VQSLOD=0.8614;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:5:3.01:0,3,47	0/0:16,0:13:27.09:0,27,495	./.	./.	0/0:20,0:11:12.04:0,12,201	0/0:27,0:21:26.71:0,27,417	0/0:29,0:21:42.10:0,42,720	0/0:42,0:4:12.04:0,12,213	0/0:48,0:39:75.24:0,75,1309	0/0:42,0:26:66.22:0,66,1170	0/0:14,0:8:15.05:0,15,269	0/0:42,0:32:60.21:0,60,1088	0/0:43,0:36:66.11:0,66,1085	0/0:36,0:26:57.18:0,57,1010	0/1:55,6:22:41.89:42,0,518	0/0:49,0:17:36.12:0,36,561	0/0:18,0:16:12.01:0,12,160	1/1:13,1:8:3.01:58,3,0	0/0:33,0:7:18.06:0,18,331	0/0:18,0:10:18.05:0,18,303	0/0:58,0:44:86.27:0,86,1391	0/0:33,0:21:48.04:0,48,764	0/0:14,0:9:18.06:0,18,331	0/0:43,0:38:84.22:0,84,1495	0/1:27,2:13:33.50:34,0,255	0/0:46,0:4:6.02:0,6,110	0/0:21,0:8:11.16:0,11,208	./.
chr10	5053030	.	T	TCTGA	2762.09	PASS	AB=0.693;AC=4;AF=0.077;AN=52;BaseQRankSum=-4.740;DP=946;FS=40.945;HRun=0;HaplotypeScore=101.6606;InbreedingCoeff=-0.0959;MQ=30.47;MQ0=307;MQRankSum=-1.222;QD=12.55;ReadPosRankSum=1.157;VQSLOD=1.3504;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:7:9.02:0,9,135	0/0:14,0:10:20.94:0,21,346	./.	./.	0/0:31,0:17:24.22:0,24,383	0/0:22,0:17:18.06:0,18,307	0/0:34,0:23:23.80:0,24,411	0/0:55,0:9:27.08:0,27,457	0/0:52,0:43:36.56:0,37,1409	0/0:31,0:13:35.90:0,36,590	0/0:20,0:9:12.04:0,12,221	0/0:37,0:27:42.02:0,42,669	0/0:40,0:33:63.54:0,64,1046	0/0:39,0:31:69.24:0,69,1243	0/1:47,28:37:99:635,0,694	0/1:42,33:40:99:1199,0,342	0/0:28,0:26:45.15:0,45,827	0/1:11,10:13:82.81:451,0,83	0/0:25,0:8:24.06:0,24,395	0/0:24,0:14:34.32:0,34,539	0/0:57,0:40:80.44:0,80,1439	0/0:27,0:13:21.85:0,22,310	0/0:15,0:7:15.02:0,15,241	0/0:42,0:38:75.22:0,75,1293	0/1:25,22:26:99:585,0,267	0/0:58,0:9:15.03:0,15,245	0/0:28,0:13:11.36:0,11,220	0/0:12,0:4:5.84:0,6,102
chr10	5053069	.	TCTGACAGAATGGG	T	267.02	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=7.576;DP=1005;FS=13.718;HRun=0;HaplotypeScore=258.2007;InbreedingCoeff=0.4905;MQ=45.65;MQ0=157;MQRankSum=-3.489;QD=2.32;ReadPosRankSum=-0.605;VQSLOD=0.9853;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:13:6.97:41,7,0	0/0:13,0:9:26.43:0,26,187	0/1:13,0:13:37.55:38,0,100	0/1:21,0:17:1.52:2,0,142	0/0:34,0:26:49.45:0,49,334	0/0:23,0:21:39.83:0,40,286	0/0:37,0:34:87.84:0,88,692	0/0:38,0:20:38.78:0,39,314	0/0:44,0:38:92.22:0,92,745	0/0:43,0:35:85.17:0,85,736	0/0:23,0:18:32.15:0,32,232	0/0:36,0:32:74.43:0,74,577	0/0:37,0:32:82.17:0,82,687	0/0:34,0:29:62.57:0,63,567	0/0:77,0:55:99:0,110,704	0/0:85,0:56:37.25:0,37,604	0/0:38,0:38:86.52:0,87,833	0/0:27,0:23:50.67:0,51,382	0/0:29,0:10:26.95:0,27,223	0/0:29,0:24:60.23:0,60,410	0/0:65,0:55:99:0,136,1248	0/0:29,0:21:47.82:0,48,332	0/0:20,0:16:38.59:0,39,282	0/0:43,0:42:95.89:0,96,936	0/0:49,0:37:51.48:0,51,537	1/1:23,19:23:10.19:274,10,0	0/0:37,0:24:11.09:0,11,78	0/1:12,0:6:17.01:38,0,17
chr10	5053547	.	TAC	T	2906.87	PASS	AB=0.548;AC=7;AF=0.125;AN=56;BaseQRankSum=11.047;DP=639;FS=0.000;HRun=0;HaplotypeScore=95.2631;InbreedingCoeff=0.8253;MQ=82.62;MQ0=0;MQRankSum=-2.847;QD=37.75;ReadPosRankSum=2.295;VQSLOD=5.7797;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,32:32:93.32:1424,93,0	0/0:5,0:5:15.05:0,15,290	0/0:24,0:24:66.23:0,66,1248	0/0:24,0:25:57.97:0,58,1281	0/0:16,0:16:45.15:0,45,868	0/0:24,0:24:69.24:0,69,1319	0/0:32,0:32:84.29:0,84,1611	0/0:23,0:23:20.29:0,20,1163	0/0:26,0:26:78.25:0,78,1472	0/0:19,0:19:57.20:0,57,1095	0/0:18,0:18:54.19:0,54,1042	0/0:32,0:32:93.32:0,93,1780	0/0:18,0:18:51.17:0,51,974	0/0:26,0:26:78.27:0,78,1496	0/0:33,0:33:96.33:0,96,1834	0/0:27,0:27:78.27:0,78,1498	0/0:45,0:45:99:0,132,2549	0/0:24,0:24:72.25:0,72,1384	0/0:18,0:18:54.16:0,54,1008	0/0:21,0:21:63.22:0,63,1216	0/0:36,0:36:92.98:0,93,1794	0/0:16,0:16:42.14:0,42,809	0/0:12,0:12:36.12:0,36,694	0/0:31,0:31:87.30:0,87,1680	0/0:11,0:11:30.10:0,30,579	0/1:4,19:23:99:804,0,162	1/1:0,17:17:39.13:597,39,0	1/1:0,5:5:15.05:230,15,0
chr10	5053608	.	G	GGTGT	1806.06	PASS	AB=1.000;AC=38;AF=0.731;AN=52;BaseQRankSum=-3.124;DP=567;FS=13.145;HRun=0;HaplotypeScore=141.3747;InbreedingCoeff=0.4157;MQ=61.31;MQ0=15;MQRankSum=0.262;QD=4.85;ReadPosRankSum=-0.732;VQSLOD=1.8102;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:28:9.86:0,10,95	1/1:9,0:9:2.88:65,3,0	./.	./.	0/1:11,0:11:12.95:85,0,13	1/1:27,0:26:11.97:130,12,0	1/1:18,0:18:5.97:47,6,0	1/1:24,0:22:1.82:5,2,0	1/1:20,5:27:3.01:70,3,0	1/1:12,0:11:15:222,15,0	1/1:13,0:12:3.01:62,3,0	1/1:23,0:23:8.83:62,9,0	1/1:17,0:17:14.71:150,15,0	1/1:12,0:17:0.88:2,1,0	0/0:24,0:24:0.37:0,0,1	0/0:20,0:20:12.02:0,12,138	0/0:26,0:38:1.35:0,1,100	1/1:21,0:21:9.47:137,9,0	1/1:18,0:15:0.89:2,1,0	1/1:19,0:19:12.01:185,12,0	1/1:33,1:33:18.03:294,18,0	1/1:17,0:18:0.78:9,1,0	1/1:13,4:19:6.02:138,6,0	1/1:16,4:22:9.03:208,9,0	1/1:15,0:13:3.01:66,3,0	0/0:23,0:23:1.23:0,1,8	0/0:20,0:20:3.43:0,3,55	0/1:7,0:6:0:0,0,0
chr10	5053658	.	TGA	T	474.62	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=4.036;DP=429;FS=0.000;HRun=0;HaplotypeScore=77.6031;InbreedingCoeff=0.7929;MQ=57.82;MQ0=13;MQRankSum=-0.824;QD=9.13;ReadPosRankSum=-1.121;VQSLOD=2.9107;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:22:12.51:250,13,0	0/0:10,0:10:17.46:0,17,157	0/0:24,0:12:16.28:0,16,226	0/0:27,0:17:41.24:0,41,469	0/0:10,0:10:27.02:0,27,333	0/0:16,0:16:29.96:0,30,289	0/0:23,0:23:50.45:0,50,470	0/0:14,0:14:39.02:0,39,361	0/0:11,0:11:23.63:0,24,199	0/0:12,0:12:33.03:0,33,382	0/0:9,0:9:4.22:0,4,117	0/0:16,0:16:29.31:0,29,231	0/0:16,0:16:38.84:0,39,382	0/0:10,0:10:11.58:0,12,122	0/0:14,0:13:14.99:0,15,128	0/0:11,0:11:26.73:0,27,268	0/0:35,0:35:59.21:0,59,398	0/0:11,0:10:17.96:0,18,177	0/0:5,0:5:14.96:0,15,132	0/0:12,0:12:30.01:0,30,367	0/0:31,0:30:60.14:0,60,519	0/0:14,0:14:26.27:0,26,288	0/0:12,0:12:22.08:0,22,192	0/0:20,0:20:24:0,24,229	0/0:14,0:12:19.55:0,20,160	0/1:12,0:11:0.06:198,0,0	1/1:1,13:14:9:111,9,0	1/1:4,0:3:5.97:48,6,0
chr10	5054519	.	CTGTGTGTGTGTGTG	C	6674.92	PASS	AB=0.758;AC=14;AF=0.250;AN=56;BaseQRankSum=11.775;DP=722;FS=24.950;HRun=0;HaplotypeScore=264.3541;InbreedingCoeff=0.7794;MQ=72.79;MQ0=11;MQRankSum=-10.659;QD=33.88;ReadPosRankSum=3.979;VQSLOD=2.8202;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:26:15.05:423,15,0	0/0:10,0:12:27.08:0,27,1097	0/0:40,0:29:8.24:0,8,194	0/0:46,0:29:18.06:0,18,431	0/0:16,0:19:27.09:0,27,1399	0/0:18,0:20:27.09:0,27,1448	0/0:27,0:33:43.01:0,43,1950	0/0:23,0:23:21.06:0,21,459	0/0:21,0:23:48.16:0,48,2364	0/0:24,0:24:37.01:0,37,1914	0/0:12,0:12:33.11:0,33,1338	0/0:27,0:27:39.13:0,39,1952	0/0:14,0:15:28.34:0,28,1558	0/0:24,0:24:44.85:0,45,2159	1/1:21,23:47:56.81:2047,57,0	1/1:16,15:31:33.11:1271,33,0	0/0:14,0:32:57.17:0,57,1740	0/1:10,2:12:88.67:112,0,89	0/0:22,0:23:26.56:0,27,1114	0/0:17,0:18:42.14:0,42,1942	0/0:60,0:59:81.26:0,81,3870	0/0:15,0:19:30.10:0,30,1613	0/0:13,0:16:21.07:0,21,938	0/0:32,0:35:66.21:0,66,3482	1/1:9,12:23:24.04:793,24,0	0/1:13,0:27:90.13:661,0,90	1/1:9,0:21:33.11:1075,33,0	1/1:3,0:6:9.03:293,9,0
chr10	5055479	.	C	CTAAAA	16640.87	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-16.075;DP=822;FS=2.144;HRun=0;HaplotypeScore=130.8259;InbreedingCoeff=0.9991;MQ=76.75;MQ0=0;MQRankSum=-5.422;QD=64.75;ReadPosRankSum=4.355;VQSLOD=5.9165;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,37:44:93.32:2840,93,0	0/0:10,0:10:30.07:0,30,552	0/0:17,0:17:27.13:0,27,664	0/0:28,0:27:66.95:0,67,1085	0/0:34,0:34:84.24:0,84,1566	0/0:25,0:25:69.20:0,69,1361	0/0:25,0:25:69.18:0,69,1263	0/0:46,0:46:99:0,126,2550	0/0:25,0:25:69.22:0,69,1392	0/0:36,0:36:99:0,105,2153	0/0:20,0:20:54.17:0,54,1065	0/0:30,0:30:81.28:0,81,1669	0/0:27,0:27:78.22:0,78,1592	0/0:33,0:33:90.23:0,90,1659	1/1:3,39:44:90.31:2690,90,0	1/1:3,20:24:51.18:1543,51,0	1/1:2,13:15:42.14:1287,42,0	1/1:1,11:12:21.07:650,21,0	0/0:35,0:35:99:0,99,1832	0/0:34,0:34:90.28:0,90,1756	0/0:44,0:44:99:0,126,2472	0/0:38,0:38:99:0,114,2258	0/0:37,0:37:99:0,105,2103	0/0:21,0:21:57.16:0,57,1085	1/1:2,20:22:51.18:1579,51,0	1/1:6,30:41:54.33:2987,54,0	1/1:1,34:38:66.23:2043,66,0	1/1:0,16:17:33.11:1022,33,0
chr10	5056627	.	CAAAAAGAGGTGGCTCAAAAAAAAAAAAAA	C	4379.52	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=7.547;DP=453;FS=50.454;HRun=0;HaplotypeScore=302.0373;InbreedingCoeff=0.9134;MQ=77.37;MQ0=3;MQRankSum=-5.559;QD=61.68;ReadPosRankSum=4.447;VQSLOD=2.7342;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:16,9:25:14.87:1021,15,0	0/0:8,0:8:15.05:0,15,1108	0/0:28,0:17:16.94:0,17,269	0/0:17,0:12:17.75:0,18,393	0/0:24,0:24:48.16:0,48,3045	0/0:16,0:16:42.13:0,42,3264	0/0:11,0:11:30.09:0,30,1900	0/0:31,0:31:63.18:0,63,3197	0/0:15,0:15:27.04:0,27,1522	0/0:16,0:16:36.10:0,36,1851	0/0:15,0:15:27.09:0,27,1851	0/0:11,0:11:12.03:0,12,599	0/0:12,0:12:21.06:0,21,1008	0/0:10,0:10:12.04:0,12,828	0/0:18,0:18:33.10:0,33,1836	0/0:12,0:12:15.04:0,15,976	0/0:9,0:9:9.02:0,9,207	0/0:13,0:13:24.08:0,24,1266	0/0:12,0:12:12.03:0,12,917	0/0:17,0:17:39.13:0,39,2636	0/0:20,0:20:45.14:0,45,3050	0/0:15,0:15:30.06:0,30,1821	0/0:21,0:21:33.57:0,34,2247	0/0:20,0:20:48.16:0,48,3075	0/0:7,0:7:15.05:0,15,465	1/1:16,10:26:29.85:1628,30,0	1/1:8,8:16:14.92:1081,15,0	1/1:1,3:4:9.01:649,9,0
chr10	5056906	.	CT	C	1600.11	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=7.098;DP=522;FS=1.019;HRun=9;HaplotypeScore=59.1020;InbreedingCoeff=0.8811;MQ=75.87;MQ0=1;MQRankSum=-0.471;QD=20.51;ReadPosRankSum=3.525;VQSLOD=4.3491;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,22:27:63.02:577,63,0	0/0:9,0:9:21.05:0,21,233	0/0:22,0:14:23.06:0,23,198	0/0:25,0:19:32.12:0,32,272	0/0:23,0:23:69.20:0,69,795	0/0:16,0:16:45.13:0,45,519	0/0:10,1:11:5.61:0,6,307	0/0:30,0:30:69.19:0,69,779	0/0:19,0:19:39.12:0,39,450	0/0:19,0:19:42.12:0,42,485	0/0:13,0:13:36.08:0,36,397	0/0:19,0:19:57.15:0,57,636	0/0:23,0:23:60.16:0,60,675	0/0:13,1:13:8.66:0,9,353	0/0:21,0:21:63.15:0,63,712	0/0:22,0:22:51.14:0,51,580	0/0:25,0:25:60.16:0,60,681	0/0:38,1:39:83.76:0,84,1178	0/0:17,0:17:45.10:0,45,493	0/0:22,0:22:60.18:0,60,692	0/0:11,0:11:24.07:0,24,277	0/0:8,0:8:15.04:0,15,173	0/0:15,0:15:42.10:0,42,465	0/0:8,0:8:21.06:0,21,242	0/0:12,0:12:33.10:0,33,380	1/1:1,11:12:1.40:267,1,0	1/1:5,24:29:69.03:631,69,0	1/1:0,10:10:30.02:274,30,0
chr10	5057117	.	TA	T	2991	PASS	AB=0.531;AC=7;AF=0.125;AN=56;BaseQRankSum=10.917;DP=404;FS=0.457;HRun=1;HaplotypeScore=43.7881;InbreedingCoeff=0.8017;MQ=69.33;MQ0=1;MQRankSum=0.913;QD=33.23;ReadPosRankSum=2.324;VQSLOD=3.2312;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,30:30:75.25:1048,75,0	0/0:3,0:3:9.03:0,9,131	0/0:7,0:6:17.87:0,18,170	0/0:9,0:9:19.28:0,19,285	0/0:16,0:16:42.14:0,42,603	0/0:12,0:12:36.11:0,36,502	0/0:10,0:10:30.08:0,30,414	0/0:30,0:30:90.26:0,90,1217	0/0:12,0:12:36.08:0,36,486	0/0:17,0:17:51.16:0,51,706	0/0:13,0:13:39.12:0,39,549	0/0:19,0:19:53.87:0,54,714	0/0:12,0:12:36.12:0,36,525	0/0:13,0:13:39.12:0,39,552	0/0:10,0:10:30.07:0,30,400	0/0:11,0:11:33.11:0,33,467	0/0:30,0:30:88.80:0,89,1216	0/0:12,0:12:36.12:0,36,510	0/0:17,0:17:50.53:0,51,686	0/0:17,0:17:51.17:0,51,741	0/0:5,0:5:15.01:0,15,179	0/0:8,0:8:24.05:0,24,313	0/0:4,0:4:12.03:0,12,157	0/0:6,0:6:15.03:0,15,198	0/0:21,0:21:63.19:0,63,877	0/1:2,15:17:19.55:532,0,20	1/1:1,26:27:67.02:898,67,0	1/1:0,16:16:48.16:661,48,0
chr10	5059536	.	A	ATT	1586.33	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=11.628;DP=490;FS=1.554;HRun=11;HaplotypeScore=75.0639;InbreedingCoeff=0.8826;MQ=67.97;MQ0=4;MQRankSum=-5.153;QD=12.49;ReadPosRankSum=0.860;VQSLOD=2.0444;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,2:23:32.77:326,33,0	0/0:8,0:9:20.66:0,21,171	0/0:9,0:8:3.44:0,3,33	0/0:12,0:11:2.54:0,3,10	0/0:22,0:23:42.93:0,43,457	0/0:27,0:26:56.77:0,57,536	0/0:15,0:14:26.96:0,27,302	0/0:31,0:32:32.78:0,33,561	0/0:18,0:19:32.99:0,33,370	0/0:25,0:25:60.05:0,60,574	0/0:19,0:19:39.01:0,39,378	0/0:19,0:21:44.46:0,44,393	0/0:12,0:12:30.03:0,30,284	0/0:13,0:14:35.78:0,36,332	1/1:4,9:13:12.04:174,12,0	1/1:4,0:19:27.45:94,27,0	0/0:28,0:31:59.88:0,60,725	1/1:3,12:15:26.58:348,27,0	0/0:16,0:16:29.97:0,30,340	0/0:22,0:22:47.91:0,48,445	0/0:18,0:17:32.98:0,33,314	0/0:11,0:11:0.14:0,0,229	0/0:14,0:14:33.02:0,33,319	0/0:10,0:10:27.04:0,27,262	1/1:2,6:9:11.53:139,12,0	1/1:6,0:22:13.63:381,14,0	1/1:5,0:17:21.04:210,21,0	1/1:3,0:7:12.01:112,12,0
chr10	5063591	.	G	GGCA	17406.40	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-17.530;DP=778;FS=0.280;HRun=0;HaplotypeScore=98.5814;InbreedingCoeff=0.9992;MQ=91.72;MQ0=0;MQRankSum=-4.825;QD=56.88;ReadPosRankSum=3.198;VQSLOD=7.1179;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,47:50:99:2836,120,0	0/0:9,0:9:27.09:0,27,476	0/0:36,0:36:99:0,102,1636	0/0:28,0:28:78.25:0,78,1291	0/0:26,0:26:75.24:0,75,1292	0/0:12,0:12:36.12:0,36,626	0/0:29,0:29:87.28:0,87,1505	1/1:6,25:34:99:2118,99,0	0/0:33,0:33:96.32:0,96,1665	0/0:21,0:21:63.21:0,63,1079	0/0:22,0:22:63.67:0,64,1083	0/0:39,0:39:99:0,117,1954	0/0:25,0:25:72.21:0,72,1203	0/0:31,0:31:90.29:0,90,1558	1/1:3,31:35:87.27:2055,87,0	1/1:1,35:38:81.28:1910,81,0	1/1:1,41:43:99:2497,108,0	1/1:2,20:22:57.13:1261,57,0	0/0:21,0:21:60.10:0,60,912	0/0:31,0:31:93.30:0,93,1611	0/0:43,0:43:99:0,129,2249	0/0:16,0:16:45.15:0,45,793	0/0:18,0:18:54.19:0,54,950	0/0:32,0:32:93.26:0,93,1573	1/1:1,19:20:39.13:921,39,0	1/1:4,22:27:22.09:1477,22,0	1/1:1,24:27:72.25:1695,72,0	1/1:0,9:9:27.09:638,27,0
chr10	5064478	.	T	TG	2933.21	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=12.606;DP=635;FS=7.436;HRun=5;HaplotypeScore=73.6191;InbreedingCoeff=0.9953;MQ=69.97;MQ0=6;MQRankSum=-2.355;QD=31.20;ReadPosRankSum=1.084;VQSLOD=4.2473;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,29:32:84.27:1105,84,0	0/0:11,0:11:33.08:0,33,352	0/0:21,0:17:36.05:0,36,380	0/0:15,0:12:24.06:0,24,257	0/0:22,0:21:60.15:0,60,643	0/0:33,0:33:93.15:0,93,976	0/0:27,0:27:75.12:0,75,783	0/0:19,0:19:54.13:0,54,575	0/0:23,0:23:69.17:0,69,741	0/0:15,0:15:45.11:0,45,484	0/0:23,0:23:57.13:0,57,603	0/0:29,0:29:71.97:0,72,773	0/0:19,0:19:45.11:0,45,484	0/0:18,0:18:45.11:0,45,484	0/0:27,0:27:71.96:0,72,744	0/0:23,0:21:63.16:0,63,677	0/0:41,0:40:99:0,108,1160	0/0:24,0:23:66.13:0,66,697	0/0:13,0:13:36.02:0,36,359	0/0:25,0:25:72.01:0,72,749	0/0:32,0:32:72.17:0,72,767	0/0:23,0:23:63.16:0,63,677	0/0:21,0:20:53.97:0,54,562	0/0:13,0:13:30.03:0,30,310	0/0:24,0:24:69.17:0,69,741	1/1:4,26:30:19.68:903,20,0	1/1:6,19:24:65.99:848,66,0	1/1:1,6:6:18.06:237,18,0
chr10	5065289	.	G	GC	2342.46	PASS	AB=0.556;AC=7;AF=0.125;AN=56;BaseQRankSum=12.975;DP=737;FS=1.002;HRun=0;HaplotypeScore=109.6500;InbreedingCoeff=0.8359;MQ=74.71;MQ0=0;MQRankSum=-12.434;QD=32.53;ReadPosRankSum=3.730;VQSLOD=3.3050;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,17:18:54.14:679,54,0	0/0:13,0:13:30.10:0,30,418	0/0:12,0:12:36.04:0,36,438	0/0:17,0:17:44.97:0,45,567	0/0:22,0:22:63.68:0,64,880	0/0:34,0:34:99:0,102,1424	0/0:29,0:29:84.25:0,84,1141	0/0:40,0:40:99:0,111,1536	0/0:36,0:36:99:0,102,1373	0/0:33,0:33:90.24:0,90,1199	0/0:22,0:22:60.20:0,60,837	0/0:35,0:35:99:0,102,1403	0/0:34,0:34:99:0,102,1407	0/0:32,0:32:96.31:0,96,1326	0/0:31,0:31:93.31:0,93,1301	0/0:30,0:30:87.29:0,87,1216	0/0:38,0:38:99:0,114,1594	0/0:16,0:16:45.11:0,45,607	0/0:24,0:24:69.23:0,69,965	0/0:26,0:26:72.18:0,72,965	0/0:53,0:53:99:0,153,2103	0/0:16,0:16:48.12:0,48,648	0/0:14,0:14:39.13:0,39,544	0/0:38,0:38:99:0,114,1578	0/0:20,0:20:60.20:0,60,839	0/1:4,16:20:31.54:569,0,32	1/1:0,26:26:72.10:915,72,0	1/1:1,7:8:24.08:328,24,0
chr10	5065295	.	TGTGG	T	3563.66	PASS	AB=0.531;AC=7;AF=0.125;AN=56;BaseQRankSum=13.070;DP=690;FS=1.657;HRun=0;HaplotypeScore=140.5499;InbreedingCoeff=0.8352;MQ=77.52;MQ0=0;MQRankSum=-12.755;QD=52.41;ReadPosRankSum=4.163;VQSLOD=4.6511;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,17:17:50.66:920,51,0	0/0:13,0:13:36.12:0,36,976	0/0:14,0:14:36.11:0,36,923	0/0:18,0:18:42.61:0,43,1047	0/0:18,0:18:41.98:0,42,1130	0/0:27,0:27:81.25:0,81,2218	0/0:29,0:29:87.30:0,87,2503	0/0:36,0:36:99:0,105,2869	0/0:36,0:36:99:0,108,2966	0/0:26,0:26:69.23:0,69,1857	0/0:19,0:19:51.18:0,51,1415	0/0:36,0:36:99:0,105,2994	0/0:35,0:35:99:0,105,2964	0/0:34,0:34:99:0,102,2720	0/0:36,0:36:99:0,108,3113	0/0:29,0:29:87.30:0,87,2522	0/0:36,0:36:99:0,108,3065	0/0:16,0:16:48.16:0,48,1390	0/0:24,0:24:72.25:0,72,2042	0/0:18,0:18:54.19:0,54,1557	0/0:47,0:47:99:0,138,3785	0/0:11,0:11:30.09:0,30,755	0/0:14,0:14:42.13:0,42,1143	0/0:35,0:35:99:0,105,3026	0/0:15,0:15:45.14:0,45,1172	0/1:2,15:17:99:812,0,111	1/1:0,26:26:72.25:1406,72,0	1/1:1,7:8:21.54:426,22,0
chr10	5065307	.	C	CA	3682.21	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=10.851;DP=664;FS=5.803;HRun=0;HaplotypeScore=100.5291;InbreedingCoeff=0.9980;MQ=77.24;MQ0=0;MQRankSum=-12.698;QD=40.02;ReadPosRankSum=1.263;VQSLOD=3.8217;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,28:28:60.20:954,60,0	0/0:10,0:10:27.09:0,27,377	0/0:14,0:14:39.11:0,39,508	0/0:18,0:18:33.11:0,33,456	0/0:13,0:13:36.10:0,36,484	0/0:28,0:28:78.26:0,78,1085	0/0:29,0:29:84.26:0,84,1157	0/0:37,0:37:99:0,99,1346	0/0:34,0:34:99:0,102,1407	0/0:26,0:26:72.24:0,72,1000	0/0:16,0:16:45.15:0,45,629	0/0:32,0:32:93.31:0,93,1300	0/0:33,0:33:93.27:0,93,1277	0/0:30,0:30:90.27:0,90,1224	0/0:37,0:37:99:0,108,1493	0/0:27,0:27:81.24:0,81,1111	0/0:30,0:30:90.27:0,90,1224	0/0:17,0:17:51.13:0,51,691	0/0:20,0:20:57.16:0,57,774	0/0:17,0:17:51.17:0,51,712	0/0:35,0:35:99:0,105,1468	0/0:12,0:12:33.07:0,33,411	0/0:13,0:13:33.11:0,33,461	0/0:33,0:33:99:0,99,1380	0/0:11,0:11:33.11:0,33,461	1/1:3,21:24:21.24:912,21,0	1/1:0,31:30:87.30:1386,87,0	1/1:0,9:9:27.09:430,27,0
chr10	5070033	.	CGTGTGTGTGT	C	1353.69	PASS	AC=18;AF=0.333;AN=54;BaseQRankSum=6.540;DP=416;FS=0.000;HRun=0;HaplotypeScore=118.0233;InbreedingCoeff=0.6604;MQ=68.71;MQ0=27;MQRankSum=-5.735;QD=8.96;ReadPosRankSum=-0.111;VQSLOD=2.2489;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:26:5.96:142,6,0	0/0:7,0:6:3.01:0,3,70	0/0:27,0:13:2.37:0,2,8	./.	0/0:16,0:16:18.04:0,18,523	0/0:10,0:9:12:0,12,445	0/0:15,0:14:12.04:0,12,464	0/0:34,0:33:15.05:0,15,389	0/0:4,0:4:6:0,6,173	0/0:14,0:14:21.04:0,21,793	0/0:13,0:11:6.02:0,6,219	0/0:15,0:15:14.59:0,15,436	0/0:6,0:5:4.83:0,5,140	0/0:13,0:10:12.01:0,12,235	1/1:15,0:15:15.05:349,15,0	1/1:21,0:19:18.06:432,18,0	1/1:23,0:22:6.02:80,6,0	1/1:13,0:12:4.82:137,5,0	0/0:23,0:20:15.05:0,15,738	0/0:10,0:9:3.01:0,3,145	0/0:12,0:9:15.05:0,15,478	0/0:8,0:8:3.01:0,3,122	0/0:8,0:8:12.04:0,12,531	0/0:13,0:13:21.07:0,21,797	1/1:16,0:16:6.02:140,6,0	1/1:14,1:15:2.96:20,3,0	1/1:7,2:10:2.55:87,3,0	1/1:7,4:12:6.02:138,6,0
chr10	5070067	.	TGTGTGTGTGTGTGTGCGCGCGCGCGC	T	2549.34	PASS	AB=1.000;AC=7;AF=0.130;AN=54;BaseQRankSum=5.911;DP=372;FS=4.960;HRun=0;HaplotypeScore=152.3214;InbreedingCoeff=0.3856;MQ=45.00;MQ0=39;MQRankSum=-6.088;QD=27.71;ReadPosRankSum=4.354;VQSLOD=1.7106;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:34:12.02:0,12,282	0/0:5,0:3:6.02:0,6,167	0/0:6,0:1:2.99:0,3,24	./.	0/0:14,0:14:27.09:0,27,1621	0/0:12,0:11:21.07:0,21,1757	0/0:18,0:15:36.11:0,36,2143	0/0:18,0:16:44.93:0,45,1521	0/0:4,0:3:9.03:0,9,528	0/0:16,0:15:42.14:0,42,2651	0/0:13,0:12:18.06:0,18,1342	0/0:13,0:13:17:0,17,1089	0/0:6,0:5:7.27:0,7,530	0/0:8,0:5:12.04:0,12,576	1/1:5,10:15:16.72:989,17,0	0/1:17,0:16:2.90:975,0,3	0/1:30,0:28:38.76:58,0,39	0/1:17,0:16:36.42:292,0,36	0/0:11,0:7:18.06:0,18,1821	0/0:9,0:7:11.97:0,12,755	0/0:15,0:12:21.07:0,21,1248	0/0:5,0:4:2.47:0,2,241	0/0:11,0:11:24.08:0,24,1897	0/0:18,0:16:36.12:0,36,2914	1/1:12,1:13:6.02:367,6,0	0/0:17,0:16:36.10:0,36,817	0/0:10,0:7:6.02:0,6,166	0/0:12,0:11:21.07:0,21,698
chr10	5070069	.	TGTGTGTGTGTGTGCGCGCGCGCGC	T	2524.50	PASS	AB=1.000;AC=9;AF=0.167;AN=54;BaseQRankSum=6.089;DP=362;FS=6.794;HRun=0;HaplotypeScore=139.5245;InbreedingCoeff=0.6340;MQ=45.42;MQ0=38;MQRankSum=-6.164;QD=30.05;ReadPosRankSum=4.379;VQSLOD=1.7936;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:34:9.01:0,9,168	0/0:6,0:4:6.01:0,6,118	0/0:4,0:1:2.98:0,3,21	./.	0/0:15,0:15:30.10:0,30,1555	0/0:13,0:12:27.09:0,27,1847	0/0:18,0:15:33.11:0,33,1873	0/0:17,0:15:41.89:0,42,1201	0/0:4,0:3:9.03:0,9,477	0/0:15,0:14:42.14:0,42,2367	0/0:12,0:11:18.06:0,18,1232	0/0:13,0:13:16.85:0,17,934	0/0:6,0:5:6.91:0,7,485	0/0:7,0:4:12.04:0,12,478	1/1:12,0:12:17.02:823,17,0	1/1:15,0:15:18.06:963,18,0	0/1:30,0:28:14.79:110,0,15	1/1:8,9:16:5.21:396,5,0	0/0:12,0:9:21.07:0,21,1807	0/0:9,0:7:9.03:0,9,685	0/0:14,0:11:21.07:0,21,1068	0/0:6,0:5:5.25:0,5,301	0/0:12,0:12:27.09:0,27,1890	0/0:19,0:17:39.13:0,39,2704	1/1:4,5:9:6.02:378,6,0	0/0:14,0:13:35.12:0,35,667	0/0:10,0:7:6.02:0,6,140	0/0:13,0:12:27.07:0,27,722
chr10	5070071	.	TGTGTGTGTGTGC	T	1954.60	PASS	AB=1.000;AC=19;AF=0.352;AN=54;BaseQRankSum=6.028;DP=353;FS=0.676;HRun=0;HaplotypeScore=87.8950;InbreedingCoeff=0.7118;MQ=45.55;MQ0=37;MQRankSum=-2.677;QD=12.45;ReadPosRankSum=1.848;VQSLOD=0.9978;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:5,29:32:5.96:209,6,0	0/0:6,0:4:3.01:0,3,70	0/0:3,0:1:2.37:0,2,8	./.	0/0:15,0:15:29.68:0,30,628	0/0:13,0:12:12.27:0,12,729	0/0:17,0:14:17.15:0,17,653	0/0:16,0:14:19.48:0,19,723	0/0:4,0:3:6.89:0,7,210	0/0:15,0:14:35.84:0,36,1165	0/0:12,0:11:17.82:0,18,562	0/0:13,0:13:17.37:0,17,579	0/0:6,0:5:5.45:0,5,167	0/0:7,0:4:12.01:0,12,237	1/1:12,0:12:14.33:403,14,0	1/1:8,0:16:18.06:516,18,0	1/1:28,0:26:2.90:103,3,0	1/1:14,0:13:6.02:167,6,0	0/0:13,0:10:6.03:0,6,814	0/0:8,0:6:9.02:0,9,236	0/0:14,0:11:20.49:0,20,518	0/1:6,0:5:8.43:8,0,120	0/0:12,0:12:26.99:0,27,843	0/0:19,0:17:26.93:0,27,1160	1/1:9,0:9:6.02:168,6,0	1/1:14,0:13:19.92:157,20,0	1/1:11,0:8:7.64:129,8,0	1/1:12,0:11:23.16:279,23,0
chr10	5070075	.	TGTGTGTGCGCGCGCGCGC	T	2093	PASS	AB=1.000;AC=12;AF=0.222;AN=54;BaseQRankSum=7.395;DP=329;FS=12.428;HRun=0;HaplotypeScore=103.1223;InbreedingCoeff=0.5734;MQ=50.10;MQ0=32;MQRankSum=-5.916;QD=23.26;ReadPosRankSum=3.471;VQSLOD=1.1018;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:30:5.95:0,6,42	0/0:5,0:3:2.99:0,3,23	./.	0/1:2,0:2:5.03:5,0,22	0/0:14,0:14:24.08:0,24,1086	0/0:11,0:10:24.08:0,24,1462	0/0:19,0:15:39.13:0,39,1590	0/0:15,0:13:35.85:0,36,582	0/0:3,0:2:6.02:0,6,351	0/0:14,0:13:39.13:0,39,1579	0/0:12,0:11:18.06:0,18,877	0/0:11,0:11:11.09:0,11,511	0/0:6,0:5:6.42:0,6,373	0/0:5,0:2:6.01:0,6,228	1/1:12,0:12:17.27:615,17,0	1/1:13,0:13:18.06:754,18,0	1/1:8,20:26:4.89:312,5,0	1/1:14,0:13:6.02:276,6,0	0/0:12,0:10:21.07:0,21,1417	0/0:7,0:5:9.03:0,9,535	0/0:14,0:11:21.07:0,21,639	0/0:7,0:6:8.34:0,8,372	0/0:12,0:12:27.09:0,27,1401	0/0:19,0:17:39.13:0,39,1887	1/1:9,0:9:6.02:276,6,0	0/0:11,0:10:21.52:0,22,448	0/0:10,0:7:2.53:0,3,129	0/1:12,0:11:9.46:9,0,460
chr10	5070081	.	TGC	T	567.67	PASS	AB=0.979;AC=26;AF=0.500;AN=52;BaseQRankSum=4.823;DP=329;FS=1.648;HRun=0;HaplotypeScore=51.0032;InbreedingCoeff=0.2898;MQ=50.45;MQ0=31;MQRankSum=-1.870;QD=2.42;ReadPosRankSum=1.528;VQSLOD=1.6063;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:32,0:30:5.81:32,6,0	./.	./.	0/1:3,0:2:3.51:4,0,10	0/1:12,0:12:3.24:3,0,59	0/0:11,0:10:6.16:0,6,142	0/1:17,0:13:28.66:29,0,108	0/1:15,0:14:4.81:5,0,29	0/0:3,0:2:3.90:0,4,49	0/0:12,0:11:14.65:0,15,92	0/0:13,0:12:12.36:0,12,64	0/0:11,0:11:0.59:0,1,1	0/0:6,0:6:6.55:0,7,41	0/1:4,1:2:16.96:29,0,17	1/1:11,0:11:11.36:56,11,0	1/1:13,0:13:17.04:84,17,0	1/1:27,0:25:5.66:28,6,0	1/1:14,0:13:5.68:28,6,0	0/0:12,0:10:1.91:0,2,115	0/0:8,0:6:7.15:0,7,44	0/0:12,0:9:5.44:0,5,23	0/1:6,0:5:8.17:8,0,19	0/1:13,0:13:2.51:3,0,121	0/1:19,0:17:2.92:3,0,42	1/1:8,0:9:5.68:28,6,0	1/1:4,9:12:20.90:161,21,0	1/1:10,0:7:5.97:45,6,0	1/1:16,0:15:26.09:185,26,0
chr10	5071343	.	ATT	A	4617.77	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=7.116;DP=689;FS=1.500;HRun=13;HaplotypeScore=89.9215;InbreedingCoeff=0.9906;MQ=68.44;MQ0=2;MQRankSum=-0.030;QD=20.80;ReadPosRankSum=4.741;VQSLOD=4.6207;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,38:46:95.81:931,96,0	0/0:10,0:10:21.07:0,21,304	0/0:37,0:21:23.91:0,24,267	0/0:13,0:6:12.03:0,12,142	0/0:24,0:24:63.17:0,63,878	0/0:33,0:35:95.26:0,95,1256	0/0:21,0:23:59.68:0,60,806	0/0:10,0:26:18.64:0,19,200	0/0:20,0:20:57.15:0,57,797	0/0:23,0:26:71.68:0,72,932	0/0:22,0:22:57.16:0,57,775	0/0:23,0:23:60.20:0,60,868	0/0:21,0:21:48.15:0,48,676	0/0:27,0:27:71.68:0,72,979	1/1:7,44:50:99:990,102,0	0/0:7,0:36:35.32:0,35,229	1/1:2,27:30:63.03:661,63,0	1/1:1,20:22:50.82:477,51,0	0/0:17,0:17:47.66:0,48,581	0/0:27,0:31:83.22:0,83,1082	0/0:11,0:11:23.87:0,24,317	0/0:22,0:22:54.14:0,54,725	0/0:23,0:24:57.17:0,57,784	0/0:17,0:17:48.16:0,48,695	1/1:0,10:10:30.05:291,30,0	1/1:4,20:24:18.06:500,18,0	1/1:4,23:28:56.25:524,56,0	1/1:1,9:11:26.78:245,27,0
chr10	5071679	.	ATGAT	A	2918.21	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=8.062;DP=664;FS=5.727;HRun=0;HaplotypeScore=112.2623;InbreedingCoeff=0.9992;MQ=88.23;MQ0=0;MQRankSum=-4.165;QD=38.91;ReadPosRankSum=3.583;VQSLOD=3.6101;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:72.25:0,72,1844	0/0:9,0:9:27.04:0,27,595	0/0:25,0:25:56.82:0,57,1423	0/0:22,0:23:58.70:0,59,1322	0/0:31,0:31:90.28:0,90,2239	0/0:41,0:41:99:0,108,2646	0/0:23,0:23:69.24:0,69,1751	0/0:44,0:44:99:0,117,3015	0/0:22,0:22:66.20:0,66,1588	0/0:31,0:31:93.31:0,93,2346	0/0:19,0:19:48.16:0,48,1235	0/0:30,0:30:84.29:0,84,2200	0/0:34,0:34:99:0,99,2526	0/0:21,0:21:57.20:0,57,1488	1/1:1,29:30:69.24:1246,69,0	0/0:25,0:25:72.25:0,72,1830	1/1:1,20:21:45.04:775,45,0	1/1:0,10:10:27.09:491,27,0	0/0:22,0:22:57.17:0,57,1349	0/0:29,0:29:78.27:0,78,1958	0/0:13,0:13:30.09:0,30,731	0/0:20,0:20:54.19:0,54,1381	0/0:17,0:17:51.17:0,51,1303	0/0:16,0:16:39.13:0,39,956	1/1:0,14:14:33.11:566,33,0	0/0:30,0:30:84.28:0,84,2132	0/0:25,0:25:66.17:0,66,1578	0/0:15,0:15:45.15:0,45,1111
chr10	5071711	.	G	GA	1969.86	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-9.073;DP=625;FS=2.201;HRun=9;HaplotypeScore=69.7783;InbreedingCoeff=0.9887;MQ=75.27;MQ0=0;MQRankSum=-0.958;QD=22.13;ReadPosRankSum=1.897;VQSLOD=4.6261;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,28:31:32.40:808,32,0	0/0:8,0:8:24:0,24,208	0/0:12,0:11:14.85:0,15,112	0/0:15,0:16:26.02:0,26,213	0/0:32,0:32:68.96:0,69,599	0/0:34,0:34:95.96:0,96,830	0/0:24,0:24:62.95:0,63,542	0/0:34,0:34:72.41:0,72,604	0/0:19,0:19:44.98:0,45,390	0/0:31,0:31:83.97:0,84,727	0/0:15,0:15:15.77:0,16,335	0/0:33,0:33:89.95:0,90,777	0/0:34,0:34:83.97:0,84,729	0/0:22,0:22:59.95:0,60,517	0/0:25,0:25:62.97:0,63,543	0/0:24,0:24:65.98:0,66,573	0/0:27,0:27:59.96:0,60,516	0/0:10,0:10:24:0,24,208	0/0:18,0:18:44.98:0,45,391	0/0:30,0:30:83.96:0,84,725	0/0:11,0:11:32.99:0,33,286	0/0:21,0:21:50.98:0,51,442	0/0:24,0:24:68.94:0,69,592	0/0:14,0:14:41.03:0,41,345	0/0:18,0:18:44.99:0,45,391	1/1:4,20:24:31.06:559,31,0	1/1:4,21:25:48.13:531,48,0	1/1:2,7:9:21.06:232,21,0
chr10	5074319	.	G	GGGGCT	12425.38	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=12.055;DP=666;FS=8.523;HRun=0;HaplotypeScore=140.4684;InbreedingCoeff=0.9021;MQ=79.99;MQ0=0;MQRankSum=-17.345;QD=66.09;ReadPosRankSum=1.989;VQSLOD=6.1393;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,24:33:75.26:2243,75,0	0/0:15,0:15:42.14:0,42,870	0/0:23,0:23:53.51:0,54,941	0/0:19,0:19:53.60:0,54,1037	0/0:15,0:15:39.13:0,39,831	0/0:21,0:21:54.19:0,54,1151	0/0:34,0:34:93.32:0,93,1982	0/0:31,0:31:87.27:0,87,1744	0/0:29,0:29:84.29:0,84,1762	0/0:26,0:26:78.27:0,78,1624	0/0:13,0:13:36.12:0,36,714	0/0:31,0:31:87.28:0,87,1787	0/0:32,0:32:96.33:0,96,2008	0/0:23,0:23:66.21:0,66,1292	1/1:8,27:35:90.30:2695,90,0	0/1:10,0:10:12.58:13,0,93	1/1:9,20:29:60.21:1798,60,0	1/1:3,13:18:33.11:999,33,0	0/0:20,0:20:57.15:0,57,1035	0/0:15,0:15:42.12:0,42,816	0/0:52,0:52:99:0,141,2831	0/0:25,0:25:69.24:0,69,1446	0/0:23,0:23:66.22:0,66,1305	0/0:31,0:31:90.31:0,90,1874	1/1:5,10:16:39.13:1137,39,0	1/1:5,16:21:63.17:1774,63,0	1/1:4,15:24:54.18:1585,54,0	1/1:0,2:2:6.02:182,6,0
chr10	5075243	.	TC	T	7826.69	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=18.993;DP=844;FS=3.598;HRun=5;HaplotypeScore=94.3590;InbreedingCoeff=1.0000;MQ=80.89;MQ0=0;MQRankSum=-2.540;QD=31.56;ReadPosRankSum=5.076;VQSLOD=5.0059;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,44:44:99:1448,129,0	0/0:14,0:14:42.13:0,42,559	0/0:28,0:28:75.20:0,75,989	0/0:22,0:22:63.20:0,63,832	0/0:23,0:23:69.22:0,69,927	0/0:16,0:16:45.15:0,45,615	0/0:25,0:25:66.18:0,66,854	0/0:30,0:30:90.29:0,90,1218	0/0:25,0:25:72.21:0,72,950	0/0:31,0:31:90.28:0,90,1189	0/0:23,0:23:66.21:0,66,886	0/0:50,0:50:99:0,144,1934	0/0:47,0:47:99:0,138,1860	0/0:36,0:36:99:0,105,1436	1/1:2,44:46:99:1497,132,0	0/0:49,0:49:99:0,144,1924	1/1:1,23:24:60.17:681,60,0	1/1:0,27:27:78.22:885,78,0	0/0:23,0:23:60.17:0,60,796	0/0:32,0:32:87.29:0,87,1188	0/0:45,0:45:99:0,123,1648	0/0:27,0:27:75.22:0,75,988	0/0:23,0:23:69.23:0,69,944	0/0:27,0:27:78.25:0,78,1048	1/1:2,25:27:72.21:817,72,0	1/1:1,38:39:73.26:1207,73,0	1/1:1,27:28:75.21:850,75,0	1/1:0,13:13:39.11:442,39,0
chr10	5075914	.	TAC	T	941.16	PASS	AB=0.915;AC=19;AF=0.365;AN=52;BaseQRankSum=5.864;DP=766;FS=10.983;HRun=0;HaplotypeScore=104.8465;InbreedingCoeff=-0.0899;MQ=62.71;MQ0=24;MQRankSum=-0.193;QD=2.27;ReadPosRankSum=0.961;VQSLOD=1.4395;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:24:17.41:0,17,195	0/1:13,2:15:27.41:27,0,116	./.	./.	0/1:12,0:12:7.89:8,0,161	0/0:25,0:25:26.91:0,27,380	0/1:33,0:34:31.22:31,0,132	0/0:30,0:30:2.90:0,3,16	0/0:31,0:31:10.54:0,11,340	0/1:21,0:21:8.39:8,0,241	0/1:13,0:14:16.04:16,0,115	0/1:28,5:33:10.49:10,0,203	0/1:28,0:28:9.26:9,0,343	0/0:18,0:18:8.11:0,8,215	0/1:33,2:37:99:110,0,296	0/1:26,17:45:8.97:284,0,9	1/1:11,5:15:15.38:146,15,0	0/0:24,0:24:13.04:0,13,225	0/0:22,0:22:13.27:0,13,140	0/1:22,0:22:35.39:56,0,35	0/0:51,0:51:30.58:0,31,493	0/0:18,0:18:15.02:0,15,191	0/0:28,0:28:15.04:0,15,197	0/1:46,5:51:46.23:46,0,440	0/1:22,3:25:34.76:35,0,281	1/1:20,4:24:12:119,12,0	1/1:18,6:25:20.44:170,20,0	0/1:7,2:9:30.34:30,0,56
chr10	5076124	.	G	GGT	9958.68	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-6.222;DP=881;FS=15.200;HRun=0;HaplotypeScore=119.3097;InbreedingCoeff=0.9994;MQ=74.47;MQ0=1;MQRankSum=0.114;QD=36.35;ReadPosRankSum=3.512;VQSLOD=6.1762;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,38:49:96.32:1550,96,0	0/0:14,0:14:33.10:0,33,409	0/0:33,0:34:62.03:0,62,720	0/0:38,0:36:72.17:0,72,851	0/0:11,0:11:24.08:0,24,298	0/0:28,0:29:69.05:0,69,832	0/0:30,0:30:63.20:0,63,781	0/0:45,0:46:96.08:0,96,1110	0/0:24,0:24:66.21:0,66,817	0/0:19,0:19:44.48:0,44,508	0/0:15,0:15:36.08:0,36,409	0/0:37,0:37:99:0,102,1253	0/0:35,0:35:81.04:0,81,979	0/0:32,0:33:90.03:0,90,1017	1/1:6,43:50:99:2064,126,0	0/0:43,0:43:99:0,108,1308	1/1:15,29:45:81.11:1291,81,0	1/1:7,27:34:78.27:1266,78,0	0/0:25,0:26:42.79:0,43,473	0/0:20,0:20:54.14:0,54,643	0/0:79,0:81:99:0,186,2241	0/0:18,0:18:45.07:0,45,484	0/0:18,0:18:35.32:0,35,416	0/0:36,0:36:99:0,102,1264	1/1:3,22:25:63.22:1033,63,0	1/1:5,31:36:56.12:1429,56,0	1/1:5,18:24:54.18:883,54,0	1/1:1,9:10:27.09:443,27,0
chr10	5077317	.	AGTGCTCCCTT	A	1039.06	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.031;DP=576;FS=30.507;HRun=0;HaplotypeScore=178.1512;InbreedingCoeff=0.9829;MQ=76.68;MQ0=0;MQRankSum=-5.393;QD=51.95;ReadPosRankSum=0.701;VQSLOD=1.7097;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,11:20:36.12:1134,36,0	0/0:6,0:6:15.05:0,15,703	0/0:12,0:12:27.09:0,27,1325	0/0:15,0:15:39.13:0,39,1836	0/0:22,0:22:57.20:0,57,2933	0/0:15,0:15:36.12:0,36,1737	0/0:17,0:17:48.16:0,48,2471	0/0:30,0:30:66.23:0,66,3279	0/0:16,0:16:42.14:0,42,2040	0/0:32,0:32:75.26:0,75,3799	0/0:20,0:20:57.20:0,57,2768	0/0:30,0:30:81.27:0,81,3896	0/0:20,0:20:54.19:0,54,2736	0/0:22,0:22:63.22:0,63,3030	0/0:30,0:30:78.27:0,78,3786	0/0:27,0:27:72.25:0,72,3680	0/0:20,0:20:39.13:0,39,1795	0/0:21,0:21:54.19:0,54,2673	0/0:21,0:21:57.19:0,57,2441	0/0:15,0:15:39.13:0,39,1966	0/0:20,0:20:54.19:0,54,2769	0/0:12,0:12:36.11:0,36,1699	0/0:18,0:18:48.16:0,48,2360	0/0:18,0:18:45.15:0,45,2319	0/0:19,0:19:48.16:0,48,2391	0/0:35,0:35:90.31:0,90,4194	0/0:28,0:28:72.15:0,72,3290	0/0:15,0:15:42.14:0,42,1696
chr10	5077376	.	T	TGCTAAGTGCAA	31471.48	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-6.307;DP=762;FS=17.433;HRun=0;HaplotypeScore=228.3822;InbreedingCoeff=0.9983;MQ=75.42;MQ0=0;MQRankSum=-20.186;QD=131.13;ReadPosRankSum=-1.470;VQSLOD=3.7388;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:17,21:40:90.27:4339,90,0	0/0:6,0:7:18.06:0,18,607	0/0:18,0:18:51.17:0,51,1449	0/0:21,0:21:56.40:0,56,1630	0/0:20,0:20:57.20:0,57,1996	0/0:18,0:17:54.19:0,54,1811	0/0:35,0:35:99:0,102,3379	0/0:40,0:40:99:0,114,3553	0/0:24,0:24:69.22:0,69,2259	0/0:39,0:39:99:0,111,3849	0/0:19,0:19:57.15:0,57,1661	0/0:43,0:43:99:0,120,3959	0/0:29,0:29:87.30:0,87,3013	0/0:20,0:20:60.21:0,60,2114	1/1:17,33:52:99:7291,148,0	0/0:27,0:27:78.27:0,78,2612	1/1:5,10:19:42.14:2179,42,0	1/1:15,9:25:60.16:3201,60,0	0/0:14,0:14:42.14:0,42,1414	0/0:25,0:25:72.23:0,72,2417	0/0:56,0:56:99:0,169,5700	0/0:17,0:17:51.18:0,51,1793	0/0:20,0:20:57.20:0,57,1956	0/0:30,0:30:81.26:0,81,2688	1/1:5,15:23:60.16:3051,60,0	1/1:15,14:33:90.29:4495,90,0	1/1:9,26:38:99:5563,105,0	1/1:3,7:10:24.08:1353,24,0
chr10	5078064	.	C	CA	6487.33	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=-14.888;DP=682;FS=6.179;HRun=6;HaplotypeScore=63.1382;InbreedingCoeff=0.8833;MQ=72.04;MQ0=1;MQRankSum=-0.958;QD=29.76;ReadPosRankSum=1.251;VQSLOD=5.6056;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,27:28:69.22:868,69,0	0/0:12,0:12:30.06:0,30,306	0/1:16,0:12:11.88:12,0,46	0/0:10,0:9:7.96:0,8,73	0/0:37,0:37:99:0,108,1094	0/0:22,0:22:57.13:0,57,581	0/0:23,0:23:60.13:0,60,612	0/0:36,0:36:90.19:0,90,917	0/0:21,0:21:60.13:0,60,612	0/0:32,0:32:90.20:0,90,918	0/0:30,0:30:72.16:0,72,734	0/0:31,0:31:87.19:0,87,887	0/0:21,0:21:54.12:0,54,550	0/0:28,0:28:72.16:0,72,735	1/1:5,26:31:72.23:902,72,0	0/0:39,0:39:99:0,105,1063	1/1:1,26:27:72.23:906,72,0	1/1:2,25:26:72.23:906,72,0	0/0:33,0:33:90.17:0,90,901	0/0:17,0:17:48.11:0,48,490	0/0:11,0:11:33.08:0,33,337	0/0:19,0:19:54.12:0,54,551	0/0:19,0:19:48.10:0,48,490	0/0:22,0:22:57.12:0,57,581	1/1:3,25:28:78.22:965,78,0	1/1:6,18:24:6.51:647,7,0	1/1:0,32:32:93.30:1170,93,0	1/1:2,3:5:9.03:113,9,0
chr10	5078570	.	T	TG	6522.82	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-15.409;DP=739;FS=1.005;HRun=7;HaplotypeScore=68.0905;InbreedingCoeff=0.9995;MQ=74.53;MQ0=0;MQRankSum=-1.549;QD=29.78;ReadPosRankSum=3.169;VQSLOD=5.2966;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,32:36:90.28:1087,90,0	0/0:10,0:10:27.04:0,27,261	0/0:17,0:17:31.73:0,32,264	0/0:15,0:14:36.05:0,36,347	0/0:31,0:31:84.07:0,84,791	0/0:16,0:16:48.05:0,48,456	0/0:21,0:21:60.10:0,60,579	0/0:32,0:32:87.13:0,87,840	0/0:30,0:30:87.12:0,87,834	0/0:35,0:35:90.13:0,90,862	0/0:18,0:18:51.08:0,51,492	0/0:48,0:48:99:0,117,1129	0/0:32,0:32:81.11:0,81,776	0/0:27,0:27:81.13:0,81,780	1/1:4,28:32:78.24:942,78,0	0/0:38,0:38:99:0,108,1043	1/1:3,26:29:75.23:906,75,0	1/1:1,27:28:75.23:906,75,0	0/0:21,0:22:65.14:0,65,613	0/0:17,0:17:39.05:0,39,371	0/0:32,0:32:75.11:0,75,724	0/0:30,0:31:80.15:0,80,759	0/0:23,0:23:60.09:0,60,579	0/0:25,0:25:69.11:0,69,666	1/1:2,23:24:60.18:725,60,0	1/1:3,28:31:29.30:906,29,0	1/1:4,21:25:57.17:689,57,0	1/1:1,12:13:30.09:362,30,0
chr10	5083017	.	AAGTTGACTGGCTACCTTCCTGTAAGCAC	A	3542.17	PASS	AB=0.583;AC=1;AF=0.018;AN=56;BaseQRankSum=7.016;DP=794;FS=0.925;HRun=0;HaplotypeScore=553.9398;InbreedingCoeff=-0.0188;MQ=85.72;MQ0=0;MQRankSum=-6.186;QD=101.20;ReadPosRankSum=3.510;VQSLOD=1.9274;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,157,14166	0/0:6,0:6:18.06:0,18,2340	0/0:28,0:28:81.27:0,81,5176	0/0:25,0:25:19.06:0,19,3196	0/0:20,0:20:57.20:0,57,3685	0/0:24,0:24:69.24:0,69,7296	0/0:40,0:40:99:0,120,13068	0/0:34,0:34:93.28:0,93,6921	0/0:25,0:25:75.26:0,75,8247	0/0:31,0:31:90.31:0,90,7821	0/0:23,0:23:65.79:0,66,4576	0/0:32,0:32:93.32:0,93,10722	0/0:35,0:35:99:0,99,8996	0/0:38,0:38:99:0,111,11402	0/0:46,0:46:99:0,132,14136	0/1:10,25:35:96.91:3542,0,97	0/0:37,0:37:99:0,105,11045	0/0:22,0:22:63.22:0,63,7086	0/0:15,0:15:45.15:0,45,3809	0/0:23,0:23:66.23:0,66,5636	0/0:57,0:57:99:0,163,15891	0/0:15,0:15:45.14:0,45,2806	0/0:15,0:15:45.15:0,45,2954	0/0:36,0:36:99:0,102,11269	0/0:21,0:21:63.22:0,63,6497	0/0:30,0:30:87.30:0,87,8159	0/0:20,0:20:60.21:0,60,5586	0/0:7,0:7:21.07:0,21,2707
chr10	5084703	.	TA	T	2783.86	PASS	AB=0.920;AC=15;AF=0.268;AN=56;BaseQRankSum=9.295;DP=522;FS=2.862;HRun=10;HaplotypeScore=59.5168;InbreedingCoeff=0.8966;MQ=85.16;MQ0=0;MQRankSum=-1.361;QD=16.57;ReadPosRankSum=2.314;VQSLOD=4.2230;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,102,1076	0/0:7,0:7:12.03:0,12,133	0/1:21,2:23:16.49:16,0,243	0/0:21,0:20:15.47:0,15,242	0/0:18,1:19:16.02:0,16,392	0/0:24,0:24:62.53:0,63,671	0/0:24,0:24:66.18:0,66,730	0/0:25,0:25:60.15:0,60,657	0/0:14,0:14:42.11:0,42,465	0/0:23,0:23:51.14:0,51,564	0/0:7,0:7:18.05:0,18,199	0/0:11,0:11:27.06:0,27,292	0/0:8,0:8:21.04:0,21,223	0/0:12,0:12:33.09:0,33,365	1/1:0,16:16:44.99:391,45,0	0/0:19,1:20:28.08:0,28,529	1/1:2,24:26:68.98:599,69,0	1/1:4,13:17:35.99:313,36,0	0/0:26,0:26:66.16:0,66,717	0/0:13,0:13:36.09:0,36,391	0/0:13,0:13:39.11:0,39,431	0/0:15,1:16:16.05:0,16,389	0/0:17,0:18:44.95:0,45,471	0/0:14,0:14:35.97:0,36,398	1/1:3,16:20:47.02:397,47,0	1/1:7,25:32:44.79:618,45,0	1/1:2,14:16:35.99:312,36,0	1/1:4,14:18:38.99:338,39,0
chr10	5084753	.	G	GGT	490.05	PASS	AB=1.000;AC=22;AF=0.500;AN=44;BaseQRankSum=0.333;DP=501;FS=7.553;HRun=0;HaplotypeScore=95.0958;InbreedingCoeff=0.3892;MQ=65.22;MQ0=20;MQRankSum=0.641;QD=1.82;ReadPosRankSum=-1.537;VQSLOD=0.8598;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:40,0:40:14.71:165,15,0	0/0:7,0:9:8.66:0,9,49	./.	./.	0/0:13,0:13:3.01:0,3,31	0/1:22,0:22:18.02:19,0,18	0/1:21,0:22:2.48:2,0,9	./.	0/1:6,0:6:0:0,0,0	./.	0/0:12,0:12:2.84:0,3,14	0/1:17,0:17:0:0,0,0	0/0:5,0:6:2.80:0,3,13	./.	1/1:15,0:15:8.99:75,9,0	./.	0/0:20,0:22:5.68:0,6,28	1/1:21,0:21:15.79:114,16,0	1/1:22,0:18:0.47:1,0,0	0/0:10,0:11:5.85:0,6,45	0/1:26,0:25:0:0,0,0	0/0:15,0:15:3.48:0,3,32	1/1:8,2:10:3.01:43,3,0	1/1:18,3:21:3.01:43,3,0	1/1:10,0:11:14.97:138,15,0	1/1:21,0:20:2.92:17,3,0	0/1:12,0:13:1.66:2,0,9	0/0:11,0:12:5.68:0,6,28
chr10	5085863	.	TC	T	449.55	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.478;DP=618;FS=0.000;HRun=5;HaplotypeScore=63.6810;InbreedingCoeff=0.9954;MQ=76.37;MQ0=0;MQRankSum=-1.960;QD=26.44;ReadPosRankSum=1.212;VQSLOD=3.3346;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:87.25:0,87,1153	0/0:10,0:10:27.09:0,27,367	0/0:10,0:10:24.08:0,24,321	0/0:18,0:18:32.88:0,33,544	0/0:17,0:17:51.16:0,51,680	0/0:19,0:19:57.19:0,57,779	0/0:33,0:33:93.27:0,93,1236	0/0:34,0:34:81.27:0,81,1107	0/0:26,0:26:75.24:0,75,1007	0/0:17,0:17:48.16:0,48,654	0/0:14,0:14:39.13:0,39,533	0/0:41,0:41:99:0,114,1526	0/0:29,0:29:75.21:0,75,1004	0/0:22,0:22:66.21:0,66,886	0/0:25,0:25:75.24:0,75,1009	1/1:1,16:17:48.14:544,48,0	0/0:29,0:29:87.26:0,87,1166	0/0:28,0:28:78.26:0,78,1067	0/0:22,0:22:63.20:0,63,846	0/0:21,0:21:63.19:0,63,842	0/0:36,0:36:96.26:0,96,1248	0/0:23,0:23:63.19:0,63,842	0/0:13,0:13:30.10:0,30,405	0/0:21,0:21:63.18:0,63,826	0/0:12,0:12:33.11:0,33,451	0/0:19,0:19:57.17:0,57,763	0/0:18,0:18:54.17:0,54,722	0/0:10,0:10:30.10:0,30,410
chr10	5087037	.	ACTCGGGG	A	11716.39	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=15.624;DP=573;FS=34.681;HRun=0;HaplotypeScore=140.2438;InbreedingCoeff=0.9531;MQ=78.94;MQ0=0;MQRankSum=-17.717;QD=57.72;ReadPosRankSum=1.758;VQSLOD=3.1148;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,20:31:58.04:1354,58,0	0/0:8,0:8:24.08:0,24,952	0/0:20,0:20:57.19:0,57,2098	0/0:15,0:15:43.70:0,44,1456	0/0:15,0:15:42.13:0,42,1503	0/0:13,0:13:39.13:0,39,1487	0/0:29,0:29:84.25:0,84,3053	0/0:15,0:15:30.06:0,30,1200	0/0:22,0:22:63.22:0,63,2441	0/0:20,0:20:57.20:0,57,2208	0/0:12,0:12:36.11:0,36,1257	0/0:26,0:26:72.25:0,72,2651	0/0:30,0:30:87.30:0,87,3442	0/0:28,0:28:81.26:0,81,2974	1/1:1,35:36:93.32:2368,93,0	1/1:3,24:27:69.24:1768,69,0	1/1:5,17:22:39.09:934,39,0	1/1:3,18:21:33.11:856,33,0	0/0:19,0:19:42.14:0,42,1620	0/0:3,0:3:5.84:0,6,231	0/0:40,0:40:99:0,117,4429	0/0:7,0:7:16.30:0,16,483	0/0:11,0:11:27.09:0,27,1026	0/0:37,0:37:99:0,99,3514	1/1:1,17:18:51.18:1220,51,0	1/1:3,26:29:78.27:1992,78,0	1/1:2,15:17:45.15:1146,45,0	1/1:0,2:2:3.01:78,3,0
chr10	5088662	.	GCCCACC	G	4401.40	PASS	AB=1.000;AC=16;AF=0.308;AN=52;BaseQRankSum=2.934;DP=306;FS=8.084;HRun=0;HaplotypeScore=81.1819;InbreedingCoeff=0.7612;MQ=81.81;MQ0=0;MQRankSum=-6.805;QD=30.78;ReadPosRankSum=4.320;VQSLOD=3.4476;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:15:17.50:151,17,0	./.	0/0:10,0:9:18:0,18,166	0/0:16,0:15:25.68:0,26,442	0/0:7,0:7:11.99:0,12,157	0/0:9,0:9:20.96:0,21,326	0/0:9,0:9:26.05:0,26,348	0/0:15,0:15:30.06:0,30,383	0/0:9,0:9:20.94:0,21,453	0/0:5,0:5:12.02:0,12,113	0/0:1,0:1:2.99:0,3,24	0/0:15,0:15:33.08:0,33,781	0/0:8,0:10:24.08:0,24,463	0/0:13,0:13:24.05:0,24,462	1/1:1,18:19:33.11:772,33,0	0/1:12,0:12:41.84:42,0,215	0/1:18,0:18:58.58:59,0,291	1/1:1,14:17:33.07:686,33,0	0/0:14,0:14:34.80:0,35,499	./.	0/0:14,0:14:24.06:0,24,514	0/0:6,0:6:12.03:0,12,175	0/0:5,0:5:12.02:0,12,266	0/0:4,0:4:12.02:0,12,299	1/1:3,10:13:24.08:546,24,0	1/1:1,14:17:39.08:669,39,0	1/1:3,19:23:48.03:1042,48,0	1/1:4,4:9:27.05:435,27,0
chr10	5088663	.	CCCA	C	2675.26	PASS	AB=0.889;AC=19;AF=0.365;AN=52;BaseQRankSum=5.930;DP=301;FS=15.771;HRun=0;HaplotypeScore=69.8103;InbreedingCoeff=0.8208;MQ=81.95;MQ0=0;MQRankSum=-7.706;QD=17.84;ReadPosRankSum=4.532;VQSLOD=2.0714;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:14:29.29:244,29,0	./.	0/0:10,0:9:15.13:0,15,102	0/0:16,0:15:12.56:0,13,263	0/0:6,0:6:11.99:0,12,114	0/0:9,0:9:20.95:0,21,199	0/0:9,0:9:25.87:0,26,206	0/0:15,0:15:32.16:0,32,266	0/1:7,1:8:21.34:21,0,170	0/0:5,0:5:12.02:0,12,113	0/0:1,0:1:2.99:0,3,24	0/0:15,0:15:33.07:0,33,410	0/0:9,0:9:24.77:0,25,192	0/0:13,0:13:22.30:0,22,244	1/1:19,0:19:33.09:372,33,0	1/1:11,1:12:18.14:227,18,0	1/1:17,2:19:9.97:206,10,0	1/1:17,0:17:33.03:358,33,0	0/0:14,0:14:34.97:0,35,308	./.	0/0:13,0:13:23.91:0,24,246	0/0:6,0:6:1.40:0,1,44	0/0:5,0:5:12.01:0,12,142	0/0:4,0:4:12.02:0,12,171	1/1:12,0:12:24.05:257,24,0	1/1:17,0:17:39.05:391,39,0	1/1:23,0:23:48.10:527,48,0	1/1:9,0:9:27.04:271,27,0
chr10	5088665	.	CA	C	2262.53	PASS	AB=0.880;AC=22;AF=0.423;AN=52;BaseQRankSum=5.706;DP=295;FS=17.437;HRun=1;HaplotypeScore=61.3109;InbreedingCoeff=0.6427;MQ=79.67;MQ0=0;MQRankSum=-4.286;QD=12.30;ReadPosRankSum=5.532;VQSLOD=0.5005;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:14:29.53:233,30,0	./.	0/0:9,0:8:12.07:0,12,102	0/0:16,0:14:12.39:0,12,195	0/0:6,0:6:11.86:0,12,87	0/0:8,0:8:16.46:0,16,117	0/0:9,0:9:25.86:0,26,185	0/1:12,3:15:6.06:6,0,197	0/1:7,2:9:43.95:44,0,44	0/0:5,0:5:12.01:0,12,112	0/0:1,0:1:2.99:0,3,24	0/0:15,0:15:24.63:0,25,153	0/1:9,0:9:2.35:2,0,59	0/0:13,0:13:5.66:0,6,141	1/1:18,1:19:32.82:243,33,0	1/1:11,1:12:35.90:295,36,0	1/1:17,2:19:43.93:351,44,0	1/1:16,0:16:32.79:241,33,0	0/0:14,0:14:24.07:0,24,205	./.	0/1:11,2:13:3.18:3,0,108	0/0:6,0:6:1.35:0,1,43	0/0:5,0:5:7.62:0,8,63	0/0:4,0:4:11.74:0,12,94	1/1:10,0:10:23.83:171,24,0	1/1:16,0:16:38.84:300,39,0	1/1:20,3:23:47.73:353,48,0	1/1:9,0:9:26.91:212,27,0
chr10	5090033	.	CTG	C	77.60	PASS	AB=0.975;AC=11;AF=0.212;AN=52;BaseQRankSum=3.034;DP=682;FS=10.290;HRun=0;HaplotypeScore=90.3955;InbreedingCoeff=0.4167;MQ=67.08;MQ0=9;MQRankSum=0.128;QD=0.56;ReadPosRankSum=-0.754;VQSLOD=0.9447;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:25:2.53:0,3,22	0/0:6,0:6:5.94:0,6,41	./.	./.	0/0:20,0:20:21:0,21,229	0/0:21,0:21:17.76:0,18,192	0/0:30,0:30:2.09:0,2,121	0/0:22,0:22:3.86:0,4,23	0/0:24,0:24:14.99:0,15,175	0/0:17,0:17:10.09:0,10,70	0/1:12,0:12:2.91:3,0,80	0/1:34,3:37:28.95:29,0,234	0/1:27,0:26:24.74:25,0,187	1/1:15,6:21:6.01:65,6,0	0/0:25,0:24:12:0,12,115	0/0:33,0:33:21.02:0,21,244	0/0:37,0:37:14.84:0,15,116	0/0:28,0:27:12.36:0,12,100	0/0:20,0:19:5.93:0,6,61	0/0:23,0:23:23.82:0,24,258	0/0:65,0:65:21.92:0,22,175	0/0:17,0:17:8.97:0,9,92	0/0:12,0:12:15.02:0,15,177	0/0:26,0:26:20.96:0,21,215	0/0:27,0:26:15.02:0,15,174	1/1:17,0:18:5.60:27,6,0	1/1:15,0:17:5.68:28,6,0	1/1:4,0:7:8.52:42,9,0
chr10	5090083	.	TCATCCATCCATC	T	3155.77	PASS	AB=0.604;AC=16;AF=0.286;AN=56;BaseQRankSum=11.639;DP=580;FS=2.476;HRun=0;HaplotypeScore=173.0254;InbreedingCoeff=0.7951;MQ=50.66;MQ0=17;MQRankSum=-11.119;QD=19.24;ReadPosRankSum=-2.235;VQSLOD=2.4974;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:7,18:25:15.28:112,15,0	0/0:5,0:5:11.89:0,12,706	0/0:37,0:12:36.04:0,36,1669	0/0:48,0:18:39.86:0,40,1947	0/0:18,0:18:39.12:0,39,2112	0/0:15,0:15:42.13:0,42,2249	0/0:27,0:27:65.57:0,66,3575	0/0:35,0:34:75.25:0,75,3629	0/0:17,0:17:42.14:0,42,2413	0/0:19,0:19:48.16:0,48,2492	0/0:14,0:14:26.92:0,27,1589	0/0:35,0:34:78.26:0,78,4267	0/0:18,0:18:48.16:0,48,2598	0/0:20,0:19:48.15:0,48,2462	1/1:3,13:16:14.77:95,15,0	1/1:8,15:23:20.41:302,20,0	0/1:10,15:24:52.07:371,0,52	1/1:5,6:11:9.50:318,10,0	0/0:14,0:12:24.07:0,24,868	0/0:13,0:13:36.12:0,36,2079	0/0:37,0:37:80.55:0,81,4352	0/0:17,0:17:45.10:0,45,2265	0/0:16,0:16:45.15:0,45,2479	0/0:11,0:11:23.93:0,24,1278	1/1:9,11:20:14.25:179,14,0	0/1:6,15:21:13.04:997,0,13	1/1:5,13:18:35.83:746,36,0	1/1:2,3:5:9.86:232,10,0
chr10	5090544	.	T	TA	4166.32	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-8.197;DP=492;FS=3.416;HRun=8;HaplotypeScore=49.8765;InbreedingCoeff=0.9566;MQ=71.75;MQ0=0;MQRankSum=0.146;QD=23.67;ReadPosRankSum=3.339;VQSLOD=4.3301;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,0:25:59.76:304,60,0	0/0:6,0:6:15:0,15,134	0/0:8,0:5:1.04:0,1,22	0/0:16,0:13:14.02:0,14,78	0/0:24,0:24:71.98:0,72,637	0/0:26,0:26:68.97:0,69,613	0/0:14,0:14:32.98:0,33,292	0/0:36,0:36:90:0,90,803	0/0:10,0:10:30.01:0,30,270	0/0:16,0:16:36.01:0,36,326	0/0:22,0:22:63:0,63,562	0/0:17,0:17:42:0,42,376	0/0:10,0:10:27.01:0,27,247	0/0:20,0:20:50.97:0,51,450	1/1:5,15:20:36.10:412,36,0	1/1:2,12:14:36.10:413,36,0	1/1:3,17:20:48.14:550,48,0	1/1:4,17:21:48.14:549,48,0	0/0:24,0:24:56.90:0,57,501	0/0:19,0:19:41.98:0,42,375	0/0:6,0:6:18.01:0,18,164	0/0:12,0:12:27.01:0,27,244	0/0:14,0:14:33:0,33,301	0/0:16,0:16:44.94:0,45,389	1/1:0,18:18:45.13:516,45,0	1/1:3,19:22:54.04:580,54,0	1/1:5,20:26:53.85:601,54,0	1/1:0,10:10:21.06:241,21,0
chr10	5090815	.	AAC	A	289.29	PASS	AB=0.979;AC=15;AF=0.326;AN=46;BaseQRankSum=-0.255;DP=584;FS=7.421;HRun=0;HaplotypeScore=80.3626;InbreedingCoeff=-0.3788;MQ=67.77;MQ0=14;MQRankSum=0.046;QD=1.01;ReadPosRankSum=1.953;VQSLOD=0.2121;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/0:6,0:6:6.49:0,6,88	./.	./.	0/0:9,0:9:4.26:0,4,44	0/0:15,0:15:2.92:0,3,17	0/1:18,1:19:45.83:46,0,139	./.	0/1:19,0:19:18.87:19,0,36	0/1:25,0:25:10.92:11,0,229	0/1:11,1:12:20.54:55,0,21	0/1:26,0:27:6.83:7,0,183	0/0:20,0:20:12.04:0,12,174	0/0:21,0:23:2.85:0,3,142	0/1:21,0:21:21.74:40,0,22	0/0:23,0:24:17.86:0,18,99	0/1:24,0:24:4.04:4,0,173	0/1:17,0:16:43.65:44,0,98	1/1:16,0:15:2.99:24,3,0	0/1:8,0:8:13.81:26,0,14	0/1:48,1:50:56.39:56,0,390	0/0:11,0:10:3.01:0,3,44	./.	0/1:24,2:25:64.95:65,0,194	0/1:8,0:8:11.06:11,0,136	0/0:24,0:24:26.05:0,26,281	0/1:14,0:13:14.26:14,0,54	0/0:9,0:8:9.02:0,9,101
chr10	5090864	.	A	ACC	2837.47	PASS	AB=1.000;AC=18;AF=0.321;AN=56;BaseQRankSum=1.950;DP=633;FS=2.195;HRun=2;HaplotypeScore=101.9591;InbreedingCoeff=0.8226;MQ=56.19;MQ0=14;MQRankSum=0.432;QD=13.58;ReadPosRankSum=0.073;VQSLOD=0.7631;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:31,0:30:64.41:512,64,0	0/0:7,0:7:14.57:0,15,138	0/0:16,0:3:5.84:0,6,38	0/0:15,0:6:11.73:0,12,86	0/0:14,0:14:23.87:0,24,193	0/0:14,0:14:29.59:0,30,246	0/0:41,0:41:75.13:0,75,786	0/0:23,0:22:62.98:0,63,555	0/0:18,0:18:32.41:0,32,263	0/0:26,0:26:70.73:0,71,657	0/0:17,0:17:35.73:0,36,282	0/0:35,0:34:80.56:0,81,650	0/0:22,0:23:65.86:0,66,583	0/1:19,0:19:8.30:8,0,257	1/1:18,0:18:40.50:359,40,0	1/1:16,0:16:21.79:216,22,0	1/1:38,0:38:51.89:599,52,0	1/1:23,0:23:40:438,40,0	0/0:22,0:18:44.84:0,45,367	0/0:12,0:12:26.44:0,26,203	0/0:80,0:77:99:0,176,1503	0/0:13,0:12:23.90:0,24,205	0/0:5,0:5:11.97:0,12,96	0/0:42,0:42:96.98:0,97,839	1/1:21,0:21:33.97:323,34,0	1/1:28,0:28:32.97:476,33,0	0/1:3,0:3:0.59:43,0,1	1/1:4,8:10:1.81:63,2,0
chr10	5091196	.	GGGAGAC	G	1003.88	PASS	AB=0.625;AC=17;AF=0.304;AN=56;BaseQRankSum=11.048;DP=407;FS=27.115;HRun=0;HaplotypeScore=75.4994;InbreedingCoeff=0.7472;MQ=44.90;MQ0=44;MQRankSum=-8.519;QD=10.14;ReadPosRankSum=0.870;VQSLOD=0.5462;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:10:26.67:181,27,0	0/0:4,0:4:11.50:0,12,134	0/0:22,0:4:4.22:0,4,59	0/0:16,0:1:2.99:0,3,23	0/0:11,0:9:11.98:0,12,163	0/0:11,0:10:14.86:0,15,216	0/0:32,0:24:51.97:0,52,859	0/0:20,0:17:41.24:0,41,564	0/0:10,0:9:23.95:0,24,459	0/0:16,0:15:38.45:0,38,604	0/0:9,0:7:11.92:0,12,133	0/0:16,0:16:32.78:0,33,472	0/0:13,0:12:27.05:0,27,499	0/0:7,0:7:15.02:0,15,210	1/1:13,0:12:35.32:222,35,0	1/1:7,0:7:20.77:147,21,0	1/1:16,0:17:3.80:88,4,0	1/1:8,0:7:0.91:68,1,0	0/0:27,0:9:26.77:0,27,376	0/0:6,0:4:12:0,12,239	0/0:42,0:33:68.42:0,68,1224	0/0:12,0:8:20.99:0,21,359	0/0:7,0:4:5.97:0,6,64	0/0:27,0:25:65.76:0,66,1288	1/1:4,0:4:11.78:73,12,0	0/1:8,12:18:72.42:172,0,72	1/1:9,0:8:20.80:150,21,0	1/1:5,0:5:11.92:94,12,0
chr10	5091655	.	CGAGAGAGAGA	C	248.39	PASS	AB=0.965;AC=11;AF=0.262;AN=42;BaseQRankSum=3.790;DP=371;FS=46.268;HRun=0;HaplotypeScore=98.9916;InbreedingCoeff=0.2048;MQ=69.62;MQ0=11;MQRankSum=-1.069;QD=1.90;ReadPosRankSum=-0.713;VQSLOD=-0.1272;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:25:5.99:49,6,0	./.	./.	0/1:36,0:18:0:1,0,0	./.	1/1:9,2:11:5.20:168,5,0	0/0:15,0:15:5.21:0,5,139	0/0:24,0:24:3.01:0,3,54	0/0:6,0:7:6.02:0,6,101	0/0:7,0:7:3.01:0,3,59	0/0:6,0:7:3.01:0,3,48	0/1:15,4:19:0:0,0,0	./.	1/1:8,0:8:3:25,3,0	./.	0/1:11,0:11:41.90:60,0,42	0/0:23,0:22:12.04:0,12,272	0/1:13,0:10:37.59:38,0,42	0/0:8,0:8:6.02:0,6,97	0/0:9,0:9:6.02:0,6,85	0/0:19,0:17:15.05:0,15,410	0/0:10,0:10:6.02:0,6,96	0/0:8,3:11:0.47:0,0,1	./.	0/0:8,0:8:3.01:0,3,70	0/0:13,0:12:7.58:0,8,133	0/1:8,0:8:23.58:24,0,64	./.
chr10	5091701	.	AGAGAGAGAGAG	A	387.77	PASS	AB=0.938;AC=11;AF=0.204;AN=54;BaseQRankSum=5.024;DP=361;FS=4.097;HRun=0;HaplotypeScore=69.2849;InbreedingCoeff=0.2031;MQ=41.30;MQ0=50;MQRankSum=-1.950;QD=4.26;ReadPosRankSum=0.259;VQSLOD=1.4147;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:16:11.67:198,12,0	./.	0/0:34,0:10:21.67:0,22,350	0/0:37,0:15:37.21:0,37,411	0/0:16,0:15:24.08:0,24,318	0/1:9,0:9:61.36:61,0,141	0/0:19,0:17:21.16:0,21,457	0/0:14,0:14:21.91:0,22,261	0/0:10,0:7:11.46:0,11,280	0/0:3,0:3:9.03:0,9,177	0/0:11,0:11:27.08:0,27,403	0/0:8,0:8:8.78:0,9,120	0/0:6,0:4:3.48:0,3,41	0/0:4,0:4:5.71:0,6,79	1/1:5,0:2:1.72:4,2,0	0/1:5,4:8:32.47:99,0,32	0/0:18,0:9:12.04:0,12,204	0/1:16,0:10:16.20:42,0,16	0/0:11,0:8:21.04:0,21,294	0/0:8,0:8:12.92:0,13,159	0/0:24,0:20:30.10:0,30,594	0/0:8,0:8:14.90:0,15,199	0/0:12,0:11:12.51:0,13,189	0/0:17,0:16:10.41:0,10,209	0/0:8,0:3:3.01:0,3,48	0/1:13,0:7:24.73:25,0,122	0/1:9,0:5:41.86:61,0,42	1/1:3,0:2:3.01:38,3,0
chr10	5091703	.	AGAGAGAGAG	A	429.90	PASS	AB=1.000;AC=15;AF=0.278;AN=54;BaseQRankSum=5.603;DP=357;FS=0.000;HRun=0;HaplotypeScore=60.9497;InbreedingCoeff=0.2839;MQ=43.05;MQ0=50;MQRankSum=-2.470;QD=3.50;ReadPosRankSum=-0.941;VQSLOD=1.3492;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:14:11.55:134,12,0	./.	0/0:37,0:10:22.31:0,22,351	0/0:40,0:16:36.35:0,36,410	0/0:17,0:16:27.09:0,27,358	0/1:9,0:9:64.34:64,0,178	0/1:20,0:18:36.75:37,0,370	0/0:14,0:14:20.94:0,21,227	0/0:10,0:7:11.44:0,11,199	0/0:3,0:3:8.99:0,9,123	0/0:11,0:11:24.08:0,24,342	0/0:7,0:7:8.95:0,9,119	0/0:5,0:3:3.48:0,3,40	0/0:3,0:3:6.02:0,6,80	1/1:5,0:2:1.72:4,2,0	1/1:9,0:8:2.14:72,2,0	0/0:17,0:8:12:0,12,151	1/1:9,7:10:5.69:129,6,0	0/0:11,0:8:20.74:0,21,258	0/0:7,0:7:9.92:0,10,121	0/0:24,0:20:30.10:0,30,491	0/0:8,0:8:9.03:0,9,120	0/0:11,0:10:12.04:0,12,165	0/1:15,0:14:7.87:8,0,198	0/0:8,0:3:3.48:0,3,37	0/1:14,0:8:41.22:66,0,41	0/1:8,0:4:29.52:30,0,31	1/1:2,0:1:3.01:38,3,0
chr10	5091711	.	AG	A	258.61	PASS	AB=0.636;AC=12;AF=0.222;AN=54;BaseQRankSum=4.445;DP=352;FS=6.707;HRun=2;HaplotypeScore=39.4651;InbreedingCoeff=0.6441;MQ=52.77;MQ0=49;MQRankSum=-1.735;QD=3.45;ReadPosRankSum=-0.140;VQSLOD=-0.1559;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:11,12:12:5.86:73,6,0	0/0:2,0:2:3.01:0,3,40	0/0:43,0:14:35.98:0,36,450	0/0:50,0:23:42.14:0,42,557	0/0:17,0:16:27.09:0,27,358	0/0:11,0:11:26.57:0,27,304	0/0:15,0:13:28.31:0,28,361	0/0:15,0:15:20.19:0,20,245	0/0:10,0:8:18.21:0,18,182	0/0:3,0:3:9.03:0,9,119	0/0:11,0:11:27.08:0,27,343	0/0:7,0:7:9.03:0,9,119	0/0:5,0:3:3.01:0,3,40	0/0:4,0:4:9.03:0,9,119	0/0:2,3:2:0:0,0,0	1/1:7,0:6:2.33:17,2,0	./.	1/1:13,1:8:5.95:54,6,0	0/0:12,0:9:23.67:0,24,289	0/0:6,0:6:11.72:0,12,158	0/0:20,0:17:27.06:0,27,341	0/0:6,0:6:8.79:0,9,119	0/0:10,0:9:12.04:0,12,160	0/0:11,0:10:20.99:0,21,240	0/1:2,6:3:0:0,0,0	1/1:5,8:7:11.68:150,12,0	0/1:4,3:3:2.19:32,0,2	1/1:0,3:2:6.02:75,6,0
chr10	5091851	.	C	CTCCT	7607.83	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-3.853;DP=576;FS=0.912;HRun=0;HaplotypeScore=93.6356;InbreedingCoeff=0.9810;MQ=74.72;MQ0=2;MQRankSum=-1.586;QD=43.98;ReadPosRankSum=1.475;VQSLOD=5.4170;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,28:38:66.23:1629,66,0	0/0:9,0:9:24.08:0,24,409	0/0:23,0:18:21:0,21,303	0/0:29,0:23:29.99:0,30,397	0/0:16,0:16:39.12:0,39,628	0/0:21,0:21:45.11:0,45,675	0/0:21,0:21:33.08:0,33,506	0/0:29,0:29:42.05:0,42,591	0/0:17,0:17:45.09:0,45,727	0/0:21,0:21:60.19:0,60,977	0/0:15,0:15:42.10:0,42,656	0/0:20,0:20:51.14:0,51,839	0/0:14,0:14:36.11:0,36,587	0/0:21,0:21:51.15:0,51,816	1/1:3,21:24:48.16:1202,48,0	1/1:3,16:19:36.12:901,36,0	1/1:2,11:14:27.09:677,27,0	1/1:1,9:11:27.09:635,27,0	0/0:15,0:15:36.11:0,36,579	0/0:22,0:22:57.18:0,57,943	0/0:40,0:40:90.24:0,90,1417	0/0:18,0:18:36.10:0,36,564	0/0:20,0:20:54.18:0,54,888	0/0:32,0:32:78.25:0,78,1280	1/1:6,11:18:21.07:525,21,0	1/1:5,22:27:60.04:1290,60,0	1/1:1,11:14:24.08:598,24,0	1/1:2,4:7:6.02:150,6,0
chr10	5093335	.	A	ATTT	4100.70	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-0.689;DP=416;FS=21.954;HRun=10;HaplotypeScore=68.5543;InbreedingCoeff=0.9209;MQ=72.12;MQ0=0;MQRankSum=-3.278;QD=28.09;ReadPosRankSum=-0.753;VQSLOD=0.5474;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,0:41:79.40:595,79,0	0/0:1,0:1:3.01:0,3,36	0/0:13,0:12:21:0,21,226	0/0:10,0:9:9.85:0,10,100	0/0:4,0:6:17.92:0,18,182	0/0:22,0:22:60.16:0,60,730	0/0:21,0:21:57.15:0,57,692	0/0:21,0:23:41.95:0,42,492	0/0:12,0:12:27.03:0,27,327	0/0:5,0:5:8.99:0,9,109	0/0:4,0:4:12.04:0,12,146	0/0:18,0:18:42.10:0,42,511	0/0:22,0:23:60.08:0,60,709	0/0:13,0:13:35.89:0,36,415	1/1:2,8:10:18.06:346,18,0	1/1:2,0:5:5.98:46,6,0	1/1:8,16:24:57.07:938,57,0	1/1:2,18:22:47.15:820,47,0	0/0:25,0:25:60.11:0,60,712	0/0:11,0:12:29.99:0,30,346	0/0:24,0:24:60.15:0,60,726	0/0:7,0:8:20.98:0,21,237	0/0:9,0:9:24.06:0,24,292	0/0:21,0:21:54.08:0,54,656	1/1:1,3:4:8.99:135,9,0	1/1:4,8:15:33.03:495,33,0	1/1:3,7:12:23.95:316,24,0	1/1:3,8:12:24.08:410,24,0
chr10	5093547	.	A	AT	1360.58	PASS	AB=0.692;AC=15;AF=0.326;AN=46;BaseQRankSum=8.162;DP=187;FS=6.348;HRun=2;HaplotypeScore=38.3525;InbreedingCoeff=0.6474;MQ=50.04;MQ0=2;MQRankSum=-7.044;QD=14.47;ReadPosRankSum=2.064;VQSLOD=2.9749;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:5,4:9:51.74:147,0,52	0/0:1,0:1:3.01:0,3,37	./.	0/0:1,0:1:3.01:0,3,37	0/0:4,0:4:9.03:0,9,111	0/0:10,0:10:30.09:0,30,372	0/0:3,0:3:9.03:0,9,111	0/0:33,0:33:95.33:0,95,1088	./.	0/0:6,0:6:15.04:0,15,176	0/0:2,0:2:6.02:0,6,74	0/0:1,0:1:3.01:0,3,37	0/0:7,0:7:21.07:0,21,260	0/0:2,0:2:3.01:0,3,37	./.	1/1:0,1:1:3.01:43,3,0	1/1:10,6:16:32.24:336,32,0	1/1:15,5:20:25.56:281,26,0	0/0:7,0:6:18.06:0,18,222	./.	0/0:3,0:3:9.03:0,9,111	./.	0/0:2,0:1:3.01:0,3,37	0/0:7,0:7:21.07:0,21,260	1/1:4,4:8:15.29:137,15,0	1/1:7,1:8:18.78:186,19,0	1/1:4,1:5:8.86:93,9,0	1/1:23,4:27:29.79:304,30,0
chr10	5093548	.	TTA	T	1309.28	PASS	AB=1.000;AC=15;AF=0.313;AN=48;BaseQRankSum=7.350;DP=181;FS=5.205;HRun=0;HaplotypeScore=39.9531;InbreedingCoeff=0.6399;MQ=49.92;MQ0=2;MQRankSum=-5.577;QD=14.55;ReadPosRankSum=1.034;VQSLOD=2.4706;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:9,0:9:28.13:136,0,28	0/0:1,0:1:3.01:0,3,58	0/0:4,0:2:3.01:0,3,37	0/0:1,0:1:3.01:0,3,37	0/0:3,0:3:9.03:0,9,151	0/0:10,0:10:30.10:0,30,538	0/0:3,0:3:9.03:0,9,132	0/0:33,0:33:98.53:0,99,1481	./.	0/0:5,0:5:15.05:0,15,227	0/0:2,0:2:6.02:0,6,74	0/0:1,0:1:3.01:0,3,58	0/0:7,0:7:21.07:0,21,364	0/0:2,0:2:6.02:0,6,76	./.	1/1:1,0:1:2.50:9,2,0	1/1:8,8:16:28.52:332,29,0	1/1:10,9:19:33.48:286,33,0	0/0:7,0:6:18.06:0,18,285	./.	0/0:3,0:3:9.03:0,9,132	./.	0/0:2,0:1:3.01:0,3,58	0/0:7,0:7:21.07:0,21,361	1/1:7,0:7:11.34:73,11,0	1/1:4,4:8:21.69:212,22,0	1/1:4,1:5:11.69:112,12,0	1/1:9,16:25:28.17:317,28,0
chr10	5093550	.	A	AT	1031.44	PASS	AC=14;AF=0.292;AN=48;BaseQRankSum=8.535;DP=177;FS=6.765;HRun=2;HaplotypeScore=37.2993;InbreedingCoeff=0.6390;MQ=49.91;MQ0=2;MQRankSum=-7.826;QD=13.22;ReadPosRankSum=2.932;VQSLOD=2.4447;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:0.71:0,1,36	0/0:1,0:1:3.01:0,3,37	0/0:4,0:2:3.01:0,3,37	0/0:1,0:1:3.01:0,3,35	0/0:3,0:3:9.03:0,9,111	0/0:10,0:10:30.09:0,30,371	0/0:3,0:3:9.03:0,9,111	0/0:32,0:32:90.10:0,90,1044	./.	0/0:5,0:5:15.05:0,15,186	0/0:2,0:2:6.02:0,6,74	0/0:1,0:1:3.01:0,3,37	0/0:7,0:7:21.05:0,21,248	0/0:2,0:2:3.01:0,3,37	./.	1/1:1,0:1:1.82:5,2,0	1/1:12,1:15:33.16:295,33,0	1/1:16,3:19:11.05:206,11,0	0/0:7,0:6:18.05:0,18,211	./.	0/0:3,0:3:9.03:0,9,111	./.	0/0:2,0:1:3.01:0,3,37	0/0:7,0:7:21.07:0,21,260	1/1:2,3:6:9.79:162,10,0	1/1:6,3:9:13.27:176,13,0	1/1:3,1:4:11.23:110,11,0	1/1:19,4:24:6.83:235,7,0
chr10	5093556	.	A	AT	486.16	PASS	AB=0.868;AC=9;AF=0.180;AN=50;BaseQRankSum=5.569;DP=171;FS=0.837;HRun=2;HaplotypeScore=36.1319;InbreedingCoeff=-0.1615;MQ=49.76;MQ0=2;MQRankSum=-4.474;QD=5.52;ReadPosRankSum=-0.360;VQSLOD=0.4146;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:7,2:9:63.44:63,0,120	0/0:1,0:1:3.01:0,3,37	0/0:3,0:2:3.01:0,3,37	./.	0/0:4,0:4:12.04:0,12,148	0/0:8,0:8:24.08:0,24,298	0/0:3,0:3:9.03:0,9,111	0/0:28,0:28:78.06:0,78,886	0/0:2,0:2:6.01:0,6,62	0/0:4,0:4:12.04:0,12,148	0/0:1,0:1:3.01:0,3,37	0/0:1,0:1:3.01:0,3,37	0/0:6,0:6:18.06:0,18,223	0/0:2,0:2:3.01:0,3,37	./.	1/1:1,0:1:2.60:10,3,0	0/1:15,0:15:81.78:82,0,94	0/1:14,5:18:99:165,0,159	0/0:5,0:4:12.04:0,12,148	0/0:2,0:2:3.01:0,3,37	0/0:3,0:3:9.03:0,9,111	./.	0/0:2,0:1:3.01:0,3,37	0/0:7,0:7:21.07:0,21,260	0/1:6,1:7:36.08:36,0,76	0/1:9,1:10:24.08:24,0,153	0/1:3,1:4:53.61:70,0,54	0/1:20,3:23:99:160,0,133
chr10	5095777	.	TG	T	1989.46	PASS	AB=0.857;AC=22;AF=0.393;AN=56;BaseQRankSum=7.639;DP=438;FS=92.606;HRun=2;HaplotypeScore=50.1204;InbreedingCoeff=0.5425;MQ=52.55;MQ0=25;MQRankSum=-5.838;QD=9.47;ReadPosRankSum=-3.127;VQSLOD=-0.5716;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:13,2:25:61.08:431,61,0	0/0:6,0:6:11.79:0,12,113	0/0:33,0:8:11.76:0,12,146	0/1:35,0:8:11.57:12,0,92	0/0:24,0:23:5.31:0,5,403	0/1:13,0:14:3.86:4,0,216	0/0:12,0:9:1.26:0,1,198	0/0:22,0:20:26.45:0,26,450	0/0:10,0:10:4.63:0,5,227	0/0:14,0:14:28.64:0,29,367	0/0:17,0:16:30.37:0,30,326	0/0:11,0:11:8.17:0,8,108	0/0:9,0:14:14.58:0,15,265	0/0:6,0:9:2.58:0,3,124	1/1:2,0:11:14.16:76,14,0	1/1:1,6:8:11.99:124,12,0	1/1:15,5:23:2.22:331,2,0	1/1:1,8:9:15.05:185,15,0	0/0:11,0:10:10.05:0,10,236	0/0:17,1:17:9.21:0,9,295	1/1:5,0:5:3.37:17,3,0	0/0:11,0:11:28.82:0,29,380	0/1:10,0:11:12.47:12,0,174	0/0:11,0:10:16.96:0,17,200	1/1:1,9:18:29.94:344,30,0	1/1:2,11:12:35.25:352,35,0	1/1:4,4:20:23.44:217,23,0	0/1:3,5:10:15.76:75,0,16
chr10	5095779	.	GTTCTTTT	G	200.38	PASS	AB=0.976;AC=12;AF=0.214;AN=56;BaseQRankSum=4.869;DP=451;FS=59.693;HRun=0;HaplotypeScore=93.0962;InbreedingCoeff=-0.0307;MQ=51.25;MQ0=28;MQRankSum=-4.476;QD=1.34;ReadPosRankSum=-0.505;VQSLOD=-0.7399;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:28:1.98:0,2,427	0/0:6,0:6:4.98:0,5,233	0/0:33,0:8:7.66:0,8,213	0/0:34,0:8:16.77:0,17,218	0/0:24,0:23:40.46:0,40,667	0/0:10,0:13:21.69:0,22,408	0/0:12,0:9:26.57:0,27,385	0/0:24,0:22:27.42:0,27,428	0/0:13,0:10:19.79:0,20,333	0/1:9,4:13:31.48:31,0,398	0/0:18,0:17:16.46:0,16,566	0/0:10,0:10:11.92:0,12,160	0/0:15,0:15:28.92:0,29,662	0/1:7,0:7:0.89:1,0,186	1/1:10,0:10:14.79:123,15,0	0/1:9,0:8:7.97:8,0,43	0/1:27,0:25:11.54:12,0,573	0/1:14,0:12:13.68:14,0,20	0/0:12,0:11:27.48:0,27,426	0/0:19,0:17:20.31:0,20,466	0/1:5,0:5:6.73:7,0,91	0/0:11,0:11:20.10:0,20,393	0/0:12,0:12:10.06:0,10,420	0/0:14,0:11:25.86:0,26,523	0/1:19,0:18:24.39:24,0,42	0/1:16,0:15:13.66:14,0,38	0/1:19,0:18:5.31:83,0,5	0/1:11,0:10:28.56:29,0,52
chr10	5095895	.	C	CT	1588.72	PASS	AB=0.874;AC=15;AF=0.268;AN=56;BaseQRankSum=-4.196;DP=405;FS=4.876;HRun=11;HaplotypeScore=47.1480;InbreedingCoeff=0.6214;MQ=71.33;MQ0=2;MQRankSum=0.380;QD=10.88;ReadPosRankSum=1.113;VQSLOD=2.5717;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:80.59:0,81,615	0/0:5,0:5:14.94:0,15,116	0/1:17,0:11:11.79:12,0,34	0/1:19,0:16:25.53:26,0,69	0/0:11,0:12:28.89:0,29,212	0/0:14,0:16:37.87:0,38,284	0/0:11,0:12:25.92:0,26,192	0/0:22,0:23:53.27:0,53,402	0/0:7,0:6:17.93:0,18,139	0/0:14,0:15:22.93:0,23,168	0/0:10,0:12:25.20:0,25,188	0/0:10,0:10:23.90:0,24,186	0/0:14,0:14:8:0,8,147	0/0:13,0:13:20.83:0,21,158	1/1:1,4:5:3.01:30,3,0	0/0:10,0:10:26.86:0,27,206	0/1:8,12:21:18.71:316,0,19	1/1:3,20:23:1.20:354,1,0	0/0:8,0:9:13.96:0,14,97	0/0:12,0:12:23.86:0,24,186	0/0:19,0:19:41.78:0,42,322	0/0:8,0:8:16.94:0,17,120	0/0:15,0:15:23.80:0,24,178	0/0:16,0:16:47.59:0,48,357	1/1:0,11:12:23.88:227,24,0	1/1:8,13:21:15.82:335,16,0	1/1:4,15:21:38.58:347,39,0	1/1:1,4:5:12.49:119,12,0
chr10	5096489	.	AC	A	1282.11	PASS	AB=0.835;AC=20;AF=0.357;AN=56;BaseQRankSum=3.198;DP=243;FS=2.452;HRun=8;HaplotypeScore=34.7026;InbreedingCoeff=0.6240;MQ=85.53;MQ0=4;MQRankSum=0.802;QD=9.57;ReadPosRankSum=1.582;VQSLOD=0.5020;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,9:15:27.03:259,27,0	0/0:3,0:3:9.02:0,9,101	0/1:19,1:11:18.93:19,0,83	0/1:28,1:18:3.69:4,0,18	0/0:6,0:6:9.02:0,9,97	0/0:7,0:7:15.03:0,15,170	0/0:12,0:12:18.06:0,18,217	0/0:5,0:5:9.02:0,9,99	0/0:3,0:3:6.01:0,6,63	0/0:7,0:7:15.05:0,15,181	0/0:8,0:8:18.05:0,18,216	0/0:11,0:11:24.06:0,24,278	0/0:4,0:4:6.02:0,6,72	0/0:7,0:7:12.51:0,13,144	1/1:2,9:11:24.04:231,24,0	1/1:2,3:5:9.01:87,9,0	1/1:2,8:10:18.03:174,18,0	1/1:1,8:9:17.98:164,18,0	0/0:10,0:10:21.04:0,21,232	0/0:9,0:9:14.90:0,15,148	0/0:8,0:8:21.06:0,21,254	0/0:6,0:6:9.02:0,9,97	0/0:3,0:3:9.02:0,9,97	0/1:7,1:8:4.95:5,0,202	1/1:0,6:6:18.03:174,18,0	0/1:2,7:9:12.23:171,0,12	1/1:4,3:7:11.95:105,12,0	1/1:1,3:4:9.01:86,9,0
chr10	5096553	.	CGT	C	235.96	PASS	AB=0.875;AC=12;AF=0.333;AN=36;BaseQRankSum=-0.030;DP=232;FS=0.000;HRun=0;HaplotypeScore=44.7983;InbreedingCoeff=0.3177;MQ=71.81;MQ0=10;MQRankSum=0.738;QD=3.81;ReadPosRankSum=1.405;VQSLOD=1.2957;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:9:2.32:0,2,43	./.	./.	./.	1/1:4,0:4:2.74:12,3,0	0/0:4,0:4:3.01:0,3,44	0/0:8,2:10:6.02:0,6,86	./.	0/0:6,0:6:6.02:0,6,88	0/1:8,4:12:30.12:72,0,30	./.	0/0:10,0:10:2.04:0,2,6	1/1:1,3:4:9.02:96,9,0	0/0:7,0:7:9.03:0,9,129	0/0:7,0:7:6.48:0,6,69	1/1:7,0:7:3.41:19,3,0	0/0:11,0:11:6.55:0,7,19	0/0:6,0:6:5.48:0,5,56	./.	1/1:2,0:2:1.25:3,1,0	0/1:23,0:22:48.03:48,0,201	./.	./.	1/1:9,1:10:11.44:105,11,0	0/0:10,0:9:11.60:0,12,77	0/0:8,0:8:2.97:0,3,20	./.	./.
chr10	5096603	.	CGT	C	407.29	PASS	AB=0.727;AC=11;AF=0.212;AN=52;BaseQRankSum=7.045;DP=283;FS=8.755;HRun=0;HaplotypeScore=48.1778;InbreedingCoeff=0.5009;MQ=54.81;MQ0=15;MQRankSum=0.342;QD=6.57;ReadPosRankSum=0.404;VQSLOD=1.5710;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:11,3:15:6.08:31,6,0	0/0:2,0:1:3:0,3,25	0/0:7,0:1:2.68:0,3,11	./.	0/0:7,0:7:1.43:0,1,219	0/0:14,0:14:27.07:0,27,397	0/0:19,0:19:45.15:0,45,695	0/0:11,0:9:24.08:0,24,398	0/0:11,0:11:33.08:0,33,508	0/0:11,0:10:0.04:0,0,170	0/0:4,0:3:3.01:0,3,49	0/0:7,0:7:12.01:0,12,126	0/0:7,0:7:14.93:0,15,167	0/0:10,0:10:23.27:0,23,299	0/0:5,1:6:1.25:0,1,61	1/1:9,0:9:2.98:22,3,0	1/1:2,18:20:24.34:309,24,0	0/1:5,3:8:24.29:24,0,47	0/0:7,0:7:20.99:0,21,275	0/0:5,0:4:9.03:0,9,139	0/0:39,0:37:54.45:0,54,1137	0/0:6,0:5:12.04:0,12,195	0/0:5,0:5:12.04:0,12,195	0/0:20,0:19:33.88:0,34,482	0/0:13,0:13:5.92:0,6,42	1/1:2,3:5:14.99:158,15,0	./.	1/1:3,2:4:1.36:4,1,0
chr10	5097808	.	TGG	T	3097.29	PASS	AB=0.625;AC=17;AF=0.327;AN=52;BaseQRankSum=0.217;DP=210;FS=2.168;HRun=7;HaplotypeScore=29.2022;InbreedingCoeff=0.7031;MQ=78.68;MQ0=2;MQRankSum=-0.368;QD=24.20;ReadPosRankSum=4.885;VQSLOD=0.9333;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,20:22:48.15:607,48,0	0/0:3,0:3:6.02:0,6,78	0/0:6,0:5:10.49:0,10,73	0/0:17,0:15:29.23:0,29,450	0/0:9,0:9:24.07:0,24,387	0/0:4,0:4:11.98:0,12,150	0/0:3,0:4:5.98:0,6,59	0/0:4,0:4:3.01:0,3,53	0/0:2,0:2:6:0,6,54	0/0:2,0:2:3.01:0,3,52	0/0:1,0:1:3.01:0,3,49	0/0:8,0:8:21.04:0,21,290	0/0:2,0:2:6.02:0,6,105	0/0:2,0:2:6:0,6,54	1/1:1,16:17:33.11:420,33,0	1/1:1,10:11:21.07:267,21,0	1/1:0,20:20:42.13:534,42,0	1/1:0,19:18:42.13:534,42,0	0/0:6,0:6:18.06:0,18,315	./.	0/0:6,0:6:15.05:0,15,259	0/0:2,0:2:6.02:0,6,92	0/0:3,0:3:5.99:0,6,73	./.	1/1:0,13:13:21.07:265,21,0	1/1:2,8:10:27.06:325,27,0	1/1:1,10:11:24.08:305,24,0	0/1:2,3:5:29.26:29,0,32
chr10	5099561	.	A	ATG	10934.40	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-18.539;DP=1040;FS=2.779;HRun=0;HaplotypeScore=115.4024;InbreedingCoeff=0.9998;MQ=62.42;MQ0=7;MQRankSum=-0.913;QD=35.97;ReadPosRankSum=5.584;VQSLOD=7.1998;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:13,51:67:99:2176,129,0	0/0:19,0:19:48.16:0,48,616	0/0:45,0:31:75.20:0,75,946	0/0:37,0:29:51.94:0,52,665	0/0:37,0:37:99:0,105,1337	0/0:23,0:23:57.18:0,57,733	0/0:51,0:51:99:0,117,1491	0/0:40,0:40:90.29:0,90,1158	0/0:56,0:56:99:0,144,1838	0/0:36,0:36:96.31:0,96,1235	0/0:25,0:25:63.19:0,63,796	0/0:48,0:48:99:0,132,1682	0/0:41,0:41:99:0,102,1298	0/0:43,0:43:99:0,108,1389	1/1:8,49:58:99:2328,138,0	1/1:5,28:33:69.24:1165,69,0	0/0:26,0:26:72.23:0,72,926	1/1:8,25:33:27.61:1024,28,0	0/0:15,0:14:39.13:0,39,502	0/0:25,0:25:63.20:0,63,811	0/0:84,0:84:99:0,196,2494	0/0:23,0:23:53.95:0,54,681	0/0:24,0:24:63.19:0,63,795	0/0:37,0:37:96.31:0,96,1236	1/1:1,24:24:54.18:911,54,0	1/1:3,23:26:69.21:1137,69,0	1/1:7,30:39:78.26:1291,78,0	1/1:3,18:21:57.13:902,57,0
chr10	5100095	.	A	ACC	589.43	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.725;DP=650;FS=5.834;HRun=7;HaplotypeScore=124.5282;InbreedingCoeff=0.9828;MQ=68.79;MQ0=4;MQRankSum=-3.333;QD=20.33;ReadPosRankSum=-4.863;VQSLOD=0.7025;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:16,13:29:59.79:684,60,0	0/0:16,0:16:36.03:0,36,382	0/0:22,0:19:51.05:0,51,530	0/0:24,0:23:45.10:0,45,507	0/0:21,0:21:60.15:0,60,677	0/0:27,0:27:78.14:0,78,844	0/0:40,0:40:99:0,99,1119	0/0:15,0:15:36.10:0,36,418	0/0:20,0:20:32.50:0,33,593	0/0:28,0:28:81.22:0,81,919	0/0:15,0:15:36.10:0,36,419	0/0:34,0:34:81.19:0,81,921	0/0:24,0:24:66.18:0,66,757	0/0:29,0:29:69.13:0,69,771	0/0:16,0:16:23.96:0,24,243	0/0:14,0:14:20.43:0,20,175	0/0:22,0:22:48.11:0,48,545	0/0:23,0:23:45.11:0,45,508	0/0:18,0:18:44.34:0,44,495	0/0:17,0:17:51.14:0,51,583	0/0:35,0:35:90.15:0,90,997	0/0:17,0:18:41.83:0,42,456	0/0:27,0:27:56.49:0,56,624	0/0:45,0:44:99:0,99,1153	0/0:12,0:12:17.59:0,18,167	0/0:24,0:24:63.17:0,63,751	0/0:17,0:17:41.55:0,42,412	0/0:14,0:14:27.06:0,27,308
chr10	5100115	.	G	GCA	414.84	PASS	AB=0.972;AC=10;AF=0.179;AN=56;BaseQRankSum=9.323;DP=657;FS=9.182;HRun=0;HaplotypeScore=139.1772;InbreedingCoeff=-0.0050;MQ=56.73;MQ0=10;MQRankSum=-7.736;QD=2.05;ReadPosRankSum=0.947;VQSLOD=2.1653;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:35,0:34:7.32:7,0,17	0/0:13,0:13:30.09:0,30,432	0/0:23,0:13:35.30:0,35,445	0/0:26,0:17:36.01:0,36,502	0/0:23,0:23:63.13:0,63,893	0/0:23,0:23:69.19:0,69,1026	0/0:32,0:32:90.28:0,90,1319	0/0:20,0:20:50.36:0,50,386	0/0:13,0:13:36.07:0,36,479	0/0:31,0:31:87.29:0,87,1320	0/0:15,0:15:42.09:0,42,595	0/0:29,0:29:84.21:0,84,1207	0/0:24,0:24:63.20:0,63,933	0/0:24,0:24:72.23:0,72,1077	0/1:20,0:20:17.13:38,0,17	0/1:12,5:17:40.22:145,0,40	0/1:29,0:27:54.28:54,0,55	0/1:27,0:27:70.48:99,0,70	0/0:20,0:18:48.07:0,48,658	0/0:22,0:22:57.19:0,57,865	0/0:35,0:35:99:0,99,1441	0/0:20,0:20:57.18:0,57,822	0/0:22,0:22:60.12:0,60,842	0/0:40,0:39:99:0,105,1506	0/1:18,0:18:14.26:45,0,14	0/1:25,0:25:94.13:94,0,137	1/1:16,0:16:2.99:67,3,0	0/1:15,0:15:2.22:2,0,26
chr10	5100117	.	G	GCACGCA	1309.44	PASS	AB=1.000;AC=10;AF=0.179;AN=56;BaseQRankSum=11.014;DP=653;FS=32.196;HRun=0;HaplotypeScore=181.3864;InbreedingCoeff=0.0297;MQ=54.94;MQ0=11;MQRankSum=-8.605;QD=6.61;ReadPosRankSum=4.373;VQSLOD=1.3911;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:34,0:33:13.86:33,0,14	0/0:14,0:14:32.76:0,33,578	0/0:24,0:13:29.96:0,30,529	0/0:23,0:14:36.03:0,36,664	0/0:22,0:22:59.92:0,60,1224	0/0:23,0:23:66.18:0,66,1457	0/0:32,0:32:90.26:0,90,1847	0/0:21,0:21:14.36:0,14,366	0/0:11,0:11:33.09:0,33,644	0/0:32,0:32:93.22:0,93,1933	0/0:15,0:15:42.09:0,42,894	0/0:29,0:29:81.22:0,81,1739	0/0:23,0:23:63.16:0,63,1269	0/0:25,0:25:69.24:0,69,1579	0/1:20,0:20:21.73:131,0,22	1/1:12,5:17:12.26:515,12,0	0/1:29,0:27:61.98:62,0,69	0/1:27,0:27:90.24:90,0,180	0/0:20,0:17:47.94:0,48,840	0/0:23,0:23:63.11:0,63,1282	0/0:35,0:35:99:0,99,2188	0/0:20,0:20:57.18:0,57,1220	0/0:23,0:23:57.14:0,57,1181	0/0:40,0:39:99:0,102,2095	0/1:17,0:17:14.72:249,0,15	0/1:25,0:25:99:142,0,107	0/1:15,0:15:23.46:153,0,23	0/1:14,0:14:45.82:83,0,46
chr10	5100121	.	A	ACG	610.22	PASS	AB=0.975;AC=11;AF=0.196;AN=56;BaseQRankSum=11.457;DP=651;FS=21.970;HRun=0;HaplotypeScore=132.7082;InbreedingCoeff=0.2157;MQ=53.91;MQ0=13;MQRankSum=-10.186;QD=3.25;ReadPosRankSum=5.488;VQSLOD=0.6330;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:29,4:32:11:34,0,11	0/0:13,0:13:17.79:0,18,212	0/0:29,0:12:27:0,27,288	0/0:27,0:18:45.09:0,45,504	0/0:21,0:21:60.13:0,60,753	0/0:23,0:23:66.11:0,66,812	0/0:31,0:31:72.11:0,72,873	0/0:23,0:23:50.31:0,50,436	0/0:11,0:11:26.74:0,27,335	0/0:33,0:33:73.94:0,74,1063	0/0:14,0:14:36.06:0,36,439	0/0:28,0:28:78.13:0,78,963	0/0:23,0:23:57.11:0,57,700	0/0:24,0:25:65.97:0,66,813	0/1:19,0:19:13.19:39,0,13	0/1:17,0:17:43.96:44,0,100	0/1:26,2:26:49.98:69,0,50	0/1:23,0:23:20.83:54,0,21	0/0:20,0:17:41.93:0,42,427	0/0:24,0:24:63.15:0,63,823	0/0:36,0:36:99:0,99,1160	0/0:21,0:21:29.42:0,29,620	0/0:21,0:21:34.34:0,34,621	0/0:40,0:39:99:0,99,1240	1/1:17,0:17:14.12:83,14,0	0/1:23,0:23:99:204,0,104	1/1:14,0:14:13.72:161,14,0	0/1:14,0:14:24.29:80,0,24
chr10	5100123	.	GCA	G	632.89	PASS	AB=0.918;AC=14;AF=0.250;AN=56;BaseQRankSum=4.362;DP=636;FS=11.820;HRun=0;HaplotypeScore=125.8830;InbreedingCoeff=-0.1523;MQ=53.37;MQ0=13;MQRankSum=1.406;QD=2.05;ReadPosRankSum=-2.870;VQSLOD=1.2311;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:32:5.93:0,6,40	0/0:7,2:9:15.05:0,15,239	0/0:32,0:11:12.04:0,12,184	0/0:28,0:18:21.05:0,21,310	0/1:19,2:21:14.77:15,0,731	0/0:22,1:23:18.18:0,18,729	0/1:27,2:29:11.71:12,0,772	1/1:10,13:23:19.20:410,19,0	0/1:11,0:11:40.92:41,0,353	0/0:30,2:33:3.30:0,3,936	0/1:13,1:14:5.82:6,0,382	0/1:25,2:27:2.55:3,0,908	0/0:20,0:20:45.14:0,45,690	0/1:22,2:24:32.58:33,0,749	0/0:16,0:19:8.89:0,9,61	0/0:16,0:16:26.01:0,26,165	0/0:17,0:26:7.24:0,7,113	0/1:19,0:22:22.14:22,0,44	0/1:17,1:15:5.92:6,0,346	0/0:24,1:25:24.22:0,24,847	0/1:29,7:36:99:158,0,984	0/1:18,2:21:23.43:23,0,593	0/0:18,1:20:9.22:0,9,605	0/1:34,5:38:20.57:21,0,1153	0/0:16,0:17:14.75:0,15,95	0/1:21,0:23:36.43:36,0,191	0/0:13,0:13:24.95:0,25,169	0/0:10,0:12:17.80:0,18,120
chr10	5100125	.	A	ACGCACGCGCG	5269.15	PASS	AB=0.848;AC=17;AF=0.304;AN=56;BaseQRankSum=11.635;DP=648;FS=24.420;HRun=0;HaplotypeScore=200.8257;InbreedingCoeff=0.7016;MQ=53.37;MQ0=14;MQRankSum=-8.542;QD=24.74;ReadPosRankSum=1.795;VQSLOD=2.7032;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:32:6.01:164,6,0	0/0:9,0:9:17.65:0,18,552	0/0:35,0:12:30.09:0,30,695	0/0:28,0:18:38.25:0,38,966	0/0:23,0:23:63.20:0,63,1845	0/0:22,0:22:66.21:0,66,2002	0/0:31,0:31:77.46:0,77,2046	0/1:23,0:23:99:171,0,104	0/0:10,0:10:7.37:0,7,737	0/0:33,0:33:84.14:0,84,2634	0/0:14,0:14:39.12:0,39,1183	0/0:28,0:28:78.25:0,78,2300	0/0:22,0:22:32.52:0,33,1547	0/0:25,0:25:69.20:0,69,2038	1/1:6,9:19:9.03:473,9,0	0/1:16,0:17:17.57:448,0,18	1/1:20,0:26:29.83:564,30,0	0/1:8,9:24:27.25:524,0,27	0/0:18,0:15:42.13:0,42,938	0/0:25,0:25:69.21:0,69,1983	0/0:34,0:34:98.80:0,99,2778	0/0:20,0:20:57.18:0,57,1527	0/0:20,0:20:53.97:0,54,1540	0/0:38,0:37:99:0,99,2951	1/1:1,12:17:15.05:736,15,0	1/1:4,0:24:63.10:1100,63,0	1/1:1,0:14:30.10:656,30,0	1/1:5,0:14:18.06:432,18,0
chr10	5100363	.	CGTGT	C	603.45	PASS	AB=0.853;AC=4;AF=0.071;AN=56;BaseQRankSum=2.981;DP=701;FS=1.851;HRun=0;HaplotypeScore=134.4268;InbreedingCoeff=0.3898;MQ=66.40;MQ0=10;MQRankSum=-1.128;QD=9.01;ReadPosRankSum=-3.265;VQSLOD=1.9723;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:27:4.68:0,5,15	0/0:11,0:11:27.09:0,27,657	0/0:32,0:25:24.07:0,24,435	0/0:28,0:20:18.06:0,18,363	0/0:18,0:18:35.86:0,36,777	0/0:22,0:22:39.07:0,39,795	0/0:33,0:33:80.98:0,81,1759	1/1:26,14:40:46.93:680,47,0	0/0:26,0:26:45.15:0,45,1056	0/0:24,0:24:47.90:0,48,1035	0/1:7,1:12:25.49:25,0,397	0/0:18,0:19:41.88:0,42,883	0/0:21,1:22:4.38:0,4,1028	0/0:24,0:24:46.63:0,47,901	0/0:24,0:25:23.64:0,24,376	0/0:36,0:29:27.03:0,27,313	0/0:22,0:19:8.90:0,9,102	0/0:24,0:24:30.09:0,30,517	0/0:34,0:32:29.41:0,29,891	0/0:19,0:19:33.11:0,33,786	0/0:38,0:39:62.95:0,63,1370	0/0:26,0:24:41.72:0,42,871	0/0:25,1:26:35.76:0,36,1118	0/0:32,0:32:60.41:0,60,1382	0/1:15,0:13:10.93:11,0,162	0/0:15,0:28:53.73:0,54,721	0/0:20,0:21:31.34:0,31,514	0/0:13,0:13:17.81:0,18,242
chr10	5100388	.	GT	G	798.64	PASS	AB=0.918;AC=8;AF=0.143;AN=56;BaseQRankSum=8.161;DP=694;FS=7.130;HRun=2;HaplotypeScore=107.4247;InbreedingCoeff=0.1128;MQ=52.14;MQ0=19;MQRankSum=-2.673;QD=4.46;ReadPosRankSum=-0.952;VQSLOD=-0.0738;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:28,6:31:9.28:179,9,0	0/0:18,0:18:48.16:0,48,674	0/0:20,0:7:18.03:0,18,190	0/0:23,0:8:18.05:0,18,202	0/0:19,0:19:47.37:0,47,628	0/0:28,0:28:76.49:0,76,999	0/0:38,0:38:99:0,104,1356	0/1:30,2:30:50.84:51,0,359	0/0:20,0:20:54.16:0,54,747	0/0:29,0:29:75.07:0,75,998	0/0:13,0:13:25.32:0,25,299	0/0:30,0:30:80.03:0,80,1012	0/0:27,0:27:79.20:0,79,1019	0/0:23,0:23:59.67:0,60,735	0/0:27,0:28:14.37:0,14,173	0/1:28,9:29:12.58:327,0,13	0/1:18,1:16:5.54:6,0,19	0/0:23,0:22:12.56:0,13,180	0/0:25,1:24:16.96:0,17,614	0/0:15,0:15:45.15:0,45,639	0/0:33,0:32:77.47:0,77,1042	0/0:24,0:22:56.39:0,56,738	0/0:25,0:24:61.23:0,61,827	0/0:40,0:40:94.28:0,94,1230	0/0:12,0:12:9.02:0,9,107	0/1:25,1:25:99:196,0,317	0/1:22,1:22:92.39:92,0,252	0/1:7,1:7:65.52:83,0,66
chr10	5100389	.	TTGTG	T	217.21	PASS	AB=0.950;AC=7;AF=0.130;AN=54;BaseQRankSum=4.091;DP=694;FS=0.000;HRun=0;HaplotypeScore=140.9376;InbreedingCoeff=0.6520;MQ=52.15;MQ0=21;MQRankSum=-0.416;QD=2.65;ReadPosRankSum=0.406;VQSLOD=2.5323;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:30:7.15:0,7,19	0/0:18,0:18:42.57:0,43,893	0/0:18,0:6:3.01:0,3,48	./.	0/0:19,0:19:38.78:0,39,771	0/0:29,0:28:74.93:0,75,1554	0/0:40,0:40:90.29:0,90,1765	0/0:32,0:30:54.09:0,54,681	0/0:21,0:21:42.13:0,42,746	0/0:30,0:29:51.60:0,52,971	0/0:13,0:13:21.07:0,21,361	0/0:30,0:30:69.13:0,69,1457	0/0:28,0:28:75.16:0,75,1540	0/0:23,0:23:54.65:0,55,1139	1/1:8,20:28:5.74:96,6,0	0/0:27,0:28:1.29:0,1,263	0/1:3,0:16:1.01:87,0,1	1/1:7,16:22:5.84:103,6,0	0/0:26,0:24:29.97:0,30,802	0/0:15,0:15:36.12:0,36,783	0/0:33,0:33:63.56:0,64,1382	0/0:23,0:21:45:0,45,909	0/0:25,0:24:54.18:0,54,1057	0/0:40,0:40:94.40:0,94,1953	1/1:5,7:12:2.69:52,3,0	0/0:23,0:25:55.15:0,55,667	0/0:20,0:22:46.65:0,47,605	0/0:6,0:7:14.67:0,15,167
chr10	5100404	.	TGA	T	378.21	PASS	AB=0.991;AC=10;AF=0.200;AN=50;BaseQRankSum=3.565;DP=650;FS=1.245;HRun=0;HaplotypeScore=113.5762;InbreedingCoeff=0.3565;MQ=52.07;MQ0=20;MQRankSum=-0.290;QD=2.29;ReadPosRankSum=-2.585;VQSLOD=1.6326;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:16,0:16:28.76:0,29,359	./.	./.	0/0:18,0:19:13:0,13,409	0/0:33,1:33:13.19:0,13,830	0/0:37,1:38:25.38:0,25,716	1/1:26,1:25:32.90:300,33,0	0/0:17,0:17:20.91:0,21,254	0/1:30,0:28:37.27:37,0,487	0/0:11,0:10:3.01:0,3,47	0/0:30,0:29:9.37:0,9,750	0/1:27,0:28:15.79:16,0,749	0/0:22,1:23:36.29:0,36,544	0/0:26,0:26:1.96:0,2,58	0/1:38,0:32:83.24:83,0,119	1/1:9,0:7:8.93:68,9,0	0/0:22,0:21:16.48:0,16,114	0/1:22,0:21:3.56:4,0,373	0/0:15,0:14:24.08:0,24,357	0/0:31,0:31:57.13:0,57,766	0/0:20,0:20:30.37:0,30,465	0/0:25,0:23:33.05:0,33,427	0/0:41,1:42:15.58:0,16,1020	1/1:11,0:10:2.37:8,2,0	0/0:29,0:26:41.77:0,42,602	0/0:25,1:25:29.95:0,30,501	0/0:7,0:6:9.90:0,10,120
chr10	5100425	.	GAGAC	G	528.40	PASS	AB=0.992;AC=7;AF=0.140;AN=50;BaseQRankSum=3.490;DP=658;FS=19.000;HRun=0;HaplotypeScore=133.4579;InbreedingCoeff=0.4281;MQ=52.16;MQ0=20;MQRankSum=-0.378;QD=4.85;ReadPosRankSum=-4.464;VQSLOD=-0.3251;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:15,0:15:11.46:0,11,479	./.	./.	0/0:23,0:23:49.62:0,50,792	0/0:32,0:30:85.05:0,85,1744	0/0:38,0:35:73.21:0,73,1380	0/0:35,0:33:35.82:0,36,490	0/0:17,0:17:45.02:0,45,682	0/0:29,0:27:77.83:0,78,1216	0/0:11,0:10:17.36:0,17,185	0/0:30,0:29:55.14:0,55,1507	0/0:30,0:30:42.13:0,42,1325	0/0:24,0:24:33.95:0,34,860	0/1:27,0:27:21.99:173,0,22	0/1:38,1:35:99:169,0,145	1/1:7,0:6:6.87:53,7,0	0/1:24,0:24:60.61:177,0,61	0/0:26,0:24:53.35:0,53,837	0/0:16,0:15:35.38:0,35,562	0/0:34,0:33:69.12:0,69,1281	0/0:17,0:17:40.88:0,41,800	0/0:19,0:18:39.08:0,39,729	0/0:43,0:43:99:0,104,1934	1/1:12,0:12:9:85,9,0	0/0:24,0:22:47.58:0,48,902	0/0:26,0:25:68.36:0,68,1159	0/0:18,0:16:24.18:0,24,542
chr10	5100427	.	GAC	G	1026.68	PASS	AB=1.000;AC=11;AF=0.220;AN=50;BaseQRankSum=5.744;DP=643;FS=21.404;HRun=0;HaplotypeScore=107.1495;InbreedingCoeff=0.8350;MQ=52.19;MQ0=19;MQRankSum=-0.831;QD=7.39;ReadPosRankSum=-2.273;VQSLOD=1.4932;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:14,1:15:11.32:0,11,359	./.	./.	0/0:22,0:22:47.50:0,47,637	0/0:32,0:30:70.03:0,70,1240	0/0:37,0:34:65.20:0,65,1029	0/1:33,0:31:26.38:26,0,313	0/0:17,0:17:45:0,45,516	0/0:29,0:27:51.74:0,52,894	0/0:10,0:9:17.36:0,17,163	0/0:32,0:31:66.67:0,67,1111	0/0:30,0:30:48.50:0,49,1009	0/0:23,0:23:20.87:0,21,663	1/1:25,2:27:23.21:191,23,0	1/1:37,2:36:61.54:616,62,0	1/1:7,0:6:5.19:17,5,0	1/1:22,0:22:32.97:231,33,0	0/0:27,0:25:49.89:0,50,736	0/0:16,0:15:35.34:0,35,436	0/0:31,0:30:69.12:0,69,1012	0/0:16,0:16:23.58:0,24,576	0/0:17,0:16:39.08:0,39,611	0/0:44,0:44:67.12:0,67,1474	1/1:11,0:11:12:109,12,0	0/0:24,0:22:44.30:0,44,837	0/0:27,0:26:71.66:0,72,916	0/0:17,0:15:24.11:0,24,388
chr10	5103911	.	A	AACAC	722.14	PASS	AB=0.916;AC=17;AF=0.327;AN=52;BaseQRankSum=3.819;DP=617;FS=0.771;HRun=0;HaplotypeScore=126.5004;InbreedingCoeff=0.4496;MQ=62.91;MQ0=16;MQRankSum=-3.020;QD=2.74;ReadPosRankSum=-2.555;VQSLOD=1.3541;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:17.74:0,18,251	0/0:4,0:5:6.01:0,6,74	./.	./.	0/0:18,0:18:14.93:0,15,184	0/0:20,0:21:2.57:0,3,156	0/0:23,0:25:11.90:0,12,127	1/1:21,0:21:11.90:94,12,0	0/0:20,0:19:14.94:0,15,153	0/0:16,0:16:7.94:0,8,127	0/0:15,0:14:14.78:0,15,167	0/0:32,0:32:20.31:0,20,283	0/0:19,0:19:12.02:0,12,184	0/0:22,0:23:5.56:0,6,166	0/1:19,0:26:31.79:46,0,32	1/1:11,16:29:17.81:394,18,0	1/1:23,0:23:16:155,16,0	0/1:12,0:11:16.32:38,0,16	0/0:20,0:19:11.31:0,11,131	0/0:15,0:15:14.90:0,15,191	0/1:37,0:35:0.11:0,0,125	0/0:21,0:21:14.98:0,15,204	0/0:18,0:18:21.01:0,21,248	0/1:35,0:38:9.70:10,0,492	0/1:17,0:23:7.37:7,0,95	1/1:21,0:20:2.96:19,3,0	1/1:17,0:22:6.55:31,7,0	1/1:5,1:9:8.50:94,8,0
chr10	5104347	.	AAAAC	A	4218.99	PASS	AB=0.826;AC=15;AF=0.268;AN=56;BaseQRankSum=13.331;DP=781;FS=3.001;HRun=0;HaplotypeScore=139.7799;InbreedingCoeff=0.7187;MQ=63.54;MQ0=0;MQRankSum=-1.959;QD=15.23;ReadPosRankSum=-0.022;VQSLOD=4.1667;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,31:45:75.21:1191,75,0	0/0:13,0:13:18.06:0,18,430	0/0:30,0:26:15.01:0,15,252	0/0:30,0:25:24.08:0,24,506	0/0:29,0:29:54.17:0,54,1207	0/0:26,0:26:57.20:0,57,1353	0/0:30,0:30:54.19:0,54,1268	1/1:28,12:37:33.09:483,33,0	0/1:23,3:26:88.70:89,0,1003	0/0:34,0:34:66.23:0,66,1556	0/0:15,0:15:27.09:0,27,645	0/0:29,1:30:21.61:0,22,1520	0/0:33,0:33:69.24:0,69,1617	0/0:24,0:24:54.19:0,54,1270	0/1:14,0:34:23.59:370,0,24	1/1:9,19:28:48.16:762,48,0	1/1:8,23:31:63.21:1000,63,0	1/1:7,0:13:15.01:139,15,0	0/0:22,0:21:36.10:0,36,797	0/0:24,0:24:57.15:0,57,1264	0/1:38,2:40:16.99:17,0,1633	0/0:18,0:18:33.11:0,33,781	0/0:18,0:18:36.12:0,36,840	0/0:47,0:47:99:0,105,2458	1/1:11,0:20:17.86:167,18,0	0/0:33,0:33:63.22:0,63,1479	0/0:37,1:38:24.62:0,25,1534	0/0:10,0:10:24.08:0,24,554
chr10	5104893	.	GAAGT	G	4298.80	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=11.511;DP=642;FS=2.029;HRun=0;HaplotypeScore=106.1811;InbreedingCoeff=0.9940;MQ=88.77;MQ0=0;MQRankSum=-6.568;QD=42.56;ReadPosRankSum=4.706;VQSLOD=5.4492;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,37:41:84.29:1559,84,0	0/0:6,0:6:18.06:0,18,480	0/0:29,0:30:78.32:0,78,1840	0/0:20,0:21:32.40:0,32,1004	0/0:21,0:21:63.22:0,63,1638	0/0:17,0:17:51.18:0,51,1341	0/0:25,0:25:69.24:0,69,1812	0/0:34,0:34:96.31:0,96,2445	0/0:25,0:25:69.24:0,69,1738	0/0:22,0:22:63.22:0,63,1670	0/0:16,0:16:45.15:0,45,1179	0/0:33,0:33:99:0,99,2609	0/0:14,0:14:33.11:0,33,861	0/0:23,0:23:69.21:0,69,1766	0/0:16,0:16:39.13:0,39,1021	1/1:1,19:20:54.19:1004,54,0	1/1:4,36:40:93.32:1736,93,0	0/0:29,0:29:84.29:0,84,2201	0/0:22,0:22:57.20:0,57,1472	0/0:12,0:12:36.12:0,36,946	0/0:47,0:47:99:0,141,3703	0/0:16,0:16:48.16:0,48,1280	0/0:20,0:20:60.19:0,60,1479	0/0:31,0:31:93.32:0,93,2368	0/0:17,0:17:39.13:0,39,1040	0/0:22,0:22:66.23:0,66,1681	0/0:16,0:16:48.16:0,48,1242	0/0:6,0:6:18.06:0,18,462
chr10	5106725	.	G	GTTTGT	5620.74	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-11.207;DP=680;FS=3.724;HRun=0;HaplotypeScore=121.1096;InbreedingCoeff=0.9944;MQ=72.56;MQ0=2;MQRankSum=-1.131;QD=54.57;ReadPosRankSum=1.311;VQSLOD=5.0362;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,31:47:96.33:2704,96,0	0/0:8,0:8:24.08:0,24,439	0/0:27,0:22:17.40:0,17,197	0/0:38,0:31:25.84:0,26,598	0/0:31,0:31:69.22:0,69,1196	0/0:21,0:21:42.14:0,42,786	0/0:22,0:22:45.13:0,45,751	0/0:27,0:27:42.11:0,42,633	0/0:21,0:21:60.20:0,60,1082	0/0:28,0:28:60.20:0,60,1098	0/0:16,0:16:42.13:0,42,755	0/0:23,0:23:60.21:0,60,1123	0/0:22,0:22:51.17:0,51,934	0/0:27,0:27:57.19:0,57,1026	0/0:24,0:24:57.20:0,57,1067	1/1:5,13:20:39.13:1118,39,0	1/1:9,27:36:63.22:1798,63,0	0/0:22,0:22:30.10:0,30,516	0/0:20,0:20:27.05:0,27,421	0/0:17,0:17:33.11:0,33,617	0/0:19,0:19:36.12:0,36,674	0/0:20,0:20:42.14:0,42,765	0/0:22,0:22:51.16:0,51,922	0/0:26,0:26:57.19:0,57,1030	0/0:14,0:14:27.09:0,27,499	0/0:28,0:28:60.20:0,60,1102	0/0:32,0:32:69.22:0,69,1257	0/0:21,0:21:51.17:0,51,954
chr10	5107053	.	G	GTT	2390.69	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-1.470;DP=395;FS=1.191;HRun=9;HaplotypeScore=52.6793;InbreedingCoeff=0.9292;MQ=72.33;MQ0=8;MQRankSum=-3.299;QD=29.51;ReadPosRankSum=1.358;VQSLOD=3.5645;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,4:12:24.08:342,24,0	0/0:7,0:7:21.05:0,21,223	0/0:47,0:13:7.62:0,8,60	0/0:38,0:15:16.51:0,17,145	0/0:24,0:24:60.09:0,60,630	0/0:19,0:19:51.11:0,51,541	0/0:15,0:15:30.06:0,30,319	0/0:24,0:24:60.11:0,60,622	0/0:6,0:6:12.02:0,12,128	0/0:13,0:13:36.09:0,36,383	0/0:13,0:13:36.09:0,36,382	0/0:8,0:8:21.05:0,21,223	0/0:5,0:5:15.01:0,15,150	0/0:5,0:5:9.02:0,9,96	1/1:2,5:7:21.07:319,21,0	1/1:4,1:5:9.03:135,9,0	1/1:6,21:28:42.14:646,42,0	1/1:6,15:19:51.16:762,51,0	0/0:15,0:15:42.05:0,42,434	0/0:11,0:11:27.02:0,27,275	0/0:8,0:8:18.03:0,18,191	0/0:6,0:6:12.03:0,12,128	0/0:8,0:8:15.03:0,15,160	0/0:5,0:5:15:0,15,147	1/1:1,7:8:24.08:369,24,0	0/0:5,0:11:27.70:0,28,126	0/0:1,0:6:16.47:0,16,72	0/0:2,0:18:20.20:0,20,137
chr10	5107081	.	A	ATT	519.85	PASS	AB=0.851;AC=4;AF=0.071;AN=56;BaseQRankSum=5.778;DP=368;FS=7.350;HRun=4;HaplotypeScore=60.9293;InbreedingCoeff=-0.0923;MQ=72.42;MQ0=6;MQRankSum=-2.961;QD=7.43;ReadPosRankSum=-0.450;VQSLOD=-0.7335;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:27.04:0,27,275	0/0:10,0:10:30.08:0,30,420	0/0:32,0:10:8.69:0,9,143	0/1:37,0:19:16.39:16,0,137	0/0:16,0:16:45.14:0,45,637	0/0:19,0:19:54.15:0,54,733	0/0:11,0:11:30.10:0,30,426	0/0:25,0:25:60.06:0,60,835	0/0:5,0:5:15.04:0,15,197	0/0:13,0:13:36.10:0,36,493	0/0:14,0:14:42.13:0,42,583	0/0:11,0:11:33.08:0,33,446	0/0:9,0:9:24.08:0,24,341	0/0:4,0:4:12.02:0,12,156	0/0:7,0:7:21.02:0,21,211	0/0:4,0:4:9.03:0,9,111	0/0:30,0:30:75.17:0,75,1017	0/0:24,0:22:51.85:0,52,534	0/0:13,0:13:21.70:0,22,432	0/0:9,0:9:27.06:0,27,358	0/0:5,0:5:12.04:0,12,173	0/0:1,0:1:3.01:0,3,44	0/0:9,0:9:21.07:0,21,306	0/0:6,0:6:15.05:0,15,214	0/0:11,0:11:30.06:0,30,362	0/1:10,2:12:99:209,0,101	0/1:5,3:8:90.78:170,0,91	0/1:9,2:11:29.48:233,0,29
chr10	5107084	.	A	AT	1555.49	PASS	AB=0.865;AC=17;AF=0.304;AN=56;BaseQRankSum=2.685;DP=360;FS=0.551;HRun=10;HaplotypeScore=49.2593;InbreedingCoeff=0.6719;MQ=71.84;MQ0=5;MQRankSum=-5.861;QD=10.04;ReadPosRankSum=0.721;VQSLOD=2.0431;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,11:12:21.05:224,21,0	0/0:9,0:9:23.97:0,24,197	0/1:30,0:10:12.18:12,0,82	0/1:34,0:17:14.11:14,0,35	0/0:14,0:14:26.95:0,27,222	0/0:17,1:18:12.96:0,13,313	0/0:12,0:12:32.92:0,33,267	0/0:23,0:23:29.67:0,30,246	0/0:6,0:6:11.96:0,12,95	0/0:11,0:11:23.94:0,24,197	0/0:14,0:14:32.95:0,33,271	0/0:11,0:11:23.95:0,24,197	0/0:8,0:9:23:0,23,178	0/0:4,0:4:11.99:0,12,98	1/1:1,6:7:18.05:192,18,0	1/1:1,3:4:6.02:64,6,0	0/0:30,1:31:36.96:0,37,510	1/1:6,18:23:56.95:579,57,0	0/0:13,0:13:26.31:0,26,240	0/0:10,0:10:20.97:0,21,172	0/0:4,0:4:5.99:0,6,49	0/0:1,0:1:3:0,3,25	0/0:9,0:9:26.96:0,27,219	0/0:6,0:6:17.98:0,18,147	0/1:4,6:10:25.23:168,0,25	1/1:7,6:13:20.99:210,21,0	1/1:5,5:10:17.67:155,18,0	1/1:6,3:9:14.85:132,15,0
chr10	5107604	.	AG	A	1577.70	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=7.250;DP=611;FS=0.596;HRun=1;HaplotypeScore=57.8424;InbreedingCoeff=0.9979;MQ=79.95;MQ0=0;MQRankSum=-1.095;QD=30.34;ReadPosRankSum=2.694;VQSLOD=3.3885;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,117,1813	0/0:9,0:9:24.08:0,24,379	0/0:20,0:20:57.03:0,57,795	0/0:20,0:18:43.91:0,44,621	0/0:20,0:20:60.20:0,60,944	0/0:27,0:27:75.22:0,75,1140	0/0:25,0:25:75.25:0,75,1175	0/0:28,0:28:84.28:0,84,1316	0/0:22,0:22:66.19:0,66,998	0/0:35,0:35:99:0,105,1660	0/0:10,0:10:30.10:0,30,479	0/0:34,0:34:99:0,102,1595	0/0:22,0:22:66.22:0,66,1050	0/0:20,0:20:60.20:0,60,959	1/1:0,23:23:60.20:839,60,0	0/0:19,0:19:57.16:0,57,864	0/0:23,0:23:69.24:0,69,1103	1/1:0,18:18:33.11:462,33,0	0/0:29,0:29:84.29:0,84,1336	0/0:12,0:12:36.12:0,36,568	0/0:44,0:44:99:0,129,2051	0/0:19,0:19:57.17:0,57,886	0/0:11,0:11:33.11:0,33,525	0/0:20,0:20:60.20:0,60,957	1/1:0,11:11:30.10:420,30,0	0/0:21,0:21:63.21:0,63,1004	0/0:22,0:22:66.22:0,66,1013	0/0:8,0:8:24.08:0,24,380
chr10	5108564	.	A	AC	7016	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-12.282;DP=535;FS=7.199;HRun=0;HaplotypeScore=49.4582;InbreedingCoeff=0.9940;MQ=76.49;MQ0=0;MQRankSum=-1.734;QD=41.51;ReadPosRankSum=3.947;VQSLOD=5.1586;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,32:33:84.29:1342,84,0	0/0:8,0:8:24.08:0,24,336	0/0:17,0:16:48.12:0,48,617	0/0:33,0:33:96.27:0,96,1297	0/0:16,0:16:45.13:0,45,611	0/0:9,0:9:27.09:0,27,378	0/0:21,0:21:63.21:0,63,880	0/0:37,0:37:99:0,111,1505	0/0:25,0:25:72.21:0,72,970	0/0:14,0:14:42.14:0,42,583	0/0:13,0:13:39.12:0,39,531	0/0:19,0:19:54.16:0,54,735	0/0:10,0:10:30.10:0,30,419	0/0:17,0:17:51.17:0,51,713	1/1:1,15:16:42.14:671,42,0	1/1:1,16:17:42.14:671,42,0	1/1:0,19:19:51.17:815,51,0	1/1:1,20:21:51.17:815,51,0	0/0:12,0:12:33.11:0,33,458	0/0:14,0:14:42.14:0,42,587	0/0:46,0:46:99:0,132,1825	0/0:12,0:12:30.10:0,30,419	0/0:14,0:14:42.14:0,42,587	0/0:29,0:29:81.27:0,81,1131	1/1:0,18:18:45.15:719,45,0	1/1:1,17:18:12.19:739,12,0	1/1:0,8:8:21.07:334,21,0	1/1:0,19:19:57.19:910,57,0
chr10	5109201	.	AACACACACACACAC	A	832.99	PASS	AB=0.830;AC=6;AF=0.115;AN=52;BaseQRankSum=4.127;DP=522;FS=0.000;HRun=0;HaplotypeScore=184.1618;InbreedingCoeff=0.4859;MQ=63.86;MQ0=9;MQRankSum=-2.239;QD=9.15;ReadPosRankSum=1.391;VQSLOD=2.5448;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:25:11.64:225,12,0	0/0:10,0:10:6.02:0,6,195	./.	./.	0/0:15,0:15:18.53:0,19,880	0/0:17,0:16:21.04:0,21,478	0/0:25,0:25:21.07:0,21,672	0/0:23,0:23:2.01:0,2,6	0/0:9,0:9:18.06:0,18,805	0/0:25,0:25:30.98:0,31,1156	0/0:3,0:3:5.93:0,6,217	0/0:15,0:13:18.04:0,18,684	0/0:6,0:6:3.01:0,3,145	0/0:10,0:9:9.03:0,9,315	0/1:21,0:22:23.35:23,0,197	1/1:10,0:18:16.61:491,17,0	0/1:15,11:26:6.81:221,0,7	0/0:22,0:20:28.62:0,29,541	0/0:24,0:24:24.19:0,24,727	0/0:19,0:18:12.04:0,12,631	0/0:27,0:26:26.94:0,27,1124	0/0:20,0:20:21.07:0,21,1248	0/0:12,0:15:9.03:0,9,213	0/0:24,0:30:18.06:0,18,771	0/0:20,0:22:20.29:0,20,339	0/0:16,0:16:14.08:0,14,372	0/0:16,0:24:15.03:0,15,345	0/0:9,0:8:21.07:0,21,696
chr10	5110646	.	A	AC	3197.67	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-8.863;DP=689;FS=12.399;HRun=0;HaplotypeScore=64.8464;InbreedingCoeff=0.9995;MQ=76.56;MQ0=0;MQRankSum=-1.342;QD=43.80;ReadPosRankSum=0.988;VQSLOD=3.1580;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,123,1720	0/0:9,0:9:27.09:0,27,378	0/0:13,0:13:38.54:0,39,414	0/0:15,0:15:45.07:0,45,539	0/0:30,0:30:90.29:0,90,1242	0/0:21,0:21:57.18:0,57,782	0/0:31,0:31:90.29:0,90,1241	0/0:25,0:25:69.22:0,69,934	0/0:31,0:31:93.31:0,93,1299	0/0:31,0:31:93.30:0,93,1286	0/0:13,0:13:39.13:0,39,545	0/0:34,0:34:99:0,102,1410	0/0:24,0:24:72.24:0,72,1005	0/0:27,0:27:81.26:0,81,1115	0/0:30,0:30:90.30:0,90,1256	0/0:31,0:31:93.31:0,93,1301	0/0:24,0:24:69.23:0,69,965	0/0:26,0:26:78.26:0,78,1091	0/0:18,0:18:54.17:0,54,740	0/0:28,0:28:78.26:0,78,1091	0/0:26,0:26:78.25:0,78,1072	0/0:18,0:18:51.16:0,51,696	0/0:13,0:13:36.12:0,36,502	0/0:27,0:27:81.27:0,81,1133	0/0:30,0:30:84.27:0,84,1157	1/1:0,32:32:96.33:1535,96,0	1/1:0,26:27:72.24:1135,72,0	1/1:1,13:14:42.14:671,42,0
chr10	5111380	.	CAT	C	3757.14	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.644;DP=1281;FS=16.006;HRun=0;HaplotypeScore=183.0649;InbreedingCoeff=0.9641;MQ=66.88;MQ0=6;MQRankSum=-1.653;QD=35.78;ReadPosRankSum=0.865;VQSLOD=3.7388;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,108,2007	0/0:19,0:19:57.18:0,57,1107	0/0:49,0:31:6.11:0,6,863	0/0:64,0:46:37.66:0,38,1203	0/0:29,0:29:84.24:0,84,1581	0/0:35,0:35:99:0,102,1834	0/0:43,0:43:99:0,126,2396	0/0:47,0:47:99:0,138,2536	0/0:64,0:64:99:0,181,3524	0/0:66,0:66:99:0,199,3839	0/0:26,0:26:75.24:0,75,1460	0/0:87,0:87:99:0,247,4730	0/0:53,0:53:99:0,153,3024	0/0:56,0:56:99:0,169,3241	0/0:65,0:65:99:0,190,3679	0/0:46,0:46:99:0,135,2558	0/0:24,0:24:66.20:0,66,1266	0/0:30,0:30:90.28:0,90,1753	0/0:29,0:29:78.66:0,79,1622	0/0:45,0:45:99:0,132,2513	0/0:82,0:82:99:0,235,4563	0/0:44,0:44:99:0,132,2449	0/0:39,0:39:99:0,114,2186	0/0:63,0:63:99:0,162,3136	0/0:25,0:25:72.22:0,72,1389	1/1:1,47:48:71.52:2015,72,0	1/1:0,38:38:78.27:1255,78,0	1/1:1,18:18:30.10:487,30,0
chr10	5111500	.	AGT	A	1394.72	PASS	AB=0.940;AC=18;AF=0.333;AN=54;BaseQRankSum=4.946;DP=1018;FS=8.196;HRun=0;HaplotypeScore=160.5363;InbreedingCoeff=0.0623;MQ=57.16;MQ0=12;MQRankSum=-0.284;QD=2.44;ReadPosRankSum=3.233;VQSLOD=2.1555;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:50:45.80:0,46,366	0/0:22,0:22:24.02:0,24,297	./.	0/0:38,0:17:3.01:0,3,42	0/1:19,0:19:2.32:2,0,250	0/1:23,0:24:50.02:50,0,397	0/1:27,5:32:12.40:12,0,652	0/0:40,0:40:17.98:0,18,179	0/1:33,5:39:9.54:10,0,662	0/1:46,3:49:1.61:2,0,726	0/0:17,0:17:19.23:0,19,285	0/1:52,1:53:2.39:2,0,1120	0/0:23,2:25:14.85:0,15,599	0/1:33,4:37:27.61:28,0,827	1/1:20,16:39:47.79:487,48,0	0/0:40,0:40:38.88:0,39,316	0/0:32,0:32:54.33:0,54,450	1/1:7,13:21:32.90:347,33,0	0/1:43,0:42:29.49:29,0,264	0/1:23,2:25:65.39:65,0,329	0/1:72,0:72:4.04:4,0,1034	0/0:36,2:38:69.20:0,69,992	0/1:20,2:22:34.37:34,0,273	0/1:49,10:60:39.99:40,0,918	1/1:16,17:34:41.94:446,42,0	0/0:7,0:44:41.68:0,42,281	0/0:26,0:34:14.53:0,15,139	0/0:16,0:16:14.78:0,15,163
chr10	5111507	.	G	GTA	4807.23	PASS	AB=0.895;AC=16;AF=0.286;AN=56;BaseQRankSum=0.980;DP=1008;FS=20.883;HRun=0;HaplotypeScore=147.1023;InbreedingCoeff=0.6765;MQ=55.90;MQ0=14;MQRankSum=1.214;QD=13.85;ReadPosRankSum=3.457;VQSLOD=3.4667;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:14,37:51:8.15:615,0,8	0/0:22,0:22:44.82:0,45,468	0/0:40,0:13:25:0,25,262	0/0:42,0:12:32.81:0,33,332	0/0:15,0:15:42.01:0,42,466	0/0:25,0:25:39.43:0,39,614	0/0:34,0:34:64.69:0,65,926	1/1:5,32:38:59.42:730,59,0	0/0:39,0:39:65.80:0,66,992	0/0:47,0:47:99:0,129,1408	0/0:17,0:17:26.41:0,26,441	0/0:50,0:50:99:0,115,1596	0/0:27,0:27:72.05:0,72,856	0/0:38,0:38:99:0,105,1232	1/1:38,0:38:30.85:394,31,0	1/1:3,37:40:28.50:677,28,0	1/1:7,30:37:21.84:832,22,0	0/1:25,0:25:21.62:155,0,22	0/0:38,0:36:79.52:0,80,823	0/0:22,0:22:55.47:0,55,611	0/0:82,0:81:99:0,177,2019	0/0:39,0:39:93.13:0,93,1169	0/0:23,0:23:45.45:0,45,478	0/0:61,0:61:99:0,117,1477	1/1:35,0:35:10.68:354,11,0	0/1:35,0:34:53.47:328,0,53	1/1:32,0:32:68.44:517,68,0	0/1:16,0:16:5.53:205,0,6
chr10	5112321	.	T	TC	2095.24	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-9.738;DP=691;FS=0.000;HRun=7;HaplotypeScore=78.0694;InbreedingCoeff=0.9912;MQ=79.04;MQ0=0;MQRankSum=0.109;QD=24.08;ReadPosRankSum=2.420;VQSLOD=3.9494;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,108,1022	0/0:8,0:8:15.02:0,15,145	0/0:31,0:30:44.42:0,44,604	0/0:29,0:27:35.23:0,35,298	0/0:17,0:17:36.04:0,36,347	0/0:16,0:16:48.07:0,48,458	0/0:33,0:33:81.07:0,81,769	0/0:32,0:32:62.67:0,63,586	0/0:26,0:26:66.10:0,66,637	0/0:29,0:29:75.12:0,75,724	0/0:11,0:11:18.02:0,18,174	0/0:25,0:25:60.06:0,60,571	0/0:28,0:28:81.13:0,81,782	0/0:22,0:22:63.10:0,63,608	1/1:9,16:25:48.14:572,48,0	0/0:15,0:15:42.06:0,42,405	0/0:50,0:50:99:0,126,1209	1/1:1,28:29:69.21:833,69,0	0/0:14,0:14:39.05:0,39,372	0/0:15,0:15:42.06:0,42,405	0/0:32,0:32:90.14:0,90,869	0/0:20,0:20:42.04:0,42,400	0/0:16,0:16:36:0,36,338	0/0:28,0:28:66.09:0,66,631	1/1:2,31:33:69.21:833,69,0	0/0:17,0:17:45.07:0,45,434	0/0:17,0:16:51.08:0,51,490	0/0:30,0:30:69.08:0,69,664
chr10	5114596	.	G	GT	536.27	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-4.764;DP=647;FS=10.881;HRun=9;HaplotypeScore=64.2288;InbreedingCoeff=0.9198;MQ=69.88;MQ0=0;MQRankSum=0.890;QD=21.45;ReadPosRankSum=-4.243;VQSLOD=2.1136;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:44:99:0,114,927	0/0:12,0:12:29.96:0,30,256	0/0:16,0:13:9.45:0,9,93	0/0:10,0:8:11.96:0,12,96	0/0:32,0:32:83.61:0,84,701	0/0:29,0:29:74.95:0,75,647	0/0:27,0:27:68.96:0,69,599	1/1:5,20:25:60.11:631,60,0	0/0:37,2:39:65.79:0,66,800	0/0:23,0:23:59.98:0,60,519	0/0:13,0:13:38.99:0,39,339	0/0:28,0:29:72.52:0,73,619	0/0:27,0:27:74.98:0,75,651	0/0:18,0:18:50.97:0,51,439	0/0:23,0:23:62.97:0,63,543	0/0:20,0:20:53.94:0,54,459	0/0:29,0:29:77.96:0,78,674	0/0:22,0:22:59.98:0,60,521	0/0:15,0:14:23.99:0,24,208	0/0:18,0:18:47.96:0,48,413	0/0:22,0:22:65.97:0,66,569	0/0:21,0:21:59.97:0,60,516	0/0:20,0:20:47.97:0,48,417	0/0:18,0:18:50.97:0,51,438	0/0:19,0:19:47.78:0,48,403	0/0:23,0:22:60.83:0,61,514	0/0:33,0:33:92.97:0,93,803	0/0:20,0:20:56.98:0,57,494
chr10	5114790	.	T	TA	7012.07	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-13.016;DP=578;FS=0.342;HRun=1;HaplotypeScore=63.5960;InbreedingCoeff=0.9992;MQ=73.45;MQ0=1;MQRankSum=0.724;QD=37.30;ReadPosRankSum=3.623;VQSLOD=5.2263;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,28:29:72.24:1066,72,0	0/0:9,0:9:27.05:0,27,321	0/0:25,0:23:36.60:0,37,455	0/0:31,0:24:23.44:0,23,515	0/0:20,0:19:60.18:0,60,761	0/0:17,0:17:51.17:0,51,662	0/0:22,0:22:60.08:0,60,726	0/0:20,0:20:54.15:0,54,664	0/0:21,0:21:57.16:0,57,709	0/0:25,0:25:72.20:0,72,889	0/0:16,0:16:48.16:0,48,621	0/0:21,0:21:57.18:0,57,739	0/0:18,0:18:54.11:0,54,679	0/0:18,0:18:51.15:0,51,647	1/1:0,23:23:60.18:898,60,0	1/1:0,21:21:60.20:898,60,0	1/1:1,23:23:51.17:764,51,0	1/1:0,14:14:33.11:494,33,0	0/0:12,0:11:27.09:0,27,346	0/0:16,0:16:48.13:0,48,595	0/0:49,0:49:99:0,141,1709	0/0:16,0:16:48.15:0,48,604	0/0:14,0:14:42.08:0,42,520	0/0:18,0:18:54.15:0,54,685	1/1:0,14:14:36.12:539,36,0	1/1:5,24:30:42.33:1075,42,0	1/1:0,20:20:54.14:783,54,0	1/1:0,13:13:33.11:494,33,0
chr10	5115436	.	G	GCACA	2177.33	PASS	AB=0.958;AC=12;AF=0.222;AN=54;BaseQRankSum=12.592;DP=521;FS=2.197;HRun=0;HaplotypeScore=113.4546;InbreedingCoeff=0.1444;MQ=56.76;MQ0=7;MQRankSum=-7.214;QD=12.30;ReadPosRankSum=2.081;VQSLOD=3.4694;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:23:8.58:9,0,83	0/0:6,0:6:15.05:0,15,269	./.	0/1:8,0:3:9.02:9,0,23	0/0:19,0:19:45.15:0,45,789	0/0:17,0:16:42.12:0,42,748	0/0:37,0:37:99:0,111,1909	0/0:18,0:17:36.08:0,36,637	0/0:11,0:11:33.10:0,33,569	0/0:19,0:19:54.18:0,54,1038	0/0:9,0:9:27.09:0,27,464	0/0:12,0:12:36.12:0,36,717	0/0:7,0:7:21.06:0,21,357	0/0:22,0:22:60.09:0,60,1014	0/1:10,0:10:13.95:64,0,14	0/1:11,0:11:40.19:40,0,98	0/1:37,0:39:99:157,0,120	0/1:35,0:35:27.46:481,0,27	0/0:15,0:13:25.48:0,25,479	0/0:9,0:9:27.08:0,27,481	0/0:63,0:62:99:0,162,2998	0/0:23,0:22:63.20:0,63,1155	0/0:18,0:18:48.15:0,48,849	0/0:34,0:34:96.32:0,96,1753	0/1:20,0:20:31.72:168,0,32	0/1:9,6:15:38.09:630,0,38	1/1:5,5:11:33.10:600,33,0	1/1:4,1:4:9.50:178,10,0
chr10	5115438	.	G	GCACA	4509.65	PASS	AB=0.867;AC=17;AF=0.315;AN=54;BaseQRankSum=8.799;DP=531;FS=0.455;HRun=0;HaplotypeScore=108.6623;InbreedingCoeff=0.8150;MQ=56.12;MQ0=8;MQRankSum=-7.929;QD=24.51;ReadPosRankSum=0.840;VQSLOD=4.7554;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:8,16:24:0:0,0,0	0/0:7,0:7:12.03:0,12,174	./.	0/1:10,0:4:1.94:2,0,20	0/0:16,0:16:36.12:0,36,595	0/0:18,0:17:45.09:0,45,684	0/0:38,0:38:93.19:0,93,1478	0/0:18,0:17:39.02:0,39,535	0/0:11,0:11:33.11:0,33,536	0/0:19,0:19:51.16:0,51,831	0/0:9,0:9:24.08:0,24,376	0/0:14,0:14:36.11:0,36,597	0/0:7,0:7:21.07:0,21,349	0/0:22,0:22:54.04:0,54,821	1/1:6,3:9:11.05:175,11,0	1/1:6,4:11:17.82:232,18,0	1/1:9,27:37:21.94:384,22,0	1/1:33,6:39:89.67:1658,90,0	0/0:16,0:13:26.99:0,27,343	0/0:9,0:9:24.08:0,24,397	0/0:64,0:63:99:0,153,2377	0/0:23,0:22:54.17:0,54,906	0/0:18,0:18:51.04:0,51,752	0/0:33,0:33:96.28:0,96,1516	1/1:15,5:20:25.71:552,26,0	0/1:15,0:15:16.80:651,0,17	1/1:9,0:11:33.11:600,33,0	1/1:8,0:7:15.05:256,15,0
chr10	5115452	.	A	ACACG	2349.13	PASS	AB=0.794;AC=14;AF=0.250;AN=56;BaseQRankSum=7.717;DP=541;FS=3.463;HRun=0;HaplotypeScore=121.5080;InbreedingCoeff=0.6555;MQ=52.19;MQ0=8;MQRankSum=-5.808;QD=13.42;ReadPosRankSum=-1.537;VQSLOD=2.8688;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:22:11.52:73,12,0	0/0:6,0:6:15:0,15,170	0/0:7,0:1:2.98:0,3,22	0/0:7,0:2:2.92:0,3,17	0/0:14,0:14:24.08:0,24,384	0/0:17,0:16:36.10:0,36,534	0/0:35,0:35:54.16:0,54,816	0/0:21,0:20:12.04:0,12,194	0/0:13,0:13:33.11:0,33,533	0/0:21,0:21:42.08:0,42,569	0/0:8,0:8:24.08:0,24,387	0/0:15,0:15:33.10:0,33,502	0/0:8,0:8:14.31:0,14,241	0/0:18,0:18:30.05:0,30,427	1/1:4,4:8:5.05:77,5,0	0/0:10,0:10:1.29:0,1,5	0/1:32,1:35:49.94:144,0,50	1/1:26,13:41:35.67:628,36,0	0/0:18,0:15:8.95:0,9,89	0/0:8,0:8:12.04:0,12,194	0/0:65,0:64:98.97:0,99,1459	0/0:22,0:21:39.13:0,39,626	0/0:19,0:19:36.11:0,36,556	0/0:33,0:34:30.11:0,30,776	1/1:18,5:24:6.49:311,6,0	0/1:10,9:20:8.85:559,0,9	1/1:6,6:12:24.08:566,24,0	1/1:4,9:12:9.01:166,9,0
chr10	5117295	.	T	TA	4729.26	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-3.990;DP=566;FS=0.753;HRun=9;HaplotypeScore=59.4765;InbreedingCoeff=0.9960;MQ=69.03;MQ0=0;MQRankSum=-1.221;QD=25.16;ReadPosRankSum=-0.916;VQSLOD=5.1508;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,32:38:29.07:760,29,0	0/0:8,0:8:24:0,24,208	0/0:15,0:16:17.84:0,18,195	0/0:17,0:16:31.87:0,32,264	0/0:20,0:20:53.98:0,54,469	0/0:24,0:24:65.96:0,66,568	0/0:18,0:18:44.99:0,45,391	1/1:3,25:28:75.20:830,75,0	0/0:15,0:15:41.99:0,42,365	0/0:29,0:29:71.97:0,72,623	0/0:18,0:18:47.99:0,48,417	0/0:26,1:27:44.80:0,45,618	0/0:21,0:21:59.99:0,60,521	0/0:6,0:6:18:0,18,156	1/1:6,26:32:60.16:664,60,0	1/1:0,13:13:36.10:398,36,0	1/1:3,33:37:87.07:944,87,0	1/1:1,15:16:42.11:462,42,0	0/0:13,0:13:26.96:0,27,228	0/0:18,0:20:49.01:0,49,395	0/0:16,0:16:47.18:0,47,384	0/0:21,0:21:56.90:0,57,486	0/0:23,0:23:65.85:0,66,560	0/0:14,0:14:32.98:0,33,283	1/1:3,21:24:49.46:672,49,0	0/0:22,0:22:62.99:0,63,547	0/0:20,0:20:41.93:0,42,360	0/0:10,0:10:29.99:0,30,260
chr10	5117623	.	TAC	T	2211.23	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.410;DP=865;FS=8.863;HRun=0;HaplotypeScore=172.1971;InbreedingCoeff=0.8974;MQ=57.50;MQ0=9;MQRankSum=-2.679;QD=28.72;ReadPosRankSum=-0.105;VQSLOD=4.3725;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:23.91:0,24,190	0/0:6,0:6:10.28:0,10,150	0/0:47,0:23:41.40:0,41,609	0/0:71,0:45:99:0,103,1360	0/0:27,0:27:75.24:0,75,1210	0/0:23,0:23:63.18:0,63,995	0/0:24,0:24:54.17:0,54,872	0/0:38,0:38:53.70:0,54,430	0/0:39,1:40:61.15:0,61,1563	0/0:30,0:30:78.26:0,78,1271	0/0:26,0:26:57.19:0,57,929	0/0:44,0:44:99:0,126,2038	0/0:30,0:30:77.57:0,78,1177	0/0:32,0:32:87.28:0,87,1416	0/0:31,0:31:32.87:0,33,314	0/0:28,0:28:26.36:0,26,308	0/0:15,0:15:5.94:0,6,42	0/0:15,0:15:20.40:0,20,174	0/0:21,0:21:4.42:0,4,547	0/0:30,0:30:81.28:0,81,1333	0/0:46,0:46:99:0,126,2077	0/0:36,0:36:81.28:0,81,1350	0/0:25,0:25:72.25:0,72,1185	0/0:46,0:46:99:0,117,1892	0/0:18,0:18:15.91:0,16,217	1/1:6,25:31:33.03:914,33,0	1/1:7,27:32:84:1057,84,0	1/1:2,10:12:30.10:382,30,0
chr10	5117635	.	C	CACACAG	6863.64	PASS	AB=0.581;AC=13;AF=0.232;AN=56;BaseQRankSum=11.678;DP=818;FS=1.826;HRun=0;HaplotypeScore=223.2310;InbreedingCoeff=0.8849;MQ=54.89;MQ0=8;MQRankSum=-13.250;QD=38.56;ReadPosRankSum=-5.772;VQSLOD=3.4613;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,2:36:35.93:937,36,0	0/0:6,0:6:14.97:0,15,258	0/0:41,0:20:54.08:0,54,938	0/0:57,0:40:70.48:0,70,1767	0/0:27,0:27:77.26:0,77,1692	0/0:21,0:21:63.18:0,63,1423	0/0:22,0:22:60.16:0,60,1285	1/1:35,0:35:62.89:1054,63,0	0/0:36,0:36:99:0,108,2412	0/0:30,0:30:89.96:0,90,1842	0/0:21,0:21:57.18:0,57,1208	0/0:44,0:44:99:0,129,2978	0/0:27,0:27:81.19:0,81,1653	0/0:31,0:31:93.25:0,93,2039	1/1:12,14:31:8.65:1706,9,0	1/1:8,16:27:25.63:1573,26,0	1/1:6,1:17:14.96:234,15,0	1/1:4,9:14:24.08:687,24,0	0/0:19,0:19:53.33:0,53,973	0/0:28,0:28:84.25:0,84,1910	0/0:51,0:51:99:0,150,3096	0/0:33,0:33:93.25:0,93,2001	0/0:25,0:25:75.21:0,75,1662	0/0:46,0:46:99:0,126,2627	0/1:5,10:17:13.21:674,0,13	0/0:32,0:32:91.29:0,91,1274	0/0:30,0:28:82.08:0,82,1245	0/0:12,0:12:33.07:0,33,514
chr10	5117639	.	AATCATC	A	2466.68	PASS	AB=0.908;AC=6;AF=0.107;AN=56;BaseQRankSum=7.872;DP=796;FS=11.466;HRun=0;HaplotypeScore=216.8880;InbreedingCoeff=0.7321;MQ=54.18;MQ0=10;MQRankSum=-4.375;QD=28.35;ReadPosRankSum=0.533;VQSLOD=2.0538;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:16.11:0,16,348	0/0:5,0:5:15.05:0,15,465	0/0:36,0:17:20.95:0,21,386	0/0:51,0:34:34.01:0,34,761	0/0:26,0:26:57.20:0,57,1641	0/0:21,0:21:57.18:0,57,1582	0/0:22,0:22:48.12:0,48,1020	0/0:29,0:29:32.87:0,33,629	0/0:37,0:37:81.25:0,81,2120	0/0:31,0:31:72.25:0,72,1901	0/0:19,0:19:39.12:0,39,1006	0/0:46,0:46:99:0,105,2739	0/0:26,0:26:54.17:0,54,1539	0/0:31,0:31:66.20:0,66,1621	0/0:32,0:32:20.72:0,21,251	0/0:21,0:26:27.09:0,27,425	0/1:12,0:12:0:0,0,0	0/0:16,0:16:18.06:0,18,478	0/0:21,0:21:39.05:0,39,770	0/0:28,0:28:59.21:0,59,1304	0/0:51,0:51:99:0,120,3193	0/0:37,0:37:75.26:0,75,2163	0/0:23,0:23:51.16:0,51,1342	0/0:44,0:44:99:0,113,3231	0/0:20,0:19:18.06:0,18,405	0/1:24,7:31:39.14:990,0,39	1/1:17,15:31:72.18:1290,72,0	1/1:8,4:12:18.03:314,18,0
chr10	5118043	.	TGATA	T	1034.72	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.510;DP=733;FS=0.816;HRun=0;HaplotypeScore=138.6560;InbreedingCoeff=0.9910;MQ=63.92;MQ0=1;MQRankSum=-5.921;QD=31.36;ReadPosRankSum=-4.199;VQSLOD=2.8907;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:84.26:0,84,2123	0/0:14,0:14:39.13:0,39,934	0/0:31,0:23:51.17:0,51,1145	0/0:31,0:22:31.75:0,32,695	0/0:29,0:28:72.25:0,72,1786	0/0:26,0:26:75.26:0,75,1856	0/0:21,0:21:45.13:0,45,1069	1/1:13,20:33:66.22:1130,66,0	0/0:22,0:22:51.16:0,51,1249	0/0:29,0:29:78.27:0,78,1966	0/0:29,0:29:81.28:0,81,2019	0/0:33,0:33:87.28:0,87,2140	0/0:18,0:18:42.14:0,42,1040	0/0:19,0:19:51.18:0,51,1273	0/0:20,0:20:42.03:0,42,1069	0/0:19,0:19:41.97:0,42,980	0/0:17,0:17:30.34:0,30,648	0/0:24,0:24:56.98:0,57,1310	0/0:34,0:34:93.31:0,93,2250	0/0:35,0:35:96.33:0,96,2383	0/0:12,0:12:18.06:0,18,459	0/0:30,0:30:78.27:0,78,1905	0/0:23,0:23:60.21:0,60,1501	0/0:18,0:18:39.13:0,39,961	0/0:31,0:31:57.14:0,57,1281	0/0:42,0:42:99:0,102,2520	0/0:21,0:21:48.16:0,48,1225	0/0:33,0:33:87.29:0,87,2187
chr10	5118066	.	A	AATAGATAGATAG	3423.73	PASS	AB=0.806;AC=15;AF=0.288;AN=52;BaseQRankSum=-0.547;DP=737;FS=8.131;HRun=0;HaplotypeScore=241.6623;InbreedingCoeff=0.5946;MQ=56.37;MQ0=8;MQRankSum=-7.104;QD=12.01;ReadPosRankSum=-4.645;VQSLOD=0.6470;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:43:18.06:501,18,0	0/0:10,0:10:9.03:0,9,306	./.	./.	0/0:26,0:24:39.13:0,39,1084	0/0:24,0:24:30.10:0,30,826	0/0:16,0:16:21.07:0,21,579	1/1:43,0:60:66.18:1009,66,0	0/1:20,2:22:75.51:76,0,633	0/0:28,0:28:45.15:0,45,1217	0/0:24,0:24:27.09:0,27,742	0/0:31,0:31:48.16:0,48,1458	0/0:17,0:17:36.12:0,36,1073	0/0:25,0:25:66.21:0,66,1819	1/1:15,0:25:26.92:725,27,0	1/1:10,11:25:3.01:173,3,0	1/1:12,0:19:6.49:139,6,0	0/1:13,0:21:19.98:336,0,20	0/0:35,0:35:48.15:0,48,1245	0/0:30,0:30:36.10:0,36,865	0/0:6,0:10:4.54:0,5,27	0/0:26,0:26:30.09:0,30,774	0/0:22,0:22:27.08:0,27,696	0/0:20,0:20:3.21:0,3,968	1/1:12,17:33:9.03:293,9,0	0/0:35,0:35:59.73:0,60,1538	0/0:15,0:15:33.03:0,33,838	0/1:25,0:34:24.48:173,0,24
chr10	5121861	.	TG	T	628.54	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.843;DP=578;FS=1.317;HRun=9;HaplotypeScore=58.1998;InbreedingCoeff=0.5643;MQ=78.75;MQ0=0;MQRankSum=-0.042;QD=20.28;ReadPosRankSum=-1.422;VQSLOD=3.7167;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,102,1164	0/0:4,0:4:6.02:0,6,69	0/0:24,0:24:24.72:0,25,361	0/0:19,0:19:2.14:0,2,281	0/0:18,1:20:29.50:0,30,546	0/0:22,0:22:60.18:0,60,692	0/0:26,2:28:17.74:0,18,696	1/1:3,28:31:80.87:723,81,0	0/0:12,1:13:5.63:0,6,318	0/0:22,0:22:45.13:0,45,516	0/0:17,1:18:23.69:0,24,526	0/0:15,0:15:39.11:0,39,442	0/0:23,0:23:63.19:0,63,727	0/0:19,0:19:54.13:0,54,603	0/0:12,0:12:33.10:0,33,381	0/0:19,0:19:42.12:0,42,485	0/0:17,0:17:42.12:0,42,485	0/0:21,0:21:54.15:0,54,613	0/0:22,1:23:2.43:0,2,524	0/0:26,1:27:38.73:0,39,699	0/0:30,0:30:78.06:0,78,880	0/0:19,1:20:26.70:0,27,558	0/0:20,0:20:57.14:0,57,637	0/0:25,0:25:57.16:0,57,649	0/0:19,0:19:51.15:0,51,585	0/0:17,0:17:42.12:0,42,480	0/0:25,0:25:66.16:0,66,735	0/0:6,0:6:6.02:0,6,69
chr10	5124475	.	G	GA	10782.21	PASS	AB=0.535;AC=19;AF=0.339;AN=56;BaseQRankSum=-16.595;DP=639;FS=0.300;HRun=0;HaplotypeScore=60.7304;InbreedingCoeff=0.9198;MQ=83.68;MQ0=0;MQRankSum=-3.197;QD=42.62;ReadPosRankSum=3.224;VQSLOD=5.4142;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,43:44:99:1898,120,0	0/0:9,0:9:27.09:0,27,373	0/0:19,0:19:53.94:0,54,690	0/0:18,0:18:51:0,51,626	0/0:18,0:18:54.18:0,54,755	0/0:13,0:13:30.10:0,30,419	0/0:32,0:32:93.31:0,93,1299	1/1:2,17:19:51.17:803,51,0	0/0:20,0:20:57.17:0,57,776	0/0:15,0:15:45.13:0,45,609	0/0:8,0:8:21.07:0,21,292	0/0:40,0:40:99:0,111,1524	0/0:25,0:25:75.22:0,75,996	0/0:21,0:21:63.20:0,63,863	1/1:0,23:23:63.21:1007,63,0	1/1:0,23:23:63.21:1004,63,0	1/1:0,45:45:99:2012,126,0	1/1:0,32:32:93.32:1487,93,0	0/0:20,0:20:60.18:0,60,802	0/0:12,0:12:36.12:0,36,496	0/0:63,0:63:99:0,184,2531	0/0:14,0:14:42.14:0,42,585	0/0:15,0:15:42.14:0,42,587	0/0:24,0:24:72.24:0,72,1004	1/1:0,19:19:45.15:719,45,0	0/1:3,20:23:20.73:823,0,21	1/1:1,15:15:42.12:646,42,0	1/1:0,9:9:24.08:384,24,0
chr10	5125946	.	TCGGC	T	1623.40	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=8.497;DP=632;FS=3.479;HRun=0;HaplotypeScore=105.4635;InbreedingCoeff=0.9701;MQ=87.15;MQ0=0;MQRankSum=-5.476;QD=52.37;ReadPosRankSum=2.249;VQSLOD=4.8788;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,31:31:87.21:1718,87,0	0/0:4,0:4:12.02:0,12,285	0/0:18,0:18:51.16:0,51,1311	0/0:25,0:25:72.24:0,72,1739	0/0:23,0:23:69.24:0,69,1998	0/0:17,0:17:51.17:0,51,1411	0/0:28,0:28:84.27:0,84,2314	0/0:28,0:28:81.28:0,81,2266	0/0:17,0:17:51.16:0,51,1242	0/0:18,0:18:54.18:0,54,1479	0/0:14,0:14:42.14:0,42,1124	0/0:28,0:28:81.28:0,81,2325	0/0:14,0:14:39.13:0,39,1127	0/0:27,0:27:81.23:0,81,2178	0/0:25,0:25:75.24:0,75,2067	0/0:16,0:16:48.16:0,48,1341	0/0:29,0:29:87.27:0,87,2324	0/0:29,0:29:87.28:0,87,2347	0/0:22,0:22:66.21:0,66,1754	0/0:22,0:22:66.21:0,66,1828	0/0:44,0:44:99:0,132,3690	0/0:25,0:25:75.26:0,75,2086	0/0:20,0:20:60.21:0,60,1677	0/0:24,0:24:72.25:0,72,2037	0/0:23,0:23:69.21:0,69,1845	0/0:20,0:20:60.21:0,60,1685	0/0:18,0:18:54.19:0,54,1554	0/0:23,0:23:69.24:0,69,1997
chr10	5128188	.	C	CA	3220.76	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=0.206;DP=727;FS=4.945;HRun=0;HaplotypeScore=74.5027;InbreedingCoeff=0.9997;MQ=73.06;MQ0=0;MQRankSum=-1.322;QD=41.83;ReadPosRankSum=-0.689;VQSLOD=3.9467;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,108,1486	0/0:16,0:16:48.16:0,48,668	0/0:21,0:21:47.77:0,48,584	0/0:14,0:13:36.11:0,36,453	0/0:27,0:27:75.14:0,75,1009	0/0:34,0:34:99:0,102,1399	0/0:38,0:38:99:0,114,1573	1/1:1,23:24:69.23:1080,69,0	0/0:23,0:23:60.18:0,60,792	0/0:39,0:39:99:0,108,1445	0/0:15,0:15:45.14:0,45,611	0/0:37,0:37:99:0,111,1521	0/0:25,0:25:69.20:0,69,928	0/0:23,0:23:63.20:0,63,862	0/0:24,0:24:69.23:0,69,960	0/0:33,0:33:92.80:0,93,1214	0/0:23,0:23:63.21:0,63,876	0/0:25,0:25:75.21:0,75,1024	0/0:20,0:20:54.18:0,54,752	0/0:28,0:28:81.22:0,81,1106	0/0:40,0:40:99:0,114,1584	0/0:26,0:26:75.17:0,75,959	0/0:15,0:15:45.10:0,45,601	0/0:31,0:31:87.25:0,87,1192	0/0:36,0:36:99:0,105,1411	1/1:2,28:30:45.49:1295,45,0	1/1:0,12:12:33.11:527,33,0	1/1:1,10:11:30.10:479,30,0
chr10	5128284	.	GACAC	G	1631.27	PASS	AB=0.790;AC=14;AF=0.269;AN=52;BaseQRankSum=4.298;DP=631;FS=3.115;HRun=0;HaplotypeScore=111.5830;InbreedingCoeff=0.3402;MQ=61.08;MQ0=12;MQRankSum=-2.075;QD=7.48;ReadPosRankSum=1.501;VQSLOD=2.1640;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:30:6:54,6,0	0/1:11,1:12:28.97:29,0,337	./.	./.	0/0:11,0:11:6:0,6,95	0/0:18,0:18:24.08:0,24,503	0/0:28,0:30:32.32:0,32,561	0/0:18,0:17:7.27:0,7,128	0/1:16,1:18:26.22:26,0,319	0/0:27,0:28:50.85:0,51,914	0/0:6,0:6:9.03:0,9,201	0/0:17,0:22:15.04:0,15,253	0/0:17,0:24:15.05:0,15,279	0/0:27,0:29:29.82:0,30,535	1/1:12,12:25:36.01:532,36,0	1/1:15,0:22:21.02:196,21,0	0/1:22,3:32:76.18:110,0,76	0/1:14,12:27:31.44:462,0,31	0/0:16,0:17:5.75:0,6,83	0/0:15,0:15:23.86:0,24,419	0/0:39,0:44:32.05:0,32,523	0/0:26,0:26:24.07:0,24,505	0/0:6,0:7:14.77:0,15,234	0/0:25,0:27:38.32:0,38,664	1/1:20,3:27:24.01:298,24,0	0/0:19,0:20:13.56:0,14,142	0/1:12,0:15:11.91:12,0,39	0/1:4,2:8:12.93:81,0,13
chr10	5130165	.	CTAT	C	59.02	PASS	AB=0.831;AC=3;AF=0.060;AN=50;BaseQRankSum=3.593;DP=273;FS=29.716;HRun=0;HaplotypeScore=51.9530;InbreedingCoeff=-0.0862;MQ=48.28;MQ0=33;MQRankSum=-1.430;QD=1.44;ReadPosRankSum=-1.867;VQSLOD=-0.4187;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:39.60:0,40,626	0/0:4,0:4:12.04:0,12,184	./.	./.	0/0:6,0:5:15.05:0,15,228	0/0:24,0:19:48.16:0,48,764	0/0:3,0:1:3.01:0,3,50	0/0:23,0:18:22.67:0,23,177	0/0:8,0:7:18.06:0,18,284	0/0:11,0:8:24.08:0,24,371	0/0:10,0:9:27.09:0,27,436	0/0:9,0:8:21.07:0,21,338	0/0:9,0:9:21.07:0,21,332	0/0:6,0:5:15.05:0,15,238	0/1:7,0:6:46.55:47,0,91	0/0:11,0:8:12.03:0,12,175	0/0:15,0:10:12.40:0,12,275	0/1:11,4:14:29.65:30,0,332	0/0:15,0:9:24.07:0,24,365	0/0:6,0:5:12.04:0,12,192	0/0:6,0:5:12.04:0,12,192	0/0:3,0:3:9.03:0,9,140	0/0:4,0:4:9.03:0,9,142	./.	0/1:11,8:18:80.76:81,0,366	0/0:14,0:11:33.11:0,33,532	0/0:7,0:6:18.06:0,18,292	0/0:17,0:14:36.12:0,36,585
chr10	5130213	.	CTA	C	1359.11	PASS	AC=4;AF=0.074;AN=54;BaseQRankSum=7.330;DP=334;FS=40.011;HRun=0;HaplotypeScore=52.8833;InbreedingCoeff=0.8324;MQ=63.61;MQ0=24;MQRankSum=0.353;QD=26.14;ReadPosRankSum=-1.588;VQSLOD=1.8599;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,18:18:20.63:300,21,0	0/0:6,0:6:18.06:0,18,318	0/0:5,0:3:9.03:0,9,141	0/0:13,0:7:4.96:0,5,92	0/0:10,0:9:27.09:0,27,485	0/0:25,0:20:54.19:0,54,970	0/0:12,0:10:30.10:0,30,515	1/1:6,28:32:67.22:1178,67,0	0/0:10,0:9:27.08:0,27,450	0/0:13,0:12:36.11:0,36,595	0/0:11,0:10:30.10:0,30,538	0/0:11,0:10:30.10:0,30,539	0/0:5,0:5:12.04:0,12,214	0/0:9,0:8:24.08:0,24,431	0/0:9,0:8:15.05:0,15,264	./.	0/0:19,0:17:36.07:0,36,647	0/0:13,0:12:25.02:0,25,429	0/0:24,0:13:36.09:0,36,614	0/0:8,0:7:18.06:0,18,318	0/0:8,0:7:15.05:0,15,264	0/0:4,0:4:12.04:0,12,215	0/0:5,0:5:12.04:0,12,215	0/0:5,0:5:12.04:0,12,209	0/0:15,0:14:21.06:0,21,343	0/0:11,0:8:24.08:0,24,428	0/0:11,0:10:24.08:0,24,422	0/0:13,0:13:30.10:0,30,525
chr10	5130324	.	GA	G	2165.66	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=8.137;DP=546;FS=21.231;HRun=7;HaplotypeScore=58.6865;InbreedingCoeff=0.9874;MQ=70.08;MQ0=2;MQRankSum=3.249;QD=24.06;ReadPosRankSum=1.593;VQSLOD=2.0727;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:48.07:0,48,568	0/0:11,0:11:27.09:0,27,340	0/0:10,0:10:21.06:0,21,254	0/0:7,0:7:15.01:0,15,189	0/0:20,0:20:51.16:0,51,640	0/0:25,0:25:72.19:0,72,888	0/0:23,0:23:57.17:0,57,704	0/0:26,0:26:66.17:0,66,811	0/0:17,0:17:42.13:0,42,517	0/0:30,0:30:81.26:0,81,1019	0/0:11,0:11:27.09:0,27,339	0/0:32,0:32:81.26:0,81,1019	0/0:16,0:16:45.13:0,45,554	0/0:17,0:17:48.14:0,48,590	1/1:3,10:13:27.05:275,27,0	0/0:18,0:17:42.13:0,42,528	1/1:3,31:34:87.20:888,87,0	1/1:0,27:27:72.16:735,72,0	0/0:22,0:22:63.20:0,63,792	0/0:11,0:11:24.08:0,24,302	0/0:52,0:52:99:0,141,1759	0/0:10,0:10:21.07:0,21,263	0/0:6,0:6:18.06:0,18,226	0/0:24,0:24:69.21:0,69,856	1/1:1,15:16:42.09:428,42,0	0/0:21,0:21:60.18:0,60,743	0/0:8,0:7:18.06:0,18,226	0/0:19,0:18:54.17:0,54,674
chr10	5130405	.	AGT	A	3026.69	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=11.982;DP=805;FS=7.177;HRun=0;HaplotypeScore=120.3667;InbreedingCoeff=0.9411;MQ=59.68;MQ0=8;MQRankSum=0.002;QD=21.62;ReadPosRankSum=-0.577;VQSLOD=3.9883;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,21:31:9:117,9,0	0/0:4,0:4:9.03:0,9,149	0/0:24,0:9:4.14:0,4,168	0/0:33,0:12:20.59:0,21,222	0/0:11,0:11:33.11:0,33,549	0/0:26,0:26:69.24:0,69,1157	0/0:43,0:43:93.79:0,94,1559	1/1:3,20:23:54.17:700,54,0	0/0:33,0:33:96.31:0,96,1554	0/0:32,0:32:93.32:0,93,1559	0/0:13,0:13:27.09:0,27,456	0/0:50,0:50:99:0,141,2360	0/0:25,0:25:72.25:0,72,1212	0/0:42,0:42:99:0,126,2108	0/0:34,0:34:84.29:0,84,1402	1/1:2,19:20:29.53:370,30,0	0/0:26,0:25:60.18:0,60,979	0/0:28,0:28:54.18:0,54,886	0/0:22,1:23:28.28:0,28,766	0/0:6,0:6:18.05:0,18,276	0/0:144,0:144:99:0,394,6555	0/0:7,0:7:15.05:0,15,255	0/0:12,0:12:30.10:0,30,506	0/0:31,0:31:78.27:0,78,1318	0/0:18,0:18:33.11:0,33,549	1/1:2,31:33:96.29:1228,96,0	1/1:4,18:21:39.55:486,40,0	1/1:2,8:9:24.08:309,24,0
chr10	5130445	.	A	AGT	6529.27	PASS	AB=0.657;AC=18;AF=0.321;AN=56;BaseQRankSum=0.594;DP=872;FS=6.882;HRun=0;HaplotypeScore=124.9232;InbreedingCoeff=0.8042;MQ=58.69;MQ0=14;MQRankSum=-3.652;QD=25.71;ReadPosRankSum=-1.247;VQSLOD=5.6853;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:35:14.88:129,15,0	0/0:4,0:4:9.03:0,9,112	0/0:52,0:20:42.05:0,42,471	0/0:58,0:19:25.75:0,26,302	0/0:10,0:10:27.08:0,27,335	0/0:26,0:26:66.21:0,66,818	0/0:35,1:36:35.06:0,35,955	0/1:24,10:32:9.03:924,0,9	0/0:33,0:33:93.29:0,93,1150	0/0:18,0:18:24.07:0,24,298	0/0:11,0:11:26.96:0,27,334	0/0:49,0:50:99:0,132,1586	0/0:29,0:29:75.23:0,75,929	0/0:47,0:47:99:0,111,1362	1/1:7,19:26:48.16:784,48,0	1/1:5,23:28:4.73:550,5,0	1/1:8,12:19:51.11:774,51,0	1/1:3,24:27:48.16:787,48,0	0/0:24,0:23:7.29:0,7,438	0/0:11,0:10:30.08:0,30,356	0/0:145,0:146:99:0,361,4362	0/0:10,0:10:27.08:0,27,335	0/0:11,0:11:23.59:0,24,297	0/0:42,0:42:99:0,105,1286	0/1:2,16:20:11.92:502,0,12	1/1:16,21:37:48.64:1243,49,0	1/1:5,9:15:30.07:442,30,0	1/1:3,9:12:24.08:393,24,0
chr10	5131241	.	C	CCCAGTA	2256.44	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=4.738;DP=804;FS=0.704;HRun=0;HaplotypeScore=171.0424;InbreedingCoeff=0.6963;MQ=87.40;MQ0=0;MQRankSum=-7.634;QD=33.18;ReadPosRankSum=-2.653;VQSLOD=2.7440;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:21,21:42:78.18:2350,78,0	0/0:12,0:12:36.12:0,36,799	0/0:34,0:34:49.35:0,49,1133	0/1:26,0:26:6.29:6,0,610	0/0:32,0:32:87.30:0,87,1899	0/0:23,0:23:63.20:0,63,1323	0/0:27,0:27:75.26:0,75,1653	0/0:31,0:31:72.24:0,72,1524	0/0:38,0:38:99:0,102,2205	0/0:34,0:34:87.27:0,87,1850	0/0:15,0:15:36.12:0,36,798	0/0:48,0:48:99:0,132,2839	0/0:24,0:24:63.20:0,63,1307	0/0:36,0:36:90.27:0,90,1890	0/0:38,0:38:99:0,111,2385	0/0:29,0:29:84.27:0,84,1821	0/0:37,0:37:93.32:0,93,2063	0/0:20,0:20:54.12:0,54,1085	0/0:27,0:27:69.22:0,69,1416	0/0:22,0:22:63.22:0,63,1398	0/0:62,0:62:99:0,169,3599	0/0:31,0:31:87.27:0,87,1847	0/0:20,0:20:60.18:0,60,1250	0/0:20,0:20:60.21:0,60,1313	0/0:25,0:25:66.23:0,66,1464	0/0:24,0:24:69.23:0,69,1467	0/0:15,0:15:39.13:0,39,844	0/0:12,0:12:36.12:0,36,799
chr10	5131272	.	G	GAAC	1827.08	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=9.431;DP=801;FS=0.657;HRun=0;HaplotypeScore=125.9464;InbreedingCoeff=0.9906;MQ=82.59;MQ0=0;MQRankSum=-6.166;QD=48.08;ReadPosRankSum=-1.729;VQSLOD=4.6120;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,31:38:93.10:1922,93,0	0/0:14,0:14:42.14:0,42,676	0/0:22,0:22:18.49:0,18,767	0/0:31,0:31:80.08:0,80,1134	0/0:28,0:28:84.27:0,84,1373	0/0:25,0:25:64.93:0,65,1045	0/0:27,0:27:72.23:0,72,1173	0/0:27,0:27:81.25:0,81,1297	0/0:37,0:37:99:0,108,1797	0/0:32,0:32:87.29:0,87,1399	0/0:14,0:14:42.14:0,42,699	0/0:51,0:51:99:0,150,2462	0/0:22,0:22:66.23:0,66,1099	0/0:41,0:41:99:0,114,1872	0/0:36,0:36:99:0,105,1722	0/0:29,0:29:78.27:0,78,1298	0/0:39,0:39:99:0,111,1817	0/0:15,0:15:42.14:0,42,696	0/0:29,0:29:84.24:0,84,1343	0/0:22,0:22:63.22:0,63,1047	0/0:61,0:61:99:0,181,2911	0/0:36,0:36:99:0,102,1673	0/0:17,0:17:51.17:0,51,845	0/0:29,0:29:81.28:0,81,1346	0/0:25,0:25:72.25:0,72,1197	0/0:31,0:31:87.26:0,87,1400	0/0:8,0:8:24.08:0,24,395	0/0:15,0:15:36.12:0,36,599
chr10	5131731	.	TTCTGTC	T	159.98	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.249;DP=744;FS=10.029;HRun=0;HaplotypeScore=143.3860;InbreedingCoeff=0.9722;MQ=61.89;MQ0=6;MQRankSum=-1.754;QD=8.42;ReadPosRankSum=-1.476;VQSLOD=1.8094;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:5,14:19:15.01:248,15,0	0/0:10,0:10:21.06:0,21,625	0/0:24,0:19:29.99:0,30,506	0/0:36,0:30:18.60:0,19,476	0/0:39,0:39:84.24:0,84,2415	0/0:25,0:25:60.01:0,60,1618	0/0:27,0:27:63.12:0,63,1521	0/0:38,0:38:69.19:0,69,1463	0/0:25,0:25:54.17:0,54,1465	0/0:49,0:49:99:0,114,3313	0/0:21,0:20:48.11:0,48,1208	0/0:23,0:23:45.14:0,45,1230	0/0:26,0:26:63.17:0,63,1627	0/0:18,0:18:39.11:0,39,975	0/0:36,0:36:90.23:0,90,2445	0/0:23,0:23:48.15:0,48,1352	0/0:28,0:28:72.18:0,72,2077	0/0:21,0:21:42.94:0,43,969	0/0:29,0:25:54.07:0,54,1291	0/0:21,0:21:48.14:0,48,1402	0/0:24,0:24:63.19:0,63,1663	0/0:39,0:39:96.27:0,96,2659	0/0:21,0:21:51.14:0,51,1278	0/0:23,0:23:54.12:0,54,1656	0/0:18,0:18:39.11:0,39,926	0/0:29,0:29:81.22:0,81,2287	0/0:29,0:28:63.15:0,63,1787	0/0:23,0:23:51.10:0,51,1186
chr10	5131877	.	GTC	G	590.57	PASS	AB=0.970;AC=23;AF=0.460;AN=50;BaseQRankSum=3.129;DP=655;FS=3.667;HRun=0;HaplotypeScore=102.0547;InbreedingCoeff=-0.2859;MQ=66.52;MQ0=15;MQRankSum=0.239;QD=1.26;ReadPosRankSum=1.675;VQSLOD=1.9281;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:24:3:0,3,25	0/0:14,0:14:6.78:0,7,43	./.	./.	0/1:26,0:26:15.42:15,0,109	0/1:18,1:19:37.88:38,0,83	0/1:26,0:25:24.29:24,0,228	0/0:30,0:30:6.02:0,6,69	0/1:17,0:28:4.54:5,0,79	0/1:33,1:33:15.40:15,0,189	0/0:17,0:16:7.56:0,8,73	0/1:22,5:26:12.94:13,0,199	0/1:20,1:20:43.15:43,0,156	0/0:21,0:20:14.81:0,15,157	0/1:27,3:30:19.03:147,0,19	./.	0/0:19,0:20:11.97:0,12,97	1/1:24,0:24:0.35:181,0,0	0/1:23,0:23:12.69:13,0,109	0/1:23,0:23:20.41:20,0,121	0/1:21,1:22:45.36:45,0,55	0/1:20,0:19:34.08:34,0,141	0/1:24,0:23:12.95:13,0,158	0/1:33,1:33:0.24:0,0,280	1/1:21,0:22:5.95:51,6,0	1/1:27,0:27:13.24:54,13,0	0/1:19,0:16:5.95:19,0,6	1/1:18,0:17:1.88:3,2,0
chr10	5132031	.	CCT	C	1444.66	PASS	AB=1.000;AC=10;AF=0.179;AN=56;BaseQRankSum=9.843;DP=1046;FS=0.000;HRun=0;HaplotypeScore=259.2329;InbreedingCoeff=0.2635;MQ=52.69;MQ0=18;MQRankSum=-8.289;QD=4.78;ReadPosRankSum=-5.307;VQSLOD=1.0490;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:17,12:24:20.14:149,20,0	0/0:12,0:12:27.09:0,27,451	0/0:35,0:11:15.47:0,15,167	0/0:49,0:26:22.10:0,22,285	0/0:35,0:35:99:0,99,1603	0/0:29,0:29:9.27:0,9,1113	0/0:28,0:28:69.35:0,69,1084	0/0:67,0:65:99:0,112,1515	0/0:34,2:35:58.12:0,58,1457	0/0:43,0:43:99:0,100,1635	0/0:27,0:27:60.04:0,60,962	0/0:37,0:37:84.29:0,84,1365	0/0:38,0:38:93.28:0,93,1447	0/0:28,0:28:51.17:0,51,829	0/1:61,0:58:99:147,0,668	1/1:31,28:59:99:1066,102,0	0/1:21,0:20:11.09:11,0,327	0/1:22,0:21:55.97:56,0,320	0/0:26,0:20:57.19:0,57,928	0/0:27,0:27:72.24:0,72,1174	0/0:71,0:70:99:0,166,2677	0/0:34,1:35:49.09:0,49,1303	0/0:28,0:28:34.90:0,35,1083	0/0:45,0:44:99:0,99,1589	0/1:31,0:31:69.32:69,0,349	0/1:50,0:49:28.05:28,0,674	0/0:48,0:48:64.93:0,65,740	0/1:29,0:29:73.83:74,0,442
chr10	5132039	.	T	TCCCCCTCC	6719.60	PASS	AB=0.842;AC=10;AF=0.179;AN=56;BaseQRankSum=9.027;DP=1045;FS=1.594;HRun=0;HaplotypeScore=359.7836;InbreedingCoeff=-0.2176;MQ=53.06;MQ0=13;MQRankSum=-11.367;QD=16.00;ReadPosRankSum=-6.559;VQSLOD=1.8333;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:25:58.83:87,0,59	0/0:12,0:12:36.11:0,36,900	0/0:22,0:7:20.64:0,21,389	0/0:42,0:23:48.05:0,48,869	0/0:38,0:38:99:0,111,2994	0/0:30,0:30:87.30:0,87,2315	0/0:27,0:27:78.72:0,79,2031	0/1:60,0:59:61.65:62,0,2289	0/0:40,0:39:99:0,111,2791	0/0:45,0:45:99:0,126,3220	0/0:27,0:27:75.19:0,75,1848	0/0:36,0:36:99:0,102,2547	0/0:39,0:39:99:0,111,2676	0/0:27,0:27:69.11:0,69,1602	0/1:46,2:56:99:687,0,1648	0/1:48,0:57:99:882,0,665	0/1:18,2:20:99:272,0,907	0/1:20,0:20:99:340,0,936	0/0:26,0:21:63.21:0,63,1694	0/0:27,0:27:81.24:0,81,2167	0/0:71,0:70:99:0,177,4738	0/0:40,0:40:99:0,117,2754	0/0:32,0:32:96.27:0,96,2320	0/0:43,0:42:99:0,105,2850	0/1:23,4:33:99:401,0,901	0/1:37,10:55:99:2608,0,1468	0/1:26,18:55:99:206,0,1687	0/1:18,6:28:99:1175,0,934
chr10	5132090	.	TAC	T	286.86	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.437;DP=1125;FS=9.621;HRun=0;HaplotypeScore=260.7803;InbreedingCoeff=0.9549;MQ=51.77;MQ0=13;MQRankSum=-0.862;QD=8.69;ReadPosRankSum=-2.312;VQSLOD=1.7167;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:16,17:30:29.74:381,30,0	0/0:14,0:14:39.12:0,39,610	0/0:45,0:16:10.69:0,11,515	0/0:34,0:21:28.78:0,29,534	0/0:44,0:44:99:0,114,1799	0/0:34,0:34:79.47:0,79,1242	0/0:32,1:33:42.66:0,43,1235	0/0:78,0:75:99:0,124,2158	0/0:47,0:47:99:0,126,2033	0/0:50,0:50:99:0,129,2132	0/0:27,0:27:78.26:0,78,1286	0/0:42,0:42:73.08:0,73,1717	0/0:31,0:31:81.26:0,81,1300	0/0:39,0:39:96.32:0,96,1594	0/0:52,1:50:84.26:0,84,1375	0/0:51,0:51:87.18:0,87,1358	0/0:31,1:30:62.79:0,63,1027	0/0:31,0:30:77.93:0,78,1214	0/0:34,0:29:69.08:0,69,984	0/0:22,0:22:57.15:0,57,908	0/0:78,2:78:82.60:0,83,2715	0/0:37,0:37:96.33:0,96,1576	0/0:24,1:25:21.29:0,21,913	0/0:44,0:44:67.32:0,67,1626	0/0:44,0:44:69.11:0,69,1105	0/0:54,0:53:99:0,138,2036	0/0:49,0:49:86.69:0,87,1325	0/0:17,0:17:26.68:0,27,395
chr10	5132148	.	TCA	T	585.78	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.270;DP=1065;FS=2.402;HRun=0;HaplotypeScore=228.1696;InbreedingCoeff=0.8809;MQ=57.71;MQ0=14;MQRankSum=-1.361;QD=20.20;ReadPosRankSum=-0.390;VQSLOD=3.6761;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:46:57.75:0,58,862	0/0:12,0:12:33.10:0,33,523	0/0:33,0:23:33.12:0,33,373	0/0:56,0:22:18.87:0,19,389	0/0:40,0:40:75.27:0,75,1395	0/0:21,0:21:45.11:0,45,710	0/0:35,0:34:37.37:0,37,1060	0/0:41,0:39:99:0,102,1550	0/0:43,0:43:99:0,105,1593	0/0:52,0:52:99:0,135,2209	0/0:28,0:27:72.06:0,72,1109	0/0:49,0:49:99:0,132,2084	0/0:40,0:40:99:0,111,1700	0/0:43,0:43:99:0,105,1644	0/0:52,0:52:43.75:0,44,1122	0/0:51,0:51:62.86:0,63,945	1/1:12,17:27:54.17:681,54,0	0/0:26,0:27:4.93:0,5,1096	0/0:36,0:33:87.24:0,87,1308	0/0:21,0:21:54.13:0,54,777	0/0:78,2:79:99:0,110,2716	0/0:24,1:25:31.08:0,31,1004	0/0:28,0:28:75.23:0,75,1190	0/0:50,0:50:99:0,129,2021	0/0:27,0:27:38.87:0,39,632	0/0:41,0:40:89.28:0,89,1339	0/0:34,0:34:58.31:0,58,910	0/0:21,0:20:48.61:0,49,766
chr10	5132217	.	CCT	C	694.56	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.357;DP=1068;FS=6.881;HRun=0;HaplotypeScore=196.5817;InbreedingCoeff=0.9993;MQ=57.24;MQ0=5;MQRankSum=-0.684;QD=19.84;ReadPosRankSum=0.841;VQSLOD=3.4522;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,24:34:64.87:789,65,0	0/0:10,0:10:30.10:0,30,498	0/0:39,0:27:67.37:0,67,781	0/0:40,0:24:35.73:0,36,516	0/0:35,0:35:90.22:0,90,1366	0/0:33,0:33:87.28:0,87,1447	0/0:36,0:36:85.43:0,85,1385	0/0:55,0:54:99:0,132,2008	0/0:42,0:42:99:0,114,1722	0/0:43,0:42:99:0,114,1742	0/0:18,0:18:48.16:0,48,798	0/0:47,0:47:99:0,129,1990	0/0:51,0:51:99:0,129,2014	0/0:39,0:39:99:0,108,1732	0/0:59,0:58:99:0,116,1809	0/0:48,0:48:99:0,109,1652	0/0:26,0:25:60.11:0,60,919	0/0:19,0:19:49.08:0,49,662	0/0:32,0:32:90.29:0,90,1458	0/0:31,0:31:87.28:0,87,1441	0/0:87,0:87:99:0,229,3709	0/0:28,0:28:66.21:0,66,1072	0/0:25,0:25:72.23:0,72,1191	0/0:54,1:55:99:0,99,2139	0/0:24,0:24:54.17:0,54,892	0/0:41,0:41:99:0,107,1552	0/0:37,0:37:78.18:0,78,1217	0/0:33,0:33:84.21:0,84,1318
chr10	5132278	.	CCT	C	2014.50	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=11.172;DP=1027;FS=0.958;HRun=0;HaplotypeScore=190.9922;InbreedingCoeff=0.9719;MQ=61.62;MQ0=2;MQRankSum=-6.649;QD=21.90;ReadPosRankSum=-2.753;VQSLOD=3.5336;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:13:10.70:47,11,0	0/0:13,0:13:11.20:0,11,488	0/0:39,0:30:40.76:0,41,891	0/0:46,0:37:79.13:0,79,1119	0/0:27,0:27:69.22:0,69,1143	0/0:46,0:46:99:0,114,1932	0/0:39,0:39:99:0,102,1703	1/1:14,27:40:90.29:1169,90,0	0/0:41,0:41:99:0,114,1921	0/0:58,0:58:99:0,147,2463	0/0:26,0:26:63.22:0,63,1057	0/0:49,0:49:99:0,135,2224	0/0:30,0:30:84.29:0,84,1403	0/0:44,0:44:99:0,108,1827	0/0:63,0:62:99:0,132,2174	1/1:6,32:38:30.18:937,30,0	0/0:21,0:21:60.20:0,60,1005	0/0:19,0:20:50.64:0,51,775	0/0:26,0:26:66.23:0,66,1114	0/0:26,0:26:60.17:0,60,1021	0/0:67,0:66:99:0,181,3032	0/0:24,0:24:63.22:0,63,1063	0/0:25,0:24:60.21:0,60,1012	0/0:60,0:59:99:0,144,2425	0/0:29,0:29:69.46:0,69,886	0/0:52,0:51:89.17:0,89,1869	0/0:33,0:33:51.84:0,52,1065	0/0:29,0:29:35.79:0,36,884
chr10	5132282	.	TCTCTCTCATA	T	969.15	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=9.481;DP=1021;FS=10.126;HRun=0;HaplotypeScore=347.5217;InbreedingCoeff=0.1828;MQ=61.77;MQ0=2;MQRankSum=-8.514;QD=5.70;ReadPosRankSum=-3.104;VQSLOD=0.6973;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,8:12:25.80:592,26,0	0/0:13,0:13:30.10:0,30,1497	0/0:41,0:34:71.23:0,71,2274	0/0:46,0:34:80.76:0,81,2504	0/0:27,0:27:71.97:0,72,3568	0/0:45,0:45:99:0,120,5796	0/0:39,0:39:99:0,105,4985	0/0:43,0:42:99:0,104,2069	0/0:41,0:41:99:0,114,5367	0/0:56,0:56:99:0,147,6662	0/0:24,0:24:60.68:0,61,2998	0/0:50,0:50:99:0,135,6344	0/0:30,0:30:87.26:0,87,4193	0/0:41,0:41:99:0,102,4789	0/0:64,0:64:20.60:0,21,6607	0/0:39,0:39:85.65:0,86,2727	0/0:22,0:22:63.20:0,63,2845	0/1:21,0:21:21.27:21,0,1866	0/0:29,0:29:72.21:0,72,2842	0/0:24,0:24:63.19:0,63,2865	0/0:68,0:67:99:0,184,8386	0/0:23,0:23:63.20:0,63,3003	0/0:26,0:25:60.19:0,60,2906	0/0:60,0:59:99:0,150,6992	0/1:27,0:27:99:129,0,2077	0/1:50,0:49:99:121,0,5314	0/1:35,0:35:99:158,0,3335	0/1:25,0:25:85.27:85,0,2628
chr10	5132284	.	TCTCTCATA	T	773.99	PASS	AB=0.908;AC=6;AF=0.107;AN=56;BaseQRankSum=10.252;DP=1012;FS=8.043;HRun=0;HaplotypeScore=306.9528;InbreedingCoeff=0.2077;MQ=61.94;MQ0=2;MQRankSum=-8.967;QD=5.34;ReadPosRankSum=-2.576;VQSLOD=0.9178;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:11:25.25:300,25,0	0/0:11,0:11:30.10:0,30,1301	0/0:41,0:35:80.88:0,81,2405	0/0:47,0:36:71.96:0,72,2474	0/0:28,0:28:74.99:0,75,3157	0/0:42,0:42:99:0,120,5008	0/0:42,0:42:99:0,114,4629	0/0:44,0:43:99:0,108,1608	0/0:40,0:40:99:0,117,4734	0/0:55,0:55:99:0,154,6143	0/0:23,0:23:63.67:0,64,2611	0/0:51,0:51:99:0,138,5610	0/0:33,0:33:96.33:0,96,3868	0/0:39,0:39:99:0,108,4272	0/0:59,3:62:6.36:0,6,5554	0/0:38,0:38:87.74:0,88,2079	0/0:23,0:22:63.22:0,63,2522	0/0:21,0:21:1.20:0,1,1662	0/0:28,0:28:75.25:0,75,2705	0/0:24,0:24:63.69:0,64,2516	0/0:67,0:66:99:0,190,7576	0/0:24,0:24:66.23:0,66,2692	0/0:24,0:23:63.20:0,63,2508	0/0:60,0:59:99:0,156,6308	0/1:23,4:27:99:182,0,1762	0/1:45,3:48:99:129,0,4695	0/1:31,4:35:99:190,0,2866	0/1:22,2:24:99:102,0,2262
chr10	5132298	.	TCA	T	935.66	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.922;DP=953;FS=5.823;HRun=0;HaplotypeScore=184.6529;InbreedingCoeff=0.9726;MQ=60.38;MQ0=2;MQRankSum=-6.876;QD=19.49;ReadPosRankSum=-3.852;VQSLOD=2.5331;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,0:8:9.77:40,10,0	0/0:10,0:10:24.08:0,24,411	0/0:32,0:30:42.66:0,43,791	0/0:38,0:29:49.26:0,49,640	0/0:33,0:33:84.09:0,84,1311	0/0:41,0:41:99:0,111,1791	0/0:43,0:43:99:0,105,1714	1/1:17,23:37:87.08:1011,87,0	0/0:38,0:38:99:0,105,1761	0/0:46,0:46:99:0,123,2061	0/0:24,0:24:60.17:0,60,971	0/0:44,0:44:99:0,114,1895	0/0:32,0:32:87.26:0,87,1426	0/0:33,0:33:90.31:0,90,1538	0/0:60,0:60:99:0,145,2358	0/0:35,0:35:84.23:0,84,1352	0/0:22,0:20:51.15:0,51,843	0/0:19,0:19:43.85:0,44,617	0/0:24,0:24:57.19:0,57,945	0/0:23,0:23:62.77:0,63,1002	0/0:67,0:66:99:0,156,2469	0/0:24,0:24:60.19:0,60,996	0/0:22,0:21:60.17:0,60,972	0/0:60,0:59:99:0,153,2456	0/0:27,0:27:73.06:0,73,1053	0/0:45,0:45:89.67:0,90,1806	0/0:38,0:38:75.44:0,75,1393	0/0:25,0:25:41:0,41,892
chr10	5132321	.	C	CCT	1717.49	PASS	AB=0.843;AC=4;AF=0.071;AN=56;BaseQRankSum=10.207;DP=970;FS=2.948;HRun=0;HaplotypeScore=198.2234;InbreedingCoeff=0.6110;MQ=58.60;MQ0=2;MQRankSum=-6.781;QD=18.27;ReadPosRankSum=-5.037;VQSLOD=2.7008;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:9,5:14:30.10:444,30,0	0/0:11,0:11:27.03:0,27,315	0/0:32,0:26:59.30:0,59,701	0/0:41,0:35:30.35:0,30,611	0/0:35,0:35:93.20:0,93,1115	0/0:37,0:37:96.20:0,96,1156	0/0:43,0:43:99:0,120,1473	0/1:43,0:41:99:506,0,172	0/0:39,0:39:93.21:0,93,1109	0/0:43,0:43:99:0,111,1387	0/0:25,0:25:72.20:0,72,892	0/0:39,0:39:99:0,108,1372	0/0:33,0:33:93.25:0,93,1159	0/0:34,0:34:87.20:0,87,1043	0/0:61,0:59:99:0,126,1538	0/1:20,17:37:1.41:884,0,1	0/0:30,0:28:54.43:0,54,718	0/0:20,0:20:41.05:0,41,476	0/0:27,0:27:66.17:0,66,806	0/0:19,0:19:51.13:0,51,618	0/0:50,0:49:99:0,135,1659	0/0:23,0:23:60.05:0,60,741	0/0:23,0:22:59.88:0,60,718	0/0:55,0:54:99:0,147,1804	0/0:28,0:30:46.69:0,47,574	0/0:51,0:54:95.98:0,96,1146	0/0:39,0:42:48.39:0,48,847	0/0:22,0:26:64.59:0,65,761
chr10	5132329	.	T	TCA	2022.98	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=6.623;DP=990;FS=6.804;HRun=0;HaplotypeScore=214.8561;InbreedingCoeff=0.7404;MQ=57.78;MQ0=2;MQRankSum=-4.037;QD=20.86;ReadPosRankSum=-6.057;VQSLOD=1.7745;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:16:8.04:234,8,0	0/0:9,0:9:21.04:0,21,253	0/0:36,0:30:54.79:0,55,720	0/0:41,0:35:18.52:0,19,616	0/0:34,0:34:84.23:0,84,1038	0/0:34,0:34:84.25:0,84,1062	0/0:44,0:44:99:0,108,1348	1/1:16,35:49:69.62:1482,70,0	0/0:34,0:34:81.24:0,81,1012	0/0:43,0:43:99:0,111,1366	0/0:27,0:27:51.23:0,51,870	0/0:40,0:40:99:0,108,1301	0/0:34,0:34:93.23:0,93,1135	0/0:38,0:38:87.20:0,87,1034	0/0:67,0:65:99:0,125,1566	0/1:30,0:30:65.16:431,0,65	0/0:32,0:30:42.02:0,42,720	0/0:19,0:19:45.07:0,45,519	0/0:29,0:29:68.55:0,69,807	0/0:19,0:19:48.10:0,48,561	0/0:52,0:51:99:0,127,1563	0/0:23,0:23:63.06:0,63,753	0/0:24,0:23:57.16:0,57,704	0/0:56,0:55:99:0,144,1764	0/0:32,0:32:52.67:0,53,606	0/0:57,0:55:99:0,117,1453	0/0:38,0:37:91.72:0,92,1027	0/0:31,0:31:54.02:0,54,794
chr10	5132359	.	G	GTC	3880.88	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=17.302;DP=1064;FS=0.304;HRun=0;HaplotypeScore=269.9470;InbreedingCoeff=0.2986;MQ=61.39;MQ0=6;MQRankSum=-10.793;QD=9.22;ReadPosRankSum=-0.404;VQSLOD=2.9355;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,25:31:69.13:1062,69,0	0/0:14,0:14:33.11:0,33,445	0/0:54,0:36:84.30:0,84,1036	0/0:46,0:37:43.93:0,44,653	0/0:34,0:34:96.26:0,96,1246	0/0:33,0:33:90.25:0,90,1167	0/0:41,0:41:99:0,108,1394	1/1:41,9:50:98.29:1130,98,0	0/0:38,0:38:99:0,99,1287	0/0:37,0:37:93.24:0,93,1161	0/0:32,0:32:81.21:0,81,1028	0/0:37,0:37:99:0,102,1245	0/0:35,0:35:99:0,102,1334	0/0:34,0:34:90.23:0,90,1163	0/1:76,0:74:99:223,0,487	1/1:8,18:26:30.19:786,30,0	0/1:34,0:32:99:138,0,141	0/1:16,0:16:49.86:64,0,50	0/0:25,0:25:63.18:0,63,802	0/0:23,0:23:66.19:0,66,873	0/0:52,0:52:99:0,132,1686	0/0:23,0:23:66.19:0,66,859	0/0:27,0:27:65.96:0,66,794	0/0:57,0:57:99:0,156,1961	0/1:41,0:41:48.48:137,0,48	0/1:67,0:67:70.84:71,0,589	0/1:51,0:50:99:229,0,179	0/1:29,0:29:41.33:41,0,343
chr10	5132372	.	A	ACT	13022.58	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=19.082;DP=1047;FS=5.617;HRun=0;HaplotypeScore=238.4652;InbreedingCoeff=0.9853;MQ=61.23;MQ0=8;MQRankSum=-10.355;QD=31.23;ReadPosRankSum=3.518;VQSLOD=5.1276;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:32,0:32:75.09:1116,75,0	0/0:14,0:14:42.14:0,42,552	0/0:56,0:35:74.66:0,75,726	0/0:53,0:38:15.33:0,15,393	0/0:34,0:34:96.22:0,96,1192	0/0:31,0:31:81.19:0,81,1025	0/0:45,0:45:99:0,120,1369	1/1:47,0:47:92.59:1080,93,0	0/0:34,0:34:93.29:0,93,1213	0/0:31,0:31:89.96:0,90,1010	0/0:27,0:27:72.18:0,72,896	0/0:32,0:32:84.23:0,84,1059	0/0:35,0:35:90.24:0,90,1132	0/0:33,0:33:93.10:0,93,1161	1/1:32,43:73:99:2377,163,0	1/1:25,0:25:51.13:796,51,0	1/1:15,20:33:70.63:1046,71,0	1/1:6,11:17:7.20:606,7,0	0/0:22,0:22:57.15:0,57,692	0/0:25,0:25:72.12:0,72,898	0/0:49,0:49:99:0,123,1545	0/0:21,0:21:57.15:0,57,712	0/0:26,0:26:78.22:0,78,987	0/0:54,0:54:99:0,147,1840	1/1:13,29:42:60.28:1217,60,0	1/1:28,36:64:99:2376,162,0	1/1:24,27:50:99:1691,116,0	1/1:18,11:29:35.60:718,36,0
chr10	5132417	.	TCA	T	2159.95	PASS	AB=0.833;AC=15;AF=0.268;AN=56;BaseQRankSum=12.302;DP=872;FS=21.545;HRun=0;HaplotypeScore=219.0494;InbreedingCoeff=0.7081;MQ=59.42;MQ0=4;MQRankSum=-9.731;QD=8.06;ReadPosRankSum=-3.219;VQSLOD=1.4360;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:17.89:0,18,146	0/0:19,1:20:23.17:0,23,815	0/0:43,0:16:9.35:0,9,172	0/0:50,0:33:44.63:0,45,550	0/0:33,0:33:84.01:0,84,1179	0/0:22,0:22:57.19:0,57,926	0/0:32,1:33:66.18:0,66,1002	0/1:33,0:33:21.67:22,0,338	0/0:31,0:31:78.18:0,78,1132	0/0:32,1:33:50.35:0,50,1265	0/0:25,1:26:26.41:0,26,934	0/0:32,0:32:87.17:0,87,1305	0/0:24,0:24:57.11:0,57,820	0/0:32,0:32:75.20:0,75,1140	1/1:38,10:48:20.89:201,21,0	1/1:8,15:23:42.12:500,42,0	1/1:23,7:28:17.99:207,18,0	0/1:12,4:17:16.36:141,0,16	0/0:23,0:22:57.13:0,57,849	0/0:30,0:30:66.09:0,66,994	0/0:48,2:49:43.25:0,43,1559	0/0:17,0:18:23.19:0,23,590	0/0:25,0:25:57.14:0,57,876	0/0:42,0:42:93.03:0,93,1457	1/1:19,10:29:18.04:209,18,0	0/1:25,15:40:17.83:483,0,18	1/1:21,18:39:15.89:486,16,0	1/1:6,3:9:11.95:102,12,0
chr10	5132438	.	AGCGTGCGC	A	985.69	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=5.298;DP=618;FS=9.841;HRun=0;HaplotypeScore=204.5381;InbreedingCoeff=0.8732;MQ=64.37;MQ0=2;MQRankSum=-3.268;QD=18.25;ReadPosRankSum=-2.242;VQSLOD=1.4782;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,7:19:8.99:190,9,0	0/0:20,0:20:51.16:0,51,2020	1/1:12,0:5:1.18:3,1,0	0/0:26,0:21:33.67:0,34,247	0/0:33,0:33:87.26:0,87,3427	0/0:22,0:22:60.13:0,60,2129	0/0:26,0:26:66.13:0,66,2104	1/1:3,19:22:47.92:910,48,0	0/0:30,0:30:84.22:0,84,2732	0/0:35,0:35:99:0,102,3840	0/0:20,0:20:57.15:0,57,1969	0/0:27,0:27:75.21:0,75,2639	0/0:18,0:18:51.16:0,51,1822	0/0:26,0:26:75.26:0,75,3120	0/0:14,0:14:17.91:0,18,267	0/0:19,0:19:42.14:0,42,669	0/0:14,0:12:21.07:0,21,349	0/0:8,0:8:23.96:0,24,256	0/0:23,0:23:66.17:0,66,2130	0/0:24,0:24:59.81:0,60,2126	0/0:36,0:36:99:0,99,4009	0/0:21,0:21:57.15:0,57,2007	0/0:20,0:20:57.18:0,57,2319	0/0:34,0:34:90.22:0,90,3301	0/0:15,0:15:18.06:0,18,274	0/0:23,0:22:59.75:0,60,686	0/0:23,0:22:27.03:0,27,464	0/0:5,0:5:9.03:0,9,121
chr10	5132442	.	TGC	T	2310.42	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=13.332;DP=604;FS=7.886;HRun=0;HaplotypeScore=131.1846;InbreedingCoeff=0.8589;MQ=66.33;MQ0=0;MQRankSum=-11.259;QD=12.84;ReadPosRankSum=1.192;VQSLOD=3.1796;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:18:5.68:28,6,0	0/0:18,0:18:47.89:0,48,641	0/0:11,0:5:1.77:0,2,13	0/1:26,0:20:28.81:29,0,40	0/0:34,0:34:86.92:0,87,1353	0/0:22,0:22:52.73:0,53,835	0/0:28,1:29:25.34:0,25,921	1/1:19,0:19:25.57:125,26,0	0/0:29,0:29:48.16:0,48,794	0/0:32,0:32:81.25:0,81,1317	0/0:19,1:20:42.10:0,42,656	0/0:24,1:25:13.31:0,13,733	0/0:19,0:19:38.95:0,39,568	0/0:27,0:27:72.22:0,72,1160	1/1:3,11:14:18.06:227,18,0	1/1:4,16:20:42.13:530,42,0	1/1:3,12:13:24.03:283,24,0	1/1:4,4:8:12.04:151,12,0	0/0:22,0:22:45.14:0,45,693	0/0:26,0:26:51.12:0,51,779	0/0:36,0:36:93.07:0,93,1428	0/0:19,0:19:42.14:0,42,694	0/0:18,0:18:51.16:0,51,820	0/0:37,0:37:78.25:0,78,1270	1/1:2,11:13:18.06:227,18,0	1/1:9,12:20:33.10:412,33,0	1/1:4,17:20:33.06:398,33,0	1/1:1,4:5:9.03:113,9,0
chr10	5132516	.	AT	A	3964.09	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=13.475;DP=667;FS=0.345;HRun=8;HaplotypeScore=78.1655;InbreedingCoeff=0.9655;MQ=71.40;MQ0=0;MQRankSum=-6.010;QD=26.25;ReadPosRankSum=1.308;VQSLOD=4.2644;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:72.22:0,72,869	0/0:14,0:14:39.09:0,39,457	0/0:21,0:21:51.75:0,52,608	0/0:11,0:10:2.67:0,3,212	0/0:42,0:41:99:0,111,1340	0/0:28,0:28:81.24:0,81,968	0/0:31,0:31:81.22:0,81,946	0/0:39,0:39:99:0,105,1250	0/0:28,0:28:81.24:0,81,967	0/0:30,0:30:75.22:0,75,889	0/0:26,0:25:72.22:0,72,867	0/0:19,0:19:54.17:0,54,652	0/0:10,0:10:30.09:0,30,362	0/0:20,0:20:57.17:0,57,678	1/1:2,23:25:75.12:723,75,0	0/0:19,0:19:48.15:0,48,580	1/1:5,22:26:53.67:640,54,0	1/1:2,15:17:45.07:434,45,0	0/0:22,0:22:57.17:0,57,688	0/0:26,0:26:75.23:0,75,903	0/0:18,0:18:54.15:0,54,641	0/0:25,0:25:69.21:0,69,834	0/0:29,0:29:81.21:0,81,962	0/0:33,0:33:93.26:0,93,1101	1/1:0,20:20:60.10:579,60,0	1/1:7,26:33:87.12:835,87,0	1/1:2,21:22:60.09:579,60,0	1/1:0,6:6:18.03:174,18,0
chr10	5133654	.	T	TAAA	533.78	PASS	AB=1.000;AC=4;AF=0.071;AN=56;BaseQRankSum=7.910;DP=519;FS=0.995;HRun=11;HaplotypeScore=78.4554;InbreedingCoeff=0.5835;MQ=69.52;MQ0=2;MQRankSum=-0.718;QD=11.12;ReadPosRankSum=-1.552;VQSLOD=0.3094;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:31:74.87:0,75,842	0/0:10,0:10:27.06:0,27,316	0/1:17,0:11:0.32:0,0,30	0/1:13,0:8:3.10:3,0,29	0/0:19,0:19:48:0,48,521	0/0:25,0:26:61.66:0,62,706	0/0:16,0:16:39.08:0,39,456	0/0:30,0:30:66.05:0,66,748	0/0:17,0:18:34.57:0,35,418	0/0:20,0:23:38.03:0,38,450	0/0:11,0:11:18.76:0,19,210	0/0:25,0:25:66.14:0,66,756	0/0:12,0:12:26.98:0,27,315	0/0:10,0:10:30.05:0,30,335	0/0:20,0:20:57.15:0,57,660	1/1:3,12:18:36.10:628,36,0	0/0:22,0:22:51.02:0,51,596	0/0:45,0:47:99:0,99,1143	0/0:20,0:20:40.37:0,40,447	0/0:20,0:20:48.07:0,48,560	0/0:19,0:19:48.05:0,48,559	0/0:6,0:6:14.69:0,15,151	0/0:5,0:5:15.03:0,15,164	0/0:7,0:7:18.04:0,18,210	0/0:19,0:20:31.24:0,31,573	0/0:24,0:23:47.99:0,48,548	0/0:20,0:22:57.27:0,57,696	0/0:8,0:8:24.07:0,24,281
chr10	5134330	.	T	TCC	1275.38	PASS	AB=0.904;AC=14;AF=0.250;AN=56;BaseQRankSum=-1.248;DP=497;FS=6.940;HRun=1;HaplotypeScore=80.9793;InbreedingCoeff=0.4911;MQ=50.83;MQ0=31;MQRankSum=-1.326;QD=8.80;ReadPosRankSum=1.286;VQSLOD=0.3925;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:9:11.34:81,11,0	0/0:4,0:4:9.01:0,9,92	0/0:42,0:10:11.83:0,12,97	0/0:71,0:15:17.07:0,17,169	0/0:21,0:21:39:0,39,403	0/0:10,0:9:12.17:0,12,137	0/0:8,0:8:15.45:0,15,125	0/1:30,0:29:99:231,0,121	0/0:21,0:21:37.89:0,38,354	0/0:10,0:10:0.42:0,0,134	0/0:12,0:11:17.99:0,18,168	0/0:16,0:16:29.94:0,30,284	0/0:13,0:13:28.62:0,29,209	0/0:13,0:13:33.48:0,33,253	1/1:13,0:13:16.26:154,16,0	0/0:16,0:16:21.45:0,21,176	1/1:10,0:9:3.59:174,4,0	0/1:12,0:12:8.40:159,0,8	0/0:8,0:8:23.11:0,23,152	0/0:14,0:14:24.75:0,25,214	0/0:36,0:33:58.23:0,58,463	0/0:8,0:7:8.99:0,9,74	0/0:10,0:10:11.97:0,12,116	0/0:18,0:17:35.88:0,36,321	1/1:15,2:15:5.20:151,5,0	0/1:14,0:12:35.35:52,0,35	0/1:6,10:16:26.15:83,0,26	1/1:20,0:18:40.02:360,40,0
chr10	5134364	.	CATCA	C	3984.40	PASS	AB=0.924;AC=47;AF=0.839;AN=56;BaseQRankSum=-5.179;DP=271;FS=1.924;HRun=0;HaplotypeScore=71.3089;InbreedingCoeff=-0.0812;MQ=62.15;MQ0=6;MQRankSum=-0.209;QD=14.70;ReadPosRankSum=-2.559;VQSLOD=2.7512;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,0:2:2.68:11,3,0	0/1:3,0:3:11.03:41,0,11	0/1:24,0:6:6.08:6,0,131	0/1:35,2:11:62.59:110,0,63	0/1:11,0:11:18.59:152,0,19	1/1:5,0:5:13.25:119,13,0	1/1:16,0:16:41.82:444,42,0	1/1:10,1:11:18.68:246,19,0	1/1:11,0:11:7.45:154,7,0	1/1:0,10:10:26.99:283,27,0	1/1:5,0:4:7.82:59,8,0	1/1:10,1:11:18.07:205,18,0	0/1:7,0:7:6.76:74,0,7	1/1:8,0:8:20.87:213,21,0	0/1:7,1:8:5.71:85,0,6	1/1:7,0:7:0.93:140,1,0	1/1:5,0:4:11.94:154,12,0	1/1:1,0:1:2.50:9,2,0	1/1:6,0:6:15.84:150,16,0	1/1:6,0:6:8.94:70,9,0	1/1:26,0:27:40.15:623,40,0	0/1:0,5:5:0:0,0,0	1/1:4,0:4:9.47:80,9,0	0/1:11,0:10:3.32:144,0,3	1/1:7,0:6:9.43:98,9,0	0/1:5,0:5:16.95:51,0,17	1/1:10,0:10:17.43:164,17,0	1/1:7,0:6:13.77:98,14,0
chr10	5136153	.	CTCCT	C	511.06	PASS	AB=0.859;AC=6;AF=0.107;AN=56;BaseQRankSum=0.954;DP=889;FS=62.938;HRun=0;HaplotypeScore=321.3512;InbreedingCoeff=-0.1185;MQ=84.30;MQ0=0;MQRankSum=-6.567;QD=4.52;ReadPosRankSum=1.694;VQSLOD=0.3683;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,105,2873	0/1:12,6:18:99:246,0,873	0/0:33,0:33:95.94:0,96,2323	0/0:35,0:35:99:0,108,2699	0/0:20,3:23:54.97:0,55,1322	0/0:18,0:18:54.19:0,54,1464	0/0:36,1:37:49.28:0,49,2606	0/0:29,0:29:87.29:0,87,2289	0/0:39,0:39:99:0,114,3086	0/1:29,4:33:99:158,0,1759	0/1:13,2:15:16.66:17,0,938	0/0:52,0:52:99:0,150,3975	0/0:44,0:44:99:0,132,3343	0/0:43,0:43:99:0,123,3293	0/0:59,0:59:99:0,172,4566	0/0:32,0:32:96.33:0,96,2674	0/0:31,0:31:87.30:0,87,2389	0/0:30,0:30:84.14:0,84,2089	0/0:14,0:14:42.14:0,42,1112	0/0:16,1:17:45.13:0,45,1247	0/0:64,0:64:99:0,184,5004	0/0:25,5:30:21.08:0,21,1834	0/1:14,2:16:14.16:14,0,1102	0/0:54,0:54:99:0,156,4116	0/1:13,4:17:99:183,0,995	0/0:30,1:31:34.18:0,34,2443	0/0:23,1:24:63.22:0,63,1754	0/1:13,1:14:17.56:18,0,1032
chr10	5136303	.	G	GCTCTTCCA	15502.03	PASS	AB=0.866;AC=52;AF=0.963;AN=54;BaseQRankSum=1.785;DP=271;FS=35.577;HRun=0;HaplotypeScore=292.7210;InbreedingCoeff=-0.0683;MQ=78.97;MQ0=0;MQRankSum=-3.257;QD=57.20;ReadPosRankSum=2.735;VQSLOD=3.6092;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,0:10:12.46:208,12,0	1/1:2,0:2:6.02:186,6,0	0/1:11,3:14:64.85:1044,0,65	0/1:9,1:10:16.93:545,0,17	1/1:7,0:7:12.93:288,13,0	1/1:11,0:11:24.08:639,24,0	1/1:12,0:12:33.04:857,33,0	1/1:8,0:8:21.06:597,21,0	1/1:17,0:17:30.57:1105,31,0	1/1:9,0:9:22.63:725,23,0	1/1:6,0:6:11.07:333,11,0	1/1:18,0:18:36.12:1171,36,0	1/1:13,0:13:20.10:597,20,0	1/1:16,0:16:21.07:613,21,0	1/1:21,0:21:33.11:1053,33,0	1/1:15,0:15:30.10:982,30,0	1/1:3,0:3:6.02:145,6,0	1/1:6,0:6:9.03:224,9,0	1/1:3,0:3:9.03:250,9,0	1/1:5,0:5:12.04:328,12,0	1/1:15,0:15:21.47:538,21,0	1/1:1,0:1:3.01:105,3,0	1/1:2,0:2:5.98:125,6,0	1/1:13,0:13:24.04:577,24,0	1/1:9,0:9:24.08:750,24,0	1/1:13,0:13:36.06:1086,36,0	1/1:12,0:12:15.05:433,15,0	./.
chr10	5136305	.	T	TCTTCCACTGCCATTGTT	2610.80	PASS	AB=0.710;AC=32;AF=0.941;AN=34;BaseQRankSum=-2.945;DP=48;FS=8.627;HRun=0;HaplotypeScore=32.9704;InbreedingCoeff=-0.2151;MQ=150.23;MQ0=0;MQRankSum=-1.350;QD=55.55;ReadPosRankSum=-0.245;VQSLOD=0.9449;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,0:3:3.01:47,3,0	./.	0/1:7,1:12:75.02:885,0,75	0/1:3,0:5:35.34:265,0,35	1/1:3,0:3:6.02:146,6,0	1/1:1,0:2:6.02:145,6,0	1/1:2,0:2:6.02:111,6,0	1/1:2,0:2:3:26,3,0	./.	1/1:1,0:1:3.01:73,3,0	1/1:1,0:1:3.01:119,3,0	1/1:1,0:1:3.01:56,3,0	./.	1/1:1,0:1:3.01:48,3,0	1/1:2,0:2:3.01:71,3,0	./.	./.	./.	./.	1/1:1,0:1:3.01:80,3,0	1/1:5,0:6:14.98:330,15,0	./.	1/1:0,0:1:3.01:106,3,0	1/1:2,0:2:5.98:69,6,0	./.	1/1:2,0:2:6.02:125,6,0	./.	./.
chr10	5137351	.	TGCGCGCGCGCGCGCGCGCGC	T	370.45	PASS	AB=1.000;AC=4;AF=0.071;AN=56;BaseQRankSum=2.787;DP=576;FS=0.000;HRun=0;HaplotypeScore=282.8840;InbreedingCoeff=0.4793;MQ=64.69;MQ0=5;MQRankSum=-1.143;QD=5.15;ReadPosRankSum=-2.109;VQSLOD=1.6105;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:21,14:41:9.03:442,9,0	0/0:10,0:10:21.07:0,21,1364	0/1:13,0:12:19.44:24,0,19	0/1:18,0:14:7.18:8,0,7	0/0:25,0:25:51.13:0,51,3670	0/0:12,0:12:30.10:0,30,2414	0/0:21,0:21:51.16:0,51,3085	0/0:18,0:20:27.02:0,27,630	0/0:13,0:14:24.51:0,25,974	0/0:39,0:38:72.21:0,72,4478	0/0:21,0:21:55.25:0,55,2841	0/0:11,0:11:21.01:0,21,593	0/0:10,0:9:15.05:0,15,666	0/0:14,0:14:21.07:0,21,822	0/0:19,0:19:30.10:0,30,1925	0/0:21,0:24:25.89:0,26,567	0/0:25,0:26:66.16:0,66,4686	0/0:29,0:29:78.21:0,78,5157	0/0:16,0:16:30.10:0,30,1942	0/0:12,0:12:15.05:0,15,845	0/0:33,0:33:48.09:0,48,1641	0/0:19,0:18:30.01:0,30,1666	0/0:24,0:23:54.18:0,54,3139	0/0:27,0:27:66.13:0,66,4322	0/0:30,0:30:44.25:0,44,2368	0/0:20,0:19:42.14:0,42,2372	0/0:14,0:14:20.34:0,20,795	0/0:14,0:12:20.81:0,21,1474
chr10	5137375	.	C	CGAGA	841.91	PASS	AB=0.898;AC=9;AF=0.167;AN=54;BaseQRankSum=6.169;DP=462;FS=17.234;HRun=0;HaplotypeScore=100.4094;InbreedingCoeff=-0.0957;MQ=54.85;MQ0=14;MQRankSum=0.232;QD=4.53;ReadPosRankSum=-1.974;VQSLOD=0.0181;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:20.78:0,21,183	0/0:11,0:9:14.99:0,15,183	0/0:3,0:1:2.37:0,2,8	./.	0/0:25,0:21:60.15:0,60,809	0/0:17,0:16:35.50:0,35,528	0/0:19,0:19:24.79:0,25,663	0/1:18,0:16:91:122,0,91	0/0:6,0:6:11.60:0,12,158	0/1:25,0:22:99:141,0,345	0/0:17,0:16:25.85:0,26,330	0/0:7,0:7:15.02:0,15,221	0/0:7,0:6:14.95:0,15,200	0/0:8,0:7:21.07:0,21,316	0/1:11,0:10:31.95:32,0,151	0/1:18,0:17:0.41:43,0,0	0/0:31,0:29:63.45:0,63,613	0/1:29,0:29:63.28:63,0,523	0/0:10,0:9:24.30:0,24,327	0/0:8,0:8:15.03:0,15,195	0/0:8,0:8:17.98:0,18,243	0/0:19,0:16:36.54:0,37,544	0/0:22,0:20:44.88:0,45,661	0/0:19,0:19:48.10:0,48,786	0/1:13,15:30:20.76:60,0,21	0/1:14,1:21:99:436,0,166	0/1:8,0:7:35.84:36,0,118	0/1:15,0:19:45.24:45,0,65
chr10	5137377	.	C	CGAGA	2069.18	PASS	AB=0.897;AC=19;AF=0.365;AN=52;BaseQRankSum=0.408;DP=496;FS=2.815;HRun=0;HaplotypeScore=107.2127;InbreedingCoeff=0.6218;MQ=54.27;MQ0=15;MQRankSum=-2.324;QD=7.72;ReadPosRankSum=-4.094;VQSLOD=1.1817;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:34,0:34:31.50:32,0,100	0/0:10,0:8:9.03:0,9,123	0/0:5,0:2:2.37:0,2,8	./.	0/0:26,0:22:24.05:0,24,320	0/0:19,0:17:20.89:0,21,282	0/0:19,0:19:10.23:0,10,356	1/1:22,0:20:18.93:236,19,0	0/0:6,0:6:5.91:0,6,86	0/1:15,10:24:6.35:587,0,6	./.	0/0:8,0:8:14.78:0,15,189	0/0:7,0:6:11.63:0,12,148	0/0:9,0:8:21.05:0,21,270	1/1:7,5:12:5.75:145,6,0	1/1:21,0:20:6.02:86,6,0	0/1:31,0:29:37.08:37,0,257	1/1:13,19:34:12.04:286,12,0	0/0:10,0:10:13.76:0,14,169	0/0:9,0:9:12.91:0,13,150	0/0:8,0:8:12.02:0,12,148	0/0:20,0:17:35.99:0,36,429	0/0:22,0:21:30.10:0,30,435	0/0:18,0:18:30.10:0,30,469	1/1:29,0:29:12.01:149,12,0	1/1:24,0:22:37.37:482,37,0	1/1:10,0:9:6.02:85,6,0	1/1:23,0:18:11.98:130,12,0
chr10	5138537	.	GTC	G	442.92	PASS	AB=0.862;AC=2;AF=0.036;AN=56;BaseQRankSum=6.380;DP=748;FS=6.130;HRun=0;HaplotypeScore=106.2971;InbreedingCoeff=-0.0367;MQ=56.17;MQ0=19;MQRankSum=-1.159;QD=6.61;ReadPosRankSum=-3.115;VQSLOD=2.3068;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:23:20.35:20,0,35	0/0:13,0:13:34.70:0,35,559	0/0:51,0:21:59.78:0,60,1004	0/0:57,0:40:94.61:0,95,1449	0/0:17,0:16:48.15:0,48,872	0/0:22,0:22:63.18:0,63,1133	0/0:21,0:21:57.17:0,57,1053	0/1:26,16:41:99:510,0,1029	0/0:23,0:23:63.17:0,63,1090	0/0:30,0:28:83.86:0,84,1509	0/0:16,0:16:45.11:0,45,769	0/0:35,0:35:99:0,99,1805	0/0:29,0:29:84.27:0,84,1531	0/0:28,0:28:81.26:0,81,1492	0/0:23,0:22:57.15:0,57,981	0/0:29,0:29:25.76:0,26,240	0/0:25,0:25:69.17:0,69,1278	0/0:21,0:19:57.11:0,57,991	0/0:18,0:15:31.42:0,31,598	0/0:24,0:24:72.19:0,72,1284	0/0:57,0:50:99:0,133,2253	0/0:21,0:21:51.15:0,51,901	0/0:18,0:18:50.74:0,51,891	0/0:30,0:30:80.82:0,81,1444	0/0:15,0:14:30.10:0,30,568	0/0:23,0:23:65.91:0,66,1116	0/0:23,0:23:66.11:0,66,1086	0/0:11,0:11:30.10:0,30,578
chr10	5138539	.	C	CTGTGTCTG	1547.05	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=2.572;DP=740;FS=0.699;HRun=0;HaplotypeScore=183.2427;InbreedingCoeff=0.9049;MQ=56.02;MQ0=19;MQRankSum=-4.313;QD=21.79;ReadPosRankSum=-3.383;VQSLOD=2.1967;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:21:4.72:0,5,18	0/0:13,0:13:33.11:0,33,669	0/0:47,0:21:49.94:0,50,978	0/0:56,0:38:59.76:0,60,1177	0/0:18,0:17:36.09:0,36,819	0/0:22,0:22:45.14:0,45,1027	0/0:20,0:20:39.11:0,39,927	1/1:40,0:40:78.20:1373,78,0	0/0:22,0:22:27.13:0,27,933	0/0:30,0:28:69.23:0,69,1700	0/0:16,0:16:36.11:0,36,792	0/0:35,0:35:66.68:0,67,1554	0/0:29,0:29:63.20:0,63,1526	0/0:28,0:28:51.15:0,51,1231	0/0:24,0:23:54.02:0,54,1289	1/1:6,22:30:9.03:288,9,0	0/0:25,0:25:66.23:0,66,1664	0/0:21,0:19:57.14:0,57,1345	0/0:18,0:15:30.08:0,30,722	0/0:23,0:23:48.16:0,48,1144	0/0:58,0:51:81.28:0,81,1898	0/0:21,0:21:33.11:0,33,820	0/0:18,0:18:42.10:0,42,944	0/0:30,0:30:67.12:0,67,1570	0/0:13,0:13:33.09:0,33,758	0/0:24,0:24:33.16:0,33,862	0/0:23,0:23:63.19:0,63,1407	0/0:11,0:11:30.10:0,30,777
chr10	5138714	.	A	ACCAACTCAGGCG	2694.86	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=0.714;DP=725;FS=12.837;HRun=0;HaplotypeScore=241.5644;InbreedingCoeff=0.9948;MQ=85.75;MQ0=1;MQRankSum=-7.097;QD=81.66;ReadPosRankSum=-1.409;VQSLOD=1.7263;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:18,11:33:54.18:2790,54,0	0/0:10,0:10:27.09:0,27,852	0/0:23,0:23:51.17:0,51,1458	0/0:29,0:29:66.21:0,66,1978	0/0:23,0:23:54.19:0,54,1875	0/0:25,0:24:54.19:0,54,1857	0/0:38,0:38:96.33:0,96,3243	0/0:21,0:21:51.17:0,51,1317	0/0:23,0:23:51.16:0,51,1554	0/0:27,0:27:60.20:0,60,2003	0/0:18,0:18:45.15:0,45,1550	0/0:31,0:31:72.25:0,72,2521	0/0:26,0:26:66.23:0,66,2307	0/0:22,0:22:48.15:0,48,1500	0/0:32,0:32:84.27:0,84,2839	0/0:27,0:27:57.20:0,57,1917	0/0:36,0:36:96.33:0,96,3183	0/0:32,0:32:75.26:0,75,2372	0/0:18,0:18:42.14:0,42,1423	0/0:18,0:18:42.14:0,42,1432	0/0:42,0:42:99:0,108,3534	0/0:16,0:16:36.11:0,36,1130	0/0:31,0:31:69.22:0,69,2307	0/0:44,0:44:99:0,114,3851	0/0:26,0:26:66.23:0,66,2237	0/0:26,0:26:60.14:0,60,1842	0/0:21,0:20:57.15:0,57,1765	0/0:7,0:7:21.07:0,21,670
chr10	5139471	.	TACACAC	T	866.95	PASS	AB=0.877;AC=11;AF=0.212;AN=52;BaseQRankSum=4.016;DP=689;FS=2.854;HRun=0;HaplotypeScore=147.1814;InbreedingCoeff=0.6078;MQ=53.38;MQ0=23;MQRankSum=0.226;QD=4.90;ReadPosRankSum=-0.182;VQSLOD=2.5449;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:46:42.13:0,42,1053	0/0:13,0:13:15.05:0,15,384	./.	./.	0/0:30,0:30:51.14:0,51,1156	0/0:21,0:21:27.92:0,28,591	0/0:40,0:39:56.92:0,57,1068	0/1:29,0:27:11.09:11,0,14	0/0:21,0:23:51.12:0,51,1176	0/0:30,0:28:45.12:0,45,920	0/0:10,0:10:21.05:0,21,471	0/0:28,0:35:14.90:0,15,193	0/0:24,0:26:36.12:0,36,897	0/0:20,0:20:44.42:0,44,996	1/1:17,9:26:5.73:83,6,0	0/0:15,0:24:9.03:0,9,115	0/0:15,0:19:23.90:0,24,484	1/1:15,0:14:9.03:157,9,0	0/0:12,0:11:15.87:0,16,229	0/0:15,0:15:21.07:0,21,565	0/1:56,0:50:1.87:2,0,1053	0/0:19,0:18:27.03:0,27,473	0/0:15,0:14:18.05:0,18,394	0/0:37,0:39:64.34:0,64,1425	0/0:17,9:26:2.74:0,3,12	1/1:12,12:24:35.94:505,36,0	1/1:10,2:12:6.02:123,6,0	0/1:5,7:12:5.73:134,0,6
chr10	5142320	.	G	GA	3832.39	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-14.686;DP=750;FS=2.870;HRun=5;HaplotypeScore=67.6977;InbreedingCoeff=0.9996;MQ=78.56;MQ0=0;MQRankSum=-1.867;QD=34.53;ReadPosRankSum=-0.355;VQSLOD=3.8184;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,46:47:99:1658,126,0	0/0:15,0:15:42.11:0,42,451	0/0:21,0:21:51.07:0,51,522	0/0:20,0:20:47.97:0,48,463	0/0:31,0:31:90.21:0,90,958	0/0:27,0:27:75.19:0,75,806	0/0:25,0:25:72.15:0,72,758	1/1:5,34:39:99:1340,105,0	0/0:29,0:29:84.21:0,84,903	0/0:24,0:24:72.18:0,72,773	0/0:19,0:19:48.12:0,48,516	0/0:36,0:36:93.23:0,93,999	0/0:26,0:26:72.17:0,72,766	0/0:17,0:17:48.10:0,48,508	0/0:24,0:24:66.16:0,66,709	1/1:2,23:25:36.97:834,37,0	0/0:35,0:35:93.23:0,93,998	0/0:20,0:20:54.11:0,54,569	0/0:22,0:22:60.15:0,60,645	0/0:36,0:36:99:0,105,1129	0/0:35,0:35:99:0,102,1096	0/0:28,0:28:81.20:0,81,869	0/0:20,0:20:51.13:0,51,548	0/0:30,0:30:87.19:0,87,925	0/0:20,0:20:54.13:0,54,580	0/0:44,0:44:99:0,129,1380	0/0:26,0:26:72.18:0,72,774	0/0:9,0:9:27.07:0,27,290
chr10	5142800	.	GGCAT	G	2859.10	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=11.581;DP=680;FS=6.639;HRun=0;HaplotypeScore=115.2440;InbreedingCoeff=0.9998;MQ=86.77;MQ0=0;MQRankSum=-7.033;QD=40.27;ReadPosRankSum=-1.862;VQSLOD=2.9213;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,34:36:81.23:1475,81,0	0/0:13,0:13:33.11:0,33,880	0/0:25,0:25:63.15:0,63,1538	0/0:25,0:25:67.04:0,67,1541	0/0:34,0:34:99:0,102,2683	0/0:22,0:22:66.23:0,66,1717	0/0:23,0:23:63.20:0,63,1596	1/1:2,13:15:39.02:593,39,0	0/0:29,0:29:84.29:0,84,2202	0/0:27,0:27:81.27:0,81,2083	0/0:21,0:21:60.21:0,60,1599	0/0:25,0:25:69.24:0,69,1825	0/0:23,0:23:69.01:0,69,1706	0/0:30,0:30:81.28:0,81,2152	0/0:26,0:26:78.25:0,78,2009	1/1:2,18:20:51.17:934,51,0	0/0:29,0:29:84.21:0,84,2046	0/0:15,0:15:39.13:0,39,1031	0/0:24,0:24:66.19:0,66,1563	0/0:30,0:30:84.29:0,84,2202	0/0:44,0:44:99:0,126,3282	0/0:20,0:20:57.20:0,57,1501	0/0:18,0:18:51.15:0,51,1292	0/0:26,0:26:78.22:0,78,1967	0/0:22,0:21:60.21:0,60,1600	0/0:21,0:21:54.19:0,54,1416	0/0:13,0:13:39.13:0,39,1039	0/0:24,0:24:72.25:0,72,1854
chr10	5142866	.	A	AGCTGT	3777.84	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=4.033;DP=669;FS=0.550;HRun=0;HaplotypeScore=132.3508;InbreedingCoeff=0.9994;MQ=78.19;MQ0=0;MQRankSum=-9.592;QD=72.65;ReadPosRankSum=-3.781;VQSLOD=4.1485;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,102,1978	0/0:12,0:12:30.10:0,30,610	0/0:12,0:12:30.09:0,30,557	0/0:26,0:26:64.83:0,65,1314	0/0:19,0:19:57.17:0,57,1100	0/0:29,0:29:78.25:0,78,1579	0/0:31,0:31:93.32:0,93,1934	1/1:14,13:29:78.15:1861,78,0	0/0:34,0:34:99:0,99,2078	0/0:25,0:25:72.20:0,72,1456	0/0:16,0:16:42.14:0,42,881	0/0:21,0:21:51.16:0,51,1003	0/0:24,0:24:69.24:0,69,1449	0/0:30,0:30:87.30:0,87,1756	0/0:34,0:33:96.32:0,96,1975	1/1:3,20:23:63.22:1917,63,0	0/0:33,0:33:93.32:0,93,1938	0/0:23,0:23:69.24:0,69,1447	0/0:21,0:21:60.21:0,60,1215	0/0:25,0:25:69.70:0,70,1383	0/0:37,0:37:99:0,111,2307	0/0:20,0:20:57.20:0,57,1175	0/0:17,0:17:48.16:0,48,1008	0/0:18,0:18:51.18:0,51,1071	0/0:19,0:19:54.19:0,54,1134	0/0:20,0:20:57.20:0,57,1196	0/0:15,0:15:45.14:0,45,904	0/0:18,0:18:54.11:0,54,938
chr10	5142933	.	GCCTTC	G	1856.88	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.284;DP=632;FS=0.000;HRun=0;HaplotypeScore=139.5287;InbreedingCoeff=0.9961;MQ=82.69;MQ0=1;MQRankSum=-9.052;QD=25.44;ReadPosRankSum=-0.120;VQSLOD=3.3741;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:15,20:35:55.43:1101,55,0	0/0:7,0:7:21.07:0,21,617	0/0:22,0:20:32.49:0,32,730	0/0:35,0:31:47.10:0,47,1079	0/0:21,0:21:54.19:0,54,1567	0/0:18,0:18:42.13:0,42,1134	0/0:32,0:32:78.27:0,78,2290	1/1:13,10:23:27.08:491,27,0	0/0:30,0:30:72.22:0,72,1974	0/0:24,0:24:63.21:0,63,1778	0/0:11,0:11:33.11:0,33,970	0/0:17,0:17:42.14:0,42,1235	0/0:20,0:20:45.15:0,45,1306	0/0:35,0:35:93.30:0,93,2661	0/0:30,0:29:66.23:0,66,1926	1/1:7,8:15:21.07:407,21,0	0/0:32,0:32:75.24:0,75,2042	0/0:14,0:14:36.11:0,36,994	0/0:22,0:22:33.11:0,33,903	0/0:20,0:20:54.17:0,54,1439	0/0:43,0:43:99:0,120,3427	0/0:12,0:12:30.10:0,30,882	0/0:14,0:14:36.12:0,36,1058	0/0:19,0:19:45.15:0,45,1323	0/0:22,0:22:60.18:0,60,1618	0/0:21,0:21:60.67:0,61,1321	0/0:20,0:20:54.17:0,54,1179	0/0:16,0:16:45.15:0,45,999
chr10	5143163	.	C	CTT	2668.13	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.712;DP=817;FS=1.143;HRun=2;HaplotypeScore=96.7234;InbreedingCoeff=0.9997;MQ=87.82;MQ0=0;MQRankSum=-3.796;QD=45.22;ReadPosRankSum=-2.825;VQSLOD=2.7936;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:61,0:61:99:0,178,2516	0/0:17,0:17:51.16:0,51,731	0/0:27,0:27:72.21:0,72,1005	0/0:30,0:30:86.64:0,87,1168	0/0:39,0:39:99:0,114,1625	0/0:15,0:15:45.13:0,45,642	0/0:28,0:28:78.26:0,78,1148	1/1:5,32:37:96.33:1779,96,0	0/0:25,0:25:75.21:0,75,1061	0/0:39,0:39:99:0,111,1627	0/0:24,0:24:69.23:0,69,1015	0/0:32,0:32:93.31:0,93,1369	0/0:37,0:37:99:0,108,1564	0/0:30,0:30:90.29:0,90,1302	0/0:29,0:29:81.26:0,81,1167	1/1:1,21:21:54.19:1011,54,0	0/0:28,0:28:78.26:0,78,1136	0/0:17,0:17:45.15:0,45,653	0/0:22,0:22:60.20:0,60,883	0/0:34,0:34:99:0,99,1437	0/0:31,0:31:84.27:0,84,1215	0/0:40,0:40:99:0,120,1723	0/0:29,0:29:84.27:0,84,1210	0/0:36,0:36:99:0,105,1506	0/0:20,0:20:60.20:0,60,882	0/0:28,0:28:84.28:0,84,1236	0/0:26,0:25:75.21:0,75,1051	0/0:14,0:14:30.10:0,30,440
chr10	5143378	.	C	CAAGT	3051.70	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=10.212;DP=726;FS=3.611;HRun=0;HaplotypeScore=126.0680;InbreedingCoeff=0.9993;MQ=85.48;MQ0=0;MQRankSum=-10.906;QD=48.44;ReadPosRankSum=-2.234;VQSLOD=4.0721;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,117,2108	0/0:10,0:10:27.09:0,27,497	0/0:28,0:29:68.94:0,69,1215	0/0:21,0:21:54.18:0,54,961	0/0:31,0:31:93.28:0,93,1648	0/0:19,0:19:57.20:0,57,1024	0/0:25,0:25:66.21:0,66,1165	1/1:19,18:37:72.25:1848,72,0	0/0:30,0:30:84.29:0,84,1541	0/0:38,0:38:99:0,108,1919	0/0:24,0:24:66.22:0,66,1185	0/0:26,0:26:72.25:0,72,1324	0/0:14,0:14:39.13:0,39,718	0/0:25,0:25:69.22:0,69,1230	0/0:24,0:24:60.19:0,60,1070	1/1:6,19:25:57.08:1326,57,0	0/0:33,0:33:90.29:0,90,1617	0/0:29,0:30:84.27:0,84,1512	0/0:11,0:11:33.10:0,33,578	0/0:24,0:24:66.21:0,66,1174	0/0:45,0:45:99:0,126,2309	0/0:26,0:26:66.21:0,66,1166	0/0:17,0:17:48.16:0,48,883	0/0:29,0:29:81.28:0,81,1490	0/0:23,0:23:63.22:0,63,1159	0/0:29,0:29:75.26:0,75,1380	0/0:23,0:23:69.24:0,69,1270	0/0:16,0:16:48.10:0,48,787
chr10	5143558	.	GGTCCAGA	G	2666.27	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.840;DP=693;FS=0.000;HRun=0;HaplotypeScore=159.6244;InbreedingCoeff=0.9989;MQ=86.91;MQ0=0;MQRankSum=-9.023;QD=54.41;ReadPosRankSum=-2.767;VQSLOD=2.6232;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,132,5013	0/0:16,0:16:45.15:0,45,1695	0/0:27,0:27:75.15:0,75,2156	0/0:29,0:29:59.62:0,60,1807	0/0:17,0:17:48.15:0,48,1802	0/0:24,0:24:60.19:0,60,2254	0/0:30,0:30:78.27:0,78,2998	1/1:2,24:26:72.09:1489,72,0	0/0:20,0:20:60.19:0,60,2286	0/0:31,0:31:87.29:0,87,3207	0/0:18,0:18:54.17:0,54,1957	0/0:31,0:31:93.31:0,93,3567	0/0:23,0:23:69.21:0,69,2523	0/0:27,0:27:81.26:0,81,2908	0/0:21,0:21:60.19:0,60,2220	1/1:3,20:23:51.18:1299,51,0	0/0:26,0:26:75.26:0,75,2891	0/0:28,0:28:81.28:0,81,3194	0/0:22,0:22:63.18:0,63,2087	0/0:20,0:20:57.18:0,57,1964	0/0:40,0:40:99:0,117,4496	0/0:31,0:31:90.29:0,90,3352	0/0:23,0:23:63.19:0,63,2244	0/0:27,0:27:75.22:0,75,2651	0/0:14,0:14:42.14:0,42,1619	0/0:19,0:19:57.20:0,57,2202	0/0:26,0:26:78.23:0,78,2879	0/0:8,0:8:24.08:0,24,949
chr10	5143913	.	CAAAAT	C	8385.56	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=12.900;DP=728;FS=4.102;HRun=0;HaplotypeScore=148.8443;InbreedingCoeff=0.9985;MQ=78.25;MQ0=0;MQRankSum=-5.450;QD=48.19;ReadPosRankSum=6.172;VQSLOD=4.9030;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,123,3797	0/0:14,0:14:39.11:0,39,1073	0/0:32,0:30:78.26:0,78,2075	0/0:30,0:30:68.10:0,68,1916	0/0:29,0:29:87.30:0,87,2649	0/0:18,0:18:51.14:0,51,1432	0/0:30,0:30:87.30:0,87,2679	0/0:29,0:29:78.21:0,78,1395	0/0:24,0:24:66.19:0,66,1866	0/0:36,0:36:96.33:0,96,2943	0/0:19,0:19:51.18:0,51,1551	0/0:26,0:26:78.24:0,78,2268	0/0:28,0:28:78.22:0,78,2284	0/0:20,0:20:60.21:0,60,1844	1/1:1,38:39:96.26:1962,96,0	0/0:15,0:15:36.12:0,36,488	1/1:2,27:29:57.58:1151,58,0	1/1:1,29:30:78.20:1592,78,0	0/0:22,0:22:66.23:0,66,2047	0/0:18,0:18:54.19:0,54,1674	0/0:30,0:30:87.30:0,87,2683	0/0:26,0:26:69.24:0,69,2096	0/0:29,0:29:81.22:0,81,2223	0/0:34,0:34:99:0,102,3145	1/1:0,16:16:42.08:829,42,0	1/1:0,22:22:66.22:1341,66,0	1/1:2,27:29:54.10:1133,54,0	1/1:0,9:9:18.06:378,18,0
chr10	5143925	.	AG	A	566.05	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.755;DP=747;FS=43.640;HRun=1;HaplotypeScore=121.4294;InbreedingCoeff=0.9998;MQ=76.81;MQ0=0;MQRankSum=-8.068;QD=16.17;ReadPosRankSum=-0.243;VQSLOD=1.1010;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,135,2149	0/0:15,0:15:45.14:0,45,693	0/0:26,0:25:72.22:0,72,1068	0/0:30,0:30:87.24:0,87,1262	0/0:29,0:29:87.30:0,87,1387	0/0:20,0:20:60.20:0,60,955	0/0:30,0:30:90.29:0,90,1400	1/1:2,20:22:58.79:434,59,0	0/0:22,0:22:66.19:0,66,1004	0/0:36,0:36:99:0,105,1639	0/0:21,0:21:60.20:0,60,954	0/0:28,0:28:84.27:0,84,1319	0/0:28,0:28:84.25:0,84,1313	0/0:24,0:24:72.23:0,72,1127	0/0:35,0:35:96.77:0,97,1308	1/1:0,13:13:35.74:253,36,0	0/0:31,0:30:68.82:0,69,929	0/0:30,0:30:81.24:0,81,1113	0/0:21,0:21:63.20:0,63,965	0/0:22,0:22:63.18:0,63,960	0/0:37,0:37:99:0,105,1643	0/0:26,0:26:78.24:0,78,1196	0/0:31,0:31:84.16:0,84,1326	0/0:35,0:35:99:0,105,1675	0/0:19,0:19:51.62:0,52,696	0/0:30,0:30:84.23:0,84,1112	0/0:28,0:28:66.18:0,66,852	0/0:13,0:13:33.07:0,33,450
chr10	5143927	.	CCATGTA	C	1593.24	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.593;DP=743;FS=46.319;HRun=0;HaplotypeScore=193.6557;InbreedingCoeff=0.9999;MQ=76.74;MQ0=0;MQRankSum=-8.507;QD=46.86;ReadPosRankSum=0.141;VQSLOD=1.3296;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,135,4938	0/0:15,0:15:45.14:0,45,1606	0/0:24,0:24:66.23:0,66,2324	0/0:28,0:29:84.02:0,84,2784	0/0:29,0:29:87.30:0,87,3247	0/0:20,0:20:60.21:0,60,2259	0/0:31,0:31:93.32:0,93,3404	1/1:1,20:21:56.86:1042,57,0	0/0:22,0:22:66.23:0,66,2456	0/0:35,0:35:99:0,105,3906	0/0:21,0:21:63.22:0,63,2308	0/0:28,0:28:84.29:0,84,3131	0/0:27,0:27:81.28:0,81,3032	0/0:24,0:24:72.25:0,72,2619	0/0:35,0:35:99:0,99,3197	1/1:0,13:13:36.12:673,36,0	0/0:33,0:32:75.07:0,75,2529	0/0:30,0:30:81.25:0,81,2621	0/0:19,0:19:57.19:0,57,1894	0/0:23,0:23:69.24:0,69,2531	0/0:37,0:37:99:0,108,3928	0/0:25,0:25:75.26:0,75,2807	0/0:32,0:32:87.28:0,87,3213	0/0:35,0:35:99:0,105,3836	0/0:19,0:19:51.18:0,51,1716	0/0:30,0:30:84.76:0,85,2721	0/0:26,0:26:66.22:0,66,1988	0/0:15,0:15:39.13:0,39,1333
chr10	5144347	.	ACGG	A	1081.35	PASS	AB=0.858;AC=3;AF=0.054;AN=56;BaseQRankSum=6.772;DP=780;FS=4.738;HRun=0;HaplotypeScore=119.9594;InbreedingCoeff=-0.0549;MQ=79.72;MQ0=0;MQRankSum=-7.113;QD=12.87;ReadPosRankSum=-2.981;VQSLOD=2.7212;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,144,3328	0/0:20,0:20:60.21:0,60,1366	0/1:18,0:18:10.03:10,0,637	0/0:21,0:21:50.53:0,51,1077	0/0:22,0:22:66.23:0,66,1558	0/0:22,0:22:60.21:0,60,1413	0/0:41,0:41:99:0,120,2836	0/1:21,23:44:99:1087,0,593	0/0:21,0:21:63.22:0,63,1490	0/0:32,0:32:96.33:0,96,2269	0/0:9,0:9:27.08:0,27,592	0/0:43,0:43:99:0,123,2852	0/0:30,0:30:90.31:0,90,2122	0/0:34,0:34:99:0,99,2274	0/0:32,0:32:96.33:0,96,2220	0/1:20,2:22:81.22:81,0,267	0/0:32,0:32:96.33:0,96,2256	0/0:24,0:24:72.23:0,72,1651	0/0:25,0:25:72.25:0,72,1651	0/0:22,0:22:63.22:0,63,1479	0/0:60,0:60:99:0,178,4088	0/0:22,0:22:66.23:0,66,1511	0/0:16,0:16:48.16:0,48,1132	0/0:44,0:44:99:0,126,2950	0/0:27,0:26:75.10:0,75,1620	0/0:24,0:24:69.23:0,69,1585	0/0:16,0:16:48.15:0,48,1082	0/0:9,0:9:24.08:0,24,567
chr10	5144350	.	G	GAGTTTCTGGAATGTGA	6613.07	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.363;DP=751;FS=1.239;HRun=0;HaplotypeScore=316.9303;InbreedingCoeff=0.9349;MQ=79.33;MQ0=0;MQRankSum=-9.664;QD=157.45;ReadPosRankSum=-2.073;VQSLOD=4.0342;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,141,6097	0/0:20,0:20:60.21:0,60,2551	0/0:15,0:15:4.75:0,5,729	0/0:21,0:21:48.15:0,48,1629	0/0:22,0:22:66.23:0,66,2894	0/0:21,0:21:63.05:0,63,2478	0/0:40,0:40:99:0,120,5348	1/1:28,0:28:78.69:3518,79,0	0/0:22,0:22:63.20:0,63,2806	0/0:34,0:34:99:0,99,4378	0/0:8,0:8:24.08:0,24,1098	0/0:43,0:43:99:0,129,5454	0/0:31,0:31:93.30:0,93,4160	0/0:32,0:32:96.31:0,96,4109	0/0:30,0:30:90.28:0,90,3820	1/1:2,11:14:42.14:3095,42,0	0/0:33,0:33:96.33:0,96,4093	0/0:24,0:24:72.23:0,72,3130	0/0:27,0:27:69.23:0,69,2732	0/0:22,0:22:66.21:0,66,3004	0/0:58,0:58:99:0,175,7608	0/0:21,0:21:63.22:0,63,2585	0/0:16,0:16:48.16:0,48,1948	0/0:47,0:47:99:0,132,5413	0/0:24,0:23:72.12:0,72,2326	0/0:24,0:24:72.23:0,72,3079	0/0:17,0:17:45.15:0,45,1799	0/0:10,0:10:30.08:0,30,1224
chr10	5144387	.	T	TCTGGCC	3489.81	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-1.386;DP=766;FS=6.313;HRun=0;HaplotypeScore=165.1382;InbreedingCoeff=0.9977;MQ=80.70;MQ0=0;MQRankSum=-9.631;QD=79.31;ReadPosRankSum=-2.731;VQSLOD=3.4255;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,123,2845	0/0:12,0:12:33.11:0,33,780	0/0:24,0:24:69.17:0,69,1441	0/0:21,0:21:54.18:0,54,1161	0/0:31,0:31:84.29:0,84,1926	0/0:17,0:17:51.18:0,51,1203	0/0:42,0:42:99:0,111,2571	1/1:16,10:26:63.17:1937,63,0	0/0:21,0:21:57.20:0,57,1346	0/0:32,0:32:96.32:0,96,2226	0/0:15,0:15:39.12:0,39,875	0/0:44,0:44:99:0,132,3121	0/0:38,0:38:99:0,108,2550	0/0:31,0:31:93.31:0,93,2132	0/0:31,0:31:90.31:0,90,2106	1/1:3,14:18:45.15:1552,45,0	0/0:40,0:40:99:0,120,2815	0/0:29,0:29:84.27:0,84,1939	0/0:19,0:19:54.18:0,54,1232	0/0:21,0:21:54.17:0,54,1197	0/0:62,0:62:99:0,175,4018	0/0:22,0:22:63.22:0,63,1477	0/0:16,0:16:45.15:0,45,1047	0/0:42,0:42:99:0,114,2660	0/0:24,0:23:66.20:0,66,1422	0/0:19,0:19:54.17:0,54,1230	0/0:13,0:13:39.13:0,39,920	0/0:10,0:10:21.07:0,21,496
chr10	5144763	.	G	GAAA	7506.87	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-12.885;DP=601;FS=4.689;HRun=5;HaplotypeScore=92.3450;InbreedingCoeff=0.9700;MQ=79.64;MQ0=4;MQRankSum=-6.375;QD=48.43;ReadPosRankSum=2.254;VQSLOD=4.4334;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,99,1419	0/0:7,0:7:18.06:0,18,262	0/0:45,0:26:54.05:0,54,571	0/0:37,0:22:38.26:0,38,425	0/0:31,0:31:84.28:0,84,1223	0/0:9,0:9:27.09:0,27,398	0/0:17,0:17:45.15:0,45,662	0/0:29,0:29:63.07:0,63,689	0/0:11,0:11:33.11:0,33,485	0/0:30,0:30:87.28:0,87,1250	0/0:20,0:20:57.18:0,57,814	0/0:18,0:18:42.13:0,42,607	0/0:20,0:20:54.18:0,54,787	0/0:11,0:11:33.11:0,33,481	1/1:1,12:14:26.92:589,27,0	0/0:14,0:14:42.12:0,42,467	1/1:5,21:27:66.23:1370,66,0	1/1:3,21:24:57.20:1240,57,0	0/0:27,0:28:75.22:0,75,1040	0/0:21,0:21:63.21:0,63,928	0/0:7,0:7:21.07:0,21,310	0/0:23,0:23:59.96:0,60,808	0/0:26,0:26:60.18:0,60,867	0/0:7,0:7:15.04:0,15,221	1/1:1,23:25:57.20:1228,57,0	1/1:2,17:19:4.74:936,5,0	1/1:3,29:35:72.25:1556,72,0	1/1:2,9:11:27.09:589,27,0
chr10	5144768	.	AT	A	814.55	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=1.760;DP=578;FS=0.572;HRun=10;HaplotypeScore=88.9073;InbreedingCoeff=0.9083;MQ=79.66;MQ0=5;MQRankSum=3.169;QD=19.87;ReadPosRankSum=-3.914;VQSLOD=2.5826;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,1:38:82.25:0,82,1070	0/0:9,0:9:18.02:0,18,181	0/0:50,0:29:19.06:0,19,295	0/0:36,0:19:3.77:0,4,146	0/0:27,0:28:75.04:0,75,809	0/0:9,0:9:24.06:0,24,265	0/0:15,0:15:39.10:0,39,429	1/1:3,24:27:71.83:597,72,0	0/0:12,0:12:30.07:0,30,323	0/0:30,0:30:81.20:0,81,879	0/0:19,0:19:51.10:0,51,549	0/0:14,0:14:39.07:0,39,411	0/0:19,0:19:54.14:0,54,589	0/0:11,0:11:27.07:0,27,298	0/0:13,0:13:26.70:0,27,181	1/1:1,13:14:38.99:338,39,0	0/0:22,0:23:42.86:0,43,320	0/0:20,0:20:53.41:0,53,363	0/0:28,0:28:70.83:0,71,738	0/0:22,0:22:63.14:0,63,677	0/0:8,0:8:24.05:0,24,255	0/0:20,0:21:46.55:0,47,538	0/0:21,0:22:50.76:0,51,569	0/0:6,0:6:15.04:0,15,166	0/0:24,0:24:45.41:0,45,300	0/0:19,0:19:44.53:0,45,307	0/0:32,0:32:74.69:0,75,498	0/0:9,0:9:26.70:0,27,181
chr10	5144959	.	T	TG	1390.94	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-4.050;DP=608;FS=16.389;HRun=7;HaplotypeScore=64.8969;InbreedingCoeff=0.9975;MQ=83.57;MQ0=0;MQRankSum=-0.926;QD=26.24;ReadPosRankSum=-2.842;VQSLOD=1.6793;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:90.14:0,90,868	0/0:11,0:11:27.04:0,27,261	0/0:28,0:28:46.64:0,47,427	0/0:16,0:16:23.54:0,24,262	0/0:20,0:20:57.07:0,57,542	0/0:25,0:25:72.10:0,72,689	0/0:19,0:19:48.06:0,48,459	1/1:7,26:33:78.20:908,78,0	0/0:23,0:23:57.07:0,57,545	0/0:20,0:20:57.09:0,57,547	0/0:18,0:18:51.01:0,51,477	0/0:20,0:20:51.06:0,51,487	0/0:25,0:25:66.09:0,66,629	0/0:16,0:16:42.04:0,42,395	0/0:31,0:31:84.11:0,84,805	1/1:2,18:20:28.14:604,28,0	0/0:26,0:26:69.11:0,69,666	0/0:17,0:17:42.07:0,42,405	0/0:31,0:31:75.09:0,75,715	0/0:15,0:15:42.07:0,42,405	0/0:23,0:23:63.01:0,63,584	0/0:12,0:12:33:0,33,304	0/0:19,0:19:53.93:0,54,497	0/0:16,0:16:45.01:0,45,419	0/0:21,0:21:57.08:0,57,547	0/0:25,0:25:42.37:0,42,584	0/0:32,0:32:93.10:0,93,887	0/0:11,0:11:33.05:0,33,318
chr10	5145016	.	G	GATT	388.44	PASS	AB=0.676;AC=1;AF=0.018;AN=56;BaseQRankSum=5.891;DP=603;FS=6.807;HRun=0;HaplotypeScore=100.9976;InbreedingCoeff=-0.0184;MQ=80.72;MQ0=0;MQRankSum=-3.850;QD=16.89;ReadPosRankSum=0.813;VQSLOD=3.0617;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:93.26:0,93,1561	0/0:9,0:9:27.09:0,27,457	0/0:27,0:27:81.03:0,81,1251	0/0:21,0:21:53.02:0,53,778	0/0:20,0:20:60.19:0,60,1078	0/0:21,0:21:57.17:0,57,964	0/0:19,0:19:57.17:0,57,972	0/0:43,0:43:55.34:0,55,480	0/0:20,0:20:60.19:0,60,1058	0/0:23,0:23:69.23:0,69,1216	0/0:15,0:15:42.14:0,42,729	0/0:22,0:22:66.18:0,66,1105	0/0:24,0:24:72.21:0,72,1227	0/0:24,0:24:72.23:0,72,1273	0/0:30,0:30:87.29:0,87,1572	0/1:12,11:23:99:463,0,131	0/0:27,0:27:78.24:0,78,1349	0/0:17,0:17:48.16:0,48,859	0/0:22,0:22:63.07:0,63,1022	0/0:18,0:18:48.16:0,48,850	0/0:16,0:16:48.15:0,48,863	0/0:12,0:12:36.08:0,36,565	0/0:15,0:15:45.15:0,45,810	0/0:8,0:8:21.05:0,21,347	0/0:20,0:20:60.14:0,60,1067	0/0:26,0:26:78.26:0,78,1397	0/0:41,0:41:99:0,123,2151	0/0:9,0:9:24.02:0,24,413
chr10	5145017	.	G	GATTGA	671.70	PASS	AB=0.833;AC=2;AF=0.036;AN=56;BaseQRankSum=7.147;DP=604;FS=4.165;HRun=0;HaplotypeScore=125.3921;InbreedingCoeff=-0.0372;MQ=80.66;MQ0=0;MQRankSum=-4.144;QD=10.33;ReadPosRankSum=-0.276;VQSLOD=2.5732;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:93.29:0,93,1957	0/0:9,0:9:27.08:0,27,531	0/0:27,0:27:81.03:0,81,1562	0/0:21,0:21:54.16:0,54,1015	0/0:20,0:20:57.20:0,57,1326	0/0:20,0:20:57.17:0,57,1176	0/0:19,0:19:57.16:0,57,1206	0/1:43,0:43:24.18:24,0,279	0/0:20,0:20:60.19:0,60,1329	0/0:23,0:23:69.24:0,69,1561	0/0:16,0:16:45.13:0,45,897	0/0:22,0:22:66.21:0,66,1410	0/0:25,0:25:72.22:0,72,1526	0/0:24,0:24:72.23:0,72,1603	0/0:30,0:30:90.25:0,90,1990	0/1:11,11:22:93.12:736,0,93	0/0:27,0:27:81.23:0,81,1693	0/0:17,0:17:48.16:0,48,1053	0/0:22,0:22:63.03:0,63,1169	0/0:18,0:18:54.14:0,54,1092	0/0:17,0:17:48.16:0,48,1117	0/0:12,0:12:36.11:0,36,715	0/0:15,0:15:45.15:0,45,977	0/0:8,0:8:21.05:0,21,434	0/0:20,0:20:60.15:0,60,1336	0/0:26,0:26:78.25:0,78,1685	0/0:41,0:41:99:0,123,2613	0/0:9,0:9:24:0,24,508
chr10	5145021	.	A	AT	1066.21	PASS	AB=0.772;AC=2;AF=0.036;AN=56;BaseQRankSum=8.543;DP=615;FS=8.848;HRun=1;HaplotypeScore=75.0676;InbreedingCoeff=-0.0372;MQ=81.57;MQ0=0;MQRankSum=-6.120;QD=14.81;ReadPosRankSum=-1.491;VQSLOD=2.0918;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:84.27:0,84,1090	0/0:9,0:9:27.09:0,27,351	0/0:28,0:28:55.01:0,55,892	0/0:22,0:22:57.14:0,57,692	0/0:19,0:19:57.19:0,57,739	0/0:19,0:19:54.13:0,54,669	0/0:18,0:18:51.17:0,51,661	0/1:25,22:47:99:786,0,776	0/0:20,0:20:60.17:0,60,762	0/0:23,0:23:69.21:0,69,883	0/0:16,0:16:45.15:0,45,584	0/0:21,0:21:63.20:0,63,816	0/0:24,0:24:72.21:0,72,909	0/0:23,0:23:69.22:0,69,896	0/0:30,0:30:90.29:0,90,1168	0/1:21,4:25:99:369,0,262	0/0:27,0:27:78.24:0,78,999	0/0:16,0:16:48.16:0,48,623	0/0:24,0:24:69.22:0,69,895	0/0:18,0:18:54.18:0,54,701	0/0:16,0:16:48.16:0,48,623	0/0:13,0:13:36.10:0,36,453	0/0:15,0:15:45.15:0,45,584	0/0:9,0:9:21.07:0,21,273	0/0:20,0:20:60.19:0,60,777	0/0:29,0:29:84.26:0,84,1076	0/0:44,0:44:99:0,129,1645	0/0:11,0:11:30.10:0,30,389
chr10	5145395	.	CGCAG	C	2113.72	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.447;DP=687;FS=4.896;HRun=0;HaplotypeScore=115.2517;InbreedingCoeff=0.9841;MQ=82.08;MQ0=0;MQRankSum=-5.130;QD=44.97;ReadPosRankSum=-1.567;VQSLOD=3.6762;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:80.92:0,81,1752	0/0:6,0:6:12.04:0,12,334	0/0:19,0:19:47.29:0,47,1141	0/0:21,0:21:47.18:0,47,1122	0/0:12,0:12:33.11:0,33,923	0/0:22,0:22:63.18:0,63,1593	0/0:39,0:39:99:0,117,3144	1/1:0,25:25:69.15:1243,69,0	0/0:21,0:21:60.18:0,60,1559	0/0:28,0:28:84.25:0,84,2165	0/0:15,0:15:45.15:0,45,1251	0/0:27,0:27:81.21:0,81,2062	0/0:22,0:22:66.23:0,66,1810	0/0:30,0:30:90.31:0,90,2516	0/0:34,0:34:78.03:0,78,1799	1/1:1,21:22:54.05:992,54,0	0/0:32,0:32:93.21:0,93,2329	0/0:30,0:30:78.24:0,78,2079	0/0:16,0:16:48.16:0,48,1330	0/0:23,0:23:66.21:0,66,1749	0/0:56,0:56:99:0,159,4176	0/0:20,0:20:60.16:0,60,1578	0/0:13,0:13:36.12:0,36,997	0/0:38,0:38:99:0,108,2827	0/0:19,0:19:48.13:0,48,1223	0/0:20,0:20:57.19:0,57,1536	0/0:25,0:25:72.20:0,72,1948	0/0:15,0:15:45.12:0,45,1182
chr10	5145476	.	C	CCATGAAACA	24315.35	PASS	AB=0.512;AC=19;AF=0.339;AN=56;BaseQRankSum=-9.320;DP=635;FS=1.431;HRun=0;HaplotypeScore=156.3100;InbreedingCoeff=0.9191;MQ=74.51;MQ0=0;MQRankSum=-18.256;QD=117.47;ReadPosRankSum=0.775;VQSLOD=5.8095;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,18:35:81.28:3425,81,0	0/0:13,0:13:39.09:0,39,1142	0/0:23,0:23:66.23:0,66,1981	0/0:21,0:20:53.90:0,54,1439	0/0:22,0:22:66.23:0,66,2112	0/0:15,0:15:45.11:0,45,1390	0/0:34,0:34:96.33:0,96,2954	1/1:12,9:25:72.20:3024,72,0	0/0:25,0:25:72.23:0,72,2192	0/0:22,0:22:63.22:0,63,1983	0/0:22,0:22:60.18:0,60,1780	0/0:29,0:29:87.30:0,87,2733	0/0:20,0:20:60.15:0,60,1717	0/0:17,0:17:51.14:0,51,1530	1/1:4,26:37:90.31:4423,90,0	1/1:1,6:7:21.07:1060,21,0	1/1:4,5:10:24.08:1026,24,0	1/1:4,13:22:54.19:2593,54,0	0/0:22,0:22:60.21:0,60,1868	0/0:24,0:24:69.19:0,69,2132	0/0:43,0:43:99:0,129,3983	0/0:27,0:27:78.25:0,78,2387	0/0:21,0:21:60.19:0,60,1796	0/0:28,0:28:81.28:0,81,2546	1/1:0,17:21:51.01:2554,51,0	0/1:1,17:21:37.65:2749,0,38	1/1:5,14:19:54.14:2401,54,0	1/1:3,5:10:24.08:1061,24,0
chr10	5145673	.	TA	T	1068.46	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.563;DP=654;FS=0.620;HRun=1;HaplotypeScore=91.8733;InbreedingCoeff=0.9873;MQ=76.89;MQ0=0;MQRankSum=-8.203;QD=28.12;ReadPosRankSum=-1.290;VQSLOD=3.1051;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,111,1766	0/0:5,0:5:15.05:0,15,240	0/0:18,0:18:54.15:0,54,822	0/0:18,0:19:49:0,49,765	0/0:16,0:16:45.15:0,45,717	0/0:11,0:11:33.10:0,33,504	0/0:36,0:36:99:0,108,1643	1/1:0,14:14:39.10:447,39,0	0/0:24,0:24:72.23:0,72,1125	0/0:20,0:20:57.09:0,57,880	0/0:11,0:11:33.11:0,33,522	0/0:32,0:32:93.32:0,93,1484	0/0:25,0:25:75.24:0,75,1166	0/0:26,0:26:78.27:0,78,1247	0/0:34,0:34:96.27:0,96,1494	1/1:4,20:24:24.22:743,24,0	0/0:38,0:38:99:0,114,1822	0/0:32,0:32:90.26:0,90,1392	0/0:16,0:16:45.13:0,45,672	0/0:7,0:7:21.07:0,21,336	0/0:55,0:55:99:0,160,2514	0/0:15,0:15:45.15:0,45,716	0/0:11,0:11:33.11:0,33,527	0/0:44,0:44:99:0,129,1957	0/0:20,0:20:60.20:0,60,956	0/0:26,0:26:78.23:0,78,1220	0/0:26,0:25:72.23:0,72,1121	0/0:8,0:8:24.07:0,24,358
chr10	5145677	.	CAAGT	C	1714.29	PASS	AB=0.535;AC=3;AF=0.054;AN=56;BaseQRankSum=9.466;DP=650;FS=0.653;HRun=0;HaplotypeScore=128.9347;InbreedingCoeff=0.6454;MQ=77.07;MQ0=0;MQRankSum=-9.066;QD=47.62;ReadPosRankSum=-0.618;VQSLOD=4.1013;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,111,2945	0/0:5,0:5:15.05:0,15,435	0/0:18,0:18:54.19:0,54,1464	0/0:19,0:19:54.19:0,54,1428	0/0:16,0:16:48.12:0,48,1323	0/0:12,0:12:36.12:0,36,978	0/0:35,0:35:99:0,105,2891	1/1:1,12:13:36.12:670,36,0	0/0:23,0:23:69.24:0,69,1945	0/0:21,0:21:60.21:0,60,1734	0/0:10,0:10:30.09:0,30,780	0/0:32,0:32:96.33:0,96,2750	0/0:26,0:26:78.25:0,78,2154	0/0:25,0:25:75.23:0,75,2045	0/0:34,0:34:93.03:0,93,2190	0/1:3,20:23:17.71:1150,0,18	0/0:39,0:39:99:0,117,3319	0/0:31,0:31:90.29:0,90,2454	0/0:14,0:14:39.13:0,39,1125	0/0:7,0:7:21.07:0,21,609	0/0:55,0:55:99:0,160,4395	0/0:15,0:15:45.15:0,45,1264	0/0:12,0:12:36.12:0,36,979	0/0:41,0:41:99:0,123,3482	0/0:21,0:21:63.22:0,63,1765	0/0:26,0:26:78.26:0,78,2166	0/0:27,0:26:75.08:0,75,1873	0/0:9,0:9:27.09:0,27,740
chr10	5145727	.	GGCGGGGGGGGGAC	G	3083.48	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.572;DP=531;FS=0.000;HRun=0;HaplotypeScore=206.2157;InbreedingCoeff=0.9059;MQ=68.55;MQ0=0;MQRankSum=-7.052;QD=88.10;ReadPosRankSum=1.484;VQSLOD=2.9807;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:84.27:0,84,3516	0/0:1,0:1:3.01:0,3,203	0/0:14,0:12:28.75:0,29,1306	0/0:10,0:10:27.08:0,27,863	0/0:13,0:13:39.12:0,39,1919	0/0:14,0:14:42.14:0,42,2265	0/0:27,0:27:74.91:0,75,4409	1/1:2,14:16:39.12:1167,39,0	0/0:21,0:21:63.21:0,63,3905	0/0:15,0:14:39.13:0,39,1987	0/0:8,0:8:21.07:0,21,1285	0/0:34,0:34:99:0,101,5344	0/0:17,0:17:45.14:0,45,2583	0/0:25,0:25:75.20:0,75,4244	0/0:26,0:26:66.10:0,66,3030	1/1:0,19:19:51.18:2037,51,0	0/0:31,0:31:78.25:0,78,3860	0/0:23,0:23:60.18:0,60,2843	0/0:13,0:13:39.13:0,39,1981	0/0:5,0:5:15.04:0,15,680	0/0:32,0:32:90.30:0,90,5050	0/0:12,0:12:33.08:0,33,1704	0/0:13,0:13:39.13:0,39,2248	0/0:37,0:37:99:0,111,6233	0/0:17,0:17:48.13:0,48,2286	0/0:16,0:16:45.11:0,45,1925	0/0:24,0:23:57.19:0,57,2707	0/0:12,0:12:24.08:0,24,1113
chr10	5145729	.	CG	C	2874.46	PASS	AB=0.944;AC=22;AF=0.393;AN=56;BaseQRankSum=9.669;DP=538;FS=29.987;HRun=9;HaplotypeScore=84.1046;InbreedingCoeff=0.8376;MQ=68.62;MQ0=0;MQRankSum=-1.807;QD=12.23;ReadPosRankSum=6.186;VQSLOD=1.0068;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,0:35:44.81:130,45,0	0/0:1,0:1:3.01:0,3,35	0/1:13,0:11:4.48:4,0,163	0/0:12,0:12:6.03:0,6,121	0/0:13,0:13:30.05:0,30,320	0/0:15,0:15:36.09:0,36,406	0/0:26,0:26:63.15:0,63,712	1/1:14,0:14:17.28:55,17,0	0/0:24,0:24:69.12:0,69,749	0/0:15,0:14:33.08:0,33,364	0/1:7,1:8:6.37:6,0,178	0/0:36,0:36:86.50:0,87,940	0/0:17,0:17:39.11:0,39,443	0/0:27,0:27:66.17:0,66,744	1/1:5,20:25:47.63:435,48,0	1/1:19,0:19:36.41:112,36,0	1/1:4,27:31:66.03:604,66,0	1/1:4,20:24:48.01:439,48,0	0/0:14,0:14:30:0,30,312	0/0:6,0:6:12:0,12,124	0/0:32,1:33:53.57:0,54,834	0/0:14,0:14:33.07:0,33,361	0/0:13,0:13:30.09:0,30,346	0/0:37,0:37:93.26:0,93,1058	1/1:2,15:17:39.02:357,39,0	1/1:0,14:14:36.02:329,36,0	1/1:3,20:23:47.95:428,48,0	1/1:1,11:12:21.01:190,21,0
chr10	5146002	.	AG	A	1197.61	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.183;DP=561;FS=8.747;HRun=4;HaplotypeScore=72.6357;InbreedingCoeff=0.9555;MQ=82.53;MQ0=0;MQRankSum=-5.077;QD=30.71;ReadPosRankSum=-2.203;VQSLOD=2.7507;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:96.32:0,96,1344	0/0:3,0:3:9.03:0,9,126	0/0:21,0:21:51.16:0,51,682	0/0:25,0:25:44.79:0,45,679	0/0:19,0:19:57.19:0,57,786	0/0:22,0:22:63.20:0,63,866	0/0:21,0:21:60.20:0,60,840	1/1:1,24:25:69.20:816,69,0	0/0:22,0:22:66.21:0,66,906	0/0:14,0:14:42.14:0,42,587	0/0:13,0:13:39.12:0,39,527	0/0:30,0:30:87.28:0,87,1201	0/0:12,0:13:35.94:0,36,459	0/0:26,0:26:78.24:0,78,1074	0/0:24,0:24:66.22:0,66,924	1/1:0,14:14:42.13:503,42,0	0/0:35,0:35:99:0,105,1437	0/0:24,0:24:72.20:0,72,978	0/0:20,0:20:57.19:0,57,797	0/0:10,0:10:30.08:0,30,393	0/0:33,0:33:93.28:0,93,1267	0/0:16,0:16:48.15:0,48,653	0/0:12,0:12:36.08:0,36,481	0/0:12,0:12:36.12:0,36,501	0/0:18,0:18:51.16:0,51,696	0/0:23,0:23:66.22:0,66,924	0/0:28,0:28:81.25:0,81,1101	0/0:4,0:4:12.04:0,12,168
chr10	5146023	.	T	TGGCTCTTTATTTCAGAGGGTCTC	9955.09	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.041;DP=543;FS=1.972;HRun=0;HaplotypeScore=325.3469;InbreedingCoeff=0.9642;MQ=81.51;MQ0=0;MQRankSum=-10.168;QD=211.81;ReadPosRankSum=-1.324;VQSLOD=3.7937;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:93.31:0,93,4699	0/0:6,0:6:11.65:0,12,756	0/0:17,0:17:45.15:0,45,1935	0/0:22,0:21:45.59:0,46,1480	0/0:17,0:17:45.13:0,45,2220	0/0:24,0:24:72.22:0,72,3780	0/0:20,0:20:60.21:0,60,2766	1/1:32,0:32:87.25:6010,87,0	0/0:23,0:23:69.24:0,69,4006	0/0:9,0:9:24.08:0,24,1477	0/0:12,0:12:36.12:0,36,2189	0/0:29,0:29:81.25:0,81,4366	0/0:10,0:10:21.07:0,21,1328	0/0:27,0:27:78.26:0,78,4425	0/0:22,0:23:54.16:0,54,2657	1/1:11,4:15:45.14:3946,45,0	0/0:35,0:35:99:0,105,5857	0/0:24,0:24:69.21:0,69,4017	0/0:20,0:20:51.14:0,51,2252	0/0:11,0:11:27.09:0,27,1506	0/0:28,0:28:84.29:0,84,4779	0/0:14,0:14:39.10:0,39,1980	0/0:13,0:13:36.11:0,36,1888	0/0:16,0:16:48.16:0,48,2753	0/0:19,0:19:51.18:0,51,2928	0/0:20,0:20:60.19:0,60,2996	0/0:22,0:22:66.23:0,66,3836	0/0:4,0:4:12.04:0,12,583
chr10	5146168	.	G	GC	1177.91	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-7.330;DP=692;FS=7.150;HRun=2;HaplotypeScore=67.6397;InbreedingCoeff=0.9915;MQ=92.81;MQ0=0;MQRankSum=-2.939;QD=38.00;ReadPosRankSum=-4.406;VQSLOD=2.0627;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,123,1580	0/0:7,0:7:18.06:0,18,233	0/0:27,0:27:78.23:0,78,980	0/0:34,0:34:90.25:0,90,1136	0/0:22,0:22:57.15:0,57,703	0/0:22,0:22:66.21:0,66,855	0/0:24,0:24:72.23:0,72,935	1/1:0,31:31:90.19:1273,90,0	0/0:27,0:27:75.24:0,75,971	0/0:19,0:19:57.18:0,57,726	0/0:20,0:20:60.19:0,60,777	0/0:29,0:29:84.25:0,84,1062	0/0:11,0:11:30.10:0,30,387	0/0:26,0:26:78.24:0,78,998	0/0:24,0:24:66.21:0,66,854	0/0:26,0:26:75.21:0,75,941	0/0:33,0:33:96.25:0,96,1196	0/0:30,0:30:84.25:0,84,1074	0/0:15,0:15:45.14:0,45,572	0/0:20,0:20:57.18:0,57,738	0/0:33,0:33:90.29:0,90,1166	0/0:22,0:22:63.20:0,63,817	0/0:25,0:25:72.23:0,72,925	0/0:33,0:33:96.29:0,96,1228	0/0:22,0:22:66.21:0,66,857	0/0:30,0:30:90.29:0,90,1168	0/0:19,0:19:51.17:0,51,660	0/0:16,0:16:48.16:0,48,623
chr10	5146286	.	AC	A	1429.19	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.869;DP=713;FS=0.585;HRun=3;HaplotypeScore=77.7143;InbreedingCoeff=0.9978;MQ=90.91;MQ0=0;MQRankSum=-3.430;QD=29.77;ReadPosRankSum=-3.214;VQSLOD=2.1332;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,120,1684	0/0:12,0:12:36.12:0,36,516	0/0:33,0:33:96.26:0,96,1313	0/0:25,0:25:72.15:0,72,965	0/0:25,0:25:69.23:0,69,991	0/0:19,0:19:57.18:0,57,801	0/0:26,0:26:78.26:0,78,1123	1/1:1,26:27:78.24:955,78,0	0/0:22,0:22:66.15:0,66,924	0/0:25,0:25:75.24:0,75,1050	0/0:18,0:18:54.18:0,54,771	0/0:27,0:27:81.27:0,81,1166	0/0:19,0:19:57.19:0,57,820	0/0:24,0:24:72.22:0,72,1017	0/0:21,0:21:63.21:0,63,902	1/1:6,15:20:51.08:596,51,0	0/0:45,0:45:99:0,132,1856	0/0:37,0:37:99:0,102,1445	0/0:23,0:23:66.21:0,66,933	0/0:27,0:27:78.25:0,78,1100	0/0:26,0:26:78.25:0,78,1105	0/0:17,0:17:47.70:0,48,689	0/0:13,0:13:36.12:0,36,514	0/0:34,0:34:99:0,99,1422	0/0:32,0:32:93.29:0,93,1305	0/0:31,0:31:90.28:0,90,1260	0/0:27,0:27:81.27:0,81,1164	0/0:7,0:7:21.07:0,21,302
chr10	5146320	.	CATAAACG	C	2395.99	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.304;DP=655;FS=0.000;HRun=0;HaplotypeScore=155.1880;InbreedingCoeff=0.9912;MQ=82.91;MQ0=0;MQRankSum=-8.689;QD=58.44;ReadPosRankSum=-0.322;VQSLOD=3.3518;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,123,4842	0/0:10,0:10:27.09:0,27,1042	0/0:21,0:21:60.21:0,60,2294	0/0:26,0:26:72.25:0,72,2826	0/0:17,0:17:51.18:0,51,1997	0/0:27,0:27:75.26:0,75,3064	0/0:38,0:38:99:0,111,4453	1/1:8,14:22:45.14:1158,45,0	0/0:22,0:22:66.23:0,66,2610	0/0:14,0:14:42.14:0,42,1590	0/0:12,0:12:36.12:0,36,1382	0/0:28,0:28:84.29:0,84,3382	0/0:22,0:22:66.23:0,66,2621	0/0:29,0:29:87.30:0,87,3516	0/0:24,0:24:72.25:0,72,2844	1/1:3,16:19:51.18:1359,51,0	0/0:46,0:46:99:0,135,5512	0/0:35,0:35:99:0,102,4042	0/0:21,0:21:60.20:0,60,2144	0/0:20,0:20:57.20:0,57,2223	0/0:29,0:29:84.29:0,84,3391	0/0:13,0:13:36.12:0,36,1443	0/0:14,0:14:39.13:0,39,1582	0/0:36,0:36:99:0,108,4339	0/0:26,0:26:69.24:0,69,2731	0/0:21,0:21:63.22:0,63,2447	0/0:16,0:16:48.16:0,48,1828	0/0:5,0:5:15.05:0,15,419
chr10	5146337	.	AC	A	712.25	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.562;DP=654;FS=9.579;HRun=6;HaplotypeScore=77.5823;InbreedingCoeff=0.9930;MQ=87.45;MQ0=0;MQRankSum=-6.890;QD=18.26;ReadPosRankSum=-0.005;VQSLOD=2.5550;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:93.76:0,94,1209	0/0:7,0:7:18.05:0,18,222	0/0:25,0:25:72.16:0,72,908	0/0:30,0:30:79.11:0,79,950	0/0:15,0:15:45.08:0,45,531	0/0:23,0:23:63.19:0,63,811	0/0:37,0:37:99:0,105,1361	1/1:8,11:19:30.97:351,31,0	0/0:29,0:29:87.24:0,87,1087	0/0:10,0:10:30.09:0,30,382	0/0:10,0:10:30.10:0,30,393	0/0:30,0:30:81.25:0,81,1049	0/0:22,0:22:63.20:0,63,828	0/0:31,0:31:93.23:0,93,1129	0/0:21,0:21:60.20:0,60,789	1/1:2,18:19:45.11:483,45,0	0/0:44,0:44:99:0,123,1600	0/0:32,0:32:87.26:0,87,1126	0/0:23,0:23:60.17:0,60,751	0/0:18,0:18:45.14:0,45,574	0/0:31,0:31:90.25:0,90,1151	0/0:22,0:22:66.20:0,66,851	0/0:16,0:16:45.06:0,45,569	0/0:40,0:40:99:0,111,1459	0/0:18,0:18:54.18:0,54,709	0/0:22,0:22:66.20:0,66,854	0/0:14,0:14:42.14:0,42,553	0/0:7,0:7:21.05:0,21,259
chr10	5147329	.	A	AGTGTGTGT	1359.98	PASS	AB=0.903;AC=13;AF=0.271;AN=48;BaseQRankSum=0.128;DP=823;FS=2.112;HRun=0;HaplotypeScore=205.6388;InbreedingCoeff=0.1078;MQ=62.43;MQ0=6;MQRankSum=0.788;QD=4.55;ReadPosRankSum=-1.405;VQSLOD=2.5918;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:39,0:40:44.89:45,0,406	0/0:8,0:8:6.02:0,6,149	./.	./.	0/0:37,0:36:30:0,30,671	0/0:25,0:27:0.20:0,0,181	0/1:27,0:28:59.97:60,0,423	0/0:38,0:39:0.85:0,1,2	0/0:22,0:24:26.16:0,26,444	0/0:28,0:29:2.24:0,2,343	0/1:25,0:28:22.11:22,0,494	0/0:29,0:29:32.05:0,32,665	0/0:30,0:32:21.04:0,21,555	0/0:31,0:32:17.61:0,18,363	./.	1/1:21,0:34:6.02:128,6,0	0/1:23,0:48:29.66:116,0,30	0/1:22,0:22:9.79:305,0,10	0/1:21,0:22:6.36:6,0,209	0/0:21,0:24:17.62:0,18,345	0/0:33,0:33:15:0,15,238	0/0:27,0:30:20.78:0,21,321	0/0:27,0:31:21.25:0,21,581	0/0:32,0:34:28.78:0,29,459	./.	1/1:35,0:36:1.81:590,2,0	1/1:4,0:21:8.99:149,9,0	0/1:8,0:18:46.81:80,0,47
chr10	5147694	.	TA	T	708.20	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.952;DP=669;FS=8.981;HRun=8;HaplotypeScore=70.1019;InbreedingCoeff=0.9835;MQ=68.46;MQ0=0;MQRankSum=-2.333;QD=17.27;ReadPosRankSum=-3.879;VQSLOD=2.2155;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,120,1439	0/0:10,0:10:30.09:0,30,362	0/0:11,0:11:18.05:0,18,213	0/0:9,0:9:18.02:0,18,199	0/0:40,0:40:99:0,114,1368	0/0:23,0:23:54.14:0,54,631	0/0:18,0:18:48.13:0,48,568	1/1:12,29:41:84.08:803,84,0	0/0:15,0:15:39.11:0,39,460	0/0:40,0:40:99:0,111,1341	0/0:17,0:17:42.12:0,42,496	0/0:21,0:21:54.16:0,54,641	0/0:20,0:20:57.15:0,57,664	0/0:19,0:19:57.12:0,57,657	0/0:27,0:27:75.23:0,75,906	0/0:23,0:24:66.03:0,66,734	0/0:19,0:19:57.17:0,57,688	0/0:22,0:22:60.18:0,60,721	0/0:24,0:24:60.16:0,60,702	0/0:29,0:29:84.25:0,84,1003	0/0:24,0:24:66.13:0,66,746	0/0:22,0:22:60.17:0,60,712	0/0:34,0:34:93.23:0,93,1084	0/0:21,0:21:57.17:0,57,688	0/0:25,0:25:63.19:0,63,761	0/0:32,0:32:90.27:0,90,1077	0/0:26,0:26:72.17:0,72,822	0/0:14,0:14:36.09:0,36,421
chr10	5149318	.	GACACAGACACAC	G	904.81	PASS	AB=0.978;AC=6;AF=0.107;AN=56;BaseQRankSum=3.076;DP=632;FS=4.261;HRun=0;HaplotypeScore=229.8467;InbreedingCoeff=0.5952;MQ=61.08;MQ0=6;MQRankSum=-2.622;QD=10.05;ReadPosRankSum=-3.233;VQSLOD=1.7785;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:34:59.19:0,59,1385	0/0:12,0:12:36.06:0,36,1264	1/1:14,0:8:5.48:28,5,0	0/1:21,0:13:1.13:1,0,73	0/0:22,0:22:44.74:0,45,1090	0/0:19,0:19:48.07:0,48,1515	0/0:29,0:29:80.82:0,81,1962	0/1:33,0:32:99:191,0,155	0/0:18,0:18:42.09:0,42,1674	0/0:21,0:21:54.04:0,54,1431	0/0:13,0:13:32.84:0,33,921	0/0:21,0:21:59.69:0,60,2323	0/0:30,0:30:84.09:0,84,3253	0/0:25,0:24:69.04:0,69,2495	0/0:18,0:18:44.04:0,44,1309	1/1:16,4:20:54.06:805,54,0	0/0:27,0:27:69.04:0,69,2231	0/0:25,0:25:66.81:0,67,1420	0/0:15,0:14:26.96:0,27,752	0/0:12,0:12:30.03:0,30,730	0/0:32,0:31:73.78:0,74,1503	0/0:22,0:22:57.06:0,57,1792	0/0:17,0:17:36.71:0,37,781	0/0:28,0:28:83.87:0,84,2753	0/0:30,0:30:4.78:0,5,914	0/0:27,0:27:60.91:0,61,1617	0/0:26,0:26:39.40:0,39,1610	0/0:18,0:18:54.04:0,54,1867
chr10	5149320	.	CACAG	C	828.84	PASS	AB=0.986;AC=10;AF=0.179;AN=56;BaseQRankSum=4.391;DP=637;FS=1.042;HRun=0;HaplotypeScore=138.3565;InbreedingCoeff=0.0162;MQ=59.03;MQ0=9;MQRankSum=-2.895;QD=4.02;ReadPosRankSum=-4.520;VQSLOD=0.5479;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:34:62.77:0,63,748	0/0:13,0:13:39.05:0,39,645	1/1:12,0:6:7.69:38,8,0	0/1:21,0:10:0.91:1,0,77	0/0:25,0:25:27.80:0,28,541	0/1:18,0:18:15.90:16,0,676	0/0:29,0:29:69.49:0,69,1021	0/1:28,4:31:25.10:382,0,25	0/0:16,0:16:42.09:0,42,810	0/0:22,0:21:57.03:0,57,793	0/0:15,0:15:5.89:0,6,445	0/0:21,0:21:59.99:0,60,1113	0/0:30,0:30:84.11:0,84,1611	0/0:25,0:24:23.40:0,23,1077	0/1:18,0:18:23.29:23,0,571	0/1:20,0:20:13.66:329,0,14	0/0:27,0:27:68.57:0,69,945	0/0:25,0:25:33.42:0,33,658	0/0:14,0:13:27.02:0,27,361	0/0:13,0:13:33.51:0,34,404	0/0:34,0:33:56.19:0,56,514	0/0:24,0:23:59.90:0,60,904	0/0:17,0:17:14.92:0,15,428	0/0:28,0:28:83.94:0,84,1337	0/1:29,0:29:99:99,0,367	0/1:29,0:29:35.17:35,0,670	0/1:27,0:27:46.37:46,0,582	0/0:18,0:18:44.12:0,44,800
chr10	5149324	.	GAC	G	868.53	PASS	AB=0.926;AC=16;AF=0.296;AN=54;BaseQRankSum=3.518;DP=644;FS=1.064;HRun=0;HaplotypeScore=116.6676;InbreedingCoeff=-0.2274;MQ=56.13;MQ0=13;MQRankSum=0.549;QD=2.54;ReadPosRankSum=-2.058;VQSLOD=2.2289;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,1:34:7.34:0,7,396	0/1:14,1:15:4.11:4,0,380	0/0:11,0:3:0.89:0,1,2	./.	0/1:21,4:25:45.07:45,0,284	0/1:16,2:18:40.89:41,0,409	0/1:25,4:30:65.50:65,0,527	0/0:31,0:30:30.43:0,30,273	0/0:14,0:14:30.10:0,30,458	0/0:19,0:18:36.12:0,36,538	0/1:13,2:15:70.44:70,0,239	0/0:23,0:23:31.82:0,32,664	0/0:28,0:28:57.17:0,57,842	0/1:21,4:24:99:122,0,645	0/0:17,0:21:24.08:0,24,250	0/1:21,0:21:37.62:38,0,45	0/0:26,0:26:34.71:0,35,272	0/0:25,0:25:9.91:0,10,122	0/1:13,1:13:10.14:10,0,254	0/1:15,1:16:13.80:14,0,196	1/1:19,13:31:41.85:453,42,0	0/1:22,2:23:32.55:33,0,342	0/1:21,0:21:13.69:14,0,308	0/1:27,2:29:17.19:17,0,629	0/1:26,0:27:27.49:27,0,112	0/1:29,1:30:72.03:72,0,135	0/0:26,0:26:23.92:0,24,246	0/0:17,0:18:32.80:0,33,277
chr10	5149328	.	C	CAG	4831.80	PASS	AB=0.911;AC=17;AF=0.304;AN=56;BaseQRankSum=-6.993;DP=648;FS=7.226;HRun=0;HaplotypeScore=111.2355;InbreedingCoeff=0.5977;MQ=53.83;MQ0=19;MQRankSum=1.981;QD=17.07;ReadPosRankSum=1.672;VQSLOD=4.8233;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:35,0:34:99:187,0,344	0/0:15,0:15:45.04:0,45,551	0/0:17,0:1:1.25:0,1,3	0/0:19,0:3:6:0,6,52	0/1:22,1:23:0.24:0,0,448	0/1:20,1:21:16.02:16,0,547	0/0:29,0:29:75:0,75,838	0/1:30,0:29:35.18:35,0,370	0/0:13,0:13:39.09:0,39,531	0/0:20,0:19:52.84:0,53,621	0/0:13,0:13:22.06:0,22,333	0/0:23,0:23:60.06:0,60,782	0/0:25,0:25:71.81:0,72,931	0/0:26,0:25:52.91:0,53,825	1/1:17,5:22:11.39:540,11,0	0/0:22,0:22:46.35:0,46,274	1/1:15,12:27:53.91:854,54,0	1/1:17,7:24:56.79:667,57,0	0/0:14,0:11:32.45:0,32,349	0/0:17,0:17:34.33:0,34,367	0/0:34,1:34:20.10:0,20,411	0/0:23,0:22:52.03:0,52,576	0/0:23,0:23:3.68:0,4,464	0/0:30,0:30:80.55:0,81,927	1/1:6,21:27:23.34:541,23,0	1/1:5,24:30:34.80:877,35,0	1/1:5,23:28:17.53:576,18,0	0/1:7,9:16:0.09:538,0,0
chr10	5149363	.	T	TTGTG	3636.41	PASS	AB=1.000;AC=15;AF=0.288;AN=52;BaseQRankSum=1.013;DP=734;FS=0.506;HRun=0;HaplotypeScore=173.9001;InbreedingCoeff=0.8327;MQ=52.95;MQ0=32;MQRankSum=-2.199;QD=17.07;ReadPosRankSum=-2.346;VQSLOD=3.1031;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:28:14.94:0,15,140	0/0:13,0:13:20.56:0,21,272	./.	./.	0/0:20,0:20:23.96:0,24,312	0/0:24,0:27:47.24:0,47,588	0/1:31,0:31:11.62:12,0,319	0/0:21,0:23:6.01:0,6,56	0/0:22,0:22:36.10:0,36,519	0/0:16,0:19:30:0,30,406	0/0:16,0:16:24.07:0,24,342	0/0:19,0:21:27:0,27,374	0/0:27,0:27:37.65:0,38,492	0/0:25,0:27:39.11:0,39,560	1/1:12,8:25:35.59:637,36,0	0/0:7,0:16:14.96:0,15,121	1/1:15,5:28:26.68:517,27,0	1/1:12,12:27:26.36:723,26,0	0/0:21,0:21:5.55:0,6,221	0/0:12,0:13:17.74:0,18,261	0/0:35,0:36:38.93:0,39,528	0/0:22,0:23:42.12:0,42,577	0/0:20,0:23:36.96:0,37,605	0/0:22,0:24:32.69:0,33,533	1/1:15,7:23:29.34:438,29,0	1/1:27,0:30:39.12:651,39,0	1/1:24,0:31:36.12:609,36,0	1/1:14,0:14:3.01:50,3,0
chr10	5150099	.	AC	A	4914.90	PASS	AB=0.576;AC=17;AF=0.304;AN=56;BaseQRankSum=10.289;DP=614;FS=1.097;HRun=6;HaplotypeScore=62.2474;InbreedingCoeff=0.9003;MQ=88.22;MQ0=0;MQRankSum=-2.531;QD=25.47;ReadPosRankSum=2.693;VQSLOD=5.1641;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,117,1485	0/0:8,0:8:24.08:0,24,315	0/0:26,0:26:63.19:0,63,796	0/0:19,0:19:57.16:0,57,708	0/0:31,0:31:75.08:0,75,942	0/0:20,0:20:57.17:0,57,733	0/0:34,0:34:93.11:0,93,1167	1/1:4,28:32:84.19:894,84,0	0/0:18,1:19:18.92:0,19,599	0/0:25,0:25:69.22:0,69,895	0/0:13,0:13:39.11:0,39,496	0/0:16,0:16:42.10:0,42,512	0/0:16,0:16:48.14:0,48,603	0/0:16,0:16:45.15:0,45,592	1/1:2,20:22:57.14:612,57,0	1/1:2,18:20:8.64:444,9,0	1/1:1,28:29:78.19:838,78,0	1/1:3,28:31:72.18:773,72,0	0/0:23,0:23:63.18:0,63,800	0/0:24,0:24:63.19:0,63,813	0/0:34,0:34:96.24:0,96,1185	0/0:25,0:25:72.22:0,72,917	0/0:10,0:10:30.09:0,30,378	0/0:18,0:18:45.15:0,45,592	1/1:3,9:12:27.07:287,27,0	0/1:5,14:19:16.17:390,0,16	1/1:4,18:22:50.92:547,51,0	1/1:0,6:6:12.03:129,12,0
chr10	5150478	.	T	TG	261.83	PASS	AB=0.895;AC=9;AF=0.161;AN=56;BaseQRankSum=1.473;DP=539;FS=1.848;HRun=10;HaplotypeScore=101.0803;InbreedingCoeff=0.4201;MQ=82.11;MQ0=0;MQRankSum=0.050;QD=2.98;ReadPosRankSum=-1.255;VQSLOD=0.0067;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:27.97:0,28,345	0/0:11,0:11:20.87:0,21,164	0/0:21,0:22:23.36:0,23,202	0/0:27,0:22:23.06:0,23,168	0/0:16,0:16:19.87:0,20,152	0/0:19,0:19:25.72:0,26,201	0/0:17,0:20:27.04:0,27,187	1/1:13,1:14:3.82:25,4,0	0/0:26,0:26:29.89:0,30,238	0/0:22,0:22:14.55:0,15,109	0/1:8,1:9:18.49:26,0,18	0/0:21,1:23:8.96:0,9,266	0/0:17,0:18:2.64:0,3,151	0/0:10,0:10:26.34:0,26,205	0/1:15,0:16:17.83:18,0,22	1/1:17,0:17:10.61:63,11,0	0/0:32,0:32:59.22:0,59,456	0/1:16,6:22:61.78:219,0,62	0/0:9,0:10:13.97:0,14,102	0/0:15,0:16:29.35:0,29,221	0/0:33,0:33:39.10:0,39,318	0/0:12,0:12:20.94:0,21,172	0/0:15,0:15:14.96:0,15,123	0/0:21,0:21:44.80:0,45,366	1/1:7,3:10:5.96:51,6,0	0/0:18,1:19:1.91:0,2,216	0/0:23,0:23:37.94:0,38,295	0/0:15,0:16:22.94:0,23,174
chr10	5150763	.	CATA	C	4510.19	PASS	AB=0.882;AC=18;AF=0.321;AN=56;BaseQRankSum=15.149;DP=931;FS=10.008;HRun=0;HaplotypeScore=177.1809;InbreedingCoeff=0.6853;MQ=49.96;MQ0=44;MQRankSum=-12.103;QD=15.19;ReadPosRankSum=-0.004;VQSLOD=3.9306;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:38,2:32:6.65:207,0,7	0/0:22,0:22:63.19:0,63,1354	0/0:65,3:15:21.04:0,21,650	0/1:63,2:13:24.87:25,0,482	0/0:35,0:35:99:0,99,2169	0/0:45,0:45:99:0,123,2458	0/0:34,0:34:94.76:0,95,2019	0/1:22,3:20:99:169,0,419	0/0:37,0:37:99:0,108,2411	0/0:39,0:38:99:0,114,2440	0/0:29,0:29:82.49:0,82,1713	0/0:44,0:44:99:0,126,2776	0/0:35,0:35:99:0,102,2185	0/0:36,0:36:96.30:0,96,2077	1/1:12,23:33:57.11:740,57,0	1/1:15,7:19:39.56:636,40,0	0/1:12,8:18:9.03:301,0,9	1/1:8,5:13:29.92:375,30,0	0/0:24,0:19:57.20:0,57,1261	0/0:27,0:27:78.26:0,78,1647	0/0:61,0:60:99:0,169,3755	0/0:36,0:36:99:0,105,2178	0/0:29,0:29:84.26:0,84,1796	0/0:32,0:32:87.28:0,87,1841	1/1:11,17:27:42.04:523,42,0	1/1:7,20:27:10.46:964,10,0	1/1:6,11:16:29.89:417,30,0	1/1:1,4:4:11.99:156,12,0
chr10	5150764	.	AT	A	2031.52	PASS	AB=0.922;AC=19;AF=0.339;AN=56;BaseQRankSum=16.687;DP=934;FS=10.092;HRun=1;HaplotypeScore=156.5188;InbreedingCoeff=0.7563;MQ=50.07;MQ0=44;MQRankSum=-12.386;QD=6.93;ReadPosRankSum=0.618;VQSLOD=-0.1935;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:39,0:32:8.56:102,9,0	0/0:22,0:22:63.17:0,63,952	0/0:69,0:16:36.06:0,36,520	0/1:63,1:13:5.71:6,0,357	0/0:36,0:36:99:0,105,1560	0/0:44,1:45:99:0,120,1763	0/0:34,0:34:91.71:0,92,1421	0/1:18,7:20:99:182,0,272	0/0:37,0:37:99:0,108,1665	0/0:39,0:38:99:0,114,1720	0/0:30,0:30:83.94:0,84,1231	0/0:44,0:44:99:0,123,1924	0/0:35,0:35:99:0,102,1540	0/0:35,1:36:82.39:0,82,1448	1/1:26,1:33:52.41:300,52,0	1/1:12,10:19:36.42:321,36,0	0/1:19,0:17:19.29:135,0,19	1/1:12,0:12:27.74:198,28,0	0/0:24,0:19:57.19:0,57,887	0/0:28,0:28:81.04:0,81,1213	0/0:63,0:62:99:0,168,2667	0/0:36,0:36:99:0,105,1570	0/0:29,0:29:84.24:0,84,1257	0/0:34,0:34:93.09:0,93,1326	1/1:22,0:27:39.77:235,40,0	1/1:24,2:26:23.27:456,23,0	1/1:16,1:16:29.27:227,29,0	1/1:5,0:4:8.81:74,9,0
chr10	5150765	.	TA	T	2047.97	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=16.446;DP=930;FS=9.143;HRun=2;HaplotypeScore=156.9067;InbreedingCoeff=0.7401;MQ=50.00;MQ0=43;MQRankSum=-12.215;QD=6.99;ReadPosRankSum=0.590;VQSLOD=0.1577;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:39,1:32:2.85:96,3,0	0/0:21,0:21:60.20:0,60,878	0/0:69,0:17:33.09:0,33,473	0/1:62,0:13:5.70:6,0,359	0/0:36,0:36:99:0,105,1523	0/0:45,0:45:99:0,120,1646	0/0:34,0:34:93.45:0,93,1321	0/1:25,0:20:99:193,0,266	0/0:37,0:37:99:0,108,1594	0/0:39,0:38:99:0,114,1632	0/0:30,0:30:82.49:0,82,1173	0/0:45,0:45:99:0,129,1851	0/0:34,0:34:99:0,99,1439	0/0:35,0:35:96.29:0,96,1390	1/1:35,0:33:52.41:300,52,0	1/1:22,0:19:34.82:319,35,0	0/1:19,0:17:13.53:141,0,14	1/1:11,1:12:27.67:196,28,0	0/0:24,0:19:57.19:0,57,842	0/0:28,0:28:81.23:0,81,1112	0/0:62,0:61:99:0,171,2541	0/0:36,0:36:99:0,99,1412	0/0:28,0:28:81.27:0,81,1174	0/0:34,0:34:93.24:0,93,1308	1/1:27,1:27:39.77:235,40,0	1/1:26,0:26:30.65:464,31,0	1/1:16,1:16:29.27:227,29,0	1/1:5,0:4:8.81:74,9,0
chr10	5150766	.	A	AC	2536.81	PASS	AB=0.849;AC=19;AF=0.339;AN=56;BaseQRankSum=15.654;DP=934;FS=2.820;HRun=0;HaplotypeScore=158.7977;InbreedingCoeff=0.7598;MQ=49.81;MQ0=43;MQRankSum=-11.396;QD=8.48;ReadPosRankSum=-0.570;VQSLOD=3.5181;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,26:32:13.28:381,13,0	0/0:20,0:20:60.20:0,60,835	0/0:68,0:17:33.08:0,33,441	0/1:66,0:13:5.70:6,0,344	0/0:35,0:35:99:0,105,1456	0/0:43,0:44:99:0,120,1612	0/0:34,0:34:95.85:0,96,1262	0/1:19,4:20:99:221,0,243	0/0:37,0:37:99:0,108,1504	0/0:40,0:39:99:0,114,1559	0/0:29,0:29:82.50:0,82,1125	0/0:45,0:45:99:0,129,1754	0/0:35,0:35:99:0,99,1368	0/0:35,0:35:96.32:0,96,1330	1/1:32,3:33:30.85:362,31,0	1/1:20,3:20:32.83:249,33,0	0/1:13,5:18:9.90:227,0,10	1/1:8,4:12:21.24:232,21,0	0/0:24,0:19:57.18:0,57,778	0/0:28,0:28:81.21:0,81,1069	0/0:60,2:61:99:0,130,2357	0/0:33,1:34:99:0,99,1347	0/0:29,0:29:81.27:0,81,1124	0/0:35,0:35:93.27:0,93,1260	1/1:24,4:27:20.93:285,21,0	1/1:25,2:27:19.51:484,20,0	1/1:14,4:17:24.60:233,25,0	1/1:4,1:4:5.73:61,6,0
chr10	5150769	.	ACACACATG	A	4130.09	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=14.527;DP=950;FS=16.080;HRun=0;HaplotypeScore=256.0381;InbreedingCoeff=0.5645;MQ=49.41;MQ0=44;MQRankSum=-12.484;QD=17.35;ReadPosRankSum=-1.353;VQSLOD=1.0706;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:40,0:32:97.99:98,0,215	0/0:20,0:20:57.20:0,57,2436	0/0:68,0:14:30.87:0,31,828	0/0:72,0:13:30.09:0,30,714	0/0:36,0:36:99:0,99,3856	0/0:40,0:40:99:0,100,3963	0/0:37,0:36:90.31:0,90,3455	0/1:25,0:19:96.35:96,0,370	0/0:37,0:37:99:0,102,4253	0/0:39,0:38:99:0,102,4016	0/0:30,0:30:76.45:0,76,2960	0/0:44,0:44:99:0,120,4845	0/0:34,0:34:96.33:0,96,3697	0/0:36,0:36:93.32:0,93,3776	1/1:32,3:33:57.14:1016,57,0	0/1:23,0:20:54.55:55,0,186	0/1:20,0:18:4.57:118,0,5	1/1:12,1:13:11.94:276,12,0	0/0:26,0:20:57.13:0,57,2021	0/0:27,0:27:71.92:0,72,2722	0/0:66,0:65:99:0,181,7160	0/0:34,0:34:90.31:0,90,3772	0/0:28,0:28:78.27:0,78,3213	0/0:36,0:36:89.89:0,90,3607	1/1:23,5:27:41.80:746,42,0	1/1:28,2:30:45.41:1228,45,0	0/1:19,0:18:6.98:383,0,7	1/1:4,1:4:6.49:114,6,0
chr10	5150771	.	ACACATG	A	4413.57	PASS	AB=1.000;AC=18;AF=0.321;AN=56;BaseQRankSum=15.157;DP=966;FS=6.938;HRun=0;HaplotypeScore=230.7658;InbreedingCoeff=0.7488;MQ=48.79;MQ0=42;MQRankSum=-11.177;QD=18.09;ReadPosRankSum=-2.501;VQSLOD=3.3553;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:42,0:34:99:105,0,105	0/0:20,0:20:57.20:0,57,1992	0/0:69,0:16:41.17:0,41,939	0/0:76,0:16:36.02:0,36,779	0/0:36,0:36:99:0,99,3251	0/0:40,0:40:95.30:0,95,3424	0/0:37,0:36:93.32:0,93,3028	0/1:26,0:21:73.88:74,0,547	0/0:38,0:38:99:0,105,3547	0/0:38,0:37:99:0,102,3358	0/0:30,0:30:76.45:0,76,2491	0/0:44,0:44:99:0,123,4063	0/0:35,0:35:99:0,99,3229	0/0:36,0:36:93.32:0,93,3124	1/1:18,17:33:56.85:989,57,0	1/1:23,0:20:3.33:142,3,0	1/1:20,0:18:3.37:197,3,0	1/1:12,1:13:29.37:349,29,0	0/0:26,0:20:57.19:0,57,1765	0/0:26,0:26:71.92:0,72,2272	0/0:69,0:68:99:0,190,6159	0/0:34,0:34:90.31:0,90,3084	0/0:29,0:29:81.28:0,81,2740	0/0:38,0:38:92.92:0,93,3062	1/1:20,8:27:42.09:699,42,0	1/1:17,14:31:75.65:1367,76,0	1/1:16,4:19:5.52:392,6,0	1/1:6,0:5:8.51:100,9,0
chr10	5150775	.	ATG	A	4074.97	PASS	AB=0.880;AC=19;AF=0.339;AN=56;BaseQRankSum=15.092;DP=936;FS=4.306;HRun=0;HaplotypeScore=167.8112;InbreedingCoeff=0.9074;MQ=48.87;MQ0=37;MQRankSum=-10.373;QD=17.87;ReadPosRankSum=-0.375;VQSLOD=3.7418;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:28,12:32:29.50:308,30,0	0/0:22,0:22:63.21:0,63,1255	0/0:69,0:17:45.08:0,45,769	0/0:78,0:17:37.44:0,37,570	0/0:33,0:33:99:0,99,1913	0/0:39,0:39:91.65:0,92,2144	0/0:36,1:36:56.19:0,56,1772	0/1:19,2:21:99:154,0,418	0/0:36,0:36:99:0,105,2042	0/0:37,0:36:99:0,102,1959	0/0:27,0:27:76.50:0,77,1461	0/0:45,0:45:99:0,108,2417	0/0:35,0:35:99:0,105,2030	0/0:34,0:34:96.33:0,96,1881	1/1:30,4:33:55.65:587,56,0	1/1:3,20:20:39.59:489,40,0	1/1:8,9:15:13.34:195,13,0	1/1:7,6:13:38.41:406,38,0	0/0:25,0:19:54.14:0,54,1027	0/0:25,0:25:75.24:0,75,1404	0/0:69,0:68:99:0,199,3769	0/0:31,1:32:90.31:0,90,1798	0/0:28,0:28:81.28:0,81,1554	0/0:37,0:37:96.32:0,96,1845	1/1:21,4:26:37.51:387,38,0	1/1:19,9:29:80.82:1035,81,0	1/1:13,7:19:31.51:396,32,0	1/1:2,2:3:9.03:118,9,0
chr10	5153339	.	ATG	A	214.83	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.477;DP=616;FS=13.997;HRun=0;HaplotypeScore=96.0857;InbreedingCoeff=0.9767;MQ=60.96;MQ0=3;MQRankSum=-2.017;QD=9.34;ReadPosRankSum=0.518;VQSLOD=1.9618;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,18:22:24.08:308,24,0	0/0:10,0:10:27.09:0,27,453	0/0:11,0:7:18.05:0,18,242	0/0:19,0:13:26.97:0,27,355	0/0:24,1:25:24.20:0,24,959	0/0:19,0:19:42.14:0,42,698	0/0:22,0:22:50.43:0,50,861	0/0:26,0:26:66.17:0,66,1041	0/0:25,0:25:63.21:0,63,1040	0/0:38,0:38:99:0,105,1671	0/0:20,0:20:57.18:0,57,919	0/0:21,0:21:54.18:0,54,900	0/0:28,0:28:66.23:0,66,1122	0/0:20,0:20:57.18:0,57,912	0/0:24,0:24:45.15:0,45,753	0/0:15,0:15:27.09:0,27,439	0/0:33,0:33:72.25:0,72,1203	0/0:20,0:20:42.14:0,42,695	0/0:13,0:13:39.12:0,39,604	0/0:19,0:19:51.16:0,51,821	0/0:7,0:6:18.04:0,18,263	0/0:22,0:22:66.23:0,66,1103	0/0:26,0:26:75.26:0,75,1256	0/0:28,0:28:72.24:0,72,1166	0/0:41,0:41:99:0,108,1752	0/0:27,0:26:69.23:0,69,1118	0/0:23,0:23:57.19:0,57,935	0/0:11,0:11:30.10:0,30,495
chr10	5153364	.	CAT	C	6213.79	PASS	AB=0.880;AC=21;AF=0.375;AN=56;BaseQRankSum=14.210;DP=602;FS=3.616;HRun=0;HaplotypeScore=82.9375;InbreedingCoeff=0.9075;MQ=61.87;MQ0=5;MQRankSum=-0.203;QD=24.18;ReadPosRankSum=0.700;VQSLOD=5.3071;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:9,24:33:45.14:571,45,0	0/0:10,0:10:27.09:0,27,452	0/0:12,0:6:7.99:0,8,67	0/0:27,0:13:11.69:0,12,96	0/0:26,1:27:30.99:0,31,984	0/0:22,0:22:51.17:0,51,853	0/0:21,0:21:45.14:0,45,727	1/1:9,17:26:51.14:622,51,0	0/0:21,0:21:48.15:0,48,764	0/0:36,0:36:96.31:0,96,1559	0/0:24,0:24:69.17:0,69,1118	0/0:20,0:20:48.15:0,48,777	0/0:23,0:23:54.18:0,54,880	0/0:14,0:14:33.10:0,33,527	1/1:2,18:20:38.72:496,39,0	1/1:0,13:13:24.08:305,24,0	1/1:1,30:31:75.24:954,75,0	1/1:1,17:18:42.13:534,42,0	0/0:11,0:11:21.07:0,21,339	0/0:22,0:22:60.19:0,60,965	0/0:10,0:9:30.09:0,30,469	0/0:22,0:22:54.13:0,54,815	0/0:23,0:23:54.17:0,54,874	0/1:19,3:22:57.28:57,0,731	1/1:8,24:32:63.20:802,63,0	1/1:4,28:31:31.02:918,31,0	1/1:2,16:18:42.13:534,42,0	1/1:1,11:12:33.11:420,33,0
chr10	5153558	.	A	AC	533.99	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-3.710;DP=529;FS=0.000;HRun=5;HaplotypeScore=53.4184;InbreedingCoeff=0.9394;MQ=73.07;MQ0=0;MQRankSum=0.476;QD=26.70;ReadPosRankSum=-4.005;VQSLOD=1.3676;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,99,1063	0/0:3,0:3:9.02:0,9,97	0/0:10,0:10:25.44:0,25,257	0/0:14,0:14:39.07:0,39,397	0/0:8,0:8:24.06:0,24,257	0/0:27,0:27:78.16:0,78,826	0/0:35,0:35:99:0,102,1078	1/1:4,16:20:48.16:629,48,0	0/0:16,0:16:36.09:0,36,387	0/0:15,0:15:39.10:0,39,419	0/0:10,0:9:24.06:0,24,258	0/0:16,0:16:45.11:0,45,483	0/0:25,0:25:72.15:0,72,761	0/0:19,0:19:57.14:0,57,612	0/0:14,0:14:36.09:0,36,387	0/0:22,0:22:60.15:0,60,645	0/0:32,0:32:93.23:0,93,998	0/0:17,0:16:39.10:0,39,419	0/0:27,0:27:78.20:0,78,838	0/0:14,0:14:39.10:0,39,418	0/0:34,0:34:87.21:0,87,935	0/0:12,0:12:33.08:0,33,354	0/0:14,0:14:42.11:0,42,450	0/0:20,0:20:51.13:0,51,548	0/0:18,0:18:54.14:0,54,580	0/0:25,0:25:72.18:0,72,773	0/0:15,0:15:45.09:0,45,473	0/0:13,0:13:39.10:0,39,419
chr10	5160509	.	G	GA	7983.98	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=14.843;DP=695;FS=0.000;HRun=4;HaplotypeScore=89.3081;InbreedingCoeff=0.9993;MQ=83.53;MQ0=0;MQRankSum=-2.644;QD=32.99;ReadPosRankSum=4.521;VQSLOD=5.0551;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,43:44:99:1600,123,0	0/0:11,0:11:21.03:0,21,226	0/0:34,0:34:79.29:0,79,855	0/0:27,0:27:67.06:0,67,744	0/0:20,0:20:57.16:0,57,646	0/0:23,0:23:60.13:0,60,658	0/0:24,0:24:69.17:0,69,761	0/0:34,0:34:54.63:0,55,342	0/0:27,0:27:78.21:0,78,874	0/0:26,0:26:75.20:0,75,841	0/0:22,0:22:63.18:0,63,714	0/0:22,0:22:63.15:0,63,695	0/0:19,0:19:57.16:0,57,645	0/0:28,0:28:75.21:0,75,851	1/1:3,26:28:69.22:890,69,0	1/1:2,28:30:77.90:1000,78,0	1/1:1,32:33:78.25:1013,78,0	1/1:2,11:13:33.11:428,33,0	0/0:17,0:17:48.13:0,48,536	0/0:23,0:23:69.20:0,69,782	0/0:38,0:38:99:0,108,1210	0/0:20,0:20:54.15:0,54,612	0/0:18,0:18:51.14:0,51,578	0/0:20,0:20:54.15:0,54,612	1/1:1,16:17:42.14:545,42,0	1/1:3,20:23:32.16:765,32,0	1/1:7,23:31:71.98:883,72,0	1/1:0,22:22:66.21:858,66,0
chr10	5162237	.	GA	G	9088.84	PASS	AB=0.532;AC=19;AF=0.339;AN=56;BaseQRankSum=13.651;DP=687;FS=28.163;HRun=4;HaplotypeScore=70.2412;InbreedingCoeff=0.9252;MQ=88.11;MQ0=0;MQRankSum=-4.024;QD=32.69;ReadPosRankSum=2.721;VQSLOD=2.8954;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,46:48:99:1584,132,0	0/0:10,0:10:30.10:0,30,420	0/0:23,0:23:57.19:0,57,787	0/0:25,0:25:71.45:0,71,954	0/0:16,0:16:39.12:0,39,524	0/0:17,0:17:48.15:0,48,656	0/0:34,0:34:93.31:0,93,1302	1/1:2,29:31:84.26:1008,84,0	0/0:27,0:27:81.25:0,81,1101	0/0:31,0:31:87.28:0,87,1203	0/0:16,0:16:45.15:0,45,630	0/0:26,0:26:69.23:0,69,966	0/0:21,0:21:60.20:0,60,837	0/0:20,0:20:54.16:0,54,724	1/1:0,25:25:69.21:828,69,0	1/1:1,18:19:48.15:576,48,0	1/1:1,26:27:72.22:862,72,0	1/1:1,27:28:81.21:956,81,0	0/0:20,0:20:54.18:0,54,756	0/0:15,0:15:42.11:0,42,554	0/0:45,0:45:99:0,132,1797	0/0:12,0:12:36.11:0,36,488	0/0:12,0:12:33.10:0,33,445	0/0:39,0:39:99:0,117,1578	1/1:0,26:26:69.21:828,69,0	0/1:3,22:25:11.83:719,0,12	1/1:1,27:28:81.25:972,81,0	1/1:0,21:21:63.19:756,63,0
chr10	5162668	.	TGAGAATATA	T	11284.47	PASS	AB=0.512;AC=17;AF=0.304;AN=56;BaseQRankSum=15.641;DP=502;FS=3.350;HRun=0;HaplotypeScore=153.8080;InbreedingCoeff=0.9137;MQ=82.26;MQ0=0;MQRankSum=-15.561;QD=86.14;ReadPosRankSum=1.515;VQSLOD=5.2775;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,123,5885	0/0:7,0:7:21.04:0,21,920	0/0:21,0:21:60.12:0,60,2415	0/0:19,0:18:21.83:0,22,2007	0/0:17,0:17:51.18:0,51,2335	0/0:14,0:14:42.14:0,42,1835	0/0:27,0:27:81.28:0,81,3920	1/1:0,16:16:45.14:1394,45,0	0/0:18,0:18:54.19:0,54,2706	0/0:20,0:20:57.19:0,57,2680	0/0:18,0:18:54.17:0,54,2567	0/0:21,0:21:63.20:0,63,2822	0/0:18,0:18:54.19:0,54,2694	0/0:14,0:14:42.13:0,42,1755	1/1:0,17:17:48.16:1549,48,0	0/1:1,20:21:87.68:1890,0,88	1/1:0,14:14:33.05:993,33,0	1/1:0,13:13:30.10:978,30,0	0/0:22,0:22:66.23:0,66,3131	0/0:17,0:17:51.16:0,51,2347	0/0:25,0:25:72.25:0,72,3435	0/0:11,0:11:33.11:0,33,1629	0/0:10,0:10:30.09:0,30,1334	0/0:31,0:31:90.76:0,91,4367	1/1:0,13:13:39.13:1263,39,0	1/1:0,15:15:42.14:1368,42,0	1/1:1,13:14:32.77:1075,33,0	1/1:0,8:8:24.08:775,24,0
chr10	5162832	.	G	GTAGA	2144.36	PASS	AB=0.667;AC=11;AF=0.220;AN=50;BaseQRankSum=-5.761;DP=509;FS=0.698;HRun=0;HaplotypeScore=79.3018;InbreedingCoeff=0.7393;MQ=72.14;MQ0=5;MQRankSum=1.192;QD=15.88;ReadPosRankSum=-2.259;VQSLOD=2.7130;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:26:9.90:134,10,0	0/0:3,0:3:2.99:0,3,23	./.	./.	0/0:14,0:14:33.10:0,33,492	1/1:6,7:14:12.04:283,12,0	0/0:9,7:17:3:0,3,27	0/0:28,0:25:0:0,0,0	0/0:24,0:24:33.10:0,33,488	0/0:15,0:15:27.05:0,27,344	0/0:14,0:14:21.02:0,21,260	0/0:19,0:19:36.08:0,36,495	0/0:13,0:13:19.22:0,19,172	0/0:12,0:12:15.02:0,15,189	1/1:14,7:22:21.07:495,21,0	0/1:15,15:30:25.74:403,0,26	0/0:7,0:16:12.01:0,12,112	1/1:16,8:24:42.03:777,42,0	0/0:24,0:21:21.06:0,21,289	0/0:18,0:18:30.05:0,30,401	0/0:27,0:29:51.10:0,51,685	0/0:5,0:5:12.01:0,12,142	0/0:14,0:14:27.08:0,27,395	0/0:20,0:20:36.08:0,36,493	1/1:10,9:19:9.03:213,9,0	0/0:16,0:16:24.02:0,24,308	0/0:29,0:29:27.04:0,27,353	./.
chr10	5162869	.	T	TAGATAGAC	572.55	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=6.986;DP=508;FS=0.000;HRun=0;HaplotypeScore=117.1210;InbreedingCoeff=0.1407;MQ=62.93;MQ0=8;MQRankSum=-1.821;QD=4.62;ReadPosRankSum=4.012;VQSLOD=1.9303;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,22:25:7.70:230,8,0	0/0:5,0:5:14.99:0,15,147	0/0:19,0:17:44.64:0,45,416	0/0:14,0:14:18.11:0,18,251	0/0:23,0:23:66.03:0,66,1146	0/1:20,0:20:35.03:35,0,225	0/0:16,0:16:20.48:0,20,195	0/0:24,0:20:56.78:0,57,481	0/0:19,0:19:57.08:0,57,1003	0/0:18,0:18:50.32:0,50,717	0/0:20,0:20:59.95:0,60,730	0/0:27,0:27:78.04:0,78,1215	0/0:15,0:15:43.19:0,43,544	0/0:17,0:17:50.90:0,51,593	0/1:20,0:19:94.84:95,0,155	0/1:23,0:23:83.95:84,0,174	0/0:13,0:13:23.97:0,24,351	0/1:22,0:22:91.61:221,0,92	0/0:17,0:15:34.26:0,34,595	0/0:21,0:21:60.01:0,60,935	0/0:32,0:32:87.08:0,87,1547	0/0:12,0:12:35.98:0,36,431	0/0:15,0:15:39.06:0,39,798	0/0:20,0:20:60.05:0,60,1052	0/1:14,0:14:39:39,0,78	0/0:12,0:12:33:0,33,581	0/0:18,0:18:44.95:0,45,715	0/0:7,0:7:20.94:0,21,166
chr10	5165328	.	AT	A	700.74	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.607;DP=685;FS=1.296;HRun=9;HaplotypeScore=68.3757;InbreedingCoeff=0.9459;MQ=64.97;MQ0=1;MQRankSum=0.884;QD=20.61;ReadPosRankSum=-5.278;VQSLOD=1.8925;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,138,1568	0/0:12,0:12:30.08:0,30,337	0/0:22,1:17:15.83:0,16,253	0/0:23,0:22:16.70:0,17,219	0/0:31,2:33:32.31:0,32,863	0/0:23,0:24:66.02:0,66,732	0/0:23,0:23:57.15:0,57,648	1/1:5,29:34:87.03:796,87,0	0/0:21,0:21:63.18:0,63,719	0/0:20,0:20:48.14:0,48,546	0/0:19,1:20:17.69:0,18,457	0/0:25,0:25:63.19:0,63,727	0/0:23,0:23:66.18:0,66,751	0/0:20,0:20:51.15:0,51,589	0/0:27,1:29:50.58:0,51,808	0/0:30,0:30:87.25:0,87,995	0/0:25,0:25:69.19:0,69,786	0/0:28,0:28:74.71:0,75,840	0/0:20,1:22:13.27:0,13,611	0/0:26,0:26:69.18:0,69,778	0/0:26,0:26:78.23:0,78,900	0/0:19,0:19:51.15:0,51,589	0/0:15,0:15:42.12:0,42,485	0/0:24,0:24:63.19:0,63,727	0/0:16,0:16:39.12:0,39,450	0/0:32,0:32:78.21:0,78,872	0/0:23,1:23:41.71:0,42,719	0/0:19,0:19:54.14:0,54,607
chr10	5168261	.	C	CGT	5169.69	PASS	AB=0.816;AC=16;AF=0.286;AN=56;BaseQRankSum=10.006;DP=741;FS=3.490;HRun=0;HaplotypeScore=134.3843;InbreedingCoeff=0.7924;MQ=66.06;MQ0=3;MQRankSum=-0.677;QD=22.00;ReadPosRankSum=-0.791;VQSLOD=4.9215;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:84.14:0,84,963	0/0:12,0:13:32.89:0,33,355	0/0:37,0:25:3.66:0,4,217	0/0:41,0:20:23.66:0,24,225	0/0:14,0:14:29.98:0,30,337	0/0:19,0:19:51.11:0,51,584	0/0:29,0:29:66.13:0,66,755	1/1:21,1:34:51.57:579,52,0	0/0:21,0:22:53.90:0,54,578	0/0:18,0:19:49.90:0,50,522	0/0:10,0:12:28.88:0,29,281	0/0:26,0:26:66.13:0,66,776	0/0:19,0:19:56.99:0,57,648	0/0:27,0:27:75.15:0,75,887	1/1:22,0:22:11.68:460,12,0	0/1:21,0:21:77.14:496,0,77	0/1:18,25:42:19.87:1060,0,20	1/1:32,0:32:63:660,63,0	0/0:25,0:26:50.83:0,51,512	0/0:19,0:19:39.09:0,39,449	0/0:65,0:66:99:0,165,1921	0/0:20,0:20:47.97:0,48,500	0/0:12,0:12:21.01:0,21,228	0/0:42,0:42:99:0,108,1275	1/1:22,0:22:45.10:493,45,0	1/1:28,0:27:65.79:669,66,0	1/1:22,0:22:20.55:541,21,0	1/1:11,0:11:18.05:213,18,0
chr10	5168281	.	CGT	C	3767.80	PASS	AB=0.856;AC=17;AF=0.304;AN=56;BaseQRankSum=12.236;DP=750;FS=0.750;HRun=0;HaplotypeScore=136.0335;InbreedingCoeff=0.7511;MQ=54.37;MQ0=14;MQRankSum=-0.657;QD=15.57;ReadPosRankSum=4.664;VQSLOD=3.8099;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,0:46:62.17:308,62,0	0/0:12,0:12:35.79:0,36,538	0/0:54,0:13:4.29:0,4,138	0/0:49,0:12:5.86:0,6,133	0/0:13,0:13:30.07:0,30,436	0/1:16,1:17:1.34:1,0,479	0/0:23,0:23:57.18:0,57,894	0/0:25,0:25:14.92:0,15,37	0/0:21,1:22:13.14:0,13,733	0/0:19,0:20:42.11:0,42,587	0/0:13,0:13:23.80:0,24,329	0/1:22,1:23:8.01:8,0,717	0/0:21,0:21:54.15:0,54,825	0/0:33,0:33:93.28:0,93,1420	1/1:4,15:21:32.93:377,33,0	0/1:11,9:22:4.74:360,0,5	0/0:42,0:41:57.71:0,58,178	1/1:1,24:29:65.97:766,66,0	0/0:21,0:21:10.72:0,11,535	0/0:15,0:15:33.11:0,33,538	0/0:71,2:73:10.87:0,11,2419	0/0:17,0:17:39.09:0,39,555	0/0:13,0:13:24.06:0,24,365	0/0:40,2:42:18.37:0,18,1298	1/1:1,18:21:39.12:486,39,0	1/1:4,23:27:74.63:808,75,0	1/1:3,18:24:44.89:504,45,0	1/1:2,8:10:12.04:150,12,0
chr10	5168288	.	GT	G	1941.31	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=8.684;DP=746;FS=8.433;HRun=1;HaplotypeScore=128.5660;InbreedingCoeff=0.6497;MQ=55.35;MQ0=15;MQRankSum=-0.531;QD=17.98;ReadPosRankSum=1.165;VQSLOD=3.3685;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:48,0:48:19.83:20,0,66	0/0:12,0:12:36.12:0,36,573	0/0:50,0:10:21.06:0,21,297	0/0:51,0:12:29.97:0,30,380	0/0:15,0:15:45.15:0,45,679	0/0:16,0:16:43.03:0,43,653	0/0:21,0:21:63.20:0,63,973	1/1:0,19:19:54.18:735,54,0	0/0:23,0:23:60.67:0,61,925	0/0:21,0:21:60.15:0,60,870	0/0:13,0:13:30.06:0,30,450	0/0:27,0:27:72.52:0,73,1032	0/0:23,0:23:69.23:0,69,1052	0/0:33,0:33:96.33:0,96,1534	0/0:18,0:18:5.15:0,5,46	0/0:18,0:18:10.17:0,10,119	1/1:1,40:41:99:1315,104,0	0/0:30,0:30:14.83:0,15,132	0/0:22,0:22:64.04:0,64,907	0/0:15,0:15:42.14:0,42,643	0/0:73,0:73:99:0,196,2924	0/0:18,0:18:54.18:0,54,833	0/0:14,0:14:39.13:0,39,583	0/0:38,0:38:99:0,109,1654	0/0:21,0:21:9.12:0,9,42	0/0:35,0:33:28.83:0,29,248	0/0:22,0:22:8.17:0,8,45	0/0:9,0:9:3.44:0,3,9
chr10	5168435	.	GGTGT	G	1498.12	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.689;DP=727;FS=4.748;HRun=0;HaplotypeScore=132.0926;InbreedingCoeff=0.9999;MQ=91.40;MQ0=0;MQRankSum=-5.921;QD=53.50;ReadPosRankSum=-3.800;VQSLOD=3.7207;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,138,3518	0/0:13,0:13:36.12:0,36,1040	0/0:30,0:30:90.31:0,90,2450	0/0:29,0:29:87.26:0,87,2262	0/0:24,0:24:72.25:0,72,2078	0/0:24,0:24:72.25:0,72,2039	0/0:26,0:26:78.27:0,78,2183	1/1:1,27:28:84.24:1593,84,0	0/0:33,0:33:93.32:0,93,2641	0/0:26,0:26:78.26:0,78,2124	0/0:23,0:23:69.24:0,69,1974	0/0:31,0:31:90.31:0,90,2568	0/0:28,0:28:84.27:0,84,2325	0/0:31,0:31:93.32:0,93,2648	0/0:26,0:26:78.24:0,78,2060	0/0:26,0:26:78.27:0,78,2209	0/0:24,0:24:72.25:0,72,1987	0/0:19,0:19:57.16:0,57,1570	0/0:18,0:17:51.17:0,51,1400	0/0:24,0:24:72.25:0,72,2033	0/0:29,0:29:87.30:0,87,2454	0/0:23,0:23:69.24:0,69,1977	0/0:27,0:27:81.28:0,81,2305	0/0:24,0:24:72.25:0,72,1940	0/0:25,0:25:72.24:0,72,1962	0/0:25,0:25:75.26:0,75,2173	0/0:26,0:26:78.27:0,78,2223	0/0:17,0:17:51.18:0,51,1438
chr10	5171205	.	T	TG	915.03	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-7.833;DP=697;FS=0.749;HRun=4;HaplotypeScore=69.9356;InbreedingCoeff=0.9973;MQ=86.56;MQ0=0;MQRankSum=-1.702;QD=33.89;ReadPosRankSum=-3.626;VQSLOD=2.6229;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,123,1383	0/0:11,0:11:30.08:0,30,340	0/0:29,0:29:74.98:0,75,790	0/0:17,0:17:42.09:0,42,454	0/0:15,0:15:39.11:0,39,442	0/0:15,0:15:45.11:0,45,501	0/0:30,0:30:81.19:0,81,897	1/1:1,26:27:75.24:1010,75,0	0/0:32,0:32:90.26:0,90,1020	0/0:28,0:28:75.21:0,75,850	0/0:14,0:14:42.09:0,42,457	0/0:30,0:30:84.24:0,84,952	0/0:31,0:31:90.23:0,90,1001	0/0:33,0:33:90.26:0,90,1020	0/0:39,0:39:99:0,108,1225	0/0:26,0:26:72.17:0,72,796	0/0:28,0:28:84.21:0,84,940	0/0:23,0:23:66.19:0,66,749	0/0:14,0:14:42.12:0,42,476	0/0:22,0:22:57.16:0,57,646	0/0:47,0:47:99:0,135,1521	0/0:25,0:25:69.18:0,69,773	0/0:23,0:23:60.15:0,60,669	0/0:26,0:26:66.18:0,66,749	0/0:24,0:24:69.20:0,69,783	0/0:23,0:23:57.16:0,57,647	0/0:15,0:15:42.12:0,42,476	0/0:9,0:9:24.07:0,24,272
chr10	5172148	.	CGT	C	279.23	PASS	AB=0.963;AC=15;AF=0.288;AN=52;BaseQRankSum=2.139;DP=628;FS=5.122;HRun=0;HaplotypeScore=82.9452;InbreedingCoeff=-0.0966;MQ=58.50;MQ0=11;MQRankSum=0.193;QD=0.93;ReadPosRankSum=2.220;VQSLOD=1.2392;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:37,0:36:2.99:24,3,0	0/0:11,0:11:6:0,6,69	./.	./.	0/1:22,0:22:29.48:29,0,157	0/0:20,0:20:9.70:0,10,242	0/0:28,0:28:26.02:0,26,292	0/1:26,0:24:0:0,0,0	0/1:12,1:13:26.49:26,0,37	0/0:20,0:20:8.85:0,9,80	0/0:11,0:10:2.74:0,3,12	0/1:21,0:21:9.18:9,0,141	0/1:11,1:12:29.20:29,0,37	0/1:10,0:10:52.86:53,0,77	0/1:17,1:18:29.82:30,0,248	0/0:16,0:15:9.01:0,9,98	0/1:35,5:39:80.73:81,0,431	0/1:24,1:25:41.77:42,0,287	0/0:21,0:21:12:0,12,153	0/0:15,0:15:15:0,15,193	1/1:39,0:46:11.36:64,11,0	0/0:20,3:23:18.03:0,18,219	0/0:16,0:16:5.04:0,5,162	0/0:29,0:29:5.82:0,6,409	0/1:14,0:14:16.24:16,0,55	0/0:25,0:28:37.43:0,37,258	0/1:15,1:16:21.49:21,0,40	0/0:11,0:19:6.01:0,6,71
chr10	5173205	.	GCT	G	208.45	PASS	AB=0.971;AC=10;AF=0.179;AN=56;BaseQRankSum=1.085;DP=497;FS=1.939;HRun=0;HaplotypeScore=91.8266;InbreedingCoeff=-0.2829;MQ=63.47;MQ0=12;MQRankSum=3.101;QD=1.07;ReadPosRankSum=1.081;VQSLOD=1.7431;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:23:5.01:0,5,27	0/1:4,0:4:3.46:3,0,20	0/0:33,0:16:2.96:0,3,19	0/0:43,0:26:2.80:0,3,13	0/1:10,0:10:23.31:23,0,35	0/1:19,0:18:1.06:1,0,71	0/1:23,1:23:6.79:7,0,169	0/0:26,0:25:20.82:0,21,145	0/1:18,0:18:39.97:55,0,40	0/1:22,0:20:46.85:47,0,138	0/0:7,0:7:0.04:0,0,63	0/0:14,0:14:2.62:0,3,120	0/0:14,0:14:20.55:0,21,144	0/0:10,0:10:14.97:0,15,121	0/0:11,0:11:2.96:0,3,19	0/0:9,0:9:2.77:0,3,20	0/0:5,0:5:2.99:0,3,23	0/0:11,0:10:17.88:0,18,144	0/0:19,0:18:6.01:0,6,68	0/1:17,0:17:49.18:49,0,111	0/1:53,0:52:77.84:78,0,363	0/1:15,0:14:46.67:47,0,79	0/1:8,4:11:24.37:24,0,38	0/0:29,4:32:8.32:0,8,284	0/0:12,0:12:8.87:0,9,57	0/0:12,0:11:23.68:0,24,160	0/0:9,0:9:11.88:0,12,86	0/0:8,0:7:2.92:0,3,17
chr10	5173774	.	GCTACCTGTGCA	G	1624.42	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.108;DP=679;FS=3.120;HRun=0;HaplotypeScore=210.5625;InbreedingCoeff=0.9748;MQ=91.66;MQ0=0;MQRankSum=-7.286;QD=70.63;ReadPosRankSum=-1.749;VQSLOD=3.2411;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,21:23:57.15:1719,57,0	0/0:6,0:6:18.04:0,18,888	0/0:24,0:24:66.23:0,66,3492	0/0:32,0:32:84.26:0,84,3885	0/0:16,0:16:45.15:0,45,2554	0/0:19,0:19:57.20:0,57,3046	0/0:31,0:31:90.31:0,90,4951	0/0:27,0:27:78.25:0,78,3989	0/0:39,0:39:99:0,117,6373	0/0:26,0:26:75.25:0,75,3745	0/0:9,0:9:27.08:0,27,1194	0/0:30,0:30:87.30:0,87,4489	0/0:37,0:37:99:0,108,6172	0/0:25,0:25:72.25:0,72,3959	0/0:37,0:37:99:0,108,6117	0/0:21,0:21:63.22:0,63,3621	0/0:37,0:36:99:0,111,6093	0/0:23,0:23:66.19:0,66,3450	0/0:27,0:27:75.21:0,75,3678	0/0:16,0:16:45.15:0,45,2337	0/0:43,0:43:99:0,126,6942	0/0:22,0:22:63.22:0,63,3442	0/0:9,0:9:27.09:0,27,1482	0/0:23,0:23:69.22:0,69,3669	0/0:20,0:20:60.21:0,60,3278	0/0:27,0:27:78.27:0,78,4485	0/0:25,0:25:72.25:0,72,3842	0/0:5,0:5:15.05:0,15,740
chr10	5174461	.	G	GT	1487.23	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.393;DP=798;FS=0.586;HRun=6;HaplotypeScore=80.6614;InbreedingCoeff=0.9994;MQ=76.57;MQ0=0;MQRankSum=-3.221;QD=28.06;ReadPosRankSum=1.499;VQSLOD=4.1834;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,47:53:99:1582,126,0	0/0:17,0:17:42.07:0,42,421	0/0:15,0:15:32.86:0,33,303	0/0:29,0:28:69.09:0,69,676	0/0:22,0:22:54.11:0,54,551	0/0:24,0:24:72.16:0,72,735	0/0:29,0:29:78.16:0,78,789	0/0:34,0:34:75.13:0,75,756	0/0:25,0:25:72.16:0,72,734	0/0:32,0:32:81.15:0,81,823	0/0:15,0:15:39.09:0,39,397	0/0:34,0:34:93.16:0,93,926	0/0:26,0:26:66.12:0,66,664	0/0:26,0:26:75.16:0,75,759	0/0:41,0:41:99:0,117,1193	0/0:32,0:32:81.16:0,81,819	0/0:30,0:30:75.14:0,75,756	0/0:25,0:25:69.14:0,69,696	0/0:22,0:22:63.11:0,63,633	0/0:24,0:24:63.14:0,63,643	0/0:46,0:46:99:0,132,1346	0/0:28,0:28:72.15:0,72,728	0/0:23,0:23:63.14:0,63,642	0/0:45,0:44:99:0,123,1248	0/0:21,0:21:63.14:0,63,642	0/0:32,0:32:75.16:0,75,765	0/0:37,0:35:90.06:0,90,917	0/0:11,0:11:33.07:0,33,336
chr10	5175382	.	G	GTGTAAGGA	3923.77	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.356;DP=716;FS=3.062;HRun=0;HaplotypeScore=181.5737;InbreedingCoeff=0.9999;MQ=88.51;MQ0=0;MQRankSum=-9.894;QD=93.42;ReadPosRankSum=-2.000;VQSLOD=3.6296;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,27:42:99:3924,105,0	0/0:15,0:15:45.13:0,45,1230	0/0:35,0:35:94.56:0,95,2564	0/0:19,0:19:51.13:0,51,1431	0/0:22,0:22:66.23:0,66,1959	0/0:17,0:17:51.17:0,51,1438	0/0:34,0:34:99:0,102,2991	0/0:18,0:18:54.17:0,54,1523	0/0:23,0:23:66.23:0,66,1939	0/0:28,0:28:81.26:0,81,2381	0/0:13,0:13:39.13:0,39,1139	0/0:17,0:17:51.18:0,51,1544	0/0:29,0:29:87.28:0,87,2403	0/0:24,0:24:72.23:0,72,1968	0/0:26,0:26:75.24:0,75,2128	0/0:24,0:24:72.25:0,72,2083	0/0:50,0:50:99:0,150,4416	0/0:23,0:23:60.21:0,60,1728	0/0:22,0:22:66.23:0,66,1803	0/0:28,0:28:78.27:0,78,2361	0/0:42,0:42:99:0,120,3561	0/0:26,0:26:78.27:0,78,2352	0/0:23,0:23:66.23:0,66,1997	0/0:31,0:31:93.29:0,93,2563	0/0:19,0:19:54.16:0,54,1509	0/0:27,0:27:78.26:0,78,2236	0/0:19,0:17:54.19:0,54,1634	0/0:20,0:20:60.21:0,60,1779
chr10	5176592	.	A	AAC	451.47	PASS	AB=0.760;AC=12;AF=0.214;AN=56;BaseQRankSum=10.171;DP=514;FS=5.581;HRun=0;HaplotypeScore=79.1645;InbreedingCoeff=0.5556;MQ=67.56;MQ0=17;MQRankSum=-1.943;QD=3.30;ReadPosRankSum=-0.661;VQSLOD=1.0019;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:25:39.90:245,40,0	0/0:7,0:7:17.85:0,18,243	0/0:28,0:23:69.15:0,69,1031	0/0:28,0:20:28.77:0,29,749	0/0:13,0:13:29.36:0,29,448	0/0:24,0:23:57.09:0,57,839	0/0:20,0:19:50.99:0,51,744	0/0:22,0:19:60.16:0,60,850	0/0:10,0:10:30.10:0,30,473	0/0:14,0:14:42.14:0,42,651	0/0:13,0:13:30.07:0,30,419	0/0:18,0:18:45.14:0,45,681	0/0:20,0:20:56.85:0,57,814	0/0:16,0:16:42.04:0,42,644	1/1:13,0:13:13.96:75,14,0	0/0:2,0:16:10.98:0,11,54	1/1:19,1:25:16.05:66,16,0	0/1:12,9:20:44.86:69,0,45	0/0:13,0:12:33.08:0,33,486	0/0:18,0:18:33.11:0,33,481	0/0:48,0:46:99:0,123,1849	0/0:11,0:11:27.09:0,27,418	0/0:13,0:13:27.09:0,27,382	0/0:25,0:25:66.22:0,66,1024	1/1:12,1:13:8.33:54,8,0	0/1:12,0:11:29.39:29,0,38	0/1:6,6:12:9.73:44,0,10	0/1:7,5:13:27.16:39,0,27
chr10	5177809	.	A	AT	2642.99	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-4.851;DP=812;FS=3.603;HRun=2;HaplotypeScore=75.4809;InbreedingCoeff=0.9996;MQ=81.79;MQ0=0;MQRankSum=-2.204;QD=35.24;ReadPosRankSum=1.054;VQSLOD=4.1652;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,40:42:99:1555,108,0	0/0:11,0:11:33.10:0,33,409	0/0:23,0:23:54.02:0,54,585	0/0:21,0:21:30.49:0,30,505	0/0:29,0:29:87.27:0,87,1077	0/0:30,0:30:90.27:0,90,1102	0/0:34,0:34:99:0,102,1235	0/0:40,0:40:99:0,117,1411	0/0:34,0:34:99:0,99,1227	0/0:31,0:31:90.28:0,90,1116	0/0:26,0:26:75.24:0,75,929	0/0:29,0:29:84.25:0,84,1029	0/0:35,0:35:99:0,105,1302	0/0:20,0:20:60.19:0,60,744	0/0:34,0:34:99:0,102,1265	0/0:34,0:34:99:0,99,1215	1/1:1,32:33:84.28:1210,84,0	0/0:18,0:18:51.16:0,51,632	0/0:23,0:23:63.18:0,63,760	0/0:28,0:28:81.25:0,81,1004	0/0:35,0:35:99:0,102,1239	0/0:24,0:24:69.22:0,69,855	0/0:24,0:24:72.23:0,72,893	0/0:29,0:29:87.23:0,87,1060	0/0:24,0:24:69.22:0,69,855	0/0:42,0:42:99:0,126,1550	0/0:42,0:42:99:0,117,1450	0/0:17,0:17:51.16:0,51,631
chr10	5178407	.	A	AGT	6636.84	PASS	AB=0.666;AC=11;AF=0.196;AN=56;BaseQRankSum=-13.393;DP=1118;FS=3.401;HRun=0;HaplotypeScore=175.2571;InbreedingCoeff=0.5329;MQ=72.28;MQ0=11;MQRankSum=-2.283;QD=19.81;ReadPosRankSum=2.991;VQSLOD=5.0183;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:64,0:64:99:0,101,1355	0/0:18,0:19:47.63:0,48,544	0/0:88,0:38:16.46:0,16,385	0/1:89,0:43:0.36:0,0,208	0/0:26,0:29:50.71:0,51,515	0/0:21,0:21:41.30:0,41,469	0/0:29,0:38:61.81:0,62,547	0/0:50,0:51:86.67:0,87,931	0/0:50,0:51:99:0,104,1221	0/0:27,0:29:44.63:0,45,466	0/0:22,0:23:53.74:0,54,610	0/0:41,0:43:74.88:0,75,840	0/0:28,0:31:62.62:0,63,740	0/0:30,0:34:68.52:0,69,716	1/1:16,47:64:99:1964,126,0	0/1:16,32:49:97.96:1213,0,98	0/0:30,0:30:54.14:0,54,625	1/1:13,18:31:45.14:687,45,0	0/0:22,0:24:19.04:0,19,383	0/0:25,0:27:56.83:0,57,629	0/0:78,0:83:99:0,149,1670	0/0:25,0:28:53.81:0,54,583	0/0:21,0:22:47.96:0,48,533	0/0:40,0:45:99:0,101,1083	0/1:8,19:28:13.44:748,0,13	1/1:17,16:32:60.20:926,60,0	0/1:7,12:19:2.21:440,0,2	0/1:3,16:19:19.51:659,0,20
chr10	5178456	.	T	TGA	4028.26	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.758;DP=967;FS=0.000;HRun=0;HaplotypeScore=177.8481;InbreedingCoeff=0.9999;MQ=64.18;MQ0=4;MQRankSum=-1.744;QD=50.35;ReadPosRankSum=2.698;VQSLOD=3.4691;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,47:50:99:2453,123,0	0/0:18,0:18:51.12:0,51,771	0/0:53,0:36:87.56:0,88,1241	0/0:71,0:52:96.35:0,96,1503	0/0:31,0:31:86.79:0,87,1302	0/0:21,0:21:41.17:0,41,839	0/0:32,0:32:90.29:0,90,1437	0/0:32,0:32:96.28:0,96,1435	0/0:36,0:37:96.23:0,96,1511	0/0:24,0:24:69.16:0,69,1028	0/0:21,0:21:63.13:0,63,881	0/0:31,0:31:87.27:0,87,1365	0/0:34,0:34:96.24:0,96,1431	0/0:31,0:31:87.25:0,87,1343	0/0:49,0:49:99:0,115,1899	0/0:43,0:43:99:0,111,1748	1/1:0,30:29:78.27:1576,78,0	0/0:28,0:28:72.25:0,72,1163	0/0:15,0:15:39.11:0,39,588	0/0:29,0:29:84.16:0,84,1241	0/0:87,0:87:99:0,221,3494	0/0:32,0:32:90.22:0,90,1303	0/0:19,0:19:48:0,48,723	0/0:58,0:58:99:0,171,2583	0/0:30,0:30:63.19:0,63,979	0/0:23,0:23:69.16:0,69,1035	0/0:18,0:18:36.09:0,36,557	0/0:17,0:17:51.12:0,51,797
chr10	5178505	.	G	GGTGTGT	5552.22	PASS	AB=0.791;AC=19;AF=0.352;AN=54;BaseQRankSum=0.718;DP=817;FS=6.546;HRun=0;HaplotypeScore=213.0536;InbreedingCoeff=0.8878;MQ=56.47;MQ0=18;MQRankSum=-6.974;QD=20.41;ReadPosRankSum=-5.550;VQSLOD=2.9431;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:30,6:40:34.81:852,35,0	0/0:9,0:10:23.93:0,24,406	./.	0/0:33,0:20:11.97:0,12,182	0/0:26,0:26:36.56:0,37,596	0/0:16,0:21:39.13:0,39,689	0/0:26,0:28:44.27:0,44,826	1/1:33,0:32:33.09:564,33,0	0/0:27,0:32:66.04:0,66,1237	0/0:26,0:25:39.33:0,39,656	0/0:17,0:18:36.12:0,36,698	0/0:23,0:26:39.07:0,39,663	0/0:29,0:29:41.94:0,42,701	0/0:27,0:28:54.17:0,54,1040	1/1:23,8:38:65.41:1336,65,0	1/1:21,2:24:16.64:417,17,0	0/1:24,0:31:0.24:0,0,251	1/1:17,0:20:3.84:83,4,0	0/0:18,0:20:21.96:0,22,537	0/0:21,0:27:54.18:0,54,965	0/0:69,0:70:56.48:0,56,1251	0/0:33,0:33:60.15:0,60,1137	0/0:20,0:20:33.07:0,33,600	0/0:59,0:60:99:0,100,1867	1/1:14,4:19:1.35:383,1,0	1/1:8,8:19:30.10:582,30,0	1/1:6,14:20:18.06:584,18,0	1/1:14,3:18:30.09:750,30,0
chr10	5178946	.	TTCTCTCTC	T	1325.73	PASS	AB=0.907;AC=12;AF=0.222;AN=54;BaseQRankSum=3.318;DP=552;FS=0.000;HRun=0;HaplotypeScore=130.8097;InbreedingCoeff=0.5996;MQ=65.09;MQ0=7;MQRankSum=-5.658;QD=10.36;ReadPosRankSum=1.193;VQSLOD=2.4709;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:25:6.02:98,6,0	0/0:8,0:8:6:0,6,154	./.	0/0:26,0:12:3:0,3,28	0/0:18,0:18:12.04:0,12,413	0/0:18,0:21:18.88:0,19,534	0/0:16,0:22:9.02:0,9,189	0/0:30,0:30:15.05:0,15,468	0/0:14,0:15:8.81:0,9,246	0/0:17,0:17:18.53:0,19,631	0/0:20,0:19:11.63:0,12,465	0/0:14,0:23:18.05:0,18,493	0/0:21,0:32:32.97:0,33,777	0/0:13,0:18:9.03:0,9,294	1/1:12,10:22:18.02:390,18,0	0/0:16,0:16:15.05:0,15,489	0/0:10,0:9:0:0,0,0	0/1:9,0:10:7.05:87,0,7	0/0:19,0:18:25.85:0,26,664	0/0:11,0:12:5.59:0,6,177	0/0:25,0:25:15.05:0,15,521	0/0:27,0:27:23.66:0,24,700	0/0:14,0:14:8.64:0,9,194	0/0:15,0:24:11.99:0,12,320	1/1:10,6:16:12.04:280,12,0	0/1:17,2:19:88.82:89,0,109	1/1:20,7:27:18.44:392,18,0	1/1:3,5:8:6.02:150,6,0
chr10	5179044	.	GT	G	562.14	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=7.274;DP=545;FS=16.851;HRun=1;HaplotypeScore=57.3724;InbreedingCoeff=0.8105;MQ=59.74;MQ0=3;MQRankSum=-6.002;QD=11.47;ReadPosRankSum=-2.512;VQSLOD=-0.0225;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,20:20:36.11:430,36,0	0/0:4,0:4:12.04:0,12,192	0/1:21,0:8:3.61:4,0,183	0/0:19,0:9:23.99:0,24,314	0/0:30,0:30:90.31:0,90,1439	0/0:15,0:15:45.15:0,45,720	0/0:24,0:24:72.25:0,72,1147	0/0:22,0:22:66.22:0,66,1047	0/0:27,0:27:81.26:0,81,1272	0/0:24,0:24:72.25:0,72,1152	0/0:7,0:7:21.07:0,21,336	0/0:21,0:21:63.21:0,63,1003	0/0:20,0:20:60.20:0,60,958	0/0:17,0:16:48.16:0,48,767	0/0:33,0:33:96.33:0,96,1535	0/0:30,0:30:90.29:0,90,1414	1/1:0,8:8:21.06:251,21,0	0/0:24,0:24:69.22:0,69,1079	0/0:22,0:20:60.18:0,60,915	0/0:12,0:12:36.12:0,36,576	0/0:14,0:14:42.14:0,42,668	0/0:16,0:16:48.16:0,48,767	0/0:20,0:20:60.20:0,60,955	0/0:27,0:27:81.28:0,81,1294	0/0:16,0:16:48.16:0,48,758	0/0:26,0:26:78.27:0,78,1234	0/0:20,0:20:60.20:0,60,959	0/0:6,0:6:12.04:0,12,191
chr10	5180131	.	A	ATG	6659.96	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-14.179;DP=687;FS=0.000;HRun=0;HaplotypeScore=85.1043;InbreedingCoeff=0.9995;MQ=68.55;MQ0=1;MQRankSum=0.185;QD=37.00;ReadPosRankSum=5.566;VQSLOD=6.9220;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:32:87.13:0,87,1126	0/0:12,0:12:36.11:0,36,478	0/0:26,0:23:57.05:0,57,737	0/0:17,0:15:33.07:0,33,403	0/0:41,0:41:99:0,111,1493	0/0:21,0:21:54.18:0,54,741	0/0:10,0:10:27.09:0,27,371	0/0:34,0:34:78.23:0,78,1017	0/0:30,0:30:81.27:0,81,1112	0/0:31,0:31:87.26:0,87,1146	0/0:26,0:26:69.22:0,69,931	0/0:15,0:15:39.13:0,39,536	0/0:16,0:16:33.10:0,33,437	0/0:12,0:12:30.10:0,30,412	1/1:2,38:40:84.29:1490,84,0	1/1:1,28:29:60.21:1065,60,0	0/0:26,0:26:60.17:0,60,804	1/1:3,14:17:29.97:494,30,0	0/0:17,0:17:48.15:0,48,646	0/0:36,0:36:99:0,105,1373	0/0:37,0:37:93.30:0,93,1261	0/0:20,0:20:54.16:0,54,713	0/0:21,0:21:51.17:0,51,699	0/0:26,0:26:62.98:0,63,827	1/1:2,22:25:36.59:640,37,0	1/1:2,21:24:41.62:1119,42,0	1/1:3,25:28:66.23:1161,66,0	1/1:1,16:17:39.13:691,39,0
chr10	5181427	.	C	CACAG	11499.18	PASS	AB=0.549;AC=16;AF=0.286;AN=56;BaseQRankSum=-16.210;DP=863;FS=11.479;HRun=0;HaplotypeScore=135.3043;InbreedingCoeff=0.8351;MQ=63.42;MQ0=11;MQRankSum=-0.365;QD=44.74;ReadPosRankSum=7.463;VQSLOD=4.3363;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,48:52:75.25:2072,75,0	0/0:22,0:22:66.15:0,66,1166	0/0:35,0:26:45.20:0,45,970	0/0:57,0:39:71.35:0,71,1270	0/0:26,0:26:75.26:0,75,1486	0/0:20,0:20:60.21:0,60,1197	0/0:24,0:24:57.04:0,57,1026	0/0:41,0:41:99:0,114,2059	0/0:29,0:29:81.26:0,81,1545	0/0:36,0:36:98.91:0,99,1903	0/0:24,0:24:66.18:0,66,1198	0/0:29,0:29:84.29:0,84,1675	0/0:26,0:26:75.24:0,75,1436	0/0:24,0:24:69.18:0,69,1256	1/1:2,28:33:39.13:1090,39,0	0/1:1,21:23:8.71:1290,0,9	0/1:7,21:29:58.56:708,0,59	1/1:3,13:16:20.28:745,20,0	0/0:23,0:22:57.14:0,57,980	0/0:36,0:36:99:0,105,1873	0/0:60,0:60:99:0,175,3316	0/0:38,0:38:99:0,111,2132	0/0:26,0:26:78.25:0,78,1508	0/0:30,0:30:84.25:0,84,1587	1/1:2,31:35:66.23:1819,66,0	1/1:2,27:28:81.28:2095,81,0	1/1:0,14:14:33.11:918,33,0	1/1:1,14:14:30.06:762,30,0
chr10	5183718	.	TCA	T	200.33	PASS	AB=0.939;AC=14;AF=0.269;AN=52;BaseQRankSum=1.600;DP=534;FS=9.078;HRun=0;HaplotypeScore=84.6131;InbreedingCoeff=-0.1510;MQ=59.47;MQ0=9;MQRankSum=2.272;QD=0.85;ReadPosRankSum=1.739;VQSLOD=0.5186;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:24:2.59:0,3,25	0/1:8,0:9:2.37:2,0,89	./.	./.	0/1:10,2:12:43.98:44,0,179	0/1:22,1:22:30.44:30,0,214	0/0:20,0:22:1.72:0,2,278	0/1:17,0:15:0:0,0,0	0/1:20,2:22:27.14:27,0,396	0/1:21,1:22:1.65:2,0,290	0/0:7,0:7:9.03:0,9,134	0/1:21,1:22:5.44:5,0,324	0/1:12,2:14:23.50:24,0,62	0/1:13,0:13:34.38:34,0,193	0/0:11,0:11:9:0,9,77	0/0:17,0:17:3:0,3,26	0/0:24,0:26:30.05:0,30,325	0/0:23,0:21:20.92:0,21,180	0/1:12,0:14:1.62:2,0,102	0/1:8,0:8:13.04:13,0,103	0/1:43,1:44:82.35:82,0,301	0/0:17,0:17:17.90:0,18,155	1/1:9,5:14:6.02:65,6,0	0/0:37,0:36:32.88:0,33,727	0/0:18,0:17:3.01:0,3,34	0/0:25,0:24:44.87:0,45,445	0/0:21,0:21:14.91:0,15,111	0/0:7,0:5:11.91:0,12,93
chr10	5183757	.	C	CACACACACACACACACAT	6755.65	PASS	AB=1.000;AC=16;AF=0.286;AN=56;BaseQRankSum=4.102;DP=638;FS=19.330;HRun=0;HaplotypeScore=286.4354;InbreedingCoeff=0.8066;MQ=57.92;MQ0=17;MQRankSum=-7.130;QD=31.13;ReadPosRankSum=-2.686;VQSLOD=1.9481;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:23:99:379,0,109	0/0:6,0:6:18.02:0,18,417	0/0:17,0:8:24.04:0,24,243	0/0:16,0:13:35.91:0,36,327	0/0:22,0:22:48.43:0,48,966	0/0:28,0:27:49.36:0,49,678	0/0:24,0:24:60.42:0,60,1254	0/0:26,0:23:45.20:0,45,406	0/0:27,0:27:66.09:0,66,1775	0/0:24,0:24:10.79:0,11,931	0/0:14,0:14:36.44:0,36,599	0/0:24,0:24:48.61:0,49,1236	0/0:10,0:10:16.26:0,16,315	0/0:23,0:23:53.73:0,54,861	1/1:8,0:20:12.91:807,13,0	1/1:8,0:19:14.34:551,14,0	0/1:26,0:25:48.84:49,0,339	1/1:21,0:20:47.14:1051,47,0	0/0:24,0:23:48.97:0,49,660	0/0:17,0:17:44.64:0,45,548	0/0:52,0:51:94.43:0,94,1441	0/0:24,0:24:39.16:0,39,311	0/0:11,0:11:24.44:0,24,409	0/0:32,0:30:75.76:0,76,2442	1/1:26,0:25:31.27:266,31,0	1/1:31,0:29:76.64:1410,77,0	1/1:8,17:32:23.79:1444,24,0	1/1:15,0:13:38.95:800,39,0
chr10	5184895	.	A	ATG	6903.69	PASS	AB=0.647;AC=16;AF=0.286;AN=56;BaseQRankSum=6.299;DP=755;FS=24.850;HRun=0;HaplotypeScore=112.9503;InbreedingCoeff=0.8169;MQ=59.84;MQ0=14;MQRankSum=-0.941;QD=28.29;ReadPosRankSum=2.477;VQSLOD=3.7882;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:19,21:37:66.35:1041,0,66	0/0:15,0:15:39.12:0,39,479	0/0:34,0:8:11.97:0,12,121	0/0:24,0:14:19.60:0,20,165	0/0:30,0:30:69.20:0,69,835	0/0:20,0:20:44.96:0,45,517	0/0:17,0:17:42.13:0,42,516	0/0:49,0:47:81.22:0,81,953	0/0:34,0:34:84.26:0,84,1033	0/0:36,0:35:86.93:0,87,1036	0/0:19,0:19:44.81:0,45,527	0/0:17,0:17:39.12:0,39,480	0/0:20,0:20:41.73:0,42,538	0/0:13,0:13:33.09:0,33,392	1/1:6,20:26:44.91:729,45,0	1/1:8,17:23:60.20:975,60,0	0/1:16,21:37:99:673,0,124	1/1:16,7:23:45.06:636,45,0	0/0:33,0:26:39.10:0,39,460	0/0:20,0:21:57:0,57,666	0/0:39,0:38:83.37:0,83,940	0/0:32,0:32:80.91:0,81,958	0/0:27,0:28:72.04:0,72,850	0/0:30,0:30:84.25:0,84,1020	1/1:15,13:28:26.61:903,27,0	1/1:16,11:27:54.18:834,54,0	1/1:11,13:24:17.17:758,17,0	1/1:10,4:13:24.05:354,24,0
chr10	5184945	.	CTG	C	2775.22	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=9.856;DP=848;FS=5.599;HRun=0;HaplotypeScore=154.7833;InbreedingCoeff=0.9667;MQ=50.70;MQ0=29;MQRankSum=1.598;QD=18.63;ReadPosRankSum=1.683;VQSLOD=3.9049;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:39:27.24:0,27,288	0/0:14,0:14:39.09:0,39,564	0/0:45,1:4:9.03:0,9,114	0/0:43,0:8:8.18:0,8,145	0/0:16,0:16:39.12:0,39,599	0/0:23,0:23:59.78:0,60,878	0/0:31,0:31:63.64:0,64,934	0/0:73,0:68:99:0,111,2044	0/0:31,0:31:73.91:0,74,1176	0/0:42,0:40:99:0,99,1537	0/0:20,0:20:45.15:0,45,727	0/0:21,0:21:44.05:0,44,665	0/0:22,0:23:45.52:0,46,779	0/0:20,0:20:51.13:0,51,777	1/1:12,13:25:30.06:373,30,0	1/1:12,16:28:45.58:533,46,0	0/0:36,0:37:53.62:0,54,1105	1/1:4,15:20:33.10:410,33,0	0/0:32,0:23:63.01:0,63,815	0/0:23,0:23:47.19:0,47,744	0/0:66,0:63:99:0,144,2150	0/0:23,0:23:56.61:0,57,771	0/0:30,1:31:30:0,30,1011	0/0:42,0:42:96.15:0,96,1402	1/1:12,11:23:42.13:522,42,0	1/1:13,13:23:54.15:642,54,0	1/1:8,11:19:10.11:280,10,0	1/1:2,6:8:18.04:211,18,0
chr10	5184971	.	GTA	G	202.74	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.158;DP=798;FS=4.237;HRun=0;HaplotypeScore=158.1391;InbreedingCoeff=0.8388;MQ=52.67;MQ0=32;MQRankSum=-3.688;QD=7.24;ReadPosRankSum=-4.773;VQSLOD=2.4434;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:17,11:28:25.42:296,25,0	0/0:9,0:9:26.70:0,27,395	0/0:25,0:4:4.54:0,5,81	0/0:32,0:6:10.99:0,11,131	0/0:14,0:14:42.14:0,42,797	0/0:28,0:28:78.13:0,78,1386	0/0:40,0:39:95.06:0,95,1504	0/0:71,0:65:99:0,131,2483	0/0:32,0:32:51.92:0,52,1247	0/0:41,0:38:89.07:0,89,1657	0/0:19,0:20:49.96:0,50,835	0/0:20,0:20:43.24:0,43,718	0/0:23,0:23:43.83:0,44,960	0/0:22,0:22:63.07:0,63,1057	0/0:24,0:24:47.98:0,48,650	0/0:27,0:27:51.10:0,51,608	0/0:36,0:36:70.86:0,71,1263	0/0:22,0:22:35.55:0,36,456	0/0:28,0:21:62.44:0,62,764	0/0:21,0:21:57.09:0,57,927	0/0:82,0:81:99:0,197,3467	0/0:19,0:19:45.14:0,45,820	0/0:27,0:27:73.43:0,73,1212	0/0:42,0:41:99:0,108,1817	0/0:21,0:21:31.56:0,32,447	0/0:26,0:20:53.49:0,53,665	0/0:11,0:11:20.76:0,21,225	0/0:7,0:7:17.97:0,18,196
chr10	5184975	.	GTGTGTA	G	67.12	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=5.932;DP=795;FS=3.535;HRun=0;HaplotypeScore=213.5763;InbreedingCoeff=0.6094;MQ=52.46;MQ0=31;MQRankSum=-6.528;QD=0.99;ReadPosRankSum=-5.146;VQSLOD=1.6139;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:24,7:30:15.95:154,16,0	0/0:8,0:8:15.05:0,15,396	0/0:28,0:4:9.01:0,9,125	0/1:37,0:8:11.92:12,0,94	0/0:14,0:14:39.13:0,39,1299	0/0:26,0:26:65.08:0,65,2027	0/0:36,0:35:89.82:0,90,2349	0/0:71,0:65:99:0,114,2796	0/0:32,0:32:72.71:0,73,2061	0/0:41,0:38:84.90:0,85,2324	0/0:18,0:18:47.75:0,48,1317	0/0:20,0:20:44.03:0,44,1260	0/0:22,0:22:53.39:0,53,1482	0/0:23,0:23:69.18:0,69,1632	0/0:26,0:26:50.06:0,50,1434	0/0:26,0:26:59.41:0,59,1820	0/0:36,0:36:77.33:0,77,2137	0/0:23,0:23:47.53:0,48,1310	0/0:23,0:18:41.86:0,42,1037	0/0:19,0:19:51.08:0,51,1576	0/0:83,0:82:99:0,188,5730	0/0:17,0:17:45.10:0,45,1221	0/0:26,0:26:63.03:0,63,1721	0/0:42,0:41:99:0,101,3102	0/0:21,0:21:42.14:0,42,1320	0/0:28,0:22:53.96:0,54,1351	0/0:11,0:11:24.08:0,24,750	0/0:7,0:7:15.05:0,15,510
chr10	5185025	.	GTA	G	192.86	PASS	AB=0.943;AC=5;AF=0.089;AN=56;BaseQRankSum=9.407;DP=969;FS=5.354;HRun=0;HaplotypeScore=171.7754;InbreedingCoeff=0.3060;MQ=51.39;MQ0=44;MQRankSum=-2.035;QD=1.65;ReadPosRankSum=-5.148;VQSLOD=0.6416;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:56,0:54:14.38:200,14,0	0/0:9,0:8:21.06:0,21,349	0/0:62,0:9:23.04:0,23,191	0/0:70,0:9:16.80:0,17,294	0/0:22,0:20:53.81:0,54,901	0/0:23,0:23:59.39:0,59,948	0/0:51,0:50:99:0,129,1906	0/0:51,0:47:76.43:0,76,1278	0/0:43,0:43:99:0,110,2126	0/0:38,0:35:69.09:0,69,1370	0/0:24,0:23:66.17:0,66,1111	0/0:32,0:30:57.65:0,58,1098	0/0:20,0:20:21.81:0,22,732	0/0:23,0:23:62.69:0,63,955	0/0:26,0:26:17.85:0,18,512	0/0:35,0:34:34.88:0,35,710	0/0:37,0:37:53.43:0,53,1228	0/1:20,2:21:41.48:41,0,202	0/0:33,0:26:41.07:0,41,768	0/0:25,0:25:41.26:0,41,861	0/0:102,0:102:99:0,178,3728	0/0:18,0:18:54.13:0,54,906	0/0:19,0:19:53.45:0,53,786	0/0:48,0:46:79.59:0,80,1664	0/1:19,2:21:17.89:18,0,264	0/0:37,0:34:29.60:0,30,639	0/1:18,0:16:53.72:54,0,119	0/0:3,0:2:5.99:0,6,48
chr10	5185027	.	ATG	A	542.97	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.005;DP=975;FS=0.679;HRun=0;HaplotypeScore=168.8377;InbreedingCoeff=0.8045;MQ=50.83;MQ0=45;MQRankSum=1.691;QD=9.70;ReadPosRankSum=-1.716;VQSLOD=3.1932;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,43:54:55.42:637,55,0	0/0:9,0:8:18.06:0,18,269	0/0:63,0:9:18.03:0,18,209	0/0:71,0:7:15.93:0,16,246	0/0:20,0:18:48.15:0,48,740	0/0:23,0:23:47.81:0,48,713	0/0:52,0:51:99:0,102,1473	0/0:50,0:46:28.41:0,28,797	0/0:43,0:43:83.86:0,84,1746	0/0:40,0:36:48.06:0,48,1164	0/0:25,0:24:63.20:0,63,977	0/0:33,0:31:65.13:0,65,1020	0/0:19,1:20:13.77:0,14,625	0/0:24,0:24:51.15:0,51,763	0/0:17,0:27:40.93:0,41,345	0/0:27,0:34:53.53:0,54,506	0/0:37,0:37:60.04:0,60,927	0/0:17,0:22:25.91:0,26,251	0/0:31,1:26:15.87:0,16,619	0/0:22,2:24:18.03:0,18,748	0/0:100,0:100:99:0,209,3126	0/0:18,0:18:45.15:0,45,720	0/0:20,0:20:44.98:0,45,653	0/0:49,1:48:9.01:0,9,1302	0/0:17,0:21:29.16:0,29,239	0/0:15,0:36:59.66:0,60,426	0/0:13,0:15:27.06:0,27,212	0/0:3,0:2:0:0,0,0
chr10	5185047	.	G	GT	390.37	PASS	AB=0.984;AC=8;AF=0.143;AN=56;BaseQRankSum=11.168;DP=985;FS=1.707;HRun=1;HaplotypeScore=169.3659;InbreedingCoeff=0.0544;MQ=53.21;MQ0=36;MQRankSum=0.232;QD=2.47;ReadPosRankSum=1.675;VQSLOD=-0.3058;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:52,2:53:62.15:0,62,460	0/0:9,0:9:18.06:0,18,247	0/0:63,0:11:27.38:0,27,301	0/0:73,0:17:35.79:0,36,444	0/0:23,0:21:57.19:0,57,777	0/0:18,0:18:45.61:0,46,609	0/0:52,2:53:82.79:0,83,1621	0/0:46,0:45:57.16:0,57,1266	0/0:54,0:54:99:0,150,2002	0/0:39,0:35:96.15:0,96,1253	0/0:25,0:24:72.23:0,72,978	0/0:29,0:27:78.26:0,78,1080	0/0:26,0:25:69.16:0,69,890	0/0:24,0:24:60.18:0,60,811	0/1:33,0:33:99:163,0,153	0/1:28,0:26:54.90:55,0,184	0/0:30,0:29:72.21:0,72,973	0/1:25,2:25:57.11:57,0,323	0/0:33,0:28:78.11:0,78,958	0/0:23,0:23:63.17:0,63,851	0/0:102,0:101:99:0,244,3238	0/0:24,0:22:63.21:0,63,865	0/0:26,0:26:44.55:0,45,849	0/0:51,0:49:99:0,117,1508	0/1:18,0:18:50.53:51,0,51	0/1:29,0:25:99:151,0,145	0/1:20,0:17:4.42:4,0,251	1/1:2,0:1:3.01:38,3,0
chr10	5185100	.	ATG	A	542.23	PASS	AB=0.956;AC=16;AF=0.296;AN=54;BaseQRankSum=4.881;DP=959;FS=1.796;HRun=0;HaplotypeScore=191.7666;InbreedingCoeff=-0.3340;MQ=50.24;MQ0=20;MQRankSum=-1.413;QD=1.00;ReadPosRankSum=-1.367;VQSLOD=2.7251;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:45:23.33:0,23,165	0/0:8,0:8:8.76:0,9,90	1/1:29,0:6:2.04:6,2,0	./.	0/1:24,2:26:17.23:17,0,642	0/1:18,1:19:12.76:13,0,288	0/1:61,3:64:86.07:86,0,856	0/0:63,0:62:33.78:0,34,454	0/0:44,1:45:12.36:0,12,750	0/1:32,3:35:42.89:43,0,664	0/0:22,1:23:1.92:0,2,443	0/1:24,3:28:50.51:51,0,306	0/0:35,0:35:74.75:0,75,1021	0/1:29,1:29:82.48:82,0,503	0/1:35,0:35:19.67:20,0,52	0/1:15,0:36:62:62,0,231	0/0:25,0:27:6.58:0,7,154	0/0:26,0:26:13.19:0,13,204	0/1:22,3:22:45.22:45,0,183	0/0:23,0:23:11.06:0,11,585	0/1:85,5:88:99:144,0,1028	0/0:24,0:24:48.12:0,48,679	0/1:37,3:40:27.36:27,0,888	0/0:44,1:45:55.44:0,55,1058	0/1:19,0:19:10.36:10,0,21	0/1:36,0:35:51.95:52,0,354	0/1:27,0:26:33.95:34,0,116	0/0:7,0:7:8.90:0,9,63
chr10	5185493	.	TAAA	T	1309.58	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.711;DP=605;FS=2.504;HRun=5;HaplotypeScore=84.7973;InbreedingCoeff=0.9961;MQ=67.94;MQ0=1;MQRankSum=-2.029;QD=40.92;ReadPosRankSum=1.358;VQSLOD=2.6433;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,123,2817	0/0:8,0:8:24.08:0,24,552	0/0:10,0:10:29.99:0,30,588	0/0:10,0:10:30.09:0,30,611	0/0:26,0:26:78.27:0,78,1779	0/0:19,0:19:57.20:0,57,1313	0/0:18,0:18:54.19:0,54,1223	0/0:36,0:36:99:0,108,2388	0/0:15,0:15:45.15:0,45,1038	0/0:25,0:25:75.26:0,75,1716	0/0:33,0:33:93.32:0,93,2128	0/0:22,0:22:66.23:0,66,1521	0/0:12,0:12:36.12:0,36,828	0/0:19,0:19:57.20:0,57,1294	0/0:16,0:16:48.16:0,48,1108	0/0:16,0:16:48.16:0,48,1108	1/1:1,31:32:84.29:1404,84,0	0/0:28,0:28:84.27:0,84,1874	0/0:13,0:13:39.13:0,39,900	0/0:31,0:31:93.32:0,93,2074	0/0:13,0:13:39.13:0,39,900	0/0:15,0:15:42.14:0,42,961	0/0:28,0:28:81.28:0,81,1846	0/0:26,0:25:72.25:0,72,1661	0/0:28,0:28:84.28:0,84,1866	0/0:29,0:29:84.28:0,84,1894	0/0:25,0:25:75.26:0,75,1712	0/0:11,0:11:30.10:0,30,692
chr10	5186858	.	A	AC	7491.20	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-15.622;DP=674;FS=3.691;HRun=3;HaplotypeScore=63.8295;InbreedingCoeff=0.9986;MQ=81.68;MQ0=0;MQRankSum=-2.439;QD=35.84;ReadPosRankSum=2.704;VQSLOD=5.6351;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,147,1750	0/0:13,0:13:39.12:0,39,468	0/0:18,0:18:42.12:0,42,492	0/0:17,0:17:51.10:0,51,575	0/0:28,0:28:81.25:0,81,972	0/0:25,0:25:72.22:0,72,864	0/0:22,0:22:57.17:0,57,684	1/1:2,27:29:81.14:1034,81,0	0/0:26,0:26:75.23:0,75,896	0/0:25,0:25:69.21:0,69,827	0/0:18,0:18:51.16:0,51,612	0/0:24,0:24:63.19:0,63,756	0/0:18,0:18:48.13:0,48,564	0/0:19,0:19:48.15:0,48,576	1/1:4,23:27:69.23:959,69,0	1/1:3,17:20:18.17:678,18,0	1/1:2,27:29:72.24:1008,72,0	1/1:2,18:20:45.15:630,45,0	0/0:27,0:27:72.21:0,72,853	0/0:31,0:31:84.23:0,84,986	0/0:28,0:28:78.24:0,78,936	0/0:22,0:22:60.18:0,60,719	0/0:25,0:25:69.20:0,69,814	0/0:26,0:26:78.17:0,78,905	1/1:1,14:15:39.13:546,39,0	1/1:3,27:30:65.64:1167,66,0	1/1:1,28:29:77.92:1091,78,0	1/1:1,9:10:27.09:378,27,0
chr10	5186961	.	T	TAACAC	2013.80	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-4.992;DP=699;FS=6.325;HRun=0;HaplotypeScore=124.9484;InbreedingCoeff=0.9701;MQ=86.65;MQ0=0;MQRankSum=-6.891;QD=67.13;ReadPosRankSum=-3.738;VQSLOD=3.6579;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,138,2831	0/0:16,0:16:48.13:0,48,929	0/0:27,0:27:66.23:0,66,1329	0/0:26,0:26:60.14:0,60,1141	0/0:19,0:19:51.18:0,51,1059	0/0:21,0:21:60.18:0,60,1169	0/0:38,0:38:90.31:0,90,1884	1/1:8,19:30:78.23:2109,78,0	0/0:26,0:26:69.22:0,69,1388	0/0:20,0:20:60.19:0,60,1150	0/0:15,0:15:42.14:0,42,876	0/0:27,0:27:69.21:0,69,1344	0/0:24,0:24:69.23:0,69,1410	0/0:16,0:16:42.13:0,42,838	0/0:33,0:33:93.32:0,93,1929	0/0:22,0:22:54.16:0,54,1044	0/0:29,0:29:87.28:0,87,1786	0/0:19,0:19:54.18:0,54,1084	0/0:31,0:31:90.26:0,90,1700	0/0:30,0:30:81.28:0,81,1677	0/0:48,0:48:99:0,144,2937	0/0:20,0:20:49.90:0,50,1054	0/0:19,0:19:54.19:0,54,1133	0/0:16,0:16:45.15:0,45,923	0/0:21,0:21:54.17:0,54,1095	0/0:28,0:28:78.24:0,78,1536	0/0:23,0:23:63.08:0,63,1300	0/0:4,0:4:12.02:0,12,213
chr10	5188089	.	C	CACACAT	317	PASS	AB=0.875;AC=12;AF=0.231;AN=52;BaseQRankSum=3.464;DP=686;FS=2.584;HRun=0;HaplotypeScore=212.8894;InbreedingCoeff=0.4448;MQ=40.69;MQ0=40;MQRankSum=-5.630;QD=2.62;ReadPosRankSum=0.001;VQSLOD=2.1494;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,0:4:0.47:1,0,0	0/0:12,0:11:15.05:0,15,332	0/0:40,0:4:7.83:0,8,106	0/1:38,0:3:21.82:22,0,94	0/0:23,0:20:36.12:0,36,828	0/0:19,0:17:30.04:0,30,659	0/0:30,0:19:4.13:0,4,500	0/1:68,0:41:86.08:86,0,353	0/0:35,0:35:58.38:0,58,1199	0/0:38,0:32:77.20:0,77,1754	0/0:14,0:12:9.02:0,9,167	0/0:47,0:40:69.02:0,69,1130	0/0:42,0:37:84.14:0,84,1883	0/0:36,0:35:59.83:0,60,1221	1/1:0,2:2:3.01:89,3,0	0/1:0,1:1:0:0,0,0	1/1:3,1:4:6.02:160,6,0	0/1:3,0:3:1.02:58,0,1	0/0:32,0:11:25.32:0,25,432	0/0:28,0:24:44.97:0,45,969	0/0:77,0:71:99:0,142,2590	0/0:32,0:28:54.63:0,55,1186	0/0:18,0:17:24.06:0,24,454	0/0:36,0:34:43.39:0,43,947	./.	0/0:2,0:2:2.99:0,3,23	1/1:1,0:1:3.01:30,3,0	./.
chr10	5188091	.	CAT	C	205.04	PASS	AB=0.960;AC=8;AF=0.154;AN=52;BaseQRankSum=4.651;DP=695;FS=15.469;HRun=0;HaplotypeScore=173.3760;InbreedingCoeff=0.4235;MQ=39.69;MQ0=42;MQRankSum=-6.841;QD=1.68;ReadPosRankSum=-2.538;VQSLOD=0.7299;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:1,3:4:1.25:3,1,0	0/0:12,0:11:12.68:0,13,285	0/0:38,0:3:8.98:0,9,106	0/1:43,0:3:1.71:2,0,61	0/0:24,0:21:38.33:0,38,702	0/0:19,0:17:32.66:0,33,591	0/0:30,0:19:21.01:0,21,515	0/1:63,6:41:99:198,0,484	0/0:35,0:35:57.34:0,57,1052	0/0:39,0:33:82.13:0,82,1538	0/0:14,0:12:8.64:0,9,140	0/0:47,0:40:65.38:0,65,1088	0/0:43,0:38:87.28:0,87,1629	0/0:34,0:33:59.54:0,60,1045	1/1:2,0:2:3.01:36,3,0	0/0:1,0:1:0:0,0,0	1/1:3,1:4:6.02:75,6,0	0/0:3,0:3:1.82:0,2,55	0/0:33,0:12:27.83:0,28,486	0/0:29,0:25:47.99:0,48,881	0/0:77,1:72:99:0,147,2551	0/0:32,0:28:54.14:0,54,1041	0/0:20,0:18:26.96:0,27,464	0/0:36,0:34:45.13:0,45,831	./.	0/0:2,0:2:3.01:0,3,58	0/0:1,0:1:2.99:0,3,23	./.
chr10	5188109	.	CATA	C	152.62	PASS	AB=0.981;AC=5;AF=0.104;AN=48;BaseQRankSum=4.310;DP=799;FS=20.217;HRun=0;HaplotypeScore=227.1270;InbreedingCoeff=0.4419;MQ=42.26;MQ0=34;MQRankSum=-6.156;QD=2.09;ReadPosRankSum=-4.410;VQSLOD=0.3904;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:3,0:3:0.08:0,0,1	0/0:13,0:12:17.96:0,18,242	0/0:55,0:5:12.04:0,12,215	0/0:59,0:8:20.31:0,20,259	0/0:30,0:28:55.53:0,56,653	0/0:24,0:21:37.81:0,38,459	0/0:34,3:28:39.24:0,39,560	0/1:61,4:38:99:170,0,465	0/0:38,0:37:59.73:0,60,802	0/0:44,1:39:54.29:0,54,1258	0/0:17,0:16:18.87:0,19,218	0/0:52,0:45:78.33:0,78,960	0/0:52,0:44:99:0,112,1312	0/0:42,0:39:71.02:0,71,884	./.	./.	1/1:4,0:4:5.91:62,6,0	0/1:3,0:3:4.97:22,0,5	0/0:24,0:18:46.44:0,46,592	0/0:26,0:25:53.91:0,54,719	0/0:100,0:96:99:0,205,2567	0/0:35,0:32:61.43:0,61,782	0/0:24,0:22:38.37:0,38,485	0/0:43,0:41:59.58:0,60,730	./.	0/0:2,0:2:3.01:0,3,42	0/1:1,0:1:0:0,0,0	./.
chr10	5188110	.	ATAT	A	444.31	PASS	AB=0.993;AC=12;AF=0.250;AN=48;BaseQRankSum=-4.354;DP=798;FS=3.276;HRun=0;HaplotypeScore=222.0589;InbreedingCoeff=0.0809;MQ=42.52;MQ0=33;MQRankSum=-3.563;QD=1.53;ReadPosRankSum=-11.745;VQSLOD=-0.6920;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:3,0:3:0.06:0,0,1	0/0:13,0:12:17.16:0,17,95	0/0:56,0:5:11.85:0,12,170	0/1:61,0:8:23.09:23,0,183	0/0:30,0:28:14.29:0,14,204	0/0:25,0:22:3.79:0,4,140	0/1:37,0:28:46.04:46,0,160	0/1:59,2:35:99:309,0,139	0/1:37,1:37:29.55:30,0,244	0/1:44,0:39:7.20:7,0,386	0/1:18,0:17:14.04:14,0,58	0/0:52,0:45:34.23:0,34,327	0/0:52,0:44:23.32:0,23,426	0/0:42,0:39:18.55:0,19,293	./.	./.	1/1:4,0:4:6.02:96,6,0	0/1:2,0:2:1.40:41,0,1	0/1:24,0:18:1.25:1,0,217	0/0:27,0:26:51.11:0,51,276	0/0:96,3:96:67.93:0,68,849	0/0:35,0:32:27.36:0,27,268	0/0:24,0:22:20.80:0,21,166	0/0:41,2:41:19.48:0,19,233	./.	0/0:2,0:2:2.99:0,3,23	1/1:1,0:1:2.50:9,2,0	./.
chr10	5188112	.	AT	A	16878.80	PASS	AB=0.771;AC=42;AF=0.913;AN=46;BaseQRankSum=-4.125;DP=788;FS=4.815;HRun=1;HaplotypeScore=144.0654;InbreedingCoeff=0.0285;MQ=43.15;MQ0=31;MQRankSum=5.131;QD=21.53;ReadPosRankSum=4.498;VQSLOD=5.1023;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,3:3:1.83:4,2,0	1/1:0,13:12:18.06:252,18,0	0/1:56,1:6:26.96:27,0,118	0/1:59,4:9:99:143,0,111	1/1:0,29:27:57.07:796,57,0	1/1:0,25:22:36.59:541,37,0	1/1:4,33:28:59.23:802,59,0	0/1:19,34:33:0.96:841,0,1	1/1:1,37:37:72.93:1044,73,0	1/1:5,38:39:99:1477,111,0	1/1:0,18:17:21.54:295,22,0	1/1:0,51:44:81.22:1134,81,0	1/1:2,52:45:99:1610,117,0	1/1:0,41:38:76.14:1052,76,0	./.	./.	1/1:1,3:4:6.02:81,6,0	1/1:0,2:2:6.02:82,6,0	0/1:4,18:17:1.57:544,0,2	1/1:0,27:26:54.15:755,54,0	1/1:5,93:94:99:3020,216,0	1/1:4,33:34:72.19:987,72,0	1/1:1,23:22:38.82:544,39,0	1/1:6,37:40:59.85:839,60,0	./.	./.	1/1:0,1:1:2.22:7,2,0	./.
chr10	5188143	.	ACACG	A	1420.23	PASS	AB=0.983;AC=19;AF=0.339;AN=56;BaseQRankSum=2.991;DP=1147;FS=71.204;HRun=0;HaplotypeScore=314.2423;InbreedingCoeff=0.5228;MQ=46.15;MQ0=28;MQRankSum=-5.259;QD=6.31;ReadPosRankSum=-4.831;VQSLOD=-0.5007;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:9,0:9:0.02:0,0,1	0/0:21,0:21:29.84:0,30,743	0/0:50,0:17:42.69:0,43,793	0/0:46,0:19:38.24:0,38,707	0/0:39,1:40:25.23:0,25,1462	0/0:36,2:36:14.32:0,14,1304	0/0:58,0:47:60.47:0,60,2150	0/0:70,0:48:99:0,103,1973	0/0:71,1:69:4.19:0,4,2319	0/1:79,1:72:99:445,0,2685	0/1:24,2:25:99:130,0,615	0/0:75,1:73:99:0,108,2892	0/0:80,0:74:36.88:0,37,3208	0/0:53,0:51:68.58:0,69,1935	1/1:9,0:9:9.03:142,9,0	1/1:12,0:12:11.92:154,12,0	1/1:4,0:3:3.01:37,3,0	1/1:5,0:5:11.49:97,11,0	0/0:31,0:28:59.40:0,59,1669	0/1:52,0:51:20.90:21,0,1281	0/0:124,4:116:99:0,269,6356	0/0:58,0:58:6.13:0,6,1898	0/0:43,1:43:4.51:0,5,1132	0/0:56,1:55:74.71:0,75,1774	1/1:8,0:8:6.02:79,6,0	0/1:6,0:6:65.80:134,0,66	1/1:10,0:10:17.99:250,18,0	1/1:4,0:4:11.93:114,12,0
chr10	5188145	.	ACG	A	113.65	PASS	AB=0.970;AC=15;AF=0.268;AN=56;BaseQRankSum=7.202;DP=1150;FS=57.755;HRun=0;HaplotypeScore=287.9129;InbreedingCoeff=0.5899;MQ=46.02;MQ0=38;MQRankSum=-1.402;QD=1.67;ReadPosRankSum=-5.748;VQSLOD=-0.2624;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:9,0:9:0.60:2,1,0	0/0:22,0:22:29.93:0,30,577	0/0:47,0:17:43.89:0,44,623	0/0:44,0:18:37.25:0,37,682	0/0:42,0:41:63.63:0,64,1258	0/0:37,0:35:51.24:0,51,1074	0/0:58,0:46:95.72:0,96,1790	0/0:68,2:46:99:0,123,2006	0/0:73,0:70:94.09:0,94,1897	0/0:77,0:69:99:0,105,2333	0/0:28,0:27:1.89:0,2,501	0/0:75,0:72:99:0,140,2280	0/0:81,0:75:59.91:0,60,2513	0/0:53,0:51:67.71:0,68,1447	1/1:9,0:9:7.46:29,7,0	1/1:11,1:12:4.83:55,5,0	1/1:4,0:3:0.89:2,1,0	0/1:5,0:5:6.51:7,0,7	0/0:34,0:30:84.41:0,84,1387	0/0:54,0:50:57.35:0,57,1104	0/0:129,0:117:99:0,272,4759	0/0:58,0:57:80.24:0,80,1527	0/0:43,0:43:44.88:0,45,914	0/0:53,3:54:76.63:0,77,1415	1/1:8,0:8:5.24:22,5,0	0/1:7,0:7:55.23:77,0,55	0/1:9,1:10:0.93:29,0,1	1/1:4,0:4:5.91:38,6,0
chr10	5188224	.	T	TAC	620.34	PASS	AB=0.975;AC=16;AF=0.286;AN=56;BaseQRankSum=4.947;DP=1059;FS=12.054;HRun=0;HaplotypeScore=179.7422;InbreedingCoeff=0.7041;MQ=50.05;MQ0=26;MQRankSum=-4.056;QD=3.90;ReadPosRankSum=-0.600;VQSLOD=2.2224;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:2,0:2:0:0,0,0	0/0:11,0:11:15.05:0,15,188	0/0:36,0:15:39.03:0,39,443	0/0:38,3:18:37.20:0,37,427	0/0:32,0:32:64.05:0,64,780	0/0:33,1:33:54.53:0,55,696	0/0:35,4:37:42.87:0,43,1078	0/0:98,2:62:86.82:0,87,1458	0/0:75,0:75:99:0,180,2289	0/1:73,4:73:22.16:22,0,1894	0/0:26,0:26:35.03:0,35,460	0/0:67,1:61:84.17:0,84,1586	0/0:65,0:62:99:0,149,1895	0/0:42,0:41:81.03:0,81,1026	1/1:7,5:12:2.98:24,3,0	1/1:7,4:11:2.64:21,3,0	1/1:5,0:5:3:35,3,0	0/0:3,0:3:0.05:0,0,1	0/0:33,0:21:54.14:0,54,661	0/0:37,4:40:78.54:0,79,986	0/0:137,3:131:99:0,307,3807	0/0:43,0:42:60.18:0,60,760	0/0:23,2:25:44.27:0,44,575	0/0:44,0:42:68.39:0,68,930	1/1:8,6:14:2.99:25,3,0	1/1:15,4:18:33.49:443,33,0	1/1:10,0:10:5.83:42,6,0	1/1:9,0:9:15.03:172,15,0
chr10	5188230	.	C	CAT	927.26	PASS	AB=0.818;AC=15;AF=0.278;AN=54;BaseQRankSum=9.339;DP=1050;FS=22.335;HRun=0;HaplotypeScore=172.8074;InbreedingCoeff=0.8101;MQ=50.21;MQ0=23;MQRankSum=-5.009;QD=11.17;ReadPosRankSum=-1.251;VQSLOD=1.8538;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/0:8,0:8:15.05:0,15,229	0/0:41,0:16:44.98:0,45,604	0/0:50,0:23:44.54:0,45,677	0/0:29,0:29:66.21:0,66,981	0/0:33,0:33:57.80:0,58,849	0/0:40,0:38:64.84:0,65,1364	0/0:89,0:59:99:0,142,2051	0/0:70,0:70:99:0,190,2816	0/0:73,0:71:70.52:0,71,2559	0/0:20,0:20:41.91:0,42,587	0/0:66,0:60:99:0,108,2081	0/0:69,0:65:99:0,176,2456	0/0:43,0:42:99:0,99,1371	1/1:11,0:11:5.86:74,6,0	1/1:12,0:11:7.35:73,7,0	1/1:6,1:6:3.01:52,3,0	1/1:2,0:2:2.96:19,3,0	0/0:31,0:21:63.17:0,63,880	0/0:41,0:40:87.99:0,88,1264	0/0:144,0:138:99:0,340,4918	0/0:47,0:47:71.39:0,71,995	0/0:25,0:25:53.96:0,54,750	0/0:47,0:45:86.67:0,87,1216	1/1:12,3:15:3.01:50,3,0	1/1:17,3:18:42.04:494,42,0	1/1:5,2:7:11.85:126,12,0	0/1:7,2:9:0.38:207,0,0
chr10	5188250	.	CCTACCT	C	223.88	PASS	AB=0.708;AC=5;AF=0.096;AN=52;BaseQRankSum=5.334;DP=994;FS=9.043;HRun=0;HaplotypeScore=220.9136;InbreedingCoeff=0.3314;MQ=51.58;MQ0=14;MQRankSum=-5.055;QD=8.96;ReadPosRankSum=-1.019;VQSLOD=1.3910;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:7,0:7:15.05:0,15,551	0/0:36,0:14:38.25:0,38,914	0/0:47,0:17:36.12:0,36,784	0/0:37,0:36:60.18:0,60,2010	0/0:33,0:31:89.18:0,89,2354	0/0:39,0:38:99:0,108,3825	0/0:69,0:47:99:0,126,3812	0/0:63,0:63:99:0,182,6143	0/0:71,0:65:99:0,183,6094	0/0:24,0:23:42.10:0,42,1405	0/0:67,0:61:99:0,168,5925	0/0:60,0:57:99:0,159,5237	0/0:45,0:44:99:0,117,3778	0/0:5,0:5:0.66:0,1,19	0/0:5,0:3:2.99:0,3,23	1/1:3,1:3:2.94:19,3,0	./.	0/0:26,0:24:72.24:0,72,2431	0/0:48,0:48:99:0,114,3623	0/0:146,0:142:99:0,364,12719	0/0:51,0:52:80.74:0,81,2546	0/0:28,0:26:48.05:0,48,1567	0/0:49,0:48:99:0,100,3811	0/0:9,2:11:2.60:0,3,10	0/1:11,1:11:69.56:70,0,727	0/1:0,2:2:0:0,0,0	0/1:4,3:7:6.02:235,0,6
chr10	5188274	.	C	CAT	293.20	PASS	AB=0.838;AC=12;AF=0.222;AN=54;BaseQRankSum=6.241;DP=1138;FS=9.075;HRun=0;HaplotypeScore=165.5683;InbreedingCoeff=0.5600;MQ=48.04;MQ0=49;MQRankSum=-2.139;QD=3.45;ReadPosRankSum=-2.474;VQSLOD=1.8909;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:11,0:11:17.42:0,17,237	0/0:18,0:5:12.04:0,12,184	0/0:22,0:10:18.52:0,19,248	0/0:40,0:38:51.16:0,51,756	0/0:35,0:32:75.15:0,75,1080	0/0:49,0:42:99:0,111,1571	0/0:114,0:52:99:0,128,1764	0/0:69,0:69:99:0,192,2724	0/0:95,1:83:99:0,159,3088	0/0:28,0:27:33.11:0,33,503	0/0:75,0:71:99:0,187,2727	0/0:60,0:56:99:0,153,2241	0/0:55,0:53:99:0,139,2066	1/1:7,2:9:1.78:6,2,0	0/1:13,3:12:0.25:0,0,0	0/1:5,2:6:0.05:0,0,0	1/1:0,3:3:6.02:96,6,0	0/0:35,0:25:75.25:0,75,1127	0/0:45,0:45:99:0,108,1629	0/0:163,0:146:99:0,343,4973	0/0:56,0:55:69.03:0,69,981	0/0:35,0:34:35.46:0,35,589	0/0:46,0:45:92.61:0,93,1314	1/1:7,8:14:6.02:116,6,0	0/1:19,2:16:44.54:45,0,324	1/1:1,4:5:3.01:57,3,0	0/1:7,2:7:12.60:106,0,13
chr10	5188290	.	CACACAT	C	49.61	PASS	AB=1.000;AC=10;AF=0.185;AN=54;BaseQRankSum=7.572;DP=1155;FS=2.952;HRun=0;HaplotypeScore=232.7368;InbreedingCoeff=0.3452;MQ=47.31;MQ0=85;MQRankSum=-0.575;QD=0.56;ReadPosRankSum=-4.317;VQSLOD=1.4833;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/0:15,0:15:20.77:0,21,587	0/0:6,0:2:6.02:0,6,109	0/0:8,0:4:6.02:0,6,87	0/0:35,0:34:48.16:0,48,1251	0/0:30,0:26:62.12:0,62,1950	0/0:50,0:45:99:0,102,2554	0/0:141,0:55:99:0,116,2118	0/0:67,0:65:99:0,178,4979	0/0:110,0:93:99:0,247,6611	0/0:30,0:29:33.10:0,33,829	0/0:75,0:72:99:0,192,5473	0/0:56,0:54:99:0,157,4461	0/0:55,0:54:99:0,147,4365	1/1:10,0:9:2.96:20,3,0	1/1:16,0:12:1.24:3,1,0	0/1:8,0:7:1.93:2,0,6	0/1:5,0:5:24.21:26,0,24	0/0:50,0:28:81.28:0,81,2147	0/0:44,0:43:99:0,108,3095	0/0:149,4:138:99:0,316,8558	0/0:48,0:47:51.13:0,51,1469	0/0:33,0:33:30.02:0,30,950	0/0:49,0:47:88.80:0,89,2894	0/1:17,0:16:3.33:3,0,13	0/1:27,0:19:95.08:95,0,492	1/1:6,0:6:5.05:18,5,0	0/0:9,0:7:1.34:0,1,13
chr10	5188306	.	CAT	C	131.54	PASS	AB=0.962;AC=3;AF=0.060;AN=50;BaseQRankSum=6.405;DP=1159;FS=3.055;HRun=0;HaplotypeScore=165.1210;InbreedingCoeff=0.2979;MQ=46.31;MQ0=100;MQRankSum=-6.577;QD=0.82;ReadPosRankSum=0.514;VQSLOD=2.8785;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:15,0:14:25.41:0,25,427	./.	./.	0/0:32,0:30:42.04:0,42,748	0/0:35,0:34:92.92:0,93,1609	0/0:55,0:46:99:0,114,1915	0/1:142,6:43:99:204,0,774	0/0:68,0:66:99:0,183,3150	0/0:106,0:90:99:0,114,3837	0/0:26,0:25:29.29:0,29,482	0/0:76,0:74:99:0,194,3402	0/0:55,0:53:99:0,152,2786	0/0:57,0:56:99:0,153,2754	1/1:10,0:9:2.28:9,2,0	0/0:16,0:12:2.59:0,3,56	0/0:9,0:8:9.02:0,9,142	0/0:8,0:7:18.02:0,18,275	0/0:57,0:27:81.23:0,81,1406	0/0:50,0:48:99:0,108,1905	0/0:146,1:129:99:0,306,5139	0/0:46,0:44:51.10:0,51,879	0/0:33,0:33:39.13:0,39,726	0/0:48,0:47:99:0,107,1914	0/0:16,0:15:12.04:0,12,229	0/0:28,0:19:21.44:0,21,727	0/0:5,0:5:6.01:0,6,97	0/0:6,0:4:9.03:0,9,170
chr10	5188308	.	TAC	T	177.49	PASS	AB=0.960;AC=4;AF=0.080;AN=50;BaseQRankSum=6.416;DP=1158;FS=8.938;HRun=0;HaplotypeScore=164.5480;InbreedingCoeff=0.1936;MQ=46.38;MQ0=100;MQRankSum=-7.167;QD=0.66;ReadPosRankSum=-1.528;VQSLOD=1.5769;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/0:16,0:15:25.55:0,26,400	./.	./.	0/0:31,0:29:42.08:0,42,662	0/0:36,0:34:96.22:0,96,1612	0/0:52,2:46:99:0,105,1829	0/1:148,3:40:99:250,0,614	0/0:67,0:65:99:0,172,2928	0/1:100,6:90:3.16:3,0,3518	0/0:26,0:25:26.30:0,26,426	0/0:77,1:77:99:0,186,3122	0/0:54,0:52:99:0,150,2487	0/0:55,1:55:99:0,154,2638	1/1:9,1:9:1.82:6,2,0	0/0:12,3:12:2.59:0,3,53	0/0:9,0:8:9.03:0,9,152	0/0:8,0:7:18.06:0,18,302	0/0:55,0:27:69.23:0,69,1182	0/0:50,0:48:99:0,102,1751	0/0:146,0:128:99:0,271,4646	0/0:44,1:44:48.12:0,48,833	0/0:33,0:33:39.13:0,39,665	0/0:48,0:47:99:0,107,1804	0/0:16,1:16:12.04:0,12,212	0/0:27,1:19:8.75:0,9,659	0/0:5,0:5:6.01:0,6,92	0/0:6,0:4:9.03:0,9,158
chr10	5188366	.	C	CAT	59.52	PASS	AB=0.792;AC=2;AF=0.036;AN=56;BaseQRankSum=3.774;DP=874;FS=4.227;HRun=0;HaplotypeScore=146.0013;InbreedingCoeff=0.2921;MQ=52.20;MQ0=19;MQRankSum=-2.852;QD=1.98;ReadPosRankSum=-1.906;VQSLOD=2.1093;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:4:0:0,0,0	0/0:11,0:10:20.95:0,21,286	0/0:41,0:16:34.32:0,34,561	0/0:32,0:15:36.05:0,36,482	0/0:22,0:21:48.09:0,48,646	0/0:39,0:38:99:0,99,1427	0/0:44,0:39:99:0,105,1480	0/0:55,0:31:41.86:0,42,321	0/0:73,0:72:99:0,198,2753	0/0:61,0:60:99:0,162,2118	0/0:17,0:17:30.09:0,30,439	0/0:68,0:67:99:0,186,2621	0/0:36,0:36:99:0,105,1427	0/0:34,0:34:96.26:0,96,1379	0/0:3,2:5:0:0,0,0	0/1:10,5:12:0.35:0,0,1	0/0:6,0:6:3.23:0,3,16	0/0:5,0:4:6.86:0,7,49	0/0:19,0:16:45.01:0,45,614	0/0:34,0:34:54.15:0,54,783	0/0:104,1:99:99:0,256,3588	0/0:40,0:36:53.97:0,54,727	0/0:31,0:30:44.81:0,45,665	0/0:42,0:41:93.19:0,93,1316	0/0:9,3:12:2.94:0,3,19	0/1:12,3:14:99:133,0,182	0/0:2,0:1:2.99:0,3,23	0/0:2,0:2:2.99:0,3,24
chr10	5188466	.	C	CAT	607.98	PASS	AB=0.892;AC=10;AF=0.185;AN=54;BaseQRankSum=8.146;DP=991;FS=68.643;HRun=0;HaplotypeScore=154.5278;InbreedingCoeff=0.3647;MQ=48.29;MQ0=48;MQRankSum=-7.292;QD=3.32;ReadPosRankSum=-1.524;VQSLOD=-0.0259;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:5,0:2:0:0,0,0	0/0:15,0:15:12.01:0,12,159	0/0:10,0:1:2.98:0,3,22	0/0:8,0:2:6.01:0,6,65	0/0:35,0:35:81.23:0,81,1212	0/0:26,0:26:61.99:0,62,873	0/0:50,1:42:98.49:0,98,1354	0/1:92,1:42:99:163,0,298	0/0:54,0:53:99:0,144,2108	0/0:83,0:77:99:0,209,2915	0/0:23,0:22:57.13:0,57,804	0/0:48,0:47:99:0,121,1789	0/0:45,0:45:99:0,126,1885	0/0:56,0:56:99:0,162,2334	1/1:28,12:33:2.24:41,2,0	0/0:24,10:27:2.49:0,2,17	1/1:3,3:6:10.85:177,11,0	0/0:4,0:3:5.96:0,6,67	0/0:22,0:11:29.98:0,30,392	0/0:45,0:45:99:0,104,1524	0/0:112,0:101:99:0,242,3327	0/0:58,0:58:99:0,124,2065	0/0:37,0:35:87.23:0,87,1294	0/0:36,0:35:58.52:0,59,824	./.	0/1:12,7:14:99:249,0,138	0/1:9,2:9:35.82:99,0,36	1/1:9,0:6:2.37:9,2,0
chr10	5188472	.	CAT	C	52.11	PASS	AB=0.892;AC=9;AF=0.167;AN=54;BaseQRankSum=7.724;DP=952;FS=13.836;HRun=0;HaplotypeScore=146.4153;InbreedingCoeff=0.4551;MQ=48.93;MQ0=45;MQRankSum=-6.557;QD=0.50;ReadPosRankSum=-0.954;VQSLOD=1.3425;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:2:0:0,0,0	0/0:16,0:16:20.94:0,21,366	0/0:11,0:1:3.01:0,3,57	0/0:10,0:3:5.76:0,6,110	0/0:33,0:33:81.24:0,81,1507	0/0:25,1:26:55.64:0,56,1046	0/0:48,0:39:87.74:0,88,1610	0/0:74,0:31:59.60:0,60,718	0/0:58,0:57:99:0,156,2798	0/0:83,0:76:69.39:0,69,3186	0/0:24,0:23:60.21:0,60,1123	0/0:49,0:49:99:0,126,2285	0/0:44,0:44:99:0,126,2261	0/0:55,0:55:99:0,162,2947	0/1:35,3:31:1.05:1,0,1	1/1:31,1:26:2.50:17,3,0	0/1:4,2:6:12.18:12,0,61	1/1:4,0:3:5.95:42,6,0	0/0:20,0:12:33.10:0,33,578	0/0:42,0:42:99:0,105,1906	0/0:109,0:98:99:0,240,4179	0/0:59,0:59:99:0,127,2693	0/0:33,0:32:77.96:0,78,1383	0/0:32,1:32:52.38:0,52,951	./.	0/1:18,0:14:57.34:57,0,121	0/0:9,2:9:4.24:0,4,24	1/1:6,1:5:3.01:45,3,0
chr10	5188474	.	TAC	T	147.29	PASS	AB=0.857;AC=9;AF=0.167;AN=54;BaseQRankSum=6.041;DP=938;FS=13.476;HRun=0;HaplotypeScore=145.1785;InbreedingCoeff=0.5489;MQ=48.98;MQ0=43;MQRankSum=-6.074;QD=1.49;ReadPosRankSum=-1.129;VQSLOD=1.8676;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:2,0:2:0:0,0,0	0/0:15,0:15:21.07:0,21,372	0/0:11,0:1:3.01:0,3,55	0/0:11,0:3:6.02:0,6,109	0/0:29,0:29:78.24:0,78,1360	0/0:27,0:27:64.09:0,64,1088	0/0:43,0:34:81.75:0,82,1456	0/0:69,3:31:60.74:0,61,498	0/0:58,0:57:99:0,150,2569	0/0:80,0:74:99:0,112,2930	0/0:24,0:23:60.19:0,60,1048	0/0:47,1:48:99:0,120,2087	0/0:46,0:46:99:0,123,2106	0/0:56,0:56:99:0,156,2715	1/1:24,14:31:2.25:13,2,0	1/1:24,8:27:2.62:35,3,0	0/0:6,0:6:4.95:0,5,113	1/1:0,4:3:6.02:86,6,0	0/0:20,0:12:33.09:0,33,555	0/0:42,0:42:99:0,102,1696	0/0:108,1:99:99:0,232,3866	0/0:58,0:58:99:0,138,2499	0/0:32,0:31:72.01:0,72,1267	0/0:33,1:33:53.96:0,54,897	./.	0/1:15,3:14:99:111,0,190	0/0:7,3:8:5.78:0,6,36	1/1:3,4:5:3:28,3,0
chr10	5188478	.	CAT	C	73.27	PASS	AB=0.941;AC=9;AF=0.167;AN=54;BaseQRankSum=6.212;DP=899;FS=10.156;HRun=0;HaplotypeScore=138.0267;InbreedingCoeff=0.5662;MQ=49.35;MQ0=40;MQRankSum=-6.206;QD=0.80;ReadPosRankSum=-1.401;VQSLOD=1.7587;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:3,0:2:0:0,0,0	0/0:15,0:15:20.97:0,21,404	0/0:13,0:3:4.83:0,5,63	0/0:15,0:4:8.71:0,9,135	0/0:30,0:30:81.02:0,81,1390	0/0:28,0:28:62.83:0,63,1187	0/0:43,1:35:84.74:0,85,1536	0/0:54,1:21:15.04:0,15,242	0/0:58,0:57:99:0,159,2772	0/0:74,2:70:94.87:0,95,3040	0/0:23,0:22:57.18:0,57,1066	0/0:48,0:48:99:0,117,2164	0/0:44,0:44:99:0,126,2233	0/0:54,0:54:99:0,156,2828	1/1:34,1:29:2.46:32,2,0	1/1:29,2:25:2.50:17,3,0	0/0:6,0:6:11.77:0,12,135	1/1:4,0:3:5.96:43,6,0	0/0:23,0:12:33.06:0,33,596	0/0:40,0:40:93.30:0,93,1716	0/0:103,0:94:99:0,235,4059	0/0:54,0:54:99:0,138,2629	0/0:29,0:28:74.98:0,75,1351	0/0:34,0:33:58.38:0,58,1024	./.	0/1:15,1:13:95.42:95,0,205	0/0:8,0:7:4.23:0,4,25	1/1:6,0:5:2.37:9,2,0
chr10	5188508	.	CAT	C	204.68	PASS	AB=0.991;AC=8;AF=0.154;AN=52;BaseQRankSum=6.513;DP=815;FS=0.852;HRun=0;HaplotypeScore=107.4663;InbreedingCoeff=0.3458;MQ=54.08;MQ0=25;MQRankSum=-7.062;QD=1.69;ReadPosRankSum=-5.954;VQSLOD=0.0736;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:12,0:12:24.03:0,24,418	0/0:40,0:16:43.31:0,43,638	0/0:40,0:16:20.04:0,20,476	0/0:23,0:22:63.15:0,63,1066	0/0:29,0:29:74.03:0,74,1334	0/0:38,0:31:87.24:0,87,1512	0/1:65,4:49:99:273,0,196	0/0:51,0:51:99:0,135,2491	0/0:55,0:52:99:0,147,2459	0/0:19,0:19:57.18:0,57,1044	0/0:38,0:38:89.77:0,90,1643	0/0:39,0:39:99:0,116,1981	0/0:38,0:38:99:0,111,1926	0/1:19,0:17:0:0,0,0	0/1:13,0:8:0:0,0,0	0/1:4,0:4:0:0,0,0	1/1:2,0:1:2.88:15,3,0	0/0:23,0:15:42.12:0,42,697	0/0:29,0:29:72.16:0,72,1151	0/0:85,0:80:99:0,202,3506	0/0:46,0:46:99:0,126,2018	0/0:23,0:23:60.15:0,60,1024	0/0:47,1:47:84.05:0,84,1480	./.	0/0:8,0:6:5.97:0,6,74	0/1:8,0:7:7.20:7,0,97	0/1:6,0:6:6.27:6,0,103
chr10	5188510	.	T	TAC	756.89	PASS	AB=1.000;AC=5;AF=0.104;AN=48;BaseQRankSum=1.591;DP=798;FS=16.985;HRun=0;HaplotypeScore=108.9698;InbreedingCoeff=0.6959;MQ=54.95;MQ0=19;MQRankSum=-8.843;QD=8.80;ReadPosRankSum=-7.216;VQSLOD=-0.0185;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	./.	0/0:11,0:11:21.06:0,21,265	0/0:39,0:17:39.99:0,40,438	0/0:40,0:17:25.79:0,26,320	0/0:22,0:21:48.15:0,48,605	0/0:30,0:30:67.47:0,67,885	0/0:38,0:31:72.23:0,72,908	1/1:70,11:61:14.24:838,14,0	0/0:51,0:51:99:0,129,1604	0/0:50,0:50:99:0,108,1293	0/0:19,0:19:54.17:0,54,681	0/0:38,0:38:78.59:0,79,983	0/0:38,0:38:94.54:0,95,1174	0/0:37,0:37:90.29:0,90,1135	./.	./.	0/1:3,0:3:0:0,0,0	1/1:2,0:1:2.96:19,3,0	0/0:18,0:13:36.04:0,36,423	0/0:27,0:27:51.15:0,51,624	0/0:83,0:79:99:0,169,2089	0/0:44,0:44:87.28:0,87,1097	0/0:22,0:22:48.14:0,48,591	0/0:46,0:46:75.22:0,75,939	./.	0/0:7,0:5:3.01:0,3,38	0/0:8,0:7:6.01:0,6,65	0/0:6,0:6:6.01:0,6,69
chr10	5188567	.	CTA	C	35.04	PASS	AB=0.945;AC=5;AF=0.096;AN=52;BaseQRankSum=7.156;DP=759;FS=3.483;HRun=0;HaplotypeScore=125.6582;InbreedingCoeff=0.1105;MQ=49.37;MQ0=21;MQRankSum=-2.160;QD=0.31;ReadPosRankSum=-1.056;VQSLOD=2.4851;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:15:3.04:27,3,0	0/0:9,0:9:24:0,24,302	0/0:41,0:18:9.85:0,10,221	0/0:40,0:22:18.66:0,19,319	0/0:22,0:21:5.19:0,5,532	0/0:32,0:32:71.70:0,72,823	0/0:30,0:28:41.88:0,42,605	0/0:78,0:55:99:0,136,1151	0/0:48,2:51:19.51:0,20,1254	0/1:40,2:43:46.99:47,0,1075	0/0:18,0:18:50.57:0,51,561	0/1:32,1:33:28.30:28,0,545	0/0:31,1:32:69.48:0,69,1034	0/0:25,0:24:57.56:0,58,719	./.	0/0:19,0:17:6.44:0,6,24	0/0:7,0:7:1.82:0,2,5	0/0:4,0:4:5.97:0,6,46	0/0:18,0:15:9.60:0,10,256	0/0:16,1:17:2.53:0,3,454	0/0:70,1:69:90.09:0,90,1325	0/0:39,0:38:97.04:0,97,1253	0/1:18,2:20:41.24:41,0,478	0/0:51,0:52:27.32:0,27,1050	./.	0/0:8,0:7:14.47:0,14,88	0/0:8,0:8:1.47:0,1,20	0/0:5,0:5:6.78:0,7,28
chr10	5188568	.	TACACACACACAC	T	1183.01	PASS	AC=14;AF=0.259;AN=54;BaseQRankSum=4.844;DP=774;FS=35.150;HRun=0;HaplotypeScore=242.6360;InbreedingCoeff=0.8580;MQ=49.14;MQ0=21;MQRankSum=-6.389;QD=19.08;ReadPosRankSum=-1.734;VQSLOD=1.2835;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:22:14.77:0,15,141	0/0:8,0:8:15.05:0,15,676	0/0:41,0:17:12:0,12,186	0/0:39,0:20:18.06:0,18,377	0/0:22,0:22:39.13:0,39,1711	0/0:31,0:33:55.13:0,55,2358	0/0:26,0:27:32.04:0,32,1402	0/0:77,0:54:46.27:0,46,967	0/0:45,0:48:82.16:0,82,3441	0/0:42,0:43:81.24:0,81,3330	0/0:18,0:18:27.09:0,27,1166	0/0:32,0:35:41.89:0,42,1790	0/0:31,0:32:60.21:0,60,2913	0/0:23,0:24:51.17:0,51,2081	./.	1/1:5,14:17:20.29:447,20,0	1/1:1,6:7:3.01:103,3,0	1/1:2,2:4:6.01:69,6,0	0/0:16,0:16:21.04:0,21,580	0/0:20,0:20:45.15:0,45,1820	0/0:69,0:69:83.65:0,84,3485	0/0:38,0:38:75.72:0,76,3498	0/0:21,0:21:33.05:0,33,1551	0/0:47,0:55:85.70:0,86,3370	1/1:1,9:10:3.01:38,3,0	1/1:8,1:7:9.03:230,9,0	1/1:2,6:8:6.02:181,6,0	1/1:2,2:5:12.04:284,12,0
chr10	5188831	.	G	GC	718.41	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-1.443;DP=649;FS=1.783;HRun=6;HaplotypeScore=65.0718;InbreedingCoeff=0.9996;MQ=88.18;MQ0=0;MQRankSum=-1.567;QD=27.63;ReadPosRankSum=-3.863;VQSLOD=2.4480;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,108,1089	0/0:12,0:12:33.07:0,33,336	0/0:22,0:22:60.11:0,60,601	0/0:27,0:27:72.13:0,72,720	0/0:19,0:19:42.08:0,42,428	0/0:18,0:18:54.11:0,54,544	0/0:21,0:21:51.05:0,51,498	1/1:4,22:26:66.20:813,66,0	0/0:25,0:25:66.13:0,66,666	0/0:26,0:26:75.15:0,75,757	0/0:23,0:23:63.13:0,63,636	0/0:17,0:17:42.09:0,42,429	0/0:22,0:22:57.10:0,57,569	0/0:22,0:22:63.13:0,63,636	0/0:17,0:17:51.12:0,51,520	0/0:15,0:14:39.09:0,39,398	0/0:26,0:26:69.14:0,69,698	0/0:25,0:25:60.13:0,60,612	0/0:25,0:25:75.17:0,75,765	0/0:17,0:17:48.10:0,48,485	0/0:23,0:22:69.12:0,69,689	0/0:39,0:39:99:0,108,1093	0/0:19,0:19:51.10:0,51,513	0/0:27,0:26:66.12:0,66,666	0/0:27,0:26:75.08:0,75,736	0/0:25,0:25:69.13:0,69,693	0/0:27,0:27:69.15:0,69,704	0/0:16,0:16:45.10:0,45,459
chr10	5189184	.	GC	G	1184.28	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=9.753;DP=777;FS=6.468;HRun=3;HaplotypeScore=99.2144;InbreedingCoeff=0.9976;MQ=85.78;MQ0=0;MQRankSum=-6.011;QD=28.20;ReadPosRankSum=-0.986;VQSLOD=2.3279;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,41:42:99:1279,105,0	0/0:11,0:11:33.09:0,33,441	0/0:23,0:23:60.13:0,60,806	0/0:28,0:28:72.23:0,72,997	0/0:13,0:13:39.13:0,39,556	0/0:22,0:22:63.21:0,63,905	0/0:25,0:25:75.21:0,75,1024	0/0:28,0:28:84.23:0,84,1132	0/0:30,0:30:84.27:0,84,1191	0/0:28,0:28:84.28:0,84,1190	0/0:20,0:20:60.15:0,60,818	0/0:31,0:31:90.30:0,90,1283	0/0:25,0:25:72.24:0,72,1037	0/0:32,0:32:93.30:0,93,1316	0/0:30,0:30:90.30:0,90,1288	0/0:31,0:31:93.30:0,93,1321	0/0:36,0:35:99:0,105,1451	0/0:25,0:25:69.21:0,69,973	0/0:24,0:24:69.23:0,69,993	0/0:8,0:8:24.06:0,24,310	0/0:81,0:81:99:0,244,3453	0/0:17,0:17:48.16:0,48,680	0/0:17,0:17:51.17:0,51,734	0/0:39,0:39:99:0,111,1598	0/0:24,0:24:69.23:0,69,982	0/0:27,0:27:81.27:0,81,1163	0/0:27,0:27:81.27:0,81,1165	0/0:33,0:33:99:0,99,1347
chr10	5189318	.	GGGCGTCGC	G	1085.59	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.985;DP=679;FS=5.522;HRun=0;HaplotypeScore=177.2922;InbreedingCoeff=0.9926;MQ=76.33;MQ0=0;MQRankSum=-6.328;QD=43.42;ReadPosRankSum=2.377;VQSLOD=3.3522;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,117,4995	0/0:18,0:18:51.13:0,51,1951	0/0:12,0:12:24.07:0,24,873	0/0:15,0:15:36.12:0,36,1145	0/0:12,0:12:30.10:0,30,1305	0/0:17,0:17:48.16:0,48,2126	0/0:34,0:34:99:0,99,4074	0/0:36,0:36:93.28:0,93,3652	0/0:30,0:30:87.30:0,87,3692	0/0:27,0:27:81.28:0,81,3361	0/0:12,0:12:30.10:0,30,1235	0/0:33,0:33:87.30:0,87,3687	0/0:27,0:27:81.28:0,81,3371	0/0:27,0:27:75.23:0,75,3047	0/0:31,0:31:90.31:0,90,3784	0/0:26,0:26:78.27:0,78,3333	1/1:4,21:25:42.14:1180,42,0	0/0:28,0:28:81.28:0,81,3546	0/0:22,0:22:57.20:0,57,2296	0/0:15,0:15:36.12:0,36,1515	0/0:67,0:67:99:0,193,7568	0/0:20,0:20:57.20:0,57,2326	0/0:8,0:8:24.08:0,24,1027	0/0:31,0:31:90.31:0,90,3927	0/0:13,0:13:39.13:0,39,1504	0/0:25,0:25:74.28:0,74,2939	0/0:17,0:17:48.16:0,48,2124	0/0:8,0:8:24.08:0,24,1012
chr10	5190470	.	A	AT	5041.27	PASS	AB=0.545;AC=17;AF=0.304;AN=56;BaseQRankSum=-8.612;DP=606;FS=0.000;HRun=10;HaplotypeScore=58.0563;InbreedingCoeff=0.9402;MQ=67.59;MQ0=0;MQRankSum=-5.469;QD=23.89;ReadPosRankSum=-0.055;VQSLOD=5.2544;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:75,0:75:99:0,170,1403	0/0:6,0:6:14.98:0,15,123	0/0:10,0:11:14.01:0,14,104	0/0:8,0:9:13.62:0,14,151	0/0:26,0:26:65.89:0,66,542	0/0:17,0:17:35.95:0,36,296	0/0:17,0:17:44.92:0,45,366	1/1:6,34:40:99:1064,102,0	0/0:21,0:21:53.93:0,54,443	0/0:21,0:21:53.94:0,54,443	0/0:21,0:21:59.92:0,60,490	0/0:20,0:20:47.94:0,48,394	0/0:12,0:12:32.96:0,33,271	0/0:18,0:18:47.89:0,48,385	1/1:2,18:20:51.12:541,51,0	1/1:2,10:12:24.06:256,24,0	1/1:2,27:29:66.17:704,66,0	1/1:3,20:23:32.50:551,33,0	0/0:28,0:28:74.86:0,75,609	0/0:17,0:17:41.95:0,42,345	0/0:15,0:15:41.95:0,42,345	0/0:19,0:19:44.92:0,45,369	0/0:24,0:24:65.86:0,66,533	0/0:17,0:18:43.98:0,44,350	1/1:5,28:33:53.56:775,54,0	0/1:4,20:23:1.68:377,0,2	1/1:4,19:23:32.51:551,33,0	1/1:0,7:7:21.05:224,21,0
chr10	5190638	.	GCA	G	381.99	PASS	AB=0.917;AC=11;AF=0.196;AN=56;BaseQRankSum=5.279;DP=663;FS=0.587;HRun=0;HaplotypeScore=142.0190;InbreedingCoeff=-0.0565;MQ=56.80;MQ0=10;MQRankSum=-1.506;QD=1.61;ReadPosRankSum=0.439;VQSLOD=2.0462;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:51,2:53:21.47:0,21,804	0/0:3,0:3:3.01:0,3,44	0/0:24,0:7:1.25:0,1,3	0/0:27,0:12:0.85:0,1,37	0/0:23,0:23:59.57:0,60,915	0/0:15,0:15:33.11:0,33,524	0/0:38,2:40:24.37:0,24,1334	0/1:11,0:14:34.09:34,0,51	0/0:18,1:19:15.19:0,15,722	0/0:20,0:20:18.98:0,19,445	0/0:20,1:21:18.19:0,18,755	0/1:26,3:29:44.69:45,0,800	0/1:23,1:24:47.70:48,0,745	0/1:28,1:30:2.08:2,0,1028	0/0:21,0:21:0.86:0,1,36	0/1:15,0:15:6.97:7,0,13	1/1:8,8:14:6.20:244,6,0	0/0:11,0:11:17.32:0,17,145	0/0:24,0:22:48.12:0,48,710	0/1:11,3:14:71.50:71,0,388	0/1:60,4:65:38.59:39,0,1793	0/1:17,1:18:23.85:24,0,595	0/1:10,1:11:5.88:6,0,376	0/0:37,2:39:21.27:0,21,1234	0/0:27,0:27:13.27:0,13,106	0/0:27,0:27:36.13:0,36,586	0/0:21,0:21:39.78:0,40,439	0/0:11,0:11:26.74:0,27,262
chr10	5190660	.	G	GCACACACTCA	5656.79	PASS	AB=0.965;AC=12;AF=0.214;AN=56;BaseQRankSum=8.920;DP=926;FS=7.224;HRun=0;HaplotypeScore=314.6178;InbreedingCoeff=0.3226;MQ=46.02;MQ0=19;MQRankSum=-12.751;QD=16.84;ReadPosRankSum=-2.958;VQSLOD=2.3713;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:45.26:0,45,681	0/0:5,0:5:9.02:0,9,158	0/0:40,0:7:14.82:0,15,201	0/0:49,0:15:27.77:0,28,424	0/0:27,0:27:75.26:0,75,2105	0/0:18,0:18:45.15:0,45,1092	0/0:41,0:41:99:0,108,2729	0/1:43,0:40:56.91:513,0,57	0/0:20,0:20:57.19:0,57,1389	0/0:21,0:21:54.18:0,54,1285	0/0:23,0:23:57.09:0,57,1487	0/0:31,0:31:76.85:0,77,2049	0/0:26,0:26:69.19:0,69,1770	0/0:33,0:33:89.52:0,90,2324	1/1:46,2:48:9.28:251,9,0	1/1:34,0:34:10.38:63,10,0	0/1:25,0:22:63.67:64,0,391	0/1:19,0:19:34.51:676,0,35	0/0:37,0:33:76.64:0,77,1378	0/0:16,0:16:42.14:0,42,1090	0/0:77,0:76:99:0,180,4555	0/0:20,0:20:57.19:0,57,1523	0/0:13,0:13:36.10:0,36,846	0/0:41,0:41:99:0,111,2661	1/1:45,2:47:15.52:367,16,0	0/1:57,3:59:99:1556,0,286	0/1:38,3:40:41.72:1528,0,42	0/1:17,2:19:27.82:639,0,28
chr10	5190680	.	A	ACACT	845.62	PASS	AB=0.972;AC=11;AF=0.196;AN=56;BaseQRankSum=7.433;DP=970;FS=19.818;HRun=0;HaplotypeScore=258.4298;InbreedingCoeff=0.1469;MQ=45.37;MQ0=14;MQRankSum=-6.581;QD=2.20;ReadPosRankSum=-5.736;VQSLOD=0.1021;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:45,0:45:16.99:211,17,0	0/0:6,0:6:18.05:0,18,323	0/0:41,0:11:29.12:0,29,485	0/0:63,0:19:48.16:0,48,873	0/0:29,0:29:87.27:0,87,1618	0/0:14,0:14:39.13:0,39,778	0/0:45,0:45:99:0,132,2473	0/0:58,0:56:1.26:0,1,1445	0/0:18,0:18:54.19:0,54,1064	0/0:22,0:22:57.18:0,57,1056	0/0:19,0:18:51.16:0,51,971	0/0:31,0:31:75.17:0,75,1402	0/0:27,0:27:75.22:0,75,1401	0/0:27,0:27:81.28:0,81,1592	0/1:58,0:58:34.86:74,0,35	0/1:40,0:40:20.63:21,0,75	0/1:21,3:23:99:171,0,120	0/1:19,2:21:99:268,0,103	0/0:24,0:21:63.14:0,63,1135	0/0:13,0:13:39.12:0,39,742	0/0:84,0:83:99:0,201,3824	0/0:19,0:19:57.18:0,57,1062	0/0:10,0:10:30.10:0,30,598	0/0:35,0:35:99:0,102,2025	1/1:55,0:55:2.72:25,3,0	0/1:74,0:72:99:120,0,1450	0/1:48,0:47:99:102,0,585	0/1:20,0:20:0.34:0,0,360
chr10	5190700	.	TCA	T	1237.52	PASS	AB=0.866;AC=8;AF=0.143;AN=56;BaseQRankSum=7.403;DP=946;FS=0.507;HRun=0;HaplotypeScore=230.2656;InbreedingCoeff=0.0801;MQ=47.21;MQ0=13;MQRankSum=-10.346;QD=4.45;ReadPosRankSum=-0.753;VQSLOD=2.5545;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,2:39:2.74:0,3,12	0/0:6,0:6:18.06:0,18,312	0/0:31,0:11:17.80:0,18,225	0/0:49,0:13:24.04:0,24,337	0/0:21,0:21:54.17:0,54,891	0/0:18,0:18:45.02:0,45,746	0/0:46,0:46:91.38:0,91,1761	0/1:19,25:43:99:626,0,177	0/0:15,0:15:42.08:0,42,662	0/0:26,0:26:63.20:0,63,1035	0/0:18,0:17:48.15:0,48,800	0/0:29,0:29:66.20:0,66,1137	0/0:31,0:31:80.85:0,81,1302	0/0:24,0:24:60.20:0,60,1021	0/0:48,8:56:9.36:0,9,80	1/1:35,6:41:9.62:149,10,0	0/1:26,2:26:59.55:60,0,72	0/1:25,1:26:41.47:41,0,134	0/0:31,0:29:69.71:0,70,1161	0/0:13,0:11:30.10:0,30,519	0/0:95,0:94:99:0,204,3369	0/0:18,0:18:54.18:0,54,903	0/0:10,0:10:27.09:0,27,467	0/0:35,0:35:96.31:0,96,1600	0/0:46,11:57:11.16:0,11,80	0/1:68,5:69:99:229,0,504	0/1:39,10:48:99:234,0,219	0/1:15,2:17:35.70:36,0,117
chr10	5190708	.	ACT	A	1145.39	PASS	AB=0.986;AC=13;AF=0.232;AN=56;BaseQRankSum=12.597;DP=897;FS=0.000;HRun=0;HaplotypeScore=218.4582;InbreedingCoeff=0.3357;MQ=47.60;MQ0=14;MQRankSum=-12.946;QD=2.79;ReadPosRankSum=-1.596;VQSLOD=2.2147;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:39,1:39:13.52:101,14,0	0/0:8,0:8:21.75:0,22,361	0/0:27,0:8:17.71:0,18,234	0/0:46,1:9:10.70:0,11,235	0/0:18,0:18:54.17:0,54,987	0/0:17,0:17:45.01:0,45,827	0/0:40,0:40:99:0,102,1971	0/1:36,0:36:79.69:254,0,80	0/0:16,0:16:44.91:0,45,755	0/0:24,0:24:62.70:0,63,1179	0/0:16,0:15:45.15:0,45,849	0/0:25,0:25:69.20:0,69,1293	0/0:29,0:29:72.16:0,72,1444	0/0:23,0:23:66.20:0,66,1181	0/1:56,0:56:1.61:28,0,2	1/1:40,0:40:16.77:117,17,0	0/1:24,3:24:10.98:171,0,11	1/1:30,0:30:0.26:98,0,0	0/0:28,0:28:61.55:0,62,1338	0/0:14,0:12:36.08:0,36,618	0/0:94,0:93:99:0,216,3679	0/0:18,0:18:54.17:0,54,965	0/0:9,0:9:27.09:0,27,518	0/0:34,0:34:96.30:0,96,1724	0/1:57,0:57:2.10:9,0,2	0/1:61,0:57:99:273,0,116	0/1:46,0:45:66.53:222,0,67	0/1:17,0:17:31.34:31,0,56
chr10	5190710	.	TCA	T	1829.06	PASS	AB=0.918;AC=13;AF=0.232;AN=56;BaseQRankSum=13.547;DP=889;FS=9.138;HRun=0;HaplotypeScore=212.6844;InbreedingCoeff=0.4251;MQ=49.27;MQ0=13;MQRankSum=-11.230;QD=4.64;ReadPosRankSum=0.068;VQSLOD=1.8969;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:33,2:40:2.47:2,0,17	0/0:8,0:8:24.06:0,24,404	0/1:27,0:10:11.44:11,0,203	0/0:47,0:9:19.81:0,20,275	0/0:19,0:19:57.18:0,57,1038	0/0:16,0:16:42.01:0,42,806	0/0:41,0:41:99:0,110,2026	0/0:32,0:32:17.53:0,18,85	0/0:16,0:16:47.88:0,48,824	0/0:24,0:24:58.10:0,58,1151	0/0:16,0:15:45.15:0,45,837	0/0:27,0:27:75.22:0,75,1392	0/0:29,0:29:80.30:0,80,1490	0/0:23,0:23:66.23:0,66,1225	1/1:48,3:55:14.16:113,14,0	1/1:29,6:40:7.67:78,8,0	0/1:20,3:24:0.46:177,0,0	1/1:27,2:29:10.03:323,10,0	0/0:27,0:27:78.71:0,79,1409	0/0:15,0:13:36.12:0,36,635	0/0:94,0:93:99:0,202,3525	0/0:19,0:19:54.16:0,54,940	0/0:9,0:9:27.09:0,27,511	0/0:33,0:33:96.24:0,96,1658	0/1:45,8:56:0.37:91,0,0	0/1:46,11:55:11.83:651,0,12	0/1:39,4:44:21.75:370,0,22	0/1:14,1:15:80.25:173,0,80
chr10	5190712	.	ACT	A	3224.61	PASS	AB=0.791;AC=16;AF=0.286;AN=56;BaseQRankSum=12.207;DP=900;FS=9.520;HRun=0;HaplotypeScore=209.7678;InbreedingCoeff=0.4532;MQ=49.77;MQ0=15;MQRankSum=-11.483;QD=7.46;ReadPosRankSum=-0.924;VQSLOD=2.3304;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:43,0:42:16.48:125,16,0	0/0:8,0:8:24.08:0,24,435	0/1:25,2:10:35.11:35,0,152	0/0:51,0:11:13.82:0,14,185	0/0:19,0:19:57.18:0,57,1044	0/0:17,0:16:42.01:0,42,778	0/0:41,0:41:99:0,113,1938	0/1:35,0:34:49.62:50,0,278	0/0:18,0:18:54.13:0,54,915	0/0:24,0:24:62.62:0,63,1159	0/0:16,0:15:45.11:0,45,761	0/0:29,0:29:81.25:0,81,1452	0/0:29,0:29:69.29:0,69,1383	0/0:23,0:23:66.18:0,66,1124	1/1:30,26:56:14.79:196,15,0	0/1:31,11:42:21.36:71,0,21	1/1:24,3:25:14.03:138,14,0	1/1:9,21:30:10.69:577,11,0	0/0:28,0:28:61.62:0,62,1300	0/0:15,0:13:36:0,36,535	0/0:91,0:90:99:0,201,2776	0/0:18,0:18:48.12:0,48,824	0/0:9,0:9:27.08:0,27,487	0/0:32,0:32:87.22:0,87,1519	1/1:34,21:55:19.42:256,19,0	0/1:34,25:55:29.80:1090,0,30	0/1:21,21:41:74.42:560,0,74	0/1:7,8:15:60.61:315,0,61
chr10	5190722	.	TCA	T	1484.65	PASS	AB=0.924;AC=12;AF=0.214;AN=56;BaseQRankSum=3.558;DP=933;FS=8.503;HRun=0;HaplotypeScore=219.0581;InbreedingCoeff=0.0893;MQ=49.52;MQ0=21;MQRankSum=1.988;QD=4.55;ReadPosRankSum=2.239;VQSLOD=1.9549;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:39:4.44:0,4,46	0/1:8,0:9:11.08:11,0,279	0/0:35,1:9:14.09:0,14,110	0/0:57,0:15:2.40:0,2,31	0/0:22,0:22:43.02:0,43,643	0/1:16,2:17:8.20:8,0,348	0/1:38,3:41:7.14:7,0,767	0/0:26,0:25:14.75:0,15,105	0/1:20,2:22:10.10:10,0,781	0/0:24,0:24:39.13:0,39,591	0/0:16,0:16:27.61:0,28,414	0/0:32,0:32:72.23:0,72,1100	0/1:26,2:28:16.11:16,0,668	0/1:20,3:23:60.32:60,0,485	0/0:57,0:57:22.54:0,23,299	1/1:43,0:43:8.29:63,8,0	0/0:29,0:26:8.09:0,8,43	0/1:32,0:32:31.13:31,0,270	0/0:26,2:28:4.27:0,4,456	0/1:11,3:12:46.22:46,0,247	1/1:34,61:94:99:1384,120,0	0/0:17,0:17:33.10:0,33,497	0/0:12,0:12:18.05:0,18,256	0/0:32,1:34:31.68:0,32,1029	0/0:55,0:55:8.58:0,9,184	0/0:63,0:59:20.29:0,20,501	0/0:44,0:43:45.84:0,46,330	0/0:15,0:15:17.62:0,18,105
chr10	5190746	.	ACG	A	2168.85	PASS	AB=0.978;AC=12;AF=0.214;AN=56;BaseQRankSum=11.849;DP=893;FS=38.928;HRun=0;HaplotypeScore=180.9266;InbreedingCoeff=0.4023;MQ=58.72;MQ0=16;MQRankSum=-7.771;QD=6.06;ReadPosRankSum=-1.121;VQSLOD=1.5516;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:56.45:0,56,455	0/0:8,0:8:13.51:0,14,378	0/0:57,0:25:47.42:0,47,462	0/0:63,0:29:19.77:0,20,330	0/0:22,0:22:60.03:0,60,936	0/0:20,0:19:37.28:0,37,596	0/0:39,0:39:76.89:0,77,1350	0/0:32,0:31:78.83:0,79,629	0/0:26,0:26:53.92:0,54,1153	0/0:24,0:24:71.99:0,72,1008	0/0:19,0:19:56.88:0,57,770	0/0:36,0:36:99:0,105,1639	0/0:25,0:25:34.03:0,34,995	0/0:22,0:22:28.39:0,28,791	0/1:43,2:45:42.26:258,0,42	1/1:29,7:36:50.73:427,51,0	1/1:26,0:24:27.14:215,27,0	0/1:25,2:27:1.02:290,0,1	0/0:24,0:24:44.66:0,45,809	0/0:14,0:14:2.16:0,2,404	0/1:84,0:83:99:361,0,238	0/0:21,0:21:54.01:0,54,812	0/0:12,0:12:29.96:0,30,376	0/0:32,0:32:77.84:0,78,1392	0/1:41,0:41:13.16:214,0,13	0/1:48,1:49:99:326,0,144	0/1:36,0:35:14.59:136,0,15	1/1:14,0:14:15.53:110,16,0
chr10	5192308	.	CAT	C	56.31	PASS	AB=0.935;AC=25;AF=0.521;AN=48;BaseQRankSum=2.011;DP=343;FS=1.762;HRun=0;HaplotypeScore=69.1384;InbreedingCoeff=0.1753;MQ=55.10;MQ0=11;MQRankSum=-1.160;QD=0.21;ReadPosRankSum=0.096;VQSLOD=1.6043;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,1:10:0.21:1,0,0	./.	0/0:21,0:7:16.48:0,16,223	0/1:24,0:11:9.46:9,0,121	0/0:10,1:8:0:0,0,0	1/1:4,0:2:2.74:12,3,0	1/1:9,0:4:2.74:12,3,0	0/0:16,0:5:1.39:0,1,10	0/0:8,0:4:2.84:0,3,14	1/1:8,1:3:2.38:10,2,0	1/1:7,0:5:0.93:2,1,0	0/1:13,1:11:2.07:14,0,2	0/1:5,1:5:0:0,0,0	0/1:6,0:5:0:1,0,0	./.	0/0:1,0:1:3.01:0,3,32	0/1:4,0:2:0:0,0,0	0/1:9,0:7:10.64:45,0,11	0/1:7,0:4:5.80:6,0,52	0/1:6,1:5:0:0,0,0	1/1:77,4:56:0.47:2,0,0	0/1:14,1:7:0:0,0,0	./.	0/1:19,2:16:0.12:0,0,1	1/1:4,1:5:5.34:28,5,0	0/1:18,0:13:1.88:16,0,2	./.	0/0:2,0:1:0.89:0,1,2
chr10	5192314	.	ACATTTT	A	647.12	PASS	AB=0.960;AC=37;AF=0.771;AN=48;BaseQRankSum=3.939;DP=347;FS=51.800;HRun=0;HaplotypeScore=72.8837;InbreedingCoeff=0.3137;MQ=58.07;MQ0=12;MQRankSum=-2.272;QD=2.24;ReadPosRankSum=1.640;VQSLOD=-0.3831;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:12,0:10:4.18:22,4,0	./.	0/1:23,0:8:2.34:2,0,535	0/0:29,0:13:14.62:0,15,484	0/0:10,0:8:0:0,0,0	1/1:4,0:2:2.37:8,2,0	1/1:9,0:4:5.23:42,5,0	0/1:13,2:4:0.72:60,0,1	1/1:8,0:4:2.37:8,2,0	1/1:10,0:3:6.01:64,6,0	1/1:5,0:5:4.19:44,4,0	1/1:14,0:11:8.39:66,8,0	0/1:8,0:5:0:0,0,0	1/1:5,0:5:3.20:13,3,0	./.	0/1:2,0:1:0:0,0,0	0/1:4,0:2:0:0,0,0	1/1:9,0:7:9.50:143,9,0	1/1:8,0:4:2.22:7,2,0	1/1:6,0:4:1.55:4,2,0	1/1:70,6:55:3.61:21,4,0	0/1:14,0:7:0:0,0,0	./.	0/1:20,1:17:0.34:0,0,0	1/1:6,0:5:5.14:45,5,0	1/1:18,0:13:20.77:174,21,0	./.	1/1:2,0:1:2.98:22,3,0
chr10	5192317	.	TTTTCC	T	575.42	PASS	AB=0.952;AC=31;AF=0.738;AN=42;BaseQRankSum=3.144;DP=320;FS=41.688;HRun=0;HaplotypeScore=72.2566;InbreedingCoeff=0.4250;MQ=61.81;MQ0=12;MQRankSum=-2.497;QD=2.53;ReadPosRankSum=1.479;VQSLOD=-0.4384;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,0:9:3.09:14,3,0	./.	0/0:25,0:9:12.81:0,13,509	0/0:31,0:13:17.65:0,18,483	./.	1/1:3,0:2:2.80:13,3,0	1/1:9,0:4:5.60:40,6,0	1/1:12,0:2:3:27,3,0	0/0:7,0:4:1.82:0,2,5	1/1:10,0:4:6.02:75,6,0	1/1:3,1:4:3.79:40,4,0	1/1:14,0:11:4.53:126,5,0	0/1:8,0:5:0.01:0,0,0	1/1:4,0:4:2.02:6,2,0	./.	./.	0/1:4,0:2:0:0,0,0	1/1:8,0:7:9.44:89,9,0	1/1:5,0:2:0.47:1,0,0	1/1:4,1:4:3:25,3,0	0/1:67,1:50:0.39:0,0,1	0/1:11,1:7:0:0,0,0	./.	0/1:21,0:17:0.23:1,0,0	1/1:5,0:5:5.27:72,5,0	1/1:12,0:10:20.42:156,20,0	./.	./.
chr10	5192334	.	CAT	C	253.40	PASS	AB=0.955;AC=28;AF=0.538;AN=52;BaseQRankSum=3.989;DP=700;FS=5.948;HRun=0;HaplotypeScore=111.8802;InbreedingCoeff=0.0922;MQ=37.08;MQ0=143;MQRankSum=-1.740;QD=0.62;ReadPosRankSum=-0.158;VQSLOD=1.8214;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:17,3:16:11.03:47,0,11	./.	0/1:39,0:6:14.52:15,0,35	0/1:45,1:11:28.93:29,0,80	0/0:17,2:9:0:0,0,0	1/1:10,0:5:5.78:35,6,0	0/0:27,0:16:4.86:0,5,135	0/0:44,0:5:8.89:0,9,61	1/1:20,1:8:1.25:3,1,0	0/1:21,1:9:25.77:26,0,45	1/1:10,1:7:2.68:8,3,0	0/1:23,1:14:4.65:28,0,5	0/0:20,1:13:5.25:0,5,33	0/1:17,0:12:0.17:1,0,0	1/1:16,0:9:2.98:21,3,0	0/1:11,0:7:0:0,0,0	1/1:13,0:7:1.82:5,2,0	0/1:17,1:13:16.29:16,0,21	1/1:22,0:4:3:25,3,0	0/0:18,0:10:2.19:0,2,18	0/0:137,3:89:10.67:0,11,108	0/1:18,1:9:0:0,0,0	0/0:18,0:8:0:0,0,0	1/1:41,3:33:1.45:4,1,0	1/1:12,1:6:7.94:39,8,0	0/1:32,1:19:4.03:62,0,4	1/1:5,0:3:2.92:17,3,0	./.
chr10	5192335	.	ATAC	A	283.76	PASS	AB=0.950;AC=21;AF=0.389;AN=54;BaseQRankSum=1.703;DP=704;FS=1.546;HRun=0;HaplotypeScore=110.2356;InbreedingCoeff=0.0639;MQ=36.95;MQ0=153;MQRankSum=-0.834;QD=0.58;ReadPosRankSum=-0.864;VQSLOD=2.2313;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,2:16:7.51:0,8,70	0/0:5,0:3:0:0,0,0	0/1:35,0:5:8.74:9,0,69	0/1:47,0:11:15.99:16,0,107	0/1:18,0:9:0:0,0,0	1/1:10,1:6:2.69:22,3,0	0/0:24,1:15:0.57:0,1,232	0/0:41,0:4:12.04:0,12,195	0/0:20,1:8:2.92:0,3,17	0/0:22,1:8:4.52:0,5,84	1/1:11,0:7:2.89:29,3,0	0/1:23,2:15:0.62:50,0,1	0/0:17,4:13:4.04:0,4,67	0/1:17,0:12:0.15:0,0,0	0/0:16,0:9:2.03:0,2,6	0/1:8,3:7:0:0,0,0	0/1:13,1:7:4.58:35,0,5	0/1:18,1:13:55.46:55,0,90	0/0:22,0:4:0.89:0,1,2	0/0:17,0:10:5.92:0,6,77	0/1:137,4:88:10.71:11,0,314	0/1:18,1:9:0:0,0,0	0/1:19,0:8:0.20:0,0,0	0/1:43,2:33:5.46:11,0,5	1/1:12,1:7:5.02:41,5,0	0/1:33,0:19:66.35:120,0,66	1/1:5,0:3:2.04:6,2,0	./.
chr10	5192336	.	T	TAC	108.13	PASS	AB=0.986;AC=20;AF=0.435;AN=46;BaseQRankSum=3.776;DP=735;FS=11.309;HRun=0;HaplotypeScore=119.6672;InbreedingCoeff=0.0868;MQ=36.40;MQ0=167;MQRankSum=-2.757;QD=0.23;ReadPosRankSum=2.366;VQSLOD=1.9197;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:17:14.25:27,0,14	./.	0/0:34,0:5:8.59:0,9,82	0/0:47,0:11:4.98:0,5,72	./.	1/1:13,0:7:0.58:21,1,0	0/0:27,0:16:13.21:0,13,123	0/0:42,0:4:8.97:0,9,96	1/1:23,0:10:2.98:22,3,0	0/0:24,0:9:4.35:0,4,47	0/0:13,0:8:3.15:0,3,12	0/1:26,0:15:6.52:34,0,7	0/1:18,1:13:11.70:12,0,37	0/1:17,1:13:0.04:0,0,0	1/1:17,0:9:0.94:2,1,0	./.	0/1:15,0:7:0.11:0,0,1	0/1:20,1:13:18.21:18,0,40	1/1:27,0:5:2.50:9,2,0	0/1:18,0:11:0.58:1,0,33	0/1:144,0:88:0.19:0,0,150	0/1:21,0:10:0:0,0,0	./.	1/1:46,1:34:4.17:20,4,0	0/0:14,0:7:2.92:0,3,8	0/1:32,0:19:37.83:58,0,38	0/0:5,0:3:0.47:0,0,1	./.
chr10	5192408	.	ACAC	A	76.51	PASS	AB=0.988;AC=11;AF=0.204;AN=54;BaseQRankSum=6.242;DP=2172;DS;FS=10.785;HRun=0;HaplotypeScore=272.0068;InbreedingCoeff=-0.0368;MQ=19.75;MQ0=632;MQRankSum=-5.376;QD=0.10;ReadPosRankSum=-0.457;VQSLOD=1.1092;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:79,0:37:20.01:0,20,334	1/1:37,0:11:1.55:5,2,0	0/0:13,0:2:3.01:0,3,65	./.	0/0:37,0:11:3.95:0,4,50	0/1:76,0:43:26.63:27,0,397	0/1:189,1:100:36.48:36,0,999	0/0:121,0:18:10.54:0,11,93	0/0:81,0:39:13.11:0,13,492	0/1:124,0:42:31.96:32,0,1013	1/1:42,0:15:2.90:35,3,0	0/1:93,1:41:23.30:23,0,285	0/0:80,0:43:5.40:0,5,309	0/1:68,2:36:9.20:9,0,143	0/1:68,0:23:11.32:11,0,77	0/0:65,0:25:20.53:0,21,207	0/0:65,0:31:1.90:0,2,445	0/1:44,1:31:30.28:30,0,259	0/0:94,0:11:21.07:0,21,324	0/0:60,0:22:21.30:0,21,289	0/0:247,1:135:69.47:0,69,1052	0/0:65,0:27:1.04:0,1,219	0/0:58,0:27:9.64:0,10,177	0/0:127,0:84:61.77:0,62,894	0/0:48,0:16:9.08:0,9,118	0/0:110,0:39:56.17:0,56,759	0/0:29,0:13:11.35:0,11,139	0/0:23,0:11:14.89:0,15,173
chr10	5192424	.	C	CAT	170.50	PASS	AB=0.977;AC=12;AF=0.222;AN=54;BaseQRankSum=0.993;DP=2342;DS;FS=9.664;HRun=0;HaplotypeScore=296.8535;InbreedingCoeff=-0.1801;MQ=19.90;MQ0=746;MQRankSum=-2.896;QD=0.20;ReadPosRankSum=-1.112;VQSLOD=0.4898;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:108,1:52:33.60:0,34,339	0/0:38,1:12:9.81:0,10,71	0/0:2,0:1:3.01:0,3,44	./.	0/0:43,0:12:8.86:0,9,67	0/1:90,4:51:52.77:53,0,322	0/0:204,4:104:92.92:0,93,998	0/0:122,0:13:9.63:0,10,51	0/0:98,1:38:31.87:0,32,354	0/1:120,3:40:66.22:66,0,768	1/1:38,0:14:2.84:14,3,0	0/1:100,3:42:16.84:17,0,242	0/0:85,1:50:35.41:0,35,324	0/1:77,2:39:29.69:30,0,200	0/0:58,1:16:0.96:0,1,33	0/1:63,0:24:5.57:6,0,166	0/0:73,0:40:32.27:0,32,424	0/1:62,1:37:4.76:5,0,393	0/1:112,1:13:72.88:73,0,193	0/0:62,0:25:5.22:0,5,229	0/0:250,0:120:0.84:0,1,482	0/0:67,5:32:17:0,17,170	0/0:56,1:24:9.92:0,10,129	0/0:163,2:102:37.32:0,37,662	0/1:56,2:21:9.71:10,0,111	0/1:102,1:24:25.78:26,0,381	0/1:30,1:13:8.46:8,0,116	0/0:21,0:7:14.76:0,15,142
chr10	5192489	.	C	CCA	261.14	PASS	AB=0.979;AC=17;AF=0.327;AN=52;BaseQRankSum=3.844;DP=2717;DS;FS=0.000;HRun=0;HaplotypeScore=326.7797;InbreedingCoeff=-0.2078;MQ=19.42;MQ0=835;MQRankSum=-3.195;QD=0.16;ReadPosRankSum=0.347;VQSLOD=1.5219;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:112,0:49:30.57:31,0,162	1/1:46,2:16:1.71:4,2,0	./.	./.	0/0:65,1:30:9.03:0,9,110	0/1:88,0:44:40.64:41,0,178	0/0:215,0:115:32.59:0,33,774	0/0:132,0:15:17.67:0,18,86	0/1:85,2:38:99:106,0,195	0/1:161,2:47:16.76:17,0,585	0/0:55,0:24:5.97:0,6,59	0/1:113,2:47:1.04:1,0,137	0/1:95,0:36:2.35:2,0,186	0/0:116,0:53:24.68:0,25,330	0/1:85,0:35:7.31:7,0,126	0/0:95,0:41:3.14:0,3,153	0/1:89,1:51:48.61:49,0,366	0/0:77,0:42:50.37:0,50,648	0/1:106,0:12:19.30:19,0,50	0/1:75,1:36:41.71:45,0,42	0/1:246,1:119:20.47:20,0,324	0/1:80,2:48:0.95:1,0,82	1/1:53,2:25:3.64:46,4,0	0/0:170,0:105:11.94:0,12,398	0/0:74,0:24:16.46:0,16,143	0/1:141,1:49:10.78:11,0,522	0/0:41,1:21:12.67:0,13,143	0/0:43,0:15:4.78:0,5,108
chr10	5192498	.	C	CCA	397.98	PASS	AB=0.969;AC=17;AF=0.327;AN=52;BaseQRankSum=3.372;DP=2701;DS;FS=10.502;HRun=0;HaplotypeScore=322.5517;InbreedingCoeff=-0.2589;MQ=19.33;MQ0=826;MQRankSum=-5.257;QD=0.23;ReadPosRankSum=-2.584;VQSLOD=0.9002;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:111,1:47:6.79:0,7,113	0/1:42,0:12:0:0,0,0	./.	./.	0/0:60,0:28:8.69:0,9,65	0/1:79,1:40:58.34:58,0,221	0/0:207,2:111:51.28:0,51,765	0/0:142,0:18:12.19:0,12,124	0/1:88,4:41:33.23:33,0,311	0/1:152,2:47:43.72:44,0,472	0/0:50,0:23:6.02:0,6,71	0/1:114,2:46:18.09:18,0,242	0/1:93,1:34:20.50:20,0,136	0/1:116,3:56:2.87:3,0,197	0/0:93,0:37:9.57:0,10,127	0/1:88,1:37:41.70:42,0,131	0/1:85,1:48:33.47:33,0,329	0/0:73,1:41:49.89:0,50,550	0/1:112,1:12:3.56:46,0,4	1/1:64,1:28:2.77:49,3,0	0/1:240,2:122:36.04:36,0,485	0/0:82,2:47:3.12:0,3,64	0/1:56,2:25:3.11:59,0,3	0/1:160,2:102:31.21:31,0,463	0/0:74,0:23:7.57:0,8,77	0/1:152,0:55:47.69:48,0,385	0/1:40,1:21:20.16:20,0,104	0/0:43,0:13:11.99:0,12,113
chr10	5192511	.	CCA	C	66.42	PASS	AB=0.974;AC=10;AF=0.192;AN=52;BaseQRankSum=4.321;DP=2605;DS;FS=12.784;HRun=0;HaplotypeScore=295.0519;InbreedingCoeff=-0.1307;MQ=19.00;MQ0=781;MQRankSum=-1.826;QD=0.09;ReadPosRankSum=-1.507;VQSLOD=0.7887;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:99,1:37:14.17:14,0,172	1/1:39,0:13:1.23:3,1,0	./.	./.	0/1:52,0:24:8.23:8,0,82	0/0:76,0:38:33.16:0,33,391	0/0:197,2:98:3.74:0,4,750	0/0:147,0:25:26.33:0,26,252	0/0:106,0:41:38.29:0,38,460	0/0:149,3:46:29.66:0,30,693	0/0:44,1:17:9.02:0,9,122	0/1:109,0:44:17.19:17,0,391	0/0:82,1:26:14.84:0,15,212	0/0:116,0:54:24.24:0,24,314	0/0:82,0:34:12.47:0,12,193	0/1:84,3:35:17.22:17,0,238	0/1:73,6:43:85.75:86,0,511	0/0:71,3:38:44.71:0,45,538	0/0:114,0:12:20.96:0,21,262	0/0:64,0:32:7.34:0,7,68	0/0:244,0:114:34.68:0,35,725	0/1:74,1:39:4.32:4,0,84	0/0:46,0:20:0.64:0,1,82	0/0:160,5:93:15.92:0,16,660	0/0:67,2:18:6.49:0,6,83	0/1:144,1:54:12.98:13,0,511	0/0:37,0:19:15.39:0,15,147	0/1:37,1:11:28.54:29,0,54
chr10	5192572	.	C	CACAT	148.95	PASS	AB=0.996;AC=10;AF=0.185;AN=54;BaseQRankSum=3.704;DP=1813;DS;FS=0.000;HRun=0;HaplotypeScore=209.9102;InbreedingCoeff=-0.1045;MQ=19.94;MQ0=613;MQRankSum=-2.819;QD=0.37;ReadPosRankSum=-2.131;VQSLOD=1.9872;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:68,0:24:19.51:20,0,160	0/1:16,0:6:46.92:47,0,52	./.	0/0:31,0:1:3.01:0,3,54	0/1:27,0:9:14.34:14,0,106	0/1:45,0:29:4.24:4,0,237	0/0:120,0:54:22.49:0,22,672	0/0:139,0:20:32.94:0,33,552	0/0:61,0:30:17.11:0,17,344	0/0:91,0:28:61.89:0,62,818	0/0:27,0:11:7.09:0,7,96	0/0:76,0:27:13.46:0,13,194	0/1:44,0:21:0.88:1,0,189	0/0:63,0:27:17.60:0,18,241	0/0:48,1:24:7.03:0,7,77	0/0:41,1:14:5.95:0,6,59	0/0:46,0:19:15.67:0,16,229	0/1:55,0:20:99:107,0,282	0/0:166,0:14:24.01:0,24,318	0/0:27,0:14:12.74:0,13,113	0/0:246,2:138:68.68:0,69,1023	0/1:36,0:17:10.02:10,0,52	0/0:19,0:9:3.01:0,3,46	0/0:147,1:92:55.06:0,55,1211	1/1:24,1:9:0.76:31,1,0	0/1:82,1:26:40.63:41,0,459	0/0:26,0:12:20.21:0,20,213	0/0:14,0:7:5.38:0,5,66
chr10	5192661	.	CCA	C	735.61	PASS	AB=0.941;AC=19;AF=0.365;AN=52;BaseQRankSum=0.765;DP=1795;DS;FS=61.721;HRun=0;HaplotypeScore=229.4460;InbreedingCoeff=-0.4261;MQ=22.69;MQ0=334;MQRankSum=-1.983;QD=0.68;ReadPosRankSum=3.141;VQSLOD=0.7473;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,1:22:12.68:0,13,93	0/1:18,0:8:28:28,0,63	./.	./.	0/0:33,5:24:0.47:0,0,1	0/1:37,1:25:20.81:21,0,207	0/1:118,4:79:8.51:9,0,708	0/0:135,0:40:43.63:0,44,401	0/1:62,7:41:9.74:10,0,168	0/1:116,5:60:99:278,0,450	1/1:23,0:14:6.02:69,6,0	0/1:84,5:53:36.76:37,0,432	0/1:53,7:38:99:106,0,170	0/1:68,6:48:56.86:57,0,231	0/1:51,3:25:18.59:19,0,53	0/0:49,1:22:13.07:0,13,182	0/1:38,3:25:45.99:56,0,46	0/1:29,0:16:22.30:22,0,162	0/1:98,2:17:90.35:111,0,90	0/1:38,4:25:18.24:18,0,100	0/0:243,3:157:12.07:0,12,638	0/1:46,1:31:25.87:26,0,62	0/0:26,3:16:5.86:0,6,75	0/0:86,4:61:1.41:0,1,126	0/1:34,0:21:0.62:1,0,71	0/1:88,2:43:6.61:7,0,652	0/0:17,0:8:5.61:0,6,53	0/1:5,1:2:6.43:6,0,17
chr10	5192689	.	CACAT	C	733.23	PASS	AB=0.986;AC=18;AF=0.360;AN=50;BaseQRankSum=3.030;DP=1528;DS;FS=9.505;HRun=0;HaplotypeScore=249.1658;InbreedingCoeff=-0.4102;MQ=21.18;MQ0=284;MQRankSum=-2.954;QD=0.74;ReadPosRankSum=-6.518;VQSLOD=-0.2575;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:36,1:25:51.45:100,0,51	0/0:12,0:6:8.89:0,9,100	./.	./.	0/0:31,1:21:2.69:0,3,13	0/1:26,0:14:0.64:1,0,61	0/0:116,2:78:67.36:0,67,1505	0/1:119,0:40:85.10:85,0,276	0/1:54,0:29:15.10:15,0,297	0/0:96,0:40:50.98:0,51,1171	./.	0/1:68,0:45:39.35:39,0,357	0/1:42,1:26:93.33:93,0,104	0/1:54,1:37:17.02:17,0,212	0/1:55,0:24:99:141,0,115	0/1:48,0:24:54.70:55,0,264	0/1:39,0:24:42.28:42,0,121	0/1:36,0:17:58.24:58,0,336	0/0:83,0:16:8.91:0,9,360	0/0:31,0:17:6.11:0,6,120	0/1:217,3:135:26:26,0,476	0/0:38,0:21:2.54:0,3,23	0/1:34,1:24:9.66:23,0,10	1/1:74,0:49:13.86:72,14,0	0/1:33,1:16:14.17:14,0,122	0/0:62,1:34:33.88:0,34,682	0/1:21,1:12:68.09:68,0,111	0/1:19,0:10:29.14:29,0,139
chr10	5192691	.	CAT	C	733.98	PASS	AB=0.950;AC=20;AF=0.400;AN=50;BaseQRankSum=2.184;DP=1475;DS;FS=8.043;HRun=0;HaplotypeScore=231.3176;InbreedingCoeff=-0.5415;MQ=21.10;MQ0=266;MQRankSum=-1.085;QD=0.65;ReadPosRankSum=-5.514;VQSLOD=0.0540;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:30,1:22:44.64:71,0,45	0/0:10,1:6:8.76:0,9,60	./.	./.	0/0:28,3:21:2.10:0,2,23	0/1:24,3:14:19.37:19,0,32	0/0:113,5:76:8.28:0,8,994	0/1:112,0:40:44.83:45,0,208	0/1:47,2:27:26.13:26,0,144	0/1:97,2:39:47.12:47,0,597	./.	0/1:58,10:43:48.54:49,0,178	0/1:37,5:24:73.40:93,0,73	0/1:48,3:36:50.80:51,0,123	0/1:53,0:24:72.97:93,0,73	0/1:46,3:24:14.45:14,0,142	0/1:36,1:24:42.70:43,0,60	0/1:33,0:17:78.32:78,0,191	0/1:80,0:16:2.62:3,0,147	0/0:25,2:15:4:0,4,62	0/1:213,4:132:16.11:16,0,350	0/0:36,3:20:2.68:0,3,28	0/1:28,4:22:13.09:19,0,13	1/1:62,8:47:18.33:141,18,0	0/1:35,0:17:11.80:12,0,109	0/0:59,0:31:26.41:0,26,469	0/1:20,1:12:37.10:37,0,50	0/1:18,1:10:22.10:22,0,39
chr10	5192803	.	ACAT	A	496.08	PASS	AB=0.978;AC=11;AF=0.196;AN=56;BaseQRankSum=10.338;DP=1406;DS;FS=43.594;HRun=0;HaplotypeScore=247.3483;InbreedingCoeff=-0.0537;MQ=36.62;MQ0=117;MQRankSum=-8.428;QD=1.10;ReadPosRankSum=-5.015;VQSLOD=0.2657;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:11:8.32:78,8,0	0/0:23,0:18:41.81:0,42,764	0/1:52,0:10:14.90:15,0,274	0/1:60,0:11:86.63:87,0,217	0/0:42,0:30:48.16:0,48,993	0/0:45,0:36:51.26:0,51,1197	0/1:103,0:78:99:197,0,1372	0/1:63,0:37:8.45:8,0,536	0/0:58,0:46:42.47:0,42,1452	0/0:80,0:51:69.32:0,69,1776	0/0:33,0:23:29.70:0,30,648	0/0:56,0:45:84.15:0,84,1614	0/0:44,0:35:34.26:0,34,1248	0/0:61,1:46:53.86:0,54,1140	0/1:26,1:18:0.05:0,0,147	0/1:38,0:26:53.97:54,0,161	0/1:28,0:22:99:138,0,106	0/0:27,0:18:6.68:0,7,241	0/0:44,0:18:29.98:0,30,580	0/0:46,0:33:11.45:0,11,575	0/0:221,1:185:99:0,287,6524	0/0:36,0:29:33.95:0,34,578	0/0:27,0:16:17.99:0,18,344	0/0:84,0:73:27.82:0,28,1553	0/0:17,0:14:0.65:0,1,30	0/1:42,0:24:42.54:43,0,334	0/0:8,0:5:5.17:0,5,59	0/1:15,2:11:17.45:17,0,145
chr10	5192810	.	ACACACAC	A	684.55	PASS	AB=0.986;AC=9;AF=0.161;AN=56;BaseQRankSum=6.674;DP=1361;DS;FS=1.737;HRun=0;HaplotypeScore=288.5789;InbreedingCoeff=0.2029;MQ=37.35;MQ0=94;MQRankSum=-6.667;QD=3.39;ReadPosRankSum=-1.529;VQSLOD=2.1999;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:16,0:11:8.07:69,0,8	0/0:23,0:18:32.66:0,33,1002	0/0:62,0:11:30.41:0,30,565	0/0:62,0:15:33:0,33,628	0/0:42,0:32:51.18:0,51,1793	0/0:44,0:35:55.29:0,55,1814	0/0:97,0:75:69.82:0,70,2498	0/1:48,4:30:99:332,0,124	0/0:57,0:48:88.90:0,89,2767	0/0:83,0:59:99:0,115,3555	0/0:29,0:22:23.85:0,24,774	0/0:53,0:43:75.08:0,75,2572	0/0:47,0:39:56.50:0,56,1867	0/0:55,0:44:59.32:0,59,1740	0/1:24,0:16:15.93:16,0,16	1/1:34,0:23:3.81:18,4,0	0/1:25,0:23:23.70:168,0,24	0/0:25,0:17:21.88:0,22,254	0/0:41,0:18:30.10:0,30,970	0/0:43,0:31:41.20:0,41,1330	0/0:221,0:186:99:0,310,10558	0/0:35,0:31:23.91:0,24,741	0/0:31,0:20:27.98:0,28,880	0/0:86,0:77:99:0,100,2917	1/1:15,0:11:1.04:17,1,0	0/1:33,0:20:99:197,0,226	0/0:6,0:4:2.60:0,3,11	0/0:11,0:9:11.22:0,11,122
chr10	5192826	.	C	CAT	61.39	PASS	AB=0.971;AC=4;AF=0.071;AN=56;BaseQRankSum=5.971;DP=1125;DS;FS=1.173;HRun=0;HaplotypeScore=202.6922;InbreedingCoeff=0.2995;MQ=39.18;MQ0=62;MQRankSum=-4.941;QD=1.62;ReadPosRankSum=-0.643;VQSLOD=2.6197;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:16:6.45:0,6,45	0/0:19,0:15:33.07:0,33,451	0/0:66,0:15:41.70:0,42,515	0/0:63,0:15:36.02:0,36,484	0/0:37,0:29:51.16:0,51,753	0/0:34,0:29:62.95:0,63,820	0/0:71,0:56:77.28:0,77,1092	0/0:39,0:25:25.57:0,26,271	0/0:52,0:47:99:0,106,1435	0/0:69,0:57:99:0,144,1952	0/0:22,0:16:18.06:0,18,275	0/0:43,1:40:75.24:0,75,1097	0/0:44,0:40:49.39:0,49,790	0/0:49,0:38:57.94:0,58,795	0/0:10,0:8:2.88:0,3,15	0/0:10,0:5:0:0,0,0	1/1:11,2:12:2.78:57,3,0	0/0:15,0:10:0.13:0,0,34	0/0:47,0:21:47.72:0,48,658	0/0:33,0:24:44.93:0,45,651	0/0:192,0:174:99:0,344,4833	0/0:33,0:31:23.95:0,24,359	0/0:22,0:16:27.05:0,27,387	0/0:78,0:74:84.61:0,85,1454	0/0:10,0:7:0:0,0,0	0/1:15,1:10:33.88:88,0,34	0/0:3,0:1:2.68:0,3,11	0/1:6,0:7:15.67:16,0,22
chr10	5192828	.	C	CAT	57.71	PASS	AB=1.000;AC=5;AF=0.096;AN=52;BaseQRankSum=5.708;DP=1088;DS;FS=1.105;HRun=0;HaplotypeScore=201.7337;InbreedingCoeff=0.5393;MQ=39.85;MQ0=57;MQRankSum=-2.576;QD=1.41;ReadPosRankSum=-3.658;VQSLOD=1.5957;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,5:16:14.98:134,15,0	0/0:17,0:15:33.07:0,33,426	0/0:67,0:15:38.08:0,38,432	0/0:62,0:15:30.04:0,30,401	0/0:36,0:29:57.14:0,57,757	0/0:32,0:28:56.91:0,57,707	0/0:66,0:54:74.43:0,74,1092	0/0:36,0:24:32.15:0,32,252	0/0:52,0:47:99:0,111,1409	0/0:67,0:55:99:0,138,1772	0/0:19,0:16:18.06:0,18,256	0/0:43,0:39:81.22:0,81,1083	0/0:42,0:38:42.46:0,42,692	0/0:46,0:36:56.84:0,57,717	0/0:7,0:6:2.88:0,3,15	./.	1/1:14,0:11:2.58:19,3,0	0/0:14,0:9:8.95:0,9,81	0/0:45,0:20:18.43:0,18,484	0/0:31,0:24:41.95:0,42,567	0/0:189,0:171:99:0,337,4340	0/0:33,0:31:23.95:0,24,338	0/0:22,0:16:24.08:0,24,343	0/0:77,0:72:99:0,104,1346	./.	0/0:16,0:10:6.28:0,6,51	0/0:3,0:1:2.60:0,3,10	0/1:7,0:7:15.71:16,0,22
chr10	5192852	.	TAC	T	1054.41	PASS	AB=0.952;AC=15;AF=0.278;AN=54;BaseQRankSum=5.579;DP=922;DS;FS=0.545;HRun=0;HaplotypeScore=173.9441;InbreedingCoeff=-0.0154;MQ=42.33;MQ0=41;MQRankSum=-1.430;QD=3.48;ReadPosRankSum=-3.855;VQSLOD=1.7900;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:10,16:24:29.73:328,30,0	0/1:14,0:13:16.30:16,0,253	0/0:51,0:11:8.76:0,9,92	0/0:49,0:10:5.99:0,6,73	0/0:29,0:28:45.14:0,45,728	0/1:31,3:32:52.97:53,0,735	0/0:51,1:47:31.72:0,32,1188	0/1:44,14:40:89.81:674,0,90	0/0:41,0:41:78.59:0,79,1449	0/0:50,1:46:52.86:0,53,1606	0/0:19,0:16:18.02:0,18,276	0/1:36,1:36:36.55:37,0,972	0/1:28,1:28:35.75:36,0,472	0/0:36,1:30:45.13:0,45,723	1/1:5,0:4:0.87:2,1,0	0/1:4,0:2:0:0,0,0	0/1:10,0:9:14.31:18,0,14	0/0:9,0:8:2.85:0,3,17	0/0:42,0:18:39.09:0,39,594	0/1:25,2:22:7.27:7,0,408	0/0:156,2:145:99:0,253,4548	0/1:29,2:31:8.13:8,0,425	0/1:16,1:16:11.26:11,0,313	0/0:64,1:62:58.48:0,58,1393	./.	0/1:10,0:9:5.70:8,0,6	0/0:1,0:1:1.55:0,2,4	0/0:6,0:4:2.76:0,3,18
chr10	5192864	.	C	CCA	431.16	PASS	AB=0.924;AC=10;AF=0.185;AN=54;BaseQRankSum=7.710;DP=921;DS;FS=4.907;HRun=0;HaplotypeScore=181.3587;InbreedingCoeff=0.3904;MQ=44.19;MQ0=45;MQRankSum=-6.674;QD=5.91;ReadPosRankSum=-5.268;VQSLOD=2.0332;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:27:35.20:0,35,352	0/0:11,0:10:7.60:0,8,141	0/0:51,0:9:17.53:0,18,189	0/0:48,0:7:7.99:0,8,88	0/0:27,0:26:42.12:0,42,526	0/0:33,0:32:32.10:0,32,557	0/0:51,0:45:85.92:0,86,1015	0/0:60,0:45:90:0,90,914	0/0:38,0:39:85.29:0,85,1009	0/0:53,0:47:99:0,102,1250	0/0:18,0:16:23.83:0,24,285	0/0:41,0:40:68.73:0,69,860	0/0:24,0:24:17.49:0,17,452	0/0:35,0:29:56.98:0,57,682	1/1:8,2:8:2.91:37,3,0	1/1:3,0:2:3.01:37,3,0	0/1:13,0:11:6.47:86,0,6	0/1:13,0:12:20.30:115,0,20	0/0:39,0:18:42.12:0,42,522	0/0:26,0:20:27.01:0,27,345	0/0:150,0:140:99:0,257,3205	0/0:32,0:31:38.67:0,39,460	0/0:15,0:14:21.07:0,21,267	0/0:60,0:58:87.26:0,87,1109	1/1:5,1:3:3.01:39,3,0	0/1:15,1:15:46.84:186,0,47	./.	0/1:7,1:6:4.47:66,0,4
chr10	5192937	.	CCA	C	4227.72	PASS	AB=0.960;AC=21;AF=0.375;AN=56;BaseQRankSum=9.516;DP=1194;FS=2.526;HRun=0;HaplotypeScore=195.0552;InbreedingCoeff=0.8795;MQ=42.06;MQ0=114;MQRankSum=-3.806;QD=11.55;ReadPosRankSum=0.583;VQSLOD=4.4916;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:42,2:40:58.35:668,58,0	0/0:17,0:14:34.35:0,34,496	0/0:45,0:11:22.20:0,22,327	0/0:51,0:15:12.30:0,12,462	0/0:39,1:38:1.54:0,2,498	0/0:24,0:24:51.95:0,52,759	0/0:46,0:39:78.19:0,78,1199	1/1:49,1:27:26.90:302,27,0	0/0:41,0:36:85.47:0,85,1290	0/0:83,0:57:93.17:0,93,1293	0/1:23,1:19:22.10:22,0,171	0/0:62,0:53:80.90:0,81,1500	0/0:22,0:20:10.95:0,11,434	0/0:35,0:29:45.82:0,46,956	1/1:30,13:36:14.64:259,15,0	1/1:19,12:23:23.44:248,23,0	1/1:15,0:24:40.38:203,40,0	1/1:7,10:15:31.51:458,32,0	0/0:42,0:14:27.04:0,27,399	0/0:36,0:26:37.37:0,37,578	0/0:149,3:139:99:0,170,3904	0/0:41,0:31:38.14:0,38,570	0/0:27,0:20:30.07:0,30,448	0/0:54,0:48:65.16:0,65,1350	1/1:15,17:25:45.62:536,46,0	1/1:32,20:39:38.20:905,38,0	1/1:5,17:18:23.73:297,24,0	1/1:12,7:14:23.50:328,24,0
chr10	5193002	.	TAC	T	364.78	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.196;DP=856;FS=14.670;HRun=0;HaplotypeScore=198.9180;InbreedingCoeff=0.8925;MQ=57.73;MQ0=5;MQRankSum=0.040;QD=18.24;ReadPosRankSum=-0.263;VQSLOD=2.4144;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,17:20:36.02:459,36,0	0/0:9,0:9:15.05:0,15,251	0/0:39,0:24:47.91:0,48,705	0/0:43,1:31:49.56:0,50,778	0/0:26,0:26:51.16:0,51,829	0/0:24,0:24:66.19:0,66,1056	0/0:25,0:25:68.60:0,69,1110	0/0:48,0:44:75.82:0,76,1249	0/0:31,0:31:80.47:0,80,1298	0/0:44,1:44:66.15:0,66,1614	0/0:14,0:13:30.09:0,30,459	0/0:32,0:32:81.23:0,81,1309	0/0:19,0:19:45.13:0,45,722	0/0:24,0:24:63.22:0,63,1058	0/0:41,0:41:63.03:0,63,967	0/0:37,0:35:66.15:0,66,1091	0/0:26,0:26:57.18:0,57,908	0/0:22,0:21:42.13:0,42,684	0/0:18,0:16:36.10:0,36,567	0/0:22,1:22:6.13:0,6,643	0/0:116,0:115:99:0,283,4650	0/0:25,0:23:53.38:0,53,834	0/0:19,0:18:36.11:0,36,572	0/0:36,0:36:99:0,102,1649	0/0:17,0:16:33.11:0,33,561	0/0:41,0:39:99:0,99,1416	0/0:19,0:19:35.09:0,35,497	0/0:13,0:13:28.95:0,29,393
chr10	5193020	.	T	TAC	3568.43	PASS	AB=0.700;AC=7;AF=0.125;AN=56;BaseQRankSum=6.555;DP=854;FS=12.300;HRun=0;HaplotypeScore=189.2735;InbreedingCoeff=-0.1487;MQ=56.60;MQ0=6;MQRankSum=-3.444;QD=17.24;ReadPosRankSum=1.628;VQSLOD=3.0652;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:26.71:0,27,340	0/0:6,0:6:5.98:0,6,58	0/0:33,0:18:35.77:0,36,382	0/0:36,0:24:12.13:0,12,274	0/0:30,0:30:57.01:0,57,691	0/0:26,0:27:63.02:0,63,757	0/0:28,0:27:59.50:0,60,692	0/0:37,0:36:59.78:0,60,729	0/0:31,0:31:38.96:0,39,929	0/0:42,0:41:87.26:0,87,1084	0/0:18,0:17:29.29:0,29,335	0/0:28,0:28:71.93:0,72,882	0/0:16,0:17:47.98:0,48,582	0/0:24,0:24:66.20:0,66,819	0/1:26,20:45:99:507,0,278	0/1:15,20:35:26.53:900,0,27	0/0:1,0:24:66.89:0,67,326	0/1:11,8:18:99:453,0,142	0/0:24,0:19:36.10:0,36,440	0/0:20,0:20:33.10:0,33,416	0/0:117,0:116:99:0,232,2892	0/0:19,0:17:42.13:0,42,530	0/0:17,0:16:18.05:0,18,227	0/0:39,0:39:87.28:0,87,1103	0/1:10,9:19:39.89:462,0,40	0/1:39,9:47:99:487,0,791	0/1:15,9:23:99:409,0,112	0/1:6,10:15:99:350,0,185
chr10	5193041	.	TAC	T	709.67	PASS	AB=0.959;AC=9;AF=0.161;AN=56;BaseQRankSum=8.140;DP=942;FS=20.618;HRun=0;HaplotypeScore=211.1613;InbreedingCoeff=0.0077;MQ=53.47;MQ0=20;MQRankSum=-0.998;QD=2.64;ReadPosRankSum=0.215;VQSLOD=1.1769;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:39.12:0,39,568	0/0:7,0:7:12.03:0,12,175	0/0:45,0:14:17.46:0,17,204	0/0:50,0:17:20.61:0,21,261	0/0:34,0:33:64.62:0,65,1007	0/0:27,0:27:66.21:0,66,1051	0/0:25,0:24:63.20:0,63,1011	0/0:37,0:25:24.51:0,25,308	0/0:33,0:33:91.67:0,92,1371	0/0:45,0:42:99:0,102,1443	0/0:23,0:22:54.18:0,54,897	0/0:37,0:35:82.21:0,82,1418	0/0:16,0:16:36.07:0,36,541	0/0:29,0:29:81.25:0,81,1296	0/1:52,1:52:19.30:19,0,36	1/1:41,4:45:2.61:306,3,0	0/1:33,0:33:43.09:43,0,49	0/1:19,0:18:38:55,0,38	0/0:22,0:15:16.27:0,16,200	0/0:26,0:23:52.66:0,53,784	0/0:112,0:109:99:0,244,3945	0/0:20,0:19:51.17:0,51,846	0/0:15,0:13:27.09:0,27,445	0/0:40,0:40:99:0,105,1630	0/1:22,3:25:21.94:62,0,22	0/1:47,3:50:32.54:265,0,33	0/1:22,3:23:90.52:91,0,190	0/1:19,0:18:2.08:2,0,46
chr10	5193059	.	T	TAC	2507.17	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=15.606;DP=947;FS=16.364;HRun=0;HaplotypeScore=198.8726;InbreedingCoeff=0.8512;MQ=50.60;MQ0=33;MQRankSum=2.595;QD=8.80;ReadPosRankSum=-0.489;VQSLOD=2.2570;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,15:34:50.11:592,50,0	0/0:7,0:6:12.04:0,12,151	0/0:48,0:8:2.52:0,3,64	0/0:51,0:10:3.31:0,3,125	0/0:32,0:30:66.04:0,66,800	0/0:26,0:26:66.19:0,66,809	0/0:29,0:28:63.15:0,63,748	0/0:34,0:26:43.63:0,44,250	0/0:32,0:33:84.65:0,85,953	0/0:47,0:41:84.25:0,84,1028	0/0:31,0:28:57.18:0,57,717	0/0:38,0:37:83.88:0,84,979	0/0:13,0:13:36.09:0,36,435	0/0:30,0:29:81.08:0,81,982	1/1:50,0:49:66.50:437,66,0	1/1:40,1:41:37.80:282,38,0	1/1:35,0:35:68.86:436,69,0	1/1:16,0:16:14.19:113,14,0	0/0:24,0:11:18.01:0,18,212	0/0:23,0:21:45.13:0,45,550	0/0:106,0:105:99:0,240,2941	0/0:23,0:21:47.93:0,48,566	0/0:21,0:19:27.06:0,27,323	0/0:38,0:38:85.52:0,86,1077	1/1:25,0:24:28.76:204,29,0	1/1:38,1:39:28.33:310,28,0	0/1:24,0:23:78.39:109,0,78	1/1:20,0:19:20.51:229,21,0
chr10	5193080	.	T	TAC	484.69	PASS	AB=0.877;AC=3;AF=0.054;AN=56;BaseQRankSum=7.107;DP=917;FS=0.000;HRun=0;HaplotypeScore=194.5018;InbreedingCoeff=-0.0546;MQ=50.69;MQ0=32;MQRankSum=-3.197;QD=4.80;ReadPosRankSum=-1.534;VQSLOD=2.4490;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:16,17:33:14.72:499,0,15	0/0:8,0:8:14.88:0,15,161	0/0:52,0:7:17.69:0,18,177	0/0:42,0:12:23.99:0,24,274	0/0:33,0:31:56.97:0,57,686	0/0:24,0:24:54.15:0,54,650	0/0:21,0:21:42.04:0,42,503	0/0:44,0:35:72.95:0,73,901	0/0:34,0:34:75.68:0,76,901	0/0:39,0:34:84.07:0,84,989	0/0:33,0:28:45.01:0,45,531	0/0:35,0:35:84.20:0,84,1004	0/0:14,0:14:33.10:0,33,406	0/0:34,0:34:87.10:0,87,1045	0/0:50,0:49:3.84:0,4,775	0/1:32,1:33:53.03:53,0,706	0/0:36,0:36:92.98:0,93,1091	0/0:15,0:15:10.33:0,10,177	0/0:23,0:12:15.05:0,15,184	0/0:24,0:21:42.12:0,42,505	0/0:97,0:97:99:0,209,2443	0/0:19,0:17:24.06:0,24,282	0/0:25,0:23:39.11:0,39,468	0/0:37,0:37:68.85:0,69,1050	0/0:24,0:22:39.12:0,39,479	0/1:35,0:34:32.59:33,0,610	0/0:25,0:25:3.39:0,3,555	0/0:24,0:23:30.77:0,31,563
chr10	5193366	.	GT	G	1248.73	PASS	AB=0.766;AC=17;AF=0.304;AN=56;BaseQRankSum=0.987;DP=602;FS=5.062;HRun=16;HaplotypeScore=78.6667;InbreedingCoeff=0.0807;MQ=71.33;MQ0=4;MQRankSum=1.564;QD=4.08;ReadPosRankSum=2.871;VQSLOD=1.2034;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:29,13:46:56.72:243,0,57	0/1:4,1:7:3.35:3,0,62	0/1:42,0:15:2.29:2,0,29	0/0:33,1:15:11.67:0,12,67	0/0:26,1:29:16.70:0,17,317	0/1:14,1:19:26.26:26,0,184	0/0:20,2:22:1.52:0,2,217	0/1:12,15:27:18.96:160,0,19	0/0:23,0:24:56.69:0,57,447	0/0:22,1:23:10.78:0,11,244	0/0:15,0:17:15.66:0,16,142	0/0:16,0:16:30.58:0,31,225	0/0:1,0:4:5.84:0,6,39	0/0:11,0:11:5.92:0,6,145	1/1:14,4:19:0.35:106,0,0	0/1:8,9:17:18.42:99,0,18	0/1:13,17:29:21.68:216,0,22	0/1:13,3:19:46.89:115,0,47	0/0:22,1:24:12.21:0,12,194	0/0:19,3:23:14.44:0,14,312	0/0:12,0:12:14.86:0,15,141	0/0:17,1:19:5.61:0,6,135	0/0:11,1:14:8.57:0,9,143	0/0:23,0:24:12.13:0,12,347	1/1:9,11:20:1.11:103,1,0	1/1:17,11:28:12.96:189,13,0	0/1:10,11:22:23.08:71,0,23	1/1:2,8:10:11.75:72,12,0
chr10	5194056	.	T	TATAA	3524.91	PASS	AB=0.917;AC=12;AF=0.222;AN=54;BaseQRankSum=8.016;DP=406;FS=2.597;HRun=0;HaplotypeScore=88.1463;InbreedingCoeff=0.7260;MQ=60.33;MQ0=0;MQRankSum=-8.621;QD=34.90;ReadPosRankSum=1.228;VQSLOD=3.4521;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:47.35:0,47,710	0/0:8,0:8:21.07:0,21,356	0/0:9,0:9:20.98:0,21,293	0/0:9,0:7:9.03:0,9,153	0/0:12,0:12:24.08:0,24,404	0/0:10,0:10:27.06:0,27,405	0/0:26,0:26:57.15:0,57,882	0/0:34,0:34:87.29:0,87,1391	0/0:12,0:12:30.07:0,30,456	0/0:22,0:22:57.19:0,57,966	0/0:5,0:5:6.02:0,6,102	0/0:19,0:19:42.14:0,42,713	0/0:8,0:8:18.06:0,18,305	0/0:12,0:12:30.10:0,30,508	1/1:11,0:10:9.03:175,9,0	0/1:13,1:14:20.85:485,0,21	0/0:27,0:27:75.26:0,75,1228	1/1:17,1:16:30.10:678,30,0	0/0:20,0:20:36.11:0,36,584	./.	0/0:13,0:13:21.06:0,21,330	0/0:9,0:9:12.03:0,12,179	0/0:9,0:9:18.06:0,18,305	0/0:16,0:16:33.11:0,33,560	1/1:7,2:9:15.05:346,15,0	0/1:16,2:18:62.56:614,0,63	1/1:20,1:21:42.11:873,42,0	1/1:10,0:10:15.05:354,15,0
chr10	5194070	.	T	TAA	2765.52	PASS	AB=0.659;AC=12;AF=0.214;AN=56;BaseQRankSum=9.134;DP=388;FS=3.199;HRun=3;HaplotypeScore=78.7445;InbreedingCoeff=0.7093;MQ=58.77;MQ0=3;MQRankSum=-7.864;QD=34.14;ReadPosRankSum=2.387;VQSLOD=3.5109;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:48.13:0,48,589	0/0:8,0:8:21.07:0,21,320	0/0:19,0:14:26.86:0,27,373	0/0:18,0:10:17.78:0,18,172	0/0:11,0:11:27.07:0,27,390	0/0:11,0:11:30.07:0,30,416	0/0:27,0:27:78.08:0,78,1129	0/0:33,0:33:96.26:0,96,1273	0/0:10,0:10:30.07:0,30,416	0/0:21,0:21:63.21:0,63,964	0/0:2,0:2:6.02:0,6,92	0/0:20,0:20:57.19:0,57,864	0/0:7,0:7:21.06:0,21,300	0/0:14,0:14:42.07:0,42,604	1/1:3,3:5:8.16:204,8,0	0/1:6,6:12:27.43:314,0,27	0/0:32,0:32:90.57:0,91,981	1/1:6,11:15:36.06:616,36,0	0/0:17,0:18:49.78:0,50,752	0/0:1,0:1:3.01:0,3,46	0/0:9,0:9:27.08:0,27,392	0/0:4,0:4:12.03:0,12,164	0/0:8,0:8:21.07:0,21,319	0/0:15,0:15:42.12:0,42,614	1/1:3,4:7:15.05:241,15,0	0/1:7,8:15:38.59:567,0,39	1/1:6,12:18:44.14:678,44,0	1/1:1,5:6:18.06:321,18,0
chr10	5194076	.	TC	T	875.90	PASS	AB=0.750;AC=15;AF=0.278;AN=54;BaseQRankSum=12.698;DP=375;FS=8.952;HRun=1;HaplotypeScore=75.2068;InbreedingCoeff=0.8459;MQ=61.56;MQ0=4;MQRankSum=-7.201;QD=8.67;ReadPosRankSum=3.613;VQSLOD=0.7313;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/0:7,0:7:18.53:0,19,262	0/0:21,0:13:24.81:0,25,346	0/0:22,0:11:20.14:0,20,194	0/0:10,0:10:27.02:0,27,370	0/0:12,0:12:30.08:0,30,437	0/0:34,0:34:86.74:0,87,1241	0/0:33,0:33:92.96:0,93,1047	0/0:9,0:9:27.07:0,27,374	0/0:22,0:22:66.21:0,66,947	0/0:3,0:3:6.02:0,6,92	0/0:20,0:20:56.03:0,56,839	0/0:8,0:7:21.07:0,21,307	0/0:15,0:15:42.10:0,42,583	1/1:5,1:4:9.71:34,10,0	0/1:8,4:12:4.58:103,0,5	1/1:9,22:31:56.46:500,56,0	1/1:12,3:13:26.82:135,27,0	0/0:22,0:22:65.82:0,66,838	0/0:1,0:1:3.01:0,3,46	0/0:8,0:8:24.08:0,24,353	0/0:3,0:3:9.03:0,9,138	0/0:7,0:7:18.06:0,18,246	0/0:17,0:17:45.11:0,45,636	1/1:5,0:5:11.92:55,12,0	1/1:10,0:10:14.90:81,15,0	1/1:13,3:17:25.58:122,26,0	1/1:5,0:5:10.76:35,11,0
chr10	5194078	.	TC	T	754.60	PASS	AB=0.888;AC=13;AF=0.241;AN=54;BaseQRankSum=12.573;DP=376;FS=8.924;HRun=1;HaplotypeScore=75.7108;InbreedingCoeff=0.5972;MQ=61.40;MQ0=4;MQRankSum=-6.056;QD=7.19;ReadPosRankSum=3.588;VQSLOD=0.4976;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/0:7,0:7:21.04:0,21,299	0/0:20,0:12:13.57:0,14,294	0/0:22,0:11:17.86:0,18,242	0/0:10,0:10:27.09:0,27,414	0/0:12,0:12:33.11:0,33,517	0/0:35,0:35:91.19:0,91,1417	0/0:30,0:30:84.28:0,84,1236	0/0:10,0:10:27.09:0,27,419	0/0:22,0:22:66.22:0,66,1014	0/0:3,0:3:6.02:0,6,96	0/0:20,0:20:60.18:0,60,923	0/0:9,0:8:24.08:0,24,363	0/0:13,0:13:36.12:0,36,575	1/1:5,1:4:9.26:32,9,0	0/1:10,3:13:17.67:92,0,18	1/1:9,22:31:40.47:481,40,0	1/1:14,3:15:2.68:119,3,0	0/0:23,0:23:69.22:0,69,1040	0/0:1,0:1:3.01:0,3,48	0/0:7,0:7:21.07:0,21,336	0/0:3,0:3:9.03:0,9,144	0/0:7,0:7:18.06:0,18,268	0/0:17,0:17:45.15:0,45,700	1/1:5,0:5:8.70:23,9,0	0/1:11,0:11:3.26:59,0,3	0/1:14,3:17:17.54:85,0,18	1/1:5,0:5:9.59:30,10,0
chr10	5195858	.	G	GA	735.29	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-6.583;DP=580;FS=15.675;HRun=6;HaplotypeScore=63.4170;InbreedingCoeff=0.9716;MQ=83.44;MQ0=0;MQRankSum=-0.079;QD=30.64;ReadPosRankSum=0.085;VQSLOD=2.4734;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,120,1208	0/0:12,0:12:36.08:0,36,367	0/0:13,0:13:15:0,15,143	0/0:22,0:22:42.93:0,43,407	0/0:24,0:24:56.79:0,57,561	0/0:22,0:22:63.11:0,63,629	0/0:20,0:20:51.05:0,51,502	0/0:38,0:38:99:0,99,1010	0/0:23,0:23:63.13:0,63,636	0/0:22,0:22:51.09:0,51,511	0/0:11,0:11:29.66:0,30,285	0/0:26,0:26:75.16:0,75,760	0/0:19,0:19:54.12:0,54,551	0/0:10,0:10:24.05:0,24,245	0/0:30,0:30:75.13:0,75,756	0/0:16,0:16:45.09:0,45,452	1/1:0,24:24:66.21:830,66,0	0/0:26,0:26:75.17:0,75,765	0/0:14,0:14:39.07:0,39,386	0/0:23,0:23:63.13:0,63,636	0/0:32,0:32:87.19:0,87,887	0/0:19,0:19:51.10:0,51,514	0/0:8,0:8:18.04:0,18,184	0/0:12,0:12:33.07:0,33,337	0/0:14,0:14:35.99:0,36,351	0/0:21,0:21:54.12:0,54,551	0/0:25,0:25:60.11:0,60,605	0/0:8,0:8:24.05:0,24,245
chr10	5197095	.	TA	T	9688.92	PASS	AB=0.531;AC=19;AF=0.339;AN=56;BaseQRankSum=12.935;DP=713;FS=2.795;HRun=2;HaplotypeScore=69.9019;InbreedingCoeff=0.9155;MQ=89.69;MQ0=0;MQRankSum=-1.306;QD=34.00;ReadPosRankSum=3.258;VQSLOD=5.2000;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:0,58:58:99:2023,157,0	0/0:22,0:22:66.20:0,66,965	0/0:27,0:27:72.15:0,72,981	0/0:25,0:25:62.53:0,63,864	0/0:29,0:29:87.26:0,87,1242	0/0:22,0:22:63.20:0,63,924	0/0:27,0:27:78.24:0,78,1129	1/1:2,28:30:84.23:1046,84,0	0/0:25,0:25:75.24:0,75,1102	0/0:22,0:22:66.22:0,66,966	0/0:20,0:20:60.16:0,60,817	0/0:23,0:23:69.22:0,69,1009	0/0:20,0:20:60.14:0,60,870	0/0:24,0:24:72.24:0,72,1074	1/1:0,30:30:75.24:973,75,0	1/1:1,36:37:93.30:1207,93,0	1/1:0,38:38:99:1362,105,0	1/1:0,21:21:57.19:738,57,0	0/0:18,0:18:54.18:0,54,807	0/0:26,0:26:78.25:0,78,1145	0/0:18,0:18:54.18:0,54,802	0/0:19,0:19:57.16:0,57,803	0/0:23,0:23:69.22:0,69,1004	0/0:38,0:38:99:0,114,1648	1/1:1,21:22:54.18:700,54,0	0/1:3,23:26:56.65:787,0,57	1/1:0,19:19:54.17:696,54,0	1/1:0,4:4:12.04:156,12,0
chr10	5197635	.	A	ATACATGCAG	15042.56	PASS	AB=0.522;AC=13;AF=0.232;AN=56;BaseQRankSum=-10.393;DP=674;FS=0.000;HRun=0;HaplotypeScore=165.1867;InbreedingCoeff=0.8838;MQ=82.32;MQ0=0;MQRankSum=-12.852;QD=80.87;ReadPosRankSum=-0.809;VQSLOD=4.7378;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,108,2775	0/0:4,0:4:8.85:0,9,110	0/0:21,0:21:46.78:0,47,1475	0/0:24,0:24:64.99:0,65,1700	0/0:18,0:18:54.12:0,54,1385	0/0:29,0:29:84.27:0,84,2376	0/0:25,0:25:66.18:0,66,1697	1/1:4,35:48:99:4491,144,0	0/0:31,0:31:84.27:0,84,2398	0/0:20,0:20:60.21:0,60,1785	0/0:18,0:18:51.15:0,51,1340	0/0:23,0:23:66.22:0,66,1862	0/0:25,0:25:72.23:0,72,1955	0/0:24,0:24:61.71:0,62,1775	1/1:0,29:32:48.16:2325,48,0	0/0:21,0:21:57.20:0,57,1636	0/0:32,0:32:87.30:0,87,2476	1/1:2,7:12:18.03:748,18,0	0/0:24,0:24:69.24:0,69,2026	0/0:15,0:15:36.12:0,36,979	0/0:37,0:37:93.32:0,93,2682	0/0:13,0:13:36.11:0,36,968	0/0:15,0:15:33.11:0,33,980	0/0:29,0:29:87.28:0,87,2409	1/1:1,14:19:27.09:1304,27,0	0/1:3,27:35:99:3126,0,179	1/1:0,25:29:48.16:2320,48,0	1/1:0,10:10:15.05:728,15,0
chr10	5197939	.	CTT	C	1248.30	PASS	AB=0.928;AC=16;AF=0.286;AN=56;BaseQRankSum=8.305;DP=486;FS=0.467;HRun=15;HaplotypeScore=70.4046;InbreedingCoeff=0.7466;MQ=68.43;MQ0=2;MQRankSum=-2.239;QD=8.27;ReadPosRankSum=3.698;VQSLOD=0.8634;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,1:43:89.28:0,89,1298	0/1:8,1:9:5.87:6,0,176	0/1:21,1:17:11.80:12,0,207	0/0:12,0:9:6.42:0,6,60	0/0:13,1:16:41.10:0,41,488	0/0:19,0:22:50.57:0,51,579	0/0:19,0:19:42.12:0,42,541	1/1:7,14:22:29.51:352,30,0	0/0:13,0:13:30.10:0,30,396	0/0:24,0:24:51.13:0,51,643	0/0:17,0:17:41.55:0,42,457	0/0:8,0:8:21.04:0,21,255	0/0:9,0:9:21:0,21,243	0/0:8,0:8:18.03:0,18,211	1/1:2,1:21:38.63:179,39,0	0/0:10,0:10:21.07:0,21,284	0/0:23,0:26:62.06:0,62,718	1/1:3,2:15:25.15:135,25,0	0/0:24,0:24:56.73:0,57,691	0/0:10,1:12:0.64:0,1,287	0/0:26,0:28:71.56:0,72,782	0/0:11,0:13:29.07:0,29,342	0/0:11,0:14:29.04:0,29,305	0/0:15,0:16:42.08:0,42,518	1/1:3,0:12:21.91:94,22,0	1/1:6,14:20:11.24:251,11,0	1/1:3,9:12:2.61:187,3,0	1/1:6,9:17:14.62:220,15,0
chr10	5198226	.	G	GA	1680.86	PASS	AB=0.614;AC=11;AF=0.196;AN=56;BaseQRankSum=1.674;DP=657;FS=3.877;HRun=10;HaplotypeScore=73.8088;InbreedingCoeff=0.8651;MQ=76.18;MQ0=0;MQRankSum=-1.745;QD=12.54;ReadPosRankSum=-0.788;VQSLOD=3.4512;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:62,0:62:99:0,171,1404	0/0:6,0:6:14.98:0,15,123	0/0:10,0:11:16.88:0,17,119	0/0:18,0:17:32.05:0,32,249	0/0:17,0:18:46.97:0,47,375	0/0:23,0:22:65.92:0,66,542	0/0:24,0:24:68.92:0,69,567	0/0:48,1:49:77.82:0,78,836	0/0:25,0:25:62.91:0,63,517	0/0:27,0:27:71.90:0,72,589	0/0:22,0:21:47.92:0,48,394	0/0:20,0:21:58.97:0,59,474	0/0:21,0:22:46.96:0,47,375	0/0:24,0:24:50.90:0,51,416	1/1:7,0:30:56.93:290,57,0	0/0:1,0:14:24.44:0,24,71	0/0:17,0:17:41.90:0,42,340	1/1:2,0:28:51.17:256,51,0	0/0:16,0:16:44.92:0,45,366	0/0:19,0:19:47.93:0,48,394	0/0:32,0:32:80.84:0,81,661	0/0:20,0:20:44.04:0,44,368	0/0:21,0:21:47.92:0,48,394	0/0:31,0:32:79.93:0,80,646	1/1:4,2:20:15.68:83,16,0	0/1:10,16:27:21.69:373,0,22	1/1:1,24:25:72.16:757,72,0	1/1:0,4:4:9.02:96,9,0
chr10	5198699	.	G	GAGAGAC	2548.09	PASS	AB=0.591;AC=5;AF=0.089;AN=56;BaseQRankSum=-6.229;DP=730;FS=15.795;HRun=0;HaplotypeScore=163.1031;InbreedingCoeff=0.8017;MQ=78.53;MQ0=1;MQRankSum=-7.148;QD=49.96;ReadPosRankSum=-0.325;VQSLOD=2.8767;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,105,2170	0/0:3,0:3:9.03:0,9,194	0/0:38,0:35:56.09:0,56,1071	0/0:62,0:53:53:0,53,979	0/0:26,0:26:48.15:0,48,994	0/0:22,0:22:45.02:0,45,969	0/0:35,0:35:72.25:0,72,1520	0/0:39,0:39:69.24:0,69,1441	0/0:23,0:23:57.20:0,57,1226	0/0:23,0:23:51.17:0,51,1097	0/0:15,0:15:24.08:0,24,501	0/0:26,0:26:66.23:0,66,1422	0/0:25,0:25:60.21:0,60,1274	0/0:22,0:22:42.11:0,42,861	0/0:28,0:28:57.20:0,57,1197	0/0:13,0:13:36.12:0,36,753	0/0:36,0:36:81.26:0,81,1647	0/0:34,0:34:63.19:0,63,1299	0/0:25,0:25:57.20:0,57,1198	0/0:13,0:13:27.09:0,27,581	0/0:34,0:34:90.27:0,90,1881	0/0:25,0:25:63.22:0,63,1342	0/0:16,0:16:39.13:0,39,824	0/0:40,0:40:93.30:0,93,1912	0/0:15,0:15:36.12:0,36,710	0/1:8,17:26:4.43:1767,0,4	1/1:8,10:18:14.07:501,14,0	1/1:3,4:7:12.04:402,12,0
chr10	5199702	.	A	AG	168.90	PASS	AC=2;AF=0.038;AN=52;BaseQRankSum=4.148;DP=485;FS=14.657;HRun=2;HaplotypeScore=48.2765;InbreedingCoeff=0.7135;MQ=47.87;MQ0=57;MQRankSum=-4.023;QD=24.13;ReadPosRankSum=-1.100;VQSLOD=1.8134;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:21:38.26:0,38,265	0/0:8,0:7:20.98:0,21,225	./.	./.	0/0:25,0:25:63.10:0,63,748	0/0:29,0:27:72.23:0,72,892	0/0:26,1:21:54.10:0,54,650	0/0:9,0:7:21.07:0,21,259	0/0:21,0:21:54.17:0,54,669	0/0:17,0:16:48.15:0,48,595	0/0:17,0:16:38.87:0,39,440	0/0:28,0:28:75.24:0,75,929	0/0:17,0:17:45.12:0,45,535	0/0:27,0:27:68.73:0,69,840	0/0:9,0:8:15.03:0,15,173	0/0:4,0:3:6.01:0,6,64	1/1:1,6:6:18.06:259,18,0	0/0:6,0:5:3.01:0,3,37	0/0:14,0:8:21.07:0,21,260	0/0:20,0:19:54.13:0,54,651	0/0:26,0:22:57.18:0,57,705	0/0:14,0:14:36.11:0,36,437	0/0:12,0:12:30.01:0,30,351	0/0:8,0:7:18.06:0,18,223	0/0:9,0:7:8.98:0,9,84	0/0:22,0:20:57.18:0,57,707	0/0:18,0:17:42.08:0,42,480	0/0:9,0:9:27.08:0,27,335
chr10	5202565	.	TC	T	1338.69	PASS	AB=1.000;AC=8;AF=0.143;AN=56;BaseQRankSum=6.875;DP=541;FS=0.000;HRun=10;HaplotypeScore=66.1841;InbreedingCoeff=0.7049;MQ=75.73;MQ0=2;MQRankSum=-1.133;QD=10.80;ReadPosRankSum=2.710;VQSLOD=2.8035;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:40.33:0,40,632	0/0:12,0:12:24.05:0,24,264	0/0:29,0:18:22.63:0,23,199	0/1:31,0:22:12.53:13,0,94	0/0:18,1:19:15.70:0,16,424	0/0:17,0:17:27.67:0,28,400	0/0:22,0:22:54.06:0,54,551	0/0:9,0:23:37.74:0,38,222	0/0:18,0:18:25.70:0,26,407	0/0:9,1:10:0.88:0,1,221	0/0:19,0:19:45.10:0,45,480	0/0:19,0:19:45:0,45,487	0/0:15,0:15:41.98:0,42,445	0/0:4,0:8:11.52:0,12,67	1/1:3,24:28:58.95:500,59,0	0/0:24,0:24:60.10:0,60,622	0/1:20,0:20:0.73:41,0,1	1/1:2,20:22:53.99:468,54,0	0/0:19,0:18:32.91:0,33,325	0/0:15,0:15:39.06:0,39,404	0/0:23,1:24:30.89:0,31,488	0/0:18,1:19:13.03:0,13,322	0/0:13,2:15:6.97:0,7,279	0/0:20,0:20:42.10:0,42,456	1/1:1,22:23:53.99:468,54,0	0/0:15,0:15:36.06:0,36,378	0/0:18,0:18:42.11:0,42,464	0/0:9,0:9:24.06:0,24,265
chr10	5202575	.	CA	C	299.92	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=7.274;DP=620;FS=3.132;HRun=8;HaplotypeScore=74.8961;InbreedingCoeff=0.7417;MQ=75.57;MQ0=2;MQRankSum=1.017;QD=7.32;ReadPosRankSum=4.037;VQSLOD=0.7488;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:84.01:0,84,861	0/0:15,0:15:42.06:0,42,438	0/0:31,0:20:41.16:0,41,331	0/0:32,0:21:17.04:0,17,206	0/0:30,0:30:71.51:0,72,734	0/0:20,0:20:39.08:0,39,422	0/0:24,0:24:60.11:0,60,646	0/0:24,0:24:48.31:0,48,396	0/0:20,0:20:42.56:0,43,458	0/0:21,0:21:58.65:0,59,584	0/0:22,0:22:63.07:0,63,654	0/0:19,0:19:51.10:0,51,561	0/0:17,0:17:45.10:0,45,508	0/0:12,0:11:23.96:0,24,196	0/0:32,0:32:15.80:0,16,185	0/0:23,0:23:54.13:0,54,610	1/1:2,18:20:42.02:394,42,0	0/1:21,0:21:1.75:2,0,21	0/0:19,0:18:37.07:0,37,433	0/0:29,0:29:75.05:0,75,741	0/0:19,0:19:38.51:0,39,438	0/0:19,0:19:31.55:0,32,395	0/0:17,0:17:38.45:0,38,398	0/0:21,0:21:54.09:0,54,571	0/0:28,0:28:21.10:0,21,136	0/0:23,0:23:60.08:0,60,618	0/0:20,0:20:60.12:0,60,651	0/0:10,0:10:30.06:0,30,333
chr10	5204857	.	TA	T	6524.32	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=11.476;DP=525;FS=1.126;HRun=2;HaplotypeScore=56.5293;InbreedingCoeff=0.9841;MQ=87.39;MQ0=0;MQRankSum=-2.506;QD=35.46;ReadPosRankSum=1.606;VQSLOD=5.1818;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,41:41:99:1480,114,0	0/0:9,0:9:27.09:0,27,400	0/0:21,0:21:57.07:0,57,770	0/0:21,0:21:57.19:0,57,831	0/0:6,0:6:15.05:0,15,225	0/0:14,0:14:39.11:0,39,563	0/0:36,0:36:99:0,108,1617	1/1:3,19:22:51.12:643,51,0	0/0:12,0:12:36.12:0,36,527	0/0:28,0:28:84.28:0,84,1236	0/0:8,0:8:18.06:0,18,270	0/0:19,0:19:57.19:0,57,854	0/0:13,0:13:39.13:0,39,584	0/0:20,0:20:60.19:0,60,872	1/1:0,34:34:99:1285,99,0	1/1:0,16:16:39.13:506,39,0	1/1:0,36:36:99:1285,99,0	1/1:0,26:26:75.24:974,75,0	0/0:19,0:19:54.16:0,54,771	0/0:12,0:12:30.08:0,30,425	0/0:23,0:23:69.23:0,69,1034	0/0:10,0:10:27.09:0,27,405	0/0:5,0:5:9.03:0,9,135	0/0:22,0:22:66.22:0,66,989	1/1:0,9:9:27.09:351,27,0	0/0:15,0:15:42.14:0,42,612	0/0:20,0:20:60.20:0,60,897	0/0:8,0:8:24.08:0,24,360
chr10	5205000	.	TA	T	988.01	PASS	AB=0.948;AC=10;AF=0.179;AN=56;BaseQRankSum=6.167;DP=508;FS=4.990;HRun=10;HaplotypeScore=61.8471;InbreedingCoeff=0.5543;MQ=79.73;MQ0=0;MQRankSum=0.080;QD=7.54;ReadPosRankSum=1.747;VQSLOD=1.7685;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:41,1:42:79.16:0,79,1065	0/1:7,1:8:5.01:5,0,170	0/1:28,0:27:5.50:6,0,427	0/1:14,0:11:6.56:7,0,53	0/0:19,0:19:51.09:0,51,537	0/0:17,0:17:44.97:0,45,461	0/0:22,0:22:54.11:0,54,573	0/0:25,0:25:63.11:0,63,670	0/0:14,0:14:36.08:0,36,388	0/0:26,0:26:72.19:0,72,790	0/0:14,0:14:30.08:0,30,332	0/0:18,2:20:5.08:0,5,512	0/0:14,0:14:18.68:0,19,322	0/1:17,2:19:0.93:1,0,438	1/1:1,18:19:47.99:417,48,0	0/0:1,0:12:25.65:0,26,146	0/0:3,0:19:34.87:0,35,174	1/1:5,15:20:35.98:313,36,0	0/0:19,1:21:30.92:0,31,543	0/0:13,0:13:10.02:0,10,314	0/0:11,1:12:5.27:0,5,276	0/0:15,0:15:39.10:0,39,424	0/0:14,0:15:35.92:0,36,372	0/0:20,0:20:57.13:0,57,614	1/1:5,17:22:44.97:390,45,0	0/0:17,1:18:25.06:0,25,490	0/0:13,0:13:33.06:0,33,348	0/0:5,0:5:15.02:0,15,156
chr10	5207820	.	AGGG	A	655.52	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.826;DP=712;FS=0.000;HRun=4;HaplotypeScore=104.5995;InbreedingCoeff=0.9938;MQ=84.01;MQ0=0;MQRankSum=-5.958;QD=36.42;ReadPosRankSum=-0.482;VQSLOD=1.4903;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,157,3622	0/0:8,0:8:24.06:0,24,519	0/0:19,0:19:57.11:0,57,1248	0/0:25,0:25:37.47:0,37,1322	0/0:23,0:23:63.21:0,63,1413	0/0:19,0:18:54.19:0,54,1257	0/0:31,0:31:93.32:0,93,2170	0/0:21,0:21:63.22:0,63,1462	0/0:26,0:26:78.26:0,78,1801	0/0:23,0:23:69.24:0,69,1610	0/0:18,0:18:54.19:0,54,1273	0/0:38,0:38:99:0,111,2538	0/0:17,0:17:51.18:0,51,1206	0/0:37,0:37:99:0,108,2455	0/0:32,0:32:96.33:0,96,2271	0/0:33,0:33:99:0,99,2246	1/1:0,18:18:45.15:750,45,0	0/0:23,0:23:66.20:0,66,1470	0/0:20,0:20:54.18:0,54,1246	0/0:19,0:19:54.19:0,54,1274	0/0:53,0:53:99:0,157,3590	0/0:25,0:25:69.23:0,69,1629	0/0:15,0:15:42.14:0,42,946	0/0:29,0:29:87.30:0,87,2058	0/0:26,0:26:77.85:0,78,1780	0/0:24,0:24:72.24:0,72,1638	0/0:31,0:31:93.29:0,93,2148	0/0:7,0:7:21.07:0,21,497
chr10	5208695	.	GA	G	1988.14	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.358;DP=564;FS=11.407;HRun=3;HaplotypeScore=59.3861;InbreedingCoeff=0.9855;MQ=79.54;MQ0=0;MQRankSum=-1.565;QD=30.12;ReadPosRankSum=2.988;VQSLOD=2.5757;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,36:37:87.27:1073,87,0	0/0:8,0:8:21.04:0,21,258	0/0:19,0:18:24.40:0,24,430	0/0:18,0:18:33.69:0,34,479	0/0:16,0:16:45.14:0,45,609	0/0:9,0:9:27.09:0,27,377	0/0:19,0:19:57.18:0,57,778	0/0:11,0:11:30.07:0,30,399	0/0:18,0:18:54.13:0,54,688	0/0:23,0:23:65.74:0,66,795	0/0:14,0:14:42.08:0,42,536	0/0:29,0:29:87.24:0,87,1138	0/0:23,0:23:63.20:0,63,861	0/0:20,0:20:60.16:0,60,783	0/0:31,0:31:87.21:0,87,1089	0/0:22,0:22:66.18:0,66,895	1/1:0,29:29:84.26:1037,84,0	0/0:23,0:23:66.17:0,66,868	0/0:24,0:24:69.18:0,69,874	0/0:5,0:5:15.04:0,15,194	0/0:48,0:48:99:0,135,1816	0/0:19,0:19:56.22:0,56,749	0/0:11,0:11:30.01:0,30,358	0/0:21,0:21:63.19:0,63,847	0/0:19,0:19:57.13:0,57,702	0/0:28,0:28:78.25:0,78,1072	0/0:13,0:13:33.05:0,33,422	0/0:7,0:7:21.07:0,21,290
chr10	5210984	.	AC	A	611.74	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.576;DP=748;FS=0.000;HRun=3;HaplotypeScore=76.5718;InbreedingCoeff=0.9999;MQ=70.30;MQ0=1;MQRankSum=-0.582;QD=29.13;ReadPosRankSum=1.974;VQSLOD=3.0480;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,132,1844	0/0:14,0:14:40.35:0,40,526	0/0:24,0:24:69.23:0,69,973	0/0:33,0:33:97.17:0,97,1340	0/0:28,0:28:72.24:0,72,1036	0/0:23,0:23:69.21:0,69,945	0/0:25,0:25:75.23:0,75,1033	0/0:31,0:31:90.25:0,90,1197	0/0:21,0:21:63.21:0,63,907	0/0:31,0:31:93.31:0,93,1331	0/0:13,0:13:39.13:0,39,546	0/0:36,0:36:99:0,105,1469	0/0:38,0:38:99:0,108,1480	0/0:22,0:22:66.22:0,66,950	0/0:34,0:34:99:0,102,1469	0/0:31,0:31:90.29:0,90,1278	1/1:1,20:21:57.18:707,57,0	0/0:25,0:25:75.25:0,75,1078	0/0:26,0:26:72.23:0,72,1019	0/0:22,0:22:63.20:0,63,884	0/0:31,0:29:84.27:0,84,1190	0/0:27,0:27:78.24:0,78,1085	0/0:26,0:26:72.23:0,72,1014	0/0:18,0:18:54.18:0,54,769	0/0:23,0:23:60.19:0,60,847	0/0:32,0:32:93.30:0,93,1310	0/0:26,0:26:78.26:0,78,1122	0/0:20,0:20:57.19:0,57,820
chr10	5212866	.	A	AC	1957.41	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=4.122;DP=581;FS=24.368;HRun=8;HaplotypeScore=64.6564;InbreedingCoeff=0.9106;MQ=76.15;MQ0=1;MQRankSum=0.057;QD=13.14;ReadPosRankSum=0.871;VQSLOD=1.5133;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:80.45:0,80,709	0/0:4,0:4:8.98:0,9,76	0/0:19,0:17:25.28:0,25,253	0/1:24,0:23:2.41:2,0,156	0/0:25,0:25:66.01:0,66,594	0/0:21,0:21:53.74:0,54,468	0/0:25,0:25:69.03:0,69,631	1/1:10,9:19:27.05:295,27,0	0/0:16,0:16:45.02:0,45,411	0/0:17,0:17:45.02:0,45,410	0/0:27,0:27:69.02:0,69,625	0/0:19,0:19:45.02:0,45,411	0/0:25,0:25:66.01:0,66,598	0/0:16,0:16:39.01:0,39,356	1/1:1,0:22:45.73:246,46,0	1/1:2,15:17:42.09:471,42,0	1/1:5,31:36:47.77:803,48,0	1/1:2,2:22:43.08:261,43,0	0/0:22,0:22:56.99:0,57,511	0/0:19,0:19:45.01:0,45,411	0/0:19,0:19:54.02:0,54,490	0/0:22,0:22:63.03:0,63,575	0/0:16,0:16:39:0,39,352	0/0:39,0:39:99:0,111,1010	1/1:3,1:9:8.69:64,9,0	0/0:19,0:19:51.02:0,51,463	0/0:17,0:17:48.02:0,48,438	0/0:10,0:10:27.01:0,27,245
chr10	5213429	.	ACCAT	A	3462.74	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=12.204;DP=693;FS=0.496;HRun=0;HaplotypeScore=133.1349;InbreedingCoeff=0.9996;MQ=81.93;MQ0=0;MQRankSum=-12.241;QD=50.18;ReadPosRankSum=0.478;VQSLOD=4.4326;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,129,3503	0/0:9,0:9:27.09:0,27,678	0/0:17,0:17:47.62:0,48,1144	0/0:25,0:25:68.72:0,69,1757	0/0:27,0:27:78.27:0,78,2135	0/0:26,0:26:75.25:0,75,2007	0/0:34,0:34:99:0,102,2854	0/0:26,0:26:78.27:0,78,2145	0/0:21,0:21:63.20:0,63,1685	0/0:25,0:25:75.26:0,75,2096	0/0:12,0:12:36.12:0,36,959	0/0:38,0:38:99:0,114,3153	0/0:22,0:22:66.21:0,66,1725	0/0:33,0:33:96.33:0,96,2648	1/1:2,22:24:72.22:1365,72,0	0/0:27,0:27:81.28:0,81,2233	0/0:33,0:33:96.31:0,96,2611	1/1:0,19:19:45.15:897,45,0	0/0:20,0:20:60.14:0,60,1423	0/0:16,0:16:45.15:0,45,1189	0/0:28,0:28:84.29:0,84,2265	0/0:20,0:20:57.20:0,57,1582	0/0:18,0:18:51.17:0,51,1309	0/0:32,0:32:96.28:0,96,2400	1/1:0,26:26:63.17:1200,63,0	0/0:24,0:24:72.24:0,72,1957	0/0:29,0:29:84.29:0,84,2349	0/0:19,0:19:57.20:0,57,1483
chr10	5213439	.	CCTGCAG	C	3926.08	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=12.186;DP=701;FS=0.000;HRun=0;HaplotypeScore=162.3121;InbreedingCoeff=0.9994;MQ=79.84;MQ0=0;MQRankSum=-11.845;QD=62.32;ReadPosRankSum=2.206;VQSLOD=4.0688;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,129,4463	0/0:10,0:10:30.10:0,30,1083	0/0:18,0:18:27.41:0,27,1594	0/0:20,0:20:54.14:0,54,1654	0/0:26,0:26:72.25:0,72,2560	0/0:27,0:27:81.28:0,81,2862	0/0:36,0:36:99:0,108,3741	0/0:31,0:31:90.31:0,90,3134	0/0:21,0:21:63.22:0,63,2288	0/0:28,0:28:84.29:0,84,3065	0/0:12,0:12:36.12:0,36,1318	0/0:38,0:38:99:0,108,3785	0/0:25,0:25:75.26:0,75,2667	0/0:35,0:35:99:0,99,3334	1/1:0,22:22:66.23:1623,66,0	0/0:26,0:26:75.25:0,75,2664	0/0:34,0:34:99:0,99,3347	1/1:2,14:16:42.08:976,42,0	0/0:18,0:18:51.16:0,51,1695	0/0:14,0:14:39.11:0,39,1215	0/0:32,0:32:96.33:0,96,3475	0/0:22,0:22:63.22:0,63,2215	0/0:18,0:18:54.14:0,54,1611	0/0:29,0:29:87.26:0,87,2997	1/1:6,19:25:54.19:1326,54,0	0/0:22,0:22:63.20:0,63,2111	0/0:29,0:29:87.28:0,87,3079	0/0:23,0:23:69.22:0,69,2239
chr10	5213582	.	CG	C	1038.08	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.865;DP=805;FS=4.522;HRun=1;HaplotypeScore=87.6135;InbreedingCoeff=0.9918;MQ=87.90;MQ0=0;MQRankSum=-0.000;QD=35.80;ReadPosRankSum=2.296;VQSLOD=3.9626;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,135,2123	0/0:7,0:7:18.06:0,18,287	0/0:25,0:25:72.24:0,72,1103	0/0:37,0:37:41.94:0,42,1106	0/0:20,0:20:60.16:0,60,923	0/0:26,0:26:78.22:0,78,1218	0/0:34,0:34:99:0,102,1601	0/0:25,0:25:75.24:0,75,1167	0/0:24,0:24:72.25:0,72,1150	0/0:30,0:30:87.29:0,87,1371	0/0:21,0:21:57.19:0,57,907	0/0:51,0:51:99:0,154,2443	0/0:22,0:22:63.21:0,63,1005	0/0:43,0:43:99:0,129,2037	0/0:27,0:27:78.25:0,78,1221	1/1:0,29:29:81.27:1133,81,0	0/0:39,0:39:99:0,117,1843	0/0:34,0:34:96.33:0,96,1532	0/0:19,0:19:48.14:0,48,740	0/0:18,0:18:51.17:0,51,806	0/0:49,0:49:99:0,138,2180	0/0:19,0:19:57.19:0,57,910	0/0:28,0:28:78.27:0,78,1246	0/0:42,0:42:99:0,126,1985	0/0:21,0:21:63.21:0,63,1007	0/0:29,0:29:87.30:0,87,1382	0/0:29,0:29:87.28:0,87,1365	0/0:11,0:11:33.11:0,33,527
chr10	5216231	.	TA	T	635.41	PASS	AB=0.916;AC=13;AF=0.232;AN=56;BaseQRankSum=4.747;DP=516;FS=6.074;HRun=15;HaplotypeScore=75.3758;InbreedingCoeff=0.4142;MQ=67.87;MQ0=4;MQRankSum=0.538;QD=3.65;ReadPosRankSum=3.111;VQSLOD=0.6488;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:24:0.94:0,1,23	0/0:11,1:12:4.73:0,5,165	0/1:23,1:14:3.92:4,0,25	0/1:12,1:8:8.26:8,0,20	0/0:24,0:25:41.41:0,41,307	0/0:31,1:33:19.53:0,20,382	0/0:13,0:13:23.97:0,24,204	0/0:18,0:20:16.69:0,17,85	0/1:10,1:11:1.31:1,0,103	0/0:23,1:24:19.67:0,20,283	0/0:17,2:20:9.29:0,9,297	0/0:20,1:24:28.19:0,28,329	0/0:16,1:17:27.05:0,27,221	0/0:18,0:22:29.79:0,30,240	0/1:16,0:16:4.33:7,0,4	0/0:21,0:21:22.08:0,22,107	1/1:3,12:15:26.54:172,27,0	0/1:10,0:9:3.95:6,0,4	0/0:11,0:12:26.55:0,27,190	0/0:23,1:25:9.46:0,9,302	0/0:7,0:7:8.90:0,9,69	0/0:11,0:11:20.99:0,21,182	0/0:19,0:21:25.97:0,26,229	0/0:10,0:10:27.46:0,27,234	0/1:23,0:23:0.98:1,0,1	1/1:10,12:23:9.34:171,9,0	0/1:6,11:17:20.15:141,0,20	1/1:3,18:22:43.38:275,43,0
chr10	5216245	.	AAGAAGAAG	A	3798.45	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=4.203;DP=553;FS=2.099;HRun=0;HaplotypeScore=136.7714;InbreedingCoeff=0.9436;MQ=71.70;MQ0=5;MQRankSum=-8.082;QD=30.88;ReadPosRankSum=-2.872;VQSLOD=3.1732;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:21,1:21:8.04:270,8,0	0/0:10,0:10:27.02:0,27,861	0/0:27,0:17:15:0,15,632	0/0:19,0:14:34.22:0,34,571	0/0:22,0:22:35.19:0,35,1980	0/0:28,0:28:75.03:0,75,2594	0/0:17,0:17:38.98:0,39,1259	1/1:19,5:25:51.20:1132,51,0	0/0:9,0:9:23.94:0,24,724	0/0:27,0:27:59.88:0,60,2094	0/0:21,0:21:30.59:0,31,1495	0/0:24,0:24:59.90:0,60,1889	0/0:20,0:20:59.98:0,60,1762	0/0:20,0:20:38.83:0,39,1203	1/1:15,2:17:47.16:660,47,0	1/1:7,13:20:3.14:707,3,0	0/0:15,0:15:32.94:0,33,1044	1/1:9,2:10:23.59:445,24,0	0/0:16,0:16:43.86:0,44,1177	0/0:25,0:25:52.59:0,53,1759	0/0:11,0:11:29.94:0,30,892	0/0:9,0:9:20.80:0,21,557	0/0:25,0:25:50.47:0,50,1585	0/0:10,0:10:26.92:0,27,1071	1/1:28,0:28:30.10:584,30,0	0/0:27,0:27:40.67:0,41,1766	0/0:20,0:20:53.10:0,53,1543	0/0:26,0:26:66.12:0,66,1838
chr10	5216246	.	AGAAGAAG	A	3945.35	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=3.173;DP=530;FS=0.450;HRun=0;HaplotypeScore=121.7399;InbreedingCoeff=0.9112;MQ=72.85;MQ0=5;MQRankSum=-7.199;QD=32.34;ReadPosRankSum=-3.706;VQSLOD=2.2749;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,19:21:16.39:320,16,0	0/0:10,0:10:27.07:0,27,796	0/0:28,0:18:16.33:0,16,671	0/0:17,0:13:27.76:0,28,546	0/0:22,0:22:54.33:0,54,1917	0/0:27,0:27:75.01:0,75,2389	0/0:13,0:13:39:0,39,1156	1/1:21,4:25:41.74:1052,42,0	0/0:9,0:9:23.95:0,24,685	0/0:25,0:25:59.85:0,60,1959	0/0:21,0:21:43.62:0,44,1378	0/0:23,0:23:62.91:0,63,1801	0/0:20,0:20:59.92:0,60,1641	0/0:16,0:16:38.78:0,39,1105	1/1:13,2:17:51.03:821,51,0	0/1:19,0:19:4.36:532,0,4	0/0:16,0:15:32.40:0,32,988	1/1:8,1:10:28.28:494,28,0	0/0:15,0:15:45.06:0,45,1089	0/0:23,0:23:52.09:0,52,1598	0/0:10,0:10:30.07:0,30,857	0/0:8,0:8:20.83:0,21,508	0/0:21,0:21:42.97:0,43,1504	0/0:10,0:10:26.29:0,26,968	1/1:0,25:28:30:727,30,0	0/0:27,0:27:41.35:0,41,1681	0/0:20,0:20:52.99:0,53,1470	0/0:26,0:26:64.76:0,65,1727
chr10	5216521	.	C	CTT	4873.02	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=11.269;DP=626;FS=3.282;HRun=5;HaplotypeScore=92.6524;InbreedingCoeff=0.9159;MQ=70.97;MQ0=0;MQRankSum=-0.457;QD=27.69;ReadPosRankSum=-0.290;VQSLOD=3.9578;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,1:38:96.13:955,96,0	0/0:16,0:16:42.10:0,42,495	0/1:25,0:18:5.94:6,0,217	0/0:26,0:26:39.83:0,40,442	0/0:24,0:24:66.19:0,66,818	0/0:19,0:19:53.35:0,53,426	0/0:6,0:6:14.99:0,15,137	1/1:3,26:30:84.25:1298,84,0	0/0:19,0:19:51.15:0,51,638	0/0:20,0:20:51.15:0,51,649	0/0:27,0:27:75.23:0,75,954	0/0:19,0:19:54.16:0,54,676	0/0:22,0:22:54.13:0,54,646	0/0:16,0:16:45.14:0,45,572	1/1:22,0:22:51.17:693,51,0	1/1:3,19:24:63.21:1048,63,0	0/0:27,0:27:59.81:0,60,471	1/1:21,0:21:39.13:537,39,0	0/0:27,0:27:66.17:0,66,793	0/0:28,0:28:75.20:0,75,926	0/0:18,0:18:42.13:0,42,534	0/0:15,0:15:45.13:0,45,548	0/0:25,0:25:72.23:0,72,917	0/0:18,0:18:51.16:0,51,646	1/1:15,0:15:24.08:336,24,0	0/0:32,0:31:84.23:0,84,1033	0/0:22,0:22:60.15:0,60,732	0/0:24,0:24:69.22:0,69,877
chr10	5216526	.	T	TA	1604.88	PASS	AB=0.545;AC=11;AF=0.196;AN=56;BaseQRankSum=0.131;DP=629;FS=0.437;HRun=10;HaplotypeScore=91.5615;InbreedingCoeff=0.8760;MQ=70.33;MQ0=1;MQRankSum=0.429;QD=13.84;ReadPosRankSum=1.104;VQSLOD=3.8369;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:83.08:0,83,343	0/0:15,0:16:34.97:0,35,272	0/0:24,0:16:24.87:0,25,199	0/0:24,0:25:29.88:0,30,196	0/0:24,0:25:66.95:0,67,532	1/1:2,17:20:50.96:523,51,0	0/1:1,5:6:6.43:112,0,6	0/0:35,0:34:51.57:0,52,208	0/0:18,0:19:52.94:0,53,418	0/0:20,0:20:53.83:0,54,430	0/0:29,0:29:77.80:0,78,625	0/0:18,0:19:55.97:0,56,447	0/0:18,1:20:12.20:0,12,292	0/0:16,0:16:41.88:0,42,336	1/1:2,0:25:48.28:252,48,0	0/0:22,0:22:49.04:0,49,195	1/1:2,26:28:60.07:620,60,0	1/1:0,0:23:36.52:175,37,0	0/0:26,0:27:60.45:0,60,467	0/0:28,0:28:80.82:0,81,650	0/0:15,0:15:35.95:0,36,295	0/0:14,0:15:4.79:0,5,179	0/0:26,0:26:77.86:0,78,632	0/0:18,0:18:44.68:0,45,355	1/1:1,0:14:21.96:101,22,0	0/0:31,0:31:64.91:0,65,520	0/0:21,0:21:53.87:0,54,436	0/0:24,0:24:59.82:0,60,480
chr10	5217306	.	C	CGT	308.66	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-4.822;DP=575;FS=1.367;HRun=0;HaplotypeScore=76.0060;InbreedingCoeff=0.9551;MQ=75.39;MQ0=0;MQRankSum=-0.917;QD=22.05;ReadPosRankSum=-1.674;VQSLOD=3.6932;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:87.26:0,87,1115	0/0:6,0:6:12.04:0,12,156	0/0:10,0:10:27.04:0,27,317	0/0:15,0:16:32.10:0,32,365	0/0:18,0:18:48.07:0,48,602	0/0:17,0:17:42.09:0,42,512	0/0:28,0:28:72.17:0,72,888	1/1:6,8:14:24.08:402,24,0	0/0:20,0:20:51.17:0,51,663	0/0:25,0:25:57.18:0,57,741	0/0:8,0:8:18.04:0,18,220	0/0:32,0:32:90.25:0,90,1151	0/0:15,0:15:33.08:0,33,400	0/0:22,0:22:54.18:0,54,702	0/0:19,0:19:57.17:0,57,725	0/0:11,0:11:33.11:0,33,429	0/0:38,0:38:99:0,108,1383	0/0:33,0:33:90.29:0,90,1165	0/0:17,0:17:45.12:0,45,566	0/0:13,0:13:36.10:0,36,454	0/0:69,0:69:99:0,169,2150	0/0:12,0:12:24.08:0,24,312	0/0:9,0:9:27.04:0,27,331	0/0:24,0:24:60.20:0,60,780	0/0:24,0:24:57.19:0,57,741	0/0:18,0:18:45.10:0,45,566	0/0:14,0:14:42.14:0,42,545	0/0:11,0:11:27.09:0,27,351
chr10	5219354	.	T	TGAGC	1509.30	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-6.721;DP=676;FS=2.792;HRun=0;HaplotypeScore=115.0488;InbreedingCoeff=0.9644;MQ=68.16;MQ0=1;MQRankSum=0.177;QD=41.93;ReadPosRankSum=3.267;VQSLOD=4.3519;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:60.17:0,60,918	0/0:6,0:6:15.05:0,15,248	0/0:20,0:16:21.01:0,21,306	0/0:31,0:27:35.77:0,36,559	0/0:16,0:16:45.14:0,45,713	0/0:23,0:23:57.19:0,57,938	0/0:33,0:33:81.19:0,81,1216	0/0:28,0:28:57.17:0,57,871	0/0:21,0:21:51.17:0,51,848	0/0:28,0:28:66.21:0,66,1080	0/0:9,0:9:15.05:0,15,253	0/0:22,0:22:54.17:0,54,873	0/0:24,0:24:57.17:0,57,901	0/0:34,0:34:87.30:0,87,1422	0/0:28,0:28:81.25:0,81,1281	0/0:30,0:30:81.26:0,81,1323	1/1:5,30:36:66.23:1604,66,0	0/0:18,0:18:45.15:0,45,740	0/0:21,0:21:35.87:0,36,481	0/0:13,0:13:33.11:0,33,552	0/0:52,0:52:99:0,126,1980	0/0:23,0:23:45.14:0,45,715	0/0:16,0:16:36.11:0,36,554	0/0:25,0:25:57.45:0,57,960	0/0:13,0:13:30.07:0,30,449	0/0:36,0:36:66.17:0,66,994	0/0:26,0:26:63.18:0,63,1002	0/0:17,0:17:39.10:0,39,597
chr10	5219508	.	TG	T	2341.33	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.204;DP=726;FS=0.446;HRun=5;HaplotypeScore=75.0602;InbreedingCoeff=0.9977;MQ=81.89;MQ0=0;MQRankSum=-3.824;QD=26.01;ReadPosRankSum=1.812;VQSLOD=3.1189;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:87.27:0,87,1164	0/0:9,0:9:21.07:0,21,287	0/0:24,0:23:52.45:0,52,714	0/0:28,0:28:27.58:0,28,695	0/0:21,0:21:60.19:0,60,804	0/0:31,0:31:90.30:0,90,1231	0/0:33,0:33:93.24:0,93,1220	0/0:38,0:38:92.20:0,92,541	0/0:26,0:26:75.23:0,75,1008	0/0:21,0:21:57.66:0,58,780	0/0:12,0:12:36.11:0,36,469	0/0:29,0:29:81.27:0,81,1105	0/0:23,0:23:69.23:0,69,941	0/0:39,0:39:99:0,117,1586	1/1:4,38:42:96.24:1089,96,0	0/0:40,0:40:99:0,108,1459	0/0:28,0:28:72.24:0,72,980	1/1:0,26:26:66.19:749,66,0	0/0:20,0:20:51.17:0,51,685	0/0:17,0:17:48.16:0,48,652	0/0:45,0:45:99:0,129,1759	0/0:12,0:12:33.11:0,33,449	0/0:15,0:15:45.13:0,45,598	0/0:45,0:45:99:0,120,1621	1/1:1,21:22:57.16:646,57,0	0/0:20,0:20:57.18:0,57,766	0/0:20,0:20:57.18:0,57,763	0/0:10,0:10:27.05:0,27,332
chr10	5219765	.	G	GT	2175.12	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-10.984;DP=726;FS=0.000;HRun=4;HaplotypeScore=67.1056;InbreedingCoeff=0.9995;MQ=92.30;MQ0=0;MQRankSum=-4.656;QD=35.66;ReadPosRankSum=2.493;VQSLOD=4.0557;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,99,1099	0/0:19,0:19:54.15:0,54,613	0/0:36,0:36:87.23:0,87,973	0/0:24,0:24:63.07:0,63,685	0/0:22,0:22:66.19:0,66,748	0/0:24,0:24:69.20:0,69,782	0/0:19,0:19:51.14:0,51,578	0/0:32,0:32:87.24:0,87,979	0/0:28,0:28:81.23:0,81,918	0/0:20,0:20:57.16:0,57,646	0/0:17,0:17:45.13:0,45,510	0/0:35,0:35:90.22:0,90,1000	0/0:30,0:30:75.21:0,75,851	0/0:30,0:30:84.24:0,84,953	0/0:35,0:35:99:0,102,1157	1/1:2,29:31:81.27:1108,81,0	1/1:1,29:30:87.29:1189,87,0	0/0:23,0:23:57.16:0,57,645	0/0:27,0:27:63.18:0,63,713	0/0:31,0:31:87.25:0,87,987	0/0:24,0:24:66.19:0,66,748	0/0:19,0:19:51.14:0,51,578	0/0:22,0:22:57.16:0,57,646	0/0:27,0:27:81.21:0,81,907	0/0:23,0:23:63.18:0,63,714	0/0:21,0:21:60.17:0,60,681	0/0:31,0:31:90.26:0,90,1020	0/0:10,0:10:27.08:0,27,306
chr10	5220020	.	G	GA	2765.08	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-7.667;DP=773;FS=2.846;HRun=9;HaplotypeScore=93.3740;InbreedingCoeff=0.9966;MQ=61.83;MQ0=9;MQRankSum=1.669;QD=19.61;ReadPosRankSum=0.393;VQSLOD=3.6805;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:9,0:30:61.35:343,61,0	0/0:14,0:15:37.39:0,37,300	0/0:69,0:22:39.61:0,40,307	0/0:69,0:27:27.08:0,27,243	0/0:21,0:21:53.95:0,54,463	0/0:26,1:27:44.80:0,45,618	0/0:23,0:24:65.77:0,66,550	1/1:7,24:32:55.47:732,55,0	0/0:19,0:19:47.99:0,48,417	0/0:24,0:24:68.90:0,69,587	0/0:24,0:24:65.98:0,66,573	0/0:22,0:22:62.98:0,63,544	0/0:26,0:26:68.97:0,69,595	0/0:24,0:24:59.96:0,60,518	1/1:3,21:24:57.11:631,57,0	0/0:32,0:32:28.10:0,28,65	0/0:25,0:25:17.37:0,17,41	1/1:5,20:27:47.94:498,48,0	0/0:23,1:24:26.76:0,27,461	0/0:27,0:27:71.98:0,72,624	0/0:14,0:14:38.99:0,39,338	0/0:20,0:20:59.99:0,60,521	0/0:39,0:39:99:0,102,866	0/0:18,0:18:38.93:0,39,329	1/1:2,26:28:46.19:737,46,0	0/0:29,0:29:68.96:0,69,596	0/0:31,0:31:77.95:0,78,677	0/0:9,0:9:23.99:0,24,208
chr10	5220027	.	AAAGGAAAGG	A	2700.38	PASS	AB=0.981;AC=6;AF=0.107;AN=56;BaseQRankSum=8.056;DP=809;FS=4.093;HRun=0;HaplotypeScore=206.3193;InbreedingCoeff=0.6255;MQ=61.36;MQ0=9;MQRankSum=-7.592;QD=22.69;ReadPosRankSum=0.596;VQSLOD=2.5274;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:59.73:0,60,2728	0/0:16,0:16:48.15:0,48,1961	0/0:77,0:25:61.31:0,61,1244	0/0:77,0:32:34.52:0,35,1155	0/0:22,0:22:66.16:0,66,2482	0/0:30,0:30:90.31:0,90,4016	0/0:29,0:29:87.18:0,87,2904	0/1:35,0:35:37.88:38,0,2550	0/0:21,0:21:63.21:0,63,2330	0/0:25,0:25:72.22:0,72,3127	0/0:26,0:26:78.26:0,78,3111	0/0:22,0:22:66.21:0,66,2846	0/0:25,0:25:75.22:0,75,2892	0/0:23,0:23:66.17:0,66,2611	0/0:24,0:24:23.64:0,24,2067	1/1:1,33:34:72.17:2099,72,0	1/1:25,0:25:36.12:657,36,0	0/1:24,0:25:42.77:43,0,1485	0/0:27,0:27:77.82:0,78,2861	0/0:26,0:26:78.25:0,78,2881	0/0:15,0:15:45.15:0,45,1889	0/0:22,0:22:66.22:0,66,2793	0/0:36,0:36:99:0,108,3977	0/0:17,0:17:48.13:0,48,1885	0/0:34,0:34:59.83:0,60,3282	0/0:27,0:27:75.21:0,75,3203	0/0:32,0:32:87.28:0,87,3865	0/0:8,0:8:24.08:0,24,1073
chr10	5220028	.	AAGGAAAGG	A	2420.71	PASS	AB=0.969;AC=6;AF=0.107;AN=56;BaseQRankSum=8.836;DP=815;FS=5.354;HRun=0;HaplotypeScore=194.4223;InbreedingCoeff=0.6521;MQ=61.17;MQ0=9;MQRankSum=-8.246;QD=21.05;ReadPosRankSum=1.869;VQSLOD=2.9370;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:30:9.72:10,0,2342	0/0:16,0:16:48.16:0,48,1830	0/0:77,0:24:67.98:0,68,1329	0/0:78,0:33:43.01:0,43,1200	0/0:22,0:22:66.19:0,66,2342	0/0:30,0:30:90.31:0,90,3707	0/0:32,0:32:96.27:0,96,3089	0/0:36,0:36:71.36:0,71,2730	0/0:21,0:21:63.21:0,63,2197	0/0:24,0:24:72.24:0,72,2876	0/0:26,0:26:78.27:0,78,2929	0/0:22,0:22:66.22:0,66,2637	0/0:26,0:26:78.26:0,78,2814	0/0:23,0:23:66.20:0,66,2438	0/0:25,0:25:59.82:0,60,2134	1/1:34,0:34:72.25:1527,72,0	1/1:3,22:25:36.12:1007,36,0	0/1:26,0:26:9.76:10,0,1507	0/0:28,0:28:81.02:0,81,2806	0/0:26,0:26:78.26:0,78,2756	0/0:15,0:15:45.15:0,45,1782	0/0:22,0:22:66.22:0,66,2602	0/0:36,0:36:99:0,108,3741	0/0:17,0:17:48.16:0,48,1772	0/0:34,0:34:84.28:0,84,3095	0/0:26,0:26:75.23:0,75,2962	0/0:30,0:30:87.28:0,87,3572	0/0:8,0:8:24.08:0,24,984
chr10	5220873	.	A	AT	1341.85	PASS	AB=0.938;AC=10;AF=0.185;AN=54;BaseQRankSum=5.362;DP=364;FS=6.697;HRun=6;HaplotypeScore=54.4863;InbreedingCoeff=0.6624;MQ=89.80;MQ0=7;MQRankSum=-3.303;QD=16.99;ReadPosRankSum=0.544;VQSLOD=3.0058;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:6,0:7:10.82:11,0,18	0/0:3,0:3:9.02:0,9,92	0/0:43,1:23:17.18:0,17,140	0/0:29,1:22:18.91:0,19,150	0/0:8,0:8:24.05:0,24,244	0/0:10,0:10:27.05:0,27,274	0/0:10,0:10:30.06:0,30,305	0/1:23,0:23:99:226,0,127	0/0:3,0:3:9.02:0,9,91	0/0:12,0:12:33.04:0,33,327	0/0:12,0:12:33.05:0,33,329	0/0:9,0:9:27.05:0,27,268	0/0:9,0:9:24.02:0,24,235	0/0:9,0:9:15.01:0,15,145	1/1:1,4:5:9.03:111,9,0	1/1:1,4:5:8.56:111,9,0	0/0:26,0:26:78.07:0,78,755	1/1:2,29:31:69.22:854,69,0	0/0:19,0:19:54.10:0,54,542	0/0:9,0:9:24.03:0,24,237	./.	0/0:1,0:1:2.99:0,3,23	0/0:7,0:7:21.02:0,21,206	0/0:9,0:9:27:0,27,246	1/1:0,8:8:15.05:186,15,0	0/0:15,0:15:45.07:0,45,443	0/0:26,0:26:72.05:0,72,691	0/0:13,0:13:39.07:0,39,389
chr10	5221129	.	A	AT	3014.74	PASS	AC=14;AF=0.259;AN=54;BaseQRankSum=2.076;DP=203;FS=12.216;HRun=6;HaplotypeScore=22.1324;InbreedingCoeff=0.7874;MQ=72.46;MQ0=1;MQRankSum=-0.405;QD=30.15;ReadPosRankSum=1.381;VQSLOD=2.4248;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,9:12:25.10:336,25,0	0/0:4,0:4:12.03:0,12,122	0/0:7,0:6:11.96:0,12,95	./.	0/0:3,0:3:9.02:0,9,92	0/0:15,0:15:39.08:0,39,398	0/0:2,0:2:6.01:0,6,61	1/1:4,19:23:57.18:712,57,0	0/0:3,0:3:6.01:0,6,61	0/0:8,0:8:24.05:0,24,245	0/0:1,0:1:3.01:0,3,31	0/0:5,0:5:15.02:0,15,146	0/0:2,0:2:6:0,6,55	0/0:3,0:3:9.01:0,9,85	1/1:0,7:7:21.07:264,21,0	1/1:0,3:3:9.03:113,9,0	1/1:2,20:22:57.18:717,57,0	1/1:1,19:20:54.17:679,54,0	0/0:9,0:9:27.06:0,27,275	0/0:4,0:4:12.03:0,12,122	0/0:2,0:2:6.01:0,6,61	0/0:3,0:3:9.02:0,9,92	0/0:1,0:1:3.01:0,3,31	0/0:3,0:3:6.01:0,6,61	1/1:1,12:13:30.10:377,30,0	0/0:10,0:10:21.04:0,21,214	0/0:4,0:4:12.03:0,12,122	0/0:10,0:10:30.07:0,30,306
chr10	5221425	.	G	GT	1864.82	PASS	AB=0.864;AC=20;AF=0.357;AN=56;BaseQRankSum=0.019;DP=521;FS=0.871;HRun=12;HaplotypeScore=71.0468;InbreedingCoeff=0.3927;MQ=76.96;MQ0=2;MQRankSum=-0.761;QD=7.12;ReadPosRankSum=-0.077;VQSLOD=2.2744;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:35:56.35:0,56,168	0/1:10,0:10:15.27:15,0,126	0/1:24,0:18:15.19:15,0,65	0/1:26,0:20:13.24:17,0,13	0/0:21,0:23:17.95:0,18,344	0/0:11,0:11:23.84:0,24,175	0/0:19,0:20:46.60:0,47,318	1/1:10,3:35:67.33:403,67,0	0/0:18,0:19:25.52:0,26,267	0/0:13,1:14:29.79:0,30,217	0/1:5,1:6:15.43:15,0,57	0/0:21,3:24:53.51:0,54,384	0/0:17,0:18:42.63:0,43,280	0/0:19,0:20:40.56:0,41,274	1/1:3,19:22:18.20:303,18,0	1/1:16,0:16:29.79:127,30,0	0/0:29,1:32:40.34:0,40,433	0/1:8,23:34:0.53:361,0,1	0/1:20,3:23:36.87:37,0,246	0/0:9,0:9:23.86:0,24,175	0/0:6,0:6:14.91:0,15,109	0/0:4,0:5:10.99:0,11,71	0/1:4,0:4:11.36:11,0,28	0/0:19,1:23:15.65:0,16,248	0/1:2,4:7:13.06:35,0,13	1/1:11,16:28:25.77:357,26,0	1/1:3,13:16:18.03:175,18,0	1/1:2,8:9:2.21:183,2,0
chr10	5221434	.	T	TTG	484.08	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=4.627;DP=523;FS=1.374;HRun=0;HaplotypeScore=87.6686;InbreedingCoeff=0.3347;MQ=75.72;MQ0=3;MQRankSum=2.174;QD=5.50;ReadPosRankSum=0.834;VQSLOD=2.9548;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:35:89.90:0,90,664	0/0:10,0:10:29.99:0,30,359	0/1:29,0:18:19.37:19,0,215	0/0:27,0:19:17.12:0,17,155	0/0:22,0:22:50.71:0,51,799	0/0:12,0:12:36.08:0,36,437	0/0:20,0:20:57.10:0,57,717	0/1:37,0:37:99:132,0,221	0/0:19,0:19:50.24:0,50,616	0/0:14,0:14:36.09:0,36,467	0/0:7,0:7:20.74:0,21,220	0/0:24,0:24:60.16:0,60,799	0/0:20,0:20:60.12:0,60,722	0/0:20,0:20:57.12:0,57,696	0/0:24,0:24:45.15:0,45,281	1/1:0,10:15:33.09:443,33,0	0/0:31,0:31:92.85:0,93,1116	0/0:33,0:33:44.28:0,44,337	0/0:22,0:21:59.44:0,59,698	0/0:12,0:12:33.05:0,33,392	0/0:6,0:6:18.05:0,18,234	0/0:5,0:5:14.98:0,15,169	0/0:4,0:4:11.99:0,12,123	0/0:18,0:18:50.83:0,51,610	0/1:7,0:7:11.38:11,0,65	0/0:24,0:24:40.86:0,41,330	0/0:16,0:16:28.24:0,28,169	0/0:10,0:9:22.22:0,22,129
chr10	5224085	.	G	GT	1201.24	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-0.586;DP=742;FS=7.124;HRun=2;HaplotypeScore=64.6245;InbreedingCoeff=0.8145;MQ=54.85;MQ0=49;MQRankSum=0.668;QD=35.33;ReadPosRankSum=0.406;VQSLOD=3.8255;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:37:99:0,108,1338	0/0:6,0:5:15.05:0,15,186	0/0:26,0:4:6.01:0,6,62	0/0:30,0:3:6.02:0,6,74	0/0:18,0:17:45.14:0,45,557	0/0:19,0:18:48.15:0,48,595	0/0:29,0:27:60.17:0,60,727	0/0:35,0:31:87.26:0,87,1062	0/0:22,0:22:60.19:0,60,743	0/0:28,0:26:75.23:0,75,918	0/0:15,0:14:42.13:0,42,521	0/0:25,0:22:66.21:0,66,814	0/0:14,0:14:42.13:0,42,521	0/0:33,0:31:90.28:0,90,1115	0/0:30,0:27:39.12:0,39,483	1/1:2,32:34:90.30:1296,90,0	0/0:30,0:30:45.14:0,45,553	0/0:32,0:31:63.19:0,63,781	0/0:17,0:12:36.11:0,36,446	0/0:40,0:39:99:0,114,1386	0/0:46,0:46:99:0,123,1511	0/0:36,0:35:96.13:0,96,1190	0/0:17,0:16:45.14:0,45,558	0/0:34,0:32:87.27:0,87,1079	0/0:26,0:25:75.24:0,75,930	0/0:22,0:21:63.20:0,63,781	0/0:22,0:21:63.20:0,63,781	0/0:16,0:16:45.09:0,45,558
chr10	5224135	.	A	ATATGTG	2790.26	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=3.779;DP=682;FS=0.464;HRun=0;HaplotypeScore=155.4851;InbreedingCoeff=0.5323;MQ=53.42;MQ0=7;MQRankSum=-3.874;QD=10.57;ReadPosRankSum=-2.822;VQSLOD=2.4277;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:39,0:38:19.47:19,0,388	0/0:6,0:6:18.03:0,18,337	0/0:27,0:16:44.74:0,45,380	0/0:28,0:17:44.97:0,45,401	0/0:20,0:22:50.90:0,51,632	0/0:13,0:14:38.94:0,39,443	0/0:29,0:31:65.63:0,66,837	1/1:26,0:23:65.45:574,65,0	0/0:16,0:17:41.91:0,42,442	0/0:23,0:23:55.55:0,56,542	0/0:14,0:13:32.89:0,33,287	0/0:18,0:20:38.43:0,38,465	0/0:21,0:21:56.67:0,57,700	0/0:17,0:17:47.98:0,48,584	1/1:10,3:40:17.89:448,18,0	0/1:29,0:29:99:327,0,167	1/1:6,0:34:11.70:124,12,0	1/1:6,16:23:15.52:484,16,0	0/0:15,0:13:26.08:0,26,223	0/0:22,0:22:47.51:0,48,478	0/0:48,0:48:99:0,102,924	0/0:34,0:35:92.59:0,93,1018	0/0:16,0:26:43.87:0,44,412	0/0:28,0:30:67.71:0,68,645	1/1:28,0:28:32.99:393,33,0	0/1:23,0:23:99:302,0,209	0/1:11,0:10:95.72:119,0,96	0/1:10,0:9:81.75:185,0,82
chr10	5224721	.	T	TCTC	2017.51	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-7.433;DP=799;FS=6.890;HRun=0;HaplotypeScore=110.9099;InbreedingCoeff=0.9683;MQ=71.34;MQ0=0;MQRankSum=-1.819;QD=56.04;ReadPosRankSum=2.863;VQSLOD=5.9380;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,120,2036	0/0:8,0:8:24.08:0,24,409	0/0:35,0:35:84.32:0,84,1525	0/0:34,0:34:90.27:0,90,1447	0/0:22,0:22:66.23:0,66,1125	0/0:31,0:31:90.31:0,90,1528	0/0:39,0:39:99:0,111,1823	0/0:19,0:19:57.19:0,57,949	0/0:34,0:34:99:0,99,1582	0/0:31,0:31:87.30:0,87,1467	0/0:17,0:17:48.16:0,48,815	0/0:35,0:35:99:0,99,1681	0/0:35,0:35:96.31:0,96,1611	0/0:34,0:34:99:0,99,1685	0/0:32,0:32:93.32:0,93,1583	1/1:2,33:36:93.32:2112,93,0	0/0:43,0:43:99:0,129,2140	0/0:31,0:31:93.30:0,93,1547	0/0:20,0:20:57.19:0,57,972	0/0:12,0:12:36.12:0,36,612	0/0:56,0:55:99:0,151,2537	0/0:29,0:29:81.28:0,81,1378	0/0:15,0:15:45.14:0,45,741	0/0:26,0:26:75.26:0,75,1275	0/0:19,0:19:57.18:0,57,945	0/0:31,0:31:93.32:0,93,1587	0/0:31,0:31:93.32:0,93,1559	0/0:4,0:4:12.04:0,12,205
chr10	5225346	.	T	TCAAAA	418.64	PASS	AB=1.000;AC=7;AF=0.140;AN=50;BaseQRankSum=1.124;DP=656;FS=5.819;HRun=0;HaplotypeScore=106.8860;InbreedingCoeff=0.5967;MQ=44.09;MQ0=90;MQRankSum=-3.415;QD=4.27;ReadPosRankSum=-3.888;VQSLOD=0.4585;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:10,0:9:12.04:0,12,203	./.	./.	0/0:28,0:24:17.20:0,17,299	0/1:25,0:24:4.10:4,0,127	0/0:22,0:21:11.35:0,11,187	0/0:26,0:15:5.99:0,6,50	0/0:24,0:20:23.87:0,24,380	0/0:27,0:21:21.06:0,21,323	0/0:22,0:19:8.53:0,9,127	0/0:19,0:17:12.03:0,12,185	0/0:27,0:26:21.03:0,21,324	0/0:31,0:30:23.63:0,24,365	1/1:18,14:28:6.02:166,6,0	0/0:13,0:26:6.02:0,6,70	0/0:22,0:22:24.06:0,24,369	1/1:10,6:16:3.01:83,3,0	0/0:14,0:10:5.99:0,6,74	0/0:28,0:27:27:0,27,382	0/0:23,0:22:20.48:0,20,293	0/0:28,0:27:27.09:0,27,422	0/0:23,0:22:8.85:0,9,116	0/0:39,0:32:18.04:0,18,283	1/1:12,12:18:12.93:284,13,0	0/0:25,0:24:23.91:0,24,385	0/0:32,0:29:18.04:0,18,288	0/0:11,0:10:9.03:0,9,124
chr10	5225511	.	A	AAAAC	401.55	PASS	AC=6;AF=0.143;AN=42;BaseQRankSum=-0.315;DP=465;FS=0.000;HRun=0;HaplotypeScore=52.3127;InbreedingCoeff=0.4233;MQ=20.43;MQ0=281;MQRankSum=-0.076;QD=8.19;ReadPosRankSum=-0.815;VQSLOD=1.2590;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/0:14,0:7:12.04:0,12,192	./.	./.	0/0:14,0:9:15.01:0,15,199	0/0:23,0:13:6.02:0,6,96	0/0:11,0:4:3.01:0,3,48	./.	0/0:14,0:2:3.01:0,3,48	0/0:20,0:11:18.06:0,18,287	0/0:16,0:12:15.05:0,15,239	./.	0/0:19,0:11:2.40:0,2,47	0/0:17,0:9:6.02:0,6,95	1/1:10,13:9:6.02:144,6,0	0/0:22,0:12:7.67:0,8,141	0/0:16,0:3:6.02:0,6,96	1/1:4,4:1:0.47:1,0,0	./.	0/0:16,0:13:18.06:0,18,270	./.	0/0:20,0:11:5.43:0,5,96	0/0:12,0:7:8.53:0,9,143	0/0:18,0:1:3.01:0,3,48	1/1:8,10:17:15.05:359,15,0	0/0:24,0:11:15.05:0,15,239	0/0:20,0:9:6.02:0,6,96	0/0:9,0:5:2.83:0,3,48
chr10	5228555	.	GGA	G	781.90	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.314;DP=738;FS=6.818;HRun=0;HaplotypeScore=106.0891;InbreedingCoeff=0.9753;MQ=67.14;MQ0=0;MQRankSum=-3.703;QD=26.06;ReadPosRankSum=0.764;VQSLOD=4.4128;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:97.07:0,97,481	0/0:7,0:7:21.05:0,21,318	0/0:29,0:27:77.78:0,78,1207	0/0:24,0:23:45.80:0,46,816	0/0:25,0:25:75.23:0,75,1194	0/0:25,0:25:75.24:0,75,1233	0/0:38,0:38:99:0,114,1747	0/0:19,0:19:37.63:0,38,252	0/0:23,0:23:69.19:0,69,1080	0/0:38,0:38:99:0,108,1651	0/0:15,0:15:45.15:0,45,751	0/0:34,0:34:99:0,102,1673	0/0:23,0:23:69.22:0,69,1105	0/0:24,0:24:66.15:0,66,1012	0/0:43,0:43:91.32:0,91,431	1/1:4,26:30:63.13:877,63,0	0/0:43,0:43:99:0,100,488	0/0:16,0:16:13.74:0,14,129	0/0:17,0:17:51.17:0,51,840	0/0:22,0:22:66.16:0,66,1059	0/0:33,0:33:91.81:0,92,1416	0/0:28,0:28:84.14:0,84,1181	0/0:13,0:13:38.89:0,39,570	0/0:30,0:30:87.29:0,87,1474	0/0:20,0:20:52.92:0,53,280	0/0:28,0:28:72.19:0,72,1152	0/0:32,0:32:90.30:0,90,1510	0/0:17,0:17:51.17:0,51,830
chr10	5228557	.	AG	A	4039.32	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=13.604;DP=729;FS=0.333;HRun=8;HaplotypeScore=79.5253;InbreedingCoeff=0.9984;MQ=67.95;MQ0=0;MQRankSum=-0.560;QD=19.23;ReadPosRankSum=3.706;VQSLOD=3.5340;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,38:43:93.14:898,93,0	0/0:7,0:7:18.06:0,18,217	0/0:32,0:30:62.76:0,63,743	0/0:23,0:22:49.34:0,49,568	0/0:27,0:27:75.20:0,75,880	0/0:25,0:25:72.22:0,72,870	0/0:39,0:39:99:0,105,1267	1/1:2,15:17:45.06:429,45,0	0/0:24,0:24:60.18:0,60,725	0/0:34,0:34:87.27:0,87,1048	0/0:15,0:15:45.12:0,45,529	0/0:35,0:35:99:0,102,1192	0/0:24,0:24:66.17:0,66,778	0/0:22,0:22:54.17:0,54,652	1/1:3,39:42:90.14:869,90,0	1/1:30,0:30:32.14:85,32,0	1/1:6,36:42:93.14:898,93,0	1/1:1,15:16:42.03:397,42,0	0/0:17,0:17:48.15:0,48,579	0/0:22,0:22:63.18:0,63,750	0/0:30,0:30:75.22:0,75,892	0/0:27,0:27:66.18:0,66,771	0/0:12,0:12:33.07:0,33,373	0/0:29,0:29:87.26:0,87,1039	1/1:3,17:20:48.07:464,48,0	0/0:27,0:27:69.17:0,69,816	0/0:31,0:31:87.27:0,87,1050	0/0:17,0:17:51.16:0,51,614
chr10	5229193	.	ATC	A	892.88	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.417;DP=813;FS=0.794;HRun=0;HaplotypeScore=98.7314;InbreedingCoeff=0.9950;MQ=84.04;MQ0=0;MQRankSum=-2.448;QD=34.34;ReadPosRankSum=-2.487;VQSLOD=4.6491;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:60,0:60:99:0,175,3054	0/0:9,0:9:21.07:0,21,384	0/0:27,0:27:75.23:0,75,1310	0/0:25,0:25:72.14:0,72,1236	0/0:32,0:32:87.30:0,87,1593	0/0:31,0:31:87.30:0,87,1568	0/0:35,0:35:99:0,102,1832	1/1:2,24:26:69.23:988,69,0	0/0:32,0:32:93.32:0,93,1704	0/0:42,0:41:99:0,123,2221	0/0:19,0:19:54.19:0,54,988	0/0:37,0:37:99:0,102,1856	0/0:24,0:24:72.23:0,72,1281	0/0:34,0:34:99:0,99,1803	0/0:38,0:37:99:0,114,2059	0/0:25,0:25:69.13:0,69,1110	0/0:26,0:26:72.25:0,72,1304	0/0:22,0:22:57.07:0,57,939	0/0:19,0:19:57.20:0,57,1045	0/0:26,0:26:72.25:0,72,1318	0/0:37,0:37:99:0,102,1826	0/0:27,0:27:78.27:0,78,1409	0/0:22,0:22:66.21:0,66,1178	0/0:37,0:37:99:0,102,1837	0/0:26,0:26:69.24:0,69,1252	0/0:34,0:34:99:0,99,1811	0/0:32,0:32:96.29:0,96,1697	0/0:9,0:9:27.09:0,27,495
chr10	5229290	.	GCA	G	521.97	PASS	AB=0.909;AC=3;AF=0.054;AN=56;BaseQRankSum=5.950;DP=895;FS=0.000;HRun=0;HaplotypeScore=147.4810;InbreedingCoeff=0.5244;MQ=60.35;MQ0=9;MQRankSum=-0.012;QD=11.60;ReadPosRankSum=1.051;VQSLOD=3.0221;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:49:99:0,120,1931	0/0:13,0:13:30.10:0,30,496	0/0:31,1:7:6.02:0,6,92	0/0:34,0:13:8.96:0,9,127	0/0:39,0:39:60.18:0,60,952	0/0:38,1:39:52.54:0,53,1350	0/0:39,0:39:96.26:0,96,1555	0/0:9,0:38:86.49:0,86,772	0/0:39,1:40:99:0,105,1703	0/0:32,1:33:49.42:0,49,1336	0/0:14,0:14:18.06:0,18,298	0/0:38,0:38:90.31:0,90,1477	0/0:34,1:35:40.37:0,40,1150	0/0:31,0:31:82.14:0,82,1307	0/0:44,1:45:76.53:0,77,1789	1/1:7,18:25:48.15:606,48,0	0/0:28,1:29:43.43:0,43,1222	0/1:18,2:20:21.57:22,0,716	0/0:22,0:22:45.15:0,45,744	0/0:23,1:24:22.33:0,22,858	0/0:66,0:66:99:0,175,2837	0/0:26,2:28:41.79:0,42,664	0/0:24,1:25:39.07:0,39,562	0/0:29,0:29:72.21:0,72,1136	0/0:25,1:26:27.09:0,27,449	0/0:38,0:38:32.72:0,33,1575	0/0:27,0:27:72.16:0,72,1081	0/0:14,1:15:4.26:0,4,555
chr10	5229588	.	A	AAATGTGGTATAGCGGGTCACATGGT	4217.42	PASS	AB=0.701;AC=38;AF=0.950;AN=40;BaseQRankSum=-2.700;DP=62;FS=2.980;HRun=0;HaplotypeScore=46.0377;InbreedingCoeff=-0.1772;MQ=121.54;MQ0=0;MQRankSum=-2.163;QD=70.29;ReadPosRankSum=-0.447;VQSLOD=3.5422;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	1/1:1,0:1:3.01:80,3,0	0/1:4,1:10:13.28:1630,0,13	0/1:5,0:7:14.25:371,0,14	./.	1/1:5,0:5:15.05:272,15,0	1/1:2,0:2:5.99:66,6,0	1/1:1,0:1:3.01:79,3,0	1/1:4,0:4:9.03:141,9,0	1/1:3,0:3:5.98:104,6,0	./.	./.	1/1:2,0:2:6.02:81,6,0	./.	1/1:2,0:2:3.01:121,3,0	1/1:2,0:2:5.98:95,6,0	./.	./.	1/1:4,0:4:6.02:125,6,0	1/1:1,0:1:3.01:103,3,0	1/1:2,0:2:6.02:168,6,0	1/1:3,0:3:9:157,9,0	1/1:3,0:3:6.02:116,6,0	./.	1/1:1,0:1:3.01:43,3,0	1/1:2,0:2:3.01:70,3,0	1/1:2,0:2:3.01:143,3,0	1/1:3,0:3:9.03:254,9,0
chr10	5231578	.	T	TTTA	536.96	PASS	AB=0.929;AC=20;AF=0.833;AN=24;BaseQRankSum=-3.498;DP=52;FS=19.453;HRun=0;HaplotypeScore=27.2873;InbreedingCoeff=0.0071;MQ=174.73;MQ0=5;MQRankSum=-2.984;QD=11.67;ReadPosRankSum=-3.380;VQSLOD=0.5820;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,1:1:2.98:21,3,0	./.	0/1:12,0:13:62.03:62,0,206	0/1:12,0:12:4.29:4,0,131	./.	./.	./.	./.	1/1:1,0:1:2.97:20,3,0	1/1:2,2:2:6.02:140,6,0	./.	1/1:0,3:4:3.01:69,3,0	./.	./.	1/1:0,1:2:3.01:69,3,0	1/1:2,0:2:6.01:80,6,0	./.	1/1:1,0:1:2.99:24,3,0	0/0:1,0:1:3.01:0,3,56	1/1:1,1:1:3.01:69,3,0	./.	./.	./.	./.	./.	./.	1/1:0,2:3:3.01:69,3,0	./.
chr10	5234025	.	A	AG	9501.12	PASS	AB=0.699;AC=54;AF=0.964;AN=56;BaseQRankSum=-2.242;DP=228;FS=10.208;HRun=1;HaplotypeScore=59.8304;InbreedingCoeff=-0.0491;MQ=81.49;MQ0=0;MQRankSum=-0.686;QD=41.67;ReadPosRankSum=1.179;VQSLOD=4.8450;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,14:14:27.09:429,27,0	1/1:0,3:3:9.03:144,9,0	0/1:3,8:11:4.08:414,0,4	0/1:7,2:9:33.99:157,0,34	1/1:1,5:6:12.04:191,12,0	1/1:1,4:5:15.05:239,15,0	1/1:0,12:12:36.12:574,36,0	1/1:2,14:16:45.15:698,45,0	1/1:1,9:10:27.09:430,27,0	1/1:1,6:7:18.05:264,18,0	1/1:1,2:3:7.84:101,8,0	1/1:2,12:13:36.12:574,36,0	1/1:0,6:6:18.06:287,18,0	1/1:1,6:7:21.07:335,21,0	1/1:0,12:12:36.12:573,36,0	1/1:0,11:11:33.11:526,33,0	1/1:0,10:10:27.09:431,27,0	1/1:0,6:6:15.05:239,15,0	1/1:1,5:6:15.05:240,15,0	1/1:2,7:9:27.09:408,27,0	1/1:0,9:9:24.08:381,24,0	1/1:0,6:6:18.06:287,18,0	1/1:0,9:9:24.08:382,24,0	1/1:0,2:2:6.02:96,6,0	1/1:0,8:8:24.08:382,24,0	1/1:1,6:7:18.06:287,18,0	1/1:1,7:8:21.07:335,21,0	1/1:0,2:2:6.02:96,6,0
chr10	5235023	.	A	AC	6069.14	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-15.813;DP=755;FS=0.714;HRun=1;HaplotypeScore=67.8121;InbreedingCoeff=1.0000;MQ=76.52;MQ0=0;MQRankSum=-2.314;QD=40.19;ReadPosRankSum=2.973;VQSLOD=5.5384;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,126,1636	0/0:17,0:17:51.17:0,51,661	0/0:26,0:26:66.21:0,66,836	0/0:26,0:26:66.02:0,66,793	0/0:20,0:20:60.19:0,60,776	0/0:24,0:24:72.22:0,72,920	0/0:24,0:24:72.15:0,72,886	0/0:29,0:29:81.21:0,81,1021	0/0:27,0:27:81.26:0,81,1052	0/0:31,0:31:90.29:0,90,1158	0/0:18,0:18:48.16:0,48,620	0/0:24,0:24:69.21:0,69,882	0/0:19,0:19:57.15:0,57,710	0/0:25,0:25:75.24:0,75,961	1/1:0,35:35:84.28:1259,84,0	1/1:2,36:38:99:1574,105,0	1/1:0,23:23:69.23:1034,69,0	1/1:0,26:25:72.24:1079,72,0	0/0:24,0:24:72.23:0,72,935	0/0:31,0:31:90.28:0,90,1154	0/0:46,0:45:99:0,132,1652	0/0:19,0:19:57.19:0,57,740	0/0:15,0:15:45.15:0,45,583	0/0:43,0:43:99:0,129,1660	1/1:0,29:29:75.25:1124,75,0	0/0:30,0:30:84.27:0,84,1091	0/0:23,0:23:69.22:0,69,896	0/0:16,0:16:48.16:0,48,622
chr10	5237027	.	A	AC	689.07	PASS	AB=0.611;AC=10;AF=0.179;AN=56;BaseQRankSum=8.485;DP=590;FS=8.618;HRun=2;HaplotypeScore=68.0140;InbreedingCoeff=0.6499;MQ=74.86;MQ0=0;MQRankSum=-2.740;QD=5.74;ReadPosRankSum=-2.509;VQSLOD=-0.7321;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:17,11:31:10.10:174,10,0	0/0:3,0:3:9.03:0,9,111	0/0:15,0:15:32.58:0,33,368	0/0:10,0:10:20.82:0,21,201	0/0:9,0:9:27.07:0,27,321	0/0:20,0:20:60.17:0,60,726	0/0:28,0:28:84.21:0,84,999	0/0:21,0:21:14.20:0,14,66	0/0:23,0:23:69.20:0,69,843	0/0:22,0:22:59.90:0,60,741	0/0:14,0:14:39.11:0,39,467	0/0:29,1:30:84.43:0,84,1055	0/0:17,0:17:51.16:0,51,632	0/0:36,0:36:99:0,108,1333	0/1:9,20:29:51.14:173,0,51	1/1:2,0:7:1.80:13,2,0	1/1:4,15:21:22.57:222,23,0	1/1:3,12:15:9.31:171,9,0	0/0:20,0:20:60.19:0,60,741	0/0:18,0:18:48.15:0,48,581	0/0:70,0:70:99:0,202,2461	0/0:16,0:16:48.15:0,48,594	0/0:14,0:14:39.12:0,39,475	0/0:34,0:34:93.29:0,93,1152	0/1:7,10:17:17.02:88,0,17	0/0:27,0:27:81.25:0,81,1000	0/0:19,0:19:51.15:0,51,618	0/0:4,0:4:12.04:0,12,149
chr10	5238003	.	CATCT	C	4403.91	PASS	AB=0.867;AC=34;AF=0.680;AN=50;BaseQRankSum=3.333;DP=698;FS=1.196;HRun=0;HaplotypeScore=125.1124;InbreedingCoeff=0.5100;MQ=65.55;MQ0=5;MQRankSum=1.456;QD=9.64;ReadPosRankSum=0.189;VQSLOD=4.2982;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:13,4:17:43.02:126,0,43	1/1:6,2:8:6.02:92,6,0	./.	./.	1/1:14,5:19:27:323,27,0	1/1:19,14:34:33.10:484,33,0	0/0:20,5:26:0.89:0,1,2	./.	0/0:18,0:18:27.04:0,27,531	1/1:30,7:38:13.99:395,14,0	1/1:16,6:22:18.06:275,18,0	1/1:13,9:22:12.04:183,12,0	1/1:15,14:29:14.87:354,15,0	1/1:14,9:23:15.05:229,15,0	1/1:35,0:35:12.03:127,12,0	0/0:25,0:31:39.08:0,39,569	0/1:27,0:29:21.29:21,0,25	0/0:12,0:13:2.96:0,3,20	1/1:15,6:19:18.06:275,18,0	0/1:19,11:30:99:359,0,303	1/1:14,3:17:18.02:230,18,0	1/1:20,0:23:17.87:158,18,0	1/1:13,11:24:21.07:320,21,0	1/1:10,0:10:12.02:161,12,0	1/1:31,0:31:24.05:244,24,0	0/0:34,0:34:42.12:0,42,794	0/1:23,2:24:49.48:49,0,699	0/0:26,0:25:30.04:0,30,601
chr10	5238047	.	TATCTATCTATCC	T	205.27	PASS	AB=0.885;AC=4;AF=0.071;AN=56;BaseQRankSum=6.054;DP=632;FS=4.321;HRun=0;HaplotypeScore=202.8805;InbreedingCoeff=-0.0415;MQ=55.64;MQ0=17;MQRankSum=-5.309;QD=1.99;ReadPosRankSum=-1.563;VQSLOD=2.5384;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:39.66:0,40,634	0/0:6,0:6:18:0,18,313	0/0:18,0:6:4.03:0,4,91	0/0:9,0:3:8.85:0,9,70	0/0:34,0:34:99:0,99,1379	0/0:26,0:26:41.77:0,42,1110	0/0:23,0:23:38.86:0,39,394	0/0:47,0:37:97.63:0,98,856	0/0:22,0:22:60.06:0,60,1470	0/0:29,0:29:81.16:0,81,1509	0/0:17,0:17:45.06:0,45,803	0/0:16,0:16:33.04:0,33,551	0/0:35,0:35:80.55:0,81,1180	0/0:19,0:19:39.08:0,39,757	0/1:35,0:35:10.90:36,0,11	0/0:19,0:19:47.61:0,48,1506	0/1:25,0:25:16.83:163,0,17	0/1:2,12:14:26.73:32,0,27	0/0:14,0:13:38.93:0,39,678	0/0:29,0:29:84.12:0,84,2045	0/0:17,0:17:41.99:0,42,693	0/0:16,0:16:11.52:0,12,333	0/0:17,0:17:36.07:0,36,778	0/0:15,0:15:39.04:0,39,582	0/1:29,0:29:25.99:84,0,26	0/0:31,0:31:93.18:0,93,2361	0/0:31,0:30:92.98:0,93,2500	0/0:18,0:17:48.08:0,48,1631
chr10	5238051	.	TATCTATCC	T	1212.87	PASS	AB=0.770;AC=6;AF=0.107;AN=56;BaseQRankSum=4.221;DP=643;FS=7.698;HRun=0;HaplotypeScore=159.4038;InbreedingCoeff=0.6150;MQ=55.90;MQ0=15;MQRankSum=-4.962;QD=11.34;ReadPosRankSum=-2.936;VQSLOD=1.3058;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:38.21:0,38,387	0/0:9,0:9:26.98:0,27,239	0/0:21,0:9:13.04:0,13,183	0/0:10,0:4:11.85:0,12,98	0/0:35,0:35:49.07:0,49,825	0/0:27,0:27:5.06:0,5,503	0/0:20,0:20:35.85:0,36,287	0/0:51,0:42:99:0,103,861	0/0:24,0:24:60:0,60,1214	0/0:28,0:28:75.58:0,76,789	0/0:15,0:15:45.04:0,45,472	0/0:17,0:17:36.01:0,36,334	0/0:36,0:36:80.59:0,81,761	0/0:17,0:17:39.04:0,39,412	1/1:2,31:33:12.04:330,12,0	0/0:19,0:19:47.38:0,47,1078	0/1:3,23:27:1.36:143,0,1	0/0:14,0:14:2.70:0,3,13	0/0:14,0:13:38.78:0,39,340	0/0:29,0:29:78.23:0,78,1287	0/0:17,0:17:10.49:0,10,254	0/1:18,0:18:99:203,0,214	0/0:17,0:17:36.04:0,36,355	0/0:14,0:14:33.56:0,34,352	1/1:1,28:29:24.08:669,24,0	0/0:33,0:33:90.13:0,90,1805	0/0:31,0:30:89.97:0,90,1886	0/0:16,0:16:48.02:0,48,1259
chr10	5238121	.	CCTATCTAT	C	6059.04	PASS	AB=0.674;AC=31;AF=0.596;AN=52;BaseQRankSum=-4.787;DP=725;FS=6.481;HRun=0;HaplotypeScore=211.1131;InbreedingCoeff=0.8116;MQ=54.88;MQ0=9;MQRankSum=-7.126;QD=13.99;ReadPosRankSum=-2.450;VQSLOD=3.1431;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:16,22:37:2.65:190,0,3	1/1:7,4:11:12.04:294,12,0	./.	./.	1/1:24,23:48:29.66:362,30,0	1/1:15,4:19:18.04:357,18,0	1/1:6,8:14:4.12:59,4,0	0/0:29,0:25:9.42:0,9,92	1/1:11,0:30:17.65:289,18,0	1/1:20,20:40:63.20:1384,63,0	1/1:13,14:26:11.90:146,12,0	0/0:14,0:22:11.97:0,12,96	1/1:23,5:29:36.09:702,36,0	1/1:6,13:19:15.05:297,15,0	0/0:29,0:35:51.52:0,52,736	0/0:3,0:18:26.94:0,27,219	1/1:22,2:24:27.03:554,27,0	0/0:14,0:20:33.11:0,33,935	1/1:8,5:12:15.05:353,15,0	1/1:10,19:29:33.58:596,34,0	0/1:10,13:23:0.11:0,0,0	1/1:10,24:34:29.57:441,30,0	1/1:11,9:20:2.49:36,2,0	0/1:10,5:15:0:0,0,0	0/0:28,0:33:54.14:0,54,1272	0/0:24,0:43:22.99:0,23,1248	0/0:20,0:32:26.62:0,27,247	0/0:12,0:12:21.07:0,21,853
chr10	5239215	.	G	GATAAA	12859.65	PASS	AB=0.594;AC=13;AF=0.232;AN=56;BaseQRankSum=-10.448;DP=702;FS=11.717;HRun=0;HaplotypeScore=120.3274;InbreedingCoeff=0.8983;MQ=81.37;MQ0=0;MQRankSum=-7.079;QD=74.33;ReadPosRankSum=-2.107;VQSLOD=5.5998;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,23:26:66.23:1907,66,0	0/0:11,0:11:33.11:0,33,693	0/0:17,0:17:39.12:0,39,779	0/0:23,0:23:52.40:0,52,944	0/0:23,0:23:60.21:0,60,1259	0/0:25,0:25:64.49:0,64,1378	0/0:20,0:20:54.17:0,54,1075	1/1:13,16:31:78.23:2201,78,0	0/0:32,0:32:96.33:0,96,2015	0/0:36,0:36:99:0,102,2095	0/0:32,0:32:90.29:0,90,1850	0/0:27,0:27:78.27:0,78,1623	0/0:28,0:28:72.25:0,72,1497	0/0:23,0:23:63.20:0,63,1280	1/1:4,30:35:96.33:2901,96,0	1/1:2,16:20:48.16:1438,48,0	0/1:6,13:19:17.80:1209,0,18	1/1:1,5:6:15.05:439,15,0	0/0:12,0:12:36.12:0,36,756	0/0:29,0:29:84.29:0,84,1751	0/0:34,0:34:99:0,99,2032	0/0:23,0:23:63.22:0,63,1302	0/0:27,0:27:63.22:0,63,1318	0/0:27,0:26:81.28:0,81,1701	1/1:5,31:36:96.29:2764,96,0	0/0:36,0:36:99:0,102,2088	0/0:28,0:27:78.27:0,78,1636	0/0:16,0:16:48.16:0,48,973
chr10	5239480	.	C	CAG	243.87	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-1.003;DP=712;FS=1.162;HRun=0;HaplotypeScore=96.4875;InbreedingCoeff=0.8734;MQ=72.65;MQ0=18;MQRankSum=0.768;QD=12.19;ReadPosRankSum=0.104;VQSLOD=2.9066;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:53.91:0,54,836	0/0:7,0:7:15.05:0,15,180	0/0:72,0:28:25.25:0,25,309	0/0:81,0:19:6.14:0,6,89	0/0:21,0:21:42.13:0,42,502	0/0:26,0:26:66.16:0,66,755	0/0:18,0:18:45.14:0,45,539	0/0:24,0:24:42.11:0,42,482	0/0:17,0:17:45.14:0,45,539	0/0:17,0:17:39.12:0,39,464	0/0:24,0:24:54.16:0,54,647	0/0:16,0:16:30.08:0,30,348	0/0:12,0:12:24.07:0,24,282	0/0:23,0:24:44.97:0,45,516	0/0:24,0:24:48.15:0,48,575	1/1:8,12:20:21.07:336,21,0	0/0:35,0:35:80.35:0,80,929	0/0:21,0:21:57.06:0,57,632	0/0:19,0:19:30.09:0,30,360	0/0:22,0:22:42.13:0,42,503	0/0:27,0:27:48.09:0,48,543	0/0:11,0:11:15.03:0,15,168	0/0:13,0:15:29.92:0,30,331	0/0:27,0:27:59.66:0,60,669	0/0:23,0:23:48.14:0,48,571	0/0:32,0:32:63.19:0,63,755	0/0:17,0:17:42.10:0,42,479	0/0:15,0:17:41.96:0,42,479
chr10	5240288	.	G	GTGC	1276.30	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-5.964;DP=639;FS=7.553;HRun=0;HaplotypeScore=91.0152;InbreedingCoeff=0.9696;MQ=82.48;MQ0=1;MQRankSum=-0.819;QD=42.54;ReadPosRankSum=2.156;VQSLOD=4.6778;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:93.29:0,93,1447	0/0:13,0:13:39.13:0,39,626	0/0:17,0:17:33.11:0,33,509	0/0:20,0:20:45.12:0,45,669	0/0:16,0:16:36.12:0,36,561	0/0:16,0:16:45.15:0,45,723	0/0:22,0:22:60.20:0,60,964	0/0:32,0:32:90.29:0,90,1396	0/0:27,0:27:78.22:0,78,1203	0/0:18,0:18:45.15:0,45,717	0/0:17,0:17:48.16:0,48,770	0/0:39,0:39:99:0,102,1604	0/0:34,0:34:96.31:0,96,1511	0/0:24,0:24:66.23:0,66,1060	0/0:24,0:24:69.22:0,69,1083	1/1:3,26:30:63.22:1371,63,0	0/0:37,0:36:99:0,105,1659	0/0:40,0:40:99:0,111,1749	0/0:25,0:25:60.20:0,60,964	0/0:18,0:18:48.13:0,48,724	0/0:33,0:33:96.31:0,96,1504	0/0:13,0:13:36.12:0,36,561	0/0:19,0:19:54.18:0,54,863	0/0:24,0:24:72.23:0,72,1133	0/0:13,0:13:39.12:0,39,601	0/0:17,0:17:48.14:0,48,743	0/0:15,0:15:42.14:0,42,673	0/0:4,0:4:12.04:0,12,193
chr10	5242631	.	T	TTG	3826.79	PASS	AB=0.708;AC=12;AF=0.214;AN=56;BaseQRankSum=-5.759;DP=817;FS=0.000;HRun=0;HaplotypeScore=114.7295;InbreedingCoeff=0.5676;MQ=64.99;MQ0=8;MQRankSum=-0.266;QD=14.50;ReadPosRankSum=0.783;VQSLOD=3.5996;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:40,0:46:17.99:156,18,0	0/0:12,0:13:26.91:0,27,294	0/0:37,0:18:9.84:0,10,67	0/0:38,0:19:5.10:0,5,44	0/0:15,0:16:38.93:0,39,422	0/0:26,0:27:50.97:0,51,564	0/0:31,0:32:53.99:0,54,609	1/1:33,0:29:12.02:128,12,0	0/0:27,0:27:63.19:0,63,735	0/1:20,2:27:31.74:32,0,498	0/0:16,0:16:30.08:0,30,339	0/0:31,0:31:72.20:0,72,827	0/0:29,1:32:18.83:0,19,635	0/0:33,0:34:69.02:0,69,774	0/1:21,28:51:99:1185,0,108	1/1:4,20:26:8.06:750,8,0	1/1:13,1:37:63:573,63,0	0/1:10,14:24:24.82:566,0,25	0/0:21,0:21:39.11:0,39,455	0/0:27,0:27:51.13:0,51,575	0/0:22,0:28:61.90:0,62,598	0/0:29,0:32:28.85:0,29,519	0/0:25,0:25:39.11:0,39,454	0/0:37,0:40:89.76:0,90,987	0/1:8,11:19:1.89:437,0,2	0/0:30,0:31:66.01:0,66,733	0/0:34,1:35:37.24:0,37,886	0/0:11,0:11:12.04:0,12,140
chr10	5243521	.	CT	C	593.07	PASS	AB=0.946;AC=8;AF=0.143;AN=56;BaseQRankSum=1.925;DP=587;FS=0.000;HRun=14;HaplotypeScore=75.7211;InbreedingCoeff=0.3547;MQ=62.14;MQ0=5;MQRankSum=0.718;QD=3.55;ReadPosRankSum=1.243;VQSLOD=0.4131;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:17,25:42:28.75:425,29,0	0/0:4,0:4:6.01:0,6,56	0/1:16,0:8:5.40:5,0,62	0/0:8,0:5:8.01:0,8,36	0/0:22,1:23:6.51:0,7,318	0/0:17,1:19:12.25:0,12,237	0/0:23,1:24:52.35:0,52,435	1/1:16,17:31:41.34:260,41,0	0/0:12,0:12:29.94:0,30,258	0/0:25,0:25:47.89:0,48,432	0/1:11,2:14:11.86:12,0,157	0/1:26,0:27:11.15:11,0,191	0/0:12,0:14:23.52:0,24,194	0/0:9,0:10:7.68:0,8,83	0/0:25,1:26:34.13:0,34,420	0/0:6,0:13:10.80:0,11,76	0/0:31,1:32:30.89:0,31,557	0/0:27,0:28:46.64:0,47,414	0/0:24,2:26:14.54:0,15,355	0/0:21,0:21:44.41:0,44,389	0/0:21,0:21:40.80:0,41,345	0/0:9,0:23:31.88:0,32,189	0/0:12,2:15:3.89:0,4,165	0/1:31,2:33:20.67:21,0,355	0/0:16,0:16:25.51:0,26,214	0/0:19,1:25:32.06:0,32,256	0/0:18,0:18:38.05:0,38,332	0/0:12,0:12:24.33:0,24,208
chr10	5243865	.	A	ATGCGTGCG	792.71	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=0.661;DP=708;FS=2.921;HRun=0;HaplotypeScore=171.8969;InbreedingCoeff=0.9838;MQ=69.88;MQ0=0;MQRankSum=-3.130;QD=24.02;ReadPosRankSum=0.621;VQSLOD=3.4582;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,120,2498	0/0:12,0:12:27.04:0,27,652	0/0:30,0:28:31.96:0,32,693	0/0:24,0:21:35.13:0,35,704	0/0:25,0:25:48.13:0,48,1064	0/0:19,0:19:45.13:0,45,1070	0/0:17,0:17:39.08:0,39,777	0/0:24,0:24:48.13:0,48,955	0/0:29,0:29:69.02:0,69,1406	0/0:24,0:24:60.17:0,60,1372	0/0:8,0:8:18.01:0,18,310	0/0:26,0:26:66.20:0,66,1603	0/0:23,0:23:48.15:0,48,1211	0/0:30,0:30:84.24:0,84,1945	0/0:29,0:29:75.21:0,75,1762	0/0:31,0:31:69.08:0,69,1275	1/1:9,17:33:21.07:885,21,0	0/0:23,0:23:60.13:0,60,1315	0/0:30,0:30:72.05:0,72,1383	0/0:15,0:15:30.09:0,30,666	0/0:52,0:51:99:0,129,2832	0/0:21,0:21:51.10:0,51,1155	0/0:16,0:16:39.10:0,39,918	0/0:38,0:38:87.18:0,87,1800	0/0:25,0:25:57.14:0,57,1160	0/0:23,0:23:45.12:0,45,911	0/0:21,0:21:51.12:0,51,1127	0/0:9,0:9:24.03:0,24,468
chr10	5246595	.	CGT	C	807.71	PASS	AB=0.895;AC=21;AF=0.389;AN=54;BaseQRankSum=7.340;DP=666;FS=5.549;HRun=0;HaplotypeScore=94.9407;InbreedingCoeff=-0.1549;MQ=68.65;MQ0=10;MQRankSum=0.929;QD=2.13;ReadPosRankSum=2.577;VQSLOD=1.3764;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:47:7.39:0,7,48	0/1:8,1:9:15.02:15,0,182	0/1:32,0:25:0.81:1,0,39	./.	0/1:15,1:17:20.15:20,0,222	0/1:17,0:17:7.69:8,0,132	0/1:30,2:32:38.15:38,0,360	0/0:24,0:22:8.91:0,9,61	0/0:17,0:17:16.02:0,16,365	0/1:24,0:24:23.51:24,0,180	0/0:6,0:5:6:0,6,69	0/0:21,0:23:30.94:0,31,494	0/0:17,0:17:21.07:0,21,315	0/1:13,4:18:26.16:26,0,162	0/1:18,14:32:14.98:267,0,15	1/1:15,0:30:34.09:167,34,0	0/0:28,0:45:30.47:0,30,279	1/1:6,6:12:11.65:113,12,0	0/1:18,0:18:17.97:18,0,114	0/1:15,1:15:15.01:15,0,182	0/0:46,2:49:23.99:0,24,590	0/1:16,1:18:17.09:17,0,290	0/1:8,2:10:44:54,0,44	0/1:43,6:50:14.13:14,0,678	1/1:7,8:17:14.87:146,15,0	0/0:24,0:24:24.51:0,25,303	0/1:14,2:16:9.02:9,0,247	0/1:7,3:8:21.63:22,0,56
chr10	5246702	.	GCAAA	G	644.50	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.523;DP=652;FS=0.974;HRun=0;HaplotypeScore=104.8311;InbreedingCoeff=0.8914;MQ=67.89;MQ0=1;MQRankSum=-1.803;QD=26.85;ReadPosRankSum=-2.891;VQSLOD=3.1248;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:90.25:0,90,2082	0/0:11,0:11:21.07:0,21,494	0/0:27,0:26:54.10:0,54,1121	0/0:29,0:25:51.03:0,51,1015	0/0:18,0:18:45.15:0,45,1083	0/0:16,0:16:36.11:0,36,789	0/0:29,0:29:66.21:0,66,1505	1/1:8,16:24:45.15:739,45,0	0/0:28,0:28:69.24:0,69,1617	0/0:26,0:26:63.21:0,63,1491	0/0:10,0:10:24.08:0,24,595	0/0:21,0:21:60.19:0,60,1432	0/0:20,0:20:60.19:0,60,1389	0/0:17,0:17:51.18:0,51,1249	0/0:26,0:26:75.24:0,75,1765	0/0:27,0:27:72.25:0,72,1783	0/0:35,0:34:90.20:0,90,2023	0/0:25,0:25:68.23:0,68,1531	0/0:17,0:16:36.10:0,36,730	0/0:19,0:19:48.16:0,48,1134	0/0:50,0:50:99:0,138,3303	0/0:25,0:25:66.22:0,66,1573	0/0:16,0:16:33.09:0,33,691	0/0:26,1:27:16.88:0,17,1225	0/0:28,0:28:69.22:0,69,1651	0/0:18,0:18:45.15:0,45,1103	0/0:25,0:25:63.21:0,63,1418	0/0:4,0:4:6.02:0,6,149
chr10	5248142	.	AGG	A	327.85	PASS	AB=0.625;AC=11;AF=0.500;AN=22;BaseQRankSum=0.675;DP=63;FS=28.156;HRun=5;HaplotypeScore=44.7329;InbreedingCoeff=0.5189;MQ=102.18;MQ0=2;MQRankSum=-3.242;QD=12.61;ReadPosRankSum=2.236;VQSLOD=-0.6452;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,4:7:11.24:70,11,0	./.	0/0:13,0:6:13.32:0,13,96	0/0:14,0:13:10.22:0,10,165	./.	./.	./.	1/1:2,0:2:3:30,3,0	./.	./.	./.	./.	./.	./.	1/1:1,3:4:11.82:79,12,0	1/1:1,1:4:11.98:110,12,0	1/1:1,0:4:8.75:52,9,0	0/1:2,3:5:15.79:94,0,16	0/0:2,0:2:3.01:0,3,55	0/0:2,0:2:6.01:0,6,72	./.	./.	0/0:1,0:1:0:0,0,0	./.	./.	./.	./.	./.
chr10	5248577	.	GGT	G	271.29	PASS	AB=0.940;AC=17;AF=0.327;AN=52;BaseQRankSum=4.190;DP=630;FS=9.579;HRun=0;HaplotypeScore=100.8958;InbreedingCoeff=-0.1508;MQ=69.84;MQ0=12;MQRankSum=-0.613;QD=0.75;ReadPosRankSum=2.979;VQSLOD=1.2731;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,1:27:2.56:0,3,20	0/0:12,0:12:5.98:0,6,64	./.	./.	0/1:18,2:20:46.93:47,0,158	0/1:20,4:22:47.01:47,0,129	0/1:35,3:37:87.69:88,0,325	0/0:20,0:19:11.72:0,12,71	0/0:24,0:24:12.68:0,13,384	0/0:21,0:22:8.18:0,8,206	0/0:11,1:12:12.02:0,12,155	0/1:17,0:20:13.26:13,0,99	0/0:10,0:10:6:0,6,66	0/1:24,0:24:11.47:11,0,225	1/1:10,0:16:5.68:28,6,0	1/1:16,0:15:1.57:3,2,0	0/0:23,0:23:5.92:0,6,39	1/1:12,0:13:2.69:8,3,0	0/1:16,0:17:5.19:5,0,59	0/0:10,0:10:3.01:0,3,45	0/1:72,2:70:64.02:64,0,330	0/0:12,0:12:12.01:0,12,137	0/1:16,0:16:7.71:8,0,241	0/1:40,1:43:29.32:29,0,594	0/0:11,0:13:2.87:0,3,16	0/1:21,0:22:1.16:1,0,217	0/0:11,0:10:7.18:0,7,87	0/1:15,1:17:57.05:57,0,71
chr10	5248623	.	CGCGTGCGCGCAT	C	713.03	PASS	AB=1.000;AC=8;AF=0.143;AN=56;BaseQRankSum=6.716;DP=591;FS=0.000;HRun=0;HaplotypeScore=181.6827;InbreedingCoeff=0.2895;MQ=48.32;MQ0=24;MQRankSum=-5.759;QD=8.59;ReadPosRankSum=-0.613;VQSLOD=2.4072;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:16,5:20:1.63:0,2,16	0/0:3,0:3:6.02:0,6,236	0/0:27,0:6:18.01:0,18,456	0/0:40,0:2:6.02:0,6,180	0/0:22,0:21:54.19:0,54,2343	0/0:14,0:14:29.78:0,30,1093	0/0:34,0:33:65.55:0,66,2933	1/1:5,8:12:25.25:300,25,0	0/0:23,0:23:56.58:0,57,3032	0/0:28,0:27:68.79:0,69,3112	0/0:10,0:10:21.07:0,21,1057	0/0:17,0:17:30.99:0,31,1386	0/0:16,0:16:33.11:0,33,1442	0/0:19,0:19:54.17:0,54,2365	0/1:9,0:9:29.51:38,0,30	0/1:13,0:13:99:142,0,450	0/1:17,0:16:35.20:35,0,323	0/1:15,0:15:99:249,0,326	0/0:12,0:10:27.07:0,27,1332	0/0:8,0:8:21.07:0,21,962	0/0:84,0:79:99:0,171,7623	0/0:21,0:21:57.20:0,57,2502	0/0:18,0:18:36.14:0,36,1801	0/0:42,0:42:99:0,111,4943	1/1:16,0:16:3.48:88,3,0	0/0:23,0:22:61.23:0,61,2453	0/0:15,0:14:38.94:0,39,1570	0/0:11,0:11:33.11:0,33,1481
chr10	5248634	.	ATGTGTGTGTGCGTGTGTGCGTGTG	A	856.92	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=3.884;DP=602;FS=6.542;HRun=0;HaplotypeScore=301.0006;InbreedingCoeff=0.6596;MQ=49.99;MQ0=17;MQRankSum=-4.278;QD=14.52;ReadPosRankSum=1.266;VQSLOD=1.5764;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:18:5.89:0,6,62	0/0:2,0:2:3.01:0,3,146	0/0:32,0:8:24.07:0,24,842	0/0:46,0:4:12.04:0,12,591	0/0:21,0:20:45.15:0,45,3658	0/0:11,0:11:21.96:0,22,1422	0/0:33,0:32:66.23:0,66,4267	0/0:12,0:11:3.01:0,3,49	0/0:25,0:25:69.02:0,69,5132	0/0:24,0:24:63.04:0,63,4839	0/0:10,0:10:27.09:0,27,2067	0/0:19,0:19:44.18:0,44,2934	0/0:16,0:16:33.11:0,33,2676	0/0:21,0:21:54.17:0,54,3646	1/1:8,1:9:2.38:191,2,0	0/0:12,0:12:21.07:0,21,1092	1/1:17,0:17:0.47:47,0,0	1/1:8,8:16:8.56:565,9,0	0/0:14,0:14:39.13:0,39,2557	0/0:9,0:9:24.08:0,24,1550	0/0:89,0:87:99:0,189,14943	0/0:22,0:22:57.20:0,57,4386	0/0:15,0:15:39.13:0,39,3270	0/0:42,0:42:90.09:0,90,7436	1/1:5,12:17:3.01:176,3,0	0/0:22,0:22:57.20:0,57,4073	0/0:14,0:14:33.11:0,33,2833	0/0:12,0:12:33.11:0,33,1859
chr10	5248647	.	TGTGTGC	T	212.65	PASS	AB=0.917;AC=7;AF=0.125;AN=56;BaseQRankSum=5.084;DP=593;FS=0.000;HRun=0;HaplotypeScore=135.5411;InbreedingCoeff=0.3742;MQ=54.08;MQ0=13;MQRankSum=-3.426;QD=2.47;ReadPosRankSum=-0.583;VQSLOD=2.4856;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:4.49:0,4,23	0/0:2,0:2:5.98:0,6,55	0/0:40,0:15:38.13:0,38,794	0/1:46,0:8:11.21:11,0,392	0/0:18,0:18:46.70:0,47,1486	0/0:11,0:11:20.81:0,21,543	0/0:33,0:33:80.48:0,80,2039	0/1:8,4:12:14.09:153,0,14	0/0:28,0:28:53.82:0,54,1863	0/0:24,0:24:72.12:0,72,1983	0/0:10,0:10:24.08:0,24,790	0/0:19,0:19:45.58:0,46,1392	0/0:13,0:13:35.91:0,36,1065	0/0:22,0:22:63.17:0,63,1860	0/1:7,0:7:32.89:33,0,66	0/0:13,0:13:24.08:0,24,579	0/0:12,0:12:14.38:0,14,101	1/1:8,0:8:9.03:116,9,0	0/0:18,0:17:44.65:0,45,1063	0/0:9,0:9:27.02:0,27,663	0/0:83,0:83:99:0,203,6418	0/0:25,0:25:72.13:0,72,2150	0/0:14,0:14:42.10:0,42,1153	0/0:39,0:39:99:0,102,3065	1/1:12,0:12:3:26,3,0	0/0:23,0:23:63.06:0,63,1659	0/0:15,0:15:45.10:0,45,1351	0/0:12,0:12:32.87:0,33,632
chr10	5248649	.	TGTGC	T	46.03	PASS	AB=0.890;AC=8;AF=0.143;AN=56;BaseQRankSum=6.214;DP=601;FS=0.000;HRun=0;HaplotypeScore=119.1885;InbreedingCoeff=0.3153;MQ=54.51;MQ0=12;MQRankSum=-2.643;QD=0.43;ReadPosRankSum=-1.154;VQSLOD=2.2149;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:5,18:23:10.70:11,0,12	0/0:2,0:2:5.98:0,6,59	0/0:39,0:15:30.42:0,30,583	0/1:44,0:9:14.62:15,0,380	0/0:19,0:19:34.51:0,35,1140	0/0:12,0:12:23.69:0,24,461	0/0:34,0:34:84.67:0,85,1673	0/1:12,0:12:45.78:46,0,55	0/0:27,0:27:53.64:0,54,1370	0/0:24,0:24:72.13:0,72,1623	0/0:10,0:10:24.08:0,24,598	0/0:19,0:19:45.58:0,46,1111	0/0:14,0:14:38.92:0,39,897	0/0:23,0:23:66.13:0,66,1451	0/1:8,0:8:18.93:19,0,53	0/0:13,0:13:27.02:0,27,465	0/0:16,0:16:14.63:0,15,89	1/1:8,0:8:8.99:74,9,0	0/0:19,0:18:47.66:0,48,883	0/0:9,0:9:27.02:0,27,505	0/0:82,0:82:99:0,203,4908	0/0:24,0:24:72.04:0,72,1655	0/0:14,0:14:41.99:0,42,849	0/0:43,0:43:99:0,114,2529	1/1:12,0:12:2.74:12,3,0	0/0:23,0:23:63.06:0,63,1337	0/0:16,0:16:48.11:0,48,1122	0/0:12,0:12:32.87:0,33,523
chr10	5248653	.	C	CGT	544.08	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=3.506;DP=598;FS=14.367;HRun=0;HaplotypeScore=99.9065;InbreedingCoeff=0.7351;MQ=56.87;MQ0=10;MQRankSum=-1.489;QD=12.65;ReadPosRankSum=-1.758;VQSLOD=2.1516;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:20:5:28,5,0	0/0:2,0:2:3.01:0,3,35	0/0:40,0:18:23.03:0,23,314	0/0:41,0:12:12.81:0,13,218	0/0:19,0:19:48.15:0,48,586	0/0:12,0:12:3.09:0,3,225	0/0:35,0:36:69.47:0,69,798	1/1:7,2:9:15.02:206,15,0	0/0:25,0:27:53.53:0,54,613	0/0:24,0:24:60.15:0,60,721	0/0:10,0:10:21.05:0,21,246	0/0:20,0:20:38.74:0,39,479	0/0:15,0:15:33.10:0,33,406	0/0:23,0:24:60:0,60,694	0/0:8,0:8:8.86:0,9,86	1/1:0,13:14:27.09:440,27,0	0/0:16,0:16:14.98:0,15,126	0/0:8,0:8:8.79:0,9,52	0/0:20,0:19:33.09:0,33,395	0/0:8,0:8:18.06:0,18,221	0/0:77,0:78:99:0,183,2210	0/0:24,0:26:65.85:0,66,747	0/0:14,0:15:35.93:0,36,404	0/0:37,0:41:99:0,105,1228	0/0:12,0:12:3:0,3,29	0/0:23,0:23:30.25:0,30,622	0/0:16,0:16:45.14:0,45,552	0/0:12,0:12:15.05:0,15,184
chr10	5249137	.	TAC	T	1242.57	PASS	AC=6;AF=0.111;AN=54;BaseQRankSum=7.343;DP=657;FS=2.775;HRun=0;HaplotypeScore=91.0038;InbreedingCoeff=0.8664;MQ=67.35;MQ0=2;MQRankSum=-0.063;QD=22.59;ReadPosRankSum=2.530;VQSLOD=4.4119;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,102,1682	0/0:9,0:9:24.07:0,24,379	0/0:38,1:31:19.32:0,19,765	0/0:45,0:32:61.96:0,62,911	0/0:15,1:16:6.56:0,7,669	0/0:23,0:23:63.21:0,63,1046	0/0:36,2:38:4.09:0,4,1178	0/0:31,0:30:69.21:0,69,1079	0/0:18,0:18:45.14:0,45,730	0/0:29,1:30:33.62:0,34,1089	0/0:15,0:15:39.12:0,39,632	0/0:29,0:29:78.27:0,78,1303	0/0:23,0:23:63.18:0,63,1008	0/0:24,0:24:54.18:0,54,910	1/1:4,18:22:42.09:521,42,0	0/0:15,1:16:3.54:0,4,615	./.	1/1:3,15:18:39.02:479,39,0	0/0:20,0:20:45.15:0,45,725	0/0:13,0:13:36.12:0,36,607	0/0:42,0:42:91.81:0,92,1441	0/0:26,0:26:66.21:0,66,1063	0/0:28,0:28:75.24:0,75,1230	0/0:30,0:30:57.18:0,57,924	1/1:0,15:15:30.10:383,30,0	0/0:17,0:17:45.15:0,45,747	0/0:19,0:19:54.18:0,54,893	0/0:9,0:9:21.07:0,21,329
chr10	5249614	.	ACCAACCAG	A	420.07	PASS	AC=2;AF=0.040;AN=50;BaseQRankSum=4.198;DP=672;FS=10.209;HRun=0;HaplotypeScore=158.0195;InbreedingCoeff=0.8612;MQ=52.80;MQ0=27;MQRankSum=-3.648;QD=15.56;ReadPosRankSum=1.345;VQSLOD=2.4645;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:43:69.13:0,69,1797	0/0:10,0:10:21.06:0,21,534	./.	./.	0/0:25,0:25:24.03:0,24,646	0/0:18,0:18:39.13:0,39,1052	0/0:36,0:35:50.03:0,50,1440	0/0:39,0:38:27.13:0,27,817	0/0:26,0:25:42.12:0,42,1689	0/0:27,0:26:54.16:0,54,1667	0/0:15,0:14:24.08:0,24,674	0/0:28,0:28:54.09:0,54,1384	0/0:21,0:21:39.06:0,39,960	0/0:24,0:24:54.18:0,54,1749	0/0:19,0:35:28.96:0,29,297	1/1:6,21:27:21.07:511,21,0	./.	0/0:24,0:23:36.08:0,36,592	0/0:22,0:15:15.05:0,15,420	0/0:17,0:16:29.81:0,30,663	0/0:40,0:39:84.27:0,84,2550	0/0:24,0:23:24.01:0,24,637	0/0:19,0:19:27.08:0,27,813	0/0:27,0:27:54.17:0,54,1654	0/0:20,0:20:5.25:0,5,117	0/0:27,0:27:45.05:0,45,1265	0/0:15,0:15:30.10:0,30,789	0/0:11,0:11:21.07:0,21,654
chr10	5249642	.	A	ACCAG	380.49	PASS	AB=0.893;AC=3;AF=0.056;AN=54;BaseQRankSum=5.570;DP=631;FS=12.823;HRun=0;HaplotypeScore=109.9877;InbreedingCoeff=-0.0635;MQ=52.96;MQ0=25;MQRankSum=-4.970;QD=6.24;ReadPosRankSum=-0.242;VQSLOD=0.9452;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:39:93.14:0,93,1505	0/0:13,0:13:30.07:0,30,462	0/0:29,0:6:18.03:0,18,248	0/0:23,0:2:6:0,6,57	0/0:14,0:14:25.38:0,25,433	0/0:22,0:21:63.19:0,63,1106	0/0:24,0:23:66.08:0,66,956	0/0:32,0:30:87.16:0,87,1351	0/0:26,0:24:69.17:0,69,1178	0/0:27,0:26:75.22:0,75,1259	0/0:13,0:13:26.12:0,26,543	0/0:33,0:33:84.20:0,84,1424	0/0:23,0:23:57.12:0,57,939	0/0:25,0:25:69.22:0,69,1229	0/1:24,0:24:99:205,0,272	0/0:32,0:32:48.60:0,49,704	./.	0/1:20,0:19:99:229,0,102	0/0:21,0:13:36.08:0,36,577	0/0:12,0:12:30.09:0,30,537	0/0:46,0:46:99:0,129,2236	0/0:17,0:16:36.11:0,36,614	0/0:21,0:20:44.58:0,45,740	0/0:32,0:32:93.26:0,93,1617	0/1:9,7:17:46.22:46,0,229	0/0:20,0:20:58.02:0,58,925	0/0:13,0:13:39.07:0,39,564	0/0:12,0:12:27.09:0,27,511
chr10	5249740	.	C	CAACT	708.59	PASS	AB=0.856;AC=6;AF=0.115;AN=52;BaseQRankSum=4.028;DP=802;FS=0.703;HRun=0;HaplotypeScore=143.7827;InbreedingCoeff=-0.1393;MQ=51.16;MQ0=50;MQRankSum=-3.024;QD=3.49;ReadPosRankSum=-0.899;VQSLOD=2.2322;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:6,32:38:91.94:315,0,92	0/0:11,0:11:27.03:0,27,364	./.	0/0:21,0:3:3.01:0,3,54	0/0:29,0:28:62.98:0,63,955	0/0:25,0:25:60.09:0,60,914	0/0:29,0:26:69.16:0,69,1159	0/1:40,0:24:53.84:54,0,405	0/0:32,0:31:78.23:0,78,1360	0/0:40,0:38:99:0,108,1733	0/0:12,0:10:23.10:0,23,359	0/0:30,0:28:72.19:0,72,1175	0/0:27,0:27:63.01:0,63,938	0/0:22,0:22:60.10:0,60,943	0/1:39,0:32:99:221,0,497	0/1:11,17:33:53.80:54,0,208	./.	0/1:24,0:21:99:109,0,203	0/0:19,0:6:18.01:0,18,240	0/0:22,0:22:66.03:0,66,1033	0/0:81,0:76:99:0,211,3359	0/0:26,0:25:50.84:0,51,756	0/0:16,0:16:35.42:0,35,502	0/0:51,0:49:99:0,133,2259	0/1:25,0:21:77.63:78,0,287	0/0:37,0:35:99:0,102,1653	0/0:26,0:26:75.23:0,75,1336	0/0:12,0:12:30.09:0,30,527
chr10	5249862	.	A	AC	668.93	PASS	AC=2;AF=0.037;AN=54;BaseQRankSum=4.498;DP=715;FS=0.754;HRun=1;HaplotypeScore=88.1121;InbreedingCoeff=0.8882;MQ=56.35;MQ0=6;MQRankSum=-3.207;QD=25.73;ReadPosRankSum=0.735;VQSLOD=3.5369;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,24:23:49.46:763,49,0	0/0:11,0:11:27.03:0,27,313	0/0:24,0:13:22.11:0,22,302	0/0:17,0:9:20.98:0,21,203	0/0:21,0:20:36.10:0,36,466	0/0:23,0:23:60.19:0,60,778	0/0:29,1:29:84.27:0,84,1090	0/0:25,0:24:72.22:0,72,914	0/0:24,6:28:69.21:0,69,876	0/0:26,0:26:63.20:0,63,807	0/0:13,0:13:26.99:0,27,311	0/0:30,0:30:81.24:0,81,1020	0/0:34,0:34:71.33:0,71,1138	0/0:30,0:29:75.23:0,75,952	0/0:31,1:28:66.21:0,66,856	0/0:26,0:26:69.19:0,69,865	./.	0/0:28,1:26:9.26:0,9,794	0/0:24,0:23:60.15:0,60,747	0/0:14,0:13:32.88:0,33,370	0/0:94,0:92:99:0,250,3236	0/0:19,0:19:9.22:0,9,490	0/0:21,0:21:51.15:0,51,648	0/0:44,2:45:78.66:0,79,1491	0/0:15,0:14:33.09:0,33,411	0/0:29,0:29:81.18:0,81,970	0/0:15,0:15:42.12:0,42,523	0/0:10,0:9:21.07:0,21,272
chr10	5249887	.	TAACC	T	952.72	PASS	AB=0.941;AC=7;AF=0.135;AN=52;BaseQRankSum=3.599;DP=690;FS=6.159;HRun=0;HaplotypeScore=114.8513;InbreedingCoeff=0.5049;MQ=54.48;MQ0=25;MQRankSum=1.896;QD=6.90;ReadPosRankSum=-0.769;VQSLOD=2.1192;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:24:0.49:0,0,104	0/0:10,0:10:17.99:0,18,357	./.	0/0:12,0:5:0:0,0,0	0/0:21,0:20:30.10:0,30,537	0/0:19,0:19:30.09:0,30,503	0/0:33,1:33:14.99:0,15,982	0/0:36,0:22:14.84:0,15,106	0/0:24,0:22:30.07:0,30,611	0/0:20,0:19:23.02:0,23,307	0/0:13,0:13:15.05:0,15,336	0/0:22,0:22:36.12:0,36,740	0/0:35,0:34:57.17:0,57,1129	0/0:23,0:22:35.78:0,36,661	1/1:17,16:28:8.92:144,9,0	0/1:8,0:25:24.15:24,0,116	./.	1/1:30,8:35:59.87:830,60,0	0/0:27,0:18:20.06:0,20,350	0/0:17,0:16:16.23:0,16,257	0/0:84,0:82:99:0,141,2684	0/0:22,0:21:23.98:0,24,389	0/0:16,0:16:21.06:0,21,404	0/0:52,0:51:99:0,111,2063	0/1:11,3:13:22.26:82,0,22	0/0:28,0:28:39.12:0,39,755	0/0:19,0:19:34.86:0,35,669	0/0:7,0:4:9.03:0,9,160
chr10	5250139	.	T	TTG	491.88	PASS	AB=1.000;AC=3;AF=0.056;AN=54;BaseQRankSum=3.900;DP=548;FS=9.034;HRun=0;HaplotypeScore=95.6673;InbreedingCoeff=0.6045;MQ=71.75;MQ0=7;MQRankSum=-1.730;QD=7.69;ReadPosRankSum=-0.466;VQSLOD=2.6088;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:11,17:30:25.61:518,26,0	0/0:10,0:10:29.98:0,30,315	0/0:35,0:19:40.85:0,41,479	0/0:13,0:7:7.33:0,7,70	0/0:23,0:22:58.05:0,58,699	0/0:19,0:19:40.65:0,41,518	0/0:16,0:15:28.91:0,29,394	0/1:34,0:34:78.82:79,0,166	0/0:24,0:23:63.17:0,63,835	0/0:23,0:22:62.92:0,63,738	0/0:11,0:11:30.69:0,31,371	0/0:17,0:17:47.69:0,48,481	0/0:10,0:10:21.06:0,21,295	0/0:12,0:12:26.95:0,27,344	0/0:14,0:14:35.92:0,36,364	0/0:21,0:21:40.42:0,40,635	./.	0/0:33,0:31:50.09:0,50,821	0/0:24,0:23:53.68:0,54,648	0/0:25,0:24:65.54:0,66,719	0/0:10,0:10:20.81:0,21,214	0/0:18,0:18:52.35:0,52,655	0/0:21,0:21:52.22:0,52,625	0/0:18,0:18:44.92:0,45,585	0/0:24,0:24:56.52:0,57,677	0/0:24,0:23:65.85:0,66,787	0/0:27,0:26:74.92:0,75,941	0/0:12,0:12:26.89:0,27,323
chr10	5251022	.	T	TAG	8276.16	PASS	AB=0.525;AC=11;AF=0.204;AN=54;BaseQRankSum=-14.467;DP=660;FS=3.460;HRun=0;HaplotypeScore=80.9277;InbreedingCoeff=0.8859;MQ=89.71;MQ0=0;MQRankSum=-3.792;QD=48.40;ReadPosRankSum=0.538;VQSLOD=5.6533;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,45:51:99:2409,129,0	0/0:13,0:13:39.13:0,39,569	0/0:22,0:22:48.10:0,48,624	0/0:28,0:28:72.21:0,72,1021	0/0:22,0:22:51.17:0,51,746	0/0:20,0:20:57.19:0,57,838	0/0:35,0:35:99:0,105,1520	1/1:3,24:28:81.26:1483,81,0	0/0:32,0:32:87.29:0,87,1281	0/0:26,0:26:72.24:0,72,1059	0/0:18,0:18:42.14:0,42,617	0/0:36,0:36:99:0,99,1437	0/0:22,0:22:63.21:0,63,928	0/0:22,0:22:57.18:0,57,820	1/1:3,29:33:78.27:1461,78,0	0/1:2,18:21:29.63:900,0,30	./.	1/1:0,19:19:54.19:1011,54,0	0/0:18,0:18:48.10:0,48,661	0/0:18,0:18:54.14:0,54,771	0/0:52,0:51:99:0,156,2249	0/0:19,0:19:51.16:0,51,731	0/0:14,0:14:42.14:0,42,619	0/0:23,0:23:60.18:0,60,859	1/1:0,19:19:54.19:1011,54,0	0/0:16,0:16:45.15:0,45,663	0/0:21,0:20:63.21:0,63,928	0/0:12,0:12:36.12:0,36,530
chr10	5251362	.	GA	G	1295.13	PASS	AC=6;AF=0.111;AN=54;BaseQRankSum=7.510;DP=518;FS=0.586;HRun=7;HaplotypeScore=51.2489;InbreedingCoeff=0.9886;MQ=84.04;MQ0=0;MQRankSum=-3.906;QD=23.55;ReadPosRankSum=2.594;VQSLOD=3.7723;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,105,1291	0/0:4,0:4:12.04:0,12,151	0/0:16,0:16:39.07:0,39,452	0/0:16,0:16:35.83:0,36,421	0/0:22,0:22:63.19:0,63,778	0/0:16,0:16:45.14:0,45,566	0/0:25,0:25:69.18:0,69,830	0/0:20,0:20:57.17:0,57,703	0/0:19,0:19:51.14:0,51,626	0/0:19,0:19:51.16:0,51,642	0/0:17,0:17:51.15:0,51,627	0/0:19,0:19:54.15:0,54,655	0/0:21,0:21:57.18:0,57,715	0/0:21,0:21:60.19:0,60,755	1/1:0,25:25:66.15:673,66,0	0/0:15,0:15:42.12:0,42,516	./.	1/1:1,17:18:42.09:428,42,0	0/0:16,0:16:42.13:0,42,528	0/0:14,0:14:36.11:0,36,451	0/0:37,0:37:99:0,102,1266	0/0:11,0:11:30.10:0,30,378	0/0:14,0:14:39.10:0,39,465	0/0:30,0:30:78.25:0,78,980	1/1:0,12:12:33.07:336,33,0	0/0:15,0:15:39.12:0,39,489	0/0:27,0:27:72.21:0,72,885	0/0:13,0:13:39.09:0,39,474
chr10	5251691	.	A	ACC	3085.40	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-5.305;DP=526;FS=3.204;HRun=1;HaplotypeScore=67.1098;InbreedingCoeff=0.9760;MQ=80.04;MQ0=0;MQRankSum=-0.644;QD=51.42;ReadPosRankSum=-1.217;VQSLOD=3.2399;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,25:26:75.21:1480,75,0	0/0:8,0:8:24.08:0,24,391	0/0:11,0:11:23.24:0,23,396	0/0:15,0:15:34:0,34,505	0/0:11,0:11:32.99:0,33,408	0/0:22,0:22:66.21:0,66,1052	0/0:34,0:34:99:0,99,1615	1/1:3,16:19:48.15:937,48,0	0/0:34,0:34:99:0,102,1637	0/0:18,0:18:51.17:0,51,812	0/0:11,0:11:33.11:0,33,538	0/0:18,0:18:54.18:0,54,881	0/0:22,0:22:63.18:0,63,978	0/0:22,0:22:66.23:0,66,1074	0/0:15,0:15:42.12:0,42,637	1/1:2,13:15:42.10:811,42,0	0/0:14,0:14:33.01:0,33,505	0/0:28,0:28:77.96:0,78,1235	0/0:21,0:21:63.20:0,63,1005	0/0:8,0:8:24.07:0,24,351	0/0:62,0:62:99:0,181,2861	0/0:10,0:10:30.10:0,30,489	0/0:3,0:3:9.03:0,9,147	0/0:30,0:30:84.26:0,84,1316	0/0:14,0:14:42.14:0,42,685	0/0:14,0:14:39.13:0,39,636	0/0:13,0:13:39.13:0,39,636	0/0:8,0:8:24.08:0,24,391
chr10	5252573	.	T	TGTGTGTGA	517.42	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=7.372;DP=840;FS=2.169;HRun=0;HaplotypeScore=233.2225;InbreedingCoeff=0.0172;MQ=60.39;MQ0=16;MQRankSum=-5.311;QD=3.14;ReadPosRankSum=2.131;VQSLOD=2.8141;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:13,29:51:0.47:1,0,0	0/0:11,0:11:23.72:0,24,264	0/0:40,0:21:29.21:0,29,319	0/0:40,0:14:23.17:0,23,279	0/0:22,0:22:48.20:0,48,1002	0/0:27,0:27:69.07:0,69,1286	0/0:44,0:44:99:0,104,2133	0/1:24,0:24:15.79:16,0,259	0/0:27,0:27:66:0,66,899	0/0:50,0:50:99:0,129,1871	0/0:16,0:16:36.51:0,37,541	0/0:36,0:36:83.83:0,84,1410	0/0:24,0:24:59.30:0,59,1071	0/0:20,0:20:54.06:0,54,947	0/1:23,0:22:99:237,0,141	0/1:23,0:23:93.04:93,0,137	0/0:40,0:39:59.23:0,59,798	0/1:27,0:27:99:250,0,220	0/0:26,0:24:64.36:0,64,677	0/0:13,0:13:34.01:0,34,462	0/0:70,0:70:99:0,156,2424	0/0:24,0:24:63.04:0,63,1052	0/0:28,0:28:57.99:0,58,1138	0/0:45,0:44:99:0,114,2118	0/1:17,0:16:38.11:38,0,154	0/0:35,0:35:95.94:0,96,1183	0/0:16,0:16:42.07:0,42,809	0/0:21,0:21:53.15:0,53,665
chr10	5252615	.	ATG	A	1768.70	PASS	AB=0.965;AC=9;AF=0.161;AN=56;BaseQRankSum=7.296;DP=842;FS=3.998;HRun=0;HaplotypeScore=131.5519;InbreedingCoeff=0.8652;MQ=59.34;MQ0=32;MQRankSum=0.497;QD=10.11;ReadPosRankSum=0.381;VQSLOD=3.3690;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:66.21:0,66,1102	0/0:6,0:6:12.04:0,12,203	0/0:72,0:28:64.40:0,64,943	0/1:79,2:24:12.73:13,0,412	0/0:24,0:24:57.67:0,58,949	0/0:30,0:30:75.26:0,75,1233	0/0:44,0:44:99:0,102,1631	0/0:17,0:17:45.15:0,45,751	0/0:24,0:24:60.21:0,60,1011	0/0:36,0:36:84.29:0,84,1407	0/0:17,0:17:42.14:0,42,707	0/0:30,0:30:84.29:0,84,1399	0/0:28,0:28:75.26:0,75,1257	0/0:24,0:24:66.23:0,66,1101	1/1:4,18:22:44.98:505,45,0	0/0:22,0:22:42.14:0,42,706	1/1:8,25:32:53.45:688,53,0	1/1:10,13:22:38.87:457,39,0	0/0:17,0:17:48.16:0,48,810	0/0:18,0:18:50.80:0,51,851	0/0:68,0:68:99:0,175,2886	0/0:26,0:26:65.95:0,66,1105	0/0:23,0:23:60.12:0,60,978	0/0:40,0:39:99:0,102,1714	1/1:4,9:13:20.99:270,21,0	0/0:25,0:25:66.23:0,66,1099	0/0:21,0:21:54.18:0,54,910	0/0:10,0:10:27.09:0,27,455
chr10	5252830	.	CTAGAAT	C	1220.92	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.830;DP=660;FS=0.000;HRun=0;HaplotypeScore=134.0684;InbreedingCoeff=0.9950;MQ=88.84;MQ0=0;MQRankSum=-4.576;QD=55.50;ReadPosRankSum=-3.488;VQSLOD=3.1413;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,148,5199	0/0:7,0:7:21.07:0,21,754	0/0:27,0:27:75.26:0,75,2338	0/0:24,0:25:75.25:0,75,2502	0/0:31,0:31:90.31:0,90,3200	0/0:14,0:14:39.12:0,39,1320	0/0:18,0:19:39.31:0,39,1824	1/1:1,21:22:63.11:1316,63,0	0/0:29,0:29:84.29:0,84,2990	0/0:41,0:41:99:0,117,4045	0/0:12,0:12:30.55:0,31,992	0/0:27,0:27:81.26:0,81,2819	0/0:29,0:29:84.27:0,84,2917	0/0:23,0:23:69.24:0,69,2483	0/0:22,0:22:60.21:0,60,2135	0/0:33,0:33:99:0,99,3557	0/0:23,0:23:66.20:0,66,2288	0/0:12,0:12:33.10:0,33,1045	0/0:23,0:23:63.21:0,63,2156	0/0:18,0:18:51.18:0,51,1793	0/0:29,0:29:81.25:0,81,2697	0/0:20,0:20:60.21:0,60,2030	0/0:16,0:16:48.16:0,48,1680	0/0:24,0:24:72.25:0,72,2553	0/0:22,0:22:63.22:0,63,2224	0/0:24,0:24:69.24:0,69,2460	0/0:23,0:23:69.22:0,69,2398	0/0:12,0:12:36.12:0,36,1295
chr10	5254995	.	CAG	C	944.64	PASS	AB=0.853;AC=16;AF=0.286;AN=56;BaseQRankSum=6.068;DP=637;FS=0.000;HRun=0;HaplotypeScore=99.9176;InbreedingCoeff=-0.0541;MQ=59.44;MQ0=15;MQRankSum=4.035;QD=3.46;ReadPosRankSum=2.356;VQSLOD=2.2106;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:39:26.70:0,27,160	0/0:10,0:9:15.05:0,15,232	0/0:31,0:17:2.68:0,3,12	0/0:59,0:23:16.35:0,16,183	0/1:15,2:17:1.90:2,0,399	0/1:25,2:27:21.85:22,0,594	0/1:18,5:24:48.04:48,0,387	0/0:31,0:27:42.32:0,42,358	0/1:22,1:24:7.01:7,0,522	0/0:18,1:19:7.12:0,7,550	0/1:8,1:10:28.39:28,0,214	0/1:14,1:15:25.07:25,0,244	0/0:29,0:30:43.04:0,43,811	0/1:16,6:22:33.85:34,0,415	0/0:22,0:20:5.91:0,6,43	0/0:27,0:26:8.92:0,9,85	0/0:18,0:17:8.98:0,9,83	0/0:8,0:6:8.12:0,8,52	0/1:14,1:15:10.89:11,0,302	0/0:15,0:16:21.06:0,21,308	0/0:36,2:38:17.33:0,17,1193	0/1:12,6:20:94.18:94,0,336	0/1:12,1:13:13.96:14,0,215	0/1:33,3:37:38.01:38,0,903	0/0:12,0:11:2.75:0,3,36	1/1:4,8:12:21.04:233,21,0	0/1:11,11:23:3.98:373,0,4	1/1:10,2:13:17.87:176,18,0
chr10	5255025	.	AG	A	903.19	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.600;DP=668;FS=12.110;HRun=1;HaplotypeScore=104.0595;InbreedingCoeff=0.5851;MQ=70.69;MQ0=8;MQRankSum=-3.749;QD=19.22;ReadPosRankSum=-2.864;VQSLOD=2.2064;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:16,31:42:25.95:996,26,0	0/0:7,0:7:21.07:0,21,336	0/0:32,0:20:3.81:0,4,534	0/0:37,1:20:0.21:0,0,453	0/0:18,0:18:45.14:0,45,693	0/0:22,0:22:66.23:0,66,1053	0/0:25,0:25:69.23:0,69,1091	0/0:40,0:36:93.20:0,93,1324	0/0:21,0:21:63.21:0,63,989	0/0:26,0:26:78.27:0,78,1234	0/0:16,0:16:41.69:0,42,669	0/0:13,0:13:36.11:0,36,564	0/0:29,0:29:87.28:0,87,1357	0/0:17,0:17:42.14:0,42,669	0/0:27,0:25:10.33:0,10,157	0/0:23,0:22:14.61:0,15,151	0/0:19,0:18:17.10:0,17,226	0/0:10,0:8:9.76:0,10,88	0/0:24,0:24:69.22:0,69,1056	0/0:15,0:15:39.13:0,39,621	0/0:47,0:47:99:0,141,2242	0/0:21,0:21:51.17:0,51,801	0/0:15,0:15:42.14:0,42,660	0/0:40,0:40:99:0,117,1834	0/0:18,0:17:4.72:0,5,67	0/0:21,0:21:60.19:0,60,907	0/0:27,0:27:75.26:0,75,1172	0/0:10,0:10:30.10:0,30,455
chr10	5255026	.	G	GAGGAGA	1245.32	PASS	AB=0.990;AC=5;AF=0.089;AN=56;BaseQRankSum=9.250;DP=679;FS=0.000;HRun=0;HaplotypeScore=182.7118;InbreedingCoeff=0.3459;MQ=72.06;MQ0=7;MQRankSum=-4.555;QD=10.12;ReadPosRankSum=-4.847;VQSLOD=0.7977;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:41,5:42:89.76:1284,90,0	0/0:8,0:8:21.07:0,21,497	0/1:32,0:22:31.16:31,0,610	0/0:38,0:21:13.25:0,13,564	0/0:18,0:18:45.14:0,45,980	0/0:22,0:22:66.23:0,66,1434	0/0:27,0:27:62.50:0,62,1404	0/0:39,0:35:55.92:0,56,1302	0/0:22,0:22:63.20:0,63,1340	0/0:26,0:26:78.27:0,78,1715	0/0:16,0:16:41.77:0,42,984	0/0:14,0:14:30.09:0,30,625	0/0:29,0:29:75.26:0,75,1701	0/0:17,0:17:42.13:0,42,961	0/0:26,0:24:23.09:0,23,276	0/1:24,0:23:44.25:44,0,57	0/1:19,0:18:0.92:1,0,401	0/0:11,0:9:3.81:0,4,108	0/0:24,0:24:61.43:0,61,1351	0/0:14,0:14:39.09:0,39,801	0/0:48,0:48:99:0,129,2845	0/0:22,0:22:48.16:0,48,1080	0/0:15,0:15:39.13:0,39,913	0/0:43,0:43:99:0,111,2367	0/0:18,0:17:12.95:0,13,175	0/0:21,0:21:57.10:0,57,1201	0/0:27,0:27:74.57:0,75,1686	0/0:10,0:10:30.10:0,30,650
chr10	5255319	.	A	AGT	281.06	PASS	AB=0.967;AC=13;AF=0.260;AN=50;BaseQRankSum=1.032;DP=551;FS=9.563;HRun=0;HaplotypeScore=93.9158;InbreedingCoeff=0.1468;MQ=61.27;MQ0=13;MQRankSum=0.642;QD=1.20;ReadPosRankSum=0.395;VQSLOD=0.4570;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:26:7.67:16,0,8	0/0:7,0:7:2.60:0,3,10	./.	./.	0/1:14,0:14:0:0,0,0	0/0:18,0:17:19.97:0,20,153	0/1:25,0:25:30.64:31,0,118	0/1:31,0:30:12.45:12,0,16	0/0:15,0:16:7.36:0,7,55	0/0:20,0:19:11.81:0,12,104	0/0:11,0:10:2.99:0,3,23	0/1:21,8:30:25.27:43,0,25	0/1:17,0:17:34.92:35,0,53	0/0:11,0:16:14.43:0,14,138	0/0:11,0:15:2.15:0,2,13	0/0:3,0:10:2.73:0,3,14	0/1:32,0:31:13.39:13,0,18	0/0:16,0:15:3.57:0,4,14	0/0:14,0:13:6.01:0,6,62	0/0:11,0:10:7.81:0,8,58	0/0:45,0:42:23.61:0,24,210	0/0:18,0:18:5.20:0,5,29	0/0:14,0:14:5.99:0,6,53	0/0:19,0:19:12.11:0,12,98	./.	1/1:25,0:25:12.91:116,13,0	1/1:13,0:13:4.56:31,5,0	1/1:20,0:19:9.97:124,10,0
chr10	5255367	.	C	CGT	264.57	PASS	AB=1.000;AC=8;AF=0.143;AN=56;BaseQRankSum=2.053;DP=563;FS=1.253;HRun=0;HaplotypeScore=91.2687;InbreedingCoeff=0.3215;MQ=51.59;MQ0=38;MQRankSum=-0.938;QD=2.78;ReadPosRankSum=-1.956;VQSLOD=1.9498;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:2.16:0,2,33	0/0:6,0:6:9.03:0,9,104	0/0:28,0:7:11.74:0,12,93	0/0:34,0:9:10.74:0,11,89	0/0:24,0:22:22.30:0,22,233	0/0:27,0:25:29.26:0,29,343	0/0:32,0:30:35.15:0,35,349	1/1:18,0:18:5.90:40,6,0	0/0:23,0:24:32.83:0,33,349	0/0:20,0:19:33.06:0,33,354	0/1:13,0:12:2.40:2,0,152	0/0:33,0:32:45.74:0,46,496	0/0:17,0:17:23.94:0,24,245	0/0:16,0:16:20.92:0,21,246	0/1:14,0:14:9.62:210,0,10	0/0:12,0:12:17.61:0,18,176	0/1:23,0:22:54.46:61,0,54	1/1:7,9:15:6.02:71,6,0	0/0:15,0:11:17.63:0,18,173	0/0:17,0:16:27.55:0,28,304	0/0:39,0:35:50.44:0,50,553	0/0:20,0:20:34.81:0,35,354	0/0:16,0:14:9.03:0,9,103	0/0:22,0:21:44.78:0,45,474	0/0:7,0:5:3.01:0,3,33	0/0:18,0:18:32.99:0,33,331	0/1:11,0:11:1.10:1,0,162	0/0:11,0:10:12.26:0,12,114
chr10	5255381	.	T	TGT	263.99	PASS	AB=0.943;AC=8;AF=0.143;AN=56;BaseQRankSum=1.827;DP=563;FS=1.239;HRun=0;HaplotypeScore=86.8039;InbreedingCoeff=0.3216;MQ=54.73;MQ0=31;MQRankSum=-1.153;QD=2.84;ReadPosRankSum=-3.682;VQSLOD=1.1402;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:34:2.16:0,2,33	0/0:6,0:6:9.03:0,9,104	0/0:40,0:19:11.24:0,11,92	0/0:40,0:15:10.74:0,11,89	0/0:23,0:21:22.30:0,22,233	0/0:20,0:20:30.08:0,30,344	0/0:29,0:27:35.15:0,35,349	1/1:21,0:21:5.90:40,6,0	0/0:26,0:26:32.73:0,33,349	0/0:17,0:17:32.98:0,33,354	0/1:15,0:14:2.40:2,0,152	0/0:34,0:33:45.74:0,46,496	0/0:21,0:21:23.94:0,24,245	0/0:12,0:12:20.93:0,21,246	0/1:15,0:15:9.62:210,0,10	0/0:9,0:9:17.61:0,18,176	0/1:12,4:16:54.46:60,0,54	1/1:15,0:15:6.02:71,6,0	0/0:14,0:11:20.57:0,21,191	0/0:14,0:14:27.55:0,28,304	0/0:33,0:30:50.44:0,50,553	0/0:22,0:22:34.81:0,35,354	0/0:16,0:14:9.03:0,9,103	0/0:25,0:24:44.78:0,45,474	0/0:7,0:5:3.01:0,3,33	0/0:18,0:18:32.99:0,33,331	0/1:10,0:10:1.10:1,0,162	0/0:8,0:8:12.26:0,12,114
chr10	5255494	.	GGAGAGGAGA	G	829.69	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=2.881;DP=710;FS=13.458;HRun=0;HaplotypeScore=173.6514;InbreedingCoeff=0.8580;MQ=53.79;MQ0=21;MQRankSum=-3.982;QD=10.37;ReadPosRankSum=-0.944;VQSLOD=1.8122;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:23,17:40:15.05:295,15,0	0/0:15,0:15:21.07:0,21,651	0/0:51,0:13:2.70:0,3,20	0/0:80,0:25:3.23:0,3,54	0/0:26,0:25:48.12:0,48,1300	0/0:21,0:21:39.09:0,39,1180	0/0:29,0:29:45.07:0,45,1309	1/1:27,0:24:18.06:260,18,0	0/0:26,0:26:51.08:0,51,1700	0/0:19,0:19:42.10:0,42,1155	0/0:13,0:13:18.06:0,18,535	0/0:24,0:23:39.13:0,39,1160	0/0:15,0:15:27.09:0,27,858	0/0:17,0:17:33.11:0,33,1096	0/0:22,0:22:42.10:0,42,1494	1/1:3,9:12:15.05:411,15,0	0/0:31,0:31:43.16:0,43,1830	0/0:35,0:33:66.23:0,66,2328	0/0:12,0:11:12.04:0,12,432	0/0:21,0:21:33.11:0,33,1188	0/0:28,0:28:63.20:0,63,2385	0/0:26,0:26:51.17:0,51,1674	0/0:21,0:21:39.13:0,39,1483	0/0:17,0:17:30.08:0,30,1007	0/0:15,0:15:27.06:0,27,874	0/0:25,0:25:51.17:0,51,1899	0/0:25,0:24:45.15:0,45,1481	0/0:16,0:16:24.08:0,24,839
chr10	5256842	.	TCAGGGTCC	T	231.10	PASS	AB=0.906;AC=3;AF=0.054;AN=56;BaseQRankSum=3.568;DP=448;FS=0.000;HRun=0;HaplotypeScore=110.3970;InbreedingCoeff=0.3376;MQ=60.76;MQ0=1;MQRankSum=-3.759;QD=5.25;ReadPosRankSum=0.444;VQSLOD=2.0023;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:29:27.60:28,0,120	0/0:3,0:1:3.01:0,3,41	0/0:17,0:12:7.24:0,7,90	0/0:20,0:12:8.39:0,8,149	0/0:11,0:10:15.05:0,15,421	0/0:10,0:10:21.07:0,21,684	0/0:32,0:32:48.13:0,48,1274	0/0:9,0:9:8.97:0,9,75	0/0:16,0:16:36.12:0,36,1222	0/0:13,0:13:27.09:0,27,803	0/0:6,0:6:11.79:0,12,196	0/0:27,0:27:57.19:0,57,1841	0/0:15,0:15:33.11:0,33,1279	0/0:17,0:17:39.13:0,39,991	0/0:18,0:18:36.11:0,36,877	1/1:5,10:15:12.04:302,12,0	0/0:24,0:24:51.18:0,51,1822	0/0:29,0:29:66.18:0,66,2291	0/0:17,0:14:18.02:0,18,339	0/0:7,0:7:9.03:0,9,264	0/0:38,0:37:63.19:0,63,1954	0/0:6,0:6:6.02:0,6,177	0/0:14,0:14:30.05:0,30,573	0/0:22,0:22:48.13:0,48,1422	0/0:5,0:5:3.01:0,3,124	0/0:12,0:11:21.07:0,21,666	0/0:14,0:14:30.10:0,30,891	0/0:1,0:1:3.01:0,3,47
chr10	5259686	.	T	TGTGTGTGC	115.83	PASS	AB=0.783;AC=2;AF=0.036;AN=56;BaseQRankSum=3.441;DP=505;FS=0.000;HRun=0;HaplotypeScore=120.6388;InbreedingCoeff=-0.0228;MQ=48.11;MQ0=28;MQRankSum=-0.925;QD=2.90;ReadPosRankSum=2.207;VQSLOD=1.9721;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:54.70:0,55,462	0/0:7,0:7:11.94:0,12,90	0/0:10,0:3:2.96:0,3,19	0/0:19,0:7:14.79:0,15,127	0/0:13,0:10:14.98:0,15,177	0/0:16,0:15:29.64:0,30,243	0/0:32,0:30:62.78:0,63,575	0/0:12,0:9:13.37:0,13,126	0/0:17,0:17:36.21:0,36,356	0/0:19,0:16:35.88:0,36,300	0/0:8,0:8:11.97:0,12,96	0/0:25,0:24:56.35:0,56,499	0/0:15,0:15:41.92:0,42,395	0/0:13,0:13:23.40:0,23,219	0/0:14,0:13:14.98:0,15,124	0/1:4,10:17:14.91:153,0,15	0/0:21,0:20:18.95:0,19,222	0/1:23,0:23:51.26:51,0,231	0/0:14,0:13:32.87:0,33,267	0/0:14,0:11:20.90:0,21,165	0/0:45,0:41:65.45:0,65,535	0/0:10,0:9:20.94:0,21,195	0/0:10,0:9:11.98:0,12,97	0/0:33,0:32:65.74:0,66,676	0/0:17,0:14:23.98:0,24,202	0/0:27,0:25:13.31:0,13,387	0/0:16,0:13:21.78:0,22,161	0/0:10,0:8:19.42:0,19,135
chr10	5259920	.	CT	C	6308.98	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=11.994;DP=517;FS=10.796;HRun=2;HaplotypeScore=72.6582;InbreedingCoeff=0.9773;MQ=93.59;MQ0=0;MQRankSum=-3.316;QD=33.92;ReadPosRankSum=3.338;VQSLOD=4.5137;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,39:39:99:1323,102,0	0/0:5,0:5:15.05:0,15,225	0/0:22,0:22:60.11:0,60,824	0/0:28,0:28:78.18:0,78,1039	0/0:14,0:14:42.14:0,42,616	0/0:13,0:13:36.08:0,36,514	0/0:25,0:25:75.22:0,75,1068	1/1:0,21:21:63.17:796,63,0	0/0:25,0:25:75.25:0,75,1107	0/0:4,0:4:9.03:0,9,135	0/0:4,0:4:12.04:0,12,179	0/0:19,0:19:57.18:0,57,830	0/0:10,0:10:30.10:0,30,448	0/0:19,0:19:57.16:0,57,788	1/1:0,21:21:60.15:759,60,0	1/1:1,22:22:66.17:823,66,0	1/1:0,41:41:96.31:1246,96,0	1/1:1,24:25:66.21:856,66,0	0/0:21,0:21:54.17:0,54,789	0/0:5,0:5:15.05:0,15,225	0/0:33,0:33:90.29:0,90,1328	0/0:9,0:9:24.07:0,24,342	0/0:12,0:12:33.11:0,33,489	0/0:29,0:29:87.28:0,87,1284	1/1:2,14:16:39.13:506,39,0	0/0:14,0:14:39.13:0,39,561	0/0:12,0:12:36.09:0,36,515	0/0:8,0:8:24.08:0,24,360
chr10	5259976	.	GAGA	G	366	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.794;DP=491;FS=5.077;HRun=0;HaplotypeScore=80.5177;InbreedingCoeff=0.9064;MQ=78.80;MQ0=1;MQRankSum=-2.626;QD=36.60;ReadPosRankSum=2.686;VQSLOD=4.4932;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,117,2428	0/0:6,0:6:18.06:0,18,413	0/0:13,0:13:38.15:0,38,752	0/0:17,0:17:48.16:0,48,1071	0/0:11,0:11:30.09:0,30,646	0/0:10,0:10:27.08:0,27,580	0/0:35,0:34:99:0,99,2261	0/0:34,0:34:93.32:0,93,2143	0/0:14,0:14:39.13:0,39,891	0/0:5,0:5:12.04:0,12,277	0/0:8,0:8:24.08:0,24,549	0/0:20,0:20:57.16:0,57,1184	0/0:13,0:13:39.13:0,39,898	0/0:16,0:16:45.14:0,45,995	0/0:27,0:27:72.24:0,72,1617	1/1:1,9:10:27.09:460,27,0	0/0:30,0:30:60.21:0,60,1383	0/0:31,0:31:87.30:0,87,1957	0/0:21,0:21:63.18:0,63,1346	0/0:12,0:12:29.96:0,30,456	0/0:24,0:24:60.16:0,60,1290	0/0:12,0:12:36.10:0,36,742	0/0:12,0:12:33.11:0,33,754	0/0:19,0:19:55.71:0,56,1118	0/0:15,0:14:33.11:0,33,761	0/0:13,0:13:33.11:0,33,761	0/0:17,0:17:51.14:0,51,1126	0/0:3,0:3:9.03:0,9,208
chr10	5260071	.	TGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA	T	500.99	PASS	AB=0.882;AC=7;AF=0.159;AN=44;BaseQRankSum=-1.975;DP=353;FS=6.669;HRun=0;HaplotypeScore=208.3617;InbreedingCoeff=0.4951;MQ=36.67;MQ0=54;MQRankSum=-3.598;QD=7.26;ReadPosRankSum=-2.763;VQSLOD=1.5250;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:21:3.01:187,3,0	0/0:7,0:7:15.52:0,16,1312	./.	./.	0/0:12,0:12:3:0,3,28	0/0:13,0:12:24.08:0,24,2650	0/0:24,0:22:12.51:0,13,229	./.	0/0:19,0:19:32.66:0,33,1909	0/0:12,0:10:15.05:0,15,1305	./.	0/0:14,0:13:11.51:0,12,1259	0/0:13,0:11:16.40:0,16,1812	0/0:17,0:14:21.29:0,21,2081	./.	0/1:13,0:11:17.87:18,0,215	0/0:13,0:8:4.21:0,4,323	1/1:17,1:14:8.85:388,9,0	0/0:16,0:13:30.10:0,30,3081	0/0:11,0:5:3.01:0,3,309	0/0:6,0:4:0.47:0,0,1	0/0:11,0:10:7.27:0,7,1020	./.	0/0:27,0:22:27.09:0,27,3491	1/1:10,2:9:2.98:22,3,0	0/0:9,0:11:27.09:0,27,2297	0/0:10,0:8:20.28:0,20,1139	0/0:15,0:9:18.06:0,18,2072
chr10	5260276	.	C	CG	384.26	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.407;DP=588;FS=4.891;HRun=7;HaplotypeScore=77.2878;InbreedingCoeff=0.8932;MQ=80.60;MQ0=0;MQRankSum=-3.484;QD=25.62;ReadPosRankSum=-2.838;VQSLOD=3.0247;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:81.04:0,81,768	0/0:8,0:8:18.03:0,18,174	0/0:18,0:18:25.41:0,25,382	0/0:18,0:18:26.92:0,27,295	0/0:14,0:14:42.07:0,42,405	0/0:27,0:27:69.09:0,69,661	0/0:31,0:31:75.07:0,75,715	0/0:23,0:23:60.07:0,60,574	0/0:29,0:29:69.11:0,69,666	0/0:17,0:17:39.05:0,39,376	0/0:10,0:10:27.03:0,27,256	0/0:17,0:17:48.04:0,48,455	0/0:22,0:22:60.09:0,60,579	0/0:17,0:17:42.06:0,42,405	0/0:18,0:18:36.03:0,36,342	1/1:3,12:15:42.07:479,42,0	0/0:31,0:31:81.13:0,81,782	0/0:35,0:35:93.13:0,93,892	0/0:25,0:25:64.65:0,65,613	0/0:15,0:15:39.05:0,39,371	0/0:41,0:41:99:0,105,1014	0/0:5,0:5:6.01:0,6,58	0/0:11,0:11:30.04:0,30,289	0/0:36,0:36:99:0,102,978	0/0:18,0:18:45.07:0,45,434	0/0:22,0:22:63.04:0,63,594	0/0:17,0:16:42.06:0,42,405	0/0:13,0:13:24.03:0,24,232
chr10	5260302	.	GT	G	5634.45	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=9.705;DP=574;FS=4.082;HRun=3;HaplotypeScore=61.6290;InbreedingCoeff=0.9972;MQ=83.35;MQ0=0;MQRankSum=-2.586;QD=33.14;ReadPosRankSum=0.494;VQSLOD=5.1859;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,32:33:93.29:1153,93,0	0/0:6,0:6:18.06:0,18,258	0/0:19,0:19:44.74:0,45,659	0/0:18,0:18:42.14:0,42,589	0/0:17,0:17:48.16:0,48,677	0/0:24,0:24:72.24:0,72,1037	0/0:35,0:35:99:0,99,1398	1/1:3,29:32:87.25:1063,87,0	0/0:25,0:25:75.25:0,75,1076	0/0:16,0:16:48.16:0,48,685	0/0:11,0:11:33.11:0,33,474	0/0:18,0:18:51.17:0,51,734	0/0:19,0:19:57.19:0,57,820	0/0:17,0:17:51.17:0,51,730	1/1:1,13:14:39.12:483,39,0	1/1:5,10:15:30.09:371,30,0	1/1:0,29:29:84.26:1041,84,0	1/1:4,25:29:69.22:855,69,0	0/0:26,0:26:78.25:0,78,1104	0/0:14,0:14:36.12:0,36,517	0/0:36,0:36:99:0,105,1438	0/0:7,0:7:21.07:0,21,302	0/0:16,0:16:48.16:0,48,683	0/0:29,0:29:87.29:0,87,1249	1/1:0,18:18:54.17:668,54,0	0/0:29,0:29:87.28:0,87,1218	0/0:14,0:13:42.14:0,42,604	0/0:8,0:8:24.08:0,24,346
chr10	5260729	.	GCCTTCTC	G	6907.31	PASS	AB=0.545;AC=13;AF=0.232;AN=56;BaseQRankSum=14.063;DP=639;FS=1.873;HRun=0;HaplotypeScore=161.8238;InbreedingCoeff=0.8991;MQ=82.33;MQ0=0;MQRankSum=-14.571;QD=47.31;ReadPosRankSum=1.964;VQSLOD=4.8990;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,15:21:30.10:748,30,0	0/0:9,0:9:27.09:0,27,938	0/0:30,0:30:67.11:0,67,2354	0/0:29,0:29:69.23:0,69,2358	0/0:19,0:19:51.18:0,51,1942	0/0:24,0:24:69.22:0,69,2570	0/0:25,0:25:73.46:0,73,2564	1/1:10,12:22:36.12:893,36,0	0/0:32,0:32:90.30:0,90,3333	0/0:39,0:39:99:0,117,4153	0/0:15,0:15:45.15:0,45,1639	0/0:20,0:20:54.19:0,54,2033	0/0:24,0:24:69.24:0,69,2649	0/0:19,0:19:51.18:0,51,1986	1/1:2,19:21:54.19:1341,54,0	0/1:3,15:18:77.83:859,0,78	1/1:6,23:29:54.19:1347,54,0	1/1:4,14:18:36.12:898,36,0	0/0:21,0:21:51.18:0,51,1933	0/0:13,0:13:33.11:0,33,1219	0/0:48,0:48:99:0,126,4692	0/0:22,0:22:66.23:0,66,2489	0/0:9,0:9:27.05:0,27,955	0/0:23,0:23:63.21:0,63,2215	1/1:6,11:17:33.11:823,33,0	0/0:36,0:36:96.33:0,96,3698	0/0:24,0:24:72.25:0,72,2757	0/0:12,0:12:33.11:0,33,1273
chr10	5260991	.	G	GGC	3542.46	PASS	AB=0.578;AC=12;AF=0.214;AN=56;BaseQRankSum=13.664;DP=564;FS=7.424;HRun=0;HaplotypeScore=92.9901;InbreedingCoeff=0.8207;MQ=78.34;MQ0=0;MQRankSum=-8.757;QD=27.68;ReadPosRankSum=1.437;VQSLOD=5.1331;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:5,0:13:14.83:15,0,38	0/0:10,0:10:30.10:0,30,459	0/0:18,0:18:48.61:0,49,671	0/0:15,0:15:32.42:0,32,472	0/0:24,0:24:66.21:0,66,969	0/0:28,0:28:81.26:0,81,1212	0/0:28,0:28:84.26:0,84,1224	1/1:2,10:12:22.31:183,22,0	0/0:20,0:20:60.20:0,60,918	0/0:34,0:34:93.31:0,93,1389	0/0:11,0:11:33.11:0,33,505	0/0:21,0:21:63.20:0,63,933	0/0:15,0:15:45.15:0,45,688	0/0:23,0:23:66.20:0,66,961	1/1:1,12:13:30.10:564,30,0	1/1:2,0:8:16.92:131,17,0	0/1:4,3:29:3.98:432,0,4	1/1:3,32:36:84.03:1523,84,0	0/0:24,0:24:72.21:0,72,1038	0/0:20,0:20:60.20:0,60,913	0/0:22,0:22:66.21:0,66,987	0/0:28,0:28:81.26:0,81,1217	0/0:9,0:9:27.09:0,27,411	0/0:24,0:24:69.23:0,69,1031	1/1:2,14:17:39.12:695,39,0	0/0:20,0:20:57.18:0,57,846	0/0:27,0:27:78.25:0,78,1172	0/0:13,0:13:30.10:0,30,459
chr10	5261806	.	AC	A	1578.41	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.932;DP=706;FS=4.381;HRun=3;HaplotypeScore=76.3528;InbreedingCoeff=0.9981;MQ=84.70;MQ0=0;MQRankSum=-3.524;QD=31.57;ReadPosRankSum=-0.525;VQSLOD=3.5329;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,47:50:99:1673,135,0	0/0:9,0:9:27.09:0,27,387	0/0:27,0:27:75.99:0,76,1090	0/0:16,0:16:41.87:0,42,560	0/0:21,0:21:63.19:0,63,886	0/0:24,0:24:72.21:0,72,996	0/0:29,0:29:81.26:0,81,1146	0/0:22,0:22:60.15:0,60,792	0/0:21,0:21:60.18:0,60,844	0/0:26,0:26:78.26:0,78,1108	0/0:11,0:11:30.10:0,30,430	0/0:33,0:33:99:0,99,1424	0/0:17,0:17:51.17:0,51,729	0/0:23,0:23:69.23:0,69,989	0/0:18,0:18:54.18:0,54,777	0/0:11,0:11:33.10:0,33,456	0/0:57,0:57:99:0,169,2377	0/0:30,0:29:90.30:0,90,1296	0/0:22,0:22:66.20:0,66,928	0/0:20,0:20:57.16:0,57,781	0/0:56,0:56:99:0,169,2395	0/0:24,0:24:69.18:0,69,922	0/0:18,0:18:51.14:0,51,694	0/0:43,0:43:99:0,117,1676	0/0:14,0:14:42.14:0,42,603	0/0:23,0:23:63.21:0,63,905	0/0:24,0:24:72.24:0,72,1033	0/0:17,0:17:51.17:0,51,733
chr10	5262808	.	C	CACACACACACACA	1961.58	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=11.191;DP=731;FS=0.513;HRun=0;HaplotypeScore=281.9462;InbreedingCoeff=0.9120;MQ=59.59;MQ0=1;MQRankSum=-4.765;QD=14.75;ReadPosRankSum=-3.385;VQSLOD=1.6794;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:26:1.36:55,1,0	0/0:17,0:17:48.14:0,48,1344	0/0:29,0:25:65.90:0,66,1360	0/0:26,0:25:64.19:0,64,1731	0/0:32,0:32:93.32:0,93,3458	0/0:28,0:28:81.22:0,81,2408	0/0:30,0:30:83.58:0,84,2540	1/1:26,0:24:46.89:461,47,0	0/0:27,0:27:81.21:0,81,2688	0/0:31,0:31:88.47:0,88,2742	0/0:21,0:21:57.13:0,57,1716	0/0:35,0:35:99:0,102,3219	0/0:20,0:20:57.15:0,57,1642	0/0:20,0:20:60.19:0,60,1970	1/1:12,3:15:2.67:607,3,0	1/1:12,0:12:14.81:159,15,0	1/1:13,0:11:17.95:183,18,0	1/1:17,0:17:22.28:228,22,0	0/0:29,0:29:87.12:0,87,1614	0/0:26,0:26:72.25:0,72,2745	0/0:78,0:78:99:0,232,7390	0/0:26,0:26:72.18:0,72,2186	0/0:18,0:18:51.16:0,51,1628	0/0:35,0:35:99:0,102,3267	1/1:19,3:21:12.25:449,12,0	0/0:33,0:33:96.11:0,96,3145	0/0:21,0:21:61.68:0,62,1769	0/0:16,0:16:48.13:0,48,1580
chr10	5263775	.	CTTA	C	7039.03	PASS	AB=0.541;AC=13;AF=0.232;AN=56;BaseQRankSum=16.510;DP=638;FS=0.712;HRun=0;HaplotypeScore=97.1232;InbreedingCoeff=0.8989;MQ=76.95;MQ0=0;MQRankSum=-3.130;QD=37.05;ReadPosRankSum=1.547;VQSLOD=5.7908;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,37:44:93.32:1517,93,0	0/0:10,0:10:30.10:0,30,670	0/0:18,0:18:30.99:0,31,759	0/0:15,0:15:39.13:0,39,779	0/0:26,0:26:78.15:0,78,1628	0/0:17,0:17:51.16:0,51,1080	0/0:18,0:18:51.16:0,51,1098	1/1:3,22:25:63.19:974,63,0	0/0:23,0:23:63.20:0,63,1364	0/0:26,0:26:78.27:0,78,1743	0/0:20,0:20:60.21:0,60,1326	0/0:24,0:24:69.24:0,69,1513	0/0:19,0:19:51.18:0,51,1122	0/0:22,0:22:54.19:0,54,1188	1/1:1,22:23:60.20:979,60,0	0/1:3,17:20:37.90:698,0,38	1/1:2,31:33:70.78:1170,71,0	1/1:2,24:26:54.18:880,54,0	0/0:11,0:11:21.07:0,21,463	0/0:24,0:24:72.20:0,72,1481	0/0:24,0:24:69.22:0,69,1498	0/0:18,0:18:51.16:0,51,1098	0/0:20,0:20:54.19:0,54,1187	0/0:19,0:19:57.18:0,57,1230	1/1:0,19:19:51.17:820,51,0	0/0:36,0:36:99:0,105,2306	0/0:41,0:40:99:0,117,2480	0/0:17,0:17:51.18:0,51,1135
chr10	5264180	.	CA	C	1435.52	PASS	AB=0.963;AC=11;AF=0.196;AN=56;BaseQRankSum=14.732;DP=856;FS=14.736;HRun=3;HaplotypeScore=150.7796;InbreedingCoeff=0.6361;MQ=70.36;MQ0=2;MQRankSum=-8.365;QD=7.93;ReadPosRankSum=-2.577;VQSLOD=-0.5096;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:36,3:36:65.43:400,65,0	0/0:12,0:12:36.12:0,36,514	0/0:38,0:30:84.23:0,84,1129	0/0:41,0:39:99:0,105,1434	0/0:30,0:30:81.26:0,81,1147	0/0:29,0:29:87.27:0,87,1213	0/0:50,0:50:99:0,138,1974	1/1:19,6:24:55.95:448,56,0	0/0:45,0:45:99:0,125,1774	0/0:40,0:40:99:0,117,1657	0/0:24,0:24:66.22:0,66,938	0/0:41,0:41:99:0,120,1688	0/0:25,0:25:66.22:0,66,950	0/0:39,0:39:99:0,117,1658	0/1:36,0:37:45.55:241,0,46	1/1:8,14:22:57.51:333,58,0	0/1:24,1:25:25.89:85,0,26	1/1:12,0:12:6.59:47,7,0	0/0:18,0:18:48.15:0,48,670	0/0:24,0:24:72.21:0,72,1014	0/0:46,0:45:99:0,132,1859	0/0:34,0:34:99:0,102,1468	0/0:26,0:26:78.26:0,78,1122	0/0:34,0:34:99:0,99,1425	0/1:20,1:21:46.86:50,0,47	0/0:32,0:32:90.29:0,90,1260	0/0:31,0:31:93.31:0,93,1339	0/0:16,0:16:42.14:0,42,604
chr10	5264191	.	C	CTA	666.21	PASS	AB=0.612;AC=5;AF=0.089;AN=56;BaseQRankSum=11.729;DP=882;FS=28.201;HRun=0;HaplotypeScore=192.9923;InbreedingCoeff=0.7790;MQ=65.63;MQ0=6;MQRankSum=-8.234;QD=7.84;ReadPosRankSum=-2.893;VQSLOD=1.3670;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,0:32:29.67:268,30,0	0/0:10,0:10:30.08:0,30,442	0/0:46,0:37:98.16:0,98,1435	0/0:48,1:38:80.82:0,81,1311	0/0:25,0:25:72.22:0,72,1118	0/0:26,0:26:78.22:0,78,1237	0/0:48,0:48:99:0,138,2076	0/1:11,0:29:87.62:88,0,95	0/0:41,0:41:99:0,117,1900	0/0:40,0:40:99:0,111,1595	0/0:25,0:25:75.22:0,75,1138	0/0:44,0:44:99:0,129,2051	0/0:25,0:25:69.20:0,69,1072	0/0:39,0:39:99:0,114,1825	0/0:38,0:38:36.35:0,36,456	1/1:4,0:20:47.62:440,48,0	0/0:28,0:28:41.98:0,42,384	0/0:13,0:13:26.24:0,26,160	0/0:16,0:16:48.15:0,48,719	0/0:28,0:28:78.24:0,78,1205	0/0:50,0:49:99:0,144,2184	0/0:37,0:37:99:0,108,1607	0/0:27,0:27:78.21:0,78,1166	0/0:37,0:37:99:0,101,1563	0/0:21,0:22:25.87:0,26,246	0/0:34,0:34:99:0,99,1458	0/0:31,0:31:93.29:0,93,1449	0/0:16,0:16:42.14:0,42,679
chr10	5264225	.	A	ACT	2805.34	PASS	AB=0.771;AC=12;AF=0.214;AN=56;BaseQRankSum=15.937;DP=971;FS=20.672;HRun=0;HaplotypeScore=213.9850;InbreedingCoeff=0.8293;MQ=55.48;MQ0=9;MQRankSum=-11.050;QD=13.17;ReadPosRankSum=-2.209;VQSLOD=1.7865;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:30,12:39:2.50:265,0,2	0/0:10,0:10:30.02:0,30,386	0/0:50,0:33:83.88:0,84,977	0/0:53,0:29:70.28:0,70,737	0/0:24,0:24:66.05:0,66,806	0/0:32,0:32:75.25:0,75,1194	0/0:42,0:42:99:0,111,1414	1/1:37,0:37:30.30:483,30,0	0/0:42,0:42:99:0,120,1630	0/0:36,0:36:99:0,106,1410	0/0:21,0:21:63.14:0,63,856	0/0:42,0:42:99:0,120,1718	0/0:29,0:29:87.05:0,87,1115	0/0:48,0:48:99:0,135,1873	1/1:14,21:35:20.45:586,20,0	1/1:14,15:29:13.82:571,14,0	1/1:17,7:24:5.82:255,6,0	0/1:9,4:13:4.67:211,0,5	0/0:26,0:25:70.06:0,70,915	0/0:26,0:26:78.06:0,78,1008	0/0:74,0:73:99:0,204,2760	0/0:37,0:37:99:0,108,1418	0/0:30,0:30:75.13:0,75,1041	0/0:45,0:45:99:0,123,1623	1/1:16,16:32:48.09:609,48,0	0/0:38,0:38:99:0,108,1529	0/0:36,0:36:99:0,108,1415	0/0:17,0:17:48.03:0,48,616
chr10	5264228	.	C	CACACTCAT	10350.30	PASS	AB=0.887;AC=12;AF=0.214;AN=56;BaseQRankSum=14.173;DP=979;FS=18.457;HRun=0;HaplotypeScore=299.1515;InbreedingCoeff=0.7793;MQ=55.35;MQ0=6;MQRankSum=-14.592;QD=46.62;ReadPosRankSum=-1.407;VQSLOD=3.1717;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:31,10:39:40.96:951,41,0	0/0:11,0:11:30.08:0,30,665	0/0:50,0:32:78.47:0,78,1589	0/0:54,0:29:60.96:0,61,1085	0/0:21,0:21:59.84:0,60,1323	0/0:32,0:32:90.27:0,90,2247	0/0:42,0:42:99:0,101,2433	0/1:40,0:39:14.24:1559,0,14	0/0:42,0:42:99:0,117,2830	0/0:36,0:36:71.08:0,71,2388	0/0:22,0:22:57.17:0,57,1430	0/0:44,0:44:99:0,126,3219	0/0:29,0:29:78.20:0,78,1975	0/0:49,0:49:99:0,138,3484	1/1:17,20:37:53.88:2161,54,0	1/1:18,14:32:66.69:1962,67,0	0/1:17,7:24:37.51:972,0,38	1/1:10,3:13:9.21:621,9,0	0/0:23,0:22:65.01:0,65,1521	0/0:27,0:27:75.23:0,75,1805	0/0:78,0:77:99:0,202,4962	0/0:37,0:37:99:0,102,2455	0/0:29,0:29:81.22:0,81,1966	0/0:44,0:44:99:0,120,2860	1/1:19,15:34:72.20:2125,72,0	0/0:37,0:37:99:0,108,2740	0/0:36,0:36:99:0,102,2528	0/0:14,0:14:39.09:0,39,991
chr10	5264299	.	G	GAC	1047.44	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=0.479;DP=1087;FS=0.000;HRun=0;HaplotypeScore=155.3677;InbreedingCoeff=0.9269;MQ=59.60;MQ0=8;MQRankSum=1.659;QD=34.91;ReadPosRankSum=-0.885;VQSLOD=4.4656;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:41:99:0,105,1277	0/0:16,0:16:45.14:0,45,557	0/0:63,0:34:61.64:0,62,736	0/0:77,0:45:7.51:0,8,607	0/0:25,0:25:69.20:0,69,843	0/0:29,0:28:63.04:0,63,765	0/0:36,0:37:87.06:0,87,1004	0/0:50,0:50:99:0,108,1285	0/0:42,0:42:99:0,108,1337	0/0:43,0:44:99:0,114,1343	0/0:18,0:19:36.38:0,36,398	0/0:47,0:47:99:0,111,1363	0/0:28,0:28:69.22:0,69,853	0/0:33,0:33:81.21:0,81,965	0/0:37,0:37:81.09:0,81,978	1/1:8,22:30:38.05:1142,38,0	0/0:34,0:35:87.10:0,87,1055	0/0:25,0:25:72.23:0,72,892	0/0:27,0:27:66.13:0,66,763	0/0:24,0:24:54.17:0,54,669	0/0:119,0:121:99:0,260,3588	0/0:35,0:35:99:0,99,1226	0/0:25,0:25:60.16:0,60,719	0/0:58,0:58:99:0,144,1782	0/0:25,0:26:50.99:0,51,609	0/0:40,0:40:99:0,102,1211	0/0:36,0:36:84.25:0,84,1026	0/0:16,0:16:39.11:0,39,469
chr10	5264368	.	ATG	A	481.28	PASS	AB=0.767;AC=1;AF=0.018;AN=56;BaseQRankSum=5.291;DP=1035;FS=0.000;HRun=0;HaplotypeScore=154.9009;InbreedingCoeff=-0.0188;MQ=59.67;MQ0=2;MQRankSum=-5.108;QD=10.46;ReadPosRankSum=-1.931;VQSLOD=3.0884;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:38.76:0,39,384	0/0:11,0:11:33.11:0,33,670	0/0:57,1:45:99:0,126,2465	0/0:55,0:44:99:0,110,2243	0/0:30,0:30:90.29:0,90,1740	0/0:34,0:33:96.31:0,96,1866	0/0:32,0:32:93.32:0,93,1804	0/1:32,14:45:99:556,0,1144	0/0:29,0:29:87.28:0,87,1690	0/0:45,0:45:99:0,135,2637	0/0:27,0:27:81.28:0,81,1614	0/0:45,0:45:99:0,132,2653	0/0:38,0:38:99:0,114,2226	0/0:38,0:38:99:0,111,2166	0/0:26,0:26:38.99:0,39,439	0/0:16,0:16:27.03:0,27,308	0/0:20,1:21:15.03:0,15,186	0/0:20,0:20:28.04:0,28,396	0/0:27,0:25:75.26:0,75,1476	0/0:33,0:33:96.79:0,97,1864	0/0:111,0:111:99:0,307,5887	0/0:37,0:37:99:0,111,2173	0/0:32,0:32:96.32:0,96,1864	0/0:55,0:55:99:0,155,3019	0/0:27,0:27:35.03:0,35,342	0/0:47,0:47:99:0,141,2710	0/0:32,0:32:96.29:0,96,1851	0/0:28,0:28:84.29:0,84,1703
chr10	5264370	.	G	GCACACACACACCA	12215.56	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=1.858;DP=1068;FS=12.680;HRun=0;HaplotypeScore=343.0387;InbreedingCoeff=0.9932;MQ=58.75;MQ0=2;MQRankSum=-14.837;QD=52.20;ReadPosRankSum=-3.475;VQSLOD=3.1267;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:17,22:43:54.14:2814,54,0	0/0:11,0:11:30.10:0,30,979	0/0:58,0:45:69.54:0,70,1933	0/0:54,0:42:86.60:0,87,2549	0/0:29,0:29:78.27:0,78,2785	0/0:33,0:32:87.30:0,87,2951	0/0:31,0:31:74.96:0,75,2560	1/1:49,0:48:99:3895,112,0	0/0:28,0:28:75.23:0,75,2384	0/0:46,0:46:99:0,102,3640	0/0:27,0:27:75.26:0,75,2714	0/0:47,0:47:99:0,126,4438	0/0:37,0:37:96.33:0,96,3336	0/0:37,0:37:99:0,99,3536	1/1:6,18:31:24.08:1289,24,0	1/1:7,10:22:27.05:1246,27,0	1/1:8,14:30:12.02:521,12,0	1/1:11,9:23:24.08:1074,24,0	0/0:30,0:28:63.21:0,63,1889	0/0:31,0:31:84.23:0,84,2879	0/0:105,0:105:99:0,247,8607	0/0:36,0:36:96.33:0,96,3375	0/0:30,0:30:78.27:0,78,2831	0/0:56,0:56:99:0,130,4536	1/1:2,25:35:30.10:1376,30,0	0/0:47,0:47:99:0,111,3563	0/0:32,0:32:87.26:0,87,3019	0/0:28,0:28:75.26:0,75,2742
chr10	5266274	.	C	CT	852.97	PASS	AB=0.966;AC=7;AF=0.125;AN=56;BaseQRankSum=3.068;DP=417;FS=5.128;HRun=9;HaplotypeScore=73.2600;InbreedingCoeff=0.8599;MQ=77.60;MQ0=2;MQRankSum=0.266;QD=10.15;ReadPosRankSum=-0.387;VQSLOD=2.4169;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,25:30:60.16:662,60,0	0/0:3,0:3:9:0,9,78	0/0:32,0:23:45.64:0,46,324	0/1:27,1:17:0.81:1,0,178	0/0:10,0:10:20.98:0,21,182	0/0:18,0:18:44.99:0,45,391	0/0:11,0:11:32.97:0,33,281	1/1:7,0:21:37.18:197,37,0	0/0:11,0:11:29.82:0,30,245	0/0:17,0:17:50.88:0,51,426	0/0:18,0:18:41.96:0,42,364	0/0:11,0:11:29.99:0,30,260	0/0:8,0:8:23.99:0,24,207	0/0:9,0:9:20.99:0,21,182	0/0:17,0:17:44.97:0,45,387	1/1:0,5:5:12.03:133,12,0	0/0:29,1:30:83.92:0,84,718	0/0:19,0:19:56.99:0,57,495	0/0:24,0:24:56.96:0,57,490	0/0:11,0:11:26.97:0,27,231	0/0:5,0:5:15:0,15,130	0/0:6,0:6:18:0,18,156	0/0:10,0:10:23.99:0,24,207	0/0:8,0:8:23.98:0,24,204	0/0:12,0:12:23.98:0,24,208	0/0:15,0:15:20.37:0,20,59	0/0:17,0:16:24.44:0,24,71	0/0:10,0:10:18.33:0,18,54
chr10	5266281	.	TTTCCTTTTTTTC	T	3601.72	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=6.580;DP=428;FS=1.427;HRun=0;HaplotypeScore=153.8980;InbreedingCoeff=0.9794;MQ=75.00;MQ0=4;MQRankSum=-7.404;QD=87.85;ReadPosRankSum=2.946;VQSLOD=3.4655;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:69.24:0,69,3749	0/0:6,0:6:18.06:0,18,973	0/0:35,0:23:58.26:0,58,2042	0/0:33,0:17:43.67:0,44,1496	0/0:11,0:11:33.11:0,33,1785	0/0:17,0:17:51.18:0,51,3086	0/0:12,0:12:36.12:0,36,2202	0/0:19,0:19:57.19:0,57,2459	0/0:12,0:12:36.11:0,36,1980	0/0:18,0:18:54.19:0,54,3068	0/0:18,0:18:54.19:0,54,3035	0/0:12,0:12:36.12:0,36,2120	0/0:8,0:8:24.08:0,24,1482	0/0:8,0:8:24.07:0,24,1338	0/0:17,0:17:51.18:0,51,2962	0/0:6,0:6:14.78:0,15,844	0/0:34,0:33:99:0,99,5428	0/0:20,0:20:60.21:0,60,3725	0/0:24,0:24:72.22:0,72,3585	0/0:11,0:11:33.11:0,33,2021	0/0:5,0:5:15.05:0,15,891	0/0:6,0:6:18.06:0,18,1126	0/0:9,0:9:27.09:0,27,1658	0/0:8,0:8:24.08:0,24,1480	0/0:10,0:10:30.10:0,30,1634	1/1:0,14:14:39.08:1220,39,0	1/1:1,17:18:36.12:1361,36,0	1/1:0,9:9:27.09:1022,27,0
chr10	5266583	.	A	AATATAT	2134.80	PASS	AB=0.519;AC=5;AF=0.089;AN=56;BaseQRankSum=-4.424;DP=379;FS=29.684;HRun=0;HaplotypeScore=81.0149;InbreedingCoeff=0.5847;MQ=61.28;MQ0=1;MQRankSum=-1.490;QD=21.78;ReadPosRankSum=-1.728;VQSLOD=1.3178;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,0:22:30.10:394,30,0	0/0:6,0:6:15.05:0,15,316	0/0:10,0:8:18.06:0,18,284	0/0:5,0:4:3.01:0,3,65	0/0:23,0:23:51.15:0,51,1031	0/0:16,0:16:45.15:0,45,943	0/0:15,0:15:39.10:0,39,768	1/1:14,15:35:63.19:1857,63,0	0/0:6,0:6:18.05:0,18,345	0/0:17,0:17:48.16:0,48,1027	0/0:8,0:8:24.08:0,24,532	0/0:8,0:8:21.07:0,21,466	0/0:8,0:8:24.06:0,24,452	0/0:10,0:10:27.09:0,27,575	0/0:1,0:8:2.20:0,2,6	0/0:12,0:12:30.10:0,30,628	0/1:3,0:40:8.64:9,0,21	0/0:1,0:19:7.54:0,8,20	0/0:17,0:17:48.15:0,48,964	0/0:6,0:6:18.05:0,18,346	0/0:5,0:5:15.02:0,15,247	0/0:1,0:1:3.01:0,3,67	0/0:8,0:8:21.03:0,21,368	0/0:7,0:7:9.03:0,9,199	0/0:0,0:7:2.83:0,3,7	0/0:14,0:14:30.09:0,30,626	0/0:24,0:24:57.18:0,57,1139	0/0:21,0:21:48.06:0,48,910
chr10	5266898	.	T	TG	9390.72	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-17.504;DP=665;FS=0.995;HRun=0;HaplotypeScore=65.4600;InbreedingCoeff=0.9991;MQ=94.33;MQ0=0;MQRankSum=-2.007;QD=45.37;ReadPosRankSum=3.776;VQSLOD=4.9039;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,45:46:99:2062,129,0	0/0:9,0:9:21.07:0,21,291	0/0:26,0:26:78.18:0,78,1035	0/0:34,0:34:84.24:0,84,1090	0/0:19,0:19:57.17:0,57,779	0/0:20,0:20:60.20:0,60,839	0/0:28,0:28:81.27:0,81,1130	1/1:1,23:24:72.25:1144,72,0	0/0:27,0:27:72.22:0,72,986	0/0:23,0:23:69.23:0,69,965	0/0:10,0:10:30.10:0,30,420	0/0:23,0:23:66.22:0,66,922	0/0:22,0:22:66.20:0,66,905	0/0:21,0:21:63.21:0,63,880	1/1:0,23:23:66.23:1055,66,0	1/1:0,19:19:51.17:816,51,0	1/1:0,46:46:99:2108,132,0	1/1:0,32:32:90.31:1439,90,0	0/0:20,0:20:57.19:0,57,787	0/0:19,0:19:51.16:0,51,696	0/0:48,0:48:99:0,135,1871	0/0:12,0:12:36.12:0,36,502	0/0:16,0:16:48.16:0,48,671	0/0:29,0:29:87.29:0,87,1210	1/1:0,17:17:48.16:768,48,0	0/0:22,0:22:66.22:0,66,922	0/0:17,0:17:51.15:0,51,694	0/0:13,0:13:36.12:0,36,503
chr10	5268720	.	A	AG	7708.02	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=18.214;DP=684;FS=0.658;HRun=1;HaplotypeScore=89.1981;InbreedingCoeff=0.9999;MQ=86.88;MQ0=0;MQRankSum=-5.961;QD=40.36;ReadPosRankSum=-0.006;VQSLOD=5.0131;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,39:39:99:1500,102,0	0/0:13,0:13:39.13:0,39,506	0/0:26,0:26:68.21:0,68,800	0/0:22,0:22:66.20:0,66,830	0/0:37,0:37:99:0,102,1310	0/0:23,0:23:66.21:0,66,844	0/0:27,0:27:81.26:0,81,1052	1/1:10,32:42:95.41:1615,95,0	0/0:12,0:12:33.11:0,33,428	0/0:34,0:34:93.30:0,93,1208	0/0:23,0:23:69.20:0,69,870	0/0:16,0:16:45.14:0,45,572	0/0:19,0:19:57.19:0,57,740	0/0:20,0:20:60.20:0,60,778	1/1:0,23:23:69.15:1005,69,0	1/1:0,18:18:54.18:809,54,0	1/1:1,17:18:48.16:719,48,0	1/1:1,20:21:60.20:897,60,0	0/0:24,0:24:69.16:0,69,849	0/0:24,0:24:69.21:0,69,881	0/0:22,0:22:63.16:0,63,799	0/0:28,0:28:84.26:0,84,1075	0/0:30,0:30:90.29:0,90,1168	0/0:17,0:16:51.15:0,51,647	1/1:2,27:30:78.26:1163,78,0	0/0:33,0:33:99:0,99,1233	0/0:29,0:29:87.27:0,87,1115	0/0:14,0:14:33.11:0,33,428
chr10	5268806	.	GGT	G	3858.08	PASS	AB=0.868;AC=17;AF=0.304;AN=56;BaseQRankSum=11.260;DP=701;FS=2.198;HRun=0;HaplotypeScore=89.7456;InbreedingCoeff=0.4761;MQ=74.47;MQ0=4;MQRankSum=-0.951;QD=13.30;ReadPosRankSum=2.951;VQSLOD=3.6967;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:11,28:38:84.26:1026,84,0	0/0:13,0:13:39.13:0,39,629	0/1:32,1:22:2.45:2,0,352	0/0:43,0:37:48.16:0,48,768	0/0:25,0:25:29.56:0,30,953	0/0:24,0:24:21.29:0,21,794	0/0:25,0:26:68.94:0,69,985	0/0:24,0:24:48.16:0,48,773	0/1:21,4:25:80.19:80,0,749	0/0:28,1:29:24.01:0,24,879	0/0:24,0:24:66.21:0,66,1033	0/0:20,1:20:57.16:0,57,862	0/1:17,2:19:28.11:28,0,558	0/1:18,2:20:31.17:31,0,510	1/1:6,18:24:63.03:747,63,0	0/1:7,13:19:6.51:434,0,7	1/1:8,13:19:39.10:463,39,0	1/1:7,11:17:33.10:402,33,0	0/1:20,2:22:31.05:31,0,518	0/0:40,0:40:99:0,99,1576	0/0:35,1:36:53.64:0,54,1320	0/0:25,0:25:51.14:0,51,779	0/1:27,3:30:1.08:1,0,946	0/0:22,0:22:60.16:0,60,944	1/1:6,12:18:51.15:612,51,0	0/0:37,1:38:59.60:0,60,1392	0/0:15,0:15:30.10:0,30,473	0/0:6,0:6:12.04:0,12,192
chr10	5269287	.	G	GTGGATGA	16286.16	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=7.577;DP=641;FS=13.587;HRun=0;HaplotypeScore=153.0417;InbreedingCoeff=0.9994;MQ=65.17;MQ0=0;MQRankSum=-17.455;QD=93.60;ReadPosRankSum=-3.506;VQSLOD=4.6130;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,30:41:93.31:3580,93,0	0/0:8,0:8:24.08:0,24,615	0/0:17,0:16:45.15:0,45,1142	0/0:17,0:17:39.13:0,39,883	0/0:24,0:24:72.21:0,72,1613	0/0:22,0:22:60.21:0,60,1503	0/0:16,0:16:48.16:0,48,1221	1/1:14,16:31:87.28:2862,87,0	0/0:22,0:22:66.21:0,66,1617	0/0:31,0:31:84.29:0,84,2104	0/0:14,0:14:39.13:0,39,969	0/0:24,0:24:69.24:0,69,1770	0/0:25,0:25:69.22:0,69,1706	0/0:22,0:22:60.21:0,60,1539	1/1:7,21:30:75.26:2872,75,0	1/1:10,16:26:66.17:2335,66,0	1/1:5,16:22:57.20:2244,57,0	1/1:4,8:12:36.08:1326,36,0	0/0:26,0:26:75.24:0,75,1731	0/0:20,0:20:57.20:0,57,1391	0/0:30,0:30:87.28:0,87,2133	0/0:17,0:17:48.16:0,48,1231	0/0:21,0:21:63.22:0,63,1614	0/0:33,0:33:93.30:0,93,2332	1/1:1,10:11:27.09:1067,27,0	0/0:28,0:28:84.29:0,84,2152	0/0:36,0:36:99:0,102,2568	0/0:14,0:14:39.13:0,39,1000
chr10	5269366	.	G	GAA	3512.36	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=2.933;DP=611;FS=7.976;HRun=10;HaplotypeScore=82.7900;InbreedingCoeff=0.9770;MQ=68.00;MQ0=0;MQRankSum=-3.667;QD=19.09;ReadPosRankSum=-1.001;VQSLOD=2.1736;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,40:44:90.26:1298,90,0	0/0:4,0:4:9:0,9,91	0/0:20,0:18:31.92:0,32,264	0/0:19,0:15:21.05:0,21,217	0/0:27,0:28:56.81:0,57,631	0/0:28,0:28:69.10:0,69,693	0/0:21,0:21:60.09:0,60,593	1/1:14,20:36:59.64:782,60,0	0/0:15,0:16:41.81:0,42,408	0/0:23,0:24:56.82:0,57,561	0/0:16,0:18:29.75:0,30,349	0/0:22,0:22:57.09:0,57,572	0/0:15,0:15:9.25:0,9,302	0/0:20,0:21:53.60:0,54,505	1/1:6,0:25:19.63:135,20,0	1/1:7,16:23:60.20:876,60,0	1/1:2,0:24:49.63:173,50,0	1/1:3,0:16:26.51:92,27,0	0/0:14,0:15:35.80:0,36,342	0/0:21,0:21:54.04:0,54,537	0/0:17,0:18:35.81:0,36,418	0/0:19,0:20:50.82:0,51,492	0/0:16,0:17:35.98:0,36,366	0/0:34,0:34:93.18:0,93,945	1/1:0,1:16:34.90:156,35,0	0/0:28,0:29:69.07:0,69,691	0/0:26,0:27:48.26:0,48,539	0/0:9,0:9:27.06:0,27,275
chr10	5269632	.	AGCGCGC	A	370.61	PASS	AB=0.925;AC=6;AF=0.115;AN=52;BaseQRankSum=6.397;DP=412;FS=13.250;HRun=0;HaplotypeScore=101.1978;InbreedingCoeff=0.4742;MQ=60.96;MQ0=2;MQRankSum=-6.023;QD=5.37;ReadPosRankSum=0.647;VQSLOD=1.1149;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:31:0.73:0,1,2	0/0:7,0:7:9.03:0,9,216	0/0:4,0:4:3:0,3,27	0/0:7,0:4:3.01:0,3,34	0/0:15,0:15:24.08:0,24,518	0/0:12,0:12:30.10:0,30,819	0/0:23,0:23:48.62:0,49,1187	0/1:26,0:25:80.22:80,0,131	0/0:16,0:16:36.03:0,36,791	0/0:17,0:16:41.99:0,42,853	0/0:12,0:12:18.04:0,18,358	0/0:11,0:12:27.08:0,27,575	0/0:10,0:10:18.06:0,18,403	0/0:13,0:13:20.98:0,21,401	./.	1/1:9,0:9:12.04:217,12,0	0/1:14,2:17:46.01:46,0,91	1/1:12,4:17:9.50:152,10,0	0/0:10,0:10:21.07:0,21,388	0/0:12,0:12:24.08:0,24,561	0/0:37,0:37:99:0,102,2254	0/0:8,0:8:18.04:0,18,337	0/0:12,0:12:23.76:0,24,631	0/0:32,0:31:81.28:0,81,2350	./.	0/0:14,0:13:30.10:0,30,683	0/0:6,0:6:15.05:0,15,380	0/0:11,0:10:21.07:0,21,504
chr10	5269641	.	GCGCGCGCACA	G	464.04	PASS	AB=1.000;AC=6;AF=0.107;AN=56;BaseQRankSum=5.769;DP=447;FS=12.191;HRun=0;HaplotypeScore=136.2527;InbreedingCoeff=0.2511;MQ=50.79;MQ0=8;MQRankSum=-5.767;QD=5.33;ReadPosRankSum=-0.131;VQSLOD=1.9327;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:3.77:0,4,22	0/0:5,0:5:12.04:0,12,358	0/0:1,0:1:3:0,3,27	0/0:5,0:1:3.01:0,3,34	0/0:15,0:15:36.12:0,36,1151	0/0:14,0:13:36.12:0,36,1278	0/0:27,0:27:63.16:0,63,1878	0/1:25,0:24:75.11:75,0,184	0/0:16,0:15:36.11:0,36,864	0/0:20,0:18:50.52:0,51,1292	0/0:13,0:13:17.85:0,18,536	0/0:11,0:11:30.09:0,30,881	0/0:13,0:13:33.09:0,33,942	0/0:14,0:14:36.01:0,36,857	0/0:18,0:18:12.03:0,12,258	1/1:1,7:9:11.88:385,12,0	0/1:23,0:22:20.44:20,0,730	0/1:19,0:19:52.71:100,0,53	0/0:10,0:10:4.66:0,5,492	0/0:12,0:11:24.08:0,24,700	0/0:44,0:44:99:0,123,3596	0/0:9,0:8:17.03:0,17,375	0/0:15,0:15:32.76:0,33,1129	0/0:36,0:35:93.32:0,93,3723	0/1:11,0:11:0:1,0,0	0/0:15,0:13:39.13:0,39,1100	0/0:7,0:7:15.05:0,15,485	0/0:9,0:8:24.08:0,24,956
chr10	5269647	.	G	GCA	109.72	PASS	AB=0.889;AC=7;AF=0.140;AN=50;BaseQRankSum=-0.593;DP=456;FS=0.000;HRun=0;HaplotypeScore=96.3570;InbreedingCoeff=0.1664;MQ=48.37;MQ0=9;MQRankSum=-1.778;QD=1.29;ReadPosRankSum=-0.593;VQSLOD=1.7350;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:28:2.61:12,3,0	0/0:5,0:5:8.94:0,9,65	./.	./.	0/0:19,0:19:23.24:0,23,148	0/0:15,0:14:11.93:0,12,89	0/0:32,0:32:29.36:0,29,231	./.	0/0:16,0:15:2.99:0,3,23	0/0:21,0:19:20.48:0,20,159	0/0:11,0:11:11.59:0,12,69	0/0:14,0:14:10.52:0,11,79	0/0:15,0:15:26.86:0,27,210	0/0:12,0:12:17.90:0,18,139	0/0:19,0:19:3:0,3,66	0/0:9,0:9:11.28:0,11,55	0/1:25,0:24:6.28:6,0,91	0/0:17,0:17:4:0,4,47	0/0:9,0:12:2.80:0,3,14	0/0:12,0:11:2.99:0,3,24	0/0:42,0:43:22.03:0,22,307	0/0:9,0:8:2.98:0,3,21	0/0:14,0:14:20.65:0,21,146	0/0:36,2:37:2.81:0,3,360	0/0:12,0:12:2.85:0,3,20	1/1:13,0:12:5.02:91,5,0	0/1:4,4:8:9.79:80,0,10	0/1:10,0:9:31.95:32,0,56
chr10	5269665	.	A	ATGCGCGCGCGTG	512	PASS	AB=0.934;AC=6;AF=0.107;AN=56;BaseQRankSum=5.390;DP=495;FS=1.193;HRun=0;HaplotypeScore=160.2758;InbreedingCoeff=0.3141;MQ=50.79;MQ0=20;MQRankSum=-4.548;QD=6.02;ReadPosRankSum=-2.468;VQSLOD=2.4060;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:9,5:12:0.10:0,0,0	0/0:5,0:5:15.05:0,15,578	0/0:12,0:1:3.01:0,3,31	0/1:22,0:4:8.64:9,0,154	0/0:25,0:25:54.26:0,54,1917	0/0:16,0:14:36.12:0,36,1367	0/0:34,0:34:75.67:0,76,2613	1/1:10,0:9:18.02:252,18,0	0/0:13,0:12:23.23:0,23,705	0/0:20,0:18:54.17:0,54,1838	0/0:14,0:14:24.08:0,24,837	0/0:15,0:16:34:0,34,1299	0/0:16,0:16:45.15:0,45,1675	0/0:13,0:13:30.10:0,30,1130	0/0:19,0:19:12.04:0,12,426	0/0:9,0:9:15.05:0,15,477	0/1:21,0:20:52.09:52,0,1466	0/1:18,0:18:99:317,0,853	0/0:15,0:15:42.08:0,42,1252	0/0:13,0:12:22.01:0,22,830	0/0:57,0:56:99:0,135,4467	0/0:9,0:8:14.88:0,15,552	0/0:14,0:14:33.10:0,33,1099	0/0:41,0:40:99:0,106,3631	0/0:12,0:12:6.07:0,6,220	0/0:19,0:17:48.15:0,48,1597	0/0:6,0:6:12.04:0,12,407	0/0:12,0:11:33.09:0,33,1152
chr10	5269754	.	GCCCAAGGCAGGAAATCTCAGAGACAGC	G	1709.13	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=6.133;DP=393;FS=11.941;HRun=0;HaplotypeScore=242.5008;InbreedingCoeff=0.8272;MQ=87.64;MQ0=0;MQRankSum=-5.677;QD=31.08;ReadPosRankSum=1.007;VQSLOD=0.8263;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:3,16:19:6.02:428,6,0	0/0:6,0:6:18.06:0,18,1717	0/0:17,0:17:36.12:0,36,2472	0/0:21,0:21:57.20:0,57,3922	0/0:11,0:11:27.04:0,27,1776	0/0:18,0:18:51.18:0,51,5476	0/0:24,0:24:63.22:0,63,6208	1/1:7,0:7:17.92:139,18,0	0/0:14,0:14:42.13:0,42,4202	0/0:18,0:18:48.16:0,48,4513	0/0:10,0:10:24.07:0,24,2321	0/0:11,0:11:33.11:0,33,3475	0/0:9,0:9:24.08:0,24,2366	0/0:15,0:15:45.15:0,45,4869	1/1:0,7:7:6.02:428,6,0	1/1:0,5:5:3.01:214,3,0	1/1:3,4:7:2.97:20,3,0	1/1:1,3:4:3.01:214,3,0	0/0:20,0:20:51.17:0,51,4114	0/0:11,0:11:33.10:0,33,2413	0/0:42,0:42:99:0,111,9340	0/0:9,0:9:24.08:0,24,2278	0/0:11,0:11:30.09:0,30,2635	0/0:41,0:41:99:0,114,11671	1/1:0,6:6:6.02:428,6,0	0/0:17,0:17:48.16:0,48,4402	0/0:7,0:7:21.07:0,21,2365	0/0:6,0:6:18.06:0,18,2074
chr10	5269918	.	AGTGTGTGTGT	A	1936.63	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=7.527;DP=430;FS=13.151;HRun=0;HaplotypeScore=118.0924;InbreedingCoeff=0.7192;MQ=65.99;MQ0=12;MQRankSum=-7.868;QD=18.99;ReadPosRankSum=1.379;VQSLOD=2.1205;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:16,23:40:5.69:644,6,0	0/0:4,0:4:9.03:0,9,345	0/0:27,0:9:6:0,6,65	0/0:35,0:25:27:0,27,324	0/0:6,0:6:9.01:0,9,319	0/0:15,0:15:30.04:0,30,801	0/0:23,0:22:39.11:0,39,1335	0/0:17,0:16:16.03:0,16,135	0/0:16,0:18:33.58:0,34,1544	0/0:9,0:9:15.05:0,15,647	0/0:7,0:6:12.04:0,12,568	0/0:14,0:16:39.09:0,39,1426	0/0:7,0:9:18.06:0,18,756	0/0:14,0:14:21.05:0,21,893	1/1:5,0:13:12.04:279,12,0	1/1:0,9:10:15.05:433,15,0	1/1:5,0:20:18.01:368,18,0	0/1:11,0:11:29.25:29,0,46	0/0:16,0:17:21.07:0,21,814	0/0:4,0:5:9.03:0,9,393	0/0:36,0:38:87.22:0,87,3479	0/0:3,0:4:9.02:0,9,266	0/0:2,0:2:3.01:0,3,151	0/0:27,0:31:57.16:0,57,2431	1/1:2,0:8:15.05:349,15,0	0/0:9,0:14:33.01:0,33,1139	0/0:3,0:8:12.51:0,13,515	0/0:4,0:4:9.03:0,9,413
chr10	5270124	.	CATATAT	C	148.37	PASS	AC=6;AF=0.250;AN=24;BaseQRankSum=1.029;DP=149;FS=1.974;HRun=0;HaplotypeScore=36.1806;InbreedingCoeff=0.4280;MQ=68.08;MQ0=3;MQRankSum=-0.941;QD=6.74;ReadPosRankSum=2.560;VQSLOD=1.3383;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:9.03:0,9,223	./.	./.	0/0:13,0:6:2.49:0,2,23	./.	./.	0/0:1,0:1:3.01:0,3,70	0/0:37,0:33:48.16:0,48,1026	./.	./.	./.	1/1:1,0:2:0.89:2,1,0	0/0:2,0:2:3.01:0,3,50	./.	./.	1/1:5,0:5:3.01:40,3,0	1/1:9,5:15:12.04:197,12,0	0/0:11,0:11:5.97:0,6,144	0/0:5,0:5:6.02:0,6,132	./.	./.	./.	./.	./.	0/0:5,0:5:3.01:0,3,94	./.	0/0:3,0:4:6.02:0,6,81	./.
chr10	5270325	.	GA	G	902.33	PASS	AB=0.800;AC=13;AF=0.232;AN=56;BaseQRankSum=7.383;DP=290;FS=3.209;HRun=7;HaplotypeScore=51.6107;InbreedingCoeff=0.7768;MQ=85.28;MQ0=3;MQRankSum=-3.740;QD=13.08;ReadPosRankSum=2.783;VQSLOD=2.6229;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:34,0:31:57.61:467,58,0	0/0:7,0:7:15.05:0,15,184	0/0:27,0:19:36.03:0,36,364	0/0:23,0:18:28.49:0,28,253	0/0:4,0:4:6.02:0,6,68	0/0:8,0:8:21:0,21,221	0/0:17,0:17:27.04:0,27,322	1/1:5,0:5:14.13:97,14,0	0/0:7,0:7:18:0,18,207	0/0:2,0:2:6.02:0,6,75	0/0:4,0:4:12.04:0,12,151	0/0:9,0:9:18.06:0,18,226	0/0:7,0:7:18.06:0,18,226	0/0:11,0:11:27.09:0,27,336	1/1:1,3:4:9.02:91,9,0	0/1:3,0:4:5.41:5,0,18	1/1:6,8:14:26.87:264,27,0	1/1:3,0:3:2.79:28,3,0	0/0:20,0:20:34.68:0,35,381	0/0:10,0:11:15.04:0,15,177	0/0:18,0:17:36.12:0,36,453	0/0:5,0:5:12.02:0,12,136	0/0:9,0:9:21.04:0,21,242	0/0:12,0:12:33:0,33,393	1/1:1,4:5:12.03:122,12,0	0/0:9,0:9:24.07:0,24,289	0/0:9,0:9:18.03:0,18,201	0/0:2,0:2:0.89:0,1,2
chr10	5270326	.	A	AG	1263.65	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=6.396;DP=300;FS=5.061;HRun=1;HaplotypeScore=54.7675;InbreedingCoeff=0.5048;MQ=85.67;MQ0=3;MQRankSum=-3.475;QD=18.31;ReadPosRankSum=2.941;VQSLOD=4.0649;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,34:32:72.10:1001,72,0	0/0:7,0:7:15.05:0,15,201	0/0:28,0:20:36.09:0,36,446	0/0:23,0:18:16.51:0,17,279	0/0:4,0:4:12.01:0,12,132	0/0:8,0:8:20.99:0,21,233	0/0:18,0:18:32.95:0,33,393	1/1:1,6:7:18.03:232,18,0	0/0:8,0:8:20.93:0,21,240	0/0:3,0:3:6.02:0,6,84	0/0:4,0:4:12.04:0,12,168	0/0:9,0:9:26.88:0,27,311	0/0:7,0:7:21.05:0,21,274	0/0:12,0:12:30.09:0,30,377	1/1:4,0:4:8.59:56,9,0	0/0:4,0:4:3.03:0,3,30	0/1:15,0:15:68.75:84,0,69	0/1:3,0:3:20.41:33,0,20	0/0:21,0:21:53.54:0,54,555	0/0:12,0:12:25.15:0,25,228	0/0:18,0:17:45.07:0,45,565	0/0:5,0:5:14.06:0,14,146	0/0:9,0:9:27.06:0,27,328	0/0:12,0:12:36.09:0,36,480	0/1:5,0:5:9.78:10,0,15	0/0:9,0:9:26.91:0,27,319	0/0:8,0:8:17.63:0,18,184	0/0:2,0:2:5.74:0,6,37
chr10	5270574	.	TA	T	6172.20	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=17.879;DP=719;FS=3.684;HRun=4;HaplotypeScore=96.0620;InbreedingCoeff=0.9970;MQ=71.59;MQ0=0;MQRankSum=-1.591;QD=33.18;ReadPosRankSum=1.094;VQSLOD=5.1015;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,44:45:99:1439,120,0	0/0:12,0:12:33.11:0,33,461	0/0:21,0:21:57.15:0,57,735	0/0:28,0:27:75.23:0,75,990	0/0:17,0:17:51.16:0,51,697	0/0:25,0:25:69.23:0,69,966	0/0:24,0:24:72.23:0,72,991	1/1:1,21:22:63.18:745,63,0	0/0:41,0:41:99:0,114,1592	0/0:41,0:41:99:0,120,1666	0/0:8,0:8:24.08:0,24,336	0/0:26,0:26:75.25:0,75,1050	0/0:22,0:22:66.19:0,66,903	0/0:23,0:23:66.20:0,66,905	1/1:0,27:27:78.24:936,78,0	1/1:1,19:20:18.16:642,18,0	1/1:0,42:42:99:1440,120,0	1/1:1,20:21:57.17:683,57,0	0/0:18,0:18:54.17:0,54,739	0/0:23,0:23:66.22:0,66,923	0/0:36,0:36:99:0,102,1372	0/0:21,0:21:57.15:0,57,776	0/0:23,0:23:63.21:0,63,882	0/0:42,0:42:99:0,123,1719	1/1:0,9:9:24.07:288,24,0	0/0:39,0:39:99:0,114,1544	0/0:35,0:35:99:0,102,1406	0/0:8,0:8:21.07:0,21,294
chr10	5270770	.	TAC	T	583.91	PASS	AB=0.949;AC=21;AF=0.404;AN=52;BaseQRankSum=7.269;DP=659;FS=7.365;HRun=0;HaplotypeScore=102.3706;InbreedingCoeff=0.2046;MQ=66.47;MQ0=9;MQRankSum=-1.145;QD=1.73;ReadPosRankSum=2.445;VQSLOD=1.0461;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:32.21:0,32,284	0/0:8,0:8:12.01:0,12,139	./.	./.	0/0:13,0:13:8.95:0,9,83	0/0:8,0:8:11.91:0,12,146	0/0:28,0:28:11.75:0,12,244	0/0:26,0:26:0.47:0,0,1	0/0:32,0:32:24.03:0,24,311	0/0:13,0:13:20.69:0,21,191	0/1:16,1:18:8.58:9,0,211	0/1:18,4:21:11.94:12,0,188	0/1:11,0:11:14.59:15,0,176	0/1:20,5:26:7.78:8,0,355	1/1:37,0:36:13.32:62,13,0	0/1:18,0:18:21.31:90,0,21	1/1:19,0:19:5.54:28,6,0	0/1:16,0:16:18.71:19,0,36	0/1:17,0:16:30.18:30,0,59	0/1:20,0:20:17.58:18,0,124	0/0:61,9:68:22.04:0,22,522	0/0:19,0:19:14.46:0,14,133	0/0:17,0:17:4.10:0,4,263	0/1:50,3:53:31.86:32,0,830	1/1:9,0:9:7.76:34,8,0	1/1:24,7:31:17.82:149,18,0	1/1:21,0:24:16.10:109,16,0	1/1:7,7:14:14.87:144,15,0
chr10	5270805	.	ACACACACACC	A	2495.43	PASS	AB=0.970;AC=9;AF=0.161;AN=56;BaseQRankSum=10.180;DP=730;FS=4.756;HRun=0;HaplotypeScore=200.0721;InbreedingCoeff=0.5886;MQ=55.50;MQ0=24;MQRankSum=-2.810;QD=17.45;ReadPosRankSum=0.584;VQSLOD=2.6005;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:35,0:33:79.10:79,0,1110	0/0:11,0:11:33.01:0,33,780	0/0:37,0:9:10.69:0,11,125	0/0:47,0:10:12.12:0,12,154	0/0:16,0:16:30.07:0,30,666	0/0:13,0:13:36.91:0,37,864	0/0:32,0:32:79.44:0,79,1647	0/1:21,0:21:99:254,0,148	0/0:24,0:25:68.29:0,68,1778	0/0:19,0:19:52.91:0,53,1195	0/0:20,0:20:51.56:0,52,1346	0/0:29,0:28:62.26:0,62,1466	0/0:14,0:14:42.03:0,42,1167	0/0:31,0:31:69.60:0,70,2128	1/1:3,22:25:22.44:605,22,0	0/0:23,0:23:35.08:0,35,613	1/1:23,2:25:46.43:611,46,0	0/1:18,2:20:99:584,0,102	0/0:19,0:18:51.10:0,51,1106	0/0:17,0:17:39.66:0,40,1058	0/0:77,0:74:99:0,172,3822	0/0:16,0:16:36.56:0,37,918	0/0:19,0:18:48.09:0,48,1398	0/0:48,0:47:99:0,124,4558	1/1:15,1:16:40.02:521,40,0	0/0:35,0:33:89.61:0,90,1589	0/0:17,0:17:39.85:0,40,612	0/0:22,0:21:51.09:0,51,893
chr10	5270811	.	ACACC	A	2351.29	PASS	AB=0.890;AC=12;AF=0.214;AN=56;BaseQRankSum=12.698;DP=697;FS=2.271;HRun=0;HaplotypeScore=130.5664;InbreedingCoeff=0.5425;MQ=58.71;MQ0=23;MQRankSum=-2.032;QD=13.91;ReadPosRankSum=0.170;VQSLOD=3.5799;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:35,0:33:99:276,0,192	0/0:11,0:11:33:0,33,490	0/0:39,0:11:13.23:0,13,155	0/0:47,0:12:2.62:0,3,120	0/0:16,0:16:27.02:0,27,304	0/0:16,0:16:45.90:0,46,580	0/0:31,0:31:75.53:0,76,1000	1/1:17,0:17:50.90:433,51,0	0/0:22,0:22:59.23:0,59,928	0/0:20,0:20:51.52:0,52,682	0/0:18,0:18:44.85:0,45,653	0/0:26,0:25:58.80:0,59,816	0/0:14,0:14:28.25:0,28,633	0/0:29,0:29:46.71:0,47,1074	1/1:25,0:24:18.04:210,18,0	0/1:4,15:19:99:368,0,103	1/1:21,0:21:42.48:385,42,0	0/1:21,0:21:20.64:438,0,21	0/0:20,0:19:48.79:0,49,605	0/0:14,0:14:36.67:0,37,501	0/0:76,0:73:99:0,163,2108	0/0:13,0:13:27.06:0,27,425	0/0:19,0:18:28.41:0,28,752	0/0:47,0:46:74.34:0,74,2110	1/1:16,0:16:38.02:352,38,0	0/0:31,0:30:48.66:0,49,589	0/1:15,0:15:63.80:64,0,152	0/0:19,0:18:24.08:0,24,324
chr10	5271458	.	T	TTCTC	423.58	PASS	AB=1.000;AC=9;AF=0.205;AN=44;BaseQRankSum=0.513;DP=384;FS=3.009;HRun=0;HaplotypeScore=97.7552;InbreedingCoeff=0.2407;MQ=63.20;MQ0=5;MQRankSum=-2.587;QD=4.55;ReadPosRankSum=-1.192;VQSLOD=2.0453;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:4,0:4:5.93:0,6,92	./.	./.	0/0:19,0:22:20.96:0,21,255	0/1:11,0:11:2.71:3,0,57	1/1:19,1:20:6.02:134,6,0	./.	0/0:10,0:9:2.97:0,3,20	0/0:12,0:12:8.16:0,8,137	0/0:10,0:10:3.01:0,3,46	0/0:18,0:19:5.92:0,6,39	0/0:9,0:9:8.99:0,9,93	0/0:9,0:8:2.76:0,3,37	./.	0/0:7,0:7:0.47:0,0,1	0/0:13,0:13:2.89:0,3,27	0/0:4,0:4:3:0,3,28	./.	0/1:16,0:16:15.92:16,0,65	0/0:19,0:21:9.02:0,9,120	0/0:12,0:12:3.01:0,3,46	0/0:17,0:17:2.82:0,3,46	0/0:10,0:10:9.02:0,9,117	0/0:9,0:9:2.88:0,3,15	1/1:13,2:16:14.31:188,14,0	1/1:10,2:12:6.02:130,6,0	0/1:18,0:18:10.55:76,0,11
chr10	5271596	.	A	ACC	1456.78	PASS	AB=1.000;AC=36;AF=0.692;AN=52;BaseQRankSum=-1.334;DP=279;FS=1.677;HRun=2;HaplotypeScore=236.0007;InbreedingCoeff=-0.1225;MQ=57.95;MQ0=0;MQRankSum=-3.125;QD=5.58;ReadPosRankSum=-0.829;VQSLOD=-0.5056;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:15:23.13:172,23,0	0/1:8,0:8:10.10:10,0,35	0/1:5,0:4:9.97:10,0,30	0/1:5,0:3:18.95:19,0,20	0/1:16,0:16:13.14:13,0,48	1/1:8,0:8:4.98:18,5,0	1/1:9,0:9:7.77:44,8,0	0/1:10,0:10:3.13:147,0,3	0/1:10,0:10:15.22:15,0,19	0/1:11,0:11:2.01:45,0,2	0/1:8,0:8:4.87:23,0,5	1/1:14,0:14:10.06:43,10,0	1/1:10,0:10:14.39:80,14,0	0/0:8,0:8:4.59:0,5,30	1/1:13,1:14:12.25:158,12,0	1/1:0,10:10:3.01:54,3,0	1/1:13,1:14:22.59:231,23,0	1/1:7,0:7:13.23:118,13,0	0/1:8,0:7:22.14:22,0,27	0/1:13,0:13:9.79:23,0,10	./.	0/1:12,0:12:0.69:1,0,57	0/1:8,0:8:2.78:41,0,3	./.	1/1:15,0:15:32.15:246,32,0	1/1:15,0:15:0.23:43,0,0	0/1:10,0:10:1.78:19,0,2	0/1:6,0:6:0.91:1,0,40
chr10	5271782	.	ATCGGTTACT	A	1356.16	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.015;DP=656;FS=24.361;HRun=0;HaplotypeScore=203.3245;InbreedingCoeff=0.9901;MQ=83.99;MQ0=0;MQRankSum=-3.958;QD=52.16;ReadPosRankSum=-2.248;VQSLOD=1.4671;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,129,5191	0/0:6,0:6:18.06:0,18,796	0/0:27,0:27:75.26:0,75,3072	0/0:17,0:17:45.15:0,45,1829	0/0:27,0:27:78.27:0,78,3571	0/0:12,0:12:36.12:0,36,1689	0/0:19,0:19:54.19:0,54,2550	1/1:8,18:26:54.16:1451,54,0	0/0:31,0:31:90.31:0,90,4261	0/0:11,0:11:33.11:0,33,1406	0/0:11,0:11:27.09:0,27,1323	0/0:30,0:30:81.28:0,81,3545	0/0:31,0:31:87.30:0,87,4065	0/0:20,0:20:57.20:0,57,2707	0/0:28,0:28:84.29:0,84,3320	0/0:28,0:28:84.27:0,84,3423	0/0:41,0:41:99:0,120,4840	0/0:31,0:31:78.24:0,78,3000	0/0:13,0:13:33.11:0,33,1578	0/0:19,0:19:48.11:0,48,1969	0/0:46,0:46:99:0,135,6182	0/0:19,0:19:54.19:0,54,2195	0/0:12,0:12:33.11:0,33,1419	0/0:34,0:34:99:0,102,4533	0/0:16,0:16:43.73:0,44,1812	0/0:21,0:21:63.22:0,63,2712	0/0:21,0:21:60.21:0,60,2602	0/0:15,0:15:42.14:0,42,2059
chr10	5271952	.	GAGA	G	8764.21	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=16.998;DP=730;FS=0.654;HRun=0;HaplotypeScore=115.9835;InbreedingCoeff=0.9991;MQ=75.78;MQ0=0;MQRankSum=-4.447;QD=40.20;ReadPosRankSum=2.498;VQSLOD=6.2365;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,43:44:99:1788,105,0	0/0:9,0:9:24.08:0,24,535	0/0:15,0:15:39.04:0,39,675	0/0:17,0:17:39.13:0,39,886	0/0:24,0:24:69.24:0,69,1589	0/0:16,0:16:48.09:0,48,944	0/0:54,0:54:99:0,160,3575	1/1:1,29:30:84.24:1316,84,0	0/0:31,0:31:93.30:0,93,2078	0/0:24,0:24:69.22:0,69,1507	0/0:15,0:15:45.14:0,45,991	0/0:33,0:33:99:0,99,2281	0/0:19,0:19:51.18:0,51,1156	0/0:32,0:32:96.33:0,96,2212	1/1:2,32:34:84.27:1419,84,0	1/1:0,29:29:66.23:1124,66,0	1/1:2,28:30:69.71:1176,70,0	1/1:1,39:40:84.29:1431,84,0	0/0:20,0:20:57.19:0,57,1257	0/0:12,0:12:36.11:0,36,783	0/0:63,0:63:99:0,178,4012	0/0:18,0:18:54.17:0,54,1200	0/0:8,0:8:24.04:0,24,504	0/0:39,0:39:99:0,117,2623	1/1:0,11:11:30.10:510,30,0	0/0:32,0:32:96.28:0,96,2123	0/0:18,0:18:54.18:0,54,1202	0/0:13,0:13:39.12:0,39,822
chr10	5272571	.	CT	C	1018.04	PASS	AB=0.888;AC=17;AF=0.304;AN=56;BaseQRankSum=5.558;DP=575;FS=6.633;HRun=14;HaplotypeScore=88.7881;InbreedingCoeff=0.6257;MQ=60.87;MQ0=8;MQRankSum=-0.939;QD=5.36;ReadPosRankSum=2.526;VQSLOD=2.6377;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:34.12:0,34,251	0/1:10,1:12:16.75:17,0,129	0/0:25,1:7:11.63:0,12,76	0/0:18,0:12:11.07:0,11,74	0/0:25,0:25:30.49:0,30,286	0/0:22,0:24:1.10:0,1,279	0/0:19,0:19:36.10:0,36,262	0/0:30,0:26:17.42:0,17,124	0/0:12,0:12:3.08:0,3,139	0/0:32,0:32:32.66:0,33,440	0/0:25,0:25:10.80:0,11,240	0/0:18,0:19:37.58:0,38,284	0/0:19,0:20:11.63:0,12,199	0/0:12,0:12:11.50:0,12,86	1/1:15,1:16:7.10:132,7,0	1/1:15,6:22:13.98:242,14,0	1/1:16,4:20:24.49:142,24,0	0/1:10,3:13:17.97:84,0,18	0/0:24,0:25:37.33:0,37,387	0/0:22,0:22:41.86:0,42,352	0/0:12,0:11:11.95:0,12,116	0/0:16,0:16:21.48:0,21,190	0/1:24,2:26:34.85:35,0,250	0/0:21,0:22:25.95:0,26,324	1/1:6,3:11:17.37:113,17,0	1/1:17,2:24:23.87:141,24,0	1/1:29,2:30:9.82:221,10,0	1/1:6,9:14:11.87:82,12,0
chr10	5274576	.	TACACACACACAC	T	1233.24	PASS	AB=0.750;AC=7;AF=0.140;AN=50;BaseQRankSum=6.354;DP=606;FS=1.200;HRun=0;HaplotypeScore=211.4833;InbreedingCoeff=0.6446;MQ=56.68;MQ0=9;MQRankSum=-5.979;QD=13.55;ReadPosRankSum=1.585;VQSLOD=2.4983;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:5,0:6:12.04:0,12,447	./.	./.	0/0:11,0:11:12.04:0,12,558	0/0:14,0:14:24.08:0,24,1196	0/0:26,0:28:39.13:0,39,1759	0/0:25,0:25:12.85:0,13,161	0/0:20,0:20:24.07:0,24,804	0/0:11,0:10:18.06:0,18,829	0/0:12,0:12:12.04:0,12,461	0/0:31,0:33:28.36:0,28,1577	0/0:22,0:24:30.10:0,30,1301	0/0:20,0:20:27.56:0,28,1213	1/1:16,12:28:9.03:309,9,0	0/0:26,0:26:48.08:0,48,1665	1/1:15,5:20:6.02:177,6,0	0/1:14,7:21:55.16:585,0,55	0/0:21,0:21:30.62:0,31,1041	0/0:11,0:11:3.01:0,3,174	0/0:58,0:64:84.27:0,84,3677	0/0:22,0:22:21.07:0,21,1033	0/0:15,0:15:15.05:0,15,757	0/0:25,0:28:51.16:0,51,2552	1/1:13,9:21:9.03:290,9,0	0/0:21,0:23:37.66:0,38,1079	0/0:11,0:12:15.05:0,15,535	0/0:3,0:4:7.16:0,7,90
chr10	5274886	.	C	CT	4239.29	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=13.885;DP=704;FS=4.104;HRun=3;HaplotypeScore=77.4343;InbreedingCoeff=0.9979;MQ=83.40;MQ0=0;MQRankSum=-4.667;QD=38.19;ReadPosRankSum=3.094;VQSLOD=5.2172;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,144,1716	0/0:6,0:6:18.06:0,18,216	0/0:26,0:26:72.22:0,72,861	0/0:25,0:25:58.76:0,59,736	0/0:14,0:14:36.11:0,36,431	0/0:27,0:27:78.24:0,78,936	0/0:37,0:37:99:0,105,1256	0/0:24,0:24:69.20:0,69,818	0/0:25,0:25:69.21:0,69,828	0/0:26,0:26:78.24:0,78,933	0/0:14,0:14:42.13:0,42,502	0/0:36,0:36:93.27:0,93,1105	0/0:25,0:25:75.21:0,75,886	0/0:26,0:26:75.23:0,75,898	1/1:0,31:31:87.29:1218,87,0	1/1:2,13:15:33.11:462,33,0	1/1:1,24:25:69.23:966,69,0	1/1:1,21:22:63.21:882,63,0	0/0:22,0:22:51.13:0,51,597	0/0:13,0:13:30.09:0,30,360	0/0:68,0:68:99:0,190,2243	0/0:19,0:19:54.17:0,54,647	0/0:15,0:15:42.10:0,42,481	0/0:37,0:36:99:0,108,1283	1/1:2,16:18:51.17:710,51,0	0/0:25,0:25:69.21:0,69,828	0/0:16,0:16:48.15:0,48,576	0/0:13,0:13:36.11:0,36,432
chr10	5278038	.	T	TTA	1805.25	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=11.834;DP=606;FS=5.020;HRun=0;HaplotypeScore=98.6313;InbreedingCoeff=0.9745;MQ=64.37;MQ0=22;MQRankSum=-6.707;QD=15.17;ReadPosRankSum=-2.287;VQSLOD=2.9620;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:17:40.65:413,41,0	0/0:6,0:6:18.06:0,18,294	0/0:42,0:21:57.12:0,57,863	0/0:60,0:15:25.15:0,25,357	0/0:31,0:31:81.23:0,81,1292	0/0:18,0:17:42.14:0,42,679	0/0:19,0:19:54.18:0,54,883	1/1:29,0:30:58.11:575,58,0	0/0:19,0:19:51.04:0,51,821	0/0:29,0:27:78.27:0,78,1255	0/0:23,0:23:57.19:0,57,920	0/0:17,0:17:48.15:0,48,764	0/0:18,0:18:48.16:0,48,778	0/0:17,0:15:41.66:0,42,672	1/1:13,0:13:7.75:127,8,0	1/1:4,13:15:11.36:80,11,0	1/1:15,0:15:34.68:297,35,0	1/1:9,0:9:15.74:154,16,0	0/0:17,0:17:44.31:0,44,598	0/0:22,0:22:63.20:0,63,974	0/0:25,0:25:54.17:0,54,853	0/0:18,0:18:51.16:0,51,808	0/0:23,0:23:63.22:0,63,1027	0/0:26,0:25:66.22:0,66,1061	1/1:18,0:18:41.77:354,42,0	0/0:28,0:27:81.23:0,81,1196	0/0:21,0:22:38.02:0,38,504	0/0:7,0:7:21.06:0,21,294
chr10	5278039	.	GTC	G	559.68	PASS	AB=0.946;AC=12;AF=0.214;AN=56;BaseQRankSum=4.396;DP=609;FS=5.000;HRun=0;HaplotypeScore=98.2597;InbreedingCoeff=0.1511;MQ=63.12;MQ0=23;MQRankSum=0.208;QD=2.84;ReadPosRankSum=0.654;VQSLOD=1.3954;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:1.75:0,2,4	0/0:6,0:6:9.02:0,9,113	0/0:42,0:21:6.02:0,6,85	0/0:59,0:14:10.46:0,10,59	0/0:33,0:33:45:0,45,478	0/0:18,0:17:18.06:0,18,258	0/0:22,0:21:24.62:0,25,438	0/1:30,0:30:6.88:7,0,194	0/0:19,0:19:28.11:0,28,342	0/1:29,0:27:19.60:20,0,564	0/1:23,0:23:18.78:19,0,177	0/0:16,0:16:15.24:0,15,363	0/0:20,0:20:32.82:0,33,430	0/0:17,0:15:30.08:0,30,409	0/0:13,0:13:2.99:0,3,24	0/0:17,0:15:3:0,3,25	0/0:15,0:15:2.87:0,3,18	1/1:9,0:9:0.94:2,1,0	0/0:16,0:16:27.99:0,28,315	0/1:21,0:21:48.24:48,0,111	0/0:24,0:24:29.34:0,29,360	0/0:17,0:17:14.98:0,15,140	0/0:23,0:23:36.04:0,36,423	0/1:27,0:26:48.42:48,0,544	0/0:18,0:18:0.47:0,0,1	1/1:13,17:28:0.04:396,0,0	0/1:11,10:21:8.02:56,0,8	1/1:7,0:7:9.02:99,9,0
chr10	5278074	.	T	TA	76.39	PASS	AB=0.938;AC=4;AF=0.074;AN=54;BaseQRankSum=4.039;DP=496;FS=1.651;HRun=0;HaplotypeScore=80.2125;InbreedingCoeff=0.3205;MQ=42.40;MQ0=64;MQRankSum=-3.152;QD=1.96;ReadPosRankSum=0.907;VQSLOD=2.2881;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:18:36.12:0,36,487	0/0:3,0:3:6.02:0,6,83	./.	0/0:27,0:3:5.91:0,6,57	0/0:14,0:12:15.02:0,15,174	0/0:12,0:11:18.01:0,18,229	0/0:27,0:20:42.50:0,43,535	0/0:10,0:7:12.04:0,12,159	0/0:13,0:11:18.06:0,18,245	0/0:26,0:19:57.19:0,57,784	0/0:15,0:14:18.06:0,18,247	0/0:16,0:15:42.13:0,42,565	0/0:15,0:15:36.59:0,37,501	0/0:18,0:16:38.93:0,39,527	0/1:12,2:12:21.62:22,0,36	1/1:4,5:6:11.78:150,12,0	0/1:16,0:13:9.38:9,0,90	0/0:9,0:6:18.04:0,18,221	0/0:15,0:13:39.13:0,39,535	0/0:7,0:7:6.02:0,6,83	0/0:33,0:24:27.40:0,27,355	0/0:18,0:17:18.03:0,18,216	0/0:14,0:14:17.99:0,18,222	0/0:41,0:36:75.23:0,75,1004	0/0:15,1:15:3.95:0,4,43	0/0:38,0:31:87.92:0,88,1083	0/0:24,0:22:33:0,33,405	0/0:11,0:9:24.53:0,25,289
chr10	5278409	.	T	TC	5320.93	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-12.209;DP=798;FS=8.228;HRun=0;HaplotypeScore=75.8596;InbreedingCoeff=0.9997;MQ=80.47;MQ0=0;MQRankSum=-4.199;QD=44.34;ReadPosRankSum=2.583;VQSLOD=5.1013;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,154,2132	0/0:9,0:9:27.09:0,27,378	0/0:33,0:33:93.21:0,93,1259	0/0:42,0:41:99:0,123,1599	0/0:32,0:32:96.30:0,96,1321	0/0:15,0:15:45.15:0,45,629	0/0:33,0:33:96.32:0,96,1341	0/0:27,0:27:78.26:0,78,1088	0/0:27,0:27:81.24:0,81,1096	0/0:42,0:42:99:0,123,1706	0/0:21,0:21:56.96:0,57,796	0/0:27,0:27:81.25:0,81,1114	0/0:27,0:27:81.27:0,81,1133	0/0:24,0:24:72.24:0,72,1005	1/1:0,38:38:99:1773,111,0	0/0:26,0:26:75.23:0,75,1016	1/1:1,35:36:99:1582,99,0	1/1:0,27:27:72.25:1151,72,0	0/0:18,0:18:51.14:0,51,676	0/0:18,0:18:51.11:0,51,674	0/0:43,0:43:99:0,126,1762	0/0:36,0:36:99:0,99,1366	0/0:22,0:22:63.21:0,63,881	0/0:36,0:36:99:0,105,1469	1/1:0,19:19:51.17:815,51,0	0/0:30,0:30:87.29:0,87,1214	0/0:24,0:24:72.24:0,72,1002	0/0:14,0:14:42.14:0,42,582
chr10	5279051	.	CCT	C	6824.15	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=13.338;DP=684;FS=7.063;HRun=0;HaplotypeScore=82.7610;InbreedingCoeff=0.9997;MQ=88.98;MQ0=1;MQRankSum=-1.776;QD=37.09;ReadPosRankSum=2.741;VQSLOD=6.9506;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,25:26:63.21:926,63,0	0/0:14,0:14:42.14:0,42,757	0/0:28,0:28:74.95:0,75,1246	0/0:22,1:22:57.12:0,57,909	0/0:15,0:15:33.11:0,33,600	0/0:18,0:18:54.19:0,54,994	0/0:28,0:28:81.26:0,81,1485	1/1:3,28:31:84.20:1179,84,0	0/0:18,0:18:51.17:0,51,928	0/0:29,0:29:87.25:0,87,1561	0/0:20,0:20:60.19:0,60,1071	0/0:28,0:28:84.27:0,84,1539	0/0:21,0:21:60.18:0,60,1064	0/0:23,0:23:69.22:0,69,1253	1/1:0,22:22:54.18:795,54,0	1/1:0,17:16:39.13:574,39,0	1/1:1,38:39:96.32:1414,96,0	1/1:0,27:27:81.27:1187,81,0	0/0:11,0:11:30.10:0,30,535	0/0:19,0:19:48.15:0,48,868	0/0:66,0:66:99:0,199,3573	0/0:15,0:15:42.14:0,42,779	0/0:11,0:11:30.10:0,30,553	0/0:40,0:40:99:0,120,2234	1/1:0,22:22:51.17:749,51,0	0/0:33,0:32:99:0,99,1801	0/0:26,0:26:72.23:0,72,1307	0/0:14,0:14:42.14:0,42,787
chr10	5279759	.	T	TGTG	10737.23	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-14.089;DP=644;FS=3.933;HRun=0;HaplotypeScore=85.5427;InbreedingCoeff=0.9445;MQ=95.64;MQ0=0;MQRankSum=-5.237;QD=58.35;ReadPosRankSum=3.914;VQSLOD=7.1728;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,25:31:75.21:1672,75,0	0/0:8,0:8:21.07:0,21,343	0/0:42,0:42:93.06:0,93,1796	0/0:20,0:20:57.16:0,57,891	0/0:22,0:22:57.18:0,57,945	0/0:17,0:17:48.16:0,48,819	0/0:24,0:24:72.22:0,72,1176	1/1:4,19:25:72.22:1505,72,0	0/0:18,0:18:54.18:0,54,920	0/0:12,0:12:36.12:0,36,613	0/0:10,0:10:27.09:0,27,454	0/0:28,0:28:81.25:0,81,1322	0/0:23,0:23:69.24:0,69,1168	0/0:31,0:31:84.26:0,84,1378	1/1:1,23:24:60.21:1383,60,0	1/1:2,17:19:0:1054,0,0	1/1:2,33:35:93.32:2099,93,0	1/1:2,33:35:99:2335,102,0	0/0:32,0:32:87.29:0,87,1458	0/0:13,0:12:36.11:0,36,584	0/0:40,0:40:99:0,117,1906	0/0:26,0:26:66.21:0,66,1096	0/0:17,0:17:42.10:0,42,637	0/0:31,0:31:87.30:0,87,1474	1/1:1,12:14:30.10:689,30,0	0/0:24,0:24:69.22:0,69,1127	0/0:18,0:18:54.17:0,54,890	0/0:4,0:4:12.04:0,12,205
chr10	5280805	.	CTACTTGAGTTTGATCG	C	4230.89	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=10.017;DP=747;FS=3.993;HRun=0;HaplotypeScore=322.0964;InbreedingCoeff=0.9813;MQ=92.13;MQ0=0;MQRankSum=-6.099;QD=81.36;ReadPosRankSum=-2.398;VQSLOD=3.2876;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,20:23:54.19:2458,54,0	0/0:8,0:8:24.06:0,24,1701	0/0:33,0:33:90.78:0,91,5596	0/0:33,0:33:84.26:0,84,4588	0/0:18,0:18:54.17:0,54,3999	0/0:25,0:25:75.26:0,75,5481	0/0:30,0:30:87.30:0,87,6222	1/1:10,19:29:54.14:1773,54,0	0/0:35,0:35:99:0,105,8217	0/0:18,0:18:54.19:0,54,3748	0/0:7,0:7:21.07:0,21,1470	0/0:39,0:39:99:0,117,8715	0/0:28,0:28:84.25:0,84,5635	0/0:23,0:23:69.24:0,69,5087	0/0:36,0:36:99:0,108,8039	0/0:20,0:20:57.20:0,57,3887	0/0:45,0:45:99:0,135,10472	0/0:27,0:27:81.28:0,81,5957	0/0:17,0:17:45.15:0,45,2855	0/0:21,0:21:60.21:0,60,3999	0/0:70,0:70:99:0,202,14670	0/0:24,0:24:69.24:0,69,4738	0/0:19,0:19:57.20:0,57,4083	0/0:37,0:37:99:0,108,7982	0/0:20,0:20:60.21:0,60,4686	0/0:31,0:31:90.31:0,90,5995	0/0:27,0:27:81.28:0,81,6441	0/0:4,0:4:12.04:0,12,899
chr10	5284701	.	A	AG	286.41	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-4.282;DP=570;FS=4.141;HRun=8;HaplotypeScore=71.3081;InbreedingCoeff=0.8077;MQ=76.79;MQ0=0;MQRankSum=-1.609;QD=16.85;ReadPosRankSum=1.558;VQSLOD=3.8124;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,99,898	0/0:8,0:8:14.99:0,15,137	0/0:17,0:15:30:0,30,272	0/0:27,1:27:1.56:0,2,406	0/0:17,0:17:45.02:0,45,412	0/0:15,0:14:39.02:0,39,357	0/0:28,0:28:75.04:0,75,686	0/0:25,0:25:23.95:0,24,219	0/0:22,0:22:57:0,57,516	0/0:22,0:22:39:0,39,357	0/0:13,0:13:36.02:0,36,329	0/0:23,0:23:57.02:0,57,522	0/0:16,0:16:41.99:0,42,377	0/0:19,0:19:45.01:0,45,411	0/0:31,0:31:80.99:0,81,741	1/1:5,12:17:33.10:381,33,0	0/0:31,0:31:81.01:0,81,741	0/0:12,0:12:29.99:0,30,274	0/0:18,0:18:42.01:0,42,384	0/0:14,0:14:36:0,36,325	0/0:36,0:36:90.81:0,91,803	0/0:17,0:18:47.05:0,47,418	0/0:15,0:15:39.01:0,39,356	0/0:16,0:18:46.08:0,46,391	0/0:18,0:18:48.02:0,48,438	0/0:20,0:20:54.03:0,54,494	0/0:17,0:17:45:0,45,407	0/0:12,0:12:30:0,30,274
chr10	5285008	.	T	TAC	641.36	PASS	AB=0.856;AC=8;AF=0.154;AN=52;BaseQRankSum=2.588;DP=628;FS=3.639;HRun=0;HaplotypeScore=114.5534;InbreedingCoeff=0.0434;MQ=66.22;MQ0=13;MQRankSum=-1.896;QD=4.36;ReadPosRankSum=-0.718;VQSLOD=2.7909;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:25:3.73:145,4,0	0/0:9,0:9:17.25:0,17,141	./.	./.	0/0:25,0:25:24.06:0,24,261	0/0:20,0:20:7.77:0,8,241	0/0:27,0:30:52.63:0,53,516	0/0:23,0:22:2.68:0,3,11	0/0:18,0:18:23.95:0,24,232	0/0:23,0:22:30.89:0,31,281	0/0:10,0:10:5.85:0,6,48	0/0:24,0:25:25.71:0,26,251	0/0:10,0:11:26.84:0,27,262	0/0:13,0:13:11.91:0,12,114	0/1:23,0:23:29.08:62,0,29	0/0:11,0:11:4.37:0,4,25	0/0:31,0:31:0.53:0,1,47	0/1:18,0:17:8.80:9,0,16	0/0:11,0:12:10.41:0,10,65	0/1:23,0:23:10.12:10,0,92	0/0:41,1:41:0.51:0,1,369	0/0:19,0:19:26.01:0,26,286	0/0:21,0:21:32.87:0,33,340	0/0:40,0:42:53.78:0,54,535	0/0:9,0:9:2.84:0,3,14	0/1:17,10:27:25.09:417,0,25	0/1:14,9:23:1.05:82,0,1	0/1:4,3:7:27.36:39,0,27
chr10	5285034	.	CACACACACAT	C	1471.97	PASS	AB=0.989;AC=9;AF=0.161;AN=56;BaseQRankSum=5.899;DP=698;FS=25.114;HRun=0;HaplotypeScore=194.0007;InbreedingCoeff=0.2600;MQ=53.96;MQ0=15;MQRankSum=-2.055;QD=9.62;ReadPosRankSum=-1.973;VQSLOD=0.3290;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:31,0:31:39.33:39,0,791	0/0:11,0:11:30.05:0,30,726	0/0:34,0:11:0.40:0,0,194	0/0:47,0:21:30.83:0,31,550	0/0:20,0:20:33.10:0,33,1111	0/0:24,0:24:45.01:0,45,1450	0/0:34,0:34:74.63:0,75,2705	0/1:28,0:27:99:298,0,195	0/0:19,0:19:48.09:0,48,1454	0/0:24,0:23:42.36:0,42,1608	0/0:9,0:9:17.63:0,18,448	0/0:35,0:35:69:0,69,2028	0/0:23,0:23:57.13:0,57,1708	0/0:18,0:18:31.63:0,32,950	1/1:12,7:19:9.95:750,10,0	0/1:15,0:15:15.97:68,0,16	0/1:28,0:28:5.70:205,0,6	0/1:17,1:16:99:157,0,131	0/0:16,0:16:44.67:0,45,739	0/0:20,0:20:28.50:0,29,780	0/0:52,0:50:99:0,107,2685	0/0:22,0:22:53.10:0,53,1729	0/0:29,0:29:57.16:0,57,2146	0/0:45,0:45:99:0,105,3118	1/1:5,9:14:3.01:95,3,0	0/0:34,0:34:83.78:0,84,1780	0/0:24,0:23:32.62:0,33,686	0/0:5,0:5:9.01:0,9,253
chr10	5285036	.	CACACACAT	C	1650.08	PASS	AB=1.000;AC=12;AF=0.214;AN=56;BaseQRankSum=5.703;DP=697;FS=24.061;HRun=0;HaplotypeScore=172.8764;InbreedingCoeff=0.5083;MQ=54.25;MQ0=14;MQRankSum=-2.105;QD=8.78;ReadPosRankSum=-2.126;VQSLOD=1.0906;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:31,0:31:60.29:60,0,644	0/0:11,0:11:30.03:0,30,583	0/1:38,0:16:9.27:9,0,263	0/0:44,0:19:29.30:0,29,404	0/0:17,0:17:30.10:0,30,905	0/0:24,0:24:45.01:0,45,1286	0/0:33,0:33:74.58:0,75,2241	0/1:26,0:26:58.48:327,0,58	0/0:20,0:20:47.68:0,48,1208	0/0:24,0:23:41.06:0,41,1369	0/0:9,0:9:17.63:0,18,379	0/0:34,0:34:72:0,72,1740	0/0:24,0:24:57.12:0,57,1462	0/0:18,0:18:31.07:0,31,839	1/1:19,1:20:36:564,36,0	1/1:15,0:15:23.86:230,24,0	1/1:5,22:27:9.09:399,9,0	0/1:18,0:16:78.14:163,0,78	0/0:15,0:15:34.24:0,34,546	0/0:19,0:19:9.07:0,9,624	0/0:56,0:54:99:0,116,2336	0/0:22,0:22:53.10:0,53,1494	0/0:29,0:29:60.15:0,60,1886	0/0:45,0:45:97.53:0,98,2551	1/1:13,0:13:3.01:61,3,0	0/0:34,0:34:85.06:0,85,1735	0/0:25,0:24:32.82:0,33,619	0/0:6,0:6:11.99:0,12,268
chr10	5285038	.	CACACAT	C	1517.92	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=5.465;DP=707;FS=19.279;HRun=0;HaplotypeScore=154.7891;InbreedingCoeff=0.6520;MQ=56.89;MQ0=14;MQRankSum=-2.723;QD=8.03;ReadPosRankSum=-1.386;VQSLOD=1.4686;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:31,0:31:86.89:87,0,445	0/0:11,0:11:29.93:0,30,425	0/1:38,0:17:8.03:8,0,263	0/0:46,0:21:17.79:0,18,340	0/0:16,0:16:30.10:0,30,723	0/0:24,0:24:45:0,45,1059	0/0:33,0:33:80.56:0,81,1831	1/1:26,0:26:26.05:400,26,0	0/0:19,0:19:50.67:0,51,1058	0/0:24,0:23:39.95:0,40,1099	0/0:8,0:8:17.63:0,18,312	0/0:34,0:34:74.89:0,75,1396	0/0:24,0:24:56.60:0,57,1244	0/0:18,0:18:31.92:0,32,662	1/1:20,0:21:36.65:428,37,0	1/1:10,4:14:24:355,24,0	1/1:27,0:27:13.75:239,14,0	0/1:18,0:16:60:130,0,60	0/0:15,0:15:34.77:0,35,456	0/0:18,0:18:9.06:0,9,522	0/0:58,0:56:99:0,122,1930	0/0:23,0:23:56.02:0,56,1179	0/0:30,0:30:63.15:0,63,1516	0/0:46,0:46:80.23:0,80,2041	1/1:13,0:13:3.01:47,3,0	0/0:35,0:35:84.57:0,85,1440	0/0:28,0:27:41.74:0,42,547	0/0:8,0:8:17.98:0,18,282
chr10	5285042	.	CAT	C	1269.28	PASS	AB=1.000;AC=16;AF=0.286;AN=56;BaseQRankSum=6.467;DP=695;FS=0.839;HRun=0;HaplotypeScore=109.5970;InbreedingCoeff=0.6082;MQ=60.41;MQ0=13;MQRankSum=-2.519;QD=5.88;ReadPosRankSum=-0.220;VQSLOD=3.0607;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:31,0:31:14.60:177,0,15	0/0:10,0:10:3.06:0,3,210	0/1:40,0:20:5.77:6,0,295	0/0:44,0:20:30.39:0,30,310	0/0:16,0:16:35.93:0,36,417	0/0:23,0:23:47.81:0,48,613	0/0:30,0:30:37.34:0,37,880	1/1:2,22:24:62.79:521,63,0	0/0:18,0:18:31.54:0,32,553	0/0:22,0:21:37.79:0,38,549	0/0:8,0:8:11.56:0,12,180	0/0:32,0:32:44.72:0,45,665	0/0:25,0:25:56.80:0,57,582	0/0:18,0:18:35.31:0,35,301	1/1:19,0:19:38.32:255,38,0	1/1:14,1:15:29.19:216,29,0	1/1:23,0:23:17.54:116,18,0	1/1:15,0:15:8.37:123,8,0	0/1:17,0:17:12.83:13,0,243	0/1:19,0:19:4.09:4,0,316	0/0:60,0:59:72.84:0,73,1093	0/0:23,0:23:55.94:0,56,672	0/0:29,0:29:68.61:0,69,827	0/0:49,0:49:10.81:0,11,1116	1/1:11,0:11:2.96:19,3,0	0/0:35,0:35:48.48:0,48,768	0/0:27,0:26:36.40:0,36,360	0/0:9,0:9:20.97:0,21,209
chr10	5285144	.	TAC	T	1741.87	PASS	AB=0.976;AC=5;AF=0.089;AN=56;BaseQRankSum=6.583;DP=709;FS=8.055;HRun=0;HaplotypeScore=110.1134;InbreedingCoeff=0.7287;MQ=64.26;MQ0=5;MQRankSum=-1.247;QD=15.15;ReadPosRankSum=-1.227;VQSLOD=2.8299;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,35:43:87.27:1078,87,0	0/0:8,0:8:15.05:0,15,244	0/1:40,1:24:18.98:19,0,336	0/0:46,0:28:21.55:0,22,604	0/0:19,0:19:45.15:0,45,731	0/0:25,0:25:63.19:0,63,998	0/0:36,0:36:84.25:0,84,1312	1/1:8,23:31:66.14:774,66,0	0/0:21,1:22:7.96:0,8,620	0/0:19,0:18:41.77:0,42,683	0/0:14,0:14:42.14:0,42,682	0/0:22,0:22:54.11:0,54,783	0/0:21,0:21:53.85:0,54,847	0/0:17,0:17:39.11:0,39,613	0/0:35,0:35:81.23:0,81,1249	0/0:18,0:18:39.13:0,39,639	0/0:21,0:21:36.07:0,36,558	0/0:21,0:19:45.10:0,45,668	0/0:17,0:16:33.11:0,33,524	0/0:26,0:26:72.24:0,72,1156	0/0:61,2:63:64.11:0,64,2061	0/0:16,1:17:7.98:0,8,651	0/0:17,0:17:39.13:0,39,626	0/0:33,0:33:87.28:0,87,1399	0/0:24,0:24:48.16:0,48,781	0/0:20,0:20:54.18:0,54,885	0/0:17,0:17:33.11:0,33,540	0/0:16,0:16:33.11:0,33,526
chr10	5285188	.	TACACAC	T	2608.13	PASS	AB=0.691;AC=17;AF=0.304;AN=56;BaseQRankSum=10.051;DP=703;FS=0.000;HRun=0;HaplotypeScore=169.2506;InbreedingCoeff=0.6798;MQ=51.37;MQ0=11;MQRankSum=-7.753;QD=11.49;ReadPosRankSum=0.182;VQSLOD=2.8859;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:37:29.55:387,30,0	0/0:12,0:12:24.08:0,24,703	0/0:28,0:9:3.01:0,3,48	0/0:41,0:17:6.02:0,6,76	0/0:19,0:20:33.04:0,33,809	0/0:18,0:21:32.18:0,32,851	0/0:24,0:29:38.33:0,38,973	1/1:27,1:29:23.08:282,23,0	0/0:20,0:21:30.10:0,30,840	0/0:21,0:20:44.41:0,44,1182	0/0:11,0:12:20.16:0,20,571	0/0:28,0:31:69.20:0,69,1631	0/0:22,0:25:45.15:0,45,1207	0/0:25,0:26:38.18:0,38,985	1/1:12,12:29:43.03:789,43,0	1/1:6,0:14:15.05:210,15,0	1/1:9,0:17:18.06:239,18,0	0/1:15,7:22:94.55:210,0,95	0/0:16,0:15:14.23:0,14,243	0/0:19,0:19:38.16:0,38,1038	0/0:64,0:71:99:0,102,2799	0/0:16,0:17:27.09:0,27,642	0/0:21,0:21:39.13:0,39,1238	0/0:40,0:43:90.31:0,90,2520	1/1:7,12:21:30.06:537,30,0	0/1:12,1:20:81.57:82,0,126	0/1:9,1:23:28.17:57,0,28	1/1:4,0:13:6.20:12,6,0
chr10	5289099	.	A	AAAG	1007.68	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=-1.122;DP=459;FS=3.252;HRun=0;HaplotypeScore=98.6024;InbreedingCoeff=0.6638;MQ=57.43;MQ0=16;MQRankSum=-1.541;QD=18.32;ReadPosRankSum=0.042;VQSLOD=2.9198;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:19,17:33:71.82:1102,72,0	0/0:13,0:12:34.18:0,34,389	0/0:25,0:6:8.76:0,9,55	0/1:19,0:9:2.22:2,0,58	0/0:16,0:15:29.66:0,30,287	0/0:17,0:16:44.23:0,44,424	0/0:14,0:13:23.94:0,24,290	0/0:27,0:27:43.75:0,44,453	0/0:14,0:14:30:0,30,355	0/0:14,0:14:34.37:0,34,302	0/0:11,0:11:32.96:0,33,396	0/0:8,0:8:16.85:0,17,162	0/0:6,0:5:12.02:0,12,139	0/0:8,0:8:17.69:0,18,140	0/0:15,0:13:23.81:0,24,186	0/0:18,0:16:44.11:0,44,454	0/0:27,0:25:35.18:0,35,444	0/0:26,0:24:52.41:0,52,502	0/0:11,0:10:33.03:0,33,363	0/0:11,0:11:18.51:0,19,255	0/0:6,0:6:12.19:0,12,142	0/0:11,0:10:26.99:0,27,295	0/0:12,0:11:21.88:0,22,254	0/0:30,0:28:64.01:0,64,635	0/0:14,0:14:41.11:0,41,387	0/0:16,0:16:35.94:0,36,404	0/0:18,0:17:25.89:0,26,234	0/0:16,0:14:26.97:0,27,258
chr10	5289158	.	CCCG	C	810.15	PASS	AB=1.000;AC=10;AF=0.179;AN=56;BaseQRankSum=6.312;DP=435;FS=22.449;HRun=0;HaplotypeScore=87.3195;InbreedingCoeff=0.7408;MQ=75.93;MQ0=0;MQRankSum=-4.291;QD=6.92;ReadPosRankSum=-2.021;VQSLOD=0.7607;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:27:54.28:287,54,0	0/0:13,0:13:15.06:0,15,630	0/0:10,0:10:23.86:0,24,377	0/0:15,0:15:26.41:0,26,327	0/0:17,0:17:48.16:0,48,966	0/0:15,0:15:45.11:0,45,874	0/0:20,0:20:57.15:0,57,1139	1/1:12,0:12:10.36:129,10,0	0/0:22,0:22:66.14:0,66,1239	0/0:14,0:14:36.11:0,36,720	0/0:13,0:13:36.04:0,36,669	0/0:14,0:14:42.10:0,42,838	0/0:12,0:12:32.80:0,33,567	0/0:15,0:15:45.15:0,45,895	0/0:13,0:13:24.28:0,24,203	1/1:10,5:15:38.34:339,38,0	1/1:27,1:28:21.99:149,22,0	0/1:19,0:19:54.23:54,0,194	0/0:11,0:11:33.08:0,33,635	0/0:13,0:13:32.91:0,33,637	0/0:18,0:18:51.07:0,51,920	0/0:14,0:14:42.14:0,42,837	0/0:11,0:11:33.10:0,33,642	0/0:18,0:18:51.07:0,51,872	0/1:16,0:16:17.99:18,0,179	0/0:12,0:12:36.12:0,36,696	0/0:17,0:17:48.15:0,48,962	0/0:11,0:11:33.09:0,33,626
chr10	5289159	.	CCG	C	1550.88	PASS	AB=1.000;AC=12;AF=0.214;AN=56;BaseQRankSum=7.018;DP=444;FS=12.423;HRun=0;HaplotypeScore=78.1550;InbreedingCoeff=0.6169;MQ=74.74;MQ0=0;MQRankSum=-3.713;QD=10.70;ReadPosRankSum=-3.800;VQSLOD=1.3876;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:27:65.74:520,66,0	0/1:13,0:13:0.80:1,0,488	0/0:11,0:11:26.78:0,27,335	0/0:14,0:14:21.85:0,22,235	0/0:19,0:19:54.12:0,54,815	0/0:15,0:15:45.09:0,45,697	0/0:21,0:21:60.11:0,60,934	1/1:12,0:12:27.96:205,28,0	0/0:22,0:22:66.08:0,66,976	0/0:14,0:14:39.08:0,39,606	0/0:14,0:14:39.04:0,39,569	0/0:15,0:15:45.07:0,45,699	0/0:12,0:12:32.80:0,33,472	0/0:15,0:15:45.11:0,45,711	0/1:14,0:14:12.03:12,0,56	1/1:13,3:16:47.91:464,48,0	1/1:25,3:28:29.62:320,30,0	0/1:19,0:19:30.43:143,0,30	0/0:11,0:11:32.70:0,33,495	0/0:13,0:13:32.54:0,33,514	0/0:18,0:18:51.07:0,51,758	0/0:15,0:15:45.10:0,45,683	0/0:11,0:11:33.10:0,33,517	0/0:19,0:19:53.17:0,53,690	0/1:16,0:16:55.60:57,0,56	0/0:12,0:12:36.07:0,36,537	0/0:17,0:17:48.14:0,48,775	0/0:11,0:11:31.65:0,32,479
chr10	5289160	.	CG	C	2253.12	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=7.240;DP=448;FS=2.676;HRun=1;HaplotypeScore=68.1024;InbreedingCoeff=0.9506;MQ=74.71;MQ0=0;MQRankSum=-7.895;QD=17.07;ReadPosRankSum=-5.155;VQSLOD=2.2432;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,26:27:68.93:880,69,0	0/0:14,0:14:2.15:0,2,395	0/0:10,0:10:26.80:0,27,282	0/0:15,0:15:16.43:0,16,181	0/0:19,0:19:53.99:0,54,626	0/0:15,0:15:45.08:0,45,550	0/0:21,0:21:60.09:0,60,723	1/1:11,1:12:32.93:285,33,0	0/0:22,0:22:65.43:0,65,747	0/0:13,0:13:39.09:0,39,484	0/0:15,0:15:42.03:0,42,482	0/0:16,0:16:48.06:0,48,579	0/0:11,0:11:32.81:0,33,365	0/0:16,0:16:45.56:0,46,551	1/1:13,1:14:15.45:111,15,0	1/1:16,0:16:47.63:356,48,0	1/1:9,19:28:29.80:242,30,0	1/1:19,0:19:46.68:383,47,0	0/0:11,0:11:20.21:0,20,369	0/0:13,0:13:32.93:0,33,394	0/0:20,0:20:53.98:0,54,620	0/0:15,0:15:45.08:0,45,532	0/0:11,0:11:33.07:0,33,403	0/0:19,0:19:37.91:0,38,506	1/1:15,1:16:16.40:191,16,0	0/0:12,0:12:29.09:0,29,394	0/0:17,0:17:48.14:0,48,605	0/0:11,0:11:11.86:0,12,321
chr10	5289322	.	GC	G	722.84	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.799;DP=613;FS=6.958;HRun=3;HaplotypeScore=66.4433;InbreedingCoeff=0.9509;MQ=85.46;MQ0=0;MQRankSum=-0.651;QD=23.32;ReadPosRankSum=1.033;VQSLOD=2.6560;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,29:31:66.21:818,66,0	0/0:5,0:5:15.05:0,15,214	0/0:22,0:22:63.14:0,63,858	0/0:23,0:23:60.44:0,60,865	0/0:17,0:17:39.12:0,39,559	0/0:17,0:17:51.16:0,51,717	0/0:38,0:38:96.31:0,96,1360	0/0:23,0:23:60.19:0,60,848	0/0:36,0:36:99:0,105,1487	0/0:14,0:14:39.12:0,39,530	0/0:9,0:9:24.08:0,24,346	0/0:25,0:25:75.25:0,75,1079	0/0:22,0:22:66.20:0,66,914	0/0:25,0:25:72.22:0,72,1017	0/0:19,0:19:54.16:0,54,744	0/0:23,0:23:66.15:0,66,891	0/0:33,0:33:96.26:0,96,1335	0/0:22,0:22:66.21:0,66,928	0/0:19,0:19:54.17:0,54,759	0/0:5,0:5:12.04:0,12,173	0/0:39,0:39:99:0,111,1597	0/0:8,0:8:24.05:0,24,324	0/0:10,0:10:27.09:0,27,388	0/0:41,0:41:99:0,123,1742	0/0:22,0:22:60.18:0,60,843	0/0:27,0:27:72.22:0,72,1001	0/0:24,0:24:63.19:0,63,870	0/0:14,0:14:42.14:0,42,605
chr10	5289907	.	AT	A	194.99	PASS	AB=0.529;AC=1;AF=0.018;AN=56;BaseQRankSum=2.999;DP=573;FS=0.000;HRun=1;HaplotypeScore=58.0375;InbreedingCoeff=-0.0154;MQ=90.26;MQ0=0;MQRankSum=-0.424;QD=21.67;ReadPosRankSum=1.418;VQSLOD=3.6808;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,111,1664	0/0:6,0:6:18.06:0,18,287	0/0:26,0:26:65.41:0,65,1075	0/0:21,0:21:59.04:0,59,760	0/0:25,0:25:62.79:0,63,927	0/0:14,0:14:39.13:0,39,621	0/0:29,0:29:87.30:0,87,1385	0/0:14,0:14:42.11:0,42,599	0/0:18,0:18:54.14:0,54,792	0/0:21,0:21:59.97:0,60,900	0/0:15,0:15:45.15:0,45,716	0/0:20,0:20:60.20:0,60,955	0/0:24,0:24:72.18:0,72,1098	0/0:26,0:26:78.24:0,78,1199	0/0:18,0:18:54.18:0,54,862	0/1:1,8:9:23.83:269,0,24	0/0:41,0:41:99:0,123,1961	0/0:18,0:18:54.18:0,54,862	0/0:20,0:20:60.20:0,60,934	0/0:20,0:20:54.18:0,54,842	0/0:33,0:33:99:0,99,1508	0/0:15,0:15:45.14:0,45,689	0/0:16,0:16:48.13:0,48,714	0/0:20,0:20:60.19:0,60,934	0/0:19,0:19:57.18:0,57,875	0/0:19,0:19:54.18:0,54,862	0/0:27,0:27:81.26:0,81,1266	0/0:2,0:2:6.02:0,6,96
chr10	5290131	.	CA	C	3810.04	PASS	AB=0.950;AC=9;AF=0.161;AN=56;BaseQRankSum=10.955;DP=675;FS=1.824;HRun=1;HaplotypeScore=68.0448;InbreedingCoeff=0.8280;MQ=79.68;MQ0=0;MQRankSum=-0.831;QD=28.86;ReadPosRankSum=3.648;VQSLOD=3.5599;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:63,0:63:99:0,177,2473	0/0:10,0:10:30.10:0,30,455	0/1:18,1:19:33.47:33,0,507	0/0:16,0:16:26.93:0,27,347	0/0:24,0:24:69.22:0,69,1056	0/0:21,0:21:63.20:0,63,969	0/0:37,0:37:99:0,111,1683	0/0:28,0:28:84.23:0,84,1187	0/0:31,0:31:89.10:0,89,1351	0/0:22,0:22:66.07:0,66,935	0/0:14,0:14:36.01:0,36,491	0/0:22,1:23:66.10:0,66,871	0/0:26,0:26:70.40:0,70,1069	0/0:27,0:27:81.21:0,81,1177	1/1:0,32:33:90.28:1228,90,0	0/0:18,0:18:50.57:0,51,780	1/1:1,36:37:93.31:1286,93,0	1/1:0,26:26:66.20:891,66,0	0/0:17,0:17:51.13:0,51,722	0/0:13,0:13:39.13:0,39,612	0/0:33,0:33:99:0,99,1366	0/0:20,0:20:57.17:0,57,872	0/0:19,0:19:51.61:0,52,720	0/0:26,0:26:72.20:0,72,1056	1/1:0,17:17:27.09:372,27,0	0/0:31,0:31:88.43:0,88,1166	0/0:23,0:23:69.13:0,69,925	0/0:1,0:1:3.01:0,3,47
chr10	5290318	.	G	GA	301.14	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-2.959;DP=574;FS=4.978;HRun=9;HaplotypeScore=64.7110;InbreedingCoeff=0.7864;MQ=75.75;MQ0=1;MQRankSum=-1.882;QD=16.73;ReadPosRankSum=-3.714;VQSLOD=2.9758;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:89.96:0,90,781	0/0:1,0:1:3:0,3,26	0/0:27,0:20:32.75:0,33,273	0/0:23,0:22:19.80:0,20,243	0/0:11,0:11:23.97:0,24,204	0/0:19,0:19:44.96:0,45,390	0/0:32,0:32:77.95:0,78,677	1/1:6,11:18:38.88:396,39,0	0/0:25,0:25:56.96:0,57,495	0/0:21,0:21:62.99:0,63,547	0/0:13,0:13:32.99:0,33,286	0/0:18,0:18:44.98:0,45,391	0/0:18,1:19:9.90:0,10,260	0/0:23,0:23:50.96:0,51,443	0/0:27,0:27:65.97:0,66,573	0/0:20,0:20:44.99:0,45,391	0/0:42,0:42:99:0,107,917	0/0:28,0:28:65.96:0,66,573	0/0:13,0:13:32.98:0,33,287	0/0:15,0:15:29.98:0,30,260	0/0:27,0:27:56.97:0,57,495	0/0:20,0:20:24.39:0,24,321	0/0:11,0:11:25.02:0,25,231	0/0:29,0:29:55.22:0,55,605	0/0:15,0:15:41.99:0,42,365	0/0:20,0:20:53.99:0,54,469	0/0:11,0:11:23.97:0,24,204	0/0:4,0:4:12:0,12,104
chr10	5290417	.	G	GA	194.49	PASS	AB=0.969;AC=4;AF=0.071;AN=56;BaseQRankSum=6.991;DP=471;FS=5.890;HRun=0;HaplotypeScore=58.4318;InbreedingCoeff=0.4427;MQ=52.81;MQ0=12;MQRankSum=-6.650;QD=4.23;ReadPosRankSum=-3.255;VQSLOD=1.3515;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,3:15:34.75:284,35,0	0/0:4,0:4:12.04:0,12,168	0/0:33,1:8:18.06:0,18,245	0/0:43,0:11:27.94:0,28,345	0/0:13,0:13:39.13:0,39,544	0/0:15,0:15:45.15:0,45,629	0/0:30,2:30:80.68:0,81,1207	0/0:16,0:14:30.09:0,30,403	0/0:14,0:14:42.11:0,42,553	0/0:20,0:19:53.83:0,54,708	0/0:8,0:8:24.08:0,24,332	0/0:11,0:11:30.08:0,30,385	0/0:12,0:12:36.10:0,36,485	0/0:7,0:7:21.06:0,21,277	0/0:16,0:16:45.11:0,45,606	0/0:20,0:20:48.12:0,48,649	0/0:28,2:30:59.23:0,59,1005	0/1:14,1:14:13.56:14,0,385	0/0:10,0:8:24.07:0,24,311	0/0:12,0:12:36.11:0,36,487	0/0:36,0:36:91.81:0,92,1241	0/0:15,0:15:45.15:0,45,627	0/0:10,0:10:27.09:0,27,378	0/1:15,0:15:1.42:1,0,541	0/0:9,0:9:21.07:0,21,294	0/0:15,1:16:0.19:0,0,558	0/0:11,0:11:30.10:0,30,419	0/0:11,0:11:33.11:0,33,461
chr10	5290445	.	GGAGAAA	G	552.70	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=6.859;DP=374;FS=6.892;HRun=0;HaplotypeScore=70.3876;InbreedingCoeff=0.4833;MQ=48.44;MQ0=26;MQRankSum=-6.406;QD=17.83;ReadPosRankSum=0.234;VQSLOD=1.7000;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,6:17:37.44:623,37,0	0/0:2,0:2:3.01:0,3,100	0/0:35,0:7:18.06:0,18,387	0/0:40,0:3:8.96:0,9,191	0/0:10,0:10:21.07:0,21,694	0/0:11,0:10:27.09:0,27,873	0/0:26,0:25:64.68:0,65,1946	0/0:16,0:12:27.08:0,27,579	0/0:8,0:8:18.05:0,18,472	0/0:14,0:13:33.09:0,33,1011	0/0:5,0:5:9.03:0,9,294	0/0:9,0:8:18.06:0,18,569	0/0:7,0:7:18.06:0,18,550	0/0:6,0:5:15.05:0,15,500	0/0:12,0:11:24.08:0,24,749	0/0:7,0:7:18.05:0,18,493	0/0:21,0:20:36.57:0,37,1229	0/1:12,0:11:35.09:35,0,551	0/0:10,0:4:9.03:0,9,233	0/0:7,0:7:21.07:0,21,658	0/0:34,0:32:59.03:0,59,2276	0/0:10,0:8:24.04:0,24,589	0/0:11,0:11:30.09:0,30,883	0/0:9,0:9:27.05:0,27,707	0/0:7,0:7:15.05:0,15,476	0/0:11,0:10:26.28:0,26,752	0/0:7,0:7:21.07:0,21,607	0/0:7,0:7:21.07:0,21,503
chr10	5290448	.	GAAA	G	410.80	PASS	AB=0.958;AC=4;AF=0.071;AN=56;BaseQRankSum=7.110;DP=351;FS=4.235;HRun=3;HaplotypeScore=50.0206;InbreedingCoeff=0.4204;MQ=48.34;MQ0=26;MQRankSum=-6.625;QD=10.27;ReadPosRankSum=0.302;VQSLOD=-0.0043;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:15,3:16:39.48:485,39,0	0/0:1,0:1:3.01:0,3,74	0/0:34,0:6:18.06:0,18,387	0/0:39,0:3:9:0,9,170	0/0:8,0:7:21.07:0,21,496	0/0:10,0:9:27.09:0,27,622	0/0:25,0:25:57.60:0,58,1503	0/0:13,0:9:27.08:0,27,532	0/0:7,0:7:21.06:0,21,405	0/0:12,0:11:33.09:0,33,732	0/0:4,0:4:9.03:0,9,221	0/0:9,0:8:18.06:0,18,443	0/0:6,0:6:18.06:0,18,399	0/0:6,0:5:15.05:0,15,349	0/0:10,0:9:24.08:0,24,568	0/0:7,0:7:18.05:0,18,374	0/0:21,0:20:36.57:0,37,1017	0/1:10,1:10:31.08:31,0,434	0/0:10,0:4:12.04:0,12,236	0/0:7,0:7:21.07:0,21,473	0/0:32,0:30:71.57:0,72,1710	0/0:10,0:8:24.04:0,24,461	0/0:10,0:10:30.09:0,30,645	0/0:9,0:9:27.05:0,27,556	0/0:7,0:7:15.05:0,15,350	0/1:11,0:10:0.19:0,0,578	0/0:7,0:7:21.07:0,21,468	0/0:7,0:7:21:0,21,356
chr10	5290500	.	GA	G	232.84	PASS	AB=0.847;AC=6;AF=0.115;AN=52;BaseQRankSum=0.797;DP=268;FS=1.240;HRun=1;HaplotypeScore=36.6659;InbreedingCoeff=0.0808;MQ=42.02;MQ0=68;MQRankSum=-0.066;QD=4.66;ReadPosRankSum=-2.289;VQSLOD=-0.3052;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:18:32.06:0,32,350	./.	0/0:18,0:2:5.93:0,6,45	0/0:23,0:7:5.46:0,5,67	0/0:8,0:3:6.02:0,6,75	0/0:2,0:1:3.01:0,3,45	0/0:12,0:8:21.07:0,21,260	0/0:7,0:3:6.02:0,6,75	0/0:5,0:4:12.03:0,12,137	0/0:6,0:2:6.02:0,6,75	0/0:7,0:4:9.03:0,9,111	0/0:6,0:4:9.03:0,9,112	0/0:5,0:3:2.97:0,3,20	0/0:7,0:5:8.99:0,9,112	1/1:4,4:4:6.02:77,6,0	0/0:9,1:8:11.99:0,12,103	0/1:10,0:6:12.24:12,0,22	0/1:8,5:9:4.07:125,0,4	0/0:10,0:3:3.01:0,3,37	0/0:2,0:2:5.75:0,6,49	0/0:32,0:24:35.29:0,35,462	0/0:9,0:4:8.97:0,9,93	./.	0/1:7,0:4:5.06:5,0,100	0/1:6,6:9:21.78:124,0,22	0/0:10,0:6:14.26:0,14,120	0/0:4,0:2:3:0,3,26	0/0:4,0:3:8.86:0,9,92
chr10	5290770	.	ATGTG	A	673.67	PASS	AB=0.731;AC=18;AF=0.409;AN=44;BaseQRankSum=3.629;DP=541;FS=1.062;HRun=0;HaplotypeScore=84.7767;InbreedingCoeff=0.4443;MQ=58.84;MQ0=20;MQRankSum=-3.018;QD=3.76;ReadPosRankSum=3.333;VQSLOD=0.8174;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:32:41.88:0,42,804	0/0:0,0:1:3.01:0,3,52	./.	./.	0/0:11,0:12:6.02:0,6,123	0/0:9,0:11:19.60:0,20,380	0/0:24,0:29:17.53:0,18,300	0/0:24,0:20:4.83:0,5,66	0/0:18,0:21:3.11:0,3,440	0/0:13,0:13:2.74:0,3,12	./.	1/1:9,4:16:21.03:272,21,0	1/1:3,4:8:5.98:67,6,0	1/1:8,6:15:3:46,3,0	0/1:15,1:21:26.28:26,0,102	./.	1/1:15,0:19:2.44:27,2,0	0/1:14,2:26:22.22:78,0,22	0/0:19,0:18:10.84:0,11,171	0/0:8,0:8:3.01:0,3,70	0/0:51,0:50:23.82:0,24,483	0/0:8,0:7:2.99:0,3,24	1/1:10,3:13:3.01:46,3,0	1/1:25,9:34:9.03:139,9,0	./.	./.	1/1:13,0:16:12.01:112,12,0	1/1:10,0:10:2.60:10,3,0
chr10	5292322	.	CACT	C	4861.08	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=12.609;DP=454;FS=21.354;HRun=0;HaplotypeScore=73.7856;InbreedingCoeff=0.9928;MQ=83.63;MQ0=0;MQRankSum=-9.577;QD=37.98;ReadPosRankSum=2.642;VQSLOD=3.8546;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:39,0:39:84.25:1005,84,0	0/0:8,0:8:24.08:0,24,502	0/0:15,0:15:39.13:0,39,829	0/0:16,0:16:42.14:0,42,900	0/0:12,0:12:33.11:0,33,720	0/0:8,0:8:15.05:0,15,319	0/0:27,0:27:72.25:0,72,1554	0/0:30,0:30:81.28:0,81,1789	0/0:9,0:9:27.09:0,27,596	0/0:12,0:12:30.10:0,30,663	0/0:6,0:6:18.06:0,18,380	0/0:17,0:17:45.15:0,45,978	0/0:11,0:11:33.11:0,33,728	0/0:14,0:14:36.11:0,36,736	1/1:1,15:16:39.13:627,39,0	1/1:0,8:8:24.08:386,24,0	1/1:1,34:35:93.32:1495,93,0	1/1:2,15:17:45.15:723,45,0	0/0:13,0:13:36.10:0,36,707	0/0:16,0:16:48.16:0,48,1045	0/0:32,0:32:90.26:0,90,1854	0/0:14,0:14:42.14:0,42,919	0/0:9,0:9:27.09:0,27,596	0/0:20,0:20:54.19:0,54,1171	1/1:0,13:13:39.13:627,39,0	0/0:12,0:12:36.11:0,36,756	0/0:18,0:18:51.17:0,51,1052	0/0:7,0:7:21.05:0,21,403
chr10	5292328	.	TACC	T	3125.42	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=14.560;DP=438;FS=22.929;HRun=0;HaplotypeScore=76.5441;InbreedingCoeff=0.8788;MQ=84.81;MQ0=0;MQRankSum=-9.110;QD=25.20;ReadPosRankSum=3.040;VQSLOD=1.5879;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,35:35:84.29:1549,84,0	0/0:8,0:8:24.07:0,24,533	0/0:13,0:13:39.13:0,39,887	0/0:19,0:19:57.14:0,57,1172	0/0:13,0:13:36.12:0,36,811	0/0:5,0:5:15.05:0,15,331	0/0:24,0:24:72.21:0,72,1673	0/0:29,0:29:84.27:0,84,2021	0/0:9,0:9:27.09:0,27,661	0/0:11,0:11:33.11:0,33,767	0/0:6,0:6:18.05:0,18,394	0/0:18,0:18:54.15:0,54,1149	0/0:11,0:11:33.11:0,33,812	0/0:12,0:12:36.10:0,36,791	0/1:18,0:18:33.22:244,0,33	1/1:8,0:8:23.86:183,24,0	1/1:34,0:34:92.44:697,92,0	1/1:15,0:16:27.77:318,28,0	0/0:12,0:12:33.01:0,33,741	0/0:16,0:16:48.16:0,48,1121	0/0:28,0:28:84.29:0,84,2031	0/0:14,0:14:42.14:0,42,1017	0/0:10,0:10:30.08:0,30,688	0/0:19,0:19:57.18:0,57,1283	1/1:13,0:13:38.83:313,39,0	0/0:12,0:12:36.12:0,36,867	0/0:19,0:19:57.11:0,57,1100	0/0:6,0:6:18.04:0,18,393
chr10	5293296	.	G	GTA	1700.10	PASS	AB=0.698;AC=8;AF=0.143;AN=56;BaseQRankSum=11.014;DP=465;FS=14.241;HRun=0;HaplotypeScore=85.4765;InbreedingCoeff=0.6685;MQ=68.65;MQ0=0;MQRankSum=-9.755;QD=20.00;ReadPosRankSum=0.719;VQSLOD=2.9892;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:9,12:21:7.82:377,0,8	0/0:6,0:6:15.03:0,15,192	0/0:14,0:14:39.12:0,39,599	0/0:10,0:10:4.06:0,4,351	0/0:10,0:10:30.08:0,30,445	0/0:16,0:16:45.15:0,45,725	0/0:18,0:18:54.17:0,54,854	0/0:30,0:29:84.29:0,84,1355	0/0:18,0:18:54.18:0,54,869	0/0:15,0:15:39.11:0,39,570	0/0:10,0:9:21.07:0,21,330	0/0:20,0:20:60.20:0,60,978	0/0:17,0:17:51.15:0,51,805	0/0:30,0:30:90.27:0,90,1408	0/1:13,6:19:20.35:266,0,20	0/0:18,0:18:54.15:0,54,825	1/1:5,11:16:10.59:341,11,0	1/1:7,11:18:35.72:495,36,0	0/0:12,0:11:30.09:0,30,451	0/0:3,0:3:9.03:0,9,135	0/0:41,0:41:99:0,120,1890	0/0:6,0:6:15.05:0,15,242	0/0:9,0:9:24.08:0,24,391	0/0:37,0:37:99:0,111,1725	1/1:3,8:11:30.55:371,31,0	0/0:15,0:15:44.78:0,45,645	0/0:12,0:12:36.12:0,36,586	0/0:13,0:13:36.08:0,36,510
chr10	5293299	.	C	CA	1211.19	PASS	AB=0.690;AC=6;AF=0.107;AN=56;BaseQRankSum=12.240;DP=479;FS=47.658;HRun=0;HaplotypeScore=92.2958;InbreedingCoeff=0.2367;MQ=69.43;MQ0=0;MQRankSum=-11.900;QD=11.87;ReadPosRankSum=1.933;VQSLOD=1.7942;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:18,12:30:99:330,0,137	0/0:4,0:4:12.03:0,12,151	0/0:14,0:14:39.11:0,39,518	0/0:13,0:13:35.99:0,36,407	0/0:10,0:10:24.08:0,24,336	0/0:16,0:16:45.15:0,45,629	0/0:20,0:20:57.19:0,57,795	0/0:29,0:28:81.26:0,81,1118	0/0:18,0:18:54.17:0,54,738	0/0:17,0:17:45.15:0,45,616	0/0:10,0:9:24.08:0,24,335	0/0:21,0:21:60.20:0,60,839	0/0:17,0:17:51.17:0,51,712	0/0:30,0:30:90.28:0,90,1238	0/1:17,6:23:99:256,0,236	0/0:16,0:16:48.16:0,48,671	0/1:9,11:20:77.36:269,0,77	0/1:6,11:17:67.33:261,0,67	0/0:12,0:11:30.10:0,30,420	0/0:3,0:3:9.03:0,9,126	0/0:39,0:39:99:0,108,1471	0/0:6,0:6:15.05:0,15,210	0/0:9,0:9:24.08:0,24,335	0/0:34,0:34:99:0,102,1427	1/1:4,8:12:27.44:225,27,0	0/0:15,0:15:45.15:0,45,629	0/0:13,0:13:39.12:0,39,528	0/0:11,0:11:33.11:0,33,461
chr10	5293306	.	G	GCTTG	4586.43	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=11.040;DP=501;FS=7.416;HRun=0;HaplotypeScore=116.2261;InbreedingCoeff=0.9731;MQ=71.01;MQ0=0;MQRankSum=-13.553;QD=39.88;ReadPosRankSum=-3.091;VQSLOD=3.9340;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:29:55.53:901,56,0	0/0:3,0:3:9.03:0,9,171	0/0:15,0:15:39.12:0,39,698	0/0:18,0:18:35.52:0,36,483	0/0:9,0:9:21.07:0,21,399	0/0:15,0:15:42.13:0,42,765	0/0:22,0:22:25.46:0,25,1111	0/0:27,0:26:69.24:0,69,1306	0/0:19,0:19:57.18:0,57,1045	0/0:19,0:19:54.17:0,54,945	0/0:9,0:8:24.08:0,24,455	0/0:22,0:22:66.21:0,66,1215	0/0:16,0:16:45.14:0,45,821	0/0:29,0:29:81.28:0,81,1529	1/1:23,0:23:43.03:801,43,0	0/0:16,0:16:45.15:0,45,854	1/1:25,0:25:59.79:1005,60,0	1/1:17,5:25:51.08:1102,51,0	0/0:12,0:11:33.10:0,33,586	0/0:5,0:5:12.01:0,12,192	0/0:39,0:39:99:0,114,2076	0/0:5,0:5:15.05:0,15,285	0/0:7,0:7:21.07:0,21,399	0/0:38,0:38:99:0,114,2002	1/1:13,0:13:37.32:778,37,0	0/0:16,0:16:45.15:0,45,848	0/0:13,0:13:36.12:0,36,674	0/0:12,0:12:36.12:0,36,674
chr10	5293416	.	T	TCG	7700.60	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=0.288;DP=654;FS=0.351;HRun=0;HaplotypeScore=80.7662;InbreedingCoeff=0.9999;MQ=77.51;MQ0=0;MQRankSum=-3.725;QD=49.68;ReadPosRankSum=2.847;VQSLOD=6.0743;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,39:43:99:1963,102,0	0/0:11,0:11:33.08:0,33,480	0/0:15,0:14:39.12:0,39,578	0/0:24,0:24:63.14:0,63,856	0/0:16,0:16:45.14:0,45,665	0/0:16,0:16:48.16:0,48,735	0/0:21,0:21:63.21:0,63,965	0/0:38,0:38:99:0,108,1600	0/0:21,0:21:63.21:0,63,965	0/0:27,0:27:78.25:0,78,1158	0/0:17,0:17:51.17:0,51,781	0/0:17,0:17:51.16:0,51,762	0/0:16,0:16:45.14:0,45,668	0/0:23,0:23:69.23:0,69,1056	1/1:0,23:23:63.22:1212,63,0	0/0:22,0:22:66.22:0,66,1007	1/1:0,34:36:87.30:1675,87,0	1/1:1,26:27:78.27:1484,78,0	0/0:15,0:15:45.15:0,45,689	0/0:15,0:15:42.12:0,42,601	0/0:35,0:35:99:0,102,1513	0/0:24,0:24:69.22:0,69,1035	0/0:22,0:22:63.19:0,63,939	0/0:35,0:35:99:0,105,1605	1/1:2,24:26:72.25:1366,72,0	0/0:32,0:32:93.32:0,93,1424	0/0:19,0:18:57.15:0,57,847	0/0:18,0:18:54.13:0,54,757
chr10	5294892	.	G	GTCT	1858.51	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-6.227;DP=624;FS=1.527;HRun=0;HaplotypeScore=83.2175;InbreedingCoeff=0.9628;MQ=89.88;MQ0=0;MQRankSum=-5.566;QD=53.10;ReadPosRankSum=1.303;VQSLOD=5.9740;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,34:34:87.30:1953,87,0	0/0:4,0:4:12.04:0,12,200	0/0:29,0:29:80.97:0,81,1281	0/0:23,0:23:48.16:0,48,759	0/0:23,0:23:63.20:0,63,1022	0/0:24,0:25:69.20:0,69,1073	0/0:18,0:18:54.15:0,54,847	0/0:27,0:27:78.26:0,78,1268	0/0:18,0:18:51.17:0,51,850	0/0:25,0:25:66.23:0,66,1097	0/0:16,0:16:48.16:0,48,800	0/0:27,0:27:78.25:0,78,1245	0/0:22,0:22:57.19:0,57,946	0/0:26,0:26:75.22:0,75,1186	0/0:18,0:18:54.17:0,54,875	0/0:16,0:16:48.16:0,48,800	0/0:19,0:19:48.16:0,48,799	0/0:31,0:31:84.17:0,84,1285	0/0:30,0:30:87.30:0,87,1437	0/0:24,0:24:72.25:0,72,1200	0/0:27,0:27:81.28:0,81,1334	0/0:23,0:23:66.21:0,66,1074	0/0:15,0:15:45.15:0,45,750	0/0:22,0:22:60.20:0,60,994	0/0:24,0:24:66.20:0,66,1073	0/0:20,0:20:54.18:0,54,900	0/0:30,0:30:90.31:0,90,1462	0/0:7,0:7:18.06:0,18,300
chr10	5295232	.	T	TG	1837.63	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-10.754;DP=695;FS=3.284;HRun=5;HaplotypeScore=70.0536;InbreedingCoeff=0.9905;MQ=80.05;MQ0=0;MQRankSum=-0.543;QD=32.24;ReadPosRankSum=-4.822;VQSLOD=2.0297;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,126,1337	0/0:11,0:11:33.08:0,33,354	0/0:19,0:19:48.10:0,48,497	0/0:19,0:19:14.44:0,14,373	0/0:29,0:29:84.12:0,84,867	0/0:36,0:36:99:0,108,1122	0/0:30,0:30:81.16:0,81,846	1/1:5,37:42:99:1446,111,0	0/0:22,0:22:63.12:0,63,659	0/0:29,0:29:87.20:0,87,926	0/0:16,0:16:48.12:0,48,516	0/0:22,0:22:57.13:0,57,606	0/0:26,0:26:69.17:0,69,741	0/0:24,0:24:66.15:0,66,701	0/0:26,0:26:78.20:0,78,838	1/1:2,13:15:39.13:513,39,0	0/0:22,0:22:66.15:0,66,700	0/0:18,0:18:45.11:0,45,484	0/0:16,0:16:45.11:0,45,484	0/0:30,0:30:84.15:0,84,882	0/0:26,0:26:78.16:0,78,815	0/0:31,0:31:87.20:0,87,925	0/0:25,0:25:75.17:0,75,796	0/0:23,0:23:69.17:0,69,741	0/0:14,0:14:39.06:0,39,407	0/0:31,0:31:84.20:0,84,896	0/0:38,0:38:99:0,105,1119	0/0:13,0:13:39.10:0,39,416
chr10	5295352	.	T	TC	1465.48	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-6.083;DP=689;FS=18.954;HRun=3;HaplotypeScore=65.6629;InbreedingCoeff=0.9915;MQ=83.77;MQ0=1;MQRankSum=-5.349;QD=31.86;ReadPosRankSum=1.552;VQSLOD=1.8962;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,41:46:81.39:1560,81,0	0/0:11,0:11:33.08:0,33,381	0/0:26,0:25:62.10:0,62,728	0/0:17,0:17:32.64:0,33,447	0/0:24,0:24:69.21:0,69,828	0/0:24,0:24:66.20:0,66,792	0/0:34,0:34:99:0,102,1214	0/0:40,0:40:99:0,111,1307	0/0:18,0:18:54.15:0,54,637	0/0:36,0:36:96.26:0,96,1109	0/0:18,0:18:48.15:0,48,576	0/0:23,0:23:63.18:0,63,744	0/0:24,0:24:63.19:0,63,756	0/0:20,0:20:60.17:0,60,706	0/0:19,0:19:57.16:0,57,673	0/0:27,0:27:81.22:0,81,941	0/0:23,0:23:69.21:0,69,827	0/0:22,0:22:63.18:0,63,743	0/0:17,0:17:51.15:0,51,605	0/0:28,0:28:78.24:0,78,936	0/0:36,0:36:90.26:0,90,1069	0/0:28,0:28:81.24:0,81,960	0/0:18,0:18:54.14:0,54,627	0/0:38,0:37:99:0,105,1221	0/0:19,0:19:57.17:0,57,684	0/0:23,0:23:69.20:0,69,818	0/0:24,0:24:66.20:0,66,792	0/0:6,0:6:18.03:0,18,192
chr10	5296131	.	TTCC	T	803.61	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.106;DP=534;FS=8.636;HRun=0;HaplotypeScore=80.7802;InbreedingCoeff=0.9897;MQ=85.12;MQ0=0;MQRankSum=-2.058;QD=30.91;ReadPosRankSum=2.531;VQSLOD=3.6732;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,23:26:54.18:898,54,0	0/0:9,0:9:27.09:0,27,544	0/0:21,0:21:56.14:0,56,1190	0/0:20,0:20:48.16:0,48,1049	0/0:25,0:25:63.22:0,63,1365	0/0:21,0:21:57.20:0,57,1284	0/0:21,0:21:57.20:0,57,1252	0/0:29,0:29:78.26:0,78,1728	0/0:15,0:15:39.09:0,39,830	0/0:15,0:15:39.13:0,39,869	0/0:6,0:6:18.06:0,18,406	0/0:18,0:18:54.19:0,54,1220	0/0:12,0:12:36.12:0,36,797	0/0:14,0:14:42.14:0,42,922	0/0:26,0:26:75.26:0,75,1662	0/0:12,0:12:33.08:0,33,649	0/0:28,0:28:75.24:0,75,1652	0/0:24,0:24:69.24:0,69,1561	0/0:22,0:22:60.20:0,60,1303	0/0:13,0:13:36.12:0,36,805	0/0:29,0:29:81.26:0,81,1789	0/0:23,0:23:60.21:0,60,1322	0/0:11,0:11:30.10:0,30,622	0/0:23,0:23:60.21:0,60,1353	0/0:14,0:14:36.12:0,36,755	0/0:21,0:21:60.21:0,60,1359	0/0:24,0:24:72.25:0,72,1630	0/0:12,0:12:36.12:0,36,815
chr10	5296170	.	GAA	G	844.53	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=3.178;DP=539;FS=7.816;HRun=15;HaplotypeScore=78.7094;InbreedingCoeff=0.9625;MQ=76.94;MQ0=0;MQRankSum=-0.139;QD=11.41;ReadPosRankSum=5.199;VQSLOD=2.4400;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,1:35:44.02:0,44,654	0/0:6,0:6:14.96:0,15,163	0/0:27,0:20:24.76:0,25,172	0/0:15,0:13:14.77:0,15,117	0/0:20,0:24:47.12:0,47,574	0/0:14,1:16:12.12:0,12,409	0/0:24,0:25:59.60:0,60,727	0/0:14,0:32:58.02:0,58,563	0/0:8,0:8:21:0,21,247	0/0:19,0:21:46.58:0,47,512	0/0:13,0:16:26.99:0,27,427	0/0:11,1:15:17.15:0,17,430	0/0:15,0:17:44.09:0,44,520	0/0:20,0:20:48.11:0,48,588	1/1:5,15:21:44.59:374,45,0	0/0:3,0:15:26.51:0,27,228	1/1:7,15:23:25.85:236,26,0	1/1:5,9:18:17.09:218,17,0	0/0:18,0:21:34.06:0,34,348	0/0:15,0:19:50.43:0,50,546	0/0:15,1:17:12.16:0,12,401	0/0:15,0:16:26.51:0,27,290	0/0:16,1:18:18.12:0,18,458	0/0:14,0:18:33.03:0,33,482	1/1:3,7:12:23.38:175,23,0	0/0:22,1:26:26.03:0,26,270	0/0:21,1:23:34.99:0,35,641	0/0:11,0:12:26.55:0,27,314
chr10	5296795	.	A	AAAC	628	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=-1.163;DP=299;FS=1.184;HRun=0;HaplotypeScore=50.6957;InbreedingCoeff=0.4429;MQ=42.12;MQ0=4;MQRankSum=-1.565;QD=20.93;ReadPosRankSum=-0.182;VQSLOD=2.7847;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,16:19:36.12:712,36,0	0/0:6,0:6:12.03:0,12,154	0/0:13,0:4:6.02:0,6,85	0/0:7,0:4:3.41:0,3,18	0/0:7,0:7:15.02:0,15,190	0/0:11,0:11:27:0,27,337	0/0:15,0:15:36.07:0,36,469	0/0:16,0:15:30.04:0,30,364	0/0:10,0:10:24.07:0,24,324	0/0:15,0:15:39.12:0,39,534	0/0:10,0:10:20.99:0,21,253	0/0:9,0:9:24.08:0,24,339	0/0:12,0:12:33.11:0,33,466	0/0:12,0:12:21.03:0,21,274	0/0:12,0:12:23.99:0,24,294	0/0:10,0:10:27.09:0,27,381	0/0:9,0:9:21.07:0,21,297	0/1:10,0:10:21.28:21,0,194	0/0:8,0:8:9.03:0,9,123	0/0:8,0:8:21.07:0,21,293	0/0:6,0:6:14.78:0,15,182	0/0:11,0:11:23.97:0,24,274	0/0:7,0:7:15.05:0,15,212	0/0:3,0:3:2.97:0,3,20	0/0:15,0:15:33.04:0,33,423	0/0:11,0:11:21.06:0,21,267	0/0:14,0:13:33.07:0,33,444	0/0:11,0:12:34.88:0,35,416
chr10	5296914	.	G	GC	5342.51	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-11.769;DP=605;FS=3.170;HRun=3;HaplotypeScore=64.0906;InbreedingCoeff=0.9646;MQ=80.33;MQ0=0;MQRankSum=-0.260;QD=36.59;ReadPosRankSum=1.519;VQSLOD=5.5811;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,111,1331	0/0:14,1:15:3.22:0,3,462	0/0:23,0:23:69.16:0,69,789	0/0:16,0:15:29.16:0,29,332	0/0:13,0:13:30.06:0,30,342	0/0:23,0:22:66.12:0,66,759	0/0:30,0:30:90.28:0,90,1079	1/1:3,16:19:51.16:694,51,0	0/0:23,0:23:69.18:0,69,804	0/0:26,0:26:75.17:0,75,857	0/0:9,0:9:21.06:0,21,252	0/0:20,0:20:60.17:0,60,708	0/0:25,0:25:75.23:0,75,899	0/0:16,0:16:48.11:0,48,560	1/1:0,16:16:48.09:647,48,0	1/1:0,23:23:63.16:858,63,0	1/1:2,38:40:99:1428,102,0	1/1:2,23:25:63.18:860,63,0	0/0:27,0:27:81.25:0,81,972	0/0:22,0:22:63.15:0,63,739	0/0:30,0:30:81.23:0,81,959	0/0:15,0:15:39.12:0,39,467	0/0:16,0:16:48.15:0,48,575	0/0:19,0:19:54.12:0,54,630	1/1:0,22:23:63.17:855,63,0	0/0:28,0:28:78.19:0,78,909	0/0:15,0:15:39.12:0,39,465	0/0:7,0:7:21.06:0,21,252
chr10	5297333	.	A	ATT	1455.21	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=8.071;DP=576;FS=9.323;HRun=1;HaplotypeScore=81.9052;InbreedingCoeff=0.9780;MQ=94.34;MQ0=0;MQRankSum=-4.236;QD=42.80;ReadPosRankSum=0.799;VQSLOD=2.9248;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,30:34:87.17:1550,87,0	0/0:9,0:9:27.09:0,27,411	0/0:26,0:26:69.12:0,69,941	0/0:32,0:32:78.74:0,79,1119	0/0:19,0:19:54.17:0,54,801	0/0:14,0:14:42.11:0,42,599	0/0:24,0:24:72.20:0,72,1037	0/0:35,0:34:99:0,102,1415	0/0:29,0:29:87.30:0,87,1328	0/0:16,0:16:48.16:0,48,735	0/0:6,0:6:15.04:0,15,209	0/0:25,0:25:72.20:0,72,1038	0/0:22,0:22:63.21:0,63,961	0/0:11,0:11:33.08:0,33,463	0/0:20,0:20:54.15:0,54,784	0/0:10,0:10:30.10:0,30,451	0/0:33,0:33:96.29:0,96,1419	0/0:18,0:18:54.18:0,54,823	0/0:15,0:15:42.12:0,42,604	0/0:10,0:10:30.05:0,30,432	0/0:46,0:46:99:0,126,1861	0/0:16,0:16:36.12:0,36,549	0/0:12,0:12:36.12:0,36,549	0/0:34,0:34:99:0,99,1491	0/0:17,0:17:51.16:0,51,760	0/0:20,0:20:60.19:0,60,881	0/0:15,0:15:45.10:0,45,622	0/0:7,0:7:21.06:0,21,300
chr10	5297412	.	C	CA	3211.27	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-11.433;DP=680;FS=0.459;HRun=0;HaplotypeScore=76.8534;InbreedingCoeff=0.9934;MQ=82.78;MQ0=0;MQRankSum=-0.702;QD=42.25;ReadPosRankSum=2.190;VQSLOD=4.3136;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:87.26:0,87,1015	0/0:6,0:6:15.04:0,15,193	0/0:20,0:20:59.94:0,60,742	0/0:21,0:21:54:0,54,645	0/0:19,0:19:54.08:0,54,691	0/0:19,0:19:54.14:0,54,726	0/0:30,0:30:84.21:0,84,1129	0/0:21,0:21:57.13:0,57,744	0/0:39,0:39:99:0,114,1588	0/0:26,0:26:77.39:0,77,1012	0/0:11,0:11:33.11:0,33,453	0/0:36,0:36:99:0,105,1426	0/0:26,0:26:75.25:0,75,1046	0/0:27,0:27:72.22:0,72,986	1/1:0,29:29:75.26:1198,75,0	0/0:19,0:19:54.14:0,54,730	0/0:41,0:41:99:0,120,1606	1/1:0,23:23:66.23:1055,66,0	0/0:24,0:24:66.17:0,66,877	0/0:21,0:21:54.17:0,54,735	0/0:43,0:43:99:0,123,1682	0/0:16,0:16:45.02:0,45,562	0/0:11,0:11:24.08:0,24,333	0/0:32,0:32:90.28:0,90,1238	1/1:0,24:24:69.24:1102,69,0	0/0:22,0:22:63.05:0,63,792	0/0:22,0:22:63.20:0,63,862	0/0:11,0:11:30.10:0,30,418
chr10	5297586	.	T	TG	1991.48	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.048;DP=664;FS=11.631;HRun=1;HaplotypeScore=71.6506;InbreedingCoeff=0.9987;MQ=85.05;MQ0=0;MQRankSum=-5.410;QD=36.21;ReadPosRankSum=0.376;VQSLOD=2.8420;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,53:55:99:2086,141,0	0/0:9,0:9:27.09:0,27,350	0/0:24,0:24:72.21:0,72,908	0/0:17,0:17:45.10:0,45,561	0/0:16,0:16:45.13:0,45,569	0/0:20,0:20:57.17:0,57,725	0/0:24,0:24:72.22:0,72,919	0/0:27,0:27:78.24:0,78,988	0/0:23,0:23:66.20:0,66,839	0/0:31,0:31:90.26:0,90,1151	0/0:17,0:17:45.15:0,45,584	0/0:20,0:20:60.20:0,60,779	0/0:20,0:20:60.20:0,60,779	0/0:20,0:20:60.20:0,60,779	0/0:28,0:28:84.23:0,84,1047	0/0:23,0:23:69.21:0,69,881	0/0:35,0:34:99:0,102,1323	0/0:37,0:37:99:0,111,1424	0/0:19,0:19:45.15:0,45,584	0/0:12,0:12:36.12:0,36,468	0/0:43,0:43:99:0,126,1607	0/0:19,0:19:57.17:0,57,726	0/0:20,0:20:54.18:0,54,701	0/0:31,0:31:93.29:0,93,1193	0/0:25,0:25:69.20:0,69,880	0/0:16,0:16:48.16:0,48,623	0/0:19,0:19:51.15:0,51,646	0/0:14,0:14:42.14:0,42,545
chr10	5297715	.	TG	T	427.42	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=8.214;DP=652;FS=2.668;HRun=1;HaplotypeScore=95.0739;InbreedingCoeff=0.9957;MQ=82.73;MQ0=0;MQRankSum=-7.376;QD=14.25;ReadPosRankSum=0.802;VQSLOD=3.2443;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,24:30:72.70:522,73,0	0/0:7,0:7:21.07:0,21,333	0/0:20,0:20:53.94:0,54,636	0/0:19,0:19:48.94:0,49,596	0/0:29,0:29:87.30:0,87,1385	0/0:15,0:15:45.15:0,45,716	0/0:38,0:38:99:0,114,1791	0/0:26,0:26:75.21:0,75,1045	0/0:17,0:17:51.17:0,51,815	0/0:26,0:26:78.27:0,78,1246	0/0:13,0:13:39.13:0,39,623	0/0:23,0:23:69.22:0,69,1080	0/0:22,0:22:66.22:0,66,1049	0/0:22,0:22:66.23:0,66,1055	0/0:24,0:23:72.25:0,72,1144	0/0:29,0:29:87.29:0,87,1300	0/0:36,0:36:99:0,108,1712	0/0:34,0:34:99:0,102,1599	0/0:14,0:14:42.14:0,42,663	0/0:17,0:17:51.17:0,51,809	0/0:48,0:48:99:0,132,2037	0/0:19,0:19:51.17:0,51,815	0/0:22,0:22:66.22:0,66,1052	0/0:28,0:28:84.24:0,84,1314	0/0:17,0:17:51.16:0,51,792	0/0:25,0:25:75.25:0,75,1169	0/0:20,0:19:60.18:0,60,931	0/0:12,0:12:36.12:0,36,576
chr10	5297717	.	CGGAGGCAGGA	C	1576.27	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.488;DP=647;FS=0.000;HRun=0;HaplotypeScore=211.5334;InbreedingCoeff=0.9918;MQ=81.77;MQ0=0;MQRankSum=-7.587;QD=63.05;ReadPosRankSum=2.743;VQSLOD=3.4504;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,24:25:60.21:1671,60,0	0/0:6,0:6:18.06:0,18,913	0/0:19,0:19:53.96:0,54,1746	0/0:18,0:18:54.03:0,54,1502	0/0:30,0:30:90.27:0,90,4286	0/0:15,0:15:42.14:0,42,1913	0/0:37,0:37:99:0,111,5535	0/0:25,0:25:72.23:0,72,3394	0/0:17,0:17:51.18:0,51,2757	0/0:27,0:27:81.28:0,81,4125	0/0:13,0:13:39.13:0,39,1848	0/0:22,0:22:66.23:0,66,3468	0/0:23,0:23:66.23:0,66,3314	0/0:23,0:23:69.24:0,69,3635	0/0:23,0:22:69.22:0,69,3650	0/0:29,0:29:87.30:0,87,4330	0/0:38,0:38:99:0,114,5896	0/0:33,0:33:96.33:0,96,5186	0/0:13,0:13:39.12:0,39,1774	0/0:17,0:17:48.16:0,48,2452	0/0:49,0:50:99:0,141,7226	0/0:19,0:19:54.19:0,54,2441	0/0:22,0:22:63.22:0,63,3028	0/0:28,0:28:84.29:0,84,4561	0/0:20,0:20:60.21:0,60,2950	0/0:23,0:23:69.24:0,69,3544	0/0:20,0:19:60.21:0,60,3026	0/0:12,0:12:36.12:0,36,1926
chr10	5298789	.	CCACGGCCACA	C	1321.41	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.303;DP=698;FS=3.298;HRun=0;HaplotypeScore=213.1791;InbreedingCoeff=0.9982;MQ=69.30;MQ0=0;MQRankSum=-6.328;QD=38.86;ReadPosRankSum=-0.270;VQSLOD=2.9288;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,22:34:49.03:1416,49,0	0/0:12,0:12:36.12:0,36,1754	0/0:32,0:30:69.68:0,70,2315	0/0:24,0:19:48.13:0,48,1710	0/0:14,0:14:42.14:0,42,2022	0/0:18,0:18:54.18:0,54,2534	0/0:33,0:33:93.32:0,93,4685	0/0:21,0:21:48.16:0,48,2208	0/0:27,0:27:81.23:0,81,3806	0/0:25,0:25:69.24:0,69,3173	0/0:21,0:21:60.19:0,60,2766	0/0:27,0:27:60.50:0,61,3325	0/0:24,0:24:66.23:0,66,2942	0/0:25,0:25:69.24:0,69,3466	0/0:25,0:25:72.25:0,72,3238	0/0:20,0:20:60.21:0,60,2882	0/0:31,0:31:90.31:0,90,4246	0/0:48,0:48:99:0,141,6632	0/0:17,0:17:51.17:0,51,2093	0/0:19,0:19:45.14:0,45,2035	0/0:64,0:64:99:0,181,8529	0/0:13,0:13:37.37:0,37,1586	0/0:17,0:17:51.18:0,51,2176	0/0:44,0:44:99:0,120,5223	0/0:19,0:19:51.17:0,51,2200	0/0:24,0:24:66.23:0,66,2908	0/0:11,0:11:30.10:0,30,1550	0/0:9,0:9:27.09:0,27,1356
chr10	5298791	.	ACGGC	A	406.40	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.195;DP=701;FS=4.883;HRun=0;HaplotypeScore=130.2457;InbreedingCoeff=0.9985;MQ=68.19;MQ0=0;MQRankSum=-5.935;QD=12.70;ReadPosRankSum=0.189;VQSLOD=2.9484;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:25,7:32:45.57:501,46,0	0/0:12,0:12:36.12:0,36,953	0/0:32,0:30:68.24:0,68,1525	0/0:24,0:20:47.33:0,47,999	0/0:16,0:16:48.16:0,48,1278	0/0:19,0:19:57.19:0,57,1467	0/0:37,0:37:99:0,108,2914	0/0:20,0:20:54.19:0,54,1459	0/0:27,0:27:81.23:0,81,2126	0/0:23,0:23:69.23:0,69,1785	0/0:21,0:21:60.19:0,60,1539	0/0:27,0:27:62.57:0,63,1897	0/0:24,0:24:66.23:0,66,1718	0/0:25,0:25:69.24:0,69,1896	0/0:25,0:25:72.25:0,72,1874	0/0:20,0:20:60.21:0,60,1603	0/0:30,0:30:90.31:0,90,2434	0/0:50,0:50:99:0,151,3953	0/0:17,0:17:51.17:0,51,1263	0/0:18,0:18:48.15:0,48,1227	0/0:64,0:64:99:0,181,4755	0/0:13,0:13:37.68:0,38,954	0/0:18,0:18:54.18:0,54,1375	0/0:45,0:45:99:0,123,3196	0/0:18,0:18:51.17:0,51,1268	0/0:23,0:23:66.23:0,66,1724	0/0:11,0:11:33.11:0,33,889	0/0:9,0:9:27.09:0,27,704
chr10	5298795	.	CCA	C	75.58	PASS	AB=0.924;AC=6;AF=0.107;AN=56;BaseQRankSum=6.827;DP=721;FS=3.714;HRun=0;HaplotypeScore=103.3551;InbreedingCoeff=0.2486;MQ=67.78;MQ0=0;MQRankSum=-4.987;QD=0.80;ReadPosRankSum=0.500;VQSLOD=2.0193;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:33,0:33:6.44:145,6,0	0/1:11,1:12:4.09:4,0,453	0/0:36,1:33:4.88:0,5,510	0/0:28,0:24:50.76:0,51,777	0/0:18,0:18:48.16:0,48,780	0/0:20,0:20:48.16:0,48,787	0/0:40,0:40:99:0,108,1760	0/0:19,0:19:39.13:0,39,639	0/0:26,0:26:69.24:0,69,1129	0/0:21,1:22:16.97:0,17,799	0/0:20,0:20:27.39:0,27,758	0/0:26,1:27:38.53:0,39,1145	0/0:22,1:23:19.99:0,20,832	0/0:23,0:23:63.22:0,63,1033	0/0:23,0:23:51.17:0,51,837	0/0:19,2:21:13.97:0,14,750	0/0:33,0:33:78.27:0,78,1279	0/0:51,0:51:99:0,126,2030	0/1:15,1:16:1.08:1,0,504	0/0:15,0:15:36.12:0,36,591	0/0:66,1:67:99:0,131,2633	0/0:13,0:13:27.09:0,27,440	0/0:18,0:18:30.10:0,30,491	0/0:42,3:45:47.10:0,47,1289	0/1:20,2:22:23.23:23,0,674	0/0:24,0:24:24.11:0,24,806	0/0:13,0:13:36.12:0,36,584	0/1:10,1:11:4.09:4,0,459
chr10	5298818	.	CCATCACAA	C	1077.35	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.954;DP=747;FS=2.121;HRun=0;HaplotypeScore=194.3490;InbreedingCoeff=0.9990;MQ=74.78;MQ0=0;MQRankSum=-6.154;QD=30.78;ReadPosRankSum=0.002;VQSLOD=3.2961;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:10,25:35:46.04:1172,46,0	0/0:17,0:17:48.16:0,48,2029	0/0:25,0:23:45.26:0,45,1694	0/0:38,0:36:81.51:0,82,2896	0/0:25,0:25:69.21:0,69,2686	0/0:20,0:20:60.21:0,60,2597	0/0:38,0:38:99:0,102,4048	0/0:21,0:21:57.20:0,57,2306	0/0:23,0:23:69.19:0,69,2739	0/0:24,0:24:57.20:0,57,2454	0/0:21,0:21:51.18:0,51,2058	0/0:39,0:39:99:0,108,4669	0/0:23,0:23:66.23:0,66,2830	0/0:27,0:27:69.24:0,69,2823	0/0:23,0:23:57.20:0,57,2450	0/0:22,0:22:63.22:0,63,2681	0/0:34,0:34:96.30:0,96,3890	0/0:52,0:52:99:0,141,5754	0/0:15,0:15:39.13:0,39,1524	0/0:19,0:19:54.19:0,54,2271	0/0:66,0:66:99:0,166,6935	0/0:14,0:14:36.12:0,36,1559	0/0:13,0:13:30.06:0,30,1152	0/0:37,0:37:99:0,105,4528	0/0:24,0:24:60.21:0,60,2575	0/0:25,0:25:72.24:0,72,2884	0/0:16,0:16:48.16:0,48,1911	0/0:11,0:11:33.11:0,33,1348
chr10	5298917	.	CG	C	1116.55	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.215;DP=750;FS=1.477;HRun=2;HaplotypeScore=82.4563;InbreedingCoeff=0.9992;MQ=91.45;MQ0=0;MQRankSum=1.759;QD=34.89;ReadPosRankSum=-1.761;VQSLOD=3.3409;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:96.33:0,96,1511	0/0:11,0:11:30.10:0,30,470	0/0:32,0:32:93.30:0,93,1433	0/0:30,0:30:86.56:0,87,1255	0/0:34,0:34:99:0,99,1526	0/0:26,0:26:75.26:0,75,1186	0/0:30,0:30:90.29:0,90,1413	1/1:0,21:21:63.21:860,63,0	0/0:23,0:23:69.19:0,69,1034	0/0:30,0:30:84.29:0,84,1334	0/0:18,0:18:48.15:0,48,727	0/0:26,0:26:78.27:0,78,1246	0/0:26,0:26:75.22:0,75,1151	0/0:27,0:27:81.27:0,81,1265	0/0:38,0:38:99:0,114,1784	1/1:0,11:11:27.09:378,27,0	0/0:33,0:33:99:0,99,1579	0/0:40,0:40:99:0,117,1824	0/0:29,0:29:87.27:0,87,1360	0/0:20,0:20:57.19:0,57,910	0/0:45,0:45:99:0,132,2100	0/0:23,0:23:66.20:0,66,1014	0/0:26,0:26:78.26:0,78,1221	0/0:21,0:21:63.20:0,63,984	0/0:20,0:20:57.18:0,57,875	0/0:31,0:31:93.30:0,93,1439	0/0:21,0:21:63.18:0,63,951	0/0:20,0:20:60.13:0,60,847
chr10	5299086	.	AG	A	1229.23	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=9.289;DP=792;FS=20.696;HRun=2;HaplotypeScore=88.3951;InbreedingCoeff=0.9959;MQ=87.09;MQ0=1;MQRankSum=-3.641;QD=31.52;ReadPosRankSum=2.307;VQSLOD=2.0114;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,38:38:99:1324,102,0	0/0:15,0:15:42.14:0,42,627	0/0:30,0:30:73.03:0,73,1155	0/0:24,0:24:68.56:0,69,960	0/0:26,0:26:75.24:0,75,1104	0/0:17,0:17:51.15:0,51,720	0/0:26,0:26:78.23:0,78,1107	0/0:37,0:37:99:0,111,1609	0/0:28,0:28:84.26:0,84,1221	0/0:36,0:36:99:0,105,1539	0/0:19,0:19:51.17:0,51,763	0/0:36,0:36:99:0,108,1596	0/0:30,0:30:87.29:0,87,1304	0/0:40,0:40:99:0,117,1752	0/0:35,0:35:99:0,105,1552	0/0:22,0:22:66.22:0,66,988	0/0:26,0:26:78.25:0,78,1148	0/0:29,0:29:84.28:0,84,1242	0/0:23,0:23:68.02:0,68,971	0/0:32,0:32:93.30:0,93,1372	0/0:56,0:56:99:0,169,2471	0/0:24,0:24:72.22:0,72,1038	0/0:14,0:14:39.13:0,39,579	0/0:37,0:37:99:0,108,1597	0/0:28,0:28:81.27:0,81,1194	0/0:29,0:29:87.29:0,87,1301	0/0:27,0:27:81.26:0,81,1190	0/0:7,0:7:21.07:0,21,315
chr10	5300483	.	AGT	A	4831.58	PASS	AB=0.914;AC=19;AF=0.339;AN=56;BaseQRankSum=14.444;DP=972;FS=0.994;HRun=0;HaplotypeScore=132.8766;InbreedingCoeff=0.4693;MQ=63.25;MQ0=4;MQRankSum=1.147;QD=11.32;ReadPosRankSum=0.394;VQSLOD=4.4817;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,0:35:0.78:97,1,0	0/0:20,0:20:39.09:0,39,549	0/0:29,0:18:12.74:0,13,117	0/0:21,0:12:9:0,9,97	0/0:27,1:28:18.99:0,19,686	0/0:34,3:37:22.98:0,23,1259	0/1:36,1:37:40.76:41,0,945	1/1:22,21:43:49.31:689,49,0	0/0:34,1:37:37.06:0,37,1006	0/0:33,0:33:5.09:0,5,1009	0/0:20,1:21:10:0,10,596	0/1:31,5:36:16.64:17,0,1111	0/0:41,1:42:57.82:0,58,1249	0/1:33,3:37:24.24:24,0,996	1/1:14,31:46:68.81:766,69,0	1/1:9,40:49:99:1209,105,0	1/1:11,24:39:64.63:842,65,0	1/1:14,9:24:5.75:372,6,0	0/1:26,3:29:48.85:49,0,528	0/0:26,4:30:4.90:0,5,949	0/0:84,1:86:94.86:0,95,2301	0/0:32,0:33:52.05:0,52,944	0/0:23,2:25:25.01:0,25,806	0/0:39,1:42:4.95:0,5,1273	1/1:6,21:29:62.85:696,63,0	0/0:41,1:42:29.01:0,29,1276	0/1:20,2:23:30.20:30,0,648	0/0:15,2:17:9.97:0,10,598
chr10	5301010	.	T	TC	984.60	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.806;DP=518;FS=0.000;HRun=2;HaplotypeScore=65.4478;InbreedingCoeff=0.9270;MQ=85.77;MQ0=0;MQRankSum=-3.081;QD=37.87;ReadPosRankSum=1.034;VQSLOD=4.1792;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,26:26:75.25:1079,75,0	0/0:6,0:6:15.05:0,15,185	0/0:30,0:29:65.22:0,65,703	0/0:39,0:30:14.61:0,15,523	0/0:9,0:9:27.08:0,27,334	0/0:24,0:24:69.22:0,69,854	0/0:29,0:29:84.25:0,84,1027	0/0:15,0:15:39.12:0,39,474	0/0:13,0:13:39.12:0,39,483	0/0:19,0:19:54.16:0,54,659	0/0:13,0:13:39.08:0,39,456	0/0:17,0:17:45.14:0,45,550	0/0:21,0:21:57.17:0,57,693	0/0:12,0:12:36.07:0,36,419	0/0:8,0:8:24.08:0,24,298	0/0:8,0:8:24.08:0,24,297	0/0:37,0:37:99:0,111,1373	0/0:14,0:14:39.59:0,40,484	0/0:18,0:18:45.14:0,45,553	0/0:18,0:18:51.16:0,51,632	0/0:36,1:37:55.88:0,56,1112	0/0:12,0:12:27.07:0,27,322	0/0:15,0:15:33.05:0,33,379	0/0:23,0:23:66.21:0,66,818	0/0:4,0:4:12.04:0,12,149	0/0:20,0:20:57.15:0,57,688	0/0:22,0:22:63.20:0,63,781	0/0:7,0:7:18.06:0,18,223
chr10	5301647	.	ATATATGTGTGTGTGTGTG	A	730.92	PASS	AB=1.000;AC=4;AF=0.071;AN=56;BaseQRankSum=4.874;DP=387;FS=5.548;HRun=0;HaplotypeScore=157.5188;InbreedingCoeff=0.3078;MQ=60.45;MQ0=7;MQRankSum=-4.396;QD=17.83;ReadPosRankSum=0.569;VQSLOD=2.4686;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:24:3.01:0,3,179	0/0:7,0:7:15.52:0,16,947	0/0:9,0:6:3.01:0,3,44	0/0:9,0:7:0:0,0,1	0/0:14,0:14:30.10:0,30,1339	0/0:12,0:12:36.12:0,36,1526	0/0:19,0:19:49.08:0,49,2029	0/0:38,0:38:99:0,107,2035	0/0:10,0:10:30.10:0,30,1906	0/0:22,0:20:60.20:0,60,3260	0/0:12,0:11:21.07:0,21,1010	0/0:6,0:6:15.05:0,15,1218	0/0:10,0:10:27.09:0,27,1728	0/0:8,0:8:18.06:0,18,1133	0/0:11,0:11:10.09:0,10,192	1/1:0,5:6:12.04:596,12,0	0/1:22,0:21:99:224,0,428	0/0:25,0:25:3.81:0,4,496	0/0:14,0:14:41.79:0,42,1693	0/0:18,0:18:48.16:0,48,2743	0/0:11,0:10:24.08:0,24,1412	0/0:9,0:9:6.02:0,6,334	0/0:6,0:5:9.03:0,9,550	0/0:12,0:12:36.12:0,36,2011	0/1:13,0:12:19.23:19,0,292	0/0:13,0:13:39.09:0,39,1523	0/0:9,0:9:20.66:0,21,662	0/0:16,0:15:39.12:0,39,1353
chr10	5301649	.	ATATGTGTGTG	A	687.34	PASS	AB=1.000;AC=6;AF=0.107;AN=56;BaseQRankSum=6.877;DP=398;FS=5.729;HRun=0;HaplotypeScore=110.1375;InbreedingCoeff=0.1979;MQ=58.64;MQ0=7;MQRankSum=-6.295;QD=8.70;ReadPosRankSum=2.121;VQSLOD=1.1642;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:4,22:24:3.01:0,3,53	0/0:7,0:7:15.04:0,15,511	0/0:7,0:4:3:0,3,25	0/0:9,0:7:0.47:0,0,1	0/0:14,0:14:30.02:0,30,739	0/0:13,0:13:39.02:0,39,848	0/0:20,0:20:49.29:0,49,1116	0/0:37,0:37:99:0,107,970	0/0:12,0:11:30.07:0,30,1030	0/0:23,0:21:60.08:0,60,1815	0/0:13,0:12:24.04:0,24,469	0/0:7,0:7:18.06:0,18,800	0/0:10,0:10:26.11:0,26,893	0/0:9,0:9:18.02:0,18,654	0/1:12,0:12:37.95:92,0,38	1/1:6,0:6:12.04:271,12,0	0/1:23,0:22:99:112,0,193	0/1:24,0:24:99:303,0,119	0/0:14,0:14:39.96:0,40,684	0/0:19,0:19:48.07:0,48,1483	0/0:13,0:12:27.04:0,27,829	0/0:9,0:9:6.02:0,6,126	0/0:7,0:6:9.50:0,10,261	0/0:12,0:12:36.03:0,36,1115	0/1:14,0:13:34.56:35,0,84	0/0:15,0:15:40.48:0,40,685	0/0:8,0:8:20.82:0,21,275	0/0:15,0:14:35.98:0,36,587
chr10	5301651	.	ATGTGTGTGTGTG	A	1413.95	PASS	AC=10;AF=0.185;AN=54;BaseQRankSum=6.076;DP=408;FS=8.671;HRun=0;HaplotypeScore=119.1595;InbreedingCoeff=0.7707;MQ=58.02;MQ0=7;MQRankSum=-5.806;QD=17.90;ReadPosRankSum=1.323;VQSLOD=1.6954;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:24:3.01:0,3,102	0/0:5,0:7:12.51:0,13,564	./.	0/0:9,0:7:0.94:0,1,1	0/0:10,0:14:15.05:0,15,700	0/0:12,0:14:24.08:0,24,967	0/0:24,0:24:23.32:0,23,1137	0/0:36,0:36:15.01:0,15,261	0/0:13,0:12:24.08:0,24,1043	0/0:23,0:21:54.17:0,54,2092	0/0:11,0:12:18.06:0,18,590	0/0:7,0:7:18.06:0,18,937	0/0:11,0:11:24.08:0,24,1047	0/0:9,0:9:12.04:0,12,645	1/1:6,2:12:6.02:207,6,0	1/1:6,0:6:12.04:322,12,0	1/1:16,0:23:9.03:251,9,0	1/1:12,11:24:18.68:700,19,0	0/0:15,0:15:33.11:0,33,955	0/0:17,0:19:30.10:0,30,1482	0/0:16,0:16:18.06:0,18,843	0/0:6,0:9:6.02:0,6,154	0/0:6,0:6:9.50:0,10,300	0/0:12,0:12:24.08:0,24,1148	1/1:8,5:13:3.01:84,3,0	0/0:15,0:16:33.02:0,33,752	0/0:7,0:8:12.04:0,12,296	0/0:11,0:14:12.04:0,12,449
chr10	5302266	.	C	CT	7159.27	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=16.229;DP=660;FS=2.786;HRun=1;HaplotypeScore=79.6573;InbreedingCoeff=0.9995;MQ=89.76;MQ0=0;MQRankSum=-1.134;QD=37.88;ReadPosRankSum=1.138;VQSLOD=5.4379;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,43:44:99:1650,117,0	0/0:10,0:10:30.10:0,30,419	0/0:25,0:25:66.10:0,66,849	0/0:24,0:24:56.92:0,57,752	0/0:19,0:19:57.18:0,57,773	0/0:14,0:14:39.13:0,39,544	0/0:29,0:29:87.29:0,87,1214	1/1:2,25:27:75.21:1029,75,0	0/0:15,0:15:45.15:0,45,629	0/0:28,0:28:81.26:0,81,1115	0/0:9,0:9:27.08:0,27,361	0/0:31,0:31:93.30:0,93,1281	0/0:28,0:28:81.24:0,81,1097	0/0:26,0:26:75.25:0,75,1048	1/1:3,22:25:69.22:969,69,0	1/1:2,24:26:33.28:975,33,0	1/1:2,33:35:90.30:1285,90,0	1/1:0,18:18:48.16:690,48,0	0/0:16,0:16:48.16:0,48,669	0/0:24,0:24:69.23:0,69,962	0/0:36,0:36:99:0,108,1489	0/0:23,0:23:69.23:0,69,964	0/0:11,0:11:33.11:0,33,459	0/0:45,0:45:99:0,132,1815	1/1:1,13:14:40.02:562,40,0	0/0:27,0:27:78.26:0,78,1077	0/0:21,0:21:60.20:0,60,838	0/0:10,0:10:30.10:0,30,419
chr10	5302583	.	A	AT	7117.33	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=0.462;DP=701;FS=1.455;HRun=1;HaplotypeScore=72.4273;InbreedingCoeff=0.9967;MQ=93.96;MQ0=0;MQRankSum=-8.116;QD=42.62;ReadPosRankSum=4.152;VQSLOD=5.0838;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,43:43:99:1798,120,0	0/0:14,0:14:36.12:0,36,467	0/0:29,0:29:81.25:0,81,1016	0/0:32,0:32:93.21:0,93,1119	0/0:23,0:23:69.20:0,69,866	0/0:22,0:22:57.17:0,57,725	0/0:19,0:19:51.17:0,51,662	0/0:37,0:37:99:0,111,1428	0/0:26,0:26:78.24:0,78,991	0/0:31,0:31:87.28:0,87,1130	0/0:14,0:14:39.13:0,39,505	0/0:18,0:18:54.18:0,54,701	0/0:29,0:29:87.28:0,87,1128	0/0:28,0:28:84.25:0,84,1073	1/1:0,25:25:75.25:1124,75,0	1/1:2,22:24:63.21:944,63,0	1/1:0,30:30:87.25:1278,87,0	1/1:0,20:20:57.19:849,57,0	0/0:16,0:16:48.14:0,48,599	0/0:13,0:13:39.11:0,39,492	0/0:53,0:53:99:0,150,1939	0/0:28,0:28:78.25:0,78,1000	0/0:16,0:16:42.14:0,42,545	0/0:23,0:23:63.17:0,63,788	1/1:0,25:25:75.25:1124,75,0	0/0:33,0:33:90.18:0,90,1145	0/0:25,0:25:75.24:0,75,974	0/0:5,0:5:14.99:0,15,160
chr10	5303029	.	TTCTC	T	764.69	PASS	AB=0.836;AC=9;AF=0.173;AN=52;BaseQRankSum=9.323;DP=379;FS=24.747;HRun=0;HaplotypeScore=60.2194;InbreedingCoeff=0.2939;MQ=56.01;MQ0=3;MQRankSum=0.397;QD=7.21;ReadPosRankSum=-0.243;VQSLOD=0.5096;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:8,0:8:21.04:0,21,420	1/1:5,0:2:0.89:2,1,0	0/0:10,0:3:8.81:0,9,75	0/0:16,0:16:48:0,48,835	0/0:9,0:9:24.01:0,24,366	0/0:17,0:17:47.96:0,48,596	0/0:25,0:24:42.25:0,42,469	0/0:22,0:22:23.94:0,24,277	0/0:15,0:15:41.60:0,42,743	0/0:9,0:9:23.97:0,24,339	0/0:9,0:9:26.97:0,27,432	0/0:8,0:8:24.04:0,24,478	0/0:7,0:7:20.96:0,21,335	0/1:18,0:18:8.19:8,0,145	0/1:2,15:17:2.94:158,0,3	./.	0/1:12,0:12:43.04:43,0,140	0/1:11,13:23:99:356,0,105	1/1:2,10:12:29.79:311,30,0	0/0:14,0:14:33:0,33,516	0/0:12,0:12:35.95:0,36,429	0/0:12,0:12:36.03:0,36,608	0/0:17,0:17:18.88:0,19,626	0/1:18,0:18:20.16:20,0,59	0/0:19,0:19:54.10:0,54,1025	0/0:21,0:21:63.06:0,63,1060	0/0:21,0:21:59.89:0,60,892
chr10	5303033	.	CTCTTTCTT	C	726.09	PASS	AC=12;AF=0.250;AN=48;BaseQRankSum=5.429;DP=374;FS=15.429;HRun=0;HaplotypeScore=86.5920;InbreedingCoeff=0.8779;MQ=55.39;MQ0=3;MQRankSum=-1.303;QD=7.33;ReadPosRankSum=0.930;VQSLOD=0.0083;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:7,0:7:15.05:0,15,541	./.	./.	0/0:17,0:17:39.13:0,39,1303	0/0:8,0:8:9.03:0,9,373	0/0:17,0:17:30.02:0,30,492	0/0:25,0:24:13.85:0,14,140	0/0:6,0:20:9.03:0,9,191	0/0:14,0:14:36.12:0,36,1172	0/0:8,0:8:18.06:0,18,448	0/0:9,0:9:21.06:0,21,534	0/0:9,0:9:24.08:0,24,729	0/0:7,0:7:15.05:0,15,464	1/1:7,11:18:9.03:229,9,0	1/1:16,0:16:4.53:17,5,0	./.	1/1:12,0:12:15.05:247,15,0	1/1:23,0:22:8.62:69,9,0	1/1:11,0:11:11:96,11,0	0/0:12,0:12:18.02:0,18,575	0/0:12,0:12:24.08:0,24,444	0/0:13,0:13:30.10:0,30,787	0/0:17,0:17:26.99:0,27,773	1/1:3,16:19:9.03:229,9,0	0/0:18,0:18:42.14:0,42,1524	0/0:21,0:21:48.16:0,48,1264	0/0:22,0:22:45.15:0,45,1378
chr10	5303236	.	C	CGGAG	847.38	PASS	AB=0.750;AC=7;AF=0.159;AN=44;BaseQRankSum=0.009;DP=98;FS=15.357;HRun=0;HaplotypeScore=21.0625;InbreedingCoeff=0.3126;MQ=64.13;MQ0=2;MQRankSum=-3.753;QD=30.26;ReadPosRankSum=0.120;VQSLOD=1.5246;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	0/0:1,0:1:3.01:0,3,37	0/0:10,0:5:2.97:0,3,41	0/0:10,0:5:1.78:0,2,61	0/0:4,0:3:3.01:0,3,63	0/0:2,0:2:6.02:0,6,107	0/0:6,0:6:18.05:0,18,339	1/1:6,1:7:7.65:248,8,0	0/0:1,0:1:3.01:0,3,53	0/0:1,0:1:3.01:0,3,54	./.	./.	0/0:3,0:3:5.99:0,6,49	0/0:2,0:2:3.01:0,3,63	1/1:3,3:6:12.04:268,12,0	0/0:6,0:6:15.05:0,15,273	0/0:3,0:2:6.02:0,6,125	0/1:6,3:8:45.02:194,0,45	0/0:5,0:4:12.03:0,12,208	0/0:2,0:2:6:0,6,72	0/0:2,0:2:3.01:0,3,49	0/0:2,0:2:3.01:0,3,63	./.	./.	1/1:1,5:6:9.03:258,9,0	0/0:2,0:2:6.02:0,6,113	0/0:2,0:2:6.02:0,6,126	./.
chr10	5304139	.	A	ACT	7191.04	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=0.383;DP=763;FS=7.652;HRun=0;HaplotypeScore=111.8568;InbreedingCoeff=0.9967;MQ=89.09;MQ0=0;MQRankSum=-2.685;QD=47.00;ReadPosRankSum=3.262;VQSLOD=5.6412;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,153,2163	0/0:13,0:13:39.10:0,39,552	0/0:28,0:28:78.26:0,78,1126	0/0:29,0:29:67.78:0,68,1040	0/0:21,0:21:60.20:0,60,875	0/0:22,0:22:63.21:0,63,926	0/0:30,0:30:84.26:0,84,1199	0/0:21,0:21:60.18:0,60,835	0/0:27,0:27:78.25:0,78,1123	0/0:18,0:18:45.15:0,45,662	0/0:12,0:12:33.11:0,33,486	0/0:30,0:30:90.28:0,90,1285	0/0:30,0:30:84.27:0,84,1217	0/0:25,0:25:75.24:0,75,1083	1/1:0,32:32:87.30:1630,87,0	1/1:2,28:30:72.25:1349,72,0	0/0:56,0:56:99:0,160,2333	0/0:31,0:31:93.30:0,93,1346	1/1:4,14:18:45.15:842,45,0	1/1:1,20:22:51.17:955,51,0	0/0:70,0:70:99:0,205,2953	1/1:1,22:25:63.06:1179,63,0	0/0:19,0:19:57.18:0,57,819	0/0:32,0:32:87.29:0,87,1281	1/1:3,23:26:66.23:1236,66,0	0/0:20,0:20:60.20:0,60,863	0/0:18,0:18:51.17:0,51,748	0/0:5,0:5:15.05:0,15,218
chr10	5305882	.	AT	A	5944.86	PASS	AB=0.529;AC=11;AF=0.196;AN=56;BaseQRankSum=12.430;DP=695;FS=10.428;HRun=1;HaplotypeScore=66.8813;InbreedingCoeff=0.8836;MQ=79.54;MQ0=0;MQRankSum=-2.669;QD=38.86;ReadPosRankSum=0.508;VQSLOD=4.8281;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,41:44:99:1742,126,0	0/0:11,0:11:33.11:0,33,524	0/0:20,0:20:58.73:0,59,837	0/0:13,0:13:33.08:0,33,486	0/0:28,0:28:81.28:0,81,1279	0/0:18,0:18:51.15:0,51,790	0/0:30,0:30:90.29:0,90,1412	1/1:0,28:28:78.25:1071,78,0	0/0:24,0:24:72.25:0,72,1148	0/0:29,0:29:87.28:0,87,1350	0/0:19,0:19:57.19:0,57,906	0/0:29,0:29:87.28:0,87,1363	0/0:22,0:22:66.19:0,66,1006	0/0:38,0:38:99:0,114,1774	0/0:25,0:25:75.24:0,75,1176	0/0:27,0:27:81.28:0,81,1295	1/1:0,27:27:75.25:1048,75,0	0/0:27,0:27:81.23:0,81,1267	0/0:22,0:22:66.21:0,66,1033	0/0:17,0:17:51.17:0,51,815	0/0:36,0:36:99:0,108,1702	0/0:27,0:27:81.24:0,81,1243	0/0:23,0:23:69.22:0,69,1078	0/0:39,0:38:99:0,114,1800	0/0:18,0:18:54.18:0,54,863	0/1:3,24:27:14.69:952,0,15	1/1:0,23:23:69.23:964,69,0	1/1:0,4:4:12.04:168,12,0
chr10	5306979	.	T	TA	5541.74	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=15.207;DP=726;FS=6.768;HRun=1;HaplotypeScore=102.3339;InbreedingCoeff=0.9991;MQ=86.85;MQ0=1;MQRankSum=-9.872;QD=36.22;ReadPosRankSum=-3.371;VQSLOD=3.2938;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,26:27:65.98:903,66,0	0/0:18,0:18:54.18:0,54,698	0/0:34,0:34:96.22:0,96,1156	0/0:23,0:23:63.03:0,63,753	0/0:30,0:30:78.20:0,78,992	0/0:17,0:17:45.06:0,45,558	0/0:30,0:30:84.23:0,84,1058	1/1:3,33:36:99:1436,99,0	0/0:26,0:26:78.24:0,78,998	0/0:29,0:29:87.25:0,87,1099	0/0:15,0:15:39.06:0,39,484	0/0:31,0:31:90.25:0,90,1123	0/0:27,0:27:78.24:0,78,996	0/0:25,0:25:75.22:0,75,945	0/0:33,0:33:90.29:0,90,1167	0/0:23,0:23:66.21:0,66,856	1/1:4,18:22:54.04:730,54,0	0/0:20,0:20:57.19:0,57,738	0/0:22,0:22:60.18:0,60,762	0/0:17,0:17:51.14:0,51,620	0/0:51,0:50:99:0,144,1856	0/0:25,0:25:75.19:0,75,949	0/0:20,0:20:57.18:0,57,735	0/0:26,0:26:78.22:0,78,982	0/0:31,0:31:86.46:0,86,1064	1/1:6,21:27:31.65:937,32,0	1/1:4,30:34:92.90:1223,93,0	1/1:0,7:7:21.07:313,21,0
chr10	5307005	.	C	CCCTT	8080.55	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=13.486;DP=778;FS=17.846;HRun=0;HaplotypeScore=155.4960;InbreedingCoeff=0.9978;MQ=74.23;MQ0=1;MQRankSum=-15.567;QD=50.19;ReadPosRankSum=-2.321;VQSLOD=4.2219;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,13:27:45.15:1057,45,0	0/0:16,0:16:39.13:0,39,674	0/0:36,0:36:81.25:0,81,1298	0/0:31,0:30:51.15:0,51,851	0/0:33,0:32:81.28:0,81,1400	0/0:17,0:17:48.16:0,48,829	0/0:33,0:33:72.21:0,72,1213	1/1:25,11:36:60.18:1306,60,0	0/0:21,0:21:48.15:0,48,802	0/0:35,0:35:90.78:0,91,1550	0/0:10,0:10:30.10:0,30,516	0/0:26,0:26:63.22:0,63,1079	0/0:25,0:25:66.23:0,66,1133	0/0:29,0:29:81.26:0,81,1372	0/0:36,0:36:93.31:0,93,1574	0/0:25,0:25:57.18:0,57,958	1/1:10,17:27:66.23:1607,66,0	0/0:22,0:22:57.16:0,57,954	0/0:29,0:29:63.22:0,63,1074	0/0:28,0:28:75.24:0,75,1233	0/0:46,0:45:99:0,99,1673	0/0:23,0:23:57.18:0,57,952	0/0:28,0:28:75.21:0,75,1207	0/0:31,0:31:84.20:0,84,1381	0/0:37,0:37:93.27:0,93,1545	1/1:4,21:25:17.39:1613,17,0	1/1:11,23:33:72.25:1816,72,0	1/1:3,9:12:27.09:681,27,0
chr10	5307406	.	GGT	G	474.37	PASS	AB=0.913;AC=15;AF=0.288;AN=52;BaseQRankSum=3.206;DP=638;FS=2.541;HRun=0;HaplotypeScore=93.7503;InbreedingCoeff=-0.2385;MQ=64.65;MQ0=9;MQRankSum=-0.176;QD=1.46;ReadPosRankSum=-0.176;VQSLOD=1.7528;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,4:38:6.58:0,7,386	0/1:8,1:9:17.37:17,0,163	./.	0/0:29,0:18:0:0,0,0	0/1:20,2:21:36.83:37,0,264	0/0:18,0:16:14.51:0,15,217	0/1:32,1:34:16.69:17,0,315	./.	0/1:9,4:13:28.39:103,0,28	0/1:23,2:24:43.25:43,0,165	0/1:13,0:12:8.10:8,0,39	0/0:27,0:27:36.12:0,36,534	0/0:19,0:19:23.86:0,24,301	0/0:15,0:16:21.07:0,21,302	0/1:21,1:24:8.45:8,0,247	0/0:23,0:23:30.01:0,30,285	1/1:12,0:16:5.68:28,6,0	0/1:24,1:27:56.97:57,0,268	0/0:15,0:15:5.98:0,6,47	0/0:21,0:21:25.26:0,25,249	0/1:49,3:51:58.37:58,0,303	0/0:24,0:23:21.02:0,21,206	0/0:13,0:13:12.04:0,12,176	0/1:30,1:31:9.90:10,0,535	0/0:22,0:22:33.09:0,33,468	0/1:26,3:28:61.46:61,0,271	0/1:14,3:17:79.47:79,0,101	0/1:11,3:14:94.32:94,0,229
chr10	5307451	.	G	GTC	2883.39	PASS	AB=0.772;AC=16;AF=0.286;AN=56;BaseQRankSum=-3.576;DP=581;FS=2.782;HRun=0;HaplotypeScore=89.1547;InbreedingCoeff=0.6913;MQ=59.42;MQ0=13;MQRankSum=-0.410;QD=13.60;ReadPosRankSum=-0.623;VQSLOD=3.1359;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:39,0:39:4.37:446,4,0	0/0:11,0:11:26.77:0,27,319	0/0:23,0:10:20.65:0,21,181	0/0:21,0:5:14.93:0,15,133	0/0:23,0:23:66.91:0,67,652	0/0:13,0:11:32.79:0,33,321	0/0:31,0:33:74.33:0,74,791	1/1:21,0:21:56.99:506,57,0	0/0:18,0:18:42.91:0,43,362	0/0:22,0:22:59.99:0,60,569	0/0:9,0:8:18:0,18,178	0/0:34,0:34:95.87:0,96,1029	0/0:19,0:19:28.88:0,29,432	0/0:13,0:13:23.71:0,24,372	0/0:18,0:18:9.90:0,10,415	0/1:4,22:28:0.45:261,0,0	1/1:20,0:20:35.90:259,36,0	0/0:19,0:20:16.89:0,17,426	1/1:11,0:11:32.95:339,33,0	1/1:12,3:14:9.26:379,9,0	0/0:34,0:34:52.14:0,52,649	0/1:3,14:16:4.80:224,0,5	0/0:12,0:12:27.01:0,27,285	0/0:26,0:26:70.79:0,71,842	0/0:20,0:20:51.07:0,51,655	0/1:24,0:23:2.19:247,0,2	1/1:17,0:17:6.44:243,6,0	0/1:20,0:20:18.09:163,0,18
chr10	5308729	.	AC	A	8523.30	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=16.320;DP=581;FS=0.317;HRun=1;HaplotypeScore=70.8866;InbreedingCoeff=0.9993;MQ=85.05;MQ0=0;MQRankSum=-6.932;QD=36.12;ReadPosRankSum=1.681;VQSLOD=5.0399;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,41:41:99:1467,105,0	0/0:8,0:8:24.03:0,24,354	0/0:23,0:23:48.94:0,49,835	0/0:18,0:18:53.56:0,54,635	0/0:16,0:16:48.15:0,48,729	0/0:21,0:21:63.21:0,63,997	0/0:18,0:18:54.15:0,54,816	1/1:0,27:27:81.24:1097,81,0	0/0:13,0:13:39.12:0,39,599	0/0:23,0:23:69.22:0,69,1059	0/0:10,0:10:30.10:0,30,479	0/0:16,0:16:48.16:0,48,767	0/0:24,0:24:72.23:0,72,1109	0/0:18,0:18:54.18:0,54,859	0/0:22,0:21:66.22:0,66,1046	1/1:0,17:17:48.16:671,48,0	1/1:0,36:36:90.30:1257,90,0	0/0:29,0:29:87.24:0,87,1360	1/1:0,18:18:54.13:716,54,0	1/1:0,18:18:48.16:671,48,0	0/0:18,0:18:54.17:0,54,839	1/1:0,16:16:42.10:565,42,0	0/0:25,0:25:69.22:0,69,1071	0/0:27,0:27:81.19:0,81,1216	0/0:15,0:15:45.14:0,45,688	1/1:1,23:24:24.23:864,24,0	1/1:0,18:18:39.13:545,39,0	1/1:0,21:21:48.16:670,48,0
chr10	5310234	.	TACAC	T	1290.63	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=5.864;DP=613;FS=3.477;HRun=0;HaplotypeScore=120.8158;InbreedingCoeff=0.7822;MQ=63.53;MQ0=10;MQRankSum=-0.112;QD=11.32;ReadPosRankSum=1.086;VQSLOD=2.9577;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:15.02:0,15,297	0/0:12,0:12:24.08:0,24,553	0/0:28,0:10:3.01:0,3,59	0/0:24,0:12:0.47:0,0,1	0/0:21,0:21:36.12:0,36,781	0/0:17,0:19:26.82:0,27,528	0/0:23,0:24:38.87:0,39,824	0/0:21,0:21:30.09:0,30,553	0/0:28,1:33:68.42:0,68,1327	0/0:22,0:21:37.41:0,37,750	0/1:19,0:19:1.42:1,0,587	0/0:15,0:15:20.81:0,21,409	0/0:15,0:20:27.68:0,28,706	0/0:16,0:18:35.59:0,36,721	0/0:9,0:17:21.07:0,21,405	1/1:10,12:23:33.11:505,33,0	0/0:28,0:27:9.03:0,9,156	0/0:20,0:22:41.85:0,42,895	1/1:15,6:20:13.68:194,14,0	1/1:13,15:30:30.06:431,30,0	0/0:26,0:26:42.08:0,42,874	1/1:10,10:21:21.06:314,21,0	0/0:17,0:20:20.69:0,21,420	0/0:33,0:34:65.83:0,66,1373	0/0:5,0:19:18.44:0,18,315	0/0:15,0:15:36.12:0,36,631	0/0:16,0:16:18:0,18,251	0/0:5,0:5:3.01:0,3,42
chr10	5310269	.	A	ACACT	3003.95	PASS	AB=1.000;AC=20;AF=0.357;AN=56;BaseQRankSum=0.349;DP=580;FS=10.784;HRun=0;HaplotypeScore=118.8444;InbreedingCoeff=0.5154;MQ=56.74;MQ0=5;MQRankSum=-1.966;QD=11.51;ReadPosRankSum=-2.362;VQSLOD=2.1374;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:31,0:32:13.74:279,14,0	0/1:10,0:10:13.14:13,0,418	0/0:20,0:14:41.97:0,42,386	0/0:18,0:11:23.18:0,23,249	0/0:20,0:20:50.98:0,51,722	0/0:18,0:17:29.57:0,30,413	0/0:30,0:30:81.01:0,81,994	1/1:22,0:22:62.94:659,63,0	0/0:30,0:30:53.59:0,54,1117	0/0:21,0:20:50.36:0,50,699	0/0:15,0:15:38.98:0,39,489	0/0:20,0:20:51:0,51,569	0/0:18,0:18:51:0,51,744	0/0:18,0:18:4.21:0,4,663	0/1:21,0:21:99:201,0,195	0/1:23,0:23:24.54:117,0,25	1/1:3,19:28:9.03:206,9,0	0/0:17,0:17:42.13:0,42,776	1/1:15,0:15:22.01:212,22,0	0/1:26,0:26:5.74:162,0,6	0/0:24,0:24:57.03:0,57,794	0/1:15,0:15:23.53:53,0,24	0/0:15,0:15:33:0,33,440	0/0:34,0:34:90.11:0,90,1275	0/1:18,0:18:49.19:247,0,49	1/1:21,0:22:11.82:547,12,0	1/1:3,0:20:18.23:341,18,0	1/1:8,0:8:20.92:164,21,0
chr10	5310423	.	GCACACACACACA	G	1756.25	PASS	AB=0.851;AC=6;AF=0.111;AN=54;BaseQRankSum=3.824;DP=438;FS=9.785;HRun=0;HaplotypeScore=138.2014;InbreedingCoeff=0.5734;MQ=60.18;MQ0=18;MQRankSum=-4.655;QD=19.51;ReadPosRankSum=2.239;VQSLOD=2.2145;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:30,12:40:0:0,0,0	0/0:4,0:4:9.03:0,9,458	0/0:27,0:15:6.02:0,6,120	0/0:21,0:13:9.03:0,9,289	0/0:11,0:10:12.04:0,12,623	0/0:17,0:16:36.12:0,36,1888	0/0:15,0:15:36.10:0,36,1770	0/0:9,0:10:9.02:0,9,180	0/0:11,0:11:27.09:0,27,1278	0/0:13,0:12:24.05:0,24,1091	0/0:18,0:17:27.09:0,27,1329	0/0:14,0:14:21.07:0,21,1144	0/0:7,0:7:21.07:0,21,1120	0/0:11,0:10:15.03:0,15,728	0/0:13,0:12:18.04:0,18,714	0/0:5,0:17:3.01:0,3,74	0/1:13,0:13:7.84:263,0,8	0/0:20,0:19:46.71:0,47,2116	0/0:10,0:8:6.02:0,6,117	0/0:8,0:10:9.03:0,9,199	0/0:23,0:21:30.10:0,30,1454	0/0:12,0:13:21.07:0,21,534	0/0:7,0:7:9.03:0,9,392	0/0:31,0:31:42.14:0,42,2061	0/0:21,0:21:18.06:0,18,970	1/1:7,11:21:38.20:1351,38,0	1/1:7,4:12:9.03:263,9,0	./.
chr10	5310509	.	GAGAGAA	G	1717.36	PASS	AB=1.000;AC=16;AF=0.286;AN=56;BaseQRankSum=2.175;DP=559;FS=5.925;HRun=0;HaplotypeScore=123.2982;InbreedingCoeff=0.0783;MQ=64.60;MQ0=31;MQRankSum=0.061;QD=6.92;ReadPosRankSum=-1.404;VQSLOD=1.8556;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:34,0:31:99:178,0,225	0/0:9,0:9:26.61:0,27,229	0/0:31,0:13:27.10:0,27,224	0/0:49,0:21:47.29:0,47,462	0/0:23,0:22:49.79:0,50,412	0/1:10,0:9:18.96:19,0,126	0/1:16,0:14:1.62:2,0,260	0/1:20,0:17:23.36:246,0,23	0/0:16,0:16:36.06:0,36,513	0/0:21,0:21:4.05:0,4,355	0/0:20,0:19:47.02:0,47,418	0/0:19,0:17:47.29:0,47,422	0/1:12,0:12:4.05:4,0,286	0/0:14,0:14:25.97:0,26,201	0/0:18,0:16:23.21:0,23,358	0/1:16,0:16:99:101,0,121	0/1:21,0:19:99:145,0,228	0/0:16,0:13:31.77:0,32,360	1/1:26,0:25:65.88:572,66,0	1/1:3,18:20:6.36:38,6,0	0/0:17,0:17:26.34:0,26,246	1/1:4,20:24:2.34:16,2,0	0/0:16,0:16:32.98:0,33,312	0/0:28,0:27:46.75:0,47,447	0/0:14,0:14:18.02:0,18,166	0/1:22,0:22:99:269,0,214	0/1:16,0:16:99:197,0,151	0/1:10,0:7:18.55:94,0,19
chr10	5310513	.	GAA	G	2147.94	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=3.165;DP=539;FS=8.407;HRun=4;HaplotypeScore=95.4536;InbreedingCoeff=0.8504;MQ=68.32;MQ0=28;MQRankSum=-1.244;QD=10.79;ReadPosRankSum=-0.760;VQSLOD=-0.4304;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:31,0:29:31.52:305,32,0	0/0:10,0:10:29.76:0,30,258	0/0:35,0:16:24.50:0,24,254	0/0:52,0:23:47.13:0,47,461	0/0:23,0:23:56.33:0,56,468	0/0:11,0:10:22.98:0,23,180	0/0:17,0:15:38.34:0,38,325	1/1:7,12:16:41.78:346,42,0	0/0:16,0:16:17.12:0,17,185	0/0:20,0:20:50.75:0,51,455	0/0:18,0:17:38.76:0,39,353	0/0:19,0:17:46.97:0,47,397	0/0:12,0:12:19.98:0,20,205	0/0:14,0:14:28.33:0,28,227	0/0:14,0:13:24.20:0,24,255	1/1:15,0:15:5.09:155,5,0	0/1:20,0:18:11.02:175,0,11	0/0:13,0:10:19.58:0,20,165	1/1:25,0:24:67.73:577,68,0	1/1:20,0:19:5.47:36,5,0	0/0:16,0:16:24.37:0,24,192	1/1:23,0:23:2.41:16,2,0	0/0:12,0:12:27.27:0,27,256	0/0:25,0:24:35.82:0,36,323	0/0:13,0:13:24.02:0,24,221	1/1:21,0:21:37.66:346,38,0	1/1:16,0:16:33.78:282,34,0	1/1:9,0:7:14.90:112,15,0
chr10	5310728	.	C	CAT	4610.93	PASS	AB=0.594;AC=18;AF=0.321;AN=56;BaseQRankSum=-7.738;DP=449;FS=3.231;HRun=0;HaplotypeScore=62.0785;InbreedingCoeff=0.8033;MQ=85.88;MQ0=0;MQRankSum=-0.344;QD=28.64;ReadPosRankSum=-1.859;VQSLOD=5.3678;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,0:32:39.02:346,39,0	0/0:11,0:11:30.10:0,30,382	0/0:15,0:15:24.07:0,24,289	0/0:16,0:16:18.37:0,18,247	0/0:9,0:9:15.05:0,15,190	0/0:10,0:9:17.66:0,18,229	0/0:20,0:20:39.12:0,39,496	1/1:6,20:27:63.19:995,63,0	0/0:24,0:24:63.18:0,63,787	0/0:20,0:20:45.14:0,45,573	0/0:13,0:13:33.11:0,33,419	0/0:15,0:15:39.11:0,39,482	0/0:12,0:12:30.10:0,30,380	0/0:18,0:18:54.16:0,54,674	0/0:15,0:15:36.11:0,36,458	1/1:2,8:10:24.08:387,24,0	1/1:2,15:18:48.16:802,48,0	0/0:15,0:15:45.14:0,45,573	1/1:4,8:12:21.07:341,21,0	0/1:4,7:11:20.14:216,0,20	0/0:37,0:37:99:0,99,1260	1/1:3,4:7:3.01:50,3,0	0/0:6,0:6:15.05:0,15,191	0/0:25,0:25:54.17:0,54,680	0/0:7,0:7:15.05:0,15,191	0/1:4,10:15:8.10:409,0,8	1/1:1,21:22:13.02:765,13,0	1/1:1,6:7:18.06:301,18,0
chr10	5311032	.	GC	G	4540.87	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=11.502;DP=380;FS=2.552;HRun=1;HaplotypeScore=48.2359;InbreedingCoeff=0.9590;MQ=88.28;MQ0=0;MQRankSum=-3.525;QD=35.48;ReadPosRankSum=1.857;VQSLOD=4.8223;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,19:19:36.12:500,36,0	0/0:5,0:5:15.05:0,15,225	0/0:11,0:11:32.82:0,33,404	0/0:21,0:21:49.03:0,49,730	0/0:10,0:10:27.05:0,27,385	0/0:5,0:5:15.05:0,15,229	0/0:20,0:20:60.16:0,60,862	1/1:0,9:9:27.09:373,27,0	0/0:17,0:17:51.13:0,51,735	0/0:21,0:21:63.07:0,63,860	0/0:9,0:9:27.09:0,27,397	0/0:14,0:14:42.10:0,42,614	0/0:8,0:8:24:0,24,315	0/0:12,0:12:36.11:0,36,528	0/0:3,0:3:9.03:0,9,138	1/1:0,10:10:27.09:377,27,0	1/1:0,26:26:63.21:878,63,0	0/0:20,0:20:60.14:0,60,884	1/1:0,17:17:51.14:679,51,0	1/1:0,3:3:9.03:122,9,0	0/0:35,0:35:99:0,105,1539	1/1:0,12:12:30.10:412,30,0	0/0:2,0:2:6.02:0,6,91	0/0:29,0:29:84.20:0,84,1230	0/0:10,0:10:30.07:0,30,433	1/1:0,16:16:45.14:613,45,0	1/1:0,7:7:15.05:209,15,0	1/1:0,9:9:27.09:377,27,0
chr10	5312509	.	G	GC	1608.96	PASS	AB=0.632;AC=14;AF=0.250;AN=56;BaseQRankSum=-4.315;DP=489;FS=2.257;HRun=9;HaplotypeScore=53.6195;InbreedingCoeff=0.7526;MQ=78.69;MQ0=0;MQRankSum=-0.254;QD=14.76;ReadPosRankSum=-1.796;VQSLOD=3.2720;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,102,885	0/0:7,0:7:14.99:0,15,130	0/0:23,1:24:8.41:0,8,256	0/0:22,0:20:4.96:0,5,143	0/0:12,0:12:29.99:0,30,260	0/0:11,0:12:32.01:0,32,262	0/0:22,0:22:41.98:0,42,365	0/1:2,9:11:2.05:184,0,2	0/0:15,0:15:38.99:0,39,339	0/0:21,0:21:44.97:0,45,389	0/0:11,0:11:29.99:0,30,260	0/0:11,0:11:29.97:0,30,256	0/0:14,0:14:23.98:0,24,208	0/0:14,0:14:38.96:0,39,335	0/0:21,0:21:56.97:0,57,495	1/1:5,13:18:12.84:371,13,0	0/0:28,0:28:77.95:0,78,670	0/0:21,0:21:53.98:0,54,469	1/1:5,12:17:30.06:322,30,0	1/1:4,10:14:1.02:239,1,0	0/0:35,0:35:80.92:0,81,699	1/1:1,14:16:41.95:445,42,0	0/0:10,0:10:26.98:0,27,234	0/0:20,0:20:53.96:0,54,464	0/0:20,0:20:47.95:0,48,417	0/1:9,2:15:8.41:87,0,8	1/1:4,1:13:17.32:109,17,0	1/1:3,0:5:5.68:28,6,0
chr10	5312986	.	GACACACACACACACACACAC	G	5815.54	PASS	AB=0.684;AC=14;AF=0.250;AN=56;BaseQRankSum=10.862;DP=644;FS=1.837;HRun=0;HaplotypeScore=298.3879;InbreedingCoeff=0.6017;MQ=63.82;MQ0=19;MQRankSum=-6.823;QD=25.96;ReadPosRankSum=2.036;VQSLOD=3.4394;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:27,1:34:99:101,0,150	0/0:6,0:6:14.04:0,14,1224	0/0:36,0:21:15.02:0,15,302	0/0:49,0:25:6.49:0,6,123	0/0:15,0:15:27.09:0,27,2165	0/0:9,0:11:21.07:0,21,1223	0/0:24,0:27:46.03:0,46,2550	0/0:21,0:20:20.94:0,21,234	0/0:14,0:16:33.11:0,33,2349	0/0:21,0:30:54.62:0,55,3114	0/0:4,0:8:9.03:0,9,747	0/0:22,0:21:45.63:0,46,3583	0/0:10,0:12:27.09:0,27,1712	0/0:12,0:14:24.08:0,24,1915	0/0:13,0:22:25.63:0,26,1885	1/1:11,3:25:36.12:1043,36,0	1/1:12,15:27:15.05:679,15,0	0/0:19,0:20:45.15:0,45,3154	0/1:14,0:20:61.67:82,0,62	0/1:6,0:17:21.02:387,0,21	0/0:37,0:36:66.21:0,66,4604	0/1:8,0:25:5.97:142,0,6	0/0:19,0:19:27.08:0,27,1392	0/0:29,0:31:69.24:0,69,4823	0/0:23,0:22:30.56:0,31,2153	1/1:16,21:38:63.08:1680,63,0	1/1:10,13:23:20.90:1060,21,0	1/1:3,6:9:12.04:641,12,0
chr10	5313528	.	G	GA	2179.36	PASS	AB=0.765;AC=8;AF=0.143;AN=56;BaseQRankSum=-8.067;DP=551;FS=0.474;HRun=8;HaplotypeScore=59.0921;InbreedingCoeff=0.7223;MQ=58.07;MQ0=28;MQRankSum=1.097;QD=18.16;ReadPosRankSum=0.892;VQSLOD=3.4743;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:78.01:0,78,713	0/0:9,0:9:15:0,15,137	0/1:21,0:5:4.01:4,0,16	0/0:19,0:4:8.94:0,9,71	0/0:18,0:18:48.01:0,48,439	0/0:13,0:13:33.01:0,33,302	0/0:24,0:24:57:0,57,517	0/0:27,0:24:48.25:0,48,461	0/0:25,0:25:56.98:0,57,511	0/0:12,0:12:33.02:0,33,302	0/0:22,0:22:57.01:0,57,514	0/0:25,0:25:47.09:0,47,504	0/0:12,0:12:27.01:0,27,247	0/0:22,0:22:60:0,60,539	0/0:17,0:17:35.96:0,36,315	0/0:10,0:10:23.99:0,24,215	1/1:2,27:29:75.22:865,75,0	0/0:20,0:20:53.99:0,54,486	0/0:20,0:21:53.05:0,53,469	0/0:6,0:6:18:0,18,160	0/0:22,0:23:38.04:0,38,335	0/0:16,0:16:38.99:0,39,352	0/0:14,0:14:29.67:0,30,268	0/0:26,0:26:68.07:0,68,610	0/0:15,0:15:33:0,33,296	1/1:6,23:29:17.31:673,17,0	1/1:7,25:32:66.20:759,66,0	0/1:1,8:9:21.43:29,0,21
chr10	5313542	.	G	GAA	638.83	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=-2.249;DP=558;FS=6.995;HRun=10;HaplotypeScore=77.6538;InbreedingCoeff=0.7363;MQ=65.05;MQ0=9;MQRankSum=0.146;QD=15.21;ReadPosRankSum=-2.112;VQSLOD=1.5030;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:75.02:0,75,763	0/0:11,0:11:30.03:0,30,292	0/1:18,0:9:1.68:2,0,155	0/0:15,0:9:20.24:0,20,190	0/0:22,0:23:47.81:0,48,539	0/0:14,0:15:38.79:0,39,363	0/0:27,0:27:68.75:0,69,674	1/1:6,16:23:54.05:733,54,0	0/0:25,0:27:77.60:0,78,741	0/0:16,0:16:39.03:0,39,391	0/0:17,0:17:30:0,30,299	0/0:21,0:21:30.72:0,31,575	0/0:15,0:15:32.98:0,33,328	0/0:22,0:22:51.08:0,51,511	0/0:18,0:19:48.05:0,48,480	0/0:11,0:11:33.06:0,33,329	0/0:31,0:31:80.91:0,81,789	0/0:21,0:21:51.08:0,51,518	0/0:27,0:28:62.79:0,63,681	0/0:11,0:11:30.03:0,30,298	0/0:19,0:18:45.05:0,45,458	0/0:14,0:14:39.07:0,39,390	0/0:14,0:14:39.05:0,39,381	0/0:29,0:29:77.84:0,78,764	0/0:14,0:14:33.02:0,33,327	0/0:27,0:27:54.05:0,54,548	0/0:24,0:26:56.56:0,57,542	0/0:8,0:8:11.97:0,12,107
chr10	5313740	.	GGGA	G	2445.16	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.543;DP=693;FS=3.209;HRun=0;HaplotypeScore=101.5785;InbreedingCoeff=0.9983;MQ=78.30;MQ0=0;MQRankSum=-2.074;QD=40.08;ReadPosRankSum=1.993;VQSLOD=5.0060;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,114,2483	0/0:10,0:10:30.10:0,30,669	0/0:17,0:17:38.25:0,38,778	0/0:15,0:15:39.03:0,39,730	0/0:22,0:22:57.17:0,57,1163	0/0:11,0:11:30.10:0,30,654	0/0:27,0:27:81.27:0,81,1707	0/0:26,0:26:69.22:0,69,1459	0/0:25,0:25:75.22:0,75,1548	0/0:27,0:27:75.24:0,75,1561	0/0:20,0:20:60.21:0,60,1298	0/0:27,0:27:72.23:0,72,1564	0/0:21,0:21:63.20:0,63,1346	0/0:35,0:35:99:0,102,2122	1/1:1,31:32:90.31:1469,90,0	0/0:23,0:23:69.23:0,69,1498	0/0:32,0:32:90.31:0,90,2007	0/0:14,0:14:39.10:0,39,821	0/0:25,0:25:66.20:0,66,1352	0/0:23,0:23:66.23:0,66,1473	0/0:68,0:68:99:0,190,4012	0/0:29,0:29:78.22:0,78,1610	0/0:17,0:17:45.14:0,45,963	0/0:26,0:26:78.21:0,78,1573	1/1:3,26:29:69.19:1097,69,0	0/0:16,0:16:48.16:0,48,1050	0/0:25,0:25:69.24:0,69,1513	0/0:8,0:8:24.08:0,24,536
chr10	5315064	.	TCACC	T	8526.55	PASS	AB=0.514;AC=19;AF=0.339;AN=56;BaseQRankSum=12.391;DP=428;FS=17.117;HRun=0;HaplotypeScore=78.3708;InbreedingCoeff=0.8989;MQ=73.18;MQ0=0;MQRankSum=-10.284;QD=52.63;ReadPosRankSum=-0.727;VQSLOD=4.2621;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,17:17:39.13:809,39,0	0/0:2,0:2:6.02:0,6,174	0/0:12,0:11:31.91:0,32,765	0/0:9,0:9:11.75:0,12,500	0/0:19,0:19:57.20:0,57,1624	0/0:20,0:20:54.18:0,54,1502	0/0:11,0:11:33.10:0,33,845	1/1:0,17:17:51.14:911,51,0	0/0:18,0:18:54.16:0,54,1408	0/0:24,0:24:72.25:0,72,2040	0/0:14,0:14:42.14:0,42,1216	0/0:19,0:19:57.15:0,57,1555	0/0:12,0:12:36.08:0,36,965	0/0:13,0:13:39.11:0,39,1025	0/0:16,0:16:45.14:0,45,1198	0/1:1,18:19:38.79:848,0,39	1/1:6,15:21:51.04:879,51,0	0/0:13,0:13:36.12:0,36,1043	1/1:0,25:25:75.24:1444,75,0	1/1:0,17:17:48.13:943,48,0	0/0:19,0:19:57.18:0,57,1470	1/1:0,11:11:33.11:678,33,0	0/0:11,0:11:33.10:0,33,820	0/0:17,0:17:48.11:0,48,1183	0/0:17,0:17:51.18:0,51,1437	1/1:0,18:18:54.19:1110,54,0	1/1:0,9:9:21.06:402,21,0	1/1:0,8:8:24.08:503,24,0
chr10	5315097	.	C	CTT	1394.79	PASS	AB=0.917;AC=10;AF=0.179;AN=56;BaseQRankSum=1.795;DP=356;FS=1.333;HRun=11;HaplotypeScore=70.2590;InbreedingCoeff=0.6563;MQ=60.30;MQ0=8;MQRankSum=-6.948;QD=16.80;ReadPosRankSum=-2.545;VQSLOD=2.0540;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:42.82:0,43,457	0/0:1,0:1:3:0,3,29	0/0:7,0:6:5.97:0,6,55	0/0:3,0:3:1.55:0,2,4	0/0:19,0:19:32.73:0,33,314	0/0:16,0:17:35.99:0,36,344	0/1:6,0:6:8.23:8,0,101	0/1:12,0:12:59.44:81,0,59	0/0:9,0:11:22.58:0,23,208	0/0:23,0:23:44.97:0,45,436	0/0:11,0:12:17.95:0,18,225	0/0:12,0:12:24.02:0,24,233	0/0:8,0:9:20.76:0,21,186	0/0:7,0:6:5.99:0,6,58	0/0:11,0:11:27.02:0,27,259	0/0:12,0:12:14.97:0,15,145	1/1:7,13:20:42.10:581,42,0	0/0:22,0:19:51.08:0,51,495	0/0:19,0:18:26.98:0,27,259	0/0:11,0:12:20.86:0,21,181	0/0:8,0:8:18.02:0,18,175	0/0:11,0:11:17.96:0,18,174	0/0:7,0:7:18.02:0,18,175	0/0:9,0:9:11.97:0,12,116	0/0:18,0:18:38.99:0,39,378	1/1:8,8:16:24:321,24,0	1/1:2,9:12:27.04:353,27,0	1/1:10,4:13:17.98:215,18,0
chr10	5315777	.	A	ATG	416.77	PASS	AB=1.000;AC=21;AF=0.457;AN=46;BaseQRankSum=2.910;DP=540;FS=6.163;HRun=0;HaplotypeScore=108.2078;InbreedingCoeff=0.1266;MQ=35.65;MQ0=3;MQRankSum=-1.779;QD=1.53;ReadPosRankSum=-0.811;VQSLOD=1.6092;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:11:0.16:1,0,0	1/1:13,0:13:1.83:3,2,0	0/0:12,0:7:5.97:0,6,47	0/1:5,0:5:0:0,0,0	0/0:28,0:28:2.62:0,3,22	0/0:19,0:19:2.85:0,3,24	0/0:8,0:7:3.01:0,3,39	1/1:7,2:8:9:125,9,0	./.	0/1:43,0:40:99:115,0,113	./.	0/1:17,0:17:15.22:22,0,15	0/0:21,0:21:2.74:0,3,13	0/0:21,0:21:0:0,0,0	./.	1/1:16,0:16:2.99:24,3,0	./.	0/1:6,0:6:11:11,0,48	0/1:16,0:11:11.75:25,0,12	1/1:38,1:39:6.01:77,6,0	0/0:4,0:4:6.02:0,6,77	1/1:27,1:28:3.90:54,4,0	0/1:28,0:28:0:0,0,0	./.	0/0:42,0:42:0.81:0,1,19	1/1:15,0:14:10.18:70,10,0	0/1:27,0:27:15.03:15,0,31	0/0:12,0:12:2.90:0,3,20
chr10	5315787	.	G	GT	168.40	PASS	AB=0.667;AC=15;AF=0.938;AN=16;DP=41;FS=0.000;HRun=1;HaplotypeScore=10.7395;MQ=38.72;MQ0=0;QD=6.74;VQSLOD=0.4883;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	1/1:1,1:2:2.68:11,3,0	./.	./.	1/1:2,1:3:3:25,3,0	./.	1/1:1,0:1:2.97:20,3,0	./.	./.	1/1:2,3:5:10.79:56,11,0	./.	./.	1/1:3,0:3:5.98:46,6,0	./.	./.	./.	./.	0/1:1,1:2:0:0,0,0	./.	./.	./.	./.	1/1:1,3:4:2.99:24,3,0	./.	1/1:4,1:5:10.87:56,11,0	./.	./.	./.
chr10	5316404	.	CCAACAA	C	5907.27	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=13.830;DP=685;FS=20.175;HRun=0;HaplotypeScore=152.9731;InbreedingCoeff=0.9829;MQ=72.12;MQ0=13;MQRankSum=-10.689;QD=26.85;ReadPosRankSum=-0.496;VQSLOD=3.2972;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:10,30:39:30.10:634,30,0	0/0:5,0:5:15.05:0,15,423	0/0:38,0:26:48.71:0,49,974	0/0:23,0:22:40.38:0,40,899	0/0:32,0:33:84.23:0,84,2457	0/0:22,0:22:51.17:0,51,1603	0/0:25,0:26:72.19:0,72,2100	1/1:11,23:34:69.05:1147,69,0	0/0:22,0:22:54.18:0,54,1675	0/0:30,0:30:66.19:0,66,1905	0/0:23,0:23:48.16:0,48,1437	0/0:26,0:26:72.23:0,72,2138	0/0:38,0:38:93.32:0,93,2833	0/0:23,0:23:60.19:0,60,1763	0/0:35,0:35:93.26:0,93,2642	1/1:13,7:16:27.08:537,27,0	1/1:11,11:20:11.97:212,12,0	0/0:32,0:32:84.25:0,84,2414	1/1:3,9:12:24.08:476,24,0	1/1:9,14:20:27.09:530,27,0	0/0:25,0:25:56:0,56,1806	1/1:11,13:22:36.12:774,36,0	0/0:15,0:15:33.11:0,33,902	0/0:22,0:23:60.15:0,60,1837	0/0:25,0:25:72.23:0,72,2095	1/1:5,17:21:24.17:909,24,0	1/1:13,7:17:24.08:496,24,0	1/1:0,3:3:9.03:194,9,0
chr10	5316566	.	AAAGGAAGGAAGGAAGG	A	483.63	PASS	AC=2;AF=0.040;AN=50;BaseQRankSum=3.003;DP=657;FS=6.575;HRun=0;HaplotypeScore=289.0473;InbreedingCoeff=0.7198;MQ=63.88;MQ0=4;MQRankSum=-2.972;QD=13.82;ReadPosRankSum=0.470;VQSLOD=1.5310;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:15.75:0,16,1428	0/0:11,0:11:21.07:0,21,1302	./.	./.	0/0:16,0:16:30.10:0,30,1566	0/0:18,0:18:39.12:0,39,2097	0/0:27,0:27:42.14:0,42,2326	0/0:23,0:21:3.01:0,3,49	0/0:32,0:32:48.16:0,48,2720	0/0:30,0:30:60.21:0,60,3292	0/0:17,0:17:20.75:0,21,961	0/0:34,0:34:60.21:0,60,3660	0/0:23,0:25:51.15:0,51,2921	0/0:30,0:32:51.18:0,51,2860	1/1:15,20:35:15.05:571,15,0	0/0:26,0:26:42.14:0,42,2081	0/0:38,0:38:51.15:0,51,2245	0/0:24,0:25:45.15:0,45,2759	0/0:11,0:11:12.04:0,12,712	0/0:9,0:9:15.05:0,15,871	0/0:38,0:39:72.25:0,72,4065	0/0:13,0:13:24.08:0,24,1021	0/0:17,0:17:36.12:0,36,1926	0/0:40,0:40:78.25:0,78,4461	./.	0/0:20,0:20:36.12:0,36,1876	0/0:25,0:25:39.13:0,39,1806	0/0:3,0:3:6.02:0,6,385
chr10	5316619	.	A	AAGGGAGGG	9358.44	PASS	AB=1.000;AC=18;AF=0.321;AN=56;BaseQRankSum=2.658;DP=692;FS=1.367;HRun=0;HaplotypeScore=183.5671;InbreedingCoeff=0.6985;MQ=57.72;MQ0=4;MQRankSum=-6.443;QD=37.28;ReadPosRankSum=1.111;VQSLOD=4.3109;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:44,2:46:99:1809,127,0	0/0:11,0:11:33.10:0,33,717	0/1:12,0:9:19.64:20,0,249	0/0:10,0:10:30.01:0,30,511	0/0:16,0:16:41.68:0,42,813	0/0:15,0:15:42.13:0,42,929	0/0:36,0:36:99:0,102,1955	1/1:27,0:25:75.18:1193,75,0	0/0:29,0:29:81.27:0,81,1685	0/0:28,0:28:84.28:0,84,1801	0/0:14,0:13:33.07:0,33,603	0/0:30,0:30:90.30:0,90,1928	0/0:29,0:29:86.88:0,87,1806	0/0:26,0:26:75.23:0,75,1520	0/0:41,0:41:81.17:0,81,1266	1/1:23,1:24:63.99:1129,64,0	1/1:36,1:37:82.89:1492,83,0	0/0:26,0:26:72.20:0,72,1545	1/1:17,1:18:45.14:794,45,0	1/1:12,1:13:39.11:709,39,0	0/0:44,0:44:99:0,117,2366	1/1:18,1:19:54.16:811,54,0	0/0:24,0:24:69.22:0,69,1383	0/0:48,0:48:99:0,141,2845	0/0:14,0:14:39.13:0,39,590	0/1:20,0:20:99:508,0,115	0/1:22,0:22:53.24:526,0,53	0/1:12,0:11:4.10:368,0,4
chr10	5316698	.	TACATGA	T	10500.37	PASS	AB=0.535;AC=19;AF=0.339;AN=56;BaseQRankSum=15.795;DP=703;FS=28.537;HRun=0;HaplotypeScore=157.2618;InbreedingCoeff=0.9153;MQ=64.82;MQ0=0;MQRankSum=-16.560;QD=51.73;ReadPosRankSum=-0.368;VQSLOD=3.1373;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,29:32:48.16:1052,48,0	0/0:10,0:10:30.10:0,30,1046	0/0:28,0:28:78.13:0,78,2329	0/0:22,0:21:60.19:0,60,1715	0/0:21,0:21:63.22:0,63,2266	0/0:16,0:16:48.13:0,48,1621	0/0:30,0:29:87.28:0,87,3016	1/1:2,25:26:72.23:1668,72,0	0/0:31,0:31:90.31:0,90,3245	0/0:33,0:33:99:0,99,3443	0/0:26,0:26:73.48:0,73,2330	0/0:35,0:35:99:0,102,3538	0/0:27,0:27:81.26:0,81,2832	0/0:29,0:29:78.27:0,78,2781	0/0:49,0:49:99:0,141,4594	1/1:2,23:25:54.19:1286,54,0	1/1:2,21:23:36.12:859,36,0	0/0:17,0:17:48.16:0,48,1698	1/1:3,11:14:30.10:718,30,0	1/1:1,17:18:48.16:1140,48,0	0/0:42,0:42:99:0,123,4377	1/1:0,19:19:42.14:972,42,0	0/0:26,0:26:72.23:0,72,2351	0/0:41,0:41:99:0,114,4086	0/0:17,0:17:51.17:0,51,1803	0/1:3,20:23:46.76:1413,0,47	1/1:1,17:18:45.15:1098,45,0	1/1:0,4:4:12.04:294,12,0
chr10	5316899	.	CCACACACACACACACACACACACACA	C	2984.50	PASS	AB=0.642;AC=8;AF=0.148;AN=54;BaseQRankSum=8.227;DP=591;FS=10.434;HRun=0;HaplotypeScore=315.6936;InbreedingCoeff=0.6432;MQ=49.46;MQ0=20;MQRankSum=-6.349;QD=27.89;ReadPosRankSum=-1.855;VQSLOD=0.8113;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:28:19.15:0,19,410	0/0:8,0:8:12.04:0,12,967	./.	0/0:28,0:4:6.02:0,6,186	0/0:11,0:13:18.06:0,18,1586	0/0:11,0:12:30.10:0,30,2931	0/0:26,0:27:45.08:0,45,3450	0/0:18,0:18:9.03:0,9,359	0/0:12,0:14:27.01:0,27,2404	0/0:17,0:20:42.14:0,42,3778	0/0:8,0:8:15.05:0,15,1465	0/0:16,0:15:24.08:0,24,2204	0/0:18,0:17:33.11:0,33,3465	0/0:21,0:22:35.84:0,36,3272	1/1:17,16:33:21.71:1106,22,0	0/0:17,0:24:27.09:0,27,1306	0/0:19,0:27:11.93:0,12,232	0/0:23,0:24:48.16:0,48,4240	0/0:12,0:13:23.75:0,24,1133	0/0:10,0:15:15.05:0,15,754	0/0:46,0:48:69.69:0,70,5228	0/0:15,0:20:12.51:0,13,724	0/0:8,0:8:18.06:0,18,1563	0/0:37,0:37:81.28:0,81,7542	1/1:16,14:31:21.07:1131,21,0	0/1:10,0:23:99:286,0,235	0/1:7,0:14:10.04:275,0,10	1/1:0,0:4:12.03:337,12,0
chr10	5318040	.	GGT	G	1769.58	PASS	AB=0.912;AC=18;AF=0.333;AN=54;BaseQRankSum=0.252;DP=757;FS=5.789;HRun=0;HaplotypeScore=115.7661;InbreedingCoeff=0.1181;MQ=60.83;MQ0=16;MQRankSum=2.836;QD=4.54;ReadPosRankSum=1.210;VQSLOD=2.6040;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:35,2:38:1.91:2,0,788	0/0:14,1:15:2.05:0,2,445	0/0:51,0:24:12.51:0,13,171	0/0:37,1:20:2.96:0,3,20	0/1:15,3:18:60.04:60,0,439	0/1:20,4:23:99:122,0,308	0/1:33,2:35:64.90:65,0,546	0/0:24,0:30:40.22:0,40,387	0/1:22,4:27:35.97:36,0,764	0/0:24,1:25:2.06:0,2,462	0/1:13,3:16:0.94:1,0,425	0/0:25,1:26:17.11:0,17,689	0/0:15,0:15:33.04:0,33,446	0/1:25,1:26:7.14:7,0,746	0/0:18,0:18:2.99:0,3,24	1/1:8,15:22:45.13:510,45,0	0/0:16,0:41:50.97:0,51,441	0/1:26,1:27:24.56:25,0,392	1/1:21,4:23:13.76:155,14,0	1/1:18,9:26:41.75:416,42,0	0/1:40,4:42:99:155,0,701	1/1:10,9:18:30.09:340,30,0	0/0:17,1:18:5.01:0,5,468	0/0:33,1:34:30.97:0,31,888	./.	0/1:20,2:41:41.74:42,0,671	0/0:8,0:16:38.94:0,39,337	0/0:9,0:29:60.02:0,60,584
chr10	5318111	.	ATGTGTGTGTG	A	5404.18	PASS	AB=0.785;AC=18;AF=0.321;AN=56;BaseQRankSum=5.975;DP=722;FS=3.310;HRun=0;HaplotypeScore=232.5924;InbreedingCoeff=0.7518;MQ=55.72;MQ0=18;MQRankSum=-9.978;QD=23.00;ReadPosRankSum=0.343;VQSLOD=4.2516;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:16,20:36:20.98:452,21,0	0/0:9,0:9:18.03:0,18,536	0/0:38,0:15:11.95:0,12,95	0/0:40,0:16:11.89:0,12,125	0/0:18,0:18:30.05:0,30,1057	0/0:15,0:18:39.12:0,39,1532	0/0:37,0:40:90.24:0,90,3439	1/1:23,0:23:23.61:190,24,0	0/1:28,1:31:31.01:31,0,2101	0/0:29,0:30:72.23:0,72,2559	0/0:11,0:11:15.04:0,15,541	0/0:24,0:28:54.18:0,54,2219	0/0:17,0:16:38.92:0,39,1669	0/0:23,0:23:36.11:0,36,1640	1/1:0,0:11:27.05:267,27,0	1/1:10,15:24:19.05:758,19,0	1/1:20,6:28:29.86:617,30,0	0/0:28,0:29:72.11:0,72,2203	0/1:12,12:25:18.43:572,0,18	1/1:10,14:24:0.82:939,1,0	0/0:51,0:56:97.80:0,98,3660	1/1:3,21:23:51.17:1548,51,0	0/0:12,0:15:24.07:0,24,894	0/0:39,0:41:96.30:0,96,4136	1/1:0,0:5:3.01:30,3,0	0/0:16,0:32:27.29:0,27,869	0/0:6,0:17:42.03:0,42,620	0/0:14,0:20:30.07:0,30,471
chr10	5318277	.	CA	C	7892.56	PASS	AB=0.532;AC=19;AF=0.339;AN=56;BaseQRankSum=10.819;DP=548;FS=12.673;HRun=1;HaplotypeScore=59.5833;InbreedingCoeff=0.9113;MQ=78.27;MQ0=0;MQRankSum=-0.074;QD=37.41;ReadPosRankSum=3.658;VQSLOD=4.3449;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,22:22:57.19:791,57,0	0/0:14,0:14:42.09:0,42,606	0/0:11,0:11:23.90:0,24,316	0/0:12,0:13:9.79:0,10,252	0/0:17,0:17:51.13:0,51,755	0/0:19,0:19:54.17:0,54,840	0/0:30,0:30:90.22:0,90,1357	1/1:0,29:29:84.26:1135,84,0	0/0:23,0:23:69.18:0,69,1066	0/0:26,0:26:73.12:0,73,1113	0/0:12,0:12:33.11:0,33,519	0/0:15,0:15:45.15:0,45,717	0/0:17,0:17:48.16:0,48,760	0/0:25,0:25:75.24:0,75,1162	0/0:25,0:25:75.23:0,75,1134	1/1:0,14:14:39.13:545,39,0	1/1:0,39:39:99:1467,105,0	0/0:20,0:20:57.19:0,57,904	1/1:0,24:24:72.19:948,72,0	1/1:0,19:19:57.15:775,57,0	0/0:29,0:29:78.25:0,78,1212	1/1:0,13:13:36.12:503,36,0	0/0:10,0:10:30.10:0,30,466	0/0:18,0:18:54.12:0,54,803	0/0:13,0:13:39.13:0,39,622	0/1:3,22:25:50.26:808,0,50	1/1:0,17:17:48.16:669,48,0	1/1:0,9:9:18.06:252,18,0
chr10	5318900	.	TCCCCA	T	833.61	PASS	AB=0.964;AC=18;AF=0.333;AN=54;BaseQRankSum=1.308;DP=272;FS=4.848;HRun=0;HaplotypeScore=61.2073;InbreedingCoeff=0.5243;MQ=50.23;MQ0=50;MQRankSum=-3.870;QD=9.58;ReadPosRankSum=-0.164;VQSLOD=1.7096;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:8,4:12:17.85:156,18,0	0/0:5,0:5:3.01:0,3,40	0/0:30,0:4:6.02:0,6,119	0/0:37,0:7:3.95:0,4,110	0/0:5,0:5:9.03:0,9,246	0/0:6,0:6:9.03:0,9,251	0/0:8,0:6:6.02:0,6,140	1/1:5,4:8:12.04:227,12,0	0/0:5,0:5:5.89:0,6,144	0/0:5,0:4:9.03:0,9,247	0/0:5,0:5:6.02:0,6,158	0/0:12,0:11:13.15:0,13,279	0/0:7,0:7:11.62:0,12,335	0/0:12,0:12:15.05:0,15,420	0/0:6,0:6:12.04:0,12,256	1/1:8,1:8:5.99:61,6,0	0/1:16,0:14:8.72:66,0,9	0/0:6,0:5:6.02:0,6,148	1/1:7,2:9:9.03:157,9,0	1/1:6,0:6:2.97:20,3,0	0/0:12,0:10:6.02:0,6,174	1/1:4,0:4:3.01:57,3,0	0/0:6,0:6:6.02:0,6,157	./.	0/0:7,0:7:9:0,9,159	1/1:5,0:3:6.02:107,6,0	0/1:12,1:11:6.55:94,0,7	1/1:2,2:3:3.90:59,4,0
chr10	5318921	.	CCCCAA	C	485.60	PASS	AB=0.950;AC=15;AF=0.268;AN=56;BaseQRankSum=4.096;DP=295;FS=11.567;HRun=0;HaplotypeScore=50.8891;InbreedingCoeff=0.2510;MQ=43.94;MQ0=68;MQRankSum=-1.815;QD=3.74;ReadPosRankSum=0.443;VQSLOD=0.2072;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:10,0:9:2.50:36,2,0	0/0:1,0:1:2.97:0,3,20	0/0:52,0:5:9.01:0,9,126	0/1:59,0:5:15.53:16,0,146	0/0:8,0:7:14.40:0,14,291	0/0:10,0:10:1.26:0,1,376	0/0:9,0:6:15.04:0,15,314	1/1:4,0:4:12.04:142,12,0	0/0:3,0:3:8.99:0,9,139	0/0:8,0:7:21.05:0,21,329	0/0:7,0:7:15.01:0,15,273	0/0:10,0:10:19.20:0,19,307	0/0:9,0:9:15.23:0,15,321	0/0:11,0:10:13.09:0,13,477	0/1:6,0:6:6.05:6,0,225	0/1:6,0:4:13.90:14,0,14	1/1:5,0:5:3.93:50,4,0	0/0:10,0:10:2.03:0,2,219	0/1:7,0:6:26.69:108,0,27	0/0:3,0:3:2.94:0,3,20	0/0:8,0:7:12.49:0,12,253	1/1:3,0:3:3.01:36,3,0	0/0:3,0:3:6.02:0,6,153	0/0:8,0:5:15.01:0,15,134	0/0:4,0:5:7.57:0,8,114	0/1:5,6:8:1.66:106,0,2	0/1:11,0:10:1.93:94,0,2	0/1:3,0:3:2.93:30,0,3
chr10	5318926	.	A	AAC	717.85	PASS	AB=0.875;AC=23;AF=0.500;AN=46;BaseQRankSum=5.395;DP=366;FS=13.225;HRun=0;HaplotypeScore=82.0150;InbreedingCoeff=0.5462;MQ=43.57;MQ0=66;MQRankSum=-4.258;QD=4.82;ReadPosRankSum=-1.569;VQSLOD=0.7805;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:15:0.89:0,1,2	./.	./.	./.	0/0:8,0:7:12.03:0,12,133	0/1:15,0:15:0.92:1,0,230	0/0:9,0:7:11.81:0,12,91	1/1:11,0:11:14.51:104,15,0	1/1:6,0:6:11.80:122,12,0	0/0:11,0:10:9.01:0,9,93	0/0:9,0:9:18.01:0,18,188	0/0:10,0:10:14.83:0,15,145	0/1:4,5:10:21.33:124,0,21	0/0:13,0:12:17.98:0,18,162	1/1:10,0:9:5.73:35,6,0	./.	1/1:14,0:10:11.98:96,12,0	0/1:12,0:11:3.96:4,0,109	1/1:12,0:10:0.94:3,1,0	./.	0/0:7,0:6:8.79:0,9,68	1/1:12,0:12:0.94:2,1,0	0/0:3,0:3:2.90:0,3,33	0/0:9,0:7:20.99:0,21,203	1/1:6,0:5:3:26,3,0	1/1:12,0:9:8.15:52,8,0	1/1:23,0:21:37.63:281,38,0	1/1:6,0:5:3:26,3,0
chr10	5320150	.	T	TG	869.35	PASS	AB=0.944;AC=20;AF=0.417;AN=48;BaseQRankSum=2.042;DP=126;FS=0.000;HRun=6;HaplotypeScore=33.5455;InbreedingCoeff=0.4890;MQ=121.73;MQ0=1;MQRankSum=-2.627;QD=13.37;ReadPosRankSum=0.684;VQSLOD=1.4267;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,8:8:9.03:113,9,0	./.	0/1:13,0:8:13.23:44,0,13	0/0:19,1:21:4.40:0,4,150	0/0:3,0:3:3.01:0,3,31	0/0:2,0:2:6.01:0,6,61	0/1:7,0:8:6.82:7,0,124	1/1:2,2:4:6.02:74,6,0	0/0:3,0:3:6.01:0,6,61	0/0:2,0:2:3.01:0,3,31	0/0:4,0:4:6.01:0,6,56	./.	0/0:3,0:3:9.01:0,9,87	0/0:2,0:2:3.01:0,3,31	./.	1/1:2,4:6:12.02:136,12,0	1/1:1,6:7:12.04:150,12,0	0/0:1,0:1:3.01:0,3,30	1/1:1,1:2:3:29,3,0	1/1:0,2:2:5.95:56,6,0	0/0:7,0:7:12.01:0,12,116	1/1:0,2:2:3.01:38,3,0	0/0:1,0:1:3.01:0,3,31	0/0:8,0:8:21.01:0,21,195	0/0:3,0:3:6:0,6,52	1/1:0,4:4:12.04:151,12,0	1/1:2,6:8:21.02:234,21,0	./.
chr10	5320337	.	A	AG	2718.42	PASS	AC=20;AF=0.370;AN=54;BaseQRankSum=-7.475;DP=292;FS=16.324;HRun=5;HaplotypeScore=40.6780;InbreedingCoeff=0.8990;MQ=105.56;MQ0=0;MQRankSum=-2.101;QD=28.92;ReadPosRankSum=1.883;VQSLOD=1.9091;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,20:21:45.15:591,45,0	0/0:1,0:1:3.01:0,3,32	0/0:27,0:26:60.53:0,61,619	0/0:21,0:20:47.09:0,47,460	./.	0/0:8,0:8:21.05:0,21,225	0/0:14,0:14:42.11:0,42,451	1/1:3,9:12:24.08:315,24,0	0/0:10,0:10:30.06:0,30,314	0/0:6,0:6:15.03:0,15,154	0/0:4,0:4:9.02:0,9,95	0/0:14,0:14:42.11:0,42,450	0/0:6,0:6:15.02:0,15,153	0/0:9,0:9:27.07:0,27,289	0/0:11,0:11:30.06:0,30,312	1/1:0,10:10:24.08:316,24,0	1/1:0,10:10:24.08:316,24,0	0/0:8,0:8:24.06:0,24,258	1/1:2,10:12:33.02:368,33,0	1/1:0,1:1:3.01:39,3,0	0/0:33,0:33:87.18:0,87,933	1/1:0,6:6:18.06:233,18,0	0/0:1,0:1:3.01:0,3,32	0/0:19,0:19:54.13:0,54,580	0/0:5,0:5:15.04:0,15,159	1/1:0,8:8:21.07:276,21,0	1/1:1,7:8:18.06:237,18,0	1/1:0,5:6:18.06:235,18,0
chr10	5321340	.	ATG	A	7162.16	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=11.512;DP=476;FS=3.675;HRun=0;HaplotypeScore=57.5048;InbreedingCoeff=0.9597;MQ=75.90;MQ0=3;MQRankSum=0.775;QD=40.01;ReadPosRankSum=0.302;VQSLOD=6.5170;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,39:38:99:1457,99,0	0/0:3,0:3:9.03:0,9,168	0/0:18,0:17:42.14:0,42,765	0/0:8,0:9:23.84:0,24,449	0/0:10,0:10:27.09:0,27,492	0/0:15,0:15:45.13:0,45,808	0/0:25,0:25:69.19:0,69,1179	1/1:0,23:23:69.22:995,69,0	0/0:17,1:18:10.01:0,10,910	0/0:23,0:23:69.23:0,69,1257	0/0:16,0:15:39.07:0,39,685	0/0:16,0:16:45.15:0,45,841	0/0:20,0:20:60.19:0,60,1092	0/0:14,0:14:42.14:0,42,786	0/0:26,0:26:78.22:0,78,1424	1/1:0,18:18:51.17:751,51,0	1/1:0,27:27:78.26:1148,78,0	0/0:18,0:18:54.19:0,54,1011	1/1:0,20:20:60.18:860,60,0	1/1:0,5:5:15.05:220,15,0	0/0:16,0:16:48.16:0,48,898	1/1:1,4:5:15.05:221,15,0	0/0:13,0:13:39.10:0,39,665	0/0:19,0:19:54.18:0,54,1011	0/0:18,0:18:48.16:0,48,880	1/1:2,23:25:12.97:893,13,0	1/1:0,13:12:36.12:530,36,0	1/1:0,3:3:6.02:88,6,0
chr10	5322477	.	A	ACAACAC	6122.83	PASS	AB=0.643;AC=17;AF=0.304;AN=56;BaseQRankSum=1.969;DP=575;FS=9.097;HRun=0;HaplotypeScore=99.9189;InbreedingCoeff=0.5672;MQ=57.15;MQ0=22;MQRankSum=-8.236;QD=24.99;ReadPosRankSum=0.803;VQSLOD=3.8598;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:11,0:41:79.51:407,0,80	0/0:12,0:11:33.11:0,33,762	0/0:55,0:10:19.92:0,20,196	0/1:50,0:11:20.81:21,0,107	0/0:22,0:22:52.06:0,52,1112	0/0:17,0:17:39.07:0,39,786	0/0:14,0:15:39.09:0,39,712	1/1:15,0:19:38.78:560,39,0	0/0:21,0:21:60.18:0,60,1313	0/0:16,0:16:45.15:0,45,913	0/0:9,0:9:21.07:0,21,501	0/0:16,0:17:42.10:0,42,836	0/0:17,0:16:47.99:0,48,890	0/0:11,0:11:30.10:0,30,583	0/0:16,0:16:32.26:0,32,275	1/1:0,0:14:24.08:566,24,0	1/1:1,21:26:18.06:671,18,0	0/0:24,0:24:71.93:0,72,1349	0/1:4,1:19:50.94:601,0,51	1/1:1,0:12:26.93:499,27,0	0/0:34,0:35:95.28:0,95,1738	1/1:0,0:2:6.02:148,6,0	0/0:11,0:11:33.10:0,33,642	0/0:15,0:15:42.10:0,42,839	0/0:15,0:15:31.55:0,32,193	0/1:5,10:19:41.83:852,0,42	1/1:2,12:20:27.09:851,27,0	0/1:1,14:18:8.38:947,0,8
chr10	5323670	.	CA	C	8546.27	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=18.283;DP=654;FS=6.234;HRun=2;HaplotypeScore=83.0173;InbreedingCoeff=0.9997;MQ=84.67;MQ0=0;MQRankSum=-2.558;QD=35.17;ReadPosRankSum=-0.803;VQSLOD=4.7458;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,38:41:99:1383,108,0	0/0:8,0:8:24.08:0,24,360	0/0:22,0:22:45.56:0,46,822	0/0:21,0:21:46.90:0,47,774	0/0:30,0:30:84.75:0,85,1249	0/0:14,0:14:42.13:0,42,610	0/0:27,0:27:78.24:0,78,1146	1/1:2,27:29:81.26:1050,81,0	0/0:22,0:22:66.22:0,66,986	0/0:22,0:22:66.22:0,66,989	0/0:15,0:15:45.15:0,45,663	0/0:26,0:26:78.24:0,78,1130	0/0:22,0:22:66.21:0,66,961	0/0:24,0:24:69.23:0,69,1033	0/0:30,0:30:87.28:0,87,1279	1/1:0,20:20:54.18:701,54,0	1/1:0,22:22:63.20:818,63,0	0/0:22,0:22:66.21:0,66,963	1/1:1,15:16:45.09:550,45,0	1/1:1,19:20:48.16:623,48,0	0/0:34,0:33:99:0,99,1463	1/1:1,24:25:72.23:935,72,0	0/0:20,0:20:60.20:0,60,899	0/0:32,0:32:90.30:0,90,1330	0/0:20,0:20:60.20:0,60,890	1/1:1,28:29:42.30:1045,42,0	1/1:0,23:23:60.20:779,60,0	1/1:0,18:18:51.17:662,51,0
chr10	5326650	.	CCA	C	601.60	PASS	AB=0.928;AC=20;AF=0.370;AN=54;BaseQRankSum=5.478;DP=549;FS=1.407;HRun=0;HaplotypeScore=91.9892;InbreedingCoeff=0.2104;MQ=65.45;MQ0=8;MQRankSum=0.047;QD=2.25;ReadPosRankSum=2.069;VQSLOD=1.9631;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:25:35.33:0,35,382	1/1:8,0:8:3.01:33,3,0	0/0:25,0:15:3.01:0,3,37	0/0:30,0:17:3.01:0,3,37	0/1:12,0:12:17.39:17,0,165	0/1:21,4:24:0.11:0,0,295	0/0:25,4:28:0.15:0,0,394	0/0:24,0:24:20.91:0,21,189	0/1:21,2:23:2.85:3,0,318	0/0:13,0:13:15.05:0,15,207	0/0:8,0:8:5.98:0,6,56	0/1:19,1:20:7.08:7,0,215	0/1:11,0:11:21.47:21,0,154	0/0:21,0:20:9.88:0,10,223	0/0:14,0:15:5.99:0,6,48	1/1:8,6:17:27.21:259,27,0	1/1:14,0:26:17.04:84,17,0	0/1:19,5:25:99:108,0,260	1/1:11,0:9:5.97:53,6,0	1/1:5,4:9:2.68:32,3,0	0/1:38,6:44:32.31:32,0,607	1/1:15,2:25:11.04:96,11,0	0/1:10,0:10:17.90:18,0,105	0/0:24,4:28:12.14:0,12,522	0/0:16,0:19:8.99:0,9,76	0/0:20,0:23:36.82:0,37,273	0/0:5,0:17:8:0,8,52	./.
chr10	5327404	.	TG	T	9420.93	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=14.898;DP=669;FS=7.105;HRun=3;HaplotypeScore=67.0943;InbreedingCoeff=0.9992;MQ=74.05;MQ0=0;MQRankSum=-1.527;QD=35.15;ReadPosRankSum=0.295;VQSLOD=5.2686;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,42:42:99:1451,117,0	0/0:10,0:10:30.10:0,30,432	0/0:13,0:13:36.05:0,36,451	0/0:9,0:9:21.04:0,21,256	0/0:24,0:24:69.21:0,69,972	0/0:22,0:22:63.20:0,63,890	0/0:34,0:34:99:0,102,1469	1/1:0,32:32:93.28:1140,93,0	0/0:23,0:23:66.21:0,66,932	0/0:22,0:22:66.22:0,66,951	0/0:15,0:15:45.12:0,45,609	0/0:29,0:29:87.28:0,87,1235	0/0:16,0:16:48.13:0,48,652	0/0:27,0:27:75.24:0,75,1062	0/0:26,0:26:78.26:0,78,1122	1/1:2,20:22:60.19:744,60,0	1/1:0,44:44:99:1562,126,0	0/0:28,0:28:84.26:0,84,1187	1/1:0,23:23:69.20:842,69,0	1/1:0,25:25:69.22:855,69,0	0/0:39,0:39:99:0,114,1642	1/1:0,27:27:69.22:855,69,0	0/0:23,0:23:60.19:0,60,844	0/0:28,0:28:78.26:0,78,1119	0/0:13,0:13:36.05:0,36,458	1/1:0,12:12:36.11:446,36,0	1/1:0,29:29:87.27:1078,87,0	1/1:0,12:12:36.11:446,36,0
chr10	5327560	.	T	TGG	1352.07	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-4.553;DP=619;FS=16.865;HRun=4;HaplotypeScore=89.2972;InbreedingCoeff=0.9885;MQ=86.56;MQ0=0;MQRankSum=-1.695;QD=42.25;ReadPosRankSum=-3.576;VQSLOD=1.5550;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:93.25:0,93,1189	0/0:9,0:9:24.08:0,24,320	0/0:24,0:25:59.39:0,59,704	0/0:21,0:21:43.12:0,43,564	0/0:24,0:24:66.21:0,66,868	0/0:19,0:19:54.15:0,54,689	0/0:34,0:34:99:0,99,1304	1/1:4,28:32:84.27:1447,84,0	0/0:19,0:19:45.14:0,45,598	0/0:24,0:24:60.20:0,60,796	0/0:17,0:17:39.12:0,39,519	0/0:32,0:32:81.25:0,81,1064	0/0:13,0:13:33.08:0,33,410	0/0:12,0:12:36.12:0,36,480	0/0:24,0:24:57.18:0,57,759	0/0:18,0:18:54.18:0,54,712	0/0:31,0:31:87.26:0,87,1136	0/0:15,0:15:39.09:0,39,490	0/0:16,0:16:42.14:0,42,560	0/0:21,0:21:54.16:0,54,705	0/0:42,0:42:99:0,120,1534	0/0:22,0:22:51.14:0,51,662	0/0:16,0:16:45.15:0,45,596	0/0:26,0:26:75.25:0,75,999	0/0:10,0:10:27.06:0,27,330	0/0:28,0:28:74.79:0,75,905	0/0:24,0:24:72.18:0,72,910	0/0:7,0:7:18.06:0,18,240
chr10	5327879	.	CT	C	1247.07	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.221;DP=476;FS=0.645;HRun=1;HaplotypeScore=51.5155;InbreedingCoeff=0.9687;MQ=75.76;MQ0=0;MQRankSum=-2.308;QD=29.69;ReadPosRankSum=0.025;VQSLOD=3.2134;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:69.03:0,69,956	0/0:4,0:4:12.04:0,12,192	0/0:13,0:13:26.99:0,27,524	0/0:17,0:17:24.74:0,25,666	0/0:13,0:13:39.13:0,39,620	0/0:27,0:27:81.23:0,81,1210	0/0:20,0:20:57.15:0,57,859	0/0:31,0:31:93.27:0,93,1409	0/0:13,0:13:36.12:0,36,571	0/0:23,0:23:69.24:0,69,1102	0/0:15,0:15:45.14:0,45,692	0/0:7,0:7:21.07:0,21,335	0/0:14,0:14:42.14:0,42,669	0/0:7,0:7:18.06:0,18,272	1/1:0,27:25:57.18:795,57,0	0/0:12,0:12:36.10:0,36,529	0/0:22,0:22:63.13:0,63,925	0/0:24,0:24:69.20:0,69,1054	0/0:22,0:22:63.16:0,63,937	0/0:17,0:17:42.13:0,42,646	0/0:20,0:20:57.19:0,57,907	0/0:14,0:14:39.12:0,39,598	0/0:10,0:10:30.10:0,30,477	0/0:20,0:20:54.17:0,54,839	1/1:3,12:15:45.10:573,45,0	0/0:17,0:17:51.15:0,51,772	0/0:20,0:19:54.17:0,54,833	0/0:5,0:5:15.05:0,15,240
chr10	5327984	.	TTTTC	T	3027.34	PASS	AB=1.000;AC=25;AF=0.446;AN=56;BaseQRankSum=3.372;DP=463;FS=0.499;HRun=0;HaplotypeScore=76.4568;InbreedingCoeff=0.8924;MQ=70.88;MQ0=6;MQRankSum=-0.704;QD=12.61;ReadPosRankSum=-2.022;VQSLOD=2.3466;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:26:64.10:543,64,0	0/0:4,0:4:9.01:0,9,131	0/1:20,0:9:3.92:4,0,60	0/0:18,0:12:10.45:0,10,98	0/0:16,0:16:39.07:0,39,596	0/0:12,0:12:33.01:0,33,542	0/0:11,0:11:22.61:0,23,396	1/1:36,0:36:50.91:501,51,0	0/0:14,0:13:33.10:0,33,577	0/0:14,0:13:30.06:0,30,387	0/0:12,0:12:27.03:0,27,460	0/0:15,0:15:35.27:0,35,495	0/0:17,0:17:45.12:0,45,705	0/0:10,0:10:20.98:0,21,353	1/1:8,0:8:15.02:154,15,0	1/1:14,0:14:27.03:249,27,0	1/1:3,14:17:6.02:103,6,0	0/0:19,0:18:35.83:0,36,436	1/1:11,0:11:15:164,15,0	1/1:20,0:18:29.83:276,30,0	0/0:6,0:6:9.01:0,9,158	1/1:14,0:14:29.83:294,30,0	0/0:21,0:21:48.04:0,48,686	0/0:34,0:34:66:0,66,1050	1/1:19,0:18:9.03:134,9,0	1/1:22,0:21:47.39:412,47,0	1/1:5,18:23:11.60:142,12,0	1/1:9,1:10:21.04:272,21,0
chr10	5327992	.	CTTTCTTT	C	2186.02	PASS	AB=0.949;AC=17;AF=0.304;AN=56;BaseQRankSum=5.032;DP=477;FS=4.601;HRun=0;HaplotypeScore=105.8067;InbreedingCoeff=0.6873;MQ=69.60;MQ0=7;MQRankSum=0.668;QD=12.35;ReadPosRankSum=-0.962;VQSLOD=2.3253;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:31,0:31:6.83:7,0,546	0/0:5,0:5:14.98:0,15,271	0/0:24,0:9:17.12:0,17,246	0/0:18,0:12:17.05:0,17,167	0/0:20,0:20:51.05:0,51,1191	0/0:16,0:16:47.18:0,47,1140	0/0:12,0:12:31.22:0,31,747	1/1:6,21:29:49.31:672,49,0	0/0:15,0:14:33.10:0,33,985	0/0:13,0:12:33.08:0,33,661	0/0:18,0:18:42.04:0,42,919	0/0:15,0:15:38.89:0,39,853	0/0:18,0:18:48.14:0,48,1295	0/0:10,0:10:27.01:0,27,652	1/1:11,0:10:6.38:75,6,0	1/1:14,0:14:29.06:254,29,0	0/0:18,0:18:5.67:0,6,98	0/0:18,0:17:44.88:0,45,778	1/1:7,1:9:17.82:238,18,0	1/1:2,18:19:38.49:433,38,0	0/0:4,0:4:12.03:0,12,292	1/1:1,11:12:32.84:439,33,0	0/0:21,0:21:51.51:0,52,1166	0/0:31,0:31:71.19:0,71,1806	1/1:1,1:16:7.36:135,7,0	0/1:21,0:20:72.90:73,0,155	0/0:22,0:24:7:0,7,68	0/1:9,0:11:48.31:54,0,48
chr10	5329510	.	TGTGAA	T	2417.72	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=7.664;DP=568;FS=6.759;HRun=0;HaplotypeScore=116.1444;InbreedingCoeff=0.9874;MQ=91.18;MQ0=0;MQRankSum=-8.247;QD=44.77;ReadPosRankSum=-2.101;VQSLOD=3.0949;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,114,3588	0/0:7,0:7:18.06:0,18,501	0/0:28,0:28:78.20:0,78,2061	0/0:23,0:23:51.25:0,51,1461	0/0:13,0:13:39.13:0,39,1169	0/0:20,0:20:60.21:0,60,1870	0/0:31,0:31:93.32:0,93,2989	0/0:22,0:22:63.20:0,63,1597	0/0:26,0:26:75.24:0,75,2186	0/0:25,0:25:75.26:0,75,2315	0/0:6,0:6:15.05:0,15,477	0/0:21,0:21:63.22:0,63,1938	0/0:14,0:14:39.13:0,39,1259	0/0:21,0:21:57.20:0,57,1793	0/0:29,0:28:87.30:0,87,2693	1/1:0,22:22:54.19:1202,54,0	0/0:24,0:24:72.19:0,72,1961	0/0:17,0:17:51.17:0,51,1512	1/1:1,9:10:27.09:524,27,0	1/1:1,11:12:24.08:409,24,0	0/0:36,0:36:99:0,105,3212	1/1:0,10:10:24.08:442,24,0	0/0:10,0:10:30.10:0,30,969	0/0:36,0:36:99:0,105,3325	0/0:20,0:20:57.20:0,57,1839	0/0:18,0:18:54.19:0,54,1646	0/0:24,0:24:72.25:0,72,2271	0/0:5,0:5:15.05:0,15,446
chr10	5333135	.	GGT	G	471.92	PASS	AB=0.908;AC=10;AF=0.179;AN=56;BaseQRankSum=3.754;DP=752;FS=10.683;HRun=0;HaplotypeScore=149.6001;InbreedingCoeff=0.1976;MQ=54.18;MQ0=13;MQRankSum=1.419;QD=2.34;ReadPosRankSum=0.964;VQSLOD=2.2217;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:16,16:32:29.40:334,29,0	0/0:12,0:12:15.03:0,15,211	0/0:50,0:24:14.92:0,15,167	0/0:47,0:21:11.98:0,12,99	0/0:17,0:17:39.08:0,39,562	0/0:18,0:18:30.10:0,30,464	0/1:25,4:29:50.85:51,0,583	0/0:25,0:24:20.81:0,21,146	0/0:26,0:24:14.50:0,15,511	0/0:40,0:40:72.04:0,72,909	0/0:13,0:13:21.06:0,21,305	0/0:26,1:27:13.15:0,13,617	0/1:22,3:23:59.96:60,0,466	0/1:20,3:22:45.78:46,0,254	0/0:24,0:26:8.98:0,9,77	0/0:13,0:13:9.01:0,9,99	0/0:22,0:31:4.08:0,4,87	0/0:31,0:31:54.01:0,54,722	0/0:20,0:19:11.93:0,12,108	0/0:17,0:17:0.89:0,1,2	0/0:83,3:86:53.09:0,53,1713	0/1:19,0:19:0.76:1,0,33	0/1:16,3:19:77.99:78,0,158	0/1:24,2:26:24.99:25,0,565	1/1:16,0:28:4.90:20,5,0	0/0:32,0:35:45.76:0,46,355	0/0:7,0:12:8.97:0,9,73	0/0:4,0:4:4.41:0,4,15
chr10	5333160	.	G	GTGTGTGTA	2671.58	PASS	AB=0.941;AC=12;AF=0.214;AN=56;BaseQRankSum=3.469;DP=681;FS=1.976;HRun=0;HaplotypeScore=234.5728;InbreedingCoeff=0.1694;MQ=48.60;MQ0=10;MQRankSum=-7.056;QD=14.52;ReadPosRankSum=-3.905;VQSLOD=2.0037;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:41.22:0,41,692	0/0:8,0:8:23.96:0,24,439	0/0:44,0:16:36.93:0,37,408	0/0:42,0:19:38.74:0,39,328	0/0:17,0:17:42.06:0,42,1027	0/0:16,0:16:35.99:0,36,816	0/0:24,0:24:54.06:0,54,1218	0/0:20,0:19:46.79:0,47,352	0/0:24,0:23:45.31:0,45,997	0/0:38,0:38:91.47:0,91,1364	0/0:9,0:9:21.03:0,21,484	0/0:21,0:21:56.90:0,57,1117	0/0:22,0:21:48.07:0,48,1008	0/0:25,0:24:35.72:0,36,699	1/1:22,0:22:6.51:245,7,0	0/1:15,2:17:72.63:370,0,73	0/1:26,0:26:79.37:479,0,79	0/0:30,0:31:22.59:0,23,1297	0/1:13,0:13:31.52:179,0,32	0/1:6,4:14:0:1,0,0	0/0:78,0:78:99:0,165,3616	1/1:10,8:22:6:181,6,0	0/0:20,0:20:35.89:0,36,529	0/0:32,0:32:57.87:0,58,1323	0/1:23,0:22:13.06:181,0,13	0/1:29,0:29:99:817,0,117	0/1:10,0:10:31.24:212,0,31	0/1:8,0:8:33.95:157,0,34
chr10	5333161	.	TATCCATGTGTGGACCCCCTCACTG	T	512.27	PASS	AB=0.959;AC=7;AF=0.125;AN=56;BaseQRankSum=3.673;DP=638;FS=7.204;HRun=0;HaplotypeScore=359.1644;InbreedingCoeff=-0.1386;MQ=49.19;MQ0=9;MQRankSum=-3.822;QD=4.88;ReadPosRankSum=-3.413;VQSLOD=0.6265;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:57.73:0,58,3261	0/0:8,0:8:24.08:0,24,1518	0/0:43,0:16:39.18:0,39,1364	0/0:40,0:18:48.16:0,48,1718	0/0:18,0:18:45.15:0,45,3660	0/0:16,0:16:35.98:0,36,2640	0/0:24,0:24:59.73:0,60,3418	0/0:21,0:20:57.20:0,57,2748	0/0:25,0:24:52.94:0,53,3273	0/0:35,0:35:96.30:0,96,5285	0/0:7,0:7:21.06:0,21,1194	0/0:21,0:21:57.18:0,57,3833	0/0:22,0:21:56.83:0,57,3087	0/0:26,0:25:50.83:0,51,2954	0/0:20,0:20:18.08:0,18,312	0/0:14,0:14:39.13:0,39,1552	0/1:19,0:19:47.65:48,0,1136	0/0:29,0:29:16.11:0,16,6434	0/1:13,0:13:3.98:4,0,1252	0/0:11,0:11:8.84:0,9,204	0/0:76,0:76:99:0,165,14040	0/1:13,0:13:52.81:53,0,142	0/0:18,0:18:42.13:0,42,2797	0/0:32,0:32:65.92:0,66,5141	0/1:20,0:19:99:110,0,831	0/1:15,10:25:99:270,0,1795	0/1:7,0:7:11.63:12,0,590	0/1:8,0:8:99:141,0,481
chr10	5333185	.	GGT	G	425.56	PASS	AB=0.890;AC=20;AF=0.357;AN=56;BaseQRankSum=7.525;DP=673;FS=11.163;HRun=0;HaplotypeScore=159.8648;InbreedingCoeff=0.3052;MQ=48.78;MQ0=17;MQRankSum=-4.522;QD=1.57;ReadPosRankSum=-0.487;VQSLOD=1.7025;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:21,5:26:18.45:187,18,0	0/0:6,0:6:6.02:0,6,88	0/0:42,0:17:3.01:0,3,45	0/0:44,0:25:8.99:0,9,90	0/0:14,0:15:3.92:0,4,189	0/0:19,0:19:14.85:0,15,192	0/0:22,0:23:1.09:0,1,169	1/1:22,0:30:8.52:42,9,0	0/1:24,1:24:13.53:14,0,174	0/0:33,3:36:2.30:0,2,253	0/0:2,0:2:3.01:0,3,46	0/0:15,0:15:14.69:0,15,207	0/1:19,1:20:3.96:4,0,349	0/1:24,1:23:15.45:15,0,201	1/1:10,0:15:2.84:14,3,0	1/1:4,0:11:22.63:109,23,0	0/1:13,1:21:20.29:53,0,20	0/0:30,0:30:43.20:0,43,516	0/1:11,0:15:6.29:30,0,6	1/1:11,0:12:4.56:17,5,0	0/0:85,14:98:4.29:0,4,805	1/1:10,0:13:2.81:14,3,0	0/0:20,0:20:17.60:0,18,258	0/1:26,1:27:12.48:12,0,252	1/1:19,0:25:17.40:85,17,0	0/0:33,0:34:42.21:0,42,381	0/0:8,0:10:5.97:0,6,47	0/0:1,0:6:12:0,12,104
chr10	5333288	.	TGGATGGGA	T	2558.68	PASS	AB=0.864;AC=32;AF=0.615;AN=52;BaseQRankSum=-2.617;DP=272;FS=2.358;HRun=0;HaplotypeScore=127.0855;InbreedingCoeff=0.2666;MQ=62.15;MQ0=3;MQRankSum=-1.734;QD=14.62;ReadPosRankSum=-0.552;VQSLOD=2.8387;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:9,1:10:0.19:0,0,0	0/0:3,2:5:3.01:0,3,48	0/0:28,0:11:8.87:0,9,92	0/0:24,0:11:8.03:0,8,103	1/1:6,2:8:3.06:22,3,0	0/1:10,1:11:36.17:90,0,36	0/1:16,0:15:99:104,0,114	1/1:1,6:5:15.05:266,15,0	0/1:4,7:11:17.12:102,0,17	1/1:6,2:8:18.62:308,19,0	1/1:6,2:8:0.77:2,1,0	0/0:13,2:15:6.42:0,6,73	0/1:5,1:6:5.74:112,0,6	1/1:11,1:11:2.41:10,2,0	0/1:6,1:7:0:0,0,0	./.	1/1:3,0:3:3.01:65,3,0	1/1:8,0:8:5.53:112,6,0	./.	0/1:3,2:5:0:0,0,0	0/1:11,0:11:0:0,0,0	0/0:5,1:6:0.83:0,1,3	1/1:5,0:5:1.23:3,1,0	0/1:14,1:15:0.21:1,0,0	1/1:6,3:9:2.90:16,3,0	1/1:2,13:15:42.14:1059,42,0	1/1:1,6:7:6.02:175,6,0	1/1:0,3:3:9.03:244,9,0
chr10	5333289	.	GGA	G	1286.74	PASS	AB=0.763;AC=35;AF=0.795;AN=44;BaseQRankSum=-0.254;DP=246;FS=0.000;HRun=0;HaplotypeScore=117.0570;InbreedingCoeff=0.3001;MQ=64.45;MQ0=3;MQRankSum=-2.321;QD=6.47;ReadPosRankSum=0.224;VQSLOD=3.2242;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,4:9:0.47:1,0,0	0/0:5,0:5:2.22:0,2,7	0/1:25,1:9:3.09:3,0,79	0/1:21,3:10:12.58:13,0,61	1/1:5,3:8:0.08:1,0,0	1/1:8,3:11:5.59:79,6,0	0/1:7,5:12:3.57:67,0,4	1/1:6,1:5:15:154,15,0	1/1:8,3:11:5.61:51,6,0	1/1:3,5:8:24.02:282,24,0	1/1:3,4:7:0.99:2,1,0	0/0:12,3:15:5.09:0,5,19	1/1:3,1:4:9.50:118,9,0	1/1:6,6:11:2.04:7,2,0	./.	./.	1/1:0,0:3:2.96:19,3,0	1/1:3,4:7:5.97:80,6,0	./.	./.	./.	1/1:3,3:6:0.47:1,0,0	0/1:2,3:5:0.13:0,0,0	0/1:5,7:12:0.10:0,0,0	./.	1/1:13,1:14:41.73:396,42,0	1/1:6,0:6:5.88:36,6,0	1/1:3,0:3:8.89:85,9,0
chr10	5333292	.	TGG	T	601.02	PASS	AB=0.933;AC=32;AF=0.696;AN=46;BaseQRankSum=1.143;DP=237;FS=4.966;HRun=3;HaplotypeScore=117.8147;InbreedingCoeff=0.2065;MQ=60.95;MQ0=3;MQRankSum=-0.887;QD=3.18;ReadPosRankSum=-1.088;VQSLOD=-0.6730;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:9,0:9:0.21:0,0,0	0/0:4,0:4:3:0,3,26	0/1:21,0:7:28.60:36,0,29	0/1:24,1:9:1.66:2,0,65	0/0:8,0:8:0.05:0,0,1	0/1:10,0:10:12.92:13,0,13	0/1:11,0:11:6.72:7,0,51	1/1:6,0:5:7.55:39,8,0	1/1:11,0:11:5.94:41,6,0	1/1:8,0:8:21.96:144,22,0	1/1:7,0:7:0.99:2,1,0	0/0:15,0:15:6:0,6,53	1/1:4,0:4:9.33:65,9,0	1/1:11,1:11:1.91:7,2,0	0/1:6,0:6:0:0,0,0	./.	1/1:3,0:3:2.84:14,3,0	0/1:5,2:7:9.07:36,0,9	./.	./.	./.	1/1:6,0:6:0.34:0,0,0	0/1:4,1:5:0.27:0,0,0	0/1:11,1:12:0.20:0,0,0	./.	1/1:14,0:14:37.70:227,38,0	1/1:6,0:6:5.68:28,6,0	1/1:3,0:3:8.68:56,9,0
chr10	5333357	.	GT	G	10247.55	PASS	AC=50;AF=0.962;AN=52;BaseQRankSum=1.668;DP=313;FS=3.821;HRun=2;HaplotypeScore=295.7934;InbreedingCoeff=0.6447;MQ=40.48;MQ0=0;MQRankSum=-1.732;QD=33.49;ReadPosRankSum=1.643;VQSLOD=3.7864;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,15:15:39.08:485,39,0	1/1:0,8:8:24.04:291,24,0	0/0:3,0:3:3.01:0,3,32	./.	1/1:1,16:17:26.60:347,27,0	1/1:0,10:10:27.09:349,27,0	1/1:1,12:13:33.10:415,33,0	1/1:0,15:15:45.15:583,45,0	1/1:1,20:21:54.13:678,54,0	1/1:1,27:28:84.27:1075,84,0	1/1:0,13:13:24.84:311,25,0	1/1:0,10:10:24.08:310,24,0	1/1:0,5:5:15.05:193,15,0	1/1:1,23:24:66.21:847,66,0	1/1:0,11:11:30.10:387,30,0	1/1:0,5:5:15.05:194,15,0	1/1:0,9:9:27.09:348,27,0	1/1:0,6:6:18.02:214,18,0	1/1:0,8:8:21.03:252,21,0	1/1:0,12:12:30.04:368,30,0	./.	1/1:0,12:12:33.11:426,33,0	1/1:0,15:15:42.14:540,42,0	1/1:0,4:4:9.03:116,9,0	1/1:0,13:13:33.11:426,33,0	1/1:0,23:23:63.16:796,63,0	1/1:1,5:6:15.04:180,15,0	1/1:0,3:3:9.03:116,9,0
chr10	5333363	.	GT	G	11938.22	PASS	AC=52;AF=0.963;AN=54;BaseQRankSum=2.239;DP=332;FS=7.260;HRun=1;HaplotypeScore=321.7916;InbreedingCoeff=0.6438;MQ=34.76;MQ0=0;MQRankSum=-2.441;QD=36.18;ReadPosRankSum=2.062;VQSLOD=3.0020;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,19:19:45.15:620,45,0	1/1:0,9:9:27.09:376,27,0	0/0:2,0:2:5.98:0,6,54	./.	1/1:0,17:17:26.61:373,27,0	1/1:0,11:11:33.11:454,33,0	1/1:0,13:13:36.12:493,36,0	1/1:0,18:18:54.18:754,54,0	1/1:0,20:20:57.19:787,57,0	1/1:0,29:29:87.24:1178,87,0	1/1:0,13:13:27.43:376,27,0	1/1:0,11:11:30.10:417,30,0	1/1:0,7:7:21.07:287,21,0	1/1:0,24:24:66.22:910,66,0	1/1:0,11:11:30.10:417,30,0	1/1:0,5:5:15.05:209,15,0	1/1:0,10:10:27.09:375,27,0	1/1:0,6:6:15.05:209,15,0	1/1:0,8:8:21.07:293,21,0	1/1:0,15:15:30.09:417,30,0	1/1:0,3:3:3.01:33,3,0	1/1:0,15:15:36.12:500,36,0	1/1:0,15:15:42.14:582,42,0	1/1:0,5:5:12.04:167,12,0	1/1:0,13:13:33.11:459,33,0	1/1:0,24:24:66.22:919,66,0	1/1:0,6:6:15.05:208,15,0	1/1:0,3:3:9.03:126,9,0
chr10	5333386	.	CTT	C	6927.44	PASS	AB=0.599;AC=48;AF=0.889;AN=54;BaseQRankSum=6.907;DP=311;FS=17.474;HRun=3;HaplotypeScore=325.9372;InbreedingCoeff=0.1071;MQ=37.87;MQ0=0;MQRankSum=-0.172;QD=22.49;ReadPosRankSum=8.099;VQSLOD=1.2461;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:2,21:23:6.04:403,0,6	1/1:1,7:8:9.29:187,9,0	0/0:1,0:2:2.84:0,3,14	./.	1/1:0,15:15:39.03:357,39,0	1/1:1,11:12:19.08:305,19,0	1/1:0,9:9:24.03:226,24,0	0/1:3,9:12:16.82:201,0,17	1/1:0,13:13:39.04:366,39,0	1/1:1,26:27:61.15:718,61,0	1/1:1,12:13:13.58:210,14,0	1/1:1,14:15:24.72:353,25,0	0/1:5,5:10:55.82:110,0,56	1/1:1,18:19:23.73:445,24,0	1/1:0,11:11:30.04:284,30,0	1/1:0,7:7:21.03:201,21,0	1/1:0,8:8:24.04:233,24,0	1/1:0,7:7:21.04:210,21,0	0/1:3,4:7:14.62:72,0,15	1/1:1,16:17:46.30:424,46,0	1/1:0,3:3:3:28,3,0	1/1:0,14:14:36.02:331,36,0	1/1:2,16:18:25.08:346,25,0	1/1:0,4:4:9.01:84,9,0	1/1:1,13:14:31.12:252,31,0	1/1:0,14:14:36.06:351,36,0	1/1:0,5:5:15.02:143,15,0	1/1:0,3:3:9.02:89,9,0
chr10	5333389	.	CT	C	4479.38	PASS	AB=0.625;AC=51;AF=0.944;AN=54;BaseQRankSum=7.040;DP=312;FS=13.555;HRun=2;HaplotypeScore=331.0074;InbreedingCoeff=-0.0761;MQ=40.45;MQ0=0;MQRankSum=0.339;QD=14.40;ReadPosRankSum=7.815;VQSLOD=1.9233;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,21:23:6.84:259,7,0	1/1:1,7:8:6.08:118,6,0	1/1:3,0:3:2.88:15,3,0	./.	1/1:0,15:15:38.21:235,38,0	1/1:1,11:12:18.26:195,18,0	1/1:0,9:9:23.54:146,24,0	0/1:3,9:12:19.98:122,0,20	1/1:0,13:13:38.29:241,38,0	1/1:1,26:27:58.36:465,58,0	1/1:1,12:13:8.51:127,9,0	1/1:1,14:15:23.45:227,23,0	0/1:5,5:10:56.90:63,0,57	1/1:1,18:19:22.50:279,23,0	1/1:0,11:11:29.45:185,29,0	1/1:0,7:7:20.66:132,21,0	1/1:0,8:8:23.65:155,24,0	1/1:0,7:7:20.77:141,21,0	0/1:3,4:7:23.49:42,0,23	1/1:1,16:17:43.37:278,43,0	1/1:0,3:3:2.94:18,3,0	1/1:0,14:14:35.23:218,35,0	1/1:2,16:18:24.78:224,25,0	1/1:0,4:4:8.84:55,9,0	1/1:1,13:14:25.37:156,25,0	1/1:0,14:14:35.44:229,35,0	1/1:0,5:5:14.72:92,15,0	1/1:0,3:3:8.90:60,9,0
chr10	5333678	.	GTCTCTCTCTCTGTCTCTCTCTCTCTCTCTCTCTCTC	G	799.67	PASS	AB=0.625;AC=3;AF=0.060;AN=50;BaseQRankSum=4.119;DP=534;FS=3.686;HRun=0;HaplotypeScore=324.5753;InbreedingCoeff=0.5064;MQ=61.37;MQ0=33;MQRankSum=-1.572;QD=38.08;ReadPosRankSum=0.372;VQSLOD=1.6381;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:28:69.71:0,70,7974	0/0:5,0:4:6.02:0,6,877	0/0:35,0:20:46.94:0,47,1314	0/0:55,0:23:48.54:0,49,1554	0/0:14,0:10:15.05:0,15,1464	0/0:20,0:19:34.82:0,35,4130	0/0:19,0:17:36.12:0,36,3969	0/0:21,0:20:57.20:0,57,3562	0/0:16,0:16:42.13:0,42,3658	0/0:18,0:16:48.16:0,48,5320	0/0:12,0:11:27.09:0,27,3447	0/0:13,0:13:35.48:0,35,4232	0/0:17,0:16:45.14:0,45,5430	0/0:18,0:14:36.12:0,36,3904	0/1:4,0:10:18.98:133,0,19	0/0:7,8:14:3.01:0,3,56	./.	0/0:16,0:14:27.09:0,27,3895	1/1:6,5:9:14.97:766,15,0	./.	0/0:33,0:26:60.21:0,60,6606	./.	0/0:17,0:13:25.44:0,25,3254	0/0:37,0:36:87.30:0,87,10892	0/0:4,0:9:0.14:0,0,1	0/0:14,0:13:36.08:0,36,2557	0/0:14,0:13:33.11:0,33,2603	0/0:4,0:3:9.03:0,9,638
chr10	5333684	.	CTCTCTG	C	1204.69	PASS	AB=1.000;AC=13;AF=0.260;AN=50;BaseQRankSum=5.092;DP=511;FS=18.243;HRun=0;HaplotypeScore=100.1905;InbreedingCoeff=0.7126;MQ=56.71;MQ0=41;MQRankSum=-3.507;QD=10.85;ReadPosRankSum=-4.170;VQSLOD=-0.2952;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:29:25.26:0,25,1140	0/0:5,0:4:6.02:0,6,137	0/0:27,0:12:8.31:0,8,84	0/1:47,0:16:28.34:28,0,134	0/0:15,0:11:9.03:0,9,198	0/0:19,0:18:29.99:0,30,735	0/0:18,0:16:29.92:0,30,740	1/1:22,0:21:16.36:328,16,0	0/0:17,0:17:34.64:0,35,608	0/0:20,0:18:41.99:0,42,945	0/0:12,0:10:23.44:0,23,609	0/0:13,0:13:14.06:0,14,554	0/0:17,0:15:42.01:0,42,953	0/0:20,0:16:21.47:0,21,543	1/1:6,0:6:0.89:2,1,0	./.	0/0:33,0:27:2.90:0,3,16	0/0:16,0:15:28.81:0,29,697	1/1:7,0:5:6.02:84,6,0	./.	0/0:37,0:29:48.07:0,48,1125	./.	0/0:17,0:13:24.04:0,24,562	0/0:39,0:37:68.12:0,68,1820	0/0:8,0:6:0:0,0,0	1/1:3,10:12:29.02:442,29,0	1/1:12,0:11:24.02:373,24,0	1/1:4,0:3:8.92:107,9,0
chr10	5333688	.	CTG	C	938.09	PASS	AB=1.000;AC=16;AF=0.320;AN=50;BaseQRankSum=7.660;DP=507;FS=39.907;HRun=0;HaplotypeScore=80.4345;InbreedingCoeff=0.6148;MQ=54.07;MQ0=44;MQRankSum=-3.554;QD=5.30;ReadPosRankSum=-4.436;VQSLOD=-0.4097;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:38,0:32:18.51:19,0,543	0/0:5,0:4:5.89:0,6,63	0/0:21,0:7:7.84:0,8,84	0/1:41,0:13:24.47:24,0,112	0/0:15,0:11:6.08:0,6,61	0/0:19,0:18:30.05:0,30,404	0/0:19,0:17:29.51:0,30,371	1/1:18,4:21:47.53:470,48,0	0/0:17,0:16:25.25:0,25,310	0/0:20,0:18:15.46:0,15,441	0/0:12,0:10:22.17:0,22,271	0/0:13,0:13:3.66:0,4,219	0/0:19,0:17:38.98:0,39,481	0/0:20,0:16:17.03:0,17,273	1/1:7,0:7:0.47:1,0,0	./.	1/1:34,0:28:2.94:18,3,0	0/0:19,0:17:26.23:0,26,319	1/1:7,0:5:5.68:28,6,0	./.	0/0:36,0:28:48.05:0,48,616	./.	0/0:16,0:12:23.99:0,24,272	0/0:38,0:36:64.99:0,65,956	0/0:9,0:6:0:0,0,0	1/1:11,1:11:28.96:236,29,0	1/1:12,0:11:26.05:235,26,0	1/1:4,0:3:8.92:70,9,0
chr10	5334347	.	TA	T	4190.78	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=13.396;DP=677;FS=3.564;HRun=7;HaplotypeScore=63.5323;InbreedingCoeff=0.9995;MQ=81.74;MQ0=0;MQRankSum=-3.255;QD=25.25;ReadPosRankSum=1.154;VQSLOD=4.3967;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,99,1244	0/0:13,0:13:39.10:0,39,467	0/0:21,0:20:32.27:0,32,407	0/0:19,0:19:41.25:0,41,491	0/0:27,0:27:78.22:0,78,945	0/0:19,0:19:57.18:0,57,717	0/0:27,0:27:81.24:0,81,994	0/0:37,0:37:96.30:0,96,1197	0/0:20,0:20:48.08:0,48,560	0/0:29,0:29:84.27:0,84,1053	0/0:22,0:22:66.20:0,66,819	0/0:17,0:17:45.14:0,45,566	0/0:16,0:16:45.13:0,45,542	0/0:23,0:23:66.20:0,66,818	1/1:2,26:28:75.17:765,75,0	1/1:6,23:29:66.14:673,66,0	0/0:34,0:34:96.27:0,96,1179	0/0:25,0:25:69.20:0,69,854	1/1:6,23:29:69.14:697,69,0	1/1:4,27:31:81.11:813,81,0	0/0:11,0:11:27.07:0,27,327	1/1:3,20:23:57.08:570,57,0	0/0:24,0:24:66.19:0,66,807	0/0:20,0:20:57.18:0,57,717	1/1:2,24:26:66.15:673,66,0	0/0:32,0:32:96.30:0,96,1197	0/0:30,0:29:84.22:0,84,1014	0/0:9,0:9:27.09:0,27,340
chr10	5334503	.	G	GA	873.08	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-8.291;DP=662;FS=0.000;HRun=4;HaplotypeScore=88.0255;InbreedingCoeff=0.9860;MQ=81.83;MQ0=0;MQRankSum=-1.518;QD=33.58;ReadPosRankSum=-3.997;VQSLOD=2.0535;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,135,1517	0/0:7,0:7:21.06:0,21,238	0/0:23,0:23:56.13:0,56,560	0/0:11,0:11:23.85:0,24,207	0/0:33,0:33:90.24:0,90,1011	0/0:20,0:20:57.16:0,57,646	0/0:22,0:22:66.14:0,66,719	1/1:2,24:26:72.23:968,72,0	0/0:21,0:21:63.16:0,63,703	0/0:33,0:33:93.24:0,93,1037	0/0:26,0:26:66.15:0,66,723	0/0:22,0:22:51.09:0,51,555	0/0:25,0:25:72.20:0,72,815	0/0:15,0:15:42.12:0,42,476	0/0:31,0:31:75.17:0,75,836	0/0:32,0:32:87.22:0,87,968	0/0:32,0:32:90.24:0,90,1011	0/0:24,0:24:72.21:0,72,817	0/0:22,0:21:62.54:0,63,689	0/0:29,0:29:78.18:0,78,868	0/0:16,0:16:45.11:0,45,501	0/0:20,0:20:57.16:0,57,646	0/0:22,0:22:60.17:0,60,680	0/0:23,0:22:63.17:0,63,705	0/0:21,0:21:57.16:0,57,646	0/0:28,0:28:84.24:0,84,952	0/0:26,0:26:69.19:0,69,782	0/0:6,0:6:18.05:0,18,204
chr10	5334519	.	C	CTA	8782.48	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-14.552;DP=716;FS=8.641;HRun=0;HaplotypeScore=82.9384;InbreedingCoeff=0.9758;MQ=78.74;MQ0=0;MQRankSum=0.123;QD=53.23;ReadPosRankSum=2.709;VQSLOD=4.7927;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,163,2605	0/0:7,0:7:21.07:0,21,342	0/0:21,0:21:56.20:0,56,891	0/0:9,0:10:5.81:0,6,295	0/0:37,0:37:99:0,108,1734	0/0:24,0:24:63.21:0,63,1028	0/0:24,0:24:69.24:0,69,1126	0/0:30,0:30:87.29:0,87,1397	0/0:18,0:18:51.17:0,51,832	0/0:34,0:34:99:0,99,1588	0/0:31,0:31:90.31:0,90,1460	0/0:23,0:23:60.19:0,60,956	0/0:23,0:23:69.24:0,69,1123	0/0:18,0:18:54.17:0,54,856	1/1:2,35:37:93.32:1882,93,0	1/1:1,30:32:84.29:1707,84,0	0/0:36,0:36:99:0,105,1650	0/0:26,0:26:78.27:0,78,1267	1/1:1,21:21:63.22:1240,63,0	1/1:1,29:31:78.23:1545,78,0	0/0:24,0:24:72.23:0,72,1141	1/1:0,21:21:63.21:1251,63,0	0/0:22,0:22:66.21:0,66,1053	0/0:24,0:23:69.19:0,69,1088	1/1:0,22:22:57.20:1157,57,0	0/0:29,0:29:87.30:0,87,1420	0/0:27,0:27:81.28:0,81,1316	0/0:8,0:8:18.04:0,18,269
chr10	5336037	.	T	TACAC	2692.87	PASS	AB=0.680;AC=23;AF=0.411;AN=56;BaseQRankSum=1.225;DP=647;FS=14.629;HRun=0;HaplotypeScore=132.9091;InbreedingCoeff=0.8211;MQ=61.13;MQ0=8;MQRankSum=-4.410;QD=13.14;ReadPosRankSum=-1.549;VQSLOD=2.1809;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:24:23.98:432,24,0	0/0:15,0:15:33.10:0,33,515	0/0:43,0:22:5.09:0,5,361	0/0:46,0:22:9.02:0,9,117	0/0:33,0:33:60.15:0,60,901	0/0:21,0:21:51.17:0,51,831	0/0:35,0:38:62.61:0,63,901	1/1:25,0:25:11.91:270,12,0	0/0:13,0:13:36.05:0,36,530	0/0:33,0:33:54.17:0,54,840	0/0:22,0:22:54.17:0,54,843	0/0:28,0:30:50.60:0,51,856	0/0:15,0:16:17.50:0,17,425	0/0:26,0:28:23.44:0,23,524	1/1:12,0:17:5.53:112,6,0	1/1:11,0:11:9.03:128,9,0	1/1:9,1:14:12.04:229,12,0	0/0:16,0:18:1.49:0,1,309	1/1:6,0:6:6.01:68,6,0	1/1:12,0:19:5.74:104,6,0	0/0:23,0:28:68.68:0,69,979	0/1:9,0:17:0:0,0,0	0/0:18,0:18:39.13:0,39,618	0/0:35,0:37:81.27:0,81,1301	1/1:11,0:16:5.81:105,6,0	1/1:9,12:23:39.09:789,39,0	1/1:6,16:25:21.07:510,21,0	1/1:2,6:8:6.02:146,6,0
chr10	5336060	.	A	ACACACACT	2819.03	PASS	AB=1.000;AC=14;AF=0.250;AN=56;BaseQRankSum=3.553;DP=732;FS=18.089;HRun=0;HaplotypeScore=191.9256;InbreedingCoeff=0.0835;MQ=62.78;MQ0=16;MQRankSum=-1.098;QD=10.60;ReadPosRankSum=-2.896;VQSLOD=1.1053;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:3,17:29:24.08:951,24,0	0/0:12,0:12:33.10:0,33,899	0/0:91,0:36:22.43:0,22,828	0/1:77,0:30:12.28:12,0,455	0/0:29,0:29:69.08:0,69,1590	0/0:24,0:24:72.12:0,72,1564	0/0:33,0:33:90.09:0,90,1740	1/1:6,0:29:84.05:1179,84,0	0/0:19,0:19:48.03:0,48,932	0/0:25,0:25:72.06:0,72,1592	0/0:24,0:24:66.14:0,66,1575	0/0:30,0:30:52.85:0,53,1642	0/0:17,0:17:45.06:0,45,895	0/0:24,0:24:57.07:0,57,1142	0/1:17,0:17:0.11:0,0,40	0/1:6,0:6:54.78:58,0,55	0/1:18,0:18:99:100,0,117	0/0:20,0:20:24:0,24,745	0/1:5,0:5:49.01:49,0,63	0/1:19,0:19:34.04:192,0,34	0/0:42,0:42:99:0,117,2193	0/0:14,0:14:11.86:0,12,88	0/0:20,0:20:50.83:0,51,1122	0/0:42,0:42:99:0,112,2536	0/1:11,0:11:68.83:69,0,109	0/1:27,0:27:99:249,0,143	0/1:19,0:19:10.85:108,0,11	0/1:8,0:8:15.55:16,0,32
chr10	5336159	.	GCA	G	452.33	PASS	AB=0.937;AC=19;AF=0.413;AN=46;BaseQRankSum=0.726;DP=542;FS=3.748;HRun=0;HaplotypeScore=101.4169;InbreedingCoeff=0.0163;MQ=57.78;MQ0=14;MQRankSum=0.452;QD=1.59;ReadPosRankSum=0.202;VQSLOD=2.0194;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:6,0:6:9.03:0,9,130	./.	./.	0/1:14,0:14:4.47:4,0,124	0/1:13,5:17:7.76:8,0,22	1/1:25,1:26:17.70:164,18,0	0/0:28,0:27:1.55:0,2,4	0/1:17,0:17:26.89:27,0,115	0/0:16,0:16:4.18:0,4,53	0/0:17,0:18:2.19:0,2,281	0/1:22,1:25:99:126,0,104	0/1:13,0:13:59.25:59,0,124	0/1:18,0:18:35.65:36,0,115	0/1:13,0:13:0:0,0,0	0/1:14,0:15:6.07:6,0,10	0/0:20,0:19:0:0,0,0	0/1:16,1:17:17.17:17,0,102	1/1:12,0:10:5.68:28,6,0	1/1:12,0:13:2.74:12,3,0	0/0:47,8:49:9.54:0,10,389	./.	1/1:12,0:12:11.88:87,12,0	0/1:37,6:43:14.28:14,0,179	0/1:23,0:24:0:0,0,0	0/0:19,0:20:30.60:0,31,211	0/0:12,0:13:13.75:0,14,102	./.
chr10	5336203	.	ACACT	A	164.91	PASS	AB=0.985;AC=10;AF=0.185;AN=54;BaseQRankSum=5.373;DP=615;FS=28.139;HRun=0;HaplotypeScore=130.2233;InbreedingCoeff=0.2758;MQ=51.47;MQ0=11;MQRankSum=-4.067;QD=1.24;ReadPosRankSum=-0.700;VQSLOD=0.3526;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:19.56:0,20,285	0/0:7,0:7:15.49:0,15,268	0/0:23,0:13:16.76:0,17,293	0/0:24,0:17:44.08:0,44,467	0/0:21,0:20:29.09:0,29,403	0/0:21,0:20:12:0,12,261	0/0:20,0:20:50.64:0,51,402	0/1:18,0:18:13.74:14,0,132	0/1:16,0:16:99:100,0,321	0/0:30,0:30:63.62:0,64,621	0/0:26,0:26:22.06:0,22,728	0/0:31,0:31:13.84:0,14,637	0/0:20,0:19:7.22:0,7,444	0/0:25,0:24:55.05:0,55,542	0/1:7,0:6:0.13:0,0,0	1/1:8,4:12:5.72:72,6,0	0/0:27,0:24:4.40:0,4,59	0/0:20,0:20:13.52:0,14,457	0/1:12,0:10:31.99:32,0,92	1/1:17,2:18:2.61:56,3,0	0/0:63,0:60:80.79:0,81,1162	./.	0/0:19,0:18:23.96:0,24,321	0/1:29,0:29:17.71:18,0,413	0/1:18,2:19:0:0,0,0	0/0:28,0:28:9.51:0,10,296	0/0:22,0:21:13.20:0,13,173	0/0:9,0:9:2.30:0,2,4
chr10	5336205	.	ACT	A	135.02	PASS	AB=0.988;AC=16;AF=0.286;AN=56;BaseQRankSum=6.805;DP=618;FS=32.335;HRun=0;HaplotypeScore=113.4648;InbreedingCoeff=0.1056;MQ=52.79;MQ0=12;MQRankSum=-3.174;QD=0.57;ReadPosRankSum=-1.451;VQSLOD=0.5255;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:19.56:0,20,285	0/0:7,0:7:15.49:0,15,222	0/0:26,0:15:33.01:0,33,343	0/0:25,0:18:45.64:0,46,471	0/1:21,0:20:0.74:1,0,282	0/0:21,1:21:41.93:0,42,299	0/0:20,0:20:9.55:0,10,237	0/1:18,0:18:12.21:12,0,133	0/1:15,0:15:69.50:69,0,249	0/0:28,0:28:68.93:0,69,585	0/0:26,0:26:5.45:0,5,536	0/0:32,0:32:24.58:0,25,537	0/1:20,0:19:38:38,0,348	0/0:26,0:25:45.56:0,46,415	0/1:6,1:6:0.11:0,0,0	1/1:12,0:12:2.80:23,3,0	0/0:28,0:25:2.26:0,2,57	0/0:19,0:19:10.01:0,10,319	0/1:12,0:10:4.76:5,0,94	1/1:19,0:18:2.58:24,3,0	0/0:62,0:59:57.43:0,57,851	1/1:19,0:18:2.98:22,3,0	0/1:18,0:17:9.16:9,0,205	0/1:28,0:28:22.72:23,0,336	0/1:20,0:19:0:0,0,0	0/1:28,0:28:46.24:46,0,156	0/0:22,0:21:7.08:0,7,91	0/0:0,10:10:2.30:0,2,4
chr10	5336210	.	C	CAG	1420.28	PASS	AB=0.700;AC=16;AF=0.308;AN=52;BaseQRankSum=5.585;DP=668;FS=23.161;HRun=0;HaplotypeScore=135.4025;InbreedingCoeff=0.7774;MQ=53.02;MQ0=10;MQRankSum=-3.700;QD=7.21;ReadPosRankSum=-4.264;VQSLOD=0.6073;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:48.10:0,48,552	0/0:8,0:8:17.87:0,18,206	0/0:29,0:18:43.95:0,44,550	0/0:27,1:20:50.37:0,50,618	0/0:23,0:22:42.11:0,42,492	0/0:22,0:21:42.13:0,42,505	0/0:19,0:19:44.33:0,44,509	0/1:10,10:21:82.93:342,0,83	0/0:18,0:18:32.96:0,33,342	0/0:25,0:26:54.02:0,54,626	0/0:31,0:31:63.02:0,63,723	0/0:31,0:31:81.06:0,81,945	0/0:20,0:20:44.70:0,45,491	0/0:23,0:23:54.10:0,54,625	./.	1/1:18,0:18:13.52:83,14,0	1/1:7,19:24:4.22:51,4,0	0/0:19,0:19:44.96:0,45,514	1/1:16,0:18:32.49:249,32,0	1/1:26,0:25:13.61:109,14,0	0/0:57,0:54:86.57:0,87,970	1/1:24,0:23:6:51,6,0	0/0:18,0:18:42.12:0,42,497	0/0:27,0:27:47.85:0,48,504	./.	0/1:17,9:26:4.26:392,0,4	1/1:7,16:22:9.74:112,10,0	1/1:13,0:13:15.02:212,15,0
chr10	5337404	.	A	AGT	956.27	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-5.189;DP=879;FS=0.000;HRun=0;HaplotypeScore=118.0347;InbreedingCoeff=0.9987;MQ=76.54;MQ0=1;MQRankSum=-1.438;QD=28.98;ReadPosRankSum=-4.286;VQSLOD=3.8983;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:90.27:0,90,1095	0/0:13,0:13:33.10:0,33,406	0/0:59,0:52:89.41:0,89,1034	0/0:35,0:34:56.27:0,56,669	0/0:18,0:18:45.14:0,45,554	0/0:21,0:21:57.18:0,57,701	0/0:30,0:31:62.78:0,63,784	1/1:11,22:33:66.21:1051,66,0	0/0:39,0:39:87.35:0,87,1225	0/0:31,0:33:83.91:0,84,959	0/0:20,0:20:45.10:0,45,537	0/0:28,0:28:75.24:0,75,923	0/0:34,0:34:84.25:0,84,1020	0/0:34,0:34:84.26:0,84,1034	0/0:36,0:36:92.01:0,92,1130	0/0:36,0:36:96.30:0,96,1180	0/0:40,0:41:92.17:0,92,1225	0/0:19,0:21:50.80:0,51,567	0/0:24,0:25:60.01:0,60,705	0/0:23,0:23:63.19:0,63,763	0/0:45,0:45:99:0,108,1329	0/0:35,0:35:93.29:0,93,1144	0/0:37,0:37:93.29:0,93,1144	0/0:42,0:42:99:0,111,1366	0/0:20,0:20:54.17:0,54,665	0/0:42,0:42:92.56:0,93,1115	0/0:28,0:28:62.01:0,62,719	0/0:9,0:9:27.08:0,27,332
chr10	5337863	.	GCA	G	2720.36	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=12.328;DP=1123;FS=10.506;HRun=0;HaplotypeScore=194.9023;InbreedingCoeff=0.9968;MQ=57.03;MQ0=11;MQRankSum=0.191;QD=16.79;ReadPosRankSum=1.886;VQSLOD=3.0884;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:58:99:0,153,2519	0/0:16,0:16:42.14:0,42,710	0/0:54,0:25:57.24:0,57,613	0/0:54,0:24:39.95:0,40,559	0/0:26,0:26:63.19:0,63,1006	0/0:31,0:31:68.04:0,68,1091	0/0:38,0:38:97.21:0,97,1621	0/0:41,0:41:96.29:0,96,771	0/0:49,0:49:99:0,121,2025	0/0:50,0:50:99:0,117,1922	0/0:15,0:15:30.10:0,30,501	0/0:43,0:43:99:0,108,1754	0/0:31,0:31:78.22:0,78,1279	0/0:47,0:47:99:0,135,2282	1/1:16,31:47:90.29:1140,90,0	0/0:33,0:33:67.42:0,67,431	0/0:34,0:34:70.03:0,70,465	0/0:31,0:31:64.37:0,64,1332	0/0:27,0:26:59.98:0,60,614	0/0:16,0:16:15.96:0,16,108	0/0:123,0:123:99:0,328,5332	0/0:45,0:44:68.48:0,68,551	0/0:27,0:27:60.17:0,60,962	0/0:70,0:70:99:0,193,3194	1/1:12,13:25:41.86:527,42,0	1/1:38,0:38:36.55:503,37,0	1/1:31,0:29:46.97:437,47,0	1/1:21,0:21:42.33:290,42,0
chr10	5337871	.	ACACT	A	2311.90	PASS	AB=0.931;AC=7;AF=0.125;AN=56;BaseQRankSum=9.075;DP=1145;FS=23.271;HRun=0;HaplotypeScore=248.3683;InbreedingCoeff=0.4995;MQ=56.56;MQ0=12;MQRankSum=-1.085;QD=14.45;ReadPosRankSum=-3.487;VQSLOD=1.5226;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:60,0:60:99:0,153,3783	0/0:16,0:16:42.04:0,42,1099	0/0:64,0:29:3.23:0,3,694	0/0:63,0:26:20.61:0,21,771	0/0:25,0:25:63.06:0,63,1343	0/0:27,0:27:67:0,67,1508	0/0:40,0:40:99:0,108,2508	0/0:45,0:45:35.25:0,35,600	0/0:44,0:44:99:0,109,3114	0/0:45,0:44:99:0,126,2853	0/0:13,0:13:20.20:0,20,709	0/0:46,0:46:99:0,117,2605	0/0:32,0:32:93.17:0,93,2042	0/0:51,0:51:99:0,150,3637	1/1:48,0:48:88.73:1213,89,0	0/0:34,0:34:71.27:0,71,520	0/0:34,0:34:75.13:0,75,580	0/0:33,0:33:41.38:0,41,1927	0/0:27,0:26:23.81:0,24,440	0/0:17,0:17:13.70:0,14,138	0/0:128,0:128:99:0,349,7808	0/0:44,0:43:77.35:0,77,617	0/0:24,0:24:57.18:0,57,1443	0/0:71,0:71:99:0,199,4917	1/1:21,1:22:41.76:628,42,0	0/1:35,2:37:97.46:158,0,97	0/1:28,4:30:8.28:309,0,8	0/1:20,1:21:40.25:146,0,40
chr10	5337873	.	ACT	A	4866.73	PASS	AB=0.998;AC=18;AF=0.321;AN=56;BaseQRankSum=20.536;DP=1134;FS=17.970;HRun=0;HaplotypeScore=196.6171;InbreedingCoeff=0.5045;MQ=55.74;MQ0=12;MQRankSum=-1.585;QD=11.53;ReadPosRankSum=1.761;VQSLOD=2.9376;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:59,1:60:99:0,153,2673	0/0:15,0:15:42.03:0,42,775	0/1:65,0:28:50.75:51,0,400	0/0:67,0:27:6.45:0,6,561	0/0:24,0:24:63.06:0,63,996	0/0:26,0:26:69.96:0,70,1119	0/0:39,0:39:99:0,108,1849	0/1:44,0:44:44.99:235,0,45	0/0:44,0:44:99:0,109,2252	0/0:44,0:43:99:0,129,2034	0/0:13,0:13:20.21:0,20,511	0/0:44,0:44:99:0,117,1859	0/0:34,0:34:99:0,99,1541	0/0:52,0:52:99:0,150,2589	1/1:48,0:48:85.96:438,86,0	0/1:33,0:33:6.74:197,0,7	0/1:33,0:34:33.25:256,0,33	0/0:34,0:34:35.15:0,35,1406	0/1:27,0:26:99:130,0,162	1/1:17,0:17:10.41:111,10,0	0/0:125,0:125:99:0,352,5706	0/1:41,0:40:99:179,0,101	0/0:20,0:20:56.97:0,57,1007	0/0:69,0:69:99:0,199,3544	1/1:22,0:22:40.20:210,40,0	1/1:4,33:37:47.20:1327,47,0	1/1:13,20:32:84.03:1066,84,0	1/1:7,13:20:56.06:667,56,0
chr10	5337875	.	TCA	T	7003.56	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=18.044;DP=1138;FS=8.655;HRun=0;HaplotypeScore=192.5160;InbreedingCoeff=0.9357;MQ=56.28;MQ0=13;MQRankSum=1.253;QD=19.08;ReadPosRankSum=1.477;VQSLOD=4.4086;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:59,0:59:99:0,141,2295	0/0:15,0:15:39.13:0,39,648	0/0:68,0:29:46.40:0,46,514	0/0:66,0:27:50.67:0,51,617	0/0:23,0:23:48.14:0,48,767	0/0:26,0:26:57.18:0,57,915	0/0:37,0:38:99:0,102,1657	1/1:6,39:45:99:1249,102,0	0/0:44,0:44:99:0,120,1950	0/0:44,0:43:99:0,108,1746	0/1:13,0:13:7.56:8,0,418	0/0:44,0:44:99:0,102,1622	0/0:36,0:36:96.29:0,96,1504	0/0:54,0:54:99:0,147,2361	1/1:12,35:47:66.20:804,66,0	1/1:3,29:32:63.20:792,63,0	1/1:6,27:33:49.78:876,50,0	0/0:34,0:34:57.98:0,58,1191	1/1:12,14:25:51.09:604,51,0	1/1:8,11:19:27.04:326,27,0	0/0:129,0:129:99:0,310,4923	1/1:7,32:39:57.18:719,57,0	0/0:20,0:20:54.16:0,54,854	0/0:70,0:70:99:0,190,3092	1/1:9,13:22:35.83:426,36,0	1/1:38,0:38:17.70:450,18,0	1/1:32,0:30:69.48:464,69,0	1/1:20,0:20:41.91:287,42,0
chr10	5337931	.	ACT	A	481.16	PASS	AB=0.865;AC=10;AF=0.179;AN=56;BaseQRankSum=9.486;DP=979;FS=0.000;HRun=0;HaplotypeScore=206.6580;InbreedingCoeff=0.0387;MQ=55.66;MQ0=6;MQRankSum=-6.429;QD=2.70;ReadPosRankSum=-1.384;VQSLOD=2.4226;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,105,1740	0/0:7,0:7:18.06:0,18,319	0/0:68,1:38:83.31:0,83,1235	0/0:52,0:32:53.37:0,53,903	0/0:19,0:19:47.72:0,48,746	0/0:31,0:31:81.21:0,81,1335	0/0:32,0:32:87.28:0,87,1505	0/1:22,0:22:3.57:4,0,436	0/0:34,0:34:90.24:0,90,1447	0/0:41,0:41:99:0,117,1917	0/0:14,0:14:39.12:0,39,656	0/0:45,0:45:99:0,117,1925	0/0:48,0:48:99:0,135,2335	0/0:57,0:57:99:0,162,2740	0/0:30,13:44:17.64:0,18,150	0/1:26,9:35:60.81:109,0,61	0/1:13,5:18:99:121,0,157	0/0:18,0:18:42.10:0,42,683	0/1:18,0:18:52.10:78,0,52	0/0:28,0:28:5.94:0,6,46	0/0:136,0:136:99:0,370,6082	0/1:12,4:16:0.02:0,0,0	0/0:16,0:16:48.15:0,48,817	0/0:67,0:67:99:0,189,3110	1/1:3,11:14:2.83:25,3,0	0/1:20,5:25:99:99,0,428	0/1:15,5:20:99:154,0,301	0/1:9,1:10:24.57:25,0,155
chr10	5337971	.	ACT	A	1352.68	PASS	AB=0.933;AC=7;AF=0.125;AN=56;BaseQRankSum=8.886;DP=975;FS=10.673;HRun=0;HaplotypeScore=179.3793;InbreedingCoeff=0.9429;MQ=60.94;MQ0=6;MQRankSum=-2.243;QD=14.09;ReadPosRankSum=-0.540;VQSLOD=2.8923;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,123,2108	0/0:12,0:12:36.12:0,36,639	0/0:46,0:33:73.75:0,74,1104	0/0:54,0:38:39.21:0,39,889	0/0:18,0:18:54.18:0,54,966	0/0:31,0:31:87.26:0,87,1494	0/0:44,0:44:99:0,114,1994	0/0:40,0:40:99:0,114,1906	0/0:48,0:48:99:0,135,2258	0/0:43,0:44:91.21:0,91,2006	0/0:10,0:10:30.10:0,30,539	0/0:50,0:50:99:0,141,2376	0/0:46,0:46:99:0,126,2114	0/0:47,0:47:99:0,132,2120	0/0:39,0:39:61.99:0,62,984	1/1:11,29:39:56.24:813,56,0	0/0:26,0:26:62.81:0,63,928	0/0:17,0:17:48.14:0,48,817	1/1:14,0:14:26.68:348,27,0	0/1:26,2:26:0:0,0,0	0/0:102,0:102:99:0,279,4521	1/1:3,11:14:23.39:333,23,0	0/0:27,0:27:81.25:0,81,1388	0/0:59,0:58:99:0,157,2662	0/0:23,0:23:32.01:0,32,589	0/0:23,0:23:50.93:0,51,1077	0/0:17,0:17:42.13:0,42,699	0/0:10,0:10:24.06:0,24,384
chr10	5338201	.	TCACACACACACACACACACACA	T	212.68	PASS	AC=4;AF=0.083;AN=48;BaseQRankSum=3.376;DP=746;FS=2.552;HRun=0;HaplotypeScore=348.9286;InbreedingCoeff=0.6408;MQ=53.68;MQ0=42;MQRankSum=-1.149;QD=4.09;ReadPosRankSum=-1.642;VQSLOD=1.6720;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:33:28.10:0,28,1264	0/0:13,0:13:9.03:0,9,672	./.	./.	0/0:13,0:13:12.04:0,12,1047	0/0:14,0:14:21.07:0,21,1513	0/0:28,0:26:33.11:0,33,2181	0/0:33,0:32:33.08:0,33,620	0/0:27,0:29:36.12:0,36,2106	0/0:33,0:32:37.30:0,37,2675	0/0:10,0:10:6.02:0,6,581	0/0:35,0:33:45.15:0,45,3499	0/0:15,0:15:27.09:0,27,2151	0/0:30,0:29:35.79:0,36,2882	0/0:32,0:38:50.56:0,51,2359	1/1:19,13:31:4.25:176,4,0	0/0:28,0:25:2.37:0,2,8	0/0:26,0:27:39.13:0,39,2401	./.	./.	0/0:49,0:44:46.85:0,47,2684	1/1:15,5:19:3.01:131,3,0	0/0:17,0:16:18.04:0,18,788	0/0:44,0:41:77.88:0,78,6091	0/0:15,0:15:15.05:0,15,750	0/0:27,0:25:18.95:0,19,996	0/0:13,0:18:31.63:0,32,1362	0/0:8,0:8:12.04:0,12,655
chr10	5338202	.	C	CTG	5842.12	PASS	AB=0.779;AC=20;AF=0.370;AN=54;BaseQRankSum=-4.827;DP=754;FS=4.489;HRun=0;HaplotypeScore=123.7585;InbreedingCoeff=0.8769;MQ=53.17;MQ0=44;MQRankSum=1.618;QD=21.56;ReadPosRankSum=-0.793;VQSLOD=4.6874;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:34,0:32:1.12:1,0,22	0/0:12,0:12:15.05:0,15,229	0/0:52,0:17:50.96:0,51,735	0/0:52,0:22:58.43:0,58,848	0/0:13,0:13:30.09:0,30,421	0/0:14,0:14:39.04:0,39,529	0/0:29,0:27:72.21:0,72,1036	1/1:6,27:33:67.49:1036,67,0	0/0:28,0:28:74.50:0,75,950	0/0:34,0:33:88.97:0,89,1306	0/0:10,0:10:24.08:0,24,365	0/0:36,0:33:74.88:0,75,961	0/0:15,0:15:42.09:0,42,570	0/0:31,0:30:63.13:0,63,845	1/1:39,0:38:39.32:1051,39,0	1/1:32,0:31:36.56:563,37,0	0/1:6,23:26:10.69:63,0,11	0/0:31,0:27:59.89:0,60,781	1/1:2,11:14:39.01:553,39,0	./.	0/0:51,0:46:86.83:0,87,1180	1/1:20,0:19:30.10:493,30,0	0/0:17,0:16:35.32:0,35,468	0/0:44,0:41:98.08:0,98,1400	1/1:15,0:15:38.80:612,39,0	1/1:4,23:26:40.77:809,41,0	1/1:17,0:17:29.52:406,30,0	1/1:9,0:8:17.73:255,18,0
chr10	5339596	.	CCCCTCCCTCTG	C	1722.85	PASS	AB=0.849;AC=10;AF=0.179;AN=56;BaseQRankSum=6.847;DP=553;FS=30.866;HRun=0;HaplotypeScore=167.1074;InbreedingCoeff=-0.0406;MQ=52.91;MQ0=28;MQRankSum=-5.270;QD=10.44;ReadPosRankSum=-0.389;VQSLOD=0.6123;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:24.61:0,25,2052	0/0:1,0:1:3.01:0,3,170	0/0:23,0:2:6.01:0,6,75	0/0:18,0:4:5.78:0,6,36	0/0:16,0:16:48.16:0,48,2393	0/0:13,0:12:36.12:0,36,1703	0/0:29,0:29:81.20:0,81,3514	0/1:8,9:13:99:221,0,108	0/0:17,0:17:48.15:0,48,1873	0/0:26,0:25:66.23:0,66,2827	0/0:9,0:9:27.08:0,27,1390	0/0:18,0:18:54.15:0,54,2126	0/0:17,0:17:48.12:0,48,1926	0/0:22,0:22:60.17:0,60,2514	0/0:29,0:28:84.20:0,84,2265	0/1:24,0:24:29.07:29,0,1416	0/1:18,17:35:99:553,0,1275	0/0:26,0:25:4:0,4,2883	0/1:18,2:12:99:139,0,637	0/0:14,0:14:21.27:0,21,845	0/0:45,0:45:99:0,129,5696	0/1:21,0:21:62.37:62,0,1416	0/0:8,0:8:21.05:0,21,921	0/0:38,0:38:99:0,110,5066	0/1:18,0:18:79:79,0,856	0/1:7,3:10:99:145,0,678	0/1:11,4:15:99:325,0,883	1/1:0,5:5:9.03:314,9,0
chr10	5339607	.	G	GCCCTTCCTTCTC	2084.71	PASS	AB=0.962;AC=9;AF=0.167;AN=54;BaseQRankSum=4.124;DP=558;FS=18.737;HRun=0;HaplotypeScore=183.1343;InbreedingCoeff=-0.2134;MQ=52.66;MQ0=31;MQRankSum=-4.713;QD=11.27;ReadPosRankSum=0.818;VQSLOD=1.6926;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:18:45.61:0,46,1319	0/0:2,0:2:5.99:0,6,105	./.	0/0:18,0:3:3:0,3,26	0/0:21,0:21:51.14:0,51,1395	0/0:16,0:15:33.11:0,33,1056	0/0:32,0:32:75.13:0,75,1808	0/1:17,0:11:37.45:130,0,37	0/0:19,0:18:45.14:0,45,1211	0/0:21,0:20:42.13:0,42,1141	0/0:11,0:11:30.09:0,30,921	0/0:15,0:15:36.12:0,36,1127	0/0:14,0:14:33.09:0,33,1016	0/0:18,0:18:42.14:0,42,1312	0/1:27,0:25:99:609,0,445	0/1:24,1:25:99:327,0,600	0/1:35,0:35:99:237,0,969	0/0:25,0:24:51.11:0,51,1585	0/1:18,0:8:99:305,0,212	0/1:13,0:13:99:168,0,199	0/0:43,0:43:99:0,102,3096	0/1:18,0:18:99:133,0,546	0/0:10,0:10:27.08:0,27,687	0/0:42,0:42:99:0,108,3157	0/1:10,8:18:99:304,0,389	0/1:14,0:14:7.84:8,0,504	0/0:19,0:19:35.80:0,36,738	0/0:6,0:5:8.96:0,9,75
chr10	5339786	.	T	TAC	166.98	PASS	AB=1.000;AC=17;AF=0.354;AN=48;BaseQRankSum=1.659;DP=540;FS=3.444;HRun=0;HaplotypeScore=81.0856;InbreedingCoeff=0.4160;MQ=63.24;MQ0=25;MQRankSum=-0.715;QD=0.89;ReadPosRankSum=0.057;VQSLOD=1.2959;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:34,12:46:6.02:86,6,0	0/0:8,0:7:3:0,3,32	./.	./.	0/0:7,0:7:6:0,6,55	0/0:20,0:20:8.86:0,9,78	0/0:31,0:32:14.67:0,15,107	0/1:20,0:20:0:0,0,0	0/0:15,0:14:2.97:0,3,21	0/1:16,0:16:0:0,0,0	./.	0/0:18,0:18:5.75:0,6,55	0/1:10,0:9:2.05:2,0,17	0/0:11,0:12:2.84:0,3,14	1/1:17,0:14:3.01:41,3,0	0/0:20,0:20:5.67:0,6,29	0/0:26,0:25:0.54:0,1,10	1/1:23,0:22:11.70:95,12,0	1/1:10,0:9:0.47:1,0,0	0/0:6,0:5:2.95:0,3,19	0/0:35,0:34:3:0,3,32	1/1:19,0:19:2.99:24,3,0	0/0:7,0:6:9.01:0,9,88	0/0:23,0:22:12.01:0,12,119	1/1:7,0:6:3.01:41,3,0	1/1:20,0:18:0.47:1,0,0	0/0:17,0:16:8.52:0,9,42	./.
chr10	5339826	.	CACACACACACAG	C	1186.65	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=5.261;DP=565;FS=6.267;HRun=0;HaplotypeScore=166.0367;InbreedingCoeff=-0.0167;MQ=58.62;MQ0=13;MQRankSum=2.412;QD=6.70;ReadPosRankSum=-0.388;VQSLOD=1.6525;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:38:39.49:0,39,836	0/0:10,0:9:24.03:0,24,755	0/0:29,0:19:43.43:0,43,513	0/0:23,0:19:47.54:0,48,482	0/0:13,0:13:21.03:0,21,552	0/0:24,0:23:51.05:0,51,1350	0/0:35,0:34:73.80:0,74,1903	1/1:4,22:26:38.65:445,39,0	0/0:19,0:19:45.03:0,45,966	0/0:21,0:21:63.15:0,63,1377	0/0:14,0:14:25.73:0,26,498	0/0:16,0:16:33.50:0,33,726	0/0:12,0:11:24.03:0,24,579	0/0:18,0:18:48.11:0,48,1425	0/1:18,0:15:99:120,0,294	0/1:25,0:25:99:126,0,1191	0/1:33,0:32:16.06:16,0,81	0/0:23,0:22:41.94:0,42,890	0/1:11,0:9:59.74:60,0,276	0/0:8,0:7:15.05:0,15,581	0/0:41,0:40:87.08:0,87,2091	0/1:13,0:13:74.76:75,0,332	0/0:11,0:10:29.66:0,30,1041	0/0:32,0:31:69.09:0,69,1931	0/1:9,0:8:57.77:58,0,178	0/1:22,0:21:99:186,0,311	0/1:16,0:16:99:243,0,107	0/1:4,0:4:11.92:12,0,110
chr10	5339830	.	CACACACAG	C	1957.84	PASS	AB=1.000;AC=16;AF=0.286;AN=56;BaseQRankSum=4.015;DP=570;FS=12.781;HRun=0;HaplotypeScore=130.8820;InbreedingCoeff=0.4284;MQ=63.72;MQ0=12;MQRankSum=2.736;QD=11.19;ReadPosRankSum=0.281;VQSLOD=2.0548;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:40:44.90:0,45,593	0/0:10,0:9:24.02:0,24,522	0/0:31,0:21:49.35:0,49,535	0/0:26,0:22:56.03:0,56,523	0/0:14,0:14:27:0,27,421	0/0:26,0:25:57.04:0,57,957	0/0:41,0:40:91.40:0,91,1490	1/1:27,0:27:56.26:513,56,0	0/0:22,0:22:48:0,48,685	0/0:20,0:20:53.15:0,53,846	0/0:15,0:15:28.23:0,28,291	0/0:15,0:15:33.47:0,33,515	0/0:12,0:11:24:0,24,369	0/0:18,0:18:45.09:0,45,977	0/1:19,0:16:99:164,0,134	0/1:27,0:27:99:219,0,685	1/1:4,23:26:5.56:170,6,0	0/0:21,0:20:40.89:0,41,560	0/1:10,0:9:87.34:87,0,90	0/1:9,0:8:27.84:28,0,330	0/0:40,0:39:83.89:0,84,1267	0/1:13,0:13:96.70:97,0,203	0/0:12,0:11:32.66:0,33,788	0/0:31,0:29:75.06:0,75,1437	0/1:9,0:8:57.80:58,0,125	1/1:5,14:18:34:303,34,0	1/1:11,2:13:35.92:453,36,0	1/1:2,0:2:5.99:49,6,0
chr10	5340198	.	AC	A	1378.14	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=9.169;DP=554;FS=7.208;HRun=2;HaplotypeScore=50.6068;InbreedingCoeff=0.9719;MQ=58.59;MQ0=33;MQRankSum=-7.810;QD=30.63;ReadPosRankSum=-3.237;VQSLOD=1.7382;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:33:93.31:0,93,1384	0/0:13,0:12:33.10:0,33,474	0/0:21,0:9:27.04:0,27,332	0/0:22,0:10:26.91:0,27,336	0/0:8,0:6:12.03:0,12,160	0/0:22,0:20:60.19:0,60,877	0/0:32,0:32:96.33:0,96,1439	1/1:0,6:6:18.06:232,18,0	0/0:33,0:33:99:0,99,1483	0/0:25,0:16:48.14:0,48,669	0/0:10,0:7:21.07:0,21,314	0/0:26,0:26:78.25:0,78,1149	0/0:18,0:18:54.18:0,54,808	0/0:30,0:30:90.29:0,90,1311	0/0:26,0:26:75.23:0,75,1086	0/0:13,0:13:36.12:0,36,540	1/1:0,15:15:39.13:503,39,0	0/0:31,0:31:90.27:0,90,1325	0/0:15,0:8:21:0,21,267	0/0:12,0:9:27.09:0,27,403	0/0:39,0:33:93.30:0,93,1362	0/0:21,0:20:60.18:0,60,861	0/0:5,0:4:12.04:0,12,180	0/0:30,0:30:87.29:0,87,1302	0/0:12,0:10:30.09:0,30,432	1/1:2,11:12:33.11:426,33,0	1/1:0,7:7:18.06:232,18,0	1/1:0,4:4:12.04:156,12,0
chr10	5341088	.	A	AG	108.76	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-2.812;DP=468;FS=1.728;HRun=5;HaplotypeScore=49.1180;InbreedingCoeff=0.7902;MQ=65.49;MQ0=1;MQRankSum=-0.664;QD=13.60;ReadPosRankSum=-2.601;VQSLOD=1.6154;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:15:45.11:0,45,482	0/0:9,0:9:27.07:0,27,290	0/0:16,0:11:19.86:0,20,168	0/0:10,0:10:1.76:0,2,225	0/0:16,0:16:42.10:0,42,451	0/0:14,0:14:39.10:0,39,418	0/0:19,0:19:45.07:0,45,464	1/1:2,6:8:15.05:197,15,0	0/0:22,0:22:45.11:0,45,483	0/0:23,0:23:63.15:0,63,671	0/0:15,0:15:45.08:0,45,467	0/0:25,0:25:60.15:0,60,645	0/0:13,0:12:36.09:0,36,387	0/0:22,0:22:33.08:0,33,355	0/0:19,0:19:33.08:0,33,355	0/0:15,0:15:27.05:0,27,282	0/0:23,0:23:51.11:0,51,539	0/0:34,0:34:87.05:0,87,914	0/0:5,0:5:15.01:0,15,151	0/0:22,0:22:66.15:0,66,698	0/0:27,0:27:69.17:0,69,740	0/0:9,0:9:24.05:0,24,250	0/0:17,0:17:51.08:0,51,523	0/0:21,0:22:60.12:0,60,634	0/0:11,0:11:33.08:0,33,355	0/0:10,0:10:27.03:0,27,279	0/0:17,0:17:45.09:0,45,475	0/0:8,0:8:24.06:0,24,258
chr10	5341220	.	GGAA	G	858.04	PASS	AB=1.000;AC=6;AF=0.107;AN=56;BaseQRankSum=-0.129;DP=519;FS=3.299;HRun=0;HaplotypeScore=80.7136;InbreedingCoeff=0.2518;MQ=69.87;MQ0=6;MQRankSum=-0.622;QD=7.94;ReadPosRankSum=-4.423;VQSLOD=1.4419;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:50.31:0,50,915	0/0:8,0:8:24.08:0,24,533	0/0:26,0:15:19.20:0,19,556	0/0:35,0:22:30.45:0,30,504	0/0:26,0:26:63.15:0,63,1369	0/0:13,0:12:36.11:0,36,751	0/0:23,0:23:66.20:0,66,1349	0/1:28,0:26:99:281,0,134	0/0:11,0:11:33.10:0,33,714	0/0:20,0:20:60.15:0,60,1134	0/0:20,0:20:48.13:0,48,969	0/0:10,0:10:30.09:0,30,629	0/0:15,0:15:42.06:0,42,817	0/0:22,0:22:66.22:0,66,1428	0/0:14,0:14:42.12:0,42,861	0/0:14,0:14:39.12:0,39,855	1/1:3,17:20:33.11:562,33,0	0/0:24,0:25:75.17:0,75,1462	0/0:20,0:20:54.14:0,54,980	0/0:13,0:13:39.12:0,39,806	0/0:14,0:14:42.10:0,42,817	0/0:13,0:13:36.10:0,36,642	0/0:17,0:17:48.15:0,48,1013	0/0:16,0:16:39.59:0,40,855	0/0:19,0:19:50.98:0,51,979	0/1:20,0:20:30.47:30,0,403	0/1:26,0:26:83.71:84,0,565	0/1:14,0:14:32.38:32,0,333
chr10	5341563	.	TCTC	T	4788.76	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=13.163;DP=673;FS=0.000;HRun=0;HaplotypeScore=106.2310;InbreedingCoeff=0.9722;MQ=80.97;MQ0=0;MQRankSum=-5.427;QD=39.91;ReadPosRankSum=0.782;VQSLOD=5.9673;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,129,2917	0/0:12,0:12:36.12:0,36,802	0/0:17,0:18:50.89:0,51,972	0/0:25,0:26:73.59:0,74,1444	0/0:21,0:21:63.22:0,63,1434	0/0:21,0:20:60.21:0,60,1419	0/0:37,0:37:99:0,111,2479	1/1:2,22:24:60.18:991,60,0	0/0:19,0:19:57.18:0,57,1269	0/0:12,0:12:33.10:0,33,733	0/0:12,0:12:36.12:0,36,821	0/0:34,0:34:99:0,99,2308	0/0:26,0:26:78.27:0,78,1812	0/0:23,0:23:69.24:0,69,1631	0/0:31,0:31:93.32:0,93,2196	0/0:21,0:21:60.21:0,60,1393	1/1:3,31:34:75.26:1322,75,0	0/0:31,0:30:82.92:0,83,2046	0/0:23,0:23:66.22:0,66,1467	0/0:7,0:7:21.07:0,21,483	0/0:53,0:53:99:0,160,3655	0/0:19,0:19:57.20:0,57,1308	0/0:18,0:18:54.19:0,54,1243	0/0:30,0:30:90.31:0,90,2128	0/0:15,0:15:45.15:0,45,1031	1/1:1,26:27:7.30:1241,7,0	1/1:1,28:29:59.98:1024,60,0	1/1:0,6:6:12.04:211,12,0
chr10	5343500	.	C	CTGCCT	1052.98	PASS	AB=0.831;AC=5;AF=0.089;AN=56;BaseQRankSum=7.640;DP=846;FS=8.265;HRun=0;HaplotypeScore=225.9093;InbreedingCoeff=-0.1065;MQ=50.92;MQ0=24;MQRankSum=-6.555;QD=5.04;ReadPosRankSum=2.433;VQSLOD=1.0767;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:22,11:29:99:278,0,580	0/0:23,0:23:63.16:0,63,1281	0/0:21,0:12:35.33:0,35,653	0/0:22,0:12:33.11:0,33,716	0/0:16,0:13:32.62:0,33,605	0/0:25,0:25:48.15:0,48,1070	0/0:47,0:47:99:0,135,2910	0/0:22,0:11:10.15:0,10,516	0/0:48,0:48:99:0,129,2949	0/0:47,0:45:99:0,129,2674	0/0:16,0:16:36.04:0,36,739	0/0:41,0:41:99:0,114,2433	0/0:24,0:24:63.22:0,63,1443	0/0:39,0:39:99:0,111,2327	0/1:46,8:52:67.27:67,0,1739	0/1:47,9:56:99:426,0,2138	0/0:18,1:19:42.04:0,42,875	0/0:28,0:28:81.26:0,81,1797	0/1:38,2:21:74.24:74,0,803	0/0:17,0:15:20.21:0,20,372	0/0:68,0:65:99:0,168,3568	0/0:8,0:4:4.26:0,4,71	0/0:15,0:15:32.98:0,33,586	0/0:48,0:48:99:0,144,3088	0/0:20,0:16:19.94:0,20,197	0/0:11,0:7:21.06:0,21,428	0/1:16,10:26:99:325,0,682	0/0:12,0:12:33.05:0,33,616
chr10	5343501	.	A	ATGTT	1542.08	PASS	AB=0.879;AC=7;AF=0.125;AN=56;BaseQRankSum=10.440;DP=865;FS=22.054;HRun=0;HaplotypeScore=226.0552;InbreedingCoeff=-0.1501;MQ=51.25;MQ0=24;MQRankSum=-9.330;QD=5.71;ReadPosRankSum=-1.701;VQSLOD=0.9666;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:24,11:32:99:332,0,580	0/0:23,0:23:63.17:0,63,1223	0/0:22,0:14:36.12:0,36,679	0/0:22,0:12:36.12:0,36,722	0/0:16,0:13:33.11:0,33,668	0/0:25,0:25:47.93:0,48,992	0/0:47,0:47:99:0,132,2716	0/1:27,0:15:99:129,0,621	0/0:49,0:49:99:0,132,2726	0/0:46,0:44:99:0,132,2595	0/0:16,0:16:36.12:0,36,729	0/0:40,0:40:99:0,111,2313	0/0:24,0:24:63.22:0,63,1321	0/0:39,0:39:99:0,111,2280	0/1:49,8:54:99:174,0,1715	0/1:50,9:59:99:474,0,2298	0/1:20,1:21:76.24:76,0,919	0/0:28,0:28:81.28:0,81,1681	0/1:38,2:21:50.53:51,0,928	0/0:17,0:15:17.82:0,18,372	0/0:70,0:67:99:0,178,3481	0/0:7,0:4:4.26:0,4,66	0/0:15,0:15:36.11:0,36,674	0/0:48,0:48:99:0,144,2967	0/0:18,0:15:21.03:0,21,325	0/0:10,0:7:21.07:0,21,439	0/1:20,10:30:99:437,0,597	0/0:12,0:12:33.11:0,33,687
chr10	5343519	.	ACTGC	A	3375.74	PASS	AB=0.756;AC=13;AF=0.232;AN=56;BaseQRankSum=12.672;DP=771;FS=12.090;HRun=0;HaplotypeScore=204.4245;InbreedingCoeff=0.0130;MQ=69.40;MQ0=1;MQRankSum=-12.548;QD=15.21;ReadPosRankSum=1.736;VQSLOD=2.2840;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:11,20:28:74.43:535,0,74	0/0:21,0:21:63.22:0,63,1689	0/0:26,0:24:66.20:0,66,1596	0/0:30,0:28:73.63:0,74,1652	0/0:15,0:14:27.09:0,27,740	0/0:20,0:20:41.90:0,42,1119	0/0:50,0:49:99:0,138,3679	0/1:7,12:14:0.82:503,0,1	0/0:48,0:48:99:0,135,3628	0/0:43,0:42:99:0,120,3333	0/0:16,0:16:42.10:0,42,1081	0/0:36,0:36:99:0,99,2662	0/0:35,0:35:99:0,99,2671	0/0:41,0:41:99:0,117,3109	0/1:38,13:49:99:482,0,387	0/1:33,14:47:99:729,0,339	0/1:14,5:19:99:228,0,181	0/0:24,1:24:72.20:0,72,1950	0/1:9,4:8:91.36:167,0,91	1/1:2,0:2:0.47:1,0,0	0/0:80,1:78:99:0,220,5789	1/1:1,0:1:0.47:1,0,0	0/0:12,0:12:30.02:0,30,732	0/0:46,0:46:99:0,132,3620	0/1:6,0:6:2.16:2,0,73	0/1:4,1:3:18.31:56,0,18	0/1:11,17:28:99:671,0,103	0/0:4,0:4:8.10:0,8,48
chr10	5343524	.	CATCT	C	2859.80	PASS	AB=0.768;AC=18;AF=0.333;AN=54;BaseQRankSum=15.294;DP=733;FS=14.246;HRun=0;HaplotypeScore=195.4609;InbreedingCoeff=0.7322;MQ=73.65;MQ0=0;MQRankSum=-14.408;QD=15.63;ReadPosRankSum=-0.399;VQSLOD=2.4387;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:23,6:28:21.85:389,22,0	0/0:22,0:22:60.16:0,60,1640	0/0:29,0:27:42.94:0,43,1503	0/0:33,0:31:81.33:0,81,1774	0/0:14,0:14:36.12:0,36,942	0/0:18,0:18:42.10:0,42,1077	0/0:45,0:44:99:0,132,3781	0/1:15,3:17:99:185,0,185	0/0:48,0:48:99:0,141,3807	0/0:43,0:43:99:0,126,3490	0/0:16,0:16:42.13:0,42,1068	0/0:38,0:38:99:0,105,2942	0/0:36,0:36:99:0,105,2965	0/0:40,0:40:99:0,114,3176	0/1:21,21:41:97.69:798,0,98	1/1:14,11:27:58.48:609,58,0	1/1:5,7:16:26.83:343,27,0	0/0:24,0:23:69.24:0,69,1978	1/1:4,3:6:4.28:139,4,0	0/0:0,0:2:0.41:0,0,0	0/0:82,2:81:99:0,226,6247	./.	0/0:10,0:10:27.09:0,27,682	0/0:47,0:47:99:0,141,3952	1/1:1,5:6:12.47:197,12,0	1/1:1,3:2:3.48:64,3,0	1/1:17,8:25:7.91:204,8,0	1/1:0,3:4:9.02:120,9,0
chr10	5343567	.	TAC	T	133.56	PASS	AB=0.724;AC=1;AF=0.018;AN=56;BaseQRankSum=3.515;DP=779;FS=6.387;HRun=0;HaplotypeScore=136.9455;InbreedingCoeff=-0.0421;MQ=58.42;MQ0=34;MQRankSum=-1.564;QD=6.36;ReadPosRankSum=-2.056;VQSLOD=2.5911;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:35:71.95:0,72,1117	0/0:16,0:16:32.84:0,33,576	0/0:31,0:10:9.03:0,9,159	0/0:37,0:17:32.32:0,32,533	0/0:13,0:13:24.08:0,24,424	0/0:13,0:13:15.05:0,15,266	0/0:59,0:59:99:0,154,2679	0/0:47,0:36:90.31:0,90,1596	0/0:55,0:55:99:0,157,2707	0/0:47,0:45:99:0,117,1979	0/0:9,0:9:24.08:0,24,425	0/0:53,0:53:99:0,138,2439	0/0:36,0:36:99:0,102,1807	0/0:50,0:50:99:0,135,2385	0/0:34,0:33:63.21:0,63,1108	0/1:13,8:21:99:208,0,292	0/0:21,0:21:45.15:0,45,770	0/0:27,0:27:72.25:0,72,1277	0/0:5,0:1:3.01:0,3,53	0/0:1,0:1:3.01:0,3,53	0/0:71,0:68:99:0,172,3016	0/0:4,0:4:6.02:0,6,101	0/0:7,0:7:15.05:0,15,265	0/0:34,0:34:96.33:0,96,1687	0/0:7,0:7:18.06:0,18,317	0/0:18,0:17:48.11:0,48,790	0/0:22,0:22:52.33:0,52,881	0/0:3,0:3:6.02:0,6,106
chr10	5343819	.	TAC	T	117.37	PASS	AB=0.907;AC=6;AF=0.188;AN=32;BaseQRankSum=0.615;DP=652;FS=0.000;HRun=0;HaplotypeScore=65.3598;InbreedingCoeff=0.1655;MQ=20.25;MQ0=377;MQRankSum=0.663;QD=1.12;ReadPosRankSum=-0.568;VQSLOD=1.3747;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	0/0:14,0:9:3:0,3,53	./.	./.	0/1:8,0:4:0:0,0,0	./.	0/0:44,0:14:8.83:0,9,159	0/0:34,3:17:45.15:0,45,796	0/0:21,0:11:10.28:0,10,162	0/0:34,0:10:21.03:0,21,337	./.	0/0:40,0:26:40.18:0,40,656	0/0:31,0:17:21.04:0,21,340	0/0:35,0:18:9.03:0,9,159	./.	0/1:35,3:27:10.59:11,0,448	0/0:20,10:9:9.03:0,9,159	./.	0/1:24,3:8:17.13:17,0,348	1/1:9,3:7:6.01:82,6,0	0/0:63,0:9:3.01:0,3,53	./.	./.	0/0:32,0:19:0.68:0,1,2	./.	0/1:15,5:7:99:106,0,140	./.	./.
chr10	5344728	.	TTCCTGGGCTCCC	T	342.37	PASS	AB=0.950;AC=6;AF=0.115;AN=52;BaseQRankSum=10.318;DP=563;FS=18.155;HRun=0;HaplotypeScore=174.0578;InbreedingCoeff=0.1256;MQ=37.86;MQ0=124;MQRankSum=-7.118;QD=5.61;ReadPosRankSum=1.344;VQSLOD=1.0624;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:16:42.14:0,42,2484	0/0:8,0:6:18.06:0,18,1077	./.	./.	0/0:21,0:18:36.12:0,36,2195	0/0:23,0:15:39.13:0,39,2325	0/0:27,0:20:45.15:0,45,2632	0/1:16,0:15:64.72:65,0,123	0/0:23,0:19:48.16:0,48,2854	0/0:26,0:22:63.22:0,63,3888	0/0:24,0:22:51.17:0,51,2947	0/0:23,0:15:35.83:0,36,2154	0/0:30,0:25:56.83:0,57,3255	0/0:29,0:25:57.20:0,57,3417	0/0:33,0:31:69.24:0,69,4222	0/0:25,0:21:50.93:0,51,3128	0/1:15,0:14:49.73:50,0,68	0/0:20,0:13:36.12:0,36,2007	0/0:18,0:14:36.12:0,36,1727	0/0:15,0:14:39.13:0,39,2103	0/0:37,0:27:63.22:0,63,3759	0/0:12,0:8:15.05:0,15,800	0/0:14,0:12:33.11:0,33,1981	0/0:23,0:16:41.73:0,42,2488	0/0:21,0:18:42.14:0,42,2432	0/1:12,4:16:99:278,0,161	0/1:13,0:13:20.32:55,0,20	1/1:1,0:1:2.60:10,3,0
chr10	5344732	.	TGGGC	T	1636.10	PASS	AB=0.636;AC=9;AF=0.173;AN=52;BaseQRankSum=10.628;DP=550;FS=23.955;HRun=0;HaplotypeScore=101.1169;InbreedingCoeff=0.8091;MQ=38.83;MQ0=121;MQRankSum=-8.253;QD=33.39;ReadPosRankSum=0.080;VQSLOD=1.4542;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:18:45.15:0,45,1293	0/0:8,0:6:18.06:0,18,521	./.	./.	0/0:20,0:17:36.12:0,36,1042	0/0:22,0:14:39.13:0,39,1097	0/0:25,0:18:45.15:0,45,1301	1/1:1,10:10:30.10:472,30,0	0/0:21,0:18:51.18:0,51,1458	0/0:28,0:24:72.25:0,72,2084	0/0:22,0:20:51.13:0,51,1399	0/0:24,0:16:38.77:0,39,1124	0/0:30,0:25:62.80:0,63,1792	0/0:30,0:26:60.21:0,60,1733	0/0:33,0:31:72.25:0,72,2076	0/0:24,0:21:51.18:0,51,1476	1/1:0,10:10:27.07:417,27,0	0/0:20,0:13:33.11:0,33,956	0/0:16,0:12:33.04:0,33,814	0/0:15,0:14:42.14:0,42,1135	0/0:40,0:30:72.25:0,72,2014	0/0:12,0:8:15.05:0,15,405	0/0:16,0:14:39.13:0,39,1121	0/0:23,0:16:41.91:0,42,1150	0/0:20,0:17:42.14:0,42,1186	0/1:6,8:14:52.77:368,0,53	1/1:1,12:13:36.04:486,36,0	1/1:0,1:1:3.01:47,3,0
chr10	5344737	.	TCC	T	975.12	PASS	AC=10;AF=0.192;AN=52;BaseQRankSum=10.406;DP=551;FS=24.058;HRun=3;HaplotypeScore=85.5765;InbreedingCoeff=0.9377;MQ=39.94;MQ0=114;MQRankSum=-8.420;QD=20.75;ReadPosRankSum=-0.126;VQSLOD=0.2979;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:24:60.12:0,60,1072	0/0:10,0:8:24.04:0,24,425	./.	./.	0/0:18,0:16:36.12:0,36,694	0/0:21,0:14:39.10:0,39,715	0/0:25,0:20:48.09:0,48,850	1/1:0,10:10:30.06:302,30,0	0/0:22,0:19:51.13:0,51,947	0/0:30,0:26:78.24:0,78,1441	0/0:23,0:21:54.14:0,54,1002	0/0:24,0:16:42.14:0,42,776	0/0:29,0:24:60.13:0,60,1107	0/0:28,0:25:60.12:0,60,1071	0/0:32,0:30:72.20:0,72,1351	0/0:26,0:23:57.12:0,57,1048	1/1:0,10:10:27.02:265,27,0	0/0:19,0:13:36.08:0,36,657	0/0:13,0:9:27.09:0,27,519	0/0:17,0:16:42.13:0,42,770	0/0:39,0:29:72.23:0,72,1352	0/0:11,0:7:12.04:0,12,231	0/0:17,0:15:41.30:0,41,717	0/0:23,0:17:45.07:0,45,868	0/0:19,0:16:42.04:0,42,766	1/1:5,8:13:10.23:260,10,0	1/1:1,12:13:29.92:279,30,0	1/1:0,1:1:3.01:30,3,0
chr10	5345653	.	AT	A	4929.54	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=15.862;DP=625;FS=3.058;HRun=8;HaplotypeScore=80.5626;InbreedingCoeff=0.9865;MQ=77.65;MQ0=0;MQRankSum=-3.451;QD=19.11;ReadPosRankSum=1.402;VQSLOD=4.7658;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,108,1266	0/0:8,0:8:24.07:0,24,289	0/0:23,0:22:64.95:0,65,742	0/0:12,0:12:7.09:0,7,214	0/0:29,0:31:92.99:0,93,1050	0/0:18,0:17:54.17:0,54,652	0/0:31,0:31:84.26:0,84,1014	1/1:4,25:29:75.11:719,75,0	0/0:19,0:19:51.16:0,51,616	0/0:33,0:33:93.28:0,93,1112	0/0:15,0:15:42.13:0,42,505	0/0:22,0:22:66.18:0,66,778	0/0:18,1:19:25.17:0,25,574	0/0:19,1:20:22.16:0,22,534	1/1:2,12:14:36.05:348,36,0	1/1:2,0:20:38.70:114,39,0	1/1:6,39:45:99:1068,109,0	0/0:28,0:28:78.24:0,78,942	1/1:3,0:23:37.05:114,37,0	1/1:2,0:22:40.74:120,41,0	0/0:13,0:13:33.10:0,33,399	1/1:0,0:14:26.48:78,26,0	0/0:11,0:11:33.10:0,33,399	0/0:23,0:23:63.18:0,63,750	1/1:2,15:17:39.06:377,39,0	1/1:3,24:27:72.10:690,72,0	1/1:2,28:30:84.13:811,84,0	1/1:0,17:17:51.08:492,51,0
chr10	5345703	.	TAGA	T	3061.05	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=11.922;DP=643;FS=0.000;HRun=0;HaplotypeScore=119.0936;InbreedingCoeff=0.8670;MQ=73.62;MQ0=0;MQRankSum=-6.679;QD=26.85;ReadPosRankSum=2.173;VQSLOD=3.8206;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,132,2748	0/0:10,0:10:27.09:0,27,576	0/0:18,0:14:24.86:0,25,374	0/1:25,0:21:25.60:26,0,383	0/0:24,0:24:66.23:0,66,1381	0/0:24,0:24:69.24:0,69,1434	0/0:26,0:26:75.23:0,75,1507	0/0:22,0:22:54.19:0,54,1130	0/0:18,0:18:54.14:0,54,1078	0/0:33,0:33:87.30:0,87,1850	0/0:21,0:21:60.20:0,60,1228	0/0:23,0:23:63.22:0,63,1340	0/0:17,0:17:51.17:0,51,1048	0/0:17,0:17:45.15:0,45,961	0/0:19,0:19:54.19:0,54,1153	1/1:6,17:23:57.19:842,57,0	0/0:32,0:32:78.27:0,78,1664	0/0:36,0:36:99:0,102,2107	1/1:6,12:18:36.12:552,36,0	1/1:4,24:28:69.23:1048,69,0	0/0:13,0:13:36.12:0,36,768	1/1:1,19:20:51.17:759,51,0	0/0:24,0:24:69.24:0,69,1447	0/0:20,0:20:54.19:0,54,1152	0/0:22,0:22:51.17:0,51,1088	0/0:24,0:24:66.23:0,66,1408	0/0:27,0:27:72.25:0,72,1493	0/0:12,0:12:27.09:0,27,572
chr10	5349398	.	C	CT	1795.70	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-9.463;DP=764;FS=5.536;HRun=3;HaplotypeScore=73.0558;InbreedingCoeff=0.9994;MQ=80.91;MQ0=0;MQRankSum=-4.487;QD=37.41;ReadPosRankSum=1.605;VQSLOD=4.2254;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,46:48:99:1891,135,0	0/0:10,0:10:30.09:0,30,360	0/0:28,0:28:78.15:0,78,893	0/0:19,0:19:42.08:0,42,469	0/0:33,0:33:93.28:0,93,1115	0/0:21,0:21:57.17:0,57,684	0/0:28,0:28:78.24:0,78,936	0/0:38,0:38:99:0,99,1179	0/0:23,0:23:60.18:0,60,720	0/0:16,0:16:48.15:0,48,576	0/0:15,0:15:39.11:0,39,457	0/0:34,0:34:87.26:0,87,1042	0/0:35,0:35:96.28:0,96,1140	0/0:27,0:27:72.20:0,72,851	0/0:32,0:32:90.27:0,90,1080	0/0:26,0:26:75.21:0,75,878	0/0:35,0:35:99:0,102,1209	0/0:29,0:29:78.22:0,78,922	0/0:25,0:25:60.17:0,60,709	0/0:35,0:35:99:0,99,1176	0/0:31,0:31:90.28:0,90,1080	0/0:29,0:29:87.25:0,87,1032	0/0:26,0:26:66.19:0,66,780	0/0:27,0:27:78.24:0,78,935	0/0:23,0:23:54.16:0,54,647	0/0:28,0:28:78.24:0,78,936	0/0:24,0:24:69.21:0,69,828	0/0:19,0:19:57.17:0,57,684
chr10	5352000	.	G	GA	1727.53	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-10.075;DP=758;FS=5.042;HRun=7;HaplotypeScore=79.8927;InbreedingCoeff=0.9890;MQ=85.46;MQ0=0;MQRankSum=-1.455;QD=26.58;ReadPosRankSum=0.980;VQSLOD=4.4084;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,114,1054	0/0:10,0:10:27.03:0,27,255	0/0:28,0:28:60.08:0,60,575	0/0:20,0:20:31.22:0,31,360	0/0:19,0:19:51.07:0,51,492	0/0:10,0:10:14.24:0,14,123	0/0:33,0:33:90.13:0,90,864	0/0:37,0:37:90.14:0,90,868	0/0:29,0:29:81.11:0,81,776	0/0:22,0:22:56.13:0,56,512	0/0:16,0:16:42.95:0,43,405	0/0:26,0:26:52.22:0,52,646	0/0:33,0:33:96.12:0,96,915	0/0:31,0:31:78.10:0,78,747	1/1:3,31:34:90.75:1088,91,0	0/0:38,0:38:99:0,99,951	0/0:37,0:37:99:0,102,975	0/0:20,0:20:57.07:0,57,543	0/0:17,0:17:42.06:0,42,405	0/0:31,0:31:75.06:0,75,715	0/0:38,0:38:92.68:0,93,847	0/0:25,0:25:56.92:0,57,504	0/0:23,0:23:42.03:0,42,399	0/0:34,0:34:81.11:0,81,777	1/1:2,29:30:63.19:761,63,0	0/0:29,0:29:78.11:0,78,749	0/0:30,0:30:81.13:0,81,782	0/0:9,0:9:27.04:0,27,261
chr10	5352737	.	GGTGTGTGTGTGTGT	G	2974.58	PASS	AB=0.750;AC=11;AF=0.212;AN=52;BaseQRankSum=8.652;DP=590;FS=0.000;HRun=0;HaplotypeScore=215.9205;InbreedingCoeff=0.7972;MQ=64.98;MQ0=10;MQRankSum=-7.186;QD=23.42;ReadPosRankSum=0.035;VQSLOD=2.5087;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:23:12.04:0,12,291	0/0:6,0:6:12.04:0,12,477	./.	./.	0/0:20,0:20:27.08:0,27,1198	0/0:23,0:23:21.07:0,21,1219	0/0:20,0:22:24.07:0,24,1177	0/0:24,0:24:9.50:0,10,174	0/0:12,0:12:18.06:0,18,1011	0/0:20,0:20:29.38:0,29,1130	0/0:16,0:16:18.06:0,18,922	0/0:13,0:13:21.04:0,21,827	0/0:16,0:17:21.54:0,22,1163	0/0:17,0:17:30.09:0,30,1433	1/1:14,0:21:15.05:488,15,0	0/0:12,0:21:29.13:0,29,869	0/1:14,0:21:15.27:267,0,15	0/0:28,0:29:51.13:0,51,2659	0/0:27,0:26:16.58:0,17,372	0/0:14,0:14:12.03:0,12,329	0/0:31,0:29:36.59:0,37,1923	0/0:11,0:15:7.87:0,8,302	0/0:14,0:22:9:0,9,189	0/0:39,0:40:75.26:0,75,4509	1/1:15,0:22:23.95:647,24,0	1/1:19,3:22:9.02:282,9,0	1/1:14,7:23:11.06:523,11,0	1/1:5,13:17:24.08:934,24,0
chr10	5355127	.	A	AT	261.97	PASS	AB=0.877;AC=10;AF=0.179;AN=56;BaseQRankSum=7.365;DP=469;FS=9.677;HRun=0;HaplotypeScore=72.9420;InbreedingCoeff=0.0151;MQ=80.08;MQ0=1;MQRankSum=-5.744;QD=2.82;ReadPosRankSum=-2.635;VQSLOD=1.2468;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:16,1:17:16.43:0,16,509	0/0:5,0:5:15.05:0,15,210	0/0:18,0:18:35.81:0,36,455	0/0:21,0:20:51.12:0,51,633	0/0:13,0:13:39.13:0,39,543	0/0:11,0:11:33.11:0,33,461	0/0:28,0:28:81.26:0,81,1116	0/0:14,0:14:42.14:0,42,587	0/0:10,0:10:30.08:0,30,399	0/0:15,0:15:45.14:0,45,611	0/0:8,0:8:24.08:0,24,335	0/0:28,0:28:84.24:0,84,1144	0/0:23,0:23:63.13:0,63,778	0/0:21,0:21:60.19:0,60,822	0/1:13,1:13:58.14:58,0,197	0/1:14,4:18:72.81:73,0,338	1/1:2,3:5:11.95:97,12,0	0/0:28,0:28:78.26:0,78,1090	0/1:9,2:10:61.35:61,0,204	0/0:5,2:7:15.05:0,15,206	0/0:58,0:58:99:0,171,2300	0/1:7,1:8:9.97:10,0,131	0/0:14,0:14:42.12:0,42,567	0/0:37,0:37:99:0,108,1437	0/1:10,1:12:23.08:23,0,265	0/1:11,1:12:24.17:24,0,378	0/1:4,2:6:43.52:44,0,90	0/1:6,0:6:20.10:20,0,121
chr10	5355128	.	G	GGA	361.47	PASS	AB=0.883;AC=9;AF=0.161;AN=56;BaseQRankSum=7.241;DP=467;FS=6.548;HRun=0;HaplotypeScore=84.2529;InbreedingCoeff=0.0343;MQ=80.96;MQ0=1;MQRankSum=-7.239;QD=4.36;ReadPosRankSum=-2.754;VQSLOD=1.3102;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:17,1:18:6.10:0,6,549	0/0:5,0:5:15.05:0,15,230	0/0:19,0:19:39.05:0,39,514	0/0:21,0:20:48.14:0,48,698	0/0:13,0:13:39.13:0,39,596	0/0:11,0:11:33.11:0,33,505	0/0:28,0:28:84.24:0,84,1240	0/0:14,0:14:42.14:0,42,643	0/0:10,0:10:30.09:0,30,439	0/0:15,0:15:45.14:0,45,669	0/0:8,0:8:24.08:0,24,367	0/0:28,0:28:84.27:0,84,1263	0/0:22,0:22:63.13:0,63,863	0/0:21,0:21:60.19:0,60,897	0/1:11,1:11:35.11:35,0,236	0/1:14,4:18:99:113,0,374	1/1:3,3:5:10.84:112,11,0	0/0:28,0:28:78.26:0,78,1194	0/1:9,2:10:93.41:93,0,224	0/0:5,2:7:15.05:0,15,226	0/0:57,0:58:99:0,166,2480	0/0:7,1:8:1.73:0,2,128	0/0:14,0:14:42.14:0,42,633	0/0:36,0:36:99:0,102,1535	0/1:11,1:12:6.51:7,0,297	0/1:11,1:12:44.39:44,0,415	0/1:4,2:6:63.57:64,0,97	0/1:6,0:6:34.49:34,0,121
chr10	5355129	.	GGGCAT	G	408.81	PASS	AB=0.966;AC=8;AF=0.143;AN=56;BaseQRankSum=6.680;DP=459;FS=3.687;HRun=0;HaplotypeScore=104.4982;InbreedingCoeff=0.0897;MQ=82.25;MQ0=0;MQRankSum=-6.848;QD=5.05;ReadPosRankSum=-2.143;VQSLOD=1.4703;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:17,1:18:41.59:42,0,1183	0/0:5,0:5:15.05:0,15,457	0/0:19,0:19:45.15:0,45,1267	0/0:21,0:20:47.53:0,48,1327	0/0:13,0:13:39.13:0,39,1244	0/0:11,0:11:33.11:0,33,1027	0/0:29,0:29:87.28:0,87,2550	0/0:14,0:14:42.14:0,42,1316	0/0:10,0:10:30.09:0,30,895	0/0:15,0:15:42.14:0,42,1313	0/0:8,0:8:24.08:0,24,775	0/0:28,0:28:84.28:0,84,2578	0/0:22,0:22:56.85:0,57,1716	0/0:20,0:20:57.20:0,57,1839	0/1:11,1:11:99:101,0,460	0/1:18,0:18:99:122,0,891	1/1:4,2:5:10.58:163,11,0	0/0:28,0:28:78.27:0,78,2432	0/1:9,0:9:30.42:30,0,477	0/0:7,0:7:15.05:0,15,483	0/0:56,0:56:99:0,166,5169	0/0:7,0:7:9.03:0,9,291	0/0:14,0:14:42.14:0,42,1291	0/0:35,0:35:99:0,102,3213	0/0:10,0:10:16.53:0,17,671	0/1:11,1:12:46.74:47,0,874	0/1:6,0:6:43.46:43,0,200	0/0:6,0:6:9.03:0,9,242
chr10	5355139	.	G	GC	79.88	PASS	AB=0.883;AC=4;AF=0.071;AN=56;BaseQRankSum=5.130;DP=414;FS=0.000;HRun=0;HaplotypeScore=62.6614;InbreedingCoeff=0.3079;MQ=92.07;MQ0=0;MQRankSum=-4.194;QD=2.58;ReadPosRankSum=-2.296;VQSLOD=1.8088;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,1:18:18.41:0,18,556	0/0:4,0:4:12.04:0,12,168	0/0:18,0:18:47.15:0,47,658	0/0:22,0:22:54.14:0,54,702	0/0:12,0:12:36.12:0,36,502	0/0:9,0:9:27.09:0,27,377	0/0:23,0:23:69.19:0,69,924	0/0:14,0:14:42.14:0,42,587	0/0:9,0:9:27.09:0,27,375	0/0:11,0:11:33.11:0,33,462	0/0:9,0:9:24.08:0,24,335	0/0:24,0:24:72.23:0,72,984	0/0:20,0:20:60.17:0,60,817	0/0:17,0:17:51.17:0,51,709	0/0:7,0:7:18.04:0,18,232	0/1:14,3:17:99:102,0,380	1/1:1,2:2:5.89:62,6,0	0/0:28,0:28:75.25:0,75,1045	0/0:8,0:8:21.07:0,21,293	0/0:5,2:7:15.04:0,15,187	0/0:56,0:56:99:0,166,2285	0/0:5,1:6:12.03:0,12,150	0/0:13,0:13:39.12:0,39,527	0/0:33,0:33:96.30:0,96,1323	0/0:9,0:9:19.83:0,20,280	0/1:10,1:11:20.15:20,0,308	0/0:3,0:3:6.02:0,6,81	0/0:3,0:3:6.02:0,6,84
chr10	5355182	.	T	TG	154.86	PASS	AB=0.800;AC=5;AF=0.089;AN=56;BaseQRankSum=5.143;DP=276;FS=5.315;HRun=1;HaplotypeScore=45.9244;InbreedingCoeff=0.2043;MQ=86.99;MQ0=0;MQRankSum=-5.011;QD=4.69;ReadPosRankSum=-1.850;VQSLOD=-0.1724;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:9,3:12:73.62:74,0,278	0/0:1,0:1:3.01:0,3,39	0/0:14,0:14:42.11:0,42,517	0/0:10,0:10:27.09:0,27,351	0/0:6,0:6:18.06:0,18,234	0/0:7,0:7:21.06:0,21,258	0/0:24,0:24:72.23:0,72,918	0/0:12,0:12:33.11:0,33,426	0/0:3,0:3:5.62:0,6,26	0/0:4,0:4:11.90:0,12,132	0/0:5,0:5:12.04:0,12,156	0/0:15,0:15:42.11:0,42,528	0/0:11,0:11:27.09:0,27,348	0/0:8,0:8:21.07:0,21,271	0/1:6,2:8:72.16:72,0,100	0/0:9,0:9:27.09:0,27,351	1/1:1,4:5:11.02:99,11,0	0/0:18,0:18:48.16:0,48,620	0/0:7,0:7:21.07:0,21,272	0/0:3,0:3:9.03:0,9,117	0/0:40,0:40:99:0,111,1416	0/0:2,0:2:3.01:0,3,37	0/0:10,0:10:30.10:0,30,389	0/0:21,0:21:60.18:0,60,755	0/1:6,2:8:27.42:27,0,112	0/0:7,0:7:21.07:0,21,272	0/0:3,0:3:9.03:0,9,112	0/0:3,0:3:9.03:0,9,117
chr10	5355198	.	TG	T	340.97	PASS	AB=0.858;AC=11;AF=0.204;AN=54;BaseQRankSum=2.844;DP=249;FS=0.000;HRun=6;HaplotypeScore=51.8567;InbreedingCoeff=0.4944;MQ=76.55;MQ0=0;MQRankSum=-0.091;QD=7.25;ReadPosRankSum=-1.396;VQSLOD=-0.6999;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:39.10:0,39,466	./.	0/1:9,1:9:19.75:20,0,71	0/0:8,0:6:12.03:0,12,145	0/0:7,0:7:15.05:0,15,197	0/0:4,0:4:6.02:0,6,79	0/0:19,0:19:54.18:0,54,710	0/0:10,0:10:21.06:0,21,264	0/0:8,0:8:7.65:0,8,70	0/0:2,0:2:6.02:0,6,79	0/0:3,0:3:6.02:0,6,79	0/0:15,0:15:36.11:0,36,459	0/0:10,0:10:27.08:0,27,343	0/0:9,0:9:23.98:0,24,263	0/1:7,2:9:13.23:13,0,125	1/1:3,4:7:15.04:161,15,0	0/0:12,0:12:25.97:0,26,274	0/0:15,0:15:27.09:0,27,352	1/1:1,4:5:12.03:129,12,0	1/1:1,2:3:6.01:64,6,0	0/0:27,0:27:66.13:0,66,812	1/1:1,1:2:6.02:64,6,0	0/0:9,0:9:21.07:0,21,276	0/0:16,0:16:45.14:0,45,577	0/1:9,2:11:43.50:44,0,109	0/0:8,0:8:21.06:0,21,262	0/0:3,0:3:6.02:0,6,79	0/0:3,0:3:9.03:0,9,118
chr10	5355226	.	AGGGCATGG	A	837.21	PASS	AB=1.000;AC=12;AF=0.231;AN=52;BaseQRankSum=4.720;DP=186;FS=4.506;HRun=0;HaplotypeScore=66.2878;InbreedingCoeff=0.2823;MQ=61.71;MQ0=1;MQRankSum=-5.680;QD=11.02;ReadPosRankSum=1.782;VQSLOD=1.4408;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:14,0:14:99:125,0,99	0/0:3,0:3:9.03:0,9,340	0/0:3,0:2:5.23:0,5,121	0/0:5,0:3:6:0,6,83	0/0:2,0:2:3.01:0,3,127	0/0:4,0:4:9.02:0,9,277	0/0:9,0:9:11.98:0,12,288	0/0:6,0:6:12.04:0,12,474	0/0:5,0:5:12.04:0,12,382	./.	0/0:2,0:2:6.02:0,6,179	0/0:10,0:10:18.04:0,18,537	0/0:7,0:7:1.68:0,2,22	0/0:9,0:9:20.98:0,21,476	0/1:13,0:11:18.16:18,0,113	0/0:6,0:6:0.50:0,1,93	1/1:11,1:12:18.03:258,18,0	0/0:5,0:5:6.02:0,6,128	0/1:6,0:4:18.48:18,0,21	./.	0/0:16,0:16:18.02:0,18,348	0/0:4,0:4:6.02:0,6,139	0/0:6,0:6:9.02:0,9,274	0/0:5,0:5:9.03:0,9,274	0/1:14,0:14:60.75:61,0,137	1/1:7,2:9:15.05:273,15,0	1/1:2,2:4:3.01:78,3,0	1/1:3,1:4:6.02:155,6,0
chr10	5355234	.	G	GA	216.34	PASS	AB=0.911;AC=5;AF=0.093;AN=54;BaseQRankSum=5.132;DP=177;FS=17.469;HRun=0;HaplotypeScore=55.6941;InbreedingCoeff=-0.1444;MQ=61.23;MQ0=0;MQRankSum=-5.429;QD=3.33;ReadPosRankSum=-0.864;VQSLOD=1.1604;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:8,4:12:81:146,0,81	0/0:3,0:3:9.03:0,9,126	0/0:3,0:3:8:0,8,60	0/0:5,0:3:6.02:0,6,71	0/0:1,0:1:3.01:0,3,42	0/0:4,0:4:12.04:0,12,168	0/0:9,0:9:21.05:0,21,263	0/0:5,0:5:15.04:0,15,193	0/0:5,0:5:15.04:0,15,194	0/0:2,0:2:6.01:0,6,70	0/0:2,0:2:6.02:0,6,84	0/0:7,0:7:21.07:0,21,293	0/0:6,0:6:16.55:0,17,185	0/0:9,0:9:27.01:0,27,333	0/1:12,1:11:84.82:85,0,99	0/0:5,0:5:11.68:0,12,89	0/1:12,2:14:38.67:39,0,121	0/0:3,0:3:6.02:0,6,83	0/0:6,0:5:11.56:0,12,116	./.	0/0:16,0:16:42.02:0,42,463	0/0:7,0:7:15.05:0,15,209	0/0:3,0:3:9.03:0,9,126	0/0:5,0:5:15.04:0,15,191	0/1:18,0:18:52.97:53,0,179	0/1:8,0:8:2.26:2,0,100	0/0:3,0:3:5.49:0,5,33	0/0:3,0:3:8.17:0,8,45
chr10	5355248	.	TGAGGGCATGGGGGGCAA	T	263.07	PASS	AB=1.000;AC=5;AF=0.100;AN=50;BaseQRankSum=2.821;DP=169;FS=0.000;HRun=0;HaplotypeScore=97.2777;InbreedingCoeff=0.0778;MQ=65.11;MQ0=0;MQRankSum=-3.535;QD=5.37;ReadPosRankSum=1.328;VQSLOD=1.4979;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,10:14:3.01:138,3,0	0/0:3,0:3:3.01:0,3,204	./.	0/1:6,0:5:6.97:7,0,96	0/0:2,0:2:6.02:0,6,377	0/0:3,0:3:9.03:0,9,413	0/0:8,0:8:15.05:0,15,496	0/0:5,0:5:6.01:0,6,120	0/0:8,0:8:15.05:0,15,663	0/0:2,0:2:3.01:0,3,97	0/0:3,0:3:6.02:0,6,256	0/0:7,0:6:15.05:0,15,784	./.	0/0:7,0:7:9.03:0,9,474	0/1:12,0:10:7.47:198,0,7	0/0:5,0:5:3.01:0,3,119	0/0:10,0:11:17.57:0,18,472	0/0:7,0:7:15.05:0,15,392	0/0:6,0:6:5.70:0,6,101	./.	0/0:10,0:10:18.06:0,18,907	0/0:6,0:6:12.04:0,12,551	0/0:4,0:3:9.03:0,9,484	0/0:7,0:7:15.05:0,15,612	0/1:16,0:16:22.98:23,0,65	0/0:6,0:6:9.03:0,9,273	0/0:3,0:3:6.02:0,6,184	0/0:2,0:2:6.02:0,6,128
chr10	5355261	.	GGCA	G	77.52	PASS	AB=0.821;AC=3;AF=0.054;AN=56;BaseQRankSum=4.333;DP=174;FS=4.665;HRun=0;HaplotypeScore=47.2077;InbreedingCoeff=-0.0973;MQ=61.22;MQ0=0;MQRankSum=-3.887;QD=2.35;ReadPosRankSum=3.023;VQSLOD=0.9884;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:11,0:11:11.56:12,0,20	0/0:2,0:2:6.02:0,6,146	0/0:2,0:2:5.38:0,5,71	0/0:6,0:5:15.05:0,15,278	0/0:4,0:4:8.62:0,9,216	0/0:5,0:5:15.05:0,15,341	0/0:9,0:9:24.08:0,24,536	0/0:10,0:10:30.10:0,30,703	0/0:6,0:6:18.06:0,18,409	0/0:2,0:2:3.01:0,3,73	0/0:2,0:2:6.02:0,6,146	0/0:11,0:10:30.10:0,30,727	0/0:4,0:4:9.03:0,9,215	0/0:6,0:6:18.06:0,18,418	0/1:6,4:7:58.50:144,0,58	0/0:4,0:4:12.04:0,12,291	0/0:14,0:13:33.79:0,34,627	0/0:5,0:5:15.05:0,15,329	0/0:6,0:6:18.04:0,18,356	0/0:1,0:1:3.01:0,3,73	0/0:10,0:10:21.07:0,21,497	0/0:5,0:5:15.04:0,15,293	0/0:5,0:4:12.04:0,12,292	0/0:9,0:9:25.33:0,25,562	0/1:8,4:12:17.08:17,0,197	0/0:8,0:8:21.07:0,21,412	0/0:3,0:3:6.02:0,6,136	0/0:2,0:2:6.02:0,6,79
chr10	5355273	.	TGGGGGGCAA	T	431.66	PASS	AB=0.824;AC=4;AF=0.071;AN=56;BaseQRankSum=5.349;DP=219;FS=14.505;HRun=0;HaplotypeScore=72.7472;InbreedingCoeff=0.3333;MQ=72.60;MQ0=0;MQRankSum=-5.176;QD=13.49;ReadPosRankSum=2.369;VQSLOD=0.7070;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:11,0:11:50.77:51,0,99	0/0:2,0:2:6.02:0,6,298	0/0:3,0:4:12.04:0,12,363	0/0:10,0:9:27.09:0,27,802	0/0:4,0:4:8.55:0,9,433	0/0:5,0:5:15.04:0,15,568	0/0:10,0:10:27.06:0,27,1019	0/0:16,0:16:48.16:0,48,1905	0/0:10,0:10:30.09:0,30,1049	0/0:3,0:3:6.02:0,6,261	0/0:2,0:2:6.02:0,6,298	0/0:12,0:12:33.10:0,33,1369	0/0:7,0:7:21.07:0,21,710	0/0:10,0:10:30.10:0,30,975	1/1:6,4:7:9.01:322,9,0	0/0:4,0:4:12.04:0,12,522	0/0:15,0:15:34.31:0,34,1179	0/0:6,0:6:17.27:0,17,697	0/0:6,0:6:15.05:0,15,510	0/0:2,0:2:6.02:0,6,249	0/0:19,0:19:42.14:0,42,1660	0/0:6,0:6:18.06:0,18,657	0/0:5,0:5:15.05:0,15,703	0/0:14,0:14:40.37:0,40,1500	0/1:5,4:11:6.10:166,0,6	0/0:6,0:6:17.99:0,18,706	0/0:4,0:4:8.97:0,9,191	0/0:4,0:4:12.01:0,12,345
chr10	5355290	.	C	CGG	440.51	PASS	AB=0.571;AC=3;AF=0.054;AN=56;BaseQRankSum=5.769;DP=292;FS=16.482;HRun=0;HaplotypeScore=50.0133;InbreedingCoeff=0.5026;MQ=86.94;MQ0=0;MQRankSum=-5.069;QD=27.53;ReadPosRankSum=1.086;VQSLOD=3.4221;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:21.07:0,21,326	0/0:3,0:3:9.03:0,9,147	0/0:8,0:8:24.08:0,24,391	0/0:17,0:17:20.86:0,21,638	0/0:7,0:7:18.06:0,18,285	0/0:7,0:7:21.05:0,21,318	0/0:11,0:11:30.09:0,30,465	0/0:25,0:25:75.26:0,75,1223	0/0:10,0:10:30.10:0,30,489	0/0:6,0:6:15.05:0,15,223	0/0:2,0:2:6.02:0,6,95	0/0:21,0:21:60.19:0,60,950	0/0:12,0:12:33.11:0,33,523	0/0:9,0:9:27.06:0,27,413	1/1:0,8:8:13.32:347,13,0	0/0:4,0:4:12.04:0,12,196	0/0:15,0:15:39.13:0,39,624	0/0:9,0:9:24.08:0,24,391	0/0:7,0:7:21.02:0,21,311	0/0:3,0:3:9.03:0,9,147	0/0:25,0:25:60.18:0,60,954	0/0:9,0:9:21.07:0,21,340	0/0:7,0:7:21.07:0,21,342	0/0:23,0:23:60.19:0,60,953	0/1:2,6:8:76.46:194,0,76	0/0:8,0:8:24.08:0,24,390	0/0:6,0:6:18.05:0,18,269	0/0:6,0:6:18.06:0,18,290
chr10	5361627	.	G	GT	1081.85	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.032;DP=662;FS=11.181;HRun=6;HaplotypeScore=64.5907;InbreedingCoeff=0.9942;MQ=81.07;MQ0=0;MQRankSum=0.236;QD=29.24;ReadPosRankSum=-4.449;VQSLOD=1.6199;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,114,1162	0/0:10,0:10:30.05:0,30,299	0/0:13,0:13:33.05:0,33,326	0/0:22,0:22:21.57:0,22,367	0/0:28,0:28:81.15:0,81,813	0/0:21,0:21:51.11:0,51,520	0/0:26,0:26:66.15:0,66,673	1/1:5,32:37:96.27:1177,96,0	0/0:24,0:24:63.12:0,63,636	0/0:28,0:28:72.15:0,72,730	0/0:22,0:22:60.13:0,60,612	0/0:13,0:13:27.06:0,27,275	0/0:24,0:24:60.13:0,60,612	0/0:20,0:20:51.10:0,51,513	0/0:19,0:19:57.13:0,57,581	0/0:17,0:17:45.10:0,45,458	0/0:34,0:34:90.19:0,90,918	0/0:14,0:14:36.04:0,36,356	0/0:27,0:27:78.18:0,78,795	0/0:26,0:26:75.15:0,75,758	0/0:26,0:26:69.14:0,69,696	0/0:28,0:28:75.15:0,75,758	0/0:27,0:27:66.14:0,66,673	0/0:31,0:31:78.15:0,78,787	0/0:28,0:28:78.13:0,78,779	0/0:26,0:26:72.16:0,72,734	0/0:17,0:17:51.11:0,51,519	0/0:12,0:12:33.07:0,33,336
chr10	5362291	.	C	CA	2128.91	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=2.581;DP=626;FS=6.078;HRun=7;HaplotypeScore=86.8390;InbreedingCoeff=0.9975;MQ=62.51;MQ0=11;MQRankSum=2.932;QD=28.39;ReadPosRankSum=1.505;VQSLOD=4.1934;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:26:55.08:0,55,588	0/0:8,0:8:24.04:0,24,232	0/0:32,0:14:28.53:0,29,219	0/0:39,0:19:32.99:0,33,271	0/0:15,0:14:42.02:0,42,387	0/0:30,0:30:81.11:0,81,775	0/0:13,0:13:21.02:0,21,202	0/0:34,0:34:65.10:0,65,604	0/0:22,0:22:57.04:0,57,533	0/0:35,0:34:68.77:0,69,829	0/0:25,0:24:63.07:0,63,603	0/0:18,0:18:45.06:0,45,431	0/0:16,0:16:42.04:0,42,399	0/0:16,0:16:39.02:0,39,365	0/0:26,0:26:69.11:0,69,666	1/1:2,16:18:48.15:580,48,0	0/0:27,0:27:61.74:0,62,608	0/0:29,0:29:60.79:0,61,655	1/1:3,12:13:36.11:432,36,0	1/1:5,15:20:46.02:536,46,0	0/0:17,0:17:48.07:0,48,459	1/1:1,21:22:63.15:742,63,0	0/0:21,0:21:54:0,54,509	0/0:11,0:11:30.04:0,30,290	0/0:25,0:25:72.10:0,72,689	0/0:24,0:24:65.45:0,65,609	0/0:33,0:33:90.14:0,90,867	0/0:9,0:9:27.04:0,27,260
chr10	5362666	.	ATGGCTCG	A	4930.93	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=11.811;DP=719;FS=14.140;HRun=0;HaplotypeScore=164.4526;InbreedingCoeff=0.9955;MQ=88.89;MQ0=0;MQRankSum=-13.286;QD=57.34;ReadPosRankSum=2.198;VQSLOD=4.2598;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,38:42:81.22:1931,81,0	0/0:7,0:7:21.07:0,21,766	0/0:25,0:25:69.24:0,69,2521	0/0:32,0:32:92.80:0,93,3103	0/0:22,0:22:53.78:0,54,1903	0/0:24,0:24:69.24:0,69,2179	0/0:29,0:29:87.30:0,87,3107	0/0:37,0:37:99:0,102,3252	0/0:26,0:26:75.26:0,75,2548	0/0:32,0:32:90.29:0,90,2441	0/0:15,0:15:35.41:0,35,1242	0/0:29,0:29:78.27:0,78,2536	0/0:30,0:30:87.30:0,87,2992	0/0:33,0:33:99:0,99,3595	1/1:0,31:31:84.29:2130,84,0	0/0:29,0:29:78.27:0,78,2771	0/0:33,0:33:93.32:0,93,3589	0/0:6,0:6:18.04:0,18,611	0/0:24,0:23:63.22:0,63,2222	0/0:23,0:23:63.16:0,63,1773	0/0:47,0:47:99:0,135,4102	0/0:21,0:21:54.41:0,54,1855	0/0:24,0:24:60.21:0,60,1855	0/0:25,0:25:72.25:0,72,2694	1/1:1,12:13:36.12:870,36,0	0/0:20,0:20:57.20:0,57,1798	0/0:28,0:26:84.29:0,84,2893	0/0:12,0:12:33.11:0,33,1330
chr10	5365006	.	TA	T	990.30	PASS	AB=0.890;AC=7;AF=0.125;AN=56;BaseQRankSum=3.407;DP=630;FS=0.998;HRun=13;HaplotypeScore=78.2534;InbreedingCoeff=0.4603;MQ=71.84;MQ0=1;MQRankSum=-0.824;QD=8.92;ReadPosRankSum=2.848;VQSLOD=3.1292;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:29:65.92:0,66,617	0/0:11,2:14:4.96:0,5,192	0/1:14,2:14:32.35:32,0,34	0/1:10,1:8:14.39:14,0,62	0/0:29,1:30:50.08:0,50,623	0/0:32,0:32:69.08:0,69,656	0/1:15,3:18:14.66:15,0,352	0/0:6,0:23:45.29:0,45,252	0/0:12,1:13:11.14:0,11,270	0/0:29,1:30:40.83:0,41,530	0/0:15,0:17:44.85:0,45,407	0/0:21,3:24:14.16:0,14,299	0/0:18,2:20:10.24:0,10,406	0/0:20,0:20:32.35:0,32,378	1/1:3,28:31:74.56:546,75,0	0/0:5,0:25:15.17:0,15,154	0/0:22,2:24:32.18:0,32,474	0/0:22,0:22:54.07:0,54,519	0/0:9,0:21:32.64:0,33,203	0/0:6,0:22:49.26:0,49,288	0/0:21,0:21:51.04:0,51,478	0/0:7,0:20:28:0,28,157	0/0:20,3:23:9.98:0,10,409	0/0:18,0:18:45.06:0,45,433	1/1:5,29:34:71.52:524,72,0	0/0:7,0:24:48.40:0,48,282	0/0:12,0:40:60.09:0,60,334	0/0:4,0:7:17.50:0,17,121
chr10	5369174	.	TACACACACACACACACACACAC	T	209.08	PASS	AC=2;AF=0.037;AN=54;BaseQRankSum=2.369;DP=443;FS=0.000;HRun=0;HaplotypeScore=219.2245;InbreedingCoeff=0.4952;MQ=64.48;MQ0=14;MQRankSum=-1.937;QD=10.45;ReadPosRankSum=1.181;VQSLOD=2.1189;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/0:8,0:9:21.07:0,21,1341	0/0:28,0:19:12.04:0,12,410	0/0:20,0:13:9.39:0,9,193	0/0:31,0:30:39.13:0,39,3041	0/0:13,0:13:18.06:0,18,1398	0/0:13,0:12:9.03:0,9,517	0/0:22,0:22:21.07:0,21,543	0/0:15,0:14:18.06:0,18,1465	0/0:11,0:11:30.10:0,30,2187	0/0:11,0:11:12.04:0,12,944	0/0:24,0:22:48.16:0,48,3672	0/0:10,0:10:23.75:0,24,1775	0/0:15,0:15:27.09:0,27,2090	0/0:18,0:18:30.10:0,30,2492	0/0:14,0:14:24.07:0,24,1145	1/1:16,4:18:6.02:289,6,0	0/0:13,0:13:15.01:0,15,1086	0/0:8,0:8:6.02:0,6,414	0/0:10,0:10:3.01:0,3,88	0/0:18,0:15:15.05:0,15,1152	0/0:8,0:8:6.02:0,6,429	0/0:11,0:10:15.05:0,15,1324	0/0:26,0:24:45.07:0,45,3811	0/0:19,0:19:24.08:0,24,1899	0/0:11,0:11:23.44:0,23,958	0/0:18,0:16:30.10:0,30,2084	0/0:7,0:7:15.05:0,15,758
chr10	5369803	.	G	GAC	1499.04	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-8.573;DP=654;FS=6.223;HRun=0;HaplotypeScore=72.6820;InbreedingCoeff=0.9796;MQ=84.46;MQ0=1;MQRankSum=-3.248;QD=44.09;ReadPosRankSum=-0.361;VQSLOD=4.9780;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,108,1546	0/0:6,0:6:15.05:0,15,215	0/0:20,0:20:57.18:0,57,773	0/0:21,0:21:54.09:0,54,698	0/0:26,0:26:75.24:0,75,1055	0/0:28,0:28:84.27:0,84,1187	0/0:22,0:22:63.21:0,63,903	0/0:29,0:29:84.28:0,84,1188	0/0:30,0:30:90.30:0,90,1289	0/0:28,0:28:81.27:0,81,1161	0/0:22,0:22:54.16:0,54,738	0/0:20,0:20:57.17:0,57,780	0/0:20,0:20:57.18:0,57,800	0/0:20,0:20:60.20:0,60,860	0/0:18,0:17:51.17:0,51,731	0/0:31,0:31:90.30:0,90,1290	1/1:1,33:33:87.30:1594,87,0	0/0:9,0:9:27.09:0,27,387	0/0:24,0:24:72.21:0,72,991	0/0:23,0:23:69.23:0,69,989	0/0:24,0:24:72.24:0,72,1031	0/0:28,0:28:84.11:0,84,1111	0/0:16,0:16:48.15:0,48,669	0/0:24,0:24:66.19:0,66,919	0/0:27,0:27:78.26:0,78,1117	0/0:37,0:37:99:0,108,1548	0/0:23,0:23:69.23:0,69,989	0/0:8,0:8:21.07:0,21,301
chr10	5370099	.	GATAT	G	10545.79	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=14.676;DP=527;FS=2.939;HRun=0;HaplotypeScore=92.2228;InbreedingCoeff=0.9479;MQ=81.15;MQ0=0;MQRankSum=-3.776;QD=41.36;ReadPosRankSum=1.382;VQSLOD=4.8444;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,17:18:42.14:751,42,0	0/0:9,0:9:24.08:0,24,624	0/0:19,0:19:42.13:0,42,997	0/0:13,0:13:0.16:0,0,549	0/0:24,0:24:72.25:0,72,1864	0/0:14,0:14:36.12:0,36,927	0/0:16,0:16:42.14:0,42,984	1/1:5,17:22:51.17:876,51,0	0/0:20,0:20:51.15:0,51,1270	0/0:27,0:27:78.27:0,78,1992	0/0:20,0:20:54.16:0,54,1297	0/0:13,0:13:36.12:0,36,921	0/0:17,0:17:45.15:0,45,1169	0/0:11,0:11:30.10:0,30,765	1/1:3,36:39:90.31:1618,90,0	1/1:2,20:22:54.19:969,54,0	0/0:14,0:14:42.14:0,42,1080	0/0:10,0:10:30.10:0,30,738	1/1:3,10:13:30.02:418,30,0	1/1:5,21:26:57.19:1006,57,0	0/0:16,0:16:45.15:0,45,1159	1/1:1,24:25:66.23:1167,66,0	0/0:19,0:19:54.19:0,54,1355	0/0:10,0:10:24.08:0,24,624	1/1:4,18:22:42.14:755,42,0	1/1:3,28:31:6.23:1260,6,0	1/1:3,25:28:72.25:1294,72,0	1/1:0,9:9:24.08:431,24,0
chr10	5370489	.	T	TAC	497.69	PASS	AB=0.989;AC=24;AF=0.444;AN=54;BaseQRankSum=-0.489;DP=463;FS=5.332;HRun=0;HaplotypeScore=77.9498;InbreedingCoeff=0.3260;MQ=64.87;MQ0=4;MQRankSum=-0.582;QD=2.14;ReadPosRankSum=0.328;VQSLOD=1.2457;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:20:8.52:0,9,42	0/1:7,0:8:16.07:16,0,37	./.	0/1:31,0:25:0:0,0,0	1/1:16,0:16:6:60,6,0	0/1:13,1:14:35.15:35,0,41	0/0:9,0:10:2.84:0,3,14	1/1:21,0:21:0.89:2,1,0	0/0:19,0:19:5.87:0,6,64	0/0:12,0:12:2.55:0,3,19	0/0:6,0:6:3.46:0,3,25	0/1:11,0:11:0:0,0,0	0/0:15,0:15:2.73:0,3,12	0/0:20,0:20:11.77:0,12,93	0/0:21,0:22:2.84:0,3,14	1/1:5,7:12:6.02:88,6,0	0/0:13,0:22:7.90:0,8,60	0/0:15,0:14:4.98:0,5,44	1/1:5,2:7:6.02:88,6,0	1/1:13,6:19:2.79:44,3,0	0/0:24,0:23:3:0,3,32	1/1:19,0:19:5.99:48,6,0	0/1:17,0:17:15.78:16,0,31	0/1:30,0:29:1.17:1,0,182	0/0:8,0:10:8.32:0,8,38	1/1:15,0:15:15.48:137,15,0	1/1:8,0:8:5.91:70,6,0	1/1:5,0:5:5.97:45,6,0
chr10	5370682	.	TAC	T	189.64	PASS	AB=0.877;AC=13;AF=0.260;AN=50;BaseQRankSum=3.776;DP=494;FS=3.037;HRun=0;HaplotypeScore=78.2001;InbreedingCoeff=-0.0037;MQ=64.79;MQ0=12;MQRankSum=1.173;QD=0.94;ReadPosRankSum=0.334;VQSLOD=1.3487;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:30:6.15:29,6,0	0/0:11,0:10:14.99:0,15,173	./.	./.	0/0:23,1:23:5.82:0,6,460	0/1:19,3:21:99:117,0,198	0/0:18,0:18:27.07:0,27,380	0/0:24,0:23:20.64:0,21,185	0/0:15,0:13:21.06:0,21,288	0/0:25,0:25:34.35:0,34,463	0/1:10,1:12:26.40:26,0,156	0/1:16,1:17:3.18:3,0,339	0/1:7,1:8:12.25:12,0,216	0/1:12,1:13:12.19:12,0,248	0/0:13,0:11:6.01:0,6,69	0/0:15,0:14:2.28:0,2,6	1/1:15,3:17:6.38:42,6,0	0/1:19,1:19:3.40:3,0,313	0/0:18,0:16:22.18:0,22,153	0/0:17,0:17:6:0,6,57	0/1:18,7:24:0.35:0,0,335	./.	0/1:10,3:13:48.49:48,0,121	0/1:19,4:23:30.43:30,0,391	0/0:21,0:26:6:0,6,72	0/0:22,0:23:20.62:0,21,127	0/0:5,0:5:6.84:0,7,47	0/0:2,0:2:3.88:0,4,27
chr10	5370723	.	A	ACGCACGCAC	812.79	PASS	AB=0.594;AC=12;AF=0.214;AN=56;BaseQRankSum=8.644;DP=564;FS=0.000;HRun=0;HaplotypeScore=167.3417;InbreedingCoeff=0.4493;MQ=59.28;MQ0=5;MQRankSum=-5.059;QD=4.78;ReadPosRankSum=-1.177;VQSLOD=2.1470;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:24.06:0,24,651	0/0:15,0:15:27.09:0,27,722	0/0:16,0:9:24.08:0,24,523	0/0:20,0:15:39.13:0,39,852	0/0:25,0:24:54.18:0,54,1464	0/0:22,0:22:60.21:0,60,1582	0/0:22,0:22:57.18:0,57,1337	0/1:14,0:41:39.75:405,0,40	0/0:19,0:16:48.16:0,48,1242	0/0:29,0:29:63.21:0,63,1555	0/0:14,0:14:33.11:0,33,843	0/0:17,0:17:30.10:0,30,833	0/0:13,0:13:39.11:0,39,903	0/0:17,0:17:45.15:0,45,1218	1/1:3,1:10:3.01:107,3,0	0/0:5,0:10:6.39:0,6,39	1/1:8,0:17:9.80:91,10,0	0/0:20,0:20:50.28:0,50,1076	0/0:8,0:16:18.61:0,19,154	0/1:9,0:25:20.99:21,0,30	0/0:30,0:27:54.19:0,54,1518	0/0:6,0:18:0.36:0,1,0	0/0:17,0:17:36.12:0,36,948	0/0:24,0:23:48.16:0,48,1237	1/1:16,0:27:2.88:24,3,0	0/1:10,0:24:10.51:182,0,11	1/1:0,0:9:8.42:50,8,0	0/1:2,0:13:17.65:85,0,18
chr10	5370882	.	TACTTAATGAGACCC	T	18784	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=17.269;DP=503;FS=25.104;HRun=0;HaplotypeScore=206.9912;InbreedingCoeff=0.9900;MQ=82.95;MQ0=0;MQRankSum=-14.967;QD=113.84;ReadPosRankSum=0.381;VQSLOD=3.3258;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,8:8:24.08:1046,24,0	0/0:13,0:13:39.12:0,39,2404	0/0:22,0:22:66.23:0,66,3981	0/0:13,0:13:37.94:0,38,2173	0/0:32,0:32:96.31:0,96,6081	0/0:34,0:34:99:0,102,7080	0/0:14,0:14:42.14:0,42,3036	1/1:0,21:21:63.18:2349,63,0	0/0:16,0:16:48.16:0,48,3434	0/0:32,0:32:96.31:0,96,6305	0/0:26,0:26:75.26:0,75,5365	0/0:16,0:16:48.16:0,48,3254	0/0:24,0:24:72.24:0,72,4893	0/0:18,0:18:54.19:0,54,3868	1/1:0,15:15:39.13:1725,39,0	1/1:0,13:13:36.12:1592,36,0	0/0:21,0:21:63.22:0,63,4449	0/0:10,0:9:27.06:0,27,1608	1/1:0,14:14:39.11:1429,39,0	1/1:0,15:15:45.15:1893,45,0	0/0:7,0:7:18.06:0,18,1302	1/1:0,15:15:45.15:1984,45,0	0/0:24,0:24:72.23:0,72,4701	0/0:16,0:16:48.16:0,48,3407	1/1:0,19:19:48.16:2024,48,0	1/1:0,24:24:69.23:2630,69,0	1/1:0,14:14:39.13:1714,39,0	1/1:0,7:7:9.03:398,9,0
chr10	5371887	.	C	CTGTTTGTTTGTT	9391.52	PASS	AB=0.694;AC=12;AF=0.214;AN=56;BaseQRankSum=-2.958;DP=688;FS=10.286;HRun=0;HaplotypeScore=233.4723;InbreedingCoeff=0.4001;MQ=67.01;MQ0=0;MQRankSum=-8.270;QD=42.30;ReadPosRankSum=-4.627;VQSLOD=2.5489;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:78.25:0,78,2446	0/0:13,0:13:30.10:0,30,1054	0/0:21,0:20:30.17:0,30,616	0/0:23,0:21:11.03:0,11,668	0/0:21,0:21:63.21:0,63,1930	0/0:37,0:37:93.28:0,93,2962	0/0:26,0:26:57.05:0,57,1693	1/1:23,0:33:41.13:764,41,0	0/0:22,0:22:45.14:0,45,1500	0/0:36,0:36:90.30:0,90,2917	0/0:24,0:24:63.22:0,63,2009	0/0:13,0:13:39.13:0,39,1324	0/0:19,0:19:48.16:0,48,1678	0/0:31,0:31:63.22:0,63,2097	0/0:26,0:26:57.20:0,57,1874	0/1:14,0:25:12.46:26,0,12	0/0:21,0:21:51.16:0,51,1663	0/1:15,0:15:11.04:11,0,1079	0/1:10,0:20:10.94:44,0,11	0/1:6,0:25:16.70:98,0,17	0/0:25,0:25:48.16:0,48,1595	0/1:6,0:20:9.20:94,0,9	0/0:21,0:21:51.18:0,51,1748	0/0:30,0:30:75.20:0,75,2458	0/0:21,0:21:45.15:0,45,1581	0/1:15,14:31:39.24:2812,0,39	1/1:27,8:37:60.20:3084,60,0	1/1:1,13:15:42.14:2459,42,0
chr10	5372311	.	TCA	T	3076.37	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.951;DP=716;FS=0.449;HRun=0;HaplotypeScore=81.3718;InbreedingCoeff=0.9962;MQ=79.01;MQ0=1;MQRankSum=-0.854;QD=33.44;ReadPosRankSum=2.303;VQSLOD=6.0004;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,41:43:99:1584,108,0	0/0:9,0:9:24.08:0,24,422	0/0:15,0:14:30.15:0,30,697	0/0:20,0:19:35.35:0,35,654	0/0:33,0:33:96.33:0,96,1739	0/0:22,0:22:63.22:0,63,1150	0/0:24,0:24:66.23:0,66,1189	0/0:36,0:36:99:0,99,1765	0/0:24,0:24:72.25:0,72,1300	0/0:29,0:29:84.27:0,84,1464	0/0:31,0:31:93.32:0,93,1689	0/0:23,0:23:66.23:0,66,1204	0/0:23,0:23:63.22:0,63,1134	0/0:26,0:26:78.27:0,78,1433	1/1:1,24:25:57.19:840,57,0	0/0:33,0:33:90.29:0,90,1611	0/0:30,0:30:81.28:0,81,1471	0/0:18,0:18:48.16:0,48,886	0/0:22,0:22:63.20:0,63,1099	0/0:29,0:29:87.28:0,87,1545	0/0:23,0:23:69.24:0,69,1241	0/0:28,0:28:84.29:0,84,1519	0/0:27,0:27:69.24:0,69,1267	0/0:22,0:22:66.23:0,66,1210	1/1:0,24:23:54.18:795,54,0	0/0:30,0:30:90.31:0,90,1636	0/0:40,0:40:99:0,111,1991	0/0:7,0:7:18.06:0,18,332
chr10	5373416	.	T	TC	14412.12	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-19.315;DP=705;FS=5.530;HRun=0;HaplotypeScore=62.2527;InbreedingCoeff=0.9997;MQ=88.42;MQ0=0;MQRankSum=-3.889;QD=44.62;ReadPosRankSum=0.708;VQSLOD=5.1879;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,44:44:99:1967,123,0	0/0:9,0:9:24.08:0,24,336	0/0:31,0:31:87.17:0,87,1144	0/0:27,0:27:81.18:0,81,1019	0/0:19,0:19:57.19:0,57,797	0/0:31,0:31:90.30:0,90,1258	0/0:25,0:25:75.25:0,75,1048	1/1:0,29:29:87.26:1320,87,0	0/0:25,0:25:75.25:0,75,1046	0/0:19,0:19:54.18:0,54,754	0/0:20,0:20:57.19:0,57,794	0/0:26,0:26:75.25:0,75,1047	0/0:26,0:26:78.26:0,78,1087	0/0:28,0:28:84.28:0,84,1171	1/1:0,25:25:75.26:1199,75,0	1/1:1,30:31:48.34:1349,48,0	1/1:2,27:29:69.24:1103,69,0	0/0:24,0:24:69.19:0,69,942	1/1:0,15:15:45.15:716,45,0	1/1:1,21:22:60.20:959,60,0	0/0:22,0:22:66.22:0,66,920	1/1:1,20:21:57.19:911,57,0	0/0:18,0:18:54.17:0,54,737	0/0:32,0:32:96.32:0,96,1343	1/1:0,17:17:51.17:815,51,0	1/1:0,27:27:81.23:1243,81,0	1/1:1,41:42:99:1822,114,0	1/1:0,21:21:63.21:1007,63,0
chr10	5373900	.	C	CA	1372.47	PASS	AB=0.775;AC=8;AF=0.143;AN=56;BaseQRankSum=6.877;DP=469;FS=0.000;HRun=0;HaplotypeScore=61.2330;InbreedingCoeff=0.5995;MQ=51.52;MQ0=15;MQRankSum=0.701;QD=15.60;ReadPosRankSum=0.242;VQSLOD=5.1964;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:20:48.07:0,48,643	0/0:9,0:9:27.09:0,27,359	0/0:5,0:2:6.01:0,6,69	0/1:7,0:4:12.75:13,0,30	0/0:22,0:21:33.54:0,34,434	0/0:11,0:11:33.07:0,33,437	0/0:17,0:16:36.11:0,36,476	0/0:27,0:26:47.47:0,47,283	0/0:13,0:13:36:0,36,485	0/0:21,0:19:48.15:0,48,641	0/0:24,0:23:66.19:0,66,869	0/0:9,0:9:27.09:0,27,369	0/0:7,0:7:21.07:0,21,290	0/0:16,0:15:39.06:0,39,502	0/0:13,0:13:36.12:0,36,494	0/1:4,18:22:42.51:373,0,43	0/0:50,0:46:99:0,126,1697	0/0:22,0:21:48.16:0,48,666	1/1:7,14:20:0.52:396,1,0	1/1:3,15:18:22.96:340,23,0	0/0:9,0:8:18.05:0,18,239	1/1:2,18:19:36.05:393,36,0	0/0:13,0:13:30.06:0,30,384	0/0:11,0:11:21.07:0,21,293	0/0:10,0:10:30.10:0,30,409	0/0:22,0:21:46.04:0,46,270	0/0:16,0:15:29.26:0,29,173	0/0:13,0:13:37.76:0,38,212
chr10	5375829	.	TA	T	824.59	PASS	AB=1.000;AC=7;AF=0.130;AN=54;BaseQRankSum=7.590;DP=315;FS=3.258;HRun=8;HaplotypeScore=37.2720;InbreedingCoeff=0.7358;MQ=83.20;MQ0=3;MQRankSum=-1.048;QD=12.69;ReadPosRankSum=1.737;VQSLOD=2.2203;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:45.10:0,45,518	0/0:7,0:7:15.05:0,15,181	0/1:26,0:11:13.60:14,0,43	0/0:28,0:20:19.07:0,19,139	0/0:14,0:14:39.10:0,39,448	0/0:15,0:15:45.14:0,45,541	0/0:6,0:6:15.05:0,15,181	0/0:25,0:25:69.20:0,69,820	0/0:3,0:3:6.02:0,6,72	0/0:8,0:8:15.05:0,15,181	0/0:8,0:8:21.06:0,21,253	0/0:7,0:7:18.06:0,18,217	0/0:8,0:8:18.06:0,18,217	0/0:6,0:6:18.06:0,18,217	0/0:6,0:6:15.05:0,15,180	0/0:6,0:6:18.06:0,18,216	0/0:22,0:21:63.19:0,63,760	0/0:11,0:11:27.04:0,27,308	0/0:19,0:19:57.17:0,57,675	0/0:11,0:11:27.08:0,27,324	0/0:5,0:5:15.05:0,15,181	0/0:2,0:2:6.02:0,6,71	./.	0/0:4,0:4:8.99:0,9,92	0/0:12,0:12:33.09:0,33,387	1/1:0,10:10:30.05:289,30,0	1/1:1,20:21:54.09:521,54,0	1/1:3,5:8:15.02:145,15,0
chr10	5377086	.	T	TCAAAC	2816.42	PASS	AB=0.818;AC=19;AF=0.352;AN=54;BaseQRankSum=0.774;DP=483;FS=0.643;HRun=0;HaplotypeScore=92.1345;InbreedingCoeff=0.6881;MQ=61.91;MQ0=7;MQRankSum=-2.524;QD=14.52;ReadPosRankSum=-2.999;VQSLOD=2.4888;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:38.23:0,38,730	0/0:8,0:8:18.06:0,18,301	0/1:37,0:23:0:0,0,0	./.	0/0:12,0:12:12.04:0,12,211	0/0:17,0:17:21.07:0,21,370	0/0:7,0:7:9.02:0,9,131	0/0:26,0:24:0:0,0,0	0/0:12,0:12:30.10:0,30,520	0/0:12,0:11:18.06:0,18,279	0/0:13,0:13:18.06:0,18,316	0/0:11,0:11:21.07:0,21,354	0/0:14,0:14:33.10:0,33,522	0/0:13,0:13:12.04:0,12,212	1/1:13,8:21:9.03:249,9,0	1/1:10,0:21:21.06:456,21,0	0/1:14,16:31:27.39:792,0,27	0/0:19,0:19:21.07:0,21,350	1/1:11,0:10:9.03:174,9,0	1/1:7,0:9:6.02:139,6,0	0/0:28,0:28:42.07:0,42,644	1/1:4,0:4:6.02:144,6,0	0/0:7,0:7:9.03:0,9,159	0/0:20,0:20:30.07:0,30,449	1/1:10,3:13:9.03:249,9,0	0/1:13,2:14:9.69:408,0,10	1/1:22,0:22:12.04:259,12,0	1/1:8,0:8:9.03:129,9,0
chr10	5377130	.	A	ACCAAACCAAACCAAC	2889.14	PASS	AB=1.000;AC=10;AF=0.179;AN=56;BaseQRankSum=0.551;DP=510;FS=2.018;HRun=0;HaplotypeScore=194.1730;InbreedingCoeff=0.4549;MQ=57.71;MQ0=19;MQRankSum=-3.262;QD=25.80;ReadPosRankSum=0.495;VQSLOD=3.0141;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:36:85.73:0,86,1982	0/0:7,0:7:18.06:0,18,684	0/0:31,0:15:31.28:0,31,350	0/0:35,0:19:37.89:0,38,399	0/0:17,0:17:43.89:0,44,713	0/0:18,0:18:48.06:0,48,1072	0/0:14,0:14:18.33:0,18,445	0/0:24,0:23:50.63:0,51,472	0/0:14,0:14:42.09:0,42,1219	0/0:20,0:19:54.07:0,54,873	0/0:24,0:24:64.19:0,64,1107	0/0:13,0:13:36.06:0,36,932	0/0:18,0:18:54.01:0,54,1238	0/0:10,0:10:27.02:0,27,628	0/0:12,0:12:20.19:0,20,143	0/1:16,0:16:99:399,0,115	0/0:28,0:29:58.37:0,58,483	0/0:18,0:18:44.79:0,45,946	0/1:14,0:12:99:166,0,218	0/1:12,0:11:56.51:57,0,190	0/0:22,0:22:59.98:0,60,1436	0/1:8,0:8:99:115,0,126	0/0:9,0:9:26.89:0,27,429	0/0:11,0:11:33.09:0,33,1066	0/0:16,0:16:47.50:0,48,376	1/1:25,0:23:3.97:894,4,0	1/1:1,19:27:13.70:891,14,0	1/1:9,0:9:23.98:521,24,0
chr10	5378515	.	CAT	C	12994	PASS	AB=0.512;AC=23;AF=0.411;AN=56;BaseQRankSum=16.871;DP=765;FS=20.596;HRun=0;HaplotypeScore=97.5830;InbreedingCoeff=0.9466;MQ=86.18;MQ0=1;MQRankSum=-2.637;QD=39.98;ReadPosRankSum=2.709;VQSLOD=4.8256;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,37:37:96.33:1559,96,0	0/0:12,0:12:36.11:0,36,694	0/0:29,0:29:87.20:0,87,1466	0/0:26,0:27:71.40:0,71,1381	0/0:43,0:43:99:0,117,2241	0/0:33,0:33:99:0,99,1959	0/0:27,0:27:81.28:0,81,1610	1/1:0,40:40:99:1815,120,0	0/0:21,0:21:63.19:0,63,1202	0/0:23,0:23:66.23:0,66,1324	0/0:24,0:24:69.22:0,69,1336	0/0:34,0:34:99:0,102,1925	0/0:32,0:32:93.32:0,93,1885	0/0:28,0:28:84.25:0,84,1627	1/1:0,40:40:93.32:1513,93,0	1/1:1,31:32:23.39:1257,23,0	1/1:0,26:26:63.22:1024,63,0	0/0:17,0:17:51.09:0,51,940	1/1:0,14:14:42.10:640,42,0	1/1:0,29:29:75.26:1212,75,0	0/0:30,0:30:90.26:0,90,1700	1/1:0,29:29:60.20:973,60,0	0/0:20,0:20:60.21:0,60,1203	0/0:39,0:39:99:0,117,2310	1/1:0,18:18:42.14:682,42,0	0/1:1,20:20:4.06:762,0,4	1/1:0,30:30:72.25:1170,72,0	1/1:0,9:9:24.08:389,24,0
chr10	5378873	.	T	TTCA	70.48	PASS	AB=0.881;AC=5;AF=0.125;AN=40;BaseQRankSum=4.043;DP=254;FS=1.675;HRun=0;HaplotypeScore=53.6189;InbreedingCoeff=0.1564;MQ=36.46;MQ0=60;MQRankSum=-3.003;QD=2.43;ReadPosRankSum=1.035;VQSLOD=1.2007;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:5,0:4:12.04:0,12,212	./.	./.	0/0:24,0:24:45.14:0,45,751	0/0:20,0:20:14.17:0,14,555	0/0:9,0:9:18.06:0,18,297	0/1:8,1:4:12.98:65,0,13	0/0:14,0:12:33.09:0,33,510	0/0:14,0:14:39.12:0,39,639	0/0:15,0:13:26.98:0,27,437	0/0:16,0:14:32.99:0,33,516	0/0:11,0:9:18.04:0,18,289	0/0:10,0:10:24.08:0,24,423	./.	./.	0/1:9,1:4:2.65:3,0,52	0/0:26,0:15:20.22:0,20,533	0/1:4,1:2:46.87:65,0,47	0/0:2,0:1:3.01:0,3,53	0/0:9,0:7:9.03:0,9,153	./.	0/0:7,0:4:6.02:0,6,87	0/0:10,0:5:12.04:0,12,212	./.	0/0:6,0:3:9.03:0,9,158	./.	1/1:4,1:1:3.01:37,3,0
chr10	5382340	.	AT	A	901.28	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=6.428;DP=407;FS=0.000;HRun=9;HaplotypeScore=38.6150;InbreedingCoeff=0.9204;MQ=59.73;MQ0=3;MQRankSum=0.224;QD=19.18;ReadPosRankSum=2.749;VQSLOD=3.3591;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,17:19:51.03:467,51,0	0/0:7,0:7:18.05:0,18,208	0/0:10,0:4:8.92:0,9,74	0/0:6,0:5:5.96:0,6,56	0/0:15,0:15:45.13:0,45,514	0/0:9,0:9:24.07:0,24,277	0/0:12,0:12:30.07:0,30,335	0/0:27,0:26:63.16:0,63,707	0/0:9,0:9:27.06:0,27,301	0/0:13,0:13:27.07:0,27,305	0/0:20,0:20:48.14:0,48,554	0/0:17,0:17:42.12:0,42,482	0/0:19,0:19:51.15:0,51,586	0/0:10,0:10:24.07:0,24,276	1/1:2,9:11:24.01:220,24,0	0/0:16,0:16:42.12:0,42,485	0/0:20,0:20:60.18:0,60,692	0/0:17,0:17:45.12:0,45,509	0/0:15,0:16:47.90:0,48,509	0/0:25,0:25:69.20:0,69,790	0/0:7,0:7:18.05:0,18,208	0/0:5,0:5:12.04:0,12,138	0/0:23,0:24:63.02:0,63,706	0/0:6,0:6:15.04:0,15,173	1/1:2,15:17:39.01:357,39,0	0/0:22,0:23:69.02:0,69,759	0/0:10,0:10:30.09:0,30,346	0/0:16,0:16:39.59:0,40,451
chr10	5382478	.	TC	T	604.70	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=2.865;DP=427;FS=0.863;HRun=6;HaplotypeScore=38.6953;InbreedingCoeff=0.8413;MQ=42.70;MQ0=69;MQRankSum=-2.059;QD=18.90;ReadPosRankSum=0.095;VQSLOD=2.6244;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:21:57.19:0,57,749	0/0:5,0:4:12.04:0,12,157	0/0:7,0:5:15.04:0,15,188	0/0:10,0:6:5.84:0,6,35	0/0:12,0:12:11.87:0,12,158	0/0:12,0:9:21.07:0,21,276	0/0:20,0:14:33.06:0,33,414	0/0:20,0:11:27.09:0,27,355	0/0:12,0:9:24.08:0,24,316	0/0:11,0:9:27.09:0,27,355	0/0:6,0:5:5.98:0,6,72	0/0:27,0:17:42.14:0,42,552	0/0:20,0:12:36.03:0,36,451	0/0:7,0:5:15.05:0,15,197	0/0:18,0:13:39.11:0,39,498	0/0:18,0:11:29.60:0,30,375	0/0:21,0:14:42.04:0,42,495	0/0:17,0:11:30.08:0,30,378	0/0:8,0:2:6.02:0,6,79	0/0:13,0:13:24.08:0,24,316	0/0:29,0:17:39.09:0,39,482	0/0:14,0:14:27.09:0,27,353	0/0:14,0:14:33.10:0,33,423	0/0:24,0:12:23.95:0,24,315	0/0:11,0:11:24.04:0,24,296	1/1:2,12:12:36.09:387,36,0	1/1:4,9:11:24.06:258,24,0	1/1:0,5:3:9.02:96,9,0
chr10	5383763	.	AAG	A	4280.63	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=11.730;DP=533;FS=1.859;HRun=0;HaplotypeScore=65.7735;InbreedingCoeff=0.9938;MQ=82.30;MQ0=0;MQRankSum=-3.285;QD=40.38;ReadPosRankSum=2.222;VQSLOD=6.5860;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,19:19:51.17:751,51,0	0/0:10,0:10:30.10:0,30,551	0/0:17,0:17:47.19:0,47,838	0/0:15,0:15:40.69:0,41,714	0/0:30,0:30:90.26:0,90,1591	0/0:31,0:31:93.32:0,93,1720	0/0:13,0:13:36.12:0,36,666	0/0:32,0:32:93.31:0,93,1711	0/0:19,0:19:57.20:0,57,1059	0/0:25,0:25:75.26:0,75,1405	0/0:19,0:19:57.18:0,57,1035	0/0:13,0:13:39.13:0,39,727	0/0:15,0:15:45.15:0,45,803	0/0:14,0:14:42.14:0,42,786	0/0:24,0:24:69.21:0,69,1221	0/0:23,0:23:69.22:0,69,1261	0/0:19,0:19:54.16:0,54,973	0/0:10,0:10:27.09:0,27,501	0/0:19,0:19:48.16:0,48,900	0/0:17,0:17:48.16:0,48,899	0/0:8,0:8:21.07:0,21,393	0/0:5,0:5:15.05:0,15,270	0/0:10,0:10:30.10:0,30,552	0/0:18,0:18:54.19:0,54,1003	0/0:21,0:21:63.22:0,63,1180	1/1:0,20:20:57.19:839,57,0	1/1:1,37:38:96.32:1414,96,0	1/1:0,29:29:87.29:1277,87,0
chr10	5385894	.	A	AC	7330.20	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-14.737;DP=570;FS=1.555;HRun=0;HaplotypeScore=57.8177;InbreedingCoeff=0.9560;MQ=81.98;MQ0=0;MQRankSum=-1.353;QD=43.89;ReadPosRankSum=3.254;VQSLOD=5.3509;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:90.27:0,90,1221	0/0:10,0:10:30.10:0,30,420	0/0:29,0:27:74.94:0,75,966	0/0:23,0:21:61:0,61,769	0/0:26,0:26:69.21:0,69,934	0/0:24,0:24:69.21:0,69,947	0/0:17,0:17:48.15:0,48,656	0/0:37,0:37:99:0,105,1468	0/0:12,0:12:30.07:0,30,417	0/0:26,0:26:75.24:0,75,1033	0/0:17,0:17:48.15:0,48,657	0/0:29,0:29:84.27:0,84,1151	0/0:17,0:17:51.16:0,51,695	0/0:18,0:18:54.18:0,54,755	0/0:21,0:21:63.20:0,63,857	1/1:0,17:17:48.16:767,48,0	1/1:0,23:23:63.21:1007,63,0	0/0:10,0:10:30.10:0,30,415	1/1:0,25:25:75.26:1199,75,0	1/1:0,27:27:81.28:1294,81,0	0/0:13,0:13:36.10:0,36,484	1/1:0,21:21:51.17:815,51,0	0/0:12,0:12:36.11:0,36,485	0/0:15,0:15:42.14:0,42,587	0/0:17,0:17:51.17:0,51,713	1/1:1,14:15:0.18:581,0,0	1/1:0,25:26:72.24:1139,72,0	1/1:0,13:13:33.11:528,33,0
chr10	5386642	.	AGTTTGCCTGG	A	14341.02	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=17.704;DP=717;FS=7.849;HRun=0;HaplotypeScore=235.3479;InbreedingCoeff=0.9989;MQ=80.08;MQ0=0;MQRankSum=-15.744;QD=76.28;ReadPosRankSum=1.718;VQSLOD=3.4470;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:45.15:0,45,2152	0/0:10,0:10:30.10:0,30,1547	0/0:22,0:22:63.22:0,63,2977	0/0:21,0:21:63.22:0,63,2780	0/0:33,0:33:96.32:0,96,4737	0/0:31,0:31:90.29:0,90,4454	0/0:19,0:19:48.16:0,48,2231	1/1:3,35:38:99:2843,102,0	0/0:24,0:24:72.25:0,72,3785	0/0:38,0:38:99:0,114,5832	0/0:35,0:35:96.32:0,96,4772	0/0:28,0:28:84.27:0,84,4100	0/0:32,0:32:90.30:0,90,4267	0/0:23,0:23:60.21:0,60,3040	1/1:1,29:30:81.28:2633,81,0	0/0:26,0:26:78.26:0,78,3961	1/1:2,9:11:21.07:650,21,0	0/0:9,0:9:27.09:0,27,1294	0/0:22,0:22:60.20:0,60,2907	0/0:31,0:31:90.30:0,90,4618	0/0:35,0:35:99:0,105,5354	0/0:26,0:26:78.27:0,78,3945	0/0:22,0:22:63.21:0,63,3205	0/0:26,0:26:78.27:0,78,3995	1/1:2,27:29:66.23:2140,66,0	1/1:5,27:32:84.28:2615,84,0	1/1:5,25:30:72.25:2372,72,0	1/1:1,17:18:33.11:1087,33,0
chr10	5389703	.	CTT	C	1621.74	PASS	AB=0.716;AC=20;AF=0.357;AN=56;BaseQRankSum=5.107;DP=538;FS=3.603;HRun=17;HaplotypeScore=72.8264;InbreedingCoeff=0.6654;MQ=75.09;MQ0=1;MQRankSum=0.876;QD=6.62;ReadPosRankSum=4.599;VQSLOD=-0.0097;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,14:25:22.32:164,22,0	0/1:7,0:7:9.99:10,0,85	0/0:24,0:16:3.87:0,4,87	0/0:15,0:12:9.85:0,10,72	0/0:20,0:25:55.63:0,56,529	0/0:20,0:22:43.32:0,43,447	0/0:16,0:17:29.51:0,30,360	1/1:17,13:32:5.07:190,5,0	0/0:19,0:19:39.01:0,39,425	0/0:12,0:13:12.04:0,12,152	0/0:21,0:21:40.39:0,40,439	0/0:13,1:14:28.26:0,28,299	0/0:14,2:17:5.55:0,6,209	0/0:10,0:11:23.41:0,23,216	0/1:4,1:13:8.90:9,0,28	1/1:6,16:23:31.33:298,31,0	1/1:9,9:18:10.78:93,11,0	0/0:22,1:24:22.44:0,22,398	1/1:19,10:32:29.81:223,30,0	1/1:12,10:25:28.74:212,29,0	0/0:15,0:16:39.23:0,39,398	0/1:9,13:23:3.10:238,0,3	0/0:20,0:21:30.91:0,31,326	0/0:15,1:16:9.19:0,9,302	0/0:8,1:16:12.08:0,12,45	1/1:14,6:21:11.17:132,11,0	0/1:7,8:15:2.98:121,0,3	1/1:4,6:11:17.61:130,18,0
chr10	5390453	.	T	TG	13190.58	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-13.786;DP=744;FS=8.873;HRun=3;HaplotypeScore=70.3550;InbreedingCoeff=0.9862;MQ=73.27;MQ0=0;MQRankSum=-1.738;QD=37.80;ReadPosRankSum=0.888;VQSLOD=5.0032;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,45:48:99:1783,110,0	0/0:3,0:3:9.03:0,9,108	0/0:12,0:12:24.43:0,24,305	0/0:11,0:11:11.04:0,11,193	0/0:20,0:20:60.18:0,60,720	0/0:32,0:32:96.29:0,96,1152	0/0:27,0:27:78.23:0,78,924	1/1:2,28:30:84.25:1153,84,0	0/0:34,0:34:96.28:0,96,1140	0/0:23,0:23:69.21:0,69,828	0/0:27,0:27:81.25:0,81,972	0/0:31,0:31:64.46:0,64,1051	0/0:28,0:28:84.22:0,84,993	0/0:39,0:39:99:0,114,1344	1/1:0,27:27:78.26:1092,78,0	1/1:2,28:30:84.28:1176,84,0	1/1:2,32:34:96.32:1344,96,0	0/0:11,0:11:30.09:0,30,360	1/1:2,19:21:60.20:837,60,0	1/1:0,29:29:75.25:1049,75,0	0/0:52,0:52:99:0,150,1777	1/1:2,26:28:72.23:993,72,0	0/0:14,0:14:39.12:0,39,467	0/0:31,0:31:90.23:0,90,1063	1/1:2,26:28:72.24:1008,72,0	1/1:3,20:23:30.18:822,30,0	1/1:5,35:39:99:1470,105,0	1/1:0,11:11:33.11:462,33,0
chr10	5392051	.	G	GA	1411.72	PASS	AB=0.959;AC=12;AF=0.214;AN=56;BaseQRankSum=-6.954;DP=538;FS=2.232;HRun=11;HaplotypeScore=63.2637;InbreedingCoeff=0.5810;MQ=77.31;MQ0=0;MQRankSum=2.308;QD=10.01;ReadPosRankSum=-1.689;VQSLOD=2.5304;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:19:52.77:0,53,394	0/0:8,0:8:20.91:0,21,163	0/1:16,0:14:2.96:3,0,67	0/1:16,0:16:1.06:1,0,28	0/0:29,0:30:64.46:0,64,493	0/0:20,0:20:50.78:0,51,393	0/0:9,0:9:23.90:0,24,186	0/0:40,1:44:58.04:0,58,600	0/0:12,0:13:25.91:0,26,192	0/0:32,0:33:76.71:0,77,584	0/0:22,1:23:23.28:0,23,357	0/0:16,0:16:40.87:0,41,308	0/0:10,0:10:23.90:0,24,185	0/1:10,1:11:9.56:10,0,115	0/1:21,2:23:4.14:4,0,336	1/1:1,10:11:27.05:274,27,0	0/0:16,0:17:32.80:0,33,255	0/0:24,0:26:51.78:0,52,376	1/1:3,14:17:1.43:343,1,0	1/1:4,24:30:65.65:596,66,0	0/0:17,0:17:32.84:0,33,255	1/1:1,14:15:33.07:336,33,0	0/0:13,0:14:28.87:0,29,211	0/0:13,0:13:35.86:0,36,279	0/0:10,1:11:2.44:0,2,202	0/0:27,0:27:71.72:0,72,557	0/0:35,0:35:67.82:0,68,611	0/0:11,0:12:31.92:0,32,238
chr10	5392287	.	A	AT	457.58	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=-3.462;DP=531;FS=4.026;HRun=8;HaplotypeScore=56.8127;InbreedingCoeff=0.4595;MQ=68.66;MQ0=1;MQRankSum=0.855;QD=11.16;ReadPosRankSum=1.779;VQSLOD=2.3110;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:89.99:0,90,805	0/0:7,0:7:13.54:0,14,153	0/1:20,0:13:5.09:5,0,37	0/0:7,0:5:2.83:0,3,14	0/0:28,0:28:71.71:0,72,624	0/0:20,0:20:53.95:0,54,472	0/0:21,0:21:50.84:0,51,437	0/0:22,0:22:53.98:0,54,479	0/0:19,0:19:51.90:0,52,479	0/0:27,0:27:64.59:0,65,544	0/0:33,0:33:78.70:0,79,674	0/0:17,0:17:48.01:0,48,432	0/0:14,0:14:38.91:0,39,335	0/0:14,0:14:38.97:0,39,339	0/0:18,0:18:44.97:0,45,393	0/0:12,0:12:32.99:0,33,293	1/1:2,19:21:7.51:539,8,0	0/0:16,0:16:32.86:0,33,271	0/0:29,0:29:68.92:0,69,603	0/0:22,0:22:60.02:0,60,544	0/0:16,1:17:4.37:0,4,281	0/0:13,0:13:35.85:0,36,310	0/0:28,0:28:74.97:0,75,668	0/0:10,0:10:27.01:0,27,247	0/0:9,0:9:5.06:0,5,163	0/0:20,0:20:41.20:0,41,182	0/0:22,0:21:51.73:0,52,230	0/0:12,0:12:32.57:0,33,141
chr10	5394284	.	C	CG	602.77	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=1.130;DP=422;FS=13.529;HRun=1;HaplotypeScore=51.6371;InbreedingCoeff=0.2769;MQ=64.12;MQ0=13;MQRankSum=-1.822;QD=10.76;ReadPosRankSum=-2.350;VQSLOD=-0.3148;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:89.21:0,89,1075	0/0:9,0:9:24.02:0,24,277	0/0:17,0:10:6.65:0,7,90	0/0:16,0:10:0.24:0,0,28	0/0:21,0:20:44.92:0,45,479	0/0:14,0:14:35.66:0,36,413	0/0:16,0:15:29.92:0,30,327	1/1:4,19:22:58.70:630,59,0	0/0:13,0:13:27.05:0,27,329	0/0:13,0:13:30.06:0,30,358	0/0:23,0:23:41.94:0,42,461	0/0:6,0:6:15.04:0,15,182	0/0:9,0:8:18.01:0,18,205	0/0:9,0:9:24.01:0,24,273	0/0:15,0:15:42:0,42,467	0/0:17,0:16:36.04:0,36,413	0/0:31,0:31:76.96:0,77,905	0/0:14,0:14:14.02:0,14,317	0/0:11,0:11:30.03:0,30,345	0/0:13,0:13:32.76:0,33,383	0/0:9,0:9:21.03:0,21,250	0/0:7,0:7:8.97:0,9,96	0/0:15,0:15:32.95:0,33,403	0/0:9,0:9:27.09:0,27,347	0/0:15,0:14:38.64:0,39,365	0/1:10,0:10:25.99:26,0,37	0/1:17,0:17:19.80:58,0,20	0/1:6,0:4:8.15:8,0,30
chr10	5394285	.	G	GA	700.57	PASS	AB=0.832;AC=9;AF=0.161;AN=56;BaseQRankSum=-0.193;DP=422;FS=17.501;HRun=10;HaplotypeScore=50.6232;InbreedingCoeff=0.4291;MQ=64.27;MQ0=12;MQRankSum=-3.448;QD=7.22;ReadPosRankSum=-1.780;VQSLOD=0.0093;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:83.82:0,84,681	0/0:9,0:9:23.95:0,24,193	0/1:18,0:10:1.31:1,0,71	0/0:17,0:10:3.27:0,3,43	0/0:21,0:21:31.92:0,32,246	0/0:14,0:14:29.96:0,30,246	0/0:16,0:15:26.91:0,27,215	1/1:23,0:23:26.40:259,26,0	0/0:14,0:14:26.93:0,27,218	0/0:13,0:13:26.92:0,27,221	0/0:24,0:24:32.85:0,33,265	0/0:6,0:6:11.97:0,12,99	0/1:9,0:8:5.31:5,0,105	0/0:9,0:9:17.97:0,18,148	0/0:15,0:15:29.96:0,30,246	0/0:11,0:12:29:0,29,228	0/0:30,0:31:60.82:0,61,512	0/0:14,0:14:28.91:0,29,216	0/0:10,0:10:29.01:0,29,227	0/1:12,1:13:5.02:5,0,170	0/0:9,0:9:17.97:0,18,147	0/0:6,0:6:8.81:0,9,68	0/0:15,0:15:29.72:0,30,246	0/0:9,0:9:26.97:0,27,222	0/0:15,0:15:22.98:0,23,178	0/1:2,6:9:3.75:153,0,4	1/1:3,14:18:32.92:334,33,0	0/1:3,3:4:12.61:84,0,13
chr10	5394469	.	G	GGA	763.73	PASS	AB=1.000;AC=7;AF=0.130;AN=54;BaseQRankSum=-2.476;DP=348;FS=7.489;HRun=0;HaplotypeScore=50.2653;InbreedingCoeff=0.5590;MQ=78.11;MQ0=0;MQRankSum=0.769;QD=15.27;ReadPosRankSum=3.288;VQSLOD=2.3973;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:12,0:12:42.75:43,0,71	0/0:13,0:13:39.10:0,39,570	0/0:20,0:18:42.09:0,42,548	0/0:12,0:11:17.92:0,18,168	0/0:14,0:14:39.12:0,39,574	0/0:14,0:14:42.14:0,42,641	0/0:13,0:13:39.08:0,39,564	0/0:8,0:8:5.84:0,6,41	0/0:12,0:12:33.08:0,33,461	0/0:14,0:14:36.11:0,36,513	0/0:23,0:23:66.21:0,66,972	0/0:14,0:14:39.13:0,39,593	0/0:18,0:18:51.17:0,51,778	0/0:16,0:16:48.11:0,48,687	1/1:12,0:12:1.82:5,2,0	0/0:5,0:5:11.97:0,12,99	1/1:0,22:22:45.15:793,45,0	0/0:13,0:13:39.04:0,39,524	0/0:10,0:9:20.85:0,21,161	0/0:5,0:5:2.96:0,3,19	0/0:15,0:15:41.93:0,42,557	0/0:5,0:5:4.53:0,5,25	0/0:19,0:19:51.17:0,51,773	0/0:24,0:24:72.22:0,72,1053	1/1:4,0:4:5.96:45,6,0	0/0:4,0:4:5.93:0,6,63	0/0:6,0:6:5.59:0,6,28	./.
chr10	5395679	.	GTATA	G	146.16	PASS	AB=0.956;AC=5;AF=0.227;AN=22;BaseQRankSum=-0.079;DP=120;FS=2.813;HRun=0;HaplotypeScore=28.1676;InbreedingCoeff=0.1573;MQ=79.89;MQ0=1;MQRankSum=0.475;QD=2.56;ReadPosRankSum=0.158;VQSLOD=0.8253;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/0:2,0:2:3.01:0,3,71	./.	0/1:16,0:9:0.01:0,0,0	0/0:2,2:4:0.89:0,1,2	./.	./.	0/1:24,0:24:0:0,0,0	./.	./.	./.	./.	0/0:3,0:3:2.56:0,3,51	0/0:1,0:1:3.01:0,3,38	./.	./.	0/1:11,2:13:99:149,0,111	0/0:7,0:8:2.74:0,3,12	./.	./.	./.	./.	./.	./.	1/1:3,0:4:6.01:75,6,0	0/0:6,0:6:3:0,3,27	0/0:4,0:4:3:0,3,25	./.
chr10	5397741	.	A	AT	5958.28	PASS	AB=0.727;AC=23;AF=0.411;AN=56;BaseQRankSum=18.182;DP=534;FS=8.994;HRun=1;HaplotypeScore=105.6238;InbreedingCoeff=0.9380;MQ=84.14;MQ0=0;MQRankSum=-7.461;QD=24.52;ReadPosRankSum=3.188;VQSLOD=4.1998;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,8:23:55.78:486,56,0	0/0:10,0:10:30.10:0,30,419	0/0:24,0:24:67.76:0,68,882	0/0:12,0:12:36.09:0,36,454	0/0:28,0:28:78.22:0,78,1025	0/0:24,0:24:69.21:0,69,929	0/0:20,0:20:57.15:0,57,733	1/1:2,18:20:56.20:396,56,0	0/0:19,0:19:57.17:0,57,765	0/0:24,0:24:72.23:0,72,979	0/0:17,0:17:48.15:0,48,651	0/0:25,0:25:75.23:0,75,1017	0/0:18,0:18:54.16:0,54,719	0/0:15,0:15:45.15:0,45,625	1/1:17,9:26:76.76:688,77,0	1/1:18,7:25:74.15:706,74,0	1/1:8,3:11:29.87:319,30,0	0/0:9,0:9:27.08:0,27,360	1/1:7,6:13:35.43:331,35,0	1/1:21,9:30:80.26:769,80,0	0/0:11,0:11:33.11:0,33,458	1/1:10,7:17:36.54:391,37,0	0/0:16,0:16:48.10:0,48,616	0/0:19,0:19:57.16:0,57,745	1/1:18,5:23:65.16:653,65,0	0/1:15,9:24:6.86:481,0,7	1/1:13,10:23:56.79:492,57,0	1/1:7,1:8:21.06:247,21,0
chr10	5397746	.	CT	C	5992.03	PASS	AB=0.722;AC=23;AF=0.411;AN=56;BaseQRankSum=17.993;DP=523;FS=0.000;HRun=1;HaplotypeScore=104.2911;InbreedingCoeff=0.9250;MQ=83.97;MQ0=0;MQRankSum=-6.124;QD=24.16;ReadPosRankSum=0.947;VQSLOD=4.7199;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,8:22:54.66:452,55,0	0/0:10,0:10:30.10:0,30,475	0/0:22,1:23:46.67:0,47,940	0/0:12,0:12:35.97:0,36,515	0/0:24,0:24:66.21:0,66,1029	0/0:22,0:22:63.20:0,63,978	0/0:17,0:17:51.17:0,51,810	1/1:0,22:22:64.43:453,64,0	0/0:19,0:19:57.18:0,57,883	0/0:23,0:23:69.24:0,69,1097	0/0:17,0:17:48.16:0,48,745	0/0:24,0:24:72.25:0,72,1149	0/0:16,0:16:48.16:0,48,767	0/0:15,0:15:45.15:0,45,717	1/1:17,9:26:75.17:660,75,0	1/1:17,7:24:67.86:609,68,0	1/1:7,3:10:26.65:256,27,0	0/0:8,0:8:24.08:0,24,376	1/1:8,6:14:37.67:329,38,0	1/1:24,9:33:97.30:914,97,0	0/0:12,0:12:36.12:0,36,570	1/1:10,6:16:33.41:369,33,0	0/0:17,0:17:51.15:0,51,762	0/0:16,0:16:48.16:0,48,767	1/1:18,5:23:67.55:640,68,0	0/1:16,10:26:35.66:554,0,36	1/1:13,11:24:64.43:542,64,0	1/1:8,0:8:21.03:215,21,0
chr10	5397828	.	G	GA	332.34	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.954;DP=594;FS=3.810;HRun=6;HaplotypeScore=72.4888;InbreedingCoeff=0.9788;MQ=76.62;MQ0=0;MQRankSum=-0.197;QD=22.16;ReadPosRankSum=-0.608;VQSLOD=2.7254;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:51.12:0,51,520	0/0:9,0:9:27.06:0,27,275	0/0:12,0:12:18.54:0,19,229	0/0:14,0:13:18.26:0,18,204	0/0:48,0:48:99:0,126,1285	0/0:22,0:22:57.12:0,57,581	0/0:16,0:16:48.11:0,48,490	0/0:42,0:42:99:0,111,1119	0/0:25,0:25:63.14:0,63,643	0/0:28,0:28:75.16:0,75,761	0/0:21,0:21:60.10:0,60,598	0/0:17,0:17:38.93:0,39,397	0/0:16,0:16:36.08:0,36,367	0/0:16,0:16:48.11:0,48,490	0/0:27,0:27:81.18:0,81,826	0/0:23,0:23:69.16:0,69,704	1/1:3,12:15:35.90:427,36,0	0/0:7,0:7:21.05:0,21,214	0/0:20,0:20:51.11:0,51,520	0/0:44,0:44:99:0,108,1095	0/0:12,0:12:33.07:0,33,337	0/0:23,0:23:69.16:0,69,703	0/0:21,0:21:60.13:0,60,612	0/0:12,0:12:36.08:0,36,367	0/0:20,0:20:54.12:0,54,550	0/0:22,0:22:57.13:0,57,582	0/0:35,0:35:96.21:0,96,979	0/0:9,0:9:27.06:0,27,275
chr10	5399120	.	CGTGTCTTTCATCAG	C	12200.16	PASS	AB=0.581;AC=21;AF=0.375;AN=56;BaseQRankSum=14.514;DP=487;FS=1.899;HRun=0;HaplotypeScore=197.3866;InbreedingCoeff=0.8935;MQ=84.01;MQ0=0;MQRankSum=-14.695;QD=82.99;ReadPosRankSum=2.023;VQSLOD=4.9344;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,22:30:57.20:2367,57,0	0/0:9,0:9:27.09:0,27,1898	0/0:23,0:23:66.23:0,66,3995	0/0:12,0:12:33.11:0,33,2146	0/0:10,0:10:30.10:0,30,2088	0/0:18,0:18:51.16:0,51,3403	0/0:29,0:29:84.29:0,84,5634	1/1:7,11:18:30.10:1279,30,0	0/0:19,0:19:54.19:0,54,3598	0/0:9,0:9:27.09:0,27,1706	0/0:4,0:4:12.04:0,12,848	0/0:30,0:30:90.30:0,90,5759	0/0:21,0:21:63.20:0,63,4065	0/0:26,0:26:72.19:0,72,4170	1/1:3,13:16:30.10:1258,30,0	1/1:4,9:13:24.08:1021,24,0	0/0:36,0:36:99:0,102,6313	0/0:15,0:15:45.15:0,45,3100	1/1:2,9:11:27.09:911,27,0	1/1:2,2:4:6.02:256,6,0	0/0:25,0:25:72.25:0,72,4970	1/1:1,8:9:18.06:760,18,0	0/0:6,0:6:15.05:0,15,941	0/0:48,0:48:99:0,141,9092	1/1:3,6:9:18.06:762,18,0	0/1:5,13:18:99:1413,0,173	1/1:2,13:15:39.13:1662,39,0	1/1:0,4:4:12.04:512,12,0
chr10	5399251	.	AT	A	2503.65	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=9.809;DP=615;FS=10.507;HRun=8;HaplotypeScore=62.4976;InbreedingCoeff=0.9930;MQ=84.18;MQ0=0;MQRankSum=-1.736;QD=22.16;ReadPosRankSum=3.380;VQSLOD=3.7519;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,36:42:93.14:897,93,0	0/0:15,0:15:42.13:0,42,505	0/0:16,0:16:30.08:0,30,352	0/0:25,0:25:56.98:0,57,638	0/0:15,0:15:39.12:0,39,470	0/0:12,0:12:33.09:0,33,388	0/0:40,0:40:99:0,120,1395	0/0:20,0:20:51.08:0,51,569	0/0:21,0:21:63.14:0,63,707	0/0:22,0:22:60.17:0,60,709	0/0:7,0:7:15.04:0,15,178	0/0:30,0:30:78.23:0,78,929	0/0:21,0:21:54.17:0,54,652	0/0:23,0:23:66.17:0,66,764	1/1:1,21:22:60.10:579,60,0	0/0:19,0:19:54.08:0,54,611	1/1:3,28:31:72.11:695,72,0	0/0:17,0:17:45.12:0,45,530	0/0:21,0:21:54.09:0,54,601	0/0:19,0:19:57.16:0,57,677	0/0:40,1:42:85.18:0,85,1243	0/0:12,0:12:33.09:0,33,387	0/0:18,0:18:48.12:0,48,554	0/0:40,0:41:99:0,114,1279	1/1:1,17:18:51.08:492,51,0	0/0:14,0:14:36.09:0,36,419	0/0:25,1:26:37.13:0,37,661	0/0:6,0:6:18.06:0,18,217
chr10	5400809	.	T	TATTTACA	2749.49	PASS	AB=0.545;AC=9;AF=0.161;AN=56;BaseQRankSum=8.947;DP=644;FS=9.190;HRun=0;HaplotypeScore=166.9146;InbreedingCoeff=0.8463;MQ=72.81;MQ0=0;MQRankSum=-8.688;QD=83.32;ReadPosRankSum=3.300;VQSLOD=4.3020;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,10:10:18.06:635,18,0	0/0:12,0:12:36.12:0,36,960	0/0:26,0:25:63.20:0,63,1583	0/0:26,0:25:72.24:0,72,1796	0/0:25,0:25:72.23:0,72,1819	0/0:31,0:31:87.25:0,87,2215	0/0:25,0:25:72.25:0,72,1943	0/0:34,0:34:99:0,99,2459	0/0:19,0:19:57.17:0,57,1441	0/0:32,0:32:90.31:0,90,2478	0/0:25,0:25:75.23:0,75,1947	0/0:23,0:23:69.22:0,69,1826	0/0:31,0:31:93.32:0,93,2471	0/0:16,0:16:48.16:0,48,1342	0/0:31,0:31:93.31:0,93,2528	0/1:1,5:6:65.83:510,0,66	0/0:27,0:27:78.27:0,78,2015	0/0:24,0:24:69.20:0,69,1751	1/1:0,3:3:9.03:325,9,0	1/1:0,6:6:18.06:636,18,0	0/0:46,0:45:99:0,135,3629	1/1:0,7:8:24.08:804,24,0	0/0:21,0:21:63.20:0,63,1631	0/0:37,0:37:99:0,108,2781	0/0:23,0:23:63.22:0,63,1724	0/0:24,0:24:69.23:0,69,1823	0/0:27,0:27:78.24:0,78,2017	0/0:26,0:26:75.26:0,75,2031
chr10	5400810	.	G	GGTTGTTATCA	5973.48	PASS	AB=0.706;AC=9;AF=0.161;AN=56;BaseQRankSum=11.239;DP=684;FS=2.664;HRun=0;HaplotypeScore=215.3175;InbreedingCoeff=0.8626;MQ=70.53;MQ0=1;MQRankSum=-10.999;QD=72.85;ReadPosRankSum=2.733;VQSLOD=4.8371;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,10:16:27.05:1141,27,0	0/0:12,0:12:36.12:0,36,1154	0/0:28,0:27:66.21:0,66,1926	0/0:27,0:25:70.10:0,70,2023	0/0:25,0:25:72.25:0,72,2299	0/0:29,0:29:87.25:0,87,2704	0/0:25,0:25:72.25:0,72,2434	0/0:33,0:33:96.30:0,96,2842	0/0:18,0:18:54.19:0,54,1719	0/0:30,0:30:90.30:0,90,2874	0/0:26,0:26:75.26:0,75,2385	0/0:23,0:23:69.24:0,69,2236	0/0:31,0:31:93.31:0,93,3031	0/0:16,0:16:48.16:0,48,1654	0/0:30,0:30:90.31:0,90,3084	0/1:7,5:7:58.80:844,0,59	0/0:26,0:27:49.83:0,50,2350	0/0:23,0:23:66.20:0,66,2083	1/1:3,3:5:15.05:706,15,0	1/1:12,6:17:27.09:1170,27,0	0/0:45,0:44:99:0,132,4359	1/1:18,6:23:48.16:2113,48,0	0/0:21,0:21:63.22:0,63,2058	0/0:35,0:35:99:0,102,3363	0/0:23,0:23:69.21:0,69,2227	0/0:24,0:24:69.23:0,69,2283	0/0:25,0:25:75.24:0,75,2410	0/0:26,0:26:78.25:0,78,2550
chr10	5400818	.	TA	T	1432.12	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=9.869;DP=714;FS=0.000;HRun=3;HaplotypeScore=98.5477;InbreedingCoeff=0.9903;MQ=67.48;MQ0=1;MQRankSum=-10.311;QD=16.46;ReadPosRankSum=1.118;VQSLOD=3.2717;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,20:16:15.04:184,15,0	0/0:11,0:11:33.06:0,33,433	0/0:33,0:28:71.42:0,71,1040	0/0:29,0:23:69.22:0,69,961	0/0:34,0:34:99:0,102,1461	0/0:29,0:29:84.27:0,84,1192	0/0:30,0:30:84.23:0,84,1168	0/0:34,0:32:90.30:0,90,1280	0/0:20,0:20:54.12:0,54,737	0/0:26,0:26:78.26:0,78,1117	0/0:27,0:27:81.27:0,81,1164	0/0:24,0:24:69.23:0,69,992	0/0:29,0:29:87.28:0,87,1233	0/0:17,0:17:51.17:0,51,734	0/0:29,0:29:87.29:0,87,1252	1/1:0,11:6:18:203,18,0	0/0:22,0:22:63.21:0,63,904	0/0:21,1:22:63.21:0,63,907	1/1:0,7:5:15.05:185,15,0	1/1:0,19:18:26.95:310,27,0	0/0:46,0:45:99:0,135,1852	1/1:0,30:27:60.15:722,60,0	0/0:24,0:24:66.17:0,66,908	0/0:35,0:35:99:0,102,1385	0/0:26,0:26:78.25:0,78,1105	0/0:30,0:30:87.26:0,87,1203	0/0:24,0:24:69.21:0,69,964	0/0:26,0:26:78.26:0,78,1123
chr10	5401016	.	TAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG	T	1376.44	PASS	AB=1.000;AC=11;AF=0.204;AN=54;BaseQRankSum=4.623;DP=472;FS=2.047;HRun=0;HaplotypeScore=306.1494;InbreedingCoeff=0.6401;MQ=52.95;MQ0=24;MQRankSum=-3.169;QD=13.63;ReadPosRankSum=0.926;VQSLOD=2.2135;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:19:0:0,0,0	0/0:4,0:3:3.01:0,3,438	0/0:34,0:12:6.02:0,6,136	0/0:32,0:14:9.92:0,10,205	0/0:19,0:18:30.10:0,30,2691	0/0:22,0:22:36.59:0,37,3345	0/0:19,0:19:25.80:0,26,2644	0/0:24,0:15:24.34:0,24,572	0/0:13,0:13:21.07:0,21,1288	0/0:16,0:16:15.05:0,15,1453	0/0:12,0:9:18.06:0,18,1688	0/0:14,0:14:15.52:0,16,1183	0/0:11,0:11:18.06:0,18,1519	0/0:11,0:11:18.02:0,18,1730	0/0:18,0:18:33.11:0,33,2484	1/1:10,0:10:3.01:237,3,0	0/0:24,0:23:39.06:0,39,2680	0/0:11,0:10:12.04:0,12,948	./.	1/1:13,0:15:2.13:236,2,0	0/0:20,0:20:42.14:0,42,4070	1/1:13,0:14:3.01:237,3,0	0/0:8,0:8:12.04:0,12,1066	0/0:20,0:19:24.08:0,24,3312	0/0:16,0:15:12.04:0,12,1128	1/1:18,0:15:2.98:23,3,0	1/1:9,7:14:8.47:773,8,0	0/0:11,0:11:3.01:0,3,54
chr10	5401103	.	AG	A	338.38	PASS	AB=0.804;AC=2;AF=0.036;AN=56;BaseQRankSum=5.525;DP=575;FS=5.079;HRun=2;HaplotypeScore=78.2473;InbreedingCoeff=-0.0400;MQ=56.40;MQ0=16;MQRankSum=-5.597;QD=5.94;ReadPosRankSum=-0.777;VQSLOD=0.3962;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:29:72.25:0,72,1146	0/0:15,0:14:42.13:0,42,647	0/0:14,0:5:9.92:0,10,131	0/0:20,0:7:12.51:0,13,171	0/0:28,1:29:36.37:0,36,1129	0/0:20,0:20:60.20:0,60,959	0/1:18,4:21:65.36:65,0,752	0/1:24,11:33:99:362,0,909	0/0:9,0:9:27.09:0,27,427	0/0:26,1:26:36.72:0,37,1130	0/0:20,0:20:57.19:0,57,909	0/0:12,0:12:36.12:0,36,575	0/0:16,0:16:48.15:0,48,740	0/0:18,0:18:51.17:0,51,811	0/0:18,1:18:54.16:0,54,836	0/0:14,0:13:36.12:0,36,573	0/0:34,0:34:96.33:0,96,1510	0/0:14,0:14:39.09:0,39,595	0/0:13,0:8:24.05:0,24,358	0/0:28,0:28:81.23:0,81,1224	0/0:20,0:20:60.20:0,60,947	0/0:28,0:26:54.14:0,54,806	0/0:16,0:16:48.16:0,48,756	0/0:22,0:22:66.22:0,66,1049	0/0:21,0:21:63.20:0,63,981	0/0:22,2:23:27.40:0,27,1011	0/0:23,0:23:60.19:0,60,924	0/0:11,0:11:33.11:0,33,527
chr10	5402681	.	CA	C	738.46	PASS	AB=0.862;AC=16;AF=0.286;AN=56;BaseQRankSum=8.221;DP=581;FS=5.322;HRun=14;HaplotypeScore=81.2649;InbreedingCoeff=0.2622;MQ=54.93;MQ0=3;MQRankSum=-0.267;QD=3.16;ReadPosRankSum=3.898;VQSLOD=0.2827;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:11,19:33:15.86:372,16,0	0/0:8,0:8:14.99:0,15,132	0/1:22,0:10:10.08:34,0,10	0/0:13,1:8:3.04:0,3,71	0/0:32,0:29:19.79:0,20,444	0/1:13,3:16:8.20:8,0,197	0/1:7,1:10:16.23:16,0,67	0/0:29,1:32:32.95:0,33,400	0/0:22,1:24:18.10:0,18,332	0/0:21,0:22:20.85:0,21,179	0/1:16,3:19:29.55:30,0,212	0/1:19,1:19:4.95:5,0,225	0/1:16,1:18:25.35:25,0,177	0/0:18,1:19:8.77:0,9,201	1/1:31,0:31:35.89:95,36,0	0/0:34,2:36:5.83:0,6,580	1/1:7,14:22:37.65:252,38,0	0/0:10,0:10:20.52:0,21,191	0/1:11,2:13:18.27:18,0,132	0/0:21,1:22:17.55:0,18,316	0/1:2,1:3:14.58:15,0,21	0/0:16,1:17:6.38:0,6,182	0/0:20,2:22:6.38:0,6,305	0/0:7,0:7:14.98:0,15,129	1/1:20,0:18:16.27:43,16,0	0/0:26,0:28:46.05:0,46,388	0/0:26,1:27:27.13:0,27,349	0/0:20,1:21:21.30:0,21,320
chr10	5402691	.	AAAAAG	A	1331.45	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=4.137;DP=577;FS=3.473;HRun=0;HaplotypeScore=114.1650;InbreedingCoeff=0.9278;MQ=54.85;MQ0=3;MQRankSum=-2.868;QD=26.11;ReadPosRankSum=4.516;VQSLOD=3.2811;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:87.22:0,87,1400	0/0:8,0:8:23.97:0,24,467	0/0:19,0:6:14.99:0,15,194	0/0:14,0:8:16.27:0,16,280	0/0:29,0:26:72.14:0,72,1619	0/0:14,0:14:36.11:0,36,813	0/0:11,0:11:24.01:0,24,411	0/0:34,0:31:75.62:0,76,1595	0/0:22,0:22:63.59:0,64,1320	0/0:22,0:21:42.13:0,42,924	0/0:23,0:22:54.18:0,54,1180	0/0:18,0:18:42.58:0,43,936	0/0:16,0:16:38.51:0,39,808	0/0:24,0:24:53.95:0,54,1009	1/1:4,28:32:60.10:1020,60,0	0/0:37,0:37:99:0,99,2228	0/0:24,0:22:48.13:0,48,746	0/0:9,0:9:19.02:0,19,581	0/0:20,0:17:44.93:0,45,684	0/0:26,0:24:63.11:0,63,1289	0/0:2,0:2:6.02:0,6,111	0/0:14,0:14:30.05:0,30,688	0/0:24,0:24:56.91:0,57,1266	0/0:9,0:9:21.06:0,21,487	1/1:3,16:17:27:433,27,0	0/0:29,0:29:75.13:0,75,1529	0/0:25,0:24:57.13:0,57,1266	0/0:19,0:19:45.11:0,45,1115
chr10	5403342	.	AAG	A	5374.14	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=14.459;DP=852;FS=1.580;HRun=0;HaplotypeScore=89.8161;InbreedingCoeff=0.9887;MQ=56.62;MQ0=21;MQRankSum=0.588;QD=32.97;ReadPosRankSum=1.881;VQSLOD=7.1545;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,49:50:99:1638,117,0	0/0:16,0:16:45.14:0,45,780	0/0:24,0:9:24.05:0,24,368	0/0:20,0:4:12:0,12,182	0/0:32,0:32:90.31:0,90,1602	0/0:24,0:24:69.24:0,69,1237	0/0:29,0:29:81.26:0,81,1422	0/0:24,0:23:69.24:0,69,1242	0/0:29,0:29:81.28:0,81,1442	0/0:26,0:26:75.24:0,75,1299	0/0:22,0:22:57.18:0,57,999	0/0:38,0:38:99:0,99,1753	0/0:41,0:41:99:0,120,2075	0/0:38,0:38:99:0,114,2042	0/0:38,0:37:99:0,111,1986	1/1:0,37:37:93.31:1303,93,0	0/0:35,0:33:96.33:0,96,1719	0/0:28,0:28:72.20:0,72,1246	1/1:8,16:21:48.16:672,48,0	1/1:1,28:29:75.16:1006,75,0	0/0:56,0:56:99:0,141,2523	1/1:1,19:20:54.18:755,54,0	0/0:16,0:16:42.14:0,42,756	0/0:38,0:38:99:0,108,1927	0/0:39,0:39:99:0,114,2044	0/0:38,0:38:99:0,102,1830	0/0:31,0:31:90.31:0,90,1610	0/0:7,0:6:15.05:0,15,265
chr10	5403675	.	AAGGAGCTGGAGACATGAAGACTTCCTTGAC	A	927.41	PASS	AC=10;AF=0.263;AN=38;BaseQRankSum=0.156;DP=687;FS=1.099;HRun=0;HaplotypeScore=489.4717;InbreedingCoeff=0.8919;MQ=62.29;MQ0=2;MQRankSum=1.393;QD=7.25;ReadPosRankSum=3.808;VQSLOD=0.6324;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	0/0:10,0:10:15.05:0,15,687	./.	./.	0/0:31,0:30:36.11:0,36,2133	0/0:29,0:29:18.06:0,18,1527	0/0:32,0:32:21.07:0,21,785	./.	0/0:28,0:28:24.05:0,24,1621	0/0:35,0:35:27.09:0,27,2472	0/0:21,0:21:21.07:0,21,1317	0/0:30,0:30:39.13:0,39,3448	0/0:18,0:18:24.08:0,24,2805	0/0:24,0:24:21.07:0,21,1709	1/1:25,0:25:9.03:198,9,0	./.	1/1:25,0:25:6.02:140,6,0	0/0:23,0:23:18.06:0,18,1208	./.	./.	0/0:34,0:34:33.11:0,33,3051	./.	0/0:24,0:24:24.08:0,24,1517	0/0:31,0:31:36.11:0,36,2349	1/1:16,0:16:9.01:171,9,0	1/1:26,5:31:8.13:250,8,0	1/1:31,0:31:9.02:309,9,0	./.
chr10	5403818	.	C	CT	2429.70	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-11.286;DP=805;FS=0.487;HRun=3;HaplotypeScore=93.8477;InbreedingCoeff=0.9958;MQ=61.28;MQ0=2;MQRankSum=3.455;QD=35.73;ReadPosRankSum=2.884;VQSLOD=3.9610;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,129,1511	0/0:9,0:9:18.05:0,18,216	0/0:22,0:20:47.89:0,48,544	0/0:23,0:21:48.09:0,48,550	0/0:29,0:29:78.23:0,78,924	0/0:30,0:29:87.27:0,87,1044	0/0:30,0:30:90.23:0,90,1044	0/0:41,0:40:99:0,105,1220	0/0:24,0:24:72.20:0,72,851	0/0:37,0:37:99:0,105,1244	0/0:19,0:19:54.15:0,54,636	0/0:31,0:31:93.26:0,93,1093	0/0:28,0:28:78.21:0,78,910	0/0:25,0:25:72.22:0,72,863	1/1:1,32:33:90.30:1260,90,0	0/0:35,0:35:99:0,102,1180	0/0:24,0:24:66.05:0,66,776	0/0:25,0:25:66.18:0,66,778	0/0:29,0:29:81.24:0,81,962	0/0:30,0:30:81.25:0,81,971	0/0:41,0:41:99:0,117,1330	0/0:16,0:16:42.13:0,42,504	0/0:21,0:21:54.15:0,54,638	0/0:40,0:40:99:0,111,1296	1/1:1,34:35:93.31:1291,93,0	0/0:34,0:34:99:0,99,1178	0/0:30,0:30:84.22:0,84,973	0/0:16,0:16:48.15:0,48,575
chr10	5404588	.	A	AT	5485.65	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-13.153;DP=567;FS=1.138;HRun=3;HaplotypeScore=52.7078;InbreedingCoeff=0.9555;MQ=75.61;MQ0=0;MQRankSum=-0.691;QD=32.08;ReadPosRankSum=0.605;VQSLOD=4.6860;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:69.14:0,69,786	0/0:6,0:6:18.02:0,18,191	0/0:15,0:13:5.33:0,5,164	0/0:17,0:13:5.17:0,5,188	0/0:22,0:22:66.13:0,66,733	0/0:17,0:17:51.06:0,51,535	0/0:16,0:16:45.13:0,45,525	1/1:2,41:43:99:1444,123,0	0/0:18,0:18:48.11:0,48,542	0/0:19,0:19:57.09:0,57,631	0/0:15,0:15:44.89:0,45,482	0/0:23,0:23:69.14:0,69,766	0/0:26,0:26:69.19:0,69,809	0/0:24,0:24:66.17:0,66,753	1/1:2,20:22:45.15:599,45,0	0/0:18,0:18:54.17:0,54,642	1/1:2,18:20:48.16:639,48,0	0/0:17,0:17:48.10:0,48,537	0/0:22,0:22:63.09:0,63,671	0/0:25,0:25:75.14:0,75,817	0/0:9,0:9:27.06:0,27,303	0/0:16,0:16:45.01:0,45,493	0/0:19,0:19:54.11:0,54,600	0/0:27,0:27:78.63:0,79,871	1/1:0,21:21:45.15:599,45,0	1/1:0,20:20:57.63:729,58,0	1/1:1,30:31:72.22:957,72,0	1/1:0,14:14:39.13:519,39,0
chr10	5406233	.	CA	C	1732.04	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.353;DP=745;FS=5.934;HRun=4;HaplotypeScore=74.4283;InbreedingCoeff=0.9978;MQ=69.23;MQ0=1;MQRankSum=-1.510;QD=30.93;ReadPosRankSum=2.635;VQSLOD=4.2870;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,126,1745	0/0:12,0:12:36.09:0,36,454	0/0:28,0:27:63.94:0,64,801	0/0:26,0:25:65.90:0,66,896	0/0:43,0:43:99:0,123,1686	0/0:31,0:31:90.28:0,90,1227	0/0:25,0:25:75.22:0,75,1014	0/0:28,0:28:78.18:0,78,1047	0/0:28,0:28:81.26:0,81,1117	0/0:28,0:28:81.27:0,81,1134	0/0:26,0:26:72.23:0,72,975	0/0:28,0:28:84.27:0,84,1159	0/0:23,0:23:66.22:0,66,922	0/0:31,0:31:90.28:0,90,1227	1/1:1,29:30:84.19:990,84,0	0/0:31,0:31:93.31:0,93,1301	0/0:30,0:30:87.23:0,87,1178	0/0:16,0:16:45.15:0,45,627	0/0:30,0:30:90.29:0,90,1244	0/0:32,0:32:90.29:0,90,1235	0/0:33,0:33:96.29:0,96,1303	0/0:16,0:16:48.16:0,48,671	0/0:19,0:19:57.19:0,57,798	0/0:25,0:25:69.23:0,69,965	1/1:1,25:26:72.22:864,72,0	0/0:23,0:23:66.22:0,66,920	0/0:26,0:26:75.20:0,75,1003	0/0:7,0:7:21.07:0,21,294
chr10	5406317	.	G	GGGAA	11649.97	PASS	AB=0.542;AC=13;AF=0.232;AN=56;BaseQRankSum=3.357;DP=631;FS=7.979;HRun=0;HaplotypeScore=113.2721;InbreedingCoeff=0.9022;MQ=85.03;MQ0=0;MQRankSum=-14.220;QD=72.81;ReadPosRankSum=-1.531;VQSLOD=6.2092;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:84.29:0,84,1551	0/0:9,0:9:27.09:0,27,504	0/0:26,0:26:60.15:0,60,985	0/0:21,0:21:41.93:0,42,680	0/0:21,0:21:57.16:0,57,1000	0/0:18,0:18:45.14:0,45,802	0/0:25,0:25:72.22:0,72,1283	1/1:6,22:28:84.24:2100,84,0	0/0:28,0:28:84.26:0,84,1506	0/0:15,0:15:42.14:0,42,784	0/0:15,0:15:45.15:0,45,840	0/0:31,0:31:84.28:0,84,1538	0/0:28,0:28:75.20:0,75,1321	0/0:21,0:21:57.20:0,57,1055	1/1:5,15:20:57.16:1446,57,0	0/0:22,0:22:60.21:0,60,1120	1/1:8,17:25:69.13:1671,69,0	0/0:11,0:11:27.09:0,27,504	0/0:29,0:29:81.25:0,81,1421	0/0:21,0:21:57.18:0,57,1033	0/0:36,0:36:90.31:0,90,1641	0/0:19,0:19:57.18:0,57,1033	0/0:23,0:23:66.21:0,66,1201	0/0:23,0:23:66.20:0,66,1199	1/1:2,13:15:42.14:1114,42,0	0/1:5,27:32:15.67:2266,0,16	1/1:3,21:24:72.20:1803,72,0	1/1:2,14:16:48.16:1250,48,0
chr10	5406348	.	CAAGG	C	7576.47	PASS	AB=0.600;AC=13;AF=0.232;AN=56;BaseQRankSum=15.997;DP=651;FS=2.529;HRun=0;HaplotypeScore=130.8722;InbreedingCoeff=0.9030;MQ=75.91;MQ0=1;MQRankSum=-13.594;QD=47.65;ReadPosRankSum=2.948;VQSLOD=5.8092;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,117,3054	0/0:12,0:12:30.10:0,30,810	0/0:28,0:28:69.69:0,70,1627	0/0:22,0:22:60.20:0,60,1485	0/0:19,0:19:57.20:0,57,1500	0/0:21,0:21:60.21:0,60,1568	0/0:31,0:31:90.31:0,90,2428	1/1:4,15:19:45.15:852,45,0	0/0:24,0:24:72.25:0,72,1902	0/0:15,0:15:42.14:0,42,1107	0/0:18,0:18:48.16:0,48,1263	0/0:27,0:27:81.26:0,81,2044	0/0:24,0:24:69.24:0,69,1836	0/0:22,0:22:66.23:0,66,1761	1/1:0,24:24:72.25:1362,72,0	0/0:20,0:20:57.19:0,57,1495	1/1:3,21:24:54.19:1024,54,0	0/0:16,0:16:48.16:0,48,1296	0/0:24,0:24:72.23:0,72,1797	0/0:21,0:21:60.21:0,60,1519	0/0:35,0:35:99:0,102,2695	0/0:19,0:19:54.18:0,54,1407	0/0:24,0:24:69.23:0,69,1769	0/0:31,0:31:90.31:0,90,2430	1/1:2,11:13:33.11:626,33,0	0/1:10,20:30:14.83:1096,0,15	1/1:2,31:33:93.32:1764,93,0	1/1:0,15:15:45.15:852,45,0
chr10	5406900	.	TATTTCTAAACAGGTCC	T	10709.13	PASS	AB=0.568;AC=9;AF=0.161;AN=56;BaseQRankSum=14.114;DP=677;FS=13.631;HRun=0;HaplotypeScore=290.4528;InbreedingCoeff=0.8668;MQ=69.21;MQ0=1;MQRankSum=-11.395;QD=93.94;ReadPosRankSum=0.932;VQSLOD=3.3704;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,24:29:54.19:2576,54,0	0/0:16,0:16:48.16:0,48,3560	0/0:22,0:19:45.19:0,45,3201	0/0:27,0:25:72.17:0,72,4231	0/0:24,0:24:66.23:0,66,4670	0/0:25,0:25:75.24:0,75,5290	0/0:21,0:21:60.21:0,60,4676	0/0:40,0:40:99:0,111,7028	0/0:26,0:26:75.24:0,75,5543	0/0:29,0:29:87.30:0,87,6358	0/0:25,0:25:75.26:0,75,5582	0/0:24,0:24:72.25:0,72,5389	0/0:32,0:32:96.33:0,96,7052	0/0:29,0:29:87.28:0,87,6310	0/0:21,0:21:63.22:0,63,4848	0/1:5,16:21:30.70:1966,0,31	0/0:20,0:20:57.20:0,57,4228	0/0:26,0:26:78.27:0,78,5930	1/1:5,13:18:39.12:1407,39,0	1/1:2,23:25:63.22:2750,63,0	0/0:40,0:39:99:0,117,8577	1/1:4,17:21:45.15:2010,45,0	0/0:17,0:17:51.17:0,51,3347	0/0:25,0:25:72.25:0,72,5454	0/0:19,0:19:54.19:0,54,3922	0/0:25,0:25:75.26:0,75,5477	0/0:23,0:23:69.24:0,69,4805	0/0:7,0:7:21.07:0,21,1671
chr10	5407308	.	CAGAA	C	2871.71	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.922;DP=615;FS=0.526;HRun=0;HaplotypeScore=100.4375;InbreedingCoeff=0.9932;MQ=78.97;MQ0=1;MQRankSum=-2.323;QD=44.87;ReadPosRankSum=2.045;VQSLOD=3.8169;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,102,2752	0/0:11,0:11:30.10:0,30,801	0/0:17,0:17:48.64:0,49,1166	0/0:14,0:14:36.12:0,36,944	0/0:35,0:35:99:0,99,2615	0/0:26,0:26:78.27:0,78,2106	0/0:11,0:11:30.10:0,30,794	0/0:38,0:38:99:0,102,2680	0/0:25,0:25:75.26:0,75,2009	0/0:21,0:21:60.20:0,60,1567	0/0:18,0:18:54.13:0,54,1338	0/0:24,0:24:66.21:0,66,1694	0/0:15,0:15:42.14:0,42,1121	0/0:31,0:31:90.31:0,90,2375	0/0:30,0:30:87.30:0,87,2295	0/0:24,0:24:72.24:0,72,1844	0/0:22,0:22:66.20:0,66,1632	0/0:15,0:15:45.14:0,45,1157	0/0:22,0:22:63.22:0,63,1659	0/0:31,0:31:93.24:0,93,2372	0/0:28,0:28:81.26:0,81,2043	0/0:10,0:10:27.09:0,27,727	0/0:17,0:17:51.16:0,51,1321	0/0:9,0:9:27.09:0,27,729	0/0:21,0:21:60.21:0,60,1620	1/1:2,23:25:69.22:1255,69,0	1/1:1,32:32:78.27:1479,78,0	1/1:0,6:6:15.05:279,15,0
chr10	5407757	.	T	TA	6992.77	PASS	AB=0.526;AC=13;AF=0.232;AN=56;BaseQRankSum=-14.587;DP=608;FS=1.496;HRun=0;HaplotypeScore=56.9350;InbreedingCoeff=0.8951;MQ=91.52;MQ0=1;MQRankSum=-0.346;QD=40.66;ReadPosRankSum=-0.229;VQSLOD=5.0523;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:20:60.18:0,60,814	0/0:6,0:6:12.17:0,12,205	0/0:26,0:26:78.23:0,78,1033	0/0:23,0:23:66.09:0,66,833	0/0:28,0:28:81.27:0,81,1130	0/0:22,0:22:66.17:0,66,867	0/0:16,0:16:48.11:0,48,617	1/1:0,39:39:99:1641,117,0	0/0:18,0:18:54.15:0,54,720	0/0:30,0:30:90.29:0,90,1243	0/0:19,0:19:57.12:0,57,739	0/0:16,0:16:45.12:0,45,595	0/0:23,0:23:69.19:0,69,912	0/0:24,0:24:69.21:0,69,931	1/1:0,14:14:42.14:667,42,0	0/0:27,0:27:78.26:0,78,1089	1/1:0,19:19:45.15:716,45,0	0/0:12,0:12:30.08:0,30,400	0/0:13,0:13:39.10:0,39,498	0/0:31,0:31:93.28:0,93,1259	0/0:18,0:18:54.13:0,54,686	0/0:24,0:24:72.21:0,72,955	0/0:21,0:21:57.14:0,57,727	0/0:18,0:18:54.16:0,54,736	1/1:0,21:21:60.20:958,60,0	0/1:3,27:30:20.49:1124,0,20	1/1:1,37:38:90.31:1434,90,0	1/1:1,10:11:30.07:452,30,0
chr10	5407912	.	ATGTAG	A	2189.67	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.800;DP=569;FS=8.881;HRun=0;HaplotypeScore=107.6437;InbreedingCoeff=0.9941;MQ=88.82;MQ0=0;MQRankSum=-9.110;QD=44.69;ReadPosRankSum=1.049;VQSLOD=3.4122;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:45.15:0,45,1358	0/0:8,0:8:21.07:0,21,651	0/0:26,0:26:69.24:0,69,2044	0/0:16,0:16:42.08:0,42,1179	0/0:31,0:31:90.31:0,90,2718	0/0:22,0:22:60.19:0,60,1657	0/0:25,0:25:69.24:0,69,2101	0/0:28,0:28:66.22:0,66,1948	0/0:23,0:23:69.21:0,69,1979	0/0:19,0:19:54.18:0,54,1572	0/0:17,0:17:48.16:0,48,1447	0/0:15,0:15:42.13:0,42,1213	0/0:26,0:26:75.24:0,75,2225	0/0:19,0:19:54.19:0,54,1655	1/1:0,28:28:66.23:1348,66,0	0/0:24,0:24:72.25:0,72,2190	0/0:12,0:12:36.12:0,36,1095	0/0:8,0:8:24.04:0,24,670	0/0:11,0:11:27.08:0,27,725	0/0:25,0:25:69.24:0,69,2092	0/0:15,0:15:45.12:0,45,1232	0/0:25,0:25:72.25:0,72,2231	0/0:22,0:22:63.20:0,63,1863	0/0:25,0:25:72.23:0,72,2094	1/1:2,19:21:48.12:963,48,0	0/0:23,0:23:66.23:0,66,1996	0/0:33,0:33:96.31:0,96,2788	0/0:7,0:7:21.07:0,21,632
chr10	5408453	.	CA	C	5128.50	PASS	AB=0.542;AC=13;AF=0.232;AN=56;BaseQRankSum=13.924;DP=711;FS=4.300;HRun=7;HaplotypeScore=68.1975;InbreedingCoeff=0.9323;MQ=88.27;MQ0=0;MQRankSum=-0.839;QD=26.85;ReadPosRankSum=0.481;VQSLOD=5.6048;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:75.24:0,75,943	0/0:9,0:9:24.08:0,24,301	0/0:26,0:25:57.14:0,57,675	0/0:26,0:26:62.06:0,62,681	0/0:29,0:29:66.21:0,66,830	0/0:35,0:35:99:0,105,1305	0/0:21,0:21:60.19:0,60,755	1/1:2,34:36:99:1040,102,0	0/0:27,0:27:75.24:0,75,943	0/0:30,0:30:84.21:0,84,1020	0/0:26,0:26:78.25:0,78,982	0/0:25,0:25:75.24:0,75,940	0/0:26,0:26:72.22:0,72,891	0/0:25,0:25:69.20:0,69,853	1/1:3,40:43:99:1102,108,0	0/0:24,0:24:69.20:0,69,845	1/1:1,14:15:42.09:428,42,0	0/0:15,0:15:36.10:0,36,453	0/0:21,0:21:60.17:0,60,722	0/0:43,0:43:99:0,111,1396	0/0:35,0:35:96.31:0,96,1208	0/0:17,0:17:48.15:0,48,604	0/0:23,0:23:66.20:0,66,815	0/0:10,0:10:30.10:0,30,377	1/1:1,19:20:48.11:490,48,0	0/1:4,22:26:3.32:601,0,3	1/1:1,30:31:90.20:918,90,0	1/1:1,19:20:54.12:548,54,0
chr10	5409875	.	A	ACAAGC	13103.06	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-12.590;DP=675;FS=3.454;HRun=0;HaplotypeScore=116.2653;InbreedingCoeff=0.9842;MQ=86.96;MQ0=0;MQRankSum=-9.726;QD=70.07;ReadPosRankSum=0.116;VQSLOD=6.2553;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,117,2367	0/0:5,0:5:12.04:0,12,252	0/0:26,0:26:66.09:0,66,1262	0/0:24,0:25:49.50:0,49,1080	0/0:25,0:25:69.22:0,69,1378	0/0:29,0:29:87.26:0,87,1731	0/0:22,0:22:66.23:0,66,1345	1/1:9,11:26:69.18:1652,69,0	0/0:18,0:18:51.17:0,51,1044	0/0:33,0:33:96.32:0,96,1956	0/0:13,0:13:39.13:0,39,819	0/0:23,0:23:66.23:0,66,1342	0/0:22,0:22:60.21:0,60,1243	0/0:21,0:21:51.17:0,51,1039	1/1:4,26:33:66.23:2040,66,0	0/0:27,0:27:75.26:0,75,1547	1/1:2,26:28:69.24:2136,69,0	0/0:23,0:23:63.22:0,63,1308	0/0:21,0:21:60.20:0,60,1231	0/0:29,0:29:75.21:0,75,1517	0/0:18,0:18:54.19:0,54,1071	0/0:19,0:19:57.18:0,57,1132	0/0:19,0:19:51.16:0,51,1032	0/0:27,0:27:78.27:0,78,1606	1/1:1,13:13:33.11:1022,33,0	1/1:10,15:29:9.25:1744,9,0	1/1:4,33:37:93.30:2837,93,0	1/1:0,19:20:54.19:1672,54,0
chr10	5409996	.	T	TAA	4980.72	PASS	AB=0.833;AC=23;AF=0.411;AN=56;BaseQRankSum=4.376;DP=609;FS=32.524;HRun=10;HaplotypeScore=116.2190;InbreedingCoeff=0.9012;MQ=79.73;MQ0=1;MQRankSum=-6.633;QD=19.38;ReadPosRankSum=-5.884;VQSLOD=-0.0791;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:7,16:27:43.14:544,43,0	0/0:9,0:10:26.79:0,27,256	0/0:17,0:17:34.73:0,35,308	0/0:25,0:27:7.97:0,8,261	0/0:27,0:27:66.10:0,66,665	0/0:19,0:19:42.05:0,42,427	0/0:16,0:18:41.55:0,42,390	1/1:22,0:21:38.53:380,39,0	0/0:29,0:29:75.07:0,75,743	0/0:26,0:26:44.95:0,45,457	0/0:27,0:27:34.28:0,34,546	0/0:28,0:28:75.14:0,75,756	0/0:23,0:23:37.35:0,37,583	0/0:21,0:21:23.82:0,24,433	1/1:17,0:27:24.03:231,24,0	1/1:4,15:22:50.11:658,50,0	1/1:7,0:11:14.94:132,15,0	0/0:20,0:23:56:0,56,549	1/1:7,9:18:32.43:423,32,0	1/1:6,21:32:41.12:867,41,0	0/0:22,0:22:47.94:0,48,487	1/1:6,20:26:43.39:618,43,0	0/0:11,0:11:21.05:0,21,213	0/0:23,0:23:60.10:0,60,610	1/1:14,0:20:39.01:365,39,0	0/1:12,0:15:6.47:200,0,6	1/1:20,0:34:57.04:540,57,0	1/1:2,1:2:2.99:23,3,0
chr10	5410366	.	TAAATAAATAAATA	T	3781.12	PASS	AC=14;AF=0.259;AN=54;BaseQRankSum=7.789;DP=257;FS=16.161;HRun=0;HaplotypeScore=93.8147;InbreedingCoeff=0.7665;MQ=52.56;MQ0=3;MQRankSum=-8.525;QD=45.56;ReadPosRankSum=1.653;VQSLOD=1.9836;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:15.03:0,15,396	0/0:3,0:3:9.03:0,9,555	0/0:16,0:7:12.03:0,12,294	0/0:14,0:11:5.05:0,5,67	0/0:14,0:14:36.11:0,36,1857	0/0:22,0:22:48.16:0,48,2874	0/0:2,0:2:6.02:0,6,219	1/1:12,2:9:8.99:233,9,0	0/0:7,0:7:18.06:0,18,1157	0/0:9,0:9:21.07:0,21,1200	0/0:13,0:13:24.07:0,24,1145	./.	0/0:6,0:6:14.62:0,15,875	0/0:11,0:11:24.08:0,24,1338	1/1:1,4:5:12.04:410,12,0	0/0:3,0:3:6.02:0,6,314	1/1:9,4:9:3.01:91,3,0	0/0:12,0:12:27.09:0,27,1397	0/0:14,0:13:33.11:0,33,1371	0/0:6,0:6:12.04:0,12,339	0/0:5,0:5:12.04:0,12,579	0/0:2,0:2:3.01:0,3,168	0/0:1,0:1:3.01:0,3,193	0/0:2,0:2:3.01:0,3,153	1/1:8,4:12:18.06:581,18,0	1/1:9,11:19:33.11:1163,33,0	1/1:6,4:9:15.05:473,15,0	1/1:1,8:8:24.08:830,24,0
chr10	5410377	.	A	ATCTT	1917.80	PASS	AB=0.939;AC=11;AF=0.196;AN=56;BaseQRankSum=8.486;DP=227;FS=17.738;HRun=0;HaplotypeScore=61.2013;InbreedingCoeff=0.4688;MQ=52.83;MQ0=5;MQRankSum=-9.554;QD=28.62;ReadPosRankSum=1.703;VQSLOD=1.6271;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:7:15.03:0,15,252	0/0:4,0:4:12.04:0,12,239	0/0:15,0:5:15.04:0,15,228	0/0:7,0:4:3.89:0,4,37	0/0:16,0:16:45.14:0,45,864	0/0:19,0:19:48.16:0,48,958	0/0:2,0:2:6.02:0,6,119	0/1:11,0:10:42.19:452,0,42	0/0:6,0:6:18.06:0,18,360	0/0:8,0:8:24.08:0,24,479	0/0:11,0:11:27.08:0,27,496	0/0:2,0:2:3.01:0,3,60	0/0:8,0:8:20.98:0,21,384	0/0:11,0:11:30.10:0,30,597	0/1:5,0:5:9.31:119,0,9	0/0:3,0:3:6.02:0,6,97	0/1:7,2:5:9.67:146,0,10	0/0:11,0:11:30.10:0,30,576	0/0:17,0:16:45.47:0,45,721	0/0:5,0:5:12.04:0,12,210	0/0:4,0:4:12.04:0,12,228	0/0:1,0:1:3.01:0,3,36	0/0:2,0:2:6.02:0,6,119	0/0:1,0:1:3.01:0,3,60	1/1:9,1:10:5.50:277,5,0	1/1:15,1:15:9.85:477,10,0	1/1:6,1:5:14.84:261,15,0	1/1:8,1:8:23.27:342,23,0
chr10	5410395	.	T	TAA	3797.74	PASS	AC=14;AF=0.259;AN=54;BaseQRankSum=0.695;DP=256;FS=1.167;HRun=7;HaplotypeScore=51.1581;InbreedingCoeff=0.8577;MQ=53.81;MQ0=5;MQRankSum=-8.779;QD=40.84;ReadPosRankSum=-0.342;VQSLOD=2.8825;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:6:8.94:0,9,86	0/0:6,0:6:15.04:0,15,175	0/0:10,0:4:5.97:0,6,62	./.	0/0:19,0:19:54.13:0,54,608	0/0:21,0:21:49.39:0,49,562	0/0:2,0:2:6.02:0,6,70	1/1:1,22:23:66.23:1078,66,0	0/0:6,0:6:18.05:0,18,210	0/0:12,0:12:36.09:0,36,409	0/0:9,0:9:24.07:0,24,280	0/0:3,0:3:6.02:0,6,70	0/0:10,0:10:24.07:0,24,280	0/0:8,0:8:24.07:0,24,280	1/1:0,6:6:18.05:271,18,0	0/0:8,0:7:15.04:0,15,171	1/1:0,11:8:18.02:266,18,0	0/0:11,0:11:33.10:0,33,384	0/0:17,0:16:43.83:0,44,468	0/0:2,0:2:6.02:0,6,66	0/0:3,0:3:9.03:0,9,105	0/0:3,0:3:9.02:0,9,101	0/0:3,0:3:9.03:0,9,103	0/0:2,0:2:6.02:0,6,70	1/1:2,14:15:42.14:688,42,0	1/1:0,14:13:39.13:639,39,0	1/1:1,8:9:24.03:331,24,0	1/1:0,13:13:36.10:525,36,0
chr10	5410850	.	TA	T	576.02	PASS	AB=0.923;AC=13;AF=0.241;AN=54;BaseQRankSum=6.964;DP=424;FS=16.404;HRun=7;HaplotypeScore=75.2919;InbreedingCoeff=0.7748;MQ=62.48;MQ0=9;MQRankSum=-3.689;QD=6.33;ReadPosRankSum=1.020;VQSLOD=0.0711;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:22:29.30:0,29,231	./.	0/0:57,2:17:10.10:0,10,249	0/0:59,1:18:11.38:0,11,175	0/0:11,0:11:18:0,18,156	0/0:10,0:9:20.45:0,20,156	0/0:16,0:16:31.97:0,32,246	1/1:20,0:19:31.36:228,31,0	0/0:11,0:11:18.95:0,19,174	0/0:9,0:9:18:0,18,161	0/0:8,0:7:12.29:0,12,121	0/0:11,0:11:28.70:0,29,241	0/0:11,0:11:22.87:0,23,199	0/0:7,0:7:17.76:0,18,135	1/1:10,1:11:8.92:62,9,0	0/0:16,0:16:38.55:0,39,319	1/1:15,2:17:29.41:205,29,0	0/0:14,0:14:30.25:0,30,204	0/0:13,0:13:23.90:0,24,194	0/0:17,0:17:26.26:0,26,177	0/0:3,0:3:3:0,3,25	0/0:11,0:11:29.65:0,30,230	0/0:9,0:8:13.22:0,13,102	0/0:12,0:12:27.62:0,28,205	1/1:16,1:17:8.90:62,9,0	0/1:11,1:12:11.66:90,0,12	1/1:6,6:12:8.72:73,9,0	1/1:2,0:2:4.23:26,4,0
chr10	5410856	.	AAGGGG	A	1297.06	PASS	AB=1.000;AC=11;AF=0.204;AN=54;BaseQRankSum=4.642;DP=434;FS=0.621;HRun=0;HaplotypeScore=83.4735;InbreedingCoeff=0.5788;MQ=62.52;MQ0=11;MQRankSum=-4.614;QD=12.01;ReadPosRankSum=3.945;VQSLOD=1.7435;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:19,0:18:14.91:15,0,293	./.	0/0:74,0:21:55.18:0,55,824	0/0:66,0:19:22.46:0,22,489	0/0:9,0:9:21.02:0,21,240	0/0:11,0:10:27.01:0,27,324	0/0:18,0:18:45.01:0,45,517	1/1:5,0:18:25.05:409,25,0	0/0:8,0:8:24.02:0,24,265	0/0:10,0:10:23.94:0,24,247	0/0:10,0:9:23.71:0,24,301	0/0:14,0:14:39.38:0,39,453	0/0:11,0:11:26.99:0,27,376	0/0:8,0:8:21.02:0,21,305	1/1:3,0:11:8.98:87,9,0	0/0:15,0:15:30.36:0,30,602	1/1:4,12:17:39.13:689,39,0	0/0:12,0:12:19.10:0,19,423	0/0:13,0:13:35.61:0,36,300	0/1:13,0:13:12.77:13,0,182	0/0:2,0:2:2.96:0,3,19	0/0:12,0:12:29.93:0,30,277	0/0:6,0:5:13.22:0,13,102	0/0:13,0:13:33:0,33,351	1/1:4,12:16:14.65:174,15,0	0/1:13,0:13:70.21:74,0,70	0/0:12,0:12:14.56:0,15,141	0/0:2,0:2:3.90:0,4,43
chr10	5410857	.	AGGGG	A	802.86	PASS	AB=0.817;AC=12;AF=0.231;AN=52;BaseQRankSum=2.652;DP=432;FS=5.521;HRun=15;HaplotypeScore=79.5286;InbreedingCoeff=0.4351;MQ=62.59;MQ0=11;MQRankSum=-4.016;QD=6.92;ReadPosRankSum=1.632;VQSLOD=-0.6587;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:15,1:18:38.16:38,0,58	./.	0/0:76,0:22:19.11:0,19,597	0/0:66,0:19:13.37:0,13,344	0/0:9,0:9:9.02:0,9,136	0/0:11,0:10:15.01:0,15,224	0/0:17,0:18:20.27:0,20,174	1/1:16,0:18:19.92:204,20,0	0/0:7,0:7:6.01:0,6,62	0/0:11,0:11:8.95:0,9,153	0/0:10,0:9:8.22:0,8,137	0/0:14,0:14:20.74:0,21,186	0/0:11,0:11:12.03:0,12,155	0/0:8,0:8:12.04:0,12,147	1/1:11,0:11:9.02:114,9,0	0/0:15,0:15:13.31:0,13,270	1/1:17,0:17:38.98:402,39,0	0/1:10,1:11:18.63:19,0,166	0/0:11,0:12:19.66:0,20,141	0/1:10,3:13:38.20:84,0,38	0/0:2,0:2:2.88:0,3,15	0/0:12,0:12:5.91:0,6,39	./.	0/0:10,0:13:11.90:0,12,111	1/1:16,0:16:11.69:95,12,0	0/1:6,0:10:7.35:7,0,56	0/0:12,0:12:16.96:0,17,157	0/0:3,0:3:9.01:0,9,129
chr10	5411477	.	TCTTA	T	8419.99	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=15.465;DP=649;FS=0.692;HRun=0;HaplotypeScore=123.2945;InbreedingCoeff=0.9995;MQ=78.92;MQ0=0;MQRankSum=-11.898;QD=49.24;ReadPosRankSum=-1.202;VQSLOD=5.1934;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,150,3779	0/0:13,0:13:39.13:0,39,1040	0/0:18,0:20:41.30:0,41,1054	0/0:16,0:16:42.14:0,42,997	0/0:26,0:26:78.27:0,78,2080	0/0:26,0:25:75.26:0,75,1980	0/0:14,0:14:36.12:0,36,881	1/1:2,29:31:81.26:1453,81,0	0/0:26,0:26:78.27:0,78,2036	0/0:26,0:26:78.27:0,78,2045	0/0:30,0:30:81.28:0,81,2094	0/0:19,0:19:54.19:0,54,1400	0/0:23,0:23:66.23:0,66,1722	0/0:27,0:27:81.28:0,81,2159	1/1:3,21:23:63.22:1175,63,0	0/0:28,0:28:84.29:0,84,2210	1/1:0,13:13:36.12:671,36,0	0/0:9,0:9:24.08:0,24,640	0/0:12,0:12:30.10:0,30,756	0/0:25,0:25:75.26:0,75,1969	0/0:24,0:24:72.25:0,72,1901	0/0:20,0:20:57.17:0,57,1389	0/0:15,0:15:45.15:0,45,1160	0/0:28,0:28:84.29:0,84,2171	1/1:0,18:18:51.17:952,51,0	1/1:10,30:40:99:1953,111,0	1/1:4,25:28:75.26:1377,75,0	1/1:2,14:16:45.15:839,45,0
chr10	5411550	.	CTCTGAAAAT	C	13832.08	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=17.761;DP=653;FS=1.097;HRun=0;HaplotypeScore=205.8386;InbreedingCoeff=0.9992;MQ=77.18;MQ0=0;MQRankSum=-17.280;QD=88.67;ReadPosRankSum=1.846;VQSLOD=5.1997;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,114,5407	0/0:16,0:16:48.16:0,48,2366	0/0:26,0:26:75.26:0,75,3179	0/0:23,0:23:69.24:0,69,2873	0/0:27,0:27:78.27:0,78,3822	0/0:29,0:29:87.30:0,87,4405	0/0:18,0:18:54.17:0,54,2370	1/1:0,36:36:99:3308,105,0	0/0:24,0:24:72.23:0,72,3216	0/0:31,0:31:90.30:0,90,4103	0/0:33,0:33:99:0,99,4710	0/0:16,0:16:48.16:0,48,2304	0/0:23,0:23:69.22:0,69,3220	0/0:21,0:21:63.22:0,63,2976	1/1:0,22:22:57.20:1843,57,0	0/0:18,0:18:54.19:0,54,2437	1/1:0,9:9:21.07:591,21,0	0/0:12,0:12:33.11:0,33,1458	0/0:19,0:19:57.16:0,57,2605	0/0:34,0:34:99:0,102,4804	0/0:29,0:29:87.28:0,87,4097	0/0:24,0:24:72.25:0,72,3389	0/0:16,0:16:48.15:0,48,2192	0/0:20,0:20:60.21:0,60,3001	1/1:0,20:20:57.20:1843,57,0	1/1:0,29:29:84.29:2655,84,0	1/1:0,24:23:63.22:2053,63,0	1/1:0,16:16:48.16:1539,48,0
chr10	5411990	.	AG	A	7027.88	PASS	AB=0.545;AC=23;AF=0.411;AN=56;BaseQRankSum=12.264;DP=589;FS=5.508;HRun=5;HaplotypeScore=58.2914;InbreedingCoeff=0.9246;MQ=67.71;MQ0=11;MQRankSum=-3.340;QD=27.67;ReadPosRankSum=-0.250;VQSLOD=4.7987;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,35:35:87.25:986,87,0	0/0:10,0:9:27.09:0,27,369	0/0:15,0:11:29.77:0,30,374	0/0:15,0:14:29.13:0,29,366	0/0:29,0:29:81.27:0,81,1107	0/0:11,0:10:30.10:0,30,409	0/0:20,0:20:57.10:0,57,737	1/1:3,19:21:51.13:569,51,0	0/0:17,0:15:45.15:0,45,616	0/0:23,0:22:63.21:0,63,861	0/0:22,0:22:63.19:0,63,844	0/0:26,0:25:72.24:0,72,982	0/0:18,0:18:54.16:0,54,706	0/0:27,0:26:69.19:0,69,921	1/1:4,12:16:36.10:408,36,0	1/1:4,18:21:63.16:705,63,0	1/1:4,17:19:45.13:510,45,0	0/0:26,0:26:72.23:0,72,969	1/1:2,13:14:36.10:408,36,0	1/1:1,23:24:66.16:735,66,0	0/0:17,0:17:39.09:0,39,512	1/1:0,26:24:69.16:768,69,0	0/0:23,0:23:57.15:0,57,745	0/0:36,0:36:99:0,105,1420	1/1:1,19:19:48.14:544,48,0	0/1:4,20:24:53.94:611,0,54	1/1:3,19:21:51.14:578,51,0	1/1:0,6:6:18.05:204,18,0
chr10	5412078	.	C	CAAAA	11491.79	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-0.956;DP=648;FS=2.957;HRun=11;HaplotypeScore=110.7643;InbreedingCoeff=0.9565;MQ=56.59;MQ0=13;MQRankSum=-10.682;QD=37.93;ReadPosRankSum=-6.738;VQSLOD=2.2855;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:15,15:31:76.39:1505,76,0	0/0:7,0:8:19.29:0,19,248	0/0:10,0:7:9.19:0,9,74	0/0:8,0:7:14.17:0,14,143	0/0:27,0:26:75.21:0,75,1004	0/0:18,0:18:43.28:0,43,575	0/0:34,0:34:72.01:0,72,964	1/1:16,2:29:51.01:668,51,0	0/0:20,0:18:41.25:0,41,537	0/0:15,0:15:31.24:0,31,412	0/0:15,0:15:36:0,36,452	0/0:27,0:26:60.10:0,60,797	0/0:27,0:26:68.66:0,69,886	0/0:36,0:35:84.16:0,84,1137	1/1:15,6:22:30.08:575,30,0	1/1:7,21:30:69.23:1488,69,0	1/1:7,9:15:33.11:723,33,0	0/0:21,0:20:42:0,42,569	1/1:15,7:22:42.06:800,42,0	1/1:8,13:23:60.20:1255,60,0	0/0:16,0:16:21.87:0,22,359	1/1:7,13:26:58.70:1039,59,0	0/0:19,0:19:39.05:0,39,528	0/0:38,0:40:99:0,102,1331	1/1:16,10:25:48.16:995,48,0	1/1:11,9:20:1.26:750,1,0	1/1:15,14:28:51.12:1063,51,0	1/1:6,9:16:30.10:630,30,0
chr10	5412369	.	A	AG	15677.88	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-9.060;DP=752;FS=2.615;HRun=0;HaplotypeScore=75.5786;InbreedingCoeff=0.9999;MQ=90.76;MQ0=0;MQRankSum=-6.027;QD=44.79;ReadPosRankSum=2.918;VQSLOD=5.3563;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,40:41:99:1822,114,0	0/0:18,0:18:54.18:0,54,755	0/0:36,0:36:97.98:0,98,1375	0/0:26,0:26:72.16:0,72,948	0/0:20,0:20:57.19:0,57,797	0/0:19,0:19:57.19:0,57,797	0/0:35,0:35:99:0,105,1437	1/1:0,37:37:99:1753,111,0	0/0:38,0:38:99:0,111,1527	0/0:20,0:20:57.17:0,57,752	0/0:12,0:12:33.10:0,33,446	0/0:17,0:17:51.17:0,51,713	0/0:25,0:25:75.23:0,75,1029	0/0:27,0:27:81.26:0,81,1118	1/1:1,41:42:99:1795,114,0	1/1:1,28:29:42.32:1253,42,0	1/1:0,27:27:78.27:1246,78,0	0/0:33,0:33:93.29:0,93,1279	1/1:0,17:17:48.16:763,48,0	1/1:0,23:23:66.23:1055,66,0	0/0:31,0:31:93.31:0,93,1301	1/1:0,31:31:84.29:1340,84,0	0/0:22,0:22:60.19:0,60,824	0/0:23,0:23:69.23:0,69,964	1/1:0,15:15:39.08:624,39,0	1/1:0,22:21:66.23:1055,66,0	1/1:0,31:31:87.30:1390,87,0	1/1:0,35:35:99:1581,99,0
chr10	5414827	.	TCCCCCC	T	8130.68	PASS	AB=0.531;AC=19;AF=0.339;AN=56;BaseQRankSum=14.660;DP=522;FS=22.066;HRun=13;HaplotypeScore=163.4826;InbreedingCoeff=0.8982;MQ=84.64;MQ0=4;MQRankSum=-14.656;QD=39.86;ReadPosRankSum=12.831;VQSLOD=-0.5188;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:10,26:36:74.39:1421,74,0	0/0:7,0:9:23.92:0,24,627	0/0:51,0:28:55.81:0,56,1119	0/0:37,0:32:41.17:0,41,751	0/0:12,0:14:33.11:0,33,940	0/0:15,0:16:30.10:0,30,903	0/0:15,0:22:43.39:0,43,1055	1/1:8,13:21:38.68:763,39,0	0/0:14,0:15:33.10:0,33,818	0/0:12,0:14:24.07:0,24,609	0/0:14,0:16:26.69:0,27,647	0/0:6,0:7:21.07:0,21,625	0/0:10,0:10:21.06:0,21,552	0/0:10,0:12:24.08:0,24,696	0/0:18,0:18:45.15:0,45,1311	0/1:2,0:17:21.34:407,0,21	1/1:6,20:26:53.59:1056,54,0	0/0:10,0:13:33.11:0,33,1003	1/1:0,0:7:18.05:207,18,0	1/1:1,0:21:60.15:650,60,0	0/0:16,0:16:36.12:0,36,1132	1/1:0,0:17:48.12:522,48,0	0/0:9,0:9:20.14:0,20,490	0/0:19,0:21:45.63:0,46,1308	0/0:14,0:16:30.10:0,30,784	1/1:1,26:27:5.52:1402,6,0	1/1:2,20:22:56.75:1115,57,0	1/1:0,10:10:30.10:587,30,0
chr10	5415819	.	C	CT	15229.74	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-1.032;DP=763;FS=0.271;HRun=0;HaplotypeScore=79.9296;InbreedingCoeff=0.9988;MQ=83.38;MQ0=0;MQRankSum=-3.931;QD=43.76;ReadPosRankSum=0.958;VQSLOD=5.1875;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,43:43:99:1725,108,0	0/0:8,0:8:18.06:0,18,251	0/0:33,0:33:87.23:0,87,1151	0/0:21,0:21:45.51:0,46,694	0/0:12,0:12:33.09:0,33,428	0/0:28,0:28:84.18:0,84,1109	0/0:30,0:30:87.24:0,87,1159	1/1:2,42:44:99:1899,123,0	0/0:26,0:26:53.21:0,53,997	0/0:28,0:28:78.12:0,78,1040	0/0:25,0:25:69.22:0,69,947	0/0:30,0:30:84.19:0,84,1129	0/0:38,0:38:99:0,114,1570	0/0:29,0:29:84.25:0,84,1150	1/1:0,50:50:99:2156,135,0	1/1:0,29:29:81.28:1295,81,0	1/1:0,19:19:48.16:767,48,0	0/0:14,0:14:39.13:0,39,545	1/1:0,23:24:72.19:1098,72,0	1/1:0,20:20:57.19:910,57,0	0/0:43,0:43:99:0,117,1616	1/1:0,33:33:96.33:1531,96,0	0/0:25,0:25:69.19:0,69,938	0/0:25,0:25:72.24:0,72,1005	1/1:1,20:20:57.19:908,57,0	1/1:0,16:16:48.09:689,48,0	1/1:0,35:34:99:1676,105,0	1/1:0,14:14:36.12:575,36,0
chr10	5416066	.	TCC	T	1244.48	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=1.148;DP=469;FS=14.297;HRun=2;HaplotypeScore=93.3694;InbreedingCoeff=0.8460;MQ=68.25;MQ0=11;MQRankSum=-2.259;QD=13.98;ReadPosRankSum=-1.215;VQSLOD=-0.5631;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,0:5:5.94:42,6,0	0/0:7,0:7:10.72:0,11,278	0/0:31,0:17:30.40:0,30,373	0/0:27,0:21:15.97:0,16,398	0/0:10,0:10:29.97:0,30,361	0/0:16,0:15:21.82:0,22,353	0/0:26,0:25:56.11:0,56,894	0/1:24,0:24:14.33:318,0,14	0/0:14,0:14:24.95:0,25,420	0/0:14,0:14:39.34:0,39,493	0/0:18,0:18:52.78:0,53,553	0/0:15,0:15:35.99:0,36,506	0/0:15,0:15:45.07:0,45,701	0/0:13,0:13:28.69:0,29,441	1/1:7,0:6:5.54:41,6,0	0/0:16,0:16:37.81:0,38,312	0/0:15,0:14:30.56:0,31,226	0/0:24,0:24:72.03:0,72,977	0/0:16,0:16:47.31:0,47,438	0/0:12,0:12:29.83:0,30,316	0/0:25,0:24:56.73:0,57,724	0/0:18,0:17:35.51:0,36,329	0/0:14,0:13:22.95:0,23,411	0/0:34,0:34:68.30:0,68,1278	1/1:18,1:18:35.76:322,36,0	1/1:11,2:13:38.28:294,38,0	1/1:12,1:13:32.50:224,33,0	1/1:6,2:8:23.44:184,23,0
chr10	5416097	.	ACACACACGCAGGCACGCAGGCACGCAGGCACGCACG	A	2419.22	PASS	AB=1.000;AC=7;AF=0.130;AN=54;BaseQRankSum=5.802;DP=500;FS=0.000;HRun=0;HaplotypeScore=381.6450;InbreedingCoeff=0.6974;MQ=49.80;MQ0=23;MQRankSum=-5.196;QD=47.44;ReadPosRankSum=1.390;VQSLOD=0.7842;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:11,0:11:24.08:0,24,1890	0/0:19,0:5:14.41:0,14,359	0/0:29,0:13:27.52:0,28,1696	0/0:11,0:11:24.08:0,24,2080	0/0:10,0:9:18.06:0,18,1553	0/0:31,0:30:70.79:0,71,7628	0/0:18,0:13:28.32:0,28,319	0/0:13,0:13:24.55:0,25,2547	0/0:26,0:26:67.46:0,67,5727	0/0:13,0:13:30.08:0,30,2256	0/0:15,0:15:30.10:0,30,3106	0/0:13,0:13:39.13:0,39,4097	0/0:15,0:15:33.11:0,33,4017	0/0:10,0:10:1.82:0,2,5	0/0:16,0:16:33.09:0,33,1632	0/0:17,0:16:26.63:0,27,1651	0/0:24,0:24:61.37:0,61,6631	0/0:17,0:15:38.62:0,39,1115	0/0:15,0:15:13.24:0,13,220	0/0:36,0:35:60.16:0,60,7298	0/0:31,0:29:24.81:0,25,703	0/0:12,0:11:27.09:0,27,3339	0/0:34,0:34:75.26:0,75,7446	0/1:15,0:14:99:255,0,109	1/1:14,2:17:14.73:1154,15,0	1/1:10,1:11:3.49:426,3,0	1/1:6,2:8:9.03:714,9,0
chr10	5416107	.	AGGCACGCAGG	A	2929.75	PASS	AB=0.803;AC=19;AF=0.365;AN=52;BaseQRankSum=10.282;DP=379;FS=18.272;HRun=0;HaplotypeScore=138.7144;InbreedingCoeff=0.6651;MQ=56.43;MQ0=18;MQRankSum=-6.585;QD=24.41;ReadPosRankSum=1.168;VQSLOD=1.9126;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/0:8,0:8:21.02:0,21,757	0/1:19,0:8:32.74:33,0,666	0/0:25,0:12:33.09:0,33,1008	0/0:9,0:9:24.08:0,24,1011	0/0:8,0:8:18.06:0,18,734	0/0:29,0:29:77.07:0,77,3195	./.	0/0:10,0:10:27.09:0,27,1037	0/0:21,0:21:60.11:0,60,2146	0/0:8,0:8:24.08:0,24,910	0/0:11,0:11:33.11:0,33,1327	0/0:15,0:15:45.05:0,45,1802	0/0:14,0:14:36.12:0,36,1621	1/1:0,0:4:3.01:42,3,0	1/1:3,7:14:27.08:562,27,0	0/1:4,3:12:9.20:636,0,9	0/0:19,0:19:54.16:0,54,2287	0/1:10,2:10:39.20:322,0,39	1/1:4,6:11:3.30:40,3,0	0/0:33,0:32:68.90:0,69,3119	1/1:14,13:26:17.79:311,18,0	0/0:11,0:11:33.11:0,33,1450	0/0:27,0:27:71.46:0,71,2747	1/1:7,0:9:18.06:357,18,0	1/1:2,0:5:15.05:397,15,0	1/1:1,0:2:6.02:167,6,0	1/1:2,0:3:9.03:249,9,0
chr10	5416111	.	ACGCAGG	A	1453.03	PASS	AB=0.979;AC=16;AF=0.320;AN=50;BaseQRankSum=9.773;DP=369;FS=5.587;HRun=0;HaplotypeScore=115.5021;InbreedingCoeff=0.7577;MQ=59.43;MQ0=18;MQRankSum=-7.064;QD=14.83;ReadPosRankSum=2.589;VQSLOD=2.4511;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/0:8,0:8:18.06:0,18,542	0/1:22,0:11:0.38:0,0,599	0/0:27,0:13:39.12:0,39,966	0/0:11,0:11:33.11:0,33,928	0/0:8,0:8:18.06:0,18,572	0/0:26,0:26:75.24:0,75,2415	./.	0/0:10,0:10:27.09:0,27,793	0/0:20,0:20:54.08:0,54,1572	0/0:8,0:8:23.91:0,24,689	0/0:11,0:11:33.07:0,33,993	0/0:15,0:15:42.01:0,42,1254	0/0:14,0:14:36.12:0,36,1172	./.	1/1:9,4:13:19.24:326,19,0	1/1:12,0:12:20.81:441,21,0	0/0:17,0:17:45.15:0,45,1527	0/1:9,0:7:55.72:157,0,56	0/0:9,1:10:0.86:0,1,11	0/0:34,0:32:69.24:0,69,2342	1/1:25,1:24:8.43:115,8,0	0/0:13,0:13:39.13:0,39,1178	0/0:26,0:26:66.07:0,66,1931	1/1:5,0:5:9.03:126,9,0	1/1:5,0:5:15.05:223,15,0	1/1:2,0:2:6.02:93,6,0	1/1:3,0:3:9.03:148,9,0
chr10	5416181	.	GT	G	4372.83	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=14.677;DP=490;FS=2.580;HRun=10;HaplotypeScore=99.3407;InbreedingCoeff=0.9813;MQ=79.49;MQ0=0;MQRankSum=-5.858;QD=22.09;ReadPosRankSum=0.208;VQSLOD=4.9487;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,8:9:20.95:175,21,0	0/0:6,0:6:18.05:0,18,199	0/0:22,0:22:35.30:0,35,365	0/0:14,0:14:12.26:0,12,203	0/0:24,0:24:60.10:0,60,638	0/0:15,0:15:45.12:0,45,498	0/0:15,0:15:36.10:0,36,398	1/1:3,17:20:50.98:442,51,0	0/0:22,0:22:60.12:0,60,650	0/0:17,0:17:48.13:0,48,528	0/0:22,0:22:54.04:0,54,556	0/0:19,0:19:48.13:0,48,531	0/0:17,1:18:29.46:0,29,531	0/0:20,0:20:51.13:0,51,556	1/1:1,10:11:29.99:260,30,0	1/1:1,10:11:23.99:208,24,0	1/1:3,9:13:29.48:236,29,0	0/0:11,1:12:7.03:0,7,296	1/1:6,19:26:59.01:501,59,0	1/1:1,17:18:50.99:442,51,0	0/0:19,0:19:54.14:0,54,590	1/1:1,23:24:65.97:573,66,0	0/0:24,1:25:43.14:0,43,680	0/0:21,1:22:34.11:0,34,604	1/1:0,24:24:71.99:625,72,0	1/1:3,9:12:26.98:234,27,0	1/1:2,18:20:50.97:442,51,0	1/1:1,9:10:26.99:234,27,0
chr10	5416270	.	CG	C	1803.33	PASS	AB=0.522;AC=13;AF=0.232;AN=56;BaseQRankSum=13.893;DP=494;FS=4.930;HRun=1;HaplotypeScore=105.5335;InbreedingCoeff=0.9112;MQ=89.03;MQ0=0;MQRankSum=-12.041;QD=19.39;ReadPosRankSum=0.926;VQSLOD=3.8699;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,17:19:44.89:370,45,0	0/0:8,0:8:24.05:0,24,306	0/0:24,0:24:69.10:0,69,911	0/0:18,0:18:24.21:0,24,424	0/0:20,0:20:57.12:0,57,750	0/0:20,0:20:57.18:0,57,793	0/0:22,0:22:63.15:0,63,858	1/1:5,12:17:35.96:307,36,0	0/0:18,0:18:54.08:0,54,703	0/0:15,0:15:42.05:0,42,550	0/0:18,0:18:51.17:0,51,713	0/0:15,0:15:45.15:0,45,641	0/0:18,0:18:48.16:0,48,681	0/0:15,0:15:45.15:0,45,636	1/1:1,11:12:29.98:257,30,0	0/0:18,0:18:41.95:0,42,577	0/0:31,0:31:81.18:0,81,1100	0/0:18,0:18:54.18:0,54,770	0/0:20,0:20:60.15:0,60,794	0/0:16,0:16:39.02:0,39,504	0/0:24,0:24:69.08:0,69,892	0/0:21,0:21:60.11:0,60,790	0/0:15,0:15:45.15:0,45,638	0/0:27,0:27:78.25:0,78,1094	1/1:1,13:15:44.82:364,45,0	0/1:1,11:12:6.68:235,0,7	1/1:2,12:14:41.94:353,42,0	1/1:0,4:4:12:106,12,0
chr10	5416272	.	CCCA	C	2204.97	PASS	AB=0.522;AC=13;AF=0.232;AN=56;BaseQRankSum=13.985;DP=511;FS=4.180;HRun=0;HaplotypeScore=128.3585;InbreedingCoeff=0.8920;MQ=88.76;MQ0=0;MQRankSum=-12.580;QD=23.46;ReadPosRankSum=2.227;VQSLOD=3.8146;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,17:20:44.84:437,45,0	0/0:7,0:7:21.07:0,21,495	0/0:25,0:25:72.21:0,72,1413	0/0:18,0:18:21.94:0,22,719	0/0:24,0:24:69.24:0,69,1507	0/0:20,0:20:57.20:0,57,1346	0/0:22,0:22:66.23:0,66,1506	1/1:4,10:14:30.07:327,30,0	0/0:18,0:18:53.76:0,54,1162	0/0:14,0:14:39.13:0,39,920	0/0:18,0:18:51.17:0,51,1176	0/0:15,0:15:45.15:0,45,1060	0/0:21,0:21:57.20:0,57,1253	0/0:16,0:16:48.16:0,48,1110	1/1:1,11:12:30.07:318,30,0	0/0:22,0:22:54.07:0,54,1190	0/0:31,0:31:90.30:0,90,2016	0/0:18,0:18:54.19:0,54,1277	0/0:21,0:21:63.19:0,63,1373	0/0:17,0:17:39.13:0,39,872	0/0:26,0:26:75.24:0,75,1652	0/0:21,0:21:57.20:0,57,1339	0/0:15,0:15:45.15:0,45,1024	0/0:28,0:28:81.28:0,81,1857	1/1:3,13:16:45.03:452,45,0	0/1:1,11:12:34.90:304,0,35	1/1:4,12:16:42.04:426,42,0	1/1:1,3:4:12.03:130,12,0
chr10	5416301	.	T	TC	9906.53	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=5.400;DP=582;FS=0.000;HRun=1;HaplotypeScore=96.1893;InbreedingCoeff=0.9727;MQ=87.48;MQ0=0;MQRankSum=-8.773;QD=39.31;ReadPosRankSum=-0.272;VQSLOD=4.7694;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,27:27:78.19:1118,78,0	0/0:8,0:8:24.06:0,24,297	0/0:21,0:21:57.18:0,57,726	0/0:25,0:25:72.22:0,72,917	0/0:20,0:20:60.19:0,60,778	0/0:27,0:27:75.23:0,75,960	0/0:20,0:20:60.16:0,60,749	1/1:3,22:25:69.23:1033,69,0	0/0:15,0:15:45.15:0,45,584	0/0:21,0:21:60.19:0,60,765	0/0:17,0:17:51.15:0,51,648	0/0:21,0:21:60.19:0,60,779	0/0:17,0:17:45.15:0,45,584	0/0:19,0:19:54.18:0,54,701	1/1:2,15:17:44.98:573,45,0	1/1:1,18:20:15.42:722,15,0	1/1:1,33:34:90.30:1349,90,0	0/0:20,0:20:57.14:0,57,708	1/1:0,20:20:60.19:878,60,0	1/1:1,19:20:53.97:777,54,0	0/0:39,0:39:99:0,111,1440	1/1:1,23:24:66.22:989,66,0	0/0:15,0:15:45.15:0,45,584	0/0:25,0:25:75.24:0,75,972	1/1:2,18:20:57.15:825,57,0	1/1:1,14:15:3.17:538,3,0	1/1:2,20:22:57.19:845,57,0	1/1:3,5:8:18.06:260,18,0
chr10	5417459	.	G	GGACA	9892.07	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=0.966;DP=667;FS=9.800;HRun=0;HaplotypeScore=145.5620;InbreedingCoeff=0.9818;MQ=69.31;MQ0=0;MQRankSum=-8.229;QD=37.05;ReadPosRankSum=0.330;VQSLOD=4.8666;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:32,0:32:18.05:359,18,0	0/0:6,0:6:18.06:0,18,315	0/0:18,0:18:42.11:0,42,643	0/0:22,0:22:51.17:0,51,831	0/0:17,0:17:33.11:0,33,578	0/0:24,0:24:63.22:0,63,1104	0/0:23,0:23:54.15:0,54,886	1/1:19,0:19:30.10:684,30,0	0/0:27,0:27:75.24:0,75,1277	0/0:28,0:28:75.24:0,75,1264	0/0:15,0:15:33.11:0,33,574	0/0:30,0:30:78.25:0,78,1339	0/0:27,0:27:63.20:0,63,1064	0/0:25,0:25:72.24:0,72,1235	1/1:22,0:22:21.06:415,21,0	1/1:4,17:21:35.87:918,36,0	1/1:10,38:51:99:2753,108,0	0/0:25,0:25:66.21:0,66,1109	1/1:11,14:27:54.17:1262,54,0	1/1:2,11:14:24.08:612,24,0	0/0:60,0:60:99:0,159,2671	1/1:8,15:23:36.12:907,36,0	0/0:18,0:18:48.16:0,48,841	0/0:35,0:35:90.31:0,90,1578	1/1:16,0:16:27.08:557,27,0	1/1:18,0:18:27.09:607,27,0	1/1:20,0:20:33.07:688,33,0	1/1:4,0:4:6.02:130,6,0
chr10	5417473	.	A	ACAGG	4838.12	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=11.318;DP=629;FS=14.327;HRun=0;HaplotypeScore=153.1156;InbreedingCoeff=0.9770;MQ=78.09;MQ0=0;MQRankSum=-12.045;QD=41.35;ReadPosRankSum=-2.201;VQSLOD=4.0257;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,22:24:18.06:513,18,0	0/0:6,0:6:18.06:0,18,346	0/0:18,0:18:36.17:0,36,871	0/0:27,0:28:77.24:0,77,1444	0/0:15,0:15:45.13:0,45,902	0/0:25,0:25:75.26:0,75,1545	0/0:24,0:24:72.23:0,72,1453	1/1:5,20:26:62.57:1103,63,0	0/0:25,0:25:75.26:0,75,1573	0/0:32,0:32:93.31:0,93,1908	0/0:12,0:12:36.12:0,36,755	0/0:29,0:29:87.28:0,87,1770	0/0:22,0:22:66.21:0,66,1316	0/0:29,0:29:87.30:0,87,1781	1/1:9,10:19:27.09:615,27,0	0/0:16,0:16:44.81:0,45,702	0/0:43,0:43:99:0,114,1707	0/0:25,0:25:69.24:0,69,1431	0/0:18,0:18:51.06:0,51,816	0/0:15,0:15:32.98:0,33,504	0/0:60,0:60:99:0,175,3550	0/0:17,0:17:41.26:0,41,550	0/0:17,0:17:47.95:0,48,980	0/0:36,0:36:99:0,102,2097	1/1:1,13:14:24.08:687,24,0	1/1:4,11:15:36.05:887,36,0	1/1:1,14:15:30.06:861,30,0	1/1:1,3:4:6.02:172,6,0
chr10	5417570	.	G	GGGAGGTCTGGGGTTACT	13362.47	PASS	AB=0.846;AC=13;AF=0.232;AN=56;BaseQRankSum=6.141;DP=637;FS=10.789;HRun=0;HaplotypeScore=283.0194;InbreedingCoeff=0.8807;MQ=79.23;MQ0=0;MQRankSum=-13.742;QD=104.39;ReadPosRankSum=-2.734;VQSLOD=2.7052;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,6:23:12.04:734,12,0	0/0:10,0:10:27.09:0,27,1294	0/0:25,0:25:68.87:0,69,2307	0/0:27,0:27:41.36:0,41,2104	0/0:27,0:27:81.26:0,81,3553	0/0:28,0:28:73.78:0,74,3926	0/0:25,0:25:72.20:0,72,2845	1/1:12,0:12:26.97:984,27,0	0/0:18,0:18:54.16:0,54,2310	0/0:24,0:24:63.21:0,63,2605	0/0:16,0:16:48.15:0,48,2158	0/0:27,0:27:78.22:0,78,3234	0/0:31,0:31:93.27:0,93,3918	0/0:29,0:29:84.22:0,84,3709	1/1:8,14:31:60.16:4251,60,0	0/0:31,0:31:93.30:0,93,4123	0/0:29,0:29:84.25:0,84,3606	0/0:10,0:10:30.10:0,30,1367	0/0:20,0:20:57.18:0,57,2302	0/0:16,0:16:42.14:0,42,1955	0/0:55,0:55:99:0,130,6406	0/0:16,0:16:42.14:0,42,1697	0/0:18,0:18:51.16:0,51,2248	0/0:27,0:26:78.22:0,78,3266	1/1:8,3:11:24.08:1385,24,0	0/1:18,4:22:99:2328,0,103	1/1:14,5:23:48.16:3340,48,0	1/1:3,1:4:8.99:341,9,0
chr10	5417924	.	AAG	A	178.39	PASS	AB=1.000;AC=18;AF=0.600;AN=30;BaseQRankSum=-0.187;DP=541;FS=6.107;HRun=0;HaplotypeScore=86.2078;InbreedingCoeff=0.2076;MQ=67.98;MQ0=11;MQRankSum=1.082;QD=0.97;ReadPosRankSum=0.560;VQSLOD=1.0838;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	0/0:45,0:15:0:0,0,0	./.	./.	./.	./.	0/0:10,0:10:2.99:0,3,24	0/0:24,0:24:0.47:0,0,2	0/0:15,0:15:3:0,3,30	0/1:10,0:10:24.28:25,0,24	./.	1/1:10,0:10:0.47:1,0,0	0/1:28,0:26:17.04:25,0,17	1/1:12,0:12:6:56,6,0	1/1:20,0:20:0.36:1,0,0	1/1:13,4:17:3.01:31,3,0	./.	1/1:18,0:18:2.96:20,3,0	0/0:20,0:20:5.74:0,6,37	./.	./.	1/1:26,0:27:11.68:90,12,0	./.	1/1:23,0:23:2.84:14,3,0	1/1:19,0:19:2.84:14,3,0	./.
chr10	5418063	.	T	TTGAAAGCGAGGCACG	24727.89	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=0.948;DP=693;FS=8.463;HRun=0;HaplotypeScore=272.0477;InbreedingCoeff=0.9990;MQ=65.13;MQ0=0;MQRankSum=-17.140;QD=148.96;ReadPosRankSum=-0.748;VQSLOD=3.5832;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:18,11:30:69.19:4485,69,0	0/0:10,0:10:27.09:0,27,1211	0/0:18,0:18:44.52:0,45,1615	0/0:18,0:18:54.19:0,54,1773	0/0:30,0:30:78.24:0,78,3182	0/0:14,0:14:42.13:0,42,1767	0/0:28,0:28:81.28:0,81,3406	1/1:19,1:20:39.13:2105,39,0	0/0:24,0:24:66.23:0,66,2708	0/0:29,0:29:84.28:0,84,3539	0/0:23,0:23:66.23:0,66,2779	0/0:32,0:32:96.30:0,96,3773	0/0:30,0:30:90.31:0,90,3853	0/0:35,0:35:99:0,105,4321	1/1:14,15:29:75.18:4401,75,0	0/0:22,0:22:66.21:0,66,2512	0/0:35,0:35:99:0,99,4005	0/0:34,0:34:96.33:0,96,3803	0/0:17,0:17:45.12:0,45,1521	0/0:23,0:23:66.21:0,66,2659	0/0:48,0:48:99:0,138,5709	0/0:16,0:16:45.14:0,45,1745	0/0:15,0:15:39.13:0,39,1723	0/0:26,0:26:78.22:0,78,3260	1/1:13,11:25:57.15:3467,57,0	1/1:12,7:20:57.20:3851,57,0	1/1:19,12:31:78.27:5137,78,0	1/1:3,5:9:21.07:1282,21,0
chr10	5418893	.	GGA	G	1233.40	PASS	AB=0.986;AC=18;AF=0.321;AN=56;BaseQRankSum=17.009;DP=663;FS=0.374;HRun=0;HaplotypeScore=147.1838;InbreedingCoeff=0.6232;MQ=85.21;MQ0=2;MQRankSum=-8.748;QD=5.12;ReadPosRankSum=-1.007;VQSLOD=3.1152;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:31,3:34:40.84:214,41,0	0/0:8,0:8:15.01:0,15,222	0/0:22,0:21:59.31:0,59,725	0/1:32,0:30:0.94:1,0,752	0/0:21,0:21:62.84:0,63,925	0/0:19,0:19:57.19:0,57,947	0/0:31,0:31:87.20:0,87,1270	1/1:18,3:21:43.96:341,44,0	0/0:29,0:29:87.04:0,87,1179	0/0:25,0:25:75.21:0,75,1096	0/0:19,0:19:57.18:0,57,920	0/0:41,0:41:99:0,123,1891	0/0:33,0:33:87.17:0,87,1324	0/0:27,0:27:78.13:0,78,1184	1/1:27,1:28:48.99:266,49,0	0/1:26,0:26:55.02:72,0,55	0/0:20,0:20:48.52:0,49,208	0/0:26,0:26:77.83:0,78,1140	1/1:20,0:20:19.71:144,20,0	0/0:15,0:15:3.99:0,4,37	0/0:37,0:35:99:0,108,1670	0/1:24,0:24:14.75:30,0,15	0/0:17,0:17:51.07:0,51,809	0/0:32,0:32:96.19:0,96,1431	1/1:18,2:20:2.71:85,3,0	0/1:16,1:17:67.29:114,0,67	1/1:15,2:17:28.33:145,28,0	1/1:2,0:2:3.63:10,4,0
chr10	5418895	.	AG	A	397.78	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.330;DP=651;FS=3.802;HRun=8;HaplotypeScore=137.4416;InbreedingCoeff=0.8701;MQ=87.36;MQ0=2;MQRankSum=-0.745;QD=19.89;ReadPosRankSum=-3.084;VQSLOD=1.6145;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:32:29.58:0,30,144	0/0:8,0:8:17.98:0,18,180	0/0:23,2:24:28:0,28,532	0/0:32,0:31:37.28:0,37,552	0/0:21,0:21:57.16:0,57,676	0/0:19,0:19:57.17:0,57,688	0/0:28,0:28:72.20:0,72,857	0/0:19,0:19:16.96:0,17,65	0/0:28,0:28:63.19:0,63,757	0/0:25,0:25:63.17:0,63,738	0/0:19,0:19:54.17:0,54,651	0/0:41,0:41:99:0,114,1365	0/0:31,0:31:81.25:0,81,977	0/0:26,0:26:72.20:0,72,847	0/0:23,0:27:39.04:0,39,181	0/0:26,0:26:57.29:0,57,450	1/1:1,19:20:51.08:493,51,0	0/0:25,1:26:40.21:0,40,753	0/0:19,0:19:37.26:0,37,236	0/0:16,0:16:38.30:0,38,305	0/0:37,0:35:99:0,99,1152	0/0:24,0:24:61.54:0,62,455	0/0:18,0:18:54.02:0,54,619	0/0:30,0:30:81.24:0,81,968	0/0:18,0:19:23.19:0,23,95	0/0:15,0:16:29.23:0,29,172	0/0:13,0:16:17.62:0,18,93	0/0:2,0:2:5.36:0,5,21
chr10	5418901	.	G	GAGGGA	8600.17	PASS	AB=0.643;AC=13;AF=0.232;AN=56;BaseQRankSum=10.740;DP=664;FS=6.426;HRun=0;HaplotypeScore=164.0347;InbreedingCoeff=0.8924;MQ=86.87;MQ0=2;MQRankSum=-14.459;QD=61.87;ReadPosRankSum=-2.706;VQSLOD=4.6650;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,18:31:69.18:1806,69,0	0/0:8,0:8:21.05:0,21,362	0/0:27,0:26:68.83:0,69,1098	0/0:31,0:29:67.97:0,68,1219	0/0:21,0:21:63.16:0,63,1316	0/0:21,0:21:63.19:0,63,1351	0/0:26,0:26:75.25:0,75,1669	1/1:8,17:27:64.33:1234,64,0	0/0:23,0:23:66.22:0,66,1445	0/0:25,0:25:75.21:0,75,1492	0/0:19,0:19:57.18:0,57,1241	0/0:40,0:40:99:0,117,2585	0/0:28,0:28:81.05:0,81,1877	0/0:29,0:29:81.26:0,81,1732	1/1:7,18:25:75.16:1982,75,0	0/0:28,0:28:61.31:0,61,925	0/0:21,0:21:54.17:0,54,769	0/0:25,0:25:75.24:0,75,1631	0/0:19,0:19:23.93:0,24,427	0/0:19,0:19:37.97:0,38,490	0/0:38,0:36:99:0,111,2379	0/0:24,0:24:41.34:0,41,743	0/0:19,0:19:57.18:0,57,1234	0/0:34,0:34:93.27:0,93,1930	1/1:7,11:18:39.07:1043,39,0	0/1:8,10:18:88.05:1114,0,88	1/1:5,10:15:42.09:1135,42,0	1/1:3,2:5:12.04:286,12,0
chr10	5418958	.	GA	G	4126.65	PASS	AB=0.522;AC=13;AF=0.232;AN=56;BaseQRankSum=13.574;DP=682;FS=2.204;HRun=2;HaplotypeScore=94.9381;InbreedingCoeff=0.8986;MQ=76.22;MQ0=0;MQRankSum=-7.970;QD=30.12;ReadPosRankSum=0.207;VQSLOD=3.2051;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,27:28:69.16:873,69,0	0/0:8,0:8:24.06:0,24,321	0/0:39,0:39:99:0,111,1602	0/0:35,0:34:94.24:0,94,1346	0/0:24,0:24:72.24:0,72,1076	0/0:15,0:15:42.13:0,42,608	0/0:22,0:22:66.18:0,66,963	1/1:2,19:21:57.16:724,57,0	0/0:28,0:28:84.28:0,84,1257	0/0:23,0:23:69.22:0,69,1011	0/0:11,0:11:33.11:0,33,494	0/0:34,0:34:99:0,99,1475	0/0:30,0:30:90.29:0,90,1327	0/0:30,0:30:87.28:0,87,1284	1/1:1,23:24:54.18:699,54,0	0/0:27,0:27:78.22:0,78,1124	0/0:22,0:22:60.20:0,60,898	0/0:27,0:27:81.23:0,81,1152	0/0:21,0:21:60.18:0,60,830	0/0:19,0:19:54.18:0,54,809	0/0:52,0:52:99:0,156,2252	0/0:19,0:19:54.18:0,54,809	0/0:23,0:23:69.22:0,69,1012	0/0:36,0:36:99:0,108,1618	1/1:0,13:12:21.03:253,21,0	0/1:2,22:24:20.69:746,0,21	1/1:1,19:20:45.08:562,45,0	1/1:0,7:7:21.07:270,21,0
chr10	5419171	.	AGTAGACGTGC	A	6452.28	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=13.019;DP=664;FS=21.240;HRun=0;HaplotypeScore=202.6457;InbreedingCoeff=0.9770;MQ=83.19;MQ0=0;MQRankSum=-12.022;QD=67.92;ReadPosRankSum=0.328;VQSLOD=2.8822;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,13:16:15.05:442,15,0	0/0:11,0:11:33.11:0,33,1730	0/0:31,0:31:84.27:0,84,3532	0/0:23,0:23:46.66:0,47,1913	0/0:31,0:31:90.29:0,90,4560	0/0:21,0:20:60.21:0,60,3018	0/0:25,0:25:72.23:0,72,3589	1/1:0,15:15:42.02:1090,42,0	0/0:17,0:17:48.15:0,48,2298	0/0:35,0:35:99:0,102,4974	0/0:22,0:22:63.20:0,63,3180	0/0:31,0:31:90.30:0,90,4547	0/0:30,0:30:81.20:0,81,3684	0/0:36,0:36:99:0,108,5481	1/1:1,19:20:42.14:1398,42,0	0/0:39,0:39:99:0,108,5542	0/0:34,0:34:93.32:0,93,4832	0/0:16,0:16:45.15:0,45,2400	0/0:23,0:23:66.22:0,66,3153	0/0:21,0:21:63.22:0,63,3310	0/0:52,0:52:99:0,154,7804	0/0:20,0:20:60.21:0,60,3173	0/0:16,0:16:48.16:0,48,2508	0/0:35,0:35:99:0,102,5204	1/1:0,19:19:45.15:1497,45,0	1/1:0,15:14:39.11:1126,39,0	1/1:0,8:8:21.07:699,21,0	1/1:0,2:2:6.02:200,6,0
chr10	5419320	.	G	GAGCATGAC	1217.34	PASS	AB=0.667;AC=7;AF=0.140;AN=50;BaseQRankSum=2.954;DP=654;FS=1.091;HRun=0;HaplotypeScore=140.7499;InbreedingCoeff=0.6939;MQ=52.53;MQ0=15;MQRankSum=-5.655;QD=32.90;ReadPosRankSum=-0.865;VQSLOD=2.9658;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	0/0:13,0:13:36.10:0,36,873	0/0:27,0:5:15.05:0,15,379	0/0:31,0:8:17.99:0,18,279	0/0:29,0:29:75.23:0,75,1948	0/0:24,0:23:63.18:0,63,1495	0/0:25,0:23:54.19:0,54,1437	1/1:2,3:4:9.03:306,9,0	0/0:27,0:27:72.23:0,72,1915	0/0:20,0:21:60.18:0,60,1485	0/0:9,0:9:18.04:0,18,329	0/0:33,0:33:84.25:0,84,2123	0/0:42,0:42:99:0,120,3008	0/0:38,0:38:99:0,105,2660	./.	0/0:31,0:31:68.02:0,68,1687	0/0:33,0:31:67.96:0,68,1586	0/0:29,0:28:81.24:0,81,2095	0/0:10,0:9:21.06:0,21,522	0/0:19,0:19:45.10:0,45,935	0/0:56,0:56:99:0,153,3811	0/0:31,0:31:57.09:0,57,1001	0/0:26,0:26:66.01:0,66,1586	0/0:30,0:30:87.17:0,87,2112	1/1:0,14:13:3.01:130,3,0	0/1:8,8:14:99:731,0,138	./.	1/1:2,0:2:6.02:173,6,0
chr10	5420218	.	TCC	T	3863.83	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=12.269;DP=490;FS=7.442;HRun=8;HaplotypeScore=77.5065;InbreedingCoeff=0.9860;MQ=75.49;MQ0=1;MQRankSum=-1.664;QD=29.49;ReadPosRankSum=0.154;VQSLOD=3.3341;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,27:32:75.23:913,75,0	0/0:4,0:4:12.04:0,12,202	0/0:12,0:12:17.99:0,18,251	0/0:17,0:15:22.45:0,22,287	0/0:23,0:23:66.20:0,66,1081	0/0:23,0:23:66.23:0,66,1103	0/0:31,0:31:87.28:0,87,1444	1/1:4,20:24:51.14:610,51,0	0/0:18,0:18:54.18:0,54,907	0/0:20,0:20:60.19:0,60,964	0/0:16,0:16:45.15:0,45,758	0/0:18,0:18:51.07:0,51,819	0/0:22,0:22:63.22:0,63,1062	0/0:17,0:17:48.16:0,48,811	1/1:2,17:18:51.16:622,51,0	0/0:12,0:12:33.11:0,33,558	0/0:7,0:7:13.40:0,13,104	0/0:17,0:17:51.17:0,51,863	0/0:14,0:14:39.13:0,39,651	0/0:14,0:14:36.12:0,36,606	0/0:32,0:32:93.31:0,93,1539	0/0:13,0:13:39.13:0,39,656	0/0:18,0:18:47.88:0,48,811	0/0:10,0:10:24.04:0,24,375	1/1:1,11:12:24.07:293,24,0	1/1:1,19:20:57.18:694,57,0	1/1:1,16:17:42.13:512,42,0	1/1:0,7:7:18.06:219,18,0
chr10	5420714	.	G	GA	2621.75	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-11.810;DP=631;FS=4.072;HRun=6;HaplotypeScore=63.1459;InbreedingCoeff=0.9998;MQ=75.73;MQ0=0;MQRankSum=-3.451;QD=29.46;ReadPosRankSum=-0.083;VQSLOD=4.2692;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:48.11:0,48,489	0/0:14,0:14:36.08:0,36,367	0/0:17,0:17:39.41:0,39,456	0/0:27,0:26:55.11:0,55,566	0/0:32,0:32:87.20:0,87,887	0/0:35,0:35:96.20:0,96,972	0/0:12,0:12:33.07:0,33,336	0/0:34,0:34:84.15:0,84,836	0/0:17,0:17:39.09:0,39,398	0/0:32,0:32:84.19:0,84,857	0/0:27,0:27:75.17:0,75,764	0/0:21,0:21:63.13:0,63,636	0/0:15,0:15:42.09:0,42,428	0/0:16,0:16:48.10:0,48,484	0/0:19,0:19:54.12:0,54,551	1/1:3,25:28:47.64:913,48,0	0/0:27,0:27:78.18:0,78,795	0/0:25,0:25:63.14:0,63,643	1/1:3,14:17:42.13:528,42,0	1/1:2,19:21:54.13:661,54,0	0/0:14,0:14:36.08:0,36,367	1/1:3,20:23:54.17:679,54,0	0/0:15,0:15:36.05:0,36,353	0/0:20,0:20:54.09:0,54,543	0/0:24,0:24:63.14:0,63,643	0/0:29,0:29:84.18:0,84,851	0/0:36,0:36:96.20:0,96,972	0/0:15,0:15:45.10:0,45,459
chr10	5420870	.	GT	G	5224.87	PASS	AB=0.528;AC=13;AF=0.232;AN=56;BaseQRankSum=16.835;DP=608;FS=8.263;HRun=3;HaplotypeScore=77.7203;InbreedingCoeff=0.8974;MQ=82.86;MQ0=0;MQRankSum=-3.204;QD=32.86;ReadPosRankSum=1.178;VQSLOD=5.0287;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,17:18:48.15:595,48,0	0/0:7,0:7:21.07:0,21,302	0/0:19,0:19:57.16:0,57,777	0/0:26,0:26:78.15:0,78,1025	0/0:31,0:31:90.29:0,90,1278	0/0:31,0:31:90.30:0,90,1296	0/0:21,0:21:60.19:0,60,847	1/1:0,31:31:93.28:1141,93,0	0/0:24,0:24:69.23:0,69,993	0/0:25,0:25:75.25:0,75,1065	0/0:22,0:22:60.20:0,60,864	0/0:17,0:17:42.13:0,42,588	0/0:17,0:17:51.15:0,51,713	0/0:19,0:19:57.19:0,57,817	1/1:1,25:26:66.21:818,66,0	0/0:19,0:19:57.19:0,57,821	0/0:17,0:17:51.17:0,51,734	0/0:17,0:17:48:0,48,620	0/0:17,0:17:51.17:0,51,734	0/0:32,0:32:93.30:0,93,1320	0/0:14,0:14:42.13:0,42,587	0/0:33,0:33:99:0,99,1425	0/0:24,0:24:69.22:0,69,975	0/0:17,0:17:44.69:0,45,631	1/1:0,17:17:45.14:558,45,0	0/1:3,25:28:48.39:811,0,48	1/1:1,32:33:87.27:1078,87,0	1/1:0,6:6:18.06:223,18,0
chr10	5421698	.	CCATAATA	C	5585.07	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=4.332;DP=646;FS=10.948;HRun=0;HaplotypeScore=191.3978;InbreedingCoeff=0.9946;MQ=88.48;MQ0=0;MQRankSum=-12.098;QD=62.75;ReadPosRankSum=1.769;VQSLOD=3.8663;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:75.14:0,75,2427	0/0:8,0:8:17.98:0,18,616	0/0:24,0:24:72.23:0,72,2702	0/0:32,0:32:87.30:0,87,3327	0/0:28,0:28:78.27:0,78,3089	0/0:29,0:29:78.25:0,78,3024	0/0:21,0:21:57.20:0,57,2190	0/0:28,0:28:81.27:0,81,3070	0/0:19,0:19:57.20:0,57,2211	0/0:31,0:31:87.28:0,87,3327	0/0:12,0:12:30.09:0,30,1106	0/0:20,0:20:54.17:0,54,1979	0/0:23,0:23:66.23:0,66,2455	0/0:26,0:26:78.27:0,78,3117	0/0:25,0:25:63.16:0,63,2301	1/1:1,13:14:30.10:778,30,0	1/1:1,11:12:21.07:544,21,0	0/0:9,0:9:24.08:0,24,959	1/1:1,15:16:45.14:1116,45,0	1/1:2,19:21:54.18:1360,54,0	0/0:43,0:43:99:0,126,4837	1/1:1,25:26:69.24:1787,69,0	0/0:40,0:40:99:0,111,4058	0/0:17,0:17:51.18:0,51,2040	0/0:20,0:20:57.20:0,57,2182	0/0:26,0:26:63.22:0,63,2415	0/0:30,0:30:81.28:0,81,3165	0/0:13,0:13:18.06:0,18,717
chr10	5422143	.	TG	T	386.84	PASS	AB=0.956;AC=16;AF=0.286;AN=56;BaseQRankSum=-0.703;DP=439;FS=9.038;HRun=13;HaplotypeScore=95.6328;InbreedingCoeff=0.3902;MQ=78.28;MQ0=0;MQRankSum=-1.408;QD=2.10;ReadPosRankSum=1.979;VQSLOD=-0.5213;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:34,0:34:29.41:246,29,0	0/0:3,0:3:0:0,0,0	0/1:21,1:21:54.36:55,0,54	0/1:15,0:16:9.31:69,0,9	0/0:14,2:16:3:0,3,29	1/1:18,1:19:3.37:23,3,0	0/0:10,0:11:8.14:0,8,93	0/0:18,0:18:25.55:0,26,134	0/0:10,0:10:5.95:0,6,44	0/0:10,0:10:0:0,0,0	0/0:9,0:9:0:0,0,0	0/0:17,1:18:6.93:0,7,50	0/0:12,0:12:3.46:0,3,25	0/0:15,0:15:0.47:0,0,1	0/0:20,0:20:10.21:0,10,137	1/1:16,0:16:12.17:35,12,0	0/0:19,0:25:8.93:0,9,65	0/1:25,3:28:20.45:35,0,20	1/1:14,0:14:9.91:29,10,0	1/1:13,0:13:5.86:17,6,0	0/0:19,1:20:0.47:0,0,1	1/1:13,0:13:10.17:29,10,0	0/0:9,0:9:3:0,3,29	0/0:12,3:15:3:0,3,29	0/1:8,0:8:4.68:5,0,57	0/0:23,0:23:22.49:0,22,107	0/0:15,0:15:14.60:0,15,171	0/0:6,0:6:11.74:0,12,71
chr10	5422153	.	GGGGA	G	886.07	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=4.104;DP=398;FS=4.914;HRun=0;HaplotypeScore=99.9500;InbreedingCoeff=0.3895;MQ=82.31;MQ0=0;MQRankSum=-0.681;QD=6.33;ReadPosRankSum=-1.345;VQSLOD=1.9083;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:34,0:34:99:161,0,134	0/0:4,0:4:12.03:0,12,201	0/0:23,0:21:40.16:0,40,676	0/0:23,0:23:49.10:0,49,704	0/0:16,0:16:33:0,33,411	0/0:16,0:16:38.28:0,38,486	0/0:13,0:13:39.08:0,39,732	0/1:20,0:20:91.09:91,0,232	0/0:8,0:8:21.03:0,21,357	0/0:8,0:8:18:0,18,182	0/0:5,0:5:5.99:0,6,50	0/0:12,0:12:25.20:0,25,373	0/0:5,0:5:14.05:0,14,201	0/0:11,0:11:24.76:0,25,356	0/1:17,0:17:18.68:19,0,305	1/1:12,3:15:7.26:258,7,0	0/0:23,0:22:51.11:0,51,890	0/0:20,0:20:51.53:0,52,895	1/1:13,2:15:12.67:275,13,0	1/1:11,0:11:20.09:106,20,0	0/0:16,0:16:30.49:0,30,367	1/1:13,0:13:17.23:90,17,0	0/0:9,0:9:20.72:0,21,268	0/0:14,0:14:32.95:0,33,590	0/1:9,0:9:20.86:21,0,129	0/0:14,0:14:1.87:0,2,233	0/0:18,0:18:1.18:0,1,388	0/1:6,0:6:33.29:33,0,101
chr10	5422154	.	GGGA	G	1608.77	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=5.184;DP=395;FS=10.129;HRun=0;HaplotypeScore=89.9756;InbreedingCoeff=0.3842;MQ=83.60;MQ0=0;MQRankSum=-1.970;QD=9.58;ReadPosRankSum=-0.300;VQSLOD=2.4047;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:34,0:34:4.26:329,0,4	0/0:4,0:4:12.03:0,12,158	0/0:23,0:22:50.38:0,50,596	0/0:23,0:23:57.37:0,57,608	0/0:17,0:17:35.97:0,36,361	0/0:16,0:16:38.54:0,39,399	0/0:13,0:13:38.83:0,39,592	0/1:19,0:19:78.39:78,0,91	0/0:8,0:8:21.02:0,21,273	0/0:8,0:8:17.94:0,18,150	0/0:5,0:5:5.99:0,6,50	0/0:12,0:12:24.41:0,24,298	0/0:4,0:4:12.01:0,12,167	0/0:11,0:11:24.35:0,24,284	0/1:18,0:18:77.44:77,0,138	1/1:10,3:13:38.94:410,39,0	0/0:23,0:22:51.06:0,51,702	0/0:19,0:19:48.07:0,48,688	1/1:4,9:13:29.86:342,30,0	1/1:1,10:11:20.60:202,21,0	0/0:17,0:17:36.45:0,36,356	1/1:2,11:13:18.01:250,18,0	0/0:9,0:9:20.70:0,21,223	0/0:14,0:14:32.95:0,33,478	0/1:9,0:9:41.29:41,0,58	0/1:14,0:14:5.09:5,0,93	0/1:18,0:18:19.16:19,0,219	0/1:6,0:6:33.93:34,0,48
chr10	5422156	.	GA	G	2502.69	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=11.899;DP=386;FS=102.094;HRun=1;HaplotypeScore=72.6229;InbreedingCoeff=0.9522;MQ=84.49;MQ0=0;MQRankSum=-3.335;QD=15.35;ReadPosRankSum=5.094;VQSLOD=0.3250;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:12,19:31:86.93:906,87,0	0/0:4,0:4:11.97:0,12,95	0/0:25,0:23:44.33:0,44,490	0/0:22,0:22:18.38:0,18,389	0/0:17,0:17:38.90:0,39,322	0/0:17,0:17:36.52:0,37,280	0/0:14,0:14:41.92:0,42,390	1/1:18,0:18:38.16:233,38,0	0/0:6,0:6:14.96:0,15,128	0/0:8,0:8:17.94:0,18,149	0/0:3,0:3:5.98:0,6,50	0/0:12,0:12:23.02:0,23,194	0/0:5,0:5:11.92:0,12,103	0/0:10,0:10:23.74:0,24,173	1/1:17,1:18:40.73:262,41,0	1/1:13,0:13:38.47:263,38,0	0/0:20,0:19:44.94:0,45,388	0/0:19,0:19:37.65:0,38,337	1/1:13,0:13:29.48:232,29,0	1/1:10,0:10:20.36:115,20,0	0/0:18,0:18:38.95:0,39,322	1/1:13,0:13:17.61:106,18,0	0/0:9,0:9:23.68:0,24,190	0/0:14,0:14:32.84:0,33,274	1/1:8,1:9:7.12:117,7,0	1/1:14,0:14:40.64:237,41,0	1/1:16,2:18:22.06:172,22,0	1/1:6,0:6:13.14:80,13,0
chr10	5422184	.	AT	A	5501.06	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=12.639;DP=534;FS=26.282;HRun=2;HaplotypeScore=77.2004;InbreedingCoeff=0.9974;MQ=94.36;MQ0=0;MQRankSum=-4.570;QD=35.49;ReadPosRankSum=1.839;VQSLOD=2.9105;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,27:29:69.22:895,69,0	0/0:6,0:6:18.05:0,18,250	0/0:24,0:24:60.20:0,60,888	0/0:34,0:34:89.48:0,89,1239	0/0:24,0:24:72.24:0,72,1078	0/0:17,0:17:51.17:0,51,764	0/0:16,0:16:48.16:0,48,720	1/1:1,20:21:60.18:765,60,0	0/0:10,0:10:30.09:0,30,432	0/0:12,0:12:36.12:0,36,533	0/0:10,0:10:30.10:0,30,447	0/0:10,0:10:30.10:0,30,450	0/0:11,0:11:33.11:0,33,495	0/0:19,0:19:57.18:0,57,831	1/1:2,24:26:69.22:896,69,0	0/0:24,0:24:72.23:0,72,1053	0/0:25,0:24:63.15:0,63,897	0/0:21,0:21:57.17:0,57,831	0/0:23,0:23:66.20:0,66,952	0/0:18,0:18:51.13:0,51,737	0/0:25,0:25:75.20:0,75,1079	0/0:22,0:22:54.18:0,54,803	0/0:12,0:12:36.12:0,36,540	0/0:16,0:16:45.11:0,45,649	1/1:1,24:25:72.22:921,72,0	1/1:0,26:26:75.23:974,75,0	1/1:1,20:21:60.19:778,60,0	1/1:0,7:7:21.07:273,21,0
chr10	5423532	.	GTT	G	5456.40	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=12.059;DP=696;FS=1.507;HRun=8;HaplotypeScore=115.5064;InbreedingCoeff=0.9996;MQ=74.14;MQ0=0;MQRankSum=-7.169;QD=28.57;ReadPosRankSum=2.282;VQSLOD=4.4705;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,28:29:69.16:820,69,0	0/0:11,0:11:33.11:0,33,553	0/0:30,0:30:61.52:0,62,859	0/0:22,0:21:44.10:0,44,656	0/0:36,0:36:99:0,108,1685	0/0:34,0:34:93.31:0,93,1548	0/0:16,0:16:45.15:0,45,742	1/1:7,21:27:57.13:671,57,0	0/0:17,0:17:45.15:0,45,761	0/0:26,0:26:72.23:0,72,1141	0/0:17,0:17:51.17:0,51,839	0/0:30,0:30:81.26:0,81,1316	0/0:24,0:24:72.22:0,72,1166	0/0:28,0:28:78.27:0,78,1318	1/1:5,34:39:86.88:1041,87,0	0/0:0,0:39:99:0,105,1019	0/0:9,0:9:27.07:0,27,407	0/0:14,0:14:42.14:0,42,692	0/0:7,0:22:41.65:0,42,384	0/0:4,0:37:99:0,105,990	0/0:25,0:25:65.02:0,65,1035	0/0:2,0:19:46.66:0,47,403	0/0:19,0:19:54.18:0,54,889	0/0:27,0:27:72.22:0,72,1167	1/1:2,21:23:57.17:694,57,0	1/1:3,27:30:78.24:950,78,0	1/1:1,30:31:78.24:950,78,0	1/1:0,11:11:27.08:329,27,0
chr10	5423817	.	GATT	G	217.88	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.134;DP=704;FS=23.941;HRun=0;HaplotypeScore=144.1924;InbreedingCoeff=0.9969;MQ=65.44;MQ0=1;MQRankSum=-4.982;QD=14.53;ReadPosRankSum=0.987;VQSLOD=1.8031;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,10:15:27.02:312,27,0	0/0:14,0:14:42.14:0,42,993	0/0:27,0:21:57.20:0,57,1322	0/0:27,0:27:68.79:0,69,1509	0/0:41,0:41:99:0,117,2674	0/0:33,0:33:99:0,99,2327	0/0:19,0:19:57.20:0,57,1348	0/0:44,0:44:99:0,132,2988	0/0:20,0:20:60.21:0,60,1393	0/0:36,0:36:99:0,105,2399	0/0:17,0:17:51.18:0,51,1199	0/0:22,0:22:63.22:0,63,1487	0/0:21,0:21:63.22:0,63,1483	0/0:21,0:21:63.20:0,63,1432	0/0:21,0:21:42.01:0,42,790	0/0:23,0:23:69.24:0,69,1619	0/0:30,0:30:90.28:0,90,2060	0/0:19,0:19:57.20:0,57,1336	0/0:19,0:19:51.17:0,51,1182	0/0:32,0:32:93.32:0,93,2173	0/0:28,0:28:84.29:0,84,1972	0/0:40,0:40:99:0,120,2712	0/0:27,0:27:81.21:0,81,1807	0/0:18,0:18:51.17:0,51,1197	0/0:24,0:24:66.18:0,66,1468	0/0:30,0:30:87.30:0,87,2035	0/0:27,0:27:81.23:0,81,1810	0/0:9,0:9:24.08:0,24,567
chr10	5423825	.	ATAG	A	94.78	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.860;DP=696;FS=20.997;HRun=0;HaplotypeScore=143.2672;InbreedingCoeff=0.9957;MQ=65.89;MQ0=0;MQRankSum=-4.414;QD=9.48;ReadPosRankSum=0.951;VQSLOD=1.4831;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,10:10:23.93:188,24,0	0/0:15,0:15:45.15:0,45,1062	0/0:28,0:26:75.26:0,75,1724	0/0:30,0:30:80.83:0,81,1712	0/0:40,0:40:99:0,114,2674	0/0:33,0:33:99:0,99,2294	0/0:19,0:19:57.20:0,57,1342	0/0:45,0:45:99:0,135,3053	0/0:21,0:21:63.22:0,63,1462	0/0:32,0:32:96.33:0,96,2262	0/0:17,0:17:51.18:0,51,1185	0/0:22,0:22:63.20:0,63,1426	0/0:20,0:20:60.21:0,60,1355	0/0:17,0:17:51.18:0,51,1189	0/0:20,0:20:36.11:0,36,793	0/0:22,0:22:66.23:0,66,1561	0/0:31,0:31:93.28:0,93,2101	0/0:21,0:21:60.21:0,60,1382	0/0:22,0:22:66.23:0,66,1519	0/0:31,0:31:93.32:0,93,2199	0/0:30,0:30:87.30:0,87,2031	0/0:38,0:38:99:0,111,2476	0/0:27,0:27:78.27:0,78,1824	0/0:13,0:13:39.13:0,39,899	0/0:24,0:24:72.25:0,72,1688	0/0:30,0:30:90.31:0,90,2111	0/0:29,0:29:84.27:0,84,1906	0/0:9,0:9:24.08:0,24,547
chr10	5423890	.	T	TG	11880.88	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-0.702;DP=672;FS=0.918;HRun=2;HaplotypeScore=76.9625;InbreedingCoeff=0.9734;MQ=74.73;MQ0=0;MQRankSum=-5.307;QD=38.33;ReadPosRankSum=1.289;VQSLOD=5.4315;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,34:34:90.26:1271,90,0	0/0:5,0:5:15.05:0,15,186	0/0:33,0:33:96.28:0,96,1151	0/0:22,0:21:57.12:0,57,671	0/0:39,0:39:99:0,111,1376	0/0:30,0:30:84.24:0,84,1017	0/0:20,0:20:60.17:0,60,730	1/1:2,33:35:93.25:1280,93,0	0/0:15,0:15:45.13:0,45,544	0/0:31,0:31:87.24:0,87,1052	0/0:23,0:23:63.20:0,63,781	0/0:20,0:20:57.18:0,57,707	0/0:20,0:20:60.19:0,60,744	0/0:16,0:16:48.15:0,48,595	1/1:1,21:22:57.19:820,57,0	1/1:1,25:26:69.23:994,69,0	1/1:0,19:19:57.16:798,57,0	0/0:19,0:19:48.11:0,48,566	1/1:2,21:23:63.21:906,63,0	1/1:0,33:33:93.31:1339,93,0	0/0:30,0:30:87.26:0,87,1064	1/1:0,29:29:84.28:1210,84,0	0/0:21,0:21:63.20:0,63,781	0/0:18,0:18:54.17:0,54,669	1/1:2,27:29:81.27:1166,81,0	1/1:3,29:32:87.28:1234,87,0	1/1:3,20:23:57.19:819,57,0	1/1:3,2:5:3.01:43,3,0
chr10	5424033	.	G	GA	5971.67	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=9.787;DP=678;FS=0.000;HRun=0;HaplotypeScore=117.3730;InbreedingCoeff=0.9675;MQ=70.36;MQ0=0;MQRankSum=-2.635;QD=40.35;ReadPosRankSum=0.117;VQSLOD=4.2283;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,21:21:48.16:766,48,0	0/0:10,0:10:30.08:0,30,401	0/0:35,0:31:87.03:0,87,1142	0/0:35,0:35:99:0,105,1422	0/0:18,0:18:54.18:0,54,755	0/0:23,0:23:66.20:0,66,904	0/0:24,0:24:72.22:0,72,989	1/1:1,30:30:72.20:1071,72,0	0/0:23,0:23:69.23:0,69,963	0/0:24,0:24:72.20:0,72,983	0/0:23,0:23:65.84:0,66,901	0/0:29,0:29:87.25:0,87,1178	0/0:16,0:16:48.16:0,48,670	0/0:23,0:23:66.21:0,66,900	1/1:3,25:28:78.27:1236,78,0	0/0:17,0:17:51.17:0,51,711	0/0:38,0:39:69.59:0,70,1525	0/0:31,0:31:90.26:0,90,1222	0/0:33,0:33:93.31:0,93,1300	0/0:26,0:26:72.24:0,72,1004	0/0:37,0:37:99:0,108,1503	0/0:20,0:20:60.17:0,60,812	0/0:16,0:16:48.16:0,48,668	0/0:28,0:28:81.74:0,82,1133	1/1:0,12:12:30.10:478,30,0	1/1:3,25:28:42.28:1215,42,0	1/1:1,24:25:75.21:1157,75,0	1/1:1,1:2:3.01:48,3,0
chr10	5424081	.	ATTGCTTGTCC	A	7483.41	PASS	AB=0.537;AC=13;AF=0.232;AN=56;BaseQRankSum=11.727;DP=687;FS=1.427;HRun=0;HaplotypeScore=230.6714;InbreedingCoeff=0.8663;MQ=59.90;MQ0=3;MQRankSum=-11.742;QD=58.01;ReadPosRankSum=1.543;VQSLOD=4.6875;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,18:22:30.09:913,30,0	0/0:15,0:15:45.15:0,45,2385	0/0:30,0:23:63.22:0,63,2738	0/0:36,0:34:93.25:0,93,4099	0/0:20,0:20:60.21:0,60,3179	0/0:26,0:26:78.27:0,78,4091	0/0:28,0:28:84.29:0,84,4247	1/1:9,17:26:42.14:1330,42,0	0/0:29,0:29:81.28:0,81,4072	0/0:24,0:24:72.25:0,72,3536	0/0:25,0:25:75.26:0,75,3812	0/0:21,0:21:63.22:0,63,3230	0/0:19,0:19:54.19:0,54,2737	0/0:25,0:25:75.26:0,75,3741	1/1:8,22:30:57.20:1792,57,0	0/0:22,0:22:60.21:0,60,2542	0/0:29,0:29:87.30:0,87,3466	0/0:40,0:40:99:0,117,5755	0/0:20,0:20:60.21:0,60,2492	0/0:26,0:26:78.27:0,78,3289	0/0:29,0:29:78.27:0,78,3850	0/0:28,0:28:78.27:0,78,3408	0/0:25,0:25:72.25:0,72,3790	0/0:41,0:41:99:0,111,5836	1/1:0,4:4:6.02:198,6,0	0/1:3,19:22:98.84:1674,0,99	1/1:5,15:20:39.13:1281,39,0	1/1:1,3:4:9.03:297,9,0
chr10	5424191	.	A	AAAAC	6109.70	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=0.047;DP=684;FS=3.129;HRun=0;HaplotypeScore=119.5902;InbreedingCoeff=0.9651;MQ=72.90;MQ0=3;MQRankSum=-3.184;QD=38.67;ReadPosRankSum=0.658;VQSLOD=4.7382;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,18:24:39.07:890,39,0	0/0:8,0:8:21.07:0,21,350	0/0:36,0:26:17.02:0,17,383	0/0:30,0:23:22.11:0,22,336	0/0:30,0:30:72.21:0,72,1113	0/0:21,0:21:51.16:0,51,830	0/0:24,0:24:66.21:0,66,1082	1/1:11,10:24:29.97:422,30,0	0/0:30,0:30:75.23:0,75,1210	0/0:27,0:27:63.18:0,63,1002	0/0:31,0:31:81.26:0,81,1333	0/0:23,0:23:48.16:0,48,781	0/0:22,0:22:51.16:0,51,814	0/0:26,0:26:66.20:0,66,1057	1/1:7,17:24:45.15:1112,45,0	0/0:16,0:16:42.14:0,42,701	0/0:28,0:28:60.13:0,60,911	0/0:23,0:23:42.07:0,42,613	0/0:29,0:29:66.18:0,66,1051	0/0:30,0:30:66.23:0,66,1109	0/0:7,0:7:18.05:0,18,279	0/0:31,0:31:69.22:0,69,1129	0/0:31,0:31:75.23:0,75,1211	0/0:23,0:23:57.18:0,57,933	1/1:6,14:22:33.11:816,33,0	1/1:7,17:24:3.77:1184,4,0	1/1:8,19:31:51.17:1242,51,0	1/1:1,5:7:18.06:444,18,0
chr10	5424553	.	A	AC	7676.88	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-14.270;DP=674;FS=0.325;HRun=0;HaplotypeScore=70.7703;InbreedingCoeff=0.9998;MQ=79.88;MQ0=0;MQRankSum=-1.357;QD=43.62;ReadPosRankSum=0.546;VQSLOD=5.2033;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,23:23:66.23:1053,66,0	0/0:16,0:16:42.14:0,42,587	0/0:27,0:27:81.27:0,81,1117	0/0:20,0:20:57.16:0,57,751	0/0:27,0:27:75.18:0,75,1047	0/0:24,0:24:72.24:0,72,1006	0/0:18,0:18:54.14:0,54,704	1/1:1,25:26:75.24:1178,75,0	0/0:24,0:24:72.23:0,72,990	0/0:34,0:34:99:0,102,1414	0/0:19,0:19:57.18:0,57,780	0/0:22,0:22:66.21:0,66,908	0/0:25,0:25:75.25:0,75,1049	0/0:25,0:25:75.25:0,75,1049	1/1:0,29:29:72.25:1151,72,0	0/0:32,0:32:96.28:0,96,1291	0/0:31,0:31:90.27:0,90,1238	0/0:22,0:22:66.22:0,66,923	0/0:10,0:10:30.10:0,30,418	0/0:38,0:38:99:0,114,1572	0/0:14,0:14:39.13:0,39,546	0/0:28,0:28:81.23:0,81,1111	0/0:22,0:22:66.22:0,66,920	0/0:20,0:20:57.17:0,57,778	1/1:0,17:17:51.17:815,51,0	1/1:2,37:39:66.38:1612,66,0	1/1:1,29:30:84.29:1342,84,0	1/1:0,12:12:33.11:528,33,0
chr10	5425405	.	AT	A	798.05	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=0.946;DP=642;FS=0.000;HRun=2;HaplotypeScore=93.7570;InbreedingCoeff=0.8987;MQ=61.85;MQ0=0;MQRankSum=-1.441;QD=31.92;ReadPosRankSum=2.342;VQSLOD=3.4035;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:60.18:0,60,859	0/0:6,0:6:18.06:0,18,270	0/0:31,0:28:81.27:0,81,1192	0/0:20,0:19:53.67:0,54,777	0/0:43,0:43:99:0,129,1930	0/0:14,0:14:42.14:0,42,630	0/0:22,0:22:63.20:0,63,923	0/0:33,0:33:96.29:0,96,1353	0/0:18,0:18:54.18:0,54,809	0/0:27,0:27:81.23:0,81,1172	0/0:23,0:23:69.23:0,69,1033	0/0:23,0:23:68.25:0,68,974	0/0:22,0:22:66.22:0,66,989	0/0:25,0:25:75.24:0,75,1104	0/0:26,0:26:78.25:0,78,1140	0/0:24,0:24:69.23:0,69,1023	1/1:0,25:25:69.22:893,69,0	0/0:17,0:17:51.17:0,51,764	0/0:16,0:16:42.14:0,42,629	0/0:30,0:30:87.29:0,87,1272	0/0:32,0:32:96.28:0,96,1360	0/0:20,0:20:60.16:0,60,873	0/0:23,0:23:69.23:0,69,1034	0/0:15,0:15:42.10:0,42,604	0/0:23,0:23:69.21:0,69,969	0/0:36,0:36:99:0,105,1520	0/0:26,0:26:72.22:0,72,1042	0/0:2,0:2:6.02:0,6,90
chr10	5425882	.	C	CA	2456.63	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-9.820;DP=547;FS=2.268;HRun=4;HaplotypeScore=49.5461;InbreedingCoeff=0.9991;MQ=63.03;MQ0=0;MQRankSum=1.183;QD=34.60;ReadPosRankSum=-1.426;VQSLOD=3.5473;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:57.16:0,57,646	0/0:12,0:12:36.10:0,36,408	0/0:11,0:11:33.09:0,33,372	0/0:12,0:12:24.07:0,24,272	0/0:15,0:15:45.13:0,45,509	0/0:16,0:16:45.13:0,45,510	0/0:25,0:25:69.18:0,69,772	0/0:20,0:20:54.14:0,54,605	0/0:24,0:24:69.20:0,69,782	0/0:28,0:28:84.24:0,84,953	0/0:19,0:19:45.13:0,45,510	0/0:20,0:20:51.13:0,51,570	0/0:21,0:21:60.17:0,60,681	0/0:28,0:28:75.21:0,75,850	0/0:24,0:24:69.20:0,69,783	1/1:0,24:24:72.24:985,72,0	0/0:28,0:28:72.15:0,72,790	0/0:23,0:23:54.15:0,54,612	1/1:0,17:17:48.16:654,48,0	1/1:1,17:18:42.14:568,42,0	0/0:13,0:13:39.11:0,39,442	1/1:1,11:12:30.10:410,30,0	0/0:23,0:23:63.18:0,63,715	0/0:21,0:21:63.18:0,63,714	0/0:17,0:17:45.13:0,45,510	0/0:20,0:20:54.15:0,54,613	0/0:26,0:26:69.20:0,69,782	0/0:11,0:11:33.09:0,33,374
chr10	5425998	.	GC	G	5187.97	PASS	AB=0.528;AC=13;AF=0.232;AN=56;BaseQRankSum=16.058;DP=648;FS=9.694;HRun=3;HaplotypeScore=97.1768;InbreedingCoeff=0.8954;MQ=83.28;MQ0=0;MQRankSum=-5.532;QD=31.83;ReadPosRankSum=0.294;VQSLOD=4.1225;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,42:44:99:1292,108,0	0/0:5,0:5:15.05:0,15,216	0/0:18,0:18:39.20:0,39,676	0/0:28,0:28:78.25:0,78,1062	0/0:23,0:23:63.19:0,63,867	0/0:24,0:24:72.24:0,72,1036	0/0:24,0:24:72.24:0,72,1037	1/1:1,17:18:48.12:552,48,0	0/0:22,0:22:63.21:0,63,906	0/0:25,0:25:72.24:0,72,1035	0/0:15,0:15:45.15:0,45,645	0/0:30,0:30:84.27:0,84,1191	0/0:24,0:24:66.22:0,66,947	0/0:29,0:29:87.28:0,87,1235	1/1:0,29:29:87.27:1039,87,0	0/0:23,0:23:69.22:0,69,940	0/0:34,0:34:99:0,99,1366	0/0:18,0:18:48.12:0,48,651	0/0:22,0:22:63.12:0,63,798	0/0:29,0:29:78.23:0,78,1038	0/0:25,0:25:72.22:0,72,1016	0/0:18,0:18:51.16:0,51,698	0/0:18,0:18:48.15:0,48,672	0/0:31,0:31:84.27:0,84,1193	1/1:0,15:15:45.14:540,45,0	0/1:2,17:19:32.26:521,0,32	1/1:0,29:29:87.24:1029,87,0	1/1:3,6:9:18.05:216,18,0
chr10	5426262	.	TG	T	4631.15	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=13.015;DP=610;FS=7.335;HRun=1;HaplotypeScore=104.3045;InbreedingCoeff=0.9995;MQ=68.07;MQ0=1;MQRankSum=-9.989;QD=35.08;ReadPosRankSum=-0.538;VQSLOD=4.0162;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,28:28:72.17:959,72,0	0/0:9,0:9:27.04:0,27,359	0/0:28,0:26:71.23:0,71,1078	0/0:19,0:18:27.45:0,27,566	0/0:17,0:17:48.16:0,48,765	0/0:27,0:27:81.28:0,81,1288	0/0:25,0:25:75.21:0,75,1128	1/1:0,19:19:45.04:550,45,0	0/0:22,0:22:66.18:0,66,984	0/0:32,0:32:93.31:0,93,1463	0/0:17,0:17:51.17:0,51,814	0/0:30,0:30:90.29:0,90,1413	0/0:33,0:33:99:0,99,1551	0/0:26,0:26:75.24:0,75,1159	1/1:0,22:22:60.16:811,60,0	0/0:22,0:22:66.20:0,66,1006	0/0:28,0:28:81.16:0,81,1211	0/0:18,0:18:54.18:0,54,862	0/0:31,0:31:73.58:0,74,1336	0/0:12,0:12:36.12:0,36,572	0/0:27,0:27:57.35:0,57,1197	0/0:14,0:14:42.14:0,42,666	0/0:19,0:19:57.14:0,57,836	0/0:22,0:22:66.21:0,66,1028	1/1:0,10:10:30.05:395,30,0	1/1:0,23:23:63.10:811,63,0	1/1:0,17:17:45.15:626,45,0	1/1:0,13:13:38.12:479,38,0
chr10	5426357	.	G	GGTC	6928.45	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=11.242;DP=504;FS=7.633;HRun=0;HaplotypeScore=88.9922;InbreedingCoeff=0.9945;MQ=91.29;MQ0=0;MQRankSum=-11.854;QD=58.72;ReadPosRankSum=-0.365;VQSLOD=6.1709;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,18:21:57.15:1346,57,0	0/0:12,0:12:36.11:0,36,638	0/0:18,0:19:49.87:0,50,819	0/0:28,0:28:81.27:0,81,1414	0/0:20,0:20:60.20:0,60,1089	0/0:21,0:21:63.20:0,63,1110	0/0:19,0:19:54.17:0,54,962	1/1:4,5:10:24.06:506,24,0	0/0:22,0:22:66.23:0,66,1215	0/0:16,0:16:45.15:0,45,821	0/0:15,0:15:39.13:0,39,715	0/0:18,0:18:51.17:0,51,950	0/0:23,0:23:69.23:0,69,1257	0/0:22,0:22:66.22:0,66,1189	1/1:1,9:10:24.08:590,24,0	0/0:13,0:13:39.13:0,39,727	1/1:2,31:34:87.77:2140,88,0	0/0:25,0:25:72.22:0,72,1287	0/0:17,0:17:45.11:0,45,796	0/0:10,0:10:30.10:0,30,547	0/0:35,0:35:99:0,105,1954	0/0:9,0:9:24.08:0,24,447	0/0:15,0:15:45.15:0,45,827	0/0:27,0:27:81.28:0,81,1510	1/1:2,17:20:42.14:1025,42,0	1/1:3,6:9:24.04:534,24,0	1/1:1,6:7:15.05:368,15,0	1/1:3,4:7:18.06:419,18,0
chr10	5426444	.	T	TTTTA	2770.05	PASS	AB=0.593;AC=7;AF=0.125;AN=56;BaseQRankSum=2.288;DP=578;FS=0.000;HRun=0;HaplotypeScore=145.4581;InbreedingCoeff=0.8319;MQ=70.07;MQ0=0;MQRankSum=-5.642;QD=41.34;ReadPosRankSum=-0.694;VQSLOD=3.2170;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,120,1961	0/0:8,0:8:24.08:0,24,407	0/0:21,0:21:22.10:0,22,402	0/0:16,0:16:36.10:0,36,582	0/0:19,0:19:48.15:0,48,784	0/0:24,0:24:63.21:0,63,1028	0/0:16,0:16:42.12:0,42,656	0/0:34,0:34:75.19:0,75,1165	0/0:19,0:19:42.14:0,42,713	0/0:29,0:29:72.25:0,72,1219	0/0:27,0:27:75.24:0,75,1222	0/0:9,0:9:18.06:0,18,305	0/0:18,0:18:42.14:0,42,713	0/0:22,0:22:48.16:0,48,815	0/0:13,0:13:33.07:0,33,506	0/1:5,9:16:65.70:691,0,66	0/0:22,0:22:60.21:0,60,1017	0/0:21,0:21:54.18:0,54,908	1/1:16,5:22:24.08:551,24,0	1/1:2,13:16:39.13:930,39,0	0/0:20,0:20:45.12:0,45,694	1/1:2,10:13:30.10:746,30,0	0/0:20,0:20:60.18:0,60,967	0/0:17,0:17:42.11:0,42,675	0/0:30,0:30:81.15:0,81,1267	0/0:19,0:19:45.15:0,45,759	0/0:22,0:22:57.20:0,57,967	0/0:13,0:13:30.10:0,30,497
chr10	5426569	.	GAGATA	G	5291.92	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=13.406;DP=577;FS=2.006;HRun=0;HaplotypeScore=133.6942;InbreedingCoeff=0.9924;MQ=84.27;MQ0=0;MQRankSum=-14.233;QD=46.83;ReadPosRankSum=-0.892;VQSLOD=4.8584;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,20:29:51.17:1086,51,0	0/0:11,0:11:33.11:0,33,1047	0/0:17,0:17:48.16:0,48,1440	0/0:21,0:22:51.18:0,51,1488	0/0:32,0:32:96.33:0,96,2965	0/0:22,0:22:63.20:0,63,1928	0/0:23,0:23:66.23:0,66,2043	1/1:4,21:25:63.22:1342,63,0	0/0:31,0:31:78.27:0,78,2434	0/0:23,0:23:60.21:0,60,1903	0/0:27,0:27:78.27:0,78,2474	0/0:22,0:22:66.23:0,66,2080	0/0:24,0:24:72.25:0,72,2199	0/0:16,0:16:45.09:0,45,1226	1/1:0,13:13:24.08:521,24,0	0/0:18,0:18:45.12:0,45,1353	0/0:19,0:19:54.19:0,54,1675	0/0:20,0:20:57.15:0,57,1689	0/0:17,0:17:48.16:0,48,1484	0/0:21,0:21:60.21:0,60,1896	0/0:42,0:42:99:0,123,3894	0/0:11,0:11:33.07:0,33,928	0/0:20,0:20:60.21:0,60,1903	0/0:26,0:26:78.22:0,78,2364	1/1:0,16:16:42.14:911,42,0	1/1:2,13:15:36.12:781,36,0	1/1:0,10:10:18.06:390,18,0	1/1:0,5:5:12.04:260,12,0
chr10	5427210	.	A	AG	9690.88	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=12.094;DP=757;FS=4.173;HRun=5;HaplotypeScore=111.5473;InbreedingCoeff=0.9915;MQ=72.83;MQ0=0;MQRankSum=-7.806;QD=32.85;ReadPosRankSum=1.046;VQSLOD=4.1546;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,45:48:99:1557,114,0	0/0:16,0:16:47.35:0,47,517	0/0:21,0:21:57.16:0,57,638	0/0:19,0:20:27.53:0,28,477	0/0:29,0:29:78.22:0,78,883	0/0:22,0:22:66.17:0,66,739	0/0:26,0:26:72.19:0,72,807	1/1:32,0:32:95.01:665,95,0	0/0:20,0:20:60.17:0,60,680	0/0:26,0:26:66.17:0,66,740	0/0:21,0:21:60.17:0,60,680	0/0:40,0:40:99:0,120,1350	0/0:28,0:28:75.21:0,75,850	0/0:26,0:26:75.21:0,75,849	1/1:1,34:35:90.30:1231,90,0	1/1:2,22:24:60.20:821,60,0	0/0:41,0:40:99:0,114,1258	0/0:30,0:30:87.25:0,87,987	1/1:5,20:25:49.04:792,49,0	1/1:1,21:22:57.19:778,57,0	0/0:41,0:41:99:0,105,1190	1/1:3,23:26:57.19:779,57,0	0/0:30,0:30:87.21:0,87,972	0/0:25,0:25:72.21:0,72,816	1/1:0,19:19:51.17:695,51,0	1/1:1,25:26:75.25:1018,75,0	1/1:4,31:35:90.16:1230,90,0	1/1:0,3:3:9.03:123,9,0
chr10	5427211	.	G	GA	4675.86	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=19.277;DP=758;FS=3.645;HRun=1;HaplotypeScore=130.1644;InbreedingCoeff=0.8966;MQ=72.74;MQ0=0;MQRankSum=-3.042;QD=15.59;ReadPosRankSum=2.830;VQSLOD=5.2409;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:48,0:48:91.96:603,92,0	0/0:16,0:16:48.16:0,48,658	0/0:22,0:22:57.19:0,57,776	0/0:20,0:20:58.80:0,59,733	0/0:29,0:29:81.25:0,81,1112	0/0:22,0:22:66.22:0,66,919	0/0:24,0:24:72.24:0,72,1003	1/1:4,32:36:99:1585,102,0	0/0:20,0:20:60.20:0,60,839	0/0:26,0:26:75.23:0,75,1004	0/0:21,0:21:63.20:0,63,863	0/0:40,0:40:99:0,120,1671	0/0:27,0:27:81.24:0,81,1097	0/0:26,0:26:78.25:0,78,1074	1/1:35,0:35:45.01:399,45,0	1/1:23,0:23:34.34:269,34,0	0/0:40,0:39:99:0,120,1633	0/0:30,0:30:90.26:0,90,1236	0/1:26,0:26:44.95:213,0,45	1/1:22,0:22:54.95:306,55,0	0/0:41,0:41:99:0,120,1565	1/1:26,0:26:32.49:255,32,0	0/0:30,0:30:90.29:0,90,1240	0/0:24,0:24:72.24:0,72,1007	1/1:20,0:20:48.61:251,49,0	1/1:26,0:26:47.14:362,47,0	1/1:35,0:35:5.31:386,5,0	1/1:3,0:3:8.69:48,9,0
chr10	5427857	.	GA	G	11912.76	PASS	AB=0.529;AC=21;AF=0.375;AN=56;BaseQRankSum=17.969;DP=761;FS=15.239;HRun=2;HaplotypeScore=84.6065;InbreedingCoeff=0.9217;MQ=92.76;MQ0=0;MQRankSum=-3.311;QD=35.67;ReadPosRankSum=2.198;VQSLOD=3.7366;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,51:52:99:1909,147,0	0/0:13,0:13:39.13:0,39,583	0/0:38,0:38:99:0,111,1582	0/0:29,0:28:83.31:0,83,1209	0/0:22,0:22:63.17:0,63,918	0/0:13,0:13:39.13:0,39,585	0/0:21,0:21:63.21:0,63,944	1/1:1,39:40:99:1460,117,0	0/0:21,0:21:63.21:0,63,944	0/0:34,0:34:99:0,99,1483	0/0:15,0:15:45.15:0,45,674	0/0:23,0:23:69.23:0,69,1034	0/0:30,0:30:90.30:0,90,1348	0/0:28,0:28:84.28:0,84,1258	1/1:0,29:29:84.27:1091,84,0	1/1:0,26:26:66.21:857,66,0	0/0:35,0:35:99:0,105,1553	0/0:29,0:29:87.29:0,87,1304	1/1:0,22:22:66.20:842,66,0	1/1:0,32:32:93.30:1207,93,0	0/0:20,0:20:60.20:0,60,899	1/1:1,35:36:96.31:1247,96,0	0/0:33,0:33:99:0,99,1482	0/0:23,0:23:66.22:0,66,989	1/1:0,31:31:90.29:1168,90,0	0/1:3,24:27:14.73:808,0,15	1/1:1,34:35:90.29:1168,90,0	1/1:0,4:4:12.04:156,12,0
chr10	5428157	.	T	TA	4161.05	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=6.523;DP=741;FS=7.732;HRun=0;HaplotypeScore=105.6929;InbreedingCoeff=0.9796;MQ=86.59;MQ0=0;MQRankSum=-2.102;QD=46.23;ReadPosRankSum=-1.510;VQSLOD=2.0478;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,156,2159	0/0:17,0:17:51.17:0,51,713	0/0:24,0:24:66.20:0,66,882	0/0:24,0:24:69.20:0,69,944	0/0:22,0:22:66.21:0,66,904	0/0:17,0:17:51.17:0,51,713	0/0:35,0:35:99:0,105,1433	1/1:0,31:31:93.29:1439,93,0	0/0:23,0:23:69.23:0,69,963	0/0:31,0:31:90.29:0,90,1230	0/0:18,0:18:54.18:0,54,752	0/0:33,0:33:99:0,99,1348	0/0:31,0:31:93.30:0,93,1284	0/0:25,0:25:75.24:0,75,1032	1/1:1,40:41:99:1870,117,0	0/0:19,0:19:57.19:0,57,797	0/0:34,0:34:99:0,102,1406	0/0:18,0:18:54.15:0,54,734	0/0:18,0:18:51.14:0,51,678	0/0:32,0:32:93.30:0,93,1283	0/0:29,0:29:84.25:0,84,1138	0/0:21,0:21:63.20:0,63,866	0/0:23,0:23:69.02:0,69,935	0/0:38,0:38:99:0,114,1593	1/1:0,18:18:54.18:852,54,0	0/0:23,0:23:69.22:0,69,951	0/0:39,0:39:99:0,114,1594	0/0:3,0:3:9.03:0,9,126
chr10	5428846	.	GT	G	10082.45	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=20.335;DP=698;FS=0.901;HRun=3;HaplotypeScore=94.7289;InbreedingCoeff=0.9905;MQ=64.98;MQ0=1;MQRankSum=-2.546;QD=35.13;ReadPosRankSum=0.489;VQSLOD=4.9616;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,31:31:90.29:1168,90,0	0/0:8,0:8:21.07:0,21,315	0/0:22,0:21:44.61:0,45,801	0/0:14,0:14:42.13:0,42,587	0/0:33,0:33:96.32:0,96,1409	0/0:31,0:31:93.31:0,93,1372	0/0:19,0:19:57.18:0,57,830	1/1:0,26:26:78.24:990,78,0	0/0:20,1:21:24.26:0,24,854	0/0:35,0:35:99:0,102,1513	0/0:22,0:22:63.19:0,63,901	0/0:23,0:23:63.21:0,63,944	0/0:28,0:28:84.28:0,84,1255	0/0:29,0:29:87.28:0,87,1265	1/1:0,31:31:81.26:1052,81,0	1/1:1,20:21:9.20:617,9,0	0/0:34,0:34:99:0,99,1483	0/0:30,0:30:87.29:0,87,1301	1/1:1,26:27:78.25:1010,78,0	1/1:1,36:37:99:1279,99,0	0/0:24,0:24:72.23:0,72,1052	1/1:0,21:21:60.19:775,60,0	0/0:21,0:21:63.21:0,63,943	0/0:17,0:17:48.16:0,48,719	1/1:0,22:22:54.18:700,54,0	1/1:1,33:34:54.31:1167,54,0	1/1:0,28:28:81.26:1051,81,0	1/1:0,9:9:21.07:273,21,0
chr10	5429082	.	A	AG	8249.95	PASS	AB=0.550;AC=21;AF=0.375;AN=56;BaseQRankSum=9.497;DP=548;FS=11.801;HRun=0;HaplotypeScore=67.4390;InbreedingCoeff=0.9072;MQ=89.16;MQ0=0;MQRankSum=-10.482;QD=43.65;ReadPosRankSum=1.500;VQSLOD=4.5643;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,44:44:99:2106,132,0	0/0:7,0:7:21.07:0,21,291	0/0:33,0:33:91.99:0,92,1203	0/0:27,0:27:61.44:0,61,933	0/0:21,0:21:63.21:0,63,879	0/0:16,0:15:48.16:0,48,671	0/0:27,0:27:75.25:0,75,1049	1/1:0,16:16:48.10:714,48,0	0/0:13,0:13:39.13:0,39,545	0/0:30,0:30:87.29:0,87,1204	0/0:15,0:15:45.15:0,45,629	0/0:13,0:13:39.12:0,39,528	0/0:23,0:23:66.22:0,66,923	0/0:27,0:27:81.27:0,81,1133	1/1:0,18:18:54.18:862,54,0	1/1:0,17:17:45.15:718,45,0	0/0:31,0:31:93.30:0,93,1284	0/0:9,0:9:24.08:0,24,336	1/1:0,14:14:42.14:664,42,0	1/1:0,13:13:30.10:479,30,0	0/0:24,0:24:72.22:0,72,988	1/1:1,12:13:33.11:527,33,0	0/0:20,0:20:57.19:0,57,796	0/0:23,0:23:69.23:0,69,965	1/1:0,13:13:36.12:575,36,0	0/1:4,18:22:62.75:742,0,63	1/1:0,17:17:48.16:767,48,0	1/1:0,2:2:6.02:96,6,0
chr10	5429805	.	A	AT	496.89	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.112;DP=732;FS=10.653;HRun=6;HaplotypeScore=153.0970;InbreedingCoeff=0.9920;MQ=86.44;MQ0=0;MQRankSum=-2.519;QD=19.11;ReadPosRankSum=0.267;VQSLOD=2.0211;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,19:26:48.15:592,48,0	0/0:15,0:15:45.10:0,45,459	0/0:27,0:27:57.12:0,57,579	0/0:26,0:26:41.92:0,42,455	0/0:27,0:27:69.15:0,69,704	0/0:24,0:24:69.12:0,69,689	0/0:21,0:21:63.11:0,63,629	0/0:34,0:34:87.18:0,87,879	0/0:22,0:22:60.13:0,60,612	0/0:39,0:39:99:0,111,1118	0/0:34,0:34:99:0,99,1010	0/0:24,0:24:69.14:0,69,697	0/0:33,0:33:99:0,99,997	0/0:29,0:29:87.17:0,87,873	0/0:38,0:38:99:0,102,1031	0/0:26,0:26:66.14:0,66,673	0/0:30,0:30:84.17:0,84,849	0/0:20,0:20:57.13:0,57,581	0/0:24,0:24:63.12:0,63,632	0/0:35,0:35:93.19:0,93,938	0/0:14,0:14:42.10:0,42,429	0/0:24,0:24:66.14:0,66,666	0/0:20,0:20:57.12:0,57,576	0/0:28,0:28:63.11:0,63,634	0/0:28,0:28:72.10:0,72,709	0/0:27,0:27:75.14:0,75,752	0/0:30,0:30:90.18:0,90,907	0/0:7,0:7:18.04:0,18,183
chr10	5430643	.	G	GC	2295.72	PASS	AB=0.929;AC=23;AF=0.411;AN=56;BaseQRankSum=11.719;DP=679;FS=1.095;HRun=2;HaplotypeScore=61.7704;InbreedingCoeff=0.8399;MQ=55.73;MQ0=10;MQRankSum=-8.291;QD=9.29;ReadPosRankSum=-4.919;VQSLOD=-0.5815;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,26:18:27.09:388,27,0	0/0:10,0:10:30.09:0,30,372	0/0:27,0:4:12.03:0,12,140	0/1:24,2:7:71.23:71,0,82	0/0:26,0:26:78.24:0,78,956	0/0:24,0:24:72.23:0,72,892	0/0:24,0:24:66.21:0,66,818	1/1:5,9:6:9.03:130,9,0	0/0:23,0:23:66.19:0,66,805	0/0:46,0:46:99:0,135,1657	0/0:13,0:13:36.11:0,36,446	0/0:20,0:20:60.18:0,60,731	0/0:27,0:27:78.23:0,78,954	0/0:26,0:26:78.25:0,78,967	1/1:3,29:17:15.05:216,15,0	1/1:0,24:13:18.06:259,18,0	0/0:31,0:31:87.27:0,87,1079	0/0:27,0:27:78.22:0,78,951	1/1:0,13:6:15.05:216,15,0	1/1:3,14:10:9.03:129,9,0	0/0:57,0:57:99:0,169,2069	1/1:1,16:8:12.04:172,12,0	0/0:21,0:21:60.17:0,60,730	0/0:30,0:30:84.25:0,84,1027	1/1:0,23:9:8.99:106,9,0	1/1:5,24:17:1.93:475,2,0	1/1:1,15:7:6.02:86,6,0	1/1:0,8:7:18.06:259,18,0
chr10	5431388	.	A	ACGTT	15467.86	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=14.862;DP=631;FS=0.000;HRun=0;HaplotypeScore=118.8268;InbreedingCoeff=0.9827;MQ=60.83;MQ0=0;MQRankSum=-7.658;QD=59.26;ReadPosRankSum=0.065;VQSLOD=6.4245;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,36:44:99:2573,99,0	0/0:15,0:15:42.14:0,42,784	0/0:11,0:11:14.09:0,14,247	0/0:16,0:15:26.86:0,27,326	0/0:34,0:34:96.27:0,96,1694	0/0:18,0:18:45.15:0,45,840	0/0:26,0:26:72.18:0,72,1306	1/1:12,14:24:45.05:895,45,0	0/0:15,0:15:36.12:0,36,670	0/0:28,0:28:72.24:0,72,1311	0/0:24,0:24:66.23:0,66,1232	0/0:19,0:19:57.17:0,57,1031	0/0:14,0:14:42.14:0,42,784	0/0:24,0:23:66.23:0,66,1232	1/1:3,17:19:51.18:1356,51,0	1/1:5,15:20:51.18:1347,51,0	0/0:36,0:36:99:0,105,1960	0/0:23,0:23:66.23:0,66,1232	1/1:7,14:21:48.14:1199,48,0	1/1:5,26:31:81.28:2152,81,0	0/0:31,0:31:90.27:0,90,1602	1/1:7,24:32:75.25:1807,75,0	0/0:18,0:18:42.13:0,42,752	0/0:18,0:18:45.15:0,45,840	1/1:3,13:16:45.11:1056,45,0	1/1:2,18:21:7.20:1486,7,0	1/1:5,17:22:47.92:1197,48,0	1/1:0,5:5:15.05:400,15,0
chr10	5431874	.	T	TC	12814.48	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=16.555;DP=741;FS=9.769;HRun=1;HaplotypeScore=101.4921;InbreedingCoeff=0.9998;MQ=78.38;MQ0=0;MQRankSum=-7.927;QD=43.89;ReadPosRankSum=2.702;VQSLOD=3.7790;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,43:43:99:1961,123,0	0/0:12,0:12:36.11:0,36,485	0/0:33,0:33:92.92:0,93,1223	0/0:29,0:29:72.10:0,72,900	0/0:35,0:35:99:0,102,1327	0/0:33,0:33:99:0,99,1376	0/0:27,0:27:78.24:0,78,1060	1/1:0,33:33:99:1523,99,0	0/0:20,0:20:60.19:0,60,822	0/0:39,0:39:99:0,111,1516	0/0:14,0:14:42.14:0,42,584	0/0:25,0:25:72.23:0,72,989	0/0:24,0:24:72.21:0,72,982	0/0:31,0:31:93.31:0,93,1300	1/1:0,22:22:63.15:974,63,0	1/1:0,26:26:78.27:1243,78,0	0/0:26,0:26:75.25:0,75,1038	0/0:17,0:17:51.17:0,51,702	1/1:1,21:21:63.20:984,63,0	1/1:1,22:23:57.19:909,57,0	0/0:37,0:37:99:0,111,1507	1/1:1,23:24:66.22:1044,66,0	0/0:23,0:23:66.21:0,66,902	0/0:24,0:24:72.23:0,72,991	1/1:1,20:21:54.18:861,54,0	1/1:3,22:25:27.25:942,27,0	1/1:1,33:34:99:1578,99,0	1/1:1,18:19:51.17:795,51,0
chr10	5431953	.	GTCAACAGCAGTTTCCAGACT	G	18892.45	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=14.268;DP=616;FS=42.925;HRun=0;HaplotypeScore=325.8915;InbreedingCoeff=0.9825;MQ=69.41;MQ0=4;MQRankSum=-14.643;QD=114.50;ReadPosRankSum=-0.078;VQSLOD=3.2161;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,11:19:48.12:2024,48,0	0/0:15,0:15:45.15:0,45,3760	0/0:33,0:22:60.19:0,60,2694	0/0:26,0:22:61.01:0,61,3468	0/0:37,0:37:99:0,111,8697	0/0:27,0:27:81.28:0,81,5978	0/0:27,0:27:81.26:0,81,6578	1/1:1,12:11:30.10:848,30,0	0/0:27,0:27:81.28:0,81,6650	0/0:16,0:16:45.15:0,45,3912	0/0:17,0:17:51.18:0,51,4001	0/0:24,0:24:72.25:0,72,5805	0/0:29,0:29:84.27:0,84,6840	0/0:34,0:34:96.33:0,96,8014	1/1:3,18:23:66.23:3202,66,0	1/1:5,8:15:42.10:1754,42,0	0/0:29,0:29:87.30:0,87,7463	0/0:17,0:17:51.17:0,51,3576	1/1:4,2:6:15.02:528,15,0	1/1:6,11:17:51.17:2011,51,0	0/0:50,0:50:99:0,144,11358	1/1:3,10:14:36.12:1801,36,0	0/0:19,0:19:57.20:0,57,4256	0/0:24,0:24:66.21:0,66,4978	1/1:4,14:21:54.18:2549,54,0	1/1:7,13:21:54.18:2498,54,0	1/1:5,7:13:36.08:1484,36,0	1/1:1,1:2:6.02:195,6,0
chr10	5432071	.	ACATGCTTTAAAT	A	12152.32	PASS	AB=0.577;AC=19;AF=0.352;AN=54;BaseQRankSum=16.069;DP=623;FS=1.196;HRun=0;HaplotypeScore=237.3620;InbreedingCoeff=0.9157;MQ=59.32;MQ0=1;MQRankSum=-15.033;QD=70.24;ReadPosRankSum=3.226;VQSLOD=4.7337;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,12:19:50.91:1426,51,0	0/0:9,0:9:27.07:0,27,1417	0/0:32,0:30:87.30:0,87,4249	0/0:24,0:21:60.11:0,60,2507	0/0:32,0:32:96.33:0,96,5613	0/0:30,0:30:84.29:0,84,5126	0/0:23,0:23:69.24:0,69,3822	1/1:7,12:18:30.42:767,30,0	0/0:29,0:29:87.28:0,87,5225	0/0:41,0:41:99:0,123,7207	0/0:25,0:25:72.25:0,72,4164	0/0:28,0:28:84.27:0,84,4732	0/0:29,0:29:84.26:0,84,4802	0/0:35,0:35:99:0,105,5932	1/1:1,23:24:56.68:2141,57,0	1/1:3,15:18:42.04:1390,42,0	0/0:23,0:23:69.24:0,69,4015	0/0:14,0:14:42.14:0,42,2521	1/1:2,9:11:27.92:832,28,0	1/1:2,16:18:33.11:1240,33,0	0/0:31,0:31:90.30:0,90,5249	1/1:1,16:17:27.09:1005,27,0	0/0:21,0:21:57.18:0,57,3172	0/0:24,0:23:69.22:0,69,4033	1/1:0,12:12:27.09:988,27,0	0/1:4,11:15:99:1033,0,331	1/1:4,16:20:15.42:1329,15,0	./.
chr10	5432711	.	A	AAC	7447.96	PASS	AC=20;AF=0.370;AN=54;BaseQRankSum=11.373;DP=577;FS=104.129;HRun=0;HaplotypeScore=86.9667;InbreedingCoeff=0.9981;MQ=98.37;MQ0=0;MQRankSum=-12.437;QD=51.01;ReadPosRankSum=1.394;VQSLOD=0.3676;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,15:17:45.15:868,45,0	0/0:14,0:14:42.13:0,42,620	0/0:27,0:27:66.19:0,66,974	0/0:35,0:35:96.31:0,96,1414	0/0:30,0:30:84.29:0,84,1286	0/0:28,0:28:81.28:0,81,1241	0/0:28,0:28:84.22:0,84,1233	1/1:1,5:6:18.06:335,18,0	0/0:32,0:32:96.32:0,96,1450	0/0:24,0:24:72.23:0,72,1064	0/0:13,0:13:39.13:0,39,596	0/0:26,0:26:75.25:0,75,1149	0/0:30,0:30:81.26:0,81,1219	0/0:20,0:20:60.20:0,60,918	1/1:1,15:16:42.13:777,42,0	1/1:4,13:17:48.16:924,48,0	0/0:28,0:28:84.29:0,84,1287	0/0:27,0:27:78.25:0,78,1172	1/1:3,6:9:24.08:414,24,0	1/1:4,14:18:39.13:730,39,0	0/0:27,0:27:75.25:0,75,1148	1/1:1,17:18:51.17:952,51,0	0/0:18,0:18:51.17:0,51,781	0/0:24,0:24:72.24:0,72,1098	1/1:1,10:11:33.11:615,33,0	1/1:0,10:10:24.08:463,24,0	1/1:1,23:24:72.25:1370,72,0	./.
chr10	5432781	.	TA	T	6198.02	PASS	AB=0.552;AC=21;AF=0.375;AN=56;BaseQRankSum=17.968;DP=556;FS=38.991;HRun=1;HaplotypeScore=88.7717;InbreedingCoeff=0.9189;MQ=79.65;MQ0=0;MQRankSum=-5.868;QD=33.14;ReadPosRankSum=0.215;VQSLOD=2.2647;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,23:23:66.21:830,66,0	0/0:12,0:12:36.11:0,36,552	0/0:17,0:17:50.38:0,50,741	0/0:13,0:13:39.07:0,39,567	0/0:25,0:25:75.22:0,75,1149	0/0:21,0:21:63.20:0,63,981	0/0:24,0:24:72.23:0,72,1123	1/1:2,35:37:99:1226,104,0	0/0:26,0:26:78.26:0,78,1218	0/0:24,0:24:72.24:0,72,1131	0/0:21,0:21:60.19:0,60,928	0/0:23,0:23:69.21:0,69,1078	0/0:30,0:30:90.29:0,90,1414	0/0:24,0:24:72.23:0,72,1112	1/1:0,17:18:51.13:623,51,0	1/1:1,13:14:42.12:507,42,0	0/0:25,0:25:75.26:0,75,1195	0/0:25,0:25:75.17:0,75,1118	1/1:4,8:12:24.07:290,24,0	1/1:0,16:16:48.15:594,48,0	0/0:15,0:15:45.02:0,45,633	1/1:1,15:16:47.23:526,47,0	0/0:25,0:25:75.24:0,75,1176	0/0:19,0:19:57.19:0,57,911	1/1:0,14:14:39.12:487,39,0	0/1:3,13:16:50.34:439,0,50	1/1:4,12:17:45.99:526,46,0	1/1:0,4:4:12.04:148,12,0
chr10	5432933	.	AC	A	1231.21	PASS	AC=4;AF=0.074;AN=54;BaseQRankSum=6.909;DP=717;FS=2.988;HRun=2;HaplotypeScore=162.6641;InbreedingCoeff=0.9998;MQ=82.25;MQ0=0;MQRankSum=-9.424;QD=30.03;ReadPosRankSum=1.024;VQSLOD=3.3640;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:47:99:0,129,1029	0/0:20,0:20:60.19:0,60,879	0/0:20,0:20:56.91:0,57,789	0/0:23,0:23:66.10:0,66,888	0/0:29,0:29:87.29:0,87,1302	0/0:20,0:20:60.20:0,60,899	0/0:25,0:25:75.23:0,75,1079	0/0:42,0:41:99:0,113,806	0/0:37,0:37:99:0,108,1607	0/0:42,0:42:99:0,120,1787	0/0:12,0:12:36.12:0,36,526	0/0:24,0:24:72.24:0,72,1074	0/0:29,0:29:87.28:0,87,1278	0/0:37,0:37:99:0,111,1656	0/0:30,0:30:89.68:0,90,707	0/0:26,0:26:77.77:0,78,649	0/0:26,0:26:75.21:0,75,1094	0/0:16,0:15:48.16:0,48,708	0/0:21,0:21:55.44:0,55,402	0/0:18,0:18:41.91:0,42,359	0/0:49,0:49:99:0,144,2146	0/0:13,0:13:35.88:0,36,287	0/0:19,0:19:54.17:0,54,784	0/0:31,0:31:90.22:0,90,1299	0/0:19,0:19:53.92:0,54,466	1/1:4,17:21:57.13:687,57,0	1/1:2,18:19:54.17:665,54,0	./.
chr10	5432956	.	AG	A	8495.93	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=20.774;DP=730;FS=16.263;HRun=3;HaplotypeScore=138.6174;InbreedingCoeff=0.9747;MQ=80.26;MQ0=0;MQRankSum=-8.015;QD=32.30;ReadPosRankSum=-0.421;VQSLOD=2.7195;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,43:45:99:1486,120,0	0/0:19,0:19:54.18:0,54,777	0/0:25,0:25:72.22:0,72,994	0/0:15,0:15:39.10:0,39,522	0/0:35,0:35:99:0,99,1425	0/0:25,0:25:72.24:0,72,1035	0/0:28,0:28:75.25:0,75,1080	1/1:2,39:41:99:1369,114,0	0/0:29,0:29:87.29:0,87,1253	0/0:39,0:39:99:0,111,1588	0/0:13,0:13:39.13:0,39,561	0/0:28,0:28:84.26:0,84,1188	0/0:31,0:31:93.30:0,93,1319	0/0:40,0:40:99:0,120,1727	1/1:2,36:38:99:1300,105,0	1/1:2,25:27:26:774,26,0	0/0:25,0:25:66.22:0,66,945	0/0:21,0:20:60.19:0,60,846	1/1:2,16:18:51.10:599,51,0	1/1:1,12:13:33.10:407,33,0	0/0:44,0:44:99:0,126,1791	1/1:1,16:17:45.14:557,45,0	0/0:19,0:19:54.18:0,54,777	0/0:31,0:31:90.29:0,90,1277	1/1:2,18:20:45.14:557,45,0	1/1:2,18:20:54.17:668,54,0	1/1:2,21:23:60.19:741,60,0	1/1:0,1:1:3.01:37,3,0
chr10	5433753	.	TGGTTC	T	3767.19	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=9.450;DP=413;FS=142.562;HRun=0;HaplotypeScore=91.4232;InbreedingCoeff=0.9425;MQ=69.67;MQ0=0;MQRankSum=-11.545;QD=54.60;ReadPosRankSum=2.827;VQSLOD=0.3952;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,4:4:9.03:176,9,0	0/0:8,0:8:24.08:0,24,689	0/0:19,0:15:32.46:0,32,773	0/0:21,0:12:28.92:0,29,546	0/0:36,0:36:99:0,105,2839	0/0:22,0:22:66.23:0,66,1780	0/0:21,0:21:63.22:0,63,1782	1/1:0,10:10:30.10:604,30,0	0/0:15,0:15:45.15:0,45,1253	0/0:24,0:24:72.24:0,72,1977	0/0:20,0:20:60.21:0,60,1734	0/0:19,0:19:57.20:0,57,1631	0/0:19,0:19:57.20:0,57,1597	0/0:11,0:11:33.11:0,33,948	1/1:0,3:3:9.03:175,9,0	1/1:0,2:2:4.26:61,4,0	0/0:26,0:26:75.26:0,75,1647	0/0:18,0:18:51.12:0,51,1395	1/1:0,7:7:21.05:342,21,0	1/1:0,9:9:27.09:527,27,0	0/0:19,0:19:54.19:0,54,1560	1/1:0,2:2:6.02:117,6,0	0/0:24,0:24:69.22:0,69,1827	0/0:22,0:22:63.69:0,64,1729	1/1:0,8:8:21.07:409,21,0	1/1:0,11:11:33.11:635,33,0	1/1:0,8:8:21.07:417,21,0	1/1:0,5:5:15.05:304,15,0
chr10	5433758	.	CT	C	505.52	PASS	AB=0.877;AC=4;AF=0.087;AN=46;BaseQRankSum=7.274;DP=425;FS=0.696;HRun=11;HaplotypeScore=73.2226;InbreedingCoeff=0.4488;MQ=69.07;MQ0=1;MQRankSum=-0.173;QD=7.33;ReadPosRankSum=1.825;VQSLOD=2.1494;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	0/0:8,0:9:20.89:0,21,205	0/0:21,1:15:0.94:0,1,192	0/1:17,2:11:15.78:17,0,16	0/0:36,0:37:84.02:0,84,858	0/0:18,1:20:22.60:0,23,457	0/1:20,3:23:13.78:14,0,483	0/0:10,0:10:0:0,0,0	0/0:14,0:15:38.92:0,39,392	0/0:24,0:26:53.96:0,54,553	0/0:21,0:21:51.10:0,51,535	0/0:20,0:20:48.11:0,48,505	0/0:19,0:19:45.07:0,45,458	0/0:13,0:13:36.07:0,36,371	./.	0/0:2,0:2:0.89:0,1,2	1/1:2,24:26:71.71:579,72,0	0/0:18,1:19:29.38:0,29,481	0/0:7,0:7:0:0,0,0	0/0:9,0:9:0:0,0,0	0/0:18,2:21:23.46:0,23,446	./.	0/0:21,1:22:23.39:0,23,424	0/0:21,0:23:50.75:0,51,496	0/0:8,0:8:0:0,0,0	0/0:11,0:11:0:0,0,0	./.	./.
chr10	5434738	.	TG	T	653.93	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=1.797;DP=664;FS=11.009;HRun=5;HaplotypeScore=77.3178;InbreedingCoeff=0.9044;MQ=62.88;MQ0=0;MQRankSum=-1.028;QD=26.16;ReadPosRankSum=0.990;VQSLOD=2.7781;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:87.26:0,87,1127	0/0:14,0:14:39.13:0,39,534	0/0:16,0:15:32.32:0,32,417	0/0:24,0:22:62.99:0,63,810	0/0:27,0:27:78.23:0,78,1034	0/0:24,0:23:69.23:0,69,943	0/0:21,0:21:63.20:0,63,846	0/0:36,0:36:89.90:0,90,1187	0/0:18,0:18:54.18:0,54,737	0/0:25,0:25:72.24:0,72,983	0/0:24,0:24:72.23:0,72,965	0/0:10,0:10:30.10:0,30,410	0/0:27,0:27:72.06:0,72,985	0/0:30,0:30:90.30:0,90,1229	0/0:30,0:29:87.25:0,87,1102	0/0:30,0:30:84.28:0,84,1149	1/1:3,22:25:66.19:749,66,0	0/0:15,0:15:45.15:0,45,615	0/0:23,0:23:63.20:0,63,848	0/0:26,0:26:72.23:0,72,970	0/0:24,0:24:72.22:0,72,968	0/0:29,0:28:69.23:0,69,943	0/0:27,0:27:78.26:0,78,1067	0/0:20,0:20:60.20:0,60,821	0/0:21,0:21:57.16:0,57,719	0/0:34,0:33:99:0,99,1261	0/0:32,0:32:84.24:0,84,1056	0/0:2,0:2:6.01:0,6,65
chr10	5434939	.	T	TTG	499.63	PASS	AB=0.963;AC=20;AF=0.385;AN=52;BaseQRankSum=0.782;DP=611;FS=0.000;HRun=0;HaplotypeScore=131.4074;InbreedingCoeff=0.3525;MQ=62.89;MQ0=10;MQRankSum=-0.472;QD=1.81;ReadPosRankSum=1.687;VQSLOD=2.3632;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:23:4.62:27,0,5	0/0:11,0:11:12.03:0,12,129	./.	./.	1/1:10,11:22:15.05:223,15,0	0/0:23,0:21:20.54:0,21,187	0/0:30,1:33:26.85:0,27,266	1/1:31,0:31:2.92:17,3,0	0/0:20,0:22:6.77:0,7,216	0/0:20,0:21:14.85:0,15,130	0/1:16,0:16:51.88:52,0,80	0/0:19,0:21:20.91:0,21,204	0/0:23,0:25:20.87:0,21,202	0/0:18,0:18:12.02:0,12,127	0/1:18,0:18:0:0,0,0	1/1:28,0:31:13.36:94,13,0	0/0:13,0:23:5.68:0,6,28	0/1:13,0:12:8.21:8,0,62	1/1:16,0:15:12.27:104,12,0	0/1:16,0:16:9.34:18,0,9	0/0:55,0:54:15.81:0,16,307	0/1:11,0:19:5.38:21,0,5	0/0:9,0:9:6.01:0,6,65	0/0:28,0:28:29.84:0,30,294	1/1:16,0:16:2.09:7,2,0	0/1:21,0:20:0.14:52,0,0	0/1:22,0:21:14.56:15,0,37	1/1:7,0:7:2.99:24,3,0
chr10	5434980	.	TGTATGTTG	T	2943.18	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=6.900;DP=711;FS=9.729;HRun=0;HaplotypeScore=163.2093;InbreedingCoeff=0.5848;MQ=54.32;MQ0=36;MQRankSum=-1.152;QD=11.06;ReadPosRankSum=-2.025;VQSLOD=1.8097;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:26:12.61:420,13,0	0/0:9,0:9:21.07:0,21,725	0/0:77,0:15:35.95:0,36,744	0/1:77,0:20:2.43:2,0,814	0/0:23,0:23:51:0,51,1347	0/0:24,0:24:53.81:0,54,1627	0/0:36,0:36:78.02:0,78,2225	1/1:16,0:16:45.07:824,45,0	0/0:25,0:25:27.98:0,28,1570	0/0:24,0:23:56.25:0,56,1776	0/1:13,0:13:0.37:0,0,670	0/0:19,0:19:39.13:0,39,1377	0/0:23,0:24:51.53:0,52,1421	0/0:24,0:23:51.17:0,51,1429	1/1:3,27:30:6.02:144,6,0	0/1:26,0:26:31.27:31,0,817	0/0:28,0:28:11.36:0,11,806	0/1:22,0:21:53.77:54,0,898	0/1:12,0:11:17.96:18,0,624	0/0:8,0:8:11.01:0,11,306	0/0:62,0:61:99:0,124,3541	0/0:15,0:15:22.27:0,22,506	0/0:11,0:11:28.34:0,28,834	0/0:36,0:36:81.28:0,81,2615	1/1:1,11:12:8.51:133,9,0	1/1:1,14:15:45.12:872,45,0	1/1:14,0:13:35.81:607,36,0	1/1:2,0:1:2.99:24,3,0
chr10	5434981	.	GTA	G	924.53	PASS	AB=1.000;AC=16;AF=0.286;AN=56;BaseQRankSum=9.695;DP=704;FS=6.532;HRun=0;HaplotypeScore=113.8846;InbreedingCoeff=0.7650;MQ=54.36;MQ0=36;MQRankSum=0.124;QD=6.12;ReadPosRankSum=-1.911;VQSLOD=2.0145;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:26:12.13:154,12,0	0/0:9,0:9:21.02:0,21,272	0/0:76,0:15:42.12:0,42,297	0/0:77,0:20:28.96:0,29,303	0/0:22,0:22:41.53:0,42,366	0/0:24,0:24:53.52:0,54,602	0/0:36,0:36:55.36:0,55,867	1/1:14,0:14:35.41:223,35,0	0/0:25,0:25:18.40:0,18,497	0/0:25,0:24:40.34:0,40,594	0/1:12,0:12:3.79:4,0,211	0/0:19,0:19:39.04:0,39,552	0/0:25,0:25:45.56:0,46,575	0/0:22,0:21:50.53:0,51,468	1/1:30,0:30:5.85:34,6,0	0/1:26,0:26:0.22:0,0,213	0/0:28,0:28:32.25:0,32,267	0/0:22,1:22:6.54:0,7,256	0/0:12,0:11:3.04:0,3,290	0/0:8,0:8:11.88:0,12,122	0/0:60,1:60:61.53:0,62,1053	0/0:15,0:15:17.95:0,18,149	0/0:11,0:11:26.94:0,27,327	0/0:28,6:34:40.20:0,40,874	1/1:12,0:12:8.74:80,9,0	1/1:15,0:15:44.78:368,45,0	1/1:11,2:12:13.95:217,14,0	1/1:2,0:1:2.99:24,3,0
chr10	5434982	.	TATGTTG	T	2908.46	PASS	AB=0.997;AC=19;AF=0.339;AN=56;BaseQRankSum=6.247;DP=699;FS=22.321;HRun=0;HaplotypeScore=141.7324;InbreedingCoeff=0.5330;MQ=54.23;MQ0=36;MQRankSum=0.144;QD=11.23;ReadPosRankSum=-2.225;VQSLOD=1.2240;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:25:11.88:419,12,0	0/0:8,0:8:21.07:0,21,599	0/0:79,0:17:41.20:0,41,887	0/1:77,0:20:2.44:2,0,813	0/0:22,0:22:51.17:0,51,1188	0/0:26,0:26:37.69:0,38,1536	0/0:35,0:35:81.08:0,81,2020	1/1:0,14:14:42.14:806,42,0	0/0:24,0:24:37.17:0,37,1300	0/0:23,0:22:54.04:0,54,1669	0/0:12,0:12:0.04:0,0,614	0/0:19,0:19:39.13:0,39,1186	0/0:24,0:24:37.17:0,37,1285	0/0:21,0:20:51.17:0,51,1277	1/1:29,0:29:6.02:103,6,0	0/1:27,0:27:28.73:29,0,910	0/0:29,0:29:52.82:0,53,905	0/1:22,0:21:81.70:82,0,922	0/1:13,0:12:36.67:37,0,572	0/1:8,0:8:8.74:9,0,271	0/0:57,0:56:50.08:0,50,3015	0/0:14,0:14:22.27:0,22,499	0/0:11,0:11:28.34:0,28,715	0/0:35,0:35:81.25:0,81,2250	1/1:11,1:12:8.33:117,8,0	1/1:15,0:15:45.12:818,45,0	1/1:13,0:12:35.92:649,36,0	1/1:2,0:1:2.99:24,3,0
chr10	5434986	.	TTG	T	1641.48	PASS	AB=0.940;AC=13;AF=0.241;AN=54;BaseQRankSum=8.610;DP=692;FS=2.638;HRun=0;HaplotypeScore=110.3269;InbreedingCoeff=0.7200;MQ=54.20;MQ0=35;MQRankSum=-0.482;QD=10.46;ReadPosRankSum=-0.021;VQSLOD=3.5497;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,8:20:20.90:290,21,0	0/0:7,0:7:21.07:0,21,424	0/0:88,0:19:53.64:0,54,941	0/0:83,1:21:15.79:0,16,727	0/0:20,0:20:51.17:0,51,947	0/0:22,1:23:60.20:0,60,1207	0/0:32,1:33:84.11:0,84,1626	1/1:14,0:14:42.11:538,42,0	0/0:23,0:23:66.22:0,66,1217	0/0:21,0:21:60.20:0,60,1148	0/0:12,0:12:27.08:0,27,493	0/0:20,0:20:45.15:0,45,872	0/0:22,0:22:56.65:0,57,1038	0/0:19,0:18:47.94:0,48,963	1/1:28,1:29:6.02:69,6,0	0/1:28,2:31:7.98:8,0,929	0/0:25,0:25:57.14:0,57,968	0/1:19,3:22:33.50:33,0,863	0/0:12,0:11:22.13:0,22,438	0/0:9,0:9:16.08:0,16,267	0/0:53,0:52:99:0,138,2600	0/0:13,0:13:25.32:0,25,465	0/0:14,0:14:40.38:0,40,764	0/0:36,0:36:83.50:0,83,1632	0/1:12,0:12:2.31:61,0,2	1/1:14,1:15:38.95:479,39,0	1/1:12,1:12:21.56:338,22,0	./.
chr10	5435102	.	AG	A	3658.42	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=13.652;DP=609;FS=14.625;HRun=6;HaplotypeScore=82.6583;InbreedingCoeff=0.9584;MQ=73.54;MQ0=2;MQRankSum=-3.210;QD=26.51;ReadPosRankSum=2.325;VQSLOD=2.8015;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,25:26:66.17:709,66,0	0/0:3,0:3:9.03:0,9,118	0/0:33,0:29:78.25:0,78,1016	0/0:32,0:30:55.37:0,55,646	0/0:27,0:27:78.24:0,78,1011	0/0:27,0:27:75.24:0,75,986	0/0:24,0:24:66.17:0,66,849	1/1:4,18:22:54.11:571,54,0	0/0:25,0:25:66.16:0,66,835	0/0:31,0:31:87.27:0,87,1121	0/0:16,0:16:42.14:0,42,550	0/0:18,0:18:51.17:0,51,669	0/0:24,0:24:66.17:0,66,845	0/0:24,0:24:72.23:0,72,943	1/1:3,13:16:36.09:387,36,0	0/0:20,0:20:48.11:0,48,612	0/0:26,0:26:75.23:0,75,970	0/0:23,0:23:54.15:0,54,694	0/0:15,0:13:39.13:0,39,512	0/0:21,0:21:54.16:0,54,695	0/0:29,0:29:83.89:0,84,1029	0/0:13,0:13:39.13:0,39,513	0/0:25,0:25:72.20:0,72,904	0/0:15,0:15:39.11:0,39,498	1/1:2,23:25:63.15:677,63,0	1/1:3,17:20:8.66:444,9,0	1/1:1,26:27:75.19:806,75,0	1/1:0,2:2:6.02:64,6,0
chr10	5435277	.	T	TAA	2770.39	PASS	AB=1.000;AC=18;AF=0.321;AN=56;BaseQRankSum=11.403;DP=483;FS=10.594;HRun=5;HaplotypeScore=84.1300;InbreedingCoeff=0.6102;MQ=54.33;MQ0=9;MQRankSum=-3.711;QD=13.92;ReadPosRankSum=-1.988;VQSLOD=-0.4176;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:18:30.10:435,30,0	0/0:9,0:9:27.07:0,27,330	0/0:6,0:4:6.01:0,6,76	0/0:6,0:4:6.02:0,6,76	0/1:25,0:25:11.46:11,0,548	0/0:27,0:26:63.19:0,63,800	0/0:11,0:11:24.07:0,24,305	1/1:22,0:19:30.09:426,30,0	0/0:22,0:22:56.89:0,57,545	0/0:20,0:20:51.11:0,51,616	0/0:23,0:22:57.16:0,57,709	0/0:18,0:18:42.10:0,42,507	0/0:29,0:29:87.28:0,87,1108	0/0:19,0:19:54.16:0,54,673	1/1:4,17:16:30.10:524,30,0	0/0:15,0:15:39.11:0,39,481	0/0:21,0:21:54.13:0,54,629	0/0:21,0:21:13.42:0,13,573	0/1:11,0:11:10.78:11,0,232	0/1:20,0:20:60.97:61,0,354	0/0:5,0:5:12.04:0,12,153	0/1:16,0:16:56.28:56,0,190	0/0:13,0:13:36.10:0,36,445	0/0:19,0:19:51.11:0,51,630	1/1:1,25:22:39.04:682,39,0	1/1:12,0:11:17.70:176,18,0	1/1:25,0:23:46.13:576,46,0	1/1:1,0:1:1.82:5,2,0
chr10	5435279	.	AAAAG	A	943.49	PASS	AB=0.880;AC=11;AF=0.229;AN=48;BaseQRankSum=4.661;DP=481;FS=1.621;HRun=0;HaplotypeScore=108.8352;InbreedingCoeff=0.7965;MQ=54.26;MQ0=9;MQRankSum=-1.606;QD=9.43;ReadPosRankSum=0.440;VQSLOD=2.2658;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/0:11,0:11:18.06:0,18,400	./.	./.	0/0:20,0:26:21.04:0,21,326	0/0:26,0:25:45.14:0,45,1004	0/0:11,0:11:15.04:0,15,292	./.	1/1:8,14:22:33.11:506,33,0	0/1:19,3:22:55.86:56,0,620	0/0:24,0:23:27.09:0,27,601	0/0:18,0:18:18.06:0,18,417	0/0:29,0:29:63.18:0,63,1313	0/0:19,0:19:30.10:0,30,693	0/0:21,0:16:30.07:0,30,463	0/0:15,0:15:27.09:0,27,627	1/1:21,0:21:24.06:265,24,0	0/0:22,0:22:39.13:0,39,891	0/0:12,0:12:18.05:0,18,266	0/0:21,0:21:39.11:0,39,628	0/0:5,0:5:9.01:0,9,149	0/0:15,0:15:33.03:0,33,483	0/0:13,0:13:15.05:0,15,349	0/0:19,0:19:29.97:0,30,645	0/0:26,0:22:39.13:0,39,680	1/1:9,0:8:9.01:84,9,0	1/1:25,0:23:17.80:165,18,0	1/1:1,0:1:3:28,3,0
chr10	5435281	.	AAG	A	1743.77	PASS	AB=0.935;AC=12;AF=0.214;AN=56;BaseQRankSum=8.476;DP=472;FS=5.722;HRun=0;HaplotypeScore=87.3628;InbreedingCoeff=0.7082;MQ=54.12;MQ0=9;MQRankSum=-4.426;QD=15.71;ReadPosRankSum=0.038;VQSLOD=2.6498;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,16:17:30.10:435,30,0	0/0:11,0:11:33.08:0,33,460	0/0:5,0:3:6.02:0,6,76	0/0:4,0:3:6.02:0,6,76	0/0:26,0:26:69.17:0,69,841	0/0:24,0:23:66.22:0,66,1087	0/0:11,0:11:30.10:0,30,461	1/1:3,15:14:30.09:426,30,0	0/1:22,0:22:35.04:35,0,255	0/0:21,0:21:40.08:0,40,745	0/0:23,0:22:63.18:0,63,903	0/0:16,0:16:45.13:0,45,658	0/0:30,0:30:90.29:0,90,1480	0/0:20,0:20:43.22:0,43,863	0/1:17,3:15:34.50:35,0,71	0/0:14,0:14:42.11:0,42,656	0/0:21,0:21:45.02:0,45,408	0/0:23,0:23:26.67:0,27,895	0/0:12,0:12:36.03:0,36,441	0/0:21,0:21:63.09:0,63,818	0/0:6,0:6:18.03:0,18,235	0/0:15,0:15:42.05:0,42,565	0/0:13,0:13:39.12:0,39,566	0/0:19,0:19:51.16:0,51,811	0/0:25,1:22:28.53:0,29,118	1/1:0,8:7:21.05:259,21,0	1/1:1,23:22:51.14:695,51,0	1/1:0,1:1:3.01:33,3,0
chr10	5435304	.	AAAGAAAGAAAGAAAGAAAGAAAGAAAGG	A	2423.92	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=6.707;DP=443;FS=2.556;HRun=0;HaplotypeScore=307.6742;InbreedingCoeff=0.8955;MQ=56.22;MQ0=9;MQRankSum=-7.878;QD=56.37;ReadPosRankSum=-0.970;VQSLOD=2.0574;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,1:11:17.59:218,18,0	0/0:8,0:8:24.07:0,24,2475	0/0:2,0:1:3.01:0,3,41	0/0:4,0:3:8.76:0,9,182	0/0:23,0:23:63.20:0,63,4261	0/0:31,0:30:87.30:0,87,8210	0/0:12,0:12:36.12:0,36,2839	1/1:9,0:8:20.68:137,21,0	0/0:22,0:22:57.18:0,57,4340	0/0:18,0:18:51.18:0,51,5326	0/0:18,0:17:51.18:0,51,5000	0/0:16,0:16:45.15:0,45,3682	0/0:32,0:32:96.32:0,96,9669	0/0:17,0:17:51.18:0,51,5377	0/0:24,0:20:54.18:0,54,4392	0/0:12,0:12:36.07:0,36,3649	0/0:27,0:27:44.44:0,44,2612	0/0:22,0:22:63.21:0,63,6055	0/0:17,0:14:42.09:0,42,2457	0/0:17,0:17:51.18:0,51,4675	0/0:6,0:6:18.06:0,18,1492	0/0:15,0:15:45.15:0,45,4170	0/0:10,0:10:27.09:0,27,2467	0/0:19,0:19:54.19:0,54,5136	0/0:28,0:25:57.43:0,57,5468	1/1:3,3:5:14.91:677,15,0	1/1:9,6:15:29.74:1344,30,0	1/1:0,1:1:3.01:213,3,0
chr10	5435328	.	AAAGG	A	3683.14	PASS	AB=1.000;AC=20;AF=0.357;AN=56;BaseQRankSum=7.883;DP=505;FS=8.365;HRun=0;HaplotypeScore=124.7970;InbreedingCoeff=0.3782;MQ=62.35;MQ0=3;MQRankSum=-3.270;QD=14.00;ReadPosRankSum=-1.734;VQSLOD=2.0926;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:18:50.44:349,50,0	0/0:7,0:7:21.06:0,21,507	0/0:8,0:8:17.94:0,18,169	0/1:11,0:10:11.78:12,0,161	0/0:20,0:20:55.60:0,56,648	0/0:28,0:27:75.91:0,76,1338	0/0:11,0:11:33.03:0,33,502	1/1:1,22:22:62.57:499,63,0	0/1:25,0:25:99:161,0,223	0/0:18,0:18:16.82:0,17,813	0/0:17,0:17:44.13:0,44,836	0/0:19,0:19:57.06:0,57,787	0/0:31,0:31:81.80:0,82,1611	0/0:19,0:19:56.43:0,56,1017	0/1:24,0:24:99:266,0,203	0/1:15,0:15:84.89:85,0,360	1/1:1,21:22:24.08:463,24,0	0/0:27,0:27:81.11:0,81,1336	0/1:23,0:21:57.09:328,0,57	0/1:16,0:16:32.94:33,0,283	0/0:10,0:10:27.03:0,27,339	0/1:18,0:18:99:108,0,190	0/0:10,0:10:29.28:0,29,480	0/0:17,0:17:48.55:0,49,900	0/1:26,0:26:99:227,0,269	1/1:12,0:12:35.96:365,36,0	1/1:20,0:20:58.08:570,58,0	1/1:9,0:9:26.81:217,27,0
chr10	5435331	.	G	GAAA	973.81	PASS	AB=0.870;AC=7;AF=0.125;AN=56;BaseQRankSum=8.432;DP=504;FS=7.772;HRun=3;HaplotypeScore=127.0308;InbreedingCoeff=0.2822;MQ=63.77;MQ0=1;MQRankSum=0.665;QD=7.85;ReadPosRankSum=0.159;VQSLOD=-0.3896;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:21:56.46:0,56,410	0/0:7,0:7:21.07:0,21,368	0/0:9,0:9:26.99:0,27,324	0/0:12,0:11:16.89:0,17,250	0/1:21,0:21:66.50:67,0,528	0/0:26,0:26:78.25:0,78,1285	0/0:12,0:12:36.11:0,36,554	0/0:23,0:22:61.85:0,62,396	0/0:26,0:26:66.22:0,66,908	0/0:17,0:17:48.16:0,48,786	0/0:17,0:17:51.09:0,51,799	0/0:19,0:19:57.16:0,57,875	0/0:29,0:29:87.24:0,87,1375	0/0:20,0:20:57.19:0,57,960	0/1:25,0:25:1.58:94,0,2	0/0:16,0:16:47.36:0,47,335	0/0:21,0:21:23.81:0,24,169	0/0:27,0:27:81.23:0,81,1218	0/1:18,3:21:99:127,0,195	0/1:7,7:14:40.41:375,0,40	0/0:9,0:9:27.07:0,27,365	0/1:13,4:17:84.40:319,0,84	0/0:10,0:10:30.09:0,30,463	0/0:17,0:17:51.16:0,51,826	1/1:26,0:26:23.57:128,24,0	0/0:12,0:12:35.23:0,35,229	0/0:20,0:20:58.65:0,59,409	0/0:9,0:9:26.79:0,27,195
chr10	5435871	.	CTAGGAG	C	8177.87	PASS	AB=0.512;AC=13;AF=0.232;AN=56;BaseQRankSum=14.923;DP=567;FS=2.754;HRun=0;HaplotypeScore=127.4554;InbreedingCoeff=0.8578;MQ=67.13;MQ0=0;MQRankSum=-15.189;QD=50.17;ReadPosRankSum=3.107;VQSLOD=5.1665;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,33:40:63.22:1479,63,0	0/0:12,0:12:36.12:0,36,1245	0/0:11,0:11:5.50:0,6,479	0/0:7,0:8:7.07:0,7,142	0/0:29,0:29:78.27:0,78,2741	0/0:25,0:25:75.26:0,75,2613	0/0:18,0:18:48.16:0,48,1712	1/1:3,17:20:48.09:993,48,0	0/0:26,0:26:78.27:0,78,2620	0/0:15,0:15:45.15:0,45,1570	0/0:24,0:24:72.23:0,72,2319	0/0:20,0:20:60.21:0,60,2037	0/0:14,0:14:36.12:0,36,1223	0/0:16,0:16:48.16:0,48,1638	1/1:2,21:23:51.18:1200,51,0	0/0:17,0:17:51.18:0,51,1750	0/0:13,0:13:36.12:0,36,1282	0/0:24,0:24:72.25:0,72,2501	0/0:20,0:20:54.19:0,54,1788	0/0:23,0:23:69.24:0,69,2273	0/0:13,0:13:33.11:0,33,1137	0/0:19,0:19:54.19:0,54,1732	0/0:27,0:27:81.28:0,81,2805	0/0:30,0:30:87.30:0,87,3040	1/1:3,26:29:66.23:1553,66,0	0/1:1,21:22:40.77:1400,0,41	1/1:1,24:25:54.19:1271,54,0	1/1:0,4:4:12.04:283,12,0
chr10	5436888	.	TAC	T	5867.25	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=16.781;DP=624;FS=12.045;HRun=0;HaplotypeScore=93.7361;InbreedingCoeff=0.9885;MQ=71.19;MQ0=0;MQRankSum=-2.975;QD=34.72;ReadPosRankSum=0.554;VQSLOD=6.6919;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,44:45:99:1767,120,0	0/0:10,0:10:30.10:0,30,562	0/0:19,0:19:54.18:0,54,943	0/0:14,0:13:29.81:0,30,497	0/0:19,0:19:57.18:0,57,1023	0/0:19,0:19:54.16:0,54,978	0/0:24,0:24:69.22:0,69,1251	1/1:2,17:19:51.13:691,51,0	0/0:23,0:23:63.20:0,63,1148	0/0:32,0:32:96.32:0,96,1762	0/0:26,0:26:78.27:0,78,1445	0/0:19,0:19:54.19:0,54,1011	0/0:23,0:23:66.23:0,66,1224	0/0:23,0:23:65.81:0,66,1216	1/1:1,23:23:57.19:840,57,0	0/0:23,0:22:63.22:0,63,1180	0/0:35,0:35:99:0,105,1933	0/0:19,0:19:57.20:0,57,1068	0/0:12,0:12:36.12:0,36,663	0/0:24,0:24:72.25:0,72,1343	0/0:21,0:21:63.21:0,63,1149	0/0:22,0:22:66.22:0,66,1205	0/0:19,0:19:54.16:0,54,948	0/0:28,0:28:78.27:0,78,1461	1/1:0,15:14:36.12:530,36,0	1/1:1,25:26:22.01:1024,22,0	1/1:3,31:33:60.14:883,60,0	1/1:1,4:5:9.03:133,9,0
chr10	5437128	.	AG	A	1469.30	PASS	AB=0.571;AC=13;AF=0.232;AN=56;BaseQRankSum=10.211;DP=609;FS=50.435;HRun=6;HaplotypeScore=58.1121;InbreedingCoeff=0.8988;MQ=54.48;MQ0=15;MQRankSum=-8.605;QD=13.60;ReadPosRankSum=-0.034;VQSLOD=-0.2489;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,25:26:45.11:481,45,0	0/0:13,0:13:33.06:0,33,409	0/0:33,0:11:29.58:0,30,363	0/0:25,0:10:22.24:0,22,310	0/0:25,0:25:66.21:0,66,856	0/0:13,0:13:33.10:0,33,420	0/0:33,0:33:87.24:0,87,1091	1/1:2,14:10:10.79:248,11,0	0/0:23,0:23:66.21:0,66,867	0/0:33,1:33:81.12:0,81,1027	0/0:23,0:23:57.18:0,57,742	0/0:22,0:21:63.20:0,63,829	0/0:29,0:29:87.28:0,87,1131	0/0:21,0:21:63.20:0,63,829	1/1:0,16:13:21.05:225,21,0	0/0:25,0:25:66.20:0,66,851	0/0:19,0:18:54.18:0,54,709	0/0:23,0:22:57.18:0,57,746	0/0:16,0:15:39.09:0,39,494	0/0:24,0:23:66.21:0,66,868	0/0:32,0:31:84.25:0,84,1075	0/0:21,0:21:57.16:0,57,723	0/0:16,0:16:42.12:0,42,535	0/0:31,0:30:87.28:0,87,1138	1/1:0,8:6:15.04:161,15,0	0/1:5,15:14:0.38:340,0,0	1/1:1,12:10:14.88:161,15,0	1/1:2,1:1:3.01:32,3,0
chr10	5437368	.	T	TCCTA	1330.72	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=7.820;DP=367;FS=4.189;HRun=0;HaplotypeScore=66.3497;InbreedingCoeff=0.8659;MQ=71.12;MQ0=1;MQRankSum=-7.806;QD=34.12;ReadPosRankSum=-2.334;VQSLOD=2.9867;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,3:4:9.03:182,9,0	0/0:2,0:2:6.01:0,6,71	0/0:19,0:16:45.15:0,45,859	0/0:12,0:12:36.11:0,36,631	0/0:21,0:21:60.19:0,60,1122	0/0:21,0:21:63.22:0,63,1197	0/0:16,0:16:42.13:0,42,755	1/1:6,1:6:12:137,12,0	0/0:13,0:13:36.12:0,36,698	0/0:24,0:24:34.81:0,35,1233	0/0:18,0:18:51.17:0,51,969	0/0:10,0:10:30.10:0,30,581	0/0:15,0:15:39.13:0,39,756	0/0:13,0:13:39.13:0,39,742	0/0:2,2:1:2.99:0,3,24	0/0:21,0:21:60.18:0,60,1087	0/0:23,0:23:66.20:0,66,1244	0/0:16,0:16:42.12:0,42,753	0/0:19,0:19:54.17:0,54,949	0/0:13,0:13:36.12:0,36,682	0/0:12,0:12:36.12:0,36,684	0/0:3,0:3:9.03:0,9,174	0/0:8,0:8:24.08:0,24,465	0/0:25,0:25:75.26:0,75,1453	1/1:1,2:3:6.02:164,6,0	1/1:6,3:5:15.05:363,15,0	1/1:1,9:8:18.06:491,18,0	1/1:0,4:2:6.02:164,6,0
chr10	5437479	.	TA	T	245.34	PASS	AB=0.600;AC=7;AF=0.140;AN=50;BaseQRankSum=2.573;DP=284;FS=0.000;HRun=4;HaplotypeScore=35.1614;InbreedingCoeff=0.6502;MQ=61.04;MQ0=0;MQRankSum=-1.540;QD=16.36;ReadPosRankSum=-5.287;VQSLOD=1.1475;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,2:3:6.02:65,6,0	0/0:7,0:7:15.05:0,15,210	0/0:9,0:3:6.02:0,6,81	0/0:8,0:5:2.03:0,2,6	0/0:24,0:24:60.20:0,60,838	0/0:21,0:21:60.17:0,60,815	0/0:6,0:6:15.05:0,15,210	1/1:0,4:4:12.04:140,12,0	0/0:12,0:12:36.12:0,36,494	0/0:14,0:14:42.14:0,42,586	0/0:18,0:18:48.16:0,48,672	0/0:9,0:9:18.06:0,18,252	0/0:12,0:12:26.92:0,27,377	0/0:9,0:9:18.06:0,18,252	./.	0/0:13,0:13:30.10:0,30,416	0/0:26,0:26:72.22:0,72,972	0/0:13,0:13:30.10:0,30,420	0/0:29,0:27:66.18:0,66,921	0/0:15,0:15:42.14:0,42,587	0/0:2,0:2:3.01:0,3,41	0/0:8,0:8:18.06:0,18,251	0/0:10,0:10:30.09:0,30,398	0/0:4,0:4:12.04:0,12,163	./.	0/1:1,2:3:33:60,0,33	1/1:5,0:5:11.98:111,12,0	./.
chr10	5438010	.	G	GT	7618.17	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=2.072;DP=681;FS=0.000;HRun=1;HaplotypeScore=70.7661;InbreedingCoeff=0.9923;MQ=63.71;MQ0=0;MQRankSum=-3.214;QD=38.48;ReadPosRankSum=0.353;VQSLOD=5.2739;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,42:42:99:1592,108,0	0/0:5,0:5:15.05:0,15,195	0/0:21,0:19:52.91:0,53,613	0/0:26,0:25:52.82:0,53,854	0/0:26,0:26:72.23:0,72,930	0/0:29,0:29:78.24:0,78,993	0/0:22,0:22:66.21:0,66,856	1/1:3,40:38:99:1525,105,0	0/0:17,0:17:48.16:0,48,623	0/0:21,0:21:63.19:0,63,805	0/0:29,0:29:84.27:0,84,1087	0/0:25,0:25:66.17:0,66,813	0/0:30,0:30:87.27:0,87,1114	0/0:25,0:25:69.21:0,69,881	1/1:1,40:41:99:1709,114,0	0/0:8,0:8:24.08:0,24,312	0/0:21,0:21:60.17:0,60,761	0/0:24,0:24:69.22:0,69,896	0/0:19,0:19:57.14:0,57,720	0/0:34,0:34:99:0,99,1268	0/0:30,0:30:90.26:0,90,1138	0/0:11,0:11:30.10:0,30,389	0/0:22,0:22:60.16:0,60,746	0/0:38,0:38:99:0,111,1437	1/1:0,26:26:72.24:1079,72,0	1/1:1,18:19:18.23:769,18,0	1/1:2,18:20:47.97:718,48,0	1/1:0,6:6:15.05:225,15,0
chr10	5438121	.	C	CTT	888.31	PASS	AB=0.917;AC=11;AF=0.196;AN=56;BaseQRankSum=-1.522;DP=537;FS=4.692;HRun=13;HaplotypeScore=92.9304;InbreedingCoeff=0.6935;MQ=59.55;MQ0=19;MQRankSum=-3.300;QD=9.16;ReadPosRankSum=-3.900;VQSLOD=1.2183;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:34:18.02:0,18,54	0/1:4,0:5:3.28:3,0,65	0/0:19,0:11:5.91:0,6,52	0/1:8,0:4:0:0,0,0	0/0:28,0:29:65.76:0,66,625	0/0:21,0:22:39.72:0,40,345	0/0:7,0:5:11.97:0,12,106	0/0:31,0:26:6.90:0,7,41	0/0:12,0:13:35.20:0,35,285	0/0:23,0:19:35.87:0,36,313	0/0:26,0:27:44.73:0,45,363	0/0:8,0:9:17.58:0,18,132	0/0:18,0:18:47.69:0,48,404	0/0:17,0:17:32.86:0,33,282	0/1:21,0:20:4.86:5,0,22	1/1:5,4:9:14.41:172,14,0	0/0:32,0:32:86.72:0,87,752	0/0:29,0:27:53.40:0,53,491	1/1:9,11:23:19.84:406,20,0	1/1:8,12:22:27.31:270,27,0	0/0:4,0:4:5.99:0,6,53	1/1:3,4:8:17.96:190,18,0	0/0:8,0:8:8.44:0,8,63	0/0:18,0:18:38.62:0,39,326	0/0:26,0:26:38.67:0,39,114	0/0:30,0:30:32.33:0,32,135	0/0:25,0:24:8.32:0,8,47	0/0:12,0:10:17.65:0,18,51
chr10	5438127	.	T	TC	4845.44	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=10.037;DP=522;FS=2.793;HRun=0;HaplotypeScore=62.2279;InbreedingCoeff=0.9399;MQ=57.62;MQ0=23;MQRankSum=2.641;QD=27.69;ReadPosRankSum=5.242;VQSLOD=5.5420;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,36:34:63.14:790,63,0	0/0:7,0:6:11.63:0,12,149	0/0:19,0:10:18.90:0,19,142	0/0:6,0:2:2.90:0,3,16	0/0:30,0:30:79.56:0,80,1092	0/0:22,0:22:53.98:0,54,634	0/0:7,0:5:15.04:0,15,193	1/1:7,22:22:63.10:715,63,0	0/0:13,0:13:39.06:0,39,487	0/0:21,0:17:48.13:0,48,605	0/0:25,0:25:60.05:0,60,708	0/0:11,0:11:21.04:0,21,247	0/0:17,0:17:51.12:0,51,673	0/0:16,0:16:45.04:0,45,544	1/1:0,16:15:33.10:413,33,0	0/0:10,0:10:26.84:0,27,204	0/0:34,0:32:87.27:0,87,1191	0/0:31,0:26:61.59:0,62,849	0/0:24,0:23:55.37:0,55,419	0/0:18,0:18:29.11:0,29,191	0/0:5,0:5:9.02:0,9,108	0/0:7,0:7:18.13:0,18,120	0/0:6,0:6:17.99:0,18,185	0/0:18,0:18:45.07:0,45,569	1/1:0,25:25:63.20:815,63,0	1/1:1,28:29:81.22:1012,81,0	1/1:1,24:24:57.18:732,57,0	1/1:4,10:12:12.48:368,12,0
chr10	5438538	.	G	GC	6873.10	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=3.643;DP=765;FS=3.660;HRun=6;HaplotypeScore=84.4697;InbreedingCoeff=0.9989;MQ=79.90;MQ0=0;MQRankSum=-3.277;QD=30.96;ReadPosRankSum=1.566;VQSLOD=5.4036;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,39:45:99:1321,105,0	0/0:8,0:8:21.02:0,21,207	0/0:35,0:35:65.50:0,66,701	0/0:27,0:26:40.73:0,41,579	0/0:30,0:30:81.17:0,81,819	0/0:19,0:19:51.11:0,51,520	0/0:38,0:38:99:0,99,1009	1/1:8,21:29:57.14:687,57,0	0/0:19,0:19:57.11:0,57,574	0/0:27,0:27:75.16:0,75,760	0/0:21,0:21:44.83:0,45,454	0/0:28,0:29:78.09:0,78,788	0/0:36,0:36:99:0,103,1039	0/0:32,0:32:90.19:0,90,910	1/1:1,29:30:81.26:1019,81,0	0/0:22,0:22:66.14:0,66,666	1/1:3,38:41:99:1359,108,0	0/0:14,0:14:39.06:0,39,389	0/0:19,0:19:51.09:0,51,512	0/0:28,0:28:81.17:0,81,819	0/0:37,0:37:99:0,99,982	0/0:37,0:37:90.16:0,90,904	0/0:31,0:31:84.15:0,84,840	0/0:34,0:34:90.20:0,90,918	1/1:2,18:20:42.13:525,42,0	1/1:1,25:26:75.18:908,75,0	1/1:2,21:23:60.19:753,60,0	1/1:0,8:8:24.08:302,24,0
chr10	5438796	.	G	GCTGGTCGAGTCA	28951.88	PASS	AB=0.688;AC=13;AF=0.232;AN=56;BaseQRankSum=-3.392;DP=788;FS=6.578;HRun=0;HaplotypeScore=260.1663;InbreedingCoeff=0.8980;MQ=68.50;MQ0=0;MQRankSum=-19.104;QD=124.79;ReadPosRankSum=0.366;VQSLOD=4.1588;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:26,24:53:96.33:5657,96,0	0/0:10,0:10:27.09:0,27,954	0/0:29,0:29:51.47:0,51,1926	0/0:35,0:34:87.28:0,87,2835	0/0:29,0:29:75.24:0,75,2536	0/0:19,0:19:54.19:0,54,1893	0/0:30,0:30:84.29:0,84,3031	1/1:39,7:47:99:6142,132,0	0/0:26,0:26:78.27:0,78,2703	0/0:22,0:22:66.21:0,66,2135	0/0:13,0:13:36.12:0,36,1305	0/0:33,0:33:93.29:0,93,3221	0/0:34,0:34:90.29:0,90,3103	0/0:23,0:23:69.24:0,69,2489	1/1:19,26:48:99:6388,108,0	0/0:34,0:33:96.33:0,96,3431	0/0:29,0:29:81.26:0,81,2910	0/0:17,0:17:48.16:0,48,1791	0/0:24,0:24:69.24:0,69,2228	0/0:35,0:35:81.28:0,81,2928	0/0:39,0:39:99:0,111,3753	0/0:31,0:31:93.32:0,93,3308	0/0:24,0:24:63.22:0,63,2266	0/0:20,0:20:51.17:0,51,1836	1/1:8,7:16:36.12:2134,36,0	0/1:18,13:33:99:3788,0,252	1/1:11,15:29:63.22:3747,63,0	1/1:1,5:6:18.06:1096,18,0
chr10	5439648	.	CCAAGGGG	C	713.93	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.520;DP=628;FS=1.232;HRun=0;HaplotypeScore=141.3298;InbreedingCoeff=0.9969;MQ=61.63;MQ0=11;MQRankSum=-5.311;QD=35.70;ReadPosRankSum=1.607;VQSLOD=3.7020;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:50:99:0,151,6076	0/0:12,0:12:36.12:0,36,1313	0/0:28,0:14:36.12:0,36,1311	0/0:19,0:14:39.12:0,39,1436	0/0:22,0:21:63.20:0,63,2465	0/0:24,0:23:66.23:0,66,2660	0/0:20,0:20:60.19:0,60,2356	0/0:30,0:23:63.21:0,63,2303	0/0:27,0:26:78.25:0,78,3099	0/0:24,0:24:69.23:0,69,2680	0/0:15,0:15:41.77:0,42,1638	0/0:24,0:24:66.23:0,66,2589	0/0:19,0:18:54.15:0,54,1865	0/0:21,0:21:63.22:0,63,2506	0/0:24,0:24:66.23:0,66,2482	0/0:18,0:18:54.15:0,54,1990	1/1:4,16:19:30.10:808,30,0	0/0:16,0:14:42.14:0,42,1697	0/0:15,0:15:43:0,43,1595	0/0:27,0:27:81.28:0,81,3228	0/0:39,0:36:99:0,99,3939	0/0:13,0:13:39.13:0,39,1454	0/0:19,0:19:57.20:0,57,2300	0/0:30,0:29:81.23:0,81,3050	0/0:13,0:13:39.08:0,39,1397	0/0:20,0:20:60.21:0,60,2370	0/0:30,0:29:87.28:0,87,3343	0/0:8,0:8:24.08:0,24,984
chr10	5441043	.	A	AG	1480.14	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=9.941;DP=582;FS=46.736;HRun=1;HaplotypeScore=126.0194;InbreedingCoeff=0.9496;MQ=72.14;MQ0=6;MQRankSum=-11.273;QD=21.45;ReadPosRankSum=-2.643;VQSLOD=0.1582;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,3:16:31.41:376,31,0	0/0:12,0:12:36.12:0,36,467	0/0:25,0:23:66.20:0,66,839	0/0:16,0:16:47.36:0,47,567	0/0:26,0:26:78.25:0,78,1013	0/0:23,0:23:54.17:0,54,701	0/0:28,0:28:75.24:0,75,973	1/1:7,0:4:8.57:58,9,0	0/0:30,0:29:69.22:0,69,896	0/0:27,0:26:78.25:0,78,1013	0/0:27,0:27:63.20:0,63,818	0/0:25,0:25:63.20:0,63,818	0/0:24,0:24:60.12:0,60,778	0/0:27,0:27:69.22:0,69,896	1/1:10,1:11:30.57:378,31,0	0/0:24,0:24:51.17:0,51,662	0/0:34,0:34:90.29:0,90,1168	0/0:20,0:19:45.15:0,45,584	0/0:12,0:11:33.11:0,33,429	0/0:15,0:14:39.13:0,39,506	0/0:47,0:46:99:0,135,1737	0/0:19,0:19:48.16:0,48,622	0/0:25,0:24:72.23:0,72,934	0/0:26,0:26:63.20:0,63,818	1/1:15,0:15:16.74:383,17,0	1/1:9,0:9:14.69:148,15,0	1/1:10,0:10:23.99:285,24,0	1/1:1,0:1:3.01:41,3,0
chr10	5441062	.	TAGAC	T	2524.01	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=9.604;DP=604;FS=24.510;HRun=0;HaplotypeScore=99.4523;InbreedingCoeff=0.9515;MQ=83.42;MQ0=0;MQRankSum=-1.959;QD=41.38;ReadPosRankSum=2.307;VQSLOD=1.5695;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:45.15:0,45,1194	0/0:10,0:10:30.09:0,30,760	0/0:28,0:28:84.22:0,84,2068	0/0:25,0:25:44.21:0,44,1610	0/0:27,0:27:75.26:0,75,2054	0/0:22,0:22:48.16:0,48,1314	0/0:28,0:28:78.27:0,78,2010	0/0:16,0:14:39.13:0,39,1068	0/0:29,0:29:78.27:0,78,2137	0/0:25,0:25:69.23:0,69,1834	0/0:22,0:22:66.23:0,66,1702	0/0:26,0:26:63.20:0,63,1655	0/0:26,0:26:60.06:0,60,1595	0/0:24,0:24:56.53:0,57,1456	0/0:15,0:15:39.13:0,39,1055	1/1:1,24:25:51.17:988,51,0	0/0:35,0:35:96.33:0,96,2567	0/0:18,0:17:48.14:0,48,1255	1/1:1,8:8:21.07:396,21,0	1/1:0,14:14:36.08:660,36,0	0/0:51,0:51:99:0,148,3970	1/1:0,13:13:33.11:640,33,0	0/0:19,0:19:54.18:0,54,1435	0/0:24,0:24:57.20:0,57,1502	0/0:20,0:20:51.18:0,51,1392	0/0:18,0:18:48.16:0,48,1245	0/0:11,0:11:30.10:0,30,819	0/0:1,0:1:3.01:0,3,82
chr10	5442103	.	AGATGAT	A	5585.74	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=12.828;DP=796;FS=21.452;HRun=0;HaplotypeScore=185.2745;InbreedingCoeff=0.9886;MQ=77.21;MQ0=2;MQRankSum=-7.708;QD=30.36;ReadPosRankSum=-0.335;VQSLOD=2.8490;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:25,12:37:74.58:859,75,0	0/0:15,0:15:30.10:0,30,764	0/0:37,0:32:56.77:0,57,1121	0/0:41,0:37:73.68:0,74,1645	0/0:24,0:24:52.05:0,52,1411	0/0:27,0:27:66.19:0,66,1922	0/0:25,0:25:63.17:0,63,1628	1/1:5,26:31:78.05:989,78,0	0/0:33,0:33:90.25:0,90,2758	0/0:34,0:33:95.82:0,96,2340	0/0:15,0:15:32.89:0,33,666	0/0:34,0:34:93.27:0,93,2822	0/0:31,0:31:83.60:0,84,2464	0/0:32,0:32:86.95:0,87,2448	1/1:1,28:29:48.12:978,48,0	0/0:28,0:28:75.24:0,75,2196	0/0:26,0:26:75.16:0,75,1988	0/0:22,0:21:60.15:0,60,1705	0/0:27,0:27:63.20:0,63,1376	0/0:16,0:16:42.10:0,42,897	0/0:57,0:59:99:0,165,3943	0/0:19,0:19:39.09:0,39,823	0/0:27,0:27:66.21:0,66,1725	0/0:40,0:40:99:0,111,3523	1/1:4,23:27:24.08:528,24,0	1/1:4,12:16:33.02:571,33,0	1/1:2,35:37:72.04:1532,72,0	1/1:6,1:7:8.96:128,9,0
chr10	5442132	.	GTGGTGA	G	2972.52	PASS	AB=1.000;AC=12;AF=0.214;AN=56;BaseQRankSum=10.986;DP=748;FS=30.638;HRun=0;HaplotypeScore=182.2404;InbreedingCoeff=0.3315;MQ=57.63;MQ0=13;MQRankSum=-11.139;QD=14.02;ReadPosRankSum=0.292;VQSLOD=1.5665;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,30:35:41.58:515,42,0	0/0:10,0:10:24.06:0,24,699	0/0:37,0:25:63.21:0,63,1320	0/0:30,0:25:60.20:0,60,1335	0/0:23,0:23:62.85:0,63,1531	0/0:26,0:26:69.18:0,69,1984	0/0:22,0:22:63.19:0,63,1653	0/1:31,0:29:99:145,0,130	0/0:32,0:32:96.33:0,96,3028	0/0:26,0:25:72.14:0,72,2060	0/0:10,0:9:24.08:0,24,632	0/0:37,0:37:99:0,108,3032	0/0:30,0:30:90.27:0,90,2455	0/0:30,0:30:74.46:0,74,2183	1/1:27,0:26:14.14:649,14,0	0/0:32,0:32:10.30:0,10,1283	0/0:26,0:26:75.21:0,75,2008	0/0:26,0:25:75.21:0,75,2112	0/1:19,0:17:59.35:59,0,412	0/1:15,0:14:7.55:8,0,414	0/0:60,0:58:99:0,150,3791	0/0:17,0:15:3.04:0,3,364	0/0:24,0:24:60.17:0,60,1602	0/0:38,0:38:99:0,108,3255	0/1:19,0:19:39.80:384,0,40	0/1:22,0:21:99:270,0,115	1/1:40,0:40:10.07:1043,10,0	0/1:4,0:4:15:63,0,15
chr10	5442556	.	CAA	C	1599.81	PASS	AC=10;AF=0.208;AN=48;BaseQRankSum=8.134;DP=421;FS=9.487;HRun=15;HaplotypeScore=79.8563;InbreedingCoeff=0.9555;MQ=58.15;MQ0=16;MQRankSum=0.808;QD=17.02;ReadPosRankSum=5.169;VQSLOD=2.3362;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,27:32:74.96:659,75,0	0/0:6,0:6:12.04:0,12,163	0/0:25,0:4:8.99:0,9,89	0/0:17,0:8:15.53:0,16,171	0/0:18,0:21:41.56:0,42,494	0/0:20,0:21:50.65:0,51,647	0/0:13,0:14:36.11:0,36,455	./.	0/0:9,0:11:20.51:0,21,207	0/0:12,0:14:29.47:0,29,289	0/0:24,0:24:54.15:0,54,698	0/0:11,0:11:24.03:0,24,291	0/0:8,0:10:18.01:0,18,212	0/0:7,0:6:9.03:0,9,121	0/0:7,0:19:23.52:0,24,216	1/1:0,9:9:26.99:238,27,0	0/0:44,0:44:71.79:0,72,572	0/0:14,0:15:36.01:0,36,407	1/1:6,12:17:35.81:316,36,0	1/1:3,16:19:41.86:369,42,0	0/0:16,0:17:29.51:0,30,324	1/1:6,9:15:20.77:184,21,0	0/0:13,0:16:35.58:0,36,428	0/0:13,0:15:35.09:0,35,421	0/0:9,0:16:22.86:0,23,229	./.	./.	./.
chr10	5442567	.	A	AC	707.76	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=1.744;DP=467;FS=18.608;HRun=0;HaplotypeScore=109.1488;InbreedingCoeff=0.8577;MQ=64.90;MQ0=6;MQRankSum=0.109;QD=16.46;ReadPosRankSum=3.131;VQSLOD=4.6000;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:74.75:0,75,394	0/0:5,0:5:15.04:0,15,191	0/0:29,0:13:14.46:0,14,167	0/0:22,0:14:12.77:0,13,195	0/0:19,0:19:51.74:0,52,493	0/0:20,0:20:55.64:0,56,625	0/0:15,0:15:42.21:0,42,364	0/0:15,0:15:23.96:0,24,80	0/0:9,0:9:20.80:0,21,219	0/0:16,0:16:46.50:0,47,446	0/0:21,0:21:56.84:0,57,689	0/0:10,0:10:25.81:0,26,267	0/0:12,0:11:27.90:0,28,293	0/0:9,0:8:20.95:0,21,189	0/0:20,0:20:25.74:0,26,211	0/0:11,0:11:31.80:0,32,175	1/1:4,38:43:67.53:803,68,0	0/0:17,0:17:44.38:0,44,451	0/0:18,0:18:48.57:0,49,254	0/0:21,0:21:57:0,57,303	0/0:16,0:16:45.47:0,45,456	0/0:13,0:13:32.21:0,32,176	0/0:16,0:16:42.93:0,43,495	0/0:15,0:15:39.02:0,39,411	0/0:16,0:16:30.21:0,30,219	0/0:11,0:11:16.53:0,17,64	0/0:14,0:14:29.27:0,29,105	0/0:4,0:4:7.56:0,8,25
chr10	5443897	.	A	ACAGGTTTCTCTG	24054.95	PASS	AB=0.595;AC=15;AF=0.268;AN=56;BaseQRankSum=-6.271;DP=683;FS=4.612;HRun=0;HaplotypeScore=206.9647;InbreedingCoeff=0.9057;MQ=78.74;MQ0=0;MQRankSum=-15.658;QD=112.41;ReadPosRankSum=-2.127;VQSLOD=4.4926;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:15,24:48:99:5944,108,0	0/0:11,0:11:30.10:0,30,1079	0/0:16,0:16:44.17:0,44,1342	0/0:22,0:22:50.12:0,50,1591	0/0:26,0:26:75.26:0,75,2543	0/0:21,0:21:63.20:0,63,2162	0/0:23,0:23:66.21:0,66,2312	1/1:15,6:34:99:4557,99,0	0/0:32,0:32:96.33:0,96,3417	0/0:29,0:29:84.27:0,84,2807	0/0:11,0:11:30.10:0,30,1126	0/0:28,0:28:84.27:0,84,2976	0/0:28,0:28:81.28:0,81,2926	0/0:26,0:26:78.27:0,78,2694	1/1:7,14:36:54.19:3251,54,0	0/0:21,0:21:60.21:0,60,2233	1/1:7,6:18:33.11:1689,33,0	0/0:27,0:27:75.26:0,75,2579	0/0:25,0:25:72.25:0,72,2204	0/0:17,0:17:48.16:0,48,1579	0/0:38,0:38:99:0,108,3947	0/0:16,0:16:45.15:0,45,1592	0/0:16,0:16:45.15:0,45,1513	0/0:36,0:35:99:0,99,3528	1/1:4,7:17:29.87:1611,30,0	0/1:8,9:25:99:2683,0,155	1/1:7,13:31:60.21:3521,60,0	1/1:1,4:5:15.05:800,15,0
chr10	5445026	.	T	TAA	1846.82	PASS	AB=1.000;AC=13;AF=0.271;AN=48;BaseQRankSum=0.926;DP=356;FS=3.497;HRun=12;HaplotypeScore=50.9517;InbreedingCoeff=0.8911;MQ=52.82;MQ0=5;MQRankSum=-3.524;QD=18.65;ReadPosRankSum=-3.835;VQSLOD=1.5504;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	0/0:9,0:9:18:0,18,167	./.	./.	0/0:37,0:37:63.40:0,63,748	0/0:22,0:22:41.85:0,42,429	0/0:7,0:8:23.77:0,24,206	0/1:3,0:2:0:0,0,0	0/0:13,0:15:32.31:0,32,286	0/0:15,0:16:20.57:0,21,175	0/0:19,0:20:35.66:0,36,317	0/0:13,0:13:33.04:0,33,305	0/0:12,0:13:18.27:0,18,190	0/0:7,0:7:8.95:0,9,79	1/1:4,10:14:19.30:246,19,0	1/1:3,1:11:12.02:115,12,0	./.	0/0:13,0:12:23.96:0,24,222	1/1:8,2:21:38.99:398,39,0	1/1:5,1:20:45.01:433,45,0	0/0:4,0:4:5.99:0,6,56	1/1:2,1:4:6.01:71,6,0	0/0:11,0:11:27.01:0,27,250	0/0:8,0:7:11.94:0,12,111	1/1:5,18:24:59.58:754,60,0	0/0:16,0:17:38.72:0,39,345	0/0:18,0:18:38.93:0,39,361	0/0:14,0:13:20.86:0,21,194
chr10	5445128	.	G	GT	904.09	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.647;DP=497;FS=38.731;HRun=5;HaplotypeScore=70.8610;InbreedingCoeff=0.9236;MQ=77.97;MQ0=0;MQRankSum=-7.830;QD=25.11;ReadPosRankSum=-1.560;VQSLOD=0.8905;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,8:10:15.05:197,15,0	0/0:13,0:13:39.10:0,39,419	0/0:17,0:14:24.22:0,24,218	0/0:14,0:13:5.61:0,6,89	0/0:28,0:28:78.19:0,78,838	0/0:23,0:23:59.94:0,60,644	0/0:10,0:10:27.07:0,27,290	1/1:2,11:13:36.08:455,36,0	0/0:12,0:12:6.80:0,7,317	0/0:30,0:30:78.19:0,78,838	0/0:20,0:20:54.10:0,54,563	0/0:21,0:21:54.13:0,54,580	0/0:14,0:14:36.09:0,36,387	0/0:20,0:20:54.14:0,54,579	0/0:21,0:21:63.13:0,63,661	0/0:13,0:13:30.08:0,30,322	1/1:2,11:12:30.10:392,30,0	0/0:22,0:21:63.16:0,63,677	0/0:17,0:17:48.10:0,48,505	0/0:26,0:26:75.19:0,75,805	0/0:19,0:19:54.14:0,54,580	0/0:18,0:18:48.12:0,48,516	0/0:22,0:22:57.14:0,57,613	0/0:15,0:15:45.10:0,45,476	0/0:11,0:11:27.07:0,27,290	0/0:27,0:27:78.20:0,78,837	0/0:18,0:18:54.14:0,54,579	0/0:9,0:9:27.07:0,27,289
chr10	5445137	.	AAAAAAC	A	588.47	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=6.113;DP=528;FS=25.318;HRun=0;HaplotypeScore=130.1924;InbreedingCoeff=0.6384;MQ=77.67;MQ0=0;MQRankSum=-2.762;QD=15.90;ReadPosRankSum=-0.442;VQSLOD=1.3782;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:21.07:0,21,581	0/0:13,0:13:30.10:0,30,930	0/1:24,0:18:16.72:17,0,499	0/0:18,0:16:15.39:0,15,484	0/0:29,0:29:81.28:0,81,2605	0/0:24,0:24:54.18:0,54,1696	0/0:10,0:10:24.07:0,24,701	0/0:12,0:12:27.09:0,27,614	0/0:12,0:12:27.09:0,27,787	0/0:28,0:28:69.24:0,69,2194	0/0:24,0:24:60.12:0,60,1922	0/0:20,0:20:51.17:0,51,1402	0/0:20,0:20:48.16:0,48,1496	0/0:23,0:23:51.17:0,51,1628	0/0:26,0:26:72.25:0,72,2293	0/0:12,0:12:30.10:0,30,980	1/1:4,9:12:33.11:677,33,0	0/0:23,0:23:60.20:0,60,1744	0/0:22,0:22:51.17:0,51,1639	0/0:27,0:27:63.21:0,63,1907	0/0:20,0:20:51.17:0,51,1605	0/0:16,0:16:27.09:0,27,889	0/0:21,0:21:54.19:0,54,1786	0/0:16,0:16:45.15:0,45,1521	0/0:10,0:10:21.07:0,21,702	0/0:28,0:28:60.21:0,60,1863	0/0:19,0:19:54.19:0,54,1736	0/0:8,0:8:24.08:0,24,800
chr10	5445311	.	A	AC	1054.39	PASS	AB=0.649;AC=3;AF=0.054;AN=56;BaseQRankSum=3.289;DP=675;FS=5.352;HRun=2;HaplotypeScore=83.3293;InbreedingCoeff=-0.0593;MQ=57.02;MQ0=4;MQRankSum=-5.631;QD=10.14;ReadPosRankSum=-0.302;VQSLOD=1.3244;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:17,23:39:99:633,0,359	0/0:6,0:6:18.04:0,18,210	0/0:28,0:18:44.91:0,45,506	0/0:29,0:25:60.17:0,60,719	0/0:22,0:22:60.19:0,60,743	0/0:19,0:19:51.14:0,51,609	0/0:30,0:30:89.47:0,89,1070	0/1:23,14:35:99:485,0,367	0/0:23,0:23:66.19:0,66,805	0/0:29,0:29:87.26:0,87,1066	0/0:21,0:21:63.20:0,63,780	0/0:23,0:23:69.22:0,69,855	0/0:22,0:22:64.44:0,64,782	0/0:17,0:17:51.16:0,51,631	0/0:33,0:33:99:0,99,1216	0/0:28,0:27:81.22:0,81,967	0/1:8,0:27:36.08:36,0,132	0/0:31,0:31:84.26:0,84,1038	0/0:22,0:22:54.15:0,54,645	0/0:19,0:19:51.14:0,51,609	0/0:33,0:33:96.24:0,96,1159	0/0:17,0:17:51.16:0,51,632	0/0:14,0:14:42.13:0,42,520	0/0:40,0:40:99:0,114,1376	0/0:15,0:15:42.13:0,42,521	0/0:24,0:24:67.54:0,68,559	0/0:16,0:16:23.04:0,23,214	0/0:10,0:10:8.90:0,9,59
chr10	5445315	.	A	ACCAAC	2594.73	PASS	AB=1.000;AC=10;AF=0.179;AN=56;BaseQRankSum=0.749;DP=692;FS=0.511;HRun=0;HaplotypeScore=133.1618;InbreedingCoeff=0.6865;MQ=55.72;MQ0=4;MQRankSum=-4.379;QD=16.12;ReadPosRankSum=3.114;VQSLOD=3.3804;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:39,0:38:29.89:237,0,30	0/0:5,0:5:15.05:0,15,296	0/0:30,0:20:35.10:0,35,431	0/0:26,0:21:41.23:0,41,580	0/0:26,0:26:66.15:0,66,1008	0/0:18,0:18:39.11:0,39,665	0/0:30,0:30:72.24:0,72,1192	0/1:38,0:36:15.89:16,0,231	0/0:21,0:21:54.18:0,54,1016	0/0:29,0:29:84.28:0,84,1428	0/0:22,0:22:54.15:0,54,915	0/0:23,0:23:66.21:0,66,1216	0/0:23,0:23:57.17:0,57,1009	0/0:18,0:18:42.11:0,42,713	0/0:35,0:35:84.27:0,84,1500	0/0:30,0:29:84.24:0,84,1348	1/1:24,0:24:2.91:106,3,0	0/0:31,0:31:84.13:0,84,1432	0/0:23,0:23:48.15:0,48,712	0/0:18,0:18:51.17:0,51,866	0/0:33,0:33:87.22:0,87,1445	0/0:19,0:19:51.16:0,51,897	0/0:16,0:16:48.14:0,48,791	0/0:39,0:39:99:0,105,1919	0/0:16,0:16:42.12:0,42,725	1/1:3,22:25:63.21:1678,63,0	1/1:4,13:21:15.94:447,16,0	1/1:0,14:14:9.03:267,9,0
chr10	5445693	.	T	TTA	962.82	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.124;DP=603;FS=1.861;HRun=0;HaplotypeScore=78.9248;InbreedingCoeff=0.9988;MQ=78.70;MQ0=0;MQRankSum=-2.168;QD=38.51;ReadPosRankSum=1.963;VQSLOD=5.3370;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:96.33:0,96,1559	0/0:10,0:10:30.10:0,30,489	0/0:12,0:12:36.12:0,36,556	0/0:15,0:15:42.05:0,42,595	0/0:35,0:35:99:0,105,1635	0/0:23,0:23:69.22:0,69,1090	0/0:17,0:17:51.17:0,51,824	0/0:24,0:24:72.23:0,72,1128	0/0:19,0:19:54.17:0,54,857	0/0:29,0:29:81.28:0,81,1319	0/0:19,0:19:57.17:0,57,865	0/0:20,0:20:60.17:0,60,926	0/0:18,0:18:54.18:0,54,876	0/0:20,0:20:60.19:0,60,954	0/0:18,0:18:54.18:0,54,878	0/0:15,0:15:45.15:0,45,731	1/1:1,24:25:60.21:1058,60,0	0/0:16,0:16:39.09:0,39,590	0/0:21,0:21:60.18:0,60,930	0/0:33,0:33:99:0,99,1599	0/0:12,0:12:36.12:0,36,587	0/0:21,0:21:63.21:0,63,1004	0/0:30,0:30:90.29:0,90,1420	0/0:11,0:11:33.11:0,33,530	0/0:23,0:23:69.22:0,69,1099	0/0:28,0:28:81.26:0,81,1277	0/0:41,0:41:99:0,114,1841	0/0:15,0:15:42.14:0,42,685
chr10	5445923	.	C	CAGA	4694.60	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=3.069;DP=566;FS=2.992;HRun=0;HaplotypeScore=83.1717;InbreedingCoeff=0.9830;MQ=71.16;MQ0=0;MQRankSum=-6.557;QD=59.43;ReadPosRankSum=-1.226;VQSLOD=6.4824;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,26:30:63.22:1472,63,0	0/0:5,0:5:12.04:0,12,205	0/0:21,0:19:53.21:0,53,857	0/0:18,0:18:48.16:0,48,809	0/0:18,0:18:54.17:0,54,912	0/0:11,0:11:33.10:0,33,553	0/0:29,0:29:87.30:0,87,1522	1/1:2,23:27:78.25:1734,78,0	0/0:19,0:19:57.17:0,57,952	0/0:25,0:25:69.21:0,69,1142	0/0:5,0:5:15.04:0,15,237	0/0:20,0:20:57.20:0,57,996	0/0:23,0:23:66.20:0,66,1077	0/0:27,0:27:81.27:0,81,1391	0/0:27,0:27:78.27:0,78,1376	0/0:18,0:18:54.18:0,54,944	1/1:1,21:22:63.22:1488,63,0	0/0:19,0:20:55.07:0,55,954	0/0:12,0:12:36.08:0,36,600	0/0:15,0:15:42.14:0,42,741	0/0:28,0:28:81.26:0,81,1377	0/0:9,0:9:27.09:0,27,476	0/0:17,0:17:51.17:0,51,895	0/0:39,0:39:99:0,117,2025	0/0:16,0:16:45.15:0,45,778	0/0:23,0:23:69.22:0,69,1162	0/0:31,0:31:87.30:0,87,1515	0/0:11,0:11:33.11:0,33,582
chr10	5446485	.	G	GT	759.48	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-3.147;DP=630;FS=6.235;HRun=1;HaplotypeScore=77.9065;InbreedingCoeff=0.9964;MQ=81.16;MQ0=0;MQRankSum=-1.009;QD=34.52;ReadPosRankSum=2.685;VQSLOD=3.6401;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,138,1770	0/0:10,0:10:30.10:0,30,389	0/0:21,0:21:60.19:0,60,759	0/0:23,0:23:66.40:0,66,749	0/0:30,0:30:87.27:0,87,1113	0/0:20,0:20:57.18:0,57,739	0/0:24,0:24:72.22:0,72,918	0/0:25,0:25:72.23:0,72,934	0/0:28,0:28:84.27:0,84,1087	0/0:13,0:13:39.13:0,39,506	0/0:17,0:17:45.15:0,45,584	0/0:22,0:22:66.20:0,66,843	0/0:24,0:24:69.22:0,69,895	0/0:17,0:17:51.16:0,51,657	0/0:25,0:25:75.24:0,75,974	0/0:8,0:8:24.06:0,24,298	1/1:1,21:22:57.19:854,57,0	0/0:19,0:19:57.18:0,57,737	0/0:22,0:22:66.21:0,66,856	0/0:28,0:28:84.27:0,84,1090	0/0:21,0:21:63.20:0,63,818	0/0:30,0:30:87.13:0,87,1085	0/0:23,0:23:66.18:0,66,842	0/0:22,0:22:63.12:0,63,767	0/0:24,0:24:72.23:0,72,931	0/0:21,0:21:63.20:0,63,806	0/0:30,0:30:84.27:0,84,1087	0/0:13,0:13:27.09:0,27,350
chr10	5446510	.	T	TG	2199.65	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.429;DP=620;FS=11.927;HRun=6;HaplotypeScore=86.0190;InbreedingCoeff=0.9139;MQ=78.21;MQ0=0;MQRankSum=-0.985;QD=31.42;ReadPosRankSum=-1.595;VQSLOD=2.4872;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,44:49:99:1604,129,0	0/0:6,0:6:15.03:0,15,153	0/0:20,0:20:12.72:0,13,302	0/0:18,1:18:4.48:0,4,343	0/0:23,0:23:63.14:0,63,642	0/0:17,0:17:45.08:0,45,453	0/0:27,0:27:78.16:0,78,788	1/1:1,20:21:57.18:717,57,0	0/0:24,0:24:72.16:0,72,735	0/0:18,0:18:48.08:0,48,489	0/0:19,0:19:54.11:0,54,544	0/0:24,0:24:66.15:0,66,673	0/0:29,0:29:78.16:0,78,789	0/0:24,0:24:69.16:0,69,703	0/0:24,0:24:63.14:0,63,643	0/0:14,0:14:36.07:0,36,361	0/0:21,0:21:51.10:0,51,514	0/0:21,0:21:60.07:0,60,593	0/0:24,0:24:57.12:0,57,581	0/0:19,0:19:54.11:0,54,543	0/0:27,0:27:72.15:0,72,734	0/0:28,0:28:81.18:0,81,826	0/0:18,0:18:48.11:0,48,490	0/0:27,0:27:72.16:0,72,735	0/0:23,0:23:66.15:0,66,673	0/0:16,0:16:45.10:0,45,459	0/0:27,0:27:75.17:0,75,765	0/0:11,0:11:33.08:0,33,337
chr10	5446815	.	GGAGAGA	G	1654.31	PASS	AB=1.000;AC=8;AF=0.143;AN=56;BaseQRankSum=7.432;DP=758;FS=5.319;HRun=0;HaplotypeScore=176.7078;InbreedingCoeff=0.7472;MQ=69.62;MQ0=13;MQRankSum=-5.095;QD=11.57;ReadPosRankSum=0.312;VQSLOD=2.2248;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:16.53:0,17,249	0/0:9,0:10:21.04:0,21,488	0/1:40,0:18:5.94:6,0,119	0/1:56,0:30:0.54:1,0,633	0/0:31,0:33:72.18:0,72,1901	0/0:17,0:17:48.15:0,48,1440	0/0:30,0:30:78.19:0,78,2002	0/0:34,0:31:58.05:0,58,1417	0/0:19,0:21:57.10:0,57,1525	0/0:27,0:30:70.12:0,70,1930	0/0:17,0:19:48.14:0,48,1272	0/0:31,0:35:90.29:0,90,2685	0/0:23,0:28:54.17:0,54,1429	0/0:39,0:42:99:0,99,2632	0/0:16,0:43:27.08:0,27,642	0/0:24,0:24:18.47:0,18,370	0/0:10,0:21:12.51:0,13,382	0/0:24,0:26:63.20:0,63,1837	0/0:25,0:21:33.57:0,34,782	0/0:14,0:13:15.47:0,15,191	0/0:28,0:28:65.86:0,66,1789	0/0:25,0:24:24.44:0,24,242	0/0:24,0:25:53.47:0,53,1451	0/0:30,0:31:71.51:0,72,2053	0/0:20,0:18:6:0,6,95	1/1:2,13:16:42.13:837,42,0	1/1:4,18:23:27.08:530,27,0	1/1:1,6:8:20.74:425,21,0
chr10	5447349	.	A	ATGTGCGGGTG	7205.33	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=3.502;DP=772;FS=4.783;HRun=0;HaplotypeScore=245.2236;InbreedingCoeff=0.6967;MQ=69.82;MQ0=1;MQRankSum=-12.769;QD=35.85;ReadPosRankSum=-2.151;VQSLOD=3.8337;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:40,0:40:20.81:678,21,0	0/0:14,0:14:39.05:0,39,1078	0/0:36,0:32:67.80:0,68,1809	0/0:38,0:35:81.99:0,82,1905	0/0:31,0:31:90.29:0,90,2747	0/0:26,0:26:69.17:0,69,1820	0/0:46,0:46:99:0,123,3398	1/1:35,0:35:42.45:1930,42,0	0/0:27,0:27:68.58:0,69,1900	0/0:21,0:21:60.21:0,60,1854	0/0:15,0:15:45.14:0,45,1293	0/0:24,0:24:66.21:0,66,1931	0/0:24,0:24:66.21:0,66,2024	0/0:32,0:32:81.26:0,81,2431	1/1:4,18:26:48.16:2185,48,0	0/1:20,0:20:99:162,0,344	1/1:20,0:20:20.92:579,21,0	0/0:33,0:33:87.19:0,87,2328	0/1:19,0:18:99:171,0,132	0/0:11,0:11:20.94:0,21,199	0/0:67,0:67:99:0,196,5563	0/1:21,0:20:88.20:88,0,278	0/0:17,0:17:48.13:0,48,1232	0/0:45,0:45:99:0,107,3169	1/1:1,16:20:29.93:1412,30,0	0/0:27,0:27:66.22:0,66,1934	0/0:24,0:24:63.17:0,63,1758	0/0:13,0:13:36.11:0,36,1038
chr10	5447356	.	T	TGCGTGTGCGC	7852.21	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=-0.251;DP=790;FS=0.901;HRun=0;HaplotypeScore=243.7749;InbreedingCoeff=0.8661;MQ=68.10;MQ0=1;MQRankSum=-7.377;QD=48.77;ReadPosRankSum=-2.371;VQSLOD=4.1053;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,29:47:17.80:813,18,0	0/0:14,0:14:39.11:0,39,1101	0/0:34,0:30:73.26:0,73,1851	0/0:36,0:33:80.81:0,81,2033	0/0:30,0:30:90.29:0,90,2806	0/0:25,0:25:72.18:0,72,1938	0/0:49,0:49:99:0,147,3539	1/1:12,24:46:99:3957,130,0	0/0:25,0:25:68.70:0,69,1868	0/0:24,0:24:69.21:0,69,1981	0/0:16,0:16:45.14:0,45,1344	0/0:26,0:26:75.20:0,75,2074	0/0:24,0:24:72.20:0,72,2163	0/0:29,0:29:87.26:0,87,2511	1/1:24,0:24:16.16:1280,16,0	0/0:19,0:19:40.15:0,40,1168	1/1:4,0:23:20.93:928,21,0	0/0:30,0:30:87.18:0,87,2326	0/0:24,0:23:47.96:0,48,809	0/0:11,0:11:21.07:0,21,632	0/0:73,0:73:99:0,210,5890	0/0:21,0:20:43.83:0,44,1193	0/0:16,0:16:48.15:0,48,1278	0/0:42,0:42:99:0,116,3362	0/1:21,0:21:13.32:874,0,13	0/0:26,0:26:72.23:0,72,2042	0/0:21,0:21:57.20:0,57,1717	0/0:14,0:14:39.12:0,39,1133
chr10	5447626	.	T	TTA	2784.03	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-10.272;DP=621;FS=3.950;HRun=0;HaplotypeScore=75.3142;InbreedingCoeff=0.9889;MQ=90.10;MQ0=0;MQRankSum=-1.847;QD=40.94;ReadPosRankSum=-0.371;VQSLOD=5.0902;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:72.23:0,72,958	0/0:17,0:17:51.14:0,51,670	0/0:23,0:23:54.09:0,54,662	0/0:25,0:25:50.95:0,51,666	0/0:22,0:22:63.21:0,63,852	0/0:21,0:21:54.18:0,54,731	0/0:23,0:23:63.21:0,63,853	0/0:29,0:29:75.25:0,75,1013	0/0:17,0:17:42.11:0,42,535	0/0:23,0:23:57.15:0,57,752	0/0:18,0:18:45.15:0,45,609	0/0:14,0:14:39.13:0,39,527	0/0:23,0:23:63.20:0,63,834	0/0:21,0:21:60.20:0,60,809	0/0:24,0:24:60.17:0,60,779	0/0:19,0:19:54.17:0,54,713	0/0:21,0:21:54.18:0,54,730	0/0:32,0:32:87.29:0,87,1172	0/0:20,0:20:57.17:0,57,751	0/0:20,0:20:57.18:0,57,755	0/0:22,0:22:60.20:0,60,811	0/0:24,0:24:57.19:0,57,770	0/0:19,0:19:54.18:0,54,730	0/0:24,0:24:69.22:0,69,918	0/0:27,0:27:81.27:0,81,1096	1/1:5,27:34:49.68:1412,50,0	1/1:3,25:28:75.26:1301,75,0	1/1:0,6:6:12.04:210,12,0
chr10	5447749	.	ACT	A	2650.47	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=9.909;DP=632;FS=2.213;HRun=0;HaplotypeScore=76.7016;InbreedingCoeff=0.9939;MQ=85.81;MQ0=1;MQRankSum=-2.048;QD=36.81;ReadPosRankSum=-0.461;VQSLOD=5.2663;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:87.28:0,87,1598	0/0:5,0:5:15.05:0,15,280	0/0:18,0:18:44.33:0,44,859	0/0:27,0:27:61.70:0,62,1062	0/0:45,0:45:99:0,132,2374	0/0:24,0:24:72.20:0,72,1281	0/0:22,0:22:66.21:0,66,1198	0/0:32,0:32:84.29:0,84,1561	0/0:28,0:28:84.29:0,84,1573	0/0:24,0:25:75.25:0,75,1380	0/0:25,0:25:72.25:0,72,1348	0/0:21,0:21:63.22:0,63,1172	0/0:21,0:21:63.22:0,63,1179	0/0:23,0:23:69.24:0,69,1281	0/0:26,0:26:75.26:0,75,1405	1/1:1,9:10:21.07:309,21,0	0/0:29,0:29:87.28:0,87,1587	0/0:17,0:17:48.15:0,48,866	1/1:1,20:21:57.15:780,57,0	1/1:0,16:16:48.16:706,48,0	0/0:27,0:27:81.28:0,81,1510	1/1:0,25:24:69.23:1016,69,0	0/0:21,0:21:60.21:0,60,1123	0/0:23,0:23:69.24:0,69,1279	0/0:16,0:16:48.16:0,48,883	0/0:24,0:24:69.23:0,69,1264	0/0:24,0:24:72.20:0,72,1312	0/0:8,0:8:24.08:0,24,449
chr10	5447893	.	CAT	C	7139.21	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=16.912;DP=629;FS=3.350;HRun=0;HaplotypeScore=91.7438;InbreedingCoeff=0.9967;MQ=75.22;MQ0=2;MQRankSum=-2.191;QD=37.97;ReadPosRankSum=2.923;VQSLOD=6.7690;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,39:39:99:1548,108,0	0/0:12,0:12:36.12:0,36,649	0/0:13,0:13:36.11:0,36,588	0/0:10,0:10:24.08:0,24,415	0/0:32,0:32:93.32:0,93,1697	0/0:27,0:27:75.26:0,75,1375	0/0:20,0:20:54.19:0,54,980	0/0:33,0:33:96.31:0,96,1693	0/0:18,0:18:54.19:0,54,981	0/0:28,0:28:81.28:0,81,1483	0/0:27,0:27:81.28:0,81,1457	0/0:17,0:17:51.15:0,51,897	0/0:16,0:16:48.16:0,48,880	0/0:24,0:24:66.21:0,66,1169	1/1:0,24:23:66.22:945,66,0	1/1:1,21:22:60.20:860,60,0	0/0:17,0:17:51.17:0,51,911	0/0:19,0:19:54.19:0,54,984	1/1:0,20:19:57.18:801,57,0	1/1:2,26:28:69.19:966,69,0	0/0:23,0:22:66.23:0,66,1202	1/1:1,26:27:69.23:989,69,0	0/0:27,0:27:81.28:0,81,1446	0/0:18,0:18:54.19:0,54,979	1/1:0,28:28:72.24:1032,72,0	0/0:20,0:20:57.20:0,57,1041	0/0:35,0:35:99:0,99,1777	0/0:5,0:5:15.05:0,15,275
chr10	5448089	.	TG	T	4396.13	PASS	AB=0.680;AC=12;AF=0.214;AN=56;BaseQRankSum=16.860;DP=716;FS=0.000;HRun=4;HaplotypeScore=133.0513;InbreedingCoeff=0.7839;MQ=67.81;MQ0=0;MQRankSum=-9.525;QD=23.26;ReadPosRankSum=1.414;VQSLOD=3.4027;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,38:44:99:1222,102,0	0/0:13,0:13:36.12:0,36,503	0/0:21,0:22:39.17:0,39,537	0/0:18,0:20:20.97:0,21,426	0/0:42,0:42:99:0,120,1677	0/0:24,0:23:69.23:0,69,966	0/0:32,0:32:96.30:0,96,1325	0/0:28,0:28:81.27:0,81,1134	0/0:20,0:20:60.20:0,60,837	0/0:32,0:32:93.29:0,93,1283	0/0:21,0:21:35.52:0,36,737	0/0:18,0:18:51.17:0,51,714	0/0:25,0:25:69.23:0,69,965	0/0:30,0:30:90.30:0,90,1260	0/1:29,23:52:99:698,0,957	1/1:4,24:28:72.22:862,72,0	0/0:20,0:20:51.06:0,51,649	0/0:29,0:29:84.28:0,84,1173	1/1:3,9:11:27.04:308,27,0	1/1:0,18:18:51.16:611,51,0	0/0:22,0:22:63.12:0,63,846	1/1:0,11:11:30.09:359,30,0	0/0:25,0:25:72.24:0,72,1007	0/0:45,0:44:99:0,132,1809	0/1:12,12:24:99:335,0,313	0/0:30,0:30:90.30:0,90,1253	0/0:24,0:24:72.24:0,72,999	0/0:5,0:5:15.05:0,15,210
chr10	5448110	.	CAGGAGAAGA	C	7563.10	PASS	AB=0.729;AC=12;AF=0.214;AN=56;BaseQRankSum=15.199;DP=753;FS=2.844;HRun=0;HaplotypeScore=248.2980;InbreedingCoeff=0.7872;MQ=67.82;MQ0=0;MQRankSum=-12.070;QD=39.39;ReadPosRankSum=-0.885;VQSLOD=4.2095;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:20,16:36:51.16:1282,51,0	0/0:9,0:9:27.09:0,27,1271	0/0:23,0:25:44.40:0,44,1495	0/0:25,0:24:61.62:0,62,2082	0/0:35,0:35:99:0,105,4829	0/0:23,0:23:66.23:0,66,3048	0/0:24,0:24:63.20:0,63,2829	0/0:31,0:31:60.20:0,60,2570	0/0:27,0:27:72.25:0,72,3268	0/0:35,0:35:99:0,102,4553	0/0:22,0:22:60.19:0,60,2714	0/0:20,0:20:57.20:0,57,2632	0/0:30,0:30:90.31:0,90,4088	0/0:36,0:36:93.32:0,93,4274	0/1:33,27:60:99:1742,0,2991	1/1:10,16:26:63.20:1651,63,0	0/0:25,0:25:66.19:0,66,2717	0/0:32,0:32:90.25:0,90,3731	1/1:5,13:16:32.93:571,33,0	1/1:4,14:18:36.06:929,36,0	0/0:26,0:26:78.27:0,78,3494	1/1:2,12:14:39.01:903,39,0	0/0:27,0:27:75.26:0,75,3423	0/0:42,0:42:99:0,111,5135	0/1:14,6:20:99:485,0,1262	0/0:29,0:29:81.28:0,81,3754	0/0:27,0:27:75.26:0,75,3536	0/0:8,0:8:24.08:0,24,1132
chr10	5448888	.	TAGTC	T	4649.86	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=12.931;DP=643;FS=14.789;HRun=0;HaplotypeScore=101.8090;InbreedingCoeff=0.9971;MQ=64.74;MQ0=6;MQRankSum=-1.683;QD=43.05;ReadPosRankSum=2.607;VQSLOD=4.8171;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,30:33:63.22:1198,63,0	0/0:6,0:6:18.06:0,18,493	0/0:24,0:19:48.16:0,48,1288	0/0:33,0:22:60.18:0,60,1525	0/0:24,0:24:69.24:0,69,1875	0/0:21,0:21:60.21:0,60,1610	0/0:21,0:20:48.16:0,48,1249	0/0:39,0:39:99:0,117,3158	0/0:21,0:21:60.21:0,60,1642	0/0:17,0:17:51.18:0,51,1398	0/0:11,0:11:33.11:0,33,900	0/0:28,0:28:81.28:0,81,2176	0/0:21,0:21:63.22:0,63,1696	0/0:19,0:19:57.18:0,57,1493	0/0:40,0:40:99:0,111,3034	1/1:1,23:24:69.24:1337,69,0	0/0:31,0:30:90.31:0,90,2446	0/0:16,0:16:48.12:0,48,1251	1/1:5,7:11:21.07:407,21,0	1/1:2,16:18:42.09:767,42,0	0/0:25,0:25:75.23:0,75,1922	1/1:0,21:21:51.09:941,51,0	0/0:20,0:19:51.64:0,52,1387	0/0:19,0:19:57.20:0,57,1494	0/0:29,0:29:84.29:0,84,2290	0/0:28,0:27:75.25:0,75,1900	0/0:27,0:27:81.28:0,81,2191	0/0:15,0:13:39.13:0,39,1062
chr10	5449092	.	CAG	C	2889.67	PASS	AC=10;AF=0.192;AN=52;BaseQRankSum=11.030;DP=556;FS=2.291;HRun=0;HaplotypeScore=56.4459;InbreedingCoeff=0.9688;MQ=46.47;MQ0=32;MQRankSum=-2.333;QD=28.61;ReadPosRankSum=-1.534;VQSLOD=3.8164;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,28:25:66.22:1008,66,0	0/0:5,0:3:9.03:0,9,174	./.	./.	0/0:21,0:19:30.10:0,30,574	0/0:16,0:16:42.13:0,42,769	0/0:26,0:21:48.15:0,48,882	0/0:19,0:5:9.03:0,9,173	0/0:9,0:9:21.07:0,21,405	0/0:23,0:22:63.22:0,63,1214	0/0:16,0:13:18.06:0,18,347	0/0:24,0:23:63.20:0,63,1176	0/0:12,0:11:24.08:0,24,463	0/0:14,0:14:36.12:0,36,693	0/0:30,0:28:75.26:0,75,1447	1/1:0,20:17:39.13:596,39,0	0/0:36,0:31:66.23:0,66,1273	0/0:35,0:34:90.27:0,90,1686	1/1:1,20:13:39.02:542,39,0	1/1:1,12:10:30.10:457,30,0	0/0:11,0:11:27.09:0,27,521	1/1:1,14:13:30.10:457,30,0	0/0:12,0:11:27.09:0,27,516	0/0:23,0:19:48.15:0,48,885	0/0:43,0:40:78.27:0,78,1498	0/0:21,0:17:51.16:0,51,948	0/0:28,0:25:66.23:0,66,1254	0/0:13,0:11:33.11:0,33,636
chr10	5449230	.	GGA	G	331.90	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=0.071;DP=371;FS=11.765;HRun=0;HaplotypeScore=45.7121;InbreedingCoeff=0.3786;MQ=45.33;MQ0=26;MQRankSum=0.860;QD=5.27;ReadPosRankSum=-1.450;VQSLOD=0.3707;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,0:3:8.93:66,9,0	0/0:4,0:4:6.02:0,6,106	0/0:41,0:5:5.52:0,6,53	0/0:47,0:7:3.28:0,3,47	0/0:13,0:13:23.48:0,23,282	0/0:6,0:4:12.02:0,12,171	0/0:14,0:12:16.56:0,17,214	0/0:10,0:4:9.22:0,9,39	0/0:9,0:8:24.02:0,24,304	0/0:11,0:8:21.04:0,21,241	0/0:16,0:14:29.77:0,30,365	0/0:12,0:11:26.83:0,27,239	0/0:8,0:5:11.97:0,12,134	0/0:4,0:3:5.93:0,6,74	0/0:14,0:13:32.99:0,33,407	1/1:3,0:4:11.97:105,12,0	0/0:11,0:10:23.28:0,23,110	0/0:23,0:22:44.90:0,45,556	0/1:3,0:2:13.54:22,0,14	1/1:2,8:10:11.54:74,12,0	0/0:9,0:9:24:0,24,268	0/1:5,0:5:10.64:31,0,11	0/0:19,0:18:29.94:0,30,277	0/0:14,0:14:21.48:0,21,297	0/0:22,0:19:41.61:0,42,549	0/1:20,0:12:52.42:52,0,62	0/1:8,0:8:28.49:82,0,28	0/1:6,0:4:3.17:56,0,3
chr10	5449265	.	A	AAAAGAAAAG	803.91	PASS	AB=0.929;AC=5;AF=0.089;AN=56;BaseQRankSum=2.837;DP=534;FS=5.593;HRun=0;HaplotypeScore=131.3185;InbreedingCoeff=0.5769;MQ=57.74;MQ0=35;MQRankSum=-4.470;QD=26.80;ReadPosRankSum=0.085;VQSLOD=3.0764;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:5,5:8:18.06:711,18,0	0/0:7,0:7:12.02:0,12,206	0/0:84,0:16:38.87:0,39,559	0/0:72,0:23:15.30:0,15,350	0/0:20,0:20:51.14:0,51,1184	0/0:7,0:7:12.04:0,12,284	0/0:15,0:15:29.07:0,29,759	0/0:9,0:7:13.53:0,14,181	0/0:15,0:13:19.73:0,20,310	0/0:20,0:17:39.04:0,39,863	0/0:15,0:14:33.07:0,33,704	0/0:12,0:9:13.59:0,14,326	0/0:9,0:6:6.02:0,6,114	0/0:10,0:8:20.90:0,21,402	0/0:31,0:25:41.15:0,41,801	1/1:6,0:4:5.97:108,6,0	0/0:12,0:11:14.92:0,15,205	0/0:38,0:37:56.32:0,56,1185	0/1:12,0:7:10.08:103,0,10	0/0:5,0:5:10.08:0,10,37	0/0:10,0:10:24.87:0,25,471	0/0:4,0:3:2.98:0,3,28	0/0:14,0:13:27.06:0,27,575	0/0:21,0:21:34.19:0,34,743	0/0:30,0:27:68.64:0,69,1212	0/0:25,0:17:33.69:0,34,686	0/0:12,0:10:15.04:0,15,281	0/0:6,0:3:5.98:0,6,87
chr10	5449307	.	C	CT	3478.42	PASS	AB=0.757;AC=22;AF=0.407;AN=54;BaseQRankSum=4.991;DP=414;FS=16.909;HRun=0;HaplotypeScore=52.9928;InbreedingCoeff=0.5925;MQ=87.39;MQ0=7;MQRankSum=-6.967;QD=17.66;ReadPosRankSum=-0.015;VQSLOD=4.2484;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,4:4:9.03:143,9,0	0/0:11,0:11:33.11:0,33,461	0/1:25,3:27:71.05:71,0,800	0/1:22,7:30:99:208,0,592	0/0:20,0:20:57.15:0,57,773	0/0:10,0:10:21.07:0,21,289	0/0:23,0:23:60.20:0,60,836	1/1:1,3:3:6.02:96,6,0	0/0:18,0:18:36.12:0,36,501	0/0:21,0:21:60.20:0,60,837	0/0:12,0:12:36.12:0,36,503	0/0:11,0:11:27.09:0,27,376	0/0:10,0:10:24.08:0,24,333	0/0:9,0:9:18.06:0,18,248	0/1:20,12:29:99:221,0,603	1/1:0,6:5:12.04:191,12,0	1/1:1,14:11:24.08:383,24,0	0/0:27,0:26:72.24:0,72,1004	./.	1/1:1,3:4:9.03:143,9,0	0/0:13,0:13:39.13:0,39,545	1/1:0,4:2:6.02:95,6,0	0/0:15,0:15:39.13:0,39,545	0/0:16,0:16:36.12:0,36,500	0/1:9,16:22:99:607,0,230	1/1:1,20:14:0.16:553,0,0	1/1:1,15:10:27.09:430,27,0	1/1:0,8:8:21.07:335,21,0
chr10	5449399	.	GCTTTTCAGC	G	305.96	PASS	AC=6;AF=0.120;AN=50;BaseQRankSum=4.398;DP=420;FS=9.189;HRun=0;HaplotypeScore=87.4903;InbreedingCoeff=0.8542;MQ=42.70;MQ0=19;MQRankSum=-3.937;QD=34.00;ReadPosRankSum=1.791;VQSLOD=2.6246;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	0/0:10,0:9:27.08:0,27,1193	0/0:6,0:5:15.05:0,15,702	0/0:11,0:7:18.06:0,18,837	0/0:18,0:15:29.84:0,30,1190	0/0:12,0:10:27.09:0,27,1128	0/0:18,0:8:21.06:0,21,917	./.	0/0:14,0:13:27.09:0,27,1339	0/0:15,0:10:30.10:0,30,1430	0/0:14,0:12:33.11:0,33,1595	0/0:19,0:15:24.08:0,24,1185	0/0:12,0:12:27.04:0,27,1198	0/0:16,0:13:36.12:0,36,1669	0/0:35,0:28:54.05:0,54,2539	1/1:0,1:1:3.01:78,3,0	0/0:37,0:24:36.04:0,36,1358	0/0:28,0:19:42.13:0,42,1915	./.	1/1:1,4:4:11.97:250,12,0	0/0:25,0:19:42.14:0,42,1993	1/1:2,1:3:5.93:95,6,0	0/0:7,0:7:18.06:0,18,892	0/0:20,0:17:24.01:0,24,1028	0/0:32,0:26:63.22:0,63,3000	0/0:21,0:13:39.13:0,39,1907	0/0:16,0:12:30.09:0,30,1316	0/0:10,0:7:14.92:0,15,357
chr10	5449412	.	TGTGTCCTGCAGAGAGCACC	T	641.46	PASS	AC=6;AF=0.120;AN=50;BaseQRankSum=4.170;DP=471;FS=4.255;HRun=0;HaplotypeScore=133.1103;InbreedingCoeff=0.7794;MQ=43.97;MQ0=17;MQRankSum=-3.461;QD=106.91;ReadPosRankSum=1.528;VQSLOD=3.4808;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/0:7,0:6:18.06:0,18,1676	0/0:17,0:13:39.13:0,39,2999	0/0:16,0:10:27.09:0,27,1990	0/0:20,0:16:26.95:0,27,2051	0/0:11,0:8:18.06:0,18,1213	0/0:20,0:10:27.09:0,27,2327	./.	0/0:20,0:19:27.09:0,27,2125	0/0:16,0:11:33.11:0,33,3019	0/0:22,0:19:39.13:0,39,3064	0/0:21,0:15:21.07:0,21,1756	0/0:13,0:12:21.07:0,21,1966	0/0:17,0:14:33.11:0,33,3081	0/0:37,0:27:35.51:0,36,2791	1/1:0,1:1:3.01:151,3,0	0/0:38,0:25:30.10:0,30,1809	0/0:28,0:19:33.10:0,33,2305	./.	1/1:0,4:3:9.03:451,9,0	0/0:28,0:21:39.13:0,39,3284	1/1:0,1:1:3.01:151,3,0	0/0:8,0:8:18.06:0,18,1314	0/0:19,0:16:15.05:0,15,793	0/0:43,0:34:54.19:0,54,4767	0/0:26,0:13:39.11:0,39,2641	0/0:16,0:10:24.08:0,24,1265	0/0:6,0:3:6.02:0,6,424
chr10	5450112	.	CT	C	149.02	PASS	AC=2;AF=0.50;AN=4;DP=235;FS=0.000;HRun=9;HaplotypeScore=10.8639;MQ=17.29;MQ0=94;QD=12.42;VQSLOD=0.4604;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	0/0:12,0:2:0.47:0,0,1	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	1/1:1,11:11:23.38:213,23,0	./.	./.	./.
chr10	5455789	.	G	GTC	253.34	PASS	AC=6;AF=0.115;AN=52;BaseQRankSum=4.828;DP=510;FS=10.922;HRun=0;HaplotypeScore=68.7913;InbreedingCoeff=0.8653;MQ=55.65;MQ0=3;MQRankSum=-3.731;QD=23.03;ReadPosRankSum=-1.051;VQSLOD=2.8455;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/0:9,0:9:27.09:0,27,366	0/0:20,0:15:42.14:0,42,575	0/0:23,1:16:39.13:0,39,535	0/0:26,0:26:63.21:0,63,847	0/0:19,0:18:45.15:0,45,617	0/0:27,0:27:75.19:0,75,1008	0/0:18,0:18:51.17:0,51,700	0/0:30,0:30:87.29:0,87,1194	0/0:27,0:27:81.24:0,81,1082	0/0:24,0:24:66.22:0,66,904	0/0:28,0:28:69.23:0,69,946	0/0:18,0:18:48.16:0,48,657	0/0:31,0:31:81.27:0,81,1111	0/0:13,0:13:33.11:0,33,453	./.	0/0:11,0:11:30.10:0,30,412	0/0:31,1:32:36.91:0,37,1044	1/1:3,1:4:6.02:106,6,0	1/1:0,2:1:3.01:53,3,0	0/0:40,0:40:99:0,108,1425	1/1:0,5:5:12.04:212,12,0	0/0:20,0:20:48.16:0,48,658	0/0:38,0:38:99:0,114,1531	0/0:9,0:9:24.08:0,24,329	0/0:11,0:11:30.10:0,30,412	0/0:14,0:13:36.12:0,36,494	0/0:7,0:4:12.04:0,12,165
chr10	5456031	.	G	GC	3941.55	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=13.301;DP=636;FS=7.389;HRun=2;HaplotypeScore=80.6658;InbreedingCoeff=0.9944;MQ=70.70;MQ0=0;MQRankSum=-4.369;QD=36.16;ReadPosRankSum=-0.965;VQSLOD=3.5106;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,42:41:99:1653,120,0	0/0:7,0:7:21.07:0,21,260	0/0:23,0:23:69.18:0,69,803	0/0:21,0:21:51.16:0,51,627	0/0:25,0:25:75.24:0,75,927	0/0:18,0:18:48.15:0,48,595	0/0:24,0:24:69.22:0,69,855	0/0:31,0:31:87.27:0,87,1067	0/0:22,0:22:63.20:0,63,781	0/0:26,0:26:78.22:0,78,929	0/0:19,0:19:54.17:0,54,665	0/0:31,0:31:90.28:0,90,1116	0/0:28,0:28:81.24:0,81,992	0/0:19,0:19:54.16:0,54,659	0/0:22,0:22:63.19:0,63,769	1/1:1,19:19:48.16:667,48,0	0/0:19,0:19:57.18:0,57,707	0/0:25,0:25:75.24:0,75,929	1/1:0,21:21:56.81:756,57,0	1/1:2,9:11:21.07:299,21,0	0/0:43,0:43:99:0,126,1525	1/1:0,15:14:42.14:567,42,0	0/0:21,0:21:63.20:0,63,781	0/0:18,0:18:51.16:0,51,632	0/0:20,0:20:60.19:0,60,743	0/0:30,0:30:90.28:0,90,1116	0/0:30,0:30:87.23:0,87,1039	0/0:5,0:5:15.02:0,15,160
chr10	5456309	.	CTTGA	C	3791.97	PASS	AB=0.667;AC=11;AF=0.196;AN=56;BaseQRankSum=14.869;DP=731;FS=0.855;HRun=0;HaplotypeScore=137.5706;InbreedingCoeff=0.8850;MQ=76.49;MQ0=4;MQRankSum=-12.166;QD=26.70;ReadPosRankSum=-4.030;VQSLOD=2.6242;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,23:21:54.18:986,54,0	0/0:8,0:8:24.04:0,24,545	0/0:26,0:26:62.38:0,62,1718	0/0:23,0:23:63.13:0,63,1597	0/0:27,0:27:81.28:0,81,2347	0/0:26,0:26:78.25:0,78,2152	0/0:30,0:30:87.29:0,87,2413	0/1:29,0:56:99:301,0,1866	0/0:20,0:20:60.21:0,60,1688	0/0:18,0:18:54.19:0,54,1494	0/0:21,0:21:60.19:0,60,1677	0/0:22,0:22:66.21:0,66,1715	0/0:35,0:35:99:0,105,2823	0/0:35,0:35:99:0,105,2918	0/0:38,0:38:99:0,114,3169	1/1:0,8:7:21.07:433,21,0	0/0:26,0:26:78.27:0,78,2241	0/0:20,0:20:54.18:0,54,1514	1/1:0,18:14:36.12:689,36,0	1/1:0,15:12:24.08:474,24,0	0/0:72,0:72:99:0,217,5949	1/1:0,20:19:48.16:909,48,0	0/0:15,0:15:45.15:0,45,1295	0/0:33,0:33:93.29:0,93,2479	0/0:24,0:24:72.25:0,72,1987	0/0:34,0:34:99:0,99,2848	0/0:25,0:25:75.26:0,75,2127	0/0:11,0:11:33.10:0,33,880
chr10	5456963	.	G	GT	2370.01	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-1.720;DP=435;FS=0.556;HRun=0;HaplotypeScore=41.6569;InbreedingCoeff=0.9427;MQ=70.80;MQ0=0;MQRankSum=-1.214;QD=41.58;ReadPosRankSum=1.618;VQSLOD=3.7934;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,12:12:33.11:527,33,0	0/0:1,0:1:3.01:0,3,42	0/0:10,0:10:24.06:0,24,297	0/0:8,0:8:21.06:0,21,276	0/0:21,0:21:60.18:0,60,821	0/0:31,0:31:93.29:0,93,1280	0/0:10,0:10:30.10:0,30,420	0/0:30,0:30:84.28:0,84,1173	0/0:13,0:13:39.13:0,39,545	0/0:22,0:22:63.21:0,63,881	0/0:16,0:16:48.15:0,48,653	0/0:15,0:15:45.15:0,45,629	0/0:10,0:10:30.09:0,30,403	0/0:18,0:18:54.18:0,54,754	0/0:20,0:20:60.20:0,60,839	1/1:0,9:9:27.09:431,27,0	0/0:14,0:14:42.11:0,42,567	0/0:22,0:22:66.22:0,66,916	1/1:0,11:11:33.11:528,33,0	1/1:3,19:22:57.19:911,57,0	0/0:10,0:10:30.10:0,30,420	1/1:0,3:3:9.03:144,9,0	0/0:6,0:6:18.06:0,18,251	0/0:9,0:9:27.09:0,27,378	0/0:17,0:17:48.16:0,48,671	0/0:26,0:26:78.26:0,78,1089	0/0:26,0:25:78.25:0,78,1074	0/0:23,0:23:69.23:0,69,964
chr10	5458054	.	A	ACCT	178.54	PASS	AB=0.879;AC=5;AF=0.096;AN=52;BaseQRankSum=-0.739;DP=681;FS=10.105;HRun=0;HaplotypeScore=65.9089;InbreedingCoeff=0.0736;MQ=45.10;MQ0=49;MQRankSum=-2.255;QD=1.61;ReadPosRankSum=1.289;VQSLOD=0.5493;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,4:16:3.01:0,3,45	0/0:7,0:6:12.04:0,12,177	0/0:24,0:13:15.03:0,15,201	0/0:29,0:12:24.08:0,24,349	0/0:18,0:16:23.91:0,24,356	0/0:20,2:19:9.03:0,9,134	0/0:27,1:9:3.01:0,3,44	./.	0/0:16,0:15:9.03:0,9,133	0/0:29,0:25:60.20:0,60,884	0/0:19,0:19:20.99:0,21,312	0/0:31,0:24:18.53:0,19,266	0/0:19,1:17:5.96:0,6,69	0/0:36,2:34:21.03:0,21,252	0/0:29,0:21:12.04:0,12,177	1/1:21,1:10:3.01:63,3,0	./.	0/0:37,0:27:27.09:0,27,397	0/1:18,1:6:35.45:102,0,35	0/0:11,0:11:3.01:0,3,45	0/1:34,8:36:72.36:72,0,77	0/0:13,0:9:6.02:0,6,89	0/0:18,0:17:39.10:0,39,566	0/1:23,5:26:50.33:50,0,121	0/0:28,0:28:26.83:0,27,400	0/0:31,0:24:51.16:0,51,743	0/0:27,3:22:17.82:0,18,267	0/0:12,0:7:3.01:0,3,44
chr10	5458306	.	G	GT	1113.10	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=-6.010;DP=477;FS=0.619;HRun=9;HaplotypeScore=59.5754;InbreedingCoeff=0.8057;MQ=65.89;MQ0=0;MQRankSum=-1.214;QD=20.24;ReadPosRankSum=0.466;VQSLOD=4.0398;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:86.87:0,87,732	0/0:11,0:11:21.47:0,21,183	0/0:17,0:14:24.42:0,24,207	0/0:10,0:9:14.98:0,15,127	0/0:17,0:17:32.97:0,33,282	0/0:20,0:20:24.04:0,24,193	0/0:15,0:15:38.97:0,39,334	0/0:26,0:26:59.93:0,60,511	0/0:11,0:11:29.99:0,30,260	0/0:23,0:23:62.97:0,63,545	0/0:23,0:23:44.89:0,45,387	0/0:12,0:12:35.99:0,36,312	0/0:19,0:19:41.98:0,42,364	0/1:6,0:6:6.36:6,0,112	0/0:18,0:18:47.99:0,48,416	0/0:15,0:15:41.89:0,42,346	0/0:27,1:28:32.75:0,33,508	0/0:31,0:31:80.90:0,81,691	0/0:17,0:17:44.98:0,45,387	0/0:21,0:21:53.83:0,54,449	0/0:11,0:11:26.99:0,27,234	0/0:8,0:8:14.95:0,15,123	0/0:15,0:15:35.87:0,36,306	0/0:6,0:6:11.96:0,12,98	0/0:18,0:18:35.99:0,36,312	1/1:3,16:19:48.13:531,48,0	1/1:3,23:26:60.10:648,60,0	1/1:0,4:4:6.02:66,6,0
chr10	5458763	.	GTGT	G	4313.62	PASS	AB=0.603;AC=13;AF=0.232;AN=56;BaseQRankSum=7.398;DP=715;FS=2.315;HRun=0;HaplotypeScore=122.8994;InbreedingCoeff=0.8944;MQ=72.68;MQ0=6;MQRankSum=1.795;QD=24.51;ReadPosRankSum=-0.437;VQSLOD=4.6207;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:23.81:0,24,283	0/0:16,0:16:48.15:0,48,885	0/0:38,0:27:25.90:0,26,397	0/0:25,0:21:30.06:0,30,405	0/0:22,0:22:54.16:0,54,1024	0/0:24,0:24:31.07:0,31,1088	0/0:21,0:21:48.15:0,48,911	1/1:20,23:43:66.17:859,66,0	0/0:26,0:26:54.18:0,54,1011	0/0:31,0:31:66.21:0,66,1203	0/0:28,0:28:69.23:0,69,1285	0/0:20,0:20:57.18:0,57,1076	0/0:17,0:17:39.12:0,39,755	0/0:27,0:27:69.22:0,69,1297	1/1:3,18:21:42.14:601,42,0	0/0:17,0:17:15.55:0,16,38	1/1:3,16:19:36.12:514,36,0	0/0:38,0:38:84.28:0,84,1526	0/0:22,0:21:21.53:0,22,101	0/0:24,0:24:30.94:0,31,87	0/0:32,0:32:69.23:0,69,1227	0/0:30,0:30:43.07:0,43,142	0/0:30,0:30:63.22:0,63,1209	0/0:25,0:25:69.22:0,69,1325	1/1:2,13:15:24.08:344,24,0	0/1:13,25:38:40.74:946,0,41	1/1:6,23:29:54.18:772,54,0	1/1:0,11:11:21.03:277,21,0
chr10	5458783	.	GTT	G	2913.54	PASS	AB=0.989;AC=11;AF=0.196;AN=56;BaseQRankSum=12.291;DP=676;FS=2.079;HRun=4;HaplotypeScore=108.1023;InbreedingCoeff=0.6640;MQ=62.07;MQ0=7;MQRankSum=0.092;QD=19.69;ReadPosRankSum=2.677;VQSLOD=0.8726;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:27,1:28:36.34:36,0,59	0/0:18,0:18:48.16:0,48,841	0/0:37,0:22:55.31:0,55,721	0/0:25,0:20:54.12:0,54,696	0/0:24,0:24:72.25:0,72,1261	0/0:23,0:23:68.80:0,69,1116	0/0:17,0:19:44.85:0,45,915	0/0:31,0:31:27.14:0,27,339	0/0:22,0:22:66.22:0,66,1107	0/0:30,0:30:87.29:0,87,1412	0/0:27,0:27:81.26:0,81,1367	0/0:21,0:21:63.21:0,63,1087	0/0:15,0:15:45.15:0,45,813	0/0:26,0:26:78.27:0,78,1336	0/0:25,0:25:13.74:0,14,264	1/1:0,18:18:30.10:442,30,0	0/1:20,0:20:2.32:2,0,55	0/0:36,0:36:99:0,99,1623	1/1:6,11:15:14.21:446,14,0	1/1:1,21:22:63.09:873,63,0	0/0:27,0:27:81.24:0,81,1288	1/1:1,31:32:51.24:1274,51,0	0/0:25,0:25:75.24:0,75,1259	0/0:26,0:26:72.25:0,72,1290	0/0:15,0:15:4.88:0,5,117	0/0:29,0:29:7.40:0,7,214	0/0:27,0:27:2.92:0,3,150	0/1:11,0:11:0.15:0,0,16
chr10	5458785	.	T	TGTTGTTG	1123.75	PASS	AB=1.000;AC=4;AF=0.071;AN=56;BaseQRankSum=1.746;DP=690;FS=4.193;HRun=0;HaplotypeScore=185.0259;InbreedingCoeff=0.4384;MQ=62.00;MQ0=7;MQRankSum=-2.341;QD=13.54;ReadPosRankSum=-1.557;VQSLOD=2.8176;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:2,23:30:30.10:1138,30,0	0/0:17,0:17:48.16:0,48,1208	0/0:36,0:23:59.18:0,59,844	0/0:26,0:21:59.68:0,60,847	0/0:26,0:26:72.25:0,72,1670	0/0:24,0:24:72.22:0,72,1652	0/0:21,0:21:44.39:0,44,1336	0/0:33,0:33:78.38:0,78,1171	0/0:22,0:22:66.22:0,66,1609	0/0:30,0:30:87.29:0,87,1916	0/0:28,0:28:84.26:0,84,1943	0/0:21,0:21:63.21:0,63,1496	0/0:16,0:16:48.15:0,48,1153	0/0:28,0:28:78.27:0,78,1925	0/0:26,0:26:63.21:0,63,1142	0/0:18,0:18:11.47:0,11,282	0/0:20,0:20:42.13:0,42,772	0/0:36,0:36:98.48:0,98,2251	0/0:16,0:14:8.90:0,9,303	0/1:21,0:21:15.66:16,0,618	0/0:27,0:27:81.24:0,81,1744	0/1:32,0:32:84.69:85,0,789	0/0:25,0:25:75.24:0,75,1781	0/0:26,0:26:72.25:0,72,1836	0/0:15,0:15:33.11:0,33,620	0/0:30,0:30:84.26:0,84,1625	0/0:28,0:28:66.23:0,66,1253	0/0:11,0:11:21.07:0,21,412
chr10	5459821	.	C	CT	703.89	PASS	AB=0.991;AC=5;AF=0.089;AN=56;BaseQRankSum=-4.020;DP=500;FS=0.000;HRun=10;HaplotypeScore=74.0889;InbreedingCoeff=0.5599;MQ=65.06;MQ0=6;MQRankSum=1.735;QD=6.70;ReadPosRankSum=-5.445;VQSLOD=0.6043;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:18,0:18:0.01:0,0,0	0/0:11,0:11:26.94:0,27,222	0/0:25,0:12:12.40:0,12,104	0/1:33,0:18:8.90:9,0,155	0/0:27,0:26:56.89:0,57,465	0/0:22,0:22:50.91:0,51,418	0/0:10,0:10:20.95:0,21,172	1/1:19,18:37:78.11:795,78,0	0/0:11,0:12:22.98:0,23,178	0/0:21,0:21:38.89:0,39,320	0/0:15,0:15:35.95:0,36,296	0/0:17,0:17:44.94:0,45,369	0/0:15,0:15:32.92:0,33,270	0/0:14,0:14:32.96:0,33,271	0/0:10,0:10:23.95:0,24,197	0/0:15,0:15:1.79:0,2,5	0/0:27,0:27:47.74:0,48,392	0/0:19,0:21:26.31:0,26,308	0/0:14,0:14:1.25:0,1,4	0/1:15,0:15:0:0,0,0	0/0:8,0:8:14.98:0,15,123	0/0:12,0:12:1.36:0,1,4	0/0:18,0:17:38.94:0,39,320	0/0:17,0:17:47.93:0,48,392	0/0:21,0:21:41.94:0,42,344	0/0:17,0:17:34.74:0,35,273	0/0:17,0:18:19.80:0,20,215	0/0:8,0:8:20.98:0,21,172
chr10	5459826	.	TTTTTTCTTTTCTTTTTTTTTTCCTTTATTTTATTTATTTA	T	1538.68	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=3.568;DP=529;FS=0.000;HRun=0;HaplotypeScore=411.0622;InbreedingCoeff=0.8808;MQ=62.00;MQ0=7;MQRankSum=-3.598;QD=18.32;ReadPosRankSum=-0.462;VQSLOD=0.8797;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,21:23:9.03:803,9,0	0/0:13,0:12:33.08:0,33,4023	0/0:34,0:16:41.01:0,41,1417	0/0:42,0:19:53.76:0,54,2108	0/0:27,0:26:60.11:0,60,5983	0/0:21,0:21:51.10:0,51,6589	0/0:11,0:11:27.06:0,27,2638	0/0:34,0:34:19.18:0,19,4764	0/0:13,0:13:30.05:0,30,3253	0/0:23,0:23:63.19:0,63,6177	0/0:17,0:17:45.14:0,45,4945	0/0:16,0:16:45.11:0,45,6110	0/0:15,0:15:39.12:0,39,3971	0/0:12,0:12:33.11:0,33,4477	0/0:11,0:11:33.11:0,33,3613	1/1:19,0:18:3.01:267,3,0	0/0:31,0:31:69.21:0,69,9382	0/0:22,0:22:60.16:0,60,6771	1/1:13,0:13:9.54:277,10,0	1/1:13,0:13:8.90:60,9,0	0/0:7,0:7:15.01:0,15,1319	1/1:16,0:16:5.81:279,6,0	0/0:17,0:16:39.10:0,39,4463	0/0:17,0:17:51.17:0,51,7008	0/0:19,0:19:43.36:0,43,3788	0/0:17,0:17:39.54:0,40,3999	0/0:15,0:15:39.10:0,39,4635	0/0:10,0:10:30.10:0,30,2944
chr10	5459827	.	TTTTTCTTTTCTTTTTTTTTTCCTTTATTTTATTTATTTA	T	1649.36	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=3.335;DP=527;FS=0.000;HRun=0;HaplotypeScore=394.3477;InbreedingCoeff=0.8946;MQ=61.72;MQ0=9;MQRankSum=-5.064;QD=20.36;ReadPosRankSum=-0.785;VQSLOD=0.9128;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:23:9.03:742,9,0	0/0:13,0:12:33.07:0,33,3930	0/0:40,0:16:40.22:0,40,1336	0/0:43,0:19:53.35:0,53,2009	0/0:26,0:25:60.09:0,60,5791	0/0:21,0:21:51.08:0,51,6437	0/0:11,0:11:27.05:0,27,2571	0/0:34,0:34:22.12:0,22,4545	0/0:12,0:12:29.98:0,30,3157	0/0:22,0:22:63.19:0,63,5957	0/0:18,0:18:48.12:0,48,5236	0/0:16,0:16:45.10:0,45,5942	0/0:15,0:15:39.12:0,39,3857	0/0:12,0:12:33.11:0,33,4377	0/0:11,0:11:33.10:0,33,3526	1/1:3,15:17:3.01:295,3,0	0/0:30,0:30:69.22:0,69,9133	0/0:21,0:21:60.16:0,60,6574	1/1:11,0:11:20.90:396,21,0	1/1:13,0:13:8.90:60,9,0	0/0:6,0:6:15:0,15,1264	1/1:0,16:16:5.85:309,6,0	0/0:16,0:15:39.10:0,39,4324	0/0:17,0:17:51.16:0,51,6808	0/0:19,0:19:43.33:0,43,3645	0/0:17,0:17:39.52:0,40,3927	0/0:15,0:15:39.09:0,39,4465	0/0:11,0:11:33.11:0,33,3253
chr10	5459866	.	A	AT	1794.93	PASS	AB=0.872;AC=17;AF=0.304;AN=56;BaseQRankSum=5.209;DP=447;FS=0.502;HRun=8;HaplotypeScore=64.9876;InbreedingCoeff=0.7274;MQ=63.66;MQ0=8;MQRankSum=2.581;QD=10.50;ReadPosRankSum=-1.445;VQSLOD=1.8547;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:22:9.03:101,9,0	0/0:10,0:8:8.98:0,9,78	0/0:26,0:14:4.78:0,5,49	0/0:35,0:15:6.13:0,6,67	0/0:18,0:18:41.05:0,41,362	0/0:13,0:13:30.01:0,30,275	0/0:8,0:8:21.01:0,21,192	1/1:22,0:22:44.07:278,44,0	0/0:9,0:9:24.01:0,24,220	0/0:18,0:17:35.99:0,36,324	0/0:20,0:20:51.02:0,51,467	0/0:16,0:16:48.01:0,48,434	0/0:13,0:13:30:0,30,269	0/0:12,0:12:23.97:0,24,210	1/1:16,0:16:21.32:122,21,0	0/1:16,0:15:1.53:16,0,2	1/1:31,0:31:65.39:462,65,0	0/0:20,0:20:47.98:0,48,431	0/1:10,0:9:0.88:18,0,1	0/0:8,0:8:1.11:0,1,3	0/0:6,0:6:15:0,15,137	0/0:16,0:16:1.55:0,2,5	0/0:11,0:11:27.01:0,27,247	0/0:13,0:13:32.99:0,33,298	1/1:16,0:16:31.86:220,32,0	1/1:4,7:11:21.05:231,21,0	1/1:4,15:18:36.11:416,36,0	0/1:3,5:7:12.42:123,0,12
chr10	5459869	.	T	TA	2506.93	PASS	AB=1.000;AC=12;AF=0.214;AN=56;BaseQRankSum=-0.319;DP=439;FS=0.961;HRun=0;HaplotypeScore=62.5100;InbreedingCoeff=0.5379;MQ=63.02;MQ0=7;MQRankSum=1.334;QD=16.71;ReadPosRankSum=1.288;VQSLOD=5.2914;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:23:8.39:30,0,8	0/0:8,0:6:15.03:0,15,179	0/0:21,0:12:20.77:0,21,200	0/0:31,0:14:22.46:0,22,200	0/0:17,0:17:48.06:0,48,614	0/0:13,0:13:36.08:0,36,467	0/0:10,0:10:27.02:0,27,335	1/1:2,21:23:55.64:718,56,0	0/0:10,0:10:30.08:0,30,387	0/0:19,0:17:48.14:0,48,614	0/0:20,0:20:54.17:0,54,736	0/0:17,0:17:48.16:0,48,670	0/0:10,0:10:30.10:0,30,418	0/0:12,0:12:36.08:0,36,437	1/1:11,4:15:19.11:379,19,0	0/0:16,0:15:5.71:0,6,32	1/1:1,31:32:66.22:950,66,0	0/0:19,0:19:57.12:0,57,737	0/0:10,0:9:17.11:0,17,126	0/0:8,0:8:8.91:0,9,61	0/0:6,0:6:18.05:0,18,235	0/0:17,0:17:2.74:0,3,12	0/0:11,0:11:30.09:0,30,403	0/0:13,0:13:39.11:0,39,513	1/1:1,13:15:36.09:502,36,0	0/1:13,0:13:13.97:14,0,108	0/1:21,0:20:62.94:63,0,77	0/1:8,0:7:23.15:23,0,51
chr10	5459872	.	TTTC	T	284.03	PASS	AB=0.913;AC=4;AF=0.071;AN=56;BaseQRankSum=1.715;DP=431;FS=3.487;HRun=0;HaplotypeScore=81.6888;InbreedingCoeff=-0.0754;MQ=61.98;MQ0=5;MQRankSum=-1.929;QD=3.84;ReadPosRankSum=-1.767;VQSLOD=1.3574;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:17.77:0,18,161	0/0:10,0:8:20.99:0,21,335	0/0:15,0:9:11.68:0,12,174	0/1:25,0:12:8.17:8,0,231	0/0:19,0:18:51.06:0,51,1003	0/0:13,0:13:36.05:0,36,754	0/0:12,0:12:35.96:0,36,637	0/1:21,0:21:59.86:60,0,359	0/0:11,0:11:33.04:0,33,688	0/0:18,0:16:48.12:0,48,1000	0/0:20,0:20:57.14:0,57,1264	0/0:17,0:17:51.16:0,51,1166	0/0:10,0:10:30.10:0,30,701	0/0:12,0:12:36.10:0,36,699	0/1:6,7:13:26.86:250,0,27	0/0:17,0:16:3.75:0,4,36	0/0:30,0:30:69.02:0,69,1112	0/0:21,0:21:63.09:0,63,1260	0/0:11,0:10:15.24:0,15,201	0/0:9,0:9:11.82:0,12,107	0/0:6,0:6:18.06:0,18,407	0/0:17,0:17:1.56:0,2,12	0/0:11,0:11:30.02:0,30,663	0/0:13,0:13:39.10:0,39,853	0/1:15,0:15:24.16:71,0,24	0/0:12,0:12:35.79:0,36,431	0/0:22,0:21:53.92:0,54,723	0/0:7,0:6:15.04:0,15,248
chr10	5460122	.	TTTG	T	33.63	PASS	AB=0.931;AC=5;AF=0.104;AN=48;BaseQRankSum=4.834;DP=360;FS=7.747;HRun=0;HaplotypeScore=70.3575;InbreedingCoeff=0.2223;MQ=66.15;MQ0=5;MQRankSum=-2.160;QD=0.50;ReadPosRankSum=-1.048;VQSLOD=0.5987;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:7,0:6:17.55:0,18,355	0/0:27,0:12:23.97:0,24,273	0/1:32,0:13:4.85:5,0,290	0/0:16,0:15:39.12:0,39,778	0/0:10,0:10:24.07:0,24,408	0/0:25,0:25:66.21:0,66,1306	0/0:34,0:34:99:0,99,1709	0/0:8,0:8:18.06:0,18,361	0/0:8,0:8:24.08:0,24,519	0/0:8,0:8:24.08:0,24,486	0/0:9,0:9:23.93:0,24,456	0/0:9,0:9:27.04:0,27,502	0/0:7,0:7:21.07:0,21,451	0/0:9,0:9:24.08:0,24,487	1/1:3,0:3:2.98:22,3,0	0/0:30,0:30:47.18:0,47,739	0/0:20,0:20:57.08:0,57,1047	./.	./.	0/0:8,0:7:21.06:0,21,367	./.	0/0:16,0:16:42.48:0,42,714	0/0:15,0:15:43.96:0,44,884	0/0:16,0:16:42.14:0,42,816	0/1:10,1:11:39.09:39,0,78	0/1:18,3:20:71.50:71,0,280	0/0:10,0:10:23.46:0,23,173
chr10	5460151	.	TTTTTG	T	565.77	PASS	AB=0.889;AC=4;AF=0.083;AN=48;BaseQRankSum=2.299;DP=435;FS=13.622;HRun=0;HaplotypeScore=80.9056;InbreedingCoeff=-0.0911;MQ=48.45;MQ0=52;MQRankSum=-2.683;QD=4.79;ReadPosRankSum=1.650;VQSLOD=0.5994;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:4:6.02:0,6,73	0/0:8,0:7:20.99:0,21,363	0/0:65,0:6:12.30:0,12,129	0/1:55,0:8:3.40:3,0,94	0/0:15,0:13:6.37:0,6,394	0/0:9,0:7:15.01:0,15,215	0/0:26,0:24:59.95:0,60,965	0/1:4,16:19:44.01:388,0,44	0/0:6,0:6:18.06:0,18,443	0/0:8,0:8:20.28:0,20,413	0/0:10,0:10:23.18:0,23,268	0/0:6,0:6:15.03:0,15,260	0/0:11,0:11:10.92:0,11,463	0/0:9,0:8:21.07:0,21,451	0/1:11,0:10:1.85:2,0,203	./.	0/1:31,0:30:99:263,0,126	0/0:17,0:16:41.43:0,41,658	./.	./.	0/0:8,0:6:10.50:0,11,178	./.	0/0:17,0:16:33.24:0,33,600	0/0:28,0:26:66.03:0,66,1152	0/0:18,0:17:19.48:0,19,516	0/0:16,0:14:33.18:0,33,334	0/0:18,0:17:38.58:0,39,593	0/0:15,0:14:33.01:0,33,559
chr10	5460858	.	A	AG	3080.88	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=12.569;DP=730;FS=4.223;HRun=0;HaplotypeScore=76.0254;InbreedingCoeff=0.9969;MQ=62.50;MQ0=0;MQRankSum=-11.876;QD=26.56;ReadPosRankSum=0.870;VQSLOD=4.2803;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,30:29:48.16:764,48,0	0/0:14,0:14:42.13:0,42,572	0/0:8,0:8:21.06:0,21,277	0/0:11,0:9:21.06:0,21,267	0/0:34,0:34:96.32:0,96,1341	0/0:35,0:35:99:0,99,1350	0/0:33,0:33:99:0,99,1352	0/0:30,0:30:90.27:0,90,1200	0/0:27,0:27:81.26:0,81,1114	0/0:30,0:30:90.30:0,90,1259	0/0:23,0:23:66.22:0,66,923	0/0:29,0:29:87.28:0,87,1199	0/0:32,0:32:96.31:0,96,1325	0/0:26,0:26:78.26:0,78,1091	0/0:28,0:27:84.28:0,84,1175	1/1:0,24:24:54.18:850,54,0	0/0:44,1:45:87.51:0,88,1778	0/0:26,0:26:78.26:0,78,1088	1/1:1,10:10:21.07:326,21,0	1/1:0,30:30:57.19:885,57,0	0/0:30,0:30:87.29:0,87,1217	1/1:1,20:20:27.09:430,27,0	0/0:31,0:31:93.31:0,93,1288	0/0:29,0:29:81.27:0,81,1133	0/0:27,0:27:78.22:0,78,1053	0/0:23,0:23:69.23:0,69,965	0/0:24,0:24:72.23:0,72,985	0/0:19,0:19:57.19:0,57,796
chr10	5461231	.	TA	T	1270.56	PASS	AB=0.761;AC=16;AF=0.296;AN=54;BaseQRankSum=11.217;DP=542;FS=3.484;HRun=12;HaplotypeScore=85.3316;InbreedingCoeff=0.8111;MQ=60.99;MQ0=1;MQRankSum=-4.200;QD=6.65;ReadPosRankSum=2.352;VQSLOD=2.6550;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:10,0:28:34.74:101,35,0	0/0:11,0:11:30.06:0,30,305	./.	0/0:7,0:5:2.27:0,2,55	0/0:39,1:40:20.53:0,21,611	0/0:22,1:23:39.84:0,40,573	0/0:18,1:19:30.46:0,30,474	0/0:14,0:25:48.70:0,49,278	0/0:16,0:16:45.07:0,45,445	0/0:22,0:24:50.75:0,51,476	0/1:24,3:28:4.07:4,0,465	0/0:16,0:16:42.07:0,42,421	0/0:15,0:15:36.07:0,36,366	0/0:14,0:14:36:0,36,337	0/0:1,0:18:45.45:0,45,228	1/1:3,0:14:22.40:65,22,0	0/0:19,0:19:48.08:0,48,476	0/0:24,0:24:60.09:0,60,595	1/1:6,0:15:20.91:63,21,0	1/1:3,0:17:25.15:77,25,0	0/0:10,0:10:24.05:0,24,244	1/1:2,0:14:24.34:79,24,0	0/0:25,0:27:56.33:0,56,496	0/0:15,1:16:21.86:0,22,403	0/0:7,0:23:51.53:0,52,282	0/1:10,16:26:32.62:287,0,33	1/1:4,27:31:68.71:534,69,0	1/1:2,15:17:32.87:255,33,0
chr10	5461879	.	C	CT	936.37	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=5.540;DP=338;FS=0.000;HRun=5;HaplotypeScore=63.5383;InbreedingCoeff=0.8828;MQ=77.51;MQ0=2;MQRankSum=0.133;QD=21.78;ReadPosRankSum=-1.710;VQSLOD=2.4394;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:37.75:0,38,198	0/0:4,0:4:9.02:0,9,96	0/0:13,0:9:17.98:0,18,177	0/0:12,1:12:12.10:0,12,126	0/0:22,0:22:60.13:0,60,636	0/0:14,0:14:39.08:0,39,411	0/0:5,0:5:15.04:0,15,161	0/0:31,0:31:72.17:0,72,773	0/0:7,0:7:18.05:0,18,193	0/0:12,0:12:36.08:0,36,381	0/0:9,0:9:24.04:0,24,249	0/0:9,0:9:24.06:0,24,258	0/0:7,0:7:18.04:0,18,193	0/0:8,0:8:18.04:0,18,193	0/0:11,0:11:28.67:0,29,150	1/1:2,9:11:27.08:328,27,0	0/0:12,0:12:27.26:0,27,137	0/0:21,0:21:54.13:0,54,580	1/1:7,10:18:28.83:416,29,0	1/1:3,7:10:21.93:245,22,0	0/0:4,0:4:12.03:0,12,129	1/1:2,2:4:9.02:102,9,0	0/0:2,0:2:6.02:0,6,64	0/0:2,0:2:6.02:0,6,64	0/0:18,0:18:39.38:0,39,200	0/0:19,0:19:54.08:0,54,568	0/0:13,0:13:36.09:0,36,387	0/0:18,0:18:35.74:0,36,387
chr10	5461885	.	C	CT	1324.80	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=5.509;DP=324;FS=0.000;HRun=5;HaplotypeScore=57.1400;InbreedingCoeff=0.8800;MQ=73.09;MQ0=2;MQRankSum=1.182;QD=22.84;ReadPosRankSum=-1.024;VQSLOD=2.3003;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:37.09:0,37,196	0/0:4,0:4:12.03:0,12,129	0/0:15,0:9:16.82:0,17,154	0/0:11,0:9:10.04:0,10,75	0/0:21,0:21:63.14:0,63,669	0/0:12,0:12:36.09:0,36,387	0/0:5,0:5:12.03:0,12,129	0/0:32,0:32:78.18:0,78,831	0/0:6,0:6:12.03:0,12,129	0/0:12,0:12:33.08:0,33,350	0/0:8,0:8:24.06:0,24,258	0/0:8,0:8:24.05:0,24,250	0/0:7,0:7:18.05:0,18,193	0/0:6,0:6:18.05:0,18,193	0/0:10,0:10:28.67:0,29,150	1/1:11,0:11:27.08:329,27,0	1/1:4,10:14:30.10:394,30,0	0/0:20,0:20:60.11:0,60,631	1/1:20,0:20:22.47:392,22,0	1/1:10,0:10:24.04:267,24,0	0/0:4,0:4:12.03:0,12,129	1/1:3,0:3:9.03:112,9,0	0/0:2,0:2:3.01:0,3,32	0/0:2,0:2:6.02:0,6,64	0/0:17,0:17:36.94:0,37,187	0/0:18,0:18:48.04:0,48,488	0/0:13,0:13:30.07:0,30,322	0/0:13,0:13:35.74:0,36,386
chr10	5461939	.	T	TTA	1817.67	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=6.426;DP=333;FS=1.711;HRun=0;HaplotypeScore=60.9694;InbreedingCoeff=0.8274;MQ=62.86;MQ0=8;MQRankSum=-0.024;QD=16.68;ReadPosRankSum=-0.117;VQSLOD=3.4352;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:45.06:0,45,629	0/0:7,0:6:21.07:0,21,320	0/1:25,0:8:1.52:2,0,83	0/0:41,0:16:20.96:0,21,212	0/0:10,0:10:27.08:0,27,391	0/0:19,0:19:51.16:0,51,756	0/0:3,0:3:9.03:0,9,138	1/1:35,0:35:93.63:628,94,0	0/0:4,0:4:12.04:0,12,179	0/0:13,0:13:36.12:0,36,549	0/0:9,0:9:24.08:0,24,368	0/0:7,0:7:21.06:0,21,297	0/0:3,0:3:9.03:0,9,137	0/0:4,0:4:12.04:0,12,182	0/0:4,0:4:9.03:0,9,133	0/0:8,0:8:21.05:0,21,247	1/1:17,0:17:39.29:178,39,0	0/0:23,0:23:51.74:0,52,894	0/0:14,0:13:35.28:0,35,343	0/0:8,0:8:15:0,15,162	0/0:5,0:4:9.02:0,9,118	1/1:1,0:1:2.22:7,2,0	0/0:4,0:4:12.04:0,12,183	0/0:5,0:5:12.04:0,12,182	0/0:15,0:15:39.11:0,39,570	1/1:3,7:11:26.94:337,27,0	1/1:1,5:6:15.05:281,15,0	1/1:5,9:14:32.96:561,33,0
chr10	5461941	.	TTA	T	1625.38	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=7.751;DP=333;FS=0.000;HRun=0;HaplotypeScore=60.7174;InbreedingCoeff=0.6134;MQ=62.97;MQ0=8;MQRankSum=-1.909;QD=12.60;ReadPosRankSum=-1.134;VQSLOD=2.6574;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:40.53:0,41,342	0/0:7,0:6:21.07:0,21,336	0/1:22,0:7:15.88:16,0,104	0/0:41,0:16:1.15:0,1,194	0/0:12,0:12:33.03:0,33,413	0/0:17,0:17:48.14:0,48,738	0/0:3,0:3:9.03:0,9,144	1/1:34,0:34:88.31:770,88,0	0/0:4,0:4:12.04:0,12,190	0/0:13,0:13:39.12:0,39,587	0/0:10,0:10:30.08:0,30,438	0/0:9,0:9:27.04:0,27,328	0/0:3,0:3:9.02:0,9,122	0/0:5,0:5:15:0,15,148	0/0:4,0:4:8.37:0,8,61	0/0:8,0:8:17.94:0,18,144	1/1:18,0:18:40.83:328,41,0	0/0:22,0:22:58:0,58,901	0/1:13,0:12:53.94:54,0,144	0/1:8,0:8:31.90:32,0,103	0/0:5,0:4:5.99:0,6,73	1/1:2,0:2:6:54,6,0	0/0:4,0:4:12.04:0,12,190	0/0:6,0:6:18.03:0,18,236	0/0:14,0:14:31.63:0,32,192	1/1:9,1:10:23.70:176,24,0	1/1:5,1:6:13.21:78,13,0	1/1:13,3:16:38.81:303,39,0
chr10	5461942	.	TA	T	2297.13	PASS	AB=0.993;AC=18;AF=0.321;AN=56;BaseQRankSum=7.725;DP=333;FS=2.987;HRun=1;HaplotypeScore=52.5879;InbreedingCoeff=0.5206;MQ=63.00;MQ0=8;MQRankSum=-1.864;QD=12.15;ReadPosRankSum=-1.284;VQSLOD=1.6044;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:39.21:0,39,219	0/0:7,0:6:21.07:0,21,264	0/1:20,1:7:11.45:11,0,91	0/1:41,0:16:1:1,0,147	0/0:11,0:11:33.04:0,33,350	0/0:18,0:18:51.12:0,51,614	0/0:3,0:3:9.03:0,9,113	1/1:0,34:34:89.62:1063,90,0	0/0:4,0:4:12.04:0,12,151	0/0:13,0:13:39.11:0,39,471	0/0:10,0:10:30.07:0,30,352	0/0:9,0:9:27.03:0,27,284	0/0:3,0:3:9.02:0,9,100	0/0:5,0:5:15:0,15,137	0/1:4,0:4:0.18:0,0,20	0/0:7,0:7:16.59:0,17,82	1/1:4,14:18:47.41:592,47,0	0/0:23,0:23:65.47:0,65,751	0/1:14,0:13:79.59:80,0,98	0/1:8,0:8:23.98:24,0,51	0/0:5,0:4:5.98:0,6,62	1/1:3,0:3:8.97:73,9,0	0/0:4,0:4:12.04:0,12,151	0/0:6,0:6:18.03:0,18,200	0/1:14,0:14:37:37,0,73	1/1:7,2:9:23.58:160,24,0	1/1:6,0:6:14.91:113,15,0	1/1:16,0:16:41.83:329,42,0
chr10	5461943	.	A	ATTT	1588.58	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=3.420;DP=327;FS=0.000;HRun=9;HaplotypeScore=65.8508;InbreedingCoeff=0.7575;MQ=63.08;MQ0=6;MQRankSum=-1.873;QD=14.18;ReadPosRankSum=-1.374;VQSLOD=-0.0439;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:16:12.46:27,12,0	0/0:7,0:6:20.98:0,21,240	0/0:20,0:6:3.16:0,3,63	0/0:40,0:16:3.21:0,3,133	0/0:11,0:11:27.03:0,27,311	0/0:18,0:18:48.12:0,48,592	0/0:3,0:3:9.03:0,9,114	0/1:34,0:34:8.17:119,0,8	0/0:4,0:4:12.04:0,12,151	0/0:13,0:13:36.11:0,36,452	0/0:10,0:10:30.07:0,30,349	0/0:9,0:9:24.04:0,24,273	0/0:3,0:3:6:0,6,63	0/0:4,0:4:6:0,6,62	0/0:1,0:4:5.83:0,6,35	1/1:1,6:7:15.05:296,15,0	0/0:17,0:18:12.81:0,13,74	0/0:23,0:23:59.92:0,60,696	1/1:4,10:13:33.06:471,33,0	1/1:1,7:8:17.84:256,18,0	0/0:4,0:3:3:0,3,38	1/1:3,0:3:9.01:100,9,0	0/0:4,0:4:12.04:0,12,151	0/0:6,0:6:18.04:0,18,211	0/0:4,0:14:23.39:0,23,139	1/1:9,0:9:20.11:117,20,0	1/1:5,0:5:14.79:96,15,0	1/1:16,0:16:39.83:302,40,0
chr10	5462200	.	C	CA	4303.64	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=15.967;DP=680;FS=23.395;HRun=5;HaplotypeScore=95.5347;InbreedingCoeff=0.9998;MQ=89.84;MQ0=0;MQRankSum=-4.010;QD=33.62;ReadPosRankSum=2.556;VQSLOD=3.0213;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,26:27:75.24:975,75,0	0/0:17,0:17:42.10:0,42,448	0/0:31,0:31:78.16:0,78,810	0/0:28,0:28:68.97:0,69,698	0/0:34,0:34:96.22:0,96,1021	0/0:29,0:29:87.22:0,87,935	0/0:23,0:23:66.13:0,66,691	0/0:37,0:37:99:0,105,1128	0/0:24,0:24:63.15:0,63,672	0/0:28,0:28:84.21:0,84,903	0/0:22,0:22:57.14:0,57,613	0/0:27,0:27:72.14:0,72,761	0/0:29,0:29:75.17:0,75,797	0/0:21,0:21:63.03:0,63,650	1/1:3,16:20:57.13:700,57,0	1/1:0,16:16:45.15:585,45,0	0/0:28,0:28:78.19:0,78,838	0/0:17,0:17:48.12:0,48,516	1/1:5,12:17:28.95:473,29,0	1/1:2,17:19:51.17:662,51,0	0/0:41,0:41:99:0,114,1178	1/1:1,12:13:36.12:463,36,0	0/0:15,0:15:36.09:0,36,386	0/0:31,0:31:84.17:0,84,890	1/1:3,13:16:36.07:445,36,0	0/0:23,0:23:66.17:0,66,709	0/0:30,0:30:87.19:0,87,925	0/0:17,0:17:42.08:0,42,443
chr10	5462294	.	C	CT	8392.27	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=19.080;DP=781;FS=0.000;HRun=0;HaplotypeScore=114.2046;InbreedingCoeff=0.9999;MQ=55.17;MQ0=6;MQRankSum=-3.403;QD=41.96;ReadPosRankSum=-0.702;VQSLOD=4.1429;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,56:56:99:2264,144,0	0/0:12,0:12:36.12:0,36,502	0/0:26,0:14:33.10:0,33,437	0/0:25,0:17:51.15:0,51,682	0/0:30,0:29:90.29:0,90,1236	0/0:23,0:23:69.23:0,69,965	0/0:23,0:23:69.23:0,69,965	0/0:32,0:31:87.27:0,87,1178	0/0:31,0:31:93.30:0,93,1283	0/0:25,0:25:75.24:0,75,1026	0/0:21,0:20:60.19:0,60,819	0/0:23,0:23:63.21:0,63,880	0/0:31,0:31:89.88:0,90,1241	0/0:23,0:23:66.21:0,66,903	1/1:0,31:31:87.23:1346,87,0	1/1:0,19:19:57.19:910,57,0	0/0:52,1:52:99:0,103,2008	0/0:32,0:31:90.29:0,90,1240	1/1:1,25:24:72.23:1128,72,0	1/1:4,19:22:54.18:849,54,0	0/0:46,0:46:99:0,135,1855	1/1:1,22:23:63.21:1005,63,0	0/0:28,0:28:84.28:0,84,1165	0/0:32,0:32:93.27:0,93,1278	1/1:1,19:20:57.19:890,57,0	0/0:22,0:21:60.19:0,60,824	0/0:31,0:30:90.29:0,90,1242	0/0:12,0:12:36.11:0,36,486
chr10	5462748	.	T	TG	4153.07	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=9.884;DP=655;FS=3.501;HRun=2;HaplotypeScore=70.5393;InbreedingCoeff=0.9951;MQ=56.00;MQ0=7;MQRankSum=-12.071;QD=30.54;ReadPosRankSum=-1.243;VQSLOD=2.9235;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:1,34:33:84.07:1125,84,0	0/0:8,0:8:24.07:0,24,287	0/0:19,0:9:24.05:0,24,283	0/0:29,0:19:49.91:0,50,562	0/0:21,0:21:60.17:0,60,729	0/0:22,0:22:57.16:0,57,688	0/0:25,3:28:69.01:0,69,833	0/0:31,1:31:87.25:0,87,1054	0/0:14,0:14:39.11:0,39,470	0/0:26,0:26:75.23:0,75,921	0/0:12,0:12:33.10:0,33,399	0/0:28,0:28:84.23:0,84,1006	0/0:25,0:25:72.21:0,72,880	0/0:29,0:29:84.23:0,84,1003	1/1:1,27:28:75.10:1016,75,0	1/1:2,17:19:48.09:660,48,0	0/0:38,0:38:99:0,111,1347	0/0:33,2:35:93.22:0,93,1107	1/1:4,9:10:19.88:263,20,0	1/1:2,8:9:17.99:222,18,0	0/0:36,0:36:99:0,105,1271	1/1:1,15:16:36.12:505,36,0	0/0:26,0:26:78.17:0,78,922	0/0:35,0:35:99:0,99,1227	1/1:0,15:15:27.02:362,27,0	0/0:27,0:27:75.22:0,75,916	0/0:22,0:22:63.19:0,63,768	0/0:7,0:7:18.06:0,18,223
chr10	5463089	.	AGAGACGGGAT	A	5709.39	PASS	AB=0.591;AC=13;AF=0.232;AN=56;BaseQRankSum=11.214;DP=497;FS=94.136;HRun=0;HaplotypeScore=157.9252;InbreedingCoeff=0.8100;MQ=77.47;MQ0=0;MQRankSum=-11.340;QD=78.21;ReadPosRankSum=0.200;VQSLOD=1.2450;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,22:22:66.18:2092,66,0	0/0:4,0:4:12.04:0,12,648	0/0:19,0:19:51.16:0,51,2474	0/0:24,0:24:50.47:0,50,2875	0/0:13,0:13:39.13:0,39,1687	0/0:19,0:19:51.18:0,51,2553	0/0:27,0:27:75.26:0,75,3813	0/0:12,0:12:36.12:0,36,1802	0/0:20,0:20:60.21:0,60,3107	0/0:25,0:25:72.25:0,72,3885	0/0:6,0:6:18.05:0,18,746	0/0:21,0:21:60.21:0,60,3056	0/0:15,0:15:45.15:0,45,2329	0/0:17,0:17:51.18:0,51,2599	1/1:2,15:17:45.15:1526,45,0	0/1:4,9:13:99:1020,0,123	0/0:37,0:37:99:0,105,5235	0/0:29,0:29:81.28:0,81,4172	1/1:6,5:11:18.06:509,18,0	1/1:1,2:3:9.03:257,9,0	0/0:51,0:50:99:0,148,7381	1/1:1,3:3:6.02:204,6,0	0/0:9,0:9:27.09:0,27,1255	0/0:32,0:32:93.32:0,93,4612	1/1:0,3:2:3.01:102,3,0	0/0:21,0:21:60.21:0,60,3188	0/0:20,0:20:60.21:0,60,3158	0/0:3,0:3:9.03:0,9,484
chr10	5463214	.	GA	G	91.76	PASS	AB=1.000;AC=7;AF=0.135;AN=52;BaseQRankSum=4.738;DP=353;FS=5.187;HRun=2;HaplotypeScore=67.0524;InbreedingCoeff=0.6174;MQ=49.90;MQ0=8;MQRankSum=-4.053;QD=7.06;ReadPosRankSum=-2.434;VQSLOD=-0.0176;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:3:2.50:9,2,0	0/0:3,0:2:6.02:0,6,90	0/0:9,0:1:3.01:0,3,45	0/0:13,0:2:5.99:0,6,67	0/0:8,0:8:23.74:0,24,303	0/0:8,0:7:18.02:0,18,244	0/0:36,0:34:83.90:0,84,1238	0/0:8,0:7:15.05:0,15,216	0/0:17,0:17:48.16:0,48,714	0/0:6,0:5:12.04:0,12,164	0/0:6,0:6:17.89:0,18,238	0/0:18,0:18:51.16:0,51,740	0/0:21,0:21:63.18:0,63,891	0/0:20,0:19:51.17:0,51,762	0/1:3,0:3:1.75:12,0,2	1/1:0,5:5:15.04:171,15,0	0/0:35,0:34:89.61:0,90,722	0/0:22,0:21:60.17:0,60,845	0/0:7,0:5:12.04:0,12,173	./.	0/0:39,0:37:87.22:0,87,1226	./.	0/0:4,0:3:6.02:0,6,90	0/0:32,0:32:84.27:0,84,1235	1/1:1,0:1:2.90:16,3,0	0/0:12,0:11:12.03:0,12,159	0/0:9,0:9:26.95:0,27,259	0/0:5,0:5:11.97:0,12,97
chr10	5463215	.	AAGGAAGGAAGGAAGGAAGGG	A	1374.12	PASS	AB=1.000;AC=13;AF=0.250;AN=52;BaseQRankSum=4.896;DP=359;FS=11.193;HRun=0;HaplotypeScore=181.8228;InbreedingCoeff=0.7169;MQ=49.96;MQ0=6;MQRankSum=-4.388;QD=33.52;ReadPosRankSum=-1.865;VQSLOD=1.4573;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:3,0:3:5.93:52,6,0	0/0:2,0:2:6.02:0,6,319	./.	0/0:14,0:2:1.82:0,2,5	0/0:8,0:8:18.06:0,18,899	0/0:8,0:7:15.05:0,15,693	0/0:36,0:34:62.65:0,63,2681	0/1:8,0:7:6.62:23,0,7	0/0:18,0:18:42.05:0,42,1689	0/0:6,0:5:15.01:0,15,735	0/0:7,0:7:15.04:0,15,577	0/0:19,0:19:48.15:0,48,2480	0/0:21,0:21:60.21:0,60,3165	0/0:19,0:18:45.15:0,45,2275	1/1:3,0:3:5.80:33,6,0	0/0:5,0:5:14.57:0,15,107	0/0:35,0:34:34.36:0,34,742	0/0:22,0:21:45.10:0,45,1841	./.	0/0:4,0:3:5.93:0,6,39	0/0:40,0:38:90.29:0,90,4057	0/0:2,0:2:5.93:0,6,40	0/0:4,0:3:8.96:0,9,292	0/0:32,0:32:72.10:0,72,3001	1/1:1,0:1:2.88:15,3,0	1/1:5,7:11:15.02:290,15,0	1/1:9,0:9:18.06:664,18,0	1/1:5,0:5:12.04:459,12,0
chr10	5463220	.	AG	A	108.27	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=5.106;DP=376;FS=2.836;HRun=2;HaplotypeScore=70.3217;InbreedingCoeff=0.6460;MQ=49.92;MQ0=6;MQRankSum=-4.738;QD=10.83;ReadPosRankSum=-2.757;VQSLOD=0.8730;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:0,3:3:5.96:45,6,0	0/0:2,0:2:6.02:0,6,90	0/0:11,0:1:3.01:0,3,45	0/0:16,0:2:6.02:0,6,86	0/0:9,0:9:26.88:0,27,367	0/0:9,0:8:21.03:0,21,285	0/0:34,0:34:83.87:0,84,1206	0/0:7,0:7:15.03:0,15,181	0/0:20,0:20:60.12:0,60,839	0/0:8,0:7:18.06:0,18,264	0/0:8,0:8:23.93:0,24,307	0/0:21,0:21:60.19:0,60,852	0/0:24,0:24:69.23:0,69,1019	0/0:21,0:20:57.17:0,57,813	1/1:0,5:5:14.21:132,14,0	0/0:6,0:6:4.74:0,5,12	0/0:32,0:31:83.94:0,84,834	0/0:20,0:19:54.15:0,54,777	0/0:7,0:5:12.04:0,12,158	0/0:6,0:4:1.62:0,2,32	0/0:43,0:41:99:0,108,1551	0/0:2,0:2:0.47:0,0,1	0/0:4,0:3:9.03:0,9,132	0/0:31,0:31:90.30:0,90,1341	1/1:0,2:2:5.95:52,6,0	0/0:11,0:10:12.03:0,12,148	0/0:8,0:8:23.96:0,24,218	0/0:6,0:6:11.98:0,12,101
chr10	5463228	.	AG	A	237.38	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=6.155;DP=403;FS=16.876;HRun=2;HaplotypeScore=76.0987;InbreedingCoeff=0.7678;MQ=50.39;MQ0=8;MQRankSum=-5.507;QD=12.49;ReadPosRankSum=-2.487;VQSLOD=0.6438;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:4:8.61:0,9,75	0/0:2,0:2:6.02:0,6,90	0/0:13,0:1:3.01:0,3,45	0/0:18,0:3:8.10:0,8,42	0/0:11,0:11:32.77:0,33,430	0/0:12,0:11:16.87:0,17,359	0/0:33,0:33:79.11:0,79,1133	0/0:10,0:10:27.02:0,27,339	0/0:22,0:22:66.11:0,66,916	0/0:10,0:9:24.08:0,24,334	0/0:11,0:11:32.96:0,33,432	0/0:19,0:20:57.17:0,57,798	0/0:28,0:28:81.27:0,81,1185	0/0:24,0:23:63.20:0,63,912	0/0:6,0:6:8.79:0,9,134	1/1:0,6:6:18.05:213,18,0	0/0:29,0:28:83.37:0,83,757	0/0:18,0:17:48.16:0,48,715	1/1:4,0:3:3.72:16,4,0	1/1:1,5:4:10.65:78,11,0	0/0:44,0:43:99:0,116,1641	1/1:0,3:3:8.92:70,9,0	0/0:5,0:4:12.04:0,12,174	0/0:36,0:36:99:0,105,1484	0/0:3,0:3:9.02:0,9,103	0/0:9,0:8:11.98:0,12,120	0/0:9,0:9:24:0,24,223	0/0:7,0:6:14.60:0,15,122
chr10	5463322	.	AG	A	2102.34	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=12.509;DP=562;FS=43.722;HRun=2;HaplotypeScore=90.9234;InbreedingCoeff=0.9616;MQ=88.23;MQ0=0;MQRankSum=-11.855;QD=30.03;ReadPosRankSum=-2.538;VQSLOD=0.2191;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,24:26:63.20:816,63,0	0/0:10,0:10:30.10:0,30,450	0/0:29,0:29:38.53:0,39,945	0/0:24,0:24:66.21:0,66,949	0/0:12,0:12:36.11:0,36,517	0/0:19,0:19:51.17:0,51,763	0/0:31,0:31:84.20:0,84,1201	0/0:24,0:24:69.22:0,69,1007	0/0:23,0:23:69.18:0,69,987	0/0:22,0:22:66.22:0,66,989	0/0:16,0:16:42.14:0,42,629	0/0:27,0:27:69.23:0,69,1034	0/0:28,0:28:84.26:0,84,1217	0/0:25,0:25:69.22:0,69,1014	1/1:0,4:4:12.04:155,12,0	1/1:0,3:3:9.03:116,9,0	0/0:17,0:17:48.14:0,48,696	0/0:22,0:22:66.22:0,66,988	1/1:1,2:3:6.02:77,6,0	1/1:1,12:13:36.12:466,36,0	0/0:47,0:47:99:0,138,2045	1/1:2,6:8:18.06:233,18,0	0/0:11,0:11:33.11:0,33,495	0/0:35,0:35:99:0,99,1465	1/1:0,13:13:33.11:428,33,0	0/0:32,0:32:91.54:0,92,1391	0/0:31,0:31:93.31:0,93,1386	0/0:7,0:7:21.06:0,21,293
chr10	5463657	.	CTT	C	4247.38	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=15.138;DP=607;FS=14.263;HRun=5;HaplotypeScore=91.5830;InbreedingCoeff=0.9853;MQ=81.70;MQ0=0;MQRankSum=-3.078;QD=37.59;ReadPosRankSum=2.108;VQSLOD=3.5322;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,34:34:90.30:1259,90,0	0/0:13,0:13:39.13:0,39,697	0/0:24,0:24:63.17:0,63,968	0/0:25,0:25:66.20:0,66,1030	0/0:31,0:31:90.31:0,90,1645	0/0:23,0:23:69.24:0,69,1262	0/0:26,0:26:78.26:0,78,1387	0/0:21,0:21:48.16:0,48,853	0/0:18,0:18:54.19:0,54,990	0/0:24,0:24:72.24:0,72,1292	0/0:21,0:21:60.21:0,60,1096	0/0:22,0:22:63.19:0,63,1122	0/0:33,0:33:99:0,99,1751	0/0:16,0:16:42.14:0,42,726	1/1:1,17:18:48.16:672,48,0	1/1:2,21:23:8.19:784,8,0	0/0:32,0:32:96.33:0,96,1755	0/0:17,0:17:51.16:0,51,896	1/1:0,15:14:42.12:568,42,0	1/1:0,6:6:18.06:251,18,0	0/0:28,0:28:81.28:0,81,1483	1/1:0,9:9:27.09:377,27,0	0/0:19,0:19:54.19:0,54,990	0/0:26,0:26:78.26:0,78,1396	1/1:0,8:8:24.08:335,24,0	0/0:29,0:29:81.27:0,81,1456	0/0:26,0:25:75.25:0,75,1346	0/0:20,0:20:57.20:0,57,1045
chr10	5463993	.	C	CATCT	933.74	PASS	AC=4;AF=0.091;AN=44;BaseQRankSum=-1.872;DP=493;FS=4.271;HRun=0;HaplotypeScore=98.4760;InbreedingCoeff=0.8679;MQ=77.27;MQ0=2;MQRankSum=-3.093;QD=30.12;ReadPosRankSum=-4.700;VQSLOD=2.1625;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/0:11,0:11:27.09:0,27,450	0/0:36,0:27:34.97:0,35,428	0/0:33,0:28:32.52:0,33,467	0/0:23,0:23:57.05:0,57,802	0/0:36,0:36:78.17:0,78,1234	0/0:21,0:21:42.11:0,42,661	1/1:13,15:29:51.14:1002,51,0	0/0:12,0:12:30.10:0,30,499	0/0:24,0:24:63.22:0,63,1045	0/0:17,0:17:33.06:0,33,476	0/0:25,0:25:51.13:0,51,793	0/0:24,0:24:45.14:0,45,718	0/0:18,0:18:48.10:0,48,758	./.	./.	0/0:10,0:10:0.88:0,1,2	0/0:21,0:21:45.14:0,45,715	1/1:2,0:2:5.93:40,6,0	./.	0/0:19,0:19:39.10:0,39,585	./.	0/0:22,0:22:45.10:0,45,707	0/0:14,0:14:33.07:0,33,519	./.	0/0:18,0:18:45.15:0,45,722	0/0:31,0:31:66.17:0,66,1052	0/0:11,0:11:21.07:0,21,344
chr10	5464050	.	A	ATC	41.04	PASS	AC=8;AF=0.160;AN=50;BaseQRankSum=6.190;DP=472;FS=13.758;HRun=0;HaplotypeScore=94.7931;InbreedingCoeff=0.8359;MQ=79.28;MQ0=5;MQRankSum=-5.849;QD=3.42;ReadPosRankSum=-0.240;VQSLOD=1.4434;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:12,0:12:36.12:0,36,550	0/0:41,0:21:42.51:0,43,493	0/0:47,0:31:32.81:0,33,457	0/0:14,0:14:42.13:0,42,618	0/0:25,0:25:75.21:0,75,1119	0/0:19,0:19:53.76:0,54,781	0/0:33,0:33:59.09:0,59,1193	0/0:14,0:14:39.13:0,39,593	0/0:24,0:24:69.23:0,69,1037	0/0:15,0:15:42.14:0,42,642	0/0:18,0:18:51.13:0,51,735	0/0:25,0:25:69.08:0,69,1031	0/0:19,0:19:54.16:0,54,799	./.	1/1:2,0:2:2.88:15,3,0	0/0:18,5:23:33.10:0,33,499	0/0:21,0:20:60.19:0,60,883	./.	1/1:1,1:2:2.96:19,3,0	0/0:19,0:19:54.18:0,54,823	1/1:1,2:3:7.27:98,7,0	0/0:15,0:15:45.15:0,45,687	0/0:15,0:15:42.14:0,42,638	1/1:5,0:5:7.37:32,7,0	0/0:21,0:21:39.73:0,40,642	0/0:26,0:26:34.08:0,34,570	0/0:11,0:11:26.68:0,27,396
chr10	5464157	.	GCCATGGGTA	G	2894.62	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=9.180;DP=397;FS=116.823;HRun=0;HaplotypeScore=113.5725;InbreedingCoeff=0.9296;MQ=86.88;MQ0=0;MQRankSum=-8.942;QD=90.46;ReadPosRankSum=2.138;VQSLOD=0.6129;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,3:4:12.04:378,12,0	0/0:7,0:7:21.07:0,21,1009	0/0:15,0:15:45.14:0,45,1864	0/0:18,0:18:48.08:0,48,2000	0/0:35,0:35:99:0,102,4905	0/0:28,0:28:84.29:0,84,4242	0/0:14,0:14:42.14:0,42,2127	0/0:26,0:26:78.26:0,78,3800	0/0:12,0:12:36.12:0,36,1782	0/0:21,0:21:63.20:0,63,2918	0/0:23,0:23:66.21:0,66,3083	0/0:14,0:14:39.13:0,39,1945	0/0:19,0:19:54.16:0,54,2545	0/0:12,0:12:36.12:0,36,1559	1/1:0,1:1:3.01:98,3,0	1/1:0,5:5:15.05:489,15,0	0/0:20,0:20:54.19:0,54,2732	0/0:13,0:13:39.13:0,39,1789	1/1:0,2:2:6.02:195,6,0	1/1:0,7:7:21.07:659,21,0	0/0:8,0:8:21.07:0,21,974	1/1:0,9:9:27.09:869,27,0	0/0:14,0:14:42.14:0,42,1906	0/0:16,0:16:48.14:0,48,2217	1/1:0,4:4:12.04:391,12,0	0/0:20,0:20:60.21:0,60,2944	0/0:23,0:23:66.23:0,66,3322	0/0:7,0:7:21.07:0,21,1062
chr10	5464194	.	C	CT	1032.49	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=9.692;DP=440;FS=52.810;HRun=6;HaplotypeScore=61.1140;InbreedingCoeff=0.9541;MQ=86.84;MQ0=0;MQRankSum=-6.846;QD=25.18;ReadPosRankSum=-1.598;VQSLOD=-0.4108;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,4:6:15.01:171,15,0	0/0:7,0:7:21.03:0,21,208	0/0:18,0:18:44.92:0,45,419	0/0:16,0:15:9.05:0,9,200	0/0:38,0:38:99:0,105,1055	0/0:25,0:25:72.16:0,72,734	0/0:17,0:17:45.10:0,45,459	0/0:28,0:28:72.14:0,72,729	0/0:15,0:15:42.09:0,42,429	0/0:25,0:25:72.16:0,72,734	0/0:24,0:24:72.16:0,72,734	0/0:15,0:15:42.09:0,42,429	0/0:21,0:21:60.14:0,60,612	0/0:12,0:12:24.05:0,24,245	1/1:0,4:4:12.04:151,12,0	1/1:0,3:3:9.03:113,9,0	0/0:24,0:23:53.95:0,54,542	0/0:8,0:8:21.05:0,21,214	1/1:4,4:8:15.05:186,15,0	1/1:2,6:8:18.06:226,18,0	0/0:6,0:6:15.03:0,15,153	1/1:0,8:8:23.95:243,24,0	0/0:20,0:20:57.12:0,57,581	0/0:22,0:22:60.14:0,60,612	1/1:1,3:4:12:133,12,0	0/0:28,0:28:78.15:0,78,780	0/0:23,0:23:63.14:0,63,643	0/0:7,0:7:21.05:0,21,214
chr10	5464259	.	G	GA	1772.82	PASS	AB=0.588;AC=13;AF=0.232;AN=56;BaseQRankSum=4.126;DP=481;FS=8.781;HRun=9;HaplotypeScore=54.7212;InbreedingCoeff=0.8712;MQ=75.51;MQ0=1;MQRankSum=-3.540;QD=22.44;ReadPosRankSum=-1.555;VQSLOD=3.6882;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,15:18:45.12:495,45,0	0/0:15,0:15:44.97:0,45,387	0/0:24,1:20:6.50:0,7,219	0/0:17,0:17:16.95:0,17,185	0/0:24,0:24:64.23:0,64,550	0/0:33,1:34:47.28:0,47,728	0/0:14,0:14:32.96:0,33,282	0/0:23,0:23:58.76:0,59,490	0/0:17,0:17:47.98:0,48,415	0/0:20,0:20:53.91:0,54,456	0/0:24,0:25:65.96:0,66,566	0/0:18,0:18:41.96:0,42,358	0/0:17,0:17:50.99:0,51,442	0/0:16,0:16:38.98:0,39,339	1/1:5,6:11:24.05:256,24,0	1/1:1,5:6:15.04:166,15,0	0/0:11,1:12:2.80:0,3,248	0/0:9,0:9:11.98:0,12,104	1/1:9,11:21:41.93:438,42,0	0/1:3,7:10:1.98:206,0,2	0/0:6,0:6:15:0,15,130	1/1:1,3:4:12.03:133,12,0	0/0:24,0:24:62.98:0,63,546	0/0:14,0:14:35.99:0,36,313	1/1:2,7:9:24.06:265,24,0	0/0:32,0:32:89.96:0,90,779	0/0:27,0:27:74.89:0,75,632	0/0:10,0:10:29.99:0,30,259
chr10	5464334	.	TAC	T	4413.63	PASS	AB=1.000;AC=16;AF=0.286;AN=56;BaseQRankSum=12.528;DP=493;FS=19.236;HRun=0;HaplotypeScore=63.7982;InbreedingCoeff=0.8701;MQ=68.93;MQ0=0;MQRankSum=-2.448;QD=35.88;ReadPosRankSum=1.803;VQSLOD=4.8720;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,19:22:57.18:848,57,0	0/0:12,0:12:33.10:0,33,591	0/1:5,0:5:0.02:0,0,176	0/1:11,0:11:12.72:13,0,427	0/0:24,0:24:72.21:0,72,1304	0/0:30,0:30:87.28:0,87,1633	0/0:13,0:13:36.11:0,36,662	0/0:29,0:29:87.26:0,87,1533	0/0:18,0:18:54.17:0,54,982	0/0:26,0:26:78.26:0,78,1464	0/0:14,0:14:39.13:0,39,753	0/0:21,0:21:63.22:0,63,1202	0/0:18,0:18:54.18:0,54,1003	0/0:16,0:16:48.15:0,48,865	1/1:0,13:13:39.10:571,39,0	1/1:0,12:12:36.09:526,36,0	0/0:13,0:13:39.11:0,39,717	0/0:10,0:10:30.08:0,30,541	1/1:2,11:13:36.11:530,36,0	1/1:0,16:16:39.13:596,39,0	0/0:13,0:13:39.13:0,39,753	1/1:0,15:15:42.14:642,42,0	0/0:25,0:25:68.93:0,69,1257	0/0:14,0:14:42.12:0,42,776	1/1:0,16:16:45.15:688,45,0	0/0:32,0:32:96.27:0,96,1727	0/0:27,0:27:81.28:0,81,1521	0/0:15,0:15:45.15:0,45,867
chr10	5464867	.	TAAATTTAAA	T	4564.84	PASS	AB=0.548;AC=9;AF=0.161;AN=56;BaseQRankSum=10.218;DP=376;FS=119.370;HRun=0;HaplotypeScore=115.2242;InbreedingCoeff=0.4239;MQ=72.99;MQ0=0;MQRankSum=-11.019;QD=71.33;ReadPosRankSum=1.159;VQSLOD=1.8059;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,10:11:28.65:802,29,0	0/0:10,0:10:30.10:0,30,1329	0/0:8,0:8:21.07:0,21,721	0/0:7,0:7:15.05:0,15,487	0/0:25,0:25:75.21:0,75,3280	0/0:19,0:19:57.18:0,57,2520	0/0:11,0:11:33.11:0,33,1497	0/0:33,0:33:99:0,99,4504	0/0:11,0:11:33.11:0,33,1629	0/0:23,0:23:69.24:0,69,3272	0/0:9,0:9:27.09:0,27,1338	0/0:9,0:9:27.09:0,27,1320	0/0:12,0:12:36.12:0,36,1771	0/0:13,0:13:39.13:0,39,1873	1/1:1,8:9:22.70:701,23,0	0/1:1,6:7:6.39:489,0,6	0/0:26,0:26:78.23:0,78,3593	0/0:11,0:11:33.11:0,33,1511	0/1:2,7:9:28.64:488,0,29	0/1:3,12:15:21.73:1128,0,22	0/0:4,0:4:12.02:0,12,397	0/1:1,5:6:7.57:393,0,8	0/0:15,0:15:45.15:0,45,2146	0/0:6,0:6:16.87:0,17,697	0/1:1,6:7:6.39:565,0,6	0/0:22,0:22:66.22:0,66,3082	0/0:20,0:20:60.19:0,60,2738	0/0:18,0:18:54.19:0,54,2605
chr10	5464916	.	G	GAAA	4735.77	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=2.823;DP=468;FS=28.233;HRun=9;HaplotypeScore=88.0541;InbreedingCoeff=0.9699;MQ=79.10;MQ0=0;MQRankSum=-8.720;QD=42.28;ReadPosRankSum=-1.218;VQSLOD=2.7778;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,15:19:39.13:694,39,0	0/0:4,0:4:12.04:0,12,152	0/0:9,0:9:8.76:0,9,89	0/0:18,0:18:21.96:0,22,232	0/0:33,0:34:88.85:0,89,1135	0/0:23,0:23:66.17:0,66,820	0/0:9,0:9:24.07:0,24,303	0/0:29,0:29:72.15:0,72,890	0/0:16,0:16:36.09:0,36,453	0/0:16,0:23:32.07:0,32,512	0/0:20,0:20:51.12:0,51,630	0/0:16,0:16:48.15:0,48,607	0/0:17,0:18:43.59:0,44,565	0/0:11,0:11:30.09:0,30,379	1/1:2,9:12:30.10:557,30,0	1/1:2,11:13:33.11:632,33,0	0/0:32,0:32:84.23:0,84,1055	0/0:6,0:6:15.04:0,15,190	1/1:9,6:15:27.09:487,27,0	1/1:8,19:31:78.17:1325,78,0	0/0:5,0:5:12.03:0,12,152	1/1:1,5:7:21.05:368,21,0	0/0:16,0:16:45.14:0,45,569	0/0:5,0:5:15.05:0,15,190	1/1:3,11:15:36.10:674,36,0	0/0:20,0:20:54.16:0,54,671	0/0:28,0:29:76.80:0,77,981	0/0:13,0:13:33.08:0,33,417
chr10	5465079	.	CT	C	4663.47	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=15.028;DP=613;FS=20.858;HRun=2;HaplotypeScore=94.2054;InbreedingCoeff=0.9984;MQ=84.11;MQ0=0;MQRankSum=-6.001;QD=34.54;ReadPosRankSum=1.315;VQSLOD=3.0462;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,24:25:63.20:816,63,0	0/0:11,0:11:33.11:0,33,495	0/0:21,0:21:63.20:0,63,877	0/0:20,0:20:51.12:0,51,693	0/0:27,0:27:75.22:0,75,1095	0/0:24,0:24:66.17:0,66,920	0/0:27,0:27:81.27:0,81,1208	0/0:29,0:29:81.27:0,81,1210	0/0:33,0:33:99:0,99,1413	0/0:21,0:21:63.21:0,63,942	0/0:19,0:19:57.18:0,57,829	0/0:23,0:23:69.23:0,69,1033	0/0:25,0:25:75.23:0,75,1097	0/0:23,0:23:69.22:0,69,1010	1/1:0,22:22:63.20:818,63,0	1/1:1,27:28:55.45:986,55,0	0/0:22,0:22:66.22:0,66,983	0/0:19,0:19:57.15:0,57,809	1/1:1,15:16:42.14:542,42,0	1/1:0,22:22:63.20:807,63,0	0/0:26,0:26:78.26:0,78,1168	1/1:1,12:13:36.12:461,36,0	0/0:14,0:14:42.14:0,42,629	0/0:16,0:16:42.14:0,42,630	1/1:1,8:9:18.06:233,18,0	0/0:35,0:35:46.67:0,47,550	0/0:31,0:31:92.01:0,92,627	0/0:12,0:12:35.58:0,36,241
chr10	5465193	.	CTTGGT	C	8162.60	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=14.052;DP=658;FS=16.268;HRun=0;HaplotypeScore=129.1602;InbreedingCoeff=0.9969;MQ=80.46;MQ0=0;MQRankSum=-8.979;QD=50.70;ReadPosRankSum=1.480;VQSLOD=4.1806;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,29:31:60.21:1279,60,0	0/0:5,0:5:15.05:0,15,470	0/0:22,0:22:51.18:0,51,1407	0/0:20,0:20:48.20:0,48,1623	0/0:33,0:33:96.33:0,96,2991	0/0:29,0:29:81.28:0,81,2534	0/0:26,0:26:75.26:0,75,2321	0/0:37,0:37:99:0,99,3059	0/0:17,0:17:48.16:0,48,1422	0/0:26,0:26:72.25:0,72,2256	0/0:15,0:15:42.14:0,42,1258	0/0:26,0:26:78.27:0,78,2309	0/0:36,0:36:96.33:0,96,2976	0/0:21,0:21:57.20:0,57,1775	1/1:0,22:22:63.22:1299,63,0	1/1:1,27:28:72.25:1534,72,0	0/0:31,0:31:87.30:0,87,2697	0/0:14,0:14:36.12:0,36,1128	1/1:6,7:13:30.08:563,30,0	1/1:3,27:30:75.25:1533,75,0	0/0:31,0:31:90.31:0,90,2712	1/1:0,25:25:60.07:1251,60,0	0/0:21,0:21:63.21:0,63,1752	0/0:19,0:19:57.20:0,57,1733	1/1:0,12:12:33.11:703,33,0	0/0:22,0:22:63.21:0,63,1822	0/0:30,0:30:84.29:0,84,2607	0/0:16,0:16:48.16:0,48,1445
chr10	5465542	.	TGG	T	5978.06	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=15.911;DP=598;FS=13.099;HRun=9;HaplotypeScore=105.9036;InbreedingCoeff=0.9629;MQ=75.15;MQ0=0;MQRankSum=-2.467;QD=29.45;ReadPosRankSum=2.843;VQSLOD=3.7241;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,35:39:96.27:1114,96,0	0/0:7,0:8:23.55:0,24,325	0/0:20,0:18:48.55:0,49,623	0/0:8,0:8:11.07:0,11,138	0/0:30,0:30:68.72:0,69,1071	0/0:24,0:24:63.19:0,63,985	0/0:18,0:19:47.64:0,48,724	0/0:22,0:22:51.14:0,51,764	0/0:24,0:24:58.97:0,59,863	0/0:24,0:24:63.21:0,63,1026	0/0:9,0:9:21.07:0,21,341	0/0:27,0:27:78.25:0,78,1253	0/0:26,0:26:69.22:0,69,1082	0/0:16,0:16:42.14:0,42,686	1/1:6,35:41:99:1149,99,0	1/1:0,27:27:75.22:873,75,0	0/0:2,0:3:5.50:0,6,38	0/0:12,0:12:33.11:0,33,542	1/1:2,21:23:63.17:717,63,0	1/1:3,30:33:93.27:1082,93,0	0/0:22,0:22:54.16:0,54,824	1/1:2,21:23:57.16:658,57,0	0/0:16,0:16:45.13:0,45,691	0/0:25,0:25:66.21:0,66,1060	1/1:3,14:17:33.09:384,33,0	0/0:9,0:22:38.45:0,38,189	0/0:5,0:34:78.50:0,78,331	0/0:0,0:4:9.98:0,10,35
chr10	5466247	.	CGTG	C	1494.12	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.441;DP=642;FS=3.374;HRun=0;HaplotypeScore=91.2487;InbreedingCoeff=0.9906;MQ=86.67;MQ0=0;MQRankSum=-2.912;QD=39.32;ReadPosRankSum=2.851;VQSLOD=4.3235;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,144,3427	0/0:8,0:8:24.08:0,24,591	0/0:30,0:29:84.29:0,84,1957	0/0:16,0:16:37.34:0,37,947	0/0:26,0:26:75.17:0,75,1650	0/0:21,0:21:63.15:0,63,1469	0/0:29,0:29:87.26:0,87,2038	0/0:34,0:34:99:0,99,2345	0/0:27,0:27:81.28:0,81,1948	0/0:19,0:19:57.19:0,57,1330	0/0:14,0:14:42.14:0,42,998	0/0:21,0:21:63.18:0,63,1499	0/0:19,0:19:57.20:0,57,1401	0/0:19,0:19:57.09:0,57,1247	1/1:0,15:14:39.13:726,39,0	0/0:16,0:16:48.12:0,48,1118	0/0:36,0:36:99:0,108,2654	0/0:15,0:15:42.10:0,42,956	0/0:11,0:11:33.09:0,33,762	0/0:26,0:26:72.14:0,72,1611	0/0:44,0:44:99:0,129,3144	0/0:17,0:17:51.16:0,51,1205	0/0:17,0:17:51.18:0,51,1254	0/0:37,0:37:99:0,111,2620	1/1:0,23:23:48.16:890,48,0	0/0:31,0:31:90.27:0,90,2163	0/0:16,0:15:48.16:0,48,1179	0/0:6,0:6:15.05:0,15,360
chr10	5467341	.	GA	G	2717.12	PASS	AB=0.820;AC=13;AF=0.232;AN=56;BaseQRankSum=9.868;DP=535;FS=5.541;HRun=9;HaplotypeScore=66.1236;InbreedingCoeff=0.7617;MQ=72.01;MQ0=0;MQRankSum=-0.558;QD=18.61;ReadPosRankSum=1.427;VQSLOD=4.0576;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:2,0:27:56.82:0,57,289	0/1:8,1:9:3.39:3,0,218	0/1:11,0:11:0.10:0,0,189	0/0:8,0:8:10.96:0,11,66	0/0:29,0:29:81.19:0,81,902	0/0:18,0:18:45.13:0,45,519	0/0:9,0:10:26.90:0,27,280	0/0:29,0:30:81.07:0,81,915	0/0:22,0:23:62.99:0,63,687	0/0:22,0:22:63.18:0,63,718	0/0:27,0:27:69.20:0,69,788	0/0:16,0:16:48.13:0,48,545	0/0:17,0:17:51.11:0,51,570	0/0:15,0:15:42.12:0,42,484	1/1:4,24:28:72.04:659,72,0	1/1:2,17:19:19.41:432,19,0	0/0:20,0:19:51.15:0,51,588	0/0:12,0:12:30.09:0,30,346	1/1:7,21:28:66.02:604,66,0	1/1:0,19:19:54.02:494,54,0	0/0:13,0:13:33.09:0,33,371	1/1:3,15:18:48.02:439,48,0	0/0:19,0:19:57.16:0,57,649	0/0:12,0:12:36.09:0,36,404	0/1:3,11:14:30.06:263,0,30	0/0:24,0:24:66.18:0,66,746	0/0:37,0:37:99:0,102,1173	0/0:10,0:10:27.08:0,27,312
chr10	5467433	.	CA	C	4504.73	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=13.534;DP=618;FS=0.772;HRun=2;HaplotypeScore=93.7986;InbreedingCoeff=0.9987;MQ=78.82;MQ0=0;MQRankSum=-3.351;QD=35.47;ReadPosRankSum=3.835;VQSLOD=5.1549;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:72.24:0,72,1078	0/0:11,0:11:33.11:0,33,494	0/0:19,0:19:51.12:0,51,661	0/0:13,0:13:33.09:0,33,426	0/0:35,0:35:99:0,105,1473	0/0:28,0:28:84.27:0,84,1238	0/0:19,0:19:57.18:0,57,818	0/0:27,0:27:81.24:0,81,1126	0/0:31,0:31:93.29:0,93,1355	0/0:16,0:16:45.14:0,45,652	0/0:24,0:24:72.20:0,72,1054	0/0:19,0:19:57.18:0,57,833	0/0:20,0:20:60.20:0,60,895	0/0:18,0:18:54.18:0,54,807	1/1:4,23:27:69.22:892,69,0	1/1:1,21:22:21.07:746,21,0	0/0:17,0:17:51.17:0,51,764	0/0:10,0:10:27.09:0,27,405	1/1:0,10:10:30.10:389,30,0	1/1:0,25:25:72.23:932,72,0	0/0:28,0:28:81.24:0,81,1154	1/1:0,21:21:57.19:738,57,0	0/0:21,0:21:63.21:0,63,942	0/0:22,0:22:66.21:0,66,969	1/1:1,21:22:63.20:809,63,0	0/0:34,0:34:96.20:0,96,1376	0/0:39,0:39:95.89:0,96,1357	0/0:12,0:12:33.11:0,33,477
chr10	5467480	.	C	CTGTGTG	6887.07	PASS	AB=0.579;AC=15;AF=0.268;AN=56;BaseQRankSum=15.220;DP=669;FS=0.000;HRun=0;HaplotypeScore=185.6137;InbreedingCoeff=0.6622;MQ=61.53;MQ0=0;MQRankSum=-8.060;QD=31.74;ReadPosRankSum=1.220;VQSLOD=4.6253;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:96.26:0,96,2080	0/0:18,0:18:51.18:0,51,1247	0/0:12,0:11:26.73:0,27,281	0/0:7,0:6:9.28:0,9,105	0/0:44,0:44:99:0,129,3117	0/0:29,0:29:84.24:0,84,1878	0/0:25,0:25:72.22:0,72,1649	0/0:39,0:39:99:0,100,2114	0/0:29,0:29:81.25:0,81,1845	0/0:28,0:28:81.27:0,81,1947	0/0:16,0:16:48.16:0,48,1174	0/0:19,0:19:57.18:0,57,1352	0/0:18,0:18:48.16:0,48,1176	0/0:22,0:22:60.18:0,60,1374	1/1:3,0:15:8.27:161,8,0	0/1:9,0:21:48.65:302,0,49	0/0:16,0:16:48.16:0,48,1133	0/0:9,0:9:21.05:0,21,423	1/1:6,0:15:0.06:233,0,0	1/1:7,0:37:57.09:502,57,0	0/0:37,0:37:99:0,99,2287	0/1:4,0:18:9.59:161,0,10	0/0:25,0:25:69.09:0,69,1490	0/0:24,0:24:72.25:0,72,1693	1/1:7,0:21:36.04:235,36,0	0/1:5,24:35:51.91:2419,0,52	1/1:4,27:38:63.17:1942,63,0	1/1:0,13:16:30.10:934,30,0
chr10	5467875	.	TTTTC	T	2093.66	PASS	AB=1.000;AC=22;AF=0.393;AN=56;BaseQRankSum=12.465;DP=609;FS=2.116;HRun=0;HaplotypeScore=105.7216;InbreedingCoeff=0.8031;MQ=52.97;MQ0=16;MQRankSum=-7.079;QD=7.27;ReadPosRankSum=0.540;VQSLOD=2.6673;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:13,27:36:35.99:476,36,0	0/0:4,0:4:12.04:0,12,251	0/0:23,0:13:13.88:0,14,135	0/0:11,0:6:5.99:0,6,52	0/0:27,0:27:54:0,54,977	0/0:22,0:22:45.03:0,45,685	0/0:26,0:24:44.91:0,45,734	1/1:22,0:20:25.18:200,25,0	0/0:16,0:16:27.06:0,27,463	0/0:34,0:34:71.36:0,71,1263	0/0:17,0:16:33.10:0,33,705	0/0:21,0:21:48.16:0,48,1057	0/0:17,0:17:33.09:0,33,661	0/0:13,0:12:21.04:0,21,401	1/1:25,0:25:29.99:272,30,0	1/1:19,0:18:17.99:162,18,0	1/1:13,0:26:26.31:236,26,0	0/0:35,0:31:69.23:0,69,1413	1/1:18,0:16:5.99:50,6,0	1/1:24,0:23:8.91:61,9,0	0/0:12,0:12:24.04:0,24,428	1/1:12,0:11:14.92:123,15,0	0/0:21,0:21:30.86:0,31,486	0/0:22,0:21:45.13:0,45,887	1/1:17,0:18:20.99:189,21,0	0/1:33,0:32:35.75:300,0,36	1/1:33,1:33:30.14:226,30,0	0/1:11,0:11:11.56:12,0,25
chr10	5467887	.	CTTTCTTTCT	C	3233.06	PASS	AB=0.972;AC=15;AF=0.268;AN=56;BaseQRankSum=8.141;DP=592;FS=8.094;HRun=0;HaplotypeScore=136.8724;InbreedingCoeff=0.8543;MQ=49.26;MQ0=35;MQRankSum=-6.535;QD=20.46;ReadPosRankSum=0.693;VQSLOD=2.5505;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:36:57.04:0,57,748	0/0:4,0:4:12.04:0,12,521	0/0:19,0:10:23.88:0,24,369	0/0:9,0:4:11.39:0,11,128	0/0:27,0:27:69.19:0,69,2288	0/0:17,0:16:48.15:0,48,1599	0/0:26,0:24:54.15:0,54,1681	1/1:21,0:15:6.13:277,6,0	0/0:15,0:13:27.09:0,27,1040	0/0:30,0:30:80.63:0,81,2877	0/0:21,0:20:51.14:0,51,1666	0/0:22,0:21:58.06:0,58,2257	0/0:15,0:15:45.11:0,45,1480	0/0:13,0:12:24.08:0,24,893	1/1:3,20:23:30.10:901,30,0	1/1:4,13:15:18.06:499,18,0	0/1:34,1:26:99:370,0,116	0/0:41,0:33:78.73:0,79,3071	1/1:3,9:9:23.99:285,24,0	1/1:3,15:17:9.03:120,9,0	0/0:12,0:11:27.09:0,27,904	1/1:3,10:13:21.02:437,21,0	0/0:20,0:20:51.49:0,51,1335	0/0:21,0:20:48.14:0,48,1922	1/1:6,12:16:21.07:537,21,0	0/0:36,0:33:87.52:0,88,1516	0/0:31,0:28:30.51:0,31,394	0/0:13,0:12:9.01:0,9,156
chr10	5467888	.	TTTCTTTC	T	2785.53	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=10.074;DP=583;FS=2.920;HRun=0;HaplotypeScore=119.0805;InbreedingCoeff=0.6574;MQ=49.22;MQ0=35;MQRankSum=-7.740;QD=12.49;ReadPosRankSum=-0.408;VQSLOD=2.7742;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:36:48.85:0,49,365	0/0:4,0:4:12.04:0,12,416	0/0:18,0:10:20.62:0,21,270	0/0:9,0:4:11.39:0,11,128	0/0:26,0:26:69.14:0,69,1845	0/0:17,0:16:48.15:0,48,1335	0/0:25,0:23:54.13:0,54,1375	1/1:8,13:15:36.10:524,36,0	0/0:14,0:12:27.09:0,27,846	0/0:29,0:29:80.62:0,81,2330	0/0:21,0:20:51.13:0,51,1365	0/0:22,0:21:58.40:0,58,1816	0/0:15,0:15:45.09:0,45,1209	0/0:13,0:12:24.07:0,24,700	1/1:23,0:23:30.10:596,30,0	1/1:17,0:15:18.06:346,18,0	0/1:35,0:26:71.94:434,0,72	0/0:41,0:33:78.19:0,78,2465	1/1:12,0:9:3.45:167,3,0	1/1:18,0:17:9.03:120,9,0	0/0:12,0:11:27.07:0,27,736	1/1:13,0:12:20.86:303,21,0	0/0:20,0:20:48.13:0,48,1055	0/0:21,0:20:48.14:0,48,1570	1/1:18,0:16:21.07:394,21,0	0/1:36,0:33:28.95:29,0,665	0/1:30,0:27:64.72:65,0,95	0/0:11,0:10:0.31:0,0,102
chr10	5467892	.	TTTC	T	2580.12	PASS	AB=0.794;AC=20;AF=0.357;AN=56;BaseQRankSum=11.444;DP=568;FS=1.395;HRun=0;HaplotypeScore=87.0226;InbreedingCoeff=0.6543;MQ=48.19;MQ0=37;MQRankSum=-4.732;QD=9.70;ReadPosRankSum=2.937;VQSLOD=3.2537;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:41,1:36:1.48:319,1,0	0/0:4,0:4:12.03:0,12,208	0/0:17,0:9:16.87:0,17,146	0/0:7,0:3:5.99:0,6,52	0/0:24,0:23:62.92:0,63,891	0/0:19,0:18:48.02:0,48,666	0/0:27,0:25:47.80:0,48,677	1/1:20,0:14:32.70:261,33,0	0/0:14,0:12:27.05:0,27,423	0/0:27,0:27:77.31:0,77,1141	0/0:21,0:19:45.07:0,45,711	0/0:20,0:19:55:0,55,929	0/0:14,0:14:36.07:0,36,598	0/0:12,0:11:24.03:0,24,373	1/1:22,0:22:27.91:203,28,0	1/1:16,0:14:17.89:128,18,0	0/1:34,0:25:92.68:111,0,93	0/0:43,0:35:81.13:0,81,1346	0/1:11,0:8:5.61:31,0,6	1/1:17,0:16:8.91:61,9,0	0/0:11,0:10:27.03:0,27,402	1/1:13,0:12:13.80:95,14,0	0/0:21,0:21:48.86:0,49,585	0/0:21,0:20:51.11:0,51,872	1/1:19,0:17:20.19:141,20,0	0/1:6,27:30:5.65:932,0,6	1/1:6,23:26:32.55:455,33,0	0/1:4,6:9:41.90:42,0,44
chr10	5468143	.	T	TTG	4691.86	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=5.847;DP=661;FS=26.039;HRun=0;HaplotypeScore=91.3944;InbreedingCoeff=0.9994;MQ=85.09;MQ0=0;MQRankSum=-11.075;QD=49.91;ReadPosRankSum=-2.360;VQSLOD=3.1288;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:87.28:0,87,1297	0/0:13,0:13:36.12:0,36,549	0/0:19,0:19:57.08:0,57,751	0/0:26,0:26:66.18:0,66,955	0/0:35,0:35:99:0,99,1509	0/0:20,0:20:54.16:0,54,764	0/0:26,0:26:75.22:0,75,1105	0/0:27,0:27:81.24:0,81,1147	0/0:35,0:35:99:0,105,1520	0/0:28,0:28:81.23:0,81,1155	0/0:21,0:21:63.20:0,63,940	0/0:37,0:37:99:0,111,1638	0/0:20,0:20:57.19:0,57,866	0/0:16,0:16:45.14:0,45,667	1/1:1,15:16:42.14:803,42,0	1/1:0,10:10:27.09:518,27,0	0/0:32,0:32:93.27:0,93,1356	0/0:14,0:14:42.14:0,42,643	1/1:0,9:9:27.08:486,27,0	1/1:4,31:35:96.32:1684,96,0	0/0:44,0:44:99:0,126,1825	1/1:2,11:13:39.11:646,39,0	0/0:19,0:19:54.16:0,54,797	0/0:31,0:31:90.31:0,90,1377	1/1:0,11:11:30.10:555,30,0	0/0:24,0:24:69.23:0,69,1024	0/0:33,0:33:99:0,99,1462	0/0:11,0:11:33.11:0,33,505
chr10	5468163	.	T	TA	2291.08	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=10.738;DP=672;FS=24.709;HRun=2;HaplotypeScore=90.9193;InbreedingCoeff=0.9986;MQ=84.11;MQ0=0;MQRankSum=-11.109;QD=35.80;ReadPosRankSum=-0.554;VQSLOD=1.5374;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:81.23:0,81,988	0/0:13,0:13:39.12:0,39,483	0/0:16,0:16:48.13:0,48,569	0/0:30,0:30:79.49:0,79,886	0/0:39,0:39:99:0,114,1387	0/0:20,0:20:54.17:0,54,666	0/0:25,0:25:72.21:0,72,879	0/0:26,0:26:78.23:0,78,946	0/0:33,0:33:99:0,99,1215	0/0:27,0:27:81.25:0,81,1004	0/0:18,0:18:54.17:0,54,669	0/0:38,0:38:99:0,108,1337	0/0:26,0:26:75.22:0,75,916	0/0:20,0:20:51.12:0,51,614	0/0:14,0:14:39.12:0,39,482	1/1:2,11:13:36.09:495,36,0	0/0:38,0:38:99:0,108,1338	0/0:12,0:12:36.11:0,36,446	1/1:1,7:8:21.07:302,21,0	1/1:3,27:30:81.23:1137,81,0	0/0:38,0:38:99:0,111,1376	1/1:0,13:13:36.12:517,36,0	0/0:22,0:22:63.20:0,63,781	0/0:33,0:33:96.26:0,96,1173	0/0:13,0:13:39.11:0,39,471	0/0:28,0:28:75.23:0,75,929	0/0:34,0:34:93.28:0,93,1138	0/0:10,0:10:30.09:0,30,372
chr10	5468215	.	TC	T	2267.48	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=4.468;DP=665;FS=5.203;HRun=2;HaplotypeScore=100.8703;InbreedingCoeff=0.8450;MQ=80.21;MQ0=0;MQRankSum=2.950;QD=34.36;ReadPosRankSum=-0.770;VQSLOD=3.2067;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:84.16:0,84,1199	0/0:11,0:11:33.11:0,33,492	0/0:26,0:26:44.30:0,44,874	0/0:22,0:21:47.98:0,48,646	0/0:21,0:21:63.20:0,63,913	0/0:22,0:22:54.17:0,54,789	0/0:30,0:30:90.29:0,90,1330	1/1:1,24:25:72.21:909,72,0	0/0:29,0:29:87.28:0,87,1283	0/0:22,0:22:63.19:0,63,922	0/0:13,0:13:36.12:0,36,526	0/0:23,0:23:69.23:0,69,1033	0/0:29,0:29:87.24:0,87,1223	0/0:21,0:21:60.19:0,60,879	0/0:19,0:19:9:0,9,207	0/0:15,0:15:23.92:0,24,203	1/1:1,40:41:99:1480,114,0	0/0:17,0:17:51.09:0,51,696	0/0:19,0:18:12.03:0,12,244	0/0:33,0:33:42.75:0,43,341	0/0:35,0:35:99:0,105,1512	0/0:17,0:17:1.90:0,2,130	0/0:20,0:20:54.18:0,54,802	0/0:33,0:33:99:0,99,1482	0/0:19,0:19:10.01:0,10,204	0/0:26,0:26:78.26:0,78,1151	0/0:33,0:33:99:0,99,1483	0/0:8,0:8:24.06:0,24,338
chr10	5468234	.	CAAGGG	C	1565.83	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.027;DP=647;FS=15.907;HRun=0;HaplotypeScore=143.8465;InbreedingCoeff=0.9911;MQ=86.32;MQ0=0;MQRankSum=-6.243;QD=43.50;ReadPosRankSum=0.942;VQSLOD=3.0043;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,34:36:78.27:1661,78,0	0/0:9,0:9:24.08:0,24,741	0/0:30,0:30:75.21:0,75,2103	0/0:26,0:26:67.93:0,68,1875	0/0:23,0:23:63.22:0,63,1894	0/0:22,0:22:66.18:0,66,1805	0/0:31,0:31:90.31:0,90,2606	0/0:22,0:22:63.22:0,63,1779	0/0:32,0:32:96.32:0,96,2915	0/0:31,0:31:87.30:0,87,2652	0/0:14,0:14:42.14:0,42,1274	0/0:32,0:32:90.31:0,90,2725	0/0:29,0:29:75.26:0,75,2213	0/0:26,0:26:78.27:0,78,2379	0/0:12,0:12:33.11:0,33,906	0/0:9,0:9:24.08:0,24,749	0/0:35,0:35:99:0,99,2807	0/0:19,0:19:54.17:0,54,1546	0/0:16,0:16:42.13:0,42,1099	0/0:19,0:19:57.20:0,57,1719	0/0:32,0:32:90.31:0,90,2645	0/0:11,0:11:30.10:0,30,936	0/0:18,0:18:51.18:0,51,1568	0/0:27,0:27:78.27:0,78,2425	0/0:13,0:13:36.12:0,36,1124	0/0:33,0:33:96.33:0,96,2840	0/0:32,0:32:96.33:0,96,2940	0/0:7,0:7:21.07:0,21,584
chr10	5468347	.	GT	G	4273.61	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=15.930;DP=676;FS=17.408;HRun=1;HaplotypeScore=87.6034;InbreedingCoeff=0.9994;MQ=84.91;MQ0=0;MQRankSum=-2.323;QD=37.82;ReadPosRankSum=0.008;VQSLOD=3.0496;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,138,2157	0/0:13,0:13:39.13:0,39,623	0/0:24,0:24:64.96:0,65,1036	0/0:22,0:22:45.45:0,45,892	0/0:35,0:35:99:0,105,1625	0/0:25,0:25:75.26:0,75,1195	0/0:20,0:20:57.17:0,57,862	0/0:32,0:32:96.32:0,96,1511	0/0:19,0:19:54.17:0,54,840	0/0:20,0:20:60.18:0,60,907	0/0:29,0:28:75.24:0,75,1173	0/0:29,0:29:87.30:0,87,1386	0/0:28,0:28:84.29:0,84,1339	0/0:27,0:27:81.28:0,81,1292	1/1:0,18:18:51.17:713,51,0	1/1:0,12:12:33.11:461,33,0	0/0:25,0:25:75.24:0,75,1168	0/0:20,0:20:60.20:0,60,959	1/1:0,10:10:30.09:398,30,0	1/1:0,29:29:81.23:1110,81,0	0/0:24,0:24:72.25:0,72,1151	1/1:0,22:22:57.19:795,57,0	0/0:26,0:26:78.24:0,78,1210	0/0:29,0:29:84.23:0,84,1290	1/1:0,22:22:57.19:797,57,0	0/0:24,0:24:72.25:0,72,1143	0/0:33,0:33:99:0,99,1527	0/0:9,0:9:24.08:0,24,383
chr10	5469051	.	ATTT	A	2157.24	PASS	AB=0.553;AC=8;AF=0.143;AN=56;BaseQRankSum=14.218;DP=541;FS=3.262;HRun=3;HaplotypeScore=108.0400;InbreedingCoeff=0.4179;MQ=70.40;MQ0=0;MQRankSum=-13.351;QD=22.71;ReadPosRankSum=2.501;VQSLOD=1.0913;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,132,3203	0/0:7,0:7:21.05:0,21,462	0/0:21,0:21:57.07:0,57,1247	0/0:10,0:9:27.09:0,27,647	0/0:23,0:23:66.23:0,66,1618	0/0:16,0:16:48.16:0,48,1130	0/0:12,0:12:36.12:0,36,887	0/0:34,0:34:99:0,102,2350	0/0:6,0:6:18.06:0,18,443	0/0:32,0:32:93.31:0,93,2218	0/0:19,0:19:57.20:0,57,1371	0/0:9,0:9:27.08:0,27,617	0/0:14,0:14:42.13:0,42,986	0/0:17,0:17:48.64:0,49,1175	1/1:2,13:15:25.39:417,25,0	0/1:1,13:14:31.86:368,0,32	0/0:32,0:32:96.31:0,96,2295	0/0:15,0:15:42.14:0,42,1035	0/1:3,10:13:53.71:292,0,54	1/1:2,16:18:31.31:465,31,0	0/0:17,0:17:51.16:0,51,1198	0/1:5,16:21:30.14:456,0,30	0/0:21,0:21:63.22:0,63,1528	0/0:15,0:15:45.14:0,45,1047	0/1:3,11:14:17.03:308,0,17	0/0:34,0:34:99:0,102,2406	0/0:34,0:33:99:0,102,2482	0/0:14,0:14:42.13:0,42,961
chr10	5469055	.	ATAG	A	2063.69	PASS	AB=0.573;AC=7;AF=0.125;AN=56;BaseQRankSum=14.203;DP=552;FS=1.450;HRun=0;HaplotypeScore=111.5490;InbreedingCoeff=0.1933;MQ=74.38;MQ0=0;MQRankSum=-13.571;QD=20.04;ReadPosRankSum=3.022;VQSLOD=3.7893;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,132,3138	0/0:5,0:5:15.05:0,15,370	0/0:24,0:24:57.20:0,57,1283	0/0:15,0:14:33.08:0,33,628	0/0:26,0:26:75.23:0,75,1714	0/0:15,0:15:45.15:0,45,1106	0/0:13,0:13:39.13:0,39,956	0/0:33,0:33:99:0,99,2336	0/0:6,0:6:18.05:0,18,395	0/0:30,0:30:90.31:0,90,2206	0/0:19,0:19:57.20:0,57,1370	0/0:8,0:8:24.08:0,24,567	0/0:13,0:13:39.13:0,39,951	0/0:18,0:18:51.17:0,51,1228	1/1:2,13:15:14.80:403,15,0	0/1:3,13:16:69.75:360,0,70	0/0:31,0:31:93.28:0,93,2190	0/0:15,0:15:42.14:0,42,1035	0/1:5,10:15:94.89:284,0,95	0/1:5,16:21:10.54:422,0,11	0/0:17,0:17:51.18:0,51,1237	0/1:4,16:20:66.57:429,0,67	0/0:22,0:22:66.23:0,66,1614	0/0:17,0:17:51.15:0,51,1144	0/1:5,11:16:94.47:300,0,94	0/0:30,0:30:90.31:0,90,2219	0/0:36,0:35:99:0,108,2511	0/0:12,0:12:36.10:0,36,836
chr10	5469697	.	GA	G	3456.68	PASS	AC=12;AF=0.222;AN=54;BaseQRankSum=13.145;DP=585;FS=15.146;HRun=1;HaplotypeScore=73.4209;InbreedingCoeff=0.9842;MQ=97.88;MQ0=0;MQRankSum=-3.447;QD=34.92;ReadPosRankSum=1.385;VQSLOD=2.1499;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,120,1902	0/0:12,0:12:36.12:0,36,572	0/0:28,0:28:75.64:0,76,1112	0/0:38,0:37:93.72:0,94,1338	0/0:13,0:13:24.08:0,24,372	0/0:16,0:16:36.09:0,36,520	0/0:40,0:40:99:0,105,1678	./.	0/0:25,0:24:63.21:0,63,1007	0/0:11,0:11:33.11:0,33,528	0/0:5,0:5:15.05:0,15,240	0/0:22,0:22:50.89:0,51,790	0/0:19,0:19:36.12:0,36,570	0/0:31,0:31:75.25:0,75,1183	1/1:0,30:27:63.21:880,63,0	1/1:1,22:23:18.24:832,18,0	0/0:25,0:25:63.21:0,63,1007	0/0:25,0:25:63.21:0,63,1006	1/1:0,17:17:48.16:668,48,0	1/1:0,14:14:36.12:503,36,0	0/0:33,0:33:96.33:0,96,1534	1/1:1,4:5:15.04:195,15,0	0/0:7,0:7:11.61:0,12,191	0/0:37,0:36:99:0,108,1700	1/1:0,10:10:27.09:377,27,0	0/0:19,0:19:57.19:0,57,907	0/0:26,0:26:60.20:0,60,953	0/0:12,0:12:33.11:0,33,527
chr10	5469816	.	A	AC	2121.58	PASS	AB=0.577;AC=11;AF=0.212;AN=52;BaseQRankSum=10.120;DP=522;FS=19.396;HRun=1;HaplotypeScore=75.7015;InbreedingCoeff=0.8688;MQ=47.73;MQ0=21;MQRankSum=-6.485;QD=22.81;ReadPosRankSum=-0.765;VQSLOD=2.2566;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:40:69.22:0,69,895	0/0:7,0:7:21.07:0,21,268	0/0:7,0:4:4.56:0,5,43	./.	0/0:12,0:12:27.09:0,27,351	0/0:26,0:23:54.13:0,54,658	0/0:44,0:40:87.15:0,87,1072	./.	0/0:14,0:14:27.09:0,27,350	0/0:22,0:22:66.21:0,66,853	0/0:11,0:11:27.09:0,27,350	0/0:14,0:12:30.10:0,30,390	0/0:21,0:20:36.12:0,36,465	0/0:18,0:18:33.11:0,33,429	1/1:1,18:15:24.08:353,24,0	0/1:4,11:14:5.97:334,0,6	0/0:34,0:32:63.20:0,63,817	0/0:20,0:18:33.06:0,33,409	1/1:7,14:17:42.14:611,42,0	1/1:0,9:8:15.05:220,15,0	0/0:40,0:38:81.22:0,81,1032	1/1:0,16:13:27.01:349,27,0	0/0:15,0:15:30.07:0,30,389	0/0:22,0:20:33.11:0,33,428	1/1:2,11:11:30.10:428,30,0	0/0:18,0:17:45.15:0,45,584	0/0:21,0:21:57.17:0,57,725	0/0:8,0:8:11.67:0,12,155
chr10	5470176	.	AC	A	4241.14	PASS	AC=12;AF=0.222;AN=54;BaseQRankSum=14.946;DP=554;FS=0.000;HRun=1;HaplotypeScore=74.3347;InbreedingCoeff=0.9939;MQ=68.60;MQ0=0;MQRankSum=-1.275;QD=39.27;ReadPosRankSum=1.602;VQSLOD=5.4278;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,129,2034	0/0:5,0:5:15.05:0,15,240	0/0:18,0:18:54.18:0,54,844	0/0:21,0:20:54.15:0,54,786	0/0:20,0:20:54.18:0,54,863	0/0:10,0:10:27.09:0,27,427	0/0:25,0:25:72.22:0,72,1120	./.	0/0:26,0:26:78.25:0,78,1223	0/0:21,0:21:63.21:0,63,1006	0/0:10,0:10:24.08:0,24,384	0/0:23,0:23:69.24:0,69,1099	0/0:21,0:21:63.21:0,63,1007	0/0:28,0:28:81.28:0,81,1293	1/1:0,21:21:60.20:839,60,0	1/1:0,18:18:51.17:713,51,0	0/0:29,0:29:87.26:0,87,1363	0/0:20,0:20:60.16:0,60,931	1/1:0,17:17:51.13:676,51,0	1/1:0,21:21:54.18:755,54,0	0/0:34,0:34:99:0,102,1608	1/1:0,9:9:27.09:377,27,0	0/0:8,0:8:24.08:0,24,384	0/0:35,0:35:99:0,102,1622	1/1:0,22:22:63.21:881,63,0	0/0:22,0:21:63.21:0,63,987	0/0:20,0:20:60.19:0,60,935	0/0:6,0:6:18.06:0,18,287
chr10	5470366	.	A	AC	290.34	PASS	AB=0.832;AC=5;AF=0.093;AN=54;BaseQRankSum=7.213;DP=589;FS=7.059;HRun=0;HaplotypeScore=118.3140;InbreedingCoeff=-0.0985;MQ=62.93;MQ0=24;MQRankSum=-4.104;QD=2.00;ReadPosRankSum=3.822;VQSLOD=2.1455;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:24:63.97:0,64,509	0/0:6,0:6:17.57:0,18,158	0/1:62,0:23:5.01:5,0,111	0/0:37,0:12:11.78:0,12,60	0/0:28,0:28:78.22:0,78,642	0/0:15,0:15:41.87:0,42,333	0/0:18,0:18:50.20:0,50,413	./.	0/0:25,0:23:64.63:0,65,505	0/0:20,0:20:59.60:0,60,510	0/0:13,0:12:28.59:0,29,222	0/0:13,0:13:38.26:0,38,295	0/0:11,0:11:29.87:0,30,238	0/0:18,0:18:49.37:0,49,350	0/0:23,0:22:42.97:0,43,335	0/1:6,8:13:27.51:112,0,28	0/0:22,0:22:59.84:0,60,502	0/0:18,0:17:47.79:0,48,377	0/1:17,3:18:68.13:118,0,68	0/1:25,6:31:99:151,0,110	0/0:18,0:17:43.67:0,44,356	0/1:14,4:18:15.51:16,0,103	0/0:17,0:17:44.66:0,45,369	0/0:29,0:29:72.46:0,72,587	0/0:23,0:21:36.43:0,36,297	0/0:20,0:17:50.68:0,51,419	0/0:36,0:35:97.01:0,97,801	0/0:7,0:6:11.96:0,12,97
chr10	5470375	.	A	AC	215.98	PASS	AB=0.843;AC=5;AF=0.093;AN=54;BaseQRankSum=7.022;DP=568;FS=2.202;HRun=0;HaplotypeScore=118.4455;InbreedingCoeff=-0.0996;MQ=62.73;MQ0=24;MQRankSum=-3.214;QD=1.69;ReadPosRankSum=1.202;VQSLOD=2.5453;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:23:33.33:0,33,321	0/0:8,0:8:23.53:0,24,194	0/1:48,0:18:5:5,0,127	0/0:36,0:12:19.47:0,19,105	0/0:29,0:29:69.90:0,70,505	0/0:17,0:17:32.68:0,33,226	0/0:22,0:22:57.88:0,58,434	./.	0/0:26,0:24:68.97:0,69,519	0/0:22,0:22:62.45:0,62,517	0/0:14,0:13:30.32:0,30,231	0/0:13,0:13:37.31:0,37,252	0/0:12,0:12:32.72:0,33,246	0/0:19,0:19:51.52:0,52,368	0/0:23,0:22:38.50:0,39,286	0/1:7,7:13:45.09:105,0,45	0/0:17,0:17:16.39:0,16,278	0/0:19,0:18:48.91:0,49,354	0/1:17,3:18:93.67:94,0,100	0/1:22,6:28:94.81:95,0,147	0/0:20,0:19:42.56:0,43,327	0/1:15,3:18:29.92:30,0,96	0/0:15,0:15:36.45:0,36,277	0/0:28,0:28:72.14:0,72,565	0/0:19,0:17:43.08:0,43,236	0/0:17,0:15:41.67:0,42,338	0/0:31,0:31:72.41:0,72,551	0/0:7,0:6:10.07:0,10,56
chr10	5470379	.	A	ACC	1867.44	PASS	AB=0.751;AC=10;AF=0.185;AN=54;BaseQRankSum=6.799;DP=505;FS=9.536;HRun=2;HaplotypeScore=112.9699;InbreedingCoeff=-0.0602;MQ=66.42;MQ0=23;MQRankSum=-5.230;QD=10.32;ReadPosRankSum=5.486;VQSLOD=0.0838;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:21:0.99:7,1,0	0/0:9,0:9:24.02:0,24,278	0/0:43,0:20:27.02:0,27,370	0/0:32,0:11:23.68:0,24,260	0/0:20,0:20:45.02:0,45,531	0/0:13,0:13:30.07:0,30,357	0/0:16,0:16:33.07:0,33,398	./.	0/0:24,0:23:63.18:0,63,778	0/0:24,0:24:57.18:0,57,739	0/0:12,0:11:24.06:0,24,287	0/0:12,0:12:26.93:0,27,285	0/0:9,0:9:20.98:0,21,221	0/0:17,0:17:38.37:0,38,426	0/1:9,14:23:70.03:468,0,70	0/1:8,3:12:61.99:216,0,62	0/0:16,0:16:1.40:0,1,20	0/0:19,0:18:39.10:0,39,478	0/1:10,5:15:61.49:158,0,61	0/1:9,12:24:57.45:412,0,57	0/0:15,0:15:38.77:0,39,442	0/1:3,12:18:26.35:370,0,26	0/0:13,0:13:30.08:0,30,365	0/0:23,0:23:16.97:0,17,565	0/1:8,7:15:65.76:337,0,66	0/1:17,0:15:5.39:18,0,5	0/1:27,0:27:17.95:18,0,18	0/0:5,0:4:3.01:0,3,19
chr10	5471312	.	ACTC	A	5359.43	PASS	AB=0.514;AC=11;AF=0.196;AN=56;BaseQRankSum=14.783;DP=628;FS=0.384;HRun=0;HaplotypeScore=107.5342;InbreedingCoeff=0.8903;MQ=78.30;MQ0=0;MQRankSum=-13.047;QD=45.42;ReadPosRankSum=-1.383;VQSLOD=6.2621;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:87.30:0,87,1964	0/0:15,0:15:45.15:0,45,1014	0/0:20,0:20:60.18:0,60,1182	0/0:20,0:20:51.17:0,51,1116	0/0:25,0:25:75.26:0,75,1727	0/0:22,0:22:66.21:0,66,1477	0/0:32,0:32:90.31:0,90,2075	0/0:22,0:22:63.22:0,63,1435	0/0:13,0:13:39.13:0,39,899	0/0:31,0:31:90.31:0,90,2076	0/0:19,0:19:57.20:0,57,1314	0/0:22,0:22:66.23:0,66,1522	0/0:18,0:18:51.18:0,51,1176	0/0:22,0:22:63.22:0,63,1453	1/1:1,21:22:60.21:1022,60,0	0/1:1,17:18:15.02:815,0,15	0/0:32,0:32:93.31:0,93,2073	0/0:33,0:33:93.32:0,93,2127	1/1:1,10:11:27.09:460,27,0	1/1:1,30:31:87.21:1407,87,0	0/0:27,0:27:75.26:0,75,1729	1/1:0,20:20:60.16:991,60,0	0/0:23,0:23:69.24:0,69,1589	0/0:21,0:21:60.21:0,60,1382	1/1:0,16:16:38.81:664,39,0	0/0:20,0:20:60.21:0,60,1362	0/0:29,0:28:87.30:0,87,1980	0/0:14,0:14:39.13:0,39,899
chr10	5471767	.	T	TTA	6686.36	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=9.659;DP=652;FS=0.760;HRun=0;HaplotypeScore=81.1143;InbreedingCoeff=0.9951;MQ=69.28;MQ0=1;MQRankSum=-4.127;QD=51.83;ReadPosRankSum=1.237;VQSLOD=5.3452;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,102,1517	0/0:7,0:7:21.07:0,21,318	0/0:30,0:30:90.30:0,90,1342	0/0:33,0:33:46.33:0,46,1234	0/0:24,0:24:69.22:0,69,1034	0/0:27,0:27:78.25:0,78,1155	0/0:18,0:18:48.15:0,48,714	0/0:35,0:35:99:0,102,1525	0/0:21,0:21:63.19:0,63,924	0/0:30,0:31:90.30:0,90,1348	0/0:11,0:11:27.09:0,27,413	0/0:22,0:22:66.22:0,66,991	0/0:18,0:18:51.17:0,51,779	0/0:25,0:25:75.24:0,75,1120	1/1:0,19:19:51.17:984,51,0	1/1:2,19:21:14.27:1050,14,0	0/0:23,0:23:66.21:0,66,990	0/0:12,0:12:33.03:0,33,477	1/1:0,13:13:36.09:626,36,0	1/1:0,33:33:99:1870,99,0	0/0:30,0:30:87.25:0,87,1265	1/1:2,20:23:60.16:1114,60,0	0/0:31,0:31:90.28:0,90,1334	0/0:21,0:21:63.21:0,63,964	1/1:0,19:19:54.19:1042,54,0	0/0:28,0:28:84.28:0,84,1268	0/0:25,0:24:72.22:0,72,1058	0/0:17,0:17:51.16:0,51,760
chr10	5472406	.	A	AC	4213.31	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=14.980;DP=682;FS=9.382;HRun=2;HaplotypeScore=79.8596;InbreedingCoeff=0.9974;MQ=71.36;MQ0=0;MQRankSum=-3.390;QD=34.82;ReadPosRankSum=-0.481;VQSLOD=4.5166;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,132,1846	0/0:6,0:6:18.06:0,18,250	0/0:21,0:21:60.15:0,60,791	0/0:32,0:32:93.08:0,93,1238	0/0:20,0:20:60.18:0,60,816	0/0:27,0:27:81.26:0,81,1115	0/0:37,0:37:99:0,108,1507	0/0:28,0:28:84.27:0,84,1160	0/0:34,0:34:99:0,99,1365	0/0:23,0:23:66.22:0,66,923	0/0:10,0:10:30.10:0,30,419	0/0:23,0:23:69.23:0,69,964	0/0:23,0:23:69.23:0,69,964	0/0:25,0:25:75.24:0,75,1031	1/1:1,32:33:87.15:1180,87,0	1/1:0,25:25:75.24:1017,75,0	0/0:29,0:29:78.21:0,78,1052	0/0:28,0:28:84.22:0,84,1124	1/1:3,19:20:44.88:635,45,0	1/1:2,17:19:51.15:644,51,0	0/0:35,0:35:99:0,99,1367	1/1:0,6:7:21.06:262,21,0	0/0:13,0:13:39.13:0,39,543	0/0:35,0:35:96.32:0,96,1337	1/1:0,15:15:39.11:476,39,0	0/0:25,0:25:72.20:0,72,985	0/0:26,0:26:78.26:0,78,1090	0/0:15,0:15:45.15:0,45,629
chr10	5472593	.	G	GT	690.91	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=8.249;DP=412;FS=3.111;HRun=1;HaplotypeScore=76.7454;InbreedingCoeff=0.8813;MQ=77.68;MQ0=3;MQRankSum=-2.258;QD=10.97;ReadPosRankSum=1.543;VQSLOD=1.9668;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:55.73:0,56,478	0/0:8,0:8:24.08:0,24,310	0/0:28,0:18:35.86:0,36,408	0/0:33,0:22:24.43:0,24,409	0/0:12,0:12:33.11:0,33,427	0/0:13,0:13:36.12:0,36,467	0/0:11,0:11:30.07:0,30,360	0/0:26,0:26:27.10:0,27,378	0/0:11,0:11:24.08:0,24,310	0/0:23,0:23:54.17:0,54,699	0/0:19,0:19:25.32:0,25,565	0/0:12,0:12:30.08:0,30,370	0/0:7,0:7:15:0,15,187	0/0:10,0:10:24.08:0,24,306	1/1:2,5:6:12.02:116,12,0	1/1:8,8:16:27.50:259,27,0	0/0:18,0:18:45.14:0,45,576	0/0:26,0:26:75.20:0,75,941	1/1:10,4:13:1.77:143,2,0	1/1:6,2:9:14.17:112,14,0	0/0:8,0:8:6.02:0,6,78	1/1:8,7:15:9.75:172,10,0	0/0:12,0:12:33.11:0,33,428	0/0:12,0:12:27.03:0,27,317	1/1:0,2:2:6.01:57,6,0	0/0:21,0:21:60.18:0,60,762	0/0:9,0:9:24.04:0,24,291	0/0:6,0:6:15.05:0,15,193
chr10	5472595	.	C	CT	1646.92	PASS	AB=0.892;AC=19;AF=0.339;AN=56;BaseQRankSum=4.002;DP=460;FS=4.701;HRun=12;HaplotypeScore=82.9882;InbreedingCoeff=0.5744;MQ=75.87;MQ0=7;MQRankSum=-2.243;QD=7.81;ReadPosRankSum=-2.816;VQSLOD=2.2514;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:10,20:30:39.06:380,39,0	0/0:10,0:10:17.85:0,18,131	0/1:32,0:18:0.77:1,0,84	0/1:37,0:23:16.49:16,0,48	0/0:13,0:15:28.79:0,29,199	0/0:13,0:13:32.80:0,33,239	0/0:11,0:11:14.85:0,15,109	0/1:12,13:25:5.05:418,0,5	0/0:16,0:15:17.77:0,18,130	0/0:22,0:22:32.73:0,33,241	0/0:19,0:19:35.74:0,36,261	0/0:11,0:11:26.82:0,27,197	0/1:8,1:9:26.70:27,0,51	0/0:15,0:15:12.64:0,13,89	1/1:7,0:6:15.45:136,15,0	1/1:16,0:16:28.74:259,29,0	0/0:22,0:23:37.55:0,38,259	0/0:28,0:29:52.66:0,53,378	1/1:17,0:16:8.79:155,9,0	1/1:10,0:10:24.95:181,25,0	0/0:6,0:6:2.94:0,3,22	1/1:14,0:14:13.05:196,13,0	0/0:12,0:12:29.78:0,30,217	0/0:17,0:17:7.25:0,7,153	1/1:2,0:2:6.01:58,6,0	0/0:20,0:21:20.59:0,21,303	0/1:9,1:10:11.30:11,0,92	0/0:9,0:9:8.88:0,9,66
chr10	5472617	.	AT	A	533.56	PASS	AB=0.724;AC=16;AF=0.286;AN=56;BaseQRankSum=6.376;DP=451;FS=17.978;HRun=13;HaplotypeScore=74.7500;InbreedingCoeff=0.4247;MQ=74.61;MQ0=10;MQRankSum=-2.549;QD=4.01;ReadPosRankSum=-0.154;VQSLOD=-0.1214;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,1:30:41.10:0,41,535	0/0:9,0:11:17.03:0,17,183	0/0:42,1:21:14.10:0,14,128	0/0:38,1:22:5.42:0,5,112	0/0:15,0:15:23.85:0,24,208	0/0:14,0:14:29.88:0,30,277	0/0:6,0:8:17.86:0,18,160	1/1:10,14:24:15.55:263,16,0	0/0:15,0:14:9.05:0,9,175	0/0:21,0:21:30.05:0,30,292	0/0:17,0:18:32.66:0,33,288	0/0:13,0:13:26.95:0,27,243	0/0:9,0:9:15.02:0,15,146	0/0:11,0:11:21.03:0,21,200	0/1:5,4:8:31.79:32,0,41	0/1:6,5:11:11.35:91,0,11	0/0:7,0:21:40.07:0,40,217	0/0:24,0:25:53.80:0,54,489	0/1:9,7:16:11.33:91,0,11	0/1:5,2:7:27.95:28,0,43	0/0:3,0:5:8.80:0,9,63	1/1:7,2:9:11.27:73,11,0	0/1:12,2:15:8.01:8,0,228	0/0:11,0:16:25.85:0,26,256	1/1:1,2:3:5.94:44,6,0	0/1:7,0:17:4.94:31,0,5	1/1:7,0:12:7.76:23,8,0	1/1:3,0:8:8.14:24,8,0
chr10	5472695	.	A	AGC	2595.70	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=10.499;DP=448;FS=3.099;HRun=0;HaplotypeScore=67.8659;InbreedingCoeff=0.9708;MQ=70.82;MQ0=5;MQRankSum=-0.493;QD=31.27;ReadPosRankSum=2.815;VQSLOD=5.1451;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,102,1594	0/0:3,0:3:9.03:0,9,141	0/0:32,0:19:52.58:0,53,566	0/0:26,0:15:19.82:0,20,227	0/0:18,0:18:51.17:0,51,832	0/0:13,0:13:39.13:0,39,635	0/0:10,0:10:30.10:0,30,484	0/0:25,0:20:57.18:0,57,905	0/0:14,0:14:42.14:0,42,680	0/0:15,0:14:39.13:0,39,635	0/0:12,0:12:36.12:0,36,585	0/0:10,0:10:30.09:0,30,463	0/0:14,0:14:39.13:0,39,628	0/0:13,0:13:39.13:0,39,619	1/1:0,9:9:27.09:420,27,0	1/1:1,11:12:25.35:424,25,0	0/0:17,0:16:48.16:0,48,774	0/0:23,0:23:66.22:0,66,1044	1/1:2,1:11:17.36:153,17,0	1/1:1,13:14:30.10:465,30,0	0/0:6,0:6:18.06:0,18,293	1/1:0,16:17:42.14:665,42,0	0/0:22,0:22:60.20:0,60,977	0/0:3,0:3:8.99:0,9,118	1/1:1,17:17:45.07:655,45,0	0/0:19,0:19:57.19:0,57,924	0/0:22,0:22:60.19:0,60,953	0/0:8,0:8:24.08:0,24,388
chr10	5474498	.	CACAA	C	11337.94	PASS	AB=0.530;AC=22;AF=0.393;AN=56;BaseQRankSum=16.653;DP=709;FS=10.011;HRun=0;HaplotypeScore=120.7426;InbreedingCoeff=0.8413;MQ=53.80;MQ0=1;MQRankSum=-8.198;QD=39.23;ReadPosRankSum=4.479;VQSLOD=4.4729;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,39:41:90.31:1617,90,0	0/0:16,0:16:48.16:0,48,1228	0/0:24,0:16:39.13:0,39,942	0/0:16,0:15:39.13:0,39,982	0/0:26,0:26:72.25:0,72,1843	0/0:25,2:25:69.15:0,69,1675	0/0:32,0:32:93.23:0,93,2225	1/1:3,18:19:48.16:854,48,0	0/0:24,5:27:69.19:0,69,1734	0/0:27,0:27:54.09:0,54,1846	0/0:25,1:26:63.22:0,63,1637	0/0:22,1:23:9.34:0,9,1373	0/0:27,1:27:75.24:0,75,1880	0/0:24,3:27:63.22:0,63,1627	1/1:2,28:29:75.26:1346,75,0	0/1:3,25:28:17.78:964,0,18	1/1:3,24:26:45.15:809,45,0	0/0:20,0:20:57.20:0,57,1441	1/1:1,10:11:24.08:431,24,0	1/1:0,28:28:60.21:1078,60,0	0/0:36,0:36:99:0,102,2577	1/1:1,18:19:48.16:862,48,0	0/0:25,0:25:66.23:0,66,1693	0/0:36,2:36:99:0,105,2623	1/1:2,13:15:30.10:539,30,0	0/1:4,29:33:62.68:1436,0,63	1/1:1,28:27:63.22:1132,63,0	1/1:0,6:6:15.05:270,15,0
chr10	5475505	.	C	CTT	4259.81	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=10.012;DP=615;FS=0.452;HRun=1;HaplotypeScore=81.6549;InbreedingCoeff=0.9988;MQ=71.45;MQ0=1;MQRankSum=-4.947;QD=48.96;ReadPosRankSum=-0.605;VQSLOD=4.5313;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,120,1922	0/0:7,0:7:21.06:0,21,314	0/0:21,0:21:63.19:0,63,961	0/0:23,0:22:59.18:0,59,912	0/0:20,0:20:60.17:0,60,921	0/0:16,0:16:48.13:0,48,732	0/0:26,0:26:78.25:0,78,1240	0/0:33,0:33:96.31:0,96,1501	0/0:21,0:21:63.18:0,63,973	0/0:27,0:27:78.24:0,78,1181	0/0:13,0:13:39.13:0,39,631	0/0:25,0:25:75.23:0,75,1170	0/0:15,0:15:45.15:0,45,729	0/0:21,0:21:63.22:0,63,1024	0/0:22,0:22:66.18:0,66,999	1/1:3,17:19:57.20:1140,57,0	0/0:29,0:29:84.29:0,84,1362	0/0:12,0:12:36.11:0,36,562	1/1:0,22:17:51.17:1020,51,0	1/1:3,14:16:42.06:757,42,0	0/0:31,0:31:93.28:0,93,1466	1/1:1,26:28:69.19:1344,69,0	0/0:19,0:19:57.18:0,57,896	0/0:23,0:23:69.22:0,69,1100	0/0:24,0:24:72.23:0,72,1147	0/0:23,0:23:69.22:0,69,1098	0/0:25,0:25:75.23:0,75,1168	0/0:12,0:12:36.12:0,36,587
chr10	5475535	.	AC	A	1709.98	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=10.625;DP=584;FS=1.096;HRun=5;HaplotypeScore=65.8289;InbreedingCoeff=0.9708;MQ=79.04;MQ0=1;MQRankSum=-8.727;QD=25.15;ReadPosRankSum=0.439;VQSLOD=2.7661;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,120,1641	0/0:2,0:2:6.02:0,6,82	0/0:20,0:20:60.18:0,60,787	0/0:21,0:21:53.94:0,54,679	0/0:23,0:23:63.20:0,63,844	0/0:18,0:18:54.18:0,54,737	0/0:22,0:22:57.19:0,57,780	0/0:30,0:30:84.27:0,84,1133	0/0:19,0:19:57.19:0,57,778	0/0:25,0:25:72.24:0,72,984	0/0:10,0:10:30.10:0,30,408	0/0:23,0:23:63.20:0,63,846	0/0:14,0:14:39.13:0,39,533	0/0:24,0:24:72.24:0,72,982	0/0:30,0:30:90.30:0,90,1230	1/1:1,17:17:42.12:476,42,0	0/0:40,0:40:99:0,114,1559	0/0:12,0:12:30.10:0,30,410	1/1:3,17:19:51.15:578,51,0	1/1:2,16:17:42.12:476,42,0	0/0:27,0:27:75.25:0,75,1024	1/1:2,10:12:30.08:340,30,0	0/0:14,0:14:39.13:0,39,533	0/0:27,0:27:75.24:0,75,1011	0/0:19,0:19:48.16:0,48,656	0/0:18,0:18:45.15:0,45,616	0/0:25,0:25:69.23:0,69,944	0/0:10,0:10:30.10:0,30,410
chr10	5476155	.	GGACGA	G	2436.55	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.545;DP=533;FS=0.000;HRun=0;HaplotypeScore=107.4245;InbreedingCoeff=0.9799;MQ=74.68;MQ0=0;MQRankSum=-3.075;QD=56.66;ReadPosRankSum=3.661;VQSLOD=3.8286;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:75.26:0,75,2369	0/0:6,0:6:12.04:0,12,388	0/0:20,0:20:51.12:0,51,1190	0/0:22,0:22:66.23:0,66,2050	0/0:9,0:9:27.06:0,27,727	0/0:23,0:23:63.22:0,63,1994	0/0:26,0:26:78.27:0,78,2454	0/0:22,0:22:60.19:0,60,1689	0/0:22,0:22:57.20:0,57,1838	0/0:19,0:19:57.19:0,57,1651	0/0:13,0:13:39.13:0,39,1250	0/0:18,0:18:54.19:0,54,1700	0/0:13,0:13:27.08:0,27,796	0/0:18,0:18:51.16:0,51,1489	1/1:0,30:30:84.23:1823,84,0	0/0:22,0:22:66.23:0,66,2036	0/0:37,0:37:99:0,111,3335	0/0:25,0:25:69.24:0,69,2218	0/0:14,0:14:39.12:0,39,1118	0/0:16,0:16:33.11:0,33,1035	0/0:26,0:26:75.26:0,75,2372	0/0:9,0:9:24.07:0,24,696	0/0:13,0:13:36.06:0,36,1013	0/0:24,0:24:69.24:0,69,2225	1/1:0,13:13:33.06:735,33,0	0/0:19,0:19:57.17:0,57,1581	0/0:20,0:20:51.65:0,52,1647	0/0:7,0:7:21.07:0,21,678
chr10	5476424	.	G	GAGGGATCTGTTTGGTTTTAC	18498.16	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=1.843;DP=701;FS=2.642;HRun=0;HaplotypeScore=347.9405;InbreedingCoeff=0.9998;MQ=74.59;MQ0=0;MQRankSum=-14.018;QD=186.85;ReadPosRankSum=1.540;VQSLOD=4.4877;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,111,5611	0/0:14,0:14:42.14:0,42,2043	0/0:33,0:33:84.29:0,84,3995	0/0:27,0:27:75.20:0,75,2985	0/0:28,0:28:78.21:0,78,3547	0/0:32,0:32:90.30:0,90,4607	0/0:26,0:26:78.25:0,78,3681	0/0:33,0:33:90.29:0,90,4277	0/0:24,0:24:66.21:0,66,3204	0/0:30,0:30:75.26:0,75,3932	0/0:18,0:18:45.15:0,45,2233	0/0:25,0:25:72.25:0,72,3886	0/0:28,0:28:81.26:0,81,4061	0/0:17,0:17:51.16:0,51,2506	0/0:21,0:21:63.21:0,63,3211	1/1:13,12:27:69.24:5721,69,0	0/0:25,0:25:69.20:0,69,3204	0/0:15,0:15:36.12:0,36,1892	1/1:16,2:17:36.12:2764,36,0	1/1:19,11:32:81.28:6599,81,0	0/0:29,0:29:84.27:0,84,4025	1/1:11,6:21:48.16:3415,48,0	0/0:26,0:26:72.25:0,72,3891	0/0:22,0:22:60.19:0,60,3035	0/0:24,0:24:69.22:0,69,3400	0/0:22,0:22:60.15:0,60,3025	0/0:35,0:35:99:0,105,5256	0/0:11,0:11:30.10:0,30,1686
chr10	5476546	.	TTGTTTGGCCTGCTCATATTAC	T	4392.96	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.388;DP=688;FS=1.633;HRun=0;HaplotypeScore=371.4368;InbreedingCoeff=0.9955;MQ=65.50;MQ0=0;MQRankSum=-7.747;QD=115.60;ReadPosRankSum=2.471;VQSLOD=3.8822;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:60,0:60:99:0,178,15795	0/0:7,0:7:21.07:0,21,1984	0/0:22,0:21:54.18:0,54,3126	0/0:32,0:31:83.30:0,83,5594	0/0:34,0:34:99:0,99,7747	0/0:31,0:31:93.32:0,93,8467	0/0:26,0:26:72.25:0,72,6533	0/0:27,0:27:69.24:0,69,5311	0/0:22,0:22:63.22:0,63,5146	0/0:31,0:31:84.29:0,84,7728	0/0:24,0:24:69.24:0,69,6508	0/0:25,0:25:72.25:0,72,6495	0/0:23,0:23:69.24:0,69,6299	0/0:17,0:17:48.15:0,48,3831	1/1:3,21:24:54.19:3163,54,0	0/0:21,0:21:63.20:0,63,5411	0/0:26,0:26:72.25:0,72,7015	0/0:20,0:20:57.20:0,57,5114	0/0:18,0:16:42.14:0,42,2981	0/0:23,0:23:66.23:0,66,6235	0/0:21,0:21:60.21:0,60,5119	0/0:21,0:21:60.16:0,60,5425	0/0:24,0:24:66.22:0,66,5821	0/0:19,0:19:57.20:0,57,5588	1/1:6,8:13:21.07:1230,21,0	0/0:32,0:32:96.32:0,96,8710	0/0:29,0:29:84.29:0,84,7561	0/0:15,0:15:30.10:0,30,2764
chr10	5476769	.	CCTGCAAGGGGTGTGAGACAAGGTA	C	5049.02	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=9.139;DP=671;FS=1.495;HRun=0;HaplotypeScore=405.6500;InbreedingCoeff=0.9873;MQ=84.61;MQ0=0;MQRankSum=-7.375;QD=80.14;ReadPosRankSum=3.021;VQSLOD=3.3842;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,102,10112	0/0:18,0:18:45.15:0,45,4805	0/0:34,0:34:60.20:0,60,3504	0/0:28,0:28:63.22:0,63,3936	0/0:29,0:29:78.27:0,78,7875	0/0:33,0:33:84.26:0,84,8128	0/0:20,0:20:45.14:0,45,3963	0/0:36,0:36:84.27:0,84,6017	0/0:22,0:22:63.22:0,63,6665	0/0:25,0:25:57.17:0,57,5488	0/0:17,0:17:42.14:0,42,3162	0/0:18,0:18:48.15:0,48,4515	0/0:20,0:20:60.21:0,60,5835	0/0:23,0:23:66.23:0,66,6338	0/0:26,0:26:78.27:0,78,7659	1/1:3,14:17:33.11:2107,33,0	0/0:37,0:37:99:0,99,10461	0/0:10,0:10:27.09:0,27,2563	1/1:7,6:12:18.05:716,18,0	1/1:4,7:10:12.04:769,12,0	0/0:35,0:35:96.31:0,96,9198	1/1:11,11:22:27.09:1457,27,0	0/0:24,0:24:69.24:0,69,7038	0/0:27,0:27:72.25:0,72,7323	0/0:21,0:21:54.19:0,54,5596	0/0:23,0:23:69.23:0,69,6692	0/0:34,0:34:90.31:0,90,8724	0/0:7,0:7:21.07:0,21,2300
chr10	5477341	.	C	CTGCAACT	701.45	PASS	AC=2;AF=0.042;AN=48;BaseQRankSum=1.739;DP=444;FS=2.941;HRun=0;HaplotypeScore=117.6130;InbreedingCoeff=0.6757;MQ=56.27;MQ0=15;MQRankSum=-4.041;QD=33.40;ReadPosRankSum=-1.771;VQSLOD=3.3662;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:13,8:17:26.96:794,27,0	0/0:5,0:5:9.03:0,9,221	0/0:14,0:4:6.02:0,6,146	0/0:13,0:7:5.37:0,5,106	0/0:19,0:19:45.14:0,45,1053	0/0:15,0:15:45.14:0,45,1053	0/0:15,0:15:36.05:0,36,777	0/0:17,0:15:39.13:0,39,941	0/0:22,0:22:57.16:0,57,1220	0/0:16,0:16:36.12:0,36,882	0/0:16,0:16:42.13:0,42,959	0/0:17,0:17:45.15:0,45,1103	0/0:16,0:16:42.14:0,42,1029	0/0:18,0:18:45.10:0,45,1026	0/0:16,0:16:30.10:0,30,708	./.	0/0:36,0:35:99:0,99,2427	0/0:27,0:27:69.24:0,69,1691	./.	./.	0/0:56,0:56:99:0,153,3608	./.	0/0:13,0:13:30.09:0,30,688	0/0:21,0:21:57.09:0,57,1241	0/0:14,0:14:30.05:0,30,613	0/0:17,0:17:51.17:0,51,1190	0/0:19,0:17:45.63:0,46,1103	0/0:1,0:1:3.01:0,3,74
chr10	5477373	.	A	AAAGAAC	1666.99	PASS	AC=4;AF=0.083;AN=48;BaseQRankSum=-2.359;DP=489;FS=12.983;HRun=0;HaplotypeScore=117.5746;InbreedingCoeff=0.9500;MQ=55.69;MQ0=13;MQRankSum=-6.701;QD=61.74;ReadPosRankSum=-0.957;VQSLOD=2.7930;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:20:30.10:0,30,673	0/0:5,0:5:12.04:0,12,270	0/0:22,0:9:24:0,24,444	0/0:17,0:12:30.10:0,30,606	0/0:19,0:19:45.15:0,45,1010	0/0:17,0:17:33.07:0,33,686	0/0:18,0:18:54.19:0,54,1178	0/0:19,0:17:36.10:0,36,744	0/0:21,0:21:57.20:0,57,1256	0/0:13,0:13:33.11:0,33,673	0/0:10,0:10:30.10:0,30,607	0/0:20,0:20:51.17:0,51,1123	0/0:18,0:18:42.14:0,42,920	0/0:23,0:23:60.20:0,60,1277	1/1:7,12:18:33.11:1122,33,0	./.	0/0:45,0:44:99:0,132,2917	0/0:25,0:25:72.25:0,72,1606	./.	./.	0/0:64,0:64:99:0,184,4040	./.	0/0:12,0:12:24.07:0,24,496	0/0:23,0:23:60.20:0,60,1305	1/1:1,7:8:21.07:663,21,0	0/0:24,0:24:66.23:0,66,1460	0/0:21,0:19:42.10:0,42,862	0/0:3,0:3:9.03:0,9,202
chr10	5477396	.	CG	C	491.41	PASS	AC=4;AF=0.083;AN=48;BaseQRankSum=7.596;DP=487;FS=31.034;HRun=2;HaplotypeScore=71.3765;InbreedingCoeff=0.9594;MQ=68.77;MQ0=1;MQRankSum=-6.316;QD=14.45;ReadPosRankSum=-1.775;VQSLOD=1.2268;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,14:17:32.34:263,32,0	0/0:7,0:7:21.06:0,21,293	0/0:16,0:14:39.13:0,39,578	0/0:19,0:18:46.69:0,47,610	0/0:14,0:14:42.13:0,42,609	0/0:15,0:15:45.15:0,45,674	0/0:30,0:30:87.28:0,87,1280	1/1:2,14:16:20.02:346,20,0	0/0:23,0:23:66.22:0,66,987	0/0:15,0:15:45.15:0,45,674	0/0:7,0:7:21.07:0,21,314	0/0:20,0:20:54.13:0,54,761	0/0:20,0:20:57.18:0,57,834	0/0:21,0:21:63.21:0,63,937	0/0:18,0:17:48.12:0,48,691	./.	0/0:49,0:48:99:0,144,2157	0/0:25,0:25:72.23:0,72,1057	./.	./.	0/0:66,0:66:99:0,199,2922	./.	0/0:11,0:11:33.11:0,33,494	0/0:25,0:25:72.19:0,72,1032	0/0:8,0:8:18.05:0,18,249	0/0:22,0:22:66.22:0,66,969	0/0:18,0:17:48.16:0,48,717	0/0:3,0:3:9.03:0,9,135
chr10	5477399	.	TGATGA	T	996.60	PASS	AC=4;AF=0.083;AN=48;BaseQRankSum=7.825;DP=477;FS=31.565;HRun=0;HaplotypeScore=110.1337;InbreedingCoeff=0.9597;MQ=71.05;MQ0=0;MQRankSum=-6.218;QD=34.37;ReadPosRankSum=-1.861;VQSLOD=1.4914;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,14:15:32.85:534,33,0	0/0:7,0:7:21.07:0,21,649	0/0:15,0:14:39.08:0,39,1049	0/0:21,0:20:27.41:0,27,1309	0/0:14,0:14:42.14:0,42,1294	0/0:15,0:15:45.15:0,45,1426	0/0:27,0:27:78.27:0,78,2464	1/1:3,10:13:35.61:582,36,0	0/0:23,0:23:63.22:0,63,1963	0/0:15,0:15:45.15:0,45,1419	0/0:7,0:7:18.06:0,18,521	0/0:19,0:19:51.18:0,51,1594	0/0:21,0:21:60.21:0,60,1880	0/0:22,0:22:66.23:0,66,2018	0/0:18,0:17:48.16:0,48,1491	./.	0/0:50,0:49:99:0,141,4269	0/0:23,0:23:66.23:0,66,2042	./.	./.	0/0:66,0:66:99:0,196,6098	./.	0/0:11,0:11:33.11:0,33,1007	0/0:26,0:26:72.25:0,72,2191	0/0:7,0:7:18.06:0,18,560	0/0:21,0:21:63.22:0,63,1892	0/0:16,0:15:48.16:0,48,1520	0/0:3,0:3:9.03:0,9,285
chr10	5477773	.	A	ACAAAG	2973.83	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-6.792;DP=403;FS=9.156;HRun=0;HaplotypeScore=74.9243;InbreedingCoeff=0.9740;MQ=87.67;MQ0=0;MQRankSum=-2.125;QD=67.59;ReadPosRankSum=-0.419;VQSLOD=4.4552;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:69.14:0,69,1273	0/0:4,0:4:12.04:0,12,228	0/0:12,0:12:21.03:0,21,319	0/0:24,0:24:45.88:0,46,710	0/0:14,0:14:39.12:0,39,724	0/0:20,0:20:54.19:0,54,1057	0/0:17,0:17:45.11:0,45,769	0/0:24,0:24:54.18:0,54,997	0/0:14,0:14:36.12:0,36,714	0/0:12,0:12:30.10:0,30,595	0/0:11,0:11:33.10:0,33,620	0/0:16,0:16:45.15:0,45,888	0/0:9,0:9:27.09:0,27,536	0/0:16,0:16:48.16:0,48,953	0/0:12,0:12:30.09:0,30,561	1/1:1,9:10:27.09:806,27,0	0/0:17,0:17:45.15:0,45,891	0/0:21,0:21:45.11:0,45,807	1/1:3,6:9:15.05:407,15,0	1/1:1,7:8:18.06:496,18,0	0/0:15,0:15:45.15:0,45,891	1/1:1,16:17:51.18:1423,51,0	0/0:15,0:15:36.12:0,36,715	0/0:5,0:5:12.04:0,12,238	0/0:12,0:12:30.03:0,30,554	0/0:18,0:18:51.13:0,51,973	0/0:16,0:15:48.16:0,48,944	0/0:12,0:12:36.12:0,36,713
chr10	5478177	.	TAAAAA	T	4289.99	PASS	AB=0.719;AC=8;AF=0.143;AN=56;BaseQRankSum=11.230;DP=602;FS=0.000;HRun=5;HaplotypeScore=112.4968;InbreedingCoeff=0.7077;MQ=80.24;MQ0=0;MQRankSum=-7.252;QD=46.63;ReadPosRankSum=1.721;VQSLOD=1.7478;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:96.31:0,96,3025	0/0:11,0:11:33.11:0,33,1080	0/0:21,0:22:55.85:0,56,1519	0/0:11,0:11:30.09:0,30,803	0/0:29,0:29:87.30:0,87,2854	0/0:26,0:26:78.27:0,78,2462	0/0:23,0:22:69.24:0,69,2248	0/0:35,0:35:99:0,105,3040	0/1:12,1:13:29.69:30,0,1152	0/0:38,0:38:99:0,114,3576	0/0:22,0:22:66.23:0,66,2156	0/0:15,0:15:45.15:0,45,1476	0/0:12,0:12:36.12:0,36,1106	0/0:12,0:12:36.12:0,36,1200	0/0:27,0:27:78.27:0,78,2488	0/1:1,25:26:27.74:1510,0,28	0/0:14,0:14:39.13:0,39,1298	0/0:32,0:32:93.32:0,93,3005	1/1:0,15:13:27.09:619,27,0	1/1:0,14:14:36.12:825,36,0	0/0:8,0:8:24.08:0,24,727	1/1:0,24:24:57.20:1305,57,0	0/0:29,0:29:87.30:0,87,2860	0/0:20,0:20:60.21:0,60,1913	0/0:19,0:19:57.20:0,57,1809	0/0:29,0:29:87.30:0,87,2741	0/0:27,0:26:81.28:0,81,2585	0/0:16,0:16:48.16:0,48,1443
chr10	5478531	.	C	CT	2849.15	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-9.614;DP=769;FS=6.782;HRun=7;HaplotypeScore=78.7358;InbreedingCoeff=0.9998;MQ=89.77;MQ0=0;MQRankSum=-1.787;QD=27.13;ReadPosRankSum=-0.436;VQSLOD=4.0301;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,99,952	0/0:16,0:16:45.06:0,45,430	0/0:30,0:31:61.23:0,61,610	0/0:28,0:29:58.14:0,58,517	0/0:29,0:29:81.09:0,81,767	0/0:20,0:20:57.08:0,57,546	0/0:16,0:16:45.03:0,45,417	0/0:43,0:43:99:0,99,938	0/0:33,0:33:87.13:0,87,840	0/0:29,0:29:78.11:0,78,750	0/0:30,0:30:71.73:0,72,660	0/0:30,0:30:87.11:0,87,829	0/0:23,0:23:60.09:0,60,579	0/0:23,0:23:63.06:0,63,592	0/0:31,0:31:87.14:0,87,840	1/1:6,20:26:31.21:660,31,0	0/0:37,0:37:99:0,99,930	0/0:20,0:20:54.05:0,54,510	1/1:6,27:33:84.22:986,84,0	1/1:1,20:21:57.09:656,57,0	0/0:29,0:29:84.14:0,84,811	1/1:3,22:25:60.14:708,60,0	0/0:31,0:31:78.09:0,78,741	0/0:32,0:32:87.12:0,87,835	0/0:14,0:14:39.06:0,39,377	0/0:36,0:36:93.14:0,93,898	0/0:30,0:30:75.10:0,75,717	0/0:12,0:12:33.05:0,33,319
chr10	5479894	.	G	GTTT	1538.85	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-7.791;DP=426;FS=0.000;HRun=7;HaplotypeScore=60.9308;InbreedingCoeff=0.8055;MQ=74.75;MQ0=0;MQRankSum=-2.705;QD=42.75;ReadPosRankSum=-4.380;VQSLOD=2.2911;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:93.30:0,93,1267	0/0:4,0:4:9.02:0,9,123	0/0:12,0:12:36.09:0,36,449	0/0:7,0:7:4.46:0,4,148	0/0:6,0:6:15.04:0,15,205	0/0:12,0:12:27.07:0,27,369	0/0:23,0:23:63.16:0,63,827	1/1:8,26:36:84.26:1634,84,0	0/0:20,0:20:45.10:0,45,596	0/0:8,0:8:18.05:0,18,232	0/0:10,0:10:27.08:0,27,369	0/0:8,0:8:21.07:0,21,287	0/0:17,0:17:48.11:0,48,631	0/0:10,0:10:24.06:0,24,327	0/0:14,0:14:36.12:0,36,491	0/0:14,0:14:39.12:0,39,532	0/0:24,0:24:69.20:0,69,921	0/0:23,0:23:60.14:0,60,794	0/0:12,0:12:36.12:0,36,489	0/0:7,0:7:17.87:0,18,202	0/0:18,0:18:51.15:0,51,679	0/0:15,0:15:42.14:0,42,573	0/0:15,0:15:36.10:0,36,475	0/0:11,0:11:27.06:0,27,349	0/0:17,0:17:51.14:0,51,662	0/0:24,0:24:69.23:0,69,942	0/0:16,0:16:48.16:0,48,654	0/0:10,0:10:30.10:0,30,409
chr10	5480447	.	T	TGG	1463.15	PASS	AB=0.898;AC=12;AF=0.214;AN=56;BaseQRankSum=6.774;DP=555;FS=15.968;HRun=0;HaplotypeScore=109.1035;InbreedingCoeff=-0.1243;MQ=43.28;MQ0=23;MQRankSum=-5.130;QD=7.28;ReadPosRankSum=2.535;VQSLOD=2.4076;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:15,3:16:59.79:136,0,60	0/0:11,0:11:27.97:0,28,400	0/0:34,0:1:1.25:0,1,3	0/0:36,0:10:7.36:0,7,86	0/0:24,0:24:31.82:0,32,588	0/0:19,0:19:46.17:0,46,620	0/0:28,0:27:71.98:0,72,928	0/1:36,0:34:99:236,0,317	0/0:20,0:20:47.97:0,48,598	0/0:32,0:31:76.44:0,76,977	0/0:23,0:23:40.10:0,40,475	0/0:22,0:22:54.39:0,54,716	0/0:7,0:7:12.41:0,12,125	0/0:16,0:15:35.53:0,36,395	0/1:12,7:19:68.69:370,0,69	0/1:8,0:8:27.42:27,0,32	0/1:25,0:24:8.84:9,0,130	0/0:27,0:26:58.99:0,59,724	0/1:12,2:14:92.64:185,0,93	0/1:6,3:9:70.35:108,0,70	0/0:15,0:15:16.72:0,17,211	0/0:1,0:1:3:0,3,29	0/0:21,0:20:52.26:0,52,575	0/0:18,0:17:34.29:0,34,384	0/1:13,1:13:88.58:108,0,89	0/1:25,5:26:99:356,0,160	1/1:14,0:10:2.12:51,2,0	0/1:13,0:11:21.79:22,0,66
chr10	5480597	.	C	CAG	7865.84	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-0.192;DP=523;FS=42.456;HRun=0;HaplotypeScore=81.9783;InbreedingCoeff=0.9940;MQ=69.09;MQ0=0;MQRankSum=-3.570;QD=47.67;ReadPosRankSum=-1.013;VQSLOD=2.3490;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,24:31:72.15:1294,72,0	0/0:13,0:13:36.12:0,36,551	0/0:23,0:23:51.03:0,51,654	0/0:17,0:17:47.79:0,48,614	0/0:19,0:19:57.18:0,57,848	0/0:16,0:16:48.15:0,48,712	0/0:21,0:21:57.19:0,57,853	1/1:1,20:22:66.11:1061,66,0	0/0:27,0:27:78.23:0,78,1148	0/0:24,0:24:69.23:0,69,1039	0/0:12,0:12:33.11:0,33,505	0/0:22,0:22:63.20:0,63,923	0/0:12,0:12:36.12:0,36,550	0/0:16,0:16:48.16:0,48,734	1/1:2,14:16:45.14:827,45,0	1/1:0,6:6:18.06:344,18,0	0/0:31,0:30:90.31:0,90,1372	0/0:22,0:22:51.17:0,51,780	1/1:3,11:15:39.13:690,39,0	1/1:5,15:20:54.08:955,54,0	0/0:36,0:36:99:0,99,1453	1/1:0,7:7:15.05:287,15,0	0/0:27,0:27:78.23:0,78,1133	0/0:20,0:20:54.17:0,54,807	1/1:2,8:10:27.09:517,27,0	1/1:4,17:20:54.18:1026,54,0	1/1:3,9:12:33.10:579,33,0	1/1:0,5:5:15.05:287,15,0
chr10	5480652	.	TAAG	T	9027.38	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=13.645;DP=576;FS=3.366;HRun=0;HaplotypeScore=97.1109;InbreedingCoeff=0.9946;MQ=85.05;MQ0=0;MQRankSum=-9.047;QD=48.02;ReadPosRankSum=-0.773;VQSLOD=6.5994;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,32:36:96.27:1656,96,0	0/0:10,0:10:30.07:0,30,634	0/0:22,0:22:66.21:0,66,1314	0/0:27,0:27:81.19:0,81,1706	0/0:17,0:17:51.13:0,51,1105	0/0:15,0:15:45.15:0,45,1058	0/0:23,0:23:69.21:0,69,1599	1/1:0,21:21:63.22:1169,63,0	0/0:27,0:27:81.23:0,81,1890	0/0:33,0:33:96.29:0,96,2070	0/0:12,0:12:33.08:0,33,665	0/0:30,0:30:90.28:0,90,2089	0/0:27,0:27:81.22:0,81,1862	0/0:19,0:19:57.14:0,57,1301	1/1:0,20:20:60.21:1112,60,0	1/1:2,10:12:36.10:607,36,0	0/0:30,0:30:87.26:0,87,2014	0/0:20,0:20:54.19:0,54,1320	1/1:1,19:20:57.06:898,57,0	1/1:1,16:17:42.02:671,42,0	0/0:36,0:36:99:0,105,2458	1/1:0,12:12:24.04:407,24,0	0/0:19,0:19:51.14:0,51,1136	0/0:21,0:21:63.22:0,63,1552	1/1:1,6:7:21.06:357,21,0	1/1:2,19:21:63.13:1098,63,0	1/1:0,17:16:45.15:832,45,0	1/1:0,5:5:12.04:222,12,0
chr10	5481252	.	TG	T	800.89	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.228;DP=653;FS=8.463;HRun=2;HaplotypeScore=72.8156;InbreedingCoeff=0.9949;MQ=82.78;MQ0=0;MQRankSum=-4.506;QD=28.60;ReadPosRankSum=0.285;VQSLOD=2.4365;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:75.25:0,75,1123	0/0:7,0:7:21.07:0,21,310	0/0:20,0:20:60.14:0,60,853	0/0:30,0:30:87.23:0,87,1228	0/0:18,0:18:54.18:0,54,809	0/0:21,0:21:63.21:0,63,941	0/0:30,0:30:90.30:0,90,1348	0/0:42,0:42:99:0,126,1818	0/0:23,0:23:69.23:0,69,1033	0/0:26,0:26:75.25:0,75,1124	0/0:20,0:20:60.19:0,60,879	0/0:19,0:19:57.19:0,57,854	0/0:31,0:31:93.30:0,93,1374	0/0:18,0:18:54.17:0,54,788	0/0:13,0:13:39.13:0,39,583	0/0:24,0:24:72.24:0,72,1079	1/1:0,28:28:69.22:896,69,0	0/0:28,0:28:81.27:0,81,1212	0/0:18,0:18:54.18:0,54,809	0/0:26,0:26:78.26:0,78,1168	0/0:37,0:37:99:0,105,1571	0/0:17,0:17:51.17:0,51,761	0/0:19,0:19:57.19:0,57,850	0/0:25,0:25:75.24:0,75,1104	0/0:17,0:17:51.16:0,51,747	0/0:32,0:32:93.31:0,93,1382	0/0:30,0:30:90.30:0,90,1349	0/0:9,0:9:27.09:0,27,405
chr10	5482032	.	CA	C	5676.64	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=8.857;DP=633;FS=10.254;HRun=3;HaplotypeScore=66.4160;InbreedingCoeff=0.9998;MQ=86.81;MQ0=0;MQRankSum=-0.336;QD=33.39;ReadPosRankSum=-0.582;VQSLOD=4.5081;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,108,1534	0/0:15,0:15:45.15:0,45,648	0/0:17,0:17:50.89:0,51,585	0/0:26,0:26:74.14:0,74,904	0/0:25,0:25:75.23:0,75,1059	0/0:23,0:23:69.23:0,69,993	0/0:24,0:24:72.24:0,72,1037	1/1:0,25:25:75.21:905,75,0	0/0:17,0:17:48.15:0,48,672	0/0:23,0:23:69.23:0,69,978	0/0:19,0:19:57.19:0,57,820	0/0:18,0:18:54.18:0,54,776	0/0:20,0:20:57.17:0,57,796	0/0:15,0:15:45.14:0,45,629	1/1:1,19:20:51.16:632,51,0	1/1:0,24:24:60.19:744,60,0	0/0:33,0:33:96.27:0,96,1334	0/0:29,0:29:84.24:0,84,1180	1/1:0,29:29:84.22:1000,84,0	1/1:0,26:26:75.07:871,75,0	0/0:26,0:26:78.25:0,78,1105	1/1:0,22:22:63.20:781,63,0	0/0:20,0:20:60.14:0,60,820	0/0:24,0:24:69.23:0,69,992	1/1:1,23:24:60.19:744,60,0	0/0:22,0:22:60.20:0,60,863	0/0:22,0:22:63.21:0,63,905	0/0:9,0:9:26.98:0,27,362
chr10	5482260	.	CT	C	450	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.654;DP=565;FS=12.541;HRun=2;HaplotypeScore=57.2376;InbreedingCoeff=0.9864;MQ=72.79;MQ0=0;MQRankSum=-3.436;QD=30.00;ReadPosRankSum=1.081;VQSLOD=1.9231;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,108,1613	0/0:13,0:13:39.13:0,39,585	0/0:19,0:16:44.86:0,45,626	0/0:12,0:12:30.02:0,30,401	0/0:10,0:10:27.09:0,27,405	0/0:28,0:28:81.23:0,81,1165	0/0:31,0:31:93.30:0,93,1356	0/0:19,0:19:51.16:0,51,747	0/0:28,0:28:81.26:0,81,1183	0/0:21,0:21:63.20:0,63,924	0/0:7,0:7:21.06:0,21,292	0/0:17,0:17:51.16:0,51,723	0/0:21,0:21:63.20:0,63,906	0/0:15,0:15:45.14:0,45,649	0/0:27,0:27:81.26:0,81,1189	0/0:26,0:26:78.25:0,78,1144	1/1:0,15:15:42.14:545,42,0	0/0:15,0:15:42.14:0,42,630	0/0:27,0:27:72.24:0,72,1074	0/0:19,0:19:51.17:0,51,760	0/0:37,0:37:99:0,111,1622	0/0:15,0:15:45.15:0,45,674	0/0:17,0:17:51.17:0,51,763	0/0:18,0:18:54.18:0,54,809	0/0:25,0:25:72.23:0,72,1050	0/0:14,0:14:42.13:0,42,594	0/0:26,0:26:78.26:0,78,1156	0/0:6,0:6:18.06:0,18,270
chr10	5482866	.	CT	C	126.17	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.047;DP=393;FS=13.722;HRun=3;HaplotypeScore=51.2083;InbreedingCoeff=0.5651;MQ=53.07;MQ0=5;MQRankSum=0.814;QD=6.64;ReadPosRankSum=1.694;VQSLOD=-0.6143;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:19:17.03:0,17,115	0/0:6,0:6:16.86:0,17,202	0/0:14,0:2:1.80:0,2,13	0/0:7,0:2:2.96:0,3,19	0/0:25,0:25:56.93:0,57,528	0/0:12,0:12:36.03:0,36,419	0/0:7,0:7:6.16:0,6,119	0/0:34,0:32:51.54:0,52,355	0/0:12,0:11:30:0,30,352	0/0:18,0:18:41.16:0,41,463	0/0:10,0:9:18.05:0,18,228	0/0:5,0:5:10.85:0,11,133	0/0:9,0:9:20.52:0,21,200	0/0:4,0:4:6.01:0,6,69	0/0:11,0:11:15.26:0,15,256	0/0:11,0:11:27.63:0,28,178	1/1:1,18:17:18.05:216,18,0	0/0:21,0:21:51.09:0,51,646	0/0:22,0:22:21.97:0,22,343	0/0:18,0:18:33.79:0,34,286	0/0:7,0:7:15.02:0,15,164	0/0:8,0:7:14.46:0,14,107	0/0:16,0:16:29.67:0,30,232	0/0:6,0:5:15.04:0,15,189	0/0:19,0:19:44.24:0,44,414	0/0:23,0:23:51.32:0,51,598	0/0:18,0:18:51.12:0,51,636	0/0:10,0:10:29.20:0,29,273
chr10	5483478	.	GAAA	G	1665.34	PASS	AB=0.722;AC=15;AF=0.268;AN=56;BaseQRankSum=3.422;DP=471;FS=5.255;HRun=14;HaplotypeScore=71.0983;InbreedingCoeff=0.4639;MQ=53.49;MQ0=26;MQRankSum=-6.897;QD=11.90;ReadPosRankSum=3.594;VQSLOD=0.9436;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:10:6.88:0,7,76	0/0:7,0:7:18.06:0,18,333	0/0:27,0:6:3.37:0,3,17	0/0:20,0:4:3.01:0,3,42	0/0:16,0:19:42.13:0,42,729	0/0:21,0:22:52.40:0,52,887	0/0:19,0:20:42.14:0,42,724	0/1:12,8:18:22.59:281,0,23	0/0:11,0:11:15.05:0,15,256	0/0:19,0:19:40:0,40,670	0/0:21,0:24:57.12:0,57,919	0/0:11,0:11:27.09:0,27,442	0/0:13,0:13:34.36:0,34,593	0/0:13,0:13:30.04:0,30,465	1/1:6,5:11:11.01:138,11,0	0/1:5,7:10:83.71:84,0,165	0/0:20,0:20:42.13:0,42,552	0/0:22,0:21:48.10:0,48,743	0/1:9,5:12:77.09:119,0,77	0/1:11,4:15:72.74:121,0,73	0/0:19,0:21:36.12:0,36,643	1/1:5,4:9:12.47:141,12,0	0/0:17,0:20:40.31:0,40,597	0/0:24,0:25:60.18:0,60,1065	0/1:11,5:17:99:134,0,139	1/1:5,10:14:33.03:383,33,0	1/1:4,8:13:22.58:276,23,0	1/1:6,5:10:11.62:168,12,0
chr10	5483490	.	A	AG	352.17	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=4.006;DP=546;FS=5.673;HRun=0;HaplotypeScore=80.4244;InbreedingCoeff=0.6679;MQ=58.99;MQ0=23;MQRankSum=-2.290;QD=5.87;ReadPosRankSum=0.956;VQSLOD=2.4261;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:10:19.28:0,19,104	0/0:7,0:7:21.05:0,21,244	0/1:40,0:15:4.84:5,0,145	0/0:33,0:11:8.85:0,9,118	0/0:23,0:23:54.51:0,55,576	0/0:22,0:22:62.87:0,63,704	0/0:18,0:18:47.59:0,48,488	0/0:28,0:24:61.07:0,61,371	0/0:8,0:8:22.27:0,22,217	0/0:22,0:22:65.91:0,66,685	0/0:26,0:26:68.78:0,69,754	0/0:13,0:13:34.60:0,35,340	0/0:18,0:17:47.94:0,48,460	0/0:16,0:16:42.01:0,42,415	0/0:13,0:13:27.63:0,28,166	0/0:17,0:15:28.40:0,28,171	1/1:13,7:20:39.32:446,39,0	0/0:25,0:22:60.75:0,61,560	0/0:19,0:15:37.96:0,38,241	0/0:21,0:20:49.28:0,49,306	0/0:16,0:16:45.06:0,45,520	0/0:11,0:11:17.40:0,17,98	0/0:17,0:17:31.90:0,32,370	0/0:26,0:26:66.03:0,66,731	0/0:27,0:25:59.70:0,60,376	0/0:21,0:20:57.22:0,57,378	0/0:15,0:15:40.40:0,40,243	0/0:12,0:10:26.21:0,26,156
chr10	5483494	.	C	CA	857.13	PASS	AB=0.964;AC=24;AF=0.429;AN=56;BaseQRankSum=3.686;DP=558;FS=1.318;HRun=11;HaplotypeScore=80.3486;InbreedingCoeff=0.4714;MQ=59.12;MQ0=21;MQRankSum=-3.418;QD=2.87;ReadPosRankSum=-0.983;VQSLOD=-0.4010;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:11:6.52:29,7,0	0/0:8,0:8:14.91:0,15,113	0/0:39,0:15:14.90:0,15,147	0/1:33,0:11:20.33:20,0,34	0/0:22,0:23:37.86:0,38,281	0/0:21,0:21:35.79:0,36,277	0/0:16,1:18:2.38:0,2,198	1/1:32,0:28:11.88:66,12,0	0/0:7,0:7:17.81:0,18,131	0/0:23,0:23:41.78:0,42,323	0/0:24,1:25:9.21:0,9,224	0/0:13,0:13:28.24:0,28,186	0/0:18,0:17:43.82:0,44,325	0/1:16,0:16:3.70:4,0,145	1/1:13,0:13:1.96:4,2,0	0/1:17,0:15:9.08:9,0,18	0/0:9,0:19:35.34:0,35,131	0/1:21,1:21:30.68:31,0,166	1/1:23,0:19:9.64:45,10,0	1/1:22,0:21:4.47:31,4,0	0/1:15,1:16:0.57:1,0,179	1/1:11,0:11:0.47:2,0,0	0/0:18,0:18:26.78:0,27,204	0/0:26,0:26:41.71:0,42,320	1/1:28,0:26:2.64:9,3,0	0/1:19,3:22:4.15:313,0,4	1/1:15,2:17:25.21:229,25,0	1/1:6,6:11:24.05:242,24,0
chr10	5483544	.	CAATT	C	1024.51	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.005;DP=520;FS=14.820;HRun=0;HaplotypeScore=101.0941;InbreedingCoeff=0.9940;MQ=65.24;MQ0=0;MQRankSum=-3.896;QD=44.54;ReadPosRankSum=0.644;VQSLOD=3.6076;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:66.23:0,66,1755	0/0:7,0:7:21.07:0,21,552	0/0:23,0:19:54.16:0,54,1325	0/0:14,0:11:28.48:0,28,746	0/0:26,0:26:72.25:0,72,1892	0/0:19,0:18:54.19:0,54,1441	0/0:20,0:20:60.21:0,60,1519	0/0:25,0:25:75.25:0,75,1862	0/0:16,0:16:48.16:0,48,1266	0/0:20,0:20:57.18:0,57,1483	0/0:15,0:15:45.15:0,45,1215	0/0:17,0:17:51.18:0,51,1376	0/0:17,0:17:48.16:0,48,1249	0/0:19,0:19:57.20:0,57,1537	0/0:15,0:15:45.15:0,45,1132	0/0:13,0:13:36.12:0,36,927	1/1:0,23:23:60.21:1119,60,0	0/0:25,0:25:72.25:0,72,1939	0/0:13,0:12:30.10:0,30,797	0/0:19,0:19:51.17:0,51,1295	0/0:17,0:17:42.14:0,42,1081	0/0:10,0:10:30.10:0,30,810	0/0:19,0:19:57.20:0,57,1526	0/0:23,0:23:69.24:0,69,1764	0/0:22,0:22:57.20:0,57,1509	0/0:18,0:18:51.18:0,51,1351	0/0:27,0:27:75.26:0,75,2014	0/0:16,0:16:45.15:0,45,1214
chr10	5483882	.	CTTAG	C	1524.46	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=7.486;DP=738;FS=0.682;HRun=0;HaplotypeScore=116.4619;InbreedingCoeff=0.6722;MQ=61.59;MQ0=5;MQRankSum=0.454;QD=30.49;ReadPosRankSum=2.486;VQSLOD=3.8115;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:93.32:0,93,2426	0/0:10,0:10:30.10:0,30,793	0/0:23,0:13:36.12:0,36,812	0/1:17,0:12:9.56:10,0,664	0/0:34,0:34:99:0,102,2648	0/0:20,0:20:57.18:0,57,1453	0/0:31,0:31:87.30:0,87,2191	0/0:33,0:33:84.26:0,84,2055	0/0:30,0:30:90.31:0,90,2370	0/0:27,0:27:81.26:0,81,2048	0/0:26,0:26:69.24:0,69,1789	0/0:25,0:25:75.26:0,75,1971	0/0:20,0:20:57.18:0,57,1451	0/0:16,0:16:48.16:0,48,1241	0/0:25,0:25:72.25:0,72,1855	0/0:22,0:22:63.22:0,63,1667	1/1:1,32:33:87.30:1617,87,0	0/0:29,0:29:87.30:0,87,2218	0/0:29,0:29:78.27:0,78,2039	0/0:30,0:30:87.26:0,87,2179	0/0:35,0:35:99:0,102,2650	0/0:28,0:28:84.29:0,84,2228	0/0:26,0:26:78.27:0,78,2072	0/0:42,0:42:99:0,126,3307	0/0:21,0:21:57.15:0,57,1424	0/0:32,0:32:84.29:0,84,2239	0/0:30,0:30:87.30:0,87,2256	0/0:13,0:13:33.11:0,33,880
chr10	5484062	.	G	GT	2222.62	PASS	AB=0.902;AC=22;AF=0.393;AN=56;BaseQRankSum=-2.698;DP=714;FS=0.388;HRun=14;HaplotypeScore=102.3889;InbreedingCoeff=0.3909;MQ=68.46;MQ0=2;MQRankSum=-1.556;QD=5.52;ReadPosRankSum=-3.018;VQSLOD=1.9709;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,0:34:23.33:119,23,0	0/0:7,0:8:16.79:0,17,102	0/1:31,0:19:9.54:10,0,45	0/1:18,0:14:9.47:18,0,9	0/1:23,1:26:16.57:17,0,133	0/1:16,3:23:32.04:32,0,168	0/0:24,1:25:22.72:0,23,267	0/1:23,3:29:9.24:9,0,172	0/0:31,0:36:66:0,66,388	0/0:20,1:23:4.38:0,4,151	0/1:26,2:30:15.20:15,0,228	0/0:24,0:27:11.57:0,12,167	0/0:32,0:34:63.82:0,64,406	0/0:21,0:21:35.29:0,35,230	0/0:5,0:27:42.75:0,43,123	1/1:7,24:31:35.58:418,36,0	0/1:26,3:29:17.07:17,0,279	0/0:17,3:21:20.03:0,20,248	1/1:17,3:22:38.33:282,38,0	1/1:3,16:20:15.63:232,16,0	0/0:15,0:16:31.50:0,32,197	1/1:7,19:27:44.76:388,45,0	0/0:20,0:20:25.60:0,26,170	0/0:24,0:25:49.23:0,49,312	0/0:7,0:28:36.62:0,37,106	0/1:14,22:37:8.50:384,0,9	1/1:17,11:28:7.69:304,8,0	1/1:9,4:14:9.34:172,9,0
chr10	5485077	.	GGGAAGGGAAA	G	729.20	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.827;DP=629;FS=0.000;HRun=0;HaplotypeScore=203.5964;InbreedingCoeff=0.9406;MQ=75.57;MQ0=1;MQRankSum=-3.711;QD=34.72;ReadPosRankSum=-0.396;VQSLOD=2.8836;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,9:21:27.09:823,27,0	0/0:11,0:11:33.09:0,33,1491	0/0:40,0:34:75.06:0,75,2725	0/0:32,0:26:21.85:0,22,1074	0/0:16,0:16:39.13:0,39,2013	0/0:23,0:23:63.20:0,63,2842	0/0:25,0:25:37.09:0,37,2388	0/0:20,0:20:45.15:0,45,1878	0/0:13,0:13:39.13:0,39,1909	0/0:18,0:18:51.18:0,51,2450	0/0:18,0:18:48.16:0,48,2372	0/0:16,0:16:36.12:0,36,1711	0/0:25,0:25:66.23:0,66,3065	0/0:24,0:24:66.23:0,66,3216	0/0:22,0:22:60.21:0,60,2969	0/0:21,0:21:57.20:0,57,2873	0/0:29,0:29:69.24:0,69,3250	0/0:18,0:18:48.16:0,48,2419	0/0:23,0:23:60.17:0,60,2673	0/0:19,0:19:48.16:0,48,2401	0/0:29,0:28:78.27:0,78,3582	0/0:23,0:23:60.21:0,60,3009	0/0:33,0:33:87.30:0,87,4165	0/0:35,0:35:96.33:0,96,4581	0/0:12,0:12:36.12:0,36,1675	0/0:31,0:31:84.29:0,84,4188	0/0:26,0:26:75.26:0,75,3786	0/0:3,0:3:9.03:0,9,438
chr10	5485108	.	G	GGA	1063.62	PASS	AB=0.877;AC=8;AF=0.143;AN=56;BaseQRankSum=3.624;DP=644;FS=8.395;HRun=0;HaplotypeScore=112.3039;InbreedingCoeff=0.6027;MQ=64.90;MQ0=14;MQRankSum=-5.919;QD=10.74;ReadPosRankSum=-1.496;VQSLOD=2.2236;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:17,6:23:43.78:359,0,44	0/0:12,0:12:18.03:0,18,202	0/0:50,0:19:8.50:0,8,171	0/0:75,0:24:25.49:0,25,223	0/0:15,0:15:18.06:0,18,216	0/0:20,0:21:22.53:0,23,329	0/0:25,0:26:59.08:0,59,619	1/1:25,0:24:2.08:114,2,0	0/0:11,0:11:21.05:0,21,241	0/0:17,0:17:24.07:0,24,288	0/0:14,0:15:29.91:0,30,327	0/0:16,0:16:24.06:0,24,276	0/0:22,0:22:45.12:0,45,526	0/0:18,0:19:35.94:0,36,410	0/0:21,0:21:48.15:0,48,575	0/0:21,0:21:39.63:0,40,408	0/0:26,0:26:20.10:0,20,216	0/0:18,0:18:39.10:0,39,454	0/0:15,0:15:32.95:0,33,360	0/0:17,0:17:23.86:0,24,249	0/0:26,0:26:51.10:0,51,584	0/0:22,0:22:23.98:0,24,267	0/0:27,0:27:51.14:0,51,600	0/0:35,0:36:81.05:0,81,921	0/0:17,0:17:33.07:0,33,373	0/1:23,1:25:4.30:366,0,4	1/1:16,5:21:21.07:316,21,0	1/1:5,0:4:3.01:42,3,0
chr10	5485126	.	AG	A	491.23	PASS	AB=0.837;AC=7;AF=0.125;AN=56;BaseQRankSum=7.846;DP=550;FS=6.189;HRun=2;HaplotypeScore=88.2128;InbreedingCoeff=0.0679;MQ=55.94;MQ0=24;MQRankSum=-6.079;QD=5.34;ReadPosRankSum=-1.687;VQSLOD=-0.0850;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:15,6:21:54.07:194,0,54	0/0:9,0:9:21.07:0,21,296	0/0:43,0:9:13.51:0,14,194	0/0:68,0:15:27.67:0,28,329	0/0:12,0:12:26.84:0,27,388	0/0:23,0:23:49.99:0,50,609	0/0:26,0:26:66.96:0,67,981	0/1:18,0:17:14.32:14,0,60	0/0:12,0:12:21.86:0,22,362	0/0:16,0:16:42.14:0,42,603	0/0:12,0:12:35.14:0,35,471	0/0:12,0:12:33.10:0,33,464	0/0:20,0:20:57.17:0,57,811	0/0:15,0:15:41.16:0,41,568	0/0:20,0:20:60.19:0,60,862	0/1:15,3:18:38.02:38,0,153	0/0:13,1:14:6.04:0,6,108	0/0:15,0:15:43.39:0,43,627	0/0:15,0:14:36.99:0,37,225	0/0:11,0:11:4.93:0,5,115	0/0:26,0:26:63.19:0,63,903	0/0:14,0:13:21.91:0,22,157	0/0:23,0:23:63.19:0,63,874	0/0:38,0:38:98.27:0,98,1350	0/0:14,0:14:33.10:0,33,476	0/1:7,11:18:40.76:240,0,41	0/1:12,1:13:35.29:93,0,35	1/1:3,1:2:3.01:38,3,0
chr10	5485132	.	A	AAGGAGG	370.66	PASS	AB=0.997;AC=10;AF=0.179;AN=56;BaseQRankSum=6.351;DP=505;FS=4.520;HRun=0;HaplotypeScore=129.9959;InbreedingCoeff=0.2769;MQ=54.44;MQ0=25;MQRankSum=-6.143;QD=2.15;ReadPosRankSum=1.246;VQSLOD=2.3152;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:16,0:17:16.34:49,0,16	0/0:7,0:6:15.05:0,15,296	0/1:36,0:7:0:0,0,0	0/1:55,0:10:0:0,0,0	0/0:13,0:12:18.06:0,18,371	0/0:20,0:19:33.10:0,33,594	0/0:25,0:25:63.12:0,63,1141	0/1:14,0:14:24.30:70,0,24	0/0:10,0:10:1.21:0,1,224	0/0:18,0:18:33.11:0,33,642	0/0:12,0:12:27.05:0,27,458	0/0:12,0:12:33.11:0,33,680	0/0:18,0:18:39.12:0,39,757	0/0:15,0:15:36.07:0,36,576	0/0:21,0:21:36.12:0,36,749	0/0:17,0:17:20.83:0,21,192	1/1:6,10:20:8.98:194,9,0	0/0:16,0:16:7.21:0,7,392	0/0:15,0:14:13.72:0,14,98	0/0:11,0:11:7.08:0,7,42	0/0:24,0:24:26.17:0,26,678	0/0:13,0:12:4.82:0,5,31	0/0:19,0:19:38.62:0,39,735	0/0:33,0:33:72.21:0,72,1377	0/0:14,0:13:24.06:0,24,511	0/1:13,0:14:84.39:137,0,84	0/1:11,0:11:35.76:36,0,100	1/1:3,0:1:2.80:13,3,0
chr10	5485140	.	GGAGGAGGAGGAA	G	2411.14	PASS	AB=0.992;AC=14;AF=0.250;AN=56;BaseQRankSum=8.673;DP=464;FS=4.935;HRun=0;HaplotypeScore=155.4989;InbreedingCoeff=0.3484;MQ=51.58;MQ0=24;MQRankSum=-8.285;QD=15.16;ReadPosRankSum=-0.564;VQSLOD=2.5348;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:15,0:15:85.55:341,0,86	0/0:6,0:5:15.05:0,15,642	1/1:25,0:4:2.04:6,2,0	0/1:41,0:9:3.41:3,0,16	0/0:11,0:9:21.07:0,21,962	0/0:17,0:16:36.12:0,36,1869	0/0:27,0:27:73.49:0,73,3044	0/1:18,0:17:99:236,0,177	0/0:9,0:9:23.56:0,24,663	0/0:16,0:16:42.10:0,42,2143	0/0:12,0:12:33.11:0,33,1564	0/0:12,0:12:36.12:0,36,1795	0/0:17,0:17:39.13:0,39,1963	0/0:18,0:18:54.17:0,54,1870	0/0:20,0:20:56.78:0,57,2291	0/1:17,0:16:99:288,0,176	0/0:22,0:22:20.98:0,21,576	0/0:12,0:12:23.98:0,24,1181	0/0:12,0:10:19.79:0,20,222	0/1:10,0:10:40.21:116,0,40	0/0:27,0:27:61.33:0,61,2450	0/1:9,0:7:73.02:114,0,73	0/0:18,0:18:42.14:0,42,1890	0/0:30,0:30:81.28:0,81,3888	0/0:19,0:18:45.15:0,45,2010	1/1:8,3:11:33.11:916,33,0	1/1:3,7:10:15.05:522,15,0	1/1:2,0:1:3.01:31,3,0
chr10	5485143	.	GGAGGAGGAA	G	1823.44	PASS	AB=1.000;AC=14;AF=0.269;AN=52;BaseQRankSum=9.938;DP=459;FS=0.570;HRun=0;HaplotypeScore=134.5379;InbreedingCoeff=0.7413;MQ=51.69;MQ0=25;MQRankSum=-8.109;QD=16.88;ReadPosRankSum=-1.221;VQSLOD=2.7962;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:15,0:15:49.49:220,0,49	0/0:6,0:5:15.04:0,15,410	0/0:23,0:4:0.89:0,1,2	./.	0/0:12,0:9:21.06:0,21,660	0/0:15,0:14:36.11:0,36,1367	0/0:27,0:27:61.56:0,62,1921	0/1:22,0:20:7.11:7,0,257	0/0:10,0:10:1.98:0,2,361	0/0:16,0:16:42.13:0,42,1578	0/0:12,0:12:33.10:0,33,1151	0/0:12,0:12:36.11:0,36,1301	0/0:15,0:15:39.13:0,39,1433	0/0:19,0:19:42.10:0,42,1181	0/0:20,0:20:50.85:0,51,1601	1/1:12,5:16:32.99:472,33,0	0/0:21,0:21:18.02:0,18,431	0/0:12,0:12:18.06:0,18,804	1/1:14,0:12:15.38:141,15,0	1/1:9,2:11:20.84:204,21,0	0/0:26,0:26:60.04:0,60,1764	1/1:6,3:7:11.93:135,12,0	0/0:17,0:17:36.11:0,36,1252	0/0:32,0:32:81.17:0,81,2797	0/0:18,0:17:45.15:0,45,1512	1/1:11,0:11:30.90:506,31,0	1/1:9,0:9:15.05:317,15,0	./.
chr10	5485170	.	AGAAGAG	A	1630.81	PASS	AB=1.000;AC=11;AF=0.204;AN=54;BaseQRankSum=9.246;DP=468;FS=1.155;HRun=0;HaplotypeScore=119.4339;InbreedingCoeff=0.6179;MQ=54.04;MQ0=11;MQRankSum=-3.647;QD=17.54;ReadPosRankSum=-0.580;VQSLOD=3.3072;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:14,0:14:22.91:246,0,23	0/0:4,0:3:9.03:0,9,231	0/0:12,0:3:2.12:0,2,168	0/0:17,0:6:12.51:0,13,284	0/0:11,0:9:24.07:0,24,644	0/0:16,0:15:45.10:0,45,1243	0/0:31,0:31:86.71:0,87,2103	0/0:24,0:22:42.30:0,42,763	0/0:9,0:10:6.90:0,7,449	0/0:20,0:20:57.18:0,57,1741	0/0:12,0:12:36.06:0,36,1000	0/0:18,0:18:54.09:0,54,1536	0/0:19,0:19:51.11:0,51,1309	0/0:20,0:20:60.13:0,60,1826	0/0:19,0:19:45.06:0,45,958	1/1:0,15:15:21:398,21,0	0/0:26,0:26:48.04:0,48,1317	0/0:10,0:10:30.05:0,30,831	1/1:3,12:14:35.97:530,36,0	1/1:1,11:12:24.03:374,24,0	0/0:26,0:26:70.74:0,71,2024	1/1:2,8:8:14.94:207,15,0	0/0:15,0:15:45.11:0,45,1120	0/0:43,0:42:99:0,115,3096	0/0:20,0:20:45.11:0,45,955	0/1:15,0:15:35.69:36,0,357	0/1:12,0:12:3.03:3,0,261	./.
chr10	5485172	.	A	AGG	210.22	PASS	AB=0.765;AC=1;AF=0.019;AN=54;BaseQRankSum=5.473;DP=473;FS=4.981;HRun=1;HaplotypeScore=94.1294;InbreedingCoeff=-0.0357;MQ=54.72;MQ0=10;MQRankSum=-2.709;QD=16.17;ReadPosRankSum=-1.022;VQSLOD=0.5962;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:9,4:13:38.29:284,0,38	0/0:5,0:4:9.03:0,9,146	0/0:13,0:4:9.02:0,9,124	0/0:19,0:7:12.04:0,12,196	0/0:13,0:11:30.06:0,30,418	0/0:17,0:16:45.15:0,45,731	0/0:32,0:32:93.71:0,94,1390	0/0:24,0:22:44.80:0,45,599	0/0:10,0:10:27.51:0,28,410	0/0:19,0:19:57.19:0,57,909	0/0:12,0:12:30.10:0,30,489	0/0:18,0:18:54.18:0,54,870	0/0:20,0:20:54.12:0,54,816	0/0:21,0:21:60.20:0,60,976	0/0:19,0:19:40.06:0,40,301	0/0:15,0:15:20.37:0,20,158	0/0:26,0:26:48.15:0,48,737	0/0:11,0:11:30.07:0,30,458	0/0:13,0:12:29.04:0,29,215	0/0:12,0:12:14.94:0,15,179	0/0:26,0:26:24.11:0,24,1062	0/0:9,0:7:1.07:0,1,63	0/0:16,0:16:48.14:0,48,730	0/0:42,0:41:99:0,111,1801	0/0:20,0:20:28.29:0,28,376	0/0:14,0:14:22.02:0,22,209	0/0:13,0:13:10.08:0,10,169	./.
chr10	5485173	.	A	AGAG	1901.90	PASS	AB=1.000;AC=10;AF=0.185;AN=54;BaseQRankSum=-2.071;DP=478;FS=0.000;HRun=0;HaplotypeScore=97.1504;InbreedingCoeff=0.7377;MQ=56.00;MQ0=10;MQRankSum=-1.408;QD=17.77;ReadPosRankSum=-0.456;VQSLOD=3.3376;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,0:13:30.10:592,30,0	0/0:5,0:4:6.02:0,6,85	0/1:14,0:5:0.75:1,0,127	0/0:18,0:7:14.68:0,15,192	0/0:13,0:11:29.87:0,30,341	0/0:19,0:18:36.11:0,36,495	0/0:32,0:32:75.16:0,75,940	1/1:24,0:22:26.79:330,27,0	0/0:10,0:10:15.04:0,15,197	0/0:19,0:19:48.16:0,48,669	0/0:12,0:12:24.08:0,24,342	0/0:18,0:18:48.13:0,48,635	0/0:20,0:20:44.69:0,45,558	0/0:21,0:21:57.16:0,57,776	1/1:5,13:20:32.79:659,33,0	0/0:15,0:15:20.98:0,21,196	0/0:25,0:26:42.11:0,42,548	0/0:11,0:11:27.04:0,27,346	0/0:13,0:12:26.95:0,27,245	0/0:12,0:12:22.49:0,22,193	0/0:25,0:25:62.50:0,62,835	0/0:9,0:7:13.48:0,13,110	0/0:16,0:16:33.07:0,33,418	0/0:41,0:40:90.03:0,90,1237	1/1:9,12:22:24.08:460,24,0	0/1:14,0:14:21.30:21,0,153	0/0:14,0:14:3.92:0,4,158	./.
chr10	5486265	.	G	GCTT	7783.65	PASS	AB=0.566;AC=9;AF=0.161;AN=56;BaseQRankSum=5.536;DP=671;FS=10.120;HRun=0;HaplotypeScore=111.0304;InbreedingCoeff=0.8586;MQ=81.84;MQ0=0;MQRankSum=-14.007;QD=59.42;ReadPosRankSum=-2.197;VQSLOD=5.4749;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:84.27:0,84,1447	0/0:13,0:13:36.12:0,36,635	0/0:19,0:19:55.74:0,56,932	0/0:23,0:23:65.56:0,66,1042	0/0:23,0:23:66.23:0,66,1165	0/0:22,0:22:57.20:0,57,1003	0/0:18,0:18:51.17:0,51,895	1/1:11,30:42:99:2670,117,0	0/0:27,0:27:78.25:0,78,1348	0/0:33,0:33:93.32:0,93,1633	0/0:28,0:28:84.29:0,84,1475	0/0:14,0:14:39.13:0,39,683	0/0:25,0:25:75.26:0,75,1323	0/0:18,0:18:51.16:0,51,871	0/0:24,0:24:72.25:0,72,1271	0/0:15,0:15:42.13:0,42,713	1/1:10,14:24:45.15:1062,45,0	0/0:8,0:8:24.08:0,24,423	0/0:28,0:28:75.25:0,75,1292	0/0:31,0:31:90.31:0,90,1588	0/0:33,0:33:96.33:0,96,1687	0/0:31,0:31:93.32:0,93,1631	0/0:27,0:27:81.28:0,81,1426	0/0:21,0:21:60.21:0,60,1059	0/0:30,0:30:90.31:0,90,1579	0/1:7,23:30:99:1758,0,121	1/1:4,27:30:87.26:2010,87,0	1/1:0,4:4:12.04:283,12,0
chr10	5486295	.	A	ATTGT	8274.34	PASS	AB=0.571;AC=9;AF=0.161;AN=56;BaseQRankSum=6.820;DP=644;FS=6.811;HRun=0;HaplotypeScore=119.1868;InbreedingCoeff=0.8541;MQ=69.80;MQ0=0;MQRankSum=-15.119;QD=68.38;ReadPosRankSum=-1.531;VQSLOD=6.6856;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:75.15:0,75,1382	0/0:18,0:18:54.16:0,54,1008	0/0:11,0:11:15.91:0,16,414	0/0:9,0:9:18:0,18,300	0/0:22,0:22:66.21:0,66,1248	0/0:23,0:22:63.22:0,63,1222	0/0:20,0:20:60.19:0,60,1161	1/1:19,22:41:99:2941,123,0	0/0:30,0:30:90.27:0,90,1692	0/0:34,0:34:96.32:0,96,1886	0/0:25,0:25:75.22:0,75,1409	0/0:16,0:16:42.13:0,42,785	0/0:19,0:19:57.20:0,57,1126	0/0:19,0:19:57.14:0,57,997	0/0:21,0:21:63.19:0,63,1188	0/0:17,0:17:51.16:0,51,983	1/1:2,17:20:42.14:1170,42,0	0/0:11,0:11:33.11:0,33,647	0/0:39,0:39:99:0,117,2115	0/0:27,0:27:81.23:0,81,1500	0/0:33,0:33:99:0,99,1825	0/0:31,0:31:87.27:0,87,1656	0/0:25,0:25:72.23:0,72,1402	0/0:22,0:21:63.13:0,63,1199	0/0:25,0:25:69.24:0,69,1377	0/1:8,24:32:84.60:1904,0,85	1/1:3,21:23:72.25:1941,72,0	1/1:1,3:4:12.04:319,12,0
chr10	5487088	.	T	TA	4887.78	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-6.919;DP=608;FS=2.283;HRun=0;HaplotypeScore=65.7955;InbreedingCoeff=0.9758;MQ=81.62;MQ0=0;MQRankSum=-0.633;QD=41.07;ReadPosRankSum=-0.811;VQSLOD=5.1153;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,102,1409	0/0:10,0:10:30.09:0,30,404	0/0:19,0:19:51.63:0,52,687	0/0:28,0:27:70.81:0,71,875	0/0:16,0:16:48.14:0,48,635	0/0:16,0:16:45.13:0,45,611	0/0:27,0:27:78.22:0,78,1041	1/1:2,31:33:90.23:1296,90,0	0/0:31,0:31:90.28:0,90,1221	0/0:35,0:35:99:0,102,1394	0/0:19,0:19:57.19:0,57,796	0/0:20,0:20:60.20:0,60,837	0/0:25,0:25:71.26:0,71,941	0/0:17,0:17:51.16:0,51,698	0/0:24,0:24:69.20:0,69,931	0/0:13,0:13:39.12:0,39,530	1/1:0,28:28:75.26:1173,75,0	0/0:16,0:16:48.14:0,48,653	0/0:11,0:10:33.10:0,33,447	0/0:23,0:23:69.23:0,69,964	0/0:24,0:24:66.20:0,66,887	0/0:14,0:14:42.13:0,42,571	0/0:16,0:16:42.14:0,42,578	0/0:31,0:31:90.30:0,90,1250	0/0:20,0:20:54.17:0,54,741	1/1:1,16:17:6.18:637,6,0	1/1:1,27:28:78.27:1220,78,0	1/1:0,13:13:36.12:562,36,0
chr10	5491000	.	TA	T	3049.05	PASS	AB=0.736;AC=24;AF=0.429;AN=56;BaseQRankSum=8.486;DP=558;FS=5.122;HRun=13;HaplotypeScore=71.3159;InbreedingCoeff=0.7121;MQ=76.18;MQ0=1;MQRankSum=-2.431;QD=10.70;ReadPosRankSum=1.322;VQSLOD=3.3698;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,0:18:28.51:82,29,0	0/1:10,2:12:12.52:13,0,201	0/0:19,0:14:6.36:0,6,101	0/0:18,0:15:8.38:0,8,45	0/0:17,0:24:50.55:0,51,432	0/0:23,1:25:56.91:0,57,535	0/0:18,0:18:45.01:0,45,415	1/1:9,13:22:35.68:258,36,0	0/0:17,1:18:24.55:0,25,409	0/0:22,0:22:25.07:0,25,372	0/0:20,2:22:12.98:0,13,414	0/0:17,0:17:36.05:0,36,346	0/0:11,0:12:29.86:0,30,268	0/0:17,1:18:20.15:0,20,353	1/1:6,17:23:0.36:259,0,0	1/1:8,19:27:6.50:364,7,0	1/1:4,19:27:26.67:322,27,0	0/0:4,0:3:0.55:0,1,25	1/1:8,18:27:42.33:388,42,0	0/1:12,19:32:31.02:293,0,31	0/0:17,1:19:16.98:0,17,308	1/1:8,11:19:32.74:239,33,0	0/0:12,0:16:32.76:0,33,300	0/0:17,2:19:1.22:0,1,322	1/1:7,11:18:32.79:241,33,0	1/1:4,16:20:47.63:345,48,0	1/1:8,20:28:12.37:255,12,0	1/1:3,9:12:26.82:197,27,0
chr10	5491170	.	GTTTTTTGTTTTTTGT	G	5560.70	PASS	AB=0.556;AC=7;AF=0.125;AN=56;BaseQRankSum=6.993;DP=568;FS=5.319;HRun=0;HaplotypeScore=258.3544;InbreedingCoeff=0.8323;MQ=63.92;MQ0=3;MQRankSum=-6.741;QD=62.48;ReadPosRankSum=1.202;VQSLOD=4.2290;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:30:75.25:0,75,4291	0/0:12,0:12:30.10:0,30,1852	0/0:18,0:13:23.46:0,23,409	0/0:24,0:16:17.60:0,18,431	0/0:33,0:33:96.30:0,96,5445	0/0:18,0:18:45.15:0,45,2418	0/0:16,0:16:33.10:0,33,1691	0/0:19,0:19:39.12:0,39,1022	0/0:26,0:26:60.20:0,60,3809	0/0:27,0:27:54.14:0,54,2999	0/0:24,0:24:57.20:0,57,3610	0/0:14,0:14:36.12:0,36,2413	0/0:16,0:16:39.13:0,39,2655	0/0:16,0:16:33.11:0,33,2046	0/0:13,0:13:33.10:0,33,1937	0/1:3,12:15:33.82:1222,0,34	0/0:26,0:25:42.07:0,42,1259	0/0:17,0:17:33.11:0,33,2180	1/1:15,10:24:29.63:882,30,0	1/1:5,27:32:66.07:2330,66,0	0/0:11,0:11:27.09:0,27,1509	1/1:4,13:17:27.09:1127,27,0	0/0:20,0:20:48.16:0,48,2479	0/0:13,0:13:33.10:0,33,1891	0/0:19,0:19:51.18:0,51,2972	0/0:26,0:26:59.77:0,60,1754	0/0:26,0:25:69.20:0,69,2358	0/0:12,0:12:33.11:0,33,1071
chr10	5491184	.	GT	G	1846.70	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=14.634;DP=539;FS=3.958;HRun=7;HaplotypeScore=110.8392;InbreedingCoeff=0.8809;MQ=61.85;MQ0=10;MQRankSum=-10.814;QD=10.86;ReadPosRankSum=0.886;VQSLOD=2.1328;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:86.63:0,87,1053	0/0:10,0:10:30.10:0,30,377	0/0:29,0:16:25.68:0,26,255	0/0:26,1:12:8.90:0,9,178	0/0:35,0:35:96.29:0,96,1194	0/0:18,0:18:51.14:0,51,617	0/0:14,0:14:39.11:0,39,477	1/1:14,5:18:35.39:224,35,0	0/0:23,0:23:66.21:0,66,830	0/0:21,0:20:54.17:0,54,679	0/0:23,0:23:63.19:0,63,779	0/0:14,0:14:42.11:0,42,505	0/0:14,0:14:42.13:0,42,528	0/0:14,0:14:39.12:0,39,490	0/0:16,0:16:45.14:0,45,565	0/1:13,0:13:12.19:45,0,12	1/1:13,7:19:26.27:139,26,0	0/0:17,0:17:42.60:0,43,525	1/1:16,0:12:3.22:28,3,0	1/1:27,0:27:33.99:116,34,0	0/0:10,0:10:30.09:0,30,365	1/1:14,0:13:19.80:61,20,0	0/0:17,0:17:51.13:0,51,606	0/0:14,0:14:33.11:0,33,414	0/0:23,0:22:63.15:0,63,740	1/1:9,14:23:25.17:518,25,0	1/1:7,19:25:71.58:618,72,0	1/1:6,6:12:30.15:299,30,0
chr10	5491190	.	T	TG	1698.18	PASS	AB=1.000;AC=8;AF=0.143;AN=56;BaseQRankSum=8.850;DP=557;FS=6.098;HRun=0;HaplotypeScore=114.1737;InbreedingCoeff=0.7584;MQ=61.93;MQ0=10;MQRankSum=-5.038;QD=16.65;ReadPosRankSum=-1.574;VQSLOD=5.2255;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:93.74:0,94,1236	0/0:10,0:10:30.10:0,30,413	0/0:30,0:17:23.97:0,24,301	0/0:27,0:12:19.81:0,20,217	0/0:32,0:32:96.31:0,96,1313	0/0:18,0:18:54.12:0,54,690	0/0:14,0:14:39.12:0,39,527	0/1:18,0:17:9.88:46,0,10	0/0:24,0:24:72.22:0,72,974	0/0:21,0:20:60.19:0,60,813	0/0:24,0:24:69.21:0,69,919	0/0:14,0:14:42.12:0,42,555	0/0:14,0:14:42.14:0,42,581	0/0:13,0:13:39.13:0,39,539	0/0:15,0:15:45.15:0,45,628	0/0:18,0:18:42.87:0,43,241	0/1:20,0:20:2.28:2,0,23	0/0:17,0:17:48.57:0,49,629	0/0:19,0:15:24.38:0,24,128	0/0:32,0:32:53.21:0,53,257	0/0:11,0:11:33.09:0,33,429	0/0:17,0:16:30.09:0,30,150	0/0:17,0:17:51.14:0,51,664	0/0:12,0:12:33.11:0,33,460	0/0:22,0:21:63.18:0,63,819	1/1:23,1:24:12.81:561,13,0	1/1:22,4:25:73.99:885,74,0	1/1:10,4:14:36.78:351,37,0
chr10	5491197	.	TTG	T	1523.50	PASS	AB=0.944;AC=10;AF=0.179;AN=56;BaseQRankSum=15.774;DP=576;FS=7.608;HRun=0;HaplotypeScore=125.1446;InbreedingCoeff=0.3597;MQ=56.48;MQ0=10;MQRankSum=-12.943;QD=8.76;ReadPosRankSum=3.032;VQSLOD=2.4663;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:47.92:0,48,1461	0/0:8,0:8:24.08:0,24,439	0/0:28,0:15:26.83:0,27,497	0/0:26,0:12:10.86:0,11,256	0/0:34,0:34:99:0,102,1643	0/0:16,0:16:48.14:0,48,795	0/0:13,0:13:39.11:0,39,634	0/1:7,7:13:1.25:219,0,1	0/0:25,0:25:75.23:0,75,1263	0/0:23,0:22:66.19:0,66,1020	0/0:27,0:27:78.21:0,78,1327	0/0:13,0:13:39.13:0,39,710	0/0:15,0:15:45.12:0,45,762	0/0:12,0:12:33.11:0,33,579	0/0:16,0:16:48.16:0,48,830	0/1:17,0:17:39.45:39,0,229	1/1:14,8:22:7.78:241,8,0	0/0:17,0:17:51.15:0,51,851	0/0:25,0:21:3.04:0,3,325	0/1:37,0:37:62.36:62,0,372	0/0:11,0:11:33.10:0,33,520	0/1:18,0:17:33.64:34,0,226	0/0:20,0:20:60.05:0,60,848	0/0:13,0:13:36.09:0,36,597	0/0:23,0:22:66.18:0,66,1103	0/1:24,0:24:1.67:371,0,2	1/1:29,0:28:27.47:553,27,0	0/1:13,0:13:17.13:156,0,17
chr10	5491198	.	TG	T	1661.34	PASS	AB=1.000;AC=8;AF=0.143;AN=56;BaseQRankSum=11.606;DP=577;FS=1.620;HRun=1;HaplotypeScore=112.8085;InbreedingCoeff=0.6925;MQ=56.51;MQ0=10;MQRankSum=-9.236;QD=17.31;ReadPosRankSum=0.798;VQSLOD=3.9673;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:71.78:0,72,1225	0/0:8,0:8:24.08:0,24,351	0/0:30,0:16:15.25:0,15,399	0/0:25,1:12:10.38:0,10,207	0/0:34,0:34:99:0,102,1394	0/0:16,0:16:48.12:0,48,651	0/0:13,0:13:39.11:0,39,534	0/1:14,0:13:6.25:6,0,110	0/0:25,0:25:75.20:0,75,1028	0/0:23,0:22:66.20:0,66,872	0/0:27,0:27:78.20:0,78,1079	0/0:13,0:13:39.13:0,39,570	0/0:15,0:15:45.12:0,45,619	0/0:12,0:12:33.11:0,33,475	0/0:16,0:16:48.11:0,48,642	0/0:17,0:17:10.61:0,11,208	0/1:22,0:22:20.19:20,0,121	0/0:17,0:17:51.16:0,51,709	0/0:27,0:23:34.18:0,34,348	0/0:37,0:37:22.57:0,23,344	0/0:11,0:11:33.11:0,33,457	0/0:18,0:17:11.83:0,12,209	0/0:23,0:23:69.03:0,69,809	0/0:13,0:13:36.09:0,36,487	0/0:23,0:22:66.18:0,66,907	1/1:6,15:21:32.56:657,33,0	1/1:8,20:27:65.39:801,65,0	1/1:5,6:11:13.06:326,13,0
chr10	5491205	.	GTTGTT	G	3207.96	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=8.535;DP=577;FS=0.000;HRun=0;HaplotypeScore=150.4922;InbreedingCoeff=0.9947;MQ=58.90;MQ0=7;MQRankSum=-10.697;QD=34.13;ReadPosRankSum=0.482;VQSLOD=3.4389;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:97.58:0,98,2532	0/0:9,0:9:21.02:0,21,447	0/0:29,0:19:43.65:0,44,1080	0/0:27,0:13:30.10:0,30,632	0/0:31,0:31:69.24:0,69,2020	0/0:18,0:18:54.17:0,54,1382	0/0:12,0:12:33.11:0,33,906	1/1:14,0:13:36.05:590,36,0	0/0:22,0:22:57.16:0,57,1551	0/0:20,0:19:54.19:0,54,1523	0/0:29,0:29:81.26:0,81,2128	0/0:15,0:15:42.14:0,42,1169	0/0:15,0:15:42.14:0,42,1189	0/0:12,0:12:36.12:0,36,990	0/0:18,0:18:54.16:0,54,1301	0/0:19,0:19:50.79:0,51,765	1/1:16,7:24:26.02:703,26,0	0/0:19,0:19:50.78:0,51,1163	0/0:28,0:25:63.07:0,63,1304	0/0:38,0:38:86.01:0,86,1299	0/0:10,0:10:18.03:0,18,349	0/0:17,0:16:40.21:0,40,603	0/0:18,0:18:48.11:0,48,1208	0/0:15,0:15:42.14:0,42,1165	0/0:24,0:23:69.24:0,69,2024	1/1:20,0:20:54.12:807,54,0	1/1:23,5:27:63.09:989,63,0	1/1:8,0:8:18.06:295,18,0
chr10	5491208	.	GTT	G	2543.45	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=8.333;DP=568;FS=1.514;HRun=4;HaplotypeScore=116.5025;InbreedingCoeff=0.9501;MQ=58.95;MQ0=6;MQRankSum=-9.052;QD=26.77;ReadPosRankSum=-0.141;VQSLOD=2.1052;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,112,1854	0/0:9,0:9:24.08:0,24,415	0/0:30,0:20:59.99:0,60,873	0/0:25,0:13:36.04:0,36,538	0/0:28,0:28:78.25:0,78,1371	0/0:18,0:18:54.18:0,54,946	0/0:12,0:12:33.11:0,33,603	1/1:10,7:16:15.84:447,16,0	0/0:21,0:21:60.19:0,60,1080	0/0:19,0:18:54.18:0,54,978	0/0:31,0:31:90.31:0,90,1585	0/0:15,0:15:42.14:0,42,758	0/0:16,0:16:48.14:0,48,831	0/0:12,0:12:36.12:0,36,645	0/0:19,0:19:57.19:0,57,1003	0/0:19,0:19:51.09:0,51,633	1/1:13,8:21:2.75:314,3,0	0/0:19,0:19:56.81:0,57,914	0/0:25,0:23:63.17:0,63,974	0/0:35,0:35:86.52:0,87,1079	0/0:7,0:7:18.06:0,18,323	0/0:17,0:16:40.47:0,40,483	0/0:18,0:18:51.16:0,51,919	0/0:15,0:15:42.14:0,42,758	0/0:25,0:24:72.24:0,72,1305	1/1:2,18:20:58.32:778,58,0	1/1:9,18:26:62.57:826,63,0	1/1:4,6:10:22.31:344,22,0
chr10	5491210	.	T	TG	1391.29	PASS	AB=0.830;AC=7;AF=0.125;AN=56;BaseQRankSum=7.594;DP=567;FS=0.993;HRun=0;HaplotypeScore=108.5015;InbreedingCoeff=0.4285;MQ=59.08;MQ0=5;MQRankSum=-8.482;QD=14.65;ReadPosRankSum=0.076;VQSLOD=4.9060;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,112,1497	0/0:8,0:8:24.08:0,24,334	0/0:30,0:20:59.73:0,60,703	0/0:24,0:13:36.03:0,36,466	0/0:29,0:29:81.24:0,81,1083	0/0:19,0:19:57.16:0,57,774	0/0:12,0:12:36.11:0,36,488	0/1:9,10:18:27.76:403,0,28	0/0:20,0:20:60.19:0,60,821	0/0:19,0:18:54.17:0,54,740	0/0:30,0:30:90.30:0,90,1250	0/0:14,0:14:42.14:0,42,587	0/0:16,0:16:48.14:0,48,638	0/0:12,0:12:36.12:0,36,503	0/0:19,0:19:57.19:0,57,795	0/0:21,0:21:54.17:0,54,725	1/1:17,2:19:2.43:157,2,0	0/0:19,0:19:56.81:0,57,727	0/0:26,0:25:66.22:0,66,902	0/0:35,0:35:86.65:0,87,1164	0/0:7,0:7:18.06:0,18,251	0/0:16,0:15:40.53:0,41,509	0/0:18,0:18:54.16:0,54,720	0/0:15,0:15:42.14:0,42,587	0/0:25,0:24:72.23:0,72,991	1/1:19,1:20:52.85:417,53,0	0/1:27,0:26:16.85:357,0,17	0/1:8,2:10:43.93:190,0,44
chr10	5491643	.	GTATCC	G	3159.14	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=9.792;DP=621;FS=10.358;HRun=0;HaplotypeScore=116.2872;InbreedingCoeff=0.9995;MQ=66.23;MQ0=0;MQRankSum=-0.097;QD=41.57;ReadPosRankSum=1.084;VQSLOD=3.3100;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:60.18:0,60,1649	0/0:10,0:10:27.09:0,27,808	0/0:19,0:19:45.15:0,45,1228	0/0:23,0:20:46.66:0,47,1068	0/0:33,0:33:90.31:0,90,2619	0/0:37,0:37:99:0,99,2961	0/0:15,0:15:42.13:0,42,1194	0/0:28,0:28:60.19:0,60,1608	0/0:22,0:22:60.19:0,60,1693	0/0:24,0:24:72.25:0,72,2130	0/0:26,0:26:69.21:0,69,1853	0/0:15,0:15:42.14:0,42,1240	0/0:23,0:23:60.16:0,60,1730	0/0:19,0:19:57.20:0,57,1689	0/0:20,0:20:54.18:0,54,1558	1/1:1,14:15:33.11:660,33,0	0/0:20,0:20:51.18:0,51,1500	0/0:32,0:32:87.30:0,87,2583	1/1:3,13:16:39.09:707,39,0	1/1:5,18:23:51.17:933,51,0	0/0:23,0:23:63.22:0,63,1860	1/1:3,19:22:51.17:1019,51,0	0/0:24,0:24:63.22:0,63,1827	0/0:12,0:12:36.12:0,36,1080	0/0:20,0:20:48.16:0,48,1398	0/0:29,0:29:78.27:0,78,2288	0/0:32,0:31:87.28:0,87,2518	0/0:16,0:16:33.06:0,33,728
chr10	5491966	.	ATT	A	4081.29	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=11.318;DP=707;FS=2.123;HRun=10;HaplotypeScore=109.4637;InbreedingCoeff=0.9704;MQ=57.50;MQ0=4;MQRankSum=2.957;QD=27.03;ReadPosRankSum=2.757;VQSLOD=3.6796;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:3,0:25:49.91:0,50,171	0/0:8,0:8:24.08:0,24,381	0/0:13,0:6:14.22:0,14,163	0/0:19,0:15:39.10:0,39,542	0/0:38,0:39:99:0,108,1616	0/0:32,0:32:81.25:0,81,1241	0/0:25,0:26:72.15:0,72,1066	1/1:6,8:14:24.04:266,24,0	0/0:32,0:32:90.31:0,90,1428	0/0:35,0:35:93.32:0,93,1465	0/0:28,0:31:81.26:0,81,1229	0/0:19,0:19:57.19:0,57,904	0/0:27,0:27:66.22:0,66,1038	0/0:27,0:27:75.25:0,75,1166	0/0:3,0:28:62.89:0,63,232	1/1:3,32:35:96.25:1070,96,0	1/1:2,14:16:25.93:388,26,0	0/0:27,0:27:58.09:0,58,1054	1/1:4,14:16:42.08:452,42,0	1/1:5,35:40:93.19:1035,93,0	0/0:22,0:22:48.16:0,48,760	1/1:1,27:28:78.21:870,78,0	0/0:26,0:27:68.71:0,69,1034	0/0:26,0:26:69.23:0,69,1078	0/0:3,0:17:38.44:0,38,164	0/0:7,0:37:83.77:0,84,401	0/0:3,0:35:72.87:0,73,265	0/0:0,0:2:4.99:0,5,17
chr10	5492369	.	GTCTA	G	338.21	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.567;DP=657;FS=0.000;HRun=0;HaplotypeScore=116.8356;InbreedingCoeff=0.9356;MQ=67.78;MQ0=1;MQRankSum=-0.340;QD=19.89;ReadPosRankSum=1.330;VQSLOD=2.9212;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:62.96:0,63,1189	0/0:7,0:7:21.05:0,21,479	0/0:40,0:34:68.92:0,69,1108	0/0:24,0:24:48.09:0,48,907	0/0:26,0:26:72.17:0,72,1603	0/0:22,0:22:57.17:0,57,1331	0/0:17,0:17:48.10:0,48,942	0/0:35,0:35:75.20:0,75,1522	0/0:27,0:27:66.20:0,66,1552	0/0:31,0:31:90.28:0,90,2073	0/0:34,0:34:93.16:0,93,1891	0/0:25,0:25:69.22:0,69,1681	0/0:22,0:22:54.14:0,54,1203	0/0:28,0:28:75.23:0,75,1761	0/0:21,0:21:54.10:0,54,1050	0/0:29,0:29:60.18:0,60,1390	1/1:2,15:17:27.02:432,27,0	0/0:5,0:5:8.96:0,9,169	0/0:8,0:8:21.05:0,21,436	0/0:34,0:34:90.21:0,90,1937	0/0:19,0:19:54.16:0,54,1264	0/0:25,0:25:60.08:0,60,1304	0/0:23,0:23:63.17:0,63,1439	0/0:18,0:18:42.11:0,42,959	0/0:15,0:15:33.09:0,33,702	0/0:24,0:24:60.13:0,60,1335	0/0:33,0:32:84.26:0,84,1990	0/0:10,0:10:30.10:0,30,758
chr10	5492401	.	TTATC	T	2381.84	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=10.500;DP=612;FS=0.000;HRun=0;HaplotypeScore=107.9283;InbreedingCoeff=0.8253;MQ=61.36;MQ0=1;MQRankSum=-2.447;QD=28.36;ReadPosRankSum=0.690;VQSLOD=3.4779;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,32:39:84.10:1397,84,0	0/0:6,0:6:18.06:0,18,424	0/0:28,0:20:41.50:0,41,753	0/1:11,0:9:19.80:20,0,256	0/0:27,0:27:75.26:0,75,1870	0/0:22,0:22:63.22:0,63,1603	0/0:14,0:14:36.12:0,36,870	0/0:42,0:42:99:0,105,2530	0/0:27,0:27:72.25:0,72,1826	0/0:30,0:30:81.27:0,81,1984	0/0:34,0:34:93.30:0,93,2312	0/0:21,0:21:54.19:0,54,1389	0/0:21,0:21:54.19:0,54,1389	0/0:23,0:23:63.22:0,63,1589	1/1:3,16:19:35.90:607,36,0	0/0:17,0:17:51.18:0,51,1315	0/0:18,0:18:33.11:0,33,792	0/0:4,0:4:12.04:0,12,309	0/0:9,0:9:24.08:0,24,614	0/0:38,0:38:99:0,102,2460	0/0:13,0:13:24.08:0,24,556	0/0:21,0:21:57.20:0,57,1385	0/0:32,0:32:81.28:0,81,2041	0/0:20,0:20:51.17:0,51,1242	1/1:2,13:15:35.95:507,36,0	0/0:20,0:20:57.20:0,57,1430	0/0:32,0:31:84.29:0,84,2124	0/0:9,0:9:21.07:0,21,510
chr10	5493114	.	T	TG	11420.05	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-16.614;DP=657;FS=1.286;HRun=2;HaplotypeScore=58.7015;InbreedingCoeff=0.9987;MQ=88.85;MQ0=0;MQRankSum=-1.144;QD=38.84;ReadPosRankSum=2.088;VQSLOD=5.4596;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,45:50:99:1941,135,0	0/0:7,0:7:18.03:0,18,208	0/0:25,0:25:69.18:0,69,822	0/0:22,0:22:50.22:0,50,587	0/0:18,0:18:54.10:0,54,627	0/0:20,0:20:60.17:0,60,730	0/0:27,0:27:75.22:0,75,917	1/1:0,14:14:42.11:567,42,0	0/0:22,0:22:66.18:0,66,793	0/0:34,0:34:99:0,99,1209	0/0:16,0:16:45.13:0,45,545	0/0:14,0:14:39.12:0,39,483	0/0:29,0:29:84.24:0,84,1016	0/0:18,0:18:54.16:0,54,657	1/1:1,21:22:57.19:821,57,0	1/1:1,22:23:57.19:821,57,0	1/1:1,39:40:99:1555,108,0	0/0:28,0:28:78.21:0,78,950	1/1:1,21:22:63.18:875,63,0	1/1:0,19:19:57.19:819,57,0	0/0:27,0:27:72.22:0,72,882	1/1:0,24:24:66.22:950,66,0	0/0:15,0:15:39.12:0,39,483	0/0:41,0:41:99:0,123,1506	1/1:0,17:17:48.16:691,48,0	1/1:3,23:26:35.04:956,35,0	1/1:1,26:27:72.24:1036,72,0	1/1:0,10:10:27.09:389,27,0
chr10	5494146	.	AG	A	1790.81	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.164;DP=493;FS=1.968;HRun=3;HaplotypeScore=48.6208;InbreedingCoeff=0.9933;MQ=95.50;MQ0=0;MQRankSum=-3.431;QD=31.98;ReadPosRankSum=1.900;VQSLOD=3.6397;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,28:28:81.25:1004,81,0	0/0:9,0:9:27.09:0,27,389	0/0:28,0:28:81.27:0,81,1135	0/0:18,0:18:48.02:0,48,638	0/0:16,0:16:45.15:0,45,648	0/0:13,0:13:39.13:0,39,562	0/0:21,0:21:60.20:0,60,864	0/0:32,0:32:93.31:0,93,1338	0/0:18,0:18:48.16:0,48,691	0/0:18,0:18:54.18:0,54,778	0/0:7,0:7:21.07:0,21,302	0/0:14,0:13:39.13:0,39,562	0/0:10,0:10:30.10:0,30,432	0/0:26,0:26:75.24:0,75,1061	1/1:1,19:20:51.16:632,51,0	0/0:14,0:14:42.14:0,42,603	0/0:27,0:27:75.25:0,75,1080	0/0:23,0:23:69.23:0,69,993	0/0:16,0:16:39.13:0,39,561	0/0:10,0:10:30.10:0,30,432	0/0:33,0:33:96.31:0,96,1363	0/0:8,0:8:24.08:0,24,345	0/0:6,0:6:18.06:0,18,259	0/0:29,0:29:84.27:0,84,1191	1/1:0,8:8:24.08:297,24,0	0/0:17,0:17:48.16:0,48,691	0/0:12,0:12:36.10:0,36,484	0/0:12,0:12:36.12:0,36,518
chr10	5494320	.	AGTT	A	346.51	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.046;DP=163;FS=5.607;HRun=0;HaplotypeScore=32.4154;InbreedingCoeff=0.3820;MQ=109.19;MQ0=2;MQRankSum=-2.689;QD=34.65;ReadPosRankSum=-1.216;VQSLOD=2.7199;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:27.09:0,27,633	0/0:1,0:1:3.01:0,3,70	0/0:23,0:19:41.16:0,41,673	0/0:23,0:18:34.46:0,34,746	0/0:6,0:6:15.05:0,15,331	0/0:3,0:3:9.03:0,9,211	0/0:3,0:3:9.03:0,9,192	1/1:0,10:10:27.08:440,27,0	0/0:3,0:3:9.03:0,9,210	0/0:2,0:2:6.02:0,6,130	0/0:3,0:3:9.03:0,9,210	0/0:2,0:2:6.02:0,6,141	0/0:1,0:1:3.01:0,3,70	0/0:4,0:4:9:0,9,189	0/0:4,0:4:12.04:0,12,262	0/0:4,0:4:12.04:0,12,282	0/0:7,0:7:18.06:0,18,381	0/0:7,0:7:15.05:0,15,352	0/0:4,0:4:9.03:0,9,181	0/0:4,0:4:12.04:0,12,282	0/0:6,0:6:18.06:0,18,420	0/0:6,0:6:18.06:0,18,406	0/0:4,0:4:12.03:0,12,224	0/0:7,0:7:21.07:0,21,482	0/0:7,0:7:18.06:0,18,421	0/0:2,0:2:6.02:0,6,108	0/0:4,0:4:9.03:0,9,211	0/0:2,0:2:6.02:0,6,141
chr10	5494351	.	GGGA	G	60.83	PASS	AB=1.000;AC=5;AF=0.104;AN=48;BaseQRankSum=2.792;DP=214;FS=1.704;HRun=0;HaplotypeScore=34.0554;InbreedingCoeff=0.2937;MQ=83.04;MQ0=9;MQRankSum=-1.829;QD=0.92;ReadPosRankSum=-0.640;VQSLOD=1.3456;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,0:8:3.01:51,3,0	./.	0/1:52,0:19:7.50:8,0,354	0/0:63,0:19:13.02:0,13,277	0/0:2,0:2:6.02:0,6,128	./.	0/0:5,0:5:7.66:0,8,77	0/0:9,0:8:8.99:0,9,150	0/0:4,0:4:9.03:0,9,192	0/0:5,0:5:5.85:0,6,78	0/0:5,0:5:8.39:0,8,98	0/0:3,0:2:5.67:0,6,36	0/0:1,0:1:3.01:0,3,64	0/0:1,0:1:3.01:0,3,56	./.	0/0:2,0:2:6.02:0,6,128	0/0:1,0:1:1.55:0,2,4	0/0:7,0:7:11.99:0,12,196	0/0:5,0:5:12.04:0,12,211	0/0:4,0:3:9.02:0,9,154	0/0:4,0:4:12.04:0,12,257	0/0:9,0:8:17.84:0,18,383	0/0:4,0:4:9.03:0,9,177	0/0:6,0:6:15.04:0,15,257	1/1:2,4:6:6.02:101,6,0	./.	0/0:2,0:2:6.02:0,6,128	0/0:3,0:3:3.01:0,3,63
chr10	5494941	.	C	CAA	3844.71	PASS	AB=0.805;AC=18;AF=0.321;AN=56;BaseQRankSum=0.164;DP=600;FS=0.373;HRun=9;HaplotypeScore=74.8325;InbreedingCoeff=0.7996;MQ=70.54;MQ0=2;MQRankSum=-0.718;QD=18.75;ReadPosRankSum=-3.811;VQSLOD=1.4639;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,120,1277	0/0:7,0:7:18.04:0,18,192	0/1:15,0:14:10.53:11,0,158	0/0:15,0:9:7.29:0,7,100	0/0:19,0:20:45.06:0,45,534	0/0:26,0:26:63.13:0,63,670	0/0:33,0:34:92.89:0,93,944	0/1:9,0:20:23.92:117,0,24	0/0:24,0:24:69.17:0,69,734	0/0:27,0:27:48.08:0,48,511	0/0:9,0:9:21.05:0,21,224	0/0:22,0:22:60.13:0,60,631	0/0:20,0:20:54.09:0,54,563	0/0:23,0:23:63.10:0,63,643	0/0:24,0:23:57.10:0,57,595	1/1:4,13:20:38.61:526,39,0	1/1:4,0:35:67.62:235,68,0	0/0:20,0:20:47.98:0,48,479	1/1:4,14:18:48.11:671,48,0	1/1:1,15:18:50.38:559,50,0	0/0:21,0:21:51.08:0,51,534	1/1:3,10:16:29.97:356,30,0	0/0:17,0:16:39.06:0,39,415	0/0:29,0:29:78.13:0,78,802	0/0:11,0:11:30.07:0,30,319	1/1:7,17:26:48.13:696,48,0	1/1:5,21:26:42.14:629,42,0	1/1:0,2:4:3.01:46,3,0
chr10	5495847	.	GCTCCC	G	977.92	PASS	AC=8;AF=0.160;AN=50;BaseQRankSum=4.570;DP=163;FS=0.000;HRun=0;HaplotypeScore=35.4404;InbreedingCoeff=0.6185;MQ=88.75;MQ0=1;MQRankSum=-5.703;QD=25.07;ReadPosRankSum=4.120;VQSLOD=2.5385;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,17:19:18.06:362,18,0	0/0:3,0:3:6.86:0,7,88	0/0:27,0:15:26.54:0,27,426	0/0:16,0:11:27.88:0,28,274	0/0:3,0:3:1.77:0,2,3	0/0:3,0:3:7.54:0,8,52	0/0:8,0:8:20.07:0,20,182	0/0:6,0:6:18.01:0,18,161	0/0:3,0:3:9:0,9,132	0/0:2,0:2:6.01:0,6,58	0/0:2,0:2:6.02:0,6,156	0/0:5,0:5:9.01:0,9,111	1/1:2,0:2:2.74:12,3,0	0/0:5,0:4:6:0,6,85	1/1:0,13:13:27.09:545,27,0	0/0:2,0:2:5.87:0,6,40	0/0:11,1:13:6.67:0,7,230	0/0:6,0:6:15.04:0,15,332	0/0:2,0:2:6:0,6,53	./.	0/0:7,0:7:11.97:0,12,95	./.	0/0:2,0:2:2.99:0,3,25	0/0:5,0:5:11.92:0,12,88	1/1:3,2:5:14.99:197,15,0	0/0:1,0:1:0.89:0,1,2	0/0:3,0:3:9:0,9,117	./.
chr10	5497433	.	TCTGCTGCTG	T	3694.95	PASS	AB=0.600;AC=19;AF=0.380;AN=50;BaseQRankSum=7.858;DP=594;FS=1.343;HRun=0;HaplotypeScore=153.3854;InbreedingCoeff=0.7374;MQ=70.16;MQ0=7;MQRankSum=-8.675;QD=19.65;ReadPosRankSum=-0.215;VQSLOD=3.1482;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	0/0:10,0:11:33.10:0,33,1291	0/0:33,0:24:8.86:0,9,162	0/0:35,0:20:10.28:0,10,177	./.	0/0:10,0:9:3.01:0,3,131	0/0:32,0:32:63.19:0,63,2308	1/1:16,0:18:3:25,3,0	0/0:14,0:14:18.06:0,18,812	0/0:34,0:34:2.91:0,3,7	0/0:9,0:9:3.01:0,3,137	0/0:24,0:24:51.18:0,51,2162	0/0:20,0:20:36.12:0,36,1464	0/0:15,0:15:36.11:0,36,1589	1/1:13,8:21:21.07:556,21,0	1/1:14,16:30:30.10:831,30,0	0/1:6,12:18:0.92:317,0,1	0/0:37,0:37:84.25:0,84,3498	1/1:15,2:17:6.02:164,6,0	0/0:9,2:11:0.47:0,0,1	0/0:46,0:45:24.06:0,24,690	1/1:18,0:18:9.03:173,9,0	./.	0/0:25,0:26:60.18:0,60,2199	1/1:14,3:17:6.02:166,6,0	1/1:17,0:17:4.97:76,5,0	1/1:10,9:20:33.11:893,33,0	1/1:5,7:12:18.06:495,18,0
chr10	5497816	.	CACAT	C	2374.53	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=10.096;DP=849;FS=5.197;HRun=0;HaplotypeScore=140.3763;InbreedingCoeff=0.9984;MQ=63.77;MQ0=1;MQRankSum=-1.248;QD=31.24;ReadPosRankSum=2.658;VQSLOD=3.6746;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:59,0:59:99:0,139,3316	0/0:18,0:18:45.15:0,45,1123	0/0:38,0:34:72.23:0,72,1648	0/0:33,0:30:50.53:0,51,1149	0/0:36,0:36:87.28:0,87,2089	0/0:22,0:22:51.16:0,51,1201	0/0:16,0:16:39.13:0,39,982	0/0:41,0:41:87.25:0,87,2033	0/0:39,0:39:90.25:0,90,2132	0/0:39,0:39:90.31:0,90,2243	0/0:13,0:13:33.09:0,33,726	0/0:30,0:30:68.81:0,69,1620	0/0:33,0:33:66.23:0,66,1655	0/0:29,0:29:66.23:0,66,1651	0/0:40,0:40:99:0,99,2392	0/0:28,0:28:75.26:0,75,1860	0/0:41,0:41:84.29:0,84,2089	0/0:13,0:13:24.06:0,24,512	0/0:29,0:29:75.26:0,75,1855	0/0:16,0:16:39.13:0,39,958	0/0:50,0:50:99:0,120,2937	0/0:22,0:22:56.99:0,57,1383	0/0:30,0:30:63.17:0,63,1465	0/0:29,0:29:75.26:0,75,1850	0/0:29,0:29:78.27:0,78,1930	1/1:7,21:28:63.18:1026,63,0	1/1:5,27:32:63.22:1079,63,0	1/1:5,11:16:24.08:412,24,0
chr10	5498292	.	AACACAC	A	1313.60	PASS	AB=1.000;AC=27;AF=0.519;AN=52;BaseQRankSum=4.510;DP=452;FS=55.413;HRun=0;HaplotypeScore=113.2389;InbreedingCoeff=0.5969;MQ=65.24;MQ0=16;MQRankSum=-3.492;QD=5.66;ReadPosRankSum=-0.700;VQSLOD=-0.0538;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:36,14:51:3.33:367,3,0	1/1:1,2:4:9.03:163,9,0	./.	./.	0/0:6,0:7:2.14:0,2,22	1/1:8,4:14:23.90:341,24,0	1/1:16,6:21:8.71:122,9,0	0/0:21,0:21:17.95:0,18,291	1/1:11,3:13:3.01:55,3,0	0/1:11,0:11:33.44:51,0,33	1/1:5,0:6:2.50:13,2,0	1/1:6,2:9:8.39:124,8,0	1/1:7,0:9:6.68:25,7,0	1/1:6,0:7:3.26:10,3,0	0/0:13,0:15:18.06:0,18,456	0/0:15,0:15:18.06:0,18,476	1/1:12,0:16:6.02:84,6,0	1/1:12,0:11:7.41:68,7,0	0/0:13,0:12:9.03:0,9,164	0/0:5,0:5:6.02:0,6,135	1/1:22,0:26:0.71:2,1,0	0/0:7,0:7:6.02:0,6,126	0/0:6,0:9:4.56:0,5,47	1/1:19,1:27:5.67:66,6,0	0/0:7,0:10:6.49:0,6,151	0/0:21,0:21:34.65:0,35,729	0/0:14,0:14:12.04:0,12,312	0/0:8,0:7:12.04:0,12,276
chr10	5498347	.	AAG	A	59.21	PASS	AB=0.885;AC=5;AF=0.089;AN=56;BaseQRankSum=-1.067;DP=368;FS=11.748;HRun=0;HaplotypeScore=92.3838;InbreedingCoeff=0.0904;MQ=42.49;MQ0=18;MQRankSum=-2.578;QD=1.44;ReadPosRankSum=-2.017;VQSLOD=0.7761;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:32:45.14:0,45,813	0/0:3,0:3:9.03:0,9,159	0/0:13,0:3:9.03:0,9,183	0/0:24,0:9:24.08:0,24,478	0/0:11,0:10:6.02:0,6,122	0/0:13,0:13:16.40:0,16,281	0/0:18,1:17:28.31:0,28,514	0/0:17,0:17:51.17:0,51,1013	0/1:11,1:10:16.96:17,0,289	0/1:13,3:14:97.93:98,0,389	1/1:5,0:5:2.99:23,3,0	0/0:10,0:10:24.97:0,25,461	0/0:13,0:12:26.68:0,27,470	0/0:7,2:8:15:0,15,243	0/0:12,0:9:21.07:0,21,401	0/0:17,0:16:14.68:0,15,208	0/0:15,0:13:5.31:0,5,356	0/1:7,1:7:30.72:31,0,286	0/0:14,0:12:8.21:0,8,634	0/0:4,1:5:6.02:0,6,92	0/0:16,1:13:11.91:0,12,201	0/0:3,0:3:2.99:0,3,61	0/0:4,0:4:3.01:0,3,61	0/0:21,3:21:23.69:0,24,363	0/0:7,0:6:9.26:0,9,184	0/0:16,0:16:43.69:0,44,786	0/0:20,0:20:33.11:0,33,669	0/0:7,0:6:9.03:0,9,172
chr10	5498363	.	A	AGAGAGGGAGAGAGG	4379.52	PASS	AB=0.964;AC=38;AF=0.704;AN=54;BaseQRankSum=-0.516;DP=457;FS=1.391;HRun=0;HaplotypeScore=177.5140;InbreedingCoeff=-0.1168;MQ=41.63;MQ0=16;MQRankSum=-2.119;QD=10.23;ReadPosRankSum=-1.289;VQSLOD=3.7324;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:40,0:38:48.70:49,0,108	1/1:4,0:4:1.72:3,2,0	0/0:8,0:3:8.88:0,9,61	0/0:17,0:8:11.97:0,12,132	0/1:26,0:22:4.14:21,0,4	1/1:17,0:17:4.10:15,4,0	1/1:21,0:19:31.62:389,32,0	1/1:32,0:31:66.07:754,66,0	0/1:22,0:19:6.08:219,0,6	1/1:25,0:24:21.32:452,21,0	1/1:5,0:5:3.37:9,3,0	1/1:12,0:12:22.73:261,23,0	1/1:12,0:11:18.24:138,18,0	1/1:15,0:14:12.77:85,13,0	0/1:20,0:17:25.93:184,0,26	0/1:6,17:24:9.61:276,0,10	0/1:17,0:15:10.21:286,0,10	0/1:10,0:10:41.59:42,0,68	1/1:21,0:20:12.45:292,12,0	0/1:6,0:6:31.95:47,0,32	1/1:17,0:14:5.42:105,5,0	1/1:4,0:3:3.01:54,3,0	./.	0/1:24,0:21:30.56:31,0,59	1/1:7,0:5:6.96:110,7,0	0/1:19,0:19:36.10:373,0,36	0/1:19,0:19:63.93:155,0,64	0/1:9,0:6:24.45:31,0,24
chr10	5498669	.	C	CTTT	3661.67	PASS	AB=1.000;AC=51;AF=0.944;AN=54;BaseQRankSum=0.023;DP=233;FS=4.956;HRun=12;HaplotypeScore=64.5970;InbreedingCoeff=0.2524;MQ=83.81;MQ0=1;MQRankSum=-2.490;QD=16.95;ReadPosRankSum=-1.031;VQSLOD=1.7181;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,6:19:25.59:372,26,0	./.	1/1:15,0:12:0.51:9,1,0	0/0:17,0:15:3.33:0,3,35	1/1:8,0:9:8.88:59,9,0	1/1:4,4:9:21.05:322,21,0	1/1:8,1:9:14.94:171,15,0	1/1:13,2:20:5.87:288,6,0	1/1:5,1:7:15.05:209,15,0	1/1:2,0:3:2.99:23,3,0	1/1:4,0:4:3.01:55,3,0	1/1:4,1:5:9.03:148,9,0	1/1:4,1:5:6.01:80,6,0	1/1:5,1:6:13.57:161,14,0	1/1:5,0:7:9.03:122,9,0	1/1:6,0:7:7.57:84,8,0	1/1:11,6:17:2.47:516,2,0	1/1:8,1:10:18.03:238,18,0	1/1:12,0:13:18.03:225,18,0	1/1:5,0:5:4.56:47,5,0	1/1:2,3:5:8.06:79,8,0	1/1:3,0:3:6.02:82,6,0	1/1:2,2:4:5.05:61,5,0	1/1:3,1:6:9:125,9,0	1/1:1,1:2:6.02:83,6,0	1/1:11,0:10:8.98:99,9,0	1/1:5,0:4:1.25:3,1,0	0/1:3,0:3:0:0,0,0
chr10	5498699	.	A	ACCCAGGGCCTTG	13932.08	PASS	AB=0.836;AC=41;AF=0.854;AN=48;BaseQRankSum=-0.558;DP=209;FS=7.662;HRun=0;HaplotypeScore=65.4709;InbreedingCoeff=0.2551;MQ=56.05;MQ0=2;MQRankSum=-1.018;QD=95.43;ReadPosRankSum=2.531;VQSLOD=3.8409;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,4:6:3.01:187,3,0	./.	0/0:24,0:15:35.37:0,35,1265	0/0:34,0:13:17.87:0,18,867	1/1:2,4:6:9.03:517,9,0	1/1:3,4:6:12.04:608,12,0	1/1:2,6:8:24.08:1403,24,0	0/1:23,2:24:99:1191,0,1148	1/1:0,2:2:6.02:374,6,0	0/1:3,2:5:99:510,0,217	./.	1/1:2,2:4:12.04:673,12,0	1/1:2,3:6:12.04:617,12,0	1/1:0,3:2:6.02:374,6,0	1/1:2,0:2:6.02:144,6,0	1/1:1,2:3:6.02:282,6,0	1/1:8,4:13:33.02:1448,33,0	1/1:2,3:5:15.05:937,15,0	0/1:11,2:12:99:704,0,677	1/1:0,1:1:3.01:187,3,0	./.	1/1:2,2:4:6.02:332,6,0	1/1:2,0:2:3.01:115,3,0	1/1:0,5:5:9.03:356,9,0	./.	1/1:5,7:11:33.11:1780,33,0	1/1:4,5:7:21.05:1057,21,0	1/1:2,0:1:3.01:135,3,0
chr10	5498747	.	ACTC	A	1009.87	PASS	AC=30;AF=0.652;AN=46;BaseQRankSum=-1.476;DP=154;FS=0.779;HRun=0;HaplotypeScore=51.8991;InbreedingCoeff=0.7038;MQ=70.24;MQ0=9;MQRankSum=-2.634;QD=17.41;ReadPosRankSum=-1.694;VQSLOD=2.9993;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:23.94:0,24,228	./.	0/0:18,0:6:15.05:0,15,241	0/0:19,0:11:11.69:0,12,132	./.	1/1:3,1:4:5.51:61,6,0	1/1:1,1:3:5.85:65,6,0	1/1:2,0:11:26.92:237,27,0	1/1:1,0:3:8.59:45,9,0	1/1:2,0:2:2.97:20,3,0	1/1:3,0:2:2.97:20,3,0	1/1:5,0:5:8.30:42,8,0	1/1:0,0:2:5.77:33,6,0	1/1:2,0:2:2.74:12,3,0	0/0:2,0:2:6.02:0,6,91	1/1:1,3:4:9.03:155,9,0	0/0:12,0:12:25.91:0,26,183	1/1:1,1:3:5.81:66,6,0	1/1:4,2:6:17.87:182,18,0	1/1:1,3:4:8.98:122,9,0	./.	1/1:0,1:1:3.01:51,3,0	./.	1/1:2,1:2:5.97:70,6,0	./.	0/0:14,0:13:29.50:0,30,145	0/0:10,0:11:22.14:0,22,102	0/0:4,0:4:9.51:0,10,33
chr10	5498748	.	CT	C	825.02	PASS	AB=0.840;AC=33;AF=0.717;AN=46;BaseQRankSum=-1.327;DP=150;FS=21.095;HRun=1;HaplotypeScore=46.7744;InbreedingCoeff=0.3889;MQ=71.14;MQ0=9;MQRankSum=-2.434;QD=8.33;ReadPosRankSum=0.106;VQSLOD=-0.7360;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:8,4:12:25.42:65,0,25	./.	0/0:18,0:6:14.05:0,14,131	0/1:21,0:11:10.95:11,0,49	./.	1/1:3,0:3:3.86:23,4,0	1/1:2,0:2:5.97:44,6,0	1/1:10,1:11:26.17:167,26,0	1/1:3,0:3:8.91:63,9,0	1/1:2,0:2:2.97:20,3,0	1/1:3,0:2:2.97:20,3,0	1/1:5,1:5:11.88:83,12,0	1/1:2,0:2:5.95:42,6,0	1/1:0,1:1:3.01:30,3,0	0/0:2,0:2:5.96:0,6,45	1/1:4,0:4:8.93:65,9,0	0/1:7,3:10:22.31:69,0,22	1/1:3,0:3:5.97:44,6,0	1/1:6,1:6:17.54:111,18,0	1/1:4,0:4:8.91:61,9,0	./.	1/1:1,0:1:2.98:21,3,0	./.	1/1:3,0:2:5.93:40,6,0	./.	0/0:14,0:13:20.41:0,20,138	0/0:11,0:11:13:0,13,71	0/0:4,0:4:5.90:0,6,29
chr10	5498749	.	TCC	T	871.92	PASS	AB=0.923;AC=32;AF=0.762;AN=42;BaseQRankSum=-0.388;DP=155;FS=4.494;HRun=11;HaplotypeScore=47.8671;InbreedingCoeff=0.2843;MQ=73.16;MQ0=9;MQRankSum=-1.694;QD=7.72;ReadPosRankSum=2.558;VQSLOD=-0.5050;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:13:23.21:0,23,98	./.	0/0:20,0:8:20.89:0,21,232	0/1:22,2:13:6.86:7,0,115	./.	0/1:3,0:3:5.37:5,0,15	1/1:2,0:2:5.63:29,6,0	1/1:11,0:11:14.19:63,14,0	1/1:3,0:3:5.97:45,6,0	./.	./.	1/1:6,0:5:5.87:39,6,0	0/1:3,0:3:13.80:19,0,14	1/1:1,0:1:3:26,3,0	0/0:2,0:2:3.47:0,3,30	1/1:4,0:4:8.04:33,8,0	0/1:7,1:10:28.90:43,0,29	1/1:3,0:3:5.67:34,6,0	1/1:7,0:6:7.06:29,7,0	1/1:4,0:4:5.35:22,5,0	./.	1/1:1,0:1:2.68:11,3,0	./.	1/1:3,0:2:2.68:11,3,0	./.	1/1:5,8:12:24.05:254,24,0	1/1:2,8:11:14.99:211,15,0	1/1:0,4:4:12.03:128,12,0
chr10	5499074	.	A	AT	1158.92	PASS	AB=0.897;AC=20;AF=0.400;AN=50;BaseQRankSum=0.834;DP=150;FS=0.000;HRun=1;HaplotypeScore=32.1613;InbreedingCoeff=0.4548;MQ=71.55;MQ0=0;MQRankSum=0.399;QD=12.33;ReadPosRankSum=3.390;VQSLOD=2.0860;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,7:7:3.01:43,3,0	./.	0/1:10,0:5:1.42:1,0,62	0/1:9,0:8:0.93:1,0,17	0/0:2,0:2:2.99:0,3,24	0/0:4,0:4:9.03:0,9,116	0/0:15,0:15:24.02:0,24,276	0/0:5,0:5:9.03:0,9,116	0/0:3,0:3:9.03:0,9,116	0/0:5,0:5:8.62:0,9,87	0/0:1,0:1:3:0,3,25	0/0:3,0:3:5.98:0,6,47	0/0:3,0:3:9.03:0,9,112	0/0:3,0:3:6.02:0,6,77	1/1:13,0:13:33.88:305,34,0	0/1:6,0:6:35.04:35,0,40	1/1:4,1:5:11.93:141,12,0	./.	1/1:0,5:5:15.05:211,15,0	1/1:1,1:2:1.25:3,1,0	0/0:4,0:4:3.01:0,3,39	1/1:2,0:2:3.01:44,3,0	0/0:3,0:3:6.02:0,6,77	0/0:1,0:2:5.95:0,6,57	1/1:12,1:13:35.47:306,35,0	1/1:1,8:9:15.05:209,15,0	0/1:3,7:10:11.30:21,0,11	./.
chr10	5499331	.	TCTGTGAGCCCCGTGAGCC	T	7661.83	PASS	AB=1.000;AC=44;AF=0.880;AN=50;BaseQRankSum=3.047;DP=513;FS=14.710;HRun=0;HaplotypeScore=235.6924;InbreedingCoeff=-0.0810;MQ=64.25;MQ0=0;MQRankSum=-0.694;QD=17.78;ReadPosRankSum=1.208;VQSLOD=2.0033;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:1.72:0,2,4	1/1:3,1:4:3.01:144,3,0	./.	./.	1/1:8,3:11:3.01:136,3,0	1/1:16,12:28:15.05:713,15,0	1/1:31,0:32:6.01:72,6,0	1/1:19,0:19:3:27,3,0	1/1:11,4:15:6.02:288,6,0	1/1:11,4:15:15.01:495,15,0	1/1:3,3:6:6.02:287,6,0	1/1:12,12:24:15.05:716,15,0	1/1:9,4:13:9.03:426,9,0	1/1:17,8:25:15.05:720,15,0	1/1:21,0:21:6.02:251,6,0	0/1:22,0:22:2.91:684,0,3	1/1:27,0:27:4.27:279,4,0	1/1:13,0:13:7.25:240,7,0	1/1:27,0:27:12.01:446,12,0	./.	1/1:34,0:34:2.58:24,3,0	1/1:13,0:13:3.48:118,3,0	1/1:5,2:7:3.01:144,3,0	1/1:12,6:18:7.25:411,7,0	1/1:21,0:21:3.01:50,3,0	0/1:9,0:9:17.93:64,0,18	0/1:18,0:18:23:531,0,23	0/1:9,0:9:7.94:394,0,8
chr10	5499360	.	CGTGAGCCCTGTGAGCCCCGTGAGCCCTGTGAGCCCT	C	807.66	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=2.680;DP=481;FS=7.649;HRun=0;HaplotypeScore=361.3353;InbreedingCoeff=0.6164;MQ=53.28;MQ0=3;MQRankSum=2.002;QD=8.88;ReadPosRankSum=-0.872;VQSLOD=0.4883;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:20:6.82:106,7,0	0/0:3,0:3:9.03:0,9,519	0/0:16,0:10:25.88:0,26,947	0/0:12,0:11:8.69:0,9,897	0/0:12,0:12:20.83:0,21,998	0/0:22,0:22:39.12:0,39,1698	0/0:32,0:32:89.11:0,89,4708	0/0:11,0:11:33.11:0,33,1876	0/0:17,0:17:42.14:0,42,2151	0/0:10,0:9:24:0,24,1316	0/0:8,0:8:21.07:0,21,1024	0/0:29,0:29:63.20:0,63,3013	0/0:15,0:15:32.77:0,33,1621	0/0:22,0:22:47.37:0,47,2270	1/1:9,16:25:6.02:564,6,0	0/0:22,0:22:39.12:0,39,1436	0/0:21,0:21:28.32:0,28,1223	0/0:15,0:15:42.14:0,42,2533	0/1:24,0:22:54.96:55,0,1326	0/0:10,0:10:20.60:0,21,1114	0/0:34,0:33:63.60:0,64,2844	0/0:14,0:14:8.01:0,8,313	0/0:3,0:3:6.02:0,6,342	0/0:20,0:20:39.62:0,40,1612	1/1:5,17:22:3.01:207,3,0	0/0:9,0:9:27.09:0,27,1797	0/0:22,0:22:31.02:0,31,1285	0/0:8,0:8:18.06:0,18,831
chr10	5499378	.	CGTGAGCCCTGTGAGCCCT	C	8125.15	PASS	AB=1.000;AC=35;AF=0.625;AN=56;BaseQRankSum=10.821;DP=474;FS=3.142;HRun=0;HaplotypeScore=192.7194;InbreedingCoeff=-0.0980;MQ=59.17;MQ0=2;MQRankSum=-5.125;QD=20.94;ReadPosRankSum=5.298;VQSLOD=3.4662;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:22:63.87:378,64,0	0/1:3,0:3:37.97:117,0,38	0/0:23,0:16:27.57:0,28,418	0/0:17,0:14:18.35:0,18,294	0/1:10,0:10:98.21:98,0,122	0/1:20,0:20:99:585,0,131	0/1:23,0:23:24.24:24,0,392	0/0:16,0:16:46.30:0,46,427	0/1:17,0:17:99:214,0,238	0/1:9,0:8:66.93:366,0,67	0/1:11,0:11:99:224,0,163	0/1:26,0:26:99:571,0,263	0/1:16,0:16:99:339,0,139	0/1:20,0:20:99:588,0,183	1/1:16,0:16:6.02:272,6,0	1/1:1,18:19:15.52:774,16,0	1/1:4,17:21:6:309,6,0	0/1:16,0:16:99:147,0,213	1/1:2,23:23:65.69:819,66,0	1/1:13,0:12:29.70:285,30,0	0/0:30,0:30:1.91:0,2,447	1/1:2,13:15:3.95:138,4,0	0/1:5,0:5:62.96:114,0,63	0/1:19,0:19:99:326,0,174	1/1:17,0:17:3.01:61,3,0	1/1:12,0:12:32.78:278,33,0	1/1:2,23:25:12.16:627,12,0	1/1:2,6:8:9.03:471,9,0
chr10	5499780	.	TTCTCTTTCTC	T	1646.78	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=5.733;DP=531;FS=0.778;HRun=0;HaplotypeScore=172.4101;InbreedingCoeff=0.8417;MQ=87.73;MQ0=4;MQRankSum=-4.108;QD=18.30;ReadPosRankSum=-1.187;VQSLOD=2.7290;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:42.10:0,42,1509	0/0:5,0:5:12.04:0,12,568	0/1:39,0:30:0.85:1,0,1212	0/0:54,0:34:31.38:0,31,1026	0/0:25,0:25:51.17:0,51,2011	0/0:22,0:22:57.19:0,57,2260	0/0:23,0:23:57.15:0,57,2039	0/0:18,0:18:26.46:0,26,242	0/0:10,0:10:21:0,21,592	0/0:20,0:20:51.17:0,51,2134	0/0:7,0:7:6.02:0,6,168	0/0:18,0:18:45.12:0,45,1713	0/0:22,0:22:29.58:0,30,1061	0/0:11,0:11:27.04:0,27,1003	0/0:22,0:22:51.18:0,51,2113	0/0:24,0:24:27.09:0,27,1114	0/0:17,0:16:38.96:0,39,937	0/0:16,0:15:17.65:0,18,693	0/0:10,0:10:21.07:0,21,848	0/0:21,0:21:54.19:0,54,2257	0/0:7,0:7:15.52:0,16,596	0/0:10,0:10:21.07:0,21,833	0/0:16,0:16:34.93:0,35,1505	0/0:15,0:15:29.88:0,30,1121	0/0:24,0:24:33.11:0,33,1067	1/1:6,9:15:24.08:584,24,0	1/1:9,16:25:36.12:829,36,0	1/1:3,8:11:12.04:371,12,0
chr10	5499792	.	CTCTT	C	685.36	PASS	AB=1.000;AC=6;AF=0.107;AN=56;BaseQRankSum=4.294;DP=574;FS=26.912;HRun=0;HaplotypeScore=139.2384;InbreedingCoeff=0.6293;MQ=75.41;MQ0=11;MQRankSum=-5.036;QD=10.88;ReadPosRankSum=-0.660;VQSLOD=1.5313;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:45.05:0,45,1032	0/0:8,0:8:18.02:0,18,424	0/0:55,0:29:35.67:0,36,1097	0/0:71,0:29:6.57:0,7,667	0/0:27,0:25:51.16:0,51,1234	0/0:23,0:23:61.04:0,61,1461	0/0:30,0:30:80.67:0,81,1665	1/1:13,5:18:44.87:534,45,0	0/0:13,0:13:23.94:0,24,392	0/0:22,0:21:60.19:0,60,1411	0/0:6,0:6:6.01:0,6,106	0/0:19,0:18:48.05:0,48,1055	0/0:22,0:22:38.90:0,39,821	0/0:10,0:10:27.04:0,27,611	0/0:21,0:21:54.14:0,54,1393	0/0:24,0:23:30.10:0,30,728	0/0:19,0:18:41.91:0,42,708	0/0:13,0:12:17.63:0,18,411	0/0:11,0:11:8.09:0,8,598	0/0:25,0:25:63.01:0,63,1451	0/0:8,0:7:15.05:0,15,403	0/0:13,0:12:24.04:0,24,531	0/0:18,0:17:37.93:0,38,896	0/0:14,0:14:30.01:0,30,696	0/0:18,0:18:33.11:0,33,757	0/1:14,0:13:28.29:74,0,28	0/1:22,0:22:1.80:106,0,2	1/1:9,0:9:12:104,12,0
chr10	5499795	.	T	TGTG	945.43	PASS	AB=0.941;AC=5;AF=0.089;AN=56;BaseQRankSum=5.902;DP=578;FS=0.733;HRun=0;HaplotypeScore=136.2761;InbreedingCoeff=0.3593;MQ=68.55;MQ0=14;MQRankSum=-5.208;QD=13.32;ReadPosRankSum=1.267;VQSLOD=3.4226;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:43.35:0,43,749	0/0:9,0:9:14.74:0,15,282	0/0:54,0:25:66.77:0,67,928	0/0:70,0:25:46.61:0,47,750	0/0:25,0:23:51.14:0,51,921	0/0:21,0:21:58.07:0,58,1042	0/0:30,0:30:76:0,76,1314	0/1:24,0:24:38.20:38,0,385	0/0:13,0:13:20.99:0,21,316	0/0:22,0:20:60.20:0,60,1108	0/0:5,0:5:6.01:0,6,117	0/0:17,0:16:48.11:0,48,839	0/0:20,0:20:38.80:0,39,665	0/0:11,0:11:27.04:0,27,439	0/0:21,0:21:51.14:0,51,950	0/0:25,0:23:33.04:0,33,569	0/0:20,0:19:41.41:0,41,555	0/0:13,0:12:18.06:0,18,330	0/0:13,0:13:36.12:0,36,683	0/0:27,0:26:63.03:0,63,1070	0/0:7,0:6:15.05:0,15,286	0/0:16,0:13:21.06:0,21,391	0/0:18,0:17:37.94:0,38,661	0/0:14,0:14:29.66:0,30,526	0/0:17,0:17:33.11:0,33,585	0/1:14,1:14:99:365,0,101	0/1:20,3:23:5.82:548,0,6	1/1:9,0:9:12.01:113,12,0
chr10	5499804	.	CTGTGT	C	738.65	PASS	AB=0.914;AC=7;AF=0.125;AN=56;BaseQRankSum=5.715;DP=553;FS=4.543;HRun=0;HaplotypeScore=139.4053;InbreedingCoeff=0.1231;MQ=58.54;MQ0=15;MQRankSum=-3.567;QD=4.65;ReadPosRankSum=1.378;VQSLOD=2.5689;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:0.11:0,0,725	0/0:9,0:9:20.87:0,21,469	0/0:47,0:18:38.71:0,39,958	0/1:60,1:18:7.03:7,0,471	0/0:22,0:20:42.14:0,42,1080	0/0:21,0:20:58.07:0,58,1276	0/0:29,0:29:69.19:0,69,1436	0/1:19,6:24:99:304,0,787	0/0:10,0:10:15.05:0,15,308	0/0:22,0:20:60.18:0,60,1458	0/0:3,0:3:3.01:0,3,31	0/0:16,0:15:38.96:0,39,794	0/0:20,0:19:33.16:0,33,719	0/0:10,0:10:24.55:0,25,597	0/0:22,0:22:57.19:0,57,1280	0/0:25,0:23:30.10:0,30,747	0/1:18,0:17:18.87:19,0,394	0/0:12,0:11:14.95:0,15,348	0/0:15,0:14:30.37:0,30,880	0/0:28,0:26:54.11:0,54,1331	0/0:7,0:6:15.04:0,15,282	0/0:15,0:12:21.07:0,21,494	0/0:18,0:17:34.93:0,35,922	0/0:13,0:12:23.95:0,24,532	0/0:13,0:13:24.08:0,24,531	0/1:17,2:18:99:169,0,260	0/1:24,4:28:56:281,0,56	1/1:8,0:8:11.94:89,12,0
chr10	5499805	.	TGTG	T	269.38	PASS	AB=0.958;AC=7;AF=0.125;AN=56;BaseQRankSum=5.765;DP=548;FS=0.000;HRun=0;HaplotypeScore=128.1718;InbreedingCoeff=0.0741;MQ=57.46;MQ0=18;MQRankSum=-2.656;QD=2.34;ReadPosRankSum=1.083;VQSLOD=2.2101;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:15,2:17:14.53:15,0,662	0/0:9,0:9:21.07:0,21,447	0/0:44,1:16:28.28:0,28,783	0/0:59,1:18:4.03:0,4,427	0/0:22,0:20:42.06:0,42,955	0/0:21,0:20:58.08:0,58,1190	0/0:29,0:29:69.17:0,69,1360	0/1:26,0:24:99:183,0,859	0/0:10,0:10:15.05:0,15,297	0/0:22,0:20:60.13:0,60,1264	0/0:3,0:3:3.01:0,3,41	0/0:16,0:15:39.13:0,39,782	0/0:20,0:19:33.51:0,34,684	0/0:10,0:10:24.55:0,25,553	0/0:22,0:22:57.19:0,57,1160	0/0:24,0:22:30.10:0,30,664	0/1:15,2:16:22.76:23,0,351	0/0:11,0:10:15.01:0,15,323	0/0:14,0:13:39.12:0,39,851	0/0:26,0:24:54.11:0,54,1151	0/0:8,0:6:15.05:0,15,280	0/0:15,0:12:21.07:0,21,439	0/0:18,0:17:34.93:0,35,792	0/0:13,0:12:24:0,24,500	0/0:14,0:13:24.08:0,24,472	0/1:19,0:18:46.79:47,0,365	0/1:28,0:28:99:115,0,154	1/1:8,0:8:4.93:12,5,0
chr10	5499809	.	TTCTCTC	T	842.21	PASS	AB=0.922;AC=25;AF=0.543;AN=46;BaseQRankSum=-3.156;DP=535;FS=4.930;HRun=0;HaplotypeScore=139.0489;InbreedingCoeff=0.2279;MQ=53.56;MQ0=20;MQRankSum=3.267;QD=3.41;ReadPosRankSum=5.001;VQSLOD=2.1115;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:0:0,0,0	0/1:8,1:9:32.37:32,0,59	./.	./.	1/1:19,1:18:0.28:0,0,0	1/1:20,1:21:11.91:147,12,0	0/1:27,0:28:76.24:112,0,76	0/0:26,0:24:38.85:0,39,505	0/1:10,0:10:0:0,0,0	0/1:19,0:18:83.60:143,0,84	1/1:3,0:3:2.90:61,3,0	1/1:12,1:14:9.01:147,9,0	0/1:17,0:17:51.55:52,0,53	0/1:13,0:13:58.06:59,0,58	0/1:12,8:22:0.04:0,0,0	0/0:24,0:22:3.01:0,3,75	1/1:12,0:15:2.73:10,3,0	1/1:7,5:11:3.48:56,3,0	0/0:16,0:14:21.07:0,21,385	0/0:25,0:24:6:0,6,97	1/1:7,0:6:2.88:61,3,0	./.	1/1:16,2:17:1.24:3,1,0	1/1:12,0:12:7.27:95,7,0	./.	0/0:17,0:18:28.03:0,28,663	0/0:24,0:25:23.37:0,23,381	./.
chr10	5499839	.	C	CTGTGTGTG	1280.03	PASS	AB=0.866;AC=23;AF=0.479;AN=48;BaseQRankSum=0.679;DP=328;FS=10.473;HRun=0;HaplotypeScore=104.0373;InbreedingCoeff=0.0483;MQ=36.39;MQ0=18;MQRankSum=0.190;QD=7.07;ReadPosRankSum=-0.154;VQSLOD=1.1954;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:5:2.76:0,3,13	0/1:3,0:7:16.07:213,0,16	./.	0/0:15,0:1:3.01:0,3,83	0/1:7,0:6:0:1,0,0	1/1:13,0:11:3.90:58,4,0	0/1:12,0:12:76.72:82,0,77	0/0:28,0:25:29.30:0,29,703	0/1:3,0:12:0:0,0,0	0/1:9,2:10:31.85:270,0,32	1/1:3,0:3:3.01:36,3,0	1/1:8,0:8:8.75:75,9,0	1/1:6,9:13:3.03:248,3,0	0/1:8,1:9:9.92:181,0,10	1/1:15,0:15:0.47:2,0,0	0/0:20,0:18:3.01:0,3,75	0/1:10,0:10:14.20:42,0,14	0/0:6,0:6:1.55:0,2,4	0/1:17,0:13:65.69:66,0,559	0/0:17,0:15:6:0,6,97	0/0:7,0:5:2.27:0,2,8	./.	1/1:4,9:12:1.55:4,2,0	1/1:9,0:8:5.74:94,6,0	./.	0/0:14,0:12:34.85:0,35,570	0/1:18,0:18:40.07:40,0,167	./.
chr10	5499845	.	C	CTCTCTGTGTGTGTG	2940.33	PASS	AB=0.950;AC=20;AF=0.435;AN=46;BaseQRankSum=-0.714;DP=305;FS=4.711;HRun=0;HaplotypeScore=109.8140;InbreedingCoeff=0.0561;MQ=36.00;MQ0=14;MQRankSum=-4.996;QD=15.64;ReadPosRankSum=1.122;VQSLOD=2.0899;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:4,0:4:0:0,0,0	0/1:6,0:6:12.87:196,0,13	0/0:5,0:1:3.01:0,3,61	0/0:9,0:3:6.02:0,6,150	0/1:9,0:7:0.04:0,0,0	0/0:12,0:10:8.63:0,9,76	0/1:18,0:18:21.07:21,0,92	1/1:25,0:22:39.06:559,39,0	./.	0/1:10,0:9:93.21:158,0,93	0/0:4,0:4:2.83:0,3,28	0/0:6,0:6:6.01:0,6,56	0/1:13,0:11:16.20:139,0,16	0/1:8,0:8:1.30:137,0,1	1/1:15,0:15:0.94:2,1,0	./.	1/1:10,0:10:3.05:68,3,0	0/0:6,0:6:3.01:0,3,32	1/1:10,2:13:1.56:875,2,0	0/1:4,4:14:0:0,0,0	0/0:6,0:4:2.19:0,2,27	./.	0/0:12,0:11:2.84:0,3,14	0/1:8,0:7:14.88:26,0,15	./.	0/1:12,0:12:99:292,0,111	1/1:12,0:17:22.27:594,22,0	./.
chr10	5500239	.	GAAA	G	1051.13	PASS	AB=0.717;AC=32;AF=0.762;AN=42;BaseQRankSum=4.410;DP=149;FS=0.000;HRun=4;HaplotypeScore=34.8422;InbreedingCoeff=0.3980;MQ=72.40;MQ0=8;MQRankSum=-5.701;QD=13.48;ReadPosRankSum=-0.563;VQSLOD=-0.4879;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,4:11:20.42:220,20,0	./.	0/0:35,0:18:35.64:0,36,723	0/0:23,0:14:29.72:0,30,685	./.	1/1:3,2:4:3.01:38,3,0	1/1:2,4:6:12.51:174,13,0	1/1:1,1:1:3.01:40,3,0	1/1:1,1:2:3.01:38,3,0	1/1:3,1:3:3.12:40,3,0	./.	1/1:2,3:5:11.98:131,12,0	1/1:1,1:2:3.01:53,3,0	1/1:1,2:3:3.73:71,4,0	1/1:1,0:1:2.94:18,3,0	0/1:4,1:5:0.71:32,0,1	1/1:5,1:6:8.65:92,9,0	1/1:0,4:4:3.01:36,3,0	1/1:6,1:5:4.13:46,4,0	./.	0/0:4,2:5:0.94:0,1,1	0/1:1,2:3:0:0,0,0	./.	1/1:1,4:5:3.01:36,3,0	./.	1/1:5,2:7:11.15:106,11,0	0/0:2,0:2:2.49:0,2,7	./.
chr10	5500274	.	GGTGGA	G	331.88	PASS	AB=0.915;AC=29;AF=0.630;AN=46;BaseQRankSum=2.171;DP=155;FS=23.179;HRun=0;HaplotypeScore=32.2332;InbreedingCoeff=0.1128;MQ=36.17;MQ0=31;MQRankSum=2.375;QD=3.25;ReadPosRankSum=1.121;VQSLOD=0.2099;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:14,1:11:10.70:41,11,0	1/1:0,1:1:1.25:3,1,0	0/0:18,0:2:2.34:0,2,20	./.	./.	1/1:7,0:7:3.47:29,3,0	0/1:6,0:6:3.52:42,0,4	0/1:9,1:9:11.10:44,0,11	1/1:3,1:4:5.61:45,6,0	1/1:7,1:5:8:67,8,0	1/1:2,1:2:2.60:10,3,0	0/1:4,0:2:7.29:7,0,10	1/1:1,0:1:2.88:15,3,0	1/1:1,1:1:3:28,3,0	1/1:3,0:2:2.60:10,3,0	0/0:2,0:2:1.55:0,2,4	0/1:14,0:11:14.08:14,0,16	0/0:2,0:2:4.23:0,4,24	0/0:7,0:5:1.82:0,2,11	./.	1/1:16,1:13:2.25:14,2,0	0/0:4,0:3:0.14:0,0,1	0/1:1,1:2:14.72:27,0,15	./.	1/1:3,0:2:2.68:11,3,0	1/1:1,1:2:5.50:47,6,0	0/0:2,0:2:2.80:0,3,13	./.
chr10	5500784	.	A	AGCC	16063.32	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=12.101;DP=419;FS=11.286;HRun=0;HaplotypeScore=163.7765;InbreedingCoeff=0.9760;MQ=92.52;MQ0=0;MQRankSum=-13.342;QD=48.09;ReadPosRankSum=5.715;VQSLOD=6.3886;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,33:36:89.51:1525,90,0	1/1:0,4:4:12.04:200,12,0	0/0:29,0:29:84.29:0,84,1511	0/0:23,0:23:66.23:0,66,1190	1/1:1,18:19:35.88:603,36,0	1/1:2,13:15:37.74:700,38,0	1/1:1,19:20:56.98:1017,57,0	0/0:33,0:33:90.30:0,90,1649	1/1:1,11:12:36.12:644,36,0	1/1:2,14:16:42.08:788,42,0	1/1:0,8:8:21.07:348,21,0	1/1:1,18:19:57.20:1026,57,0	1/1:0,11:11:33.11:591,33,0	1/1:0,11:11:33.11:588,33,0	1/1:0,13:13:39.13:701,39,0	1/1:2,8:10:27.06:514,27,0	1/1:0,14:14:36.12:641,36,0	1/1:0,9:9:27.09:502,27,0	1/1:0,12:12:36.12:673,36,0	1/1:0,7:7:21.07:377,21,0	1/1:0,8:8:24.08:398,24,0	1/1:1,7:8:21.04:366,21,0	1/1:0,8:8:21.07:340,21,0	1/1:1,6:7:18.06:290,18,0	1/1:2,13:15:42.14:731,42,0	1/1:1,18:19:54.14:954,54,0	1/1:3,23:26:69.13:1225,69,0	1/1:0,6:6:18.06:321,18,0
chr10	5500785	.	T	TGG	13700.42	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=12.543;DP=479;FS=10.842;HRun=0;HaplotypeScore=201.7069;InbreedingCoeff=0.9785;MQ=86.51;MQ0=0;MQRankSum=-13.122;QD=34.60;ReadPosRankSum=5.558;VQSLOD=5.2775;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,33:39:98.19:1209,98,0	1/1:0,4:4:12.04:152,12,0	0/0:28,0:28:78.26:0,78,1220	0/0:23,0:23:66.22:0,66,1054	1/1:6,18:24:29.86:415,30,0	1/1:4,13:17:48.09:633,48,0	1/1:8,19:27:72.22:977,72,0	0/0:32,0:32:93.31:0,93,1494	1/1:1,11:12:36.05:476,36,0	1/1:4,13:18:45.05:637,45,0	1/1:0,8:8:18.71:238,19,0	1/1:5,18:23:66.21:896,66,0	1/1:0,11:11:33.11:449,33,0	1/1:2,11:13:39.13:524,39,0	1/1:0,13:13:39.13:533,39,0	1/1:3,8:11:29.93:402,30,0	1/1:7,14:21:54.15:723,54,0	1/1:2,9:11:30.10:426,30,0	1/1:3,12:15:39.13:560,39,0	1/1:3,7:10:30.08:378,30,0	1/1:4,8:12:29.66:348,30,0	1/1:3,7:10:27.05:334,27,0	1/1:0,8:8:18.71:238,19,0	1/1:4,6:10:20.99:261,21,0	1/1:3,13:16:41.35:537,41,0	1/1:4,18:22:63.21:885,63,0	1/1:11,23:34:96.26:1227,96,0	1/1:0,6:6:18.06:242,18,0
chr10	5501052	.	C	CT	300.60	PASS	AC=20;AF=0.833;AN=24;BaseQRankSum=3.435;DP=69;FS=14.762;HRun=2;HaplotypeScore=29.3726;InbreedingCoeff=0.3461;MQ=222.57;MQ0=0;MQRankSum=-4.986;QD=25.05;ReadPosRankSum=-2.019;VQSLOD=1.4206;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:25,0:25:66.20:0,66,877	0/0:31,0:31:89.57:0,90,1064	1/1:0,1:1:3.01:46,3,0	1/1:2,0:2:3.01:45,3,0	1/1:1,0:1:2.99:23,3,0	1/1:2,0:2:3:27,3,0	1/1:1,0:1:3:26,3,0	./.	./.	./.	./.	1/1:0,1:1:3.01:47,3,0	1/1:0,1:1:3.01:47,3,0	1/1:0,1:1:3.01:47,3,0	./.	./.	1/1:0,1:1:3.01:47,3,0	./.	./.	./.	./.	./.	./.	1/1:0,1:1:3.01:46,3,0	./.	./.
chr10	5501108	.	GT	G	462.20	PASS	AC=20;AF=0.833;AN=24;BaseQRankSum=0.447;DP=78;FS=5.947;HRun=5;HaplotypeScore=22.2823;InbreedingCoeff=0.4758;MQ=188.07;MQ0=3;MQRankSum=-6.009;QD=22.01;ReadPosRankSum=-5.518;VQSLOD=0.6938;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:12,0:12:36.12:0,36,492	0/0:33,0:33:78.57:0,79,961	./.	./.	1/1:0,1:1:3.01:33,3,0	1/1:1,0:1:3:25,3,0	1/1:2,0:2:6:58,6,0	1/1:0,1:1:3.01:34,3,0	./.	./.	1/1:0,3:3:3.01:34,3,0	./.	1/1:4,0:4:12.01:123,12,0	1/1:1,0:1:3.01:34,3,0	./.	./.	1/1:0,3:3:9.02:101,9,0	1/1:1,1:1:2.99:24,3,0	./.	1/1:0,3:3:9.02:101,9,0	./.	./.	./.	./.	./.	./.
chr10	5501350	.	C	CTT	304.79	PASS	AC=16;AF=0.800;AN=20;BaseQRankSum=-0.387;DP=77;FS=16.241;HRun=0;HaplotypeScore=29.7106;InbreedingCoeff=0.4440;MQ=130.25;MQ0=14;MQRankSum=-1.894;QD=17.93;ReadPosRankSum=-2.109;VQSLOD=1.1334;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:21,0:14:18.64:0,19,307	0/0:21,0:17:26.53:0,27,330	1/1:2,0:2:5.99:73,6,0	./.	./.	./.	./.	./.	1/1:1,1:1:3.01:49,3,0	1/1:2,0:2:3.01:38,3,0	./.	./.	1/1:1,1:2:3.01:37,3,0	./.	./.	1/1:1,0:1:3.01:39,3,0	./.	./.	./.	./.	1/1:2,0:2:3.01:51,3,0	1/1:2,0:1:3.01:38,3,0	./.	./.	1/1:1,2:3:6.02:78,6,0	./.
chr10	5504392	.	TC	T	1540.20	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.393;DP=823;FS=4.868;HRun=1;HaplotypeScore=75.0274;InbreedingCoeff=0.9980;MQ=80.48;MQ0=0;MQRankSum=-4.150;QD=31.43;ReadPosRankSum=3.307;VQSLOD=3.3690;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,49:49:99:1635,117,0	0/0:8,0:8:24.07:0,24,353	0/0:27,0:27:81.19:0,81,1193	0/0:21,0:21:63.17:0,63,937	0/0:26,0:25:75.24:0,75,1144	0/0:22,0:22:66.20:0,66,988	0/0:25,0:25:74.99:0,75,1136	0/0:38,0:38:99:0,111,1659	0/0:23,0:23:69.22:0,69,1057	0/0:44,0:44:99:0,132,2027	0/0:28,0:28:81.21:0,81,1237	0/0:33,0:33:99:0,99,1502	0/0:29,0:29:87.28:0,87,1332	0/0:33,0:33:99:0,99,1522	0/0:26,0:26:75.23:0,75,1127	0/0:32,0:32:96.31:0,96,1475	0/0:24,0:24:72.17:0,72,1032	0/0:19,0:19:57.12:0,57,818	0/0:31,0:31:93.31:0,93,1435	0/0:30,0:30:90.29:0,90,1378	0/0:56,0:56:99:0,169,2579	0/0:33,0:33:99:0,99,1526	0/0:20,0:20:60.20:0,60,938	0/0:34,0:34:99:0,99,1522	0/0:27,0:27:78.21:0,78,1148	0/0:36,0:36:99:0,108,1671	0/0:31,0:31:93.30:0,93,1430	0/0:18,0:18:54.14:0,54,817
chr10	5506772	.	C	CACCACT	6849.28	PASS	AB=0.895;AC=11;AF=0.196;AN=56;BaseQRankSum=-8.320;DP=846;FS=10.609;HRun=0;HaplotypeScore=271.9597;InbreedingCoeff=0.6663;MQ=64.77;MQ0=0;MQRankSum=-4.457;QD=35.31;ReadPosRankSum=-8.336;VQSLOD=2.0513;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:50,12:63:99:2612,147,0	0/0:10,0:10:17.59:0,18,240	0/1:18,0:19:10.90:11,0,231	0/0:31,0:30:30.28:0,30,800	0/0:24,0:24:53.41:0,53,562	0/0:27,0:27:41.89:0,42,680	0/0:29,0:29:70.08:0,70,873	0/0:38,0:38:47.27:0,47,926	0/0:41,0:41:99:0,114,1437	0/0:30,0:30:20.05:0,20,745	0/1:18,0:18:7.11:7,0,409	0/0:28,0:28:75.54:0,76,883	0/0:36,0:36:72.97:0,73,1172	0/0:30,0:30:57.73:0,58,913	0/0:34,0:34:93.09:0,93,1120	0/1:19,15:30:84.10:1438,0,84	0/0:43,0:43:76.95:0,77,1259	0/0:29,0:29:78.09:0,78,912	1/1:17,4:21:60.12:1042,60,0	1/1:14,6:19:41.99:938,42,0	0/0:42,0:42:78.62:0,79,951	1/1:13,5:18:31.92:801,32,0	0/0:24,0:24:8.97:0,9,439	0/0:48,0:48:99:0,137,1647	0/0:26,0:26:50.32:0,50,685	0/0:35,0:35:72.49:0,72,1106	0/0:37,0:37:63.66:0,64,1106	0/0:10,0:10:14.60:0,15,197
chr10	5507091	.	C	CGTGTGTGT	286.10	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.351;DP=711;FS=1.841;HRun=0;HaplotypeScore=182.1141;InbreedingCoeff=0.9174;MQ=58.76;MQ0=9;MQRankSum=-3.726;QD=10.22;ReadPosRankSum=-0.764;VQSLOD=2.6529;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,114,2948	0/0:6,0:6:12.04:0,12,308	0/0:46,0:26:68.14:0,68,1128	0/0:27,0:17:41.74:0,42,990	0/0:13,0:13:39.09:0,39,1027	0/0:20,0:20:57.15:0,57,1546	0/0:31,0:31:87.10:0,87,1975	0/0:24,0:24:57.09:0,57,1236	0/0:33,0:33:93.26:0,93,2272	0/0:14,0:14:41.97:0,42,1028	0/0:9,0:9:23.97:0,24,508	0/0:35,0:35:99:0,100,2666	0/0:26,0:26:75.04:0,75,1693	0/0:25,0:25:75.20:0,75,1995	0/0:17,0:17:45.13:0,45,1146	0/0:27,0:27:75.04:0,75,1671	1/1:3,15:28:15.47:375,15,0	0/0:36,0:36:99:0,105,2684	0/0:24,0:23:65.97:0,66,1349	0/0:9,0:9:12.51:0,13,351	0/0:79,0:78:99:0,225,5627	0/0:15,0:15:21.07:0,21,569	0/0:6,0:6:18.06:0,18,482	0/0:49,0:49:99:0,144,3640	0/0:18,0:18:48.16:0,48,1374	0/0:28,0:28:78.17:0,78,1686	0/0:15,0:15:42.06:0,42,1008	0/0:11,0:10:30:0,30,631
chr10	5507490	.	CCCTGT	C	728.59	PASS	AB=1.000;AC=12;AF=0.222;AN=54;BaseQRankSum=1.837;DP=681;FS=9.868;HRun=0;HaplotypeScore=105.7383;InbreedingCoeff=0.3891;MQ=60.02;MQ0=79;MQRankSum=0.782;QD=6.39;ReadPosRankSum=-2.689;VQSLOD=0.1750;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:21,0:16:21.93:235,0,22	0/0:2,0:2:6.02:0,6,147	0/0:69,0:15:1.50:0,1,21	0/0:111,0:39:32.27:0,32,312	0/0:6,0:5:2:0,2,90	0/0:11,0:11:26.99:0,27,400	0/0:42,0:38:56.43:0,56,885	0/0:12,0:7:12.01:0,12,136	0/0:15,0:13:18.03:0,18,294	0/0:10,0:10:12.04:0,12,221	0/0:7,0:7:18.03:0,18,283	0/0:22,0:19:45.11:0,45,650	0/0:17,0:16:33.08:0,33,577	0/0:13,0:12:24.06:0,24,412	1/1:1,7:8:3.01:36,3,0	0/1:10,0:8:16.56:17,0,36	0/0:51,0:34:23.40:0,23,195	0/0:29,0:27:28.44:0,28,1177	0/0:14,0:8:0:0,0,0	0/1:16,0:13:13.63:58,0,14	0/0:56,0:45:93.21:0,93,1586	0/1:16,0:14:18.10:18,0,21	0/0:7,0:7:12:0,12,135	0/0:51,0:49:86.27:0,86,1775	./.	1/1:26,0:23:24.02:301,24,0	1/1:10,0:8:12.02:168,12,0	1/1:6,0:5:3.01:49,3,0
chr10	5509427	.	C	CA	167.48	PASS	AB=0.859;AC=6;AF=0.107;AN=56;BaseQRankSum=5.907;DP=365;FS=2.126;HRun=0;HaplotypeScore=176.7004;InbreedingCoeff=-0.1746;MQ=48.31;MQ0=1;MQRankSum=-5.085;QD=2.04;ReadPosRankSum=1.135;VQSLOD=2.9094;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:35.80:0,36,438	0/0:5,0:5:9.03:0,9,113	0/0:10,0:7:23.93:0,24,284	0/0:14,0:13:39.12:0,39,530	0/0:10,3:13:4.94:0,5,64	0/1:8,1:9:28.45:28,0,147	0/0:21,1:22:1.94:0,2,227	0/0:21,2:23:22.64:0,23,803	0/0:20,0:20:45.01:0,45,545	0/1:15,4:19:99:147,0,499	0/0:5,0:5:3:0,3,42	0/0:11,1:12:17.94:0,18,187	0/0:14,0:14:24.04:0,24,313	0/1:10,1:11:14.67:15,0,230	0/1:18,2:20:12.62:13,0,264	0/0:13,0:13:29.64:0,30,365	0/0:15,0:15:39.11:0,39,521	0/0:10,0:10:30.10:0,30,419	0/0:8,1:9:1.01:0,1,230	0/0:7,1:8:6.02:0,6,84	0/0:26,0:25:29.94:0,30,419	0/0:6,1:7:3.01:0,3,42	0/1:7,1:8:19.92:20,0,160	0/0:11,0:11:14.94:0,15,194	0/1:9,5:15:64.47:64,0,148	0/0:19,1:20:13.14:0,13,734	0/0:6,0:5:12:0,12,146	0/0:2,0:2:6.02:0,6,84
chr10	5509880	.	TAACA	T	2648.06	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=10.186;DP=705;FS=2.402;HRun=0;HaplotypeScore=113.9362;InbreedingCoeff=0.9976;MQ=68.42;MQ0=0;MQRankSum=-2.671;QD=32.69;ReadPosRankSum=0.890;VQSLOD=3.8894;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,123,3009	0/0:7,0:7:18.06:0,18,453	0/0:36,0:36:75.23:0,75,1583	0/0:28,0:28:66.62:0,67,1283	0/0:29,0:29:63.21:0,63,1466	0/0:24,0:24:60.20:0,60,1456	0/0:34,0:34:80.76:0,81,1854	0/0:30,0:30:60.19:0,60,1388	0/0:25,0:25:66.23:0,66,1515	0/0:28,0:28:63.20:0,63,1474	0/0:14,0:14:33.10:0,33,706	0/0:23,0:23:54.19:0,54,1308	0/0:21,0:21:57.19:0,57,1315	0/0:24,0:24:57.18:0,57,1370	0/0:30,0:30:81.26:0,81,1860	1/1:5,18:23:42.14:721,42,0	0/0:27,0:27:75.26:0,75,1836	0/0:22,0:22:48.16:0,48,1174	1/1:4,11:15:36.11:574,36,0	1/1:2,24:26:60.20:947,60,0	0/0:33,0:33:81.28:0,81,2015	1/1:5,12:17:33.11:566,33,0	0/0:19,0:19:54.19:0,54,1328	0/0:34,0:34:96.31:0,96,2328	0/0:21,0:21:60.20:0,60,1457	0/0:27,0:27:66.23:0,66,1661	0/0:29,0:29:78.26:0,78,1879	0/0:14,0:14:42.14:0,42,881
chr10	5511579	.	AG	A	4562.61	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=11.376;DP=787;FS=3.862;HRun=1;HaplotypeScore=88.4737;InbreedingCoeff=0.9950;MQ=87.97;MQ0=0;MQRankSum=-2.560;QD=39.67;ReadPosRankSum=2.387;VQSLOD=5.4921;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,132,2029	0/0:8,0:8:24.05:0,24,357	0/0:29,0:29:87.28:0,87,1366	0/0:28,0:28:69.27:0,69,1182	0/0:36,0:36:99:0,108,1682	0/0:23,0:23:69.24:0,69,1100	0/0:20,0:20:60.20:0,60,956	0/0:24,0:24:66.21:0,66,1015	0/0:32,0:32:96.31:0,96,1512	0/0:32,0:32:96.31:0,96,1495	0/0:15,0:15:45.15:0,45,719	0/0:35,0:35:99:0,105,1623	0/0:25,0:25:75.26:0,75,1191	0/0:34,0:34:99:0,102,1577	0/0:26,0:26:78.27:0,78,1244	1/1:0,37:37:99:1511,108,0	0/0:35,0:35:99:0,105,1650	0/0:31,0:31:90.31:0,90,1425	1/1:0,24:24:72.24:1005,72,0	1/1:0,27:27:75.25:1040,75,0	0/0:50,0:50:99:0,148,2348	1/1:1,26:27:72.24:1007,72,0	0/0:27,0:27:75.23:0,75,1171	0/0:35,0:35:99:0,105,1669	0/0:15,0:15:45.14:0,45,689	0/0:38,0:38:99:0,111,1730	0/0:25,0:24:75.21:0,75,1145	0/0:5,0:5:15.05:0,15,229
chr10	5513694	.	C	CCACGAGGAGG	3878.94	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-2.407;DP=706;FS=7.808;HRun=0;HaplotypeScore=209.4517;InbreedingCoeff=0.9755;MQ=78.45;MQ0=0;MQRankSum=-8.687;QD=107.75;ReadPosRankSum=-0.887;VQSLOD=2.8390;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:87.30:0,87,2500	0/0:4,0:4:12.03:0,12,281	0/0:17,0:18:45.86:0,46,1209	0/0:16,0:16:36.08:0,36,656	0/0:20,0:20:42.14:0,42,1312	0/0:25,0:25:69.23:0,69,2071	0/0:31,0:31:75.26:0,75,2294	0/0:20,0:20:36.11:0,36,1001	0/0:33,0:33:75.26:0,75,2242	0/0:39,0:39:99:0,99,3045	0/0:17,0:17:48.15:0,48,1292	0/0:33,0:33:81.28:0,81,2479	0/0:30,0:30:84.29:0,84,2476	0/0:33,0:33:81.28:0,81,2304	1/1:5,8:13:30.10:1398,30,0	0/0:23,0:23:63.21:0,63,1815	0/0:28,0:28:63.22:0,63,1955	0/0:22,0:22:63.22:0,63,1833	0/0:22,0:22:54.17:0,54,1521	0/0:10,0:10:27.09:0,27,851	0/0:83,0:83:99:0,214,6265	0/0:24,0:24:51.16:0,51,1504	0/0:24,0:24:60.18:0,60,1695	0/0:35,0:35:72.25:0,72,2185	1/1:6,16:23:51.13:2481,51,0	0/0:21,0:21:51.18:0,51,1571	0/0:22,0:22:63.20:0,63,1810	0/0:5,0:5:15.05:0,15,473
chr10	5514113	.	GAC	G	982.33	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.145;DP=491;FS=4.967;HRun=0;HaplotypeScore=58.0964;InbreedingCoeff=0.9928;MQ=93.16;MQ0=0;MQRankSum=-3.482;QD=32.74;ReadPosRankSum=1.024;VQSLOD=5.3478;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:90.31:0,90,1643	0/0:9,0:9:27.07:0,27,463	0/0:24,0:24:60.18:0,60,1035	0/0:18,0:18:51.13:0,51,837	0/0:19,0:19:51.17:0,51,928	0/0:19,0:19:45.14:0,45,794	0/0:20,0:20:60.21:0,60,1099	0/0:23,0:23:66.22:0,66,1183	0/0:14,0:14:42.14:0,42,762	0/0:19,0:19:57.17:0,57,985	0/0:9,0:9:24.08:0,24,439	0/0:19,0:19:57.20:0,57,1035	0/0:13,0:13:39.13:0,39,713	0/0:11,0:11:33.10:0,33,574	1/1:0,14:14:39.13:552,39,0	0/0:13,0:13:39.12:0,39,684	0/0:28,0:28:75.26:0,75,1374	0/0:43,0:43:99:0,126,2204	0/0:14,0:14:39.13:0,39,715	0/0:7,0:7:18.06:0,18,329	0/0:32,0:32:93.32:0,93,1673	0/0:11,0:11:33.11:0,33,605	0/0:9,0:9:27.09:0,27,474	0/0:17,0:17:51.15:0,51,903	1/1:1,15:16:39.13:552,39,0	0/0:15,0:15:42.14:0,42,770	0/0:16,0:16:45.15:0,45,823	0/0:9,0:9:27.09:0,27,494
chr10	5517436	.	G	GA	3769.29	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=4.089;DP=631;FS=0.000;HRun=8;HaplotypeScore=86.1154;InbreedingCoeff=0.9859;MQ=85.98;MQ0=0;MQRankSum=-2.016;QD=29.45;ReadPosRankSum=-2.653;VQSLOD=2.2894;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:92.98:0,93,842	0/0:10,0:10:27.01:0,27,247	0/0:26,0:27:55.46:0,55,450	0/0:15,0:15:19.38:0,19,204	0/0:20,0:21:59.05:0,59,522	0/0:25,0:25:60.01:0,60,544	0/0:29,0:29:80.97:0,81,721	0/0:23,0:23:48.01:0,48,439	0/0:17,0:17:42.02:0,42,384	0/0:33,0:33:81.02:0,81,734	0/0:9,0:9:21.01:0,21,192	0/0:18,0:18:48.02:0,48,439	0/0:24,0:24:48.52:0,49,588	0/0:20,0:20:45:0,45,407	1/1:2,24:26:69.20:795,69,0	1/1:2,12:14:33.10:381,33,0	0/0:47,1:48:97.43:0,97,1141	0/0:21,0:21:60.03:0,60,549	1/1:5,22:27:66.20:761,66,0	1/1:1,18:20:54.15:616,54,0	0/0:33,0:33:93.02:0,93,846	1/1:1,18:19:48.10:539,48,0	0/0:24,0:24:66.03:0,66,603	0/0:20,0:20:51.02:0,51,466	1/1:1,21:22:60.14:678,60,0	0/0:24,0:24:53.98:0,54,484	0/0:22,0:22:53.99:0,54,484	0/0:3,0:3:9:0,9,82
chr10	5517696	.	T	TA	1271.49	PASS	AB=0.548;AC=5;AF=0.089;AN=56;BaseQRankSum=-5.837;DP=652;FS=0.580;HRun=8;HaplotypeScore=66.3161;InbreedingCoeff=0.7705;MQ=84.74;MQ0=0;MQRankSum=-1.258;QD=21.92;ReadPosRankSum=-0.149;VQSLOD=3.8116;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,150,1367	0/0:5,0:5:12.01:0,12,110	0/0:22,0:21:44.14:0,44,430	0/0:19,0:19:32.98:0,33,301	0/0:26,0:26:69.03:0,69,631	0/0:15,0:15:45.02:0,45,412	0/0:42,0:42:99:0,108,977	0/0:27,0:27:65.99:0,66,601	0/0:25,0:25:72.03:0,72,659	0/0:28,0:28:72.02:0,72,655	0/0:18,0:18:48.02:0,48,439	0/0:30,0:30:75.01:0,75,681	0/0:24,0:24:60.03:0,60,549	0/0:29,0:29:74.99:0,75,678	0/0:18,0:18:51.02:0,51,467	0/0:18,0:17:45.01:0,45,407	0/0:21,0:21:60:0,60,543	0/0:24,0:24:60.03:0,60,549	0/0:12,0:12:30.01:0,30,275	0/0:19,0:19:54.03:0,54,494	0/0:34,0:34:84.02:0,84,768	0/0:19,0:19:41.98:0,42,373	0/0:13,0:13:39.02:0,39,357	0/0:32,0:32:90:0,90,816	0/0:22,0:22:47.99:0,48,434	0/1:4,19:23:19.24:549,0,19	1/1:6,22:28:54.16:622,54,0	1/1:1,6:7:21.04:229,21,0
chr10	5517952	.	CCTCT	C	5171.53	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=12.342;DP=676;FS=1.831;HRun=0;HaplotypeScore=112.3212;InbreedingCoeff=0.9988;MQ=92.38;MQ0=1;MQRankSum=-4.945;QD=44.97;ReadPosRankSum=2.098;VQSLOD=5.3205;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,35:40:99:1842,99,0	0/0:12,0:12:33.11:0,33,880	0/0:32,0:32:90.31:0,90,2267	0/0:33,0:33:75.21:0,75,1732	0/0:20,0:20:51.18:0,51,1307	0/0:21,0:21:42.03:0,42,1398	0/0:30,0:30:90.31:0,90,2369	0/0:21,0:21:60.21:0,60,1507	0/0:36,0:36:99:0,102,2615	0/0:23,0:23:69.24:0,69,1809	0/0:22,0:22:63.22:0,63,1665	0/0:25,0:25:75.24:0,75,1852	0/0:24,0:24:69.22:0,69,1760	0/0:29,0:29:87.30:0,87,2248	0/0:33,0:33:93.31:0,93,2425	1/1:1,18:19:45.15:839,45,0	0/0:20,0:20:54.17:0,54,1341	0/0:24,0:24:72.25:0,72,1845	1/1:5,25:27:72.23:1260,72,0	1/1:0,12:12:33.11:615,33,0	0/0:36,0:36:99:0,105,2723	1/1:2,12:14:33.11:616,33,0	0/0:18,0:18:45.13:0,45,1141	0/0:40,0:40:99:0,117,3056	0/0:18,0:18:51.15:0,51,1240	0/0:14,0:14:39.13:0,39,1034	0/0:22,0:22:60.21:0,60,1525	0/0:8,0:8:21.07:0,21,559
chr10	5518291	.	T	TCTCCCC	5350.97	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=1.441;DP=386;FS=9.943;HRun=0;HaplotypeScore=100.9442;InbreedingCoeff=0.8872;MQ=65.07;MQ0=5;MQRankSum=-10.038;QD=43.15;ReadPosRankSum=1.526;VQSLOD=4.0213;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,5:10:18.02:529,18,0	0/0:4,0:4:6.02:0,6,131	0/0:43,0:16:29.96:0,30,533	0/0:51,0:22:34.02:0,34,440	0/0:10,0:10:21.06:0,21,411	0/0:12,0:12:24.02:0,24,526	0/0:17,0:17:37.88:0,38,738	0/0:18,0:18:37.01:0,37,778	0/0:8,0:8:18.06:0,18,393	0/0:11,0:11:24.08:0,24,509	0/0:7,0:7:15.03:0,15,264	0/0:16,0:16:39.11:0,39,746	0/0:3,0:3:6.02:0,6,112	0/0:13,0:13:33.10:0,33,646	1/1:11,1:13:18.06:527,18,0	1/1:5,2:7:15.05:352,15,0	1/1:29,1:30:57.15:1276,57,0	0/0:12,0:11:29.03:0,29,614	1/1:4,2:6:12.04:321,12,0	1/1:8,1:9:8.96:222,9,0	0/0:15,0:15:24.08:0,24,495	1/1:7,1:8:8.95:210,9,0	0/0:6,0:6:12.04:0,12,243	0/0:15,0:15:32.93:0,33,680	1/1:4,6:10:21.07:642,21,0	1/1:10,4:14:0.06:602,0,0	1/1:5,4:9:12.04:395,12,0	1/1:8,0:8:12.04:278,12,0
chr10	5518299	.	T	TCCC	3075.41	PASS	AB=0.967;AC=18;AF=0.321;AN=56;BaseQRankSum=7.007;DP=404;FS=2.372;HRun=5;HaplotypeScore=97.1583;InbreedingCoeff=0.6787;MQ=56.70;MQ0=8;MQRankSum=-9.824;QD=22.29;ReadPosRankSum=3.209;VQSLOD=0.0290;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:11,0:11:30.52:168,0,31	0/0:5,0:5:12.02:0,12,168	0/0:44,0:14:33.11:0,33,518	0/0:47,0:18:33.26:0,33,416	0/0:14,0:14:24.05:0,24,328	0/0:10,0:10:24.08:0,24,398	0/0:17,0:17:28.70:0,29,580	0/0:22,0:20:41.87:0,42,629	0/0:7,0:7:21.07:0,21,339	0/0:11,0:11:27.09:0,27,436	0/0:6,0:6:15.03:0,15,223	0/0:16,0:16:42.14:0,42,694	0/0:3,0:3:9.03:0,9,118	0/0:13,0:13:39.11:0,39,584	1/1:8,2:11:2.92:425,3,0	0/1:7,0:7:0.89:123,0,1	1/1:12,6:30:23.62:798,24,0	0/0:15,0:12:33.11:0,33,541	1/1:11,0:12:7.73:104,8,0	1/1:8,1:9:15.03:211,15,0	0/0:13,0:13:24.08:0,24,392	0/1:11,1:12:1.65:96,0,2	0/0:8,0:8:18.06:0,18,285	0/0:15,0:14:35.65:0,36,565	1/1:9,1:10:27.09:514,27,0	0/1:15,1:16:51.11:311,0,51	1/1:12,0:11:21.07:299,21,0	1/1:4,1:6:11.31:217,11,0
chr10	5518306	.	C	CT	572.20	PASS	AB=0.915;AC=29;AF=0.518;AN=56;BaseQRankSum=3.421;DP=432;FS=1.447;HRun=16;HaplotypeScore=103.0611;InbreedingCoeff=0.2262;MQ=53.15;MQ0=13;MQRankSum=-6.024;QD=2.15;ReadPosRankSum=-1.522;VQSLOD=-0.1983;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:10,5:16:8.22:85,0,8	0/1:5,1:6:15.24:15,0,25	1/1:40,0:10:6.27:21,6,0	0/0:46,1:17:1.08:0,1,32	0/1:16,1:17:10.25:10,0,48	0/1:13,1:14:15.57:16,0,25	0/0:13,0:17:20.17:0,20,136	0/0:24,0:22:17.77:0,18,94	0/1:9,0:11:8.13:8,0,19	0/0:10,1:12:3.38:0,3,68	0/0:7,0:6:6.51:0,7,26	0/0:22,0:21:6.63:0,7,74	0/1:2,0:2:0:0,0,0	0/1:16,0:16:6.42:6,0,64	1/1:6,0:7:2.28:38,2,0	0/1:11,1:13:2.17:55,0,2	1/1:22,0:26:3.66:95,4,0	0/1:16,2:15:26.12:26,0,52	1/1:10,1:12:21.46:102,21,0	1/1:9,2:11:11.99:66,12,0	0/0:9,0:9:4.42:0,4,21	1/1:11,0:14:7.14:35,7,0	0/0:8,1:10:13.38:0,13,72	0/0:16,0:16:13.77:0,14,64	1/1:6,0:7:5.44:39,5,0	1/1:15,1:17:12:88,12,0	1/1:11,0:10:3.93:22,4,0	1/1:4,0:4:2.61:11,3,0
chr10	5518335	.	TC	T	2637.07	PASS	AB=0.877;AC=19;AF=0.365;AN=52;BaseQRankSum=4.355;DP=346;FS=3.138;HRun=2;HaplotypeScore=48.1071;InbreedingCoeff=0.7193;MQ=41.67;MQ0=31;MQRankSum=-2.883;QD=18.31;ReadPosRankSum=1.139;VQSLOD=3.7840;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,17:19:36.07:443,36,0	0/0:7,0:6:18.06:0,18,253	./.	./.	0/0:15,0:14:21.07:0,21,296	0/0:9,0:9:15.05:0,15,209	0/0:19,0:18:32.89:0,33,371	0/0:16,0:15:35.79:0,36,410	0/0:10,0:10:21.07:0,21,293	0/0:12,0:10:20.54:0,21,230	0/0:8,0:6:13.93:0,14,170	0/0:24,0:21:17.24:0,17,467	0/0:5,0:5:15.02:0,15,174	0/0:12,0:12:32.87:0,33,384	0/1:14,0:10:22.97:98,0,23	1/1:2,14:16:27.08:336,27,0	1/1:9,18:21:45.14:570,45,0	0/0:17,0:16:35.97:0,36,421	1/1:1,9:7:15.05:189,15,0	1/1:2,8:9:24.01:273,24,0	0/0:6,0:6:17.99:0,18,196	1/1:4,8:12:21.07:267,21,0	0/0:12,0:12:24.07:0,24,313	0/0:24,0:17:36.01:0,36,430	0/1:9,0:9:9.81:82,0,10	0/1:7,10:16:55.65:351,0,56	1/1:0,6:6:12.04:147,12,0	1/1:1,2:2:6.02:77,6,0
chr10	5518908	.	A	AGT	1407.80	PASS	AB=0.911;AC=31;AF=0.646;AN=48;BaseQRankSum=-3.571;DP=612;FS=3.289;HRun=0;HaplotypeScore=115.5067;InbreedingCoeff=0.1249;MQ=66.98;MQ0=13;MQRankSum=2.044;QD=3.27;ReadPosRankSum=-0.775;VQSLOD=2.2241;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:33:12.89:14,0,13	1/1:13,0:13:9:83,9,0	./.	./.	0/1:25,0:25:17.96:18,0,18	0/1:23,0:23:37.34:99,0,37	1/1:27,0:33:3:26,3,0	./.	1/1:18,2:20:12.51:160,13,0	1/1:14,1:18:4.78:109,5,0	1/1:9,4:12:6.02:69,6,0	0/1:18,4:22:25.78:38,0,26	0/1:18,3:21:22.28:78,0,22	0/1:12,6:19:25.77:38,0,26	1/1:29,0:29:6.01:64,6,0	0/0:11,0:15:11.36:0,11,56	1/1:34,1:36:15.87:197,16,0	1/1:14,3:16:12.31:162,12,0	./.	0/0:11,0:15:8.52:0,9,42	1/1:24,0:25:5.95:84,6,0	0/0:13,0:14:8.52:0,9,42	1/1:11,2:13:3.01:44,3,0	1/1:20,5:25:15.05:219,15,0	1/1:26,0:26:3.01:30,3,0	0/0:31,0:31:5.84:0,6,63	0/1:12,1:13:31.66:32,0,82	0/0:5,0:4:2.29:0,2,31
chr10	5519301	.	CT	C	895.35	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=8.286;DP=708;FS=0.713;HRun=1;HaplotypeScore=68.6440;InbreedingCoeff=0.9841;MQ=86.44;MQ0=0;MQRankSum=0.027;QD=26.33;ReadPosRankSum=2.878;VQSLOD=3.6133;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,135,2003	0/0:6,0:6:18.06:0,18,287	0/0:16,0:16:48.15:0,48,715	0/0:31,0:31:87.26:0,87,1347	0/0:24,0:24:72.22:0,72,1123	0/0:18,0:18:54.16:0,54,838	0/0:28,0:28:84.27:0,84,1317	0/0:23,0:23:69.22:0,69,1061	0/0:29,0:29:84.26:0,84,1292	0/0:31,0:31:93.31:0,93,1463	0/0:6,0:6:18.06:0,18,285	0/0:26,0:26:78.25:0,78,1219	0/0:32,0:32:96.33:0,96,1528	0/0:19,0:19:57.19:0,57,908	0/0:35,0:35:99:0,105,1646	0/0:19,0:19:57.19:0,57,911	1/1:1,33:34:83.16:990,83,0	0/0:25,0:25:75.26:0,75,1182	0/0:31,0:31:93.28:0,93,1415	0/0:18,0:18:51.07:0,51,781	0/0:64,0:64:99:0,193,2966	0/0:18,0:18:54.14:0,54,835	0/0:18,0:18:51.16:0,51,788	0/0:31,0:31:93.30:0,93,1459	0/0:15,0:15:39.13:0,39,622	0/0:28,0:28:81.27:0,81,1273	0/0:26,0:26:78.27:0,78,1245	0/0:12,0:12:36.12:0,36,570
chr10	5519837	.	C	CTT	4251.12	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=2.184;DP=480;FS=2.468;HRun=11;HaplotypeScore=71.7969;InbreedingCoeff=0.9171;MQ=72.93;MQ0=2;MQRankSum=-1.776;QD=20.34;ReadPosRankSum=0.998;VQSLOD=4.2568;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,22:26:60.18:849,60,0	0/0:12,0:12:20.98:0,21,198	0/0:15,0:14:5.80:0,6,58	0/0:9,0:7:5.90:0,6,55	0/0:28,0:29:43.95:0,44,463	0/0:20,0:21:50.80:0,51,477	0/0:9,0:9:21.02:0,21,204	0/0:29,0:30:71.62:0,72,666	0/0:14,0:14:26.96:0,27,262	0/0:28,0:28:60.02:0,60,582	0/0:14,0:15:35.68:0,36,332	0/0:13,0:13:24:0,24,232	0/0:16,0:17:47.81:0,48,447	0/0:9,0:9:11.94:0,12,111	1/1:5,1:14:32.94:296,33,0	1/1:4,0:18:2.43:68,2,0	1/1:5,0:19:22.08:245,22,0	0/0:20,0:21:43.33:0,43,394	1/1:5,1:12:10.50:69,10,0	1/1:9,2:18:26.85:196,27,0	0/0:12,0:12:30.03:0,30,291	1/1:1,0:8:14.97:51,15,0	0/0:10,0:10:17.99:0,18,175	0/0:6,0:6:8.96:0,9,87	1/1:4,2:17:33.95:347,34,0	1/1:13,18:33:68.14:860,68,0	1/1:3,17:25:61.11:740,61,0	1/1:2,12:15:38.62:530,39,0
chr10	5520192	.	G	GAGAC	12316.21	PASS	AB=0.730;AC=28;AF=0.519;AN=54;BaseQRankSum=-14.744;DP=758;FS=4.413;HRun=0;HaplotypeScore=152.9391;InbreedingCoeff=0.6823;MQ=68.26;MQ0=5;MQRankSum=7.677;QD=28.38;ReadPosRankSum=1.327;VQSLOD=4.8624;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:72:99:0,114,1036	0/1:6,8:14:26.29:407,0,26	0/0:31,0:21:12.04:0,12,184	0/0:32,0:29:15.05:0,15,235	1/1:11,13:24:39.13:920,39,0	1/1:10,13:22:8.17:689,8,0	1/1:15,20:36:46.79:1179,47,0	1/1:32,0:30:17.95:252,18,0	1/1:16,13:29:33.11:779,33,0	1/1:16,14:31:45.10:953,45,0	1/1:12,9:21:18.06:428,18,0	1/1:12,13:28:33.11:785,33,0	1/1:6,11:17:30.10:714,30,0	0/1:11,9:21:32.30:271,0,32	0/0:7,0:24:41.92:0,42,378	0/1:7,0:21:16.42:16,0,241	0/0:12,0:27:18.91:0,19,170	1/1:14,19:35:54.18:1282,54,0	0/0:7,0:19:32.70:0,33,286	0/0:11,0:23:23.97:0,24,205	1/1:10,25:35:69.24:1641,69,0	0/0:3,0:10:14.96:0,15,127	1/1:12,12:24:24.08:571,24,0	0/1:15,27:43:25.49:1429,0,25	0/0:14,0:26:26.82:0,27,224	0/0:8,0:20:30.03:0,30,278	0/0:9,0:25:27.50:0,28,252	./.
chr10	5520575	.	ACACG	A	11984.72	PASS	AB=0.568;AC=21;AF=0.375;AN=56;BaseQRankSum=16.858;DP=707;FS=8.367;HRun=0;HaplotypeScore=135.3622;InbreedingCoeff=0.9220;MQ=88.12;MQ0=2;MQRankSum=-8.163;QD=43.27;ReadPosRankSum=5.432;VQSLOD=4.8638;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,37:42:96.29:1754,96,0	0/0:8,0:8:21.07:0,21,559	0/0:31,0:30:87.27:0,87,2174	0/0:29,0:29:75.23:0,75,1835	0/0:20,0:20:51.18:0,51,1341	0/0:24,0:24:66.23:0,66,1743	0/0:37,0:37:99:0,105,2749	0/0:21,0:21:60.20:0,60,1513	0/0:24,0:24:66.23:0,66,1759	0/0:33,0:33:90.30:0,90,2237	0/0:15,0:15:42.14:0,42,1048	0/0:24,0:24:72.21:0,72,1807	0/0:26,0:26:72.23:0,72,1860	0/0:26,0:26:63.20:0,63,1554	1/1:2,32:33:75.26:1399,75,0	1/1:2,20:22:51.17:952,51,0	1/1:3,30:33:84.29:1568,84,0	0/0:20,0:20:57.20:0,57,1463	1/1:3,15:18:45.13:806,45,0	1/1:1,24:25:69.23:1235,69,0	0/0:38,0:38:99:0,111,2911	1/1:0,23:23:48.16:879,48,0	0/0:23,0:23:51.16:0,51,1266	0/0:31,0:30:87.30:0,87,2183	1/1:1,25:24:54.18:991,54,0	0/1:6,19:25:98.58:947,0,99	1/1:4,18:22:60.21:1118,60,0	1/1:0,7:7:18.06:336,18,0
chr10	5520589	.	G	GGT	2427.84	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=6.741;DP=673;FS=2.600;HRun=0;HaplotypeScore=141.0504;InbreedingCoeff=0.9929;MQ=85.62;MQ0=2;MQRankSum=-9.435;QD=46.69;ReadPosRankSum=1.068;VQSLOD=3.9952;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,114,1601	0/0:11,0:11:30.10:0,30,442	0/0:26,0:26:78.24:0,78,1113	0/0:23,0:23:59.36:0,59,897	0/0:17,0:17:51.16:0,51,732	0/0:24,0:24:72.20:0,72,1029	0/0:33,0:33:96.32:0,96,1414	0/0:25,0:25:69.23:0,69,1011	0/0:17,0:17:51.15:0,51,730	0/0:29,0:29:87.29:0,87,1261	0/0:14,0:14:42.13:0,42,599	0/0:22,0:22:63.21:0,63,928	0/0:24,0:24:72.24:0,72,1060	0/0:21,0:21:60.19:0,60,864	0/0:31,0:30:75.25:0,75,1104	0/0:20,0:20:51.16:0,51,751	0/0:34,0:34:96.32:0,96,1401	0/0:16,0:16:45.11:0,45,638	0/0:18,0:18:54.18:0,54,795	0/0:31,0:31:78.24:0,78,1128	0/0:40,0:40:99:0,114,1673	0/0:24,0:24:57.18:0,57,819	0/0:21,0:21:51.17:0,51,744	0/0:28,0:27:81.27:0,81,1193	0/0:27,0:25:57.19:0,57,836	1/1:3,20:23:22.03:1130,22,0	1/1:5,17:22:63.22:1158,63,0	1/1:2,5:7:15.05:280,15,0
chr10	5521595	.	T	TG	621.58	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-6.726;DP=693;FS=0.882;HRun=6;HaplotypeScore=68.2810;InbreedingCoeff=0.9687;MQ=79.35;MQ0=0;MQRankSum=-1.226;QD=27.03;ReadPosRankSum=0.899;VQSLOD=4.0735;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,141,1416	0/0:18,0:18:51.10:0,51,513	0/0:29,0:29:70.22:0,70,642	0/0:21,0:21:26.04:0,26,239	0/0:30,0:30:87.19:0,87,887	0/0:24,0:24:66.13:0,66,667	0/0:18,0:18:48.09:0,48,482	0/0:25,0:25:66.14:0,66,668	0/0:23,0:23:54.10:0,54,544	0/0:32,0:32:84.18:0,84,852	0/0:16,0:16:45.10:0,45,459	0/0:27,0:27:72.16:0,72,734	0/0:26,0:26:75.17:0,75,765	0/0:21,0:21:57.13:0,57,582	0/0:32,0:32:93.18:0,93,939	0/0:17,0:17:39.08:0,39,398	1/1:2,21:23:57.18:716,57,0	0/0:23,0:23:66.15:0,66,673	0/0:26,0:26:57.10:0,57,573	0/0:22,0:22:63.14:0,63,643	0/0:35,0:35:99:0,99,1003	0/0:18,0:18:51.12:0,51,520	0/0:26,0:26:66.13:0,66,666	0/0:23,0:22:57.08:0,57,570	0/0:21,0:21:63.14:0,63,643	0/0:35,0:35:96.20:0,96,973	0/0:27,0:26:75.17:0,75,765	0/0:4,0:4:12:0,12,113
chr10	5524353	.	TGCA	T	952.83	PASS	AC=8;AF=0.364;AN=22;BaseQRankSum=5.077;DP=588;FS=12.869;HRun=0;HaplotypeScore=85.1221;InbreedingCoeff=0.9003;MQ=67.50;MQ0=9;MQRankSum=0.168;QD=6.95;ReadPosRankSum=0.636;VQSLOD=1.7377;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	./.	./.	1/1:38,11:49:5.71:75,6,0	./.	0/0:24,0:29:18.03:0,18,216	./.	./.	0/0:31,0:33:27.09:0,27,487	0/0:32,0:32:36.12:0,36,673	0/0:37,0:36:18.06:0,18,322	1/1:14,13:27:33.11:419,33,0	0/0:31,0:31:27.09:0,27,505	1/1:29,17:46:42.13:534,42,0	0/0:23,0:23:13.29:0,13,206	./.	./.	./.	./.	./.	0/0:51,3:54:25.08:0,25,1042	./.	./.	1/1:12,0:15:5.95:42,6,0	./.
chr10	5524718	.	GCA	G	2748.37	PASS	AB=0.805;AC=39;AF=0.750;AN=52;BaseQRankSum=0.874;DP=684;FS=6.810;HRun=0;HaplotypeScore=92.8727;InbreedingCoeff=0.3571;MQ=62.26;MQ0=19;MQRankSum=1.371;QD=5.34;ReadPosRankSum=0.894;VQSLOD=2.3715;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:43:23.98:0,24,205	1/1:7,5:12:3.48:33,3,0	./.	./.	1/1:9,0:9:3.48:34,3,0	0/1:15,5:21:29.46:96,0,29	0/1:21,6:28:2.57:155,0,3	0/0:17,0:17:8.86:0,9,57	1/1:18,11:31:6.97:220,7,0	1/1:22,0:22:2.84:14,3,0	1/1:6,1:12:17.38:120,17,0	0/1:22,0:25:32.46:49,0,32	1/1:14,10:24:17.88:176,18,0	1/1:24,4:28:11.86:111,12,0	0/0:15,0:21:18.03:0,18,210	1/1:14,4:20:11.66:92,12,0	1/1:22,0:32:22.26:106,22,0	1/1:20,6:25:19.56:205,20,0	1/1:12,2:14:6.02:65,6,0	1/1:11,5:14:12.02:129,12,0	1/1:42,16:59:29.39:281,29,0	0/1:14,5:20:35.52:37,0,36	0/1:16,6:20:35.33:56,0,35	1/1:15,14:28:36.09:388,36,0	0/0:14,0:18:18.02:0,18,208	1/1:18,5:23:15:148,15,0	1/1:20,11:32:35.10:369,35,0	1/1:6,1:7:3.01:32,3,0
chr10	5526424	.	A	AGT	1209.20	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=2.688;DP=752;FS=8.718;HRun=0;HaplotypeScore=106.5415;InbreedingCoeff=0.9941;MQ=71.98;MQ0=3;MQRankSum=-2.942;QD=25.73;ReadPosRankSum=-3.963;VQSLOD=3.3598;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:65,0:65:99:0,156,1864	0/0:14,0:14:30.09:0,30,369	0/0:30,0:22:21.06:0,21,259	0/0:34,0:33:37.37:0,37,607	0/0:19,0:20:47.98:0,48,568	0/0:29,0:30:75.05:0,75,885	0/0:19,0:19:45.05:0,45,509	0/0:29,0:30:63.01:0,63,731	0/0:21,0:22:56.96:0,57,661	0/0:20,0:20:54.16:0,54,652	0/0:10,0:10:21.02:0,21,221	0/0:26,0:26:36.19:0,36,623	0/0:24,0:25:63.02:0,63,740	0/0:25,0:25:60.19:0,60,738	1/1:8,19:27:51.17:823,51,0	0/0:30,0:30:75.18:0,75,894	0/0:35,0:34:84.24:0,84,1018	0/0:42,0:40:88.67:0,89,1092	0/0:19,0:19:51.16:0,51,627	0/0:15,0:15:36.10:0,36,431	0/0:72,0:72:99:0,162,1948	0/0:17,0:17:39.11:0,39,468	0/0:10,0:10:24.08:0,24,295	0/0:34,0:34:78.24:0,78,958	1/1:8,12:20:36.05:508,36,0	0/0:24,0:24:51.14:0,51,614	0/0:23,0:23:60.13:0,60,708	0/0:13,0:13:36.11:0,36,443
chr10	5526449	.	A	ATG	1067.79	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.146;DP=712;FS=0.000;HRun=0;HaplotypeScore=106.2621;InbreedingCoeff=0.9852;MQ=61.44;MQ0=3;MQRankSum=-2.016;QD=26.69;ReadPosRankSum=0.100;VQSLOD=4.6187;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,129,1566	0/0:11,0:11:27.07:0,27,330	0/0:31,0:22:54.09:0,54,642	0/0:35,0:27:53.03:0,53,593	0/0:18,0:18:48.15:0,48,610	0/0:31,0:31:78.18:0,78,947	0/0:19,0:19:54.16:0,54,672	0/0:38,0:37:72.19:0,72,868	0/0:20,0:20:48.15:0,48,611	0/0:32,0:32:81.22:0,81,997	0/0:10,0:10:24.08:0,24,306	0/0:19,0:19:42.12:0,42,520	0/0:27,0:27:66.21:0,66,839	0/0:26,0:26:63.20:0,63,801	1/1:5,14:19:39.13:638,39,0	0/0:23,1:24:12.99:0,13,713	0/0:28,0:28:60.18:0,60,749	0/0:38,0:37:85.21:0,85,1068	0/0:21,0:21:57.14:0,57,685	0/0:16,0:16:42.13:0,42,534	0/0:53,0:53:99:0,126,1574	0/0:16,0:16:39.12:0,39,496	0/0:11,0:11:30.06:0,30,365	0/0:29,0:29:72.17:0,72,882	1/1:0,21:21:33.11:551,33,0	0/0:20,0:20:57.17:0,57,713	0/0:27,0:27:72.18:0,72,873	0/0:17,0:17:42:0,42,454
chr10	5526541	.	AT	A	935.92	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.786;DP=476;FS=3.985;HRun=10;HaplotypeScore=90.2245;InbreedingCoeff=0.8439;MQ=71.35;MQ0=0;MQRankSum=-3.207;QD=19.50;ReadPosRankSum=-0.895;VQSLOD=3.8676;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:31:81.16:0,81,866	0/0:15,0:15:45.12:0,45,498	0/0:10,0:9:8.52:0,9,51	0/0:11,0:7:0:0,0,0	0/0:29,0:29:84.20:0,84,911	0/0:16,1:17:19.03:0,19,420	0/0:7,0:7:18.03:0,18,189	0/0:33,0:33:78.14:0,78,820	0/0:11,0:12:32.84:0,33,321	0/0:21,0:21:51.13:0,51,555	0/0:15,1:16:22.07:0,22,472	0/0:13,0:13:33.09:0,33,365	0/0:10,0:10:18.05:0,18,198	0/0:16,0:16:33.06:0,33,343	1/1:2,12:14:38.98:332,39,0	0/0:10,0:10:27.07:0,27,299	0/0:32,0:32:84.20:0,84,911	0/0:17,0:17:42.09:0,42,455	0/0:24,0:24:45.10:0,45,483	0/0:14,0:14:42.11:0,42,464	0/0:3,0:3:6.02:0,6,66	0/0:11,0:11:24.05:0,24,257	0/0:16,0:16:42.11:0,42,465	0/0:5,0:5:15.01:0,15,154	1/1:9,25:34:83.96:724,84,0	0/0:21,0:21:57.15:0,57,630	0/0:18,2:20:19.06:0,19,431	0/0:14,0:14:42.11:0,42,464
chr10	5526566	.	GT	G	1338.24	PASS	AB=0.909;AC=9;AF=0.161;AN=56;BaseQRankSum=2.481;DP=449;FS=1.747;HRun=9;HaplotypeScore=76.1694;InbreedingCoeff=0.7765;MQ=69.75;MQ0=0;MQRankSum=1.651;QD=19.12;ReadPosRankSum=-2.050;VQSLOD=3.3099;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:60.17:0,60,682	0/0:17,0:17:39.12:0,39,450	0/1:9,1:9:28.64:29,0,73	0/0:11,0:7:4.95:0,5,61	0/0:31,1:32:62.79:0,63,960	0/0:19,0:19:57.17:0,57,656	0/0:4,0:4:12.04:0,12,138	0/0:26,0:26:72.21:0,72,831	0/0:12,0:12:32.82:0,33,348	0/0:15,0:15:36.11:0,36,416	0/0:13,0:13:33.10:0,33,381	0/0:11,0:11:27.07:0,27,302	0/0:10,0:10:27.08:0,27,312	0/0:11,0:11:27.07:0,27,302	0/0:3,0:16:39.97:0,40,215	1/1:1,12:13:33.02:302,33,0	0/0:32,0:32:84.19:0,84,930	0/0:13,0:13:39.02:0,39,420	1/1:2,20:22:60.01:543,60,0	1/1:0,22:22:62.99:568,63,0	0/0:2,0:2:6.02:0,6,69	1/1:1,2:3:6:55,6,0	0/0:17,0:17:45.11:0,45,499	0/0:6,0:6:15.04:0,15,173	0/0:6,0:28:68.63:0,69,378	0/0:19,0:19:42.12:0,42,485	0/0:22,0:22:60.15:0,60,670	0/0:20,0:20:57.17:0,57,658
chr10	5526942	.	GC	G	2914.41	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=9.473;DP=618;FS=7.345;HRun=2;HaplotypeScore=63.0427;InbreedingCoeff=0.9994;MQ=79.58;MQ0=0;MQRankSum=-1.869;QD=35.98;ReadPosRankSum=1.722;VQSLOD=4.2060;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,117,1750	0/0:11,0:11:33.11:0,33,493	0/0:13,0:13:39.04:0,39,540	0/0:18,0:18:39.09:0,39,675	0/0:19,0:19:57.19:0,57,854	0/0:28,0:28:84.28:0,84,1259	0/0:25,0:25:75.25:0,75,1122	0/0:17,0:17:51.17:0,51,741	0/0:18,0:18:54.18:0,54,794	0/0:29,0:29:87.29:0,87,1291	0/0:23,0:23:66.22:0,66,985	0/0:23,0:23:69.21:0,69,987	0/0:17,0:17:48:0,48,717	0/0:16,0:16:48.15:0,48,700	0/0:25,0:25:72.24:0,72,1076	1/1:0,15:15:45.15:584,45,0	0/0:28,0:28:81.25:0,81,1165	0/0:17,0:17:51.15:0,51,742	1/1:0,9:9:27.09:351,27,0	1/1:0,29:29:87.28:1128,87,0	0/0:31,0:31:90.30:0,90,1349	1/1:0,28:28:78.25:1012,78,0	0/0:37,0:37:99:0,108,1585	0/0:27,0:27:81.26:0,81,1193	0/0:15,0:15:45.15:0,45,674	0/0:24,0:24:72.24:0,72,1067	0/0:23,0:23:69.23:0,69,1032	0/0:12,0:12:30.10:0,30,450
chr10	5527028	.	T	TA	1348.58	PASS	AB=0.976;AC=6;AF=0.107;AN=56;BaseQRankSum=-7.414;DP=500;FS=1.133;HRun=10;HaplotypeScore=56.5264;InbreedingCoeff=0.6314;MQ=72.91;MQ0=0;MQRankSum=0.235;QD=15.32;ReadPosRankSum=-0.855;VQSLOD=3.6233;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,29:34:75.18:794,75,0	0/0:6,0:6:17.98:0,18,148	0/1:19,1:14:19.71:20,0,70	0/1:6,0:6:4.47:4,0,19	0/0:23,0:23:55:0,55,506	0/0:18,0:18:50.89:0,51,412	0/0:11,0:11:29.96:0,30,244	0/0:27,0:27:56.87:0,57,465	0/0:11,0:11:26.97:0,27,222	0/0:23,1:24:27.51:0,28,420	0/0:19,0:19:40.96:0,41,376	0/0:20,0:20:50.91:0,51,415	0/0:14,1:15:6.97:0,7,264	0/0:20,0:20:50.89:0,51,419	0/0:24,0:24:59.91:0,60,493	0/0:13,0:13:38.94:0,39,317	1/1:3,24:28:44.40:662,44,0	0/0:20,0:20:53.91:0,54,440	0/0:12,0:12:26.94:0,27,220	0/0:13,0:13:35.96:0,36,296	0/0:15,0:15:32.88:0,33,262	0/0:21,0:22:49.96:0,50,400	0/0:15,0:15:41.93:0,42,342	0/0:11,0:11:23.96:0,24,197	0/0:18,0:19:55.97:0,56,449	0/0:4,0:25:41.21:0,41,119	0/0:4,0:21:32.59:0,33,94	0/0:0,0:8:12.22:0,12,35
chr10	5528691	.	G	GAGAC	585.15	PASS	AB=0.857;AC=3;AF=0.054;AN=56;BaseQRankSum=3.409;DP=656;FS=0.000;HRun=0;HaplotypeScore=131.1575;InbreedingCoeff=-0.0583;MQ=70.81;MQ0=0;MQRankSum=-4.852;QD=8.61;ReadPosRankSum=-3.331;VQSLOD=2.1420;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:50,1:51:32.86:0,33,1867	0/0:7,0:7:21.07:0,21,386	0/0:16,0:16:40.01:0,40,678	0/0:14,0:14:35.30:0,35,573	0/0:17,0:17:48.10:0,48,816	0/0:16,0:16:42.14:0,42,773	0/0:39,0:39:99:0,105,1890	0/0:26,0:26:60.21:0,60,1095	0/0:17,0:17:51.17:0,51,921	0/0:14,0:14:36.12:0,36,640	0/0:13,0:13:39.13:0,39,703	0/0:41,0:41:99:0,117,2122	0/0:20,0:20:57.20:0,57,1047	0/0:28,0:28:81.23:0,81,1377	0/0:22,0:22:54.19:0,54,986	0/1:13,6:19:99:429,0,451	0/1:28,5:33:99:219,0,1010	0/0:37,0:37:99:0,108,1917	0/1:15,1:16:36.76:37,0,641	0/0:8,0:8:15.04:0,15,246	0/0:89,0:88:99:0,238,4302	0/0:11,0:11:27.09:0,27,490	0/0:18,0:18:51.16:0,51,896	0/0:36,0:36:99:0,105,1894	0/0:15,0:15:39.13:0,39,706	0/0:12,0:12:36.12:0,36,662	0/0:3,0:14:15.05:0,15,255	0/0:7,0:7:18.06:0,18,331
chr10	5528709	.	GAGAC	G	89.12	PASS	AB=0.846;AC=2;AF=0.036;AN=56;BaseQRankSum=3.011;DP=614;FS=1.411;HRun=0;HaplotypeScore=117.2535;InbreedingCoeff=-0.0440;MQ=70.37;MQ0=0;MQRankSum=0.452;QD=4.24;ReadPosRankSum=-2.819;VQSLOD=1.4947;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:42:99:0,108,2724	0/0:10,0:10:30.09:0,30,727	0/0:18,0:18:44.90:0,45,997	0/0:18,0:18:42.19:0,42,976	0/0:9,0:9:18.05:0,18,420	0/0:12,0:12:33.10:0,33,772	0/0:37,0:37:99:0,105,2687	0/0:23,0:23:66.23:0,66,1681	0/0:24,0:24:72.25:0,72,1900	0/0:16,0:16:45.09:0,45,1081	0/0:7,0:7:18.06:0,18,461	0/0:39,0:39:99:0,102,2668	0/0:21,0:21:57.20:0,57,1502	0/0:26,0:26:75.26:0,75,1980	0/0:20,0:20:60.21:0,60,1541	0/0:25,0:25:75.26:0,75,1926	0/0:29,0:29:75.24:0,75,1877	0/0:39,0:39:99:0,108,2851	0/0:19,0:19:57.20:0,57,1409	0/0:11,0:11:26.80:0,27,684	0/0:70,0:69:99:0,189,4840	0/0:16,0:16:45.14:0,45,1068	0/0:11,0:11:27.09:0,27,697	0/0:35,0:35:99:0,99,2545	0/0:13,0:13:39.13:0,39,993	0/1:5,4:9:99:157,0,290	0/1:12,0:12:19.51:20,0,105	0/0:3,0:3:3.01:0,3,78
chr10	5530131	.	A	ACG	277.48	PASS	AB=0.882;AC=4;AF=0.071;AN=56;BaseQRankSum=3.398;DP=620;FS=8.121;HRun=0;HaplotypeScore=88.5654;InbreedingCoeff=-0.0739;MQ=67.13;MQ0=13;MQRankSum=-1.070;QD=3.96;ReadPosRankSum=0.902;VQSLOD=1.5609;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:3,24:27:19.35:330,0,19	0/1:5,0:5:4.88:5,0,109	0/0:46,0:24:52.22:0,52,541	0/0:41,0:21:56.90:0,57,592	0/0:11,0:11:26.91:0,27,302	0/0:23,0:23:62.93:0,63,668	0/0:26,0:25:68.22:0,68,686	0/0:24,0:23:65.25:0,65,615	0/0:25,0:25:57:0,57,600	0/0:16,0:16:39.05:0,39,416	0/0:11,0:9:17.99:0,18,170	0/0:27,0:27:52.18:0,52,798	0/0:23,0:23:53.90:0,54,627	0/0:18,0:18:44.66:0,45,511	0/1:18,0:18:32.62:33,0,185	0/0:16,0:16:39.05:0,39,471	0/1:20,0:20:9.01:9,0,156	0/0:30,0:30:84.39:0,84,896	0/0:17,0:16:40.28:0,40,401	0/0:20,0:20:33.26:0,33,512	0/0:43,0:43:92.54:0,93,987	0/0:21,0:21:53.74:0,54,581	0/0:7,0:7:14.98:0,15,161	0/0:44,0:43:99:0,105,1261	0/0:16,0:16:1.11:0,1,171	0/0:21,0:21:54.22:0,54,508	0/0:13,0:11:30.03:0,30,351	0/0:11,0:11:33.08:0,33,457
chr10	5531263	.	A	AT	818.06	PASS	AB=0.967;AC=5;AF=0.089;AN=56;BaseQRankSum=-5.214;DP=516;FS=2.427;HRun=7;HaplotypeScore=55.1197;InbreedingCoeff=0.7581;MQ=72.04;MQ0=1;MQRankSum=0.933;QD=12.99;ReadPosRankSum=-0.414;VQSLOD=2.5333;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:40,1:41:99:0,111,1062	0/0:12,0:12:27.04:0,27,261	0/0:18,0:13:14.25:0,14,175	0/1:28,0:17:20.91:21,0,43	0/0:26,0:26:66.09:0,66,637	0/0:27,0:27:72.11:0,72,695	0/0:16,0:16:39.05:0,39,371	0/0:27,0:27:69.10:0,69,666	0/0:5,0:5:12.01:0,12,116	0/0:25,0:25:63.08:0,63,605	0/0:13,0:13:27.04:0,27,261	0/0:18,0:18:45.07:0,45,435	0/0:11,0:11:30.03:0,30,284	0/0:10,0:10:30.05:0,30,290	1/1:3,9:12:21.06:254,21,0	0/0:9,0:9:21.03:0,21,203	0/0:28,0:28:78.12:0,78,753	0/0:19,0:19:54.05:0,54,513	0/0:32,0:32:90.14:0,90,869	0/0:18,0:18:45.06:0,45,429	0/0:12,0:12:27.04:0,27,261	0/0:7,0:7:21.02:0,21,197	0/0:12,0:12:27.04:0,27,261	0/0:11,0:11:27.04:0,27,261	1/1:1,20:22:57.13:672,57,0	0/0:18,0:18:48.07:0,48,463	0/0:20,0:20:51.07:0,51,487	0/0:17,0:17:45.07:0,45,434
chr10	5531538	.	AT	A	6843.95	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=14.303;DP=642;FS=13.604;HRun=3;HaplotypeScore=60.6797;InbreedingCoeff=0.9974;MQ=94.22;MQ0=0;MQRankSum=-6.771;QD=34.05;ReadPosRankSum=3.425;VQSLOD=4.2306;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,24:24:60.19:740,60,0	0/0:5,0:5:15.04:0,15,198	0/0:27,0:28:54.32:0,54,1076	0/0:34,0:34:98.35:0,98,1341	0/0:28,0:28:78.26:0,78,1122	0/0:22,0:22:66.21:0,66,932	0/0:27,0:27:81.27:0,81,1165	0/0:27,0:27:78.26:0,78,1123	0/0:17,0:17:51.17:0,51,734	0/0:26,0:26:75.24:0,75,1043	0/0:16,0:16:45.15:0,45,647	0/0:23,0:23:69.22:0,69,975	0/0:30,0:30:90.30:0,90,1291	0/0:21,0:21:60.20:0,60,863	0/0:25,0:25:72.23:0,72,1018	1/1:1,21:22:36.27:717,36,0	1/1:0,14:14:36.11:446,36,0	0/0:17,0:17:51.17:0,51,734	1/1:2,17:19:51.16:632,51,0	1/1:1,28:29:84.26:1041,84,0	0/0:26,0:26:78.26:0,78,1121	1/1:0,23:23:63.20:781,63,0	0/0:24,0:24:69.23:0,69,993	0/0:27,0:27:78.25:0,78,1104	0/0:18,0:18:54.18:0,54,777	1/1:2,23:25:29.01:812,29,0	1/1:0,28:28:84.26:1041,84,0	1/1:0,17:17:51.16:632,51,0
chr10	5533911	.	TCC	T	234.26	PASS	AC=10;AF=0.217;AN=46;BaseQRankSum=2.495;DP=81;FS=2.665;HRun=3;HaplotypeScore=14.6552;InbreedingCoeff=0.5116;MQ=54.16;MQ0=1;MQRankSum=-1.788;QD=18.02;ReadPosRankSum=1.020;VQSLOD=1.0178;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:9:21.06:0,21,313	./.	0/0:8,0:3:9.03:0,9,137	0/0:3,0:1:3.01:0,3,58	0/0:3,0:3:9.03:0,9,173	0/0:1,0:1:3.01:0,3,58	0/0:2,0:2:6.02:0,6,114	0/0:2,0:1:3.01:0,3,58	0/0:4,0:4:12.04:0,12,215	0/0:1,0:1:3.01:0,3,58	1/1:2,0:2:2.04:6,2,0	0/0:4,0:4:10.85:0,11,163	./.	./.	0/0:3,0:3:9.03:0,9,173	1/1:0,3:3:9.03:129,9,0	0/0:6,0:6:15.05:0,15,272	0/0:1,0:1:3.01:0,3,58	1/1:1,1:2:5.95:59,6,0	1/1:0,2:2:6.02:90,6,0	0/0:5,0:5:9.03:0,9,158	1/1:2,1:4:5.45:76,5,0	0/0:2,0:2:6.02:0,6,95	./.	0/0:3,0:3:3.01:0,3,58	0/0:3,0:3:9.02:0,9,142	0/0:3,0:3:9.03:0,9,171	./.
chr10	5534238	.	A	AG	1093.96	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-6.446;DP=539;FS=2.566;HRun=1;HaplotypeScore=49.9367;InbreedingCoeff=0.9526;MQ=95.96;MQ0=0;MQRankSum=-2.965;QD=37.72;ReadPosRankSum=1.559;VQSLOD=4.0780;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:93.28:0,93,1186	0/0:3,0:3:9.03:0,9,117	0/0:32,0:32:93.28:0,93,1172	0/0:20,0:20:54.15:0,54,666	0/0:9,0:9:27.09:0,27,351	0/0:25,0:25:72.22:0,72,921	0/0:29,0:29:87.28:0,87,1129	0/0:28,0:28:84.27:0,84,1091	0/0:23,0:23:69.22:0,69,896	0/0:17,0:17:51.16:0,51,657	0/0:6,0:6:15.05:0,15,195	0/0:21,0:21:63.19:0,63,804	0/0:17,0:17:48.16:0,48,621	0/0:18,0:18:54.16:0,54,687	1/1:0,21:21:63.21:944,63,0	0/0:16,0:16:45.13:0,45,558	0/0:27,0:27:81.26:0,81,1052	0/0:19,0:19:54.18:0,54,701	0/0:14,0:14:39.12:0,39,493	0/0:8,0:8:21.07:0,21,273	0/0:35,0:35:99:0,105,1348	0/0:14,0:14:42.14:0,42,545	0/0:9,0:9:21.07:0,21,273	0/0:21,0:21:63.20:0,63,817	1/1:1,7:8:18.06:269,18,0	0/0:22,0:22:60.19:0,60,779	0/0:37,0:37:99:0,105,1344	0/0:7,0:7:21.07:0,21,273
chr10	5534559	.	T	TCGTG	14579.53	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-8.721;DP=485;FS=6.173;HRun=0;HaplotypeScore=74.9118;InbreedingCoeff=0.9034;MQ=67.45;MQ0=1;MQRankSum=-1.438;QD=35.39;ReadPosRankSum=5.040;VQSLOD=4.3795;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,14:24:33.11:810,33,0	1/1:6,4:10:12.01:293,12,0	0/0:30,0:26:40.87:0,41,567	0/0:20,0:18:27.16:0,27,459	1/1:0,4:9:9.03:221,9,0	1/1:6,18:26:45.15:1105,45,0	1/1:6,14:22:27.09:661,27,0	1/1:8,9:23:45.09:759,45,0	1/1:4,6:10:15.05:368,15,0	1/1:6,11:18:38.86:810,39,0	1/1:2,4:8:9.03:221,9,0	1/1:3,11:15:27.09:662,27,0	1/1:4,5:9:12.04:289,12,0	1/1:0,19:20:39.13:957,39,0	0/0:7,0:7:21.04:0,21,295	1/1:2,7:9:12.04:295,12,0	1/1:9,23:35:51.18:1253,51,0	1/1:7,14:22:24.08:590,24,0	1/1:7,7:14:20.94:424,21,0	1/1:5,4:11:12.04:295,12,0	1/1:13,22:34:48.13:1176,48,0	1/1:4,9:15:27.06:650,27,0	1/1:4,10:14:20.74:516,21,0	1/1:11,21:36:53.64:1314,54,0	0/0:16,0:16:33.11:0,33,547	1/1:5,6:12:11.61:379,12,0	1/1:3,6:9:11.93:237,12,0	1/1:0,6:6:12.04:295,12,0
chr10	5535414	.	GT	G	2431.99	PASS	AB=0.988;AC=14;AF=0.250;AN=56;BaseQRankSum=7.915;DP=549;FS=1.904;HRun=2;HaplotypeScore=86.0779;InbreedingCoeff=0.6248;MQ=83.08;MQ0=0;MQRankSum=0.199;QD=14.31;ReadPosRankSum=0.804;VQSLOD=3.1616;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:70.38:0,70,995	0/0:10,0:10:27.08:0,27,372	0/0:35,0:33:75.51:0,76,873	0/0:19,0:15:27.88:0,28,297	0/0:27,0:27:75.14:0,75,1009	0/0:17,0:17:48.13:0,48,659	0/0:17,0:17:48.06:0,48,611	0/0:31,0:31:87.26:0,87,1212	0/0:14,0:14:41.46:0,41,511	0/0:16,0:16:48.14:0,48,674	0/0:17,0:17:42.10:0,42,540	0/0:17,0:17:51.12:0,51,663	0/0:23,0:23:54.12:0,54,691	0/0:15,0:15:39.06:0,39,501	1/1:15,0:15:32.84:247,33,0	0/1:9,0:9:10.60:11,0,45	0/0:21,0:21:60.18:0,60,854	0/0:14,0:14:39.07:0,39,503	0/1:19,1:20:36.66:60,0,37	0/1:32,0:32:75.96:76,0,90	0/0:19,0:19:54.11:0,54,704	0/1:20,0:20:53.75:81,0,54	0/0:17,0:17:48.04:0,48,634	0/0:21,0:21:54.09:0,54,717	1/1:22,0:22:53.63:396,54,0	1/1:9,12:21:57.12:649,57,0	1/1:0,20:20:54.14:674,54,0	1/1:0,11:11:33.11:424,33,0
chr10	5535415	.	TTA	T	1727.94	PASS	AB=1.000;AC=14;AF=0.250;AN=56;BaseQRankSum=7.778;DP=550;FS=2.494;HRun=0;HaplotypeScore=96.6585;InbreedingCoeff=0.6412;MQ=82.24;MQ0=0;MQRankSum=-0.719;QD=10.22;ReadPosRankSum=1.055;VQSLOD=3.4396;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:75.17:0,75,1360	0/0:9,0:9:27.09:0,27,514	0/0:36,0:33:72.04:0,72,1132	0/0:19,0:14:17.50:0,17,415	0/0:28,0:28:78.63:0,79,1359	0/0:17,0:17:48.13:0,48,865	0/0:17,0:17:51.12:0,51,912	0/0:31,0:31:87.26:0,87,1588	0/0:14,0:14:42.08:0,42,700	0/0:16,0:16:48.15:0,48,903	0/0:17,0:17:42.12:0,42,711	0/0:17,0:17:51.13:0,51,868	0/0:22,0:22:60.14:0,60,964	0/0:15,0:15:45.11:0,45,734	1/1:0,15:15:33.11:534,33,0	0/1:10,0:10:9.47:9,0,148	0/0:22,0:22:66.18:0,66,1240	0/0:14,0:14:39.10:0,39,690	0/1:19,0:19:5.58:6,0,247	0/1:33,0:33:38.51:39,0,437	0/0:19,0:19:54.16:0,54,977	0/1:21,0:21:65.17:65,0,277	0/0:17,0:17:48.13:0,48,835	0/0:21,0:21:54.11:0,54,970	1/1:0,21:21:54.18:865,54,0	1/1:19,0:19:42.91:225,43,0	1/1:20,0:20:34.66:111,35,0	1/1:11,0:11:20.21:59,20,0
chr10	5535435	.	T	TTCTCTCTC	4020.19	PASS	AB=0.983;AC=38;AF=0.704;AN=54;BaseQRankSum=-2.060;DP=594;FS=12.302;HRun=0;HaplotypeScore=198.0004;InbreedingCoeff=0.4064;MQ=62.52;MQ0=10;MQRankSum=-3.339;QD=8.46;ReadPosRankSum=-3.956;VQSLOD=0.1961;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:28:5.78:242,6,0	0/1:7,0:7:0:0,0,0	0/1:25,0:17:0:0,0,0	./.	1/1:35,0:34:15.04:311,15,0	1/1:22,0:22:15:215,15,0	1/1:23,0:21:12.01:149,12,0	1/1:34,0:32:14.66:121,15,0	0/1:17,0:17:58.43:264,0,58	1/1:21,0:18:15.05:292,15,0	1/1:19,0:19:3.01:50,3,0	1/1:25,0:25:11.92:295,12,0	1/1:16,4:21:12.51:321,13,0	1/1:10,3:15:6.02:226,6,0	0/1:16,0:15:26.78:156,0,27	0/0:9,0:9:12.04:0,12,270	0/0:24,0:24:30.09:0,30,650	0/1:16,1:17:23.76:329,0,24	0/0:21,0:20:2.90:0,3,16	0/0:25,0:25:14.82:0,15,268	1/1:23,0:23:15.05:264,15,0	0/0:17,0:17:17.97:0,18,242	0/1:20,0:21:7.96:108,0,8	1/1:24,0:23:5.67:253,6,0	1/1:20,0:20:2.64:48,3,0	1/1:14,0:14:8.24:145,8,0	1/1:20,0:21:12.02:159,12,0	1/1:24,0:20:6.02:72,6,0
chr10	5535484	.	T	TC	3017.50	PASS	AB=0.900;AC=19;AF=0.339;AN=56;BaseQRankSum=-6.753;DP=517;FS=0.953;HRun=5;HaplotypeScore=88.4342;InbreedingCoeff=0.8764;MQ=69.70;MQ0=16;MQRankSum=-3.129;QD=21.71;ReadPosRankSum=2.486;VQSLOD=2.6800;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:22:39.07:0,39,417	0/0:5,0:5:15.04:0,15,160	0/0:37,0:24:7.97:0,8,508	0/0:37,0:22:59.63:0,60,573	0/0:23,0:23:47.88:0,48,515	0/0:19,0:18:37.51:0,38,442	0/0:23,0:20:48.12:0,48,514	0/0:24,0:23:54.11:0,54,561	0/1:8,1:9:12.48:12,0,209	0/0:18,0:16:39.09:0,39,419	0/0:12,0:12:11.86:0,12,128	0/0:18,0:18:44.49:0,44,464	0/0:18,0:17:38.82:0,39,356	0/0:11,0:11:26.84:0,27,266	1/1:9,3:11:18.86:204,19,0	1/1:4,12:16:33.09:420,33,0	0/0:26,0:26:60.11:0,60,625	0/0:17,0:16:33.08:0,33,352	1/1:2,9:11:27.07:337,27,0	1/1:5,13:17:33.11:434,33,0	0/0:18,0:18:33.07:0,33,353	1/1:4,16:18:36.01:450,36,0	0/0:15,0:15:33.08:0,33,351	0/0:33,0:31:60.12:0,60,631	1/1:8,3:7:3.01:38,3,0	1/1:2,17:18:18.96:597,19,0	1/1:3,7:10:30.08:378,30,0	1/1:4,9:10:27.56:356,28,0
chr10	5536318	.	T	TC	2971.95	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=16.774;DP=770;FS=6.523;HRun=1;HaplotypeScore=110.9916;InbreedingCoeff=0.9986;MQ=84.58;MQ0=0;MQRankSum=-15.758;QD=25.40;ReadPosRankSum=1.902;VQSLOD=3.4133;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,160,2051	0/0:8,0:8:24.05:0,24,294	0/0:29,0:29:78.24:0,78,992	0/0:25,0:25:69.21:0,69,861	0/0:25,0:25:72.17:0,72,934	0/0:26,0:26:75.22:0,75,945	0/0:44,0:44:99:0,132,1655	0/0:33,0:32:96.30:0,96,1234	0/0:28,0:28:84.26:0,84,1074	0/0:27,0:27:81.25:0,81,1019	0/0:15,0:15:42.06:0,42,513	0/0:35,0:35:99:0,102,1307	0/0:22,0:22:63.20:0,63,805	0/0:26,0:26:75.23:0,75,959	1/1:4,17:21:59.48:524,59,0	0/0:23,0:23:69.22:0,69,896	0/0:27,0:27:75.23:0,75,958	0/0:17,0:17:48.16:0,48,623	0/0:28,0:28:81.25:0,81,1039	0/0:18,0:18:54.18:0,54,701	0/0:52,0:52:99:0,150,1946	0/0:32,0:32:93.30:0,93,1196	0/0:21,0:21:57.18:0,57,739	0/0:37,0:37:99:0,111,1440	1/1:5,20:25:68.77:622,69,0	1/1:6,32:38:99:1067,112,0	1/1:3,23:26:78.02:734,78,0	1/1:1,6:7:21.02:200,21,0
chr10	5536319	.	C	CA	1599.46	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=16.313;DP=768;FS=7.729;HRun=0;HaplotypeScore=111.9866;InbreedingCoeff=0.9973;MQ=85.81;MQ0=0;MQRankSum=-15.568;QD=14.67;ReadPosRankSum=3.023;VQSLOD=5.2949;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,160,2223	0/0:9,0:9:24.08:0,24,334	0/0:30,0:30:84.25:0,84,1153	0/0:26,0:26:69.22:0,69,936	0/0:27,0:27:72.17:0,72,1007	0/0:26,0:26:75.22:0,75,1015	0/0:44,0:44:99:0,132,1818	0/0:33,0:32:99:0,99,1354	0/0:28,0:28:84.26:0,84,1157	0/0:27,0:27:81.27:0,81,1130	0/0:15,0:15:45.14:0,45,604	0/0:35,0:35:99:0,102,1404	0/0:22,0:22:66.19:0,66,902	0/0:26,0:26:78.23:0,78,1069	1/1:19,0:19:51.97:297,52,0	0/0:23,0:23:69.23:0,69,965	0/0:26,0:26:75.25:0,75,1048	0/0:18,0:18:48.16:0,48,671	0/0:28,0:28:84.27:0,84,1160	0/0:18,0:18:54.18:0,54,755	0/0:51,0:51:99:0,153,2121	0/0:32,0:32:93.31:0,93,1300	0/0:22,0:22:57.19:0,57,797	0/0:38,0:38:99:0,111,1552	1/1:23,0:23:64.59:411,65,0	1/1:33,0:33:95.48:522,95,0	1/1:23,4:27:72.77:448,73,0	1/1:7,0:7:17.35:96,17,0
chr10	5536320	.	T	TATCAG	9325.10	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=15.478;DP=782;FS=10.772;HRun=0;HaplotypeScore=155.2042;InbreedingCoeff=0.9988;MQ=86.08;MQ0=0;MQRankSum=-15.809;QD=76.44;ReadPosRankSum=2.579;VQSLOD=6.2779;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:56:99:0,163,3653	0/0:9,0:9:27.07:0,27,572	0/0:31,0:31:90.26:0,90,1918	0/0:27,0:27:72.19:0,72,1510	0/0:28,0:28:78.20:0,78,1728	0/0:25,0:25:69.24:0,69,1588	0/0:43,0:43:99:0,129,2897	0/0:32,0:31:96.31:0,96,2131	0/0:27,0:27:81.28:0,81,1859	0/0:27,0:27:81.28:0,81,1871	0/0:15,0:15:45.15:0,45,1027	0/0:36,0:36:99:0,99,2232	0/0:22,0:22:66.23:0,66,1513	0/0:26,0:26:78.27:0,78,1785	1/1:4,17:21:60.19:1592,60,0	0/0:23,0:23:69.24:0,69,1608	0/0:26,0:26:75.26:0,75,1748	0/0:18,0:18:48.16:0,48,1119	0/0:28,0:28:84.29:0,84,1939	0/0:18,0:18:54.19:0,54,1258	0/0:52,0:52:99:0,154,3443	0/0:32,0:32:96.31:0,96,2171	0/0:21,0:21:60.19:0,60,1352	0/0:38,0:38:99:0,114,2611	1/1:6,20:26:71.57:1964,72,0	1/1:3,32:35:99:2781,102,0	1/1:10,22:33:87.30:2421,87,0	1/1:1,6:7:21.07:567,21,0
chr10	5537891	.	GTGTGTGTA	G	1800.15	PASS	AB=0.951;AC=21;AF=0.375;AN=56;BaseQRankSum=5.522;DP=381;FS=16.848;HRun=0;HaplotypeScore=110.4978;InbreedingCoeff=-0.2895;MQ=42.14;MQ0=32;MQRankSum=-4.479;QD=6.55;ReadPosRankSum=0.290;VQSLOD=0.7480;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:16:22.30:0,22,364	1/1:3,0:3:5.61:84,6,0	1/1:10,0:1:1.25:3,1,0	0/0:12,0:1:2.88:0,3,15	0/0:14,2:16:13.23:0,13,89	0/1:15,2:16:73.87:208,0,74	0/1:21,2:22:94.96:95,0,286	0/1:17,0:15:0.79:1,0,187	0/1:14,3:17:24.55:336,0,25	0/1:10,7:17:99:142,0,142	0/0:11,1:12:14.65:0,15,107	0/1:10,0:9:22.50:23,0,71	0/1:6,2:8:35.94:70,0,36	0/1:14,0:13:7.14:291,0,7	0/1:11,0:11:7.86:150,0,8	0/0:13,0:11:17.24:0,17,617	0/1:22,0:18:27.25:194,0,27	0/1:17,0:15:27.48:27,0,123	0/0:8,0:6:14.81:0,15,176	0/0:5,0:5:9.80:0,10,146	0/1:25,0:23:12.29:12,0,203	0/0:15,0:13:12.02:0,12,326	0/1:15,0:13:77.92:102,0,78	0/1:16,0:15:36.99:85,0,37	0/1:6,0:4:1.95:75,0,2	0/1:17,0:17:7.42:7,0,228	0/1:10,0:7:52.02:52,0,150	0/0:8,0:6:14.99:0,15,216
chr10	5537909	.	G	GA	735.08	PASS	AB=0.865;AC=13;AF=0.232;AN=56;BaseQRankSum=0.758;DP=397;FS=1.576;HRun=1;HaplotypeScore=94.0951;InbreedingCoeff=0.4908;MQ=40.14;MQ0=53;MQRankSum=-1.507;QD=7.82;ReadPosRankSum=0.072;VQSLOD=0.7328;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:13:26.13:0,26,292	0/0:4,0:4:6.02:0,6,78	0/0:10,0:1:2.37:0,2,8	0/0:17,0:1:2.80:0,3,13	0/0:16,0:14:12.03:0,12,168	0/0:20,0:18:34.44:0,34,382	0/0:20,0:19:48.51:0,49,624	0/0:20,0:16:39.05:0,39,480	0/0:20,0:18:25.13:0,25,248	0/0:16,0:16:35.78:0,36,411	0/0:15,0:15:15.05:0,15,209	0/0:14,0:13:14.97:0,15,180	0/0:7,0:6:12.04:0,12,164	0/0:12,0:11:14.51:0,15,115	1/1:4,9:13:14.45:114,14,0	0/0:13,0:11:14.60:0,15,95	0/0:22,0:16:39.03:0,39,469	0/0:15,0:14:30.07:0,30,381	1/1:5,0:4:2.69:9,3,0	1/1:7,0:6:2.97:10,3,0	0/0:21,0:17:31.35:0,31,422	0/0:10,0:9:5.50:0,6,34	0/0:14,0:13:15:0,15,187	0/1:14,0:11:3.98:4,0,60	1/1:5,4:6:3.91:54,4,0	0/1:6,12:19:14.13:377,0,14	0/1:15,0:13:4.74:194,0,5	1/1:9,3:4:3.04:118,3,0
chr10	5537914	.	GGAGAGAGAGAGA	G	1247.29	PASS	AB=0.967;AC=20;AF=0.435;AN=46;BaseQRankSum=2.121;DP=400;FS=3.700;HRun=0;HaplotypeScore=126.4875;InbreedingCoeff=0.5733;MQ=40.53;MQ0=54;MQRankSum=-0.718;QD=6.93;ReadPosRankSum=0.006;VQSLOD=2.0944;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:12:9.03:0,9,214	./.	./.	./.	1/1:13,3:14:2.51:38,3,0	1/1:19,4:21:5.96:65,6,0	1/1:21,0:20:13.28:254,13,0	0/0:22,0:17:2.37:0,2,8	1/1:17,2:17:11.69:249,12,0	1/1:11,0:11:2.28:19,2,0	1/1:12,4:16:5.99:61,6,0	1/1:10,5:13:5.46:142,5,0	./.	1/1:8,2:10:5.65:93,6,0	0/0:14,0:14:14.92:0,15,440	0/0:12,0:10:9.03:0,9,165	0/0:22,0:17:21.07:0,21,882	1/1:11,2:15:13.77:473,14,0	0/0:7,0:6:13.86:0,14,344	0/0:8,0:7:3.01:0,3,97	0/1:19,0:15:0:0,0,0	0/0:8,0:8:6.02:0,6,141	0/0:15,0:14:0.47:0,0,1	0/1:13,1:11:8.97:9,0,233	0/0:9,0:6:1.91:0,2,122	0/0:19,0:20:29.44:0,29,1058	0/0:16,0:14:16.27:0,16,387	./.
chr10	5537915	.	GA	G	381.54	PASS	AB=0.888;AC=12;AF=0.214;AN=56;BaseQRankSum=4.065;DP=406;FS=1.844;HRun=1;HaplotypeScore=87.5482;InbreedingCoeff=0.3665;MQ=40.60;MQ0=52;MQRankSum=-2.274;QD=3.82;ReadPosRankSum=-2.484;VQSLOD=-0.5956;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:15:19.84:0,20,195	0/0:4,0:4:5.96:0,6,45	0/0:9,0:1:3:0,3,25	0/0:16,0:1:2.90:0,3,16	0/0:15,1:14:12:0,12,116	0/0:23,0:21:29.26:0,29,266	0/0:22,0:21:47.54:0,48,443	0/0:22,0:17:32.92:0,33,300	0/0:19,0:17:17.07:0,17,150	0/0:11,0:11:29.97:0,30,267	0/0:16,0:16:15.02:0,15,143	0/0:15,0:13:9.89:0,10,88	0/0:7,0:5:12.01:0,12,110	0/0:10,0:10:5.07:0,5,55	1/1:11,4:15:10.57:113,11,0	0/0:7,4:9:3.46:0,3,40	0/0:23,0:18:42.04:0,42,438	0/0:16,0:15:18.62:0,19,153	0/1:9,0:8:22.32:22,0,37	1/1:8,1:8:3.48:36,3,0	0/0:18,0:14:29.12:0,29,286	0/1:6,3:8:7.72:20,0,8	0/0:15,0:14:12.24:0,12,115	0/0:14,0:11:2.25:0,2,88	1/1:6,3:6:7.78:62,8,0	0/1:18,1:19:85.65:86,0,86	0/1:14,3:15:13.36:119,0,13	1/1:13,0:5:9.78:78,10,0
chr10	5537964	.	T	TG	920.84	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-4.140;DP=386;FS=4.573;HRun=7;HaplotypeScore=62.9254;InbreedingCoeff=0.9320;MQ=76.01;MQ0=14;MQRankSum=-0.833;QD=21.41;ReadPosRankSum=-1.666;VQSLOD=2.7137;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:30.03:0,30,286	0/0:6,0:6:15.02:0,15,145	0/0:29,0:22:39.20:0,39,488	0/0:17,0:13:39.04:0,39,368	0/0:17,0:17:42.03:0,42,394	0/0:15,0:15:33.04:0,33,312	0/0:17,0:17:42.05:0,42,404	0/0:25,0:25:51.06:0,51,489	0/0:2,0:8:7.65:0,8,32	0/0:7,0:6:15.02:0,15,145	0/0:12,0:12:30.02:0,30,283	0/0:17,0:17:38.97:0,39,365	0/0:10,0:9:21.03:0,21,202	0/0:15,0:15:45.07:0,45,434	0/0:23,0:23:57.09:0,57,550	0/0:5,0:5:12.02:0,12,116	0/0:19,0:16:39.06:0,39,376	0/0:11,0:11:29.72:0,30,271	0/0:14,0:12:21.03:0,21,203	0/0:9,0:9:27.03:0,27,255	0/0:12,0:10:30.05:0,30,290	0/0:9,0:9:12.01:0,12,116	0/0:7,0:7:18.01:0,18,168	0/0:15,0:13:18:0,18,174	0/0:10,0:10:30.05:0,30,290	1/1:8,10:18:33.10:398,33,0	1/1:1,11:12:27.08:326,27,0	1/1:1,12:12:30.07:338,30,0
chr10	5538434	.	GGT	G	451.76	PASS	AB=0.886;AC=18;AF=0.321;AN=56;BaseQRankSum=4.524;DP=652;FS=11.055;HRun=0;HaplotypeScore=100.6061;InbreedingCoeff=-0.2768;MQ=64.04;MQ0=10;MQRankSum=0.992;QD=1.14;ReadPosRankSum=0.613;VQSLOD=1.1468;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:20.95:0,21,183	0/1:8,2:11:40.75:41,0,267	0/1:31,0:22:2.89:3,0,60	0/0:21,0:15:2.82:0,3,23	0/1:22,8:30:53.35:53,0,469	0/1:20,1:22:18.81:19,0,397	0/1:19,6:25:65.62:66,0,377	1/1:16,0:23:19.64:93,20,0	0/1:17,2:20:36.82:37,0,493	0/1:27,4:32:95.96:96,0,467	0/1:13,3:16:40.74:41,0,264	0/1:17,2:19:22.69:23,0,532	0/1:16,0:16:57.29:57,0,364	0/1:17,3:20:6.82:7,0,337	0/0:18,0:26:15:0,15,131	0/1:15,3:19:37.75:38,0,318	0/0:15,0:22:21.02:0,21,210	0/0:14,0:23:35.97:0,36,362	0/0:19,0:19:11.72:0,12,146	0/1:24,4:28:22.69:23,0,526	0/1:33,5:37:4.61:5,0,737	0/1:26,1:29:2.01:2,0,687	0/1:13,1:13:6.80:7,0,332	0/0:25,1:26:35.30:0,35,935	0/0:15,0:20:11:0,11,95	0/0:21,0:27:56.69:0,57,493	0/0:15,0:23:17.66:0,18,134	0/0:11,0:15:18.03:0,18,202
chr10	5539624	.	T	TACACAC	2628.36	PASS	AB=0.985;AC=42;AF=0.875;AN=48;BaseQRankSum=-1.140;DP=487;FS=1.612;HRun=0;HaplotypeScore=140.5778;InbreedingCoeff=0.2784;MQ=60.10;MQ0=15;MQRankSum=-2.388;QD=7.10;ReadPosRankSum=-1.076;VQSLOD=2.1382;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:32,0:31:2.65:22,3,0	1/1:8,0:8:0.89:2,1,0	./.	./.	1/1:19,0:18:5.75:53,6,0	1/1:15,0:15:12.04:308,12,0	1/1:30,0:29:11.73:245,12,0	1/1:16,0:14:3.87:24,4,0	1/1:18,0:18:2.80:55,3,0	1/1:12,0:10:8.68:113,9,0	0/1:5,0:4:0:0,0,0	1/1:15,0:15:3.01:58,3,0	1/1:14,0:13:9.03:160,9,0	1/1:16,0:16:8.92:187,9,0	./.	1/1:19,0:19:9.50:179,10,0	0/1:32,0:31:37.30:37,0,89	1/1:14,0:14:12.01:259,12,0	1/1:11,0:10:9.03:173,9,0	1/1:9,0:9:5.75:114,6,0	./.	1/1:18,0:17:5.97:74,6,0	0/0:14,0:14:0.50:0,0,1	1/1:26,0:26:6.02:141,6,0	0/0:11,0:15:12.04:0,12,165	1/1:12,5:18:21.06:404,21,0	1/1:15,0:17:6.02:76,6,0	1/1:5,0:3:5.75:51,6,0
chr10	5541186	.	GACACAC	G	931.30	PASS	AB=0.706;AC=25;AF=0.500;AN=50;BaseQRankSum=4.268;DP=514;FS=41.291;HRun=0;HaplotypeScore=115.2866;InbreedingCoeff=0.5393;MQ=63.46;MQ0=23;MQRankSum=-3.945;QD=4.21;ReadPosRankSum=-0.907;VQSLOD=0.2605;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,1:30:6.02:0,6,85	1/1:0,3:3:2.91:60,3,0	0/0:45,0:16:0:0,0,0	./.	0/0:8,1:13:0:0,0,0	1/1:7,0:9:6.02:84,6,0	1/1:28,0:28:6.02:99,6,0	./.	0/1:7,5:12:23.29:59,0,23	1/1:14,0:14:2.73:24,3,0	1/1:12,1:14:6.01:78,6,0	1/1:9,0:12:6.02:84,6,0	1/1:9,0:12:6.02:84,6,0	1/1:10,5:15:9.03:181,9,0	0/0:16,0:22:9.01:0,9,193	0/0:12,0:13:4.30:0,4,108	0/0:30,0:28:30.06:0,30,743	1/1:15,4:19:12.02:207,12,0	0/0:19,0:17:6.01:0,6,69	./.	1/1:29,0:32:3:45,3,0	0/0:13,0:16:18.06:0,18,270	1/1:9,3:12:3.01:36,3,0	1/1:30,1:34:6.51:52,7,0	0/0:8,0:9:3.01:0,3,79	0/0:8,0:8:12.51:0,13,344	0/0:9,0:10:6.49:0,6,121	0/0:12,0:11:27.07:0,27,572
chr10	5544644	.	C	CAG	324.57	PASS	AB=0.905;AC=5;AF=0.096;AN=52;BaseQRankSum=4.792;DP=466;FS=1.120;HRun=0;HaplotypeScore=66.3339;InbreedingCoeff=-0.0645;MQ=31.65;MQ0=96;MQRankSum=-3.778;QD=4.57;ReadPosRankSum=-2.249;VQSLOD=1.9051;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:21:14.79:0,15,229	0/1:6,0:5:6.83:7,0,14	0/0:13,0:2:6.02:0,6,92	0/0:22,0:2:2.80:0,3,36	0/0:17,0:14:3.01:0,3,46	0/0:16,0:16:10.96:0,11,203	0/1:25,0:16:0.06:0,0,0	0/0:19,0:14:28.22:0,28,298	0/0:11,0:9:5.42:0,5,59	0/0:24,0:14:33.11:0,33,465	./.	0/0:13,0:9:6:0,6,69	0/0:7,0:6:8.98:0,9,84	0/0:12,0:8:9.02:0,9,108	./.	0/0:17,0:9:4.35:0,4,15	0/0:20,0:18:19.71:0,20,260	0/0:15,0:13:14.87:0,15,149	0/0:18,0:13:32.11:0,32,296	0/0:13,0:10:4.95:0,5,90	0/0:37,0:18:14.31:0,14,227	0/0:19,0:16:6:0,6,56	0/0:10,0:9:11.91:0,12,183	0/0:20,0:15:3.01:0,3,32	0/0:20,1:17:2.99:0,3,25	0/1:14,1:12:26.56:264,0,27	0/1:5,12:15:33.03:106,0,33	0/1:8,0:5:15.73:48,0,16
chr10	5544648	.	CAG	C	263.12	PASS	AB=0.995;AC=27;AF=0.519;AN=52;BaseQRankSum=0.806;DP=448;FS=11.723;HRun=0;HaplotypeScore=58.2055;InbreedingCoeff=0.0570;MQ=31.89;MQ0=93;MQRankSum=1.003;QD=0.82;ReadPosRankSum=-1.161;VQSLOD=0.1831;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:21:15.05:0,15,248	1/1:6,0:5:5.20:43,5,0	0/0:13,0:2:6.02:0,6,86	0/0:22,0:2:3.01:0,3,51	0/0:17,0:14:0.89:0,1,2	1/1:15,0:15:8.87:45,9,0	0/1:24,0:15:0.01:0,0,0	0/1:18,0:13:23.03:23,0,80	0/1:12,0:9:4.35:4,0,31	0/1:25,0:14:15.71:16,0,71	./.	1/1:14,0:10:3.74:15,4,0	1/1:6,0:6:3.56:13,4,0	0/1:11,0:7:1.60:21,0,2	./.	1/1:14,3:9:3.37:22,3,0	0/1:19,0:17:6.33:6,0,208	0/1:15,0:13:26.47:26,0,36	0/1:15,1:11:63.27:63,0,148	0/0:11,1:10:8.04:0,8,83	0/1:35,0:17:1.11:1,0,16	1/1:17,2:16:5.87:39,6,0	0/0:9,2:10:5.74:0,6,69	1/1:18,0:14:2.80:13,3,0	1/1:19,0:15:2.85:24,3,0	0/1:13,0:9:3.97:24,0,4	0/1:18,0:16:7.07:7,0,53	0/0:6,0:4:2.03:0,2,7
chr10	5544650	.	GAC	G	519.68	PASS	AB=0.949;AC=21;AF=0.438;AN=48;BaseQRankSum=-1.558;DP=442;FS=6.138;HRun=0;HaplotypeScore=56.6908;InbreedingCoeff=0.2383;MQ=31.94;MQ0=88;MQRankSum=1.169;QD=2.68;ReadPosRankSum=0.649;VQSLOD=0.3596;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:21:14.98:0,15,145	0/0:6,0:5:0.26:0,0,1	0/0:13,0:2:5.97:0,6,45	0/0:22,0:2:3:0,3,26	1/1:17,0:14:2.97:20,3,0	1/1:15,0:15:14.43:107,14,0	0/0:24,0:15:0:0,0,0	1/1:12,0:11:15.97:99,16,0	0/1:12,0:9:13.26:18,0,13	0/1:17,9:15:8.39:154,0,8	./.	1/1:14,0:10:2.99:25,3,0	1/1:5,0:5:5.87:35,6,0	1/1:10,0:7:2.99:23,3,0	./.	0/0:17,0:9:0.83:0,1,10	0/0:19,0:17:18.23:0,18,125	1/1:14,0:13:0.48:15,0,0	0/0:16,0:11:1.79:0,2,94	0/0:13,0:11:8.83:0,9,54	1/1:33,0:16:11.57:92,12,0	./.	0/1:11,0:10:15.93:41,0,16	./.	0/0:17,0:13:0:0,0,0	0/1:15,0:11:19.16:23,0,19	0/0:18,0:16:7.29:0,7,43	0/1:6,0:4:10.47:12,0,10
chr10	5547312	.	AGTGTGTGTGTGTGTGT	A	5169.75	PASS	AB=0.778;AC=30;AF=0.577;AN=52;BaseQRankSum=4.128;DP=657;FS=0.000;HRun=0;HaplotypeScore=240.7421;InbreedingCoeff=0.5237;MQ=54.08;MQ0=34;MQRankSum=-3.558;QD=14.48;ReadPosRankSum=-0.067;VQSLOD=3.3068;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:40:19:0,19,651	1/1:3,5:8:5.85:209,6,0	./.	./.	1/1:10,5:15:6.02:198,6,0	1/1:12,4:17:12.04:444,12,0	1/1:15,13:26:9.01:286,9,0	0/0:24,0:22:15.05:0,15,547	1/1:16,15:31:18.06:671,18,0	1/1:22,9:32:29.11:666,29,0	1/1:7,4:12:3.48:37,3,0	0/1:16,6:21:99:462,0,138	1/1:13,7:20:21.07:919,21,0	1/1:10,10:19:18.06:738,18,0	0/0:16,0:16:8.88:0,9,296	0/1:8,0:20:53.14:87,0,53	0/0:23,0:30:39.61:0,40,1948	0/1:14,0:13:15.96:106,0,16	0/0:16,0:19:15.01:0,15,272	0/1:11,0:16:1.94:2,0,68	1/1:48,0:46:8.18:51,8,0	0/0:10,0:13:5.97:0,6,113	1/1:10,4:14:2.64:131,3,0	1/1:13,14:26:2.34:130,2,0	0/0:19,0:19:12.04:0,12,458	0/0:13,0:14:21.07:0,21,692	0/0:18,0:19:29.41:0,29,544	1/1:10,0:11:3.01:31,3,0
chr10	5547536	.	GT	G	2318.52	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=4.997;DP=536;FS=13.184;HRun=9;HaplotypeScore=66.1691;InbreedingCoeff=0.9930;MQ=76.57;MQ0=1;MQRankSum=-1.326;QD=22.51;ReadPosRankSum=2.935;VQSLOD=3.6144;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:66.18:0,66,750	0/0:10,0:10:27.07:0,27,302	0/0:22,0:20:44.76:0,45,451	0/0:14,0:12:13.11:0,13,183	0/0:33,0:33:93.25:0,93,1053	0/0:20,0:20:60.17:0,60,684	0/0:15,0:15:39.06:0,39,425	0/0:20,0:20:48.13:0,48,545	0/0:11,0:11:24:0,24,260	0/0:35,0:35:93.27:0,93,1066	0/0:22,0:22:60.18:0,60,689	0/0:9,0:9:24.07:0,24,273	0/0:17,0:17:51.13:0,51,577	0/0:16,0:17:38.95:0,39,429	1/1:2,20:22:51.03:467,51,0	0/0:3,0:17:31.25:0,31,159	0/0:26,0:26:72.20:0,72,821	0/0:15,0:15:42.01:0,42,443	0/0:1,0:20:56.85:0,57,289	0/0:1,0:25:68.31:0,68,353	0/0:16,0:16:48.09:0,48,514	0/0:2,0:16:39.89:0,40,207	0/0:18,0:18:51.15:0,51,589	0/0:13,0:13:39.12:0,39,450	1/1:1,22:23:63.03:576,63,0	1/1:0,16:16:48.01:435,48,0	1/1:1,26:27:72.04:659,72,0	1/1:0,15:15:39.02:357,39,0
chr10	5549543	.	GGT	G	595.26	PASS	AB=0.861;AC=14;AF=0.259;AN=54;BaseQRankSum=2.780;DP=608;FS=2.017;HRun=0;HaplotypeScore=111.3115;InbreedingCoeff=-0.2021;MQ=60.35;MQ0=11;MQRankSum=-0.182;QD=1.89;ReadPosRankSum=0.514;VQSLOD=2.2580;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:0:0,0,0	0/1:8,2:11:60.36:60,0,131	./.	0/0:19,0:13:3.01:0,3,42	0/1:21,4:25:29.67:30,0,366	0/1:14,5:19:40.87:41,0,251	0/1:31,2:34:99:120,0,627	0/0:36,0:35:3.24:0,3,223	0/1:18,2:20:3.56:4,0,356	0/0:26,3:30:6.84:0,7,603	0/1:6,3:9:18.60:19,0,165	0/1:23,1:23:45.34:45,0,475	0/0:20,0:20:35.80:0,36,500	0/1:22,2:24:0.65:1,0,324	0/0:12,0:14:5.67:0,6,36	0/0:10,0:9:8.99:0,9,75	1/1:16,0:29:8.51:41,9,0	0/1:20,4:25:99:137,0,365	0/0:13,0:11:2.22:0,2,8	0/0:18,0:18:9.87:0,10,105	0/1:36,6:39:62.16:62,0,727	0/0:11,0:12:8.68:0,9,78	0/1:13,3:16:65.78:66,0,289	0/1:30,6:36:99:111,0,560	0/0:20,0:24:2.59:0,3,12	0/0:23,0:22:18.96:0,19,285	0/0:23,0:23:23.94:0,24,219	0/0:13,0:13:24.01:0,24,239
chr10	5549573	.	T	TGC	445.45	PASS	AB=1.000;AC=9;AF=0.167;AN=54;BaseQRankSum=7.163;DP=601;FS=0.000;HRun=0;HaplotypeScore=115.0912;InbreedingCoeff=0.4233;MQ=51.13;MQ0=23;MQRankSum=-0.318;QD=5.24;ReadPosRankSum=-0.660;VQSLOD=2.9228;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	0/0:8,0:8:23.92:0,24,227	0/0:16,0:3:5.94:0,6,41	0/0:23,0:3:2.99:0,3,23	0/0:23,0:23:62.95:0,63,707	0/0:21,0:21:42.01:0,42,455	0/0:40,0:40:99:0,111,1212	0/0:32,0:30:81.63:0,82,839	0/0:21,0:21:39.05:0,39,481	0/0:40,0:40:99:0,106,1177	0/0:16,0:16:41.96:0,42,424	0/0:29,0:28:77.61:0,78,834	0/0:17,0:17:41.96:0,42,560	0/0:20,0:19:33.08:0,33,449	0/1:12,0:12:16.02:30,0,16	0/1:10,0:9:11.99:12,0,19	0/0:23,0:22:17.32:0,17,89	0/0:24,0:24:65.89:0,66,714	1/1:7,0:5:1.57:64,2,0	1/1:9,7:16:11.11:436,11,0	0/0:46,0:42:98.28:0,98,1143	1/1:18,0:18:5.25:24,5,0	0/0:20,0:20:59.96:0,60,637	0/0:30,0:30:78.02:0,78,901	0/1:22,0:22:13.36:13,0,37	0/0:25,0:23:61.57:0,62,492	0/0:15,0:15:7.57:0,8,148	0/0:13,0:13:15.33:0,15,143
chr10	5549577	.	T	TGCGC	2255.31	PASS	AB=0.797;AC=18;AF=0.321;AN=56;BaseQRankSum=-1.290;DP=611;FS=14.868;HRun=0;HaplotypeScore=132.5989;InbreedingCoeff=0.8109;MQ=52.27;MQ0=21;MQRankSum=1.431;QD=13.35;ReadPosRankSum=1.879;VQSLOD=2.2330;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:6,1:19:0:0,0,0	0/0:12,0:12:27.05:0,27,369	0/0:15,0:4:6.16:0,6,53	0/1:22,0:2:0:0,0,0	0/0:22,0:23:60.16:0,60,901	0/0:21,0:21:36.37:0,36,592	0/0:39,0:39:99:0,108,1691	0/0:31,0:29:60.05:0,60,880	0/0:20,0:20:42.11:0,42,651	0/0:37,0:37:95.87:0,96,1483	0/0:17,0:17:41.96:0,42,642	0/0:29,0:28:72.13:0,72,1089	0/0:17,0:17:36.12:0,36,617	0/0:20,0:19:24.06:0,24,366	1/1:12,0:13:6.02:92,6,0	1/1:11,0:10:3.01:36,3,0	0/0:23,0:22:23.36:0,23,256	0/0:25,0:25:66.15:0,66,940	1/1:6,0:6:7.20:79,7,0	1/1:19,0:19:28.36:394,28,0	0/0:47,0:44:77.45:0,77,1453	0/0:6,1:20:0.94:0,1,2	0/0:18,0:18:45.25:0,45,756	0/0:28,0:28:72.08:0,72,1130	1/1:18,0:20:2.63:51,3,0	1/1:10,16:25:44.92:889,45,0	1/1:5,11:17:14.19:370,14,0	1/1:1,12:14:21.07:524,21,0
chr10	5549580	.	G	GCGCGCGCA	797.24	PASS	AB=1.000;AC=12;AF=0.214;AN=56;BaseQRankSum=6.952;DP=607;FS=9.516;HRun=0;HaplotypeScore=176.5494;InbreedingCoeff=0.2890;MQ=53.57;MQ0=20;MQRankSum=-0.033;QD=4.80;ReadPosRankSum=2.066;VQSLOD=1.8028;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:19,0:19:0:0,0,0	0/0:12,0:12:33.03:0,33,696	0/0:15,0:4:6.49:0,6,117	0/1:23,0:3:0.02:0,0,0	0/0:24,0:24:63.17:0,63,1595	0/0:21,0:21:36.24:0,36,998	0/0:41,0:41:99:0,117,2838	0/0:28,0:26:57.61:0,58,1388	0/0:19,0:19:42.11:0,42,1053	0/0:35,0:35:96.14:0,96,2426	0/0:17,0:17:45.12:0,45,1106	0/0:28,0:28:75.15:0,75,1831	0/0:16,0:16:39.95:0,40,1012	0/0:19,0:18:30.01:0,30,639	1/1:11,0:11:6.02:225,6,0	0/1:9,0:8:10.98:77,0,11	0/0:23,0:22:23.32:0,23,417	0/0:27,0:27:66.19:0,66,1558	0/1:7,0:7:20.69:27,0,21	0/1:19,0:19:30.63:31,0,131	0/0:48,0:45:99:0,114,2641	0/0:20,0:20:0.23:0,0,1	0/0:19,0:19:51.04:0,51,1324	0/0:29,0:29:72.20:0,72,1899	1/1:7,10:21:3.78:226,4,0	0/1:26,0:24:99:139,0,118	0/1:14,0:14:1.09:110,0,1	0/1:17,0:17:23.82:101,0,24
chr10	5550632	.	TGA	T	1696.94	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.464;DP=805;FS=0.000;HRun=0;HaplotypeScore=94.2901;InbreedingCoeff=0.9979;MQ=70.69;MQ0=0;MQRankSum=-3.659;QD=40.40;ReadPosRankSum=1.424;VQSLOD=5.2292;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,41:42:99:1792,117,0	0/0:17,0:17:48.15:0,48,893	0/0:14,0:14:42.14:0,42,788	0/0:22,0:20:51.17:0,51,945	0/0:17,0:17:48.16:0,48,917	0/0:25,0:25:72.25:0,72,1389	0/0:34,0:34:99:0,102,1968	0/0:28,0:28:78.27:0,78,1504	0/0:27,0:27:81.28:0,81,1563	0/0:46,0:46:99:0,138,2655	0/0:22,0:22:63.22:0,63,1211	0/0:37,0:37:99:0,111,2127	0/0:30,0:30:90.31:0,90,1733	0/0:35,0:35:99:0,105,2027	0/0:31,0:31:93.30:0,93,1762	0/0:27,0:27:81.28:0,81,1552	0/0:42,0:42:99:0,126,2433	0/0:25,0:24:75.26:0,75,1449	0/0:18,0:18:51.16:0,51,953	0/0:24,0:24:72.25:0,72,1389	0/0:63,0:63:99:0,190,3597	0/0:28,0:28:84.29:0,84,1601	0/0:19,0:19:54.18:0,54,1029	0/0:46,0:46:99:0,129,2480	0/0:23,0:23:66.23:0,66,1242	0/0:32,0:32:96.31:0,96,1792	0/0:23,0:23:69.24:0,69,1326	0/0:8,0:8:24.08:0,24,464
chr10	5550918	.	GC	G	1904.08	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.453;DP=750;FS=2.466;HRun=2;HaplotypeScore=72.0592;InbreedingCoeff=0.9998;MQ=88.82;MQ0=0;MQRankSum=-1.511;QD=34.00;ReadPosRankSum=3.392;VQSLOD=4.1458;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,129,1905	0/0:15,0:15:42.11:0,42,586	0/0:36,0:36:99:0,105,1450	0/0:19,0:19:45.13:0,45,634	0/0:15,0:15:45.15:0,45,675	0/0:17,0:17:51.17:0,51,763	0/0:30,0:30:90.30:0,90,1349	0/0:26,0:26:72.24:0,72,1079	0/0:37,0:37:99:0,111,1645	0/0:30,0:30:90.30:0,90,1331	0/0:20,0:20:57.19:0,57,854	0/0:32,0:32:93.31:0,93,1370	0/0:21,0:21:63.21:0,63,944	0/0:33,0:33:99:0,99,1466	1/1:0,32:32:90.29:1169,90,0	0/0:32,0:32:96.32:0,96,1418	0/0:42,0:42:99:0,126,1850	0/0:13,0:13:39.13:0,39,583	0/0:21,0:21:60.20:0,60,894	0/0:13,0:13:36.12:0,36,540	0/0:40,0:40:99:0,120,1757	0/0:30,0:30:90.30:0,90,1343	0/0:14,0:14:42.13:0,42,606	0/0:43,0:43:99:0,129,1915	1/1:0,24:24:66.21:857,66,0	0/0:34,0:34:99:0,99,1464	0/0:24,0:24:72.23:0,72,1059	0/0:12,0:12:36.10:0,36,518
chr10	5551432	.	T	TGA	11582.03	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-12.431;DP=634;FS=3.116;HRun=0;HaplotypeScore=77.2960;InbreedingCoeff=0.9993;MQ=89.17;MQ0=0;MQRankSum=-3.365;QD=52.89;ReadPosRankSum=2.329;VQSLOD=5.7790;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,41:41:99:2144,111,0	0/0:13,0:13:39.13:0,39,593	0/0:28,0:28:74.74:0,75,1077	0/0:24,0:25:66.01:0,66,885	0/0:14,0:14:42.14:0,42,641	0/0:13,0:13:39.12:0,39,577	0/0:24,0:24:69.21:0,69,1015	0/0:36,0:36:99:0,99,1452	0/0:23,0:23:69.21:0,69,1013	0/0:25,0:25:69.23:0,69,1057	0/0:7,0:7:21.07:0,21,321	0/0:14,0:14:42.14:0,42,643	0/0:20,0:20:60.18:0,60,896	0/0:21,0:21:57.19:0,57,872	1/1:2,19:22:51.17:985,51,0	1/1:0,20:20:57.18:1101,57,0	0/0:31,0:31:93.32:0,93,1424	0/0:19,0:19:57.18:0,57,852	1/1:3,13:16:44.91:765,45,0	1/1:0,24:24:69.24:1330,69,0	0/0:39,0:39:99:0,108,1653	1/1:0,20:20:54.19:1043,54,0	0/0:18,0:18:51.17:0,51,780	0/0:45,0:45:99:0,132,2000	1/1:1,19:20:54.19:1043,54,0	1/1:0,24:24:72.25:1377,72,0	1/1:2,20:22:63.22:1215,63,0	1/1:0,10:10:30.10:580,30,0
chr10	5551906	.	CT	C	8847.57	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=14.032;DP=778;FS=7.693;HRun=1;HaplotypeScore=81.9797;InbreedingCoeff=0.9995;MQ=82.89;MQ0=0;MQRankSum=-4.429;QD=38.64;ReadPosRankSum=4.364;VQSLOD=5.2808;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,43:43:99:1634,117,0	0/0:13,0:13:36.12:0,36,575	0/0:22,0:22:65.66:0,66,934	0/0:21,0:21:60.16:0,60,908	0/0:38,0:38:99:0,114,1795	0/0:25,0:25:75.26:0,75,1198	0/0:32,0:32:96.31:0,96,1510	0/0:26,0:26:75.26:0,75,1200	0/0:29,0:29:87.27:0,87,1341	0/0:39,0:39:99:0,117,1812	0/0:20,0:20:60.20:0,60,958	0/0:29,0:29:87.29:0,87,1365	0/0:25,0:25:75.24:0,75,1174	0/0:27,0:27:81.26:0,81,1270	0/0:41,0:41:99:0,123,1943	1/1:0,49:49:99:1926,138,0	0/0:23,0:23:69.23:0,69,1092	0/0:20,0:20:60.16:0,60,931	1/1:0,9:9:27.09:377,27,0	1/1:0,34:34:87.29:1211,87,0	0/0:50,0:50:99:0,151,2390	1/1:2,29:31:90.29:1240,90,0	0/0:19,0:19:54.17:0,54,840	0/0:20,0:20:60.20:0,60,956	0/0:30,0:30:90.30:0,90,1415	1/1:1,29:30:42.32:1164,42,0	1/1:0,25:25:69.23:961,69,0	1/1:0,8:8:24.08:334,24,0
chr10	5553881	.	ATC	A	6214.82	PASS	AB=0.526;AC=15;AF=0.268;AN=56;BaseQRankSum=15.075;DP=575;FS=4.938;HRun=0;HaplotypeScore=76.9969;InbreedingCoeff=0.9508;MQ=82.22;MQ0=2;MQRankSum=-3.148;QD=38.36;ReadPosRankSum=2.780;VQSLOD=7.1799;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,14:13:33.11:503,33,0	0/0:14,0:14:42.12:0,42,775	0/0:17,0:17:51.14:0,51,847	0/0:15,0:15:33.11:0,33,582	0/0:32,0:32:89.49:0,89,1609	0/0:27,0:27:78.27:0,78,1487	0/0:13,0:13:39.13:0,39,751	0/0:40,0:40:99:0,114,2092	0/0:21,0:21:60.19:0,60,1122	0/0:31,0:31:90.28:0,90,1617	0/0:28,0:28:81.26:0,81,1530	0/0:14,0:14:42.10:0,42,764	0/0:17,0:17:51.14:0,51,917	0/0:16,0:16:45.15:0,45,868	0/0:13,0:13:30.10:0,30,579	1/1:1,18:19:48.16:734,48,0	0/0:12,0:12:30.10:0,30,579	0/0:17,0:17:45.01:0,45,719	1/1:0,14:14:42.10:595,42,0	1/1:1,23:24:60.20:909,60,0	0/0:28,0:28:84.25:0,84,1552	1/1:0,18:18:48.16:734,48,0	0/0:20,0:20:60.21:0,60,1158	0/0:20,0:20:48.15:0,48,894	0/0:18,0:18:54.17:0,54,1010	0/1:2,18:20:0.82:703,0,1	1/1:2,34:35:93.23:1393,93,0	1/1:0,17:17:42.14:642,42,0
chr10	5553966	.	A	ATTTC	5221.90	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=12.471;DP=624;FS=1.544;HRun=0;HaplotypeScore=139.0506;InbreedingCoeff=0.6340;MQ=67.61;MQ0=3;MQRankSum=-5.404;QD=19.06;ReadPosRankSum=-0.765;VQSLOD=4.7181;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:21:48.02:411,48,0	0/0:11,0:11:30.05:0,30,417	0/0:22,0:17:32.20:0,32,339	0/0:8,0:7:14.95:0,15,122	0/1:22,0:22:80.36:80,0,309	0/0:31,0:31:65.96:0,66,600	0/0:11,0:11:20.74:0,21,177	0/0:42,0:42:99:0,108,949	0/0:27,0:27:63.02:0,63,674	0/0:31,0:31:81.15:0,81,1095	0/0:17,0:17:39.03:0,39,510	0/0:24,0:24:69.08:0,69,915	0/0:22,0:22:63.12:0,63,907	0/1:15,0:15:11.86:12,0,379	1/1:2,26:28:24.08:616,24,0	1/1:28,0:28:76.60:768,77,0	0/0:27,0:27:43.18:0,43,449	0/0:24,0:25:53.67:0,54,469	1/1:12,1:13:14.46:329,14,0	1/1:20,0:20:53.92:562,54,0	0/1:26,0:26:99:118,0,353	1/1:12,0:12:29.94:313,30,0	0/0:23,0:23:58.25:0,58,630	0/0:29,0:29:51.42:0,51,558	0/1:17,0:17:99:117,0,148	0/1:23,0:23:5.93:617,0,6	1/1:30,0:30:79.97:895,80,0	1/1:18,0:18:41.98:383,42,0
chr10	5553972	.	TTCTA	T	1405.92	PASS	AB=1.000;AC=11;AF=0.220;AN=50;BaseQRankSum=-0.938;DP=630;FS=11.250;HRun=0;HaplotypeScore=151.1425;InbreedingCoeff=0.7853;MQ=66.73;MQ0=3;MQRankSum=1.552;QD=10.41;ReadPosRankSum=-0.479;VQSLOD=2.5979;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:17.51:0,18,167	0/0:10,0:10:18.06:0,18,421	./.	./.	0/0:17,0:24:24.91:0,25,321	1/1:18,10:28:15.05:231,15,0	1/1:9,2:11:8.69:116,9,0	./.	1/1:9,15:24:39.13:601,39,0	0/0:35,0:35:13.96:0,14,1174	0/0:18,0:18:30.10:0,30,666	0/0:24,1:25:4.92:0,5,970	0/0:21,0:21:45.14:0,45,990	0/0:11,0:12:21.07:0,21,465	0/0:29,0:29:30.07:0,30,486	0/0:29,0:29:32.97:0,33,416	1/1:10,18:28:21.07:323,21,0	1/1:14,10:24:11.53:268,12,0	0/0:14,0:14:8.99:0,9,124	0/0:20,0:20:10.57:0,11,136	0/0:17,0:28:15.01:0,15,203	0/0:12,0:11:9:0,9,101	0/0:23,0:23:21.06:0,21,438	0/0:28,0:28:29.94:0,30,549	0/1:20,0:20:31.70:32,0,543	0/0:22,0:22:33.06:0,33,443	0/0:28,0:28:41.99:0,42,526	0/0:23,0:23:45.07:0,45,641
chr10	5553975	.	T	TTTCTATCC	9674.91	PASS	AB=0.940;AC=16;AF=0.286;AN=56;BaseQRankSum=7.613;DP=619;FS=0.000;HRun=0;HaplotypeScore=174.8896;InbreedingCoeff=0.7981;MQ=65.18;MQ0=3;MQRankSum=-5.211;QD=48.37;ReadPosRankSum=-0.927;VQSLOD=4.3969;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:26,1:27:8.24:771,8,0	0/0:11,0:11:33.09:0,33,745	0/0:20,0:15:35.21:0,35,580	0/0:7,0:6:14.86:0,15,170	0/0:24,0:24:13.15:0,13,705	0/0:27,0:27:66.19:0,66,1123	0/0:11,0:11:14.03:0,14,379	0/0:36,0:36:99:0,108,1713	0/0:24,0:24:63.19:0,63,1199	0/0:33,0:33:99:0,99,2210	0/0:16,0:16:48.12:0,48,997	0/0:26,0:26:78.24:0,78,1765	0/0:22,0:22:66.19:0,66,1563	0/0:11,0:11:32.31:0,32,710	0/1:27,0:27:66.28:129,0,66	1/1:27,2:29:84.20:1835,84,0	0/0:29,0:29:43.36:0,43,814	0/0:25,0:25:52.70:0,53,813	1/1:16,0:16:36.54:637,37,0	1/1:16,2:18:54.08:1035,54,0	0/0:28,0:28:57.49:0,57,808	1/1:11,1:11:29.97:538,30,0	0/0:22,0:22:61.47:0,61,1231	0/0:27,0:27:57.58:0,58,1129	0/0:20,0:20:11.74:0,12,684	0/1:19,3:22:79.67:1579,0,80	1/1:21,7:28:84.14:2002,84,0	1/1:20,0:21:57.18:1149,57,0
chr10	5554568	.	TA	T	7162.26	PASS	AB=0.925;AC=40;AF=0.714;AN=56;BaseQRankSum=5.892;DP=559;FS=8.394;HRun=11;HaplotypeScore=65.0621;InbreedingCoeff=0.8584;MQ=72.28;MQ0=0;MQRankSum=0.545;QD=17.64;ReadPosRankSum=1.765;VQSLOD=5.8629;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,1:26:44.45:0,44,643	1/1:1,7:8:17.98:148,18,0	0/1:13,1:14:4.13:4,0,152	0/1:13,0:13:1.31:1,0,97	1/1:2,27:29:65.85:542,66,0	1/1:3,18:21:47.94:394,48,0	1/1:3,22:25:59.93:493,60,0	1/1:8,25:33:71.89:591,72,0	1/1:4,21:25:56.93:468,57,0	1/1:1,23:24:65.88:537,66,0	1/1:4,19:25:54.98:430,55,0	1/1:1,22:23:56.93:468,57,0	1/1:2,13:15:32.96:271,33,0	1/1:3,13:17:37.99:301,38,0	0/0:8,0:23:20.05:0,20,160	0/0:20,0:20:54.13:0,54,569	1/1:4,12:16:32.96:271,33,0	1/1:3,17:22:55:429,55,0	0/0:17,1:18:20.47:0,20,423	0/0:27,0:27:78.15:0,78,803	1/1:1,15:16:35.96:296,36,0	0/0:14,0:14:42.11:0,42,448	1/1:2,13:15:35.96:296,36,0	1/1:0,13:13:38.96:320,39,0	0/0:2,0:25:28.57:0,29,202	1/1:6,21:27:62.89:515,63,0	1/1:2,18:20:18.96:362,19,0	1/1:0,1:1:3:25,3,0
chr10	5555392	.	G	GA	256.22	PASS	AB=0.929;AC=16;AF=0.571;AN=28;BaseQRankSum=3.027;DP=74;FS=0.000;HRun=1;HaplotypeScore=97.1044;InbreedingCoeff=0.2331;MQ=23.52;MQ0=25;MQRankSum=-1.249;QD=7.12;ReadPosRankSum=0.487;VQSLOD=0.5243;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:5,1:6:1.38:0,1,5	./.	./.	./.	0/0:2,0:1:0:0,0,0	1/1:1,0:1:2.60:10,3,0	./.	0/0:2,0:2:3.28:0,3,9	1/1:1,0:1:2.04:6,2,0	0/1:2,0:2:7.92:16,0,8	./.	./.	./.	./.	1/1:1,1:2:3.01:44,3,0	1/1:1,1:2:5.38:53,5,0	0/1:5,1:6:11.62:55,0,12	1/1:5,0:5:4.49:48,4,0	0/0:13,0:2:2.74:0,3,12	./.	1/1:6,2:6:5.39:24,5,0	0/0:4,0:4:4.72:0,5,17	./.	1/1:5,3:8:9.08:102,9,0	./.	./.	./.	./.
chr10	5555401	.	A	AG	205.56	PASS	AB=0.733;AC=16;AF=0.471;AN=34;BaseQRankSum=2.342;DP=102;FS=0.000;HRun=1;HaplotypeScore=105.1115;InbreedingCoeff=0.1803;MQ=23.91;MQ0=32;MQRankSum=-1.770;QD=3.16;ReadPosRankSum=0.539;VQSLOD=-0.2018;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,4:9:1.35:29,1,0	0/1:4,0:3:4.03:4,0,4	./.	./.	./.	1/1:1,0:1:2.60:10,3,0	0/0:6,0:3:3.38:0,3,11	0/0:8,0:5:10.24:0,10,33	1/1:3,0:2:2.04:6,2,0	0/1:1,1:2:25.24:33,0,25	./.	0/0:1,0:1:0:0,0,0	./.	./.	0/0:2,0:2:2.80:0,3,13	0/0:4,0:4:11.43:0,11,62	0/1:2,4:6:14.09:41,0,14	1/1:2,4:5:11.40:119,11,0	1/1:16,0:3:3.59:10,4,0	./.	1/1:8,2:7:4.04:11,4,0	0/0:6,0:6:2.51:0,3,7	./.	0/1:4,4:8:14.22:56,0,14	./.	0/0:1,0:1:2.22:0,2,7	./.	./.
chr10	5555404	.	G	GC	300.55	PASS	AB=0.788;AC=18;AF=0.529;AN=34;BaseQRankSum=3.618;DP=115;FS=13.183;HRun=0;HaplotypeScore=119.5563;InbreedingCoeff=0.2005;MQ=24.31;MQ0=33;MQRankSum=-0.813;QD=4.93;ReadPosRankSum=1.313;VQSLOD=2.3693;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:6,4:10:12.92:66,0,13	0/0:4,0:3:5.06:0,5,20	./.	./.	./.	1/1:2,0:2:2.60:10,3,0	0/1:8,0:5:13.06:26,0,13	0/0:8,0:6:12.54:0,13,49	1/1:3,0:2:1.49:5,1,0	0/1:3,1:4:32.68:33,0,34	./.	1/1:1,0:1:3:28,3,0	./.	./.	0/0:1,0:2:2.37:0,2,8	0/0:5,0:5:8.43:0,8,54	0/1:3,4:7:1.47:62,0,1	1/1:2,4:5:11.25:117,11,0	0/0:16,0:3:5.64:0,6,27	./.	1/1:9,2:8:1.86:6,2,0	0/0:8,0:8:5.16:0,5,34	./.	1/1:4,4:8:2.48:61,2,0	./.	1/1:1,0:1:1.25:3,1,0	./.	./.
chr10	5555405	.	A	AGT	162.47	PASS	AB=0.971;AC=19;AF=0.559;AN=34;BaseQRankSum=3.527;DP=118;FS=23.254;HRun=0;HaplotypeScore=121.4802;InbreedingCoeff=-0.1708;MQ=24.24;MQ0=33;MQRankSum=0.247;QD=1.61;ReadPosRankSum=1.533;VQSLOD=0.6564;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:10,0:10:6.04:6,0,45	0/0:4,0:3:0.56:0,1,11	./.	./.	./.	1/1:2,0:2:2.97:20,3,0	0/1:8,0:5:3.44:12,0,3	0/1:9,0:6:13.12:13,0,22	0/1:3,0:2:4.43:5,0,4	0/1:4,0:4:5.04:12,0,5	./.	0/0:1,0:1:0.47:0,0,1	./.	./.	1/1:2,0:2:2.60:10,3,0	0/1:5,0:5:9.89:10,0,24	0/1:8,0:7:6.95:44,0,7	1/1:6,0:5:4.73:36,5,0	0/1:15,1:3:8.32:26,0,8	./.	1/1:11,1:9:2.12:7,2,0	0/1:6,2:8:11.76:17,0,12	./.	1/1:8,0:8:8.94:50,9,0	./.	0/0:1,0:1:3:0,3,26	./.	./.
chr10	5555416	.	GAGA	G	1756.42	PASS	AB=0.878;AC=29;AF=0.659;AN=44;BaseQRankSum=0.572;DP=185;FS=0.000;HRun=0;HaplotypeScore=110.4916;InbreedingCoeff=0.1849;MQ=25.22;MQ0=38;MQRankSum=0.403;QD=10.21;ReadPosRankSum=1.783;VQSLOD=3.3132;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:14:26.74:288,27,0	0/1:3,3:5:3.34:89,0,3	./.	./.	0/1:3,2:4:0:0,0,0	0/1:8,0:6:4.54:18,0,5	1/1:12,2:10:20.30:121,20,0	1/1:9,6:10:22.99:284,23,0	0/0:4,0:2:3.41:0,3,19	1/1:3,2:4:8.20:124,8,0	1/1:3,1:4:1.97:48,2,0	1/1:4,0:4:5.95:28,6,0	./.	0/1:5,1:2:0:0,0,0	1/1:3,1:4:3.61:41,4,0	0/1:9,1:10:36.40:76,0,36	0/1:11,0:10:5.08:137,0,5	1/1:8,0:6:14.58:131,15,0	1/1:14,5:9:21.74:294,22,0	0/0:1,0:1:0.47:0,0,1	1/1:19,1:17:4.36:13,4,0	0/1:9,0:9:6.40:27,0,6	./.	1/1:8,0:8:12.62:151,13,0	0/0:2,0:2:0.83:0,1,2	0/0:2,0:2:1.86:0,2,17	./.	./.
chr10	5555419	.	AAG	A	627.19	PASS	AB=0.958;AC=24;AF=0.545;AN=44;BaseQRankSum=2.009;DP=203;FS=13.486;HRun=0;HaplotypeScore=115.5333;InbreedingCoeff=-0.1461;MQ=25.44;MQ0=39;MQRankSum=-0.779;QD=3.71;ReadPosRankSum=2.695;VQSLOD=1.8842;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:15,1:15:13.33:130,0,13	0/1:6,0:5:4.07:4,0,42	./.	./.	1/1:6,0:5:2.37:8,2,0	0/1:6,2:6:22.21:46,0,22	0/0:15,0:11:3.80:0,4,58	0/1:18,0:12:25.32:25,0,53	1/1:3,1:2:5.01:27,5,0	1/1:7,0:6:0.93:12,1,0	0/1:5,0:5:1.25:4,0,1	0/0:4,0:4:7.55:0,8,55	./.	0/0:6,0:2:2.74:0,3,12	1/1:3,1:4:3.95:49,4,0	0/1:10,1:11:26.79:27,0,94	0/1:10,1:10:36.78:87,0,37	0/1:9,0:7:19.55:29,0,20	0/1:17,0:10:21.25:21,0,28	0/0:2,0:2:2.98:0,3,21	1/1:16,3:17:1.04:125,1,0	0/1:13,0:12:12.68:13,0,17	./.	1/1:7,2:8:16.12:140,16,0	0/0:2,0:2:2.79:0,3,21	1/1:3,0:3:2.13:9,2,0	./.	./.
chr10	5555423	.	A	AGT	587.90	PASS	AB=0.967;AC=28;AF=0.583;AN=48;BaseQRankSum=5.481;DP=266;FS=9.822;HRun=0;HaplotypeScore=145.3547;InbreedingCoeff=-0.3194;MQ=25.75;MQ0=43;MQRankSum=1.641;QD=2.52;ReadPosRankSum=2.304;VQSLOD=2.2402;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:18,0:17:78.93:79,0,108	0/1:8,0:7:28.95:50,0,29	./.	./.	1/1:7,0:6:0.31:0,0,0	0/1:11,0:9:19.72:59,0,20	0/1:20,1:16:33.80:76,0,34	0/1:22,0:14:24.32:24,0,152	0/1:6,0:4:10.47:26,0,10	0/1:8,1:8:12.46:12,0,20	0/0:8,0:8:4.52:0,5,18	0/1:6,0:5:6.80:7,0,44	1/1:4,0:3:4.43:26,4,0	1/1:9,0:5:0.64:12,1,0	0/1:5,0:5:10.42:10,0,14	0/1:13,1:14:51.94:52,0,71	0/1:11,2:12:70.79:71,0,71	0/1:12,0:9:24.01:71,0,24	0/0:17,0:12:19.70:0,20,133	1/1:2,0:2:1.25:3,1,0	1/1:22,2:22:11.52:52,12,0	1/1:7,3:14:4.58:36,5,0	0/0:3,0:2:2.04:0,2,6	0/1:14,0:12:1.76:19,0,2	1/1:3,0:3:2.19:5,2,0	0/1:7,0:6:25.31:28,0,25	./.	./.
chr10	5555429	.	A	AGT	346.39	PASS	AB=0.962;AC=19;AF=0.380;AN=50;BaseQRankSum=4.628;DP=329;FS=9.982;HRun=0;HaplotypeScore=134.6531;InbreedingCoeff=-0.2974;MQ=26.78;MQ0=49;MQRankSum=0.662;QD=1.41;ReadPosRankSum=3.410;VQSLOD=1.4719;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:23:7.70:8,0,192	0/1:8,1:8:1.49:1,0,63	./.	./.	0/0:9,0:8:6.76:0,7,91	0/1:14,1:13:49.36:49,0,84	0/1:22,0:17:77.94:78,0,128	0/1:25,1:17:59.90:60,0,195	0/0:8,0:6:14.43:0,14,117	0/1:11,1:10:23.64:24,0,118	0/0:12,0:12:14.24:0,14,111	0/1:7,0:6:30.24:30,0,38	0/1:6,0:5:2.90:22,0,3	0/1:10,0:6:13.19:13,0,56	0/0:7,0:7:8.37:0,8,47	0/1:18,0:17:25.21:25,0,137	0/1:15,0:14:3.64:4,0,113	0/1:15,0:12:56.02:56,0,89	0/0:22,2:17:30.33:0,30,430	1/1:4,0:4:2.90:16,3,0	0/1:30,0:26:4.54:5,0,42	0/0:15,0:14:6.07:0,6,48	0/0:4,0:3:1.51:0,2,5	0/1:14,1:13:11.65:12,0,24	1/1:4,0:4:3.58:18,4,0	0/1:7,2:7:60.75:64,0,61	0/0:3,0:2:2.68:0,3,11	./.
chr10	5555435	.	AGAG	A	918.89	PASS	AB=0.978;AC=19;AF=0.380;AN=50;BaseQRankSum=4.759;DP=371;FS=7.371;HRun=0;HaplotypeScore=138.6545;InbreedingCoeff=-0.5102;MQ=28.98;MQ0=59;MQRankSum=-3.143;QD=3.20;ReadPosRankSum=5.917;VQSLOD=1.5612;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:25:62.12:62,0,259	0/1:9,0:9:39.68:40,0,106	./.	./.	0/0:9,0:8:7.26:0,7,94	0/1:16,1:15:98.12:98,0,131	0/1:25,1:20:99:170,0,227	0/1:28,1:19:31.01:31,0,197	0/1:10,0:7:76.32:84,0,76	0/1:13,1:10:47.44:47,0,79	0/0:13,0:13:16.36:0,16,217	0/1:6,1:6:58.08:58,0,123	0/1:7,0:6:16.77:17,0,55	0/0:10,0:6:7.59:0,8,98	0/0:7,0:7:6.36:0,6,47	0/1:20,0:18:29.95:30,0,277	0/1:16,1:15:32.11:32,0,142	0/1:17,0:14:43.56:44,0,223	0/1:26,0:18:99:104,0,367	0/0:5,0:5:6.36:0,6,61	0/0:33,0:28:25.11:0,25,241	0/1:19,0:16:58:112,0,58	0/1:6,0:4:5.56:6,0,41	0/1:14,0:13:56.93:70,0,57	0/0:6,0:6:11.83:0,12,145	0/1:13,0:9:24.13:24,0,213	1/1:3,0:2:3.01:37,3,0	./.
chr10	5555438	.	G	GGA	351.71	PASS	AB=0.982;AC=20;AF=0.400;AN=50;BaseQRankSum=5.640;DP=397;FS=21.648;HRun=0;HaplotypeScore=141.6484;InbreedingCoeff=-0.5182;MQ=29.36;MQ0=69;MQRankSum=-2.209;QD=1.14;ReadPosRankSum=4.240;VQSLOD=1.1014;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:31,0:24:40.83:41,0,212	0/1:10,1:10:20.29:20,0,151	./.	./.	0/0:8,0:7:7.33:0,7,96	0/1:16,1:15:36.81:37,0,90	0/1:29,0:20:75.82:76,0,214	0/1:33,0:19:5.03:5,0,213	0/1:11,1:8:28.09:28,0,146	0/1:15,0:10:4.34:4,0,187	0/0:13,0:13:8.09:0,8,184	0/1:8,0:6:19.82:20,0,68	0/0:8,0:7:11.85:0,12,145	0/1:10,0:6:21.72:22,0,107	0/1:7,0:6:12.02:12,0,54	0/1:20,1:18:39.49:39,0,244	0/1:18,0:15:38.91:39,0,72	0/1:17,0:14:11.92:12,0,216	0/1:26,0:18:34.40:34,0,363	0/0:9,0:6:2.66:0,3,44	0/0:35,0:29:14.62:0,15,196	0/1:19,0:16:33.54:52,0,34	0/1:9,0:6:10.71:11,0,98	0/0:16,0:13:9.41:0,9,35	0/1:9,0:8:1.47:1,0,183	0/1:12,1:9:16.85:17,0,217	1/1:3,0:2:2.98:22,3,0	./.
chr10	5555944	.	CT	C	2849.49	PASS	AB=0.654;AC=36;AF=0.643;AN=56;BaseQRankSum=1.693;DP=551;FS=4.151;HRun=14;HaplotypeScore=67.6460;InbreedingCoeff=0.8181;MQ=75.76;MQ0=0;MQRankSum=-0.024;QD=8.28;ReadPosRankSum=3.001;VQSLOD=3.0559;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,34:49:65.01:548,65,0	1/1:0,6:6:17.84:123,18,0	0/0:16,0:14:8.91:0,9,85	0/0:13,0:11:5.94:0,6,41	1/1:5,11:16:20.50:140,20,0	1/1:2,14:18:6.79:183,7,0	1/1:5,12:19:36.78:238,37,0	0/0:29,0:30:21.85:0,22,333	1/1:6,18:25:24.76:307,25,0	1/1:7,10:17:20.71:144,21,0	0/1:10,11:21:4.13:120,0,4	1/1:4,8:13:19.84:129,20,0	1/1:4,7:11:14.84:103,15,0	1/1:3,8:12:19.88:129,20,0	0/0:6,0:25:25.57:0,26,129	1/1:3,0:14:22.38:65,22,0	0/0:4,0:28:23.97:0,24,118	1/1:2,10:12:20.83:144,21,0	1/1:11,0:19:16.23:47,16,0	1/1:6,0:29:42.75:124,43,0	0/1:7,8:15:10.08:85,0,10	1/1:6,1:16:17.20:62,17,0	1/1:4,9:14:23.72:164,24,0	1/1:8,10:18:29.65:205,30,0	0/0:5,0:20:27.98:0,28,139	0/0:22,1:24:15.19:0,15,258	0/0:30,2:32:39.36:0,39,478	0/0:15,0:17:41.84:0,42,362
chr10	5556177	.	AACACACACAC	A	1586.37	PASS	AC=4;AF=0.077;AN=52;BaseQRankSum=1.654;DP=505;FS=24.674;HRun=0;HaplotypeScore=154.1475;InbreedingCoeff=0.6901;MQ=60.07;MQ0=2;MQRankSum=-4.504;QD=36.89;ReadPosRankSum=2.156;VQSLOD=1.8075;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:34:16.48:0,16,539	0/0:9,0:9:6.49:0,6,245	0/0:25,0:18:12.04:0,12,196	0/0:25,0:20:12.04:0,12,322	0/0:17,0:17:18.02:0,18,718	0/0:19,0:17:9.03:0,9,363	0/0:28,0:28:14.76:0,15,569	0/0:23,0:23:24.08:0,24,859	./.	0/0:13,0:13:30.10:0,30,927	0/0:8,0:8:6.02:0,6,261	0/0:20,0:20:5.99:0,6,235	0/0:10,0:10:9.03:0,9,295	0/0:18,0:16:17.63:0,18,693	1/1:9,12:21:36.12:1076,36,0	0/0:14,0:14:9.03:0,9,362	0/0:25,0:25:19.62:0,20,665	0/0:15,0:15:22.86:0,23,669	0/0:18,0:18:27.37:0,27,857	./.	0/0:20,0:19:9.01:0,9,277	0/0:17,0:17:15.05:0,15,466	0/0:11,0:11:9.03:0,9,379	0/0:18,0:17:8.91:0,9,194	1/1:12,9:22:27.09:630,27,0	0/0:18,0:18:30.06:0,30,1099	0/0:19,0:19:36.51:0,37,1218	0/0:13,0:13:18.05:0,18,703
chr10	5556217	.	CACGGA	C	1800.97	PASS	AB=1.000;AC=31;AF=0.574;AN=54;BaseQRankSum=5.381;DP=555;FS=12.837;HRun=0;HaplotypeScore=122.1504;InbreedingCoeff=0.5944;MQ=52.31;MQ0=48;MQRankSum=-4.525;QD=5.51;ReadPosRankSum=0.823;VQSLOD=1.1140;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:39,0:34:21.35:299,21,0	1/1:10,0:10:2.96:55,3,0	0/0:22,0:16:48.16:0,48,1179	0/0:22,0:13:36.12:0,36,828	1/1:11,6:15:5.60:77,6,0	1/1:24,0:20:5.70:29,6,0	1/1:29,0:25:9.03:166,9,0	0/0:26,0:26:54.14:0,54,1234	1/1:17,0:14:3.01:55,3,0	1/1:14,0:13:17.23:226,17,0	0/1:10,0:8:9.91:48,0,10	1/1:25,0:19:0.45:1,0,0	1/1:11,0:11:8.68:124,9,0	0/0:22,0:17:5.84:0,6,20	0/0:26,0:26:68.91:0,69,997	1/1:18,0:15:15.93:207,16,0	0/0:28,0:27:51.60:0,52,1210	1/1:21,0:18:9.51:197,10,0	1/1:19,0:16:30.02:461,30,0	./.	0/1:26,0:23:4.46:5,0,4	0/0:13,0:11:2.60:0,3,10	1/1:8,0:6:3.70:11,4,0	1/1:21,0:18:2.29:6,2,0	0/0:15,0:15:18.19:0,18,361	0/1:18,0:17:19.70:20,0,736	0/0:28,0:27:53.50:0,54,1255	0/0:14,0:14:27.09:0,27,670
chr10	5556219	.	CGGA	C	2986.39	PASS	AB=0.964;AC=38;AF=0.704;AN=54;BaseQRankSum=6.684;DP=472;FS=35.171;HRun=0;HaplotypeScore=89.5704;InbreedingCoeff=0.6690;MQ=56.92;MQ0=46;MQRankSum=-2.728;QD=9.13;ReadPosRankSum=-0.601;VQSLOD=0.7688;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,17:20:27:374,27,0	1/1:1,8:9:5.75:81,6,0	0/0:23,0:17:51.18:0,51,1246	0/0:20,0:13:36.12:0,36,818	1/1:13,1:13:18:189,18,0	1/1:4,14:18:9.02:109,9,0	1/1:9,14:20:17.70:243,18,0	0/0:22,0:22:57.15:0,57,1311	1/1:3,13:14:3.01:55,3,0	1/1:2,9:11:21.06:327,21,0	1/1:5,3:6:8.74:90,9,0	1/1:6,16:18:2.66:27,3,0	1/1:1,8:10:12.03:177,12,0	1/1:11,9:16:14.40:124,14,0	0/0:25,0:25:75.11:0,75,1241	1/1:6,9:12:21.06:323,21,0	0/1:24,0:24:5.42:5,0,1180	1/1:4,12:15:21.34:295,21,0	1/1:2,13:12:36.06:546,36,0	./.	1/1:7,14:20:5.91:52,6,0	1/1:1,7:6:2.92:17,3,0	1/1:5,2:5:9.01:91,9,0	1/1:3,13:16:3.01:32,3,0	0/0:15,0:15:27.91:0,28,433	0/1:12,0:12:19.70:20,0,700	0/0:22,0:21:51.46:0,51,1165	0/0:10,0:10:30.10:0,30,690
chr10	5556222	.	A	AC	1967.45	PASS	AB=0.964;AC=38;AF=0.704;AN=54;BaseQRankSum=7.744;DP=466;FS=31.426;HRun=0;HaplotypeScore=86.9750;InbreedingCoeff=0.6408;MQ=63.19;MQ0=45;MQRankSum=-2.428;QD=6.21;ReadPosRankSum=-1.202;VQSLOD=1.3845;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,3:18:10.27:174,10,0	1/1:8,1:9:5.97:67,6,0	0/0:25,0:19:57.19:0,57,793	0/0:23,0:16:44.86:0,45,539	1/1:10,4:12:6.24:105,6,0	1/1:14,7:17:9.03:121,9,0	1/1:15,8:19:17.57:168,18,0	0/0:23,0:23:30.56:0,31,766	1/1:13,3:13:2.50:9,2,0	1/1:9,3:11:17.48:150,17,0	1/1:3,4:5:8.39:102,8,0	1/1:16,7:17:3.34:24,3,0	1/1:8,2:10:11.94:125,12,0	1/1:10,8:13:15.05:231,15,0	0/0:25,0:25:75.21:0,75,1021	1/1:9,6:12:20.84:201,21,0	0/1:24,0:24:1.50:1,0,672	1/1:12,5:14:0.86:117,1,0	1/1:14,2:13:34.34:219,34,0	./.	1/1:17,5:20:6.02:89,6,0	1/1:8,1:7:3.01:46,3,0	1/1:3,5:6:9.03:143,9,0	1/1:13,5:15:2.80:47,3,0	0/0:15,0:15:29.46:0,29,373	0/1:12,1:12:12.77:13,0,384	0/0:20,0:20:56.16:0,56,709	0/0:10,0:10:30.10:0,30,419
chr10	5558153	.	GA	G	1781.40	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=1.362;DP=472;FS=2.121;HRun=10;HaplotypeScore=59.8238;InbreedingCoeff=0.9000;MQ=55.93;MQ0=14;MQRankSum=-0.249;QD=16.65;ReadPosRankSum=1.628;VQSLOD=4.1460;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,31:32:65.98:573,66,0	0/0:6,0:6:12.03:0,12,133	0/0:5,0:2:6.02:0,6,66	0/0:3,0:3:6.02:0,6,65	0/0:24,0:26:63.64:0,64,634	0/0:14,0:16:38.94:0,39,412	0/0:17,2:19:25.06:0,25,495	0/0:31,0:30:81.22:0,81,891	0/0:9,0:9:20.89:0,21,213	0/0:19,0:19:45.11:0,45,489	0/0:11,0:11:33.07:0,33,356	0/0:9,1:9:18.58:0,19,228	0/0:9,0:9:18.05:0,18,199	0/0:15,0:14:33.04:0,33,345	0/0:18,0:18:39.11:0,39,431	1/1:5,9:12:20.99:182,21,0	0/0:36,0:35:64.52:0,65,855	0/0:24,0:21:54.15:0,54,596	1/1:4,15:18:41.01:344,41,0	1/1:2,15:17:41.98:363,42,0	0/0:15,2:17:7.03:0,7,306	1/1:0,22:22:56.97:493,57,0	0/0:21,0:20:51.14:0,51,564	0/0:17,0:17:39.11:0,39,431	0/0:20,0:18:48.13:0,48,531	0/0:14,0:15:35.93:0,36,378	0/0:14,0:13:36.03:0,36,372	0/0:3,0:3:6.02:0,6,66
chr10	5558988	.	CCAGTGAA	C	6920.72	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=12.004;DP=697;FS=1.342;HRun=0;HaplotypeScore=200.4365;InbreedingCoeff=0.9997;MQ=90.01;MQ0=0;MQRankSum=-14.041;QD=52.04;ReadPosRankSum=-1.505;VQSLOD=4.1251;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,38:40:63.15:1659,63,0	0/0:9,0:9:27.09:0,27,1044	0/0:20,0:20:60.19:0,60,2190	0/0:37,0:37:93.79:0,94,3644	0/0:32,0:32:93.25:0,93,3596	0/0:19,0:19:57.20:0,57,2244	0/0:24,0:24:66.23:0,66,2460	0/0:22,0:22:60.21:0,60,2247	0/0:27,0:27:81.26:0,81,3150	0/0:23,0:23:63.21:0,63,2330	0/0:19,0:19:57.20:0,57,2251	0/0:22,0:22:63.22:0,63,2397	0/0:21,0:21:63.22:0,63,2458	0/0:24,0:24:69.22:0,69,2617	0/0:22,0:22:66.23:0,66,2663	1/1:2,23:25:69.20:1759,69,0	0/0:26,0:26:78.27:0,78,3125	0/0:29,0:29:87.30:0,87,3491	1/1:2,19:21:54.19:1382,54,0	1/1:4,22:26:36.08:888,36,0	0/0:55,0:55:99:0,163,6440	1/1:3,17:20:48.16:1233,48,0	0/0:23,0:23:60.21:0,60,2254	0/0:33,0:33:99:0,99,3861	0/0:13,0:13:39.13:0,39,1543	0/0:32,0:32:96.32:0,96,3723	0/0:21,0:21:60.21:0,60,2390	0/0:11,0:11:33.11:0,33,1333
chr10	5559108	.	T	TA	4369.69	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-2.849;DP=694;FS=0.360;HRun=8;HaplotypeScore=86.9480;InbreedingCoeff=0.9927;MQ=73.04;MQ0=0;MQRankSum=-2.895;QD=26.32;ReadPosRankSum=-0.193;VQSLOD=4.9946;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,43:50:99:1367,120,0	0/0:15,0:15:45.02:0,45,412	0/0:16,0:15:32.56:0,33,300	0/0:20,0:20:47.98:0,48,423	0/0:21,0:21:60.03:0,60,549	0/0:24,0:24:60.01:0,60,543	0/0:17,0:17:38.98:0,39,347	0/0:23,0:23:63.01:0,63,569	0/0:32,0:32:84.02:0,84,764	0/0:40,0:40:99:0,108,980	0/0:21,0:21:51.01:0,51,466	0/0:30,0:30:69.03:0,69,631	0/0:22,0:22:60.03:0,60,549	0/0:26,0:26:63.01:0,63,572	0/0:16,0:16:39.01:0,39,357	1/1:2,31:33:87.26:1001,87,0	0/0:28,0:28:78.04:0,78,714	0/0:20,0:20:51.02:0,51,467	1/1:7,15:22:44.90:484,45,0	1/1:8,21:29:57.17:655,57,0	0/0:16,0:16:45.02:0,45,412	1/1:2,30:32:75.22:863,75,0	0/0:28,0:28:72.04:0,72,659	0/0:38,0:38:99:0,105,961	0/0:19,0:19:54.01:0,54,488	0/0:24,0:24:69.03:0,69,628	0/0:28,0:28:72.03:0,72,659	0/0:4,0:4:12.01:0,12,110
chr10	5559784	.	A	AT	3614.03	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-9.306;DP=579;FS=5.383;HRun=0;HaplotypeScore=113.1223;InbreedingCoeff=0.9988;MQ=74.42;MQ0=0;MQRankSum=0.692;QD=39.71;ReadPosRankSum=-0.460;VQSLOD=3.0253;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,111,1530	0/0:11,0:11:33.11:0,33,461	0/0:12,0:13:36.59:0,37,340	0/0:13,0:13:22.23:0,22,249	0/0:18,0:18:45.15:0,45,627	0/0:19,0:19:57.19:0,57,796	0/0:23,0:23:69.23:0,69,954	1/1:2,28:30:81.13:1087,81,0	0/0:24,0:24:66.22:0,66,923	0/0:20,0:20:60.20:0,60,839	0/0:14,0:14:36.12:0,36,492	0/0:19,0:19:57.19:0,57,791	0/0:21,0:21:63.21:0,63,880	0/0:19,0:19:57.19:0,57,790	0/0:18,0:18:49.80:0,50,319	0/0:17,0:17:51.16:0,51,693	0/0:27,0:27:57.44:0,57,450	0/0:16,0:16:48.16:0,48,669	0/0:17,0:17:51.17:0,51,711	0/0:23,0:23:63.21:0,63,875	0/0:38,0:38:99:0,111,1526	0/0:21,0:21:57.19:0,57,791	0/0:17,0:17:51.17:0,51,700	0/0:23,0:23:69.22:0,69,940	0/0:19,0:19:55.54:0,56,321	1/1:0,22:22:66.19:923,66,0	1/1:0,29:29:84.15:1178,84,0	1/1:0,10:10:30.10:426,30,0
chr10	5559857	.	ATGTGTGTGTGTGTG	A	4085.23	PASS	AB=0.813;AC=27;AF=0.587;AN=46;BaseQRankSum=6.256;DP=581;FS=37.593;HRun=0;HaplotypeScore=215.3284;InbreedingCoeff=0.2784;MQ=59.62;MQ0=22;MQRankSum=-5.509;QD=11.38;ReadPosRankSum=-0.820;VQSLOD=1.3037;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:28:22.83:0,23,563	./.	./.	./.	1/1:11,5:16:3.01:91,3,0	1/1:13,9:21:12.04:466,12,0	./.	0/0:20,0:19:7.56:0,8,89	0/1:8,8:16:13.22:308,0,13	1/1:25,7:31:17.28:602,17,0	1/1:10,0:12:7.82:81,8,0	1/1:13,1:15:2.80:116,3,0	1/1:11,5:16:9.03:330,9,0	1/1:10,4:14:6.02:233,6,0	1/1:11,5:17:15.05:545,15,0	0/1:13,0:20:6.95:171,0,7	0/0:31,0:31:47.65:0,48,2361	0/1:16,4:18:1.08:225,0,1	0/1:23,0:27:42.74:43,0,61	0/1:22,1:20:46.79:77,0,47	1/1:26,0:26:6:84,6,0	0/1:21,0:24:9.17:64,0,9	./.	0/1:19,11:30:13.90:103,0,14	1/1:17,7:25:16.30:548,16,0	0/0:15,0:15:12.01:0,12,256	0/0:19,0:19:27.07:0,27,698	0/0:7,0:7:6.02:0,6,102
chr10	5560098	.	CAGAG	C	1271.80	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=0.383;DP=789;FS=3.839;HRun=0;HaplotypeScore=272.2329;InbreedingCoeff=0.9106;MQ=44.87;MQ0=18;MQRankSum=0.551;QD=28.90;ReadPosRankSum=-1.547;VQSLOD=3.1303;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:37:52.42:0,52,288	0/0:9,0:9:18.05:0,18,273	0/0:26,0:9:12.91:0,13,191	0/0:55,0:16:5.86:0,6,236	0/0:28,0:28:48.57:0,49,1078	0/0:29,0:29:61.91:0,62,880	0/0:38,0:38:43.37:0,43,680	0/0:41,0:37:79.41:0,79,1748	0/0:29,0:29:70.07:0,70,976	0/0:45,0:45:99:0,117,2161	0/0:24,0:23:39.56:0,40,578	0/0:23,0:23:54.89:0,55,825	0/0:29,0:28:67.81:0,68,1051	0/0:34,0:34:70.87:0,71,1026	1/1:11,18:28:65.96:929,66,0	0/0:33,0:33:58.40:0,58,1089	0/0:27,0:27:69.21:0,69,1549	0/0:21,0:20:12.40:0,12,839	0/0:26,0:23:54.01:0,54,923	0/0:37,0:35:89.83:0,90,1438	0/0:19,0:19:32.44:0,32,578	0/0:24,0:24:53.97:0,54,995	0/0:22,0:21:26.40:0,26,324	0/0:31,0:30:31.96:0,32,574	1/1:7,8:15:32.99:465,33,0	0/0:27,0:25:63.21:0,63,1357	0/0:23,0:23:63.18:0,63,1233	0/0:7,0:6:15.01:0,15,195
chr10	5560110	.	AAG	A	1500.31	PASS	AB=0.816;AC=13;AF=0.232;AN=56;BaseQRankSum=7.347;DP=790;FS=23.927;HRun=0;HaplotypeScore=265.1920;InbreedingCoeff=-0.2966;MQ=41.55;MQ0=21;MQRankSum=-6.888;QD=4.29;ReadPosRankSum=-2.685;VQSLOD=0.7386;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:36:26.46:0,26,419	0/1:8,1:9:2.54:3,0,171	0/0:32,0:8:11.07:0,11,152	0/0:63,0:12:2.22:0,2,177	0/0:20,5:25:18.98:0,19,663	0/1:23,7:30:99:216,0,472	0/1:25,16:41:99:104,0,359	0/0:39,0:35:75.17:0,75,1036	0/1:17,15:32:99:383,0,323	0/1:33,10:43:99:278,0,1050	0/1:17,4:20:69.60:70,0,254	0/1:17,6:23:90.40:90,0,406	0/1:21,7:27:99:180,0,583	0/1:24,9:33:99:202,0,552	0/0:32,0:31:49.98:0,50,456	0/0:32,0:32:69.21:0,69,903	0/0:25,0:25:60.10:0,60,906	0/1:21,1:21:59.33:59,0,328	0/0:26,0:24:63.15:0,63,881	0/0:36,0:34:69.20:0,69,921	0/1:15,5:20:30.26:30,0,187	0/0:21,0:21:45.14:0,45,632	0/1:18,2:19:29.89:30,0,250	0/1:21,7:27:1.66:2,0,221	0/0:16,0:16:31.64:0,32,287	0/0:27,0:25:41.33:0,41,947	0/0:22,0:22:45.15:0,45,747	0/0:7,0:6:9.03:0,9,143
chr10	5560128	.	C	CAG	10214.27	PASS	AB=0.968;AC=48;AF=0.857;AN=56;BaseQRankSum=-4.248;DP=777;FS=5.895;HRun=0;HaplotypeScore=258.7166;InbreedingCoeff=0.2072;MQ=41.02;MQ0=20;MQRankSum=0.877;QD=14.87;ReadPosRankSum=0.681;VQSLOD=4.2025;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:31,1:32:24.12:377,24,0	1/1:8,0:8:4.32:75,4,0	0/0:30,0:6:6.86:0,7,64	0/0:59,0:10:2.80:0,3,36	1/1:24,2:26:26.64:290,27,0	1/1:26,3:29:11.38:309,11,0	1/1:45,1:46:21.94:149,22,0	1/1:9,27:35:78.18:1197,78,0	0/1:31,1:32:44.39:291,0,44	0/1:37,2:39:22.58:571,0,23	1/1:22,0:21:14.43:151,14,0	1/1:19,3:22:32.65:355,33,0	1/1:24,3:27:4.02:290,4,0	1/1:31,3:34:35.08:467,35,0	1/1:4,25:27:41.90:706,42,0	1/1:29,1:30:12.29:442,12,0	1/1:12,14:26:48.16:810,48,0	0/1:23,0:22:44.88:45,0,50	1/1:29,0:26:1.50:288,1,0	1/1:28,0:26:24.51:533,25,0	1/1:22,0:22:9.68:215,10,0	0/1:18,1:18:8.19:207,0,8	1/1:21,1:21:34.89:241,35,0	1/1:26,0:26:8.81:142,9,0	1/1:4,13:17:24.08:401,24,0	1/1:8,20:25:39.09:899,39,0	1/1:2,23:25:39.13:662,39,0	1/1:2,8:9:6.02:101,6,0
chr10	5560132	.	GAGAGAC	G	19208.82	PASS	AB=0.970;AC=41;AF=0.732;AN=56;BaseQRankSum=-2.384;DP=763;FS=1.354;HRun=0;HaplotypeScore=255.8122;InbreedingCoeff=0.4943;MQ=39.86;MQ0=22;MQRankSum=-4.312;QD=31.75;ReadPosRankSum=-3.119;VQSLOD=3.8276;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:18,14:32:48.99:1116,49,0	1/1:1,7:8:15.05:342,15,0	0/0:27,0:5:1.58:0,2,72	0/0:58,0:7:3.01:0,3,49	1/1:15,10:25:41.93:782,42,0	1/1:15,15:30:49.96:1216,50,0	1/1:9,35:44:27.09:579,27,0	0/1:32,0:31:99:174,0,748	1/1:12,19:31:81.14:1753,81,0	1/1:17,21:38:77.66:1909,78,0	1/1:5,17:21:27.08:571,27,0	1/1:9,13:22:49.05:1032,49,0	1/1:10,16:26:63.67:1381,64,0	1/1:19,16:35:80.28:1661,80,0	0/1:28,0:26:40.41:40,0,792	1/1:12,18:30:68.64:1481,69,0	0/1:24,0:24:49.22:49,0,373	0/1:19,3:22:29.76:447,0,30	1/1:8,18:23:54.11:989,54,0	1/1:12,16:26:69.24:1435,69,0	1/1:18,6:24:9:376,9,0	1/1:10,9:18:36.02:711,36,0	1/1:2,20:21:36.12:812,36,0	1/1:16,10:26:17.32:353,17,0	0/0:16,0:16:20.66:0,21,385	0/0:31,0:27:10.22:0,10,1196	0/0:25,0:25:34.14:0,34,714	0/1:10,0:9:0.14:0,0,21
chr10	5560136	.	GAC	G	7019.69	PASS	AB=0.980;AC=40;AF=0.714;AN=56;BaseQRankSum=6.622;DP=759;FS=0.832;HRun=0;HaplotypeScore=272.9056;InbreedingCoeff=0.7387;MQ=40.21;MQ0=22;MQRankSum=-4.781;QD=12.49;ReadPosRankSum=-2.801;VQSLOD=3.4362;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:33,1:34:67.64:418,68,0	1/1:8,0:8:14.70:101,15,0	0/1:28,0:6:11.28:11,0,49	0/0:55,0:6:2.80:0,3,52	1/1:24,1:25:47.54:399,48,0	1/1:30,1:31:64.78:498,65,0	1/1:40,1:41:27.48:189,27,0	0/0:36,0:34:15.68:0,16,487	1/1:29,3:32:81.90:713,82,0	1/1:38,2:40:66.22:641,66,0	1/1:20,0:19:26.72:205,27,0	1/1:21,0:21:38.01:377,38,0	1/1:26,1:27:69.26:553,69,0	1/1:33,1:34:82.05:705,82,0	0/0:29,0:27:35.35:0,35,355	1/1:29,2:31:64.02:431,64,0	0/1:23,1:24:10.84:11,0,351	1/1:23,3:25:0.82:260,1,0	1/1:23,0:20:51.42:364,51,0	1/1:26,1:25:55.71:369,56,0	1/1:19,4:23:17.50:157,18,0	1/1:17,1:17:32.20:211,32,0	1/1:22,0:21:35.53:254,36,0	1/1:25,2:27:18.27:154,18,0	0/0:13,0:13:13.80:0,14,168	0/0:30,0:26:56.80:0,57,560	0/0:25,0:25:44.55:0,45,416	0/0:9,0:8:5.93:0,6,47
chr10	5560138	.	C	CAGAG	6285.22	PASS	AB=0.986;AC=34;AF=0.607;AN=56;BaseQRankSum=6.405;DP=743;FS=3.919;HRun=0;HaplotypeScore=292.8986;InbreedingCoeff=0.6033;MQ=40.26;MQ0=21;MQRankSum=-5.116;QD=12.50;ReadPosRankSum=-4.661;VQSLOD=3.3092;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:32,0:34:2.08:205,0,2	1/1:7,0:7:9.27:41,9,0	0/0:23,0:6:1.44:0,1,26	0/0:49,0:6:3.01:0,3,37	1/1:24,0:24:3.97:232,4,0	1/1:30,1:31:43.89:492,44,0	1/1:39,0:39:19.86:164,20,0	0/0:37,0:35:65.92:0,66,627	1/1:31,1:32:71.50:829,71,0	1/1:39,0:39:76.13:749,76,0	1/1:18,1:18:24.73:248,25,0	1/1:21,0:21:35.77:417,36,0	1/1:26,0:26:26.56:550,27,0	1/1:31,1:32:52.12:716,52,0	0/0:29,0:27:44.20:0,44,378	0/1:31,0:31:21.71:237,0,22	0/0:24,0:25:42.82:0,43,318	1/1:27,0:26:6.94:411,7,0	0/1:22,0:18:44.64:227,0,45	1/1:27,0:25:14.45:175,14,0	1/1:24,1:25:21.79:176,22,0	0/1:18,0:17:25.81:73,0,26	1/1:22,0:21:26.37:167,26,0	1/1:27,0:27:17.50:176,17,0	0/0:13,0:13:23.27:0,23,141	0/0:28,0:24:56.73:0,57,464	0/0:25,0:25:38.04:0,38,276	0/0:9,0:8:5.21:0,5,22
chr10	5560144	.	G	GAGAA	4928.53	PASS	AB=0.977;AC=29;AF=0.518;AN=56;BaseQRankSum=11.635;DP=723;FS=2.072;HRun=0;HaplotypeScore=290.1468;InbreedingCoeff=0.3015;MQ=39.80;MQ0=17;MQRankSum=-7.385;QD=9.92;ReadPosRankSum=-2.230;VQSLOD=3.7977;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:35,0:34:47.62:265,0,48	1/1:7,0:7:7.11:55,7,0	0/0:19,0:5:14.51:0,15,149	0/0:36,0:3:3.01:0,3,32	0/1:21,1:22:3.07:146,0,3	1/1:25,3:29:35.49:421,35,0	1/1:39,1:40:9.21:232,9,0	0/0:40,0:38:86.84:0,87,1294	1/1:31,1:32:23.80:535,24,0	0/1:36,1:37:42.42:401,0,42	1/1:19,0:18:23.85:189,24,0	1/1:17,2:19:42.83:401,43,0	0/1:22,3:25:4.29:430,0,4	1/1:28,2:30:63.10:575,63,0	0/0:29,0:27:47.03:0,47,695	0/1:31,1:32:99:213,0,116	0/0:25,0:25:48.06:0,48,664	0/1:25,0:25:79.32:239,0,79	0/1:25,0:19:83.99:84,0,124	0/1:31,0:29:94.42:221,0,94	1/1:21,0:21:16.44:125,16,0	0/1:18,0:17:52.94:53,0,119	1/1:22,1:22:14.62:237,15,0	1/1:27,0:27:1:105,1,0	0/0:15,0:15:24.06:0,24,297	0/0:30,0:26:66.80:0,67,943	0/0:24,0:24:40.36:0,40,552	0/0:8,0:7:5.80:0,6,42
chr10	5560156	.	AAGAG	A	456.17	PASS	AB=0.727;AC=1;AF=0.018;AN=56;BaseQRankSum=0.588;DP=730;FS=0.000;HRun=0;HaplotypeScore=295.8347;InbreedingCoeff=0.0203;MQ=46.20;MQ0=13;MQRankSum=-0.242;QD=19.01;ReadPosRankSum=-1.297;VQSLOD=2.2095;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:40:62.03:0,62,960	0/0:7,0:7:11.89:0,12,117	0/0:23,0:8:21.07:0,21,448	0/0:39,0:7:4.32:0,4,80	0/0:21,0:21:42.41:0,42,693	0/0:28,0:28:59.70:0,60,818	0/0:38,0:38:41.41:0,41,492	0/0:39,0:38:93.06:0,93,1812	0/0:34,0:34:80.90:0,81,1241	0/0:33,0:33:79.85:0,80,1412	0/0:20,0:20:33.14:0,33,432	0/0:22,0:22:36.60:0,37,463	0/0:30,0:30:74.83:0,75,1100	0/0:31,0:31:59.11:0,59,808	0/0:29,0:27:57.20:0,57,1399	0/0:30,0:30:60.53:0,61,978	0/1:15,9:24:14.32:530,0,14	0/0:27,0:27:52.78:0,53,1077	0/0:22,0:17:42.05:0,42,709	0/0:26,0:25:50.67:0,51,848	0/0:23,0:23:23.68:0,24,396	0/0:16,0:15:26.98:0,27,452	0/0:22,0:22:29.24:0,29,326	0/0:28,0:28:23.49:0,23,472	0/0:17,0:17:30.09:0,30,649	0/0:28,0:25:74.95:0,75,1678	0/0:23,0:21:39.05:0,39,924	0/0:8,0:7:2.96:0,3,19
chr10	5560236	.	GAC	G	5185.61	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-7.031;DP=661;FS=1.836;HRun=0;HaplotypeScore=133.2484;InbreedingCoeff=0.9806;MQ=59.19;MQ0=18;MQRankSum=-0.294;QD=16.41;ReadPosRankSum=5.702;VQSLOD=4.6932;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:38:33.40:0,33,276	1/1:1,7:8:11.82:147,12,0	0/0:33,0:19:35.24:0,35,466	0/0:54,0:31:43.34:0,43,561	1/1:1,10:11:9.50:111,9,0	1/1:5,16:20:24.08:295,24,0	1/1:3,25:29:29.71:307,30,0	0/0:19,0:38:71.92:0,72,656	1/1:4,24:28:48.15:586,48,0	1/1:3,16:19:48.06:525,48,0	1/1:3,13:17:24.29:253,24,0	1/1:1,13:14:21.07:258,21,0	1/1:8,9:17:30.09:369,30,0	1/1:3,24:27:30.09:365,30,0	0/0:27,0:25:30.07:0,30,307	0/0:19,0:19:26.03:0,26,215	0/0:6,0:16:26.96:0,27,231	1/1:5,23:27:36.11:442,36,0	0/0:14,0:11:24.05:0,24,285	0/0:23,0:23:43.06:0,43,352	1/1:5,40:46:54.64:622,55,0	0/0:11,0:11:18.96:0,19,107	1/1:5,6:11:23.99:262,24,0	1/1:7,31:39:53.98:641,54,0	0/0:17,0:16:24.01:0,24,251	0/0:10,0:22:59.89:0,60,524	0/0:4,0:19:44.98:0,45,406	0/0:2,0:7:12:0,12,106
chr10	5560252	.	C	CAG	2756.22	PASS	AB=1.000;AC=18;AF=0.321;AN=56;BaseQRankSum=-4.418;DP=663;FS=5.468;HRun=0;HaplotypeScore=143.1086;InbreedingCoeff=0.5667;MQ=70.09;MQ0=17;MQRankSum=-0.909;QD=10.72;ReadPosRankSum=3.339;VQSLOD=3.3932;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:35,0:35:0.40:0,0,97	0/0:9,0:9:17.94:0,18,139	0/0:35,0:27:68.67:0,69,773	0/0:44,0:34:76.15:0,76,851	0/0:12,0:12:11.94:0,12,92	0/0:22,0:21:23.90:0,24,181	0/0:29,0:29:29.91:0,30,233	0/1:35,0:35:99:174,0,284	0/0:30,0:30:56.67:0,57,426	0/0:24,0:24:56.86:0,57,470	0/0:17,0:17:23.88:0,24,182	0/0:16,0:15:26.85:0,27,201	0/0:15,0:15:38.75:0,39,286	0/0:31,0:31:32.88:0,33,254	1/1:0,26:24:33.04:548,33,0	1/1:1,1:21:21.06:248,21,0	0/1:22,0:21:99:144,0,130	0/0:22,0:21:35.86:0,36,273	1/1:15,2:18:35.97:350,36,0	1/1:3,1:19:36.11:438,36,0	0/0:51,0:50:74.70:0,75,577	1/1:0,0:12:9.03:105,9,0	0/0:13,0:13:32.93:0,33,278	0/0:36,0:36:60.24:0,60,458	1/1:2,12:14:18.06:318,18,0	0/1:21,0:21:3.59:257,0,4	0/1:25,0:22:30.81:272,0,31	0/1:8,0:8:7.22:91,0,7
chr10	5560476	.	G	GAAAAGA	13227.37	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-2.865;DP=472;FS=11.803;HRun=0;HaplotypeScore=91.0303;InbreedingCoeff=0.6160;MQ=53.54;MQ0=12;MQRankSum=-3.128;QD=31.72;ReadPosRankSum=2.454;VQSLOD=3.4078;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:26:12.92:294,13,0	1/1:5,0:4:11.99:210,12,0	0/0:25,0:11:14.17:0,14,179	0/0:29,0:12:4.02:0,4,222	1/1:3,12:18:27.09:694,27,0	1/1:2,12:14:24.08:780,24,0	1/1:1,8:9:11.97:300,12,0	1/1:13,16:33:64:1382,64,0	1/1:2,9:12:18.06:584,18,0	1/1:4,10:14:33.11:771,33,0	1/1:2,10:11:24.08:547,24,0	1/1:1,9:11:21.07:682,21,0	1/1:2,7:9:12.04:386,12,0	1/1:2,13:15:30.10:972,30,0	1/1:5,11:17:21.07:683,21,0	1/1:15,0:16:17.99:406,18,0	1/1:9,16:24:12.04:283,12,0	1/1:3,14:18:6.02:195,6,0	1/1:24,0:22:35.68:531,36,0	1/1:15,0:14:8.99:153,9,0	1/1:5,0:4:3.01:37,3,0	1/1:7,0:7:9.03:233,9,0	1/1:3,7:11:9.83:152,10,0	1/1:6,9:14:6.02:195,6,0	1/1:3,11:15:21.07:661,21,0	1/1:10,14:23:47.97:1121,48,0	1/1:7,19:26:17.96:585,18,0	1/1:2,9:9:12.04:390,12,0
chr10	5560494	.	A	AAAAAGAAAAAG	8379.56	PASS	AB=1.000;AC=31;AF=0.554;AN=56;BaseQRankSum=1.433;DP=529;FS=1.430;HRun=0;HaplotypeScore=162.1966;InbreedingCoeff=-0.5267;MQ=67.54;MQ0=8;MQRankSum=-8.755;QD=17.83;ReadPosRankSum=6.526;VQSLOD=3.6023;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:4,1:33:15.05:657,15,0	0/1:7,0:7:80.21:80,0,95	0/0:31,0:19:31.52:0,32,551	0/0:28,0:14:9.24:0,9,379	0/1:21,0:21:99:397,0,213	0/1:19,0:19:99:242,0,208	0/1:14,0:14:99:175,0,122	0/1:40,0:39:99:176,0,458	0/1:12,0:12:48.22:197,0,48	0/1:18,0:17:99:177,0,140	0/1:13,0:13:85.43:155,0,85	0/1:15,0:15:99:214,0,112	0/1:12,0:12:87.59:117,0,88	0/1:15,0:15:36.33:359,0,36	0/1:16,0:16:78.57:218,0,79	1/1:5,12:20:18.06:857,18,0	0/1:23,0:21:14.48:14,0,153	0/1:18,0:18:56.09:56,0,92	1/1:0,11:21:63.18:1713,63,0	1/1:1,14:20:32.80:682,33,0	0/1:5,0:4:30.20:31,0,30	1/1:2,9:13:21.05:682,21,0	0/1:16,0:15:68.87:69,0,100	0/1:14,0:14:55.68:56,0,77	0/1:20,0:20:99:269,0,187	0/1:27,0:27:99:445,0,189	0/1:27,0:26:99:183,0,102	0/1:11,0:10:50.55:158,0,51
chr10	5560970	.	CT	C	5057.62	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=8.850;DP=702;FS=4.101;HRun=3;HaplotypeScore=83.3933;InbreedingCoeff=0.9985;MQ=85.45;MQ0=0;MQRankSum=-3.109;QD=33.72;ReadPosRankSum=1.998;VQSLOD=5.4536;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,51:51:99:1860,150,0	0/0:7,0:7:21.06:0,21,286	0/0:33,0:33:84.45:0,84,1267	0/0:27,0:27:78.21:0,78,1040	0/0:24,0:24:69.22:0,69,976	0/0:28,0:28:78.24:0,78,1100	0/0:32,0:32:93.24:0,93,1266	0/0:37,0:37:99:0,108,1556	0/0:36,0:36:99:0,108,1549	0/0:15,0:15:42.14:0,42,604	0/0:19,0:19:57.18:0,57,804	0/0:24,0:24:72.24:0,72,1037	0/0:21,0:21:60.18:0,60,840	0/0:26,0:26:78.26:0,78,1122	0/0:29,0:29:81.27:0,81,1167	1/1:0,30:30:84.26:1041,84,0	0/0:23,0:23:66.19:0,66,911	0/0:20,0:20:57.17:0,57,801	1/1:2,26:28:75.23:929,75,0	1/1:0,23:23:51.16:632,51,0	0/0:44,0:44:99:0,129,1819	1/1:1,17:18:48.15:595,48,0	0/0:16,0:16:45.15:0,45,648	0/0:30,0:30:90.30:0,90,1296	0/0:17,0:17:48.15:0,48,675	0/0:22,0:22:66.22:0,66,935	0/0:14,0:14:36.12:0,36,518	0/0:8,0:8:24.08:0,24,346
chr10	5561708	.	GACCCTTCCAC	G	26760.37	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=3.191;DP=565;FS=3.975;HRun=0;HaplotypeScore=198.0151;InbreedingCoeff=0.8865;MQ=74.13;MQ0=0;MQRankSum=-8.006;QD=50.88;ReadPosRankSum=6.274;VQSLOD=4.2927;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:16,32:48:69.24:2047,69,0	1/1:5,11:16:30.10:940,30,0	0/0:18,0:18:39.13:0,39,1400	0/0:21,0:21:36.12:0,36,1464	1/1:2,18:20:45.09:1277,45,0	1/1:8,14:22:33.11:1034,33,0	1/1:11,22:33:48.16:1504,48,0	1/1:11,12:23:36.12:1061,36,0	1/1:7,18:25:45.15:1408,45,0	1/1:5,18:23:54.19:1692,54,0	1/1:2,9:11:24.08:752,24,0	1/1:4,18:22:36.12:1129,36,0	1/1:3,17:20:36.12:1128,36,0	1/1:7,19:26:51.18:1597,51,0	1/1:7,14:21:36.12:1128,36,0	1/1:3,15:18:42.14:1317,42,0	1/1:7,13:20:24.08:752,24,0	1/1:6,11:17:18.06:564,18,0	1/1:9,5:14:14.98:326,15,0	1/1:4,3:7:3.01:94,3,0	1/1:17,25:41:23.29:673,23,0	1/1:3,5:10:21.07:658,21,0	1/1:4,13:17:39.13:1218,39,0	1/1:6,10:16:15.05:470,15,0	1/1:1,5:6:15.05:470,15,0	1/1:5,22:27:60.16:1735,60,0	1/1:3,10:13:30.10:941,30,0	1/1:0,9:9:27.09:846,27,0
chr10	5561914	.	AGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGAGG	A	15277.89	PASS	AC=34;AF=0.680;AN=50;BaseQRankSum=5.933;DP=441;FS=7.910;HRun=0;HaplotypeScore=300.0803;InbreedingCoeff=0.7196;MQ=57.29;MQ0=7;MQRankSum=-3.463;QD=41.86;ReadPosRankSum=2.185;VQSLOD=1.8133;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:12.04:0,12,471	1/1:3,8:11:18.06:1563,18,0	0/0:16,0:7:6.02:0,6,147	0/0:19,0:12:21.07:0,21,627	1/1:6,17:23:27.46:907,27,0	1/1:8,11:19:12.04:1042,12,0	1/1:23,0:23:3.01:56,3,0	./.	1/1:7,15:22:21.07:1823,21,0	1/1:10,14:24:30:1043,30,0	1/1:10,8:18:5.98:280,6,0	1/1:9,15:24:9.03:781,9,0	1/1:8,14:22:15.05:1302,15,0	1/1:13,14:26:12.04:1042,12,0	./.	0/0:1,0:1:3:0,3,28	0/0:5,0:5:9:0,9,271	1/1:14,8:20:12.04:685,12,0	0/0:5,0:5:12.01:0,12,311	0/0:3,0:3:6.02:0,6,287	1/1:19,18:37:6.02:411,6,0	0/0:1,0:1:3.01:0,3,68	1/1:12,14:26:15.05:827,15,0	1/1:13,9:22:0.85:257,1,0	./.	1/1:8,18:26:45.92:1560,46,0	1/1:5,10:14:14.61:1177,15,0	1/1:0,4:4:6.02:521,6,0
chr10	5561946	.	AGG	A	1777.74	PASS	AC=36;AF=0.692;AN=52;BaseQRankSum=6.926;DP=263;FS=15.357;HRun=3;HaplotypeScore=112.2970;InbreedingCoeff=0.7091;MQ=45.35;MQ0=14;MQRankSum=-5.114;QD=8.04;ReadPosRankSum=4.829;VQSLOD=-0.7621;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:7:21:0,21,270	1/1:8,0:8:17.25:88,17,0	0/0:11,0:3:8.90:0,9,131	0/0:4,0:2:0:0,0,0	1/1:17,0:17:20.99:228,21,0	1/1:11,0:10:11.47:58,11,0	1/1:0,12:12:17.84:162,18,0	1/1:2,4:5:9.02:111,9,0	1/1:15,0:15:20.13:102,20,0	1/1:15,0:14:23.57:197,24,0	1/1:9,0:8:2.88:15,3,0	1/1:15,0:15:8.63:44,9,0	1/1:14,0:14:14.34:73,14,0	1/1:15,0:14:11.50:58,12,0	0/0:6,0:5:15.04:0,15,250	./.	0/0:2,0:1:3.01:0,3,58	1/1:9,0:8:8.76:68,9,0	0/0:2,0:2:6.02:0,6,111	0/0:7,0:5:9.03:0,9,173	1/1:20,0:18:5.89:57,6,0	0/0:2,0:2:3.01:0,3,58	1/1:14,0:14:14.91:163,15,0	1/1:9,0:9:2.88:15,3,0	./.	1/1:18,0:18:38.93:386,39,0	1/1:10,0:10:14.47:92,14,0	1/1:4,0:4:5.75:29,6,0
chr10	5562902	.	GTGTGTGTGCTTGCATGCAAGCATGTGCA	G	2973.80	PASS	AC=8;AF=0.148;AN=54;BaseQRankSum=5.030;DP=553;FS=2.716;HRun=0;HaplotypeScore=374.0251;InbreedingCoeff=0.9280;MQ=64.82;MQ0=0;MQRankSum=0.832;QD=35.40;ReadPosRankSum=3.733;VQSLOD=1.1274;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:84.21:0,84,4361	0/0:8,0:8:14.98:0,15,839	./.	0/0:12,0:12:6.34:0,6,43	0/0:24,0:24:47.99:0,48,2554	0/0:7,0:7:12.04:0,12,372	0/0:19,0:19:48.03:0,48,2941	1/1:29,0:28:36.03:330,36,0	0/0:20,0:20:57.13:0,57,4514	0/0:17,0:17:42.10:0,42,2212	0/0:15,0:15:33.03:0,33,2422	0/0:11,0:11:24.08:0,24,1627	0/0:13,0:13:36.12:0,36,2612	0/0:18,0:18:42.14:0,42,3021	0/0:35,0:35:93.26:0,93,6158	0/0:22,0:22:51.11:0,51,2716	0/0:27,0:27:66.05:0,66,3664	0/0:8,0:8:20.94:0,21,1406	0/0:29,0:29:42.11:0,42,2353	0/0:29,0:29:60.15:0,60,3070	0/0:27,0:27:72.19:0,72,5347	0/0:26,0:26:60.18:0,60,3231	0/0:12,0:12:24:0,24,1226	0/0:12,0:12:31.35:0,31,2402	0/0:25,0:25:60.15:0,60,3534	1/1:7,28:35:74.99:1382,75,0	1/1:18,0:18:42.13:1228,42,0	1/1:2,0:2:6.02:186,6,0
chr10	5564380	.	CTGTCTGAT	C	4163.92	PASS	AB=0.513;AC=9;AF=0.161;AN=56;BaseQRankSum=11.039;DP=613;FS=17.970;HRun=0;HaplotypeScore=153.9524;InbreedingCoeff=0.8549;MQ=78.96;MQ0=1;MQRankSum=-9.877;QD=45.76;ReadPosRankSum=1.892;VQSLOD=2.5758;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,27:29:42.14:1188,42,0	0/0:10,0:10:30.10:0,30,1212	0/0:33,0:32:96.33:0,96,3634	0/0:31,0:30:78.26:0,78,2793	0/0:18,0:18:45.15:0,45,1806	0/0:17,0:17:51.18:0,51,2079	0/0:20,0:20:60.21:0,60,2377	0/0:31,0:31:78.25:0,78,2924	0/0:27,0:27:78.27:0,78,3330	0/0:16,0:16:45.15:0,45,1843	0/0:18,0:18:42.14:0,42,1746	0/0:21,0:21:60.21:0,60,2553	0/0:27,0:27:78.27:0,78,3067	0/0:27,0:27:66.23:0,66,2812	0/0:24,0:24:66.23:0,66,2613	0/1:1,19:20:81.82:1307,0,82	0/0:33,0:33:96.33:0,96,3927	0/0:35,0:35:96.33:0,96,3912	1/1:3,12:15:36.11:880,36,0	1/1:1,14:15:24.04:521,24,0	0/0:23,0:23:69.24:0,69,2836	1/1:3,9:12:11.50:269,12,0	0/0:6,0:6:18.06:0,18,595	0/0:26,0:26:75.26:0,75,3189	0/0:19,0:19:57.20:0,57,2376	0/0:17,0:17:48.15:0,48,1825	0/0:34,0:32:99:0,102,4107	0/0:8,0:8:24.08:0,24,1063
chr10	5564925	.	CGTGGTGGCAATGCTTGTGTGACTCCA	C	945.51	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.193;DP=651;FS=1.627;HRun=0;HaplotypeScore=413.0775;InbreedingCoeff=0.9423;MQ=84.52;MQ0=0;MQRankSum=-4.187;QD=41.11;ReadPosRankSum=1.757;VQSLOD=0.6026;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,105,7610	0/0:8,0:8:12.04:0,12,980	0/0:26,0:26:27.04:0,27,865	0/0:19,0:19:21.04:0,21,626	0/0:20,0:20:43.39:0,43,3000	0/0:16,0:16:36.12:0,36,2375	0/0:34,0:34:81.26:0,81,6269	0/0:28,0:28:51.15:0,51,1901	0/0:31,0:31:84.27:0,84,6844	0/0:33,0:33:81.25:0,81,5653	0/0:22,0:22:42.01:0,42,2548	0/0:19,0:19:54.17:0,54,4726	0/0:16,0:16:45.15:0,45,4539	0/0:18,0:18:45.15:0,45,4504	0/0:16,0:16:42.14:0,42,4047	0/0:20,0:20:45.12:0,45,4043	1/1:3,20:23:18.02:1036,18,0	0/0:20,0:20:51.14:0,51,4260	0/0:22,0:22:33.10:0,33,2845	0/0:28,0:28:72.25:0,72,5969	0/0:52,0:52:99:0,126,9832	0/0:24,0:24:51.14:0,51,4093	0/0:21,0:21:51.16:0,51,2906	0/0:18,0:18:39.12:0,39,3255	0/0:15,0:15:39.12:0,39,3105	0/0:25,0:25:57.18:0,57,4716	0/0:27,0:27:75.24:0,75,6242	0/0:8,0:8:15.05:0,15,1022
chr10	5566490	.	T	TCTGA	36719.62	PASS	AB=0.957;AC=45;AF=0.804;AN=56;BaseQRankSum=-9.606;DP=692;FS=0.384;HRun=0;HaplotypeScore=145.3541;InbreedingCoeff=0.8887;MQ=62.16;MQ0=1;MQRankSum=-4.822;QD=61.92;ReadPosRankSum=5.110;VQSLOD=6.5912;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,37:46:99:2734,102,0	1/1:3,13:17:39.13:1051,39,0	0/0:23,0:22:63.09:0,63,1056	0/0:15,0:14:36.12:0,36,626	1/1:4,38:43:99:2670,99,0	1/1:4,28:32:75.26:2023,75,0	1/1:5,15:20:51.17:1366,51,0	0/0:19,0:19:48.16:0,48,861	1/1:2,19:22:60.21:1576,60,0	1/1:5,17:23:54.18:1408,54,0	1/1:3,22:27:63.22:1691,63,0	1/1:4,12:17:42.10:1060,42,0	1/1:2,18:22:57.20:1534,57,0	1/1:2,23:25:69.24:1857,69,0	1/1:1,23:24:69.24:1861,69,0	1/1:4,20:24:60.21:1586,60,0	1/1:2,25:28:72.25:1942,72,0	1/1:2,11:12:33.11:889,33,0	1/1:13,8:19:51.13:1203,51,0	1/1:4,36:40:99:2909,108,0	1/1:4,28:32:66.23:1781,66,0	1/1:4,18:23:48.16:1294,48,0	1/1:7,17:25:54.19:1436,54,0	1/1:2,19:21:48.16:1295,48,0	1/1:5,19:24:57.20:1537,57,0	0/1:21,1:22:17.83:18,0,1035	0/0:25,0:25:75.24:0,75,1379	0/0:16,0:16:45.15:0,45,855
chr10	5566846	.	GT	G	10359.51	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=15.485;DP=611;FS=0.317;HRun=7;HaplotypeScore=85.9596;InbreedingCoeff=0.9996;MQ=74.78;MQ0=0;MQRankSum=-1.376;QD=27.33;ReadPosRankSum=2.120;VQSLOD=5.3673;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:84.27:0,84,1056	1/1:0,13:13:39.09:398,39,0	0/0:21,0:21:35.71:0,36,364	0/0:14,0:14:35.77:0,36,385	1/1:2,33:35:99:1008,99,0	1/1:0,19:19:54.12:551,54,0	1/1:2,11:13:27.06:276,27,0	0/0:30,0:30:84.25:0,84,1034	1/1:0,30:30:84.19:857,84,0	1/1:1,20:21:60.13:611,60,0	1/1:2,21:23:60.11:602,60,0	1/1:0,20:20:57.13:581,57,0	1/1:1,16:17:39.09:398,39,0	1/1:2,11:13:35.95:352,36,0	0/0:22,0:22:60.19:0,60,754	1/1:1,14:15:39.09:398,39,0	0/0:29,0:29:78.14:0,78,959	1/1:1,18:19:53.99:536,54,0	1/1:3,10:13:30.06:306,30,0	1/1:2,37:39:99:1037,102,0	1/1:2,13:15:36.08:367,36,0	1/1:1,20:21:57.13:582,57,0	1/1:1,27:28:78.18:795,78,0	1/1:2,23:25:69.15:704,69,0	0/0:19,0:19:51.16:0,51,641	0/0:29,1:30:50.64:0,51,940	0/0:26,0:26:75.22:0,75,930	0/0:10,0:10:30.07:0,30,350
chr10	5568197	.	G	GA	781.79	PASS	AB=0.962;AC=12;AF=0.214;AN=56;BaseQRankSum=-2.624;DP=421;FS=4.872;HRun=0;HaplotypeScore=85.7443;InbreedingCoeff=0.6333;MQ=58.34;MQ0=8;MQRankSum=-0.930;QD=7.59;ReadPosRankSum=-3.150;VQSLOD=2.4516;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,3:34:6.28:0,6,276	0/0:7,0:7:19.68:0,20,105	1/1:19,0:3:2.74:12,3,0	0/0:10,0:4:7.98:0,8,47	0/0:21,0:21:33.14:0,33,196	0/0:11,0:11:28.34:0,28,157	0/0:14,0:14:19.96:0,20,108	1/1:4,16:20:44.24:366,44,0	0/0:6,0:7:9.22:0,9,43	0/0:23,0:21:41.50:0,42,224	0/0:21,0:21:35.83:0,36,185	0/0:9,0:10:12.05:0,12,66	0/0:13,0:13:20.15:0,20,112	0/0:9,0:9:11.17:0,11,70	0/0:18,1:19:13.23:0,13,165	0/0:10,0:10:30.10:0,30,419	0/0:21,0:20:32.99:0,33,184	0/0:11,0:10:15.78:0,16,92	0/0:23,0:23:66.71:0,67,792	0/0:22,0:22:59.22:0,59,772	0/1:10,0:9:19.47:20,0,19	0/0:6,0:6:18.05:0,18,235	0/0:15,0:15:37.26:0,37,211	0/0:11,0:11:25.24:0,25,145	0/1:11,1:12:9.27:9,0,65	1/1:8,13:22:25.69:308,26,0	1/1:1,14:16:3.86:168,4,0	1/1:1,2:3:6.01:58,6,0
chr10	5568198	.	G	GA	1159.96	PASS	AB=0.990;AC=21;AF=0.375;AN=56;BaseQRankSum=-2.946;DP=441;FS=2.417;HRun=11;HaplotypeScore=87.4769;InbreedingCoeff=0.1259;MQ=57.75;MQ0=8;MQRankSum=1.257;QD=4.39;ReadPosRankSum=-6.330;VQSLOD=-0.0463;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:35,0:35:42.21:42,0,167	0/0:7,0:7:18.91:0,19,81	1/1:22,0:3:2.74:12,3,0	0/1:11,0:4:7.54:18,0,8	0/0:22,0:22:13.76:0,14,117	0/1:11,0:11:2.71:3,0,80	0/0:15,0:15:17.78:0,18,77	1/1:23,0:24:43.42:375,43,0	0/0:7,0:7:10.14:0,10,40	0/0:24,0:22:6.87:0,7,120	0/1:21,0:21:17.50:18,0,78	0/1:10,0:10:8.72:9,0,38	0/1:13,0:13:38.23:41,0,38	0/1:9,0:9:11.10:11,0,42	0/0:19,0:19:5.21:0,5,98	0/0:10,0:10:26.89:0,27,209	0/0:20,0:20:29.58:0,30,135	0/0:12,0:11:18.31:0,18,83	0/1:20,3:24:38.79:39,0,246	0/0:22,1:23:11.43:0,11,271	0/1:9,0:8:4.34:20,0,4	0/0:5,0:6:13.77:0,14,98	0/1:16,0:16:12.09:12,0,106	0/0:11,0:11:0.50:0,1,79	0/1:13,0:13:27.16:75,0,27	1/1:23,0:22:27.43:325,27,0	1/1:19,0:19:26.71:263,27,0	1/1:4,0:4:8.76:73,9,0
chr10	5568402	.	GT	G	1445.92	PASS	AB=1.000;AC=9;AF=0.167;AN=54;BaseQRankSum=-4.115;DP=414;FS=3.737;HRun=11;HaplotypeScore=62.0697;InbreedingCoeff=0.8324;MQ=71.14;MQ0=2;MQRankSum=0.269;QD=14.18;ReadPosRankSum=1.849;VQSLOD=4.1837;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:3,0:24:62.71:0,63,322	./.	0/0:15,0:13:12.08:0,12,119	0/1:11,0:6:1.21:1,0,40	0/0:4,0:27:62.73:0,63,351	0/0:2,0:8:20.04:0,20,110	0/0:3,0:12:22.73:0,23,114	1/1:9,15:25:44.91:366,45,0	0/0:3,0:16:34.26:0,34,188	0/0:3,0:19:48.82:0,49,267	0/0:4,0:20:43.53:0,44,232	0/0:1,0:3:5.68:0,6,28	0/0:1,0:9:19.89:0,20,99	0/0:3,0:12:25.85:0,26,145	0/0:3,0:14:28.74:0,29,172	0/0:10,1:11:5.30:0,5,224	0/0:24,0:24:63.13:0,63,657	0/0:3,0:13:22.73:0,23,113	0/0:23,1:24:35.33:0,35,544	0/0:16,0:16:44.89:0,45,432	0/0:3,0:10:14.20:0,14,71	0/0:5,0:5:15.04:0,15,160	0/0:0,0:11:31.25:0,31,156	0/0:2,0:5:11.36:0,11,57	0/0:2,0:9:17.08:0,17,86	1/1:4,16:20:44.93:369,45,0	1/1:2,21:25:66.99:529,67,0	1/1:1,20:21:15.96:337,16,0
chr10	5569376	.	GATGAGT	G	3453.44	PASS	AB=0.583;AC=5;AF=0.089;AN=56;BaseQRankSum=10.732;DP=627;FS=6.258;HRun=0;HaplotypeScore=127.1412;InbreedingCoeff=0.7799;MQ=60.29;MQ0=0;MQRankSum=-11.247;QD=55.70;ReadPosRankSum=2.797;VQSLOD=3.9223;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:6,15:21:62.73:867,0,63	0/0:9,0:9:27.09:0,27,937	0/0:26,0:26:78.27:0,78,2542	0/0:23,0:23:63.21:0,63,1956	0/0:35,0:34:99:0,99,3473	0/0:29,0:29:84.27:0,84,2813	0/0:17,0:17:48.16:0,48,1696	0/0:29,0:29:81.28:0,81,2814	0/0:26,0:26:75.26:0,75,2623	0/0:22,0:22:60.21:0,60,2078	0/0:17,0:17:48.16:0,48,1671	0/0:16,0:16:48.16:0,48,1696	0/0:18,0:18:54.19:0,54,1791	0/0:25,0:25:72.25:0,72,2402	1/1:2,15:17:42.14:979,42,0	0/0:22,0:22:66.23:0,66,2283	0/0:26,0:26:72.25:0,72,2543	0/0:12,0:12:36.12:0,36,1272	0/0:22,0:21:63.21:0,63,2033	0/0:26,0:26:75.26:0,75,2636	0/0:34,0:34:93.32:0,93,3220	0/0:14,0:14:39.13:0,39,1371	0/0:26,0:26:78.27:0,78,2705	0/0:23,0:23:66.18:0,66,2226	1/1:0,24:24:69.24:1608,69,0	0/0:28,0:28:81.28:0,81,2814	0/0:23,0:23:63.22:0,63,2218	0/0:17,0:17:51.18:0,51,1802
chr10	5570746	.	G	GC	24317.07	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-9.609;DP=637;FS=7.303;HRun=0;HaplotypeScore=56.8513;InbreedingCoeff=0.9984;MQ=75.28;MQ0=0;MQRankSum=-6.696;QD=41.85;ReadPosRankSum=6.625;VQSLOD=4.6690;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,42:43:99:1772,111,0	1/1:0,10:10:30.10:477,30,0	0/0:29,0:29:80.56:0,81,998	0/0:26,0:26:60.17:0,60,856	1/1:1,14:15:42.14:668,42,0	1/1:0,18:18:51.17:814,51,0	1/1:1,38:39:96.33:1531,96,0	1/1:0,28:28:81.19:1191,81,0	1/1:0,31:31:75.26:1198,75,0	1/1:1,17:18:51.15:787,51,0	1/1:0,10:10:30.10:474,30,0	1/1:0,21:21:60.20:958,60,0	1/1:1,26:27:66.23:1054,66,0	1/1:0,24:24:63.21:1006,63,0	1/1:0,23:23:54.18:863,54,0	1/1:0,16:16:36.12:575,36,0	1/1:1,22:23:57.19:910,57,0	1/1:1,29:30:84.29:1341,84,0	1/1:1,22:22:63.16:925,63,0	1/1:0,16:16:48.03:707,48,0	1/1:1,33:34:87.14:1386,87,0	1/1:0,16:16:42.14:656,42,0	1/1:0,10:10:27.09:431,27,0	1/1:0,24:24:69.24:1102,69,0	1/1:0,18:18:45.15:710,45,0	1/1:1,26:27:78.24:1212,78,0	1/1:0,23:22:63.21:1005,63,0	1/1:1,13:14:28.04:564,28,0
chr10	5571312	.	TTTCTTCTTC	T	5902.88	PASS	AB=0.976;AC=31;AF=0.574;AN=54;BaseQRankSum=-8.710;DP=359;FS=8.860;HRun=0;HaplotypeScore=107.8207;InbreedingCoeff=-0.3120;MQ=64.42;MQ0=4;MQRankSum=2.143;QD=21.16;ReadPosRankSum=-1.629;VQSLOD=3.1013;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:21,0:21:99:373,0,367	0/1:6,0:6:87.50:99,0,87	0/0:47,0:25:44.99:0,45,905	0/0:27,0:15:12.19:0,12,387	1/1:12,0:12:12.03:201,12,0	0/1:9,0:9:99:183,0,106	0/1:15,0:15:27.34:403,0,27	0/1:6,14:20:99:659,0,208	0/1:5,0:5:30.64:65,0,31	0/1:17,0:17:93.48:442,0,93	1/1:8,0:8:9.03:150,9,0	0/1:11,0:11:68.90:98,0,69	1/1:9,0:9:8.87:204,9,0	0/1:7,0:7:33.83:34,0,34	0/1:16,0:16:99:216,0,377	1/1:8,0:8:21.04:322,21,0	0/0:5,0:5:12:0,12,270	0/1:8,0:8:54.34:282,0,54	1/1:3,3:6:8.89:87,9,0	0/1:11,0:11:37.14:119,0,37	0/1:12,0:12:86.89:204,0,87	0/1:12,0:12:2.34:291,0,2	0/1:10,0:10:70.92:154,0,71	1/1:16,0:16:6.28:239,6,0	0/1:18,0:18:95.76:424,0,96	1/1:2,10:12:26.88:424,27,0	0/1:10,0:10:99:230,0,124	./.
chr10	5573682	.	GC	G	715.75	PASS	AC=2;AF=0.037;AN=54;BaseQRankSum=4.062;DP=480;FS=0.842;HRun=2;HaplotypeScore=59.7305;InbreedingCoeff=0.9937;MQ=83.54;MQ0=0;MQRankSum=-1.646;QD=32.53;ReadPosRankSum=0.766;VQSLOD=3.3493;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:75.25:0,75,1110	0/0:8,0:8:24.08:0,24,359	0/0:19,0:19:51.16:0,51,730	0/0:17,0:17:49.68:0,50,665	0/0:20,0:20:54.17:0,54,778	0/0:24,0:24:69.23:0,69,1024	0/0:23,0:23:69.22:0,69,1013	0/0:27,0:27:78.23:0,78,1127	0/0:18,0:18:51.16:0,51,745	0/0:19,0:19:54.18:0,54,808	0/0:13,0:13:39.13:0,39,583	0/0:10,0:10:30.06:0,30,424	0/0:9,0:9:27.09:0,27,404	0/0:19,0:19:57.18:0,57,822	0/0:12,0:12:36.12:0,36,538	0/0:13,0:13:39.13:0,39,584	1/1:0,22:22:63.20:810,63,0	0/0:10,0:10:30.10:0,30,449	0/0:21,0:21:63.21:0,63,915	0/0:17,0:17:51.17:0,51,763	0/0:17,0:17:51.17:0,51,755	0/0:23,0:23:66.22:0,66,975	0/0:17,0:17:51.17:0,51,762	0/0:17,0:17:48.16:0,48,697	0/0:9,0:9:24.08:0,24,358	0/0:30,0:30:87.29:0,87,1300	0/0:19,0:19:54.18:0,54,801	./.
chr10	5573826	.	A	AT	4323.35	PASS	AB=1.000;AC=51;AF=0.911;AN=56;BaseQRankSum=3.253;DP=244;FS=3.899;HRun=2;HaplotypeScore=188.2417;InbreedingCoeff=0.6210;MQ=75.95;MQ0=1;MQRankSum=-5.138;QD=20.39;ReadPosRankSum=1.324;VQSLOD=4.7715;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:14:21.08:171,21,0	1/1:4,0:4:11.97:101,12,0	0/0:17,0:13:38.43:0,38,426	0/0:15,0:13:26.56:0,27,325	1/1:9,0:9:23.84:188,24,0	1/1:11,0:11:27.83:240,28,0	1/1:10,0:10:26.86:227,27,0	1/1:10,0:10:29.86:258,30,0	1/1:12,2:14:29.64:217,30,0	1/1:7,0:7:20.95:170,21,0	1/1:7,0:6:11.99:103,12,0	1/1:12,0:12:35.83:283,36,0	1/1:10,0:10:29.71:246,30,0	1/1:8,0:8:23.94:208,24,0	1/1:6,0:6:17.95:150,18,0	1/1:6,0:6:17.96:145,18,0	1/1:8,1:9:20.86:189,21,0	1/1:5,0:5:8.98:122,9,0	1/1:4,0:4:11.98:102,12,0	1/1:10,0:9:23.92:207,24,0	1/1:4,0:4:3.37:47,3,0	1/1:9,4:12:20.01:196,20,0	1/1:4,0:3:8.98:74,9,0	0/1:6,0:6:12.73:14,0,13	1/1:7,0:6:17.95:153,18,0	1/1:11,0:11:32.85:282,33,0	1/1:10,0:10:26.59:205,27,0	1/1:1,0:1:3:25,3,0
chr10	5573954	.	C	CACACAG	5167.06	PASS	AB=1.000;AC=37;AF=0.661;AN=56;BaseQRankSum=-4.538;DP=643;FS=5.308;HRun=0;HaplotypeScore=137.6988;InbreedingCoeff=0.0395;MQ=47.60;MQ0=46;MQRankSum=3.623;QD=9.77;ReadPosRankSum=3.977;VQSLOD=3.4765;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:38,0:32:28.93:218,29,0	0/1:10,0:9:8.84:9,0,11	0/0:26,0:8:8.94:0,9,80	0/0:24,0:7:6.45:0,6,52	1/1:23,0:21:5.50:67,6,0	1/1:21,0:21:19.91:239,20,0	1/1:26,0:25:4.48:247,4,0	0/1:34,0:31:20.86:385,0,21	0/0:33,0:33:6.16:0,6,49	1/1:22,0:18:4.94:372,5,0	1/1:15,0:12:20.93:191,21,0	0/1:18,0:18:3.72:201,0,4	1/1:10,0:16:9.42:167,9,0	1/1:9,11:18:6.02:145,6,0	1/1:15,2:17:20.38:174,20,0	0/1:15,0:15:53.54:230,0,54	0/0:31,0:29:56.47:0,56,454	0/1:24,0:23:40.97:230,0,41	0/1:24,0:20:63.81:227,0,64	0/1:18,0:17:3.70:189,0,4	1/1:33,0:30:18.10:295,18,0	0/1:22,0:21:85.68:181,0,86	1/1:10,11:19:2.94:32,3,0	1/1:33,0:29:27.08:708,27,0	0/1:18,0:15:43.61:104,0,44	0/1:37,0:34:99:348,0,111	0/1:13,0:13:45.64:119,0,46	1/1:8,0:4:11.91:87,12,0
chr10	5573956	.	C	CACAG	4858.53	PASS	AB=0.997;AC=32;AF=0.571;AN=56;BaseQRankSum=-4.001;DP=637;FS=15.895;HRun=0;HaplotypeScore=121.7524;InbreedingCoeff=-0.1309;MQ=47.04;MQ0=48;MQRankSum=3.202;QD=9.51;ReadPosRankSum=3.727;VQSLOD=2.9761;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:39,0:33:49.03:197,0,49	0/1:10,0:9:5.39:14,0,5	0/0:24,0:6:8.97:0,9,82	0/0:21,0:4:6.45:0,6,52	1/1:5,11:21:6:104,6,0	1/1:21,0:21:21.63:199,22,0	0/1:27,0:26:6.90:229,0,7	0/1:35,0:31:26.48:385,0,26	0/0:8,21:31:4.43:0,4,40	0/1:23,0:18:1.36:315,0,1	1/1:15,0:12:19.96:148,20,0	0/1:18,0:18:22.26:212,0,22	1/1:16,0:16:4.37:121,4,0	1/1:18,0:16:6.02:133,6,0	1/1:21,0:19:20.30:174,20,0	0/1:14,0:14:30.06:243,0,30	0/0:31,0:29:59.22:0,59,434	0/1:24,1:24:49.73:362,0,50	0/1:22,0:19:94.49:206,0,94	0/1:17,0:16:28.99:189,0,29	1/1:34,0:31:1.19:277,1,0	0/1:22,0:21:78.28:181,0,78	0/0:19,0:16:2.60:0,3,11	1/1:33,0:29:5.94:538,6,0	0/1:18,0:15:54.54:55,0,56	0/1:37,0:34:99:369,0,157	0/1:14,0:14:44.95:120,0,45	1/1:8,0:4:11.91:87,12,0
chr10	5573958	.	C	CAG	4148.54	PASS	AB=0.975;AC=26;AF=0.464;AN=56;BaseQRankSum=-4.493;DP=631;FS=36.843;HRun=0;HaplotypeScore=106.6521;InbreedingCoeff=-0.5738;MQ=45.70;MQ0=51;MQRankSum=3.814;QD=7.68;ReadPosRankSum=4.577;VQSLOD=1.0334;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:38,0:32:57.20:168,0,57	0/1:2,6:9:33.43:39,0,33	0/0:23,0:5:8.97:0,9,83	0/0:19,0:2:5.98:0,6,51	1/1:21,0:19:6:94,6,0	0/1:21,0:21:16.80:168,0,17	0/1:27,0:26:61.52:205,0,62	0/1:37,0:32:46.17:382,0,46	0/1:30,0:30:8.28:36,0,8	0/1:23,0:18:87.05:276,0,87	0/1:16,0:12:16.73:119,0,17	0/1:17,0:17:44.24:176,0,44	0/1:16,0:16:18.31:100,0,18	0/1:18,0:16:3.81:54,0,4	0/1:20,0:19:1.58:151,0,2	0/1:14,0:14:56.68:181,0,57	0/0:31,0:29:36.01:0,36,353	0/1:23,1:23:69.17:266,0,69	0/1:22,0:19:99:204,0,117	0/1:17,0:16:31.39:189,0,31	0/1:38,0:34:38.87:202,0,39	0/1:23,0:21:66.25:181,0,66	0/0:18,0:15:2.68:0,3,12	0/1:32,1:29:47.26:388,0,47	0/1:17,0:14:72.93:73,0,83	0/1:35,0:32:99:322,0,193	0/1:14,0:14:67.15:89,0,67	1/1:8,0:4:11.91:87,12,0
chr10	5574573	.	CGTGTGT	C	1360.76	PASS	AB=0.694;AC=23;AF=0.426;AN=54;BaseQRankSum=-0.290;DP=502;FS=15.078;HRun=0;HaplotypeScore=107.0488;InbreedingCoeff=0.5200;MQ=62.61;MQ0=6;MQRankSum=-2.551;QD=6.70;ReadPosRankSum=0.720;VQSLOD=1.4261;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:27:6.02:0,6,101	0/1:3,2:7:69.25:94,0,69	0/0:48,0:29:3.01:0,3,42	0/0:30,0:15:2.98:0,3,21	1/1:16,0:18:6:57,6,0	1/1:9,1:11:8.82:116,9,0	1/1:11,11:23:14.14:273,14,0	0/0:22,0:22:21.02:0,21,400	1/1:8,3:11:6.02:123,6,0	1/1:9,7:17:22.69:288,23,0	1/1:8,2:11:6.02:123,6,0	1/1:6,5:11:8.96:141,9,0	1/1:12,0:13:6.88:86,7,0	1/1:15,2:16:6.02:123,6,0	0/0:20,0:20:8.56:0,9,198	0/0:20,0:20:27:0,27,542	0/0:24,0:24:17.99:0,18,364	0/1:13,8:21:34.94:52,0,35	0/0:18,0:17:9.03:0,9,193	0/0:14,0:14:24.08:0,24,576	1/1:16,0:16:2.92:17,3,0	0/0:6,0:6:9.03:0,9,257	./.	0/1:12,12:25:31.95:53,0,32	0/0:15,0:13:3.01:0,3,69	0/0:14,0:20:30:0,30,586	0/0:23,0:23:30.06:0,30,693	0/0:7,0:7:6:0,6,102
chr10	5575808	.	GTT	G	5624.64	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-2.939;DP=552;FS=0.000;HRun=15;HaplotypeScore=109.4052;InbreedingCoeff=0.7539;MQ=69.92;MQ0=1;MQRankSum=-1.228;QD=10.80;ReadPosRankSum=5.384;VQSLOD=3.7178;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,0:31:50.77:221,51,0	1/1:1,8:10:23.72:196,24,0	0/0:17,0:11:14.83:0,15,112	0/0:12,0:11:4.52:0,5,133	1/1:9,22:34:52.41:503,52,0	1/1:4,14:18:41.85:370,42,0	1/1:5,13:19:24.69:258,25,0	1/1:11,0:22:2.56:84,3,0	1/1:4,12:18:20.56:214,21,0	1/1:11,13:24:8.76:240,9,0	1/1:2,17:22:15.91:301,16,0	1/1:2,8:11:16.61:201,17,0	1/1:8,12:20:26.81:238,27,0	1/1:6,12:20:35.61:302,36,0	1/1:2,1:21:46.70:214,47,0	1/1:2,0:19:32.69:141,33,0	1/1:5,0:37:74.04:319,74,0	1/1:6,14:20:32.81:291,33,0	1/1:8,0:19:28.78:119,29,0	1/1:4,0:20:38.35:165,38,0	1/1:6,7:14:20.59:170,21,0	1/1:4,0:15:24.65:106,25,0	1/1:4,10:16:20.52:214,21,0	1/1:5,10:16:17.32:202,17,0	1/1:7,2:24:44.25:217,44,0	1/1:8,1:20:29.43:142,29,0	1/1:9,0:23:33.05:151,33,0	1/1:5,0:8:8.44:46,8,0
chr10	5576160	.	CGT	C	6021.32	PASS	AB=0.891;AC=48;AF=0.857;AN=56;BaseQRankSum=3.718;DP=708;FS=1.472;HRun=0;HaplotypeScore=118.1236;InbreedingCoeff=0.5189;MQ=65.56;MQ0=8;MQRankSum=1.193;QD=9.68;ReadPosRankSum=1.206;VQSLOD=4.8087;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:34,15:49:11.19:533,11,0	1/1:2,11:13:27.02:284,27,0	0/0:31,0:13:3.01:0,3,35	0/0:38,0:27:12.50:0,13,159	1/1:12,15:30:53.40:501,53,0	1/1:7,19:27:47.79:493,48,0	1/1:10,8:18:14.05:167,14,0	1/1:18,0:24:11.36:56,11,0	1/1:10,17:30:4.83:436,5,0	1/1:16,13:29:33.04:340,33,0	1/1:11,9:20:23.71:267,24,0	1/1:17,16:33:39.11:439,39,0	1/1:15,5:22:26.40:224,26,0	1/1:13,9:22:28.32:307,28,0	0/1:21,3:24:12.70:13,0,251	1/1:13,0:32:36.93:182,37,0	0/0:16,0:16:21:0,21,205	1/1:10,5:15:0.07:179,0,0	1/1:17,0:26:12.61:59,13,0	1/1:11,0:17:16.70:79,17,0	1/1:26,17:46:12.05:350,12,0	1/1:4,0:16:28.25:136,28,0	1/1:10,6:18:20.59:178,21,0	1/1:11,13:23:36.10:405,36,0	0/1:21,3:25:19.43:19,0,546	1/1:11,0:30:45.68:220,46,0	1/1:11,0:24:25.46:126,25,0	1/1:2,0:5:5.68:28,6,0
chr10	5577966	.	T	TA	13876.96	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-15.856;DP=723;FS=1.922;HRun=2;HaplotypeScore=64.3800;InbreedingCoeff=0.9668;MQ=83.52;MQ0=0;MQRankSum=-2.491;QD=38.33;ReadPosRankSum=2.874;VQSLOD=5.5899;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,123,1524	1/1:0,16:16:48.16:687,48,0	0/0:18,0:18:54.16:0,54,660	0/0:23,0:23:51.12:0,51,598	1/1:1,25:26:69.19:969,69,0	1/1:0,29:29:81.27:1166,81,0	1/1:2,28:30:69.23:993,69,0	0/0:27,0:27:72.21:0,72,873	1/1:1,25:26:66.22:949,66,0	1/1:0,26:26:78.25:1104,78,0	1/1:0,30:30:90.22:1253,90,0	1/1:1,27:28:72.24:1037,72,0	1/1:0,27:27:75.25:1080,75,0	1/1:1,16:17:45.15:647,45,0	0/0:21,0:21:63.19:0,63,768	0/0:32,0:32:90.28:0,90,1115	0/0:42,0:42:99:0,123,1481	1/1:1,24:25:69.23:993,69,0	0/0:17,0:17:51.14:0,51,612	0/0:33,0:33:96.27:0,96,1164	1/1:3,32:35:84.28:1209,84,0	0/0:25,0:25:75.21:0,75,904	1/1:3,20:23:60.13:838,60,0	1/1:0,24:24:66.22:950,66,0	0/0:24,0:24:72.23:0,72,892	0/0:27,2:29:0.88:0,1,897	0/0:20,0:20:57.17:0,57,691	0/0:7,0:7:18.03:0,18,208
chr10	5578360	.	CCAAT	C	11432.36	PASS	AB=0.609;AC=27;AF=0.482;AN=56;BaseQRankSum=-1.328;DP=817;FS=5.991;HRun=0;HaplotypeScore=178.5757;InbreedingCoeff=0.9533;MQ=75.49;MQ0=1;MQRankSum=-1.614;QD=29.46;ReadPosRankSum=7.564;VQSLOD=4.0665;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,102,2381	1/1:3,11:14:26.85:419,27,0	0/0:39,0:39:63.21:0,63,1422	0/0:35,0:34:66.06:0,66,1529	1/1:5,16:21:27.09:451,27,0	1/1:4,17:21:48.16:803,48,0	1/1:8,18:26:33.11:551,33,0	0/0:29,0:41:78.82:0,79,1212	1/1:10,28:38:78.27:1309,78,0	1/1:5,24:28:66.21:1075,66,0	1/1:3,16:19:37.39:645,37,0	1/1:5,20:25:51.17:832,51,0	1/1:3,26:29:54.15:902,54,0	1/1:3,24:27:45.15:752,45,0	0/0:28,0:28:69.22:0,69,1653	0/0:2,0:20:36.12:0,36,630	0/0:13,0:39:72.21:0,72,1216	0/1:5,9:14:0.60:329,0,1	0/0:17,0:31:72.23:0,72,1283	0/0:9,0:25:69.15:0,69,1030	1/1:13,59:72:99:1709,102,0	0/0:6,0:24:57.19:0,57,941	1/1:2,15:17:24.08:403,24,0	1/1:5,31:36:75.01:1254,75,0	0/0:29,0:29:81.24:0,81,1848	0/0:15,0:37:87.05:0,87,1433	0/0:9,0:34:66.23:0,66,1143	0/0:1,0:3:9.03:0,9,165
chr10	5578639	.	TTAA	T	29974.72	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=2.578;DP=756;FS=6.368;HRun=0;HaplotypeScore=145.8377;InbreedingCoeff=0.9843;MQ=82.78;MQ0=1;MQRankSum=-11.435;QD=42.40;ReadPosRankSum=6.772;VQSLOD=6.1094;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,39:39:99:1736,108,0	1/1:1,12:13:39.13:649,39,0	0/0:24,0:24:72.25:0,72,1560	0/0:25,0:25:69.18:0,69,1422	1/1:3,16:19:39.13:650,39,0	1/1:1,18:19:45.15:749,45,0	1/1:2,35:37:93.32:1538,93,0	1/1:2,28:30:81.26:1317,81,0	1/1:3,30:33:87.30:1440,87,0	1/1:1,41:42:99:1908,117,0	1/1:0,19:19:57.07:857,57,0	1/1:1,29:30:84.29:1399,84,0	1/1:0,26:26:75.26:1238,75,0	1/1:2,29:31:78.18:1238,78,0	1/1:1,29:30:78.27:1299,78,0	1/1:0,35:35:90.27:1470,90,0	1/1:2,23:25:54.18:900,54,0	1/1:1,27:28:72.25:1198,72,0	1/1:3,23:26:66.20:1046,66,0	1/1:3,23:26:66.18:1048,66,0	1/1:4,38:42:99:1651,102,0	1/1:3,27:29:72.16:1122,72,0	1/1:3,17:20:48.12:770,48,0	1/1:2,27:29:75.26:1249,75,0	1/1:0,22:22:63.17:1017,63,0	1/1:2,20:22:60.20:993,60,0	1/1:0,29:29:78.27:1295,78,0	1/1:0,5:5:12.04:200,12,0
chr10	5579319	.	CT	C	19970.37	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=11.704;DP=742;FS=6.301;HRun=1;HaplotypeScore=76.5000;InbreedingCoeff=0.9999;MQ=85.69;MQ0=0;MQRankSum=-5.061;QD=37.54;ReadPosRankSum=1.304;VQSLOD=5.3841;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,119,1825	1/1:0,12:12:33.11:461,33,0	0/0:23,0:23:69.15:0,69,984	0/0:28,0:28:78.24:0,78,1189	1/1:0,23:23:63.17:858,63,0	1/1:0,16:16:39.13:545,39,0	1/1:0,20:20:54.18:755,54,0	1/1:0,21:21:63.11:789,63,0	1/1:1,19:20:51.13:691,51,0	1/1:5,23:28:80.46:1053,80,0	1/1:0,26:26:66.18:898,66,0	1/1:0,24:24:57.19:797,57,0	1/1:0,31:31:90.30:1256,90,0	1/1:0,23:23:57.17:796,57,0	0/0:33,0:33:99:0,99,1504	1/1:0,22:22:57.19:797,57,0	0/0:43,0:43:99:0,129,1971	1/1:0,30:30:84.28:1169,84,0	1/1:1,21:22:63.19:851,63,0	1/1:3,24:27:81.13:1069,81,0	1/1:0,49:49:99:1677,120,0	1/1:1,19:20:57.16:763,57,0	1/1:0,22:22:60.20:830,60,0	1/1:0,31:31:90.30:1258,90,0	0/0:42,0:42:99:0,126,1827	1/1:0,24:24:72.24:1005,72,0	1/1:0,26:26:75.21:1025,75,0	1/1:0,15:15:45.15:629,45,0
chr10	5581694	.	GA	G	9467.93	PASS	AB=0.519;AC=21;AF=0.375;AN=56;BaseQRankSum=6.551;DP=570;FS=0.000;HRun=3;HaplotypeScore=93.7381;InbreedingCoeff=0.9396;MQ=93.78;MQ0=0;MQRankSum=-2.789;QD=39.95;ReadPosRankSum=0.097;VQSLOD=3.8799;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,48:48:99:1972,141,0	0/0:8,0:8:24.08:0,24,384	0/0:26,0:26:72.14:0,72,1085	0/0:25,0:24:65.40:0,65,985	0/0:23,0:23:69.24:0,69,1102	0/0:23,0:23:69.24:0,69,1100	0/0:27,0:27:81.28:0,81,1290	1/1:0,31:31:93.26:1262,93,0	0/0:17,0:17:51.17:0,51,809	0/0:17,0:17:51.17:0,51,812	0/0:9,0:9:27.09:0,27,431	0/0:17,0:17:51.17:0,51,816	0/0:8,0:8:24.08:0,24,384	0/0:19,0:19:57.19:0,57,909	1/1:0,25:25:72.24:1000,72,0	0/1:1,13:14:5.65:503,0,6	0/0:28,0:28:84.29:0,84,1340	0/0:22,0:22:66.22:0,66,1050	1/1:0,14:14:42.10:549,42,0	1/1:0,20:20:60.20:835,60,0	0/0:33,0:33:96.33:0,96,1511	1/1:0,21:21:60.20:839,60,0	0/0:11,0:11:33.11:0,33,527	0/0:20,0:20:59.99:0,60,919	1/1:0,18:18:51.17:713,51,0	1/1:0,14:14:42.14:587,42,0	1/1:0,13:13:36.12:502,36,0	1/1:0,19:19:51.17:706,51,0
chr10	5581755	.	C	CCT	1283.58	PASS	AB=0.849;AC=28;AF=0.519;AN=54;BaseQRankSum=-6.057;DP=534;FS=0.000;HRun=0;HaplotypeScore=108.0985;InbreedingCoeff=0.2831;MQ=70.13;MQ0=21;MQRankSum=3.669;QD=3.59;ReadPosRankSum=-3.725;VQSLOD=0.9406;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:28:27.31:0,27,150	1/1:5,1:6:3.01:44,3,0	0/1:48,0:22:0:0,0,0	0/1:64,0:15:0:0,0,0	1/1:9,2:11:3.01:44,3,0	1/1:16,6:22:9.03:133,9,0	1/1:12,4:17:6.49:89,6,0	./.	1/1:7,5:12:3.01:44,3,0	0/1:12,3:17:25.39:171,0,25	1/1:6,0:6:6:65,6,0	0/1:9,6:17:25.31:38,0,25	1/1:10,5:16:6.01:83,6,0	0/1:10,5:14:1.70:161,0,2	0/0:15,0:16:2.84:0,3,14	0/0:11,0:17:19.79:0,20,96	0/1:21,4:25:14.53:300,0,15	1/1:11,5:16:6.32:59,6,0	0/0:12,0:12:5.68:0,6,28	0/0:19,0:19:25.57:0,26,125	1/1:19,0:18:8.96:69,9,0	0/0:12,0:12:2.18:0,2,22	1/1:8,4:13:3.01:44,3,0	0/1:10,7:18:23.30:72,0,23	0/0:5,0:11:8.52:0,9,42	0/1:12,0:16:29.54:30,0,38	0/0:8,0:13:17.04:0,17,84	0/0:19,0:20:13.79:0,14,69
chr10	5583291	.	T	TC	46.36	PASS	AB=0.827;AC=11;AF=0.204;AN=54;BaseQRankSum=5.921;DP=248;FS=12.911;HRun=0;HaplotypeScore=66.7675;InbreedingCoeff=-0.1151;MQ=73.87;MQ0=0;MQRankSum=-4.687;QD=0.53;ReadPosRankSum=3.340;VQSLOD=0.0952;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:10,1:11:14.77:0,15,351	0/0:1,1:2:2.94:0,3,18	0/0:19,0:14:37.16:0,37,399	0/0:15,0:12:21.22:0,21,250	0/0:6,0:6:3.88:0,4,27	0/0:6,0:6:12.72:0,13,85	0/0:12,1:13:29.23:0,29,234	0/1:12,3:16:43.22:43,0,174	0/0:12,1:12:15.49:0,15,222	0/0:8,0:8:20.92:0,21,143	0/0:2,0:1:2.60:0,3,10	0/0:6,1:7:6.03:0,6,108	0/0:7,0:7:6.71:0,7,49	0/1:9,3:12:24.32:24,0,119	0/1:12,3:15:2.74:3,0,379	1/1:2,1:3:2.84:14,3,0	0/0:12,0:12:33.07:0,33,426	0/1:3,2:5:28.96:29,0,41	0/1:8,1:8:33:33,0,187	0/1:7,1:8:4.59:5,0,194	0/0:16,0:16:36.51:0,37,257	./.	0/0:4,0:4:3.81:0,4,22	0/0:8,1:9:12.64:0,13,116	0/0:8,1:9:11.31:0,11,286	0/1:3,2:5:10.78:11,0,28	0/1:7,1:8:8.42:8,0,79	0/1:5,1:5:4.74:5,0,68
chr10	5583869	.	T	TC	63.46	PASS	AB=0.833;AC=17;AF=0.531;AN=32;BaseQRankSum=-2.121;DP=95;FS=7.416;HRun=0;HaplotypeScore=47.2507;InbreedingCoeff=0.4347;MQ=104.35;MQ0=3;MQRankSum=0.735;QD=3.02;ReadPosRankSum=-2.542;VQSLOD=0.4340;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:25,0:11:18.05:0,18,227	0/0:32,0:19:32.47:0,32,304	0/1:1,0:1:0:0,0,0	./.	./.	1/1:2,0:1:3:26,3,0	1/1:2,0:2:2.97:20,3,0	0/0:2,0:2:3.22:0,3,14	1/1:1,0:1:2.68:11,3,0	./.	./.	1/1:1,2:3:0.82:28,1,0	./.	1/1:2,0:2:0.47:1,0,0	0/1:0,2:2:0:0,0,0	./.	./.	./.	1/1:1,3:4:3.01:33,3,0	./.	0/0:1,0:1:1.82:0,2,5	0/0:1,0:1:2.74:0,3,12	1/1:3,0:3:5.98:47,6,0	0/0:3,0:3:6.19:0,6,20	0/1:1,0:1:0:0,0,0	./.
chr10	5584768	.	C	CA	8650.70	PASS	AB=0.744;AC=36;AF=0.643;AN=56;BaseQRankSum=-13.077;DP=567;FS=4.723;HRun=9;HaplotypeScore=50.2330;InbreedingCoeff=0.8076;MQ=70.94;MQ0=1;MQRankSum=-0.867;QD=24.23;ReadPosRankSum=3.979;VQSLOD=5.5758;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,23:30:31.10:571,31,0	0/1:1,6:7:11.02:118,0,11	0/0:30,0:20:1.66:0,2,155	0/1:18,0:14:10.14:10,0,85	1/1:1,19:20:48.13:530,48,0	1/1:4,23:27:43.13:700,43,0	1/1:0,17:17:42.11:465,42,0	0/0:30,1:31:39.98:0,40,579	1/1:0,19:19:54.13:589,54,0	1/1:1,25:26:72.19:796,72,0	1/1:2,22:24:66.15:715,66,0	1/1:2,8:10:24.06:266,24,0	1/1:1,12:14:10.36:320,10,0	1/1:1,14:15:39.10:429,39,0	1/1:3,10:13:27.07:299,27,0	0/0:9,0:9:23.99:0,24,208	1/1:3,26:29:58.16:863,58,0	1/1:6,18:24:16.14:405,16,0	0/0:30,0:32:85.05:0,85,715	0/0:35,0:35:89.93:0,90,774	1/1:1,11:12:10.04:339,10,0	0/0:12,0:12:35.98:0,36,308	1/1:5,13:18:42.08:452,42,0	1/1:0,8:8:21.06:232,21,0	1/1:3,20:25:30.93:552,31,0	0/0:23,1:24:32.78:0,33,511	0/0:27,0:27:71.96:0,72,625	0/0:10,0:10:29.99:0,30,260
chr10	5586006	.	GGCCCAGCCCAGCCCAGCCCAGCCCA	G	790.45	PASS	AB=1.000;AC=7;AF=0.250;AN=28;BaseQRankSum=-1.523;DP=279;FS=3.220;HRun=0;HaplotypeScore=142.4230;InbreedingCoeff=0.3486;MQ=107.12;MQ0=14;MQRankSum=-1.649;QD=8.07;ReadPosRankSum=2.905;VQSLOD=2.2947;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,12:24:2.97:56,3,0	./.	0/0:62,0:26:11.44:0,11,38	0/1:54,0:32:11.01:21,0,11	./.	0/0:8,0:8:3.01:0,3,109	0/0:10,0:10:4.09:0,4,12	0/0:5,0:5:6.01:0,6,83	0/0:5,0:6:3.01:0,3,238	./.	./.	./.	./.	0/0:8,0:8:9.01:0,9,298	1/1:12,0:12:27.07:687,27,0	./.	0/0:9,0:9:3.48:0,3,48	./.	./.	./.	0/0:14,0:14:12.01:0,12,256	0/0:4,0:4:3.01:0,3,187	0/0:4,0:4:3.01:0,3,50	./.	1/1:4,4:8:3.01:131,3,0	./.	./.	./.
chr10	5586162	.	GC	G	2803.55	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=7.361;DP=452;FS=2.150;HRun=6;HaplotypeScore=65.5729;InbreedingCoeff=0.9742;MQ=94.37;MQ0=1;MQRankSum=-3.450;QD=22.79;ReadPosRankSum=2.691;VQSLOD=3.1843;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,24:28:57.14:612,57,0	0/0:5,0:5:8.82:0,9,118	0/0:26,0:26:57.20:0,57,634	0/0:23,0:22:48.11:0,48,578	0/0:16,0:16:24.08:0,24,314	0/0:11,0:11:30.10:0,30,391	0/0:27,0:27:75.21:0,75,968	1/1:2,19:21:54.09:556,54,0	0/0:15,0:15:45.15:0,45,588	0/0:14,0:12:36.11:0,36,461	0/0:10,0:10:18.06:0,18,237	0/0:9,0:9:21.07:0,21,276	0/0:12,0:12:33.11:0,33,433	0/0:14,0:14:42.14:0,42,552	1/1:2,19:21:54.13:580,54,0	0/0:8,0:8:18.06:0,18,234	0/0:25,0:25:75.22:0,75,969	0/0:13,0:13:39.13:0,39,512	0/0:15,0:15:42.14:0,42,549	0/0:7,0:7:21.07:0,21,276	0/0:33,0:33:87.25:0,87,1105	0/0:8,0:8:12.04:0,12,157	0/0:10,0:9:15.05:0,15,196	0/0:28,0:28:81.26:0,81,1066	1/1:1,18:19:42.10:449,42,0	1/1:1,12:12:33.08:354,33,0	1/1:1,12:13:21.05:226,21,0	1/1:0,8:8:21.05:226,21,0
chr10	5586413	.	C	CTCTT	5339.05	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=-0.331;DP=483;FS=5.461;HRun=0;HaplotypeScore=150.9287;InbreedingCoeff=0.7305;MQ=61.07;MQ0=2;MQRankSum=-4.290;QD=25.42;ReadPosRankSum=0.936;VQSLOD=4.5937;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:27:4.43:4,0,256	0/0:7,0:7:14.99:0,15,183	0/0:25,0:20:30.10:0,30,485	0/1:15,0:11:7.70:8,0,213	0/0:21,0:20:48.05:0,48,721	0/0:27,0:27:60.18:0,60,886	0/0:16,0:15:30.10:0,30,466	1/1:20,1:21:27.09:533,27,0	0/0:26,0:25:63.21:0,63,1041	0/0:19,0:18:45.09:0,45,655	0/0:18,0:17:39.06:0,39,528	0/0:13,0:13:10.95:0,11,179	0/0:17,0:17:39.11:0,39,597	0/0:10,0:9:21.04:0,21,256	1/1:16,0:16:5.09:329,5,0	1/1:10,3:13:39.13:920,39,0	0/0:16,0:14:21:0,21,307	0/0:14,0:14:24:0,24,334	1/1:5,13:16:39.13:817,39,0	1/1:6,7:13:24.04:471,24,0	0/0:13,0:12:9.03:0,9,139	1/1:12,0:12:15:270,15,0	0/0:15,0:15:39.11:0,39,519	0/0:16,0:16:1.86:0,2,177	0/1:16,0:16:62.89:63,0,171	1/1:28,0:27:25.76:902,26,0	1/1:23,0:23:37.76:887,38,0	1/1:8,0:8:14.76:135,15,0
chr10	5586425	.	TTCTC	T	3975.62	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=3.779;DP=459;FS=4.580;HRun=0;HaplotypeScore=160.7718;InbreedingCoeff=0.5279;MQ=47.95;MQ0=4;MQRankSum=-5.196;QD=19.58;ReadPosRankSum=-0.456;VQSLOD=3.2818;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:25:52.57:53,0,229	0/0:7,0:7:11.41:0,11,76	0/0:18,0:13:32.70:0,33,668	0/1:12,0:8:6.44:6,0,331	0/0:27,0:26:20.57:0,21,456	0/0:25,0:25:49.41:0,49,464	0/0:17,0:15:25.84:0,26,428	1/1:7,4:14:24.32:382,24,0	0/0:27,0:26:38.89:0,39,380	0/0:17,0:16:14.15:0,14,596	0/0:18,0:17:24.12:0,24,330	0/0:12,0:12:0.79:0,1,90	0/0:17,0:17:19.30:0,19,185	0/0:12,0:11:13.49:0,13,202	1/1:5,7:12:8.88:413,9,0	1/1:5,8:13:38.96:516,39,0	0/0:15,0:13:5.01:0,5,184	0/0:16,0:15:23.93:0,24,193	0/1:20,0:16:63.64:346,0,64	1/1:9,2:11:23.91:267,24,0	0/0:11,0:10:6.45:0,6,94	1/1:0,6:6:14.99:176,15,0	0/0:17,0:17:5.66:0,6,144	0/1:18,0:18:23.48:23,0,111	0/1:15,0:14:62.87:63,0,200	1/1:17,9:26:57.77:893,58,0	1/1:13,7:23:43.46:552,43,0	1/1:0,6:7:12.14:285,12,0
chr10	5586437	.	CTCTT	C	8668.63	PASS	AB=0.861;AC=38;AF=0.679;AN=56;BaseQRankSum=-3.492;DP=439;FS=1.077;HRun=0;HaplotypeScore=148.5650;InbreedingCoeff=0.1269;MQ=43.86;MQ0=8;MQRankSum=0.369;QD=23.37;ReadPosRankSum=4.645;VQSLOD=4.5079;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:20:39.43:0,39,538	1/1:1,5:6:12.04:215,12,0	0/0:12,0:9:8.08:0,8,165	0/1:8,0:5:8.49:8,0,51	1/1:11,16:26:51.15:837,51,0	1/1:11,13:23:54.17:897,54,0	1/1:7,6:11:18.01:234,18,0	0/1:17,0:15:60:63,0,60	1/1:10,17:26:60.21:1073,60,0	1/1:13,5:16:30.07:465,30,0	1/1:9,9:17:37.92:576,38,0	1/1:1,9:10:15.03:238,15,0	1/1:5,11:16:42.13:692,42,0	1/1:3,7:9:18.52:288,19,0	0/1:15,0:15:35.89:184,0,36	0/1:13,0:13:0.03:167,0,0	0/1:10,3:16:11.46:247,0,11	0/1:2,11:12:25.18:300,0,25	0/0:17,0:13:0.54:0,1,81	0/1:6,0:6:15.55:19,0,16	1/1:3,8:10:8.95:124,9,0	1/1:6,0:6:4.78:25,5,0	1/1:2,14:16:36.12:628,36,0	0/1:4,11:15:4.15:97,0,4	0/0:17,0:16:36.90:0,37,445	0/1:18,9:26:85.43:688,0,85	0/1:21,4:25:21.52:346,0,22	1/1:4,6:8:0.53:256,1,0
chr10	5586467	.	CTT	C	4883.90	PASS	AB=0.989;AC=37;AF=0.712;AN=52;BaseQRankSum=-5.153;DP=457;FS=2.357;HRun=3;HaplotypeScore=168.7676;InbreedingCoeff=0.1558;MQ=31.86;MQ0=27;MQRankSum=-1.816;QD=11.83;ReadPosRankSum=0.579;VQSLOD=1.6158;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:21:15.27:108,0,15	0/0:9,0:8:11.80:0,12,107	./.	./.	1/1:11,13:23:38.95:442,39,0	1/1:18,10:27:15.68:478,16,0	1/1:6,6:10:14.70:191,15,0	0/1:19,0:14:5.21:5,0,91	1/1:11,16:25:42.17:511,42,0	1/1:14,8:19:26.65:484,27,0	1/1:19,4:21:6.11:217,6,0	1/1:5,4:9:12.02:134,12,0	1/1:10,7:16:33.34:355,33,0	1/1:6,11:15:27.54:352,28,0	1/1:22,0:19:8.53:177,9,0	0/1:11,0:11:14.29:111,0,14	0/1:33,0:27:20.24:20,0,303	0/1:15,1:13:73.18:112,0,73	0/1:4,0:4:11.44:33,0,11	0/1:4,0:4:13.94:14,0,25	1/1:6,1:5:4.78:64,5,0	1/1:11,0:10:24.32:201,24,0	1/1:13,15:27:48.18:574,48,0	1/1:11,2:11:11.46:125,11,0	0/1:19,0:19:6.60:160,0,7	0/1:24,1:22:15.97:16,0,97	0/0:20,0:17:22.89:0,23,179	0/0:15,0:9:15.57:0,16,73
chr10	5586468	.	T	TC	455.58	PASS	AB=0.977;AC=15;AF=0.288;AN=52;BaseQRankSum=-4.427;DP=453;FS=3.656;HRun=1;HaplotypeScore=177.2805;InbreedingCoeff=0.2413;MQ=31.88;MQ0=27;MQRankSum=-2.664;QD=2.04;ReadPosRankSum=3.923;VQSLOD=-0.3643;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:21:31.99:0,32,216	0/0:9,0:8:17.53:0,18,107	./.	./.	0/1:23,1:23:31.42:43,0,31	0/1:27,0:27:41.78:60,0,42	1/1:11,1:10:12:52,12,0	0/0:19,0:14:30.05:0,30,329	0/1:24,1:23:0.51:91,0,1	0/1:22,1:20:32.63:109,0,33	0/1:22,0:20:28.12:28,0,69	0/1:9,0:9:4.06:16,0,4	0/1:16,1:16:27.49:27,0,67	1/1:17,0:15:19.59:78,20,0	0/0:22,0:19:43.19:0,43,304	0/0:11,0:11:30.33:0,30,272	0/0:32,0:26:15.71:0,16,335	0/0:16,0:13:7.68:0,8,128	0/0:4,0:4:8.80:0,9,103	0/0:4,0:4:11.99:0,12,137	0/1:7,0:5:5.12:5,0,9	0/0:11,0:10:29.08:0,29,255	1/1:24,3:26:11.42:99,11,0	0/1:12,0:10:10.42:10,0,17	0/0:19,0:19:38.64:0,39,319	0/0:25,0:22:47.63:0,48,506	0/0:20,0:17:43.89:0,44,417	0/0:16,0:10:23.01:0,23,179
chr10	5586469	.	T	TC	582.48	PASS	AB=0.985;AC=17;AF=0.327;AN=52;BaseQRankSum=-4.855;DP=456;FS=5.109;HRun=0;HaplotypeScore=177.5913;InbreedingCoeff=0.2329;MQ=31.96;MQ0=27;MQRankSum=-2.950;QD=2.42;ReadPosRankSum=1.789;VQSLOD=2.3341;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:21:6.33:0,6,120	0/0:9,0:8:17.52:0,18,107	./.	./.	0/1:23,1:23:23.68:57,0,24	0/1:29,0:28:31.85:89,0,32	1/1:11,1:10:12.31:53,12,0	0/0:19,0:14:28.16:0,28,288	1/1:24,1:23:10.69:107,11,0	0/1:22,1:20:20.29:136,0,20	0/1:22,0:20:31.25:31,0,58	0/1:9,0:9:3.52:16,0,4	0/1:16,1:16:27.89:28,0,69	1/1:18,0:16:19.76:78,20,0	0/0:22,0:19:33.44:0,33,183	0/0:11,0:11:18.82:0,19,124	0/0:32,0:26:19.69:0,20,323	0/1:16,0:13:10.66:11,0,117	0/0:4,0:5:8.52:0,9,70	0/0:4,0:4:11.88:0,12,104	0/1:7,0:5:5.12:5,0,9	0/0:11,0:10:13.36:0,13,123	1/1:24,3:26:15.07:130,15,0	0/1:12,0:10:10.56:11,0,15	0/0:19,0:19:37.40:0,37,230	0/0:25,0:22:11.26:0,11,322	0/0:20,0:17:43.86:0,44,395	0/0:16,0:10:25.46:0,25,165
chr10	5586471	.	C	CTT	4283.12	PASS	AB=0.989;AC=37;AF=0.712;AN=52;BaseQRankSum=6.951;DP=455;FS=1.112;HRun=3;HaplotypeScore=170.6426;InbreedingCoeff=0.0827;MQ=32.07;MQ0=27;MQRankSum=-7.450;QD=10.73;ReadPosRankSum=6.354;VQSLOD=1.4757;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:23:32.53:298,33,0	0/0:9,0:8:18.06:0,18,255	./.	./.	0/1:24,0:23:52.11:183,0,52	0/1:27,2:28:49.52:324,0,50	1/1:12,0:10:14.54:110,15,0	1/1:18,0:13:21.98:93,22,0	0/1:24,1:23:5.30:261,0,5	0/1:23,0:20:57.20:221,0,57	0/1:23,0:21:84.34:84,0,127	0/1:10,0:10:32.82:49,0,33	0/1:17,0:16:56.40:122,0,56	1/1:18,0:16:5.46:163,5,0	1/1:19,0:18:36.91:361,37,0	1/1:11,0:11:19.29:299,19,0	0/0:32,0:26:44.84:0,45,494	0/0:15,0:12:3.09:0,3,153	1/1:5,0:5:3.83:57,4,0	1/1:4,0:4:9.44:85,9,0	0/1:7,0:5:16.52:17,0,18	1/1:11,0:10:30.07:372,30,0	1/1:25,2:26:20.77:326,21,0	0/1:11,0:9:8.98:92,0,9	1/1:18,0:18:5.22:215,5,0	1/1:25,0:22:54.88:242,55,0	1/1:20,0:17:38.23:184,38,0	1/1:16,0:10:25.05:124,25,0
chr10	5586472	.	TC	T	800.32	PASS	AB=0.839;AC=13;AF=0.250;AN=52;BaseQRankSum=8.262;DP=451;FS=9.547;HRun=1;HaplotypeScore=172.9228;InbreedingCoeff=0.0884;MQ=32.20;MQ0=27;MQRankSum=-1.731;QD=4.91;ReadPosRankSum=3.317;VQSLOD=-0.0076;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:22:22.80:56,0,23	0/0:9,0:8:18.06:0,18,279	./.	./.	0/0:24,0:23:40.83:0,41,325	0/0:28,1:28:39.19:0,39,384	0/0:12,0:10:14.82:0,15,78	0/0:18,0:13:22.58:0,23,106	0/0:25,0:23:28.03:0,28,235	0/0:23,0:20:56.50:0,57,507	0/0:22,0:20:38.57:0,39,421	0/0:10,0:10:14.67:0,15,114	0/0:17,0:16:38.33:0,38,325	0/0:18,0:16:27.34:0,27,145	0/1:19,3:20:7.10:129,0,7	0/1:6,5:11:49.67:63,0,50	0/0:32,0:26:44.06:0,44,635	0/0:15,0:12:23.38:0,23,294	0/1:5,0:5:5.76:6,0,27	0/1:2,2:4:7.82:10,0,8	0/0:7,0:5:9.77:0,10,74	1/1:8,3:10:25.14:123,25,0	0/0:27,0:26:34.61:0,35,280	0/1:10,1:9:7.73:8,0,56	0/1:14,4:18:14.81:88,0,15	0/1:18,7:22:20.85:202,0,21	0/1:12,4:13:54.99:55,0,63	1/1:10,6:10:2.66:211,3,0
chr10	5586474	.	TC	T	784.72	PASS	AB=0.932;AC=14;AF=0.269;AN=52;BaseQRankSum=7.273;DP=460;FS=5.928;HRun=1;HaplotypeScore=177.4457;InbreedingCoeff=0.0909;MQ=32.26;MQ0=27;MQRankSum=-4.165;QD=4.36;ReadPosRankSum=2.554;VQSLOD=0.4956;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:26:23.31:55,0,23	0/0:10,0:9:21.06:0,21,304	./.	./.	0/0:23,0:23:40.79:0,41,320	0/0:28,1:28:41.11:0,41,389	0/0:14,0:12:17.67:0,18,92	0/0:18,0:13:22.14:0,22,113	0/0:25,0:23:25.01:0,25,205	0/0:23,0:20:56.51:0,57,505	0/0:22,0:21:41.58:0,42,459	0/1:10,0:10:2.34:2,0,86	0/0:17,0:16:35.25:0,35,284	0/0:19,0:17:9.44:0,9,119	1/1:23,0:20:6.76:129,7,0	0/1:6,5:11:51.40:59,0,51	0/0:32,0:26:45.48:0,45,634	0/0:15,0:12:32.70:0,33,352	0/1:5,0:5:5.16:5,0,28	0/1:2,2:4:5.71:27,0,6	0/0:6,0:4:6.77:0,7,54	1/1:8,3:10:24.96:119,25,0	0/0:27,0:26:34.60:0,35,279	0/1:12,0:10:7.86:8,0,57	0/1:18,0:18:12.23:71,0,12	0/1:24,1:22:33.57:230,0,34	0/1:17,0:14:54.26:54,0,78	0/1:16,0:10:5.52:179,0,6
chr10	5586475	.	C	CTT	5740.63	PASS	AB=1.000;AC=39;AF=0.750;AN=52;BaseQRankSum=5.798;DP=474;FS=3.447;HRun=1;HaplotypeScore=178.6714;InbreedingCoeff=0.1101;MQ=32.59;MQ0=27;MQRankSum=-7.727;QD=13.32;ReadPosRankSum=4.453;VQSLOD=2.2290;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,13:25:28.97:395,29,0	0/0:10,0:9:21.06:0,21,282	./.	./.	0/1:23,0:23:54.04:181,0,54	0/1:30,0:29:38.80:326,0,39	1/1:16,0:14:20.01:136,20,0	1/1:21,0:16:37.71:242,38,0	1/1:25,0:23:16.91:298,17,0	0/1:23,0:20:56.63:225,0,57	0/1:22,0:21:87.50:88,0,134	0/1:10,0:10:7.02:94,0,7	0/1:17,0:16:2.79:181,0,3	1/1:19,0:17:38.78:322,39,0	1/1:20,1:21:50.99:600,51,0	1/1:11,0:11:28.90:298,29,0	0/0:33,0:27:29.56:0,30,458	0/1:14,0:11:54.25:54,0,155	1/1:7,0:7:17.82:136,18,0	1/1:4,0:4:11.95:105,12,0	0/1:7,0:5:14.82:28,0,15	1/1:11,0:10:30.07:379,30,0	1/1:27,0:26:21.20:328,21,0	0/1:12,0:10:6.20:101,0,6	1/1:13,2:19:35.96:444,36,0	1/1:27,1:25:62.63:507,63,0	1/1:18,0:15:33.35:158,33,0	1/1:16,0:10:24.73:117,25,0
chr10	5586476	.	TC	T	933	PASS	AB=0.883;AC=17;AF=0.327;AN=52;BaseQRankSum=9.082;DP=473;FS=11.643;HRun=1;HaplotypeScore=179.0079;InbreedingCoeff=0.4764;MQ=32.65;MQ0=27;MQRankSum=-2.842;QD=4.96;ReadPosRankSum=4.688;VQSLOD=-0.6194;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:18,6:22:2.15:156,2,0	0/0:10,0:9:21.07:0,21,317	./.	./.	0/0:23,0:23:40.74:0,41,309	0/0:30,0:29:43.32:0,43,375	0/0:16,0:14:20.48:0,20,106	0/1:19,2:16:37.12:37,0,109	0/0:25,0:23:25.93:0,26,210	0/0:23,0:20:56.50:0,56,504	0/0:22,0:21:37.32:0,37,427	0/0:10,0:10:17.57:0,18,136	0/0:17,0:16:33.59:0,34,265	0/0:19,0:17:34.76:0,35,191	0/1:11,12:20:6.54:245,0,7	0/1:9,2:11:21.30:78,0,21	0/0:33,0:27:38.56:0,39,638	0/0:14,0:11:29.57:0,30,303	0/0:7,1:8:1.84:0,2,86	0/1:4,0:4:4.06:25,0,4	0/0:7,0:5:8.65:0,9,46	1/1:5,6:10:8.68:91,9,0	0/0:27,0:27:37.46:0,37,291	0/1:12,0:10:6.93:7,0,55	1/1:9,11:20:35.46:275,35,0	1/1:28,0:25:1.88:65,2,0	1/1:18,0:15:16.12:82,16,0	1/1:16,0:10:8.36:41,8,0
chr10	5586478	.	TC	T	593.90	PASS	AB=0.934;AC=16;AF=0.308;AN=52;BaseQRankSum=9.257;DP=466;FS=5.275;HRun=1;HaplotypeScore=176.7802;InbreedingCoeff=0.4296;MQ=32.57;MQ0=27;MQRankSum=-3.842;QD=3.19;ReadPosRankSum=4.175;VQSLOD=0.3230;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:22:50.82:59,0,51	0/0:10,0:9:21.07:0,21,311	./.	./.	0/0:22,0:22:37.72:0,38,266	0/0:30,0:29:24.28:0,24,336	0/0:15,0:13:20.25:0,20,122	0/1:17,2:16:17.30:17,0,114	0/0:26,0:24:25.75:0,26,209	0/0:23,0:20:56.49:0,56,500	0/0:21,0:20:35.57:0,36,390	0/0:9,0:9:14.42:0,14,78	0/0:16,0:15:30.11:0,30,201	0/0:20,0:18:28.61:0,29,144	0/1:19,4:20:2.75:147,0,3	0/1:9,2:11:7.63:82,0,8	0/0:31,0:25:40.85:0,41,631	0/0:14,0:11:29.47:0,29,253	0/0:7,1:8:1.13:0,1,89	0/1:4,0:4:6.72:9,0,7	0/0:7,0:5:8.47:0,8,41	1/1:5,6:10:7.71:92,8,0	0/0:28,0:27:37.33:0,37,281	0/1:11,0:9:10.62:11,0,22	1/1:16,4:20:31.67:170,32,0	1/1:29,0:26:3.35:74,3,0	1/1:17,1:15:13.65:62,14,0	1/1:16,0:10:8:38,8,0
chr10	5586479	.	CT	C	689.96	PASS	AB=0.927;AC=10;AF=0.192;AN=52;BaseQRankSum=6.606;DP=479;FS=0.000;HRun=1;HaplotypeScore=179.3340;InbreedingCoeff=0.1867;MQ=32.67;MQ0=28;MQRankSum=-2.630;QD=4.06;ReadPosRankSum=4.820;VQSLOD=0.3375;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:21,6:25:99:110,0,156	0/0:10,0:9:21.07:0,21,316	./.	./.	0/0:22,0:22:37.77:0,38,276	0/0:30,0:29:57.16:0,57,415	0/0:16,0:13:23.80:0,24,177	0/1:25,0:22:72.14:72,0,178	0/0:27,0:25:42.92:0,43,270	0/0:23,0:20:56.49:0,56,496	0/0:21,0:20:35.55:0,36,391	0/0:9,0:9:14.72:0,15,122	0/0:16,0:15:32.28:0,32,274	0/0:20,0:18:40.08:0,40,272	0/1:15,8:20:88.18:152,0,88	0/0:12,0:12:8.95:0,9,116	0/0:31,0:25:47.94:0,48,671	0/0:13,0:10:26.86:0,27,290	0/0:8,0:8:14.50:0,15,150	0/0:5,0:5:2.84:0,3,30	0/0:7,0:5:8.89:0,9,86	0/1:11,0:10:1.94:2,0,5	0/0:28,0:27:47.62:0,48,311	0/0:11,0:9:6.25:0,6,42	1/1:13,7:20:4.86:162,5,0	0/1:29,0:26:87.83:88,0,91	1/1:19,0:16:6.89:183,7,0	0/1:16,0:10:13.02:58,0,13
chr10	5586480	.	TC	T	1382.97	PASS	AB=0.925;AC=13;AF=0.250;AN=52;BaseQRankSum=8.556;DP=481;FS=2.954;HRun=1;HaplotypeScore=173.6616;InbreedingCoeff=0.2097;MQ=32.66;MQ0=30;MQRankSum=-1.794;QD=7.36;ReadPosRankSum=4.306;VQSLOD=1.2410;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:25:42.71:43,0,135	0/0:10,0:9:21.07:0,21,311	./.	./.	0/0:22,0:22:32.17:0,32,218	0/0:28,0:27:51.09:0,51,282	0/0:16,0:13:23.29:0,23,179	0/1:19,6:22:99:228,0,102	0/0:27,0:25:41.34:0,41,237	0/0:23,0:20:55.58:0,56,427	0/0:22,0:21:38.03:0,38,377	0/0:9,0:9:14.46:0,14,116	0/0:16,0:15:31.56:0,32,242	0/0:20,0:18:39.07:0,39,277	0/1:23,0:20:75.97:112,0,76	0/1:12,0:12:11.96:12,0,89	0/0:32,0:26:48.07:0,48,650	0/0:13,0:10:23.73:0,24,246	0/0:9,0:7:9.63:0,10,135	0/1:5,0:5:7.78:8,0,75	0/0:7,0:5:8.76:0,9,81	1/1:11,0:10:2.27:23,2,0	0/0:28,0:27:43.57:0,44,232	0/0:11,0:9:5.28:0,5,35	0/1:20,0:20:29.59:119,0,30	0/1:15,1:27:30.06:385,0,30	1/1:6,13:16:34.79:410,35,0	1/1:12,4:10:21.50:201,21,0
chr10	5586481	.	CTT	C	4118.39	PASS	AB=0.955;AC=25;AF=0.481;AN=52;BaseQRankSum=3.972;DP=492;FS=0.894;HRun=3;HaplotypeScore=169.7639;InbreedingCoeff=-0.4505;MQ=33.05;MQ0=31;MQRankSum=-6.290;QD=9.95;ReadPosRankSum=7.187;VQSLOD=0.1490;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:26:82.21:121,0,82	0/0:10,0:9:20.98:0,21,209	./.	./.	0/1:20,2:22:66.24:353,0,66	0/1:27,1:27:38.24:388,0,38	0/1:16,0:13:50.85:175,0,51	0/1:30,0:26:6.23:6,0,46	0/1:26,2:26:47.23:411,0,47	0/1:19,4:20:54.59:454,0,55	0/1:16,6:21:99:133,0,223	0/1:9,0:9:54.51:103,0,55	0/1:14,2:15:78.76:223,0,79	0/1:20,1:19:99:279,0,154	0/1:24,0:21:42.36:176,0,42	1/1:10,2:12:2.38:214,2,0	0/0:33,0:27:46.95:0,47,561	0/1:13,0:10:22.95:23,0,163	0/1:8,0:6:12.24:24,0,12	1/1:5,0:5:13.32:76,13,0	0/1:6,1:5:32.80:33,0,44	1/1:11,0:10:26.59:153,27,0	0/1:27,1:27:3.23:482,0,3	0/1:13,0:11:44.22:84,0,44	0/1:20,0:20:9.62:159,0,10	0/1:30,0:27:48.41:48,0,135	0/0:19,0:16:11.14:0,11,110	0/0:16,0:10:18.81:0,19,90
chr10	5586899	.	TG	T	3907.81	PASS	AB=0.911;AC=40;AF=0.741;AN=54;BaseQRankSum=0.264;DP=402;FS=5.563;HRun=11;HaplotypeScore=52.7835;InbreedingCoeff=0.5438;MQ=77.77;MQ0=0;MQRankSum=-2.562;QD=11.70;ReadPosRankSum=3.790;VQSLOD=3.0492;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,18:23:55.90:442,56,0	1/1:2,1:3:2.98:25,3,0	0/0:14,0:14:20.59:0,21,202	0/1:13,1:14:18.71:19,0,118	1/1:1,8:9:17.97:148,18,0	1/1:4,7:13:21.58:159,22,0	1/1:8,12:22:34.02:258,34,0	0/0:16,0:16:18.04:0,18,185	1/1:6,13:19:38.92:320,39,0	1/1:12,2:15:7.73:55,8,0	1/1:7,11:17:26.92:221,27,0	1/1:7,11:18:32.92:271,33,0	1/1:3,11:15:25.95:198,26,0	1/1:1,10:11:29.97:246,30,0	1/1:3,9:13:26.01:203,26,0	0/0:5,0:9:8.89:0,9,79	1/1:4,0:29:44.81:129,45,0	1/1:4,5:10:20.01:153,20,0	0/1:8,0:8:2.05:2,0,17	0/0:8,0:8:5.99:0,6,49	1/1:9,12:21:32.94:271,33,0	./.	1/1:5,11:17:30.37:244,30,0	1/1:6,15:21:44.92:369,45,0	1/1:6,5:11:14.97:123,15,0	0/0:14,0:14:3:0,3,26	0/1:18,2:19:37.17:37,0,230	0/1:3,1:4:15.62:16,0,55
chr10	5587464	.	CT	C	1220.87	PASS	AB=1.000;AC=22;AF=0.393;AN=56;BaseQRankSum=14.144;DP=381;FS=0.843;HRun=1;HaplotypeScore=63.3547;InbreedingCoeff=0.4658;MQ=71.00;MQ0=1;MQRankSum=0.705;QD=4.77;ReadPosRankSum=7.032;VQSLOD=0.4117;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:51.10:0,51,637	0/1:3,0:3:8:8,0,14	0/0:4,0:4:9.03:0,9,120	0/0:5,0:5:14.08:0,14,186	0/1:6,0:6:11.57:23,0,12	1/1:2,1:3:7.60:45,8,0	0/1:39,0:39:21.13:143,0,21	0/0:7,0:7:13.02:0,13,239	1/1:10,0:10:24.37:103,24,0	0/1:8,0:8:5.77:6,0,15	1/1:3,0:3:4.59:16,5,0	0/1:25,0:25:17.86:141,0,18	1/1:13,2:15:10.30:144,10,0	1/1:19,0:19:20.35:160,20,0	0/0:10,0:10:30.10:0,30,442	0/0:5,0:5:11.93:0,12,151	0/0:21,0:21:57.13:0,57,785	1/1:22,0:22:31.33:152,31,0	0/0:18,0:18:54.16:0,54,744	0/0:3,0:3:2.99:0,3,45	1/1:67,1:67:46.38:338,46,0	0/0:10,0:10:30.08:0,30,426	1/1:3,0:3:6.66:22,7,0	0/1:32,0:32:35.14:112,0,35	0/0:7,0:7:21.07:0,21,313	0/0:10,0:10:26.98:0,27,336	0/0:7,0:7:20.99:0,21,263	0/0:1,0:1:3.01:0,3,41
chr10	5587465	.	TC	T	6411.37	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=7.284;DP=385;FS=1.979;HRun=6;HaplotypeScore=47.8683;InbreedingCoeff=0.8792;MQ=70.90;MQ0=1;MQRankSum=-0.969;QD=25.14;ReadPosRankSum=5.394;VQSLOD=4.2033;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:36.10:0,36,459	1/1:0,2:2:6.02:64,6,0	0/0:4,0:4:9.02:0,9,106	0/0:5,0:5:14.08:0,14,164	1/1:0,6:6:9.02:97,9,0	1/1:3,2:5:9.02:96,9,0	1/1:4,35:39:87.22:935,87,0	0/0:7,0:7:15.03:0,15,169	1/1:0,10:10:30.08:322,30,0	1/1:0,8:8:15.02:161,15,0	1/1:0,3:3:6.02:64,6,0	1/1:3,22:25:60.15:644,60,0	1/1:3,12:15:39.10:417,39,0	1/1:1,18:19:51.60:548,52,0	0/0:10,0:10:30.10:0,30,395	0/0:5,0:5:15.04:0,15,183	0/0:21,0:21:57.16:0,57,721	1/1:1,21:22:63.16:677,63,0	0/0:22,0:22:57.14:0,57,704	0/0:3,0:3:2.99:0,3,39	1/1:4,63:66:99:1579,147,0	0/0:11,0:11:33.09:0,33,418	1/1:0,3:3:9.02:97,9,0	1/1:3,28:31:66.16:709,66,0	0/0:7,0:7:21.07:0,21,276	0/0:10,0:10:21.06:0,21,262	0/0:7,0:7:15.05:0,15,195	0/0:1,0:1:2.97:0,3,20
chr10	5588750	.	TC	T	9241.09	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-2.098;DP=407;FS=4.666;HRun=7;HaplotypeScore=63.3654;InbreedingCoeff=0.8629;MQ=78.64;MQ0=1;MQRankSum=-7.042;QD=24.38;ReadPosRankSum=4.963;VQSLOD=5.1428;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,12:15:36.08:367,36,0	1/1:0,2:2:6.01:61,6,0	0/0:15,0:13:27:0,27,308	0/0:13,0:13:29.66:0,30,333	1/1:0,10:10:24.05:245,24,0	1/1:3,8:11:24.05:240,24,0	1/1:4,20:24:53.62:550,54,0	1/1:5,6:11:15.03:152,15,0	1/1:0,16:16:38.98:397,39,0	1/1:0,13:13:39.08:391,39,0	1/1:1,4:5:12.03:122,12,0	1/1:0,17:17:39.06:397,39,0	1/1:0,9:9:24.05:244,24,0	1/1:1,13:14:27.06:275,27,0	1/1:2,4:6:9.02:92,9,0	1/1:1,10:11:27.06:275,27,0	1/1:3,34:37:93.21:948,93,0	1/1:1,26:27:75.17:764,75,0	1/1:1,8:9:21.04:214,21,0	1/1:0,5:5:9.02:92,9,0	1/1:6,54:59:99:1434,140,0	1/1:2,8:10:24.05:245,24,0	1/1:1,9:10:24.05:245,24,0	1/1:3,18:21:51.11:520,51,0	1/1:2,8:10:24.05:245,24,0	1/1:0,11:11:33.06:329,33,0	1/1:1,7:8:18.04:183,18,0	1/1:0,7:7:21.05:214,21,0
chr10	5591795	.	AAGGG	A	2201.38	PASS	AB=1.000;AC=36;AF=0.783;AN=46;BaseQRankSum=3.677;DP=269;FS=1.982;HRun=0;HaplotypeScore=52.8915;InbreedingCoeff=0.4131;MQ=81.10;MQ0=5;MQRankSum=-0.136;QD=10.90;ReadPosRankSum=1.710;VQSLOD=2.5086;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:22:41.86:0,42,803	1/1:2,0:2:3.01:49,3,0	0/0:16,0:13:7.76:0,8,48	0/1:14,0:12:0:0,0,0	1/1:2,3:5:6.02:97,6,0	1/1:2,7:9:6.02:97,6,0	1/1:6,8:14:4.57:53,5,0	1/1:16,0:16:4.26:94,4,0	1/1:4,3:7:9.03:146,9,0	1/1:7,7:14:21.07:334,21,0	./.	1/1:3,8:11:3.48:50,3,0	1/1:6,4:10:6.02:97,6,0	1/1:5,4:9:3.01:49,3,0	0/0:2,0:2:3.01:0,3,36	./.	0/1:16,0:16:46.73:47,0,377	1/1:0,5:5:3.01:49,3,0	./.	./.	1/1:4,4:7:3.01:49,3,0	./.	1/1:3,7:10:6.02:98,6,0	1/1:12,1:12:6.02:92,6,0	0/0:6,0:6:6.02:0,6,110	1/1:18,0:18:27.08:414,27,0	1/1:15,0:15:21.07:330,21,0	1/1:6,0:4:12.04:191,12,0
chr10	5591824	.	GGAGA	G	159.55	PASS	AB=0.975;AC=10;AF=0.500;AN=20;BaseQRankSum=1.270;DP=308;FS=0.000;HRun=0;HaplotypeScore=67.8394;InbreedingCoeff=0.2073;MQ=46.17;MQ0=41;MQRankSum=1.588;QD=1.95;ReadPosRankSum=-0.212;VQSLOD=1.1159;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:25:5.91:0,6,63	./.	./.	./.	./.	./.	1/1:17,0:18:2.97:20,3,0	0/0:22,0:21:2.49:0,2,6	1/1:9,0:9:9.02:117,9,0	./.	./.	./.	./.	./.	1/1:6,0:5:3.01:30,3,0	./.	1/1:16,4:19:1.68:43,2,0	0/1:9,0:9:14.64:33,0,15	./.	0/0:3,0:3:0:0,0,0	./.	./.	./.	./.	0/0:7,0:6:0:0,0,0	0/1:18,0:16:1.50:1,0,13	./.	./.
chr10	5593724	.	T	TTCTCTCTCTCTC	5111.79	PASS	AB=1.000;AC=35;AF=0.673;AN=52;BaseQRankSum=-3.202;DP=619;FS=21.133;HRun=0;HaplotypeScore=244.9440;InbreedingCoeff=0.6943;MQ=58.27;MQ0=12;MQRankSum=-2.338;QD=14.24;ReadPosRankSum=-0.206;VQSLOD=2.3639;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:24:15.15:269,15,0	1/1:10,0:10:7.27:138,7,0	./.	./.	1/1:30,0:29:10.44:214,10,0	1/1:24,0:23:6.49:212,6,0	1/1:19,0:19:6.95:77,7,0	0/0:39,0:39:21.51:0,22,180	0/1:15,0:15:6.89:52,0,7	1/1:29,0:28:45.06:1039,45,0	1/1:15,0:16:11.21:235,11,0	1/1:19,0:19:12.08:222,12,0	1/1:17,0:15:12.98:394,13,0	1/1:18,0:18:12.51:377,13,0	0/0:14,0:18:24.29:0,24,668	1/1:22,1:22:9.50:216,10,0	0/0:23,0:22:9.03:0,9,191	0/0:17,0:16:1.73:0,2,135	1/1:10,5:17:21:621,21,0	1/1:23,0:23:9.50:254,10,0	1/1:16,0:16:3.60:113,4,0	1/1:16,0:16:3.20:127,3,0	1/1:20,0:20:9.48:283,9,0	1/1:17,1:16:9.40:267,9,0	0/0:21,0:21:32.69:0,33,819	0/0:38,0:38:24.39:0,24,1500	0/0:27,0:31:40.34:0,40,1219	0/0:13,0:14:3.01:0,3,84
chr10	5593757	.	TCTC	T	153.53	PASS	AC=4;AF=0.074;AN=54;BaseQRankSum=1.905;DP=522;FS=7.115;HRun=0;HaplotypeScore=192.8790;InbreedingCoeff=0.5858;MQ=38.23;MQ0=11;MQRankSum=-1.760;QD=3.34;ReadPosRankSum=-3.217;VQSLOD=1.1951;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:22:7.82:0,8,186	0/0:7,0:7:8.53:0,9,129	./.	0/0:6,0:2:6.02:0,6,101	0/0:26,0:24:10.03:0,10,218	0/0:14,0:13:10.83:0,11,173	0/0:15,0:15:9.42:0,9,153	0/0:33,0:30:86.96:0,87,1314	0/0:16,0:16:14.27:0,14,238	0/0:22,0:20:60.13:0,60,1111	0/0:15,0:15:10.39:0,10,259	0/0:19,0:19:13.67:0,14,213	0/0:24,0:21:35.91:0,36,429	0/0:20,0:20:19.27:0,19,353	1/1:19,2:21:13.81:134,14,0	0/0:14,0:13:15.03:0,15,257	0/0:15,0:14:9.70:0,10,88	0/0:17,0:17:42.04:0,42,648	0/0:8,0:8:24.05:0,24,366	0/0:17,0:17:9.72:0,10,151	0/0:14,0:14:8.41:0,8,123	0/0:21,0:20:14.56:0,15,141	0/0:21,0:19:9.03:0,9,187	0/0:25,0:23:9.50:0,10,195	1/1:23,2:24:2.40:121,2,0	0/0:43,0:43:99:0,120,1987	0/0:28,0:27:41.80:0,42,762	0/0:10,0:10:26.48:0,26,231
chr10	5593760	.	CTT	C	341.02	PASS	AB=0.990;AC=16;AF=0.308;AN=52;BaseQRankSum=-0.754;DP=506;FS=0.593;HRun=3;HaplotypeScore=183.3988;InbreedingCoeff=-0.0709;MQ=37.82;MQ0=10;MQRankSum=2.614;QD=1.10;ReadPosRankSum=2.781;VQSLOD=-0.0675;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:21,0:20:11.98:12,0,17	0/0:7,0:7:5.08:0,5,33	./.	./.	0/0:24,0:22:3.18:0,3,8	0/0:14,0:13:1.40:0,1,40	0/0:15,0:15:9.72:0,10,54	0/1:27,1:25:0.80:1,0,419	0/0:15,0:15:13.94:0,14,75	0/1:22,0:20:0.16:0,0,198	0/0:15,0:15:8.10:0,8,30	0/0:18,0:18:14.51:0,15,78	0/0:23,0:20:23.03:0,23,186	0/1:20,0:20:1.86:2,0,23	0/1:21,0:21:0.88:58,0,1	0/0:15,1:15:20.28:0,20,134	1/1:15,0:14:10.74:85,11,0	0/0:17,0:17:6.43:0,6,108	0/0:9,0:9:20.67:0,21,171	0/1:17,0:17:15.93:18,0,16	0/1:16,0:16:27.05:27,0,41	0/1:19,2:20:20.37:68,0,20	0/0:19,0:17:7.61:0,8,41	1/1:27,0:25:1.17:14,1,0	0/1:23,0:22:41.67:48,0,42	0/1:40,0:40:15.13:15,0,845	0/1:28,0:27:99:128,0,263	0/1:10,0:10:3.75:4,0,96
chr10	5593761	.	TTTCACACACACA	T	2859.27	PASS	AB=0.959;AC=21;AF=0.404;AN=52;BaseQRankSum=4.699;DP=493;FS=28.546;HRun=0;HaplotypeScore=232.9019;InbreedingCoeff=-0.5914;MQ=37.85;MQ0=10;MQRankSum=-4.624;QD=7.13;ReadPosRankSum=0.707;VQSLOD=1.3048;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:21,0:20:6.32:6,0,64	0/1:6,0:6:26.03:26,0,61	./.	./.	0/1:20,1:20:1.11:7,0,1	0/1:13,0:13:51.37:51,0,104	0/1:14,0:14:7.65:8,0,73	0/1:25,0:22:99:143,0,328	0/1:15,0:15:64.52:65,0,156	0/1:21,0:19:63.12:63,0,370	0/1:13,2:15:11.67:26,0,12	0/1:17,0:17:68.16:71,0,68	0/1:23,0:20:99:234,0,233	0/1:18,0:19:24.24:108,0,24	0/1:22,0:22:4.96:130,0,5	0/0:15,0:15:24:0,24,699	0/1:5,10:14:12.93:154,0,13	0/1:17,0:17:93.02:93,0,175	0/0:8,0:8:24.08:0,24,502	0/0:17,0:17:13.02:0,13,174	0/1:15,0:16:49.31:49,0,172	0/0:21,0:20:24.57:0,25,659	0/1:19,0:17:45.10:45,0,57	0/0:24,0:24:5.27:0,5,39	0/1:23,0:22:40.85:78,0,41	0/1:38,0:40:99:819,0,489	0/1:27,0:26:99:369,0,223	0/1:9,0:10:99:461,0,100
chr10	5593763	.	TCACACACA	T	3930.53	PASS	AB=0.786;AC=30;AF=0.577;AN=52;BaseQRankSum=0.365;DP=488;FS=37.007;HRun=0;HaplotypeScore=206.4551;InbreedingCoeff=-0.0855;MQ=37.77;MQ0=11;MQRankSum=-3.639;QD=9.93;ReadPosRankSum=-1.508;VQSLOD=1.4665;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:5.04:0,5,31	1/1:3,3:6:6.02:147,6,0	./.	./.	1/1:17,5:20:2.43:47,2,0	1/1:9,3:12:9.02:156,9,0	1/1:10,3:13:3.35:58,3,0	0/1:14,0:18:2.60:101,0,3	1/1:13,4:17:2.68:276,3,0	0/1:16,3:17:40.20:213,0,40	1/1:11,3:14:6.02:108,6,0	1/1:12,4:16:8.57:192,9,0	0/1:18,6:21:60.53:576,0,61	1/1:16,3:19:12.01:248,12,0	0/1:14,0:22:22.18:74,0,22	0/0:15,0:15:15.05:0,15,476	0/1:16,0:15:47.10:48,0,47	0/1:11,5:17:75.52:215,0,76	0/0:10,0:10:24.07:0,24,349	0/0:14,0:19:9.50:0,10,273	0/1:16,0:16:86.58:87,0,92	0/0:22,0:21:20.46:0,20,700	0/1:13,6:17:99:149,0,109	0/1:16,10:24:19.29:34,0,19	1/1:13,0:22:4.79:12,5,0	0/1:21,1:38:19.13:676,0,19	0/1:17,0:25:63.76:190,0,64	0/1:4,0:10:30.87:324,0,31
chr10	5593953	.	GAA	G	17000.97	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=15.322;DP=706;FS=0.569;HRun=2;HaplotypeScore=90.8023;InbreedingCoeff=0.9902;MQ=65.19;MQ0=0;MQRankSum=-1.962;QD=44.62;ReadPosRankSum=5.711;VQSLOD=4.7587;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,117,2328	1/1:0,9:9:24.08:392,24,0	0/0:27,0:25:75.21:0,75,1389	0/0:22,0:22:63.22:0,63,1222	1/1:0,30:30:84.29:1369,84,0	1/1:0,29:29:87.30:1419,87,0	1/1:0,27:27:69.24:1126,69,0	0/0:20,0:20:60.20:0,60,1180	1/1:0,25:25:65.99:1076,66,0	1/1:0,30:30:90.28:1420,90,0	1/1:0,16:16:45.15:733,45,0	1/1:1,26:27:75.26:1213,75,0	1/1:0,30:30:68.94:1113,69,0	1/1:0,27:27:78.27:1272,78,0	0/0:34,0:34:99:0,102,2021	0/0:26,0:26:78.27:0,78,1585	1/1:0,31:31:90.31:1468,90,0	1/1:0,19:19:51.17:832,51,0	0/0:22,0:22:66.23:0,66,1342	0/0:26,0:26:78.27:0,78,1584	1/1:0,20:20:57.19:926,57,0	0/0:26,0:26:78.27:0,78,1569	1/1:0,30:30:84.29:1371,84,0	1/1:0,31:31:78.27:1273,78,0	0/0:24,0:24:72.25:0,72,1451	0/0:18,1:19:8.33:0,8,1044	0/0:32,0:32:96.33:0,96,1951	0/0:8,0:8:24.08:0,24,488
chr10	5594753	.	ATGTG	A	722.17	PASS	AB=0.972;AC=4;AF=0.071;AN=56;BaseQRankSum=10.023;DP=1050;FS=10.760;HRun=0;HaplotypeScore=333.8995;InbreedingCoeff=0.4677;MQ=55.70;MQ0=14;MQRankSum=-8.520;QD=5.02;ReadPosRankSum=-1.237;VQSLOD=0.3552;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:55,1:56:99:0,129,2574	0/0:7,0:7:21.07:0,21,429	0/0:55,0:16:23.95:0,24,692	0/0:57,0:28:53.63:0,54,1046	0/0:26,0:26:68.97:0,69,1209	0/0:39,0:39:96.44:0,96,1899	0/0:32,0:32:61.52:0,62,1062	0/0:50,0:49:99:0,119,1949	0/0:40,0:40:86.28:0,86,1634	0/1:61,0:61:2.61:781,0,3	1/1:15,0:15:2.99:23,3,0	0/0:44,0:44:94.40:0,94,1825	0/0:34,0:34:83.42:0,83,1385	0/0:37,0:37:81.17:0,81,1369	0/0:43,0:43:60.65:0,61,1214	0/0:38,0:38:90.28:0,90,1812	0/0:50,2:53:99:0,111,2280	0/0:25,1:26:61.37:0,61,1038	0/0:21,0:20:33.10:0,33,625	0/0:25,0:25:64.35:0,64,1401	0/1:63,4:65:19.27:19,0,34	0/0:38,0:38:98.61:0,99,1924	0/0:20,0:20:51.13:0,51,993	0/0:66,0:66:99:0,151,2942	0/0:25,0:25:57.14:0,57,1007	0/0:38,0:38:63.66:0,64,1625	0/0:26,0:26:65.94:0,66,1100	0/0:7,0:7:21.07:0,21,430
chr10	5594759	.	GTGTGTC	G	3123.85	PASS	AB=0.988;AC=8;AF=0.143;AN=56;BaseQRankSum=-4.425;DP=1036;FS=21.099;HRun=0;HaplotypeScore=362.0161;InbreedingCoeff=0.6263;MQ=54.26;MQ0=20;MQRankSum=-7.097;QD=15.46;ReadPosRankSum=-6.411;VQSLOD=1.1703;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:56:99:0,111,2305	0/0:7,0:7:21.04:0,21,394	0/0:56,0:15:25.69:0,26,776	0/0:55,0:22:45.14:0,45,1088	0/0:28,0:28:21.53:0,22,1012	0/0:39,0:39:74.54:0,75,1883	0/1:29,0:29:49.12:49,0,906	0/0:52,0:51:57.41:0,57,1533	0/0:40,0:40:67.73:0,68,1506	1/1:7,47:54:99:2964,138,0	1/1:2,11:13:2.75:69,3,0	0/0:43,0:43:68.06:0,68,1542	0/0:32,0:32:51.89:0,52,1273	0/0:40,0:40:60.87:0,61,1327	0/0:42,0:42:58.13:0,58,1153	0/0:36,0:36:89.50:0,90,1723	0/0:54,0:54:38.50:0,39,2025	0/0:27,0:26:18.49:0,18,956	0/0:22,0:18:16.51:0,17,543	0/0:26,0:26:46.76:0,47,1297	1/1:48,19:64:11.42:165,11,0	0/0:40,0:40:63.41:0,63,1856	0/0:19,0:19:50.86:0,51,973	0/0:60,0:60:99:0,147,2732	0/0:27,0:27:35.21:0,35,864	0/1:38,1:39:19.32:19,0,1402	0/0:25,0:25:49.54:0,50,1041	0/0:7,0:7:21.06:0,21,395
chr10	5594889	.	ATGTG	A	1286.51	PASS	AB=0.969;AC=16;AF=0.286;AN=56;BaseQRankSum=-5.994;DP=1024;FS=5.180;HRun=0;HaplotypeScore=265.7476;InbreedingCoeff=0.1085;MQ=45.22;MQ0=41;MQRankSum=-1.255;QD=2.80;ReadPosRankSum=-6.186;VQSLOD=0.6136;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:47:15.52:0,16,323	0/0:13,0:13:6.27:0,6,84	0/0:78,0:17:21.07:0,21,350	0/0:98,0:21:21.07:0,21,346	0/0:31,0:32:10.43:0,10,251	0/1:28,0:27:2.26:2,0,160	0/0:30,0:29:16.49:0,16,380	0/0:41,0:41:18.06:0,18,523	0/0:32,0:32:4.53:0,5,351	0/0:31,0:32:54.35:0,54,672	0/0:11,0:11:8.98:0,9,97	0/1:48,0:49:15.70:16,0,664	0/1:28,0:28:44.97:45,0,421	0/0:26,0:26:24.78:0,25,311	0/0:34,0:28:8.07:0,8,244	1/1:7,25:32:23.03:351,23,0	0/0:29,0:27:0.11:0,0,223	0/1:30,0:29:55.31:55,0,283	0/1:19,15:27:4.37:552,0,4	1/1:9,22:28:5.54:100,6,0	0/1:92,0:83:7.42:7,0,405	1/1:11,11:23:20.29:279,20,0	0/1:29,0:29:22.86:23,0,324	0/0:42,0:37:32.18:0,32,396	0/1:25,0:23:4.73:5,0,153	0/1:39,0:37:5.22:5,0,510	0/1:19,0:19:3.07:3,0,97	0/0:11,0:11:1.93:0,2,51
chr10	5594906	.	T	TGC	14288.01	PASS	AB=1.000;AC=45;AF=0.804;AN=56;BaseQRankSum=-7.347;DP=1005;FS=4.021;HRun=0;HaplotypeScore=218.8958;InbreedingCoeff=0.7682;MQ=40.18;MQ0=52;MQRankSum=6.680;QD=19.60;ReadPosRankSum=1.104;VQSLOD=5.0070;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:57,0:48:35.31:419,35,0	1/1:6,7:13:12.32:197,12,0	0/0:82,0:13:28.90:0,29,289	0/0:98,0:10:23.89:0,24,226	1/1:19,11:30:32.71:556,33,0	1/1:13,11:22:26.46:442,26,0	1/1:24,6:29:35.46:761,35,0	1/1:15,35:47:31.66:981,32,0	1/1:19,16:35:52.02:833,52,0	1/1:20,13:33:7.36:1097,7,0	1/1:5,4:9:9.03:161,9,0	1/1:25,24:49:46.33:1369,46,0	1/1:20,7:28:17.44:667,17,0	1/1:19,9:27:13.94:508,14,0	1/1:31,0:24:18.07:313,18,0	0/0:31,0:31:21.50:0,22,128	1/1:15,8:23:49.68:686,50,0	1/1:21,6:26:10.32:593,10,0	0/0:34,0:29:8.23:0,8,323	0/0:31,0:28:15.23:0,15,130	1/1:56,15:63:15.74:722,16,0	0/1:27,0:27:12.33:12,0,84	1/1:18,11:29:41.72:688,42,0	1/1:28,13:35:50.77:852,51,0	1/1:22,0:20:0.26:150,0,0	1/1:17,16:31:69.60:1274,70,0	1/1:15,9:23:47.01:688,47,0	1/1:11,2:13:11.43:317,11,0
chr10	5594907	.	G	GCA	9235.94	PASS	AB=0.993;AC=36;AF=0.643;AN=56;BaseQRankSum=-4.260;DP=1000;FS=15.014;HRun=0;HaplotypeScore=237.7376;InbreedingCoeff=0.2808;MQ=39.86;MQ0=52;MQRankSum=6.694;QD=12.69;ReadPosRankSum=4.106;VQSLOD=2.9419;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:40,22:53:35.21:706,35,0	1/1:12,0:12:10.87:105,11,0	0/0:80,0:13:38.66:0,39,482	0/0:98,0:9:24.08:0,24,362	1/1:31,0:31:26.75:310,27,0	1/1:24,0:22:25.68:266,26,0	0/1:30,0:29:0.17:421,0,0	0/1:45,0:42:99:478,0,119	1/1:35,0:35:23.67:484,24,0	0/1:34,0:34:75.54:583,0,76	1/1:9,0:9:9.02:97,9,0	0/1:49,0:49:24.96:808,0,25	0/1:28,0:28:53.93:392,0,54	0/1:28,0:27:4.90:296,0,5	1/1:8,23:24:29.88:538,30,0	0/0:31,0:31:28.47:0,28,222	1/1:23,0:22:29.22:389,29,0	0/1:27,0:26:13.08:386,0,13	0/0:31,0:27:27.81:0,28,573	0/0:30,0:28:14.67:0,15,212	0/1:74,0:65:31.97:410,0,32	0/1:25,0:27:8.57:9,0,127	1/1:29,0:29:40.52:436,41,0	1/1:41,0:35:44.58:497,45,0	1/1:8,11:18:20.90:318,21,0	1/1:33,0:31:9.54:754,10,0	1/1:23,0:22:26.09:413,26,0	0/1:13,0:13:2.57:139,0,3
chr10	5594912	.	CTG	C	2203.97	PASS	AB=0.938;AC=36;AF=0.643;AN=56;BaseQRankSum=1.563;DP=953;FS=0.690;HRun=0;HaplotypeScore=250.5872;InbreedingCoeff=-0.0048;MQ=39.27;MQ0=52;MQRankSum=0.002;QD=3.02;ReadPosRankSum=2.958;VQSLOD=2.5503;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:54,0:52:11.61:12,0,153	0/1:10,1:11:0.01:0,0,0	0/0:74,0:9:15.05:0,15,203	0/0:90,0:5:2.84:0,3,42	1/1:27,1:33:2.81:35,3,0	0/1:24,2:25:9.29:75,0,9	1/1:25,2:27:11.10:83,11,0	0/0:42,0:38:0.31:0,0,64	0/1:30,1:32:11.74:105,0,12	0/1:27,7:34:23.55:190,0,24	1/1:7,2:9:2.82:33,3,0	1/1:43,1:44:22.33:151,22,0	0/1:21,1:24:15.49:109,0,15	1/1:27,2:28:2.64:17,3,0	0/1:24,0:24:13.37:13,0,26	1/1:19,11:31:20.79:215,21,0	1/1:17,0:19:19.11:110,19,0	0/1:22,0:22:24.68:61,0,25	0/1:25,4:27:3.45:229,0,3	1/1:17,12:28:14.95:161,15,0	0/1:75,1:67:7.55:87,0,8	1/1:7,17:25:9.36:96,9,0	0/1:25,1:27:2.05:33,0,2	1/1:36,2:34:12.77:179,13,0	0/0:13,0:16:0.89:0,1,2	0/1:30,0:28:1.41:135,0,1	1/1:23,0:22:34.01:191,34,0	1/1:9,0:9:7.98:32,8,0
chr10	5594916	.	G	GC	438.68	PASS	AB=0.959;AC=8;AF=0.143;AN=56;BaseQRankSum=5.520;DP=953;FS=5.031;HRun=0;HaplotypeScore=248.3080;InbreedingCoeff=0.1014;MQ=39.06;MQ0=52;MQRankSum=-5.537;QD=2.35;ReadPosRankSum=3.304;VQSLOD=2.4199;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:53,7:54:17.73:0,18,230	0/0:9,0:9:2.84:0,3,23	0/0:74,0:10:30.05:0,30,373	0/0:86,0:6:15.05:0,15,195	0/1:30,1:31:1.23:1,0,86	0/0:25,0:23:16.80:0,17,148	0/0:25,0:24:16.07:0,16,171	0/1:41,0:37:2.79:3,0,551	0/0:34,0:34:10.75:0,11,293	0/0:39,0:39:43.34:0,43,606	0/0:9,0:9:8.84:0,9,57	0/0:41,0:41:26.90:0,27,326	0/0:25,0:25:0.30:0,0,296	0/0:31,0:30:23.78:0,24,201	0/1:25,4:22:36.43:36,0,134	0/0:33,0:33:30.70:0,31,276	0/1:18,2:20:86.35:132,0,86	0/0:23,0:22:20.01:0,20,230	0/0:30,0:26:59.11:0,59,707	0/0:30,0:28:17.19:0,17,136	0/0:81,0:71:43.55:0,44,365	0/0:25,0:25:14.43:0,14,154	0/0:27,0:27:18.05:0,18,235	0/0:40,0:33:37.33:0,37,250	0/0:15,2:17:14.89:0,15,187	0/1:35,0:33:99:137,0,272	1/1:21,0:20:32.61:222,33,0	0/1:10,0:10:32.97:37,0,33
chr10	5594922	.	G	GC	1185.92	PASS	AB=0.813;AC=7;AF=0.125;AN=56;BaseQRankSum=0.654;DP=947;FS=4.865;HRun=0;HaplotypeScore=244.5724;InbreedingCoeff=-0.1848;MQ=39.66;MQ0=51;MQRankSum=-1.916;QD=5.70;ReadPosRankSum=-0.636;VQSLOD=2.9549;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:60,2:55:20.74:0,21,268	0/0:8,3:11:2.62:0,3,41	0/0:65,0:11:27.09:0,27,365	0/0:76,1:6:15.05:0,15,203	0/0:30,2:32:12.68:0,13,144	0/1:22,2:22:32.87:33,0,62	0/1:16,6:21:69.31:69,0,140	0/0:49,0:45:95.93:0,96,1145	0/1:23,14:37:99:256,0,298	0/1:30,11:41:99:567,0,595	0/0:6,2:9:5.95:0,6,60	0/1:27,10:37:99:105,0,320	0/1:18,8:26:99:233,0,259	0/0:30,1:31:11.96:0,12,145	0/0:32,0:26:24.55:0,25,250	0/0:28,1:29:36.25:0,36,339	0/0:19,0:20:41.44:0,41,424	0/1:19,2:19:51.20:51,0,177	0/0:26,0:24:71.41:0,71,685	0/0:28,0:26:27.54:0,28,240	0/0:80,1:72:30.24:0,30,331	0/0:27,0:27:11.42:0,11,106	0/0:26,2:28:0.15:0,0,257	0/0:34,11:37:1.56:0,2,275	0/0:19,0:18:14.86:0,15,192	0/0:36,0:34:87.14:0,87,1007	0/0:21,0:20:38.82:0,39,369	0/0:10,0:10:17.36:0,17,156
chr10	5594926	.	GTGTGTGTGTGTC	G	2068.39	PASS	AB=0.988;AC=19;AF=0.339;AN=56;BaseQRankSum=2.131;DP=935;FS=4.515;HRun=0;HaplotypeScore=318.0716;InbreedingCoeff=-0.3755;MQ=40.35;MQ0=46;MQRankSum=-2.201;QD=3.79;ReadPosRankSum=-4.981;VQSLOD=0.9568;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:63,0:57:19.30:0,19,235	0/0:10,0:10:4.61:0,5,29	0/0:62,0:11:23.95:0,24,478	0/0:70,0:7:12.02:0,12,131	0/0:32,0:33:3.95:0,4,31	0/1:26,1:25:37:86,0,37	0/1:25,0:24:59.76:60,0,60	0/0:43,0:39:12.67:0,13,316	0/1:37,2:39:75.66:373,0,76	0/1:43,0:43:99:576,0,164	1/1:9,0:9:2.25:10,2,0	0/1:36,1:37:8.20:283,0,8	0/1:25,1:26:15.01:359,0,15	0/1:31,1:31:37.91:40,0,38	0/1:31,0:27:22.43:22,0,208	0/0:31,0:31:28.65:0,29,670	0/1:22,0:21:12.98:13,0,272	0/1:21,0:19:63.45:126,0,63	0/1:20,0:19:4.63:5,0,853	0/0:26,0:24:22.88:0,23,606	0/1:77,0:70:37.28:60,0,37	0/0:28,0:28:15.15:0,15,330	0/1:28,0:28:78.92:79,0,97	0/1:45,1:38:52.47:52,0,62	0/1:20,0:19:8.52:20,0,9	0/1:33,0:31:53.97:54,0,645	0/0:22,0:21:15.72:0,16,460	0/1:10,0:10:6.17:6,0,88
chr10	5594928	.	GTGTGTGTGTC	G	5923.95	PASS	AB=0.926;AC=33;AF=0.589;AN=56;BaseQRankSum=-3.453;DP=921;FS=8.615;HRun=0;HaplotypeScore=284.7474;InbreedingCoeff=0.2528;MQ=40.43;MQ0=43;MQRankSum=2.759;QD=8.65;ReadPosRankSum=-5.589;VQSLOD=1.2347;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:63,1:57:10.45:10,0,159	1/1:10,1:11:12.64:92,13,0	0/0:60,0:11:21.07:0,21,380	0/0:69,0:8:12.03:0,12,136	1/1:13,18:32:4.40:36,4,0	1/1:11,15:25:16.45:204,16,0	1/1:23,3:25:35.02:399,35,0	0/1:42,0:38:73.88:74,0,245	1/1:31,7:38:35.54:877,36,0	1/1:41,1:42:63.48:1530,63,0	1/1:7,2:9:2.58:58,3,0	1/1:25,11:37:36.34:660,36,0	1/1:25,0:25:44.75:746,45,0	1/1:10,23:32:2.96:96,3,0	0/1:32,0:29:87.03:107,0,87	0/0:30,0:30:4.42:0,4,591	0/1:21,0:20:15.15:15,0,195	0/1:13,8:19:41.29:323,0,41	0/0:18,0:17:37.92:0,38,746	0/0:27,0:25:3.75:0,4,498	0/1:29,44:67:0.05:126,0,0	0/1:27,0:27:8.42:8,0,210	1/1:11,17:28:1.81:70,2,0	1/1:42,4:38:30.14:374,30,0	0/1:20,0:19:3.96:63,0,4	0/1:32,0:30:55.19:55,0,431	0/0:22,0:21:31.28:0,31,369	0/0:10,0:10:9.17:0,9,97
chr10	5594930	.	GTGTGTGTC	G	4112.84	PASS	AB=0.950;AC=33;AF=0.589;AN=56;BaseQRankSum=-2.995;DP=898;FS=7.957;HRun=0;HaplotypeScore=274.8737;InbreedingCoeff=0.4130;MQ=40.84;MQ0=36;MQRankSum=1.559;QD=6.38;ReadPosRankSum=-4.941;VQSLOD=0.4655;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:27,32:56:5.94:13,0,6	1/1:11,0:11:12.27:92,12,0	0/0:55,0:10:12.01:0,12,154	0/0:66,0:9:15.01:0,15,146	1/1:31,0:31:0.82:2,1,0	1/1:26,0:25:7.15:66,7,0	1/1:28,0:27:31.78:301,32,0	0/1:38,0:34:99:140,0,102	1/1:37,0:37:51.20:586,51,0	1/1:42,0:42:73.56:963,74,0	1/1:10,0:10:5.77:49,6,0	1/1:36,0:37:33.53:489,34,0	1/1:24,0:24:31.48:379,31,0	1/1:32,0:31:2.96:61,3,0	1/1:32,0:30:18.32:262,18,0	0/0:28,0:28:32.27:0,32,533	0/1:22,0:21:44.48:44,0,81	0/1:20,0:19:11.45:214,0,11	0/0:17,0:16:34.65:0,35,542	0/0:26,0:25:21.93:0,22,436	0/1:70,0:66:1.44:7,0,1	0/0:27,0:27:14.35:0,14,196	1/1:28,0:28:3.11:31,3,0	1/1:43,0:36:14.72:153,15,0	0/1:19,0:18:1.48:63,0,1	0/1:34,0:32:99:197,0,156	0/0:23,0:22:0.82:0,1,122	0/0:10,0:10:8.71:0,9,49
chr10	5594932	.	GTGTGTC	G	4105.68	PASS	AB=1.000;AC=39;AF=0.696;AN=56;BaseQRankSum=-0.001;DP=881;FS=2.334;HRun=0;HaplotypeScore=256.9984;InbreedingCoeff=0.3343;MQ=41.16;MQ0=33;MQRankSum=-0.206;QD=5.63;ReadPosRankSum=-0.927;VQSLOD=2.4152;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:56,0:54:2.13:2,0,92	1/1:11,0:11:12.20:91,12,0	0/0:51,0:9:18.04:0,18,288	0/1:63,0:9:9.16:9,0,109	1/1:30,0:30:4.14:14,4,0	0/1:26,0:25:21.34:21,0,22	1/1:28,0:27:32.30:281,32,0	1/1:37,0:33:1.56:288,2,0	1/1:37,0:37:1.56:293,2,0	0/1:42,0:42:17.47:582,0,17	1/1:10,0:10:4.88:34,5,0	1/1:36,0:36:19.24:310,19,0	1/1:26,0:26:29.27:283,29,0	1/1:31,0:31:2.71:47,3,0	1/1:23,9:31:43.47:460,43,0	0/0:28,0:28:24.31:0,24,406	1/1:22,0:21:29.85:212,30,0	0/1:19,0:18:33.13:124,0,33	0/0:18,0:17:33.57:0,34,377	0/0:27,0:25:24.93:0,25,317	0/1:68,0:63:15.73:16,0,22	0/0:28,0:28:17.32:0,17,177	0/1:27,0:27:17.08:17,0,36	1/1:44,0:36:8.78:120,9,0	1/1:14,4:17:14.96:143,15,0	1/1:33,2:33:73.66:548,74,0	1/1:21,2:22:27.69:169,28,0	1/1:8,0:8:10.28:39,10,0
chr10	5594934	.	GTGTC	G	5754.70	PASS	AB=0.987;AC=36;AF=0.643;AN=56;BaseQRankSum=-1.509;DP=872;FS=0.473;HRun=0;HaplotypeScore=234.7987;InbreedingCoeff=0.1877;MQ=41.51;MQ0=31;MQRankSum=2.041;QD=8.46;ReadPosRankSum=-0.276;VQSLOD=4.0107;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:50,6:54:3.81:4,0,84	1/1:11,0:11:14.79:112,15,0	0/0:50,0:11:26.85:0,27,367	0/0:60,0:9:0.95:0,1,136	1/1:30,0:30:4.26:15,4,0	0/1:25,1:25:11.77:12,0,38	1/1:28,0:27:35.06:289,35,0	1/1:28,6:31:68.56:661,69,0	0/1:35,0:35:41.99:240,0,42	0/1:40,0:40:58.13:486,0,58	0/1:10,0:10:0.08:20,0,0	1/1:34,0:34:9.42:229,9,0	1/1:24,0:25:27.23:297,27,0	1/1:31,0:31:2.47:32,2,0	1/1:33,0:33:49.16:439,49,0	0/0:27,0:27:3.87:0,4,271	1/1:17,5:21:38.39:490,38,0	0/1:18,0:18:22.52:74,0,23	0/1:19,0:18:37.80:38,0,227	0/0:27,0:25:23.91:0,24,188	0/1:67,0:62:21.10:29,0,21	0/0:28,0:28:17.53:0,18,145	0/1:27,0:27:16.79:17,0,47	0/1:42,0:35:3.27:93,0,3	1/1:19,0:18:17.48:148,17,0	1/1:8,29:35:94.51:1121,95,0	1/1:2,22:24:38.82:674,39,0	1/1:3,5:8:15.03:235,15,0
chr10	5594936	.	GTC	G	4749.13	PASS	AB=0.975;AC=45;AF=0.804;AN=56;BaseQRankSum=2.922;DP=852;FS=1.134;HRun=0;HaplotypeScore=218.9541;InbreedingCoeff=0.2120;MQ=42.69;MQ0=28;MQRankSum=2.107;QD=6.37;ReadPosRankSum=3.978;VQSLOD=4.5224;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:54,1:54:22.22:22,0,55	1/1:10,0:10:14.92:112,15,0	0/0:49,0:11:22.97:0,23,311	0/0:57,0:12:21.06:0,21,181	1/1:29,0:29:3.03:14,3,0	1/1:26,0:25:7.20:29,7,0	1/1:26,1:26:35.28:281,35,0	1/1:35,0:31:65.40:511,65,0	1/1:30,4:34:9.86:247,10,0	1/1:34,3:37:17.69:476,18,0	1/1:10,0:10:5.18:33,5,0	1/1:33,0:33:36.23:237,36,0	1/1:24,1:25:34.09:291,34,0	1/1:31,0:31:2.67:18,3,0	1/1:30,3:32:45.87:340,46,0	0/1:26,0:26:35.99:36,0,151	1/1:21,0:20:38.33:332,38,0	0/1:17,0:17:13.05:50,0,13	0/1:19,0:18:47.33:47,0,154	0/1:25,1:24:18.22:18,0,78	1/1:64,0:60:12.38:61,12,0	0/1:27,1:28:3.72:4,0,83	0/1:26,1:27:1.28:25,0,1	1/1:42,1:35:23.32:130,23,0	1/1:17,2:18:17.39:148,17,0	1/1:36,0:34:85.87:773,86,0	1/1:24,0:24:38.87:397,39,0	1/1:8,0:8:15.81:114,16,0
chr10	5595599	.	TACACACACAC	T	5981.12	PASS	AB=0.942;AC=28;AF=0.519;AN=54;BaseQRankSum=2.044;DP=495;FS=0.000;HRun=0;HaplotypeScore=173.7761;InbreedingCoeff=0.5899;MQ=59.61;MQ0=10;MQRankSum=-5.223;QD=19.67;ReadPosRankSum=3.518;VQSLOD=3.8007;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:21:16.98:17,0,119	1/1:6,6:11:12.04:291,12,0	0/0:24,0:18:9.03:0,9,163	0/0:19,0:13:0.47:0,0,1	1/1:11,10:21:12.04:319,12,0	1/1:14,9:22:21.07:609,21,0	1/1:13,3:16:9.03:270,9,0	0/0:20,0:18:15.05:0,15,431	1/1:7,10:17:26.68:695,27,0	1/1:9,6:15:18.06:495,18,0	1/1:12,3:15:9.03:217,9,0	1/1:11,9:21:24.08:657,24,0	1/1:14,7:21:11.28:617,11,0	1/1:7,11:18:21.07:584,21,0	0/0:17,0:17:20.99:0,21,522	0/0:8,0:11:21.07:0,21,880	0/0:22,0:22:12.49:0,12,277	0/1:18,2:20:9.21:230,0,9	0/0:14,0:14:24.08:0,24,785	0/0:13,0:22:19.94:0,20,658	0/1:17,2:19:37.66:130,0,38	0/0:16,0:24:18.67:0,19,882	1/1:9,8:17:17.65:463,18,0	1/1:17,8:26:12.51:321,13,0	0/0:9,0:9:3.01:0,3,133	0/1:19,1:20:65.80:66,0,645	0/0:7,0:7:6.02:0,6,173	./.
chr10	5596453	.	ATG	A	890.65	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.526;DP=828;FS=1.480;HRun=0;HaplotypeScore=109.6976;InbreedingCoeff=0.9999;MQ=81.17;MQ0=0;MQRankSum=0.710;QD=32.99;ReadPosRankSum=1.988;VQSLOD=5.9037;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,123,2066	0/0:17,0:17:48.16:0,48,810	0/0:55,0:51:87.38:0,87,1670	0/0:49,0:45:72.65:0,73,1270	0/0:19,0:19:45.15:0,45,757	0/0:16,0:16:48.16:0,48,823	0/0:33,0:33:87.30:0,87,1491	0/0:30,0:30:75.24:0,75,1221	0/0:36,0:36:99:0,102,1731	0/0:32,0:32:87.30:0,87,1492	0/0:19,0:19:51.17:0,51,874	0/0:30,0:30:84.29:0,84,1435	0/0:29,0:29:75.24:0,75,1259	0/0:31,0:31:81.28:0,81,1380	0/0:28,0:28:78.25:0,78,1300	0/0:26,0:26:68.85:0,69,1176	1/1:2,25:27:75.24:986,75,0	0/0:27,0:27:50.22:0,50,1144	0/0:20,0:20:54.18:0,54,926	0/0:26,0:26:75.24:0,75,1241	0/0:41,0:41:99:0,120,2045	0/0:34,0:34:99:0,99,1630	0/0:19,0:19:45.15:0,45,755	0/0:18,0:18:51.13:0,51,838	0/0:33,0:33:96.31:0,96,1614	0/0:40,0:40:99:0,105,1774	0/0:23,0:23:69.22:0,69,1154	0/0:20,0:20:57.18:0,57,949
chr10	5597801	.	GGT	G	538.18	PASS	AB=0.894;AC=13;AF=0.232;AN=56;BaseQRankSum=7.412;DP=272;FS=7.507;HRun=0;HaplotypeScore=87.5808;InbreedingCoeff=-0.3498;MQ=66.93;MQ0=0;MQRankSum=-5.755;QD=3.69;ReadPosRankSum=-0.858;VQSLOD=1.1678;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:12,1:13:10.31:10,0,301	0/0:4,0:4:5.99:0,6,67	0/1:12,0:8:17.24:17,0,47	0/1:15,0:10:17.91:18,0,105	0/0:8,1:9:8.74:0,9,95	0/0:7,0:7:16.29:0,16,174	0/1:14,4:18:36.65:37,0,247	0/0:6,0:6:0.51:0,1,43	0/1:11,1:12:26.03:26,0,181	0/1:10,2:12:28.45:28,0,186	0/0:6,1:7:11.45:0,11,94	0/1:7,1:9:68.26:68,0,122	0/0:12,1:13:6.01:0,6,283	0/1:10,0:12:75.80:76,0,170	0/1:3,2:6:47.72:91,0,48	0/1:3,2:8:84.20:171,0,84	0/1:7,0:8:8.82:9,0,198	0/0:5,0:5:7.30:0,7,97	0/0:10,0:10:30.04:0,30,303	0/0:10,0:11:8.69:0,9,86	0/0:13,0:13:20.97:0,21,217	0/0:14,0:14:20.52:0,21,237	0/0:4,1:5:7.80:0,8,82	0/0:8,0:8:8.51:0,9,95	0/1:5,2:7:67.77:68,0,121	0/0:10,0:10:27.07:0,27,310	0/1:11,2:13:66.18:66,0,257	0/0:3,0:3:9:0,9,87
chr10	5598007	.	TCTC	T	409.20	PASS	AB=1.000;AC=25;AF=0.481;AN=52;BaseQRankSum=-0.651;DP=204;FS=3.410;HRun=0;HaplotypeScore=49.4933;InbreedingCoeff=0.1743;MQ=27.50;MQ0=50;MQRankSum=3.066;QD=3.22;ReadPosRankSum=4.238;VQSLOD=1.2584;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:8,0:6:5.68:28,6,0	0/0:2,0:1:2.90:0,3,16	0/0:18,0:3:6.02:0,6,82	0/1:28,0:5:22.22:22,0,111	1/1:3,0:3:2.84:14,3,0	./.	0/0:9,0:5:7.67:0,8,58	0/0:9,0:4:10.26:0,10,52	1/1:8,0:6:3.16:25,3,0	0/1:9,0:6:5.48:5,0,18	0/0:3,0:3:1.55:0,2,4	0/1:9,0:8:12.14:17,0,12	./.	0/0:7,0:6:4.66:0,5,12	0/1:8,0:7:5.81:6,0,9	1/1:5,3:4:9.03:127,9,0	0/0:7,0:4:7.52:0,8,64	1/1:5,0:4:0.51:14,1,0	1/1:7,0:1:3.01:43,3,0	1/1:2,3:5:2.97:118,3,0	0/0:8,0:6:4.40:0,4,19	1/1:0,3:3:6.02:85,6,0	0/0:5,0:5:3.58:0,4,20	0/1:5,0:6:4.15:4,0,16	0/0:4,0:4:1.55:0,2,4	1/1:5,0:3:3.48:33,3,0	0/1:6,0:5:6.24:6,0,13	0/1:9,0:5:8.79:9,0,10
chr10	5598012	.	TC	T	1833.19	PASS	AB=0.747;AC=33;AF=0.635;AN=52;BaseQRankSum=-0.399;DP=206;FS=14.517;HRun=2;HaplotypeScore=37.6583;InbreedingCoeff=0.0539;MQ=28.09;MQ0=49;MQRankSum=0.979;QD=11.83;ReadPosRankSum=2.751;VQSLOD=0.3549;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:2,5:6:7.94:89,0,8	1/1:0,1:1:3.01:39,3,0	0/0:22,0:3:6.02:0,6,90	0/1:30,1:5:21.78:22,0,123	1/1:0,3:3:3.01:39,3,0	./.	0/1:6,4:6:28.98:137,0,29	0/1:9,3:6:23.17:100,0,23	1/1:5,3:5:9.03:114,9,0	1/1:3,5:6:15.05:194,15,0	1/1:0,1:1:3.01:39,3,0	1/1:3,5:7:18.05:228,18,0	./.	0/1:3,3:5:19.29:105,0,19	0/1:2,4:4:4.23:68,0,4	0/0:9,0:5:4.83:0,5,28	0/1:6,1:4:29.93:30,0,65	0/1:2,3:4:1.82:68,0,2	0/0:8,0:2:2.97:0,3,20	0/0:5,0:5:6.46:0,6,37	0/1:7,1:6:27.04:27,0,92	0/0:4,0:4:3.01:0,3,41	1/1:1,4:5:12.04:156,12,0	1/1:2,4:6:11.81:153,12,0	1/1:2,2:4:6.02:72,6,0	1/1:2,3:4:9.03:114,9,0	1/1:1,4:5:8.54:114,9,0	1/1:6,3:5:6.91:79,7,0
chr10	5598057	.	TC	T	573.42	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-1.108;DP=252;FS=0.000;HRun=9;HaplotypeScore=54.7492;InbreedingCoeff=0.7824;MQ=76.36;MQ0=4;MQRankSum=-2.132;QD=12.74;ReadPosRankSum=0.310;VQSLOD=2.9107;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,4:7:12:110,12,0	0/0:1,0:1:1.25:0,1,3	0/0:38,1:18:22.79:0,23,225	0/0:41,0:15:8.23:0,8,127	0/0:11,0:11:25.68:0,26,130	0/0:6,0:6:11.27:0,11,54	0/0:7,0:7:17.04:0,17,84	1/1:7,4:10:12:109,12,0	0/0:4,0:4:8.52:0,9,42	0/0:8,0:8:20.42:0,20,134	0/0:6,0:6:14.28:0,14,75	0/0:7,0:7:11.45:0,11,59	0/0:3,0:3:8.52:0,9,42	0/0:9,0:9:22.84:0,23,117	1/1:0,10:10:29.96:265,30,0	0/0:11,0:11:29.65:0,30,209	0/0:9,0:9:26.73:0,27,191	0/0:8,0:8:22.88:0,23,121	0/0:6,0:6:11.58:0,12,63	0/0:10,0:10:26.62:0,27,181	0/0:3,0:3:2.58:0,3,14	0/0:7,0:7:17.78:0,18,127	0/0:3,0:3:5.68:0,6,28	0/0:8,0:8:17.36:0,17,105	1/1:1,4:5:8.95:82,9,0	1/1:3,3:6:12:109,12,0	1/1:2,1:3:5.96:47,6,0	1/1:2,1:3:3:27,3,0
chr10	5598066	.	C	CT	3114.12	PASS	AB=1.000;AC=47;AF=0.839;AN=56;BaseQRankSum=-4.691;DP=231;FS=8.719;HRun=0;HaplotypeScore=41.3260;InbreedingCoeff=0.4055;MQ=76.47;MQ0=2;MQRankSum=-3.173;QD=17.90;ReadPosRankSum=-1.437;VQSLOD=4.8605;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,0:6:14.02:76,14,0	1/1:1,0:1:3.01:38,3,0	0/0:24,0:15:32.81:0,33,318	0/0:25,0:10:16.26:0,16,152	1/1:3,9:12:35.93:419,36,0	1/1:0,6:7:12.01:151,12,0	1/1:1,6:7:21.06:281,21,0	1/1:7,0:7:14.38:90,14,0	1/1:1,3:4:9.03:127,9,0	1/1:6,3:10:17.99:184,18,0	1/1:3,6:9:17.92:199,18,0	1/1:4,3:7:12.03:153,12,0	1/1:0,4:4:9.03:128,9,0	1/1:3,6:9:27.06:342,27,0	1/1:12,0:12:27.53:160,28,0	0/1:14,0:14:27.13:35,0,27	0/1:11,0:11:25.51:31,0,26	1/1:1,8:9:21.07:299,21,0	1/1:7,0:7:9.24:63,9,0	0/1:10,0:10:6.49:6,0,28	1/1:1,2:3:3.01:43,3,0	0/0:6,0:6:7.55:0,8,30	1/1:2,2:4:9.02:110,9,0	1/1:4,4:8:3.09:178,3,0	1/1:4,0:4:8.36:41,8,0	1/1:3,0:4:9.37:62,9,0	1/1:4,0:4:5.88:36,6,0	1/1:1,0:1:2.84:14,3,0
chr10	5599082	.	T	TA	23475.89	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=8.491;DP=716;FS=3.036;HRun=1;HaplotypeScore=125.6261;InbreedingCoeff=0.9997;MQ=86.16;MQ0=0;MQRankSum=-7.032;QD=40.76;ReadPosRankSum=3.949;VQSLOD=4.4194;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,50:52:99:2068,138,0	1/1:0,12:12:33.11:495,33,0	0/0:26,0:26:45.87:0,46,854	0/0:25,0:25:75.19:0,75,911	1/1:1,25:26:75.25:1124,75,0	1/1:2,24:26:72.24:1073,72,0	1/1:3,41:44:99:1704,117,0	1/1:1,30:31:93.26:1343,93,0	1/1:0,29:29:75.19:1076,75,0	1/1:0,22:22:66.21:971,66,0	1/1:0,22:22:60.12:849,60,0	1/1:2,19:21:54.18:809,54,0	1/1:0,22:22:57.19:851,57,0	1/1:2,14:16:36.12:538,36,0	1/1:0,27:27:75.21:1098,75,0	0/0:22,0:22:63.20:0,63,818	1/1:1,37:38:99:1573,105,0	1/1:1,22:23:60.20:899,60,0	0/0:20,0:20:54.18:0,54,701	0/0:22,0:22:63.20:0,63,818	1/1:0,31:31:90.30:1349,90,0	0/0:25,0:25:72.23:0,72,935	1/1:0,18:18:51.17:764,51,0	1/1:2,32:34:93.32:1394,93,0	1/1:1,25:26:75.25:1124,75,0	1/1:2,21:23:66.22:981,66,0	1/1:1,23:24:66.22:989,66,0	1/1:0,9:9:27.09:404,27,0
chr10	5599380	.	AGAGC	A	5376.90	PASS	AB=0.855;AC=36;AF=0.643;AN=56;BaseQRankSum=2.299;DP=609;FS=0.944;HRun=0;HaplotypeScore=115.8131;InbreedingCoeff=0.4471;MQ=66.52;MQ0=17;MQRankSum=3.274;QD=12.11;ReadPosRankSum=3.668;VQSLOD=4.4555;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:5.46:0,5,26	0/1:5,0:5:8.96:41,0,9	0/0:24,0:16:24.20:0,24,271	0/0:29,0:18:3.24:0,3,169	1/1:16,0:16:38.77:307,39,0	1/1:20,0:20:53.23:420,53,0	0/1:6,22:27:9.47:28,0,9	1/1:28,0:28:61.30:533,61,0	1/1:30,0:30:2.94:18,3,0	1/1:22,0:22:62.22:572,62,0	1/1:20,0:20:47.82:382,48,0	1/1:11,0:11:1.14:103,1,0	1/1:18,0:18:44.85:360,45,0	1/1:15,0:15:26.96:224,27,0	0/1:24,0:23:48.93:168,0,49	0/0:20,0:19:36.89:0,37,293	1/1:23,0:23:65.19:479,65,0	0/1:6,18:23:12.22:12,0,76	0/0:25,0:23:62.09:0,62,403	0/0:7,0:7:14.85:0,15,104	1/1:27,0:26:38.92:318,39,0	0/0:20,0:19:47.53:0,48,330	1/1:21,0:20:39.83:343,40,0	1/1:27,1:27:31.97:271,32,0	1/1:21,0:21:29.88:235,30,0	0/1:23,0:23:99:307,0,103	0/1:26,0:25:32.44:32,0,44	1/1:14,0:13:13:223,13,0
chr10	5599382	.	AGC	A	5812.06	PASS	AB=1.000;AC=41;AF=0.732;AN=56;BaseQRankSum=2.246;DP=593;FS=2.863;HRun=0;HaplotypeScore=94.1018;InbreedingCoeff=0.7527;MQ=67.74;MQ0=16;MQRankSum=1.115;QD=13.55;ReadPosRankSum=1.832;VQSLOD=4.6054;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:2.92:0,3,8	1/1:4,0:4:5.67:50,6,0	0/0:24,0:16:24.20:0,24,271	0/0:30,0:19:5.79:0,6,201	1/1:16,0:16:41.77:332,42,0	1/1:20,0:20:56.23:445,56,0	0/1:28,0:27:9.11:28,0,9	1/1:6,22:28:65.52:540,66,0	1/1:4,22:26:2.94:18,3,0	1/1:22,0:22:62.94:573,63,0	1/1:19,0:19:47.82:382,48,0	1/1:10,0:10:17.77:145,18,0	1/1:17,0:17:47.85:385,48,0	1/1:15,0:15:26.96:223,27,0	1/1:23,0:22:9.05:202,9,0	0/0:19,0:18:26.43:0,26,225	1/1:23,0:23:65.19:479,65,0	1/1:22,1:22:5.99:63,6,0	0/0:25,0:23:61.15:0,61,401	0/0:7,0:7:14.85:0,15,104	1/1:25,0:24:38.92:318,39,0	0/0:20,0:20:50.53:0,51,355	1/1:19,0:18:39.52:341,40,0	1/1:24,1:24:32.70:271,33,0	1/1:22,0:22:32.87:260,33,0	1/1:23,0:23:47.88:422,48,0	1/1:26,0:25:0.83:45,1,0	1/1:15,0:14:35.93:290,36,0
chr10	5599384	.	C	CGA	4240.21	PASS	AB=0.914;AC=25;AF=0.446;AN=56;BaseQRankSum=-1.338;DP=566;FS=1.091;HRun=0;HaplotypeScore=99.3564;InbreedingCoeff=0.4898;MQ=69.92;MQ0=15;MQRankSum=-0.752;QD=13.95;ReadPosRankSum=-0.666;VQSLOD=4.2868;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,32:35:3.01:32,3,0	1/1:4,0:4:0.46:2,0,0	0/0:25,0:17:44.31:0,44,526	0/0:31,0:20:36.59:0,37,491	0/0:17,0:17:3.97:0,4,13	0/1:20,0:20:2.86:42,0,3	0/1:24,0:23:1.38:1,0,30	1/1:25,0:25:66.18:968,66,0	0/0:22,0:22:0.47:0,0,1	0/1:22,0:22:3.26:16,0,3	0/0:18,0:18:5.51:0,6,16	0/1:11,0:11:2.43:18,0,2	0/0:18,0:18:2.22:0,2,6	0/0:13,0:13:2.30:0,2,5	1/1:20,1:20:29.63:498,30,0	0/0:20,0:19:33.08:0,33,468	1/1:23,0:23:66.10:879,66,0	1/1:20,0:19:3.47:27,3,0	0/0:26,0:24:60.18:0,60,810	0/0:7,0:7:15.05:0,15,215	0/0:25,0:25:0.97:0,1,3	0/0:21,0:21:51.16:0,51,707	0/0:19,0:18:0.67:0,1,23	1/1:25,0:24:1.04:17,1,0	1/1:17,0:17:33.11:488,33,0	1/1:19,0:19:42.06:645,42,0	0/1:6,18:24:8.36:102,0,8	1/1:13,0:12:36.08:504,36,0
chr10	5599995	.	G	GA	5767.16	PASS	AB=0.754;AC=29;AF=0.518;AN=56;BaseQRankSum=3.299;DP=484;FS=3.141;HRun=7;HaplotypeScore=104.7410;InbreedingCoeff=0.7295;MQ=45.16;MQ0=21;MQRankSum=-5.495;QD=19.62;ReadPosRankSum=0.114;VQSLOD=3.9343;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:29:48.98:0,49,445	0/1:6,6:11:7.90:185,0,8	0/0:4,1:5:5.98:0,6,51	0/0:7,0:4:5.02:0,5,28	1/1:6,11:15:4.25:301,4,0	1/1:5,19:23:54.17:650,54,0	1/1:13,13:20:36.07:418,36,0	0/0:31,0:30:57.03:0,57,539	1/1:4,11:14:39.11:458,39,0	1/1:9,13:21:45.14:542,45,0	1/1:4,15:18:36.06:408,36,0	1/1:9,9:17:30.09:362,30,0	1/1:5,10:15:33.06:376,33,0	1/1:8,11:20:7.21:361,7,0	0/0:14,0:14:27.03:0,27,260	0/0:17,1:18:5.79:0,6,319	1/1:12,12:21:16.19:446,16,0	1/1:11,15:26:54.16:648,54,0	0/0:16,0:14:30.05:0,30,288	0/0:16,0:16:23.55:0,24,230	1/1:3,5:8:18.02:202,18,0	0/0:11,0:11:21.01:0,21,196	1/1:12,4:16:18.87:181,19,0	0/1:7,8:13:37.50:226,0,38	0/0:14,0:14:27.04:0,27,260	0/1:16,1:16:2.88:3,0,122	0/0:20,0:18:38.83:0,39,373	0/0:9,0:9:9.20:0,9,162
chr10	5600008	.	G	GAA	10110.18	PASS	AB=0.601;AC=49;AF=0.875;AN=56;BaseQRankSum=-2.404;DP=547;FS=19.731;HRun=10;HaplotypeScore=108.9634;InbreedingCoeff=0.5324;MQ=55.47;MQ0=19;MQRankSum=-3.464;QD=19.18;ReadPosRankSum=1.320;VQSLOD=2.1955;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:19,1:40:88.79:782,89,0	0/1:5,9:13:5.55:178,0,6	0/0:7,0:7:18.18:0,18,161	0/0:13,0:10:17.90:0,18,163	1/1:6,15:21:43.07:464,43,0	1/1:15,9:23:48.07:629,48,0	1/1:9,13:19:35.52:451,36,0	1/1:15,0:33:53.51:431,54,0	1/1:6,11:16:24.05:333,24,0	1/1:8,13:21:41.61:547,42,0	1/1:8,15:24:47.47:566,47,0	1/1:8,8:16:15.02:200,15,0	1/1:6,10:16:20.98:261,21,0	1/1:6,9:16:6.48:370,6,0	1/1:8,0:14:12.01:114,12,0	0/1:5,13:18:18.55:411,0,19	1/1:8,15:23:37.50:423,38,0	1/1:6,18:25:51.01:683,51,0	1/1:4,19:21:57.15:773,57,0	1/1:5,13:20:41.54:530,42,0	1/1:2,7:9:12:154,12,0	1/1:2,14:16:32.98:412,33,0	1/1:2,9:11:20.89:213,21,0	0/1:7,11:17:1.08:245,0,1	1/1:5,1:16:21.03:216,21,0	1/1:7,2:24:41.18:352,41,0	1/1:8,0:19:26.49:228,26,0	1/1:5,1:11:14.90:145,15,0
chr10	5600475	.	A	AAGG	4072.68	PASS	AB=0.941;AC=9;AF=0.161;AN=56;BaseQRankSum=-10.936;DP=596;FS=9.919;HRun=0;HaplotypeScore=103.8316;InbreedingCoeff=0.8487;MQ=88.89;MQ0=0;MQRankSum=-2.112;QD=38.06;ReadPosRankSum=1.117;VQSLOD=4.2326;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:75.24:0,75,1109	0/0:3,0:3:9.03:0,9,135	0/0:37,0:37:65.36:0,65,890	0/0:22,0:22:41.95:0,42,490	0/0:16,0:16:38.95:0,39,567	0/0:17,0:17:48.15:0,48,701	0/0:31,0:31:72.21:0,72,1022	0/0:26,0:26:57.16:0,57,782	0/0:25,0:25:60.19:0,60,881	0/0:28,0:28:72.21:0,72,1011	0/0:9,0:9:27.08:0,27,386	0/0:14,0:14:39.12:0,39,567	0/0:25,0:25:63.20:0,63,926	0/0:24,0:24:57.16:0,57,798	0/1:15,1:16:18.04:18,0,568	1/1:6,21:27:66.23:1384,66,0	0/0:30,0:30:66.19:0,66,952	0/0:19,0:19:51.17:0,51,767	1/1:4,19:23:57.20:1181,57,0	1/1:6,11:17:30.10:605,30,0	0/0:17,0:17:33.11:0,33,497	1/1:5,19:24:50.94:884,51,0	0/0:15,0:15:36.09:0,36,502	0/0:34,0:34:81.27:0,81,1215	0/0:18,0:18:48.14:0,48,683	0/0:20,0:20:45.15:0,45,660	0/0:21,0:21:36.10:0,36,519	0/0:5,0:5:12.02:0,12,159
chr10	5601052	.	T	TATATAA	1955.46	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=0.296;DP=269;FS=2.091;HRun=0;HaplotypeScore=66.2607;InbreedingCoeff=0.3241;MQ=70.26;MQ0=2;MQRankSum=-2.186;QD=18.62;ReadPosRankSum=0.360;VQSLOD=3.0199;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:0,7:8:18.06:596,18,0	0/0:7,0:7:13.32:0,13,44	0/0:12,0:10:10.86:0,11,241	0/0:5,0:4:4.14:0,4,40	0/0:16,0:16:32.70:0,33,133	0/0:20,0:20:33.40:0,33,153	0/0:4,0:4:9.03:0,9,30	0/1:31,0:31:90.35:636,0,90	0/0:7,0:7:8.88:0,9,29	0/0:13,0:12:10.72:0,11,73	0/0:12,0:12:12.66:0,13,40	0/0:3,0:3:4.44:0,4,15	0/0:5,0:5:5.23:0,5,75	0/1:7,0:7:3.11:3,0,49	1/1:0,2:2:3.01:105,3,0	0/0:6,0:6:18.06:0,18,414	0/1:25,0:25:99:353,0,101	0/0:23,0:23:35.52:0,36,117	0/0:5,0:5:15.03:0,15,254	0/0:16,0:16:39.08:0,39,785	0/1:7,0:7:19.27:19,0,27	0/0:4,0:4:12.03:0,12,194	0/0:4,0:4:2.22:0,2,7	0/0:2,0:2:2.22:0,2,7	1/1:2,4:5:6.02:210,6,0	1/1:5,0:5:3.01:51,3,0	0/1:6,0:6:19:19,0,31	1/1:8,0:7:6.02:121,6,0
chr10	5601199	.	C	CCTAT	6715.80	PASS	AC=46;AF=0.852;AN=54;BaseQRankSum=0.969;DP=451;FS=1.960;HRun=0;HaplotypeScore=94.0371;InbreedingCoeff=0.7089;MQ=68.26;MQ0=5;MQRankSum=-1.119;QD=19.24;ReadPosRankSum=-2.009;VQSLOD=4.2876;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:18.95:0,19,282	1/1:4,0:3:4.84:13,5,0	0/0:28,0:18:2.71:0,3,38	./.	1/1:6,0:19:11.27:121,11,0	1/1:10,11:20:15.05:354,15,0	1/1:12,0:12:6.02:94,6,0	1/1:38,0:38:15.04:239,15,0	1/1:2,8:10:24.08:565,24,0	1/1:18,0:27:27.36:347,27,0	1/1:10,1:17:6.12:130,6,0	1/1:8,12:20:27.09:636,27,0	1/1:3,3:6:12.04:281,12,0	1/1:10,0:10:19.28:201,19,0	1/1:12,2:14:21.07:465,21,0	0/0:3,0:3:0.89:0,1,2	0/0:22,0:22:39.11:0,39,578	1/1:11,3:14:18.06:419,18,0	1/1:17,0:16:16.06:109,16,0	1/1:25,0:25:25.35:392,25,0	1/1:8,5:13:15.05:352,15,0	1/1:7,0:7:2.49:5,2,0	1/1:14,3:17:21.07:488,21,0	1/1:6,3:9:15.05:302,15,0	1/1:8,2:10:12.04:253,12,0	1/1:14,3:17:27.03:455,27,0	1/1:7,0:7:15.04:236,15,0	1/1:9,1:10:12.04:260,12,0
chr10	5601237	.	TATC	T	2612.30	PASS	AB=0.890;AC=22;AF=0.393;AN=56;BaseQRankSum=-0.175;DP=440;FS=2.315;HRun=0;HaplotypeScore=138.9852;InbreedingCoeff=0.1210;MQ=47.09;MQ0=4;MQRankSum=-2.264;QD=11.66;ReadPosRankSum=-0.339;VQSLOD=3.4984;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:14.92:0,15,387	0/0:6,0:5:7.47:0,7,83	0/0:16,0:4:0.67:0,1,47	0/0:13,0:2:3.01:0,3,42	0/0:22,0:19:23.84:0,24,301	0/0:18,0:17:27.02:0,27,313	0/1:13,1:14:59.53:60,0,225	0/1:34,0:32:90.66:91,0,407	0/0:19,0:19:48.01:0,48,587	0/0:27,0:24:7.51:0,8,620	0/0:19,0:17:29.06:0,29,318	0/0:15,0:15:32.98:0,33,450	0/1:7,1:8:26.26:26,0,170	0/0:12,0:12:2.94:0,3,238	1/1:13,7:18:19.33:273,19,0	0/1:8,0:8:16.32:40,0,16	0/0:22,0:22:63.56:0,64,1129	0/1:12,3:15:99:120,0,282	1/1:3,9:11:8.15:409,8,0	1/1:2,22:24:39.13:621,39,0	0/1:11,1:11:48.88:49,0,137	1/1:0,7:7:6.02:100,6,0	0/1:11,3:14:99:152,0,168	0/1:10,1:10:68.69:69,0,161	0/1:5,2:5:34.84:87,0,35	0/1:12,4:16:64.84:283,0,65	1/1:12,6:16:11.47:226,11,0	1/1:1,3:4:12.04:188,12,0
chr10	5601240	.	C	CT	1799.71	PASS	AB=0.927;AC=29;AF=0.518;AN=56;BaseQRankSum=4.347;DP=426;FS=1.677;HRun=1;HaplotypeScore=133.9196;InbreedingCoeff=-0.1297;MQ=46.43;MQ0=2;MQRankSum=0.189;QD=5.77;ReadPosRankSum=2.799;VQSLOD=0.6909;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,1:27:17.57:0,18,252	0/1:3,3:5:11.80:132,0,12	0/0:17,0:4:9.78:0,10,97	0/0:10,0:2:3.01:0,3,42	0/1:22,0:19:99:148,0,161	0/0:17,0:16:4.53:0,5,172	0/1:13,0:13:67.57:68,0,254	0/1:31,0:29:90.53:91,0,468	0/0:19,0:19:12.08:0,12,332	0/1:21,0:18:99:140,0,323	0/1:18,1:17:99:212,0,163	0/1:15,0:15:7.49:7,0,73	0/1:7,0:7:4.04:4,0,81	0/1:7,5:12:99:209,0,104	1/1:15,5:18:15.76:96,16,0	1/1:1,8:9:6.02:92,6,0	0/0:22,0:22:63.02:0,63,860	0/1:13,2:15:44.43:44,0,198	0/1:11,0:11:9.78:174,0,10	1/1:23,0:23:34.04:139,34,0	0/1:9,2:10:5.56:6,0,70	1/1:7,0:7:5.60:25,6,0	0/1:13,0:13:17.21:17,0,116	0/1:9,1:9:80.04:82,0,80	1/1:7,0:5:6.93:20,7,0	0/1:16,1:17:22.21:165,0,22	1/1:18,1:17:7.61:72,8,0	1/1:4,0:4:8.45:26,8,0
chr10	5601246	.	TTATCTATTATC	T	2894.34	PASS	AB=0.909;AC=13;AF=0.232;AN=56;BaseQRankSum=0.057;DP=426;FS=4.628;HRun=0;HaplotypeScore=192.3361;InbreedingCoeff=0.7402;MQ=45.33;MQ0=1;MQRankSum=-4.182;QD=23.15;ReadPosRankSum=0.291;VQSLOD=2.4868;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:17,11:28:10.60:80,11,0	0/0:6,0:5:6.02:0,6,138	0/0:16,0:3:3.90:0,4,62	0/0:7,0:2:6.02:0,6,184	0/0:22,0:19:28.82:0,29,586	0/0:15,0:14:27.09:0,27,611	0/0:10,0:12:27.04:0,27,525	1/1:15,15:28:45.11:1035,45,0	0/0:22,0:23:63.04:0,63,1145	0/0:22,0:19:39.06:0,39,777	0/0:19,0:17:25.86:0,26,494	0/0:16,0:16:42.06:0,42,883	0/0:10,0:10:27.09:0,27,559	0/0:11,0:11:24.05:0,24,432	0/1:15,2:18:17.70:144,0,18	0/0:8,0:8:14.92:0,15,219	0/0:21,0:21:49.38:0,49,1798	0/0:14,0:16:27.03:0,27,608	0/0:12,0:12:29.47:0,29,440	0/0:24,0:24:30.10:0,30,639	0/0:9,0:10:8.68:0,9,225	0/0:7,0:7:6.02:0,6,147	0/0:14,0:14:24.08:0,24,489	0/0:8,0:8:6.84:0,7,195	1/1:4,3:5:6.02:102,6,0	1/1:13,3:16:42.14:953,42,0	1/1:15,3:17:33.04:659,33,0	1/1:4,0:4:6.02:97,6,0
chr10	5601253	.	TTATC	T	1865.08	PASS	AB=0.911;AC=15;AF=0.268;AN=56;BaseQRankSum=3.875;DP=434;FS=11.138;HRun=0;HaplotypeScore=163.2022;InbreedingCoeff=0.4716;MQ=43.95;MQ0=0;MQRankSum=-5.232;QD=11.04;ReadPosRankSum=0.402;VQSLOD=2.7808;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:26:14.04:84,14,0	0/0:6,0:5:9.03:0,9,144	0/0:20,0:3:1.82:0,2,45	0/0:10,0:4:12.04:0,12,235	0/1:20,0:17:75.42:75,0,361	0/0:16,0:15:37.48:0,37,544	0/0:13,0:14:29.89:0,30,434	0/1:26,0:25:47.85:352,0,48	0/0:24,0:25:71.39:0,71,932	0/0:23,0:19:47.88:0,48,667	0/1:21,0:19:29.98:30,0,471	0/0:18,0:18:50.58:0,51,812	0/0:13,0:13:36.04:0,36,471	0/1:10,4:14:99:126,0,281	1/1:11,5:15:11.87:168,12,0	0/0:8,0:8:9.78:0,10,214	0/0:19,0:20:51.17:0,51,1262	0/0:13,0:15:31.66:0,32,375	0/0:13,0:13:2.97:0,3,365	0/0:22,0:22:33.05:0,33,449	0/0:9,0:10:11.17:0,11,173	0/0:8,0:8:9.03:0,9,135	0/0:14,0:14:24.58:0,25,416	0/0:7,0:8:14.12:0,14,153	0/1:5,2:5:1.61:99,0,2	1/1:11,5:16:39.11:525,39,0	1/1:12,5:15:35.06:482,35,0	1/1:1,3:4:6.02:100,6,0
chr10	5601261	.	CTAT	C	1302.19	PASS	AB=0.959;AC=21;AF=0.375;AN=56;BaseQRankSum=-0.595;DP=428;FS=14.680;HRun=0;HaplotypeScore=159.5055;InbreedingCoeff=-0.2973;MQ=42.27;MQ0=0;MQRankSum=1.120;QD=4.26;ReadPosRankSum=7.827;VQSLOD=0.5398;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:23:47.18:47,0,99	0/0:4,0:3:4.01:0,4,26	0/1:19,0:3:2.05:2,0,37	0/0:12,0:4:12.04:0,12,267	0/1:22,0:19:12.77:13,0,133	0/1:15,0:14:17.75:18,0,150	0/1:15,0:15:11.60:12,0,104	0/1:22,0:21:99:335,0,134	0/1:27,0:27:9.53:10,0,305	0/1:24,0:20:7.64:8,0,184	0/1:19,0:17:13.65:14,0,153	0/0:20,0:19:14.25:0,14,363	0/1:12,0:12:2.19:2,0,193	0/1:14,0:14:62.21:62,0,78	0/1:14,3:15:92.03:92,0,201	0/0:10,0:10:17.98:0,18,278	0/0:20,0:20:55.40:0,55,1076	0/1:13,0:13:43.78:44,0,71	0/0:15,0:15:42.08:0,42,625	0/0:20,0:20:36.12:0,36,697	0/1:8,0:7:6.39:6,0,36	0/0:11,0:11:14.97:0,15,261	0/0:10,0:10:6.12:0,6,177	0/1:8,0:7:13.42:13,0,32	1/1:6,0:4:6.01:62,6,0	0/1:12,4:16:35.76:384,0,36	0/1:12,6:17:44.50:259,0,44	1/1:4,0:4:6.02:77,6,0
chr10	5601264	.	TTATC	T	3187.82	PASS	AB=0.967;AC=32;AF=0.571;AN=56;BaseQRankSum=-0.295;DP=440;FS=11.503;HRun=0;HaplotypeScore=164.7451;InbreedingCoeff=0.5435;MQ=41.53;MQ0=2;MQRankSum=-0.001;QD=10.56;ReadPosRankSum=4.289;VQSLOD=2.5169;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:22:2.08:0,2,327	1/1:3,1:3:2.20:58,2,0	1/1:23,0:3:0.47:1,0,0	0/0:13,0:4:12.02:0,12,248	1/1:22,4:23:9.82:174,10,0	1/1:9,3:11:15.64:201,16,0	1/1:13,1:17:24.38:305,24,0	0/1:21,0:20:53.59:54,0,391	0/1:21,4:26:99:433,0,153	1/1:21,5:22:23.48:354,23,0	1/1:16,4:18:18.41:254,18,0	1/1:20,4:23:17.41:195,17,0	1/1:11,2:13:27.59:298,28,0	1/1:15,0:15:24.81:223,25,0	0/0:15,0:14:31.34:0,31,479	0/0:8,0:9:21.07:0,21,380	0/0:19,0:19:48.16:0,48,1191	1/1:9,3:13:16.43:330,16,0	0/0:16,0:17:30.10:0,30,674	0/0:22,0:22:36.12:0,36,807	1/1:5,0:7:5.85:93,6,0	0/0:10,0:11:18.03:0,18,328	1/1:11,0:11:18.18:173,18,0	1/1:5,1:6:5.89:103,6,0	0/0:5,0:3:5.60:0,6,26	0/1:16,0:17:94.32:94,0,199	0/1:17,0:17:42.12:42,0,205	0/0:3,0:3:3.27:0,3,13
chr10	5601274	.	A	ATCT	3892.30	PASS	AB=0.941;AC=29;AF=0.518;AN=56;BaseQRankSum=-1.482;DP=452;FS=7.433;HRun=0;HaplotypeScore=160.5891;InbreedingCoeff=0.2667;MQ=41.52;MQ0=2;MQRankSum=1.551;QD=13.51;ReadPosRankSum=3.066;VQSLOD=2.5135;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:24:28.46:0,28,375	1/1:4,1:4:11.98:155,12,0	0/0:19,0:2:1.55:0,2,4	0/0:12,0:4:12.02:0,12,173	0/1:15,7:19:25.22:156,0,25	1/1:7,5:11:24.09:327,24,0	0/1:16,1:17:15.94:131,0,16	0/0:33,0:32:57.21:0,57,1033	0/1:27,0:27:99:110,0,395	1/1:14,11:21:55.34:916,55,0	1/1:9,7:15:26.08:285,26,0	1/1:12,11:22:37.06:584,37,0	0/1:11,5:16:14.32:241,0,14	1/1:9,7:16:26.82:381,27,0	0/0:16,0:14:31.74:0,32,406	0/1:11,0:11:13.48:13,0,286	0/0:17,0:17:48.16:0,48,799	1/1:11,1:12:25.69:245,26,0	0/1:16,0:16:39.02:39,0,447	0/0:22,0:22:21.96:0,22,562	1/1:7,0:7:1.89:64,2,0	0/0:12,0:12:0.80:0,1,222	1/1:9,4:13:15.31:150,15,0	1/1:8,0:7:5.35:16,5,0	0/0:8,0:6:14.63:0,15,164	0/1:17,0:17:48.95:49,0,309	0/1:20,0:18:22.63:23,0,277	0/1:4,0:4:7.26:8,0,7
chr10	5601277	.	TA	T	1577.95	PASS	AB=0.968;AC=28;AF=0.500;AN=56;BaseQRankSum=2.161;DP=441;FS=7.130;HRun=1;HaplotypeScore=153.6977;InbreedingCoeff=-0.0495;MQ=42.17;MQ0=2;MQRankSum=-0.347;QD=5.06;ReadPosRankSum=4.681;VQSLOD=0.4942;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:23:34.92:0,35,355	0/1:4,1:4:8.17:58,0,8	1/1:16,0:2:1.55:4,2,0	0/0:10,0:4:12.02:0,12,167	1/1:19,1:17:0.79:72,1,0	1/1:11,0:10:25.91:142,26,0	0/1:15,2:17:24.62:109,0,25	0/0:33,0:32:79.86:0,80,1045	0/1:24,1:25:99:138,0,325	1/1:24,1:21:5.22:234,5,0	1/1:17,0:15:5.77:116,6,0	0/1:22,0:21:41.57:160,0,42	0/1:15,1:16:44.86:102,0,45	1/1:14,1:15:15.99:173,16,0	0/0:16,0:14:31.96:0,32,419	0/1:11,0:11:17.39:17,0,276	0/0:17,0:17:51.17:0,51,809	0/1:14,0:14:20.31:77,0,20	0/1:17,0:17:42.95:43,0,466	0/0:21,0:21:19.95:0,20,545	0/1:7,0:7:11.05:49,0,11	0/1:12,0:12:1.21:1,0,211	0/1:10,1:11:43.90:72,0,44	1/1:8,0:7:7.27:32,7,0	0/0:8,0:6:14.63:0,15,159	0/1:19,0:19:99:112,0,293	0/1:20,0:18:26.99:27,0,268	0/1:4,0:4:7.23:10,0,7
chr10	5601278	.	ATCT	A	2958.16	PASS	AB=0.861;AC=35;AF=0.625;AN=56;BaseQRankSum=0.441;DP=444;FS=0.983;HRun=0;HaplotypeScore=159.7137;InbreedingCoeff=0.2929;MQ=42.18;MQ0=2;MQRankSum=0.804;QD=8.75;ReadPosRankSum=3.078;VQSLOD=2.7102;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:20,4:23:99:207,0,180	1/1:6,0:5:10.55:116,11,0	1/1:15,0:2:2.94:18,3,0	0/0:10,0:4:9.03:0,9,126	0/1:20,0:17:2.27:39,0,2	1/1:11,0:10:14.18:57,14,0	0/1:18,0:18:15.53:76,0,16	0/0:34,0:33:62.15:0,62,785	1/1:25,0:25:41.52:294,42,0	1/1:25,0:21:40.49:287,40,0	1/1:17,0:15:20.02:114,20,0	1/1:22,0:21:33.43:307,33,0	1/1:13,3:16:25.65:274,26,0	1/1:15,0:15:23.02:165,23,0	0/0:13,3:14:27.12:0,27,226	0/1:8,3:11:32.54:33,0,160	0/0:17,0:17:51.17:0,51,895	1/1:15,0:14:33.17:287,33,0	0/1:15,2:17:69.04:69,0,358	0/0:21,0:21:37.71:0,38,488	1/1:7,1:8:6.96:117,7,0	0/1:9,2:11:10.26:10,0,153	1/1:11,0:11:19.44:209,19,0	1/1:8,0:7:6.60:23,7,0	0/0:8,0:6:14.71:0,15,179	0/1:15,4:19:99:247,0,165	0/1:13,7:18:99:159,0,148	0/1:3,1:4:6.97:38,0,7
chr10	5601281	.	T	TTA	851.86	PASS	AB=0.702;AC=29;AF=0.518;AN=56;BaseQRankSum=3.775;DP=455;FS=6.676;HRun=0;HaplotypeScore=158.8033;InbreedingCoeff=-0.3642;MQ=43.44;MQ0=4;MQRankSum=-1.048;QD=2.21;ReadPosRankSum=-1.993;VQSLOD=1.6363;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:13,0:19:2.98:3,0,124	1/1:3,0:5:10.29:46,10,0	1/1:13,0:1:1.82:5,2,0	0/0:9,0:4:9.03:0,9,137	0/1:8,0:17:2.27:2,0,114	0/1:7,0:11:60.05:60,0,63	0/1:10,0:18:29.21:29,0,125	0/0:33,0:31:71.01:0,71,973	0/1:12,0:25:51.03:51,0,144	0/1:11,0:23:67.73:170,0,68	0/1:8,0:15:14.31:14,0,92	0/1:6,0:22:16.97:66,0,17	0/1:8,0:16:15.72:16,0,53	0/1:3,0:12:33.85:34,0,36	1/1:12,2:18:7.92:32,8,0	1/1:10,0:12:9.16:46,9,0	0/0:19,0:18:54.16:0,54,782	0/1:9,0:15:22.09:22,0,93	0/1:17,0:18:42.51:43,0,379	0/1:14,0:21:61.27:61,0,188	0/1:6,0:9:16.38:19,0,16	0/1:10,0:12:31.69:35,0,32	0/1:3,0:12:19.43:19,0,40	0/1:4,0:8:18.61:19,0,46	0/0:9,0:7:12.02:0,12,161	0/1:12,0:19:56.14:56,0,196	0/1:19,0:20:55.77:56,0,123	1/1:5,0:5:9.01:111,9,0
chr10	5601931	.	AT	A	7391.93	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=13.671;DP=539;FS=1.067;HRun=5;HaplotypeScore=53.6845;InbreedingCoeff=0.9989;MQ=82.21;MQ0=0;MQRankSum=-2.327;QD=30.42;ReadPosRankSum=5.198;VQSLOD=5.0207;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,144,1951	1/1:0,8:8:24.07:272,24,0	0/0:15,0:14:36.10:0,36,450	0/0:21,0:21:48.11:0,48,610	1/1:0,22:22:63.18:715,63,0	1/1:0,10:10:30.09:340,30,0	1/1:1,18:19:48.14:545,48,0	0/0:30,0:30:87.29:0,87,1189	1/1:1,17:18:45.13:510,45,0	1/1:2,20:22:63.11:689,63,0	1/1:1,16:17:48.14:544,48,0	1/1:1,12:13:36.10:408,36,0	1/1:1,15:16:45.13:511,45,0	1/1:0,16:16:48.14:544,48,0	0/0:19,0:19:54.16:0,54,709	0/0:11,0:11:33.10:0,33,436	0/0:22,0:22:63.18:0,63,843	1/1:1,20:21:51.15:579,51,0	0/0:19,0:19:51.17:0,51,696	0/0:21,0:21:57.19:0,57,778	1/1:0,19:19:48.14:545,48,0	0/0:8,0:8:24.07:0,24,314	1/1:2,17:19:48.14:545,48,0	1/1:1,22:23:57.16:647,57,0	0/0:16,0:16:45.15:0,45,614	0/0:18,1:19:23.15:0,23,705	0/0:31,0:31:84.28:0,84,1149	0/0:13,0:13:39.13:0,39,534
chr10	5602566	.	TTCCTCTTCCTCCTCC	T	4150.21	PASS	AB=0.543;AC=7;AF=0.125;AN=56;BaseQRankSum=11.069;DP=719;FS=0.000;HRun=0;HaplotypeScore=276.0605;InbreedingCoeff=0.8271;MQ=64.34;MQ0=13;MQRankSum=-3.590;QD=46.63;ReadPosRankSum=-0.628;VQSLOD=2.2814;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:87.22:0,87,4115	0/0:13,0:13:33.11:0,33,2069	0/0:55,0:30:26.83:0,27,379	0/0:32,0:18:12.03:0,12,441	0/0:16,0:16:33.09:0,33,1329	0/0:24,0:24:69.24:0,69,3950	0/0:22,0:22:63.19:0,63,3028	0/0:23,0:22:33.10:0,33,986	0/0:30,0:30:57.20:0,57,3466	0/0:27,0:27:63.21:0,63,3449	0/0:21,0:21:51.16:0,51,2757	0/0:24,0:24:57.15:0,57,2812	0/0:28,0:27:54.17:0,54,2786	0/0:35,0:35:84.26:0,84,4545	0/0:28,0:28:57.17:0,57,3014	0/1:3,16:19:99:953,0,120	0/0:24,0:24:25.61:0,26,2190	0/0:15,0:15:36.12:0,36,1766	1/1:8,14:20:42.06:1052,42,0	1/1:1,21:22:51.08:1551,51,0	0/0:23,0:23:54.18:0,54,2792	1/1:7,19:26:29.77:594,30,0	0/0:21,0:21:34.35:0,34,1454	0/0:21,0:21:35.28:0,35,1910	0/0:28,0:28:69.21:0,69,3710	0/0:32,0:32:84.27:0,84,4234	0/0:24,0:24:54.15:0,54,2502	0/0:23,0:23:48.16:0,48,2122
chr10	5602627	.	C	CCCTCTT	7367.39	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=-6.601;DP=647;FS=2.294;HRun=0;HaplotypeScore=142.6574;InbreedingCoeff=0.9186;MQ=53.50;MQ0=15;MQRankSum=-8.300;QD=21.80;ReadPosRankSum=-1.154;VQSLOD=4.6733;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:42:19.92:0,20,355	1/1:5,6:12:12.04:379,12,0	0/1:50,0:21:0.91:1,0,87	0/0:44,0:24:18.04:0,18,280	1/1:3,10:14:20.96:478,21,0	1/1:11,15:26:27.09:879,27,0	1/1:9,11:21:14.98:352,15,0	0/0:27,0:27:29.19:0,29,406	1/1:9,15:27:24.08:781,24,0	1/1:6,12:21:38.81:667,39,0	1/1:5,7:14:12.04:227,12,0	1/1:6,13:20:15.05:488,15,0	1/1:8,13:23:27.09:876,27,0	1/1:7,13:22:27.09:871,27,0	0/0:22,0:22:42.13:0,42,810	0/0:19,0:19:26.82:0,27,506	0/0:12,0:24:11:0,11,138	1/1:18,0:19:35.96:566,36,0	0/0:17,0:16:11.98:0,12,205	0/0:22,0:23:27.91:0,28,612	1/1:17,10:33:11.98:241,12,0	0/0:15,0:15:20.95:0,21,380	1/1:4,11:17:14.93:331,15,0	1/1:8,7:18:9.03:232,9,0	0/0:21,0:21:31.92:0,32,672	0/0:27,0:27:57.18:0,57,1083	0/0:18,0:18:39.12:0,39,762	0/0:8,0:9:17.98:0,18,216
chr10	5603145	.	C	CTTT	5773.67	PASS	AB=0.838;AC=44;AF=0.786;AN=56;BaseQRankSum=0.724;DP=570;FS=21.710;HRun=15;HaplotypeScore=102.0192;InbreedingCoeff=0.6825;MQ=67.69;MQ0=7;MQRankSum=-3.425;QD=12.34;ReadPosRankSum=-3.099;VQSLOD=0.2162;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:35:7.81:158,8,0	1/1:3,1:5:7.58:101,8,0	0/0:17,0:12:8.43:0,8,60	0/1:13,0:12:44.60:50,0,45	1/1:11,6:22:32.02:371,32,0	1/1:11,6:21:3.37:343,3,0	1/1:13,7:26:31.73:369,32,0	0/0:23,0:25:21.09:0,21,205	1/1:11,5:16:12.04:188,12,0	1/1:14,6:22:30.84:312,31,0	1/1:11,0:22:26.98:279,27,0	1/1:12,7:21:24:315,24,0	1/1:9,7:19:19.30:233,19,0	1/1:11,11:25:27.78:333,28,0	1/1:6,9:19:20.86:298,21,0	1/1:10,0:17:19.57:235,20,0	0/1:12,1:22:6.61:113,0,7	1/1:8,9:19:20.97:241,21,0	1/1:18,1:22:18.06:287,18,0	1/1:14,6:22:32.23:413,32,0	1/1:9,0:10:4.26:42,4,0	1/1:9,0:14:13.02:101,13,0	1/1:10,8:21:9.03:153,9,0	1/1:8,3:19:26.98:300,27,0	1/1:14,10:27:40.28:538,40,0	0/0:18,0:21:30:0,30,302	0/0:29,0:30:40.66:0,41,384	0/0:8,0:9:16.50:0,17,174
chr10	5603243	.	G	GT	5166.97	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-6.025;DP=507;FS=3.260;HRun=6;HaplotypeScore=50.4960;InbreedingCoeff=0.9963;MQ=69.94;MQ0=0;MQRankSum=-0.345;QD=30.39;ReadPosRankSum=1.708;VQSLOD=5.5150;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:10,22:31:84.20:1012,84,0	0/0:9,0:9:26.92:0,27,253	0/0:17,0:13:35.94:0,36,333	0/0:10,0:9:17.47:0,17,156	0/0:26,0:26:68.95:0,69,666	0/0:13,0:13:39.08:0,39,393	0/0:16,0:16:42.09:0,42,428	1/1:8,12:20:36.03:417,36,0	0/0:16,0:16:48.11:0,48,489	0/0:19,0:19:54.10:0,54,540	0/0:27,0:27:81.17:0,81,820	0/0:16,0:16:45.06:0,45,440	0/0:13,0:13:39.08:0,39,391	0/0:15,0:15:33.07:0,33,337	1/1:2,19:21:51.16:640,51,0	0/0:9,0:9:24.05:0,24,245	1/1:2,17:19:42.13:528,42,0	0/0:16,0:16:39.07:0,39,393	0/0:26,0:26:69.07:0,69,674	0/0:18,0:18:54.12:0,54,550	0/0:14,0:14:39.08:0,39,391	0/0:13,0:13:33.07:0,33,332	0/0:20,0:20:54.12:0,54,551	0/0:24,0:24:69.05:0,69,672	1/1:0,16:16:45.14:566,45,0	1/1:2,18:20:29.98:683,30,0	1/1:1,33:34:87.28:1094,87,0	1/1:2,6:8:18.06:226,18,0
chr10	5603427	.	G	GTTT	1306.51	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=7.448;DP=498;FS=1.811;HRun=1;HaplotypeScore=107.8954;InbreedingCoeff=0.3299;MQ=66.00;MQ0=0;MQRankSum=-2.687;QD=14.36;ReadPosRankSum=1.656;VQSLOD=0.6136;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:90.16:0,90,1007	0/0:6,0:6:18.05:0,18,209	0/0:6,0:6:6.06:0,6,217	0/0:11,0:11:29.90:0,30,422	0/0:34,0:34:86.93:0,87,962	0/0:20,0:20:57.14:0,57,644	0/0:10,0:10:30.09:0,30,358	0/0:36,0:36:99:0,99,1720	0/0:21,0:21:60.12:0,60,676	0/0:28,0:28:84.22:0,84,1058	0/0:27,0:27:81.19:0,81,904	0/0:20,0:20:57.16:0,57,669	0/0:20,0:20:54.13:0,54,622	0/0:15,0:15:45.11:0,45,505	1/1:0,11:13:30.10:585,30,0	0/1:8,0:8:56.05:56,0,69	0/1:19,0:19:99:120,0,124	0/0:16,0:16:45.11:0,45,506	0/1:15,0:15:10.80:11,0,155	0/1:8,0:8:15.05:15,0,32	0/0:14,0:14:36.02:0,36,403	0/1:8,0:8:24.70:28,0,25	0/0:26,0:26:75.19:0,75,899	0/0:7,0:7:21.06:0,21,241	1/1:3,15:20:33.01:643,33,0	0/0:25,0:25:75.25:0,75,1367	0/0:25,0:24:75.24:0,75,1354	0/0:8,0:8:24.08:0,24,447
chr10	5603428	.	G	GT	10200.74	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-4.883;DP=516;FS=6.877;HRun=7;HaplotypeScore=68.9297;InbreedingCoeff=0.9683;MQ=65.71;MQ0=0;MQRankSum=-2.280;QD=25.12;ReadPosRankSum=2.020;VQSLOD=5.6135;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,28:31:90.18:1043,90,0	1/1:0,6:6:18.06:217,18,0	0/0:5,0:5:9.01:0,9,86	0/0:11,0:11:19.36:0,19,155	1/1:4,30:34:84.22:998,84,0	1/1:2,18:20:51.16:616,51,0	1/1:0,10:10:30.09:362,30,0	0/0:35,0:35:84.10:0,84,797	1/1:0,21:21:60.18:725,60,0	1/1:3,25:28:75.23:906,75,0	1/1:5,22:27:69.21:832,69,0	1/1:3,17:20:51.15:607,51,0	1/1:4,17:21:40.14:536,40,0	1/1:1,14:15:42.13:507,42,0	1/1:14,0:14:28.88:145,29,0	1/1:8,0:8:10.93:55,11,0	1/1:5,0:21:42.96:216,43,0	1/1:3,14:17:39.12:471,39,0	1/1:10,0:25:50.41:240,50,0	1/1:4,0:12:14.27:74,14,0	1/1:1,13:14:36.11:433,36,0	1/1:1,0:9:14.42:81,14,0	1/1:7,20:27:34.22:696,34,0	1/1:0,7:7:21.06:254,21,0	1/1:19,0:19:34.25:186,34,0	0/0:26,0:26:75.11:0,75,720	0/0:25,0:24:72.11:0,72,695	0/0:8,0:8:24.04:0,24,232
chr10	5603608	.	CCAAG	C	1052.22	PASS	AC=6;AF=0.111;AN=54;BaseQRankSum=5.161;DP=530;FS=4.235;HRun=0;HaplotypeScore=131.1438;InbreedingCoeff=0.9566;MQ=82.81;MQ0=0;MQRankSum=-6.686;QD=40.47;ReadPosRankSum=-0.700;VQSLOD=3.6334;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:44.33:0,44,1221	0/0:16,0:16:48.16:0,48,1327	0/0:19,0:19:53.84:0,54,1375	0/0:17,0:17:51.11:0,51,1161	0/0:19,0:19:57.20:0,57,1535	0/0:20,0:20:57.19:0,57,1545	0/0:19,0:19:57.20:0,57,1555	0/0:32,0:32:92.99:0,93,1596	0/0:23,0:23:69.24:0,69,1888	0/0:23,0:23:69.23:0,69,1828	0/0:12,0:12:36.12:0,36,949	0/0:31,0:31:93.28:0,93,2329	0/0:30,0:30:90.31:0,90,2477	0/0:18,0:18:54.19:0,54,1468	0/0:20,0:20:57.19:0,57,1056	./.	0/0:30,0:30:90.31:0,90,1703	0/0:20,0:20:54.15:0,54,1377	1/1:1,7:8:18.06:355,18,0	1/1:0,7:7:18.06:358,18,0	0/0:24,0:24:72.25:0,72,1983	1/1:0,11:11:24.08:478,24,0	0/0:9,0:9:27.09:0,27,715	0/0:30,0:30:87.30:0,87,2363	0/0:13,0:13:39.13:0,39,719	0/0:19,0:19:57.18:0,57,970	0/0:29,0:29:84.29:0,84,1556	0/0:2,0:2:6.02:0,6,113
chr10	5604446	.	ATGTG	A	9006.37	PASS	AB=0.903;AC=30;AF=0.556;AN=54;BaseQRankSum=-6.758;DP=881;FS=9.215;HRun=0;HaplotypeScore=204.1044;InbreedingCoeff=0.6407;MQ=54.70;MQ0=20;MQRankSum=3.727;QD=16.05;ReadPosRankSum=5.804;VQSLOD=3.2270;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:22:29.67:0,30,505	0/1:8,13:22:10.83:374,0,11	./.	0/0:47,0:20:6.02:0,6,81	1/1:9,28:38:42.23:614,42,0	1/1:7,18:26:46.39:724,46,0	1/1:16,16:31:26.67:367,27,0	0/0:32,0:30:42.93:0,43,566	1/1:14,26:37:44.64:681,45,0	1/1:12,24:36:44.77:842,45,0	1/1:6,10:16:17.48:237,17,0	1/1:8,22:31:43.67:662,44,0	1/1:7,30:37:48.15:733,48,0	1/1:10,27:36:39.13:613,39,0	0/1:8,0:26:33.66:36,0,34	0/1:25,0:27:45.41:45,0,114	0/0:32,0:31:11.73:0,12,180	1/1:20,3:23:0.71:255,1,0	0/0:18,0:19:22.87:0,23,275	0/0:34,0:34:17.34:0,17,122	1/1:20,46:65:60.31:1293,60,0	0/0:28,0:29:17.26:0,17,99	1/1:8,14:21:21.06:298,21,0	1/1:22,19:41:56.54:1161,57,0	0/1:13,0:36:71.90:72,0,129	0/0:16,0:40:67.88:0,68,1224	0/0:4,0:11:14.84:0,15,223	0/0:11,0:11:13.33:0,13,166
chr10	5604474	.	GTATTTA	G	1060.33	PASS	AB=0.902;AC=8;AF=0.143;AN=56;BaseQRankSum=4.930;DP=932;FS=18.278;HRun=0;HaplotypeScore=264.9375;InbreedingCoeff=0.0643;MQ=49.96;MQ0=29;MQRankSum=-5.372;QD=5.17;ReadPosRankSum=-2.837;VQSLOD=0.8739;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,1:28:39.83:0,40,1308	0/0:18,0:18:33.24:0,33,469	0/0:58,0:20:60.19:0,60,1290	0/0:48,0:14:41.17:0,41,898	0/0:38,0:38:65.43:0,65,1108	0/0:25,0:25:62.98:0,63,1109	0/0:32,0:31:51.05:0,51,1027	0/0:46,0:42:73.70:0,74,2117	0/0:40,0:37:75.25:0,75,1526	0/0:44,0:43:99:0,115,2453	0/0:16,0:15:21.96:0,22,477	0/0:35,0:35:72.23:0,72,1439	0/0:39,0:39:62.88:0,63,1249	0/0:42,0:40:61.07:0,61,1316	0/1:33,0:32:99:170,0,1017	0/1:26,5:30:34.20:182,0,34	0/1:27,2:29:99:167,0,531	0/0:19,0:19:22.80:0,23,733	0/1:19,2:20:99:148,0,563	0/1:20,8:29:56.83:95,0,57	0/0:60,0:59:99:0,120,2037	1/1:22,6:30:4.99:136,5,0	0/0:22,0:21:37.01:0,37,765	0/0:46,0:47:63.88:0,64,1928	0/1:30,0:29:99:297,0,544	0/0:36,0:36:53.97:0,54,2035	0/0:18,0:17:14.86:0,15,720	0/0:12,0:14:38.01:0,38,673
chr10	5604480	.	ATGTGTATATGTGTATGTG	A	731.65	PASS	AB=0.835;AC=6;AF=0.107;AN=56;BaseQRankSum=8.021;DP=945;FS=1.507;HRun=0;HaplotypeScore=423.3390;InbreedingCoeff=0.2273;MQ=50.49;MQ0=29;MQRankSum=-6.453;QD=5.46;ReadPosRankSum=-6.128;VQSLOD=0.2076;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:27:50.86:0,51,2272	0/0:19,0:19:28.56:0,29,1237	0/0:56,0:21:47.14:0,47,1351	0/0:52,0:19:39.13:0,39,1197	0/0:40,0:40:45.29:0,45,2391	0/0:25,0:25:45.12:0,45,1749	0/0:35,0:34:51.07:0,51,2503	0/0:44,0:40:52.62:0,53,2374	0/0:37,0:36:63.16:0,63,2903	0/0:43,0:42:99:0,105,5034	0/0:15,0:14:27.09:0,27,1254	0/0:37,0:37:66.12:0,66,3241	0/0:44,0:44:72.23:0,72,3060	0/0:42,0:41:69.13:0,69,3379	0/0:35,0:34:17.70:0,18,2704	0/1:12,19:31:99:236,0,151	0/0:27,0:26:25.32:0,25,1566	0/1:21,0:21:51.75:52,0,1934	0/1:21,0:17:99:228,0,111	0/1:18,11:29:31.71:223,0,32	0/0:64,0:63:96.29:0,96,3741	1/1:18,13:31:11.89:120,12,0	0/0:23,0:22:45.15:0,45,2082	0/0:48,0:48:99:0,111,5324	0/0:30,0:29:30.10:0,30,1506	0/0:34,0:34:75.26:0,75,3543	0/0:18,0:17:14.38:0,14,1503	0/0:15,0:15:12.86:0,13,1513
chr10	5604484	.	GTATA	G	157.80	PASS	AB=0.916;AC=6;AF=0.107;AN=56;BaseQRankSum=8.668;DP=960;FS=1.869;HRun=0;HaplotypeScore=252.7515;InbreedingCoeff=0.1618;MQ=50.65;MQ0=29;MQRankSum=-5.658;QD=1.23;ReadPosRankSum=-1.771;VQSLOD=2.2999;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:55.52:0,56,1566	0/0:19,0:19:6.23:0,6,709	0/0:58,0:23:69.24:0,69,1774	0/0:55,0:21:63.20:0,63,1582	0/0:41,0:41:70.75:0,71,1859	0/0:27,0:27:69.15:0,69,1671	0/0:34,0:33:66.22:0,66,1735	0/0:50,0:45:95.67:0,96,2902	0/0:36,0:35:78.27:0,78,2087	0/0:43,0:42:99:0,117,3142	0/0:15,0:14:27.09:0,27,712	0/0:36,0:36:75.26:0,75,2001	0/0:44,0:44:81.73:0,82,2130	0/0:41,0:40:81.06:0,81,2095	0/0:36,0:35:51.65:0,52,1427	0/1:28,3:30:26.40:26,0,111	0/1:31,0:30:55.39:55,0,759	0/0:23,1:24:10.28:0,10,1267	0/1:18,2:16:40.69:41,0,565	0/0:21,7:28:0.51:0,1,47	0/0:62,1:62:99:0,129,3237	1/1:25,5:30:7.96:36,8,0	0/0:20,0:19:45.15:0,45,1248	0/0:49,2:51:99:0,120,3186	0/0:26,0:26:36.82:0,37,881	0/0:35,0:35:99:0,99,2529	0/0:20,0:19:33.97:0,34,1005	0/1:13,3:16:99:123,0,1021
chr10	5604547	.	CGT	C	653.65	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.784;DP=1031;FS=2.947;HRun=0;HaplotypeScore=158.3801;InbreedingCoeff=1.0000;MQ=53.78;MQ0=8;MQRankSum=0.198;QD=24.21;ReadPosRankSum=2.585;VQSLOD=4.6819;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:72.05:0,72,1191	0/0:16,0:16:48.16:0,48,823	0/0:55,0:26:55.38:0,55,858	0/0:43,0:30:76.43:0,76,1167	0/0:37,0:37:99:0,105,1766	0/0:23,0:23:66.23:0,66,1125	0/0:28,0:27:60.21:0,60,1020	0/0:51,0:51:99:0,111,1806	0/0:43,0:43:99:0,123,2063	0/0:52,0:52:99:0,150,2516	0/0:29,0:29:84.27:0,84,1396	0/0:46,0:46:99:0,126,2117	0/0:50,0:50:99:0,141,2340	0/0:39,0:39:99:0,102,1635	0/0:34,0:34:99:0,99,1649	0/0:42,0:42:72.25:0,72,1225	1/1:0,27:27:57.17:749,57,0	0/0:35,0:35:84.89:0,85,1477	0/0:22,0:21:45.13:0,45,735	0/0:29,0:29:72.25:0,72,1229	0/0:54,0:53:99:0,135,2196	0/0:38,0:38:91.19:0,91,1539	0/0:28,0:28:75.24:0,75,1258	0/0:59,0:59:99:0,129,2191	0/0:26,0:26:78.27:0,78,1329	0/0:41,0:41:99:0,114,1898	0/0:29,0:29:78.25:0,78,1302	0/0:21,0:21:57.20:0,57,977
chr10	5604691	.	ATG	A	329.98	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.819;DP=882;FS=8.374;HRun=0;HaplotypeScore=230.4061;InbreedingCoeff=0.9956;MQ=50.85;MQ0=13;MQRankSum=1.461;QD=11.79;ReadPosRankSum=1.314;VQSLOD=2.2620;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:32.39:0,32,487	0/0:15,0:15:30.10:0,30,478	0/0:40,0:19:43.86:0,44,589	0/0:31,0:20:36.51:0,37,485	0/0:37,0:37:50.04:0,50,844	0/0:21,0:21:36.12:0,36,600	0/0:22,0:21:27.78:0,28,537	0/0:46,0:44:99:0,112,1561	0/0:33,0:33:63.18:0,63,1003	0/0:43,0:40:99:0,114,1765	0/0:27,0:28:45.12:0,45,710	0/0:46,0:46:90.03:0,90,1465	0/0:38,0:38:65.96:0,66,1055	0/0:24,0:24:50.92:0,51,809	0/0:31,0:31:80.77:0,81,1310	0/0:38,0:38:79.11:0,79,1187	1/1:6,22:24:33.08:425,33,0	0/0:22,0:22:44.15:0,44,601	0/0:17,0:15:36.12:0,36,572	0/0:51,0:51:99:0,132,2223	0/0:35,0:35:49.55:0,50,807	0/0:35,0:35:84.03:0,84,1355	0/0:39,0:39:72.19:0,72,1147	0/0:37,0:37:47.17:0,47,737	0/0:25,0:25:57.19:0,57,958	0/0:28,0:28:69.12:0,69,1063	0/0:29,0:29:63.11:0,63,959	0/0:9,0:9:24.06:0,24,374
chr10	5604725	.	ATGTGTGTATG	A	12053.55	PASS	AB=0.596;AC=36;AF=0.643;AN=56;BaseQRankSum=13.316;DP=805;FS=13.547;HRun=0;HaplotypeScore=265.4102;InbreedingCoeff=0.7891;MQ=49.71;MQ0=15;MQRankSum=-9.330;QD=22.28;ReadPosRankSum=-1.514;VQSLOD=2.4363;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,18:28:4.32:184,4,0	1/1:3,14:17:7.79:179,8,0	0/0:28,0:10:15.01:0,15,356	0/0:19,0:6:15.04:0,15,448	1/1:4,28:32:14.15:375,14,0	1/1:3,17:20:6.02:184,6,0	0/1:4,16:19:0.05:0,0,0	1/1:15,28:41:49.09:1717,49,0	1/1:5,26:31:27.09:820,27,0	1/1:7,27:32:72.22:1905,72,0	1/1:7,17:24:13.31:373,13,0	1/1:9,35:44:36.78:1069,37,0	1/1:6,38:44:27.98:818,28,0	1/1:6,18:24:12.04:369,12,0	0/0:29,0:29:70.81:0,71,3158	0/0:40,2:42:2.80:0,3,4452	0/0:24,0:23:33.56:0,34,1250	0/1:9,12:21:35.05:171,0,35	0/0:17,0:13:24.08:0,24,976	0/0:52,0:52:99:0,143,6525	1/1:23,1:24:19.46:225,19,0	0/0:28,0:28:63.22:0,63,2760	1/1:10,23:33:15.85:442,16,0	1/1:10,22:32:8.11:275,8,0	0/0:25,0:25:39.66:0,40,1854	1/1:7,24:30:69.24:1931,69,0	1/1:7,23:30:21.07:646,21,0	1/1:2,6:8:11.63:368,12,0
chr10	5605985	.	AT	A	23696.37	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-5.711;DP=695;FS=0.673;HRun=2;HaplotypeScore=70.3080;InbreedingCoeff=0.9989;MQ=79.99;MQ0=0;MQRankSum=-9.544;QD=35.85;ReadPosRankSum=5.134;VQSLOD=5.1861;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,45:46:99:1636,126,0	1/1:0,14:14:39.13:506,39,0	0/0:14,0:14:42.12:0,42,563	0/0:20,0:20:54.11:0,54,676	1/1:0,33:33:99:1285,99,0	1/1:0,19:19:54.18:701,54,0	1/1:0,26:26:75.24:974,75,0	1/1:0,32:32:96.27:1213,96,0	1/1:2,27:29:75.24:974,75,0	1/1:0,21:21:63.19:804,63,0	1/1:0,15:15:42.14:545,42,0	1/1:0,29:29:78.25:1013,78,0	1/1:0,27:27:78.25:1013,78,0	1/1:0,23:23:63.20:818,63,0	1/1:2,26:28:72.10:911,72,0	1/1:2,33:35:90.29:1168,90,0	1/1:0,33:33:90.29:1169,90,0	1/1:1,24:25:66.21:857,66,0	1/1:2,18:20:54.14:669,54,0	1/1:0,26:26:66.21:857,66,0	1/1:0,30:30:87.28:1130,87,0	1/1:0,23:23:63.20:818,63,0	1/1:0,16:16:45.15:584,45,0	1/1:0,30:30:87.28:1130,87,0	1/1:0,20:20:54.18:701,54,0	1/1:0,28:28:84.27:1091,84,0	1/1:1,23:24:63.20:818,63,0	1/1:0,9:9:24.08:311,24,0
chr10	5606667	.	A	ATGGTGTG	21654.56	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-6.291;DP=602;FS=1.568;HRun=0;HaplotypeScore=160.5049;InbreedingCoeff=0.9776;MQ=81.04;MQ0=0;MQRankSum=-16.946;QD=71.70;ReadPosRankSum=1.162;VQSLOD=5.1161;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:84.20:0,84,1897	1/1:5,8:13:27.09:1049,27,0	0/0:19,0:19:48.16:0,48,1038	0/0:27,0:27:41.50:0,41,949	1/1:9,5:18:11.73:465,12,0	1/1:9,14:24:63.22:2220,63,0	1/1:13,17:31:72.25:2689,72,0	0/0:23,0:23:48.16:0,48,1163	1/1:10,14:23:54.19:2083,54,0	1/1:10,5:16:45.08:1433,45,0	1/1:8,2:11:8.88:333,9,0	1/1:8,14:25:69.24:2570,69,0	1/1:12,14:26:66.23:2464,66,0	1/1:15,20:36:81.75:2961,82,0	0/0:17,0:17:42.14:0,42,1009	0/0:25,0:25:69.24:0,69,1691	0/0:25,0:25:63.22:0,63,1528	1/1:5,12:17:42.14:1616,42,0	0/0:22,0:22:48.15:0,48,1131	0/0:10,0:10:24.08:0,24,585	1/1:13,8:22:12.04:452,12,0	0/0:18,0:18:33.11:0,33,810	1/1:5,5:13:11.61:423,12,0	1/1:14,11:26:27.09:899,27,0	0/0:17,0:17:45.14:0,45,1060	0/0:23,0:23:54.17:0,54,1286	0/0:21,0:21:54.14:0,54,1293	0/0:9,0:9:24.08:0,24,571
chr10	5606745	.	GAA	G	3704.05	PASS	AB=0.983;AC=38;AF=0.679;AN=56;BaseQRankSum=-3.348;DP=456;FS=27.391;HRun=5;HaplotypeScore=69.3947;InbreedingCoeff=0.3986;MQ=71.52;MQ0=17;MQRankSum=-1.611;QD=10.77;ReadPosRankSum=5.136;VQSLOD=-0.7083;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:40,0:38:11.97:97,12,0	1/1:7,0:6:0.62:79,1,0	0/0:31,0:24:68.84:0,69,649	0/0:28,0:20:53.79:0,54,485	1/1:16,0:16:11.99:103,12,0	1/1:14,1:14:23.54:209,24,0	0/1:17,0:17:42.71:182,0,43	1/1:21,0:20:50.73:417,51,0	0/1:11,0:11:48.22:48,0,63	1/1:10,0:9:9.52:169,10,0	1/1:8,1:9:9.52:108,10,0	0/1:12,0:12:22.51:34,0,23	1/1:11,1:11:29.73:231,30,0	1/1:18,0:17:10.09:139,10,0	1/1:14,0:12:26.50:209,27,0	0/0:20,0:20:50.89:0,51,445	1/1:21,0:20:3:25,3,0	1/1:12,0:12:16.43:168,16,0	0/0:13,0:12:35.96:0,36,315	0/0:9,0:9:27.01:0,27,266	0/1:18,0:17:38.74:188,0,39	0/0:11,0:10:28.21:0,28,310	0/1:16,0:16:23.86:154,0,24	0/1:23,3:26:17.96:291,0,18	1/1:15,0:15:34.54:294,35,0	1/1:15,0:15:43.29:326,43,0	1/1:13,0:11:23.84:177,24,0	1/1:6,0:6:0.77:55,1,0
chr10	5606747	.	AAAAC	A	2912.61	PASS	AB=0.983;AC=29;AF=0.518;AN=56;BaseQRankSum=-4.932;DP=483;FS=20.185;HRun=0;HaplotypeScore=93.4173;InbreedingCoeff=-0.0591;MQ=68.91;MQ0=18;MQRankSum=-1.734;QD=7.85;ReadPosRankSum=6.310;VQSLOD=0.5089;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:5,0:37:12.04:153,12,0	0/1:8,0:7:35.45:35,0,50	0/0:31,0:24:68.84:0,69,649	0/0:26,0:18:53.79:0,54,485	1/1:3,15:18:5.98:185,6,0	0/1:18,0:17:78.16:140,0,78	0/1:17,1:18:99:181,0,142	1/1:22,0:21:50.60:417,51,0	0/1:13,0:12:1.19:1,0,228	0/1:12,0:11:56.82:89,0,57	1/1:8,0:8:9.01:75,9,0	0/1:16,0:16:27.12:27,0,116	0/1:13,0:13:73.14:132,0,73	0/1:17,0:15:23.06:105,0,23	0/1:21,0:19:99:117,0,206	0/0:20,0:20:54.74:0,55,470	1/1:1,21:22:2.97:57,3,0	0/1:12,0:12:32.71:147,0,33	0/0:13,0:12:35.96:0,36,315	0/0:9,0:9:27.03:0,27,321	0/1:20,0:19:99:164,0,188	0/0:13,0:12:33.85:0,34,442	0/1:16,0:16:99:132,0,123	0/1:26,0:26:99:119,0,181	0/1:17,0:17:16.18:214,0,16	1/1:13,0:15:43.33:358,43,0	1/1:13,0:11:22.57:175,23,0	0/1:5,0:6:1.29:68,0,1
chr10	5608128	.	TGTGTGTGTGA	T	586.46	PASS	AB=0.979;AC=12;AF=0.214;AN=56;BaseQRankSum=6.446;DP=548;FS=1.593;HRun=0;HaplotypeScore=175.8504;InbreedingCoeff=0.2126;MQ=68.79;MQ0=12;MQRankSum=-4.727;QD=3.99;ReadPosRankSum=-2.986;VQSLOD=1.6687;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:26.28:0,26,296	0/0:8,0:8:12:0,12,124	0/0:35,0:16:18.91:0,19,172	0/0:41,0:27:17.72:0,18,407	0/0:13,0:13:14.98:0,15,125	0/0:10,0:10:21.82:0,22,238	0/0:32,0:31:32.58:0,33,286	0/0:31,0:30:65.99:0,66,602	0/0:16,0:15:17.96:0,18,178	0/0:21,0:21:50.37:0,50,468	0/0:17,0:16:11.39:0,11,124	0/0:11,0:11:11.43:0,11,221	0/0:20,0:20:20.34:0,20,271	0/0:19,0:19:38.27:0,38,422	0/1:12,0:12:83.14:83,0,111	1/1:3,12:15:2.64:95,3,0	0/1:20,0:20:11.51:12,0,247	0/1:19,0:19:17.54:18,0,416	0/1:12,2:12:28.41:273,0,28	1/1:6,16:22:8.56:84,9,0	0/0:41,0:40:76.43:0,76,625	1/1:0,14:14:2.02:94,2,0	0/0:13,0:13:11.25:0,11,88	0/0:23,0:23:29.93:0,30,295	0/1:18,0:18:69.87:70,0,176	0/1:13,0:12:3.45:3,0,250	0/0:18,0:18:38.75:0,39,313	0/0:9,0:8:2.66:0,3,183
chr10	5608138	.	AGTGTGT	A	2665.03	PASS	AB=0.876;AC=39;AF=0.750;AN=52;BaseQRankSum=-1.524;DP=587;FS=1.358;HRun=0;HaplotypeScore=151.1293;InbreedingCoeff=0.2233;MQ=58.54;MQ0=17;MQRankSum=-0.239;QD=6.60;ReadPosRankSum=1.821;VQSLOD=2.3891;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:16,9:27:4.68:0,5,28	1/1:9,0:9:5.42:26,5,0	./.	./.	1/1:10,6:16:1.44:18,1,0	1/1:9,2:13:8.76:141,9,0	0/0:16,15:31:1.50:0,1,17	0/0:27,0:26:5.94:0,6,41	0/0:10,6:15:0:0,0,0	1/1:15,10:25:12.32:167,12,0	1/1:6,10:15:2.86:20,3,0	1/1:13,2:15:7.38:80,7,0	1/1:8,7:17:12.04:205,12,0	1/1:24,3:27:1.53:280,2,0	1/1:9,0:11:6.02:84,6,0	1/1:14,0:14:1.81:37,2,0	1/1:16,0:17:2.34:40,2,0	0/1:19,3:24:56.24:284,0,56	0/1:14,0:12:9.68:67,0,10	1/1:19,0:19:0.31:1,0,0	1/1:52,0:50:31.11:388,31,0	1/1:18,0:17:3.01:39,3,0	0/0:6,10:17:0.06:0,0,1	1/1:26,1:29:18.28:299,18,0	0/1:12,0:16:9.21:67,0,9	1/1:19,1:20:21.41:225,21,0	1/1:10,6:16:5.62:97,6,0	1/1:9,3:11:14.80:225,15,0
chr10	5611194	.	CT	C	19723.86	PASS	AC=44;AF=0.917;AN=48;BaseQRankSum=-1.028;DP=619;FS=0.000;HRun=2;HaplotypeScore=93.0711;InbreedingCoeff=0.9996;MQ=93.31;MQ0=0;MQRankSum=-11.351;QD=34.91;ReadPosRankSum=6.543;VQSLOD=4.4893;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,53:53:99:1869,144,0	1/1:0,14:14:32.90:428,33,0	0/0:24,0:25:68.42:0,68,957	0/0:29,0:29:72.18:0,72,1000	1/1:0,23:23:66.21:857,66,0	1/1:0,19:19:54.18:701,54,0	1/1:1,26:27:66.21:857,66,0	1/1:2,21:23:63.19:804,63,0	1/1:1,22:23:57.19:740,57,0	1/1:1,34:35:99:1285,99,0	1/1:0,11:11:30.10:385,30,0	1/1:0,21:21:60.20:779,60,0	1/1:2,27:29:75.24:967,75,0	1/1:0,24:24:63.20:817,63,0	1/1:0,21:21:51.16:656,51,0	./.	1/1:0,34:34:99:1285,99,0	1/1:1,23:24:63.20:818,63,0	./.	./.	1/1:0,40:40:99:1402,108,0	./.	1/1:2,24:26:63.20:818,63,0	1/1:0,38:38:99:1363,105,0	1/1:1,22:23:60.19:779,60,0	1/1:0,23:23:69.19:867,69,0	1/1:0,19:19:57.19:740,57,0	1/1:0,15:15:39.13:506,39,0
chr10	5611483	.	C	CGT	460.68	PASS	AB=0.789;AC=3;AF=0.063;AN=48;BaseQRankSum=-1.379;DP=560;FS=18.640;HRun=0;HaplotypeScore=189.1348;InbreedingCoeff=0.8118;MQ=60.40;MQ0=3;MQRankSum=0.671;QD=10.71;ReadPosRankSum=-2.987;VQSLOD=1.2928;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,23:28:21.07:322,21,0	0/0:12,0:12:34.31:0,34,255	0/0:15,0:11:23.21:0,23,323	0/0:19,0:7:14.63:0,15,178	0/0:31,0:31:74.81:0,75,578	0/0:20,0:21:57.04:0,57,437	0/0:38,0:37:86.71:0,87,664	0/0:18,0:18:15.07:0,15,246	0/0:21,0:21:29.64:0,30,417	0/0:31,0:32:85.94:0,86,663	0/0:13,0:13:27.48:0,27,252	0/0:28,0:30:68.55:0,69,565	0/0:31,0:31:43.21:0,43,546	0/0:32,0:32:32.19:0,32,530	0/0:34,0:34:75.56:0,76,601	./.	0/1:11,4:15:0.58:241,0,1	0/0:22,0:22:55.94:0,56,473	./.	./.	0/0:27,0:28:42.98:0,43,332	./.	0/0:24,0:24:50.67:0,51,415	0/0:28,0:27:49.64:0,50,371	0/0:17,0:17:44.67:0,45,377	0/0:19,0:19:30.42:0,30,413	0/0:22,0:23:49.79:0,50,411	0/0:9,0:9:27:0,27,245
chr10	5611523	.	TC	T	998.61	PASS	AB=0.761;AC=13;AF=0.271;AN=48;BaseQRankSum=10.729;DP=639;FS=8.035;HRun=1;HaplotypeScore=273.3082;InbreedingCoeff=-0.4016;MQ=45.04;MQ0=25;MQRankSum=1.013;QD=2.68;ReadPosRankSum=3.536;VQSLOD=-0.7260;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:45:45:0,45,448	0/1:6,2:8:9.39:9,0,74	0/0:15,0:2:3.01:0,3,33	0/0:21,0:3:9.03:0,9,114	0/0:16,9:25:14.28:0,14,332	0/1:15,5:19:62.56:63,0,92	0/1:23,6:28:99:105,0,105	0/0:42,0:37:98.37:0,98,1181	0/1:15,11:27:52.97:53,0,148	0/1:21,11:32:99:113,0,139	0/0:14,4:19:10.13:0,10,82	0/1:13,17:30:87.31:87,0,128	0/1:16,11:28:48.54:49,0,159	0/1:19,12:31:88.45:137,0,88	0/1:24,9:34:40.45:175,0,40	./.	0/0:10,0:10:17.59:0,18,115	0/0:19,4:22:4.34:0,4,274	./.	./.	0/1:28,5:33:99:114,0,101	./.	0/1:19,9:28:93.35:93,0,100	0/1:32,12:41:99:105,0,199	0/1:20,5:23:36.75:37,0,128	0/0:22,0:21:60.16:0,60,811	0/0:26,0:26:53.79:0,54,683	0/0:13,0:12:24.04:0,24,299
chr10	5611525	.	TC	T	900.70	PASS	AB=0.775;AC=12;AF=0.250;AN=48;BaseQRankSum=9.935;DP=642;FS=6.584;HRun=1;HaplotypeScore=277.5789;InbreedingCoeff=-0.3218;MQ=45.01;MQ0=25;MQRankSum=1.106;QD=2.68;ReadPosRankSum=2.567;VQSLOD=-0.5766;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:47:46.28:0,46,401	0/1:6,2:8:9.11:9,0,79	0/0:17,0:4:6.47:0,6,53	0/0:23,0:3:9.03:0,9,114	0/1:16,9:25:2.48:2,0,271	0/1:15,5:19:62.61:63,0,94	0/1:24,6:28:96.80:105,0,97	0/0:41,0:37:99:0,101,1058	0/1:17,11:28:84.12:84,0,193	0/1:21,11:32:99:114,0,114	0/0:13,4:17:9.87:0,10,88	0/1:18,16:33:95.68:145,0,96	0/0:16,11:27:8.39:0,8,172	0/1:19,12:30:99:139,0,100	0/0:35,0:35:50.42:0,50,386	./.	0/0:9,0:9:13.17:0,13,112	0/1:18,4:21:1.37:1,0,242	./.	./.	0/1:28,5:33:65.67:136,0,66	./.	0/1:21,9:29:74.65:131,0,75	0/1:31,12:40:99:105,0,181	0/0:25,0:23:38.42:0,38,352	0/0:23,0:22:62.63:0,63,760	0/0:26,0:26:54.06:0,54,606	0/0:11,0:10:18.02:0,18,199
chr10	5611542	.	ATG	A	271.52	PASS	AB=0.969;AC=9;AF=0.188;AN=48;BaseQRankSum=2.219;DP=661;FS=13.451;HRun=0;HaplotypeScore=313.3737;InbreedingCoeff=0.1903;MQ=44.47;MQ0=17;MQRankSum=-7.077;QD=1.55;ReadPosRankSum=1.131;VQSLOD=0.9894;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:39.38:0,39,334	0/1:8,0:8:0.56:1,0,104	0/0:34,0:7:17.32:0,17,160	0/0:38,0:7:17.99:0,18,208	0/0:18,1:19:17.81:0,18,235	0/0:20,0:19:33.16:0,33,257	0/0:32,1:33:44.61:0,45,355	0/1:35,0:33:90.94:91,0,104	0/0:27,1:28:18.17:0,18,332	0/1:32,0:32:14.03:14,0,257	0/0:17,1:18:23.59:0,24,183	0/0:38,0:38:19.59:0,20,396	0/0:28,0:28:25.11:0,25,293	0/0:30,0:30:19.44:0,19,228	0/1:33,1:34:53.49:53,0,68	./.	1/1:7,6:13:17.68:178,18,0	0/0:22,0:21:40.18:0,40,324	./.	./.	0/0:40,0:39:60.72:0,61,452	./.	0/0:28,0:28:34.20:0,34,268	0/0:43,0:43:47.87:0,48,519	0/1:18,1:18:0.87:48,0,1	0/1:24,1:25:1.52:2,0,250	0/0:23,0:23:34.84:0,35,294	0/1:8,1:8:13.58:14,0,29
chr10	5613837	.	A	ACA	1424.23	PASS	AB=1.000;AC=38;AF=0.864;AN=44;BaseQRankSum=-1.587;DP=419;FS=0.000;HRun=0;HaplotypeScore=92.8229;InbreedingCoeff=0.1607;MQ=44.92;MQ0=30;MQRankSum=-0.928;QD=4.12;ReadPosRankSum=2.072;VQSLOD=2.3424;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:36:27.73:0,28,215	1/1:6,0:6:6.81:41,7,0	./.	./.	0/1:12,0:12:12.38:60,0,12	1/1:12,0:11:2.81:21,3,0	1/1:18,0:15:8.93:67,9,0	0/1:16,0:15:0:0,0,0	1/1:13,0:11:3.87:24,4,0	1/1:24,0:24:17.93:148,18,0	1/1:9,0:8:5.98:46,6,0	1/1:18,0:18:14.84:108,15,0	1/1:8,0:8:2.99:25,3,0	1/1:14,0:14:11.92:90,12,0	0/1:17,0:14:0.43:98,0,0	./.	1/1:25,0:22:0.79:81,1,0	1/1:24,0:22:7.63:145,8,0	./.	./.	1/1:26,0:22:17.94:141,18,0	./.	1/1:16,5:22:5.99:48,6,0	1/1:24,0:21:17.95:142,18,0	0/1:20,0:19:55.07:56,0,55	1/1:18,0:17:8.88:62,9,0	1/1:15,0:14:14.91:112,15,0	1/1:4,0:3:2.98:24,3,0
chr10	5613864	.	CAGAGAGAGAGAGAGAGAGAGAGAG	C	823.04	PASS	AB=0.773;AC=3;AF=0.071;AN=42;BaseQRankSum=4.123;DP=402;FS=4.835;HRun=0;HaplotypeScore=231.6952;InbreedingCoeff=0.2375;MQ=40.69;MQ0=28;MQRankSum=1.105;QD=20.07;ReadPosRankSum=-2.721;VQSLOD=2.1568;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:29:41.98:0,42,3064	0/0:7,0:7:11.25:0,11,718	./.	./.	0/0:13,0:13:6.49:0,6,166	0/0:20,0:19:8.86:0,9,372	0/0:24,0:20:12.51:0,13,1012	1/1:18,6:22:0.04:138,0,0	0/0:13,0:10:18.06:0,18,1548	0/0:25,0:24:57.17:0,57,3921	./.	0/0:18,0:18:17.93:0,18,1498	0/0:9,0:9:11.78:0,12,339	0/0:14,0:14:18.06:0,18,1539	0/0:18,0:16:17.16:0,17,1138	./.	0/0:23,0:20:27.56:0,28,2018	0/0:22,0:20:36.12:0,36,2782	./.	./.	0/0:21,0:17:15.42:0,15,768	./.	0/0:23,0:23:9.03:0,9,743	0/0:23,0:21:24.55:0,25,1949	0/0:21,0:20:11.94:0,12,807	0/1:12,5:16:76.30:770,0,76	0/0:16,0:14:1.97:0,2,8	0/0:6,0:5:11.01:0,11,66
chr10	5614924	.	AGAGG	A	308.31	PASS	AC=4;AF=0.077;AN=52;BaseQRankSum=3.655;DP=247;FS=10.692;HRun=0;HaplotypeScore=46.9821;InbreedingCoeff=0.6459;MQ=96.67;MQ0=2;MQRankSum=0.582;QD=22.02;ReadPosRankSum=0.282;VQSLOD=1.4412;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:45.15:0,45,1142	0/0:3,0:3:6.02:0,6,117	0/0:33,0:20:24.23:0,24,543	0/0:29,0:25:9.48:0,9,496	0/0:7,0:7:15.05:0,15,381	0/0:6,0:6:15.04:0,15,330	0/0:6,0:6:18.05:0,18,406	0/0:9,0:9:21.07:0,21,447	0/0:11,0:11:21.07:0,21,498	0/0:7,0:7:12.04:0,12,305	0/0:6,0:6:12.04:0,12,296	0/0:2,0:2:6.02:0,6,152	0/0:10,0:10:15.05:0,15,381	0/0:8,0:8:18.01:0,18,315	1/1:2,5:7:12.04:209,12,0	0/0:5,0:5:9.03:0,9,228	1/1:1,6:7:12.04:209,12,0	0/0:8,0:8:15.05:0,15,380	0/0:7,0:7:15.05:0,15,344	0/0:3,0:3:6.02:0,6,85	0/0:11,0:11:24.08:0,24,610	0/0:7,0:7:15.05:0,15,376	0/0:5,0:5:9.03:0,9,228	0/0:16,0:16:39.08:0,39,848	./.	0/0:3,0:3:3.01:0,3,76	0/0:8,0:8:18.06:0,18,451	./.
chr10	5615822	.	CA	C	15600.06	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=17.908;DP=664;FS=5.846;HRun=4;HaplotypeScore=181.6332;InbreedingCoeff=0.9992;MQ=72.56;MQ0=4;MQRankSum=-8.894;QD=31.58;ReadPosRankSum=4.306;VQSLOD=2.9499;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,32:36:93.29:1113,93,0	1/1:0,11:11:33.10:395,33,0	0/0:22,0:22:66.18:0,66,871	0/0:27,0:27:68.83:0,69,931	1/1:0,26:26:66.20:790,66,0	1/1:1,15:16:45.14:538,45,0	1/1:7,24:31:71.14:905,71,0	1/1:3,31:34:90.28:1077,90,0	1/1:1,28:28:78.24:934,78,0	1/1:1,23:24:69.13:806,69,0	1/1:2,16:18:48.15:575,48,0	1/1:2,18:20:54.17:647,54,0	1/1:3,19:22:57.17:682,57,0	1/1:2,21:22:60.18:719,60,0	1/1:3,25:28:75.20:884,75,0	0/0:23,0:23:60.20:0,60,840	0/0:34,0:34:96.32:0,96,1344	1/1:0,25:25:75.23:899,75,0	0/0:19,0:19:54.18:0,54,755	0/0:28,0:28:84.26:0,84,1137	1/1:1,17:18:42.13:503,42,0	0/0:17,0:17:51.11:0,51,657	1/1:0,11:10:21.06:251,21,0	1/1:0,32:31:72.21:863,72,0	1/1:4,26:30:75.23:897,75,0	1/1:0,30:30:90.28:1077,90,0	1/1:0,19:19:54.17:647,54,0	1/1:0,11:11:33.10:396,33,0
chr10	5617259	.	T	TAGAG	41464.24	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-1.039;DP=630;FS=12.351;HRun=0;HaplotypeScore=127.7118;InbreedingCoeff=0.8573;MQ=64.86;MQ0=0;MQRankSum=-4.840;QD=67.97;ReadPosRankSum=3.558;VQSLOD=6.8654;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,17:28:48.11:1305,48,0	1/1:1,8:10:24.08:654,24,0	0/0:12,0:12:11.40:0,11,212	0/0:8,0:8:2.73:0,3,76	1/1:3,37:42:99:2826,105,0	1/1:1,21:26:57.18:1545,57,0	1/1:1,5:7:12.04:328,12,0	1/1:9,16:32:74.95:1587,75,0	1/1:2,18:20:51.18:1386,51,0	1/1:1,26:29:87.26:2234,87,0	1/1:2,11:12:39.13:1037,39,0	1/1:1,14:15:42.13:1132,42,0	1/1:1,13:17:32.67:892,33,0	1/1:5,18:25:63.20:1691,63,0	1/1:1,25:28:78.27:2110,78,0	1/1:0,19:20:54.19:1463,54,0	1/1:3,23:28:72.25:1959,72,0	1/1:0,23:23:63.22:1718,63,0	1/1:2,15:20:57.19:1509,57,0	1/1:2,28:31:81.28:2195,81,0	1/1:0,11:13:30.10:811,30,0	1/1:2,23:26:72.24:1946,72,0	1/1:5,25:30:75.26:2018,75,0	1/1:2,5:8:21.07:537,21,0	1/1:1,34:37:96.33:2603,96,0	1/1:0,30:34:99:2601,102,0	1/1:2,25:29:72.25:1909,72,0	1/1:0,18:18:54.19:1469,54,0
chr10	5617674	.	CCCAGCACCCCT	C	9376.21	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=14.622;DP=693;FS=15.729;HRun=0;HaplotypeScore=229.8740;InbreedingCoeff=0.9987;MQ=85.72;MQ0=0;MQRankSum=-14.368;QD=65.11;ReadPosRankSum=2.052;VQSLOD=3.4184;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,120,6140	0/0:11,0:11:27.08:0,27,1339	0/0:22,0:22:60.19:0,60,2698	0/0:29,0:29:75.22:0,75,3265	0/0:16,0:16:39.13:0,39,2224	0/0:18,0:18:54.19:0,54,2988	0/0:29,0:29:81.28:0,81,4551	0/0:26,0:26:72.23:0,72,3549	0/0:28,0:28:84.27:0,84,4396	0/0:21,0:21:60.21:0,60,3350	0/0:20,0:20:51.18:0,51,2666	0/0:29,0:29:87.30:0,87,4747	0/0:29,0:29:87.30:0,87,4899	0/0:44,0:44:99:0,126,6569	1/1:4,20:24:54.18:1707,54,0	1/1:3,21:24:57.19:1739,57,0	1/1:6,16:22:39.13:1342,39,0	0/0:38,0:38:99:0,111,6100	1/1:6,10:16:30.10:1036,30,0	1/1:2,20:22:51.18:1749,51,0	0/0:47,0:47:99:0,138,7799	1/1:4,19:23:30.10:932,30,0	0/0:15,0:15:42.14:0,42,2235	0/0:43,0:43:99:0,126,6987	1/1:3,10:13:30.10:873,30,0	0/0:22,0:22:63.20:0,63,3178	0/0:12,0:12:36.10:0,36,1785	0/0:7,0:7:21.07:0,21,1202
chr10	5618036	.	CT	C	12540.87	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=14.796;DP=547;FS=2.010;HRun=1;HaplotypeScore=113.2700;InbreedingCoeff=0.9991;MQ=75.30;MQ0=0;MQRankSum=-3.355;QD=33.80;ReadPosRankSum=6.294;VQSLOD=4.3454;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,29:29:72.24:1001,72,0	1/1:0,12:12:33.11:458,33,0	0/0:17,0:17:24.80:0,25,559	0/0:22,0:22:55.27:0,55,592	1/1:0,15:15:39.09:509,39,0	1/1:0,20:20:51.13:680,51,0	1/1:0,16:16:30.10:408,30,0	1/1:1,15:16:41.65:471,42,0	1/1:0,13:13:27.02:341,27,0	1/1:0,16:16:48.16:664,48,0	1/1:0,19:19:54.18:744,54,0	1/1:0,27:26:69.23:953,69,0	1/1:1,24:25:69.16:928,69,0	1/1:0,18:18:42.14:583,42,0	0/0:12,0:12:36.12:0,36,574	0/0:16,0:16:48.16:0,48,761	0/0:31,0:31:90.31:0,90,1432	1/1:0,27:27:66.22:918,66,0	0/0:10,0:9:27.08:0,27,403	0/0:26,0:26:69.17:0,69,1045	1/1:0,16:16:30.10:411,30,0	0/0:19,0:19:57.18:0,57,873	1/1:0,18:18:39.13:535,39,0	1/1:0,29:29:66.22:917,66,0	0/0:23,0:23:69.14:0,69,1016	1/1:0,17:17:51.15:693,51,0	1/1:0,25:25:63.21:861,63,0	1/1:0,13:13:36.05:466,36,0
chr10	5618181	.	CA	C	1614.16	PASS	AB=0.709;AC=31;AF=0.554;AN=56;BaseQRankSum=-1.217;DP=593;FS=0.000;HRun=17;HaplotypeScore=102.0665;InbreedingCoeff=0.1897;MQ=64.28;MQ0=4;MQRankSum=0.647;QD=3.85;ReadPosRankSum=6.372;VQSLOD=0.5545;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,0:12:18.31:52,18,0	1/1:2,3:6:7.86:39,8,0	0/0:36,0:19:3.83:0,4,66	0/0:20,0:10:5.68:0,6,33	0/1:13,10:27:92.93:93,0,96	0/1:8,8:17:19.43:94,0,19	1/1:5,16:23:35.28:260,35,0	1/1:12,1:27:34.69:108,35,0	0/1:14,10:26:16.72:56,0,17	0/1:11,5:19:32.55:33,0,48	0/1:5,5:12:7.64:56,0,8	0/1:15,9:23:19.45:76,0,19	0/1:21,6:27:33.95:73,0,34	0/1:9,2:12:5.67:51,0,6	0/1:11,6:17:26.65:49,0,27	0/0:21,0:21:37.14:0,37,205	0/0:17,0:16:29.32:0,29,149	1/1:10,13:25:7.08:143,7,0	0/0:26,0:25:37.51:0,38,202	0/0:26,0:25:32.54:0,33,151	0/1:7,3:13:1.89:53,0,2	0/0:14,0:26:45.84:0,46,229	1/1:10,14:28:22.51:182,23,0	0/1:14,11:28:30.51:111,0,31	1/1:7,8:18:20.31:100,20,0	1/1:9,1:24:26.70:85,27,0	1/1:5,0:14:12.08:35,12,0	1/1:9,1:16:16.28:54,16,0
chr10	5618544	.	CAT	C	6739.53	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=14.361;DP=351;FS=33.077;HRun=0;HaplotypeScore=110.6468;InbreedingCoeff=0.9708;MQ=84.55;MQ0=0;MQRankSum=-13.840;QD=31.94;ReadPosRankSum=0.583;VQSLOD=3.7027;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,21:22:39.13:560,39,0	1/1:1,4:5:15.05:217,15,0	0/0:17,1:18:17.24:0,17,691	0/0:16,0:16:41.97:0,42,601	1/1:1,19:20:32.99:467,33,0	1/1:0,8:8:24.08:353,24,0	1/1:3,6:9:15.05:221,15,0	1/1:1,15:16:45.15:662,45,0	1/1:1,10:11:33.11:476,33,0	1/1:0,13:13:36.12:529,36,0	1/1:1,12:13:27.09:379,27,0	1/1:0,7:7:18.06:265,18,0	1/1:1,9:10:21.07:308,21,0	1/1:0,6:6:15.05:220,15,0	0/0:18,0:18:54.17:0,54,979	0/0:16,0:16:48.16:0,48,898	0/0:20,0:20:57.19:0,57,1041	1/1:0,6:6:12.04:176,12,0	0/0:17,0:17:45.11:0,45,797	0/0:9,0:9:24.08:0,24,449	1/1:1,10:11:12.02:176,12,0	0/0:11,0:11:30.10:0,30,562	1/1:2,15:17:39.13:555,39,0	1/1:0,7:7:15.05:205,15,0	0/0:15,0:15:45.15:0,45,831	1/1:1,13:14:33.11:485,33,0	1/1:3,9:12:21.07:309,21,0	1/1:0,4:4:12.04:177,12,0
chr10	5618582	.	T	TG	884.40	PASS	AC=16;AF=0.471;AN=34;BaseQRankSum=7.440;DP=275;FS=4.328;HRun=3;HaplotypeScore=82.5414;InbreedingCoeff=0.8344;MQ=69.74;MQ0=0;MQRankSum=-7.231;QD=20.10;ReadPosRankSum=0.399;VQSLOD=3.2602;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	1/1:0,4:4:3.01:42,3,0	0/0:14,0:13:36.11:0,36,432	0/0:27,0:23:69.20:0,69,812	./.	./.	1/1:2,2:4:3.01:42,3,0	1/1:2,3:5:9.03:126,9,0	1/1:0,8:8:3.01:42,3,0	1/1:1,8:9:24.08:335,24,0	./.	./.	./.	./.	0/0:14,0:14:39.12:0,39,468	0/0:11,0:11:33.10:0,33,396	0/0:18,0:17:48.15:0,48,576	1/1:1,4:5:9.02:111,9,0	0/0:27,0:27:69.21:0,69,828	0/0:13,0:11:24.07:0,24,288	./.	0/0:8,0:8:21.06:0,21,252	./.	./.	0/0:13,0:13:33.09:0,33,386	1/1:0,6:6:15.05:210,15,0	./.	1/1:0,3:3:9.03:126,9,0
chr10	5618658	.	A	ATAG	222.63	PASS	AC=10;AF=0.417;AN=24;BaseQRankSum=4.096;DP=175;FS=7.385;HRun=0;HaplotypeScore=42.6015;InbreedingCoeff=0.7269;MQ=34.73;MQ0=61;MQRankSum=-3.378;QD=17.13;ReadPosRankSum=1.069;VQSLOD=2.0628;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	1/1:0,1:1:3.01:73,3,0	./.	./.	./.	./.	./.	./.	./.	./.	1/1:1,2:2:6.02:70,6,0	./.	1/1:1,1:1:3.01:38,3,0	./.	0/0:11,0:6:9.03:0,9,160	0/0:14,0:14:33.11:0,33,606	0/0:36,0:24:48.16:0,48,875	./.	0/0:16,0:15:42.08:0,42,714	0/0:17,0:15:45.14:0,45,801	./.	0/0:8,0:8:24.08:0,24,446	1/1:0,2:2:6.02:108,6,0	./.	0/0:19,0:17:39.01:0,39,663	1/1:4,1:1:3.01:44,3,0	./.	./.
chr10	5618669	.	CACA	C	153.19	PASS	AC=8;AF=0.364;AN=22;BaseQRankSum=3.717;DP=166;FS=2.375;HRun=0;HaplotypeScore=44.2913;InbreedingCoeff=0.6809;MQ=33.22;MQ0=62;MQRankSum=-2.266;QD=12.77;ReadPosRankSum=1.272;VQSLOD=2.5850;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	1/1:1,2:2:6.02:102,6,0	./.	1/1:1,1:1:3.01:51,3,0	./.	0/0:8,0:3:3:0,3,25	0/0:12,0:12:27.09:0,27,621	0/0:35,0:24:48.08:0,48,1006	./.	0/0:14,0:13:39.13:0,39,899	0/0:17,0:15:45.15:0,45,1036	./.	0/0:8,0:8:24.08:0,24,553	1/1:0,1:1:3.01:51,3,0	./.	0/0:18,0:16:39.05:0,39,827	1/1:5,1:1:3.01:51,3,0	./.	./.
chr10	5618766	.	TAAA	T	504.16	PASS	AB=1.000;AC=5;AF=0.278;AN=18;BaseQRankSum=-5.319;DP=101;FS=0.000;HRun=12;HaplotypeScore=48.1376;MQ=68.56;MQ0=2;MQRankSum=-0.240;QD=12.93;ReadPosRankSum=0.286;VQSLOD=0.0488;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/1:18,0:4:5.95:6,0,35	0/0:10,0:2:6.02:0,6,93	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	1/1:2,6:8:18.04:218,18,0	0/0:4,0:4:12.04:0,12,206	0/0:25,0:25:66.22:0,66,1215	./.	0/0:15,0:15:36.59:0,37,641	0/0:4,0:4:12.04:0,12,225	./.	0/0:1,0:1:3.01:0,3,59	./.	./.	1/1:3,10:13:30.09:379,30,0	./.	./.	./.
chr10	5618991	.	AT	A	7602.67	PASS	AB=0.942;AC=32;AF=0.571;AN=56;BaseQRankSum=4.316;DP=522;FS=17.077;HRun=5;HaplotypeScore=113.2354;InbreedingCoeff=0.7102;MQ=66.76;MQ0=1;MQRankSum=-0.269;QD=22.69;ReadPosRankSum=0.956;VQSLOD=3.3312;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:87.71:0,88,408	1/1:0,5:5:12.03:136,12,0	0/0:17,0:16:17.85:0,18,203	0/0:8,0:6:14.07:0,14,152	1/1:0,24:24:63.14:699,63,0	1/1:0,20:20:48.14:543,48,0	1/1:0,12:12:36.10:408,36,0	0/1:22,1:23:32.78:33,0,126	1/1:0,16:16:45.13:510,45,0	1/1:1,27:28:78.14:858,78,0	1/1:2,17:19:48.09:529,48,0	1/1:0,20:20:48.13:538,48,0	1/1:1,8:9:21.06:238,21,0	1/1:2,16:18:48.10:529,48,0	0/0:16,0:16:48.06:0,48,601	0/1:8,1:9:6.92:7,0,299	0/0:35,0:35:96.26:0,96,1244	1/1:0,24:24:66.19:747,66,0	0/0:15,0:15:33.09:0,33,423	0/0:16,0:16:45.15:0,45,615	1/1:1,13:14:36.05:393,36,0	0/0:5,0:5:15.04:0,15,188	1/1:1,25:26:69.11:751,69,0	1/1:1,20:21:54.15:610,54,0	0/0:24,0:24:72.23:0,72,970	0/1:18,2:20:44.11:44,0,138	0/1:27,0:27:28.31:28,0,187	0/0:17,0:17:43.40:0,43,195
chr10	5620029	.	ACAT	A	2090.26	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=4.688;DP=671;FS=0.573;HRun=0;HaplotypeScore=104.0666;InbreedingCoeff=0.9998;MQ=89.83;MQ0=0;MQRankSum=-3.988;QD=44.47;ReadPosRankSum=1.697;VQSLOD=4.9619;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:72.25:0,72,1623	0/0:13,0:13:39.13:0,39,870	0/0:33,0:33:99:0,99,2163	0/0:18,0:18:54.18:0,54,1165	0/0:19,0:19:57.20:0,57,1285	0/0:26,0:26:78.27:0,78,1789	0/0:23,0:23:69.20:0,69,1495	0/0:30,0:30:87.30:0,87,1953	0/0:20,0:20:54.17:0,54,1175	0/0:30,0:30:84.28:0,84,1840	0/0:21,0:21:63.22:0,63,1402	0/0:26,0:26:75.26:0,75,1709	0/0:26,0:26:75.26:0,75,1706	0/0:23,0:23:66.21:0,66,1445	1/1:1,26:27:75.26:1256,75,0	0/0:22,0:22:66.23:0,66,1522	0/0:32,0:32:96.33:0,96,2158	0/0:25,0:25:69.16:0,69,1433	0/0:20,0:20:60.21:0,60,1324	0/0:27,0:27:75.26:0,75,1692	0/0:38,0:38:99:0,111,2512	0/0:16,0:16:48.16:0,48,1101	0/0:27,0:27:78.27:0,78,1788	0/0:16,0:16:48.16:0,48,1107	1/1:1,19:20:57.19:956,57,0	0/0:26,0:26:78.27:0,78,1796	0/0:32,0:32:96.33:0,96,2213	0/0:11,0:11:33.11:0,33,761
chr10	5621800	.	TA	T	10346.19	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=9.981;DP=578;FS=2.155;HRun=1;HaplotypeScore=63.1229;InbreedingCoeff=0.9987;MQ=68.23;MQ0=0;MQRankSum=-1.819;QD=38.90;ReadPosRankSum=2.749;VQSLOD=5.5799;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:69.24:0,69,1098	1/1:0,6:6:18.06:252,18,0	0/0:18,0:17:51.02:0,51,742	0/0:12,0:12:29.01:0,29,445	1/1:0,22:21:54.08:755,54,0	1/1:0,22:22:63.21:881,63,0	1/1:0,17:17:45.15:629,45,0	0/0:33,0:33:99:0,99,1561	1/1:0,25:25:69.23:965,69,0	1/1:1,28:29:87.25:1173,87,0	1/1:0,16:16:45.15:624,45,0	1/1:0,22:22:57.19:797,57,0	1/1:1,16:17:48.16:663,48,0	1/1:0,20:20:60.20:839,60,0	0/0:20,0:20:60.20:0,60,957	0/0:19,0:19:57.19:0,57,911	0/0:24,0:24:66.20:0,66,1029	1/1:0,16:16:48.16:671,48,0	0/0:11,0:11:33.11:0,33,528	0/0:35,0:35:99:0,105,1649	1/1:0,11:11:33.11:462,33,0	0/0:21,0:21:63.21:0,63,1004	1/1:1,23:24:63.21:880,63,0	1/1:0,19:19:54.18:755,54,0	0/0:33,0:32:99:0,99,1556	0/0:26,0:26:78.26:0,78,1225	0/0:19,0:19:57.19:0,57,911	0/0:18,0:18:51.17:0,51,815
chr10	5621870	.	CT	C	5646.56	PASS	AB=0.667;AC=22;AF=0.393;AN=56;BaseQRankSum=5.475;DP=666;FS=14.035;HRun=10;HaplotypeScore=80.5521;InbreedingCoeff=0.8715;MQ=70.69;MQ0=0;MQRankSum=-0.110;QD=20.84;ReadPosRankSum=0.613;VQSLOD=4.5191;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:90.22:0,90,979	0/0:11,1:12:7.04:0,7,306	0/1:8,4:12:80.12:80,0,102	0/0:16,1:17:12.73:0,13,331	0/0:38,1:38:55.63:0,56,1020	0/0:33,1:34:57.84:0,58,847	0/0:24,1:25:43.13:0,43,704	1/1:4,24:28:68.93:589,69,0	0/0:23,0:23:63.15:0,63,685	0/0:34,0:34:78.21:0,78,858	0/0:19,1:20:26.90:0,27,446	0/0:17,0:17:30.08:0,30,332	0/0:21,1:23:26.10:0,26,559	0/0:22,1:23:34.10:0,34,578	1/1:0,20:20:59.99:521,60,0	0/1:4,10:14:0.16:227,0,0	1/1:3,28:31:80.98:703,81,0	0/0:23,0:23:57.09:0,57,601	1/1:2,24:26:71.96:618,72,0	1/1:6,25:31:74.75:625,75,0	0/0:13,0:13:36.10:0,36,398	1/1:4,20:24:53.87:459,54,0	0/0:30,1:31:49.14:0,49,763	0/0:26,1:29:54.05:0,54,845	1/1:2,24:26:71.98:625,72,0	1/1:2,24:27:43.04:574,43,0	1/1:5,18:23:47.98:417,48,0	1/1:0,9:9:24:208,24,0
chr10	5622623	.	A	AC	4348.03	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=4.664;DP=684;FS=9.517;HRun=6;HaplotypeScore=108.3146;InbreedingCoeff=0.9961;MQ=94.96;MQ0=0;MQRankSum=-4.526;QD=26.51;ReadPosRankSum=0.909;VQSLOD=4.0939;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:45:95.31:0,95,1131	0/0:14,0:14:33.05:0,33,329	0/0:35,0:35:75.12:0,75,746	0/0:29,0:29:68.25:0,68,663	0/0:21,0:21:45.03:0,45,440	0/0:21,0:21:19.18:0,19,370	0/0:26,0:26:69.13:0,69,695	0/0:30,0:30:81.12:0,81,800	0/0:19,0:20:54.12:0,54,551	0/0:26,0:26:57.07:0,57,569	0/0:11,0:11:24.05:0,24,245	0/0:26,0:26:63.11:0,63,635	0/0:37,0:37:96.21:0,96,978	0/0:21,0:21:57.12:0,57,581	1/1:1,24:25:57.18:717,57,0	1/1:2,17:19:20.55:573,21,0	1/1:4,29:33:81.26:1019,81,0	0/0:27,0:27:63.13:0,63,641	1/1:6,12:18:39.07:455,39,0	1/1:4,21:25:45.10:548,45,0	0/0:28,0:28:69.14:0,69,703	1/1:5,17:22:39.04:470,39,0	0/0:22,0:22:39.50:0,39,379	0/0:18,0:18:48.09:0,48,482	1/1:0,22:22:45.14:566,45,0	0/0:24,0:24:42.04:0,42,417	0/0:32,0:32:81.12:0,81,807	0/0:6,0:6:18.02:0,18,176
chr10	5624350	.	TGC	T	3178.60	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=2.554;DP=347;FS=5.705;HRun=0;HaplotypeScore=73.8922;InbreedingCoeff=0.9137;MQ=66.23;MQ0=3;MQRankSum=-1.156;QD=24.64;ReadPosRankSum=0.764;VQSLOD=4.1703;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,11:17:12.36:126,12,0	1/1:4,1:5:12:142,12,0	0/0:14,0:7:16.20:0,16,165	0/0:18,0:6:8.85:0,9,133	1/1:0,13:13:17.99:262,18,0	1/1:3,9:12:27.06:388,27,0	1/1:2,2:4:9.02:117,9,0	0/0:35,0:36:82.52:0,83,1849	0/0:8,0:8:21.06:0,21,379	1/1:0,12:12:36:499,36,0	1/1:0,14:14:15.05:244,15,0	1/1:0,3:3:9.03:147,9,0	1/1:4,3:7:15.04:218,15,0	1/1:0,4:4:9.03:147,9,0	0/0:10,0:10:24.08:0,24,485	0/0:8,0:8:24.07:0,24,417	0/0:21,0:21:54.13:0,54,984	1/1:0,13:13:30.10:477,30,0	0/0:20,0:19:57.18:0,57,1100	0/0:12,0:12:33.07:0,33,506	1/1:0,7:7:9.03:147,9,0	0/0:9,0:9:27.09:0,27,508	1/1:1,9:10:15.05:244,15,0	1/1:0,8:8:15.05:244,15,0	0/0:14,0:14:39.10:0,39,684	0/0:22,1:23:2.80:0,3,1056	0/0:17,0:17:48.10:0,48,918	0/0:8,0:8:21.07:0,21,407
chr10	5624401	.	GTGTATATA	G	42.69	PASS	AB=0.964;AC=9;AF=0.167;AN=54;BaseQRankSum=-1.453;DP=237;FS=1.240;HRun=0;HaplotypeScore=119.1244;InbreedingCoeff=0.0149;MQ=39.56;MQ0=4;MQRankSum=-0.828;QD=0.56;ReadPosRankSum=-2.918;VQSLOD=1.8982;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,16:19:2.19:87,2,0	0/1:5,0:5:13.64:14,0,39	0/0:7,0:2:2.28:0,2,9	0/0:18,0:4:3.47:0,3,26	0/0:2,0:3:2.97:0,3,47	0/0:10,0:12:14.86:0,15,145	0/0:2,0:3:3:0,3,26	0/0:28,0:27:72.93:0,73,787	0/0:2,0:2:3.01:0,3,41	0/0:4,0:4:7.07:0,7,133	0/0:3,0:3:5.02:0,5,28	0/1:5,0:5:0.01:0,0,0	0/0:3,0:4:0.46:0,0,1	0/1:4,0:6:0.04:0,0,1	0/1:7,0:7:11.85:12,0,203	0/0:7,0:7:11.94:0,12,297	0/1:13,0:13:9.82:10,0,395	0/1:5,0:5:10.87:11,0,32	0/1:16,0:15:21.35:21,0,771	0/0:8,0:8:6.45:0,6,186	0/0:2,0:2:3.01:0,3,50	0/0:7,0:7:15.04:0,15,342	0/0:5,0:6:2.98:0,3,51	./.	0/0:10,0:10:2.91:0,3,82	0/0:19,0:19:19.27:0,19,390	0/0:13,0:13:21.04:0,21,218	0/0:4,0:3:6.02:0,6,64
chr10	5624403	.	GTATA	G	2195.75	PASS	AB=0.783;AC=31;AF=0.620;AN=50;BaseQRankSum=-4.999;DP=242;FS=7.353;HRun=0;HaplotypeScore=104.8089;InbreedingCoeff=0.4328;MQ=39.58;MQ0=5;MQRankSum=-0.981;QD=14.35;ReadPosRankSum=-0.590;VQSLOD=2.3709;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:19:2.74:28,3,0	1/1:1,4:5:6.01:76,6,0	./.	0/0:21,0:6:3.46:0,3,24	0/1:2,1:3:0.04:0,0,0	1/1:5,7:12:6.02:102,6,0	1/1:2,1:3:2.90:51,3,0	1/1:11,17:27:51.05:690,51,0	0/0:2,0:2:0.89:0,1,2	1/1:4,0:4:6.01:58,6,0	./.	0/1:0,5:5:0:0,0,0	1/1:2,3:5:2.59:47,3,0	0/1:3,2:6:0.02:0,0,0	0/1:8,0:8:15.55:16,0,95	0/0:8,0:8:11.92:0,12,177	0/0:13,0:13:23.97:0,24,330	1/1:4,2:6:9.02:121,9,0	0/0:15,0:14:14.16:0,14,487	0/0:8,0:8:6.01:0,6,122	1/1:2,0:2:3:25,3,0	0/1:7,0:7:9.62:10,0,184	1/1:2,4:6:3:25,3,0	./.	0/0:10,0:10:2.94:0,3,52	1/1:2,14:17:42.13:686,42,0	1/1:2,10:13:17.92:307,18,0	1/1:1,3:3:6.02:102,6,0
chr10	5624418	.	T	TATAC	473.47	PASS	AB=1.000;AC=8;AF=0.143;AN=56;BaseQRankSum=0.364;DP=285;FS=0.000;HRun=0;HaplotypeScore=134.2387;InbreedingCoeff=0.1830;MQ=45.18;MQ0=5;MQRankSum=-0.561;QD=7.40;ReadPosRankSum=-1.083;VQSLOD=2.7235;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:2.43:0,2,38	0/0:5,0:5:3.01:0,3,33	0/0:15,0:7:2.98:0,3,21	0/0:18,0:6:7.90:0,8,71	0/0:6,0:6:5.62:0,6,48	0/0:13,0:13:14.87:0,15,112	0/0:7,0:7:17.70:0,18,150	0/0:19,0:19:36.54:0,37,388	0/1:6,0:6:0.03:0,0,0	0/0:3,0:3:3.01:0,3,32	0/0:5,0:5:11.91:0,12,92	0/0:6,0:6:2.56:0,3,22	0/0:6,0:6:5.84:0,6,52	0/0:7,0:7:2.61:0,3,24	0/0:10,0:10:4.93:0,5,21	0/1:11,0:11:8.30:8,0,19	1/1:7,6:14:18.96:462,19,0	0/0:6,0:6:11.58:0,12,93	0/1:18,0:17:76.91:106,0,77	0/1:12,0:12:3.04:3,0,4	1/1:3,0:3:0.47:1,0,0	0/0:9,0:9:4.69:0,5,20	0/0:7,0:7:2.73:0,3,25	0/0:6,0:6:2.99:0,3,24	0/0:13,0:13:2.39:0,2,9	0/0:17,0:17:45.11:0,45,491	0/0:15,0:15:26.92:0,27,271	0/0:5,0:5:9:0,9,90
chr10	5624435	.	TACACACACACACACAC	T	1458.37	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=3.490;DP=341;FS=1.766;HRun=0;HaplotypeScore=177.3120;InbreedingCoeff=0.8389;MQ=43.55;MQ0=14;MQRankSum=-3.834;QD=16.76;ReadPosRankSum=-2.808;VQSLOD=2.3398;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:25:20.90:0,21,548	0/0:3,0:6:12.04:0,12,678	0/0:22,0:7:15.05:0,15,525	0/0:29,0:7:6.02:0,6,211	0/0:4,0:6:7.43:0,7,361	0/0:8,0:17:24.07:0,24,1208	0/0:6,0:10:21.54:0,22,1085	0/0:20,0:19:27.09:0,27,1504	1/1:1,5:6:8.55:53,9,0	0/0:2,0:4:12.04:0,12,637	0/0:4,0:6:9.03:0,9,509	0/0:7,0:7:3:0,3,146	0/0:4,0:8:12.04:0,12,598	0/0:6,0:11:22.01:0,22,847	1/1:1,7:8:17.55:101,18,0	1/1:3,5:9:16.81:117,17,0	1/1:4,8:12:17.98:617,18,0	0/0:4,0:8:18.06:0,18,880	1/1:11,5:17:17.99:551,18,0	1/1:5,8:14:10.42:86,10,0	0/0:2,0:7:10.51:0,11,472	1/1:4,3:7:5.87:35,6,0	0/0:6,0:8:9.49:0,9,452	0/0:3,0:7:9.03:0,9,442	1/1:7,7:14:11.44:91,11,0	0/0:23,0:26:54.19:0,54,3378	0/0:11,0:14:27.56:0,28,1601	0/0:8,0:10:24.08:0,24,1502
chr10	5624503	.	TGAGAGAGAGAGA	T	2230.30	PASS	AB=1.000;AC=40;AF=0.741;AN=54;BaseQRankSum=0.280;DP=315;FS=1.220;HRun=0;HaplotypeScore=131.6356;InbreedingCoeff=0.5187;MQ=64.11;MQ0=7;MQRankSum=-0.923;QD=9.78;ReadPosRankSum=0.636;VQSLOD=2.6426;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:15:3.01:83,3,0	1/1:4,0:4:3.01:84,3,0	0/0:12,0:11:0:0,0,0	0/1:26,0:12:0:0,0,0	1/1:5,0:6:5.97:103,6,0	1/1:12,1:13:9.03:184,9,0	1/1:9,0:9:3:26,3,0	0/0:19,0:19:12.04:0,12,341	1/1:13,2:15:12.02:257,12,0	1/1:10,0:10:6.01:73,6,0	1/1:5,0:5:3.01:49,3,0	./.	1/1:10,2:12:6.02:205,6,0	1/1:7,1:8:5.97:122,6,0	1/1:12,2:14:9.03:276,9,0	1/1:10,1:11:6.49:155,6,0	0/0:19,0:19:27.09:0,27,417	1/1:10,1:11:8.99:185,9,0	1/1:10,1:11:9.02:215,9,0	1/1:10,0:10:5.92:39,6,0	0/1:9,0:9:0:0,0,0	1/1:11,1:12:5.96:122,6,0	1/1:7,0:7:3:27,3,0	1/1:8,0:8:3.48:50,3,0	1/1:9,1:9:6:127,6,0	0/0:18,0:18:24.08:0,24,1143	0/0:5,0:5:3.01:0,3,114	0/0:10,0:9:12.02:0,12,372
chr10	5624960	.	TACACACACACAC	T	2141.70	PASS	AB=0.952;AC=29;AF=0.604;AN=48;BaseQRankSum=2.165;DP=488;FS=5.187;HRun=0;HaplotypeScore=166.5969;InbreedingCoeff=0.0730;MQ=67.77;MQ0=26;MQRankSum=-1.094;QD=6.82;ReadPosRankSum=3.597;VQSLOD=2.3727;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:30:50.43:50,0,57	1/1:3,2:6:6.02:164,6,0	0/0:34,0:20:1.82:0,2,5	./.	0/0:8,1:15:0:0,0,0	./.	1/1:22,0:20:3:25,3,0	0/0:16,0:15:12.04:0,12,267	0/1:14,1:16:16.94:211,0,17	1/1:18,0:18:12.04:255,12,0	1/1:5,10:16:0.89:2,1,0	./.	1/1:14,5:20:6.02:141,6,0	./.	0/1:16,0:14:22.62:150,0,23	0/1:15,0:14:79.50:238,0,79	0/0:22,0:21:4.50:0,4,857	1/1:16,1:16:6.02:194,6,0	0/1:16,1:17:38.14:149,0,38	1/1:15,0:14:6.02:127,6,0	1/1:20,0:19:6.01:71,6,0	0/1:11,1:10:35.29:305,0,35	1/1:9,0:9:3:25,3,0	1/1:19,0:18:2.99:24,3,0	1/1:15,2:15:2.07:100,2,0	0/1:24,1:24:56.68:57,0,1318	0/0:16,0:14:30.09:0,30,1260	0/0:6,0:5:9.03:0,9,308
chr10	5625542	.	T	TTTTATGTATTTATTTA	8406.14	PASS	AB=0.920;AC=29;AF=0.518;AN=56;BaseQRankSum=3.927;DP=305;FS=3.392;HRun=0;HaplotypeScore=116.8809;InbreedingCoeff=-0.0119;MQ=66.83;MQ0=1;MQRankSum=-5.594;QD=31.84;ReadPosRankSum=-1.306;VQSLOD=3.3478;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:11,0:12:99:109,0,138	0/0:4,0:4:8.06:0,8,73	0/0:4,0:4:6.02:0,6,82	0/0:8,0:7:14.97:0,15,146	0/1:10,0:10:48.38:48,0,165	0/1:15,0:15:99:663,0,178	0/1:5,0:5:66.93:185,0,67	0/1:36,0:35:99:348,0,461	1/1:15,0:17:32.98:475,33,0	0/1:11,0:12:99:342,0,187	0/0:6,0:6:17.99:0,18,160	0/1:5,0:6:99:100,0,113	0/1:5,0:6:68.94:106,0,69	0/1:7,0:7:99:117,0,128	1/1:10,0:11:23.86:602,24,0	1/1:2,8:12:3.01:234,3,0	1/1:26,0:28:71.46:1108,71,0	0/1:17,0:21:80.85:1399,0,81	1/1:14,0:14:32.06:565,32,0	1/1:6,0:6:14.90:113,15,0	0/0:8,0:8:17.92:0,18,147	1/1:7,0:7:20.96:170,21,0	0/1:2,0:3:17.96:162,0,18	0/0:2,0:2:3:0,3,27	1/1:3,9:16:15.05:1142,15,0	0/1:11,0:12:99:190,0,245	0/1:7,0:7:97.82:228,0,98	0/0:9,0:9:20.06:0,20,147
chr10	5625754	.	GTCCATCCA	G	6547.01	PASS	AB=1.000;AC=41;AF=0.732;AN=56;BaseQRankSum=4.531;DP=533;FS=4.406;HRun=0;HaplotypeScore=193.0445;InbreedingCoeff=0.7023;MQ=55.07;MQ0=13;MQRankSum=-3.402;QD=17.37;ReadPosRankSum=2.663;VQSLOD=3.8700;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:33,0:33:20.78:160,21,0	1/1:6,0:6:3.01:56,3,0	0/0:36,0:17:3.48:0,3,85	0/0:31,0:19:9.03:0,9,210	1/1:13,0:13:11.30:103,11,0	1/1:19,0:19:21.01:277,21,0	1/1:25,0:25:14.99:199,15,0	0/0:36,0:36:33.11:0,33,575	1/1:8,23:31:54.19:1344,54,0	1/1:12,0:20:23.96:264,24,0	1/1:7,0:7:5.61:66,6,0	1/1:20,0:20:30.03:410,30,0	1/1:17,0:17:23.81:342,24,0	1/1:11,0:11:11.94:134,12,0	1/1:8,17:25:39.13:931,39,0	1/1:7,12:19:30.10:747,30,0	0/0:25,0:25:31.49:0,31,432	0/1:17,0:17:41.29:48,0,41	1/1:12,7:17:21.07:462,21,0	1/1:5,6:11:12.03:158,12,0	1/1:21,0:21:3.01:45,3,0	1/1:5,10:15:15.05:357,15,0	1/1:13,0:13:11.99:187,12,0	1/1:21,0:21:11.95:152,12,0	1/1:10,4:14:6.02:106,6,0	0/0:4,0:12:30.10:0,30,936	0/0:0,0:8:3.01:0,3,104	0/0:0,0:5:9.03:0,9,283
chr10	5625755	.	TCCATCCATCCA	T	2997.13	PASS	AB=0.823;AC=14;AF=0.250;AN=56;BaseQRankSum=13.632;DP=532;FS=23.524;HRun=0;HaplotypeScore=231.7702;InbreedingCoeff=-0.3544;MQ=54.77;MQ0=13;MQRankSum=-10.222;QD=12.18;ReadPosRankSum=6.239;VQSLOD=1.0347;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:29,4:33:99:158,0,325	0/1:4,2:6:60.73:63,0,61	0/0:37,0:16:22.68:0,23,568	0/0:30,0:18:47.09:0,47,782	0/1:10,4:14:83.45:149,0,83	0/1:12,7:19:99:384,0,117	0/1:19,6:25:99:246,0,235	0/0:35,0:35:99:0,105,2156	0/0:31,0:31:10.62:0,11,253	0/1:16,4:20:56.86:359,0,57	0/1:6,1:7:59.39:59,0,80	0/1:12,8:20:99:569,0,114	0/1:12,5:17:90.14:493,0,90	0/1:10,1:11:99:146,0,101	0/0:25,0:25:17.43:0,17,315	0/0:19,0:19:15.02:0,15,261	0/0:25,0:25:69.20:0,69,1614	0/1:15,2:17:56.39:56,0,268	0/0:18,0:16:29.39:0,29,474	0/0:11,0:11:32.30:0,32,371	0/1:21,1:22:75.57:76,0,177	0/0:15,0:15:11.05:0,11,166	0/1:8,5:13:91.68:232,0,92	0/1:19,3:22:99:162,0,142	0/0:14,0:14:32.32:0,32,410	0/0:13,0:12:36.12:0,36,1544	0/0:8,0:8:3.01:0,3,159	0/0:5,0:5:9.03:0,9,401
chr10	5632789	.	TGGCTCTTGAACCGACGTAATGAAG	T	38866.49	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=15.577;DP=539;FS=10.084;HRun=0;HaplotypeScore=362.1880;InbreedingCoeff=0.9551;MQ=83.37;MQ0=0;MQRankSum=-14.897;QD=97.90;ReadPosRankSum=9.335;VQSLOD=2.7508;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:16,22:38:38.28:2258,38,0	1/1:2,5:7:15.05:998,15,0	0/0:22,0:22:60.21:0,60,3823	0/0:24,0:24:69.23:0,69,4422	1/1:2,7:9:18.06:925,18,0	1/1:6,9:15:21.07:1397,21,0	1/1:8,6:14:12.04:798,12,0	0/0:24,0:24:69.24:0,69,5042	1/1:4,12:16:30.10:1996,30,0	1/1:10,7:17:21.07:1398,21,0	1/1:4,8:12:15.05:587,15,0	1/1:5,17:22:41.78:2794,42,0	1/1:7,19:26:51.18:3392,51,0	1/1:4,21:25:54.02:3593,54,0	1/1:5,26:31:60.21:3992,60,0	1/1:1,17:18:45.15:2994,45,0	1/1:13,17:30:38.28:2562,38,0	1/1:2,12:14:27.09:1558,27,0	1/1:6,8:14:24.08:1442,24,0	1/1:7,11:18:30.10:1996,30,0	1/1:12,9:21:7.12:596,7,0	1/1:2,5:7:15.05:998,15,0	1/1:5,6:11:14.74:731,15,0	1/1:11,8:19:16.88:861,17,0	1/1:7,6:13:15.05:998,15,0	0/0:29,0:29:87.30:0,87,8426	0/0:31,0:31:87.30:0,87,8564	0/0:12,0:12:36.12:0,36,3222
chr10	5634040	.	C	CTG	2289.84	PASS	AB=0.975;AC=27;AF=0.482;AN=56;BaseQRankSum=-2.580;DP=637;FS=21.762;HRun=0;HaplotypeScore=123.9775;InbreedingCoeff=-0.1311;MQ=62.65;MQ0=32;MQRankSum=0.930;QD=4.81;ReadPosRankSum=1.407;VQSLOD=1.6381;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:25.13:0,25,292	0/0:6,0:5:6.90:0,7,69	0/0:24,0:17:3.01:0,3,34	0/0:20,0:14:6.02:0,6,68	1/1:19,0:18:14.42:211,14,0	0/1:23,0:21:66.42:66,0,128	0/1:34,0:32:44.85:126,0,45	0/1:32,0:32:37.65:214,0,38	1/1:17,4:20:8.58:260,9,0	0/1:22,0:20:18.69:130,0,19	0/0:19,0:18:2.99:0,3,23	0/1:25,0:23:91.90:142,0,92	0/1:26,0:24:25.45:25,0,82	0/0:28,0:25:9.55:0,10,67	1/1:14,1:16:5.18:44,5,0	0/1:18,3:19:20.81:191,0,21	0/1:25,1:27:48.35:168,0,48	0/1:26,0:25:45.54:150,0,46	1/1:22,1:22:5.26:123,5,0	1/1:13,0:9:3.46:40,3,0	0/1:33,0:31:28.63:29,0,107	0/1:20,2:22:4.41:81,0,4	0/0:17,0:16:5.98:0,6,55	0/1:44,1:44:53.54:252,0,54	1/1:16,0:17:0.21:1,0,0	0/1:24,0:22:20.65:128,0,21	0/0:16,0:15:4.15:0,4,25	1/1:4,0:4:5.76:69,6,0
chr10	5634066	.	GTGTC	G	1747.06	PASS	AB=0.998;AC=34;AF=0.607;AN=56;BaseQRankSum=-6.473;DP=593;FS=7.860;HRun=0;HaplotypeScore=141.7237;InbreedingCoeff=0.0207;MQ=52.41;MQ0=38;MQRankSum=2.336;QD=3.42;ReadPosRankSum=-3.387;VQSLOD=0.4165;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:24:11.96:112,12,0	0/0:11,0:9:0.41:0,0,1	0/0:6,0:3:5.99:0,6,49	0/0:9,0:5:2.94:0,3,18	0/0:16,0:15:0.47:0,0,1	1/1:22,2:21:8.70:136,9,0	0/1:26,0:24:29.30:29,0,97	1/1:33,0:31:35.62:259,36,0	0/1:27,0:26:86.76:91,0,87	1/1:20,0:18:9.99:120,10,0	1/1:16,1:16:5.93:64,6,0	1/1:26,1:25:11.26:147,11,0	1/1:18,2:18:8.03:127,8,0	1/1:23,0:20:5.43:88,5,0	0/1:18,0:17:50.16:58,0,50	0/1:19,0:17:27.80:28,0,154	0/1:28,0:27:67.68:68,0,90	1/1:27,1:26:3.55:89,4,0	0/0:18,0:16:1.98:0,2,80	1/1:11,0:8:2.19:23,2,0	1/1:33,0:29:0.08:43,0,0	0/1:24,0:24:70.64:71,0,140	0/0:17,0:17:1.94:0,2,46	0/1:54,1:54:61.46:80,0,61	0/1:16,0:16:35.02:83,0,35	1/1:21,0:18:17.67:129,18,0	1/1:14,1:14:4.68:52,5,0	0/0:4,0:4:0.47:0,0,1
chr10	5634068	.	GTC	G	5070.71	PASS	AB=0.741;AC=39;AF=0.696;AN=56;BaseQRankSum=-4.068;DP=594;FS=23.243;HRun=0;HaplotypeScore=117.8192;InbreedingCoeff=-0.0803;MQ=52.31;MQ0=39;MQRankSum=1.832;QD=9.07;ReadPosRankSum=-0.865;VQSLOD=2.8933;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:25:31.05:31,0,190	0/1:3,8:9:36.62:37,0,58	0/0:7,0:3:9:0,9,83	0/0:10,0:5:11.33:0,11,95	1/1:3,13:15:18.06:258,18,0	0/1:8,15:20:39.18:229,0,39	0/1:7,21:26:97.31:175,0,97	1/1:12,22:32:0.93:460,1,0	1/1:25,1:25:3.21:154,3,0	1/1:6,14:18:7.71:359,8,0	1/1:3,14:16:5.56:30,6,0	1/1:7,19:25:8.35:328,8,0	0/1:5,15:18:7.61:246,0,8	1/1:3,20:20:17.38:204,17,0	0/1:17,1:17:15.13:79,0,15	0/1:16,3:17:44.64:90,0,45	0/1:25,2:26:54.73:210,0,55	1/1:5,22:25:23.62:330,24,0	1/1:18,1:17:5.62:114,6,0	1/1:8,3:8:8.38:86,8,0	0/1:13,20:29:63.44:169,0,63	0/1:22,2:24:17.34:118,0,17	0/0:4,14:17:5.31:0,5,55	0/1:7,49:55:8.45:537,0,8	1/1:14,2:16:0.36:106,0,0	1/1:4,16:16:10.62:392,11,0	1/1:1,12:12:15.31:195,15,0	1/1:0,4:4:9.03:134,9,0
chr10	5634129	.	TAAAGCACCAGCA	T	1449.22	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.245;DP=698;FS=6.381;HRun=0;HaplotypeScore=237.9525;InbreedingCoeff=0.9702;MQ=84.46;MQ0=2;MQRankSum=-4.994;QD=40.26;ReadPosRankSum=-1.680;VQSLOD=2.5240;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:13,23:36:44.67:1544,45,0	0/0:20,0:20:50.96:0,51,2710	0/0:30,0:30:44.82:0,45,4057	0/0:28,0:25:48.01:0,48,3020	0/0:15,0:15:45.15:0,45,2757	0/0:24,0:23:54.19:0,54,3381	0/0:21,0:21:48.16:0,48,3003	0/0:32,0:32:96.33:0,96,5243	0/0:31,0:31:90.30:0,90,5308	0/0:28,0:28:81.28:0,81,4882	0/0:17,0:17:47.55:0,48,2560	0/0:30,0:30:60.16:0,60,3329	0/0:25,0:24:50.68:0,51,3187	0/0:27,0:27:60.20:0,60,3456	0/0:22,0:22:66.19:0,66,3743	0/0:20,0:20:60.21:0,60,3367	0/0:16,0:16:45.14:0,45,2790	0/0:23,0:23:48.16:0,48,2937	0/0:21,0:21:63.22:0,63,3756	0/0:20,0:20:56.93:0,57,3358	0/0:33,0:33:75.26:0,75,4689	0/0:21,0:21:63.22:0,63,3802	0/0:23,0:23:47.86:0,48,3005	0/0:58,0:58:99:0,111,6642	0/0:22,0:22:66.23:0,66,4073	0/0:25,0:25:75.26:0,75,4395	0/0:25,0:25:57.20:0,57,3431	0/0:5,0:5:12.04:0,12,752
chr10	5635329	.	GATGAGCCTGCTTT	G	1667.49	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.495;DP=694;FS=3.599;HRun=0;HaplotypeScore=240.6090;InbreedingCoeff=0.9998;MQ=73.55;MQ0=1;MQRankSum=-6.588;QD=64.13;ReadPosRankSum=1.314;VQSLOD=3.4743;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,17:26:45.12:1762,45,0	0/0:14,0:14:42.14:0,42,2656	0/0:20,0:20:51.17:0,51,2696	0/0:14,0:14:39.13:0,39,1983	0/0:26,0:26:78.27:0,78,5005	0/0:26,0:26:78.27:0,78,4707	0/0:25,0:25:75.26:0,75,4575	0/0:34,0:34:99:0,99,5427	0/0:19,0:19:57.20:0,57,3363	0/0:37,0:37:99:0,108,6629	0/0:31,0:31:90.31:0,90,5772	0/0:35,0:35:96.33:0,96,5778	0/0:28,0:28:84.29:0,84,5318	0/0:34,0:34:99:0,99,6081	0/0:32,0:31:90.30:0,90,5542	0/0:32,0:32:93.32:0,93,5683	0/0:20,0:20:60.21:0,60,3819	0/0:21,0:21:54.19:0,54,3327	0/0:17,0:17:51.16:0,51,2696	0/0:32,0:32:90.31:0,90,5675	0/0:26,0:26:78.27:0,78,4662	0/0:31,0:31:84.29:0,84,5384	0/0:24,0:24:72.25:0,72,4450	0/0:16,0:16:48.16:0,48,3013	0/0:15,0:15:45.15:0,45,2775	0/0:25,0:25:75.25:0,75,4622	0/0:21,0:21:63.20:0,63,3789	0/0:13,0:13:39.13:0,39,2167
chr10	5636039	.	CTGTGTGTGTG	C	1613.73	PASS	AB=0.858;AC=24;AF=0.462;AN=52;BaseQRankSum=4.035;DP=631;FS=31.122;HRun=0;HaplotypeScore=192.8193;InbreedingCoeff=0.3324;MQ=65.97;MQ0=10;MQRankSum=-4.719;QD=5.00;ReadPosRankSum=1.453;VQSLOD=1.0652;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:31:8.84:0,9,71	1/1:6,3:11:11.77:245,12,0	./.	./.	0/0:15,0:20:8.23:0,8,69	1/1:13,13:25:3.01:83,3,0	1/1:18,0:18:2.32:8,2,0	0/0:27,0:27:23.84:0,24,286	0/0:14,0:21:13.89:0,14,129	0/1:22,1:24:27.67:148,0,28	1/1:6,5:11:6.48:65,6,0	1/1:16,7:23:12.04:328,12,0	1/1:9,7:17:15.05:368,15,0	1/1:13,7:20:3.01:89,3,0	0/0:15,0:24:1.13:0,1,157	0/1:16,0:24:3.39:3,0,204	0/0:28,0:41:28.43:0,28,1031	0/1:26,1:31:99:199,0,167	0/1:21,0:22:20.66:21,0,130	0/0:10,0:9:5.99:0,6,50	1/1:26,0:25:2.99:25,3,0	0/0:21,0:21:9.01:0,9,178	0/1:22,9:31:16.06:97,0,16	1/1:21,1:22:5.99:93,6,0	0/0:21,0:21:24.04:0,24,302	0/0:22,0:22:24:0,24,297	0/0:23,0:25:27.09:0,27,543	0/1:13,0:14:14.37:14,0,125
chr10	5636917	.	CACAT	C	1580.59	PASS	AB=1.000;AC=18;AF=0.321;AN=56;BaseQRankSum=16.069;DP=1004;FS=17.069;HRun=0;HaplotypeScore=264.9972;InbreedingCoeff=-0.1727;MQ=55.92;MQ0=19;MQRankSum=-15.323;QD=2.94;ReadPosRankSum=5.190;VQSLOD=0.9663;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:10,45:54:32.97:720,33,0	0/1:7,0:7:13.53:14,0,30	0/0:53,0:26:68.66:0,69,873	0/0:50,0:26:53.73:0,54,628	0/1:37,0:37:81.23:81,0,97	0/1:41,0:41:67.96:68,0,134	0/1:38,0:38:96.38:112,0,96	0/0:48,0:48:20.57:0,21,576	0/0:36,0:35:51.52:0,52,643	0/1:34,0:33:94.28:94,0,167	0/1:18,0:18:37.45:37,0,52	0/1:39,0:39:72.67:116,0,73	0/1:40,0:39:97.82:100,0,98	0/1:37,0:37:64.67:175,0,65	0/0:46,0:45:95.70:0,96,791	0/0:38,1:39:12.05:0,12,602	0/0:40,0:40:99:0,107,1975	0/1:34,0:34:24.54:25,0,177	0/0:14,0:13:18.49:0,18,361	0/0:30,0:29:45.96:0,46,598	0/0:48,0:48:2.92:0,3,147	0/0:42,0:42:19.14:0,19,687	0/1:30,0:29:12.66:13,0,139	0/1:56,0:56:13.45:13,0,214	0/0:21,0:21:46.85:0,47,459	0/1:29,0:29:56.50:57,0,240	0/1:26,0:25:59.96:67,0,60	1/1:16,0:16:9.12:57,9,0
chr10	5636919	.	CAT	C	1224.28	PASS	AB=0.988;AC=11;AF=0.196;AN=56;BaseQRankSum=4.340;DP=994;FS=19.629;HRun=0;HaplotypeScore=244.1452;InbreedingCoeff=-0.0343;MQ=53.33;MQ0=19;MQRankSum=1.261;QD=3.63;ReadPosRankSum=7.134;VQSLOD=0.9892;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:53,1:54:37.04:302,37,0	0/0:7,0:7:6.21:0,6,46	0/0:50,0:24:48.47:0,48,748	0/0:45,0:22:34.07:0,34,502	0/0:38,0:38:19.73:0,20,154	0/0:39,0:39:28.98:0,29,203	0/1:37,0:37:9.61:10,0,132	0/0:49,0:49:50.34:0,50,590	0/1:34,2:35:99:191,0,179	0/0:32,0:31:17.08:0,17,208	0/1:18,0:18:6.58:7,0,64	0/0:39,0:39:6.07:0,6,117	0/0:40,0:39:28.33:0,28,172	0/0:38,0:38:15.83:0,16,144	0/1:44,0:43:99:154,0,182	0/1:35,2:37:99:239,0,161	0/0:42,0:42:78.43:0,78,1412	0/0:32,0:32:19.26:0,19,238	0/1:16,0:15:30.85:31,0,111	0/1:31,0:30:85.98:86,0,260	0/0:48,0:48:23.09:0,23,176	0/1:42,0:42:99:215,0,184	0/0:30,0:29:23.84:0,24,175	0/0:55,0:56:8.50:0,9,223	0/1:21,0:21:55.07:141,0,55	0/0:30,0:30:56.90:0,57,365	0/0:25,0:24:21.24:0,21,118	0/0:16,0:16:12.39:0,12,36
chr10	5636921	.	TACACACAC	T	12778.02	PASS	AB=0.610;AC=32;AF=0.571;AN=56;BaseQRankSum=-2.247;DP=1004;FS=7.372;HRun=0;HaplotypeScore=284.8926;InbreedingCoeff=0.8309;MQ=53.25;MQ0=20;MQRankSum=-10.011;QD=22.22;ReadPosRankSum=-0.193;VQSLOD=3.1223;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:57:27.29:0,27,541	1/1:3,5:8:4.41:153,4,0	0/0:49,0:24:24.07:0,24,548	0/0:45,0:22:36.08:0,36,636	1/1:6,32:39:38.96:891,39,0	1/1:10,27:38:26.52:861,27,0	1/1:7,28:36:47.14:1006,47,0	0/1:23,27:50:6.81:977,0,7	0/0:11,0:34:72.18:0,72,1394	1/1:8,24:31:38.89:1568,39,0	0/1:4,12:16:0.91:440,0,1	1/1:6,33:41:36.16:892,36,0	1/1:7,35:41:13.54:982,14,0	1/1:6,32:38:60.02:1554,60,0	0/0:14,0:44:78.21:0,78,1487	0/0:13,0:36:75.16:0,75,1443	0/0:44,0:46:99:0,105,2946	1/1:11,17:28:18.24:292,18,0	0/0:9,0:18:46.60:0,47,593	0/0:14,0:30:49.89:0,50,999	1/1:18,30:48:9.45:187,9,0	0/0:10,0:41:91.46:0,91,1696	1/1:9,19:28:11.31:246,11,0	1/1:21,36:57:13.88:385,14,0	0/0:6,0:21:51.64:0,52,1131	1/1:10,19:30:59.27:1100,59,0	1/1:6,20:26:29.93:707,30,0	1/1:1,14:15:1.70:538,2,0
chr10	5637769	.	CTCGA	C	505.33	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.639;DP=345;FS=6.721;HRun=0;HaplotypeScore=58.9467;InbreedingCoeff=0.8315;MQ=89.98;MQ0=0;MQRankSum=-2.492;QD=33.69;ReadPosRankSum=1.183;VQSLOD=2.9536;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,13:15:33.11:600,33,0	0/0:3,0:3:6.02:0,6,157	0/0:20,0:19:49.52:0,50,969	0/0:19,0:19:29.62:0,30,939	0/0:9,0:9:27.09:0,27,703	0/0:10,0:10:27.09:0,27,658	0/0:20,0:20:57.20:0,57,1459	0/0:10,0:10:24.04:0,24,564	0/0:14,0:14:42.14:0,42,1068	0/0:12,0:12:33.05:0,33,802	0/0:5,0:5:15.05:0,15,393	0/0:13,0:13:36.12:0,36,905	0/0:11,0:11:30.10:0,30,779	0/0:16,0:16:45.12:0,45,1111	0/0:12,0:12:36.12:0,36,909	0/0:10,0:10:24.08:0,24,629	0/0:17,0:17:51.18:0,51,1279	0/0:9,0:9:27.09:0,27,707	0/0:6,0:6:15.05:0,15,377	0/0:8,0:8:18.06:0,18,470	0/0:18,0:18:54.19:0,54,1382	0/0:21,0:21:57.20:0,57,1469	0/0:6,0:6:15.05:0,15,393	0/0:16,0:16:48.16:0,48,1221	0/0:9,0:9:27.09:0,27,694	0/0:14,0:14:39.13:0,39,1008	0/0:14,0:13:42.11:0,42,985	0/0:7,0:7:12.04:0,12,314
chr10	5638349	.	TA	T	7652.88	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=15.281;DP=607;FS=7.752;HRun=6;HaplotypeScore=61.2600;InbreedingCoeff=0.9977;MQ=76.99;MQ0=0;MQRankSum=-1.376;QD=28.34;ReadPosRankSum=2.468;VQSLOD=5.5023;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,26:28:69.17:741,69,0	1/1:1,13:14:39.10:419,39,0	0/0:17,0:17:41.15:0,41,525	0/0:13,0:14:18.79:0,19,290	1/1:2,34:36:96.24:1032,96,0	1/1:3,23:26:69.17:741,69,0	1/1:2,14:16:36.09:387,36,0	0/0:31,0:31:84.27:0,84,1105	0/0:15,0:15:45.15:0,45,592	1/1:2,22:24:66.16:703,66,0	1/1:1,28:29:81.16:858,81,0	1/1:1,12:13:30.08:322,30,0	1/1:0,19:19:51.13:548,51,0	1/1:1,10:11:30.07:322,30,0	0/0:16,0:16:45.13:0,45,578	0/0:15,0:15:42.14:0,42,553	0/0:43,0:43:99:0,117,1506	1/1:0,19:19:57.14:612,57,0	0/0:26,0:26:72.19:0,72,905	0/0:32,0:32:93.28:0,93,1192	1/1:0,6:6:18.05:193,18,0	0/0:20,0:20:54.18:0,54,710	1/1:2,14:16:38.89:418,39,0	1/1:1,12:13:33.08:355,33,0	0/0:21,0:21:60.20:0,60,790	0/0:37,0:37:99:0,105,1381	0/0:29,0:29:81.24:0,81,1031	0/0:21,0:21:60.18:0,60,770
chr10	5638836	.	ATGTGTGTGTG	A	7435.95	PASS	AB=0.692;AC=30;AF=0.556;AN=54;BaseQRankSum=-0.696;DP=655;FS=0.000;HRun=0;HaplotypeScore=221.5190;InbreedingCoeff=0.3945;MQ=50.67;MQ0=12;MQRankSum=-4.482;QD=19.57;ReadPosRankSum=1.484;VQSLOD=3.9532;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:27:18.17:0,18,73	1/1:1,3:4:9.03:238,9,0	./.	0/0:46,0:16:6.02:0,6,91	1/1:8,7:15:5.99:181,6,0	1/1:6,8:15:18.06:521,18,0	1/1:15,14:30:6.60:588,7,0	0/0:23,0:25:31.30:0,31,523	0/0:8,0:30:3.13:0,3,168	1/1:14,15:30:42:953,42,0	1/1:3,7:10:2.74:90,3,0	1/1:11,10:24:36.12:1013,36,0	1/1:4,10:17:33.11:924,33,0	1/1:6,19:26:45.02:1327,45,0	0/1:10,0:17:4.56:5,0,198	0/0:7,0:18:24.90:0,25,215	1/1:16,0:28:0.07:244,0,0	0/1:9,16:25:45.39:604,0,45	0/1:17,0:20:33.09:33,0,143	0/1:10,1:23:93.53:94,0,122	0/0:33,10:42:2.46:0,2,14	0/1:10,0:22:10.33:10,0,104	1/1:6,11:19:8.62:270,9,0	1/1:19,7:28:11.38:296,11,0	0/0:5,0:18:16.38:0,16,115	0/1:14,0:26:45.29:45,0,658	0/0:9,0:20:34.96:0,35,484	0/0:7,0:8:21.04:0,21,355
chr10	5641358	.	TTGTGTGTGTG	T	3587.55	PASS	AB=0.882;AC=24;AF=0.429;AN=56;BaseQRankSum=-0.432;DP=644;FS=4.617;HRun=0;HaplotypeScore=166.8760;InbreedingCoeff=0.7367;MQ=54.73;MQ0=33;MQRankSum=-2.286;QD=12.29;ReadPosRankSum=1.181;VQSLOD=2.6840;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:27:36.95:0,37,323	1/1:10,2:9:21.02:440,21,0	0/1:32,0:7:1.14:1,0,50	0/0:30,0:8:6.02:0,6,115	1/1:9,3:12:5.98:110,6,0	1/1:11,5:15:18.02:460,18,0	1/1:14,13:26:6.49:171,6,0	0/0:36,0:33:30.41:0,30,439	0/0:16,0:17:17.78:0,18,385	1/1:11,10:21:26.98:374,27,0	1/1:8,0:9:9.02:135,9,0	1/1:18,10:28:11.87:361,12,0	1/1:17,0:17:7.31:305,7,0	1/1:22,6:25:38.86:671,39,0	0/0:23,0:23:21.07:0,21,462	0/0:17,0:18:15.05:0,15,376	0/0:22,0:24:45.13:0,45,1285	0/1:9,4:13:26.18:207,0,26	0/0:22,0:20:27.40:0,27,492	0/0:24,0:24:24.05:0,24,487	1/1:32,31:60:2.97:20,3,0	0/0:15,0:20:3.67:0,4,107	1/1:9,2:11:15.01:332,15,0	0/0:29,0:30:0:0,0,0	0/0:19,0:19:14.97:0,15,270	0/0:20,0:20:31.65:0,32,503	0/0:16,0:19:23.95:0,24,735	0/0:6,0:9:27.09:0,27,728
chr10	5641418	.	GGTGT	G	1485.69	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-0.239;DP=661;FS=7.875;HRun=0;HaplotypeScore=164.5950;InbreedingCoeff=0.9472;MQ=55.73;MQ0=38;MQRankSum=-4.028;QD=25.62;ReadPosRankSum=-1.804;VQSLOD=2.7481;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:33:44.02:0,44,729	0/0:7,0:7:15.05:0,15,336	0/0:77,0:9:14.97:0,15,220	0/0:93,0:18:11.43:0,11,132	0/0:8,0:8:11.56:0,12,263	0/0:16,0:15:30.08:0,30,612	0/0:23,0:23:44.94:0,45,992	1/1:6,19:23:11.10:492,11,0	0/0:12,0:11:24.08:0,24,600	0/0:21,0:20:54.14:0,54,1273	0/0:12,0:12:33.11:0,33,802	0/0:17,0:18:35.82:0,36,601	0/0:20,0:20:33.11:0,33,812	0/0:21,0:21:42.12:0,42,911	0/0:14,0:14:39.13:0,39,958	0/0:19,0:19:39.13:0,39,957	0/0:22,0:21:50.91:0,51,1115	0/0:13,0:13:27.82:0,28,525	0/0:19,0:13:17.98:0,18,396	0/0:9,0:9:24.08:0,24,605	0/0:66,0:59:93.32:0,93,1990	0/0:18,0:19:36:0,36,827	0/0:9,0:10:20.98:0,21,428	0/0:31,0:30:41.18:0,41,985	0/0:14,0:14:24.08:0,24,603	1/1:1,11:12:32.98:532,33,0	1/1:3,10:13:29.99:408,30,0	1/1:4,4:8:12.04:207,12,0
chr10	5641452	.	TGAATG	T	715.15	PASS	AB=0.877;AC=9;AF=0.161;AN=56;BaseQRankSum=3.439;DP=661;FS=10.848;HRun=0;HaplotypeScore=186.2023;InbreedingCoeff=-0.2093;MQ=47.22;MQ0=43;MQRankSum=-6.029;QD=4.41;ReadPosRankSum=-4.423;VQSLOD=0.5248;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:21:91.25:91,0,335	0/1:5,7:12:99:129,0,118	0/0:67,0:7:20.93:0,21,333	0/0:76,0:18:34.49:0,34,721	0/0:9,1:10:8.68:0,9,126	0/1:16,1:14:76.80:77,0,142	0/0:29,0:29:56.78:0,57,745	0/0:23,0:20:37.64:0,38,508	0/0:13,0:13:33.11:0,33,636	0/1:19,1:18:27.57:28,0,580	0/0:12,5:16:8.10:0,8,441	0/1:18,3:19:97.91:98,0,233	0/1:14,2:15:99:100,0,421	0/1:19,7:23:99:143,0,455	0/0:27,0:27:64.86:0,65,1203	0/0:23,0:23:61.04:0,61,1047	0/0:25,0:24:54.65:0,55,1088	0/1:13,1:13:99:172,0,166	0/0:15,0:12:31.79:0,32,379	0/0:15,0:15:44.92:0,45,794	0/0:46,4:39:47.79:0,48,694	0/0:20,0:20:47.92:0,48,880	0/1:12,2:14:17.18:17,0,142	0/0:32,0:27:34.37:0,34,527	0/0:18,0:18:9.47:0,9,708	0/0:17,0:16:44.59:0,45,750	0/0:13,0:13:3.03:0,3,431	0/0:9,0:9:17.90:0,18,351
chr10	5641457	.	G	GGTGTGT	2475.91	PASS	AB=0.974;AC=27;AF=0.519;AN=52;BaseQRankSum=-2.125;DP=678;FS=19.227;HRun=0;HaplotypeScore=200.4565;InbreedingCoeff=0.6064;MQ=46.72;MQ0=38;MQRankSum=-5.607;QD=7.79;ReadPosRankSum=-2.187;VQSLOD=1.2486;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:23:12.04:170,12,0	0/1:11,0:12:12.16:187,0,12	./.	./.	1/1:8,1:10:3.01:39,3,0	1/1:13,3:18:8.98:289,9,0	0/0:23,0:30:15.55:0,16,144	0/0:23,0:20:4.98:0,5,58	0/0:15,0:16:12.01:0,12,287	1/1:19,2:21:27.36:496,27,0	1/1:17,1:17:6.01:121,6,0	1/1:12,3:17:18.06:391,18,0	1/1:18,0:17:18.02:240,18,0	1/1:23,0:24:20.03:378,20,0	0/0:27,0:30:37.26:0,37,681	0/0:21,0:23:35.61:0,36,655	0/0:26,0:26:30.08:0,30,568	1/1:10,0:11:6.02:126,6,0	0/0:14,0:14:8.98:0,9,111	0/0:15,0:15:26.88:0,27,457	1/1:53,0:44:14.78:149,15,0	0/0:19,0:19:18.06:0,18,364	1/1:10,0:12:1.03:7,1,0	1/1:33,0:29:3.01:42,3,0	0/1:17,0:18:17.89:18,0,346	0/0:20,0:19:15.04:0,15,269	0/1:13,0:13:15.32:15,0,169	0/0:10,0:10:16.58:0,17,204
chr10	5642808	.	A	AGTGTGTGTGT	16014.63	PASS	AB=1.000;AC=46;AF=0.821;AN=56;BaseQRankSum=-3.732;DP=817;FS=7.354;HRun=0;HaplotypeScore=211.5177;InbreedingCoeff=0.5906;MQ=61.65;MQ0=33;MQRankSum=-6.965;QD=24.15;ReadPosRankSum=-2.041;VQSLOD=2.9174;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,1:46:18:463,18,0	1/1:2,6:10:6.02:300,6,0	0/0:45,0:25:19.33:0,19,355	0/0:41,0:20:17.53:0,18,344	1/1:22,4:25:13.68:452,14,0	1/1:8,12:28:21.04:795,21,0	1/1:9,13:33:6.02:196,6,0	1/1:38,0:36:41.89:599,42,0	1/1:35,0:38:20.37:667,20,0	1/1:31,2:33:68.58:2162,69,0	1/1:4,12:22:9.03:260,9,0	1/1:8,15:32:26.42:1221,26,0	1/1:4,10:17:21.07:883,21,0	1/1:7,20:36:24.08:819,24,0	1/1:25,0:25:15.05:524,15,0	1/1:28,0:28:27.56:1004,28,0	0/0:29,0:29:42.55:0,43,877	1/1:7,9:23:27.01:848,27,0	0/1:17,0:17:24.81:318,0,25	0/1:22,0:22:14.39:103,0,14	1/1:23,0:18:14.92:328,15,0	1/1:20,0:21:5.74:329,6,0	0/0:12,16:36:0.63:0,1,2	1/1:9,14:28:11.87:466,12,0	1/1:20,0:19:9.03:334,9,0	1/1:8,0:36:70.07:1759,70,0	1/1:10,0:28:27.09:814,27,0	1/1:7,0:8:17.98:371,18,0
chr10	5642825	.	G	GTGTGTGTCTGTC	12217.23	PASS	AB=1.000;AC=32;AF=0.571;AN=56;BaseQRankSum=2.927;DP=819;FS=15.351;HRun=0;HaplotypeScore=232.2804;InbreedingCoeff=-0.2146;MQ=55.02;MQ0=36;MQRankSum=-8.578;QD=18.18;ReadPosRankSum=7.350;VQSLOD=1.8818;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:50,0:48:99:228,0,265	1/1:7,0:7:6.02:180,6,0	0/0:39,0:21:28.74:0,29,313	0/0:47,0:22:33.60:0,34,372	0/1:30,0:26:99:251,0,117	0/1:25,0:24:46.54:424,0,47	0/1:31,0:28:63.33:63,0,110	0/1:32,0:28:99:276,0,201	1/1:6,28:44:23.82:1079,24,0	0/1:35,0:31:99:715,0,125	0/1:24,0:23:99:128,0,194	0/1:31,0:30:51.05:717,0,51	0/1:21,0:20:99:482,0,205	0/1:33,0:32:43.77:489,0,44	1/1:2,21:29:15.05:817,15,0	1/1:1,31:35:12.04:1633,12,0	0/0:9,0:31:42.46:0,42,837	0/1:22,0:21:99:474,0,132	1/1:13,0:28:65.56:1408,66,0	1/1:1,17:24:8.29:210,8,0	0/1:26,0:20:67:67,0,104	1/1:3,27:31:11.97:568,12,0	0/0:27,0:26:6.36:0,6,97	0/1:28,0:27:77.25:279,0,77	1/1:5,12:19:10.59:571,11,0	0/1:33,0:32:67.71:511,0,68	0/1:24,0:24:14:482,0,14	0/1:7,0:7:32.93:162,0,33
chr10	5645505	.	G	GCA	2180.21	PASS	AB=0.865;AC=16;AF=0.333;AN=48;BaseQRankSum=-2.370;DP=749;FS=0.000;HRun=0;HaplotypeScore=115.7789;InbreedingCoeff=-0.2981;MQ=31.19;MQ0=264;MQRankSum=0.088;QD=4.70;ReadPosRankSum=1.358;VQSLOD=2.7640;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	1/1:2,3:3:9.03:147,9,0	./.	./.	0/1:6,1:6:29:42,0,29	0/1:29,2:24:57.11:57,0,318	0/1:29,7:19:99:161,0,119	0/1:22,0:6:0:0,0,0	0/0:33,0:19:39.12:0,39,461	0/1:35,6:33:99:116,0,386	0/1:9,1:7:20.60:21,0,127	0/1:16,6:15:97.86:126,0,98	0/1:36,3:33:35.25:35,0,520	0/1:28,12:31:99:244,0,311	0/0:28,0:18:36.08:0,36,414	0/0:32,0:20:45.12:0,45,518	0/0:24,0:11:18.06:0,18,223	0/1:16,12:21:99:484,0,198	./.	0/0:19,0:11:27.08:0,27,333	0/1:71,11:56:99:392,0,564	0/0:15,0:10:6.01:0,6,70	0/1:16,3:11:23.66:123,0,24	0/1:52,15:48:99:346,0,402	0/0:6,0:2:6.02:0,6,70	0/0:35,0:22:29.98:0,30,340	0/1:14,1:10:30.63:31,0,166	0/0:10,0:3:6.02:0,6,73
chr10	5645573	.	GCA	G	32.43	PASS	AB=1.000;AC=7;AF=0.438;AN=16;BaseQRankSum=2.567;DP=279;FS=0.000;HRun=0;HaplotypeScore=26.7739;MQ=13.24;MQ0=204;MQRankSum=-0.300;QD=0.88;ReadPosRankSum=-2.567;VQSLOD=0.3900;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	0/1:1,0:1:0:0,0,0	./.	0/0:5,0:1:2.96:0,3,19	0/0:33,1:18:10.27:0,10,656	./.	0/0:6,0:5:2.89:0,3,21	./.	0/0:3,0:2:2.94:0,3,18	./.	./.	./.	1/1:6,14:7:2.93:32,3,0	./.	./.	1/1:3,2:2:6.02:71,6,0	./.	1/1:9,0:3:2.74:12,3,0	./.	./.	./.	./.	./.	./.	./.
chr10	5645837	.	G	GCA	94.70	PASS	AB=0.810;AC=10;AF=0.294;AN=34;BaseQRankSum=2.195;DP=360;FS=0.000;HRun=0;HaplotypeScore=51.4350;InbreedingCoeff=0.2492;MQ=25.61;MQ0=195;MQRankSum=-1.962;QD=2.49;ReadPosRankSum=-2.428;VQSLOD=1.1218;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	1/1:2,0:2:3:25,3,0	./.	./.	0/1:3,1:3:31.17:43,0,31	./.	0/0:8,0:4:2.92:0,3,17	0/0:61,0:8:3:0,3,37	1/1:3,0:2:5.80:41,6,0	0/1:8,2:5:40.21:40,0,60	0/0:3,7:3:2.84:0,3,14	0/0:5,0:1:2.98:0,3,22	0/0:4,0:3:6.01:0,6,65	./.	1/1:8,2:4:3.90:51,4,0	0/1:5,1:3:0:0,0,0	./.	./.	./.	0/0:5,0:3:3.01:0,3,37	0/0:8,0:2:3.01:0,3,37	0/1:2,1:1:0:0,0,0	./.	./.	./.	0/0:55,1:37:41:0,41,989	0/0:34,0:24:42.09:0,42,499	0/0:14,0:12:30.08:0,30,358
chr10	5645885	.	G	GCACA	313.23	PASS	AB=0.685;AC=7;AF=0.175;AN=40;BaseQRankSum=2.356;DP=441;FS=3.981;HRun=0;HaplotypeScore=60.5807;InbreedingCoeff=0.1211;MQ=31.68;MQ0=122;MQRankSum=-4.806;QD=4.61;ReadPosRankSum=0.250;VQSLOD=1.4596;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:4:3.01:0,3,52	0/0:3,13:12:3.01:0,3,52	0/0:39,0:7:15.02:0,15,206	0/0:37,0:7:1.63:0,2,97	0/1:10,13:14:14.44:14,0,42	0/0:1,2:1:3.01:0,3,52	0/0:7,0:4:3.01:0,3,52	0/0:59,0:32:93.32:0,93,1603	0/0:4,0:3:3.01:0,3,52	0/1:7,18:15:30.84:376,0,31	0/1:8,2:4:0:0,0,0	1/1:6,0:2:2.22:7,2,0	1/1:4,0:3:2.51:8,3,0	./.	0/0:10,1:3:3:0,3,36	./.	./.	./.	0/0:5,0:1:3.01:0,3,52	0/0:5,7:8:3.01:0,3,52	0/0:11,0:4:9.03:0,9,155	./.	./.	./.	./.	0/0:45,0:34:15.34:0,15,1256	0/0:32,0:25:34.58:0,35,876	0/0:16,0:16:27.57:0,28,588
chr10	5645979	.	G	GCA	5051.65	PASS	AB=0.813;AC=42;AF=0.808;AN=52;BaseQRankSum=2.114;DP=395;FS=11.396;HRun=0;HaplotypeScore=64.8061;InbreedingCoeff=0.4319;MQ=27.20;MQ0=106;MQRankSum=0.705;QD=16.09;ReadPosRankSum=0.862;VQSLOD=3.5443;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:2:3.27:0,3,13	1/1:6,2:5:12.04:139,12,0	0/0:32,0:8:21.04:0,21,247	0/0:28,0:3:9.03:0,9,109	1/1:11,5:10:21.07:285,21,0	1/1:4,9:9:12.04:184,12,0	1/1:8,1:4:6.02:85,6,0	1/1:18,0:7:3.01:49,3,0	1/1:2,2:3:6.02:99,6,0	0/1:10,2:10:10.80:274,0,11	1/1:9,2:9:24.07:301,24,0	1/1:12,4:14:36.03:458,36,0	1/1:12,6:10:27.08:358,27,0	1/1:17,3:14:0.85:401,1,0	0/0:7,3:3:3.01:0,3,38	1/1:7,0:4:3.01:50,3,0	./.	1/1:7,1:5:15.04:184,15,0	1/1:7,1:4:2.98:21,3,0	1/1:6,7:9:18.06:298,18,0	0/1:7,2:4:25.29:75,0,25	1/1:5,14:13:12.04:197,12,0	1/1:7,3:8:8.94:90,9,0	1/1:4,2:5:5.93:53,6,0	./.	1/1:21,15:22:39.13:640,39,0	1/1:11,14:20:29.96:492,30,0	1/1:12,12:16:22.75:318,23,0
chr10	5645982	.	C	CAT	4710.39	PASS	AB=0.863;AC=36;AF=0.692;AN=52;BaseQRankSum=5.377;DP=398;FS=20.686;HRun=0;HaplotypeScore=66.3263;InbreedingCoeff=0.2604;MQ=28.10;MQ0=104;MQRankSum=-1.206;QD=15.39;ReadPosRankSum=4.274;VQSLOD=2.9986;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:2:3.48:0,3,30	1/1:4,5:5:12.04:212,12,0	0/0:32,0:8:24.01:0,24,337	0/0:26,0:3:9.03:0,9,137	1/1:12,4:10:21.03:298,21,0	1/1:12,2:10:12.03:151,12,0	1/1:8,1:4:6.02:85,6,0	0/1:13,0:3:18.94:25,0,19	1/1:5,0:4:6.02:66,6,0	0/1:6,7:10:42.75:352,0,43	1/1:3,7:9:24.08:403,24,0	1/1:5,11:14:36.11:531,36,0	1/1:14,8:14:27.09:406,27,0	0/1:9,13:16:9.03:486,0,9	0/0:11,0:4:3.01:0,3,45	1/1:9,0:6:3.01:33,3,0	./.	1/1:3,5:5:15.05:244,15,0	0/0:11,0:4:5.92:0,6,39	1/1:12,0:9:18.05:198,18,0	0/1:8,1:4:35.69:74,0,36	1/1:17,0:13:12.03:130,12,0	1/1:5,5:8:9.03:136,9,0	1/1:2,3:5:4.26:58,4,0	./.	0/1:35,0:21:57.82:356,0,58	1/1:26,0:21:9.11:286,9,0	0/1:24,0:16:99:182,0,107
chr10	5645991	.	AGAAAGG	A	60.45	PASS	AB=0.895;AC=3;AF=0.058;AN=52;BaseQRankSum=1.077;DP=349;FS=1.833;HRun=0;HaplotypeScore=87.5032;InbreedingCoeff=0.2737;MQ=29.22;MQ0=72;MQRankSum=-0.663;QD=2.88;ReadPosRankSum=-1.406;VQSLOD=1.7258;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,2:2:6.02:106,6,0	0/0:9,0:5:12.04:0,12,300	0/0:26,0:8:24.08:0,24,729	0/0:26,0:3:9.03:0,9,179	0/0:13,0:10:9.64:0,10,414	0/0:13,0:10:15.05:0,15,395	0/0:7,0:5:12.04:0,12,283	0/0:12,0:5:12.04:0,12,394	0/0:4,0:4:9.03:0,9,213	0/0:13,0:11:33.11:0,33,852	0/0:10,0:9:24.08:0,24,639	0/0:16,0:14:11.15:0,11,639	0/0:22,0:14:38.49:0,38,929	0/0:18,0:15:40.96:0,41,852	0/0:10,0:5:6.02:0,6,170	0/0:5,0:4:6.02:0,6,114	./.	0/0:8,0:5:15.05:0,15,416	0/0:9,0:6:12.04:0,12,394	0/0:13,0:10:24.08:0,24,576	0/0:7,0:5:12.04:0,12,263	0/0:15,0:11:0.44:0,0,238	0/0:11,0:9:17.99:0,18,358	0/0:7,0:6:5.97:0,6,82	./.	0/0:29,0:19:31.14:0,31,1299	0/0:20,0:16:11.84:0,12,715	0/1:15,2:10:47.09:47,0,336
chr10	5646045	.	GCA	G	1784.62	PASS	AB=0.889;AC=23;AF=0.548;AN=42;BaseQRankSum=2.014;DP=361;FS=17.311;HRun=0;HaplotypeScore=83.7316;InbreedingCoeff=0.7016;MQ=31.78;MQ0=90;MQRankSum=0.835;QD=13.73;ReadPosRankSum=-1.211;VQSLOD=1.7390;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:27.56:0,28,449	./.	0/0:43,0:3:6.02:0,6,94	0/0:26,0:5:12:0,12,161	./.	./.	./.	0/0:43,1:18:42.14:0,42,659	1/1:2,11:13:20.86:253,21,0	1/1:5,0:5:2.89:16,3,0	1/1:7,0:8:1.25:3,1,0	./.	0/1:7,0:8:7.97:8,0,17	./.	1/1:1,25:20:39.12:492,39,0	1/1:2,15:14:33.11:416,33,0	1/1:0,4:4:6.02:76,6,0	0/0:4,0:4:2.97:0,3,20	1/1:2,10:7:15.03:175,15,0	1/1:2,9:11:18.06:227,18,0	0/0:9,0:9:3.01:0,3,43	1/1:3,6:7:12.04:151,12,0	1/1:5,0:7:2.49:5,2,0	./.	1/1:1,7:8:11.77:126,12,0	0/0:27,1:25:22.33:0,22,883	0/0:14,0:12:27.09:0,27,437	0/0:13,0:13:21.07:0,21,316
chr10	5646097	.	GCACA	G	657.80	PASS	AB=0.964;AC=24;AF=0.522;AN=46;BaseQRankSum=-0.204;DP=438;FS=8.722;HRun=0;HaplotypeScore=143.6690;InbreedingCoeff=0.3290;MQ=40.22;MQ0=23;MQRankSum=-1.999;QD=3.61;ReadPosRankSum=-0.370;VQSLOD=1.8910;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:24:4.58:30,5,0	./.	./.	./.	1/1:6,3:7:8.84:134,9,0	0/0:8,0:6:14.79:0,15,289	0/0:16,0:19:14.79:0,15,284	0/0:15,0:12:1.82:0,2,5	0/0:17,0:17:11.88:0,12,67	1/1:8,2:10:3:46,3,0	./.	1/1:0,6:6:15.05:232,15,0	0/1:8,1:10:23.89:24,0,59	./.	0/1:26,0:23:30.81:31,0,32	0/0:24,0:21:19.65:0,20,115	1/1:5,0:5:3.01:35,3,0	1/1:1,3:3:2.55:45,3,0	0/1:13,0:7:17.48:30,0,17	0/1:8,0:7:9.07:9,0,12	1/1:16,0:16:0.30:1,0,0	0/1:13,0:12:2.44:2,0,19	1/1:6,3:10:3.23:48,3,0	1/1:4,7:10:9.91:141,10,0	0/1:14,0:13:1.14:1,0,28	0/0:18,1:23:33.10:0,33,553	0/0:13,0:13:20.81:0,21,377	0/0:17,0:17:24.08:0,24,503
chr10	5646129	.	A	ATAT	1322.95	PASS	AB=0.900;AC=13;AF=0.232;AN=56;BaseQRankSum=9.094;DP=520;FS=60.236;HRun=0;HaplotypeScore=154.6664;InbreedingCoeff=0.5792;MQ=46.62;MQ0=22;MQRankSum=-6.951;QD=13.64;ReadPosRankSum=3.493;VQSLOD=1.0845;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:31:53.76:0,54,859	0/0:7,0:6:9.03:0,9,140	0/0:33,0:19:54.17:0,54,959	0/0:29,0:16:17.33:0,17,724	0/0:14,0:11:9.49:0,9,96	0/0:15,0:12:24.07:0,24,388	0/0:27,0:26:48.16:0,48,843	0/0:26,0:21:59.67:0,60,996	1/1:8,7:14:2.68:338,3,0	0/0:37,0:26:69.20:0,69,1153	0/0:17,0:15:12.04:0,12,220	0/0:15,0:14:30.08:0,30,426	0/0:16,0:15:24.08:0,24,404	0/0:15,0:13:8.66:0,9,164	1/1:14,4:14:3.44:193,3,0	1/1:14,1:14:26.79:294,27,0	1/1:5,0:4:6.02:80,6,0	0/0:9,0:8:18.94:0,19,306	0/1:10,1:10:99:155,0,177	0/1:10,1:8:2.95:90,0,3	0/0:32,0:29:27.56:0,28,494	1/1:4,5:7:11.78:181,12,0	0/0:16,0:14:6.49:0,6,87	0/0:19,0:18:30.54:0,31,444	0/1:11,2:11:51.46:155,0,51	0/0:26,0:23:66.13:0,66,1007	0/0:17,0:17:51.10:0,51,845	0/0:21,0:21:55.97:0,56,928
chr10	5646131	.	A	ATAT	1050.48	PASS	AB=0.751;AC=11;AF=0.196;AN=56;BaseQRankSum=8.204;DP=515;FS=64.683;HRun=0;HaplotypeScore=150.3249;InbreedingCoeff=0.3268;MQ=47.46;MQ0=21;MQRankSum=-5.745;QD=12.51;ReadPosRankSum=2.805;VQSLOD=0.8010;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:23.19:0,23,556	0/0:7,0:6:9.03:0,9,140	0/0:33,0:20:57.20:0,57,1024	0/0:29,0:18:30.95:0,31,768	0/0:15,0:12:9.49:0,9,96	0/0:15,0:12:24.08:0,24,420	0/0:27,0:26:48.16:0,48,857	0/0:27,0:22:62.94:0,63,1074	0/1:10,0:13:15.57:86,0,16	0/0:38,0:27:72.07:0,72,1176	0/0:17,0:15:12.04:0,12,220	0/0:15,0:14:33.05:0,33,445	0/0:18,0:17:30.04:0,30,452	0/0:16,0:14:8.66:0,9,164	0/1:7,7:12:29.22:332,0,29	1/1:4,5:9:19.97:301,20,0	1/1:4,1:4:6.01:97,6,0	0/0:9,0:8:18.94:0,19,306	0/1:8,1:9:99:147,0,161	0/1:7,1:7:9.70:75,0,10	0/0:32,0:29:30.57:0,31,539	1/1:5,0:7:2.75:67,3,0	0/0:16,0:14:6.49:0,6,87	0/0:19,0:18:30.56:0,31,476	0/1:7,4:9:20.30:98,0,20	0/0:27,0:24:66.13:0,66,997	0/0:18,0:18:54.17:0,54,932	0/0:21,0:21:55.71:0,56,929
chr10	5646132	.	C	CAT	429.64	PASS	AB=0.940;AC=14;AF=0.250;AN=56;BaseQRankSum=8.463;DP=516;FS=36.759;HRun=0;HaplotypeScore=145.1604;InbreedingCoeff=0.4910;MQ=47.96;MQ0=21;MQRankSum=-4.396;QD=3.94;ReadPosRankSum=4.075;VQSLOD=1.5489;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:31:29.17:0,29,257	0/0:7,0:6:8.89:0,9,60	0/0:33,0:20:53.99:0,54,503	0/0:28,0:18:49.70:0,50,470	0/0:15,0:12:8.11:0,8,67	0/0:15,0:12:23.92:0,24,264	0/0:27,0:26:47.63:0,48,438	0/0:28,0:23:64.98:0,65,526	1/1:15,0:14:10.24:108,10,0	0/0:38,0:27:67.57:0,68,543	0/0:17,0:15:11.97:0,12,96	0/0:16,0:15:32.73:0,33,239	0/0:18,0:17:32.68:0,33,256	0/0:17,0:15:8.93:0,9,66	0/1:11,5:12:25.80:82,0,26	1/1:4,5:9:18.21:141,18,0	1/1:5,0:4:3:25,3,0	0/0:9,0:8:18.76:0,19,133	0/1:9,0:8:39.49:60,0,39	1/1:9,1:7:5.88:43,6,0	0/0:33,0:30:33.28:0,33,247	0/1:9,0:7:5.65:19,0,6	0/0:16,0:14:5.94:0,6,44	0/0:19,0:18:30.35:0,30,231	1/1:6,3:7:4.37:56,4,0	0/1:27,0:24:61.38:61,0,290	0/0:18,0:18:53.75:0,54,471	0/0:21,0:21:33.93:0,34,388
chr10	5646134	.	C	CAAGCA	3793.25	PASS	AB=0.875;AC=13;AF=0.232;AN=56;BaseQRankSum=9.500;DP=538;FS=66.000;HRun=0;HaplotypeScore=164.5893;InbreedingCoeff=0.7180;MQ=50.08;MQ0=20;MQRankSum=-9.810;QD=37.19;ReadPosRankSum=-3.964;VQSLOD=0.9361;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:27:39.79:0,40,642	0/0:7,0:6:9.03:0,9,175	0/0:34,0:22:60.21:0,60,1275	0/0:26,0:18:53.77:0,54,1002	0/0:15,0:12:11.33:0,11,180	0/0:16,0:13:27.08:0,27,535	0/0:28,0:27:51.16:0,51,984	0/0:29,0:24:69.19:0,69,1388	1/1:13,6:18:45.11:966,45,0	0/0:37,0:26:69.21:0,69,1390	0/0:17,0:15:12.04:0,12,265	0/0:17,0:16:36.11:0,36,624	0/0:18,0:17:33.09:0,33,602	0/0:17,0:15:7.18:0,7,170	1/1:11,9:17:20.49:658,20,0	1/1:2,5:9:21.69:505,22,0	0/1:8,0:7:4.01:293,0,4	0/0:9,0:8:18.06:0,18,373	0/1:14,0:14:99:548,0,175	1/1:9,1:7:18.06:349,18,0	0/0:33,0:30:37.48:0,37,722	0/1:6,3:9:0.57:141,0,1	0/0:17,0:14:3.84:0,4,106	0/0:19,0:18:29.28:0,29,591	1/1:6,4:8:15.52:332,16,0	0/0:27,0:24:65.02:0,65,1124	0/0:18,0:18:54.19:0,54,1121	0/0:23,0:23:55.73:0,56,1060
chr10	5646135	.	A	AT	291.73	PASS	AB=0.946;AC=9;AF=0.161;AN=56;BaseQRankSum=8.975;DP=545;FS=36.563;HRun=0;HaplotypeScore=149.1061;InbreedingCoeff=0.1738;MQ=52.43;MQ0=20;MQRankSum=-5.967;QD=2.65;ReadPosRankSum=-0.011;VQSLOD=1.6398;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:22,5:26:99:163,0,293	0/0:9,0:8:8.94:0,9,100	0/0:34,0:22:63.21:0,63,865	0/0:28,0:20:53.43:0,53,680	0/0:15,0:12:11.83:0,12,96	0/0:16,0:13:27.04:0,27,351	0/0:29,0:28:51.11:0,51,673	0/0:29,0:24:72.22:0,72,974	0/1:18,0:18:27.71:32,0,28	0/0:37,0:26:69.14:0,69,899	0/0:17,0:15:12.04:0,12,166	0/0:17,0:16:38.66:0,39,391	0/0:18,0:17:33.03:0,33,405	0/0:17,0:15:8.28:0,8,123	0/1:21,0:18:45.66:46,0,61	1/1:9,0:9:6.33:27,6,0	0/1:9,0:8:21.50:56,0,22	0/0:9,0:8:17.97:0,18,223	0/1:14,0:14:88.65:89,0,113	0/0:9,0:7:1.39:0,1,9	0/0:32,0:29:39.13:0,39,533	0/0:12,0:10:3.60:0,4,43	0/0:18,0:15:5.72:0,6,58	0/0:20,0:19:30.31:0,30,340	1/1:9,0:8:3.94:15,4,0	0/0:27,0:24:66.17:0,66,817	0/0:19,0:19:54.13:0,54,725	0/0:22,0:22:60.15:0,60,763
chr10	5646136	.	C	CAAGCA	2066.79	PASS	AB=0.931;AC=11;AF=0.196;AN=56;BaseQRankSum=10.683;DP=551;FS=64.807;HRun=0;HaplotypeScore=173.1822;InbreedingCoeff=0.4881;MQ=53.60;MQ0=20;MQRankSum=-9.449;QD=18.79;ReadPosRankSum=-3.058;VQSLOD=0.8496;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:26:41.25:0,41,707	0/0:9,0:8:12.01:0,12,197	0/0:33,0:22:66.22:0,66,1374	0/0:28,0:21:51.07:0,51,1020	0/0:17,0:14:11.78:0,12,199	0/0:16,0:13:27.09:0,27,558	0/0:30,0:29:48.13:0,48,890	0/0:29,0:24:72.25:0,72,1481	0/1:18,0:18:2:443,0,2	0/0:37,0:26:69.23:0,69,1347	0/0:16,0:14:12.04:0,12,265	0/0:18,0:17:39.13:0,39,695	0/0:17,0:16:30.10:0,30,604	0/0:17,0:15:7.15:0,7,169	0/1:19,2:18:3.34:368,0,3	1/1:9,0:9:21.58:363,22,0	0/1:9,1:9:21.45:194,0,21	0/0:10,0:9:18.06:0,18,372	0/1:13,1:14:99:389,0,154	1/1:11,0:9:17.58:183,18,0	0/0:32,0:29:40.38:0,40,777	0/1:13,0:11:74.49:74,0,80	0/0:17,0:14:6.64:0,7,131	0/0:20,0:19:32.26:0,32,599	1/1:10,0:9:15:216,15,0	0/0:27,0:24:64.43:0,64,1088	0/0:19,0:19:54.18:0,54,1097	0/0:22,0:22:60.19:0,60,1138
chr10	5646514	.	C	CTCTG	6319.08	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-11.880;DP=962;FS=6.148;HRun=0;HaplotypeScore=144.3051;InbreedingCoeff=0.9383;MQ=64.15;MQ0=38;MQRankSum=1.569;QD=28.85;ReadPosRankSum=2.600;VQSLOD=4.4994;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:43:51.91:0,52,474	0/0:13,0:13:30.10:0,30,491	0/0:92,0:31:0.71:0,1,166	0/0:145,0:40:15.03:0,15,276	0/0:23,0:23:42.11:0,42,600	0/0:20,0:19:33.10:0,33,519	0/0:35,0:35:69.20:0,69,1067	0/0:30,0:29:54.13:0,54,728	1/1:6,27:34:51.18:1257,51,0	0/0:33,0:33:75.25:0,75,1219	0/0:13,0:13:27.09:0,27,443	0/0:33,0:33:66.20:0,66,1042	0/0:29,0:29:63.18:0,63,978	0/0:33,0:33:84.24:0,84,1307	1/1:5,34:41:59.94:1479,60,0	1/1:4,13:17:27.09:666,27,0	1/1:8,17:25:28.82:737,29,0	0/0:12,0:12:27.09:0,27,419	1/1:13,13:24:45.06:775,45,0	1/1:4,12:16:6.02:148,6,0	0/0:50,0:50:99:0,105,1659	1/1:7,23:31:23.97:592,24,0	0/0:11,0:11:21.06:0,21,319	0/0:38,0:38:69.31:0,69,1346	1/1:5,20:27:27.09:666,27,0	0/0:28,0:28:78.22:0,78,1177	0/0:37,0:37:96.31:0,96,1564	0/0:20,0:19:51.11:0,51,754
chr10	5647135	.	AG	A	556.68	PASS	AB=0.920;AC=12;AF=0.214;AN=56;BaseQRankSum=0.874;DP=349;FS=2.781;HRun=10;HaplotypeScore=127.6361;InbreedingCoeff=0.2368;MQ=54.94;MQ0=0;MQRankSum=-3.747;QD=4.68;ReadPosRankSum=1.359;VQSLOD=1.3636;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:26.52:0,27,227	0/0:2,0:5:5.06:0,5,22	0/0:6,0:6:8.82:0,9,67	0/0:4,0:4:5.94:0,6,42	0/0:5,0:10:5.68:0,6,29	0/0:7,0:7:2.97:0,3,20	0/1:20,0:22:2.31:2,0,76	1/1:3,4:7:8.94:78,9,0	0/0:18,0:18:18.93:0,19,201	0/0:5,0:7:3.73:0,4,16	0/1:6,0:6:4.39:4,0,24	0/0:19,0:19:1.85:0,2,39	0/1:12,0:12:0.84:1,0,35	0/0:13,0:13:5.40:0,5,14	0/1:19,1:19:2.25:2,0,181	0/0:19,0:20:25.41:0,25,224	0/0:18,0:18:42.11:0,42,464	0/0:9,0:13:7.18:0,7,40	0/0:7,0:7:15.02:0,15,154	0/0:12,0:12:5.97:0,6,65	0/0:10,0:16:5.67:0,6,29	0/0:18,0:18:20.70:0,21,201	0/0:6,0:6:2.22:0,2,7	0/0:9,0:9:2.80:0,3,9	0/1:13,1:14:8.04:8,0,148	1/1:7,17:24:50.93:435,51,0	0/1:5,7:12:15.15:111,0,15	1/1:0,2:2:5.99:51,6,0
chr10	5647792	.	G	GATAA	2543.58	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-4.779;DP=707;FS=2.151;HRun=0;HaplotypeScore=118.0579;InbreedingCoeff=0.9949;MQ=89.83;MQ0=0;MQRankSum=-4.312;QD=65.22;ReadPosRankSum=-0.198;VQSLOD=5.7619;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,38:39:99:2638,102,0	0/0:9,0:9:21.07:0,21,407	0/0:33,0:33:90.27:0,90,1583	0/0:32,0:32:70.47:0,70,1532	0/0:16,0:16:45.12:0,45,829	0/0:23,0:23:69.24:0,69,1322	0/0:17,0:17:48.11:0,48,861	0/0:27,0:27:78.18:0,78,1348	0/0:33,0:33:81.26:0,81,1512	0/0:24,0:24:72.24:0,72,1351	0/0:23,0:23:69.24:0,69,1315	0/0:27,0:27:78.23:0,78,1413	0/0:26,0:26:72.25:0,72,1395	0/0:22,0:22:63.16:0,63,1107	0/0:28,0:28:78.21:0,78,1408	0/0:27,0:27:81.28:0,81,1555	0/0:15,0:15:42.14:0,42,794	0/0:24,0:24:72.25:0,72,1371	0/0:22,0:22:63.16:0,63,1080	0/0:23,0:23:69.20:0,69,1204	0/0:33,0:33:90.30:0,90,1702	0/0:21,0:21:57.18:0,57,1050	0/0:10,0:10:27.09:0,27,523	0/0:48,0:48:99:0,120,2255	0/0:23,0:23:69.21:0,69,1260	0/0:35,0:34:99:0,105,1933	0/0:26,0:25:75.26:0,75,1437	0/0:21,0:21:63.10:0,63,928
chr10	5647872	.	TGCTC	T	533.41	PASS	AB=0.940;AC=10;AF=0.179;AN=56;BaseQRankSum=4.161;DP=626;FS=30.743;HRun=0;HaplotypeScore=149.6018;InbreedingCoeff=-0.2123;MQ=50.95;MQ0=9;MQRankSum=-4.382;QD=2.63;ReadPosRankSum=-2.488;VQSLOD=0.5450;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:27,1:28:13.90:14,0,740	0/0:11,0:11:14.54:0,15,255	0/0:35,0:18:45.15:0,45,1143	0/0:31,0:17:46.46:0,46,878	0/1:22,1:23:69.81:70,0,567	0/0:20,1:20:26.99:0,27,520	0/0:22,9:31:47.90:0,48,1161	0/1:28,4:31:99:151,0,1534	0/0:24,0:24:29.46:0,29,888	0/1:14,8:21:99:321,0,763	0/1:10,1:11:29.75:30,0,279	0/0:21,0:21:36.57:0,37,673	0/1:14,0:14:12.15:12,0,366	0/0:25,1:26:23.81:0,24,489	0/0:22,0:21:27.01:0,27,492	0/0:21,0:21:39.03:0,39,736	0/0:18,0:18:30.03:0,30,629	0/1:15,1:16:16.91:17,0,467	0/0:20,0:20:8.50:0,8,1037	0/0:17,0:17:33.04:0,33,652	0/0:32,0:32:26.92:0,27,560	0/0:20,0:20:29.75:0,30,543	0/0:19,0:19:17.69:0,18,342	0/0:40,0:39:11.55:0,12,217	0/0:14,0:14:15.04:0,15,301	0/1:28,0:28:2.55:3,0,1397	0/1:23,0:22:31.64:32,0,418	0/1:6,0:6:24.85:25,0,155
chr10	5647876	.	C	CGTGTGTGTGTGTGT	5770.68	PASS	AB=0.750;AC=46;AF=0.821;AN=56;BaseQRankSum=-3.068;DP=691;FS=1.356;HRun=0;HaplotypeScore=223.5967;InbreedingCoeff=0.2611;MQ=49.05;MQ0=11;MQRankSum=0.118;QD=9.85;ReadPosRankSum=0.765;VQSLOD=3.9236;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:26:11.79:12,0,30	1/1:3,12:16:3.01:201,3,0	0/0:35,0:17:2.99:0,3,27	0/0:33,0:15:2.92:0,3,17	1/1:21,0:21:12.35:175,12,0	1/1:22,0:21:10.12:190,10,0	1/1:32,0:32:9.45:74,9,0	1/1:33,0:32:53.87:764,54,0	1/1:11,0:30:9.89:116,10,0	1/1:22,0:21:48.05:882,48,0	1/1:11,0:11:2.56:68,3,0	1/1:7,0:21:8.95:136,9,0	1/1:4,0:17:8.88:253,9,0	0/1:19,0:27:2.86:20,0,3	1/1:9,0:25:11.86:231,12,0	1/1:7,0:26:12.02:211,12,0	0/1:8,0:19:8.88:120,0,9	1/1:8,0:19:6.97:373,7,0	1/1:16,0:22:22.58:390,23,0	1/1:8,0:24:5.80:91,6,0	0/0:19,16:37:2.43:0,2,19	1/1:6,0:25:4.95:123,5,0	0/1:7,0:22:0:0,0,1	1/1:24,0:46:4.30:204,4,0	1/1:2,0:14:2.69:62,3,0	1/1:9,0:30:50.52:807,51,0	1/1:5,0:24:11.63:183,12,0	1/1:1,0:6:6:85,6,0
chr10	5647899	.	GTGTGTGTA	G	426.31	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=0.508;DP=683;FS=1.047;HRun=0;HaplotypeScore=183.1046;InbreedingCoeff=0.5389;MQ=50.20;MQ0=11;MQRankSum=0.244;QD=8.88;ReadPosRankSum=-1.492;VQSLOD=2.1780;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:26,7:33:36.49:519,36,0	0/0:14,0:14:3.01:0,3,109	0/0:36,0:22:46.34:0,46,635	0/0:32,0:12:33.05:0,33,356	0/0:20,0:20:24.34:0,24,344	0/0:20,0:19:14.48:0,14,246	0/0:29,0:29:17.98:0,18,283	0/0:31,0:30:84.06:0,84,1340	0/0:25,0:25:30.50:0,31,457	0/0:23,0:22:65.69:0,66,1337	0/0:10,0:10:11.98:0,12,148	0/0:19,0:19:24.51:0,25,450	0/0:19,0:19:26.36:0,26,502	0/0:27,0:27:23.01:0,23,299	0/0:30,0:29:36.33:0,36,625	0/0:26,0:26:38.91:0,39,658	0/0:19,0:19:20.92:0,21,449	0/1:15,0:15:7.10:7,0,122	0/0:20,0:16:34.24:0,34,699	0/0:23,0:23:34.78:0,35,422	0/0:30,0:30:17.37:0,17,179	0/0:29,0:29:31.49:0,31,335	0/0:23,0:23:14.90:0,15,133	0/0:50,0:48:20.68:0,21,374	0/0:17,0:17:15.01:0,15,202	0/0:33,0:32:81.08:0,81,1685	0/0:24,0:24:18.03:0,18,370	0/0:6,0:6:9:0,9,160
chr10	5648465	.	AT	A	11807.20	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=15.222;DP=689;FS=3.199;HRun=1;HaplotypeScore=70.6694;InbreedingCoeff=0.9994;MQ=87.81;MQ0=0;MQRankSum=-2.329;QD=38.84;ReadPosRankSum=4.577;VQSLOD=5.5037;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,111,1744	1/1:0,7:7:21.07:294,21,0	0/0:30,0:30:90.23:0,90,1255	0/0:24,0:23:44.23:0,44,824	1/1:0,24:24:66.22:923,66,0	1/1:0,21:21:63.17:859,63,0	1/1:0,23:23:63.21:881,63,0	0/0:33,0:33:96.29:0,96,1452	0/0:28,0:28:81.26:0,81,1271	1/1:0,24:24:72.24:1006,72,0	1/1:0,23:23:57.19:797,57,0	1/1:0,18:18:54.18:755,54,0	1/1:0,26:26:69.23:965,69,0	1/1:0,21:21:60.20:839,60,0	0/0:21,0:21:63.20:0,63,984	0/0:27,0:27:81.28:0,81,1290	0/0:32,0:31:93.32:0,93,1472	1/1:0,28:28:81.27:1133,81,0	0/0:19,0:19:54.17:0,54,839	0/0:22,0:22:66.23:0,66,1055	1/1:0,33:33:93.31:1301,93,0	0/0:17,0:17:51.14:0,51,765	1/1:0,21:21:54.18:755,54,0	1/1:0,35:35:93.31:1301,93,0	0/0:21,0:21:63.21:0,63,1003	0/0:38,2:40:55.50:0,55,1734	0/0:21,0:21:60.18:0,60,904	0/0:13,0:13:39.13:0,39,623
chr10	5648850	.	ACC	A	942.58	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=-8.462;DP=711;FS=1.681;HRun=9;HaplotypeScore=136.3874;InbreedingCoeff=0.2045;MQ=63.07;MQ0=1;MQRankSum=2.496;QD=6.12;ReadPosRankSum=-2.475;VQSLOD=-0.1276;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,36:39:75.22:872,75,0	0/1:10,0:9:19.13:19,0,137	0/0:27,0:21:40.92:0,41,511	0/0:26,0:23:33.54:0,34,551	0/0:25,0:25:32.40:0,32,457	0/1:19,0:19:1.46:1,0,273	0/0:23,0:23:65.42:0,65,576	0/1:40,0:40:99:148,0,501	0/0:38,0:38:87.12:0,87,1263	0/0:34,0:34:35.42:0,35,533	0/0:18,0:18:23.02:0,23,372	0/0:37,0:37:29.63:0,30,744	0/1:22,0:22:15.83:16,0,362	0/0:24,0:24:32.83:0,33,436	0/0:30,0:32:77.48:0,77,1017	0/0:17,0:17:36.03:0,36,505	0/0:32,0:33:86.69:0,87,1297	0/0:17,0:17:44.95:0,45,385	0/0:6,0:7:17.54:0,18,219	0/0:15,0:15:21.01:0,21,288	0/0:37,0:37:77.21:0,77,785	0/0:19,0:19:38.98:0,39,527	0/1:24,0:24:15.80:16,0,373	0/0:46,0:46:24.96:0,25,795	0/0:17,0:17:33.99:0,34,521	0/0:35,0:35:89.70:0,90,733	0/0:17,0:17:27.34:0,27,410	0/0:11,0:11:8.60:0,9,206
chr10	5649012	.	T	TCACA	7076.88	PASS	AB=0.640;AC=15;AF=0.268;AN=56;BaseQRankSum=6.110;DP=954;FS=30.110;HRun=0;HaplotypeScore=292.3075;InbreedingCoeff=0.8961;MQ=62.11;MQ0=24;MQRankSum=-9.925;QD=37.05;ReadPosRankSum=-4.405;VQSLOD=3.3656;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:44:87.16:0,87,1463	0/0:5,0:5:2.16:0,2,46	0/0:108,0:48:56.88:0,57,975	0/0:111,0:52:94.77:0,95,1374	0/0:13,0:13:24.08:0,24,369	0/0:19,0:19:33.06:0,33,479	0/0:38,0:38:54.01:0,54,836	0/0:20,0:19:35.16:0,35,585	1/1:14,25:39:60.85:1846,61,0	0/0:28,0:28:61.83:0,62,1004	0/0:18,0:18:18.05:0,18,264	0/0:50,0:50:84.15:0,84,1369	0/0:36,0:36:62.93:0,63,926	0/0:33,0:33:66.22:0,66,1033	1/1:11,20:31:60.21:1483,60,0	1/1:12,13:25:54.15:1226,54,0	1/1:11,0:26:42.37:212,42,0	0/0:19,0:19:27.08:0,27,396	1/1:10,6:16:30.09:651,30,0	0/1:7,9:16:2.22:611,0,2	0/0:80,0:80:87.54:0,88,1377	1/1:6,10:18:23.81:522,24,0	0/0:27,0:27:54.14:0,54,812	0/0:54,0:54:69.11:0,69,1105	1/1:8,11:19:13.89:526,14,0	0/0:28,0:28:66.23:0,66,1118	0/0:25,0:26:60.20:0,60,991	0/0:4,0:4:9.03:0,9,153
chr10	5649031	.	T	TTCAC	26752.72	PASS	AB=0.876;AC=46;AF=0.821;AN=56;BaseQRankSum=1.343;DP=970;FS=8.243;HRun=0;HaplotypeScore=227.5780;InbreedingCoeff=0.5866;MQ=55.33;MQ0=31;MQRankSum=-4.757;QD=29.50;ReadPosRankSum=3.334;VQSLOD=3.3274;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:37,0:55:86.54:933,87,0	1/1:0,4:4:11.48:186,11,0	0/1:113,0:33:3.68:4,0,527	0/1:95,0:43:17.73:18,0,512	1/1:4,11:18:26.95:489,27,0	1/1:0,18:21:39.07:971,39,0	1/1:7,31:39:63.53:1919,64,0	0/0:34,0:35:55.75:0,56,1644	1/1:19,2:40:79.82:1298,80,0	1/1:1,22:27:72.15:1628,72,0	0/1:2,10:15:12.59:655,0,13	1/1:0,40:46:99:2848,102,0	1/1:0,28:34:68.20:1624,68,0	1/1:0,32:35:81.26:2229,81,0	1/1:17,1:28:59.23:965,59,0	1/1:10,0:21:50.98:780,51,0	1/1:14,0:23:46:700,46,0	1/1:2,16:22:36.08:842,36,0	1/1:11,0:13:35.34:445,35,0	1/1:9,0:19:32.47:381,32,0	1/1:2,75:93:99:2994,115,0	1/1:7,1:14:33.08:497,33,0	1/1:1,24:28:54.13:1450,54,0	1/1:5,44:52:85.20:2284,85,0	1/1:8,2:18:32.95:608,33,0	0/1:27,1:29:5.19:5,0,1189	0/0:21,0:22:66.08:0,66,1129	0/0:5,0:5:12.02:0,12,207
chr10	5649141	.	GCA	G	8540.74	PASS	AB=0.943;AC=27;AF=0.482;AN=56;BaseQRankSum=9.867;DP=890;FS=1.191;HRun=0;HaplotypeScore=239.7363;InbreedingCoeff=0.8726;MQ=54.58;MQ0=13;MQRankSum=3.379;QD=17.79;ReadPosRankSum=5.537;VQSLOD=4.7453;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:77,5:82:99:195,0,700	1/1:9,2:11:27.06:307,27,0	0/0:50,0:19:7.79:0,8,217	0/0:56,0:16:11.52:0,12,110	1/1:27,7:34:69.19:831,69,0	1/1:10,5:15:26.81:285,27,0	1/1:27,11:38:41.91:495,42,0	0/0:31,0:30:75.20:0,75,1174	0/0:29,0:29:21.06:0,21,325	1/1:19,9:28:71.20:812,71,0	1/1:6,10:16:36.09:427,36,0	1/1:32,13:45:63.16:752,63,0	1/1:24,8:31:68.82:788,69,0	1/1:26,7:34:42.02:509,42,0	0/0:30,0:30:2.97:0,3,24	0/0:34,0:34:36.09:0,36,545	0/0:20,0:20:15.03:0,15,210	1/1:16,0:16:35.11:446,35,0	0/0:24,0:22:36.07:0,36,499	0/0:10,0:10:9.01:0,9,126	1/1:68,7:72:99:1748,144,0	0/0:30,0:30:13.70:0,14,219	1/1:17,6:23:45.14:565,45,0	1/1:27,4:31:33.04:381,33,0	0/0:22,0:22:23.55:0,24,334	0/0:33,1:33:13.93:0,14,1314	0/0:28,0:28:81.28:0,81,1350	0/0:10,0:10:30.10:0,30,500
chr10	5649160	.	TACACACACAGAC	T	1320.46	PASS	AB=0.656;AC=13;AF=0.232;AN=56;BaseQRankSum=-0.207;DP=883;FS=4.062;HRun=0;HaplotypeScore=363.4751;InbreedingCoeff=0.6481;MQ=49.95;MQ0=23;MQRankSum=-4.802;QD=7.22;ReadPosRankSum=-1.811;VQSLOD=1.2167;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:66,0:71:32.89:0,33,1705	0/0:10,0:11:21.07:0,21,579	0/0:67,0:20:45.19:0,45,1261	0/0:78,0:22:19.88:0,20,1207	0/0:29,0:33:51.18:0,51,1388	0/0:11,0:17:23.61:0,24,874	0/0:28,0:34:33.44:0,33,1121	0/0:36,0:35:93.31:0,93,3799	1/1:5,15:21:4.99:183,5,0	0/0:22,0:30:72.99:0,73,2395	0/0:11,0:14:27.08:0,27,788	0/0:39,0:47:78.14:0,78,2349	0/0:27,0:36:68.91:0,69,2010	0/0:30,0:35:30:0,30,1306	0/1:3,26:31:0.02:0,0,2	1/1:4,24:30:14.96:544,15,0	0/1:6,10:16:5.16:313,0,5	0/1:17,0:17:2.75:3,0,1157	1/1:11,2:10:17.97:312,18,0	0/1:2,4:7:0.01:0,0,1	0/0:58,0:55:92.04:0,92,3453	0/1:6,24:30:1.76:2,0,2	0/0:16,0:25:42:0,42,1169	0/0:23,0:28:24.08:0,24,772	1/1:4,13:18:1.79:108,2,0	0/0:38,0:37:87.30:0,87,3981	0/0:27,0:27:69.20:0,69,2907	0/0:11,0:10:30.10:0,30,1509
chr10	5649181	.	ACACTCTCT	A	153.86	PASS	AB=0.973;AC=14;AF=0.250;AN=56;BaseQRankSum=5.138;DP=912;FS=4.232;HRun=0;HaplotypeScore=325.6629;InbreedingCoeff=0.1458;MQ=51.84;MQ0=15;MQRankSum=-2.655;QD=0.52;ReadPosRankSum=-4.051;VQSLOD=1.2854;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:69,0:69:38.12:0,38,1602	0/1:13,0:13:34.94:35,0,662	0/0:69,0:28:22.32:0,22,1215	0/0:116,0:42:47.70:0,48,2188	0/0:29,0:29:56.98:0,57,1973	0/0:18,1:19:17.71:0,18,671	0/0:33,1:34:18.29:0,18,863	0/0:36,0:35:99:0,105,3415	1/1:21,1:22:2.49:10,2,0	0/1:28,1:29:99:105,0,2651	0/0:11,0:11:12.02:0,12,497	0/1:41,3:44:12.92:13,0,1803	0/1:31,1:31:46.63:47,0,1958	0/0:33,0:33:31.32:0,31,1192	0/1:33,3:36:0.15:2,0,0	0/1:28,2:30:6.20:45,0,6	0/1:17,0:17:2.62:14,0,3	0/1:14,0:14:8.92:9,0,956	0/0:10,0:8:15.88:0,16,229	0/1:14,0:14:0.53:1,0,1	0/0:52,1:49:89.32:0,89,3193	1/1:33,0:32:1.72:5,2,0	0/0:27,0:27:23.23:0,23,1119	0/0:26,1:27:19.98:0,20,794	0/0:21,0:20:1.72:0,2,5	0/0:36,0:35:99:0,105,3764	0/0:22,0:22:57.15:0,57,1987	0/1:14,0:13:4.78:5,0,1111
chr10	5649183	.	ACTCTCT	A	111.38	PASS	AB=0.946;AC=14;AF=0.250;AN=56;BaseQRankSum=4.835;DP=913;FS=1.796;HRun=0;HaplotypeScore=308.2765;InbreedingCoeff=0.0710;MQ=52.24;MQ0=15;MQRankSum=-3.772;QD=0.37;ReadPosRankSum=-3.524;VQSLOD=1.5344;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:67,2:69:35.81:0,36,1452	0/1:11,2:13:34.99:35,0,642	0/0:73,0:28:48.97:0,49,1363	0/0:115,0:45:99:0,104,2297	0/0:28,0:29:56.88:0,57,1946	0/0:20,0:20:17.32:0,17,563	0/0:31,0:32:18.34:0,18,756	0/0:37,0:36:99:0,108,3154	1/1:21,1:22:2.99:26,3,0	0/1:30,0:32:40.04:40,0,2565	0/0:10,0:10:12.04:0,12,427	0/1:41,1:43:17.12:17,0,1570	0/1:31,0:31:28.45:28,0,1750	0/0:31,0:32:30.75:0,31,1023	0/1:36,0:36:0.20:2,0,0	0/1:30,0:30:44.33:53,0,44	0/1:16,0:17:10.64:18,0,11	0/1:14,0:14:21.23:21,0,824	0/0:10,0:8:17.91:0,18,244	0/1:10,4:14:0.41:1,0,0	0/0:53,0:49:87.96:0,88,3000	1/1:33,0:32:1.25:5,1,0	0/0:26,0:27:23.14:0,23,1085	0/0:26,0:27:19.77:0,20,767	0/0:20,0:19:4.52:0,5,23	0/0:37,0:36:99:0,108,3328	0/0:21,0:21:57.15:0,57,1706	0/1:14,0:13:3.78:4,0,954
chr10	5649201	.	ACACTCTCT	A	1274.50	PASS	AB=0.985;AC=17;AF=0.304;AN=56;BaseQRankSum=4.729;DP=903;FS=11.427;HRun=0;HaplotypeScore=284.2973;InbreedingCoeff=-0.1813;MQ=47.93;MQ0=26;MQRankSum=-4.208;QD=3.28;ReadPosRankSum=-1.725;VQSLOD=0.6923;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:60,0:59:34.93:0,35,990	0/1:11,0:9:50.99:51,0,114	0/0:96,0:24:50.51:0,51,1029	0/0:122,0:43:97.15:0,97,2312	0/0:20,1:20:21.06:0,21,598	0/1:18,1:19:5.51:6,0,438	0/1:30,1:31:45.51:46,0,576	0/0:28,0:28:78.25:0,78,2368	1/1:23,0:23:0.47:1,0,0	0/1:22,1:23:99:107,0,1614	0/0:19,0:17:9.03:0,9,371	0/1:38,3:41:99:130,0,1134	0/1:29,0:28:66.30:66,0,1113	0/0:31,0:31:20.58:0,21,774	0/1:28,0:28:0.56:1,0,1	0/1:29,0:29:99:153,0,113	0/1:18,0:18:15.83:16,0,80	0/0:15,0:15:23.57:0,24,849	0/1:18,0:16:81.70:82,0,380	0/1:23,0:23:11.54:31,0,12	0/0:38,1:36:43.83:0,44,1473	1/1:28,0:27:1.66:4,2,0	0/0:26,0:26:16.83:0,17,430	0/0:24,1:25:8.82:0,9,294	0/0:20,0:19:0.84:0,1,57	0/1:48,0:47:99:542,0,2824	0/1:19,0:19:99:184,0,1285	0/0:11,0:11:11.90:0,12,693
chr10	5649203	.	ACTCTCT	A	1481.14	PASS	AB=0.859;AC=19;AF=0.339;AN=56;BaseQRankSum=3.949;DP=879;FS=14.324;HRun=0;HaplotypeScore=257.9088;InbreedingCoeff=-0.2094;MQ=45.72;MQ0=26;MQRankSum=-4.643;QD=3.81;ReadPosRankSum=-0.665;VQSLOD=0.4458;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:54,1:58:33.54:0,34,930	0/1:9,0:8:67.84:68,0,103	0/0:93,0:20:49.76:0,50,1012	0/0:121,0:43:99:0,103,2452	0/0:20,1:20:21.06:0,21,601	0/1:17,0:19:16.92:17,0,413	0/1:24,0:31:63:63,0,518	0/0:28,0:28:78.20:0,78,2327	1/1:15,2:22:0.89:2,1,0	0/1:20,1:22:73.48:73,0,1632	0/0:9,9:17:9.03:0,9,329	0/1:37,3:41:99:151,0,987	0/1:26,1:27:72.37:72,0,998	0/0:23,1:30:20.77:0,21,698	1/1:19,1:27:2.76:21,3,0	0/1:21,1:28:99:213,0,113	0/1:14,2:17:32.39:32,0,111	0/0:14,0:15:16.72:0,17,793	0/1:12,3:16:99:185,0,487	0/1:15,5:23:11.48:60,0,11	0/0:35,0:34:43.19:0,43,1284	1/1:21,1:25:0.82:4,1,0	0/0:22,1:24:16.83:0,17,414	0/0:20,2:23:9.03:0,9,267	0/0:19,0:19:0.48:0,0,54	0/1:44,3:46:99:534,0,2632	0/1:17,2:19:99:111,0,1099	0/1:8,1:11:26.53:27,0,596
chr10	5649204	.	CTCTCTCACACAG	C	1210.16	PASS	AB=0.983;AC=17;AF=0.304;AN=56;BaseQRankSum=3.665;DP=863;FS=21.798;HRun=0;HaplotypeScore=290.7952;InbreedingCoeff=-0.1901;MQ=45.70;MQ0=25;MQRankSum=-4.106;QD=3.28;ReadPosRankSum=-1.733;VQSLOD=1.1175;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:57:36.48:0,36,863	0/1:9,0:8:60.13:60,0,139	0/0:93,0:20:46.80:0,47,894	0/0:119,0:42:88.15:0,88,1953	0/0:20,0:19:21.06:0,21,521	0/1:18,0:18:14.11:14,0,350	0/1:31,0:31:4.64:5,0,458	0/0:26,0:26:68.76:0,69,1623	1/1:22,0:22:4.99:24,5,0	0/1:22,0:22:72:72,0,1527	0/0:20,0:18:9.03:0,9,298	0/1:41,0:41:99:126,0,948	0/1:28,0:27:97.94:98,0,916	0/0:30,0:30:10.56:0,11,602	0/0:27,0:27:2.67:0,3,11	0/1:28,0:28:99:179,0,115	0/1:15,0:15:11.27:11,0,83	0/0:13,0:13:28.32:0,28,725	0/1:18,0:16:61.26:61,0,440	0/1:23,0:23:11.15:29,0,11	0/0:34,0:31:44.57:0,45,1162	1/1:25,0:24:1.36:4,1,0	0/0:25,0:25:16.83:0,17,348	0/1:23,0:23:6.90:7,0,233	0/0:20,0:19:2.91:0,3,56	0/1:34,13:46:99:618,0,2603	0/1:18,0:18:54.86:55,0,1086	0/0:9,0:9:21.05:0,21,744
chr10	5650952	.	A	ATG	6235.46	PASS	AB=0.906;AC=43;AF=0.827;AN=52;BaseQRankSum=-4.589;DP=283;FS=19.684;HRun=0;HaplotypeScore=70.3266;InbreedingCoeff=0.4099;MQ=64.01;MQ0=0;MQRankSum=0.391;QD=24.94;ReadPosRankSum=3.100;VQSLOD=3.8192;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	1/1:1,1:2:5.89:66,6,0	0/1:9,0:3:6.28:6,0,8	0/0:19,0:8:11.08:0,11,66	1/1:1,15:16:30.10:510,30,0	1/1:1,20:21:36.12:612,36,0	1/1:1,10:11:18.06:306,18,0	1/1:9,22:31:60.14:910,60,0	1/1:7,1:8:2.22:7,2,0	1/1:0,11:11:33.08:509,33,0	1/1:2,10:12:24.08:408,24,0	1/1:1,4:5:12.04:204,12,0	1/1:0,4:4:9.03:153,9,0	1/1:0,9:9:18.06:306,18,0	0/1:4,0:4:0:0,0,0	0/1:5,0:5:0:0,0,0	1/1:12,0:12:5.87:56,6,0	1/1:5,8:13:27.05:427,27,0	1/1:10,0:10:17.62:114,18,0	0/0:4,3:7:5.17:0,5,21	1/1:0,3:4:6.02:102,6,0	./.	1/1:3,2:5:9.02:127,9,0	0/1:2,1:3:5.91:45,0,6	0/1:10,4:14:15.14:63,0,15	1/1:2,13:15:35.90:549,36,0	1/1:8,2:10:24.08:399,24,0	1/1:7,9:16:21.07:357,21,0
chr10	5650967	.	TAC	T	66.26	PASS	AB=0.857;AC=9;AF=0.188;AN=48;BaseQRankSum=0.409;DP=276;FS=2.452;HRun=0;HaplotypeScore=96.9742;InbreedingCoeff=0.5430;MQ=70.93;MQ0=1;MQRankSum=-0.599;QD=1.58;ReadPosRankSum=-3.215;VQSLOD=1.3999;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:2,0:2:6.02:0,6,98	0/0:17,0:7:0.16:0,0,7	0/0:28,0:14:7.33:0,7,86	0/0:16,0:16:11.15:0,11,509	0/0:19,0:19:36.12:0,36,613	0/0:11,0:11:27.08:0,27,441	0/0:26,0:26:23.72:0,24,764	1/1:7,1:8:2.97:21,3,0	0/0:10,0:10:30.10:0,30,516	0/0:11,0:11:27.03:0,27,404	0/0:4,0:4:12.04:0,12,205	0/0:4,0:4:9.03:0,9,152	0/0:9,1:10:20.99:0,21,365	./.	./.	1/1:5,3:9:7.23:50,7,0	0/0:14,0:14:20.56:0,21,449	1/1:5,1:6:5.93:45,6,0	1/1:4,3:7:6.01:60,6,0	0/0:4,0:4:9.01:0,9,127	./.	0/0:4,0:4:6.02:0,6,102	0/0:6,0:6:18.06:0,18,300	0/0:9,1:10:2.99:0,3,25	0/0:17,0:17:44.99:0,45,688	0/1:10,2:12:20.46:20,0,303	0/0:10,0:10:24.04:0,24,371
chr10	5650968	.	ACATATATATATATGCGTG	A	946.43	PASS	AB=0.889;AC=9;AF=0.167;AN=54;BaseQRankSum=2.087;DP=266;FS=2.714;HRun=0;HaplotypeScore=150.6060;InbreedingCoeff=0.6154;MQ=70.33;MQ0=1;MQRankSum=-2.745;QD=32.64;ReadPosRankSum=-0.716;VQSLOD=2.8503;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:2,0:2:6.02:0,6,515	0/0:16,0:6:10.10:0,10,94	0/0:29,0:14:12.51:0,13,235	0/0:16,0:16:36.12:0,36,2699	0/0:20,0:20:39.13:0,39,2826	0/0:10,0:10:27.09:0,27,2175	0/0:25,0:25:54.95:0,55,3842	1/1:3,4:7:2.58:155,3,0	0/0:10,0:10:30.10:0,30,2385	0/0:11,0:11:27.09:0,27,1947	0/0:5,0:5:15.05:0,15,1210	0/0:4,0:4:9.03:0,9,761	0/0:10,0:10:20.99:0,21,1702	0/0:2,1:3:0.47:0,0,1	0/0:1,0:1:0.47:0,0,1	1/1:5,0:5:9.03:422,9,0	0/0:14,0:14:20.67:0,21,2375	1/1:1,1:2:6.02:310,6,0	1/1:6,1:7:6.02:184,6,0	0/0:5,0:5:9.03:0,9,660	0/0:2,4:6:0:0,0,0	0/0:4,0:4:6.02:0,6,472	0/0:7,0:7:21.07:0,21,1718	0/1:7,1:8:1.04:1,0,10	0/0:17,0:17:45.15:0,45,3581	0/0:12,0:12:3.51:0,4,1614	0/0:10,0:10:24.08:0,24,1838
chr10	5650971	.	TATATATATATGCGTGTGCATGCGC	T	1093.49	PASS	AC=8;AF=0.148;AN=54;BaseQRankSum=2.149;DP=268;FS=1.311;HRun=0;HaplotypeScore=174.3807;InbreedingCoeff=0.6784;MQ=71.08;MQ0=1;MQRankSum=-4.361;QD=49.70;ReadPosRankSum=-0.015;VQSLOD=2.5572;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/0:2,0:2:6.02:0,6,582	0/0:18,0:7:8.76:0,9,90	0/0:33,0:15:17.53:0,18,301	0/0:16,0:16:36.12:0,36,3019	0/0:19,0:19:39.13:0,39,3094	0/0:10,0:10:27.09:0,27,2350	0/0:22,0:22:60.21:0,60,4212	1/1:6,1:7:2.50:181,2,0	0/0:10,0:10:30.10:0,30,2473	0/0:11,0:11:27.09:0,27,2075	0/0:5,0:5:15.05:0,15,1350	0/0:4,0:4:9.03:0,9,830	0/0:10,0:10:20.99:0,21,1858	0/0:1,2:3:0.47:0,0,1	0/0:1,0:1:0.47:0,0,1	1/1:3,3:6:12:520,12,0	0/0:14,0:14:33.58:0,34,2869	1/1:1,1:2:6.02:284,6,0	1/1:5,2:7:6.02:235,6,0	0/0:6,0:6:12.04:0,12,933	0/0:5,1:6:0:0,0,0	0/0:4,0:4:6.02:0,6,518	0/0:7,0:7:21.07:0,21,2073	0/0:6,1:7:1.06:0,1,3	0/0:17,0:17:45.15:0,45,4016	0/0:11,0:11:27.09:0,27,2018	0/0:10,0:10:24.08:0,24,1952
chr10	5650974	.	ATATATATG	A	190.35	PASS	AB=1.000;AC=11;AF=0.204;AN=54;BaseQRankSum=4.567;DP=265;FS=0.000;HRun=0;HaplotypeScore=115.3562;InbreedingCoeff=0.6251;MQ=70.90;MQ0=1;MQRankSum=-3.606;QD=4.14;ReadPosRankSum=0.034;VQSLOD=2.1390;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	0/0:2,0:2:6.02:0,6,277	0/1:18,0:7:5.89:6,0,48	0/0:35,0:15:20.59:0,21,290	0/0:16,0:16:36.12:0,36,1525	0/0:19,0:19:42.14:0,42,1760	0/0:10,0:10:27.09:0,27,1215	0/0:20,0:20:54.19:0,54,2211	1/1:6,1:7:2.95:55,3,0	0/0:10,0:10:30.10:0,30,1334	0/0:11,0:11:27.09:0,27,1090	0/0:5,0:5:15.05:0,15,630	0/0:4,0:4:9.03:0,9,416	0/0:9,0:9:20.99:0,21,971	0/0:3,0:3:0.47:0,0,1	0/0:1,0:1:0.47:0,0,1	1/1:5,0:5:8.82:120,9,0	0/0:15,0:15:36.12:0,36,1406	1/1:2,0:2:6.02:110,6,0	1/1:4,3:7:3.76:17,4,0	0/0:6,0:6:12.04:0,12,412	0/0:5,1:6:0:0,0,0	0/0:4,0:4:6.02:0,6,278	0/0:8,0:8:21.07:0,21,901	1/1:2,5:7:2.81:18,3,0	0/0:16,0:16:45.15:0,45,2061	0/0:10,0:10:27.09:0,27,1009	0/0:9,0:9:24.08:0,24,1019
chr10	5650983	.	CGTGT	C	48.26	PASS	AB=1.000;AC=9;AF=0.173;AN=52;BaseQRankSum=4.397;DP=294;FS=1.610;HRun=0;HaplotypeScore=107.1255;InbreedingCoeff=0.6089;MQ=67.71;MQ0=7;MQRankSum=-3.540;QD=1.66;ReadPosRankSum=0.469;VQSLOD=2.1462;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	0/0:4,0:4:9.03:0,9,251	0/0:21,0:7:2.48:0,2,31	0/0:46,0:14:13.06:0,13,160	0/0:14,0:14:36.10:0,36,850	0/0:19,0:19:45.12:0,45,992	0/0:11,0:11:30.10:0,30,823	0/0:19,0:19:48.16:0,48,1196	1/1:6,1:7:2.74:35,3,0	0/0:10,0:10:27.09:0,27,738	0/0:9,0:9:24.08:0,24,594	0/0:7,0:7:21.07:0,21,585	0/0:5,0:5:12.04:0,12,307	0/0:12,0:12:30.02:0,30,772	0/0:3,0:3:0:0,0,0	0/0:1,0:1:0:0,0,0	0/1:6,0:5:3.90:51,0,4	0/0:15,0:15:39.10:0,39,943	1/1:2,0:2:6.01:59,6,0	1/1:4,3:7:2.68:11,3,0	0/0:9,0:9:18.06:0,18,480	./.	0/0:8,0:8:11.83:0,12,331	0/0:9,0:9:21.07:0,21,586	1/1:2,5:7:2.84:14,3,0	0/0:16,0:16:45.15:0,45,1177	0/0:11,0:11:30.10:0,30,770	0/0:9,0:9:24.08:0,24,624
chr10	5651004	.	GCA	G	1452.27	PASS	AB=0.957;AC=29;AF=0.690;AN=42;BaseQRankSum=-0.008;DP=342;FS=0.000;HRun=0;HaplotypeScore=93.6619;InbreedingCoeff=0.4329;MQ=49.27;MQ0=18;MQRankSum=1.922;QD=7.19;ReadPosRankSum=1.231;VQSLOD=3.0805;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	1/1:2,3:4:6.02:65,6,0	./.	./.	1/1:14,0:14:3.01:33,3,0	1/1:9,5:14:17.53:165,18,0	1/1:9,3:12:9.02:98,9,0	./.	0/0:15,0:15:2.29:0,2,6	0/0:6,0:6:6.01:0,6,68	0/0:8,0:8:9.03:0,9,131	1/1:8,2:10:15:145,15,0	./.	1/1:9,3:13:17.88:177,18,0	./.	0/1:5,0:5:0.13:0,0,0	1/1:15,0:13:2.84:14,3,0	1/1:12,6:18:22.86:232,23,0	0/1:11,0:11:2.42:2,0,37	0/0:10,0:9:0.47:0,0,1	1/1:9,2:9:5.81:66,6,0	./.	1/1:8,0:10:9:86,9,0	1/1:10,3:13:17.86:168,18,0	1/1:17,0:17:2.74:12,3,0	0/1:17,3:19:22.07:105,0,22	1/1:3,9:12:20.89:209,21,0	0/0:7,0:8:0.89:0,1,2
chr10	5651008	.	A	ACGCG	160.47	PASS	AB=0.878;AC=3;AF=0.056;AN=54;BaseQRankSum=-1.517;DP=359;FS=1.267;HRun=0;HaplotypeScore=106.6994;InbreedingCoeff=0.0654;MQ=45.10;MQ0=20;MQRankSum=-3.574;QD=4.01;ReadPosRankSum=-1.800;VQSLOD=1.8282;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:2,0:1:3:0,3,28	0/0:5,0:4:6.02:0,6,76	0/0:8,0:1:0.89:0,1,2	0/0:33,0:5:12:0,12,179	0/0:15,0:15:30.08:0,30,430	0/0:15,0:15:32.45:0,32,425	0/0:13,0:12:30.07:0,30,457	0/0:15,0:15:29.17:0,29,453	0/0:16,0:16:7.71:0,8,58	0/1:8,0:7:10.40:10,0,256	0/0:10,0:8:18.06:0,18,326	0/0:9,0:9:23.99:0,24,334	0/0:7,0:7:12.03:0,12,171	0/0:13,0:13:24.87:0,25,381	0/0:12,0:11:0.47:0,0,1	0/0:6,0:6:3.47:0,3,26	0/0:19,1:18:12.78:0,13,141	0/0:18,0:18:25.28:0,25,448	0/1:7,6:13:67.34:218,0,67	0/0:9,1:9:6:0,6,61	0/0:12,0:10:11.83:0,12,174	./.	0/0:10,0:10:6.51:0,7,175	0/0:14,0:14:18.12:0,18,344	0/1:18,0:19:12.65:26,0,13	0/0:20,0:19:52.41:0,52,775	0/0:13,0:12:4.44:0,4,292	0/0:7,0:7:18.06:0,18,291
chr10	5654335	.	A	AT	5728.98	PASS	AB=0.825;AC=26;AF=0.464;AN=56;BaseQRankSum=-6.067;DP=438;FS=8.587;HRun=8;HaplotypeScore=131.3371;InbreedingCoeff=0.8141;MQ=61.67;MQ0=1;MQRankSum=-3.051;QD=25.92;ReadPosRankSum=1.105;VQSLOD=3.4186;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,13:20:33.09:376,33,0	0/0:9,0:9:21.01:0,21,192	0/0:9,0:9:16.56:0,17,140	0/1:10,0:9:19.20:19,0,67	0/0:37,1:37:52.60:0,53,726	0/0:18,0:17:51.02:0,51,466	0/0:12,0:11:33.02:0,33,302	1/1:12,13:25:57.12:634,57,0	1/1:2,6:8:12.03:138,12,0	0/0:29,0:29:75.01:0,75,683	0/0:19,0:19:35.99:0,36,329	0/0:17,0:17:48.02:0,48,439	0/0:15,0:15:39.02:0,39,357	0/0:18,0:18:35.99:0,36,329	1/1:2,6:8:21.06:242,21,0	1/1:2,12:13:39.11:447,39,0	1/1:8,8:15:33.10:379,33,0	0/0:12,0:11:24.01:0,24,220	1/1:3,8:11:27.08:311,27,0	1/1:5,19:24:66.19:757,66,0	0/0:3,0:3:3:0,3,27	0/1:7,4:11:6.45:171,0,6	0/0:12,0:12:27.01:0,27,247	0/0:6,0:6:2.75:0,3,27	1/1:1,31:32:90.26:1028,90,0	1/1:2,10:12:30.09:346,30,0	1/1:3,19:22:57.16:650,57,0	1/1:0,7:7:21.04:230,21,0
chr10	5654349	.	GA	G	11525.33	PASS	AB=0.917;AC=49;AF=0.907;AN=54;BaseQRankSum=1.344;DP=403;FS=13.525;HRun=4;HaplotypeScore=118.0764;InbreedingCoeff=0.6332;MQ=50.48;MQ0=1;MQRankSum=-3.901;QD=29.78;ReadPosRankSum=2.770;VQSLOD=3.2935;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:12,4:16:27.05:304,27,0	1/1:4,3:7:18.05:214,18,0	0/0:5,0:4:7.05:0,7,116	0/0:10,0:8:5.61:0,6,80	1/1:38,3:41:99:1313,114,0	1/1:20,1:20:60.17:699,60,0	1/1:9,3:11:30.09:354,30,0	1/1:18,1:18:48.13:552,48,0	1/1:5,1:6:12.04:142,12,0	1/1:25,1:26:67.30:847,67,0	1/1:18,2:20:54.16:630,54,0	1/1:15,0:15:45.12:520,45,0	1/1:13,0:13:36.10:418,36,0	1/1:13,0:13:36.10:413,36,0	1/1:5,2:7:18.04:201,18,0	1/1:10,2:11:30.09:354,30,0	1/1:14,1:14:26.97:317,27,0	1/1:10,3:13:30.09:357,30,0	0/1:10,1:10:17.93:226,0,18	1/1:21,2:23:62.88:716,63,0	./.	1/1:6,1:7:18.05:212,18,0	1/1:12,1:13:36.11:422,36,0	1/1:4,1:5:8.36:90,8,0	1/1:32,0:32:90.27:1052,90,0	1/1:10,1:11:27.08:320,27,0	1/1:19,1:20:57.17:670,57,0	1/1:9,0:9:17.72:182,18,0
chr10	5654352	.	A	AT	11142.47	PASS	AB=1.000;AC=51;AF=0.944;AN=54;BaseQRankSum=0.442;DP=411;FS=21.831;HRun=0;HaplotypeScore=124.8817;InbreedingCoeff=0.5213;MQ=51.85;MQ0=1;MQRankSum=-4.825;QD=27.58;ReadPosRankSum=3.686;VQSLOD=3.5266;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,6:15:29.80:300,30,0	1/1:3,3:6:17.03:161,17,0	0/0:6,0:5:14.26:0,14,156	0/1:9,0:8:21.53:22,0,67	1/1:9,31:39:99:1271,114,0	1/1:5,16:20:60.02:700,60,0	1/1:5,8:12:30.90:314,31,0	1/1:5,13:17:47.99:534,48,0	1/1:3,2:5:11.87:120,12,0	1/1:4,23:27:70.41:864,70,0	1/1:8,15:23:56.65:637,57,0	1/1:1,14:15:45.12:521,45,0	1/1:2,11:14:36.11:419,36,0	1/1:7,9:16:35.97:414,36,0	1/1:3,4:7:17.90:180,18,0	1/1:5,6:11:29.18:285,29,0	1/1:8,7:14:26.65:292,27,0	1/1:8,7:15:29.68:295,30,0	1/1:7,6:12:4.98:233,5,0	1/1:9,16:25:62.52:672,63,0	./.	1/1:4,4:8:12.08:172,12,0	1/1:2,11:13:37.35:426,37,0	1/1:1,4:5:8.52:91,9,0	1/1:1,29:30:90.27:1055,90,0	1/1:3,9:12:28.22:304,28,0	1/1:1,18:19:57.17:677,57,0	1/1:3,6:9:17.87:183,18,0
chr10	5654356	.	TA	T	8960.09	PASS	AB=0.683;AC=45;AF=0.833;AN=54;BaseQRankSum=4.110;DP=417;FS=0.000;HRun=1;HaplotypeScore=132.9402;InbreedingCoeff=0.2158;MQ=52.15;MQ0=1;MQRankSum=-7.388;QD=22.29;ReadPosRankSum=9.107;VQSLOD=4.1157;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,6:14:6.24:180,6,0	0/1:3,3:6:18.59:72,0,19	0/0:5,0:4:4.07:0,4,59	0/0:9,0:8:4.69:0,5,40	1/1:11,31:41:80.66:1011,81,0	1/1:5,16:21:50.87:584,51,0	1/1:5,8:12:7.76:229,8,0	1/1:4,13:16:35.94:431,36,0	0/1:2,2:4:0.13:77,0,0	1/1:6,24:30:70.77:773,71,0	1/1:7,16:23:49.26:549,49,0	1/1:0,14:14:42.08:415,42,0	1/1:2,12:14:37.89:367,38,0	1/1:6,9:15:33.88:346,34,0	1/1:4,4:8:5.99:124,6,0	0/1:7,6:12:17.70:181,0,18	1/1:8,8:15:13.02:261,13,0	0/1:8,7:15:13.75:173,0,14	0/1:9,6:13:50.42:137,0,50	1/1:9,16:25:28.02:490,28,0	./.	1/1:3,4:7:15.35:151,15,0	1/1:1,12:13:26.75:328,27,0	1/1:0,4:5:11.78:98,12,0	1/1:2,29:31:93.16:919,93,0	1/1:6,9:15:26.94:345,27,0	1/1:1,18:19:57.11:561,57,0	1/1:1,6:7:17.92:158,18,0
chr10	5654357	.	A	AT	13704.95	PASS	AB=0.875;AC=49;AF=0.907;AN=54;BaseQRankSum=-2.635;DP=423;FS=5.096;HRun=3;HaplotypeScore=117.7516;InbreedingCoeff=0.3423;MQ=53.62;MQ0=1;MQRankSum=-4.870;QD=32.87;ReadPosRankSum=3.581;VQSLOD=4.3178;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,7:17:24.08:331,24,0	1/1:6,0:6:9.03:124,9,0	0/0:5,0:4:7.26:0,7,68	0/1:8,0:9:6.53:7,0,52	1/1:38,5:42:99:1454,108,0	1/1:19,1:19:60.20:826,60,0	1/1:11,3:13:30.10:414,30,0	1/1:16,2:17:45.15:622,45,0	1/1:4,0:4:9.03:125,9,0	1/1:25,6:31:88.16:1187,88,0	1/1:19,3:23:63.21:860,63,0	1/1:14,0:14:42.14:579,42,0	1/1:12,2:14:39.13:533,39,0	1/1:11,4:15:39.13:538,39,0	1/1:5,2:7:15.05:207,15,0	1/1:12,1:12:24.08:328,24,0	1/1:16,1:16:30.06:388,30,0	1/1:12,3:15:24.08:333,24,0	0/1:10,5:13:5.90:346,0,6	1/1:18,5:23:60.20:829,60,0	./.	0/1:6,1:7:9.81:228,0,10	1/1:14,0:14:36.12:494,36,0	1/1:5,0:5:11.92:150,12,0	1/1:31,0:31:93.31:1275,93,0	1/1:10,6:16:36.12:493,36,0	1/1:19,0:19:57.19:785,57,0	1/1:7,0:7:18.06:249,18,0
chr10	5654516	.	TTG	T	716.89	PASS	AB=0.975;AC=20;AF=0.357;AN=56;BaseQRankSum=7.195;DP=679;FS=8.739;HRun=0;HaplotypeScore=170.1655;InbreedingCoeff=-0.0072;MQ=56.77;MQ0=14;MQRankSum=-3.321;QD=1.87;ReadPosRankSum=2.430;VQSLOD=2.0745;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:31,0:36:34.99:58,0,35	0/1:16,0:16:5.32:5,0,397	0/0:37,0:16:11.74:0,12,130	0/0:25,0:13:15.40:0,15,171	0/0:24,1:25:18.41:0,18,731	0/1:18,1:19:8.66:9,0,355	0/1:33,2:35:44.14:44,0,698	0/1:23,2:24:20.91:21,0,540	0/1:22,0:22:27.31:59,0,27	0/1:26,2:28:11.33:11,0,715	0/0:17,0:17:42.12:0,42,620	0/1:24,1:25:17.34:17,0,705	0/0:24,1:26:18.51:0,19,741	0/0:26,0:26:48.16:0,48,763	1/1:17,0:17:32.42:224,32,0	0/1:12,0:12:3.79:59,0,4	0/1:24,0:24:37.03:50,0,37	0/0:23,1:24:12.36:0,12,624	0/1:30,0:29:51.82:52,0,171	1/1:30,0:30:3.43:98,3,0	0/0:39,2:41:42.49:0,42,1121	1/1:12,0:12:11.04:71,11,0	0/1:13,0:13:1.35:1,0,284	0/0:41,1:42:48.45:0,48,1213	0/1:24,0:24:2.84:100,0,3	0/0:19,1:20:18.38:0,18,743	0/0:12,0:12:24.07:0,24,357	0/1:14,1:14:2.53:3,0,403
chr10	5654537	.	T	TGTGTGTGC	7257.19	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-3.362;DP=738;FS=6.708;HRun=0;HaplotypeScore=249.1557;InbreedingCoeff=0.9642;MQ=47.98;MQ0=21;MQRankSum=-7.858;QD=34.56;ReadPosRankSum=-0.196;VQSLOD=3.6412;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:33,1:35:16.16:433,16,0	0/0:15,0:15:29.35:0,29,802	0/0:41,0:11:6.45:0,6,222	0/0:37,0:9:7.40:0,7,176	0/0:29,0:29:66.06:0,66,1442	0/0:16,0:16:32.79:0,33,676	0/0:33,0:33:63.88:0,64,1244	0/0:29,0:28:74.59:0,75,987	1/1:12,7:22:33.63:1000,34,0	0/0:24,0:24:71.22:0,71,1432	0/0:17,0:17:39.10:0,39,1007	0/0:28,0:28:65.88:0,66,1404	0/0:27,0:27:66.01:0,66,1392	0/0:28,0:28:60.13:0,60,1491	1/1:6,9:18:33.07:1318,33,0	1/1:6,2:10:14.95:517,15,0	1/1:16,4:24:50.64:1113,51,0	0/0:28,0:28:40.57:0,41,1320	1/1:23,4:27:58.54:1199,59,0	1/1:16,7:32:35.72:749,36,0	0/0:62,0:59:99:0,126,2429	1/1:8,2:12:14.76:347,15,0	0/0:16,0:16:33:0,33,578	0/0:49,0:49:99:0,117,2378	1/1:15,6:26:20.20:581,20,0	0/0:23,0:23:64.27:0,64,1387	0/0:11,0:11:29.58:0,30,552	0/0:15,0:14:33.06:0,33,706
chr10	5654562	.	CTGTG	C	10492.62	PASS	AB=0.802;AC=36;AF=0.643;AN=56;BaseQRankSum=-5.396;DP=721;FS=1.399;HRun=0;HaplotypeScore=189.4733;InbreedingCoeff=0.7194;MQ=48.55;MQ0=18;MQRankSum=2.156;QD=22.00;ReadPosRankSum=4.003;VQSLOD=4.7947;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:38:2.09:0,2,65	1/1:2,12:14:30.10:506,30,0	0/0:30,0:6:0.89:0,1,2	0/0:34,0:9:8.46:0,8,69	1/1:8,18:28:27.08:456,27,0	1/1:2,15:17:27.09:456,27,0	1/1:9,22:33:38.09:617,38,0	1/1:9,0:24:40.70:336,41,0	0/0:13,0:25:3.58:0,4,137	1/1:6,16:22:48.15:757,48,0	1/1:3,8:11:12.04:203,12,0	1/1:8,24:32:51.17:846,51,0	1/1:3,24:28:60.20:959,60,0	1/1:4,21:25:32.98:531,33,0	0/1:11,0:24:2.43:2,0,13	1/1:4,0:16:2.34:8,2,0	0/0:12,0:21:21.07:0,21,327	0/1:9,17:26:1.45:601,0,1	0/0:15,0:21:34.67:0,35,565	0/0:20,0:36:8.58:0,9,60	1/1:22,45:65:82.11:1745,82,0	0/0:5,0:10:6.02:0,6,109	1/1:4,12:16:18.06:304,18,0	1/1:8,36:44:81.19:1363,81,0	0/0:17,0:27:2.97:0,3,53	1/1:6,0:23:50.69:441,51,0	1/1:3,0:12:21.02:195,21,0	1/1:4,0:14:18.02:167,18,0
chr10	5655386	.	A	ATATCTATC	15955.10	PASS	AB=0.856;AC=49;AF=0.875;AN=56;BaseQRankSum=-2.129;DP=568;FS=10.118;HRun=0;HaplotypeScore=193.6864;InbreedingCoeff=0.4687;MQ=51.05;MQ0=5;MQRankSum=-1.187;QD=29.77;ReadPosRankSum=0.585;VQSLOD=3.8853;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:17,0:24:99:110,0,204	1/1:10,0:12:21.04:502,21,0	0/0:21,0:13:9.01:0,9,155	0/0:11,0:8:6.02:0,6,111	1/1:24,0:29:36.12:957,36,0	1/1:19,0:24:48.13:1194,48,0	1/1:18,0:17:24.65:462,25,0	1/1:52,0:44:49.35:761,49,0	1/1:6,9:16:15.05:619,15,0	1/1:25,0:30:46.49:1523,46,0	1/1:14,0:20:38.73:1076,39,0	1/1:7,0:12:24.08:680,24,0	1/1:10,0:14:14.24:425,14,0	1/1:10,0:23:15.05:512,15,0	1/1:6,12:20:18.06:738,18,0	1/1:7,14:23:30.03:1130,30,0	1/1:14,0:15:8.64:167,9,0	1/1:15,0:17:24.08:498,24,0	1/1:16,6:22:33.11:894,33,0	0/1:14,10:26:33.40:587,0,33	1/1:10,0:10:9.92:211,10,0	1/1:5,4:9:3.01:122,3,0	1/1:10,0:16:9.03:161,9,0	0/1:11,0:12:0:0,0,0	1/1:8,12:23:24.08:962,24,0	1/1:21,0:26:49.92:823,50,0	1/1:21,0:24:30.88:425,31,0	1/1:8,0:12:21.01:415,21,0
chr10	5655414	.	C	CT	4189.18	PASS	AB=0.810;AC=23;AF=0.411;AN=56;BaseQRankSum=5.731;DP=487;FS=5.630;HRun=1;HaplotypeScore=163.0779;InbreedingCoeff=-0.6719;MQ=42.70;MQ0=11;MQRankSum=-5.688;QD=9.95;ReadPosRankSum=1.221;VQSLOD=1.5983;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:18,2:19:22.21:22,0,110	0/1:5,4:9:97.09:180,0,97	0/0:18,0:6:14.98:0,15,187	0/0:8,0:4:9.03:0,9,126	0/1:19,7:25:99:176,0,159	0/1:16,6:22:99:276,0,163	0/1:5,10:14:90.40:327,0,90	0/1:33,18:37:99:532,0,822	0/1:12,0:12:14.29:14,0,144	0/1:18,11:30:99:501,0,414	0/1:19,2:20:99:224,0,148	0/1:7,4:11:75.62:221,0,76	0/1:9,4:12:42.37:216,0,42	0/1:13,1:14:64.72:66,0,65	0/1:19,0:19:24.75:25,0,318	0/1:18,0:18:45.28:45,0,193	0/1:8,5:13:74.49:74,0,188	0/1:9,2:11:99:163,0,157	0/0:16,0:16:15.29:0,15,444	0/0:20,0:20:4.22:0,4,381	0/1:5,4:9:68.57:84,0,69	0/0:4,0:4:7.84:0,8,89	0/1:10,6:14:68.83:127,0,69	0/1:4,1:4:0:0,0,0	0/1:19,0:19:10.30:10,0,193	0/1:16,11:26:99:464,0,498	0/1:17,11:28:99:350,0,464	0/1:9,3:11:90.21:90,0,260
chr10	5655424	.	TTATTTGTA	T	2948.40	PASS	AB=0.945;AC=20;AF=0.357;AN=56;BaseQRankSum=6.668;DP=470;FS=5.637;HRun=0;HaplotypeScore=210.8891;InbreedingCoeff=-0.5685;MQ=44.03;MQ0=10;MQRankSum=-8.439;QD=8.12;ReadPosRankSum=-3.938;VQSLOD=1.5466;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:20:6.02:0,6,901	0/1:7,3:10:99:203,0,623	0/0:17,0:5:7.36:0,7,259	0/0:9,0:4:6.02:0,6,182	0/1:25,3:27:99:152,0,1198	0/1:20,1:21:99:130,0,1139	0/1:9,4:12:99:287,0,454	0/0:33,0:24:66.21:0,66,2563	0/1:13,0:13:99:132,0,763	0/1:26,6:32:99:468,0,1776	0/1:21,2:22:99:281,0,1442	0/1:9,1:10:99:303,0,540	0/1:14,1:14:99:207,0,755	0/1:12,0:12:84.68:85,0,438	0/1:20,0:20:99:151,0,1553	0/1:19,0:19:99:218,0,1180	0/1:11,0:12:17.29:17,0,1111	0/1:8,1:9:99:119,0,785	0/1:16,0:16:5.08:5,0,1274	0/1:26,0:26:22.90:23,0,2589	0/0:5,1:6:13.29:0,13,457	0/0:6,0:6:15.05:0,15,640	0/1:11,0:11:28.88:29,0,716	0/0:4,0:3:0.28:0,0,1	0/1:23,0:23:19.97:20,0,1840	0/1:20,0:23:99:229,0,2005	0/1:20,0:24:44.79:45,0,2006	0/0:9,0:11:18.97:0,19,937
chr10	5655445	.	ATCTG	A	2511.78	PASS	AB=0.630;AC=7;AF=0.125;AN=56;BaseQRankSum=0.516;DP=485;FS=3.405;HRun=0;HaplotypeScore=195.0019;InbreedingCoeff=0.7025;MQ=46.63;MQ0=8;MQRankSum=-3.826;QD=28.54;ReadPosRankSum=0.684;VQSLOD=3.4510;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:33.11:0,33,848	0/0:12,0:12:18.06:0,18,485	0/0:18,0:3:9.03:0,9,216	0/0:10,0:3:3.01:0,3,66	0/0:29,0:28:47.82:0,48,1234	0/0:24,0:24:48.16:0,48,1263	0/0:9,0:9:12.01:0,12,320	1/1:6,7:6:12.01:159,12,0	0/0:13,0:13:27.09:0,27,700	0/0:30,0:30:69.60:0,70,1701	0/0:19,0:18:39.13:0,39,1008	0/0:11,0:11:24.08:0,24,631	0/0:16,0:15:36.12:0,36,951	0/0:11,0:11:18.06:0,18,486	0/0:22,0:22:54.19:0,54,1445	0/0:19,0:19:39.13:0,39,1053	0/0:17,0:17:42.13:0,42,1085	0/0:17,0:17:39.05:0,39,910	0/0:11,0:11:33.07:0,33,788	0/0:30,0:30:84.29:0,84,2243	0/0:5,0:5:12.04:0,12,323	0/0:7,0:7:18.06:0,18,485	0/0:21,0:19:45.15:0,45,1189	0/0:4,0:3:2.84:0,3,76	0/0:23,0:23:48.16:0,48,1294	0/1:12,17:28:34.21:802,0,34	1/1:11,23:34:47.18:1147,47,0	1/1:2,10:12:29.47:549,29,0
chr10	5655477	.	C	CATCT	10301.18	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-4.396;DP=527;FS=1.275;HRun=0;HaplotypeScore=132.1025;InbreedingCoeff=0.9520;MQ=52.66;MQ0=15;MQRankSum=-0.773;QD=42.92;ReadPosRankSum=3.653;VQSLOD=5.5523;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,14:23:9.35:724,9,0	1/1:2,8:10:24.08:599,24,0	0/0:16,0:8:21.07:0,21,336	0/0:14,0:7:15.05:0,15,230	1/1:4,22:25:51.17:1273,51,0	1/1:4,16:20:30.10:749,30,0	1/1:0,4:4:12.04:299,12,0	0/0:26,0:22:60.20:0,60,998	0/0:16,0:16:30.10:0,30,509	1/1:6,14:20:45.15:1071,45,0	1/1:5,19:23:30.10:749,30,0	1/1:2,9:12:24.08:599,24,0	1/1:1,15:14:36.12:898,36,0	1/1:4,9:13:30.10:722,30,0	0/0:26,0:26:69.24:0,69,1152	0/0:20,0:20:48.16:0,48,814	0/0:20,0:20:42.14:0,42,713	1/1:6,19:27:54.11:1205,54,0	0/0:13,0:12:27.09:0,27,458	0/0:34,0:34:87.30:0,87,1456	1/1:2,7:12:6.02:150,6,0	0/0:8,0:8:21.07:0,21,356	1/1:5,18:22:45.15:1113,45,0	1/1:3,4:7:5.91:149,6,0	0/0:26,0:26:60.18:0,60,967	0/0:24,0:25:61.69:0,62,1057	0/0:26,0:28:13.32:0,13,927	0/0:15,0:14:39.13:0,39,626
chr10	5655555	.	CATCT	C	7964.72	PASS	AB=0.952;AC=49;AF=0.980;AN=50;BaseQRankSum=2.412;DP=618;FS=3.217;HRun=0;HaplotypeScore=140.0228;InbreedingCoeff=-0.0254;MQ=52.70;MQ0=6;MQRankSum=1.084;QD=14.64;ReadPosRankSum=1.376;VQSLOD=4.4476;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:27:13.16:128,13,0	1/1:6,1:7:6.02:92,6,0	./.	./.	1/1:21,9:30:36.12:553,36,0	1/1:16,9:24:36.12:552,36,0	1/1:12,3:14:6.02:92,6,0	./.	1/1:9,10:19:18.06:277,18,0	1/1:20,10:30:33.11:506,33,0	1/1:20,12:32:39.13:600,39,0	1/1:5,4:9:15.05:231,15,0	1/1:17,4:20:21.07:323,21,0	1/1:9,4:13:15.05:231,15,0	1/1:15,13:28:24.08:369,24,0	0/1:19,1:20:19.03:19,0,534	1/1:18,11:29:22.64:370,23,0	1/1:16,8:25:27.65:420,28,0	1/1:14,5:19:15.05:231,15,0	1/1:13,16:29:39.13:600,39,0	1/1:11,6:17:24.08:369,24,0	1/1:3,5:8:6.02:92,6,0	1/1:19,12:30:45.07:686,45,0	1/1:9,5:17:15.05:231,15,0	1/1:19,10:29:18.06:277,18,0	1/1:18,0:23:35.92:334,36,0	1/1:19,0:20:18.35:206,18,0	1/1:14,0:16:15.04:176,15,0
chr10	5655597	.	T	TCAG	745.48	PASS	AB=0.828;AC=4;AF=0.071;AN=56;BaseQRankSum=1.694;DP=556;FS=0.000;HRun=0;HaplotypeScore=134.0443;InbreedingCoeff=-0.0812;MQ=54.99;MQ0=26;MQRankSum=-3.184;QD=8.47;ReadPosRankSum=-2.072;VQSLOD=2.8704;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:27,4:29:93.95:94,0,312	0/0:3,0:3:9.01:0,9,107	0/0:28,0:7:19.27:0,19,249	0/0:18,0:5:12.04:0,12,212	0/0:30,0:30:78.63:0,79,1074	0/0:22,0:22:51.05:0,51,562	0/0:13,0:13:29.09:0,29,423	0/0:33,0:30:89.69:0,90,1355	0/0:20,0:20:45.10:0,45,604	0/0:28,0:28:77.77:0,78,1018	0/0:23,0:23:63.10:0,63,749	0/0:9,0:9:27.07:0,27,355	0/0:17,0:17:45.04:0,45,587	0/0:15,0:15:39.04:0,39,523	0/0:22,0:22:51.13:0,51,687	0/0:21,0:21:51.16:0,51,849	0/0:22,0:21:16.88:0,17,428	0/0:22,0:22:42.36:0,42,772	0/0:11,0:9:21.50:0,22,250	0/0:24,0:24:63.14:0,63,806	0/0:19,0:19:57.13:0,57,803	0/0:11,0:11:24.07:0,24,377	0/0:25,0:25:72.14:0,72,902	0/0:15,0:15:29.11:0,29,402	0/0:17,0:17:36.06:0,36,440	0/1:19,3:22:99:306,0,460	0/1:25,4:27:99:257,0,496	0/1:3,3:6:32.94:198,0,33
chr10	5656119	.	C	CAA	4229.59	PASS	AB=0.981;AC=20;AF=0.357;AN=56;BaseQRankSum=-3.045;DP=638;FS=0.778;HRun=10;HaplotypeScore=90.2225;InbreedingCoeff=0.7307;MQ=78.95;MQ0=1;MQRankSum=-0.594;QD=17.19;ReadPosRankSum=-4.741;VQSLOD=2.7127;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:36:95.36:0,95,906	0/0:13,0:13:30.06:0,30,305	0/1:22,0:22:2.55:3,0,249	0/1:16,0:16:18.36:18,0,210	0/0:23,0:24:57.08:0,57,579	0/0:24,0:24:57.09:0,57,580	0/1:11,0:12:2.21:2,0,228	0/0:30,0:31:68.80:0,69,664	1/1:2,15:19:33.07:452,33,0	0/0:25,0:26:65.84:0,66,648	0/0:26,0:26:72.10:0,72,718	0/0:26,0:26:44.96:0,45,457	0/0:26,0:27:59.78:0,60,577	0/0:15,0:17:23.54:0,24,359	1/1:5,17:24:50.57:659,51,0	1/1:5,8:15:29.58:395,30,0	1/1:2,1:15:15.02:159,15,0	0/0:18,0:18:45.06:0,45,450	1/1:2,16:20:55.95:676,56,0	1/1:4,20:26:56.92:684,57,0	0/0:35,0:36:74.80:0,75,730	1/1:3,20:26:56.03:702,56,0	0/0:26,0:26:60.07:0,60,610	0/0:17,1:22:8.85:0,9,429	1/1:4,15:23:40.47:443,40,0	0/0:25,0:25:48.03:0,48,488	0/1:26,0:26:36.69:37,0,483	0/0:13,0:15:23.75:0,24,296
chr10	5656573	.	TC	T	1813.66	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=9.177;DP=748;FS=4.264;HRun=2;HaplotypeScore=108.9626;InbreedingCoeff=0.9899;MQ=89.28;MQ0=0;MQRankSum=-4.443;QD=36.27;ReadPosRankSum=0.328;VQSLOD=3.4194;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,50:50:99:1909,147,0	0/0:8,0:8:24.08:0,24,358	0/0:28,0:28:78.20:0,78,1043	0/0:27,0:27:66.09:0,66,894	0/0:37,0:37:99:0,111,1639	0/0:21,0:21:60.20:0,60,898	0/0:31,0:31:93.31:0,93,1392	0/0:26,0:26:78.25:0,78,1132	0/0:25,0:25:75.24:0,75,1104	0/0:29,0:29:87.28:0,87,1263	0/0:27,0:27:81.24:0,81,1155	0/0:30,0:30:87.29:0,87,1299	0/0:24,0:24:72.24:0,72,1077	0/0:19,0:19:57.19:0,57,854	0/0:26,0:26:78.26:0,78,1168	0/0:31,0:31:93.31:0,93,1385	0/0:39,0:39:99:0,114,1705	0/0:13,0:13:36.12:0,36,540	0/0:13,0:13:39.13:0,39,585	0/0:33,0:32:99:0,99,1444	0/0:45,0:45:99:0,132,1976	0/0:32,0:32:93.30:0,93,1373	0/0:27,0:27:72.23:0,72,1058	0/0:28,0:28:75.25:0,75,1123	0/0:18,0:18:54.14:0,54,750	0/0:28,0:28:84.28:0,84,1257	0/0:27,0:27:81.27:0,81,1213	0/0:6,0:6:18.06:0,18,270
chr10	5658519	.	C	CACTGATTAAGCCAG	84369.03	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-2.858;DP=668;FS=0.000;HRun=0;HaplotypeScore=244.9391;InbreedingCoeff=0.8241;MQ=55.99;MQ0=0;MQRankSum=-3.840;QD=130.00;ReadPosRankSum=1.517;VQSLOD=4.6834;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:21,19:44:99:6465,105,0	1/1:5,3:10:18.06:1100,18,0	0/0:9,0:10:8.89:0,9,137	0/0:8,0:9:2.36:0,2,52	1/1:16,2:21:39.13:1020,39,0	1/1:12,10:25:66.23:3734,66,0	1/1:22,11:40:90.31:5675,90,0	1/1:24,0:24:60.21:2392,60,0	1/1:14,14:33:87.30:5271,87,0	1/1:19,9:28:81.28:4851,81,0	1/1:8,2:12:27.09:1000,27,0	1/1:23,14:43:99:5910,105,0	1/1:13,15:35:80.86:4622,81,0	1/1:24,17:45:99:6929,117,0	1/1:14,18:38:90.31:5477,90,0	1/1:11,14:28:69.24:4341,69,0	1/1:7,6:16:36.12:2274,36,0	1/1:13,4:22:42.14:2527,42,0	1/1:10,5:17:42.12:2082,42,0	1/1:6,2:10:20.56:653,21,0	1/1:18,2:26:42.14:1818,42,0	1/1:16,2:21:45.15:1757,45,0	1/1:7,0:7:15.05:392,15,0	1/1:20,13:33:84.16:4068,84,0	1/1:12,6:21:51.18:2808,51,0	1/1:12,4:20:57.15:2672,57,0	1/1:17,8:25:69.24:3845,69,0	1/1:2,2:4:12.04:688,12,0
chr10	5659918	.	T	TGAA	11715.74	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=16.571;DP=687;FS=1.816;HRun=0;HaplotypeScore=118.2165;InbreedingCoeff=0.9982;MQ=83.64;MQ0=1;MQRankSum=-7.866;QD=47.62;ReadPosRankSum=1.085;VQSLOD=7.0431;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,35:40:99:2116,102,0	0/0:7,0:7:18.06:0,18,282	0/0:34,0:34:69.86:0,70,966	0/0:19,0:19:48.06:0,48,656	0/0:17,0:17:42.13:0,42,634	0/0:15,0:15:32.94:0,33,476	0/0:32,0:32:87.27:0,87,1316	0/0:16,0:16:36.11:0,36,522	1/1:9,25:34:78.21:1634,78,0	0/0:32,0:32:90.29:0,90,1350	0/0:15,0:15:42.14:0,42,656	0/0:27,0:27:78.25:0,78,1192	0/0:22,0:22:54.02:0,54,840	0/0:14,0:14:39.13:0,39,610	1/1:5,24:29:72.12:1422,72,0	1/1:5,18:23:54.12:1073,54,0	0/0:29,0:29:84.21:0,84,1240	0/0:18,0:18:48.15:0,48,719	1/1:13,32:46:93.28:1914,93,0	1/1:4,24:29:78.18:1598,78,0	0/0:33,0:33:90.29:0,90,1385	1/1:8,18:25:56.98:1050,57,0	0/0:20,0:20:54.18:0,54,841	0/0:31,0:31:87.27:0,87,1337	1/1:4,15:19:42.14:909,42,0	0/0:20,0:20:57.19:0,57,891	0/0:32,0:32:87.30:0,87,1359	0/0:8,0:8:24.08:0,24,375
chr10	5662307	.	T	TTGTGTG	9936.18	PASS	AB=0.618;AC=35;AF=0.625;AN=56;BaseQRankSum=-8.814;DP=627;FS=3.139;HRun=0;HaplotypeScore=178.5815;InbreedingCoeff=0.7482;MQ=61.64;MQ0=8;MQRankSum=-1.835;QD=22.43;ReadPosRankSum=-5.317;VQSLOD=3.8153;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:20:11.53:0,12,135	1/1:6,4:10:12.04:335,12,0	0/0:18,0:12:3.01:0,3,59	0/0:34,0:22:5.10:0,5,64	1/1:8,7:19:5.74:158,6,0	1/1:17,12:32:17.41:541,17,0	1/1:29,5:33:33.07:897,33,0	1/1:36,0:36:55.48:762,55,0	0/0:0,0:17:22.12:0,22,220	1/1:9,8:21:42.12:1007,42,0	1/1:7,11:21:24.42:722,24,0	1/1:10,10:19:13.27:394,13,0	1/1:8,10:20:25.17:694,25,0	1/1:11,11:23:17.79:586,18,0	0/0:4,0:20:20.10:0,20,257	0/0:0,0:13:5.56:0,6,160	0/1:16,0:42:45.54:46,0,128	1/1:11,5:17:15.05:484,15,0	0/0:5,0:9:4.56:0,5,46	0/0:7,0:23:13.38:0,13,171	1/1:25,6:33:17.68:323,18,0	0/0:6,0:9:6.02:0,6,84	1/1:13,10:25:33.11:1029,33,0	1/1:15,12:31:9.03:285,9,0	0/0:7,0:20:12.97:0,13,153	1/1:23,0:24:44.74:650,45,0	1/1:15,0:19:44.98:945,45,0	1/1:7,0:10:3.01:79,3,0
chr10	5662430	.	CTATA	C	6665.04	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=15.273;DP=529;FS=0.792;HRun=0;HaplotypeScore=106.4412;InbreedingCoeff=0.9622;MQ=71.31;MQ0=0;MQRankSum=-12.687;QD=48.65;ReadPosRankSum=-0.160;VQSLOD=5.1532;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,16:26:57.10:986,57,0	0/0:9,0:9:24.08:0,24,635	0/0:12,0:12:2.35:0,2,614	0/0:13,0:13:33.76:0,34,608	0/0:24,0:24:72.25:0,72,1929	0/0:29,0:29:84.27:0,84,2195	0/0:24,0:24:69.18:0,69,1704	0/0:24,0:24:66.21:0,66,1670	1/1:2,10:12:33.10:612,33,0	0/0:14,0:14:39.13:0,39,1023	0/0:19,0:19:57.15:0,57,1426	0/0:20,0:20:57.18:0,57,1401	0/0:14,0:14:42.14:0,42,1093	0/0:24,0:24:69.18:0,69,1673	1/1:3,10:13:36.09:671,36,0	1/1:2,11:13:36.12:682,36,0	0/0:29,0:29:87.30:0,87,2336	0/0:24,0:24:66.22:0,66,1719	1/1:4,1:5:11.96:163,12,0	1/1:6,21:27:75.24:1408,75,0	0/0:11,0:11:24.06:0,24,610	1/1:4,20:24:66.22:1249,66,0	0/0:22,0:22:66.21:0,66,1712	0/0:28,0:28:78.25:0,78,2009	1/1:0,17:17:45.15:893,45,0	0/0:24,0:24:72.20:0,72,1948	0/0:16,0:16:48.10:0,48,1057	0/0:12,0:12:36.12:0,36,852
chr10	5662439	.	AT	A	2818.26	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=13.968;DP=524;FS=0.400;HRun=8;HaplotypeScore=86.8747;InbreedingCoeff=0.9734;MQ=72.30;MQ0=0;MQRankSum=-13.243;QD=21.51;ReadPosRankSum=-0.076;VQSLOD=3.6598;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,17:21:13.93:341,14,0	0/0:10,0:10:24.07:0,24,290	0/0:10,0:10:20.89:0,21,211	0/0:17,0:17:33.18:0,33,403	0/0:25,0:25:66.17:0,66,765	0/0:28,0:28:78.24:0,78,939	0/0:21,0:21:57.14:0,57,673	0/0:22,0:22:57.16:0,57,670	1/1:1,10:11:30.04:286,30,0	0/0:16,0:16:42.13:0,42,507	0/0:20,0:20:54.17:0,54,652	0/0:20,0:20:54.17:0,54,651	0/0:15,0:15:42.13:0,42,507	0/0:20,0:20:51.16:0,51,616	1/1:3,11:14:14.09:241,14,0	1/1:1,12:13:33.05:315,33,0	0/0:35,0:35:99:0,99,1163	0/0:26,0:26:78.20:0,78,924	1/1:0,2:2:6.01:58,6,0	1/1:5,21:26:69.08:651,69,0	0/0:7,0:7:21.06:0,21,254	1/1:1,23:24:69.09:655,69,0	0/0:25,0:25:75.18:0,75,877	0/0:26,0:26:57.17:0,57,687	1/1:6,14:20:51.05:474,51,0	0/0:25,0:25:63.19:0,63,761	0/0:16,0:16:48.11:0,48,563	0/0:9,0:9:27.08:0,27,326
chr10	5662858	.	C	CA	5066.03	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-5.887;DP=583;FS=17.894;HRun=6;HaplotypeScore=87.7441;InbreedingCoeff=0.9872;MQ=83.77;MQ0=1;MQRankSum=-2.475;QD=30.89;ReadPosRankSum=1.031;VQSLOD=3.2427;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,35:38:99:1210,99,0	0/0:4,0:4:9.02:0,9,92	0/0:19,1:20:41.92:0,42,397	0/0:28,0:28:48.58:0,49,582	0/0:11,0:11:30.07:0,30,306	0/0:18,0:18:51.09:0,51,513	0/0:28,0:28:69.11:0,69,689	0/0:35,0:35:87.17:0,87,882	1/1:1,13:14:27.04:322,27,0	0/0:28,0:28:72.15:0,72,730	0/0:14,0:14:33.07:0,33,337	0/0:16,0:16:42.09:0,42,428	0/0:21,0:21:54.12:0,54,551	0/0:16,0:16:48.10:0,48,483	1/1:2,21:23:60.16:733,60,0	1/1:3,20:23:60.09:704,60,0	0/0:27,0:27:72.16:0,72,734	0/0:15,0:15:33.07:0,33,337	1/1:1,17:18:48.15:604,48,0	1/1:3,15:18:45.06:530,45,0	0/0:37,0:37:96.18:0,96,970	1/1:0,12:12:30.04:359,30,0	0/0:16,0:16:45.09:0,45,452	0/0:22,0:22:57.09:0,57,571	1/1:1,17:18:48.15:604,48,0	0/0:21,0:21:57.12:0,57,575	0/0:27,0:27:54.11:0,54,550	0/0:12,0:11:15.03:0,15,153
chr10	5662887	.	CGTGTGTGTGTGT	C	1822.95	PASS	AB=0.781;AC=13;AF=0.241;AN=54;BaseQRankSum=4.422;DP=619;FS=0.738;HRun=0;HaplotypeScore=210.2092;InbreedingCoeff=0.5009;MQ=61.70;MQ0=17;MQRankSum=-2.956;QD=10.30;ReadPosRankSum=0.326;VQSLOD=1.8990;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:33,3:34:8.84:272,9,0	0/0:7,0:7:3.01:0,3,136	0/0:36,0:14:1.36:0,1,3	./.	0/0:14,0:17:15.05:0,15,707	0/0:23,0:23:39.09:0,39,1518	0/0:24,0:24:23.96:0,24,805	1/1:33,0:32:3.01:39,3,0	0/0:14,0:18:15.05:0,15,207	0/0:21,0:21:17.41:0,17,549	0/0:13,0:13:6:0,6,121	0/0:22,0:22:36.11:0,36,1563	0/0:20,0:19:23.72:0,24,1067	0/0:22,0:22:24.61:0,25,1182	0/0:15,0:19:15.05:0,15,216	0/1:14,0:20:8.84:366,0,9	0/1:22,5:26:17.56:94,0,18	0/0:9,0:17:6.02:0,6,188	0/0:26,0:26:20.99:0,21,267	1/1:9,0:9:1.55:4,2,0	0/0:35,0:35:22.63:0,23,1069	0/0:8,0:11:15.03:0,15,170	0/0:15,0:15:15.05:0,15,621	0/0:27,0:28:20.73:0,21,892	0/0:12,0:12:12.04:0,12,258	0/1:12,6:19:99:425,0,137	1/1:10,9:20:12.51:367,13,0	1/1:5,6:10:12.03:410,12,0
chr10	5663457	.	CAA	C	6383.63	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=16.085;DP=551;FS=1.170;HRun=3;HaplotypeScore=75.9675;InbreedingCoeff=0.9553;MQ=89.35;MQ0=0;MQRankSum=-3.283;QD=42.00;ReadPosRankSum=4.597;VQSLOD=4.4073;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,22:22:66.22:1011,66,0	0/0:8,0:8:24.08:0,24,464	0/0:18,0:18:54.18:0,54,1004	0/0:23,0:23:68.80:0,69,1183	0/0:13,0:13:39.13:0,39,752	0/0:19,0:19:57.20:0,57,1101	0/0:28,0:28:84.29:0,84,1608	0/0:24,0:24:72.25:0,72,1385	1/1:0,34:34:99:1561,102,0	0/0:17,0:17:48.16:0,48,898	0/0:8,0:8:24.08:0,24,452	0/0:31,0:31:93.32:0,93,1797	0/0:29,0:29:87.30:0,87,1676	0/0:25,0:25:75.26:0,75,1449	1/1:0,37:37:90.31:1378,90,0	1/1:1,23:24:63.21:965,63,0	0/0:42,0:42:99:0,126,2388	0/0:21,0:21:63.22:0,63,1199	1/1:1,15:16:45.15:688,45,0	1/1:0,4:4:9.03:138,9,0	0/0:23,0:22:63.22:0,63,1195	1/1:0,10:10:30.10:459,30,0	0/0:9,0:9:27.05:0,27,477	0/0:28,0:28:84.29:0,84,1604	1/1:1,4:5:12.04:184,12,0	0/0:16,0:16:48.16:0,48,928	0/0:16,0:16:48.16:0,48,928	0/0:1,0:1:3.01:0,3,58
chr10	5665132	.	AT	A	10087.25	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-2.472;DP=542;FS=26.632;HRun=11;HaplotypeScore=59.8937;InbreedingCoeff=0.9016;MQ=77.08;MQ0=0;MQRankSum=-5.046;QD=19.55;ReadPosRankSum=3.748;VQSLOD=3.9983;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,23:25:59.87:487,60,0	1/1:1,6:7:17.98:148,18,0	0/0:14,0:14:15.03:0,15,156	0/0:12,0:12:21.25:0,21,235	1/1:3,30:33:86.88:714,87,0	1/1:2,17:19:44.95:369,45,0	1/1:1,14:15:38.95:320,39,0	1/1:6,27:33:80.88:665,81,0	1/1:2,16:18:41.94:345,42,0	1/1:4,17:21:47.92:394,48,0	1/1:3,12:15:6.96:264,7,0	1/1:2,13:15:29.95:246,30,0	1/1:4,17:21:30.31:373,30,0	1/1:1,16:18:37.95:295,38,0	1/1:2,11:14:32:252,32,0	1/1:3,15:18:41.94:345,42,0	1/1:4,14:18:35.95:296,36,0	1/1:1,13:14:38.95:320,39,0	1/1:1,16:17:47.94:394,48,0	1/1:4,21:25:50.70:403,51,0	1/1:1,12:13:6.97:263,7,0	1/1:0,18:18:50.85:410,51,0	1/1:4,18:22:50.51:418,51,0	1/1:3,20:23:56.92:468,57,0	1/1:1,21:22:50.94:419,51,0	1/1:4,25:29:74.90:616,75,0	1/1:1,23:24:62.92:517,63,0	1/1:4,15:19:41.95:345,42,0
chr10	5665789	.	CCTTCTCCTT	C	8506.52	PASS	AB=0.928;AC=44;AF=0.815;AN=54;BaseQRankSum=-0.358;DP=520;FS=6.229;HRun=0;HaplotypeScore=122.9070;InbreedingCoeff=0.2304;MQ=35.27;MQ0=113;MQRankSum=1.432;QD=17.08;ReadPosRankSum=2.149;VQSLOD=3.4365;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:13:26.26:342,26,0	./.	0/0:11,0:2:6.02:0,6,150	0/0:9,0:4:12.04:0,12,271	1/1:5,15:15:21.07:384,21,0	1/1:27,0:22:55.98:1076,56,0	1/1:14,0:11:3.01:55,3,0	0/1:38,0:35:99:122,0,262	1/1:17,0:10:21.07:396,21,0	1/1:13,0:10:24.08:538,24,0	1/1:4,12:13:12.04:209,12,0	1/1:19,0:17:42.14:880,42,0	1/1:15,0:12:29.99:591,30,0	1/1:21,0:15:8.90:204,9,0	1/1:14,0:12:23.25:402,23,0	1/1:19,0:14:26.11:436,26,0	0/1:26,0:21:99:217,0,126	0/1:23,0:14:31.24:251,0,31	1/1:19,0:13:12.50:179,12,0	1/1:21,0:18:36.54:586,37,0	1/1:11,0:7:9.51:273,10,0	1/1:19,0:12:24.08:435,24,0	0/1:4,13:16:0:0,0,0	1/1:27,0:17:5.82:127,6,0	1/1:10,0:10:14.60:237,15,0	1/1:27,0:22:7.31:268,7,0	0/1:14,0:11:77.96:78,0,111	0/1:28,0:15:13.45:220,0,13
chr10	5665795	.	CCTT	C	5599.09	PASS	AB=0.972;AC=45;AF=0.804;AN=56;BaseQRankSum=-0.012;DP=513;FS=11.467;HRun=0;HaplotypeScore=100.4719;InbreedingCoeff=0.2138;MQ=36.64;MQ0=96;MQRankSum=2.942;QD=11.54;ReadPosRankSum=1.398;VQSLOD=3.3973;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:14:23.19:227,23,0	1/1:2,0:2:3.01:47,3,0	0/0:15,0:3:9.03:0,9,173	0/0:12,0:4:12.04:0,12,232	1/1:19,0:15:21.07:258,21,0	1/1:22,4:23:59.86:781,60,0	1/1:4,10:12:3.01:38,3,0	0/1:31,3:31:99:153,0,296	1/1:17,0:10:20.60:251,21,0	1/1:12,1:11:27.04:355,27,0	1/1:15,0:13:12.02:133,12,0	1/1:16,3:17:42.07:558,42,0	1/1:14,3:14:35.69:457,36,0	1/1:6,16:16:8.98:129,9,0	1/1:13,0:12:24.71:307,25,0	1/1:18,0:14:26.96:307,27,0	0/1:25,0:20:24.63:25,0,185	0/1:22,0:15:18.09:188,0,18	1/1:17,0:11:2.45:101,2,0	1/1:22,0:20:21.75:372,22,0	1/1:12,0:8:9.72:196,10,0	1/1:17,0:10:24.07:282,24,0	0/1:16,1:16:0.02:0,0,0	1/1:12,13:17:6.02:85,6,0	1/1:11,0:11:19.22:238,19,0	0/1:23,0:20:3.34:3,0,55	0/1:14,1:12:78.71:79,0,168	0/1:28,0:15:29.36:29,0,33
chr10	5665796	.	CT	C	121.46	PASS	AB=0.717;AC=10;AF=0.179;AN=56;BaseQRankSum=7.058;DP=513;FS=5.471;HRun=2;HaplotypeScore=109.2251;InbreedingCoeff=0.0419;MQ=36.81;MQ0=94;MQRankSum=1.776;QD=0.84;ReadPosRankSum=4.159;VQSLOD=-0.7074;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:14,8:14:19.73:20,0,49	1/1:2,0:2:0.89:2,1,0	0/0:15,1:3:9.03:0,9,133	0/0:13,0:4:12.04:0,12,179	0/0:19,0:15:15.29:0,15,49	0/0:27,0:24:8.80:0,9,65	0/0:14,0:12:1.84:0,2,6	0/0:34,0:31:36.61:0,37,732	0/1:9,8:10:8:33,0,8	0/0:13,0:11:4.74:0,5,52	0/0:15,0:13:9.63:0,10,42	0/0:19,0:17:7.32:0,7,71	0/0:18,0:15:8.95:0,9,83	0/1:22,0:16:0.79:1,0,3	0/1:6,7:12:25.42:42,0,25	0/1:9,9:14:35.55:36,0,43	0/0:25,0:20:38.12:0,38,387	0/0:21,0:15:17.32:0,17,168	0/0:14,2:11:0.57:0,1,136	0/1:7,15:20:28.79:42,0,29	0/0:9,1:7:0.61:0,1,10	0/1:9,8:10:0.50:31,0,1	0/0:17,0:16:0:0,0,0	0/0:25,0:17:0.82:0,1,3	0/1:7,4:11:21.82:38,0,22	0/0:23,0:20:55.22:0,55,486	0/0:15,0:12:24.67:0,25,342	0/0:28,0:15:32.35:0,32,291
chr10	5665799	.	CTT	C	897.34	PASS	AB=0.840;AC=25;AF=0.446;AN=56;BaseQRankSum=5.980;DP=500;FS=2.874;HRun=2;HaplotypeScore=111.0556;InbreedingCoeff=0.0198;MQ=38.00;MQ0=84;MQRankSum=0.718;QD=3.03;ReadPosRankSum=4.918;VQSLOD=-0.5705;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:15,8:15:33.20:91,0,33	1/1:1,0:1:2.37:8,2,0	0/0:18,1:4:9.03:0,9,183	0/0:14,0:4:12.04:0,12,244	0/0:20,0:16:10.80:0,11,58	0/1:26,0:23:23.87:49,0,24	1/1:13,0:12:2.05:15,2,0	0/0:28,0:25:49.04:0,49,786	1/1:9,8:11:1.27:115,1,0	0/1:12,0:10:18.38:18,0,25	0/0:13,0:12:8.50:0,8,42	0/1:20,0:18:21.51:22,0,109	0/1:15,0:13:18.33:29,0,18	1/1:21,0:16:3.11:13,3,0	0/1:6,7:12:14.19:112,0,14	0/1:10,9:15:34.54:130,0,35	0/0:26,0:21:44.80:0,45,589	0/1:17,1:13:32.59:33,0,103	0/1:14,2:10:20.36:20,0,144	0/1:7,15:20:37.78:134,0,38	1/1:10,0:7:14.44:51,14,0	1/1:8,8:10:23.09:128,23,0	0/0:19,0:17:3.01:0,3,36	1/1:23,0:17:2.22:8,2,0	0/1:7,4:11:9.86:93,0,10	0/0:23,0:20:56.92:0,57,724	0/0:14,0:12:18.42:0,18,463	0/0:25,2:16:20.86:0,21,390
chr10	5666813	.	C	CTT	9667.37	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-14.944;DP=820;FS=3.593;HRun=2;HaplotypeScore=91.8863;InbreedingCoeff=0.9994;MQ=79.48;MQ0=0;MQRankSum=-0.753;QD=46.70;ReadPosRankSum=2.651;VQSLOD=4.8720;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:63,0:63:99:0,187,2651	0/0:9,0:9:24.08:0,24,353	0/0:27,0:28:59.21:0,59,1008	0/0:29,0:29:74.80:0,75,1068	0/0:22,0:22:66.22:0,66,971	0/0:29,0:28:84.25:0,84,1195	0/0:40,0:40:99:0,114,1556	0/0:22,0:22:57.17:0,57,789	1/1:0,32:32:84.29:1572,84,0	0/0:37,0:37:99:0,105,1530	0/0:13,0:13:27.09:0,27,393	0/0:29,0:29:81.24:0,81,1151	0/0:32,0:32:90.25:0,90,1263	0/0:40,0:40:99:0,120,1765	1/1:1,22:24:54.19:1012,54,0	1/1:2,30:32:75.26:1404,75,0	0/0:23,0:23:60.17:0,60,843	0/0:26,0:26:78.24:0,78,1119	1/1:0,22:22:66.21:1184,66,0	1/1:0,31:32:87.21:1557,87,0	0/0:38,0:38:99:0,108,1589	1/1:2,30:32:87.30:1628,87,0	0/0:30,0:30:87.29:0,87,1276	0/0:30,0:30:90.28:0,90,1284	1/1:3,30:33:72.20:1311,72,0	0/0:27,0:27:78.26:0,78,1148	0/0:35,0:35:99:0,102,1493	0/0:11,0:11:33.09:0,33,464
chr10	5667192	.	G	GAAACC	14480.86	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-13.651;DP=790;FS=3.283;HRun=0;HaplotypeScore=134.8753;InbreedingCoeff=0.9996;MQ=67.10;MQ0=0;MQRankSum=-6.187;QD=58.16;ReadPosRankSum=2.132;VQSLOD=5.5694;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,40:54:99:3012,108,0	0/0:15,0:15:33.11:0,33,627	0/0:26,0:24:45.74:0,46,869	0/0:22,0:22:38.50:0,38,638	0/0:21,0:21:54.17:0,54,979	0/0:28,0:28:69.22:0,69,1286	0/0:38,0:38:84.26:0,84,1534	0/0:23,0:23:57.08:0,57,994	1/1:10,14:26:54.19:1579,54,0	0/0:38,0:38:99:0,102,1911	0/0:23,0:23:60.21:0,60,1149	0/0:36,0:36:93.30:0,93,1723	0/0:25,0:25:57.18:0,57,1067	0/0:28,0:28:60.21:0,60,1158	1/1:6,36:42:99:2898,99,0	1/1:6,16:24:48.16:1406,48,0	0/0:25,0:25:63.22:0,63,1204	0/0:23,0:23:51.08:0,51,861	1/1:16,3:18:24.03:559,24,0	1/1:4,19:23:63.22:1835,63,0	0/0:50,0:50:99:0,123,2320	1/1:13,24:37:69.19:1897,69,0	0/0:19,0:19:39.12:0,39,699	0/0:31,0:31:69.24:0,69,1331	1/1:6,17:23:45.15:1294,45,0	0/0:19,0:20:45.13:0,45,732	0/0:37,0:37:87.23:0,87,1536	0/0:13,0:13:36.12:0,36,692
chr10	5667595	.	G	GA	2407.36	PASS	AB=0.929;AC=11;AF=0.196;AN=56;BaseQRankSum=-5.023;DP=583;FS=0.000;HRun=10;HaplotypeScore=69.4654;InbreedingCoeff=0.8940;MQ=69.78;MQ0=1;MQRankSum=-0.887;QD=17.20;ReadPosRankSum=-1.738;VQSLOD=3.5664;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,32:40:61.38:806,61,0	0/0:14,0:14:29.95:0,30,246	0/0:16,0:13:17.90:0,18,185	0/0:27,0:22:6.85:0,7,240	0/0:21,0:21:32.88:0,33,419	0/0:7,0:6:14.97:0,15,123	0/0:23,0:23:53.89:0,54,440	1/1:14,19:33:27.09:516,27,0	0/0:16,0:16:35.93:0,36,296	0/0:23,0:23:65.89:0,66,537	0/0:22,0:22:56.91:0,57,468	0/0:14,0:14:38.94:0,39,317	0/1:12,1:13:2.04:2,0,191	0/0:15,0:15:11.81:0,12,247	0/0:23,0:23:56.92:0,57,468	0/0:22,0:23:55.91:0,56,446	0/0:29,0:32:65.74:0,66,541	0/0:18,0:18:40.10:0,40,324	0/0:24,0:24:62.91:0,63,514	0/0:30,2:33:56.93:0,57,660	0/0:10,0:10:23.96:0,24,197	0/0:23,0:22:62.89:0,63,511	0/0:19,0:19:25.16:0,25,411	0/0:13,0:13:32.71:0,33,270	0/0:25,0:26:57.98:0,58,513	1/1:1,13:14:39.10:415,39,0	1/1:4,17:21:23.48:455,23,0	1/1:2,16:18:17.45:387,17,0
chr10	5667721	.	CTT	C	685.26	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.380;DP=517;FS=0.000;HRun=3;HaplotypeScore=71.9998;InbreedingCoeff=0.9905;MQ=87.20;MQ0=0;MQRankSum=-1.918;QD=36.07;ReadPosRankSum=1.440;VQSLOD=3.1956;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:78.24:0,78,1441	0/0:14,0:14:42.14:0,42,811	0/0:21,0:21:57.19:0,57,1051	0/0:15,0:15:42.04:0,42,696	0/0:32,0:32:93.30:0,93,1734	0/0:18,0:17:51.17:0,51,973	0/0:20,0:20:60.21:0,60,1159	0/0:32,0:32:96.26:0,96,1689	0/0:15,0:15:45.15:0,45,869	0/0:15,0:15:42.14:0,42,781	0/0:21,0:21:63.21:0,63,1174	0/0:15,0:15:45.15:0,45,858	0/0:12,0:12:36.12:0,36,681	0/0:6,0:6:18.06:0,18,348	0/0:12,0:12:36.12:0,36,696	0/0:9,0:9:27.08:0,27,491	1/1:0,19:19:51.17:780,51,0	0/0:19,0:19:51.12:0,51,899	0/0:21,0:21:60.20:0,60,1129	0/0:26,0:26:78.27:0,78,1492	0/0:14,0:14:42.14:0,42,796	0/0:26,0:26:69.23:0,69,1295	0/0:16,0:16:45.10:0,45,800	0/0:21,0:21:63.21:0,63,1177	0/0:22,0:22:66.23:0,66,1275	0/0:21,0:21:60.21:0,60,1121	0/0:15,0:15:45.15:0,45,869	0/0:13,0:13:36.08:0,36,597
chr10	5668527	.	C	CAT	9346.92	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-9.955;DP=674;FS=4.355;HRun=0;HaplotypeScore=76.7862;InbreedingCoeff=0.9999;MQ=91.88;MQ0=3;MQRankSum=-3.465;QD=42.68;ReadPosRankSum=6.115;VQSLOD=6.4292;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,0:41:96.29:1124,96,0	0/0:13,0:13:39.09:0,39,578	0/0:29,0:29:78.23:0,78,1195	0/0:27,0:27:68.45:0,68,882	0/0:23,0:23:69.21:0,69,1068	0/0:20,0:20:60.20:0,60,976	0/0:29,0:29:78.23:0,78,1242	0/0:32,0:32:90.17:0,90,1335	1/1:0,25:24:57.20:1157,57,0	0/0:25,0:25:75.24:0,75,1176	0/0:20,0:20:60.12:0,60,891	0/0:15,0:15:45.14:0,45,706	0/0:25,0:25:75.20:0,75,1144	0/0:20,0:20:57.18:0,57,904	1/1:0,29:29:63.22:1277,63,0	1/1:2,15:16:36.12:731,36,0	0/0:28,0:28:81.21:0,81,1258	0/0:14,0:14:39.13:0,39,635	1/1:0,24:24:72.21:1376,72,0	1/1:1,24:26:54.18:1064,54,0	0/0:18,0:18:51.16:0,51,800	1/1:0,28:28:69.24:1400,69,0	0/0:23,0:23:69.20:0,69,1069	0/0:28,0:28:84.16:0,84,1273	1/1:1,23:28:60.21:1218,60,0	0/0:25,0:25:75.13:0,75,1126	0/0:30,0:30:90.25:0,90,1414	0/0:11,0:11:33.10:0,33,512
chr10	5668800	.	T	TC	9499.40	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-19.697;DP=689;FS=6.195;HRun=0;HaplotypeScore=98.2652;InbreedingCoeff=0.9912;MQ=88.55;MQ0=0;MQRankSum=-7.665;QD=43.58;ReadPosRankSum=0.245;VQSLOD=4.5953;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,45:45:99:1966,123,0	0/0:8,0:8:20.59:0,21,129	0/0:22,0:22:60.17:0,60,780	0/0:28,0:28:73.12:0,73,841	0/0:32,0:32:87.86:0,88,604	0/0:25,0:25:73.97:0,74,494	0/0:21,0:21:62.03:0,62,404	0/0:28,0:28:45.91:0,46,402	1/1:2,16:18:45.15:720,45,0	0/0:22,0:22:40.08:0,40,334	0/0:27,0:27:76.86:0,77,517	0/0:22,0:22:65.01:0,65,426	0/0:16,0:16:47.30:0,47,330	0/0:21,0:21:10.22:0,10,303	1/1:0,32:32:93.32:1487,93,0	1/1:0,28:28:78.27:1247,78,0	0/0:26,0:26:69.07:0,69,457	0/0:24,0:24:22.92:0,23,349	1/1:0,23:23:63.19:962,63,0	1/1:0,26:26:75.26:1199,75,0	0/0:38,0:38:99:0,109,729	1/1:1,26:27:69.24:1103,69,0	0/0:27,0:27:49.16:0,49,479	0/0:20,0:20:59.05:0,59,384	1/1:1,18:19:51.17:815,51,0	0/0:30,0:30:63.34:0,63,484	0/0:20,0:20:59.12:0,59,397	0/0:14,0:14:38.64:0,39,285
chr10	5669170	.	C	CGT	3827.08	PASS	AB=0.691;AC=23;AF=0.460;AN=50;BaseQRankSum=4.901;DP=602;FS=6.311;HRun=0;HaplotypeScore=121.6220;InbreedingCoeff=0.4796;MQ=67.77;MQ0=7;MQRankSum=0.907;QD=12.15;ReadPosRankSum=-0.524;VQSLOD=2.9493;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:27.08:0,27,329	1/1:5,0:5:12.03:143,12,0	0/0:41,0:28:57.10:0,57,652	0/0:29,0:21:20.09:0,20,217	./.	1/1:20,0:20:27.09:427,27,0	1/1:24,4:28:54.14:672,54,0	1/1:23,0:23:5.08:423,5,0	0/0:18,0:18:29.36:0,29,353	1/1:29,0:29:17.41:577,17,0	0/1:9,10:19:30.56:41,0,31	0/1:7,7:14:25.03:39,0,25	1/1:25,0:23:8.75:528,9,0	0/1:6,8:15:12.84:65,0,13	0/0:26,0:23:29.85:0,30,336	0/0:24,0:24:44.97:0,45,519	0/1:22,0:22:99:347,0,128	0/1:6,9:16:0.18:72,0,0	0/0:19,0:19:33.02:0,33,389	0/0:21,0:21:30.01:0,30,352	./.	0/0:16,0:15:17.99:0,18,220	0/1:13,11:24:0:0,0,0	0/1:11,22:33:30.51:43,0,31	0/0:21,0:20:23.97:0,24,292	1/1:28,0:29:39.29:381,39,0	1/1:12,0:12:6.02:68,6,0	./.
chr10	5669183	.	GTGTA	G	3964.64	PASS	AB=0.914;AC=21;AF=0.404;AN=52;BaseQRankSum=1.260;DP=608;FS=3.589;HRun=0;HaplotypeScore=129.4602;InbreedingCoeff=0.4703;MQ=52.04;MQ0=21;MQRankSum=2.007;QD=12.79;ReadPosRankSum=-1.166;VQSLOD=3.1361;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:27.09:0,27,588	1/1:6,0:6:7.66:138,8,0	0/0:34,0:21:56.92:0,57,815	0/0:20,0:12:20.09:0,20,327	0/1:7,11:18:0:0,0,0	1/1:21,0:20:6.05:131,6,0	1/1:30,3:32:40.79:628,41,0	1/1:8,21:27:36.59:694,37,0	0/0:19,0:18:31.04:0,31,676	0/1:30,1:31:99:562,0,345	0/1:19,0:18:3.37:3,0,20	0/0:17,1:17:4.99:0,5,46	0/1:24,2:24:38.07:282,0,38	0/1:18,1:18:24.37:48,0,24	0/0:26,0:23:30.05:0,30,616	0/0:22,0:21:45.11:0,45,969	0/1:24,2:23:13.10:486,0,13	1/1:14,1:14:8.20:82,8,0	0/0:16,0:14:39.04:0,39,674	0/0:23,0:23:29.66:0,30,673	./.	0/0:12,0:11:18.06:0,18,425	0/1:25,0:24:0:0,0,0	0/0:32,1:32:2.77:0,3,13	0/0:23,0:22:24.08:0,24,481	1/1:4,23:25:53.86:806,54,0	1/1:2,13:14:5.85:106,6,0	./.
chr10	5669185	.	GTA	G	1265.05	PASS	AB=0.973;AC=18;AF=0.346;AN=52;BaseQRankSum=4.236;DP=600;FS=20.503;HRun=0;HaplotypeScore=125.6872;InbreedingCoeff=0.0988;MQ=49.51;MQ0=22;MQRankSum=-0.478;QD=3.90;ReadPosRankSum=-3.293;VQSLOD=0.6415;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:12:27.07:0,27,481	0/1:6,0:6:14.49:35,0,14	0/0:33,0:20:50.09:0,50,765	0/1:17,0:10:0.91:1,0,290	0/1:18,0:18:0:0,0,0	0/1:21,0:20:24.99:25,0,98	0/1:30,4:32:43.94:162,0,44	1/1:29,0:27:25.51:307,26,0	0/0:19,0:18:30.57:0,31,542	0/1:27,4:31:99:161,0,255	0/0:19,0:18:2.11:0,2,8	0/1:17,0:16:15.97:17,0,16	0/1:25,1:24:87.55:88,0,126	0/1:20,0:19:11.86:12,0,26	0/0:26,0:23:10.69:0,11,486	0/0:21,0:20:32.71:0,33,761	0/1:24,2:23:12.20:145,0,12	0/1:13,0:12:6.46:31,0,6	0/0:16,0:14:35.79:0,36,565	0/0:20,0:23:29.88:0,30,543	./.	0/0:10,0:10:18.06:0,18,344	0/1:25,0:24:0:0,0,0	0/0:33,0:32:5.96:0,6,44	0/0:22,0:21:24.08:0,24,446	1/1:26,0:24:53.48:398,53,0	1/1:15,0:14:5.74:38,6,0	./.
chr10	5669191	.	GTA	G	1572.99	PASS	AB=0.950;AC=29;AF=0.537;AN=54;BaseQRankSum=5.798;DP=584;FS=3.161;HRun=0;HaplotypeScore=121.2386;InbreedingCoeff=0.7387;MQ=46.67;MQ0=36;MQRankSum=-0.579;QD=4.60;ReadPosRankSum=0.183;VQSLOD=2.5495;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:11:23.98:0,24,255	1/1:6,0:6:10:57,10,0	0/0:26,0:15:14.41:0,14,225	0/0:12,0:5:11.99:0,12,111	0/0:18,0:18:0:0,0,0	1/1:16,0:15:0.26:2,0,0	1/1:32,1:31:37.04:163,37,0	1/1:30,3:30:30.76:299,31,0	0/0:19,0:17:27.31:0,27,328	1/1:30,0:29:25.42:162,25,0	1/1:18,1:17:2.65:37,3,0	1/1:19,0:18:1.36:22,1,0	1/1:26,0:23:30.38:151,30,0	0/1:18,1:18:3.22:6,0,3	0/0:25,0:22:26.88:0,27,286	0/0:20,0:19:42.01:0,42,428	1/1:22,2:21:50.34:391,50,0	1/1:13,0:12:8.76:58,9,0	0/0:12,0:10:26.69:0,27,254	0/0:22,0:21:26.81:0,27,287	1/1:24,0:21:2.98:22,3,0	0/0:11,0:10:17.99:0,18,192	0/0:19,2:20:0:0,0,0	1/1:34,0:30:5.34:41,5,0	0/0:23,0:21:20.97:0,21,181	1/1:28,0:26:39.33:317,39,0	1/1:17,0:16:5.22:32,5,0	./.
chr10	5669602	.	A	AT	4501.59	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-11.522;DP=553;FS=3.929;HRun=8;HaplotypeScore=61.6891;InbreedingCoeff=0.9707;MQ=61.42;MQ0=1;MQRankSum=0.625;QD=26.02;ReadPosRankSum=1.556;VQSLOD=5.7994;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,42:46:99:1261,111,0	0/0:11,0:10:29.98:0,30,263	0/0:11,0:9:3.86:0,4,146	0/0:11,0:6:13.80:0,14,111	0/0:28,0:28:69.03:0,69,630	0/0:23,0:23:63.03:0,63,576	0/0:10,0:10:23.95:0,24,207	0/0:25,0:25:53.95:0,54,482	1/1:0,16:16:45.13:519,45,0	0/0:23,0:23:60:0,60,538	0/0:15,0:15:36:0,36,326	0/0:16,0:16:35.97:0,36,320	0/0:18,0:18:41.98:0,42,374	0/0:14,0:14:36.02:0,36,329	1/1:3,17:20:48.09:538,48,0	1/1:1,13:14:36.11:415,36,0	0/0:32,0:32:51.80:0,52,652	0/0:14,0:14:33.01:0,33,302	1/1:7,13:20:39.06:424,39,0	1/1:2,17:19:45.13:515,45,0	0/0:13,0:12:33.02:0,33,302	1/1:3,13:16:39.12:450,39,0	0/0:21,1:21:60:0,60,540	0/0:28,0:28:80.92:0,81,718	1/1:6,16:22:33.10:379,33,0	0/0:27,0:27:65.52:0,66,585	0/0:16,0:15:39:0,39,352	0/0:22,1:23:62.99:0,63,569
chr10	5670043	.	A	ACC	9847.44	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-15.666;DP=713;FS=0.000;HRun=2;HaplotypeScore=82.4178;InbreedingCoeff=0.9948;MQ=87.38;MQ0=0;MQRankSum=-3.356;QD=50.24;ReadPosRankSum=3.038;VQSLOD=4.6727;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,41:43:99:2373,123,0	0/0:11,0:11:33.11:0,33,505	0/0:20,0:21:47.01:0,47,783	0/0:29,0:29:79.79:0,80,1131	0/0:23,0:23:66.22:0,66,1009	0/0:20,0:20:60.17:0,60,874	0/0:28,0:28:84.24:0,84,1219	0/0:29,0:29:78.24:0,78,1155	1/1:1,14:15:36.12:673,36,0	0/0:29,0:29:78.25:0,78,1158	0/0:24,0:24:66.21:0,66,990	0/0:25,0:25:75.25:0,75,1148	0/0:15,0:15:42.14:0,42,640	0/0:28,0:28:84.20:0,84,1193	1/1:3,22:26:63.14:1142,63,0	1/1:0,24:24:69.24:1333,69,0	0/0:35,0:35:99:0,102,1540	0/0:23,0:23:69.23:0,69,1051	1/1:2,20:24:69.14:1180,69,0	1/1:1,16:17:48.16:925,48,0	0/0:48,0:48:99:0,141,2087	1/1:3,16:19:47.86:888,48,0	0/0:30,0:30:87.30:0,87,1332	0/0:40,0:40:99:0,120,1837	1/1:2,25:28:69.24:1333,69,0	0/0:28,0:28:75.25:0,75,1149	0/0:27,0:27:75.24:0,75,1127	0/0:4,0:4:12.04:0,12,184
chr10	5670198	.	TGA	T	7095.83	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=16.370;DP=691;FS=1.039;HRun=0;HaplotypeScore=95.6728;InbreedingCoeff=0.9997;MQ=88.16;MQ0=1;MQRankSum=0.463;QD=38.78;ReadPosRankSum=2.091;VQSLOD=6.8551;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,43:43:99:1711,120,0	0/0:9,0:9:27.09:0,27,494	0/0:26,0:26:59.60:0,60,1126	0/0:27,0:27:72.08:0,72,1177	0/0:27,0:27:54.17:0,54,953	0/0:21,0:21:57.20:0,57,1027	0/0:28,0:28:78.25:0,78,1378	0/0:41,0:41:99:0,114,1899	1/1:1,19:20:60.20:857,60,0	0/0:27,0:27:81.28:0,81,1480	0/0:12,0:12:33.11:0,33,597	0/0:26,0:26:78.27:0,78,1420	0/0:23,0:23:66.21:0,66,1170	0/0:36,0:36:99:0,108,1965	1/1:1,23:24:69.23:988,69,0	1/1:2,25:27:66.22:945,66,0	0/0:41,0:41:99:0,108,1895	0/0:15,0:15:42.14:0,42,760	1/1:3,15:18:42.11:580,42,0	1/1:0,12:11:33.11:467,33,0	0/0:28,0:28:81.28:0,81,1474	1/1:0,20:20:51.17:730,51,0	0/0:24,0:24:66.23:0,66,1199	0/0:27,0:27:72.23:0,72,1287	1/1:0,19:19:57.19:816,57,0	0/0:24,0:24:72.24:0,72,1292	0/0:35,0:35:99:0,105,1880	0/0:11,0:11:33.11:0,33,604
chr10	5670507	.	GTCTCTC	G	3057.31	PASS	AC=26;AF=0.481;AN=54;BaseQRankSum=3.159;DP=523;FS=9.566;HRun=0;HaplotypeScore=121.1350;InbreedingCoeff=0.8776;MQ=63.18;MQ0=7;MQRankSum=-5.320;QD=15.68;ReadPosRankSum=3.579;VQSLOD=2.1913;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:11:15.05:0,15,368	1/1:2,3:6:12.04:228,12,0	./.	0/0:38,0:12:3.01:0,3,70	1/1:6,9:19:14.96:270,15,0	1/1:12,4:20:24.03:393,24,0	1/1:9,9:19:21.07:414,21,0	0/0:42,0:40:48.16:0,48,1279	0/0:6,0:16:23.61:0,24,645	1/1:10,3:14:13.02:266,13,0	1/1:9,1:11:12.03:189,12,0	1/1:16,2:19:20.94:361,21,0	1/1:9,5:15:9.02:166,9,0	1/1:16,4:20:14.94:259,15,0	0/0:17,0:17:18.05:0,18,458	0/0:13,0:23:21.07:0,21,493	0/0:10,0:14:6.02:0,6,171	1/1:8,2:11:15.05:268,15,0	0/0:20,0:19:18.06:0,18,578	0/0:15,0:20:45.14:0,45,1186	1/1:8,0:8:3.01:62,3,0	0/0:10,0:13:12.04:0,12,325	1/1:14,3:19:15.05:270,15,0	1/1:9,4:13:6.02:124,6,0	0/0:12,0:20:30.10:0,30,840	0/0:25,0:25:45.14:0,45,1133	0/0:22,0:24:45.15:0,45,1116	0/0:11,0:15:15.05:0,15,359
chr10	5670606	.	CCATCCATT	C	6322.92	PASS	AB=0.898;AC=29;AF=0.537;AN=54;BaseQRankSum=-4.881;DP=585;FS=5.208;HRun=0;HaplotypeScore=196.0077;InbreedingCoeff=0.2484;MQ=48.65;MQ0=12;MQRankSum=-4.571;QD=16.55;ReadPosRankSum=0.985;VQSLOD=3.5877;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:15,0:14:14.53:15,0,22	1/1:0,6:6:9.03:244,9,0	0/0:47,0:19:42.52:0,43,797	0/0:47,0:26:33.54:0,34,970	1/1:1,33:34:23.19:463,23,0	1/1:2,25:27:30.10:798,30,0	0/1:3,14:17:35.16:50,0,35	0/1:24,0:22:42.01:42,0,321	0/0:10,0:10:10.13:0,10,131	1/1:3,24:27:69.08:1432,69,0	1/1:0,15:15:2.77:81,3,0	1/1:3,11:14:18.06:446,18,0	1/1:2,24:26:36.12:886,36,0	1/1:1,29:30:35.71:900,36,0	0/0:14,0:14:6.87:0,7,48	0/1:20,0:20:54.62:55,0,196	0/1:16,0:16:22.46:22,0,232	0/1:2,14:16:46.45:390,0,46	0/1:17,0:15:88.89:118,0,89	0/1:27,0:26:7.46:7,0,320	./.	0/0:7,0:7:6.77:0,7,133	1/1:1,9:10:12.50:254,13,0	1/1:3,15:18:3.01:82,3,0	0/0:18,0:18:17.75:0,18,120	0/1:23,0:23:38.79:39,0,1177	0/0:35,0:34:49.10:0,49,1711	0/0:13,0:13:25.88:0,26,619
chr10	5670610	.	CCATT	C	3542.03	PASS	AB=1.000;AC=36;AF=0.667;AN=54;BaseQRankSum=-2.090;DP=575;FS=23.067;HRun=0;HaplotypeScore=180.0853;InbreedingCoeff=0.0673;MQ=47.54;MQ0=15;MQRankSum=-3.083;QD=7.82;ReadPosRankSum=-1.132;VQSLOD=1.4574;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:12,0:13:4.34:30,4,0	1/1:6,0:6:9.03:121,9,0	0/0:44,1:18:47.98:0,48,598	0/0:46,0:26:23.44:0,23,694	1/1:34,0:34:23.09:218,23,0	1/1:26,0:26:30.08:341,30,0	0/1:15,0:16:5.78:31,0,6	0/1:26,0:24:21.28:191,0,21	0/1:10,0:10:18.18:32,0,18	1/1:26,0:26:69.02:744,69,0	1/1:15,0:15:2.83:32,3,0	1/1:14,0:14:18.06:249,18,0	1/1:25,0:25:36.06:405,36,0	1/1:30,0:30:35.82:395,36,0	0/0:12,0:13:1.70:0,2,4	0/1:19,0:19:8.35:44,0,8	0/1:16,0:16:22.84:85,0,23	0/1:16,0:16:2.24:154,0,2	1/1:8,10:14:25.57:172,26,0	0/1:27,0:26:27.76:28,0,55	./.	0/0:7,0:7:3.99:0,4,41	1/1:9,0:9:12.66:117,13,0	1/1:18,0:18:3.01:33,3,0	1/1:15,0:17:2.04:5,2,0	0/1:24,0:24:81.49:81,0,277	0/1:34,0:33:10.10:10,0,343	0/1:13,0:13:23.61:24,0,143
chr10	5670613	.	T	TCCA	1804.41	PASS	AB=0.963;AC=13;AF=0.232;AN=56;BaseQRankSum=-3.664;DP=564;FS=8.909;HRun=0;HaplotypeScore=178.7752;InbreedingCoeff=-0.0018;MQ=47.67;MQ0=15;MQRankSum=8.381;QD=8.55;ReadPosRankSum=3.782;VQSLOD=2.5812;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:11,0:12:7.89:15,0,8	0/0:6,0:6:8.92:0,9,62	0/0:43,0:18:48.12:0,48,708	0/0:44,0:25:71.41:0,71,1018	0/0:33,0:33:24.34:0,24,179	0/0:25,0:25:29.78:0,30,216	0/1:15,0:15:19.29:52,0,19	0/0:28,0:26:39.08:0,39,332	0/1:10,0:10:7.76:32,0,8	0/0:25,0:25:68.33:0,68,476	0/0:15,0:15:2.93:0,3,21	0/0:13,0:13:17.91:0,18,137	0/0:24,0:24:35.83:0,36,283	0/0:29,0:29:35.78:0,36,276	0/1:11,0:12:1.50:2,0,5	0/1:19,0:19:0.67:1,0,75	0/1:17,0:17:44.98:56,0,45	0/0:15,0:15:17.83:0,18,123	0/1:18,0:13:34.56:35,0,77	0/1:27,0:26:28.36:28,0,39	0/0:10,0:10:0:0,0,0	0/1:7,0:7:9.65:26,0,10	0/0:9,0:9:11.95:0,12,95	0/0:16,0:16:2.65:0,3,20	0/0:16,0:18:7.76:0,8,55	0/1:23,3:26:43.84:444,0,44	1/1:22,11:32:14.19:903,14,0	0/1:8,6:14:9.67:357,0,10
chr10	5670614	.	T	TC	500.55	PASS	AB=0.907;AC=7;AF=0.125;AN=56;BaseQRankSum=-1.582;DP=570;FS=2.972;HRun=1;HaplotypeScore=174.4997;InbreedingCoeff=-0.0569;MQ=47.73;MQ0=15;MQRankSum=6.141;QD=3.76;ReadPosRankSum=4.055;VQSLOD=0.5905;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:12,0:11:9.31:9,0,15	0/0:6,0:6:6.11:0,6,19	0/0:42,0:17:45.09:0,45,533	0/0:44,0:25:68.09:0,68,798	0/0:33,0:33:19.38:0,19,91	0/0:25,0:25:22.43:0,22,78	0/0:15,0:15:3.43:0,3,21	0/0:30,0:28:16.22:0,16,316	0/0:10,0:10:17.61:0,18,111	0/0:25,0:25:56.59:0,57,233	0/0:15,0:15:2.04:0,2,6	0/0:13,0:13:14.63:0,15,63	0/0:24,0:24:29.39:0,29,133	0/0:29,0:29:27.92:0,28,120	0/1:13,0:13:11.52:12,0,25	0/0:19,0:19:35.03:0,35,212	0/1:17,0:17:56.09:57,0,56	0/0:15,0:15:13.09:0,13,47	0/0:19,0:14:35.90:0,36,206	0/0:28,0:27:26.73:0,27,162	0/0:10,0:10:0:0,0,0	0/0:7,0:7:1.93:0,2,37	0/0:10,0:10:9.94:0,10,49	0/0:18,0:17:1.71:0,2,6	0/1:18,0:18:1.83:2,0,83	0/1:23,3:26:92.81:124,0,93	0/1:22,11:32:81.60:285,0,82	0/1:8,6:14:29.91:129,0,30
chr10	5672067	.	T	TA	10162.19	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=19.297;DP=697;FS=5.572;HRun=0;HaplotypeScore=95.4225;InbreedingCoeff=0.9996;MQ=75.84;MQ0=0;MQRankSum=-7.931;QD=43.43;ReadPosRankSum=4.056;VQSLOD=4.9703;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,29:29:78.27:1243,78,0	0/0:9,0:9:24.08:0,24,335	0/0:23,0:23:69.23:0,69,965	0/0:27,0:27:78.24:0,78,1050	0/0:26,0:26:65.78:0,66,838	0/0:22,0:22:66.16:0,66,878	0/0:21,0:21:63.17:0,63,828	0/0:31,0:31:84.28:0,84,1169	1/1:1,31:32:84.29:1340,84,0	0/0:28,0:28:72.24:0,72,1007	0/0:19,0:19:51.17:0,51,706	0/0:26,0:26:78.23:0,78,1055	0/0:33,0:33:90.27:0,90,1221	0/0:20,0:20:60.20:0,60,837	1/1:1,39:39:99:1869,117,0	1/1:0,35:35:99:1582,99,0	0/0:24,0:24:72.24:0,72,1007	0/0:21,0:21:63.21:0,63,877	1/1:1,18:20:57.12:805,57,0	1/1:1,26:28:75.26:1189,75,0	0/0:27,0:27:74.56:0,75,995	1/1:0,20:23:54.18:839,54,0	0/0:13,0:13:39.13:0,39,542	0/0:27,0:27:78.26:0,78,1090	1/1:0,27:27:81.28:1294,81,0	0/0:24,0:24:63.16:0,63,850	0/0:29,0:29:87.26:0,87,1178	0/0:13,0:13:39.13:0,39,545
chr10	5673312	.	A	AT	6872.55	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=3.370;DP=816;FS=1.824;HRun=2;HaplotypeScore=80.9704;InbreedingCoeff=1.0000;MQ=77.61;MQ0=0;MQRankSum=-0.549;QD=37.76;ReadPosRankSum=2.131;VQSLOD=5.5321;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:61,0:61:99:0,178,2166	0/0:15,0:15:42.13:0,42,520	0/0:18,0:18:48.14:0,48,577	0/0:15,0:15:39.11:0,39,468	0/0:28,0:28:81.25:0,81,1004	0/0:26,0:26:78.23:0,78,955	0/0:25,0:25:72.23:0,72,893	0/0:40,0:40:99:0,108,1318	1/1:1,23:24:60.20:864,60,0	0/0:28,0:28:78.24:0,78,957	0/0:33,0:33:99:0,99,1227	0/0:33,0:33:96.30:0,96,1190	0/0:29,0:29:81.24:0,81,991	0/0:26,0:26:78.25:0,78,967	1/1:2,30:32:84.28:1209,84,0	1/1:3,21:24:54.18:778,54,0	0/0:32,0:32:90.27:0,90,1103	0/0:31,0:31:93.22:0,93,1117	1/1:2,25:27:75.22:1041,75,0	1/1:1,30:31:90.30:1296,90,0	0/0:26,0:26:75.24:0,75,929	1/1:2,19:21:54.18:777,54,0	0/0:29,0:29:84.26:0,84,1041	0/0:37,0:37:99:0,108,1339	1/1:0,23:23:63.21:907,63,0	0/0:46,0:46:99:0,132,1615	0/0:35,0:35:99:0,102,1263	0/0:21,0:21:56.81:0,57,706
chr10	5675715	.	A	AATCC	900.86	PASS	AB=1.000;AC=17;AF=0.340;AN=50;BaseQRankSum=2.026;DP=568;FS=12.939;HRun=0;HaplotypeScore=129.5055;InbreedingCoeff=0.1218;MQ=69.13;MQ0=12;MQRankSum=-2.777;QD=3.34;ReadPosRankSum=-0.491;VQSLOD=1.9095;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:25:18.06:283,18,0	0/0:7,0:7:5.21:0,5,89	./.	0/1:38,0:23:0:0,0,0	0/0:11,0:11:5.93:0,6,91	0/1:19,0:19:11.89:12,0,200	0/0:29,0:29:8.96:0,9,352	./.	0/1:16,0:16:5.12:5,0,100	0/0:13,0:13:5.99:0,6,67	0/0:11,0:11:2.88:0,3,46	0/1:22,0:23:2.76:3,0,346	0/0:23,0:23:4.09:0,4,238	1/1:13,13:27:21.04:441,21,0	0/1:24,0:24:46.63:47,0,84	./.	0/1:11,0:11:21.91:26,0,22	0/1:13,0:13:15.54:16,0,102	1/1:12,0:9:3:26,3,0	0/1:19,0:19:15.39:83,0,15	0/0:40,0:37:48.06:0,48,633	1/1:21,0:21:8.85:57,9,0	0/0:8,0:8:9:0,9,113	0/0:30,0:30:21.21:0,21,396	0/1:20,0:19:24.05:54,0,24	0/0:21,0:20:5.10:0,5,44	0/0:15,0:15:12.01:0,12,111	0/0:10,0:10:5.81:0,6,34
chr10	5675750	.	CCATCCATCCAT	C	967.22	PASS	AB=0.970;AC=10;AF=0.179;AN=56;BaseQRankSum=7.435;DP=579;FS=1.247;HRun=0;HaplotypeScore=197.2704;InbreedingCoeff=-0.0412;MQ=41.22;MQ0=43;MQRankSum=-3.510;QD=7.62;ReadPosRankSum=2.592;VQSLOD=2.7946;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:16:33.57:0,34,723	0/0:10,0:10:21.04:0,21,558	0/1:33,0:2:12.96:13,0,50	0/0:48,0:6:15.51:0,16,226	0/0:7,0:6:9.03:0,9,399	0/0:19,0:17:38.60:0,39,1108	0/0:45,0:44:99:0,106,2724	0/0:32,0:17:36.52:0,37,348	0/1:13,0:11:72.36:92,0,72	0/0:20,0:19:28.40:0,28,1254	0/0:11,0:11:23.78:0,24,466	0/0:24,0:21:63.08:0,63,2128	0/0:23,0:23:60.20:0,60,1996	0/0:26,0:25:51.17:0,51,1914	0/1:15,0:15:44.08:150,0,44	0/0:9,0:8:17.78:0,18,139	0/1:8,0:7:25.70:26,0,145	0/0:18,0:18:43.93:0,44,1327	0/0:10,0:8:20.78:0,21,195	0/1:12,0:12:54.73:55,0,59	0/0:75,0:69:99:0,114,3583	0/0:13,0:13:14.65:0,15,208	0/0:11,0:11:20.68:0,21,664	0/0:31,0:31:11.12:0,11,2257	0/1:16,0:15:80.55:81,0,169	0/1:14,2:16:99:244,0,136	1/1:2,5:7:4.02:383,4,0	0/1:6,1:7:66.98:67,0,140
chr10	5675754	.	CCATCCAT	C	1420.38	PASS	AB=0.835;AC=9;AF=0.161;AN=56;BaseQRankSum=6.742;DP=583;FS=2.748;HRun=0;HaplotypeScore=166.4962;InbreedingCoeff=-0.0938;MQ=41.88;MQ0=47;MQRankSum=-3.355;QD=13.66;ReadPosRankSum=1.445;VQSLOD=3.1388;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:16:30.09:0,30,577	0/0:11,0:11:21.49:0,21,424	0/0:35,0:3:1.66:0,2,35	0/0:49,0:8:15.04:0,15,173	0/0:8,0:7:12.04:0,12,318	0/0:19,0:16:33.48:0,33,817	0/0:45,0:44:99:0,103,2107	0/0:31,0:16:47.44:0,47,422	0/1:8,5:11:27.74:255,0,28	0/0:21,0:19:53.56:0,54,999	0/0:11,0:11:24.01:0,24,395	0/0:26,0:23:66.96:0,67,1625	0/0:22,0:22:60.20:0,60,1484	0/0:26,0:25:51.17:0,51,1304	0/1:7,8:15:10.45:386,0,10	0/0:8,0:7:11.63:0,12,78	0/1:5,2:6:95.98:96,0,109	0/0:17,0:17:42.11:0,42,959	0/0:12,0:9:10.04:0,10,157	0/1:10,1:11:36.78:169,0,37	0/0:74,0:68:99:0,108,2650	0/1:8,5:13:45.35:45,0,76	0/0:13,0:13:23.82:0,24,587	0/0:31,0:31:25.99:0,26,1636	0/1:10,6:15:52.70:248,0,53	0/1:15,0:15:93.10:93,0,250	0/1:7,0:7:0.80:233,0,1	0/1:7,0:7:34.32:34,0,190
chr10	5675797	.	TCCAC	T	2039.52	PASS	AB=0.804;AC=29;AF=0.558;AN=52;BaseQRankSum=9.939;DP=455;FS=23.582;HRun=0;HaplotypeScore=128.7866;InbreedingCoeff=0.0123;MQ=45.64;MQ0=14;MQRankSum=-9.649;QD=6.75;ReadPosRankSum=0.341;VQSLOD=0.8665;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:4,1:5:5.29:47,0,5	0/0:4,0:4:9.03:0,9,244	0/0:37,1:15:41.12:0,41,742	0/1:38,5:23:99:162,0,619	0/0:6,1:7:12.51:0,13,225	0/1:15,8:17:17.35:17,0,781	0/1:27,10:36:99:102,0,1563	1/1:1,4:5:11.96:138,12,0	1/1:3,2:5:11.79:135,12,0	0/1:15,5:19:99:182,0,638	0/1:16,3:19:33.06:33,0,566	0/1:20,12:26:99:321,0,1014	0/1:17,4:20:99:174,0,885	0/1:22,4:23:93.78:94,0,972	1/1:4,1:5:8.85:89,9,0	1/1:0,4:4:9.03:147,9,0	0/0:4,1:5:2.94:0,3,18	0/1:12,3:16:99:232,0,702	1/1:4,1:5:5.97:45,6,0	1/1:0,2:2:2.96:19,3,0	0/0:57,25:79:30.05:0,30,2605	1/1:0,1:1:2.94:18,3,0	0/0:12,0:12:18.60:0,19,309	0/1:14,12:24:99:105,0,778	./.	1/1:1,2:3:5.98:75,6,0	1/1:4,0:4:11.79:74,12,0	./.
chr10	5675836	.	ACCCT	A	195.96	PASS	AB=0.917;AC=9;AF=0.180;AN=50;BaseQRankSum=5.959;DP=446;FS=12.864;HRun=0;HaplotypeScore=124.5457;InbreedingCoeff=0.1624;MQ=38.01;MQ0=48;MQRankSum=-3.510;QD=3.06;ReadPosRankSum=-3.074;VQSLOD=1.0085;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:10,0:5:2.02:42,0,2	0/0:6,0:7:10.24:0,10,118	0/0:38,0:5:15:0,15,194	0/0:50,0:15:13.51:0,14,276	0/0:13,0:13:21.94:0,22,274	0/0:22,0:18:33.53:0,34,452	0/0:26,0:26:67.89:0,68,869	0/1:8,8:10:44.97:168,0,45	0/1:7,0:5:9.49:9,0,12	0/1:16,0:13:8.34:8,0,280	0/0:14,0:13:15.71:0,16,237	0/0:35,0:28:44.13:0,44,983	0/0:18,0:17:26.43:0,26,488	0/0:27,0:22:40.88:0,41,700	0/0:1,0:1:3.01:0,3,30	1/1:3,0:3:5.95:54,6,0	0/0:6,0:5:3.01:0,3,7	0/1:10,0:11:31.83:32,0,321	0/0:5,0:1:2.60:0,3,10	./.	0/0:75,0:69:99:0,110,1741	./.	0/0:15,0:14:16.95:0,17,148	0/0:23,0:21:4.34:0,4,573	1/1:1,0:1:0.47:1,0,0	0/0:3,0:2:3.01:0,3,49	0/0:1,0:1:3.01:0,3,33	./.
chr10	5675949	.	TCCTC	T	173.29	PASS	AB=0.829;AC=4;AF=0.071;AN=56;BaseQRankSum=6.272;DP=858;FS=1.261;HRun=0;HaplotypeScore=246.5729;InbreedingCoeff=-0.0872;MQ=46.94;MQ0=37;MQRankSum=-3.099;QD=2.94;ReadPosRankSum=-5.593;VQSLOD=0.9246;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:21,4:25:98.30:98,0,472	0/0:8,0:8:14.75:0,15,160	0/0:64,0:27:48.48:0,48,754	0/0:71,0:31:15.09:0,15,775	0/0:23,0:22:39.13:0,39,606	0/0:25,0:19:29.79:0,30,403	0/0:51,0:50:71.88:0,72,1268	0/0:20,0:20:57.19:0,57,940	0/0:22,0:21:32.78:0,33,650	0/0:38,0:35:78.64:0,79,1217	0/0:14,0:13:12.04:0,12,198	0/0:54,0:48:48.86:0,49,1187	0/0:39,0:38:65.24:0,65,880	0/0:39,0:34:69.42:0,69,987	0/0:27,0:27:50.98:0,51,904	0/0:20,0:19:21.06:0,21,471	0/1:4,3:7:46.92:106,0,47	0/0:32,0:31:19.68:0,20,776	0/0:20,0:16:32.70:0,33,483	0/0:10,0:9:23.93:0,24,311	0/0:100,0:91:79.69:0,80,1413	0/0:27,0:26:3.13:0,3,560	0/0:28,0:27:41.39:0,41,625	0/0:33,0:29:38.91:0,39,488	0/0:14,0:14:27.25:0,27,403	0/0:19,0:19:15.71:0,16,601	0/1:16,3:17:21.01:21,0,556	0/1:7,1:8:57.16:57,0,294
chr10	5675953	.	CCCATCCAT	C	1527.04	PASS	AB=0.881;AC=18;AF=0.375;AN=48;BaseQRankSum=-6.459;DP=842;FS=6.085;HRun=0;HaplotypeScore=281.7631;InbreedingCoeff=0.2103;MQ=46.13;MQ0=40;MQRankSum=0.120;QD=3.28;ReadPosRankSum=0.877;VQSLOD=1.7940;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:25:15.28:15,0,152	./.	./.	./.	1/1:16,5:20:0.47:1,0,0	1/1:24,0:18:0.18:69,0,0	1/1:48,0:46:0.57:32,1,0	0/0:25,0:23:1.77:0,2,4	0/0:24,0:22:19.19:0,19,233	1/1:26,11:34:24.07:452,24,0	0/1:8,6:12:0:0,0,0	0/1:52,2:47:99:501,0,148	0/1:31,6:36:30.62:118,0,31	0/1:38,2:35:21.61:234,0,22	0/0:27,0:27:25.22:0,25,331	0/0:22,0:21:22.49:0,22,257	0/0:8,0:8:18.61:0,19,211	0/1:26,8:33:28.60:67,0,29	0/0:18,0:14:2.60:0,3,10	0/0:10,0:9:2.94:0,3,18	1/1:99,0:90:2.84:138,3,0	0/0:26,0:25:22.86:0,23,180	./.	1/1:24,0:29:2.23:36,2,0	0/0:14,0:14:1.25:0,1,3	0/0:19,0:18:8.59:0,9,61	0/0:18,0:16:14.88:0,15,250	0/0:8,0:8:11.64:0,12,178
chr10	5677421	.	A	ACATTCATTCATT	32087.54	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=0.507;DP=653;FS=0.000;HRun=0;HaplotypeScore=197.6872;InbreedingCoeff=0.8156;MQ=50.21;MQ0=5;MQRankSum=-3.636;QD=53.39;ReadPosRankSum=0.018;VQSLOD=4.4161;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:26:21.07:923,21,0	1/1:11,3:15:27.09:1225,27,0	0/0:11,0:6:3.01:0,3,87	0/0:20,0:9:6.01:0,6,98	1/1:26,9:38:63.10:2234,63,0	1/1:12,8:21:36.12:1949,36,0	1/1:17,3:22:18.06:794,18,0	1/1:37,0:36:39.13:1552,39,0	1/1:11,0:22:27.09:670,27,0	1/1:23,7:34:57.18:2505,57,0	1/1:12,9:21:33.07:1538,33,0	1/1:18,9:31:36.12:2063,36,0	1/1:8,6:14:21.07:1028,21,0	1/1:14,5:22:33.11:1654,33,0	1/1:16,0:22:21.07:523,21,0	1/1:8,0:17:21.07:528,21,0	0/0:21,0:21:21.03:0,21,566	1/1:11,4:16:18.06:852,18,0	1/1:14,0:16:13.29:322,13,0	1/1:11,0:26:63.10:1355,63,0	1/1:9,0:9:6.02:133,6,0	1/1:14,0:28:43.03:978,43,0	1/1:26,8:38:39.13:1585,39,0	1/1:12,6:21:8.99:369,9,0	1/1:7,0:15:24.08:591,24,0	1/1:27,9:40:54.19:2542,54,0	1/1:22,9:34:51.18:2610,51,0	1/1:5,8:13:27.09:1565,27,0
chr10	5678462	.	TC	T	694.90	PASS	AB=0.969;AC=4;AF=0.077;AN=52;BaseQRankSum=7.186;DP=359;FS=1.709;HRun=5;HaplotypeScore=54.2378;InbreedingCoeff=0.4748;MQ=74.20;MQ0=1;MQRankSum=1.257;QD=12.87;ReadPosRankSum=1.535;VQSLOD=1.7570;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,105,1406	./.	0/1:14,0:13:15.14:15,0,267	0/1:14,1:14:6.35:6,0,159	0/0:8,0:8:18.04:0,18,246	0/0:11,0:11:21.07:0,21,287	0/0:20,0:20:57.18:0,57,761	0/0:13,0:13:39.12:0,39,511	0/0:15,0:15:43.96:0,44,575	0/0:13,0:13:30.10:0,30,406	0/0:6,0:6:18.03:0,18,226	0/0:17,0:17:51.16:0,51,681	0/0:12,0:12:36.10:0,36,473	0/0:10,0:10:30.07:0,30,369	0/0:11,0:11:33.10:0,33,435	0/0:11,0:11:33.09:0,33,434	1/1:0,25:25:69.20:782,69,0	0/0:20,0:20:54.16:0,54,712	0/0:6,0:6:18.06:0,18,244	0/0:11,0:11:27.08:0,27,356	0/0:21,0:21:57.19:0,57,780	0/0:10,0:10:27.09:0,27,367	0/0:10,0:10:30.10:0,30,409	0/0:19,0:19:57.19:0,57,776	0/0:5,0:5:15.05:0,15,203	0/0:7,0:7:18.06:0,18,246	0/0:12,0:12:33.11:0,33,449	./.
chr10	5679024	.	GAGA	G	1391.15	PASS	AB=0.723;AC=18;AF=0.409;AN=44;BaseQRankSum=4.000;DP=527;FS=0.000;HRun=0;HaplotypeScore=23.4921;InbreedingCoeff=0.2960;MQ=22.50;MQ0=253;MQRankSum=-3.143;QD=6.99;ReadPosRankSum=3.414;VQSLOD=1.4404;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	0/0:19,0:2:3.01:0,3,66	0/0:17,0:4:5.94:0,6,43	0/0:29,0:2:5.92:0,6,39	1/1:9,3:4:5.99:69,6,0	1/1:9,12:8:12.04:193,12,0	0/0:15,0:1:3.01:0,3,66	./.	0/0:24,0:5:3.01:0,3,66	0/0:20,0:6:11.97:0,12,176	0/0:23,0:10:6.01:0,6,91	1/1:15,13:13:9.03:144,9,0	0/1:10,7:8:53.92:132,0,54	0/1:7,14:8:54.01:132,0,54	0/0:34,0:11:20.89:0,21,251	1/1:8,3:2:6.02:96,6,0	1/1:8,2:4:3.01:48,3,0	0/0:30,0:8:8.97:0,9,112	1/1:15,6:8:3.01:48,3,0	0/0:12,0:2:3:0,3,28	0/0:40,0:10:19.31:0,19,398	./.	0/1:15,6:9:42.08:267,0,42	0/1:25,8:14:35.48:314,0,35	1/1:2,2:4:6.02:96,6,0
chr10	5681145	.	TCTTCAGGAACTCGCAG	T	14077.10	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=14.611;DP=533;FS=16.126;HRun=0;HaplotypeScore=241.8766;InbreedingCoeff=0.9900;MQ=85.59;MQ0=0;MQRankSum=-14.728;QD=77.77;ReadPosRankSum=6.459;VQSLOD=3.1608;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,120,7679	0/0:11,0:11:30.10:0,30,2243	0/0:30,0:30:66.23:0,66,3751	0/0:16,0:16:39.09:0,39,1692	0/0:21,0:21:60.21:0,60,4314	0/0:20,0:20:57.20:0,57,3888	0/0:20,0:20:54.18:0,54,3529	1/1:7,5:12:12.04:477,12,0	1/1:1,13:14:24.08:1101,24,0	0/0:17,0:17:41.73:0,42,3049	0/0:16,0:16:42.14:0,42,3043	0/0:17,0:17:45.15:0,45,3344	0/0:21,0:21:63.22:0,63,4668	0/0:19,0:19:57.18:0,57,4019	1/1:3,12:15:30.10:1376,30,0	1/1:2,8:10:21.07:964,21,0	1/1:10,18:28:36.12:1652,36,0	0/0:17,0:17:51.18:0,51,3744	1/1:1,7:8:21.07:905,21,0	1/1:2,13:15:21.07:959,21,0	0/0:38,0:38:99:0,102,6965	1/1:6,16:22:27.09:1240,27,0	0/0:20,0:20:57.20:0,57,3960	0/0:29,0:29:84.27:0,84,5040	1/1:3,17:20:36.12:1653,36,0	1/1:5,6:11:18.06:750,18,0	1/1:1,19:20:51.18:2311,51,0	1/1:0,6:6:15.05:689,15,0
chr10	5681183	.	CG	C	1308.31	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.505;DP=546;FS=0.608;HRun=4;HaplotypeScore=127.6942;InbreedingCoeff=0.9814;MQ=78.14;MQ0=1;MQRankSum=-0.348;QD=32.71;ReadPosRankSum=0.706;VQSLOD=2.1977;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,40:40:99:1403,117,0	0/0:12,0:12:33.10:0,33,445	0/0:23,1:24:62.66:0,63,876	0/0:14,0:13:33.10:0,33,430	0/0:18,0:18:51.16:0,51,695	0/0:16,0:16:45.15:0,45,630	0/0:17,0:17:51.14:0,51,679	0/0:20,0:20:45.15:0,45,622	0/0:14,0:14:24.08:0,24,335	0/0:19,0:19:51.02:0,51,700	0/0:14,0:14:42.13:0,42,570	0/0:18,0:18:54.18:0,54,755	0/0:27,0:27:81.24:0,81,1096	0/0:19,0:19:57.16:0,57,778	0/0:21,0:21:51.13:0,51,687	0/0:12,0:12:30.02:0,30,376	0/0:26,0:26:72.13:0,72,941	0/0:16,0:16:48.16:0,48,672	0/0:16,0:15:42.14:0,42,587	0/0:20,0:20:51.17:0,51,711	0/0:28,0:28:81.25:0,81,1115	0/0:24,0:24:51.17:0,51,706	0/0:21,0:21:63.20:0,63,864	0/0:23,0:23:66.22:0,66,924	0/0:21,0:21:48.16:0,48,669	0/0:17,0:17:51.17:0,51,712	0/0:22,0:22:57.19:0,57,795	0/0:7,0:7:15.05:0,15,210
chr10	5682510	.	AATTT	A	1065.56	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=7.611;DP=526;FS=2.846;HRun=0;HaplotypeScore=81.5109;InbreedingCoeff=0.6329;MQ=67.99;MQ0=0;MQRankSum=-0.869;QD=32.29;ReadPosRankSum=1.425;VQSLOD=3.4325;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,26:28:63.21:1155,63,0	0/0:12,0:12:36.12:0,36,942	0/0:6,0:6:11.39:0,11,253	0/1:5,0:5:15.71:16,0,32	0/0:28,0:28:84.29:0,84,2240	0/0:26,0:26:78.27:0,78,2050	0/0:13,0:13:39.13:0,39,1040	0/0:37,0:37:99:0,102,2554	0/0:9,0:9:24.08:0,24,640	0/0:28,0:28:81.23:0,81,2076	0/0:19,0:19:57.20:0,57,1486	0/0:13,0:13:39.13:0,39,1012	0/0:17,0:17:51.18:0,51,1351	0/0:23,0:23:66.23:0,66,1691	0/0:20,0:20:60.21:0,60,1569	0/0:26,0:26:75.26:0,75,1964	0/0:26,0:26:72.25:0,72,1851	0/0:16,0:16:48.15:0,48,1183	0/0:18,0:18:54.19:0,54,1374	0/0:15,0:15:45.15:0,45,1133	0/0:13,0:13:39.13:0,39,1038	0/0:8,0:8:18.06:0,18,474	0/0:9,0:9:27.08:0,27,665	0/0:10,0:10:30.10:0,30,794	0/0:36,0:36:99:0,102,2548	0/0:31,0:31:90.29:0,90,2265	0/0:19,0:19:57.18:0,57,1429	0/0:15,0:15:45.15:0,45,1200
chr10	5683048	.	C	CA	138.54	PASS	AC=2;AF=0.050;AN=40;BaseQRankSum=3.738;DP=318;FS=21.871;HRun=1;HaplotypeScore=42.5862;InbreedingCoeff=0.5060;MQ=50.54;MQ0=29;MQRankSum=-3.583;QD=17.32;ReadPosRankSum=-1.259;VQSLOD=2.0774;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:35:87.24:0,87,1096	0/0:8,0:7:21.07:0,21,272	0/0:8,0:1:3.01:0,3,39	0/0:4,0:3:9.01:0,9,91	0/0:22,1:20:9.31:0,9,617	0/0:12,0:12:30.10:0,30,389	0/0:27,0:25:69.20:0,69,866	1/1:3,5:6:15.05:224,15,0	0/0:1,0:1:3.01:0,3,39	0/0:23,0:22:63.20:0,63,805	0/0:13,0:13:33.10:0,33,415	0/0:15,0:15:39.08:0,39,487	0/0:18,0:18:51.15:0,51,647	0/0:19,0:19:57.19:0,57,740	./.	./.	0/0:5,0:1:3.01:0,3,39	0/0:30,0:28:66.20:0,66,844	./.	./.	0/0:24,0:23:63.14:0,63,784	./.	0/0:17,1:17:45.15:0,45,584	0/0:15,0:13:33.11:0,33,428	./.	0/0:3,0:1:3.01:0,3,39	./.	./.
chr10	5683728	.	G	GC	227.14	PASS	AB=0.950;AC=13;AF=0.271;AN=48;BaseQRankSum=6.428;DP=697;FS=3.472;HRun=0;HaplotypeScore=94.6513;InbreedingCoeff=0.3558;MQ=42.92;MQ0=110;MQRankSum=-4.643;QD=1.62;ReadPosRankSum=-1.773;VQSLOD=1.7849;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:4,3:3:3.01:45,3,0	0/0:6,0:6:3:0,3,42	0/0:37,1:7:9.16:0,9,100	0/1:73,0:16:10.17:10,0,245	0/0:16,0:12:27.07:0,27,357	0/0:12,0:11:17.80:0,18,251	0/0:59,0:55:95.78:0,96,1296	./.	1/1:10,4:9:6.63:79,7,0	0/0:16,0:8:18.06:0,18,251	0/0:4,0:4:3.01:0,3,42	0/0:39,0:30:66.83:0,67,861	0/0:17,0:17:35.94:0,36,452	0/0:31,0:24:42.80:0,43,586	./.	1/1:6,1:5:6.02:80,6,0	0/0:11,1:8:11.25:0,11,129	0/1:17,1:16:48.25:48,0,417	0/1:8,1:4:50.54:51,0,53	1/1:4,0:3:0.47:1,0,0	0/0:163,5:128:99:0,255,3562	./.	0/0:9,0:6:9.03:0,9,122	0/0:89,1:84:99:0,133,1884	0/0:11,2:9:2.99:0,3,23	0/0:10,1:2:1.91:0,2,40	1/1:4,2:4:3.01:48,3,0	./.
chr10	5683781	.	G	GC	43.51	PASS	AB=0.876;AC=7;AF=0.146;AN=48;BaseQRankSum=5.598;DP=615;FS=1.114;HRun=0;HaplotypeScore=85.5986;InbreedingCoeff=0.0392;MQ=48.30;MQ0=76;MQRankSum=-0.867;QD=0.46;ReadPosRankSum=-5.558;VQSLOD=0.3176;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	0/0:6,0:5:5.49:0,5,73	0/1:39,0:5:10.01:10,0,87	0/0:68,0:13:18.38:0,18,209	0/0:13,1:12:15.05:0,15,210	0/0:16,0:10:8.64:0,9,125	0/0:52,7:52:79.80:0,80,1105	0/0:7,0:2:6.02:0,6,77	0/0:8,1:3:2.99:0,3,24	0/0:27,0:19:47.65:0,48,690	0/0:9,1:8:4.72:0,5,71	0/0:30,1:27:20.83:0,21,278	0/1:17,3:18:99:109,0,340	0/0:36,0:29:35.97:0,36,501	./.	0/0:3,0:3:2.75:0,3,37	0/1:4,3:4:4.13:4,0,26	0/1:12,2:12:11.80:12,0,382	0/0:7,0:1:3.01:0,3,42	./.	0/0:99,7:83:72.86:0,73,1468	1/1:5,0:5:1.82:5,2,0	0/0:12,0:11:15.05:0,15,210	0/0:71,6:68:82.88:0,83,1152	0/1:7,0:6:0:0,0,0	0/0:11,0:8:8.52:0,9,144	0/0:6,0:4:3.01:0,3,42	./.
chr10	5683816	.	C	CTG	1871.62	PASS	AB=0.979;AC=27;AF=0.563;AN=48;BaseQRankSum=2.609;DP=543;FS=12.374;HRun=0;HaplotypeScore=63.5753;InbreedingCoeff=-0.0508;MQ=32.60;MQ0=86;MQRankSum=2.265;QD=4.87;ReadPosRankSum=-1.484;VQSLOD=0.6997;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:9:1.25:0,1,3	./.	0/0:44,0:2:2.52:0,3,37	0/0:69,0:9:17.80:0,18,213	0/0:7,0:6:3.01:0,3,39	1/1:9,0:7:6:52,6,0	1/1:50,0:36:42.15:451,42,0	0/1:9,0:3:0.84:1,0,39	1/1:14,0:7:4.59:15,5,0	0/1:15,1:7:96.64:118,0,97	1/1:3,0:3:3:29,3,0	0/1:23,2:22:5.08:284,0,5	0/1:15,0:14:56.91:167,0,57	0/1:25,1:23:51.03:174,0,51	./.	1/1:7,0:6:3:30,3,0	0/1:8,0:5:5.01:5,0,38	1/1:12,0:10:13.46:160,13,0	0/0:13,0:2:6.01:0,6,70	0/1:13,0:11:15.45:15,0,115	1/1:77,4:54:15.89:285,16,0	0/1:10,0:9:29.84:36,0,30	./.	0/1:42,3:41:6.87:94,0,7	1/1:13,0:9:6.01:59,6,0	0/1:19,0:9:30.15:30,0,143	0/1:7,0:5:11.08:11,0,33	./.
chr10	5683836	.	GTGC	G	158.92	PASS	AB=0.938;AC=13;AF=0.250;AN=52;BaseQRankSum=0.657;DP=580;FS=6.944;HRun=0;HaplotypeScore=99.7635;InbreedingCoeff=-0.0401;MQ=44.54;MQ0=60;MQRankSum=1.143;QD=1.10;ReadPosRankSum=2.655;VQSLOD=1.2077;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:8:4.26:0,4,47	0/0:1,0:1:3.01:0,3,44	0/1:44,1:2:0:0,0,0	0/0:58,0:17:13.45:0,13,275	0/0:8,0:7:3.01:0,3,44	0/1:14,1:13:1.53:2,0,142	0/0:54,2:45:27.94:0,28,954	0/1:8,0:4:41.31:41,0,96	0/0:8,3:7:5.91:0,6,44	0/0:10,0:7:4.21:0,4,191	0/0:5,0:4:3.36:0,3,84	0/0:29,1:27:47.18:0,47,838	0/0:20,0:19:15.22:0,15,521	0/0:35,0:34:27.40:0,27,829	./.	0/1:7,0:6:21.64:22,0,61	0/1:5,3:7:24.43:130,0,24	0/1:14,0:13:1.82:2,0,428	0/0:12,0:3:6.02:0,6,85	0/1:8,1:8:15.51:16,0,79	0/0:105,2:80:54.23:0,54,1519	1/1:8,1:8:2.22:7,2,0	0/0:6,0:6:6.02:0,6,111	0/0:54,0:48:47.92:0,48,811	0/1:8,1:7:34.74:35,0,57	0/1:14,0:9:17.65:18,0,144	1/1:6,0:4:2.84:14,3,0	./.
chr10	5683844	.	G	GC	58.64	PASS	AB=0.984;AC=12;AF=0.231;AN=52;BaseQRankSum=1.535;DP=602;FS=18.595;HRun=0;HaplotypeScore=99.1505;InbreedingCoeff=-0.0257;MQ=44.82;MQ0=67;MQRankSum=2.965;QD=0.60;ReadPosRankSum=-1.387;VQSLOD=0.2769;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:12,1:8:4.26:0,4,45	0/0:2,0:2:6.02:0,6,83	0/0:37,0:1:0:0,0,0	0/0:48,0:14:29.58:0,30,319	0/0:7,0:6:3.01:0,3,42	0/0:17,0:13:0.27:0,0,115	0/0:58,3:50:5.86:0,6,902	0/0:10,0:4:12.03:0,12,154	0/1:10,1:7:4.92:5,0,27	0/1:8,0:5:24.38:24,0,153	0/1:6,0:4:5.10:5,0,75	0/0:35,0:32:61.01:0,61,847	0/1:19,1:18:4.39:4,0,430	0/0:39,0:38:7.03:0,7,681	./.	0/1:8,0:7:25.13:25,0,37	0/0:10,2:9:14.64:0,15,96	0/0:16,0:14:39.10:0,39,505	0/0:11,0:3:9.03:0,9,125	0/1:7,0:7:18.50:19,0,75	0/0:126,1:98:78.36:0,78,1670	1/1:8,0:5:3.01:30,3,0	0/0:6,0:6:5.71:0,6,84	0/0:57,0:47:53.58:0,54,750	0/1:7,0:6:33.04:36,0,33	0/1:16,0:8:23.41:23,0,115	1/1:6,0:3:2.92:17,3,0	./.
chr10	5683924	.	GTGTGC	G	1547.98	PASS	AB=0.969;AC=24;AF=0.571;AN=42;BaseQRankSum=-3.038;DP=723;FS=6.959;HRun=0;HaplotypeScore=86.8559;InbreedingCoeff=0.1989;MQ=40.18;MQ0=119;MQRankSum=3.038;QD=3.23;ReadPosRankSum=1.152;VQSLOD=0.7547;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	1/1:5,1:6:3.01:56,3,0	0/0:61,0:5:3.01:0,3,58	0/0:72,0:7:3.90:0,4,49	./.	1/1:7,6:11:1.72:4,2,0	1/1:23,24:41:2.66:56,3,0	./.	1/1:16,0:10:8.38:54,8,0	0/1:18,0:7:49.41:49,0,59	./.	1/1:20,20:28:12.04:224,12,0	1/1:9,13:20:9.02:168,9,0	1/1:23,3:19:8.70:121,9,0	0/1:10,0:7:12.73:25,0,13	0/1:13,0:10:44.73:58,0,45	0/0:16,0:11:11.89:0,12,116	0/1:18,3:18:52.46:236,0,52	0/0:13,0:2:2.98:0,3,21	0/0:8,0:6:0:0,0,0	1/1:85,70:135:5.97:112,6,0	./.	./.	1/1:61,12:57:29.96:507,30,0	0/0:13,0:8:0.02:0,0,45	0/0:19,0:9:1.34:0,1,76	./.	1/1:7,0:3:2.50:9,2,0
chr10	5683953	.	G	GC	432.62	PASS	AB=0.877;AC=12;AF=0.240;AN=50;BaseQRankSum=6.619;DP=724;FS=0.767;HRun=0;HaplotypeScore=83.0635;InbreedingCoeff=-0.0489;MQ=32.81;MQ0=139;MQRankSum=-3.128;QD=1.90;ReadPosRankSum=-2.353;VQSLOD=1.9947;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:9:6.02:0,6,84	0/0:4,0:2:2.98:0,3,21	0/0:70,0:3:9.03:0,9,109	0/1:97,0:6:3.15:3,0,94	0/0:3,0:1:3.01:0,3,41	0/0:17,0:13:14.93:0,15,193	0/0:51,0:49:16.22:0,16,495	0/0:12,0:3:2.67:0,3,40	1/1:5,7:9:3.86:135,4,0	0/0:17,1:11:1.42:0,1,273	0/0:4,0:2:3.01:0,3,40	0/0:38,0:29:29.08:0,29,304	0/0:23,1:23:24.56:0,25,363	0/1:26,0:17:2.93:3,0,343	1/1:5,3:8:6.02:77,6,0	0/1:5,3:9:32.04:92,0,32	0/1:13,2:8:40.70:41,0,73	0/1:13,2:15:28.96:29,0,279	0/0:9,0:3:8.39:0,8,79	./.	0/0:118,3:101:55.19:0,55,698	./.	0/0:2,0:1:3.01:0,3,42	0/0:65,8:62:10.23:0,10,525	0/1:10,5:7:13.91:14,0,36	0/1:15,2:9:68.41:93,0,68	./.	0/1:7,2:7:9.98:78,0,10
chr10	5683963	.	CTG	C	64.69	PASS	AC=2;AF=0.040;AN=50;BaseQRankSum=3.471;DP=694;FS=0.000;HRun=0;HaplotypeScore=91.0264;InbreedingCoeff=0.4036;MQ=37.68;MQ0=110;MQRankSum=-3.576;QD=4.62;ReadPosRankSum=-0.594;VQSLOD=2.5745;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:10:9.03:0,9,156	0/0:5,0:3:6.02:0,6,99	0/0:63,0:9:13.56:0,14,249	0/0:85,0:8:12.51:0,13,164	0/0:2,0:1:3.01:0,3,56	0/0:18,0:15:12.75:0,13,369	0/0:51,0:46:51.93:0,52,1137	0/0:9,0:4:9.03:0,9,135	0/0:10,0:8:13.59:0,14,147	0/0:17,0:13:36.08:0,36,590	0/0:8,0:5:3.01:0,3,56	0/0:40,0:32:46.09:0,46,778	0/0:24,1:25:45.15:0,45,802	0/0:30,0:21:39.60:0,40,703	0/0:11,0:9:3.95:0,4,39	0/0:10,0:10:9.87:0,10,111	1/1:11,3:9:11.76:149,12,0	0/0:21,0:21:42.61:0,43,757	0/0:9,0:3:9.03:0,9,153	./.	0/0:106,0:85:81.22:0,81,1435	./.	0/0:3,0:2:6.02:0,6,112	0/0:81,0:66:72.96:0,73,1283	0/0:15,0:7:5.99:0,6,61	0/0:18,0:11:27.04:0,27,359	./.	0/0:9,0:7:15.05:0,15,228
chr10	5683970	.	G	GTGC	98.84	PASS	AB=0.980;AC=9;AF=0.180;AN=50;BaseQRankSum=5.229;DP=680;FS=14.689;HRun=0;HaplotypeScore=105.3051;InbreedingCoeff=-0.0156;MQ=42.49;MQ0=97;MQRankSum=-3.961;QD=0.46;ReadPosRankSum=0.479;VQSLOD=0.9839;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:7:9.03:0,9,144	0/0:4,0:3:6.02:0,6,95	0/1:61,0:10:23.24:23,0,209	0/1:82,0:9:4.73:5,0,92	0/0:2,0:1:3.01:0,3,48	0/0:21,0:19:30.20:0,30,436	0/0:54,0:48:74.34:0,74,1121	0/0:10,0:5:12.02:0,12,149	0/1:9,2:10:6.61:100,0,7	0/0:14,0:13:30.10:0,30,463	0/0:7,0:5:3.01:0,3,48	0/0:41,0:34:45.62:0,46,711	0/0:28,0:28:51.07:0,51,792	0/0:30,0:24:40.26:0,40,697	1/1:9,1:9:2.08:14,2,0	0/1:9,0:9:7.87:12,0,8	0/1:14,0:9:27.63:28,0,54	0/0:21,0:21:48.13:0,48,715	0/0:6,0:3:8.62:0,9,107	./.	0/0:101,0:81:93.31:0,93,1442	./.	0/0:2,0:2:6.02:0,6,96	0/0:83,0:68:81.01:0,81,1295	0/0:12,2:7:3:0,3,27	0/1:19,0:12:35.26:35,0,124	./.	0/1:8,0:7:2.01:2,0,161
chr10	5683982	.	G	GC	388.46	PASS	AB=0.905;AC=15;AF=0.288;AN=52;BaseQRankSum=7.853;DP=660;FS=4.733;HRun=0;HaplotypeScore=102.8202;InbreedingCoeff=0.3163;MQ=49.28;MQ0=54;MQRankSum=-6.064;QD=1.89;ReadPosRankSum=-0.095;VQSLOD=2.1046;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:10,1:7:12.04:0,12,168	0/0:5,0:4:9.03:0,9,126	0/0:53,0:13:22.23:0,22,309	0/0:72,2:15:19.21:0,19,175	0/0:4,0:4:6.02:0,6,84	0/0:20,1:20:27.10:0,27,430	0/0:57,1:53:64.53:0,65,1171	0/0:12,0:6:12.04:0,12,168	1/1:2,10:10:15.05:218,15,0	0/1:14,1:14:11.87:12,0,418	0/0:7,1:6:6.02:0,6,84	0/0:39,1:34:2.46:0,2,612	0/0:28,1:29:21.48:0,21,857	0/0:30,3:30:24:0,24,834	1/1:2,6:7:3:29,3,0	1/1:3,4:7:4.46:52,4,0	1/1:10,2:8:6.76:86,7,0	0/1:22,2:23:6.40:6,0,587	1/1:3,0:2:5.69:30,6,0	./.	0/1:84,7:81:34.80:35,0,1499	./.	0/0:3,0:3:6.02:0,6,84	0/0:78,8:75:95.16:0,95,1317	0/0:3,3:4:0:0,0,0	0/1:20,3:15:57.35:57,0,297	0/0:3,1:2:2.97:0,3,20	0/1:5,1:5:17.18:17,0,84
chr10	5683989	.	GTGC	G	228.88	PASS	AB=0.881;AC=13;AF=0.250;AN=52;BaseQRankSum=8.521;DP=644;FS=11.063;HRun=0;HaplotypeScore=120.2576;InbreedingCoeff=0.4169;MQ=58.11;MQ0=46;MQRankSum=-6.569;QD=2.63;ReadPosRankSum=-0.855;VQSLOD=1.7784;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:16:24.04:0,24,363	0/0:4,0:3:9.03:0,9,155	0/0:45,0:14:14.36:0,14,309	0/0:73,0:24:22.20:0,22,260	0/0:5,0:4:6.02:0,6,110	0/0:21,0:20:13.87:0,14,674	0/0:61,1:57:82.06:0,82,1621	0/0:12,0:7:13.84:0,14,217	1/1:9,4:10:14.97:150,15,0	0/0:14,0:14:20.25:0,20,495	0/0:8,0:6:6.02:0,6,110	0/0:34,1:33:51.85:0,52,965	0/0:31,0:31:38.88:0,39,1405	0/0:37,0:35:76.12:0,76,1476	1/1:5,2:6:3.01:34,3,0	1/1:7,1:8:3.01:34,3,0	0/0:13,0:10:5.14:0,5,45	0/1:23,2:24:9.30:9,0,911	./.	1/1:2,0:2:0.47:1,0,0	0/0:78,3:71:99:0,128,2538	./.	0/0:3,0:3:9.03:0,9,198	0/0:75,5:72:99:0,111,2174	0/0:6,0:4:0.88:0,1,2	0/1:20,3:14:80.62:81,0,295	1/1:4,0:2:2.74:12,3,0	0/1:4,1:5:30.59:47,0,31
chr10	5683992	.	C	CTG	313.53	PASS	AB=0.983;AC=14;AF=0.259;AN=54;BaseQRankSum=8.073;DP=651;FS=0.000;HRun=0;HaplotypeScore=123.0075;InbreedingCoeff=0.3008;MQ=58.40;MQ0=38;MQRankSum=-4.316;QD=1.75;ReadPosRankSum=-0.994;VQSLOD=2.2855;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:15:24.08:0,24,350	0/0:3,0:3:9.03:0,9,132	0/0:41,0:14:11.46:0,11,289	0/1:71,0:25:0.76:1,0,221	0/0:6,0:4:6.02:0,6,88	0/0:23,0:22:24.86:0,25,498	0/0:51,7:54:85.52:0,86,1317	0/0:12,0:7:13.90:0,14,218	1/1:11,1:10:14.75:190,15,0	0/1:14,1:14:52.60:53,0,384	0/0:6,0:6:6.02:0,6,88	0/0:36,0:34:38.88:0,39,733	0/0:32,1:33:41.88:0,42,1063	0/0:37,0:36:58.44:0,58,1083	1/1:5,3:8:3:39,3,0	1/1:4,4:8:2.77:55,3,0	0/0:11,0:10:8.88:0,9,58	0/1:24,1:24:52.44:52,0,645	0/1:6,0:2:0:0,0,0	1/1:5,0:5:0.47:1,0,0	0/0:82,1:74:53.49:0,53,1841	./.	0/0:5,0:5:9.92:0,10,134	0/0:80,3:76:99:0,114,1633	0/0:6,1:5:0.70:0,1,2	0/1:22,0:17:44.37:44,0,297	0/0:3,0:2:0.89:0,1,2	0/1:5,0:5:13.61:14,0,83
chr10	5684000	.	CTG	C	450.22	PASS	AB=0.794;AC=13;AF=0.241;AN=54;BaseQRankSum=6.607;DP=663;FS=38.323;HRun=0;HaplotypeScore=115.7699;InbreedingCoeff=0.3569;MQ=58.52;MQ0=46;MQRankSum=-4.721;QD=5.49;ReadPosRankSum=0.450;VQSLOD=1.4853;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:17:24.06:0,24,393	0/0:3,0:3:9.03:0,9,151	0/0:39,2:12:9.95:0,10,110	0/0:76,2:23:30.08:0,30,259	0/0:9,0:7:15.05:0,15,254	0/0:21,0:20:43.96:0,44,792	0/0:54,0:50:97.32:0,97,1752	0/1:12,1:8:28.15:28,0,178	1/1:4,6:8:9.02:108,9,0	0/0:20,0:17:45.08:0,45,690	0/0:10,0:8:6.02:0,6,104	0/0:38,0:36:60.67:0,61,1029	0/0:34,0:33:80.33:0,80,1408	0/0:37,0:36:87.29:0,87,1533	0/1:1,7:8:0:0,0,0	1/1:1,6:7:2.79:43,3,0	0/0:13,0:11:12.10:0,12,160	0/0:24,0:23:53.93:0,54,923	0/1:7,1:2:27.57:38,0,28	1/1:1,3:4:2.05:41,2,0	0/0:83,0:74:99:0,156,2675	./.	0/0:6,0:6:17.27:0,17,282	0/0:81,0:75:99:0,127,2278	0/0:6,2:7:1.82:0,2,5	0/1:16,6:17:99:255,0,231	1/1:5,0:2:3:27,3,0	0/1:4,1:5:54.40:54,0,80
chr10	5684022	.	GTGC	G	243.99	PASS	AB=0.931;AC=11;AF=0.196;AN=56;BaseQRankSum=7.891;DP=738;FS=1.509;HRun=0;HaplotypeScore=156.3258;InbreedingCoeff=0.2287;MQ=60.04;MQ0=39;MQRankSum=-2.412;QD=1.09;ReadPosRankSum=0.338;VQSLOD=2.8445;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,3:19:2.75:27,3,0	0/0:3,0:3:6.02:0,6,110	0/1:46,2:17:27.24:27,0,252	0/1:81,7:39:99:173,0,527	0/0:11,0:9:15.04:0,15,233	0/0:24,0:24:54.18:0,54,1050	0/0:52,0:48:88.46:0,88,1611	0/0:21,0:15:39.13:0,39,563	0/0:16,0:13:2.50:0,2,153	0/0:25,0:22:63.07:0,63,981	0/0:4,0:3:3.01:0,3,66	0/0:36,0:34:43.38:0,43,827	0/0:31,0:30:79.18:0,79,1525	0/0:37,0:35:78.21:0,78,1515	0/1:9,0:9:0:0,0,0	0/0:20,0:20:3.09:0,3,38	1/1:15,0:13:1.66:55,2,0	0/0:20,1:21:49.72:0,50,993	0/0:18,0:12:33.11:0,33,469	0/0:9,0:9:2.47:0,2,13	0/0:81,0:73:99:0,171,2947	0/0:8,0:8:3.01:0,3,31	0/0:9,0:9:22.79:0,23,413	0/0:71,2:70:99:0,117,2175	0/0:13,1:14:3.37:0,3,46	0/1:25,2:23:35.38:35,0,575	0/1:9,2:8:8.88:9,0,161	1/1:1,2:3:6.87:49,7,0
chr10	5684025	.	C	CTG	318.05	PASS	AB=0.947;AC=8;AF=0.148;AN=54;BaseQRankSum=7.011;DP=738;FS=3.578;HRun=0;HaplotypeScore=154.7618;InbreedingCoeff=0.2256;MQ=60.16;MQ0=39;MQRankSum=-2.944;QD=1.57;ReadPosRankSum=-1.944;VQSLOD=2.4719;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:19:12.36:145,12,0	0/0:3,0:3:6.02:0,6,88	0/1:46,0:16:29.08:29,0,255	0/1:90,0:41:99:190,0,520	0/0:10,0:8:15.04:0,15,201	0/0:23,0:23:54.18:0,54,797	0/0:50,0:46:99:0,99,1406	0/0:25,0:20:50.84:0,51,692	0/0:17,0:14:10.80:0,11,129	0/0:27,0:24:63.08:0,63,925	0/0:4,0:3:3.01:0,3,44	0/0:32,0:30:43.02:0,43,618	0/0:30,0:29:78.43:0,78,1190	0/0:38,0:36:78.24:0,78,1126	./.	0/0:21,0:21:5.16:0,5,51	0/1:11,4:13:4.64:48,0,5	0/0:20,0:20:31.98:0,32,718	0/0:18,0:12:33.11:0,33,457	0/0:8,0:8:2.85:0,3,19	0/0:83,0:75:99:0,171,2484	0/0:8,0:8:3.01:0,3,38	0/0:10,0:10:25.75:0,26,395	0/0:69,1:66:99:0,117,1681	0/0:16,0:16:3.90:0,4,46	0/1:28,0:24:10.59:11,0,608	0/0:11,0:8:0.36:0,0,162	1/1:3,0:3:3.04:25,3,0
chr10	5684051	.	GCT	G	1487.68	PASS	AB=1.000;AC=33;AF=0.786;AN=42;BaseQRankSum=-0.788;DP=654;FS=7.134;HRun=0;HaplotypeScore=138.2259;InbreedingCoeff=0.4847;MQ=56.52;MQ0=28;MQRankSum=0.713;QD=3.22;ReadPosRankSum=2.888;VQSLOD=2.0338;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:22:0.09:0,0,0	1/1:3,0:6:2.77:16,3,0	./.	0/0:69,0:38:0.89:0,1,2	0/0:12,0:11:3.45:0,3,23	1/1:16,1:17:11.72:90,12,0	1/1:38,1:36:12.34:79,12,0	./.	1/1:18,0:15:5.51:28,6,0	1/1:31,1:30:20.79:162,21,0	./.	1/1:24,4:27:20.86:194,21,0	1/1:22,5:27:23.85:169,24,0	1/1:27,3:29:11.77:82,12,0	./.	0/1:19,0:18:0:0,0,0	1/1:14,0:12:5.60:26,6,0	1/1:15,0:13:11.90:85,12,0	./.	0/0:10,0:9:0:0,0,0	1/1:56,3:55:16.62:253,17,0	./.	1/1:11,1:12:2.98:22,3,0	1/1:49,5:55:23.06:220,23,0	0/1:16,0:15:0:0,0,0	1/1:26,0:23:14.20:70,14,0	1/1:12,0:10:17.04:84,17,0	./.
chr10	5684053	.	T	TGTG	4061.80	PASS	AB=0.955;AC=24;AF=0.444;AN=54;BaseQRankSum=3.098;DP=632;FS=22.259;HRun=0;HaplotypeScore=132.6959;InbreedingCoeff=0.7556;MQ=56.37;MQ0=31;MQRankSum=-5.660;QD=19.16;ReadPosRankSum=-0.565;VQSLOD=1.8047;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:24,2:22:20.77:483,21,0	0/0:6,0:6:12.03:0,12,188	0/0:35,0:17:32.99:0,33,597	0/0:65,0:37:42.59:0,43,1146	0/0:12,0:11:15.50:0,15,239	0/0:15,0:15:36.11:0,36,584	0/0:41,0:37:75.24:0,75,1313	1/1:21,0:17:51.18:1178,51,0	1/1:16,0:13:15:250,15,0	0/0:33,0:29:47.67:0,48,1170	0/0:8,0:8:3:0,3,54	0/1:30,0:27:21.40:21,0,513	0/0:27,0:26:66.19:0,66,1011	0/0:30,0:29:63.21:0,63,1041	./.	1/1:18,1:18:2.93:65,3,0	1/1:15,0:12:9.03:137,9,0	0/0:14,0:12:27.09:0,27,427	1/1:7,0:7:15.05:323,15,0	0/1:9,1:9:0.18:0,0,0	0/0:57,0:53:99:0,109,1821	1/1:11,0:10:3.01:70,3,0	0/0:11,0:11:12.03:0,12,172	0/0:58,0:57:58.04:0,58,1728	1/1:17,0:16:0.87:2,1,0	1/1:23,0:21:60.19:1157,60,0	1/1:12,0:10:21.04:243,21,0	1/1:4,0:2:6.02:132,6,0
chr10	5684055	.	T	TG	2507.15	PASS	AB=0.756;AC=23;AF=0.411;AN=56;BaseQRankSum=7.820;DP=637;FS=19.598;HRun=0;HaplotypeScore=125.4286;InbreedingCoeff=0.7760;MQ=55.23;MQ0=32;MQRankSum=-6.480;QD=13.34;ReadPosRankSum=0.394;VQSLOD=3.4411;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,14:22:10.92:307,11,0	0/0:6,0:6:11.87:0,12,138	0/0:32,0:15:35.25:0,35,490	0/0:61,0:35:49.40:0,49,864	0/0:12,0:11:15.94:0,16,209	0/0:16,0:16:36.03:0,36,436	0/0:43,0:39:75.17:0,75,958	1/1:1,20:17:51.16:740,51,0	1/1:2,6:13:14.64:184,15,0	0/0:35,0:30:62.09:0,62,940	0/0:8,0:8:3:0,3,41	0/0:27,0:24:44.51:0,45,456	0/0:27,0:26:62.96:0,63,716	0/0:32,0:31:63.13:0,63,803	0/1:0,3:7:0:0,0,0	1/1:2,4:18:2.90:47,3,0	1/1:9,5:11:9.03:112,9,0	0/0:16,0:14:29.97:0,30,324	1/1:2,5:6:2.91:190,3,0	0/1:2,3:9:0.22:0,0,0	0/0:60,0:55:99:0,114,1355	1/1:2,1:9:3.01:46,3,0	0/0:10,0:10:9.02:0,9,109	0/0:63,0:62:99:0,119,1428	0/1:2,5:16:0.03:0,0,0	1/1:2,9:21:60.13:793,60,0	1/1:3,1:10:20.99:188,21,0	1/1:4,0:2:6.02:86,6,0
chr10	5684118	.	GTCTATGTATGTCTGTC	G	292.33	PASS	AB=0.941;AC=4;AF=0.071;AN=56;BaseQRankSum=6.148;DP=742;FS=53.144;HRun=0;HaplotypeScore=321.3490;InbreedingCoeff=-0.0738;MQ=49.11;MQ0=15;MQRankSum=-5.262;QD=3.56;ReadPosRankSum=-5.412;VQSLOD=-0.3936;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:36:53.08:0,53,2893	0/0:13,0:13:23.81:0,24,1646	0/0:46,0:24:72.25:0,72,3734	0/0:43,0:20:54.22:0,54,2674	0/0:21,0:20:39.07:0,39,2295	0/0:18,0:18:33.08:0,33,2280	0/0:34,0:33:44.97:0,45,3475	0/1:18,8:22:99:273,0,1926	0/0:33,0:29:56.71:0,57,3035	0/0:29,0:28:58.17:0,58,4217	0/0:17,0:17:32.62:0,33,2243	0/0:25,0:24:52.04:0,52,3047	0/0:23,0:23:22.01:0,22,3400	0/0:27,0:26:37.09:0,37,2449	0/0:26,0:24:33.30:0,33,2211	0/0:22,0:21:20.79:0,21,1168	0/0:26,0:25:50.35:0,50,2392	0/0:21,0:20:15.76:0,16,3661	0/0:19,0:14:37.41:0,37,1898	0/0:13,0:9:12.51:0,13,844	0/0:47,0:45:99:0,108,6479	0/0:24,0:24:32.55:0,33,2221	0/0:16,0:15:33.11:0,33,2160	0/0:53,0:54:99:0,129,8270	0/0:25,0:25:35.11:0,35,2298	0/1:29,0:25:97.53:98,0,2891	0/1:20,0:18:4.89:5,0,1456	0/1:7,0:7:20.29:20,0,1145
chr10	5684490	.	GCA	G	10818.24	PASS	AB=0.538;AC=23;AF=0.411;AN=56;BaseQRankSum=15.970;DP=762;FS=6.258;HRun=0;HaplotypeScore=94.1405;InbreedingCoeff=0.9261;MQ=87.63;MQ0=0;MQRankSum=-3.377;QD=34.45;ReadPosRankSum=2.400;VQSLOD=7.3493;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:64,0:64:99:0,181,3120	0/0:10,0:10:30.10:0,30,530	0/0:24,0:24:51.17:0,51,883	0/0:30,0:30:69.14:0,69,1070	0/0:17,0:17:45.15:0,45,792	0/0:25,0:25:60.21:0,60,1051	0/0:30,0:30:87.30:0,87,1495	1/1:4,34:38:99:1400,102,0	1/1:2,25:27:69.23:948,69,0	0/0:25,0:25:69.24:0,69,1225	0/0:16,0:16:35.18:0,35,629	0/0:28,0:28:78.27:0,78,1371	0/0:24,0:24:57.20:0,57,1002	0/0:28,0:28:78.27:0,78,1377	1/1:1,27:28:72.24:990,72,0	1/1:2,22:24:63.21:866,63,0	1/1:2,45:47:99:1608,117,0	0/0:22,0:22:60.21:0,60,1060	1/1:5,13:18:39.12:519,39,0	1/1:0,18:18:51.13:679,51,0	0/0:52,0:52:99:0,148,2596	1/1:3,24:27:69.23:948,69,0	0/0:17,0:17:51.17:0,51,903	0/0:36,0:36:99:0,102,1810	1/1:2,22:24:57.10:740,57,0	0/1:3,18:21:46.26:678,0,46	1/1:0,17:17:45.15:618,45,0	1/1:0,25:25:60.20:824,60,0
chr10	5685411	.	C	CGT	3669.99	PASS	AB=0.692;AC=9;AF=0.161;AN=56;BaseQRankSum=-6.273;DP=858;FS=1.381;HRun=0;HaplotypeScore=129.5164;InbreedingCoeff=0.8594;MQ=59.90;MQ0=9;MQRankSum=1.186;QD=24.97;ReadPosRankSum=-1.939;VQSLOD=3.7039;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,2:36:46.23:422,46,0	0/0:9,0:9:21.07:0,21,258	0/0:33,0:15:17.76:0,18,154	0/0:38,0:22:30.09:0,30,362	0/0:30,0:31:66.46:0,66,789	0/0:16,0:17:42.43:0,42,493	0/0:38,0:38:90.28:0,90,1107	1/1:17,27:45:13.35:1139,13,0	0/0:24,0:23:51.16:0,51,628	0/0:34,0:36:89.28:0,89,1005	0/0:16,0:16:36.03:0,36,443	0/0:43,0:43:84.08:0,84,1020	0/0:24,0:25:42.56:0,43,489	0/0:34,0:34:60.19:0,60,738	0/0:14,0:14:26.96:0,27,320	0/0:19,0:19:48.15:0,48,590	0/0:28,0:28:45.14:0,45,551	0/0:24,0:24:47.17:0,47,638	0/0:22,0:21:27.04:0,27,315	0/0:25,0:26:57.01:0,57,678	0/0:117,0:123:99:0,239,2765	0/0:25,0:26:56.77:0,57,636	0/0:19,0:19:36.11:0,36,443	0/0:38,0:38:60.14:0,60,712	0/0:25,0:26:53.98:0,54,627	1/1:11,20:32:35.25:1003,35,0	1/1:7,18:25:54.02:880,54,0	0/1:5,4:9:18.85:225,0,19
chr10	5685460	.	TTGTG	T	6529.95	PASS	AB=0.866;AC=35;AF=0.673;AN=52;BaseQRankSum=-4.972;DP=863;FS=2.411;HRun=0;HaplotypeScore=172.3861;InbreedingCoeff=0.6368;MQ=54.06;MQ0=30;MQRankSum=-0.487;QD=10.58;ReadPosRankSum=0.706;VQSLOD=4.3252;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:26,1:41:99:112,0,242	1/1:8,4:12:5.91:64,6,0	./.	./.	1/1:16,11:28:1.64:182,2,0	1/1:8,16:26:24.53:588,25,0	1/1:19,24:42:13.78:506,14,0	0/0:52,0:49:13.87:0,14,87	0/0:9,0:18:12.04:0,12,230	1/1:23,17:40:52.88:705,53,0	1/1:10,6:15:8.78:115,9,0	1/1:22,16:37:11.23:411,11,0	1/1:8,19:28:36.01:475,36,0	1/1:14,20:34:9.78:331,10,0	0/1:11,1:28:5.74:6,0,642	0/0:10,0:15:21.01:0,21,299	1/1:7,21:28:27.09:430,27,0	1/1:11,12:22:10.97:322,11,0	0/0:20,0:21:11.83:0,12,146	0/0:17,0:27:17.56:0,18,344	1/1:62,41:104:49.23:857,49,0	0/0:16,0:30:26.12:0,26,477	1/1:8,16:24:21.22:310,21,0	1/1:10,29:39:45.15:718,45,0	0/0:10,0:19:6.02:0,6,105	0/1:24,0:27:33.91:145,0,34	1/1:16,0:18:14.08:113,14,0	1/1:7,0:13:15.02:139,15,0
chr10	5688288	.	CT	C	1583.09	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=8.016;DP=835;FS=7.527;HRun=1;HaplotypeScore=82.3229;InbreedingCoeff=0.9999;MQ=77.16;MQ0=0;MQRankSum=-5.031;QD=38.61;ReadPosRankSum=1.773;VQSLOD=4.1537;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,41:41:99:1678,120,0	0/0:13,0:13:39.13:0,39,616	0/0:26,0:26:77.29:0,77,1179	0/0:22,0:21:48.41:0,48,656	0/0:29,0:29:87.30:0,87,1391	0/0:32,0:32:93.32:0,93,1462	0/0:28,0:28:84.27:0,84,1317	0/0:32,0:32:96.32:0,96,1500	0/0:23,0:23:69.24:0,69,1103	0/0:47,0:47:99:0,141,2227	0/0:25,0:25:72.23:0,72,1128	0/0:28,0:28:84.29:0,84,1341	0/0:36,0:36:99:0,108,1727	0/0:28,0:28:84.27:0,84,1320	0/0:24,0:24:72.25:0,72,1151	0/0:23,0:23:69.24:0,69,1096	0/0:44,0:44:99:0,132,2079	0/0:29,0:29:81.22:0,81,1236	0/0:24,0:24:72.25:0,72,1144	0/0:26,0:26:78.27:0,78,1247	0/0:28,0:28:84.27:0,84,1318	0/0:37,0:37:99:0,108,1694	0/0:33,0:33:99:0,99,1546	0/0:40,0:40:99:0,120,1888	0/0:31,0:31:93.32:0,93,1485	0/0:39,0:39:99:0,117,1821	0/0:33,0:32:96.33:0,96,1526	0/0:14,0:14:38.95:0,39,622
chr10	5689835	.	AACACAC	A	286.77	PASS	AB=0.780;AC=14;AF=0.304;AN=46;BaseQRankSum=3.383;DP=502;FS=0.000;HRun=0;HaplotypeScore=105.8643;InbreedingCoeff=0.5098;MQ=65.72;MQ0=14;MQRankSum=-2.715;QD=2.54;ReadPosRankSum=-0.562;VQSLOD=1.6231;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:28:12.02:0,12,168	1/1:4,1:5:3.01:60,3,0	./.	./.	0/0:7,2:9:0.89:0,1,2	0/1:7,2:10:51.29:51,0,81	1/1:19,0:18:2.96:38,3,0	0/0:25,0:24:16.10:0,16,310	0/0:21,0:26:15.52:0,16,427	0/0:12,0:12:1.55:0,2,4	0/1:14,3:19:0.28:0,0,0	1/1:11,4:15:6.02:121,6,0	1/1:5,1:7:6.02:102,6,0	./.	0/0:8,0:8:9.03:0,9,233	0/0:15,0:21:24.55:0,25,606	1/1:21,0:23:2.32:41,2,0	0/0:15,0:15:1.55:0,2,4	0/0:15,0:15:18.06:0,18,509	0/0:8,0:16:9.71:0,10,289	0/0:36,0:34:2.99:0,3,24	./.	1/1:11,4:15:0.94:1,1,0	./.	0/0:17,0:17:27.09:0,27,716	0/0:16,0:14:15.05:0,15,314	0/0:10,0:10:12.04:0,12,338	0/0:9,0:8:12.04:0,12,350
chr10	5690032	.	TTGTTGC	T	191.73	PASS	AB=0.984;AC=7;AF=0.125;AN=56;BaseQRankSum=2.949;DP=669;FS=20.402;HRun=0;HaplotypeScore=123.8954;InbreedingCoeff=0.1486;MQ=59.36;MQ0=17;MQRankSum=-1.185;QD=1.65;ReadPosRankSum=-1.251;VQSLOD=0.9198;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,32:35:9.02:199,9,0	0/0:12,0:12:8.91:0,9,204	0/0:37,0:24:42.57:0,43,408	0/0:32,0:24:56.03:0,56,680	0/1:10,0:10:13.90:14,0,63	0/0:15,0:15:25.12:0,25,213	0/0:32,0:32:50.73:0,51,446	0/0:32,0:31:81:0,81,937	0/0:27,0:27:80.95:0,81,1791	0/1:15,0:13:13.11:13,0,175	0/1:7,0:7:35.89:36,0,60	0/0:26,0:26:34.05:0,34,383	0/0:24,0:25:42.04:0,42,412	0/1:27,1:28:17.43:17,0,332	0/0:23,0:23:69.13:0,69,1674	0/0:29,0:29:83.97:0,84,2360	0/0:49,0:49:99:0,132,3720	0/1:20,1:21:41.75:42,0,166	0/0:14,0:11:24.03:0,24,360	0/0:8,0:8:17.99:0,18,253	0/0:34,0:32:59.81:0,60,486	0/0:22,0:22:50.84:0,51,410	0/0:7,0:7:13:0,13,84	0/0:52,1:53:30.59:0,31,614	0/0:20,0:19:41.50:0,41,547	0/0:26,0:24:62.90:0,63,650	0/0:21,0:21:60.15:0,60,1568	0/0:7,0:7:21.07:0,21,652
chr10	5690035	.	TTGC	T	2896.43	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=10.493;DP=633;FS=2.325;HRun=0;HaplotypeScore=77.3751;InbreedingCoeff=0.8147;MQ=59.52;MQ0=18;MQRankSum=0.051;QD=9.59;ReadPosRankSum=4.552;VQSLOD=2.6190;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:32,0:32:8.98:79,9,0	1/1:9,3:12:12.02:150,12,0	0/0:35,0:21:7.15:0,7,98	0/0:31,0:23:11.93:0,12,116	1/1:6,0:6:6:51,6,0	1/1:8,5:13:3.01:42,3,0	1/1:12,18:30:15.05:211,15,0	0/0:30,0:29:34.70:0,35,326	0/0:27,0:27:34.86:0,35,835	1/1:13,0:11:3.01:42,3,0	1/1:6,0:6:6:52,6,0	1/1:8,17:25:36.12:506,36,0	1/1:10,14:24:39.13:546,39,0	1/1:12,17:29:24.07:322,24,0	0/0:25,0:25:57.12:0,57,909	0/0:29,0:29:71.94:0,72,1258	0/0:46,0:46:99:0,117,1994	1/1:5,14:19:19.30:240,19,0	0/0:15,0:11:20.61:0,21,210	0/0:6,0:6:6:0,6,83	1/1:18,16:32:12.04:169,12,0	0/0:18,0:18:0:0,0,0	1/1:6,0:6:3.01:42,3,0	1/1:18,35:53:48.12:652,48,0	0/0:17,0:16:15.04:0,15,214	0/0:24,0:22:9.01:0,9,107	0/0:21,0:21:48.11:0,48,804	0/0:7,0:7:21.04:0,21,369
chr10	5691548	.	CT	C	1346.18	PASS	AB=0.678;AC=7;AF=0.130;AN=54;BaseQRankSum=-2.219;DP=625;FS=27.014;HRun=1;HaplotypeScore=159.1571;InbreedingCoeff=0.1305;MQ=45.41;MQ0=37;MQRankSum=0.281;QD=9.83;ReadPosRankSum=0.808;VQSLOD=-0.0707;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:18,11:26:99:287,0,224	0/0:14,1:13:15.36:0,15,221	./.	0/0:2,0:1:3.01:0,3,35	0/0:32,14:35:39.09:0,39,511	0/1:5,15:19:10.62:184,0,11	0/0:13,4:11:2.63:0,3,20	0/0:29,0:10:30.10:0,30,443	0/0:26,0:26:60.61:0,61,884	0/1:29,6:32:99:203,0,659	0/0:21,11:28:29.88:0,30,427	0/0:17,7:23:24.55:0,25,369	1/1:3,14:17:24:327,24,0	0/1:10,10:20:19.54:20,0,148	0/0:17,0:17:36.04:0,36,520	0/0:25,0:25:75.22:0,75,1077	0/0:15,0:12:6.02:0,6,80	0/1:4,12:15:18.90:459,0,19	0/0:15,0:12:36.12:0,36,538	0/0:34,0:32:75.04:0,75,1104	0/0:10,0:7:15.03:0,15,173	0/0:30,0:29:75.24:0,75,1081	0/0:16,5:18:18.04:0,18,235	0/0:10,6:16:5.05:0,5,50	0/0:40,0:40:99:0,106,1527	0/0:35,0:34:98.96:0,99,1223	0/0:20,0:20:60.20:0,60,886	0/0:14,0:12:33.11:0,33,480
chr10	5691552	.	CT	C	916.73	PASS	AB=0.914;AC=12;AF=0.214;AN=56;BaseQRankSum=-2.872;DP=620;FS=4.368;HRun=1;HaplotypeScore=153.6397;InbreedingCoeff=0.2355;MQ=44.72;MQ0=31;MQRankSum=0.387;QD=4.26;ReadPosRankSum=-0.561;VQSLOD=0.1181;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:26:38.69:0,39,390	0/0:13,1:12:11.13:0,11,89	0/0:7,0:2:6.02:0,6,85	0/0:4,0:2:6.02:0,6,81	0/1:42,6:37:99:135,0,155	0/1:20,1:20:19.86:44,0,20	0/0:17,0:11:1.88:0,2,7	0/0:29,0:13:39.13:0,39,575	0/0:25,0:25:57.60:0,58,840	0/1:23,9:29:99:412,0,476	0/1:29,2:27:18.83:19,0,182	0/0:24,2:25:24.23:0,24,204	0/0:19,0:19:21.88:0,22,202	1/1:13,8:21:15.94:246,16,0	0/0:16,0:16:36.06:0,36,534	0/0:25,0:25:72.18:0,72,1033	0/0:12,2:10:3.01:0,3,38	0/1:16,0:15:18.19:18,0,127	0/0:14,0:12:36.10:0,36,517	0/0:32,0:30:72.03:0,72,1052	1/1:4,4:5:9.03:126,9,0	0/0:30,0:29:75.25:0,75,1099	0/1:21,2:20:32.93:33,0,64	1/1:12,3:15:3.01:40,3,0	0/0:40,0:40:99:0,106,1527	0/0:32,0:31:89.97:0,90,1106	0/0:20,0:20:60.20:0,60,886	0/0:12,0:12:33.09:0,33,463
chr10	5691556	.	CT	C	831.12	PASS	AB=0.911;AC=10;AF=0.179;AN=56;BaseQRankSum=-4.074;DP=633;FS=4.783;HRun=1;HaplotypeScore=154.1539;InbreedingCoeff=0.5532;MQ=44.54;MQ0=29;MQRankSum=1.364;QD=4.83;ReadPosRankSum=-1.698;VQSLOD=-0.1928;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:24:42.47:0,42,573	1/1:7,8:13:11.02:162,11,0	0/0:10,0:3:9:0,9,109	0/0:4,0:2:6.02:0,6,86	0/1:39,8:37:29.55:255,0,30	0/0:23,0:22:14:0,14,173	0/0:17,0:11:1.69:0,2,4	0/0:34,0:18:54.18:0,54,796	0/0:23,0:23:54.09:0,54,752	0/1:29,1:27:6.49:6,0,625	1/1:22,7:25:13:184,13,0	1/1:14,14:27:23.10:334,23,0	0/0:20,0:20:23.88:0,24,380	0/0:25,0:25:13.19:0,13,74	0/0:16,0:16:36.05:0,36,498	0/0:28,0:28:81.15:0,81,1075	0/0:14,0:10:3.01:0,3,44	0/0:14,0:13:33.10:0,33,477	0/0:16,0:14:42.10:0,42,579	0/0:31,0:29:68.97:0,69,927	0/0:7,0:5:4.53:0,5,13	0/0:30,0:29:75.25:0,75,1100	1/1:22,1:20:0.97:39,1,0	0/0:14,0:14:3:0,3,29	0/0:42,0:42:99:0,112,1613	0/0:34,0:33:92.97:0,93,1125	0/0:20,0:20:60.20:0,60,884	0/0:12,0:12:33.11:0,33,474
chr10	5691572	.	CTGTT	C	1331.42	PASS	AB=1.000;AC=25;AF=0.463;AN=54;BaseQRankSum=2.528;DP=624;FS=7.188;HRun=0;HaplotypeScore=161.3796;InbreedingCoeff=0.6812;MQ=41.96;MQ0=24;MQRankSum=-3.345;QD=4.88;ReadPosRankSum=-4.319;VQSLOD=0.8044;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:19:24.31:24,0,360	1/1:16,0:14:6.02:74,6,0	0/0:25,0:11:33.01:0,33,526	0/0:11,0:5:15.05:0,15,266	1/1:42,0:32:14.99:148,15,0	1/1:21,0:20:6.28:57,6,0	0/0:14,0:9:0:0,0,0	0/0:37,0:30:82.95:0,83,1348	0/0:24,0:24:59.11:0,59,901	1/1:27,0:25:51.59:719,52,0	1/1:30,0:25:5.98:48,6,0	1/1:24,0:23:3.48:35,3,0	1/1:21,0:20:14.88:144,15,0	1/1:26,0:26:5.68:62,6,0	0/0:14,0:14:28.52:0,29,410	0/0:29,0:29:71.98:0,72,1174	1/1:14,0:8:1.28:3,1,0	1/1:7,0:6:14.52:140,15,0	0/0:13,0:13:36.22:0,36,512	0/0:32,0:32:76.18:0,76,1071	1/1:6,0:5:3.01:40,3,0	0/0:26,0:24:37.75:0,38,789	./.	1/1:15,0:15:2.99:24,3,0	0/0:33,0:33:78.20:0,78,1248	0/0:36,0:35:0.73:0,1,1163	0/0:17,1:18:18.75:0,19,547	0/0:10,5:17:5.84:0,6,452
chr10	5691594	.	G	GTCTA	8303.26	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-8.394;DP=697;FS=5.240;HRun=0;HaplotypeScore=144.0356;InbreedingCoeff=0.8069;MQ=41.99;MQ0=19;MQRankSum=4.191;QD=21.46;ReadPosRankSum=8.004;VQSLOD=3.9200;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:19:3.84:48,4,0	0/0:13,0:11:5.98:0,6,47	0/0:26,0:14:26.96:0,27,341	0/0:13,0:6:12.02:0,12,156	0/0:36,0:27:2.99:0,3,23	0/0:20,0:19:3:0,3,27	1/1:11,0:8:0.47:1,0,0	1/1:42,0:34:65.87:700,66,0	1/1:32,0:31:45.82:711,46,0	0/0:28,0:27:49.71:0,50,731	0/0:29,0:24:20.99:0,21,237	0/0:18,0:17:8.59:0,9,97	0/0:18,0:17:14.88:0,15,147	0/0:32,0:32:14.65:0,15,192	1/1:26,0:25:14.96:381,15,0	1/1:32,0:32:62.23:1022,62,0	0/0:19,0:13:1.26:0,1,64	0/0:13,0:13:18.78:0,19,151	1/1:16,0:15:32.52:565,33,0	1/1:44,1:45:39.57:940,40,0	0/0:10,0:7:8.99:0,9,75	1/1:40,0:37:44.12:614,44,0	0/0:23,0:20:15.01:0,15,170	0/0:12,0:11:2.98:0,3,22	1/1:41,0:40:43.38:1008,43,0	1/1:8,29:37:56.12:1340,56,0	1/1:21,0:21:36:446,36,0	1/1:19,0:19:24.18:528,24,0
chr10	5691602	.	ATCTGTCTG	A	698.30	PASS	AB=0.953;AC=12;AF=0.214;AN=56;BaseQRankSum=-2.766;DP=688;FS=12.152;HRun=0;HaplotypeScore=191.0600;InbreedingCoeff=-0.0928;MQ=42.50;MQ0=23;MQRankSum=1.877;QD=2.10;ReadPosRankSum=-4.236;VQSLOD=-0.0351;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:18:24.08:0,24,427	0/0:11,0:11:9.03:0,9,213	0/0:21,0:11:26.93:0,27,396	0/0:10,0:4:12.03:0,12,203	0/0:35,0:28:15.05:0,15,239	1/1:18,2:19:2.66:91,3,0	0/0:15,0:8:0.47:0,0,1	0/1:43,0:35:6.32:6,0,282	0/1:24,5:28:78.77:79,0,116	0/0:28,0:26:45.37:0,45,927	0/0:31,0:26:27.08:0,27,743	0/0:17,0:16:11.69:0,12,275	0/0:17,0:16:15.82:0,16,363	0/0:33,0:33:27.08:0,27,726	0/1:27,0:27:94.08:125,0,94	0/1:30,2:32:99:126,0,184	0/0:19,0:14:14.93:0,15,167	0/0:12,0:12:23.21:0,23,403	0/1:17,0:17:97.49:97,0,106	0/1:44,1:44:99:115,0,171	0/0:10,0:7:9.03:0,9,179	0/1:39,1:37:55.83:56,0,117	0/0:24,0:21:21.06:0,21,486	0/0:13,0:12:6:0,6,72	0/1:34,0:39:29.93:128,0,30	0/0:36,0:35:41.71:0,42,994	0/1:18,0:18:14.68:15,0,650	0/1:19,0:19:0.95:1,0,501
chr10	5693264	.	G	GTCCA	19899.58	PASS	AB=1.000;AC=43;AF=0.768;AN=56;BaseQRankSum=-13.079;DP=918;FS=16.699;HRun=0;HaplotypeScore=167.2188;InbreedingCoeff=0.8206;MQ=56.71;MQ0=16;MQRankSum=1.191;QD=27.83;ReadPosRankSum=-0.397;VQSLOD=3.7291;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:37:69.71:0,70,662	1/1:12,6:17:20.86:412,21,0	0/0:38,0:16:1.98:0,2,55	0/0:48,0:24:9.03:0,9,135	1/1:15,5:18:12.04:229,12,0	1/1:17,10:27:36.80:818,37,0	1/1:15,13:28:51.15:1096,51,0	0/1:31,0:42:1.37:1,0,76	1/1:10,18:29:48.16:1148,48,0	1/1:28,12:38:72.24:1462,72,0	1/1:8,5:13:3.89:73,4,0	1/1:20,24:45:6.43:1163,6,0	1/1:16,21:39:51.01:1219,51,0	1/1:15,26:40:15.45:1382,15,0	1/1:11,35:48:69.24:1614,69,0	1/1:19,24:46:45.02:1077,45,0	1/1:10,24:36:42.62:1007,43,0	1/1:4,8:11:13.94:492,14,0	1/1:29,4:30:13.29:290,13,0	1/1:10,14:24:42.14:933,42,0	1/1:51,17:66:54.57:2121,55,0	1/1:11,19:30:24.08:574,24,0	1/1:13,8:20:8.90:188,9,0	1/1:17,14:30:72.11:1665,72,0	1/1:7,17:24:39.13:933,39,0	0/0:9,0:28:22.43:0,22,349	0/0:7,0:32:51.60:0,52,546	0/0:6,0:18:39.04:0,39,363
chr10	5693427	.	GTCCA	G	13029.35	PASS	AB=0.731;AC=25;AF=0.446;AN=56;BaseQRankSum=16.280;DP=1155;FS=1.192;HRun=0;HaplotypeScore=296.9620;InbreedingCoeff=0.9087;MQ=50.26;MQ0=21;MQRankSum=-8.149;QD=23.35;ReadPosRankSum=4.275;VQSLOD=4.0576;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:77,0:77:99:0,191,4216	1/1:12,16:28:11.63:542,12,0	0/0:44,0:10:5.24:0,5,364	0/0:40,0:14:38.93:0,39,686	1/1:9,9:18:4.22:52,4,0	1/1:15,19:34:34.45:634,34,0	1/1:28,11:37:52.56:1005,53,0	0/0:28,0:28:48.13:0,48,945	0/0:46,0:46:99:0,126,2749	1/1:18,34:52:34.12:1521,34,0	1/1:7,18:25:25.90:402,26,0	1/1:12,47:58:75.80:1397,76,0	1/1:17,45:62:99:1819,115,0	1/1:17,39:56:99:1738,108,0	0/0:75,0:75:99:0,205,4785	0/0:54,0:54:99:0,141,3223	0/0:41,0:40:99:0,108,2576	1/1:14,14:28:59.61:1078,60,0	0/0:29,0:24:48.15:0,48,1027	0/0:27,0:26:63.22:0,63,1488	1/1:21,69:89:87.08:1503,87,0	0/0:39,0:39:99:0,99,2228	0/1:12,7:19:3.51:334,0,4	1/1:10,38:48:60.19:1005,60,0	0/0:18,0:18:51.11:0,51,1125	0/0:36,0:35:84.21:0,84,1837	0/0:27,0:27:72.23:0,72,1723	0/0:15,0:15:40.65:0,41,873
chr10	5693440	.	TCCAC	T	8370.85	PASS	AB=0.889;AC=16;AF=0.286;AN=56;BaseQRankSum=21.809;DP=1173;FS=4.087;HRun=0;HaplotypeScore=327.4888;InbreedingCoeff=0.1319;MQ=50.64;MQ0=12;MQRankSum=-9.999;QD=14.33;ReadPosRankSum=7.896;VQSLOD=3.5111;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:77,0:77:99:0,180,4334	0/1:26,4:30:56.64:417,0,57	0/0:35,0:10:20.23:0,20,403	0/0:43,0:13:26.25:0,26,687	0/1:21,4:24:8.69:9,0,77	0/1:27,6:33:21.79:478,0,22	0/1:36,5:40:74.39:523,0,74	0/0:27,0:27:72.02:0,72,1033	0/0:45,0:45:99:0,126,2940	1/1:45,10:55:50.97:1207,51,0	0/1:20,5:25:17.96:301,0,18	0/1:61,2:62:99:823,0,99	1/1:51,11:62:59.19:1348,59,0	0/1:50,11:61:80.37:1208,0,80	0/0:76,0:75:99:0,223,5050	0/0:51,0:51:99:0,147,3362	0/0:41,0:40:99:0,117,2763	0/1:35,2:37:82.10:577,0,82	0/0:28,0:26:65.99:0,66,1152	0/0:26,0:26:75.16:0,75,1801	0/1:87,0:85:67.77:672,0,68	0/0:39,0:39:99:0,108,2369	0/1:16,5:21:19.57:231,0,20	1/1:41,3:44:15.93:576,16,0	0/0:19,0:19:57.14:0,57,1265	0/0:32,0:31:63.35:0,63,1816	0/0:30,0:29:83.82:0,84,1929	0/0:20,0:20:54.08:0,54,1181
chr10	5693555	.	T	TCCAC	30744.91	PASS	AB=0.720;AC=42;AF=0.750;AN=56;BaseQRankSum=-11.970;DP=1042;FS=5.533;HRun=0;HaplotypeScore=338.4232;InbreedingCoeff=0.0289;MQ=49.97;MQ0=9;MQRankSum=1.034;QD=32.13;ReadPosRankSum=2.440;VQSLOD=4.1436;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,2:60:4.23:1024,4,0	0/1:18,12:31:46.55:942,0,47	0/0:44,0:30:78.04:0,78,1089	0/0:41,0:31:82.90:0,83,1124	1/1:20,13:33:44.80:870,45,0	0/1:12,10:21:5.70:847,0,6	1/1:23,9:28:6.04:766,6,0	1/1:5,29:33:84.10:1301,84,0	1/1:2,63:69:99:2909,111,0	0/1:32,26:56:79.86:2378,0,80	1/1:9,20:30:9.33:400,9,0	0/1:34,14:49:99:1384,0,219	0/1:35,16:50:99:1352,0,106	0/1:24,16:40:53.43:1248,0,53	1/1:1,59:65:99:2893,111,0	1/1:1,39:42:63.14:1626,63,0	0/1:37,0:37:49.73:50,0,585	0/1:14,9:23:83.06:870,0,83	1/1:5,18:21:57.02:875,57,0	1/1:1,21:25:60.16:1428,60,0	1/1:26,18:44:50.43:1147,50,0	1/1:0,28:28:50.75:1188,51,0	0/1:13,25:37:28.03:619,0,28	1/1:10,10:20:21.07:539,21,0	1/1:1,13:15:24.08:647,24,0	1/1:4,31:37:96.18:1890,96,0	1/1:1,21:22:26.60:710,27,0	0/1:6,17:23:50.71:843,0,51
chr10	5693581	.	ATCTG	A	4363.48	PASS	AB=0.917;AC=16;AF=0.286;AN=56;BaseQRankSum=10.320;DP=965;FS=96.986;HRun=0;HaplotypeScore=392.0113;InbreedingCoeff=0.0696;MQ=49.73;MQ0=9;MQRankSum=-13.277;QD=10.49;ReadPosRankSum=2.240;VQSLOD=1.0963;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:47:62.69:0,63,1336	0/1:28,2:30:99:455,0,161	0/0:45,0:24:61.89:0,62,1193	0/0:42,0:26:49.09:0,49,1166	1/1:26,1:27:2.88:48,3,0	0/1:19,0:18:99:304,0,120	0/1:19,1:16:39.12:102,0,39	0/0:36,0:36:99:0,103,2296	0/0:68,0:68:99:0,120,2649	0/1:50,7:54:99:895,0,339	0/1:25,2:26:44.96:119,0,45	0/1:39,11:49:99:632,0,300	0/1:40,8:48:99:618,0,259	0/1:30,7:37:16.59:613,0,17	0/0:57,0:57:99:0,108,2367	0/0:46,0:46:84.11:0,84,1980	0/0:34,0:34:99:0,102,2486	0/1:17,0:17:69.72:70,0,182	0/0:29,0:25:62.46:0,62,1394	0/0:26,0:25:69.24:0,69,1624	1/1:32,0:32:19.03:171,19,0	0/0:19,0:19:36.12:0,36,731	0/1:31,2:33:41.66:250,0,42	1/1:16,3:19:8.70:87,9,0	0/0:23,0:23:54.19:0,54,1411	0/0:37,0:37:99:0,108,2597	0/0:21,0:20:26.79:0,27,668	0/0:17,0:17:32.92:0,33,461
chr10	5695022	.	T	TATGTATGC	7565.17	PASS	AB=0.943;AC=36;AF=0.643;AN=56;BaseQRankSum=2.234;DP=752;FS=0.000;HRun=0;HaplotypeScore=195.7643;InbreedingCoeff=0.3229;MQ=56.56;MQ0=5;MQRankSum=-2.272;QD=12.03;ReadPosRankSum=1.204;VQSLOD=3.8375;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:22:6.35:51,6,0	1/1:1,1:20:18.95:324,19,0	0/0:6,0:3:5.60:0,6,37	0/0:5,0:4:1.72:0,2,40	1/1:3,0:25:19.31:161,19,0	1/1:1,23:27:18.06:766,18,0	1/1:29,0:29:56.43:579,56,0	0/0:40,0:35:98.95:0,99,876	0/1:20,0:20:24.31:24,0,183	1/1:5,2:42:99:1682,100,0	1/1:1,2:29:25.33:341,25,0	1/1:0,0:30:9.50:277,10,0	1/1:2,1:42:12.01:442,12,0	1/1:2,1:34:15.01:400,15,0	0/1:28,0:28:84:84,0,265	0/1:31,0:31:99:140,0,206	1/1:26,0:26:47.67:554,48,0	1/1:1,0:25:6.02:203,6,0	0/1:18,0:17:99:210,0,175	0/1:35,0:35:99:448,0,300	1/1:34,0:34:41.90:363,42,0	0/1:32,0:32:99:348,0,295	1/1:3,0:33:7.08:64,7,0	0/1:4,1:22:0:0,0,0	0/1:24,0:23:99:104,0,223	0/0:27,0:27:45.11:0,45,940	0/0:34,0:34:80.83:0,81,1176	0/0:11,0:10:27:0,27,379
chr10	5697368	.	TG	T	995.59	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.140;DP=617;FS=0.000;HRun=1;HaplotypeScore=58.1459;InbreedingCoeff=0.9976;MQ=81.77;MQ0=0;MQRankSum=-1.879;QD=33.19;ReadPosRankSum=1.664;VQSLOD=3.3158;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,30:30:78.26:1090,78,0	0/0:11,0:11:33.11:0,33,527	0/0:17,0:17:51.14:0,51,755	0/0:16,0:16:26.84:0,27,616	0/0:20,0:20:60.19:0,60,934	0/0:20,0:20:57.19:0,57,911	0/0:27,0:27:81.28:0,81,1295	0/0:32,0:32:96.33:0,96,1526	0/0:18,0:18:54.18:0,54,863	0/0:30,0:30:90.30:0,90,1419	0/0:13,0:13:39.12:0,39,600	0/0:17,0:17:51.16:0,51,785	0/0:19,0:19:54.18:0,54,856	0/0:28,0:28:84.29:0,84,1343	0/0:24,0:24:72.25:0,72,1144	0/0:32,0:32:96.31:0,96,1512	0/0:34,0:34:99:0,102,1630	0/0:19,0:19:57.19:0,57,903	0/0:25,0:25:75.23:0,75,1134	0/0:15,0:15:45.15:0,45,720	0/0:29,0:29:87.28:0,87,1359	0/0:18,0:18:54.17:0,54,838	0/0:16,0:16:48.15:0,48,734	0/0:26,0:26:78.25:0,78,1222	0/0:18,0:18:51.17:0,51,810	0/0:24,0:24:72.25:0,72,1150	0/0:30,0:30:90.31:0,90,1438	0/0:9,0:9:27.09:0,27,431
chr10	5697640	.	TACACACACACAC	T	2479.84	PASS	AB=0.851;AC=24;AF=0.462;AN=52;BaseQRankSum=4.026;DP=550;FS=7.737;HRun=0;HaplotypeScore=174.7268;InbreedingCoeff=0.5692;MQ=69.92;MQ0=7;MQRankSum=-4.248;QD=9.76;ReadPosRankSum=-0.947;VQSLOD=2.0561;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:30:19.36:0,19,411	1/1:7,3:11:9.03:289,9,0	./.	./.	1/1:14,5:19:0.47:1,0,0	1/1:9,9:17:9.03:308,9,0	1/1:21,9:31:11.56:229,12,0	0/0:27,0:27:11.40:0,11,188	0/0:10,0:17:6.02:0,6,250	1/1:16,3:19:12.04:276,12,0	0/1:16,0:16:1.31:28,0,1	0/1:11,7:18:3.12:396,0,3	1/1:3,5:8:6.06:206,6,0	1/1:10,6:17:12.45:329,12,0	0/0:14,0:23:17.99:0,18,582	0/0:7,0:14:11.80:0,12,514	0/0:19,0:19:25.64:0,26,1121	1/1:12,0:14:8.25:135,8,0	0/0:22,0:22:27.09:0,27,942	0/0:22,0:20:12.02:0,12,150	1/1:31,0:28:2.84:63,3,0	0/0:11,0:20:4.91:0,5,249	1/1:11,3:14:6.02:205,6,0	0/1:13,7:20:13.60:97,0,14	0/0:12,0:21:15.05:0,15,643	0/1:16,1:17:96.78:97,0,114	0/0:10,0:11:15.05:0,15,615	0/0:8,0:9:21.07:0,21,828
chr10	5698533	.	GCACACACA	G	5420.63	PASS	AB=1.000;AC=25;AF=0.481;AN=52;BaseQRankSum=-5.028;DP=682;FS=20.897;HRun=0;HaplotypeScore=149.0854;InbreedingCoeff=0.7152;MQ=54.32;MQ0=45;MQRankSum=2.523;QD=18.01;ReadPosRankSum=5.383;VQSLOD=2.4856;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:27:5.99:0,6,51	1/1:4,0:4:6.01:72,6,0	0/0:52,0:7:2.04:0,2,6	./.	1/1:10,1:11:6.01:97,6,0	1/1:22,6:28:41.91:700,42,0	1/1:28,0:24:41.53:533,42,0	0/0:26,0:22:18.84:0,19,174	0/0:29,0:28:28.67:0,29,423	1/1:4,18:22:46.17:707,46,0	1/1:12,4:14:1.78:7,2,0	1/1:25,0:23:37.88:490,38,0	1/1:20,1:21:41.97:562,42,0	1/1:25,4:26:47.17:705,47,0	0/1:35,0:35:40.19:40,0,119	0/0:23,0:23:14.36:0,14,207	0/0:32,0:28:15.01:0,15,274	1/1:14,1:15:19.03:355,19,0	0/0:7,0:10:3.30:0,3,33	0/0:20,0:20:12.20:0,12,113	1/1:33,0:31:38.97:553,39,0	0/0:22,0:22:17.37:0,17,299	./.	1/1:31,1:29:1.55:600,2,0	0/0:10,0:11:5.20:0,5,15	0/0:16,0:15:10.71:0,11,169	0/0:29,0:27:21.46:0,21,682	0/0:10,0:8:5.91:0,6,81
chr10	5698552	.	C	CACACAT	592	PASS	AB=0.926;AC=8;AF=0.148;AN=54;BaseQRankSum=-3.173;DP=666;FS=2.348;HRun=0;HaplotypeScore=164.8658;InbreedingCoeff=0.2337;MQ=47.26;MQ0=48;MQRankSum=2.977;QD=4.45;ReadPosRankSum=-0.430;VQSLOD=2.5352;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:26:5.61:0,6,57	0/1:2,0:2:0.01:0,0,0	0/0:31,0:1:1.55:0,2,4	./.	0/0:16,0:15:5.99:0,6,65	0/0:27,0:26:32.93:0,33,390	0/0:27,0:22:35.47:0,35,269	0/0:32,0:26:47.28:0,47,347	0/1:22,0:21:33.07:227,0,33	0/0:20,0:20:36.48:0,36,303	0/0:18,0:16:2.79:0,3,24	0/0:26,0:24:27.72:0,28,229	0/0:22,0:22:31.17:0,31,220	0/0:25,0:22:47.42:0,47,410	0/1:8,27:37:40.12:74,0,40	0/0:13,9:24:7.63:0,8,55	0/0:39,0:33:14.82:0,15,165	0/0:21,0:21:12.98:0,13,321	0/1:18,0:16:56.02:56,0,79	1/1:22,0:22:29.27:245,29,0	0/0:34,0:32:30.14:0,30,229	0/1:21,0:21:10.74:114,0,11	0/1:10,0:10:0:0,0,0	0/0:30,0:27:28.96:0,29,249	0/0:3,9:13:4.61:0,5,16	0/0:17,0:16:41.13:0,41,325	0/0:25,0:22:36.19:0,36,472	0/0:13,0:11:5.95:0,6,75
chr10	5698560	.	CAT	C	5089.35	PASS	AB=0.853;AC=47;AF=0.904;AN=52;BaseQRankSum=1.227;DP=627;FS=2.076;HRun=0;HaplotypeScore=122.8986;InbreedingCoeff=-0.1570;MQ=47.82;MQ0=42;MQRankSum=6.393;QD=8.58;ReadPosRankSum=0.997;VQSLOD=4.7586;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,26:27:3.01:36,3,0	1/1:2,0:2:5.98:47,6,0	./.	./.	1/1:5,14:18:2.92:17,3,0	1/1:28,0:27:44.26:374,44,0	1/1:26,0:21:38.60:307,39,0	0/1:19,10:22:72.62:170,0,73	1/1:21,0:20:10.96:213,11,0	1/1:24,0:23:44.57:413,45,0	1/1:19,0:17:2.86:24,3,0	1/1:25,0:23:40.40:321,40,0	1/1:21,0:20:44.18:315,44,0	1/1:26,0:23:36.01:289,36,0	1/1:32,0:31:11.34:97,11,0	0/1:23,0:23:10.92:74,0,11	0/1:8,30:32:3.33:164,0,3	1/1:25,0:25:33.32:392,33,0	0/1:18,0:15:43.88:60,0,44	1/1:23,0:23:30.95:224,31,0	1/1:38,0:36:59.89:489,60,0	1/1:21,0:21:1.43:123,1,0	1/1:13,0:13:2.73:24,3,0	1/1:25,0:22:30.31:249,30,0	1/1:9,0:9:2.75:42,3,0	1/1:19,0:18:34.30:376,34,0	0/1:25,1:23:16.47:187,0,16	1/1:4,9:11:5.97:64,6,0
chr10	5698562	.	TACACACACAC	T	3467.97	PASS	AB=0.888;AC=28;AF=0.538;AN=52;BaseQRankSum=-4.661;DP=625;FS=5.677;HRun=0;HaplotypeScore=183.9346;InbreedingCoeff=0.5724;MQ=48.14;MQ0=40;MQRankSum=0.412;QD=9.37;ReadPosRankSum=-3.669;VQSLOD=1.6679;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:27:3.01:0,3,66	1/1:2,0:2:5.61:51,6,0	./.	./.	1/1:17,1:17:3.01:85,3,0	1/1:19,6:26:23.63:522,24,0	1/1:25,0:20:10.43:96,10,0	1/1:32,0:25:9.46:140,9,0	0/0:20,0:19:22.32:0,22,629	1/1:22,2:23:18.06:383,18,0	0/1:6,14:18:0.02:0,0,0	1/1:26,0:24:8.74:210,9,0	1/1:19,1:19:18.05:275,18,0	1/1:20,4:22:26.67:554,27,0	0/0:33,0:31:12.84:0,13,191	0/0:23,0:23:13.12:0,13,314	0/0:39,0:33:15.05:0,15,342	1/1:25,1:26:42.19:497,42,0	0/0:19,0:16:11.65:0,12,82	0/0:24,0:24:10.58:0,11,206	1/1:37,0:35:26.51:339,27,0	0/0:21,0:21:6.45:0,6,273	1/1:13,2:15:8.02:54,8,0	0/1:25,1:23:26.22:144,0,26	0/0:9,0:9:7.32:0,7,56	0/1:20,0:19:64.24:64,0,291	0/1:27,0:24:55.90:56,0,737	0/0:12,0:11:5.97:0,6,80
chr10	5699135	.	AG	A	908.98	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.473;DP=739;FS=0.000;HRun=3;HaplotypeScore=79.6014;InbreedingCoeff=0.8529;MQ=70.68;MQ0=4;MQRankSum=0.880;QD=29.32;ReadPosRankSum=0.389;VQSLOD=2.9229;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,138,1967	0/0:15,0:15:45.15:0,45,637	0/0:43,1:27:37.07:0,37,769	0/0:69,0:47:3.16:0,3,920	0/0:30,0:30:87.28:0,87,1224	0/0:18,0:18:48.12:0,48,656	0/0:17,0:17:48.04:0,48,641	0/0:30,0:30:87.29:0,87,1232	0/0:28,0:28:81.25:0,81,1139	0/0:30,0:30:87.26:0,87,1210	0/0:29,0:29:81.25:0,81,1112	0/0:25,0:25:75.24:0,75,1049	0/0:28,0:28:81.24:0,81,1111	0/0:21,0:21:63.20:0,63,880	0/0:26,0:26:75.24:0,75,1059	0/0:18,0:18:54.13:0,54,712	1/1:2,29:31:81.25:1004,81,0	0/0:9,0:10:27.98:0,28,386	0/0:17,0:17:45.12:0,45,598	0/0:28,0:28:84.27:0,84,1175	0/0:24,0:24:69.22:0,69,963	0/0:18,0:18:51.16:0,51,715	0/0:23,0:23:66.22:0,66,941	0/0:31,0:31:87.29:0,87,1245	0/0:20,0:20:60.20:0,60,860	0/0:13,0:13:36.12:0,36,514	0/0:31,0:31:84.25:0,84,1175	0/0:14,0:14:42.13:0,42,586
chr10	5700317	.	TA	T	1958.43	PASS	AB=0.836;AC=29;AF=0.518;AN=56;BaseQRankSum=-7.090;DP=438;FS=6.605;HRun=14;HaplotypeScore=69.4915;InbreedingCoeff=0.6560;MQ=78.98;MQ0=5;MQRankSum=0.557;QD=7.80;ReadPosRankSum=-0.464;VQSLOD=2.4546;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,11:17:0.59:110,1,0	0/0:4,0:4:8.65:0,9,46	0/0:32,0:17:32.76:0,33,265	0/0:28,0:14:10.77:0,11,59	0/1:18,4:22:64.37:64,0,161	0/0:12,1:13:17.50:0,17,182	0/1:8,2:11:43.12:43,0,62	1/1:10,17:31:44.78:328,45,0	1/1:3,7:10:8.91:61,9,0	0/0:12,1:14:1.68:0,2,100	0/0:16,0:16:24.64:0,25,151	0/0:11,0:11:26.11:0,26,150	0/1:12,2:14:8.68:9,0,135	0/0:6,0:6:14.41:0,14,81	1/1:6,5:16:22.23:112,22,0	1/1:4,8:13:25.75:170,26,0	0/0:20,0:20:26.46:0,26,349	0/0:20,0:20:29.92:0,30,256	1/1:3,11:15:34.69:230,35,0	1/1:3,12:15:27.60:186,28,0	1/1:0,1:1:2.97:20,3,0	1/1:0,4:5:13.94:88,14,0	0/0:13,0:13:9.47:0,9,127	0/0:9,0:9:17.66:0,18,109	1/1:8,12:22:9.21:191,9,0	1/1:8,12:20:32.57:219,33,0	1/1:5,16:25:21.94:263,22,0	1/1:3,10:14:10.95:68,11,0
chr10	5704509	.	TG	T	271.40	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.017;DP=737;FS=4.005;HRun=1;HaplotypeScore=165.2733;InbreedingCoeff=0.5076;MQ=65.50;MQ0=6;MQRankSum=-1.901;QD=7.98;ReadPosRankSum=-2.196;VQSLOD=0.2470;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:39:72.34:0,72,648	0/0:18,0:18:45.67:0,46,596	0/0:39,0:30:83.49:0,83,1129	0/0:37,1:32:66.34:0,66,1125	0/0:40,0:40:99:0,114,1654	0/0:35,0:34:72.21:0,72,986	0/0:20,0:20:44.36:0,44,596	0/0:28,0:28:57.14:0,57,717	0/0:21,0:21:45.14:0,45,627	0/0:27,0:27:80.85:0,81,1127	0/0:29,0:29:84.24:0,84,1163	0/0:17,0:17:27.09:0,27,391	0/0:20,0:19:51.15:0,51,705	0/0:23,0:23:45.13:0,45,635	0/0:22,0:22:42.13:0,42,587	0/0:19,0:19:42.14:0,42,602	1/1:22,12:34:0.47:346,0,0	0/0:16,0:16:42.10:0,42,590	0/0:29,0:28:81.24:0,81,1191	0/0:30,0:30:84.25:0,84,1204	0/0:19,0:19:39.12:0,39,543	0/0:34,0:34:99:0,101,1334	0/0:16,0:16:42.14:0,42,584	0/0:29,0:29:63.21:0,63,901	0/0:20,0:20:51.16:0,51,713	0/0:28,0:28:16.54:0,17,278	0/0:36,0:36:39.01:0,39,491	0/0:11,0:11:0.77:0,1,40
chr10	5704510	.	G	GT	314.39	PASS	AB=0.956;AC=6;AF=0.107;AN=56;BaseQRankSum=5.478;DP=740;FS=4.231;HRun=3;HaplotypeScore=166.3892;InbreedingCoeff=0.5916;MQ=66.21;MQ0=6;MQRankSum=-2.983;QD=2.86;ReadPosRankSum=1.261;VQSLOD=0.1875;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:28:0,28,124	0/0:17,0:17:38.94:0,39,275	0/0:39,0:30:81.22:0,81,947	0/0:39,0:33:78.06:0,78,898	0/0:40,0:40:99:0,115,1019	0/0:35,0:34:63.54:0,64,440	0/0:20,0:20:38.86:0,39,252	0/0:30,0:30:20.51:0,21,497	0/0:21,0:21:40.75:0,41,247	0/0:29,0:29:80.91:0,81,666	0/0:30,0:30:82.78:0,83,686	0/0:17,0:17:26.47:0,26,181	0/0:20,0:19:40.39:0,40,252	0/0:23,0:23:41.15:0,41,296	0/0:23,0:23:38.10:0,38,243	0/0:19,0:19:38.02:0,38,225	1/1:19,16:35:8.74:169,9,0	0/0:16,0:16:38.32:0,38,317	0/0:29,0:28:80.11:0,80,807	0/0:28,0:28:76.54:0,77,718	0/0:18,0:18:35.15:0,35,253	0/0:34,0:34:93.76:0,94,818	0/0:16,0:16:40.87:0,41,276	0/0:29,0:29:61.48:0,61,434	0/0:19,0:19:46.79:0,47,291	0/1:27,1:28:99:131,0,110	0/1:33,1:36:92.86:93,0,158	1/1:11,0:11:17.65:52,18,0
chr10	5704513	.	TG	T	2330.70	PASS	AB=0.693;AC=9;AF=0.161;AN=56;BaseQRankSum=0.346;DP=736;FS=5.299;HRun=1;HaplotypeScore=157.9360;InbreedingCoeff=0.6024;MQ=70.65;MQ0=6;MQRankSum=-4.742;QD=13.55;ReadPosRankSum=1.507;VQSLOD=3.0585;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:18,23:41:89.96:826,90,0	0/0:17,0:17:44.28:0,44,532	0/0:40,0:31:86.04:0,86,1095	0/0:41,0:35:86.04:0,86,1165	0/0:42,0:42:99:0,123,1742	0/0:33,0:32:66.22:0,66,935	0/0:20,0:20:44.18:0,44,596	0/1:21,7:28:73.54:74,0,248	0/0:22,0:22:42.09:0,42,537	0/0:28,0:28:83.86:0,84,1167	0/0:29,0:29:84.28:0,84,1236	0/0:18,0:18:27.07:0,27,372	0/0:17,0:16:42.13:0,42,576	0/0:23,0:23:42.14:0,42,611	0/0:22,0:22:39.13:0,39,563	0/0:20,0:20:39.13:0,39,560	1/1:20,12:32:50.96:413,51,0	0/0:15,0:15:39.11:0,39,550	0/0:30,0:29:87.24:0,87,1209	0/0:28,0:28:78.25:0,78,1147	0/0:19,0:19:36.10:0,36,478	0/0:36,0:36:99:0,104,1389	0/0:16,0:16:41.61:0,42,540	0/0:29,0:29:63.10:0,63,845	0/0:19,0:19:48.16:0,48,687	0/1:13,15:28:46.23:486,0,46	0/1:13,18:32:42.72:437,0,43	1/1:1,10:11:29.97:253,30,0
chr10	5704515	.	TTTG	T	3143.69	PASS	AB=0.691;AC=9;AF=0.161;AN=56;BaseQRankSum=-1.006;DP=725;FS=3.543;HRun=0;HaplotypeScore=178.0674;InbreedingCoeff=0.6021;MQ=72.80;MQ0=6;MQRankSum=-6.691;QD=18.38;ReadPosRankSum=1.821;VQSLOD=3.7409;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:41,0:41:75.45:1232,75,0	0/0:15,0:15:24.05:0,24,415	0/0:37,0:30:81.19:0,81,1021	0/0:40,0:34:73.07:0,73,1347	0/0:42,0:42:99:0,114,1431	0/0:34,0:33:63.18:0,63,808	0/0:21,0:21:45.09:0,45,571	0/1:22,7:29:99:138,0,184	0/0:19,0:19:33.11:0,33,434	0/0:28,0:28:82.77:0,83,977	0/0:29,0:29:84.27:0,84,1124	0/0:17,0:17:24.06:0,24,300	0/0:16,0:15:39.13:0,39,512	0/0:23,0:23:42.11:0,42,531	0/0:22,0:22:39.11:0,39,497	0/0:20,0:20:39.13:0,39,511	1/1:31,0:31:29.24:485,29,0	0/0:14,0:14:36.10:0,36,512	0/0:27,0:26:74.99:0,75,844	0/0:30,0:30:81.21:0,81,990	0/0:19,0:19:33.08:0,33,415	0/0:35,0:35:99:0,102,1249	0/0:16,0:16:22.94:0,23,451	0/0:30,0:30:51.16:0,51,694	0/0:20,0:20:45.15:0,45,590	0/1:11,15:26:36.16:540,0,36	0/1:14,19:33:22.21:577,0,22	1/1:1,10:11:30.08:331,30,0
chr10	5704516	.	TTG	T	2444.17	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=0.009;DP=717;FS=3.470;HRun=0;HaplotypeScore=168.0269;InbreedingCoeff=0.6014;MQ=73.04;MQ0=6;MQRankSum=-6.342;QD=14.46;ReadPosRankSum=1.112;VQSLOD=3.7268;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:18,23:41:72.89:826,73,0	0/0:16,0:16:25.96:0,26,274	0/0:35,0:28:81.25:0,81,1124	0/0:39,0:33:43.80:0,44,1252	0/0:41,0:41:99:0,114,1064	0/0:34,0:33:62.92:0,63,528	0/0:21,0:21:44.46:0,44,374	0/1:29,0:29:99:100,0,233	0/0:19,0:19:32.97:0,33,281	0/0:28,0:28:82.18:0,82,696	0/0:30,0:30:75.73:0,76,798	0/0:17,0:17:23.97:0,24,202	0/0:17,0:16:38.96:0,39,330	0/0:23,0:23:41.97:0,42,373	0/0:22,0:22:38.96:0,39,329	0/0:20,0:20:38.96:0,39,329	1/1:29,0:29:42.93:421,43,0	0/0:14,0:14:36.01:0,36,360	0/0:26,0:25:74.62:0,75,644	0/0:29,0:29:80.76:0,81,730	0/0:18,0:18:32.95:0,33,276	0/0:35,0:35:99:0,101,948	0/0:15,0:15:22.61:0,23,303	0/0:29,0:29:50.95:0,51,456	0/0:20,0:20:44.95:0,45,380	0/1:26,0:26:34.02:470,0,34	0/1:33,0:33:40.65:495,0,41	1/1:11,0:11:30.05:291,30,0
chr10	5704517	.	TG	T	2165.32	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=-0.014;DP=708;FS=3.334;HRun=1;HaplotypeScore=156.0717;InbreedingCoeff=0.8776;MQ=74.69;MQ0=5;MQRankSum=-5.930;QD=13.53;ReadPosRankSum=0.336;VQSLOD=2.9400;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:39,0:39:83.47:771,83,0	0/0:16,0:16:28.24:0,28,163	0/0:34,0:28:81.13:0,81,1024	0/0:37,0:33:73.43:0,73,1145	0/0:40,0:40:97.84:0,98,515	0/0:33,0:32:58.57:0,59,296	0/0:21,1:22:37.63:0,38,198	0/1:28,0:28:90.51:91,0,98	0/0:19,0:19:30.29:0,30,131	0/0:28,0:28:53:0,53,311	0/0:31,0:31:66.71:0,67,440	0/0:18,0:18:22.21:0,22,107	0/0:17,0:16:35.48:0,35,151	0/0:23,0:23:39.18:0,39,203	0/0:24,0:24:35.93:0,36,165	0/0:20,0:20:35.68:0,36,152	1/1:18,10:28:49.22:391,49,0	0/0:14,0:14:34.23:0,34,242	0/0:26,0:25:64.49:0,64,372	0/0:29,0:29:77.09:0,77,471	0/0:18,0:18:30.43:0,30,139	0/0:35,0:35:96.61:0,97,530	0/0:15,0:15:18.44:0,18,150	0/0:27,0:27:46.92:0,47,231	0/0:22,0:22:41.17:0,41,175	1/1:25,0:25:13.09:401,13,0	1/1:30,0:30:21.47:450,21,0	1/1:10,0:10:29.92:238,30,0
chr10	5704518	.	G	GTTTT	23372.53	PASS	AB=0.987;AC=47;AF=0.839;AN=56;BaseQRankSum=-13.788;DP=723;FS=5.100;HRun=4;HaplotypeScore=125.2214;InbreedingCoeff=0.5470;MQ=75.22;MQ0=5;MQRankSum=-0.733;QD=36.41;ReadPosRankSum=3.048;VQSLOD=1.8512;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:37,0:37:40.04:166,0,40	1/1:1,14:15:30.06:737,30,0	0/0:34,0:29:64.27:0,64,771	0/0:37,0:33:72.80:0,73,1012	1/1:2,40:42:98.37:1884,98,0	1/1:3,29:31:51.18:1356,51,0	1/1:2,19:22:42.14:1074,42,0	1/1:28,0:28:17.01:449,17,0	1/1:1,20:21:33.11:875,33,0	1/1:3,26:30:81.10:1559,81,0	1/1:4,29:33:86.78:1591,87,0	1/1:1,17:19:21.07:559,21,0	1/1:1,16:18:15.73:934,16,0	1/1:2,21:24:33.11:878,33,0	1/1:0,23:24:36.12:958,36,0	1/1:0,20:20:39.13:1038,39,0	1/1:28,0:28:2.54:146,3,0	1/1:5,9:14:30.10:758,30,0	1/1:6,20:25:66.06:1115,66,0	1/1:3,26:30:74.83:1219,75,0	1/1:0,16:18:30.10:777,30,0	1/1:3,33:38:92.56:1470,93,0	1/1:1,14:15:32.02:887,32,0	1/1:3,26:29:51.18:1356,51,0	1/1:0,22:22:45.15:1198,45,0	0/1:24,1:25:30.17:194,0,30	0/1:31,0:31:30.77:195,0,31	0/0:10,0:10:9.58:0,10,20
chr10	5706255	.	TAA	T	5831.46	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=4.748;DP=761;FS=3.138;HRun=2;HaplotypeScore=133.9092;InbreedingCoeff=0.9996;MQ=82.82;MQ0=0;MQRankSum=-2.563;QD=45.56;ReadPosRankSum=-0.719;VQSLOD=4.4359;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,37:37:99:1615,99,0	0/0:9,0:9:27.09:0,27,548	0/0:23,0:23:66.17:0,66,1191	0/0:22,0:22:63.13:0,63,1118	0/0:30,0:30:90.31:0,90,1829	0/0:22,0:22:66.21:0,66,1282	0/0:33,0:33:99:0,99,1966	1/1:0,30:30:90.31:1460,90,0	0/0:26,0:26:78.27:0,78,1573	0/0:36,0:36:99:0,108,2189	0/0:24,0:24:72.25:0,72,1461	0/0:28,0:28:84.29:0,84,1682	0/0:20,0:20:60.21:0,60,1210	0/0:37,0:37:99:0,111,2179	0/0:36,0:36:99:0,108,2122	0/0:33,0:33:99:0,99,1991	0/0:32,0:32:96.33:0,96,1951	0/0:30,0:30:87.30:0,87,1768	0/0:24,0:24:72.25:0,72,1452	0/0:25,0:25:72.22:0,72,1381	0/0:33,0:33:99:0,99,1989	0/0:25,0:25:72.25:0,72,1457	0/0:18,0:18:54.19:0,54,1097	0/0:33,0:33:99:0,99,1961	0/0:34,0:34:99:0,102,2071	1/1:0,30:30:90.29:1436,90,0	1/1:0,21:21:51.15:832,51,0	1/1:0,10:10:30.10:489,30,0
chr10	5706640	.	A	AG	346.09	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.252;DP=657;FS=13.023;HRun=1;HaplotypeScore=104.2587;InbreedingCoeff=0.9967;MQ=76.99;MQ0=1;MQRankSum=-5.344;QD=28.84;ReadPosRankSum=1.809;VQSLOD=2.2607;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,126,1728	0/0:10,0:10:30.10:0,30,416	0/0:50,0:49:99:0,138,1831	0/0:22,0:20:56.69:0,57,725	0/0:24,0:24:72.22:0,72,988	0/0:18,0:18:54.18:0,54,752	0/0:22,0:22:66.22:0,66,919	0/0:37,0:37:99:0,111,1519	0/0:19,0:19:57.19:0,57,795	0/0:35,0:35:99:0,102,1409	0/0:17,0:17:48.16:0,48,671	0/0:25,0:25:75.25:0,75,1046	0/0:15,0:15:42.13:0,42,570	0/0:24,0:24:72.22:0,72,989	0/0:19,0:19:57.16:0,57,762	0/0:22,0:22:66.21:0,66,905	1/1:1,11:12:30.10:441,30,0	0/0:24,0:24:69.23:0,69,959	0/0:28,0:28:84.27:0,84,1154	0/0:16,0:16:48.15:0,48,654	0/0:28,0:28:84.26:0,84,1154	0/0:25,0:25:72.22:0,72,976	0/0:11,0:11:33.11:0,33,461	0/0:16,0:16:48.16:0,48,671	0/0:40,0:40:99:0,120,1633	0/0:24,0:24:72.24:0,72,1006	0/0:19,0:19:54.18:0,54,754	0/0:8,0:8:24.08:0,24,336
chr10	5706643	.	G	GC	270.86	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.276;DP=651;FS=12.854;HRun=0;HaplotypeScore=102.6394;InbreedingCoeff=0.9967;MQ=78.64;MQ0=0;MQRankSum=-5.371;QD=24.62;ReadPosRankSum=1.471;VQSLOD=3.8598;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,129,1743	0/0:10,0:10:30.10:0,30,419	0/0:49,0:48:99:0,138,1868	0/0:21,0:19:56.84:0,57,684	0/0:23,0:23:69.23:0,69,960	0/0:18,0:18:54.16:0,54,737	0/0:21,0:21:63.18:0,63,847	0/0:36,0:36:99:0,108,1493	0/0:21,0:21:60.19:0,60,823	0/0:36,0:36:99:0,108,1496	0/0:19,0:19:54.17:0,54,734	0/0:25,0:25:75.25:0,75,1049	0/0:15,0:15:45.15:0,45,629	0/0:25,0:25:75.24:0,75,1030	0/0:18,0:18:51.17:0,51,713	0/0:20,0:20:60.20:0,60,839	1/1:0,11:11:30.09:365,30,0	0/0:24,0:24:69.20:0,69,944	0/0:26,0:26:78.25:0,78,1074	0/0:15,0:15:45.15:0,45,624	0/0:31,0:31:90.25:0,90,1204	0/0:23,0:23:63.21:0,63,878	0/0:11,0:11:33.10:0,33,444	0/0:18,0:18:51.13:0,51,690	0/0:35,0:35:99:0,102,1403	0/0:24,0:24:72.23:0,72,991	0/0:20,0:20:60.17:0,60,802	0/0:8,0:8:24.08:0,24,336
chr10	5709090	.	TGTGTGTGTGTGTGTGA	T	223.07	PASS	AB=0.811;AC=2;AF=0.036;AN=56;BaseQRankSum=5.466;DP=627;FS=12.884;HRun=0;HaplotypeScore=280.2870;InbreedingCoeff=-0.0364;MQ=47.41;MQ0=18;MQRankSum=-4.706;QD=4.46;ReadPosRankSum=-4.829;VQSLOD=0.5697;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:46:88.50:0,89,3797	0/0:7,0:5:8.47:0,8,496	0/0:16,0:8:17.93:0,18,407	0/0:16,0:7:20.73:0,21,737	0/0:18,0:17:30.09:0,30,1458	0/0:23,0:23:38.74:0,39,1812	0/0:26,0:26:35.63:0,36,1898	0/0:30,0:28:74.57:0,75,2510	0/0:37,0:37:58.56:0,59,3556	0/0:21,0:17:51.17:0,51,2061	0/0:17,0:16:29.22:0,29,1375	0/0:19,0:18:43.39:0,43,2034	0/0:22,0:21:26.89:0,27,1905	0/0:21,0:21:21.20:0,21,870	0/0:36,0:35:55.94:0,56,2633	0/0:22,0:22:42.59:0,43,1943	0/1:9,14:23:80.90:297,0,81	0/0:13,0:11:18.50:0,18,847	0/0:19,0:18:48.15:0,48,1631	0/0:9,0:9:15.40:0,15,569	0/0:45,0:45:84.08:0,84,3812	0/0:13,0:13:27.08:0,27,1064	0/0:13,0:11:8.50:0,9,519	0/0:35,0:35:38.83:0,39,2010	0/0:15,0:15:30.10:0,30,993	0/0:20,0:19:43.88:0,44,2081	0/1:27,0:26:2.44:2,0,1545	0/0:15,0:14:32.89:0,33,1024
chr10	5709104	.	TGAGAGAGAGA	T	2713.84	PASS	AB=0.925;AC=25;AF=0.500;AN=50;BaseQRankSum=4.497;DP=554;FS=25.676;HRun=0;HaplotypeScore=198.9398;InbreedingCoeff=0.0279;MQ=44.94;MQ0=18;MQRankSum=-4.201;QD=8.20;ReadPosRankSum=1.060;VQSLOD=1.0018;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:43:60.58:0,61,1984	0/0:8,0:6:5.90:0,6,41	./.	./.	0/0:18,0:17:2.96:0,3,19	0/1:23,0:23:8.49:139,0,8	0/0:26,0:25:1.89:0,2,17	0/1:17,0:16:9.51:27,0,10	1/1:35,0:35:18.03:322,18,0	0/1:20,0:16:84.46:386,0,84	0/0:16,0:15:4.78:0,5,17	0/1:19,0:18:46.84:47,0,96	0/1:26,0:25:54.39:54,0,76	1/1:20,0:20:0.20:0,1,0	1/1:36,0:34:9.82:459,10,0	0/1:20,0:20:25.69:89,0,26	0/0:23,0:23:19.57:0,20,719	./.	1/1:15,0:14:0.03:318,0,0	1/1:8,0:8:2.73:18,3,0	0/0:33,0:33:5.91:0,6,44	1/1:10,0:10:8.99:128,9,0	1/1:14,0:12:0.47:1,0,0	0/0:37,0:37:6.92:0,7,48	1/1:10,0:10:6.01:103,6,0	0/1:13,1:19:21.68:374,0,22	0/1:11,12:23:9.42:230,0,9	0/1:13,1:13:38.24:168,0,38
chr10	5709127	.	GAGAGAGAGAGAGAGAA	G	794.81	PASS	AB=0.994;AC=14;AF=0.250;AN=56;BaseQRankSum=2.041;DP=563;FS=7.863;HRun=0;HaplotypeScore=233.9903;InbreedingCoeff=0.0152;MQ=46.96;MQ0=23;MQRankSum=0.659;QD=3.66;ReadPosRankSum=1.432;VQSLOD=1.3395;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:49:88.76:0,89,3966	0/0:11,0:8:3.84:0,4,21	0/0:11,0:2:3.01:0,3,68	0/0:27,0:12:22.03:0,22,298	0/1:11,0:10:12.01:12,0,15	0/1:16,1:17:11.14:66,0,11	1/1:22,0:21:4.77:149,5,0	0/0:16,0:15:29.99:0,30,468	0/0:28,0:28:47.65:0,48,514	0/1:18,0:15:42.06:251,0,42	0/1:12,0:11:42.70:52,0,43	0/1:29,0:28:72.30:79,0,72	0/1:26,0:25:36.09:58,0,36	0/1:21,0:21:1.53:130,0,2	0/0:37,0:35:27.59:0,28,492	0/0:19,0:19:47.99:0,48,537	0/0:26,0:26:38.09:0,38,1581	0/1:8,0:7:8.03:58,0,8	0/1:10,0:9:26.28:26,0,153	0/0:11,0:11:22.74:0,23,217	0/0:14,19:33:0.79:0,1,2	0/0:7,0:7:14.26:0,14,91	1/1:12,0:10:0.47:1,0,0	0/1:31,0:31:9.67:57,0,10	0/0:13,0:13:29.73:0,30,326	0/0:18,0:17:35.15:0,35,302	0/0:25,0:24:9.87:0,10,358	0/0:13,0:11:23.09:0,23,291
chr10	5709129	.	GAGAGAGAGAGAGAA	G	1484.51	PASS	AB=0.991;AC=26;AF=0.464;AN=56;BaseQRankSum=3.079;DP=569;FS=5.519;HRun=0;HaplotypeScore=221.4008;InbreedingCoeff=0.1726;MQ=48.20;MQ0=22;MQRankSum=0.026;QD=4.25;ReadPosRankSum=3.856;VQSLOD=2.1856;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:50:88.80:0,89,3478	0/0:11,0:8:0.47:0,0,1	0/0:14,0:3:5.91:0,6,61	0/0:28,0:12:26.73:0,27,262	1/1:11,0:10:1.15:15,1,0	0/1:15,1:16:6.30:140,0,6	1/1:22,0:21:20.73:167,21,0	0/0:19,0:18:38.69:0,39,426	0/0:26,0:26:9.94:0,10,342	0/1:18,0:15:8.08:499,0,8	1/1:11,1:11:3.68:79,4,0	0/1:27,1:27:21.06:114,0,21	1/1:26,0:25:1.23:83,1,0	1/1:18,2:20:14.46:170,14,0	0/1:39,0:37:59.55:60,0,407	0/0:20,0:20:32.71:0,33,403	0/0:26,0:26:39.03:0,39,1401	1/1:5,0:5:8.42:69,8,0	0/1:11,0:10:88.18:88,0,103	0/0:10,0:10:21.90:0,22,169	1/1:33,0:33:2.32:22,2,0	0/1:7,0:7:1.85:2,0,48	1/1:6,7:11:0.94:2,1,0	0/1:31,0:31:5.22:78,0,5	0/0:14,0:14:29.47:0,29,287	0/1:18,0:17:26.64:27,0,138	0/1:26,0:25:32.03:32,0,304	0/1:13,0:11:3.77:4,0,141
chr10	5709130	.	AGAGAGAGAG	A	1738.85	PASS	AB=0.917;AC=18;AF=0.321;AN=56;BaseQRankSum=8.934;DP=575;FS=13.711;HRun=0;HaplotypeScore=193.2956;InbreedingCoeff=-0.2408;MQ=48.51;MQ0=21;MQRankSum=-3.645;QD=5.63;ReadPosRankSum=4.947;VQSLOD=1.5505;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:49:97.09:0,97,2873	0/0:11,0:8:6.02:0,6,97	0/0:14,0:3:6.01:0,6,64	0/0:29,0:13:26.55:0,27,327	0/0:11,0:10:6.02:0,6,85	0/1:16,0:16:63.41:63,0,102	0/0:22,0:21:25.81:0,26,342	0/0:20,0:19:53.28:0,53,553	0/1:16,10:27:30.44:344,0,30	0/1:17,0:15:99:182,0,368	0/0:12,0:11:18.06:0,18,241	0/1:28,0:27:30.31:30,0,340	0/1:25,0:24:19:19,0,258	0/1:22,0:22:2.20:2,0,238	0/1:26,12:36:99:499,0,128	0/1:20,2:22:36.67:37,0,196	0/0:26,0:26:42.12:0,42,1192	0/0:6,0:6:15.05:0,15,188	0/1:10,2:11:86.56:227,0,87	0/1:8,2:10:23.09:30,0,23	0/0:33,0:33:9.12:0,9,113	1/1:3,4:7:7.41:74,7,0	1/1:13,0:11:0.90:1,1,0	0/0:31,0:31:17.92:0,18,259	0/1:11,5:16:33.87:95,0,34	0/1:17,0:16:99:147,0,273	0/1:26,0:25:80.75:81,0,433	0/1:13,0:11:62.40:62,0,218
chr10	5709131	.	GAGAGAGAGAGAA	G	2611.02	PASS	AB=0.961;AC=33;AF=0.589;AN=56;BaseQRankSum=2.304;DP=578;FS=0.527;HRun=0;HaplotypeScore=208.7844;InbreedingCoeff=0.2730;MQ=48.60;MQ0=21;MQRankSum=-1.251;QD=6.38;ReadPosRankSum=5.941;VQSLOD=1.9907;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:49:88.37:0,88,2985	0/1:5,6:8:0.18:0,0,0	0/0:14,0:3:5.89:0,6,39	0/0:30,0:13:29.59:0,30,268	1/1:3,8:10:5.87:35,6,0	1/1:11,5:16:9.90:193,10,0	1/1:19,3:21:24.78:187,25,0	0/0:21,0:20:31.06:0,31,351	0/1:28,0:28:81.67:82,0,344	1/1:9,8:15:30.02:677,30,0	1/1:11,1:11:13.27:94,13,0	1/1:8,19:26:8.70:125,9,0	1/1:11,14:24:5.55:123,6,0	1/1:19,3:22:24.52:264,25,0	0/1:38,0:36:99:242,0,330	0/1:22,0:22:33.73:34,0,316	0/0:27,0:27:41.97:0,42,1261	1/1:6,0:6:14.91:113,15,0	0/1:12,0:11:91.65:190,0,92	0/0:10,0:10:21.90:0,22,147	1/1:33,0:33:3.07:47,3,0	0/1:7,0:7:24.49:24,0,48	1/1:11,2:11:0.94:1,1,0	1/1:28,3:31:11.30:92,11,0	0/0:16,0:16:12.87:0,13,249	0/1:18,0:17:70.32:142,0,70	0/1:26,0:25:95.22:95,0,254	0/1:12,0:10:36.11:36,0,53
chr10	5709133	.	GAGAGAGAGAA	G	3213.92	PASS	AB=1.000;AC=37;AF=0.661;AN=56;BaseQRankSum=1.804;DP=572;FS=0.000;HRun=0;HaplotypeScore=193.5502;InbreedingCoeff=0.2075;MQ=50.01;MQ0=20;MQRankSum=-1.398;QD=7.30;ReadPosRankSum=6.188;VQSLOD=1.5700;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:48:88.30:0,88,2527	1/1:11,0:8:0.14:1,0,0	0/0:15,0:4:8.85:0,9,57	0/0:31,0:13:28.73:0,29,261	1/1:11,0:10:5.87:35,6,0	1/1:13,2:15:12.90:227,13,0	1/1:22,0:21:27.66:212,28,0	0/1:19,0:18:3.29:3,0,262	0/1:28,0:28:99:226,0,300	1/1:15,2:15:30.02:632,30,0	1/1:12,0:11:17.67:124,18,0	1/1:27,0:26:8.56:111,9,0	1/1:21,0:20:5.76:105,6,0	1/1:20,2:22:24.65:240,25,0	0/1:40,0:38:99:373,0,333	0/1:22,0:22:50.92:51,0,256	0/0:26,0:26:44.88:0,45,1120	1/1:6,0:6:14.91:113,15,0	0/1:11,0:10:77.09:214,0,77	0/0:10,0:10:21.90:0,22,146	1/1:33,0:33:2.66:25,3,0	0/1:7,0:7:47.95:62,0,48	1/1:12,0:11:0.94:1,1,0	1/1:30,0:30:13.75:118,14,0	0/1:16,0:16:49.72:50,0,210	0/1:18,0:17:76.78:218,0,77	0/1:28,0:27:99:140,0,302	1/1:12,0:10:8.34:110,8,0
chr10	5709141	.	GAA	G	1257.66	PASS	AB=1.000;AC=26;AF=0.464;AN=56;BaseQRankSum=-0.092;DP=534;FS=7.584;HRun=3;HaplotypeScore=143.0986;InbreedingCoeff=0.6648;MQ=54.59;MQ0=16;MQRankSum=0.435;QD=5.80;ReadPosRankSum=0.637;VQSLOD=-0.1787;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:44:59.76:0,60,944	0/0:8,0:6:0:0,0,0	0/0:18,0:5:8.85:0,9,58	0/0:36,0:15:12.43:0,12,299	1/1:9,0:8:5.87:35,6,0	1/1:14,0:14:14.87:107,15,0	1/1:21,0:20:38.85:311,39,0	0/0:24,0:24:39.60:0,40,494	0/0:26,4:30:50.95:0,51,526	1/1:12,0:11:29.79:218,30,0	1/1:9,0:8:17.86:135,18,0	1/1:23,0:22:9.33:57,9,0	1/1:15,0:15:5.84:37,6,0	1/1:19,0:19:26.90:217,27,0	0/0:36,0:34:14.51:0,15,491	0/0:23,0:23:5.62:0,6,336	0/0:28,0:28:52.22:0,52,557	1/1:7,0:7:17.89:135,18,0	0/1:12,0:11:3.91:4,0,121	0/0:8,0:8:18.33:0,18,134	1/1:25,0:25:3:25,3,0	0/1:5,0:5:5.75:6,0,48	0/1:10,0:9:0.26:0,0,0	1/1:24,0:24:17.23:144,17,0	0/0:17,0:17:18.74:0,19,298	0/0:17,0:16:9.24:0,9,167	0/0:27,0:26:49.96:0,50,410	0/1:12,0:11:24.01:24,0,28
chr10	5710108	.	TCACACA	T	97.06	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-0.204;DP=639;FS=12.869;HRun=0;HaplotypeScore=182.3326;InbreedingCoeff=0.4188;MQ=64.44;MQ0=13;MQRankSum=-0.985;QD=2.07;ReadPosRankSum=1.833;VQSLOD=1.9964;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,17:30:11.83:182,12,0	0/0:3,0:3:3:0,3,27	0/0:57,0:28:22.51:0,23,282	0/0:55,0:32:22.96:0,23,285	1/1:17,0:17:0.31:1,0,0	0/0:16,0:16:5.50:0,5,49	0/0:35,0:34:27.41:0,27,439	0/0:29,0:29:42.96:0,43,755	0/0:21,0:22:21.51:0,22,405	0/0:30,0:30:46.96:0,47,1250	0/0:13,0:13:6.02:0,6,100	0/0:21,0:21:18.53:0,19,457	0/0:22,0:21:23.50:0,24,471	0/0:11,0:11:3.48:0,3,71	0/0:28,0:27:22:0,22,385	0/0:11,0:11:27.07:0,27,556	0/0:26,0:26:36.94:0,37,791	0/0:23,0:23:34.44:0,34,577	0/0:11,0:10:13.26:0,13,222	0/0:20,0:20:8.64:0,9,171	0/0:30,0:29:9.01:0,9,160	0/0:16,0:16:7.97:0,8,183	0/0:23,0:22:8.42:0,8,233	0/0:28,0:27:3.33:0,3,16	0/0:21,0:21:9.03:0,9,179	0/0:22,0:21:16.78:0,17,708	0/0:16,0:15:6.02:0,6,149	0/0:3,0:3:6.02:0,6,144
chr10	5710136	.	TCA	T	2189.84	PASS	AB=0.947;AC=23;AF=0.411;AN=56;BaseQRankSum=-6.909;DP=729;FS=4.085;HRun=0;HaplotypeScore=161.6104;InbreedingCoeff=0.4160;MQ=52.36;MQ0=17;MQRankSum=3.677;QD=6.24;ReadPosRankSum=-0.401;VQSLOD=2.9841;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:7.27:0,7,452	1/1:5,0:5:9.02:102,9,0	0/0:58,0:21:44.96:0,45,530	0/0:55,0:23:3.28:0,3,418	1/1:14,0:13:6.49:75,6,0	1/1:19,0:19:27.06:318,27,0	1/1:33,0:32:11.16:256,11,0	0/1:16,12:28:64.73:357,0,65	0/0:30,0:30:13.28:0,13,65	0/1:28,1:29:99:215,0,108	0/0:14,0:14:10.98:0,11,47	0/0:30,0:30:13.95:0,14,86	0/0:27,0:26:11.13:0,11,73	0/1:20,0:20:0.01:0,0,0	0/0:37,0:36:10.90:0,11,58	0/0:15,0:15:12.60:0,13,56	0/1:31,0:31:18.68:32,0,19	0/0:23,1:24:13.15:0,13,108	1/1:15,0:14:23.17:240,23,0	0/0:28,0:28:14.08:0,14,56	1/1:35,0:34:2.54:10,3,0	1/1:17,0:17:13.07:123,13,0	0/1:22,0:21:0.74:1,0,43	1/1:30,0:29:18.46:208,18,0	0/1:24,0:25:5.69:172,0,6	0/1:27,1:27:99:263,0,107	0/0:16,0:15:2.49:0,2,5	0/0:6,0:6:2.82:0,3,23
chr10	5710138	.	A	ACACACACACACT	6792.50	PASS	AB=0.741;AC=39;AF=0.696;AN=56;BaseQRankSum=-2.303;DP=756;FS=1.759;HRun=0;HaplotypeScore=226.9525;InbreedingCoeff=0.1976;MQ=54.93;MQ0=15;MQRankSum=1.836;QD=11.94;ReadPosRankSum=3.501;VQSLOD=3.8776;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:31.94:0,32,707	1/1:4,0:5:8.24:81,8,0	0/0:56,0:20:41.24:0,41,472	0/0:52,0:24:6.57:0,7,520	1/1:14,0:13:4.87:49,5,0	1/1:20,0:20:28.57:193,29,0	1/1:34,0:33:22.75:472,23,0	1/1:28,0:28:12.24:376,12,0	1/1:8,1:29:15.04:572,15,0	0/1:29,0:29:66.70:336,0,67	0/0:6,7:14:0:0,0,0	0/1:16,13:33:68.25:306,0,68	0/1:19,0:29:45.62:239,0,46	0/0:10,0:27:2.19:0,2,19	1/1:16,1:38:14.96:475,15,0	1/1:3,12:17:24.03:1071,24,0	0/1:6,0:33:22.08:210,0,22	0/1:13,0:29:55.76:154,0,56	1/1:15,0:14:33.38:441,33,0	1/1:9,18:31:4.46:356,4,0	1/1:12,0:34:2.89:78,3,0	1/1:17,0:17:14.49:111,14,0	0/1:21,0:20:5.90:111,0,6	1/1:32,0:31:17.63:184,18,0	1/1:24,0:24:16.04:152,16,0	0/1:11,0:31:14.98:555,0,15	1/1:6,0:15:6.02:182,6,0	1/1:1,0:6:0.22:89,0,0
chr10	5711908	.	AAC	A	3527.09	PASS	AB=0.789;AC=31;AF=0.554;AN=56;BaseQRankSum=6.214;DP=474;FS=2.395;HRun=0;HaplotypeScore=108.8116;InbreedingCoeff=0.5185;MQ=65.35;MQ0=9;MQRankSum=-2.768;QD=13.26;ReadPosRankSum=0.844;VQSLOD=3.2928;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:48.10:0,48,682	1/1:2,2:4:5.99:50,6,0	0/0:43,0:19:5.12:0,5,74	0/0:43,0:22:26.11:0,26,199	0/1:9,9:19:8.81:121,0,9	1/1:6,10:16:20.80:295,21,0	0/1:8,6:14:18.58:79,0,19	1/1:10,13:23:54.17:650,54,0	0/0:12,0:12:24.07:0,24,358	0/1:14,3:17:27.68:90,0,28	1/1:8,8:16:17.77:147,18,0	1/1:3,9:12:20.92:184,21,0	1/1:7,5:12:14.99:147,15,0	1/1:3,5:8:4.97:71,5,0	0/0:15,0:15:18.06:0,18,289	0/0:13,0:13:24.08:0,24,368	1/1:19,10:30:35.76:523,36,0	0/1:11,2:13:1.71:133,0,2	0/0:15,0:15:18.98:0,19,449	0/0:17,0:17:2.82:0,3,479	1/1:9,5:14:15.04:180,15,0	0/1:6,1:7:21.13:21,0,151	1/1:3,14:17:18.07:181,18,0	1/1:12,11:22:24.07:290,24,0	0/0:20,1:21:1.44:0,1,620	1/1:4,7:11:7.50:235,7,0	1/1:7,3:10:11.80:130,12,0	0/0:1,1:1:3:0,3,29
chr10	5711931	.	A	ATG	1723.08	PASS	AB=0.963;AC=14;AF=0.250;AN=56;BaseQRankSum=8.208;DP=484;FS=0.527;HRun=0;HaplotypeScore=122.1835;InbreedingCoeff=-0.0204;MQ=53.03;MQ0=14;MQRankSum=-7.541;QD=10.14;ReadPosRankSum=2.582;VQSLOD=3.2229;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:52.52:0,53,917	1/1:4,0:4:5.27:82,5,0	0/0:35,0:8:20.56:0,21,294	0/0:42,0:16:24.66:0,25,378	0/1:19,2:20:17.38:297,0,17	0/1:23,0:23:99:138,0,149	1/1:16,1:17:8.02:257,8,0	0/0:28,0:28:5.07:0,5,667	0/0:9,0:9:27.09:0,27,436	0/1:15,0:15:95.52:251,0,96	0/1:14,0:14:47.83:145,0,48	0/1:15,0:15:59.20:209,0,59	0/1:12,0:12:40.84:197,0,41	0/1:9,0:9:35.46:67,0,35	0/0:12,0:12:33.10:0,33,512	0/0:14,0:14:36.12:0,36,584	0/0:30,0:30:18.44:0,18,630	0/1:9,6:15:99:149,0,109	0/0:20,0:19:54.18:0,54,866	0/0:16,0:16:48.16:0,48,765	0/0:15,0:15:12.34:0,12,157	0/0:8,0:8:21.07:0,21,341	0/1:17,0:17:76.62:77,0,94	0/0:20,0:19:16.18:0,16,315	0/0:20,0:20:60.20:0,60,972	0/0:13,0:13:12.11:0,12,100	0/1:8,0:8:11.66:12,0,43	0/0:3,0:2:1.82:0,2,5
chr10	5711934	.	CAT	C	1406.33	PASS	AB=0.887;AC=19;AF=0.339;AN=56;BaseQRankSum=6.150;DP=477;FS=4.108;HRun=0;HaplotypeScore=118.8146;InbreedingCoeff=-0.0787;MQ=53.36;MQ0=14;MQRankSum=-4.844;QD=5.02;ReadPosRankSum=2.138;VQSLOD=2.9905;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:60.10:0,60,952	1/1:4,0:4:8.18:37,8,0	0/0:34,0:9:16.94:0,17,273	0/1:38,1:13:29.18:29,0,116	1/1:13,8:20:1.75:165,2,0	0/1:22,0:22:26.92:27,0,68	1/1:11,7:18:4.92:283,5,0	0/1:27,0:27:36.75:37,0,274	0/0:8,0:8:24:0,24,408	0/1:8,8:16:40.89:394,0,41	0/1:9,5:14:22.98:23,0,33	0/1:9,6:15:30.64:91,0,31	0/1:9,3:12:7.78:182,0,8	0/1:5,4:9:20.85:39,0,21	0/0:13,0:13:33.10:0,33,590	0/0:14,0:14:17.09:0,17,520	0/1:30,0:29:2.09:2,0,206	0/1:15,0:15:51.93:60,0,52	0/0:20,0:19:44.03:0,44,772	0/0:18,0:18:38.24:0,38,754	0/0:15,0:15:16.17:0,16,97	0/0:9,0:9:27.06:0,27,433	0/1:15,1:16:57.28:173,0,57	0/0:18,1:18:29.90:0,30,214	0/0:20,0:20:43.24:0,43,989	0/1:14,0:14:22.68:23,0,61	0/1:8,0:8:2.67:3,0,32	0/0:3,0:2:2.22:0,2,7
chr10	5711936	.	T	TGCACAC	8576.22	PASS	AB=0.903;AC=36;AF=0.643;AN=56;BaseQRankSum=10.738;DP=480;FS=0.472;HRun=0;HaplotypeScore=123.1575;InbreedingCoeff=0.8183;MQ=53.69;MQ0=14;MQRankSum=-4.923;QD=27.14;ReadPosRankSum=0.918;VQSLOD=4.7084;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:62.77:0,63,1173	1/1:2,2:4:9.03:251,9,0	0/0:37,0:11:19.95:0,20,332	0/1:37,0:13:39.20:39,0,133	1/1:17,5:21:27.06:752,27,0	1/1:3,17:22:21.06:514,21,0	1/1:14,4:18:29.88:865,30,0	1/1:15,0:30:80.49:862,80,0	0/0:8,0:8:24.06:0,24,528	1/1:14,2:16:47.43:967,47,0	1/1:8,5:14:18.03:422,18,0	1/1:8,6:14:24.05:612,24,0	1/1:10,2:13:28.32:644,28,0	1/1:5,3:8:8.89:219,9,0	0/0:13,0:13:33.10:0,33,694	0/0:14,0:14:42.03:0,42,703	0/1:22,0:28:4.41:199,0,4	1/1:14,0:14:20.92:361,21,0	0/0:22,0:22:30.93:0,31,998	0/0:17,0:17:48.58:0,49,974	1/1:5,9:17:16.07:224,16,0	0/0:9,0:9:27.06:0,27,563	1/1:9,2:13:27.05:562,27,0	1/1:11,8:18:23.96:197,24,0	0/0:20,0:20:60.17:0,60,1338	1/1:3,0:14:41.95:589,42,0	1/1:4,0:8:21.05:295,21,0	1/1:2,0:2:0.89:2,1,0
chr10	5712049	.	GTAATTATTATCATTATTATTGTTATTGTTATTATTATTATTA	G	3067.74	PASS	AB=1.000;AC=27;AF=0.482;AN=56;BaseQRankSum=2.254;DP=245;FS=3.823;HRun=0;HaplotypeScore=216.5452;InbreedingCoeff=0.7426;MQ=52.08;MQ0=1;MQRankSum=-0.638;QD=28.94;ReadPosRankSum=-0.062;VQSLOD=2.6620;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:26.67:0,27,1117	1/1:7,0:7:18.06:253,18,0	0/1:3,0:3:2.98:3,0,172	0/0:4,0:3:2.18:0,2,273	1/1:0,16:16:17.70:374,18,0	1/1:10,0:10:30.06:374,30,0	1/1:3,0:3:9.02:101,9,0	0/0:25,0:24:72.18:0,72,2231	0/0:7,0:7:21.05:0,21,1414	1/1:0,0:11:21.06:279,21,0	1/1:1,18:19:17.78:685,18,0	1/1:5,0:5:12.03:204,12,0	1/1:4,0:4:12.02:177,12,0	1/1:3,0:3:9.02:117,9,0	0/0:5,0:5:15.03:0,15,883	0/0:3,0:3:9.02:0,9,715	0/0:29,0:29:87.22:0,87,8643	1/1:0,13:13:3.01:325,3,0	0/0:13,0:13:36.12:0,36,2860	0/0:3,0:3:6.02:0,6,429	1/1:2,0:2:3.01:40,3,0	0/0:2,0:2:3.01:0,3,215	1/1:0,0:5:2.76:17,3,0	1/1:0,5:5:3.01:319,3,0	0/0:16,0:16:45.15:0,45,5163	0/0:4,0:4:12.04:0,12,861	0/0:12,0:12:26.89:0,27,743	0/0:6,0:6:12.03:0,12,779
chr10	5712061	.	ATTATTATTGTTATTG	A	1860.59	PASS	AB=1.000;AC=19;AF=0.475;AN=40;BaseQRankSum=4.296;DP=221;FS=16.232;HRun=0;HaplotypeScore=98.9820;InbreedingCoeff=0.5132;MQ=50.93;MQ0=1;MQRankSum=-2.382;QD=15.64;ReadPosRankSum=-0.158;VQSLOD=1.0436;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:20.38:0,20,216	./.	0/0:3,0:3:3.01:0,3,38	0/1:4,0:2:4.01:6,0,4	1/1:16,0:16:3.01:66,3,0	./.	./.	1/1:6,15:20:45.03:591,45,0	0/0:5,0:5:15.03:0,15,270	./.	1/1:18,0:18:6.02:175,6,0	./.	./.	./.	0/0:2,0:2:6:0,6,196	0/0:2,0:2:6.02:0,6,178	0/0:28,0:28:55.10:0,55,2738	1/1:13,0:13:3.01:105,3,0	0/0:15,0:15:39.12:0,39,912	0/0:2,0:2:6:0,6,72	./.	0/0:1,0:1:3.01:0,3,48	0/1:4,0:4:0:0,0,0	1/1:5,0:5:3.01:99,3,0	0/1:17,0:17:14.49:14,0,1455	1/1:1,3:4:9.03:296,9,0	1/1:4,7:11:6.02:259,6,0	1/1:0,6:6:9.03:391,9,0
chr10	5712076	.	G	GTTATTATTA	1437.40	PASS	AB=1.000;AC=21;AF=0.656;AN=32;BaseQRankSum=-2.210;DP=172;FS=0.000;HRun=0;HaplotypeScore=89.4437;InbreedingCoeff=0.4445;MQ=51.77;MQ0=2;MQRankSum=-2.128;QD=16.71;ReadPosRankSum=-4.628;VQSLOD=-0.2802;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:11:19.50:167,20,0	./.	./.	./.	./.	./.	./.	1/1:19,0:18:23.99:261,24,0	1/1:3,2:5:3.01:136,3,0	1/1:2,0:2:3:28,3,0	0/0:18,0:18:0.85:0,1,2	./.	./.	./.	1/1:1,0:3:3.01:116,3,0	1/1:1,3:4:3.01:136,3,0	0/0:24,0:24:17.96:0,18,899	0/0:13,0:13:3.01:0,3,62	1/1:10,3:12:12.01:364,12,0	1/1:2,0:2:3.01:50,3,0	./.	./.	./.	1/1:5,0:5:2.94:18,3,0	1/1:15,0:15:12.04:262,12,0	0/0:3,0:3:6.02:0,6,124	0/1:7,0:7:20.57:21,0,56	0/0:6,0:6:9.03:0,9,180
chr10	5712766	.	C	CA	5837.17	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-13.227;DP=492;FS=3.327;HRun=7;HaplotypeScore=48.5862;InbreedingCoeff=0.9880;MQ=87.66;MQ0=0;MQRankSum=-1.235;QD=29.04;ReadPosRankSum=2.859;VQSLOD=5.4179;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:49:99:0,135,1303	1/1:0,4:4:12.04:145,12,0	0/0:23,0:23:40.91:0,41,409	0/0:16,0:16:38.64:0,39,324	1/1:2,13:15:39.12:471,39,0	1/1:0,16:15:36.11:435,36,0	1/1:2,17:19:48.15:580,48,0	0/0:34,0:34:90.12:0,90,862	0/0:12,0:12:30.04:0,30,290	1/1:2,13:16:39.12:471,39,0	1/1:4,11:15:39.12:466,39,0	1/1:2,16:18:39.12:471,39,0	1/1:2,9:11:24.07:290,24,0	1/1:3,11:14:24.07:290,24,0	0/0:18,0:18:45.07:0,45,435	0/0:9,0:9:24:0,24,219	0/0:25,0:25:63.10:0,63,608	1/1:0,26:26:63.19:761,63,0	0/0:14,0:14:33.05:0,33,319	0/0:15,0:15:45.07:0,45,434	1/1:1,13:14:10.14:406,10,0	0/0:9,0:9:24.04:0,24,232	1/1:0,17:17:42.13:507,42,0	1/1:1,15:16:45.14:544,45,0	0/0:20,0:20:57.06:0,57,537	0/0:22,0:22:57.09:0,57,551	0/0:10,0:10:27.02:0,27,254	0/0:14,0:14:42.07:0,42,406
chr10	5712914	.	ACG	A	3628.61	PASS	AB=0.915;AC=39;AF=0.722;AN=54;BaseQRankSum=-3.659;DP=333;FS=13.123;HRun=0;HaplotypeScore=62.5212;InbreedingCoeff=0.4961;MQ=54.60;MQ0=25;MQRankSum=0.650;QD=12.51;ReadPosRankSum=1.095;VQSLOD=1.8602;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:26:0.13:0,0,0	1/1:6,0:6:15.05:183,15,0	./.	0/0:6,0:4:2.96:0,3,19	1/1:6,5:10:9.02:98,9,0	1/1:16,0:14:27.04:288,27,0	1/1:11,0:10:16.93:187,17,0	1/1:29,0:28:46.78:365,47,0	0/1:6,0:6:0.98:1,0,19	1/1:10,7:16:42.08:416,42,0	0/1:9,0:9:0:0,0,0	1/1:12,0:9:18.01:192,18,0	1/1:3,0:3:6.02:73,6,0	1/1:8,0:7:11.97:105,12,0	0/0:6,0:3:0.98:0,1,21	0/0:7,0:6:0:0,0,0	1/1:20,0:19:11.54:92,12,0	1/1:22,0:21:50.89:529,51,0	0/0:18,0:17:21.53:0,22,150	1/1:6,0:5:1.55:4,2,0	1/1:14,0:10:21.04:238,21,0	0/0:2,0:2:2.96:0,3,19	1/1:8,4:10:12.04:145,12,0	1/1:8,0:6:6:58,6,0	0/1:10,0:10:2.49:2,0,29	0/1:4,11:15:9.23:342,0,9	1/1:5,0:5:6.02:73,6,0	1/1:22,0:20:30.48:237,30,0
chr10	5712928	.	GCGCACACACACA	G	647.56	PASS	AB=0.954;AC=13;AF=0.241;AN=54;BaseQRankSum=-3.507;DP=372;FS=19.331;HRun=0;HaplotypeScore=114.1352;InbreedingCoeff=-0.1920;MQ=47.33;MQ0=68;MQRankSum=-0.984;QD=3.21;ReadPosRankSum=-3.707;VQSLOD=-0.1442;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:25:0.37:0,0,1	0/0:5,0:5:15.05:0,15,407	./.	0/0:3,0:2:2.96:0,3,19	0/1:14,0:11:15.70:16,0,124	0/0:22,0:17:3.77:0,4,521	0/1:15,0:10:2.24:2,0,440	0/1:25,0:23:99:190,0,541	0/1:7,0:5:17.98:18,0,18	0/0:22,0:20:37.25:0,37,1341	1/1:5,0:8:0.47:1,0,0	0/1:14,0:10:25.55:26,0,330	0/0:6,0:5:10.85:0,11,283	0/1:14,0:10:14.82:15,0,132	0/0:8,0:3:6:0,6,55	0/0:8,0:7:0.89:0,1,2	0/1:4,18:19:62.37:398,0,62	0/1:21,0:19:34.06:34,0,1181	0/1:18,0:16:16.83:17,0,130	0/0:5,0:3:0.47:0,0,1	0/1:19,0:10:1.76:2,0,443	0/0:2,0:2:3.01:0,3,35	0/0:15,0:11:11.76:0,12,280	0/0:9,0:6:6.02:0,6,133	0/0:13,0:12:5.83:0,6,88	0/0:19,0:16:42.14:0,42,1065	0/0:4,0:4:9.03:0,9,287	0/1:22,0:16:56.19:56,0,582
chr10	5712930	.	GCACACA	G	823.32	PASS	AB=1.000;AC=15;AF=0.300;AN=50;BaseQRankSum=3.843;DP=372;FS=7.929;HRun=0;HaplotypeScore=88.8856;InbreedingCoeff=0.4358;MQ=44.82;MQ0=72;MQRankSum=-0.517;QD=7.22;ReadPosRankSum=1.080;VQSLOD=0.9103;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:25:0:0,0,0	0/0:5,0:5:14.95:0,15,169	./.	./.	0/0:15,0:12:4.26:0,4,40	0/1:21,0:16:9.21:9,0,163	0/0:16,0:9:3.80:0,4,168	0/0:23,0:21:13.39:0,13,257	1/1:3,2:3:3.01:51,3,0	0/0:22,0:20:29.48:0,29,570	1/1:10,0:8:0.89:2,1,0	0/0:14,0:10:13.50:0,13,147	0/0:6,0:5:10.27:0,10,128	0/0:14,0:10:6.49:0,6,67	1/1:8,1:3:3.01:62,3,0	0/0:6,1:7:0.47:0,0,1	0/1:23,0:19:30.50:126,0,30	0/0:22,0:20:45.09:0,45,540	1/1:11,7:16:24.08:466,24,0	1/1:5,0:3:3.01:62,3,0	0/0:19,0:10:17.97:0,18,154	./.	0/0:17,0:13:11.49:0,11,112	0/1:9,0:6:5.77:6,0,17	1/1:10,2:12:9.03:185,9,0	0/0:18,0:15:9.13:0,9,362	0/0:4,0:4:9.02:0,9,124	0/0:22,0:16:11.27:0,11,284
chr10	5713120	.	C	CT	1292.96	PASS	AB=0.752;AC=27;AF=0.482;AN=56;BaseQRankSum=-5.592;DP=454;FS=3.423;HRun=14;HaplotypeScore=52.8476;InbreedingCoeff=0.1861;MQ=69.20;MQ0=1;MQRankSum=1.717;QD=4.21;ReadPosRankSum=-1.013;VQSLOD=0.6239;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:25:20.28:0,20,59	0/1:3,5:8:20.62:73,0,21	1/1:20,0:12:5.66:29,6,0	0/0:12,0:11:6.25:0,6,28	1/1:14,2:16:19.27:139,19,0	1/1:5,15:20:15:132,15,0	0/1:6,12:18:11.52:158,0,12	0/1:28,1:32:29.11:29,0,181	0/1:18,2:20:8.86:9,0,78	1/1:7,11:18:18.43:151,18,0	0/1:4,7:11:3.79:83,0,4	1/1:7,3:10:17.97:149,18,0	0/1:5,10:15:26.57:34,0,27	0/1:2,7:9:10.27:44,0,10	0/1:15,0:14:6.04:6,0,95	0/0:13,0:15:27.57:0,28,165	0/0:5,0:20:23.93:0,24,69	0/1:5,20:25:10.65:158,0,11	0/0:20,1:21:8.81:0,9,183	0/0:15,0:15:15.35:0,15,111	1/1:2,8:10:12:105,12,0	0/0:6,0:6:5.76:0,6,38	1/1:1,5:6:9:79,9,0	1/1:4,12:18:6.72:77,7,0	0/1:18,0:19:17.38:17,0,105	0/0:13,1:15:1.30:0,1,119	0/0:15,0:15:17.53:0,18,115	0/1:14,3:17:2.11:2,0,113
chr10	5714416	.	AAT	A	46.68	PASS	AB=0.903;AC=11;AF=0.220;AN=50;BaseQRankSum=5.493;DP=165;FS=3.622;HRun=0;HaplotypeScore=55.8127;InbreedingCoeff=0.0106;MQ=44.21;MQ0=6;MQRankSum=1.614;QD=0.93;ReadPosRankSum=-2.275;VQSLOD=1.1444;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:7:5.96:0,6,135	./.	./.	0/0:3,0:3:9.03:0,9,111	0/0:1,0:1:2.98:0,3,22	0/0:9,0:9:18.17:0,18,345	0/1:4,0:4:0.01:0,0,79	0/0:37,0:30:23.66:0,24,666	0/0:1,0:1:3.01:0,3,57	0/0:7,0:7:8.21:0,8,148	1/1:1,0:1:2.50:9,2,0	0/1:7,0:7:2.84:3,0,71	0/1:3,0:3:0.94:1,0,16	0/0:4,0:4:11.96:0,12,106	1/1:2,0:2:5.52:26,6,0	0/0:7,0:7:15.05:0,15,260	0/0:17,0:17:9.08:0,9,53	0/0:8,0:7:15.04:0,15,189	0/1:5,1:4:11.15:11,0,104	0/0:1,0:1:3.01:0,3,40	./.	0/0:1,0:1:3.01:0,3,37	0/0:2,0:2:2.99:0,3,23	0/0:2,0:2:2.68:0,3,11	0/0:6,0:6:12.04:0,12,173	0/1:4,1:5:18.88:19,0,81	0/1:9,3:12:55.30:55,0,213	0/1:8,2:10:40.93:41,0,132
chr10	5714419	.	AATAATAAACAAC	A	387.10	PASS	AB=1.000;AC=5;AF=0.096;AN=52;BaseQRankSum=-0.699;DP=176;FS=1.637;HRun=0;HaplotypeScore=84.4873;InbreedingCoeff=0.3708;MQ=45.23;MQ0=7;MQRankSum=-1.585;QD=14.89;ReadPosRankSum=-0.551;VQSLOD=1.8289;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:7,0:7:42.51:43,0,494	./.	0/0:6,0:3:9.03:0,9,276	0/0:4,0:3:9.03:0,9,299	0/0:1,0:1:2.04:0,2,6	0/0:9,0:9:23.98:0,24,313	0/0:4,0:4:6.46:0,6,78	0/0:39,0:32:81.10:0,81,1816	0/0:1,0:1:3.01:0,3,110	0/0:7,0:7:19.44:0,19,145	0/0:1,0:1:3.01:0,3,40	0/0:7,0:7:13.48:0,13,76	0/0:3,0:3:7.57:0,8,49	0/0:4,0:4:9.08:0,9,104	0/0:3,0:3:9.03:0,9,209	0/0:8,0:8:15.05:0,15,531	1/1:1,16:17:12.04:438,12,0	0/0:8,0:7:9.50:0,9,159	0/0:7,0:5:15.05:0,15,607	0/0:1,0:1:3.01:0,3,103	./.	0/0:1,0:1:3.01:0,3,50	0/0:2,0:2:0.47:0,0,1	1/1:2,0:2:2.84:14,3,0	0/0:7,0:7:12.04:0,12,458	0/0:5,0:5:15.05:0,15,353	0/0:12,0:12:36.06:0,36,1087	0/0:10,0:10:30.08:0,30,897
chr10	5714421	.	TAATA	T	917.57	PASS	AB=0.889;AC=19;AF=0.380;AN=50;BaseQRankSum=1.386;DP=175;FS=12.270;HRun=0;HaplotypeScore=56.9578;InbreedingCoeff=-0.1743;MQ=44.72;MQ0=8;MQRankSum=0.822;QD=7.22;ReadPosRankSum=-0.391;VQSLOD=0.2678;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:7:3.33:0,3,159	./.	0/0:7,0:3:9.01:0,9,103	0/0:4,0:3:9.03:0,9,124	1/1:0,1:1:3.01:52,3,0	1/1:9,0:9:1.66:118,2,0	0/1:4,0:4:12.72:48,0,13	0/1:38,0:31:44.97:45,0,488	0/0:1,0:1:2.97:0,3,20	0/1:6,1:7:14.64:149,0,15	0/0:1,0:1:2.98:0,3,21	0/1:2,5:7:25.59:190,0,26	0/1:2,1:3:30.29:43,0,30	0/1:1,3:4:12.95:143,0,13	1/1:3,0:3:7.25:32,7,0	0/0:8,0:8:13.53:0,14,163	0/1:17,0:17:25.38:77,0,25	0/1:8,0:7:11.87:52,0,12	0/0:8,0:6:3.11:0,3,228	0/0:1,0:1:3.01:0,3,42	./.	./.	1/1:1,1:2:3.01:52,3,0	0/0:2,0:2:1.55:0,2,4	0/0:8,0:8:12.03:0,12,167	0/1:5,0:5:9.38:9,0,51	0/1:10,0:10:30.70:31,0,198	0/1:9,0:9:18.76:19,0,111
chr10	5714423	.	AT	A	683	PASS	AB=0.904;AC=26;AF=0.520;AN=50;BaseQRankSum=1.722;DP=173;FS=4.898;HRun=1;HaplotypeScore=52.6499;InbreedingCoeff=0.0753;MQ=45.18;MQ0=8;MQRankSum=0.377;QD=5.10;ReadPosRankSum=-0.058;VQSLOD=0.4078;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:7:15.78:0,16,172	./.	0/0:7,0:3:5.97:0,6,62	0/0:5,0:4:12.03:0,12,146	1/1:1,0:1:3.01:35,3,0	1/1:9,0:9:17.53:118,18,0	1/1:4,0:4:4.38:40,4,0	0/1:33,3:29:54.73:55,0,425	1/1:1,0:1:0.47:1,0,0	1/1:7,0:7:0.54:45,1,0	0/0:1,0:1:0:0,0,0	1/1:7,0:7:9.06:132,9,0	1/1:3,0:3:0.60:31,1,0	0/1:4,0:4:12.21:92,0,12	1/1:3,0:3:8.58:45,9,0	0/0:8,0:8:12.51:0,13,65	0/1:17,0:17:8.24:8,0,35	0/1:7,0:6:14.23:14,0,18	0/1:7,1:6:10.75:11,0,133	0/0:1,0:1:2.96:0,3,19	./.	./.	1/1:2,0:2:3.01:35,3,0	0/0:2,0:2:1.82:0,2,5	0/0:8,0:8:10.58:0,11,64	0/1:3,1:4:19.96:20,0,37	0/1:8,3:11:85.84:86,0,96	0/1:8,2:10:52.13:63,0,52
chr10	5714424	.	TA	T	775.71	PASS	AB=0.950;AC=23;AF=0.460;AN=50;BaseQRankSum=1.306;DP=170;FS=6.059;HRun=3;HaplotypeScore=52.0311;InbreedingCoeff=-0.2370;MQ=45.50;MQ0=7;MQRankSum=0.732;QD=5.54;ReadPosRankSum=0.141;VQSLOD=0.3297;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:7:18.30:0,18,184	./.	0/0:7,0:3:9.01:0,9,103	0/0:6,0:4:12.04:0,12,165	1/1:1,0:1:3.01:35,3,0	1/1:1,8:9:2.71:238,3,0	0/1:1,3:4:12.32:65,0,12	0/1:35,0:28:51.40:51,0,415	1/1:1,0:1:2.96:19,3,0	0/1:7,0:7:23.26:42,0,23	0/0:1,0:1:2.94:0,3,18	0/1:7,0:7:24.88:120,0,25	0/1:3,0:3:18.55:27,0,19	0/1:4,0:4:12.54:92,0,13	1/1:3,0:3:7.66:34,8,0	0/1:8,0:8:8.87:9,0,50	0/1:17,0:17:8.02:8,0,35	0/1:5,2:6:14.01:31,0,14	0/0:6,0:6:3.11:0,3,150	0/0:1,0:1:1.25:0,1,3	./.	./.	1/1:1,0:1:3.01:35,3,0	0/0:2,0:2:1.82:0,2,5	0/1:8,0:8:10.37:10,0,30	0/1:4,0:4:9.38:9,0,33	0/1:11,0:11:53.13:53,0,79	0/1:10,0:10:32.57:41,0,33
chr10	5714425	.	A	AAACAAC	4663.90	PASS	AB=0.900;AC=39;AF=0.848;AN=46;BaseQRankSum=-0.515;DP=181;FS=1.077;HRun=0;HaplotypeScore=60.9749;InbreedingCoeff=0.4171;MQ=44.45;MQ0=7;MQRankSum=-2.206;QD=31.51;ReadPosRankSum=1.309;VQSLOD=4.3812;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:8,0:9:52.05:52,0,344	./.	0/0:7,0:3:8.96:0,9,123	0/0:7,0:4:11.97:0,12,206	./.	1/1:9,0:9:2.60:10,3,0	1/1:4,0:4:2.68:11,3,0	1/1:37,0:30:48.62:1165,49,0	1/1:1,0:2:5.05:43,5,0	1/1:5,0:5:4.82:17,5,0	1/1:1,0:1:2.68:11,3,0	1/1:7,0:7:5.36:22,5,0	1/1:3,0:3:1.83:10,2,0	1/1:4,0:4:2.74:12,3,0	1/1:3,0:3:9.03:232,9,0	1/1:3,5:8:9.03:273,9,0	0/0:17,0:17:9.03:0,9,117	1/1:7,0:6:2.37:8,2,0	1/1:10,0:10:24.08:598,24,0	1/1:1,0:1:3:25,3,0	./.	./.	./.	1/1:1,0:2:1.82:5,2,0	1/1:2,5:8:11.86:158,12,0	1/1:6,0:6:12.04:342,12,0	1/1:11,0:11:27.09:828,27,0	1/1:9,2:11:30.10:842,30,0
chr10	5714428	.	C	CA	180.12	PASS	AB=0.803;AC=16;AF=0.320;AN=50;BaseQRankSum=6.947;DP=186;FS=2.021;HRun=3;HaplotypeScore=56.3557;InbreedingCoeff=-0.0054;MQ=52.84;MQ0=7;MQRankSum=-3.341;QD=3.22;ReadPosRankSum=4.354;VQSLOD=0.1360;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:24.07:0,24,295	./.	0/0:9,0:5:9.03:0,9,110	0/0:8,0:5:12.04:0,12,148	0/0:1,0:1:2.97:0,3,20	0/1:8,1:9:5.33:5,0,152	0/1:3,1:4:19.90:20,0,29	0/0:39,0:32:72.81:0,73,623	0/0:2,0:2:4.56:0,5,38	0/1:3,2:5:14.12:56,0,14	1/1:0,1:1:3.01:30,3,0	0/1:5,2:7:38.02:38,0,66	0/1:1,2:3:10.25:48,0,10	0/1:3,1:4:17.19:17,0,50	0/0:4,0:4:2.22:0,2,19	1/1:6,0:6:0.09:2,0,0	0/0:17,0:17:12.67:0,13,84	0/1:4,1:4:18.89:26,0,19	0/0:12,0:12:23.94:0,24,292	1/1:1,0:1:2.88:15,3,0	./.	./.	0/0:1,0:1:2.94:0,3,18	1/1:1,1:2:3.01:36,3,0	0/1:9,0:9:23.81:24,0,26	0/0:6,0:6:10.40:0,10,119	0/0:11,0:11:5.12:0,5,77	0/0:11,0:11:8.69:0,9,92
chr10	5714431	.	C	CA	182.37	PASS	AB=0.907;AC=19;AF=0.380;AN=50;BaseQRankSum=7.295;DP=190;FS=0.914;HRun=2;HaplotypeScore=56.7198;InbreedingCoeff=0.2998;MQ=58.93;MQ0=7;MQRankSum=-3.541;QD=3.58;ReadPosRankSum=4.758;VQSLOD=0.3682;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:27.07:0,27,318	./.	0/0:10,0:6:18.04:0,18,210	0/0:9,0:6:18.06:0,18,221	0/0:1,0:1:0.47:0,0,1	0/1:8,1:9:3.97:4,0,97	0/1:3,1:4:9.03:18,0,9	0/0:41,0:34:88.27:0,88,809	0/1:2,0:2:0.86:1,0,32	1/1:2,2:4:5.64:55,6,0	1/1:0,1:1:2.99:23,3,0	1/1:4,2:6:2.27:40,2,0	1/1:1,2:3:5:50,5,0	1/1:3,1:4:0.77:21,1,0	0/0:4,0:4:5.23:0,5,56	0/0:7,0:7:0.89:0,1,34	0/0:17,0:17:11.43:0,11,71	0/1:4,1:4:9.76:23,0,10	0/0:12,0:12:27.05:0,27,365	1/1:1,0:1:2.92:17,3,0	./.	./.	0/0:1,0:1:0.47:0,0,1	1/1:1,1:2:2.96:19,3,0	0/1:10,0:10:52.51:53,0,53	0/0:6,0:6:7.40:0,7,88	0/0:11,0:11:5.13:0,5,77	0/0:11,0:11:8.70:0,9,96
chr10	5714434	.	C	CA	200.03	PASS	AB=1.000;AC=20;AF=0.435;AN=46;BaseQRankSum=6.770;DP=190;FS=0.954;HRun=2;HaplotypeScore=56.8354;InbreedingCoeff=0.4481;MQ=67.06;MQ0=5;MQRankSum=-2.948;QD=4.35;ReadPosRankSum=4.906;VQSLOD=0.7222;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:30.08:0,30,359	./.	0/0:12,0:8:18.06:0,18,223	0/0:10,0:7:21.07:0,21,258	./.	1/1:7,1:8:2.49:25,2,0	1/1:2,2:4:5.83:45,6,0	0/0:40,0:34:85.26:0,85,794	0/1:2,0:2:18.61:19,0,31	1/1:1,2:3:5.99:57,6,0	1/1:0,1:1:3:25,3,0	1/1:4,2:6:5.95:48,6,0	1/1:1,2:3:5.58:35,6,0	1/1:3,1:4:2.97:25,3,0	0/0:5,0:5:5.24:0,5,56	0/0:7,0:7:0.90:0,1,35	0/0:16,0:16:14.79:0,15,96	1/1:2,1:3:2.90:30,3,0	0/0:13,0:13:27.06:0,27,366	0/0:1,0:1:2.80:0,3,13	./.	./.	./.	1/1:1,1:2:2.98:21,3,0	0/1:10,0:10:20.84:21,0,97	0/0:6,0:6:7.81:0,8,86	0/0:10,0:11:3.04:0,3,74	0/0:11,0:11:8.69:0,9,96
chr10	5714437	.	C	CA	195.81	PASS	AB=1.000;AC=19;AF=0.413;AN=46;BaseQRankSum=6.535;DP=164;FS=0.000;HRun=2;HaplotypeScore=55.6310;InbreedingCoeff=0.5185;MQ=71.32;MQ0=5;MQRankSum=-3.768;QD=13.05;ReadPosRankSum=5.255;VQSLOD=2.3934;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:33.09:0,33,396	./.	0/0:12,0:8:21.02:0,21,239	0/0:10,0:7:21.07:0,21,259	./.	1/1:0,1:1:3:29,3,0	1/1:1,1:2:4.25:31,4,0	0/0:37,0:34:82.27:0,82,746	0/1:2,0:2:30.98:36,0,31	1/1:0,2:2:6.01:63,6,0	1/1:0,1:1:3:27,3,0	1/1:0,2:2:6:55,6,0	1/1:0,2:2:5.50:37,5,0	1/1:0,1:1:3:29,3,0	0/0:5,0:5:8.26:0,8,91	0/0:7,0:7:0.90:0,1,35	0/0:15,0:15:8.90:0,9,59	1/1:0,1:1:3.01:32,3,0	0/0:13,0:13:30.01:0,30,403	0/0:1,0:1:1.82:0,2,5	./.	./.	./.	1/1:0,1:1:1.55:4,2,0	0/0:10,0:10:10.84:0,11,114	0/0:5,0:5:7.34:0,7,87	0/0:11,0:11:3.10:0,3,74	0/0:11,0:11:8.71:0,9,92
chr10	5714442	.	A	AACTCCGAGT	4380.35	PASS	AC=22;AF=0.440;AN=50;BaseQRankSum=5.485;DP=203;FS=1.661;HRun=0;HaplotypeScore=93.0796;InbreedingCoeff=0.7943;MQ=73.37;MQ0=3;MQRankSum=-5.018;QD=99.55;ReadPosRankSum=3.717;VQSLOD=5.4351;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:36.12:0,36,1103	./.	0/0:12,0:9:4.72:0,5,641	0/0:12,0:9:21.07:0,21,617	1/1:1,0:1:3.01:122,3,0	1/1:5,1:6:12.03:347,12,0	1/1:2,1:3:9.03:391,9,0	0/0:36,0:35:93.28:0,93,2191	0/0:2,0:2:5.61:0,6,108	1/1:1,2:3:9.03:425,9,0	1/1:3,1:4:9.03:429,9,0	1/1:2,2:4:12.04:545,12,0	1/1:1,2:3:6.02:255,6,0	1/1:2,1:3:3.01:144,3,0	0/0:7,0:7:18.06:0,18,506	0/0:7,0:7:11.91:0,12,194	0/0:15,0:15:12.04:0,12,208	1/1:5,1:6:15.05:744,15,0	0/0:15,0:15:45.02:0,45,1149	0/0:1,0:1:0:0,0,0	1/1:5,0:5:9.03:424,9,0	./.	./.	1/1:5,1:6:12.04:555,12,0	0/0:10,0:10:13.59:0,14,270	0/0:5,0:5:15.05:0,15,404	0/0:11,0:11:33.11:0,33,656	0/0:13,0:13:36.59:0,37,767
chr10	5714530	.	G	GAGT	2406.42	PASS	AC=8;AF=0.148;AN=54;BaseQRankSum=-9.150;DP=254;FS=4.335;HRun=0;HaplotypeScore=50.8233;InbreedingCoeff=0.8054;MQ=83.59;MQ0=0;MQRankSum=-3.153;QD=48.13;ReadPosRankSum=-4.401;VQSLOD=3.8067;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:51.17:0,51,848	0/0:1,0:1:3.01:0,3,50	0/0:11,0:11:33.08:0,33,495	0/0:8,0:8:24.07:0,24,362	0/0:3,0:3:9.03:0,9,150	0/0:13,0:13:36.12:0,36,600	0/0:9,0:9:27.09:0,27,450	1/1:7,28:32:81.23:1739,81,0	0/0:3,0:3:9.03:0,9,150	./.	0/0:5,0:5:15.05:0,15,250	0/0:7,0:7:15.05:0,15,250	0/0:5,0:5:15.05:0,15,250	0/0:4,0:4:12.04:0,12,200	0/0:6,0:6:15.05:0,15,250	0/0:4,0:4:12.04:0,12,199	0/0:20,0:20:57.19:0,57,949	0/0:15,0:15:39.13:0,39,644	0/0:17,0:17:51.17:0,51,848	0/0:4,0:4:12.04:0,12,197	0/0:25,0:25:72.25:0,72,1199	0/0:1,0:1:3.01:0,3,50	0/0:5,0:5:12.04:0,12,200	0/0:13,0:13:36.12:0,36,599	0/0:7,0:7:18.06:0,18,300	1/1:0,4:4:12.04:272,12,0	1/1:1,2:3:9.03:204,9,0	1/1:2,5:7:15.05:339,15,0
chr10	5714599	.	G	GATA	152.37	PASS	AC=2;AF=0.040;AN=50;BaseQRankSum=-2.119;DP=188;FS=1.698;HRun=0;HaplotypeScore=45.1687;InbreedingCoeff=0.2755;MQ=73.77;MQ0=0;MQRankSum=-2.860;QD=12.70;ReadPosRankSum=1.391;VQSLOD=3.0005;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:30.08:0,30,419	./.	0/0:4,0:4:3.01:0,3,44	./.	0/0:4,0:4:6.02:0,6,88	0/0:8,0:8:17.98:0,18,214	0/0:2,0:2:6.02:0,6,87	0/0:38,0:38:78.18:0,78,1026	0/0:3,0:3:3.01:0,3,43	0/0:3,0:3:8.99:0,9,106	0/0:3,0:3:6.02:0,6,86	0/0:3,0:3:6.02:0,6,87	0/0:3,0:3:6.02:0,6,85	0/0:3,0:3:6.02:0,6,83	0/0:4,0:4:9.03:0,9,129	0/0:6,0:6:9.03:0,9,129	1/1:8,4:12:15.04:239,15,0	0/0:16,0:16:21:0,21,270	0/0:16,0:16:27.05:0,27,360	0/0:3,0:3:9.03:0,9,126	0/0:4,0:4:6:0,6,68	./.	0/0:1,0:1:3.01:0,3,44	0/0:3,0:3:6.01:0,6,69	0/0:6,0:5:6.02:0,6,85	0/0:4,0:4:6.02:0,6,87	0/0:6,0:6:18.06:0,18,261	0/0:17,0:17:20.53:0,21,666
chr10	5714615	.	GTTATTA	G	1784.62	PASS	AB=0.680;AC=29;AF=0.690;AN=42;BaseQRankSum=-3.022;DP=184;FS=4.071;HRun=0;HaplotypeScore=48.0916;InbreedingCoeff=0.4707;MQ=51.63;MQ0=3;MQRankSum=-5.663;QD=19.40;ReadPosRankSum=1.408;VQSLOD=2.4668;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:24.08:0,24,790	./.	./.	0/0:1,0:1:1.25:0,1,3	1/1:2,4:6:3.01:62,3,0	1/1:1,6:7:15.05:313,15,0	./.	0/0:19,0:35:58.77:0,59,515	1/1:0,4:4:3.01:63,3,0	1/1:1,2:3:9.02:153,9,0	1/1:2,3:4:9.03:187,9,0	1/1:2,1:3:3.01:62,3,0	1/1:1,2:3:6.02:125,6,0	1/1:2,3:5:3.01:63,3,0	1/1:1,2:3:6.02:125,6,0	1/1:2,5:7:6.02:125,6,0	1/1:7,0:7:3.01:42,3,0	1/1:6,7:13:3.01:63,3,0	0/1:9,7:15:13.59:355,0,14	1/1:2,1:3:3.01:63,3,0	./.	./.	./.	./.	1/1:0,6:5:6.02:125,6,0	0/0:2,0:5:11.81:0,12,75	0/0:1,0:8:17.71:0,18,111	0/0:10,1:25:2.45:0,2,409
chr10	5714763	.	A	AC	5796.20	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-11.245;DP=394;FS=44.371;HRun=5;HaplotypeScore=35.8046;InbreedingCoeff=0.9857;MQ=64.03;MQ0=0;MQRankSum=0.837;QD=32.20;ReadPosRankSum=2.542;VQSLOD=1.8594;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,1:21:56.17:0,56,586	1/1:0,5:5:15.05:197,15,0	0/0:13,0:12:36.05:0,36,374	0/0:13,0:12:20.16:0,20,283	1/1:1,13:14:36.12:473,36,0	1/1:0,11:11:21.07:276,21,0	1/1:1,15:16:36.12:474,36,0	0/0:22,0:22:57.13:0,57,600	0/0:17,2:19:45.10:0,45,475	1/1:2,8:10:21.07:276,21,0	1/1:0,9:9:27.09:355,27,0	1/1:1,19:20:54.18:710,54,0	1/1:0,13:12:36.12:474,36,0	1/1:3,15:17:45.15:589,45,0	0/0:13,0:13:36.09:0,36,387	0/0:10,1:11:30.08:0,30,322	0/0:23,0:22:63.16:0,63,676	1/1:2,24:25:69.22:908,69,0	0/0:18,1:18:45.11:0,45,483	0/0:7,0:7:21.05:0,21,226	1/1:4,14:17:36.12:474,36,0	0/0:3,0:3:9.02:0,9,97	1/1:1,6:7:18.06:237,18,0	1/1:3,10:11:27.09:354,27,0	0/0:16,0:16:48.11:0,48,509	0/0:10,0:10:30.07:0,30,316	0/0:12,0:12:27.07:0,27,290	0/0:11,0:11:33.07:0,33,347
chr10	5715142	.	GC	G	9687.40	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=17.405;DP=651;FS=4.375;HRun=2;HaplotypeScore=86.3978;InbreedingCoeff=0.9998;MQ=89.55;MQ0=0;MQRankSum=-1.803;QD=34.47;ReadPosRankSum=3.941;VQSLOD=5.2193;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,138,1997	1/1:0,10:10:30.05:370,30,0	0/0:21,0:21:63.21:0,63,914	0/0:30,0:30:74.77:0,75,1025	1/1:0,16:16:39.04:485,39,0	1/1:0,13:13:33.11:428,33,0	1/1:0,32:32:75.24:974,75,0	0/0:37,0:37:99:0,102,1527	0/0:25,0:25:75.24:0,75,1101	1/1:0,23:23:69.21:883,69,0	1/1:0,18:18:51.17:662,51,0	1/1:0,11:11:33.11:428,33,0	1/1:2,20:22:54.07:700,54,0	1/1:0,27:27:81.26:1051,81,0	0/0:21,0:21:60.20:0,60,899	0/0:23,0:23:69.23:0,69,1034	0/0:41,0:41:99:0,123,1789	1/1:1,27:28:38.29:862,38,0	0/0:24,0:24:72.23:0,72,1058	0/0:22,0:22:63.21:0,63,943	1/1:0,44:44:99:1519,117,0	0/0:12,0:12:36.11:0,36,519	1/1:0,14:14:42.14:545,42,0	1/1:2,21:23:60.19:779,60,0	0/0:19,0:19:57.19:0,57,852	0/0:21,0:21:60.19:0,60,863	0/0:14,0:14:42.13:0,42,609	0/0:12,0:12:36.11:0,36,515
chr10	5715899	.	GA	G	3085.25	PASS	AB=0.537;AC=9;AF=0.161;AN=56;BaseQRankSum=2.893;DP=594;FS=5.005;HRun=5;HaplotypeScore=73.2120;InbreedingCoeff=0.8615;MQ=89.42;MQ0=0;MQRankSum=-2.150;QD=27.80;ReadPosRankSum=0.562;VQSLOD=3.7541;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,132,1772	0/0:5,0:5:15.05:0,15,205	0/0:24,0:24:66.21:0,66,861	0/0:20,0:20:54.07:0,54,675	0/0:23,0:23:66.22:0,66,903	0/0:17,0:17:45.15:0,45,615	0/0:22,0:22:66.22:0,66,903	1/1:1,19:20:54.15:613,54,0	0/0:23,0:23:54.18:0,54,739	0/0:32,0:32:93.30:0,93,1254	0/0:10,0:10:30.08:0,30,381	0/0:13,0:13:33.11:0,33,451	0/0:23,0:23:66.21:0,66,886	0/0:19,0:19:54.18:0,54,737	0/0:16,0:16:48.16:0,48,656	0/0:21,0:21:57.19:0,57,779	1/1:1,35:36:99:1123,99,0	0/0:14,0:14:42.09:0,42,551	0/0:22,0:22:66.20:0,66,875	0/0:18,0:18:51.17:0,51,697	0/0:44,0:44:99:0,120,1639	0/0:20,0:20:60.20:0,60,821	0/0:14,0:14:39.12:0,39,516	0/0:17,0:17:42.14:0,42,574	0/0:19,0:19:51.15:0,51,668	0/1:4,25:29:38.81:766,0,39	1/1:2,18:20:48.14:544,48,0	1/1:0,6:6:18.05:204,18,0
chr10	5715940	.	T	TG	6186	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-14.365;DP=639;FS=3.122;HRun=0;HaplotypeScore=67.3969;InbreedingCoeff=0.9993;MQ=86.95;MQ0=0;MQRankSum=-5.935;QD=43.26;ReadPosRankSum=0.668;VQSLOD=5.4242;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,138,1894	0/0:8,0:8:24.08:0,24,334	0/0:21,0:21:63.07:0,63,831	0/0:21,0:21:62.56:0,63,810	0/0:26,0:26:78.26:0,78,1084	0/0:21,0:21:60.20:0,60,839	0/0:26,0:26:78.22:0,78,1039	0/0:28,0:28:84.28:0,84,1175	1/1:0,27:27:72.25:1151,72,0	0/0:26,0:26:75.25:0,75,1047	0/0:13,0:13:33.11:0,33,461	0/0:18,0:18:54.18:0,54,755	0/0:26,0:26:78.26:0,78,1088	0/0:27,0:27:75.21:0,75,1046	1/1:0,19:19:51.17:815,51,0	1/1:1,22:23:60.20:959,60,0	0/0:35,0:35:99:0,105,1467	0/0:20,0:20:57.19:0,57,794	1/1:0,18:18:51.17:816,51,0	1/1:0,16:16:42.14:671,42,0	0/0:41,0:41:99:0,120,1678	1/1:1,20:21:57.19:910,57,0	0/0:11,0:11:33.11:0,33,461	0/0:17,0:17:51.17:0,51,712	1/1:0,19:19:54.18:863,54,0	0/0:33,0:33:93.31:0,93,1301	0/0:22,0:22:60.20:0,60,838	0/0:9,0:9:27.09:0,27,378
chr10	5718985	.	A	AGT	17827.95	PASS	AB=0.671;AC=48;AF=0.857;AN=56;BaseQRankSum=-2.938;DP=1054;FS=9.548;HRun=0;HaplotypeScore=376.3109;InbreedingCoeff=0.6071;MQ=45.69;MQ0=22;MQRankSum=-1.827;QD=19.01;ReadPosRankSum=1.602;VQSLOD=4.1971;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,1:38:93.78:0,94,1232	1/1:7,10:17:3.16:99,3,0	0/0:37,0:10:26.81:0,27,298	0/0:40,0:15:17.49:0,17,357	0/1:7,22:29:5.12:82,0,5	1/1:2,11:13:11.93:173,12,0	1/1:14,16:32:23.96:376,24,0	1/1:16,35:43:99:1622,105,0	1/1:17,39:53:92.24:1386,92,0	1/1:17,37:53:99:2039,141,0	1/1:8,12:19:8.89:128,9,0	1/1:13,21:34:24.02:299,24,0	1/1:15,36:51:99:1182,100,0	1/1:18,35:54:17.60:279,18,0	1/1:21,43:58:71.76:1220,72,0	1/1:7,45:52:62.54:1012,63,0	1/1:19,18:38:72.59:1137,73,0	1/1:11,5:19:1.28:380,1,0	0/1:12,5:8:8.23:288,0,8	1/1:7,25:32:47.93:799,48,0	1/1:40,15:61:5.82:76,6,0	1/1:11,34:45:65.89:1111,66,0	1/1:13,18:31:20.82:299,21,0	1/1:11,17:37:8.72:123,9,0	1/1:3,25:28:38.80:631,39,0	1/1:22,27:47:99:1838,114,0	1/1:2,23:27:45.22:730,45,0	1/1:3,18:21:30.99:521,31,0
chr10	5718991	.	TGA	T	2413.38	PASS	AB=0.979;AC=22;AF=0.393;AN=56;BaseQRankSum=6.990;DP=1049;FS=6.754;HRun=0;HaplotypeScore=453.3836;InbreedingCoeff=0.4860;MQ=45.50;MQ0=20;MQRankSum=-8.790;QD=4.59;ReadPosRankSum=-6.129;VQSLOD=0.3807;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,101,1768	0/1:16,0:16:11:14,0,11	0/0:38,0:11:22.16:0,22,437	0/0:39,0:15:19.16:0,19,461	0/0:31,0:31:0.66:0,1,13	0/1:14,1:15:11.09:32,0,11	0/1:29,2:30:2.45:47,0,2	0/0:51,0:44:7.27:0,7,666	0/1:57,0:54:18.72:19,0,617	1/1:53,0:52:75.70:1150,76,0	1/1:20,2:21:3.57:26,4,0	1/1:38,2:40:16.71:136,17,0	1/1:53,2:55:48.14:744,48,0	1/1:49,2:51:15.94:174,16,0	0/0:68,1:63:41.14:0,41,599	0/0:48,0:48:32.39:0,32,439	0/0:37,1:38:4.87:0,5,605	0/1:17,0:17:14.09:108,0,14	0/0:16,0:11:17.69:0,18,187	0/0:29,1:30:14.77:0,15,315	1/1:50,5:51:3.11:30,3,0	0/0:43,0:43:20.23:0,20,516	1/1:28,1:29:7.56:59,8,0	1/1:35,1:36:6.68:60,7,0	0/0:30,0:30:33.70:0,34,343	0/1:49,0:47:0.34:0,0,928	0/0:29,0:29:29.86:0,30,431	0/0:20,0:20:34.57:0,35,313
chr10	5719003	.	AGTGT	A	5665.64	PASS	AB=0.941;AC=26;AF=0.464;AN=56;BaseQRankSum=14.533;DP=955;FS=20.502;HRun=0;HaplotypeScore=448.2591;InbreedingCoeff=0.8235;MQ=42.83;MQ0=20;MQRankSum=-14.230;QD=13.82;ReadPosRankSum=-8.312;VQSLOD=2.0455;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:34:92.10:0,92,2110	1/1:5,8:13:23.31:180,23,0	0/0:35,0:10:13.63:0,14,245	0/0:42,0:15:32.75:0,33,578	1/1:8,21:29:28.20:201,28,0	1/1:4,10:14:23.37:175,23,0	1/1:10,7:20:13.89:119,14,0	0/0:48,0:43:93.58:0,94,1917	0/0:50,0:49:73.64:0,74,1575	1/1:8,34:41:99:1579,108,0	1/1:4,15:18:32.02:201,32,0	1/1:10,26:36:62.05:620,62,0	1/1:15,35:50:99:1286,104,0	1/1:11,32:44:74.44:664,74,0	0/0:66,0:64:56.39:0,56,1267	0/0:50,0:50:53.76:0,54,1194	0/1:34,0:34:11.46:11,0,1659	0/1:13,2:15:89.74:90,0,132	0/0:25,0:15:6.19:0,6,686	0/0:31,0:30:26.56:0,27,570	1/1:33,9:41:29.09:236,29,0	0/0:37,0:38:51.15:0,51,1219	1/1:5,19:24:25.35:271,25,0	1/1:17,7:26:5.47:34,5,0	0/0:31,0:31:32.80:0,33,804	0/0:41,2:41:20.33:0,20,2470	0/0:29,0:29:56.75:0,57,1342	0/0:20,0:19:39.13:0,39,942
chr10	5719007	.	T	TGTTTGA	12605.26	PASS	AB=0.941;AC=25;AF=0.446;AN=56;BaseQRankSum=13.346;DP=980;FS=17.579;HRun=0;HaplotypeScore=464.5663;InbreedingCoeff=0.8929;MQ=43.79;MQ0=20;MQRankSum=-15.703;QD=31.28;ReadPosRankSum=-11.614;VQSLOD=2.2276;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:35:95.95:0,96,2130	1/1:16,0:16:29.98:538,30,0	0/0:40,0:13:26.24:0,26,324	0/0:43,0:16:27.03:0,27,606	1/1:28,3:31:39.41:489,39,0	1/1:15,0:15:30.43:517,30,0	1/1:20,1:21:27.58:375,28,0	0/0:49,0:44:99:0,106,2083	0/0:50,0:49:74.80:0,75,1647	1/1:45,2:46:99:2422,126,0	1/1:19,2:20:37.17:581,37,0	1/1:34,4:38:69.62:1788,70,0	1/1:45,3:48:99:2325,113,0	1/1:47,2:49:97.28:1745,97,0	0/0:59,0:59:56.26:0,56,1247	0/0:48,0:48:53.33:0,53,1212	0/0:32,0:33:2.48:0,2,1605	0/1:15,1:16:80.48:352,0,80	0/0:27,0:15:38.95:0,39,781	0/0:30,0:29:26.45:0,26,572	1/1:47,1:44:31.50:526,31,0	0/0:39,0:39:50.54:0,51,1169	1/1:26,0:26:28.51:661,29,0	1/1:27,0:27:19.74:285,20,0	0/0:30,0:30:33.09:0,33,787	0/0:41,0:39:9.46:0,9,2378	0/0:31,0:30:57.66:0,58,1308	0/0:20,0:19:39.13:0,39,892
chr10	5719034	.	GAGTGTGTT	G	1005.10	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=0.499;DP=1041;FS=8.709;HRun=0;HaplotypeScore=530.8748;InbreedingCoeff=0.3340;MQ=40.61;MQ0=20;MQRankSum=-0.178;QD=3.85;ReadPosRankSum=4.224;VQSLOD=-0.1488;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:40:99:0,110,4075	0/0:15,0:15:45.08:0,45,1022	0/0:43,0:14:16.09:0,16,475	0/1:39,0:8:6.97:7,0,206	0/0:36,0:36:68.56:0,69,1274	0/0:19,0:19:50.89:0,51,1099	0/0:25,0:25:66.43:0,66,1488	0/0:55,0:54:99:0,153,4279	0/1:37,0:35:51.66:313,0,52	0/0:55,0:53:99:0,145,4120	0/0:25,0:24:57.13:0,57,867	0/0:48,0:48:99:0,115,2240	0/0:54,0:54:99:0,148,3324	0/0:64,0:63:99:0,165,3205	1/1:57,0:57:14.30:149,14,0	0/1:46,0:46:49.48:215,0,49	0/0:36,0:36:71.25:0,71,2645	0/0:14,0:14:16.04:0,16,786	1/1:18,0:8:23.99:360,24,0	0/0:25,0:24:11.56:0,12,67	0/0:65,4:64:60.52:0,61,709	0/1:34,0:34:55.44:55,0,87	0/0:27,0:27:57.80:0,58,911	0/0:28,0:28:23.62:0,24,194	0/1:30,0:30:55.30:55,0,81	0/0:46,0:45:99:0,116,4681	0/0:35,0:34:73.69:0,74,2753	0/0:20,0:19:42.14:0,42,1461
chr10	5719041	.	TTTGA	T	728.28	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=0.901;DP=1033;FS=20.244;HRun=0;HaplotypeScore=487.9734;InbreedingCoeff=0.8631;MQ=40.09;MQ0=19;MQRankSum=0.330;QD=3.14;ReadPosRankSum=2.684;VQSLOD=0.2374;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,113,3049	0/0:18,0:18:50.79:0,51,613	0/0:46,0:14:35.89:0,36,631	0/0:41,0:10:5.02:0,5,308	0/0:37,0:37:68.29:0,68,788	0/0:21,0:21:50.67:0,51,792	0/0:27,0:27:68.60:0,69,1020	0/0:60,0:54:99:0,142,3618	1/1:34,2:34:17.20:203,17,0	0/0:54,0:52:99:0,143,3580	0/0:26,0:25:51.16:0,51,489	0/0:48,0:48:99:0,114,1203	0/0:49,0:49:99:0,136,2300	0/0:66,0:65:99:0,155,2013	1/1:55,0:55:14.39:152,14,0	1/1:40,1:41:2.31:190,2,0	0/0:34,0:34:33.83:0,34,1972	0/0:13,0:14:14.28:0,14,637	1/1:18,0:8:21.43:196,21,0	1/1:22,1:23:5.61:49,6,0	0/0:62,0:63:60.95:0,61,487	1/1:28,1:29:2.39:38,2,0	0/0:25,0:25:57.65:0,58,421	0/0:24,0:26:20.97:0,21,133	1/1:29,1:30:10.41:76,10,0	0/0:50,0:48:99:0,141,3692	0/0:35,0:34:73.73:0,74,1841	0/0:19,0:18:39.10:0,39,1027
chr10	5719081	.	T	TGTGA	16379.15	PASS	AB=0.669;AC=34;AF=0.607;AN=56;BaseQRankSum=-2.574;DP=1168;FS=1.406;HRun=0;HaplotypeScore=411.0550;InbreedingCoeff=0.0891;MQ=32.65;MQ0=31;MQRankSum=-1.909;QD=17.41;ReadPosRankSum=5.367;VQSLOD=3.4190;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,117,2093	0/1:8,14:22:0.45:403,0,0	0/0:46,0:9:9.03:0,9,169	0/0:53,0:11:24.06:0,24,394	1/1:10,25:35:17.76:486,18,0	1/1:7,14:21:14.33:405,14,0	1/1:22,20:42:8.11:302,8,0	0/1:36,7:23:42.26:737,0,42	0/1:22,25:45:49.11:247,0,49	0/1:28,45:69:85.16:3449,0,85	1/1:15,17:32:8.52:243,9,0	0/1:23,27:50:19.57:387,0,20	0/1:19,30:48:6.61:1405,0,7	1/1:16,37:52:48:1146,48,0	0/1:35,34:67:26.56:33,0,27	0/1:26,28:54:24.93:587,0,25	1/1:11,14:25:51.60:1124,52,0	1/1:7,5:12:15.40:402,15,0	1/1:24,8:18:18.29:765,18,0	0/1:17,23:40:6.82:75,0,7	1/1:53,18:66:4.27:94,4,0	0/0:24,18:42:4.65:0,5,23	1/1:22,16:38:3.52:84,4,0	0/1:12,15:27:0.06:2,0,0	0/0:20,25:45:5.69:0,6,36	0/1:41,25:64:99:2555,0,118	1/1:12,17:29:43.03:1144,43,0	0/1:6,5:10:33.48:306,0,33
chr10	5719096	.	GTA	G	123.61	PASS	AB=0.824;AC=8;AF=0.143;AN=56;BaseQRankSum=3.129;DP=1113;FS=4.610;HRun=0;HaplotypeScore=397.5889;InbreedingCoeff=0.1554;MQ=31.81;MQ0=37;MQRankSum=-4.033;QD=0.45;ReadPosRankSum=-4.497;VQSLOD=0.0117;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,123,2168	0/0:20,0:20:15.12:0,15,253	0/0:40,0:6:17.65:0,18,255	0/0:46,0:9:26.91:0,27,369	0/0:36,0:36:17.71:0,18,295	0/0:22,0:21:14.34:0,14,288	0/1:34,0:34:3.63:4,0,42	0/0:34,0:17:5.28:0,5,356	0/1:29,18:45:6.97:69,0,7	0/0:79,0:75:18.39:0,18,2107	0/0:27,0:27:8.72:0,9,173	0/0:42,0:42:6.17:0,6,250	0/0:44,0:43:58.92:0,59,912	0/0:54,0:53:34.36:0,34,677	1/1:42,24:62:5.15:36,5,0	0/1:29,23:52:43.06:43,0,86	0/0:21,0:21:40.20:0,40,601	0/0:10,0:10:3.14:0,3,239	0/1:25,4:12:83.25:83,0,96	1/1:29,16:44:1.81:5,2,0	0/0:70,0:65:1.79:0,2,57	0/0:28,16:44:3.98:0,4,12	0/0:41,0:41:5.09:0,5,66	0/0:25,0:25:2.90:0,3,16	0/0:29,15:44:4.19:0,4,21	0/0:60,0:58:5.98:0,6,1360	0/0:26,0:26:14.05:0,14,472	0/0:8,0:8:14.56:0,15,252
chr10	5719105	.	AGT	A	254.19	PASS	AB=0.807;AC=6;AF=0.107;AN=56;BaseQRankSum=3.560;DP=1103;FS=2.164;HRun=0;HaplotypeScore=375.5821;InbreedingCoeff=0.1937;MQ=31.71;MQ0=33;MQRankSum=-3.252;QD=1.14;ReadPosRankSum=-0.218;VQSLOD=1.2780;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:91.53:0,92,1552	0/0:17,0:17:8.25:0,8,123	0/0:36,0:6:18.06:0,18,276	0/0:35,1:7:18.06:0,18,303	0/0:38,0:38:17.70:0,18,209	0/0:19,0:18:11.33:0,11,195	0/0:35,0:35:3.84:0,4,37	0/0:32,0:18:26.71:0,27,359	0/1:33,13:46:70.83:72,0,71	0/0:78,0:73:99:0,157,1809	0/0:30,0:30:14.71:0,15,166	0/0:47,0:47:32.58:0,33,278	0/0:45,0:45:58.73:0,59,646	0/0:54,0:54:29.99:0,30,398	0/0:36,23:55:8.03:0,8,42	0/1:52,12:64:90.42:103,0,90	0/0:18,0:18:33.07:0,33,442	0/0:7,0:9:7.57:0,8,106	0/1:22,4:12:83.73:132,0,84	1/1:27,16:42:6.74:60,7,0	0/0:69,0:66:1.18:0,1,50	0/0:39,14:53:7.98:0,8,77	0/0:41,0:41:8.71:0,9,71	0/0:31,0:34:5.49:0,5,34	0/1:27,15:42:0.07:0,0,0	0/0:57,0:55:99:0,130,1379	0/0:18,0:18:17.95:0,18,257	0/0:12,0:11:17.61:0,18,250
chr10	5719108	.	G	GTA	5178.58	PASS	AB=0.778;AC=24;AF=0.429;AN=56;BaseQRankSum=2.969;DP=1112;FS=3.019;HRun=0;HaplotypeScore=353.1620;InbreedingCoeff=-0.4049;MQ=31.98;MQ0=33;MQRankSum=-5.570;QD=5.80;ReadPosRankSum=3.705;VQSLOD=3.0870;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,99,1425	0/0:12,6:18:7.70:0,8,117	0/0:36,0:7:18.06:0,18,265	0/0:37,0:8:20.69:0,21,285	0/1:24,11:35:99:141,0,128	0/0:14,6:19:14.36:0,14,200	1/1:23,13:36:2.16:59,2,0	0/1:35,1:19:65.54:66,0,277	0/1:25,19:43:4.51:136,0,5	0/1:48,27:70:99:1452,0,739	0/1:19,11:30:97.48:97,0,99	0/1:34,15:49:99:318,0,105	0/1:31,15:45:99:563,0,238	0/1:44,13:56:29.80:30,0,378	1/1:35,25:56:9.86:77,10,0	0/1:29,33:62:20.31:251,0,20	0/1:17,3:20:99:119,0,335	0/1:9,0:9:40.07:40,0,50	0/1:21,5:12:39.38:184,0,39	0/1:22,24:45:9.02:23,0,9	0/0:63,5:65:2.58:0,3,46	0/1:31,24:55:3.58:42,0,4	0/1:20,22:42:14.08:51,0,14	0/1:30,6:36:6.16:48,0,6	0/1:20,22:42:0.02:0,0,0	0/1:30,29:57:99:1387,0,581	0/1:14,3:17:39.23:39,0,198	0/1:9,1:11:54.34:54,0,165
chr10	5719111	.	TGTGA	T	552.78	PASS	AB=0.998;AC=22;AF=0.393;AN=56;BaseQRankSum=-1.503;DP=1114;FS=9.202;HRun=0;HaplotypeScore=384.0507;InbreedingCoeff=-0.3403;MQ=32.58;MQ0=29;MQRankSum=3.080;QD=0.66;ReadPosRankSum=-8.372;VQSLOD=-0.2048;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:96.27:0,96,2402	0/1:18,0:18:17.61:18,0,83	0/0:32,0:7:17.98:0,18,309	0/0:35,0:8:17.87:0,18,330	0/1:35,0:35:33.11:33,0,172	0/0:19,0:18:12.05:0,12,191	0/0:39,0:39:7.09:0,7,55	0/1:33,0:22:47.41:47,0,436	0/1:48,0:47:88.30:88,0,88	0/1:74,0:68:26.95:27,0,1398	0/1:31,0:31:11.20:11,0,52	0/1:50,0:50:22.94:23,0,188	0/1:48,0:47:52.90:53,0,402	0/1:55,0:54:0.22:0,0,313	0/1:60,0:56:16.47:16,0,56	0/1:61,0:61:68.23:68,0,121	0/1:20,0:20:42.42:42,0,430	0/1:8,0:8:62.92:75,0,63	0/0:24,0:13:3.12:0,3,153	0/1:47,0:46:8.10:20,0,8	0/0:66,2:66:3.80:0,4,68	0/1:59,0:59:12.70:81,0,13	0/1:42,0:42:0.25:0,0,0	1/1:37,1:38:5.17:22,5,0	1/1:43,0:43:3:26,3,0	0/1:57,2:57:46.22:46,0,1002	0/0:17,0:17:16.13:0,16,162	0/1:12,0:12:5.82:6,0,261
chr10	5719112	.	G	GTA	5616.26	PASS	AB=0.992;AC=26;AF=0.464;AN=56;BaseQRankSum=2.055;DP=1101;FS=0.408;HRun=0;HaplotypeScore=353.9980;InbreedingCoeff=-0.3992;MQ=32.92;MQ0=27;MQRankSum=-4.630;QD=6.17;ReadPosRankSum=3.807;VQSLOD=2.8332;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:96.25:0,96,1396	0/1:18,0:18:2.75:3,0,116	0/0:29,0:7:18.05:0,18,229	0/0:34,0:8:17.79:0,18,258	0/1:34,0:34:99:130,0,130	0/0:21,0:20:11.25:0,11,174	1/1:40,0:40:0.09:17,0,0	0/1:35,0:24:99:157,0,263	0/1:44,1:44:6.12:192,0,6	0/1:74,1:69:99:1592,0,658	0/1:31,0:31:87.20:87,0,96	0/1:49,0:50:99:345,0,105	0/1:47,1:47:99:524,0,220	0/1:53,1:54:99:122,0,285	1/1:57,1:54:14.85:121,15,0	0/1:57,1:58:3.59:207,0,4	0/1:21,0:21:99:121,0,301	0/1:7,0:7:13.31:13,0,41	0/1:21,0:11:5.30:218,0,5	0/1:45,0:44:12.43:19,0,12	0/0:69,0:68:5.53:0,6,62	0/1:57,0:58:6.44:135,0,6	0/1:41,0:41:12.17:47,0,12	0/1:38,0:38:5.22:49,0,5	1/1:41,0:42:2.97:26,3,0	0/1:60,0:58:99:1394,0,509	0/1:17,0:17:42.14:42,0,158	0/1:12,0:12:56.38:56,0,165
chr10	5719113	.	TGA	T	1273.98	PASS	AB=0.975;AC=28;AF=0.500;AN=56;BaseQRankSum=-2.275;DP=1096;FS=29.717;HRun=0;HaplotypeScore=361.3406;InbreedingCoeff=-0.5875;MQ=33.00;MQ0=26;MQRankSum=3.572;QD=1.28;ReadPosRankSum=-9.068;VQSLOD=-0.0397;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:96.25:0,96,1740	0/1:18,0:18:29.54:30,0,69	0/0:28,0:8:20.94:0,21,221	0/0:33,0:8:17.59:0,18,268	0/1:34,0:34:39.38:39,0,109	0/1:21,0:20:10.83:11,0,162	0/1:41,0:41:30.57:34,0,31	0/1:33,1:23:99:158,0,300	0/1:44,0:44:17.62:149,0,18	0/1:73,0:67:99:186,0,1077	0/1:31,0:31:17.56:18,0,41	0/1:50,0:50:24.29:24,0,94	0/1:48,1:48:24.31:24,0,313	0/1:52,0:51:24.01:24,0,251	0/1:59,0:54:19.38:59,0,19	0/1:59,0:59:21.43:113,0,21	0/1:19,0:19:39.42:39,0,350	0/1:6,2:8:16.29:16,0,83	0/1:22,0:11:14.67:75,0,15	1/1:45,0:44:5.26:42,5,0	0/1:59,9:66:34.98:56,0,35	0/1:58,0:58:13.70:103,0,14	1/1:42,0:42:2.64:24,3,0	0/1:34,4:38:10.60:11,0,15	1/1:43,0:43:8.99:76,9,0	0/1:61,0:59:91.83:92,0,701	0/1:17,0:17:21.80:22,0,172	0/1:11,0:12:7.04:7,0,207
chr10	5719115	.	A	AGT	3989.15	PASS	AB=0.973;AC=31;AF=0.554;AN=56;BaseQRankSum=3.975;DP=1103;FS=0.948;HRun=0;HaplotypeScore=351.6850;InbreedingCoeff=-0.1618;MQ=33.39;MQ0=25;MQRankSum=-2.347;QD=4.10;ReadPosRankSum=1.569;VQSLOD=1.8690;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:96.30:0,96,1316	0/0:17,0:17:0.72:0,1,34	0/0:26,0:8:15:0,15,168	0/0:32,0:7:14.78:0,15,200	0/1:34,0:34:31.76:82,0,32	0/0:21,0:20:1.65:0,2,18	0/1:42,0:42:31.66:33,0,32	0/1:35,0:24:57.88:58,0,160	1/1:45,0:44:1.48:55,1,0	0/1:73,1:68:99:1023,0,352	1/1:30,0:30:8.13:91,8,0	0/1:50,0:50:19.72:227,0,20	0/1:50,0:48:0.17:365,0,0	0/1:51,0:51:7.75:81,0,8	1/1:60,0:56:8.71:45,9,0	1/1:60,0:60:25.40:179,25,0	0/1:19,1:20:99:150,0,143	0/1:12,1:13:29.22:70,0,29	1/1:21,0:11:19.25:124,19,0	1/1:46,0:45:3.87:33,4,0	0/1:52,17:67:3.26:201,0,3	0/1:59,0:59:3.22:43,0,3	1/1:42,0:42:5.83:40,6,0	0/1:31,2:34:13.39:32,0,13	1/1:43,0:43:6.44:51,6,0	0/1:60,0:58:99:955,0,110	0/1:20,0:20:25.68:26,0,41	0/1:13,0:13:26.36:26,0,58
chr10	5719167	.	AGT	A	4780.94	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-0.338;DP=1196;FS=1.572;HRun=0;HaplotypeScore=263.7365;InbreedingCoeff=0.9374;MQ=41.62;MQ0=32;MQRankSum=2.768;QD=15.73;ReadPosRankSum=2.658;VQSLOD=4.8273;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:36:84.22:0,84,1298	0/0:14,0:14:29.75:0,30,453	0/0:26,0:2:3.01:0,3,46	0/0:23,0:2:3.01:0,3,44	0/0:33,0:34:61.94:0,62,972	0/0:23,0:21:30.09:0,30,477	0/0:66,0:66:50.71:0,51,981	0/0:63,0:49:66.33:0,66,494	1/1:16,26:40:31.65:672,32,0	0/0:75,0:70:99:0,170,2483	0/0:28,0:28:45.57:0,46,720	0/0:45,0:45:58.08:0,58,925	0/0:45,0:44:87.67:0,88,1399	0/0:62,0:62:75.26:0,75,1235	1/1:16,34:47:29.87:763,30,0	1/1:9,35:43:41.95:509,42,0	0/0:34,0:37:74.73:0,75,1159	0/0:22,0:22:34.57:0,35,787	1/1:16,18:24:24.08:606,24,0	1/1:17,29:46:58.83:778,59,0	0/0:94,0:92:60.67:0,61,993	1/1:12,41:52:41.61:876,42,0	0/0:41,0:41:57.11:0,57,917	0/0:53,0:53:31.29:0,31,514	1/1:17,18:35:48.08:576,48,0	0/0:35,0:56:92.98:0,93,928	0/0:8,0:24:55.24:0,55,473	0/0:5,0:12:27.27:0,27,254
chr10	5719171	.	T	TGA	2073.76	PASS	AB=0.926;AC=6;AF=0.107;AN=56;BaseQRankSum=2.177;DP=1232;FS=12.852;HRun=0;HaplotypeScore=277.3060;InbreedingCoeff=0.2029;MQ=41.79;MQ0=37;MQRankSum=-4.243;QD=10.86;ReadPosRankSum=-1.094;VQSLOD=1.7827;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:36:96.21:0,96,1309	0/0:16,0:16:33.31:0,33,453	0/0:23,0:1:3.01:0,3,44	0/0:23,0:1:3.01:0,3,44	0/0:36,0:36:60.13:0,60,905	0/0:27,0:25:32.05:0,32,467	0/0:66,2:68:59.78:0,60,959	0/1:56,12:53:99:876,0,294	0/0:44,0:42:59.11:0,59,388	0/0:76,2:72:40.98:0,41,2281	0/0:32,0:32:49.34:0,49,703	0/0:47,0:47:68.54:0,69,952	0/0:47,0:46:38.56:0,39,1242	0/0:64,1:64:67.48:0,67,1137	0/0:51,0:48:70.52:0,71,460	0/0:47,0:46:40.37:0,40,264	0/0:36,0:36:42.13:0,42,1018	0/1:22,1:22:52.20:52,0,595	0/0:39,0:27:67.72:0,68,443	0/0:43,0:43:70.06:0,70,458	0/0:92,5:93:20.04:0,20,900	0/0:53,0:52:75.25:0,75,472	0/0:41,0:41:57.02:0,57,839	0/0:55,0:54:15.84:0,16,483	0/0:34,0:34:47.38:0,47,316	0/1:57,1:55:99:641,0,205	1/1:26,0:26:37.20:458,37,0	0/1:12,1:12:39.82:176,0,40
chr10	5719174	.	G	GTA	1381.52	PASS	AB=0.994;AC=5;AF=0.089;AN=56;BaseQRankSum=3.459;DP=1240;FS=15.454;HRun=0;HaplotypeScore=280.8392;InbreedingCoeff=0.2736;MQ=42.69;MQ0=39;MQRankSum=-2.977;QD=8.37;ReadPosRankSum=-0.243;VQSLOD=1.8806;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:96.20:0,96,1308	0/0:18,0:18:36.38:0,36,473	0/0:27,0:1:3.01:0,3,44	0/0:26,0:2:3.01:0,3,42	0/0:36,1:37:10.86:0,11,839	0/0:26,0:24:32.05:0,32,467	0/0:68,0:68:78.97:0,79,1049	0/1:70,0:53:99:216,0,446	0/0:45,0:43:61.94:0,62,411	0/0:78,1:73:99:0,112,2383	0/0:30,1:31:32.39:0,32,672	0/0:44,0:44:34.37:0,34,879	0/0:48,0:46:71.25:0,71,1276	0/0:66,0:64:74.78:0,75,1142	0/0:52,0:49:70.74:0,71,446	0/0:48,0:47:42.43:0,42,274	0/0:38,0:38:45.20:0,45,1043	0/0:23,0:22:43.97:0,44,701	0/0:39,0:26:76.70:0,77,505	0/0:44,0:44:69.24:0,69,461	0/0:98,0:94:66.38:0,66,955	0/0:52,1:52:60.30:0,60,455	0/0:39,0:39:57.11:0,57,842	0/0:56,0:54:39.08:0,39,532	0/0:32,0:32:47.19:0,47,316	0/1:55,1:53:99:636,0,214	1/1:26,0:26:38.12:470,38,0	0/1:13,0:12:45.21:183,0,45
chr10	5719179	.	TGA	T	1583.04	PASS	AB=0.991;AC=11;AF=0.196;AN=56;BaseQRankSum=7.357;DP=1255;FS=1.824;HRun=0;HaplotypeScore=281.7679;InbreedingCoeff=0.2061;MQ=43.45;MQ0=38;MQRankSum=-0.782;QD=3.97;ReadPosRankSum=1.284;VQSLOD=2.6761;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:36:89.86:0,90,1458	0/0:19,0:19:19.24:0,19,588	0/1:29,0:2:0.86:1,0,18	0/0:29,0:3:5.93:0,6,41	0/0:44,0:44:61.24:0,61,1105	0/0:29,0:27:35.61:0,36,612	0/0:72,2:74:38.59:0,39,1228	0/1:66,0:49:99:152,0,610	0/1:42,0:42:42.73:250,0,43	0/0:79,0:74:79.52:0,80,2598	0/0:33,0:33:48.40:0,48,857	0/0:46,0:46:57.50:0,58,1110	0/0:48,1:48:80.93:0,81,1594	0/0:67,0:65:80.21:0,80,1441	0/1:52,1:49:24.48:248,0,24	0/1:47,1:47:23.65:164,0,24	0/0:39,0:39:92.83:0,93,1469	0/0:23,1:23:16.64:0,17,880	0/1:39,0:26:90.51:203,0,91	0/1:42,0:42:49.46:206,0,49	0/0:93,3:93:48.44:0,48,1194	1/1:47,1:47:41.69:309,42,0	0/0:37,0:37:57.01:0,57,1011	0/0:48,9:55:34.67:0,35,660	1/1:30,1:31:10.04:202,10,0	0/0:57,1:55:62.65:0,63,1120	0/0:25,0:26:62.75:0,63,630	0/0:13,0:12:14.84:0,15,316
chr10	5719281	.	A	AGTGT	9704.20	PASS	AB=0.603;AC=43;AF=0.768;AN=56;BaseQRankSum=7.395;DP=1038;FS=4.584;HRun=0;HaplotypeScore=257.2185;InbreedingCoeff=0.5574;MQ=51.21;MQ0=17;MQRankSum=-1.048;QD=10.88;ReadPosRankSum=4.080;VQSLOD=3.8158;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,106,1720	1/1:6,0:23:33.09:150,33,0	0/0:29,0:22:62.94:0,63,831	0/0:30,0:22:45.85:0,46,626	0/1:13,0:35:12.06:124,0,12	1/1:14,0:38:57.42:266,57,0	1/1:23,0:36:47.17:236,47,0	1/1:35,0:31:42.34:237,42,0	1/1:23,17:41:60.17:1269,60,0	1/1:17,0:53:38.06:375,38,0	1/1:2,0:21:22.01:99,22,0	0/1:10,0:45:37.76:195,0,38	0/1:14,0:43:34.91:206,0,35	1/1:12,0:47:76.59:346,77,0	1/1:10,32:43:36.12:865,36,0	1/1:5,38:47:35.86:832,36,0	0/0:41,0:42:77.47:0,77,1434	1/1:13,0:25:38.81:183,39,0	1/1:15,2:11:20.95:313,21,0	0/1:10,20:32:3.22:946,0,3	1/1:51,1:91:59.74:512,60,0	1/1:10,13:23:36.11:820,36,0	1/1:9,0:30:33.09:150,33,0	1/1:25,0:51:77.64:344,78,0	1/1:9,14:26:29.57:622,30,0	0/1:19,0:40:1.37:355,0,1	1/1:5,0:21:35.98:180,36,0	1/1:3,0:10:17.71:78,18,0
chr10	5719868	.	A	AC	31080.02	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-12.637;DP=789;FS=0.843;HRun=0;HaplotypeScore=65.2657;InbreedingCoeff=1.0000;MQ=85.58;MQ0=0;MQRankSum=-8.003;QD=44.91;ReadPosRankSum=5.666;VQSLOD=4.5761;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,135,1882	1/1:0,16:16:45.15:719,45,0	0/0:23,0:23:66.19:0,66,882	0/0:27,0:27:70.14:0,70,1013	1/1:0,26:26:75.26:1198,75,0	1/1:0,28:28:81.28:1295,81,0	1/1:1,21:22:51.17:815,51,0	1/1:1,27:28:81.25:1264,81,0	1/1:0,30:30:84.29:1343,84,0	1/1:0,37:37:99:1773,111,0	1/1:0,23:23:63.21:1006,63,0	1/1:0,33:33:93.32:1487,93,0	1/1:1,34:35:96.33:1535,96,0	1/1:0,26:26:75.26:1199,75,0	1/1:0,37:37:99:1679,105,0	1/1:1,27:28:81.28:1294,81,0	1/1:0,27:27:75.26:1199,75,0	1/1:2,19:21:54.18:863,54,0	1/1:1,23:24:72.23:1122,72,0	1/1:0,21:21:54.18:863,54,0	1/1:1,38:39:99:1772,111,0	1/1:1,32:33:96.33:1535,96,0	1/1:1,35:36:99:1583,99,0	1/1:0,27:27:75.26:1199,75,0	1/1:0,17:17:51.17:815,51,0	1/1:2,25:27:78.26:1227,78,0	1/1:0,31:31:87.30:1385,87,0	1/1:0,19:19:57.19:911,57,0
chr10	5720280	.	CGG	C	1381.65	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=-6.089;DP=509;FS=5.803;HRun=11;HaplotypeScore=76.5439;InbreedingCoeff=0.6830;MQ=78.89;MQ0=0;MQRankSum=-2.284;QD=20.32;ReadPosRankSum=2.243;VQSLOD=3.0891;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:31:59.15:0,59,798	0/1:3,0:3:0:0,0,0	0/0:18,0:18:39.45:0,39,411	0/0:16,0:15:12.68:0,13,105	0/0:9,0:11:3.01:0,3,33	0/0:16,0:21:3.01:0,3,45	0/0:18,0:28:14.01:0,14,155	1/1:3,16:19:45.09:479,45,0	0/0:25,0:26:60.01:0,60,604	0/0:7,0:7:6.01:0,6,64	0/0:6,0:9:6.01:0,6,65	0/0:22,0:22:21.04:0,21,225	0/0:13,0:28:8.28:0,8,83	0/0:11,0:18:9.02:0,9,95	0/0:29,0:29:69.10:0,69,702	0/0:20,0:20:48.07:0,48,482	0/0:6,0:24:50.66:0,51,244	0/0:9,0:16:9.01:0,9,86	0/0:20,0:20:38.92:0,39,391	0/0:19,0:19:47.95:0,48,524	0/0:9,0:15:3:0,3,29	0/0:15,0:15:35.98:0,36,350	0/0:7,0:13:5.61:0,6,53	0/0:13,0:19:2.81:0,3,45	0/0:15,0:15:33.05:0,33,346	1/1:8,15:23:42.05:447,42,0	1/1:2,18:20:48.11:511,48,0	1/1:0,3:3:9.02:96,9,0
chr10	5721352	.	C	CCTGTCTGT	8612.57	PASS	AB=0.935;AC=31;AF=0.554;AN=56;BaseQRankSum=3.715;DP=701;FS=20.040;HRun=0;HaplotypeScore=221.7561;InbreedingCoeff=0.4771;MQ=71.10;MQ0=7;MQRankSum=0.586;QD=17.40;ReadPosRankSum=3.479;VQSLOD=2.1548;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:36.12:0,36,630	1/1:9,0:9:18.06:317,18,0	0/0:35,0:25:28.95:0,29,782	0/0:18,0:13:21.03:0,21,345	1/1:36,0:36:66.19:1058,66,0	1/1:8,20:29:6.02:217,6,0	1/1:17,0:17:36.12:612,36,0	0/0:26,0:26:60.17:0,60,955	1/1:22,0:22:1.32:22,1,0	1/1:35,0:35:93.31:1643,93,0	1/1:28,0:28:51.14:821,51,0	1/1:23,0:23:36.10:597,36,0	1/1:29,0:29:63.20:1134,63,0	1/1:25,0:24:45.14:738,45,0	0/1:38,0:38:2.39:17,0,2	0/1:34,0:34:1.71:20,0,2	0/0:22,0:22:38.36:0,38,472	0/1:15,0:15:57.15:325,0,57	0/0:17,0:16:1.61:0,2,8	1/1:24,0:24:4.17:63,4,0	1/1:18,0:18:30.08:462,30,0	0/1:33,0:33:12.91:58,0,13	0/1:6,27:35:0:1,0,0	0/1:17,0:17:35.64:400,0,36	0/0:32,0:32:1.56:0,2,4	0/1:27,0:27:99:110,0,1010	0/0:19,0:19:45.97:0,46,683	0/0:16,0:16:30.10:0,30,444
chr10	5721359	.	GTCTA	G	648.48	PASS	AB=1.000;AC=31;AF=0.646;AN=48;BaseQRankSum=1.900;DP=704;FS=0.000;HRun=0;HaplotypeScore=201.2236;InbreedingCoeff=0.0523;MQ=64.77;MQ0=8;MQRankSum=-1.935;QD=1.24;ReadPosRankSum=-3.069;VQSLOD=1.5521;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,8:22:9.50:135,10,0	0/0:7,0:7:3.01:0,3,46	./.	./.	0/0:34,0:34:12.03:0,12,153	0/1:23,0:23:15.05:15,0,28	0/0:21,0:21:2.84:0,3,22	./.	1/1:23,0:23:6.12:21,6,0	0/1:37,0:37:23.12:23,0,207	0/1:28,0:28:12.92:13,0,96	0/1:21,0:21:33.98:34,0,74	0/1:29,0:29:3.59:4,0,169	0/1:24,0:23:31.89:32,0,90	1/1:41,0:41:4.88:12,5,0	1/1:33,0:33:2.90:26,3,0	1/1:14,0:21:9.01:83,9,0	1/1:17,0:17:7.52:56,8,0	1/1:15,0:14:2.90:16,3,0	./.	0/0:20,0:20:9.01:0,9,93	1/1:34,0:34:0.44:1,0,0	0/1:37,0:36:0:0,0,0	0/1:17,0:17:11.92:12,0,137	1/1:39,0:39:2.24:5,2,0	0/1:27,0:27:22.08:105,0,22	1/1:21,0:21:15:134,15,0	1/1:16,0:16:6.02:64,6,0
chr10	5721413	.	CTATCTATCTATCTATCCATG	C	4247.95	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=5.824;DP=676;FS=5.380;HRun=0;HaplotypeScore=301.9935;InbreedingCoeff=0.7049;MQ=57.95;MQ0=7;MQRankSum=2.693;QD=14.65;ReadPosRankSum=-4.266;VQSLOD=2.3178;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:75.08:0,75,1968	0/0:12,0:12:33.11:0,33,946	0/0:14,0:11:31.89:0,32,420	0/0:11,0:9:18.10:0,18,359	0/0:16,0:16:36.12:0,36,1404	0/0:22,0:22:48.16:0,48,1471	0/0:21,0:20:35.51:0,36,803	1/1:26,0:20:47.72:774,48,0	1/1:0,24:24:12.04:594,12,0	0/0:26,0:26:75.12:0,75,3234	0/0:35,0:35:84.26:0,84,2558	0/0:30,0:30:78.21:0,78,2421	0/0:33,0:33:93.22:0,93,3246	0/0:23,0:22:57.65:0,58,2001	1/1:1,32:33:12.04:582,12,0	0/1:26,0:26:92.60:93,0,108	0/0:21,0:21:39.45:0,39,643	0/0:20,0:20:54.40:0,54,1335	1/1:0,12:12:36.08:673,36,0	1/1:1,31:32:26.50:194,26,0	0/0:24,0:24:48.62:0,49,1323	1/1:1,26:27:5.68:159,6,0	0/0:29,0:28:48.16:0,48,1192	0/0:16,0:16:38.26:0,38,1571	1/1:2,36:38:9.03:425,9,0	0/1:28,0:28:99:587,0,423	0/1:30,0:29:16.76:17,0,95	1/1:14,0:14:6.02:150,6,0
chr10	5721417	.	CTATCTATCTATCCATG	C	4497.07	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=8.902;DP=675;FS=4.002;HRun=0;HaplotypeScore=264.2521;InbreedingCoeff=0.7262;MQ=58.96;MQ0=7;MQRankSum=1.347;QD=14.46;ReadPosRankSum=-2.917;VQSLOD=3.1709;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:75.06:0,75,1683	0/0:12,0:12:33.11:0,33,731	0/0:18,0:15:43.52:0,44,609	0/0:12,0:10:21.74:0,22,417	0/0:18,0:18:42.11:0,42,1132	0/0:21,0:21:51.17:0,51,1329	0/0:21,0:20:38.42:0,38,697	1/1:29,0:23:56.89:911,57,0	1/1:24,0:24:12.04:412,12,0	0/0:25,0:25:72.11:0,72,2580	0/0:34,0:34:81.28:0,81,2146	0/0:29,0:29:75.25:0,75,2111	0/0:32,0:32:90.17:0,90,2662	0/0:23,0:22:57.18:0,57,1628	1/1:33,0:33:12.04:400,12,0	1/1:0,22:22:11.95:274,12,0	0/1:22,0:22:19.86:20,0,565	0/0:21,0:21:55.28:0,55,1231	1/1:12,0:12:33.09:559,33,0	1/1:32,0:32:23.57:174,24,0	0/0:22,0:22:48.15:0,48,1185	1/1:27,0:27:1.84:93,2,0	0/0:27,0:26:48.16:0,48,1047	0/0:16,0:16:41.74:0,42,1140	1/1:38,0:38:9.03:289,9,0	0/1:28,0:28:99:833,0,116	0/1:31,0:30:3.02:244,0,3	1/1:0,13:13:6.02:289,6,0
chr10	5721421	.	CTATCTATCCATG	C	5050.52	PASS	AB=0.764;AC=22;AF=0.393;AN=56;BaseQRankSum=8.714;DP=692;FS=6.297;HRun=0;HaplotypeScore=229.0849;InbreedingCoeff=0.7707;MQ=59.72;MQ0=7;MQRankSum=1.994;QD=16.08;ReadPosRankSum=-3.043;VQSLOD=2.6414;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:84.07:0,84,1583	0/0:13,0:13:36.11:0,36,605	0/0:24,0:20:43.55:0,44,750	0/0:14,0:11:24.66:0,25,490	0/0:17,0:17:39.13:0,39,893	0/0:23,0:23:57.19:0,57,1144	0/0:22,0:22:44.83:0,45,699	1/1:31,0:25:63:1008,63,0	1/1:24,0:24:12.04:300,12,0	0/0:26,0:26:72.11:0,72,1981	0/0:35,0:35:84.26:0,84,1807	0/0:31,0:31:81.26:0,81,1841	0/0:30,0:30:84.29:0,84,2012	0/0:22,0:21:54.17:0,54,1158	1/1:33,0:33:12.04:288,12,0	1/1:22,0:22:6.02:143,6,0	0/1:23,0:23:99:154,0,596	0/0:21,0:21:54.72:0,55,987	1/1:12,0:12:33.09:531,33,0	1/1:32,0:32:23.59:174,24,0	0/0:21,0:21:45.13:0,45,969	1/1:27,0:27:2.57:65,3,0	0/0:27,0:26:51.17:0,51,984	0/0:15,0:15:40.53:0,41,873	1/1:38,0:38:9.03:205,9,0	0/1:3,26:29:40.82:1372,0,41	1/1:1,29:30:18.06:611,18,0	1/1:13,0:13:6.02:199,6,0
chr10	5721429	.	CCATG	C	3577.51	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=11.080;DP=700;FS=4.657;HRun=0;HaplotypeScore=155.1289;InbreedingCoeff=0.9114;MQ=60.37;MQ0=2;MQRankSum=2.394;QD=12.38;ReadPosRankSum=-3.536;VQSLOD=2.4030;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:89.45:0,89,1372	0/0:12,0:12:30.10:0,30,496	0/0:28,0:22:49.57:0,50,872	0/0:17,0:14:33.44:0,33,687	0/0:20,0:20:42.13:0,42,680	0/0:23,0:23:62.57:0,63,903	0/0:25,0:24:54.01:0,54,858	1/1:4,25:29:75.24:1171,75,0	1/1:24,0:24:12.03:132,12,0	0/0:27,0:27:72.10:0,72,1333	0/0:36,0:36:90.30:0,90,1550	0/0:31,0:31:81.25:0,81,1378	0/0:29,0:29:78.24:0,78,1278	0/0:19,0:18:45.13:0,45,691	1/1:33,0:33:12.04:145,12,0	1/1:22,0:22:3.01:44,3,0	0/0:23,0:23:48.39:0,48,706	0/0:20,0:20:54.03:0,54,720	1/1:12,0:12:33.09:475,33,0	1/1:31,0:32:23.72:174,24,0	0/0:19,0:19:45.15:0,45,808	1/1:27,0:27:1.78:9,2,0	0/0:32,0:31:68.45:0,68,1119	0/0:13,0:13:36.11:0,36,608	1/1:38,0:38:9.03:105,9,0	1/1:29,0:29:36.26:988,36,0	1/1:30,0:29:18.06:248,18,0	1/1:13,0:13:6.02:87,6,0
chr10	5722240	.	G	GA	692.33	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-4.347;DP=726;FS=0.000;HRun=7;HaplotypeScore=71.5574;InbreedingCoeff=0.9947;MQ=83.24;MQ0=0;MQRankSum=-3.294;QD=23.08;ReadPosRankSum=0.809;VQSLOD=3.5039;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,105,1000	0/0:20,0:20:57.07:0,57,544	0/0:31,0:31:74.30:0,74,693	0/0:23,0:23:51.04:0,51,443	0/0:20,0:20:57.07:0,57,544	0/0:21,0:21:57.09:0,57,550	0/0:36,0:36:90.12:0,90,863	0/0:30,0:30:78.10:0,78,744	0/0:27,0:27:66.07:0,66,630	0/0:26,0:26:66.09:0,66,634	0/0:21,0:21:60.10:0,60,579	0/0:19,0:19:48.06:0,48,458	0/0:26,0:26:72.10:0,72,689	0/0:38,0:38:99:0,105,1006	0/0:26,0:26:63.08:0,63,603	0/0:19,0:19:26.37:0,26,439	1/1:7,23:30:66.20:787,66,0	0/0:27,1:28:40.75:0,41,645	0/0:23,0:23:66.11:0,66,637	0/0:27,0:27:78.12:0,78,753	0/0:35,0:35:96.09:0,96,912	0/0:20,0:20:54.06:0,54,515	0/0:26,0:26:72.11:0,72,694	0/0:21,0:21:60.10:0,60,579	0/0:24,0:24:59.90:0,60,573	0/0:35,0:35:96.14:0,96,927	0/0:25,0:25:69.11:0,69,666	0/0:7,0:7:21.03:0,21,203
chr10	5724226	.	G	GAA	9049.01	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-10.018;DP=618;FS=2.703;HRun=9;HaplotypeScore=71.7708;InbreedingCoeff=0.9939;MQ=73.03;MQ0=4;MQRankSum=-1.097;QD=34.15;ReadPosRankSum=1.964;VQSLOD=5.2654;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:36:89.90:0,90,993	1/1:0,5:6:15.05:213,15,0	0/0:11,0:11:14.22:0,14,133	0/0:13,0:12:25.06:0,25,279	1/1:4,23:30:74.18:1046,74,0	1/1:4,18:24:59.28:774,59,0	1/1:3,18:22:18.82:670,19,0	0/0:29,0:30:80.90:0,81,828	0/0:28,0:28:78.19:0,78,830	1/1:3,19:23:53.67:794,54,0	1/1:4,14:19:45.11:649,45,0	1/1:5,17:23:54.18:805,54,0	1/1:6,9:15:26.54:353,27,0	1/1:3,16:20:54.18:807,54,0	0/0:23,0:25:68.91:0,69,714	0/0:25,0:25:69.14:0,69,726	0/0:21,0:21:57.14:0,57,607	1/1:0,11:13:38.10:525,38,0	0/0:26,0:26:63.13:0,63,670	0/0:25,0:25:72.16:0,72,757	1/1:3,26:30:72.24:1109,72,0	0/0:20,0:21:59.84:0,60,602	1/1:5,19:24:48.16:721,48,0	1/1:0,12:13:39.13:583,39,0	0/0:26,0:26:64.09:0,64,748	0/0:27,0:27:75.18:0,75,798	0/0:19,0:19:48.10:0,48,510	0/0:18,0:19:48.07:0,48,565
chr10	5725326	.	C	CTGACTTTTCATA	70400.01	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-6.995;DP=549;FS=0.000;HRun=0;HaplotypeScore=140.6407;InbreedingCoeff=0.9235;MQ=84.53;MQ0=0;MQRankSum=-11.235;QD=141.37;ReadPosRankSum=6.119;VQSLOD=5.3284;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,6:13:27.09:1511,27,0	1/1:5,5:13:30.10:1642,30,0	0/0:26,0:26:69.17:0,69,2243	0/0:24,0:25:72.21:0,72,2509	1/1:7,18:28:66.23:3764,66,0	1/1:9,14:27:66.23:3714,66,0	1/1:6,8:16:39.13:2202,39,0	1/1:10,3:17:42.13:1683,42,0	1/1:7,11:20:54.19:3327,54,0	1/1:5,12:21:63.21:3360,63,0	1/1:3,12:19:45.15:2523,45,0	1/1:4,18:26:66.23:4087,66,0	1/1:2,12:15:42.14:2579,42,0	1/1:8,11:22:57.20:3236,57,0	1/1:7,21:33:84.29:4934,84,0	1/1:5,16:24:63.22:3845,63,0	1/1:5,5:12:24.08:1446,24,0	1/1:1,3:10:12.04:644,12,0	1/1:6,4:12:33.09:1654,33,0	1/1:8,18:29:81.28:4707,81,0	1/1:1,2:4:9.03:476,9,0	1/1:4,17:27:57.20:3442,57,0	1/1:7,9:19:48.16:2530,48,0	1/1:2,2:8:9.03:545,9,0	1/1:4,18:30:63.11:3890,63,0	1/1:3,10:16:48.14:2610,48,0	1/1:5,22:31:84.29:5095,84,0	1/1:3,3:6:18.06:955,18,0
chr10	5726262	.	AACACACACACACAC	A	3167.83	PASS	AB=0.882;AC=19;AF=0.352;AN=54;BaseQRankSum=6.674;DP=530;FS=21.192;HRun=0;HaplotypeScore=193.6328;InbreedingCoeff=0.6977;MQ=69.79;MQ0=14;MQRankSum=-7.579;QD=20.44;ReadPosRankSum=-0.066;VQSLOD=1.0848;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:39:26.70:0,27,678	0/0:5,0:5:9.03:0,9,541	0/0:38,0:24:3.01:0,3,46	0/0:34,0:22:6.02:0,6,143	0/0:22,0:22:21.54:0,22,1124	1/1:9,12:21:14.97:393,15,0	1/1:11,7:19:6.02:215,6,0	0/0:21,0:20:6.02:0,6,104	1/1:9,7:16:15.05:587,15,0	0/0:10,0:10:21.07:0,21,1141	0/0:14,0:20:21.37:0,21,1112	0/0:20,0:20:27.09:0,27,1566	0/0:11,0:15:23.57:0,24,774	0/0:9,0:17:18.06:0,18,1087	1/1:11,5:16:6.02:235,6,0	1/1:11,6:17:15.05:586,15,0	0/0:21,0:22:24.54:0,25,489	0/0:28,0:27:36.12:0,36,1906	1/1:9,0:10:3:98,3,0	1/1:9,2:11:6.02:235,6,0	0/0:24,0:30:35.61:0,36,1893	1/1:7,5:12:9.03:338,9,0	./.	0/0:14,0:22:17.72:0,18,779	1/1:10,6:17:15.05:567,15,0	0/1:13,1:15:99:102,0,771	0/0:14,0:18:0.32:0,0,194	0/0:1,0:4:5.98:0,6,45
chr10	5727961	.	AGTGTGT	A	789.58	PASS	AB=0.886;AC=22;AF=0.579;AN=38;BaseQRankSum=3.085;DP=560;FS=3.393;HRun=0;HaplotypeScore=109.1605;InbreedingCoeff=0.5250;MQ=67.39;MQ0=35;MQRankSum=-1.157;QD=3.56;ReadPosRankSum=1.302;VQSLOD=2.1672;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:34:0.10:0,0,0	1/1:4,3:7:9.03:179,9,0	./.	0/0:55,0:25:0:0,0,0	./.	0/0:12,0:15:12.02:0,12,144	0/0:18,0:21:5.16:0,5,79	./.	1/1:12,2:14:7.41:122,7,0	0/0:19,0:19:0.01:0,0,0	./.	1/1:16,2:16:3.01:60,3,0	1/1:9,0:11:2.52:41,3,0	0/1:21,0:21:0:0,0,0	0/0:20,0:23:14.71:0,15,181	1/1:7,2:14:9.56:127,10,0	./.	1/1:11,8:19:15.05:299,15,0	./.	1/1:16,0:16:2.90:16,3,0	./.	1/1:15,1:19:3.89:61,4,0	./.	1/1:32,5:37:0.47:1,0,0	0/0:11,0:13:6.01:0,6,63	0/0:19,0:17:5.63:0,6,16	1/1:9,0:11:1.77:4,2,0	./.
chr10	5730261	.	GGGAGGA	G	14440.19	PASS	AB=0.625;AC=39;AF=0.696;AN=56;BaseQRankSum=-5.673;DP=680;FS=4.368;HRun=0;HaplotypeScore=213.5639;InbreedingCoeff=0.8793;MQ=49.11;MQ0=22;MQRankSum=-8.280;QD=31.32;ReadPosRankSum=4.313;VQSLOD=4.4494;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:43:50.85:0,51,518	1/1:3,5:8:9.03:194,9,0	0/0:26,0:9:14.72:0,15,287	0/0:28,0:10:11.85:0,12,112	1/1:7,13:20:30.02:494,30,0	1/1:5,20:24:47.15:1033,47,0	1/1:9,20:28:42.14:880,42,0	0/0:15,0:31:64.23:0,64,521	0/1:12,18:30:19.18:913,0,19	1/1:8,16:23:20.17:822,20,0	1/1:4,16:20:45.04:848,45,0	1/1:8,17:25:35.03:881,35,0	1/1:6,15:20:38.72:840,39,0	1/1:11,18:29:39.13:840,39,0	1/1:10,21:30:48.16:1034,48,0	1/1:9,15:22:39.13:827,39,0	0/0:15,0:23:23.94:0,24,365	1/1:5,11:16:21.07:425,21,0	1/1:12,11:18:30.78:566,31,0	1/1:8,21:27:60.16:1211,60,0	1/1:14,13:26:9.08:245,9,0	1/1:3,16:19:42.14:865,42,0	1/1:3,16:19:41.40:837,41,0	1/1:8,15:23:15.05:297,15,0	1/1:5,14:19:18.06:388,18,0	0/0:6,0:25:62.29:0,62,462	0/0:10,0:31:67.87:0,68,443	0/0:1,0:7:11.80:0,12,74
chr10	5730737	.	TA	T	12555.39	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=1.288;DP=560;FS=18.531;HRun=8;HaplotypeScore=57.0643;InbreedingCoeff=0.9932;MQ=68.07;MQ0=0;MQRankSum=-5.508;QD=24.52;ReadPosRankSum=3.102;VQSLOD=3.5187;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,37:39:96.15:926,96,0	1/1:0,6:6:15.02:145,15,0	0/0:12,0:12:30.07:0,30,348	0/0:15,0:15:39.05:0,39,419	1/1:2,22:24:63.10:606,63,0	1/1:2,17:19:45.07:435,45,0	1/1:2,20:22:54.09:521,54,0	1/1:5,21:26:63.08:601,63,0	1/1:1,22:23:60.10:579,60,0	1/1:2,21:23:63.10:608,63,0	1/1:0,15:15:42.06:404,42,0	1/1:1,15:16:42.07:406,42,0	1/1:2,18:20:42.06:406,42,0	1/1:0,14:14:36.06:348,36,0	1/1:2,14:16:36.05:348,36,0	1/1:1,16:17:42.07:406,42,0	0/0:21,0:21:57.14:0,57,654	1/1:4,18:22:51.08:492,51,0	1/1:2,19:21:57.09:549,57,0	1/1:0,24:24:71.95:663,72,0	1/1:1,15:16:39.06:376,39,0	1/1:2,22:24:66.10:637,66,0	1/1:1,18:19:48.07:463,48,0	1/1:2,16:18:45.07:435,45,0	1/1:0,22:22:63.10:608,63,0	1/1:0,23:23:66.10:637,66,0	1/1:2,29:31:75.12:724,75,0	1/1:1,11:12:24.04:232,24,0
chr10	5731455	.	GTAA	G	1388.19	PASS	AB=1.000;AC=17;AF=0.340;AN=50;BaseQRankSum=-1.698;DP=267;FS=11.577;HRun=0;HaplotypeScore=58.8301;InbreedingCoeff=0.6364;MQ=84.35;MQ0=1;MQRankSum=4.415;QD=15.25;ReadPosRankSum=2.417;VQSLOD=2.1236;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:10,0:15:19.36:19,0,122	0/0:3,0:5:9:0,9,99	./.	./.	0/0:2,0:5:9.03:0,9,118	1/1:6,7:15:35.98:398,36,0	1/1:2,1:3:3.01:41,3,0	0/0:29,0:29:30.01:0,30,421	1/1:4,5:10:15.02:185,15,0	0/0:7,0:7:3.01:0,3,32	0/0:5,0:6:6.02:0,6,76	0/0:6,0:9:9.03:0,9,118	0/0:5,0:8:15.04:0,15,184	0/0:5,0:5:5.98:0,6,59	1/1:5,5:10:12.04:164,12,0	0/0:11,0:11:15.05:0,15,295	0/0:5,0:15:24.08:0,24,315	0/0:15,0:17:24.06:0,24,303	1/1:9,9:18:27.09:363,27,0	1/1:1,1:2:3.01:41,3,0	0/0:5,0:6:5.98:0,6,59	1/1:2,1:3:3.01:41,3,0	0/0:3,0:3:6.02:0,6,76	./.	1/1:3,10:14:24.05:308,24,0	0/0:3,0:8:14.96:0,15,175	0/0:5,0:8:6.02:0,6,78	0/0:11,0:11:3.01:0,3,40
chr10	5733193	.	C	CT	21404.95	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-7.325;DP=663;FS=20.772;HRun=2;HaplotypeScore=82.0750;InbreedingCoeff=0.9765;MQ=69.47;MQ0=5;MQRankSum=-4.170;QD=37.75;ReadPosRankSum=6.783;VQSLOD=2.7714;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,50:53:99:2027,141,0	1/1:0,4:4:12.04:169,12,0	0/0:46,0:33:66.04:0,66,723	0/0:48,0:29:44.20:0,44,534	1/1:1,13:14:36.12:518,36,0	1/1:1,20:21:51.17:733,51,0	1/1:1,29:30:81.26:1165,81,0	1/1:2,18:20:57.16:774,57,0	1/1:0,21:21:60.20:863,60,0	1/1:3,27:30:84.28:1204,84,0	1/1:0,7:7:21.07:302,21,0	1/1:0,27:27:78.26:1121,78,0	1/1:0,35:35:96.32:1379,96,0	1/1:5,25:30:75.22:1050,75,0	1/1:1,27:28:69.23:992,69,0	1/1:1,24:25:69.23:993,69,0	1/1:1,30:31:68.38:1110,68,0	1/1:4,9:13:26.57:354,27,0	1/1:1,13:13:39.09:516,39,0	1/1:0,12:12:33.11:474,33,0	1/1:1,27:28:72.22:1035,72,0	1/1:2,14:16:42.10:571,42,0	1/1:2,8:10:24.08:346,24,0	1/1:1,32:33:78.26:1122,78,0	1/1:0,15:15:45.15:647,45,0	1/1:0,20:20:60.20:863,60,0	1/1:0,23:23:57.19:819,57,0	1/1:0,7:7:18.06:259,18,0
chr10	5734395	.	A	ATGTG	7508.75	PASS	AB=1.000;AC=45;AF=0.804;AN=56;BaseQRankSum=-2.793;DP=651;FS=1.613;HRun=0;HaplotypeScore=142.9289;InbreedingCoeff=0.5166;MQ=62.23;MQ0=5;MQRankSum=2.168;QD=14.09;ReadPosRankSum=3.125;VQSLOD=4.2106;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:28,11:38:16.33:294,16,0	1/1:8,2:10:2.86:162,3,0	0/0:35,0:26:15.01:0,15,188	0/0:24,0:15:2.99:0,3,23	1/1:6,11:19:21.07:499,21,0	1/1:15,0:15:3.45:22,3,0	0/0:21,0:19:0.25:0,0,1	1/1:36,0:36:37.09:506,37,0	0/1:13,0:13:0:0,0,0	1/1:6,7:13:18.01:301,18,0	1/1:15,12:32:20.54:360,21,0	1/1:11,10:25:17.55:367,18,0	1/1:21,7:28:14.46:716,14,0	1/1:7,12:19:21.07:487,21,0	1/1:16,0:15:0.94:2,1,0	0/0:24,0:24:0.47:0,0,1	1/1:21,0:32:12.51:186,13,0	1/1:12,11:23:26.83:583,27,0	1/1:20,0:20:4.99:25,5,0	0/0:14,0:14:0.47:0,0,1	1/1:19,19:40:23.82:513,24,0	1/1:20,0:20:2.64:23,3,0	1/1:6,8:19:11.67:283,12,0	1/1:13,12:28:11.63:626,12,0	1/1:17,0:17:2.97:20,3,0	1/1:13,12:28:36.09:624,36,0	1/1:9,11:24:23.82:499,24,0	1/1:3,5:10:3.08:410,3,0
chr10	5735139	.	GAAAA	G	3183.06	PASS	AB=0.977;AC=45;AF=0.833;AN=54;BaseQRankSum=-4.717;DP=352;FS=3.709;HRun=5;HaplotypeScore=94.8138;InbreedingCoeff=0.2649;MQ=57.44;MQ0=11;MQRankSum=1.886;QD=10.90;ReadPosRankSum=1.605;VQSLOD=-0.6911;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:14:0.36:21,0,0	1/1:5,0:5:7.26:78,7,0	0/0:23,0:7:12.51:0,13,168	0/1:36,3:16:31.04:31,0,71	0/1:8,0:8:0:0,0,0	1/1:12,0:11:9.43:111,9,0	0/0:13,0:14:2.50:0,2,10	1/1:1,23:23:3.76:673,4,0	1/1:14,0:14:2.87:37,3,0	1/1:0,10:10:17.49:207,17,0	1/1:0,11:11:0.89:2,1,0	1/1:9,0:9:5.11:51,5,0	1/1:8,0:8:12.03:140,12,0	1/1:7,0:7:1.50:33,2,0	0/0:16,1:17:0.32:0,0,1	1/1:13,1:14:16.69:183,17,0	1/1:3,8:11:7.57:92,8,0	0/1:3,0:3:16.19:34,0,16	1/1:8,0:8:18.95:261,19,0	1/1:21,0:22:18.76:368,19,0	1/1:6,0:5:3.01:49,3,0	1/1:16,0:15:11.56:102,12,0	./.	1/1:8,0:8:9.50:129,9,0	1/1:9,0:9:5.91:76,6,0	1/1:12,0:10:5.45:260,5,0	1/1:14,0:13:8.33:114,8,0	1/1:7,0:6:18.06:249,18,0
chr10	5736345	.	GT	G	21353.90	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-5.002;DP=613;FS=7.769;HRun=1;HaplotypeScore=65.7725;InbreedingCoeff=0.9943;MQ=91.91;MQ0=0;MQRankSum=-11.462;QD=37.86;ReadPosRankSum=7.302;VQSLOD=4.4123;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,48:48:99:1695,123,0	1/1:0,7:7:18.06:252,18,0	0/0:24,0:24:62.88:0,63,995	0/0:25,0:25:74.42:0,74,1044	1/1:0,23:23:69.19:935,69,0	1/1:1,25:26:72.23:990,72,0	1/1:0,22:22:51.17:713,51,0	1/1:0,17:17:51.13:690,51,0	1/1:0,22:22:63.21:881,63,0	1/1:0,34:34:96.32:1340,96,0	1/1:0,13:13:39.13:543,39,0	1/1:0,15:15:42.14:586,42,0	1/1:0,29:29:78.26:1084,78,0	1/1:0,29:29:81.27:1124,81,0	1/1:0,21:21:57.19:797,57,0	1/1:0,15:15:42.14:587,42,0	1/1:0,30:30:81.27:1132,81,0	1/1:0,15:15:42.14:587,42,0	1/1:0,15:15:39.11:526,39,0	1/1:0,11:11:30.06:397,30,0	1/1:1,38:39:99:1422,102,0	1/1:0,16:16:39.13:537,39,0	1/1:0,11:11:24.08:333,24,0	1/1:0,28:28:81.27:1132,81,0	1/1:0,13:13:39.13:545,39,0	1/1:0,31:31:90.18:1190,90,0	1/1:0,23:23:63.21:876,63,0	1/1:0,11:11:33.11:461,33,0
chr10	5736463	.	G	GCTCC	13002.69	PASS	AB=0.769;AC=51;AF=0.911;AN=56;BaseQRankSum=-4.067;DP=405;FS=16.031;HRun=0;HaplotypeScore=63.0789;InbreedingCoeff=0.6284;MQ=76.70;MQ0=1;MQRankSum=-0.707;QD=35.62;ReadPosRankSum=1.757;VQSLOD=3.6576;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,18:33:45.11:1051,45,0	1/1:2,4:6:15.05:362,15,0	0/0:16,0:13:18.04:0,18,251	0/0:24,0:18:11.44:0,11,139	1/1:3,2:5:6.02:143,6,0	1/1:6,12:19:33.11:809,33,0	1/1:8,11:20:17.64:442,18,0	1/1:15,4:20:15.04:294,15,0	1/1:4,14:19:42.14:1026,42,0	1/1:6,5:12:21.07:430,21,0	1/1:1,5:6:9.03:220,9,0	1/1:3,5:11:9.03:216,9,0	1/1:3,15:19:45.15:1097,45,0	1/1:2,9:11:27.09:661,27,0	1/1:9,11:20:33.11:810,33,0	1/1:3,12:15:27.09:664,27,0	0/1:7,2:10:3.05:139,0,3	1/1:1,6:7:9.03:221,9,0	1/1:11,4:15:15.01:285,15,0	1/1:8,3:12:10.28:224,10,0	1/1:8,13:21:33.11:805,33,0	1/1:6,6:13:24.08:581,24,0	1/1:6,1:8:6.02:135,6,0	1/1:5,5:10:18.06:428,18,0	1/1:8,10:18:27.09:630,27,0	1/1:6,7:13:27.07:612,27,0	1/1:9,6:14:24.08:570,24,0	1/1:1,3:6:6.02:147,6,0
chr10	5737810	.	TTG	T	1092.45	PASS	AB=0.857;AC=19;AF=0.339;AN=56;BaseQRankSum=-1.829;DP=745;FS=0.000;HRun=0;HaplotypeScore=114.6900;InbreedingCoeff=0.6653;MQ=70.64;MQ0=13;MQRankSum=4.400;QD=4.06;ReadPosRankSum=3.428;VQSLOD=2.2253;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:35,19:53:15.03:162,15,0	0/0:9,0:10:9:0,9,92	0/0:36,0:26:0:0,0,0	0/0:34,0:21:0:0,0,0	0/0:16,0:26:3.01:0,3,36	0/1:15,3:18:8.92:108,0,9	1/1:20,10:30:9.02:98,9,0	0/0:33,0:32:23.79:0,24,242	1/1:19,1:21:5.85:47,6,0	0/0:31,0:31:40.03:0,40,358	0/0:7,0:17:8.50:0,8,60	0/0:23,0:23:38.57:0,39,403	0/0:8,0:17:11.97:0,12,99	0/0:16,0:29:4.55:0,5,31	1/1:17,6:24:17.88:178,18,0	1/1:18,10:28:18.04:196,18,0	0/0:22,0:39:6.95:0,7,69	0/0:12,0:18:12.75:0,13,125	1/1:8,0:7:3.01:32,3,0	1/1:11,7:18:4.28:66,4,0	0/0:39,0:34:34.12:0,34,281	1/1:25,2:27:11.95:113,12,0	0/0:17,0:17:5.89:0,6,64	0/0:16,0:42:2.99:0,3,23	1/1:23,17:41:26.90:276,27,0	0/0:30,0:30:50.48:0,50,459	0/0:14,0:23:24.06:0,24,198	0/0:5,0:10:6:0,6,52
chr10	5739844	.	T	TGTGC	484.25	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.341;DP=570;FS=15.832;HRun=0;HaplotypeScore=142.3203;InbreedingCoeff=0.8694;MQ=52.13;MQ0=11;MQRankSum=-2.295;QD=17.29;ReadPosRankSum=-3.015;VQSLOD=1.5187;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:22,6:26:33.11:579,33,0	0/0:4,0:4:9.03:0,9,158	0/0:30,0:16:40.56:0,41,652	0/0:32,0:17:37:0,37,572	0/0:17,0:17:12.03:0,12,203	0/0:23,0:23:24.08:0,24,412	0/0:16,0:16:15.05:0,15,251	0/0:27,0:27:72.24:0,72,1314	0/0:11,0:11:27.09:0,27,422	0/0:20,0:20:45.15:0,45,853	0/0:10,0:10:18.06:0,18,321	0/0:19,0:19:31.21:0,31,710	0/0:18,0:18:36.12:0,36,597	0/0:17,0:16:33.10:0,33,578	0/0:23,0:23:27.07:0,27,437	0/0:16,0:16:30.09:0,30,503	0/0:28,0:28:20.77:0,21,366	0/0:16,0:15:42.09:0,42,696	0/0:21,0:20:51.07:0,51,818	0/0:22,0:22:30.10:0,30,566	0/0:40,0:38:33.11:0,33,626	0/0:19,0:19:21.07:0,21,388	0/0:22,0:22:27.02:0,27,464	0/0:25,0:24:17.40:0,17,331	0/0:24,0:24:27.08:0,27,428	0/0:19,0:19:51.16:0,51,902	0/0:14,0:14:17.85:0,18,289	0/0:9,0:8:24.08:0,24,441
chr10	5739870	.	TGTGTGTCTGTGTGTGA	T	6862.47	PASS	AB=0.908;AC=44;AF=0.786;AN=56;BaseQRankSum=1.379;DP=574;FS=10.719;HRun=0;HaplotypeScore=185.0133;InbreedingCoeff=0.3522;MQ=42.53;MQ0=16;MQRankSum=1.529;QD=15.60;ReadPosRankSum=2.632;VQSLOD=3.2333;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:11:0.94:0,1,1	1/1:6,0:5:3.01:43,3,0	0/0:40,0:8:18.04:0,18,293	0/0:54,0:15:26.89:0,27,484	1/1:21,0:21:5.89:58,6,0	1/1:11,16:27:9.80:224,10,0	1/1:9,9:18:5.94:43,6,0	1/1:26,0:26:45.11:612,45,0	1/1:2,10:12:18.06:406,18,0	1/1:14,0:14:9.52:108,10,0	1/1:12,0:12:0.47:1,0,0	0/1:17,0:17:5.55:194,0,6	1/1:21,0:21:18.05:448,18,0	1/1:16,0:15:19.11:405,19,0	1/1:3,16:19:9:252,9,0	0/1:5,7:12:29.64:354,0,30	1/1:7,21:28:8.51:315,9,0	0/1:15,0:13:2.68:585,0,3	1/1:14,2:13:25.20:558,25,0	1/1:8,9:17:3.48:71,3,0	0/1:35,0:32:17.97:19,0,18	1/1:6,14:20:2.30:5,2,0	1/1:19,0:19:8.95:81,9,0	0/0:26,0:25:0.46:0,0,2	1/1:6,18:24:19.42:456,19,0	1/1:6,13:19:36.12:910,36,0	1/1:2,9:11:11.76:243,12,0	1/1:14,1:13:29.62:470,30,0
chr10	5739875	.	GTC	G	1077.85	PASS	AB=0.988;AC=41;AF=0.732;AN=56;BaseQRankSum=1.232;DP=539;FS=7.117;HRun=0;HaplotypeScore=143.0913;InbreedingCoeff=0.3208;MQ=41.59;MQ0=19;MQRankSum=2.122;QD=2.71;ReadPosRankSum=-0.569;VQSLOD=2.2084;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:11,1:10:0.47:0,0,1	1/1:7,0:6:2.22:7,2,0	0/0:45,0:8:16.75:0,17,278	0/0:58,0:15:20.49:0,20,319	1/1:21,0:21:2.99:23,3,0	1/1:23,1:24:0.21:21,0,0	0/0:12,0:12:0:0,0,0	1/1:21,0:21:20.42:76,20,0	1/1:11,0:11:13.76:70,14,0	0/1:14,1:15:10.93:22,0,11	0/0:11,1:12:0:0,0,0	1/1:14,2:16:10.78:93,11,0	1/1:18,0:18:3.34:54,3,0	1/1:16,0:15:16.97:111,17,0	1/1:17,0:17:8.32:40,8,0	1/1:12,0:12:13.79:68,14,0	1/1:25,0:25:11.69:68,12,0	0/1:14,0:12:11.22:53,0,11	1/1:13,0:11:21.16:106,21,0	1/1:12,0:12:2.80:13,3,0	1/1:35,0:32:2.90:18,3,0	0/1:18,0:18:0.32:0,0,0	1/1:18,0:18:8.22:45,8,0	0/1:24,0:23:0.04:0,0,1	1/1:22,0:22:10.59:60,11,0	0/1:13,0:13:5.58:109,0,6	1/1:11,0:11:10.43:46,10,0	1/1:15,0:13:2.99:107,3,0
chr10	5739876	.	TCTGTGTGTGAGTGTGC	T	6707.94	PASS	AB=1.000;AC=46;AF=0.821;AN=56;BaseQRankSum=1.650;DP=528;FS=10.079;HRun=0;HaplotypeScore=164.7359;InbreedingCoeff=0.4337;MQ=41.67;MQ0=20;MQRankSum=2.716;QD=17.20;ReadPosRankSum=0.189;VQSLOD=3.3633;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:7:0.94:0,1,2	1/1:7,0:6:3.01:61,3,0	0/0:47,0:8:17.22:0,17,396	0/0:58,0:15:24.86:0,25,456	1/1:8,12:20:6.02:92,6,0	1/1:24,0:24:9.90:174,10,0	1/1:11,0:11:2.60:10,3,0	1/1:19,0:19:38.88:386,39,0	1/1:11,0:11:18.06:325,18,0	1/1:2,12:14:19.52:247,20,0	1/1:13,0:13:0.47:1,0,0	1/1:15,1:16:16.78:353,17,0	1/1:2,15:17:18.06:557,18,0	1/1:13,3:15:18.27:521,18,0	1/1:17,0:17:9:203,9,0	0/1:12,0:12:29.63:274,0,30	0/1:25,0:25:22.38:261,0,22	1/1:11,3:12:15.38:769,15,0	1/1:12,0:10:30:468,30,0	1/1:12,0:12:3.48:52,3,0	1/1:33,0:30:2.99:50,3,0	1/1:18,0:18:2.30:5,2,0	1/1:3,15:18:9.03:135,9,0	0/0:8,16:23:0.90:0,1,2	1/1:21,1:22:18.95:357,19,0	1/1:13,0:13:35.98:697,36,0	1/1:11,0:11:11.21:182,11,0	1/1:15,0:13:36.03:528,36,0
chr10	5739880	.	T	TCC	1741.51	PASS	AB=0.980;AC=27;AF=0.500;AN=54;BaseQRankSum=2.932;DP=535;FS=62.133;HRun=0;HaplotypeScore=145.8155;InbreedingCoeff=0.0226;MQ=41.16;MQ0=22;MQRankSum=1.873;QD=5.92;ReadPosRankSum=1.307;VQSLOD=1.0703;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:15:0.22:0,0,0	0/0:6,0:5:3:0,3,29	0/0:49,0:8:6.44:0,6,276	0/0:61,0:14:31.99:0,32,452	0/0:20,0:20:3.48:0,3,37	1/1:24,0:24:8.13:88,8,0	./.	0/0:20,0:20:34.76:0,35,237	1/1:11,0:11:13.93:152,14,0	0/1:14,0:14:10.21:10,0,65	0/1:9,1:10:0.01:0,0,0	0/1:15,0:15:38.62:90,0,39	1/1:18,0:18:6.48:214,6,0	0/1:15,1:15:42.96:129,0,43	1/1:17,1:18:8.98:87,9,0	0/1:13,0:13:5.85:118,0,6	0/1:25,0:25:24.59:71,0,25	0/1:13,1:12:99:153,0,100	0/1:10,0:8:37.63:38,0,133	1/1:12,0:12:2.86:37,3,0	0/0:27,4:28:2.99:0,3,45	0/0:18,0:18:0.40:0,0,2	1/1:18,0:18:8.62:83,9,0	0/0:25,0:24:2.40:0,2,22	1/1:22,0:22:18.07:213,18,0	0/1:13,0:13:99:274,0,102	0/1:11,0:11:23.56:32,0,24	0/1:13,0:11:99:109,0,137
chr10	5739884	.	TGA	T	2420.70	PASS	AB=0.852;AC=44;AF=0.786;AN=56;BaseQRankSum=2.026;DP=544;FS=6.447;HRun=0;HaplotypeScore=141.9419;InbreedingCoeff=0.3903;MQ=41.24;MQ0=22;MQRankSum=3.915;QD=6.13;ReadPosRankSum=1.591;VQSLOD=2.9022;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:15,0:14:0.04:1,0,0	1/1:1,5:5:3.01:43,3,0	0/0:52,0:8:6.49:0,6,333	0/0:62,0:15:33.52:0,34,472	1/1:15,5:20:5.61:47,6,0	0/0:18,6:24:0.25:0,0,2	1/1:9,2:11:2.94:18,3,0	1/1:0,23:23:53.98:662,54,0	1/1:10,1:11:5.95:53,6,0	1/1:14,0:14:11.86:99,12,0	0/0:7,4:11:0:0,0,0	1/1:12,5:17:12.63:91,13,0	1/1:16,2:18:12.13:88,12,0	1/1:11,4:14:18.11:148,18,0	1/1:19,0:19:2.88:18,3,0	1/1:9,4:13:7.11:69,7,0	1/1:24,1:25:8.88:58,9,0	0/1:10,5:13:16.95:193,0,17	1/1:5,5:8:23.90:265,24,0	0/1:9,3:12:0:0,0,0	1/1:20,10:27:2.96:25,3,0	0/1:15,3:18:0.47:1,0,0	1/1:15,3:18:2.63:18,3,0	1/1:20,6:25:5.69:49,6,0	1/1:20,2:22:3.22:15,3,0	1/1:13,0:13:21.72:228,22,0	1/1:10,1:11:8.86:93,9,0	1/1:11,2:11:28.09:263,28,0
chr10	5739890	.	TGC	T	1186.42	PASS	AB=1.000;AC=41;AF=0.732;AN=56;BaseQRankSum=4.976;DP=568;FS=2.445;HRun=0;HaplotypeScore=153.4735;InbreedingCoeff=0.3907;MQ=41.87;MQ0=21;MQRankSum=0.595;QD=3.12;ReadPosRankSum=4.368;VQSLOD=2.2557;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:16:8.48:0,8,58	1/1:8,0:7:6:67,6,0	0/0:53,0:8:17.15:0,17,294	0/0:63,0:16:32.25:0,32,393	1/1:19,0:19:3.01:36,3,0	0/0:25,0:25:1.02:0,1,3	1/1:13,0:13:2.07:8,2,0	0/1:27,0:27:52.67:53,0,179	1/1:11,0:11:5.12:20,5,0	1/1:14,0:14:15.74:123,16,0	0/0:10,0:10:0:0,0,0	1/1:17,0:17:14.66:96,15,0	1/1:19,0:19:14.60:99,15,0	1/1:16,1:16:17.13:142,17,0	1/1:19,0:19:3.07:10,3,0	1/1:13,0:13:5.62:31,6,0	0/1:27,0:27:15.51:16,0,90	1/1:17,1:16:19.11:231,19,0	1/1:11,0:10:6.48:79,6,0	0/1:12,0:12:0:0,0,0	1/1:30,2:30:5.95:49,6,0	0/0:20,0:20:0.36:0,0,2	1/1:18,0:18:2.63:18,3,0	1/1:27,0:26:5.20:50,5,0	1/1:22,0:22:3.04:11,3,0	1/1:13,0:13:6.12:47,6,0	1/1:11,0:11:3.95:12,4,0	1/1:12,0:10:19.60:134,20,0
chr10	5739898	.	CGT	C	918.41	PASS	AB=0.853;AC=32;AF=0.593;AN=54;BaseQRankSum=1.272;DP=565;FS=11.382;HRun=0;HaplotypeScore=155.1040;InbreedingCoeff=0.1016;MQ=39.67;MQ0=21;MQRankSum=1.009;QD=2.51;ReadPosRankSum=0.210;VQSLOD=2.2163;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:8,0:16:12.21:58,12,0	1/1:2,6:7:11.85:95,12,0	./.	0/0:53,0:10:2.98:0,3,21	1/1:15,4:20:9.02:97,9,0	0/0:19,0:25:2.92:0,3,18	1/1:15,0:16:6.73:29,7,0	0/1:29,1:30:5.03:5,0,280	1/1:12,0:13:5.64:27,6,0	1/1:12,1:14:11.76:84,12,0	0/0:6,4:11:0:0,0,0	0/1:6,9:18:1.55:58,0,2	1/1:15,3:18:8.97:86,9,0	0/1:10,7:18:67.71:86,0,68	1/1:17,0:19:1.36:2,1,0	1/1:9,0:14:2.96:15,3,0	1/1:25,0:28:5.53:28,6,0	1/1:9,9:17:16.35:165,16,0	0/1:13,0:14:10.51:11,0,26	0/0:9,1:12:0.99:0,1,3	0/1:32,3:33:14.28:48,0,14	0/0:15,0:20:5.68:0,6,64	0/0:13,2:16:0:0,0,0	1/1:17,9:26:5.72:67,6,0	0/0:19,0:22:0.83:0,1,3	0/1:15,1:16:15.75:16,0,189	0/1:8,1:8:10.64:28,0,11	0/1:11,2:11:52.57:53,0,146
chr10	5740822	.	T	TG	852.10	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-0.585;DP=508;FS=12.077;HRun=5;HaplotypeScore=85.4986;InbreedingCoeff=0.9486;MQ=89.81;MQ0=0;MQRankSum=-3.890;QD=29.38;ReadPosRankSum=0.237;VQSLOD=3.0117;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,26:29:72.23:947,72,0	0/0:11,0:11:30.08:0,30,322	0/0:22,0:22:18.83:0,19,439	0/0:28,0:28:65.17:0,65,703	0/0:9,0:9:21.05:0,21,226	0/0:19,0:19:41.84:0,42,427	0/0:33,0:33:90.22:0,90,965	0/0:24,0:24:43.23:0,43,624	0/0:11,0:11:30.07:0,30,321	0/0:23,0:23:66.15:0,66,706	0/0:8,0:8:12.03:0,12,129	0/0:21,0:21:48.12:0,48,515	0/0:11,0:11:24.02:0,24,245	0/0:21,0:21:51.12:0,51,547	0/0:11,0:11:26.74:0,27,282	0/0:16,0:16:33.06:0,33,346	0/0:24,0:24:63.14:0,63,666	0/0:19,0:19:48.10:0,48,506	0/0:15,0:15:42.10:0,42,450	0/0:16,0:16:45.11:0,45,482	0/0:33,0:33:84.20:0,84,896	0/0:10,0:10:24.06:0,24,258	0/0:9,0:9:24.06:0,24,258	0/0:22,0:22:51.12:0,51,548	0/0:25,0:25:63.14:0,63,669	0/0:20,0:20:51.12:0,51,541	0/0:10,0:10:24.06:0,24,257	0/0:8,0:8:24.06:0,24,257
chr10	5740873	.	C	CTT	5214.86	PASS	AB=0.652;AC=43;AF=0.768;AN=56;BaseQRankSum=-0.634;DP=486;FS=7.961;HRun=14;HaplotypeScore=107.9598;InbreedingCoeff=0.8058;MQ=67.25;MQ0=1;MQRankSum=-3.539;QD=14.06;ReadPosRankSum=-1.514;VQSLOD=3.1958;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:28:13.55:188,14,0	1/1:5,0:14:20.99:213,21,0	0/0:11,0:7:3.81:0,4,42	0/0:15,0:13:10.29:0,10,73	1/1:12,2:19:27.01:277,27,0	1/1:6,7:16:25.80:277,26,0	1/1:7,13:20:33.11:425,33,0	0/0:35,0:39:35.39:0,35,465	1/1:4,9:14:30.34:356,30,0	1/1:14,0:19:16.85:163,17,0	1/1:6,1:15:24.26:230,24,0	1/1:11,2:18:14.40:144,14,0	1/1:6,1:14:18.03:189,18,0	1/1:13,0:19:16.84:158,17,0	1/1:3,1:12:8.35:67,8,0	1/1:5,2:11:17.41:181,17,0	1/1:2,12:16:26.45:322,26,0	1/1:3,0:12:21.03:206,21,0	1/1:9,6:18:25.77:245,26,0	1/1:7,12:21:42.62:448,43,0	0/1:7,2:15:5.82:146,0,6	1/1:5,4:18:6.09:220,6,0	1/1:8,0:14:18.04:194,18,0	1/1:2,1:8:6.01:68,6,0	1/1:10,14:30:26.62:498,27,0	0/0:24,0:27:27.19:0,27,220	0/0:11,0:15:17.48:0,17,179	0/0:7,0:7:14.95:0,15,125
chr10	5742918	.	TA	T	8201.07	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=1.244;DP=570;FS=4.444;HRun=9;HaplotypeScore=102.6483;InbreedingCoeff=0.9850;MQ=70.36;MQ0=0;MQRankSum=-0.044;QD=23.50;ReadPosRankSum=2.441;VQSLOD=5.0302;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,44:44:99:1107,123,0	1/1:0,3:3:9:82,9,0	0/0:9,0:9:15.79:0,16,228	0/0:12,0:12:26.95:0,27,273	1/1:1,22:23:56.91:503,57,0	0/0:25,0:25:72.15:0,72,813	0/0:16,0:16:33.10:0,33,381	1/1:1,18:19:54.01:490,54,0	0/0:21,0:21:57.16:0,57,648	1/1:1,23:24:69.03:627,69,0	1/1:4,23:27:59.82:534,60,0	1/1:3,17:20:51.02:467,51,0	1/1:2,22:24:49.19:584,49,0	1/1:1,23:24:66.03:604,66,0	0/0:28,0:28:84.20:0,84,942	0/0:20,0:20:51.15:0,51,589	1/1:3,22:25:59.97:539,60,0	1/1:1,14:15:39.02:357,39,0	0/0:25,0:25:75.21:0,75,855	0/0:24,0:24:63.12:0,63,700	1/1:5,22:27:60.03:549,60,0	0/0:14,0:13:30.09:0,30,346	1/1:3,13:16:39.02:357,39,0	1/1:1,21:22:57.03:522,57,0	0/0:27,0:27:72.20:0,72,820	1/1:2,16:18:48.02:439,48,0	1/1:1,13:14:36.02:329,36,0	1/1:0,4:4:12.01:110,12,0
chr10	5746223	.	C	CAGAGAGAGAGAG	3180.89	PASS	AB=0.989;AC=27;AF=0.540;AN=50;BaseQRankSum=-8.294;DP=522;FS=54.865;HRun=0;HaplotypeScore=234.3193;InbreedingCoeff=0.4334;MQ=44.56;MQ0=15;MQRankSum=5.165;QD=10.50;ReadPosRankSum=4.337;VQSLOD=0.9367;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:0.90:0,1,3	1/1:8,0:8:6.02:168,6,0	./.	./.	1/1:23,1:24:12.01:190,12,0	0/0:15,0:15:1.25:0,1,3	0/1:13,0:11:0:0,0,0	0/0:20,0:13:15.01:0,15,199	0/0:8,0:8:3.48:0,3,90	1/1:25,0:25:42.12:770,42,0	1/1:23,0:23:26.81:477,27,0	1/1:15,8:26:3.46:118,3,0	1/1:20,0:20:5.89:90,6,0	1/1:17,0:15:4.63:91,5,0	0/1:10,0:9:0:0,0,0	0/0:26,0:26:19.92:0,20,361	0/1:16,0:17:26.58:27,0,45	1/1:11,0:11:12.04:298,12,0	./.	0/0:21,0:21:2.30:0,2,6	1/1:24,0:21:9:156,9,0	0/0:24,0:24:4.52:0,5,12	1/1:20,0:20:12.04:248,12,0	1/1:30,0:30:22.92:545,23,0	0/0:18,0:18:0:0,0,0	0/0:19,0:20:34.88:0,35,604	0/1:11,0:14:14.82:15,0,57	0/1:15,0:18:99:141,0,178
chr10	5746237	.	GAGAGAGAGAGAGAGAGAGAC	G	371.95	PASS	AB=0.943;AC=15;AF=0.278;AN=54;BaseQRankSum=5.649;DP=480;FS=38.176;HRun=0;HaplotypeScore=253.2874;InbreedingCoeff=0.2131;MQ=39.80;MQ0=19;MQRankSum=-5.391;QD=2.37;ReadPosRankSum=-4.455;VQSLOD=0.8156;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,0:8:0.89:2,1,0	0/0:10,0:10:18.06:0,18,975	./.	0/0:14,0:7:11.97:0,12,149	0/0:26,0:26:27.09:0,27,1268	0/0:9,0:9:1.03:0,1,40	0/1:6,1:5:0.01:0,0,0	0/0:23,0:16:38.90:0,39,439	0/1:8,0:8:16.92:151,0,17	0/0:28,0:27:78.22:0,78,3006	0/0:24,0:23:39.13:0,39,1247	0/0:28,0:28:19.30:0,19,817	0/0:16,0:16:18.06:0,18,790	0/0:16,0:14:19.04:0,19,482	1/1:19,0:17:1.25:3,1,0	0/1:22,1:23:72.52:73,0,379	0/0:17,0:17:24.47:0,24,1360	0/0:10,0:10:24.08:0,24,883	0/1:7,3:8:59.82:60,0,78	0/1:14,0:14:13.32:13,0,78	0/0:23,0:20:32.92:0,33,1689	1/1:20,2:21:7.42:19,7,0	0/0:26,0:26:36.12:0,36,2210	0/0:35,0:33:45.76:0,46,2000	1/1:10,1:11:3.90:59,4,0	0/1:19,0:19:64.29:64,0,511	0/0:12,0:12:23.68:0,24,427	0/1:15,0:15:68.51:69,0,490
chr10	5746243	.	GAGAGAGAGAGAGAC	G	1472	PASS	AB=1.000;AC=20;AF=0.370;AN=54;BaseQRankSum=6.207;DP=557;FS=20.025;HRun=0;HaplotypeScore=252.0286;InbreedingCoeff=0.1966;MQ=39.39;MQ0=39;MQRankSum=-6.559;QD=5.82;ReadPosRankSum=-4.257;VQSLOD=0.5662;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:15:5.07:24,5,0	0/0:9,0:9:18.06:0,18,645	./.	0/0:21,0:4:2.90:0,3,16	0/0:27,0:27:36.07:0,36,889	0/1:14,0:14:15.40:34,0,15	1/1:14,1:13:2.79:26,3,0	0/1:27,0:19:19.20:204,0,19	1/1:9,0:9:8.80:125,9,0	0/0:29,0:28:75.23:0,75,1975	0/0:25,0:24:36.09:0,36,791	0/0:25,0:25:15.80:0,16,504	0/0:16,0:16:18.03:0,18,583	0/0:22,0:20:39.42:0,39,399	1/1:8,12:18:1.25:3,1,0	0/1:29,0:29:99:141,0,191	0/0:18,0:18:27.01:0,27,937	0/0:10,0:10:21.05:0,21,586	0/1:12,0:8:34.94:35,0,42	0/1:20,0:20:41.84:54,0,42	0/0:26,0:22:38.97:0,39,1165	1/1:25,0:24:8.96:39,9,0	0/0:26,0:26:39.03:0,39,1508	0/0:36,0:34:47.94:0,48,1388	1/1:14,0:14:3.90:39,4,0	0/1:24,0:24:43.96:591,0,44	0/1:13,0:13:89.29:89,0,123	0/1:15,0:15:99:234,0,199
chr10	5746251	.	GAGAGAC	G	1634.56	PASS	AB=0.968;AC=25;AF=0.481;AN=52;BaseQRankSum=8.357;DP=577;FS=1.714;HRun=0;HaplotypeScore=217.5696;InbreedingCoeff=0.7352;MQ=39.96;MQ0=55;MQRankSum=-7.280;QD=6.31;ReadPosRankSum=-0.704;VQSLOD=2.7334;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:15:2.94:19,3,0	0/0:11,0:11:21.48:0,21,283	./.	./.	0/0:33,0:33:44.91:0,45,509	1/1:15,0:15:8.25:65,8,0	1/1:17,0:15:6.73:52,7,0	1/1:31,0:20:27.23:215,27,0	1/1:10,0:10:8.97:83,9,0	0/0:29,0:28:67.79:0,68,765	0/0:25,0:24:18.64:0,19,289	0/0:24,0:24:14.88:0,15,201	0/0:18,0:18:17.97:0,18,272	0/0:21,0:19:32.25:0,32,241	0/1:20,0:18:0:0,0,0	0/1:25,3:28:1.90:182,0,2	0/0:16,0:16:12.34:0,12,360	0/0:11,0:11:12.39:0,12,246	1/1:11,0:7:5.97:47,6,0	1/1:20,0:20:17.45:128,17,0	0/0:25,0:22:44.77:0,45,496	1/1:26,1:26:12.82:84,13,0	0/0:25,0:25:36.91:0,37,673	0/0:39,0:37:50.25:0,50,542	1/1:9,7:16:3.83:20,4,0	1/1:17,0:21:40.54:527,41,0	1/1:9,0:11:17.97:174,18,0	0/1:16,0:16:16.23:230,0,16
chr10	5746253	.	GAGAC	G	1382.03	PASS	AB=1.000;AC=27;AF=0.500;AN=54;BaseQRankSum=8.900;DP=579;FS=1.967;HRun=0;HaplotypeScore=201.6319;InbreedingCoeff=0.8465;MQ=40.20;MQ0=56;MQRankSum=-6.252;QD=5.25;ReadPosRankSum=-1.712;VQSLOD=2.2649;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:15:2.94:18,3,0	0/0:11,0:11:17.99:0,18,191	./.	0/0:27,0:1:2.74:0,3,12	0/0:33,0:33:41.93:0,42,421	1/1:14,0:14:8.93:66,9,0	1/1:17,0:15:6.75:52,7,0	1/1:33,0:23:26.91:214,27,0	1/1:10,1:11:11.96:104,12,0	0/0:27,0:26:39.02:0,39,415	0/0:25,0:24:17.96:0,18,187	0/0:23,0:23:14.34:0,14,158	0/0:17,0:17:11.98:0,12,166	0/0:23,0:21:32.31:0,32,247	0/1:20,0:18:0:0,0,0	1/1:30,0:30:28.21:212,28,0	0/0:12,0:15:18.03:0,18,287	0/0:11,0:11:14.99:0,15,196	1/1:12,0:8:8.98:74,9,0	1/1:18,2:20:14.92:118,15,0	0/0:23,0:21:32.82:0,33,335	1/1:25,3:27:14.05:105,14,0	0/0:25,0:25:35.97:0,36,514	0/0:39,0:37:38.87:0,39,384	1/1:15,0:15:3.83:20,4,0	1/1:21,0:21:29.45:371,29,0	1/1:10,0:10:11.95:98,12,0	1/1:16,0:16:19.19:134,19,0
chr10	5746255	.	GAC	G	1710.73	PASS	AB=0.959;AC=32;AF=0.615;AN=52;BaseQRankSum=9.507;DP=577;FS=8.401;HRun=0;HaplotypeScore=185.1945;InbreedingCoeff=0.1370;MQ=40.38;MQ0=58;MQRankSum=-5.404;QD=4.02;ReadPosRankSum=-2.014;VQSLOD=2.0239;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:16,1:16:2.88:18,3,0	0/1:10,0:10:2.96:3,0,129	./.	0/0:29,0:1:2.74:0,3,12	0/1:31,1:32:1.05:1,0,305	1/1:12,1:13:8.84:66,9,0	1/1:17,0:15:6.83:52,7,0	0/1:16,0:23:50.10:173,0,50	1/1:9,2:11:11.91:103,12,0	0/1:27,0:26:20.29:20,0,298	0/1:24,1:24:75.22:75,0,143	0/0:22,0:22:0.79:0,1,120	0/0:18,0:18:20.14:0,20,163	0/0:22,0:20:10.61:0,11,222	./.	1/1:25,5:31:7.14:320,7,0	0/1:15,0:15:4.38:4,0,168	0/1:12,0:12:24.33:24,0,144	1/1:11,0:7:8.96:74,9,0	1/1:18,1:19:20.84:169,21,0	0/0:22,0:20:31.68:0,32,287	1/1:26,2:27:11.73:100,12,0	0/1:24,0:24:5.81:6,0,308	0/1:38,0:36:29.15:29,0,288	1/1:14,0:14:3.83:20,4,0	0/1:23,0:23:13.42:300,0,13	1/1:10,0:10:20.16:129,20,0	1/1:15,1:16:30.59:187,31,0
chr10	5746313	.	G	GAC	4194.10	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=5.110;DP=761;FS=5.651;HRun=0;HaplotypeScore=233.8091;InbreedingCoeff=0.9253;MQ=53.97;MQ0=29;MQRankSum=-4.845;QD=11.65;ReadPosRankSum=-2.000;VQSLOD=2.3243;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:22,1:23:17.04:137,17,0	0/0:11,0:11:30.07:0,30,351	0/0:48,0:11:8.16:0,8,121	0/0:96,0:29:3.27:0,3,210	0/0:27,0:27:72.12:0,72,824	1/1:15,0:14:22.63:96,23,0	1/1:22,0:22:17.73:154,18,0	1/1:13,32:41:95.66:1043,96,0	1/1:8,0:7:9.98:49,10,0	0/0:33,0:32:90.68:0,91,1012	0/0:13,0:13:30.09:0,30,373	0/0:19,0:19:39.81:0,40,465	0/0:17,0:16:33.06:0,33,389	0/0:26,0:26:65.74:0,66,725	1/1:17,0:17:1.33:4,1,0	1/1:28,0:28:28.64:162,29,0	1/1:24,0:23:49.52:333,50,0	0/0:12,0:12:26.82:0,27,294	1/1:20,0:15:18.62:127,19,0	1/1:23,0:23:10.58:102,11,0	0/0:32,0:31:57.01:0,57,651	1/1:31,1:32:38.50:237,38,0	0/0:28,0:28:59.81:0,60,622	0/0:38,0:39:72.01:0,72,819	1/1:24,0:24:18.15:99,18,0	1/1:30,2:32:77.26:778,77,0	1/1:19,1:20:50.35:413,50,0	1/1:23,4:27:60.03:461,60,0
chr10	5746333	.	GAGAC	G	9197.56	PASS	AB=0.991;AC=53;AF=0.946;AN=56;BaseQRankSum=-1.385;DP=788;FS=29.682;HRun=0;HaplotypeScore=227.0831;InbreedingCoeff=0.6029;MQ=56.23;MQ0=38;MQRankSum=1.074;QD=12.63;ReadPosRankSum=4.986;VQSLOD=2.7622;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:20:11.12:64,11,0	1/1:3,10:13:21.07:346,21,0	0/0:60,0:9:16.76:0,17,105	0/1:105,0:28:7.75:8,0,21	1/1:11,20:31:33.09:551,33,0	1/1:16,0:15:21.54:351,22,0	1/1:20,0:20:12.43:96,12,0	1/1:33,2:29:35.48:378,35,0	1/1:10,0:9:5.96:99,6,0	1/1:16,21:36:74.98:1002,75,0	1/1:5,10:15:20.88:350,21,0	1/1:4,18:22:33.08:550,33,0	1/1:6,11:16:15.02:251,15,0	1/1:10,18:28:30.10:501,30,0	1/1:12,0:12:0.41:1,0,0	1/1:27,0:27:23.76:352,24,0	1/1:27,0:26:43.44:255,43,0	1/1:4,11:15:14.50:250,14,0	1/1:21,0:17:23.92:245,24,0	1/1:26,0:25:27.17:312,27,0	1/1:9,26:33:33.01:551,33,0	1/1:30,0:30:28.17:431,28,0	1/1:6,15:21:18.06:301,18,0	1/1:12,25:37:39.08:650,39,0	1/1:25,0:25:30.12:412,30,0	1/1:27,0:26:20.22:301,20,0	1/1:28,0:27:44.26:280,44,0	1/1:25,0:25:44.35:310,44,0
chr10	5746335	.	GAC	G	6363.19	PASS	AB=1.000;AC=40;AF=0.714;AN=56;BaseQRankSum=9.133;DP=773;FS=3.779;HRun=0;HaplotypeScore=216.6043;InbreedingCoeff=-0.1074;MQ=55.64;MQ0=38;MQRankSum=-2.665;QD=9.05;ReadPosRankSum=9.159;VQSLOD=3.8991;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:2,20:21:14.85:209,15,0	0/1:12,0:12:47.95:76,0,48	0/0:58,0:9:22.82:0,23,181	0/1:102,0:25:8.38:8,0,90	0/1:29,0:29:93.38:93,0,199	1/1:8,8:15:19.81:156,20,0	1/1:17,1:19:6.53:105,7,0	1/1:31,6:29:75.03:744,75,0	1/1:1,4:9:4.88:41,5,0	0/1:36,0:35:99:331,0,183	0/1:15,0:15:63.58:64,0,69	0/1:22,0:22:3.17:111,0,3	0/1:17,0:16:40:40,0,114	0/1:28,0:28:92.48:92,0,205	0/0:7,4:11:0.75:0,1,3	1/1:14,11:27:25.77:185,26,0	1/1:1,26:26:48.15:710,48,0	0/1:15,0:15:47.68:48,0,53	1/1:8,3:16:19.81:178,20,0	1/1:12,12:25:22.19:181,22,0	0/1:35,0:33:90.46:115,0,90	1/1:9,13:29:27.34:225,27,0	0/1:21,0:21:47.53:48,0,152	0/1:35,0:35:99:134,0,151	1/1:10,14:25:19.69:196,20,0	1/1:3,23:25:65.32:805,65,0	1/1:2,26:28:51.07:710,51,0	1/1:6,18:24:54.16:755,54,0
chr10	5746339	.	GAC	G	1340.84	PASS	AB=0.933;AC=28;AF=0.500;AN=56;BaseQRankSum=6.644;DP=751;FS=2.428;HRun=0;HaplotypeScore=225.9842;InbreedingCoeff=-0.3846;MQ=55.21;MQ0=35;MQRankSum=-3.026;QD=2.18;ReadPosRankSum=9.641;VQSLOD=1.3060;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:22:1.09:13,1,0	0/1:12,0:12:25.29:25,0,65	0/0:59,0:11:29.74:0,30,397	0/1:94,0:23:19.73:20,0,62	0/1:27,0:27:36.38:36,0,176	0/1:6,8:13:12.71:132,0,13	0/1:17,1:18:45.82:46,0,103	0/0:36,0:27:17.36:0,17,164	0/1:6,4:9:11.80:34,0,12	0/1:33,0:32:48.81:49,0,282	0/1:14,0:14:28.23:28,0,47	0/1:20,0:20:15.60:51,0,16	0/1:20,0:19:6.75:7,0,223	0/1:26,0:26:35.24:35,0,139	0/0:9,4:13:2.45:0,2,21	1/1:19,11:30:28.15:205,28,0	0/1:24,0:23:1.84:30,0,2	0/1:14,0:14:22.41:22,0,28	1/1:14,3:15:7.78:150,8,0	0/1:13,11:23:3.09:150,0,3	0/1:36,0:34:39.33:39,0,135	0/1:15,13:28:25.63:161,0,26	0/1:22,0:22:11.69:12,0,221	0/1:36,0:36:51.04:51,0,110	1/1:9,14:23:15.89:192,16,0	0/1:26,0:25:4.53:5,0,195	0/0:28,0:27:23.45:0,23,98	0/1:22,0:22:5.87:6,0,59
chr10	5746352	.	ACAGT	A	3632.40	PASS	AB=0.987;AC=22;AF=0.393;AN=56;BaseQRankSum=-0.055;DP=697;FS=0.846;HRun=0;HaplotypeScore=227.4067;InbreedingCoeff=-0.3737;MQ=59.88;MQ0=20;MQRankSum=-1.381;QD=8.07;ReadPosRankSum=8.016;VQSLOD=2.1291;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:23:13.18:0,13,71	1/1:10,0:10:20.97:180,21,0	0/0:48,0:10:24.89:0,25,336	0/0:78,0:29:15.90:0,16,223	0/1:24,0:24:7:278,0,7	0/1:17,0:17:69.40:185,0,69	0/0:11,0:11:5.71:0,6,51	0/1:32,0:26:69.60:70,0,149	0/1:12,0:11:26.02:50,0,26	0/1:28,2:30:27.87:465,0,28	0/1:14,1:15:31.18:146,0,31	0/1:27,0:27:89.90:250,0,90	0/1:17,0:16:80.93:102,0,81	0/1:22,0:22:50.91:251,0,51	0/0:11,0:11:8.94:0,9,71	0/1:30,1:31:99:185,0,99	0/0:23,0:22:28.06:0,28,93	0/1:15,0:15:18.03:125,0,18	0/1:15,0:15:59.21:59,0,64	0/1:26,1:26:88.59:113,0,89	0/1:38,0:37:99:242,0,113	1/1:21,1:22:11.89:285,12,0	0/1:18,0:18:47.98:129,0,48	0/1:35,0:35:46.03:295,0,46	0/1:22,1:23:38.93:211,0,39	0/1:20,0:19:11.34:11,0,67	0/0:31,0:30:41.74:0,42,217	0/0:21,0:21:2.55:0,3,123
chr10	5746471	.	GACACACAC	G	1577.31	PASS	AB=0.956;AC=12;AF=0.240;AN=50;BaseQRankSum=-4.070;DP=655;FS=0.734;HRun=0;HaplotypeScore=180.6248;InbreedingCoeff=0.6288;MQ=48.23;MQ0=30;MQRankSum=-0.172;QD=11.86;ReadPosRankSum=0.106;VQSLOD=2.6152;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:20:18.06:0,18,395	0/0:14,0:14:10.59:0,11,191	0/0:35,0:11:15.05:0,15,416	0/0:67,0:18:14.47:0,14,246	0/0:6,0:19:6.02:0,6,94	./.	./.	0/0:34,0:26:45.15:0,45,1030	./.	0/0:19,0:19:51.17:0,51,1149	0/0:6,0:22:3.01:0,3,68	0/0:7,0:22:14.22:0,14,269	0/0:9,0:24:8.96:0,9,103	0/0:7,0:20:13.86:0,14,271	1/1:12,3:16:13.73:392,14,0	1/1:26,4:29:15.45:289,15,0	0/0:24,0:24:26.86:0,27,496	0/1:9,0:15:90.58:91,0,334	1/1:12,1:9:11.36:147,11,0	0/1:28,1:29:11.60:134,0,12	0/0:36,0:36:46.50:0,46,1401	1/1:12,4:16:18.05:423,18,0	0/0:25,0:25:11.99:0,12,200	0/0:24,0:23:24.07:0,24,675	1/1:10,2:12:3.43:264,3,0	0/0:5,0:21:48.15:0,48,1194	0/0:15,0:17:6.89:0,7,64	0/0:15,0:14:24.08:0,24,771
chr10	5746481	.	CACACACACAG	C	1213.66	PASS	AB=0.958;AC=12;AF=0.222;AN=54;BaseQRankSum=-2.804;DP=635;FS=0.682;HRun=0;HaplotypeScore=181.8706;InbreedingCoeff=0.1378;MQ=46.74;MQ0=31;MQRankSum=0.844;QD=6.26;ReadPosRankSum=0.677;VQSLOD=2.7635;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:23:24.06:0,24,462	0/0:15,0:15:14.22:0,14,211	0/0:26,0:6:15.05:0,15,416	0/0:56,0:11:14.04:0,14,260	0/1:24,0:24:26.59:27,0,94	0/0:17,0:17:2.99:0,3,24	./.	0/0:28,0:21:53.92:0,54,1061	1/1:12,0:12:2.80:13,3,0	0/0:25,0:25:44.06:0,44,1148	0/0:26,0:25:9.02:0,9,136	0/0:21,0:20:13.85:0,14,260	0/0:21,0:20:8.95:0,9,103	0/0:20,0:20:18.39:0,18,271	0/1:13,0:13:1.92:334,0,2	0/1:13,13:25:33.87:197,0,34	0/1:22,0:22:4:4,0,475	0/1:18,0:16:87.57:88,0,345	0/1:16,0:11:51.42:71,0,51	1/1:10,17:27:8.32:65,8,0	0/0:41,0:37:48.88:0,49,1405	0/1:18,0:17:3.90:402,0,4	0/0:26,0:26:14.87:0,15,195	0/0:30,0:29:31.70:0,32,735	0/1:18,0:18:99:158,0,129	0/0:22,0:21:50.75:0,51,1457	0/0:17,0:17:6.89:0,7,64	0/0:9,0:8:24.08:0,24,778
chr10	5746489	.	C	CACACACACAGAG	5147.80	PASS	AB=1.000;AC=22;AF=0.393;AN=56;BaseQRankSum=-5.759;DP=647;FS=46.192;HRun=0;HaplotypeScore=187.6201;InbreedingCoeff=-0.0050;MQ=44.03;MQ0=38;MQRankSum=-3.365;QD=13.23;ReadPosRankSum=2.130;VQSLOD=2.4214;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:24:24.50:324,25,0	0/1:14,0:15:36.86:131,0,37	0/0:22,0:3:9:0,9,132	0/0:50,0:6:3.01:0,3,57	0/0:25,0:25:14.97:0,15,140	0/0:21,0:20:3.01:0,3,44	0/0:17,0:17:4.25:0,4,32	1/1:27,0:20:32.99:501,33,0	0/0:13,0:13:3.01:0,3,42	0/1:25,0:25:77.46:751,0,77	0/1:27,0:26:40.68:58,0,41	0/1:21,0:20:17.43:27,0,17	0/0:20,0:19:5.14:0,5,61	0/1:21,0:21:55.81:68,0,56	0/1:13,0:13:4.45:4,0,289	0/0:28,0:27:21.54:0,22,387	0/1:20,0:20:56.48:233,0,56	0/1:19,0:17:99:112,0,125	0/1:18,0:13:14.34:14,0,255	0/0:21,0:23:8.63:0,9,210	0/1:43,0:38:99:734,0,110	0/0:21,0:20:21.07:0,21,403	0/1:26,0:26:72.87:83,0,73	0/1:31,0:29:99:411,0,154	0/0:18,0:18:19.72:0,20,395	1/1:22,0:21:46.69:1020,47,0	1/1:8,7:23:6.27:73,6,0	1/1:9,0:8:24.07:603,24,0
chr10	5746886	.	AAGGCG	A	3072.02	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=10.016;DP=690;FS=2.502;HRun=0;HaplotypeScore=129.0291;InbreedingCoeff=0.9631;MQ=85.72;MQ0=1;MQRankSum=-5.997;QD=42.08;ReadPosRankSum=0.788;VQSLOD=3.9636;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,44:46:96.33:2022,96,0	0/0:7,0:7:15.04:0,15,401	0/0:22,0:22:60.05:0,60,1637	0/0:26,0:26:66.14:0,66,1944	0/0:22,0:22:60.21:0,60,1828	0/0:15,0:15:45.11:0,45,1334	0/0:33,0:33:99:0,99,2987	0/0:31,0:31:84.21:0,84,2405	0/0:26,0:26:75.26:0,75,2325	0/0:27,0:27:75.26:0,75,2317	0/0:19,0:19:51.18:0,51,1518	0/0:30,0:30:90.31:0,90,2784	0/0:26,0:26:75.26:0,75,2276	0/0:28,0:28:81.28:0,81,2483	0/0:22,0:22:60.16:0,60,1804	0/0:30,0:30:90.24:0,90,2585	1/1:1,26:26:57.16:1172,57,0	0/0:24,0:24:66.17:0,66,1923	0/0:19,0:19:51.05:0,51,1389	0/0:19,0:19:48.16:0,48,1499	0/0:39,0:39:99:0,111,3285	0/0:22,0:22:57.15:0,57,1642	0/0:22,0:22:60.16:0,60,1718	0/0:23,0:23:66.19:0,66,1906	0/0:24,0:24:66.23:0,66,2012	0/0:28,0:28:84.29:0,84,2560	0/0:30,0:30:87.30:0,87,2635	0/0:3,0:3:9.03:0,9,282
chr10	5749449	.	C	CTT	4786.19	PASS	AB=0.581;AC=35;AF=0.625;AN=56;BaseQRankSum=2.806;DP=632;FS=13.308;HRun=12;HaplotypeScore=89.7847;InbreedingCoeff=0.6234;MQ=72.20;MQ0=1;MQRankSum=0.024;QD=11.29;ReadPosRankSum=-0.518;VQSLOD=1.8747;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:74.98:0,75,805	1/1:3,3:11:20.79:144,21,0	0/0:18,0:13:14.97:0,15,134	0/0:17,0:16:10.89:0,11,70	1/1:7,8:19:25.09:253,25,0	1/1:3,0:24:27.83:115,28,0	0/1:6,0:23:18.99:31,0,19	0/0:34,0:36:50.55:0,51,446	0/1:5,0:22:0.06:58,0,0	1/1:7,19:27:54.10:709,54,0	1/1:3,9:13:20.91:214,21,0	1/1:5,19:25:35.57:446,36,0	1/1:7,21:29:34.32:444,34,0	1/1:5,14:19:24.08:328,24,0	1/1:4,0:21:7.19:83,7,0	1/1:3,0:21:34.74:121,35,0	0/0:26,0:26:55.22:0,55,523	0/1:5,1:24:12.99:113,0,13	1/1:6,0:17:26.28:135,26,0	1/1:3,0:19:7.40:92,7,0	1/1:3,17:22:30.10:411,30,0	0/1:6,0:18:48.68:67,0,49	1/1:3,15:20:29.40:321,29,0	1/1:7,18:27:48.15:652,48,0	0/1:7,0:22:24.02:49,0,24	0/0:26,0:28:24.98:0,25,440	0/0:29,0:33:44.34:0,44,551	0/0:11,0:13:17.44:0,17,197
chr10	5750214	.	AGAGGCTAT	A	1588.78	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.707;DP=764;FS=2.901;HRun=0;HaplotypeScore=223.0710;InbreedingCoeff=0.9957;MQ=83.93;MQ0=0;MQRankSum=-7.716;QD=63.55;ReadPosRankSum=1.447;VQSLOD=3.5013;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,129,5582	0/0:11,0:11:33.10:0,33,1308	0/0:25,0:25:75.24:0,75,2914	0/0:29,0:30:78.65:0,79,3026	0/0:17,0:17:51.18:0,51,2210	0/0:28,0:28:81.25:0,81,3285	0/0:33,0:33:99:0,99,4284	0/0:27,0:27:78.26:0,78,3196	0/0:31,0:31:93.29:0,93,3795	0/0:41,0:41:99:0,114,4789	0/0:21,0:21:56.80:0,57,2408	0/0:41,0:41:99:0,123,5204	0/0:23,0:23:69.24:0,69,2823	0/0:22,0:22:60.21:0,60,2556	0/0:25,0:25:72.25:0,72,2971	0/0:22,0:22:63.22:0,63,2759	1/1:1,24:25:63.17:1684,63,0	0/0:29,0:29:84.27:0,84,3636	0/0:20,0:20:57.19:0,57,2186	0/0:30,0:30:90.30:0,90,3719	0/0:27,0:27:75.24:0,75,3128	0/0:24,0:24:69.24:0,69,3026	0/0:25,0:25:75.26:0,75,3303	0/0:39,0:39:99:0,114,4976	0/0:34,0:34:99:0,102,4390	0/0:24,0:24:69.24:0,69,3000	0/0:37,0:37:99:0,111,4806	0/0:7,0:7:21.07:0,21,889
chr10	5750822	.	G	GGT	4981.31	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=-7.012;DP=505;FS=11.684;HRun=0;HaplotypeScore=74.2281;InbreedingCoeff=0.9186;MQ=82.28;MQ0=0;MQRankSum=-0.749;QD=28.46;ReadPosRankSum=1.437;VQSLOD=5.9492;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:27:13.10:13,0,121	0/0:9,0:9:22.71:0,23,166	0/0:18,0:18:48.02:0,48,540	0/0:17,0:18:39.98:0,40,483	0/0:25,0:25:20.21:0,20,373	1/1:7,12:21:62.88:873,63,0	1/1:0,11:17:41.53:496,42,0	0/0:29,0:29:87.07:0,87,1032	1/1:0,11:11:24.08:446,24,0	0/0:14,0:14:32.34:0,32,246	0/0:18,0:18:32.78:0,33,191	0/0:17,0:17:21.98:0,22,149	0/0:18,0:18:35.36:0,35,179	0/0:19,0:19:31.12:0,31,208	1/1:0,14:16:44.91:736,45,0	1/1:0,2:17:26.98:327,27,0	0/0:29,0:29:84.25:0,84,1152	0/0:12,0:12:26.52:0,27,165	1/1:2,9:15:38.75:462,39,0	1/1:1,19:23:62.62:754,63,0	0/0:7,0:7:16.09:0,16,147	1/1:1,9:10:20.89:313,21,0	0/0:18,0:18:30.18:0,30,155	0/0:15,0:15:25.39:0,25,158	1/1:1,14:18:32.98:561,33,0	0/0:13,0:13:36.08:0,36,474	0/0:38,0:38:99:0,110,1402	0/0:13,0:13:37.88:0,38,446
chr10	5754204	.	TG	T	18307.61	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=3.412;DP=652;FS=0.000;HRun=4;HaplotypeScore=68.5540;InbreedingCoeff=0.9998;MQ=84.58;MQ0=0;MQRankSum=-7.812;QD=32.06;ReadPosRankSum=4.193;VQSLOD=5.2943;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,111,1529	1/1:1,13:14:36.11:432,36,0	0/0:24,0:24:69.22:0,69,921	0/0:19,0:19:54.18:0,54,743	1/1:2,26:28:66.20:792,66,0	1/1:3,23:26:66.20:792,66,0	1/1:0,15:15:45.14:540,45,0	1/1:3,30:33:81.21:939,81,0	1/1:0,18:18:45.14:540,45,0	1/1:1,30:31:90.26:1069,90,0	1/1:1,17:18:48.15:576,48,0	1/1:0,22:22:63.19:756,63,0	1/1:0,27:27:69.21:827,69,0	1/1:2,25:27:69.21:828,69,0	1/1:0,18:18:54.17:648,54,0	1/1:2,20:22:60.18:720,60,0	1/1:1,17:18:45.14:539,45,0	1/1:1,20:21:54.17:648,54,0	1/1:2,13:15:42.13:502,42,0	1/1:1,19:20:54.17:648,54,0	1/1:1,16:17:45.14:540,45,0	1/1:1,30:31:84.26:1007,84,0	1/1:1,28:29:75.23:900,75,0	1/1:1,14:15:42.13:504,42,0	1/1:1,31:32:90.28:1078,90,0	1/1:1,23:24:66.20:791,66,0	1/1:1,38:39:99:1296,108,0	1/1:0,11:11:33.10:396,33,0
chr10	5754208	.	GA	G	5084.75	PASS	AB=0.971;AC=47;AF=0.839;AN=56;BaseQRankSum=10.905;DP=663;FS=9.336;HRun=1;HaplotypeScore=115.7950;InbreedingCoeff=0.6018;MQ=86.42;MQ0=0;MQRankSum=-8.351;QD=8.83;ReadPosRankSum=8.655;VQSLOD=1.3350;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,114,1679	1/1:13,0:13:32.81:148,33,0	0/0:25,0:25:75.22:0,75,1083	0/0:23,0:23:63.17:0,63,922	1/1:28,0:28:38.53:268,39,0	1/1:23,0:23:59.77:261,60,0	1/1:16,0:16:17.38:130,17,0	0/1:35,1:36:33.46:180,0,33	1/1:19,0:19:18.46:144,18,0	1/1:31,0:31:38.29:193,38,0	1/1:17,1:18:43.95:199,44,0	1/1:22,0:22:56:240,56,0	1/1:27,0:27:61.72:260,62,0	1/1:25,0:25:61.33:254,61,0	1/1:19,0:19:25.81:173,26,0	1/1:21,0:21:30.44:181,30,0	0/1:19,0:19:0.54:130,0,1	1/1:20,0:20:47.43:190,47,0	0/1:15,1:16:14.04:125,0,14	1/1:20,0:20:9.07:151,9,0	1/1:17,0:17:18.29:142,18,0	1/1:31,0:31:52.79:310,53,0	1/1:30,0:30:24.76:284,25,0	1/1:15,0:15:17.21:144,17,0	1/1:34,1:35:12.02:307,12,0	1/1:25,0:25:4.22:140,4,0	1/1:39,0:39:78.17:395,78,0	1/1:11,0:11:29.84:134,30,0
chr10	5755509	.	AGTGTGTGTGTGT	A	4914.26	PASS	AB=0.873;AC=22;AF=0.458;AN=48;BaseQRankSum=5.073;DP=529;FS=4.416;HRun=0;HaplotypeScore=216.8802;InbreedingCoeff=0.4864;MQ=61.74;MQ0=15;MQRankSum=-7.536;QD=17.49;ReadPosRankSum=2.283;VQSLOD=3.3463;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:44,0:41:32.54:33,0,380	1/1:3,4:7:12.04:400,12,0	./.	./.	1/1:15,4:19:12.02:314,12,0	0/0:18,0:22:39.13:0,39,1320	0/0:19,0:26:51.18:0,51,1666	0/1:35,0:34:68.62:69,0,115	0/0:15,0:17:24.08:0,24,830	0/1:24,2:26:25.50:320,0,25	1/1:9,5:14:3.48:104,3,0	1/1:12,2:17:27.09:702,27,0	1/1:8,3:11:12.04:344,12,0	1/1:9,5:15:21.07:640,21,0	0/0:15,0:20:42.14:0,42,1535	0/0:13,0:18:24.08:0,24,773	0/0:22,0:24:23.51:0,24,659	0/1:12,8:20:7.62:775,0,8	0/0:10,0:10:15.05:0,15,577	0/0:15,0:18:27.08:0,27,862	./.	0/0:14,0:15:21.04:0,21,542	1/1:10,4:14:12.04:376,12,0	1/1:13,5:18:12.04:358,12,0	0/0:17,0:25:39.13:0,39,1280	0/1:13,1:17:1.84:220,0,2	0/1:17,1:22:81.70:260,0,82	./.
chr10	5755546	.	GTGTGTGTGCA	G	1568.43	PASS	AB=0.967;AC=13;AF=0.232;AN=56;BaseQRankSum=9.487;DP=524;FS=3.093;HRun=0;HaplotypeScore=201.7126;InbreedingCoeff=-0.3202;MQ=52.92;MQ0=20;MQRankSum=-9.837;QD=7.10;ReadPosRankSum=5.364;VQSLOD=2.5406;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:10,30:38:44.41:363,0,44	0/1:8,0:8:99:106,0,158	0/0:22,0:8:21.69:0,22,333	0/0:23,0:14:6.45:0,6,372	0/1:14,0:14:61.47:61,0,163	0/0:24,0:24:33.18:0,33,1092	0/0:35,0:35:81.09:0,81,1579	0/0:21,0:20:7.14:0,7,513	0/0:16,0:16:45.14:0,45,906	0/1:15,0:12:60.85:61,0,369	0/1:14,0:14:25.73:26,0,132	0/1:17,0:17:99:148,0,277	0/1:14,0:14:70.11:70,0,286	0/1:15,0:15:99:190,0,236	0/0:23,0:22:57.19:0,57,1494	0/0:17,0:17:42.12:0,42,962	0/0:28,0:26:63.21:0,63,1218	0/1:16,0:16:99:173,0,136	0/0:10,0:10:30.07:0,30,594	0/0:17,0:16:39.13:0,39,993	0/0:15,0:14:17.92:0,18,309	0/0:18,0:18:51.17:0,51,1114	0/1:14,0:13:86.90:87,0,201	0/1:18,0:18:85.78:86,0,277	0/0:30,0:30:63.13:0,63,1492	0/1:21,0:21:99:139,0,705	0/1:15,0:14:99:211,0,282	0/0:4,0:3:5.59:0,6,38
chr10	5755573	.	T	TG	12507.13	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-5.330;DP=573;FS=30.948;HRun=7;HaplotypeScore=110.6486;InbreedingCoeff=0.9916;MQ=79.20;MQ0=1;MQRankSum=-7.807;QD=26.17;ReadPosRankSum=6.556;VQSLOD=2.9099;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:21.02:0,21,203	1/1:5,5:10:18.04:205,18,0	0/0:30,0:25:60.44:0,60,553	0/0:32,0:31:53.65:0,54,515	1/1:2,14:16:35.91:434,36,0	1/1:2,14:16:39.12:471,39,0	1/1:3,25:28:72.22:870,72,0	1/1:3,20:23:60.16:700,60,0	1/1:1,17:18:42.13:507,42,0	1/1:4,13:17:39.12:471,39,0	1/1:4,11:15:27.08:318,27,0	1/1:6,13:19:36.11:431,36,0	1/1:3,20:23:39.70:701,40,0	1/1:5,14:19:36.11:434,36,0	1/1:4,19:23:57.17:688,57,0	1/1:4,15:19:22.18:548,22,0	1/1:4,1:29:52.29:291,52,0	1/1:4,11:15:30.09:362,30,0	1/1:0,12:12:36.07:418,36,0	1/1:1,10:11:27.08:326,27,0	1/1:1,20:21:51.15:613,51,0	1/1:3,17:20:48.15:580,48,0	1/1:5,14:19:32.80:397,33,0	1/1:6,25:31:41.18:669,41,0	1/1:8,20:28:56.53:740,57,0	1/1:5,20:25:60.18:725,60,0	1/1:4,10:13:30.09:362,30,0	1/1:1,6:7:21.06:246,21,0
chr10	5758731	.	CTG	C	1939.40	PASS	AB=0.925;AC=13;AF=0.232;AN=56;BaseQRankSum=6.050;DP=867;FS=3.454;HRun=0;HaplotypeScore=213.6016;InbreedingCoeff=0.0336;MQ=62.62;MQ0=7;MQRankSum=-5.555;QD=6.14;ReadPosRankSum=0.622;VQSLOD=2.8132;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:37,0:36:47.72:48,0,48	0/0:10,0:10:15.04:0,15,168	0/0:44,0:24:1.33:0,1,35	0/0:37,1:19:7.11:0,7,41	0/1:21,0:21:1.08:1,0,272	0/1:16,3:21:17.03:212,0,17	0/1:30,5:37:5.86:180,0,6	0/0:32,0:31:28:0,28,259	0/1:30,6:36:27.63:220,0,28	0/0:38,0:38:43.95:0,44,779	0/0:15,0:15:33.09:0,33,370	0/0:30,0:30:60.12:0,60,650	0/0:37,0:37:69.14:0,69,782	0/0:39,0:39:56.24:0,56,704	0/1:33,3:36:11.08:462,0,11	1/1:32,5:35:0.04:417,0,0	0/0:27,0:28:28.33:0,28,195	0/0:20,1:21:1.86:0,2,311	0/1:15,0:15:30.13:40,0,30	1/1:27,0:27:22.87:244,23,0	0/0:62,1:63:95.08:0,95,1325	0/1:18,2:20:15.42:90,0,15	0/0:23,0:23:48.10:0,48,513	0/0:58,3:61:26.81:0,27,1272	0/1:24,2:25:71.45:175,0,71	0/0:38,0:39:73.62:0,74,590	0/0:27,0:27:41.86:0,42,327	0/0:5,0:5:5.98:0,6,46
chr10	5758753	.	G	GTA	5650.15	PASS	AB=0.873;AC=23;AF=0.411;AN=56;BaseQRankSum=-3.966;DP=891;FS=18.106;HRun=0;HaplotypeScore=219.2432;InbreedingCoeff=-0.1488;MQ=48.30;MQ0=16;MQRankSum=-2.343;QD=10.14;ReadPosRankSum=-3.446;VQSLOD=2.8158;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:32:19.13:0,19,165	0/0:6,0:6:16.35:0,16,69	0/0:57,0:12:32.84:0,33,301	0/0:43,0:8:20.21:0,20,185	0/0:17,0:17:10.79:0,11,112	0/1:23,0:24:99:157,0,129	0/1:34,0:35:45.17:178,0,45	1/1:5,31:35:65.28:1050,65,0	0/1:32,0:35:99:219,0,123	0/1:38,0:37:23.86:24,0,286	0/0:13,0:13:32.51:0,33,138	0/1:30,0:30:99:147,0,132	0/1:36,0:36:99:196,0,201	0/0:33,0:33:4.87:0,5,230	0/1:27,1:40:73.45:294,0,73	0/1:33,0:40:69.40:188,0,69	0/1:30,0:31:39.96:207,0,40	0/1:18,1:19:33.52:34,0,128	0/1:13,0:27:99:269,0,134	0/1:5,0:29:55.17:55,0,68	0/0:73,0:73:14.72:0,15,397	0/1:16,0:20:42.82:134,0,43	0/1:23,0:23:38.29:38,0,117	0/0:58,0:58:17.24:0,17,421	0/1:18,0:23:37.81:207,0,38	1/1:8,29:37:60.33:1396,60,0	1/1:0,20:22:42.14:742,42,0	1/1:1,4:5:6.02:115,6,0
chr10	5758803	.	ATG	A	34.62	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-0.258;DP=672;FS=0.000;HRun=0;HaplotypeScore=246.7773;InbreedingCoeff=0.5699;MQ=51.97;MQ0=3;MQRankSum=1.179;QD=2.66;ReadPosRankSum=0.241;VQSLOD=2.3390;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:5,8:13:9.03:118,9,0	0/0:7,0:7:11.75:0,12,200	0/0:13,0:5:8.63:0,9,53	0/0:20,0:3:3.01:0,3,51	0/0:13,0:13:11.84:0,12,196	0/0:21,0:21:27.09:0,27,463	0/0:31,0:31:68.80:0,69,1165	0/0:17,0:17:43.02:0,43,677	0/0:34,0:34:56.83:0,57,919	0/0:21,0:21:57.04:0,57,851	0/0:13,0:13:5.76:0,6,90	0/0:33,0:33:47.65:0,48,805	0/0:45,0:45:99:0,102,1670	0/0:32,0:32:23.05:0,23,350	0/0:36,0:36:50.58:0,51,850	0/0:42,0:41:35.18:0,35,614	0/0:23,0:23:51.15:0,51,830	0/0:12,0:12:11.99:0,12,175	0/0:17,0:17:36.12:0,36,565	0/0:21,0:21:32.67:0,33,500	0/0:52,0:52:27.24:0,27,684	0/0:21,0:21:23.92:0,24,384	0/0:21,0:21:24.08:0,24,396	0/0:43,0:43:60.61:0,61,997	0/0:24,0:24:14.78:0,15,252	0/0:24,0:24:66.11:0,66,1052	0/0:17,0:17:21.04:0,21,290	0/0:5,0:5:5.91:0,6,67
chr10	5758834	.	TGTGTGTGTGG	T	3212.85	PASS	AB=0.980;AC=34;AF=0.607;AN=56;BaseQRankSum=-3.622;DP=802;FS=2.270;HRun=0;HaplotypeScore=296.1294;InbreedingCoeff=-0.1834;MQ=44.74;MQ0=22;MQRankSum=0.252;QD=5.14;ReadPosRankSum=-0.096;VQSLOD=2.3154;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:54.66:0,55,1888	0/1:11,0:11:26.86:27,0,40	0/1:39,0:5:7.23:7,0,37	0/0:53,0:3:3.01:0,3,48	1/1:21,1:20:2.43:7,2,0	0/1:23,0:23:23.69:58,0,24	0/1:35,0:35:90.49:90,0,97	0/1:24,0:22:0.30:104,0,0	0/1:34,0:34:66.50:66,0,188	0/1:29,0:29:99:156,0,252	1/1:18,0:18:0.47:1,0,0	1/1:33,1:34:2.16:121,2,0	0/1:43,0:43:25.33:516,0,25	1/1:45,1:43:19.95:199,20,0	0/1:32,0:32:24.10:24,0,184	0/1:33,0:32:8.72:9,0,9	0/1:25,7:31:52.98:815,0,53	1/1:21,0:21:1.90:33,2,0	0/1:18,0:13:50:102,0,50	0/1:18,1:18:2.20:2,0,141	0/0:63,0:62:0.44:0,0,1	1/1:26,0:26:0.94:2,1,0	1/1:14,0:14:0.17:1,0,0	0/1:39,2:40:99:100,0,142	0/0:24,1:25:0.47:0,0,1	1/1:20,0:20:39.37:670,39,0	1/1:8,0:8:6.02:148,6,0	1/1:3,0:3:5.97:94,6,0
chr10	5758836	.	TGTGTGTGG	T	6049.74	PASS	AB=0.951;AC=42;AF=0.750;AN=56;BaseQRankSum=-1.379;DP=808;FS=0.000;HRun=0;HaplotypeScore=275.8066;InbreedingCoeff=0.2495;MQ=44.85;MQ0=25;MQRankSum=-1.349;QD=9.59;ReadPosRankSum=2.859;VQSLOD=3.3631;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:54.17:0,54,1489	1/1:10,1:11:4.30:110,4,0	0/1:39,0:5:7.51:8,0,16	0/0:51,0:2:3.01:0,3,45	1/1:23,0:21:1.79:4,2,0	1/1:23,1:24:35.25:309,35,0	1/1:35,0:35:32.89:238,33,0	1/1:25,0:22:10.43:162,10,0	1/1:34,0:34:0.82:321,1,0	0/1:27,1:28:25.38:400,0,25	1/1:19,0:19:0.47:1,0,0	1/1:8,27:35:9.13:352,9,0	1/1:31,13:44:78.02:1126,78,0	1/1:7,39:43:27.31:564,27,0	1/1:28,3:31:29.81:310,30,0	1/1:32,0:31:22.48:158,22,0	0/1:34,0:33:15.71:548,0,16	1/1:21,0:21:10.99:72,11,0	1/1:17,0:12:13.47:199,13,0	0/1:20,0:19:14.27:101,0,14	0/0:64,0:63:0.47:0,0,1	0/1:25,1:26:0:1,0,0	1/1:3,11:14:0.17:0,0,0	0/1:30,12:41:13.68:278,0,14	0/0:26,0:26:0.47:0,0,1	1/1:20,0:20:37.61:575,38,0	1/1:8,0:8:6.02:131,6,0	1/1:3,0:3:5.97:81,6,0
chr10	5758838	.	TGTGTGG	T	8274.83	PASS	AB=0.689;AC=47;AF=0.839;AN=56;BaseQRankSum=-1.099;DP=809;FS=0.781;HRun=0;HaplotypeScore=256.3367;InbreedingCoeff=0.5939;MQ=45.75;MQ0=25;MQRankSum=-0.306;QD=11.89;ReadPosRankSum=1.952;VQSLOD=3.2797;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:54.28:0,54,1045	1/1:2,10:12:15.74:236,16,0	0/1:38,0:3:7.71:8,0,12	0/0:51,0:3:4.76:0,5,23	1/1:3,20:21:1.41:3,1,0	1/1:13,11:24:36:549,36,0	1/1:25,8:33:50.52:564,51,0	1/1:24,0:21:27.32:270,27,0	1/1:24,11:35:54.11:695,54,0	1/1:3,24:27:75.03:964,75,0	1/1:0,19:19:0.47:1,0,0	1/1:32,0:32:21.35:225,21,0	1/1:45,0:45:82.28:764,82,0	1/1:45,1:43:27.54:328,28,0	1/1:14,18:32:49.92:827,50,0	1/1:1,29:29:22.88:433,23,0	1/1:33,0:32:23.48:477,23,0	1/1:5,17:22:8.51:157,9,0	1/1:6,11:12:32.95:400,33,0	1/1:15,5:19:29.69:284,30,0	0/1:9,56:64:0:0,0,0	0/1:3,23:26:0.25:0,0,0	1/1:11,2:13:0.17:0,0,0	1/1:42,1:42:29.19:255,29,0	0/0:1,25:26:0.47:0,0,1	1/1:23,0:23:48.67:644,49,0	1/1:11,0:11:6.02:115,6,0	1/1:3,0:3:5.97:76,6,0
chr10	5758840	.	TGTGG	T	6535.80	PASS	AB=1.000;AC=46;AF=0.821;AN=56;BaseQRankSum=-0.382;DP=820;FS=0.882;HRun=0;HaplotypeScore=255.5883;InbreedingCoeff=0.5323;MQ=46.50;MQ0=24;MQRankSum=-1.304;QD=8.63;ReadPosRankSum=-0.235;VQSLOD=3.5442;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:25.87:0,26,561	1/1:11,1:12:14.78:135,15,0	0/1:39,0:3:8.17:8,0,9	0/1:52,0:4:0.23:16,0,0	1/1:23,0:21:0.89:2,1,0	1/1:23,0:23:35.95:336,36,0	1/1:33,0:33:48.93:413,49,0	1/1:25,0:22:47.35:346,47,0	1/1:34,3:37:57.47:546,57,0	1/1:26,0:26:72.48:685,72,0	0/1:19,0:19:0:1,0,0	1/1:31,0:31:21.30:178,21,0	1/1:47,0:47:79.36:660,79,0	1/1:46,0:43:27.28:239,27,0	1/1:32,0:32:47.69:442,48,0	1/1:30,0:29:22.52:234,23,0	1/1:34,0:33:52.12:457,52,0	1/1:21,0:21:8.98:91,9,0	1/1:17,0:12:32.94:299,33,0	1/1:20,0:19:32.85:275,33,0	0/1:65,0:64:0:0,0,0	0/1:26,0:26:0.04:0,0,0	0/1:13,0:13:0.30:0,0,0	1/1:47,0:46:40.38:308,40,0	0/0:26,0:26:0.47:0,0,1	1/1:24,0:24:65.55:685,66,0	1/1:12,0:12:9.02:114,9,0	1/1:3,0:3:5.97:64,6,0
chr10	5758842	.	TGG	T	5966.17	PASS	AB=0.988;AC=48;AF=0.857;AN=56;BaseQRankSum=-1.507;DP=810;FS=2.251;HRun=3;HaplotypeScore=245.7286;InbreedingCoeff=0.3626;MQ=46.57;MQ0=24;MQRankSum=-2.198;QD=7.37;ReadPosRankSum=-1.144;VQSLOD=0.6649;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:35,2:37:73.87:74,0,136	1/1:12,0:12:14.59:101,15,0	0/1:38,0:3:1.98:14,0,2	0/1:46,0:3:0.15:16,0,0	1/1:23,0:21:0.93:1,1,0	1/1:21,0:21:35.68:256,36,0	1/1:34,0:34:50.89:420,51,0	1/1:24,0:21:48.81:353,49,0	1/1:34,3:37:56.64:451,57,0	1/1:26,0:26:69.63:568,70,0	0/1:19,0:19:0:0,0,0	1/1:30,0:30:21.43:137,21,0	1/1:47,1:48:87.32:632,87,0	1/1:45,0:42:26.86:174,27,0	1/1:32,0:32:50.70:359,51,0	1/1:29,1:29:22.69:149,23,0	1/1:33,0:32:64.56:455,65,0	1/1:20,0:20:9.40:64,9,0	1/1:17,0:12:32.85:257,33,0	1/1:23,0:22:41.85:338,42,0	0/1:63,0:62:0:0,0,0	0/1:25,0:25:0.23:0,0,0	0/1:13,0:13:0:0,0,0	1/1:47,0:46:44.76:350,45,0	0/1:26,0:26:0:0,0,0	1/1:20,6:26:74.09:658,74,0	1/1:0,10:10:9.01:86,9,0	1/1:1,2:3:5.96:50,6,0
chr10	5758860	.	TGTGTATGTGTGA	T	2481.33	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=1.105;DP=819;FS=1.694;HRun=0;HaplotypeScore=341.0962;InbreedingCoeff=0.5695;MQ=51.54;MQ0=19;MQRankSum=-4.456;QD=13.34;ReadPosRankSum=-2.726;VQSLOD=1.4803;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:76.12:0,76,3375	0/0:12,0:12:5.76:0,6,136	0/0:28,0:8:23.75:0,24,344	0/0:32,0:5:11.83:0,12,193	1/1:22,0:20:2.70:7,3,0	0/0:23,0:23:23.62:0,24,328	0/0:33,0:33:36.61:0,37,508	1/1:20,0:18:16.14:308,16,0	0/0:37,0:37:47.49:0,47,711	0/0:29,0:29:59.34:0,59,948	0/0:19,0:19:5.72:0,6,50	0/0:37,0:37:8.52:0,9,218	0/1:42,0:42:43.29:43,0,513	0/0:46,0:44:22:0,22,259	0/0:39,0:39:53.79:0,54,726	0/0:33,0:32:24.13:0,24,284	0/1:35,0:34:99:320,0,230	0/1:23,0:23:17.56:18,0,151	0/0:14,0:9:17.89:0,18,258	0/0:22,0:21:24.68:0,25,434	0/0:62,0:61:17.61:0,18,138	0/0:22,0:22:4.79:0,5,46	0/0:19,0:19:8.03:0,8,71	0/0:48,0:47:32.63:0,33,453	0/0:32,0:32:24.85:0,25,196	1/1:20,5:25:70.70:1407,71,0	1/1:10,2:12:17.94:314,18,0	1/1:5,2:7:17.98:235,18,0
chr10	5759138	.	T	TCTG	4951.61	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-4.236;DP=667;FS=0.000;HRun=0;HaplotypeScore=180.9648;InbreedingCoeff=0.9698;MQ=82.51;MQ0=0;MQRankSum=-8.558;QD=60.39;ReadPosRankSum=-2.037;VQSLOD=4.5746;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,138,2289	0/0:10,0:10:27.09:0,27,450	0/0:20,0:20:51.17:0,51,787	0/0:21,0:21:52.96:0,53,764	0/0:23,0:23:63.15:0,63,990	0/0:15,0:15:45.14:0,45,707	0/0:22,0:22:66.23:0,66,1097	1/1:7,28:35:93.12:1949,93,0	0/0:22,0:22:63.20:0,63,1010	0/0:23,0:23:69.23:0,69,1115	0/0:12,0:12:33.11:0,33,544	0/0:33,0:33:90.29:0,90,1445	0/0:37,0:37:99:0,111,1803	0/0:34,0:34:99:0,99,1579	0/0:36,0:36:99:0,105,1745	0/0:37,0:37:99:0,105,1734	0/0:25,0:25:72.25:0,72,1199	0/0:24,0:24:66.23:0,66,1091	0/0:16,0:16:48.16:0,48,787	0/0:21,0:21:60.14:0,60,941	0/0:29,0:29:84.25:0,84,1340	0/0:28,0:28:72.20:0,72,1161	0/0:12,0:12:33.11:0,33,547	0/0:21,0:20:60.16:0,60,965	0/0:18,0:18:51.12:0,51,788	1/1:4,24:30:87.30:1916,87,0	1/1:1,14:15:42.14:950,42,0	1/1:0,2:2:6.02:136,6,0
chr10	5759860	.	TGCGCGC	T	2385.08	PASS	AB=1.000;AC=37;AF=0.740;AN=50;BaseQRankSum=-1.202;DP=285;FS=6.121;HRun=0;HaplotypeScore=85.8659;InbreedingCoeff=0.2051;MQ=70.23;MQ0=9;MQRankSum=-3.551;QD=10.60;ReadPosRankSum=-0.784;VQSLOD=1.2670;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:47.90:0,48,387	./.	0/0:5,0:2:0.47:0,0,1	0/1:13,0:13:34.77:93,0,35	0/1:9,0:9:0:1,0,0	1/1:1,6:7:3.01:55,3,0	1/1:15,0:15:3.48:55,3,0	0/1:15,0:15:1.27:1,0,158	1/1:5,0:4:5.98:75,6,0	1/1:1,4:5:12.04:233,12,0	0/1:6,0:5:0:0,0,0	./.	1/1:14,0:14:9.03:161,9,0	./.	1/1:7,0:7:3.01:51,3,0	1/1:2,5:7:3.01:56,3,0	1/1:12,0:11:6.02:101,6,0	1/1:14,3:18:51.13:1007,51,0	1/1:2,5:6:15.05:313,15,0	1/1:5,1:7:6.02:135,6,0	1/1:12,0:11:2.92:17,3,0	0/1:9,0:8:0:1,0,0	1/1:4,2:6:3.47:26,3,0	1/1:11,1:11:2.61:51,3,0	1/1:8,0:8:2.97:20,3,0	0/1:13,0:13:47.62:48,0,79	0/1:18,0:18:14.36:14,0,190	0/0:4,0:4:5.91:0,6,38
chr10	5759865	.	GCGCGCGCACACACACA	G	2388.14	PASS	AB=0.777;AC=34;AF=0.708;AN=48;BaseQRankSum=-1.316;DP=278;FS=3.502;HRun=0;HaplotypeScore=105.0756;InbreedingCoeff=0.2789;MQ=60.99;MQ0=12;MQRankSum=-2.488;QD=12.37;ReadPosRankSum=1.097;VQSLOD=1.4672;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:26:12.90:0,13,362	./.	./.	0/1:7,0:7:34.77:93,0,35	0/1:1,8:10:0.42:0,0,0	1/1:6,0:6:3.01:55,3,0	1/1:0,1:13:3.04:45,3,0	0/0:19,0:18:7.80:0,8,216	1/1:1,0:4:5.98:65,6,0	1/1:4,0:4:12.04:233,12,0	0/1:1,3:4:0.03:0,0,0	./.	1/1:1,3:13:9.03:234,9,0	./.	1/1:1,0:7:2.84:14,3,0	1/1:6,0:6:3.01:56,3,0	1/1:1,0:12:6.02:171,6,0	1/1:19,0:20:51.03:1007,51,0	0/1:7,0:6:3.15:295,0,3	1/1:3,0:5:6.02:110,6,0	1/1:1,12:12:2.92:17,3,0	0/1:3,0:10:0.02:0,0,0	1/1:7,0:7:3.47:26,3,0	1/1:4,9:12:2.64:52,3,0	1/1:0,0:9:2.70:20,3,0	0/0:12,0:12:2.86:0,3,153	0/1:18,0:18:29.61:30,0,376	0/0:5,0:5:7.95:0,8,45
chr10	5759867	.	GCGCGCACACACACACACA	G	1443.95	PASS	AB=0.967;AC=26;AF=0.520;AN=50;BaseQRankSum=0.302;DP=275;FS=28.139;HRun=0;HaplotypeScore=111.6373;InbreedingCoeff=0.0847;MQ=60.71;MQ0=14;MQRankSum=-0.542;QD=6.94;ReadPosRankSum=0.036;VQSLOD=0.2562;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:25:27.65:28,0,72	./.	./.	0/1:7,0:7:3.37:58,0,3	0/1:10,0:10:0.37:0,0,1	1/1:6,0:6:3.01:37,3,0	0/1:13,0:13:0.34:0,0,1	0/1:19,0:17:62.23:62,0,108	0/1:5,0:4:0.04:0,0,0	1/1:4,0:4:11.99:143,12,0	0/0:6,0:4:0:0,0,0	./.	1/1:12,0:12:9.03:136,9,0	0/0:9,0:8:0.47:0,0,1	0/0:6,0:7:3:0,3,29	1/1:6,0:6:2.74:35,3,0	1/1:14,0:13:1.56:155,2,0	1/1:19,0:19:48.13:639,48,0	0/1:8,0:7:60.04:190,0,60	0/1:5,0:5:18.49:36,0,18	0/1:13,0:12:0:0,0,0	0/0:10,0:9:0:0,0,0	0/1:2,4:6:0:0,0,0	1/1:14,0:12:3.42:33,3,0	0/1:9,0:9:0.04:0,0,0	0/1:12,0:12:5.10:5,0,191	0/0:18,0:18:1.04:0,1,411	0/0:5,0:5:2.98:0,3,22
chr10	5759953	.	TATAC	T	2553.34	PASS	AB=1.000;AC=23;AF=0.460;AN=50;BaseQRankSum=-5.448;DP=274;FS=7.244;HRun=0;HaplotypeScore=76.8431;InbreedingCoeff=-0.0165;MQ=65.75;MQ0=6;MQRankSum=-2.203;QD=12.46;ReadPosRankSum=-3.477;VQSLOD=0.7872;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,26:28:21.07:377,21,0	0/0:2,0:2:2.99:0,3,24	0/0:23,0:4:0.47:0,0,1	0/0:23,0:12:5.30:0,5,19	0/0:4,0:4:5.03:0,5,30	0/1:14,0:14:7.01:7,0,118	1/1:2,0:2:3:25,3,0	1/1:4,25:29:77.31:825,77,0	0/0:4,0:4:5.98:0,6,47	0/1:4,0:4:32.20:33,0,32	./.	0/1:4,0:4:18.16:19,0,18	./.	0/1:4,0:4:18.86:19,0,30	0/1:6,0:6:15.97:16,0,36	0/0:1,0:1:3:0,3,29	0/1:18,0:18:23.73:24,0,42	0/1:20,0:20:6.64:7,0,172	0/1:13,0:13:79.63:80,0,96	0/1:6,0:6:34.83:35,0,74	0/1:6,0:6:34.61:35,0,35	./.	0/1:3,0:3:0.95:20,0,1	0/0:3,0:3:5.99:0,6,49	0/0:4,0:4:5.65:0,6,48	1/1:1,22:23:22.01:809,22,0	1/1:5,13:18:15:245,15,0	1/1:2,5:7:8.98:132,9,0
chr10	5759957	.	CATATAT	C	999.12	PASS	AB=0.956;AC=16;AF=0.320;AN=50;BaseQRankSum=-0.009;DP=276;FS=3.556;HRun=0;HaplotypeScore=87.3572;InbreedingCoeff=-0.0099;MQ=68.45;MQ0=6;MQRankSum=-3.245;QD=5.81;ReadPosRankSum=-1.267;VQSLOD=1.7668;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:26:21.05:227,21,0	0/0:2,0:2:3.01:0,3,47	0/0:21,0:4:0.47:0,0,1	0/0:23,0:12:1.41:0,1,2	0/0:6,0:6:9.12:0,9,65	0/0:16,0:16:15.05:0,15,266	1/1:4,0:4:9.02:122,9,0	1/1:27,0:28:8.05:220,8,0	0/0:3,0:3:6.02:0,6,91	0/1:2,2:4:42.30:42,0,69	./.	0/0:3,0:3:3.01:0,3,48	./.	0/1:4,0:4:42.82:43,0,50	0/0:6,0:6:6.02:0,6,89	0/0:1,0:1:2.92:0,3,17	0/1:18,0:18:53.64:54,0,122	0/1:21,0:21:3.08:3,0,362	0/0:12,0:12:15.18:0,15,279	0/1:5,0:5:34.02:34,0,167	0/1:7,0:7:59.80:60,0,79	./.	0/0:3,0:3:2.04:0,2,6	0/0:3,0:3:6.02:0,6,80	0/1:8,0:8:70.79:178,0,71	0/1:23,0:23:54.49:104,0,54	0/1:16,0:16:3.06:38,0,3	0/1:7,0:8:6.45:18,0,6
chr10	5759963	.	T	TAC	2252.06	PASS	AB=0.860;AC=41;AF=0.759;AN=54;BaseQRankSum=-7.064;DP=289;FS=0.000;HRun=0;HaplotypeScore=69.4703;InbreedingCoeff=0.3741;MQ=66.68;MQ0=5;MQRankSum=5.106;QD=10.83;ReadPosRankSum=-0.128;VQSLOD=2.9843;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:28:25.42:138,25,0	1/1:0,2:3:3.01:57,3,0	0/1:13,0:5:0:0,0,0	0/1:16,0:8:0:0,0,1	1/1:1,1:10:3.01:34,3,0	0/1:3,11:16:7.89:215,0,8	1/1:5,0:5:12.01:147,12,0	0/0:28,0:28:62.27:0,62,327	1/1:0,4:4:6.02:115,6,0	0/1:4,0:4:29.30:39,0,29	./.	1/1:2,0:6:2.97:33,3,0	1/1:1,0:1:2.99:24,3,0	1/1:5,0:5:5.65:48,6,0	1/1:0,5:5:6.02:115,6,0	1/1:3,0:3:7.54:52,8,0	1/1:18,0:19:0.51:76,1,0	1/1:3,2:25:9.08:303,9,0	1/1:4,10:14:11.22:252,11,0	0/1:4,2:6:8.41:138,0,8	1/1:6,2:8:18:213,18,0	1/1:1,0:1:2.99:24,3,0	1/1:2,0:3:4.55:29,5,0	1/1:1,0:4:6.02:69,6,0	1/1:8,1:9:24.02:285,24,0	0/0:26,0:26:44:0,44,328	0/0:16,0:16:17.60:0,18,109	0/0:7,0:7:11.75:0,12,73
chr10	5760559	.	G	GACACACACACACACACAC	19553.13	PASS	AB=1.000;AC=48;AF=0.857;AN=56;BaseQRankSum=-2.215;DP=782;FS=3.044;HRun=0;HaplotypeScore=349.9640;InbreedingCoeff=0.4673;MQ=61.54;MQ0=6;MQRankSum=-4.606;QD=29.85;ReadPosRankSum=0.538;VQSLOD=2.5633;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:41,0:48:62.34:1857,62,0	1/1:9,0:12:9.03:205,9,0	0/0:46,0:30:8.62:0,9,700	0/0:53,0:35:17.96:0,18,921	1/1:10,0:20:5.75:114,6,0	1/1:8,2:21:9.03:767,9,0	1/1:19,0:38:11.93:768,12,0	0/1:23,0:22:24.74:526,0,25	1/1:27,1:28:39.10:2300,39,0	1/1:10,0:23:46.61:1059,47,0	1/1:9,0:17:5.94:152,6,0	1/1:9,0:24:36.12:899,36,0	1/1:15,0:32:51.05:1088,51,0	1/1:12,0:38:51.10:1252,51,0	1/1:24,7:51:21.54:1385,22,0	1/1:12,4:26:16.32:1428,16,0	0/0:4,0:28:9.76:0,10,111	1/1:8,0:16:27.02:667,27,0	1/1:25,0:25:56.95:2313,57,0	1/1:11,2:20:6.02:512,6,0	1/1:8,0:26:12.04:272,12,0	1/1:13,2:24:5.60:371,6,0	1/1:9,0:21:5.59:150,6,0	1/1:12,0:26:18.05:414,18,0	1/1:16,0:22:3.01:196,3,0	1/1:29,0:29:39.38:602,39,0	0/1:32,0:32:48.87:210,0,49	1/1:6,0:6:3.01:43,3,0
chr10	5760568	.	A	ACACACG	11220.68	PASS	AB=1.000;AC=35;AF=0.625;AN=56;BaseQRankSum=7.398;DP=763;FS=9.659;HRun=0;HaplotypeScore=267.0958;InbreedingCoeff=-0.4574;MQ=66.70;MQ0=6;MQRankSum=-10.169;QD=15.63;ReadPosRankSum=9.815;VQSLOD=2.0758;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:46,0:46:99:423,0,219	0/1:11,0:11:9.95:104,0,10	0/0:45,0:29:71.50:0,71,1000	0/1:51,0:34:5.52:6,0,947	0/1:19,0:19:11.86:122,0,12	0/1:21,0:21:56.84:133,0,57	0/1:37,0:37:74.16:126,0,74	1/1:10,1:27:70.96:867,71,0	0/1:31,0:30:99:242,0,124	0/1:25,0:24:93.79:411,0,94	0/1:19,0:19:34.95:111,0,35	0/1:27,0:26:71.65:683,0,72	1/1:29,0:29:2.53:816,3,0	1/1:35,0:35:29.62:955,30,0	0/1:46,0:44:22.96:230,0,23	0/1:24,0:24:26.17:330,0,26	1/1:25,0:25:29.34:718,29,0	0/1:20,0:20:99:224,0,106	0/1:25,0:25:99:410,0,127	0/1:17,0:16:12.99:127,0,13	0/1:26,0:26:53.82:223,0,54	0/1:25,0:24:15.97:54,0,16	1/1:16,0:16:6.02:128,6,0	0/1:27,0:27:17.27:250,0,17	0/1:22,0:22:33.67:34,0,62	1/1:6,22:30:71.80:1822,72,0	1/1:2,23:31:57.23:1615,57,0	1/1:2,0:5:3.01:60,3,0
chr10	5760865	.	TACACACACAC	T	981.70	PASS	AB=0.790;AC=12;AF=0.250;AN=48;BaseQRankSum=2.368;DP=612;FS=26.758;HRun=0;HaplotypeScore=163.6958;InbreedingCoeff=0.2265;MQ=56.12;MQ0=18;MQRankSum=-3.604;QD=4.77;ReadPosRankSum=-1.194;VQSLOD=1.1744;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:45.05:0,45,1060	0/0:7,0:7:3.01:0,3,43	./.	./.	0/0:11,0:11:8.99:0,9,123	1/1:11,12:23:2.97:20,3,0	0/1:23,2:25:80.73:146,0,81	0/0:20,0:17:8.99:0,9,112	1/1:8,13:22:8.51:266,9,0	0/1:17,0:19:4.18:4,0,290	0/0:9,0:9:2.53:0,3,24	0/0:16,0:16:20.85:0,21,198	0/0:17,0:27:23.67:0,24,168	./.	1/1:10,10:20:8.50:245,9,0	0/1:8,12:20:4.41:299,0,4	0/0:37,0:41:75.22:0,75,2208	0/0:16,0:16:16.87:0,17,135	0/0:13,0:15:8.86:0,9,100	0/1:7,0:4:9:17,0,9	0/0:44,0:59:38.96:0,39,579	./.	0/0:17,0:16:14.99:0,15,185	0/1:29,0:47:52.04:52,0,60	0/1:9,9:19:14.97:73,0,15	0/0:14,0:17:19.59:0,20,341	0/0:9,0:11:11.36:0,11,109	0/0:7,0:10:3.63:0,4,14
chr10	5761288	.	G	GTT	9028.26	PASS	AB=0.973;AC=45;AF=0.804;AN=56;BaseQRankSum=3.165;DP=691;FS=18.049;HRun=1;HaplotypeScore=235.7768;InbreedingCoeff=0.2281;MQ=39.94;MQ0=21;MQRankSum=-0.097;QD=13.95;ReadPosRankSum=5.072;VQSLOD=-0.1167;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:23:29.08:342,29,0	1/1:7,1:8:17.55:162,18,0	0/0:22,0:16:44.99:0,45,605	0/0:21,0:10:18.94:0,19,235	1/1:25,0:22:32.87:283,33,0	1/1:18,2:19:25.30:306,25,0	1/1:32,0:30:47.90:459,48,0	0/1:39,0:38:99:399,0,193	1/1:27,3:30:46.68:356,47,0	0/1:24,1:23:42.37:363,0,42	1/1:21,4:24:33.11:420,33,0	1/1:27,1:27:65.43:485,65,0	0/1:22,1:23:5.68:271,0,6	1/1:31,4:35:34.26:515,34,0	1/1:29,3:30:39.62:408,40,0	1/1:13,5:18:34.86:313,35,0	1/1:21,2:22:34.36:420,34,0	0/1:20,0:20:4.27:129,0,4	0/1:22,0:20:17.15:259,0,17	1/1:24,2:25:52.10:477,52,0	1/1:28,0:25:18.77:212,19,0	1/1:27,1:28:52.36:565,52,0	1/1:19,4:22:23.70:201,24,0	1/1:35,3:37:6.67:222,7,0	1/1:25,2:26:76.70:655,77,0	0/1:28,0:25:4.92:425,0,5	1/1:12,1:12:0.14:261,0,0	0/1:7,1:7:3:120,0,3
chr10	5761296	.	G	GTGTT	2439.02	PASS	AB=0.942;AC=26;AF=0.464;AN=56;BaseQRankSum=-0.759;DP=677;FS=59.955;HRun=0;HaplotypeScore=280.3687;InbreedingCoeff=-0.7285;MQ=37.64;MQ0=25;MQRankSum=1.398;QD=3.93;ReadPosRankSum=7.884;VQSLOD=0.6318;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:24:8.27:8,0,63	1/1:8,1:9:18.39:197,18,0	0/0:15,0:9:23.90:0,24,225	0/0:18,0:7:17.21:0,17,140	0/1:23,0:20:62.89:63,0,70	0/1:21,2:21:75.35:75,0,87	0/1:29,0:27:79.32:79,0,114	0/1:47,0:46:99:329,0,127	0/1:28,3:31:87.39:87,0,121	0/1:23,1:22:49.19:258,0,49	0/1:18,4:21:31.96:32,0,161	0/1:27,1:27:42.76:43,0,163	0/1:18,1:19:60.63:61,0,156	0/1:31,4:35:27.72:28,0,198	0/1:28,2:28:11.67:12,0,186	0/1:13,5:18:58.94:59,0,69	0/1:20,2:21:16.83:225,0,17	0/1:22,0:22:46.11:46,0,90	0/1:19,0:16:38.11:148,0,38	0/1:24,2:25:64.32:153,0,64	0/1:30,0:27:18.29:18,0,99	0/1:24,1:25:23.59:24,0,204	0/0:19,4:22:3.94:0,4,28	0/1:39,3:41:79.21:79,0,108	0/1:22,2:23:99:185,0,113	0/1:25,0:22:59.23:222,0,59	0/1:10,1:11:62.51:105,0,63	0/1:11,1:9:31.64:59,0,32
chr10	5761309	.	TGA	T	4340.55	PASS	AB=0.958;AC=45;AF=0.804;AN=56;BaseQRankSum=0.788;DP=665;FS=4.187;HRun=0;HaplotypeScore=246.5757;InbreedingCoeff=0.0217;MQ=37.20;MQ0=31;MQRankSum=4.068;QD=6.64;ReadPosRankSum=-3.534;VQSLOD=3.7496;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:25:30.01:199,30,0	0/1:10,0:10:12.55:98,0,13	0/0:5,0:1:2.98:0,3,21	0/0:6,0:1:0.89:0,1,2	1/1:23,0:21:19.12:140,19,0	1/1:24,0:21:23.51:170,24,0	1/1:31,0:28:17.09:171,17,0	0/1:45,0:42:99:319,0,119	1/1:30,0:30:31.68:298,32,0	0/1:20,0:18:99:146,0,110	1/1:26,0:25:20.76:157,21,0	1/1:28,0:27:21.65:155,22,0	1/1:20,0:19:12.59:215,13,0	1/1:35,0:35:35.61:265,36,0	1/1:33,0:31:39.14:281,39,0	0/1:21,0:21:0.46:53,0,0	0/1:23,0:22:95.05:95,0,119	1/1:24,0:23:11.71:171,12,0	0/1:11,8:17:63:108,0,63	1/1:30,0:28:38.21:278,38,0	1/1:29,0:26:9.09:56,9,0	1/1:22,0:22:20.58:157,21,0	1/1:8,15:22:2.72:8,3,0	1/1:39,0:39:4.04:145,4,0	1/1:26,0:24:32.96:274,33,0	1/1:23,0:20:5.06:259,5,0	1/1:11,0:10:2.01:78,2,0	0/1:12,0:8:43.75:44,0,67
chr10	5761311	.	A	AGTGTGT	3821.13	PASS	AB=1.000;AC=49;AF=0.942;AN=52;BaseQRankSum=-0.885;DP=677;FS=1.419;HRun=0;HaplotypeScore=296.6727;InbreedingCoeff=-0.0056;MQ=37.46;MQ0=34;MQRankSum=-0.192;QD=5.75;ReadPosRankSum=-0.177;VQSLOD=2.0986;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:24:6.82:58,7,0	1/1:10,0:10:6.01:77,6,0	./.	./.	1/1:26,0:24:19.27:234,19,0	1/1:21,0:18:15.35:161,15,0	1/1:31,0:28:11.44:105,11,0	1/1:45,0:42:13.57:65,14,0	1/1:32,0:32:36.69:491,37,0	1/1:22,0:20:9.47:119,9,0	1/1:25,0:24:12.01:118,12,0	1/1:29,0:28:14.77:167,15,0	1/1:21,0:19:30.52:362,31,0	1/1:35,0:35:20.78:226,21,0	1/1:33,0:31:27.58:328,28,0	1/1:14,6:22:3.01:36,3,0	0/1:24,0:23:40.99:41,0,187	1/1:24,0:23:20.93:259,21,0	1/1:21,0:19:8.05:89,8,0	1/1:29,0:27:15.91:187,16,0	1/1:29,0:26:5.13:46,5,0	1/1:23,0:23:13.12:78,13,0	1/1:23,0:22:0.83:2,1,0	0/1:40,0:40:11.67:257,0,12	1/1:26,0:24:14.94:169,15,0	1/1:24,0:22:4.39:12,4,0	1/1:11,0:10:11.29:86,11,0	0/1:12,0:8:48.39:48,0,51
chr10	5761317	.	T	TGTGTGA	5302.70	PASS	AB=0.987;AC=30;AF=0.556;AN=54;BaseQRankSum=-7.621;DP=687;FS=14.288;HRun=0;HaplotypeScore=291.5549;InbreedingCoeff=-0.4721;MQ=38.03;MQ0=40;MQRankSum=3.789;QD=8.62;ReadPosRankSum=2.750;VQSLOD=1.6351;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:28:15.72:16,0,123	0/1:11,0:11:57.23:74,0,57	./.	0/1:10,0:1:0:0,0,0	0/1:23,0:22:15.28:298,0,15	1/1:22,1:19:2.42:173,2,0	0/1:33,0:30:48.07:223,0,48	0/0:44,0:41:99:0,103,672	0/1:30,1:31:32.58:658,0,33	0/1:23,1:22:99:177,0,153	1/1:24,2:25:2.79:198,3,0	0/1:26,0:25:1.25:187,0,1	1/1:18,3:19:0.04:531,0,0	0/1:35,0:35:33.52:404,0,34	0/1:33,0:31:31.68:477,0,32	0/1:20,1:21:22.11:68,0,22	0/1:23,0:22:30.39:30,0,253	0/1:25,0:24:23.35:435,0,23	0/1:22,0:21:99:125,0,165	0/1:27,0:26:32.73:266,0,33	1/1:31,0:28:6.43:107,6,0	1/1:24,0:24:7.27:180,7,0	0/1:23,0:22:2.64:19,0,3	0/1:40,1:40:20.98:402,0,21	0/1:26,1:25:60.76:238,0,61	0/0:25,0:22:61.15:0,61,388	0/1:11,0:10:8.42:8,0,76	0/1:12,0:8:7.81:8,0,97
chr10	5761521	.	T	TA	2151.87	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-11.479;DP=670;FS=5.044;HRun=8;HaplotypeScore=139.5798;InbreedingCoeff=0.9978;MQ=74.02;MQ0=1;MQRankSum=0.732;QD=28.69;ReadPosRankSum=-1.909;VQSLOD=1.5667;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:84.04:0,84,768	0/0:10,0:10:24:0,24,220	0/0:21,0:21:28.58:0,29,342	0/0:20,0:21:29.77:0,30,239	0/0:29,0:29:80.96:0,81,730	0/0:31,0:31:81.02:0,81,737	0/0:22,0:22:60.01:0,60,543	1/1:2,15:17:48.12:539,48,0	0/0:23,0:23:54.02:0,54,494	0/0:39,0:39:99:0,114,1036	0/0:19,0:19:54.01:0,54,489	0/0:21,0:21:51.03:0,51,467	0/0:28,0:28:77.98:0,78,704	0/0:27,0:27:66.01:0,66,599	0/0:30,0:30:72.13:0,72,681	0/0:24,0:24:66.02:0,66,600	0/0:23,0:23:63.01:0,63,572	0/0:16,0:16:45.02:0,45,412	0/0:25,0:25:58.92:0,59,511	0/0:36,0:36:93.03:0,93,846	0/0:12,0:11:33.02:0,33,302	0/0:38,0:38:99:0,99,905	0/0:23,0:23:54.01:0,54,493	0/0:19,0:19:50.93:0,51,443	0/0:28,0:28:72.02:0,72,655	1/1:4,25:29:50.77:838,51,0	1/1:0,21:20:60.18:692,60,0	1/1:0,8:8:21.06:242,21,0
chr10	5761823	.	CTGTGTGTGTGTGTGTGTG	C	16622.47	PASS	AB=0.658;AC=38;AF=0.679;AN=56;BaseQRankSum=11.449;DP=585;FS=6.466;HRun=0;HaplotypeScore=283.0874;InbreedingCoeff=0.2735;MQ=61.18;MQ0=8;MQRankSum=-8.222;QD=36.53;ReadPosRankSum=4.332;VQSLOD=2.8314;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:43:63.11:0,63,4646	1/1:3,0:8:9.03:256,9,0	0/0:19,0:13:6.02:0,6,162	0/0:29,0:15:18.06:0,18,779	0/1:10,1:19:9.20:294,0,9	1/1:7,15:22:27.09:1288,27,0	0/1:10,12:22:73.49:671,0,73	0/0:24,0:24:36.11:0,36,675	1/1:11,12:23:27.09:1324,27,0	0/1:11,0:22:66.55:673,0,67	1/1:8,0:16:7.80:294,8,0	1/1:14,0:24:2.14:822,2,0	1/1:6,1:15:20.08:740,20,0	1/1:8,1:14:18.06:575,18,0	1/1:7,15:22:39.13:1875,39,0	1/1:5,13:18:27.09:1252,27,0	0/0:11,0:14:27.02:0,27,649	0/1:7,0:14:48.89:200,0,49	1/1:20,8:29:26.99:833,27,0	1/1:14,12:26:24.06:1055,24,0	1/1:8,0:14:9.03:201,9,0	1/1:6,11:17:32.97:1145,33,0	1/1:5,0:10:5.81:149,6,0	0/1:11,0:23:12.36:326,0,12	1/1:9,18:27:36.12:1606,36,0	0/1:11,0:21:99:363,0,194	0/1:13,0:30:99:520,0,256	0/1:7,0:16:16.18:163,0,16
chr10	5764207	.	AG	A	15455.16	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=4.854;DP=595;FS=11.334;HRun=1;HaplotypeScore=81.9588;InbreedingCoeff=0.9994;MQ=87.71;MQ0=0;MQRankSum=-3.830;QD=35.21;ReadPosRankSum=5.012;VQSLOD=4.1478;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,99,1472	1/1:0,13:13:26.82:377,27,0	0/0:20,0:20:43.11:0,43,630	0/0:24,0:23:66.13:0,66,907	1/1:1,21:22:56.55:654,57,0	1/1:0,26:26:66.18:901,66,0	1/1:0,19:19:51.17:713,51,0	0/0:18,0:18:54.17:0,54,805	1/1:0,17:17:42.14:587,42,0	1/1:0,21:21:63.16:841,63,0	1/1:0,17:17:45.05:628,45,0	1/1:0,22:22:57.19:797,57,0	1/1:0,30:30:78.26:1090,78,0	1/1:0,28:28:63.20:881,63,0	1/1:0,35:35:99:1384,99,0	1/1:0,19:19:39.13:545,39,0	1/1:0,34:34:87.29:1216,87,0	1/1:0,23:23:51.17:713,51,0	1/1:0,10:10:30.06:384,30,0	1/1:1,19:20:53.91:731,54,0	1/1:0,18:18:42.14:587,42,0	1/1:0,11:11:30.10:419,30,0	1/1:3,15:18:54.15:708,54,0	1/1:0,19:19:54.18:755,54,0	1/1:0,17:17:39.13:545,39,0	0/0:14,0:14:42.13:0,42,623	0/0:37,0:37:99:0,111,1665	0/0:9,0:9:27.09:0,27,412
chr10	5764686	.	AG	A	1813.97	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-4.262;DP=811;FS=5.205;HRun=2;HaplotypeScore=117.9836;InbreedingCoeff=1.0000;MQ=87.14;MQ0=0;MQRankSum=-3.847;QD=33.59;ReadPosRankSum=1.949;VQSLOD=3.2050;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,54:54:99:1909,147,0	0/0:15,0:15:45.15:0,45,674	0/0:31,0:31:84.23:0,84,1185	0/0:24,0:24:66.21:0,66,937	0/0:30,0:30:90.30:0,90,1349	0/0:29,0:29:87.29:0,87,1304	0/0:25,0:25:75.25:0,75,1123	0/0:36,0:36:99:0,102,1493	0/0:29,0:29:87.29:0,87,1303	0/0:28,0:28:81.27:0,81,1192	0/0:22,0:22:66.22:0,66,989	0/0:37,0:37:99:0,108,1590	0/0:27,0:27:78.22:0,78,1141	0/0:37,0:37:99:0,111,1640	0/0:29,0:29:87.29:0,87,1303	0/0:25,0:25:75.24:0,75,1103	0/0:31,0:31:93.30:0,93,1373	0/0:16,0:16:48.16:0,48,718	0/0:25,0:25:75.25:0,75,1124	0/0:31,0:31:93.31:0,93,1392	0/0:38,0:38:99:0,102,1527	0/0:33,0:33:96.31:0,96,1419	0/0:24,0:24:69.23:0,69,1031	0/0:37,0:37:99:0,111,1643	0/0:32,0:32:93.31:0,93,1392	0/0:19,0:19:57.19:0,57,855	0/0:28,0:28:78.25:0,78,1146	0/0:19,0:19:54.18:0,54,809
chr10	5765711	.	AT	A	8770.21	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=5.140;DP=604;FS=6.084;HRun=8;HaplotypeScore=103.4169;InbreedingCoeff=0.9861;MQ=85.35;MQ0=0;MQRankSum=-3.337;QD=25.06;ReadPosRankSum=1.331;VQSLOD=4.8921;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:2,0:32:74.75:0,75,380	1/1:0,11:11:24.04:232,24,0	0/0:20,0:20:51.13:0,51,577	0/0:19,0:19:6.79:0,7,329	1/1:4,26:30:78.12:753,78,0	0/0:30,1:31:52.27:0,52,904	0/0:14,0:14:36.11:0,36,435	1/1:4,23:27:69.11:666,69,0	0/0:19,0:19:57.16:0,57,677	1/1:5,21:26:63.09:608,63,0	1/1:1,27:28:75.11:724,75,0	1/1:2,17:19:48.08:463,48,0	1/1:2,15:17:42.06:405,42,0	1/1:2,22:24:63.10:608,63,0	0/0:23,0:23:60.18:0,60,725	0/0:24,0:24:62.93:0,63,737	1/1:5,29:34:78.12:753,78,0	1/1:0,12:12:36.06:348,36,0	0/0:10,0:10:21.06:0,21,254	0/0:26,0:26:75.23:0,75,906	1/1:2,24:26:63.10:608,63,0	0/0:18,0:18:45.14:0,45,543	1/1:1,20:21:57.09:550,57,0	1/1:0,13:13:39.06:377,39,0	0/0:18,0:18:45.14:0,45,544	1/1:3,25:28:75.10:717,75,0	1/1:0,25:25:75.12:724,75,0	1/1:1,8:9:24.04:232,24,0
chr10	5766072	.	TA	T	7151.43	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=-4.039;DP=439;FS=3.651;HRun=7;HaplotypeScore=48.0698;InbreedingCoeff=0.9287;MQ=65.06;MQ0=2;MQRankSum=-0.329;QD=23.76;ReadPosRankSum=5.819;VQSLOD=4.5977;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:87.19:0,87,1070	1/1:3,7:10:21.04:214,21,0	0/0:11,0:8:17.89:0,18,210	0/0:8,0:6:8.60:0,9,106	1/1:0,32:32:87.19:886,87,0	1/1:3,12:15:30.07:306,30,0	1/1:3,6:9:12.03:122,12,0	0/0:30,0:29:81.21:0,81,978	1/1:2,10:12:30.06:306,30,0	1/1:5,20:24:60.13:612,60,0	1/1:0,19:19:51.11:519,51,0	1/1:2,5:7:12.03:122,12,0	1/1:6,12:18:33.07:337,33,0	1/1:0,12:12:30.07:306,30,0	1/1:3,10:13:24.05:245,24,0	1/1:1,7:8:15.03:153,15,0	1/1:2,22:24:54.12:551,54,0	1/1:1,9:10:27.06:275,27,0	1/1:3,20:22:60.13:612,60,0	1/1:2,17:19:42.09:428,42,0	1/1:0,4:4:12.03:122,12,0	1/1:5,3:8:21.03:208,21,0	1/1:0,8:8:21.05:214,21,0	1/1:0,8:8:15.03:153,15,0	1/1:1,16:17:45.10:459,45,0	0/0:32,0:32:84.27:0,84,1057	0/0:27,0:27:78.22:0,78,954	0/0:1,0:1:3.01:0,3,38
chr10	5766171	.	G	GGTTAAA	35943.99	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-5.437;DP=474;FS=0.579;HRun=0;HaplotypeScore=94.8567;InbreedingCoeff=0.9690;MQ=73.00;MQ0=0;MQRankSum=-10.817;QD=85.79;ReadPosRankSum=0.247;VQSLOD=5.8690;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:72.19:0,72,1731	1/1:0,6:6:18.06:648,18,0	0/0:17,0:17:42.14:0,42,986	0/0:13,0:13:32.60:0,33,718	1/1:13,17:30:69.20:2133,69,0	1/1:0,22:22:66.23:2374,66,0	1/1:8,10:19:51.18:1643,51,0	1/1:10,15:28:81.26:2655,81,0	1/1:6,19:29:72.25:2485,72,0	1/1:8,12:22:60.16:2017,60,0	1/1:5,11:16:48.12:1519,48,0	1/1:3,8:11:33.11:1104,33,0	1/1:3,15:21:51.18:1799,51,0	1/1:5,12:17:48.16:1651,48,0	1/1:7,8:16:39.13:1311,39,0	1/1:3,14:17:45.15:1608,45,0	1/1:11,5:16:21.04:592,21,0	1/1:1,7:8:18.06:648,18,0	1/1:3,14:20:51.17:1808,51,0	1/1:5,6:10:24.95:652,25,0	1/1:3,10:14:27.05:780,27,0	1/1:2,5:9:21.07:670,21,0	1/1:1,10:11:33.11:1158,33,0	1/1:3,5:9:12.09:331,12,0	1/1:1,13:17:39.13:1403,39,0	1/1:3,20:24:69.24:2466,69,0	1/1:5,15:21:60.21:2059,60,0	1/1:1,3:4:12.04:432,12,0
chr10	5766325	.	A	AG	24640.63	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-7.758;DP=604;FS=3.643;HRun=0;HaplotypeScore=58.8717;InbreedingCoeff=0.9875;MQ=74.00;MQ0=0;MQRankSum=-7.639;QD=42.70;ReadPosRankSum=3.771;VQSLOD=5.5050;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,42:42:99:1867,117,0	1/1:0,9:9:21.07:335,21,0	0/0:19,0:19:57.13:0,57,740	0/0:8,0:8:24.07:0,24,321	1/1:0,24:24:72.25:1149,72,0	1/1:1,24:25:72.07:1084,72,0	1/1:1,17:18:45.15:717,45,0	1/1:0,35:35:99:1620,105,0	1/1:0,27:27:75.26:1192,75,0	1/1:0,28:27:75.23:1134,75,0	1/1:0,17:17:51.17:815,51,0	1/1:0,22:22:60.12:925,60,0	1/1:0,25:25:69.24:1095,69,0	1/1:0,20:20:57.02:845,57,0	1/1:2,14:16:36.12:572,36,0	1/1:0,26:26:78.27:1230,78,0	1/1:0,17:17:42.14:670,42,0	1/1:0,14:14:33.11:525,33,0	1/1:1,13:14:36.11:550,36,0	1/1:0,22:22:63.15:964,63,0	1/1:0,31:31:75.26:1198,75,0	1/1:1,8:9:24.08:383,24,0	1/1:0,14:14:42.14:671,42,0	1/1:1,34:35:84.29:1341,84,0	1/1:0,25:25:60.20:959,60,0	1/1:0,32:32:93.30:1455,93,0	1/1:0,25:25:72.16:1106,72,0	1/1:0,5:5:15.05:240,15,0
chr10	5766465	.	GCA	G	1449.91	PASS	AB=0.990;AC=32;AF=0.571;AN=56;BaseQRankSum=-0.087;DP=662;FS=11.206;HRun=0;HaplotypeScore=130.6066;InbreedingCoeff=0.3860;MQ=50.20;MQ0=14;MQRankSum=0.773;QD=3.62;ReadPosRankSum=-0.838;VQSLOD=1.3995;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:35,0:34:2.80:13,3,0	1/1:9,0:9:2.49:9,2,0	0/0:48,0:12:27.01:0,27,349	0/0:57,0:15:15.01:0,15,185	1/1:20,0:20:4.56:18,5,0	1/1:18,0:17:2.82:14,3,0	0/0:32,0:32:8.09:0,8,52	1/1:16,18:33:34.51:611,35,0	1/1:28,0:28:2.79:31,3,0	0/0:21,0:20:2.80:0,3,17	0/0:17,0:17:0:0,0,0	0/1:15,0:14:0.78:6,0,1	1/1:22,0:22:5.60:27,6,0	0/1:14,0:15:7.39:7,0,19	1/1:24,0:24:2.25:13,2,0	1/1:28,0:27:5.39:24,5,0	0/0:26,0:26:0.51:0,1,2	0/1:20,0:20:5.47:10,0,5	1/1:10,0:9:2.80:13,3,0	0/0:19,0:19:6.70:0,7,31	0/0:30,0:29:4.24:0,4,28	0/1:14,0:14:0:0,0,0	0/0:12,0:12:2.99:0,3,24	0/1:44,0:44:5.48:7,0,5	0/1:15,0:15:0:0,0,0	1/1:5,15:20:42.36:502,42,0	1/1:17,5:23:29.47:260,29,0	1/1:5,0:5:3.01:35,3,0
chr10	5766472	.	CACACACACACACACAT	C	3978.55	PASS	AB=1.000;AC=34;AF=0.630;AN=54;BaseQRankSum=-0.576;DP=697;FS=9.410;HRun=0;HaplotypeScore=222.1391;InbreedingCoeff=0.0535;MQ=49.85;MQ0=18;MQRankSum=3.301;QD=8.04;ReadPosRankSum=1.752;VQSLOD=1.6449;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:35:3.01:0,3,70	0/1:11,0:11:21.35:21,0,61	0/0:46,0:11:17.88:0,18,142	0/0:56,0:14:11.67:0,12,93	0/0:24,0:24:3.84:0,4,13	1/1:16,0:15:28.51:355,29,0	1/1:30,0:30:1.90:285,2,0	0/1:40,0:38:99:110,0,534	1/1:6,27:33:13.40:455,13,0	0/1:19,0:18:95.37:95,0,138	0/1:20,0:20:0:0,0,0	0/1:15,0:14:23.71:160,0,24	1/1:24,0:24:5.27:113,5,0	1/1:23,0:23:5.49:49,5,0	1/1:25,1:26:56.84:808,57,0	1/1:10,19:27:9.03:308,9,0	0/1:32,0:32:14.27:14,0,28	0/1:20,0:20:99:194,0,188	1/1:7,1:7:7.83:165,8,0	1/1:18,0:18:23.83:180,24,0	1/1:31,0:29:21.37:163,21,0	1/1:2,13:15:3.01:102,3,0	./.	0/1:41,0:40:99:227,0,113	1/1:3,13:16:3.01:105,3,0	0/1:22,0:22:57.89:58,0,720	0/0:28,0:27:2.44:0,2,486	0/1:6,0:6:11.60:12,0,59
chr10	5766474	.	CACACACACACACAT	C	4348.55	PASS	AB=0.994;AC=37;AF=0.685;AN=54;BaseQRankSum=-1.386;DP=698;FS=25.725;HRun=0;HaplotypeScore=203.7936;InbreedingCoeff=0.1228;MQ=49.79;MQ0=19;MQRankSum=4.036;QD=8.41;ReadPosRankSum=2.967;VQSLOD=2.2344;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:38:3.01:0,3,53	0/1:11,0:11:7.18:95,0,7	0/0:45,0:10:17.88:0,18,142	0/0:56,0:14:11.67:0,12,93	1/1:27,0:27:5.89:39,6,0	1/1:16,0:15:29.96:349,30,0	1/1:30,0:30:3.03:285,3,0	0/1:39,0:37:99:110,0,342	0/1:30,1:32:13:382,0,13	1/1:19,0:18:21.47:228,21,0	0/1:20,0:20:0:0,0,0	1/1:13,2:13:2.02:232,2,0	1/1:24,1:25:5.76:184,6,0	1/1:21,0:21:5.93:119,6,0	1/1:27,0:27:59.94:718,60,0	1/1:29,0:27:9.02:229,9,0	0/1:32,0:32:21.17:40,0,21	0/1:20,0:20:46.71:286,0,47	1/1:7,0:6:8.05:134,8,0	1/1:18,0:18:23.83:180,24,0	1/1:30,0:28:23.89:186,24,0	1/1:14,0:14:3.01:70,3,0	./.	0/1:40,1:40:2.25:328,0,2	1/1:15,0:15:3.01:72,3,0	0/1:21,0:21:74.19:74,0,536	0/0:30,0:29:4.67:0,5,310	0/1:8,0:8:8.59:9,0,83
chr10	5766476	.	CACACACACACAT	C	4834.90	PASS	AB=0.937;AC=42;AF=0.778;AN=54;BaseQRankSum=-1.253;DP=684;FS=32.151;HRun=0;HaplotypeScore=184.5388;InbreedingCoeff=0.1627;MQ=49.65;MQ0=19;MQRankSum=4.222;QD=8.41;ReadPosRankSum=4.538;VQSLOD=2.5589;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:37,0:36:2.24:2,0,22	1/1:10,1:11:11.99:175,12,0	0/0:44,0:10:17.88:0,18,142	0/0:54,0:13:11.67:0,12,93	1/1:29,0:29:6.02:91,6,0	1/1:15,0:14:29.96:321,30,0	1/1:27,0:27:28.81:286,29,0	0/1:39,0:37:99:108,0,207	0/1:31,0:31:13.38:308,0,13	1/1:19,0:18:42.10:305,42,0	0/1:2,18:20:0:0,0,0	1/1:15,1:14:23.92:312,24,0	1/1:4,21:25:5.35:196,5,0	1/1:3,19:22:5.86:131,6,0	1/1:27,0:27:58.64:616,59,0	1/1:28,0:26:8.98:192,9,0	0/1:30,1:31:12.99:84,0,13	1/1:18,1:20:2.71:399,3,0	1/1:7,0:6:8.38:122,8,0	1/1:17,0:17:23.83:180,24,0	1/1:29,0:27:23.89:186,24,0	1/1:13,0:13:3.01:56,3,0	./.	1/1:36,4:39:53.25:602,53,0	1/1:15,0:15:3.01:58,3,0	0/1:22,0:22:74.41:74,0,328	0/1:30,0:29:19.28:19,0,125	0/1:5,0:5:9.26:9,0,20
chr10	5766478	.	CACACACACAT	C	4761.48	PASS	AB=0.929;AC=41;AF=0.759;AN=54;BaseQRankSum=0.706;DP=691;FS=37.597;HRun=0;HaplotypeScore=175.3548;InbreedingCoeff=0.2138;MQ=49.76;MQ0=20;MQRankSum=3.299;QD=8.66;ReadPosRankSum=5.545;VQSLOD=2.2409;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:36:0.47:0,0,1	1/1:14,0:14:14.94:162,15,0	0/0:42,0:10:17.88:0,18,142	0/0:51,0:10:11.67:0,12,93	1/1:3,25:28:6.02:179,6,0	1/1:15,0:14:29.96:293,30,0	1/1:27,0:27:31.30:294,31,0	0/1:41,0:38:97.66:124,0,98	0/1:31,0:31:29.71:252,0,30	1/1:20,0:19:45.88:341,46,0	0/1:20,0:20:0:0,0,0	1/1:19,0:17:32.90:338,33,0	1/1:25,0:25:5.39:150,5,0	1/1:22,0:22:5.70:87,6,0	1/1:27,0:27:59.77:579,60,0	1/1:27,0:25:8.96:163,9,0	0/1:4,28:32:8.57:52,0,9	0/1:21,0:22:3.46:391,0,3	1/1:7,0:6:8.51:109,9,0	1/1:17,0:17:23.83:180,24,0	1/1:30,0:28:26.89:211,27,0	1/1:13,0:13:3.01:42,3,0	./.	1/1:43,0:42:56.04:530,56,0	1/1:14,0:14:3.01:44,3,0	0/1:22,0:22:99:142,0,130	0/1:28,0:28:3:65,0,3	1/1:5,0:5:5.80:33,6,0
chr10	5766482	.	CACACAT	C	5116.65	PASS	AB=1.000;AC=46;AF=0.852;AN=54;BaseQRankSum=1.035;DP=678;FS=31.173;HRun=0;HaplotypeScore=147.3177;InbreedingCoeff=0.3818;MQ=49.86;MQ0=21;MQRankSum=4.179;QD=8.70;ReadPosRankSum=3.662;VQSLOD=2.4670;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:5,31:35:5.51:78,6,0	1/1:15,0:15:17.76:153,18,0	0/0:40,0:10:17.88:0,18,142	0/0:41,0:5:11.67:0,12,93	1/1:27,0:27:6.02:87,6,0	1/1:14,0:13:29.87:252,30,0	1/1:23,0:23:31.24:282,31,0	0/1:38,0:35:49.24:127,0,49	0/1:31,0:31:4.06:146,0,4	1/1:21,0:20:52.62:400,53,0	0/1:19,0:19:0:0,0,0	1/1:18,0:16:35.89:307,36,0	1/1:24,0:24:6.02:95,6,0	1/1:22,0:22:0.52:43,1,0	1/1:29,0:29:62.78:523,63,0	1/1:25,0:23:8.96:107,9,0	0/1:32,0:32:1.81:25,0,2	1/1:23,0:23:27.72:424,28,0	1/1:9,0:8:17.39:163,17,0	1/1:20,0:19:26.83:205,27,0	1/1:32,0:30:32.88:263,33,0	1/1:13,0:13:2.94:18,3,0	./.	1/1:46,0:44:62.41:519,62,0	1/1:14,0:14:2.97:20,3,0	1/1:22,0:22:12.82:405,13,0	1/1:29,0:28:21.27:405,21,0	1/1:6,0:6:11.75:73,12,0
chr10	5766483	.	A	AATG	470.09	PASS	AB=0.967;AC=8;AF=0.143;AN=56;BaseQRankSum=3.143;DP=674;FS=19.547;HRun=0;HaplotypeScore=151.2697;InbreedingCoeff=-0.0188;MQ=49.84;MQ0=21;MQRankSum=-5.178;QD=3.09;ReadPosRankSum=-2.191;VQSLOD=1.2519;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:34:8.20:0,8,56	0/0:15,0:15:17.65:0,18,283	0/0:38,0:10:30.10:0,30,546	0/0:41,0:5:15.05:0,15,279	0/0:27,0:27:8.71:0,9,77	0/1:15,0:14:93.38:93,0,420	0/1:22,3:25:99:288,0,598	0/0:38,0:35:99:0,105,1357	0/1:31,0:31:18.34:18,0,34	0/0:22,0:21:57.15:0,57,979	0/0:19,0:19:2.97:0,3,23	0/0:18,0:16:37.65:0,38,613	0/0:24,0:24:5.96:0,6,46	0/0:22,0:22:11.79:0,12,144	0/1:26,1:29:97.04:97,0,785	0/1:25,0:23:65.11:65,0,73	0/0:31,0:31:8.24:0,8,88	0/0:24,0:24:69.17:0,69,1138	0/0:7,0:6:14.62:0,15,161	0/0:19,0:18:30.09:0,30,542	0/0:30,0:28:35.96:0,36,621	1/1:13,0:13:2.98:21,3,0	0/0:9,0:9:3.01:0,3,56	0/0:45,0:43:65.82:0,66,1140	0/1:14,0:14:17.39:17,0,37	0/0:22,0:22:60.14:0,60,732	0/0:30,0:29:35.92:0,36,379	0/0:6,0:6:11.99:0,12,153
chr10	5766486	.	CAT	C	4586.83	PASS	AB=1.000;AC=49;AF=0.875;AN=56;BaseQRankSum=1.769;DP=651;FS=18.074;HRun=0;HaplotypeScore=123.1091;InbreedingCoeff=0.4345;MQ=49.99;MQ0=21;MQRankSum=3.648;QD=7.87;ReadPosRankSum=2.374;VQSLOD=3.5345;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:33,0:32:5.36:30,5,0	1/1:16,0:16:17.83:128,18,0	0/0:32,0:8:17.89:0,18,142	0/0:36,0:5:11.67:0,12,93	1/1:25,0:25:5.89:37,6,0	1/1:16,0:15:32.78:247,33,0	1/1:24,0:24:34.18:302,34,0	0/1:35,0:32:39.37:141,0,39	1/1:31,0:31:15.89:91,16,0	1/1:22,0:21:61.16:473,61,0	0/1:18,0:18:0:0,0,0	1/1:18,0:16:35.74:269,36,0	1/1:23,0:23:5.92:39,6,0	1/1:21,0:21:2.77:20,3,0	1/1:30,1:31:71.64:554,72,0	1/1:22,0:20:8.76:51,9,0	0/1:30,0:30:5.23:12,0,5	1/1:24,0:24:65.23:466,65,0	1/1:7,0:6:16.99:133,17,0	1/1:20,0:19:26.78:204,27,0	1/1:30,0:28:32.80:263,33,0	1/1:13,0:13:2.90:16,3,0	1/1:10,0:10:5.98:48,6,0	1/1:44,0:42:62.57:489,63,0	1/1:13,0:13:2.92:17,3,0	1/1:23,0:23:41.23:334,41,0	1/1:15,14:28:21.04:151,21,0	1/1:5,0:5:11.75:73,12,0
chr10	5766488	.	TACAC	T	926.36	PASS	AB=0.990;AC=31;AF=0.620;AN=50;BaseQRankSum=4.243;DP=660;FS=27.321;HRun=0;HaplotypeScore=147.2285;InbreedingCoeff=-0.1047;MQ=49.82;MQ0=21;MQRankSum=-3.955;QD=1.96;ReadPosRankSum=5.578;VQSLOD=0.8277;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:35,0:34:2.91:24,3,0	1/1:16,0:16:2.85:22,3,0	./.	./.	1/1:26,0:26:5.92:42,6,0	0/1:16,0:15:18.49:21,0,18	0/0:23,0:23:3.26:0,3,30	0/0:34,0:31:1.86:0,2,9	0/1:31,0:31:9.25:69,0,9	0/1:22,0:21:0.26:3,0,0	0/0:19,0:19:2.99:0,3,24	0/1:20,0:17:16.53:24,0,17	0/1:23,0:23:6.52:44,0,7	0/1:22,0:22:17.46:17,0,33	0/1:35,0:35:19.21:19,0,47	0/1:23,0:21:14.97:41,0,15	1/1:30,0:30:2.97:9,3,0	0/1:24,0:24:18.10:18,0,37	0/1:9,0:8:11.05:19,0,11	./.	0/0:30,0:28:4.60:0,5,37	1/1:13,0:13:0.47:1,0,0	1/1:10,0:10:1.29:4,1,0	1/1:45,0:43:2.05:25,2,0	1/1:14,0:14:0.89:2,1,0	0/1:20,3:23:2:216,0,2	1/1:24,4:28:20.88:289,21,0	1/1:6,0:6:14.96:149,15,0
chr10	5767221	.	G	GCA	332.99	PASS	AB=1.000;AC=7;AF=0.130;AN=54;BaseQRankSum=0.407;DP=156;FS=0.000;HRun=0;HaplotypeScore=58.2928;InbreedingCoeff=0.5724;MQ=72.29;MQ0=0;MQRankSum=-3.434;QD=19.59;ReadPosRankSum=1.139;VQSLOD=3.2347;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:2,0:2:0:0,0,0	0/0:4,0:4:12.03:0,12,171	0/0:6,0:6:15.35:0,15,211	0/0:5,0:6:14.83:0,15,131	0/0:4,0:4:6.02:0,6,98	0/0:4,0:4:12.03:0,12,170	0/0:10,0:10:21.04:0,21,290	1/1:1,4:5:15.04:243,15,0	0/0:6,0:6:15.05:0,15,243	0/0:4,0:4:12.03:0,12,174	0/0:7,0:7:11.29:0,11,166	0/0:3,0:3:6.02:0,6,98	0/0:4,0:4:12.02:0,12,163	0/0:8,0:8:24.07:0,24,358	0/0:8,0:8:24.07:0,24,366	0/0:7,0:7:21.02:0,21,245	1/1:0,5:5:3.01:43,3,0	0/0:7,0:7:21.07:0,21,338	0/0:4,0:3:9.03:0,9,146	0/0:4,0:4:9.02:0,9,121	0/0:15,0:15:19.18:0,19,246	0/0:7,0:7:12.03:0,12,159	0/0:3,0:3:6.02:0,6,95	0/0:10,0:10:11.24:0,11,193	0/0:6,0:6:18.03:0,18,223	0/1:2,0:2:13.98:14,0,43	1/1:0,4:5:9.03:159,9,0	./.
chr10	5772763	.	T	TAAAAAAA	4342.34	PASS	AB=0.740;AC=37;AF=0.685;AN=54;BaseQRankSum=-0.178;DP=282;FS=13.118;HRun=4;HaplotypeScore=110.9344;InbreedingCoeff=-0.1624;MQ=81.11;MQ0=2;MQRankSum=-5.314;QD=17.10;ReadPosRankSum=0.931;VQSLOD=0.5919;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,0:8:6.02:135,6,0	1/1:1,0:4:11.82:81,12,0	0/0:6,0:5:9.03:0,9,148	0/0:21,0:15:29.55:0,30,417	0/1:11,0:23:36.73:316,0,37	1/1:7,0:17:20.79:284,21,0	0/1:6,0:7:6.14:108,0,6	1/1:14,1:21:51.15:1167,51,0	1/1:3,0:10:29.60:207,30,0	0/1:8,0:17:80.14:154,0,80	0/1:7,0:11:22.15:113,0,22	0/1:6,0:11:68.94:69,0,81	0/1:3,0:7:5.31:116,0,5	0/1:5,0:11:61.74:114,0,62	0/1:9,0:13:15.64:122,0,16	1/1:3,0:5:11.83:96,12,0	1/1:6,0:6:14.10:99,14,0	0/1:12,0:18:42.22:147,0,42	0/1:9,0:15:33.98:170,0,34	1/1:1,0:12:26.10:191,26,0	./.	0/1:5,0:5:16.03:16,0,61	0/1:4,0:5:17:45,0,17	1/1:0,0:1:2.90:16,3,0	0/1:6,0:12:21.52:147,0,22	1/1:5,0:6:6:77,6,0	1/1:2,0:4:6.02:121,6,0	1/1:2,0:3:9.03:230,9,0
chr10	5772779	.	A	ATG	6132.82	PASS	AB=0.886;AC=42;AF=0.750;AN=56;BaseQRankSum=-2.012;DP=284;FS=1.355;HRun=0;HaplotypeScore=72.3281;InbreedingCoeff=0.5002;MQ=76.82;MQ0=2;MQRankSum=0.238;QD=25.66;ReadPosRankSum=5.900;VQSLOD=5.4178;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:4:5.98:0,6,47	1/1:0,5:5:12.04:195,12,0	0/1:5,0:4:0.61:1,0,22	0/1:20,0:13:17.79:18,0,141	1/1:1,21:22:45.15:696,45,0	1/1:0,15:15:36.12:575,36,0	1/1:3,6:9:6.02:101,6,0	0/0:21,0:19:50.33:0,50,334	1/1:5,7:12:30.06:402,30,0	1/1:2,15:17:32.57:620,33,0	1/1:0,7:7:12.04:208,12,0	0/1:6,5:11:15.87:278,0,16	1/1:1,8:9:13.88:250,14,0	1/1:7,6:13:29.49:425,29,0	1/1:7,4:11:25.87:351,26,0	1/1:1,4:5:9.03:159,9,0	0/0:7,0:7:2.98:0,3,22	1/1:1,14:16:22.30:399,22,0	1/1:4,10:14:8.43:377,8,0	1/1:8,5:13:30.02:368,30,0	1/1:2,0:2:5.99:50,6,0	1/1:4,0:4:8.42:74,8,0	1/1:4,1:5:12.01:141,12,0	1/1:1,1:2:6.01:76,6,0	1/1:2,12:15:20.49:341,20,0	0/1:5,1:6:27.88:28,0,94	0/0:5,0:5:5.98:0,6,48	0/0:8,0:8:14.66:0,15,92
chr10	5773223	.	GGTGT	G	713.37	PASS	AB=0.954;AC=11;AF=0.212;AN=52;BaseQRankSum=-2.483;DP=893;FS=0.892;HRun=0;HaplotypeScore=120.0517;InbreedingCoeff=-0.1477;MQ=21.61;MQ0=292;MQRankSum=0.492;QD=2.21;ReadPosRankSum=-0.547;VQSLOD=2.3736;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:19:9.03:0,9,137	0/1:17,0:8:16.37:16,0,119	./.	./.	1/1:30,0:20:2.84:14,3,0	0/1:27,2:13:7.93:8,0,161	0/0:46,0:19:17.67:0,18,396	0/1:35,8:24:99:336,0,118	0/0:32,2:20:0.52:0,1,160	0/0:52,0:24:37.39:0,37,863	0/0:28,0:21:5.66:0,6,88	0/1:26,0:10:7:7,0,23	0/0:24,0:10:8.22:0,8,78	0/0:40,0:16:16.03:0,16,197	0/0:39,0:16:7.50:0,7,92	0/1:30,0:16:59.58:60,0,184	0/1:21,3:15:91.17:91,0,150	0/0:20,0:7:5.69:0,6,43	0/1:34,0:23:99:279,0,409	0/0:21,0:12:6.02:0,6,121	0/0:82,0:31:11.52:0,12,186	0/0:30,1:17:1.90:0,2,12	0/0:30,0:24:0.71:0,1,2	0/1:39,0:17:0.62:1,0,38	0/0:41,0:32:12.61:0,13,351	0/1:41,2:18:27.98:28,0,236	0/0:17,2:10:6.02:0,6,109	0/0:15,1:5:6.02:0,6,117
chr10	5773232	.	GTGTGGT	G	623.92	PASS	AB=0.949;AC=11;AF=0.204;AN=54;BaseQRankSum=-1.046;DP=932;FS=1.786;HRun=0;HaplotypeScore=112.5288;InbreedingCoeff=-0.1193;MQ=19.42;MQ0=337;MQRankSum=-0.212;QD=1.99;ReadPosRankSum=-1.749;VQSLOD=2.1460;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:16:1.96:2,0,225	0/1:16,0:9:29.19:29,0,131	./.	0/0:8,0:2:5.98:0,6,67	1/1:30,0:18:2.84:14,3,0	0/1:23,5:12:2.17:2,0,170	0/0:52,0:17:17.67:0,18,506	0/1:48,0:18:99:236,0,166	0/0:24,6:15:11.05:0,11,217	0/0:56,0:25:10.16:0,10,958	0/0:29,0:21:5.92:0,6,126	0/1:26,0:9:26.90:27,0,30	0/0:27,0:7:3.97:0,4,98	0/0:44,0:16:13.76:0,14,208	0/0:37,4:16:11.75:0,12,127	0/1:27,3:14:74.64:75,0,265	0/1:22,0:11:23.48:23,0,226	0/0:17,0:3:8.70:0,9,94	0/1:33,8:21:99:328,0,513	0/0:24,1:12:6.02:0,6,160	0/0:90,0:32:10.75:0,11,243	0/0:29,0:16:1.20:0,1,11	0/0:31,0:22:0.34:0,0,1	0/1:41,0:15:17.48:17,0,38	0/0:48,3:36:14.02:0,14,387	0/0:50,0:17:17.32:0,17,364	0/0:14,0:6:9.01:0,9,191	0/0:16,0:5:5.65:0,6,204
chr10	5773275	.	GGTC	G	83.03	PASS	AB=0.974;AC=15;AF=0.395;AN=38;BaseQRankSum=1.549;DP=400;FS=12.248;HRun=0;HaplotypeScore=37.6475;InbreedingCoeff=0.1132;MQ=34.78;MQ0=105;MQRankSum=0.052;QD=0.36;ReadPosRankSum=-0.236;VQSLOD=-0.1571;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/0:6,0:4:2.68:0,3,11	0/1:69,3:11:37.90:38,0,308	0/1:73,4:10:0.03:0,0,160	./.	1/1:6,0:3:3.01:32,3,0	0/0:23,0:7:0:0,0,0	./.	./.	0/0:17,0:9:5.52:0,6,113	0/0:11,1:10:0.39:0,0,1	1/1:9,0:4:7.59:40,8,0	0/1:10,0:6:2.42:2,0,7	0/1:14,0:5:13:13,0,34	./.	./.	1/1:3,1:2:2.68:11,3,0	./.	0/1:9,1:2:35.21:46,0,35	./.	0/0:34,1:18:5.97:0,6,44	0/1:8,0:4:0:0,0,0	0/1:11,0:6:0:0,0,0	0/0:16,0:8:2.04:0,2,6	0/0:6,0:1:2.94:0,3,18	0/0:7,0:1:3.01:0,3,30	1/1:4,1:2:1.25:3,1,0	./.
chr10	5773276	.	GTC	G	132.29	PASS	AB=0.921;AC=19;AF=0.633;AN=30;BaseQRankSum=0.187;DP=340;FS=7.509;HRun=0;HaplotypeScore=35.2292;InbreedingCoeff=0.2244;MQ=37.21;MQ0=68;MQRankSum=1.309;QD=0.64;ReadPosRankSum=0.021;VQSLOD=-0.3545;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:74,0:11:3.26:0,3,225	0/1:77,0:10:7.10:7,0,97	./.	0/1:2,0:1:0:0,0,0	1/1:20,0:6:0.47:1,0,0	./.	1/1:6,1:3:2.90:16,3,0	1/1:14,1:8:14.05:99,14,0	0/1:10,1:10:0:0,0,0	0/1:6,0:3:3.53:7,0,4	./.	0/1:11,1:5:0.27:20,0,0	./.	./.	./.	./.	1/1:9,0:2:1.82:16,2,0	./.	1/1:25,2:16:5.97:45,6,0	0/1:5,1:4:0:0,0,0	0/1:8,0:4:0:0,0,0	0/0:11,1:7:2.66:0,3,14	./.	1/1:6,0:1:2.60:10,3,0	./.	./.
chr10	5773370	.	GTGCT	G	230.58	PASS	AB=0.943;AC=25;AF=0.481;AN=52;BaseQRankSum=0.459;DP=507;FS=9.187;HRun=0;HaplotypeScore=54.1678;InbreedingCoeff=0.2556;MQ=19.85;MQ0=96;MQRankSum=2.181;QD=1.10;ReadPosRankSum=-0.279;VQSLOD=0.2390;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:6:1.46:0,1,12	1/1:0,0:1:3:27,3,0	0/0:97,0:5:9.03:0,9,157	0/0:98,0:2:5.81:0,6,54	./.	1/1:10,2:9:2.87:63,3,0	0/1:21,0:13:1.70:2,0,58	0/0:16,0:3:5.99:0,6,73	0/0:12,0:8:7.07:0,7,56	0/1:14,1:12:76.20:154,0,76	1/1:15,2:15:0.73:2,1,0	0/1:5,1:2:0:0,0,0	0/0:7,0:4:2.88:0,3,15	1/1:9,1:6:0.97:3,1,0	0/1:5,0:2:0:0,0,0	1/1:7,0:6:4.47:11,4,0	0/1:9,0:4:9.42:40,0,9	0/1:8,0:3:0.54:18,0,1	0/0:15,0:3:3.30:0,3,72	0/0:11,1:6:1.53:0,2,16	1/1:41,1:18:2.22:7,2,0	1/1:12,1:6:1.25:4,1,0	0/1:8,1:8:0.07:0,0,0	1/1:15,0:10:2.83:14,3,0	1/1:12,2:10:3.11:9,3,0	0/0:12,0:6:5.09:0,5,24	0/0:3,0:3:5.61:0,6,53	./.
chr10	5773389	.	TGTGC	T	86.10	PASS	AB=0.925;AC=20;AF=0.385;AN=52;BaseQRankSum=2.498;DP=649;FS=10.562;HRun=0;HaplotypeScore=85.3285;InbreedingCoeff=0.1590;MQ=17.96;MQ0=105;MQRankSum=0.341;QD=0.28;ReadPosRankSum=-1.358;VQSLOD=0.6761;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:10:0.71:0,1,38	0/1:6,1:6:0.56:37,0,1	0/0:87,0:4:11.69:0,12,144	0/1:97,0:1:0:0,0,0	1/1:24,2:19:0.47:1,0,0	0/1:16,1:13:27.10:27,0,40	0/0:28,5:16:8.72:0,9,89	./.	0/0:20,0:13:0.27:0,0,97	0/1:24,1:23:34.44:34,0,386	1/1:25,2:21:0.47:2,0,0	0/0:10,1:6:2.96:0,3,19	0/0:10,2:7:5.87:0,6,40	0/0:18,1:9:2.98:0,3,21	1/1:9,0:4:2.88:15,3,0	0/0:9,0:6:3.82:0,4,49	0/0:19,0:12:16.27:0,16,181	0/1:7,3:4:8.77:9,0,46	0/0:11,0:4:5.93:0,6,67	1/1:14,5:12:0.88:2,1,0	0/0:51,0:18:2.66:0,3,26	1/1:16,3:13:1.26:3,1,0	0/0:14,1:12:2.72:0,3,14	1/1:20,0:13:2.83:15,3,0	1/1:22,0:17:5.66:30,6,0	0/0:28,0:11:20.18:0,20,276	0/1:5,0:5:35.32:35,0,59	./.
chr10	5773391	.	TGC	T	279.94	PASS	AB=0.915;AC=30;AF=0.577;AN=52;BaseQRankSum=2.066;DP=640;FS=3.191;HRun=0;HaplotypeScore=82.0454;InbreedingCoeff=0.0189;MQ=18.11;MQ0=99;MQRankSum=0.921;QD=0.65;ReadPosRankSum=-1.003;VQSLOD=1.6214;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:18,2:10:0.01:0,0,14	1/1:7,1:6:5.73:60,6,0	0/0:82,0:4:11.05:0,11,78	0/1:93,0:1:0:0,0,0	1/1:21,5:18:0.47:1,0,0	0/1:14,4:13:14.63:46,0,15	0/0:29,3:16:6.04:0,6,50	./.	0/1:15,6:13:16.01:16,0,27	0/1:23,1:22:99:123,0,128	1/1:23,3:21:0.87:2,1,0	1/1:11,1:6:2.20:7,2,0	0/0:11,1:7:4.55:0,5,30	1/1:16,1:9:0.56:1,1,0	1/1:8,1:4:2.68:11,3,0	0/1:9,0:6:5.89:6,0,24	0/1:19,1:13:4.83:5,0,10	0/1:10,0:4:8.75:9,0,21	0/0:9,0:3:5.77:0,6,31	1/1:13,5:13:0.88:2,1,0	0/0:49,4:17:1.54:0,2,4	1/1:15,6:15:2.81:14,3,0	0/0:15,0:12:1.91:0,2,6	1/1:17,3:13:2.59:11,3,0	1/1:15,6:17:3.17:39,3,0	0/1:24,3:11:31.68:32,0,69	0/1:4,1:5:23.24:23,0,28	./.
chr10	5773402	.	G	GTA	66.74	PASS	AB=0.993;AC=7;AF=0.130;AN=54;BaseQRankSum=3.015;DP=866;FS=1.106;HRun=0;HaplotypeScore=125.4579;InbreedingCoeff=0.0240;MQ=19.01;MQ0=189;MQRankSum=1.262;QD=0.43;ReadPosRankSum=2.126;VQSLOD=2.5110;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:31,0:14:15.46:15,0,25	0/0:11,0:8:9.08:0,9,76	0/0:49,0:2:4.87:0,5,17	0/0:63,0:1:2.80:0,3,13	0/0:38,0:28:0:0,0,0	0/1:28,0:19:4.14:4,0,62	0/0:48,0:24:7.86:0,8,42	./.	0/0:27,0:14:11.97:0,12,92	0/0:51,0:39:85.02:0,85,843	0/1:35,0:25:0.13:0,0,0	0/0:32,0:12:11.52:0,12,63	0/0:24,0:12:1.79:0,2,39	0/0:35,0:17:2.99:0,3,25	1/1:21,0:6:0.54:3,1,0	0/0:17,0:12:6.46:0,6,60	0/1:25,1:16:99:130,0,116	0/1:13,0:6:7.92:8,0,18	0/0:24,0:8:14.94:0,15,130	0/0:31,0:22:0.47:0,0,2	0/0:69,3:23:5.98:0,6,54	0/0:33,0:22:4.18:0,4,21	0/0:28,0:20:2.74:0,3,17	0/0:32,0:21:0.63:0,1,17	0/0:26,0:20:3.59:0,4,30	0/0:43,0:20:3.62:0,4,260	0/0:10,0:8:14.56:0,15,121	0/0:4,0:1:2.96:0,3,19
chr10	5773417	.	GGT	G	188.33	PASS	AB=0.981;AC=18;AF=0.346;AN=52;BaseQRankSum=2.946;DP=960;FS=1.855;HRun=0;HaplotypeScore=126.9616;InbreedingCoeff=-0.0788;MQ=19.12;MQ0=248;MQRankSum=-0.026;QD=0.36;ReadPosRankSum=0.593;VQSLOD=2.0255;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:18:15.02:0,15,158	0/1:11,0:10:21.56:48,0,22	./.	0/1:35,0:1:0:0,0,0	1/1:36,8:32:0.47:1,0,0	0/1:26,0:18:6.26:6,0,144	0/0:45,0:22:7.41:0,7,52	./.	0/0:28,0:16:7.09:0,7,128	0/1:48,3:38:99:100,0,351	1/1:38,4:34:0.45:1,0,0	1/1:37,1:15:2.13:29,2,0	0/1:21,0:10:33.81:34,0,51	0/1:42,0:21:11.83:12,0,55	0/1:27,0:7:20.77:21,0,103	0/0:21,0:15:25.48:0,25,289	0/0:27,0:16:19.36:0,19,200	0/1:17,0:7:5.17:5,0,62	0/0:29,0:9:12.02:0,12,131	0/1:37,5:33:2.91:30,0,3	0/0:76,1:24:6.02:0,6,99	0/0:36,2:25:5.86:0,6,69	0/0:33,4:28:3.01:0,3,30	0/1:42,0:25:1.95:2,0,68	0/0:29,1:20:4.39:0,4,47	0/1:48,0:20:21.22:21,0,216	0/0:15,0:10:4.95:0,5,89	0/1:6,0:2:2.59:6,0,3
chr10	5773429	.	TGTG	T	633.31	PASS	AB=0.983;AC=22;AF=0.423;AN=52;BaseQRankSum=4.018;DP=985;FS=4.883;HRun=0;HaplotypeScore=137.7419;InbreedingCoeff=-0.3135;MQ=19.38;MQ0=258;MQRankSum=1.261;QD=0.90;ReadPosRankSum=2.109;VQSLOD=2.4462;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:36,0:18:26.10:26,0,36	0/1:17,0:13:24.92:25,0,44	0/0:24,0:1:0:0,0,0	./.	0/1:42,2:30:0:0,0,0	0/1:30,0:19:24.94:25,0,114	0/1:51,0:25:22.10:22,0,92	./.	0/1:29,2:17:76.45:76,0,117	0/1:54,3:38:99:104,0,680	1/1:44,2:35:0.16:1,0,0	0/1:41,0:14:13:14,0,13	0/1:27,0:12:39.25:39,0,117	0/1:48,1:22:31.78:32,0,60	0/1:29,0:9:9.17:9,0,143	0/0:27,0:18:25.20:0,25,374	0/1:28,0:15:15.67:16,0,160	0/0:15,1:6:2.70:0,3,70	0/0:33,0:10:12.03:0,12,146	0/0:47,0:36:5.47:0,5,26	0/1:77,0:23:3.55:4,0,126	0/0:43,1:30:9.03:0,9,55	1/1:34,2:26:1.64:33,2,0	0/1:39,1:23:1.92:2,0,63	0/0:39,0:29:8.51:0,9,83	0/1:39,1:17:99:159,0,322	0/1:16,1:11:81.04:114,0,81	1/1:7,0:2:5.99:70,6,0
chr10	5773443	.	GGT	G	117.47	PASS	AB=0.978;AC=14;AF=0.269;AN=52;BaseQRankSum=1.839;DP=804;FS=21.386;HRun=0;HaplotypeScore=113.7942;InbreedingCoeff=0.0930;MQ=20.96;MQ0=220;MQRankSum=1.205;QD=0.36;ReadPosRankSum=1.733;VQSLOD=0.6537;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:13,0:4:0:0,0,0	0/0:15,1:12:8.28:0,8,43	./.	0/0:45,0:6:8.96:0,9,84	1/1:36,0:24:0.47:1,0,0	0/1:23,0:15:3.67:42,0,4	0/1:37,0:17:24.77:25,0,48	./.	0/0:28,0:15:11.94:0,12,125	0/0:38,1:25:30.06:0,30,260	0/0:33,1:26:2.32:0,2,6	0/1:34,2:11:12.75:53,0,13	0/1:18,2:10:22.81:30,0,23	1/1:35,2:16:4.16:67,4,0	0/1:22,0:8:2.07:2,0,171	0/0:24,0:16:13.47:0,13,179	0/0:19,0:8:3.75:0,4,10	0/1:7,0:4:6.27:6,0,39	0/0:25,0:8:6.02:0,6,71	0/0:36,0:30:6.02:0,6,67	0/1:60,1:19:9.15:9,0,44	1/1:32,0:22:1.23:3,1,0	0/0:29,1:22:2.13:0,2,5	0/0:33,0:21:2.74:0,3,50	0/0:29,0:23:1.25:0,1,3	0/0:31,0:15:22.32:0,22,188	0/0:15,0:11:11.58:0,12,94	0/0:6,0:2:6:0,6,52
chr10	5773461	.	GTC	G	118.75	PASS	AB=0.995;AC=27;AF=0.519;AN=52;BaseQRankSum=2.808;DP=399;FS=6.165;HRun=0;HaplotypeScore=69.5653;InbreedingCoeff=0.1974;MQ=38.76;MQ0=54;MQRankSum=-0.763;QD=0.49;ReadPosRankSum=1.756;VQSLOD=0.5707;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:4,0:2:0:0,0,0	0/0:5,0:3:2.09:0,2,8	0/1:57,0:8:7.14:7,0,58	0/0:64,0:9:10.34:0,10,101	1/1:14,1:10:0.47:1,0,0	0/0:12,0:9:0.45:0,0,21	1/1:14,2:11:5.66:35,6,0	./.	0/0:11,0:6:2.91:0,3,17	0/1:8,0:5:9.95:10,0,30	./.	1/1:12,0:6:1.97:20,2,0	0/1:7,0:6:8.41:18,0,8	1/1:16,0:8:3.48:32,3,0	0/0:11,0:6:11.78:0,12,81	0/0:10,1:8:0.24:0,0,23	1/1:7,1:3:8.55:44,9,0	0/1:4,0:3:5.15:5,0,6	0/0:12,0:7:11.85:0,12,87	1/1:12,0:13:1.55:4,2,0	0/1:21,1:13:6.68:7,0,23	0/1:12,0:9:0:0,0,0	0/1:16,0:12:0.02:1,0,0	0/0:11,1:10:2.80:0,3,34	0/1:13,0:9:0:1,0,0	1/1:7,1:6:1.98:19,2,0	1/1:6,0:5:1.87:32,2,0	1/1:4,0:2:2.68:11,3,0
chr10	5773462	.	TCTGTG	T	531.80	PASS	AB=0.941;AC=30;AF=0.577;AN=52;BaseQRankSum=3.670;DP=357;FS=7.992;HRun=0;HaplotypeScore=64.6299;InbreedingCoeff=0.2580;MQ=42.55;MQ0=39;MQRankSum=-1.099;QD=3.30;ReadPosRankSum=0.234;VQSLOD=0.2379;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:3,1:2:0:0,0,0	1/1:4,0:2:3.01:35,3,0	0/0:57,0:8:11.58:0,12,240	0/0:66,0:10:1.06:0,1,111	1/1:12,2:9:0.89:2,1,0	0/1:9,0:7:17.21:28,0,17	1/1:12,2:10:6.69:84,7,0	./.	0/0:7,0:3:0.89:0,1,2	0/1:6,0:4:37.81:38,0,50	1/1:9,2:8:0.89:2,1,0	0/1:9,2:6:7.13:52,0,7	0/1:8,0:6:31.26:95,0,31	1/1:13,0:7:6.72:32,7,0	0/0:8,0:6:5.35:0,5,72	1/1:11,0:8:3.27:27,3,0	1/1:6,1:3:7.73:67,8,0	1/1:4,0:3:6.01:60,6,0	0/0:11,1:7:12.03:0,12,159	1/1:11,0:11:2.92:17,3,0	0/0:21,0:12:6.02:0,6,103	./.	1/1:13,0:10:0.47:2,0,0	0/0:12,0:9:1.55:0,2,22	0/1:9,0:6:0:0,0,0	1/1:6,0:4:5.95:42,6,0	1/1:5,1:5:8.20:90,8,0	0/0:3,0:2:2.87:0,3,15
chr10	5773471	.	TGTGCG	T	590.20	PASS	AB=0.984;AC=28;AF=0.636;AN=44;BaseQRankSum=0.519;DP=268;FS=1.295;HRun=0;HaplotypeScore=54.7997;InbreedingCoeff=0.1009;MQ=50.26;MQ0=22;MQRankSum=1.271;QD=2.69;ReadPosRankSum=0.336;VQSLOD=1.3628;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:3:0:0,0,0	1/1:3,0:2:2.88:15,3,0	0/1:47,0:9:2.38:2,0,240	0/1:59,0:12:1.47:1,0,42	./.	1/1:6,0:5:2.03:18,2,0	1/1:9,0:6:3.46:25,3,0	./.	./.	0/1:5,0:3:0.89:1,0,15	0/1:7,1:5:0:0,0,0	0/1:8,0:5:17.83:59,0,18	0/1:6,0:5:28.15:56,0,28	1/1:9,2:8:9.02:130,9,0	0/1:5,0:3:8.86:9,0,9	1/1:10,0:7:8.42:106,8,0	1/1:2,1:3:6.48:89,6,0	1/1:3,0:2:5.98:66,6,0	0/1:10,0:7:9.45:9,0,10	1/1:6,0:6:0.39:1,0,0	0/0:12,0:8:3.01:0,3,60	./.	0/0:4,2:5:0:0,0,0	1/1:11,0:8:1.95:16,2,0	./.	./.	1/1:4,1:5:8.61:102,9,0	0/0:2,0:1:3.01:0,3,34
chr10	5773473	.	TGCG	T	777.89	PASS	AB=0.903;AC=25;AF=0.595;AN=42;BaseQRankSum=1.820;DP=243;FS=10.267;HRun=0;HaplotypeScore=50.4718;InbreedingCoeff=0.3113;MQ=52.67;MQ0=17;MQRankSum=0.105;QD=6.17;ReadPosRankSum=0.391;VQSLOD=0.4243;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:3:0:0,0,0	./.	0/1:43,1:10:35.56:36,0,234	0/0:55,2:13:3.40:0,3,75	./.	1/1:4,1:4:6.08:52,6,0	0/0:4,1:5:1.50:0,1,6	./.	./.	0/0:4,0:3:0.25:0,0,16	0/1:6,0:5:0:0,0,0	1/1:6,1:5:6.03:79,6,0	0/1:5,1:5:5.08:95,0,5	1/1:6,4:8:11.52:122,12,0	1/1:2,1:3:9.02:99,9,0	1/1:4,4:7:8.21:97,8,0	1/1:3,0:3:5.84:50,6,0	1/1:2,1:2:6.02:84,6,0	1/1:7,1:7:8.59:79,9,0	1/1:2,2:4:3:28,3,0	0/0:10,0:8:3.01:0,3,46	./.	0/0:5,1:5:0:0,0,0	1/1:10,1:8:3.77:19,4,0	./.	./.	1/1:4,1:5:8.53:57,9,0	0/0:2,0:1:3.01:0,3,31
chr10	5773474	.	GC	G	353.56	PASS	AB=0.938;AC=23;AF=0.548;AN=42;BaseQRankSum=1.022;DP=213;FS=7.748;HRun=1;HaplotypeScore=50.3808;InbreedingCoeff=0.3464;MQ=55.81;MQ0=14;MQRankSum=-0.420;QD=4.71;ReadPosRankSum=0.914;VQSLOD=0.2447;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:42,0:10:14.02:0,14,249	0/0:55,0:12:2.17:0,2,76	./.	1/1:3,0:3:2.03:5,2,0	0/0:6,0:5:2.96:0,3,22	./.	./.	0/0:3,0:2:1.27:0,1,25	0/1:4,0:3:0:0,0,0	0/1:6,1:4:7.81:34,0,8	0/1:5,0:4:0.41:53,0,0	1/1:9,0:7:10.55:66,11,0	1/1:1,2:3:9.01:96,9,0	1/1:6,1:7:5.98:55,6,0	1/1:3,0:3:1.91:7,2,0	1/1:3,0:2:4.41:14,4,0	1/1:4,2:5:9.02:104,9,0	1/1:3,0:3:3.01:31,3,0	0/0:9,0:7:3:0,3,26	./.	0/1:5,0:5:0:0,0,0	0/1:9,0:7:0.01:0,0,0	0/1:2,0:2:0:0,0,0	./.	0/1:4,0:4:0.44:4,0,0	0/0:2,0:1:2.99:0,3,24
chr10	5773493	.	TGC	T	194.38	PASS	AB=1.000;AC=26;AF=0.765;AN=34;BaseQRankSum=3.135;DP=210;FS=13.968;HRun=0;HaplotypeScore=44.4677;InbreedingCoeff=0.3523;MQ=55.54;MQ0=16;MQRankSum=2.013;QD=1.69;ReadPosRankSum=-1.086;VQSLOD=-0.0151;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:3:0.89:2,1,0	./.	0/0:51,1:13:19.19:0,19,319	0/1:54,0:14:4.27:4,0,190	./.	1/1:2,1:2:0.47:1,0,0	./.	1/1:5,3:4:3.17:32,3,0	./.	./.	./.	1/1:6,0:5:6.76:38,7,0	0/0:4,1:4:1.54:0,2,8	1/1:9,0:8:5.81:34,6,0	1/1:1,2:3:8.91:75,9,0	1/1:1,2:3:2.90:16,3,0	1/1:4,0:3:6.95:27,7,0	1/1:1,0:1:2.90:16,3,0	./.	0/1:4,0:4:0:0,0,0	./.	0/0:2,0:1:1.25:0,1,3	./.	1/1:8,1:6:1.25:3,1,0	./.	./.	1/1:2,1:2:2.74:12,3,0	1/1:2,0:2:5.87:36,6,0
chr10	5773501	.	TGGC	T	254.29	PASS	AB=0.991;AC=18;AF=0.500;AN=36;BaseQRankSum=1.358;DP=196;FS=0.000;HRun=0;HaplotypeScore=37.1538;InbreedingCoeff=0.2786;MQ=40.08;MQ0=22;MQRankSum=1.409;QD=2.59;ReadPosRankSum=-1.768;VQSLOD=1.0640;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:3,1:3:1.25:3,1,0	./.	0/0:50,0:10:27.05:0,27,422	0/1:54,1:11:22:22,0,63	./.	0/0:2,0:1:1.55:0,2,4	1/1:6,0:4:0.47:1,0,0	1/1:3,6:4:3.90:41,4,0	./.	./.	./.	0/0:4,0:4:1.05:0,1,4	0/1:5,0:4:5.90:6,0,27	0/0:7,0:5:2.63:0,3,16	0/0:3,0:3:5.60:0,6,19	1/1:3,0:3:3.01:37,3,0	1/1:3,2:4:11.71:147,12,0	0/0:1,0:1:3:0,3,25	0/0:8,0:5:1.29:0,1,11	./.	./.	0/0:3,0:1:3:0,3,28	./.	1/1:5,1:4:1.25:3,1,0	./.	./.	1/1:1,2:2:3.01:53,3,0	1/1:0,1:1:3.01:53,3,0
chr10	5773533	.	GTC	G	135.21	PASS	AC=18;AF=0.450;AN=40;BaseQRankSum=-0.864;DP=200;FS=0.000;HRun=0;HaplotypeScore=30.3389;InbreedingCoeff=0.4097;MQ=35.66;MQ0=44;MQRankSum=-0.184;QD=4.66;ReadPosRankSum=-2.818;VQSLOD=1.3577;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,0:2:0.89:2,1,0	./.	0/0:62,0:2:3.01:0,3,32	0/0:33,0:5:5.15:0,5,33	./.	1/1:1,1:1:2.99:23,3,0	0/0:6,0:4:2.22:0,2,7	0/0:14,0:14:5.62:0,6,111	1/1:2,0:2:2.97:20,3,0	0/0:3,1:2:3:0,3,25	./.	./.	0/0:2,0:2:5.92:0,6,43	0/0:6,0:5:2.69:0,3,16	1/1:2,0:2:2.90:16,3,0	1/1:2,0:2:4.41:16,4,0	0/0:7,0:7:6.57:0,7,53	0/0:1,0:1:3:0,3,28	1/1:8,3:6:8.44:136,8,0	1/1:2,0:2:0.40:1,0,0	./.	1/1:2,0:1:2.84:14,3,0	./.	0/0:7,0:5:0:0,0,0	./.	1/1:3,0:3:3.88:27,4,0	./.	0/0:1,0:1:2.90:0,3,16
chr10	5773611	.	G	GGT	1748.12	PASS	AC=36;AF=0.692;AN=52;BaseQRankSum=-4.278;DP=210;FS=30.556;HRun=0;HaplotypeScore=46.2332;InbreedingCoeff=0.6004;MQ=49.47;MQ0=0;MQRankSum=-3.486;QD=12.76;ReadPosRankSum=0.143;VQSLOD=1.1916;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:10:2.84:0,3,14	1/1:3,0:3:6.02:77,6,0	0/0:17,0:12:35.89:0,36,278	0/0:12,0:7:17.66:0,18,194	./.	1/1:0,8:10:18.05:222,18,0	1/1:2,7:9:5.98:55,6,0	0/0:6,0:6:2.11:0,2,38	1/1:2,3:5:3.01:35,3,0	1/1:1,7:8:21.07:319,21,0	1/1:1,3:4:2.80:34,3,0	1/1:0,6:6:12.04:141,12,0	1/1:0,5:5:9.03:106,9,0	1/1:0,9:9:6.02:68,6,0	1/1:1,10:12:9.03:119,9,0	1/1:3,3:6:9.03:105,9,0	0/0:3,0:3:3:0,3,29	1/1:0,2:2:3.01:36,3,0	./.	1/1:1,9:10:6.02:70,6,0	1/1:1,6:7:3.01:35,3,0	1/1:0,9:9:9.03:118,9,0	1/1:0,8:9:9.03:119,9,0	1/1:1,10:12:9.03:119,9,0	1/1:1,9:11:12.03:137,12,0	0/0:6,0:6:7.09:0,7,51	0/0:7,0:7:11.32:0,11,78	0/0:1,0:1:2.37:0,2,8
chr10	5774412	.	CGG	C	12594.37	PASS	AB=0.803;AC=52;AF=0.929;AN=56;BaseQRankSum=1.947;DP=614;FS=2.433;HRun=13;HaplotypeScore=229.1607;InbreedingCoeff=0.4897;MQ=53.54;MQ0=1;MQRankSum=-4.446;QD=21.06;ReadPosRankSum=3.987;VQSLOD=1.9310;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:17,3:37:4.92:96,0,5	1/1:3,10:13:26.86:262,27,0	0/0:16,0:12:18.24:0,18,185	0/1:16,0:14:24.90:25,0,62	1/1:5,19:24:44.87:428,45,0	1/1:3,16:19:45:436,45,0	1/1:2,14:16:42.06:407,42,0	1/1:9,22:31:65.41:639,65,0	1/1:1,28:29:81.13:785,81,0	1/1:3,19:22:57.08:552,57,0	1/1:6,14:20:38.96:378,39,0	1/1:4,25:29:75.06:727,75,0	1/1:4,17:21:53.92:515,54,0	1/1:2,21:23:63.08:611,63,0	1/1:5,25:30:71.93:688,72,0	1/1:2,21:23:63.01:611,63,0	1/1:3,24:27:63.08:611,63,0	1/1:7,9:16:26.86:262,27,0	1/1:3,8:11:23.81:232,24,0	1/1:5,18:23:54.08:523,54,0	1/1:4,8:12:18:174,18,0	1/1:4,12:16:35.97:349,36,0	1/1:2,27:29:78.13:756,78,0	1/1:7,10:17:29.82:290,30,0	1/1:3,18:21:48.07:465,48,0	1/1:4,26:30:77.93:755,78,0	1/1:4,27:31:77.96:755,78,0	1/1:2,9:11:27:261,27,0
chr10	5775005	.	TCA	T	26384.42	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=4.445;DP=693;FS=2.579;HRun=0;HaplotypeScore=116.1963;InbreedingCoeff=0.9971;MQ=90.06;MQ0=2;MQRankSum=-11.633;QD=41.10;ReadPosRankSum=6.481;VQSLOD=6.1713;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,23:23:57.19:865,57,0	1/1:0,10:10:30.10:459,30,0	0/0:30,0:30:87.26:0,87,1592	0/0:21,0:21:60.19:0,60,1112	1/1:0,35:35:96.33:1455,96,0	1/1:0,35:35:96.33:1469,96,0	1/1:0,21:21:57.19:873,57,0	1/1:1,41:42:99:1775,120,0	1/1:0,20:20:57.19:872,57,0	1/1:0,36:36:99:1605,105,0	1/1:0,29:29:81.23:1205,81,0	1/1:0,22:22:57.19:872,57,0	1/1:0,20:20:57.19:868,57,0	1/1:0,22:22:57.19:872,57,0	1/1:1,37:38:99:1561,102,0	1/1:0,24:24:69.23:1056,69,0	1/1:0,15:15:42.14:642,42,0	1/1:0,13:13:27.09:414,27,0	1/1:1,23:24:69.22:1022,69,0	1/1:1,33:34:87.24:1298,87,0	1/1:0,17:17:51.17:781,51,0	1/1:0,22:22:63.21:955,63,0	1/1:0,22:21:54.16:827,54,0	1/1:1,11:12:24.08:367,24,0	1/1:1,33:34:90.31:1378,90,0	1/1:1,30:31:90.31:1377,90,0	1/1:2,31:32:75.25:1148,75,0	1/1:0,8:8:24.08:367,24,0
chr10	5775851	.	G	GCA	8176.18	PASS	AB=0.723;AC=43;AF=0.768;AN=56;BaseQRankSum=0.999;DP=669;FS=0.000;HRun=0;HaplotypeScore=117.8863;InbreedingCoeff=0.1643;MQ=66.30;MQ0=16;MQRankSum=-1.149;QD=14.71;ReadPosRankSum=-0.020;VQSLOD=4.7125;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:24:2.84:43,3,0	1/1:3,1:7:12.02:142,12,0	0/0:38,0:15:0.47:0,0,1	0/0:47,0:20:5.19:0,5,62	1/1:16,4:24:43.87:493,44,0	0/1:7,10:17:40.48:293,0,40	0/1:11,11:23:99:330,0,99	1/1:25,0:23:14.42:132,14,0	0/1:10,11:21:99:408,0,123	1/1:22,1:32:17.26:468,17,0	0/1:25,2:34:21.67:351,0,22	1/1:19,2:26:53.56:562,54,0	1/1:18,1:23:40.30:409,40,0	1/1:17,3:24:33.06:398,33,0	0/0:25,0:28:47.80:0,48,501	1/1:14,17:32:16.41:659,16,0	1/1:15,0:16:12.89:118,13,0	1/1:12,1:14:6.81:104,7,0	1/1:10,4:14:12.01:158,12,0	1/1:6,12:20:13.05:438,13,0	1/1:12,3:15:19.82:197,20,0	0/1:11,11:24:3.69:382,0,4	0/1:20,2:24:12.02:281,0,12	1/1:18,2:22:27.04:312,27,0	0/1:19,7:26:59.99:420,0,60	1/1:24,2:30:57.59:598,58,0	1/1:14,0:18:20.07:231,20,0	1/1:6,0:13:29.91:249,30,0
chr10	5775899	.	TGATA	T	1437.40	PASS	AC=6;AF=0.111;AN=54;BaseQRankSum=-0.512;DP=713;FS=2.330;HRun=0;HaplotypeScore=186.4945;InbreedingCoeff=0.7778;MQ=59.95;MQ0=10;MQRankSum=1.059;QD=19.17;ReadPosRankSum=0.631;VQSLOD=3.5474;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:21.07:0,21,491	0/0:5,0:10:18.01:0,18,198	./.	0/0:33,0:23:0.94:0,1,1	0/0:20,0:27:8.76:0,9,136	0/0:16,0:25:39.13:0,39,684	0/0:16,0:21:24.07:0,24,391	0/0:26,0:26:13.25:0,13,156	0/0:21,0:21:21.07:0,21,489	0/0:32,0:41:63.21:0,63,1104	0/0:27,0:29:12.02:0,12,183	0/0:17,0:30:21.03:0,21,248	0/0:16,0:30:14.63:0,15,243	0/0:15,0:27:11.65:0,12,81	0/0:29,0:29:42.13:0,42,924	0/0:20,0:29:42.06:0,42,688	0/0:18,0:18:24.08:0,24,557	0/0:8,0:14:17.56:0,18,199	0/0:21,0:18:18.06:0,18,420	0/0:32,0:32:66.23:0,66,1540	0/0:15,0:18:3.01:0,3,49	0/0:15,0:25:42.14:0,42,732	0/0:14,0:18:6.91:0,7,110	0/0:12,0:18:3.28:0,3,52	0/0:19,0:37:57.16:0,57,933	1/1:20,15:35:35.82:654,36,0	1/1:9,16:25:36.12:554,36,0	1/1:7,8:15:24.08:369,24,0
chr10	5776734	.	T	TACACAC	3936.05	PASS	AB=0.917;AC=28;AF=0.538;AN=52;BaseQRankSum=0.383;DP=700;FS=2.819;HRun=0;HaplotypeScore=178.2091;InbreedingCoeff=0.5716;MQ=70.31;MQ0=18;MQRankSum=-3.947;QD=9.99;ReadPosRankSum=-3.169;VQSLOD=2.0082;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:25:11.96:164,12,0	0/1:14,0:14:10.02:10,0,144	./.	./.	0/0:11,0:14:21.03:0,21,335	0/0:17,10:28:0.88:0,1,2	1/1:22,3:23:18.04:415,18,0	1/1:29,0:28:25.50:286,26,0	1/1:13,0:26:11.14:188,11,0	0/1:32,0:32:35.75:36,0,316	0/0:15,0:15:5.89:0,6,85	0/0:17,0:22:17.82:0,18,326	0/0:17,0:17:21:0,21,349	0/0:11,0:10:15.05:0,15,289	1/1:5,7:20:18.06:316,18,0	1/1:10,13:23:12.04:370,12,0	1/1:9,1:16:15.05:363,15,0	0/0:19,0:20:17.55:0,18,216	1/1:15,0:13:15.05:270,15,0	0/1:20,0:40:17.08:71,0,17	0/0:31,0:33:5.70:0,6,372	0/0:17,0:30:7.77:0,8,70	0/0:30,0:28:19.86:0,20,253	0/1:20,0:25:13.66:14,0,355	1/1:14,13:33:12.04:361,12,0	1/1:17,0:30:41.28:537,41,0	1/1:13,1:31:35.81:495,36,0	1/1:4,0:4:3.01:40,3,0
chr10	5778530	.	GTACA	G	2745.75	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=11.232;DP=915;FS=5.965;HRun=0;HaplotypeScore=192.4259;InbreedingCoeff=0.9964;MQ=57.43;MQ0=25;MQRankSum=-11.343;QD=43.58;ReadPosRankSum=-0.235;VQSLOD=3.3613;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,137,3383	0/0:14,0:14:42.13:0,42,1013	0/0:73,0:14:29.86:0,30,444	0/0:72,0:19:50.93:0,51,908	0/0:30,0:30:87.18:0,87,1947	0/0:28,0:28:54.15:0,54,1094	0/0:40,0:40:96.15:0,96,1653	1/1:2,16:16:38.27:577,38,0	0/0:22,0:22:51.01:0,51,971	0/0:45,0:45:99:0,135,3170	0/0:29,0:29:87.21:0,87,2000	0/0:40,0:40:99:0,117,2569	0/0:30,0:30:87.18:0,87,1703	0/0:35,0:35:99:0,105,2451	0/0:39,0:39:96.25:0,96,1797	0/0:33,0:33:84.18:0,84,1513	0/0:33,0:33:99:0,99,2280	0/0:26,0:26:78.21:0,78,1743	0/0:18,0:18:51.09:0,51,768	0/0:29,0:29:66.18:0,66,1316	0/0:55,0:55:99:0,160,3315	0/0:33,0:32:74.76:0,75,1427	0/0:17,0:17:51.04:0,51,1236	0/0:37,0:37:99:0,105,2444	0/0:26,0:26:57.13:0,57,1037	1/1:1,27:29:59.29:1555,59,0	1/1:0,9:9:18.06:355,18,0	1/1:0,7:7:21.07:418,21,0
chr10	5778531	.	T	TAC	5982.14	PASS	AB=0.637;AC=13;AF=0.232;AN=56;BaseQRankSum=-15.537;DP=917;FS=7.768;HRun=0;HaplotypeScore=150.7874;InbreedingCoeff=0.4639;MQ=57.43;MQ0=25;MQRankSum=3.036;QD=22.41;ReadPosRankSum=1.105;VQSLOD=5.4470;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:48:99:0,117,1314	0/0:14,0:14:39.12:0,39,462	0/0:72,0:14:2.76:0,3,85	0/0:71,0:18:39.39:0,39,311	0/0:30,0:31:72.01:0,72,816	1/1:4,24:28:9.60:630,10,0	0/1:15,25:40:46.19:747,0,46	0/0:18,0:16:5.26:0,5,83	1/1:2,20:22:45.15:700,45,0	0/0:46,0:46:99:0,117,1355	0/0:28,0:29:75.06:0,75,865	0/0:40,0:41:93.14:0,93,1070	0/0:29,0:29:53.83:0,54,632	0/0:35,0:35:87.26:0,87,1029	1/1:13,27:40:30.67:963,31,0	0/1:8,24:32:10.32:796,0,10	0/0:29,0:32:83.72:0,84,912	0/0:26,0:26:59.56:0,60,708	0/1:12,4:17:96.39:166,0,96	0/1:10,19:30:81.47:523,0,81	0/0:55,0:55:99:0,111,1312	0/1:10,22:32:10.59:791,0,11	0/0:19,0:19:45.12:0,45,520	0/0:36,1:37:39.71:0,40,947	1/1:4,20:25:42.14:666,42,0	0/0:29,0:29:73.93:0,74,365	0/0:9,0:9:17.11:0,17,86	0/0:7,0:7:19.95:0,20,100
chr10	5778709	.	AC	A	3904.07	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=13.835;DP=779;FS=20.582;HRun=1;HaplotypeScore=83.0797;InbreedingCoeff=0.9998;MQ=89.04;MQ0=0;MQRankSum=-1.262;QD=39.04;ReadPosRankSum=0.570;VQSLOD=1.7434;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:46:99:0,135,2130	0/0:10,0:10:30.10:0,30,475	0/0:24,0:24:72.04:0,72,1035	0/0:32,1:33:80.05:0,80,1335	0/0:28,0:28:84.25:0,84,1292	0/0:27,0:27:81.25:0,81,1243	0/0:18,0:18:54.18:0,54,863	1/1:0,31:31:93.29:1268,93,0	0/0:29,0:29:87.28:0,87,1363	0/0:40,0:40:99:0,117,1811	0/0:30,0:30:87.25:0,87,1316	0/0:34,0:34:99:0,102,1603	0/0:34,0:34:99:0,102,1623	0/0:25,0:25:75.24:0,75,1175	0/0:32,0:32:96.21:0,96,1448	0/0:27,0:27:81.26:0,81,1268	0/0:26,0:26:78.22:0,78,1191	0/0:23,0:23:69.14:0,69,1046	0/0:19,0:19:57.18:0,57,869	0/0:32,0:32:96.29:0,96,1479	0/0:39,0:39:99:0,114,1717	0/0:26,0:26:78.27:0,78,1246	0/0:29,0:29:87.27:0,87,1339	0/0:26,0:26:78.27:0,78,1236	0/0:21,0:21:63.18:0,63,937	1/1:0,31:31:93.28:1264,93,0	1/1:1,20:21:57.19:786,57,0	1/1:0,17:17:42.14:587,42,0
chr10	5779143	.	AGTGTGT	A	8523.90	PASS	AB=0.788;AC=38;AF=0.704;AN=54;BaseQRankSum=8.467;DP=683;FS=0.964;HRun=0;HaplotypeScore=188.0957;InbreedingCoeff=0.6904;MQ=63.91;MQ0=4;MQRankSum=-11.925;QD=19.07;ReadPosRankSum=2.513;VQSLOD=4.4251;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:45:68.38:0,68,1852	1/1:5,2:7:6.02:124,6,0	./.	0/0:34,0:25:9.03:0,9,260	1/1:8,9:16:21.07:410,21,0	1/1:5,0:12:9.79:241,10,0	1/1:10,0:15:13:204,13,0	0/0:24,0:24:30.10:0,30,860	1/1:10,0:27:42.14:582,42,0	1/1:12,11:23:34.85:674,35,0	1/1:9,7:16:12.04:247,12,0	1/1:14,26:45:65.15:1244,65,0	1/1:13,11:25:29.95:598,30,0	1/1:12,17:32:57.19:1135,57,0	1/1:9,0:27:48.16:667,48,0	1/1:13,0:30:45.01:591,45,0	0/0:18,0:37:57.20:0,57,1492	1/1:15,7:23:1.11:331,1,0	1/1:10,0:15:9.03:126,9,0	1/1:13,0:24:3.82:310,4,0	0/1:30,8:37:53.06:53,0,72	1/1:10,0:22:5.86:337,6,0	1/1:4,5:9:12.04:247,12,0	0/1:18,8:27:58.73:151,0,59	1/1:3,0:12:18.06:251,18,0	0/0:22,0:26:35.24:0,35,878	0/0:23,0:25:54.18:0,54,1614	0/0:13,0:14:21.07:0,21,626
chr10	5781030	.	C	CTAA	29760.67	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=10.728;DP=696;FS=10.544;HRun=0;HaplotypeScore=122.7402;InbreedingCoeff=0.9990;MQ=75.71;MQ0=0;MQRankSum=-10.378;QD=53.05;ReadPosRankSum=2.578;VQSLOD=6.9900;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,147,2280	1/1:0,9:9:24.08:544,24,0	0/0:27,0:27:75.22:0,75,1181	0/0:23,0:24:58.22:0,58,1033	1/1:4,26:31:66.11:1349,66,0	1/1:0,23:23:66.19:1416,66,0	1/1:3,20:24:54.19:1220,54,0	1/1:1,29:34:99:1880,99,0	1/1:0,16:16:45.15:1017,45,0	1/1:1,26:27:78.27:1762,78,0	1/1:3,16:19:45.12:955,45,0	1/1:4,21:26:66.18:1414,66,0	1/1:3,11:15:36.07:693,36,0	1/1:2,30:32:81.28:1772,81,0	1/1:1,17:19:42.14:919,42,0	1/1:4,24:28:72.20:1541,72,0	0/0:32,0:32:93.30:0,93,1521	1/1:1,24:26:60.16:1310,60,0	1/1:1,13:15:42.13:891,42,0	1/1:5,26:32:72.23:1466,72,0	1/1:2,16:19:33.07:699,33,0	1/1:1,20:21:59.93:1173,60,0	1/1:3,23:27:68.74:1468,69,0	1/1:0,14:14:27.56:612,28,0	1/1:2,17:19:39.09:715,39,0	1/1:5,31:36:99:2182,99,0	1/1:0,27:28:78.22:1716,78,0	1/1:1,20:21:48.16:1047,48,0
chr10	5782112	.	AACC	A	9436.45	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=14.623;DP=681;FS=10.947;HRun=0;HaplotypeScore=101.6568;InbreedingCoeff=0.9996;MQ=94.67;MQ0=0;MQRankSum=-9.770;QD=43.49;ReadPosRankSum=3.742;VQSLOD=6.4342;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,99,2273	0/0:8,0:8:24.08:0,24,553	0/0:26,0:26:78.27:0,78,1740	0/0:37,0:37:99:0,102,2183	0/0:27,0:27:81.28:0,81,1836	1/1:0,27:27:69.24:1175,69,0	1/1:1,20:21:45.15:754,45,0	0/0:32,0:32:84.28:0,84,1850	1/1:1,17:18:45.15:768,45,0	0/0:25,0:25:72.25:0,72,1631	0/0:21,0:21:63.22:0,63,1433	0/0:23,0:23:69.24:0,69,1570	0/0:35,0:35:99:0,105,2376	0/0:28,0:28:81.28:0,81,1868	1/1:1,28:29:84.29:1432,84,0	1/1:1,31:32:90.31:1535,90,0	0/0:17,0:17:45.15:0,45,1037	0/0:20,0:20:57.20:0,57,1315	1/1:1,15:16:42.05:684,42,0	1/1:1,26:27:69.24:1177,69,0	0/0:22,0:22:63.22:0,63,1444	1/1:0,25:25:69.19:1144,69,0	0/0:15,0:15:42.14:0,42,945	0/0:24,0:24:72.25:0,72,1622	1/1:0,22:22:45.15:768,45,0	0/0:38,0:38:99:0,108,2414	0/0:21,0:21:63.20:0,63,1409	0/0:11,0:11:30.07:0,30,517
chr10	5782654	.	AT	A	10385.70	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=7.994;DP=534;FS=1.608;HRun=9;HaplotypeScore=56.6011;InbreedingCoeff=0.9662;MQ=69.42;MQ0=0;MQRankSum=-1.809;QD=22.63;ReadPosRankSum=0.891;VQSLOD=5.6683;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,99,1119	1/1:1,5:6:12.01:110,12,0	0/0:5,0:5:8.79:0,9,66	0/0:10,0:9:14.68:0,15,114	1/1:6,27:33:65.02:688,65,0	1/1:0,18:18:51.03:467,51,0	1/1:2,14:16:39.01:357,39,0	1/1:4,31:35:93.01:837,93,0	1/1:1,17:18:45.02:412,45,0	1/1:3,17:20:50.95:450,51,0	1/1:2,20:22:50.92:450,51,0	1/1:0,23:23:69.04:632,69,0	1/1:1,14:15:39.01:357,39,0	1/1:3,14:17:30.01:275,30,0	1/1:2,21:23:57.03:522,57,0	1/1:3,10:13:30.01:275,30,0	0/0:26,0:26:69.19:0,69,785	1/1:0,17:17:42.02:384,42,0	1/1:3,12:15:36.01:329,36,0	1/1:1,26:27:65.94:649,66,0	1/1:1,16:17:48.02:439,48,0	1/1:3,19:22:53.93:478,54,0	1/1:1,19:20:50.59:466,51,0	1/1:1,10:11:30.02:275,30,0	1/1:0,11:11:27.01:247,27,0	1/1:1,20:21:60.01:541,60,0	1/1:5,24:30:64.89:582,65,0	1/1:2,7:9:18.01:165,18,0
chr10	5783537	.	A	AACACACAC	5639.82	PASS	AB=0.933;AC=40;AF=0.769;AN=52;BaseQRankSum=-0.084;DP=539;FS=1.159;HRun=0;HaplotypeScore=172.7405;InbreedingCoeff=0.3885;MQ=60.27;MQ0=9;MQRankSum=-2.482;QD=13.27;ReadPosRankSum=0.437;VQSLOD=4.1346;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:33:38.54:93,0,39	1/1:8,0:9:6.02:194,6,0	0/0:34,0:18:14.95:0,15,193	0/0:38,0:22:14.82:0,15,227	1/1:18,0:27:1.84:47,2,0	1/1:11,13:25:12.04:409,12,0	0/1:12,7:18:0:0,0,0	1/1:29,0:24:30.06:606,30,0	1/1:19,3:23:28.63:567,29,0	1/1:14,0:14:21.03:539,21,0	0/0:7,0:8:0.69:0,1,2	1/1:14,0:18:9.03:212,9,0	1/1:10,0:14:18.06:449,18,0	1/1:12,0:14:3.01:48,3,0	1/1:24,2:26:12.04:221,12,0	1/1:16,3:19:21.54:496,22,0	0/1:29,0:29:11.96:228,0,12	1/1:4,0:5:6.02:184,6,0	1/1:11,3:14:21.05:630,21,0	1/1:16,3:19:18.03:346,18,0	0/1:18,0:16:0:0,0,0	1/1:14,10:24:5.17:58,5,0	0/0:13,0:14:0.89:0,1,2	./.	1/1:12,2:14:6.02:98,6,0	1/1:13,0:12:3.01:105,3,0	1/1:8,0:8:3.01:111,3,0	./.
chr10	5783561	.	C	CACACAGAG	7315.53	PASS	AB=0.766;AC=50;AF=0.893;AN=56;BaseQRankSum=1.282;DP=632;FS=8.398;HRun=0;HaplotypeScore=219.9269;InbreedingCoeff=0.1222;MQ=38.47;MQ0=12;MQRankSum=-1.812;QD=12.46;ReadPosRankSum=3.784;VQSLOD=2.7582;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:4,23:32:0.76:130,0,1	1/1:4,0:6:6.02:143,6,0	0/0:45,0:10:14.81:0,15,290	0/1:63,0:21:10.64:11,0,189	1/1:28,0:25:1.06:23,1,0	1/1:32,0:32:21.05:403,21,0	0/1:17,0:15:8.05:52,0,8	1/1:37,0:32:64.41:716,64,0	1/1:21,0:21:36.10:511,36,0	1/1:22,0:21:51.13:787,51,0	1/1:13,0:12:3.06:25,3,0	1/1:16,0:18:9.03:178,9,0	1/1:16,0:22:30.06:581,30,0	1/1:13,0:14:11.88:216,12,0	1/1:19,0:28:12.04:193,12,0	1/1:14,0:19:24.39:454,24,0	0/1:4,3:36:13.50:335,0,14	1/1:5,0:4:9.03:168,9,0	1/1:21,0:20:50.46:851,50,0	1/1:14,0:19:18.03:258,18,0	1/1:12,0:10:2.01:22,2,0	1/1:29,0:27:5.29:54,5,0	1/1:12,0:17:1.83:46,2,0	1/1:12,0:12:3.01:43,3,0	1/1:15,0:20:6.02:98,6,0	1/1:16,0:13:36.02:510,36,0	1/1:14,0:12:18.04:301,18,0	1/1:6,0:6:16.73:208,17,0
chr10	5785535	.	TGCACGCAC	T	710.43	PASS	AB=0.968;AC=14;AF=0.250;AN=56;BaseQRankSum=6.424;DP=553;FS=14.393;HRun=0;HaplotypeScore=143.0460;InbreedingCoeff=0.1814;MQ=55.54;MQ0=11;MQRankSum=-4.643;QD=3.42;ReadPosRankSum=-0.358;VQSLOD=1.9558;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:26:54.17:0,54,939	1/1:5,0:5:3.01:76,3,0	0/0:19,0:3:8.18:0,8,53	0/0:34,0:11:20.02:0,20,217	0/1:16,0:16:0:0,0,0	0/0:22,0:22:57.12:0,57,808	0/0:23,0:23:47.99:0,48,874	0/0:19,0:19:57.14:0,57,784	0/0:15,0:15:39.10:0,39,607	1/1:19,0:19:14.01:248,14,0	1/1:17,1:18:0.92:2,1,0	0/1:24,1:25:41.35:54,0,41	0/1:13,2:15:13:199,0,13	0/1:13,1:14:18.98:61,0,19	0/0:21,0:21:42.11:0,42,655	0/0:13,0:13:30.09:0,30,474	0/0:26,0:25:56.01:0,56,756	0/1:16,0:14:25.26:36,0,25	0/0:8,0:8:24.08:0,24,398	0/0:16,0:15:36.04:0,36,542	0/0:35,0:33:5.99:0,6,50	0/0:16,0:16:32.54:0,33,426	0/1:25,0:25:17.67:18,0,19	0/0:19,1:20:2.77:0,3,25	0/0:24,0:24:66.19:0,66,1084	0/1:26,0:25:1.29:1,0,791	0/1:28,0:28:99:158,0,600	0/0:6,0:5:15.01:0,15,186
chr10	5785536	.	GCACGCACA	G	1491.55	PASS	AB=0.805;AC=21;AF=0.375;AN=56;BaseQRankSum=4.756;DP=549;FS=1.220;HRun=0;HaplotypeScore=140.6164;InbreedingCoeff=0.5730;MQ=55.14;MQ0=11;MQRankSum=0.482;QD=5.76;ReadPosRankSum=-0.280;VQSLOD=2.6963;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:28:53.29:0,53,583	1/1:0,5:5:3.01:78,3,0	0/0:19,0:3:2.94:0,3,19	0/0:31,0:9:6.93:0,7,49	0/1:0,16:16:0:0,0,0	0/0:22,0:22:53.43:0,53,417	0/0:24,0:24:47.46:0,47,484	0/0:19,0:19:48.02:0,48,358	0/0:13,0:13:32.82:0,33,298	1/1:0,19:19:56.93:636,57,0	1/1:1,16:18:0.92:2,1,0	1/1:2,22:24:2.63:47,3,0	1/1:3,12:15:8.91:214,9,0	1/1:3,11:14:3.01:84,3,0	0/0:22,0:22:35.86:0,36,309	0/0:13,0:13:26.75:0,27,233	0/0:28,0:27:54.41:0,54,512	1/1:16,0:14:33.99:297,34,0	0/0:8,0:8:23.59:0,24,187	0/0:16,0:15:29.60:0,30,249	0/1:34,0:32:0:0,0,0	0/0:16,0:16:22.31:0,22,182	1/1:1,23:24:3.47:29,3,0	0/1:2,18:20:0.11:0,0,0	0/0:23,0:23:59.65:0,60,584	0/1:26,0:25:19.62:20,0,283	0/1:28,0:27:99:249,0,189	0/0:6,0:5:9.26:0,9,69
chr10	5785538	.	ACG	A	639.97	PASS	AB=1.000;AC=15;AF=0.278;AN=54;BaseQRankSum=5.093;DP=542;FS=0.613;HRun=0;HaplotypeScore=107.0380;InbreedingCoeff=0.6369;MQ=54.99;MQ0=13;MQRankSum=-0.487;QD=3.72;ReadPosRankSum=-0.245;VQSLOD=2.4663;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:30:16.59:0,17,335	1/1:5,0:5:2.94:18,3,0	0/0:18,0:2:2.94:0,3,19	0/0:31,0:9:6.93:0,7,49	0/1:16,0:16:0.06:0,0,0	0/0:22,0:22:50.22:0,50,355	0/0:24,0:24:47.46:0,47,351	0/0:18,0:18:41.27:0,41,349	0/0:13,0:13:23.79:0,24,191	1/1:19,0:19:53.90:449,54,0	0/1:18,0:18:0:1,0,0	0/0:24,0:24:2.37:0,2,8	1/1:15,0:15:3.90:37,4,0	1/1:14,0:14:2.93:24,3,0	0/0:21,0:21:34.85:0,35,252	0/0:12,0:12:25.78:0,26,172	0/0:28,0:26:46.62:0,47,321	1/1:15,0:13:33.01:250,33,0	0/0:8,0:8:16.78:0,17,124	0/0:14,0:13:27.48:0,27,210	./.	0/0:16,0:16:22.52:0,23,158	0/1:24,0:24:0:0,0,0	0/1:20,0:20:0.02:0,0,0	0/0:22,0:22:54.52:0,55,408	0/0:26,0:25:37.98:0,38,355	0/1:26,0:25:2.67:3,0,201	0/0:6,0:5:14.70:0,15,93
chr10	5785585	.	CACACACACACAT	C	1911.27	PASS	AB=0.996;AC=14;AF=0.250;AN=56;BaseQRankSum=0.488;DP=558;FS=17.349;HRun=0;HaplotypeScore=169.6821;InbreedingCoeff=0.0857;MQ=57.64;MQ0=19;MQRankSum=-0.832;QD=8.46;ReadPosRankSum=-0.577;VQSLOD=1.7549;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:23:29.10:0,29,589	0/0:2,0:2:5.99:0,6,48	0/0:14,0:12:29.06:0,29,294	0/0:22,0:16:46.18:0,46,476	0/0:13,0:13:20.52:0,21,241	0/1:26,0:25:99:198,0,126	0/1:30,0:28:2.54:3,0,234	1/1:20,0:20:21.94:346,22,0	0/1:18,0:17:99:165,0,109	0/0:30,0:30:68.07:0,68,880	0/0:22,0:21:28.56:0,29,411	0/0:28,0:28:27.47:0,27,281	0/0:20,0:20:38.86:0,39,537	0/0:12,0:12:2.15:0,2,215	0/1:26,1:27:8.09:8,0,78	0/1:15,0:15:67.44:138,0,67	0/0:27,0:26:53.51:0,54,835	0/0:20,0:18:31.04:0,31,665	0/1:8,0:7:72.84:84,0,73	0/1:15,0:14:11.35:11,0,47	0/0:33,0:31:44.67:0,45,464	0/0:20,0:20:2.87:0,3,47	0/0:24,0:23:11.62:0,12,200	0/0:20,0:19:14.85:0,15,262	0/1:17,0:17:99:132,0,281	0/1:22,0:21:23.69:343,0,24	1/1:13,3:15:23.73:557,24,0	0/1:12,0:10:0.60:86,0,1
chr10	5785587	.	CACACACACAT	C	2313.09	PASS	AB=0.989;AC=18;AF=0.321;AN=56;BaseQRankSum=2.203;DP=557;FS=17.827;HRun=0;HaplotypeScore=154.0917;InbreedingCoeff=0.1731;MQ=62.38;MQ0=18;MQRankSum=-1.968;QD=9.93;ReadPosRankSum=0.863;VQSLOD=1.7713;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:23:32.61:0,33,498	0/1:2,0:2:0.86:1,0,20	0/0:16,0:14:35:0,35,341	0/0:25,0:19:55.08:0,55,540	0/0:13,0:13:20.84:0,21,216	0/1:26,0:25:23.37:269,0,23	0/1:27,0:25:2.41:2,0,159	1/1:20,0:20:22:346,22,0	0/1:16,0:16:48.72:227,0,49	0/0:31,0:31:4.97:0,5,660	0/0:22,0:21:28.35:0,28,367	0/0:28,0:28:27.44:0,27,225	0/0:20,0:20:21.37:0,21,397	0/1:15,0:15:12.83:13,0,228	0/1:27,0:27:24:24,0,32	0/1:15,0:15:24.82:205,0,25	0/0:26,0:25:57.18:0,57,693	0/0:20,0:18:2.15:0,2,455	0/1:8,0:7:27.67:86,0,28	0/1:14,0:13:11.17:11,0,21	0/0:33,0:31:44.60:0,45,402	0/0:20,0:20:2.86:0,3,24	0/0:24,0:23:11.47:0,11,168	0/0:21,0:20:17.85:0,18,216	0/1:16,0:17:99:139,0,144	1/1:4,15:19:44.60:410,45,0	1/1:6,9:14:23.73:597,24,0	1/1:11,0:9:16.34:157,16,0
chr10	5785591	.	CACACAT	C	2442.20	PASS	AB=0.987;AC=25;AF=0.446;AN=56;BaseQRankSum=2.759;DP=542;FS=24.539;HRun=0;HaplotypeScore=127.2502;InbreedingCoeff=0.7927;MQ=65.02;MQ0=14;MQRankSum=-2.072;QD=10.90;ReadPosRankSum=1.035;VQSLOD=1.2859;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:22:29.72:0,30,326	0/1:2,0:2:11.08:11,0,19	0/0:17,0:15:37.99:0,38,365	0/0:26,0:20:57.71:0,58,563	0/0:13,0:13:20.97:0,21,193	1/1:25,0:24:43.81:401,44,0	0/1:24,0:23:5.17:5,0,35	1/1:23,0:23:31.10:424,31,0	1/1:18,0:17:43.58:332,44,0	0/0:33,0:33:19.84:0,20,596	0/0:23,0:22:31.90:0,32,321	0/0:30,0:30:33.28:0,33,265	0/0:21,0:21:6.60:0,7,279	0/0:14,0:14:7.80:0,8,193	1/1:24,2:26:8.39:62,8,0	1/1:13,2:15:21.24:239,21,0	0/0:25,0:24:53.77:0,54,482	0/0:20,0:19:35.10:0,35,397	1/1:7,0:6:14.04:118,14,0	1/1:14,0:13:5.86:39,6,0	0/0:31,0:30:44.67:0,45,348	0/1:20,0:20:0.13:0,0,0	0/0:21,0:21:11.90:0,12,115	0/0:20,0:19:23.79:0,24,215	1/1:12,0:12:21.80:186,22,0	1/1:15,0:15:41.56:346,42,0	1/1:14,0:14:23.73:378,24,0	1/1:8,0:7:14.06:110,14,0
chr10	5785593	.	CACAT	C	2628.78	PASS	AB=1.000;AC=25;AF=0.446;AN=56;BaseQRankSum=3.136;DP=540;FS=20.880;HRun=0;HaplotypeScore=113.8319;InbreedingCoeff=0.8760;MQ=66.87;MQ0=13;MQRankSum=-2.339;QD=12.89;ReadPosRankSum=0.482;VQSLOD=1.7483;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:22:29.97:0,30,285	0/1:2,0:2:1.34:1,0,20	0/0:18,0:16:40.98:0,41,388	0/0:27,0:21:60.28:0,60,584	0/0:13,0:13:20.96:0,21,170	1/1:23,0:22:53.85:435,54,0	1/1:8,17:23:2.62:14,3,0	1/1:25,0:25:37.13:476,37,0	1/1:18,0:17:44.90:390,45,0	0/0:32,0:32:54.90:0,55,628	0/0:23,0:22:32.33:0,32,296	0/0:27,0:27:35.96:0,36,299	0/0:24,0:24:35.40:0,35,354	0/0:14,0:14:18.80:0,19,204	1/1:3,24:27:8.89:95,9,0	1/1:14,1:15:32.24:267,32,0	0/0:25,0:24:53.86:0,54,492	0/0:20,0:19:43.69:0,44,338	1/1:8,0:7:17.11:152,17,0	1/1:1,12:13:5.93:76,6,0	0/0:28,0:27:43.84:0,44,328	0/0:3,17:20:0.45:0,0,1	0/0:21,0:21:11.83:0,12,94	0/0:20,0:19:23.76:0,24,192	1/1:11,0:11:26.95:220,27,0	1/1:15,0:15:39.46:312,39,0	1/1:14,0:14:23.65:292,24,0	1/1:8,0:7:14.43:111,14,0
chr10	5789958	.	AC	A	3008.91	PASS	AB=0.947;AC=15;AF=0.278;AN=54;BaseQRankSum=-2.474;DP=489;FS=31.452;HRun=10;HaplotypeScore=77.1227;InbreedingCoeff=0.8783;MQ=79.02;MQ0=0;MQRankSum=-1.075;QD=16.35;ReadPosRankSum=4.841;VQSLOD=2.2943;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:16,32:48:95.96:831,96,0	0/0:6,0:6:15.92:0,16,108	0/0:15,0:15:14.70:0,15,134	0/0:16,0:15:20.95:0,21,182	0/0:10,0:13:26.51:0,27,203	0/0:13,0:12:30.04:0,30,319	0/0:22,2:25:16.95:0,17,593	0/0:13,0:14:13.79:0,14,73	1/1:7,15:22:44.99:390,45,0	0/0:9,0:16:19.10:0,19,149	0/0:7,0:13:17.87:0,18,172	0/0:6,0:14:17.57:0,18,128	0/0:15,0:15:32.44:0,32,263	0/0:2,0:9:5.55:0,6,28	0/1:17,1:18:1.07:1,0,411	1/1:2,15:18:44.03:371,44,0	1/1:5,21:26:64.80:551,65,0	0/0:13,0:14:29.68:0,30,210	1/1:6,11:17:35.99:312,36,0	1/1:3,15:18:44.97:388,45,0	0/0:12,0:19:20.63:0,21,159	1/1:4,13:17:41.93:357,42,0	0/0:9,0:16:5.85:0,6,47	0/0:18,0:22:46.66:0,47,337	0/0:16,1:17:10.07:0,10,332	0/0:7,0:16:22.65:0,23,136	0/0:11,0:21:11.14:0,11,109	./.
chr10	5790906	.	A	AT	7817.86	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-15.293;DP=679;FS=5.400;HRun=1;HaplotypeScore=61.1186;InbreedingCoeff=0.9987;MQ=85.93;MQ0=0;MQRankSum=-3.867;QD=40.30;ReadPosRankSum=2.200;VQSLOD=5.5861;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,105,1345	0/0:12,0:12:36.12:0,36,468	0/0:26,0:26:72.17:0,72,877	0/0:19,0:19:40.52:0,41,573	0/0:35,0:35:99:0,102,1323	1/1:1,17:18:42.14:629,42,0	1/1:0,25:25:57.19:854,57,0	0/0:36,0:36:99:0,105,1363	1/1:0,19:19:54.18:809,54,0	0/0:28,0:28:81.26:0,81,1051	0/0:27,0:27:78.25:0,78,1011	0/0:24,0:24:69.18:0,69,852	0/0:20,0:20:57.19:0,57,740	0/0:15,0:15:45.15:0,45,582	1/1:0,29:29:78.26:1169,78,0	1/1:0,15:15:42.14:630,42,0	0/0:34,0:34:99:0,99,1283	0/0:22,0:22:66.21:0,66,856	1/1:0,13:13:39.13:579,39,0	1/1:1,25:26:72.24:1079,72,0	0/0:24,0:24:69.21:0,69,876	1/1:0,20:20:54.18:809,54,0	0/0:34,0:33:93.29:0,93,1193	0/0:32,0:32:93.30:0,93,1207	1/1:0,29:29:84.28:1259,84,0	0/0:28,0:28:84.26:0,84,1079	0/0:27,0:27:81.25:0,81,1036	0/0:6,0:6:18.06:0,18,234
chr10	5793806	.	T	TCTTC	17758.07	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-13.768;DP=769;FS=9.797;HRun=0;HaplotypeScore=119.4401;InbreedingCoeff=0.9988;MQ=79.52;MQ0=2;MQRankSum=-2.496;QD=60.40;ReadPosRankSum=2.645;VQSLOD=6.4923;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,102,1766	1/1:2,7:9:18.06:475,18,0	0/0:24,0:24:54.18:0,54,954	0/0:25,0:25:63.15:0,63,1084	1/1:6,22:30:69.02:1478,69,0	0/0:21,0:21:60.18:0,60,1072	0/0:30,0:30:81.24:0,81,1421	0/0:28,0:28:69.21:0,69,1187	0/0:29,0:29:81.28:0,81,1471	1/1:8,23:31:78.24:1865,78,0	1/1:6,19:25:51.18:1344,51,0	1/1:1,24:26:69.24:1819,69,0	1/1:4,32:36:90.31:2375,90,0	1/1:2,29:30:81.28:2056,81,0	0/0:34,0:34:96.29:0,96,1668	0/0:26,0:26:75.26:0,75,1374	0/0:50,0:50:99:0,129,2341	1/1:0,22:21:60.17:1487,60,0	0/0:22,0:22:53.72:0,54,982	0/0:24,0:24:63.22:0,63,1159	1/1:4,27:32:81.19:1927,81,0	0/0:28,0:28:72.22:0,72,1262	1/1:5,17:23:56.93:1233,57,0	1/1:3,25:29:66.17:1699,66,0	0/0:21,0:21:60.21:0,60,1104	0/0:31,0:31:78.27:0,78,1430	0/0:29,0:29:81.26:0,81,1460	0/0:15,0:15:42.13:0,42,742
chr10	5794408	.	C	CG	7395.12	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-15.140;DP=813;FS=9.427;HRun=1;HaplotypeScore=78.7803;InbreedingCoeff=0.9937;MQ=77.37;MQ0=0;MQRankSum=-2.229;QD=41.08;ReadPosRankSum=-0.827;VQSLOD=4.4612;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,46:48:99:1975,132,0	0/0:11,0:11:33.11:0,33,428	0/0:24,0:24:62.23:0,62,784	0/0:26,0:25:62.76:0,63,725	0/0:28,0:28:75.24:0,75,970	0/0:23,0:23:66.21:0,66,857	0/0:36,0:36:99:0,105,1349	1/1:4,22:26:69.23:1021,69,0	0/0:24,0:24:69.20:0,69,867	0/0:32,0:32:93.26:0,93,1175	0/0:14,0:14:39.13:0,39,506	0/0:41,0:41:99:0,120,1538	0/0:29,0:29:84.27:0,84,1089	0/0:31,0:31:84.23:0,84,1068	0/0:42,0:42:99:0,126,1621	0/0:35,0:35:99:0,102,1309	1/1:0,24:24:72.24:1077,72,0	0/0:20,0:20:60.20:0,60,779	0/0:20,0:20:57.18:0,57,727	0/0:19,0:19:57.19:0,57,740	0/0:56,0:56:99:0,166,2141	0/0:24,0:24:72.19:0,72,915	0/0:25,0:25:72.23:0,72,930	0/0:44,0:44:99:0,126,1634	0/0:29,0:29:87.24:0,87,1097	1/1:3,27:30:78.26:1168,78,0	1/1:0,46:47:99:1974,132,0	1/1:0,5:5:12.04:180,12,0
chr10	5796644	.	G	GA	3497.03	PASS	AC=18;AF=0.346;AN=52;BaseQRankSum=13.255;DP=559;FS=6.029;HRun=0;HaplotypeScore=71.2051;InbreedingCoeff=0.9803;MQ=47.21;MQ0=16;MQRankSum=-12.509;QD=23.16;ReadPosRankSum=2.252;VQSLOD=5.1492;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:66.21:0,66,895	1/1:0,6:6:12.04:191,12,0	0/0:26,0:6:18.06:0,18,249	0/0:23,0:7:18.03:0,18,227	1/1:2,19:21:15.05:224,15,0	0/0:23,0:23:57.18:0,57,778	0/0:17,0:17:42.07:0,42,535	0/0:32,0:28:81.21:0,81,1086	0/0:22,0:22:63.19:0,63,863	1/1:1,18:17:45.15:698,45,0	1/1:3,12:15:15.05:224,15,0	1/1:0,15:15:24.08:382,24,0	1/1:1,30:28:57.19:895,57,0	1/1:1,22:21:27.09:429,27,0	0/0:24,0:24:66.21:0,66,906	0/0:35,0:35:96.31:0,96,1322	0/0:31,0:31:60.04:0,60,950	1/1:1,4:5:12.02:168,12,0	0/0:29,0:21:63.17:0,63,812	0/0:15,0:15:45.15:0,45,628	./.	0/0:19,0:19:57.17:0,57,773	1/1:2,14:14:18.06:286,18,0	./.	0/0:21,0:21:63.21:0,63,878	0/0:23,0:23:63.14:0,63,811	0/0:21,0:21:60.20:0,60,838	0/0:14,0:14:42.10:0,42,550
chr10	5797067	.	A	ATCTC	3038.74	PASS	AB=0.903;AC=46;AF=0.852;AN=54;BaseQRankSum=-0.527;DP=639;FS=9.745;HRun=0;HaplotypeScore=128.9310;InbreedingCoeff=0.3034;MQ=61.87;MQ0=22;MQRankSum=-1.028;QD=5.41;ReadPosRankSum=-3.455;VQSLOD=1.0138;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:29:9:0,9,80	1/1:7,0:10:2.74:12,3,0	./.	0/1:46,0:19:0:0,0,0	1/1:28,0:27:8.32:158,8,0	1/1:23,8:36:8.75:207,9,0	1/1:19,0:26:8.71:38,9,0	1/1:41,0:41:17.68:146,18,0	0/1:18,0:23:9.86:10,0,106	1/1:21,0:26:22.96:275,23,0	1/1:20,0:18:5.81:67,6,0	1/1:15,2:19:2.76:70,3,0	1/1:14,0:18:8.87:157,9,0	1/1:15,4:20:6.02:140,6,0	1/1:13,14:29:9.92:212,10,0	1/1:13,5:19:14.79:289,15,0	0/0:16,0:17:21.05:0,21,272	0/1:17,0:17:20.36:20,0,123	1/1:14,0:14:3.01:70,3,0	1/1:23,0:22:12.01:160,12,0	1/1:15,0:14:0.47:1,0,0	1/1:6,0:10:2.74:12,3,0	1/1:18,0:18:18.04:360,18,0	1/1:18,0:18:8.90:115,9,0	1/1:21,0:21:20.57:206,21,0	0/1:20,0:26:26.48:125,0,26	1/1:20,0:20:12.45:183,12,0	1/1:14,0:14:10.83:143,11,0
chr10	5797681	.	G	GAGCA	17351.26	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-16.564;DP=725;FS=1.314;HRun=0;HaplotypeScore=110.5258;InbreedingCoeff=0.9974;MQ=87.12;MQ0=0;MQRankSum=-4.564;QD=61.75;ReadPosRankSum=2.723;VQSLOD=6.9625;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,105,1927	1/1:0,17:17:48.16:1279,48,0	0/0:35,0:35:90.19:0,90,1500	0/0:20,0:20:42.09:0,42,667	1/1:3,26:29:75.17:1879,75,0	0/0:22,0:22:63.19:0,63,1107	0/0:24,0:24:72.23:0,72,1313	0/0:26,0:26:75.22:0,75,1271	0/0:24,0:24:69.24:0,69,1288	1/1:4,28:37:99:2645,105,0	1/1:1,7:11:24.04:580,24,0	1/1:3,30:33:81.28:2133,81,0	1/1:2,22:26:65.70:1759,66,0	1/1:2,26:29:72.25:1918,72,0	0/0:30,0:30:84.26:0,84,1491	0/0:30,0:30:81.28:0,81,1512	0/0:20,0:19:60.21:0,60,1120	1/1:7,16:24:42.14:1120,42,0	0/0:17,0:17:45.12:0,45,771	0/0:34,0:34:75.23:0,75,1336	1/1:4,24:29:69.19:1780,69,0	0/0:26,0:26:72.23:0,72,1312	1/1:2,17:20:45.11:1140,45,0	1/1:4,22:26:42.14:1119,42,0	0/0:27,0:27:81.26:0,81,1479	0/0:34,0:34:99:0,99,1815	0/0:34,0:34:99:0,102,1776	0/0:5,0:5:15.05:0,15,280
chr10	5798068	.	T	TTGTGTG	17894.99	PASS	AB=0.988;AC=32;AF=0.571;AN=56;BaseQRankSum=-9.774;DP=961;FS=15.966;HRun=0;HaplotypeScore=367.0523;InbreedingCoeff=0.4959;MQ=52.08;MQ0=6;MQRankSum=-3.643;QD=26.55;ReadPosRankSum=-3.898;VQSLOD=3.0690;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:54:99:1167,111,0	0/0:19,0:19:20:0,20,92	0/0:49,0:36:6.91:0,7,397	0/1:57,0:38:24.25:24,0,515	0/1:18,0:18:7.32:9,0,7	1/1:22,7:29:51.07:912,51,0	1/1:37,12:49:92.95:1541,93,0	0/1:44,0:44:99:259,0,105	1/1:21,20:41:93.31:2175,93,0	0/1:27,0:27:67.56:68,0,157	0/0:13,0:13:7.83:0,8,31	0/1:41,0:41:27.24:27,0,101	0/0:46,0:46:14.22:0,14,188	0/0:43,0:43:26.68:0,27,170	1/1:24,24:49:99:2374,102,0	1/1:15,26:42:99:2546,105,0	1/1:21,0:37:71.14:807,71,0	0/0:14,0:14:19.39:0,19,177	1/1:15,6:22:29.13:799,29,0	1/1:17,17:35:72.21:1533,72,0	0/0:43,0:42:3.41:0,3,25	1/1:16,8:24:38.58:831,39,0	0/0:18,0:18:5.83:0,6,23	0/0:42,0:42:22.17:0,22,167	1/1:12,12:25:25.77:1094,26,0	0/1:37,0:39:42.38:571,0,42	1/1:16,0:23:19.50:754,19,0	1/1:9,0:14:6.22:404,6,0
chr10	5798083	.	T	TCA	6619	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=4.691;DP=951;FS=21.028;HRun=0;HaplotypeScore=401.4279;InbreedingCoeff=0.9574;MQ=52.98;MQ0=3;MQRankSum=-10.255;QD=21.28;ReadPosRankSum=3.216;VQSLOD=4.4356;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:51:99:0,130,1231	1/1:7,11:18:42.01:696,42,0	0/0:44,0:33:89.30:0,89,1248	0/0:55,0:37:90.30:0,90,1154	1/1:14,7:21:5.93:94,6,0	0/0:25,0:25:55.98:0,56,574	0/0:47,0:47:99:0,122,1216	0/0:46,0:46:99:0,115,1572	0/0:42,0:42:99:0,105,965	1/1:16,15:31:84.08:1324,84,0	1/1:7,7:14:8.17:180,8,0	1/1:15,21:36:38.85:582,39,0	1/1:19,20:39:89.44:1398,89,0	1/1:15,18:33:38.49:634,38,0	0/0:46,0:46:99:0,118,1090	0/0:42,0:42:99:0,110,935	0/0:45,0:45:92.65:0,93,1094	1/1:7,8:15:36.03:591,36,0	0/0:22,0:22:47.35:0,47,418	0/0:37,0:37:99:0,103,1046	1/1:27,17:44:8.89:86,9,0	0/0:25,0:25:49.32:0,49,416	1/1:8,11:19:9.02:174,9,0	1/1:16,25:41:46.94:860,47,0	0/0:29,0:29:61.68:0,62,604	0/0:43,1:43:29.46:0,29,1273	0/0:24,0:24:60.41:0,60,626	0/0:12,0:12:34.59:0,35,369
chr10	5798104	.	G	GGT	21325.21	PASS	AB=0.792;AC=52;AF=0.929;AN=56;BaseQRankSum=0.312;DP=924;FS=3.914;HRun=0;HaplotypeScore=341.4387;InbreedingCoeff=0.3601;MQ=56.60;MQ0=2;MQRankSum=-2.148;QD=24.37;ReadPosRankSum=2.387;VQSLOD=4.6726;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,37:51:93.32:1522,93,0	1/1:11,0:20:30:266,30,0	0/0:48,0:32:34.53:0,35,522	0/1:50,0:36:28.99:29,0,428	1/1:9,0:25:47.97:416,48,0	0/1:6,15:21:29.92:599,0,30	1/1:14,26:42:0.18:1063,0,0	1/1:7,22:31:75.23:1187,75,0	1/1:13,24:37:31.80:1050,32,0	1/1:14,0:36:84.41:750,84,0	1/1:4,0:18:32.99:290,33,0	1/1:5,0:40:99:944,108,0	1/1:13,0:40:92.98:817,93,0	1/1:10,0:29:59.96:531,60,0	1/1:10,43:54:99:2105,129,0	1/1:11,27:38:75.26:1237,75,0	1/1:11,33:44:55.81:1434,56,0	1/1:6,1:16:3.24:211,3,0	1/1:8,12:20:36.12:594,36,0	1/1:9,22:32:60.21:989,60,0	1/1:13,0:47:26.36:239,26,0	1/1:4,14:18:42.14:693,42,0	1/1:8,0:24:41.98:369,42,0	1/1:27,0:44:23.32:238,23,0	1/1:5,22:27:63.22:1039,63,0	1/1:6,26:34:84.27:1339,84,0	1/1:7,17:24:54.18:878,54,0	1/1:1,10:11:30.10:495,30,0
chr10	5798132	.	CGCGT	C	13562.58	PASS	AB=1.000;AC=24;AF=0.429;AN=56;BaseQRankSum=9.901;DP=862;FS=3.362;HRun=0;HaplotypeScore=302.0886;InbreedingCoeff=0.8517;MQ=56.91;MQ0=1;MQRankSum=-16.040;QD=35.05;ReadPosRankSum=-3.342;VQSLOD=3.9743;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:48:99:0,120,3266	1/1:1,13:14:36.12:696,36,0	0/1:33,0:18:20.36:20,0,415	0/1:23,0:17:22.39:22,0,411	1/1:0,23:23:45.14:868,45,0	0/0:23,0:23:66.23:0,66,1807	0/0:39,0:39:99:0,102,2736	0/0:27,0:27:66.19:0,66,1691	0/0:38,0:38:99:0,102,2672	1/1:1,32:33:93.32:1795,93,0	1/1:2,17:19:45.15:870,45,0	1/1:2,43:45:99:2273,120,0	1/1:1,36:37:99:1967,102,0	1/1:0,34:34:84.29:1611,84,0	0/0:55,0:55:99:0,144,3931	0/0:34,0:34:84.29:0,84,2298	0/0:46,0:46:99:0,126,3440	1/1:1,16:17:42.14:809,42,0	0/0:21,0:21:63.21:0,63,1621	0/0:24,1:25:17.30:0,17,1911	1/1:6,38:43:41.83:801,42,0	0/0:21,0:21:60.21:0,60,1629	1/1:1,19:20:36.59:686,37,0	1/1:4,41:45:59.74:1143,60,0	0/0:26,0:26:69.24:0,69,1889	0/0:33,1:33:35.36:0,35,2375	0/0:30,0:30:87.30:0,87,2351	0/0:7,0:7:15.05:0,15,411
chr10	5799050	.	TC	T	8867.90	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=14.462;DP=717;FS=0.610;HRun=1;HaplotypeScore=68.8105;InbreedingCoeff=0.9909;MQ=94.45;MQ0=0;MQRankSum=-8.307;QD=38.22;ReadPosRankSum=3.143;VQSLOD=5.5142;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,148,2348	0/0:13,0:13:39.13:0,39,620	0/0:29,0:29:81.23:0,81,1227	0/0:36,1:37:66.55:0,67,1494	0/0:24,0:24:72.23:0,72,1121	1/1:0,20:20:54.18:755,54,0	1/1:0,29:29:75.25:1049,75,0	0/0:32,0:32:93.28:0,93,1404	1/1:0,25:25:72.24:1006,72,0	0/0:25,0:25:75.25:0,75,1176	0/0:14,0:14:42.13:0,42,642	0/0:20,0:20:60.18:0,60,913	0/0:25,0:25:75.22:0,75,1171	0/0:22,0:22:66.23:0,66,1052	1/1:0,27:27:78.26:1091,78,0	1/1:0,23:23:63.21:881,63,0	0/0:26,0:26:78.27:0,78,1246	0/0:21,0:21:63.21:0,63,992	1/1:0,19:19:57.19:797,57,0	1/1:0,29:29:81.27:1132,81,0	0/0:33,0:33:93.20:0,93,1380	1/1:0,30:30:78.22:1068,78,0	0/0:17,0:17:48.16:0,48,765	0/0:34,0:34:99:0,99,1582	1/1:0,30:30:78.26:1090,78,0	0/0:31,0:31:93.29:0,93,1439	0/0:29,0:29:87.28:0,87,1363	0/0:3,0:3:9.03:0,9,144
chr10	5800338	.	C	CT	1204.83	PASS	AB=0.739;AC=12;AF=0.231;AN=52;BaseQRankSum=8.611;DP=574;FS=52.312;HRun=0;HaplotypeScore=66.5378;InbreedingCoeff=-0.3070;MQ=47.35;MQ0=109;MQRankSum=2.145;QD=8.48;ReadPosRankSum=-2.298;VQSLOD=1.0408;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:35:96.32:0,96,1337	0/1:2,3:5:68.81:120,0,69	./.	./.	0/1:3,2:5:36.42:36,0,58	0/0:10,0:9:21.07:0,21,294	0/0:28,0:17:48.16:0,48,671	0/0:25,0:2:6.02:0,6,84	0/0:31,0:29:81.25:0,81,1100	0/1:5,6:11:99:197,0,174	0/1:6,5:11:99:201,0,140	0/1:8,6:14:99:192,0,258	0/1:4,5:9:99:156,0,127	0/1:12,5:17:53.40:53,0,391	0/0:31,0:31:84.27:0,84,1155	0/0:23,0:19:57.16:0,57,776	0/0:27,0:23:63.21:0,63,880	0/1:8,3:10:66.11:66,0,223	0/0:15,0:7:19.79:0,20,225	0/0:20,0:13:35.99:0,36,475	0/1:21,5:22:99:118,0,594	0/0:30,0:26:69.23:0,69,964	0/1:6,7:13:99:112,0,185	0/1:6,2:7:74.46:74,0,112	0/0:17,0:13:33.11:0,33,462	0/0:23,0:17:48.16:0,48,672	0/0:28,0:25:72.23:0,72,989	0/1:12,0:11:24.76:25,0,229
chr10	5800594	.	CA	C	1850.12	PASS	AB=0.980;AC=15;AF=0.268;AN=56;BaseQRankSum=17.812;DP=782;FS=1.894;HRun=1;HaplotypeScore=188.1965;InbreedingCoeff=0.3630;MQ=60.48;MQ0=6;MQRankSum=-10.717;QD=6.45;ReadPosRankSum=3.732;VQSLOD=0.9331;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,117,1682	1/1:14,0:14:25.83:143,26,0	0/0:35,0:23:37.33:0,37,941	0/0:25,1:21:15.84:0,16,747	1/1:24,0:24:12.20:72,12,0	0/0:25,0:25:75.25:0,75,1128	0/0:28,0:28:75.21:0,75,1106	0/0:24,0:24:72.22:0,72,1065	0/0:31,0:31:87.27:0,87,1334	0/1:48,1:48:42.57:447,0,43	1/1:19,0:19:16.17:91,16,0	0/1:28,1:29:62.47:288,0,62	0/1:41,0:41:55.46:313,0,55	1/1:34,0:34:59.18:444,59,0	0/0:41,0:41:99:0,120,1835	0/0:32,0:32:93.27:0,93,1416	0/0:21,0:21:59.84:0,60,928	0/1:8,0:8:29.43:57,0,29	0/0:25,0:24:72.22:0,72,1083	0/0:25,0:24:69.05:0,69,996	0/1:35,0:35:62.84:63,0,179	0/0:37,0:37:99:0,102,1542	0/1:19,2:21:9.61:75,0,10	0/1:13,0:13:33.13:38,0,33	0/0:40,0:40:99:0,111,1621	0/0:39,0:39:99:0,106,1652	0/0:14,0:14:36.12:0,36,561	0/0:12,0:12:33.11:0,33,516
chr10	5800595	.	AC	A	5495.50	PASS	AB=0.569;AC=20;AF=0.357;AN=56;BaseQRankSum=17.792;DP=775;FS=1.904;HRun=4;HaplotypeScore=176.9238;InbreedingCoeff=0.8288;MQ=60.65;MQ0=3;MQRankSum=-10.348;QD=19.35;ReadPosRankSum=2.094;VQSLOD=3.7567;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,99,1386	1/1:1,13:14:27.08:323,27,0	0/0:33,0:23:50.10:0,50,876	0/0:23,0:21:31.70:0,32,643	1/1:5,19:24:15.04:180,15,0	0/0:26,0:26:78.25:0,78,1075	0/0:28,0:28:72.16:0,72,964	0/0:25,0:25:69.21:0,69,933	0/0:31,0:31:90.29:0,90,1242	1/1:10,40:49:99:1373,105,0	1/1:4,16:20:17.26:199,17,0	1/1:6,22:28:60.18:717,60,0	1/1:8,33:41:81.20:950,81,0	1/1:2,32:34:84.26:1005,84,0	0/0:42,0:42:99:0,123,1658	0/0:30,1:31:90.28:0,90,1236	0/0:21,0:21:59.84:0,60,838	0/1:1,7:8:23.89:162,0,24	0/0:25,0:24:69.22:0,69,950	0/0:24,0:23:66.20:0,66,893	0/1:11,21:32:49.10:299,0,49	0/0:37,0:37:99:0,102,1404	1/1:3,17:20:14.67:179,15,0	1/1:4,9:13:9.03:108,9,0	0/0:40,0:40:99:0,108,1418	0/0:39,1:40:72.34:0,72,1417	0/0:14,0:14:39.11:0,39,528	0/0:12,0:12:33.11:0,33,462
chr10	5800809	.	CCATTCATTCATTCATTCATT	C	14843.86	PASS	AB=0.605;AC=21;AF=0.375;AN=56;BaseQRankSum=10.067;DP=728;FS=11.125;HRun=0;HaplotypeScore=386.7266;InbreedingCoeff=0.9024;MQ=61.16;MQ0=2;MQRankSum=-12.233;QD=60.84;ReadPosRankSum=2.946;VQSLOD=2.6955;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:31:75.26:0,75,4334	1/1:2,13:15:23.89:1293,24,0	0/0:27,0:22:36.04:0,36,1307	0/0:25,0:22:30.10:0,30,1413	1/1:4,18:22:15.05:650,15,0	0/0:12,0:29:57.18:0,57,2995	0/0:4,0:15:27.09:0,27,1455	0/0:14,0:24:39.13:0,39,924	0/0:12,0:44:99:0,99,5745	1/1:6,25:31:59.74:2297,60,0	1/1:1,15:16:27.09:1395,27,0	1/1:5,27:32:39.13:2106,39,0	1/1:4,28:32:36.12:1922,36,0	1/1:2,18:20:45.15:2426,45,0	0/0:8,0:28:69.24:0,69,3838	0/0:12,0:43:99:0,105,5610	0/0:23,0:23:57.18:0,57,4522	1/1:5,10:15:9.03:485,9,0	0/0:9,0:20:42.14:0,42,2388	0/0:9,0:32:81.28:0,81,3971	1/1:5,10:14:2.59:156,3,0	0/0:8,0:28:75.26:0,75,3135	1/1:3,20:23:30.10:1598,30,0	0/1:8,15:23:5:516,0,5	0/0:10,0:31:69.24:0,69,3752	0/0:14,0:30:53.91:0,54,780	0/0:5,0:33:65.62:0,66,551	0/0:15,0:20:21:0,21,291
chr10	5801286	.	TGCTCCGG	T	10786.95	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=16.394;DP=713;FS=14.201;HRun=0;HaplotypeScore=179.1846;InbreedingCoeff=0.9968;MQ=90.25;MQ0=0;MQRankSum=-17.178;QD=57.07;ReadPosRankSum=2.556;VQSLOD=4.2711;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,129,4841	0/0:6,0:6:15.05:0,15,600	0/0:38,0:38:99:0,102,3400	0/0:24,0:24:57.15:0,57,1725	0/0:33,0:33:96.31:0,96,3620	1/1:0,22:22:57.16:1422,57,0	1/1:4,25:29:66.23:1692,66,0	0/0:35,0:35:99:0,99,3613	1/1:1,23:25:54.19:1381,54,0	0/0:24,0:24:72.24:0,72,2543	0/0:22,0:22:66.22:0,66,2427	0/0:41,0:41:99:0,117,4459	0/0:27,0:27:72.25:0,72,2852	0/0:24,0:24:72.22:0,72,2677	1/1:1,23:24:57.20:1479,57,0	1/1:2,16:18:45.12:1111,45,0	0/0:28,0:28:84.27:0,84,3105	0/0:29,0:29:84.27:0,84,3240	1/1:1,14:15:41.98:706,42,0	1/1:0,15:15:39.13:972,39,0	0/0:38,0:38:99:0,108,4246	1/1:1,27:28:48.16:1245,48,0	0/0:15,0:15:42.14:0,42,1525	0/0:31,0:31:93.27:0,93,3299	1/1:0,13:13:30.10:778,30,0	0/0:34,0:34:96.32:0,96,3660	0/0:24,0:24:63.15:0,63,2060	0/0:7,0:7:21.06:0,21,746
chr10	5802952	.	TC	T	9211.43	PASS	AB=0.926;AC=23;AF=0.411;AN=56;BaseQRankSum=14.773;DP=667;FS=2.069;HRun=1;HaplotypeScore=69.1957;InbreedingCoeff=0.9323;MQ=88.24;MQ0=0;MQRankSum=-1.054;QD=35.43;ReadPosRankSum=2.892;VQSLOD=5.0306;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,114,1774	1/1:0,14:14:39.13:545,39,0	0/0:27,0:26:73.10:0,73,1112	0/0:23,0:22:14.42:0,14,712	1/1:0,29:29:87.18:1170,87,0	0/0:31,0:31:90.28:0,90,1391	0/0:22,0:22:66.15:0,66,937	0/0:43,0:43:99:0,126,1932	0/0:21,0:21:63.20:0,63,976	1/1:0,31:31:90.26:1208,90,0	1/1:0,17:17:51.17:713,51,0	1/1:0,17:17:51.17:713,51,0	1/1:0,26:26:66.22:923,66,0	1/1:0,18:18:51.17:713,51,0	0/0:29,0:29:87.28:0,87,1364	0/0:27,0:27:78.25:0,78,1221	0/0:14,0:14:42.12:0,42,644	1/1:0,15:15:45.15:618,45,0	0/0:25,0:25:75.19:0,75,1125	0/0:21,0:21:63.19:0,63,959	1/1:0,14:14:36.12:503,36,0	0/0:18,0:18:54.17:0,54,840	1/1:0,28:28:81.27:1132,81,0	1/1:0,26:26:69.23:965,69,0	0/0:28,0:28:84.29:0,84,1342	0/1:23,2:25:8.70:9,0,1000	0/0:29,0:29:87.28:0,87,1367	0/0:11,0:11:33.09:0,33,502
chr10	5803813	.	G	GA	7693.61	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-17.925;DP=676;FS=5.996;HRun=8;HaplotypeScore=86.1700;InbreedingCoeff=0.9935;MQ=70.96;MQ0=3;MQRankSum=-1.506;QD=26.81;ReadPosRankSum=-2.058;VQSLOD=4.5269;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,159,1455	0/0:2,0:14:24.44:0,24,72	0/0:39,0:25:44.86:0,45,486	0/0:40,0:20:51.57:0,52,392	0/0:1,0:28:53.15:0,53,157	1/1:3,15:17:39.12:450,39,0	1/1:3,17:20:42.12:485,42,0	1/1:3,29:30:84.20:946,84,0	1/1:4,12:16:24.07:277,24,0	0/0:2,0:20:37.22:0,37,112	0/0:2,0:18:28.52:0,29,84	0/0:2,0:13:16.85:0,17,52	0/0:1,0:10:12.22:0,12,36	0/0:3,0:20:30.55:0,31,90	1/1:3,22:25:60.18:692,60,0	1/1:1,14:15:39.12:450,39,0	0/0:42,0:41:99:0,108,979	0/0:9,0:27:34.53:0,35,102	1/1:6,19:25:54.12:599,54,0	1/1:1,23:24:60.17:685,60,0	0/0:0,0:21:38.70:0,39,114	1/1:4,29:33:84.24:962,84,0	0/0:1,0:20:38.70:0,39,114	0/0:3,0:22:36.66:0,37,108	1/1:5,20:25:57.17:658,57,0	1/1:3,23:26:69.20:796,69,0	1/1:3,15:18:33.10:381,33,0	1/1:0,10:10:27.08:312,27,0
chr10	5805541	.	GGTGTGT	G	6275.38	PASS	AB=0.680;AC=37;AF=0.685;AN=54;BaseQRankSum=-0.193;DP=632;FS=7.822;HRun=0;HaplotypeScore=219.2504;InbreedingCoeff=0.2696;MQ=66.70;MQ0=9;MQRankSum=-6.611;QD=13.16;ReadPosRankSum=-0.451;VQSLOD=2.9000;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:31,14:45:21.03:359,21,0	1/1:1,6:7:11.77:233,12,0	0/0:33,0:23:3.01:0,3,42	./.	1/1:7,12:20:29.91:513,30,0	0/0:13,0:18:7.57:0,8,97	0/0:15,0:23:7.88:0,8,47	0/0:25,0:24:8.17:0,8,80	0/1:12,0:21:7.60:8,0,40	1/1:15,16:35:62.65:1026,63,0	0/1:6,7:14:3.78:249,0,4	1/1:14,8:22:11.06:331,11,0	1/1:8,13:21:36.12:734,36,0	1/1:8,7:14:5.70:236,6,0	0/1:4,1:16:10.83:112,0,11	1/1:6,0:14:1.10:2,1,0	1/1:22,9:33:18.02:678,18,0	1/1:14,7:20:10.91:455,11,0	0/1:13,0:18:24.40:24,0,54	0/0:6,0:23:6.13:0,6,25	1/1:27,1:28:9.03:152,9,0	0/1:9,0:20:9.89:10,0,36	1/1:3,8:13:21.37:384,21,0	1/1:23,1:24:6.20:182,6,0	0/1:16,0:27:16.80:50,0,17	0/1:23,0:37:38.65:276,0,39	1/1:12,0:18:4.15:140,4,0	1/1:1,0:6:14.96:121,15,0
chr10	5805554	.	G	GCA	12615.97	PASS	AB=0.862;AC=39;AF=0.696;AN=56;BaseQRankSum=-0.311;DP=630;FS=3.327;HRun=0;HaplotypeScore=166.0955;InbreedingCoeff=-0.1090;MQ=54.29;MQ0=14;MQRankSum=-0.996;QD=22.13;ReadPosRankSum=9.740;VQSLOD=4.1439;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:35,6:41:42.25:609,0,42	1/1:7,0:7:14.90:164,15,0	0/0:29,0:15:38.79:0,39,509	0/0:31,0:13:23.79:0,24,430	0/1:22,1:22:34.66:419,0,35	1/1:13,0:13:36.73:452,37,0	1/1:24,0:24:1.84:542,2,0	0/1:6,16:21:7:668,0,7	0/1:19,0:19:29.66:457,0,30	0/1:32,2:34:99:736,0,126	1/1:12,0:12:25.69:257,26,0	0/1:21,1:22:22.69:524,0,23	1/1:17,3:21:26.69:265,27,0	0/1:16,1:16:9.10:235,0,9	1/1:16,0:16:38.40:463,38,0	0/1:15,0:15:13.98:267,0,14	0/1:29,2:31:99:639,0,120	0/1:13,8:20:56.91:523,0,57	1/1:19,0:19:52.67:674,53,0	1/1:26,0:26:47.15:711,47,0	0/1:13,22:34:99:117,0,130	1/1:24,0:24:35.26:522,35,0	0/1:13,1:14:43.44:176,0,43	0/1:16,9:25:19.39:434,0,19	1/1:30,0:29:32.48:985,32,0	1/1:33,1:34:35.07:1204,35,0	1/1:18,0:18:17.54:438,18,0	1/1:7,0:7:9.60:136,10,0
chr10	5805562	.	G	GCA	3767.53	PASS	AB=0.988;AC=16;AF=0.286;AN=56;BaseQRankSum=0.625;DP=668;FS=6.181;HRun=0;HaplotypeScore=204.5650;InbreedingCoeff=-0.0701;MQ=51.09;MQ0=14;MQRankSum=-7.209;QD=10.70;ReadPosRankSum=1.225;VQSLOD=2.5604;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:44,2:46:99:450,0,239	0/1:8,0:8:28.32:103,0,28	0/0:26,0:7:9.07:0,9,237	0/0:27,0:9:21.07:0,21,321	0/1:26,0:24:95.79:196,0,96	0/0:12,0:12:32.47:0,32,275	0/0:28,0:28:16.80:0,17,670	0/0:19,0:18:31.82:0,32,513	0/0:22,0:22:59.78:0,60,619	0/1:35,0:35:49.94:672,0,50	0/1:13,0:13:97.45:139,0,97	0/1:26,0:26:99:292,0,294	1/1:21,0:22:4.41:243,4,0	0/1:19,0:18:99:130,0,128	0/0:19,0:19:38.80:0,39,489	0/0:18,0:18:45:0,45,452	0/1:34,1:35:99:528,0,149	0/1:20,1:20:99:120,0,192	0/0:18,0:18:50.15:0,50,494	0/0:28,0:28:62.03:0,62,621	1/1:37,0:36:19.69:448,20,0	0/0:27,0:28:63.05:0,63,693	0/1:16,0:16:15.47:249,0,15	0/1:27,1:28:99:198,0,175	0/0:28,0:27:80.99:0,81,821	0/0:36,0:36:69.13:0,69,942	0/1:20,0:20:1.35:1,0,406	0/0:7,0:7:14.94:0,15,113
chr10	5806593	.	G	GAAAC	16018.86	PASS	AB=0.973;AC=23;AF=0.411;AN=56;BaseQRankSum=-15.108;DP=712;FS=2.518;HRun=0;HaplotypeScore=122.3448;InbreedingCoeff=0.9052;MQ=81.51;MQ0=1;MQRankSum=-5.226;QD=54.86;ReadPosRankSum=1.814;VQSLOD=6.2957;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,138,2522	1/1:1,5:6:18.06:399,18,0	0/0:19,0:19:39.75:0,40,770	0/0:22,0:22:46.59:0,47,856	1/1:4,24:27:66.61:1466,67,0	0/0:16,0:16:45.15:0,45,840	0/0:23,0:23:60.19:0,60,1082	0/0:26,0:26:66.18:0,66,1086	0/0:27,0:27:75.24:0,75,1347	1/1:9,21:31:87.28:2192,87,0	1/1:0,22:23:66.23:1757,66,0	1/1:3,26:30:78.27:1949,78,0	1/1:2,32:34:78.27:2076,78,0	1/1:2,16:19:45.11:1097,45,0	0/0:31,0:31:87.29:0,87,1574	0/0:30,0:30:84.29:0,84,1562	0/0:28,1:29:4.24:0,4,1376	1/1:1,14:15:39.13:1040,39,0	0/0:19,0:19:57.19:0,57,1030	0/0:22,0:22:60.18:0,60,1051	1/1:3,24:29:66.18:1616,66,0	0/0:30,0:30:81.27:0,81,1480	1/1:6,15:23:57.02:1263,57,0	1/1:3,15:18:50.99:1135,51,0	0/0:25,0:25:75.21:0,75,1291	0/1:35,1:36:29.41:29,0,1763	0/0:39,0:38:99:0,99,1839	0/0:13,0:13:39.13:0,39,688
chr10	5808601	.	TGGAGGAGGAGGAGGAGGAGGAGGAGGAGGA	T	1560.18	PASS	AB=1.000;AC=18;AF=0.450;AN=40;BaseQRankSum=3.894;DP=362;FS=12.087;HRun=0;HaplotypeScore=229.8574;InbreedingCoeff=0.4378;MQ=78.48;MQ0=11;MQRankSum=2.233;QD=10.40;ReadPosRankSum=3.182;VQSLOD=1.4766;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:17:3.01:0,3,95	0/0:3,0:3:0.89:0,1,2	0/1:20,0:13:0:0,0,0	0/0:22,0:19:0.47:0,0,1	1/1:2,2:4:6.02:277,6,0	0/0:7,0:7:3:0,3,27	0/0:8,0:8:0.47:0,0,1	0/0:19,0:18:9.13:0,9,375	./.	1/1:9,4:12:12.04:431,12,0	1/1:9,4:13:4.91:274,5,0	./.	./.	1/1:20,10:30:4.25:232,4,0	0/0:12,0:12:2.04:0,2,6	0/0:14,0:14:4.83:0,5,56	0/1:15,0:15:0:0,0,0	1/1:15,8:22:3.01:229,3,0	1/1:3,0:4:3.01:91,3,0	./.	1/1:20,0:18:5:95,5,0	./.	1/1:8,0:7:3.01:48,3,0	0/0:17,7:24:5.38:0,5,44	./.	0/0:13,0:12:3.01:0,3,365	./.	./.
chr10	5808625	.	A	AC	254.79	PASS	AB=0.900;AC=8;AF=0.143;AN=56;BaseQRankSum=5.453;DP=244;FS=2.341;HRun=0;HaplotypeScore=52.1973;InbreedingCoeff=-0.2090;MQ=49.97;MQ0=22;MQRankSum=-4.692;QD=4.39;ReadPosRankSum=3.816;VQSLOD=3.2443;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:12:24.34:0,24,206	0/1:4,0:4:16.89:17,0,74	0/0:7,0:3:5.93:0,6,40	0/0:7,0:5:8.92:0,9,82	0/1:5,0:4:35.93:66,0,36	0/0:11,0:9:18.06:0,18,250	0/0:4,0:4:5.67:0,6,66	0/0:19,0:18:34.68:0,35,410	0/0:11,0:11:29.85:0,30,288	0/1:9,0:7:22.42:22,0,149	0/1:6,0:6:32.90:68,0,33	0/1:4,2:6:69.50:69,0,129	0/1:5,2:7:58.69:59,0,69	0/0:19,0:19:29.06:0,29,295	0/0:7,0:7:12.96:0,13,135	0/0:8,0:7:19.99:0,20,181	0/0:8,0:7:12.45:0,12,145	0/0:16,0:15:23.24:0,23,275	0/0:5,0:2:5.85:0,6,55	0/0:4,0:4:6.01:0,6,66	0/1:13,3:14:51.98:52,0,161	0/0:8,0:3:6:0,6,51	0/1:4,1:4:34.14:34,0,70	0/0:14,0:14:13.34:0,13,94	0/0:3,0:2:6.01:0,6,67	0/0:8,0:7:16.27:0,16,179	0/0:4,0:4:9.01:0,9,107	0/0:6,0:6:12.04:0,12,202
chr10	5808872	.	TCCTTCTCCTCTTC	T	15172.97	PASS	AC=32;AF=0.593;AN=54;BaseQRankSum=13.516;DP=504;FS=16.417;HRun=0;HaplotypeScore=195.9330;InbreedingCoeff=0.9686;MQ=70.12;MQ0=0;MQRankSum=-13.745;QD=59.50;ReadPosRankSum=2.820;VQSLOD=3.5603;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,11:18:27.09:1042,27,0	1/1:5,4:9:9.03:347,9,0	0/0:24,0:23:48.16:0,48,2579	0/0:27,0:26:66.69:0,67,2760	1/1:6,16:22:39.13:1401,39,0	0/0:23,0:23:60.21:0,60,3640	0/0:30,0:30:87.30:0,87,5370	1/1:13,5:18:15.05:389,15,0	0/0:22,0:22:60.21:0,60,3519	1/1:6,12:18:33.01:1175,33,0	1/1:5,15:20:36.12:1389,36,0	1/1:5,16:21:33.11:1274,33,0	1/1:1,16:17:42.14:1622,42,0	1/1:8,13:21:36.12:1390,36,0	0/0:19,0:19:54.19:0,54,3208	0/0:23,0:23:66.23:0,66,4015	1/1:6,10:16:18.06:695,18,0	1/1:5,10:15:18.06:695,18,0	0/0:24,0:24:60.21:0,60,3410	0/0:12,0:12:27.09:0,27,1729	1/1:6,5:11:6.02:232,6,0	0/0:24,0:24:69.22:0,69,4069	1/1:0,9:9:24.08:886,24,0	1/1:3,7:10:15.52:580,16,0	0/0:17,0:17:45.15:0,45,2796	1/1:4,11:14:30.10:1014,30,0	1/1:5,10:15:27.09:1043,27,0	./.
chr10	5810648	.	C	CA	8555.36	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-16.418;DP=661;FS=3.597;HRun=8;HaplotypeScore=65.1977;InbreedingCoeff=0.9973;MQ=77.64;MQ0=0;MQRankSum=-2.033;QD=28.52;ReadPosRankSum=1.827;VQSLOD=5.4385;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:90.05:0,90,824	0/0:13,0:13:36.01:0,36,329	0/0:18,0:18:35.38:0,35,294	0/0:12,0:12:27:0,27,241	0/0:27,1:28:28.40:0,28,515	1/1:3,23:26:63.19:727,63,0	1/1:2,22:24:60.18:693,60,0	1/1:6,17:23:51.15:589,51,0	1/1:4,26:30:87.26:998,87,0	0/0:20,0:21:53.52:0,54,476	0/0:19,0:19:51.03:0,51,467	0/0:13,0:13:36.02:0,36,329	0/0:26,0:26:72.03:0,72,658	0/0:30,0:30:72.04:0,72,659	1/1:4,19:23:57.17:658,57,0	1/1:2,20:22:54.16:623,54,0	0/0:40,0:40:99:0,111,1010	0/0:20,0:20:54.03:0,54,494	1/1:0,14:14:42.12:485,42,0	1/1:1,22:23:63.15:713,63,0	0/0:32,0:32:83.98:0,84,760	1/1:5,24:29:63.19:727,63,0	0/0:31,0:31:78.04:0,78,714	0/0:26,0:26:65.98:0,66,596	1/1:3,27:30:24.91:746,25,0	1/1:4,23:27:44.75:769,45,0	1/1:6,17:23:57.17:655,57,0	1/1:1,5:6:15.04:173,15,0
chr10	5811413	.	C	CAA	2577.98	PASS	AB=0.834;AC=10;AF=0.179;AN=56;BaseQRankSum=14.648;DP=784;FS=2.565;HRun=5;HaplotypeScore=171.0553;InbreedingCoeff=-0.2337;MQ=66.15;MQ0=2;MQRankSum=-11.208;QD=8.29;ReadPosRankSum=-1.709;VQSLOD=-0.7594;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:31,2:35:49.28:49,0,1186	0/0:13,0:13:39.11:0,39,606	0/0:53,0:44:99:0,106,1629	0/0:53,0:46:98.79:0,99,1657	0/0:29,0:29:87.30:0,87,1406	0/1:10,8:18:99:356,0,435	0/1:17,6:23:99:314,0,630	0/0:25,0:25:11.43:0,11,965	0/1:22,8:31:99:344,0,933	0/0:38,0:38:99:0,111,1763	0/0:15,0:15:45.15:0,45,724	0/0:27,0:27:78.25:0,78,1230	0/0:23,0:23:69.23:0,69,1100	0/0:23,0:23:69.22:0,69,1084	0/1:38,13:52:99:554,0,1610	0/1:30,12:42:99:545,0,1279	0/1:24,5:29:99:187,0,820	0/0:16,0:16:2.87:0,3,641	0/0:17,0:16:48.15:0,48,748	0/1:19,2:22:99:104,0,797	0/0:29,0:29:87.26:0,87,1367	0/1:33,2:37:84.63:85,0,1373	0/0:27,0:27:81.25:0,81,1257	0/0:34,0:34:99:0,99,1548	0/1:17,5:22:99:185,0,708	0/0:21,0:21:21.24:0,21,814	0/0:24,0:24:24.14:0,24,431	0/0:6,0:6:6.29:0,6,142
chr10	5811417	.	C	CAG	2777.13	PASS	AB=0.861;AC=13;AF=0.232;AN=56;BaseQRankSum=14.948;DP=792;FS=5.140;HRun=0;HaplotypeScore=181.4374;InbreedingCoeff=-0.3106;MQ=66.98;MQ0=2;MQRankSum=-12.053;QD=7.76;ReadPosRankSum=0.700;VQSLOD=2.7866;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:36,2:38:99:121,0,1216	0/0:14,0:14:39.13:0,39,636	0/0:56,0:46:99:0,114,1783	0/0:56,0:50:99:0,114,1770	0/0:28,0:28:84.29:0,84,1365	0/1:10,8:18:99:358,0,435	0/1:16,6:23:99:270,0,656	0/1:24,0:24:55.35:55,0,888	0/1:21,8:29:99:357,0,884	0/0:33,0:33:99:0,99,1611	0/0:16,0:16:45.12:0,45,706	0/0:28,0:28:84.27:0,84,1342	0/0:23,0:23:69.24:0,69,1121	0/0:22,0:22:66.23:0,66,1076	0/1:36,14:50:99:564,0,1515	0/1:28,13:41:99:553,0,1180	0/1:22,7:29:99:213,0,766	0/0:19,0:19:34.01:0,34,740	0/0:18,0:17:43.12:0,43,749	0/1:20,3:23:99:107,0,812	0/0:32,0:32:93.26:0,93,1432	0/1:35,2:37:91.10:91,0,1333	0/0:30,0:30:84.29:0,84,1348	0/0:33,0:33:93.32:0,93,1517	0/1:17,5:22:99:187,0,708	0/1:18,0:18:34.88:35,0,656	0/0:25,0:25:4.08:0,4,339	0/1:6,0:6:19.72:20,0,122
chr10	5811422	.	A	AG	5192.18	PASS	AB=0.831;AC=14;AF=0.250;AN=56;BaseQRankSum=16.928;DP=871;FS=8.678;HRun=0;HaplotypeScore=194.8178;InbreedingCoeff=-0.3384;MQ=63.17;MQ0=5;MQRankSum=-13.630;QD=11.02;ReadPosRankSum=-0.572;VQSLOD=4.4829;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:29,14:43:99:286,0,858	0/0:14,0:14:42.14:0,42,580	0/0:61,0:44:99:0,122,1547	0/0:54,0:48:99:0,124,1626	0/0:27,0:27:81.27:0,81,1132	0/1:12,8:20:99:461,0,260	0/1:18,8:27:99:437,0,502	0/1:41,4:44:99:728,0,753	0/1:23,9:32:99:418,0,696	0/0:31,0:31:93.31:0,93,1299	0/0:18,0:18:51.17:0,51,710	0/0:27,0:27:81.27:0,81,1133	0/0:21,0:21:60.20:0,60,839	0/0:23,0:23:66.22:0,66,921	0/1:33,15:48:99:629,0,1132	0/1:30,13:43:99:680,0,796	0/1:21,12:33:99:276,0,562	0/0:19,0:19:54.18:0,54,755	0/1:24,0:21:99:107,0,446	0/1:27,4:31:99:356,0,668	0/0:31,0:31:93.23:0,93,1274	0/1:36,10:46:99:424,0,1086	0/0:31,0:31:87.29:0,87,1213	0/0:33,0:33:96.24:0,96,1315	0/1:25,8:33:99:342,0,543	0/1:15,0:16:46.59:47,0,346	0/1:30,0:30:3.09:3,0,185	0/0:9,0:9:0.22:0,0,52
chr10	5811425	.	A	ACAACAACAACAGCAGCAGCAG	41189.76	PASS	AB=0.959;AC=19;AF=0.339;AN=56;BaseQRankSum=5.491;DP=902;FS=0.282;HRun=0;HaplotypeScore=515.3337;InbreedingCoeff=0.1190;MQ=62.54;MQ0=6;MQRankSum=-15.002;QD=80.61;ReadPosRankSum=0.306;VQSLOD=3.4400;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:42,0:42:99:1612,0,348	0/0:14,0:14:39.13:0,39,1970	0/0:64,0:43:71.93:0,72,2039	0/0:53,0:47:80.80:0,81,2478	0/0:27,0:27:78.25:0,78,3836	0/1:21,0:21:23.04:1781,0,23	1/1:27,0:27:42.61:2726,43,0	1/1:45,0:44:99:4675,110,0	0/1:32,0:32:20.79:3691,0,21	0/0:28,0:28:72.24:0,72,3590	0/0:17,0:17:45.13:0,45,1640	0/0:27,0:27:69.23:0,69,3020	0/0:23,0:23:66.19:0,66,3198	0/0:22,0:22:57.18:0,57,2775	0/1:49,0:49:99:4531,0,218	0/1:43,0:43:42.59:4434,0,43	0/1:34,0:34:99:2321,0,186	0/0:21,0:21:57.15:0,57,2503	0/1:26,0:23:37.75:1031,0,38	0/1:31,0:31:50.31:2179,0,50	0/0:30,0:30:87.30:0,87,4477	0/1:49,0:49:88.39:3349,0,88	0/0:30,0:30:81.26:0,81,3703	0/0:34,0:34:88.11:0,88,3987	0/1:33,0:33:99:2126,0,154	0/1:5,7:29:98.30:2605,0,98	1/1:4,24:39:30.10:2941,30,0	1/1:1,9:11:12.04:1185,12,0
chr10	5813367	.	A	AACACACACACACACAC	9835.65	PASS	AB=0.646;AC=29;AF=0.518;AN=56;BaseQRankSum=9.970;DP=716;FS=4.711;HRun=0;HaplotypeScore=285.9348;InbreedingCoeff=0.8234;MQ=70.33;MQ0=3;MQRankSum=-10.139;QD=28.02;ReadPosRankSum=-6.819;VQSLOD=2.1744;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:21:2.71:23,3,0	0/0:14,0:14:39.07:0,39,1196	0/0:44,0:33:19.95:0,20,962	0/0:25,0:23:3.99:0,4,554	0/0:27,0:33:66.70:0,67,3172	1/1:14,1:29:12.04:736,12,0	1/1:9,0:17:9.03:439,9,0	1/1:22,0:31:36.10:562,36,0	1/1:14,0:32:20.94:1103,21,0	0/0:30,0:30:59.87:0,60,2394	0/0:31,0:30:73.08:0,73,2709	0/0:28,0:28:69.21:0,69,2813	0/0:37,0:38:72.25:0,72,3176	0/0:18,0:18:48.15:0,48,1899	1/1:7,0:17:9.03:467,9,0	1/1:5,0:24:23.60:1178,24,0	1/1:12,1:20:12.04:770,12,0	0/0:25,0:25:42.12:0,42,1691	1/1:6,0:13:27.09:1169,27,0	1/1:15,0:38:18.06:936,18,0	0/0:23,0:24:57.16:0,57,2086	1/1:10,0:23:6.02:298,6,0	0/0:29,0:30:65.58:0,66,2594	0/0:22,0:23:57.18:0,57,2341	1/1:7,1:19:12.04:736,12,0	0/1:14,0:31:99:753,0,114	1/1:9,0:26:33.34:567,33,0	1/1:2,0:9:6.02:98,6,0
chr10	5815000	.	AGT	A	758.49	PASS	AB=0.802;AC=11;AF=0.204;AN=54;BaseQRankSum=-1.406;DP=708;FS=0.000;HRun=0;HaplotypeScore=146.9437;InbreedingCoeff=0.3678;MQ=62.28;MQ0=6;MQRankSum=-1.919;QD=4.80;ReadPosRankSum=2.890;VQSLOD=2.6872;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:40:8.98:0,9,72	0/0:7,0:16:19.05:0,19,138	./.	0/0:18,0:13:3.01:0,3,41	0/0:8,0:28:25.07:0,25,198	1/1:14,0:14:0.21:0,0,0	0/0:30,0:28:5.99:0,6,50	0/1:24,0:24:24.50:24,0,51	0/0:23,0:23:8.78:0,9,72	0/0:14,0:26:25.09:0,25,223	0/0:12,0:21:12.53:0,13,160	0/0:10,0:21:21.02:0,21,217	0/0:11,0:21:21:0,21,198	0/0:4,0:19:18:0,18,172	0/0:22,0:22:2.97:0,3,23	0/0:33,0:32:1.88:0,2,87	1/1:12,0:35:25.57:126,26,0	0/0:9,0:25:18.01:0,18,173	0/0:13,0:13:14.64:0,15,119	0/0:24,0:22:5.50:0,5,48	0/0:25,0:47:21.36:0,21,221	1/1:18,0:17:0.47:1,0,0	0/0:10,0:21:17.97:0,18,150	0/0:18,0:49:63.02:0,63,615	0/0:27,0:26:14.86:0,15,139	0/1:16,7:24:15.52:274,0,16	1/1:13,17:31:35.93:381,36,0	0/1:5,7:12:33.46:88,0,33
chr10	5816587	.	GTCTA	G	2901.27	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=9.349;DP=446;FS=20.984;HRun=0;HaplotypeScore=79.8049;InbreedingCoeff=0.9721;MQ=61.20;MQ0=6;MQRankSum=0.800;QD=31.88;ReadPosRankSum=3.552;VQSLOD=1.9679;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:54.14:0,54,1153	0/0:11,0:11:30.09:0,30,718	0/0:24,0:15:35.93:0,36,483	0/0:20,0:14:27.76:0,28,373	0/0:30,0:30:87.21:0,87,1837	1/1:8,7:15:36.06:558,36,0	1/1:0,14:14:24.08:417,24,0	0/0:27,0:27:69.17:0,69,1223	1/1:1,2:3:6.02:106,6,0	0/0:16,0:16:39.13:0,39,850	0/0:12,0:12:36.10:0,36,786	0/0:8,0:8:21.07:0,21,510	0/0:21,0:21:54.15:0,54,1130	0/0:8,0:8:21.07:0,21,416	1/1:1,7:8:12.04:212,12,0	1/1:0,6:6:18.06:318,18,0	0/0:26,0:26:60.66:0,61,1317	0/0:21,0:21:48.10:0,48,911	1/1:2,7:8:21.01:307,21,0	1/1:0,18:17:33.11:560,33,0	0/0:18,0:18:54.15:0,54,1138	1/1:0,9:9:18.53:316,19,0	0/0:12,0:12:36.11:0,36,786	0/0:12,0:12:30.07:0,30,532	1/1:1,8:9:18.06:318,18,0	0/0:14,0:14:39.10:0,39,710	0/0:36,0:36:99:0,105,2264	0/0:9,0:9:27.07:0,27,553
chr10	5816657	.	C	CTAT	305	PASS	AB=0.625;AC=15;AF=0.268;AN=56;BaseQRankSum=8.526;DP=360;FS=2.381;HRun=0;HaplotypeScore=68.5948;InbreedingCoeff=0.3177;MQ=78.71;MQ0=4;MQRankSum=-4.289;QD=3.96;ReadPosRankSum=1.019;VQSLOD=1.5502;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:5,0:19:40.86:41,0,55	0/0:5,0:5:15.02:0,15,201	0/0:11,0:6:2.18:0,2,52	0/0:34,0:21:8.97:0,9,157	0/0:18,0:18:54.17:0,54,899	0/1:4,1:13:85.57:86,0,122	1/1:0,0:2:3:27,3,0	0/0:35,0:35:99:0,102,1781	1/1:0,0:2:3:27,3,0	0/0:16,0:16:48.15:0,48,818	0/0:9,0:9:24.07:0,24,415	0/0:6,0:6:18.06:0,18,320	0/0:7,0:7:21.07:0,21,361	0/0:10,0:10:30.10:0,30,543	1/1:2,0:3:3:27,3,0	1/1:0,0:3:0.67:24,1,0	0/0:20,0:20:57.19:0,57,1013	0/0:24,0:25:69.18:0,69,1194	0/1:1,0:11:46.21:92,0,46	0/1:7,0:9:26.61:47,0,27	0/0:12,0:12:36.12:0,36,579	0/1:2,0:4:31.35:46,0,31	0/0:8,0:8:24.08:0,24,429	0/0:9,0:9:24.08:0,24,431	1/1:9,0:10:8.11:45,8,0	0/0:20,0:20:60.20:0,60,1056	0/0:25,0:25:72.21:0,72,1203	0/0:12,0:12:36.12:0,36,615
chr10	5817920	.	ACG	A	1063.79	PASS	AB=0.976;AC=12;AF=0.214;AN=56;BaseQRankSum=7.488;DP=1049;FS=1.800;HRun=0;HaplotypeScore=258.9635;InbreedingCoeff=0.2165;MQ=47.82;MQ0=25;MQRankSum=0.750;QD=3.66;ReadPosRankSum=3.538;VQSLOD=2.6701;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:23.09:0,23,321	0/0:14,0:14:16.74:0,17,174	0/0:60,0:12:30.03:0,30,407	0/0:62,0:20:40.84:0,41,844	0/0:23,0:22:50.29:0,50,531	0/1:21,1:20:5.53:95,0,6	0/1:26,1:17:13.30:13,0,60	0/0:30,0:16:30.96:0,31,289	1/1:44,0:41:29.23:298,29,0	0/0:49,0:49:99:0,124,1597	0/0:34,0:34:51.79:0,52,739	0/0:46,1:47:41.13:0,41,1001	0/0:33,0:33:64.48:0,64,795	0/0:46,0:46:99:0,114,1352	0/1:32,0:26:6.04:6,0,84	1/1:28,0:28:24.22:218,24,0	0/0:38,0:38:60.96:0,61,598	0/0:25,0:23:54.12:0,54,626	0/1:27,0:23:99:123,0,108	0/1:41,0:39:63.31:240,0,63	0/0:111,1:109:99:0,192,2432	0/1:35,0:33:34.20:105,0,34	0/0:31,1:32:17.20:0,17,639	0/0:63,0:63:99:0,120,1413	0/1:21,1:19:8.09:88,0,8	0/0:34,0:33:31.76:0,32,472	0/0:22,0:20:31.15:0,31,245	0/1:12,1:13:38.98:39,0,196
chr10	5817925	.	AGT	A	14556.95	PASS	AB=0.802;AC=44;AF=0.786;AN=56;BaseQRankSum=-5.616;DP=1014;FS=0.000;HRun=0;HaplotypeScore=205.7022;InbreedingCoeff=0.5389;MQ=47.63;MQ0=24;MQRankSum=9.009;QD=16.87;ReadPosRankSum=6.466;VQSLOD=4.6382;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:14,13:26:8.10:116,8,0	1/1:0,15:15:18.53:235,19,0	0/0:51,0:8:11.14:0,11,199	0/0:58,1:17:29.12:0,29,429	1/1:3,21:23:41.81:546,42,0	1/1:6,14:18:21.31:251,21,0	1/1:16,11:17:8.62:103,9,0	0/0:25,1:13:11.92:0,12,161	1/1:16,26:39:48.58:657,49,0	1/1:9,38:47:99:1410,114,0	1/1:6,30:36:55.46:727,55,0	1/1:6,39:45:92.52:1155,93,0	1/1:4,26:30:57.07:727,57,0	1/1:8,35:43:84.27:1092,84,0	1/1:10,20:24:5.03:77,5,0	1/1:7,21:28:46.44:608,46,0	0/1:4,35:39:13.09:868,0,13	1/1:3,21:22:58.31:775,58,0	0/1:15,13:23:45.06:403,0,45	1/1:15,20:34:37.85:429,38,0	1/1:30,84:110:99:1794,138,0	1/1:13,20:31:23.75:302,24,0	1/1:3,29:32:50.57:731,51,0	1/1:12,54:65:99:1326,102,0	1/1:7,14:18:14.13:180,14,0	0/1:35,0:33:37.04:37,0,220	0/1:22,0:20:6.30:6,0,153	0/0:14,0:14:14.72:0,15,125
chr10	5817931	.	TGTGTGA	T	1533.63	PASS	AB=0.921;AC=7;AF=0.125;AN=56;BaseQRankSum=-0.417;DP=1024;FS=24.021;HRun=0;HaplotypeScore=295.5637;InbreedingCoeff=0.2279;MQ=46.52;MQ0=25;MQRankSum=-9.814;QD=10.16;ReadPosRankSum=-3.115;VQSLOD=1.1586;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:24:6.84:0,7,69	0/0:15,0:15:17.70:0,18,222	0/0:45,0:6:8.70:0,9,147	0/0:56,0:14:20.94:0,21,425	0/0:25,0:24:45.14:0,45,609	0/0:21,0:19:13.76:0,14,171	0/0:31,0:18:6.02:0,6,84	0/1:26,2:17:1.92:385,0,2	0/0:43,0:40:33.49:0,33,587	0/0:46,0:46:99:0,109,1504	0/0:32,0:32:57.03:0,57,739	0/0:48,0:48:98.21:0,98,1384	0/0:32,0:32:62.94:0,63,825	0/0:44,0:44:83.58:0,84,1122	0/0:32,0:26:5.97:0,6,84	0/0:30,0:29:46.98:0,47,644	0/0:39,0:39:69.21:0,69,1039	0/0:25,0:23:12.71:0,13,754	0/1:25,0:18:53.51:54,0,396	0/0:36,0:35:27.79:0,28,357	0/0:109,0:105:99:0,144,1941	0/0:31,0:29:9.69:0,10,239	0/0:36,0:36:60.19:0,60,862	0/0:67,0:67:99:0,110,1470	0/1:28,0:23:6.51:7,0,97	0/1:27,12:33:84.39:808,0,84	1/1:11,10:19:18:310,18,0	0/1:9,1:10:72.99:103,0,73
chr10	5817935	.	TGA	T	5456.09	PASS	AB=0.981;AC=46;AF=0.821;AN=56;BaseQRankSum=-2.535;DP=1002;FS=3.707;HRun=0;HaplotypeScore=236.4244;InbreedingCoeff=0.1979;MQ=46.08;MQ0=28;MQRankSum=7.790;QD=6.01;ReadPosRankSum=8.695;VQSLOD=3.6285;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:22:8.09:47,8,0	1/1:15,0:15:17.23:100,17,0	0/0:43,0:6:8.08:0,8,150	0/0:51,0:11:19.87:0,20,342	1/1:26,0:24:17.85:196,18,0	1/1:19,0:16:13.05:88,13,0	1/1:30,0:17:8.54:45,9,0	0/1:30,0:20:75.18:120,0,75	1/1:38,0:36:36.85:290,37,0	1/1:45,0:44:58.42:403,58,0	1/1:31,1:32:52.95:330,53,0	0/1:48,0:48:2.15:353,0,2	0/1:31,1:32:14.92:269,0,15	1/1:44,0:44:39.53:365,40,0	1/1:29,1:24:4.73:26,5,0	1/1:29,0:28:24.22:219,24,0	1/1:39,0:39:14.06:338,14,0	1/1:25,0:22:54.06:294,54,0	1/1:23,0:16:0.51:134,1,0	1/1:34,4:35:34.44:209,34,0	1/1:104,7:105:45.59:539,46,0	1/1:31,2:30:23.01:130,23,0	1/1:37,0:37:27.51:280,28,0	1/1:61,5:65:56.23:447,56,0	1/1:26,1:22:10.87:84,11,0	0/1:37,0:31:99:100,0,116	0/1:20,0:18:25.39:25,0,101	0/1:10,1:11:24:24,0,86
chr10	5817937	.	A	AGT	448.20	PASS	AB=0.972;AC=7;AF=0.125;AN=56;BaseQRankSum=5.758;DP=1004;FS=5.943;HRun=0;HaplotypeScore=259.3976;InbreedingCoeff=0.1430;MQ=45.87;MQ0=27;MQRankSum=-8.127;QD=2.97;ReadPosRankSum=-1.739;VQSLOD=1.7614;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:23:8.86:0,9,112	0/0:15,0:15:17.73:0,18,207	0/0:41,0:6:8.80:0,9,95	0/0:48,0:11:20.80:0,21,249	0/0:27,0:25:45.13:0,45,557	0/0:18,0:16:13.75:0,14,156	0/0:27,1:15:6.02:0,6,78	0/1:32,0:22:20.73:83,0,21	0/0:38,0:36:45.08:0,45,554	0/0:45,0:44:99:0,108,1389	0/0:33,0:33:56.75:0,57,664	0/0:49,0:48:99:0,109,1316	0/0:34,0:33:71.79:0,72,841	0/0:41,0:41:89.63:0,90,1125	0/0:30,0:24:6.02:0,6,78	0/0:30,0:28:47.76:0,48,581	0/0:41,0:41:78.58:0,79,915	0/0:26,0:23:48.93:0,49,757	0/1:21,2:16:99:108,0,358	0/0:38,1:36:23.93:0,24,325	0/0:109,0:103:99:0,150,1931	0/0:35,0:32:19.87:0,20,231	0/0:36,0:36:60.12:0,60,743	0/0:66,0:65:99:0,107,1368	0/1:26,1:22:4.95:5,0,86	0/1:37,0:32:58.20:230,0,58	1/1:20,0:18:12.21:112,12,0	0/1:11,0:11:39.14:39,0,42
chr10	5817973	.	A	AGTGT	2802.07	PASS	AB=0.969;AC=24;AF=0.429;AN=56;BaseQRankSum=4.357;DP=962;FS=45.554;HRun=0;HaplotypeScore=250.8364;InbreedingCoeff=0.0415;MQ=37.70;MQ0=19;MQRankSum=-5.354;QD=4.77;ReadPosRankSum=-4.781;VQSLOD=0.1781;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:21:2.04:0,2,6	0/1:14,0:14:12.45:12,0,235	0/0:16,0:4:12.04:0,12,214	0/0:31,0:8:20.34:0,20,324	0/1:32,0:31:9.55:10,0,281	1/1:22,2:21:5.37:50,5,0	1/1:30,0:21:11.98:167,12,0	1/1:37,0:28:58.71:1052,59,0	0/1:47,3:45:49.68:284,0,50	0/0:36,0:34:57.38:0,57,1207	0/0:21,0:21:18.04:0,18,261	0/0:44,0:43:27.56:0,28,1039	0/0:31,0:30:6.34:0,6,804	0/0:45,0:43:29.86:0,30,828	1/1:33,0:27:8.56:43,9,0	0/1:31,0:25:27.54:28,0,38	0/1:35,0:33:27.07:27,0,254	0/1:24,0:24:62.16:62,0,547	0/1:18,0:14:57.78:58,0,144	1/1:34,0:29:3.82:24,4,0	0/0:97,0:91:52.60:0,53,1519	1/1:52,1:48:4.68:20,5,0	0/0:29,0:29:2.51:0,3,244	0/1:57,0:54:32.58:33,0,968	0/1:39,0:33:0.39:10,0,0	0/1:37,6:35:28.23:696,0,28	0/1:24,1:22:22.05:254,0,22	0/1:7,1:8:14.59:145,0,15
chr10	5817977	.	TGA	T	2767.46	PASS	AB=0.851;AC=23;AF=0.411;AN=56;BaseQRankSum=1.712;DP=954;FS=8.630;HRun=0;HaplotypeScore=218.7850;InbreedingCoeff=-0.1974;MQ=36.80;MQ0=21;MQRankSum=-6.067;QD=4.12;ReadPosRankSum=-5.691;VQSLOD=0.4206;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:19,4:21:5.55:0,6,77	0/1:10,4:14:22.07:22,0,273	0/0:15,0:4:12.04:0,12,218	0/0:27,1:8:21:0,21,347	0/1:23,8:30:99:131,0,284	0/0:23,2:22:0.21:0,0,40	1/1:34,2:22:7.35:79,7,0	1/1:14,28:30:71.93:806,72,0	0/1:39,10:44:59.64:60,0,191	0/1:33,4:35:50.15:50,0,1227	0/1:17,4:21:25.87:26,0,246	0/1:40,4:43:99:124,0,1120	0/1:23,6:28:0.44:0,0,836	0/1:34,10:42:78.92:79,0,845	0/0:31,3:27:8.99:0,9,131	0/0:26,4:23:5.84:0,6,75	0/1:28,3:29:39.88:40,0,454	0/1:19,4:22:72.90:73,0,554	0/1:17,1:13:56.49:56,0,106	0/0:28,8:31:6.41:0,6,100	0/1:91,7:88:10.19:10,0,1547	0/0:49,5:49:5.65:0,6,94	0/1:21,6:27:45.09:45,0,249	0/1:48,6:51:99:140,0,985	0/0:33,5:32:4.58:0,5,46	0/1:21,17:29:16.28:693,0,16	1/1:9,16:23:10.35:313,10,0	1/1:4,5:9:17.90:184,18,0
chr10	5817979	.	AGTGTGAGT	A	276.27	PASS	AB=0.964;AC=9;AF=0.161;AN=56;BaseQRankSum=6.575;DP=968;FS=0.659;HRun=0;HaplotypeScore=274.7870;InbreedingCoeff=-0.0598;MQ=36.45;MQ0=24;MQRankSum=-6.728;QD=0.97;ReadPosRankSum=1.301;VQSLOD=1.7396;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:23:3.26:0,3,9	0/0:14,0:14:21.41:0,21,435	0/0:15,0:4:11.99:0,12,148	0/0:28,0:8:20.98:0,21,321	0/0:31,0:30:27.04:0,27,414	0/0:24,2:23:5.78:0,6,60	1/1:38,0:23:4.19:50,4,0	0/1:43,0:29:29.51:30,0,156	0/1:46,4:45:99:104,0,261	0/0:35,0:34:81.16:0,81,1376	0/0:18,0:18:15.04:0,15,246	0/0:46,0:45:81.80:0,82,1384	0/0:30,0:29:66.13:0,66,970	0/0:39,0:40:61.49:0,61,925	0/0:35,2:28:9.50:0,10,188	0/0:28,3:24:1.94:0,2,65	0/1:26,0:26:51.67:52,0,176	0/0:23,0:22:3.45:0,3,636	0/1:19,1:14:61.12:61,0,62	0/1:33,6:33:6.86:7,0,149	0/0:97,0:90:99:0,99,2090	0/0:48,7:50:5.98:0,6,88	0/0:26,0:27:23.80:0,24,374	0/0:49,0:48:75.60:0,76,1405	0/0:35,2:31:3.04:0,3,69	0/1:42,0:33:26.84:27,0,356	0/1:26,0:23:51.36:79,0,51	0/0:9,0:9:4.08:0,4,38
chr10	5817987	.	T	TGA	448.78	PASS	AB=0.949;AC=5;AF=0.089;AN=56;BaseQRankSum=5.013;DP=1020;FS=7.603;HRun=0;HaplotypeScore=243.7199;InbreedingCoeff=0.2295;MQ=36.17;MQ0=34;MQRankSum=-1.871;QD=3.10;ReadPosRankSum=1.473;VQSLOD=1.0706;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:23,3:24:5.98:104,6,0	0/0:16,0:15:23.54:0,24,340	0/0:12,0:3:8.99:0,9,108	0/0:26,0:8:17.68:0,18,227	0/0:31,0:30:28.19:0,28,352	0/0:27,0:23:5.50:0,5,65	0/1:43,0:26:4.30:48,0,4	0/1:48,0:30:39.77:40,0,327	0/0:52,0:46:34.88:0,35,356	0/0:36,0:34:89.46:0,89,1130	0/0:19,0:18:17.82:0,18,230	0/0:48,0:47:96.03:0,96,1297	0/0:30,0:29:68:0,68,881	0/0:44,0:42:65.31:0,65,782	0/0:44,0:33:8.55:0,9,129	0/0:34,0:26:14.04:0,14,151	0/1:23,5:26:24.20:371,0,24	0/0:23,0:22:57.59:0,58,651	0/0:25,0:15:32.60:0,33,359	0/0:40,0:34:7.65:0,8,104	0/0:106,0:92:99:0,118,1671	0/0:59,0:52:5.03:0,5,85	0/0:28,0:28:29.51:0,30,364	0/0:52,0:49:70.34:0,70,995	0/0:36,0:30:2.72:0,3,43	0/0:48,0:38:15.36:0,15,532	0/0:24,0:21:3.95:0,4,122	0/0:15,0:15:16.46:0,16,164
chr10	5817989	.	T	TGA	347.35	PASS	AB=0.991;AC=9;AF=0.161;AN=56;BaseQRankSum=6.330;DP=1029;FS=0.000;HRun=0;HaplotypeScore=244.6015;InbreedingCoeff=0.2496;MQ=36.30;MQ0=37;MQRankSum=-5.922;QD=1.25;ReadPosRankSum=0.310;VQSLOD=2.3597;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:24:8.42:42,8,0	0/0:17,0:16:27.54:0,28,370	0/0:11,0:2:3.01:0,3,46	0/0:25,0:7:12.87:0,13,211	0/0:32,0:31:33.07:0,33,438	0/0:27,1:23:4.70:0,5,50	0/1:42,1:26:2.13:95,0,2	0/1:44,0:26:86.58:87,0,375	0/1:51,0:45:24.84:25,0,351	0/0:36,0:34:86.53:0,87,1128	0/0:20,0:19:20.81:0,21,257	0/0:48,0:47:99:0,101,1413	0/0:30,0:29:69.10:0,69,889	0/0:45,0:43:60.27:0,60,806	0/0:44,0:34:8.54:0,9,129	0/1:34,0:26:0.90:1,0,102	1/1:28,0:26:7.39:221,7,0	0/0:22,0:21:55.40:0,55,658	0/0:25,1:15:0.29:0,0,348	0/0:41,0:35:6.32:0,6,114	0/0:110,0:95:99:0,113,1664	0/0:57,1:51:5.07:0,5,85	0/0:29,0:29:29.51:0,30,380	0/0:55,0:52:79.69:0,80,1114	0/0:35,1:30:2.72:0,3,43	0/1:51,0:41:9.30:9,0,582	0/0:23,0:20:11.77:0,12,117	0/0:14,0:14:12.24:0,12,188
chr10	5817999	.	T	TGA	461.37	PASS	AB=0.986;AC=7;AF=0.125;AN=56;BaseQRankSum=5.762;DP=1039;FS=0.701;HRun=0;HaplotypeScore=236.6546;InbreedingCoeff=0.0610;MQ=36.22;MQ0=51;MQRankSum=-5.674;QD=2.16;ReadPosRankSum=1.512;VQSLOD=2.1090;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:24:4.79:28,5,0	0/0:20,0:19:37.78:0,38,495	0/0:5,0:1:2.97:0,3,20	0/0:16,0:3:5.98:0,6,64	0/0:31,0:30:30.08:0,30,436	0/0:31,0:26:5.47:0,5,85	0/1:41,0:24:5.91:6,0,10	0/1:42,0:19:47.65:48,0,262	0/0:54,0:48:51:0,51,643	0/0:36,0:34:87.23:0,87,1205	0/0:22,0:21:26.86:0,27,400	0/0:45,0:44:97.73:0,98,1435	0/0:30,0:29:62.80:0,63,853	0/0:46,0:44:72.27:0,72,1022	0/0:48,0:36:8.53:0,9,137	0/0:38,0:30:20.02:0,20,313	0/1:26,0:23:40.07:40,0,184	0/0:25,0:24:61.20:0,61,753	0/0:28,0:15:42.07:0,42,530	0/0:42,0:36:4.30:0,4,91	0/0:103,1:89:99:0,111,1556	0/0:61,0:52:7.99:0,8,135	0/0:32,0:32:41.77:0,42,576	0/0:57,0:54:87.60:0,88,1267	0/0:42,0:35:2.70:0,3,46	0/1:50,4:41:99:415,0,448	0/1:23,0:21:47.62:48,0,201	0/0:12,0:12:16.01:0,16,184
chr10	5818029	.	TGA	T	311.49	PASS	AB=0.880;AC=4;AF=0.077;AN=52;BaseQRankSum=6.515;DP=1065;FS=3.403;HRun=0;HaplotypeScore=248.4579;InbreedingCoeff=-0.1030;MQ=38.67;MQ0=61;MQRankSum=-7.502;QD=2.55;ReadPosRankSum=-1.399;VQSLOD=2.1866;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:36:5.79:0,6,116	0/0:16,0:16:31.16:0,31,681	./.	./.	0/0:32,0:31:56.21:0,56,986	0/0:30,0:26:7.02:0,7,118	0/1:33,0:18:4.22:4,0,118	0/0:34,0:11:18.97:0,19,219	0/0:59,0:52:52.03:0,52,727	0/0:43,0:44:99:0,126,2220	0/0:25,0:24:51.16:0,51,941	0/0:42,0:41:62.89:0,63,1400	0/0:43,0:42:85.93:0,86,1688	0/0:51,0:50:97.67:0,98,1682	0/0:40,0:33:11.48:0,11,188	0/0:40,0:33:25.72:0,26,380	0/0:24,0:21:7.25:0,7,469	0/0:30,0:30:60.55:0,61,1093	0/0:38,0:16:41.54:0,42,558	0/0:38,0:33:14.18:0,14,159	0/0:113,0:102:99:0,162,2663	0/0:56,0:49:8.34:0,8,117	0/0:38,0:38:75.02:0,75,1291	0/0:52,0:50:80.76:0,81,1306	0/0:33,0:29:2.64:0,3,58	0/1:50,4:46:99:190,0,897	0/1:12,8:19:99:186,0,177	0/1:12,2:14:32.47:32,0,120
chr10	5818052	.	GTA	G	1005.47	PASS	AB=0.747;AC=17;AF=0.304;AN=56;BaseQRankSum=7.609;DP=942;FS=13.006;HRun=0;HaplotypeScore=186.3478;InbreedingCoeff=0.5624;MQ=44.72;MQ0=37;MQRankSum=-7.629;QD=3.68;ReadPosRankSum=-3.329;VQSLOD=0.7503;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,2:30:5.79:0,6,116	0/0:17,0:17:48.15:0,48,861	0/0:19,0:4:9.03:0,9,174	0/0:34,0:6:8.84:0,9,170	0/0:26,0:26:60.46:0,60,1277	1/1:4,19:20:2.82:18,3,0	1/1:15,4:14:8.95:113,9,0	0/1:13,2:5:60.89:89,0,61	1/1:11,31:36:30.43:370,30,0	0/0:55,0:54:99:0,148,2620	0/0:22,0:22:63.22:0,63,1208	0/0:40,0:40:99:0,107,1930	0/0:42,0:42:99:0,123,2269	0/0:49,0:49:99:0,114,2081	1/1:5,26:24:4.01:48,4,0	1/1:5,21:22:18.13:243,18,0	0/0:17,1:16:25.26:0,25,630	0/0:31,1:32:88.70:0,89,1469	0/1:12,5:11:99:226,0,152	1/1:10,12:21:5.61:55,6,0	0/0:130,4:128:99:0,241,4253	0/1:17,25:38:0.25:0,0,0	0/0:34,0:34:93.29:0,93,1714	0/0:50,2:52:99:0,114,2116	0/1:6,17:22:0.17:0,0,0	0/0:48,1:45:54.11:0,54,1654	0/0:16,0:15:15.91:0,16,310	0/1:10,1:11:12.41:12,0,279
chr10	5818054	.	A	ATGTG	177.59	PASS	AB=1.000;AC=12;AF=0.214;AN=56;BaseQRankSum=7.077;DP=928;FS=2.970;HRun=0;HaplotypeScore=211.2159;InbreedingCoeff=0.3048;MQ=45.24;MQ0=37;MQRankSum=-6.202;QD=0.78;ReadPosRankSum=-3.259;VQSLOD=2.2491;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:6:0,6,81	0/0:18,0:18:45.15:0,45,819	0/0:20,0:5:10.87:0,11,213	0/0:34,0:6:10.48:0,10,170	0/0:26,0:26:60.06:0,60,1207	1/1:22,0:20:0.88:2,1,0	0/1:17,0:11:15.69:16,0,36	0/0:13,0:5:6.28:0,6,50	0/1:39,0:33:47.45:109,0,47	0/0:53,0:52:99:0,138,2338	0/0:21,0:21:63.22:0,63,1172	0/0:41,0:41:99:0,105,1808	0/0:43,0:43:99:0,126,2196	0/0:52,0:52:89.11:0,89,1940	1/1:31,0:24:4.25:68,4,0	0/1:24,0:20:66.71:67,0,76	0/0:19,0:17:29.44:0,29,511	0/0:32,0:32:61.58:0,62,1347	0/1:14,0:11:16.63:17,0,180	1/1:22,1:22:2.85:27,3,0	0/0:133,2:129:99:0,235,4104	0/1:35,0:31:0.26:0,0,0	0/0:35,0:35:93.27:0,93,1631	0/0:52,1:53:99:0,117,1989	0/1:22,0:21:0.03:0,0,0	0/0:49,0:45:99:0,116,1681	0/0:15,0:14:14.80:0,15,301	0/0:11,0:11:17.40:0,17,305
chr10	5818077	.	TGA	T	979.37	PASS	AB=0.750;AC=25;AF=0.446;AN=56;BaseQRankSum=10.801;DP=884;FS=16.489;HRun=0;HaplotypeScore=161.6411;InbreedingCoeff=0.6098;MQ=47.62;MQ0=17;MQRankSum=-10.539;QD=3.61;ReadPosRankSum=-3.656;VQSLOD=0.8311;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:19,3:22:2.47:41,2,0	0/0:17,0:17:47.50:0,48,770	0/0:31,0:7:17.93:0,18,201	0/0:51,0:11:18.72:0,19,152	0/0:30,0:30:83.80:0,84,1250	0/1:8,9:16:0:0,0,0	1/1:11,1:9:2.87:27,3,0	1/1:4,0:2:4.25:33,4,0	1/1:4,20:22:18.70:180,19,0	0/0:47,1:47:88.46:0,88,1991	0/0:23,0:23:69.08:0,69,1057	0/0:44,0:44:99:0,115,1837	0/0:48,0:48:99:0,129,2065	0/0:58,0:58:99:0,153,2505	1/1:13,8:18:2.84:15,3,0	1/1:8,8:16:11.49:118,11,0	1/1:16,3:18:5.87:133,6,0	0/0:28,0:28:78.20:0,78,1303	1/1:9,2:6:11.20:83,11,0	1/1:10,7:18:0.16:16,0,0	0/0:140,7:143:99:0,283,4563	0/1:19,14:32:0.04:1,0,0	0/0:34,0:34:96.23:0,96,1512	0/0:51,3:53:99:0,123,2007	0/1:7,12:18:0.02:0,0,0	0/1:29,10:37:99:400,0,103	1/1:5,2:7:8.01:100,8,0	0/1:7,0:7:10.49:10,0,20
chr10	5818091	.	AGT	A	136.87	PASS	AB=0.737;AC=12;AF=0.214;AN=56;BaseQRankSum=7.099;DP=850;FS=9.033;HRun=0;HaplotypeScore=173.7182;InbreedingCoeff=0.3586;MQ=49.27;MQ0=16;MQRankSum=-6.130;QD=0.82;ReadPosRankSum=-3.222;VQSLOD=0.8150;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,3:22:2.95:0,3,23	0/0:15,0:15:39.60:0,40,655	0/0:29,0:7:2.99:0,3,160	0/0:54,0:16:22.18:0,22,333	0/0:30,0:30:78.24:0,78,1311	0/1:5,9:14:0:1,0,0	1/1:11,2:8:2.34:11,2,0	0/0:3,0:2:2.97:0,3,20	0/1:9,17:26:36.30:74,0,36	0/0:56,0:56:99:0,159,2587	0/0:24,0:23:63.22:0,63,1100	0/0:40,0:40:99:0,114,2001	0/0:44,0:44:99:0,118,2025	0/0:55,0:54:99:0,141,2392	1/1:7,9:14:2.77:32,3,0	1/1:6,6:12:8.51:92,9,0	0/1:16,1:16:12.93:13,0,162	0/0:28,0:28:75.21:0,75,1270	0/1:13,2:7:42.78:43,0,57	0/0:7,9:16:3.35:0,3,25	0/0:131,8:136:99:0,288,4928	0/1:17,13:30:0.08:1,0,0	0/0:33,0:33:93.26:0,93,1513	0/0:47,3:49:99:0,114,1963	0/1:8,11:19:0.17:0,0,0	0/0:29,0:28:52.09:0,52,559	0/0:9,0:9:10:0,10,56	0/0:7,0:7:14.88:0,15,133
chr10	5818101	.	TGTGA	T	564.99	PASS	AB=0.977;AC=19;AF=0.352;AN=54;BaseQRankSum=8.817;DP=832;FS=7.481;HRun=0;HaplotypeScore=197.8004;InbreedingCoeff=0.3919;MQ=49.70;MQ0=16;MQRankSum=-7.893;QD=2.67;ReadPosRankSum=-4.456;VQSLOD=0.5618;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:21,1:22:1.11:8,1,0	0/0:17,0:17:31.68:0,32,1083	0/0:32,0:8:21.96:0,22,463	0/0:51,0:20:37.66:0,38,670	0/0:27,0:27:69.20:0,69,1775	1/1:18,0:18:1.65:7,2,0	0/1:15,0:8:0.11:0,0,1	./.	0/1:23,0:22:6.08:163,0,6	0/0:58,0:58:99:0,158,3656	0/0:26,0:25:65.70:0,66,1610	0/0:41,0:41:99:0,117,3080	0/0:44,0:44:99:0,117,2570	0/0:50,0:49:99:0,120,3056	1/1:15,0:14:2.59:41,3,0	1/1:11,0:10:5.51:76,6,0	0/1:16,1:17:81.60:101,0,82	0/0:28,0:28:78.18:0,78,1702	0/1:13,0:8:24.06:24,0,61	0/1:18,0:18:0.54:1,0,2	0/0:146,1:144:99:0,314,7454	0/1:32,0:31:0:2,0,0	0/0:30,0:30:84.27:0,84,2091	0/0:49,0:48:99:0,117,2971	0/0:19,0:18:0.40:0,0,1	0/1:15,2:16:99:170,0,105	1/1:4,0:4:5.65:31,6,0	1/1:5,2:7:1.07:86,1,0
chr10	5818103	.	TGA	T	608.72	PASS	AB=0.830;AC=20;AF=0.370;AN=54;BaseQRankSum=9.176;DP=833;FS=15.628;HRun=0;HaplotypeScore=175.7225;InbreedingCoeff=0.4611;MQ=49.85;MQ0=15;MQRankSum=-6.491;QD=2.62;ReadPosRankSum=-5.688;VQSLOD=-0.5801;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:21,1:22:0.72:1,0,1	0/0:17,0:17:31.74:0,32,805	0/0:31,0:8:23.77:0,24,338	0/0:51,0:21:32.36:0,32,503	0/0:29,0:29:75.06:0,75,1326	1/1:10,9:19:8.63:88,9,0	0/1:8,8:8:0.05:0,0,0	./.	1/1:4,21:24:6.38:187,6,0	0/0:56,0:56:99:0,142,2687	0/0:26,0:25:68.75:0,69,1202	0/0:42,0:42:99:0,120,2247	0/0:45,0:45:99:0,120,1958	0/0:49,0:48:99:0,120,2181	1/1:7,6:12:2.58:40,3,0	1/1:6,6:11:8.51:112,9,0	0/1:18,1:19:51.93:72,0,52	0/0:28,0:28:81.05:0,81,1287	0/1:10,2:7:25.18:69,0,25	1/1:7,11:18:5.61:70,6,0	0/0:148,0:145:99:0,322,5495	0/1:15,16:30:0.19:0,0,0	0/0:29,0:29:84.26:0,84,1542	0/0:49,0:48:99:0,120,2158	0/1:7,12:18:0.34:0,0,0	0/1:14,1:14:66.62:67,0,96	1/1:5,0:5:6.73:36,7,0	0/1:6,0:6:19.19:28,0,19
chr10	5818105	.	A	AGT	724.26	PASS	AB=0.865;AC=21;AF=0.389;AN=54;BaseQRankSum=9.240;DP=834;FS=7.160;HRun=0;HaplotypeScore=183.3651;InbreedingCoeff=0.6187;MQ=49.74;MQ0=15;MQRankSum=-8.174;QD=3.28;ReadPosRankSum=-2.526;VQSLOD=1.1744;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:13,4:23:3.22:30,3,0	0/0:18,0:18:46.44:0,46,559	0/0:30,0:8:17.87:0,18,232	0/0:52,0:22:32.20:0,32,367	0/0:28,0:28:72.20:0,72,937	0/0:15,0:18:2.01:0,2,5	0/1:16,0:8:0.06:0,0,0	./.	1/1:24,0:25:11.12:117,11,0	0/0:54,0:54:99:0,140,1775	0/0:26,0:25:68.66:0,69,860	0/0:42,0:42:99:0,123,1591	0/0:43,0:43:96.15:0,96,1187	0/0:49,0:48:99:0,108,1432	1/1:10,0:12:2.80:25,3,0	1/1:12,0:13:5.80:34,6,0	1/1:10,6:18:23.74:266,24,0	0/0:28,0:28:63.10:0,63,795	0/1:12,0:9:6.70:49,0,7	0/1:18,0:20:0.66:1,0,1	0/0:136,8:141:99:0,292,3776	0/1:20,0:29:0:0,0,2	0/0:29,0:29:81.23:0,81,1032	0/0:46,3:48:99:0,120,1529	1/1:14,0:17:0.29:1,0,0	0/1:11,4:14:22.37:164,0,22	1/1:5,3:8:8.99:112,9,0	1/1:4,2:6:8.84:91,9,0
chr10	5818113	.	A	AGT	236.03	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=8.119;DP=837;FS=5.126;HRun=0;HaplotypeScore=181.7523;InbreedingCoeff=0.4707;MQ=49.77;MQ0=22;MQRankSum=-7.018;QD=1.45;ReadPosRankSum=-2.539;VQSLOD=1.8832;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:20:0.68:1,1,0	0/0:18,0:18:50.58:0,51,594	0/0:30,0:8:18.95:0,19,245	0/0:53,0:23:41.45:0,41,508	0/0:27,0:27:66.13:0,66,849	0/0:22,0:22:20.98:0,21,216	0/1:19,0:9:0.02:0,0,0	1/1:3,0:2:5.34:23,5,0	0/1:28,0:27:2.18:2,0,138	0/0:57,0:57:99:0,156,1929	0/0:31,0:30:75.21:0,75,975	0/0:46,0:46:99:0,126,1695	0/0:37,0:37:84.17:0,84,1152	0/0:46,0:45:99:0,104,1404	0/0:15,0:14:0.27:0,0,1	0/0:14,0:13:7.61:0,8,123	0/1:16,0:16:34.22:175,0,34	0/0:24,0:24:63.17:0,63,838	0/0:12,0:8:14.61:0,15,121	0/0:22,0:22:18.47:0,18,213	0/0:133,8:138:99:0,299,3969	0/1:32,0:31:6.96:7,0,97	0/0:28,0:28:75.22:0,75,996	0/0:48,3:50:99:0,120,1574	1/1:19,0:18:2.96:11,3,0	0/1:12,0:11:20.99:78,0,21	1/1:9,0:9:11.22:52,11,0	1/1:5,0:5:5.67:28,6,0
chr10	5818117	.	TGAGA	T	45.93	PASS	AB=0.972;AC=6;AF=0.107;AN=56;BaseQRankSum=6.472;DP=838;FS=0.000;HRun=0;HaplotypeScore=205.7968;InbreedingCoeff=0.3487;MQ=50.01;MQ0=20;MQRankSum=-5.696;QD=0.78;ReadPosRankSum=-3.394;VQSLOD=1.7032;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:16,4:20:1.65:33,2,0	0/0:18,0:18:54.18:0,54,1360	0/0:28,0:8:13.94:0,14,502	0/0:51,0:25:49.80:0,50,1143	0/0:27,0:27:68:0,68,1786	0/0:23,0:23:20.32:0,20,442	0/0:18,0:10:2.74:0,3,46	0/0:3,0:2:3:0,3,28	0/0:29,0:27:25.06:0,25,522	0/0:54,0:54:99:0,131,3952	0/0:31,0:30:84.29:0,84,2258	0/0:49,0:49:99:0,138,3731	0/0:36,0:36:93.32:0,93,2509	0/0:45,0:44:99:0,105,2881	0/0:16,0:15:5.69:0,6,84	0/0:17,0:16:21.13:0,21,323	0/1:16,1:17:26.27:26,0,212	0/0:22,0:22:63.17:0,63,1656	0/0:12,0:8:23.94:0,24,358	0/0:23,0:23:23.54:0,24,446	0/0:138,0:135:99:0,317,8546	0/0:33,0:32:15.38:0,15,303	0/0:28,0:28:80.30:0,80,2145	0/0:51,0:50:99:0,132,3444	0/0:19,0:18:3.40:0,3,27	0/1:13,0:13:52.04:52,0,152	1/1:9,0:9:10.85:53,11,0	0/0:5,2:7:4.99:0,5,25
chr10	5818121	.	A	AGT	648.46	PASS	AB=0.854;AC=9;AF=0.161;AN=56;BaseQRankSum=7.917;DP=851;FS=2.552;HRun=0;HaplotypeScore=185.6136;InbreedingCoeff=0.4941;MQ=50.17;MQ0=20;MQRankSum=-6.696;QD=8.65;ReadPosRankSum=-3.522;VQSLOD=2.7052;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:18:3.11:16,3,0	0/0:19,0:19:54.13:0,54,722	0/0:28,0:8:15.76:0,16,266	0/0:49,0:24:36.55:0,37,601	0/0:29,0:29:71.89:0,72,928	0/0:24,0:23:20.92:0,21,170	0/0:20,0:11:5.74:0,6,41	0/1:3,1:2:5.67:45,0,6	0/0:26,0:24:32.01:0,32,265	0/0:52,0:52:99:0,147,2020	0/0:31,0:31:84.25:0,84,1172	0/0:48,0:48:99:0,126,1789	0/0:36,0:36:93.24:0,93,1294	0/0:45,0:44:99:0,105,1533	0/0:19,0:16:6.26:0,6,47	0/0:19,0:18:16.45:0,16,119	0/1:19,0:19:32.01:32,0,88	0/0:23,0:23:57.17:0,57,814	0/0:13,0:10:23.03:0,23,182	0/0:23,0:23:20.82:0,21,148	0/0:137,0:135:99:0,310,4409	0/0:32,0:31:18.29:0,18,125	0/0:29,0:29:75.15:0,75,1045	0/0:53,0:52:99:0,132,1763	0/0:20,0:19:2.58:0,3,20	0/1:11,3:16:14.18:277,0,14	1/1:1,9:10:21.04:301,21,0	1/1:5,2:7:8.98:121,9,0
chr10	5818147	.	AGT	A	4887.02	PASS	AB=0.727;AC=27;AF=0.500;AN=54;BaseQRankSum=10.586;DP=914;FS=51.842;HRun=0;HaplotypeScore=178.6218;InbreedingCoeff=0.7489;MQ=47.67;MQ0=28;MQRankSum=-2.702;QD=12.60;ReadPosRankSum=-1.743;VQSLOD=2.7387;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:5,23:27:7.86:32,0,8	0/0:20,0:20:48.14:0,48,759	./.	0/0:27,0:8:8.97:0,9,80	0/0:32,0:31:69.19:0,69,1062	1/1:4,24:26:29.71:375,30,0	1/1:11,18:21:22.93:296,23,0	0/1:26,4:21:99:287,0,137	1/1:2,29:27:33.09:404,33,0	0/0:57,0:55:99:0,107,2137	0/0:34,0:34:99:0,99,1532	0/0:46,0:46:99:0,102,1597	0/0:27,0:27:49.72:0,50,780	0/0:43,0:42:77.91:0,78,1102	1/1:7,21:22:20.28:242,20,0	1/1:3,25:26:41.90:507,42,0	0/1:19,8:25:47.53:343,0,48	0/0:20,0:20:48.16:0,48,762	1/1:13,10:13:13.83:318,14,0	1/1:8,24:32:33.10:414,33,0	0/0:124,0:121:99:0,201,3687	1/1:15,21:36:41.99:525,42,0	0/0:35,0:33:80.99:0,81,1232	0/0:46,0:45:99:0,102,1644	1/1:5,17:21:7.63:144,8,0	1/1:12,13:23:57.02:667,57,0	1/1:1,14:14:21.07:260,21,0	1/1:1,4:5:5.85:73,6,0
chr10	5818812	.	CATATATATATATATATATATATATATATAT	C	2190.31	PASS	AB=1.000;AC=13;AF=0.433;AN=30;BaseQRankSum=3.398;DP=182;FS=7.754;HRun=0;HaplotypeScore=122.9765;InbreedingCoeff=0.6038;MQ=64.75;MQ0=7;MQRankSum=-2.288;QD=28.45;ReadPosRankSum=3.615;VQSLOD=1.8055;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:26:6.02:397,6,0	./.	0/0:7,0:5:2.85:0,3,16	0/0:17,0:5:5.23:0,5,38	./.	1/1:2,9:11:11.54:921,12,0	1/1:9,0:9:3.01:49,3,0	0/0:18,0:17:33.11:0,33,1723	./.	./.	./.	./.	./.	./.	./.	1/1:2,4:6:9.03:692,9,0	0/0:9,0:9:9.50:0,10,942	0/0:7,0:7:12.51:0,13,978	0/1:11,0:11:0:0,0,0	1/1:4,0:4:2.97:20,3,0	./.	./.	./.	./.	1/1:8,2:10:3.01:231,3,0	0/0:4,0:4:3.01:0,3,141	0/0:4,0:7:15.05:0,15,1026	0/0:3,0:4:9.03:0,9,912
chr10	5819511	.	C	CTG	5189.99	PASS	AB=0.973;AC=37;AF=0.740;AN=50;BaseQRankSum=-4.111;DP=680;FS=38.661;HRun=0;HaplotypeScore=130.6348;InbreedingCoeff=0.1120;MQ=40.34;MQ0=34;MQRankSum=2.352;QD=8.80;ReadPosRankSum=0.837;VQSLOD=2.3054;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:44,0:38:17.52:83,0,18	1/1:6,0:6:5.57:31,6,0	./.	0/0:14,0:1:2.88:0,3,15	1/1:15,0:15:19.07:248,19,0	./.	0/0:24,3:22:4.33:0,4,41	1/1:31,0:20:33.88:400,34,0	0/1:16,2:15:12.83:13,0,18	0/1:26,0:25:49.84:330,0,50	1/1:21,1:20:25.43:331,25,0	1/1:22,0:21:30.65:260,31,0	1/1:17,1:16:10.75:246,11,0	0/1:26,0:23:2.50:129,0,3	1/1:14,2:14:0.47:1,0,0	./.	1/1:26,0:20:7.44:54,7,0	1/1:40,0:36:12.11:551,12,0	1/1:22,1:11:7.41:117,7,0	0/0:13,2:15:0:0,0,0	1/1:93,0:81:98.07:1082,98,0	1/1:14,2:15:4.94:22,5,0	0/1:19,0:19:43.95:89,0,44	1/1:56,1:56:89.13:851,89,0	1/1:14,2:15:0.47:1,0,0	0/1:29,3:30:0.88:233,0,1	0/1:17,0:17:20.34:27,0,20	1/1:6,0:6:9.45:91,9,0
chr10	5819557	.	CTGTG	C	617.10	PASS	AB=0.976;AC=19;AF=0.352;AN=54;BaseQRankSum=5.589;DP=820;FS=4.527;HRun=0;HaplotypeScore=146.7936;InbreedingCoeff=0.4747;MQ=36.22;MQ0=56;MQRankSum=-7.776;QD=2.19;ReadPosRankSum=-4.226;VQSLOD=0.7995;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:41:2.37:0,2,190	0/0:4,0:5:9.03:0,9,226	0/0:6,0:1:2.98:0,3,21	0/0:10,0:1:2.97:0,3,20	0/0:25,0:19:24.08:0,24,462	1/1:26,1:24:2.11:7,2,0	1/1:37,0:28:6.01:65,6,0	1/1:30,11:17:26.05:274,26,0	0/1:22,0:18:22.55:60,0,23	0/0:32,1:28:63.09:0,63,1319	0/0:28,0:28:63.67:0,64,1399	0/0:26,0:26:27.09:0,27,611	0/0:18,0:14:29.38:0,29,576	0/0:30,0:24:38.89:0,39,874	./.	0/0:11,1:9:5.30:0,5,71	0/0:29,0:23:24.91:0,25,448	0/0:42,0:38:54.12:0,54,1291	0/1:17,0:10:14.92:24,0,15	1/1:27,0:25:2.94:18,3,0	0/0:118,0:98:99:0,141,3025	1/1:27,0:22:0.89:2,1,0	0/0:15,0:15:8.88:0,9,174	0/0:52,0:50:84.24:0,84,1735	1/1:27,0:21:0.47:1,0,0	1/1:29,0:24:17.41:224,17,0	1/1:15,0:14:6.29:51,6,0	0/1:12,1:13:48.46:51,0,48
chr10	5819567	.	G	GTGTC	1160.01	PASS	AB=0.952;AC=15;AF=0.268;AN=56;BaseQRankSum=5.512;DP=855;FS=24.936;HRun=0;HaplotypeScore=155.3725;InbreedingCoeff=0.1896;MQ=35.77;MQ0=67;MQRankSum=-7.080;QD=3.95;ReadPosRankSum=-3.181;VQSLOD=0.5731;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:46:10.96:0,11,165	0/0:10,0:8:12.01:0,12,192	0/0:4,0:1:3.01:0,3,47	0/0:7,0:1:3.01:0,3,41	0/0:28,0:22:27.08:0,27,474	1/1:27,1:25:1.63:10,2,0	0/1:39,1:31:8.85:93,0,9	1/1:47,0:17:20.39:381,20,0	0/1:25,0:19:8.34:72,0,8	0/0:35,0:29:66.12:0,66,1149	0/0:29,0:29:70.73:0,71,1198	0/0:26,0:24:30.02:0,30,532	0/0:17,0:13:30.51:0,31,504	0/0:31,0:25:47.80:0,48,786	0/0:31,0:25:0.39:0,0,1	0/1:13,0:10:42.88:43,0,48	0/0:33,0:26:37.69:0,38,460	0/0:44,0:39:74.30:0,74,1142	0/1:20,0:13:55.47:62,0,55	1/1:31,1:30:2.72:18,3,0	0/0:121,0:97:99:0,154,2639	0/0:25,0:21:1.25:0,1,3	0/0:15,0:14:12:0,12,161	0/0:49,0:47:93.11:0,93,1499	1/1:28,0:22:0.47:1,0,0	0/1:28,1:23:12.61:438,0,13	0/1:15,2:16:26.26:90,0,26	0/1:12,0:14:40.43:100,0,40
chr10	5819569	.	G	GTC	652.39	PASS	AB=0.907;AC=13;AF=0.232;AN=56;BaseQRankSum=6.706;DP=850;FS=24.044;HRun=0;HaplotypeScore=144.3947;InbreedingCoeff=0.0986;MQ=35.65;MQ0=68;MQRankSum=-7.211;QD=2.20;ReadPosRankSum=-1.507;VQSLOD=0.6658;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:44:12.32:0,12,154	0/0:10,0:8:14.95:0,15,176	0/0:4,0:1:3.01:0,3,43	0/0:7,0:1:3.01:0,3,42	0/0:28,0:22:27.07:0,27,390	1/1:25,3:25:1.12:9,1,0	0/1:37,2:30:9.11:65,0,9	0/1:49,0:17:5.29:146,0,5	0/1:26,0:20:43.49:43,0,46	0/0:34,0:29:68.63:0,69,967	0/0:29,0:29:69.05:0,69,996	0/0:25,0:23:30.09:0,30,434	0/0:17,0:13:30.06:0,30,424	0/0:32,0:26:46.36:0,46,643	0/1:26,5:25:0.01:0,0,0	0/1:13,0:10:3.17:3,0,37	0/0:32,0:25:20.97:0,21,355	0/0:43,0:38:77.37:0,77,976	0/1:22,0:13:56.15:56,0,77	1/1:28,2:28:2.05:17,2,0	0/0:121,0:98:99:0,153,2214	0/0:22,2:20:0:0,0,0	0/0:15,0:14:14.98:0,15,160	0/0:50,0:48:93.15:0,93,1279	0/0:28,0:22:0:0,0,0	0/1:21,7:23:12.60:284,0,13	0/1:11,5:15:26.16:76,0,26	0/1:11,4:15:25.34:86,0,25
chr10	5819575	.	CTG	C	87.61	PASS	AB=0.943;AC=10;AF=0.192;AN=52;BaseQRankSum=3.779;DP=839;FS=12.887;HRun=0;HaplotypeScore=137.6087;InbreedingCoeff=0.1555;MQ=35.83;MQ0=65;MQRankSum=-4.672;QD=0.42;ReadPosRankSum=-1.663;VQSLOD=1.8663;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:44:6.46:0,6,92	0/0:11,0:9:17.77:0,18,219	./.	./.	0/0:25,0:19:15.04:0,15,211	1/1:25,3:25:2.97:28,3,0	0/0:36,3:32:0.28:0,0,31	0/1:49,1:16:46.70:50,0,47	0/1:23,3:20:1.19:1,0,68	0/0:32,0:27:19.53:0,20,706	0/0:30,0:30:22.85:0,23,824	0/0:26,0:24:30.09:0,30,458	0/0:21,0:16:39.52:0,40,425	0/0:30,0:26:44.47:0,44,546	0/0:29,2:25:0:0,0,0	0/0:9,3:9:6.46:0,6,62	0/0:28,1:23:18.85:0,19,145	0/0:42,0:37:60.04:0,60,816	0/1:19,1:13:5.68:6,0,153	0/0:23,5:26:1.82:0,2,5	0/0:128,3:105:88.58:0,89,1734	0/0:23,1:20:1.25:0,1,3	0/0:13,0:12:11.97:0,12,161	0/0:46,0:44:31.76:0,32,1005	1/1:26,2:22:0.47:1,0,0	0/1:27,0:22:52.04:85,0,52	0/1:15,1:15:3.73:19,0,4	0/1:14,2:15:13.58:14,0,46
chr10	5819591	.	CTG	C	107.16	PASS	AB=0.928;AC=12;AF=0.240;AN=50;BaseQRankSum=4.145;DP=801;FS=0.877;HRun=0;HaplotypeScore=137.0495;InbreedingCoeff=0.1857;MQ=35.43;MQ0=66;MQRankSum=-2.138;QD=0.48;ReadPosRankSum=-0.205;VQSLOD=2.0451;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,1:39:3.01:0,3,47	0/0:10,0:8:18.06:0,18,273	./.	./.	0/0:25,0:19:24.55:0,25,352	1/1:22,2:21:2.99:29,3,0	0/0:32,3:28:3.01:0,3,36	0/1:40,1:12:2.18:43,0,2	0/1:21,4:18:12.40:12,0,27	0/0:31,0:26:53.32:0,53,617	0/0:29,0:29:41.79:0,42,538	0/0:25,1:24:27.09:0,27,419	0/0:25,0:21:37.13:0,37,490	0/0:31,0:27:8.46:0,8,646	0/0:29,2:25:2.18:0,2,7	0/0:9,2:7:4.88:0,5,21	0/1:20,4:18:18.88:59,0,19	0/0:31,2:27:51.22:0,51,710	1/1:19,1:13:5.19:45,5,0	0/0:22,10:30:1.82:0,2,6	0/0:121,3:95:13.27:0,13,1642	./.	0/0:14,0:13:18.42:0,18,266	0/0:40,0:38:59.50:0,60,836	1/1:25,5:23:0.47:1,0,0	0/1:21,0:17:2:2,0,34	0/1:15,1:15:16.58:36,0,17	0/1:20,0:18:7.44:7,0,80
chr10	5819605	.	GTC	G	410.34	PASS	AB=0.966;AC=16;AF=0.320;AN=50;BaseQRankSum=7.164;DP=758;FS=7.349;HRun=0;HaplotypeScore=118.3456;InbreedingCoeff=0.2661;MQ=36.29;MQ0=53;MQRankSum=-5.850;QD=1.70;ReadPosRankSum=-1.536;VQSLOD=1.4760;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,2:28:5.61:0,6,67	0/0:13,0:11:23.60:0,24,302	./.	0/0:18,0:2:3.01:0,3,52	0/0:26,0:21:11.34:0,11,393	1/1:20,0:18:2.12:14,2,0	0/0:34,0:26:2.81:0,3,18	1/1:34,0:11:1.39:73,1,0	0/1:28,0:20:6.44:6,0,27	0/0:29,0:25:14.75:0,15,603	0/0:21,0:21:45.04:0,45,615	0/0:26,0:24:29.69:0,30,410	0/0:22,0:20:34.13:0,34,594	0/0:33,0:29:3.31:0,3,626	1/1:26,0:20:1.10:15,1,0	0/1:10,0:7:5.04:5,0,12	0/1:21,1:17:5.45:34,0,5	0/0:31,0:25:9.35:0,9,622	1/1:16,0:14:6.36:97,6,0	1/1:29,0:27:0.85:13,1,0	0/0:114,0:90:92.63:0,93,1841	./.	0/0:15,0:14:24.04:0,24,349	0/0:41,0:39:74.37:0,74,829	./.	0/1:22,0:18:1.71:113,0,2	0/1:16,1:15:7.37:84,0,7	0/1:15,2:15:11.75:96,0,12
chr10	5819607	.	CTG	C	1099.35	PASS	AB=0.863;AC=23;AF=0.460;AN=50;BaseQRankSum=5.715;DP=753;FS=10.803;HRun=0;HaplotypeScore=114.9531;InbreedingCoeff=0.5235;MQ=36.29;MQ0=53;MQRankSum=-6.718;QD=3.42;ReadPosRankSum=-2.086;VQSLOD=1.1170;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,1:27:6.01:0,6,73	0/0:13,0:11:21.06:0,21,300	./.	0/0:19,0:2:3.01:0,3,44	0/0:25,0:20:0.43:0,0,410	1/1:12,8:18:5.93:48,6,0	1/1:30,4:26:2.96:19,3,0	1/1:29,3:10:18.05:214,18,0	1/1:19,9:20:11.84:94,12,0	0/0:28,0:24:9.92:0,10,504	0/0:21,0:21:42.13:0,42,628	0/0:25,1:24:24.06:0,24,350	0/0:24,0:21:39.12:0,39,580	0/0:32,0:28:41.82:0,42,579	1/1:14,11:19:2.84:37,3,0	./.	1/1:18,2:15:5.89:48,6,0	0/1:30,1:25:33.68:34,0,460	1/1:4,11:13:30.03:330,30,0	1/1:19,10:27:2.96:31,3,0	0/0:113,0:90:99:0,112,1728	./.	0/0:15,0:14:29.46:0,29,364	0/0:40,1:39:51.17:0,51,786	1/1:24,7:23:0.47:1,0,0	0/1:18,4:18:10.19:141,0,10	1/1:10,7:15:9.02:109,9,0	0/1:12,5:15:9.39:165,0,9
chr10	5819671	.	GTC	G	1196.43	PASS	AB=0.982;AC=30;AF=0.536;AN=56;BaseQRankSum=3.316;DP=744;FS=6.087;HRun=0;HaplotypeScore=127.8877;InbreedingCoeff=-0.0415;MQ=38.11;MQ0=40;MQRankSum=0.169;QD=1.95;ReadPosRankSum=-4.132;VQSLOD=0.2986;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:26:0:0,0,1	0/1:10,0:10:31.01:45,0,31	0/0:19,0:5:2.89:0,3,18	0/1:29,0:8:0.15:0,0,44	0/1:31,0:30:27.13:27,0,215	0/1:11,0:10:0.10:0,0,0	0/1:31,0:20:0.41:1,0,0	0/1:36,7:14:12.35:118,0,12	1/1:21,1:18:14.37:97,14,0	0/1:34,0:32:78.75:79,0,379	0/1:17,0:16:0.95:1,0,125	0/1:24,3:25:66:129,0,66	0/0:25,0:23:26.56:0,27,253	0/0:22,1:21:31.41:0,31,299	1/1:25,0:20:11.95:61,12,0	1/1:10,0:8:2.61:24,3,0	0/1:15,0:13:6.99:23,0,7	0/1:29,0:25:8.06:8,0,285	1/1:16,0:8:11.21:75,11,0	1/1:30,1:30:14.84:162,15,0	0/1:74,0:56:1.21:1,0,543	1/1:35,0:35:3.66:26,4,0	0/1:33,0:32:60.13:60,0,200	0/0:35,0:34:22.78:0,23,496	1/1:26,0:24:14.51:120,15,0	0/1:30,1:27:55.77:186,0,56	0/1:21,0:20:38.95:79,0,39	0/1:11,0:10:30:30,0,59
chr10	5819677	.	G	GTC	910.98	PASS	AB=0.970;AC=20;AF=0.357;AN=56;BaseQRankSum=4.396;DP=758;FS=8.648;HRun=0;HaplotypeScore=136.5633;InbreedingCoeff=0.1672;MQ=38.57;MQ0=47;MQRankSum=2.989;QD=2.55;ReadPosRankSum=0.540;VQSLOD=2.2054;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:25:0:1,0,0	0/0:11,0:11:23.04:0,23,182	1/1:18,0:2:2.04:6,2,0	0/0:36,0:6:1.02:0,1,57	0/0:30,0:29:35.09:0,35,346	1/1:13,0:12:2.56:24,3,0	0/1:19,10:19:0.16:0,0,0	0/0:43,0:13:28.52:0,29,165	0/1:21,1:18:10.02:110,0,10	0/0:36,0:35:73.54:0,74,617	0/0:20,0:19:23.98:0,24,219	0/0:23,0:22:24.52:0,25,207	0/0:25,0:23:34.33:0,34,288	0/0:24,0:22:38.89:0,39,429	0/1:29,0:24:14.31:172,0,14	1/1:8,1:7:2.69:35,3,0	0/0:16,0:14:9.75:0,10,53	0/0:28,0:24:10.99:0,11,366	0/1:14,0:8:48.96:54,0,49	0/1:33,0:32:3.62:229,0,4	0/0:71,0:53:45.49:0,45,593	1/1:35,0:34:7.50:52,8,0	0/1:33,0:32:20.88:21,0,264	0/0:38,0:37:58.19:0,58,513	1/1:27,3:28:0.82:249,1,0	0/1:35,0:31:40.55:41,0,137	0/1:19,0:19:53.81:54,0,60	0/1:10,0:9:16.61:19,0,17
chr10	5819683	.	G	GTC	215.68	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=6.902;DP=771;FS=8.843;HRun=0;HaplotypeScore=139.7985;InbreedingCoeff=0.1324;MQ=39.11;MQ0=41;MQRankSum=-0.880;QD=1.00;ReadPosRankSum=5.091;VQSLOD=1.5746;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:17,15:30:0.30:0,0,1	0/0:12,0:12:26.27:0,26,209	0/0:27,0:3:5.93:0,6,58	0/0:40,0:5:8.74:0,9,65	0/0:30,0:29:35.31:0,35,353	0/0:16,0:15:5.87:0,6,48	0/1:28,0:19:0.18:0,0,1	0/1:39,0:15:68.64:69,0,72	0/0:22,0:18:14.98:0,15,71	0/0:42,0:41:75.16:0,75,760	0/0:21,0:20:29.14:0,29,230	0/0:25,0:24:16.73:0,17,287	0/0:24,0:22:33.66:0,34,279	0/0:23,0:21:32.11:0,32,362	0/0:29,0:24:2.26:0,2,80	0/0:9,0:7:0.22:0,0,1	0/1:15,0:13:2.60:3,0,47	0/0:25,0:22:28.91:0,29,420	0/0:8,0:7:4.84:0,5,88	0/0:34,0:33:29.77:0,30,252	0/0:71,0:52:42.94:0,43,617	0/0:34,0:33:8.48:0,8,58	0/1:31,0:30:22.42:22,0,232	0/1:38,0:37:3.33:3,0,406	0/0:30,0:29:21.07:0,21,249	0/1:35,0:31:98.85:147,0,99	0/1:20,0:20:47.79:48,0,50	1/1:10,0:9:8.53:46,9,0
chr10	5819687	.	G	GTC	906.01	PASS	AB=0.912;AC=12;AF=0.214;AN=56;BaseQRankSum=2.994;DP=783;FS=15.862;HRun=0;HaplotypeScore=143.1596;InbreedingCoeff=0.0730;MQ=38.92;MQ0=44;MQRankSum=-0.909;QD=3.55;ReadPosRankSum=3.169;VQSLOD=1.9594;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:35,0:33:0.03:0,0,0	0/0:15,0:15:28.78:0,29,213	0/0:34,0:3:8.93:0,9,79	0/0:43,0:4:11.85:0,12,92	0/0:29,0:28:34.72:0,35,330	0/1:16,0:15:2.34:2,0,51	1/1:31,0:22:0.44:2,0,0	0/1:38,0:15:39.59:40,0,65	0/0:23,0:19:1.41:0,1,45	0/0:41,0:40:88.76:0,89,645	0/0:21,0:20:28.44:0,28,215	0/0:25,0:24:44.60:0,45,360	0/0:21,0:19:28.45:0,28,238	0/0:24,0:22:31.19:0,31,346	0/1:28,0:24:5.48:5,0,57	0/0:8,0:7:2.53:0,3,18	0/0:17,0:15:12.09:0,12,92	0/0:25,0:22:23.81:0,24,406	0/1:11,0:10:8.51:9,0,67	0/0:34,0:33:28.75:0,29,272	0/0:65,0:46:38.52:0,39,509	0/0:36,0:35:3.75:0,4,26	0/1:30,0:29:28.74:29,0,189	0/0:37,0:36:56.80:0,57,410	0/0:30,0:29:16.83:0,17,196	0/1:17,15:31:63.18:550,0,63	1/1:8,12:20:5.17:294,5,0	0/1:5,4:9:14.51:103,0,15
chr10	5819718	.	C	CAT	410.35	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=1.861;DP=702;FS=17.580;HRun=0;HaplotypeScore=159.0389;InbreedingCoeff=0.7614;MQ=57.65;MQ0=25;MQRankSum=-5.056;QD=25.65;ReadPosRankSum=-1.571;VQSLOD=3.2978;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:2.51:0,3,47	0/0:15,0:15:42.14:0,42,618	0/0:66,0:17:34.09:0,34,440	0/0:68,0:22:59.37:0,59,795	0/0:22,0:22:42.14:0,42,618	0/0:23,0:22:23.92:0,24,321	0/0:27,0:26:20.81:0,21,303	0/0:28,0:26:78.26:0,78,1148	0/0:18,0:17:17.91:0,18,265	0/0:33,0:32:93.31:0,93,1365	0/0:15,0:15:30.10:0,30,437	0/0:21,0:21:45.15:0,45,667	0/0:14,0:14:20.82:0,21,309	0/0:20,0:19:30.10:0,30,441	0/0:25,0:24:32.70:0,33,473	0/0:10,0:8:9.03:0,9,133	1/1:1,15:16:27.09:504,27,0	0/0:16,0:16:33.86:0,34,560	0/0:18,0:14:39.11:0,39,548	0/0:31,0:31:71.38:0,71,1063	0/0:39,0:37:57.18:0,57,819	0/0:23,0:23:18.06:0,18,265	0/0:27,0:25:48.14:0,48,686	0/0:19,0:19:36.12:0,36,530	0/0:22,0:22:51.01:0,51,751	0/0:28,0:28:81.20:0,81,1159	0/0:19,0:19:30.10:0,30,434	0/0:9,0:9:12.04:0,12,177
chr10	5821277	.	CT	C	1186.53	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=12.741;DP=627;FS=2.288;HRun=1;HaplotypeScore=82.6130;InbreedingCoeff=0.9870;MQ=87.83;MQ0=0;MQRankSum=-11.682;QD=18.25;ReadPosRankSum=0.800;VQSLOD=3.9820;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:58:99:0,174,2724	0/0:6,0:6:18.04:0,18,264	0/0:22,0:22:66.21:0,66,994	0/0:25,0:25:65.14:0,65,987	0/0:16,0:16:48.16:0,48,761	0/0:14,0:14:42.14:0,42,670	0/0:28,0:28:81.25:0,81,1247	1/1:1,13:14:38.88:313,39,0	0/0:25,0:25:75.24:0,75,1174	0/0:26,0:26:78.27:0,78,1247	0/0:15,0:15:45.15:0,45,719	0/0:20,0:20:60.20:0,60,952	0/0:22,0:22:66.22:0,66,1049	0/0:32,0:32:96.31:0,96,1510	0/0:18,0:18:54.18:0,54,859	0/0:11,0:11:33.10:0,33,505	0/0:45,0:45:99:0,135,2127	0/0:16,0:16:48.16:0,48,767	0/0:21,0:21:63.20:0,63,962	0/0:18,0:18:54.17:0,54,839	0/0:37,0:37:99:0,111,1772	0/0:20,1:21:60.20:0,60,957	0/0:14,0:14:42.14:0,42,665	0/0:36,0:36:99:0,108,1678	0/0:16,0:16:45.15:0,45,719	1/1:1,23:24:23.81:500,24,0	1/1:2,21:23:59.27:453,59,0	1/1:2,2:4:11.34:77,11,0
chr10	5821280	.	AAAAT	A	2325.88	PASS	AB=0.511;AC=7;AF=0.125;AN=56;BaseQRankSum=12.634;DP=628;FS=1.647;HRun=0;HaplotypeScore=118.4113;InbreedingCoeff=0.7782;MQ=86.68;MQ0=0;MQRankSum=-11.866;QD=36.92;ReadPosRankSum=1.219;VQSLOD=3.7462;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:63,0:63:99:0,190,5200	0/0:7,0:7:21.07:0,21,588	0/0:22,0:22:17.08:0,17,1681	0/0:23,0:23:65.90:0,66,1519	0/0:15,0:15:45.15:0,45,1175	0/0:15,0:15:45.15:0,45,1239	0/0:29,0:29:87.29:0,87,2362	1/1:1,13:14:38.92:551,39,0	0/0:24,0:24:72.24:0,72,1944	0/0:27,0:27:81.27:0,81,2209	0/0:16,0:16:48.16:0,48,1308	0/0:19,0:19:54.18:0,54,1428	0/0:21,0:21:63.20:0,63,1613	0/0:34,0:34:99:0,102,2755	0/0:17,0:17:51.18:0,51,1427	0/0:11,0:11:33.11:0,33,924	0/0:44,0:44:99:0,129,3610	0/0:16,0:16:48.16:0,48,1324	0/0:22,0:22:66.18:0,66,1696	0/0:17,0:17:51.18:0,51,1395	0/0:37,0:37:99:0,111,2980	0/0:21,0:21:60.19:0,60,1610	0/0:13,0:13:39.12:0,39,977	0/0:36,0:36:99:0,108,2984	0/0:16,0:16:48.16:0,48,1309	0/1:1,23:24:11.74:958,0,12	1/1:0,21:21:59.21:870,59,0	1/1:2,2:4:2.69:86,3,0
chr10	5821612	.	T	TGGAA	1449.24	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-0.932;DP=558;FS=0.000;HRun=0;HaplotypeScore=100.4248;InbreedingCoeff=0.8584;MQ=64.39;MQ0=4;MQRankSum=1.630;QD=36.23;ReadPosRankSum=1.183;VQSLOD=3.6817;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:27,12:40:78.25:1544,78,0	0/0:8,0:8:21.07:0,21,340	0/0:21,0:15:8.99:0,9,119	0/0:23,0:20:15.04:0,15,224	0/0:11,0:11:21.05:0,21,311	0/0:11,0:11:15.05:0,15,233	0/0:27,0:27:60.10:0,60,928	0/0:21,0:20:27.09:0,27,421	0/0:27,0:27:66.23:0,66,1087	0/0:23,0:23:48.16:0,48,763	0/0:15,0:15:27.09:0,27,442	0/0:18,0:18:36.12:0,36,592	0/0:20,0:20:45.15:0,45,716	0/0:18,0:18:36.11:0,36,559	0/0:23,0:23:48.15:0,48,764	0/0:22,0:22:57.19:0,57,941	0/0:31,0:30:53.39:0,53,841	0/0:20,0:20:30.51:0,31,717	0/0:11,0:11:21.07:0,21,336	0/0:17,0:17:30.10:0,30,487	0/0:20,0:20:36.12:0,36,587	0/0:26,0:26:69.24:0,69,1136	0/0:15,0:15:39.12:0,39,619	0/0:28,0:28:45.17:0,45,949	0/0:14,0:14:36.12:0,36,576	0/0:22,0:22:57.17:0,57,865	0/0:23,0:23:51.16:0,51,792	0/0:3,0:3:9.03:0,9,137
chr10	5821669	.	GGAAGGAAGGAAA	G	744.06	PASS	AB=0.800;AC=2;AF=0.036;AN=56;BaseQRankSum=4.897;DP=596;FS=2.757;HRun=0;HaplotypeScore=208.2366;InbreedingCoeff=0.0560;MQ=57.27;MQ0=13;MQRankSum=-3.211;QD=19.08;ReadPosRankSum=0.619;VQSLOD=2.8441;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:54.18:0,54,1316	0/0:6,0:6:9.03:0,9,413	0/0:26,0:10:17.55:0,18,554	0/0:32,0:18:40.75:0,41,1629	0/0:16,0:16:42.14:0,42,2431	0/1:15,0:15:29.46:29,0,1822	0/0:23,0:23:66.18:0,66,2462	0/0:21,0:21:30.10:0,30,1266	0/0:31,0:31:81.28:0,81,3910	0/0:19,0:19:51.15:0,51,2210	0/0:13,0:12:33.11:0,33,1597	0/0:18,0:18:48.15:0,48,2362	0/0:21,0:21:60.21:0,60,2917	0/0:20,0:20:54.19:0,54,2724	0/0:22,0:22:57.20:0,57,2458	0/0:24,0:24:51.17:0,51,2538	0/1:7,16:23:9.29:803,0,9	0/0:17,0:17:36.12:0,36,1411	0/0:27,0:16:39.12:0,39,1836	0/0:20,0:20:48.15:0,48,2227	0/0:35,0:35:96.31:0,96,4016	0/0:25,0:25:63.22:0,63,3037	0/0:12,0:12:27.09:0,27,1152	0/0:24,0:24:66.23:0,66,3271	0/0:14,0:14:42.13:0,42,1792	0/0:27,0:27:72.25:0,72,3439	0/0:16,0:16:45.15:0,45,2138	0/0:7,0:7:21.07:0,21,1121
chr10	5821681	.	AGAAG	A	844.05	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.492;DP=583;FS=2.618;HRun=0;HaplotypeScore=118.9234;InbreedingCoeff=0.8933;MQ=55.80;MQ0=16;MQRankSum=-5.345;QD=14.07;ReadPosRankSum=3.487;VQSLOD=3.5276;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:3,37:40:48.95:763,49,0	0/0:4,0:4:12.04:0,12,224	0/0:28,0:10:24.01:0,24,385	0/0:37,0:24:61.33:0,61,849	0/0:17,0:17:51.11:0,51,1184	0/0:17,0:17:24.34:0,24,931	0/0:22,0:22:45.07:0,45,793	0/0:11,0:10:21.02:0,21,352	0/0:32,0:32:87.03:0,87,1614	0/0:19,0:19:42.12:0,42,852	0/0:14,0:13:33.03:0,33,706	0/0:19,0:19:51.12:0,51,1073	0/0:22,0:22:60.16:0,60,1327	0/0:20,0:20:57.13:0,57,1133	0/0:19,0:19:42.13:0,42,916	0/0:17,0:17:45.13:0,45,966	1/1:20,0:20:3.73:190,4,0	0/0:13,0:13:33.06:0,33,645	0/0:26,0:13:33.11:0,33,778	0/0:18,0:18:47.81:0,48,912	0/0:33,0:33:84.22:0,84,1764	0/0:24,0:24:69.15:0,69,1357	0/0:11,0:11:30.04:0,30,575	0/0:26,0:26:72.17:0,72,1415	0/0:18,0:18:48.04:0,48,834	0/0:27,0:26:69.09:0,69,1412	0/0:18,0:18:48.09:0,48,991	0/0:11,0:10:27.09:0,27,577
chr10	5828421	.	AAAAG	A	578.92	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=6.344;DP=274;FS=0.000;HRun=0;HaplotypeScore=44.3224;InbreedingCoeff=0.4847;MQ=57.84;MQ0=9;MQRankSum=0.256;QD=17.54;ReadPosRankSum=3.784;VQSLOD=2.5184;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,21:25:47.44:673,47,0	0/0:3,0:3:5.97:0,6,91	0/0:7,0:4:5.14:0,5,73	0/1:7,0:4:4.55:5,0,44	0/0:15,0:14:36.44:0,36,544	0/0:6,0:5:11.99:0,12,198	0/0:7,0:7:14.90:0,15,141	0/0:17,0:15:35.29:0,35,413	0/0:9,0:9:20.98:0,21,250	0/0:9,0:9:18.52:0,19,317	0/0:8,0:8:20.87:0,21,216	0/0:3,0:3:9.03:0,9,106	0/0:6,0:6:8.96:0,9,80	0/0:9,0:9:17.91:0,18,147	0/0:12,0:10:18.31:0,18,151	0/0:4,0:4:11.95:0,12,147	0/0:11,0:11:26.49:0,26,162	0/0:15,0:15:39.01:0,39,641	0/0:8,0:7:14.87:0,15,119	0/0:12,0:12:26.86:0,27,352	0/0:8,0:8:18.06:0,18,269	0/0:4,0:4:8.97:0,9,91	0/0:7,0:7:12.04:0,12,234	0/0:13,0:13:35.74:0,36,348	0/0:9,0:9:26.98:0,27,392	0/0:19,0:19:38.91:0,39,455	0/0:11,0:10:30.06:0,30,385	0/0:9,0:7:21.07:0,21,414
chr10	5828611	.	T	TA	268.84	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.173;DP=532;FS=1.002;HRun=0;HaplotypeScore=62.0695;InbreedingCoeff=0.9731;MQ=96.30;MQ0=0;MQRankSum=-5.912;QD=14.15;ReadPosRankSum=0.687;VQSLOD=4.6376;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,138,1911	0/0:5,0:5:15.04:0,15,193	0/0:32,0:32:90.29:0,90,1233	0/0:21,0:21:53.98:0,54,720	0/0:11,0:11:33.10:0,33,444	0/0:8,0:8:21:0,21,269	0/0:28,0:28:78.24:0,78,1073	0/0:24,0:24:66.21:0,66,905	0/0:25,0:25:75.21:0,75,1026	0/0:15,0:15:42.14:0,42,587	0/0:8,0:8:24.08:0,24,336	0/0:10,0:10:30.06:0,30,397	0/0:12,0:12:33.11:0,33,461	0/0:18,0:18:54.17:0,54,736	0/0:24,0:24:69.17:0,69,923	0/0:14,0:14:42.10:0,42,565	1/1:3,10:18:44.18:364,44,0	0/0:21,0:21:57.18:0,57,780	0/0:19,0:19:54.18:0,54,755	0/0:9,0:9:21.07:0,21,293	0/0:39,0:39:99:0,117,1584	0/0:16,0:16:48.16:0,48,670	0/0:16,0:16:45.15:0,45,629	0/0:21,0:21:63.21:0,63,881	0/0:13,0:13:39.13:0,39,545	0/0:27,0:27:81.27:0,81,1124	0/0:18,0:18:51.08:0,51,668	0/0:10,0:10:30.10:0,30,419
chr10	5828612	.	G	GGGAAGTACTTCT	2504.82	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.403;DP=536;FS=2.036;HRun=0;HaplotypeScore=182.2630;InbreedingCoeff=0.9585;MQ=95.97;MQ0=0;MQRankSum=-6.773;QD=113.86;ReadPosRankSum=0.899;VQSLOD=3.8899;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,141,4952	0/0:5,0:5:12.04:0,12,461	0/0:32,0:32:93.31:0,93,3161	0/0:21,0:21:51.64:0,52,1806	0/0:12,0:12:30.10:0,30,1111	0/0:8,0:8:20.89:0,21,596	0/0:28,0:28:84.25:0,84,2834	0/0:23,0:23:66.22:0,66,2297	0/0:25,0:25:72.25:0,72,2728	0/0:15,0:15:42.14:0,42,1613	0/0:8,0:8:24.08:0,24,877	0/0:10,0:10:27.09:0,27,1041	0/0:12,0:12:33.11:0,33,1217	0/0:18,0:18:54.19:0,54,1898	0/0:24,0:24:66.23:0,66,2398	0/0:14,0:14:39.13:0,39,1436	1/1:12,10:21:51.18:2600,51,0	0/0:21,0:21:60.18:0,60,2113	0/0:19,0:19:57.19:0,57,1910	0/0:9,0:9:21.07:0,21,779	0/0:39,0:39:99:0,111,3982	0/0:17,0:17:48.15:0,48,1692	0/0:16,0:16:45.15:0,45,1600	0/0:21,0:21:63.22:0,63,2377	0/0:13,0:13:39.13:0,39,1460	0/0:27,0:27:81.28:0,81,3062	0/0:18,0:18:48.15:0,48,1631	0/0:10,0:10:30.10:0,30,1078
chr10	5828852	.	A	AG	1624.94	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=9.645;DP=721;FS=4.770;HRun=1;HaplotypeScore=78.3580;InbreedingCoeff=0.9947;MQ=80.56;MQ0=0;MQRankSum=0.132;QD=33.85;ReadPosRankSum=1.304;VQSLOD=3.5046;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:63,0:63:99:0,180,2434	0/0:7,0:7:21.07:0,21,293	0/0:21,0:21:60.19:0,60,811	0/0:18,0:18:44.87:0,45,620	0/0:18,0:18:48.16:0,48,671	0/0:20,0:20:54.18:0,54,755	0/0:27,0:27:78.26:0,78,1090	0/0:31,0:31:90.30:0,90,1254	0/0:32,0:32:96.28:0,96,1316	0/0:30,0:30:90.30:0,90,1255	0/0:21,0:21:60.20:0,60,837	0/0:26,0:26:78.24:0,78,1067	0/0:26,0:26:78.26:0,78,1090	0/0:29,0:29:84.28:0,84,1173	0/0:19,0:19:57.19:0,57,790	0/0:29,0:29:87.29:0,87,1215	1/1:0,48:48:99:1720,123,0	0/0:21,0:21:63.18:0,63,861	0/0:27,0:27:81.26:0,81,1111	0/0:22,0:22:66.17:0,66,888	0/0:45,0:45:99:0,135,1814	0/0:20,0:20:51.17:0,51,712	0/0:22,0:22:51.17:0,51,712	0/0:32,0:32:96.32:0,96,1342	0/0:10,0:10:27.09:0,27,378	0/0:27,0:27:81.27:0,81,1132	0/0:19,0:19:51.16:0,51,696	0/0:11,0:11:33.02:0,33,416
chr10	5828970	.	AGG	A	5997.41	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=15.742;DP=601;FS=4.186;HRun=2;HaplotypeScore=108.7284;InbreedingCoeff=0.9984;MQ=78.71;MQ0=0;MQRankSum=-2.590;QD=35.49;ReadPosRankSum=3.019;VQSLOD=5.1240;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,132,2528	0/0:6,0:6:18.06:0,18,359	0/0:19,0:19:42.12:0,42,805	0/0:22,0:22:52.66:0,53,942	0/0:20,0:20:60.16:0,60,1135	1/1:0,15:15:33.11:491,33,0	1/1:0,22:22:54.18:806,54,0	0/0:28,0:28:84.27:0,84,1607	1/1:5,24:29:75.61:1060,76,0	0/0:20,0:20:60.21:0,60,1195	0/0:19,0:19:54.11:0,54,939	0/0:21,0:21:60.12:0,60,1113	0/0:36,0:36:99:0,105,2042	0/0:27,0:27:81.16:0,81,1488	1/1:0,21:21:48.16:720,48,0	1/1:0,20:20:48.16:712,48,0	0/0:33,0:33:99:0,99,1919	0/0:10,0:10:30.10:0,30,598	1/1:0,16:16:45.06:580,45,0	1/1:3,8:11:27.55:382,28,0	0/0:36,0:36:99:0,99,1886	1/1:0,20:20:51.13:723,51,0	0/0:13,0:13:38.77:0,39,625	0/0:19,0:18:57.14:0,57,1062	1/1:4,11:15:38.82:523,39,0	0/0:23,0:23:69.20:0,69,1338	0/0:20,0:20:57.19:0,57,1125	0/0:14,0:14:42.13:0,42,803
chr10	5829118	.	A	ACTC	9660.27	PASS	AC=54;AF=1.000;AN=54;DP=267;FS=0.000;HRun=0;HaplotypeScore=96.6720;InbreedingCoeff=-0.0107;MQ=37.64;MQ0=0;QD=36.18;VQSLOD=4.9659;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,20:20:42.14:642,42,0	1/1:0,10:10:30.10:406,30,0	1/1:2,0:2:5.95:57,6,0	./.	1/1:0,7:7:18.06:272,18,0	1/1:0,6:6:18.06:271,18,0	1/1:1,9:10:21.07:295,21,0	1/1:1,7:8:24.07:280,24,0	1/1:3,7:10:24.05:316,24,0	1/1:2,12:14:42.14:630,42,0	1/1:0,15:15:36.12:535,36,0	1/1:1,8:9:27.07:347,27,0	1/1:0,11:11:33.11:447,33,0	1/1:0,13:13:39.13:555,39,0	1/1:0,7:7:18.06:273,18,0	1/1:0,10:10:30.10:441,30,0	1/1:0,11:11:24.08:329,24,0	1/1:1,8:9:24.08:327,24,0	1/1:1,6:7:12:114,12,0	1/1:0,7:7:21.06:284,21,0	1/1:0,14:14:27.09:386,27,0	1/1:0,12:12:30.06:436,30,0	1/1:0,5:5:12.04:181,12,0	1/1:0,7:7:12.46:143,12,0	1/1:1,12:13:36.12:556,36,0	1/1:2,14:16:45.13:580,45,0	1/1:0,11:11:30.10:434,30,0	1/1:0,3:3:9.03:124,9,0
chr10	5829169	.	C	CT	796.42	PASS	AB=0.952;AC=41;AF=0.788;AN=52;BaseQRankSum=-0.266;DP=243;FS=0.988;HRun=0;HaplotypeScore=223.2617;InbreedingCoeff=0.1152;MQ=29.28;MQ0=1;MQRankSum=0.358;QD=3.42;ReadPosRankSum=0.095;VQSLOD=3.2324;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,0:5:2.57:14,3,0	1/1:5,0:5:5.17:20,5,0	./.	./.	1/1:7,0:7:1.76:5,2,0	0/1:9,0:9:0.73:1,0,1	0/0:5,1:6:6.59:0,7,25	0/1:13,0:11:9.91:45,0,10	1/1:12,0:11:7.23:39,7,0	0/1:13,0:13:2.42:50,0,2	1/1:6,0:6:0.54:2,1,0	1/1:8,0:8:1.69:11,2,0	1/1:11,0:11:3.68:35,4,0	1/1:3,0:3:0.58:6,1,0	1/1:5,0:5:10.30:49,10,0	1/1:10,0:10:1.55:42,2,0	0/1:10,0:10:3.38:33,0,3	0/1:3,3:6:3.67:34,0,4	1/1:16,0:14:8.72:58,9,0	0/1:11,0:11:2.97:9,0,3	1/1:5,0:5:1.93:7,2,0	0/1:9,0:9:1.84:3,0,2	1/1:13,0:12:3.43:33,3,0	0/0:3,0:2:0:0,0,0	1/1:14,0:14:0.22:13,0,0	1/1:15,0:14:15.80:123,16,0	1/1:14,0:13:30.89:155,31,0	1/1:13,0:13:18.09:117,18,0
chr10	5829202	.	C	CTGTG	883.76	PASS	AB=0.964;AC=17;AF=0.304;AN=56;BaseQRankSum=5.377;DP=428;FS=0.608;HRun=0;HaplotypeScore=143.6306;InbreedingCoeff=0.3431;MQ=57.46;MQ0=4;MQRankSum=-2.521;QD=4.70;ReadPosRankSum=1.905;VQSLOD=2.7222;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:21.07:0,21,299	0/0:5,0:5:9.03:0,9,120	0/0:26,0:13:21.02:0,21,381	0/0:32,0:16:4.21:0,4,272	0/0:12,0:12:9.03:0,9,142	0/0:4,9:15:1.55:0,2,4	1/1:4,11:14:6.02:151,6,0	0/1:16,0:16:0.40:0,0,132	0/1:16,0:15:1.07:2,0,1	0/0:17,0:17:40.75:0,41,446	0/0:14,0:14:20.11:0,20,394	0/0:10,0:10:11.29:0,11,127	0/0:19,0:19:32.18:0,32,430	0/0:8,0:8:6.49:0,6,87	1/1:10,0:10:2.04:6,2,0	0/1:8,4:12:2.26:177,0,2	0/0:11,0:11:10.90:0,11,118	0/0:7,0:7:2.17:0,2,166	0/1:15,0:14:99:220,0,123	1/1:11,2:13:10.39:139,10,0	0/0:14,0:14:24.55:0,25,355	1/1:15,0:15:1.86:7,2,0	0/0:19,0:19:20.93:0,21,448	0/0:14,0:13:18.06:0,18,289	1/1:21,0:21:10.32:204,10,0	0/1:21,0:20:45.14:45,0,92	0/1:24,0:23:18.27:18,0,35	0/1:10,0:10:4.67:68,0,5
chr10	5829206	.	C	CTGTGTGTG	3539.23	PASS	AB=1.000;AC=23;AF=0.426;AN=54;BaseQRankSum=-0.147;DP=394;FS=0.579;HRun=0;HaplotypeScore=140.4675;InbreedingCoeff=0.7804;MQ=62.73;MQ0=4;MQRankSum=-4.052;QD=19.23;ReadPosRankSum=1.153;VQSLOD=3.1313;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:25.02:0,25,532	0/0:6,0:6:15.04:0,15,277	0/0:28,0:15:30.07:0,30,702	0/1:32,0:16:13.77:14,0,446	0/0:11,0:11:11.68:0,12,265	./.	1/1:15,0:14:9.03:237,9,0	1/1:14,0:14:21.07:320,21,0	0/0:11,5:15:0.94:0,1,3	0/0:11,0:11:26.93:0,27,593	0/0:12,0:12:30.08:0,30,727	0/0:7,0:7:9.03:0,9,230	0/0:16,0:16:32.32:0,32,744	0/0:7,0:7:9.03:0,9,189	1/1:5,7:12:5.12:23,5,0	1/1:9,1:10:14.91:339,15,0	0/0:10,0:10:15.05:0,15,276	0/0:7,0:7:7.23:0,7,305	1/1:10,0:9:15.05:469,15,0	1/1:8,1:9:8.69:266,9,0	0/0:15,0:15:27.03:0,27,678	1/1:15,0:15:1.49:45,1,0	0/0:18,0:18:15.01:0,15,808	0/0:14,0:13:30.10:0,30,661	1/1:14,2:16:15.04:404,15,0	1/1:16,0:18:42.07:732,42,0	1/1:19,0:23:18.04:354,18,0	1/1:1,0:8:12.04:337,12,0
chr10	5830556	.	CCCGCA	C	2536.10	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=8.797;DP=648;FS=4.733;HRun=0;HaplotypeScore=124.4304;InbreedingCoeff=0.9988;MQ=79.70;MQ0=0;MQRankSum=-10.342;QD=47.85;ReadPosRankSum=-1.445;VQSLOD=3.6274;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,46:53:99:2631,126,0	0/0:13,0:13:39.13:0,39,1198	0/0:19,0:19:54.19:0,54,1602	0/0:21,0:21:60.21:0,60,1723	0/0:24,0:24:69.24:0,69,2153	0/0:20,0:20:60.19:0,60,1829	0/0:26,0:26:75.26:0,75,2372	0/0:30,0:30:84.29:0,84,2631	0/0:25,0:25:69.24:0,69,2187	0/0:25,0:25:69.24:0,69,2109	0/0:13,0:13:39.13:0,39,1196	0/0:20,0:20:57.20:0,57,1779	0/0:15,0:15:42.14:0,42,1319	0/0:20,0:20:60.21:0,60,1854	0/0:20,0:20:60.21:0,60,1853	0/0:22,0:22:57.18:0,57,1697	0/0:27,0:27:81.28:0,81,2546	0/0:17,0:17:48.16:0,48,1522	0/0:23,0:22:54.18:0,54,1656	0/0:22,0:22:66.23:0,66,2083	0/0:41,0:41:99:0,120,3733	0/0:23,0:23:69.24:0,69,2159	0/0:14,0:14:39.13:0,39,1183	0/0:33,0:33:96.33:0,96,2981	0/0:23,0:23:69.24:0,69,2186	0/0:27,0:27:79.15:0,79,2447	0/0:23,0:23:66.23:0,66,2034	0/0:9,0:9:27.09:0,27,856
chr10	5831674	.	AATATATATATATATATATATATATATATATATATATATAT	A	1797.46	PASS	AC=10;AF=0.263;AN=38;BaseQRankSum=1.490;DP=146;FS=29.728;HRun=0;HaplotypeScore=137.7753;InbreedingCoeff=0.4838;MQ=80.60;MQ0=2;MQRankSum=-1.361;QD=30.47;ReadPosRankSum=0.531;VQSLOD=1.0314;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:12.04:0,12,594	./.	0/0:8,0:7:3.47:0,3,28	0/0:5,0:3:6.49:0,6,120	0/0:8,0:8:3.01:0,3,97	0/0:2,0:2:3:0,3,25	0/0:2,0:2:2.99:0,3,24	1/1:17,0:17:15.03:278,15,0	0/0:4,0:4:9.03:0,9,311	./.	0/0:3,0:3:3:0,3,25	./.	./.	0/0:2,0:2:3.01:0,3,49	./.	0/0:3,0:3:3:0,3,25	1/1:2,0:5:3.01:239,3,0	0/0:14,0:13:23.65:0,24,3082	0/0:4,0:4:6:0,6,54	./.	./.	0/0:2,0:2:3.01:0,3,51	0/0:6,0:6:6.01:0,6,75	./.	./.	1/1:8,5:13:15.04:495,15,0	1/1:15,1:16:3.01:304,3,0	1/1:4,4:8:6.02:608,6,0
chr10	5832145	.	CA	C	4184.57	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=10.718;DP=617;FS=3.490;HRun=1;HaplotypeScore=59.2339;InbreedingCoeff=0.9985;MQ=82.70;MQ0=0;MQRankSum=-1.348;QD=40.63;ReadPosRankSum=-0.302;VQSLOD=4.0347;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,123,1940	0/0:7,0:7:21.04:0,21,288	0/0:18,0:18:44.27:0,44,669	0/0:16,0:16:33.58:0,34,509	0/0:27,0:27:81.26:0,81,1248	0/0:23,0:23:69.19:0,69,1030	0/0:20,0:20:60.20:0,60,957	1/1:0,25:25:75.24:1028,75,0	0/0:26,0:26:78.25:0,78,1224	0/0:28,0:28:84.25:0,84,1295	0/0:22,0:22:66.20:0,66,1004	0/0:20,0:20:60.19:0,60,936	0/0:24,0:24:72.25:0,72,1149	0/0:19,0:19:57.15:0,57,838	0/0:18,0:18:54.18:0,54,863	0/0:19,0:19:57.19:0,57,909	1/1:0,23:23:69.23:964,69,0	0/0:20,0:20:60.16:0,60,909	0/0:15,0:15:45.15:0,45,717	0/0:31,0:31:93.30:0,93,1463	0/0:42,0:42:99:0,126,1988	0/0:21,0:21:63.20:0,63,983	0/0:17,0:17:48.16:0,48,762	0/0:23,0:23:69.24:0,69,1099	0/0:17,0:17:51.16:0,51,791	1/1:0,20:20:60.19:821,60,0	1/1:0,26:26:75.25:1037,75,0	1/1:0,9:9:24.08:335,24,0
chr10	5832787	.	ACTC	A	1419.47	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.218;DP=653;FS=0.000;HRun=0;HaplotypeScore=93.3183;InbreedingCoeff=0.9683;MQ=86.26;MQ0=0;MQRankSum=-4.621;QD=27.30;ReadPosRankSum=1.202;VQSLOD=3.1520;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,47:52:96.28:1514,96,0	0/0:8,0:8:24.08:0,24,530	0/0:16,0:16:45.12:0,45,860	0/0:29,0:29:72.25:0,72,1545	0/0:28,0:28:78.27:0,78,1688	0/0:19,0:19:57.20:0,57,1258	0/0:28,0:28:78.27:0,78,1721	0/0:22,0:22:63.22:0,63,1391	0/0:28,0:28:84.29:0,84,1822	0/0:21,0:21:52.75:0,53,1175	0/0:16,0:16:45.15:0,45,978	0/0:22,0:22:60.21:0,60,1320	0/0:21,0:21:60.21:0,60,1308	0/0:15,0:15:45.15:0,45,980	0/0:18,0:18:51.18:0,51,1126	0/0:25,0:25:69.22:0,69,1454	0/0:18,0:18:48.15:0,48,1017	0/0:23,0:23:66.23:0,66,1455	0/0:22,0:22:54.18:0,54,1116	0/0:16,0:16:45.15:0,45,963	0/0:70,0:70:99:0,190,4112	0/0:24,0:24:69.24:0,69,1475	0/0:14,0:14:42.14:0,42,927	0/0:31,0:31:87.30:0,87,1882	0/0:16,0:16:48.16:0,48,1045	0/0:27,0:27:78.27:0,78,1701	0/0:20,0:20:54.18:0,54,1158	0/0:4,0:4:12.04:0,12,265
chr10	5833667	.	A	AT	770.59	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-7.437;DP=522;FS=6.482;HRun=8;HaplotypeScore=47.8850;InbreedingCoeff=0.8715;MQ=67.89;MQ0=0;MQRankSum=0.067;QD=28.54;ReadPosRankSum=1.152;VQSLOD=3.9410;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:72.04:0,72,659	0/0:13,0:13:30:0,30,275	0/0:10,0:10:6.44:0,6,165	0/0:7,0:7:10.27:0,10,80	0/0:29,0:29:75.03:0,75,682	0/0:21,0:21:54.03:0,54,494	0/0:9,0:9:27.01:0,27,247	0/0:32,0:32:81.04:0,81,740	0/0:14,0:14:39.02:0,39,357	0/0:31,0:31:84.02:0,84,762	0/0:21,0:21:57.03:0,57,522	0/0:12,0:12:29.99:0,30,269	0/0:18,0:18:51.03:0,51,466	0/0:17,0:17:45.02:0,45,412	0/0:23,0:23:57.03:0,57,522	0/0:12,0:12:24:0,24,219	1/1:2,25:26:75.22:865,75,0	0/0:15,0:17:49.03:0,49,409	0/0:19,0:19:54.02:0,54,491	0/0:26,0:26:72.04:0,72,659	0/0:19,0:19:45.01:0,45,412	0/0:20,0:20:57.02:0,57,518	0/0:16,0:16:39.02:0,39,356	0/0:14,0:14:39.02:0,39,357	0/0:13,0:13:30.01:0,30,274	0/0:22,0:22:63.03:0,63,574	0/0:23,0:23:60.03:0,60,549	0/0:10,0:9:30.02:0,30,275
chr10	5834029	.	G	GT	2927	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-10.722;DP=570;FS=0.438;HRun=6;HaplotypeScore=86.0073;InbreedingCoeff=0.9646;MQ=57.04;MQ0=8;MQRankSum=2.128;QD=26.85;ReadPosRankSum=-1.299;VQSLOD=3.2459;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:51.91:0,52,324	0/0:10,0:10:20.72:0,21,180	0/0:20,0:14:42.08:0,42,421	0/0:14,0:10:6.14:0,6,143	0/0:19,0:19:49.94:0,50,371	0/0:24,0:23:63.14:0,63,643	0/0:23,0:23:63.10:0,63,642	1/1:4,21:24:60.18:731,60,0	0/0:22,0:22:63.10:0,63,627	0/0:12,0:12:25.58:0,26,194	0/0:12,0:12:26.56:0,27,223	0/0:21,0:20:49:0,49,360	0/0:13,0:12:25.68:0,26,168	0/0:25,0:24:57.77:0,58,372	0/0:24,0:24:66.15:0,66,673	0/0:18,0:18:51.10:0,51,514	0/0:33,0:32:76.51:0,77,844	0/0:15,0:15:23.17:0,23,168	0/0:22,0:22:60.10:0,60,601	0/0:27,0:27:75:0,75,747	0/0:14,0:14:15.17:0,15,117	0/0:13,0:13:36.08:0,36,367	0/0:29,0:28:51.81:0,52,344	0/0:17,0:16:26.89:0,27,258	0/0:12,0:12:33.07:0,33,336	1/1:6,29:35:56.67:1016,57,0	1/1:1,23:24:63.20:781,63,0	1/1:7,18:25:45.14:559,45,0
chr10	5834033	.	TTTGTTG	T	4462.01	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=3.872;DP=562;FS=19.016;HRun=0;HaplotypeScore=129.8754;InbreedingCoeff=0.9103;MQ=56.26;MQ0=9;MQRankSum=-10.523;QD=23.86;ReadPosRankSum=-1.040;VQSLOD=2.7561;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:22:44.27:0,44,370	1/1:5,5:10:6.02:125,6,0	0/0:22,0:16:9.03:0,9,199	0/0:14,0:9:2.38:0,2,78	1/1:9,11:20:36.08:651,36,0	0/0:24,0:23:51.17:0,51,1631	0/0:25,0:25:45.15:0,45,1324	0/0:23,0:22:24.55:0,25,563	0/0:21,0:21:54.19:0,54,1762	1/1:5,7:12:21.05:342,21,0	1/1:6,5:11:9.03:187,9,0	1/1:10,12:21:27.09:554,27,0	1/1:4,10:13:18.06:374,18,0	1/1:6,20:25:42.14:873,42,0	0/0:25,0:25:66.21:0,66,2019	0/0:18,0:18:54.14:0,54,1499	0/0:33,0:32:42.94:0,43,702	1/1:8,8:16:12.04:249,12,0	0/0:22,0:21:27.09:0,27,824	0/0:25,0:26:66.16:0,66,1970	1/1:5,8:13:9.03:178,9,0	0/0:14,0:14:36.11:0,36,987	1/1:7,20:26:41.21:826,41,0	1/1:15,1:15:6.02:104,6,0	0/0:12,0:12:24.08:0,24,672	0/0:31,0:31:51.65:0,52,1267	0/0:25,0:25:45.15:0,45,1182	0/0:18,0:18:39.13:0,39,876
chr10	5834057	.	G	GT	651.27	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=4.647;DP=548;FS=2.500;HRun=2;HaplotypeScore=91.3591;InbreedingCoeff=0.3123;MQ=59.84;MQ0=8;MQRankSum=0.964;QD=8.92;ReadPosRankSum=1.647;VQSLOD=1.4692;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:27:60.19:0,60,433	0/0:8,0:8:8.20:0,8,58	0/0:19,0:14:30.07:0,30,356	0/0:22,0:16:33.38:0,33,429	0/0:16,0:16:0.59:0,1,243	0/0:22,0:21:57.18:0,57,706	0/0:22,0:22:66.20:0,66,810	0/0:21,0:20:55.99:0,56,672	0/0:22,0:22:63.20:0,63,781	0/1:12,0:12:8.74:9,0,232	0/0:9,0:9:13.81:0,14,105	0/1:18,0:17:1.12:1,0,229	0/0:15,0:14:24.69:0,25,174	0/0:27,0:26:51.38:0,51,318	0/0:25,0:25:75.22:0,75,917	0/0:22,0:22:65.88:0,66,791	1/1:13,16:28:51.07:730,51,0	0/0:13,0:13:16.45:0,16,114	0/0:16,0:15:39.12:0,39,483	0/0:28,0:28:81.04:0,81,963	0/0:17,0:17:29.16:0,29,280	0/0:18,0:18:48.14:0,48,579	0/0:26,0:25:6.25:0,6,223	0/1:14,0:13:23.41:23,0,141	0/0:12,0:12:33.10:0,33,406	0/0:27,0:27:75.71:0,76,928	0/0:24,0:24:63.20:0,63,779	0/0:16,0:16:39.12:0,39,479
chr10	5834058	.	TTG	T	810.50	PASS	AB=0.989;AC=13;AF=0.232;AN=56;BaseQRankSum=14.734;DP=546;FS=7.508;HRun=0;HaplotypeScore=95.5757;InbreedingCoeff=-0.1035;MQ=59.80;MQ0=8;MQRankSum=-8.270;QD=3.81;ReadPosRankSum=6.307;VQSLOD=0.8620;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:27:2.81:3,0,302	0/1:7,0:7:10.57:11,0,61	0/0:20,0:15:27.11:0,27,467	0/0:22,0:16:33.64:0,34,476	0/1:16,0:16:99:124,0,134	0/0:22,0:21:60.20:0,60,1096	0/0:22,0:22:65.25:0,65,1093	0/0:21,0:20:58.74:0,59,873	0/0:22,0:22:63.21:0,63,1192	0/1:12,0:12:51.26:51,0,167	0/1:9,0:10:15.57:16,0,94	0/1:17,1:17:88.78:89,0,145	0/1:15,0:14:37.16:37,0,119	0/1:26,0:25:99:100,0,133	0/0:25,0:25:75.24:0,75,1351	0/0:22,0:22:62.37:0,62,1104	1/1:20,9:28:45.50:356,45,0	0/1:13,0:13:23.46:23,0,89	0/0:15,0:14:39.13:0,39,669	0/0:28,0:28:78.72:0,79,1433	0/0:17,0:17:0.15:0,0,198	0/0:18,0:18:51.14:0,51,838	0/1:26,0:25:46.77:124,0,47	0/1:12,1:12:31.36:31,0,140	0/0:12,0:12:36.12:0,36,585	0/0:27,0:27:78.73:0,79,1308	0/0:24,0:24:66.22:0,66,1119	0/0:16,0:16:39.13:0,39,681
chr10	5834060	.	G	GT	660.89	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.502;DP=543;FS=1.540;HRun=2;HaplotypeScore=88.8447;InbreedingCoeff=0.9465;MQ=62.24;MQ0=8;MQRankSum=1.821;QD=24.48;ReadPosRankSum=1.104;VQSLOD=3.5357;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:27:57.83:0,58,427	0/0:7,0:7:11.70:0,12,99	0/0:20,0:16:27.10:0,27,410	0/0:22,0:17:33.73:0,34,411	0/0:17,0:17:35.96:0,36,307	0/0:21,0:20:60.19:0,60,743	0/0:22,0:22:63.20:0,63,778	0/0:22,0:21:58.53:0,59,688	0/0:22,0:22:63.20:0,63,780	0/0:12,0:12:29.01:0,29,276	0/0:10,0:10:17.55:0,18,151	0/0:18,0:17:32.93:0,33,286	0/0:15,0:14:29.08:0,29,229	0/0:26,0:25:54.82:0,55,375	0/0:24,0:24:72.23:0,72,892	0/0:21,1:22:21.42:0,21,687	1/1:11,16:26:62.86:756,63,0	0/0:13,0:13:23.23:0,23,177	0/0:14,0:13:36.11:0,36,445	0/0:28,0:28:83.85:0,84,1012	0/0:17,0:17:26.72:0,27,271	0/0:18,0:18:48.14:0,48,579	0/0:25,0:24:37.12:0,37,259	0/0:12,0:11:21.75:0,22,220	0/0:12,0:12:33.10:0,33,403	0/0:26,0:26:75.70:0,76,915	0/0:25,0:25:69.20:0,69,836	0/0:16,0:16:31.51:0,32,369
chr10	5836247	.	G	GAA	4295.60	PASS	AB=0.563;AC=27;AF=0.482;AN=56;BaseQRankSum=-0.778;DP=497;FS=8.718;HRun=10;HaplotypeScore=59.0626;InbreedingCoeff=0.9064;MQ=57.91;MQ0=14;MQRankSum=0.540;QD=16.98;ReadPosRankSum=0.024;VQSLOD=2.4799;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:10,17:29:33.10:450,33,0	0/0:7,0:7:12.01:0,12,115	0/0:7,0:6:18.03:0,18,177	0/0:4,0:3:2.98:0,3,31	0/0:32,0:29:59.45:0,59,591	1/1:2,9:12:26.58:367,27,0	1/1:1,11:12:17.55:232,18,0	1/1:6,0:20:10.89:127,11,0	1/1:4,19:23:42.14:626,42,0	0/0:21,0:19:51.10:0,51,514	0/0:15,0:15:29.97:0,30,293	0/0:22,0:21:25.32:0,25,399	0/0:10,0:10:18.03:0,18,183	0/0:23,0:23:45.05:0,45,451	1/1:3,12:16:24.08:359,24,0	1/1:3,5:8:14.54:187,15,0	0/0:21,0:20:48.06:0,48,480	0/0:19,0:19:51.56:0,52,511	1/1:6,12:16:31.70:399,32,0	1/1:4,16:21:38.55:497,39,0	0/0:17,0:18:50.81:0,51,485	1/1:6,16:19:24.08:357,24,0	0/0:24,0:20:54.10:0,54,542	0/0:19,0:21:47.84:0,48,540	1/1:2,15:17:30.10:447,30,0	1/1:3,1:18:5.44:120,5,0	1/1:4,0:13:17.44:62,17,0	0/1:4,0:18:0.06:66,0,0
chr10	5836609	.	GCC	G	2844.13	PASS	AB=0.776;AC=27;AF=0.482;AN=56;BaseQRankSum=3.128;DP=447;FS=28.428;HRun=12;HaplotypeScore=69.3711;InbreedingCoeff=0.5938;MQ=74.56;MQ0=1;MQRankSum=-1.577;QD=10.94;ReadPosRankSum=4.262;VQSLOD=0.2032;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,1:32:52.10:226,52,0	0/1:2,0:2:15.45:15,0,37	0/0:29,0:22:15.34:0,15,190	0/0:16,0:13:15.30:0,15,111	0/1:15,2:18:16.43:16,0,455	1/1:7,14:20:11.49:292,11,0	1/1:3,20:25:47.57:451,48,0	1/1:10,6:17:11.64:103,12,0	1/1:6,13:19:30.04:304,30,0	0/0:17,0:17:29.07:0,29,370	0/0:11,0:11:20.54:0,21,250	0/0:3,0:6:7.49:0,7,26	0/0:12,0:15:23.56:0,24,311	0/0:13,0:14:29.36:0,29,350	1/1:3,14:17:39.05:397,39,0	0/0:2,1:15:1.67:0,2,74	1/1:3,0:16:35.67:154,36,0	0/1:9,2:14:22.93:23,0,380	0/1:5,1:16:0.62:1,0,76	0/0:3,0:9:9.86:0,10,35	0/0:17,0:19:14.52:0,15,168	0/1:9,1:16:11.52:12,0,86	0/0:13,0:13:15.49:0,15,184	0/0:19,0:22:50.14:0,50,682	1/1:0,8:8:21.05:213,21,0	1/1:4,15:20:50.84:500,51,0	1/1:3,13:16:8.02:280,8,0	1/1:0,2:3:6.01:61,6,0
chr10	5836683	.	A	AT	647.73	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-2.954;DP=598;FS=7.188;HRun=7;HaplotypeScore=65.7214;InbreedingCoeff=0.9924;MQ=78.56;MQ0=0;MQRankSum=0.297;QD=28.16;ReadPosRankSum=2.679;VQSLOD=4.4535;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:90.14:0,90,869	0/0:13,0:13:36.06:0,36,348	0/0:21,0:21:29.95:0,30,271	0/0:14,0:13:33.04:0,33,313	0/0:24,0:24:69.03:0,69,654	0/0:19,0:19:54.09:0,54,521	0/0:21,0:21:54.08:0,54,522	0/0:34,0:34:93.12:0,93,888	0/0:17,0:17:45.05:0,45,430	0/0:30,0:30:72.11:0,72,695	0/0:16,0:15:39.06:0,39,376	0/0:15,0:15:39.06:0,39,377	0/0:19,0:19:54.06:0,54,514	0/0:12,0:12:33.05:0,33,319	0/0:26,0:26:66.10:0,66,637	0/0:17,0:17:51.08:0,51,493	1/1:2,21:23:63.13:743,63,0	0/0:19,1:20:20.87:0,21,485	0/0:26,0:26:63.09:0,63,608	0/0:15,0:15:41.98:0,42,391	0/0:21,0:21:60.07:0,60,572	0/0:29,0:29:86.98:0,87,825	0/0:17,0:17:48.07:0,48,459	0/0:30,0:30:84.13:0,84,811	0/0:22,0:22:57.08:0,57,550	0/0:32,0:32:87.11:0,87,831	0/0:24,0:24:63.09:0,63,608	0/0:8,0:8:24.04:0,24,232
chr10	5837009	.	A	AACACACAC	5626.83	PASS	AB=0.753;AC=46;AF=0.821;AN=56;BaseQRankSum=-2.124;DP=717;FS=6.183;HRun=0;HaplotypeScore=199.0274;InbreedingCoeff=0.1683;MQ=65.96;MQ0=17;MQRankSum=-1.814;QD=9.99;ReadPosRankSum=-1.203;VQSLOD=3.2623;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:28,3:35:1.45:120,1,0	1/1:5,3:9:12.04:489,12,0	0/0:55,0:23:3.01:0,3,70	0/0:66,0:32:1.33:0,1,36	1/1:21,6:26:11.66:414,12,0	0/1:15,3:21:99:192,0,151	1/1:14,0:21:7.27:104,7,0	1/1:35,0:35:7.08:165,7,0	1/1:19,0:30:6.88:175,7,0	1/1:18,4:22:24.64:775,25,0	1/1:15,0:17:3.01:74,3,0	1/1:15,2:23:5.36:144,5,0	1/1:10,2:17:15.05:563,15,0	1/1:14,0:21:5.80:148,6,0	1/1:9,0:19:15.02:252,15,0	1/1:11,0:17:3.01:64,3,0	1/1:14,0:31:14.21:305,14,0	1/1:14,0:18:6.49:171,6,0	1/1:12,0:16:17.23:225,17,0	1/1:10,0:16:9:113,9,0	0/1:25,5:33:0:1,0,0	1/1:19,0:31:27:484,27,0	1/1:16,1:21:2.94:119,3,0	0/0:20,0:33:0.47:0,0,1	1/1:12,0:16:5.99:49,6,0	1/1:12,0:17:8.19:276,8,0	0/1:16,0:23:7.93:128,0,8	0/1:9,0:17:30.33:74,0,30
chr10	5837925	.	A	ATG	5422.38	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-4.875;DP=1043;FS=25.507;HRun=0;HaplotypeScore=121.9794;InbreedingCoeff=0.9996;MQ=53.27;MQ0=28;MQRankSum=0.148;QD=30.46;ReadPosRankSum=2.147;VQSLOD=3.9117;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,22:33:31.52:555,32,0	0/0:14,0:14:39.07:0,39,468	0/0:66,0:16:32.91:0,33,397	0/0:80,0:20:39.10:0,39,478	0/0:27,0:27:63.20:0,63,811	0/0:21,0:21:57.17:0,57,720	0/0:27,0:27:72.22:0,72,912	1/1:11,18:29:51.17:858,51,0	0/0:38,0:38:99:0,99,1259	0/0:48,0:48:99:0,126,1597	0/0:17,0:17:45.14:0,45,566	0/0:43,0:43:99:0,120,1510	0/0:40,0:40:96.27:0,96,1193	0/0:34,0:34:84.27:0,84,1081	0/0:27,0:27:69.21:0,69,871	0/0:25,1:26:72.23:0,72,926	1/1:5,35:40:72.21:1213,72,0	0/0:30,0:30:68.23:0,68,964	0/0:37,0:33:72.20:0,72,908	0/0:37,0:37:96.31:0,96,1235	0/0:134,0:133:99:0,340,4313	0/0:35,0:35:96.31:0,96,1235	0/0:23,0:23:60.18:0,60,758	0/0:33,0:33:84.24:0,84,1066	0/0:28,0:28:72.23:0,72,926	1/1:9,25:34:36.64:1176,37,0	1/1:1,25:26:69.24:1164,69,0	1/1:1,14:15:27.56:456,28,0
chr10	5838830	.	A	AAACAAAC	7151.07	PASS	AB=0.720;AC=22;AF=0.393;AN=56;BaseQRankSum=14.666;DP=695;FS=7.458;HRun=0;HaplotypeScore=205.1140;InbreedingCoeff=-0.5083;MQ=59.92;MQ0=3;MQRankSum=1.102;QD=14.36;ReadPosRankSum=2.672;VQSLOD=2.7877;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:61,0:62:99:0,187,4225	0/1:5,0:12:99:109,0,170	0/0:33,0:24:66.22:0,66,1051	0/0:31,0:28:77.28:0,77,1341	0/1:5,0:24:99:236,0,190	0/1:26,0:26:99:469,0,474	0/1:34,0:34:99:547,0,817	0/0:9,0:17:42.72:0,43,642	0/1:12,0:16:99:491,0,324	0/1:6,0:13:99:173,0,168	0/1:6,0:18:99:184,0,194	1/1:3,0:22:9.09:289,9,0	0/1:9,0:21:99:172,0,263	0/1:7,0:22:99:191,0,188	0/1:17,1:21:99:509,0,399	0/1:13,0:16:99:409,0,251	0/1:9,0:34:99:364,0,258	0/1:9,0:23:99:215,0,274	0/1:23,0:26:99:458,0,588	0/1:23,0:29:99:670,0,537	0/1:10,0:36:99:299,0,216	0/1:19,0:26:99:557,0,303	0/1:8,0:19:99:158,0,238	0/1:15,0:41:99:385,0,503	0/1:10,0:15:99:268,0,219	0/0:4,0:23:46.90:0,47,1087	0/0:6,0:22:60.17:0,60,1034	0/0:3,0:9:27.09:0,27,450
chr10	5839088	.	AAC	A	4413.08	PASS	AB=0.594;AC=21;AF=0.375;AN=56;BaseQRankSum=-3.590;DP=708;FS=0.000;HRun=0;HaplotypeScore=131.6731;InbreedingCoeff=0.7840;MQ=49.95;MQ0=27;MQRankSum=8.792;QD=16.91;ReadPosRankSum=4.717;VQSLOD=4.9448;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:40:12.71:0,13,159	1/1:1,10:10:27.04:297,27,0	0/0:32,0:14:8.98:0,9,106	0/0:35,0:17:15.39:0,15,199	0/1:6,12:19:4.51:393,0,5	0/0:10,0:26:2.68:0,3,11	0/0:21,0:29:3.39:0,3,32	0/0:34,0:33:50.68:0,51,391	0/0:8,0:16:3:0,3,27	1/1:9,18:25:40.31:512,40,0	1/1:3,14:18:35.90:380,36,0	1/1:12,13:23:32.46:355,32,0	1/1:10,15:26:41.96:464,42,0	1/1:6,17:22:33.05:381,33,0	0/0:17,0:22:14.65:0,15,108	0/0:15,0:31:2.56:0,3,24	0/0:25,0:27:16.10:0,16,121	1/1:10,13:22:19.15:396,19,0	0/0:17,0:14:20.86:0,21,165	0/0:14,0:30:5.99:0,6,50	1/1:18,20:37:41.96:464,42,0	0/0:10,0:22:2.96:0,3,19	1/1:2,11:14:26.36:251,26,0	1/1:13,22:35:44.93:519,45,0	0/0:14,0:28:11.81:0,12,87	0/0:11,0:21:38.81:0,39,316	0/0:8,0:24:44.89:0,45,382	0/0:4,0:9:23.92:0,24,214
chr10	5839121	.	CT	C	344.05	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.390;DP=638;FS=0.907;HRun=9;HaplotypeScore=117.2336;InbreedingCoeff=0.9397;MQ=64.81;MQ0=21;MQRankSum=-5.213;QD=18.11;ReadPosRankSum=1.677;VQSLOD=2.9425;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:75.21:0,75,856	0/0:16,0:16:40.36:0,40,453	0/0:43,0:23:35.51:0,36,505	0/0:27,1:12:18:0,18,182	0/0:28,0:28:74.92:0,75,828	0/0:17,0:17:15.04:0,15,173	0/0:23,0:23:48.10:0,48,539	0/0:26,0:25:57.15:0,57,640	0/0:13,0:13:21.06:0,21,242	0/0:23,0:23:43.26:0,43,508	0/0:20,0:20:45.13:0,45,519	0/0:19,0:17:48.14:0,48,551	0/0:22,0:22:54.14:0,54,607	0/0:26,0:25:63.19:0,63,727	0/0:11,0:10:14.96:0,15,143	0/0:17,0:17:14.74:0,15,173	1/1:2,17:19:48.02:439,48,0	0/0:19,0:18:54.13:0,54,603	0/0:14,0:13:33.10:0,33,380	0/0:21,0:21:39.03:0,39,420	0/0:28,0:27:60.17:0,60,683	0/0:19,0:19:23.99:0,24,247	0/0:23,0:22:60.13:0,60,674	0/0:32,0:32:75.69:0,76,866	0/0:19,0:19:30.96:0,31,337	0/0:24,0:24:60.18:0,60,689	0/0:31,0:31:68.22:0,68,753	0/0:15,0:15:39.10:0,39,439
chr10	5841113	.	T	TA	5066.32	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=15.358;DP=730;FS=2.781;HRun=1;HaplotypeScore=85.2945;InbreedingCoeff=0.9994;MQ=82.18;MQ0=0;MQRankSum=-3.224;QD=42.93;ReadPosRankSum=0.182;VQSLOD=4.7878;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:93.30:0,93,1278	0/0:14,0:14:42.14:0,42,587	0/0:21,0:21:51.09:0,51,753	0/0:19,0:19:50.33:0,50,692	0/0:42,0:42:99:0,123,1715	0/0:18,0:18:54.13:0,54,702	0/0:32,0:32:96.30:0,96,1324	1/1:0,23:23:60.20:952,60,0	0/0:33,0:33:93.25:0,93,1260	0/0:33,0:33:99:0,99,1370	0/0:18,0:18:54.18:0,54,755	0/0:28,0:28:81.27:0,81,1131	0/0:45,0:45:99:0,132,1827	0/0:25,0:25:75.25:0,75,1047	0/0:27,0:27:81.27:0,81,1126	0/0:30,0:30:90.27:0,90,1223	1/1:0,15:15:36.12:575,36,0	0/0:8,0:8:24.08:0,24,334	0/0:22,0:22:66.21:0,66,902	0/0:26,0:26:78.25:0,78,1072	0/0:57,0:57:99:0,169,2343	0/0:26,0:26:78.26:0,78,1090	0/0:16,0:16:45.15:0,45,616	0/0:21,0:21:63.21:0,63,881	0/0:20,0:20:60.20:0,60,836	1/1:0,38:38:99:1816,114,0	1/1:1,29:30:74.97:1196,75,0	1/1:0,12:12:33.11:527,33,0
chr10	5842499	.	AGTGTGTGT	A	5825.99	PASS	AB=0.708;AC=48;AF=0.889;AN=54;BaseQRankSum=2.189;DP=669;FS=7.047;HRun=0;HaplotypeScore=183.2894;InbreedingCoeff=0.2929;MQ=54.03;MQ0=11;MQRankSum=-2.519;QD=10.11;ReadPosRankSum=1.054;VQSLOD=3.2368;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:48:15.89:265,16,0	1/1:7,5:12:9.03:225,9,0	./.	0/0:42,0:19:5.75:0,6,41	1/1:9,5:15:9.01:169,9,0	1/1:7,0:24:17.90:258,18,0	1/1:17,0:28:9.03:167,9,0	0/0:20,0:19:1.99:0,2,8	1/1:7,0:22:31.77:414,32,0	1/1:23,12:35:16.79:456,17,0	1/1:12,8:20:6.91:114,7,0	1/1:11,9:21:14.84:290,15,0	1/1:9,10:20:24.08:539,24,0	1/1:14,8:21:21.07:481,21,0	0/1:11,0:25:6.40:101,0,6	1/1:7,0:24:26.51:316,27,0	1/1:14,11:26:8.86:206,9,0	1/1:20,9:29:15.03:321,15,0	1/1:14,0:20:3.01:56,3,0	1/1:6,0:9:7.52:49,8,0	1/1:44,0:43:2.11:11,2,0	1/1:4,0:12:10.79:154,11,0	1/1:6,11:17:14.89:330,15,0	1/1:17,11:29:7.83:110,8,0	1/1:7,0:12:13.24:155,13,0	0/1:17,0:24:12.52:171,0,13	1/1:11,0:21:20.94:367,21,0	1/1:8,0:13:6.02:101,6,0
chr10	5845224	.	C	CT	4145.01	PASS	AB=0.548;AC=9;AF=0.161;AN=56;BaseQRankSum=-6.393;DP=739;FS=1.769;HRun=3;HaplotypeScore=85.2907;InbreedingCoeff=0.9146;MQ=82.51;MQ0=0;MQRankSum=-1.804;QD=37.68;ReadPosRankSum=0.788;VQSLOD=3.8355;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,117,1373	0/0:18,0:18:51.16:0,51,612	0/0:29,0:29:73.05:0,73,827	0/0:29,0:29:59.07:0,59,832	0/0:32,0:32:90.26:0,90,1068	0/0:20,0:20:60.17:0,60,706	0/0:21,0:21:57.17:0,57,683	1/1:2,17:18:51.16:692,51,0	0/0:34,0:34:93.28:0,93,1115	0/0:32,0:32:81.21:0,81,934	0/0:10,0:10:30.09:0,30,360	0/0:30,0:30:84.26:0,84,1007	0/0:25,0:25:75.17:0,75,861	0/0:33,0:33:96.27:0,96,1138	0/0:25,0:24:72.05:0,72,790	0/0:23,0:23:66.19:0,66,780	1/1:1,31:32:87.29:1218,87,0	0/0:24,0:24:72.22:0,72,861	0/0:18,0:18:51.14:0,51,593	0/0:33,0:33:96.27:0,96,1129	0/0:27,0:26:72.20:0,72,849	0/0:29,0:29:73.63:0,74,823	0/0:27,0:27:78.24:0,78,933	0/0:31,0:31:93.28:0,93,1105	0/0:31,0:31:90.26:0,90,1064	0/1:4,19:23:2.80:768,0,3	1/1:1,27:28:84.28:1173,84,0	1/1:1,7:8:21.07:294,21,0
chr10	5845469	.	CTTAG	C	647.90	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.230;DP=787;FS=0.983;HRun=0;HaplotypeScore=151.8897;InbreedingCoeff=0.8578;MQ=83.31;MQ0=0;MQRankSum=-5.667;QD=21.60;ReadPosRankSum=0.180;VQSLOD=2.9996;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:59,0:59:99:0,172,4501	0/0:10,0:10:27.09:0,27,719	0/0:43,0:43:99:0,117,2717	0/0:31,0:31:72.26:0,72,1690	0/0:22,0:22:66.23:0,66,1695	0/0:28,0:28:81.28:0,81,2119	0/0:32,0:32:87.30:0,87,2284	0/0:27,0:27:75.25:0,75,1881	0/0:31,0:31:90.30:0,90,2310	0/0:29,0:29:84.29:0,84,2179	0/0:9,0:9:24.08:0,24,620	0/0:33,0:33:99:0,99,2600	0/0:25,0:25:69.22:0,69,1735	0/0:34,0:34:99:0,99,2604	0/0:33,0:33:96.32:0,96,2480	0/0:28,0:28:81.28:0,81,2103	1/1:7,23:30:41.87:743,42,0	0/0:18,0:18:51.15:0,51,1286	0/0:25,0:25:66.18:0,66,1550	0/0:37,0:37:99:0,99,2527	0/0:37,0:37:99:0,105,2738	0/0:25,0:25:75.26:0,75,1998	0/0:27,0:26:81.28:0,81,2142	0/0:25,0:25:75.26:0,75,1964	0/0:30,0:30:87.30:0,87,2321	0/0:29,0:29:87.29:0,87,2233	0/0:28,0:27:66.23:0,66,1760	0/0:2,0:2:3.48:0,3,81
chr10	5847354	.	A	AC	4078.55	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=3.806;DP=667;FS=0.000;HRun=5;HaplotypeScore=73.8309;InbreedingCoeff=0.9858;MQ=81.43;MQ0=0;MQRankSum=-2.689;QD=33.99;ReadPosRankSum=-2.101;VQSLOD=3.0433;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,123,1312	0/0:3,0:3:9.02:0,9,97	0/0:25,1:25:23.10:0,23,539	0/0:33,0:32:81.14:0,81,838	0/0:25,0:25:72.18:0,72,773	0/0:14,0:14:33.08:0,33,355	0/0:29,0:29:84.20:0,84,894	1/1:1,30:31:90.28:1168,90,0	0/0:25,0:25:72.18:0,72,774	0/0:21,0:21:57.14:0,57,613	0/0:22,0:22:54.11:0,54,571	0/0:25,0:25:72.18:0,72,774	0/0:28,0:28:69.17:0,69,741	0/0:25,0:25:69.17:0,69,739	0/0:23,0:23:60.15:0,60,645	0/0:15,0:15:39.10:0,39,419	1/1:1,29:30:78.25:1026,78,0	0/0:16,0:16:45.11:0,45,484	0/0:22,0:22:57.13:0,57,606	0/0:15,0:15:45.10:0,45,475	0/0:45,0:44:99:0,123,1322	0/0:17,0:17:45.10:0,45,476	0/0:22,0:22:66.15:0,66,700	0/0:28,0:28:81.20:0,81,870	0/0:23,0:23:66.14:0,66,700	1/1:3,22:25:33.93:779,34,0	1/1:1,18:19:45.12:592,45,0	1/1:1,14:15:39.13:513,39,0
chr10	5847571	.	T	TGC	1385.61	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-5.497;DP=596;FS=0.000;HRun=0;HaplotypeScore=97.6800;InbreedingCoeff=0.8816;MQ=64.94;MQ0=10;MQRankSum=1.265;QD=28.28;ReadPosRankSum=-1.370;VQSLOD=4.2106;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:93.23:0,93,1205	0/0:8,0:8:21.07:0,21,290	0/0:17,0:9:4.17:0,4,63	0/0:15,0:6:1.81:0,2,22	0/0:20,0:20:54.15:0,54,717	0/0:12,0:12:36.09:0,36,467	0/0:29,0:29:84.18:0,84,1049	1/1:10,0:10:12.04:194,12,0	0/0:19,0:19:51.11:0,51,642	0/0:19,0:19:48.15:0,48,658	0/0:24,0:24:63.18:0,63,822	0/0:32,0:31:90.24:0,90,1197	0/0:19,0:19:51.13:0,51,693	0/0:22,0:22:54.12:0,54,680	0/0:20,0:20:51.12:0,51,642	0/0:15,0:15:42.14:0,42,584	0/0:32,0:29:69.10:0,69,881	0/0:32,0:32:96.30:0,96,1302	0/0:16,0:15:39.05:0,39,474	0/0:32,0:31:77.87:0,78,982	0/0:33,0:33:89.25:0,89,1220	0/0:37,0:36:84.04:0,84,1145	0/0:13,0:13:39.06:0,39,488	0/0:30,0:30:84.22:0,84,1103	0/0:16,0:16:42.10:0,42,542	1/1:1,18:19:48.12:753,48,0	1/1:0,12:12:24.08:429,24,0	1/1:1,7:8:9.03:161,9,0
chr10	5847587	.	TAC	T	5645.62	PASS	AB=0.938;AC=23;AF=0.411;AN=56;BaseQRankSum=8.551;DP=710;FS=4.879;HRun=0;HaplotypeScore=92.8397;InbreedingCoeff=0.9383;MQ=60.87;MQ0=13;MQRankSum=0.225;QD=18.88;ReadPosRankSum=5.508;VQSLOD=4.6338;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,28:38:62.30:763,62,0	0/0:13,0:13:36.12:0,36,555	0/0:36,0:8:8.11:0,8,210	0/0:37,0:17:24.71:0,25,278	0/0:23,0:23:51.17:0,51,809	1/1:1,20:21:33.10:400,33,0	1/1:8,20:28:45.14:546,45,0	0/0:23,0:23:51.17:0,51,773	1/1:5,13:18:26.95:327,27,0	0/0:25,0:25:29.84:0,30,899	0/0:27,0:27:66.18:0,66,1010	0/0:32,2:34:47.90:0,48,1221	0/0:20,0:20:42.14:0,42,663	0/0:20,0:20:51.17:0,51,816	1/1:5,17:23:32.93:378,33,0	1/1:1,18:19:39.12:473,39,0	1/1:6,25:28:48.15:582,48,0	0/0:31,1:32:50.89:0,51,1262	1/1:6,13:18:39.03:426,39,0	1/1:6,22:27:51.16:619,51,0	0/0:35,0:35:78.25:0,78,1225	1/1:7,34:40:65.98:801,66,0	0/1:13,1:15:3.31:3,0,401	0/0:31,0:31:69.23:0,69,1093	1/1:3,15:18:27.08:328,27,0	0/0:23,0:23:33.29:0,33,950	0/0:19,0:19:44.98:0,45,672	0/0:11,0:11:21.07:0,21,330
chr10	5848444	.	G	GT	6407.52	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-2.870;DP=715;FS=8.199;HRun=6;HaplotypeScore=70.4849;InbreedingCoeff=0.9999;MQ=88.95;MQ0=0;MQRankSum=-6.302;QD=32.86;ReadPosRankSum=0.189;VQSLOD=4.7435;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:60,0:60:99:0,174,1765	0/0:15,0:15:45.07:0,45,450	0/0:27,0:27:60.13:0,60,612	0/0:30,0:30:65.16:0,65,696	0/0:35,0:34:93.19:0,93,942	1/1:3,19:22:54.17:679,54,0	1/1:1,24:25:69.22:868,69,0	0/0:33,0:33:87.15:0,87,873	1/1:5,23:28:60.19:755,60,0	0/0:33,0:33:93.18:0,93,934	0/0:25,0:25:69.14:0,69,697	0/0:20,0:20:60.14:0,60,612	0/0:20,0:20:54.12:0,54,551	0/0:31,0:31:84.19:0,84,856	1/1:0,13:13:39.12:491,39,0	1/1:1,20:21:54.17:679,54,0	0/0:24,0:24:63.09:0,63,626	0/0:19,0:19:54.06:0,54,533	1/1:3,25:28:75.24:943,75,0	1/1:1,23:24:72.19:887,72,0	0/0:38,0:38:99:0,111,1133	1/1:3,16:20:54.13:652,54,0	0/0:26,0:26:72.16:0,72,734	0/0:22,0:22:60.13:0,60,612	1/1:2,12:14:36.12:453,36,0	0/0:25,0:25:69.14:0,69,698	0/0:23,0:23:63.06:0,63,629	0/0:14,0:14:30.07:0,30,306
chr10	5848681	.	AAC	A	1188.24	PASS	AB=0.821;AC=20;AF=0.385;AN=52;BaseQRankSum=1.010;DP=555;FS=1.508;HRun=0;HaplotypeScore=78.0508;InbreedingCoeff=0.1902;MQ=69.42;MQ0=5;MQRankSum=1.047;QD=4.64;ReadPosRankSum=1.835;VQSLOD=2.4538;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:30,1:32:39.69:40,0,273	1/1:2,1:3:3.01:33,3,0	./.	./.	0/1:12,7:21:18.33:159,0,18	0/0:14,0:17:11.99:0,12,161	0/0:15,0:17:3:0,3,26	0/0:30,0:30:23.96:0,24,262	0/0:13,0:24:18:0,18,174	1/1:10,3:14:8.85:80,9,0	1/1:12,8:20:6.41:123,6,0	1/1:7,7:14:15.04:164,15,0	1/1:10,4:14:9.02:99,9,0	0/1:12,1:15:16.06:38,0,16	0/1:11,1:18:23.84:24,0,43	0/0:17,0:16:3:0,3,26	0/0:20,0:27:5.99:0,6,50	0/1:9,3:15:3.61:118,0,4	0/0:12,0:12:3.67:0,4,62	0/0:23,0:23:23.98:0,24,215	0/1:13,2:17:32.06:87,0,32	0/1:10,1:15:20.81:21,0,104	0/1:10,10:21:26.96:128,0,27	1/1:20,15:36:23.89:244,24,0	0/0:14,0:24:21:0,21,199	0/0:15,0:21:30.45:0,30,266	0/0:15,0:23:6.88:0,7,55	0/0:3,0:5:3:0,3,26
chr10	5849499	.	G	GTGT	7727.06	PASS	AB=0.526;AC=9;AF=0.161;AN=56;BaseQRankSum=-14.658;DP=687;FS=0.758;HRun=0;HaplotypeScore=89.1702;InbreedingCoeff=0.8754;MQ=79.83;MQ0=0;MQRankSum=-6.364;QD=54.80;ReadPosRankSum=-0.624;VQSLOD=6.2649;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:35:99:0,102,1653	0/0:10,0:10:27.07:0,27,415	0/0:15,0:15:39.12:0,39,591	0/0:23,0:23:43.58:0,44,820	0/0:25,0:25:72.25:0,72,1175	0/0:24,0:24:66.21:0,66,1053	0/0:35,0:35:99:0,99,1591	1/1:4,36:42:99:2394,114,0	0/0:26,0:26:66.19:0,66,1028	0/0:26,0:26:72.22:0,72,1128	0/0:32,0:32:87.29:0,87,1381	0/0:19,0:19:54.18:0,54,881	0/0:36,0:36:99:0,105,1648	0/0:27,0:27:72.25:0,72,1173	0/0:15,0:15:42.13:0,42,661	0/0:22,0:22:63.18:0,63,958	1/1:3,21:24:51.18:1138,51,0	0/0:3,0:3:9.03:0,9,147	0/0:23,0:23:57.18:0,57,905	0/0:27,0:27:78.23:0,78,1218	0/0:36,0:36:99:0,99,1592	0/0:13,0:13:36.12:0,36,583	0/0:19,0:19:57.19:0,57,930	0/0:32,0:32:93.27:0,93,1466	0/0:22,0:22:63.21:0,63,1007	0/1:3,26:30:7.52:1662,0,8	1/1:0,26:26:78.27:1739,78,0	1/1:2,17:19:36.12:794,36,0
chr10	5850563	.	A	AT	3066.78	PASS	AB=0.950;AC=13;AF=0.232;AN=56;BaseQRankSum=-4.799;DP=635;FS=0.405;HRun=7;HaplotypeScore=64.4736;InbreedingCoeff=0.7198;MQ=68.07;MQ0=0;MQRankSum=-1.459;QD=18.93;ReadPosRankSum=0.240;VQSLOD=3.2243;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:93.14:0,93,898	0/0:8,0:8:21.02:0,21,197	0/1:6,0:2:13.86:14,0,23	0/1:12,0:13:9.57:10,0,91	0/0:43,0:43:99:0,120,1153	0/0:27,0:27:75.10:0,75,713	0/0:18,0:18:51.08:0,51,493	1/1:7,25:32:75.20:876,75,0	0/0:18,0:18:48.07:0,48,463	0/0:23,0:23:66.09:0,66,633	0/0:18,0:18:54.09:0,54,521	0/0:19,0:19:54.09:0,54,521	0/0:15,0:15:42.07:0,42,405	0/0:23,0:23:55.90:0,56,548	0/0:26,0:26:69.11:0,69,666	0/0:25,0:25:72.12:0,72,695	1/1:3,21:24:54.17:652,54,0	0/1:21,2:23:9.40:9,0,480	0/0:20,0:20:45.07:0,45,434	0/0:35,0:35:93.05:0,93,874	0/0:11,0:10:33.05:0,33,319	0/0:25,0:25:69.10:0,69,666	0/0:25,0:25:75.11:0,75,719	0/0:23,0:23:69.11:0,69,666	0/0:34,0:34:87.11:0,87,835	1/1:4,21:25:63.17:747,63,0	1/1:1,20:22:45.14:543,45,0	1/1:3,14:17:33.10:399,33,0
chr10	5850853	.	AGTTGGTTGGTTGGTTAGTTGGTTGGTTGGTTAGTTG	A	162.63	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=0.939;DP=695;FS=1.999;HRun=0;HaplotypeScore=548.5797;InbreedingCoeff=0.8460;MQ=58.26;MQ0=13;MQRankSum=-0.696;QD=3.25;ReadPosRankSum=-0.707;VQSLOD=-0.1372;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,37:49:5.97:243,6,0	0/0:9,0:9:15.03:0,15,727	0/0:24,0:18:16.70:0,17,273	0/0:16,0:13:23.09:0,23,498	0/0:29,0:29:72.23:0,72,7939	0/0:24,0:24:60.18:0,60,4527	0/0:32,0:31:49.70:0,50,3567	0/0:35,0:30:42.04:0,42,953	0/0:27,0:27:63.22:0,63,5803	0/0:27,0:25:60.18:0,60,6896	0/0:24,0:22:59.85:0,60,5288	0/0:27,0:26:66.17:0,66,5270	0/0:24,0:24:57.17:0,57,5216	0/0:28,0:28:60.12:0,60,6213	0/0:25,0:25:66.14:0,66,5560	0/0:21,0:21:42.06:0,42,3120	0/0:25,0:25:53.94:0,54,1532	0/0:19,0:19:40.02:0,40,3940	0/0:14,0:13:21.05:0,21,1337	0/0:28,0:28:66.14:0,66,5652	0/0:28,0:28:60.19:0,60,6665	0/0:26,0:26:34.41:0,34,4230	0/0:24,0:24:48.10:0,48,3942	0/0:28,0:27:54.14:0,54,6313	0/0:17,0:17:32.98:0,33,2345	0/0:29,0:29:61.44:0,61,2321	0/0:28,0:28:23.92:0,24,368	0/0:7,0:7:21.06:0,21,817
chr10	5850869	.	AGTTGGTTGGTTGGTTAGTTG	A	2824.71	PASS	AB=1.000;AC=20;AF=0.370;AN=54;BaseQRankSum=-0.779;DP=636;FS=7.956;HRun=0;HaplotypeScore=284.3455;InbreedingCoeff=0.3144;MQ=52.63;MQ0=19;MQRankSum=-3.602;QD=8.64;ReadPosRankSum=-6.363;VQSLOD=0.2378;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:39,0:38:3.01:92,3,0	0/0:7,0:6:6.02:0,6,326	./.	0/0:14,0:8:3.01:0,3,46	0/0:33,0:33:82.44:0,82,3847	0/1:22,0:22:7.03:7,0,1498	0/1:25,0:24:3.81:4,0,919	1/1:27,0:19:10.18:93,10,0	0/0:24,0:24:54.06:0,54,2136	0/0:26,0:24:60.10:0,60,3667	0/0:27,0:25:45.14:0,45,2578	0/0:28,0:27:48.14:0,48,2147	0/0:23,0:23:45.12:0,45,2408	0/0:26,0:26:51.09:0,51,3119	0/1:27,0:27:46.66:47,0,2305	0/1:21,0:21:10.47:10,0,1256	1/1:27,0:27:41.95:631,42,0	0/0:18,0:18:37.34:0,37,1881	0/1:13,0:9:34.05:34,0,442	0/1:24,0:24:38.48:38,0,1966	0/0:24,0:23:54.13:0,54,3243	0/1:20,0:20:86.70:87,0,1549	0/0:20,0:20:35.46:0,35,1590	0/0:24,0:23:45.15:0,45,3158	0/1:19,0:18:99:151,0,808	1/1:8,21:27:60.16:1041,60,0	1/1:4,22:26:11.99:650,12,0	1/1:8,0:8:11.98:121,12,0
chr10	5850885	.	A	AGTTG	7824.90	PASS	AB=0.894;AC=26;AF=0.481;AN=54;BaseQRankSum=-11.917;DP=634;FS=1.614;HRun=0;HaplotypeScore=102.8702;InbreedingCoeff=0.6897;MQ=53.59;MQ0=18;MQRankSum=1.546;QD=23.36;ReadPosRankSum=0.931;VQSLOD=4.8288;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	1/1:3,0:2:3.01:72,3,0	0/0:19,0:9:10.78:0,11,214	0/0:15,0:9:18.04:0,18,244	1/1:8,26:38:66.17:1404,66,0	0/0:7,0:22:21:0,21,189	0/0:10,0:27:17.17:0,17,149	1/1:9,0:10:4.31:57,4,0	0/0:8,0:28:30.03:0,30,280	1/1:8,20:27:56.22:1308,56,0	1/1:8,18:27:39.04:693,39,0	1/1:9,16:24:27.09:650,27,0	0/1:6,17:23:4.39:664,0,4	1/1:5,18:23:39.13:926,39,0	0/0:5,0:21:35.86:0,36,319	0/0:3,0:17:18.02:0,18,168	0/0:8,0:27:11.84:0,12,87	1/1:5,14:21:21.07:507,21,0	0/1:7,0:10:4.21:4,0,74	0/0:8,0:21:25.58:0,26,228	1/1:10,21:30:27.09:652,27,0	0/0:5,0:22:29.92:0,30,240	1/1:11,10:21:8.72:217,9,0	1/1:7,21:27:27.09:652,27,0	0/0:3,0:17:23.36:0,23,195	0/1:25,0:23:5.43:5,0,229	0/0:22,0:22:11.87:0,12,107	0/1:6,0:6:11.77:12,0,23
chr10	5852453	.	TAATA	T	607.29	PASS	AC=14;AF=0.778;AN=18;BaseQRankSum=2.627;DP=138;FS=0.000;HRun=0;HaplotypeScore=11.0168;MQ=16.90;MQ0=105;MQRankSum=0.727;QD=12.39;ReadPosRankSum=1.845;VQSLOD=1.2984;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/0:2,0:2:6.02:0,6,97	./.	./.	./.	1/1:7,8:8:6.02:94,6,0	./.	./.	1/1:2,2:2:3.01:47,3,0	0/0:3,0:1:2.99:0,3,23	./.	./.	./.	./.	1/1:5,2:2:2.97:20,3,0	1/1:2,1:1:3.01:47,3,0	./.	./.	1/1:4,8:8:24.06:349,24,0	1/1:4,1:1:3.01:47,3,0	./.	./.	./.	./.	1/1:1,2:2:6.02:94,6,0	./.	./.	./.
chr10	5852877	.	G	GGTGT	4309.29	PASS	AB=0.800;AC=39;AF=0.750;AN=52;BaseQRankSum=-4.931;DP=592;FS=0.860;HRun=0;HaplotypeScore=112.1293;InbreedingCoeff=0.5726;MQ=52.04;MQ0=17;MQRankSum=-1.553;QD=10.12;ReadPosRankSum=0.212;VQSLOD=4.2077;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:34:27.51:0,28,375	1/1:3,1:7:5.75:83,6,0	0/0:27,0:12:3.48:0,3,11	./.	1/1:19,0:19:6.02:108,6,0	1/1:21,3:27:9.03:213,9,0	1/1:22,6:32:17.35:308,17,0	0/0:18,0:15:3:0,3,27	1/1:9,11:23:24.08:559,24,0	1/1:15,0:15:12.01:144,12,0	./.	1/1:7,10:21:17.73:364,18,0	1/1:13,6:19:5.89:141,6,0	1/1:12,4:17:3.01:71,3,0	1/1:19,8:28:18.06:418,18,0	1/1:7,5:16:17.53:308,18,0	0/1:24,0:32:99:175,0,103	1/1:13,11:27:20.81:438,21,0	1/1:16,0:16:12.51:205,13,0	1/1:11,0:10:8.99:105,9,0	1/1:11,5:18:6.02:142,6,0	1/1:14,5:20:3.01:71,3,0	1/1:24,1:23:2.97:20,3,0	1/1:17,10:28:18.06:426,18,0	1/1:8,0:15:2.74:12,3,0	0/0:16,0:19:6.89:0,7,58	0/0:14,0:19:12.01:0,12,109	0/0:7,0:12:12.01:0,12,112
chr10	5853891	.	ATGCT	A	4213.67	PASS	AB=0.520;AC=7;AF=0.125;AN=56;BaseQRankSum=13.464;DP=694;FS=6.520;HRun=0;HaplotypeScore=113.3098;InbreedingCoeff=0.8541;MQ=88.75;MQ0=0;MQRankSum=-8.134;QD=49.57;ReadPosRankSum=0.143;VQSLOD=5.7807;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,141,3734	0/0:10,0:10:27.09:0,27,699	0/0:25,0:25:75.26:0,75,1922	0/0:27,0:27:72.25:0,72,1811	0/0:22,0:22:66.23:0,66,1782	0/0:24,0:24:69.24:0,69,1855	0/0:30,0:30:84.29:0,84,2241	1/1:3,26:29:78.27:1472,78,0	0/0:28,0:28:81.28:0,81,2134	0/0:22,0:22:60.21:0,60,1571	0/0:16,0:16:48.16:0,48,1291	0/0:27,0:27:78.27:0,78,2093	0/0:31,0:31:87.30:0,87,2348	0/0:23,0:23:69.23:0,69,1765	0/0:26,0:26:78.27:0,78,2106	0/0:25,0:25:72.25:0,72,1931	0/0:23,0:23:63.22:0,63,1671	0/0:16,0:16:39.13:0,39,1037	0/0:22,0:22:66.23:0,66,1783	0/0:25,0:25:72.25:0,72,1925	0/0:33,0:33:96.33:0,96,2592	0/0:34,0:34:99:0,102,2740	0/0:19,0:19:48.15:0,48,1239	0/0:35,0:35:99:0,99,2653	0/0:17,0:17:51.18:0,51,1377	0/1:2,24:26:5.79:1261,0,6	1/1:0,25:25:69.24:1309,69,0	1/1:1,4:5:9.03:171,9,0
chr10	5854150	.	A	AT	7861.64	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=10.210;DP=713;FS=3.948;HRun=7;HaplotypeScore=77.4016;InbreedingCoeff=0.9962;MQ=83.43;MQ0=1;MQRankSum=-2.500;QD=30.12;ReadPosRankSum=0.567;VQSLOD=5.3070;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,28:31:75.23:906,75,0	0/0:10,0:10:27.04:0,27,261	0/0:25,0:24:45.05:0,45,431	0/0:20,0:19:47.91:0,48,429	0/0:36,0:36:93.12:0,93,892	1/1:0,23:23:60.18:725,60,0	1/1:3,24:27:60.18:725,60,0	0/0:31,0:31:84.11:0,84,799	1/1:0,23:23:60.18:722,60,0	0/0:29,0:29:81.08:0,81,770	0/0:18,0:18:54.07:0,54,515	0/0:13,0:13:30.03:0,30,290	0/0:22,0:22:63.07:0,63,597	0/0:20,0:20:57.07:0,57,544	1/1:3,27:30:75.23:906,75,0	1/1:3,21:24:57.17:688,57,0	0/0:38,0:38:99:0,111,1072	0/0:16,0:16:42.05:0,42,399	1/1:5,12:17:13.14:430,13,0	1/1:3,25:28:75.15:871,75,0	0/0:27,0:27:78.09:0,78,740	1/1:4,25:29:73.77:946,74,0	0/0:24,0:24:66.10:0,66,633	0/0:40,0:40:99:0,111,1066	1/1:2,27:29:78.24:942,78,0	0/0:25,0:25:72.10:0,72,690	0/0:37,0:37:96.12:0,96,916	0/0:21,0:21:54.08:0,54,521
chr10	5854586	.	A	ACT	15980.68	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-18.440;DP=748;FS=1.576;HRun=0;HaplotypeScore=80.7249;InbreedingCoeff=0.9972;MQ=82.23;MQ0=1;MQRankSum=-7.325;QD=47.99;ReadPosRankSum=1.616;VQSLOD=6.1813;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,111,1588	1/1:0,15:15:39.13:711,39,0	0/0:17,0:17:42.14:0,42,584	0/0:23,0:23:15.32:0,15,716	1/1:0,17:17:51.17:935,51,0	0/0:17,0:17:48.16:0,48,687	0/0:19,0:19:54.18:0,54,772	0/0:28,0:28:75.24:0,75,1041	0/0:26,0:26:72.24:0,72,1018	1/1:4,30:34:93.30:1647,93,0	1/1:0,23:23:63.22:1154,63,0	1/1:3,34:36:90.31:1649,90,0	1/1:0,26:26:78.27:1430,78,0	1/1:0,35:35:93.32:1705,93,0	0/0:33,0:33:93.31:0,93,1330	0/0:30,0:30:81.25:0,81,1138	0/0:37,0:37:99:0,111,1544	1/1:2,30:33:78.27:1430,78,0	0/0:25,0:25:69.22:0,69,966	0/0:14,0:14:36.11:0,36,488	1/1:5,65:72:99:3181,175,0	0/0:14,0:14:42.14:0,42,601	1/1:0,7:7:21.07:385,21,0	1/1:0,33:34:96.33:1753,96,0	0/0:31,0:31:78.24:0,78,1097	0/0:23,0:23:63.21:0,63,901	0/0:21,0:21:57.19:0,57,815	0/0:16,0:16:45.15:0,45,645
chr10	5854989	.	TC	T	3791.92	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=12.424;DP=462;FS=29.933;HRun=3;HaplotypeScore=68.4620;InbreedingCoeff=0.9955;MQ=79.90;MQ0=0;MQRankSum=-0.263;QD=33.56;ReadPosRankSum=0.734;VQSLOD=1.5284;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:93.23:0,93,1305	0/0:14,0:14:42.13:0,42,587	0/0:18,0:18:46.38:0,46,665	0/0:20,0:20:39.12:0,39,524	0/0:17,0:17:51.16:0,51,716	1/1:0,9:9:24.08:297,24,0	1/1:1,12:13:33.10:409,33,0	0/0:29,0:28:81.25:0,81,1133	1/1:1,8:9:21.07:260,21,0	0/0:21,0:21:60.20:0,60,849	0/0:12,0:12:33.09:0,33,455	0/0:21,0:21:63.21:0,63,907	0/0:17,0:17:48.16:0,48,690	0/0:15,0:15:45.14:0,45,629	1/1:0,16:16:45.14:558,45,0	1/1:1,11:12:30.09:372,30,0	0/0:27,0:27:81.27:0,81,1166	0/0:26,0:26:75.25:0,75,1078	1/1:0,13:13:39.12:483,39,0	1/1:0,5:5:15.05:186,15,0	0/0:13,0:13:39.10:0,39,540	1/1:0,12:12:36.11:446,36,0	0/0:7,0:7:21.06:0,21,284	0/0:13,0:13:36.08:0,36,490	1/1:1,23:24:63.20:781,63,0	0/0:19,0:19:54.18:0,54,775	0/0:15,0:15:45.15:0,45,647	0/0:9,0:9:27.09:0,27,386
chr10	5855261	.	G	GTATATA	966.46	PASS	AB=1.000;AC=18;AF=0.563;AN=32;BaseQRankSum=3.117;DP=116;FS=18.348;HRun=0;HaplotypeScore=48.0051;InbreedingCoeff=0.4605;MQ=84.46;MQ0=1;MQRankSum=-2.849;QD=24.78;ReadPosRankSum=1.738;VQSLOD=1.0639;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,0:5:2.99:23,3,0	./.	./.	0/0:5,0:4:8.68:0,9,85	./.	1/1:3,1:4:6:122,6,0	./.	0/0:29,0:29:63.18:0,63,1141	1/1:2,1:3:6.02:197,6,0	./.	./.	0/1:3,0:3:11.66:12,0,19	./.	0/0:1,0:1:3.01:0,3,30	1/1:1,1:2:3.01:98,3,0	1/1:1,1:2:6.02:141,6,0	0/1:12,0:12:7.69:8,0,52	0/0:18,0:19:29.99:0,30,553	1/1:4,1:6:15.05:315,15,0	1/1:0,1:1:3.01:98,3,0	./.	./.	./.	./.	1/1:1,0:1:3.01:83,3,0	0/0:4,0:4:9.02:0,9,136	./.	0/0:10,0:10:23.93:0,24,245
chr10	5855272	.	TAC	T	349.11	PASS	AB=0.984;AC=15;AF=0.417;AN=36;BaseQRankSum=2.682;DP=114;FS=0.000;HRun=0;HaplotypeScore=37.7967;InbreedingCoeff=0.3546;MQ=73.78;MQ0=1;MQRankSum=-1.713;QD=6.59;ReadPosRankSum=-2.607;VQSLOD=1.8445;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,0:3:6.87:49,7,0	./.	./.	0/0:8,0:6:14.10:0,14,105	1/1:1,0:1:2.99:24,3,0	0/1:4,0:4:2.78:19,0,3	./.	0/0:25,0:25:75.16:0,75,1129	0/0:3,0:3:2.97:0,3,10	./.	./.	0/0:3,0:3:3.34:0,3,35	./.	1/1:0,1:1:3.01:46,3,0	0/0:2,0:2:2.50:0,2,9	1/1:3,0:3:0.51:40,1,0	1/1:11,2:13:26.48:172,26,0	0/1:19,1:20:58.58:59,0,217	0/1:6,0:6:4.26:44,0,4	0/0:1,0:1:2.50:0,2,9	./.	./.	./.	./.	1/1:2,0:2:2.99:23,3,0	0/0:4,0:4:12.01:0,12,137	0/0:1,0:1:3:0,3,25	0/0:9,0:9:26.73:0,27,333
chr10	5855278	.	T	TATATATAC	1120.02	PASS	AB=0.750;AC=17;AF=0.425;AN=40;BaseQRankSum=3.377;DP=119;FS=10.617;HRun=0;HaplotypeScore=57.9725;InbreedingCoeff=0.5297;MQ=73.25;MQ0=1;MQRankSum=-2.724;QD=43.08;ReadPosRankSum=0.648;VQSLOD=2.1314;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:4:8.97:0,9,70	./.	0/0:4,0:3:2.97:0,3,20	0/0:8,0:6:8.87:0,9,117	1/1:2,0:2:0.47:1,0,0	1/1:2,1:3:3.01:126,3,0	1/1:2,0:2:2.99:24,3,0	0/0:24,0:24:60.21:0,60,1464	1/1:0,1:4:6.01:153,6,0	./.	./.	0/0:3,0:3:8.37:0,8,87	./.	0/0:1,0:1:3.01:0,3,56	1/1:1,1:2:3.01:126,3,0	1/1:2,1:3:6.02:174,6,0	0/0:11,0:11:9.43:0,9,193	0/0:25,0:25:69.48:0,69,1217	0/1:4,2:6:1.46:453,0,1	1/1:0,1:1:3.01:126,3,0	./.	./.	./.	./.	1/1:3,0:3:6:72,6,0	0/0:3,0:3:6.02:0,6,134	0/0:1,0:1:3.01:0,3,49	0/0:9,0:9:15.05:0,15,387
chr10	5855586	.	GTA	G	2281.36	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.316;DP=607;FS=1.826;HRun=0;HaplotypeScore=103.5622;InbreedingCoeff=0.9935;MQ=78.23;MQ0=1;MQRankSum=-6.097;QD=34.57;ReadPosRankSum=2.874;VQSLOD=5.7545;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,33:34:78.26:1145,78,0	0/0:7,0:7:21.07:0,21,392	0/0:28,0:27:72.17:0,72,1074	0/0:21,0:21:60.11:0,60,913	0/0:16,0:16:45.14:0,45,794	0/0:22,0:22:66.21:0,66,1201	0/0:25,0:25:63.20:0,63,1145	0/0:33,0:33:93.27:0,93,1564	0/0:35,0:35:99:0,99,1768	0/0:16,0:16:45.14:0,45,786	0/0:11,0:11:30.10:0,30,556	0/0:23,0:23:63.20:0,63,1146	0/0:25,0:25:75.23:0,75,1316	0/0:27,0:27:64:0,64,1244	0/0:23,0:23:69.22:0,69,1259	0/0:22,0:22:66.17:0,66,1097	1/1:0,32:32:87.28:1258,87,0	0/0:17,0:17:48.08:0,48,766	0/0:27,0:27:81.21:0,81,1325	0/0:9,0:9:27.07:0,27,440	0/0:42,0:42:99:0,123,2196	0/0:8,0:8:24.08:0,24,443	0/0:9,0:9:27.06:0,27,439	0/0:16,0:16:48.13:0,48,820	0/0:21,0:21:63.20:0,63,1145	0/0:33,0:33:96.30:0,96,1679	0/0:16,0:16:48.12:0,48,840	0/0:9,0:9:21.07:0,21,392
chr10	5855972	.	A	ATGTG	828.26	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.679;DP=844;FS=3.259;HRun=0;HaplotypeScore=199.2287;InbreedingCoeff=0.9941;MQ=73.15;MQ0=0;MQRankSum=-6.409;QD=9.98;ReadPosRankSum=-1.291;VQSLOD=2.6261;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:35,22:57:21.04:410,21,0	0/0:15,0:15:42.12:0,42,697	0/0:18,0:17:23.14:0,23,307	0/0:16,0:15:21.05:0,21,226	0/0:16,0:16:39.10:0,39,635	0/0:25,0:25:75.24:0,75,1287	0/0:44,0:44:99:0,108,1806	0/0:27,0:27:60.10:0,60,907	0/0:34,0:34:93.30:0,93,1593	0/0:33,0:33:96.31:0,96,1657	0/0:16,0:16:36.12:0,36,635	0/0:43,0:43:99:0,120,2088	0/0:33,0:33:78.25:0,78,1336	0/0:42,0:42:99:0,111,1875	0/0:34,0:34:87.27:0,87,1478	0/0:25,0:25:69.20:0,69,1156	1/1:17,9:26:30.04:539,30,0	0/0:24,0:24:66.23:0,66,1175	0/0:19,0:19:51.17:0,51,880	0/0:18,0:18:51.17:0,51,907	0/0:86,0:86:99:0,214,3577	0/0:30,0:30:84.23:0,84,1393	0/0:22,0:22:60.21:0,60,1049	0/0:39,0:39:99:0,108,1884	0/0:33,0:33:93.27:0,93,1583	0/0:30,0:30:78.27:0,78,1323	0/0:22,0:22:60.02:0,60,999	0/0:16,0:16:45.14:0,45,771
chr10	5855983	.	C	CGCACGT	1082.71	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.144;DP=815;FS=0.935;HRun=0;HaplotypeScore=229.3204;InbreedingCoeff=0.9078;MQ=70.82;MQ0=0;MQRankSum=-5.603;QD=13.88;ReadPosRankSum=-1.019;VQSLOD=2.7308;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:22,29:52:20.26:717,20,0	0/0:13,0:13:39.12:0,39,881	0/0:14,0:14:9.91:0,10,174	0/0:18,0:16:11.66:0,12,160	0/0:11,0:11:33.11:0,33,790	0/0:28,0:28:81.28:0,81,1908	0/0:43,0:44:99:0,117,2777	0/0:20,0:20:51.10:0,51,983	0/0:36,0:36:93.31:0,93,2184	0/0:37,0:37:99:0,111,2466	0/0:17,0:17:45.10:0,45,925	0/0:41,0:41:99:0,111,2634	0/0:30,0:30:84.21:0,84,1840	0/0:38,0:38:99:0,111,2583	0/0:33,0:33:96.26:0,96,2129	0/0:22,0:22:66.23:0,66,1531	1/1:14,12:26:6.77:476,7,0	0/0:28,0:28:81.17:0,81,1752	0/0:19,0:19:57.20:0,57,1356	0/0:19,0:19:54.19:0,54,1215	0/0:82,0:82:99:0,211,4879	0/0:28,0:28:75.22:0,75,1743	0/0:20,0:20:57.03:0,57,1286	0/0:41,0:41:99:0,114,2623	0/0:30,0:30:84.29:0,84,1988	0/0:25,0:25:69.22:0,69,1607	0/0:24,0:24:66.21:0,66,1532	0/0:17,0:17:51.17:0,51,1191
chr10	5856221	.	CAG	C	3166.34	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=13.632;DP=692;FS=0.964;HRun=0;HaplotypeScore=95.0944;InbreedingCoeff=0.9955;MQ=81.18;MQ0=0;MQRankSum=-5.989;QD=42.22;ReadPosRankSum=2.574;VQSLOD=5.4019;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,49:49:99:2244,144,0	0/0:15,0:15:45.12:0,45,836	0/0:24,0:24:72.23:0,72,1382	0/0:23,0:23:60.11:0,60,1105	0/0:18,0:18:54.17:0,54,1043	0/0:17,0:17:51.18:0,51,1029	0/0:27,0:27:81.26:0,81,1594	0/0:35,0:35:99:0,102,1999	0/0:24,0:24:72.23:0,72,1412	0/0:24,0:24:69.23:0,69,1355	0/0:7,0:7:18.06:0,18,365	0/0:25,0:25:75.22:0,75,1449	0/0:28,0:28:84.27:0,84,1664	0/0:27,0:27:81.28:0,81,1635	0/0:36,0:36:99:0,108,2165	0/0:27,0:27:81.28:0,81,1639	1/1:0,26:26:66.22:1044,66,0	0/0:21,0:21:63.17:0,63,1236	0/0:12,0:12:36.09:0,36,676	0/0:18,0:18:48.15:0,48,936	0/0:41,0:41:99:0,120,2357	0/0:32,0:32:96.33:0,96,1948	0/0:21,0:21:63.22:0,63,1267	0/0:32,0:32:96.29:0,96,1847	0/0:17,0:17:51.18:0,51,1034	0/0:30,0:30:84.28:0,84,1674	0/0:26,0:26:78.27:0,78,1557	0/0:10,0:10:30.10:0,30,595
chr10	5856383	.	CT	C	2104.51	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=11.985;DP=692;FS=6.313;HRun=4;HaplotypeScore=93.6013;InbreedingCoeff=0.9951;MQ=89.48;MQ0=0;MQRankSum=-7.253;QD=30.06;ReadPosRankSum=-0.060;VQSLOD=3.3215;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,35:37:99:1185,99,0	0/0:13,0:13:36.11:0,36,489	0/0:38,0:38:61.27:0,61,1188	0/0:15,0:15:36.07:0,36,450	0/0:22,0:22:66.21:0,66,903	0/0:17,0:17:51.17:0,51,714	0/0:33,0:33:96.31:0,96,1320	0/0:29,0:29:69.22:0,69,938	0/0:24,0:24:72.23:0,72,993	0/0:43,0:43:99:0,129,1759	0/0:14,0:14:36.11:0,36,489	0/0:28,0:28:84.28:0,84,1176	0/0:27,0:27:81.25:0,81,1099	0/0:18,0:18:54.18:0,54,756	0/0:28,0:28:81.24:0,81,1099	0/0:33,0:33:96.31:0,96,1329	1/1:2,31:33:87.27:1041,87,0	0/0:24,0:24:63.21:0,63,882	0/0:16,0:16:45.12:0,45,594	0/0:10,0:10:27.09:0,27,378	0/0:35,0:35:99:0,99,1385	0/0:22,0:22:66.21:0,66,909	0/0:18,0:18:51.15:0,51,683	0/0:35,0:35:99:0,102,1422	0/0:24,0:24:69.23:0,69,963	0/0:32,0:32:96.30:0,96,1311	0/0:18,0:18:54.17:0,54,740	0/0:6,0:6:18.03:0,18,219
chr10	5856413	.	C	CCCGT	3549.51	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=3.470;DP=667;FS=1.150;HRun=0;HaplotypeScore=122.5398;InbreedingCoeff=0.9914;MQ=88.95;MQ0=0;MQRankSum=-9.375;QD=58.19;ReadPosRankSum=-2.121;VQSLOD=4.7109;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,22:30:75.17:1869,75,0	0/0:12,0:12:30.10:0,30,558	0/0:31,0:31:73.79:0,74,1265	0/0:20,0:20:38.59:0,39,682	0/0:20,0:20:51.17:0,51,950	0/0:19,0:19:51.15:0,51,918	0/0:39,0:39:99:0,117,2147	0/0:22,0:22:54.17:0,54,972	0/0:27,0:27:78.25:0,78,1425	0/0:38,0:38:99:0,111,2043	0/0:12,0:12:36.11:0,36,630	0/0:19,0:19:51.13:0,51,908	0/0:29,0:29:87.28:0,87,1580	0/0:19,0:19:51.15:0,51,882	0/0:29,0:29:81.26:0,81,1474	0/0:34,0:34:99:0,99,1804	1/1:6,24:31:69.19:1680,69,0	0/0:25,0:25:66.21:0,66,1201	0/0:14,0:14:36.11:0,36,641	0/0:13,0:13:39.12:0,39,697	0/0:33,0:33:99:0,99,1792	0/0:24,0:24:60.21:0,60,1109	0/0:18,0:18:39.12:0,39,696	0/0:29,0:29:87.30:0,87,1603	0/0:25,0:25:63.22:0,63,1175	0/0:30,0:30:78.26:0,78,1418	0/0:20,0:20:60.19:0,60,1077	0/0:5,0:5:15.05:0,15,260
chr10	5856825	.	CA	C	22843.22	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-0.782;DP=658;FS=17.175;HRun=1;HaplotypeScore=71.2192;InbreedingCoeff=0.9989;MQ=81.67;MQ0=1;MQRankSum=-9.796;QD=36.67;ReadPosRankSum=6.162;VQSLOD=3.0570;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,38:38:84.28:1169,84,0	1/1:0,10:10:30.10:418,30,0	0/0:12,0:13:34.33:0,34,500	0/0:22,0:22:66.02:0,66,914	1/1:0,22:22:47.78:607,48,0	1/1:0,22:22:42.14:584,42,0	1/1:0,30:30:81.27:1129,81,0	1/1:0,21:21:62.81:718,63,0	1/1:0,27:27:78.26:1087,78,0	1/1:0,22:22:63.13:837,63,0	1/1:0,22:22:54.13:728,54,0	1/1:0,23:23:63.21:870,63,0	1/1:0,26:26:75.21:1043,75,0	1/1:0,22:22:57.19:794,57,0	1/1:0,19:19:54.18:752,54,0	1/1:0,24:24:69.23:962,69,0	1/1:1,33:33:87.29:1212,87,0	1/1:0,31:31:84.28:1169,84,0	1/1:0,24:24:72.13:976,72,0	1/1:2,13:15:39.09:520,39,0	1/1:0,45:45:99:1627,117,0	1/1:0,19:19:51.17:711,51,0	1/1:0,10:10:27.09:376,27,0	1/1:0,29:29:78.26:1088,78,0	1/1:0,19:19:51.17:710,51,0	1/1:0,30:30:87.26:1176,87,0	1/1:0,28:28:81.27:1125,81,0	1/1:0,11:11:33.11:460,33,0
chr10	5858423	.	T	TA	151.11	PASS	AC=8;AF=0.211;AN=38;BaseQRankSum=3.860;DP=490;FS=6.361;HRun=0;HaplotypeScore=52.9141;InbreedingCoeff=0.8014;MQ=35.23;MQ0=142;MQRankSum=-3.796;QD=13.74;ReadPosRankSum=1.734;VQSLOD=4.5855;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,1:32:44.99:0,45,560	./.	./.	./.	./.	0/0:31,0:28:45.10:0,45,606	0/0:21,0:18:36.08:0,36,479	0/0:28,0:23:69.22:0,69,947	0/0:29,0:26:54.14:0,54,732	1/1:2,2:1:3.01:48,3,0	./.	./.	./.	./.	0/0:27,0:19:45.07:0,45,588	0/0:33,0:31:66.21:0,66,904	0/0:17,0:16:30.06:0,30,397	1/1:0,1:1:3.01:48,3,0	0/0:16,0:13:39.13:0,39,543	0/0:31,0:27:38.99:0,39,492	1/1:0,4:3:9.03:125,9,0	0/0:28,0:28:56.88:0,57,697	1/1:0,2:1:3.01:48,3,0	./.	0/0:29,0:21:33.11:0,33,461	0/0:20,1:14:42.13:0,42,571	0/0:21,0:18:33.07:0,33,436	0/0:16,0:7:21.07:0,21,294
chr10	5858474	.	T	TC	332.74	PASS	AB=0.824;AC=11;AF=0.262;AN=42;BaseQRankSum=6.630;DP=503;FS=11.414;HRun=2;HaplotypeScore=46.8980;InbreedingCoeff=0.6761;MQ=28.59;MQ0=178;MQRankSum=-4.404;QD=7.56;ReadPosRankSum=-0.415;VQSLOD=-0.6107;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:22:12.04:0,12,149	1/1:2,3:3:5.95:52,6,0	./.	./.	1/1:1,11:11:17.87:169,18,0	0/0:28,0:22:21.07:0,21,260	0/0:23,0:9:6.02:0,6,74	0/0:20,0:18:54.12:0,54,630	0/0:32,0:25:45.14:0,45,558	0/1:11,3:6:59.31:88,0,59	1/1:1,5:4:9.01:86,9,0	1/1:1,2:2:5.95:50,6,0	./.	./.	0/0:22,0:16:27.07:0,27,322	0/0:20,0:17:27.08:0,27,335	0/0:17,0:14:18.06:0,18,223	0/0:1,0:1:2.97:0,3,20	0/0:17,0:9:27.08:0,27,334	0/0:36,0:27:33.10:0,33,408	1/1:4,0:1:3.01:30,3,0	0/0:19,0:17:27.08:0,27,334	./.	./.	0/0:26,0:15:21.07:0,21,260	0/0:17,0:8:24.06:0,24,285	0/0:22,0:17:9.03:0,9,112	./.
chr10	5858480	.	AC	A	468.54	PASS	AB=0.882;AC=11;AF=0.275;AN=40;BaseQRankSum=6.872;DP=484;FS=21.382;HRun=1;HaplotypeScore=50.4079;InbreedingCoeff=0.7513;MQ=31.15;MQ0=154;MQRankSum=-4.350;QD=9.97;ReadPosRankSum=0.224;VQSLOD=-0.2671;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:23:15.05:0,15,239	1/1:2,3:3:8.92:86,9,0	./.	./.	1/1:5,7:11:18.02:225,18,0	0/0:29,0:24:27.08:0,27,408	0/0:25,0:11:15.05:0,15,230	0/0:20,0:18:54.18:0,54,860	0/0:33,0:27:51.17:0,51,805	0/1:13,2:7:67.49:67,0,128	1/1:2,5:5:12:144,12,0	1/1:1,2:2:6.02:71,6,0	./.	./.	0/0:23,0:18:39.10:0,39,576	0/0:22,0:20:36.12:0,36,565	0/0:15,0:12:24.08:0,24,383	./.	0/0:16,0:9:27.08:0,27,409	0/0:35,0:26:42.14:0,42,666	./.	0/0:21,0:19:36.11:0,36,552	1/1:4,1:3:2.97:20,3,0	./.	0/0:23,0:14:24.08:0,24,384	0/0:13,0:6:18.06:0,18,279	0/0:21,0:17:9.03:0,9,144	./.
chr10	5858676	.	T	TA	597.70	PASS	AC=14;AF=0.538;AN=26;BaseQRankSum=4.683;DP=235;FS=0.000;HRun=0;HaplotypeScore=28.0738;InbreedingCoeff=0.5647;MQ=17.50;MQ0=125;MQRankSum=-2.350;QD=12.20;ReadPosRankSum=-2.383;VQSLOD=3.1668;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:13:4.56:0,5,46	1/1:0,3:2:3.01:44,3,0	./.	./.	./.	./.	./.	./.	0/0:2,3:2:3.01:0,3,42	1/1:0,7:3:3.01:48,3,0	./.	1/1:1,12:9:20.87:240,21,0	1/1:0,7:5:11.97:157,12,0	1/1:3,11:9:14.98:199,15,0	./.	0/0:8,1:7:8.85:0,9,104	0/0:7,0:2:1.55:0,2,4	1/1:0,1:1:2.94:18,3,0	./.	./.	./.	./.	./.	1/1:0,4:3:1.25:3,1,0	./.	0/0:10,0:7:21.03:0,21,271	./.	0/0:8,0:1:3.01:0,3,42
chr10	5858727	.	T	TC	1635.11	PASS	AB=0.817;AC=22;AF=0.524;AN=42;BaseQRankSum=7.453;DP=460;FS=0.000;HRun=2;HaplotypeScore=61.3660;InbreedingCoeff=0.2252;MQ=22.39;MQ0=183;MQRankSum=-4.165;QD=6.81;ReadPosRankSum=2.459;VQSLOD=0.8618;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	1/1:12,0:7:4.82:37,5,0	0/1:14,4:10:21.92:22,0,86	./.	./.	0/1:11,2:11:21.92:22,0,86	0/1:19,0:8:81.98:82,0,128	./.	1/1:25,0:14:30.09:349,30,0	1/1:12,1:6:15.04:179,15,0	1/1:29,1:20:45.13:520,45,0	0/0:19,1:16:3.01:0,3,37	0/0:17,2:14:12.04:0,12,149	0/0:13,0:5:3.01:0,3,37	1/1:5,0:2:6.02:64,6,0	0/0:16,3:6:12.04:0,12,149	0/1:11,7:14:18.90:19,0,133	1/1:23,4:11:12.03:138,12,0	0/1:5,11:12:27.99:57,0,28	1/1:11,0:10:9.03:104,9,0	0/1:17,2:12:22.07:117,0,22	1/1:6,8:6:8.39:78,8,0	0/0:9,0:6:15.05:0,15,186	0/0:5,0:2:6.02:0,6,74	0/0:8,0:1:3.01:0,3,37
chr10	5858729	.	C	CG	1931.45	PASS	AB=0.922;AC=20;AF=0.476;AN=42;BaseQRankSum=7.399;DP=468;FS=4.016;HRun=0;HaplotypeScore=61.3095;InbreedingCoeff=0.3050;MQ=22.65;MQ0=189;MQRankSum=-4.733;QD=8.58;ReadPosRankSum=3.918;VQSLOD=3.0766;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	1/1:9,3:7:5.91:60,6,0	0/1:19,0:11:3.09:3,0,113	./.	./.	0/1:13,0:11:3.09:3,0,113	0/1:15,4:8:99:120,0,146	./.	1/1:10,15:14:30.10:470,30,0	1/1:6,7:6:15.03:211,15,0	1/1:13,17:20:45.13:679,45,0	0/0:20,0:16:3.01:0,3,42	0/0:20,0:15:17.35:0,17,193	0/0:13,0:5:6:0,6,66	1/1:2,3:2:6.02:95,6,0	0/0:17,0:5:12.04:0,12,168	0/0:18,0:14:5.90:0,6,203	1/1:20,8:12:11.69:94,12,0	0/1:16,0:12:17.24:17,0,39	1/1:8,3:10:9.03:141,9,0	0/1:11,8:12:26.76:168,0,27	0/1:15,0:7:17.08:22,0,17	0/0:8,0:5:15.05:0,15,209	0/0:5,0:2:6.02:0,6,84	0/0:8,0:1:3.01:0,3,42
chr10	5858978	.	TC	T	760.72	PASS	AB=0.719;AC=8;AF=0.143;AN=56;BaseQRankSum=1.873;DP=910;FS=26.881;HRun=3;HaplotypeScore=256.4181;InbreedingCoeff=0.5978;MQ=54.59;MQ0=28;MQRankSum=-6.819;QD=16.19;ReadPosRankSum=-0.500;VQSLOD=-0.0007;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:20:35.68:0,36,343	0/0:24,0:22:57.16:0,57,771	0/0:41,0:32:93.28:0,93,1269	0/0:38,1:28:84.24:0,84,1101	0/0:52,0:51:99:0,104,1373	0/0:32,0:32:78.19:0,78,870	0/0:21,0:15:20.99:0,21,205	1/1:5,17:19:33.17:628,33,0	0/0:28,0:27:63.02:0,63,616	0/0:74,1:71:99:0,132,2206	0/0:52,0:51:99:0,99,1312	0/0:39,1:39:99:0,99,1256	0/0:49,2:47:74.10:0,74,1428	0/0:59,2:60:75.92:0,76,1789	0/0:33,0:32:71.87:0,72,687	0/0:24,0:23:48.06:0,48,501	0/1:6,1:7:25.12:25,0,76	0/0:18,0:16:39.13:0,39,537	0/0:12,0:11:27:0,27,246	0/0:29,0:29:9.03:0,9,117	0/0:79,0:75:99:0,192,2510	0/0:23,0:23:9.02:0,9,105	0/0:50,0:47:99:0,108,1446	0/0:49,0:47:80.97:0,81,1087	0/0:7,0:7:14.99:0,15,156	0/1:2,7:5:31.18:99,0,31	1/1:0,7:4:9.03:111,9,0	1/1:0,2:2:3.01:37,3,0
chr10	5858983	.	GC	G	578.53	PASS	AB=0.781;AC=12;AF=0.214;AN=56;BaseQRankSum=8.098;DP=838;FS=189.011;HRun=1;HaplotypeScore=237.0091;InbreedingCoeff=0.1043;MQ=56.94;MQ0=7;MQRankSum=-2.145;QD=2.77;ReadPosRankSum=1.880;VQSLOD=-0.5597;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:20:35.70:0,36,345	0/0:21,0:20:57.18:0,57,857	0/0:38,0:34:99:0,102,1584	0/0:40,0:32:96.32:0,96,1498	0/0:49,0:48:99:0,104,1503	0/1:23,9:32:99:163,0,383	0/1:14,2:14:23.16:23,0,111	0/0:24,0:21:62.93:0,63,585	0/1:22,4:25:11.20:11,0,432	0/0:62,0:60:99:0,153,2210	0/0:41,0:41:93.30:0,93,1414	0/0:34,3:36:26.89:0,27,1220	0/0:44,1:44:88.16:0,88,1643	0/0:57,1:58:99:0,125,2174	0/1:22,11:32:99:161,0,318	0/1:16,8:23:99:111,0,253	0/1:3,4:7:33.54:34,0,34	0/1:12,2:14:9.89:10,0,441	0/0:11,0:11:22.78:0,23,180	1/1:25,3:28:9:81,9,0	0/0:72,3:73:97.40:0,97,2562	1/1:19,3:22:8.99:76,9,0	0/0:41,0:39:99:0,102,1443	0/0:41,2:42:37.04:0,37,1128	0/1:4,3:7:37.27:62,0,37	0/0:10,0:6:14.98:0,15,142	0/0:9,0:6:14.70:0,15,141	0/0:2,0:2:2.97:0,3,20
chr10	5860131	.	ATGTG	A	5696.68	PASS	AB=0.925;AC=24;AF=0.429;AN=56;BaseQRankSum=8.946;DP=698;FS=3.114;HRun=0;HaplotypeScore=156.9190;InbreedingCoeff=0.8400;MQ=55.55;MQ0=15;MQRankSum=2.546;QD=19.58;ReadPosRankSum=4.781;VQSLOD=4.7830;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:30:9.01:0,9,109	1/1:4,9:13:21.07:342,21,0	0/0:59,0:21:12.04:0,12,280	0/0:59,0:24:21.06:0,21,383	1/1:5,11:18:11.96:175,12,0	0/0:20,0:22:41.79:0,42,785	0/0:20,0:25:35.33:0,35,691	0/0:32,0:32:41.96:0,42,695	0/0:30,0:31:74.99:0,75,1738	1/1:10,7:17:21.05:316,21,0	1/1:11,7:21:18.05:273,18,0	1/1:5,12:18:35.16:565,35,0	1/1:5,20:26:51.17:811,51,0	1/1:4,21:27:44.39:827,44,0	0/0:19,0:24:53.39:0,53,1129	0/1:15,1:17:3.62:4,0,885	0/0:10,0:17:12.04:0,12,185	1/1:8,8:17:22.77:368,23,0	0/0:19,0:17:36.08:0,36,762	0/0:19,0:21:45.15:0,45,1027	1/1:13,19:34:13.57:514,14,0	0/0:11,0:14:32.58:0,33,585	1/1:11,19:35:50.49:800,50,0	1/1:10,17:27:42.14:686,42,0	0/0:21,0:26:50.64:0,51,1061	0/1:19,1:19:16.01:16,0,330	0/0:18,0:18:9.03:0,9,164	0/0:9,0:9:14.95:0,15,168
chr10	5860172	.	TG	T	1746.88	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=4.685;DP=599;FS=3.173;HRun=5;HaplotypeScore=124.2137;InbreedingCoeff=0.9319;MQ=73.24;MQ0=2;MQRankSum=0.569;QD=25.32;ReadPosRankSum=-3.330;VQSLOD=1.2527;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:54.90:0,55,660	0/0:12,0:12:29.90:0,30,340	0/0:19,0:14:35.44:0,35,406	0/0:33,0:27:74.15:0,74,917	0/0:21,0:21:35.69:0,36,458	0/0:19,0:19:54.18:0,54,739	0/0:26,0:26:75.23:0,75,1009	1/1:6,21:27:63.18:714,63,0	0/0:36,0:36:99:0,102,1361	0/0:14,0:14:36.11:0,36,474	0/0:14,0:14:26.67:0,27,353	0/0:20,0:20:57.17:0,57,750	0/0:29,0:29:68.87:0,69,939	0/0:29,0:29:75.19:0,75,973	0/0:21,0:21:60.17:0,60,802	0/0:20,0:20:57.19:0,57,780	0/0:11,0:11:27.06:0,27,348	0/0:15,0:15:42.14:0,42,574	0/0:28,0:28:66.22:0,66,901	0/0:17,0:17:48.16:0,48,656	0/0:32,0:32:66.15:0,66,849	0/0:16,0:16:48.16:0,48,646	0/0:28,0:28:66.14:0,66,858	0/0:24,0:24:54.11:0,54,700	0/0:20,0:20:57.19:0,57,779	1/1:2,13:14:1.07:401,1,0	1/1:0,14:14:30.09:340,30,0	1/1:0,13:13:39.11:441,39,0
chr10	5860889	.	CTCCTA	C	4753.85	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=11.205;DP=690;FS=0.000;HRun=0;HaplotypeScore=131.6113;InbreedingCoeff=0.9496;MQ=84.07;MQ0=0;MQRankSum=-6.016;QD=60.95;ReadPosRankSum=-1.026;VQSLOD=5.0741;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:81.28:0,81,2564	0/0:22,0:22:66.23:0,66,2081	0/0:24,0:24:72.25:0,72,2259	0/0:24,0:24:43.71:0,44,1574	0/0:23,0:22:69.24:0,69,2142	0/0:30,0:30:90.31:0,90,2997	0/0:24,0:24:72.25:0,72,2381	1/1:0,27:27:78.26:1727,78,0	0/0:27,0:27:81.28:0,81,2598	0/0:29,0:29:87.29:0,87,2726	0/0:17,0:17:51.18:0,51,1656	0/0:30,0:30:87.28:0,87,2759	0/0:32,0:32:96.32:0,96,3060	0/0:27,0:27:81.28:0,81,2605	0/0:39,0:39:99:0,117,3799	0/0:25,0:25:75.26:0,75,2498	0/0:23,0:23:69.24:0,69,2213	0/0:12,0:12:36.12:0,36,1156	0/0:23,0:23:69.23:0,69,2070	0/0:32,0:32:93.30:0,93,2958	0/0:29,0:29:87.30:0,87,2776	0/0:36,0:36:99:0,108,3469	0/0:17,0:17:48.16:0,48,1599	0/0:18,0:18:54.19:0,54,1755	0/0:18,0:18:54.17:0,54,1667	1/1:0,20:20:54.19:1210,54,0	1/1:0,28:28:75.26:1747,75,0	1/1:0,3:3:3.01:70,3,0
chr10	5862610	.	C	CA	2878.08	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=13.910;DP=569;FS=13.946;HRun=6;HaplotypeScore=68.9040;InbreedingCoeff=0.9821;MQ=57.97;MQ0=0;MQRankSum=-1.041;QD=29.67;ReadPosRankSum=-3.202;VQSLOD=1.7801;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:72.16:0,72,734	0/0:8,0:8:24.04:0,24,238	0/0:21,0:13:16.87:0,17,165	0/0:6,0:5:12.01:0,12,111	0/0:34,0:34:96.19:0,96,971	0/0:34,0:34:84.19:0,84,855	0/0:22,0:22:54.10:0,54,542	1/1:2,22:21:54.14:651,54,0	0/0:12,0:12:36.08:0,36,367	0/0:36,0:36:96.21:0,96,980	0/0:29,0:29:69.15:0,69,704	0/0:24,0:24:54.12:0,54,551	0/0:13,0:13:39.09:0,39,398	0/0:10,0:10:30.07:0,30,306	0/0:15,0:15:42.10:0,42,429	0/0:18,0:18:54.12:0,54,550	0/0:19,0:19:45.10:0,45,459	0/0:15,0:16:42.53:0,43,420	0/0:9,0:8:15.03:0,15,153	0/0:19,0:19:54.11:0,54,545	0/0:16,0:16:39.09:0,39,398	0/0:22,0:22:66.14:0,66,667	0/0:28,0:28:78.16:0,78,789	0/0:11,0:11:30.07:0,30,306	0/0:21,0:21:63.11:0,63,629	1/1:1,25:26:75.20:915,75,0	1/1:2,36:38:96.28:1207,96,0	1/1:2,7:9:21.07:264,21,0
chr10	5863549	.	TG	T	4027.16	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=14.487;DP=683;FS=0.793;HRun=2;HaplotypeScore=91.8684;InbreedingCoeff=0.9999;MQ=73.65;MQ0=0;MQRankSum=-9.202;QD=36.61;ReadPosRankSum=-0.859;VQSLOD=3.5665;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,108,1527	0/0:12,0:12:36.12:0,36,539	0/0:30,0:29:81.26:0,81,1180	0/0:23,0:22:50.76:0,51,746	0/0:32,0:32:95.91:0,96,1397	0/0:26,0:26:75.25:0,75,1124	0/0:17,0:17:39.12:0,39,584	1/1:0,26:26:78.25:1001,78,0	0/0:22,0:22:66.22:0,66,970	0/0:19,0:19:57.18:0,57,833	0/0:19,0:19:54.18:0,54,808	0/0:20,0:20:60.19:0,60,878	0/0:38,0:38:99:0,111,1621	0/0:21,0:21:63.19:0,63,906	0/0:37,0:37:99:0,105,1533	0/0:23,0:23:69.23:0,69,1032	0/0:27,0:27:81.25:0,81,1190	0/0:25,0:25:72.23:0,72,1054	0/0:15,0:15:45.12:0,45,632	0/0:28,0:28:84.23:0,84,1175	0/0:16,0:16:48.15:0,48,696	0/0:18,0:18:54.15:0,54,767	0/0:25,0:25:66.21:0,66,965	0/0:18,0:18:51.17:0,51,764	0/0:21,0:21:63.20:0,63,923	1/1:1,33:34:57.36:1233,57,0	1/1:0,28:28:78.25:1007,78,0	1/1:0,22:22:63.16:787,63,0
chr10	5863610	.	CAACATAT	C	3942.47	PASS	AB=0.552;AC=7;AF=0.125;AN=56;BaseQRankSum=11.260;DP=653;FS=1.763;HRun=0;HaplotypeScore=151.9358;InbreedingCoeff=0.8315;MQ=54.36;MQ0=7;MQRankSum=-11.154;QD=45.84;ReadPosRankSum=1.460;VQSLOD=3.8253;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,105,3895	0/0:12,0:11:33.11:0,33,1309	0/0:12,0:9:24.04:0,24,692	0/0:18,0:14:33.11:0,33,1071	0/0:32,0:31:90.28:0,90,3475	0/0:20,0:20:60.21:0,60,2294	0/0:26,0:26:75.26:0,75,2794	1/1:7,16:20:18.06:452,18,0	0/0:27,0:27:78.27:0,78,3071	0/0:25,0:25:69.24:0,69,2672	0/0:25,0:25:75.26:0,75,2970	0/0:20,0:20:60.21:0,60,2340	0/0:27,0:27:72.25:0,72,2850	0/0:21,0:21:63.22:0,63,2478	0/0:32,0:32:90.30:0,90,3422	0/0:22,0:22:60.16:0,60,2111	0/0:32,0:31:90.31:0,90,3488	0/0:20,0:19:51.18:0,51,1983	0/0:12,0:10:27.09:0,27,1071	0/0:38,0:37:99:0,108,4263	0/0:23,0:23:66.20:0,66,2448	0/0:22,0:22:66.23:0,66,2558	0/0:21,0:21:63.22:0,63,2441	0/0:14,0:14:42.14:0,42,1628	0/0:25,0:25:69.24:0,69,2714	0/1:6,26:31:37.77:1919,0,38	1/1:4,14:18:42.14:1071,42,0	1/1:4,9:13:21.07:500,21,0
chr10	5866595	.	C	CCAGCAGCAG	2956.05	PASS	AB=1.000;AC=21;AF=0.750;AN=28;BaseQRankSum=-4.841;DP=467;FS=6.355;HRun=0;HaplotypeScore=132.8168;InbreedingCoeff=0.3612;MQ=76.31;MQ0=4;MQRankSum=-4.130;QD=10.05;ReadPosRankSum=-2.211;VQSLOD=1.8407;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	0/1:22,0:20:0:0,0,0	./.	1/1:10,0:9:0.47:1,0,0	1/1:34,0:34:23.93:225,24,0	./.	0/1:15,0:15:18.97:52,0,19	./.	./.	1/1:26,11:44:9.03:357,9,0	1/1:12,6:26:3.48:135,3,0	1/1:33,0:33:27.04:653,27,0	1/1:18,0:18:18.03:335,18,0	0/1:14,0:14:23.54:46,0,24	0/0:32,0:32:26.35:0,26,232	1/1:17,0:17:20.97:453,21,0	./.	./.	0/0:24,0:23:0:0,0,0	./.	./.	1/1:14,0:31:14.24:186,14,0	./.	./.	1/1:30,0:28:29.35:617,29,0	./.
chr10	5866646	.	G	GCAGCAA	4333.78	PASS	AB=0.904;AC=33;AF=0.611;AN=54;BaseQRankSum=2.943;DP=491;FS=2.591;HRun=0;HaplotypeScore=109.0752;InbreedingCoeff=0.5455;MQ=57.63;MQ0=15;MQRankSum=-1.951;QD=11.78;ReadPosRankSum=-0.635;VQSLOD=3.9125;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:18:45.06:363,45,0	0/0:3,0:3:4.59:0,5,20	0/0:21,0:18:48.01:0,48,466	0/0:17,0:15:37.89:0,38,342	0/0:6,0:6:8.60:0,9,53	1/1:15,0:14:29.85:236,30,0	1/1:35,0:34:73.03:624,73,0	1/1:10,0:9:24.02:223,24,0	0/1:2,22:26:16.45:101,0,16	0/0:9,0:9:21.01:0,21,192	./.	0/1:29,0:29:87.65:88,0,316	0/1:29,0:29:30.33:30,0,279	0/0:38,0:38:45.75:0,46,496	1/1:1,22:25:17.88:605,18,0	1/1:4,8:14:15.97:215,16,0	1/1:0,0:37:42.03:398,42,0	0/1:16,0:16:34:34,0,139	1/1:14,0:12:28.22:210,28,0	1/1:7,0:7:15.23:100,15,0	0/0:20,0:16:38.09:0,38,305	1/1:4,0:4:6.43:46,6,0	0/0:5,0:5:8.99:0,9,74	0/1:35,0:36:99:132,0,268	1/1:9,0:8:17.94:149,18,0	1/1:9,0:5:11.91:88,12,0	1/1:23,0:21:47.84:446,48,0	1/1:10,0:10:29.94:247,30,0
chr10	5866977	.	CTGTGTGTGTGTGTGTG	C	5056.01	PASS	AB=0.785;AC=27;AF=0.519;AN=52;BaseQRankSum=8.498;DP=598;FS=12.212;HRun=0;HaplotypeScore=234.4358;InbreedingCoeff=0.3424;MQ=65.23;MQ0=7;MQRankSum=-5.898;QD=15.75;ReadPosRankSum=-1.507;VQSLOD=2.2262;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:39:30.08:0,30,1616	1/1:5,2:7:6.02:262,6,0	./.	./.	1/1:12,5:17:12.43:360,12,0	0/1:13,1:14:63.94:119,0,64	0/1:18,1:19:28.32:123,0,28	0/0:23,0:23:19.99:0,20,498	0/1:15,0:30:3.85:352,0,4	1/1:18,0:18:7.86:58,8,0	1/1:8,6:14:9.03:231,9,0	1/1:12,8:22:5.32:788,5,0	1/1:18,6:24:15.05:631,15,0	1/1:21,3:27:4.94:541,5,0	1/1:8,0:16:18.09:382,18,0	0/0:22,0:22:26.87:0,27,216	0/0:32,0:32:39.06:0,39,904	0/1:11,4:15:93.79:121,0,94	0/0:17,0:17:5.96:0,6,46	0/1:9,0:15:12.88:180,0,13	0/0:32,0:33:3.44:0,3,26	0/1:18,0:27:38.77:184,0,39	1/1:10,0:10:3.01:46,3,0	0/1:18,12:30:5.96:245,0,6	1/1:9,2:14:15.05:433,15,0	0/0:20,0:22:25.63:0,26,816	0/0:26,0:26:39.59:0,40,1590	0/0:7,0:7:6.91:0,7,267
chr10	5868602	.	GTT	G	3476.16	PASS	AB=0.614;AC=27;AF=0.482;AN=56;BaseQRankSum=9.532;DP=645;FS=6.096;HRun=14;HaplotypeScore=101.8665;InbreedingCoeff=0.9165;MQ=62.09;MQ0=0;MQRankSum=1.000;QD=10.66;ReadPosRankSum=5.268;VQSLOD=2.5192;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:13,3:35:44.21:44,0,207	0/0:11,0:11:26.63:0,27,310	0/0:26,0:15:12.63:0,13,167	0/0:26,0:22:26.70:0,27,228	0/0:36,0:36:96.22:0,96,1218	0/0:13,0:32:50.02:0,50,262	1/1:2,9:11:20.97:194,21,0	1/1:14,0:37:49.86:220,50,0	1/1:5,15:21:35.69:317,36,0	0/0:25,0:27:57.14:0,57,721	0/0:24,0:26:60.90:0,61,705	0/0:21,0:21:57.11:0,57,692	0/0:16,0:18:45.02:0,45,554	0/0:11,0:11:27.07:0,27,360	1/1:3,23:26:54.02:500,54,0	1/1:3,18:22:38.73:344,39,0	1/1:2,0:24:49.38:213,49,0	0/0:16,0:18:47.54:0,48,557	1/1:7,10:19:11.60:205,12,0	1/1:4,22:27:38.55:407,39,0	0/0:17,0:21:54.87:0,55,607	1/1:2,10:12:14.79:139,15,0	0/0:20,0:20:51.15:0,51,683	0/0:20,0:21:45.49:0,45,564	1/1:6,10:16:23.60:205,24,0	1/1:5,0:35:73.95:320,74,0	1/1:2,0:21:46.64:202,47,0	1/1:2,0:19:38.40:166,38,0
chr10	5871402	.	A	AT	2845.47	PASS	AB=0.569;AC=7;AF=0.125;AN=56;BaseQRankSum=-12.250;DP=645;FS=0.000;HRun=7;HaplotypeScore=60.6921;InbreedingCoeff=0.8925;MQ=71.91;MQ0=0;MQRankSum=-0.593;QD=25.18;ReadPosRankSum=-1.777;VQSLOD=3.3202;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,108,1037	0/0:13,0:13:36.04:0,36,341	0/0:19,0:19:45.52:0,46,429	0/0:12,0:12:26.97:0,27,245	0/0:25,0:24:72.11:0,72,695	0/0:13,0:13:36.06:0,36,348	0/0:28,0:28:75.09:0,75,713	1/1:8,27:35:81.24:967,81,0	0/0:22,0:22:63.10:0,63,608	0/0:32,0:32:90.12:0,90,862	0/0:14,0:14:42.05:0,42,399	0/0:23,0:23:57.05:0,57,539	0/0:24,0:24:60.05:0,60,564	0/0:23,0:23:60.08:0,60,574	0/0:36,0:36:93.11:0,93,887	0/0:26,0:26:72.11:0,72,695	0/0:20,0:20:51.06:0,51,486	0/0:14,0:14:39.02:0,39,368	0/0:19,0:19:48.06:0,48,454	0/0:27,0:27:71.85:0,72,678	0/0:21,0:21:63.09:0,63,604	0/0:23,0:23:66.03:0,66,622	0/0:21,0:21:57.05:0,57,537	0/0:21,0:21:51.07:0,51,492	0/0:18,0:18:54.09:0,54,521	0/1:8,25:33:2.71:793,0,3	1/1:1,35:36:87.27:1051,87,0	1/1:1,8:9:15.05:181,15,0
chr10	5872387	.	AAGAGACAG	A	6248.75	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=13.918;DP=762;FS=9.082;HRun=0;HaplotypeScore=205.7278;InbreedingCoeff=0.9448;MQ=56.81;MQ0=13;MQRankSum=-10.706;QD=24.41;ReadPosRankSum=-3.992;VQSLOD=2.8136;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:84.02:0,84,2613	1/1:0,9:9:17.90:237,18,0	0/0:38,0:19:37.23:0,37,878	0/0:36,0:17:22.94:0,23,408	1/1:5,29:34:71.56:903,72,0	0/0:29,0:27:66.18:0,66,2354	0/0:19,0:20:39.10:0,39,1230	0/0:32,0:32:57.16:0,57,1686	0/0:30,0:30:78.21:0,78,2672	1/1:9,18:27:54.16:1181,54,0	1/1:6,16:22:32.77:394,33,0	1/1:3,25:28:38.87:668,39,0	1/1:4,25:29:50.96:1023,51,0	1/1:5,18:23:39:831,39,0	0/0:36,0:36:84.25:0,84,3263	0/0:29,0:29:72.21:0,72,2726	0/0:22,0:22:60.17:0,60,2009	1/1:11,12:24:1.36:255,1,0	0/0:23,0:22:45.10:0,45,1261	0/0:37,1:37:58.22:0,58,2497	1/1:3,11:14:12.34:81,12,0	0/0:28,0:27:57.20:0,57,2263	1/1:10,21:31:45.24:650,45,0	1/1:6,9:15:5.27:27,5,0	0/0:28,0:27:60.17:0,60,2249	0/0:30,0:30:87.27:0,87,3093	0/0:34,0:34:78.25:0,78,2933	0/0:19,0:19:54.19:0,54,2153
chr10	5872930	.	CGAAGA	C	288.36	PASS	AC=6;AF=0.115;AN=52;BaseQRankSum=-0.572;DP=720;FS=0.000;HRun=0;HaplotypeScore=168.5399;InbreedingCoeff=0.8267;MQ=70.88;MQ0=9;MQRankSum=2.826;QD=4.73;ReadPosRankSum=-0.665;VQSLOD=2.3148;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:42.14:0,42,1115	0/0:9,0:9:9.03:0,9,247	./.	0/0:58,0:23:0:0,0,0	0/0:20,0:20:24.08:0,24,615	0/0:23,0:23:48.16:0,48,798	0/0:23,0:20:26.10:0,26,373	./.	0/0:27,0:27:36.10:0,36,505	0/0:23,0:23:27.09:0,27,712	0/0:13,0:13:18.06:0,18,492	0/0:28,0:27:15.05:0,15,386	0/0:26,0:26:33.10:0,33,806	0/0:16,0:16:9.03:0,9,247	0/0:37,0:37:51.17:0,51,819	0/0:28,0:28:27.07:0,27,384	0/0:29,0:29:36.12:0,36,889	0/0:21,0:21:21.07:0,21,566	0/0:20,0:20:27.08:0,27,481	0/0:25,0:25:30.09:0,30,447	0/0:15,0:15:15.05:0,15,398	0/0:38,0:38:51.13:0,51,694	0/0:21,0:21:24.08:0,24,658	0/0:22,0:21:28.32:0,28,663	0/0:33,0:32:55.42:0,55,835	1/1:17,6:23:12:149,12,0	1/1:25,5:28:9.03:157,9,0	1/1:3,5:8:6.02:104,6,0
chr10	5873131	.	T	TACACAC	3723.60	PASS	AB=0.835;AC=34;AF=0.607;AN=56;BaseQRankSum=-2.525;DP=673;FS=1.096;HRun=0;HaplotypeScore=163.0758;InbreedingCoeff=0.4117;MQ=52.59;MQ0=17;MQRankSum=-3.710;QD=8.26;ReadPosRankSum=-1.117;VQSLOD=2.5385;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:35:45.14:0,45,829	1/1:6,2:9:1.70:36,2,0	1/1:22,0:2:2.04:6,2,0	0/0:30,0:4:3.01:0,3,31	0/1:10,0:19:99:100,0,109	0/0:19,0:21:39.13:0,39,738	0/0:35,0:41:74.58:0,75,1327	1/1:35,0:35:12:178,12,0	0/0:22,0:22:33.09:0,33,581	1/1:12,0:18:21.49:227,21,0	1/1:7,0:16:0.66:79,1,0	1/1:20,1:32:11.94:153,12,0	1/1:8,0:16:7.29:112,7,0	1/1:17,0:30:14.11:190,14,0	0/1:18,0:20:8.41:8,0,466	0/1:18,0:23:31.35:31,0,558	1/1:18,1:21:11.22:323,11,0	1/1:12,3:15:6.02:140,6,0	0/1:16,0:15:15.25:15,0,100	0/0:21,0:23:21.96:0,22,417	0/1:28,0:49:23.90:330,0,24	0/0:20,0:24:16.15:0,16,639	0/1:9,0:17:49.70:104,0,50	1/1:14,0:32:23.25:317,23,0	0/0:23,0:25:39.99:0,40,696	1/1:21,6:30:31.31:652,31,0	1/1:7,9:20:24:559,24,0	1/1:1,0:5:12.04:165,12,0
chr10	5874361	.	A	AG	995.10	PASS	AB=0.770;AC=8;AF=0.154;AN=52;BaseQRankSum=7.946;DP=672;FS=5.490;HRun=0;HaplotypeScore=102.5536;InbreedingCoeff=0.2546;MQ=88.75;MQ0=21;MQRankSum=-1.754;QD=11.99;ReadPosRankSum=-1.120;VQSLOD=4.1133;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:34:84.22:0,84,1117	0/0:8,0:8:21.07:0,21,294	0/1:36,3:34:99:144,0,603	0/0:42,4:40:1.68:0,2,637	0/0:24,0:22:48.01:0,48,561	0/0:2,0:2:2.98:0,3,21	0/1:8,1:4:35.69:36,0,114	0/0:38,0:32:92.94:0,93,1201	1/1:2,8:9:21.07:333,21,0	0/0:35,0:35:84.31:0,84,1252	0/0:18,0:16:45.04:0,45,602	0/0:38,0:38:90.18:0,90,1178	0/0:43,0:43:99:0,111,1435	0/0:37,0:37:99:0,99,1304	0/1:6,7:11:34.82:307,0,35	0/1:3,6:9:59.70:262,0,60	0/0:29,0:28:84.27:0,84,1159	0/0:18,0:18:45.12:0,45,604	0/0:4,0:2:3.01:0,3,42	./.	0/0:61,0:61:99:0,147,2284	1/1:1,2:3:3.01:48,3,0	0/0:15,0:13:30.07:0,30,398	0/0:55,0:54:99:0,144,1937	./.	0/0:29,0:28:72.24:0,72,1007	0/0:38,0:33:93.23:0,93,1243	0/0:13,0:10:21.07:0,21,293
chr10	5874423	.	A	AG	1414.33	PASS	AB=0.804;AC=9;AF=0.161;AN=56;BaseQRankSum=10.298;DP=827;FS=0.000;HRun=0;HaplotypeScore=125.6481;InbreedingCoeff=-0.1798;MQ=58.43;MQ0=42;MQRankSum=-8.295;QD=7.22;ReadPosRankSum=3.408;VQSLOD=3.6063;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:51:99:0,132,1778	0/0:10,0:9:24.01:0,24,313	0/0:23,0:16:25.06:0,25,529	0/0:28,0:17:48.02:0,48,561	0/0:17,0:17:35.94:0,36,411	0/1:12,1:9:29.68:30,0,192	0/1:37,12:33:99:133,0,399	0/0:46,0:35:99:0,102,1361	0/1:10,8:17:99:344,0,120	0/0:45,0:38:99:0,99,1351	0/0:14,0:14:36.02:0,36,482	0/0:44,0:44:99:0,120,1651	0/0:39,0:39:99:0,111,1399	0/0:39,0:39:99:0,102,1323	0/1:13,11:21:99:406,0,135	0/1:7,8:14:11.81:336,0,12	0/0:29,0:26:75.25:0,75,1048	0/0:20,0:20:45.15:0,45,629	0/1:17,4:13:99:158,0,260	0/1:10,2:11:54.81:55,0,172	0/0:63,0:61:99:0,162,2251	0/1:13,3:15:71.59:72,0,121	0/0:17,0:15:35.59:0,36,452	0/0:47,0:47:99:0,117,1549	0/1:26,2:27:22.25:22,0,516	0/0:58,0:51:99:0,141,1947	0/0:36,0:33:89.97:0,90,1170	0/0:3,0:3:9.03:0,9,126
chr10	5875049	.	TGAA	T	12467.71	PASS	AB=1.000;AC=51;AF=0.944;AN=54;BaseQRankSum=-3.287;DP=558;FS=5.796;HRun=0;HaplotypeScore=85.9174;InbreedingCoeff=0.3940;MQ=54.43;MQ0=23;MQRankSum=-0.881;QD=23.39;ReadPosRankSum=2.545;VQSLOD=4.4845;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,21:25:39.13:627,39,0	1/1:4,2:6:6.02:94,6,0	0/1:11,0:6:8.09:8,0,44	0/0:14,2:8:2.87:0,3,27	1/1:3,20:23:27.09:433,27,0	1/1:1,7:7:9.03:145,9,0	1/1:10,4:10:6.02:96,6,0	./.	1/1:9,4:9:9.03:145,9,0	1/1:2,34:36:96.31:1499,96,0	1/1:1,12:13:15.05:241,15,0	1/1:0,34:32:63.21:1011,63,0	1/1:2,31:33:33.04:531,33,0	1/1:1,18:18:39.13:626,39,0	1/1:8,13:20:27.53:435,28,0	1/1:9,5:12:15.05:241,15,0	1/1:6,23:27:39.13:626,39,0	1/1:3,19:23:15.05:241,15,0	1/1:7,15:18:33.98:507,34,0	1/1:9,9:14:27.09:434,27,0	1/1:4,44:44:68.96:1108,69,0	1/1:12,9:17:21.07:337,21,0	1/1:2,13:15:15:241,15,0	1/1:4,27:31:60.20:964,60,0	1/1:4,9:12:12.04:193,12,0	1/1:0,27:26:75.18:1106,75,0	1/1:0,10:10:21.07:337,21,0	1/1:0,6:6:15.05:241,15,0
chr10	5875529	.	T	TA	622.10	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-3.856;DP=726;FS=12.232;HRun=6;HaplotypeScore=66.5088;InbreedingCoeff=0.9975;MQ=81.71;MQ0=0;MQRankSum=-0.881;QD=31.11;ReadPosRankSum=1.103;VQSLOD=3.3993;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,20:20:57.18:717,57,0	0/0:12,0:12:33.07:0,33,337	0/0:24,0:24:63.10:0,63,626	0/0:14,0:14:27.06:0,27,275	0/0:35,0:35:90.20:0,90,918	0/0:17,0:17:48.11:0,48,490	0/0:20,0:20:57.13:0,57,582	0/0:38,0:38:96.19:0,96,974	0/0:21,0:21:63.14:0,63,643	0/0:33,0:33:84.18:0,84,857	0/0:31,0:31:87.16:0,87,869	0/0:20,0:20:57.11:0,57,574	0/0:37,0:37:96.21:0,96,979	0/0:29,0:29:75.15:0,75,759	0/0:31,0:31:90.20:0,90,918	0/0:33,0:33:90.16:0,90,898	0/0:18,0:18:54.12:0,54,551	0/0:19,0:19:57.13:0,57,581	0/0:17,0:17:36.07:0,36,367	0/0:35,0:35:90.20:0,90,918	0/0:16,0:16:45.10:0,45,459	0/0:38,0:38:99:0,105,1064	0/0:32,0:32:93.18:0,93,940	0/0:16,0:16:45.10:0,45,459	0/0:32,0:32:90.20:0,90,918	0/0:37,0:37:99:0,99,1004	0/0:42,0:42:99:0,114,1154	0/0:9,0:9:27.06:0,27,275
chr10	5875970	.	G	GA	5386.11	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-13.918;DP=563;FS=3.033;HRun=8;HaplotypeScore=54.1157;InbreedingCoeff=0.9916;MQ=82.37;MQ0=0;MQRankSum=1.479;QD=29.11;ReadPosRankSum=1.265;VQSLOD=5.2717;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:72.03:0,72,659	0/0:6,0:6:14.98:0,15,132	0/0:19,0:20:31.93:0,32,268	0/0:17,0:16:21.43:0,21,174	0/0:32,0:32:90.03:0,90,819	1/1:3,23:26:63.19:727,63,0	1/1:2,16:19:44.97:499,45,0	0/0:29,0:29:74.55:0,75,685	1/1:1,10:11:30.09:346,30,0	0/0:23,0:23:66.03:0,66,604	0/0:30,0:30:87.03:0,87,792	0/0:15,0:15:45.02:0,45,412	0/0:21,0:21:48.02:0,48,439	0/0:26,0:26:66.03:0,66,604	1/1:2,20:22:35.72:665,36,0	1/1:0,18:18:51.15:589,51,0	0/0:15,0:15:36.02:0,36,329	0/0:13,0:13:13.14:0,13,255	1/1:5,21:26:66.16:740,66,0	1/1:3,19:22:57.13:643,57,0	0/0:6,0:6:18.01:0,18,165	1/1:3,15:18:42.12:485,42,0	0/0:27,0:27:69.03:0,69,631	0/0:17,0:17:51.03:0,51,467	1/1:1,22:23:60.18:693,60,0	0/0:17,0:17:45.02:0,45,412	0/0:24,0:24:57.02:0,57,521	0/0:12,0:12:32.82:0,33,281
chr10	5876429	.	GGAGAGAGAGAGA	G	292.21	PASS	AC=8;AF=0.211;AN=38;BaseQRankSum=3.813;DP=281;FS=2.085;HRun=0;HaplotypeScore=91.2659;InbreedingCoeff=0.5030;MQ=43.80;MQ0=21;MQRankSum=-3.270;QD=7.31;ReadPosRankSum=1.414;VQSLOD=1.1293;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:40:39.13:0,39,1172	0/0:5,0:5:12.04:0,12,375	./.	./.	0/0:10,0:8:3.01:0,3,105	1/1:11,0:11:2.38:76,2,0	./.	0/0:17,0:17:19.31:0,19,364	1/1:9,0:8:8.03:110,8,0	0/0:11,0:11:9.03:0,9,179	./.	0/0:11,0:9:6.02:0,6,93	0/0:9,0:6:6.02:0,6,118	0/0:8,0:8:6:0,6,70	./.	./.	1/1:11,4:14:2.40:134,2,0	0/0:4,0:3:6.02:0,6,122	./.	1/1:5,0:5:3.01:83,3,0	./.	./.	0/0:14,0:12:0:0,0,0	0/0:12,0:10:6.02:0,6,98	0/0:7,0:6:2.22:0,2,7	0/0:6,0:6:15.05:0,15,519	0/0:10,0:10:18.53:0,19,380	0/0:6,0:5:4.57:0,5,98
chr10	5876473	.	ATC	A	1156.76	PASS	AB=0.961;AC=19;AF=0.352;AN=54;BaseQRankSum=4.358;DP=364;FS=27.627;HRun=0;HaplotypeScore=59.0919;InbreedingCoeff=0.5901;MQ=73.75;MQ0=35;MQRankSum=-4.213;QD=11.45;ReadPosRankSum=-0.446;VQSLOD=1.2929;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:23,1:24:27.46:27,0,603	0/1:5,0:5:70.23:70,0,71	0/0:61,0:18:31.71:0,32,274	0/0:88,0:25:33.19:0,33,382	0/0:12,0:12:33.11:0,33,496	1/1:3,10:13:15.03:166,15,0	1/1:0,7:7:6.02:71,6,0	0/0:16,0:16:21.68:0,22,585	1/1:3,2:5:12.03:144,12,0	0/0:4,0:4:12.01:0,12,148	0/0:3,0:3:9.03:0,9,145	0/0:8,0:8:15.03:0,15,182	0/0:5,0:5:8.70:0,9,110	0/0:4,0:4:12.04:0,12,180	1/1:0,10:10:12.03:138,12,0	1/1:0,1:1:3.01:36,3,0	0/0:11,0:10:20.60:0,21,256	0/0:3,0:3:9.03:0,9,106	1/1:1,9:10:27.95:362,28,0	1/1:2,4:5:2.62:27,3,0	0/0:11,0:10:21.06:0,21,290	./.	0/0:6,0:6:6.90:0,7,80	0/0:13,0:11:9.93:0,10,149	1/1:7,1:8:18.06:269,18,0	0/0:11,0:11:7.50:0,7,421	0/0:7,0:6:11.72:0,12,185	0/1:11,1:11:32.83:33,0,299
chr10	5876907	.	CCTT	C	370.55	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.752;DP=630;FS=0.000;HRun=0;HaplotypeScore=87.6320;InbreedingCoeff=0.9980;MQ=78.45;MQ0=0;MQRankSum=-1.499;QD=19.50;ReadPosRankSum=1.333;VQSLOD=3.4508;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:87.24:0,87,1768	0/0:10,0:10:26.48:0,26,553	0/0:25,0:24:59.57:0,60,802	0/0:16,0:15:38.88:0,39,536	0/0:30,0:30:87.30:0,87,1859	0/0:27,0:27:81.28:0,81,1762	0/0:13,0:13:39.12:0,39,819	0/0:38,0:38:99:0,105,1957	0/0:22,0:22:63.18:0,63,1300	0/0:18,0:18:54.18:0,54,1128	0/0:21,0:21:60.19:0,60,1280	0/0:22,0:22:63.20:0,63,1344	0/0:27,0:27:78.25:0,78,1651	0/0:24,0:24:72.23:0,72,1517	0/0:31,0:31:84.27:0,84,1811	0/0:24,0:24:72.25:0,72,1555	1/1:1,18:19:30.02:465,30,0	0/0:20,0:20:57.14:0,57,1145	0/0:18,0:18:54.18:0,54,1134	0/0:27,0:27:78.24:0,78,1593	0/0:17,0:17:51.14:0,51,1019	0/0:20,0:20:60.18:0,60,1218	0/0:16,0:16:45.14:0,45,949	0/0:12,0:12:36.12:0,36,793	0/0:23,0:23:66.23:0,66,1426	0/0:24,0:24:72.22:0,72,1435	0/0:43,0:43:99:0,123,2620	0/0:14,0:14:42.14:0,42,925
chr10	5878365	.	CAAT	C	6360.83	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=13.218;DP=447;FS=1.771;HRun=0;HaplotypeScore=65.1766;InbreedingCoeff=0.9620;MQ=69.03;MQ0=0;MQRankSum=-0.945;QD=38.09;ReadPosRankSum=2.937;VQSLOD=5.4702;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,19:21:51.17:789,51,0	0/0:9,0:9:27.09:0,27,580	0/0:4,0:4:9.03:0,9,185	0/0:8,0:8:4.02:0,4,195	0/0:29,0:29:78.25:0,78,1607	1/1:1,26:27:60.20:928,60,0	1/1:0,7:7:18.06:267,18,0	0/0:38,0:38:96.32:0,96,1981	1/1:0,8:8:24.08:371,24,0	0/0:19,0:19:48.16:0,48,1027	0/0:18,0:18:48.16:0,48,1031	0/0:19,0:19:51.16:0,51,1038	0/0:11,0:11:24.08:0,24,481	0/0:7,0:7:21.07:0,21,432	1/1:3,14:17:42.14:648,42,0	1/1:1,14:15:36.12:557,36,0	0/0:17,0:17:45.15:0,45,919	0/0:18,0:18:45.15:0,45,961	1/1:3,21:24:63.15:905,63,0	1/1:1,22:23:57.19:879,57,0	0/0:7,0:7:18.06:0,18,385	1/1:0,6:6:18.06:275,18,0	0/0:10,0:10:24.08:0,24,515	0/0:5,0:5:15.05:0,15,299	1/1:1,18:19:48.16:740,48,0	0/0:23,0:23:63.22:0,63,1318	0/0:15,0:15:33.11:0,33,709	0/0:23,0:23:57.20:0,57,1197
chr10	5879051	.	GA	G	373.04	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.578;DP=467;FS=6.195;HRun=2;HaplotypeScore=41.2466;InbreedingCoeff=0.7350;MQ=63.15;MQ0=1;MQRankSum=-1.660;QD=31.09;ReadPosRankSum=1.489;VQSLOD=2.8047;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:69.23:0,69,1033	0/0:9,0:9:27.09:0,27,405	0/0:2,0:2:3.01:0,3,45	0/0:2,0:2:3.01:0,3,45	0/0:28,0:28:84.28:0,84,1249	0/0:28,0:28:78.25:0,78,1145	0/0:14,0:14:42.14:0,42,624	0/0:20,0:20:42.13:0,42,610	0/0:16,0:16:48.13:0,48,677	0/0:18,0:18:51.16:0,51,744	0/0:35,0:35:99:0,105,1553	0/0:17,0:17:51.17:0,51,763	0/0:16,0:16:48.16:0,48,718	0/0:16,0:16:48.16:0,48,718	0/0:17,0:17:51.17:0,51,763	0/0:17,0:17:51.17:0,51,764	1/1:0,12:12:36.12:467,36,0	0/0:10,0:10:30.02:0,30,400	0/0:12,0:12:33.11:0,33,495	0/0:28,0:28:78.24:0,78,1141	0/0:11,0:11:33.11:0,33,495	0/0:9,0:9:27.09:0,27,404	0/0:20,0:20:57.19:0,57,852	0/0:10,0:9:27.07:0,27,365	0/0:17,0:17:51.15:0,51,741	0/0:18,0:18:54.18:0,54,809	0/0:26,0:26:78.26:0,78,1164	0/0:16,0:16:48.16:0,48,700
chr10	5879406	.	A	AT	8722.31	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-14.994;DP=720;FS=7.968;HRun=4;HaplotypeScore=67.7604;InbreedingCoeff=0.9987;MQ=88.23;MQ0=0;MQRankSum=-4.641;QD=35.89;ReadPosRankSum=2.170;VQSLOD=5.2030;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:48.14:0,48,544	0/0:15,0:15:45.13:0,45,510	0/0:28,0:28:72.18:0,72,794	0/0:24,0:24:52.06:0,52,594	0/0:30,0:30:87.25:0,87,986	1/1:1,28:29:78.20:1045,78,0	1/1:1,13:14:36.12:492,36,0	0/0:32,0:32:78.21:0,78,877	1/1:1,24:25:69.23:944,69,0	0/0:26,0:26:72.12:0,72,799	0/0:38,0:38:99:0,111,1258	0/0:25,0:25:75.21:0,75,850	0/0:27,0:27:78.21:0,78,874	0/0:31,0:31:90.24:0,90,1010	1/1:1,33:34:93.31:1272,93,0	1/1:2,25:27:66.22:903,66,0	0/0:30,0:30:84.20:0,84,929	0/0:6,0:6:18.05:0,18,204	1/1:2,29:31:87.25:1141,87,0	1/1:2,30:32:87.25:1168,87,0	0/0:30,0:30:87.24:0,87,978	1/1:1,23:24:66.22:898,66,0	0/0:20,0:20:59.83:0,60,649	0/0:20,0:20:51.11:0,51,558	1/1:1,26:27:66.13:859,66,0	0/0:24,0:24:63.16:0,63,704	0/0:39,0:39:99:0,108,1225	0/0:16,0:16:48.14:0,48,543
chr10	5879686	.	C	CACTCG	18952.93	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=14.677;DP=781;FS=0.619;HRun=0;HaplotypeScore=154.0457;InbreedingCoeff=0.9998;MQ=78.70;MQ0=0;MQRankSum=-19.970;QD=61.14;ReadPosRankSum=-0.090;VQSLOD=5.0407;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,19:25:48.16:1400,48,0	0/0:10,0:10:30.10:0,30,622	0/0:30,0:30:81.18:0,81,1517	0/0:20,0:21:45.15:0,45,860	0/0:29,0:29:84.22:0,84,1589	1/1:9,21:30:66.23:1987,66,0	1/1:5,14:19:45.15:1298,45,0	0/0:43,0:43:99:0,120,2328	1/1:3,22:25:66.23:1983,66,0	0/0:34,0:34:99:0,99,2035	0/0:27,0:27:75.26:0,75,1542	0/0:19,0:19:54.19:0,54,1119	0/0:28,0:28:84.22:0,84,1588	0/0:24,0:24:63.22:0,63,1293	1/1:4,25:31:69.24:2076,69,0	1/1:7,27:39:93.32:2773,93,0	1/1:5,13:20:30.10:853,30,0	0/0:15,0:15:42.04:0,42,713	1/1:7,7:15:42.13:1151,42,0	1/1:17,21:38:60.21:1813,60,0	0/0:44,0:44:99:0,129,2624	1/1:8,16:24:42.14:1227,42,0	0/0:24,0:24:69.18:0,69,1349	0/0:44,0:44:99:0,111,2300	1/1:12,30:44:81.28:2391,81,0	0/0:31,0:31:93.30:0,93,1823	0/0:28,0:28:78.25:0,78,1576	0/0:20,0:20:57.17:0,57,1142
chr10	5880296	.	GA	G	1034.97	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.797;DP=745;FS=7.264;HRun=3;HaplotypeScore=97.9871;InbreedingCoeff=0.8924;MQ=83.98;MQ0=0;MQRankSum=-3.443;QD=33.39;ReadPosRankSum=1.138;VQSLOD=3.6032;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,147,2151	0/0:5,0:5:15.05:0,15,223	0/0:23,0:23:69.15:0,69,908	0/0:22,0:22:62.91:0,63,806	0/0:23,0:23:60.18:0,60,871	0/0:21,0:21:60.20:0,60,899	0/0:34,0:34:99:0,102,1505	0/0:30,0:30:90.27:0,90,1290	0/0:28,0:28:81.25:0,81,1174	0/0:22,0:22:60.16:0,60,825	0/0:14,0:14:42.14:0,42,611	0/0:36,0:36:99:0,108,1607	0/0:35,0:35:99:0,99,1474	0/0:25,0:25:72.22:0,72,1038	0/0:45,0:44:99:0,132,1937	0/0:23,0:23:69.21:0,69,1012	1/1:0,31:31:87.28:1130,87,0	0/0:47,0:47:99:0,132,1901	0/0:29,0:29:87.29:0,87,1298	0/0:23,0:23:69.23:0,69,1033	0/0:23,0:23:69.23:0,69,1031	0/0:22,0:22:66.21:0,66,969	0/0:19,0:19:51.14:0,51,707	0/0:35,0:35:99:0,105,1569	0/0:18,0:18:54.17:0,54,773	0/0:32,0:32:90.30:0,90,1326	0/0:28,0:27:84.28:0,84,1254	0/0:2,0:2:6.02:0,6,90
chr10	5881961	.	CT	C	965.48	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=19.397;DP=679;FS=4.737;HRun=3;HaplotypeScore=163.2841;InbreedingCoeff=0.9918;MQ=65.02;MQ0=0;MQRankSum=-18.090;QD=3.70;ReadPosRankSum=0.201;VQSLOD=0.1533;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:42,2:44:43.76:121,44,0	0/0:10,0:10:30.10:0,30,432	0/0:8,0:7:11.67:0,12,177	0/0:14,0:14:28.45:0,28,304	0/0:24,0:24:66.22:0,66,949	1/1:14,0:14:23.23:66,23,0	1/1:19,0:19:29.20:95,29,0	0/0:33,0:33:87.28:0,87,1235	1/1:22,1:23:36.82:151,37,0	0/0:37,0:37:99:0,111,1569	0/0:23,0:23:66.21:0,66,933	0/0:30,0:30:90.30:0,90,1296	0/0:30,0:30:90.30:0,90,1286	0/0:28,0:28:81.25:0,81,1130	1/1:30,0:30:40.99:111,41,0	1/1:39,2:41:63.75:231,64,0	1/1:15,1:16:17.84:53,18,0	0/0:11,0:11:30.10:0,30,424	1/1:14,0:14:18.98:79,19,0	1/1:22,0:21:24.51:70,25,0	0/0:49,0:49:99:0,144,2040	1/1:19,0:19:26.69:98,27,0	0/0:26,0:26:75.20:0,75,1038	0/0:28,0:28:81.27:0,81,1166	1/1:19,0:19:32.96:118,33,0	0/0:22,0:22:66.22:0,66,951	0/0:35,0:35:99:0,102,1467	0/0:9,0:9:27.09:0,27,389
chr10	5881963	.	T	TG	5577.93	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=19.299;DP=636;FS=6.542;HRun=0;HaplotypeScore=142.9070;InbreedingCoeff=0.9291;MQ=65.04;MQ0=0;MQRankSum=-17.942;QD=23.54;ReadPosRankSum=0.213;VQSLOD=5.1527;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,28:34:75.07:693,75,0	0/0:10,0:10:30.10:0,30,419	0/1:9,0:7:12.88:13,0,177	0/0:12,0:12:28.28:0,28,257	0/0:23,0:23:66.22:0,66,922	1/1:0,13:13:39.04:363,39,0	1/1:3,14:17:45.51:411,46,0	0/0:30,0:30:87.28:0,87,1200	1/1:3,15:18:53.55:452,54,0	0/0:37,0:37:99:0,111,1526	0/0:22,0:22:66.21:0,66,907	0/0:31,0:31:90.30:0,90,1258	0/0:30,0:30:90.30:0,90,1243	0/0:27,0:27:81.25:0,81,1098	1/1:3,24:27:72.02:659,72,0	1/1:3,31:34:99:941,102,0	1/1:1,14:15:41.07:363,41,0	0/0:10,0:10:30.10:0,30,419	1/1:5,7:12:23.94:258,24,0	1/1:2,20:21:56.81:500,57,0	0/0:49,0:49:99:0,147,2017	1/1:5,13:18:45.04:441,45,0	0/0:26,0:26:75.16:0,75,1008	0/0:27,0:27:81.27:0,81,1133	1/1:3,15:18:51.04:484,51,0	0/0:22,0:22:66.22:0,66,923	0/0:34,0:34:99:0,102,1421	0/0:9,0:9:27.09:0,27,377
chr10	5881964	.	T	TCTGCA	18266.55	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=18.586;DP=675;FS=2.931;HRun=0;HaplotypeScore=162.5415;InbreedingCoeff=0.9418;MQ=63.42;MQ0=0;MQRankSum=-18.615;QD=64.77;ReadPosRankSum=-1.143;VQSLOD=5.1274;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,28:41:99:2665,99,0	0/0:10,0:10:30.10:0,30,699	0/0:10,0:8:9.65:0,10,343	0/1:11,0:11:3.37:3,0,310	0/0:23,0:23:69.22:0,69,1542	1/1:0,13:13:39.13:1038,39,0	1/1:9,14:23:60.19:1559,60,0	0/0:30,0:30:90.29:0,90,1982	1/1:8,15:23:63.16:1550,63,0	0/0:36,0:36:99:0,108,2516	0/0:21,0:21:63.22:0,63,1467	0/0:32,0:32:93.31:0,93,2122	0/0:30,0:30:90.30:0,90,2051	0/0:25,0:25:75.24:0,75,1702	1/1:8,24:32:84.27:2156,84,0	1/1:4,31:35:99:2574,102,0	1/1:9,14:23:60.21:1584,60,0	0/0:10,0:10:30.10:0,30,682	1/1:11,7:18:51.15:1211,51,0	1/1:4,19:23:57.19:1468,57,0	0/0:49,0:49:99:0,148,3372	1/1:6,13:19:42.14:1124,42,0	0/0:25,0:25:75.26:0,75,1743	0/0:27,0:27:81.28:0,81,1865	1/1:4,15:19:54.11:1334,54,0	0/0:22,0:22:66.23:0,66,1538	0/0:34,0:34:99:0,102,2369	0/0:9,0:9:27.09:0,27,617
chr10	5882206	.	C	CTGTGTGTGTGTG	4215.62	PASS	AB=0.987;AC=16;AF=0.286;AN=56;BaseQRankSum=-6.028;DP=888;FS=1.528;HRun=0;HaplotypeScore=323.4317;InbreedingCoeff=0.4819;MQ=66.79;MQ0=13;MQRankSum=-6.014;QD=11.12;ReadPosRankSum=-6.559;VQSLOD=1.6418;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:40,0:51:12.95:147,13,0	0/0:10,0:10:11.86:0,12,332	0/1:42,0:21:0.10:0,0,96	0/1:58,0:31:9.06:9,0,285	0/0:22,0:23:32.34:0,32,713	0/0:23,0:23:44.33:0,44,727	0/0:25,0:25:20.52:0,21,214	1/1:37,0:37:35.20:984,35,0	0/0:27,0:27:13.76:0,14,507	0/0:53,0:53:81.45:0,81,1638	0/0:24,0:24:41.12:0,41,847	0/0:31,0:31:57.20:0,57,1412	0/0:30,0:30:57.16:0,57,1355	0/0:33,0:33:45.61:0,46,1157	0/0:36,0:35:3.09:0,3,643	0/0:25,0:25:46.57:0,47,708	0/1:33,0:36:51.68:64,0,52	0/1:16,0:16:9.32:9,0,579	0/1:19,0:18:11.63:12,0,122	0/0:28,0:28:17.91:0,18,632	0/0:57,0:58:68.94:0,69,1650	0/0:25,0:25:22.16:0,22,196	0/0:21,0:21:33.08:0,33,783	0/0:35,0:35:55.10:0,55,1777	0/1:34,0:34:5.92:6,0,414	1/1:12,17:37:75.20:1865,75,0	1/1:14,16:34:20.19:891,20,0	1/1:7,5:12:6.02:229,6,0
chr10	5882226	.	GTGTC	G	8208.09	PASS	AB=0.821;AC=40;AF=0.714;AN=56;BaseQRankSum=-3.204;DP=853;FS=13.520;HRun=0;HaplotypeScore=184.8650;InbreedingCoeff=0.7018;MQ=57.81;MQ0=12;MQRankSum=4.367;QD=13.87;ReadPosRankSum=5.738;VQSLOD=3.4814;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:52:32.99:0,33,378	1/1:2,7:9:8.92:143,9,0	0/1:38,0:15:9.35:9,0,34	0/0:50,0:23:1.31:0,1,59	1/1:11,11:22:5.82:96,6,0	1/1:26,0:26:48.07:622,48,0	1/1:26,0:26:5.57:76,6,0	0/0:48,0:46:43.26:0,43,397	1/1:26,0:26:21.07:335,21,0	1/1:19,28:48:86.70:976,87,0	1/1:13,11:24:18.53:284,19,0	1/1:10,19:29:33.11:527,33,0	1/1:11,18:28:33.06:526,33,0	1/1:7,22:29:30.10:479,30,0	1/1:29,0:28:41.40:535,41,0	1/1:27,0:27:60.01:769,60,0	0/0:5,0:36:12.10:0,12,137	0/1:8,10:18:20.78:221,0,21	1/1:16,0:15:9.46:87,9,0	1/1:26,0:26:26.68:430,27,0	1/1:25,31:55:27.06:430,27,0	1/1:23,0:23:6.02:91,6,0	1/1:18,6:24:36.75:413,37,0	1/1:13,25:38:47.43:737,47,0	1/1:29,0:29:30.07:420,30,0	0/0:37,0:37:54.85:0,55,690	0/0:27,0:27:27.04:0,27,362	0/0:8,0:8:6:0,6,80
chr10	5882228	.	GTC	G	2992.77	PASS	AB=0.884;AC=23;AF=0.411;AN=56;BaseQRankSum=8.780;DP=834;FS=30.612;HRun=0;HaplotypeScore=175.7132;InbreedingCoeff=-0.6829;MQ=57.98;MQ0=12;MQRankSum=2.365;QD=4.51;ReadPosRankSum=9.249;VQSLOD=0.9413;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:52:38.55:0,39,327	0/1:9,0:9:23.84:27,0,24	0/1:35,0:15:6.85:7,0,184	0/0:51,0:25:30.35:0,30,443	0/1:22,0:22:3.90:4,0,238	0/1:14,10:25:60.70:335,0,61	0/1:8,3:26:21.03:21,0,88	0/1:49,1:48:99:108,0,479	0/1:8,6:26:55.34:136,0,55	0/1:48,0:48:99:414,0,343	0/1:21,1:22:43.49:43,0,240	0/1:29,0:29:85.24:85,0,224	0/1:29,0:28:84.99:85,0,214	0/1:28,0:28:84.66:85,0,132	0/1:16,11:26:99:325,0,106	0/1:18,9:27:26.40:407,0,26	0/1:34,0:34:52.10:71,0,52	0/1:18,0:18:34.75:35,0,143	0/1:16,0:15:45.84:68,0,46	0/1:12,7:26:54.10:187,0,54	0/1:54,0:53:47.29:47,0,414	0/1:11,4:23:26.02:26,0,90	0/1:24,0:24:99:189,0,109	0/1:36,1:37:99:213,0,160	0/1:20,7:28:99:231,0,164	0/0:34,0:34:24.98:0,25,496	0/0:27,0:27:9.84:0,10,179	0/0:4,0:4:8.98:0,9,77
chr10	5882232	.	GTC	G	1586.26	PASS	AB=0.892;AC=16;AF=0.286;AN=56;BaseQRankSum=10.907;DP=798;FS=1.990;HRun=0;HaplotypeScore=177.7271;InbreedingCoeff=-0.3984;MQ=58.28;MQ0=10;MQRankSum=1.848;QD=3.88;ReadPosRankSum=13.684;VQSLOD=0.4132;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:49:41.88:0,42,725	0/1:9,0:9:6.57:7,0,35	0/0:35,0:15:38.28:0,38,389	0/0:48,0:25:41.99:0,42,630	0/0:22,0:22:20.62:0,21,330	0/1:15,10:25:78.86:327,0,79	0/1:23,3:26:13.11:13,0,103	0/1:49,0:47:29.56:30,0,1222	0/1:20,6:26:67.80:136,0,68	0/0:43,0:43:38.51:0,39,725	0/0:21,0:21:5.27:0,5,274	0/1:30,0:30:9.01:9,0,296	0/1:27,0:26:9.69:10,0,235	0/1:28,0:28:19.13:19,0,122	0/1:15,10:24:94.50:306,0,94	0/1:16,9:25:38.72:414,0,39	0/0:33,0:33:6.08:0,6,201	0/1:16,0:16:6.46:6,0,104	0/1:16,0:15:31.32:31,0,196	0/1:16,7:23:66.73:187,0,67	0/0:54,0:53:14.35:0,14,515	0/1:19,4:23:25.76:26,0,103	0/0:23,0:23:19.34:0,19,247	0/1:35,0:35:22.24:22,0,216	0/1:19,7:26:99:197,0,206	0/0:29,0:29:37.54:0,38,1001	0/0:25,0:25:24.45:0,24,378	0/0:4,0:4:9:0,9,125
chr10	5883916	.	GGATA	G	17759.66	PASS	AB=0.561;AC=50;AF=0.893;AN=56;BaseQRankSum=0.083;DP=727;FS=0.747;HRun=0;HaplotypeScore=124.0467;InbreedingCoeff=0.6328;MQ=70.51;MQ0=4;MQRankSum=0.769;QD=26.71;ReadPosRankSum=6.324;VQSLOD=4.6843;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,23:33:35.99:618,36,0	1/1:0,9:9:21.07:360,21,0	0/0:36,0:26:50.10:0,50,767	0/0:26,0:16:20.44:0,20,364	1/1:2,30:32:65.92:956,66,0	1/1:4,24:28:48.16:824,48,0	1/1:3,11:14:23.87:371,24,0	1/1:11,21:32:60:695,60,0	1/1:4,26:30:51.17:874,51,0	1/1:6,22:28:68.96:896,69,0	1/1:5,17:22:26.98:427,27,0	1/1:5,31:36:54.18:923,54,0	1/1:1,23:24:39.13:669,39,0	1/1:7,18:24:41.97:721,42,0	1/1:2,30:32:60.21:1030,60,0	1/1:5,28:33:57.20:978,57,0	1/1:0,23:23:39.13:669,39,0	0/1:5,14:19:31.41:451,0,31	1/1:4,15:19:45.05:534,45,0	1/1:5,31:36:74.71:1019,75,0	1/1:6,10:16:15.05:257,15,0	1/1:2,25:27:39.13:669,39,0	1/1:1,24:25:36.12:618,36,0	1/1:7,15:22:24.08:412,24,0	1/1:10,26:36:54.18:927,54,0	1/1:3,19:22:57.09:862,57,0	1/1:7,23:29:36.12:617,36,0	0/1:2,10:12:9.05:384,0,9
chr10	5884141	.	TATAG	T	2755.18	PASS	AB=0.786;AC=19;AF=0.352;AN=54;BaseQRankSum=9.929;DP=554;FS=0.000;HRun=0;HaplotypeScore=104.0394;InbreedingCoeff=0.8378;MQ=70.74;MQ0=5;MQRankSum=1.701;QD=14.20;ReadPosRankSum=0.986;VQSLOD=2.8421;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:29.75:0,30,543	0/0:5,0:5:12.04:0,12,259	./.	0/0:16,0:15:0:0,0,0	0/0:25,0:25:24.08:0,24,559	1/1:11,12:23:33.11:508,33,0	1/1:5,3:9:6.02:92,6,0	0/0:32,0:31:3.01:0,3,39	1/1:11,5:16:3.01:46,3,0	0/0:28,0:28:30.10:0,30,657	0/0:21,0:21:27.08:0,27,566	0/0:18,0:18:27.09:0,27,582	0/0:19,0:19:24.07:0,24,472	0/0:24,0:24:51.18:0,51,1168	1/1:9,6:15:15.05:231,15,0	1/1:7,19:26:42.14:647,42,0	0/1:15,0:21:2.66:23,0,3	0/0:22,0:23:36.11:0,36,694	1/1:8,5:13:15.05:231,15,0	1/1:14,13:27:33.04:480,33,0	0/0:15,0:15:18.06:0,18,390	1/1:8,11:17:18.06:277,18,0	0/0:19,0:19:24.08:0,24,540	0/0:16,0:17:23.81:0,24,531	1/1:11,13:24:27.09:416,27,0	0/0:23,0:23:30.10:0,30,657	0/0:25,0:25:51.17:0,51,1089	0/0:13,0:13:18.06:0,18,330
chr10	5885346	.	GGT	G	885.68	PASS	AB=0.957;AC=15;AF=0.268;AN=56;BaseQRankSum=0.212;DP=758;FS=1.475;HRun=0;HaplotypeScore=132.6510;InbreedingCoeff=0.2740;MQ=59.10;MQ0=17;MQRankSum=2.145;QD=3.17;ReadPosRankSum=0.403;VQSLOD=2.4329;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:34:5.47:0,5,21	0/0:10,0:11:0.79:0,1,20	0/0:26,0:18:0:0,0,0	0/0:26,0:21:8.88:0,9,58	0/1:14,0:14:0:0,0,0	0/0:17,0:15:5.40:0,5,17	0/0:26,0:22:3.01:0,3,41	1/1:36,0:35:3.47:34,3,0	0/1:36,0:36:11.61:12,0,37	0/0:41,0:43:36.78:0,37,283	0/1:12,0:14:1.17:1,0,106	0/0:33,0:34:0.21:0,0,46	0/0:25,0:25:0.02:0,0,63	1/1:26,0:25:0.60:2,1,0	0/0:36,0:35:10.50:0,11,78	0/0:21,0:20:17.91:0,18,125	1/1:28,3:31:15.50:319,16,0	0/0:17,0:16:6.66:0,7,42	0/1:26,0:25:0.52:1,0,1	0/0:21,0:18:0.57:0,1,2	0/0:68,0:63:26.54:0,27,186	0/1:19,0:19:1.37:1,0,18	0/0:18,0:18:11.83:0,12,145	0/0:30,0:31:8.99:0,9,75	0/0:20,0:19:3.41:0,3,18	0/1:28,5:29:3.59:176,0,4	1/1:23,6:28:31.90:376,32,0	0/1:8,2:9:50.29:95,0,50
chr10	5885383	.	GTA	G	2134.71	PASS	AB=0.990;AC=32;AF=0.593;AN=54;BaseQRankSum=5.232;DP=1175;FS=45.508;HRun=0;HaplotypeScore=162.2334;InbreedingCoeff=-0.3832;MQ=34.16;MQ0=128;MQRankSum=3.720;QD=1.96;ReadPosRankSum=3.324;VQSLOD=1.4603;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:55,0:39:1.83:19,2,0	0/1:18,0:16:6.89:7,0,68	0/1:2,0:1:0:0,0,0	./.	0/0:23,0:19:2.99:0,3,169	1/1:28,0:22:8.70:55,9,0	0/1:62,0:48:8.56:22,0,9	0/0:57,0:38:66.53:0,67,521	1/1:52,1:41:17.27:251,17,0	0/1:62,1:47:99:256,0,358	0/1:28,1:26:23.68:24,0,283	0/1:51,1:46:99:125,0,171	0/1:53,0:43:92.87:93,0,236	0/1:42,1:36:96.35:96,0,180	1/1:54,1:48:1.25:90,1,0	0/1:53,0:42:2.65:79,0,3	0/1:41,0:34:40.62:224,0,41	0/1:29,0:26:70.35:70,0,122	0/1:38,0:29:56.87:57,0,289	1/1:27,1:22:11.97:96,12,0	0/1:121,1:91:63.88:64,0,424	1/1:40,0:36:15.56:129,16,0	0/1:31,0:29:42.07:42,0,210	0/1:39,0:34:19.17:19,0,112	1/1:33,0:29:8.21:56,8,0	0/1:56,3:37:99:126,0,227	0/1:44,2:41:31.02:266,0,31	0/1:18,0:17:19.14:19,0,102
chr10	5885397	.	GTA	G	648.06	PASS	AB=0.991;AC=21;AF=0.404;AN=52;BaseQRankSum=9.230;DP=1284;FS=78.354;HRun=0;HaplotypeScore=183.1394;InbreedingCoeff=-0.1900;MQ=33.13;MQ0=162;MQRankSum=1.486;QD=0.79;ReadPosRankSum=1.157;VQSLOD=-0.1693;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:55,0:37:2.77:22,3,0	0/0:24,0:21:5.49:0,5,282	./.	./.	0/0:27,0:24:36.05:0,36,556	1/1:31,0:23:8.61:51,9,0	0/1:70,0:53:13.26:17,0,13	0/0:71,1:36:77.55:0,78,933	0/1:53,0:40:38.72:77,0,39	0/1:72,0:52:99:106,0,1026	0/0:36,0:33:13.46:0,13,726	0/1:51,1:46:70.15:70,0,573	0/0:54,0:44:8.11:0,8,826	0/1:46,1:41:53.83:54,0,633	0/1:59,1:53:34.83:61,0,35	0/1:59,0:46:15.72:26,0,16	0/1:39,0:31:41.86:42,0,308	0/1:32,0:28:30.25:30,0,426	0/1:42,1:32:18.43:18,0,546	0/1:31,0:23:11.01:38,0,11	0/0:142,1:105:12.26:0,12,1384	1/1:45,0:39:5.61:52,6,0	0/0:39,0:37:17.31:0,17,807	0/0:47,0:41:32.63:0,33,488	1/1:33,0:28:1.25:3,1,0	0/1:57,1:37:56.66:57,0,635	0/1:42,1:37:79.07:79,0,261	0/0:18,0:14:0.03:0,0,164
chr10	5885399	.	ATGTG	A	50.20	PASS	AB=0.977;AC=8;AF=0.154;AN=52;BaseQRankSum=6.319;DP=1294;FS=8.662;HRun=0;HaplotypeScore=204.2813;InbreedingCoeff=0.0821;MQ=33.10;MQ0=170;MQRankSum=-0.414;QD=0.14;ReadPosRankSum=1.240;VQSLOD=2.0048;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:37:0.85:0,1,3	0/0:25,0:22:23.60:0,24,473	./.	./.	0/0:28,0:25:39.07:0,39,834	0/1:32,0:24:5.02:5,0,13	1/1:67,2:51:0.63:21,1,0	0/0:72,0:35:55.04:0,55,669	0/1:53,2:42:65.80:66,0,91	0/0:71,0:51:88.42:0,88,1736	0/0:38,0:34:57.16:0,57,1202	0/0:54,0:49:27.29:0,27,987	0/0:55,0:45:58.38:0,58,1305	0/0:48,0:41:46.43:0,46,1027	0/1:60,1:54:55.18:55,0,97	0/1:55,2:44:7.64:8,0,14	0/0:39,0:31:37.86:0,38,554	0/0:32,0:28:42.76:0,43,773	0/0:46,0:34:57.60:0,58,550	0/1:30,1:23:0.05:0,0,35	0/0:142,0:104:99:0,108,2226	0/1:43,1:38:5.44:5,0,16	0/0:38,0:37:75.13:0,75,1484	0/0:47,0:41:36.06:0,36,721	0/0:35,0:28:2.92:0,3,17	0/0:55,0:36:31.61:0,32,544	0/0:41,0:36:23.92:0,24,414	0/0:18,0:14:9.50:0,10,144
chr10	5885413	.	GTGTA	G	766.60	PASS	AB=0.982;AC=20;AF=0.385;AN=52;BaseQRankSum=9.663;DP=1315;FS=11.238;HRun=0;HaplotypeScore=187.6797;InbreedingCoeff=0.1320;MQ=33.13;MQ0=188;MQRankSum=-3.884;QD=1.14;ReadPosRankSum=-2.508;VQSLOD=1.0082;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:42,10:35:2.78:25,3,0	0/0:30,0:26:12.41:0,12,718	./.	./.	0/0:31,0:29:45.15:0,45,1159	1/1:35,0:24:6.42:51,6,0	1/1:67,0:51:1.13:3,1,0	0/0:61,0:15:4.89:0,5,325	0/1:58,0:40:26.53:105,0,27	0/0:64,0:43:81.96:0,82,2095	0/0:35,0:30:52.08:0,52,1253	0/0:58,0:50:30.29:0,30,1270	0/0:64,0:51:51.77:0,52,1686	0/0:49,0:41:23.28:0,23,1253	0/1:62,2:50:35.66:42,0,36	1/1:61,0:43:1.38:23,1,0	0/1:39,0:30:1.82:2,0,452	0/1:30,1:28:9.82:10,0,850	0/1:47,0:29:81.48:81,0,120	0/1:35,0:23:23.83:24,0,75	0/0:146,0:103:99:0,110,2754	1/1:45,0:36:2.41:23,2,0	0/0:42,0:39:35.76:0,36,1703	0/0:49,1:43:48.16:0,48,966	1/1:36,0:27:2.37:8,2,0	0/1:57,2:37:99:380,0,141	0/1:39,2:35:50.93:141,0,51	0/0:15,0:10:4.23:0,4,26
chr10	5885417	.	ATGTG	A	642.12	PASS	AB=0.871;AC=8;AF=0.154;AN=52;BaseQRankSum=6.509;DP=1318;FS=3.777;HRun=0;HaplotypeScore=193.0475;InbreedingCoeff=0.0982;MQ=33.20;MQ0=192;MQRankSum=-5.175;QD=1.78;ReadPosRankSum=-0.438;VQSLOD=2.7540;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:54,0:39:0.21:0,0,0	0/0:30,0:26:28.89:0,29,731	./.	./.	0/0:34,0:33:51.16:0,51,1202	0/0:23,11:24:2.96:0,3,23	1/1:64,5:53:0.94:2,1,0	0/0:62,0:14:20.82:0,21,295	0/1:46,12:39:26.75:27,0,52	0/0:66,0:43:98.84:0,99,2195	0/0:37,0:32:54.15:0,54,1278	0/0:60,0:51:57.30:0,57,1302	0/0:67,0:54:86.60:0,87,1850	0/0:47,0:39:44.29:0,44,1217	0/0:43,21:51:4.63:0,5,64	0/0:37,20:40:1.36:0,1,3	0/0:38,0:29:31.12:0,31,382	0/0:30,0:27:26.70:0,27,884	0/1:35,4:23:72.93:73,0,266	0/1:26,10:24:0.05:0,0,74	0/0:143,2:101:99:0,115,2721	0/0:26,18:35:0.06:0,0,1	0/0:42,0:39:70.95:0,71,1772	0/0:48,0:42:48.14:0,48,969	0/0:23,12:25:2.90:0,3,16	0/1:51,9:36:99:476,0,217	0/1:31,8:35:61.77:169,0,62	0/0:14,1:10:4.17:0,4,21
chr10	5885425	.	GTA	G	358.66	PASS	AB=0.985;AC=14;AF=0.269;AN=52;BaseQRankSum=11.011;DP=1324;FS=5.948;HRun=0;HaplotypeScore=187.7925;InbreedingCoeff=0.1534;MQ=33.64;MQ0=194;MQRankSum=-5.992;QD=0.64;ReadPosRankSum=-5.171;VQSLOD=0.7926;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:60,0:43:5.88:46,6,0	0/0:31,0:27:21.55:0,22,602	./.	./.	0/0:37,0:35:51.17:0,51,954	0/0:29,2:21:0.47:0,0,1	0/1:61,2:44:0.23:0,0,0	0/0:63,0:12:24.01:0,24,268	0/1:55,4:40:45.36:67,0,45	0/0:69,0:47:87.78:0,88,1752	0/0:36,0:31:35.23:0,35,1006	0/0:59,0:50:23.44:0,23,1084	0/0:69,0:55:69.81:0,70,1491	0/0:49,0:39:30.25:0,30,881	0/1:63,1:50:19.41:19,0,48	1/1:57,0:39:3.78:12,4,0	0/1:33,0:24:62.45:62,0,87	0/0:31,0:28:1.06:0,1,544	0/1:37,0:21:26.74:27,0,144	0/1:33,0:23:17.96:18,0,92	0/0:150,1:107:90.26:0,90,2058	0/1:47,0:38:14.38:14,0,32	0/0:41,0:38:32.64:0,33,1299	0/0:47,0:41:48.03:0,48,733	0/0:32,1:22:3:0,3,25	0/1:68,1:41:95.65:142,0,96	1/1:38,2:34:14.11:98,14,0	0/0:15,0:10:5.77:0,6,34
chr10	5885427	.	ATG	A	90.25	PASS	AB=0.986;AC=4;AF=0.077;AN=52;BaseQRankSum=4.091;DP=1329;FS=0.000;HRun=0;HaplotypeScore=194.1494;InbreedingCoeff=0.3714;MQ=33.87;MQ0=195;MQRankSum=-4.608;QD=0.55;ReadPosRankSum=-1.446;VQSLOD=2.2031;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:55,2:45:3.43:0,3,26	0/0:30,1:27:39.22:0,39,610	./.	./.	0/0:36,0:35:54.18:0,54,889	0/0:30,1:21:0:0,0,0	0/1:63,0:44:0.01:0,0,0	0/0:63,0:12:23.82:0,24,249	0/0:56,1:38:4.56:0,5,58	0/0:71,0:49:99:0,108,1721	0/0:36,0:32:60.21:0,60,1008	0/0:60,0:51:69.62:0,70,1094	0/0:69,0:55:90.13:0,90,1420	0/0:50,0:39:51.14:0,51,827	0/0:66,1:53:7.84:0,8,78	0/0:55,1:38:0.76:0,1,1	1/1:29,4:24:3.97:95,4,0	0/0:31,0:27:41.61:0,42,584	0/0:36,0:19:22.58:0,23,193	0/0:33,0:23:9.92:0,10,144	0/0:153,1:109:99:0,133,2023	0/0:43,0:34:5.94:0,6,79	0/0:41,0:38:78.27:0,78,1310	0/0:47,1:42:47.98:0,48,647	0/0:34,0:23:3.01:0,3,48	0/1:65,2:39:84.89:85,0,173	0/0:40,0:34:11.63:0,12,78	0/0:15,0:10:6.02:0,6,68
chr10	5885437	.	GTA	G	468.95	PASS	AB=0.976;AC=12;AF=0.231;AN=52;BaseQRankSum=7.881;DP=1354;FS=4.757;HRun=0;HaplotypeScore=206.2465;InbreedingCoeff=0.3373;MQ=34.38;MQ0=182;MQRankSum=-8.939;QD=0.95;ReadPosRankSum=-3.748;VQSLOD=1.9753;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:68,0:51:17.98:0,18,168	0/0:28,0:24:39.56:0,40,671	./.	./.	0/0:41,0:39:66.16:0,66,1124	1/1:33,0:23:1.94:9,2,0	0/1:54,4:42:0.41:1,0,0	0/1:82,0:24:93.16:93,0,187	0/1:61,2:45:31.23:31,0,45	0/0:75,0:52:99:0,101,2009	0/0:35,0:32:57.15:0,57,1138	0/0:55,0:48:67.26:0,67,1234	0/0:69,0:55:98.28:0,98,1648	0/0:52,0:41:61.93:0,62,938	0/1:65,1:54:4.55:5,0,38	0/1:56,0:40:2.51:22,0,3	0/1:29,0:20:16.06:37,0,16	0/0:30,0:27:39.21:0,39,631	0/0:34,0:15:5.36:0,5,165	0/0:35,0:25:14.06:0,14,191	0/0:157,0:111:99:0,136,2272	0/0:44,0:35:8.65:0,9,113	0/0:38,0:35:78.25:0,78,1465	0/0:49,0:43:54.08:0,54,804	0/0:36,0:25:3.01:0,3,41	1/1:55,10:40:9.17:350,9,0	1/1:36,3:33:8.82:62,9,0	0/0:14,1:10:5.82:0,6,35
chr10	5885449	.	GTA	G	435.29	PASS	AB=0.991;AC=16;AF=0.308;AN=52;BaseQRankSum=8.949;DP=1349;FS=18.476;HRun=0;HaplotypeScore=231.0374;InbreedingCoeff=0.1536;MQ=36.42;MQ0=142;MQRankSum=-6.899;QD=0.80;ReadPosRankSum=-3.813;VQSLOD=0.4628;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:65,0:49:27:0,27,413	0/0:30,0:25:28.88:0,29,724	./.	./.	0/0:42,0:41:68.11:0,68,1159	1/1:30,0:20:2.40:9,2,0	1/1:55,4:45:2.50:17,2,0	0/0:84,0:39:7.36:0,7,593	0/1:64,1:49:15.32:15,0,44	0/0:72,0:56:99:0,138,2108	0/0:39,0:36:68.19:0,68,1227	0/0:62,0:56:88.67:0,89,1379	0/0:67,0:54:99:0,102,1797	0/0:53,0:43:71.39:0,71,1068	0/1:62,1:50:19.05:27,0,19	1/1:57,0:40:6.76:31,7,0	0/1:27,0:19:12.20:12,0,74	0/0:31,0:29:30.03:0,30,647	0/1:27,0:14:13.55:14,0,78	0/1:36,0:27:7.73:8,0,33	0/0:161,0:122:99:0,117,2371	0/1:42,2:35:5.93:6,0,14	0/0:40,0:36:83.59:0,84,1383	0/0:50,0:44:53.90:0,54,749	1/1:34,0:24:0.89:2,1,0	0/1:59,0:41:24.14:380,0,24	0/1:40,0:35:3.30:58,0,3	0/0:12,0:9:2.92:0,3,17
chr10	5885451	.	A	ATG	1047.09	PASS	AB=0.967;AC=17;AF=0.327;AN=52;BaseQRankSum=8.158;DP=1331;FS=23.078;HRun=0;HaplotypeScore=233.4349;InbreedingCoeff=0.2680;MQ=36.83;MQ0=139;MQRankSum=-6.221;QD=1.81;ReadPosRankSum=-3.252;VQSLOD=0.9534;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:59,0:46:26.98:0,27,340	0/0:30,0:25:42.56:0,43,517	./.	./.	0/0:42,0:41:66:0,66,791	1/1:28,0:19:2.92:17,3,0	1/1:56,0:44:0.86:4,1,0	0/1:89,1:45:99:159,0,446	0/1:63,2:49:27.92:33,0,28	0/0:69,0:55:99:0,120,1423	0/0:39,0:36:72.11:0,72,861	0/0:61,0:55:87.10:0,87,1051	0/0:66,0:53:96.16:0,96,1182	0/0:56,0:46:63.15:0,63,753	0/1:57,0:45:16.67:97,0,17	1/1:57,0:40:11.29:91,11,0	0/1:21,4:18:29.45:76,0,29	0/0:31,0:29:33.10:0,33,418	0/1:26,0:15:3.59:4,0,58	0/0:36,0:27:7.92:0,8,77	0/0:161,0:122:99:0,138,1663	0/1:43,1:35:20.63:21,0,34	0/0:40,0:37:72.21:0,72,887	0/0:48,0:42:38.85:0,39,452	1/1:32,0:22:6.91:49,7,0	0/1:56,2:42:86.28:475,0,86	1/1:40,0:35:23.99:183,24,0	0/0:12,0:9:2.84:0,3,14
chr10	5885455	.	G	GTA	572.51	PASS	AB=0.925;AC=17;AF=0.327;AN=52;BaseQRankSum=8.466;DP=1309;FS=27.511;HRun=0;HaplotypeScore=236.9443;InbreedingCoeff=0.2993;MQ=37.45;MQ0=128;MQRankSum=-2.052;QD=1.11;ReadPosRankSum=-0.323;VQSLOD=1.0026;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:43:27.09:0,27,412	0/0:30,0:25:48.51:0,49,680	./.	./.	0/0:44,0:43:75.20:0,75,1063	1/1:19,10:20:2.99:24,3,0	1/1:54,0:43:1.52:13,2,0	0/0:91,0:48:22.19:0,22,927	0/1:47,16:47:16.52:17,0,38	0/0:69,0:55:99:0,135,1931	0/0:39,0:36:75.24:0,75,1116	0/0:62,0:56:90.28:0,90,1348	0/0:66,0:53:99:0,102,1501	0/0:51,0:41:77.87:0,78,1056	0/1:33,24:45:41.19:125,0,41	1/1:36,17:37:12:138,12,0	0/1:26,0:19:30.57:31,0,81	0/0:30,0:28:19.11:0,19,506	0/1:28,0:16:12.28:12,0,92	0/1:34,0:25:29.16:29,0,30	0/0:157,0:121:99:0,160,2222	1/1:41,0:33:8.01:26,8,0	0/0:40,0:36:84.22:0,84,1189	0/0:48,0:42:48.04:0,48,646	1/1:22,11:23:8.53:105,9,0	0/1:55,0:41:99:139,0,208	0/1:40,1:36:2.35:77,0,2	0/0:10,0:7:2.22:0,2,7
chr10	5885459	.	GTGTA	G	1435.48	PASS	AB=0.960;AC=20;AF=0.385;AN=52;BaseQRankSum=6.144;DP=1285;FS=34.611;HRun=0;HaplotypeScore=257.0647;InbreedingCoeff=0.3658;MQ=38.40;MQ0=115;MQRankSum=-4.537;QD=2.41;ReadPosRankSum=-1.055;VQSLOD=1.4232;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:43:30.08:0,30,691	0/0:28,0:24:33.24:0,33,996	./.	./.	0/0:44,0:43:80.91:0,81,1522	1/1:27,1:19:2.46:56,2,0	1/1:49,4:42:6.41:78,6,0	0/1:86,0:48:31.40:31,0,1059	0/1:46,17:50:4.98:5,0,31	0/0:70,0:56:99:0,135,2657	0/0:39,0:36:75.24:0,75,1564	0/0:58,0:53:93.30:0,93,2041	0/0:66,0:53:99:0,102,2007	0/0:51,0:41:72.23:0,72,1492	0/1:50,3:42:21.56:215,0,22	1/1:48,2:35:15.06:178,15,0	0/1:28,0:21:10.34:10,0,137	0/0:31,0:29:37.31:0,37,748	0/1:26,1:16:60.82:129,0,61	1/1:35,1:27:10.27:131,10,0	0/0:159,0:124:99:0,161,3057	1/1:38,3:33:17.34:199,17,0	0/0:39,0:36:81.24:0,81,1613	0/0:49,0:43:44.79:0,45,793	1/1:31,1:23:16.93:167,17,0	0/1:52,1:39:99:262,0,201	0/1:36,0:32:1.16:143,0,1	0/1:8,0:6:7.64:8,0,9
chr10	5885461	.	GTA	G	440.84	PASS	AB=0.980;AC=15;AF=0.288;AN=52;BaseQRankSum=5.928;DP=1255;FS=16.604;HRun=0;HaplotypeScore=237.9197;InbreedingCoeff=0.3626;MQ=38.94;MQ0=109;MQRankSum=-0.656;QD=1.10;ReadPosRankSum=-3.193;VQSLOD=0.7368;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:46:33.07:0,33,561	0/0:28,0:24:23.65:0,24,762	./.	./.	0/0:42,0:41:71.88:0,72,1266	1/1:27,0:18:2.40:19,2,0	1/1:49,0:40:5.53:43,6,0	0/0:81,3:47:73.88:0,74,1325	0/0:60,0:48:8.27:0,8,49	0/0:66,0:53:99:0,135,2214	0/0:39,0:36:75.23:0,75,1344	0/0:56,0:53:88.51:0,89,1614	0/0:64,0:52:99:0,105,1753	0/0:50,0:41:75.20:0,75,1270	0/1:51,2:42:17.85:66,0,18	1/1:49,0:34:13.17:79,13,0	0/0:27,0:21:8.97:0,9,163	0/0:31,0:29:39.06:0,39,667	0/1:25,1:15:59.78:60,0,101	0/1:34,0:26:22.34:73,0,22	0/0:157,0:123:99:0,148,2574	1/1:41,0:33:0.45:113,0,0	0/0:39,0:37:84.22:0,84,1424	0/0:49,0:43:38.02:0,38,653	1/1:31,0:21:14.80:84,15,0	0/1:54,0:39:22.82:23,0,292	0/1:34,1:32:40.97:41,0,53	0/0:8,0:6:3.79:0,4,18
chr10	5885473	.	GTA	G	1352.46	PASS	AB=0.994;AC=17;AF=0.304;AN=56;BaseQRankSum=1.688;DP=1167;FS=3.439;HRun=0;HaplotypeScore=218.0078;InbreedingCoeff=-0.3303;MQ=42.00;MQ0=81;MQRankSum=6.607;QD=1.92;ReadPosRankSum=8.145;VQSLOD=1.5007;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:57,1:47:3.71:0,4,32	0/1:26,0:24:79.91:81,0,80	1/1:4,0:1:2.88:15,3,0	0/1:4,0:2:2.20:2,0,20	0/1:38,0:38:99:108,0,164	0/0:22,0:14:3.01:0,3,42	0/0:49,0:39:17.41:0,17,239	0/0:70,0:45:76.03:0,76,720	0/1:50,1:42:2.35:2,0,133	0/1:56,0:47:99:144,0,282	0/1:34,1:32:99:113,0,196	0/1:54,1:52:99:187,0,201	0/1:53,0:46:99:120,0,249	0/1:46,0:39:76.69:177,0,77	0/0:50,0:41:28.58:0,29,318	0/0:42,0:29:20.08:0,20,421	0/1:31,0:24:31.45:74,0,31	0/1:31,0:29:40.17:40,0,121	0/0:27,0:18:27.05:0,27,478	0/0:33,0:26:25.16:0,25,639	0/1:139,0:112:99:268,0,270	0/0:38,0:31:28.38:0,28,453	0/1:37,0:35:78.49:78,0,239	0/1:49,0:43:52.62:70,0,53	0/0:29,0:21:29.82:0,30,415	0/1:49,1:38:24.20:24,0,225	0/0:33,0:30:0.25:0,0,45	0/0:10,0:8:10.82:0,11,51
chr10	5885475	.	ATG	A	6862.56	PASS	AB=0.643;AC=30;AF=0.536;AN=56;BaseQRankSum=-9.084;DP=1168;FS=10.084;HRun=0;HaplotypeScore=205.1201;InbreedingCoeff=0.6080;MQ=42.23;MQ0=78;MQRankSum=4.218;QD=9.20;ReadPosRankSum=6.056;VQSLOD=3.3678;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:58,0:49:42.13:336,42,0	1/1:10,16:24:27.08:316,27,0	1/1:4,0:1:0.47:1,0,0	0/0:5,0:3:4.88:0,5,54	0/1:12,25:37:4.68:509,0,5	0/0:22,0:14:2.96:0,3,19	0/0:48,1:39:19.60:0,20,162	0/0:70,0:48:4.46:0,4,165	0/0:51,0:42:8.68:0,9,99	1/1:28,26:47:76:865,76,0	1/1:19,16:32:39.12:455,39,0	1/1:25,28:50:9.80:612,10,0	1/1:26,25:46:51.90:567,52,0	1/1:19,28:40:57.17:664,57,0	0/0:48,0:40:22.92:0,23,179	0/0:42,0:29:31.10:0,31,277	0/1:16,14:24:31.01:216,0,31	0/1:17,15:30:8.02:188,0,8	0/0:29,0:20:33:0,33,322	0/0:34,0:27:42.68:0,43,383	1/1:99,37:112:51.99:1076,52,0	0/0:36,2:31:3.50:0,4,236	1/1:19,19:35:39.12:457,39,0	1/1:19,26:41:29.89:316,30,0	0/0:30,0:22:25.82:0,26,251	1/1:33,0:39:27.55:206,28,0	0/1:12,0:30:16.91:39,0,17	1/1:10,0:8:8.33:38,8,0
chr10	5885479	.	G	GTA	770.41	PASS	AB=0.981;AC=5;AF=0.089;AN=56;BaseQRankSum=1.831;DP=1156;FS=3.974;HRun=0;HaplotypeScore=229.3751;InbreedingCoeff=0.2761;MQ=42.48;MQ0=76;MQRankSum=-2.848;QD=4.76;ReadPosRankSum=-1.370;VQSLOD=2.9478;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:60,1:51:12.12:0,12,432	0/0:25,0:23:25.17:0,25,264	0/0:7,0:2:6.02:0,6,83	0/0:9,0:7:15.86:0,16,170	0/0:37,0:37:65.21:0,65,491	0/0:21,0:13:2.26:0,2,11	0/0:51,0:42:18.60:0,19,85	0/1:70,0:49:46.75:47,0,482	0/0:54,0:45:14:0,14,80	0/0:49,0:43:67.46:0,67,711	0/0:30,0:27:56.28:0,56,411	0/0:50,0:47:76.33:0,76,603	0/0:48,1:43:19.54:0,20,435	0/0:46,0:40:67.52:0,68,466	0/0:49,0:39:23.01:0,23,102	0/0:41,1:30:34.76:0,35,149	0/0:30,0:25:31.59:0,32,184	0/0:32,0:30:38.59:0,39,252	0/0:33,0:24:48.64:0,49,221	0/0:33,0:26:43.54:0,44,195	0/0:135,0:110:99:0,154,1095	0/0:37,0:30:27.57:0,28,139	0/0:36,0:33:67.75:0,68,485	0/0:48,0:42:41.54:0,42,296	0/0:30,0:23:32.11:0,32,139	0/1:50,0:38:99:494,0,110	0/1:32,2:30:10.61:208,0,11	1/1:3,5:6:9.03:139,9,0
chr10	5885499	.	GTA	G	2374.08	PASS	AB=0.993;AC=14;AF=0.250;AN=56;BaseQRankSum=6.496;DP=1006;FS=21.325;HRun=0;HaplotypeScore=201.0561;InbreedingCoeff=-0.1268;MQ=52.04;MQ0=30;MQRankSum=1.098;QD=4.45;ReadPosRankSum=9.731;VQSLOD=0.6970;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:41,18:53:68.71:852,69,0	0/1:21,0:20:76.02:89,0,76	0/0:26,0:17:29.84:0,30,431	0/0:27,0:22:55.11:0,55,571	0/1:31,0:31:94.68:121,0,95	0/0:17,0:14:17.97:0,18,161	0/0:43,0:36:33.02:0,33,411	0/0:41,0:36:59.24:0,59,581	0/0:52,0:43:22.38:0,22,280	0/1:39,0:37:99:152,0,140	0/1:21,0:21:51.42:102,0,51	0/1:41,1:40:68.21:200,0,68	0/1:40,0:35:10.63:200,0,11	0/1:35,2:35:11.21:224,0,11	0/0:43,0:34:30.04:0,30,481	0/0:35,0:26:51.32:0,51,654	0/1:29,0:27:61.66:62,0,97	0/1:29,0:27:60.81:62,0,61	0/0:24,0:21:59.44:0,59,728	0/0:35,0:31:69.11:0,69,909	0/1:113,1:96:99:303,0,316	0/0:31,0:28:46.39:0,46,674	0/1:27,0:26:22.95:121,0,23	0/1:45,0:40:49.06:49,0,152	0/0:27,0:23:44.70:0,45,612	0/0:31,0:27:9.74:0,10,171	0/0:31,0:29:26.07:0,26,173	0/0:9,0:7:13.67:0,14,75
chr10	5886197	.	CAG	C	936.18	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.384;DP=533;FS=0.784;HRun=0;HaplotypeScore=59.9167;InbreedingCoeff=0.9406;MQ=88.94;MQ0=0;MQRankSum=-3.033;QD=31.21;ReadPosRankSum=2.607;VQSLOD=5.4746;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,28:30:72.24:1031,72,0	0/0:8,0:8:24.08:0,24,431	0/0:26,0:26:72.22:0,72,1234	0/0:15,0:15:39.13:0,39,690	0/0:25,0:25:69.22:0,69,1228	0/0:27,0:27:75.24:0,75,1335	0/0:11,0:11:33.10:0,33,575	0/0:30,0:30:90.30:0,90,1610	0/0:19,0:19:54.19:0,54,983	0/0:23,0:23:63.20:0,63,1096	0/0:19,0:19:57.20:0,57,1039	0/0:11,0:11:33.11:0,33,605	0/0:12,0:13:30.10:0,30,535	0/0:19,0:19:51.17:0,51,935	0/0:21,0:21:63.22:0,63,1141	0/0:25,0:25:75.23:0,75,1309	0/0:19,0:19:54.19:0,54,989	0/0:15,0:15:39.08:0,39,650	0/0:13,0:13:24.08:0,24,431	0/0:15,0:15:42.14:0,42,764	0/0:26,0:26:78.25:0,78,1396	0/0:25,0:25:66.23:0,66,1203	0/0:21,0:21:54.17:0,54,959	0/0:17,0:17:51.17:0,51,934	0/0:20,0:20:51.17:0,51,897	0/0:18,0:18:48.15:0,48,826	0/0:19,0:19:54.18:0,54,965	0/0:3,0:3:9.03:0,9,165
chr10	5886482	.	A	AAGGACAG	2054.24	PASS	AB=0.857;AC=36;AF=0.947;AN=38;BaseQRankSum=-1.641;DP=45;FS=0.000;HRun=0;HaplotypeScore=17.5177;InbreedingCoeff=-0.0373;MQ=118.58;MQ0=0;MQRankSum=-1.003;QD=45.65;ReadPosRankSum=-1.185;VQSLOD=2.7577;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	./.	1/1:2,0:5:12.04:230,12,0	0/1:3,1:5:7.35:289,0,7	1/1:3,0:3:9.02:206,9,0	1/1:2,0:2:6.01:75,6,0	1/1:3,0:3:5.99:95,6,0	1/1:1,0:1:3.01:56,3,0	1/1:2,0:2:6.02:116,6,0	1/1:2,0:2:6.02:112,6,0	./.	./.	1/1:3,0:3:9:138,9,0	1/1:2,0:2:5.98:70,6,0	1/1:3,0:3:6.02:115,6,0	1/1:2,0:2:6.02:119,6,0	./.	./.	1/1:2,0:2:3:28,3,0	./.	1/1:2,0:2:3.01:98,3,0	1/1:2,0:2:6.01:130,6,0	0/1:1,0:1:0:0,0,0	1/1:2,0:2:3.01:72,3,0	1/1:1,0:1:3.01:113,3,0	./.	1/1:2,0:2:5.99:71,6,0	./.
chr10	5888181	.	A	ATGG	16945.17	PASS	AB=0.841;AC=40;AF=0.714;AN=56;BaseQRankSum=-7.628;DP=720;FS=2.821;HRun=0;HaplotypeScore=106.7310;InbreedingCoeff=0.8299;MQ=73.86;MQ0=2;MQRankSum=-1.750;QD=31.61;ReadPosRankSum=2.628;VQSLOD=5.5187;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:23:35.71:0,36,251	1/1:3,8:11:24.08:488,24,0	0/0:31,0:25:27.09:0,27,377	0/0:34,0:29:54.02:0,54,654	1/1:8,12:20:35.55:626,36,0	1/1:12,16:28:33.07:629,33,0	1/1:5,19:26:47.89:973,48,0	0/0:21,0:21:27.08:0,27,367	1/1:4,19:23:51.17:1019,51,0	1/1:7,17:24:54.16:996,54,0	1/1:6,13:19:24.04:447,24,0	1/1:8,20:28:54.19:1096,54,0	1/1:5,13:19:30.10:610,30,0	1/1:10,23:33:51.18:1036,51,0	1/1:7,23:30:48.64:977,49,0	1/1:4,25:30:69.24:1403,69,0	0/0:9,0:35:59.52:0,60,419	1/1:6,12:18:33.08:630,33,0	1/1:16,12:26:44.50:816,45,0	1/1:6,9:19:21.54:405,22,0	1/1:13,22:37:45.15:915,45,0	1/1:10,16:27:39.13:792,39,0	0/1:17,11:28:12.38:518,0,12	1/1:5,37:42:96.33:1950,96,0	1/1:7,12:19:30.10:604,30,0	0/1:26,1:27:15.85:16,0,553	0/0:20,0:20:54.14:0,54,731	0/0:20,0:20:51.17:0,51,730
chr10	5888699	.	CT	C	11800.16	PASS	AB=0.929;AC=27;AF=0.482;AN=56;BaseQRankSum=8.958;DP=715;FS=7.858;HRun=1;HaplotypeScore=110.7510;InbreedingCoeff=0.9526;MQ=81.26;MQ0=0;MQRankSum=-3.369;QD=37.34;ReadPosRankSum=0.283;VQSLOD=4.1872;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,102,1614	0/1:12,1:13:2.83:3,0,508	0/0:28,0:28:81.23:0,81,1178	0/0:20,0:20:55.97:0,56,786	0/0:30,0:30:87.28:0,87,1367	1/1:0,22:22:60.20:838,60,0	1/1:0,18:18:48.16:671,48,0	1/1:0,25:25:75.25:1047,75,0	1/1:0,26:26:66.22:922,66,0	0/0:32,0:32:96.33:0,96,1536	0/0:25,0:25:72.21:0,72,1102	0/0:27,0:27:81.26:0,81,1272	0/0:28,0:28:81.26:0,81,1272	0/0:29,0:29:87.23:0,87,1295	1/1:0,31:31:87.29:1216,87,0	1/1:0,20:20:60.20:838,60,0	0/0:40,0:40:99:0,117,1841	0/0:15,0:15:45.15:0,45,710	1/1:0,21:21:63.19:857,63,0	1/1:1,39:40:99:1537,111,0	0/0:33,0:33:99:0,99,1536	1/1:0,21:21:54.18:754,54,0	0/0:28,0:28:84.29:0,84,1334	0/0:30,0:30:90.25:0,90,1387	1/1:0,30:30:81.27:1132,81,0	1/1:1,16:17:23.34:642,23,0	1/1:0,20:20:60.20:838,60,0	1/1:0,12:12:36.12:503,36,0
chr10	5889988	.	G	GAGTCTCTC	32302.71	PASS	AB=0.609;AC=25;AF=0.446;AN=56;BaseQRankSum=-17.721;DP=596;FS=0.658;HRun=0;HaplotypeScore=148.8540;InbreedingCoeff=0.9366;MQ=67.69;MQ0=0;MQRankSum=-18.030;QD=101.26;ReadPosRankSum=0.980;VQSLOD=5.3489;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:54.19:0,54,1435	0/0:11,0:11:30.09:0,30,780	0/0:18,0:18:45.15:0,45,1173	0/0:7,0:7:18.06:0,18,491	0/0:30,0:30:84.29:0,84,2281	1/1:12,21:33:72.25:3151,72,0	1/1:7,6:17:36.12:1483,36,0	1/1:18,10:33:84.29:3102,84,0	1/1:4,17:21:54.19:2366,54,0	0/0:27,0:27:75.26:0,75,2047	0/0:21,0:21:63.22:0,63,1739	0/0:21,0:21:57.20:0,57,1570	0/0:26,0:26:72.25:0,72,2009	0/0:21,0:21:60.21:0,60,1666	1/1:10,17:28:63.22:2741,63,0	1/1:3,13:17:42.14:1841,42,0	0/0:20,0:20:54.19:0,54,1455	0/0:6,0:6:18.06:0,18,504	1/1:4,8:15:42.13:1619,42,0	1/1:9,22:36:75.26:3279,75,0	0/0:18,0:18:45.05:0,45,1185	1/1:4,19:27:63.22:2749,63,0	0/0:16,0:16:45.15:0,45,1257	0/0:15,0:15:42.14:0,42,1132	1/1:2,26:31:81.28:3549,81,0	0/1:10,18:28:5.70:3053,0,6	1/1:10,17:28:66.23:2842,66,0	1/1:1,3:4:12.04:527,12,0
chr10	5890584	.	G	GATA	17535.96	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-18.439;DP=749;FS=2.820;HRun=0;HaplotypeScore=96.2586;InbreedingCoeff=0.9992;MQ=78.81;MQ0=1;MQRankSum=-6.919;QD=49.54;ReadPosRankSum=-1.229;VQSLOD=6.4218;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,132,2112	0/0:19,0:19:51.17:0,51,820	0/0:32,0:31:75.24:0,75,1155	0/0:22,0:22:60.11:0,60,896	0/0:30,0:30:87.30:0,87,1398	1/1:4,22:26:51.09:1033,51,0	1/1:4,23:26:54.19:1192,54,0	1/1:8,22:31:72.24:1539,72,0	1/1:4,24:28:69.24:1494,69,0	0/0:27,0:27:81.28:0,81,1302	0/0:26,0:26:75.26:0,75,1199	0/0:22,0:22:66.23:0,66,1060	0/0:28,0:28:84.29:0,84,1348	0/0:31,0:31:78.27:0,78,1247	1/1:3,26:29:72.25:1586,72,0	1/1:2,26:28:78.20:1630,78,0	0/0:29,0:29:78.27:0,78,1253	0/0:9,0:9:24.08:0,24,386	1/1:7,27:35:87.27:1835,87,0	1/1:4,29:34:72.16:1496,72,0	0/0:27,0:27:75.26:0,75,1205	1/1:4,20:24:60.07:1125,60,0	0/0:26,0:26:68.97:0,69,1108	0/0:22,0:22:54.17:0,54,841	1/1:3,25:28:72.16:1497,72,0	1/1:2,25:27:75.26:1654,75,0	1/1:5,20:27:45.63:992,46,0	1/1:2,8:10:21.07:464,21,0
chr10	5892221	.	CGT	C	14276.94	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-0.917;DP=612;FS=0.740;HRun=0;HaplotypeScore=113.7316;InbreedingCoeff=0.9216;MQ=70.42;MQ0=5;MQRankSum=-2.847;QD=25.31;ReadPosRankSum=5.944;VQSLOD=5.7953;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,21:27:51.16:623,51,0	1/1:0,4:4:12.04:147,12,0	0/0:20,1:17:37.89:0,38,516	0/0:27,0:20:9.37:0,9,348	1/1:5,24:30:60.19:733,60,0	1/1:10,24:34:66.21:806,66,0	1/1:7,12:19:9.18:343,9,0	1/1:13,25:38:75.18:864,75,0	1/1:3,21:25:54:637,54,0	1/1:2,25:27:72.21:865,72,0	1/1:4,20:24:48.15:586,48,0	1/1:7,18:25:47.90:583,48,0	1/1:4,18:22:57.17:684,57,0	1/1:1,23:24:63.20:767,63,0	1/1:3,9:12:18.06:220,18,0	1/1:2,12:14:33.10:403,33,0	1/1:0,17:17:45.14:550,45,0	1/1:1,14:15:21.09:455,21,0	1/1:5,13:18:39.06:427,39,0	1/1:8,24:32:37.02:617,37,0	1/1:4,13:17:33.10:403,33,0	1/1:1,17:19:35.94:417,36,0	1/1:6,10:16:30.09:367,30,0	1/1:1,13:14:33.10:403,33,0	1/1:2,19:21:48.15:586,48,0	1/1:2,19:21:54.08:617,54,0	1/1:8,25:33:63.09:769,63,0	1/1:3,12:15:33.10:403,33,0
chr10	5894216	.	TAC	T	232.30	PASS	AB=0.961;AC=12;AF=0.214;AN=56;BaseQRankSum=3.591;DP=849;FS=23.229;HRun=0;HaplotypeScore=265.5457;InbreedingCoeff=-0.2656;MQ=52.55;MQ0=10;MQRankSum=-5.830;QD=0.66;ReadPosRankSum=-8.430;VQSLOD=-0.5349;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:43,4:46:4.35:4,0,1127	0/0:12,0:12:26.56:0,27,372	0/0:65,0:32:82.78:0,83,1456	0/0:66,0:29:63.15:0,63,1001	0/0:20,0:20:14.15:0,14,588	0/0:28,0:28:27.50:0,27,1087	0/1:30,0:30:10.83:11,0,1186	0/1:39,1:39:9.96:10,0,1825	0/1:24,0:24:68.05:68,0,806	0/0:29,0:29:73.81:0,74,1285	0/0:15,0:15:9.12:0,9,473	0/1:27,0:27:8.22:8,0,795	0/1:24,0:24:16.43:16,0,568	0/0:26,0:26:10.21:0,10,850	0/1:27,0:27:64.85:65,0,902	0/0:34,0:34:30.01:0,30,1529	0/1:17,8:25:13.80:14,0,468	0/0:14,0:14:11.74:0,12,293	0/0:17,0:17:47.92:0,48,816	0/0:37,0:37:39.58:0,40,1509	0/0:44,0:44:68.34:0,68,1286	0/0:33,0:33:15.84:0,16,988	0/1:25,0:25:29.27:29,0,651	0/1:31,0:31:25.53:26,0,414	0/0:34,0:34:29.65:0,30,1359	0/1:30,1:31:85.91:86,0,1369	0/1:19,2:21:40.39:40,0,231	0/0:19,0:19:12.11:0,12,867
chr10	5894219	.	T	TTGTG	13057.83	PASS	AB=1.000;AC=51;AF=0.911;AN=56;BaseQRankSum=-0.881;DP=941;FS=0.000;HRun=0;HaplotypeScore=273.1719;InbreedingCoeff=0.6456;MQ=51.49;MQ0=11;MQRankSum=-2.195;QD=16.20;ReadPosRankSum=1.395;VQSLOD=4.0791;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:53,0:52:22.26:244,22,0	1/1:2,0:15:19.92:302,20,0	0/0:65,0:29:12.27:0,12,161	0/0:70,0:26:14.76:0,15,198	1/1:10,0:22:14.86:194,15,0	1/1:14,2:34:44.95:677,45,0	1/1:15,15:35:38.34:670,38,0	1/1:39,0:38:46.81:539,47,0	1/1:11,11:25:38.16:762,38,0	1/1:11,1:31:54.59:816,55,0	1/1:11,0:21:18.02:225,18,0	1/1:13,0:31:40.16:539,40,0	1/1:9,1:31:36.01:563,36,0	1/1:10,1:28:41.39:624,41,0	1/1:8,16:30:51.36:972,51,0	1/1:16,16:36:56.66:1221,57,0	0/1:27,0:27:0.62:3,0,1	1/1:7,0:15:8.54:159,9,0	1/1:12,6:20:1.92:510,2,0	1/1:19,18:37:2.08:994,2,0	1/1:34,0:57:10.56:100,11,0	1/1:11,17:34:38.60:786,39,0	1/1:7,0:27:34.06:414,34,0	1/1:14,0:37:19.75:221,20,0	1/1:15,21:40:53.92:1172,54,0	1/1:32,0:32:27.56:238,28,0	1/1:7,0:27:6.90:78,7,0	1/1:20,0:20:6.04:35,6,0
chr10	5896257	.	C	CG	28692.14	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=4.429;DP=775;FS=7.453;HRun=1;HaplotypeScore=137.3068;InbreedingCoeff=0.9972;MQ=89.47;MQ0=0;MQRankSum=-11.570;QD=40.02;ReadPosRankSum=5.915;VQSLOD=3.4569;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,43:44:99:1873,126,0	1/1:1,9:10:20.75:314,21,0	0/0:30,0:30:75.17:0,75,905	0/0:28,0:27:69.20:0,69,846	1/1:0,21:21:54.18:808,54,0	1/1:0,23:23:69.23:1032,69,0	1/1:1,33:34:84.28:1258,84,0	1/1:4,41:45:99:1877,132,0	1/1:1,23:24:57.18:854,57,0	1/1:2,25:27:81.25:1176,81,0	1/1:1,23:24:66.22:985,66,0	1/1:0,26:26:72.24:1077,72,0	1/1:2,24:26:69.18:1001,69,0	1/1:0,22:22:63.21:943,63,0	1/1:1,32:33:87.29:1303,87,0	1/1:3,30:33:84.28:1254,84,0	1/1:2,37:38:99:1503,102,0	1/1:0,31:31:87.26:1274,87,0	1/1:2,20:22:60.19:866,60,0	1/1:1,24:25:66.18:963,66,0	1/1:2,30:32:84.28:1258,84,0	1/1:1,18:19:42.14:627,42,0	1/1:0,16:16:45.15:673,45,0	1/1:0,31:31:84.28:1259,84,0	1/1:0,29:29:75.25:1123,75,0	1/1:1,33:34:96.32:1429,96,0	1/1:1,37:38:99:1557,105,0	1/1:0,9:9:27.09:404,27,0
chr10	5897522	.	T	TCCCATGTTGTGGTGACCACCCA	140567.33	PASS	AB=1.000;AC=51;AF=0.911;AN=56;BaseQRankSum=4.106;DP=805;FS=3.422;HRun=0;HaplotypeScore=485.3869;InbreedingCoeff=0.6242;MQ=42.09;MQ0=1;MQRankSum=-12.450;QD=184.71;ReadPosRankSum=10.213;VQSLOD=3.7970;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:26:3.05:2410,3,0	1/1:20,0:20:7.17:3771,7,0	0/0:24,0:23:63.20:0,63,2218	0/0:20,0:17:51.15:0,51,1942	1/1:23,1:27:26.06:4174,26,0	1/1:27,0:27:51.20:5144,51,0	1/1:37,0:37:55.25:6496,55,0	1/1:36,0:33:39.72:4970,40,0	1/1:37,0:37:84.28:8061,84,0	1/1:31,0:31:10.34:6231,10,0	1/1:33,0:33:37.25:5535,37,0	1/1:41,0:41:73.39:9517,73,0	1/1:39,0:39:15.41:8253,15,0	1/1:27,0:27:5.24:5209,5,0	1/1:50,0:50:99:11948,151,0	1/1:38,0:38:99:7200,114,0	1/1:8,0:8:21.03:1226,21,0	1/1:15,0:15:45.12:3147,45,0	1/1:23,0:23:7.27:3227,7,0	1/1:33,0:33:95.92:5797,96,0	1/1:19,0:19:27.08:2197,27,0	1/1:39,0:39:71.73:6433,72,0	0/1:28,0:28:25.04:3707,0,25	1/1:16,0:16:18.05:2619,18,0	1/1:38,0:38:99:7732,108,0	1/1:32,0:32:96.26:6391,96,0	1/1:31,0:30:87.30:6571,87,0	1/1:9,0:10:30.09:2603,30,0
chr10	5897527	.	T	TGTTGTGGTGACCACCC	60109.69	PASS	AB=0.799;AC=28;AF=0.500;AN=56;BaseQRankSum=10.541;DP=544;FS=4.510;HRun=0;HaplotypeScore=350.1717;InbreedingCoeff=-0.7433;MQ=46.44;MQ0=1;MQRankSum=-10.127;QD=120.22;ReadPosRankSum=15.049;VQSLOD=2.1928;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:14,1:15:99:796,0,111	0/1:5,5:10:31.23:1688,0,31	0/0:24,0:20:57.18:0,57,2048	0/0:20,0:14:42.14:0,42,1603	0/1:15,4:19:99:2048,0,157	0/1:10,5:15:73.88:1909,0,74	0/1:14,1:15:99:1218,0,190	0/1:19,0:16:99:1024,0,124	1/1:21,9:30:87.25:5270,87,0	0/1:15,5:20:99:2386,0,198	0/1:18,4:22:83.89:2236,0,84	0/1:9,12:21:14.38:3433,0,14	0/1:10,14:24:99:3949,0,105	0/1:9,7:17:99:2504,0,107	0/1:23,12:35:37.54:5185,0,38	0/1:21,7:28:56.53:3569,0,57	0/1:6,2:8:34.32:665,0,34	0/1:9,2:11:48.42:1113,0,48	0/1:13,4:17:99:1577,0,119	0/1:19,8:27:99:2920,0,430	0/1:14,0:14:99:712,0,136	0/1:22,8:30:99:3553,0,306	0/1:11,4:16:99:1589,0,200	1/1:9,1:10:1.08:1063,1,0	0/1:18,8:26:99:3331,0,164	0/1:19,3:22:99:2079,0,176	0/1:15,5:20:99:2803,0,100	0/1:5,3:8:32.89:1489,0,33
chr10	5897530	.	C	CCATAAA	20190.61	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-0.458;DP=561;FS=0.000;HRun=0;HaplotypeScore=231.2021;InbreedingCoeff=0.9891;MQ=46.36;MQ0=1;MQRankSum=-6.922;QD=38.83;ReadPosRankSum=4.724;VQSLOD=4.5434;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:18,1:19:38.74:373,39,0	1/1:5,5:10:29.90:551,30,0	0/0:23,0:18:36.15:0,36,992	0/0:18,0:12:36.03:0,36,741	1/1:15,4:19:50.53:736,51,0	1/1:9,5:14:38.36:613,38,0	1/1:14,1:15:42.22:394,42,0	1/1:23,0:20:44.70:329,45,0	1/1:21,9:30:76.53:1232,77,0	1/1:15,5:20:59.82:839,60,0	1/1:18,4:22:56.51:679,57,0	1/1:9,12:21:59.94:1225,60,0	1/1:12,13:26:74.92:1493,75,0	1/1:9,8:17:50.85:910,51,0	1/1:24,12:36:99:1534,101,0	1/1:21,7:28:79.72:1116,80,0	1/1:8,2:10:26.89:349,27,0	1/1:9,2:11:32.86:400,33,0	1/1:14,4:18:47.87:664,48,0	1/1:22,8:30:83.57:1177,84,0	1/1:14,0:14:30.65:242,31,0	1/1:24,8:32:85.63:1169,86,0	1/1:9,5:14:41.75:638,42,0	1/1:9,1:10:14.90:164,15,0	1/1:17,8:25:74.65:1125,75,0	1/1:22,3:25:71.32:887,71,0	1/1:17,6:22:65.64:874,66,0	1/1:5,3:8:23.98:476,24,0
chr10	5899928	.	TTGTGTGTGTGTGTG	T	3227.04	PASS	AB=0.757;AC=20;AF=0.370;AN=54;BaseQRankSum=6.021;DP=507;FS=27.129;HRun=0;HaplotypeScore=174.1120;InbreedingCoeff=0.6814;MQ=67.50;MQ0=13;MQRankSum=-5.973;QD=16.14;ReadPosRankSum=-1.341;VQSLOD=1.0653;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:32:5.66:6,0,95	./.	0/0:31,0:21:3.40:0,3,144	0/0:31,0:15:6.01:0,6,82	1/1:7,12:19:30.07:899,30,0	0/0:12,0:19:24.08:0,24,1006	0/0:17,0:23:36.12:0,36,1141	0/0:22,0:20:10.85:0,11,316	0/0:8,0:8:6.02:0,6,168	1/1:7,3:10:9.03:276,9,0	1/1:10,4:14:9.03:111,9,0	1/1:9,7:15:18.06:704,18,0	1/1:10,13:23:15.05:587,15,0	1/1:12,4:16:9.03:352,9,0	0/0:15,0:25:39.12:0,39,1500	0/0:16,0:26:36.12:0,36,1464	0/0:14,0:21:21.07:0,21,693	0/1:6,4:10:31.28:212,0,31	0/0:9,0:9:10.43:0,10,247	0/0:7,0:13:18.06:0,18,728	1/1:36,0:36:11.80:122,12,0	0/0:11,0:12:12.01:0,12,243	1/1:8,0:9:1.25:3,1,0	1/1:10,4:14:6.17:143,6,0	0/0:12,0:15:12.04:0,12,466	0/0:19,0:20:21.07:0,21,889	0/0:17,0:25:30.10:0,30,1075	0/0:3,0:3:6.02:0,6,234
chr10	5900382	.	CTGTTGGTTTTAG	C	16704.48	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=17.159;DP=598;FS=0.339;HRun=0;HaplotypeScore=205.2614;InbreedingCoeff=0.9921;MQ=78.34;MQ0=0;MQRankSum=-16.046;QD=77.70;ReadPosRankSum=1.929;VQSLOD=4.6710;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,111,6567	1/1:0,5:5:15.05:578,15,0	0/0:24,0:24:72.25:0,72,3704	0/0:13,0:13:36.12:0,36,1574	1/1:0,26:26:66.14:2017,66,0	0/0:22,0:22:66.21:0,66,3577	0/0:24,0:24:69.24:0,69,4164	0/0:30,0:30:87.29:0,87,4649	0/0:20,0:20:60.19:0,60,3378	1/1:1,19:20:57.05:1599,57,0	1/1:1,21:22:54.10:1711,54,0	1/1:0,23:23:54.19:2082,54,0	1/1:0,27:27:60.21:2253,60,0	1/1:0,21:21:42.14:1619,42,0	0/0:30,0:30:90.30:0,90,5386	0/0:20,0:20:60.21:0,60,3511	1/1:0,13:13:17.98:595,18,0	1/1:0,16:16:39.13:1500,39,0	0/0:21,0:21:63.22:0,63,3267	0/0:24,0:24:69.24:0,69,4199	1/1:0,13:13:12.04:459,12,0	0/0:19,0:19:57.20:0,57,3156	1/1:0,13:13:33.11:1248,33,0	1/1:0,16:16:27.09:1041,27,0	0/0:20,0:20:60.19:0,60,3463	0/0:30,0:30:87.04:0,87,4331	0/0:38,0:37:99:0,108,5820	0/0:11,0:11:33.11:0,33,1920
chr10	5901438	.	AT	A	8391.76	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-4.001;DP=642;FS=6.845;HRun=12;HaplotypeScore=76.7844;InbreedingCoeff=0.7839;MQ=73.09;MQ0=2;MQRankSum=-5.573;QD=13.65;ReadPosRankSum=4.209;VQSLOD=5.1701;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,0:34:54.99:159,55,0	1/1:1,6:7:17.93:139,18,0	0/0:18,1:17:1.31:0,1,172	0/0:8,0:6:5.23:0,5,57	1/1:7,21:31:63.11:443,63,0	1/1:6,22:28:59.76:464,60,0	1/1:2,14:17:34.89:261,35,0	1/1:7,0:38:59.44:185,59,0	1/1:5,17:22:47.79:371,48,0	1/1:1,26:29:76.69:580,77,0	1/1:5,21:27:58.49:429,58,0	1/1:3,23:27:64.66:485,65,0	1/1:5,23:28:62.75:488,63,0	1/1:2,18:20:41.82:325,42,0	1/1:3,17:20:38.77:302,39,0	1/1:4,23:28:41.76:447,42,0	1/1:3,29:32:80.68:627,81,0	1/1:2,15:17:45.71:350,46,0	1/1:4,0:17:26.48:76,26,0	1/1:5,0:27:39.87:119,40,0	1/1:1,18:19:41.84:325,42,0	1/1:3,21:24:59.57:454,60,0	1/1:3,20:23:53.77:418,54,0	1/1:2,12:14:32.87:255,33,0	1/1:3,17:20:47.80:372,48,0	1/1:4,0:23:35.84:105,36,0	1/1:1,0:30:51.56:152,52,0	1/1:2,0:12:20.36:59,20,0
chr10	5902166	.	C	CTCTCTT	11826.77	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-2.165;DP=736;FS=12.615;HRun=0;HaplotypeScore=176.1194;InbreedingCoeff=0.8580;MQ=59.24;MQ0=22;MQRankSum=1.922;QD=20.15;ReadPosRankSum=2.533;VQSLOD=3.9956;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,36:50:13.06:201,13,0	1/1:6,0:6:9:112,9,0	0/0:62,0:24:55.76:0,56,445	0/0:86,0:36:26.12:0,26,412	1/1:26,0:25:62.96:660,63,0	1/1:29,0:28:66.13:645,66,0	1/1:27,0:25:59.71:565,60,0	1/1:36,0:35:96.66:1099,97,0	1/1:21,0:20:50.84:571,51,0	1/1:25,0:25:62.44:783,62,0	1/1:18,0:18:36.47:355,36,0	1/1:26,0:26:53.36:555,53,0	1/1:26,0:26:74.97:734,75,0	1/1:23,0:23:50.36:445,50,0	1/1:19,0:17:32.89:307,33,0	1/1:23,0:22:42.48:415,42,0	1/1:22,0:22:55.66:549,56,0	1/1:4,1:19:11.99:192,12,0	1/1:13,0:12:33.92:362,34,0	1/1:23,0:23:59.99:558,60,0	1/1:15,0:14:14.83:242,15,0	1/1:18,0:17:41.14:400,41,0	1/1:16,0:16:27.18:201,27,0	1/1:15,0:15:27.34:234,27,0	1/1:25,0:24:51.73:430,52,0	1/1:2,17:23:60.24:684,60,0	1/1:7,1:20:21.06:420,21,0	1/1:2,11:17:3.01:109,3,0
chr10	5903357	.	AACACACACACACACAC	A	11688.48	PASS	AB=0.724;AC=39;AF=0.696;AN=56;BaseQRankSum=5.842;DP=643;FS=0.753;HRun=0;HaplotypeScore=298.7157;InbreedingCoeff=0.1118;MQ=56.44;MQ0=14;MQRankSum=-4.594;QD=21.69;ReadPosRankSum=1.689;VQSLOD=3.3638;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:37:1.72:6,2,0	1/1:0,0:7:17.96:408,18,0	0/0:30,0:20:6.02:0,6,97	0/0:25,0:18:6.02:0,6,101	1/1:10,0:15:1.01:12,1,0	0/1:6,18:24:24.88:575,0,25	0/1:10,14:25:19.12:320,0,19	0/1:18,0:25:47.90:65,0,48	0/1:7,1:27:23.13:226,0,23	1/1:20,0:28:30.20:1259,30,0	0/1:11,0:14:1.64:72,0,2	0/1:22,0:37:15.10:962,0,15	1/1:17,1:32:44.75:1571,45,0	1/1:16,0:27:21.23:763,21,0	1/1:10,17:28:29.93:902,30,0	1/1:5,11:19:32.69:910,33,0	0/1:13,0:13:26.29:26,0,47	0/0:11,0:10:5.38:0,5,66	1/1:5,8:13:17.99:565,18,0	1/1:10,13:23:13.24:207,13,0	0/0:36,0:38:2.17:0,2,17	1/1:7,20:27:11.93:244,12,0	0/1:7,0:13:30.87:103,0,31	0/1:25,0:28:0.58:287,0,1	1/1:6,11:17:7.69:173,8,0	1/1:17,0:22:35.55:1011,36,0	1/1:15,0:27:31.44:1007,31,0	1/1:4,0:4:3.19:14,3,0
chr10	5903458	.	GCA	G	13198.16	PASS	AB=1.000;AC=33;AF=0.589;AN=56;BaseQRankSum=11.168;DP=961;FS=8.802;HRun=0;HaplotypeScore=155.5778;InbreedingCoeff=0.9148;MQ=56.00;MQ0=27;MQRankSum=4.143;QD=23.32;ReadPosRankSum=2.587;VQSLOD=5.4988;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:43:75.25:0,75,1247	1/1:2,10:12:27.09:341,27,0	0/0:96,1:21:5.04:0,5,319	0/1:89,0:16:8.18:8,0,176	1/1:1,16:17:42.13:530,42,0	0/0:29,0:29:53.81:0,54,1057	0/0:39,1:40:55.45:0,55,1440	1/1:10,24:34:64.03:811,64,0	0/0:32,0:32:84.29:0,84,1380	1/1:8,30:38:87.28:1098,87,0	1/1:4,19:23:54.17:682,54,0	1/1:5,51:56:99:1734,138,0	1/1:2,21:23:63.20:795,63,0	1/1:3,24:27:63.20:795,63,0	0/0:34,1:35:58.46:0,58,1502	0/0:23,0:23:54.18:0,54,897	1/1:5,21:26:57.18:719,57,0	1/1:5,13:18:26.92:340,27,0	0/0:14,0:12:29.96:0,30,441	0/0:26,0:26:66.23:0,66,1097	1/1:7,69:76:99:2006,159,0	0/0:28,0:28:22.47:0,22,909	1/1:2,17:19:42.13:530,42,0	1/1:3,42:45:22.21:803,22,0	0/0:26,0:26:72.25:0,72,1192	1/1:5,24:28:69.22:871,69,0	1/1:2,26:28:75.24:946,75,0	1/1:1,4:5:15.05:189,15,0
chr10	5903600	.	G	GA	10449.88	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=-10.764;DP=711;FS=2.440;HRun=8;HaplotypeScore=107.6244;InbreedingCoeff=0.9353;MQ=80.37;MQ0=1;MQRankSum=-2.649;QD=27.36;ReadPosRankSum=0.356;VQSLOD=4.2040;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,29:29:78.23:900,78,0	0/0:11,0:11:21.01:0,21,192	0/0:26,0:26:49.66:0,50,464	0/1:20,0:20:9.31:9,0,204	0/0:24,0:24:66.03:0,66,604	1/1:5,20:25:54.16:623,54,0	1/1:3,12:15:30.09:346,30,0	1/1:1,24:25:72.18:808,72,0	1/1:3,19:23:60:663,60,0	0/0:33,0:33:99:0,99,906	0/0:33,0:33:93.05:0,93,851	0/0:36,0:36:99:0,99,897	0/0:26,0:26:65.97:0,66,591	0/0:25,0:25:66.03:0,66,604	1/1:1,23:24:60.18:692,60,0	1/1:2,23:25:44.75:769,45,0	0/0:18,0:18:48.03:0,48,439	0/0:14,0:15:38.03:0,38,328	1/1:6,12:18:39.06:427,39,0	1/1:5,34:39:99:1189,105,0	0/0:26,0:25:65.99:0,66,594	1/1:4,26:30:69.21:796,69,0	0/0:37,0:37:99:0,99,898	0/0:19,0:18:54.03:0,54,494	1/1:4,22:26:66.20:762,66,0	1/1:4,28:32:59.82:942,60,0	1/1:3,35:38:96.29:1108,96,0	1/1:0,13:13:36.11:415,36,0
chr10	5903808	.	GA	G	10407.40	PASS	AB=0.938;AC=53;AF=0.946;AN=56;BaseQRankSum=-4.056;DP=575;FS=1.242;HRun=11;HaplotypeScore=62.0167;InbreedingCoeff=0.7622;MQ=69.05;MQ0=0;MQRankSum=-1.359;QD=18.29;ReadPosRankSum=3.215;VQSLOD=5.9003;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,0:17:24.44:71,24,0	1/1:1,8:9:23.97:197,24,0	0/1:14,1:14:0.96:1,0,142	0/0:6,0:6:7.03:0,7,76	1/1:4,26:31:64.91:523,65,0	1/1:1,27:28:68.92:567,69,0	1/1:0,18:18:44.93:369,45,0	1/1:6,21:27:62.73:514,63,0	1/1:6,13:19:32.94:271,33,0	1/1:2,17:19:47.93:394,48,0	1/1:3,8:11:20.97:172,21,0	1/1:4,15:19:44.93:368,45,0	1/1:1,19:20:44.95:369,45,0	1/1:2,18:20:50.94:419,51,0	1/1:5,18:23:44.94:369,45,0	1/1:7,20:27:53.91:443,54,0	1/1:4,21:25:62.92:517,63,0	1/1:1,11:12:32.96:271,33,0	1/1:4,19:23:56.93:467,57,0	1/1:7,20:27:62.12:499,62,0	1/1:1,15:16:38.95:320,39,0	1/1:4,19:23:56.92:468,57,0	1/1:3,17:20:41.93:345,42,0	1/1:1,17:18:44.95:369,45,0	1/1:2,17:19:44.94:370,45,0	1/1:4,23:27:68.83:554,69,0	1/1:3,28:31:77.90:640,78,0	1/1:1,24:25:65.90:541,66,0
chr10	5904305	.	CCTCT	C	1675.03	PASS	AB=0.938;AC=27;AF=0.482;AN=56;BaseQRankSum=-5.641;DP=487;FS=1.777;HRun=0;HaplotypeScore=136.9772;InbreedingCoeff=-0.6116;MQ=65.48;MQ0=13;MQRankSum=-5.403;QD=4.33;ReadPosRankSum=-7.914;VQSLOD=0.1836;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:19,1:19:36.19:36,0,161	0/1:4,1:5:12.35:12,0,45	0/0:82,0:30:25.33:0,25,1035	0/1:98,0:35:3.20:3,0,650	0/1:8,1:8:7.95:8,0,72	0/1:10,2:12:78.15:78,0,119	0/1:10,4:14:61.93:237,0,62	1/1:13,3:16:20.83:379,21,0	0/1:11,1:12:51.87:52,0,81	0/1:13,1:14:69.71:81,0,70	1/1:6,0:6:5.45:60,5,0	0/0:10,0:10:7.65:0,8,100	0/1:11,0:11:2.75:3,0,102	0/1:14,1:15:99:147,0,137	0/1:9,0:9:34.54:35,0,76	0/1:15,1:16:99:150,0,150	0/1:7,2:9:29.63:101,0,30	0/1:18,0:17:72.68:73,0,94	0/1:10,2:12:60.56:95,0,61	0/1:11,0:11:46.47:46,0,108	0/1:13,3:16:9.18:9,0,44	0/0:6,1:7:4.60:0,5,33	0/1:14,0:14:22.17:22,0,117	0/1:9,0:9:8.09:8,0,50	0/1:15,0:15:12.62:13,0,97	0/1:10,0:10:78.21:83,0,78	0/1:13,0:13:54.36:54,0,148	0/1:2,0:2:16.93:45,0,17
chr10	5904309	.	T	TCCC	14305.22	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=0.225;DP=486;FS=10.073;HRun=1;HaplotypeScore=91.1995;InbreedingCoeff=0.8141;MQ=63.33;MQ0=13;MQRankSum=-1.304;QD=47.21;ReadPosRankSum=5.028;VQSLOD=4.1170;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,16:20:25.74:769,26,0	1/1:2,2:5:8.98:142,9,0	0/0:82,0:26:20.72:0,21,808	0/0:100,0:32:10.19:0,10,597	1/1:2,6:7:15.23:303,15,0	1/1:3,9:12:30.10:663,30,0	1/1:6,9:15:33.11:668,33,0	1/1:6,8:15:38.90:689,39,0	1/1:1,9:10:21.07:460,21,0	1/1:1,12:14:36.58:753,37,0	1/1:0,4:4:8.97:132,9,0	1/1:2,9:11:21.07:495,21,0	1/1:1,7:10:24.08:565,24,0	1/1:2,14:16:42.14:973,42,0	1/1:0,10:10:24.08:566,24,0	1/1:1,16:17:42.14:952,42,0	1/1:6,3:9:15.05:272,15,0	1/1:2,14:17:33.11:738,33,0	1/1:2,10:13:36.09:660,36,0	1/1:0,11:11:30.06:658,30,0	1/1:7,8:16:16.44:338,16,0	1/1:1,6:7:8.84:213,9,0	1/1:1,12:13:33.09:719,33,0	1/1:1,8:9:14.74:354,15,0	1/1:3,12:15:27.05:586,27,0	1/1:2,8:10:30.10:650,30,0	1/1:0,13:13:36.12:848,36,0	1/1:0,2:2:6.02:141,6,0
chr10	5906104	.	CTCTTTGCAGTCAGAA	C	6001.67	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=10.399;DP=750;FS=1.834;HRun=0;HaplotypeScore=326.1891;InbreedingCoeff=0.9911;MQ=84.66;MQ0=0;MQRankSum=-10.538;QD=101.72;ReadPosRankSum=1.369;VQSLOD=3.8805;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,111,7354	0/0:20,0:20:60.21:0,60,3863	0/0:24,0:24:62.93:0,63,3309	0/0:27,0:27:66.23:0,66,4115	0/0:32,0:32:90.31:0,90,6057	0/0:34,0:34:96.33:0,96,6766	0/0:28,0:28:78.27:0,78,5465	1/1:7,10:17:30.08:1101,30,0	0/0:31,0:31:93.32:0,93,6226	0/0:32,0:32:87.30:0,87,5953	0/0:11,0:11:33.11:0,33,1910	0/0:28,0:28:78.27:0,78,5325	0/0:25,0:25:69.24:0,69,4600	0/0:25,0:25:66.23:0,66,4741	0/0:40,0:40:99:0,108,7320	0/0:22,0:22:54.19:0,54,3903	0/0:42,0:42:99:0,105,6640	0/0:17,0:17:45.15:0,45,2997	0/0:17,0:17:42.14:0,42,2635	0/0:30,0:30:84.27:0,84,5526	0/0:46,0:46:99:0,123,8165	0/0:29,0:29:78.26:0,78,5412	0/0:22,0:22:60.17:0,60,3759	0/0:39,0:39:99:0,105,7296	0/0:23,0:23:69.24:0,69,4821	1/1:1,16:17:48.16:2010,48,0	1/1:3,18:21:54.19:2365,54,0	1/1:0,4:4:12.04:526,12,0
chr10	5906380	.	C	CT	1869.05	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-9.046;DP=657;FS=4.787;HRun=7;HaplotypeScore=63.0754;InbreedingCoeff=0.9977;MQ=91.86;MQ0=0;MQRankSum=-3.210;QD=26.70;ReadPosRankSum=-1.977;VQSLOD=3.6524;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,99,956	0/0:7,0:7:21.03:0,21,202	0/0:25,0:25:47.97:0,48,446	0/0:28,0:28:65.92:0,66,588	0/0:31,0:31:75.11:0,75,724	0/0:21,0:21:51.08:0,51,492	0/0:23,0:23:63.10:0,63,608	1/1:3,18:21:54.14:630,54,0	0/0:23,0:23:63.09:0,63,602	0/0:18,0:18:48.05:0,48,456	0/0:12,0:12:36.05:0,36,342	0/0:28,0:28:81.11:0,81,772	0/0:19,0:19:48.07:0,48,463	0/0:21,0:21:63.09:0,63,603	0/0:32,0:32:90.13:0,90,863	0/0:20,0:20:51.07:0,51,492	0/0:33,0:33:90.14:0,90,869	0/0:25,0:25:66.10:0,66,637	0/0:23,0:23:63.10:0,63,608	0/0:19,0:19:51.06:0,51,482	0/0:51,0:51:99:0,135,1293	0/0:21,0:21:60.08:0,60,574	0/0:19,0:19:48.07:0,48,463	0/0:25,0:25:63.08:0,63,602	0/0:24,0:24:63.09:0,63,604	1/1:1,19:20:54.15:639,54,0	1/1:2,17:19:42.13:507,42,0	1/1:1,9:10:21.06:253,21,0
chr10	5906641	.	C	CGT	25214.90	PASS	AB=0.693;AC=46;AF=0.821;AN=56;BaseQRankSum=-13.233;DP=918;FS=11.009;HRun=0;HaplotypeScore=97.9893;InbreedingCoeff=0.5653;MQ=59.62;MQ0=9;MQRankSum=1.801;QD=32.12;ReadPosRankSum=1.806;VQSLOD=6.3362;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:61,0:62:99:0,156,1893	1/1:3,7:10:18.06:295,18,0	0/0:36,0:12:13.99:0,14,121	0/1:30,0:6:7.58:8,0,40	1/1:5,29:34:38:1109,38,0	1/1:4,19:23:10.99:701,11,0	1/1:9,36:45:44.08:1242,44,0	1/1:9,18:28:57.14:850,57,0	0/1:12,33:46:10.79:1281,0,11	1/1:4,24:29:72.20:1141,72,0	0/1:3,16:19:29.16:594,0,29	1/1:14,38:51:74.63:1706,75,0	1/1:9,28:37:66.23:1081,66,0	1/1:6,30:35:84.29:1376,84,0	1/1:7,36:45:53.10:1390,53,0	1/1:4,32:37:81.28:1326,81,0	0/0:35,0:35:87.23:0,87,1061	1/1:3,25:28:63.22:1033,63,0	0/1:9,10:19:1.16:428,0,1	1/1:3,16:20:39.13:628,39,0	1/1:17,32:49:21.89:1351,22,0	1/1:4,23:28:69.24:1130,69,0	1/1:6,17:23:51.17:833,51,0	1/1:3,44:48:99:1721,105,0	1/1:6,28:34:75.24:1230,75,0	1/1:3,24:29:81.26:1259,81,0	1/1:3,25:27:75.26:1220,75,0	1/1:0,5:6:18.06:283,18,0
chr10	5908226	.	GA	G	15219.98	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=3.911;DP=618;FS=34.453;HRun=7;HaplotypeScore=64.5217;InbreedingCoeff=0.9961;MQ=86.83;MQ0=0;MQRankSum=-9.570;QD=26.47;ReadPosRankSum=5.717;VQSLOD=2.8565;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,27:29:78.17:796,78,0	1/1:1,8:9:21.05:214,21,0	0/0:18,0:18:42.13:0,42,518	0/0:24,0:25:27.13:0,27,624	1/1:3,33:36:93.21:949,93,0	1/1:1,19:20:57.13:582,57,0	1/1:2,21:23:60.14:612,60,0	1/1:1,22:23:66.15:673,66,0	1/1:1,18:19:51.12:520,51,0	1/1:1,23:24:66.14:671,66,0	1/1:3,20:23:60.13:612,60,0	1/1:3,14:17:39.08:398,39,0	1/1:3,19:22:50.97:520,51,0	1/1:3,20:23:60.14:612,60,0	1/1:3,18:21:54.12:551,54,0	1/1:1,14:15:39.09:398,39,0	1/1:1,20:21:60.13:612,60,0	1/1:1,19:20:54.12:551,54,0	1/1:3,11:14:33.02:317,33,0	1/1:3,26:29:78.18:796,78,0	1/1:7,19:26:54.11:551,54,0	1/1:0,20:20:60.14:612,60,0	1/1:3,29:32:78.17:796,78,0	1/1:2,19:21:54.12:551,54,0	1/1:4,24:28:72.15:735,72,0	1/1:1,20:21:60.14:612,60,0	1/1:6,25:31:72.16:735,72,0	1/1:0,8:8:24.05:245,24,0
chr10	5908830	.	A	ACACACG	7367.19	PASS	AB=0.967;AC=37;AF=0.661;AN=56;BaseQRankSum=-10.607;DP=886;FS=8.018;HRun=0;HaplotypeScore=245.1268;InbreedingCoeff=-0.2231;MQ=63.01;MQ0=11;MQRankSum=5.296;QD=9.04;ReadPosRankSum=-1.689;VQSLOD=2.2705;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:52,0:51:11.48:358,11,0	1/1:2,12:17:4.11:106,4,0	0/0:41,0:28:59.97:0,60,578	0/0:30,0:21:53.90:0,54,534	1/1:6,11:21:16.58:360,17,0	0/1:14,0:14:39.11:63,0,39	0/1:28,0:28:96.65:136,0,97	1/1:35,0:35:56.04:426,56,0	0/1:38,0:37:99:219,0,212	1/1:11,26:41:69.91:1038,70,0	1/1:1,14:23:2.93:103,3,0	0/1:2,21:28:6.02:369,0,6	1/1:8,17:33:24.28:611,24,0	1/1:6,21:35:14.92:517,15,0	0/1:45,0:45:99:263,0,226	0/1:52,0:52:99:322,0,168	0/1:31,0:31:49.71:145,0,50	1/1:18,2:20:50.62:721,51,0	0/1:25,0:24:81.97:82,0,175	0/1:21,0:20:63.91:120,0,64	0/1:55,0:55:16.29:29,0,16	0/1:28,0:28:99:206,0,134	1/1:27,2:28:13.61:349,14,0	1/1:11,29:45:17.71:379,18,0	0/1:22,0:22:96.68:97,0,214	0/1:30,0:30:99:196,0,196	0/1:31,0:31:89.99:90,0,219	0/1:14,0:14:61.99:62,0,64
chr10	5908832	.	A	ACACG	6319.54	PASS	AB=0.973;AC=34;AF=0.607;AN=56;BaseQRankSum=-10.450;DP=887;FS=4.649;HRun=0;HaplotypeScore=223.3981;InbreedingCoeff=-0.3539;MQ=60.83;MQ0=12;MQRankSum=3.537;QD=7.76;ReadPosRankSum=0.083;VQSLOD=3.9099;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:52,0:51:25.64:291,26,0	0/1:16,0:16:12.88:54,0,13	0/0:41,0:25:59.97:0,60,578	0/0:32,0:20:53.90:0,54,534	1/1:16,2:18:18.04:373,18,0	0/1:14,0:14:9.08:65,0,9	0/1:30,0:30:50.67:137,0,51	1/1:35,0:35:28.94:436,29,0	0/1:39,0:38:91.75:205,0,92	0/1:39,3:41:42.09:781,0,42	1/1:22,0:22:3.01:58,3,0	1/1:28,0:28:2.69:192,3,0	1/1:29,3:33:10.93:541,11,0	1/1:33,0:34:17.80:313,18,0	0/1:45,0:45:79.88:269,0,80	0/1:53,0:53:41.35:324,0,41	0/1:33,0:33:7.37:150,0,7	1/1:19,1:20:31.45:599,31,0	0/1:24,0:23:81.98:82,0,91	0/1:20,0:19:19.91:122,0,20	0/1:58,0:57:7.38:7,0,80	0/1:30,0:30:61.68:208,0,62	0/1:12,17:30:35.54:214,0,36	0/1:40,2:42:24.32:319,0,24	0/1:22,0:22:88.60:100,0,89	0/1:29,0:29:91.24:237,0,91	0/1:30,0:30:46.54:177,0,47	0/1:14,0:14:10.81:65,0,11
chr10	5908834	.	A	ACG	5822.35	PASS	AB=0.951;AC=41;AF=0.732;AN=56;BaseQRankSum=-4.419;DP=891;FS=6.428;HRun=0;HaplotypeScore=193.5717;InbreedingCoeff=0.0021;MQ=59.21;MQ0=13;MQRankSum=2.171;QD=7.16;ReadPosRankSum=5.216;VQSLOD=3.8855;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:51,2:52:40.62:337,41,0	0/1:16,0:16:25.58:26,0,33	0/0:42,0:23:59.97:0,60,578	0/0:35,0:20:56.91:0,57,573	0/1:17,1:18:2.17:149,0,2	1/1:14,0:14:13.51:140,14,0	0/1:32,0:32:15.13:219,0,15	1/1:33,0:33:24.45:433,24,0	1/1:36,0:35:20.35:264,20,0	0/1:40,1:40:99:424,0,102	1/1:22,0:22:2.87:33,3,0	0/1:29,0:29:4.88:84,0,5	0/1:32,0:32:29.16:204,0,29	0/1:33,0:33:3.35:154,0,3	1/1:46,0:46:45.11:402,45,0	1/1:54,0:54:53.44:424,53,0	1/1:34,0:34:23.30:142,23,0	1/1:17,2:19:31.42:447,31,0	0/1:25,0:24:12.36:122,0,12	1/1:18,0:17:9.61:206,10,0	0/1:25,31:59:26.73:27,0,116	1/1:29,0:29:25.94:326,26,0	0/1:27,1:27:34.97:86,0,35	0/1:41,3:44:22.85:227,0,23	1/1:23,1:24:20.96:200,21,0	1/1:29,0:29:0.84:344,1,0	1/1:30,0:30:46.86:291,47,0	1/1:14,0:14:21.61:113,22,0
chr10	5908853	.	CACACACACACAT	C	2650.29	PASS	AB=0.999;AC=20;AF=0.357;AN=56;BaseQRankSum=-7.625;DP=919;FS=4.024;HRun=0;HaplotypeScore=302.8045;InbreedingCoeff=-0.3160;MQ=53.64;MQ0=13;MQRankSum=5.270;QD=4.20;ReadPosRankSum=-7.989;VQSLOD=0.4787;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:13,43:55:30.10:813,30,0	0/1:9,0:9:12.04:12,0,289	0/0:42,0:20:59.98:0,60,640	0/0:34,0:15:33.18:0,33,433	0/1:25,0:25:99:148,0,659	0/0:20,0:20:20.95:0,21,240	0/0:38,0:38:17.91:0,18,263	0/1:36,0:36:99:348,0,479	0/0:38,0:37:9.08:0,9,321	0/1:44,0:43:99:141,0,1732	0/1:24,0:24:98.18:100,0,98	0/1:22,0:22:58.80:59,0,599	0/1:30,0:30:76.68:77,0,1006	0/1:30,0:30:99:103,0,791	0/1:46,1:47:67.72:68,0,455	0/1:50,0:50:19.81:20,0,315	1/1:32,0:31:0.47:222,0,0	0/1:22,0:22:35.76:36,0,1261	0/1:25,0:24:99:110,0,309	0/0:19,0:18:20.96:0,21,230	0/1:66,0:65:99:235,0,690	0/0:29,0:29:35.49:0,35,326	0/0:26,0:25:2.78:0,3,698	0/1:50,0:50:99:118,0,735	0/1:29,0:29:21.53:22,0,197	0/1:34,0:34:99:184,0,1051	0/0:29,0:29:30.45:0,30,893	0/0:12,0:12:17.93:0,18,287
chr10	5908855	.	CACACACACAT	C	3640.18	PASS	AB=1.000;AC=25;AF=0.446;AN=56;BaseQRankSum=-3.329;DP=919;FS=3.322;HRun=0;HaplotypeScore=282.5627;InbreedingCoeff=-0.4379;MQ=53.73;MQ0=12;MQRankSum=1.197;QD=4.75;ReadPosRankSum=-2.025;VQSLOD=2.1133;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:55,0:54:24:483,24,0	0/1:9,0:9:12.72:13,0,201	0/0:43,0:22:65.99:0,66,658	0/0:34,0:15:28.83:0,29,326	0/1:25,0:25:99:170,0,506	0/0:21,0:21:4.18:0,4,78	0/1:39,0:39:38.73:61,0,39	0/1:33,0:33:99:399,0,228	0/1:38,0:37:57.78:74,0,58	0/1:42,0:41:99:176,0,1231	0/1:24,0:24:70.98:122,0,71	0/1:23,0:23:99:105,0,432	0/1:32,0:32:99:120,0,804	0/1:29,0:29:99:108,0,600	0/1:47,0:47:99:134,0,176	0/1:49,0:49:48.98:171,0,49	1/1:4,27:30:17.99:464,18,0	0/1:22,0:22:77.34:77,0,997	0/1:25,0:24:77.34:196,0,77	0/0:17,0:16:4.27:0,4,66	0/1:68,0:67:99:288,0,434	0/1:30,0:30:17.12:17,0,52	0/0:25,0:24:2.89:0,3,514	0/1:50,0:50:99:120,0,538	1/1:31,1:32:5:111,5,0	0/1:34,0:34:99:223,0,628	0/1:29,0:29:6.91:7,0,430	0/0:13,0:13:12.59:0,13,124
chr10	5908857	.	CACACACAT	C	6179.96	PASS	AB=0.991;AC=33;AF=0.589;AN=56;BaseQRankSum=-5.656;DP=923;FS=1.607;HRun=0;HaplotypeScore=256.9395;InbreedingCoeff=-0.3073;MQ=53.36;MQ0=12;MQRankSum=0.102;QD=7.34;ReadPosRankSum=-1.050;VQSLOD=3.4977;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:54,0:53:12.53:348,0,13	0/1:8,0:8:12.75:13,0,126	0/0:46,0:25:71.97:0,72,704	0/0:35,0:17:34.96:0,35,345	0/1:25,0:25:99:170,0,339	1/1:22,0:22:7.60:99,8,0	1/1:36,2:38:14.04:311,14,0	0/1:36,0:36:31.46:495,0,31	0/1:35,2:36:0.98:342,0,1	0/1:40,0:39:99:188,0,801	0/1:26,0:26:20.35:188,0,20	0/1:25,0:25:99:156,0,271	0/1:34,0:34:99:162,0,531	0/1:29,0:29:99:173,0,435	0/1:44,3:47:36.78:426,0,37	1/1:40,5:45:18.98:560,19,0	1/1:30,0:29:17.99:296,18,0	0/1:22,0:22:98.72:99,0,651	1/1:25,1:25:26.82:481,27,0	0/1:17,0:16:2.12:98,0,2	0/1:70,0:69:99:391,0,223	1/1:28,1:29:8.07:252,8,0	0/1:24,0:23:0.01:0,0,346	0/1:50,0:50:99:189,0,361	1/1:32,0:32:32.86:316,33,0	0/1:32,1:33:99:296,0,193	0/1:29,1:30:74.15:115,0,74	0/1:13,0:13:4.98:19,0,5
chr10	5908859	.	CACACAT	C	9974.49	PASS	AB=1.000;AC=42;AF=0.750;AN=56;BaseQRankSum=-5.687;DP=922;FS=0.823;HRun=0;HaplotypeScore=227.7001;InbreedingCoeff=0.0281;MQ=54.56;MQ0=11;MQRankSum=-0.285;QD=11.85;ReadPosRankSum=-0.986;VQSLOD=3.7636;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:50,0:49:17.88:286,18,0	0/1:8,0:8:16.17:16,0,62	0/0:48,0:27:77.99:0,78,771	0/0:32,0:16:41.55:0,42,360	0/1:26,0:26:99:172,0,201	1/1:2,20:22:15.52:305,16,0	1/1:6,32:38:33.01:589,33,0	1/1:36,0:36:73.90:646,74,0	1/1:9,28:36:33.11:687,33,0	0/1:42,0:41:99:244,0,459	1/1:28,0:28:3.10:235,3,0	0/1:28,0:28:99:264,0,153	0/1:36,0:36:99:203,0,308	0/1:29,0:29:99:173,0,274	1/1:9,37:46:40.93:758,41,0	1/1:10,34:44:38.97:737,39,0	1/1:29,0:28:17.92:226,18,0	0/1:22,0:22:99:102,0,420	1/1:6,16:21:56.80:711,57,0	1/1:1,17:17:20.99:375,21,0	0/1:69,0:68:90.68:439,0,91	1/1:2,25:27:30.02:611,30,0	0/1:24,0:23:42.92:43,0,185	0/1:52,0:52:99:254,0,191	1/1:4,28:32:33.11:709,33,0	1/1:34,0:34:66.66:649,67,0	1/1:28,1:30:38.64:417,39,0	1/1:12,1:13:11.89:124,12,0
chr10	5908861	.	CACAT	C	8923.16	PASS	AB=1.000;AC=42;AF=0.750;AN=56;BaseQRankSum=-4.457;DP=915;FS=2.383;HRun=0;HaplotypeScore=212.7634;InbreedingCoeff=0.0197;MQ=55.81;MQ0=11;MQRankSum=-0.499;QD=10.67;ReadPosRankSum=1.541;VQSLOD=4.5697;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:50,0:49:29.78:271,30,0	0/1:8,0:8:13.17:55,0,13	0/0:47,0:27:80.91:0,81,792	0/0:32,0:16:44.61:0,45,380	0/1:25,0:25:94.68:175,0,95	0/1:22,0:22:5.07:121,0,5	1/1:37,0:37:32.41:296,32,0	1/1:4,31:35:66.48:804,66,0	1/1:35,0:34:16.28:341,16,0	0/1:42,0:41:99:342,0,180	1/1:28,0:28:11.96:244,12,0	0/1:28,0:28:67.14:266,0,67	0/1:39,0:39:99:288,0,137	0/1:26,0:27:99:173,0,136	1/1:45,1:46:0.06:414,0,0	1/1:43,0:43:39:411,39,0	1/1:29,0:28:16.79:157,17,0	0/1:22,0:22:99:114,0,213	1/1:20,1:20:54.05:521,54,0	1/1:18,0:17:20.86:190,21,0	1/1:70,0:69:24.05:549,24,0	1/1:27,0:27:6.77:273,7,0	0/1:26,0:25:57.91:95,0,58	0/1:50,0:50:62.52:277,0,63	1/1:32,0:32:33.05:363,33,0	1/1:4,30:34:72.63:1170,73,0	1/1:6,22:29:50.52:808,51,0	1/1:3,10:13:12.04:204,12,0
chr10	5909676	.	C	CAATAGTACGG	81471.05	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-0.110;DP=801;FS=0.544;HRun=0;HaplotypeScore=240.3750;InbreedingCoeff=0.9623;MQ=78.98;MQ0=0;MQRankSum=-11.634;QD=110.39;ReadPosRankSum=4.246;VQSLOD=5.1413;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:13,21:37:81.28:3989,81,0	1/1:2,7:10:27.05:1286,27,0	0/0:36,0:36:75.26:0,75,2261	0/0:27,0:27:71.88:0,72,1860	1/1:14,28:43:87.26:4025,87,0	1/1:6,16:22:60.21:3000,60,0	1/1:15,17:35:90.27:4158,90,0	1/1:25,16:42:99:5526,126,0	1/1:7,18:26:72.25:3735,72,0	1/1:16,4:22:63.09:2660,63,0	1/1:3,16:23:54.19:2774,54,0	1/1:6,21:28:75.26:3804,75,0	1/1:13,18:41:90.27:4341,90,0	1/1:13,12:28:72.16:2953,72,0	1/1:13,22:40:84.29:4160,84,0	1/1:10,16:28:75.17:3437,75,0	1/1:10,6:17:39.13:1815,39,0	1/1:1,4:7:15.05:783,15,0	1/1:13,15:32:90.30:3745,90,0	1/1:12,15:37:81.19:3411,81,0	1/1:12,14:37:57.20:2750,57,0	1/1:6,27:39:87.21:4293,87,0	1/1:7,19:28:60.40:3011,60,0	1/1:14,12:33:48.16:2110,48,0	1/1:5,18:25:57.20:2922,57,0	1/1:6,20:29:78.22:3693,78,0	1/1:12,12:26:63.21:2812,63,0	1/1:2,1:3:8.99:280,9,0
chr10	5912679	.	CA	C	301.06	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.018;DP=536;FS=2.628;HRun=4;HaplotypeScore=60.6678;InbreedingCoeff=0.9688;MQ=82.43;MQ0=3;MQRankSum=-2.198;QD=25.09;ReadPosRankSum=0.271;VQSLOD=2.4296;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,114,1577	0/0:12,0:12:36.12:0,36,504	0/0:27,0:25:67.09:0,67,850	0/0:26,0:25:56.53:0,57,672	0/0:16,0:16:45.15:0,45,628	0/0:21,0:21:57.19:0,57,790	0/0:14,0:13:33.06:0,33,418	0/0:28,0:28:75.25:0,75,1050	0/0:13,0:13:36.08:0,36,481	0/0:14,0:14:36.12:0,36,504	0/0:18,0:18:54.17:0,54,740	0/0:22,0:22:60.20:0,60,840	0/0:20,0:20:60.15:0,60,806	0/0:17,0:17:48.15:0,48,654	0/0:13,0:13:30.10:0,30,419	0/0:20,0:19:54.17:0,54,733	1/1:0,12:12:33.10:396,33,0	0/0:14,0:13:39.13:0,39,541	0/0:14,0:14:39.13:0,39,545	0/0:16,0:16:45.15:0,45,622	0/0:31,0:31:93.29:0,93,1280	0/0:17,0:16:48.16:0,48,671	0/0:14,0:14:42.14:0,42,588	0/0:29,0:29:84.26:0,84,1142	0/0:22,0:21:63.21:0,63,880	0/0:22,0:22:63.21:0,63,882	0/0:20,0:19:57.15:0,57,747	0/0:4,0:4:12.04:0,12,168
chr10	5912765	.	C	CA	993.36	PASS	AB=0.959;AC=17;AF=0.327;AN=52;BaseQRankSum=5.745;DP=584;FS=2.602;HRun=1;HaplotypeScore=135.1894;InbreedingCoeff=0.1790;MQ=35.11;MQ0=116;MQRankSum=-5.772;QD=3.44;ReadPosRankSum=-1.780;VQSLOD=-0.3739;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:33:35.55:0,36,408	0/1:6,0:3:18.86:19,0,24	./.	0/0:7,0:1:3.01:0,3,37	0/0:14,0:11:14.65:0,15,174	0/1:21,5:21:16.96:156,0,17	0/1:25,2:20:22.48:103,0,22	0/1:26,0:21:58.80:59,0,196	1/1:20,0:15:14.92:144,15,0	0/0:19,0:14:35.85:0,36,370	0/0:12,0:10:17.72:0,18,180	0/0:17,0:15:33.10:0,33,408	0/0:17,0:12:27.91:0,28,314	0/0:23,0:17:29.38:0,29,311	0/1:17,1:14:1.54:38,0,2	0/1:16,0:11:28.85:42,0,29	0/0:20,0:13:6.59:0,7,283	0/0:27,0:20:54.07:0,54,631	0/1:17,0:14:79.59:80,0,134	1/1:18,3:20:18.21:140,18,0	0/0:43,0:30:27.99:0,28,281	1/1:34,2:24:3.46:101,3,0	0/0:19,0:15:8.73:0,9,96	0/0:29,0:25:24.05:0,24,269	1/1:23,1:20:20.23:152,20,0	0/1:18,2:15:80.87:99,0,81	0/1:27,0:17:30.12:30,0,94	./.
chr10	5912766	.	AC	A	1148.05	PASS	AB=0.889;AC=17;AF=0.327;AN=52;BaseQRankSum=5.469;DP=585;FS=1.143;HRun=1;HaplotypeScore=131.3522;InbreedingCoeff=0.2020;MQ=35.11;MQ0=118;MQRankSum=-4.756;QD=3.96;ReadPosRankSum=-0.348;VQSLOD=0.0101;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:31:36.18:0,36,416	0/1:6,0:3:18.86:19,0,24	./.	0/0:7,0:1:3.01:0,3,37	0/0:14,0:11:15.65:0,16,175	0/1:22,3:21:8.52:157,0,9	0/1:25,4:20:14.26:124,0,14	0/1:25,1:21:48.36:48,0,182	1/1:17,4:15:16.22:158,16,0	0/0:19,0:14:35.64:0,36,361	0/0:12,0:10:17:0,17,144	0/0:17,0:15:33.11:0,33,427	0/0:17,0:12:26.37:0,26,322	0/0:24,0:18:21.37:0,21,240	0/1:15,3:14:4.96:61,0,5	0/1:14,2:11:29.14:64,0,29	0/0:20,0:13:6.68:0,7,279	0/0:26,0:19:49.14:0,49,561	0/1:14,2:13:34.58:35,0,142	1/1:16,4:19:19.02:175,19,0	0/0:43,0:30:23.90:0,24,265	1/1:23,5:24:12.11:142,12,0	0/0:19,0:15:8.09:0,8,94	0/0:30,0:26:26.51:0,27,272	1/1:18,5:20:20.02:186,20,0	0/1:17,0:17:99:112,0,183	0/1:24,3:17:40.40:40,0,134	./.
chr10	5912768	.	AC	A	934.83	PASS	AB=0.919;AC=16;AF=0.296;AN=54;BaseQRankSum=5.128;DP=595;FS=2.387;HRun=1;HaplotypeScore=129.9982;InbreedingCoeff=0.1239;MQ=35.03;MQ0=121;MQRankSum=-6.145;QD=2.96;ReadPosRankSum=1.375;VQSLOD=0.0922;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:34:38.88:0,39,411	0/0:5,0:2:2.94:0,3,18	0/0:4,0:1:2.98:0,3,22	0/1:9,0:1:0:0,0,0	0/0:13,1:11:17.81:0,18,226	0/1:18,8:21:10.80:151,0,11	0/1:28,4:23:26.01:144,0,26	0/1:25,0:20:81.57:82,0,142	0/1:20,0:14:1.71:73,0,2	0/0:19,0:14:38.70:0,39,399	0/0:12,0:10:17:0,17,144	0/0:17,0:15:33.11:0,33,427	0/0:17,0:12:26.37:0,26,322	0/0:24,0:18:23.46:0,23,262	0/1:19,1:15:34.86:35,0,41	0/1:13,4:12:19.88:51,0,20	0/0:20,1:13:14.25:0,14,232	0/0:26,0:19:49.12:0,49,559	0/1:13,4:14:99:136,0,165	1/1:21,1:19:17.75:89,18,0	0/1:42,0:28:16.68:17,0,221	1/1:34,2:24:5.22:119,5,0	0/0:19,0:15:8.10:0,8,94	0/0:29,0:25:26.52:0,27,270	1/1:18,5:19:16.15:132,16,0	0/0:24,0:18:1.96:0,2,312	0/1:26,1:17:65.37:65,0,166	./.
chr10	5912770	.	AC	A	549.90	PASS	AB=0.954;AC=10;AF=0.185;AN=54;BaseQRankSum=3.009;DP=600;FS=0.000;HRun=1;HaplotypeScore=130.0825;InbreedingCoeff=-0.1417;MQ=35.05;MQ0=123;MQRankSum=-6.251;QD=2.41;ReadPosRankSum=2.249;VQSLOD=-0.5124;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:34:31.74:0,32,371	0/0:5,0:2:1.55:0,2,4	0/0:4,0:1:3.01:0,3,38	0/1:10,0:1:0:0,0,0	0/0:14,0:11:17.81:0,18,228	0/1:27,0:21:41.72:42,0,93	0/0:31,0:23:16.37:0,16,200	0/1:16,9:20:99:322,0,125	0/1:19,1:13:19.08:19,0,63	0/0:19,0:14:38.70:0,39,406	0/0:12,0:10:17.39:0,17,151	0/0:17,0:15:33.11:0,33,427	0/0:17,0:12:26.37:0,26,322	0/0:24,0:18:23.48:0,23,276	0/0:21,0:16:25.40:0,25,202	0/1:16,0:12:47.23:47,0,52	0/1:20,1:13:34.86:35,0,136	0/0:26,0:19:46.12:0,46,523	0/0:17,0:14:12.73:0,13,235	0/0:22,0:19:16.74:0,17,99	0/0:43,0:29:15.31:0,15,236	0/1:33,0:22:9.45:9,0,73	0/0:19,0:15:8.13:0,8,94	0/0:33,0:29:31.29:0,31,313	0/1:23,0:19:46.14:48,0,46	0/1:24,0:18:53.57:54,0,342	0/1:23,3:17:99:108,0,176	./.
chr10	5912787	.	A	ACA	2851.13	PASS	AB=0.969;AC=32;AF=0.571;AN=56;BaseQRankSum=-1.298;DP=657;FS=7.061;HRun=0;HaplotypeScore=138.1703;InbreedingCoeff=0.1548;MQ=44.23;MQ0=120;MQRankSum=1.491;QD=5.68;ReadPosRankSum=1.322;VQSLOD=2.8425;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:36:12.96:0,13,297	1/1:6,0:3:6.02:91,6,0	0/0:12,0:4:7.89:0,8,79	0/0:24,0:11:3:0,3,88	0/1:19,0:16:71.25:259,0,71	0/0:26,0:20:2.82:0,3,14	0/1:33,0:24:0.45:0,0,0	0/1:33,0:30:27.59:28,0,221	1/1:23,0:16:2.78:14,3,0	0/1:21,0:16:41.30:255,0,41	1/1:17,0:15:26.68:255,27,0	0/1:21,0:19:30.96:357,0,31	1/1:21,0:16:19.36:324,19,0	1/1:23,0:18:25.59:310,26,0	1/1:25,0:19:0.47:1,0,0	1/1:20,0:13:2.87:35,3,0	1/1:21,0:12:4.46:20,4,0	0/1:22,0:16:7.61:262,0,8	0/0:20,0:16:2.99:0,3,23	0/1:21,0:16:0:0,0,0	1/1:46,0:31:22.37:459,22,0	1/1:28,0:20:3.87:40,4,0	0/1:11,9:17:18.70:27,0,19	0/1:30,0:27:89.35:265,0,89	1/1:23,0:19:0.46:1,0,0	0/1:29,0:22:6.09:6,0,274	0/0:24,0:18:11.53:0,12,128	0/0:8,0:4:12.03:0,12,137
chr10	5914201	.	G	GTTGTGTTGGA	2724.39	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.212;DP=703;FS=0.816;HRun=0;HaplotypeScore=210.3607;InbreedingCoeff=0.9881;MQ=94.46;MQ0=0;MQRankSum=-7.135;QD=108.98;ReadPosRankSum=-2.115;VQSLOD=3.5059;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,105,3408	0/0:7,0:7:21.07:0,21,691	0/0:31,0:31:87.29:0,87,2679	0/0:33,0:33:71.78:0,72,2427	0/0:28,0:28:78.27:0,78,2523	0/0:20,0:20:57.19:0,57,1806	0/0:24,0:24:72.25:0,72,2359	0/0:43,0:43:99:0,123,3833	0/0:24,0:24:69.24:0,69,2276	0/0:19,0:19:57.20:0,57,1807	0/0:24,0:24:69.23:0,69,2205	0/0:19,0:19:57.18:0,57,1806	0/0:38,0:38:99:0,111,3340	0/0:35,0:35:99:0,102,3324	0/0:19,0:19:57.18:0,57,1739	0/0:24,0:24:72.23:0,72,2261	1/1:16,8:25:63.22:2819,63,0	0/0:23,0:23:69.24:0,69,2196	0/0:27,0:27:78.22:0,78,2306	0/0:23,0:23:66.22:0,66,2105	0/0:23,0:23:69.24:0,69,2224	0/0:24,0:24:69.24:0,69,2122	0/0:30,0:30:87.30:0,87,2822	0/0:35,0:35:99:0,105,3313	0/0:15,0:15:45.15:0,45,1468	0/0:20,0:20:54.18:0,54,1702	0/0:27,0:27:81.28:0,81,2670	0/0:8,0:8:18.06:0,18,601
chr10	5914836	.	T	TG	14594.91	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=0.756;DP=675;FS=1.585;HRun=0;HaplotypeScore=77.1798;InbreedingCoeff=0.9996;MQ=85.82;MQ0=0;MQRankSum=-1.143;QD=44.77;ReadPosRankSum=0.989;VQSLOD=5.1284;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:59,0:59:99:0,178,2471	0/0:13,0:13:39.13:0,39,546	0/0:25,0:25:71.85:0,72,916	0/0:20,0:20:30.53:0,31,544	0/0:28,0:28:81.27:0,81,1133	1/1:0,14:14:36.12:576,36,0	1/1:0,30:30:84.29:1341,84,0	1/1:1,23:24:69.22:1080,69,0	1/1:0,38:38:99:1773,111,0	0/0:26,0:26:78.26:0,78,1091	0/0:17,0:17:51.17:0,51,713	0/0:22,0:22:66.22:0,66,923	0/0:21,0:21:60.20:0,60,838	0/0:29,0:29:84.26:0,84,1142	1/1:0,22:22:57.19:911,57,0	1/1:0,35:35:93.32:1487,93,0	1/1:0,22:22:66.23:1055,66,0	0/0:16,0:16:48.16:0,48,665	1/1:0,12:12:36.12:572,36,0	1/1:0,22:22:60.20:958,60,0	0/0:29,0:29:87.28:0,87,1199	1/1:0,15:15:39.13:623,39,0	0/0:21,0:21:60.20:0,60,835	0/0:23,0:23:69.23:0,69,965	1/1:0,23:23:63.21:1007,63,0	1/1:1,32:33:96.33:1533,96,0	1/1:0,28:28:81.28:1295,81,0	1/1:0,8:8:24.08:384,24,0
chr10	5915060	.	C	CTAG	2711.57	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-9.449;DP=771;FS=3.923;HRun=0;HaplotypeScore=114.8294;InbreedingCoeff=0.9970;MQ=89.07;MQ0=0;MQRankSum=-4.616;QD=45.96;ReadPosRankSum=2.787;VQSLOD=5.4649;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,57:59:99:2806,114,0	0/0:9,0:9:27.09:0,27,501	0/0:27,0:27:81.20:0,81,1341	0/0:32,0:32:95.22:0,95,1473	0/0:33,0:33:96.29:0,96,1696	0/0:18,0:18:51.16:0,51,918	0/0:28,0:28:81.25:0,81,1445	0/0:34,0:34:99:0,99,1803	0/0:34,0:34:99:0,99,1779	0/0:32,0:32:96.31:0,96,1730	0/0:15,0:15:45.15:0,45,837	0/0:22,0:22:63.19:0,63,1111	0/0:26,0:26:78.21:0,78,1330	0/0:35,0:35:96.31:0,96,1747	0/0:27,0:27:81.26:0,81,1477	0/0:23,0:23:66.20:0,66,1161	0/0:33,0:32:99:0,99,1746	0/0:35,0:35:99:0,102,1879	0/0:24,0:24:72.23:0,72,1282	0/0:22,0:22:60.17:0,60,1034	0/0:40,0:40:99:0,120,2195	0/0:25,0:25:75.26:0,75,1388	0/0:26,0:26:75.26:0,75,1390	0/0:30,0:30:87.28:0,87,1579	0/0:17,0:17:51.17:0,51,941	0/0:30,0:30:90.31:0,90,1671	0/0:26,0:26:75.22:0,75,1332	0/0:9,0:9:24.08:0,24,446
chr10	5915736	.	CT	C	617.68	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.911;DP=772;FS=4.596;HRun=1;HaplotypeScore=74.2635;InbreedingCoeff=0.9999;MQ=86.29;MQ0=0;MQRankSum=-2.262;QD=36.33;ReadPosRankSum=1.984;VQSLOD=4.1959;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,154,2439	0/0:13,0:13:39.12:0,39,593	0/0:31,0:31:69.90:0,70,1384	0/0:22,0:22:63.19:0,63,955	0/0:30,0:30:90.29:0,90,1413	0/0:21,0:21:63.21:0,63,1007	0/0:28,0:28:84.27:0,84,1311	0/0:33,0:33:96.30:0,96,1471	0/0:29,0:29:87.28:0,87,1357	0/0:31,0:31:93.32:0,93,1475	0/0:24,0:24:69.24:0,69,1101	0/0:28,0:28:81.24:0,81,1247	0/0:29,0:29:87.27:0,87,1344	0/0:31,0:31:93.32:0,93,1487	0/0:33,0:33:99:0,99,1582	0/0:28,0:28:84.27:0,84,1312	1/1:0,17:17:51.17:713,51,0	0/0:17,0:17:48.14:0,48,742	0/0:23,0:23:69.16:0,69,1040	0/0:25,0:25:72.25:0,72,1143	0/0:28,0:28:84.29:0,84,1339	0/0:31,0:31:93.30:0,93,1457	0/0:28,0:28:81.28:0,81,1275	0/0:22,0:22:66.23:0,66,1055	0/0:29,0:29:84.28:0,84,1307	0/0:35,0:35:99:0,105,1654	0/0:37,0:37:99:0,111,1704	0/0:16,0:16:48.16:0,48,767
chr10	5916035	.	G	GA	10410.64	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-18.957;DP=688;FS=4.351;HRun=6;HaplotypeScore=58.4300;InbreedingCoeff=0.9999;MQ=91.55;MQ0=0;MQRankSum=-2.440;QD=32.03;ReadPosRankSum=1.606;VQSLOD=5.4599;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:75.11:0,75,741	0/0:16,0:16:45.05:0,45,442	0/0:29,0:29:66.08:0,66,650	0/0:28,0:28:58.58:0,59,583	0/0:40,0:40:99:0,111,1131	1/1:4,30:34:87.02:1094,87,0	1/1:2,15:17:45.14:566,45,0	1/1:6,23:29:69.17:816,69,0	1/1:2,26:28:75.24:944,75,0	0/0:30,0:30:84.19:0,84,857	0/0:19,0:19:54.12:0,54,551	0/0:23,0:23:63.14:0,63,642	0/0:29,0:29:78.11:0,78,767	0/0:24,0:24:60.13:0,60,612	1/1:2,17:19:48.15:604,48,0	1/1:3,33:36:84.27:1057,84,0	0/0:20,0:20:51.09:0,51,513	0/0:13,0:13:33.07:0,33,337	1/1:4,10:14:33.06:397,33,0	1/1:3,30:33:84.27:1057,84,0	0/0:24,0:24:69.13:0,69,696	1/1:4,24:28:75.24:938,75,0	0/0:22,0:22:60.13:0,60,612	0/0:18,0:18:51.11:0,51,520	1/1:2,22:24:57.18:717,57,0	1/1:1,24:25:44.62:863,45,0	1/1:0,22:22:63.20:793,63,0	1/1:0,16:16:45.14:566,45,0
chr10	5916135	.	A	AGTGT	1155.39	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-3.229;DP=736;FS=6.732;HRun=0;HaplotypeScore=131.5938;InbreedingCoeff=0.9621;MQ=76.66;MQ0=0;MQRankSum=-0.841;QD=30.41;ReadPosRankSum=0.191;VQSLOD=2.9098;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,26:38:30.97:1250,31,0	0/0:9,0:9:24.07:0,24,382	0/0:52,0:44:42.85:0,43,1066	0/0:41,0:40:20.34:0,20,1107	0/0:31,0:31:28.66:0,29,1175	0/0:22,0:22:57.19:0,57,956	0/0:22,0:22:60.20:0,60,1007	0/0:34,0:34:63.19:0,63,944	0/0:22,0:22:48.15:0,48,766	0/0:22,0:23:60.19:0,60,928	0/0:33,0:33:84.27:0,84,1386	0/0:24,0:24:54.18:0,54,905	0/0:25,0:25:57.19:0,57,953	0/0:26,0:26:57.16:0,57,877	0/0:29,0:29:72.23:0,72,1173	0/0:26,0:28:69.23:0,69,1148	0/0:31,0:31:78.27:0,78,1324	0/0:17,0:17:36.43:0,36,706	0/0:13,0:13:36.12:0,36,585	0/0:18,0:19:48.14:0,48,759	0/0:33,0:33:56.52:0,57,1163	0/0:27,0:27:66.22:0,66,1109	0/0:37,0:37:86.65:0,87,1408	0/0:17,0:17:45.15:0,45,764	0/0:30,0:30:29.71:0,30,1104	0/0:20,0:20:42.13:0,42,667	0/0:27,0:27:66.22:0,66,1096	0/0:6,0:6:12.04:0,12,204
chr10	5917340	.	A	AT	2385.57	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=4.087;DP=583;FS=2.052;HRun=8;HaplotypeScore=82.7405;InbreedingCoeff=0.9799;MQ=71.67;MQ0=0;MQRankSum=-0.140;QD=25.38;ReadPosRankSum=-1.398;VQSLOD=3.7708;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:90.01:0,90,814	0/0:6,0:6:18.01:0,18,164	0/0:13,0:13:26.01:0,26,215	0/0:13,0:13:26.32:0,26,214	0/0:25,0:25:60.01:0,60,546	0/0:21,0:21:54.03:0,54,494	0/0:24,0:24:69:0,69,618	1/1:7,23:31:72:778,72,0	0/0:18,0:18:50.99:0,51,454	0/0:32,0:32:93.01:0,93,842	0/0:19,0:19:48.02:0,48,439	0/0:21,0:21:60.01:0,60,541	0/0:24,0:24:66.03:0,66,601	0/0:17,0:17:45.02:0,45,412	0/0:19,0:19:57.02:0,57,517	0/0:16,0:16:45.01:0,45,408	0/0:30,0:30:87.03:0,87,790	0/0:23,0:23:57.03:0,57,522	0/0:24,0:24:59.75:0,60,529	0/0:23,0:23:69.02:0,69,627	0/0:6,0:6:17.98:0,18,156	0/0:18,0:18:54:0,54,485	0/0:25,0:25:72.02:0,72,654	0/0:13,0:13:32.98:0,33,290	0/0:26,0:26:72.02:0,72,654	1/1:6,19:25:11.22:609,11,0	1/1:3,30:33:87.19:981,87,0	1/1:0,5:5:15.04:173,15,0
chr10	5918069	.	G	GA	107.79	PASS	AB=0.969;AC=12;AF=0.214;AN=56;BaseQRankSum=2.977;DP=387;FS=50.022;HRun=0;HaplotypeScore=78.8787;InbreedingCoeff=-0.1646;MQ=49.18;MQ0=35;MQRankSum=0.087;QD=0.86;ReadPosRankSum=-2.291;VQSLOD=-0.5444;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:22:1.73:0,2,69	0/1:8,0:8:16.41:16,0,72	0/0:13,0:3:5.96:0,6,49	0/0:23,0:6:13.59:0,14,158	0/1:13,0:11:34.87:35,0,94	0/0:6,0:5:1.16:0,1,17	0/0:16,0:13:13.44:0,13,123	0/0:19,0:14:9.02:0,9,187	0/1:14,0:11:10.84:11,0,76	0/1:20,0:19:13.37:13,0,378	0/0:9,0:9:1.01:0,1,188	0/0:23,0:20:32.50:0,33,289	0/0:21,0:20:24.89:0,25,288	0/1:10,2:12:12.66:13,0,246	0/1:3,0:2:18.28:19,0,18	0/0:9,0:7:15.76:0,16,107	0/1:21,0:20:16.59:114,0,17	0/0:17,0:15:17.52:0,18,288	0/1:10,0:9:2.59:3,0,122	1/1:2,0:2:0.47:1,0,0	0/0:14,0:14:12.03:0,12,167	0/0:15,0:10:12.73:0,13,83	0/0:10,0:9:14.51:0,15,188	0/0:25,0:23:40.32:0,40,395	0/0:8,0:7:6.89:0,7,48	0/0:9,0:8:14.29:0,14,141	0/1:8,1:9:3.39:3,0,56	0/1:13,1:4:6.62:8,0,7
chr10	5918071	.	G	GGAGA	2615.76	PASS	AB=0.914;AC=44;AF=0.880;AN=50;BaseQRankSum=1.044;DP=405;FS=2.472;HRun=0;HaplotypeScore=93.2760;InbreedingCoeff=-0.0290;MQ=48.11;MQ0=36;MQRankSum=0.114;QD=7.19;ReadPosRankSum=0.362;VQSLOD=2.1363;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:20,1:21:16.90:166,17,0	1/1:7,0:8:6.02:89,6,0	./.	./.	1/1:13,1:12:14.51:202,15,0	1/1:8,0:7:5.96:44,6,0	1/1:14,0:11:1.55:4,2,0	1/1:21,0:16:12.47:147,12,0	1/1:14,0:11:2.75:49,3,0	1/1:22,0:22:22.57:278,23,0	0/1:7,2:9:37.42:98,0,37	0/1:12,9:21:5.12:273,0,5	1/1:20,0:19:5.75:57,6,0	0/1:14,0:14:26.20:56,0,26	1/1:5,0:4:3.01:50,3,0	0/1:10,0:8:0:0,0,0	0/1:22,0:21:18.66:269,0,19	1/1:10,6:17:15.01:256,15,0	1/1:11,0:10:3.01:55,3,0	./.	1/1:14,0:14:3:26,3,0	1/1:19,0:14:3:25,3,0	1/1:10,0:9:3.48:53,3,0	1/1:13,10:21:14.79:292,15,0	0/1:7,0:6:0.02:0,0,0	1/1:10,0:9:8.72:73,9,0	1/1:9,0:9:9.42:105,9,0	1/1:13,0:3:3.01:54,3,0
chr10	5918087	.	A	AGAGA	2330.71	PASS	AB=1.000;AC=45;AF=0.865;AN=52;BaseQRankSum=-0.068;DP=433;FS=2.446;HRun=0;HaplotypeScore=81.9308;InbreedingCoeff=0.0134;MQ=46.68;MQ0=37;MQRankSum=-0.296;QD=5.60;ReadPosRankSum=1.231;VQSLOD=1.8415;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:22:16.90:166,17,0	1/1:8,0:8:3.01:55,3,0	0/1:21,0:6:0:0,0,0	0/1:37,0:10:0.04:0,0,0	1/1:20,0:18:14.77:202,15,0	1/1:8,0:7:0.89:2,1,0	1/1:9,0:6:1.55:4,2,0	1/1:18,0:13:4.78:26,5,0	1/1:7,0:4:2.75:49,3,0	1/1:23,0:22:20.74:274,21,0	0/1:10,0:10:37.42:98,0,37	0/1:26,0:23:5.12:273,0,5	1/1:11,6:17:5.75:57,6,0	0/1:14,0:14:26.20:56,0,26	1/1:9,0:9:2.82:49,3,0	./.	0/1:26,0:25:18.66:269,0,19	1/1:20,0:19:13.86:239,14,0	1/1:9,0:8:3.48:57,3,0	./.	1/1:14,0:14:3:26,3,0	1/1:21,0:18:3:25,3,0	1/1:10,0:9:3.48:53,3,0	1/1:22,0:19:14.79:292,15,0	0/1:8,0:7:0:0,0,0	1/1:12,0:11:7.53:38,8,0	1/1:9,0:9:5.30:70,5,0	1/1:13,0:2:3.01:54,3,0
chr10	5918952	.	AAC	A	5340.29	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-2.317;DP=718;FS=2.921;HRun=0;HaplotypeScore=150.2928;InbreedingCoeff=0.8084;MQ=60.84;MQ0=9;MQRankSum=8.744;QD=18.87;ReadPosRankSum=8.779;VQSLOD=4.2178;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:43:53.59:0,54,431	1/1:1,8:9:21.06:243,21,0	0/0:38,0:20:21.03:0,21,271	0/0:37,0:28:22.31:0,22,265	1/1:5,20:25:51.15:589,51,0	0/0:28,0:28:3.01:0,3,43	0/0:23,0:22:2.93:0,3,26	0/0:37,0:31:55.31:0,55,647	0/0:22,0:22:8.98:0,9,72	1/1:5,18:24:27.09:534,27,0	1/1:8,9:16:21.06:243,21,0	1/1:8,17:24:45.13:520,45,0	1/1:15,14:30:44.55:499,45,0	1/1:6,17:24:47.97:534,48,0	0/0:25,0:25:6.15:0,6,60	0/0:21,0:20:9.02:0,9,101	0/0:35,0:35:5.30:0,5,62	1/1:10,15:26:47.97:534,48,0	0/0:13,0:15:16.65:0,17,131	0/0:9,0:12:6.01:0,6,69	1/1:23,22:47:34.10:612,34,0	0/0:17,0:17:3:0,3,25	1/1:8,10:18:27.08:312,27,0	1/1:13,23:38:65.86:721,66,0	0/0:23,0:22:2.99:0,3,23	0/0:9,1:25:4.35:0,4,375	0/0:11,0:25:16.24:0,16,163	0/0:4,0:4:8.99:0,9,95
chr10	5919096	.	C	CA	12931.44	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-10.059;DP=646;FS=5.970;HRun=2;HaplotypeScore=62.3332;InbreedingCoeff=0.9988;MQ=84.12;MQ0=0;MQRankSum=-5.251;QD=38.83;ReadPosRankSum=-0.603;VQSLOD=5.0865;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,37:37:99:1468,102,0	0/0:7,0:7:21.04:0,21,245	0/0:22,0:22:54.58:0,55,619	0/0:19,0:19:47.50:0,47,601	0/0:28,0:28:78.23:0,78,954	1/1:2,21:23:63.21:907,63,0	1/1:0,20:20:51.17:734,51,0	1/1:2,37:38:99:1506,105,0	1/1:1,14:15:42.14:604,42,0	0/0:33,0:33:90.28:0,90,1116	0/0:21,0:21:63.20:0,63,780	0/0:19,0:19:57.18:0,57,707	0/0:35,0:35:99:0,102,1233	0/0:21,0:21:60.18:0,60,730	1/1:0,13:13:33.08:453,33,0	1/1:0,18:18:51.17:734,51,0	1/1:1,32:33:90.30:1296,90,0	0/0:26,0:26:78.25:0,78,966	1/1:3,20:23:57.19:819,57,0	1/1:0,15:15:42.14:605,42,0	0/0:40,0:40:99:0,120,1488	1/1:3,15:18:48.16:679,48,0	0/0:19,0:19:54.17:0,54,669	0/0:23,0:23:69.22:0,69,855	1/1:0,18:18:54.18:775,54,0	1/1:2,28:30:84.28:1207,84,0	1/1:1,21:22:60.17:841,60,0	1/1:0,9:9:21.07:302,21,0
chr10	5919323	.	TC	T	1163.57	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=1.748;DP=543;FS=23.450;HRun=1;HaplotypeScore=85.4273;InbreedingCoeff=0.9901;MQ=79.52;MQ0=0;MQRankSum=-2.900;QD=37.53;ReadPosRankSum=1.502;VQSLOD=1.8050;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:99:0,99,1576	0/0:10,0:10:30.10:0,30,479	0/0:16,0:16:28.81:0,29,468	0/0:20,0:20:46.39:0,46,622	0/0:22,0:22:66.21:0,66,1016	0/0:22,0:22:63.21:0,63,1003	0/0:26,0:26:78.21:0,78,1192	0/0:35,0:35:99:0,102,1557	0/0:22,0:22:66.23:0,66,1053	0/0:20,0:20:60.20:0,60,960	0/0:18,0:18:54.16:0,54,820	0/0:28,0:28:81.24:0,81,1226	0/0:21,0:21:63.21:0,63,1004	0/0:14,0:14:42.11:0,42,623	0/0:19,0:19:57.18:0,57,886	0/0:21,0:21:63.21:0,63,1003	1/1:0,31:31:90.30:1258,90,0	0/0:10,0:10:30.10:0,30,475	0/0:17,0:17:51.17:0,51,795	0/0:14,0:14:42.13:0,42,647	0/0:20,0:20:60.17:0,60,899	0/0:16,0:16:48.16:0,48,763	0/0:17,0:17:51.17:0,51,797	0/0:19,0:19:57.18:0,57,879	0/0:11,0:11:33.11:0,33,523	0/0:18,0:18:54.18:0,54,862	0/0:17,0:17:51.17:0,51,814	0/0:6,0:6:18.06:0,18,283
chr10	5920371	.	CTTTG	C	14978.88	PASS	AB=0.510;AC=25;AF=0.446;AN=56;BaseQRankSum=16.390;DP=683;FS=0.000;HRun=0;HaplotypeScore=118.0714;InbreedingCoeff=0.9594;MQ=80.60;MQ0=1;MQRankSum=-5.858;QD=46.37;ReadPosRankSum=-0.134;VQSLOD=4.8653;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:93.31:0,93,2401	0/0:16,0:16:45.15:0,45,1134	0/0:22,0:22:51.15:0,51,1172	0/0:16,0:16:39.12:0,39,864	0/0:23,0:23:60.19:0,60,1525	1/1:1,26:27:78.27:1435,78,0	1/1:3,24:27:66.23:1197,66,0	1/1:3,31:34:90.29:1606,90,0	1/1:0,24:23:60.20:1069,60,0	0/0:22,0:22:63.21:0,63,1591	0/0:19,0:19:57.20:0,57,1505	0/0:25,0:25:69.23:0,69,1764	0/0:22,0:22:66.23:0,66,1721	0/0:25,0:25:63.22:0,63,1661	1/1:5,19:24:48.16:883,48,0	1/1:5,24:29:69.24:1264,69,0	0/0:27,0:27:81.28:0,81,2109	0/0:25,0:25:72.25:0,72,1882	1/1:3,10:13:30.07:493,30,0	1/1:2,25:27:75.26:1363,75,0	0/0:36,0:36:99:0,99,2610	1/1:1,31:32:87.30:1600,87,0	0/0:29,0:29:87.28:0,87,2222	0/0:21,0:21:63.22:0,63,1625	1/1:1,22:23:63.22:1142,63,0	0/1:1,25:26:1.02:1271,0,1	1/1:4,25:29:66.23:1214,66,0	1/1:0,8:8:24.08:441,24,0
chr10	5921023	.	C	CCTGT	1166.20	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-6.430;DP=771;FS=0.000;HRun=0;HaplotypeScore=122.9360;InbreedingCoeff=0.9918;MQ=75.01;MQ0=0;MQRankSum=-1.072;QD=41.65;ReadPosRankSum=0.114;VQSLOD=3.9386;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,144,2329	0/0:9,0:9:18.06:0,18,301	0/0:28,0:28:40.31:0,40,717	0/0:37,0:35:72.24:0,72,1175	0/0:30,0:30:75.24:0,75,1222	0/0:32,0:32:78.25:0,78,1278	0/0:25,0:25:57.18:0,57,925	0/0:39,0:39:69.24:0,69,1150	0/0:25,0:25:60.19:0,60,967	0/0:26,0:26:60.20:0,60,981	0/0:20,0:20:51.16:0,51,825	0/0:29,0:29:66.21:0,66,1075	0/0:35,0:35:93.32:0,93,1551	0/0:21,0:21:51.17:0,51,853	0/0:34,0:34:69.24:0,69,1151	0/0:19,0:19:48.16:0,48,803	1/1:7,19:28:51.17:1261,51,0	0/0:15,0:15:45.14:0,45,726	0/0:26,0:26:54.18:0,54,900	0/0:22,0:22:54.18:0,54,897	0/0:30,0:30:63.20:0,63,1023	0/0:16,0:16:36.12:0,36,600	0/0:23,0:23:57.19:0,57,951	0/0:38,0:39:96.33:0,96,1599	0/0:24,0:24:57.18:0,57,926	0/0:33,0:33:90.29:0,90,1476	0/0:37,0:37:96.33:0,96,1605	0/0:15,0:15:42.14:0,42,702
chr10	5921547	.	A	AGT	1153.74	PASS	AB=0.988;AC=15;AF=0.288;AN=52;BaseQRankSum=1.002;DP=707;FS=2.927;HRun=0;HaplotypeScore=111.2894;InbreedingCoeff=0.5539;MQ=66.57;MQ0=6;MQRankSum=-1.202;QD=5.60;ReadPosRankSum=-1.067;VQSLOD=3.0935;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:20.51:0,21,221	1/1:5,5:11:12.04:180,12,0	./.	./.	0/1:26,0:26:11.41:11,0,288	0/0:22,0:23:1.63:0,2,198	0/1:20,1:26:31.68:32,0,284	0/0:24,0:24:2.28:0,2,32	0/0:15,0:16:23.89:0,24,245	0/0:26,0:27:5.12:0,5,46	0/0:23,0:23:12.03:0,12,131	0/0:22,0:22:17.87:0,18,179	0/0:23,0:25:38.89:0,39,396	0/0:43,0:45:31.44:0,31,489	0/0:31,0:33:47.45:0,47,451	0/0:32,0:32:42.11:0,42,461	1/1:15,2:26:27.63:221,28,0	0/0:25,0:26:6.69:0,7,375	0/0:20,0:20:12.03:0,12,132	0/0:20,0:20:21.05:0,21,231	0/0:41,0:40:17.73:0,18,161	1/1:15,1:26:5.83:52,6,0	0/0:12,0:13:5.84:0,6,47	0/1:21,0:22:3.05:3,0,353	0/0:22,0:22:21.05:0,21,231	1/1:32,0:31:18.04:225,18,0	1/1:8,17:27:6.18:506,6,0	1/1:7,3:10:6.02:90,6,0
chr10	5922132	.	A	AT	4618.55	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=7.979;DP=356;FS=1.753;HRun=8;HaplotypeScore=47.4893;InbreedingCoeff=0.8910;MQ=72.89;MQ0=0;MQRankSum=-4.877;QD=25.95;ReadPosRankSum=0.361;VQSLOD=5.4011;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:21.01:0,21,192	0/0:6,0:6:18.01:0,18,165	0/0:13,0:13:24.48:0,24,218	0/1:10,0:8:23.24:23,0,42	0/0:15,0:15:41.99:0,42,376	1/1:0,9:9:21.06:242,21,0	1/1:0,6:6:15.04:172,15,0	1/1:4,22:26:63.16:708,63,0	1/1:2,11:13:33.09:375,33,0	0/0:20,0:20:57.03:0,57,522	0/0:13,0:13:36:0,36,324	0/0:16,0:16:48:0,48,430	0/0:17,0:17:45.02:0,45,412	0/0:13,0:13:35.99:0,36,322	1/1:1,12:13:33.10:381,33,0	1/1:0,6:6:12.04:138,12,0	1/1:3,13:15:36.09:400,36,0	0/0:14,0:15:41.06:0,41,363	1/1:3,4:7:12.04:138,12,0	1/1:1,12:13:36.11:415,36,0	0/0:12,0:12:36.02:0,36,329	1/1:3,10:13:30.09:346,30,0	0/0:14,0:14:30.01:0,30,274	0/0:12,0:12:27.01:0,27,247	1/1:0,2:2:3.01:35,3,0	1/1:0,17:17:45.13:519,45,0	1/1:3,14:18:42.12:484,42,0	1/1:2,7:9:21.06:242,21,0
chr10	5922186	.	CTT	C	656.90	PASS	AC=4;AF=0.080;AN=50;BaseQRankSum=3.716;DP=221;FS=9.715;HRun=12;HaplotypeScore=29.6209;InbreedingCoeff=0.4401;MQ=54.30;MQ0=30;MQRankSum=-2.167;QD=16.02;ReadPosRankSum=2.111;VQSLOD=0.6041;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,9:10:15.03:153,15,0	0/0:4,0:4:9.03:0,9,134	0/0:4,0:3:6:0,6,59	0/0:4,0:2:3.01:0,3,33	0/0:17,0:17:45.14:0,45,633	0/0:4,0:2:5.68:0,6,28	./.	./.	0/0:1,0:1:2.84:0,3,14	0/0:16,0:16:36.09:0,36,515	0/0:14,0:14:29.89:0,30,412	0/0:13,0:12:24.08:0,24,356	0/0:8,0:7:15.05:0,15,219	0/0:10,0:9:23.67:0,24,324	0/0:3,0:3:5.72:0,6,29	0/0:6,0:1:2.88:0,3,15	1/1:7,21:26:62.61:617,63,0	0/0:15,0:13:21.07:0,21,313	0/0:2,0:1:2.90:0,3,16	./.	0/0:12,0:9:21.07:0,21,313	0/0:2,0:1:2.80:0,3,13	0/0:11,0:10:25.81:0,26,296	0/0:11,0:13:32.58:0,33,420	0/0:2,0:1:2.80:0,3,13	0/0:3,0:1:2.88:0,3,15	0/0:3,0:1:2.80:0,3,13	0/0:4,0:1:2.84:0,3,14
chr10	5922195	.	T	TCCATC	1641.68	PASS	AB=0.941;AC=23;AF=0.442;AN=52;BaseQRankSum=2.296;DP=251;FS=20.786;HRun=0;HaplotypeScore=38.4516;InbreedingCoeff=0.6636;MQ=49.21;MQ0=52;MQRankSum=-6.411;QD=23.45;ReadPosRankSum=-3.597;VQSLOD=0.9637;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:10:15.05:0,15,223	0/0:3,0:3:9.03:0,9,210	0/0:3,0:2:6.01:0,6,74	0/0:3,0:1:3.01:0,3,43	0/0:20,0:16:48.16:0,48,1079	1/1:3,2:3:9.03:262,9,0	./.	1/1:6,0:5:15.01:338,15,0	1/1:1,1:1:3.01:91,3,0	0/0:16,0:16:42.14:0,42,945	0/0:13,0:12:33.11:0,33,747	0/0:10,0:9:24.08:0,24,558	0/0:8,0:7:21.05:0,21,440	0/0:11,0:8:24.08:0,24,539	1/1:2,3:5:6.01:182,6,0	1/1:5,2:1:3.01:91,3,0	0/0:31,0:26:66.22:0,66,1007	0/0:15,0:13:27.06:0,27,576	1/1:2,1:2:5.98:111,6,0	./.	0/0:13,0:9:21.07:0,21,489	1/1:4,1:1:3.01:90,3,0	0/0:14,0:10:30.02:0,30,618	0/1:15,1:14:42.77:43,0,669	1/1:5,1:2:6.02:173,6,0	1/1:5,1:3:9.03:260,9,0	1/1:3,1:1:3.01:91,3,0	1/1:4,1:1:3.01:91,3,0
chr10	5922821	.	GT	G	1405.83	PASS	AB=1.000;AC=10;AF=0.179;AN=56;BaseQRankSum=1.156;DP=571;FS=17.187;HRun=11;HaplotypeScore=102.7267;InbreedingCoeff=0.6792;MQ=72.27;MQ0=0;MQRankSum=-3.767;QD=10.98;ReadPosRankSum=-2.386;VQSLOD=0.9067;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:40:88.68:0,89,447	0/0:9,0:10:26.90:0,27,270	0/0:17,0:17:1.31:0,1,127	0/1:13,0:13:9.65:10,0,83	0/0:25,1:26:66.10:0,66,677	0/0:18,0:18:40.65:0,41,232	0/0:14,0:14:6.55:0,7,162	1/1:7,21:29:32.83:448,33,0	0/1:16,0:16:7.83:8,0,171	0/0:28,1:29:41.43:0,41,616	0/0:15,0:17:36.04:0,36,361	0/0:20,0:21:53.95:0,54,549	0/0:19,0:20:54:0,54,556	0/0:29,0:29:78.17:0,78,811	0/0:22,0:22:55.61:0,56,350	0/0:19,0:19:49.82:0,50,315	0/0:5,0:17:28.41:0,28,142	0/0:10,0:9:24.06:0,24,256	0/0:18,0:18:35.78:0,36,235	0/0:21,0:21:28.19:0,28,282	0/0:16,1:17:14.46:0,14,359	0/0:20,1:21:47.05:0,47,328	0/0:17,0:17:42.07:0,42,436	0/0:21,0:21:48.12:0,48,512	0/0:18,1:19:22.19:0,22,252	1/1:6,24:30:4.93:453,5,0	1/1:6,24:30:58.95:473,59,0	1/1:2,7:9:20.97:172,21,0
chr10	5923586	.	AT	A	542.89	PASS	AB=0.909;AC=3;AF=0.054;AN=56;BaseQRankSum=6.528;DP=691;FS=1.656;HRun=8;HaplotypeScore=63.4346;InbreedingCoeff=0.7469;MQ=80.16;MQ0=0;MQRankSum=-3.045;QD=13.92;ReadPosRankSum=2.252;VQSLOD=3.5026;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:60.13:0,60,697	0/0:8,0:8:24.07:0,24,290	0/0:18,0:18:48.01:0,48,536	0/0:17,0:16:18.79:0,19,395	0/0:39,0:39:99:0,111,1327	0/0:28,0:28:75.22:0,75,894	0/1:9,1:10:1.89:2,0,263	0/0:26,1:27:66.18:0,66,778	0/0:22,0:22:63.19:0,63,761	0/0:40,0:40:99:0,117,1403	0/0:21,0:21:54.14:0,54,631	0/0:24,0:24:60.16:0,60,705	0/0:31,0:31:87.24:0,87,1028	0/0:32,0:32:90.22:0,90,1030	0/0:19,0:19:54.17:0,54,652	0/0:29,0:29:87.23:0,87,1017	1/1:5,24:29:66.10:637,66,0	0/0:18,0:18:54.12:0,54,636	0/0:28,0:28:81.25:0,81,978	0/0:44,0:44:99:0,126,1499	0/0:8,0:8:24.07:0,24,290	0/0:34,0:34:96.28:0,96,1146	0/0:27,0:27:78.24:0,78,942	0/0:22,0:22:60.18:0,60,724	0/0:21,0:21:60.18:0,60,725	0/0:39,0:39:99:0,105,1268	0/0:27,0:27:66.19:0,66,786	0/0:7,0:7:21.06:0,21,254
chr10	5923721	.	AC	A	7997.50	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=17.763;DP=740;FS=4.433;HRun=2;HaplotypeScore=83.6409;InbreedingCoeff=0.9985;MQ=86.62;MQ0=0;MQRankSum=-2.576;QD=36.02;ReadPosRankSum=4.441;VQSLOD=5.3922;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:96.27:0,96,1373	0/0:6,0:6:18.06:0,18,269	0/0:26,0:26:69.23:0,69,998	0/0:33,0:33:90.22:0,90,1265	0/0:27,0:27:75.21:0,75,1063	1/1:0,24:24:69.22:896,69,0	1/1:0,23:23:63.20:818,63,0	0/0:37,0:37:99:0,108,1598	1/1:0,23:23:63.20:816,63,0	0/0:41,0:41:99:0,117,1752	0/0:16,0:16:48.10:0,48,636	0/0:32,0:32:96.30:0,96,1398	0/0:35,0:35:99:0,105,1489	0/0:30,0:30:87.29:0,87,1303	1/1:0,27:27:78.25:1013,78,0	1/1:0,26:26:72.23:935,72,0	0/0:21,0:21:63.21:0,63,943	0/0:9,0:9:27.09:0,27,404	1/1:1,23:24:69.18:853,69,0	1/1:2,22:24:63.20:818,63,0	0/0:43,0:43:99:0,129,1869	1/1:0,31:31:90.25:1149,90,0	0/0:27,0:27:81.27:0,81,1205	0/0:26,0:26:78.24:0,78,1145	1/1:0,20:20:54.18:701,54,0	0/0:29,0:29:87.29:0,87,1286	0/0:36,0:36:99:0,108,1592	0/0:11,0:11:30.06:0,30,421
chr10	5924117	.	TG	T	11873.48	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=13.468;DP=610;FS=15.165;HRun=1;HaplotypeScore=59.3379;InbreedingCoeff=0.9965;MQ=85.09;MQ0=0;MQRankSum=-7.201;QD=37.57;ReadPosRankSum=2.519;VQSLOD=3.7552;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,20:20:57.19:796,57,0	0/0:8,0:8:24.08:0,24,383	0/0:25,0:25:70.28:0,70,901	0/0:17,0:17:38.51:0,39,692	0/0:25,0:25:75.24:0,75,1162	1/1:0,23:23:66.22:923,66,0	1/1:0,12:12:36.08:481,36,0	1/1:0,33:33:99:1354,99,0	1/1:0,16:16:42.14:587,42,0	0/0:35,0:35:99:0,102,1566	0/0:21,0:21:63.21:0,63,999	0/0:23,0:23:69.20:0,69,1049	0/0:29,0:29:81.16:0,81,1213	0/0:23,0:23:69.22:0,69,1075	1/1:0,24:24:63.21:880,63,0	1/1:0,21:21:54.18:755,54,0	1/1:0,15:15:42.14:587,42,0	0/0:23,0:23:69.18:0,69,1024	1/1:0,21:21:60.19:820,60,0	1/1:0,18:18:51.17:712,51,0	0/0:24,0:24:72.22:0,72,1100	1/1:0,23:23:66.17:896,66,0	0/0:27,1:28:42.34:0,42,1226	0/0:13,0:13:39.12:0,39,591	1/1:0,25:25:63.21:881,63,0	1/1:1,20:21:15.23:775,15,0	1/1:0,34:34:84.28:1174,84,0	1/1:0,10:10:18.06:252,18,0
chr10	5924406	.	CT	C	8194.14	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=14.298;DP=504;FS=1.951;HRun=5;HaplotypeScore=77.6156;InbreedingCoeff=0.9991;MQ=82.61;MQ0=0;MQRankSum=-0.748;QD=30.24;ReadPosRankSum=2.500;VQSLOD=5.5336;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:72.24:0,72,985	0/0:14,0:14:39.13:0,39,533	0/0:14,0:14:32.99:0,33,383	0/0:15,0:15:37.60:0,38,427	0/0:16,0:16:39.13:0,39,534	1/1:2,23:25:69.20:783,69,0	1/1:0,12:12:36.10:408,36,0	1/1:3,23:26:66.17:738,66,0	1/1:0,13:13:39.11:442,39,0	0/0:11,0:11:30.10:0,30,410	0/0:20,0:20:57.16:0,57,743	0/0:15,0:15:45.14:0,45,601	0/0:20,0:20:57.18:0,57,759	0/0:15,0:15:42.12:0,42,553	1/1:1,22:23:63.18:712,63,0	1/1:2,16:18:48.14:545,48,0	1/1:2,29:31:87.25:986,87,0	0/0:14,0:14:42.14:0,42,575	1/1:3,16:19:48.14:545,48,0	1/1:2,19:21:57.16:642,57,0	0/0:25,0:25:75.25:0,75,1024	1/1:3,17:20:51.14:579,51,0	0/0:10,0:10:27.09:0,27,369	0/0:15,0:15:39.12:0,39,518	1/1:3,17:20:48.14:545,48,0	1/1:1,14:15:39.07:420,39,0	1/1:1,18:19:54.15:613,54,0	1/1:0,9:9:21.06:238,21,0
chr10	5925637	.	GCA	G	13090.39	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=13.021;DP=645;FS=3.823;HRun=0;HaplotypeScore=92.5157;InbreedingCoeff=0.9995;MQ=95.18;MQ0=2;MQRankSum=-5.721;QD=39.43;ReadPosRankSum=2.634;VQSLOD=7.1068;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,31:32:75.25:1103,75,0	0/0:9,0:9:24.08:0,24,450	0/0:34,0:34:96.12:0,96,1741	0/0:26,0:26:75.20:0,75,1295	0/0:29,0:29:81.28:0,81,1495	1/1:4,23:27:60.20:883,60,0	1/1:0,21:21:51.17:751,51,0	1/1:0,28:28:84.28:1236,84,0	1/1:1,27:28:78.26:1148,78,0	0/0:31,0:31:93.31:0,93,1699	0/0:20,0:20:60.21:0,60,1121	0/0:28,0:28:84.26:0,84,1509	0/0:13,0:13:39.13:0,39,730	0/0:27,0:27:81.25:0,81,1452	1/1:0,29:28:78.26:1149,78,0	1/1:1,31:31:87.29:1281,87,0	1/1:6,14:20:45.15:659,45,0	0/0:23,0:23:63.22:0,63,1171	1/1:1,9:10:27.06:375,27,0	1/1:0,15:15:42.14:618,42,0	0/0:34,0:34:99:0,102,1910	1/1:0,11:11:33.11:486,33,0	0/0:16,0:16:48.16:0,48,899	0/0:23,0:23:69.22:0,69,1248	1/1:1,14:15:42.14:619,42,0	1/1:0,18:18:54.18:795,54,0	1/1:0,29:29:84.28:1237,84,0	1/1:0,17:17:51.17:751,51,0
chr10	5925663	.	TATCCGAAAGATGCCAGCATCAA	T	2869.78	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.050;DP=683;FS=8.113;HRun=0;HaplotypeScore=418.8692;InbreedingCoeff=0.9996;MQ=87.79;MQ0=2;MQRankSum=-7.058;QD=92.57;ReadPosRankSum=0.458;VQSLOD=2.4317;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:13,18:31:54.19:2965,54,0	0/0:13,0:13:39.13:0,39,4068	0/0:27,0:27:72.22:0,72,4149	0/0:23,0:23:57.19:0,57,3310	0/0:34,0:34:99:0,102,10129	0/0:23,0:23:69.24:0,69,6314	0/0:23,0:23:63.22:0,63,5727	0/0:29,0:29:87.30:0,87,6668	0/0:29,0:29:87.30:0,87,8205	0/0:29,0:29:81.27:0,81,7137	0/0:22,0:22:66.23:0,66,6704	0/0:34,0:34:99:0,102,9798	0/0:19,0:19:57.20:0,57,5407	0/0:21,0:21:60.21:0,60,5061	0/0:33,0:31:90.31:0,90,8796	0/0:40,0:39:99:0,114,9877	0/0:23,0:23:59.97:0,60,4198	0/0:17,0:17:48.13:0,48,4238	0/0:12,0:12:33.11:0,33,2008	0/0:21,0:21:63.22:0,63,6231	0/0:32,0:32:84.29:0,84,8060	0/0:18,0:18:51.18:0,51,5146	0/0:18,0:18:54.19:0,54,4937	0/0:21,0:21:60.21:0,60,6007	0/0:22,0:22:66.23:0,66,6673	0/0:16,0:16:48.16:0,48,4061	0/0:33,0:33:84.29:0,84,7670	0/0:20,0:20:39.60:0,40,3499
chr10	5925673	.	AT	A	663.43	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.691;DP=665;FS=23.598;HRun=1;HaplotypeScore=110.9401;InbreedingCoeff=0.9985;MQ=85.78;MQ0=2;MQRankSum=-7.413;QD=18.43;ReadPosRankSum=1.193;VQSLOD=2.5612;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:18:22.92:72,23,0	0/0:13,0:13:39.13:0,39,623	0/0:27,0:27:77.85:0,78,1123	0/0:18,0:18:51.12:0,51,719	0/0:33,0:33:99:0,99,1581	0/0:23,0:23:69.22:0,69,1080	0/0:26,0:26:78.25:0,78,1218	0/0:31,0:31:93.30:0,93,1438	0/0:32,0:32:96.31:0,96,1506	0/0:27,0:27:81.28:0,81,1295	0/0:23,0:23:69.24:0,69,1103	0/0:36,0:36:99:0,108,1699	0/0:18,0:18:54.18:0,54,863	0/0:19,0:19:57.19:0,57,903	0/0:32,0:30:90.31:0,90,1436	0/0:41,0:40:99:0,114,1770	1/1:0,18:18:51.17:712,51,0	0/0:15,0:15:45.15:0,45,719	0/0:14,0:14:39.13:0,39,623	0/0:24,0:24:72.25:0,72,1151	0/0:29,0:29:84.29:0,84,1340	0/0:19,0:19:57.19:0,57,906	0/0:20,0:20:60.20:0,60,959	0/0:23,0:23:66.23:0,66,1055	0/0:25,0:25:75.23:0,75,1174	0/0:18,0:18:54.18:0,54,864	0/0:29,0:29:87.26:0,87,1341	0/0:14,0:14:36.06:0,36,567
chr10	5927316	.	CCTCT	C	7884.08	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=-10.541;DP=511;FS=10.760;HRun=0;HaplotypeScore=188.1400;InbreedingCoeff=0.9188;MQ=65.05;MQ0=0;MQRankSum=-8.395;QD=48.37;ReadPosRankSum=-0.912;VQSLOD=4.5700;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:51.03:0,51,463	0/0:12,0:12:35.94:0,36,311	0/0:11,0:11:13.34:0,13,204	0/1:6,0:6:12.14:12,0,88	0/0:25,0:25:69.04:0,69,624	1/1:6,21:27:78.25:1438,78,0	1/1:2,18:20:51.17:987,51,0	0/0:21,0:21:49.96:0,50,451	1/1:0,12:12:36.12:697,36,0	0/0:25,0:25:75.04:0,75,679	0/0:28,0:28:66.03:0,66,596	0/0:15,0:15:42.02:0,42,380	0/0:33,0:33:95.26:0,95,845	0/0:23,0:23:54.03:0,54,488	1/1:3,20:23:48.16:929,48,0	1/1:1,13:14:39.12:721,39,0	0/0:22,0:22:66.04:0,66,598	0/0:7,0:7:18.01:0,18,163	1/1:4,13:17:39.13:755,39,0	1/1:1,13:14:39.13:755,39,0	0/0:10,0:10:29.97:0,30,264	1/1:0,12:12:36.12:696,36,0	0/0:29,0:28:75.04:0,75,678	0/0:23,0:23:60.92:0,61,546	1/1:3,15:18:48.14:894,48,0	0/0:20,0:20:37.55:0,38,445	0/0:17,0:17:39.02:0,39,354	0/0:6,0:6:18.01:0,18,163
chr10	5927368	.	AT	A	1651.81	PASS	AB=0.953;AC=19;AF=0.339;AN=56;BaseQRankSum=3.148;DP=506;FS=4.852;HRun=7;HaplotypeScore=134.8210;InbreedingCoeff=0.3412;MQ=76.13;MQ0=0;MQRankSum=-4.679;QD=6.83;ReadPosRankSum=1.937;VQSLOD=0.5034;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:60.10:0,60,665	0/0:8,0:8:24.05:0,24,286	0/0:26,1:24:32.33:0,32,356	0/1:14,0:13:13.78:14,0,22	0/0:26,0:26:72.06:0,72,833	0/1:27,0:27:46.39:46,0,60	0/1:14,0:14:10.76:11,0,11	1/1:5,23:28:69.07:667,69,0	0/1:20,0:20:15.58:40,0,16	0/0:21,0:21:60.08:0,60,684	0/0:21,0:21:48.09:0,48,560	0/0:18,0:18:48.13:0,48,569	0/0:25,0:25:69.10:0,69,780	0/0:23,0:23:57.14:0,57,686	0/1:17,0:17:22.09:26,0,22	0/1:15,0:15:20.92:21,0,23	0/0:20,0:20:53.30:0,53,437	0/0:10,0:10:21.04:0,21,238	0/1:18,0:18:1.84:2,0,127	1/1:20,0:20:7.37:59,7,0	0/0:8,0:8:24.06:0,24,289	1/1:14,0:14:11.11:41,11,0	0/0:20,0:20:51.09:0,51,582	0/0:16,0:16:39.10:0,39,463	0/1:12,0:12:1.81:30,0,2	0/1:5,13:18:21.95:398,0,22	1/1:3,12:15:30.05:299,30,0	1/1:3,7:10:18.04:183,18,0
chr10	5927375	.	TG	T	3585.02	PASS	AB=1.000;AC=26;AF=0.464;AN=56;BaseQRankSum=4.384;DP=512;FS=35.704;HRun=9;HaplotypeScore=124.9705;InbreedingCoeff=0.8340;MQ=74.79;MQ0=0;MQRankSum=-2.308;QD=14.88;ReadPosRankSum=2.242;VQSLOD=1.6599;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:23:47.98:0,48,516	0/0:9,0:9:24.02:0,24,261	0/0:28,0:25:27.91:0,28,254	0/1:14,0:13:16.79:17,0,17	0/0:27,0:27:66.06:0,66,727	1/1:5,23:28:66.03:603,66,0	1/1:1,11:12:27.01:247,27,0	1/1:25,0:25:17.76:87,18,0	1/1:2,20:22:54.03:493,54,0	0/0:24,0:24:57.08:0,57,613	0/0:20,0:20:47.65:0,48,501	0/0:15,1:16:39.12:0,39,451	0/0:25,0:25:57.05:0,57,616	0/0:24,0:24:56.94:0,57,625	1/1:5,11:16:32.20:252,32,0	1/1:3,13:16:36.02:329,36,0	0/0:8,0:18:40.32:0,40,218	0/0:10,0:10:24.03:0,24,254	1/1:9,9:18:35.49:291,35,0	1/1:1,21:23:59.75:522,60,0	0/0:11,0:11:30.04:0,30,314	1/1:0,15:15:32.92:289,33,0	0/0:23,0:23:50.93:0,51,532	0/0:13,0:13:36.09:0,36,405	1/1:1,11:12:33.02:301,33,0	0/1:18,0:18:46.26:56,0,46	1/1:15,0:15:4.38:60,4,0	1/1:7,0:7:13.01:39,13,0
chr10	5927593	.	C	CTCCCATTTGTGAAA	593.47	PASS	AB=0.771;AC=4;AF=0.67;AN=6;BaseQRankSum=-0.400;DP=18;FS=15.091;HRun=0;HaplotypeScore=40.9062;MQ=201.90;MQ0=0;MQRankSum=-0.267;QD=37.09;ReadPosRankSum=-0.133;VQSLOD=0.8862;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/1:4,1:7:7.33:410,0,7	0/1:6,0:7:54.60:227,0,55	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	1/1:1,0:1:3:25,3,0	./.	./.	./.	./.	./.
chr10	5927659	.	AGTTGTGTGT	A	1131	PASS	AC=10;AF=0.185;AN=54;BaseQRankSum=-3.173;DP=244;FS=0.000;HRun=0;HaplotypeScore=60.5923;InbreedingCoeff=0.6229;MQ=52.06;MQ0=1;MQRankSum=-0.940;QD=27.59;ReadPosRankSum=1.370;VQSLOD=2.7268;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:6:11.78:0,12,241	0/0:3,0:3:2.78:0,3,75	0/0:11,0:7:24.08:0,24,804	0/0:10,0:10:30.10:0,30,1001	0/0:8,0:8:3.01:0,3,111	0/0:13,0:13:19.35:0,19,134	0/0:13,0:13:16.15:0,16,68	1/1:0,10:10:21.90:492,22,0	0/0:14,0:14:9.98:0,10,40	0/0:10,0:10:30.10:0,30,1010	0/0:4,0:4:5.77:0,6,211	0/0:12,0:12:8.92:0,9,216	0/0:8,0:7:9.90:0,10,160	0/0:8,0:8:3.01:0,3,112	0/0:13,0:13:11.59:0,12,47	0/0:12,0:12:12.95:0,13,118	1/1:1,0:10:5.88:43,6,0	0/0:5,0:5:7.84:0,8,219	0/0:5,0:5:15.05:0,15,458	./.	0/0:11,0:11:12.04:0,12,371	0/0:1,0:1:2.74:0,3,12	0/0:8,0:8:6.02:0,6,204	0/0:12,0:12:5.67:0,6,94	0/0:10,0:10:5.49:0,5,24	1/1:0,8:8:18.05:410,18,0	1/1:2,5:7:9.50:245,10,0	1/1:0,6:6:3.01:91,3,0
chr10	5927661	.	T	TGTGTG	1245.93	PASS	AB=0.509;AC=34;AF=0.680;AN=50;BaseQRankSum=-4.510;DP=269;FS=1.097;HRun=0;HaplotypeScore=64.8569;InbreedingCoeff=0.5863;MQ=52.88;MQ0=1;MQRankSum=-1.404;QD=6.81;ReadPosRankSum=1.286;VQSLOD=1.7707;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:5,0:6:8.63:45,9,0	0/1:0,0:3:0:0,0,0	0/0:11,0:8:21.92:0,22,272	0/0:11,0:11:17.65:0,18,326	1/1:1,0:10:2.68:11,3,0	1/1:0,12:14:5.97:112,6,0	0/1:1,12:14:0.19:0,0,0	0/0:10,0:10:14.98:0,15,143	1/1:1,9:14:0.47:1,0,0	1/1:0,0:11:15.06:151,15,0	1/1:1,0:6:2.94:69,3,0	1/1:0,0:13:6.53:33,7,0	1/1:0,0:7:9.40:113,9,0	1/1:0,0:8:1.25:3,1,0	1/1:2,11:14:0.22:1,0,0	1/1:3,9:15:9.50:216,10,0	0/0:10,0:10:3.73:0,4,17	1/1:0,0:6:5.06:16,5,0	1/1:2,5:7:17.09:466,17,0	./.	1/1:0,0:11:7.27:111,7,0	./.	1/1:2,0:11:5.50:38,6,0	1/1:0,0:12:2.48:12,2,0	./.	0/0:8,0:8:12.02:0,12,121	0/0:7,0:7:6.47:0,6,56	0/0:6,0:6:3.01:0,3,33
chr10	5928088	.	T	TCACACA	2876.53	PASS	AB=1.000;AC=31;AF=0.574;AN=54;BaseQRankSum=1.970;DP=609;FS=8.174;HRun=0;HaplotypeScore=166.7704;InbreedingCoeff=0.4251;MQ=60.27;MQ0=20;MQRankSum=-4.703;QD=7.88;ReadPosRankSum=-5.291;VQSLOD=-0.6952;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/1:5,0:5:16.07:16,0,72	0/0:51,0:27:18.03:0,18,298	0/1:44,0:20:4.72:6,0,5	0/0:13,0:13:20.88:0,21,158	1/1:13,0:12:2.51:15,3,0	1/1:22,0:21:5.99:73,6,0	1/1:26,0:26:48.04:632,48,0	1/1:14,0:12:6.02:104,6,0	0/1:22,0:21:26.46:26,0,229	0/0:15,0:15:26.92:0,27,265	0/1:20,0:19:6.32:6,0,186	0/0:19,0:19:23.84:0,24,190	0/0:19,0:19:9.14:0,9,56	1/1:25,0:24:14.32:180,14,0	1/1:19,0:16:3.01:53,3,0	1/1:12,0:10:5.99:73,6,0	0/1:20,0:20:21.16:21,0,207	1/1:22,0:22:34:519,34,0	1/1:13,0:13:3.01:70,3,0	0/0:33,0:29:10.72:0,11,204	1/1:28,0:25:5.13:97,5,0	0/0:15,0:15:0.83:0,1,174	0/0:32,0:29:19.80:0,20,308	0/0:15,0:11:0.25:0,0,0	1/1:25,0:24:41.77:551,42,0	1/1:22,0:25:33.92:518,34,0	1/1:6,0:7:2.57:92,3,0
chr10	5928115	.	CAGAGAGAGAG	C	1399.91	PASS	AB=0.833;AC=14;AF=0.280;AN=50;BaseQRankSum=2.188;DP=600;FS=27.121;HRun=0;HaplotypeScore=190.8683;InbreedingCoeff=0.3029;MQ=45.24;MQ0=24;MQRankSum=-1.248;QD=6.57;ReadPosRankSum=-1.135;VQSLOD=1.2224;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:8.95:0,9,386	0/1:5,0:5:13.93:65,0,14	./.	./.	0/1:10,7:15:10.85:11,0,16	0/0:17,0:15:10.32:0,10,369	0/0:22,0:21:21.28:0,21,856	0/0:29,0:28:19.62:0,20,442	0/0:19,0:17:21.07:0,21,809	1/1:16,9:25:15.13:469,15,0	./.	0/1:13,4:18:10.24:41,0,10	0/1:12,6:19:31.47:76,0,31	1/1:10,5:17:3.73:21,4,0	0/0:30,0:28:33.11:0,33,1465	0/0:14,0:11:12.04:0,12,427	0/0:12,0:10:18.06:0,18,641	1/1:16,8:25:3.38:50,3,0	0/0:31,0:30:49.08:0,49,1573	0/0:14,0:14:6.02:0,6,272	1/1:33,0:29:12.04:357,12,0	0/0:30,0:26:23.71:0,24,1030	0/1:12,2:15:15.97:50,0,16	0/1:36,0:32:85.95:417,0,86	0/0:18,0:12:14.20:0,14,634	0/0:31,0:29:57.19:0,57,1957	0/0:23,0:23:27.51:0,28,687	0/0:8,0:8:18.03:0,18,485
chr10	5929951	.	TTCTGTCTC	T	388.67	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.206;DP=440;FS=0.000;HRun=0;HaplotypeScore=110.3507;InbreedingCoeff=0.8833;MQ=80.49;MQ0=0;MQRankSum=-2.976;QD=32.39;ReadPosRankSum=0.978;VQSLOD=3.3937;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:69.24:0,69,2887	0/0:8,0:8:24.08:0,24,910	0/0:23,0:17:9.66:0,10,780	0/0:35,0:26:51.60:0,52,1525	0/0:19,0:19:54.19:0,54,2074	0/0:11,0:11:30.10:0,30,1003	0/0:8,0:8:18.06:0,18,693	0/0:26,0:26:69.24:0,69,2815	0/0:8,0:8:24.07:0,24,846	0/0:20,0:20:60.21:0,60,2427	0/0:15,0:15:42.13:0,42,1607	0/0:11,0:11:33.11:0,33,1333	0/0:24,0:24:72.25:0,72,2835	0/0:25,0:25:69.22:0,69,2628	0/0:6,0:6:15.05:0,15,617	0/0:9,0:9:24.08:0,24,1006	1/1:5,7:12:18.06:479,18,0	0/0:12,0:12:27.09:0,27,1031	0/0:9,0:9:24.08:0,24,930	0/0:8,0:8:21.06:0,21,689	0/0:34,0:34:87.27:0,87,3418	0/0:5,0:5:15.05:0,15,640	0/0:10,0:10:27.09:0,27,1153	0/0:23,0:23:60.17:0,60,2204	0/0:7,0:7:15.04:0,15,539	0/0:13,0:13:36.12:0,36,1478	0/0:18,0:18:51.16:0,51,1989	0/0:13,0:13:39.09:0,39,1357
chr10	5930004	.	C	CTCCCCTCTA	670.75	PASS	AB=1.000;AC=9;AF=0.167;AN=54;BaseQRankSum=4.161;DP=370;FS=3.704;HRun=0;HaplotypeScore=106.1815;InbreedingCoeff=0.2344;MQ=64.46;MQ0=3;MQRankSum=-3.579;QD=11.37;ReadPosRankSum=0.960;VQSLOD=1.6249;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:81.28:0,81,2159	0/0:4,0:4:9.03:0,9,226	0/0:33,0:19:38.08:0,38,707	0/0:31,0:10:18.37:0,18,203	0/0:14,0:14:33.10:0,33,776	0/1:5,0:5:90.86:91,0,98	0/1:11,0:11:11.67:12,0,153	0/0:19,0:20:33.09:0,33,642	0/0:4,0:4:8.49:0,8,77	0/0:18,0:18:42.13:0,42,1103	0/0:12,0:12:21.04:0,21,552	0/0:14,0:14:27.09:0,27,701	0/0:21,0:21:57.11:0,57,1256	0/0:26,0:26:75.24:0,75,1834	0/1:6,0:6:24.87:25,0,170	0/1:8,0:8:12.91:13,0,81	1/1:7,12:20:17.91:563,18,0	0/0:7,0:7:21.07:0,21,532	0/0:5,0:5:11.78:0,12,162	./.	0/0:16,0:16:42.13:0,42,1021	0/1:7,0:7:93.85:94,0,193	0/0:12,0:12:27.09:0,27,698	0/0:16,0:16:42.14:0,42,1050	1/1:2,0:2:2.74:12,3,0	0/0:9,0:9:15.03:0,15,344	0/0:14,0:14:36.11:0,36,932	0/0:6,0:6:9.03:0,9,265
chr10	5930255	.	TTTTGTTTTGG	T	18912.71	PASS	AB=1.000;AC=52;AF=0.929;AN=56;BaseQRankSum=3.343;DP=582;FS=3.603;HRun=0;HaplotypeScore=177.4717;InbreedingCoeff=0.5091;MQ=59.30;MQ0=8;MQRankSum=-4.868;QD=35.35;ReadPosRankSum=4.877;VQSLOD=4.4639;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,17:19:20.96:641,21,0	1/1:1,12:13:21.54:682,22,0	0/0:47,0:29:57.41:0,57,1412	0/1:44,0:19:1.24:1,0,239	1/1:9,18:27:33.03:990,33,0	1/1:3,19:22:33.11:1070,33,0	1/1:0,31:31:36.02:1168,36,0	0/1:32,0:32:31.37:444,0,31	1/1:3,17:20:27.09:876,27,0	1/1:1,19:19:56.91:1104,57,0	1/1:0,11:11:24:657,24,0	1/1:11,8:19:50.78:966,51,0	1/1:3,19:22:26.74:875,27,0	1/1:1,10:11:21.07:682,21,0	1/1:0,23:23:39.13:1267,39,0	1/1:1,11:12:11.85:389,12,0	1/1:1,0:21:9.03:222,9,0	1/1:3,27:30:17.77:584,18,0	1/1:4,24:25:66.55:1012,67,0	1/1:2,12:14:23.92:542,24,0	1/1:1,9:10:3.01:97,3,0	1/1:2,9:11:11.96:309,12,0	1/1:3,9:12:11.93:308,12,0	1/1:1,16:17:18.06:519,18,0	1/1:1,21:22:24.08:779,24,0	1/1:0,18:18:47.87:878,48,0	1/1:0,20:20:42.14:1363,42,0	1/1:1,5:6:15.05:487,15,0
chr10	5930397	.	TC	T	659.50	PASS	AC=2;AF=0.037;AN=54;BaseQRankSum=5.254;DP=596;FS=2.542;HRun=7;HaplotypeScore=64.3082;InbreedingCoeff=0.9968;MQ=92.41;MQ0=0;MQRankSum=-0.814;QD=22.74;ReadPosRankSum=-0.631;VQSLOD=3.2643;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,99,1228	0/0:10,0:10:30.10:0,30,377	0/0:25,0:25:72.13:0,72,842	0/0:29,0:29:59.25:0,59,723	0/0:23,0:23:54.15:0,54,654	0/0:25,0:24:72.23:0,72,906	0/0:26,0:26:72.19:0,72,888	0/0:21,0:20:57.15:0,57,691	0/0:22,0:22:48.14:0,48,591	0/0:17,0:17:45.14:0,45,566	0/0:17,0:17:48.15:0,48,604	0/0:21,0:21:63.16:0,63,762	0/0:15,0:15:39.12:0,39,490	0/0:15,0:15:42.12:0,42,515	0/0:24,0:24:63.19:0,63,779	0/0:18,0:18:54.16:0,54,666	1/1:0,29:29:75.13:754,75,0	0/0:17,0:17:48.07:0,48,569	0/0:30,0:30:81.22:0,81,981	0/0:11,0:11:33.11:0,33,415	0/0:27,0:27:78.25:0,78,981	0/0:23,0:23:60.18:0,60,740	0/0:24,0:24:66.21:0,66,829	0/0:31,0:31:84.24:0,84,1020	0/0:16,0:16:23.47:0,23,540	0/0:24,0:24:60.18:0,60,743	0/0:20,0:20:57.18:0,57,717	./.
chr10	5931482	.	T	TTAGAA	2267.89	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-7.066;DP=633;FS=0.000;HRun=0;HaplotypeScore=116.1829;InbreedingCoeff=0.9817;MQ=70.17;MQ0=0;MQRankSum=-1.638;QD=70.87;ReadPosRankSum=0.521;VQSLOD=5.0280;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:87.27:0,87,1695	0/0:11,0:11:29.61:0,30,596	0/0:10,0:10:18.05:0,18,332	0/0:9,0:9:17.65:0,18,304	0/0:20,0:20:51.16:0,51,989	0/0:32,0:32:90.31:0,90,1817	0/0:32,0:32:72.25:0,72,1462	0/0:26,0:26:69.21:0,69,1298	0/0:27,0:27:66.23:0,66,1340	0/0:32,0:32:96.33:0,96,1925	0/0:19,0:19:48.16:0,48,964	0/0:22,0:22:54.19:0,54,1097	0/0:23,0:23:60.21:0,60,1218	0/0:27,0:27:75.24:0,75,1487	0/0:22,0:22:54.17:0,54,1060	0/0:18,0:18:54.19:0,54,1096	1/1:4,27:32:78.27:2363,78,0	0/0:20,0:20:39.94:0,40,1077	0/0:10,0:10:27.09:0,27,548	0/0:19,0:19:51.16:0,51,998	0/0:32,0:32:90.31:0,90,1817	0/0:23,0:23:66.15:0,66,1225	0/0:15,0:15:42.13:0,42,809	0/0:23,0:23:66.21:0,66,1304	0/0:26,0:26:78.25:0,78,1539	0/0:26,0:26:69.24:0,69,1378	0/0:33,0:33:87.28:0,87,1729	0/0:12,0:12:36.12:0,36,731
chr10	5932068	.	TGAGAGG	T	281.02	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=1.604;DP=631;FS=4.825;HRun=0;HaplotypeScore=179.1504;InbreedingCoeff=0.9833;MQ=74.19;MQ0=0;MQRankSum=-3.961;QD=46.84;ReadPosRankSum=-2.509;VQSLOD=2.9641;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,5:6:15.05:369,15,0	0/0:11,0:11:30.08:0,30,955	0/0:20,0:18:43.36:0,43,1425	0/0:17,0:14:36.10:0,36,987	0/0:38,0:38:99:0,111,3451	0/0:21,0:21:56.82:0,57,1290	0/0:18,0:18:54.17:0,54,1135	0/0:38,0:38:99:0,114,3468	0/0:18,0:18:54.17:0,54,1247	0/0:28,0:28:84.26:0,84,2466	0/0:23,0:23:69.24:0,69,2127	0/0:19,0:19:57.20:0,57,1752	0/0:18,0:18:47.94:0,48,1535	0/0:21,0:21:63.22:0,63,1953	0/0:21,0:20:40.72:0,41,1200	0/0:14,0:14:42.14:0,42,992	0/0:27,0:27:72.21:0,72,1993	0/0:18,0:18:51.16:0,51,1604	0/0:19,0:19:57.18:0,57,1202	0/0:39,0:39:99:0,114,2214	0/0:15,0:15:45.15:0,45,1332	0/0:23,0:23:69.24:0,69,1602	0/0:38,0:38:99:0,111,3307	0/0:27,0:27:75.26:0,75,2290	0/0:18,0:18:54.18:0,54,1198	0/0:28,0:28:64.09:0,64,2167	0/0:28,0:27:81.28:0,81,2550	0/0:20,0:20:54.14:0,54,1576
chr10	5932072	.	AG	A	1747.90	PASS	AB=0.952;AC=18;AF=0.321;AN=56;BaseQRankSum=-5.275;DP=609;FS=1.445;HRun=2;HaplotypeScore=112.4689;InbreedingCoeff=0.7211;MQ=72.93;MQ0=0;MQRankSum=0.136;QD=9.15;ReadPosRankSum=-3.119;VQSLOD=0.2710;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,0:6:11.10:35,11,0	0/0:11,0:11:30.08:0,30,362	0/0:19,0:17:20.03:0,20,294	0/0:16,0:13:21.47:0,21,200	0/0:36,0:36:99:0,102,1246	1/1:18,1:19:2.93:137,3,0	1/1:13,2:15:7.27:153,7,0	0/0:38,0:38:99:0,112,1302	0/1:16,1:17:14.10:23,0,14	0/0:24,0:24:72.10:0,72,806	0/0:21,0:21:61.71:0,62,711	0/0:17,0:17:50.63:0,51,603	0/0:20,0:20:50.87:0,51,535	0/0:22,0:22:63.12:0,63,736	1/1:21,0:21:2.74:87,3,0	1/1:14,1:15:3.58:100,4,0	0/0:26,0:26:66.07:0,66,661	0/0:17,0:17:48.01:0,48,506	1/1:17,0:17:21.63:186,22,0	1/1:8,28:36:85.83:943,86,0	0/0:15,0:15:42.08:0,42,492	0/1:23,1:24:2.05:145,0,2	0/0:37,0:37:83.69:0,84,1123	0/0:26,0:26:69.19:0,69,817	1/1:20,0:20:0.76:118,1,0	0/0:26,0:26:70.03:0,70,754	0/0:29,0:28:83.86:0,84,941	0/0:18,0:18:48.14:0,48,589
chr10	5932074	.	G	GTT	642.15	PASS	AB=0.991;AC=13;AF=0.232;AN=56;BaseQRankSum=-3.297;DP=635;FS=9.054;HRun=13;HaplotypeScore=142.9044;InbreedingCoeff=0.0664;MQ=73.54;MQ0=0;MQRankSum=1.483;QD=2.60;ReadPosRankSum=-3.746;VQSLOD=-0.6532;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:14:6.92:135,7,0	0/0:11,0:11:18.54:0,19,56	0/1:19,0:18:1.33:1,0,60	0/0:16,0:14:15.63:0,16,110	0/0:35,0:35:23.70:0,24,201	0/0:19,0:19:18.64:0,19,213	0/0:15,0:15:13.31:0,13,166	0/0:39,0:41:12.39:0,12,193	0/0:17,0:17:38.09:0,38,274	0/1:25,0:25:22.67:23,0,63	0/0:23,0:23:2.19:0,2,91	0/1:17,0:17:44.43:44,0,86	0/0:22,0:22:17.91:0,18,53	0/1:22,1:23:8.96:9,0,116	0/1:25,0:25:31.36:31,0,195	0/0:11,0:11:20.14:0,20,151	1/1:8,13:28:16.14:384,16,0	0/0:20,0:20:14.91:0,15,46	0/1:18,0:18:28.13:28,0,127	0/0:36,0:36:71.71:0,72,390	0/0:14,0:14:25.88:0,26,160	0/0:23,0:23:44.18:0,44,315	0/0:37,0:38:18.41:0,18,122	0/0:27,0:27:35.24:0,35,124	0/1:20,0:20:37.70:38,0,147	0/1:26,0:26:44.08:80,0,44	0/1:30,0:29:23.81:24,0,90	0/0:19,0:19:31.31:0,31,117
chr10	5932087	.	T	TC	9239.27	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-15.391;DP=620;FS=0.000;HRun=1;HaplotypeScore=95.1144;InbreedingCoeff=0.9879;MQ=74.49;MQ0=0;MQRankSum=-2.050;QD=25.18;ReadPosRankSum=2.497;VQSLOD=4.7694;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:23.40:0,23,156	1/1:2,11:13:27.09:345,27,0	0/0:17,0:15:7.46:0,7,125	0/0:17,0:14:31.92:0,32,226	1/1:5,28:35:69.40:961,69,0	0/0:15,0:15:38.17:0,38,425	0/0:13,0:13:35.11:0,35,380	1/1:7,33:41:99:1156,108,0	0/0:25,0:25:69.07:0,69,696	1/1:3,14:19:27.51:499,28,0	1/1:3,19:24:51.72:549,52,0	1/1:5,10:18:45.07:505,45,0	1/1:0,23:23:30.57:383,31,0	1/1:6,21:27:48.40:566,48,0	0/0:27,0:27:55.93:0,56,601	0/0:13,0:13:34.59:0,35,344	0/0:23,0:23:29.38:0,29,207	1/1:2,14:16:24.08:306,24,0	0/0:19,0:19:43.13:0,43,435	0/0:32,0:32:83.86:0,84,722	1/1:10,6:16:37.14:345,37,0	0/0:23,0:23:63.10:0,63,673	1/1:4,31:36:73.60:976,74,0	1/1:1,25:26:58.07:728,58,0	0/0:18,0:18:35.48:0,35,382	1/1:1,16:22:63.09:703,63,0	1/1:4,26:30:58.01:695,58,0	1/1:1,16:19:42.99:521,43,0
chr10	5932351	.	C	CCATATCT	1713.42	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.737;DP=770;FS=3.598;HRun=0;HaplotypeScore=176.1265;InbreedingCoeff=0.9996;MQ=81.17;MQ0=0;MQRankSum=-6.482;QD=68.54;ReadPosRankSum=0.243;VQSLOD=3.9523;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,17:25:45.15:1808,45,0	0/0:12,0:12:36.10:0,36,857	0/0:22,0:22:66.23:0,66,1670	0/0:21,0:21:57.07:0,57,1242	0/0:39,0:39:99:0,114,2837	0/0:44,0:44:99:0,123,3103	0/0:29,0:29:78.23:0,78,1882	0/0:36,0:36:99:0,99,2436	0/0:37,0:37:99:0,108,2693	0/0:32,0:32:93.30:0,93,2243	0/0:25,0:25:72.22:0,72,1760	0/0:22,0:22:66.20:0,66,1678	0/0:30,0:30:84.28:0,84,2092	0/0:25,0:25:75.26:0,75,1946	0/0:31,0:31:93.31:0,93,2389	0/0:39,0:39:99:0,108,2780	0/0:19,0:19:54.19:0,54,1359	0/0:12,0:12:33.10:0,33,734	0/0:27,0:27:72.25:0,72,1858	0/0:30,0:30:81.28:0,81,2078	0/0:29,0:29:75.03:0,75,1886	0/0:25,0:25:72.22:0,72,1791	0/0:43,0:43:99:0,126,3244	0/0:21,0:21:60.21:0,60,1483	0/0:18,0:18:54.19:0,54,1388	0/0:29,0:29:75.26:0,75,1945	0/0:32,0:32:96.31:0,96,2300	0/0:16,0:16:45.14:0,45,1132
chr10	5933311	.	TC	T	606.18	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.284;DP=804;FS=4.568;HRun=2;HaplotypeScore=100.4463;InbreedingCoeff=0.9998;MQ=88.59;MQ0=0;MQRankSum=-0.560;QD=26.36;ReadPosRankSum=2.520;VQSLOD=3.4242;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:69.23:0,69,1026	0/0:22,0:22:66.20:0,66,947	0/0:25,0:25:72.24:0,72,1049	0/0:34,0:34:94.15:0,94,1243	0/0:31,0:31:93.30:0,93,1362	0/0:40,0:40:99:0,117,1751	0/0:16,0:16:48.16:0,48,718	0/0:31,0:31:93.29:0,93,1339	0/0:28,0:28:78.26:0,78,1166	0/0:43,0:43:99:0,129,1846	0/0:32,0:32:96.30:0,96,1397	0/0:28,0:28:72.24:0,72,1079	0/0:26,0:26:72.24:0,72,1078	0/0:28,0:28:78.26:0,78,1163	0/0:30,0:30:84.27:0,84,1237	0/0:22,0:22:63.21:0,63,943	1/1:1,22:23:54.18:701,54,0	0/0:30,0:30:90.30:0,90,1349	0/0:14,0:14:39.08:0,39,518	0/0:25,0:25:72.22:0,72,1039	0/0:15,0:15:42.13:0,42,608	0/0:57,0:57:99:0,163,2387	0/0:44,0:44:99:0,126,1826	0/0:32,0:32:87.28:0,87,1282	0/0:25,0:25:75.23:0,75,1086	0/0:26,0:26:75.24:0,75,1089	0/0:35,0:35:99:0,99,1467	0/0:13,0:13:39.12:0,39,564
chr10	5933620	.	C	CG	1367.88	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.823;DP=1053;FS=14.540;HRun=1;HaplotypeScore=177.0982;InbreedingCoeff=0.9995;MQ=74.06;MQ0=3;MQRankSum=-4.641;QD=36.97;ReadPosRankSum=1.057;VQSLOD=1.0926;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,36:37:99:1463,105,0	0/0:17,0:17:48.11:0,48,604	0/0:39,0:35:99:0,99,1206	0/0:51,0:44:99:0,126,1465	0/0:33,0:33:99:0,99,1285	0/0:26,0:24:72.23:0,72,934	0/0:35,0:34:99:0,102,1295	0/0:40,0:39:99:0,108,1362	0/0:58,0:55:99:0,150,1945	0/0:44,0:44:99:0,123,1559	0/0:31,0:31:90.29:0,90,1168	0/0:41,0:41:99:0,123,1594	0/0:39,0:39:99:0,108,1382	0/0:54,0:54:99:0,163,2086	0/0:60,0:60:99:0,153,1961	0/0:46,0:46:99:0,135,1752	0/0:35,0:35:90.29:0,90,1168	0/0:26,0:26:66.21:0,66,857	0/0:18,0:16:48.11:0,48,580	0/0:28,0:27:78.24:0,78,998	0/0:82,0:80:99:0,235,3035	0/0:41,0:40:99:0,117,1516	0/0:33,0:33:93.30:0,93,1205	0/0:33,0:33:90.25:0,90,1137	0/0:25,0:24:72.23:0,72,935	0/0:32,0:32:84.27:0,84,1090	0/0:39,0:39:99:0,117,1516	0/0:10,0:10:30.06:0,30,358
chr10	5934006	.	G	GA	8945.30	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-13.803;DP=657;FS=0.659;HRun=1;HaplotypeScore=158.1164;InbreedingCoeff=0.9993;MQ=80.00;MQ0=0;MQRankSum=-2.836;QD=42.19;ReadPosRankSum=2.764;VQSLOD=4.3689;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:87.28:0,87,1133	0/0:7,0:7:21.07:0,21,274	0/0:22,0:21:59.61:0,60,767	0/0:24,0:23:53.44:0,53,673	0/0:31,0:31:81.67:0,82,1013	1/1:0,17:17:39.08:618,39,0	1/1:1,21:22:57.06:867,57,0	0/0:38,0:38:99:0,111,1420	1/1:0,27:27:75.26:1197,75,0	0/0:15,0:15:39.12:0,39,491	0/0:19,0:19:57.18:0,57,734	0/0:19,0:19:50.68:0,51,653	0/0:28,0:28:75.23:0,75,954	0/0:26,0:26:71.87:0,72,900	1/1:0,23:23:60.20:958,60,0	1/1:0,19:19:51.17:815,51,0	0/0:38,0:38:99:0,111,1442	0/0:17,0:17:51.15:0,51,649	1/1:0,20:20:60.20:930,60,0	1/1:0,21:21:57.19:885,57,0	0/0:22,0:22:63.16:0,63,785	1/1:0,36:36:99:1577,99,0	0/0:22,0:22:60.19:0,60,776	0/0:19,0:19:51.17:0,51,661	1/1:3,24:27:69.03:1099,69,0	0/0:31,0:31:90.04:0,90,1100	0/0:25,0:25:69.20:0,69,865	0/0:13,0:13:36.12:0,36,466
chr10	5934277	.	G	GTC	5050.37	PASS	AB=0.903;AC=32;AF=0.571;AN=56;BaseQRankSum=-3.209;DP=575;FS=14.410;HRun=0;HaplotypeScore=119.1570;InbreedingCoeff=-0.1086;MQ=47.11;MQ0=18;MQRankSum=1.137;QD=10.72;ReadPosRankSum=3.734;VQSLOD=3.6554;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:21:54.01:0,54,615	1/1:3,0:7:5.75:45,6,0	0/0:26,0:14:33.38:0,33,267	0/0:27,0:13:33.04:0,33,340	1/1:16,0:20:5.11:205,5,0	0/1:16,0:13:7.15:129,0,7	0/1:20,0:19:25.12:112,0,25	1/1:37,0:36:98.28:773,98,0	1/1:15,0:14:8.95:90,9,0	0/1:21,0:19:98.64:218,0,99	1/1:5,0:10:2.44:27,2,0	1/1:17,0:16:17.97:148,18,0	0/1:5,0:15:30.89:56,0,31	0/1:6,0:10:19.10:19,0,60	0/1:23,0:23:11.96:210,0,12	0/1:18,0:18:8.02:142,0,8	0/1:21,0:20:1.85:187,0,2	0/1:23,0:22:99:148,0,165	0/1:22,0:19:33.37:223,0,33	0/1:23,0:23:11.79:207,0,12	1/1:18,0:15:14.89:135,15,0	0/1:28,0:26:0.55:206,0,1	0/1:25,0:24:4.12:299,0,4	0/0:10,0:29:8.97:0,9,70	0/1:31,0:30:17.30:216,0,17	1/1:1,22:23:53.72:783,54,0	0/1:4,15:19:2.19:379,0,2	0/1:2,5:8:8.38:95,0,8
chr10	5934380	.	C	CTGAT	34523.54	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-9.136;DP=620;FS=7.410;HRun=0;HaplotypeScore=80.9982;InbreedingCoeff=0.9929;MQ=94.17;MQ0=1;MQRankSum=-11.617;QD=61.76;ReadPosRankSum=6.384;VQSLOD=6.4609;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,35:38:87.21:2208,87,0	1/1:1,6:7:18.06:492,18,0	0/0:33,0:33:60.63:0,61,1362	0/0:28,0:28:74.45:0,74,1259	1/1:1,23:26:66.70:1778,67,0	1/1:1,17:18:45.15:1190,45,0	1/1:2,11:13:27.09:727,27,0	1/1:3,21:25:75.22:1801,75,0	1/1:0,14:15:42.14:1147,42,0	1/1:6,17:24:63.20:1569,63,0	1/1:0,18:18:42.14:1147,42,0	1/1:1,12:13:33.11:903,33,0	1/1:1,20:25:57.20:1559,57,0	1/1:1,18:22:39.13:1021,39,0	1/1:4,24:31:63.21:1636,63,0	1/1:1,16:18:42.14:1125,42,0	1/1:0,26:27:60.21:1640,60,0	1/1:1,17:19:48.16:1293,48,0	1/1:6,11:18:48.09:1108,48,0	1/1:1,23:25:60.12:1514,60,0	1/1:1,19:19:33.31:980,33,0	1/1:2,18:21:45.15:1184,45,0	1/1:0,17:16:45.15:1202,45,0	1/1:0,30:29:72.25:1969,72,0	1/1:1,20:23:42.14:1147,42,0	1/1:4,23:30:84.18:2054,84,0	1/1:2,23:25:57.20:1556,57,0	1/1:0,10:10:21.07:575,21,0
chr10	5934710	.	TCTCA	T	5161.53	PASS	AB=0.992;AC=36;AF=0.643;AN=56;BaseQRankSum=-11.508;DP=638;FS=4.299;HRun=0;HaplotypeScore=181.3309;InbreedingCoeff=-0.0702;MQ=59.92;MQ0=14;MQRankSum=5.790;QD=9.78;ReadPosRankSum=1.138;VQSLOD=4.0489;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:15:0,15,215	1/1:4,0:4:8.99:75,9,0	0/0:35,0:12:11.98:0,12,193	0/0:52,0:19:24.22:0,24,275	0/1:18,0:18:17.03:127,0,17	1/1:9,0:9:13.89:123,14,0	1/1:17,0:16:13.99:148,14,0	1/1:30,0:28:70.05:601,70,0	0/1:25,0:25:49.38:95,0,49	0/1:31,0:30:99:374,0,209	1/1:16,0:15:32.97:277,33,0	0/1:21,0:21:2.39:83,0,2	0/1:27,0:27:48.63:246,0,49	1/1:35,0:35:37.69:303,38,0	0/1:29,0:29:42.99:166,0,43	0/1:22,0:22:23.76:176,0,24	1/1:2,16:18:15.05:283,15,0	0/1:16,0:16:65.27:163,0,65	0/1:18,0:16:29.42:164,0,29	0/1:21,0:21:29.73:157,0,30	1/1:24,0:24:35.85:287,36,0	1/1:23,0:21:20.14:202,20,0	1/1:10,0:10:14.60:124,15,0	1/1:24,0:24:20.21:153,20,0	0/1:21,0:21:21.52:136,0,22	0/1:30,0:29:34.98:462,0,35	0/1:31,0:30:61.29:196,0,61	0/1:7,1:8:1.61:37,0,2
chr10	5934712	.	TCA	T	8335.16	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-5.401;DP=649;FS=0.615;HRun=0;HaplotypeScore=154.8895;InbreedingCoeff=0.8490;MQ=58.78;MQ0=15;MQRankSum=2.539;QD=15.46;ReadPosRankSum=1.933;VQSLOD=4.9671;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:1.18:0,1,146	1/1:3,0:3:8.99:75,9,0	0/0:35,0:12:12.41:0,12,193	0/0:51,0:18:21.59:0,22,247	1/1:17,0:17:19.55:181,20,0	1/1:10,1:11:18:180,18,0	1/1:15,3:17:16.24:192,16,0	1/1:31,0:29:75.29:712,75,0	1/1:17,6:23:37.29:409,37,0	1/1:30,0:29:41.43:470,41,0	1/1:17,0:16:35.95:298,36,0	1/1:22,0:22:20.98:149,21,0	1/1:28,0:27:36.05:328,36,0	1/1:35,0:35:40.59:363,41,0	1/1:26,6:32:65.12:748,65,0	1/1:20,4:24:22.52:366,23,0	1/1:17,0:17:14.94:116,15,0	1/1:15,0:15:31.76:237,32,0	1/1:19,1:18:34.85:309,35,0	1/1:16,6:22:41.45:480,41,0	1/1:25,0:25:35.90:289,36,0	1/1:20,3:21:28.47:380,28,0	1/1:11,0:11:14.99:126,15,0	1/1:24,0:24:29.93:242,30,0	1/1:18,3:21:26.61:334,27,0	1/1:28,3:30:52.86:698,53,0	1/1:28,3:30:57.72:582,58,0	1/1:8,0:8:13.07:71,13,0
chr10	5934737	.	C	CTG	107.39	PASS	AB=0.963;AC=12;AF=0.214;AN=56;BaseQRankSum=6.824;DP=733;FS=8.214;HRun=0;HaplotypeScore=209.2489;InbreedingCoeff=0.0261;MQ=50.71;MQ0=20;MQRankSum=0.975;QD=0.40;ReadPosRankSum=4.611;VQSLOD=1.0924;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:23.03:0,23,177	0/0:6,0:6:4.36:0,4,28	0/0:30,0:7:2.88:0,3,19	0/0:46,0:11:9.36:0,9,91	0/0:27,0:27:20.25:0,20,150	0/0:14,0:13:2.64:0,3,21	0/0:17,0:16:8.25:0,8,69	0/1:46,0:44:20.52:21,0,235	0/0:29,0:29:5.44:0,5,344	0/0:28,0:27:43.74:0,44,328	1/1:16,0:15:2.68:12,3,0	0/0:29,0:29:17.97:0,18,116	0/0:32,0:31:22.06:0,22,168	0/0:42,0:42:26.63:0,27,221	0/1:36,0:36:34.44:34,0,198	0/1:25,0:25:2.13:2,0,140	0/0:18,0:18:27.01:0,27,249	0/0:15,0:15:14.54:0,15,101	0/0:24,0:22:30.36:0,30,353	0/1:28,0:28:23.39:23,0,132	0/0:23,0:22:5.79:0,6,50	0/0:26,0:24:5.87:0,6,62	1/1:18,0:17:0.89:2,1,0	0/0:28,0:28:9.36:0,9,133	0/1:25,0:25:7.60:8,0,85	0/1:40,1:40:75.28:75,0,165	0/1:24,1:23:4.48:55,0,4	0/1:7,3:10:1.16:1,0,5
chr10	5934741	.	C	CTG	2558.78	PASS	AB=0.992;AC=33;AF=0.589;AN=56;BaseQRankSum=7.840;DP=730;FS=32.465;HRun=0;HaplotypeScore=196.0963;InbreedingCoeff=0.0856;MQ=50.09;MQ0=16;MQRankSum=-2.331;QD=4.59;ReadPosRankSum=6.111;VQSLOD=1.4337;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:29.49:0,29,221	1/1:6,0:6:5.91:39,6,0	0/0:28,0:8:1.21:0,1,55	0/1:43,0:8:7.03:7,0,71	0/0:27,0:27:12.87:0,13,116	0/1:15,1:15:11.34:11,0,12	0/1:16,0:15:9.78:10,0,18	1/1:47,0:45:10.50:305,11,0	1/1:28,0:28:0.34:266,0,0	0/1:26,0:26:99:135,0,181	1/1:15,0:15:8.93:63,9,0	0/1:28,0:28:39.70:40,0,61	0/1:31,0:31:70.18:92,0,70	0/0:44,0:44:22.84:0,23,215	0/1:35,0:35:38.27:160,0,38	1/1:23,0:23:10.07:110,10,0	0/0:19,0:19:35.91:0,36,305	0/1:14,0:14:7.78:67,0,8	0/1:24,0:23:38.15:287,0,38	1/1:27,0:27:18.12:155,18,0	0/0:25,0:24:2.54:0,3,24	0/1:27,0:25:29.50:64,0,29	1/1:20,0:19:2.86:24,3,0	0/1:26,0:26:6.31:6,0,79	1/1:25,0:25:21.57:125,22,0	1/1:40,1:40:36.84:412,37,0	1/1:28,1:27:39.41:270,39,0	1/1:7,3:10:11.03:86,11,0
chr10	5934745	.	CTG	C	1997.92	PASS	AB=0.976;AC=32;AF=0.571;AN=56;BaseQRankSum=-4.016;DP=741;FS=11.468;HRun=0;HaplotypeScore=199.3308;InbreedingCoeff=-0.1927;MQ=53.47;MQ0=15;MQRankSum=2.898;QD=3.09;ReadPosRankSum=-1.383;VQSLOD=1.7625;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:27:18.33:126,18,0	1/1:0,8:8:5.95:43,6,0	0/0:27,0:9:17.89:0,18,140	0/1:33,0:9:5.68:6,0,40	1/1:26,0:26:5.93:42,6,0	1/1:17,0:16:1.35:20,1,0	0/1:16,0:15:1.23:7,0,1	0/1:23,29:50:99:466,0,115	0/1:28,0:28:21.33:124,0,21	0/1:27,0:27:82.34:201,0,82	0/0:16,0:16:3.22:0,3,26	1/1:33,0:33:12.27:80,12,0	0/1:31,1:31:6.98:112,0,7	1/1:42,0:42:28.80:224,29,0	0/1:34,0:34:25.77:40,0,26	0/1:24,0:24:5.59:6,0,21	0/0:20,0:20:35.57:0,36,225	0/1:15,0:15:46.41:46,0,60	0/1:25,0:24:53.78:103,0,54	0/0:31,0:31:9.70:0,10,75	0/1:23,0:22:15.13:19,0,15	0/1:27,0:26:21.89:22,0,24	0/1:20,0:19:16.02:19,0,16	1/1:25,0:25:2.49:23,2,0	0/1:27,0:27:7.57:8,0,25	0/1:40,0:39:65.36:343,0,65	0/1:36,0:34:51.84:56,0,52	1/1:10,0:10:6.89:28,7,0
chr10	5934747	.	G	GTC	5248.23	PASS	AB=0.910;AC=41;AF=0.732;AN=56;BaseQRankSum=1.249;DP=745;FS=11.193;HRun=0;HaplotypeScore=192.6584;InbreedingCoeff=0.2858;MQ=53.99;MQ0=15;MQRankSum=-0.078;QD=8.30;ReadPosRankSum=2.148;VQSLOD=3.2713;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:26:2.55:0,3,37	1/1:10,0:10:6.02:93,6,0	0/0:26,0:10:20.58:0,21,197	0/1:31,0:9:10.43:10,0,71	1/1:6,18:25:3.01:35,3,0	1/1:17,0:16:2.93:27,3,0	1/1:17,0:16:0.40:1,0,0	1/1:47,0:45:82.62:1041,83,0	0/1:23,0:28:21.82:141,0,22	1/1:10,17:28:19.84:622,20,0	0/1:3,14:17:12.66:125,0,13	1/1:11,23:34:9.03:114,9,0	1/1:15,17:31:7.81:288,8,0	1/1:16,28:44:8.90:75,9,0	1/1:33,0:34:8.81:276,9,0	0/1:23,0:24:38.80:77,0,39	0/0:19,0:19:39.09:0,39,453	1/1:4,12:16:15.05:234,15,0	1/1:25,0:24:16.56:172,17,0	1/1:32,0:32:5.56:191,6,0	0/0:10,13:22:2.44:0,2,35	0/1:26,0:25:5.77:51,0,6	0/0:5,13:18:2.55:0,3,36	1/1:8,17:25:3.01:46,3,0	1/1:12,0:27:2.75:136,3,0	1/1:15,27:42:47.61:991,48,0	1/1:13,24:38:23.99:330,24,0	1/1:1,6:10:12.04:169,12,0
chr10	5934749	.	C	CTCTG	5431.31	PASS	AB=0.925;AC=32;AF=0.571;AN=56;BaseQRankSum=-0.249;DP=751;FS=0.993;HRun=0;HaplotypeScore=203.8802;InbreedingCoeff=0.0907;MQ=54.54;MQ0=14;MQRankSum=0.190;QD=8.92;ReadPosRankSum=6.052;VQSLOD=3.9360;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:25:22.32:91,0,22	0/0:12,0:12:4.56:0,5,47	0/0:26,0:11:23.52:0,24,290	0/1:29,0:9:9.25:9,0,107	0/1:25,0:25:0.75:1,0,19	0/1:3,13:17:10.58:73,0,11	1/1:4,12:17:4.42:55,4,0	0/1:46,0:44:48.78:141,0,49	1/1:20,8:28:41.49:1000,41,0	0/1:28,0:28:59.95:60,0,65	0/1:17,0:17:14.56:15,0,39	0/1:34,0:34:3.42:3,0,56	0/1:32,0:31:49.06:49,0,110	0/0:42,0:42:17.36:0,17,134	1/1:8,27:37:24.98:691,25,0	1/1:6,19:25:25.25:357,25,0	0/0:21,0:21:42.13:0,42,741	1/1:14,0:14:16.28:78,16,0	1/1:7,19:27:49.98:1173,50,0	1/1:3,29:32:29.38:609,29,0	0/0:23,0:22:2.84:0,3,41	0/1:5,20:24:9.32:178,0,9	0/0:18,0:17:2.78:0,3,25	0/1:26,0:26:12.42:12,0,14	1/1:24,3:27:8.51:415,9,0	0/1:44,0:43:99:135,0,123	1/1:41,0:39:20.60:228,21,0	1/1:10,0:10:3.05:59,3,0
chr10	5934965	.	GCA	G	646.62	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=1.779;DP=853;FS=5.267;HRun=0;HaplotypeScore=127.9289;InbreedingCoeff=0.9700;MQ=65.79;MQ0=0;MQRankSum=-0.029;QD=26.94;ReadPosRankSum=-0.390;VQSLOD=4.3977;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:81.89:0,82,1410	0/0:9,0:9:27.09:0,27,456	0/0:40,1:36:78.15:0,78,1234	0/0:41,0:38:98.55:0,99,1573	0/0:34,0:34:93.32:0,93,1531	0/0:29,0:29:75.24:0,75,1238	0/0:15,0:15:45.15:0,45,751	0/0:56,1:57:99:0,103,2277	0/0:36,0:36:99:0,102,1674	0/0:31,0:31:78.27:0,78,1316	0/0:20,0:20:42.13:0,42,679	0/0:39,0:39:96.33:0,96,1610	0/0:34,0:34:93.29:0,93,1507	0/0:26,0:26:66.23:0,66,1114	0/0:35,0:35:90.31:0,90,1514	0/0:31,0:31:84.27:0,84,1388	1/1:2,22:24:32.19:741,32,0	0/0:20,1:21:12.56:0,13,764	0/0:21,0:21:54.18:0,54,892	0/0:32,0:32:81.28:0,81,1356	0/0:47,0:47:99:0,111,1858	0/0:33,0:33:81.28:0,81,1351	0/0:21,0:21:36.10:0,36,580	0/0:30,0:30:75.26:0,75,1258	0/0:30,0:30:87.30:0,87,1437	0/0:31,2:33:42.65:0,43,1258	0/0:34,0:34:90.31:0,90,1490	0/0:14,0:14:24.08:0,24,394
chr10	5935645	.	CCT	C	10161.33	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=16.382;DP=701;FS=5.392;HRun=0;HaplotypeScore=82.5329;InbreedingCoeff=0.9974;MQ=89.61;MQ0=1;MQRankSum=-2.794;QD=38.06;ReadPosRankSum=4.586;VQSLOD=6.9424;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:93.26:0,93,1637	1/1:1,9:10:24.08:352,24,0	0/0:34,0:34:96.31:0,96,1731	0/0:23,0:23:66.23:0,66,1184	1/1:1,34:35:87.29:1280,87,0	0/0:39,0:39:99:0,117,2159	0/0:16,0:16:48.16:0,48,899	0/0:28,0:28:72.24:0,72,1322	0/0:20,0:20:60.19:0,60,1092	1/1:3,21:23:60.16:841,60,0	1/1:2,20:22:57.19:839,57,0	1/1:0,25:25:66.18:948,66,0	1/1:2,24:26:69.23:1015,69,0	1/1:0,22:22:60.20:883,60,0	0/0:16,0:16:48.16:0,48,899	0/0:18,0:18:51.16:0,51,924	0/0:28,0:28:84.26:0,84,1482	1/1:0,14:14:39.13:574,39,0	0/0:29,0:29:87.28:0,87,1572	0/0:25,0:25:75.26:0,75,1387	1/1:1,26:27:72.24:1060,72,0	0/0:35,0:35:99:0,102,1831	1/1:2,25:27:69.23:1001,69,0	1/1:1,34:35:93.31:1369,93,0	0/0:28,0:28:84.27:0,84,1540	0/0:31,1:32:49.12:0,49,1563	0/0:26,0:26:78.25:0,78,1427	0/0:5,0:5:15.05:0,15,281
chr10	5936275	.	G	GCA	1995.05	PASS	AB=0.984;AC=23;AF=0.411;AN=56;BaseQRankSum=0.446;DP=715;FS=0.560;HRun=0;HaplotypeScore=139.8213;InbreedingCoeff=0.2016;MQ=62.11;MQ0=61;MQRankSum=-1.795;QD=5.78;ReadPosRankSum=-2.378;VQSLOD=2.7541;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:48.60:0,49,461	0/0:8,0:6:5.36:0,5,22	0/0:54,0:24:5.98:0,6,51	0/0:52,0:25:8.59:0,9,82	0/0:24,0:16:10.44:0,10,44	0/1:19,0:18:21.88:105,0,22	0/1:36,0:35:99:125,0,120	1/1:32,0:32:16.36:139,16,0	1/1:20,1:22:17.92:283,18,0	0/1:24,0:20:11.81:12,0,22	0/0:12,0:9:2.74:0,3,12	0/0:22,0:18:14.26:0,14,79	0/0:30,0:25:26.22:0,26,111	0/0:30,0:22:24.15:0,24,100	0/1:21,0:19:9.24:243,0,9	1/1:18,1:19:24.08:314,24,0	1/1:30,0:26:9.64:54,10,0	0/1:20,0:19:6.89:7,0,27	0/1:13,0:12:83.85:92,0,84	0/1:14,0:14:47.05:164,0,47	0/0:34,0:21:4.76:0,5,22	0/1:26,1:25:8.85:130,0,9	0/0:13,0:9:2.34:0,2,10	0/0:53,0:39:17.69:0,18,108	0/1:19,1:20:17.60:164,0,18	1/1:30,0:28:40.69:309,41,0	1/1:8,0:11:2.74:12,3,0	1/1:5,0:3:2.97:20,3,0
chr10	5936301	.	ACACAC	A	1347.55	PASS	AB=0.998;AC=18;AF=0.321;AN=56;BaseQRankSum=-1.768;DP=843;FS=0.000;HRun=0;HaplotypeScore=128.7570;InbreedingCoeff=-0.0726;MQ=45.80;MQ0=150;MQRankSum=1.055;QD=3.36;ReadPosRankSum=-5.069;VQSLOD=0.5876;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:70.72:0,71,1111	0/1:10,0:6:44.19:64,0,44	0/0:63,0:11:21.05:0,21,242	0/0:71,0:14:30.46:0,30,338	0/0:24,0:12:8.37:0,8,120	0/0:22,0:21:18.06:0,18,336	0/0:37,0:36:32.81:0,33,590	0/1:37,0:37:99:254,0,739	0/1:24,0:24:3.66:4,0,566	0/1:31,0:13:30.96:260,0,31	1/1:17,0:12:2.04:6,2,0	0/1:23,0:16:49.94:50,0,232	0/1:32,0:24:51.54:52,0,229	0/1:39,1:23:17.13:17,0,217	0/0:24,0:23:30.10:0,30,642	0/0:22,0:22:24.55:0,25,461	0/0:35,0:28:7.69:0,8,113	1/1:7,15:18:12.04:224,12,0	0/0:20,0:18:42.05:0,42,643	0/1:17,0:15:86.10:86,0,296	0/1:44,0:18:71.72:135,0,72	0/0:36,0:34:42.49:0,42,692	0/1:21,0:8:50.57:65,0,51	0/1:58,0:33:99:258,0,254	0/1:21,0:20:13.58:14,0,381	0/0:28,0:26:31.22:0,31,1140	0/0:14,0:13:18.05:0,18,311	1/1:4,0:2:2.97:20,3,0
chr10	5936303	.	ACAC	A	1858.41	PASS	AB=0.965;AC=23;AF=0.411;AN=56;BaseQRankSum=-2.133;DP=839;FS=0.000;HRun=0;HaplotypeScore=111.7724;InbreedingCoeff=0.2799;MQ=45.81;MQ0=149;MQRankSum=1.005;QD=4.42;ReadPosRankSum=-4.551;VQSLOD=0.7104;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:70.71:0,71,894	1/1:9,0:5:1.96:70,2,0	0/0:64,0:9:21.05:0,21,242	0/0:72,0:13:29.78:0,30,335	0/1:24,1:13:9.16:40,0,9	0/0:20,0:20:17.92:0,18,236	0/0:37,0:36:32.74:0,33,424	0/1:36,0:36:99:272,0,687	0/1:24,0:24:2.60:3,0,320	1/1:30,1:13:20.71:326,21,0	1/1:7,9:11:3.01:50,3,0	0/1:24,1:18:31.32:101,0,31	0/1:27,5:24:2.06:202,0,2	0/1:38,3:24:13.87:106,0,14	0/0:26,0:25:30.08:0,30,395	0/0:22,0:22:24.06:0,24,261	0/0:35,0:28:7.55:0,8,55	1/1:22,0:18:12.03:128,12,0	0/0:21,0:19:37.44:0,37,522	0/1:16,0:15:86.68:87,0,173	1/1:41,2:17:6.19:188,6,0	0/0:36,0:34:47.42:0,47,549	1/1:20,0:7:0.97:68,1,0	0/1:54,2:31:1.31:357,0,1	0/1:20,0:19:13.58:14,0,233	0/0:26,0:24:17.74:0,18,805	0/0:14,0:13:18.05:0,18,274	1/1:4,0:2:2.97:20,3,0
chr10	5936305	.	AC	A	3816.01	PASS	AB=0.924;AC=31;AF=0.554;AN=56;BaseQRankSum=-0.525;DP=839;FS=5.343;HRun=2;HaplotypeScore=92.9959;InbreedingCoeff=0.5556;MQ=46.13;MQ0=148;MQRankSum=0.767;QD=7.95;ReadPosRankSum=1.388;VQSLOD=1.1010;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:69.74:0,70,727	1/1:2,8:6:15.01:175,15,0	0/0:64,1:12:30.07:0,30,338	0/0:69,1:14:30.04:0,30,334	1/1:6,19:13:14.98:173,15,0	0/0:20,0:20:15.32:0,15,139	0/0:38,0:37:29.65:0,30,294	0/1:25,10:35:99:286,0,712	0/1:23,1:24:8.58:9,0,82	1/1:10,20:12:33.08:401,33,0	1/1:14,1:10:2.94:18,3,0	1/1:6,21:20:31.86:373,32,0	1/1:12,20:24:42.03:503,42,0	1/1:14,25:22:33.04:406,33,0	0/0:26,0:25:23.64:0,24,157	0/0:22,0:22:17.24:0,17,64	1/1:30,5:28:1.54:11,2,0	1/1:20,2:18:11.72:86,12,0	0/0:22,0:20:14.08:0,14,432	0/1:16,0:15:62.50:83,0,63	1/1:17,27:18:24.01:286,24,0	0/0:35,1:34:47.07:0,47,382	1/1:7,12:6:12.04:154,12,0	1/1:17,39:31:60.06:730,60,0	0/1:20,1:20:15.93:16,0,92	0/1:24,2:24:85.98:86,0,613	0/0:13,0:12:21.05:0,21,265	1/1:2,2:2:2.97:20,3,0
chr10	5936306	.	C	CACCA	3837.18	PASS	AB=0.695;AC=19;AF=0.339;AN=56;BaseQRankSum=-4.001;DP=851;FS=0.000;HRun=0;HaplotypeScore=115.7357;InbreedingCoeff=0.0128;MQ=46.67;MQ0=148;MQRankSum=1.600;QD=10.63;ReadPosRankSum=2.146;VQSLOD=2.5848;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:50:17.34:0,17,509	0/1:9,0:5:11.96:12,0,33	0/0:65,0:12:29.67:0,30,279	0/0:69,0:14:23.58:0,24,208	0/0:22,0:15:11.45:0,11,91	0/1:5,12:19:81.35:244,0,81	0/1:12,21:42:99:228,0,183	0/0:33,0:35:7.42:0,7,475	1/1:4,15:24:31.01:663,31,0	0/1:22,0:13:11.01:11,0,56	0/0:12,0:10:3:0,3,25	0/0:22,0:20:24.07:0,24,188	0/0:25,0:23:29.46:0,29,234	0/0:29,0:21:27.66:0,28,213	0/1:5,20:25:34.80:582,0,35	1/1:3,19:23:24.14:613,24,0	1/1:7,0:28:3.74:58,4,0	0/1:18,0:17:6.28:6,0,65	0/1:15,6:21:47.72:320,0,48	0/1:5,10:15:37.64:404,0,38	0/0:34,0:20:4.42:0,4,45	0/1:13,21:34:99:327,0,167	0/0:12,0:6:2.62:0,3,21	0/0:41,0:30:19.32:0,19,237	0/1:4,15:23:13.22:267,0,13	0/1:20,0:25:81.98:82,0,326	0/0:12,0:13:18.23:0,18,181	1/1:4,0:2:2.97:20,3,0
chr10	5936764	.	T	TA	7667.14	PASS	AB=0.933;AC=21;AF=0.375;AN=56;BaseQRankSum=-9.440;DP=691;FS=0.986;HRun=4;HaplotypeScore=117.6865;InbreedingCoeff=0.9458;MQ=81.80;MQ0=0;MQRankSum=-4.548;QD=27.98;ReadPosRankSum=2.000;VQSLOD=3.6978;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,38:43:87.18:1241,87,0	0/0:12,0:12:30.49:0,30,168	0/0:26,0:26:72.16:0,72,785	0/0:26,0:26:69.18:0,69,765	0/0:35,0:35:60.99:0,61,388	1/1:3,26:29:72.21:898,72,0	1/1:4,18:22:42.13:532,42,0	0/0:33,0:33:47.76:0,48,350	1/1:2,27:29:66.21:834,66,0	0/0:27,0:27:40.64:0,41,302	0/0:24,0:24:63.21:0,63,343	0/0:18,0:18:40.50:0,41,199	0/0:28,0:28:62.74:0,63,332	0/0:20,0:20:47.52:0,48,240	1/1:1,22:24:69.52:852,70,0	1/1:1,15:16:42.13:532,42,0	0/0:41,0:41:99:0,117,1314	0/0:18,0:18:48.92:0,49,264	1/1:8,20:28:35.07:752,35,0	1/1:6,20:26:60.15:744,60,0	0/0:27,0:27:65.53:0,66,346	1/1:5,14:19:29.14:517,29,0	0/0:26,0:26:40.74:0,41,310	0/1:13,1:14:3.73:4,0,129	1/1:1,23:24:60.19:761,60,0	0/0:18,0:18:48.20:0,48,242	0/0:28,0:28:69.29:0,69,376	0/0:10,0:10:28.83:0,29,152
chr10	5937941	.	A	AAC	5728.91	PASS	AB=0.545;AC=39;AF=0.696;AN=56;BaseQRankSum=6.034;DP=571;FS=32.963;HRun=0;HaplotypeScore=166.9686;InbreedingCoeff=0.7702;MQ=46.52;MQ0=20;MQRankSum=0.369;QD=14.84;ReadPosRankSum=0.992;VQSLOD=2.9125;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:20:4.45:14,4,0	1/1:7,6:13:30.10:435,30,0	0/0:37,0:7:15.03:0,15,156	0/0:28,0:8:11.99:0,12,119	1/1:27,15:41:65.99:990,66,0	1/1:19,0:23:17.99:206,18,0	0/0:6,0:13:0.65:0,1,2	0/0:28,0:27:38.55:0,39,536	1/1:16,0:14:17.24:156,17,0	1/1:18,9:26:68.95:1019,69,0	0/1:3,15:18:10.56:58,0,11	1/1:12,6:17:32.86:436,33,0	1/1:16,4:20:39.05:533,39,0	1/1:9,4:13:15.05:234,15,0	1/1:18,0:19:8.93:69,9,0	1/1:16,0:22:25.01:186,25,0	0/0:15,0:15:26.94:0,27,259	1/1:9,0:8:15.01:211,15,0	1/1:12,0:10:7.03:31,7,0	1/1:20,0:22:3.48:31,3,0	1/1:28,2:28:33.11:502,33,0	1/1:3,0:5:1.25:3,1,0	1/1:9,5:14:23.62:309,24,0	1/1:7,3:10:15.05:222,15,0	1/1:24,0:24:8.43:84,8,0	0/0:21,0:21:36.72:0,37,372	0/0:26,0:25:32.99:0,33,553	0/0:16,0:15:30.64:0,31,325
chr10	5937968	.	C	CACAT	4051.99	PASS	AB=0.895;AC=22;AF=0.393;AN=56;BaseQRankSum=4.447;DP=625;FS=7.315;HRun=0;HaplotypeScore=179.2156;InbreedingCoeff=0.6143;MQ=44.06;MQ0=36;MQRankSum=2.737;QD=14.47;ReadPosRankSum=4.256;VQSLOD=2.7487;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:26:9.98:10,0,32	1/1:6,3:11:17.85:290,18,0	0/0:30,0:4:8.87:0,9,76	0/0:32,0:7:11.65:0,12,85	1/1:34,10:42:17.13:796,17,0	0/0:28,0:27:34.32:0,34,345	0/0:17,0:15:11.97:0,12,157	0/0:24,0:21:49.33:0,49,381	0/0:20,0:17:15.50:0,16,295	1/1:23,3:24:48.74:699,49,0	0/1:19,2:21:7.19:146,0,7	1/1:11,6:18:7.06:304,7,0	1/1:9,8:19:35.43:568,35,0	1/1:5,9:14:5.99:98,6,0	0/0:19,0:18:11.96:0,12,103	0/0:18,0:18:14:0,14,306	0/1:15,0:14:80.54:81,0,82	1/1:5,5:9:14.37:179,14,0	0/0:21,0:19:47.29:0,47,323	0/0:29,0:29:19.87:0,20,347	0/1:16,11:29:38.68:259,0,39	0/0:8,0:8:4.26:0,4,59	1/1:11,5:15:6.71:196,7,0	1/1:22,0:21:11.04:426,11,0	0/0:26,0:24:24.70:0,25,249	0/0:26,0:25:10.88:0,11,385	0/0:28,0:25:48.45:0,48,450	0/0:17,0:16:27.50:0,28,257
chr10	5937970	.	C	CAT	2052.67	PASS	AB=0.984;AC=19;AF=0.339;AN=56;BaseQRankSum=7.850;DP=619;FS=9.303;HRun=0;HaplotypeScore=171.2694;InbreedingCoeff=0.2468;MQ=44.36;MQ0=32;MQRankSum=2.192;QD=6.58;ReadPosRankSum=6.441;VQSLOD=1.9285;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:26:5.40:5,0,33	1/1:11,0:11:4.38:115,4,0	0/0:29,0:5:11.83:0,12,95	0/0:31,0:6:14.91:0,15,111	0/1:44,2:43:25.46:595,0,25	0/0:27,0:26:35.37:0,35,330	0/0:18,0:16:11.96:0,12,133	0/0:23,0:20:55.76:0,56,439	0/0:20,0:17:11.31:0,11,218	1/1:26,0:24:30.25:375,30,0	0/1:21,0:21:36.81:37,0,97	0/1:20,0:18:0.55:138,0,1	1/1:19,0:19:35.66:336,36,0	1/1:14,0:14:8.63:76,9,0	0/0:18,0:17:11.67:0,12,103	0/0:18,0:18:30.49:0,30,335	0/0:14,0:13:20.36:0,20,130	1/1:9,1:9:2.37:67,2,0	0/0:20,0:19:48.47:0,48,329	0/0:27,0:28:33.45:0,33,316	0/1:33,0:30:12.09:167,0,12	0/0:8,0:8:4.26:0,4,49	0/1:15,1:16:38.41:127,0,38	0/1:21,0:20:63.98:149,0,64	0/0:26,0:24:23.86:0,24,235	0/0:26,0:25:20.24:0,20,427	0/1:28,0:25:32:32,0,357	0/1:17,0:16:8.38:8,0,200
chr10	5938900	.	C	CA	8119.19	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=19.052;DP=767;FS=14.192;HRun=1;HaplotypeScore=130.5135;InbreedingCoeff=0.9730;MQ=87.96;MQ0=0;MQRankSum=-12.210;QD=35.77;ReadPosRankSum=-0.048;VQSLOD=2.8632;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,132,1710	0/0:16,0:16:42.14:0,42,545	0/0:37,0:37:96.26:0,96,1175	0/0:23,0:23:60.08:0,60,720	0/0:35,0:35:99:0,105,1340	1/1:0,18:18:45.15:615,45,0	1/1:2,25:27:72.24:985,72,0	0/0:24,0:24:66.20:0,66,832	1/1:0,27:27:81.27:1099,81,0	0/0:40,0:40:99:0,114,1480	0/0:24,0:24:69.11:0,69,829	0/0:36,0:36:99:0,105,1349	0/0:34,0:34:99:0,99,1284	0/0:41,0:41:99:0,123,1567	1/1:0,24:24:63.21:860,63,0	1/1:2,22:24:42.68:747,43,0	0/0:33,0:33:96.29:0,96,1229	0/0:14,0:14:42.14:0,42,545	1/1:2,25:27:77.66:942,78,0	1/1:1,32:33:87.24:1156,87,0	0/0:41,0:41:99:0,114,1478	1/1:0,24:24:60.20:825,60,0	0/0:23,0:23:63.20:0,63,818	0/0:27,0:27:81.26:0,81,1051	1/1:0,23:23:66.22:889,66,0	0/0:24,0:24:69.22:0,69,895	0/0:22,0:22:63.18:0,63,799	0/0:1,0:1:3.01:0,3,39
chr10	5940079	.	T	TC	23658.04	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-14.225;DP=705;FS=2.718;HRun=1;HaplotypeScore=62.3185;InbreedingCoeff=0.9994;MQ=74.50;MQ0=0;MQRankSum=-5.266;QD=40.44;ReadPosRankSum=4.737;VQSLOD=5.3377;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:70,0:70:99:0,207,2549	1/1:0,11:11:30.10:449,30,0	0/0:29,0:27:75.19:0,75,909	0/0:21,0:20:57.18:0,57,730	1/1:1,24:25:60.20:899,60,0	1/1:1,32:33:90.30:1348,90,0	1/1:1,21:22:57.19:854,57,0	1/1:2,28:30:84.28:1256,84,0	1/1:0,27:27:78.26:1169,78,0	1/1:0,27:26:78.25:1149,78,0	1/1:1,18:19:51.17:764,51,0	1/1:0,16:16:45.15:674,45,0	1/1:0,22:22:63.21:944,63,0	1/1:1,26:27:69.23:1033,69,0	1/1:1,20:21:51.17:764,51,0	1/1:0,14:14:42.14:630,42,0	1/1:1,31:32:78.26:1169,78,0	1/1:0,29:29:78.26:1168,78,0	1/1:0,14:15:39.13:576,39,0	1/1:1,28:29:81.27:1206,81,0	1/1:4,24:28:69.23:1033,69,0	1/1:1,29:30:81.27:1214,81,0	1/1:0,18:18:54.18:809,54,0	1/1:1,31:32:81.27:1213,81,0	1/1:0,18:18:54.18:809,54,0	1/1:2,22:24:69.22:1004,69,0	1/1:1,26:27:75.25:1118,75,0	1/1:0,9:9:27.09:404,27,0
chr10	5941101	.	GCTGT	G	5846.94	PASS	AB=0.532;AC=9;AF=0.161;AN=56;BaseQRankSum=13.204;DP=738;FS=9.752;HRun=0;HaplotypeScore=120.4423;InbreedingCoeff=0.8566;MQ=81.92;MQ0=0;MQRankSum=-7.543;QD=48.32;ReadPosRankSum=-0.381;VQSLOD=5.4815;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,160,4381	0/0:7,0:7:18.06:0,18,504	0/0:25,0:25:75.26:0,75,1995	0/0:27,0:27:80.94:0,81,1988	0/0:11,0:11:33.11:0,33,918	0/0:30,0:30:90.29:0,90,2410	0/0:36,0:36:99:0,105,2852	1/1:0,36:36:99:1957,108,0	0/0:34,0:34:99:0,102,2734	0/0:21,0:21:60.21:0,60,1667	0/0:8,0:8:24.07:0,24,584	0/0:34,0:34:99:0,99,2677	0/0:36,0:36:99:0,105,2841	0/0:31,0:31:90.31:0,90,2435	0/0:36,0:36:99:0,108,2943	0/0:42,0:42:99:0,126,3457	1/1:1,33:34:75.26:1497,75,0	0/0:22,0:22:63.19:0,63,1624	0/0:24,0:24:72.25:0,72,1869	0/0:18,0:18:51.18:0,51,1360	0/0:46,0:46:99:0,138,3540	0/0:22,0:22:66.23:0,66,1793	0/0:10,0:10:30.10:0,30,828	0/0:27,0:26:78.25:0,78,2085	0/0:15,0:15:42.14:0,42,1175	0/1:3,22:25:99:1243,0,176	1/1:1,20:21:48.16:910,48,0	1/1:1,4:5:12.04:240,12,0
chr10	5942751	.	C	CT	4850.88	PASS	AB=0.960;AC=39;AF=0.696;AN=56;BaseQRankSum=-4.804;DP=558;FS=0.413;HRun=9;HaplotypeScore=87.2203;InbreedingCoeff=0.8077;MQ=57.82;MQ0=9;MQRankSum=1.463;QD=14.79;ReadPosRankSum=-1.673;VQSLOD=4.6935;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:48.30:0,48,528	1/1:7,0:7:9.65:123,10,0	0/0:34,0:9:1.33:0,1,68	0/0:29,0:11:9.35:0,9,93	1/1:29,1:30:38.58:584,39,0	1/1:10,0:10:14.28:144,14,0	1/1:7,1:8:17.99:173,18,0	0/0:35,0:34:66.34:0,66,575	1/1:16,3:17:44.36:386,44,0	1/1:26,0:25:42.51:348,43,0	1/1:25,2:27:41.44:451,41,0	1/1:8,1:9:15.57:159,16,0	1/1:14,2:16:16.59:124,17,0	1/1:16,1:17:15.03:154,15,0	1/1:18,0:18:24.47:255,24,0	1/1:9,2:11:7.35:154,7,0	0/0:27,0:27:34.12:0,34,273	1/1:13,4:17:13.66:269,14,0	0/1:23,1:24:6.77:182,0,7	1/1:9,18:27:48.30:456,48,0	1/1:3,1:3:6.02:64,6,0	1/1:7,0:7:14.85:151,15,0	1/1:15,0:15:11.58:126,12,0	1/1:7,2:8:6.01:58,6,0	1/1:25,2:27:52.87:490,53,0	0/0:32,0:32:23.78:0,24,657	0/0:23,0:23:47.97:0,48,414	0/0:16,0:16:20.97:0,21,180
chr10	5942759	.	TTC	T	2009.80	PASS	AB=0.993;AC=36;AF=0.643;AN=56;BaseQRankSum=0.895;DP=536;FS=14.113;HRun=0;HaplotypeScore=96.7612;InbreedingCoeff=0.0848;MQ=54.70;MQ0=10;MQRankSum=-0.023;QD=4.88;ReadPosRankSum=-0.080;VQSLOD=1.9165;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:34,0:34:9.04:9,0,273	1/1:7,0:7:14.43:77,14,0	0/1:40,0:9:1.53:2,0,89	0/0:34,0:11:10.83:0,11,100	1/1:28,2:30:14.31:233,14,0	1/1:8,0:8:12.19:55,12,0	0/1:6,0:6:8.07:31,0,8	0/0:31,0:30:3.72:0,4,267	0/1:17,1:16:18.58:91,0,19	1/1:22,1:22:33.24:250,33,0	1/1:26,1:27:51.68:315,52,0	1/1:7,0:7:12.16:88,12,0	0/1:15,0:15:0.36:63,0,0	1/1:17,0:17:9.37:76,9,0	0/1:13,0:13:30.41:40,0,30	0/1:10,0:10:14.97:15,0,34	0/0:29,0:29:4.83:0,5,342	1/1:18,0:18:16.57:196,17,0	0/1:20,0:20:58.12:58,0,79	0/1:26,1:27:8.31:127,0,8	1/1:5,0:4:5.96:44,6,0	1/1:8,0:8:9.86:101,10,0	1/1:15,0:15:9.47:64,9,0	1/1:6,0:5:5.87:39,6,0	0/1:26,0:26:2.70:180,0,3	0/0:30,0:30:35.03:0,35,287	0/1:23,0:23:12.27:12,0,77	0/1:9,0:9:10.45:10,0,54
chr10	5942760	.	TC	T	3227.04	PASS	AB=0.974;AC=39;AF=0.696;AN=56;BaseQRankSum=-1.430;DP=532;FS=11.888;HRun=1;HaplotypeScore=84.7130;InbreedingCoeff=0.6543;MQ=54.60;MQ0=10;MQRankSum=1.540;QD=9.75;ReadPosRankSum=-0.351;VQSLOD=0.0323;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:30.27:0,30,356	1/1:5,2:7:17.34:142,17,0	0/0:40,1:10:1.58:0,2,85	0/0:33,1:11:12.89:0,13,79	1/1:7,23:30:30.09:350,30,0	1/1:8,0:8:18.94:107,19,0	1/1:6,0:6:9.39:65,9,0	0/0:31,0:30:27.23:0,27,392	1/1:17,1:16:16.39:142,16,0	1/1:5,18:22:41.97:347,42,0	1/1:20,5:25:53.60:385,54,0	1/1:7,0:7:14.70:111,15,0	1/1:5,10:15:2.30:109,2,0	1/1:3,13:16:9.46:109,9,0	1/1:13,0:13:19.60:94,20,0	0/1:9,0:9:0.59:58,0,1	0/1:28,1:29:9.08:9,0,253	1/1:16,2:18:31.46:351,31,0	0/1:20,1:21:41.93:114,0,42	1/1:27,0:27:38.41:238,38,0	1/1:2,2:3:6.01:64,6,0	1/1:7,1:8:17.83:126,18,0	1/1:2,13:15:9.98:90,10,0	1/1:6,0:5:5.76:68,6,0	1/1:23,3:26:27.24:339,27,0	0/0:30,0:30:52.75:0,53,485	0/0:23,0:23:26.28:0,26,217	0/0:9,0:9:12.39:0,12,94
chr10	5942761	.	CTT	C	2066.04	PASS	AB=0.971;AC=30;AF=0.536;AN=56;BaseQRankSum=-2.080;DP=542;FS=0.478;HRun=17;HaplotypeScore=98.1152;InbreedingCoeff=0.2097;MQ=57.84;MQ0=11;MQRankSum=0.566;QD=5.31;ReadPosRankSum=2.257;VQSLOD=-0.2423;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:19,13:32:14.14:156,0,14	0/1:7,0:7:7.28:38,0,7	0/1:49,0:12:10.48:10,0,34	0/0:38,0:13:19.54:0,20,115	0/1:30,0:30:18.16:78,0,18	0/0:8,0:8:1.80:0,2,28	0/0:7,0:7:13.17:0,13,85	1/1:14,15:28:37.14:293,37,0	0/1:18,0:16:12.65:13,0,136	0/1:23,0:22:18.55:140,0,19	1/1:24,0:24:16.25:169,16,0	1/1:7,0:7:7.25:41,7,0	1/1:15,0:15:10.95:69,11,0	1/1:16,0:16:5.73:73,6,0	0/0:13,0:13:21.08:0,21,188	0/0:9,0:9:14.40:0,14,131	0/0:16,0:30:37.89:0,38,358	0/1:18,0:18:62.14:100,0,62	0/0:21,0:21:4.46:0,4,240	0/0:27,0:27:10.70:0,11,182	1/1:4,0:3:5.95:43,6,0	0/1:8,0:8:13.56:37,0,14	0/1:15,0:15:2.30:36,0,2	1/1:6,0:5:5.81:35,6,0	0/1:25,0:26:41.64:42,0,151	1/1:12,17:29:51.78:406,52,0	1/1:4,19:23:44.52:354,45,0	1/1:3,6:9:14.50:118,14,0
chr10	5944772	.	TTC	T	275.45	PASS	AB=0.951;AC=11;AF=0.196;AN=56;BaseQRankSum=3.159;DP=491;FS=46.709;HRun=0;HaplotypeScore=87.9761;InbreedingCoeff=-0.0650;MQ=72.40;MQ0=3;MQRankSum=0.153;QD=1.54;ReadPosRankSum=1.678;VQSLOD=-0.2064;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:35.43:0,35,379	0/0:10,0:10:0.91:0,1,76	0/0:37,0:15:8.66:0,9,120	0/0:20,0:11:9.48:0,9,176	0/1:26,0:26:63.88:64,0,85	0/1:20,1:21:13.33:13,0,191	0/0:7,0:7:17.83:0,18,168	0/0:37,0:37:57.92:0,58,360	0/0:14,0:14:25.09:0,25,192	0/1:23,1:24:38.69:39,0,163	0/1:17,1:18:10.31:10,0,104	1/1:10,1:11:14.85:89,15,0	0/1:23,1:24:74.18:74,0,104	0/1:22,3:25:46.99:82,0,47	0/0:12,0:12:28.86:0,29,178	0/1:10,1:11:15.09:15,0,86	0/0:9,0:9:14.52:0,15,72	0/1:6,0:6:8.32:8,0,16	0/0:15,0:15:40.84:0,41,314	0/0:18,0:18:48.98:0,49,339	0/0:12,0:12:6.34:0,6,110	0/0:14,0:14:23.10:0,23,188	0/1:12,1:13:27.49:27,0,75	0/0:5,0:5:1.14:0,1,21	0/0:22,0:22:26.29:0,26,262	0/0:22,0:22:37.12:0,37,197	0/0:30,0:30:32.64:0,33,174	0/0:16,0:16:26.60:0,27,136
chr10	5944774	.	CTT	C	2808.67	PASS	AB=0.635;AC=35;AF=0.625;AN=56;BaseQRankSum=3.170;DP=500;FS=1.463;HRun=16;HaplotypeScore=80.1842;InbreedingCoeff=0.5297;MQ=72.07;MQ0=4;MQRankSum=-0.955;QD=8.16;ReadPosRankSum=2.937;VQSLOD=1.0846;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:16:46.58:0,47,462	1/1:1,7:8:8.84:117,9,0	0/0:38,1:15:12.25:0,12,88	0/0:21,0:11:4.84:0,5,98	1/1:6,21:28:34.25:431,34,0	0/1:8,1:20:16.76:17,0,93	0/0:5,0:7:11.40:0,11,126	1/1:12,0:38:54.15:248,54,0	0/0:12,1:16:0.26:0,0,102	1/1:8,15:25:47.12:364,47,0	0/1:9,9:19:4.10:144,0,4	1/1:2,9:11:20.96:172,21,0	1/1:8,17:25:29.72:240,30,0	1/1:7,16:24:32.31:259,32,0	0/1:3,1:11:2.50:3,0,60	0/1:5,1:11:24.33:24,0,26	1/1:3,0:8:13.70:58,14,0	1/1:1,4:6:14.72:112,15,0	0/0:5,1:15:3.49:0,3,117	0/0:8,0:21:21.15:0,21,177	1/1:5,4:10:2.87:25,3,0	0/1:7,0:14:2.13:2,0,39	1/1:5,8:13:12.67:143,13,0	1/1:1,4:5:8.98:75,9,0	0/0:6,1:21:3.52:0,4,122	1/1:3,0:21:46.52:198,47,0	1/1:6,0:31:49.12:209,49,0	1/1:3,0:16:35.65:152,36,0
chr10	5945492	.	G	GT	4299.71	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=13.730;DP=627;FS=1.694;HRun=6;HaplotypeScore=68.7818;InbreedingCoeff=0.9993;MQ=65.71;MQ0=0;MQRankSum=0.377;QD=31.16;ReadPosRankSum=-1.680;VQSLOD=4.8213;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:81.18:0,81,826	0/0:10,0:10:30.07:0,30,306	0/0:16,0:16:45.09:0,45,452	0/0:18,0:18:43.15:0,43,402	0/0:22,0:22:54.09:0,54,542	0/0:31,0:30:90.19:0,90,910	0/0:20,0:20:51.09:0,51,508	1/1:5,33:38:99:1187,99,0	0/0:14,0:14:39.08:0,39,392	0/0:22,0:21:60.12:0,60,606	0/0:24,0:24:69.15:0,69,704	0/0:15,0:15:45.09:0,45,452	0/0:24,0:24:69.13:0,69,696	0/0:19,0:19:48.09:0,48,483	0/0:18,0:18:48.09:0,48,483	0/0:22,0:22:66.14:0,66,667	1/1:2,23:25:66.21:822,66,0	0/0:17,0:17:44.97:0,45,444	0/0:16,0:16:45.04:0,45,438	0/0:47,0:47:99:0,120,1210	0/0:15,0:15:45.09:0,45,453	0/0:24,0:24:69.15:0,69,704	0/0:27,0:27:78.18:0,78,796	0/0:15,0:15:33.07:0,33,336	0/0:24,0:24:66.14:0,66,666	1/1:3,25:28:47.61:894,48,0	1/1:4,29:33:87.28:1094,87,0	1/1:0,14:14:24.08:302,24,0
chr10	5947318	.	TTGTGTGTGTGTGTGTG	T	5291.74	PASS	AB=0.819;AC=23;AF=0.426;AN=54;BaseQRankSum=6.213;DP=634;FS=26.644;HRun=0;HaplotypeScore=257.0252;InbreedingCoeff=0.6101;MQ=68.17;MQ0=16;MQRankSum=-4.828;QD=17.24;ReadPosRankSum=-0.436;VQSLOD=2.3921;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:24:3.01:112,3,0	./.	0/0:28,0:19:6.02:0,6,109	0/0:35,0:28:9.03:0,9,137	1/1:12,5:17:8.98:214,9,0	0/0:18,0:26:30.10:0,30,1075	0/0:20,0:21:23.27:0,23,632	0/0:30,0:29:8.20:0,8,66	0/0:17,0:18:30.09:0,30,1037	1/1:17,9:26:24.06:794,24,0	1/1:19,8:27:11.91:191,12,0	0/1:22,5:27:15.57:252,0,16	1/1:15,8:24:21.07:898,21,0	1/1:17,7:24:21.06:917,21,0	0/0:22,0:24:40.95:0,41,1448	0/0:14,0:20:33.11:0,33,1074	1/1:18,4:24:9.03:354,9,0	1/1:11,1:11:3.01:131,3,0	0/0:18,0:19:21.06:0,21,438	0/0:21,0:31:45.14:0,45,1256	0/0:25,0:23:3.01:0,3,133	0/0:5,0:12:15.05:0,15,472	1/1:10,9:19:14.81:655,15,0	1/1:22,6:28:9.03:217,9,0	0/0:20,0:21:18.06:0,18,720	0/1:19,1:27:99:294,0,241	0/1:20,1:24:22.14:263,0,22	0/0:7,0:7:5.23:0,5,49
chr10	5947921	.	TC	T	19357.56	PASS	AB=0.523;AC=49;AF=0.875;AN=56;BaseQRankSum=-3.206;DP=630;FS=10.065;HRun=2;HaplotypeScore=67.9535;InbreedingCoeff=0.8799;MQ=64.37;MQ0=0;MQRankSum=-1.373;QD=35.26;ReadPosRankSum=4.570;VQSLOD=4.8667;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:2,21:23:3.80:656,0,4	1/1:0,10:10:30.10:389,30,0	0/0:25,0:21:59.86:0,60,835	0/0:24,0:24:54.02:0,54,744	1/1:0,23:23:66.18:839,66,0	1/1:0,35:35:99:1324,102,0	1/1:0,12:12:36.12:467,36,0	1/1:2,28:30:81.25:1040,81,0	1/1:1,15:16:39.13:506,39,0	1/1:0,37:37:99:1415,111,0	1/1:0,24:24:69.22:896,69,0	1/1:0,18:18:48.16:623,48,0	1/1:1,21:22:51.17:662,51,0	1/1:0,23:23:57.19:740,57,0	1/1:1,29:30:81.26:1052,81,0	1/1:0,25:25:75.24:974,75,0	0/0:32,0:32:96.30:0,96,1392	1/1:2,13:15:33.58:429,34,0	1/1:0,15:15:45.11:553,45,0	1/1:0,24:24:69.19:873,69,0	1/1:0,27:27:72.23:935,72,0	1/1:0,21:21:57.18:736,57,0	1/1:0,23:23:62.86:818,63,0	1/1:0,21:21:63.20:818,63,0	1/1:0,21:21:60.20:779,60,0	1/1:0,23:23:69.21:881,69,0	1/1:1,21:22:48.16:623,48,0	1/1:0,9:9:27.03:330,27,0
chr10	5948231	.	AT	A	742.40	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.569;DP=638;FS=0.000;HRun=6;HaplotypeScore=60.4425;InbreedingCoeff=0.9945;MQ=62.47;MQ0=0;MQRankSum=-2.826;QD=25.60;ReadPosRankSum=1.061;VQSLOD=3.5969;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:72.15:0,72,908	0/0:14,0:14:36.10:0,36,454	0/0:15,0:13:20.60:0,21,446	0/0:13,0:12:33.11:0,33,434	0/0:47,0:47:99:0,135,1775	0/0:22,0:22:66.20:0,66,853	0/0:16,0:16:45.06:0,45,553	0/0:28,0:27:75.24:0,75,974	0/0:18,0:18:45.15:0,45,592	0/0:28,0:28:84.27:0,84,1105	0/0:25,0:25:66.21:0,66,868	0/0:11,0:11:30.10:0,30,395	0/0:17,0:17:48.16:0,48,631	0/0:15,0:15:42.14:0,42,552	0/0:16,0:16:48.16:0,48,632	0/0:30,0:29:84.27:0,84,1105	1/1:2,27:29:78.20:837,78,0	0/0:21,0:21:60.17:0,60,764	0/0:16,0:16:39.10:0,39,482	0/0:24,0:24:66.21:0,66,858	0/0:21,0:21:54.17:0,54,704	0/0:23,0:23:66.20:0,66,855	0/0:25,0:25:75.23:0,75,960	0/0:25,0:25:75.24:0,75,987	0/0:25,0:25:69.22:0,69,895	0/0:34,0:34:99:0,102,1342	0/0:33,0:32:96.31:0,96,1263	0/0:21,0:21:54.18:0,54,711
chr10	5948383	.	C	CT	1416.30	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-6.798;DP=588;FS=2.188;HRun=2;HaplotypeScore=67.5250;InbreedingCoeff=0.9750;MQ=66.02;MQ0=0;MQRankSum=-1.893;QD=38.28;ReadPosRankSum=1.070;VQSLOD=4.3488;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:1,36:37:99:1511,105,0	0/0:9,0:9:24.07:0,24,298	0/0:28,0:26:72.20:0,72,865	0/0:22,0:22:62.24:0,62,737	0/0:28,0:28:78.23:0,78,954	0/0:17,0:17:51.16:0,51,631	0/0:13,0:13:39.12:0,39,483	0/0:40,0:40:99:0,117,1439	0/0:17,0:17:48.15:0,48,595	0/0:26,0:26:78.25:0,78,967	0/0:19,0:19:54.17:0,54,669	0/0:24,0:24:69.22:0,69,853	0/0:14,0:14:36.11:0,36,446	0/0:14,0:14:42.13:0,42,521	0/0:20,0:20:57.18:0,57,706	0/0:24,0:24:72.23:0,72,890	0/0:14,0:14:36.09:0,36,432	0/0:12,0:12:15.20:0,15,320	0/0:17,0:17:51.16:0,51,632	0/0:17,0:17:51.16:0,51,631	0/0:21,0:21:63.20:0,63,781	0/0:26,0:26:78.25:0,78,967	0/0:16,0:16:45.14:0,45,557	0/0:19,0:19:57.18:0,57,707	0/0:26,0:26:78.25:0,78,967	0/0:26,0:26:78.24:0,78,957	0/0:34,0:34:99:0,102,1233	0/0:8,0:8:18.06:0,18,223
chr10	5948563	.	A	AATCTATCT	16795.75	PASS	AC=52;AF=1.000;AN=52;DP=603;FS=0.000;HRun=0;HaplotypeScore=172.0823;InbreedingCoeff=-0.0225;MQ=63.60;MQ0=2;QD=29.99;VQSLOD=4.4953;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:29:20.92:199,21,0	1/1:5,2:7:15.03:330,15,0	./.	./.	1/1:20,14:35:2.97:118,3,0	1/1:15,3:18:30.10:1024,30,0	1/1:16,0:15:9.01:187,9,0	1/1:44,0:44:30.07:484,30,0	1/1:6,11:17:15.05:611,15,0	1/1:22,1:22:35.98:873,36,0	1/1:18,0:19:15.02:200,15,0	1/1:20,3:24:39.10:1187,39,0	1/1:18,1:21:23.92:617,24,0	1/1:16,4:20:39.12:1222,39,0	1/1:9,18:28:24.08:893,24,0	1/1:10,7:18:39.12:1365,39,0	1/1:11,0:10:11.99:116,12,0	1/1:8,1:8:12.01:222,12,0	1/1:13,0:12:15.93:273,16,0	1/1:19,3:22:17.97:526,18,0	1/1:14,0:15:9.01:151,9,0	1/1:23,0:22:27.05:506,27,0	1/1:24,3:27:27.09:728,27,0	1/1:19,0:19:8.98:73,9,0	1/1:22,3:26:39.08:1083,39,0	1/1:27,7:35:57.18:1866,57,0	1/1:26,6:32:51.17:1695,51,0	1/1:6,3:9:6.02:245,6,0
chr10	5948633	.	CATCT	C	7561.79	PASS	AB=0.897;AC=43;AF=0.860;AN=50;BaseQRankSum=1.008;DP=652;FS=2.532;HRun=0;HaplotypeScore=138.9140;InbreedingCoeff=0.4995;MQ=50.58;MQ0=22;MQRankSum=3.113;QD=13.62;ReadPosRankSum=1.592;VQSLOD=4.6392;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,1:27:33.04:0,33,607	1/1:2,8:10:21.07:324,21,0	./.	./.	1/1:14,6:20:24.07:351,24,0	1/1:9,9:18:24.08:371,24,0	1/1:12,8:17:15.05:232,15,0	0/1:41,0:37:26.94:27,0,134	0/0:15,0:15:30.07:0,30,604	1/1:21,12:33:36.08:488,36,0	1/1:11,8:19:14.80:205,15,0	1/1:12,8:20:15.05:232,15,0	1/1:14,14:28:33.11:510,33,0	1/1:15,16:31:27.09:417,27,0	1/1:20,7:27:27.09:416,27,0	1/1:17,18:35:42.14:649,42,0	0/1:20,0:18:1.19:1,0,110	1/1:4,3:7:3.01:46,3,0	1/1:11,1:11:3.01:46,3,0	0/1:15,12:27:37.38:377,0,37	1/1:9,6:15:9.03:139,9,0	1/1:17,10:25:17.87:253,18,0	1/1:10,15:25:36.12:557,36,0	1/1:9,13:22:24.08:371,24,0	1/1:12,12:22:30.10:464,30,0	1/1:26,14:39:36.11:527,36,0	1/1:16,17:33:36.10:556,36,0	./.
chr10	5948640	.	CT	C	119.84	PASS	AB=0.875;AC=3;AF=0.054;AN=56;BaseQRankSum=4.115;DP=642;FS=4.988;HRun=1;HaplotypeScore=128.7415;InbreedingCoeff=0.5204;MQ=51.38;MQ0=23;MQRankSum=-1.370;QD=4.13;ReadPosRankSum=0.571;VQSLOD=0.2897;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:45.15:0,45,708	0/0:11,0:11:15.14:0,15,74	0/0:24,0:6:15.05:0,15,223	0/0:24,0:5:15.05:0,15,223	0/0:20,0:20:34.70:0,35,364	0/0:16,0:16:27.49:0,27,258	0/0:19,0:16:25.82:0,26,271	0/0:41,0:37:99:0,111,1527	0/0:16,0:16:45.15:0,45,713	0/0:31,0:31:74.51:0,75,881	0/0:19,0:19:24.28:0,24,273	0/0:17,0:17:28.85:0,29,337	0/0:28,0:29:34.53:0,35,290	0/0:32,0:32:38.07:0,38,395	0/0:28,0:28:34.89:0,35,339	0/0:31,0:31:48.86:0,49,463	1/1:17,5:20:14.44:190,14,0	0/1:6,1:7:31.28:31,0,85	0/0:11,0:11:25.62:0,26,348	0/0:28,0:28:48.38:0,48,526	0/0:14,0:14:10.69:0,11,102	0/0:26,0:25:34.82:0,35,394	0/0:26,0:25:36.56:0,37,318	0/0:21,0:21:15.45:0,15,73	0/0:23,0:21:24.57:0,25,174	0/0:39,0:37:90.95:0,91,1077	0/0:33,0:33:51.75:0,52,523	0/0:7,0:7:2.99:0,3,23
chr10	5948682	.	GAGAT	G	418.44	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=1.518;DP=545;FS=2.966;HRun=0;HaplotypeScore=128.2460;InbreedingCoeff=0.8030;MQ=73.72;MQ0=7;MQRankSum=-1.204;QD=19.93;ReadPosRankSum=1.121;VQSLOD=3.6619;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,19:21:27.05:512,27,0	0/0:12,0:12:33.11:0,33,838	0/0:28,0:14:25.95:0,26,798	0/0:26,0:15:39.05:0,39,871	0/0:19,0:19:54.19:0,54,1411	0/0:16,0:15:45.15:0,45,1164	0/0:14,0:13:36.12:0,36,903	0/0:33,0:33:90.18:0,90,2246	0/0:19,0:19:57.20:0,57,1539	0/0:19,0:19:48.16:0,48,1220	0/0:12,0:12:30.10:0,30,732	0/0:19,0:19:48.16:0,48,1240	0/0:32,0:32:84.25:0,84,2112	0/0:28,0:28:63.15:0,63,1563	0/0:24,0:24:60.21:0,60,1506	0/0:30,0:30:81.28:0,81,2118	0/0:18,0:16:44.88:0,45,1203	0/0:5,0:5:9.03:0,9,238	0/0:8,0:8:24.08:0,24,645	0/0:21,0:21:60.21:0,60,1496	0/0:11,0:11:20.99:0,21,545	0/0:15,0:15:33.11:0,33,860	0/0:26,0:26:69.24:0,69,1748	0/0:21,0:21:45.15:0,45,1127	0/0:18,0:18:45.15:0,45,1128	0/0:20,0:20:54.19:0,54,1422	0/0:29,0:28:72.07:0,72,1793	0/0:1,0:1:3.01:0,3,81
chr10	5948830	.	AT	A	614.19	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.465;DP=669;FS=2.799;HRun=6;HaplotypeScore=65.1548;InbreedingCoeff=0.9942;MQ=89.06;MQ0=0;MQRankSum=-2.478;QD=25.59;ReadPosRankSum=-0.865;VQSLOD=3.5360;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:93.09:0,93,1158	0/0:10,0:10:30.05:0,30,375	0/0:27,0:27:60.12:0,60,735	0/0:23,0:23:49.92:0,50,587	0/0:25,0:25:69.21:0,69,887	0/0:24,0:23:66.21:0,66,868	0/0:19,0:19:54.16:0,54,695	0/0:34,0:34:96.30:0,96,1250	0/0:27,0:27:75.24:0,75,987	0/0:33,0:33:96.30:0,96,1239	0/0:20,0:20:54.18:0,54,711	0/0:21,0:21:57.15:0,57,708	0/0:24,0:24:69.22:0,69,908	0/0:38,0:38:99:0,114,1485	0/0:31,0:31:90.29:0,90,1184	0/0:30,0:30:87.28:0,87,1145	1/1:1,23:24:66.17:709,66,0	0/0:11,0:11:27.09:0,27,355	0/0:23,0:23:63.20:0,63,819	0/0:23,0:23:60.20:0,60,790	0/0:37,0:37:99:0,108,1387	0/0:20,0:20:54.18:0,54,710	0/0:19,0:19:54.17:0,54,697	0/0:12,0:12:33.06:0,33,414	0/0:23,0:23:66.21:0,66,868	0/0:26,0:26:72.19:0,72,928	0/0:22,0:22:63.20:0,63,828	0/0:9,0:9:21.07:0,21,276
chr10	5951949	.	AGTGT	A	5379.38	PASS	AB=0.688;AC=40;AF=0.769;AN=52;BaseQRankSum=6.112;DP=580;FS=0.639;HRun=0;HaplotypeScore=116.3264;InbreedingCoeff=0.6818;MQ=60.33;MQ0=15;MQRankSum=-2.023;QD=11.88;ReadPosRankSum=4.521;VQSLOD=3.6322;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:14,1:26:46:46,0,60	1/1:3,0:8:12.01:112,12,0	./.	./.	1/1:16,0:30:26.98:239,27,0	1/1:15,12:26:30.08:430,30,0	0/1:10,8:18:37.48:218,0,37	0/0:28,0:28:28.86:0,29,478	1/1:7,10:16:18.06:283,18,0	1/1:15,0:26:27.50:253,28,0	1/1:11,0:29:34.07:283,34,0	1/1:12,0:20:18.01:162,18,0	1/1:14,0:30:33.04:307,33,0	1/1:3,0:13:17.68:167,18,0	1/1:13,16:30:39.13:588,39,0	1/1:11,5:17:18.53:265,19,0	1/1:9,0:19:9.01:83,9,0	1/1:9,0:12:9.01:84,9,0	1/1:9,6:15:17.20:282,17,0	1/1:6,12:19:39.09:559,39,0	0/0:13,0:13:2.42:0,2,14	1/1:11,12:23:27.56:426,28,0	1/1:13,0:20:6.64:66,7,0	1/1:20,0:21:17.99:164,18,0	1/1:15,14:29:24.08:363,24,0	0/0:14,0:14:26.83:0,27,524	0/0:20,0:20:27.09:0,27,565	0/0:18,0:15:15.05:0,15,308
chr10	5953740	.	TG	T	1128.69	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.289;DP=626;FS=18.941;HRun=4;HaplotypeScore=59.8249;InbreedingCoeff=0.9445;MQ=77.29;MQ0=0;MQRankSum=-3.051;QD=32.25;ReadPosRankSum=2.005;VQSLOD=1.9260;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:66.22:0,66,924	0/0:10,0:10:30.07:0,30,399	0/0:15,0:15:42.13:0,42,560	0/0:18,0:18:47.37:0,47,545	0/0:37,0:37:99:0,108,1506	0/0:25,0:25:75.25:0,75,1050	0/0:16,0:16:48.15:0,48,656	0/0:26,0:26:69.22:0,69,937	0/0:21,0:21:60.20:0,60,839	0/0:28,0:28:81.26:0,81,1107	0/0:25,0:25:75.24:0,75,1031	0/0:16,0:16:48.15:0,48,652	0/0:25,0:25:72.23:0,72,985	0/0:23,0:23:69.21:0,69,946	0/0:28,0:28:84.27:0,84,1156	0/0:17,0:17:45.15:0,45,630	1/1:0,35:35:99:1224,102,0	0/0:24,0:24:72.23:0,72,991	0/0:18,0:18:51.17:0,51,712	0/0:31,0:31:90.28:0,90,1220	0/0:12,0:12:33.11:0,33,461	0/0:26,0:26:72.20:0,72,934	0/0:37,0:37:99:0,108,1472	0/0:15,0:14:45.15:0,45,622	0/0:23,0:23:66.21:0,66,906	0/0:23,0:23:66.22:0,66,924	0/0:23,0:23:69.23:0,69,966	0/0:5,0:5:9.03:0,9,126
chr10	5954083	.	T	TACACACACACA	4291.21	PASS	AB=0.915;AC=18;AF=0.321;AN=56;BaseQRankSum=5.435;DP=687;FS=2.863;HRun=0;HaplotypeScore=234.5805;InbreedingCoeff=0.0065;MQ=57.57;MQ0=15;MQRankSum=-6.291;QD=13.12;ReadPosRankSum=-2.618;VQSLOD=3.1273;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:1,0:34:0.35:0,0,298	0/0:11,0:11:26.95:0,27,434	0/0:53,0:30:71.30:0,71,1701	0/0:47,0:21:53.29:0,53,981	0/0:21,0:21:27:0,27,379	1/1:6,0:22:9.03:337,9,0	0/1:20,0:22:24.39:357,0,24	0/1:27,0:27:67.98:68,0,982	1/1:4,0:19:6.49:190,6,0	0/0:24,0:24:69.18:0,69,1320	0/0:21,0:21:35.39:0,35,579	0/0:24,0:23:60.04:0,60,908	0/0:18,0:18:38.73:0,39,537	0/0:28,0:27:50.23:0,50,574	1/1:7,0:25:15.05:559,15,0	0/1:11,1:24:94.56:485,0,95	0/1:24,0:22:43.72:44,0,225	0/0:15,0:15:36.49:0,36,814	0/1:14,0:13:99:121,0,176	0/1:29,0:30:99:747,0,107	0/0:40,0:40:72.08:0,72,1253	0/1:6,0:19:84.44:277,0,84	0/0:23,0:23:44.51:0,45,728	0/0:33,0:33:74.99:0,75,1118	0/1:19,0:21:49.83:552,0,50	0/1:19,0:17:99:215,0,636	0/1:16,0:16:99:317,0,369	0/1:8,0:6:20.88:21,0,289
chr10	5954085	.	T	TACACAC	8753.09	PASS	AB=0.785;AC=49;AF=0.875;AN=56;BaseQRankSum=-1.495;DP=790;FS=1.890;HRun=0;HaplotypeScore=237.7517;InbreedingCoeff=0.1979;MQ=52.62;MQ0=16;MQRankSum=0.066;QD=11.59;ReadPosRankSum=-2.111;VQSLOD=3.6952;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:35:21.07:0,21,281	1/1:7,0:15:12.51:171,13,0	0/1:54,0:30:12.44:51,0,12	0/1:48,0:20:3.92:4,0,61	1/1:11,1:26:9.01:115,9,0	1/1:23,0:22:12.02:259,12,0	1/1:26,0:26:14.34:316,14,0	1/1:38,0:38:42.14:796,42,0	1/1:26,0:26:14.55:252,15,0	0/1:11,0:25:86.12:122,0,86	1/1:9,0:23:18.06:253,18,0	1/1:14,0:25:27.08:337,27,0	1/1:8,0:18:20.60:262,21,0	1/1:12,0:29:23.45:337,23,0	1/1:30,0:30:15.94:393,16,0	1/1:28,0:28:20.90:428,21,0	1/1:28,0:26:30.08:678,30,0	0/1:9,0:19:37.37:37,0,181	1/1:19,0:18:21.07:410,21,0	1/1:38,0:37:36.11:756,36,0	1/1:20,0:44:21.33:339,21,0	1/1:23,0:23:6.02:157,6,0	0/1:10,0:24:86.14:135,0,86	1/1:17,0:36:33.11:424,33,0	1/1:26,0:25:26.12:523,26,0	1/1:20,1:27:36.93:635,37,0	1/1:17,0:22:21.07:495,21,0	1/1:9,0:7:3.01:66,3,0
chr10	5955090	.	AT	A	3076.24	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=17.217;DP=598;FS=6.914;HRun=1;HaplotypeScore=95.2333;InbreedingCoeff=0.9722;MQ=70.24;MQ0=0;MQRankSum=-6.147;QD=18.87;ReadPosRankSum=2.762;VQSLOD=3.7864;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,144,2276	0/0:7,0:7:21.07:0,21,334	0/0:15,0:15:42.13:0,42,616	0/0:19,0:18:51.17:0,51,798	0/0:22,0:22:66.21:0,66,1031	1/1:2,20:22:50.30:448,50,0	1/1:2,17:19:43.11:278,43,0	0/0:33,0:33:96.33:0,96,1535	1/1:3,20:23:50.16:451,50,0	0/0:26,0:26:75.26:0,75,1200	0/0:25,0:25:72.25:0,72,1151	0/0:28,0:28:81.28:0,81,1292	0/0:20,0:20:60.20:0,60,957	0/0:22,0:22:66.21:0,66,1031	1/1:2,19:21:49.11:431,49,0	1/1:0,16:16:47.91:409,48,0	0/0:34,0:34:99:0,102,1625	0/0:22,0:22:66.23:0,66,1055	1/1:1,11:12:35.96:315,36,0	1/1:1,21:22:50.70:401,51,0	0/0:23,0:23:69.24:0,69,1101	1/1:1,10:11:27.93:213,28,0	0/0:18,0:18:54.18:0,54,860	0/0:22,0:22:66.22:0,66,1050	1/1:1,16:17:41.85:344,42,0	0/0:18,0:18:54.18:0,54,843	0/0:29,0:29:87.30:0,87,1391	0/0:1,0:1:3.01:0,3,48
chr10	5955092	.	GCAC	G	5222.01	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=17.337;DP=600;FS=5.481;HRun=0;HaplotypeScore=113.2401;InbreedingCoeff=0.9716;MQ=71.08;MQ0=0;MQRankSum=-7.470;QD=32.04;ReadPosRankSum=2.554;VQSLOD=4.9541;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,141,3421	0/0:6,0:6:18.06:0,18,443	0/0:15,0:15:42.14:0,42,1017	0/0:21,0:20:60.20:0,60,1297	0/0:22,0:22:66.23:0,66,1626	1/1:4,20:24:62.39:739,62,0	1/1:2,17:19:44.98:475,45,0	0/0:33,0:33:96.33:0,96,2367	1/1:4,19:23:63.16:757,63,0	0/0:25,0:25:75.26:0,75,1848	0/0:25,0:25:72.25:0,72,1771	0/0:27,0:27:81.28:0,81,1997	0/0:20,0:20:60.21:0,60,1473	0/0:23,0:23:69.24:0,69,1700	1/1:1,19:21:53.38:678,53,0	1/1:0,16:16:48.15:632,48,0	0/0:34,0:34:99:0,102,2501	0/0:22,0:22:66.23:0,66,1627	1/1:0,11:11:33.11:443,33,0	1/1:1,21:22:51.15:635,51,0	0/0:25,0:25:75.26:0,75,1846	1/1:1,10:11:32.31:362,32,0	0/0:17,0:17:51.18:0,51,1257	0/0:22,0:22:66.23:0,66,1621	1/1:0,16:16:39.12:500,39,0	0/0:17,0:17:51.18:0,51,1258	0/0:32,0:32:96.33:0,96,2357	0/0:1,0:1:3.01:0,3,74
chr10	5955754	.	C	CCAACACCTCTTCT	942.96	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-0.892;DP=770;FS=3.457;HRun=0;HaplotypeScore=271.7114;InbreedingCoeff=0.9617;MQ=78.47;MQ0=0;MQRankSum=-3.278;QD=94.30;ReadPosRankSum=-0.781;VQSLOD=2.7515;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,147,4991	0/0:15,0:15:45.15:0,45,1735	0/0:20,0:20:30.45:0,30,1391	0/0:13,0:14:35.15:0,35,1125	0/0:31,0:31:84.24:0,84,2712	0/0:33,0:33:96.30:0,96,3576	0/0:34,0:34:99:0,99,3174	0/0:38,0:38:99:0,108,3476	0/0:29,0:29:84.27:0,84,3036	0/0:41,0:41:99:0,123,4502	0/0:23,0:23:66.21:0,66,2323	0/0:23,0:23:66.23:0,66,2477	0/0:32,0:32:96.33:0,96,3571	0/0:26,0:26:78.25:0,78,2725	0/0:28,0:28:84.27:0,84,2918	0/0:37,0:37:99:0,111,3970	1/1:3,5:10:18.06:1033,18,0	0/0:20,0:20:57.17:0,57,2128	0/0:29,0:29:84.22:0,84,2602	0/0:28,0:28:81.25:0,81,2910	0/0:43,0:43:99:0,129,4782	0/0:25,0:25:75.24:0,75,2553	0/0:17,0:17:51.16:0,51,1873	0/0:36,0:36:99:0,105,3775	0/0:25,0:25:75.25:0,75,2787	0/0:24,0:24:72.23:0,72,2627	0/0:35,0:35:99:0,105,3983	0/0:4,0:4:12.04:0,12,484
chr10	5956310	.	ACT	A	920.70	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.197;DP=680;FS=2.726;HRun=0;HaplotypeScore=96.1382;InbreedingCoeff=0.9983;MQ=77.21;MQ0=0;MQRankSum=1.776;QD=32.88;ReadPosRankSum=1.972;VQSLOD=5.8697;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:84.27:0,84,1515	0/0:11,0:11:33.10:0,33,580	0/0:14,0:14:27.03:0,27,523	0/0:16,0:16:35.99:0,36,528	0/0:37,0:36:99:0,102,1863	0/0:30,0:30:90.28:0,90,1607	0/0:15,0:15:42.11:0,42,716	0/0:39,0:39:99:0,117,2062	0/0:20,0:20:60.18:0,60,1054	0/0:27,0:27:81.24:0,81,1343	0/0:25,0:25:75.24:0,75,1336	0/0:26,0:26:75.24:0,75,1330	0/0:21,0:21:60.19:0,60,1059	0/0:25,0:25:75.23:0,75,1323	0/0:17,0:17:51.15:0,51,893	0/0:26,0:26:78.21:0,78,1320	1/1:0,28:28:69.23:1016,69,0	0/0:22,0:22:60.16:0,60,1025	0/0:27,0:27:75.26:0,75,1375	0/0:26,0:26:75.21:0,75,1275	0/0:11,0:11:33.10:0,33,586	0/0:34,0:34:98.13:0,98,1619	0/0:21,0:21:63.20:0,63,1126	0/0:17,0:17:51.17:0,51,928	0/0:33,0:33:96.27:0,96,1666	0/0:26,0:26:78.27:0,78,1432	0/0:40,0:40:99:0,114,2070	0/0:16,0:16:48.09:0,48,797
chr10	5956553	.	TG	T	11974.84	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=13.906;DP=817;FS=6.838;HRun=1;HaplotypeScore=86.3965;InbreedingCoeff=0.9986;MQ=92.67;MQ0=0;MQRankSum=-6.057;QD=38.75;ReadPosRankSum=4.689;VQSLOD=5.2580;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,166,2618	1/1:0,7:7:18.06:252,18,0	0/0:31,0:31:90.22:0,90,1380	0/0:36,0:36:80.51:0,81,1429	1/1:0,30:30:81.27:1133,81,0	0/0:31,0:31:93.30:0,93,1458	0/0:22,0:22:66.22:0,66,1049	0/0:31,0:31:93.31:0,93,1465	0/0:26,0:26:75.24:0,75,1171	1/1:0,23:23:69.23:962,69,0	1/1:0,25:25:66.22:923,66,0	1/1:0,40:40:99:1636,117,0	1/1:0,32:32:90.13:1258,90,0	1/1:0,28:28:81.24:1112,81,0	0/0:34,0:34:99:0,102,1608	0/0:26,0:26:78.25:0,78,1220	0/0:31,0:31:90.27:0,90,1387	1/1:0,23:23:63.21:881,63,0	0/0:30,0:30:90.31:0,90,1433	0/0:30,0:30:90.29:0,90,1412	1/1:0,47:47:99:1804,129,0	0/0:24,0:24:72.23:0,72,1126	1/1:0,19:19:48.16:671,48,0	1/1:0,35:35:96.32:1343,96,0	0/0:31,0:31:93.32:0,93,1478	0/0:31,0:31:93.31:0,93,1464	0/0:30,0:30:90.31:0,90,1436	0/0:9,0:9:24.08:0,24,384
chr10	5959257	.	CTT	C	472.18	PASS	AB=0.818;AC=5;AF=0.089;AN=56;BaseQRankSum=2.255;DP=565;FS=1.621;HRun=14;HaplotypeScore=82.8710;InbreedingCoeff=0.7363;MQ=61.52;MQ0=3;MQRankSum=2.730;QD=7.87;ReadPosRankSum=5.034;VQSLOD=0.9975;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,17:21:21.53:312,22,0	0/0:10,0:10:20.98:0,21,227	0/0:26,0:14:19.15:0,19,183	0/0:25,0:16:8.76:0,9,75	0/0:33,0:33:62.14:0,62,535	0/0:22,0:22:56.78:0,57,531	0/0:15,0:15:29.46:0,29,329	0/0:29,1:32:37.84:0,38,714	0/0:19,0:17:23.88:0,24,214	0/0:32,0:31:70.65:0,71,681	0/0:20,0:20:20.88:0,21,183	0/0:16,0:15:20.85:0,21,176	0/0:21,0:21:47.84:0,48,460	0/0:18,0:15:34.68:0,35,319	0/0:16,0:16:26.89:0,27,256	0/0:34,0:33:75.21:0,75,621	1/1:5,16:21:29.96:278,30,0	0/0:6,0:6:8.95:0,9,81	0/0:15,0:15:35.90:0,36,336	0/0:24,0:24:48.80:0,49,503	0/0:9,0:9:15.25:0,15,96	0/0:11,0:14:26.78:0,27,226	0/0:26,0:24:53.62:0,54,460	0/0:19,0:19:12.76:0,13,87	0/0:21,0:21:43.64:0,44,402	0/0:23,0:23:52.24:0,52,577	0/1:14,2:18:8.45:8,0,419	0/0:7,0:7:18.92:0,19,220
chr10	5960145	.	G	GCA	16860.60	PASS	AB=0.711;AC=39;AF=0.696;AN=56;BaseQRankSum=3.476;DP=701;FS=5.434;HRun=0;HaplotypeScore=130.0141;InbreedingCoeff=0.7457;MQ=72.00;MQ0=4;MQRankSum=-0.297;QD=33.12;ReadPosRankSum=4.090;VQSLOD=7.1118;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:42.59:0,43,968	1/1:1,8:8:18.06:295,18,0	0/0:24,0:21:14.99:0,15,160	0/1:20,0:14:12.19:12,0,163	1/1:2,30:32:35.05:1094,35,0	1/1:3,14:18:33.11:541,33,0	0/1:6,11:18:44.31:363,0,44	0/0:42,0:42:84.23:0,84,1015	1/1:2,17:18:16.98:799,17,0	1/1:6,26:32:38.04:1134,38,0	1/1:8,26:33:32.10:1045,32,0	1/1:2,18:20:48.16:787,48,0	1/1:6,16:23:48.16:770,48,0	1/1:0,22:23:63.21:1011,63,0	1/1:10,23:33:54.18:885,54,0	1/1:3,17:21:51.17:837,51,0	0/0:22,0:23:66.04:0,66,794	1/1:6,21:27:59.95:983,60,0	1/1:3,17:20:48.16:782,48,0	1/1:3,27:29:32.03:1045,32,0	1/1:4,20:24:57.19:935,57,0	1/1:5,25:31:69.24:1131,69,0	1/1:1,20:22:51.16:836,51,0	0/1:3,20:24:14.20:825,0,14	1/1:5,23:28:14:750,14,0	0/0:29,0:29:26.11:0,26,796	0/0:25,0:24:69.22:0,69,855	0/0:8,0:9:26.92:0,27,312
chr10	5961040	.	CAAGCCACTG	C	927.09	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.872;DP=454;FS=3.712;HRun=0;HaplotypeScore=126.4568;InbreedingCoeff=0.8859;MQ=71.14;MQ0=0;MQRankSum=-1.844;QD=66.22;ReadPosRankSum=-0.205;VQSLOD=3.1782;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,14:14:33.11:1022,33,0	0/0:7,0:7:21.03:0,21,932	0/0:11,0:11:7.42:0,7,969	0/0:17,0:16:23.16:0,23,1452	0/0:14,0:14:38.96:0,39,1549	0/0:19,0:19:57.20:0,57,2706	0/0:15,0:15:45.11:0,45,2118	0/0:35,0:35:99:0,102,4860	0/0:8,0:8:24.08:0,24,1151	0/0:12,0:12:36.12:0,36,1619	0/0:14,0:14:42.14:0,42,1958	0/0:10,0:10:27.09:0,27,1294	0/0:9,0:9:27.09:0,27,1340	0/0:18,0:18:51.18:0,51,2486	0/0:21,0:21:63.18:0,63,3002	0/0:12,0:12:36.12:0,36,1783	0/0:22,0:22:63.22:0,63,2938	0/0:14,0:14:39.13:0,39,1888	0/0:22,0:22:66.18:0,66,3014	0/0:21,0:21:60.21:0,60,2814	0/0:20,0:20:42.06:0,42,2014	0/0:12,0:12:36.12:0,36,1616	0/0:8,0:8:11.47:0,11,607	0/0:16,0:16:39.08:0,39,1822	0/0:26,0:26:72.25:0,72,3466	0/0:27,0:27:81.28:0,81,3896	0/0:19,0:19:54.19:0,54,2709	0/0:8,0:8:24.08:0,24,1213
chr10	5961127	.	A	AC	5256.57	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=1.534;DP=578;FS=0.000;HRun=7;HaplotypeScore=79.5384;InbreedingCoeff=0.9964;MQ=87.89;MQ0=0;MQRankSum=-4.148;QD=28.57;ReadPosRankSum=2.910;VQSLOD=5.3122;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:75.12:0,75,724	1/1:0,9:9:24.07:289,24,0	0/0:23,0:23:57.05:0,57,541	0/0:19,0:19:54.08:0,54,518	1/1:0,23:23:63.19:760,63,0	0/0:16,0:16:48.06:0,48,456	0/0:16,0:16:36.06:0,36,348	0/0:40,0:40:93.10:0,93,885	0/0:17,0:17:45.05:0,45,428	1/1:2,16:18:48.15:579,48,0	1/1:3,16:19:42.13:506,42,0	1/1:5,11:16:27.04:310,27,0	1/1:2,13:15:36.11:434,36,0	1/1:1,21:22:57.13:672,57,0	0/0:32,0:32:90.14:0,90,869	0/0:27,0:27:78.12:0,78,753	0/0:19,1:20:14.84:0,15,427	1/1:1,13:14:39.12:471,39,0	0/0:17,0:17:36.04:0,36,344	0/0:22,0:22:54.07:0,54,516	1/1:2,16:18:28.33:329,28,0	0/0:20,0:20:51.04:0,51,475	1/1:0,20:20:54.17:652,54,0	1/1:0,10:10:21.06:254,21,0	0/0:31,0:31:87.13:0,87,835	0/0:23,0:23:54.07:0,54,517	0/0:26,0:26:66.10:0,66,637	0/0:16,0:16:48.08:0,48,464
chr10	5961581	.	A	ATGCTGCTGC	10302.31	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=5.138;DP=635;FS=15.250;HRun=0;HaplotypeScore=209.3582;InbreedingCoeff=0.8261;MQ=75.10;MQ0=3;MQRankSum=-7.411;QD=24.18;ReadPosRankSum=-1.676;VQSLOD=2.5330;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:45.11:0,45,979	1/1:10,0:11:21.07:400,21,0	0/0:33,0:23:27.06:0,27,615	0/0:38,0:32:44.71:0,45,890	1/1:4,0:4:2.73:23,3,0	1/1:21,0:20:11.98:178,12,0	1/1:33,0:33:29.53:682,30,0	0/0:24,0:24:5.18:0,5,985	1/1:20,0:20:30.10:809,30,0	1/1:21,0:21:30.08:530,30,0	1/1:10,0:10:6.02:120,6,0	1/1:10,17:27:15.05:567,15,0	1/1:8,22:32:18.06:722,18,0	1/1:11,23:37:24.55:1062,25,0	1/1:23,0:23:34.24:884,34,0	1/1:19,0:19:48.15:1425,48,0	0/0:43,0:43:49.55:0,50,1235	1/1:22,2:24:47.95:1321,48,0	1/1:19,0:19:38.87:678,39,0	1/1:8,0:8:3:25,3,0	1/1:39,0:39:23.85:381,24,0	1/1:12,0:11:2.80:70,3,0	1/1:18,0:17:11.77:115,12,0	1/1:9,18:27:2.88:132,3,0	1/1:19,0:16:9.03:178,9,0	0/0:23,0:23:45.06:0,45,970	0/0:15,0:15:36.12:0,36,892	0/0:10,0:10:24.08:0,24,658
chr10	5961598	.	G	GCT	964.20	PASS	AB=0.969;AC=20;AF=0.357;AN=56;BaseQRankSum=7.438;DP=596;FS=31.686;HRun=0;HaplotypeScore=159.8035;InbreedingCoeff=-0.0307;MQ=48.73;MQ0=12;MQRankSum=-4.225;QD=3.07;ReadPosRankSum=1.417;VQSLOD=1.0405;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:55.85:0,56,798	0/0:9,0:9:1.25:0,1,130	0/0:42,0:16:42.11:0,42,630	0/0:41,0:23:60.08:0,60,845	0/1:9,0:9:20.92:21,0,36	0/1:18,2:19:26.24:72,0,26	0/1:23,6:29:33.91:78,0,34	0/0:25,0:24:50.58:0,51,1036	1/1:8,9:17:15.26:184,15,0	0/1:22,0:21:34.91:35,0,400	0/1:7,0:7:11.29:11,0,135	0/1:24,0:22:21.29:21,0,55	0/1:28,0:28:38.17:38,0,170	0/1:31,0:30:65.76:69,0,66	1/1:14,8:21:11.29:99,11,0	1/1:9,10:19:33.39:289,33,0	0/0:35,0:35:55.73:0,56,535	0/0:22,0:22:15.31:0,15,334	0/1:19,1:19:98.75:99,0,189	1/1:4,0:4:2.66:25,3,0	0/1:36,0:36:28.96:29,0,120	0/0:10,0:8:4.47:0,4,38	0/1:12,0:10:47.20:47,0,82	0/0:26,0:26:2.40:0,2,19	0/1:13,1:10:16.76:19,0,17	0/0:20,0:20:60.11:0,60,854	0/0:17,0:17:48.16:0,48,760	0/0:8,0:8:24.08:0,24,389
chr10	5961599	.	G	GC	101.24	PASS	AB=0.815;AC=6;AF=0.107;AN=56;BaseQRankSum=7.679;DP=604;FS=4.813;HRun=0;HaplotypeScore=162.6194;InbreedingCoeff=0.2510;MQ=47.47;MQ0=12;MQRankSum=-6.722;QD=0.84;ReadPosRankSum=5.103;VQSLOD=1.9556;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:49.88:0,50,662	0/0:9,0:9:21.54:0,22,160	0/0:43,0:15:39.13:0,39,544	0/0:42,0:23:60.16:0,60,785	0/0:9,0:9:1.99:0,2,51	0/0:18,1:19:10.37:0,10,82	0/1:24,4:30:14.08:14,0,59	0/0:24,0:24:71.44:0,71,953	0/1:9,5:18:5.22:69,0,5	0/0:22,0:21:49.48:0,49,510	0/0:7,0:7:17.13:0,17,161	0/0:25,0:23:17.07:0,17,122	0/0:27,0:27:33.19:0,33,254	0/0:32,0:31:26.69:0,27,182	0/1:14,3:21:27.67:28,0,33	0/1:9,4:19:0.20:96,0,0	0/0:35,0:35:78.91:0,79,468	0/0:23,0:23:56.59:0,57,426	0/0:20,1:20:24.14:0,24,293	0/1:5,0:5:0:1,0,0	0/0:35,0:35:29.08:0,29,201	0/0:11,0:9:11.26:0,11,54	0/0:11,0:9:14.68:0,15,139	0/1:26,0:26:0:0,0,1	0/0:14,1:11:1.18:0,1,35	0/0:20,0:20:54.17:0,54,738	0/0:18,0:18:48.12:0,48,670	0/0:8,0:8:24.08:0,24,335
chr10	5961661	.	T	TG	169.01	PASS	AB=0.927;AC=4;AF=0.071;AN=56;BaseQRankSum=6.349;DP=527;FS=1.553;HRun=1;HaplotypeScore=91.3585;InbreedingCoeff=-0.0933;MQ=55.63;MQ0=20;MQRankSum=-4.310;QD=2.49;ReadPosRankSum=-0.136;VQSLOD=-0.7113;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:16,7:22:32.76:0,33,320	0/1:2,1:3:14.95:32,0,15	0/0:40,0:16:41.95:0,42,503	0/0:52,0:24:61.08:0,61,833	0/0:14,0:14:23.98:0,24,315	0/0:13,2:15:35.96:0,36,401	0/0:21,5:26:53.82:0,54,576	0/0:12,0:11:29.49:0,29,379	0/0:20,5:24:11.97:0,12,481	0/1:12,0:10:88.90:89,0,152	0/0:5,0:5:0.79:0,1,36	0/1:31,0:30:99:112,0,457	0/1:21,1:22:44.19:44,0,364	0/0:26,0:25:19.62:0,20,338	0/0:23,4:27:59.82:0,60,663	0/0:13,0:12:23.55:0,24,320	0/0:21,0:19:37.79:0,38,493	0/0:20,0:19:26.65:0,27,342	0/0:7,0:5:8.37:0,8,119	0/0:4,0:4:3.01:0,3,40	0/0:34,1:34:46.43:0,46,546	0/0:7,3:10:18:0,18,209	0/0:6,0:6:5.50:0,6,74	0/0:22,0:22:41.98:0,42,484	0/0:11,3:13:29.14:0,29,286	0/0:19,0:19:22.25:0,22,482	0/0:19,0:18:44.18:0,44,537	0/0:4,0:4:9.46:0,9,88
chr10	5963766	.	TTTG	T	5504.38	PASS	AB=1.000;AC=33;AF=0.589;AN=56;BaseQRankSum=8.701;DP=673;FS=23.256;HRun=0;HaplotypeScore=155.8055;InbreedingCoeff=-0.1369;MQ=52.84;MQ0=17;MQRankSum=-2.618;QD=9.66;ReadPosRankSum=11.321;VQSLOD=2.1952;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:12.59:0,13,110	1/1:4,0:4:8.30:40,8,0	0/0:20,0:9:17.03:0,17,171	0/0:25,0:10:21.34:0,21,199	0/1:26,0:26:34.84:155,0,35	1/1:22,0:22:33.54:230,34,0	0/1:22,0:22:74.21:179,0,74	1/1:5,22:27:62.47:671,62,0	0/1:19,0:19:30.37:104,0,30	0/1:32,0:31:99:127,0,200	1/1:19,0:18:5.40:165,5,0	0/1:27,0:27:71.51:162,0,72	0/1:31,0:31:99:129,0,121	0/1:31,0:30:43.30:211,0,43	0/1:24,0:23:31.42:189,0,31	0/1:21,0:21:27.99:150,0,28	0/0:26,0:21:18.33:0,18,140	0/1:15,0:15:11.96:97,0,12	0/1:24,0:22:54.79:99,0,55	0/1:22,0:22:47.93:116,0,48	0/1:20,0:20:80.24:131,0,80	1/1:37,0:35:19.83:303,20,0	1/1:28,0:28:13.47:173,13,0	0/1:27,0:25:56.35:127,0,56	0/1:25,0:23:77.10:77,0,80	1/1:10,30:39:99:1265,113,0	1/1:11,6:17:39.83:411,40,0	1/1:8,2:9:15.51:194,16,0
chr10	5963767	.	TTG	T	1866.95	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-5.788;DP=662;FS=0.435;HRun=0;HaplotypeScore=159.3347;InbreedingCoeff=0.8686;MQ=52.75;MQ0=17;MQRankSum=-9.056;QD=20.52;ReadPosRankSum=-6.092;VQSLOD=1.9897;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:31,1:32:14.92:0,15,125	0/0:4,0:4:3.06:0,3,10	0/0:19,0:8:15:0,15,139	0/0:25,0:10:20.68:0,21,174	0/0:26,0:26:23.12:0,23,128	0/0:22,0:22:27.19:0,27,102	0/0:22,0:22:23.03:0,23,159	1/1:27,0:27:60.15:503,60,0	0/0:18,0:18:29.31:0,29,125	0/0:31,0:30:48:0,48,340	0/0:19,0:18:6:0,6,62	0/0:27,0:27:39.05:0,39,207	0/0:31,0:31:41.83:0,42,240	0/0:30,0:29:39.55:0,40,197	0/0:23,0:22:6.15:0,6,122	0/0:21,0:21:33:0,33,158	0/0:26,0:21:12.89:0,13,55	0/0:15,0:15:7.88:0,8,61	0/0:24,0:22:34.56:0,35,171	0/0:21,0:21:28.92:0,29,147	0/0:20,0:20:29.63:0,30,169	0/0:36,0:34:23.15:0,23,128	0/0:27,0:27:33.16:0,33,126	0/0:27,0:25:35.66:0,36,175	0/0:25,0:23:40.34:0,40,200	1/1:34,6:39:99:1016,112,0	1/1:14,3:17:41:364,41,0	1/1:7,0:6:17.73:142,18,0
chr10	5963769	.	GTTT	G	11397.45	PASS	AB=0.993;AC=46;AF=0.821;AN=56;BaseQRankSum=-2.631;DP=668;FS=3.384;HRun=14;HaplotypeScore=135.3108;InbreedingCoeff=0.4191;MQ=51.29;MQ0=23;MQRankSum=3.326;QD=19.03;ReadPosRankSum=6.245;VQSLOD=3.1991;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:32,0:32:25.48:25,0,28	1/1:0,4:4:9.03:105,9,0	0/0:17,0:6:6.49:0,6,77	0/0:24,0:10:8.98:0,9,97	1/1:5,23:26:47.67:541,48,0	1/1:0,21:21:60.18:699,60,0	1/1:8,14:22:47.75:556,48,0	0/1:30,0:30:53.14:173,0,53	1/1:5,13:18:35.92:417,36,0	1/1:10,19:28:50.64:574,51,0	1/1:4,16:18:41.97:489,42,0	1/1:6,21:27:53.57:627,54,0	1/1:10,22:31:44.72:525,45,0	1/1:6,24:29:65.87:768,66,0	1/1:5,18:22:56.93:647,57,0	1/1:5,16:21:50.86:583,51,0	0/0:7,0:22:21.03:0,21,283	1/1:4,11:15:26.69:310,27,0	1/1:8,16:22:38.89:451,39,0	1/1:4,17:21:38.82:454,39,0	1/1:6,14:20:3.10:428,3,0	1/1:6,30:34:81.08:936,81,0	1/1:0,26:26:53.93:631,54,0	1/1:8,19:25:44.75:523,45,0	1/1:8,16:22:35.71:420,36,0	1/1:41,0:40:5.49:361,5,0	0/1:19,0:19:67.02:89,0,67	0/1:7,0:6:10.09:64,0,10
chr10	5963772	.	T	TTGTTTTGTTTTG	1964.46	PASS	AB=1.000;AC=22;AF=0.393;AN=56;BaseQRankSum=-10.883;DP=669;FS=2.292;HRun=0;HaplotypeScore=273.0431;InbreedingCoeff=-0.5693;MQ=49.54;MQ0=25;MQRankSum=-6.728;QD=3.74;ReadPosRankSum=-11.022;VQSLOD=-0.2659;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:8,22:35:2.47:365,2,0	0/0:5,0:5:9.03:0,9,175	0/1:17,0:6:20.38:20,0,75	0/0:22,0:7:4.86:0,5,146	0/1:30,0:27:78.63:79,0,700	0/1:22,0:22:78.02:78,0,973	0/1:21,0:21:99:271,0,324	0/1:30,0:29:25.79:26,0,524	0/1:18,0:18:16.90:17,0,661	0/1:28,0:27:99:173,0,523	0/1:20,0:18:47.42:47,0,555	0/0:27,0:27:2.13:0,2,1036	0/1:31,0:30:71.39:71,0,745	0/0:29,0:28:2.89:0,3,1250	0/1:24,0:23:99:267,0,657	0/1:21,0:21:99:130,0,684	0/1:26,0:20:10.96:11,0,102	0/0:15,0:15:26.14:0,26,462	0/1:23,0:21:99:136,0,532	0/1:21,0:21:71.58:72,0,635	0/1:20,0:20:99:103,0,563	0/1:36,0:34:99:144,0,1227	0/0:26,0:26:41.10:0,41,1116	0/1:26,0:24:0.48:0,0,870	0/1:25,0:23:36.79:37,0,712	0/1:41,0:40:57.49:57,0,978	0/0:20,0:20:3.44:0,3,358	0/1:9,0:8:9.66:10,0,164
chr10	5963773	.	T	TG	4436.55	PASS	AB=1.000;AC=41;AF=0.732;AN=56;BaseQRankSum=1.046;DP=665;FS=7.436;HRun=0;HaplotypeScore=146.0375;InbreedingCoeff=0.8287;MQ=49.15;MQ0=26;MQRankSum=3.996;QD=8.84;ReadPosRankSum=7.666;VQSLOD=3.9296;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:29:4.69:36,5,0	0/1:6,0:6:10.09:15,0,10	0/0:16,0:5:5.75:0,6,71	0/0:20,0:6:3.70:0,4,63	1/1:30,0:27:42.07:221,42,0	1/1:23,0:23:49.39:203,49,0	1/1:20,2:21:54.75:280,55,0	0/0:30,0:29:61.48:0,61,469	1/1:18,0:18:24.06:165,24,0	1/1:27,0:26:60.26:346,60,0	1/1:20,0:18:29.37:154,29,0	1/1:27,0:27:41.86:268,42,0	1/1:32,0:31:38.14:257,38,0	1/1:29,0:28:58.62:268,59,0	1/1:26,0:25:38.51:272,39,0	1/1:21,0:21:55.21:273,55,0	0/0:26,0:20:16.04:0,16,105	1/1:14,1:15:6.53:86,7,0	1/1:23,0:21:24.59:189,25,0	1/1:21,0:21:40.72:215,41,0	1/1:19,1:20:41.64:206,42,0	1/1:36,0:34:71.88:307,72,0	1/1:26,0:26:46:190,46,0	1/1:25,1:24:49.65:246,50,0	1/1:24,0:22:46.99:240,47,0	0/0:41,0:40:89.01:0,89,702	0/0:21,0:20:47.99:0,48,349	0/0:9,0:8:22.49:0,22,159
chr10	5963777	.	T	TG	1562.61	PASS	AB=0.982;AC=27;AF=0.482;AN=56;BaseQRankSum=6.086;DP=653;FS=11.227;HRun=0;HaplotypeScore=150.7114;InbreedingCoeff=0.0809;MQ=47.75;MQ0=30;MQRankSum=5.571;QD=3.40;ReadPosRankSum=12.709;VQSLOD=0.6945;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:30:14.03:0,14,71	1/1:6,0:6:10.26:47,10,0	0/0:14,0:4:8.98:0,9,76	0/0:20,0:6:13.77:0,14,106	0/1:29,0:26:22.01:73,0,22	1/1:23,0:23:46.86:174,47,0	0/1:20,2:21:24.45:100,0,24	0/0:31,0:29:56.06:0,56,407	0/1:19,0:19:10.35:61,0,10	0/1:27,0:25:35.27:134,0,35	0/1:21,0:19:18.37:46,0,18	0/1:28,0:28:71.48:71,0,73	0/1:29,0:28:23.72:65,0,24	1/1:27,0:26:17.61:92,18,0	1/1:23,0:22:7.70:139,8,0	0/1:20,0:20:7.32:76,0,7	0/0:28,0:22:16.04:0,16,104	0/1:15,1:15:5.71:46,0,6	1/1:21,0:19:16.84:121,17,0	0/1:19,0:19:25.21:49,0,25	0/1:18,1:18:46.31:46,0,48	1/1:35,0:34:32.67:174,33,0	1/1:27,0:27:34.30:113,34,0	0/1:24,1:23:7.78:62,0,8	0/1:23,0:21:26.80:63,0,27	0/0:39,0:38:80.61:0,81,626	0/0:22,0:21:53.43:0,53,373	0/0:8,0:7:20.09:0,20,134
chr10	5966441	.	T	TCACATAACACATATCTCC	66733.32	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-5.056;DP=601;FS=1.126;HRun=0;HaplotypeScore=224.2717;InbreedingCoeff=0.8357;MQ=84.13;MQ0=2;MQRankSum=-11.287;QD=129.83;ReadPosRankSum=6.694;VQSLOD=4.6458;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,2:17:11.99:582,12,0	1/1:5,2:9:12.04:1010,12,0	0/0:39,0:34:76.38:0,76,3076	0/0:46,0:39:86.85:0,87,2594	1/1:6,12:30:41.80:2708,42,0	1/1:10,5:26:39.13:2640,39,0	1/1:8,2:17:16.77:1081,17,0	1/1:33,0:33:81.28:5019,81,0	1/1:3,6:12:27.09:2253,27,0	1/1:12,10:30:80.94:5793,81,0	1/1:6,6:21:30.09:2224,30,0	1/1:8,8:21:35.14:2858,35,0	1/1:5,4:19:21.07:1632,21,0	1/1:6,7:27:34:2607,34,0	1/1:7,7:19:45.11:3350,45,0	1/1:5,7:22:36.08:2748,36,0	1/1:4,2:9:15.01:1072,15,0	1/1:1,1:2:6.02:527,6,0	1/1:11,4:23:66.22:3604,66,0	1/1:5,15:27:53.87:4261,54,0	1/1:6,1:12:8.45:246,8,0	1/1:6,10:24:39.05:2982,39,0	1/1:6,12:22:51.17:3876,51,0	1/1:11,0:11:6.02:76,6,0	1/1:7,7:20:39.13:3101,39,0	1/1:8,10:27:66.98:4902,67,0	1/1:8,9:24:44.85:3419,45,0	1/1:1,8:10:27.09:2161,27,0
chr10	5966497	.	CTTTGTGTGTG	C	798.42	PASS	AB=0.931;AC=15;AF=0.300;AN=50;BaseQRankSum=-4.593;DP=353;FS=0.894;HRun=0;HaplotypeScore=135.1535;InbreedingCoeff=0.1226;MQ=29.37;MQ0=14;MQRankSum=-0.468;QD=4.70;ReadPosRankSum=-1.228;VQSLOD=2.2547;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:12,0:12:0:0,0,0	0/0:6,1:7:3.01:0,3,44	0/0:2,0:1:3.01:0,3,95	./.	1/1:10,2:12:2.84:51,3,0	0/0:18,0:18:9.50:0,10,184	0/0:14,0:12:3.89:0,4,97	0/1:21,0:21:69.88:70,0,255	./.	0/1:8,2:10:28.78:181,0,29	0/1:4,3:7:0:0,0,0	1/1:11,0:13:14.79:237,15,0	1/1:13,0:14:8.86:162,9,0	0/1:21,0:16:54.55:55,0,66	0/0:16,0:14:3.48:0,3,92	0/0:13,0:13:9.03:0,9,191	0/0:14,0:12:6.72:0,7,544	0/1:8,1:9:91.61:93,0,92	0/1:15,0:14:11.95:12,0,407	0/0:11,0:10:0:0,0,0	0/0:8,0:7:0:0,0,1	0/1:14,0:12:0.34:0,0,0	0/0:8,0:6:0:0,0,0	./.	0/0:19,0:17:0.47:0,0,1	0/1:18,1:18:64.84:65,0,552	0/0:20,0:19:16.52:0,17,432	0/0:9,0:5:12.04:0,12,441
chr10	5966499	.	T	TCTCTCTC	1511.41	PASS	AB=0.927;AC=26;AF=0.520;AN=50;BaseQRankSum=-0.052;DP=314;FS=14.026;HRun=0;HaplotypeScore=116.6850;InbreedingCoeff=-0.1046;MQ=30.68;MQ0=15;MQRankSum=-0.601;QD=6.17;ReadPosRankSum=-0.681;VQSLOD=1.5592;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:13:2.99:0,3,42	1/1:3,0:4:8.96:117,9,0	1/1:1,0:1:2.04:6,2,0	./.	0/1:8,0:8:0:0,0,0	1/1:17,0:19:8.80:130,9,0	1/1:13,0:11:0.44:1,0,0	0/1:20,0:20:19.15:19,0,213	0/0:7,0:7:3:0,3,28	0/1:8,0:8:85.81:136,0,86	./.	0/0:10,0:8:14.74:0,15,99	0/1:11,0:10:26.59:47,0,27	0/1:12,2:11:5.10:152,0,5	0/1:11,0:10:0:0,0,0	0/1:9,0:11:33.64:34,0,48	0/0:13,0:12:7.81:0,8,160	0/1:8,0:9:64.62:164,0,65	0/1:13,1:13:41.87:250,0,42	1/1:9,0:8:3.90:44,4,0	0/0:6,0:4:0:0,0,0	0/1:11,2:12:0.29:0,0,0	./.	1/1:6,0:7:3.01:38,3,0	0/1:20,0:19:0.11:0,0,0	0/1:20,1:20:99:332,0,136	0/1:16,0:17:62.77:106,0,63	0/1:9,0:6:45.09:64,0,45
chr10	5966633	.	TA	T	11510.56	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=9.224;DP=572;FS=2.227;HRun=2;HaplotypeScore=61.6486;InbreedingCoeff=0.9758;MQ=78.62;MQ0=0;MQRankSum=-2.211;QD=34.16;ReadPosRankSum=1.053;VQSLOD=5.1762;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,16:16:42.14:545,42,0	0/0:7,0:7:21.04:0,21,292	0/0:19,0:19:57.18:0,57,830	0/0:11,0:11:24.08:0,24,346	0/0:30,0:30:90.26:0,90,1322	1/1:1,36:37:90.29:1166,90,0	1/1:1,11:12:30.10:389,30,0	1/1:0,33:33:93.24:1148,93,0	1/1:0,8:8:24.08:311,24,0	0/0:30,0:30:90.22:0,90,1298	0/0:16,0:16:45.15:0,45,674	0/0:17,0:17:48.09:0,48,690	0/0:14,0:14:42.02:0,42,557	0/0:16,0:16:48.09:0,48,691	1/1:0,13:13:36.12:467,36,0	1/1:0,20:20:54.18:700,54,0	1/1:2,25:27:69.22:895,69,0	0/0:33,0:33:96.20:0,96,1366	1/1:2,23:25:69.19:877,69,0	1/1:0,32:32:90.22:1132,90,0	0/0:9,0:9:27.07:0,27,384	1/1:0,19:19:45.10:565,45,0	0/0:26,0:26:78.24:0,78,1146	0/0:7,0:7:20.94:0,21,261	1/1:0,20:20:60.20:779,60,0	1/1:2,29:31:3.46:998,3,0	1/1:2,19:21:54.15:682,54,0	1/1:0,23:23:66.21:857,66,0
chr10	5969670	.	ATG	A	12860.19	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=13.212;DP=584;FS=4.074;HRun=0;HaplotypeScore=127.2222;InbreedingCoeff=0.9985;MQ=88.59;MQ0=1;MQRankSum=-8.513;QD=43.89;ReadPosRankSum=3.254;VQSLOD=6.3174;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,26:26:69.23:1105,69,0	0/0:7,0:7:21.07:0,21,389	0/0:29,0:29:87.27:0,87,1663	0/0:21,0:21:60.14:0,60,1061	0/0:12,0:12:36.12:0,36,731	1/1:0,13:13:33.11:519,33,0	1/1:0,30:30:84.29:1370,84,0	1/1:0,22:22:66.21:1052,66,0	1/1:0,13:13:36.12:587,36,0	0/0:17,0:17:51.17:0,51,986	0/0:8,0:8:24.07:0,24,452	0/0:24,0:24:72.25:0,72,1456	0/0:27,0:27:81.26:0,81,1593	0/0:32,0:32:96.29:0,96,1874	1/1:0,28:28:72.25:1174,72,0	1/1:0,20:20:57.19:930,57,0	1/1:0,33:33:81.27:1322,81,0	0/0:22,0:22:66.23:0,66,1329	1/1:0,13:13:39.12:609,39,0	1/1:0,21:21:63.21:1008,63,0	0/0:46,0:46:99:0,135,2673	1/1:0,16:16:42.14:685,42,0	0/0:13,0:13:39.12:0,39,756	0/0:33,0:33:99:0,99,1960	1/1:0,16:16:45.15:724,45,0	1/1:0,12:12:36.12:585,36,0	1/1:0,21:21:54.18:858,54,0	1/1:1,8:8:21.07:332,21,0
chr10	5970119	.	C	CATAA	18434.56	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-9.005;DP=835;FS=2.723;HRun=0;HaplotypeScore=200.3378;InbreedingCoeff=0.9983;MQ=85.84;MQ0=0;MQRankSum=-7.412;QD=60.64;ReadPosRankSum=1.086;VQSLOD=5.3825;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:57:99:0,163,3020	1/1:0,6:6:18.06:486,18,0	0/0:30,0:30:81.23:0,81,1449	0/0:28,0:29:71.92:0,72,1314	1/1:5,30:35:86.95:1859,87,0	0/0:28,0:28:84.25:0,84,1499	0/0:28,0:28:78.22:0,78,1384	0/0:29,0:29:81.27:0,81,1489	0/0:35,0:35:96.33:0,96,1812	1/1:8,28:39:99:2710,108,0	1/1:2,16:20:57.11:1375,57,0	1/1:6,21:28:78.16:1846,78,0	1/1:4,22:28:69.17:1710,69,0	1/1:5,27:33:87.26:2267,87,0	0/0:40,0:40:99:0,105,1941	0/0:41,0:41:99:0,123,2324	0/0:21,0:21:63.18:0,63,1136	1/1:1,24:25:69.19:1802,69,0	0/0:34,0:34:99:0,99,1815	0/0:24,0:24:60.21:0,60,1138	1/1:5,30:36:87.13:2095,87,0	0/0:27,0:27:75.23:0,75,1360	1/1:6,19:26:53.89:1233,54,0	1/1:6,21:28:39.29:1053,39,0	0/0:26,0:26:75.23:0,75,1360	0/0:35,1:36:24.31:0,24,1783	0/0:37,0:36:87.24:0,87,1571	0/0:9,0:9:24.08:0,24,456
chr10	5972813	.	AG	A	741.74	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.684;DP=735;FS=1.679;HRun=4;HaplotypeScore=159.8163;InbreedingCoeff=0.9975;MQ=81.73;MQ0=0;MQRankSum=-8.129;QD=23.93;ReadPosRankSum=2.363;VQSLOD=2.2031;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,25:31:72.13:837,72,0	0/0:9,0:9:24.08:0,24,336	0/0:22,0:22:57.17:0,57,761	0/0:22,0:22:59.46:0,59,729	0/0:22,0:22:63.18:0,63,837	0/0:23,0:23:69.23:0,69,966	0/0:23,0:23:66.22:0,66,920	0/0:30,0:30:87.28:0,87,1203	0/0:33,0:33:99:0,99,1378	0/0:30,0:30:87.28:0,87,1201	0/0:27,0:27:75.24:0,75,1033	0/0:35,0:35:99:0,102,1426	0/0:36,0:36:99:0,102,1424	0/0:34,0:34:99:0,99,1380	0/0:51,0:51:99:0,151,2101	0/0:28,0:28:81.26:0,81,1118	0/0:24,0:24:69.21:0,69,948	0/0:19,0:19:54.16:0,54,735	0/0:21,0:21:63.19:0,63,848	0/0:21,0:21:63.20:0,63,865	0/0:41,0:41:99:0,111,1554	0/0:23,0:23:69.23:0,69,959	0/0:18,0:18:51.16:0,51,696	0/0:37,0:37:99:0,105,1448	0/0:17,0:17:51.17:0,51,714	0/0:26,0:26:75.25:0,75,1050	0/0:22,0:22:66.22:0,66,923	0/0:10,0:10:30.10:0,30,420
chr10	5973357	.	TA	T	9396.28	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=12.086;DP=697;FS=1.643;HRun=8;HaplotypeScore=69.8112;InbreedingCoeff=0.9995;MQ=79.46;MQ0=0;MQRankSum=-2.876;QD=25.26;ReadPosRankSum=0.333;VQSLOD=5.5840;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,44:45:99:1274,132,0	0/0:14,0:14:42.13:0,42,507	0/0:25,0:26:38.51:0,39,513	0/0:17,0:17:26.56:0,27,322	0/0:35,0:35:96.26:0,96,1130	1/1:2,25:27:72.11:695,72,0	1/1:2,18:20:51.08:493,51,0	1/1:3,22:25:66.05:628,66,0	1/1:0,24:24:66.11:637,66,0	0/0:23,0:23:60.18:0,60,725	0/0:14,0:14:39.11:0,39,460	0/0:34,0:34:96.28:0,96,1147	0/0:41,0:41:99:0,108,1280	0/0:36,0:36:99:0,99,1196	1/1:3,22:25:63.10:608,63,0	1/1:3,19:22:51.08:493,51,0	1/1:1,26:27:78.12:753,78,0	0/0:24,0:24:72.22:0,72,870	1/1:3,21:24:63.09:608,63,0	1/1:4,20:24:57.08:550,57,0	0/0:20,0:20:54.17:0,54,651	1/1:3,21:24:57.09:549,57,0	0/0:18,0:18:45.14:0,45,543	0/0:23,0:23:69.21:0,69,834	1/1:1,15:16:42.07:406,42,0	1/1:4,19:23:23.85:514,24,0	1/1:1,32:33:87.14:839,87,0	1/1:0,13:13:36.06:348,36,0
chr10	5974558	.	TACACACACACAC	T	6230.16	PASS	AB=0.603;AC=20;AF=0.370;AN=54;BaseQRankSum=-1.099;DP=785;FS=15.976;HRun=0;HaplotypeScore=234.6879;InbreedingCoeff=0.7353;MQ=56.10;MQ0=3;MQRankSum=-3.983;QD=18.27;ReadPosRankSum=3.583;VQSLOD=2.4783;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:45:28.73:0,29,1300	1/1:3,7:10:9.03:318,9,0	0/0:17,0:7:5.95:0,6,42	./.	1/1:7,21:28:12.98:427,13,0	0/0:10,0:24:18.05:0,18,624	0/0:16,0:48:16.85:0,17,592	0/0:26,0:25:36.12:0,36,843	0/0:4,0:23:18.79:0,19,256	1/1:6,24:30:58.94:1355,59,0	1/1:4,12:17:7.91:215,8,0	1/1:6,24:30:20.87:674,21,0	1/1:9,21:30:5.13:889,5,0	1/1:12,34:47:29.89:1054,30,0	0/0:5,0:20:8.58:0,9,129	0/0:6,0:29:17.98:0,18,535	0/0:13,0:29:11.48:0,11,478	0/1:10,22:33:28.80:766,0,29	0/0:24,0:24:44.49:0,44,1459	0/0:5,0:27:2.95:0,3,304	1/1:22,44:66:2.19:106,2,0	0/0:13,0:30:26.33:0,26,379	1/1:5,15:21:13.45:426,13,0	0/1:11,18:29:0.15:1,0,0	0/0:5,0:24:12.04:0,12,390	0/0:8,0:29:63.21:0,63,1833	0/0:10,0:21:18.04:0,18,549	0/0:9,0:8:7.27:0,7,241
chr10	5976773	.	TG	T	13459.29	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=6.295;DP=744;FS=5.489;HRun=3;HaplotypeScore=157.1187;InbreedingCoeff=1.0000;MQ=85.99;MQ0=0;MQRankSum=-3.678;QD=32.83;ReadPosRankSum=2.223;VQSLOD=3.6511;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,52:54:99:1818,147,0	0/0:19,0:19:57.19:0,57,793	0/0:23,0:23:66.19:0,66,919	0/0:29,0:29:84.27:0,84,1184	0/0:24,0:24:69.23:0,69,963	1/1:2,14:16:42.13:521,42,0	1/1:1,37:38:99:1264,102,0	1/1:4,27:31:78.23:954,78,0	1/1:1,18:19:54.17:669,54,0	0/0:29,0:29:84.25:0,84,1147	0/0:23,0:23:63.21:0,63,883	0/0:30,0:30:90.28:0,90,1220	0/0:22,0:22:66.14:0,66,871	0/0:34,0:34:96.30:0,96,1294	1/1:2,35:37:99:1227,99,0	1/1:1,24:25:69.22:855,69,0	1/1:3,33:36:84.18:1035,84,0	0/0:23,0:23:69.13:0,69,920	1/1:2,23:25:66.19:804,66,0	1/1:1,16:17:42.13:520,42,0	0/0:36,0:36:99:0,102,1421	1/1:2,23:25:69.22:855,69,0	0/0:18,0:18:51.17:0,51,707	0/0:24,0:24:66.22:0,66,917	1/1:1,24:25:66.21:818,66,0	1/1:2,17:19:51.16:632,51,0	1/1:2,24:26:69.22:855,69,0	1/1:0,17:17:51.16:632,51,0
chr10	5977130	.	GAGAGGTC	G	10166.35	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=9.990;DP=693;FS=9.204;HRun=0;HaplotypeScore=179.8809;InbreedingCoeff=0.9999;MQ=79.02;MQ0=2;MQRankSum=-15.918;QD=53.51;ReadPosRankSum=2.341;VQSLOD=4.4143;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,114,4203	0/0:19,0:19:54.17:0,54,1928	0/0:44,0:40:88.10:0,88,3363	0/0:61,0:52:97.16:0,97,3647	0/0:24,0:24:69.24:0,69,2585	1/1:0,21:21:51.08:1322,51,0	1/1:5,20:25:42.14:1089,42,0	0/0:28,0:28:78.25:0,78,2583	1/1:2,15:17:45.15:1167,45,0	0/0:26,0:26:75.26:0,75,2829	0/0:17,0:17:51.16:0,51,1882	0/0:16,0:16:45.15:0,45,1734	0/0:22,0:22:66.23:0,66,2524	0/0:27,0:27:78.25:0,78,2907	1/1:4,17:20:42.14:1089,42,0	1/1:2,23:24:57.15:1416,57,0	0/0:42,0:42:99:0,123,4682	0/0:24,0:24:66.10:0,66,2496	1/1:2,18:20:54.15:1244,54,0	1/1:1,16:17:39.09:953,39,0	0/0:24,0:24:63.20:0,63,2421	1/1:0,20:20:33.07:798,33,0	0/0:18,0:18:54.17:0,54,1888	0/0:23,0:23:63.22:0,63,2368	1/1:3,21:24:42.14:1089,42,0	0/0:22,0:22:66.23:0,66,2591	0/0:13,0:13:39.12:0,39,1394	0/0:11,0:11:33.11:0,33,1211
chr10	5978507	.	A	AGACTCG	49627.62	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-2.011;DP=680;FS=0.000;HRun=0;HaplotypeScore=174.2461;InbreedingCoeff=0.9893;MQ=74.42;MQ0=0;MQRankSum=-10.887;QD=78.40;ReadPosRankSum=3.479;VQSLOD=5.6321;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:13,25:42:75.17:2423,75,0	1/1:8,0:8:24.08:805,24,0	0/0:22,0:22:59.95:0,60,1219	0/0:25,0:25:69.20:0,69,1462	1/1:32,0:33:50.63:1553,51,0	1/1:4,12:20:39.13:1391,39,0	1/1:8,14:23:51.18:1837,51,0	1/1:17,12:32:93.29:2787,93,0	1/1:7,19:28:69.24:2396,69,0	1/1:26,0:26:75.26:2297,75,0	1/1:26,0:26:60.19:1943,60,0	1/1:14,0:14:36.12:1161,36,0	1/1:32,0:33:96.29:2987,96,0	1/1:35,0:35:99:3274,102,0	1/1:6,22:31:72.25:2539,72,0	1/1:8,27:36:98.86:3472,99,0	1/1:6,14:24:39.13:1402,39,0	1/1:13,0:13:33.11:1146,33,0	1/1:13,10:25:72.22:2286,72,0	1/1:6,13:25:39.13:1401,39,0	1/1:24,0:24:41.68:1465,42,0	1/1:7,13:22:35.92:1252,36,0	1/1:23,0:23:66.23:2368,66,0	1/1:14,0:14:23.97:860,24,0	1/1:4,10:16:33.11:1202,33,0	1/1:11,19:36:99:3255,105,0	1/1:6,11:18:45.15:1578,45,0	1/1:1,5:6:15.05:548,15,0
chr10	5978508	.	G	GA	7270.50	PASS	AB=1.000;AC=51;AF=0.911;AN=56;BaseQRankSum=11.149;DP=560;FS=0.512;HRun=1;HaplotypeScore=239.4055;InbreedingCoeff=0.7530;MQ=79.99;MQ0=0;MQRankSum=-11.656;QD=14.17;ReadPosRankSum=7.641;VQSLOD=4.2673;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:33,0:33:54.52:232,55,0	1/1:0,7:8:23.89:197,24,0	0/0:22,0:22:62.78:0,63,769	0/0:25,0:25:72.17:0,72,941	1/1:5,20:28:10.28:342,10,0	1/1:15,0:15:30.35:136,30,0	1/1:18,0:18:41.97:194,42,0	1/1:21,0:21:18.20:170,18,0	1/1:25,0:25:35.04:235,35,0	1/1:1,16:19:53.86:481,54,0	1/1:3,17:25:39.18:445,39,0	1/1:0,9:11:29.90:252,30,0	1/1:2,24:29:67.99:649,68,0	1/1:1,27:35:98.79:778,99,0	1/1:25,0:25:61.55:285,62,0	1/1:32,0:32:60.02:362,60,0	1/1:17,0:17:33.46:153,33,0	1/1:1,10:12:15.17:263,15,0	0/1:20,0:20:12.37:142,0,12	1/1:15,0:15:33.22:151,33,0	1/1:2,13:19:35.92:301,36,0	1/1:14,0:14:27.98:129,28,0	1/1:0,22:23:65.43:524,65,0	1/1:0,13:13:30.09:222,30,0	1/1:13,0:13:30.42:136,30,0	1/1:23,0:23:15.03:273,15,0	1/1:14,0:14:31.47:152,31,0	1/1:6,0:6:13.99:65,14,0
chr10	5978509	.	C	CTCGGT	26430.14	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=7.514;DP=593;FS=0.575;HRun=0;HaplotypeScore=218.8949;InbreedingCoeff=0.9890;MQ=77.31;MQ0=0;MQRankSum=-11.165;QD=48.32;ReadPosRankSum=4.895;VQSLOD=4.7944;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:34,0:34:60.41:855,60,0	1/1:2,7:9:27.08:651,27,0	0/0:21,0:21:57.15:0,57,1163	0/0:25,0:25:72.20:0,72,1421	1/1:12,21:33:57.17:1318,57,0	1/1:14,0:14:36.12:559,36,0	1/1:18,0:18:24.18:676,24,0	1/1:23,0:23:31.90:734,32,0	1/1:25,0:25:38.22:903,38,0	1/1:9,16:25:72.20:1786,72,0	1/1:10,17:28:69.12:1496,69,0	1/1:5,9:14:42:968,42,0	1/1:9,25:34:99:2355,99,0	1/1:11,27:38:99:2550,114,0	1/1:25,0:25:66.22:1039,66,0	1/1:32,0:32:92.81:1404,93,0	1/1:17,0:17:36.12:556,36,0	1/1:3,10:13:39.05:914,39,0	1/1:20,0:20:60.18:853,60,0	1/1:15,0:15:36.12:569,36,0	1/1:9,13:22:45.15:1160,45,0	1/1:14,0:14:30.57:478,31,0	1/1:3,20:25:69.07:1664,69,0	1/1:1,13:14:26.95:654,27,0	1/1:13,0:13:33.11:510,33,0	1/1:22,0:22:65.86:952,66,0	1/1:14,0:14:39.13:598,39,0	1/1:6,0:6:15.05:227,15,0
chr10	5978903	.	G	GTTTATTTA	22691.75	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=5.475;DP=624;FS=15.334;HRun=0;HaplotypeScore=253.2432;InbreedingCoeff=0.9680;MQ=53.46;MQ0=1;MQRankSum=-15.011;QD=63.38;ReadPosRankSum=-0.707;VQSLOD=3.1035;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,14:23:27.09:1115,27,0	0/0:7,0:7:15.05:0,15,400	0/0:14,0:13:24.07:0,24,531	0/0:18,0:18:5.65:0,6,832	0/0:28,0:28:75.23:0,75,1799	1/1:16,5:21:50.97:1579,51,0	1/1:8,8:16:27.09:1111,27,0	1/1:15,12:32:54.11:1234,54,0	1/1:14,3:17:39.01:1193,39,0	0/0:26,0:26:72.24:0,72,1760	0/0:33,0:33:87.18:0,87,2152	0/0:26,0:26:69.15:0,69,1585	0/0:15,0:15:45.12:0,45,1083	0/0:22,0:22:60.18:0,60,1413	1/1:20,5:25:66.16:2257,66,0	1/1:22,9:31:75.15:2471,75,0	1/1:3,7:12:21.07:799,21,0	0/0:22,0:22:63.20:0,63,1575	1/1:17,6:22:33.07:1103,33,0	1/1:25,4:29:69.22:2088,69,0	0/0:13,0:13:39.12:0,39,952	1/1:19,0:19:39.04:1040,39,0	0/0:32,0:32:87.23:0,87,2077	0/0:10,0:10:27.08:0,27,657	1/1:37,2:39:84.22:2733,84,0	1/1:8,22:31:11.16:1928,11,0	1/1:12,17:35:39.13:1657,39,0	1/1:1,3:4:9.03:383,9,0
chr10	5978914	.	T	TA	1711.30	PASS	AB=0.845;AC=13;AF=0.232;AN=56;BaseQRankSum=15.812;DP=593;FS=10.331;HRun=0;HaplotypeScore=246.9252;InbreedingCoeff=-0.2925;MQ=56.28;MQ0=1;MQRankSum=-14.536;QD=6.36;ReadPosRankSum=5.978;VQSLOD=1.8167;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:19,0:19:14.12:14,0,217	0/0:7,0:7:21.06:0,21,277	0/0:19,0:18:45.14:0,45,614	0/0:16,0:16:44.63:0,45,570	0/0:31,0:31:93.30:0,93,1275	0/1:15,7:22:99:166,0,157	0/1:12,0:12:22.21:22,0,50	0/0:23,0:23:37.92:0,38,602	0/1:11,5:16:99:124,0,171	0/0:29,0:29:87.29:0,87,1216	0/0:36,0:36:99:0,99,1364	0/0:26,0:26:78.25:0,78,1074	0/0:17,0:17:45.15:0,45,628	0/0:23,0:23:69.20:0,69,917	0/1:12,12:24:36.88:315,0,37	0/1:17,9:26:28.14:326,0,28	0/0:14,0:14:13.88:0,14,240	0/0:27,0:27:81.19:0,81,1045	0/1:14,1:15:56.24:56,0,119	0/1:17,10:27:99:286,0,188	0/0:15,0:15:45.14:0,45,614	0/1:13,5:18:99:115,0,200	0/0:31,0:31:93.29:0,93,1266	0/0:10,0:10:30.09:0,30,403	0/1:11,20:31:99:398,0,123	0/1:24,0:24:14.02:14,0,201	0/1:30,0:30:22.20:22,0,216	0/1:5,0:5:4.14:4,0,72
chr10	5978915	.	TGCTG	T	2835.52	PASS	AB=0.774;AC=9;AF=0.161;AN=56;BaseQRankSum=14.210;DP=589;FS=7.579;HRun=0;HaplotypeScore=273.8617;InbreedingCoeff=-0.2028;MQ=56.20;MQ0=1;MQRankSum=-11.296;QD=14.77;ReadPosRankSum=5.545;VQSLOD=2.0763;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:2.79:0,3,901	0/0:7,0:7:21.07:0,21,590	0/0:19,0:18:51.16:0,51,1278	0/1:16,0:16:9.97:10,0,1052	0/0:31,0:31:93.30:0,93,2515	0/1:15,7:22:99:290,0,367	0/0:12,0:12:7.52:0,8,348	0/0:24,0:24:61.32:0,61,1672	0/1:11,5:16:99:229,0,220	0/0:30,0:30:90.31:0,90,2511	0/0:35,0:35:99:0,99,2691	0/0:26,0:26:78.25:0,78,2089	0/0:17,0:17:51.18:0,51,1394	0/0:22,0:22:66.23:0,66,1857	0/1:12,12:24:99:521,0,191	0/1:15,9:24:99:397,0,432	0/0:14,0:14:30.10:0,30,768	0/0:26,0:26:78.27:0,78,2143	0/1:14,1:15:44.72:45,0,679	0/1:16,10:26:99:483,0,248	0/0:15,0:15:45.15:0,45,1273	0/1:13,5:18:99:244,0,180	0/0:30,0:30:90.31:0,90,2530	0/0:10,0:10:30.10:0,30,844	0/1:11,20:31:99:755,0,120	0/0:24,0:24:66.21:0,66,1623	0/0:30,0:30:60.21:0,60,1461	0/0:5,0:5:15.05:0,15,382
chr10	5978933	.	TGTATCTTGTTTTACATTTTC	T	22305.61	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=16.454;DP=636;FS=1.144;HRun=0;HaplotypeScore=382.4913;InbreedingCoeff=0.9920;MQ=63.37;MQ0=0;MQRankSum=-14.676;QD=114.98;ReadPosRankSum=8.304;VQSLOD=3.5264;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:38.71:0,39,2558	0/0:8,0:8:21.07:0,21,1829	0/0:16,0:16:48.16:0,48,3321	0/0:15,0:15:45.11:0,45,1782	0/0:34,0:34:99:0,102,8359	1/1:7,12:20:51.18:2813,51,0	1/1:0,9:9:12.04:690,12,0	0/0:34,0:34:96.31:0,96,5997	1/1:5,10:15:39.13:2171,39,0	0/0:36,0:36:99:0,105,8988	0/0:31,0:31:90.31:0,90,7783	0/0:23,0:23:69.24:0,69,6402	0/0:22,0:22:66.21:0,66,4922	0/0:21,0:21:63.20:0,63,5689	1/1:12,14:26:51.18:2797,51,0	1/1:9,14:23:42.14:2266,42,0	0/0:17,0:17:39.13:0,39,2940	0/0:27,0:27:81.28:0,81,7153	1/1:1,14:15:39.57:1170,40,0	1/1:10,17:27:63.17:3324,63,0	0/0:18,0:18:54.19:0,54,4494	1/1:5,20:25:57.01:2552,57,0	0/0:28,0:28:84.29:0,84,7655	0/0:18,0:18:54.19:0,54,4396	1/1:20,14:34:84.29:4523,84,0	0/0:33,0:33:93.79:0,94,6923	0/0:33,0:33:69.24:0,69,4952	0/0:5,0:5:15.05:0,15,1267
chr10	5978934	.	GTATC	G	4567.17	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=17.247;DP=637;FS=1.652;HRun=0;HaplotypeScore=252.6986;InbreedingCoeff=0.9821;MQ=64.04;MQ0=0;MQRankSum=-16.162;QD=23.54;ReadPosRankSum=9.488;VQSLOD=3.5072;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:22.96:0,23,908	0/0:8,0:8:21.07:0,21,578	0/0:16,0:16:48.16:0,48,1281	0/0:15,0:15:42.09:0,42,884	0/0:33,0:33:99:0,99,2648	1/1:13,7:20:50.88:546,51,0	1/1:9,0:9:12:108,12,0	0/0:34,0:34:96.31:0,96,2528	1/1:10,5:15:39.09:440,39,0	0/0:37,0:37:99:0,108,2862	0/0:31,0:31:90.31:0,90,2451	0/0:23,0:23:69.24:0,69,1930	0/0:22,0:22:63.22:0,63,1703	0/0:20,0:20:60.21:0,60,1678	1/1:14,12:26:51.14:635,51,0	1/1:14,9:23:42.12:520,42,0	0/0:17,0:17:39.13:0,39,1087	0/0:27,0:27:78.22:0,78,2118	1/1:14,1:15:8.85:99,9,0	1/1:17,10:27:60.10:688,60,0	0/0:18,0:18:51.17:0,51,1426	1/1:20,5:25:45.03:484,45,0	0/0:29,0:29:87.30:0,87,2386	0/0:18,0:18:54.19:0,54,1494	1/1:14,20:34:84.22:1047,84,0	0/0:34,0:34:93.32:0,93,2545	0/0:34,0:34:72.25:0,72,1935	0/0:5,0:5:15.05:0,15,419
chr10	5978947	.	CA	C	3789.14	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=17.591;DP=655;FS=1.158;HRun=1;HaplotypeScore=216.5308;InbreedingCoeff=0.9925;MQ=72.85;MQ0=0;MQRankSum=-16.626;QD=19.53;ReadPosRankSum=7.643;VQSLOD=3.3912;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:24:56.78:0,57,836	0/0:10,0:10:30.10:0,30,476	0/0:20,0:20:46.19:0,46,756	0/0:16,0:16:45.01:0,45,642	0/0:30,0:30:90.19:0,90,1357	1/1:13,7:20:47.74:457,48,0	1/1:9,0:9:11.03:66,11,0	0/0:34,0:34:99:0,99,1444	1/1:10,5:15:35.54:298,36,0	0/0:38,0:38:99:0,114,1792	0/0:29,0:29:87.28:0,87,1360	0/0:25,0:25:75.25:0,75,1185	0/0:22,0:22:66.21:0,66,1025	0/0:21,0:21:63.18:0,63,959	1/1:14,12:26:49.41:542,49,0	1/1:14,9:23:40.50:430,40,0	0/0:17,0:17:39.13:0,39,609	0/0:30,0:30:87.25:0,87,1339	1/1:14,1:15:27.54:317,28,0	1/1:17,10:27:52.89:494,53,0	0/0:16,0:16:48.16:0,48,767	1/1:20,5:25:40.54:357,41,0	0/0:31,0:31:93.32:0,93,1482	0/0:23,0:23:69.18:0,69,1073	1/1:14,20:34:80.06:828,80,0	0/0:33,0:33:93.31:0,93,1434	0/0:35,0:35:72.23:0,72,1101	0/0:6,0:6:18.06:0,18,275
chr10	5979614	.	C	CTCTG	22190.71	PASS	AB=0.555;AC=50;AF=0.893;AN=56;BaseQRankSum=3.731;DP=684;FS=6.795;HRun=0;HaplotypeScore=161.6232;InbreedingCoeff=0.5883;MQ=67.51;MQ0=4;MQRankSum=-7.761;QD=34.62;ReadPosRankSum=5.429;VQSLOD=4.4337;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:5,14:19:0.55:272,0,1	1/1:2,12:14:2.41:77,2,0	0/0:29,0:28:65.75:0,66,1060	0/0:14,0:14:25.31:0,25,382	1/1:31,2:33:66.17:1375,66,0	1/1:24,2:26:60.19:1286,60,0	1/1:1,17:18:12.04:304,12,0	1/1:44,0:44:99:2220,108,0	1/1:5,19:24:24.08:591,24,0	1/1:30,0:30:68.86:1128,69,0	1/1:23,1:25:47.69:1049,48,0	1/1:26,0:26:34.21:1033,34,0	0/1:3,20:23:7.45:60,0,7	1/1:8,19:27:8.57:210,9,0	1/1:25,1:26:63.22:1457,63,0	1/1:22,1:23:63.22:1419,63,0	1/1:7,4:11:30.07:571,30,0	1/1:2,12:14:14.88:303,15,0	1/1:15,0:15:42.13:820,42,0	1/1:35,1:36:99:2369,105,0	1/1:5,17:22:12.02:229,12,0	1/1:3,20:23:12.04:300,12,0	1/1:25,3:29:60.75:1869,61,0	1/1:2,16:18:6.02:147,6,0	1/1:4,31:35:18.06:445,18,0	1/1:6,22:29:63.20:1312,63,0	1/1:2,38:38:33.10:768,33,0	1/1:11,0:10:27.09:578,27,0
chr10	5979618	.	GTCTA	G	16279.45	PASS	AB=1.000;AC=51;AF=0.911;AN=56;BaseQRankSum=2.868;DP=665;FS=10.500;HRun=0;HaplotypeScore=180.5528;InbreedingCoeff=0.5591;MQ=62.87;MQ0=6;MQRankSum=-7.196;QD=25.96;ReadPosRankSum=7.872;VQSLOD=3.3742;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:20,0:20:6.15:202,0,6	1/1:15,0:15:1.70:51,2,0	0/0:27,0:26:64.72:0,65,1185	0/0:11,0:10:25.31:0,25,397	1/1:12,21:33:51.31:950,51,0	1/1:4,21:25:57.20:1007,57,0	1/1:16,1:17:12.04:209,12,0	1/1:7,37:43:85.60:1514,86,0	1/1:18,4:22:24.08:423,24,0	1/1:8,20:28:4.61:850,5,0	1/1:4,20:24:38.95:754,39,0	1/1:4,20:24:48.22:803,48,0	1/1:22,0:22:3.79:48,4,0	1/1:24,1:25:8.53:158,9,0	1/1:2,24:26:63.22:1108,63,0	1/1:2,20:22:63.22:1097,63,0	1/1:11,2:13:20.38:350,20,0	1/1:13,1:14:14.41:211,14,0	1/1:5,10:15:21.06:552,21,0	1/1:6,30:36:99:1744,102,0	1/1:20,1:21:4.34:116,4,0	1/1:22,1:23:12.04:225,12,0	1/1:9,22:31:83.29:1426,83,0	1/1:20,0:20:6.02:111,6,0	1/1:30,3:33:18.06:315,18,0	1/1:24,2:26:59.81:1057,60,0	1/1:35,2:35:30.10:537,30,0	1/1:1,10:10:27.09:460,27,0
chr10	5979708	.	CTATG	C	11072.90	PASS	AB=0.979;AC=49;AF=0.875;AN=56;BaseQRankSum=-1.977;DP=609;FS=1.958;HRun=0;HaplotypeScore=191.7347;InbreedingCoeff=0.4831;MQ=50.70;MQ0=14;MQRankSum=2.716;QD=19.70;ReadPosRankSum=0.217;VQSLOD=4.5368;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:25:41:311,41,0	1/1:9,0:9:17.91:148,18,0	0/0:20,0:9:26.74:0,27,233	0/0:27,0:15:21.34:0,21,284	1/1:29,0:28:39.18:324,39,0	1/1:20,0:20:38.94:339,39,0	1/1:21,0:17:38.90:318,39,0	1/1:33,0:32:83.79:599,84,0	0/1:17,0:17:99:191,0,123	1/1:30,0:30:47.02:595,47,0	1/1:24,0:24:51.21:398,51,0	1/1:32,0:32:71.39:620,71,0	1/1:23,0:23:57.56:530,58,0	1/1:22,0:22:33.84:309,34,0	1/1:21,2:23:48.33:537,48,0	1/1:20,3:23:63.01:717,63,0	1/1:16,0:16:8.69:71,9,0	1/1:14,1:15:36.30:315,36,0	1/1:18,0:17:50.81:464,51,0	0/1:26,0:26:99:300,0,150	1/1:11,0:11:17.92:142,18,0	1/1:28,6:34:90.01:1042,90,0	1/1:22,0:22:32.63:317,33,0	1/1:13,0:13:17.79:136,18,0	1/1:21,9:30:86.98:1137,87,0	0/1:14,1:15:14.94:269,0,15	1/1:25,2:27:71.96:812,72,0	1/1:3,1:4:9.03:134,9,0
chr10	5979711	.	TGTAC	T	10970.60	PASS	AB=1.000;AC=45;AF=0.804;AN=56;BaseQRankSum=-1.260;DP=584;FS=8.943;HRun=0;HaplotypeScore=178.1563;InbreedingCoeff=0.4707;MQ=52.85;MQ0=12;MQRankSum=-0.187;QD=21.18;ReadPosRankSum=1.274;VQSLOD=3.9770;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,4:23:31.31:465,31,0	1/1:7,0:7:17.99:232,18,0	0/0:20,0:9:27.09:0,27,489	0/0:29,0:17:35.40:0,35,740	1/1:26,0:25:46.62:641,47,0	0/1:20,0:20:15.83:16,0,59	0/1:20,0:17:22.58:23,0,51	1/1:5,24:29:81.28:878,81,0	0/0:17,0:17:19.15:0,19,235	1/1:24,0:24:69.56:1030,70,0	1/1:20,0:20:57.06:812,57,0	1/1:30,0:30:76.40:963,76,0	1/1:20,3:23:65.12:889,65,0	1/1:19,0:19:49.35:584,49,0	0/1:23,0:23:9.75:130,0,10	0/1:22,0:22:1.32:164,0,1	1/1:2,13:15:10.96:111,11,0	1/1:17,0:17:44.38:564,44,0	1/1:19,0:18:14.78:75,15,0	0/1:25,0:25:11.21:11,0,275	1/1:11,0:11:18.06:285,18,0	1/1:34,0:34:38.04:333,38,0	1/1:21,0:21:40.68:520,41,0	1/1:13,0:13:17.27:231,17,0	1/1:31,0:31:42.80:433,43,0	1/1:14,1:15:37.42:555,37,0	1/1:23,3:26:72.11:896,72,0	1/1:5,0:5:12.01:132,12,0
chr10	5980945	.	GTATA	G	1000.29	PASS	AB=0.952;AC=25;AF=0.481;AN=52;BaseQRankSum=-1.119;DP=246;FS=50.521;HRun=0;HaplotypeScore=73.5028;InbreedingCoeff=0.5530;MQ=75.12;MQ0=1;MQRankSum=0.131;QD=14.93;ReadPosRankSum=3.088;VQSLOD=0.8746;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	1/1:1,4:5:12:179,12,0	0/0:16,0:10:4.51:0,5,30	0/0:22,0:11:2.87:0,3,30	1/1:0,4:4:11.94:116,12,0	0/0:12,0:12:33.11:0,33,834	0/0:5,0:5:12.04:0,12,281	0/0:42,0:42:99:0,99,1620	0/0:8,0:8:15.03:0,15,306	1/1:1,4:5:12.04:211,12,0	1/1:3,3:6:6.02:106,6,0	1/1:0,3:3:9.03:159,9,0	1/1:1,1:2:3.01:53,3,0	1/1:0,1:1:2.97:20,3,0	0/0:8,0:8:15.01:0,15,278	0/0:8,0:8:21.07:0,21,529	0/0:7,0:20:42.80:0,43,223	1/1:0,5:5:9:127,9,0	0/0:15,0:15:36.12:0,36,906	0/0:6,0:6:9.03:0,9,231	1/1:0,3:3:2.89:53,3,0	./.	1/1:1,4:5:5.89:73,6,0	1/1:3,0:3:3:27,3,0	0/0:11,0:11:27.09:0,27,648	0/1:5,1:6:41:41,0,67	0/1:9,0:9:7.70:8,0,141	0/1:10,0:10:10.15:10,0,84
chr10	5980951	.	ATATATATT	A	194.80	PASS	AB=0.861;AC=4;AF=0.080;AN=50;BaseQRankSum=4.024;DP=227;FS=0.000;HRun=0;HaplotypeScore=91.7763;InbreedingCoeff=-0.0673;MQ=74.86;MQ0=2;MQRankSum=1.353;QD=2.91;ReadPosRankSum=-0.949;VQSLOD=1.6090;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	0/0:5,0:5:9.01:0,9,84	0/1:21,0:13:7.48:7,0,73	0/0:25,0:12:3.69:0,4,13	0/0:4,0:4:3:0,3,28	0/0:12,0:12:33.11:0,33,1162	0/0:6,0:6:15.04:0,15,466	0/1:35,0:35:58.52:59,0,486	0/0:7,0:7:15.04:0,15,508	0/0:4,0:4:10.83:0,11,89	0/0:4,0:4:6.01:0,6,56	0/0:3,0:3:9.01:0,9,84	0/0:1,0:1:3:0,3,28	./.	0/0:6,0:6:9.03:0,9,390	0/0:8,0:8:21.07:0,21,742	0/0:22,0:21:41.97:0,42,734	0/0:6,0:6:6.01:0,6,56	0/0:16,0:16:45.15:0,45,1551	0/0:3,0:3:9.03:0,9,390	0/0:3,0:3:5.22:0,5,35	./.	0/0:4,0:4:3:0,3,28	0/0:1,0:1:0:0,0,0	0/0:10,0:10:30.09:0,30,934	0/0:6,0:6:5.48:0,5,39	0/1:5,2:7:50.74:127,0,51	0/1:2,2:4:39.14:102,0,39
chr10	5980958	.	TTTATATATGTATGTATGTATATGCATGTA	T	2820.31	PASS	AB=1.000;AC=7;AF=0.146;AN=48;BaseQRankSum=6.705;DP=229;FS=6.599;HRun=0;HaplotypeScore=170.2361;InbreedingCoeff=0.5195;MQ=77.23;MQ0=2;MQRankSum=-2.115;QD=62.67;ReadPosRankSum=-0.307;VQSLOD=2.5393;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/0:4,0:4:9.03:0,9,499	0/0:25,0:13:18.63:0,19,393	0/0:31,0:14:2.19:0,2,120	0/0:4,0:4:3.01:0,3,120	0/0:14,0:14:39.12:0,39,2720	0/0:6,0:6:18.05:0,18,954	1/1:0,31:31:92.66:1483,93,0	0/0:7,0:7:21.06:0,21,1519	0/0:4,0:4:12.04:0,12,674	0/0:3,0:3:6.02:0,6,484	0/0:3,0:3:9.03:0,9,485	0/0:1,0:1:3.01:0,3,143	./.	0/0:4,0:4:12.04:0,12,1140	0/0:9,0:9:24.08:0,24,1654	0/0:21,0:20:27.15:0,27,2806	0/0:6,0:6:6.02:0,6,255	0/0:16,0:16:48.16:0,48,3541	0/0:3,0:3:9.03:0,9,939	0/0:3,0:3:2.96:0,3,225	./.	0/0:4,0:4:3.01:0,3,144	./.	0/0:12,0:12:36.11:0,36,2559	0/1:3,0:3:92.84:290,0,93	1/1:7,0:7:21.06:658,21,0	1/1:4,0:4:12.04:525,12,0
chr10	5980967	.	GTATGTATGTATATGCATGTAGTATATA	G	1561.39	PASS	AB=1.000;AC=7;AF=0.146;AN=48;BaseQRankSum=6.291;DP=240;FS=3.728;HRun=0;HaplotypeScore=171.3794;InbreedingCoeff=0.5457;MQ=74.88;MQ0=4;MQRankSum=-5.981;QD=32.53;ReadPosRankSum=0.769;VQSLOD=2.6304;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:4,0:4:9.03:0,9,443	0/0:31,0:13:14.57:0,15,366	0/0:34,0:14:11.91:0,12,188	0/0:1,0:1:3.01:0,3,94	0/0:13,0:13:33.10:0,33,2415	0/0:6,0:6:18.05:0,18,954	1/1:32,0:32:59.51:517,60,0	0/0:7,0:7:21.07:0,21,1562	0/0:4,0:4:12.02:0,12,593	0/0:3,0:3:6.02:0,6,442	0/0:3,0:3:9.03:0,9,443	0/0:1,0:1:3.01:0,3,121	./.	0/0:6,0:6:18.06:0,18,1382	0/0:8,0:8:21.04:0,21,1309	0/0:22,0:21:42.14:0,42,3004	0/0:5,0:5:6.01:0,6,214	0/0:17,0:17:45.15:0,45,3171	0/0:3,0:3:9.03:0,9,740	0/0:3,0:3:2.19:0,2,211	./.	0/0:2,0:2:3.01:0,3,129	./.	0/0:13,0:13:36.12:0,36,2769	0/1:4,0:4:62.80:296,0,63	1/1:4,2:6:17.74:463,18,0	1/1:4,2:6:11.90:421,12,0
chr10	5980979	.	ATGCATGTAG	A	412.16	PASS	AB=0.800;AC=7;AF=0.140;AN=50;BaseQRankSum=5.282;DP=224;FS=4.922;HRun=0;HaplotypeScore=103.7546;InbreedingCoeff=0.4287;MQ=82.27;MQ0=5;MQRankSum=-4.043;QD=9.81;ReadPosRankSum=1.749;VQSLOD=1.9139;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:2,0:2:6.02:0,6,243	0/0:34,0:14:15.81:0,16,282	0/0:35,0:14:18.77:0,19,213	0/0:1,0:1:3.01:0,3,50	0/0:11,0:11:27.09:0,27,899	0/0:8,0:8:21.05:0,21,618	1/1:31,1:32:8.51:126,9,0	0/0:10,0:10:30.10:0,30,924	0/0:3,0:3:9.03:0,9,371	0/0:3,0:3:6.02:0,6,253	0/0:2,0:2:6.02:0,6,239	0/0:1,0:1:3.01:0,3,74	./.	0/0:8,0:8:24.08:0,24,776	0/0:7,0:7:18.06:0,18,585	0/0:19,0:18:39.11:0,39,1449	0/0:3,0:3:3.01:0,3,118	0/0:15,0:15:45.15:0,45,1485	0/0:3,0:3:9.03:0,9,355	0/0:1,0:1:3.01:0,3,121	0/0:1,0:1:3.01:0,3,85	0/0:1,0:1:3.01:0,3,74	./.	0/0:13,0:13:39.13:0,39,1236	0/1:3,1:4:12.96:186,0,13	1/1:2,0:2:6.02:116,6,0	1/1:2,2:4:6.02:106,6,0
chr10	5981360	.	T	TG	8669.24	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-18.375;DP=754;FS=2.496;HRun=4;HaplotypeScore=68.2064;InbreedingCoeff=0.9998;MQ=82.93;MQ0=0;MQRankSum=-2.703;QD=36.27;ReadPosRankSum=0.823;VQSLOD=5.1089;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:78.21:0,78,885	0/0:14,0:14:42.10:0,42,466	0/0:26,0:26:69.14:0,69,756	0/0:16,0:16:44.71:0,45,478	0/0:35,0:35:99:0,102,1138	1/1:0,23:23:63.21:862,63,0	1/1:6,30:36:90.30:1231,90,0	0/0:40,0:40:99:0,102,1150	1/1:0,28:28:81.27:1108,81,0	0/0:30,0:30:90.25:0,90,1014	0/0:21,0:21:60.17:0,60,680	0/0:18,0:18:51.15:0,51,579	0/0:36,0:36:99:0,99,1121	0/0:30,0:30:84.22:0,84,942	1/1:2,28:30:81.27:1108,81,0	1/1:3,25:28:72.24:983,72,0	0/0:29,0:29:84.24:0,84,953	0/0:15,0:15:45.09:0,45,496	1/1:5,18:23:54.16:716,54,0	1/1:1,17:18:48.16:657,48,0	0/0:33,0:33:93.23:0,93,1041	1/1:3,22:25:66.22:897,66,0	0/0:17,0:17:51.13:0,51,569	0/0:36,0:36:99:0,105,1191	1/1:1,27:28:81.27:1108,81,0	0/0:38,0:38:99:0,111,1260	0/0:41,0:41:99:0,117,1315	0/0:10,0:10:27.08:0,27,306
chr10	5981814	.	TG	T	17188.49	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=0.692;DP=789;FS=3.826;HRun=4;HaplotypeScore=89.7202;InbreedingCoeff=0.9999;MQ=85.77;MQ0=0;MQRankSum=-4.222;QD=31.20;ReadPosRankSum=5.341;VQSLOD=5.0362;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,117,1620	1/1:0,12:12:33.10:396,33,0	0/0:29,0:29:81.26:0,81,1106	0/0:20,0:20:54.12:0,54,698	1/1:0,24:24:69.21:825,69,0	1/1:1,18:19:51.16:612,51,0	1/1:4,22:26:60.18:720,60,0	0/0:34,0:34:87.29:0,87,1215	1/1:0,26:26:69.21:828,69,0	1/1:2,27:29:84.19:958,84,0	1/1:1,19:20:48.15:576,48,0	1/1:2,22:24:60.18:720,60,0	1/1:5,38:43:99:1188,99,0	1/1:2,33:35:84.26:1008,84,0	1/1:2,46:48:99:1440,120,0	1/1:1,33:34:96.29:1152,96,0	0/0:25,0:25:72.22:0,72,989	1/1:1,15:16:42.13:502,42,0	1/1:4,24:28:72.22:863,72,0	1/1:0,26:26:66.20:792,66,0	1/1:1,44:45:99:1404,117,0	1/1:2,22:24:60.18:720,60,0	1/1:2,14:16:45.14:539,45,0	1/1:1,32:33:96.29:1152,96,0	1/1:1,22:23:66.20:792,66,0	0/0:29,1:30:51.27:0,51,1118	0/0:29,0:29:78.25:0,78,1075	0/0:28,0:28:84.28:0,84,1176
chr10	5982321	.	AT	A	9429.27	PASS	AB=0.533;AC=47;AF=0.839;AN=56;BaseQRankSum=-6.714;DP=480;FS=1.146;HRun=9;HaplotypeScore=92.6717;InbreedingCoeff=0.9010;MQ=65.35;MQ0=0;MQRankSum=-0.463;QD=23.22;ReadPosRankSum=0.967;VQSLOD=5.2588;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:46.18:0,46,253	1/1:1,9:10:27.01:247,27,0	0/0:19,0:13:26.68:0,27,276	0/0:11,0:9:17.29:0,17,195	1/1:2,27:29:71.99:651,72,0	1/1:2,18:20:53.98:486,54,0	1/1:3,10:13:30.01:275,30,0	1/1:3,29:32:87:785,87,0	1/1:0,10:10:27.01:247,27,0	1/1:2,28:30:84.04:769,84,0	1/1:3,17:20:47.94:428,48,0	1/1:1,14:15:36.02:329,36,0	1/1:0,14:14:41.99:377,42,0	1/1:1,8:9:24.01:220,24,0	1/1:1,17:18:44.93:395,45,0	1/1:4,14:18:42.01:384,42,0	0/0:1,0:24:59.66:0,60,303	1/1:2,14:16:39.02:357,39,0	1/1:4,12:16:33.01:302,33,0	1/1:2,18:20:54.03:494,54,0	1/1:1,3:4:9:82,9,0	1/1:0,10:10:27.01:247,27,0	1/1:2,10:12:27.01:247,27,0	0/1:1,7:8:1.13:144,0,1	1/1:3,18:21:54.02:494,54,0	1/1:5,26:31:78.02:708,78,0	1/1:1,23:24:66:596,66,0	1/1:0,6:6:18.01:165,18,0
chr10	5982330	.	T	TA	596.39	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-1.998;DP=488;FS=7.720;HRun=1;HaplotypeScore=116.5057;InbreedingCoeff=0.9740;MQ=60.36;MQ0=0;MQRankSum=3.395;QD=13.25;ReadPosRankSum=1.467;VQSLOD=2.4314;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,19:20:42.14:584,42,0	0/0:9,0:9:26.12:0,26,147	0/0:19,0:11:16.77:0,17,292	0/0:14,0:12:20.28:0,20,252	0/0:29,0:29:75.66:0,76,437	0/0:20,0:20:55.30:0,55,321	0/0:12,0:12:35.02:0,35,212	0/0:33,0:33:87.33:0,87,521	0/0:11,0:11:29.09:0,29,167	0/0:32,0:32:89.80:0,90,522	0/0:17,0:17:49.50:0,50,291	0/0:15,0:15:34.83:0,35,196	0/0:18,0:18:49.64:0,50,297	0/0:10,0:10:29.18:0,29,175	0/0:20,0:20:52.58:0,53,316	0/0:16,0:15:46.59:0,47,270	1/1:25,0:25:23.84:134,24,0	0/0:16,0:16:43.73:0,44,259	0/0:14,0:14:34.93:0,35,208	0/0:22,0:22:58.24:0,58,343	0/0:5,0:5:14.70:0,15,100	0/0:11,0:11:26.12:0,26,146	0/0:11,0:11:29.10:0,29,168	0/0:9,0:9:23.42:0,23,152	0/0:19,0:19:55.22:0,55,316	0/0:28,0:28:78.44:0,78,453	0/0:27,0:27:75.82:0,76,446	0/0:6,0:6:17.42:0,17,98
chr10	5984087	.	C	CA	13956.56	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-4.331;DP=469;FS=0.000;HRun=6;HaplotypeScore=41.0932;InbreedingCoeff=0.8431;MQ=65.10;MQ0=0;MQRankSum=-4.529;QD=30.74;ReadPosRankSum=2.893;VQSLOD=4.9853;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,12:13:30.10:377,30,0	1/1:0,9:9:24.08:302,24,0	0/0:5,0:5:12.01:0,12,116	0/0:9,0:8:2.04:0,2,80	1/1:2,34:36:87.28:1089,87,0	1/1:0,23:23:66.21:826,66,0	1/1:3,12:15:30.10:377,30,0	1/1:3,30:33:90.28:1119,90,0	1/1:2,13:15:39.12:490,39,0	1/1:2,22:24:69.21:851,69,0	1/1:2,16:18:39.12:490,39,0	1/1:1,13:14:33.11:415,33,0	1/1:1,14:15:36.12:453,36,0	1/1:3,11:14:30.10:375,30,0	1/1:1,13:14:36.12:453,36,0	1/1:1,17:18:51.16:641,51,0	1/1:1,12:13:27.09:340,27,0	1/1:1,14:15:33.11:415,33,0	1/1:1,11:12:33.11:415,33,0	1/1:4,23:27:60.19:755,60,0	1/1:2,9:11:18.06:221,18,0	1/1:1,12:13:24.08:302,24,0	1/1:1,20:21:51.16:641,51,0	1/1:1,5:6:15.05:189,15,0	1/1:3,20:23:54.17:679,54,0	1/1:7,17:24:57.16:693,57,0	1/1:3,20:23:69.22:859,69,0	1/1:0,5:5:15.05:189,15,0
chr10	5984154	.	GA	G	2143.14	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=4.444;DP=508;FS=18.575;HRun=7;HaplotypeScore=60.5125;InbreedingCoeff=0.9805;MQ=76.46;MQ0=0;MQRankSum=-1.649;QD=26.14;ReadPosRankSum=0.424;VQSLOD=2.0837;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:39.12:0,39,491	0/0:6,0:6:15.05:0,15,189	0/0:17,0:17:29.05:0,29,398	0/0:7,0:7:15.05:0,15,188	0/0:38,0:38:99:0,102,1259	0/0:29,0:29:72.23:0,72,906	0/0:16,0:16:36.12:0,36,453	1/1:2,25:27:75.15:758,75,0	0/0:17,0:17:48.14:0,48,591	0/0:33,0:33:90.28:0,90,1120	0/0:19,0:19:42.13:0,42,527	0/0:12,0:12:30.10:0,30,374	0/0:17,0:17:45.14:0,45,566	0/0:16,0:16:45.14:0,45,566	0/0:18,0:18:51.15:0,51,629	0/0:25,0:25:66.21:0,66,830	0/0:15,0:15:33.06:0,33,397	0/0:14,0:14:36.11:0,36,447	0/0:17,0:17:48.15:0,48,603	0/0:18,0:18:51.16:0,51,641	0/0:12,0:12:30.10:0,30,377	0/0:10,0:10:27.09:0,27,339	0/0:26,0:26:66.13:0,66,794	0/0:8,0:8:21.07:0,21,264	0/0:21,0:21:51.16:0,51,642	1/1:1,25:26:40.40:717,40,0	1/1:2,23:25:69.16:704,69,0	1/1:0,4:4:12.03:122,12,0
chr10	5984978	.	T	TC	1816.78	PASS	AB=0.882;AC=31;AF=0.554;AN=56;BaseQRankSum=-6.441;DP=436;FS=6.815;HRun=9;HaplotypeScore=70.4767;InbreedingCoeff=0.5930;MQ=65.46;MQ0=16;MQRankSum=-1.081;QD=7.27;ReadPosRankSum=-4.901;VQSLOD=0.3790;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:23,1:22:32.85:225,33,0	1/1:5,0:5:3.01:33,3,0	0/0:21,0:6:11.99:0,12,101	0/0:19,0:12:26.83:0,27,215	1/1:16,2:18:14.87:150,15,0	0/0:15,0:15:20.96:0,21,182	0/0:27,0:26:43.77:0,44,370	0/1:15,0:15:0.04:0,0,0	0/0:15,0:15:11.78:0,12,102	0/1:15,1:16:34.58:106,0,35	0/1:10,2:12:1.99:194,0,2	1/1:19,1:20:14.21:299,14,0	0/1:7,7:14:18.49:18,0,20	1/1:11,2:13:3.99:217,4,0	0/0:15,0:15:17.93:0,18,156	0/0:23,0:23:20.72:0,21,159	1/1:5,13:18:11.95:106,12,0	1/1:7,0:7:3.48:34,3,0	0/0:14,0:14:29.98:0,30,260	0/0:23,0:22:32.90:0,33,282	1/1:10,7:17:19.19:157,19,0	0/1:16,1:17:10.08:10,0,148	1/1:5,3:8:9.02:100,9,0	1/1:14,4:18:18.02:182,18,0	0/0:13,0:13:17.96:0,18,156	1/1:12,0:11:11.64:92,12,0	1/1:13,0:13:11.72:75,12,0	1/1:3,0:2:2.88:15,3,0
chr10	5984988	.	G	GTGTGTGTGTGTGTA	4171.69	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-5.361;DP=466;FS=4.385;HRun=0;HaplotypeScore=187.0256;InbreedingCoeff=0.7661;MQ=55.43;MQ0=21;MQRankSum=0.205;QD=19.87;ReadPosRankSum=2.465;VQSLOD=2.2733;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:17:3.95:0,4,100	0/0:5,0:5:2.99:0,3,24	0/0:19,0:4:3:0,3,28	0/0:17,0:10:12:0,12,123	0/0:15,0:15:11.97:0,12,240	1/1:22,0:21:17.83:476,18,0	1/1:28,0:25:43.17:481,43,0	0/0:3,0:3:1.55:0,2,4	1/1:16,0:16:10.58:406,11,0	0/0:16,0:16:14.66:0,15,177	0/0:13,0:13:9.02:0,9,227	0/0:19,0:19:27.04:0,27,629	1/1:12,0:12:3.01:38,3,0	0/0:17,0:16:30.03:0,30,633	1/1:13,0:12:8.98:74,9,0	1/1:11,12:25:15.20:960,15,0	0/0:13,0:13:11.91:0,12,336	0/0:10,0:10:9.06:0,9,63	1/1:22,0:21:28.43:325,28,0	1/1:22,0:21:17.68:327,18,0	0/0:25,0:23:6.90:0,7,121	1/1:30,0:30:15.47:393,15,0	0/0:12,0:12:17.99:0,18,429	0/0:17,0:17:8.49:0,8,214	1/1:19,0:18:20.61:692,21,0	0/0:19,0:18:18.20:0,18,245	0/0:12,0:12:8.52:0,9,331	0/0:5,0:4:3.01:0,3,101
chr10	5985000	.	G	GTA	563.08	PASS	AB=0.970;AC=9;AF=0.161;AN=56;BaseQRankSum=2.621;DP=460;FS=10.894;HRun=0;HaplotypeScore=91.1163;InbreedingCoeff=-0.1796;MQ=45.28;MQ0=23;MQRankSum=2.757;QD=3.03;ReadPosRankSum=3.757;VQSLOD=0.8381;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:26:47.41:0,47,337	0/0:5,0:5:8.98:0,9,72	0/0:14,0:1:3:0,3,28	0/0:16,0:6:15:0,15,149	0/0:14,0:14:17.97:0,18,150	0/1:20,0:19:9.20:82,0,9	0/1:32,0:29:99:190,0,151	0/0:8,0:8:21.14:0,21,146	0/1:10,6:16:30.83:31,0,37	0/0:17,0:17:48.41:0,48,349	0/0:10,0:10:11.99:0,12,105	0/0:16,0:16:35.97:0,36,321	0/0:16,0:16:13.72:0,14,93	0/0:20,0:19:41.93:0,42,352	0/1:13,0:12:15.92:60,0,16	0/1:24,0:23:42.85:43,0,58	0/0:15,0:15:22.35:0,22,152	0/0:10,0:10:17.74:0,18,120	0/1:16,0:14:77.58:78,0,99	0/1:19,0:18:26.96:104,0,27	0/0:20,0:18:15.42:0,15,119	0/1:29,0:29:60.27:87,0,60	0/0:12,0:12:26.91:0,27,218	0/0:13,0:13:17.56:0,18,157	0/1:17,0:16:28.98:29,0,37	0/0:17,0:16:44.44:0,44,313	0/0:17,0:17:27.38:0,27,236	0/0:6,0:5:14.96:0,15,118
chr10	5987345	.	G	GA	1180.47	PASS	AB=0.832;AC=21;AF=0.375;AN=56;BaseQRankSum=-0.806;DP=424;FS=2.740;HRun=12;HaplotypeScore=86.9915;InbreedingCoeff=0.2300;MQ=53.55;MQ0=7;MQRankSum=-5.594;QD=5.18;ReadPosRankSum=-1.173;VQSLOD=2.0678;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:28,2:30:27.39:27,0,133	0/1:3,2:5:9.93:66,0,10	0/0:14,0:6:4.65:0,5,27	0/0:8,0:5:7.72:0,8,44	1/1:16,6:21:14.98:136,15,0	0/0:12,0:12:20.84:0,21,153	0/0:17,1:21:5.88:0,6,179	0/0:26,1:27:8.35:0,8,207	0/0:9,0:9:8.89:0,9,66	1/1:16,11:26:17.06:308,17,0	0/1:13,3:16:17:17,0,35	1/1:8,5:13:14.94:127,15,0	1/1:8,1:9:5.39:70,5,0	1/1:8,5:13:9.01:88,9,0	0/0:8,0:8:5.93:0,6,44	0/0:14,0:15:24.40:0,24,163	0/1:10,3:12:28.84:63,0,29	0/1:15,9:24:7.78:248,0,8	0/0:16,0:15:12.10:0,12,152	0/0:18,0:18:26.78:0,27,195	1/1:8,2:10:6.90:60,7,0	0/0:7,0:9:18.97:0,19,120	0/1:9,2:11:9.95:61,0,10	0/1:5,5:10:9.01:65,0,9	0/0:14,0:12:26.80:0,27,195	0/0:21,0:21:7.25:0,7,125	0/1:13,1:14:9.28:9,0,92	0/1:9,0:7:15.29:15,0,32
chr10	5987365	.	T	TAAA	10182.44	PASS	AB=1.000;AC=54;AF=0.964;AN=56;BaseQRankSum=-2.585;DP=426;FS=10.386;HRun=9;HaplotypeScore=69.2323;InbreedingCoeff=0.0027;MQ=55.71;MQ0=4;MQRankSum=-2.689;QD=23.90;ReadPosRankSum=0.517;VQSLOD=2.0290;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,4:27:36.12:559,36,0	1/1:4,0:6:12.01:151,12,0	0/1:16,0:7:16.36:16,0,65	0/1:12,0:7:9.57:10,0,105	1/1:14,0:25:45.13:609,45,0	1/1:1,14:16:24.08:473,24,0	1/1:6,13:20:30.08:555,30,0	1/1:8,25:36:81.24:1440,81,0	1/1:2,7:9:15.01:257,15,0	1/1:14,1:25:36.11:510,36,0	1/1:7,0:14:21.07:298,21,0	1/1:4,0:9:9.03:129,9,0	1/1:4,0:6:6.02:86,6,0	1/1:6,0:10:6.02:86,6,0	1/1:1,6:7:6.02:118,6,0	1/1:5,7:13:15.05:296,15,0	1/1:7,0:13:15.05:215,15,0	1/1:11,1:26:43.39:618,43,0	1/1:6,13:19:48.10:813,48,0	1/1:1,10:13:30.03:478,30,0	1/1:2,0:5:8.99:101,9,0	1/1:9,3:12:14.92:178,15,0	1/1:4,0:9:12.04:172,12,0	1/1:5,3:12:15.05:239,15,0	1/1:4,12:14:33.11:624,33,0	1/1:7,16:23:51.15:877,51,0	1/1:6,7:14:2.93:60,3,0	1/1:3,4:5:12.04:217,12,0
chr10	5987545	.	TACACACACACACACACACAC	T	1822.23	PASS	AB=0.782;AC=26;AF=0.520;AN=50;BaseQRankSum=0.006;DP=551;FS=17.127;HRun=0;HaplotypeScore=225.3573;InbreedingCoeff=0.3686;MQ=52.54;MQ0=8;MQRankSum=-0.671;QD=6.22;ReadPosRankSum=-0.981;VQSLOD=1.1063;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:28:4.94:0,5,65	1/1:8,0:8:9.02:159,9,0	0/0:28,0:18:2.22:0,2,7	0/0:40,0:23:0:0,0,0	0/1:15,6:21:0:0,0,0	0/1:21,0:19:17.30:73,0,17	1/1:25,0:25:8.15:142,8,0	0/0:36,0:36:9.03:0,9,233	0/1:8,6:14:31.50:104,0,31	1/1:13,8:21:20.75:432,21,0	1/1:9,12:22:0.14:1,0,0	1/1:9,12:21:8.60:390,9,0	1/1:7,0:8:3.01:46,3,0	0/1:10,10:21:2.32:96,0,2	0/1:6,11:17:0:0,0,0	1/1:5,9:15:3.01:89,3,0	0/0:11,0:10:0.47:0,0,1	1/1:5,5:8:3.01:57,3,0	0/1:19,1:19:2.30:261,0,2	1/1:9,5:14:0.47:1,0,0	1/1:34,0:31:9:111,9,0	0/0:4,5:10:0.47:0,0,1	./.	./.	./.	0/0:16,0:24:34.81:0,35,1320	0/0:10,0:16:17.96:0,18,317	0/0:9,0:8:14.85:0,15,328
chr10	5990123	.	TACACACACACACAC	T	1763.05	PASS	AB=0.831;AC=23;AF=0.442;AN=52;BaseQRankSum=6.621;DP=568;FS=3.544;HRun=0;HaplotypeScore=176.8456;InbreedingCoeff=0.2021;MQ=57.16;MQ0=31;MQRankSum=-5.163;QD=5.98;ReadPosRankSum=-0.782;VQSLOD=2.7815;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:28:6.02:0,6,121	0/0:9,0:9:5.38:0,5,62	./.	./.	0/1:16,0:16:21.53:22,0,62	1/1:17,5:23:6.02:234,6,0	0/0:21,0:17:0.88:0,1,2	0/0:19,0:18:8.52:0,9,148	1/1:13,11:24:10.76:357,11,0	0/1:24,0:28:41.11:41,0,212	1/1:5,0:10:0.47:1,0,0	0/1:17,0:21:65.96:66,0,84	0/1:11,0:17:36.65:37,0,45	1/1:10,0:16:11:70,11,0	1/1:9,10:19:9.03:294,9,0	1/1:14,8:22:7.53:347,8,0	0/1:16,0:21:18.86:19,0,107	0/1:18,0:17:35.77:36,0,196	1/1:13,0:12:10.08:131,10,0	1/1:10,4:14:5.02:66,5,0	0/0:27,0:23:9.90:0,10,101	0/0:13,13:25:0.47:0,0,1	0/0:11,0:15:3.01:0,3,37	0/0:18,0:23:3.48:0,3,38	0/1:15,8:19:25.41:205,0,25	0/0:21,0:23:30.10:0,30,787	0/0:13,0:15:15.05:0,15,591	0/0:3,0:5:9.03:0,9,220
chr10	5991356	.	C	CCACACACACACACA	3162.25	PASS	AB=0.977;AC=38;AF=0.731;AN=52;BaseQRankSum=-2.136;DP=578;FS=5.140;HRun=0;HaplotypeScore=241.6570;InbreedingCoeff=0.1479;MQ=63.10;MQ0=14;MQRankSum=-0.222;QD=6.44;ReadPosRankSum=-1.288;VQSLOD=2.1034;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:34,0:34:0:0,0,0	1/1:7,0:7:2.96:20,3,0	./.	./.	0/1:14,0:14:0:0,0,0	1/1:16,2:19:10.75:395,11,0	1/1:33,0:32:3.46:25,3,0	1/1:25,0:23:19.91:160,20,0	1/1:28,0:24:11.51:234,12,0	1/1:21,0:20:21.07:753,21,0	1/1:15,0:15:3.01:121,3,0	0/1:26,0:26:11.70:219,0,12	1/1:23,0:23:4.56:137,5,0	1/1:22,0:21:3.90:90,4,0	0/1:12,0:12:0:0,0,0	1/1:15,0:14:6.06:33,6,0	0/1:26,0:26:99:356,0,135	1/1:11,0:11:11.82:290,12,0	1/1:13,0:13:3.01:162,3,0	0/1:14,2:17:0:0,0,0	1/1:23,0:22:2.69:8,3,0	0/1:20,0:21:0:0,0,0	0/0:13,0:13:3:0,3,27	0/1:29,0:28:35.83:73,0,36	1/1:23,2:27:2.64:195,3,0	0/1:12,0:11:14:14,0,142	0/1:17,0:17:3.44:3,0,325	0/0:8,0:7:7:0,7,333
chr10	5991394	.	ACACACGCGCGCG	A	4333.18	PASS	AB=0.958;AC=20;AF=0.370;AN=54;BaseQRankSum=9.636;DP=517;FS=27.999;HRun=0;HaplotypeScore=177.7077;InbreedingCoeff=0.1389;MQ=38.98;MQ0=19;MQRankSum=-5.800;QD=16.05;ReadPosRankSum=3.037;VQSLOD=2.5122;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:24:1.72:4,2,0	1/1:9,0:8:6.02:144,6,0	./.	0/0:8,0:1:2.80:0,3,13	1/1:11,0:11:1.24:3,1,0	0/0:25,0:25:36.59:0,37,1195	0/0:33,0:30:49.17:0,49,1365	0/1:31,0:29:99:1153,0,268	0/0:19,0:16:11.49:0,11,329	0/1:20,0:19:99:350,0,296	0/0:14,0:13:6:0,6,61	1/1:29,0:27:13.09:492,13,0	0/1:19,0:18:24.10:249,0,24	0/1:23,0:20:32.43:124,0,32	0/0:17,0:17:23.99:0,24,798	0/0:11,0:10:8.65:0,9,278	1/1:19,0:19:18.48:454,18,0	0/1:11,0:11:99:158,0,187	0/0:12,0:12:24.76:0,25,548	0/0:15,0:15:9.50:0,10,326	0/0:21,0:16:2.32:0,2,22	0/0:21,0:21:21.54:0,22,679	1/1:15,0:15:2.88:78,3,0	0/0:21,0:19:3.01:0,3,47	0/0:28,0:27:26.74:0,27,986	0/1:25,0:23:12.96:851,0,13	0/1:18,0:18:99:164,0,178	0/1:8,8:15:99:108,0,147
chr10	5991398	.	ACGCGCGCGCGCGCGCG	A	5218.18	PASS	AB=0.726;AC=28;AF=0.538;AN=52;BaseQRankSum=3.843;DP=519;FS=0.563;HRun=0;HaplotypeScore=197.6395;InbreedingCoeff=0.4082;MQ=40.65;MQ0=18;MQRankSum=-7.600;QD=16.16;ReadPosRankSum=-0.369;VQSLOD=3.8237;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:10,13:23:1.72:4,2,0	1/1:4,4:7:6.02:267,6,0	./.	0/0:4,0:1:3.01:0,3,93	1/1:6,5:11:1.25:3,1,0	0/0:27,0:27:38.20:0,38,2235	0/0:33,0:30:22.15:0,22,2769	0/1:13,0:29:99:183,0,358	0/1:19,0:16:27.32:27,0,424	1/1:9,10:18:35.14:1136,35,0	./.	1/1:9,19:26:24.08:1082,24,0	1/1:8,10:17:12.04:552,12,0	1/1:6,17:20:9.03:332,9,0	0/0:15,0:15:20.40:0,20,1376	0/1:12,0:11:15.17:15,0,601	1/1:8,11:19:22.43:958,22,0	1/1:5,7:12:13.14:435,13,0	0/0:15,0:15:33.35:0,33,1516	0/0:19,0:19:18.53:0,19,1120	1/1:12,7:14:0.89:2,1,0	0/0:23,0:23:27.07:0,27,1635	1/1:5,12:17:3.01:127,3,0	0/1:6,15:19:0:0,0,0	0/0:31,0:30:34.88:0,35,2339	0/1:8,0:22:36.83:37,0,493	0/1:3,0:19:59.71:60,0,241	0/0:14,0:15:4.19:0,4,285
chr10	5991399	.	CGCGCGCGCGCGCGCGCACACAG	C	4916.76	PASS	AB=1.000;AC=26;AF=0.500;AN=52;BaseQRankSum=3.394;DP=406;FS=0.000;HRun=0;HaplotypeScore=190.8800;InbreedingCoeff=0.5622;MQ=43.73;MQ0=17;MQRankSum=-7.360;QD=25.61;ReadPosRankSum=-0.756;VQSLOD=3.1145;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:13:1.72:4,2,0	1/1:4,0:3:6.02:298,6,0	./.	0/0:3,0:1:3.01:0,3,88	1/1:5,0:5:1.25:3,1,0	0/0:22,0:22:38.03:0,38,2686	0/0:30,0:27:22.91:0,23,3246	0/1:30,0:28:33.44:33,0,551	0/1:14,0:11:44.35:44,0,523	1/1:10,0:10:29.13:1143,29,0	./.	1/1:20,0:18:24.08:981,24,0	1/1:10,0:9:12.04:622,12,0	1/1:18,0:15:9.03:367,9,0	0/0:11,0:11:19.31:0,19,1684	0/1:10,0:10:11.68:12,0,904	1/1:11,0:11:21.07:884,21,0	1/1:7,0:7:9.03:385,9,0	0/0:15,0:15:35.54:0,36,1897	0/0:17,0:17:21.04:0,21,1323	1/1:13,0:8:0.89:2,1,0	0/0:21,0:21:25.63:0,26,1921	1/1:12,0:12:3.48:139,3,0	0/1:15,0:14:0:0,0,0	0/0:30,0:29:36.77:0,37,2927	0/0:23,0:22:10.11:0,10,1005	0/0:19,0:19:11.71:0,12,468	0/0:16,0:15:12.38:0,12,448
chr10	5991417	.	CACAG	C	502.54	PASS	AB=0.944;AC=17;AF=0.315;AN=54;BaseQRankSum=9.408;DP=483;FS=33.277;HRun=0;HaplotypeScore=140.9788;InbreedingCoeff=0.3743;MQ=52.13;MQ0=9;MQRankSum=-7.551;QD=3.12;ReadPosRankSum=3.514;VQSLOD=0.7243;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:16:0.46:1,0,0	0/1:4,1:4:17.01:50,0,17	0/0:6,0:6:18.06:0,18,380	0/0:15,0:10:16.15:0,16,391	1/1:9,0:9:1.25:3,1,0	0/0:25,0:25:51.11:0,51,1285	0/0:24,0:22:48.64:0,49,1272	0/0:29,0:28:77.81:0,78,1125	0/0:19,0:17:33.11:0,33,811	0/1:17,0:17:91:91,0,128	./.	1/1:22,0:21:23.66:171,24,0	1/1:12,1:12:11.74:72,12,0	0/1:19,0:17:16.08:31,0,16	0/0:17,0:17:42.14:0,42,1037	0/0:11,0:11:27.04:0,27,611	0/1:16,1:16:16.58:136,0,17	1/1:10,0:10:4.11:66,4,0	0/0:19,0:19:57.08:0,57,1101	0/0:21,0:21:48.64:0,49,1149	1/1:17,0:14:0.94:2,1,0	0/0:18,0:18:42.14:0,42,1095	0/1:15,1:16:17.99:33,0,18	0/0:25,1:25:1.36:0,1,3	0/0:30,0:29:48.10:0,48,1272	0/0:21,0:20:43.19:0,43,727	0/0:23,0:23:9.82:0,10,504	0/0:10,0:10:8.92:0,9,66
chr10	5991419	.	CAG	C	730.70	PASS	AC=24;AF=0.444;AN=54;BaseQRankSum=9.006;DP=488;FS=45.210;HRun=0;HaplotypeScore=130.2722;InbreedingCoeff=0.8112;MQ=53.51;MQ0=7;MQRankSum=-7.445;QD=3.97;ReadPosRankSum=2.200;VQSLOD=1.3577;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:16:0.46:1,0,0	1/1:5,0:4:5.44:47,5,0	0/0:7,0:7:21:0,21,257	0/0:15,0:10:15.92:0,16,255	1/1:9,0:9:1.25:3,1,0	0/0:25,0:25:50.76:0,51,863	0/0:23,0:21:48.16:0,48,889	0/0:30,0:29:80.69:0,81,896	0/0:20,0:18:39.10:0,39,591	1/1:17,0:17:13.15:123,13,0	./.	1/1:18,3:20:26.72:200,27,0	1/1:12,0:11:14.74:96,15,0	1/1:19,0:17:7.40:51,7,0	0/0:17,0:17:42.09:0,42,700	0/0:11,0:11:27.02:0,27,422	1/1:17,1:17:28.89:205,29,0	1/1:10,0:10:19.05:126,19,0	0/0:21,0:21:62.61:0,63,807	0/0:21,0:21:48.59:0,49,753	1/1:16,0:14:2.97:20,3,0	0/0:20,0:20:48.13:0,48,814	1/1:15,1:16:3:28,3,0	1/1:23,2:24:0.66:20,1,0	0/0:30,1:30:47.79:0,48,897	0/0:21,0:21:45.15:0,45,601	0/0:23,1:24:25.67:0,26,362	0/0:10,0:10:8.68:0,9,51
chr10	5992791	.	GA	G	12656.11	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=12.887;DP=681;FS=1.589;HRun=1;HaplotypeScore=72.1698;InbreedingCoeff=0.9972;MQ=91.27;MQ0=0;MQRankSum=-2.978;QD=37.67;ReadPosRankSum=5.322;VQSLOD=5.2255;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,30:31:84.28:1174,84,0	1/1:0,13:13:35.75:499,36,0	0/0:24,0:24:60.25:0,60,1032	0/0:32,0:32:93.23:0,93,1405	1/1:0,21:21:53.97:716,54,0	0/0:19,0:19:57.18:0,57,888	0/0:40,0:40:99:0,120,1879	0/0:30,0:30:90.31:0,90,1437	0/0:22,0:22:66.21:0,66,1024	1/1:0,17:17:51.17:713,51,0	1/1:0,24:24:60.13:805,60,0	1/1:0,25:25:69.23:963,69,0	1/1:0,32:32:93.31:1298,93,0	1/1:0,22:22:63.21:878,63,0	0/0:28,0:28:81.75:0,82,1293	0/0:21,0:21:63.20:0,63,983	1/1:0,23:23:60.20:839,60,0	1/1:0,39:39:99:1468,105,0	0/0:25,0:25:75.26:0,75,1192	0/0:16,0:16:48.16:0,48,761	1/1:0,42:42:99:1467,105,0	0/0:13,0:13:36.12:0,36,547	1/1:0,13:13:32.85:461,33,0	1/1:0,34:34:99:1376,99,0	0/0:19,0:19:57.19:0,57,896	0/0:20,1:21:21.23:0,21,873	0/0:30,0:29:90.31:0,90,1424	0/0:5,0:5:15.05:0,15,240
chr10	5992966	.	A	AT	10384.37	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-11.968;DP=676;FS=3.891;HRun=5;HaplotypeScore=68.7528;InbreedingCoeff=0.9995;MQ=89.71;MQ0=0;MQRankSum=-2.301;QD=33.28;ReadPosRankSum=2.574;VQSLOD=5.4606;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,34:34:99:1302,99,0	1/1:1,8:9:24.08:316,24,0	0/0:27,0:27:69.13:0,69,710	0/0:24,0:24:54.11:0,54,559	1/1:2,27:29:78.17:987,78,0	0/0:25,0:25:72.17:0,72,766	0/0:21,0:21:57.12:0,57,605	0/0:36,0:36:93.22:0,93,992	0/0:22,0:22:66.15:0,66,701	1/1:6,20:26:60.17:773,60,0	1/1:1,17:18:51.12:652,51,0	1/1:1,20:21:57.19:750,57,0	1/1:2,26:28:66.21:868,66,0	1/1:5,18:23:63.15:789,63,0	0/0:19,0:19:54.14:0,54,580	0/0:22,0:22:51.11:0,51,541	1/1:4,32:36:96.31:1263,96,0	1/1:3,21:24:60.20:789,60,0	0/0:19,0:19:45.10:0,45,476	0/0:31,0:31:84.19:0,84,895	1/1:1,14:15:36.12:474,36,0	0/0:22,0:22:57.12:0,57,603	1/1:3,23:26:57.19:750,57,0	1/1:2,21:23:51.17:671,51,0	0/0:32,0:32:84.21:0,84,903	0/0:23,1:24:26.66:0,27,628	0/0:28,0:27:75.15:0,75,787	0/0:12,0:12:36.09:0,36,387
chr10	5995245	.	AT	A	5610.21	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-7.719;DP=597;FS=3.256;HRun=9;HaplotypeScore=140.5862;InbreedingCoeff=0.9719;MQ=77.90;MQ0=1;MQRankSum=-1.194;QD=22.81;ReadPosRankSum=0.846;VQSLOD=3.3742;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,123,1408	0/0:11,0:11:30.08:0,30,337	0/0:18,1:17:4.16:0,4,208	0/0:17,0:16:31.08:0,31,301	0/0:24,0:24:69.20:0,69,793	1/1:1,30:31:84.05:768,84,0	1/1:1,17:18:42.02:384,42,0	1/1:8,14:22:38.97:346,39,0	1/1:0,16:16:45.02:412,45,0	0/0:22,0:22:66.16:0,66,735	0/0:16,0:16:39.12:0,39,450	0/0:26,0:26:78.22:0,78,891	0/0:22,0:22:63.15:0,63,697	0/0:20,0:20:57.16:0,57,648	1/1:0,20:20:48.03:439,48,0	1/1:3,16:19:48.02:439,48,0	0/0:32,0:32:90.26:0,90,1029	0/0:30,0:30:81.13:0,81,884	1/1:1,15:16:45.02:412,45,0	1/1:0,16:16:41.97:376,42,0	0/0:15,0:14:36.10:0,36,407	1/1:0,12:12:30.01:274,30,0	0/0:19,0:19:54.16:0,54,623	0/0:33,0:35:95.95:0,96,1067	1/1:0,22:22:51.03:467,51,0	1/1:0,26:26:77.99:698,78,0	1/1:2,21:23:56.98:513,57,0	1/1:1,4:5:9:82,9,0
chr10	5995669	.	CTCTCAT	C	329.42	PASS	AB=1.000;AC=20;AF=0.385;AN=52;BaseQRankSum=4.472;DP=325;FS=4.986;HRun=0;HaplotypeScore=131.4375;InbreedingCoeff=-0.0037;MQ=28.55;MQ0=36;MQRankSum=-1.091;QD=1.83;ReadPosRankSum=0.552;VQSLOD=2.2378;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:20,0:17:75.03:98,0,75	1/1:4,0:3:5.03:45,5,0	./.	./.	0/0:11,0:11:0.47:0,0,1	0/0:7,0:7:0:0,0,1	0/0:12,5:15:0.47:0,0,1	0/0:16,0:14:26.95:0,27,385	1/1:13,0:13:1.31:20,1,0	0/1:10,0:9:83.55:95,0,84	0/0:9,0:8:0.47:0,0,1	0/1:18,0:17:20.11:20,0,53	0/1:11,0:10:5.78:6,0,98	0/1:14,0:12:11.72:23,0,12	1/1:12,0:7:2.55:23,3,0	1/1:8,0:6:2.81:24,3,0	0/1:18,0:11:28.07:28,0,133	0/1:9,0:7:31.82:32,0,115	0/1:5,0:5:16.92:17,0,28	0/0:12,0:11:3.78:0,4,15	1/1:11,0:8:3.10:24,3,0	0/0:14,0:13:0.47:0,0,1	0/0:14,0:12:9.03:0,9,133	0/1:13,0:11:0.18:0,0,0	0/0:16,0:15:0:0,0,1	0/0:12,0:11:28.34:0,28,270	0/1:14,0:14:2.14:2,0,68	0/0:8,0:6:6.70:0,7,20
chr10	5995673	.	CATACAT	C	1119.05	PASS	AB=0.963;AC=28;AF=0.519;AN=54;BaseQRankSum=5.106;DP=314;FS=24.882;HRun=0;HaplotypeScore=122.2453;InbreedingCoeff=0.2412;MQ=28.85;MQ0=30;MQRankSum=-0.621;QD=6.05;ReadPosRankSum=1.791;VQSLOD=0.8642;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:18,0:16:38.86:39,0,200	1/1:4,0:3:6.02:86,6,0	./.	0/0:8,0:1:3.01:0,3,33	0/0:7,4:11:0.47:0,0,1	0/0:7,0:7:0:0,0,1	0/0:17,0:15:0.47:0,0,1	0/0:18,0:16:6.27:0,6,367	1/1:13,0:13:1.76:49,2,0	1/1:10,0:9:17.72:238,18,0	0/0:8,1:8:0.47:0,0,1	1/1:14,2:16:9.10:120,9,0	1/1:8,1:9:13.15:111,13,0	1/1:7,5:10:5.61:80,6,0	1/1:11,0:7:2.30:40,2,0	1/1:8,0:6:2.82:49,3,0	0/1:14,1:9:17.95:154,0,18	1/1:9,0:7:17.94:184,18,0	0/1:6,0:5:25.80:49,0,26	0/0:10,1:11:3.88:0,4,19	1/1:7,1:7:3.90:13,4,0	0/0:13,1:13:0.47:0,0,1	0/1:14,0:13:0.32:0,0,33	0/1:7,0:6:0.18:0,0,0	0/0:16,0:15:0:0,0,1	0/0:12,0:11:16.93:0,17,245	0/1:14,0:14:16.53:28,0,17	1/1:7,0:7:4.72:17,5,0
chr10	5995677	.	CAT	C	871.94	PASS	AB=0.850;AC=34;AF=0.630;AN=54;BaseQRankSum=1.835;DP=319;FS=27.547;HRun=0;HaplotypeScore=114.9949;InbreedingCoeff=0.3211;MQ=29.36;MQ0=31;MQRankSum=-0.846;QD=3.63;ReadPosRankSum=-0.310;VQSLOD=0.6721;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:20,1:17:33.25:134,0,33	1/1:2,2:3:6.01:59,6,0	./.	0/0:11,0:1:2.74:0,3,12	0/1:8,2:10:0:0,0,0	0/1:3,2:5:0.01:0,0,0	0/0:15,2:15:0:0,0,1	0/0:17,0:16:20.70:0,21,197	1/1:9,4:13:2.60:28,3,0	1/1:1,8:8:17.74:168,18,0	0/0:6,3:8:0:0,0,0	1/1:14,1:15:11.50:79,12,0	1/1:8,1:8:11.84:81,12,0	1/1:10,1:9:5.55:31,6,0	1/1:7,4:7:2.80:30,3,0	1/1:6,2:6:3:29,3,0	1/1:13,1:7:11.87:86,12,0	1/1:8,0:6:14.87:110,15,0	1/1:5,1:5:11.93:95,12,0	1/1:9,4:13:2.48:17,2,0	1/1:8,1:7:5.63:36,6,0	0/1:15,4:18:0.01:0,0,0	0/1:14,2:15:12.03:12,0,13	0/1:7,1:7:0.18:1,0,0	0/1:9,7:15:0.01:0,0,0	0/0:12,0:11:1.96:0,2,99	0/1:15,0:15:3.61:4,0,32	0/0:7,0:7:1.06:0,1,4
chr10	5995682	.	ACACACACACACACACACACACACG	A	2097.88	PASS	AB=0.924;AC=15;AF=0.288;AN=52;BaseQRankSum=2.934;DP=327;FS=0.000;HRun=0;HaplotypeScore=162.4831;InbreedingCoeff=0.3495;MQ=29.64;MQ0=29;MQRankSum=1.033;QD=23.05;ReadPosRankSum=2.913;VQSLOD=2.2265;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:16:29.58:0,30,2266	0/0:4,0:3:6.02:0,6,187	./.	0/0:13,0:1:3.01:0,3,121	0/0:12,0:12:0.89:0,1,2	0/0:5,0:5:4.37:0,4,23	0/0:15,0:14:1.41:0,1,3	0/1:12,5:16:42.09:164,0,42	1/1:13,0:13:0.24:94,0,0	0/0:8,0:8:17.14:0,17,391	0/0:10,0:9:0.89:0,1,2	0/0:14,0:14:4.37:0,4,48	0/0:8,0:7:9.03:0,9,234	0/0:13,0:11:2.07:0,2,137	1/1:11,0:7:1.62:90,2,0	1/1:8,0:6:2.32:97,2,0	0/0:14,0:9:15.02:0,15,389	0/0:12,0:11:6.02:0,6,246	0/1:5,0:4:63.51:80,0,64	0/0:13,0:13:3.48:0,3,68	0/0:11,0:9:6.91:0,7,288	0/0:20,0:19:1.41:0,1,4	./.	0/1:8,0:7:0.04:0,0,0	0/0:16,0:15:1.41:0,1,4	1/1:7,3:9:9:402,9,0	1/1:6,10:16:13.35:926,13,0	1/1:0,3:3:6.02:381,6,0
chr10	5995688	.	ACACACACACACACACACG	A	1675.66	PASS	AB=1.000;AC=20;AF=0.385;AN=52;BaseQRankSum=3.961;DP=307;FS=0.000;HRun=0;HaplotypeScore=142.0679;InbreedingCoeff=0.2870;MQ=30.18;MQ0=23;MQRankSum=-0.224;QD=14.08;ReadPosRankSum=2.994;VQSLOD=2.4697;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:17:28.86:0,29,1630	0/0:3,0:3:8.96:0,9,110	./.	0/0:14,0:1:3.01:0,3,80	0/0:11,0:11:0.89:0,1,2	0/0:4,2:5:2.30:0,2,5	0/0:9,2:11:1.41:0,1,2	0/1:15,0:14:4.18:78,0,4	1/1:10,2:12:0.75:127,1,0	0/1:8,0:8:8.84:9,0,67	0/0:11,0:11:0.89:0,1,2	1/1:12,0:12:1.85:8,2,0	0/0:9,0:8:8.98:0,9,99	0/1:13,0:11:17.87:18,0,33	1/1:7,4:7:1.88:131,2,0	1/1:5,2:6:2.45:132,2,0	0/1:13,0:9:22.32:22,0,132	0/0:8,0:8:5.99:0,6,123	1/1:2,1:2:3.01:135,3,0	0/0:12,3:15:0.47:0,0,1	0/0:12,0:11:12.93:0,13,339	0/0:15,4:18:1.41:0,1,3	./.	0/0:7,0:6:0.27:0,0,1	0/0:8,7:15:1.41:0,1,3	1/1:6,0:6:8.95:270,9,0	1/1:16,0:16:14.52:631,15,0	1/1:3,0:3:6.02:253,6,0
chr10	5995690	.	ACACACACACACACACG	A	1700.06	PASS	AB=1.000;AC=26;AF=0.500;AN=52;BaseQRankSum=4.019;DP=301;FS=0.000;HRun=0;HaplotypeScore=138.8036;InbreedingCoeff=0.3028;MQ=30.90;MQ0=21;MQRankSum=-1.095;QD=12.41;ReadPosRankSum=2.952;VQSLOD=2.2656;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:16:32.34:0,32,1450	0/0:3,0:3:5.10:0,5,48	./.	0/0:14,0:1:3.01:0,3,58	0/0:11,0:11:0.47:0,0,2	1/1:6,0:5:1.66:15,2,0	0/0:11,0:11:4.39:0,4,23	1/1:13,0:12:14.88:110,15,0	1/1:11,0:11:1.58:121,2,0	1/1:7,0:7:0.93:45,1,0	0/0:11,0:11:0.47:0,0,1	1/1:12,0:12:2:26,2,0	0/1:11,0:10:6.20:6,0,40	0/1:12,0:11:31.82:34,0,32	1/1:10,0:7:2.30:125,2,0	1/1:7,0:6:2.65:125,3,0	0/1:12,0:9:42.59:43,0,79	0/0:9,0:9:2.37:0,2,80	1/1:4,0:3:6.02:162,6,0	0/0:11,4:15:0.46:0,0,1	0/0:13,0:12:15.92:0,16,285	0/0:12,6:17:1.41:0,1,3	./.	0/1:7,0:6:0.26:0,0,0	0/0:14,0:14:1.41:0,1,3	1/1:6,0:6:8.95:242,9,0	1/1:16,0:16:14.57:561,15,0	1/1:3,0:3:6.02:225,6,0
chr10	5995698	.	ACACACACG	A	2242.33	PASS	AB=0.952;AC=38;AF=0.704;AN=54;BaseQRankSum=0.456;DP=302;FS=0.000;HRun=0;HaplotypeScore=118.3181;InbreedingCoeff=0.2210;MQ=31.67;MQ0=21;MQRankSum=-1.416;QD=10.48;ReadPosRankSum=-2.158;VQSLOD=2.1620;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:18:7.02:0,7,555	1/1:2,1:3:8.98:164,9,0	1/1:18,0:2:5.96:46,6,0	0/1:19,0:4:22.72:62,0,23	0/0:10,2:12:0.47:0,0,1	1/1:8,0:7:2.28:17,2,0	1/1:16,0:16:17.02:141,17,0	1/1:8,0:7:17.81:127,18,0	1/1:10,0:10:2.35:65,2,0	1/1:5,4:9:20.93:383,21,0	0/0:9,3:12:0.47:0,0,1	1/1:8,1:9:2.79:63,3,0	1/1:8,1:8:13.12:123,13,0	1/1:10,1:10:8.23:92,8,0	1/1:9,0:8:2.64:65,3,0	1/1:7,0:6:2.85:66,3,0	0/1:9,1:9:4.28:164,0,4	0/1:7,0:7:6.79:61,0,7	1/1:5,0:4:8.98:115,9,0	0/0:13,0:13:0.46:0,0,1	0/1:12,1:12:3.35:55,0,3	0/0:17,0:16:0.47:0,0,1	./.	0/1:6,1:6:0.14:0,0,0	0/1:18,0:18:0:0,0,1	1/1:4,0:4:11.92:151,12,0	1/1:11,0:11:15.05:282,15,0	1/1:3,0:3:6.02:113,6,0
chr10	5995700	.	ACACACG	A	2102.70	PASS	AB=0.909;AC=42;AF=0.778;AN=54;BaseQRankSum=-0.607;DP=300;FS=2.626;HRun=0;HaplotypeScore=113.0523;InbreedingCoeff=0.3566;MQ=31.75;MQ0=20;MQRankSum=-1.988;QD=9.35;ReadPosRankSum=-2.831;VQSLOD=1.5178;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:19:3.61:0,4,341	1/1:2,1:3:8.98:131,9,0	1/1:18,0:2:5.96:46,6,0	0/1:20,0:4:1.30:62,0,1	0/0:11,1:12:0.47:0,0,1	1/1:7,0:6:2.77:18,3,0	1/1:18,0:18:20.45:161,20,0	1/1:8,0:7:17.81:127,18,0	1/1:9,0:9:2.66:51,3,0	1/1:8,0:8:20.96:335,21,0	0/0:12,0:12:0.47:0,0,1	1/1:9,0:9:2.95:55,3,0	1/1:8,1:8:12.76:115,13,0	1/1:11,0:10:8.56:72,9,0	1/1:8,0:7:2.25:51,2,0	1/1:6,0:6:3.01:52,3,0	1/1:9,1:9:16.43:171,16,0	1/1:1,6:7:6.02:88,6,0	1/1:6,0:5:11.97:124,12,0	0/1:12,0:12:0.01:0,0,0	1/1:11,2:12:16.09:117,16,0	0/0:17,0:16:0:0,0,1	./.	0/1:3,4:6:0:0,0,0	0/1:17,0:17:0:0,0,0	1/1:4,0:4:11.92:123,12,0	1/1:11,0:11:15.05:213,15,0	1/1:3,0:3:6.02:85,6,0
chr10	5997195	.	CT	C	7032.31	PASS	AB=0.938;AC=28;AF=0.500;AN=56;BaseQRankSum=-18.305;DP=686;FS=5.681;HRun=10;HaplotypeScore=110.2946;InbreedingCoeff=0.8667;MQ=72.90;MQ0=0;MQRankSum=-0.601;QD=17.15;ReadPosRankSum=0.630;VQSLOD=4.5879;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,19:23:47.97:417,48,0	1/1:3,7:10:20.99:182,21,0	0/0:14,0:14:25.52:0,26,243	0/0:10,0:10:12.73:0,13,149	1/1:5,43:48:99:1041,120,0	0/0:25,0:25:63.30:0,63,398	0/0:19,0:19:43.17:0,43,279	0/1:39,1:40:5.11:5,0,401	0/0:15,0:15:38.50:0,38,254	1/1:3,30:34:86.93:751,87,0	1/1:4,17:21:14.79:358,15,0	1/1:0,24:24:68.99:599,69,0	1/1:1,23:24:65.99:573,66,0	1/1:0,22:22:59.99:521,60,0	0/0:19,0:19:44.36:0,44,286	0/0:22,1:23:26.07:0,26,295	1/1:2,18:20:47.97:417,48,0	1/1:4,25:29:62.97:547,63,0	0/0:13,0:13:22.62:0,23,150	0/0:44,0:44:99:0,115,757	1/1:4,15:19:35.92:312,36,0	0/0:21,0:21:53.29:0,53,350	1/1:3,40:43:99:911,105,0	1/1:1,16:17:41.99:365,42,0	0/0:23,0:23:67.92:0,68,430	0/1:32,4:36:34:34,0,373	0/0:28,0:28:80.10:0,80,545	0/0:22,0:22:41.40:0,41,292
chr10	5998205	.	ATTG	A	26428.16	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=4.190;DP=614;FS=9.161;HRun=0;HaplotypeScore=145.1725;InbreedingCoeff=0.9758;MQ=85.65;MQ0=0;MQRankSum=-11.683;QD=47.11;ReadPosRankSum=6.627;VQSLOD=6.5696;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,33:33:85.09:1416,85,0	1/1:0,17:17:42.14:740,42,0	0/0:26,0:26:69.23:0,69,1445	0/0:27,0:27:81.04:0,81,1665	1/1:0,11:12:30.06:465,30,0	1/1:0,15:15:42.10:707,42,0	1/1:0,15:15:45.07:727,45,0	1/1:1,23:24:66.21:1112,66,0	1/1:0,21:21:60.21:1056,60,0	1/1:2,22:24:63.19:1081,63,0	1/1:0,6:6:12:179,12,0	1/1:0,26:26:72.20:1221,72,0	1/1:0,32:32:90.31:1586,90,0	1/1:0,24:24:72.25:1268,72,0	1/1:1,29:30:78.27:1374,78,0	1/1:1,30:31:93.31:1614,93,0	1/1:0,33:33:84.29:1482,84,0	1/1:0,25:25:72.25:1269,72,0	1/1:0,16:16:48.13:782,48,0	1/1:0,16:16:42.10:707,42,0	1/1:0,27:27:75.21:1272,75,0	1/1:0,16:16:45.07:711,45,0	1/1:0,11:11:33.07:548,33,0	1/1:0,29:29:81.25:1428,81,0	1/1:0,21:21:51.13:866,51,0	1/1:1,24:25:72.23:1231,72,0	1/1:0,25:25:75.26:1322,75,0	1/1:0,7:7:14.98:264,15,0
chr10	5998333	.	TACACACACAC	T	4733.83	PASS	AB=0.707;AC=29;AF=0.558;AN=52;BaseQRankSum=1.149;DP=735;FS=4.222;HRun=0;HaplotypeScore=218.9456;InbreedingCoeff=-0.0179;MQ=49.22;MQ0=18;MQRankSum=-5.740;QD=7.79;ReadPosRankSum=2.029;VQSLOD=3.5619;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:32,0:44:6.81:7,0,169	0/0:2,0:11:19.39:0,19,168	./.	./.	0/1:12,2:21:1.47:110,0,1	1/1:7,13:21:12.28:622,12,0	1/1:22,0:22:17.52:164,18,0	0/0:18,0:16:14.29:0,14,131	1/1:8,17:28:36.09:876,36,0	0/1:19,1:33:99:236,0,171	0/1:11,0:20:27.88:28,0,41	0/1:14,1:26:40.71:117,0,41	0/1:26,0:45:99:148,0,139	0/1:12,2:29:14.06:274,0,14	1/1:9,21:30:17.79:656,18,0	0/1:14,20:35:17.52:620,0,18	0/0:14,0:13:18.45:0,18,195	0/0:11,0:23:18.59:0,19,94	1/1:19,3:18:8.34:119,8,0	1/1:9,10:18:2.73:89,3,0	0/1:67,0:66:31.62:32,0,130	0/1:7,23:30:10.39:107,0,10	0/1:13,1:27:5.40:133,0,5	1/1:16,0:23:3.01:68,3,0	1/1:7,18:25:12.04:211,12,0	0/0:12,0:19:20.65:0,21,252	0/1:14,0:27:36.31:36,0,54	0/1:7,1:8:57.35:81,0,57
chr10	5999637	.	A	ACATCC	20683.07	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=13.599;DP=663;FS=6.321;HRun=0;HaplotypeScore=140.2319;InbreedingCoeff=0.9987;MQ=78.66;MQ0=0;MQRankSum=-19.151;QD=67.15;ReadPosRankSum=0.497;VQSLOD=5.8217;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,26:33:78.22:2338,78,0	1/1:4,6:12:27.05:715,27,0	0/0:23,0:23:69.22:0,69,1331	0/0:17,0:17:45.11:0,45,880	1/1:6,16:27:51.05:1365,51,0	0/0:19,0:19:57.18:0,57,1175	0/0:29,0:29:87.22:0,87,1646	0/0:33,0:33:90.29:0,90,1844	0/0:20,0:20:57.18:0,57,1172	1/1:6,27:34:93.29:2742,93,0	1/1:1,9:10:24.08:748,24,0	1/1:9,20:32:75.21:2146,75,0	1/1:9,24:35:87.25:2535,87,0	1/1:7,26:36:90.26:2615,90,0	0/0:20,0:20:54.19:0,54,1149	0/0:21,0:21:60.19:0,60,1240	1/1:3,11:14:24.08:749,24,0	1/1:2,15:18:51.18:1594,51,0	0/0:27,0:27:72.25:0,72,1534	0/0:32,0:32:90.31:0,90,1918	1/1:4,8:12:21.07:655,21,0	0/0:29,0:29:87.28:0,87,1814	1/1:2,20:24:48.11:1497,48,0	1/1:10,9:21:36.56:984,37,0	0/0:15,0:15:39.13:0,39,818	0/0:38,0:38:99:0,111,2267	0/0:15,0:15:45.15:0,45,956	0/0:17,0:17:45.15:0,45,957
chr10	6000390	.	GAGGAAGGA	G	443	PASS	AB=0.714;AC=3;AF=0.056;AN=54;BaseQRankSum=1.828;DP=728;FS=3.045;HRun=0;HaplotypeScore=237.6384;InbreedingCoeff=0.2993;MQ=57.72;MQ0=10;MQRankSum=-5.701;QD=7.77;ReadPosRankSum=1.372;VQSLOD=2.3851;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:10,22:32:0.01:470,0,0	0/0:14,0:14:27.08:0,27,781	./.	0/0:15,0:10:3:0,3,26	0/0:45,0:45:96.14:0,96,2873	0/0:40,0:40:56.62:0,57,1281	0/0:33,0:31:19.67:0,20,162	0/1:15,0:22:61.26:61,0,71	0/0:24,0:24:57.17:0,57,1249	0/0:26,0:25:57.06:0,57,1727	0/0:14,0:14:26.99:0,27,579	0/0:35,0:35:78.23:0,78,2530	0/0:25,0:25:51.15:0,51,1712	0/0:27,0:27:63.15:0,63,1893	0/0:23,0:23:39.16:0,39,779	0/0:34,0:34:47.36:0,47,1279	0/0:26,0:26:16.62:0,17,2195	0/0:29,0:29:61.82:0,62,1485	0/0:18,0:16:9.92:0,10,180	0/0:20,0:20:34.99:0,35,484	0/0:27,0:25:54.07:0,54,1403	0/0:28,0:28:46.64:0,47,946	0/0:32,0:32:78.21:0,78,2362	0/0:18,0:17:35.97:0,36,1073	0/0:22,0:22:24.91:0,25,599	0/0:33,0:33:82.60:0,83,1561	0/0:33,0:33:54.49:0,54,1261	0/0:13,0:13:24.08:0,24,560
chr10	6000409	.	G	GAAAA	17117.96	PASS	AB=0.522;AC=25;AF=0.446;AN=56;BaseQRankSum=15.155;DP=752;FS=1.734;HRun=2;HaplotypeScore=128.6680;InbreedingCoeff=0.9151;MQ=55.56;MQ0=11;MQRankSum=-2.729;QD=46.77;ReadPosRankSum=4.189;VQSLOD=3.6500;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:39.07:0,39,459	0/0:12,0:12:36.09:0,36,602	0/0:10,0:5:9:0,9,106	0/0:10,0:7:12.04:0,12,183	0/0:42,0:42:99:0,123,2150	1/1:3,31:36:63.22:1656,63,0	1/1:8,20:28:36.12:876,36,0	1/1:27,0:24:56.51:756,57,0	1/1:3,27:32:66.23:1683,66,0	0/0:29,0:28:87.29:0,87,1533	0/0:16,0:16:42.14:0,42,731	0/0:29,0:29:87.30:0,87,1589	0/0:30,0:30:87.27:0,87,1484	0/0:31,0:31:87.26:0,87,1506	1/1:0,28:28:48.16:1313,48,0	1/1:2,28:32:66.23:1808,66,0	0/0:33,0:32:52.14:0,52,1453	0/0:30,0:30:53.46:0,53,1238	1/1:1,11:13:36.12:744,36,0	1/1:2,16:19:51.13:1052,51,0	0/0:30,0:28:81.28:0,81,1413	1/1:2,28:33:66.14:1493,66,0	0/0:33,0:33:99:0,99,1715	0/0:19,0:18:51.17:0,51,894	1/1:4,17:24:35.64:979,36,0	0/1:3,32:36:56.51:2143,0,57	1/1:2,35:38:75.26:1959,75,0	1/1:2,15:17:24.08:657,24,0
chr10	6002227	.	GT	G	5972.52	PASS	AB=0.677;AC=46;AF=0.821;AN=56;BaseQRankSum=2.064;DP=710;FS=0.000;HRun=13;HaplotypeScore=98.6282;InbreedingCoeff=0.0193;MQ=76.39;MQ0=0;MQRankSum=-0.816;QD=8.69;ReadPosRankSum=4.398;VQSLOD=4.1612;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:23:28.94:0,29,356	0/1:5,7:12:22.19:142,0,22	0/1:31,2:25:24.96:25,0,105	0/1:14,1:14:17.79:18,0,78	0/1:12,21:33:8.78:392,0,9	1/1:3,1:34:57.95:181,58,0	1/1:0,0:13:24.44:71,24,0	1/1:16,30:46:41.94:604,42,0	1/1:8,0:28:38.46:111,38,0	1/1:12,23:35:65.81:472,66,0	0/1:9,15:24:15.87:254,0,16	1/1:4,12:16:3.60:190,4,0	1/1:1,24:25:38.47:414,38,0	1/1:10,21:31:44.55:328,45,0	1/1:3,3:27:47.21:176,47,0	1/1:7,3:36:51.68:189,52,0	1/1:3,10:15:25.24:182,25,0	1/1:5,13:19:33.09:228,33,0	1/1:6,1:23:33.76:113,34,0	1/1:6,0:30:46.59:135,47,0	0/1:6,14:20:10.70:253,0,11	1/1:4,2:29:46.21:160,46,0	0/1:5,20:26:34.17:332,0,34	0/1:9,17:27:5.63:281,0,6	1/1:2,0:20:30.55:88,31,0	1/1:8,11:20:2.58:174,3,0	1/1:12,17:29:38.65:284,39,0	1/1:4,11:16:26.68:176,27,0
chr10	6002239	.	TTC	T	512.66	PASS	AB=0.988;AC=11;AF=0.196;AN=56;BaseQRankSum=11.199;DP=697;FS=8.301;HRun=0;HaplotypeScore=126.6613;InbreedingCoeff=0.0007;MQ=76.50;MQ0=0;MQRankSum=-0.940;QD=2.07;ReadPosRankSum=6.654;VQSLOD=0.9348;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:45.89:0,46,698	0/0:10,0:10:29.11:0,29,221	0/0:32,0:23:27.08:0,27,321	0/0:20,0:17:18.55:0,19,274	0/0:35,0:34:64.95:0,65,571	0/1:34,0:34:28.55:95,0,29	0/1:16,0:16:27.70:28,0,47	0/0:42,0:42:92.59:0,93,665	1/1:22,2:24:21.40:190,21,0	0/0:30,0:30:44.08:0,44,438	0/0:23,0:23:58.07:0,58,411	0/0:21,0:21:47.18:0,47,319	0/0:26,0:26:62.88:0,63,361	0/0:30,0:30:57.95:0,58,374	0/1:28,2:30:91.02:92,0,91	0/1:32,0:32:46.83:48,0,47	0/0:19,0:19:36.57:0,37,257	0/0:16,0:16:24.21:0,24,169	0/1:19,0:19:16.68:17,0,57	0/1:27,0:27:20.08:54,0,20	0/0:20,0:20:36.13:0,36,391	0/1:30,0:30:77.81:78,0,114	0/0:31,0:30:74.38:0,74,582	0/0:21,0:21:49.23:0,49,352	0/1:21,1:22:39.96:59,0,40	0/0:21,0:21:52.18:0,52,391	0/0:28,0:28:63.91:0,64,403	0/1:14,0:14:1.53:2,0,74
chr10	6005262	.	G	GCC	2650.45	PASS	AB=0.553;AC=25;AF=0.446;AN=56;BaseQRankSum=1.095;DP=559;FS=9.428;HRun=9;HaplotypeScore=82.0043;InbreedingCoeff=0.8466;MQ=84.07;MQ0=1;MQRankSum=-1.695;QD=11.33;ReadPosRankSum=-3.436;VQSLOD=0.0517;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:25:68.89:0,69,714	0/0:13,0:13:33:0,33,338	0/0:25,0:23:33.16:0,33,411	0/0:25,0:23:36.98:0,37,304	0/0:23,0:23:53.96:0,54,546	1/1:2,12:16:17.03:202,17,0	1/1:6,20:28:44.07:617,44,0	1/1:12,0:26:13.07:151,13,0	1/1:5,16:22:29.51:372,30,0	0/0:14,0:14:39.09:0,39,408	0/0:18,0:18:41.91:0,42,428	0/0:23,0:24:59.84:0,60,618	0/0:23,0:25:38.92:0,39,525	0/0:28,0:28:63:0,63,637	1/1:2,19:21:23.52:305,24,0	1/1:4,3:19:17.84:190,18,0	0/0:25,0:25:72.16:0,72,766	0/0:19,0:20:45.04:0,45,525	1/1:8,2:14:16.78:118,17,0	1/1:2,11:14:26.40:265,26,0	0/0:21,0:22:56.84:0,57,570	1/1:3,14:17:6.23:302,6,0	0/0:12,0:12:33.04:0,33,335	0/0:25,0:25:60.14:0,60,638	1/1:7,9:16:9.03:138,9,0	0/1:4,0:21:19.07:124,0,19	1/1:4,0:13:0.39:46,0,0	1/1:1,0:5:5.49:33,5,0
chr10	6005865	.	T	TC	7816.63	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-13.159;DP=613;FS=1.031;HRun=8;HaplotypeScore=57.5630;InbreedingCoeff=0.9842;MQ=77.59;MQ0=0;MQRankSum=-2.501;QD=26.06;ReadPosRankSum=2.893;VQSLOD=5.6152;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,30:33:79.12:902,79,0	1/1:4,11:15:5.65:371,6,0	0/0:26,0:25:54.02:0,54,493	0/0:13,0:13:35.86:0,36,303	1/1:6,21:28:57:636,57,0	0/0:21,0:21:57.01:0,57,516	0/0:17,0:17:48.02:0,48,439	0/0:32,1:33:50.90:0,51,700	0/0:21,0:21:60.02:0,60,546	1/1:4,14:18:41.94:455,42,0	1/1:6,21:28:60.18:689,60,0	1/1:3,16:19:42.12:485,42,0	1/1:2,22:24:54.16:623,54,0	1/1:1,13:14:30.09:346,30,0	0/0:29,0:30:78:0,78,705	0/0:20,0:20:60.03:0,60,549	1/1:4,33:37:87.26:1004,87,0	1/1:2,13:15:36.11:415,36,0	0/0:16,0:16:45.02:0,45,412	0/0:15,0:15:38.99:0,39,348	1/1:3,21:24:57.17:658,57,0	0/0:24,0:24:60.02:0,60,543	1/1:5,21:26:54.16:623,54,0	1/1:2,17:19:54.13:610,54,0	0/0:12,0:12:23.99:0,24,215	0/0:17,0:17:42.01:0,42,381	0/0:23,0:22:57:0,57,516	0/0:25,0:25:50.15:0,50,585
chr10	6007949	.	G	GT	14983.03	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-3.212;DP=732;FS=1.883;HRun=0;HaplotypeScore=76.6456;InbreedingCoeff=0.9958;MQ=88.71;MQ0=0;MQRankSum=-2.531;QD=44.59;ReadPosRankSum=4.073;VQSLOD=5.1286;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,135,1849	1/1:0,11:11:33.11:527,33,0	0/0:31,0:31:75.24:0,75,1007	0/0:21,0:21:60.18:0,60,805	1/1:0,23:23:63.21:1007,63,0	0/0:24,0:24:72.24:0,72,1005	0/0:28,0:28:84.28:0,84,1168	0/0:31,0:31:90.30:0,90,1258	0/0:28,0:28:84.28:0,84,1171	1/1:0,26:26:78.25:1223,78,0	1/1:0,18:18:51.17:815,51,0	1/1:2,42:44:99:2000,126,0	1/1:1,29:30:87.30:1381,87,0	1/1:1,27:28:72.20:1123,72,0	0/0:27,0:27:81.27:0,81,1132	0/0:21,0:21:63.20:0,63,863	1/1:0,20:20:57.19:911,57,0	1/1:0,28:28:81.28:1295,81,0	0/0:23,0:23:69.23:0,69,964	0/0:19,0:19:57.19:0,57,794	1/1:2,57:60:99:2590,163,0	0/0:28,0:28:84.27:0,84,1157	1/1:0,22:22:63.21:1007,63,0	1/1:1,25:26:69.24:1103,69,0	0/0:25,0:25:72.24:0,72,1007	0/0:19,1:20:12.22:0,12,749	0/0:13,0:13:39.13:0,39,544	0/0:12,0:12:36.12:0,36,502
chr10	6008431	.	C	CT	18296.54	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-7.737;DP=534;FS=8.191;HRun=3;HaplotypeScore=46.9014;InbreedingCoeff=0.9585;MQ=84.83;MQ0=0;MQRankSum=-8.118;QD=36.59;ReadPosRankSum=4.454;VQSLOD=4.8641;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,17:18:48.16:672,48,0	1/1:1,7:8:15.05:210,15,0	0/0:18,0:18:32.35:0,32,456	0/0:16,0:16:19.34:0,19,368	1/1:1,24:25:69.19:944,69,0	1/1:3,17:20:48.16:672,48,0	1/1:0,16:16:39.13:546,39,0	1/1:4,30:34:90.28:1240,90,0	1/1:1,20:21:54.18:756,54,0	1/1:0,20:20:60.20:840,60,0	1/1:1,17:18:48.16:672,48,0	1/1:0,18:18:45.15:630,45,0	1/1:0,13:13:33.11:462,33,0	1/1:1,13:14:33.11:462,33,0	1/1:0,21:21:57.19:798,57,0	1/1:0,24:24:66.22:925,66,0	1/1:2,20:22:60.20:840,60,0	1/1:0,10:10:30.10:420,30,0	1/1:1,21:22:63.21:882,63,0	1/1:2,21:22:30.17:824,30,0	1/1:0,9:9:27.09:378,27,0	1/1:1,19:20:51.17:714,51,0	1/1:2,28:30:78.26:1092,78,0	1/1:0,13:13:36.12:504,36,0	1/1:0,22:22:57.19:798,57,0	1/1:2,22:24:66.22:921,66,0	1/1:3,29:32:69.23:965,69,0	1/1:0,3:3:9.03:126,9,0
chr10	6008865	.	CGCTGGAGAGGTGGCTCAGTGGTTAAGAGCACAGACTGGG	C	4942.01	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-10.445;DP=584;FS=33.418;HRun=0;HaplotypeScore=558.7131;InbreedingCoeff=0.9587;MQ=79.90;MQ0=1;MQRankSum=-7.424;QD=31.48;ReadPosRankSum=3.698;VQSLOD=0.6524;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,135,11327	1/1:4,0:4:9.02:140,9,0	0/0:34,0:31:58.01:0,58,949	0/0:17,0:15:29.79:0,30,487	1/1:14,0:13:29.68:454,30,0	0/0:36,0:36:99:0,102,8733	0/0:24,0:24:66.05:0,66,4105	0/0:28,0:28:66.10:0,66,1967	0/0:21,0:21:60.17:0,60,6386	1/1:8,8:16:36.06:566,36,0	1/1:12,0:12:35.54:300,36,0	1/1:10,0:10:24.01:289,24,0	1/1:16,0:16:43.81:538,44,0	1/1:17,0:17:41.81:554,42,0	0/0:20,0:20:53.99:0,54,4316	0/0:22,0:22:57.16:0,57,6182	1/1:12,0:12:29.89:423,30,0	1/1:11,0:11:25.15:299,25,0	0/0:23,0:23:63.08:0,63,2844	0/0:28,0:28:72.13:0,72,4925	1/1:15,0:15:31.82:380,32,0	0/0:17,0:17:41.49:0,41,3722	1/1:18,0:18:47.38:649,47,0	1/1:12,0:12:23.63:349,24,0	0/0:26,0:26:72.13:0,72,6210	0/0:38,0:38:1.06:0,1,6750	0/0:34,0:34:83.93:0,84,9482	0/0:13,0:13:30.08:0,30,4192
chr10	6009609	.	CA	C	9758.56	PASS	AB=0.931;AC=25;AF=0.446;AN=56;BaseQRankSum=18.649;DP=678;FS=0.000;HRun=1;HaplotypeScore=83.2464;InbreedingCoeff=0.9581;MQ=84.04;MQ0=0;MQRankSum=-2.728;QD=32.00;ReadPosRankSum=2.738;VQSLOD=4.5565;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:75.24:0,75,1171	1/1:0,11:11:27.09:376,27,0	0/0:22,0:22:59.36:0,59,940	0/0:18,0:18:49.69:0,50,722	1/1:0,21:21:59.99:786,60,0	0/0:25,0:25:75.24:0,75,1174	0/0:30,0:30:90.26:0,90,1363	0/0:40,0:40:99:0,117,1778	0/0:25,0:25:75.24:0,75,1170	1/1:0,32:32:90.11:1187,90,0	1/1:0,29:29:72.24:999,72,0	1/1:0,17:17:45.15:627,45,0	1/1:0,29:29:62.99:855,63,0	1/1:0,18:18:45.15:627,45,0	0/0:25,0:25:75.26:0,75,1198	0/0:31,0:31:93.32:0,93,1483	1/1:0,30:30:72.24:1003,72,0	1/1:0,13:13:30.10:418,30,0	0/0:17,0:17:51.12:0,51,763	0/0:26,0:26:78.27:0,78,1242	1/1:0,24:24:69.23:960,69,0	0/0:15,0:15:45.15:0,45,718	1/1:0,30:30:80.93:1125,81,0	1/1:0,24:24:57.19:793,57,0	0/0:36,0:36:99:0,108,1603	0/1:25,2:27:1.24:1,0,1056	0/0:30,0:30:90.29:0,90,1411	0/0:8,0:8:24.08:0,24,383
chr10	6015261	.	GGTATATATATATATATAT	G	3412.07	PASS	AB=1.000;AC=19;AF=0.452;AN=42;BaseQRankSum=-2.440;DP=300;FS=24.591;HRun=0;HaplotypeScore=165.2164;InbreedingCoeff=0.5004;MQ=70.26;MQ0=0;MQRankSum=-2.782;QD=21.60;ReadPosRankSum=4.142;VQSLOD=0.9000;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:11.98:0,12,120	./.	0/0:8,0:7:3:0,3,27	0/0:10,0:8:8.68:0,9,91	1/1:7,15:22:5.39:91,5,0	./.	0/0:1,0:1:0.89:0,1,2	0/0:20,0:19:17.10:0,17,130	./.	1/1:19,4:23:57.14:1481,57,0	./.	./.	1/1:15,10:25:21.05:571,21,0	1/1:2,17:19:3.01:49,3,0	0/0:2,0:2:2.99:0,3,24	0/0:8,0:8:3.46:0,3,25	1/1:11,5:16:14.80:501,15,0	1/1:7,1:8:9.03:263,9,0	./.	0/0:3,0:3:3:0,3,25	1/1:9,0:9:2.76:24,3,0	0/0:4,0:4:3:0,3,25	1/1:16,8:24:12.04:241,12,0	0/0:2,10:12:0.47:0,0,1	0/0:4,0:3:3.47:0,3,26	./.	1/1:2,0:2:1.25:3,1,0	0/1:10,0:10:98.81:189,0,99
chr10	6015279	.	T	TACAC	1329.77	PASS	AB=0.934;AC=20;AF=0.500;AN=40;BaseQRankSum=-4.371;DP=213;FS=0.909;HRun=0;HaplotypeScore=133.1950;InbreedingCoeff=0.0555;MQ=48.07;MQ0=2;MQRankSum=1.616;QD=8.31;ReadPosRankSum=0.535;VQSLOD=2.9950;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:4:6.02:0,6,75	./.	1/1:3,0:1:0.47:1,0,0	0/0:7,0:4:5.96:0,6,86	0/1:24,2:26:22.25:37,0,22	./.	1/1:1,0:1:2.99:23,3,0	0/1:9,0:9:8.08:8,0,130	./.	0/1:20,3:23:78.68:633,0,79	./.	0/0:7,1:8:6.88:0,7,45	0/1:20,3:23:55.12:290,0,55	1/1:19,0:19:1.45:33,1,0	./.	1/1:3,0:3:2.99:24,3,0	0/1:12,0:11:56.97:57,0,65	1/1:6,2:8:9.96:176,10,0	./.	0/0:1,0:1:0:0,0,0	./.	./.	0/1:18,2:20:5.98:142,0,6	1/1:12,0:12:0.47:1,0,0	1/1:1,0:0:3:25,3,0	0/0:2,0:2:0.62:0,1,2	0/0:1,0:1:2.90:0,3,16	0/0:8,0:7:17.50:0,17,190
chr10	6015319	.	CAT	C	3773.89	PASS	AB=1.000;AC=39;AF=0.848;AN=46;BaseQRankSum=-4.015;DP=299;FS=10.259;HRun=0;HaplotypeScore=145.8717;InbreedingCoeff=0.1512;MQ=43.85;MQ0=4;MQRankSum=0.952;QD=13.15;ReadPosRankSum=3.964;VQSLOD=3.1608;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,0:1:2.80:13,3,0	1/1:3,0:3:3.01:38,3,0	./.	./.	1/1:4,29:34:33.02:422,33,0	1/1:3,0:3:4.74:16,5,0	./.	0/1:14,0:13:19.27:19,0,35	./.	1/1:6,25:31:78.07:947,78,0	1/1:4,11:15:17.66:231,18,0	1/1:3,18:22:20.63:269,21,0	1/1:4,21:26:32.93:422,33,0	1/1:10,10:20:27.04:302,27,0	./.	0/1:2,0:2:0.04:0,0,0	1/1:3,17:19:27.09:344,27,0	1/1:2,9:11:12.04:152,12,0	1/1:9,0:8:7.30:51,7,0	1/1:4,0:4:9.86:34,10,0	1/1:4,4:8:9.01:100,9,0	1/1:1,0:1:2.50:9,2,0	1/1:6,18:26:14.62:192,15,0	1/1:9,3:13:17.90:186,18,0	0/0:1,0:1:0:0,0,0	0/1:10,0:10:9.12:9,0,93	0/1:8,0:8:2.98:3,0,34	0/1:6,0:6:8.66:12,0,9
chr10	6015343	.	T	TGC	1156.81	PASS	AB=1.000;AC=14;AF=0.280;AN=50;BaseQRankSum=-1.381;DP=414;FS=17.568;HRun=0;HaplotypeScore=152.4399;InbreedingCoeff=0.6632;MQ=46.78;MQ0=13;MQRankSum=-1.932;QD=13.94;ReadPosRankSum=-3.434;VQSLOD=1.9242;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:8:8.57:0,9,63	0/0:5,0:5:8.88:0,9,63	0/0:15,0:3:9.02:0,9,105	0/0:19,0:7:8.35:0,8,79	0/0:38,0:38:39.32:0,39,244	0/1:8,0:8:0.05:0,0,0	1/1:2,0:3:2.99:25,3,0	1/1:18,0:18:36.67:308,37,0	./.	0/0:32,0:32:62.02:0,62,412	0/0:24,0:24:16.49:0,16,150	0/0:23,0:23:29.26:0,29,190	0/0:32,0:32:46.11:0,46,299	0/0:26,0:26:35.16:0,35,221	1/1:6,0:6:3:27,3,0	./.	0/0:21,0:21:2.29:0,2,94	0/0:15,0:15:17.59:0,18,117	0/1:15,0:12:27:37,0,27	0/0:11,0:10:0:0,0,0	0/0:12,0:12:15.59:0,16,99	./.	0/0:26,0:26:15.50:0,16,132	0/0:17,0:17:27.06:0,27,188	0/0:1,0:1:0:0,0,0	1/1:4,9:12:20.55:376,21,0	1/1:15,0:15:35.53:352,36,0	1/1:5,0:5:12.04:191,12,0
chr10	6015372	.	T	TTATA	3865.14	PASS	AB=0.947;AC=21;AF=0.375;AN=56;BaseQRankSum=2.711;DP=445;FS=59.967;HRun=0;HaplotypeScore=137.8041;InbreedingCoeff=0.8654;MQ=64.01;MQ0=0;MQRankSum=-8.182;QD=38.27;ReadPosRankSum=-6.110;VQSLOD=0.6925;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,0:12:28.25:137,28,0	0/0:7,0:7:15.05:0,15,261	0/0:12,0:8:21.07:0,21,362	0/1:17,0:11:41.59:42,0,149	0/0:27,0:27:68.99:0,69,1054	1/1:1,8:9:24.08:579,24,0	1/1:2,2:6:8.78:165,9,0	0/0:23,0:23:57.19:0,57,979	1/1:1,1:3:3.01:70,3,0	0/0:29,0:29:72.23:0,72,1199	0/0:29,0:29:68.68:0,69,1079	0/0:26,0:26:30.10:0,30,512	0/0:29,0:29:69.07:0,69,1150	0/0:28,0:28:78.22:0,78,1282	1/1:2,9:12:27.09:645,27,0	1/1:5,2:8:12.04:273,12,0	0/0:17,0:17:39.13:0,39,668	0/0:18,0:18:36.12:0,36,626	1/1:2,10:12:30.10:760,30,0	1/1:1,11:12:30.10:700,30,0	0/0:13,0:13:33.11:0,33,548	1/1:0,3:3:9.03:215,9,0	0/0:29,0:29:51.05:0,51,850	0/0:14,0:14:33.07:0,33,542	1/1:2,4:6:12.04:280,12,0	0/0:16,0:16:48.13:0,48,798	0/0:19,0:17:51.13:0,51,854	0/0:8,0:8:18.06:0,18,313
chr10	6015713	.	TTGTGTGTGTGTGTG	T	2786.76	PASS	AC=20;AF=0.370;AN=54;BaseQRankSum=6.859;DP=573;FS=8.602;HRun=0;HaplotypeScore=208.7362;InbreedingCoeff=0.7952;MQ=58.13;MQ0=10;MQRankSum=-6.245;QD=14.36;ReadPosRankSum=0.202;VQSLOD=1.6495;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:40,8:48:5.97:137,6,0	0/0:10,0:10:12.04:0,12,686	0/0:21,0:16:3.01:0,3,71	0/0:25,0:18:3.01:0,3,43	0/0:20,0:20:15.04:0,15,701	1/1:8,6:14:6.02:234,6,0	1/1:16,5:21:4.83:122,5,0	0/0:15,0:14:6.02:0,6,135	1/1:10,3:13:6.02:234,6,0	0/0:22,0:22:30.10:0,30,1215	0/0:18,0:18:20.49:0,20,1099	0/0:20,0:20:18.04:0,18,874	0/0:15,0:15:24.08:0,24,1169	0/0:17,0:16:15.52:0,16,797	1/1:11,7:18:18.06:683,18,0	1/1:14,8:23:21.07:795,21,0	0/0:31,0:32:62.70:0,63,3167	0/0:36,0:39:58.74:0,59,3003	1/1:7,2:9:6.02:162,6,0	1/1:14,1:15:6.01:90,6,0	0/0:24,0:23:32.96:0,33,1905	1/1:15,0:16:7.84:167,8,0	0/0:23,0:24:30.10:0,30,1745	0/0:31,0:30:48.16:0,48,2659	1/1:9,6:15:9.03:351,9,0	0/0:21,0:25:30.06:0,30,696	0/0:12,0:16:19.57:0,20,309	./.
chr10	6015904	.	AC	A	10105.10	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=20.432;DP=778;FS=6.634;HRun=2;HaplotypeScore=124.0681;InbreedingCoeff=0.9986;MQ=84.75;MQ0=0;MQRankSum=-5.689;QD=36.22;ReadPosRankSum=3.132;VQSLOD=4.1144;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,58:58:99:2142,168,0	0/0:13,0:13:39.12:0,39,562	0/0:22,0:22:63.14:0,63,894	0/0:30,0:31:69.86:0,70,1064	0/0:30,0:30:87.26:0,87,1260	1/1:0,21:21:63.20:817,63,0	1/1:1,26:27:78.25:1012,78,0	0/0:27,0:27:81.27:0,81,1195	1/1:0,25:25:69.22:896,69,0	0/0:28,0:28:84.23:0,84,1214	0/0:13,0:13:39.13:0,39,584	0/0:35,0:35:96.33:0,96,1438	0/0:32,0:32:96.29:0,96,1380	0/0:28,0:28:78.25:0,78,1144	1/1:4,37:41:99:1402,108,0	1/1:1,39:40:99:1441,111,0	0/0:32,0:32:93.30:0,93,1374	0/0:27,0:27:81.25:0,81,1185	1/1:0,6:6:18.06:234,18,0	1/1:1,21:22:63.20:818,63,0	0/0:62,0:62:99:0,181,2652	1/1:0,10:10:30.10:389,30,0	0/0:29,0:29:87.29:0,87,1303	0/0:25,0:23:66.22:0,66,989	1/1:0,29:29:75.20:955,75,0	0/0:25,0:25:72.24:0,72,1077	0/0:30,0:29:90.27:0,90,1317	0/0:10,0:10:27.09:0,27,405
chr10	6016336	.	CAGCAGAGTCATCTTGCTA	C	5756.67	PASS	AB=0.600;AC=7;AF=0.125;AN=56;BaseQRankSum=10.658;DP=773;FS=0.584;HRun=0;HaplotypeScore=411.1003;InbreedingCoeff=0.8255;MQ=91.76;MQ0=0;MQRankSum=-8.000;QD=94.37;ReadPosRankSum=1.820;VQSLOD=3.3383;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,132,11097	0/0:17,0:17:51.18:0,51,4306	0/0:39,0:39:99:0,110,6454	0/0:27,0:27:60.16:0,60,4704	0/0:21,0:21:60.21:0,60,4810	0/0:14,0:14:42.14:0,42,3265	0/0:32,0:32:93.32:0,93,7079	1/1:8,9:17:27.09:1105,27,0	0/0:25,0:25:72.25:0,72,5130	0/0:30,0:30:90.31:0,90,7277	0/0:19,0:19:57.18:0,57,4210	0/0:40,0:40:99:0,117,8748	0/0:25,0:25:75.26:0,75,5801	0/0:35,0:35:99:0,99,7754	0/0:38,0:38:99:0,114,9203	0/0:35,0:35:99:0,105,8321	0/0:30,0:30:87.30:0,87,7187	0/0:17,0:17:51.15:0,51,4081	0/0:24,0:24:66.23:0,66,4727	0/0:23,0:23:66.23:0,66,5372	0/0:61,0:61:99:0,181,14921	0/0:30,0:30:81.28:0,81,6105	0/0:24,0:24:69.22:0,69,5124	0/0:34,0:34:99:0,99,8075	0/0:25,0:25:72.25:0,72,5732	0/1:5,10:15:99:1285,0,231	1/1:6,19:25:54.02:2744,54,0	1/1:0,4:4:12.04:624,12,0
chr10	6017537	.	AACAATCACCGGTGAAGCATCACAGGTG	A	9241.01	PASS	AB=0.748;AC=24;AF=0.480;AN=50;BaseQRankSum=10.256;DP=576;FS=1.112;HRun=0;HaplotypeScore=209.6257;InbreedingCoeff=0.6575;MQ=39.34;MQ0=47;MQRankSum=-5.480;QD=25.81;ReadPosRankSum=1.185;VQSLOD=3.6473;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:2:3:0,3,26	1/1:1,11:11:15.05:659,15,0	0/0:22,0:9:17.74:0,18,284	0/0:16,0:10:24.07:0,24,625	0/1:2,29:30:57.58:310,0,58	./.	./.	0/0:31,0:23:66.23:0,66,3080	0/0:9,0:4:6.02:0,6,463	1/1:4,30:33:66.12:1868,66,0	1/1:4,17:19:12.04:315,12,0	1/1:6,42:44:21.07:1217,21,0	1/1:5,40:42:21.05:1387,21,0	1/1:4,39:41:39.13:2470,39,0	0/0:29,0:14:24.04:0,24,1042	0/0:22,0:11:23.93:0,24,938	1/1:7,16:19:6.02:225,6,0	1/1:1,7:7:3.01:220,3,0	0/0:9,0:4:12.04:0,12,567	0/0:6,0:5:9.03:0,9,366	1/1:11,0:5:3.01:78,3,0	0/0:4,0:4:6.02:0,6,231	1/1:1,16:17:15.05:359,15,0	1/1:2,12:12:2.94:18,3,0	./.	0/1:45,1:37:99:115,0,8259	0/0:35,0:33:66.21:0,66,4324	0/0:16,0:11:30.10:0,30,2908
chr10	6017540	.	A	AT	284.62	PASS	AB=0.933;AC=9;AF=0.188;AN=48;BaseQRankSum=4.912;DP=543;FS=10.645;HRun=0;HaplotypeScore=101.9574;InbreedingCoeff=-0.0929;MQ=39.29;MQ0=49;MQRankSum=-5.127;QD=1.90;ReadPosRankSum=-2.943;VQSLOD=0.9635;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:3,1:2:3.01:48,3,0	0/1:11,0:11:15.58:16,0,27	0/0:16,0:4:2.21:0,2,31	0/0:15,0:9:20.90:0,21,253	0/1:30,0:29:25.99:38,0,26	./.	./.	0/0:32,0:23:69.22:0,69,945	0/0:8,0:3:6.02:0,6,84	0/0:31,0:30:41.10:0,41,262	0/1:20,0:18:10.74:11,0,30	0/0:44,0:41:8.16:0,8,64	0/0:42,0:39:1.50:0,1,37	0/0:41,0:40:5.48:0,5,86	0/1:20,8:13:99:119,0,185	0/1:14,7:11:99:122,0,146	0/1:20,0:17:11.72:12,0,16	0/0:8,0:7:2.04:0,2,6	0/0:7,1:4:12.04:0,12,168	0/0:7,0:6:6.02:0,6,84	0/0:13,0:5:2.98:0,3,21	0/0:1,1:3:3.01:0,3,41	0/1:16,0:16:7.73:43,0,8	./.	./.	0/0:46,0:36:99:0,105,1412	0/0:34,0:32:63.21:0,63,881	0/0:16,0:11:30.10:0,30,420
chr10	6017649	.	GCATCACAAATGACAATCACAGATGAAGCATCACAAGTGACAATCACAGGTGACA	G	4465.81	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-5.513;DP=838;FS=37.228;HRun=0;HaplotypeScore=593.5602;InbreedingCoeff=0.9393;MQ=43.44;MQ0=122;MQRankSum=-0.697;QD=24.67;ReadPosRankSum=3.853;VQSLOD=0.3214;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:13:27.08:500,27,0	0/0:13,0:11:16.89:0,17,698	0/0:32,0:8:24.08:0,24,403	0/0:24,0:5:14.84:0,15,211	0/0:34,0:25:45.01:0,45,1643	1/1:10,0:7:9.03:228,9,0	1/1:17,0:9:9.03:205,9,0	0/0:39,0:36:4:0,4,29	1/1:15,0:14:26.97:590,27,0	0/0:51,0:38:70.09:0,70,2336	0/0:16,0:13:24.06:0,24,1210	0/0:56,0:47:87.94:0,88,2624	0/0:58,0:40:59.06:0,59,2531	0/0:53,0:41:63.94:0,64,3134	1/1:25,0:21:45:786,45,0	1/1:18,0:17:39.12:772,39,0	0/0:37,0:28:45.59:0,46,2103	0/0:28,0:18:33.05:0,33,1214	1/1:11,5:9:21.06:398,21,0	1/1:1,18:19:21.07:338,21,0	0/0:74,0:45:74.06:0,74,2822	1/1:5,27:31:27.52:336,28,0	0/0:23,0:17:24.52:0,25,831	0/0:41,0:34:25.26:0,25,2385	1/1:10,0:10:8.39:313,8,0	0/0:34,0:24:46.39:0,46,2314	0/0:37,0:28:46.20:0,46,1911	0/0:7,0:5:12:0,12,307
chr10	6017915	.	ATGACAATCACAGGTGAAGCATCACAAG	A	8711.22	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=15.728;DP=927;FS=7.761;HRun=0;HaplotypeScore=583.8296;InbreedingCoeff=0.9930;MQ=59.22;MQ0=7;MQRankSum=-6.978;QD=31.68;ReadPosRankSum=-7.045;VQSLOD=-0.3185;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:35,0:35:83.41:1244,83,0	0/0:16,0:16:36.11:0,36,1319	0/0:33,0:15:16.27:0,16,301	0/0:35,0:22:28.82:0,29,675	0/0:32,0:32:63.01:0,63,2758	1/1:14,0:14:32.88:533,33,0	1/1:20,0:20:44.87:714,45,0	0/0:34,0:34:79.45:0,79,2277	1/1:26,0:26:65.83:1122,66,0	0/0:44,0:43:99:0,102,5680	0/0:24,0:24:54.04:0,54,2198	0/0:41,0:41:93.24:0,93,4309	0/0:46,0:46:99:0,123,6941	0/0:53,0:53:99:0,141,6931	1/1:34,0:33:86.66:1379,87,0	1/1:33,0:33:71.88:1432,72,0	0/0:31,0:31:87.16:0,87,3992	0/0:30,0:29:84.22:0,84,3568	1/1:3,20:23:59.98:922,60,0	1/1:13,23:33:29.85:313,30,0	0/0:61,0:61:99:0,165,6611	1/1:5,20:25:11.93:92,12,0	0/0:28,0:28:69.15:0,69,3215	0/0:42,0:42:99:0,102,4867	1/1:29,0:29:56.91:960,57,0	0/0:49,0:48:99:0,120,6362	0/0:38,0:37:96.23:0,96,4130	0/0:15,0:15:24.06:0,24,1090
chr10	6019347	.	CACACACACATACGTGCATAT	C	5392.27	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=11.114;DP=820;FS=0.000;HRun=0;HaplotypeScore=359.4176;InbreedingCoeff=0.9406;MQ=64.91;MQ0=6;MQRankSum=-7.594;QD=23.14;ReadPosRankSum=-0.018;VQSLOD=1.8652;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:19,3:22:19.82:361,20,0	0/0:19,0:19:48.16:0,48,3009	0/0:54,0:32:47.73:0,48,1112	0/0:56,0:31:58.87:0,59,1523	0/0:29,0:29:78.27:0,78,4190	1/1:3,28:31:18.06:992,18,0	1/1:14,0:14:21.52:340,22,0	0/0:49,0:49:99:0,123,3237	1/1:2,28:30:12.04:662,12,0	0/0:38,0:38:99:0,108,4782	0/0:22,0:22:60.16:0,60,3047	0/0:29,0:29:84.25:0,84,4262	0/0:38,0:38:99:0,102,5556	0/0:40,0:40:99:0,115,6557	1/1:7,23:30:12.04:662,12,0	1/1:3,29:32:15.05:827,15,0	0/0:32,0:32:76.67:0,77,3931	0/0:23,0:23:57.11:0,57,3208	1/1:1,11:12:32.96:593,33,0	1/1:3,22:25:6.02:331,6,0	0/0:42,0:42:99:0,120,6962	1/1:2,16:18:6.02:271,6,0	0/0:21,0:21:51.17:0,51,2231	0/0:31,0:31:87.25:0,87,4316	1/1:4,15:19:9:353,9,0	0/0:31,0:31:87.25:0,87,3919	0/0:29,0:29:87.28:0,87,5215	0/0:4,0:4:12.03:0,12,881
chr10	6019491	.	AG	A	8728.28	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=15.066;DP=709;FS=13.746;HRun=1;HaplotypeScore=85.8708;InbreedingCoeff=0.9999;MQ=75.12;MQ0=0;MQRankSum=-8.052;QD=37.78;ReadPosRankSum=2.410;VQSLOD=4.1485;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,24:24:69.13:919,69,0	0/0:10,0:10:30.10:0,30,479	0/0:32,0:31:92:0,92,1312	0/0:21,0:20:57.14:0,57,824	0/0:32,0:32:96.31:0,96,1507	1/1:0,22:22:66.22:922,66,0	1/1:0,20:20:51.17:713,51,0	0/0:31,0:31:90.28:0,90,1377	1/1:1,27:28:64.82:967,65,0	0/0:33,0:33:99:0,99,1562	0/0:23,0:23:69.20:0,69,1054	0/0:33,0:33:99:0,99,1496	0/0:29,0:29:87.24:0,87,1333	0/0:31,0:31:93.28:0,93,1434	1/1:0,35:35:90.27:1237,90,0	1/1:0,20:20:54.18:754,54,0	0/0:23,0:23:66.20:0,66,1011	0/0:29,0:29:87.24:0,87,1318	1/1:0,22:22:63.19:851,63,0	1/1:0,28:27:78.23:1065,78,0	0/0:18,0:18:48.16:0,48,754	1/1:0,13:13:36.12:504,36,0	0/0:26,0:26:78.25:0,78,1223	0/0:23,0:23:69.20:0,69,1054	1/1:0,19:19:57.19:797,57,0	0/0:28,0:28:84.27:0,84,1320	0/0:30,0:30:90.31:0,90,1433	0/0:25,0:25:75.20:0,75,1135
chr10	6019673	.	AAGCCACTG	A	7300.76	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=14.339;DP=490;FS=0.000;HRun=0;HaplotypeScore=139.0720;InbreedingCoeff=0.9920;MQ=74.82;MQ0=0;MQRankSum=-13.130;QD=42.69;ReadPosRankSum=2.570;VQSLOD=4.7235;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,17:26:36.12:932,36,0	0/0:7,0:7:21.07:0,21,880	0/0:21,0:21:29.97:0,30,1058	0/0:11,0:11:15.05:0,15,496	0/0:17,0:17:42.14:0,42,1760	1/1:5,13:18:39.13:988,39,0	1/1:11,6:17:21.07:542,21,0	0/0:29,0:29:63.21:0,63,2402	1/1:6,10:16:30.10:755,30,0	0/0:20,0:20:54.19:0,54,2131	0/0:12,0:12:24.08:0,24,1003	0/0:11,0:11:24.08:0,24,1006	0/0:16,0:16:45.15:0,45,1854	0/0:25,0:25:54.19:0,54,2245	1/1:1,12:13:36.12:909,36,0	1/1:1,8:9:21.07:544,21,0	0/0:29,0:29:72.23:0,72,2859	0/0:9,0:9:24.08:0,24,1006	1/1:12,9:21:26.98:448,27,0	1/1:7,10:17:27.09:676,27,0	0/0:26,0:26:69.24:0,69,2745	1/1:4,9:13:18.06:441,18,0	0/0:18,0:18:36.12:0,36,1454	0/0:18,0:18:45.15:0,45,1780	1/1:2,19:21:42.14:1067,42,0	0/0:27,0:27:60.21:0,60,2289	0/0:17,0:17:36.12:0,36,1509	0/0:6,0:6:18.06:0,18,754
chr10	6020219	.	T	TAAA	8413.63	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-4.295;DP=645;FS=4.613;HRun=9;HaplotypeScore=97.2081;InbreedingCoeff=0.9910;MQ=76.48;MQ0=0;MQRankSum=-2.387;QD=33.93;ReadPosRankSum=-1.884;VQSLOD=3.9507;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,0:32:66.99:508,67,0	0/0:11,0:11:27.07:0,27,340	0/0:16,0:16:29.99:0,30,335	0/0:13,0:13:19.41:0,19,188	0/0:20,0:20:14.64:0,15,430	1/1:4,20:25:54.16:1010,54,0	1/1:4,11:16:24.08:473,24,0	0/0:34,0:35:78.19:0,78,974	1/1:7,0:13:24.08:372,24,0	0/0:29,0:29:69.13:0,69,856	0/0:17,0:17:39.01:0,39,466	0/0:27,0:27:78.23:0,78,971	0/0:34,0:34:87.21:0,87,1082	0/0:28,0:28:61.69:0,62,861	1/1:7,19:27:45.15:888,45,0	1/1:7,25:32:60.21:1164,60,0	0/0:21,0:21:57.15:0,57,719	0/0:10,0:10:27.04:0,27,322	1/1:12,12:25:51.17:940,51,0	1/1:7,19:31:78.05:1247,78,0	0/0:27,0:27:75.20:0,75,918	1/1:5,17:24:55.37:947,55,0	0/0:20,0:20:54.14:0,54,677	0/0:31,0:31:87.23:0,87,1068	1/1:5,17:23:49.37:865,49,0	0/0:24,0:24:59.79:0,60,717	0/0:29,0:29:72.19:0,72,908	0/0:5,0:5:12.02:0,12,152
chr10	6020733	.	G	GCA	12818.72	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-17.826;DP=928;FS=4.053;HRun=0;HaplotypeScore=105.2411;InbreedingCoeff=0.9969;MQ=62.93;MQ0=6;MQRankSum=-0.435;QD=39.32;ReadPosRankSum=4.722;VQSLOD=6.8748;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,45:50:99:2141,120,0	0/0:9,0:9:27.06:0,27,357	0/0:41,0:26:42.48:0,42,527	0/0:34,0:19:14.17:0,14,421	0/0:34,0:34:99:0,99,1362	1/1:2,24:26:51.17:898,51,0	1/1:4,35:39:78.27:1405,78,0	0/0:49,0:49:99:0,129,1731	1/1:1,22:23:51.17:899,51,0	0/0:35,0:35:99:0,102,1390	0/0:22,0:22:57.19:0,57,795	0/0:41,0:41:99:0,105,1451	0/0:34,0:34:99:0,102,1409	0/0:22,0:22:60.20:0,60,839	1/1:3,32:35:60.12:1044,60,0	1/1:2,35:36:87.30:1567,87,0	0/0:28,0:28:81.23:0,81,1101	0/0:23,0:23:66.15:0,66,873	1/1:3,19:22:60.15:932,60,0	1/1:2,29:31:75.26:1351,75,0	0/0:55,0:55:99:0,166,2286	1/1:2,24:26:63.22:1125,63,0	0/0:28,0:28:75.23:0,75,1027	0/0:48,0:48:99:0,135,1843	1/1:1,34:36:81.28:1458,81,0	0/0:40,0:40:99:0,111,1459	0/0:44,0:44:99:0,129,1727	0/0:11,0:11:33.11:0,33,461
chr10	6021735	.	G	GCCACAAGCCCCTTTTATTTCCAGA	2434.81	PASS	AB=0.692;AC=29;AF=0.967;AN=30;BaseQRankSum=-1.871;DP=41;FS=7.464;HRun=0;HaplotypeScore=36.5884;InbreedingCoeff=-0.1893;MQ=104.33;MQ0=0;MQRankSum=-1.455;QD=62.43;ReadPosRankSum=-1.122;VQSLOD=0.4373;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	./.	1/1:0,0:3:9.02:302,9,0	0/1:5,1:9:18.22:1132,0,18	1/1:2,0:2:6.01:77,6,0	1/1:3,0:3:3.01:51,3,0	1/1:1,0:1:3.01:41,3,0	1/1:4,0:4:9.02:157,9,0	./.	1/1:2,0:2:6.02:130,6,0	./.	1/1:1,0:1:3.01:47,3,0	1/1:1,0:1:3.01:38,3,0	./.	./.	1/1:3,0:3:3.01:53,3,0	./.	1/1:3,0:3:6.02:315,6,0	./.	./.	./.	1/1:1,0:1:3:26,3,0	./.	1/1:3,0:3:3.01:75,3,0	1/1:2,0:2:3:25,3,0	1/1:1,0:1:3.01:48,3,0	./.	./.
chr10	6022352	.	AGGT	A	21115.69	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=6.212;DP=665;FS=0.000;HRun=0;HaplotypeScore=115.5356;InbreedingCoeff=0.9750;MQ=92.79;MQ0=0;MQRankSum=-10.647;QD=39.92;ReadPosRankSum=6.735;VQSLOD=5.7943;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,32:36:81.15:1205,81,0	1/1:1,7:8:15.05:241,15,0	0/0:36,0:36:99:0,102,2124	0/0:26,0:26:63.19:0,63,1289	1/1:2,17:19:45.15:713,45,0	1/1:2,13:15:36.12:578,36,0	1/1:1,29:30:75.26:1205,75,0	0/0:23,0:23:57.19:0,57,1220	1/1:0,25:25:63.21:1012,63,0	1/1:3,12:15:42.14:674,42,0	1/1:1,11:12:33.11:530,33,0	1/1:3,29:32:87.25:1370,87,0	1/1:2,33:35:93.32:1495,93,0	1/1:0,28:28:81.28:1301,81,0	1/1:1,37:38:99:1736,108,0	1/1:1,22:23:60.20:964,60,0	1/1:3,38:41:93.32:1495,93,0	1/1:0,27:27:75.22:1178,75,0	1/1:1,17:18:42.14:667,42,0	1/1:3,13:16:45.02:637,45,0	1/1:4,27:31:72.63:1100,73,0	1/1:0,23:24:66.18:1020,66,0	1/1:3,13:16:32.78:502,33,0	1/1:0,29:29:69.23:1097,69,0	1/1:0,11:11:29.97:397,30,0	0/0:14,0:14:36.12:0,36,767	0/0:35,0:35:99:0,105,2257	0/0:2,0:2:6.02:0,6,132
chr10	6022356	.	GGT	G	4038.64	PASS	AB=0.982;AC=36;AF=0.643;AN=56;BaseQRankSum=15.958;DP=673;FS=9.186;HRun=0;HaplotypeScore=161.3447;InbreedingCoeff=0.3527;MQ=94.65;MQ0=0;MQRankSum=-6.891;QD=7.56;ReadPosRankSum=11.550;VQSLOD=0.8920;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:36,1:37:77.74:180,0,78	1/1:7,0:7:13.39:55,13,0	0/0:38,0:38:99:0,114,2102	0/0:29,0:29:72.21:0,72,1237	1/1:18,0:18:37.50:155,37,0	0/1:15,0:15:1.45:97,0,1	1/1:31,0:31:33.24:241,33,0	0/0:22,0:22:60.20:0,60,1108	0/1:27,0:27:10.91:171,0,11	1/1:14,2:16:38.35:164,38,0	1/1:13,0:13:2.04:91,2,0	1/1:29,1:30:60.91:293,61,0	1/1:33,0:33:83.03:342,83,0	1/1:29,0:29:41:265,41,0	1/1:39,0:39:28.73:324,29,0	0/1:24,0:24:11.84:161,0,12	1/1:42,0:42:51.54:312,52,0	0/1:29,0:29:15.34:192,0,15	1/1:19,0:19:3.74:133,4,0	0/1:13,2:15:9.73:100,0,10	0/1:31,0:31:35.93:176,0,36	1/1:25,0:25:20.89:200,21,0	1/1:13,1:14:12.69:94,13,0	1/1:29,0:29:58.50:242,58,0	0/1:11,0:11:23.65:50,0,24	0/0:13,0:13:36.12:0,36,685	0/0:35,0:35:99:0,105,1981	0/0:2,0:2:6.02:0,6,116
chr10	6023334	.	A	AAGG	12480.69	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-9.091;DP=756;FS=2.248;HRun=0;HaplotypeScore=105.9621;InbreedingCoeff=0.9984;MQ=65.82;MQ0=1;MQRankSum=0.233;QD=40.92;ReadPosRankSum=2.831;VQSLOD=5.8687;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,31:39:57.17:1106,57,0	0/0:10,0:10:18.06:0,18,267	0/0:28,0:22:27.09:0,27,401	0/0:33,0:29:25.88:0,26,392	0/0:26,0:26:57.10:0,57,777	1/1:5,26:32:54.19:1125,54,0	1/1:6,22:28:48.16:980,48,0	0/0:32,0:32:55.28:0,55,1028	1/1:4,23:27:63.22:1313,63,0	0/0:29,0:29:66.21:0,66,939	0/0:17,0:17:48.16:0,48,710	0/0:33,0:33:81.25:0,81,1164	0/0:31,0:31:78.24:0,78,1119	0/0:33,0:33:87.14:0,87,1109	1/1:5,25:32:75.26:1558,75,0	1/1:6,27:34:66.23:1376,66,0	0/0:22,0:22:53.15:0,53,753	0/0:17,0:17:36.09:0,36,511	1/1:10,17:28:57.17:1099,57,0	1/1:6,22:28:66.05:1215,66,0	0/0:24,0:24:51.17:0,51,757	1/1:5,25:30:69.18:1395,69,0	0/0:23,0:23:48.13:0,48,688	0/0:32,0:32:92.93:0,93,1280	1/1:3,24:27:63.22:1313,63,0	0/0:18,0:18:48.15:0,48,690	0/0:23,0:23:63.18:0,63,895	0/0:19,0:19:42.11:0,42,600
chr10	6023606	.	ACTTCCCAG	A	15100.16	PASS	AB=0.958;AC=25;AF=0.446;AN=56;BaseQRankSum=18.534;DP=671;FS=2.742;HRun=0;HaplotypeScore=183.1906;InbreedingCoeff=0.9108;MQ=72.91;MQ0=0;MQRankSum=-18.264;QD=58.30;ReadPosRankSum=2.338;VQSLOD=4.7790;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,108,4490	1/1:1,10:11:27.09:764,27,0	0/0:20,0:20:54.02:0,54,1928	0/0:17,0:17:48.14:0,48,1663	1/1:2,27:29:69.24:1908,69,0	0/0:33,0:33:93.32:0,93,4080	0/0:20,0:20:51.18:0,51,2261	0/0:44,0:44:99:0,126,5310	0/0:28,0:28:84.27:0,84,3600	1/1:1,25:26:75.26:2095,75,0	1/1:2,17:19:42.14:1148,42,0	1/1:2,31:33:78.23:2204,78,0	1/1:5,25:30:75.24:2119,75,0	1/1:1,18:19:42.14:1161,42,0	0/0:27,0:27:81.28:0,81,3576	0/0:24,0:24:72.23:0,72,3084	1/1:3,15:18:30.10:849,30,0	1/1:2,5:7:15.05:424,15,0	0/0:23,0:23:63.22:0,63,2732	0/0:39,0:39:99:0,111,4847	1/1:3,4:7:6.02:170,6,0	0/0:30,0:30:90.31:0,90,3681	1/1:1,25:26:66.23:1818,66,0	1/1:1,10:11:15.99:426,16,0	0/0:18,0:18:51.18:0,51,2191	0/1:22,1:23:15.66:16,0,2691	0/0:33,0:32:90.31:0,90,3909	0/0:18,0:18:50.04:0,50,2179
chr10	6025816	.	GCA	G	12909.08	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=18.888;DP=1147;FS=1.079;HRun=0;HaplotypeScore=150.3081;InbreedingCoeff=0.9925;MQ=58.89;MQ0=12;MQRankSum=-1.080;QD=27.01;ReadPosRankSum=5.560;VQSLOD=5.9105;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:38:79.78:0,80,1312	1/1:1,13:13:30.10:386,30,0	0/0:51,0:27:68.40:0,68,1011	0/0:45,1:35:36.74:0,37,1050	1/1:8,36:44:72.23:927,72,0	0/0:28,0:28:72.25:0,72,1203	0/0:29,0:29:66.23:0,66,1107	0/0:45,0:45:99:0,99,1698	0/0:79,0:79:99:0,205,3367	1/1:6,53:58:99:1979,148,0	1/1:2,20:22:51.17:656,51,0	1/1:11,31:42:78.25:1003,78,0	1/1:4,55:58:99:1698,132,0	1/1:5,51:55:99:1658,129,0	0/0:71,0:71:99:0,190,3144	0/0:61,0:61:99:0,153,2480	1/1:4,16:19:26.29:379,26,0	1/1:3,13:16:10.39:363,10,0	0/0:22,0:22:45.13:0,45,721	0/0:42,0:42:99:0,114,1859	1/1:8,72:77:99:2123,165,0	0/0:38,0:38:99:0,108,1790	1/1:3,24:28:54.18:695,54,0	1/1:3,35:38:81.26:1042,81,0	0/0:30,0:30:66.23:0,66,1114	0/0:45,0:45:76.25:0,76,1815	0/0:30,0:30:69.24:0,69,1136	0/0:13,0:13:18.08:0,18,418
chr10	6025981	.	TAC	T	3616.40	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=13.350;DP=905;FS=5.416;HRun=0;HaplotypeScore=107.4305;InbreedingCoeff=0.9999;MQ=59.41;MQ0=8;MQRankSum=3.227;QD=25.65;ReadPosRankSum=-0.469;VQSLOD=4.6304;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:31:69.16:0,69,1037	0/0:16,0:16:45.13:0,45,683	0/0:34,0:17:36.05:0,36,623	0/0:24,0:17:42.12:0,42,646	0/0:35,0:35:84.29:0,84,1367	0/0:37,0:37:86.47:0,86,1428	0/0:30,0:30:65.65:0,66,1000	1/1:11,29:40:83.88:985,84,0	0/0:38,0:38:93.24:0,93,1461	0/0:50,0:50:99:0,135,2202	0/0:23,0:23:60.20:0,60,979	0/0:19,0:19:48.13:0,48,734	0/0:48,0:48:99:0,117,1886	0/0:47,0:47:99:0,135,2151	0/0:37,0:37:99:0,99,1600	0/0:39,0:39:99:0,100,1592	0/0:30,0:30:75.21:0,75,1184	0/0:17,0:16:39.04:0,39,582	0/0:20,0:21:37.03:0,37,760	0/0:35,0:35:99:0,105,1747	0/0:36,0:36:68.74:0,69,1345	0/0:27,0:27:78.21:0,78,1190	0/0:34,1:35:58.11:0,58,1438	0/0:20,0:20:42.12:0,42,673	0/0:34,0:34:90.25:0,90,1436	1/1:4,35:38:99:1257,102,0	1/1:8,29:36:63.20:802,63,0	1/1:3,22:25:45.13:573,45,0
chr10	6026734	.	C	CA	1375.26	PASS	AB=1.000;AC=10;AF=0.179;AN=56;BaseQRankSum=-5.979;DP=639;FS=4.073;HRun=0;HaplotypeScore=79.0576;InbreedingCoeff=0.0397;MQ=76.31;MQ0=0;MQRankSum=-4.493;QD=5.93;ReadPosRankSum=-4.992;VQSLOD=2.2172;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,30:31:81.28:1284,81,0	0/0:9,0:9:27.08:0,27,358	0/0:27,0:27:28.70:0,29,657	0/0:13,0:11:19.69:0,20,202	0/0:32,0:32:93.25:0,93,1226	0/0:22,0:22:10.25:0,10,62	0/1:12,0:12:17.65:29,0,18	0/0:20,0:20:60.20:0,60,822	0/1:30,0:30:61.94:68,0,62	0/0:18,0:18:51.15:0,51,671	0/0:26,0:26:78.17:0,78,1024	0/0:24,0:24:72.24:0,72,1002	0/0:14,0:14:42.14:0,42,584	0/0:15,0:15:45.13:0,45,592	0/1:33,0:33:22.07:22,0,61	0/1:25,0:25:7.74:8,0,51	0/0:34,0:34:99:0,102,1353	0/0:18,0:18:48.16:0,48,665	0/1:22,0:22:6.52:7,0,31	0/1:34,0:34:35.98:36,0,77	0/0:27,0:27:81.25:0,81,1096	0/1:23,0:23:32.79:33,0,43	0/0:23,0:23:69.20:0,69,924	0/0:22,0:22:66.20:0,66,899	0/1:22,0:21:36.73:37,0,37	0/0:31,0:31:93.29:0,93,1256	0/0:26,0:26:78.22:0,78,1063	0/0:6,0:6:18.04:0,18,231
chr10	6028661	.	G	GT	14503.06	PASS	AB=0.531;AC=51;AF=0.981;AN=52;BaseQRankSum=-1.907;DP=450;FS=0.000;HRun=0;HaplotypeScore=118.6332;InbreedingCoeff=-0.0185;MQ=44.94;MQ0=6;MQRankSum=-0.119;QD=32.81;ReadPosRankSum=-1.205;VQSLOD=3.8736;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,33:31:75.12:1057,75,0	1/1:0,10:10:30.03:425,30,0	./.	./.	1/1:1,15:14:24.04:334,24,0	1/1:0,22:22:60.13:871,60,0	1/1:0,14:14:33.11:493,33,0	1/1:12,1:13:35.73:468,36,0	1/1:1,11:11:27.03:360,27,0	1/1:0,12:10:30.07:405,30,0	1/1:0,10:10:24.08:369,24,0	1/1:0,19:19:48.16:720,48,0	1/1:0,16:16:44.74:676,45,0	1/1:0,21:21:48.16:701,48,0	1/1:0,7:7:18.02:243,18,0	1/1:1,22:23:60.19:869,60,0	1/1:4,12:15:21.07:313,21,0	0/1:2,15:16:3.93:394,0,4	1/1:2,6:7:18.05:253,18,0	1/1:0,16:16:45.02:615,45,0	1/1:0,17:17:39.09:553,39,0	1/1:0,20:17:48.12:694,48,0	1/1:0,19:18:42.10:612,42,0	1/1:0,15:14:36.05:511,36,0	1/1:0,22:21:51.13:734,51,0	1/1:2,24:20:54.18:810,54,0	1/1:0,29:27:66.06:995,66,0	1/1:7,0:7:3:26,3,0
chr10	6028662	.	C	CT	14462.59	PASS	AB=1.000;AC=51;AF=0.981;AN=52;BaseQRankSum=-1.790;DP=457;FS=0.000;HRun=0;HaplotypeScore=125.1529;InbreedingCoeff=-0.0241;MQ=43.86;MQ0=6;MQRankSum=-0.570;QD=32.21;ReadPosRankSum=-1.323;VQSLOD=4.0035;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:31,0:29:69.15:980,69,0	1/1:11,0:11:30.07:418,30,0	./.	./.	1/1:17,0:14:29.67:364,30,0	1/1:22,0:22:60.16:863,60,0	1/1:16,0:16:36.04:507,36,0	1/1:1,12:13:36.09:517,36,0	1/1:14,0:13:30.04:383,30,0	1/1:13,0:10:30.06:402,30,0	1/1:10,0:10:24.08:345,24,0	1/1:19,0:19:51.14:733,51,0	1/1:16,0:16:44.74:663,45,0	1/1:21,0:21:48.16:725,48,0	1/1:9,0:9:15.05:225,15,0	1/1:23,0:23:59.87:868,60,0	1/1:15,0:14:24.04:334,24,0	0/1:18,0:17:6.91:364,0,7	1/1:7,0:6:18.06:253,18,0	1/1:16,0:16:45.07:621,45,0	1/1:17,0:17:36.12:534,36,0	1/1:20,0:17:48.09:686,48,0	1/1:20,0:19:45.05:602,45,0	1/1:16,0:15:39.04:532,39,0	1/1:23,0:22:51.13:719,51,0	1/1:26,0:20:54.18:803,54,0	1/1:29,0:27:66.06:973,66,0	1/1:0,7:7:3.01:48,3,0
chr10	6028724	.	CA	C	1463.62	PASS	AB=0.874;AC=27;AF=0.482;AN=56;BaseQRankSum=3.132;DP=541;FS=0.000;HRun=16;HaplotypeScore=113.0308;InbreedingCoeff=0.4809;MQ=46.76;MQ0=2;MQRankSum=2.265;QD=4.56;ReadPosRankSum=3.139;VQSLOD=1.7924;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,13:23:35.16:223,35,0	0/0:12,0:12:22.10:0,22,161	1/1:4,0:3:2.78:13,3,0	0/1:4,1:5:12.35:12,0,26	0/0:33,2:33:4.58:0,5,303	1/1:8,6:13:17.38:105,17,0	1/1:13,6:21:2.70:82,3,0	0/1:26,5:29:8.27:8,0,265	1/1:9,8:17:28.21:164,28,0	0/0:22,1:20:2.85:0,3,121	0/0:17,1:18:10.74:0,11,156	0/0:22,0:22:44.15:0,44,318	0/0:27,1:28:8.62:0,9,216	0/0:20,0:20:28.71:0,29,218	1/1:13,4:17:14.02:82,14,0	1/1:11,14:25:12.06:221,12,0	0/1:17,3:20:21.63:22,0,147	0/0:10,0:8:5.94:0,6,41	1/1:8,8:16:14.54:154,15,0	1/1:16,6:23:26.25:135,26,0	0/0:9,0:9:19.70:0,20,109	1/1:14,9:22:23.74:149,24,0	0/1:24,4:27:16.48:16,0,251	0/0:15,0:14:26.24:0,26,188	1/1:9,15:23:40.91:251,41,0	0/0:19,0:15:2.60:0,3,134	0/1:22,1:21:19.11:19,0,99	0/0:7,1:8:4.19:0,4,132
chr10	6033102	.	A	AT	6983.39	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-14.587;DP=522;FS=4.032;HRun=6;HaplotypeScore=49.1507;InbreedingCoeff=0.9732;MQ=81.30;MQ0=0;MQRankSum=-0.372;QD=32.48;ReadPosRankSum=4.495;VQSLOD=4.9861;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:25.08:0,25,299	1/1:0,8:8:21.07:264,21,0	0/0:17,0:17:39.05:0,39,382	0/0:17,0:17:43.52:0,44,399	1/1:1,24:25:72.19:888,72,0	0/0:14,0:14:39.07:0,39,391	0/0:17,0:17:45.10:0,45,458	0/0:37,0:37:99:0,99,971	0/0:8,0:8:24.05:0,24,245	1/1:3,21:24:63.20:793,63,0	1/1:1,21:22:60.19:755,60,0	1/1:3,14:17:45.13:553,45,0	1/1:2,22:24:60.19:755,60,0	1/1:0,14:14:39.12:491,39,0	0/0:25,0:25:72.16:0,72,735	0/0:17,0:17:48.11:0,48,490	1/1:3,22:25:54.17:679,54,0	1/1:1,13:14:36.12:453,36,0	0/0:22,0:22:57.11:0,57,572	0/0:16,0:16:42.09:0,42,428	1/1:0,15:15:39.12:491,39,0	0/0:14,0:14:42.09:0,42,424	1/1:3,14:17:41.93:523,42,0	1/1:0,10:10:27.09:340,27,0	0/0:16,0:16:45.10:0,45,459	0/0:26,2:28:2.66:0,3,645	0/0:30,0:30:84.19:0,84,857	0/0:14,0:14:39.09:0,39,398
chr10	6033704	.	GAA	G	7310.91	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=6.190;DP=526;FS=0.000;HRun=10;HaplotypeScore=71.1459;InbreedingCoeff=0.9737;MQ=65.33;MQ0=1;MQRankSum=-0.405;QD=26.20;ReadPosRankSum=3.319;VQSLOD=4.8066;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:33:82.72:0,83,1166	0/0:8,0:8:21.07:0,21,331	0/0:9,0:9:21.05:0,21,299	0/0:7,0:7:14.52:0,15,172	0/0:26,0:27:68.58:0,69,944	1/1:1,8:9:24.06:268,24,0	1/1:7,22:29:60.14:669,60,0	1/1:6,24:30:72.14:785,72,0	1/1:0,15:15:36.10:401,36,0	0/0:13,0:14:36.12:0,36,551	0/0:14,0:14:42.10:0,42,633	0/0:12,0:12:36.05:0,36,517	0/0:14,0:14:27.09:0,27,420	0/0:13,0:14:41.61:0,42,598	1/1:3,19:23:54.09:659,54,0	1/1:4,18:23:38.99:479,39,0	0/0:23,0:23:57.19:0,57,903	0/0:17,0:18:51.14:0,51,725	1/1:3,21:24:63.15:695,63,0	1/1:6,19:25:54.11:597,54,0	0/0:11,0:11:33.11:0,33,522	1/1:0,25:24:60.13:668,60,0	0/0:20,0:20:51.13:0,51,728	0/0:23,0:23:54.14:0,54,829	1/1:1,19:20:48.12:535,48,0	1/1:2,16:18:3.51:484,4,0	1/1:1,24:25:60.02:669,60,0	1/1:0,13:13:36.10:401,36,0
chr10	6033898	.	G	GT	206.62	PASS	AB=0.883;AC=4;AF=0.083;AN=48;BaseQRankSum=-1.525;DP=338;FS=0.000;HRun=0;HaplotypeScore=119.6578;InbreedingCoeff=0.1067;MQ=41.06;MQ0=5;MQRankSum=-1.649;QD=2.62;ReadPosRankSum=0.523;VQSLOD=2.7682;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:8:2.22:0,2,7	0/0:5,1:6:1.91:0,2,6	0/0:11,0:8:16.05:0,16,86	0/1:11,0:6:22.09:22,0,80	0/1:17,1:18:3.01:7,0,3	./.	0/0:8,0:8:7.74:0,8,39	0/1:31,6:37:99:183,0,143	0/0:10,1:11:2.67:0,3,11	0/0:13,0:13:21.56:0,22,66	0/0:16,0:16:11.92:0,12,112	0/0:9,0:8:3.73:0,4,11	0/0:10,1:10:7.10:0,7,31	0/0:7,0:6:2.04:0,2,6	0/0:14,2:16:3.57:0,4,11	0/0:14,5:19:3.32:0,3,10	0/0:9,0:9:7.83:0,8,30	./.	0/1:8,5:12:6.03:91,0,6	0/0:17,0:17:5.91:0,6,21	0/0:15,1:16:7.94:0,8,33	0/0:17,0:17:1.55:0,2,4	0/0:16,0:15:1:0,1,4	./.	./.	0/0:15,0:15:19.32:0,19,130	0/0:9,0:9:0.47:0,0,1	0/0:9,0:9:4.66:0,5,13
chr10	6033900	.	TGA	T	779.36	PASS	AB=0.909;AC=32;AF=0.640;AN=50;BaseQRankSum=-0.823;DP=326;FS=7.328;HRun=0;HaplotypeScore=115.3320;InbreedingCoeff=0.1625;MQ=40.84;MQ0=5;MQRankSum=-3.042;QD=3.19;ReadPosRankSum=3.559;VQSLOD=1.4949;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:7,1:8:3.01:30,3,0	1/1:3,3:6:3.01:32,3,0	0/0:9,0:7:1.81:0,2,5	0/0:10,0:6:7.33:0,7,45	1/1:16,1:17:2.97:30,3,0	./.	0/1:8,0:8:12.11:12,0,30	0/1:28,6:34:24.18:225,0,24	0/0:11,0:11:0.47:0,0,1	1/1:12,1:13:21.90:107,22,0	1/1:11,5:16:12:109,12,0	1/1:8,1:8:5.04:37,5,0	1/1:11,0:10:2.01:8,2,0	1/1:6,1:6:2.84:14,3,0	0/1:14,2:16:0.33:27,0,0	1/1:16,2:18:4.92:38,5,0	1/1:9,0:9:3.98:18,4,0	./.	0/1:9,2:10:40.56:41,0,45	0/0:16,0:16:3.63:0,4,10	0/1:15,1:16:2.19:26,0,2	0/0:16,1:17:1.57:0,2,5	0/0:15,0:14:1.40:0,1,4	./.	0/1:12,1:13:0:0,0,0	1/1:13,2:15:14.34:100,14,0	1/1:7,1:8:3.01:36,3,0	1/1:9,0:9:1.69:11,2,0
chr10	6033911	.	GA	G	535.57	PASS	AB=1.000;AC=28;AF=0.824;AN=34;BaseQRankSum=-0.675;DP=47;FS=9.832;HRun=1;HaplotypeScore=21.8786;InbreedingCoeff=0.1827;MQ=86.20;MQ0=0;MQRankSum=-2.878;QD=15.30;ReadPosRankSum=1.030;VQSLOD=2.2068;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,1:2:3.01:32,3,0	1/1:0,2:2:3.01:31,3,0	0/1:2,0:2:13.91:14,0,42	0/0:5,0:3:5.18:0,5,28	1/1:0,1:1:3:28,3,0	./.	1/1:1,0:1:2.60:10,3,0	1/1:4,4:8:14.97:149,15,0	./.	1/1:0,1:1:3.01:38,3,0	1/1:0,5:5:12:106,12,0	1/1:1,1:2:3.01:31,3,0	0/1:1,0:1:0:0,0,0	./.	1/1:0,2:2:3.01:31,3,0	1/1:0,2:2:3.01:30,3,0	0/0:1,0:1:2.90:0,3,16	./.	./.	./.	1/1:2,1:3:3.01:31,3,0	./.	./.	./.	./.	1/1:0,2:2:6.02:72,6,0	1/1:0,1:1:3.01:35,3,0	./.
chr10	6033912	.	A	AG	413.19	PASS	AB=1.000;AC=25;AF=0.833;AN=30;BaseQRankSum=-0.962;DP=45;FS=6.038;HRun=1;HaplotypeScore=22.2487;InbreedingCoeff=0.1225;MQ=87.88;MQ0=0;MQRankSum=-2.467;QD=12.91;ReadPosRankSum=0.209;VQSLOD=1.9379;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,0:2:2.97:20,3,0	1/1:2,0:2:2.98:21,3,0	0/1:2,0:2:14:14,0,35	0/0:5,0:3:1.39:0,1,27	1/1:1,0:1:2.96:19,3,0	./.	./.	1/1:4,4:8:15.03:194,15,0	./.	1/1:1,0:1:3:28,3,0	1/1:5,0:5:11.39:58,11,0	1/1:2,0:2:2.97:20,3,0	./.	./.	1/1:2,0:2:2.97:20,3,0	1/1:2,0:2:2.97:20,3,0	0/0:1,0:1:3.01:0,3,35	./.	./.	./.	1/1:2,0:2:2.96:19,3,0	./.	./.	./.	./.	1/1:2,0:2:6:51,6,0	1/1:1,0:1:3:26,3,0	./.
chr10	6034065	.	G	GT	634.57	PASS	AB=0.835;AC=31;AF=0.554;AN=56;BaseQRankSum=6.553;DP=427;FS=6.214;HRun=0;HaplotypeScore=271.9364;InbreedingCoeff=-0.1208;MQ=49.19;MQ0=1;MQRankSum=-3.400;QD=1.78;ReadPosRankSum=-1.236;VQSLOD=1.9290;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:5,2:9:1.50:4,1,0	0/0:1,0:2:0:0,0,0	0/0:7,0:2:8.39:0,8,83	0/0:9,0:6:4.10:0,4,21	1/1:13,2:16:2.51:9,3,0	1/1:9,2:15:3.56:30,4,0	0/0:14,2:18:0.71:0,1,75	0/1:10,0:14:41.88:42,0,312	0/1:20,4:26:3.36:3,0,67	0/1:17,1:20:44.05:44,0,440	0/0:12,1:13:2.05:0,2,43	1/1:18,0:23:1.65:5,2,0	0/1:8,0:11:27.20:27,0,34	0/1:16,3:21:16.34:16,0,32	1/1:18,2:29:7.77:49,8,0	1/1:26,4:40:15.71:134,16,0	0/1:4,0:4:7.90:17,0,8	0/1:4,0:4:17.89:18,0,72	0/1:8,1:12:57.21:139,0,57	0/1:10,4:14:0.12:1,0,0	0/0:14,3:18:0.72:0,1,3	1/1:18,5:24:2.17:13,2,0	1/1:6,1:8:2.44:7,2,0	0/1:2,0:4:0.04:0,0,0	1/1:23,3:27:1.39:3,1,0	0/1:6,1:11:62.10:62,0,179	0/1:4,2:12:45.56:46,0,70	0/1:5,4:10:99:99,0,160
chr10	6034067	.	T	TGA	60.97	PASS	AB=0.970;AC=18;AF=0.321;AN=56;BaseQRankSum=5.835;DP=448;FS=1.670;HRun=0;HaplotypeScore=292.7454;InbreedingCoeff=0.1602;MQ=51.22;MQ0=1;MQRankSum=-0.591;QD=0.25;ReadPosRankSum=-3.558;VQSLOD=1.8567;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,0:9:2.67:8,3,0	0/1:2,0:2:0:0,0,0	0/0:9,0:4:6.52:0,7,87	0/0:12,0:7:5.46:0,5,45	1/1:20,0:20:1.33:10,1,0	1/1:16,0:16:7.31:28,7,0	0/0:18,0:18:7.60:0,8,95	0/1:14,0:14:21.01:21,0,377	0/0:28,0:28:8.67:0,9,95	0/0:22,0:22:14.28:0,14,530	0/0:13,0:13:3.72:0,4,50	0/0:23,0:23:0.10:0,0,1	0/0:13,0:12:4.51:0,5,72	0/1:22,0:21:1.79:2,0,60	0/0:29,0:29:1.59:0,2,5	0/1:41,0:41:21.08:23,0,21	0/0:4,0:4:3.86:0,4,23	0/0:4,0:4:11.56:0,12,96	0/0:13,0:12:16.32:0,16,182	0/1:16,0:16:0.47:0,0,3	1/1:19,0:18:8.17:23,8,0	0/1:25,0:25:0.52:1,0,2	0/0:8,0:8:1.58:0,2,5	0/0:4,0:4:2.22:0,2,7	0/1:29,0:29:0.74:2,0,1	0/1:9,2:11:26.28:26,0,190	0/1:10,2:12:43.87:44,0,85	0/1:10,0:10:4.44:4,0,226
chr10	6034075	.	G	GTA	217.04	PASS	AB=0.905;AC=13;AF=0.232;AN=56;BaseQRankSum=3.734;DP=616;FS=0.635;HRun=0;HaplotypeScore=407.3019;InbreedingCoeff=0.1423;MQ=51.39;MQ0=3;MQRankSum=0.403;QD=1.27;ReadPosRankSum=-1.535;VQSLOD=0.2887;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:12,1:13:6.63:7,0,44	0/0:5,0:5:2.99:0,3,36	0/0:15,0:6:0.32:0,0,103	0/0:24,0:14:10.65:0,11,92	1/1:26,0:26:1.87:11,2,0	0/1:18,0:18:1.83:2,0,118	0/0:27,0:27:14.28:0,14,121	0/0:28,0:28:40.39:0,40,516	0/0:38,0:38:65.28:0,65,435	0/0:31,0:31:34.68:0,35,618	0/0:18,0:18:8.44:0,8,71	0/0:27,0:27:32.65:0,33,148	0/0:16,0:15:22.26:0,22,136	0/0:25,0:24:17.14:0,17,106	0/0:33,0:33:27.92:0,28,107	0/0:47,0:47:32.44:0,32,209	0/1:5,2:7:33.73:98,0,34	0/1:3,3:6:31.70:144,0,32	0/0:17,0:15:26.33:0,26,243	0/0:21,0:21:1.01:0,1,7	1/1:13,10:22:8.15:23,8,0	0/1:35,0:34:0.74:1,0,45	0/0:14,0:14:1.77:0,2,5	1/1:6,1:7:1.27:30,1,0	0/0:35,0:35:36.47:0,36,297	0/1:23,1:24:25.09:25,0,275	0/0:24,0:24:27.24:0,27,192	0/1:12,0:12:10.48:10,0,196
chr10	6034077	.	G	GTTA	566.22	PASS	AB=0.982;AC=21;AF=0.375;AN=56;BaseQRankSum=9.532;DP=645;FS=14.046;HRun=0;HaplotypeScore=429.0745;InbreedingCoeff=-0.0636;MQ=50.62;MQ0=4;MQRankSum=-2.189;QD=1.44;ReadPosRankSum=-1.085;VQSLOD=0.1765;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:6.76:0,7,112	0/1:5,1:6:9.21:9,0,52	0/0:16,0:6:20.28:0,20,199	0/0:24,0:14:9.08:0,9,107	1/1:27,0:27:4.43:14,4,0	0/1:18,0:18:35.95:36,0,261	0/0:28,0:28:16.12:0,16,250	0/0:33,0:33:39.93:0,40,871	0/0:38,0:38:45.49:0,45,847	0/1:31,1:32:39.76:40,0,721	0/1:19,0:19:1.71:2,0,108	0/1:30,0:30:57.08:57,0,161	0/1:15,1:15:10.44:10,0,188	0/1:25,0:24:29.07:29,0,110	0/1:38,0:38:59.77:105,0,60	0/1:47,0:47:99:142,0,282	0/1:7,0:7:38.77:39,0,68	0/1:6,0:6:57.83:73,0,58	0/0:20,0:17:18.64:0,19,466	1/1:24,0:24:11.20:53,11,0	1/1:22,2:23:19.33:91,19,0	0/1:36,0:35:23.01:23,0,93	1/1:13,1:14:0.30:1,0,0	0/0:7,0:7:3.94:0,4,26	0/0:36,0:36:20.17:0,20,489	0/0:24,0:24:31.90:0,32,578	0/1:24,0:24:6.47:6,0,154	0/0:12,0:12:29.10:0,29,443
chr10	6034082	.	TGC	T	3075.55	PASS	AB=0.783;AC=28;AF=0.500;AN=56;BaseQRankSum=8.444;DP=679;FS=37.631;HRun=0;HaplotypeScore=407.6681;InbreedingCoeff=-0.6742;MQ=50.71;MQ0=4;MQRankSum=-1.808;QD=4.74;ReadPosRankSum=-0.306;VQSLOD=1.3076;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:10,3:13:6.11:0,6,64	0/1:7,0:7:18.15:55,0,18	0/1:21,1:8:2.01:2,0,172	0/1:26,0:14:1.98:2,0,61	0/1:14,13:27:1.48:3,0,1	0/1:12,6:18:99:131,0,176	0/1:19,10:29:38.14:38,0,85	0/1:34,4:38:9.68:10,0,599	0/1:25,13:38:99:138,0,487	0/1:26,10:36:99:297,0,360	0/1:12,8:20:37.63:38,0,52	0/1:21,12:33:94.53:244,0,95	0/1:10,7:16:94.62:100,0,95	0/1:14,12:25:9.14:201,0,9	0/1:20,20:39:7.96:315,0,8	0/1:25,22:47:99:401,0,176	0/1:7,0:7:17.22:17,0,51	0/1:6,0:6:22.97:30,0,23	0/1:16,5:18:99:136,0,181	0/1:15,9:24:5.83:29,0,6	1/1:22,2:23:1.99:9,2,0	0/1:25,14:38:28.65:29,0,76	0/0:9,8:17:1.39:0,1,6	1/1:6,1:7:0.75:10,1,0	0/1:27,9:36:99:119,0,284	0/1:14,11:25:99:286,0,213	0/1:8,15:23:25.47:388,0,25	0/1:7,6:13:99:190,0,143
chr10	6034101	.	G	GCA	5485.80	PASS	AB=0.823;AC=20;AF=0.357;AN=56;BaseQRankSum=7.885;DP=878;FS=27.047;HRun=0;HaplotypeScore=522.3168;InbreedingCoeff=-0.6100;MQ=45.50;MQ0=7;MQRankSum=-2.436;QD=8.45;ReadPosRankSum=2.279;VQSLOD=3.8521;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:17,0:16:23.85:24,0,273	0/1:11,0:11:40.86:41,0,194	0/0:34,0:11:1.79:0,2,152	0/0:40,0:19:8.70:0,9,268	0/1:27,12:38:99:408,0,229	0/1:18,4:22:99:232,0,304	0/1:28,6:36:99:154,0,780	0/0:52,0:51:99:0,115,1772	0/1:36,7:43:99:211,0,980	0/1:42,13:56:99:533,0,1240	0/1:17,6:23:99:190,0,540	0/1:22,14:36:99:557,0,452	0/1:13,8:20:99:285,0,380	0/1:22,7:29:99:181,0,541	0/1:27,18:44:99:766,0,443	0/1:37,15:53:99:688,0,519	0/1:8,0:9:19.25:19,0,187	0/1:5,0:8:20.34:20,0,180	0/0:26,0:22:0.71:0,1,439	0/1:34,6:42:99:280,0,918	0/0:28,0:28:6.42:0,6,217	0/1:45,7:51:99:269,0,1115	0/1:18,5:24:99:218,0,306	0/0:6,1:8:6.01:0,6,82	0/1:38,8:48:99:402,0,966	0/1:31,0:32:8.46:8,0,879	0/0:28,0:28:31.24:0,31,475	0/0:13,0:13:24.44:0,24,411
chr10	6034124	.	TGAGTG	T	5447.16	PASS	AB=0.836;AC=20;AF=0.357;AN=56;BaseQRankSum=11.532;DP=843;FS=25.728;HRun=0;HaplotypeScore=522.5387;InbreedingCoeff=-0.5770;MQ=43.95;MQ0=11;MQRankSum=-2.239;QD=8.39;ReadPosRankSum=-4.990;VQSLOD=0.7484;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:18:6.31:0,6,292	0/1:10,2:12:38.69:39,0,412	0/0:26,0:9:20.69:0,21,305	0/0:35,0:14:18.09:0,18,312	0/1:26,9:37:99:235,0,421	0/1:17,4:21:99:263,0,381	0/1:30,2:32:45.56:46,0,732	0/0:48,0:48:99:0,120,2478	0/1:30,5:35:99:297,0,602	0/1:38,12:52:99:665,0,2227	0/1:22,9:31:99:264,0,734	0/1:21,7:32:99:368,0,221	0/1:14,5:21:99:367,0,183	0/1:21,0:24:99:133,0,495	0/1:29,9:39:99:541,0,271	0/1:37,7:45:99:541,0,543	0/0:13,0:13:14.53:0,15,553	0/1:8,0:8:4.92:5,0,228	0/0:15,0:12:21.07:0,21,492	0/1:37,6:43:99:182,0,1647	0/0:28,0:25:11.45:0,11,462	0/1:49,5:55:99:171,0,1685	0/1:21,6:28:99:197,0,351	0/0:7,1:8:1.53:0,2,71	0/1:39,9:48:99:350,0,1718	0/1:37,5:42:99:239,0,1372	0/1:14,9:24:99:518,0,200	0/1:13,1:14:28.43:28,0,487
chr10	6034132	.	TGTG	T	713.88	PASS	AB=0.978;AC=16;AF=0.286;AN=56;BaseQRankSum=3.562;DP=763;FS=5.382;HRun=0;HaplotypeScore=490.2961;InbreedingCoeff=-0.2308;MQ=47.02;MQ0=9;MQRankSum=-2.457;QD=1.63;ReadPosRankSum=-6.883;VQSLOD=-0.6538;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:12,0:12:13.70:65,0,14	0/0:12,0:12:19.03:0,19,237	0/0:23,0:9:19.02:0,19,250	0/1:35,0:16:5.51:6,0,175	0/1:32,1:32:33.07:33,0,64	0/1:20,1:21:16.01:16,0,152	1/1:27,2:28:8.93:131,9,0	0/0:34,0:34:92.65:0,93,1189	0/1:31,0:31:49.16:49,0,234	0/0:47,0:47:17.86:0,18,939	0/1:32,1:33:70.96:101,0,71	0/1:26,0:26:55.77:56,0,176	0/1:17,0:17:16.24:16,0,71	0/1:17,0:16:85.69:86,0,172	0/0:36,0:35:10.17:0,10,110	0/0:45,0:45:5.05:0,5,318	0/1:12,0:12:46.29:46,0,160	0/0:6,0:6:11.22:0,11,116	0/0:14,0:11:14.99:0,15,197	0/1:45,0:45:6.20:6,0,524	0/0:25,0:22:8.11:0,8,131	0/1:54,1:55:50.01:50,0,365	0/1:26,1:27:49.64:140,0,50	0/0:8,0:8:0.43:0,0,1	0/1:43,1:44:67.70:68,0,414	0/0:40,1:40:48.36:0,48,756	0/0:23,0:23:12.58:0,13,145	0/0:10,0:10:15.01:0,15,198
chr10	6034134	.	TGGTGAGTC	T	2289.36	PASS	AB=0.958;AC=26;AF=0.464;AN=56;BaseQRankSum=1.170;DP=738;FS=3.447;HRun=0;HaplotypeScore=493.0222;InbreedingCoeff=-0.4392;MQ=47.49;MQ0=8;MQRankSum=-0.702;QD=3.54;ReadPosRankSum=-6.451;VQSLOD=-0.5955;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:9,1:12:84:124,0,84	0/1:11,1:12:20.20:20,0,300	0/0:23,0:9:18.22:0,18,380	0/0:32,0:15:12.91:0,13,266	0/1:33,0:32:54.29:54,0,129	0/1:20,1:21:99:151,0,297	0/1:24,2:27:82.63:83,0,105	0/1:34,0:34:37.05:37,0,1220	0/1:29,0:30:87.72:88,0,491	0/1:45,0:45:99:138,0,1100	0/1:31,0:31:99:184,0,105	0/1:25,0:25:36.17:36,0,179	0/1:15,0:15:3.04:53,0,3	0/1:17,0:16:59.55:146,0,60	0/1:37,0:36:31.38:31,0,153	0/1:42,1:44:26.08:26,0,608	0/1:11,0:11:65.83:66,0,107	0/0:4,0:4:9.03:0,9,184	0/1:13,0:10:9.78:10,0,155	0/1:42,1:44:99:188,0,867	1/1:21,0:19:26.49:128,26,0	0/1:50,1:53:18.97:19,0,806	1/1:26,0:26:16:283,16,0	1/1:8,0:8:5.58:27,6,0	0/1:41,2:44:99:197,0,949	0/1:35,5:39:99:368,0,1092	0/0:22,0:23:16.51:0,17,265	0/0:10,0:10:10.45:0,10,345
chr10	6034136	.	G	GTGTTA	2967.87	PASS	AB=0.977;AC=28;AF=0.500;AN=56;BaseQRankSum=8.582;DP=732;FS=24.040;HRun=0;HaplotypeScore=502.2786;InbreedingCoeff=-0.6051;MQ=47.73;MQ0=8;MQRankSum=-1.919;QD=4.48;ReadPosRankSum=-5.182;VQSLOD=-0.4915;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:12,1:12:21.34:21,0,117	0/1:12,0:12:32.20:32,0,149	0/0:22,0:9:15.02:0,15,237	0/1:33,0:16:20.41:20,0,181	0/1:35,0:34:40.59:41,0,62	0/1:20,0:20:32.89:33,0,165	0/1:29,0:28:19.21:177,0,19	0/0:34,0:34:61.81:0,62,1457	0/1:30,1:31:99:267,0,241	0/1:45,1:46:99:475,0,727	1/1:30,0:30:10.77:94,11,0	0/1:22,0:22:86.05:103,0,86	1/1:13,0:13:15.87:125,16,0	0/1:19,0:18:44.67:45,0,141	0/1:32,0:32:45.44:70,0,45	0/1:38,2:40:99:139,0,168	0/1:11,0:11:9:9,0,161	0/1:3,1:4:92.09:128,0,92	0/0:13,0:10:9.02:0,9,146	0/1:43,1:44:99:101,0,543	0/1:24,0:21:99:103,0,140	0/1:52,0:52:45.40:45,0,354	0/1:25,1:26:62.46:99,0,62	1/1:8,0:8:1.13:4,1,0	0/1:44,1:45:99:134,0,445	0/1:39,2:40:99:640,0,687	0/1:23,0:23:53.41:173,0,53	0/1:10,0:10:50.07:50,0,224
chr10	6034137	.	TGA	T	342.68	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=6.657;DP=731;FS=15.783;HRun=0;HaplotypeScore=462.6589;InbreedingCoeff=-0.0037;MQ=47.93;MQ0=6;MQRankSum=-2.874;QD=1.20;ReadPosRankSum=-4.188;VQSLOD=0.0360;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:8,5:12:8.34:68,8,0	0/0:12,0:12:18.56:0,19,174	0/0:21,0:9:15.61:0,16,190	0/0:33,0:16:18.41:0,18,210	0/1:35,0:34:21.39:21,0,88	0/1:21,0:21:28.68:29,0,165	0/0:29,0:28:12.34:0,12,203	0/0:35,0:35:90.18:0,90,1520	0/0:31,0:31:6.35:0,6,312	0/0:46,0:46:35.81:0,36,735	0/1:30,0:30:64.22:64,0,64	0/1:22,0:22:48.78:63,0,49	1/1:13,0:13:6.33:29,6,0	0/1:19,0:18:56.59:74,0,57	0/0:32,0:32:16.86:0,17,207	0/0:40,0:40:20.71:0,21,384	0/1:11,0:11:29.61:30,0,90	0/0:4,0:4:11.65:0,12,114	0/0:11,0:9:8.99:0,9,133	0/0:45,0:45:23.96:0,24,828	0/1:24,0:21:18.02:18,0,73	0/0:51,0:51:36.22:0,36,733	0/1:26,0:26:64.30:69,0,64	0/1:8,0:8:0.16:0,0,0	0/0:45,0:45:10.94:0,11,717	0/1:41,0:41:26.68:27,0,881	0/1:23,0:23:6.45:6,0,129	0/0:10,0:10:14.54:0,15,239
chr10	6034139	.	A	AGT	2204.64	PASS	AB=0.835;AC=22;AF=0.393;AN=56;BaseQRankSum=0.591;DP=727;FS=9.285;HRun=0;HaplotypeScore=468.8250;InbreedingCoeff=0.0921;MQ=48.00;MQ0=4;MQRankSum=-2.010;QD=5.96;ReadPosRankSum=-1.514;VQSLOD=1.3471;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:13:15.44:196,15,0	0/1:8,7:15:26.81:182,0,27	0/1:19,0:9:6.38:6,0,78	0/0:33,0:16:22.53:0,23,181	0/1:23,14:36:43.55:124,0,44	0/1:22,0:22:3.38:3,0,95	0/0:27,0:27:7.37:0,7,105	0/0:35,0:35:40.14:0,40,428	0/1:32,0:32:19.81:20,0,177	0/1:30,11:41:99:594,0,126	0/1:19,10:29:77.15:202,0,77	0/1:17,6:24:9.81:168,0,10	1/1:11,3:14:1.47:8,1,0	1/1:14,5:18:17.83:190,18,0	0/1:31,0:31:2.30:2,0,88	0/0:39,0:39:34.89:0,35,275	1/1:2,7:9:3.06:243,3,0	0/1:3,1:4:6.80:62,0,7	0/0:8,0:7:5.46:0,5,49	0/0:45,0:45:47.90:0,48,389	1/1:17,6:20:1.82:13,2,0	0/0:52,0:52:19.60:0,20,329	0/1:16,11:29:19.57:353,0,20	0/1:6,2:8:0:0,0,0	0/0:43,0:43:50.43:0,50,430	0/0:41,0:41:37.74:0,38,402	0/0:23,0:23:12.47:0,12,77	0/0:10,0:10:13.21:0,13,99
chr10	6034287	.	G	GT	5626.03	PASS	AB=0.962;AC=25;AF=0.446;AN=56;BaseQRankSum=10.280;DP=546;FS=8.640;HRun=1;HaplotypeScore=268.0352;InbreedingCoeff=0.9416;MQ=49.45;MQ0=8;MQRankSum=-7.039;QD=27.71;ReadPosRankSum=-0.483;VQSLOD=2.9322;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:22.51:0,23,308	1/1:3,4:7:17.92:266,18,0	0/1:24,0:8:1.79:2,0,75	0/0:26,0:13:30.57:0,31,294	1/1:2,14:16:41.23:437,41,0	0/0:26,0:26:51.17:0,51,661	0/0:27,0:27:33.03:0,33,409	0/0:38,0:33:87.21:0,87,1076	0/0:23,0:23:45.15:0,45,583	1/1:6,11:17:45.10:630,45,0	1/1:4,10:14:42.08:522,42,0	1/1:3,12:15:45.11:621,45,0	1/1:3,17:19:54.18:804,54,0	1/1:8,18:26:72.15:929,72,0	0/0:23,0:23:36.12:0,36,467	0/0:23,0:23:51.14:0,51,643	1/1:0,9:9:20.98:281,21,0	1/1:0,3:3:9.03:134,9,0	0/0:21,0:16:33.07:0,33,399	0/0:20,0:20:45.13:0,45,567	1/1:6,15:21:18.73:338,19,0	0/0:30,0:30:65.79:0,66,812	1/1:3,7:10:23.95:306,24,0	1/1:3,17:20:32.61:355,33,0	0/0:14,0:14:21.07:0,21,272	0/0:27,0:27:35.58:0,36,762	0/0:13,0:13:24.04:0,24,292	0/0:8,0:8:15.05:0,15,192
chr10	6034291	.	AGCG	A	1756.24	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=12.279;DP=493;FS=3.640;HRun=0;HaplotypeScore=266.2932;InbreedingCoeff=0.9719;MQ=47.58;MQ0=8;MQRankSum=-6.254;QD=11.63;ReadPosRankSum=1.467;VQSLOD=3.1615;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:27.09:0,27,442	1/1:6,0:6:17.57:113,18,0	0/0:23,0:7:11.94:0,12,121	0/0:22,0:12:21.36:0,21,394	1/1:14,0:14:24.44:141,24,0	0/0:25,0:25:54.09:0,54,906	0/0:28,0:28:33.04:0,33,474	0/0:36,0:31:84.18:0,84,1218	0/0:23,0:23:45.12:0,45,734	1/1:11,1:12:23.54:226,24,0	1/1:11,0:11:26.38:123,26,0	1/1:13,1:14:29.65:158,30,0	1/1:17,0:16:46.38:256,46,0	1/1:19,0:19:52.20:279,52,0	0/0:19,0:19:36.12:0,36,610	0/0:21,0:21:42.14:0,42,737	1/1:9,0:9:21.29:142,21,0	1/1:3,0:3:8.99:77,9,0	0/0:18,0:13:27.09:0,27,418	0/0:18,0:18:39.13:0,39,673	1/1:18,0:18:29.68:175,30,0	0/0:29,0:29:62.56:0,63,1024	1/1:8,0:8:14.18:91,14,0	1/1:18,2:20:29.58:203,30,0	0/0:12,0:12:21.04:0,21,335	0/0:23,0:23:41.86:0,42,947	0/0:11,0:11:21.07:0,21,373	0/0:6,0:6:9.03:0,9,153
chr10	6034294	.	G	GTTA	5934.24	PASS	AB=0.958;AC=25;AF=0.446;AN=56;BaseQRankSum=8.998;DP=530;FS=11.839;HRun=0;HaplotypeScore=286.5954;InbreedingCoeff=0.9172;MQ=46.49;MQ0=9;MQRankSum=-6.339;QD=28.12;ReadPosRankSum=-1.445;VQSLOD=3.3348;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:27.08:0,27,433	1/1:5,1:6:18.06:244,18,0	0/0:22,0:7:8.53:0,9,101	0/0:28,0:12:31.04:0,31,408	1/1:16,0:16:34.72:385,35,0	0/0:25,0:25:51.17:0,51,851	0/0:27,0:27:33.10:0,33,520	0/0:37,0:32:81.24:0,81,1324	0/0:23,0:23:42.14:0,42,714	1/1:14,0:14:38.49:599,38,0	1/1:13,1:14:35.29:532,35,0	1/1:16,1:17:47.59:650,48,0	1/1:18,0:17:51.17:767,51,0	1/1:23,1:24:65.54:1001,66,0	0/0:21,0:21:36.12:0,36,599	0/0:20,0:20:38.18:0,38,631	1/1:10,0:10:21.05:303,21,0	1/1:5,0:5:15.05:267,15,0	0/0:18,0:13:27.08:0,27,430	0/0:18,0:18:36.12:0,36,614	1/1:26,0:26:28.84:269,29,0	0/0:29,0:29:63.18:0,63,1016	1/1:8,1:9:23.74:270,24,0	1/1:28,1:29:46.03:641,46,0	0/0:11,0:11:18.06:0,18,307	0/1:22,1:23:6.70:7,0,894	0/0:11,0:11:21.07:0,21,358	0/0:6,0:6:9.03:0,9,154
chr10	6034322	.	TGC	T	6164.64	PASS	AB=0.875;AC=27;AF=0.482;AN=56;BaseQRankSum=-4.973;DP=500;FS=4.230;HRun=0;HaplotypeScore=272.0182;InbreedingCoeff=0.8507;MQ=43.80;MQ0=4;MQRankSum=-1.532;QD=27.77;ReadPosRankSum=-2.063;VQSLOD=4.2242;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:32.96:0,33,309	0/1:6,1:7:27.78:28,0,86	0/0:22,0:8:6.17:0,6,146	0/0:24,0:10:5.86:0,6,73	0/0:15,0:15:14.87:0,15,121	1/1:2,17:19:36.12:508,36,0	1/1:3,14:17:38.94:453,39,0	1/1:9,33:34:87.25:1214,87,0	1/1:3,13:16:36.12:493,36,0	0/0:20,0:20:15.40:0,15,282	0/0:14,0:14:29.87:0,30,287	0/0:19,0:19:20.14:0,20,386	0/0:20,0:20:26.05:0,26,406	0/0:31,0:31:14.04:0,14,477	1/1:4,17:21:45.13:564,45,0	1/1:3,18:21:40.94:525,41,0	0/0:11,0:11:18.03:0,18,185	0/0:10,0:10:19.96:0,20,165	1/1:2,6:8:15.05:208,15,0	1/1:2,9:12:30:359,30,0	0/0:24,0:24:26.44:0,26,178	1/1:4,17:21:48.14:623,48,0	0/0:11,0:11:8.90:0,9,70	0/0:36,0:36:29.06:0,29,289	1/1:3,5:8:12.04:169,12,0	1/1:3,16:19:21.38:650,21,0	1/1:1,8:9:24.08:327,24,0	1/1:1,1:2:3.01:43,3,0
chr10	6034342	.	TGC	T	7571.42	PASS	AB=0.992;AC=30;AF=0.536;AN=56;BaseQRankSum=-5.171;DP=572;FS=0.850;HRun=0;HaplotypeScore=268.7633;InbreedingCoeff=0.6824;MQ=49.04;MQ0=2;MQRankSum=-0.108;QD=21.15;ReadPosRankSum=-5.146;VQSLOD=3.4122;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:11.08:0,11,320	0/0:7,0:7:17.97:0,18,162	0/1:29,0:19:99:99,0,151	0/1:33,0:17:52.47:52,0,137	0/0:18,0:18:23.93:0,24,239	1/1:7,17:24:38.90:585,39,0	1/1:1,19:20:39.13:556,39,0	1/1:4,44:45:99:1668,123,0	1/1:1,12:13:36.12:535,36,0	0/0:25,0:25:7.71:0,8,402	0/1:15,0:15:10.86:11,0,306	0/0:23,0:23:11.98:0,12,374	0/0:22,0:22:48.73:0,49,459	0/0:29,0:29:36:0,36,613	1/1:5,21:26:47.99:648,48,0	1/1:7,18:23:42.07:564,42,0	0/0:16,0:16:32.88:0,33,289	0/0:11,0:11:5.86:0,6,204	1/1:3,6:9:18.06:269,18,0	1/1:2,10:12:33:388,33,0	0/0:22,0:22:5.81:0,6,215	1/1:1,18:18:48.15:655,48,0	0/0:11,0:11:12.50:0,13,131	0/1:44,0:43:0.75:1,0,322	1/1:0,5:5:12.04:180,12,0	1/1:6,17:23:35.61:877,36,0	1/1:0,8:8:24.08:354,24,0	1/1:3,1:4:9.03:131,9,0
chr10	6034367	.	AAG	A	89.56	PASS	AB=0.954;AC=6;AF=0.120;AN=50;BaseQRankSum=0.629;DP=597;FS=2.643;HRun=0;HaplotypeScore=228.9827;InbreedingCoeff=0.0639;MQ=44.67;MQ0=16;MQRankSum=-1.598;QD=0.61;ReadPosRankSum=0.592;VQSLOD=2.4789;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:25,8:32:2.97:33,3,0	0/0:7,0:7:9.02:0,9,109	./.	./.	0/0:16,0:16:2.63:0,3,41	0/0:20,0:20:5.49:0,5,52	0/0:21,0:21:10.24:0,10,95	0/0:34,0:33:3.83:0,4,20	0/0:19,0:19:3.43:0,3,20	0/0:27,0:26:23.98:0,24,304	0/0:13,0:14:2.79:0,3,43	0/1:24,1:25:35.32:35,0,108	0/1:20,2:21:60.43:60,0,267	0/0:41,1:41:0.18:0,0,381	0/0:26,0:28:12.61:0,13,136	0/0:29,0:29:20.64:0,21,157	0/1:24,1:24:34.85:35,0,526	0/0:11,0:11:9.03:0,9,131	0/0:13,0:11:8.99:0,9,99	0/0:9,0:9:0:0,0,0	0/0:23,0:21:15.05:0,15,198	./.	0/0:13,0:13:0:0,0,0	0/1:40,1:41:35.65:36,0,307	0/0:10,0:10:0:0,0,0	0/0:19,0:18:18.05:0,18,232	0/0:13,0:13:3.90:0,4,47	0/0:7,0:6:6.47:0,6,69
chr10	6034481	.	TC	T	13887.63	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=6.948;DP=785;FS=0.265;HRun=1;HaplotypeScore=91.2742;InbreedingCoeff=0.9994;MQ=84.97;MQ0=0;MQRankSum=-6.665;QD=38.05;ReadPosRankSum=-0.303;VQSLOD=4.8841;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:90.31:0,90,1438	0/0:10,0:10:24.08:0,24,383	0/0:31,0:31:90.30:0,90,1423	0/0:31,0:30:87.21:0,87,1275	0/0:31,0:31:81.28:0,81,1293	1/1:0,30:30:72.24:1006,72,0	1/1:0,29:29:75.25:1048,75,0	1/1:0,42:41:99:1697,123,0	1/1:0,29:29:75.25:1048,75,0	0/0:38,0:38:99:0,114,1741	0/0:29,0:29:84.27:0,84,1316	0/0:29,0:29:81.28:0,81,1289	0/0:35,0:35:99:0,99,1554	0/0:29,0:29:78.27:0,78,1244	1/1:0,32:32:87.29:1215,87,0	1/1:0,23:23:66.22:922,66,0	0/0:29,0:29:87.28:0,87,1367	0/0:26,0:26:72.24:0,72,1141	1/1:0,23:23:63.21:880,63,0	1/1:0,37:37:99:1383,99,0	0/0:18,0:18:54.18:0,54,863	1/1:0,17:17:51.17:713,51,0	0/0:22,0:22:63.21:0,63,1006	0/0:30,0:30:87.30:0,87,1389	1/1:0,26:26:72.24:1005,72,0	1/1:1,43:44:84.45:1755,84,0	1/1:0,21:21:63.21:881,63,0	1/1:0,12:12:24.08:336,24,0
chr10	6035253	.	T	TGGCTA	23691.93	PASS	AB=0.622;AC=25;AF=0.446;AN=56;BaseQRankSum=-14.318;DP=737;FS=12.764;HRun=0;HaplotypeScore=126.6452;InbreedingCoeff=0.9274;MQ=77.51;MQ0=0;MQRankSum=-12.492;QD=69.89;ReadPosRankSum=0.020;VQSLOD=5.5741;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,138,2755	0/0:11,0:11:33.11:0,33,693	0/0:22,0:22:54.05:0,54,1039	0/0:14,0:14:36.11:0,36,726	0/0:22,0:22:63.19:0,63,1216	1/1:5,19:24:63.22:1897,63,0	1/1:6,17:24:42.14:1245,42,0	1/1:12,19:32:78.27:2316,78,0	1/1:4,20:24:66.23:1942,66,0	0/0:17,0:17:51.17:0,51,1037	0/0:23,0:23:54.18:0,54,1095	0/0:28,0:28:78.27:0,78,1595	0/0:29,0:29:84.29:0,84,1746	0/0:25,0:25:72.23:0,72,1434	1/1:3,33:36:93.32:2824,93,0	1/1:6,29:35:93.32:2726,93,0	0/0:21,0:21:54.19:0,54,1113	0/0:20,0:19:57.19:0,57,1116	1/1:4,15:20:51.18:1533,51,0	1/1:7,18:28:39.13:1207,39,0	0/0:56,0:56:99:0,154,3105	1/1:1,16:17:45.15:1346,45,0	0/0:25,0:25:72.25:0,72,1468	0/0:34,0:34:93.32:0,93,1952	1/1:5,13:18:39.13:1062,39,0	0/1:11,17:28:56.75:1819,0,57	1/1:11,28:39:99:3032,99,0	1/1:0,11:11:24.08:744,24,0
chr10	6035803	.	CACACACACATAT	C	4700.01	PASS	AB=0.992;AC=15;AF=0.268;AN=56;BaseQRankSum=-2.521;DP=665;FS=13.244;HRun=0;HaplotypeScore=208.8850;InbreedingCoeff=0.4461;MQ=56.03;MQ0=25;MQRankSum=3.270;QD=18.95;ReadPosRankSum=-0.183;VQSLOD=2.3752;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:28:12.04:0,12,280	0/0:14,0:13:12:0,12,306	0/0:7,0:1:3.01:0,3,67	0/0:12,0:6:12.76:0,13,153	0/0:20,0:20:15.03:0,15,380	0/1:27,0:27:23.28:23,0,164	0/1:22,0:22:7.84:8,0,69	1/1:26,0:26:61.47:819,61,0	1/1:20,1:20:24.08:550,24,0	0/0:32,0:29:36:0,36,762	0/0:23,0:21:13.86:0,14,305	0/0:22,0:21:6.46:0,6,230	0/0:20,0:19:4.23:0,4,122	0/0:23,0:22:15.52:0,16,341	0/0:35,0:35:2.03:0,2,198	0/1:28,0:27:26.62:27,0,221	0/0:28,0:26:28.64:0,29,600	0/0:17,0:17:12.04:0,12,372	0/1:23,0:21:99:429,0,119	0/0:21,0:21:14.99:0,15,163	0/0:39,0:36:14.99:0,15,209	0/0:30,0:28:31.53:0,32,291	0/0:21,0:21:15.65:0,16,348	0/0:23,0:23:26.92:0,27,585	0/1:28,0:28:10.88:11,0,177	1/1:1,30:31:90.17:1670,90,0	1/1:4,18:22:15.23:485,15,0	1/1:16,3:16:23.48:677,23,0
chr10	6035805	.	CACACACATAT	C	5383.99	PASS	AB=0.981;AC=21;AF=0.375;AN=56;BaseQRankSum=-0.432;DP=656;FS=31.107;HRun=0;HaplotypeScore=190.5312;InbreedingCoeff=0.3678;MQ=56.78;MQ0=25;MQRankSum=1.506;QD=15.61;ReadPosRankSum=-0.228;VQSLOD=2.1149;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:28:12.02:0,12,171	0/0:14,0:13:12:0,12,202	0/0:7,0:1:3.01:0,3,67	0/0:12,0:6:12.34:0,12,152	0/0:20,0:20:13.77:0,14,245	0/1:26,1:27:27.79:83,0,28	1/1:22,1:22:1.50:52,2,0	1/1:25,0:25:64.62:954,65,0	1/1:4,16:19:24.08:785,24,0	0/0:32,0:29:25.19:0,25,400	0/0:23,0:21:13.84:0,14,203	0/1:19,0:19:21.59:22,0,145	0/1:18,0:18:23.89:24,0,66	0/0:24,0:23:15.11:0,15,211	0/1:35,0:35:18.72:81,0,19	0/1:27,0:26:44.41:156,0,44	0/0:27,0:25:19.30:0,19,352	0/0:18,0:18:12.04:0,12,268	1/1:23,0:21:24.68:551,25,0	0/0:21,0:21:7.14:0,7,43	0/0:39,0:36:8.97:0,9,94	0/1:30,0:28:13.23:13,0,20	0/0:20,0:20:13.01:0,13,244	0/0:23,0:24:24.46:0,24,339	0/1:27,0:27:20.32:103,0,20	1/1:31,0:31:87.19:1484,87,0	1/1:18,2:20:14.93:446,15,0	1/1:18,0:15:42.10:628,42,0
chr10	6035807	.	CACACAT	C	6513	PASS	AB=0.967;AC=48;AF=0.857;AN=56;BaseQRankSum=3.234;DP=648;FS=26.443;HRun=0;HaplotypeScore=161.5654;InbreedingCoeff=0.2093;MQ=57.42;MQ0=23;MQRankSum=-0.323;QD=10.35;ReadPosRankSum=1.780;VQSLOD=2.5697;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:28:12.33:33,0,12	1/1:14,0:13:11.25:55,11,0	0/0:7,0:1:3.01:0,3,35	0/0:12,0:6:5.60:0,6,64	0/1:20,2:22:34.41:139,0,34	1/1:25,0:26:14.80:248,15,0	1/1:22,1:22:11.97:173,12,0	1/1:24,0:24:61.98:485,62,0	1/1:19,0:18:24.08:329,24,0	1/1:31,0:29:68.38:517,68,0	1/1:23,0:21:7.42:40,7,0	1/1:21,0:20:9.37:111,9,0	1/1:19,0:18:5.15:78,5,0	1/1:23,1:23:14.29:139,14,0	1/1:35,0:37:30.02:487,30,0	1/1:24,0:26:9.12:446,9,0	1/1:25,1:24:19.89:202,20,0	0/1:19,0:19:31.30:31,0,38	1/1:22,0:20:50.93:543,51,0	1/1:19,0:19:6.02:87,6,0	1/1:37,0:34:2.87:15,3,0	1/1:30,0:28:30.10:530,30,0	0/1:19,1:20:74.63:75,0,81	1/1:21,3:24:25.40:186,25,0	1/1:22,0:24:20.99:291,21,0	1/1:31,0:31:80.80:728,81,0	1/1:20,0:20:15.50:210,15,0	1/1:17,0:15:41.81:336,42,0
chr10	6035809	.	CACAT	C	6680.03	PASS	AB=0.552;AC=50;AF=0.893;AN=56;BaseQRankSum=2.434;DP=639;FS=27.482;HRun=0;HaplotypeScore=150.3187;InbreedingCoeff=0.3653;MQ=57.77;MQ0=21;MQRankSum=-0.753;QD=10.79;ReadPosRankSum=0.927;VQSLOD=2.8479;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:6,24:29:8.89:134,9,0	1/1:1,13:13:12.04:232,12,0	0/0:7,0:1:3.01:0,3,35	0/0:13,0:7:8.54:0,9,82	0/1:5,17:22:5.95:152,0,6	1/1:3,0:27:14.61:144,15,0	1/1:4,0:23:9.01:96,9,0	1/1:24,0:24:61.98:485,62,0	1/1:19,0:18:23.95:218,24,0	1/1:4,27:29:73.99:692,74,0	1/1:5,16:19:11.98:167,12,0	1/1:4,17:20:11.59:195,12,0	1/1:2,16:17:5.45:98,5,0	1/1:2,22:23:14.86:274,15,0	1/1:3,0:36:30:294,30,0	1/1:4,0:25:27.05:274,27,0	1/1:6,20:24:23.12:431,23,0	1/1:1,18:19:3.30:168,3,0	1/1:5,0:19:50.91:452,51,0	1/1:1,0:18:5.93:48,6,0	1/1:6,30:33:3.01:59,3,0	1/1:5,0:27:30.07:317,30,0	0/1:3,17:20:47.47:85,0,47	1/1:5,18:23:23.74:385,24,0	1/1:2,0:23:17.95:172,18,0	1/1:31,0:31:80.78:658,81,0	1/1:20,0:20:15.49:140,15,0	1/1:17,0:15:41.31:309,41,0
chr10	6035811	.	CATAT	C	7217.77	PASS	AB=1.000;AC=49;AF=0.875;AN=56;BaseQRankSum=0.754;DP=629;FS=19.611;HRun=0;HaplotypeScore=145.4811;InbreedingCoeff=0.2786;MQ=57.99;MQ0=20;MQRankSum=-2.573;QD=11.85;ReadPosRankSum=1.611;VQSLOD=3.0225;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:27:4.18:68,4,0	1/1:14,0:13:12.04:153,12,0	0/0:7,0:1:3.01:0,3,67	0/0:13,0:7:14.88:0,15,197	0/1:22,0:22:30.07:79,0,30	1/1:27,0:27:14.43:186,14,0	1/1:24,0:23:9.49:112,9,0	1/1:1,23:24:67.63:1003,68,0	1/1:19,0:18:24.07:309,24,0	1/1:31,0:29:5.60:111,6,0	1/1:20,0:18:5.72:82,6,0	1/1:21,0:20:11.52:118,12,0	1/1:18,0:17:5.43:56,5,0	1/1:24,0:23:14.83:171,15,0	1/1:35,0:35:29.12:349,29,0	1/1:24,0:24:27.09:363,27,0	1/1:25,0:23:23.92:256,24,0	0/1:19,0:19:19.14:93,0,19	1/1:20,0:19:50.84:733,51,0	1/1:18,0:18:5.99:57,6,0	1/1:34,0:31:3.01:35,3,0	1/1:29,0:27:30.09:373,30,0	0/1:20,0:20:43.54:44,0,58	1/1:22,0:22:20.60:211,21,0	1/1:23,0:23:17.06:194,17,0	1/1:31,0:31:87.19:1274,87,0	1/1:20,0:20:15.52:199,16,0	1/1:17,0:15:42.10:588,42,0
chr10	6036826	.	T	TCC	908.03	PASS	AB=0.988;AC=27;AF=0.563;AN=48;BaseQRankSum=1.247;DP=168;FS=1.905;HRun=1;HaplotypeScore=50.7876;InbreedingCoeff=0.2855;MQ=33.52;MQ0=13;MQRankSum=2.573;QD=7.57;ReadPosRankSum=0.576;VQSLOD=0.3190;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:18:19.89:258,20,0	1/1:4,0:4:0.46:1,0,0	./.	./.	0/1:10,1:10:18.91:33,0,19	0/0:7,0:7:1.39:0,1,12	0/1:4,0:1:0:0,0,0	0/0:5,0:3:4.37:0,4,31	0/0:2,0:2:1.25:0,1,3	0/1:8,0:8:35.74:78,0,36	0/1:4,0:4:0.01:0,0,0	1/1:5,0:5:0.78:83,1,0	1/1:9,0:8:11.71:151,12,0	0/1:8,0:8:11.95:40,0,12	1/1:4,0:3:2.13:5,2,0	1/1:1,0:1:2.22:7,2,0	1/1:12,0:10:4.86:178,5,0	0/0:5,0:4:5.34:0,5,28	0/0:3,0:2:5.35:0,5,29	0/1:8,0:7:0:0,0,0	1/1:6,0:6:5.55:50,6,0	./.	1/1:6,3:9:12.85:112,13,0	1/1:5,0:5:5.93:40,6,0	./.	0/0:5,0:4:6.28:0,6,51	0/1:3,0:3:0:0,0,0	0/0:3,0:1:2.60:0,3,10
chr10	6036835	.	CTCTT	C	2323.22	PASS	AB=0.909;AC=37;AF=0.804;AN=46;BaseQRankSum=0.413;DP=198;FS=4.742;HRun=0;HaplotypeScore=50.3181;InbreedingCoeff=0.3409;MQ=34.13;MQ0=13;MQRankSum=3.960;QD=15.49;ReadPosRankSum=3.028;VQSLOD=2.6358;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,10:16:27.92:475,28,0	1/1:4,0:4:3.85:22,4,0	0/0:9,0:5:14.90:0,15,109	0/0:13,0:1:0.47:0,0,1	1/1:12,2:13:5.36:80,5,0	1/1:8,0:8:1.54:12,2,0	1/1:5,0:2:0.47:1,0,0	1/1:5,0:3:2.97:20,3,0	1/1:2,0:2:2.80:13,3,0	1/1:7,3:10:19.68:228,20,0	1/1:4,0:4:2.62:25,3,0	1/1:3,3:6:13.75:191,14,0	1/1:4,5:8:12.11:222,12,0	0/1:5,3:8:2.17:94,0,2	./.	./.	1/1:8,6:12:25.86:375,26,0	1/1:5,1:6:13.44:87,13,0	0/1:3,0:2:0:0,0,0	./.	1/1:6,1:7:8.61:125,9,0	./.	1/1:12,0:12:21:256,21,0	1/1:7,0:7:11.95:124,12,0	./.	0/1:5,0:4:3.73:44,0,4	0/0:4,0:4:0.47:0,0,1	1/1:4,0:3:5.80:33,6,0
chr10	6036837	.	CTT	C	1293.32	PASS	AB=1.000;AC=36;AF=0.818;AN=44;BaseQRankSum=2.166;DP=200;FS=7.036;HRun=3;HaplotypeScore=51.6683;InbreedingCoeff=0.3212;MQ=34.31;MQ0=13;MQRankSum=3.872;QD=8.86;ReadPosRankSum=2.166;VQSLOD=0.3592;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:17:18.27:213,18,0	1/1:4,0:4:4.21:23,4,0	0/0:10,0:6:17.89:0,18,132	0/0:17,0:1:0.47:0,0,1	1/1:14,0:13:5.98:47,6,0	1/1:7,1:8:2.69:16,3,0	1/1:3,2:2:0.47:1,0,0	1/1:3,0:1:2.97:20,3,0	1/1:2,0:2:2.80:13,3,0	1/1:9,0:9:21.04:150,21,0	1/1:4,0:4:2.63:25,3,0	1/1:6,0:6:14.39:95,14,0	1/1:10,0:9:14.99:113,15,0	0/1:8,0:8:2.12:61,0,2	./.	./.	1/1:14,0:12:26.85:202,27,0	1/1:6,0:6:14.83:101,15,0	./.	./.	1/1:7,0:7:8.79:59,9,0	./.	1/1:13,0:13:18.83:110,19,0	1/1:7,0:7:11.88:85,12,0	./.	0/1:4,0:3:6.60:33,0,7	0/0:0,4:4:0:0,0,0	1/1:4,0:3:5.80:33,6,0
chr10	6036870	.	T	TCA	339.69	PASS	AB=1.000;AC=17;AF=0.340;AN=50;BaseQRankSum=4.634;DP=324;FS=13.796;HRun=0;HaplotypeScore=102.3268;InbreedingCoeff=0.6188;MQ=36.84;MQ0=18;MQRankSum=-1.677;QD=3.50;ReadPosRankSum=-2.235;VQSLOD=1.1801;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:25:2.25:2,0,385	0/0:3,0:2:3.01:0,3,39	0/0:41,0:12:30.01:0,30,344	0/0:61,0:19:31.27:0,31,309	0/0:14,0:14:8.80:0,9,99	1/1:8,0:7:1.77:4,2,0	0/1:7,0:4:0.01:0,0,0	1/1:12,0:10:19.65:139,20,0	./.	0/0:9,0:9:17.92:0,18,164	0/0:4,0:4:3.01:0,3,40	0/0:7,0:7:8.86:0,9,118	0/0:12,0:11:7.49:0,7,187	0/0:9,0:9:5.64:0,6,68	0/0:3,0:2:0:0,0,0	./.	0/0:18,0:16:36.10:0,36,419	0/0:7,0:7:18.05:0,18,207	1/1:5,0:5:8.98:82,9,0	./.	0/0:10,0:10:14.97:0,15,148	0/1:7,0:7:0:0,0,0	0/0:14,0:16:14.67:0,15,178	0/0:9,0:8:11.95:0,12,119	1/1:6,0:6:2.38:10,2,0	1/1:6,7:12:24.72:159,25,0	1/1:8,0:6:8.79:52,9,0	1/1:5,0:5:2.76:40,3,0
chr10	6036931	.	C	CAT	4885.02	PASS	AB=0.982;AC=42;AF=0.750;AN=56;BaseQRankSum=-2.332;DP=441;FS=1.333;HRun=0;HaplotypeScore=89.3206;InbreedingCoeff=0.1049;MQ=56.08;MQ0=13;MQRankSum=2.400;QD=12.34;ReadPosRankSum=5.274;VQSLOD=4.5971;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:28,4:32:49.94:631,50,0	1/1:6,0:4:9:96,9,0	0/0:24,0:12:26.14:0,26,273	0/0:21,0:13:29.25:0,29,362	0/1:13,1:14:4.88:100,0,5	1/1:22,0:21:32.86:257,33,0	1/1:17,0:15:29.09:216,29,0	0/1:24,0:24:28.45:312,0,28	1/1:2,0:2:5.94:43,6,0	1/1:14,0:14:29.24:322,29,0	1/1:14,0:13:18:195,18,0	1/1:16,0:15:34.15:288,34,0	0/1:10,0:9:1.56:55,0,2	1/1:19,0:19:17.92:143,18,0	1/1:7,0:6:5.99:49,6,0	0/1:7,1:7:6.88:52,0,7	0/1:24,0:24:4.24:225,0,4	0/1:13,0:13:19.07:134,0,19	0/1:14,0:14:0.35:177,0,0	1/1:13,0:12:17.78:145,18,0	1/1:18,1:20:29.53:299,30,0	1/1:17,0:17:35.82:326,36,0	1/1:29,0:28:32.55:282,33,0	1/1:11,0:11:11.45:81,11,0	1/1:13,0:12:20.84:219,21,0	0/1:18,0:18:40.90:84,0,41	0/1:10,0:9:6.94:55,0,7	0/1:8,0:8:17.77:100,0,18
chr10	6037370	.	TCAAA	T	2477.67	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=9.764;DP=807;FS=0.000;HRun=0;HaplotypeScore=125.6684;InbreedingCoeff=0.9985;MQ=84.10;MQ0=0;MQRankSum=-5.445;QD=43.47;ReadPosRankSum=4.148;VQSLOD=4.2293;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,56:57:99:2573,135,0	0/0:10,0:10:30.10:0,30,789	0/0:26,0:26:72.22:0,72,1810	0/0:23,0:23:59.71:0,60,1336	0/0:25,0:25:75.26:0,75,2024	0/0:18,0:18:54.19:0,54,1424	0/0:25,0:25:72.24:0,72,1916	0/0:43,0:43:99:0,123,3289	0/0:28,0:28:84.29:0,84,2301	0/0:35,0:35:99:0,105,2785	0/0:23,0:23:69.24:0,69,1856	0/0:36,0:36:99:0,105,2846	0/0:37,0:37:99:0,111,2988	0/0:40,0:40:99:0,117,3091	0/0:29,0:29:81.26:0,81,2148	0/0:22,0:22:66.23:0,66,1717	0/0:42,0:42:99:0,126,3324	0/0:31,0:31:90.31:0,90,2465	0/0:27,0:27:81.28:0,81,2136	0/0:18,0:18:51.18:0,51,1397	0/0:37,0:37:99:0,108,2808	0/0:26,0:26:78.27:0,78,2100	0/0:24,0:24:72.25:0,72,1950	0/0:29,0:29:84.29:0,84,2276	0/0:33,0:32:96.29:0,96,2535	0/0:27,0:27:81.28:0,81,2207	0/0:27,0:27:78.26:0,78,2067	0/0:9,0:9:27.09:0,27,716
chr10	6040011	.	T	TA	3071.14	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=8.354;DP=622;FS=1.488;HRun=4;HaplotypeScore=74.3990;InbreedingCoeff=0.9988;MQ=87.80;MQ0=0;MQRankSum=-2.648;QD=34.12;ReadPosRankSum=-1.174;VQSLOD=3.7357;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,105,1167	0/0:10,0:10:30.09:0,30,340	0/0:24,0:24:58.56:0,59,621	0/0:20,0:20:50.43:0,50,570	0/0:20,0:20:57.16:0,57,647	0/0:17,0:17:48.14:0,48,544	0/0:21,0:21:51.11:0,51,559	1/1:1,23:24:69.21:927,69,0	0/0:18,0:18:54.14:0,54,603	0/0:37,0:37:99:0,102,1148	0/0:17,0:17:51.15:0,51,578	0/0:23,0:23:60.15:0,60,671	0/0:11,0:11:30.07:0,30,331	0/0:21,0:21:63.16:0,63,705	0/0:18,0:18:51.14:0,51,579	0/0:28,0:28:81.22:0,81,909	0/0:35,0:35:99:0,105,1181	0/0:19,0:19:57.16:0,57,647	0/0:16,0:16:45.12:0,45,502	0/0:21,0:21:54.15:0,54,612	0/0:21,0:21:60.17:0,60,681	0/0:27,0:27:81.23:0,81,919	0/0:14,0:14:42.12:0,42,476	0/0:26,0:26:78.22:0,78,884	0/0:29,0:29:78.21:0,78,874	1/1:3,21:24:26.16:746,26,0	1/1:0,32:32:90.30:1230,90,0	1/1:2,8:10:24.08:328,24,0
chr10	6041037	.	G	GATGGATGGATGGATGA	22413.89	PASS	AB=0.530;AC=42;AF=0.750;AN=56;BaseQRankSum=-4.767;DP=904;FS=0.000;HRun=0;HaplotypeScore=237.7126;InbreedingCoeff=0.7881;MQ=56.38;MQ0=4;MQRankSum=-4.349;QD=32.20;ReadPosRankSum=0.905;VQSLOD=3.8315;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:33,0:33:49.31:1401,49,0	1/1:2,8:11:8.78:485,9,0	0/0:48,0:37:61.64:0,62,950	0/0:30,0:22:35.94:0,36,534	1/1:1,20:33:32.66:463,33,0	1/1:7,23:42:9.56:1247,10,0	1/1:21,0:21:50.78:784,51,0	0/0:43,0:43:99:0,108,1359	1/1:5,25:38:12.04:931,12,0	1/1:0,33:38:77.47:2623,77,0	1/1:2,12:19:14.68:92,15,0	1/1:4,22:41:14.94:840,15,0	0/1:3,17:33:3.95:915,0,4	1/1:3,31:41:12.04:930,12,0	1/1:3,34:48:18.06:1396,18,0	1/1:2,32:43:30.10:2326,30,0	1/1:15,0:15:29.94:855,30,0	1/1:17,0:17:37.63:589,38,0	1/1:29,0:28:81.02:1579,81,0	1/1:4,29:38:53.80:1456,54,0	1/1:15,0:36:23.88:412,24,0	1/1:1,19:26:23.82:585,24,0	1/1:4,18:29:3.27:234,3,0	0/1:4,21:29:5.76:167,0,6	1/1:2,26:33:29.69:2104,30,0	0/0:25,0:25:27.22:0,27,1909	0/0:43,0:42:99:0,105,3034	0/0:19,0:19:35.17:0,35,1360
chr10	6041043	.	T	TG	1841.31	PASS	AB=0.921;AC=21;AF=0.375;AN=56;BaseQRankSum=13.438;DP=783;FS=3.689;HRun=1;HaplotypeScore=148.8237;InbreedingCoeff=-0.4829;MQ=60.55;MQ0=3;MQRankSum=-9.009;QD=3.44;ReadPosRankSum=3.818;VQSLOD=0.5661;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:21,11:33:99:270,0,628	1/1:9,0:9:7.24:30,7,0	0/0:45,0:37:96.22:0,96,1185	0/0:25,0:19:51.16:0,51,646	0/0:24,0:24:11.47:0,11,426	0/1:34,1:35:55.18:80,0,55	0/1:12,7:19:99:168,0,383	0/0:42,0:42:99:0,123,1561	0/1:31,0:31:24.71:33,0,25	0/1:32,0:31:99:161,0,423	0/1:16,0:16:8.25:8,0,86	0/1:27,1:28:57.40:91,0,57	0/1:25,0:25:25.18:32,0,25	0/1:35,0:34:31.66:32,0,61	0/1:43,0:43:47.37:47,0,55	0/1:36,0:36:48.28:73,0,48	0/1:8,6:14:99:146,0,171	0/1:12,5:17:99:162,0,310	0/1:21,9:28:99:390,0,539	0/1:29,0:29:43.68:44,0,371	0/1:26,5:31:36.41:101,0,36	0/1:25,0:25:36.49:36,0,163	0/1:21,0:21:13.32:13,0,33	0/0:26,0:26:3:0,3,37	0/1:27,0:27:46.98:85,0,47	0/0:26,1:27:36.79:0,37,943	0/0:37,0:37:99:0,111,1440	0/0:20,1:21:6.59:0,7,577
chr10	6043108	.	AG	A	2677.75	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=2.538;DP=761;FS=2.565;HRun=4;HaplotypeScore=122.0894;InbreedingCoeff=0.9950;MQ=90.95;MQ0=0;MQRankSum=-0.977;QD=31.14;ReadPosRankSum=-2.117;VQSLOD=1.8893;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,123,1722	0/0:9,0:9:27.08:0,27,360	0/0:33,0:33:90.30:0,90,1258	0/0:30,0:30:69.22:0,69,917	0/0:27,0:27:78.23:0,78,1047	0/0:18,0:18:48.16:0,48,672	0/0:33,0:33:93.31:0,93,1302	1/1:2,26:27:75.23:900,75,0	0/0:20,0:20:60.20:0,60,840	0/0:27,0:27:81.20:0,81,1096	0/0:18,0:18:54.18:0,54,755	0/0:38,0:38:99:0,105,1420	0/0:34,0:34:99:0,102,1426	0/0:32,0:32:90.30:0,90,1260	0/0:29,0:29:87.29:0,87,1218	0/0:19,0:19:54.18:0,54,756	0/0:25,0:25:72.22:0,72,975	0/0:27,0:27:78.23:0,78,1071	0/0:25,0:25:75.20:0,75,994	0/0:30,0:29:84.27:0,84,1157	0/0:45,0:45:99:0,129,1786	0/0:28,0:28:84.27:0,84,1159	0/0:17,0:17:51.05:0,51,653	0/0:38,0:38:99:0,111,1555	0/0:30,0:30:87.27:0,87,1185	1/1:1,24:25:27.19:749,27,0	1/1:0,28:28:84.26:1008,84,0	1/1:0,5:5:15.05:180,15,0
chr10	6044005	.	C	CAGAG	39839.63	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-10.503;DP=942;FS=1.643;HRun=0;HaplotypeScore=160.7506;InbreedingCoeff=0.9896;MQ=71.69;MQ0=1;MQRankSum=-7.608;QD=48.35;ReadPosRankSum=9.864;VQSLOD=4.9759;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,55:63:99:2684,102,0	1/1:2,8:10:15.05:394,15,0	0/0:43,0:37:68.40:0,68,1154	0/0:71,0:61:58.23:0,58,1660	1/1:1,31:33:53.90:1424,54,0	1/1:2,26:29:51.18:1345,51,0	1/1:4,49:55:92.90:2450,93,0	1/1:7,31:39:96.25:2018,96,0	1/1:3,22:27:45.15:1171,45,0	1/1:6,35:42:99:2618,111,0	1/1:3,21:24:39.13:1029,39,0	1/1:2,28:30:59.77:1583,60,0	1/1:3,20:23:39.13:1027,39,0	1/1:2,31:33:69.24:1819,69,0	1/1:7,34:42:60.20:1583,60,0	1/1:2,30:33:69.24:1792,69,0	1/1:2,34:36:72.25:1899,72,0	1/1:1,21:22:36.12:944,36,0	1/1:3,15:20:51.13:1096,51,0	1/1:2,26:28:54.18:1298,54,0	1/1:2,23:26:42.14:1109,42,0	1/1:2,32:35:61.56:1660,62,0	1/1:3,32:37:68.96:1817,69,0	1/1:0,31:32:57.20:1505,57,0	1/1:5,30:35:51.16:1346,51,0	1/1:0,29:29:84.26:1918,84,0	1/1:0,29:31:69.24:1816,69,0	1/1:0,7:9:21:493,21,0
chr10	6044101	.	GAC	G	4444.09	PASS	AB=0.750;AC=40;AF=0.714;AN=56;BaseQRankSum=7.364;DP=598;FS=14.073;HRun=0;HaplotypeScore=139.2028;InbreedingCoeff=0.8301;MQ=56.50;MQ0=11;MQRankSum=4.539;QD=13.43;ReadPosRankSum=2.503;VQSLOD=4.2776;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:58.15:0,58,612	1/1:10,0:10:23.89:187,24,0	0/0:57,0:28:65.51:0,66,806	0/0:69,0:32:31.99:0,32,638	1/1:22,0:22:38.92:315,39,0	1/1:20,0:20:38.93:319,39,0	1/1:13,1:14:30.31:234,30,0	0/0:41,0:39:99:0,99,1382	1/1:19,0:19:39.33:318,39,0	1/1:22,0:22:54.36:455,54,0	1/1:13,0:13:17.84:145,18,0	1/1:17,0:17:41.84:333,42,0	1/1:14,0:14:0.12:27,0,0	0/1:0,10:13:0.97:19,0,1	1/1:16,0:16:33.83:273,34,0	1/1:23,3:26:48.87:391,49,0	1/1:13,0:14:11.68:119,12,0	0/1:8,0:8:2.02:90,0,2	1/1:16,1:16:29.52:300,30,0	1/1:7,0:7:11.98:100,12,0	1/1:14,0:13:11.97:96,12,0	1/1:21,2:23:30.43:249,30,0	1/1:11,0:12:14.88:115,15,0	1/1:12,0:15:17.70:131,18,0	1/1:13,1:14:26.96:227,27,0	0/0:23,0:23:25.78:0,26,830	0/0:34,0:34:81.20:0,81,1336	0/0:9,0:9:18.01:0,18,249
chr10	6044107	.	GAGAGAGAGAGAA	G	4014.19	PASS	AB=1.000;AC=45;AF=0.804;AN=56;BaseQRankSum=5.946;DP=552;FS=22.949;HRun=0;HaplotypeScore=205.5934;InbreedingCoeff=0.5564;MQ=54.65;MQ0=13;MQRankSum=-0.101;QD=8.86;ReadPosRankSum=1.679;VQSLOD=1.1458;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:35,0:35:51.93:52,0,846	1/1:10,0:10:20.82:173,21,0	0/1:48,0:22:4.06:4,0,125	0/1:65,0:27:20.09:20,0,95	1/1:20,0:20:20.46:171,20,0	1/1:19,0:19:29.25:243,29,0	1/1:14,0:14:26.81:248,27,0	0/0:34,0:32:65.91:0,66,628	1/1:14,0:14:20.64:203,21,0	1/1:20,0:19:35.79:266,36,0	1/1:13,0:13:11.46:98,11,0	1/1:15,0:15:20.65:175,21,0	1/1:13,0:13:6.41:77,6,0	1/1:14,1:15:11.53:120,12,0	1/1:13,0:13:23.90:261,24,0	1/1:20,3:23:46.28:537,46,0	1/1:15,0:15:17.02:143,17,0	1/1:5,0:5:8.96:69,9,0	1/1:16,1:14:29.42:384,29,0	1/1:7,0:7:11.98:99,12,0	1/1:14,0:13:1.43:64,1,0	1/1:19,2:21:23.29:265,23,0	1/1:9,1:10:8.57:63,9,0	1/1:13,1:14:0.24:145,0,0	1/1:12,1:13:14.23:135,14,0	0/0:22,0:22:45.07:0,45,892	0/0:35,0:35:71.28:0,71,1777	0/0:8,0:8:11.78:0,12,274
chr10	6044109	.	GAGAGAGAGAA	G	3869.60	PASS	AB=1.000;AC=45;AF=0.804;AN=56;BaseQRankSum=6.183;DP=542;FS=19.410;HRun=0;HaplotypeScore=187.7504;InbreedingCoeff=0.5826;MQ=54.78;MQ0=13;MQRankSum=-1.149;QD=8.70;ReadPosRankSum=1.610;VQSLOD=1.5120;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:33:80.76:81,0,591	1/1:10,0:10:20.82:176,21,0	0/1:45,0:20:4.21:4,0,125	0/1:64,0:27:22.01:22,0,94	1/1:19,0:19:17.47:148,17,0	1/1:20,0:20:1.96:213,2,0	1/1:13,0:13:26.80:233,27,0	0/0:33,0:31:65.91:0,66,593	1/1:14,0:14:25.97:208,26,0	1/1:19,0:18:40.39:320,40,0	1/1:13,0:13:11.51:98,12,0	1/1:15,0:15:20.66:168,21,0	1/1:15,0:15:5.88:37,6,0	1/1:14,1:15:11.27:90,11,0	1/1:12,0:12:23.90:233,24,0	1/1:24,0:24:48.85:484,49,0	1/1:13,1:14:16.51:140,17,0	1/1:5,0:5:8.96:69,9,0	1/1:16,1:14:32.93:370,33,0	1/1:7,0:7:11.98:99,12,0	1/1:13,0:12:12.16:104,12,0	1/1:21,0:21:25.11:239,25,0	1/1:10,0:10:8.57:63,9,0	1/1:12,1:13:10.44:143,10,0	1/1:13,0:13:14.23:127,14,0	0/0:21,0:21:44.86:0,45,795	0/0:35,0:35:71.28:0,71,1493	0/0:8,0:8:11.78:0,12,202
chr10	6044117	.	GAA	G	3948.64	PASS	AB=1.000;AC=46;AF=0.821;AN=56;BaseQRankSum=6.679;DP=488;FS=3.629;HRun=3;HaplotypeScore=119.5311;InbreedingCoeff=0.6548;MQ=51.84;MQ0=16;MQRankSum=1.323;QD=9.82;ReadPosRankSum=-0.076;VQSLOD=0.2666;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:30,1:30:7.19:230,7,0	1/1:8,0:8:20.77:157,21,0	0/1:37,0:14:4.02:4,0,125	0/1:47,0:17:19.57:20,0,94	1/1:14,1:15:20.48:182,20,0	1/1:18,0:17:31.93:254,32,0	1/1:13,0:13:25.04:188,25,0	0/0:30,0:28:75.83:0,76,596	1/1:13,0:13:23.04:169,23,0	1/1:18,0:17:41.65:367,42,0	1/1:12,0:12:11.47:98,11,0	1/1:11,0:11:23.62:186,24,0	1/1:2,13:15:5.50:48,6,0	1/1:15,0:15:12.89:136,13,0	1/1:11,0:11:26.77:208,27,0	1/1:26,1:27:54.67:419,55,0	1/1:16,0:16:21.15:134,21,0	1/1:8,0:8:6.68:123,7,0	1/1:14,0:11:31.58:240,32,0	1/1:6,0:5:11.98:99,12,0	1/1:15,0:14:17.64:143,18,0	1/1:21,0:21:25.41:198,25,0	1/1:8,0:8:8.54:63,9,0	1/1:13,0:13:22.68:184,23,0	1/1:10,0:10:12.15:100,12,0	0/0:16,0:15:3.35:0,3,306	0/0:34,0:34:70.74:0,71,601	0/0:6,0:5:14.41:0,14,89
chr10	6044119	.	A	AAGAG	604.78	PASS	AB=1.000;AC=33;AF=0.660;AN=50;BaseQRankSum=-2.473;DP=503;FS=6.271;HRun=0;HaplotypeScore=149.6361;InbreedingCoeff=0.2153;MQ=50.02;MQ0=16;MQRankSum=0.716;QD=1.67;ReadPosRankSum=-3.640;VQSLOD=1.0278;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:29:0.09:0,0,176	0/1:10,0:10:0:0,0,0	./.	./.	1/1:15,0:15:2.60:10,3,0	0/0:20,0:19:2.59:0,3,10	0/0:13,0:13:2.96:0,3,19	1/1:35,0:33:2.36:5,2,0	0/1:14,0:14:0.07:0,0,0	1/1:19,0:18:3.58:35,4,0	1/1:14,0:14:2.89:25,3,0	0/1:11,0:11:0:0,0,0	1/1:13,0:13:4.99:26,5,0	0/1:15,0:15:6.04:31,0,6	1/1:12,0:12:2.99:24,3,0	0/1:28,0:28:11.67:21,0,12	1/1:16,0:16:5.94:28,6,0	1/1:10,0:10:13.03:79,13,0	0/0:14,0:11:7.18:0,7,30	./.	1/1:16,0:15:1.02:38,1,0	0/1:22,0:22:16.89:17,0,19	0/1:10,0:10:0:0,0,0	0/1:13,0:13:0.64:25,0,1	0/0:11,0:11:2.92:0,3,17	1/1:16,0:16:15.24:174,15,0	1/1:25,9:36:10.58:158,11,0	1/1:6,0:5:3.01:33,3,0
chr10	6045459	.	T	TGTG	4699.47	PASS	AB=1.000;AC=38;AF=0.760;AN=50;BaseQRankSum=1.683;DP=373;FS=27.921;HRun=0;HaplotypeScore=80.4264;InbreedingCoeff=0.4713;MQ=81.97;MQ0=16;MQRankSum=-3.444;QD=17.21;ReadPosRankSum=2.388;VQSLOD=2.9039;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:21:17.38:201,17,0	0/0:4,0:3:0.47:0,0,1	0/0:49,0:29:33.82:0,34,633	0/0:28,0:15:29.43:0,29,367	0/0:5,0:5:0.47:0,0,1	1/1:14,3:17:23.98:402,24,0	1/1:21,10:30:63.13:1091,63,0	1/1:8,0:8:3.36:27,3,0	1/1:8,4:12:27.09:509,27,0	1/1:8,0:8:5.22:31,5,0	./.	1/1:10,0:9:2.44:6,2,0	1/1:6,0:6:1.18:3,1,0	1/1:7,0:6:4.35:27,4,0	1/1:15,5:19:36.06:563,36,0	1/1:9,7:16:30.07:531,30,0	0/1:13,0:12:0.29:20,0,0	1/1:11,0:10:4.93:26,5,0	1/1:4,6:9:21.07:349,21,0	1/1:5,14:17:20.98:296,21,0	0/1:22,0:21:4.38:56,0,4	1/1:5,2:11:4.65:125,5,0	./.	1/1:8,0:8:2.78:25,3,0	1/1:7,6:13:19.34:355,19,0	0/0:5,0:5:0.46:0,0,1	1/1:7,0:6:8.21:57,8,0	./.
chr10	6045466	.	GTGA	G	3124.22	PASS	AB=0.967;AC=48;AF=0.889;AN=54;BaseQRankSum=0.467;DP=377;FS=11.261;HRun=0;HaplotypeScore=80.7167;InbreedingCoeff=0.3852;MQ=68.56;MQ0=39;MQRankSum=-1.675;QD=10.11;ReadPosRankSum=1.976;VQSLOD=2.2675;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:20,1:18:38.68:290,39,0	1/1:3,0:2:5.92:41,6,0	0/0:41,0:21:36.60:0,37,480	0/0:26,0:13:32.77:0,33,324	1/1:4,0:4:8.98:72,9,0	0/1:13,1:14:64.18:114,0,64	1/1:37,2:35:4.19:255,4,0	1/1:7,0:7:16.76:133,17,0	1/1:12,3:15:4.12:125,4,0	1/1:5,5:7:3.41:87,3,0	1/1:7,0:6:11.97:96,12,0	1/1:8,0:6:14.97:121,15,0	1/1:8,0:6:17.88:136,18,0	1/1:8,0:6:17.96:145,18,0	1/1:19,1:17:15.84:233,16,0	1/1:19,1:19:20.97:247,21,0	1/1:12,0:10:19.37:119,19,0	1/1:10,0:9:23.92:189,24,0	0/1:11,0:9:49.48:102,0,49	1/1:17,0:15:8.13:60,8,0	1/1:23,0:17:27.79:213,28,0	1/1:10,1:10:7.70:50,8,0	1/1:3,0:3:8.98:72,9,0	1/1:8,0:7:12.89:96,13,0	1/1:15,0:15:2.40:72,2,0	1/1:8,0:5:9:78,9,0	1/1:7,0:6:14.45:121,14,0	./.
chr10	6045490	.	ATGG	A	132.07	PASS	AB=1.000;AC=20;AF=0.476;AN=42;BaseQRankSum=2.810;DP=362;FS=8.488;HRun=0;HaplotypeScore=69.9665;InbreedingCoeff=0.1677;MQ=31.57;MQ0=86;MQRankSum=-0.520;QD=0.81;ReadPosRankSum=3.192;VQSLOD=0.5202;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:9:0.37:0,0,0	./.	./.	./.	./.	0/1:15,0:12:15.42:15,0,69	0/0:46,3:40:1.71:0,2,83	1/1:5,0:3:0.47:1,0,0	0/1:17,0:13:13.07:13,0,40	./.	0/0:9,0:5:2.80:0,3,13	0/0:9,0:7:1.83:0,2,14	0/0:11,0:8:0.47:0,0,1	1/1:8,0:5:2.22:7,2,0	1/1:14,0:9:8.69:54,9,0	1/1:22,1:18:10.11:92,10,0	0/1:9,0:7:2.35:2,0,19	0/0:7,0:6:2.95:0,3,19	0/1:17,0:12:10.61:11,0,15	0/0:16,0:13:2.74:0,3,12	./.	1/1:11,1:11:6.02:33,6,0	0/0:4,0:1:0.47:0,0,1	1/1:11,0:4:2.04:7,2,0	1/1:18,0:17:1.57:10,2,0	0/0:15,0:11:0.38:0,0,30	0/0:7,0:5:5.91:0,6,50	./.
chr10	6045505	.	G	GTGA	1004.03	PASS	AB=0.892;AC=13;AF=0.271;AN=48;BaseQRankSum=3.073;DP=322;FS=10.696;HRun=0;HaplotypeScore=59.9117;InbreedingCoeff=-0.2168;MQ=25.64;MQ0=87;MQRankSum=-1.322;QD=5.00;ReadPosRankSum=1.060;VQSLOD=0.7260;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:8:10.92:0,11,48	./.	./.	0/1:4,0:1:0:0,0,0	./.	0/1:14,2:11:70.01:103,0,70	0/1:41,4:37:45.21:119,0,45	0/1:6,0:3:7.88:37,0,8	0/1:14,4:13:12.55:161,0,13	0/0:8,0:1:2.80:0,3,13	0/0:7,0:2:3:0,3,25	0/0:11,0:7:13.96:0,14,75	0/0:12,0:9:15.14:0,15,80	0/0:8,0:3:2.89:0,3,16	0/1:11,3:9:1.20:174,0,1	0/1:15,7:17:16.38:254,0,16	0/1:10,0:7:8.06:8,0,53	0/0:4,0:3:8.88:0,9,58	0/1:12,2:9:8.21:154,0,8	0/1:10,2:9:2.27:2,0,15	0/0:29,0:8:0:0,0,0	0/1:9,2:10:18.95:34,0,19	0/0:6,0:1:1.25:0,1,3	0/0:10,0:3:5.46:0,5,33	0/1:13,4:16:13.69:53,0,14	0/1:12,0:9:20:28,0,20	0/0:5,0:3:6.43:0,6,46	./.
chr10	6045555	.	G	GT	573.20	PASS	AB=0.841;AC=12;AF=0.261;AN=46;BaseQRankSum=-3.184;DP=281;FS=0.000;HRun=1;HaplotypeScore=50.6720;InbreedingCoeff=0.2109;MQ=37.41;MQ0=44;MQRankSum=1.362;QD=5.26;ReadPosRankSum=-1.520;VQSLOD=-0.2460;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:21.07:0,21,276	./.	0/0:26,0:2:3:0,3,27	0/0:44,0:6:8.30:0,8,47	./.	1/1:4,4:7:8.71:117,9,0	0/1:18,4:20:61.37:134,0,61	0/1:16,0:12:0.19:0,0,94	0/1:8,8:16:58.37:164,0,58	./.	0/0:3,0:2:3:0,3,25	0/0:8,0:7:12.40:0,12,76	0/0:7,0:6:14.56:0,15,92	0/0:8,0:7:8.65:0,9,26	0/1:6,4:9:28.05:79,0,28	1/1:9,4:12:9.03:133,9,0	0/1:11,0:10:10.79:15,0,11	0/0:3,0:2:3.11:0,3,8	./.	1/1:1,0:1:2.99:24,3,0	0/0:23,0:15:14.19:0,14,64	0/0:4,0:3:6:0,6,56	0/0:5,0:4:3.06:0,3,8	0/0:11,0:10:11.55:0,12,64	0/1:9,1:10:0.34:39,0,0	0/0:4,0:2:0.89:0,1,2	0/0:5,0:3:6.02:0,6,80	./.
chr10	6045558	.	GT	G	143.45	PASS	AB=1.000;AC=11;AF=0.229;AN=48;BaseQRankSum=-2.364;DP=260;FS=1.369;HRun=1;HaplotypeScore=46.5265;InbreedingCoeff=0.4937;MQ=39.35;MQ0=38;MQRankSum=-1.426;QD=3.98;ReadPosRankSum=-0.030;VQSLOD=0.2314;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,8:12:20.95:172,21,0	./.	0/0:26,0:2:3:0,3,29	0/0:44,0:6:11.64:0,12,109	0/0:2,0:2:3:0,3,29	0/0:8,0:7:8.73:0,9,124	0/0:16,0:14:9.39:0,9,291	0/0:16,0:12:25.73:0,26,192	0/0:15,0:14:24.02:0,24,313	./.	1/1:2,0:2:3:25,3,0	0/1:8,0:7:1.88:2,0,138	1/1:6,1:7:4.73:22,5,0	0/0:7,0:6:15.04:0,15,159	0/0:10,0:9:17.54:0,18,237	0/0:7,0:7:9.03:0,9,140	0/0:13,0:12:24.23:0,24,212	0/0:4,0:3:2.24:0,2,55	./.	0/0:1,0:1:3.01:0,3,43	0/0:21,0:15:14.67:0,15,221	0/0:4,0:3:5.78:0,6,52	0/0:5,0:4:5.85:0,6,60	0/0:12,0:10:23.23:0,23,238	0/0:6,0:6:1.09:0,1,43	1/1:3,0:2:0.47:1,0,0	1/1:2,2:3:5.98:48,6,0	./.
chr10	6045806	.	ATATTATTATTAT	A	873.85	PASS	AC=14;AF=0.368;AN=38;BaseQRankSum=2.675;DP=205;FS=1.223;HRun=0;HaplotypeScore=77.7252;InbreedingCoeff=0.5915;MQ=86.87;MQ0=2;MQRankSum=-4.846;QD=18.21;ReadPosRankSum=2.201;VQSLOD=1.5672;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:13:15.05:0,15,785	1/1:0,1:1:3.01:103,3,0	./.	./.	1/1:2,0:2:3.01:38,3,0	0/0:7,0:7:15.05:0,15,872	./.	0/0:34,0:34:36.12:0,36,1301	0/0:10,0:10:3.01:0,3,122	./.	1/1:2,0:5:5.99:47,6,0	./.	1/1:4,2:6:3.48:104,3,0	./.	0/0:9,0:9:3.01:0,3,43	0/0:2,0:2:6.02:0,6,350	1/1:10,6:16:15.04:305,15,0	1/1:11,6:17:9.03:309,9,0	0/0:11,0:11:6.01:0,6,200	0/0:1,0:1:3.01:0,3,173	./.	./.	1/1:0,1:1:3.01:103,3,0	./.	0/0:6,0:6:9.03:0,9,526	0/0:4,0:4:6.02:0,6,275	0/0:4,0:4:9.03:0,9,410	0/0:5,0:7:9.03:0,9,476
chr10	6046183	.	TG	T	4161	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-2.038;DP=680;FS=0.376;HRun=2;HaplotypeScore=113.3911;InbreedingCoeff=0.9248;MQ=87.79;MQ0=0;MQRankSum=-2.425;QD=35.26;ReadPosRankSum=-0.299;VQSLOD=3.1777;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:90.28:0,90,1311	0/0:7,0:7:21.07:0,21,315	0/0:28,0:28:72.20:0,72,1014	0/0:20,0:20:45.15:0,45,626	0/0:27,0:27:81.27:0,81,1212	0/0:23,0:23:69.23:0,69,990	0/0:20,0:20:57.19:0,57,824	1/1:0,39:39:99:1464,114,0	0/0:25,0:25:75.24:0,75,1068	0/0:22,0:22:66.21:0,66,968	0/0:29,0:29:81.23:0,81,1169	0/0:24,0:24:69.21:0,69,994	0/0:28,0:28:84.26:0,84,1222	0/0:26,0:26:78.26:0,78,1167	0/0:36,0:36:99:0,108,1539	0/0:31,0:31:93.31:0,93,1338	0/0:14,0:14:42.14:0,42,629	0/0:13,0:13:36.12:0,36,539	0/0:28,0:28:84.19:0,84,1069	0/0:18,0:18:54.16:0,54,743	0/0:47,0:47:99:0,141,2028	0/0:16,0:16:48.11:0,48,657	0/0:15,0:15:45.15:0,45,674	0/0:20,0:20:60.20:0,60,899	0/0:15,0:15:45.14:0,45,635	1/1:2,29:31:0.32:984,0,0	1/1:0,21:21:60.19:778,60,0	1/1:0,27:27:72.23:935,72,0
chr10	6046563	.	T	TA	8828.76	PASS	AB=0.978;AC=34;AF=0.607;AN=56;BaseQRankSum=1.412;DP=593;FS=1.474;HRun=6;HaplotypeScore=77.1209;InbreedingCoeff=0.7207;MQ=77.32;MQ0=0;MQRankSum=-2.089;QD=22.47;ReadPosRankSum=0.159;VQSLOD=3.9628;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:16:37.41:158,37,0	1/1:2,6:8:18.06:226,18,0	0/1:16,0:17:9.70:10,0,77	0/1:9,0:8:11.85:21,0,12	1/1:3,22:25:63.13:772,63,0	0/0:22,0:22:57.12:0,57,581	0/0:12,0:12:33.05:0,33,323	0/1:27,0:27:28:105,0,28	0/0:24,0:24:66.14:0,66,668	1/1:1,29:30:84.22:1015,84,0	1/1:3,32:35:96.04:1107,96,0	1/1:1,18:19:48.15:604,48,0	1/1:0,13:13:39.12:490,39,0	1/1:3,22:25:57.18:715,57,0	0/0:24,0:24:63.14:0,63,642	0/0:16,0:16:45.09:0,45,452	1/1:2,22:24:45.14:566,45,0	1/1:1,8:9:24.08:302,24,0	0/0:22,0:22:57.10:0,57,569	0/0:31,0:31:78.10:0,78,766	1/1:1,24:25:63.20:792,63,0	0/0:24,0:24:60.12:0,60,606	1/1:4,23:27:63.20:792,63,0	1/1:2,19:21:54.17:679,54,0	0/0:25,0:25:72.15:0,72,730	0/1:29,1:30:8.33:190,0,8	1/1:17,0:16:33.27:139,33,0	1/1:16,0:16:34.18:146,34,0
chr10	6046569	.	A	AT	5307.79	PASS	AB=1.000;AC=33;AF=0.589;AN=56;BaseQRankSum=12.504;DP=581;FS=2.765;HRun=7;HaplotypeScore=84.9762;InbreedingCoeff=0.8161;MQ=77.07;MQ0=0;MQRankSum=-1.579;QD=14.83;ReadPosRankSum=2.220;VQSLOD=4.8690;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,20:20:42.13:507,42,0	1/1:6,0:6:16.23:67,16,0	0/0:17,0:17:0.25:0,0,45	0/0:8,0:7:2.76:0,3,24	1/1:23,0:23:16.45:215,16,0	0/0:23,0:23:66.06:0,66,619	0/0:12,0:12:36.04:0,36,342	1/1:3,21:24:63.13:701,63,0	0/0:23,0:23:66.04:0,66,625	1/1:30,0:30:49.73:267,50,0	1/1:33,0:33:58.50:332,58,0	1/1:18,0:18:43.55:185,44,0	1/1:15,0:15:14.92:127,15,0	1/1:23,0:23:8:185,8,0	0/0:25,0:25:75.08:0,75,705	0/0:19,0:19:54.03:0,54,500	1/1:23,0:23:22.50:168,23,0	1/1:10,0:10:1.25:82,1,0	0/0:21,0:21:54.07:0,54,517	0/0:28,0:28:75.10:0,75,715	1/1:26,0:26:19.81:209,20,0	0/0:22,0:22:63.08:0,63,599	1/1:23,0:23:58.91:287,59,0	0/1:23,0:23:24.57:159,0,25	0/0:25,0:25:72.11:0,72,691	1/1:4,25:29:77.78:877,78,0	1/1:0,15:14:38.62:470,39,0	1/1:0,17:17:39.12:471,39,0
chr10	6048283	.	TG	T	8386.53	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=9.020;DP=615;FS=9.171;HRun=2;HaplotypeScore=75.0196;InbreedingCoeff=0.9988;MQ=76.10;MQ0=0;MQRankSum=-1.753;QD=34.23;ReadPosRankSum=5.187;VQSLOD=4.7497;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:99:0,99,1459	1/1:0,11:11:20.67:272,21,0	0/0:14,0:15:35.51:0,36,432	0/0:14,0:14:21.21:0,21,347	1/1:0,18:18:42.14:545,42,0	0/0:21,0:21:63.18:0,63,900	0/0:28,0:28:84.28:0,84,1251	0/0:24,0:24:69.23:0,69,1016	0/0:22,0:22:66.21:0,66,966	1/1:0,13:13:39.11:490,39,0	1/1:0,14:14:33.11:428,33,0	1/1:0,22:22:54.13:701,54,0	1/1:0,20:20:54.18:701,54,0	1/1:0,19:19:51.17:660,51,0	0/0:25,0:25:72.24:0,72,1077	0/0:22,0:22:66.22:0,66,970	1/1:0,30:30:87.28:1130,87,0	1/1:0,17:17:51.17:662,51,0	0/0:28,0:28:84.23:0,84,1179	0/0:22,0:22:66.20:0,66,950	1/1:0,26:26:75.24:974,75,0	0/0:21,0:21:63.21:0,63,941	1/1:3,21:24:54.15:692,54,0	1/1:0,31:31:87.28:1130,87,0	0/0:25,0:24:69.22:0,69,1012	0/0:22,0:22:66.22:0,66,988	0/0:32,0:32:87.13:0,87,1296	0/0:16,0:16:48.16:0,48,713
chr10	6048455	.	C	CT	16250.81	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-8.973;DP=677;FS=4.488;HRun=2;HaplotypeScore=80.0805;InbreedingCoeff=0.9861;MQ=86.18;MQ0=0;MQRankSum=-4.093;QD=37.79;ReadPosRankSum=3.707;VQSLOD=5.5303;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,43:45:99:1594,111,0	1/1:0,10:10:27.09:389,27,0	0/0:19,0:19:6.51:0,7,460	0/0:30,0:30:78.05:0,78,864	1/1:1,21:22:60.16:841,60,0	0/0:23,0:23:60.17:0,60,731	0/0:27,0:27:81.22:0,81,976	1/1:1,39:40:99:1669,117,0	0/0:17,0:17:45.14:0,45,551	1/1:2,33:35:99:1404,99,0	1/1:0,14:14:39.13:562,39,0	1/1:1,17:18:42.14:605,42,0	1/1:1,22:23:57.19:820,57,0	1/1:2,27:29:75.25:1079,75,0	0/0:28,0:28:81.25:0,81,1001	0/0:18,0:18:54.17:0,54,669	1/1:0,35:35:93.31:1338,93,0	1/1:0,16:16:42.14:605,42,0	0/0:24,0:24:66.17:0,66,802	0/0:17,0:17:51.16:0,51,630	1/1:0,23:23:54.18:778,54,0	0/0:20,0:20:54.15:0,54,656	1/1:2,17:19:45.15:648,45,0	1/1:0,24:24:63.21:907,63,0	0/0:24,0:24:69.22:0,69,855	1/1:1,27:28:78.26:1119,78,0	1/1:2,33:35:99:1418,102,0	1/1:3,11:14:33.11:475,33,0
chr10	6052659	.	C	CACA	25763.23	PASS	AB=0.593;AC=50;AF=0.893;AN=56;BaseQRankSum=0.683;DP=592;FS=0.000;HRun=0;HaplotypeScore=156.1914;InbreedingCoeff=0.6100;MQ=65.19;MQ0=4;MQRankSum=-6.290;QD=45.68;ReadPosRankSum=6.472;VQSLOD=6.2872;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:7,12:21:25.48:225,0,25	1/1:0,6:7:18.05:347,18,0	0/0:11,0:10:26.86:0,27,364	0/0:16,0:15:33.02:0,33,415	1/1:1,14:17:30.10:589,30,0	1/1:0,24:24:54.19:1127,54,0	1/1:1,19:22:60.21:1232,60,0	0/1:5,11:17:26.65:460,0,27	1/1:0,21:23:51.17:1060,51,0	1/1:1,15:18:51.49:970,51,0	1/1:1,14:16:36.12:763,36,0	1/1:0,30:32:81.27:1723,81,0	1/1:0,30:32:78.26:1655,78,0	1/1:0,22:23:51.18:1095,51,0	1/1:0,24:25:66.23:1385,66,0	1/1:1,34:36:99:2110,102,0	1/1:1,26:30:60.18:1253,60,0	1/1:1,16:18:39.13:853,39,0	1/1:1,16:18:54.07:909,54,0	1/1:0,19:21:60.21:1246,60,0	1/1:1,29:30:47.65:994,48,0	1/1:1,13:15:33.11:696,33,0	1/1:0,16:19:42.14:916,42,0	1/1:1,25:31:54.18:1083,54,0	1/1:2,13:16:42.14:864,42,0	1/1:2,13:16:45.13:884,45,0	1/1:4,19:26:50.87:1123,51,0	1/1:0,5:5:9.03:202,9,0
chr10	6054813	.	GCAA	G	15792.12	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=13.679;DP=427;FS=16.540;HRun=0;HaplotypeScore=157.3217;InbreedingCoeff=0.9402;MQ=87.24;MQ0=0;MQRankSum=-13.914;QD=46.31;ReadPosRankSum=3.897;VQSLOD=5.3228;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,126,2913	1/1:0,5:5:15.05:255,15,0	0/0:26,0:26:78.27:0,78,1819	0/0:18,0:18:51.17:0,51,1159	1/1:0,30:30:68.62:1168,69,0	1/1:0,21:21:60.21:1016,60,0	1/1:0,13:13:33.11:558,33,0	1/1:0,15:15:45.15:753,45,0	1/1:0,14:14:36.12:613,36,0	1/1:0,17:17:48.16:818,48,0	1/1:0,16:16:42.14:715,42,0	1/1:0,11:11:33.11:562,33,0	1/1:1,16:17:48.16:818,48,0	1/1:0,18:18:54.18:917,54,0	1/1:3,17:20:54.15:889,54,0	1/1:1,18:19:54.18:920,54,0	1/1:0,5:5:15.05:250,15,0	1/1:0,8:8:24.08:403,24,0	1/1:0,2:2:6.02:102,6,0	1/1:0,17:17:51.17:868,51,0	1/1:2,9:11:27.09:457,27,0	1/1:0,12:12:36.12:613,36,0	1/1:0,16:16:48.16:814,48,0	1/1:4,8:12:14.60:294,15,0	1/1:0,7:8:24.08:407,24,0	1/1:2,12:14:36.12:610,36,0	1/1:1,14:15:42.14:716,42,0	1/1:0,5:5:15.05:256,15,0
chr10	6054902	.	GACACACACACACACACACACACACACAC	G	12718.09	PASS	AB=0.770;AC=34;AF=0.630;AN=54;BaseQRankSum=5.060;DP=437;FS=13.815;HRun=0;HaplotypeScore=295.3263;InbreedingCoeff=0.2064;MQ=44.86;MQ0=22;MQRankSum=-4.431;QD=39.25;ReadPosRankSum=0.074;VQSLOD=1.7671;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:22:15.49:0,15,195	0/1:10,1:13:93.76:500,0,94	0/0:22,0:8:9.03:0,9,174	0/0:19,0:6:6.02:0,6,145	1/1:7,1:27:24.31:690,24,0	1/1:13,3:15:19.82:651,20,0	0/1:16,0:15:99:125,0,214	0/0:21,0:18:14.24:0,14,135	1/1:13,4:16:36.02:828,36,0	0/1:14,1:14:33.25:445,0,33	1/1:8,0:13:6.35:516,6,0	1/1:3,0:8:11.74:346,12,0	1/1:2,0:11:9.03:309,9,0	1/1:8,0:11:1.75:260,2,0	1/1:6,10:17:18.06:961,18,0	1/1:3,8:12:12.04:690,12,0	0/1:11,0:13:50.30:176,0,50	0/0:6,0:5:8.21:0,8,277	1/1:4,6:10:17.91:549,18,0	1/1:18,10:28:54.18:1831,54,0	./.	1/1:5,5:10:3.01:146,3,0	1/1:2,0:11:6.02:230,6,0	0/0:10,0:9:4.91:0,5,21	0/1:3,18:20:99:1592,0,128	0/1:7,0:23:99:1068,0,150	0/1:18,0:21:99:583,0,317	0/1:2,0:3:14.19:221,0,14
chr10	6054924	.	CA	C	812.67	PASS	AB=0.898;AC=17;AF=0.315;AN=54;BaseQRankSum=3.263;DP=411;FS=10.862;HRun=1;HaplotypeScore=143.7123;InbreedingCoeff=-0.3008;MQ=34.80;MQ0=47;MQRankSum=-2.391;QD=4.28;ReadPosRankSum=6.837;VQSLOD=-0.5515;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:21:5.90:0,6,183	0/0:11,0:11:0.75:0,1,106	0/0:23,0:4:12.04:0,12,151	0/0:42,0:4:12.04:0,12,152	0/0:22,2:23:7.21:0,7,187	0/1:7,3:8:24.46:84,0,24	0/1:4,6:9:56.69:119,0,57	0/0:13,0:8:19.65:0,20,218	0/1:13,6:17:99:228,0,108	0/1:13,2:13:57.12:70,0,57	0/0:14,0:14:6.51:0,7,140	0/1:7,2:7:35.26:35,0,61	0/0:9,0:9:1.66:0,2,64	0/1:8,0:8:11.96:12,0,53	0/1:14,0:12:11.85:12,0,30	0/1:9,0:9:3.88:4,0,37	0/1:10,1:11:22.31:22,0,117	0/1:6,0:5:7.53:8,0,59	1/1:8,0:7:10.76:95,11,0	0/1:15,11:25:99:240,0,155	./.	0/0:5,0:5:2.99:0,3,23	0/1:10,0:10:1.34:1,0,30	0/1:8,0:6:0.02:0,0,10	0/0:19,1:18:8.40:0,8,195	0/1:21,0:20:20.85:21,0,144	0/0:22,0:19:17.17:0,17,383	0/1:5,0:4:3.38:3,0,25
chr10	6054926	.	CA	C	829.71	PASS	AB=0.905;AC=21;AF=0.375;AN=56;BaseQRankSum=2.295;DP=418;FS=5.655;HRun=1;HaplotypeScore=146.1537;InbreedingCoeff=-0.2975;MQ=34.40;MQ0=47;MQRankSum=-3.650;QD=3.43;ReadPosRankSum=6.925;VQSLOD=0.2188;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:22:8.19:0,8,218	0/1:8,3:11:42.56:165,0,43	0/0:23,0:3:9.03:0,9,114	0/0:42,0:4:12.04:0,12,152	0/1:23,0:22:27.60:28,0,190	0/1:9,0:7:5.45:5,0,76	0/1:10,0:9:5.97:6,0,88	0/1:13,1:9:17.33:17,0,199	0/1:17,0:15:6.51:7,0,172	0/1:9,6:13:27.61:239,0,28	0/1:10,5:15:63.39:63,0,201	0/1:9,0:7:4.09:4,0,63	0/0:9,0:9:0.87:0,1,66	0/1:5,3:8:55.62:110,0,56	0/1:14,0:12:5.56:6,0,60	0/1:9,0:9:3.33:3,0,57	0/1:10,3:13:87.96:121,0,88	0/1:4,2:5:49.97:50,0,58	1/1:8,0:7:8.51:26,9,0	0/0:28,0:27:13.95:0,14,362	0/0:13,2:7:2.99:0,3,24	0/0:5,0:5:3.01:0,3,33	0/1:9,0:9:2.17:2,0,32	1/1:2,5:5:5.98:60,6,0	0/0:20,0:18:10.05:0,10,260	0/1:21,1:21:63.82:64,0,141	0/1:22,1:20:0.89:1,0,327	0/0:10,0:8:9.35:0,9,192
chr10	6055280	.	TA	T	3962.25	PASS	AB=0.526;AC=7;AF=0.125;AN=56;BaseQRankSum=2.213;DP=744;FS=2.219;HRun=2;HaplotypeScore=93.2986;InbreedingCoeff=0.8366;MQ=84.80;MQ0=0;MQRankSum=-0.233;QD=34.45;ReadPosRankSum=-0.832;VQSLOD=3.4129;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,132,1904	0/0:12,0:12:36.12:0,36,539	0/0:21,0:21:60.19:0,60,874	0/0:25,0:25:66.18:0,66,971	0/0:28,0:28:78.26:0,78,1165	0/0:23,0:23:69.22:0,69,1014	0/0:20,0:20:60.20:0,60,899	1/1:1,29:30:84.25:1061,84,0	0/0:33,0:33:99:0,99,1481	0/0:36,0:36:99:0,108,1583	0/0:15,0:15:45.15:0,45,673	0/0:35,0:35:99:0,105,1554	0/0:21,0:21:63.21:0,63,940	0/0:34,0:34:99:0,102,1526	0/0:36,0:36:99:0,108,1610	0/0:27,0:27:81.27:0,81,1213	0/0:19,0:19:57.19:0,57,853	0/0:19,0:19:57.19:0,57,854	0/0:31,0:31:87.28:0,87,1261	0/0:24,0:24:72.24:0,72,1061	0/0:48,0:48:99:0,141,2113	0/0:14,0:14:42.14:0,42,630	0/0:17,0:17:48.16:0,48,719	0/0:24,0:24:72.24:0,72,1079	0/0:23,0:23:69.23:0,69,1017	0/1:4,37:41:56.52:1305,0,57	1/1:0,30:30:87.28:1130,87,0	1/1:0,14:14:36.12:467,36,0
chr10	6055927	.	T	TTGTGTG	4248.35	PASS	AB=0.929;AC=43;AF=0.827;AN=52;BaseQRankSum=-1.265;DP=732;FS=1.544;HRun=0;HaplotypeScore=200.4038;InbreedingCoeff=0.4064;MQ=61.00;MQ0=22;MQRankSum=-1.959;QD=7.47;ReadPosRankSum=-0.694;VQSLOD=3.9690;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:41:7.02:0,7,121	1/1:11,0:11:9.01:186,9,0	./.	0/0:40,0:24:2.92:0,3,32	1/1:18,1:27:8.92:173,9,0	0/1:23,0:24:33.43:94,0,33	1/1:40,0:38:12:163,12,0	1/1:31,0:31:18.53:324,19,0	1/1:26,0:25:3.01:33,3,0	1/1:16,1:26:24.08:558,24,0	0/1:16,4:22:0.01:0,0,0	0/0:19,0:26:7.77:0,8,90	1/1:24,0:32:12.76:301,13,0	1/1:20,7:26:12.03:317,12,0	0/1:25,0:25:0.01:0,0,0	1/1:22,0:22:5.64:155,6,0	1/1:15,0:15:3.01:78,3,0	1/1:16,0:29:12.51:192,13,0	1/1:31,0:31:9.92:241,10,0	1/1:20,0:19:6.01:146,6,0	1/1:19,1:26:2.74:38,3,0	1/1:24,0:24:2.73:75,3,0	1/1:14,7:22:4.34:190,4,0	1/1:22,1:36:14.83:224,15,0	./.	1/1:23,0:22:15:250,15,0	1/1:19,0:19:12.04:343,12,0	1/1:7,0:7:6.02:169,6,0
chr10	6055961	.	G	GTGTGTC	5121.07	PASS	AB=0.932;AC=34;AF=0.607;AN=56;BaseQRankSum=-0.533;DP=673;FS=0.000;HRun=0;HaplotypeScore=158.0841;InbreedingCoeff=0.0687;MQ=57.45;MQ0=15;MQRankSum=-0.104;QD=9.47;ReadPosRankSum=2.527;VQSLOD=3.4925;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:52.52:0,53,485	0/1:7,0:7:17.48:37,0,17	0/0:24,0:17:31.42:0,31,390	0/0:33,0:17:50.98:0,51,493	0/1:30,0:28:89.61:90,0,153	0/1:9,0:26:12.38:76,0,12	1/1:26,0:25:29.88:304,30,0	0/1:27,0:27:9.92:433,0,10	1/1:24,0:23:4.85:173,5,0	0/1:25,0:25:99:255,0,247	0/0:19,0:19:14.97:0,15,122	0/0:20,0:20:38.47:0,38,366	0/1:27,0:27:97.27:97,0,162	0/1:31,0:28:99:205,0,156	1/1:27,0:27:19.94:275,20,0	1/1:14,0:30:6.02:168,6,0	0/1:4,0:14:13.95:78,0,14	0/1:25,0:24:47.80:48,0,98	1/1:21,0:21:5.53:270,6,0	1/1:11,0:22:14.77:232,15,0	0/1:21,0:21:10.73:11,0,76	1/1:9,1:27:14.13:131,14,0	0/1:19,0:19:98.21:135,0,98	0/1:31,0:31:99:113,0,200	1/1:20,0:20:35.93:295,36,0	1/1:7,21:29:60.02:967,60,0	1/1:5,15:23:21.29:556,21,0	1/1:4,1:5:11.95:170,12,0
chr10	6057688	.	T	TG	13808.09	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-19.373;DP=764;FS=3.915;HRun=2;HaplotypeScore=81.2639;InbreedingCoeff=1.0000;MQ=93.96;MQ0=0;MQRankSum=-4.158;QD=38.68;ReadPosRankSum=0.297;VQSLOD=5.2409;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,129,1583	0/0:18,0:18:54.17:0,54,669	0/0:31,0:31:81.24:0,81,991	0/0:38,0:38:99:0,108,1303	0/0:36,0:36:96.30:0,96,1188	1/1:0,18:18:54.18:778,54,0	1/1:2,18:20:54.18:778,54,0	1/1:3,32:35:99:1401,99,0	1/1:2,27:29:72.24:1036,72,0	0/0:25,0:25:72.23:0,72,893	0/0:27,0:27:75.23:0,75,918	0/0:27,0:27:78.24:0,78,967	0/0:36,0:36:99:0,102,1225	0/0:24,0:24:69.22:0,69,855	1/1:1,34:35:96.32:1382,96,0	1/1:0,25:25:72.24:1036,72,0	1/1:0,21:21:54.18:778,54,0	0/0:16,0:16:48.15:0,48,595	1/1:2,17:19:51.16:713,51,0	1/1:1,25:26:72.24:1037,72,0	0/0:41,0:41:99:0,120,1472	1/1:3,26:29:72.24:1035,72,0	0/0:16,0:16:45.11:0,45,540	0/0:29,0:29:87.26:0,87,1065	1/1:1,29:30:72.24:1036,72,0	1/1:2,30:32:87.29:1249,87,0	1/1:0,27:27:75.25:1080,75,0	1/1:0,11:11:33.11:471,33,0
chr10	6057967	.	GCA	G	3103.47	PASS	AB=0.836;AC=31;AF=0.574;AN=54;BaseQRankSum=0.001;DP=721;FS=10.976;HRun=0;HaplotypeScore=178.9065;InbreedingCoeff=0.4094;MQ=62.20;MQ0=9;MQRankSum=-0.022;QD=6.90;ReadPosRankSum=2.156;VQSLOD=2.8220;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:43,3:45:11.60:12,0,575	1/1:1,5:7:17.62:157,18,0	./.	0/0:33,0:22:0.47:0,0,1	1/1:17,9:29:26.32:215,26,0	0/0:9,0:22:14.99:0,15,129	0/0:34,0:37:31.12:0,31,333	0/1:14,0:14:4.71:5,0,61	0/0:24,0:38:20.52:0,21,199	1/1:20,7:29:20.72:192,21,0	1/1:9,8:17:15.04:164,15,0	1/1:16,6:22:17.94:180,18,0	0/1:12,10:23:17.96:207,0,18	1/1:22,11:35:35.76:356,36,0	0/0:21,0:44:50.99:0,51,445	0/1:22,3:28:23.57:24,0,455	0/0:13,0:22:18.01:0,18,185	1/1:13,8:22:29.74:291,30,0	1/1:11,2:12:6.02:66,6,0	0/1:22,3:25:23.56:24,0,491	1/1:30,6:35:17.88:178,18,0	0/0:22,2:24:0.20:0,0,317	0/1:14,8:22:1.92:176,0,2	1/1:16,16:31:39:427,39,0	0/0:19,0:30:6:0,6,51	0/1:12,2:16:71.44:76,0,71	1/1:13,10:24:32.92:342,33,0	1/1:2,6:8:18.05:197,18,0
chr10	6060822	.	G	GA	17151.88	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=6.350;DP=762;FS=1.165;HRun=1;HaplotypeScore=93.3096;InbreedingCoeff=0.9998;MQ=80.46;MQ0=0;MQRankSum=-4.866;QD=43.53;ReadPosRankSum=0.731;VQSLOD=4.6601;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,120,1654	0/0:9,0:9:27.09:0,27,377	0/0:35,0:36:99:0,102,1331	0/0:27,0:27:73.48:0,73,990	0/0:19,0:19:57.17:0,57,766	1/1:0,26:26:78.27:1247,78,0	1/1:0,35:35:90.31:1439,90,0	1/1:0,35:35:99:1519,102,0	1/1:0,20:20:54.18:863,54,0	0/0:17,0:17:48.15:0,48,645	0/0:17,0:17:48.16:0,48,671	0/0:30,0:30:90.29:0,90,1238	0/0:34,0:34:99:0,99,1343	0/0:33,0:33:96.32:0,96,1343	1/1:0,39:39:99:1871,117,0	1/1:0,27:27:78.27:1247,78,0	1/1:0,27:27:69.24:1103,69,0	0/0:23,0:23:69.23:0,69,969	1/1:3,33:36:99:1672,108,0	1/1:1,29:30:72.25:1151,72,0	0/0:40,0:40:99:0,117,1614	1/1:0,19:19:48.16:767,48,0	0/0:18,0:18:38.87:0,39,544	0/0:25,0:25:75.25:0,75,1049	1/1:1,22:23:54.18:863,54,0	1/1:1,25:26:36.27:1112,36,0	1/1:0,41:41:99:1820,114,0	1/1:0,10:10:30.10:479,30,0
chr10	6062905	.	A	AT	11705.21	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-6.329;DP=593;FS=3.126;HRun=2;HaplotypeScore=84.9793;InbreedingCoeff=0.9998;MQ=86.59;MQ0=0;MQRankSum=-1.086;QD=38.38;ReadPosRankSum=1.177;VQSLOD=5.4318;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:63.18:0,63,765	0/0:9,0:9:27.08:0,27,334	0/0:21,0:20:57.11:0,57,658	0/0:23,0:24:54.31:0,54,578	0/0:28,0:28:75.24:0,75,928	1/1:1,38:39:99:1425,99,0	1/1:3,15:18:42.14:605,42,0	1/1:5,23:28:72.23:1006,72,0	1/1:0,24:24:69.23:993,69,0	0/0:30,0:30:87.26:0,87,1062	0/0:17,0:17:39.12:0,39,483	0/0:23,0:23:66.18:0,66,793	0/0:27,0:27:81.25:0,81,1003	0/0:18,0:18:51.16:0,51,631	1/1:1,23:24:66.22:950,66,0	1/1:0,17:17:45.15:648,45,0	1/1:1,21:22:60.20:864,60,0	0/0:15,0:15:36.11:0,36,446	1/1:1,16:16:51.12:691,51,0	1/1:2,21:23:57.19:815,57,0	0/0:15,0:15:42.12:0,42,508	1/1:1,18:19:45.15:646,45,0	0/0:20,0:20:51.16:0,51,631	0/0:16,0:16:39.08:0,39,466	1/1:0,14:14:36.12:517,36,0	1/1:0,23:23:69.23:991,69,0	1/1:0,22:22:63.21:906,63,0	1/1:0,15:15:45.15:648,45,0
chr10	6063023	.	TAA	T	8925.36	PASS	AC=26;AF=0.481;AN=54;BaseQRankSum=5.364;DP=552;FS=5.791;HRun=9;HaplotypeScore=76.5098;InbreedingCoeff=0.9983;MQ=70.87;MQ0=1;MQRankSum=-1.262;QD=28.98;ReadPosRankSum=3.160;VQSLOD=5.0572;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:57.15:0,57,895	0/0:13,0:13:33.08:0,33,513	0/0:20,0:20:39.08:0,39,702	0/0:14,0:14:19.83:0,20,450	0/0:22,0:22:57.18:0,57,907	1/1:1,20:21:60.18:699,60,0	1/1:3,19:22:51.15:594,51,0	1/1:2,22:24:66.19:768,66,0	1/1:1,18:19:48.11:545,48,0	0/0:18,0:18:45.15:0,45,718	0/0:20,0:20:54.18:0,54,875	0/0:17,0:17:42.13:0,42,667	0/0:13,0:13:36.12:0,36,589	0/0:16,0:16:42.14:0,42,668	1/1:2,21:23:60.14:685,60,0	1/1:6,14:20:36.09:419,36,0	1/1:2,23:24:57.14:650,57,0	0/0:23,0:23:66.23:0,66,1081	1/1:5,16:21:51.14:594,51,0	1/1:1,37:38:99:1224,105,0	0/0:9,0:9:21.07:0,21,345	1/1:1,16:17:39.10:454,39,0	0/0:28,0:28:75.22:0,75,1188	0/0:9,0:9:24.04:0,24,364	1/1:1,24:25:69.17:790,69,0	1/1:2,20:22:57.16:664,57,0	1/1:1,30:31:72.21:839,72,0	./.
chr10	6063146	.	T	TGTCCTAGGTCA	14424.41	PASS	AB=0.778;AC=55;AF=0.982;AN=56;BaseQRankSum=1.035;DP=245;FS=26.534;HRun=0;HaplotypeScore=287.7079;InbreedingCoeff=-0.0643;MQ=63.90;MQ0=0;MQRankSum=-2.255;QD=58.88;ReadPosRankSum=1.601;VQSLOD=3.3595;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,0:11:24.06:871,24,0	1/1:0,0:2:6.02:194,6,0	1/1:3,0:5:9.03:309,9,0	0/1:5,1:7:21.98:352,0,22	1/1:0,0:12:17.55:485,18,0	1/1:2,0:13:33.11:1177,33,0	1/1:3,0:16:26.08:783,26,0	1/1:2,0:12:30.10:938,30,0	1/1:1,0:16:36.12:1385,36,0	1/1:0,0:14:22.63:855,23,0	1/1:1,0:7:3.01:49,3,0	1/1:3,0:8:12.01:312,12,0	1/1:1,0:8:12.04:562,12,0	1/1:0,0:9:9.50:388,10,0	1/1:2,0:11:18.06:798,18,0	1/1:1,0:9:9.50:336,10,0	1/1:0,0:2:3.01:123,3,0	1/1:1,0:4:6.02:268,6,0	1/1:1,0:4:9.03:272,9,0	1/1:2,0:9:9.03:334,9,0	1/1:1,0:6:9.01:296,9,0	1/1:0,0:8:12.04:460,12,0	1/1:3,0:12:13.29:376,13,0	1/1:0,0:5:6.02:243,6,0	1/1:0,0:9:12.04:539,12,0	1/1:2,0:11:15.05:570,15,0	1/1:0,0:10:21.03:808,21,0	1/1:1,0:4:9.03:344,9,0
chr10	6083985	.	G	GACC	3599.30	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-6.190;DP=559;FS=4.843;HRun=0;HaplotypeScore=76.8018;InbreedingCoeff=0.9693;MQ=72.19;MQ0=2;MQRankSum=-4.347;QD=54.53;ReadPosRankSum=-3.135;VQSLOD=4.9648;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,102,1649	0/0:8,0:8:24.04:0,24,370	0/0:27,0:24:57.16:0,57,887	0/0:15,0:12:33.11:0,33,546	0/0:28,0:28:54.43:0,54,1041	0/0:18,0:18:54.18:0,54,899	0/0:33,0:33:96.24:0,96,1535	1/1:7,21:29:75.10:1467,75,0	0/0:16,0:16:45.15:0,45,750	0/0:27,0:27:81.27:0,81,1325	0/0:15,0:15:45.15:0,45,748	0/0:19,0:19:54.18:0,54,899	0/0:14,0:14:30.10:0,30,500	0/0:25,0:25:72.25:0,72,1199	0/0:18,0:18:51.17:0,51,850	0/0:17,0:17:42.14:0,42,700	0/0:31,0:30:90.31:0,90,1488	0/0:20,0:20:60.21:0,60,998	0/0:18,0:18:51.17:0,51,833	0/0:17,0:17:45.15:0,45,750	0/0:21,0:21:63.22:0,63,1045	0/0:14,0:14:42.14:0,42,696	0/0:14,0:14:42.14:0,42,700	0/0:19,0:19:57.19:0,57,949	0/0:19,0:19:42.14:0,42,700	1/1:5,16:21:54.19:1210,54,0	1/1:3,10:13:36.12:786,36,0	1/1:2,1:3:6.02:136,6,0
chr10	6084068	.	G	GAAA	11384.97	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-1.735;DP=562;FS=6.514;HRun=11;HaplotypeScore=83.8469;InbreedingCoeff=0.7396;MQ=54.28;MQ0=5;MQRankSum=-1.950;QD=20.81;ReadPosRankSum=2.204;VQSLOD=3.3751;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,0:33:32.22:72,32,0	1/1:2,7:10:15.52:270,16,0	0/0:6,0:3:9.03:0,9,101	0/0:9,0:4:2.18:0,2,64	1/1:4,17:23:35.96:482,36,0	1/1:4,16:19:36.12:677,36,0	1/1:7,22:30:45.15:806,45,0	1/1:20,2:32:22.23:446,22,0	1/1:4,12:19:30.99:539,31,0	1/1:8,13:23:35.84:509,36,0	1/1:6,11:17:27:434,27,0	1/1:5,13:18:20.90:353,21,0	1/1:3,9:15:6.02:113,6,0	1/1:7,14:22:15.03:249,15,0	1/1:2,10:17:33.07:514,33,0	1/1:2,11:16:30.10:523,30,0	1/1:5,20:30:60.16:1021,60,0	1/1:4,16:23:45.13:786,45,0	1/1:13,13:27:45.08:663,45,0	1/1:7,10:17:24.01:363,24,0	1/1:4,12:17:15.03:249,15,0	1/1:5,4:11:16.24:216,16,0	1/1:3,12:16:8.06:102,8,0	1/1:4,18:23:30.10:551,30,0	1/1:6,21:31:45.52:673,46,0	1/1:11,0:19:38.84:312,39,0	1/1:8,0:21:40.87:295,41,0	1/1:0,0:9:23.42:167,23,0
chr10	6084331	.	GTT	G	2324.42	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=12.873;DP=790;FS=1.028;HRun=3;HaplotypeScore=177.0790;InbreedingCoeff=0.9830;MQ=81.93;MQ0=0;MQRankSum=-11.194;QD=27.35;ReadPosRankSum=1.303;VQSLOD=2.7109;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,135,2471	0/0:11,0:11:30.10:0,30,580	0/0:31,0:31:78.26:0,78,1444	0/0:16,0:16:26.19:0,26,665	0/0:27,0:27:78.21:0,78,1468	0/0:18,0:18:54.19:0,54,1043	0/0:37,0:37:99:0,108,2016	1/1:14,15:29:51.09:683,51,0	0/0:33,0:33:96.32:0,96,1822	0/0:37,0:37:99:0,108,1991	0/0:23,0:23:66.23:0,66,1275	0/0:47,0:47:99:0,138,2664	0/0:40,0:40:99:0,120,2287	0/0:32,0:32:96.33:0,96,1854	0/0:32,0:32:96.32:0,96,1817	0/0:39,0:39:99:0,117,2194	0/0:34,0:34:99:0,99,1879	0/0:24,0:24:72.25:0,72,1391	0/0:21,0:21:63.22:0,63,1202	0/0:11,0:11:33.11:0,33,637	0/0:38,0:38:99:0,111,2078	0/0:19,0:19:51.17:0,51,954	0/0:27,0:27:78.22:0,78,1433	0/0:40,0:39:99:0,120,2281	0/0:23,0:23:69.24:0,69,1333	1/1:10,19:29:66.13:920,66,0	1/1:7,17:24:54.11:746,54,0	1/1:0,3:3:9.03:131,9,0
chr10	6084332	.	T	TG	949.60	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=12.506;DP=769;FS=0.492;HRun=1;HaplotypeScore=163.3482;InbreedingCoeff=0.9825;MQ=81.96;MQ0=0;MQRankSum=-10.626;QD=15.32;ReadPosRankSum=1.377;VQSLOD=3.7036;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,135,1822	0/0:11,0:11:30.10:0,30,420	0/0:30,0:30:78.19:0,78,1040	0/0:15,0:15:41.92:0,42,527	0/0:27,0:27:78.22:0,78,1069	0/0:19,0:19:54.18:0,54,755	0/0:36,0:36:99:0,108,1458	1/1:15,3:18:49.85:335,50,0	0/0:32,0:32:96.30:0,96,1319	0/0:38,0:38:99:0,108,1462	0/0:23,0:23:66.22:0,66,923	0/0:46,0:46:99:0,138,1927	0/0:41,0:41:99:0,120,1660	0/0:33,0:33:96.32:0,96,1341	0/0:32,0:32:96.31:0,96,1320	0/0:39,0:39:99:0,117,1591	0/0:34,0:34:99:0,99,1365	0/0:27,0:27:73.13:0,73,1010	0/0:22,0:22:63.19:0,63,850	0/0:12,0:12:33.11:0,33,460	0/0:37,0:37:99:0,111,1517	0/0:19,0:19:51.16:0,51,698	0/0:26,0:26:78.21:0,78,1050	0/0:40,0:39:99:0,120,1658	0/0:23,0:23:69.23:0,69,965	1/1:20,3:23:63.86:390,64,0	1/1:18,0:18:52.32:328,52,0	1/1:3,0:3:8.77:52,9,0
chr10	6084338	.	AC	A	1202.62	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=12.256;DP=775;FS=1.725;HRun=1;HaplotypeScore=156.7095;InbreedingCoeff=0.9833;MQ=84.69;MQ0=0;MQRankSum=-12.078;QD=21.87;ReadPosRankSum=3.436;VQSLOD=3.9272;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,129,2011	0/0:12,0:12:36.12:0,36,573	0/0:33,0:33:96.30:0,96,1484	0/0:18,0:18:54.18:0,54,839	0/0:28,0:28:84.25:0,84,1282	0/0:20,0:20:60.20:0,60,936	0/0:35,0:35:99:0,105,1671	1/1:0,15:15:41.97:356,42,0	0/0:31,0:31:93.30:0,93,1464	0/0:36,0:36:99:0,102,1605	0/0:25,0:25:72.25:0,72,1148	0/0:47,0:47:99:0,141,2235	0/0:42,0:42:99:0,126,1987	0/0:33,0:33:99:0,99,1575	0/0:33,0:33:99:0,99,1583	0/0:34,0:34:99:0,102,1603	0/0:39,0:39:99:0,111,1746	0/0:31,0:31:90.31:0,90,1439	0/0:22,0:22:66.22:0,66,1041	0/0:11,0:11:33.11:0,33,527	0/0:38,0:38:99:0,114,1822	0/0:21,0:21:60.18:0,60,910	0/0:26,0:26:78.27:0,78,1241	0/0:39,0:38:99:0,117,1871	0/0:23,0:23:69.24:0,69,1098	1/1:1,19:20:59.92:499,60,0	1/1:0,17:17:50.90:429,51,0	1/1:0,3:3:8.98:74,9,0
chr10	6084344	.	CTG	C	1632.30	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=12.259;DP=782;FS=0.517;HRun=0;HaplotypeScore=169.2030;InbreedingCoeff=0.9480;MQ=84.48;MQ0=0;MQRankSum=-12.078;QD=29.15;ReadPosRankSum=2.878;VQSLOD=5.1264;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,126,2400	0/0:12,0:12:36.12:0,36,695	0/0:32,0:32:93.27:0,93,1543	0/0:20,0:20:57.11:0,57,959	0/0:25,0:25:75.26:0,75,1429	0/0:17,0:17:51.17:0,51,978	0/0:40,0:40:99:0,120,2218	1/1:0,15:15:42.12:470,42,0	0/0:32,0:32:96.32:0,96,1820	0/0:36,0:36:99:0,105,2022	0/0:23,0:23:66.23:0,66,1264	0/0:48,0:48:99:0,138,2587	0/0:42,0:42:99:0,126,2409	0/0:35,0:35:99:0,99,1889	0/0:35,0:35:99:0,102,1935	0/0:37,0:37:99:0,111,2088	0/0:37,0:37:99:0,105,2026	0/0:31,0:31:93.30:0,93,1758	0/0:20,0:20:60.18:0,60,1080	0/0:12,0:12:36.11:0,36,662	0/0:41,0:41:99:0,114,2139	0/0:20,0:20:57.18:0,57,1063	0/0:26,0:26:66.23:0,66,1274	0/0:40,0:39:99:0,114,2201	0/0:23,0:23:69.22:0,69,1283	1/1:1,20:21:5.20:617,5,0	1/1:0,17:17:51.14:592,51,0	1/1:0,3:3:9.02:102,9,0
chr10	6084733	.	AT	A	3214.03	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=12.160;DP=791;FS=7.355;HRun=3;HaplotypeScore=82.8677;InbreedingCoeff=1.0000;MQ=84.95;MQ0=0;MQRankSum=-2.446;QD=32.80;ReadPosRankSum=-1.162;VQSLOD=3.2922;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,141,2012	0/0:18,0:18:54.18:0,54,778	0/0:23,0:23:62.76:0,63,830	0/0:28,0:28:75.23:0,75,1034	0/0:34,0:34:99:0,102,1468	0/0:22,0:22:60.18:0,60,827	0/0:29,0:29:87.25:0,87,1198	1/1:0,26:26:78.22:940,78,0	0/0:21,0:21:63.21:0,63,906	0/0:29,0:29:87.29:0,87,1237	0/0:23,0:23:66.22:0,66,945	0/0:27,0:27:78.25:0,78,1104	0/0:37,0:37:99:0,111,1555	0/0:29,0:29:81.25:0,81,1129	0/0:42,0:42:99:0,123,1739	0/0:21,0:21:63.21:0,63,902	0/0:25,0:24:75.24:0,75,1063	0/0:21,0:21:57.18:0,57,802	0/0:25,0:25:75.24:0,75,1064	0/0:20,0:20:54.18:0,54,778	0/0:57,0:57:99:0,163,2295	0/0:20,0:20:54.18:0,54,775	0/0:25,0:25:72.22:0,72,1018	0/0:47,0:47:99:0,141,2011	0/0:23,0:23:66.19:0,66,902	1/1:1,40:41:80.17:1431,80,0	1/1:1,14:15:36.11:446,36,0	1/1:0,16:16:45.14:558,45,0
chr10	6085268	.	CTT	C	4188.75	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=13.834;DP=695;FS=1.789;HRun=4;HaplotypeScore=88.8117;InbreedingCoeff=0.9997;MQ=80.35;MQ0=1;MQRankSum=-3.005;QD=41.47;ReadPosRankSum=-1.355;VQSLOD=2.7108;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:75.21:0,75,1367	0/0:13,0:13:36.11:0,36,616	0/0:24,0:24:66.21:0,66,1189	0/0:11,0:11:30.07:0,30,495	0/0:31,0:31:90.31:0,90,1680	0/0:28,0:28:84.29:0,84,1552	0/0:25,0:25:75.26:0,75,1405	1/1:0,37:37:99:1533,111,0	0/0:17,0:17:51.17:0,51,955	0/0:37,0:37:99:0,111,2075	0/0:27,0:27:78.26:0,78,1428	0/0:14,0:14:42.10:0,42,750	0/0:27,0:27:78.27:0,78,1461	0/0:35,0:35:96.32:0,96,1765	0/0:26,0:26:75.26:0,75,1399	0/0:27,0:27:81.27:0,81,1488	0/0:30,0:30:81.26:0,81,1470	0/0:16,0:16:45.15:0,45,827	0/0:32,0:32:96.30:0,96,1760	0/0:32,0:32:93.32:0,93,1737	0/0:22,0:22:63.22:0,63,1167	0/0:27,0:27:81.27:0,81,1465	0/0:24,0:24:69.22:0,69,1231	0/0:20,0:20:57.20:0,57,1055	0/0:24,0:24:72.25:0,72,1349	1/1:0,22:21:63.19:889,63,0	1/1:0,30:30:87.29:1281,87,0	1/1:0,12:12:33.11:486,33,0
chr10	6087900	.	AC	A	7262.64	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=19.735;DP=707;FS=2.118;HRun=5;HaplotypeScore=119.0301;InbreedingCoeff=0.9986;MQ=92.60;MQ0=0;MQRankSum=-3.151;QD=28.48;ReadPosRankSum=3.553;VQSLOD=4.0280;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,108,1466	1/1:1,10:11:27.08:306,27,0	0/0:26,0:26:72.22:0,72,960	0/0:34,0:34:93.27:0,93,1225	1/1:1,17:18:48.10:531,48,0	0/0:24,0:24:69.21:0,69,926	0/0:22,0:22:60.16:0,60,798	0/0:33,0:33:87.27:0,87,1159	0/0:31,0:31:87.21:0,87,1122	1/1:1,25:26:75.21:850,75,0	1/1:1,16:17:39.03:425,39,0	1/1:3,30:33:90.21:1006,90,0	1/1:2,33:35:93.14:1011,93,0	1/1:5,35:40:99:1195,108,0	0/0:44,0:44:99:0,126,1703	0/0:26,0:26:72.20:0,72,962	0/0:23,0:23:60.17:0,60,797	1/1:0,11:11:33.09:374,33,0	0/0:23,0:23:66.13:0,66,849	0/0:27,0:27:78.21:0,78,1028	1/1:2,28:30:75.21:850,75,0	0/0:32,0:32:90.30:0,90,1223	1/1:1,10:11:21.06:238,21,0	1/1:6,17:23:42.12:476,42,0	0/0:18,0:18:45.05:0,45,558	0/0:26,0:26:75.24:0,75,1008	0/0:20,0:20:60.19:0,60,805	0/0:7,0:7:21.07:0,21,287
chr10	6088315	.	GA	G	4813.69	PASS	AB=0.928;AC=24;AF=0.429;AN=56;BaseQRankSum=12.809;DP=583;FS=1.925;HRun=10;HaplotypeScore=60.9210;InbreedingCoeff=0.8474;MQ=79.05;MQ0=0;MQRankSum=0.115;QD=18.59;ReadPosRankSum=2.438;VQSLOD=5.8037;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:55.40:0,55,818	1/1:1,4:5:12:104,12,0	0/1:17,2:18:62.46:80,0,62	0/1:17,1:17:26.29:26,0,222	1/1:3,26:29:68.81:580,69,0	0/0:21,1:22:34.08:0,34,587	0/0:19,0:19:51.14:0,51,564	0/0:23,0:23:48.11:0,48,515	0/0:16,1:17:16.05:0,16,397	1/1:3,21:24:62.79:528,63,0	1/1:1,19:21:53.02:449,53,0	1/1:0,20:20:50.99:443,51,0	1/1:5,25:30:68.98:599,69,0	1/1:2,17:19:41.99:365,42,0	0/0:16,0:16:45.09:0,45,475	0/0:21,0:21:57.15:0,57,631	0/0:25,0:25:57.10:0,57,601	1/1:1,19:20:53.99:469,54,0	0/0:20,0:20:29.75:0,30,511	0/0:18,0:20:47.96:0,48,512	1/1:2,21:23:59.98:521,60,0	0/0:11,0:11:27.06:0,27,292	1/1:1,10:11:26.99:234,27,0	1/1:1,18:19:47.99:417,48,0	0/0:22,0:22:66.13:0,66,710	0/0:27,1:29:33.94:0,34,585	0/0:32,0:32:84.19:0,84,904	0/0:16,0:16:22.66:0,23,425
chr10	6090713	.	TG	T	9686.06	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=13.542;DP=670;FS=6.463;HRun=3;HaplotypeScore=66.7909;InbreedingCoeff=1.0000;MQ=87.28;MQ0=0;MQRankSum=-0.548;QD=36.41;ReadPosRankSum=3.596;VQSLOD=5.4750;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:84.28:0,84,1257	1/1:0,14:14:39.13:506,39,0	0/0:25,0:25:72.24:0,72,1046	0/0:25,0:25:67.02:0,67,932	1/1:1,29:30:90.29:1163,90,0	0/0:21,0:21:60.19:0,60,878	0/0:20,0:20:60.20:0,60,886	0/0:34,0:34:99:0,102,1490	0/0:28,0:28:84.26:0,84,1221	1/1:1,25:26:71.97:932,72,0	1/1:0,14:14:42.14:545,42,0	1/1:0,26:26:72.23:935,72,0	1/1:0,27:27:78.25:1012,78,0	1/1:0,34:34:90.29:1169,90,0	0/0:28,0:28:84.28:0,84,1259	0/0:17,0:17:51.17:0,51,754	0/0:24,0:24:72.24:0,72,1079	1/1:0,13:13:36.12:467,36,0	0/0:20,0:20:60.20:0,60,893	0/0:16,0:16:48.16:0,48,717	1/1:0,31:31:90.29:1169,90,0	0/0:19,0:19:57.17:0,57,812	1/1:0,20:20:57.18:736,57,0	1/1:0,31:31:81.26:1052,81,0	0/0:23,0:23:69.23:0,69,1024	0/0:33,0:33:70.53:0,71,1327	0/0:26,0:26:75.24:0,75,1102	0/0:16,0:16:48.16:0,48,719
chr10	6091002	.	A	AAC	35718.58	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-5.877;DP=780;FS=5.557;HRun=0;HaplotypeScore=87.3515;InbreedingCoeff=0.9993;MQ=81.59;MQ0=1;MQRankSum=-9.560;QD=48.27;ReadPosRankSum=5.006;VQSLOD=5.8713;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,28:31:72.25:1320,72,0	1/1:1,9:12:27.09:495,27,0	0/0:23,0:23:54.14:0,54,738	0/0:17,0:17:42.14:0,42,587	1/1:5,32:37:99:1893,105,0	1/1:1,34:35:90.31:1650,90,0	1/1:3,16:19:45.15:825,45,0	1/1:6,34:40:99:1861,102,0	1/1:0,28:28:81.28:1484,81,0	1/1:0,38:39:99:2080,117,0	1/1:0,13:13:36.12:655,36,0	1/1:0,29:29:78.27:1430,78,0	1/1:0,21:21:63.22:1155,63,0	1/1:0,26:27:75.26:1371,75,0	1/1:1,29:30:75.26:1375,75,0	1/1:2,28:31:81.28:1485,81,0	1/1:0,25:25:75.26:1375,75,0	1/1:2,15:18:39.13:713,39,0	1/1:4,20:25:69.21:1198,69,0	1/1:2,35:37:99:1795,99,0	1/1:1,37:39:96.33:1760,96,0	1/1:2,18:20:51.17:935,51,0	1/1:3,31:34:90.31:1649,90,0	1/1:2,27:29:72.25:1320,72,0	1/1:3,23:26:66.23:1210,66,0	1/1:3,36:38:99:1882,105,0	1/1:3,29:32:81.28:1483,81,0	1/1:0,24:24:72.25:1319,72,0
chr10	6092293	.	A	ACCCAACTGGGCGATG	29975.81	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-1.204;DP=602;FS=76.735;HRun=0;HaplotypeScore=240.3652;InbreedingCoeff=0.9861;MQ=78.40;MQ0=0;MQRankSum=-16.886;QD=128.65;ReadPosRankSum=1.742;VQSLOD=2.1478;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:25,11:36:90.27:5772,90,0	1/1:7,3:11:27.09:1938,27,0	0/0:20,0:20:51.06:0,51,1719	0/0:17,0:17:36.09:0,36,1205	1/1:13,16:31:33.07:2194,33,0	0/0:25,0:25:75.26:0,75,2842	0/0:28,0:28:78.25:0,78,3158	0/0:27,0:26:63.21:0,63,2168	0/0:23,0:23:60.19:0,60,2437	1/1:8,13:25:72.23:4090,72,0	1/1:11,4:18:36.12:2267,36,0	1/1:5,7:14:30.10:1956,30,0	1/1:8,9:19:48.16:3094,48,0	1/1:6,7:17:36.12:2465,36,0	0/0:23,0:23:66.23:0,66,2502	0/0:19,0:19:57.20:0,57,2341	0/0:31,0:31:89.67:0,90,3497	1/1:3,2:9:12.04:768,12,0	0/0:23,0:22:60.21:0,60,2389	0/0:26,0:26:75.26:0,75,3120	1/1:8,1:12:9.03:642,9,0	0/0:33,0:33:99:0,99,3753	1/1:9,9:21:41.73:2735,42,0	1/1:13,5:20:30.10:2056,30,0	0/0:25,0:25:69.24:0,69,2740	0/0:25,0:25:69.24:0,69,2818	0/0:18,0:18:51.16:0,51,2032	0/0:6,0:6:18.06:0,18,772
chr10	6092392	.	G	GGAA	5134.65	PASS	AB=0.895;AC=15;AF=0.278;AN=54;BaseQRankSum=12.992;DP=719;FS=17.653;HRun=0;HaplotypeScore=262.5540;InbreedingCoeff=0.5629;MQ=60.47;MQ0=10;MQRankSum=-12.603;QD=22.62;ReadPosRankSum=-0.379;VQSLOD=3.4345;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:30.10:0,30,461	1/1:9,8:17:14.85:504,15,0	0/0:50,0:26:29.87:0,30,745	0/0:61,0:46:75.74:0,76,1140	0/1:28,8:35:13.52:469,0,14	0/0:25,0:25:71.91:0,72,1185	0/0:34,0:34:90.23:0,90,1451	0/0:23,0:21:51.14:0,51,805	0/0:33,0:33:84.27:0,84,1400	1/1:17,14:32:38.04:1154,38,0	0/1:17,5:22:49.40:389,0,49	1/1:17,6:23:15.27:600,15,0	1/1:12,2:14:18.27:418,18,0	0/1:17,4:21:42.40:487,0,42	0/0:26,0:26:54.16:0,54,854	0/0:26,0:26:66.17:0,66,1015	0/0:37,0:37:99:0,105,1653	0/1:8,0:8:11.31:11,0,42	0/0:10,0:10:24.08:0,24,390	0/0:31,0:31:90.25:0,90,1382	0/1:13,0:13:3.35:3,0,42	0/0:16,0:16:48.15:0,48,790	1/1:31,10:41:47.73:1098,48,0	./.	0/0:22,0:22:57.18:0,57,938	0/0:21,0:20:60.11:0,60,958	0/0:31,0:31:93.32:0,93,1585	0/0:21,0:21:48.02:0,48,749
chr10	6092393	.	GAGT	G	4240.68	PASS	AB=0.958;AC=19;AF=0.339;AN=56;BaseQRankSum=15.926;DP=714;FS=0.345;HRun=0;HaplotypeScore=262.7830;InbreedingCoeff=0.8522;MQ=59.06;MQ0=10;MQRankSum=-14.724;QD=18.52;ReadPosRankSum=-2.708;VQSLOD=3.8496;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:30.10:0,30,540	1/1:14,3:17:36.48:395,36,0	0/0:49,1:25:35.53:0,36,1008	0/0:63,0:46:68.41:0,68,1406	1/1:25,10:34:41.18:595,41,0	0/0:26,0:26:58.75:0,59,1622	0/0:33,0:33:93.30:0,93,2028	0/0:23,0:21:54.10:0,54,1068	0/0:31,0:31:84.27:0,84,1894	1/1:27,5:32:47.09:641,47,0	1/1:18,4:22:23.14:364,23,0	1/1:18,4:22:50.84:429,51,0	1/1:7,6:13:29.37:364,29,0	1/1:17,3:21:49.31:456,49,0	0/0:26,0:26:54.17:0,54,1156	0/0:26,0:26:69.18:0,69,1406	0/0:37,0:37:99:0,104,2264	0/1:6,1:7:15.19:32,0,15	0/0:10,0:10:27.09:0,27,579	0/0:31,0:31:90.27:0,90,1918	0/1:13,0:13:0.40:0,0,17	0/0:16,0:16:48.16:0,48,1096	1/1:29,12:41:86.86:964,87,0	0/1:6,0:6:0:0,0,0	0/0:22,0:22:57.20:0,57,1299	0/0:21,0:20:60.08:0,60,1252	0/0:31,0:31:93.32:0,93,2172	0/0:23,0:23:54.04:0,54,1043
chr10	6092395	.	GTAA	G	3484.26	PASS	AB=0.970;AC=20;AF=0.357;AN=56;BaseQRankSum=15.552;DP=698;FS=2.079;HRun=0;HaplotypeScore=261.9185;InbreedingCoeff=0.8816;MQ=58.83;MQ0=10;MQRankSum=-14.305;QD=15.69;ReadPosRankSum=-3.196;VQSLOD=2.2982;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:29.76:0,30,404	1/1:15,2:17:26.71:296,27,0	0/0:48,0:24:35.73:0,36,1073	0/0:60,0:45:77.47:0,77,1589	1/1:34,1:34:36.33:417,36,0	0/0:25,1:26:48.74:0,49,1655	0/0:34,0:34:96.16:0,96,2146	0/0:22,0:20:54.17:0,54,1113	0/0:31,0:31:84.29:0,84,2013	0/1:29,2:31:11.40:484,0,11	1/1:19,3:22:30.18:359,30,0	1/1:20,2:22:33.68:423,34,0	1/1:11,1:12:24.23:256,24,0	1/1:20,1:21:42.67:444,43,0	0/0:24,0:24:57.15:0,57,1230	0/0:24,0:24:66.23:0,66,1528	0/0:37,0:37:87.95:0,88,2308	1/1:6,0:6:11.94:77,12,0	0/0:10,0:10:27.09:0,27,650	0/0:29,0:29:87.30:0,87,2053	1/1:12,0:12:6.81:38,7,0	0/0:16,0:16:48.16:0,48,1142	1/1:35,4:39:63.14:690,63,0	0/1:5,0:5:0:0,0,0	0/0:21,0:21:57.20:0,57,1349	0/0:21,0:20:60.20:0,60,1364	0/0:31,0:31:93.32:0,93,2277	0/0:23,0:23:54.18:0,54,1211
chr10	6092402	.	GAGA	G	2856.52	PASS	AB=0.822;AC=18;AF=0.321;AN=56;BaseQRankSum=14.807;DP=725;FS=6.616;HRun=0;HaplotypeScore=282.1738;InbreedingCoeff=0.5771;MQ=55.24;MQ0=10;MQRankSum=-13.056;QD=11.07;ReadPosRankSum=-3.478;VQSLOD=1.9574;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,0:12:11.92:86,12,0	0/1:14,3:17:5.35:160,0,5	0/0:52,0:25:57.30:0,57,1032	0/0:61,0:41:72.99:0,73,1404	1/1:28,9:36:39.16:394,39,0	0/0:24,0:24:51.72:0,52,1271	0/0:32,0:32:86.64:0,87,1857	0/0:21,0:19:47.98:0,48,809	0/0:33,0:33:87.25:0,87,1835	0/1:34,2:36:98.58:327,0,99	1/1:19,3:24:16.20:285,16,0	0/1:18,6:26:36.39:472,0,36	0/1:13,3:16:20.17:209,0,20	1/1:11,8:20:21.48:388,21,0	0/0:24,0:24:57.15:0,57,1129	0/0:23,0:23:63.22:0,63,1423	0/0:34,0:34:70.57:0,71,1593	1/1:4,3:7:1.92:94,2,0	0/0:14,0:12:33.09:0,33,639	0/0:30,0:30:90.29:0,90,1918	0/1:5,8:13:1.85:80,0,2	0/0:15,0:15:45.14:0,45,905	1/1:34,9:43:40.49:546,40,0	0/1:5,1:6:0:0,0,0	0/0:21,0:21:57.20:0,57,1231	0/0:23,0:21:60.18:0,60,1239	0/0:30,0:30:84.29:0,84,1830	0/0:28,0:28:68.81:0,69,1327
chr10	6092405	.	A	ATG	944.37	PASS	AB=0.870;AC=10;AF=0.185;AN=54;BaseQRankSum=11.522;DP=730;FS=5.122;HRun=0;HaplotypeScore=294.5284;InbreedingCoeff=-0.0796;MQ=55.08;MQ0=11;MQRankSum=-10.755;QD=4.05;ReadPosRankSum=-0.232;VQSLOD=2.2680;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:20.74:0,21,145	0/1:14,3:17:24.07:105,0,24	0/0:54,0:25:64.30:0,64,948	0/0:62,0:42:92.38:0,92,1270	0/1:30,5:36:17.18:100,0,17	0/0:24,0:24:65.51:0,66,982	0/0:32,0:32:90.29:0,90,1398	0/0:20,0:18:51.17:0,51,758	0/0:32,0:32:84.29:0,84,1345	0/1:35,6:40:99:437,0,100	0/1:19,2:23:75.91:76,0,92	0/1:22,3:28:67.85:68,0,105	0/0:17,0:17:22.67:0,23,119	0/1:19,2:22:68.55:69,0,137	0/0:22,0:22:51.17:0,51,815	0/0:23,0:23:66.22:0,66,1040	0/0:34,0:34:87.11:0,87,1284	0/1:7,0:7:23.74:24,0,57	0/0:12,0:10:27.09:0,27,446	0/0:30,0:30:90.29:0,90,1389	1/1:14,0:14:0.04:14,0,0	0/0:16,0:16:44.31:0,44,696	0/1:36,5:42:19.45:190,0,19	./.	0/0:22,0:22:56.47:0,56,923	0/0:22,0:20:60.20:0,60,922	0/0:29,0:29:84.28:0,84,1326	0/0:28,0:28:69.23:0,69,1017
chr10	6092416	.	A	AGAG	14062.08	PASS	AB=0.971;AC=40;AF=0.714;AN=56;BaseQRankSum=-8.395;DP=753;FS=2.720;HRun=0;HaplotypeScore=271.8652;InbreedingCoeff=0.0787;MQ=54.29;MQ0=11;MQRankSum=7.334;QD=22.46;ReadPosRankSum=7.556;VQSLOD=4.1931;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:5:2.73:0,3,16	0/1:19,0:19:27.99:174,0,28	0/0:56,0:24:23.71:0,24,308	0/0:66,0:39:24.28:0,24,560	0/1:39,0:37:62.70:63,0,110	1/1:8,14:22:35.79:692,36,0	1/1:9,24:33:43.19:1162,43,0	1/1:12,7:17:30.09:532,30,0	1/1:11,22:35:51.18:1052,51,0	0/1:48,0:46:99:393,0,173	0/1:24,0:24:40.73:171,0,41	0/1:31,0:31:33.26:238,0,33	0/1:21,0:21:12.95:13,0,108	0/1:22,0:22:79.69:116,0,80	1/1:2,20:23:42.14:866,42,0	1/1:6,22:28:47.86:990,48,0	1/1:3,27:31:57.67:1177,58,0	0/1:6,0:7:16.34:49,0,16	1/1:4,8:12:26.83:405,27,0	1/1:8,22:31:63.06:1109,63,0	0/1:12,0:15:7.59:30,0,8	1/1:6,9:15:21.07:401,21,0	0/1:42,0:42:70.55:272,0,71	1/1:7,0:7:2.94:18,3,0	1/1:5,18:23:39.13:799,39,0	1/1:5,15:18:48.08:906,48,0	1/1:16,13:29:78.11:1324,78,0	1/1:3,23:27:54.19:1112,54,0
chr10	6092429	.	GAGT	G	1484.56	PASS	AB=0.989;AC=12;AF=0.214;AN=56;BaseQRankSum=10.584;DP=699;FS=6.265;HRun=0;HaplotypeScore=291.9929;InbreedingCoeff=-0.0572;MQ=54.73;MQ0=7;MQRankSum=-7.827;QD=5.42;ReadPosRankSum=-1.254;VQSLOD=1.5450;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:5:3.30:0,3,31	0/1:14,0:14:77.82:78,0,80	0/0:53,0:24:31.80:0,32,682	0/0:56,0:30:42.36:0,42,1032	0/1:37,1:36:23.08:187,0,23	0/0:16,0:16:25.75:0,26,509	0/0:31,0:31:68.61:0,69,993	0/0:19,0:17:44.96:0,45,641	0/0:28,0:28:65.99:0,66,913	0/1:44,1:43:99:264,0,226	0/1:24,0:24:56.50:156,0,56	0/1:29,0:29:52.89:284,0,53	0/1:18,0:17:22.39:87,0,22	0/1:19,0:19:13.81:194,0,14	0/0:28,0:28:59.96:0,60,783	0/0:27,0:27:60.56:0,61,863	0/0:34,0:34:71.66:0,72,1036	1/1:5,1:6:7.38:94,7,0	0/0:15,0:14:42.03:0,42,556	0/0:27,0:27:15.61:0,16,744	0/1:14,1:15:3.84:53,0,4	0/0:14,0:14:17.77:0,18,373	0/1:38,0:38:35.99:203,0,36	0/0:4,0:4:2.90:0,3,16	0/0:24,0:24:48.57:0,49,717	0/0:20,0:19:57.06:0,57,842	0/1:28,0:28:35.81:36,0,868	0/0:24,0:24:54.18:0,54,852
chr10	6092431	.	GTAA	G	1372.73	PASS	AB=0.938;AC=14;AF=0.250;AN=56;BaseQRankSum=10.147;DP=650;FS=8.532;HRun=0;HaplotypeScore=277.7748;InbreedingCoeff=-0.1585;MQ=55.44;MQ0=6;MQRankSum=-10.755;QD=4.69;ReadPosRankSum=-1.290;VQSLOD=0.6450;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:3,0:3:5.53:0,6,29	0/1:12,1:13:69.66:116,0,70	0/0:49,1:22:5.01:0,5,839	0/0:52,1:29:62.40:0,62,1204	0/1:32,5:35:99:125,0,109	0/1:15,0:15:1.57:2,0,442	0/0:29,1:30:55.20:0,55,1072	0/0:18,0:17:44.54:0,45,679	0/0:25,0:25:59.52:0,60,840	0/1:38,3:39:99:259,0,268	0/1:19,1:21:99:146,0,165	0/1:25,1:26:6.73:231,0,7	0/1:14,2:15:13.60:99,0,14	0/1:18,0:18:45.47:72,0,45	0/0:24,0:24:63.21:0,63,959	0/0:25,0:25:29.01:0,29,833	0/0:32,0:32:70.33:0,70,1082	0/1:5,0:6:6.38:39,0,6	0/0:14,0:14:42.14:0,42,722	0/1:22,0:22:35.69:36,0,761	1/1:12,0:15:1.04:110,1,0	0/0:13,0:13:35.69:0,36,488	0/1:31,4:35:99:110,0,206	0/0:1,2:4:2.68:0,3,11	0/0:20,0:20:47.99:0,48,748	0/0:20,0:19:57.19:0,57,866	0/1:28,0:28:99:177,0,869	0/0:24,0:24:54.17:0,54,749
chr10	6092440	.	GAAGGAAGAAGAA	G	2163.33	PASS	AB=0.978;AC=14;AF=0.250;AN=56;BaseQRankSum=8.577;DP=658;FS=16.162;HRun=0;HaplotypeScore=369.2902;InbreedingCoeff=0.0320;MQ=52.41;MQ0=7;MQRankSum=-11.723;QD=8.65;ReadPosRankSum=-2.797;VQSLOD=0.5170;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:5,0:5:2.68:84,3,0	0/1:12,0:12:99:101,0,151	0/0:42,0:17:48.55:0,49,1280	0/0:46,0:23:51.41:0,51,1426	0/1:33,2:32:99:343,0,105	0/1:14,0:15:2.28:2,0,1336	0/0:32,0:32:80.69:0,81,2624	0/0:28,0:25:64.45:0,64,1517	0/0:25,0:25:59.79:0,60,2351	0/1:41,1:41:99:477,0,455	0/1:22,0:22:99:172,0,184	0/1:24,0:24:66.37:180,0,66	0/1:16,1:16:99:301,0,109	0/1:19,0:19:72.84:73,0,103	0/0:24,0:24:63.07:0,63,3176	0/0:27,0:27:63.51:0,64,3027	0/0:36,0:36:87.25:0,87,3828	0/1:9,0:9:12.75:186,0,13	0/0:15,0:15:45.13:0,45,1824	0/0:21,0:21:63.22:0,63,2851	1/1:16,0:16:17.32:201,17,0	0/0:16,0:16:48.11:0,48,1957	0/1:33,1:34:99:199,0,377	0/0:5,0:4:0.47:0,0,1	0/0:20,0:20:48.11:0,48,2350	0/0:23,0:22:66.20:0,66,1704	0/0:28,0:28:82.89:0,83,2017	0/0:20,0:20:57.17:0,57,1797
chr10	6092452	.	AGAGGAG	A	2508.45	PASS	AB=0.725;AC=7;AF=0.125;AN=56;BaseQRankSum=-1.866;DP=657;FS=18.796;HRun=0;HaplotypeScore=284.7878;InbreedingCoeff=0.7752;MQ=51.49;MQ0=13;MQRankSum=-4.335;QD=27.57;ReadPosRankSum=-0.017;VQSLOD=1.5688;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:26.75:0,27,287	0/0:12,0:12:24.48:0,24,312	0/0:54,0:25:48.19:0,48,1005	0/0:38,0:17:3.69:0,4,444	0/0:32,0:30:23.65:0,24,218	0/0:16,0:16:27.97:0,28,702	0/0:23,0:23:24.08:0,24,700	0/1:18,11:25:8.38:528,0,8	0/0:23,0:23:36.11:0,36,1055	0/0:41,0:40:71.28:0,71,1081	0/0:24,0:24:20.74:0,21,276	0/0:22,0:22:33.07:0,33,501	0/0:19,0:18:48.10:0,48,740	0/0:17,0:16:21.07:0,21,328	0/0:26,0:26:55.43:0,55,1479	0/0:26,0:26:48.07:0,48,1470	0/0:35,0:35:60.16:0,60,1775	0/0:8,0:8:21.53:0,22,204	0/0:18,0:18:39.12:0,39,964	0/0:23,0:22:48.12:0,48,1318	0/0:14,0:13:6.79:0,7,60	0/0:20,0:20:57.20:0,57,1633	0/0:32,0:32:49.48:0,49,685	0/0:9,0:8:9.03:0,9,129	0/0:22,0:22:39.13:0,39,1089	1/1:4,13:16:39.10:739,39,0	1/1:9,17:26:42.14:889,42,0	1/1:12,7:19:24.08:500,24,0
chr10	6093192	.	A	AATATATAT	4382.89	PASS	AB=1.000;AC=19;AF=0.365;AN=52;BaseQRankSum=1.459;DP=434;FS=0.000;HRun=0;HaplotypeScore=118.1440;InbreedingCoeff=0.8529;MQ=65.55;MQ0=2;MQRankSum=-7.406;QD=46.63;ReadPosRankSum=-2.203;VQSLOD=4.0163;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:48.04:0,48,1060	./.	0/0:20,0:19:27.50:0,27,560	0/1:19,0:15:3.93:4,0,430	1/1:8,4:12:21.05:607,21,0	0/0:19,0:19:42.10:0,42,1061	0/0:19,0:19:25.14:0,25,1034	0/0:29,0:29:75.24:0,75,1771	0/0:17,0:17:51.15:0,51,1269	1/1:7,8:16:39.12:1387,39,0	1/1:5,4:9:12.04:510,12,0	1/1:5,4:9:15.04:457,15,0	1/1:2,2:4:6.02:255,6,0	1/1:3,0:5:6.02:211,6,0	0/0:12,0:12:15.05:0,15,372	0/0:13,0:13:36.12:0,36,961	0/0:40,0:39:87.27:0,87,2250	1/1:7,4:12:15.05:523,15,0	0/0:26,0:26:57.19:0,57,1429	0/0:18,0:18:50.16:0,50,1175	./.	0/0:19,0:19:51.11:0,51,1278	1/1:1,1:2:3.01:127,3,0	1/1:4,2:6:9.03:301,9,0	0/0:18,0:18:33.10:0,33,785	0/0:23,0:23:63.16:0,63,1522	0/0:24,0:24:47.69:0,48,1281	0/0:10,0:10:27.09:0,27,712
chr10	6093242	.	GGTGT	G	1600.45	PASS	AB=0.844;AC=30;AF=0.600;AN=50;BaseQRankSum=0.086;DP=386;FS=17.946;HRun=0;HaplotypeScore=95.4355;InbreedingCoeff=-0.0146;MQ=50.77;MQ0=16;MQRankSum=-0.550;QD=5.88;ReadPosRankSum=-2.002;VQSLOD=0.6274;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:16,0:20:38.34:38,0,45	1/1:4,0:4:2.04:6,2,0	./.	./.	0/0:5,0:5:0:0,0,0	0/1:8,1:11:29.97:38,0,30	0/1:12,0:12:8.47:8,0,21	0/0:25,0:25:5.96:0,6,43	0/1:13,4:18:7.95:202,0,8	0/0:14,0:12:6.92:0,7,112	0/0:4,0:4:6.01:0,6,73	0/1:11,0:10:30.74:55,0,31	1/1:5,0:5:5.80:43,6,0	1/1:10,0:10:8.52:64,9,0	1/1:4,7:14:11.94:136,12,0	1/1:5,5:14:15.03:177,15,0	1/1:18,9:26:15.32:256,15,0	1/1:12,0:12:1.67:67,2,0	1/1:9,2:11:3.01:47,3,0	0/1:13,4:16:12.94:101,0,13	0/0:20,0:18:10.79:0,11,91	0/1:12,7:18:29.15:38,0,29	./.	0/1:9,0:8:8.98:53,0,9	1/1:1,6:9:15.04:214,15,0	0/1:14,0:21:59.74:60,0,124	1/1:8,0:18:10.77:109,11,0	0/1:5,0:5:40.85:41,0,56
chr10	6093287	.	GTC	G	1626.29	PASS	AB=0.923;AC=24;AF=0.429;AN=56;BaseQRankSum=4.633;DP=434;FS=27.630;HRun=0;HaplotypeScore=104.7673;InbreedingCoeff=0.5333;MQ=49.63;MQ0=25;MQRankSum=2.266;QD=7.78;ReadPosRankSum=-4.325;VQSLOD=0.7946;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:25:43.08:246,43,0	1/1:4,0:3:3:25,3,0	0/0:17,0:4:8.95:0,9,69	0/0:20,0:4:11.85:0,12,87	1/1:10,1:10:14.54:121,15,0	0/1:18,0:17:35.79:36,0,172	0/1:17,0:16:5.92:6,0,258	0/0:16,0:15:41.83:0,42,344	0/0:17,0:16:8.97:0,9,139	0/1:13,0:12:36.33:135,0,36	0/1:10,0:10:24.33:136,0,24	1/1:11,0:9:17.94:142,18,0	1/1:7,0:7:8.98:72,9,0	1/1:9,0:9:15.42:118,15,0	0/1:15,0:14:21.87:22,0,78	0/0:19,0:18:31.40:0,31,218	0/0:30,0:27:23.65:0,24,224	1/1:16,0:16:45.86:322,46,0	0/0:13,0:12:35.42:0,35,279	0/0:16,0:15:5.68:0,6,166	1/1:27,0:24:8.81:179,9,0	0/0:16,0:15:17.49:0,17,135	0/1:1,6:7:0:0,0,0	1/1:17,1:17:32.92:264,33,0	0/0:17,0:17:35.40:0,35,217	0/0:19,0:17:36.69:0,37,255	0/0:17,0:17:13.85:0,14,124	0/0:8,0:7:11.86:0,12,97
chr10	6093289	.	CTG	C	348.90	PASS	AB=1.000;AC=5;AF=0.093;AN=54;BaseQRankSum=3.623;DP=433;FS=0.964;HRun=0;HaplotypeScore=110.3517;InbreedingCoeff=0.3958;MQ=49.76;MQ0=24;MQRankSum=2.495;QD=6.12;ReadPosRankSum=0.541;VQSLOD=2.9135;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:20,5:24:36.56:439,37,0	./.	0/0:17,0:4:12.01:0,12,156	0/0:21,0:4:11.83:0,12,149	0/1:13,0:12:2.76:3,0,18	0/0:18,0:17:29.54:0,30,419	0/0:16,0:15:36.12:0,36,572	0/0:18,0:17:45.15:0,45,688	0/0:17,0:16:32.78:0,33,361	0/0:12,0:12:13.48:0,13,121	0/0:9,0:9:1.89:0,2,23	0/1:13,0:11:4.25:4,0,39	0/0:8,0:8:2.41:0,2,17	0/0:8,0:8:1.55:0,2,4	0/0:15,0:14:3.37:0,3,183	0/0:20,0:19:41.42:0,41,485	0/0:29,0:26:55.15:0,55,558	0/0:16,0:16:1.40:0,1,7	0/0:15,0:14:36.11:0,36,522	0/0:15,0:14:30.01:0,30,400	0/0:24,0:21:1.29:0,1,3	0/0:16,0:15:21.04:0,21,285	0/1:6,0:6:0:0,0,0	0/0:17,0:16:0.72:0,1,2	0/0:17,0:17:38.88:0,39,457	0/0:18,0:17:27.90:0,28,368	0/0:17,0:17:27.52:0,28,277	0/0:8,0:7:13.82:0,14,193
chr10	6093368	.	G	GA	7175.64	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=3.043;DP=536;FS=2.887;HRun=5;HaplotypeScore=71.5233;InbreedingCoeff=0.9968;MQ=71.00;MQ0=0;MQRankSum=-2.259;QD=32.32;ReadPosRankSum=3.368;VQSLOD=5.5675;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:26:71.89:610,72,0	1/1:0,5:5:15.05:197,15,0	0/0:11,0:11:30.08:0,30,323	0/0:13,0:13:23.85:0,24,239	1/1:3,24:27:63.20:828,63,0	0/0:17,0:17:48.11:0,48,508	0/0:25,0:25:69.16:0,69,734	0/0:34,0:34:96.23:0,96,1025	0/0:16,0:16:45.11:0,45,483	1/1:2,13:15:39.13:513,39,0	1/1:3,20:23:57.19:749,57,0	1/1:2,17:19:51.12:651,51,0	1/1:0,17:17:48.16:632,48,0	1/1:0,13:13:36.12:474,36,0	0/0:18,0:18:54.14:0,54,580	0/0:15,0:15:39.10:0,39,419	0/0:20,0:20:60.15:0,60,644	1/1:2,24:26:66.21:868,66,0	0/0:16,0:16:42.10:0,42,452	0/0:26,0:26:69.17:0,69,741	1/1:3,15:18:42.14:553,42,0	0/0:18,0:18:54.12:0,54,570	1/1:1,8:9:21.07:276,21,0	1/1:3,21:24:63.20:826,63,0	0/0:20,0:20:60.15:0,60,644	0/0:22,0:22:63.15:0,63,670	0/0:28,0:28:81.20:0,81,869	0/0:15,0:15:45.11:0,45,483
chr10	6093369	.	A	AT	2875.92	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=14.875;DP=540;FS=2.820;HRun=0;HaplotypeScore=83.4428;InbreedingCoeff=0.6785;MQ=70.97;MQ0=0;MQRankSum=-2.951;QD=13.13;ReadPosRankSum=5.210;VQSLOD=4.5279;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,26:26:72.25:1123,72,0	1/1:5,0:5:13.66:61,14,0	0/0:11,0:11:33.08:0,33,440	0/0:13,0:13:35.71:0,36,404	0/1:27,0:27:48.88:210,0,49	0/0:18,0:18:51.16:0,51,697	0/0:24,0:24:72.20:0,72,984	0/0:34,0:34:99:0,99,1369	0/0:16,0:16:48.14:0,48,651	1/1:14,0:14:35.35:174,35,0	0/1:22,0:22:13.71:188,0,14	0/1:19,0:19:0.74:157,0,1	1/1:17,0:17:44.23:215,44,0	1/1:13,0:13:33.04:163,33,0	0/0:18,0:18:54.18:0,54,755	0/0:16,0:16:45.13:0,45,596	0/0:21,0:21:60.20:0,60,838	1/1:26,0:26:21.73:295,22,0	0/0:16,0:16:48.12:0,48,635	0/0:28,0:28:75.22:0,75,1014	0/1:17,0:17:7.51:154,0,8	0/0:18,0:18:54.18:0,54,754	0/1:9,0:9:3.28:73,0,3	1/1:24,0:24:13.62:264,14,0	0/0:22,0:22:60.20:0,60,839	0/0:23,0:23:66.20:0,66,904	0/0:27,0:27:81.27:0,81,1132	0/0:16,0:16:45.15:0,45,629
chr10	6093944	.	T	TC	1655.94	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.438;DP=795;FS=1.992;HRun=1;HaplotypeScore=73.7237;InbreedingCoeff=0.9995;MQ=86.76;MQ0=0;MQRankSum=-3.331;QD=36.80;ReadPosRankSum=0.436;VQSLOD=4.0058;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,43:45:99:1751,117,0	0/0:13,0:13:39.13:0,39,506	0/0:31,0:31:84.68:0,85,1042	0/0:29,0:29:66.57:0,67,972	0/0:40,0:40:99:0,100,1498	0/0:26,0:26:66.21:0,66,853	0/0:22,0:22:63.20:0,63,818	0/0:44,0:44:99:0,123,1574	0/0:17,0:17:51.17:0,51,662	0/0:33,0:33:99:0,99,1275	0/0:12,0:12:36.12:0,36,466	0/0:31,0:31:90.29:0,90,1168	0/0:38,0:38:99:0,114,1477	0/0:37,0:37:99:0,108,1373	0/0:29,0:29:87.26:0,87,1101	0/0:29,0:29:87.26:0,87,1101	0/0:19,0:19:57.13:0,57,706	0/0:11,0:11:33.11:0,33,428	0/0:19,0:19:57.19:0,57,739	0/0:35,0:35:99:0,99,1273	0/0:34,0:34:99:0,99,1270	0/0:24,0:24:72.20:0,72,904	0/0:35,0:35:99:0,102,1324	0/0:33,0:33:93.30:0,93,1206	0/0:22,0:22:63.18:0,63,802	0/0:30,0:30:87.28:0,87,1130	0/0:40,0:40:99:0,120,1557	0/0:17,0:17:51.17:0,51,662
chr10	6094349	.	C	CT	8827.92	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-15.423;DP=620;FS=0.317;HRun=2;HaplotypeScore=57.6025;InbreedingCoeff=0.9990;MQ=76.97;MQ0=0;MQRankSum=-0.899;QD=39.95;ReadPosRankSum=2.883;VQSLOD=5.1766;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:93.25:0,93,1135	1/1:1,10:11:30.10:432,30,0	0/0:10,0:10:27.08:0,27,319	0/0:18,0:18:45.13:0,45,540	1/1:1,24:25:69.19:965,69,0	0/0:24,0:24:69.22:0,69,854	0/0:24,0:24:66.19:0,66,806	0/0:32,0:32:87.26:0,87,1068	0/0:26,0:26:75.21:0,75,903	1/1:0,34:34:99:1434,102,0	1/1:1,23:24:72.24:1031,72,0	1/1:0,22:22:63.21:907,63,0	1/1:0,25:25:72.24:1036,72,0	1/1:0,17:17:51.17:734,51,0	0/0:28,0:28:78.22:0,78,943	0/0:22,0:22:63.17:0,63,756	0/0:20,0:20:60.19:0,60,743	1/1:1,8:9:21.07:302,21,0	0/0:18,0:18:48.13:0,48,573	0/0:31,0:31:93.28:0,93,1139	1/1:1,9:10:27.09:389,27,0	0/0:20,0:20:60.19:0,60,744	1/1:0,26:26:68.97:992,69,0	1/1:1,17:18:42.14:605,42,0	0/0:23,0:23:63.18:0,63,768	0/0:26,0:26:75.22:0,75,909	0/0:33,0:32:96.26:0,96,1152	0/0:11,0:11:33.10:0,33,409
chr10	6096874	.	G	GGTGT	2978.42	PASS	AB=0.948;AC=39;AF=0.780;AN=50;BaseQRankSum=-0.618;DP=623;FS=7.254;HRun=0;HaplotypeScore=144.8248;InbreedingCoeff=0.1295;MQ=69.26;MQ0=15;MQRankSum=-0.719;QD=6.17;ReadPosRankSum=-0.593;VQSLOD=2.0199;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:33:6.90:66,7,0	0/1:11,0:11:33.47:33,0,44	./.	./.	0/0:25,0:23:3:0,3,43	1/1:24,0:23:22.63:310,23,0	0/1:13,6:20:34.08:140,0,34	1/1:37,0:37:26.34:171,26,0	1/1:14,3:19:9.03:210,9,0	1/1:21,0:21:8.98:90,9,0	1/1:18,3:21:3.01:70,3,0	1/1:9,2:12:5.75:82,6,0	1/1:19,0:19:3.01:49,3,0	1/1:21,0:21:11.97:95,12,0	1/1:16,0:17:15.03:234,15,0	1/1:7,3:11:6.02:140,6,0	1/1:16,4:22:8.76:120,9,0	0/1:20,0:20:58.89:106,0,59	0/0:17,0:17:2.99:0,3,24	0/0:11,0:16:6.01:0,6,57	0/1:37,0:35:13.92:14,0,40	0/1:19,0:19:27.80:151,0,28	1/1:10,5:15:2.44:69,2,0	1/1:13,13:30:17.80:362,18,0	1/1:18,9:27:11.78:222,12,0	1/1:27,0:26:21.53:295,22,0	./.	1/1:10,0:10:6.02:92,6,0
chr10	6097486	.	TA	T	24434.17	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=3.200;DP=761;FS=5.880;HRun=2;HaplotypeScore=132.9945;InbreedingCoeff=0.9989;MQ=89.65;MQ0=0;MQRankSum=-12.294;QD=34.71;ReadPosRankSum=7.592;VQSLOD=3.5339;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:0,44:44:99:1440,111,0	1/1:0,13:13:36.07:448,36,0	0/0:25,0:26:70.11:0,70,970	0/0:31,0:31:90.23:0,90,1259	1/1:0,22:22:57.19:739,57,0	1/1:1,20:21:51.17:660,51,0	1/1:0,24:24:63.20:817,63,0	1/1:2,23:25:66.20:844,66,0	1/1:2,31:33:90.29:1168,90,0	1/1:2,28:30:87.24:1081,87,0	1/1:1,22:23:57.02:714,57,0	1/1:1,35:36:93.30:1207,93,0	1/1:0,33:33:87.23:1109,87,0	1/1:0,22:22:54.18:700,54,0	1/1:2,36:38:99:1401,108,0	1/1:0,31:31:87.28:1129,87,0	1/1:2,23:25:66.21:856,66,0	1/1:0,20:20:54.18:701,54,0	1/1:0,16:16:42.13:531,42,0	1/1:1,34:35:96.12:1183,96,0	1/1:0,30:30:87.28:1129,87,0	1/1:0,32:32:87.11:1110,87,0	1/1:0,23:23:69.22:895,69,0	1/1:0,23:23:54.18:701,54,0	1/1:0,26:26:69.22:894,69,0	1/1:0,33:33:95.83:1227,96,0	1/1:0,38:38:99:1440,111,0	1/1:0,8:8:24.08:311,24,0
chr10	6098261	.	A	AT	7311.04	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=10.320;DP=703;FS=0.976;HRun=8;HaplotypeScore=83.3499;InbreedingCoeff=0.9994;MQ=87.72;MQ0=0;MQRankSum=-0.542;QD=28.34;ReadPosRankSum=1.581;VQSLOD=5.0473;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:96.05:0,96,878	1/1:2,9:11:21.06:242,21,0	0/0:25,0:26:46.86:0,47,458	0/0:23,0:23:38.71:0,39,346	1/1:0,23:23:69.21:796,69,0	0/0:37,0:37:99:0,99,902	0/0:25,0:25:66.03:0,66,604	0/0:25,0:25:60.02:0,60,549	0/0:26,0:26:72.02:0,72,654	1/1:5,20:26:62.95:673,63,0	1/1:1,22:23:63.15:712,63,0	1/1:5,19:25:53.99:603,54,0	1/1:3,24:27:69.20:796,69,0	1/1:6,27:33:47.75:801,48,0	0/0:28,0:28:75.02:0,75,682	0/0:26,0:26:75.03:0,75,682	0/0:22,0:22:48:0,48,439	1/1:4,21:25:66.16:748,66,0	0/0:20,0:20:48:0,48,436	0/0:21,0:21:60.03:0,60,548	1/1:3,16:19:48.14:554,48,0	0/0:29,0:29:75.03:0,75,686	1/1:1,21:22:51.15:588,51,0	1/1:1,23:24:69.20:796,69,0	0/0:25,0:25:69.02:0,69,628	0/0:32,1:33:52.28:0,52,717	0/0:24,0:24:66.03:0,66,604	0/0:21,0:21:60.03:0,60,549
chr10	6098628	.	T	TG	29060.67	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-4.977;DP=817;FS=0.545;HRun=2;HaplotypeScore=92.6868;InbreedingCoeff=0.9959;MQ=85.20;MQ0=0;MQRankSum=-11.589;QD=37.89;ReadPosRankSum=6.667;VQSLOD=4.4921;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,43:46:99:1886,132,0	1/1:1,20:21:57.19:820,57,0	0/0:18,0:18:50.73:0,51,591	0/0:32,0:32:93.21:0,93,1096	1/1:3,20:23:57.19:820,57,0	1/1:2,22:24:63.21:907,63,0	1/1:3,26:29:75.25:1070,75,0	1/1:1,22:23:66.21:932,66,0	1/1:3,28:31:81.27:1166,81,0	1/1:0,30:30:90.29:1276,90,0	1/1:0,30:30:81.27:1157,81,0	1/1:0,29:29:84.28:1209,84,0	1/1:1,36:37:99:1426,99,0	1/1:1,29:30:69.23:986,69,0	1/1:2,40:42:99:1685,117,0	1/1:0,33:33:90.30:1296,90,0	1/1:2,29:31:78.26:1123,78,0	1/1:3,15:19:42.14:596,42,0	1/1:1,27:28:78.21:1081,78,0	1/1:1,25:26:72.22:1007,72,0	1/1:2,49:51:99:1901,132,0	1/1:3,38:41:99:1390,99,0	1/1:1,23:24:57.19:818,57,0	1/1:1,28:29:75.25:1080,75,0	1/1:0,24:24:63.21:907,63,0	1/1:2,27:29:81.26:1147,81,0	1/1:3,28:31:78.26:1115,78,0	1/1:0,6:6:18.06:259,18,0
chr10	6099129	.	C	CGTTG	49262.69	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-7.549;DP=840;FS=3.638;HRun=0;HaplotypeScore=142.0934;InbreedingCoeff=0.9704;MQ=70.14;MQ0=1;MQRankSum=-12.130;QD=64.23;ReadPosRankSum=5.207;VQSLOD=6.7974;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,0:46:99:2113,102,0	1/1:1,4:6:9.03:246,9,0	0/0:36,0:36:96.31:0,96,1737	0/0:37,0:37:77.70:0,78,1639	1/1:3,29:34:90.31:2322,90,0	1/1:1,19:21:54.19:1477,54,0	1/1:3,18:21:60.21:1551,60,0	1/1:18,0:37:99:2119,108,0	1/1:5,20:25:72.20:1821,72,0	1/1:12,27:41:99:3064,120,0	1/1:4,10:16:33.04:813,33,0	1/1:6,22:32:78.27:2031,78,0	1/1:4,24:28:72.25:1947,72,0	1/1:2,39:43:99:3280,120,0	1/1:7,45:55:99:3462,129,0	1/1:4,26:33:87.30:2228,87,0	1/1:3,42:45:99:3241,120,0	1/1:3,14:18:42.14:1150,42,0	1/1:9,9:22:54.06:1113,54,0	1/1:2,18:21:54.19:1450,54,0	1/1:4,54:58:99:3976,151,0	1/1:6,27:34:93.23:2260,93,0	1/1:4,16:21:51.17:1323,51,0	1/1:2,20:21:54.66:1476,55,0	1/1:5,19:24:63.22:1655,63,0	1/1:5,0:31:93.19:1652,93,0	1/1:4,0:21:45.15:898,45,0	1/1:0,0:11:30.10:595,30,0
chr10	6099840	.	CAA	C	2993.29	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=9.735;DP=349;FS=0.986;HRun=6;HaplotypeScore=42.6416;InbreedingCoeff=0.9533;MQ=73.20;MQ0=0;MQRankSum=-0.250;QD=32.19;ReadPosRankSum=0.060;VQSLOD=2.6500;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:21:50.53:0,51,1022	0/0:6,0:6:18.06:0,18,324	0/0:11,0:11:30.10:0,30,498	0/0:6,0:6:14.84:0,15,227	0/0:18,0:18:54.17:0,54,943	0/0:12,0:12:36.04:0,36,576	0/0:6,0:6:15.05:0,15,270	1/1:6,26:32:75.22:985,75,0	0/0:5,0:5:15.05:0,15,264	0/0:14,0:14:39.13:0,39,673	0/0:11,0:11:33.11:0,33,594	0/0:7,0:7:21.07:0,21,378	0/0:4,0:4:12:0,12,182	0/0:11,0:11:33.11:0,33,594	0/0:8,0:8:24.08:0,24,432	0/0:7,0:7:21.07:0,21,378	0/0:21,0:20:54.13:0,54,910	0/0:12,0:12:36.08:0,36,614	0/0:18,0:18:48.16:0,48,863	0/0:14,0:14:39.13:0,39,703	0/0:7,0:7:21.07:0,21,378	0/0:6,0:6:18.06:0,18,324	0/0:7,0:7:21.07:0,21,378	0/0:3,0:3:9.03:0,9,162	0/0:21,0:21:63.22:0,63,1125	1/1:0,20:20:57.15:728,57,0	1/1:0,18:18:51.17:680,51,0	1/1:3,20:23:57.19:760,57,0
chr10	6099924	.	TTTTTG	T	10454.73	PASS	AC=50;AF=0.926;AN=54;BaseQRankSum=0.298;DP=420;FS=19.227;HRun=0;HaplotypeScore=106.5499;InbreedingCoeff=0.8024;MQ=53.12;MQ0=2;MQRankSum=-2.493;QD=27.66;ReadPosRankSum=4.654;VQSLOD=3.2948;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,14:21:30.02:484,30,0	1/1:2,5:7:12.04:222,12,0	0/0:14,0:11:16.28:0,16,295	0/0:25,0:15:16.30:0,16,352	1/1:4,17:21:32.76:496,33,0	1/1:5,12:17:33.11:611,33,0	1/1:1,6:7:18.06:333,18,0	1/1:18,12:29:35.87:473,36,0	1/1:4,11:15:27.09:500,27,0	1/1:7,9:16:24.08:445,24,0	1/1:3,17:20:39:615,39,0	1/1:5,5:10:15.05:276,15,0	1/1:2,5:7:15.05:278,15,0	1/1:2,6:8:21.06:360,21,0	1/1:2,9:11:21.04:354,21,0	1/1:2,13:15:36.12:667,36,0	1/1:15,5:18:3.01:56,3,0	1/1:7,8:15:18.06:334,18,0	1/1:16,3:19:9:107,9,0	1/1:6,10:16:24.08:444,24,0	./.	1/1:2,12:14:30.10:556,30,0	1/1:4,10:14:30.10:552,30,0	1/1:5,5:10:12.04:222,12,0	1/1:6,22:28:60.21:1111,60,0	1/1:7,6:13:21.06:360,21,0	1/1:10,6:15:24.08:432,24,0	1/1:5,3:8:8.77:167,9,0
chr10	6100314	.	TGAG	T	2992.94	PASS	AB=0.516;AC=9;AF=0.161;AN=56;BaseQRankSum=14.438;DP=574;FS=1.367;HRun=0;HaplotypeScore=124.6168;InbreedingCoeff=0.8509;MQ=96.51;MQ0=0;MQRankSum=-13.333;QD=31.50;ReadPosRankSum=0.026;VQSLOD=3.7492;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,27:27:69.21:811,69,0	0/0:10,0:10:30.10:0,30,739	0/0:25,0:25:75.24:0,75,1711	0/0:35,0:35:99:0,99,2161	0/0:19,0:19:54.19:0,54,1290	0/0:14,0:14:42.14:0,42,1035	0/0:31,0:31:90.31:0,90,2179	1/1:0,12:14:42.11:491,42,0	0/0:27,0:27:81.26:0,81,1922	0/0:19,0:19:54.19:0,54,1331	0/0:8,0:8:24.08:0,24,571	0/0:25,0:25:75.24:0,75,1753	0/0:27,0:27:81.28:0,81,1985	0/0:30,0:30:90.27:0,90,2071	0/0:29,0:29:87.28:0,87,2085	0/0:16,0:16:48.15:0,48,1131	0/0:18,0:18:54.19:0,54,1330	0/0:15,0:15:45.15:0,45,1108	0/0:16,0:16:48.16:0,48,1182	0/0:18,0:18:51.18:0,51,1253	0/0:28,0:28:84.27:0,84,1991	0/0:11,0:11:27.04:0,27,664	0/0:14,0:14:36.12:0,36,873	0/0:22,0:22:66.15:0,66,1519	0/0:22,0:22:60.21:0,60,1434	0/1:1,15:16:25.82:492,0,26	1/1:2,33:35:99:1252,105,0	1/1:0,3:3:9.03:109,9,0
chr10	6100318	.	TATTC	T	3686.94	PASS	AB=0.531;AC=9;AF=0.161;AN=56;BaseQRankSum=14.327;DP=581;FS=1.373;HRun=0;HaplotypeScore=137.3077;InbreedingCoeff=0.8507;MQ=96.25;MQ0=0;MQRankSum=-14.049;QD=38.81;ReadPosRankSum=0.279;VQSLOD=4.0448;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,27:28:72.20:994,72,0	0/0:11,0:11:33.11:0,33,941	0/0:24,0:24:72.25:0,72,1992	0/0:36,0:36:99:0,108,2822	0/0:20,0:20:57.20:0,57,1649	0/0:15,0:15:45.15:0,45,1304	0/0:34,0:34:96.33:0,96,2661	1/1:2,12:14:36.59:526,37,0	0/0:28,0:28:84.26:0,84,2219	0/0:19,0:19:57.20:0,57,1636	0/0:8,0:8:24.04:0,24,626	0/0:26,0:26:78.24:0,78,2067	0/0:30,0:30:90.31:0,90,2604	0/0:28,0:28:84.29:0,84,2376	0/0:30,0:30:90.28:0,90,2471	0/0:15,0:15:45.15:0,45,1256	0/0:19,0:19:57.20:0,57,1652	0/0:15,0:15:45.15:0,45,1304	0/0:18,0:18:54.19:0,54,1546	0/0:18,0:18:51.18:0,51,1476	0/0:27,0:27:81.28:0,81,2316	0/0:10,0:10:30.10:0,30,869	0/0:14,0:14:42.14:0,42,1215	0/0:20,0:20:60.21:0,60,1731	0/0:21,0:21:63.21:0,63,1726	0/1:2,15:17:35.92:610,0,36	1/1:0,33:33:99:1427,99,0	1/1:0,3:3:9.03:130,9,0
chr10	6100321	.	TC	T	2337.12	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=14.540;DP=591;FS=0.000;HRun=1;HaplotypeScore=110.0732;InbreedingCoeff=0.9778;MQ=94.75;MQ0=0;MQRankSum=-12.994;QD=23.37;ReadPosRankSum=-0.898;VQSLOD=3.2542;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:28:71.96:624,72,0	0/0:12,0:12:36.11:0,36,552	0/0:23,0:23:69.21:0,69,1057	0/0:35,0:35:91.40:0,91,1489	0/0:21,0:21:63.18:0,63,958	0/0:16,0:16:48.16:0,48,764	0/0:31,0:31:90.29:0,90,1411	1/1:13,0:13:39.02:358,39,0	0/0:26,0:26:78.25:0,78,1208	0/0:19,0:19:57.19:0,57,909	0/0:8,0:8:21.07:0,21,322	0/0:23,0:23:69.23:0,69,1089	0/0:30,0:30:90.31:0,90,1437	0/0:29,0:29:81.28:0,81,1292	0/0:31,0:31:93.28:0,93,1415	0/0:16,0:16:48.15:0,48,737	0/0:19,0:19:57.19:0,57,911	0/0:16,0:16:48.14:0,48,742	0/0:18,0:18:54.18:0,54,858	0/0:19,0:19:57.19:0,57,902	0/0:29,0:29:87.28:0,87,1358	0/0:11,0:11:33.10:0,33,504	0/0:15,0:15:45.14:0,45,695	0/0:22,0:22:66.19:0,66,1001	0/0:22,0:22:60.18:0,60,933	1/1:16,4:20:12.01:464,12,0	1/1:36,0:36:99:981,108,0	1/1:3,0:3:9:81,9,0
chr10	6100986	.	TGTTCCA	T	1021.57	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.198;DP=619;FS=16.686;HRun=0;HaplotypeScore=209.8927;InbreedingCoeff=0.9935;MQ=90.59;MQ0=0;MQRankSum=-5.907;QD=48.65;ReadPosRankSum=0.912;VQSLOD=2.4687;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,20:21:48.16:1116,48,0	0/0:7,0:7:21.07:0,21,756	0/0:27,0:27:72.20:0,72,2032	0/0:27,0:27:60.30:0,60,1729	0/0:27,0:27:81.28:0,81,2825	0/0:21,0:21:63.19:0,63,1978	0/0:14,0:14:42.14:0,42,1505	0/0:31,0:31:84.25:0,84,2547	0/0:22,0:22:66.22:0,66,2193	0/0:26,0:26:78.27:0,78,2689	0/0:23,0:23:69.21:0,69,2233	0/0:25,0:25:69.20:0,69,2215	0/0:30,0:30:90.28:0,90,2986	0/0:25,0:25:75.17:0,75,2555	0/0:29,0:29:87.27:0,87,2831	0/0:22,0:22:66.21:0,66,2212	0/0:22,0:22:63.20:0,63,2183	0/0:8,0:8:24.08:0,24,794	0/0:21,0:21:60.20:0,60,2071	0/0:20,0:20:60.19:0,60,1989	0/0:20,0:20:60.21:0,60,2161	0/0:23,0:23:69.22:0,69,2400	0/0:22,0:22:63.20:0,63,2125	0/0:22,0:22:63.17:0,63,1971	0/0:18,0:18:54.19:0,54,1925	0/0:28,0:28:84.28:0,84,2918	0/0:28,0:27:84.27:0,84,2851	0/0:10,0:10:30.10:0,30,1079
chr10	6102139	.	T	TATTG	7994.31	PASS	AB=0.903;AC=51;AF=0.911;AN=56;BaseQRankSum=-10.879;DP=519;FS=36.549;HRun=0;HaplotypeScore=161.7334;InbreedingCoeff=0.1624;MQ=66.02;MQ0=6;MQRankSum=1.707;QD=15.40;ReadPosRankSum=6.795;VQSLOD=2.5836;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:16:16.59:214,17,0	1/1:2,8:10:26.86:326,27,0	0/1:20,0:8:1.15:1,0,26	0/1:16,0:10:3.24:3,0,15	1/1:30,0:29:35.66:405,36,0	1/1:19,0:19:5:164,5,0	1/1:15,0:15:34.83:297,35,0	1/1:37,0:37:86.88:770,87,0	0/1:18,0:18:0.66:195,0,1	1/1:28,0:28:75.02:709,75,0	1/1:23,0:23:25.21:298,25,0	1/1:11,0:11:23.86:253,24,0	1/1:17,0:17:23.16:295,23,0	1/1:13,0:13:13.01:134,13,0	1/1:20,0:20:5.68:176,6,0	0/1:14,0:14:6.92:90,0,7	1/1:11,0:11:17.79:186,18,0	1/1:17,0:17:2.75:225,3,0	1/1:20,0:20:47.66:382,48,0	1/1:28,0:28:55.41:597,55,0	1/1:8,0:8:8.57:108,9,0	1/1:5,0:5:9.47:78,9,0	1/1:19,0:17:18.45:246,18,0	1/1:6,0:6:10.74:125,11,0	1/1:35,0:35:29.35:514,29,0	1/1:2,17:20:58.24:789,58,0	1/1:4,19:23:15.05:340,15,0	0/1:1,18:20:1.97:73,0,2
chr10	6102189	.	TAGAC	T	5290.30	PASS	AB=0.998;AC=30;AF=0.536;AN=56;BaseQRankSum=-13.127;DP=523;FS=3.335;HRun=0;HaplotypeScore=172.8240;InbreedingCoeff=-0.5901;MQ=59.31;MQ0=5;MQRankSum=1.797;QD=10.48;ReadPosRankSum=-4.418;VQSLOD=3.4936;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:18,0:18:89.22:176,0,89	0/1:7,0:7:9.95:10,0,124	0/0:13,0:13:30.77:0,31,323	0/0:4,0:4:11.91:0,12,106	0/1:35,0:34:99:328,0,286	0/1:19,0:19:99:147,0,139	0/1:8,0:8:56.44:101,0,56	1/1:41,0:40:89.47:750,89,0	1/1:5,17:22:15.05:244,15,0	0/1:25,0:25:99:249,0,109	0/1:26,0:26:99:213,0,209	0/1:14,0:14:17.06:211,0,17	0/1:16,0:16:99:160,0,144	0/1:15,0:15:79.51:197,0,80	0/1:21,0:21:99:216,0,182	1/1:7,14:21:9.03:156,9,0	0/1:12,0:12:43.07:54,0,43	0/1:13,0:13:29.43:29,0,111	0/1:24,0:22:97.66:295,0,98	0/1:31,0:31:70.75:377,0,71	0/1:14,0:14:99:133,0,119	1/1:13,0:13:10.42:289,10,0	0/1:19,0:18:40.22:40,0,217	0/1:6,0:6:40.12:59,0,40	0/1:24,1:25:99:136,0,362	0/1:24,0:24:99:302,0,187	0/1:21,0:21:99:240,0,113	0/1:15,0:15:33.94:178,0,34
chr10	6104883	.	G	GT	21612.20	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-9.035;DP=778;FS=2.674;HRun=7;HaplotypeScore=71.0873;InbreedingCoeff=0.9977;MQ=87.60;MQ0=0;MQRankSum=-10.179;QD=29.85;ReadPosRankSum=7.221;VQSLOD=4.2641;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:5,0:41:86.25:439,86,0	1/1:2,11:14:32.97:377,33,0	0/0:29,0:29:72.02:0,72,675	0/0:25,0:25:57.08:0,57,547	1/1:0,21:21:60.18:724,60,0	1/1:2,19:21:57.17:688,57,0	1/1:6,15:21:42.13:505,42,0	1/1:6,25:31:75.23:906,75,0	1/1:4,28:32:52.27:913,52,0	1/1:7,36:43:99:1273,108,0	1/1:1,20:21:57.17:689,57,0	1/1:3,35:38:99:1234,103,0	1/1:1,26:27:72.22:870,72,0	1/1:4,33:37:93.29:1124,93,0	1/1:3,31:34:93.29:1124,93,0	1/1:4,34:38:99:1196,99,0	1/1:1,22:23:69:811,69,0	1/1:2,24:27:62.99:803,63,0	1/1:6,11:17:36.11:434,36,0	1/1:3,29:33:84.08:977,84,0	1/1:3,14:17:39.12:471,39,0	1/1:2,30:32:87.22:1033,87,0	1/1:4,28:32:78.24:942,78,0	1/1:2,32:31:87.27:1051,87,0	1/1:1,26:27:69.21:832,69,0	1/1:1,26:27:78.22:930,78,0	1/1:0,29:29:84.26:1015,84,0	1/1:0,7:7:21.06:254,21,0
chr10	6107676	.	A	AT	10663.37	PASS	AB=0.958;AC=44;AF=0.786;AN=56;BaseQRankSum=-4.263;DP=479;FS=6.045;HRun=7;HaplotypeScore=51.4300;InbreedingCoeff=0.7727;MQ=65.80;MQ0=0;MQRankSum=1.338;QD=26.53;ReadPosRankSum=1.884;VQSLOD=5.5515;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:70.28:0,70,743	1/1:1,9:10:21.06:253,21,0	0/1:7,0:7:12.65:13,0,49	0/0:5,0:5:6:0,6,58	1/1:3,20:23:60.18:723,60,0	1/1:0,18:18:42.05:476,42,0	1/1:3,12:15:17.86:380,18,0	0/0:19,0:19:39.05:0,39,373	1/1:1,13:14:39.12:471,39,0	1/1:3,18:21:54.17:651,54,0	1/1:4,15:19:45.14:543,45,0	1/1:3,14:17:36.11:435,36,0	1/1:2,21:23:57.17:688,57,0	1/1:3,9:12:24.07:290,24,0	1/1:2,19:21:48.15:580,48,0	1/1:2,10:12:27.08:326,27,0	1/1:2,16:18:45.14:544,45,0	1/1:2,16:18:45.14:544,45,0	1/1:4,16:20:51.15:606,51,0	1/1:4,21:25:57.17:680,57,0	1/1:4,13:17:39.12:471,39,0	1/1:2,13:15:36.11:435,36,0	1/1:2,11:13:33.07:383,33,0	1/1:1,13:14:30.09:362,30,0	1/1:5,23:28:66.20:797,66,0	0/1:20,2:22:12.35:12,0,461	0/0:18,0:18:48.02:0,48,453	0/0:7,0:7:21.03:0,21,203
chr10	6107828	.	GAA	G	5894.81	PASS	AB=0.798;AC=44;AF=0.786;AN=56;BaseQRankSum=-0.951;DP=354;FS=0.000;HRun=11;HaplotypeScore=73.9324;InbreedingCoeff=0.7195;MQ=59.49;MQ0=0;MQRankSum=-3.976;QD=19.91;ReadPosRankSum=3.827;VQSLOD=4.0312;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:1,0:2:2.78:3,0,4	1/1:3,12:15:33.08:351,33,0	0/0:14,0:8:14.44:0,14,142	0/0:10,0:10:14.37:0,14,128	1/1:9,18:27:59.80:580,60,0	1/1:1,6:8:2.87:128,3,0	1/1:1,9:10:23.98:255,24,0	0/0:9,0:9:12.93:0,13,187	1/1:2,6:8:18.04:191,18,0	1/1:5,12:18:33.01:396,33,0	1/1:6,25:32:74.39:743,74,0	1/1:1,10:11:21.05:224,21,0	1/1:2,4:6:14.92:141,15,0	1/1:0,5:5:15.04:159,15,0	1/1:2,5:8:8.98:151,9,0	1/1:2,7:9:23.98:241,24,0	1/1:5,9:14:16.84:165,17,0	1/1:4,6:10:19.23:173,19,0	1/1:2,6:7:15.01:149,15,0	1/1:3,10:13:8.67:295,9,0	1/1:4,1:5:0.60:1,1,0	1/1:5,17:22:39.06:412,39,0	1/1:3,17:20:48.02:496,48,0	1/1:4,4:8:1.74:30,2,0	1/1:4,19:23:57.11:605,57,0	0/1:12,1:13:4.89:5,0,310	0/0:18,0:18:42.10:0,42,613	0/0:7,0:7:8.99:0,9,112
chr10	6108012	.	GT	G	21531.66	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-1.626;DP=683;FS=8.125;HRun=2;HaplotypeScore=77.5277;InbreedingCoeff=0.9957;MQ=82.00;MQ0=0;MQRankSum=-12.348;QD=34.51;ReadPosRankSum=6.111;VQSLOD=4.7098;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,43:44:99:1344,105,0	1/1:0,14:14:33.02:399,33,0	0/0:30,0:30:84.11:0,84,1198	0/0:29,0:29:84.24:0,84,1196	1/1:1,21:22:48.63:623,49,0	1/1:0,20:20:48.16:618,48,0	1/1:1,26:27:75.24:973,75,0	1/1:1,22:23:66.20:842,66,0	1/1:0,26:26:69.22:895,69,0	1/1:1,22:23:51.08:610,51,0	1/1:0,19:19:51.17:662,51,0	1/1:1,29:30:78.25:1007,78,0	1/1:0,23:23:69.22:895,69,0	1/1:1,18:19:48.16:621,48,0	1/1:1,35:36:93.20:1183,93,0	1/1:0,34:34:90.22:1145,90,0	1/1:0,27:27:81.26:1051,81,0	1/1:0,20:20:54.18:701,54,0	1/1:1,17:18:51.17:660,51,0	1/1:0,19:19:54.13:681,54,0	1/1:2,39:41:99:1480,114,0	1/1:0,34:34:99:1323,102,0	1/1:1,17:18:48.16:623,48,0	1/1:0,21:21:57.19:739,57,0	1/1:0,18:18:54.13:682,54,0	1/1:1,25:26:75.22:957,75,0	1/1:0,16:16:45.15:584,45,0	1/1:0,6:6:18.06:234,18,0
chr10	6108791	.	CTA	C	1205.45	PASS	AB=0.983;AC=25;AF=0.481;AN=52;BaseQRankSum=-7.358;DP=588;FS=32.704;HRun=0;HaplotypeScore=145.1559;InbreedingCoeff=-0.3526;MQ=45.48;MQ0=34;MQRankSum=2.831;QD=2.13;ReadPosRankSum=2.142;VQSLOD=0.9427;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:9,0:9:8.41:0,8,50	0/1:71,0:11:8.73:9,0,62	0/1:100,0:16:32.61:33,0,92	0/1:38,0:36:43.01:43,0,49	0/1:25,0:25:28.88:56,0,29	0/1:22,0:21:4.32:81,0,4	0/0:7,0:7:9.83:0,10,50	0/1:8,0:8:3.18:53,0,3	0/1:21,1:22:97.36:107,0,97	0/1:20,2:22:5.27:62,0,5	1/1:16,0:16:10.87:117,11,0	0/1:22,1:23:6.25:126,0,6	1/1:24,0:24:11.82:91,12,0	0/1:28,0:27:20.14:65,0,20	0/1:21,1:21:5.80:6,0,50	0/1:13,1:14:3.01:81,0,3	0/1:17,0:17:44.65:85,0,45	0/1:18,0:18:55.32:55,0,147	0/1:19,0:18:1.05:41,0,1	0/1:8,0:8:8.20:17,0,8	0/1:23,0:22:15.32:17,0,15	0/1:21,1:19:8.76:58,0,9	1/1:9,0:9:8.29:66,8,0	0/1:15,0:15:4.30:83,0,4	0/0:2,0:2:1.75:0,2,25	0/0:1,0:1:2.97:0,3,20	./.
chr10	6108801	.	C	CTCTA	1907.52	PASS	AB=0.912;AC=30;AF=0.652;AN=46;BaseQRankSum=2.498;DP=577;FS=17.797;HRun=0;HaplotypeScore=177.7554;InbreedingCoeff=-0.2178;MQ=53.26;MQ0=34;MQRankSum=-1.063;QD=3.36;ReadPosRankSum=0.119;VQSLOD=1.7201;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	1/1:9,1:10:5.85:97,6,0	0/1:72,0:15:4.78:5,0,134	0/1:106,0:23:0.73:1,0,140	0/1:35,4:37:22.39:79,0,22	0/1:21,5:26:3.70:85,0,4	0/1:21,1:21:25.52:26,0,95	./.	0/0:7,0:7:2.98:0,3,22	0/1:19,5:24:13.92:418,0,14	0/1:24,0:24:8.64:45,0,9	1/1:13,3:16:8.75:77,9,0	0/1:19,4:23:5.41:298,0,5	1/1:21,2:23:2.90:53,3,0	0/1:22,4:25:22.72:23,0,41	0/1:18,5:22:1.76:88,0,2	0/1:12,2:14:2.45:15,0,2	1/1:14,1:15:21.14:249,21,0	0/1:15,4:17:13.09:349,0,13	1/1:12,1:12:5.84:35,6,0	0/1:7,0:7:10.37:10,0,15	1/1:17,5:21:2.94:18,3,0	1/1:17,5:20:9.28:43,9,0	0/1:8,0:8:0.02:0,0,0	1/1:11,2:13:4.50:22,4,0	./.	./.	./.
chr10	6108817	.	ATC	A	2452.15	PASS	AB=0.762;AC=21;AF=0.457;AN=46;BaseQRankSum=-2.456;DP=550;FS=3.989;HRun=0;HaplotypeScore=174.4288;InbreedingCoeff=-0.1368;MQ=66.46;MQ0=24;MQRankSum=1.349;QD=7.09;ReadPosRankSum=4.594;VQSLOD=3.0237;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	1/1:4,6:10:10.43:112,10,0	0/0:61,0:21:35.32:0,35,623	0/0:86,0:33:1.09:0,1,427	1/1:12,25:35:11.99:274,12,0	0/1:12,11:23:6.28:134,0,6	0/1:12,9:21:23.60:33,0,24	./.	0/0:8,0:8:2.74:0,3,12	0/1:26,0:26:99:545,0,138	1/1:10,13:23:8.73:121,9,0	0/1:13,0:13:3.43:70,0,3	0/1:26,0:26:4.16:66,0,4	0/1:23,0:23:15.47:21,0,15	0/1:15,9:23:11.62:70,0,12	0/1:10,12:21:0.27:220,0,0	0/1:7,11:18:25.18:149,0,25	0/1:8,7:15:98.18:137,0,98	0/1:10,12:20:99:419,0,183	1/1:6,10:15:9.03:123,9,0	0/1:2,5:7:26.45:35,0,26	0/0:24,0:23:16.47:0,16,71	0/1:8,12:19:3.14:61,0,3	0/0:2,3:5:0.47:0,0,1	0/0:15,0:16:5.34:0,5,22	./.	./.	./.
chr10	6108819	.	C	CTCTCTA	5894.73	PASS	AB=1.000;AC=38;AF=0.864;AN=44;BaseQRankSum=-2.938;DP=543;FS=0.797;HRun=0;HaplotypeScore=180.9996;InbreedingCoeff=0.4374;MQ=68.17;MQ0=21;MQRankSum=-3.511;QD=14.96;ReadPosRankSum=3.135;VQSLOD=4.4091;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	1/1:9,1:10:11.77:295,12,0	0/0:55,0:21:44.77:0,45,656	0/0:80,0:34:2.50:0,2,390	1/1:34,2:34:23.11:540,23,0	1/1:21,2:23:16.12:350,16,0	1/1:21,0:21:3.40:42,3,0	./.	./.	1/1:11,17:28:48.36:1225,48,0	1/1:23,0:23:9.03:272,9,0	1/1:2,13:16:6.02:136,6,0	1/1:5,20:25:14.56:429,15,0	1/1:8,15:24:2.77:100,3,0	1/1:23,1:23:7.97:137,8,0	1/1:20,2:21:22.14:517,22,0	1/1:19,0:19:14.89:312,15,0	0/1:13,0:13:1:312,0,1	1/1:19,2:19:39.11:762,39,0	1/1:16,0:15:9.03:187,9,0	1/1:7,0:7:3.01:71,3,0	1/1:11,13:23:2.04:6,2,0	1/1:18,1:18:8.06:196,8,0	0/1:5,0:5:0:0,0,0	1/1:6,10:18:2.04:6,2,0	./.	./.	./.
chr10	6109267	.	CAA	C	271.85	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=1.508;DP=515;FS=11.000;HRun=15;HaplotypeScore=80.1667;InbreedingCoeff=0.7704;MQ=50.54;MQ0=14;MQRankSum=1.140;QD=7.35;ReadPosRankSum=1.834;VQSLOD=0.0229;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:13,22:36:44.19:367,44,0	0/0:10,0:11:18.02:0,18,224	0/0:10,0:3:8.52:0,9,90	0/0:9,0:5:8.85:0,9,77	0/0:25,2:31:20.71:0,21,729	0/0:9,0:10:23.48:0,23,247	0/0:9,0:9:20.80:0,21,170	0/0:20,0:27:57.53:0,58,605	0/0:10,0:10:21.02:0,21,264	0/0:19,0:21:50.61:0,51,611	0/0:21,0:21:35.43:0,35,375	0/0:18,0:20:50.35:0,50,496	0/0:14,0:15:30.01:0,30,337	0/0:19,2:24:23.11:0,23,404	0/0:21,0:23:67.93:0,68,765	0/0:11,0:11:16.82:0,17,178	0/0:17,1:18:12.58:0,13,403	0/0:25,0:25:28.94:0,29,570	0/0:15,1:15:6.67:0,7,375	0/0:17,0:20:46.01:0,46,428	0/0:15,0:14:29.40:0,29,348	0/0:17,0:17:34.83:0,35,413	0/0:19,0:20:42.07:0,42,510	0/0:13,0:15:26.38:0,26,264	0/0:18,0:19:42.08:0,42,540	0/0:13,0:19:40.94:0,41,364	0/0:7,0:17:24.05:0,24,253	0/0:9,0:11:18.92:0,19,200
chr10	6109665	.	C	CA	23044.02	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-9.282;DP=676;FS=1.964;HRun=4;HaplotypeScore=55.2906;InbreedingCoeff=0.9995;MQ=90.88;MQ0=0;MQRankSum=-10.931;QD=36.93;ReadPosRankSum=6.265;VQSLOD=4.2968;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,47:49:99:1847,135,0	1/1:0,15:15:42.10:554,42,0	0/0:24,0:24:52.43:0,52,624	0/0:28,0:28:70.98:0,71,763	1/1:4,22:26:69.22:928,69,0	1/1:1,15:16:45.15:616,45,0	1/1:1,20:21:57.19:780,57,0	1/1:3,31:34:93.29:1254,93,0	1/1:3,15:18:45.15:616,45,0	1/1:3,26:29:81.26:1090,81,0	1/1:1,23:24:66.22:903,66,0	1/1:5,17:22:51.17:698,51,0	1/1:2,24:26:75.25:1026,75,0	1/1:0,24:24:69.23:943,69,0	1/1:1,32:33:90.30:1231,90,0	1/1:0,15:15:42.14:575,42,0	1/1:1,31:32:90.30:1231,90,0	1/1:0,13:13:39.13:534,39,0	1/1:2,21:23:63.17:827,63,0	1/1:1,24:23:69.23:944,69,0	1/1:0,29:29:87.29:1190,87,0	1/1:3,20:23:57.19:780,57,0	1/1:1,15:16:42.14:575,42,0	1/1:1,27:28:69.23:944,69,0	1/1:1,26:26:57.19:779,57,0	1/1:1,33:34:99:1338,99,0	1/1:2,10:12:33.11:449,33,0	1/1:1,9:10:30.09:395,30,0
chr10	6110439	.	C	CA	21635.89	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=15.178;DP=735;FS=2.140;HRun=0;HaplotypeScore=109.9851;InbreedingCoeff=0.9989;MQ=82.40;MQ0=0;MQRankSum=-5.882;QD=40.90;ReadPosRankSum=5.272;VQSLOD=4.6449;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,160,2218	1/1:2,10:12:30.10:448,30,0	0/0:26,0:26:40.78:0,41,762	0/0:17,0:17:51.01:0,51,622	1/1:0,23:23:66.22:983,66,0	1/1:0,22:22:60.20:900,60,0	1/1:0,35:35:99:1535,102,0	0/0:41,0:41:99:0,114,1552	1/1:0,35:35:93.31:1395,93,0	1/1:2,25:27:81.04:1153,81,0	1/1:1,13:14:33.07:469,33,0	1/1:0,21:21:60.20:899,60,0	1/1:0,30:30:81.27:1209,81,0	1/1:0,35:35:93.31:1399,93,0	1/1:1,33:34:93.32:1400,93,0	1/1:1,22:23:57.19:859,57,0	1/1:0,30:30:78.26:1172,78,0	1/1:0,17:17:51.17:766,51,0	1/1:0,13:13:39.12:567,39,0	1/1:0,16:16:48.16:721,48,0	1/1:1,50:51:99:1978,132,0	1/1:0,16:16:48.16:721,48,0	1/1:0,13:13:27.09:404,27,0	1/1:1,38:39:99:1707,114,0	1/1:0,23:23:63.21:948,63,0	0/0:34,1:35:50.21:0,50,1240	0/0:27,0:27:81.27:0,81,1130	0/0:7,0:7:21.04:0,21,272
chr10	6111051	.	T	TTCTC	2920.35	PASS	AB=0.934;AC=40;AF=0.833;AN=48;BaseQRankSum=-2.363;DP=642;FS=9.806;HRun=0;HaplotypeScore=125.9480;InbreedingCoeff=0.1743;MQ=63.52;MQ0=23;MQRankSum=1.820;QD=5.56;ReadPosRankSum=-0.409;VQSLOD=1.7601;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:23:6.01:0,6,55	1/1:10,0:10:2.99:24,3,0	./.	./.	0/1:31,0:30:49.95:50,0,84	1/1:31,0:31:17.20:294,17,0	1/1:21,0:26:23.37:322,23,0	./.	1/1:9,5:18:5.85:78,6,0	1/1:32,1:33:27.05:421,27,0	1/1:20,0:20:2.26:11,2,0	1/1:18,5:24:7.17:84,7,0	1/1:19,0:24:6.96:116,7,0	1/1:14,6:21:5.75:82,6,0	1/1:14,3:18:9.03:210,9,0	0/1:27,0:28:62.03:62,0,269	0/1:18,0:23:12.65:13,0,166	1/1:9,4:14:9.07:209,9,0	1/1:14,0:13:14.77:164,15,0	1/1:26,0:26:6:66,6,0	1/1:31,0:29:12.04:198,12,0	1/1:22,0:21:12.04:239,12,0	1/1:28,0:31:6.02:112,6,0	1/1:24,0:22:9.03:135,9,0	0/1:14,0:15:34.18:127,0,34	1/1:29,0:28:3.01:41,3,0	0/0:17,0:29:21.02:0,21,195	./.
chr10	6113266	.	T	TG	1782.81	PASS	AB=0.905;AC=53;AF=0.946;AN=56;BaseQRankSum=-2.472;DP=267;FS=24.422;HRun=1;HaplotypeScore=150.6126;InbreedingCoeff=-0.0325;MQ=50.19;MQ0=0;MQRankSum=-1.933;QD=6.68;ReadPosRankSum=1.899;VQSLOD=-0.7098;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,0:12:15.31:66,15,0	1/1:4,0:4:4.34:12,4,0	0/1:3,2:4:45.96:66,0,46	0/1:2,0:2:19.89:25,0,20	1/1:7,1:8:7.17:38,7,0	1/1:9,1:10:16.21:72,16,0	1/1:13,1:14:19.87:80,20,0	1/1:16,1:17:39.84:182,40,0	1/1:10,2:12:18.42:124,18,0	1/1:13,0:13:24.85:104,25,0	1/1:8,0:8:10.07:44,10,0	1/1:10,1:11:11.08:64,11,0	1/1:8,0:8:1.16:15,1,0	1/1:12,0:12:17.11:73,17,0	1/1:16,2:18:1.91:189,2,0	1/1:8,1:9:14.68:68,15,0	1/1:6,0:6:8.16:22,8,0	1/1:8,0:8:16.67:86,17,0	1/1:11,1:12:21.11:110,21,0	1/1:12,0:12:16.62:67,17,0	1/1:6,0:5:6.44:16,6,0	1/1:8,0:8:1.38:8,1,0	0/1:6,0:6:1.58:34,0,2	1/1:13,0:13:9.26:53,9,0	1/1:12,0:12:18.21:73,18,0	1/1:7,0:7:12.59:38,13,0	1/1:8,4:12:21.60:143,22,0	1/1:2,0:2:4.41:14,4,0
chr10	6114501	.	AATCT	A	2243.12	PASS	AB=0.990;AC=26;AF=0.542;AN=48;BaseQRankSum=0.785;DP=737;FS=0.000;HRun=0;HaplotypeScore=180.2635;InbreedingCoeff=0.3238;MQ=49.26;MQ0=11;MQRankSum=-0.480;QD=4.65;ReadPosRankSum=1.256;VQSLOD=2.6525;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:23:0:0,0,0	0/0:14,0:14:9.03:0,9,207	./.	./.	0/0:26,0:25:24.08:0,24,551	1/1:25,0:25:3:27,3,0	./.	./.	1/1:22,0:22:3:29,3,0	0/0:38,0:37:48.59:0,49,677	0/0:15,0:15:15.05:0,15,221	0/1:23,0:23:54.07:119,0,54	1/1:37,0:37:18.05:211,18,0	1/1:31,0:30:21.06:240,21,0	1/1:34,0:34:1.41:2,1,0	1/1:27,0:26:3:27,3,0	0/0:27,0:27:20.90:0,21,346	0/1:20,0:20:42.38:92,0,42	0/1:17,0:14:0.48:171,0,0	0/1:43,0:42:18.90:400,0,19	0/1:21,0:21:16.17:16,0,188	1/1:27,0:26:0.94:2,1,0	1/1:29,0:29:15.04:176,15,0	0/0:18,0:18:9.01:0,9,162	0/1:41,0:41:0:0,0,0	1/1:20,19:39:57.17:824,57,0	0/0:42,0:42:48:0,48,982	0/1:21,2:23:60.78:61,0,526
chr10	6114553	.	TATCTATCC	T	1907.07	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=-2.707;DP=594;FS=28.052;HRun=0;HaplotypeScore=174.9255;InbreedingCoeff=0.2601;MQ=59.35;MQ0=7;MQRankSum=-1.703;QD=6.21;ReadPosRankSum=-1.186;VQSLOD=0.9579;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:24.67:0,25,176	0/1:5,0:5:10.12:10,0,293	0/0:19,0:15:31.32:0,31,353	0/0:14,0:10:1.96:0,2,123	0/1:23,0:22:62.87:63,0,763	1/1:1,18:19:9.03:187,9,0	1/1:13,0:13:26.79:230,27,0	0/0:26,0:23:68.79:0,69,580	1/1:2,12:14:9.03:168,9,0	0/1:43,0:43:99:388,0,951	0/0:17,0:17:14.97:0,15,235	0/1:17,0:17:73.75:74,0,122	0/0:21,0:21:16.79:0,17,78	0/0:22,0:21:19.59:0,20,90	1/1:2,23:25:14.08:212,14,0	1/1:1,13:14:6.02:135,6,0	0/1:22,0:22:83.75:84,0,398	0/1:18,0:18:14.77:15,0,129	0/1:15,0:13:63.22:65,0,63	0/0:39,0:38:42.49:0,42,220	0/1:13,0:13:44.14:44,0,284	1/1:2,20:22:8.24:138,8,0	0/0:23,0:23:14:0,14,67	0/1:13,0:13:39.12:39,0,218	1/1:3,28:31:15.05:245,15,0	0/0:30,0:30:81:0,81,847	0/0:39,0:39:95.79:0,96,2294	0/0:16,0:16:44.96:0,45,1229
chr10	6114557	.	TATCC	T	4618.11	PASS	AB=0.901;AC=34;AF=0.607;AN=56;BaseQRankSum=3.159;DP=580;FS=10.641;HRun=0;HaplotypeScore=134.0941;InbreedingCoeff=0.2401;MQ=62.77;MQ0=5;MQRankSum=-1.189;QD=10.62;ReadPosRankSum=0.523;VQSLOD=3.6589;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:29.59:0,30,211	0/1:5,0:5:34.94:35,0,122	0/0:21,0:17:37.33:0,37,420	0/0:17,0:13:10.69:0,11,186	0/1:16,7:22:62.87:63,0,356	1/1:18,0:18:8.81:71,9,0	1/1:12,0:12:29.47:213,29,0	0/0:29,0:27:80.79:0,81,687	1/1:13,0:13:8.86:71,9,0	0/1:43,0:43:99:524,0,171	0/0:17,0:17:14.45:0,14,118	0/1:12,4:16:17.64:299,0,18	1/1:1,20:21:18.06:338,18,0	1/1:1,20:20:21.07:395,21,0	1/1:24,0:24:14.35:78,14,0	1/1:13,0:13:5.91:54,6,0	0/1:19,0:19:89.12:89,0,148	0/1:6,12:18:4.56:218,0,5	1/1:1,14:14:38.99:507,39,0	1/1:2,34:35:41.83:753,42,0	0/1:11,1:12:85.35:128,0,85	1/1:20,0:20:8.54:52,9,0	1/1:0,22:22:14.92:277,15,0	0/1:11,1:12:66.91:67,0,80	1/1:28,0:28:14.55:84,15,0	0/1:28,0:28:99:300,0,151	0/0:39,0:39:98.67:0,99,1512	0/1:16,0:16:4.05:4,0,708
chr10	6114560	.	C	CTAT	650.29	PASS	AB=0.966;AC=15;AF=0.268;AN=56;BaseQRankSum=5.708;DP=577;FS=0.594;HRun=0;HaplotypeScore=140.9663;InbreedingCoeff=0.3111;MQ=66.59;MQ0=4;MQRankSum=-4.595;QD=2.92;ReadPosRankSum=-5.339;VQSLOD=0.5818;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:26.47:0,26,302	0/0:5,0:5:14.95:0,15,122	0/0:26,0:22:57.19:0,57,823	0/0:18,0:14:29.83:0,30,393	0/0:23,0:22:34.57:0,35,322	0/1:18,0:18:12.63:24,0,13	0/0:13,0:13:26.71:0,27,218	0/0:29,0:28:81.06:0,81,1128	0/1:13,0:13:12.58:25,0,13	0/1:40,2:42:99:157,0,494	1/1:14,3:17:14.43:150,14,0	0/0:15,0:15:20.18:0,20,164	0/0:20,0:20:3.67:0,4,52	0/0:20,0:19:11.16:0,11,96	1/1:24,0:24:11.66:67,12,0	0/1:13,0:13:10.53:11,0,16	0/1:16,3:19:75.99:201,0,76	0/1:15,1:17:60.94:61,0,91	0/0:15,0:14:18.61:0,19,225	0/0:34,0:33:36.80:0,37,248	0/1:12,0:12:21.38:21,0,138	1/1:20,0:20:7.09:38,7,0	0/0:22,0:22:8.96:0,9,62	0/0:11,0:11:17.40:0,17,156	1/1:28,0:28:12.50:68,12,0	0/0:28,0:28:51.57:0,52,896	0/0:38,0:38:90.25:0,90,1430	0/0:16,0:16:45.13:0,45,731
chr10	6114618	.	T	TG	894.27	PASS	AB=0.832;AC=16;AF=0.286;AN=56;BaseQRankSum=9.232;DP=531;FS=49.501;HRun=0;HaplotypeScore=122.8692;InbreedingCoeff=-0.0344;MQ=53.61;MQ0=0;MQRankSum=-7.690;QD=3.08;ReadPosRankSum=2.421;VQSLOD=1.0903;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:8,1:9:9.03:0,9,126	0/1:6,3:9:35.91:36,0,44	0/0:12,0:11:26.58:0,27,411	0/0:17,0:17:27.49:0,27,433	0/0:15,15:30:10.53:0,11,54	0/1:17,2:19:31.96:32,0,149	0/0:9,0:9:12.02:0,12,167	0/0:24,0:23:29.72:0,30,762	0/0:19,0:19:9.40:0,9,126	0/1:32,9:41:99:338,0,959	0/1:15,6:21:16.78:17,0,75	0/0:17,0:17:7.06:0,7,315	0/0:21,1:22:9.76:0,10,128	0/0:9,1:10:6.87:0,7,122	1/1:21,1:22:0.71:3,1,0	0/0:19,0:19:9.35:0,9,127	0/0:4,1:5:9.03:0,9,126	0/1:4,0:4:18.93:19,0,36	0/1:11,0:11:32:32,0,262	0/0:30,11:41:21.42:0,21,211	0/0:7,0:7:5.93:0,6,62	0/1:14,12:26:1.94:17,0,2	0/1:17,15:32:1.31:1,0,159	0/1:9,0:9:0:0,0,0	1/1:20,12:32:19.23:210,19,0	0/1:18,6:24:99:238,0,555	0/1:25,5:30:5.41:5,0,540	0/1:6,4:10:93.74:94,0,182
chr10	6137456	.	A	AG	120.12	PASS	AB=0.871;AC=8;AF=0.174;AN=46;BaseQRankSum=3.981;DP=289;FS=38.884;HRun=0;HaplotypeScore=56.9473;InbreedingCoeff=0.2139;MQ=104.25;MQ0=0;MQRankSum=-0.456;QD=3.75;ReadPosRankSum=-3.785;VQSLOD=0.8595;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:96.23:0,96,1293	0/1:8,0:8:15.90:16,0,186	0/0:27,0:27:49.72:0,50,1021	0/0:28,0:28:78.26:0,78,1067	0/0:10,0:10:13.27:0,13,104	./.	0/1:2,1:3:34.49:34,0,64	0/0:43,0:43:99:0,126,1746	0/0:1,2:3:0:0,0,0	0/1:7,4:11:73.66:74,0,164	0/0:3,2:5:2.96:0,3,20	1/1:0,2:2:3.01:45,3,0	./.	0/0:2,0:2:0:0,0,0	./.	1/1:0,1:1:3.01:48,3,0	./.	0/0:5,0:5:5.05:0,5,47	0/1:7,0:7:22.48:22,0,112	0/0:9,0:9:24.21:0,24,160	0/0:2,0:2:2.98:0,3,21	0/0:13,3:16:38.61:0,39,275	0/0:7,0:7:17.89:0,18,157	./.	0/0:9,0:9:27.04:0,27,312	0/0:22,0:22:66.21:0,66,906	0/0:23,0:21:66.18:0,66,895	0/0:12,0:12:35.74:0,36,428
chr10	6138654	.	TG	T	17672.96	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=10.212;DP=622;FS=2.378;HRun=1;HaplotypeScore=62.1535;InbreedingCoeff=0.9991;MQ=76.95;MQ0=0;MQRankSum=-1.367;QD=39.10;ReadPosRankSum=4.695;VQSLOD=5.4015;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:57:99:0,172,2680	1/1:0,10:10:30.10:420,30,0	0/0:15,0:15:41.41:0,41,532	0/0:13,0:13:30.10:0,30,446	1/1:0,30:30:90.30:1259,90,0	1/1:0,25:25:75.25:1049,75,0	1/1:0,36:36:81.27:1133,81,0	0/0:31,0:31:90.26:0,90,1347	1/1:0,19:19:57.15:775,57,0	1/1:0,19:19:57.19:797,57,0	1/1:0,15:15:42.14:587,42,0	1/1:0,19:19:57.15:775,57,0	1/1:0,21:21:57.19:797,57,0	1/1:0,20:20:54.18:755,54,0	1/1:0,26:26:75.25:1049,75,0	1/1:0,19:19:57.19:797,57,0	1/1:0,28:28:81.27:1133,81,0	1/1:0,15:15:45.15:629,45,0	1/1:0,19:19:54.14:717,54,0	1/1:0,20:20:60.20:839,60,0	1/1:0,25:25:66.22:923,66,0	1/1:0,27:27:77.76:1015,78,0	1/1:0,15:15:42.14:588,42,0	1/1:1,25:26:69.23:965,69,0	1/1:0,18:18:48.16:672,48,0	0/0:29,0:29:63.32:0,63,1251	0/0:18,0:18:54.16:0,54,837	0/0:7,0:7:21.07:0,21,335
chr10	6139691	.	A	ATGTGTG	2114.46	PASS	AB=0.821;AC=34;AF=0.654;AN=52;BaseQRankSum=-1.589;DP=727;FS=7.931;HRun=0;HaplotypeScore=154.0619;InbreedingCoeff=0.3359;MQ=60.18;MQ0=17;MQRankSum=-4.108;QD=4.37;ReadPosRankSum=-2.159;VQSLOD=1.6757;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:34:3.01:70,3,0	0/0:8,0:14:4.50:0,4,64	./.	./.	1/1:17,0:31:0.52:16,1,0	1/1:20,0:30:8.03:126,8,0	1/1:22,0:23:8.04:78,8,0	1/1:28,0:26:7.11:33,7,0	1/1:13,7:21:4.26:143,4,0	0/1:30,0:34:35.87:36,0,46	0/0:12,0:18:7.79:0,8,105	0/0:12,0:23:8.61:0,9,70	0/0:15,0:25:8.70:0,9,108	0/1:30,0:32:27.04:27,0,143	0/1:15,0:28:13.71:159,0,14	1/1:10,10:22:9.03:277,9,0	1/1:13,1:29:9.54:175,10,0	0/1:16,0:24:27.62:28,0,37	1/1:17,0:16:6.02:34,6,0	1/1:15,12:31:11.16:260,11,0	0/0:26,0:38:5.58:0,6,201	1/1:14,6:22:6.02:135,6,0	0/0:6,0:8:3.90:0,4,63	0/0:18,0:38:12.21:0,12,105	1/1:11,9:21:3.01:90,3,0	1/1:23,0:23:20.48:325,20,0	1/1:14,0:19:5.45:84,5,0	1/1:11,0:9:5.44:183,5,0
chr10	6139912	.	CAAAA	C	11488.52	PASS	AB=0.613;AC=43;AF=0.768;AN=56;BaseQRankSum=-8.661;DP=515;FS=12.624;HRun=13;HaplotypeScore=100.5807;InbreedingCoeff=0.9028;MQ=70.69;MQ0=1;MQRankSum=-0.488;QD=29.31;ReadPosRankSum=5.551;VQSLOD=2.3083;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:35:78.21:0,78,1012	1/1:0,10:10:27.07:395,27,0	0/0:13,0:9:15.79:0,16,192	0/0:18,0:17:22.49:0,22,229	1/1:1,25:26:56.89:780,57,0	1/1:1,13:14:27.03:395,27,0	1/1:3,14:17:33.06:483,33,0	0/0:12,0:25:60.07:0,60,757	1/1:1,13:14:27.06:395,27,0	1/1:4,19:23:57.12:833,57,0	1/1:3,19:22:48.08:702,48,0	1/1:1,15:16:45.14:658,45,0	1/1:5,16:21:45.08:657,45,0	1/1:1,16:17:33.10:483,33,0	1/1:2,12:14:30.10:439,30,0	1/1:4,16:20:36.08:526,36,0	1/1:3,18:22:42.10:594,42,0	1/1:1,13:15:33.08:463,33,0	1/1:4,6:10:18.04:261,18,0	1/1:3,24:27:50.86:719,51,0	1/1:0,16:16:36.02:499,36,0	1/1:0,11:11:29.33:375,29,0	1/1:2,9:11:21.02:307,21,0	1/1:6,14:20:36.11:527,36,0	1/1:0,26:27:69.18:989,69,0	0/1:7,1:19:8.64:9,0,341	0/0:6,0:27:60.14:0,60,730	0/0:0,0:5:15.05:0,15,186
chr10	6141389	.	GTTT	G	11353.24	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=3.203;DP=601;FS=0.788;HRun=13;HaplotypeScore=136.6101;InbreedingCoeff=0.9781;MQ=70.19;MQ0=0;MQRankSum=-1.618;QD=26.28;ReadPosRankSum=8.119;VQSLOD=2.7340;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:32:88.15:0,88,1241	1/1:1,20:22:58.47:724,58,0	0/0:17,0:16:19.57:0,20,352	0/0:11,0:8:6.02:0,6,114	1/1:8,26:34:75.12:910,75,0	1/1:3,19:23:54.08:636,54,0	1/1:2,11:13:30.07:365,30,0	0/0:29,0:34:68.37:0,68,1063	1/1:4,13:17:36.08:438,36,0	1/1:4,16:22:46.31:522,46,0	1/1:8,17:25:51.07:620,51,0	1/1:4,9:13:24.04:289,24,0	1/1:6,12:18:33.03:401,33,0	1/1:1,17:19:43.57:544,44,0	1/1:3,9:13:25.42:325,25,0	1/1:4,12:16:27.06:328,27,0	1/1:3,19:23:46.43:581,46,0	1/1:2,14:17:27.70:459,28,0	1/1:9,9:21:30.32:302,30,0	1/1:5,17:22:51.11:617,51,0	1/1:2,9:11:27.04:328,27,0	1/1:2,26:29:70.53:873,71,0	1/1:6,21:27:63.11:763,63,0	1/1:3,13:16:39.09:474,39,0	1/1:3,27:31:72.11:855,72,0	0/0:31,0:34:90.26:0,90,1550	0/0:27,0:29:72.20:0,72,1270	0/0:9,0:11:28.58:0,29,436
chr10	6142262	.	GGTGTGT	G	3165.18	PASS	AB=0.852;AC=37;AF=0.661;AN=56;BaseQRankSum=4.143;DP=599;FS=1.590;HRun=0;HaplotypeScore=135.1585;InbreedingCoeff=0.4688;MQ=62.70;MQ0=7;MQRankSum=-3.962;QD=7.82;ReadPosRankSum=2.784;VQSLOD=2.6376;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:36:33.11:0,33,563	1/1:0,3:4:12.04:224,12,0	0/0:26,0:18:1.25:0,1,3	0/0:23,0:16:3.01:0,3,41	1/1:18,3:21:2.75:61,3,0	1/1:11,5:15:5.98:59,6,0	1/1:17,1:19:8.89:140,9,0	0/0:35,0:33:5.52:0,6,64	1/1:11,7:19:18.06:346,18,0	1/1:23,6:29:8.07:176,8,0	1/1:14,2:17:6.02:103,6,0	1/1:14,9:23:11.97:203,12,0	1/1:16,11:29:24.08:449,24,0	1/1:12,8:21:12.88:204,13,0	1/1:11,14:26:26.91:389,27,0	1/1:12,4:21:27.09:433,27,0	0/1:11,9:20:32.01:50,0,32	0/1:11,2:13:73.90:108,0,74	0/0:23,0:22:0.47:0,0,1	1/1:19,8:27:15:216,15,0	1/1:34,1:33:2.96:20,3,0	1/1:13,4:17:0.44:1,0,0	1/1:8,5:14:9.35:82,9,0	0/1:19,0:19:52.83:53,0,85	1/1:11,4:15:2.96:20,3,0	0/0:17,0:17:21.07:0,21,477	0/0:20,0:23:22.63:0,23,495	0/0:10,0:10:6.02:0,6,121
chr10	6142617	.	G	GTGTA	51493.60	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-11.751;DP=1286;FS=6.914;HRun=0;HaplotypeScore=278.7290;InbreedingCoeff=0.8899;MQ=53.52;MQ0=24;MQRankSum=7.447;QD=43.42;ReadPosRankSum=8.146;VQSLOD=4.0623;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:24,22:45:53.64:1188,54,0	1/1:1,10:11:17.93:420,18,0	0/0:44,0:28:58.23:0,58,973	0/0:55,0:29:74.33:0,74,1157	1/1:4,27:33:43.47:1212,43,0	1/1:3,28:31:35.98:971,36,0	1/1:5,27:33:2.26:929,2,0	1/1:15,41:52:99:2353,117,0	1/1:5,50:57:87.80:2576,88,0	1/1:5,69:77:99:4862,204,0	1/1:3,32:37:43.58:1212,44,0	1/1:4,51:58:83.79:2255,84,0	1/1:5,60:68:90.15:2359,90,0	1/1:5,53:60:99:3063,114,0	1/1:8,71:83:99:3948,147,0	1/1:3,50:56:89.51:2359,90,0	1/1:20,20:41:13.21:1619,13,0	1/1:16,21:37:62.46:1943,62,0	1/1:9,13:21:30.83:1048,31,0	1/1:5,36:43:41.95:1440,42,0	1/1:28,43:68:99:3185,122,0	1/1:2,38:40:66.10:1770,66,0	1/1:2,38:41:63.13:1700,63,0	1/1:19,30:49:99:2515,105,0	1/1:2,25:27:45.01:1214,45,0	1/1:4,52:56:99:3707,156,0	1/1:0,26:28:45.08:1202,45,0	1/1:1,9:10:18.06:443,18,0
chr10	6142619	.	G	GTA	17411.46	PASS	AB=1.000;AC=48;AF=0.857;AN=56;BaseQRankSum=1.725;DP=1253;FS=9.236;HRun=0;HaplotypeScore=355.4705;InbreedingCoeff=0.4100;MQ=52.91;MQ0=26;MQRankSum=8.672;QD=15.14;ReadPosRankSum=14.337;VQSLOD=2.7819;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:46,0:44:19.06:327,0,19	1/1:11,0:11:12.98:142,13,0	0/0:46,0:27:56.86:0,57,793	0/0:57,0:30:79.63:0,80,1020	1/1:31,0:31:44.19:434,44,0	1/1:29,0:29:34.65:346,35,0	1/1:34,0:33:12.67:318,13,0	0/1:59,0:49:37.21:621,0,37	1/1:57,0:57:64.78:887,65,0	1/1:74,2:76:99:1728,153,0	1/1:36,1:36:42.73:433,43,0	1/1:55,0:54:83.86:801,84,0	1/1:67,2:68:27.34:767,27,0	1/1:59,1:60:91.46:1065,91,0	1/1:77,1:80:99:1380,124,0	1/1:51,0:51:76.65:826,77,0	0/1:43,0:42:13.76:497,0,14	1/1:35,0:35:13.90:591,14,0	0/1:22,0:17:14.15:300,0,14	1/1:41,0:41:20.71:482,21,0	1/1:68,0:65:79.27:1070,79,0	1/1:37,0:37:64.27:625,64,0	1/1:39,0:39:62.97:609,63,0	1/1:49,0:49:57.32:854,57,0	1/1:27,0:27:43.54:433,44,0	1/1:55,0:54:99:1274,106,0	1/1:28,0:27:24.38:403,24,0	1/1:9,1:10:18.03:198,18,0
chr10	6143230	.	C	CAT	29563.64	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=12.016;DP=1085;FS=3.638;HRun=0;HaplotypeScore=207.3978;InbreedingCoeff=0.9521;MQ=58.99;MQ0=23;MQRankSum=1.233;QD=36.77;ReadPosRankSum=5.569;VQSLOD=5.2491;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:49:99:0,129,1914	1/1:1,20:21:45.15:905,45,0	0/0:51,0:15:29.37:0,29,214	0/0:54,0:16:0.21:0,0,144	1/1:1,36:38:69.08:1395,69,0	1/1:1,31:32:57.20:1155,57,0	1/1:5,40:48:69.24:1397,69,0	0/0:39,0:38:63.31:0,63,1195	1/1:2,27:33:47.30:1133,47,0	1/1:1,46:49:99:2484,138,0	1/1:1,28:30:36.79:951,37,0	1/1:1,36:37:57.09:1154,57,0	1/1:0,28:29:54.19:1091,54,0	1/1:0,50:51:81.28:1640,81,0	1/1:2,48:52:63.20:1276,63,0	1/1:0,36:37:81.28:1641,81,0	1/1:15,18:33:93.14:1593,93,0	1/1:11,10:21:45.45:673,45,0	1/1:2,15:17:30.99:600,31,0	1/1:2,36:40:62.98:1276,63,0	1/1:25,49:74:99:3557,191,0	1/1:1,34:36:63.22:1276,63,0	1/1:2,46:49:70.54:1627,71,0	1/1:2,44:47:86.51:1708,87,0	1/1:1,29:30:51.18:1032,51,0	0/0:43,0:43:99:0,126,1854	0/0:32,0:32:87.11:0,87,1242	0/0:11,0:10:29.98:0,30,333
chr10	6145053	.	CCT	C	14877.15	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-5.465;DP=470;FS=12.219;HRun=0;HaplotypeScore=71.4840;InbreedingCoeff=0.9579;MQ=73.52;MQ0=15;MQRankSum=-10.388;QD=35.42;ReadPosRankSum=4.706;VQSLOD=6.4896;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,14:15:39.13:571,39,0	1/1:2,9:10:24.08:353,24,0	0/0:22,0:20:45.64:0,46,966	0/0:28,0:26:78.27:0,78,1447	1/1:1,11:12:24.08:353,24,0	1/1:0,19:19:51.17:748,51,0	1/1:0,14:14:36.12:530,36,0	1/1:2,29:31:81.26:1169,81,0	1/1:1,14:15:39.13:572,39,0	1/1:0,17:17:45.15:659,45,0	1/1:3,14:15:26.89:397,27,0	1/1:2,16:16:45.15:662,45,0	1/1:1,11:11:27.09:397,27,0	1/1:2,12:13:33.11:485,33,0	1/1:0,14:14:36.12:530,36,0	1/1:1,7:8:21.07:309,21,0	1/1:2,20:22:63.21:922,63,0	1/1:2,8:8:18.06:265,18,0	1/1:0,18:18:54.15:748,54,0	1/1:3,17:20:39.13:573,39,0	1/1:3,7:10:21.07:309,21,0	1/1:0,19:19:51.17:750,51,0	1/1:1,15:16:33.11:485,33,0	1/1:2,8:10:12.04:177,12,0	1/1:2,20:21:51.17:750,51,0	1/1:1,18:18:54.17:775,54,0	1/1:4,26:29:84.26:1212,84,0	1/1:2,5:5:12.04:177,12,0
chr10	6145056	.	CTA	C	7505.49	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=3.468;DP=463;FS=6.724;HRun=0;HaplotypeScore=95.5264;InbreedingCoeff=0.8390;MQ=75.18;MQ0=15;MQRankSum=-11.127;QD=18.22;ReadPosRankSum=6.625;VQSLOD=4.3292;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:15:38.82:309,39,0	1/1:11,0:10:1.93:170,2,0	0/0:20,1:19:31.05:0,31,1021	0/0:30,0:27:81.24:0,81,1582	1/1:11,0:11:23.88:192,24,0	1/1:20,0:20:28.65:365,29,0	1/1:14,0:14:35.74:270,36,0	1/1:29,0:29:76.47:514,76,0	1/1:15,0:15:17.85:289,18,0	1/1:17,0:17:44.37:314,44,0	1/1:16,0:14:26.80:240,27,0	1/1:18,0:16:44.77:359,45,0	1/1:12,0:11:26.90:215,27,0	1/1:13,0:12:32.95:283,33,0	1/1:15,0:15:14.91:275,15,0	1/1:7,0:7:20.90:167,21,0	1/1:21,1:22:62.61:499,63,0	1/1:10,0:8:17.87:133,18,0	1/1:19,0:19:26.53:294,27,0	1/1:17,1:18:22.73:290,23,0	1/1:8,0:8:20.77:144,21,0	1/1:20,0:20:28.84:394,29,0	1/1:16,1:17:10.87:252,11,0	1/1:8,0:8:11.89:86,12,0	1/1:21,0:20:30.74:376,31,0	1/1:20,0:19:25.79:351,26,0	1/1:28,1:28:79.98:644,80,0	1/1:7,0:5:11.86:81,12,0
chr10	6145569	.	G	GA	2039.49	PASS	AB=0.946;AC=11;AF=0.196;AN=56;BaseQRankSum=-8.283;DP=657;FS=2.522;HRun=11;HaplotypeScore=78.1275;InbreedingCoeff=0.6448;MQ=69.76;MQ0=2;MQRankSum=-0.132;QD=11.46;ReadPosRankSum=-1.933;VQSLOD=3.0834;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:46:99:0,102,757	0/0:6,0:6:14.94:0,15,116	0/0:15,1:13:13.95:0,14,98	0/1:8,0:8:11.48:11,0,46	0/0:24,0:25:52.80:0,53,400	0/0:17,0:18:46.85:0,47,352	0/0:30,2:33:27.81:0,28,572	1/1:15,17:33:5.51:415,6,0	0/0:27,0:29:60.75:0,61,453	0/0:29,1:31:55.27:0,55,601	0/0:22,0:24:66.61:0,67,499	0/0:18,0:18:38.77:0,39,297	0/0:19,0:20:43.72:0,44,330	0/0:30,0:31:62.21:0,62,506	0/0:18,1:22:21.43:0,21,327	0/0:24,0:25:60.54:0,61,447	0/0:24,0:24:59.65:0,60,454	0/0:19,0:19:38.81:0,39,302	0/0:14,0:14:26.86:0,27,209	0/1:26,3:29:12.75:13,0,395	0/0:11,0:12:31.90:0,32,235	0/0:24,1:26:31.34:0,31,414	0/1:24,2:27:8.09:8,0,301	0/0:20,1:21:23.30:0,23,359	0/0:18,0:18:47.81:0,48,372	1/1:5,28:35:83.77:802,84,0	1/1:4,24:29:56.28:603,56,0	1/1:6,10:16:36.04:352,36,0
chr10	6146391	.	GT	G	19935.92	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=2.659;DP=665;FS=6.057;HRun=3;HaplotypeScore=112.3376;InbreedingCoeff=0.9993;MQ=84.35;MQ0=0;MQRankSum=-9.995;QD=32.10;ReadPosRankSum=6.995;VQSLOD=3.7541;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,34:36:81.20:984,81,0	1/1:0,10:10:30.09:371,30,0	0/0:20,0:20:54.12:0,54,736	0/0:24,0:24:63.01:0,63,774	1/1:1,20:21:42.09:500,42,0	1/1:0,19:19:48.11:577,48,0	1/1:0,32:32:78.20:948,78,0	1/1:2,17:19:51.15:618,51,0	1/1:0,31:31:90.07:1074,90,0	1/1:2,30:32:90.26:1081,90,0	1/1:0,12:12:30.09:371,30,0	1/1:3,25:28:69.22:854,69,0	1/1:1,27:28:72.23:891,72,0	1/1:0,19:19:54.17:666,54,0	1/1:0,27:27:75.24:928,75,0	1/1:0,27:27:78.20:948,78,0	1/1:0,22:22:60.19:743,60,0	1/1:0,26:26:72.23:891,72,0	1/1:2,15:17:45.11:531,45,0	1/1:0,19:19:57.18:705,57,0	1/1:0,48:48:99:1597,129,0	1/1:1,23:24:57.18:705,57,0	1/1:0,15:15:32.84:381,33,0	1/1:0,22:22:48.15:594,48,0	1/1:0,26:26:66.21:817,66,0	1/1:1,19:20:60.16:713,60,0	1/1:0,27:27:78.12:927,78,0	1/1:0,14:14:42.13:519,42,0
chr10	6146523	.	ACACACACACATG	A	4018.09	PASS	AB=0.938;AC=13;AF=0.232;AN=56;BaseQRankSum=-10.233;DP=772;FS=0.495;HRun=0;HaplotypeScore=354.3776;InbreedingCoeff=0.1135;MQ=56.47;MQ0=11;MQRankSum=-6.059;QD=17.10;ReadPosRankSum=-2.449;VQSLOD=1.1786;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:22:19.58:20,0,219	0/0:17,0:17:51.04:0,51,1245	0/0:41,0:13:8.06:0,8,206	0/0:32,0:13:13.57:0,14,218	0/0:22,0:22:21.07:0,21,634	0/1:24,0:24:73.87:74,0,1015	0/0:33,0:33:53.90:0,54,1595	1/1:5,10:15:27.02:381,27,0	0/0:34,0:34:62.97:0,63,2028	0/1:28,0:28:10:10,0,1787	0/0:24,0:24:48.16:0,48,1643	0/0:33,0:33:57.20:0,57,1873	0/0:36,0:36:74.91:0,75,2516	0/0:31,0:31:50.72:0,51,1648	0/0:38,0:38:93.25:0,93,2711	0/1:30,0:30:10.20:10,0,1422	0/0:43,0:43:36.74:0,37,2558	0/1:18,0:18:33:33,0,727	0/1:14,0:13:47.19:47,0,775	0/1:25,0:25:4.02:4,0,1583	0/0:48,0:48:60.20:0,60,1876	0/0:18,0:18:48.07:0,48,1091	0/0:19,0:19:51.13:0,51,1439	0/0:40,0:40:54.18:0,54,1648	0/0:28,0:28:54.19:0,54,1763	0/1:13,13:26:99:1552,0,179	1/1:5,21:26:45.15:1603,45,0	0/1:5,2:7:25.84:284,0,26
chr10	6146531	.	ACATG	A	7524.91	PASS	AB=1.000;AC=51;AF=0.911;AN=56;BaseQRankSum=-0.428;DP=777;FS=0.908;HRun=0;HaplotypeScore=250.1589;InbreedingCoeff=0.6555;MQ=53.30;MQ0=11;MQRankSum=0.185;QD=10.60;ReadPosRankSum=3.035;VQSLOD=4.0723;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:18,6:24:1.83:274,2,0	1/1:14,3:17:21.70:403,22,0	0/0:39,0:7:9.50:0,10,163	0/0:28,0:9:16.58:0,17,211	1/1:20,1:21:12.25:82,12,0	1/1:18,5:23:11.66:338,12,0	1/1:28,1:29:16.77:122,17,0	1/1:12,0:12:27:279,27,0	1/1:35,1:36:29.13:120,29,0	1/1:30,3:33:72.51:790,73,0	1/1:26,1:27:19.94:42,20,0	1/1:32,2:34:27.20:161,27,0	1/1:36,1:37:28.07:113,28,0	1/1:28,2:30:24.38:154,24,0	1/1:33,3:36:55.95:448,56,0	1/1:27,3:30:37.30:321,37,0	1/1:42,2:44:40.75:216,41,0	1/1:20,1:21:8.84:128,9,0	1/1:12,1:12:23.77:245,24,0	1/1:26,1:27:33.72:541,34,0	1/1:47,3:50:29.02:165,29,0	1/1:20,2:22:48.93:520,49,0	1/1:19,3:22:17.70:363,18,0	1/1:38,5:43:26.83:264,27,0	1/1:25,2:27:29.15:197,29,0	1/1:24,0:24:63.12:695,63,0	1/1:24,0:24:45.03:460,45,0	0/1:4,0:4:8.12:83,0,8
chr10	6146533	.	ATG	A	19792.60	PASS	AB=0.842;AC=49;AF=0.875;AN=56;BaseQRankSum=-1.504;DP=772;FS=15.518;HRun=0;HaplotypeScore=183.4873;InbreedingCoeff=0.5083;MQ=52.90;MQ0=11;MQRankSum=0.887;QD=28.00;ReadPosRankSum=4.360;VQSLOD=5.0924;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,5:24:11.69:221,12,0	1/1:11,7:18:54.12:760,54,0	0/0:39,1:8:6.53:0,7,238	0/0:25,0:7:16.55:0,17,181	1/1:1,19:20:21.07:327,21,0	1/1:13,10:23:46.67:642,47,0	1/1:3,25:28:45.78:771,46,0	0/1:11,0:11:9.97:235,0,10	1/1:1,34:35:63.20:1002,63,0	1/1:3,29:32:96.20:1347,96,0	1/1:2,25:27:48.16:783,48,0	1/1:2,31:33:57.16:879,57,0	1/1:1,35:36:75.13:1181,75,0	1/1:2,27:29:50.48:781,50,0	1/1:14,24:38:99:1548,102,0	1/1:14,17:31:63.20:968,63,0	1/1:5,38:43:51.25:1207,51,0	0/1:2,19:21:8.72:353,0,9	1/1:2,13:14:39.10:559,39,0	1/1:17,10:27:73.76:1076,74,0	1/1:7,42:49:48.72:868,49,0	1/1:15,7:22:60.18:904,60,0	1/1:11,10:21:55.70:809,56,0	1/1:5,38:43:54.11:765,54,0	1/1:2,25:27:54.15:831,54,0	1/1:16,8:24:68.22:654,68,0	1/1:23,0:23:43.74:250,44,0	0/1:7,0:7:3.89:70,0,4
chr10	6146626	.	TGTGCAC	T	132.35	PASS	AB=0.861;AC=2;AF=0.036;AN=56;BaseQRankSum=-0.465;DP=721;FS=33.946;HRun=0;HaplotypeScore=337.7410;InbreedingCoeff=-0.0527;MQ=51.18;MQ0=1;MQRankSum=-0.826;QD=2.32;ReadPosRankSum=-4.967;VQSLOD=0.4967;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:36.37:0,36,886	0/0:8,0:8:21.07:0,21,530	0/0:33,0:25:37.20:0,37,1724	0/0:25,0:19:45.76:0,46,1461	0/0:23,0:23:1.35:0,1,475	0/0:22,0:22:36.84:0,37,937	0/0:29,0:29:9.90:0,10,148	0/1:24,15:39:99:200,0,2014	0/0:33,0:33:49:0,49,1142	0/0:36,0:36:87.21:0,87,2388	0/0:21,0:21:19.59:0,20,869	0/0:36,0:36:43.42:0,43,1093	0/0:30,0:30:24.47:0,24,1340	0/0:33,0:33:59.98:0,60,1189	0/0:37,0:37:62:0,62,1457	0/0:28,0:28:47.51:0,48,1154	0/1:18,0:18:20.26:20,0,636	0/0:18,0:18:38.84:0,39,1042	0/0:26,0:26:57.04:0,57,2239	0/0:18,0:18:18.99:0,19,427	0/0:29,0:29:17.82:0,18,481	0/0:29,0:29:42.82:0,43,1152	0/0:14,0:14:11.01:0,11,621	0/0:28,0:28:7.19:0,7,428	0/0:12,0:12:21.06:0,21,492	0/0:40,0:40:71.73:0,72,2588	0/0:20,0:20:43.70:0,44,1279	0/0:10,0:10:24.08:0,24,702
chr10	6146632	.	C	CACACATATACACACAT	70468.04	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-6.793;DP=942;FS=24.945;HRun=0;HaplotypeScore=274.9366;InbreedingCoeff=0.9313;MQ=50.29;MQ0=1;MQRankSum=-7.807;QD=80.72;ReadPosRankSum=5.868;VQSLOD=3.3237;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,12:38:24.08:1861,24,0	1/1:2,5:14:15.05:1164,15,0	0/0:39,0:29:40.42:0,40,1275	0/0:30,0:24:43.68:0,44,1084	1/1:4,13:30:30.10:2324,30,0	1/1:1,15:32:39.13:3027,39,0	1/1:3,8:44:6.02:465,6,0	1/1:33,0:33:75.20:3220,75,0	1/1:3,18:39:48.16:3725,48,0	1/1:2,12:42:87.96:4103,88,0	1/1:15,10:25:53.78:3351,54,0	1/1:5,17:54:41.47:3251,41,0	1/1:26,10:37:75.14:4327,75,0	1/1:2,17:46:54.19:4169,54,0	1/1:2,23:53:60.21:4654,60,0	1/1:3,14:41:38.16:3025,38,0	1/1:17,5:22:33.08:1994,33,0	1/1:22,2:24:50.98:2270,51,0	1/1:25,5:30:71.87:3129,72,0	1/1:1,10:21:21.07:1629,21,0	1/1:33,3:37:25.88:1580,26,0	1/1:2,13:39:36.12:2791,36,0	1/1:15,6:21:33.05:1722,33,0	1/1:34,2:36:32.91:1742,33,0	1/1:0,7:24:21.07:1630,21,0	1/1:3,18:48:99:5405,99,0	1/1:22,6:28:51.13:2732,51,0	1/1:3,4:15:18.05:1179,18,0
chr10	6147655	.	CA	C	1595.78	PASS	AB=0.901;AC=28;AF=0.500;AN=56;BaseQRankSum=4.366;DP=623;FS=0.000;HRun=1;HaplotypeScore=157.0713;InbreedingCoeff=0.2146;MQ=61.94;MQ0=20;MQRankSum=-4.067;QD=3.64;ReadPosRankSum=1.908;VQSLOD=0.0863;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:24:6.90:19,7,0	0/0:6,0:6:4.54:0,5,53	0/0:37,0:15:45.12:0,45,542	0/0:35,0:23:57.52:0,58,694	0/1:22,0:21:24.04:24,0,67	1/1:14,1:14:11.29:64,11,0	0/1:17,1:18:23.17:73,0,23	1/1:24,0:23:3.50:58,4,0	1/1:10,14:28:49.88:382,50,0	0/0:20,0:19:33.86:0,34,179	0/0:6,1:7:5.56:0,6,61	0/1:21,4:25:64.35:64,0,160	0/0:21,0:21:16.84:0,17,157	0/1:20,2:23:53.81:54,0,112	1/1:15,12:30:51.24:294,51,0	1/1:10,6:17:29.45:180,29,0	0/1:13,4:19:41.73:50,0,42	0/1:17,1:18:5.89:6,0,182	1/1:22,1:23:10.51:111,11,0	1/1:11,2:13:9.64:24,10,0	0/1:43,1:43:14.61:15,0,81	0/1:15,11:27:13.47:147,0,13	0/0:12,0:12:13.71:0,14,152	0/0:32,1:32:2.11:0,2,477	1/1:10,6:18:30.31:161,30,0	0/1:32,0:32:54.87:55,0,94	0/1:15,1:16:0.88:1,0,70	0/0:13,0:12:10.28:0,10,72
chr10	6147657	.	CAA	C	10142.16	PASS	AB=0.943;AC=51;AF=0.911;AN=56;BaseQRankSum=3.545;DP=608;FS=3.745;HRun=2;HaplotypeScore=136.3963;InbreedingCoeff=0.7075;MQ=63.98;MQ0=20;MQRankSum=-2.745;QD=18.99;ReadPosRankSum=4.179;VQSLOD=3.0199;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:23:41.78:333,42,0	1/1:5,0:5:11.99:101,12,0	0/0:39,0:17:47.45:0,47,419	0/0:35,0:24:42.27:0,42,485	1/1:16,4:19:48:464,48,0	1/1:14,0:13:29.90:245,30,0	1/1:17,0:18:28.31:378,28,0	1/1:26,0:25:68.47:601,68,0	1/1:16,0:28:74.46:598,74,0	1/1:2,15:17:42.67:365,43,0	1/1:1,6:8:5.81:64,6,0	1/1:0,18:22:39.08:495,39,0	1/1:14,5:19:33.46:481,33,0	1/1:15,4:21:47.14:457,47,0	1/1:20,0:31:80.83:683,81,0	1/1:10,0:16:47.97:408,48,0	1/1:15,0:19:44.74:343,45,0	1/1:12,5:17:45:469,45,0	1/1:22,0:23:61.41:497,61,0	1/1:12,0:13:29.98:256,30,0	1/1:3,39:42:15.04:202,15,0	1/1:18,0:27:50.51:413,51,0	1/1:12,1:13:8.78:171,9,0	0/1:31,1:32:85.10:468,0,85	1/1:12,0:18:50.94:430,51,0	1/1:26,3:29:76.67:724,77,0	1/1:0,13:14:17.86:240,18,0	1/1:13,0:12:32.88:257,33,0
chr10	6148487	.	T	TC	12451.06	PASS	AB=0.938;AC=54;AF=0.964;AN=56;BaseQRankSum=0.030;DP=738;FS=0.763;HRun=1;HaplotypeScore=282.4264;InbreedingCoeff=-0.0369;MQ=76.89;MQ0=0;MQRankSum=-6.085;QD=16.87;ReadPosRankSum=6.775;VQSLOD=4.3581;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:41,0:41:84.06:597,84,0	1/1:10,0:10:7.94:183,8,0	0/1:22,0:22:6.40:196,0,6	0/1:24,4:28:99:244,0,111	1/1:35,0:35:42.41:416,42,0	1/1:29,0:29:68.33:481,68,0	1/1:18,0:18:53.23:358,53,0	1/1:37,0:37:75.68:576,76,0	1/1:24,0:24:37.84:437,38,0	1/1:26,0:26:76.18:478,76,0	1/1:22,0:22:27.70:316,28,0	1/1:28,0:28:77.10:550,77,0	1/1:32,0:32:66.46:622,66,0	1/1:39,0:39:99:745,102,0	1/1:32,0:32:64.37:604,64,0	1/1:28,0:28:77.38:577,77,0	1/1:27,0:27:54.39:497,54,0	1/1:23,0:23:68.39:498,68,0	1/1:21,0:21:56.02:363,56,0	1/1:28,0:28:41.51:404,42,0	1/1:27,0:27:64.04:435,64,0	1/1:30,0:30:39.51:389,40,0	1/1:22,0:22:13.99:255,14,0	1/1:23,0:23:47.31:324,47,0	1/1:22,0:22:65.39:485,65,0	1/1:28,0:28:80.28:601,80,0	1/1:22,0:22:62.76:498,63,0	1/1:14,0:14:41.78:322,42,0
chr10	6149121	.	G	GCCTCTC	497.79	PASS	AB=0.700;AC=15;AF=0.833;AN=18;BaseQRankSum=-2.422;DP=35;FS=0.000;HRun=0;HaplotypeScore=12.1589;MQ=112.01;MQ0=2;MQRankSum=-0.673;QD=23.70;ReadPosRankSum=-1.614;VQSLOD=2.4751;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/1:3,1:7:14.09:203,0,14	0/0:3,0:1:3.01:0,3,32	1/1:0,0:4:2.97:20,3,0	./.	./.	1/1:2,0:2:3.01:48,3,0	./.	./.	./.	./.	./.	./.	./.	1/1:0,0:1:3.01:98,3,0	./.	1/1:0,0:2:3.01:40,3,0	1/1:3,0:2:5.99:86,6,0	./.	./.	1/1:1,0:1:3.01:34,3,0	1/1:1,0:1:3.01:52,3,0	./.	./.	./.	./.	./.
chr10	6165175	.	C	CA	29244.81	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=10.962;DP=814;FS=4.104;HRun=1;HaplotypeScore=187.0995;InbreedingCoeff=0.9998;MQ=85.98;MQ0=0;MQRankSum=-10.232;QD=41.42;ReadPosRankSum=3.476;VQSLOD=4.2309;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,150,1948	1/1:2,10:12:30.06:425,30,0	0/0:27,0:27:72.22:0,72,911	0/0:28,0:28:75.24:0,75,968	1/1:3,25:28:69.23:1034,69,0	1/1:2,26:28:78.18:1119,78,0	1/1:0,31:31:90.26:1324,90,0	1/1:1,27:28:84.25:1216,84,0	1/1:1,32:33:90.30:1345,90,0	1/1:0,33:33:99:1465,99,0	1/1:1,21:22:60.20:899,60,0	1/1:0,24:24:66.22:989,66,0	1/1:1,18:19:57.16:830,57,0	1/1:2,37:39:99:1612,108,0	1/1:0,26:26:78.26:1169,78,0	1/1:2,25:27:72.24:1079,72,0	1/1:0,26:26:69.23:1034,69,0	1/1:4,21:25:75.15:1052,75,0	1/1:6,20:26:72.15:1006,72,0	1/1:0,31:31:90.26:1324,90,0	1/1:2,52:54:99:2293,154,0	1/1:3,28:31:84.24:1234,84,0	1/1:1,21:22:57.19:854,57,0	1/1:0,32:32:84.28:1259,84,0	1/1:1,22:23:66.22:975,66,0	1/1:2,35:37:99:1598,108,0	1/1:1,28:29:87.29:1301,87,0	1/1:0,20:20:54.18:809,54,0
chr10	6166190	.	C	CACACAT	31711.87	PASS	AB=0.778;AC=49;AF=0.875;AN=56;BaseQRankSum=9.447;DP=859;FS=1.870;HRun=0;HaplotypeScore=358.2010;InbreedingCoeff=0.7845;MQ=43.62;MQ0=3;MQRankSum=-9.143;QD=45.24;ReadPosRankSum=-0.988;VQSLOD=3.6417;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,123,2560	1/1:7,10:17:30.05:907,30,0	0/0:52,0:37:84.05:0,84,1620	0/0:52,0:39:88.71:0,89,1643	1/1:13,14:27:17.09:421,17,0	1/1:12,17:29:51.17:1483,51,0	1/1:22,14:36:59.05:1422,59,0	1/1:30,5:33:47.99:900,48,0	1/1:18,19:37:69.17:1888,69,0	1/1:20,31:53:99:3724,120,0	1/1:3,15:18:19.39:519,19,0	1/1:10,21:31:66.21:1914,66,0	1/1:11,18:29:75.17:1960,75,0	1/1:12,20:33:69.24:1858,69,0	1/1:16,26:41:93.31:2533,93,0	1/1:11,17:28:54.19:1630,54,0	1/1:10,7:17:24.08:649,24,0	1/1:10,4:14:15.01:418,15,0	1/1:19,7:23:5.73:798,6,0	1/1:7,13:20:25.21:691,25,0	1/1:21,11:30:16.39:515,16,0	1/1:15,21:37:52.66:1413,53,0	1/1:14,12:26:22.75:571,23,0	1/1:13,8:21:2.17:174,2,0	1/1:6,26:32:68.46:1937,68,0	1/1:12,10:22:54.10:1420,54,0	1/1:14,17:32:62.30:1752,62,0	0/1:5,2:7:3.58:213,0,4
chr10	6166204	.	T	TAC	18761.02	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=8.967;DP=796;FS=0.000;HRun=0;HaplotypeScore=349.3966;InbreedingCoeff=0.9546;MQ=43.65;MQ0=3;MQRankSum=-7.247;QD=29.18;ReadPosRankSum=2.524;VQSLOD=3.9165;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,119,1468	1/1:6,7:13:15.04:247,15,0	0/0:57,0:41:75.07:0,75,899	0/0:46,0:36:62.77:0,63,738	1/1:9,12:21:18.48:296,18,0	1/1:5,19:24:56.43:906,56,0	1/1:5,27:34:69.11:1155,69,0	1/1:7,21:28:63.20:1044,63,0	1/1:8,22:30:66.13:1044,66,0	1/1:8,42:51:99:2077,128,0	1/1:5,16:21:38.81:510,39,0	1/1:7,25:32:51.23:1029,51,0	1/1:8,20:27:63.03:1051,63,0	1/1:7,30:37:69.22:1053,69,0	1/1:11,31:41:90.04:1477,90,0	1/1:8,17:25:42.11:687,42,0	1/1:5,13:18:24.25:354,24,0	1/1:7,2:8:18.03:296,18,0	1/1:10,12:18:33.11:549,33,0	1/1:5,10:15:20.32:287,20,0	1/1:13,24:35:13.58:226,14,0	1/1:6,23:29:56.92:877,57,0	1/1:4,15:19:29.83:380,30,0	1/1:5,16:21:15.96:245,16,0	1/1:7,24:31:57.03:870,57,0	1/1:3,19:23:63.20:1012,63,0	1/1:3,24:27:57.19:936,57,0	1/1:1,3:4:9.03:153,9,0
chr10	6166268	.	GCACACACACGCACACACACA	G	10359.37	PASS	AB=0.907;AC=44;AF=0.786;AN=56;BaseQRankSum=3.340;DP=670;FS=0.478;HRun=0;HaplotypeScore=346.0319;InbreedingCoeff=0.3175;MQ=43.78;MQ0=23;MQRankSum=-2.105;QD=19.85;ReadPosRankSum=0.704;VQSLOD=2.7151;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:41:59.68:0,60,1865	1/1:0,7:7:8.62:209,9,0	0/0:49,0:24:25.68:0,26,433	0/0:55,0:27:38:0,38,675	1/1:4,12:16:20.17:334,20,0	1/1:12,2:14:20.77:158,21,0	1/1:22,0:22:17.14:191,17,0	0/1:29,0:25:99:343,0,354	1/1:19,4:22:29.83:449,30,0	1/1:31,6:35:84.81:1684,85,0	1/1:17,3:22:23.75:220,24,0	1/1:8,15:22:30.01:717,30,0	1/1:7,12:19:32.82:817,33,0	1/1:21,7:28:20.66:436,21,0	1/1:13,30:44:60:1630,60,0	1/1:9,13:25:39.09:1054,39,0	1/1:12,2:14:14.87:385,15,0	1/1:10,0:9:20.80:168,21,0	0/1:10,8:15:22.68:591,0,23	1/1:3,13:19:18.99:284,19,0	1/1:33,1:31:9.60:131,10,0	1/1:7,11:18:13.26:95,13,0	1/1:17,3:21:8.98:75,9,0	1/1:20,1:21:2.96:65,3,0	0/1:6,3:9:9.07:213,0,9	0/1:18,0:18:37.78:38,0,989	0/1:21,0:21:44.74:45,0,1476	0/1:5,0:5:27.45:27,0,131
chr10	6166272	.	ACACACG	A	5523.13	PASS	AB=0.833;AC=49;AF=0.875;AN=56;BaseQRankSum=4.810;DP=651;FS=12.997;HRun=0;HaplotypeScore=246.6646;InbreedingCoeff=0.6522;MQ=42.46;MQ0=24;MQRankSum=-2.111;QD=10.89;ReadPosRankSum=2.284;VQSLOD=2.3808;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:44:61.80:0,62,697	1/1:7,0:7:5.92:39,6,0	0/0:45,0:21:11.99:0,12,280	0/0:52,0:25:38.23:0,38,273	1/1:16,0:16:7.41:53,7,0	1/1:13,0:13:20.70:139,21,0	1/1:19,0:19:17.73:152,18,0	1/1:28,0:23:46.82:514,47,0	1/1:24,0:23:28.48:208,28,0	1/1:37,0:34:84.80:855,85,0	1/1:23,0:22:20.67:159,21,0	1/1:23,0:22:26.86:269,27,0	1/1:19,0:18:29.72:237,30,0	1/1:25,0:25:35.77:250,36,0	1/1:42,0:42:47.88:527,48,0	1/1:23,0:23:29.84:318,30,0	1/1:13,0:13:14.87:149,15,0	1/1:11,0:10:20.79:146,21,0	1/1:17,0:14:9.22:247,9,0	1/1:17,0:17:6.83:39,7,0	1/1:37,0:33:14.28:108,14,0	1/1:17,0:16:10.33:76,10,0	1/1:21,0:20:8.89:74,9,0	1/1:19,0:19:2.65:25,3,0	1/1:10,0:10:13.06:106,13,0	1/1:18,1:19:11.10:378,11,0	1/1:20,2:22:43.39:361,43,0	0/1:4,1:5:21.05:96,0,21
chr10	6166274	.	ACACG	A	5515.23	PASS	AB=0.857;AC=49;AF=0.875;AN=56;BaseQRankSum=4.107;DP=634;FS=9.087;HRun=0;HaplotypeScore=225.2341;InbreedingCoeff=0.6591;MQ=42.53;MQ0=24;MQRankSum=-1.684;QD=11.21;ReadPosRankSum=1.365;VQSLOD=3.3245;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:45:37.41:0,37,521	1/1:7,0:7:5.80:38,6,0	0/0:44,0:21:11.99:0,12,280	0/0:49,0:23:38.23:0,38,273	1/1:16,0:16:5.80:50,6,0	1/1:11,1:12:20.70:139,21,0	1/1:18,0:18:17.47:152,17,0	1/1:26,1:22:65.92:597,66,0	1/1:21,2:22:28.47:194,28,0	1/1:34,1:32:84.78:757,85,0	1/1:21,2:22:20.83:159,21,0	1/1:21,2:22:26.85:227,27,0	1/1:18,1:18:29.05:206,29,0	1/1:22,2:24:35.30:236,35,0	1/1:38,3:41:48.33:429,48,0	1/1:21,2:23:29.54:245,30,0	1/1:13,0:13:14.87:121,15,0	1/1:12,0:11:21.26:146,21,0	1/1:16,0:13:21.66:221,22,0	1/1:17,0:17:6.10:37,6,0	1/1:30,3:30:12.92:105,13,0	1/1:15,1:15:9.57:74,10,0	1/1:20,0:19:9.36:75,9,0	1/1:15,2:17:2.29:25,2,0	1/1:9,1:10:13.06:92,13,0	1/1:17,1:18:50.93:541,51,0	1/1:14,9:23:46.22:568,46,0	0/1:5,1:6:16.87:82,0,17
chr10	6166288	.	A	AAAATG	5818.75	PASS	AB=0.975;AC=23;AF=0.411;AN=56;BaseQRankSum=8.869;DP=631;FS=5.353;HRun=0;HaplotypeScore=241.3815;InbreedingCoeff=-0.4397;MQ=40.60;MQ0=28;MQRankSum=-9.065;QD=13.50;ReadPosRankSum=-8.793;VQSLOD=1.5247;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:47:60.24:0,60,1137	0/1:8,0:8:56.11:87,0,56	0/0:37,0:15:32.29:0,32,739	0/0:38,0:10:30.09:0,30,593	0/1:19,0:19:99:338,0,111	0/1:11,0:11:99:135,0,264	0/1:16,0:15:99:261,0,187	0/0:26,0:19:60.17:0,60,1194	0/1:18,0:19:99:476,0,237	0/1:38,2:37:99:620,0,1047	0/1:24,0:22:99:136,0,239	0/1:23,0:22:99:337,0,244	0/1:19,0:18:99:225,0,364	0/1:20,1:21:99:250,0,498	0/1:38,0:38:99:836,0,166	0/1:24,1:25:99:687,0,193	0/1:13,1:14:99:114,0,103	0/1:12,0:12:99:112,0,379	0/1:13,0:12:99:184,0,183	1/1:19,0:19:29.07:356,29,0	0/1:32,0:30:99:142,0,194	0/1:21,0:19:90.76:168,0,91	0/1:21,0:20:12.13:12,0,74	0/1:20,0:20:99:114,0,106	1/1:9,0:9:2.52:230,3,0	0/0:20,0:19:57.20:0,57,1268	0/0:24,0:24:47.61:0,48,1032	0/0:5,0:5:8.06:0,8,127
chr10	6169435	.	T	TTCTCTCTCTC	4902.95	PASS	AB=1.000;AC=31;AF=0.554;AN=56;BaseQRankSum=9.864;DP=496;FS=17.676;HRun=0;HaplotypeScore=138.9224;InbreedingCoeff=0.1166;MQ=52.24;MQ0=10;MQRankSum=-6.681;QD=13.85;ReadPosRankSum=0.476;VQSLOD=2.7064;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:74.91:0,75,1793	0/0:3,0:3:6.02:0,6,101	0/0:33,0:18:44.29:0,44,799	0/0:42,0:14:23.72:0,24,463	0/1:27,0:26:73.98:74,0,487	1/1:13,0:12:20.94:322,21,0	1/1:14,0:13:17.77:182,18,0	0/1:27,0:25:99:164,0,621	1/1:1,13:17:12.51:419,13,0	0/1:16,0:15:99:129,0,324	0/1:15,0:12:31.09:31,0,178	0/0:18,0:15:1.07:0,1,283	0/1:18,0:17:99:290,0,229	0/1:9,0:7:99:237,0,127	1/1:2,6:16:9.50:310,10,0	1/1:2,12:19:12.98:502,13,0	1/1:19,0:18:36.19:337,36,0	0/1:5,0:4:50.29:50,0,86	1/1:17,0:16:32.65:303,33,0	1/1:3,15:23:12.72:300,13,0	0/0:6,0:5:5.97:0,6,74	1/1:3,12:16:13.74:235,14,0	0/0:10,0:8:21.01:0,21,245	0/1:13,0:13:41.25:49,0,41	1/1:22,0:20:32.95:374,33,0	0/1:19,0:19:99:353,0,340	0/1:21,0:21:94.28:94,0,196	0/1:7,0:7:57.88:147,0,58
chr10	6169436	.	A	ACTCTCTCTCTCT	7189.88	PASS	AB=1.000;AC=46;AF=0.920;AN=50;BaseQRankSum=2.850;DP=515;FS=18.755;HRun=0;HaplotypeScore=155.3754;InbreedingCoeff=0.2050;MQ=49.95;MQ0=10;MQRankSum=-3.185;QD=15.43;ReadPosRankSum=-1.198;VQSLOD=2.6743;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:0.07:0,0,1245	./.	0/1:31,0:16:7.60:8,0,72	0/1:43,0:14:6.86:7,0,84	1/1:23,0:22:11.72:260,12,0	1/1:14,0:13:17.97:263,18,0	1/1:14,0:13:8.92:115,9,0	1/1:35,0:33:36:723,36,0	1/1:16,0:15:12.04:326,12,0	1/1:17,0:16:26.95:469,27,0	1/1:16,0:13:12.01:194,12,0	1/1:19,0:16:11.96:127,12,0	1/1:18,0:17:20.99:555,21,0	1/1:9,0:7:12.04:449,12,0	1/1:16,0:15:8.21:291,8,0	1/1:19,0:19:15.52:453,16,0	1/1:18,0:17:18.02:303,18,0	1/1:6,0:5:8.98:300,9,0	1/1:20,0:18:28.72:260,29,0	1/1:23,0:23:9.03:218,9,0	./.	1/1:18,0:18:5.19:146,5,0	./.	1/1:8,0:18:3.01:109,3,0	1/1:22,0:20:9.02:176,9,0	1/1:19,0:20:38.78:902,39,0	1/1:7,14:21:6.02:210,6,0	1/1:8,0:8:12.04:328,12,0
chr10	6174126	.	CT	C	2931.32	PASS	AB=0.681;AC=42;AF=0.750;AN=56;BaseQRankSum=1.721;DP=577;FS=2.701;HRun=16;HaplotypeScore=61.5213;InbreedingCoeff=0.2178;MQ=71.77;MQ0=9;MQRankSum=0.630;QD=6.53;ReadPosRankSum=4.279;VQSLOD=2.8239;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,5:37:29.97:0,30,421	0/1:3,3:6:13.34:42,0,13	0/0:48,3:13:4.93:0,5,40	0/0:39,0:14:16.49:0,16,89	0/1:8,11:19:41.30:96,0,41	1/1:5,16:22:12.80:135,13,0	0/1:9,7:18:22.67:91,0,23	0/1:13,12:25:18.65:116,0,19	0/1:7,3:10:8.38:8,0,39	1/1:7,4:14:26.63:142,27,0	1/1:3,16:19:18.66:213,19,0	1/1:9,10:20:18.53:112,19,0	1/1:4,11:15:16.25:86,16,0	1/1:9,12:21:7.37:154,7,0	1/1:7,10:17:23.51:143,24,0	1/1:6,7:14:6:53,6,0	0/1:16,2:21:7.29:131,0,7	1/1:3,10:16:18.64:120,19,0	1/1:11,15:27:21.47:220,21,0	0/1:9,13:26:1.45:163,0,1	1/1:4,2:6:8.53:42,9,0	1/1:3,11:14:28.74:159,29,0	1/1:3,17:21:31.35:182,31,0	1/1:4,11:16:22.56:131,23,0	1/1:8,20:30:12.01:194,12,0	1/1:6,10:16:29.98:170,30,0	1/1:9,13:24:9.93:151,10,0	0/1:4,6:10:9.67:42,0,10
chr10	6176028	.	GGAGAGAGAGAGAGA	G	773.48	PASS	AB=0.856;AC=17;AF=0.315;AN=54;BaseQRankSum=5.938;DP=527;FS=27.967;HRun=0;HaplotypeScore=181.0244;InbreedingCoeff=0.3998;MQ=66.45;MQ0=5;MQRankSum=-3.272;QD=3.79;ReadPosRankSum=-2.133;VQSLOD=1.1384;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:22,7:29:2.75:53,3,0	1/1:6,0:7:4.55:30,5,0	./.	0/0:28,0:12:2.37:0,2,8	0/0:27,0:28:11.96:0,12,109	0/0:20,0:20:12.04:0,12,586	0/0:16,0:16:12.04:0,12,502	1/1:24,0:24:2.59:20,3,0	0/0:15,0:15:27.07:0,27,1292	0/0:24,0:24:6.02:0,6,118	0/1:16,0:19:2.75:3,0,133	1/1:16,0:22:6.41:45,6,0	0/1:9,0:12:5.66:6,0,143	0/1:18,0:21:30.96:31,0,303	0/0:14,0:14:12.04:0,12,450	0/0:27,0:27:33.11:0,33,1867	0/0:15,0:22:21.07:0,21,746	0/1:10,0:12:33.74:52,0,34	0/0:12,0:11:18.06:0,18,839	0/0:25,0:25:36.11:0,36,1440	0/0:10,0:10:5.99:0,6,89	0/0:16,0:16:12.04:0,12,336	0/1:10,0:11:5.54:6,0,152	0/0:13,0:15:8.98:0,9,150	0/0:22,0:22:15.04:0,15,369	1/1:14,3:17:9.01:111,9,0	1/1:18,9:28:18.53:578,19,0	0/0:11,0:11:1.25:0,1,3
chr10	6178871	.	GCA	G	7539.33	PASS	AB=0.638;AC=38;AF=0.704;AN=54;BaseQRankSum=-0.065;DP=664;FS=0.960;HRun=0;HaplotypeScore=99.4261;InbreedingCoeff=0.6275;MQ=64.14;MQ0=10;MQRankSum=-0.100;QD=14.78;ReadPosRankSum=1.786;VQSLOD=4.9403;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:28.80:0,29,1205	1/1:7,8:16:26.40:227,26,0	0/0:9,0:3:2.98:0,3,21	./.	1/1:5,16:23:28.82:361,29,0	0/1:7,11:19:13.93:265,0,14	1/1:14,18:32:27.08:309,27,0	0/0:31,0:31:12.39:0,12,196	0/1:8,16:24:3.75:276,0,4	1/1:9,13:24:47.80:504,48,0	1/1:5,9:18:23.69:233,24,0	1/1:8,13:22:32.76:337,33,0	0/1:7,14:22:10.38:321,0,10	1/1:6,19:26:39.11:446,39,0	1/1:8,4:11:15.04:170,15,0	1/1:2,12:14:21.06:240,21,0	1/1:9,20:30:44.45:470,44,0	1/1:2,19:22:26.29:374,26,0	0/1:17,9:26:7.60:316,0,8	1/1:6,19:26:53.40:553,53,0	1/1:16,23:42:53.48:536,53,0	1/1:10,12:22:33.86:361,34,0	1/1:8,17:26:20.92:239,21,0	1/1:10,17:29:44.62:454,45,0	1/1:7,22:31:45.77:546,46,0	0/0:23,1:23:7.79:0,8,398	0/0:20,0:20:42.73:0,43,510	0/0:10,0:10:25.57:0,26,244
chr10	6187396	.	G	GT	13346.41	PASS	AB=0.541;AC=41;AF=0.732;AN=56;BaseQRankSum=-15.132;DP=698;FS=14.253;HRun=8;HaplotypeScore=69.9308;InbreedingCoeff=0.9316;MQ=92.96;MQ0=0;MQRankSum=-3.080;QD=27.86;ReadPosRankSum=3.118;VQSLOD=4.2678;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:58:99:0,156,1417	1/1:0,13:13:30.05:331,30,0	0/0:37,0:36:51.37:0,51,571	0/0:27,0:27:42.01:0,42,387	1/1:3,33:36:90.27:1039,90,0	1/1:4,24:28:69.21:796,69,0	1/1:2,14:16:39.12:450,39,0	0/0:27,1:28:37.39:0,37,583	1/1:0,20:21:60.01:672,60,0	1/1:0,24:24:69.18:778,69,0	1/1:3,17:20:54.16:623,54,0	1/1:3,17:20:48.14:553,48,0	1/1:2,23:26:44.58:749,45,0	1/1:6,13:19:14.62:408,15,0	1/1:1,23:24:32.71:631,33,0	1/1:2,20:22:51.15:589,51,0	1/1:3,23:26:60.18:692,60,0	1/1:0,21:21:54.16:623,54,0	1/1:4,20:24:63.13:701,63,0	1/1:4,27:32:83.92:877,84,0	1/1:3,12:15:36.11:415,36,0	1/1:5,18:24:50.98:568,51,0	1/1:1,18:20:42.12:481,42,0	0/1:3,17:20:3.78:468,0,4	1/1:2,26:28:78.23:900,78,0	0/0:23,0:23:51.01:0,51,467	0/0:35,0:35:99:0,102,925	0/0:10,0:10:27.01:0,27,247
chr10	6188143	.	TACAC	T	858.16	PASS	AB=0.874;AC=28;AF=0.538;AN=52;BaseQRankSum=0.418;DP=437;FS=2.059;HRun=0;HaplotypeScore=77.1496;InbreedingCoeff=0.0794;MQ=70.50;MQ0=6;MQRankSum=0.217;QD=3.05;ReadPosRankSum=0.640;VQSLOD=1.2111;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:21,0:22:14.99:35,0,15	0/0:6,0:10:5.49:0,5,24	./.	./.	0/1:15,0:17:37.81:38,0,45	0/1:17,12:29:13.97:41,0,14	1/1:12,4:17:3.01:47,3,0	1/1:9,0:8:2.97:20,3,0	1/1:3,8:11:3.01:47,3,0	0/0:13,0:13:13.57:0,14,101	0/1:18,3:21:31.57:32,0,117	0/0:10,0:16:2.74:0,3,12	0/0:5,0:9:5.49:0,5,24	0/1:10,0:10:12.92:17,0,13	0/1:9,5:15:43.77:78,0,44	1/1:6,4:9:6.02:93,6,0	1/1:10,7:17:9.03:140,9,0	0/0:9,0:9:0:0,0,0	1/1:8,0:7:3:26,3,0	1/1:18,0:18:3.01:42,3,0	0/0:16,0:16:20.96:0,21,186	1/1:14,3:16:2.75:46,3,0	0/0:9,0:15:11.28:0,11,62	0/1:18,1:22:24.74:25,0,87	1/1:11,1:12:9.02:120,9,0	0/0:16,0:16:1.79:0,2,24	1/1:17,0:17:14.98:154,15,0	0/1:8,0:8:14.94:15,0,15
chr10	6189247	.	GCA	G	1364.95	PASS	AB=0.967;AC=35;AF=0.795;AN=44;BaseQRankSum=1.824;DP=531;FS=6.326;HRun=0;HaplotypeScore=66.7023;InbreedingCoeff=0.3098;MQ=74.34;MQ0=6;MQRankSum=1.624;QD=3.81;ReadPosRankSum=0.778;VQSLOD=1.1619;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:30:12.01:120,12,0	0/1:6,0:6:0:0,0,0	./.	./.	1/1:14,1:16:5.84:46,6,0	./.	1/1:23,0:23:5.88:48,6,0	./.	1/1:16,4:21:11.86:111,12,0	0/0:17,0:17:3:0,3,26	./.	1/1:8,2:10:3.01:32,3,0	1/1:16,3:19:12.03:130,12,0	1/1:15,1:18:8.69:60,9,0	1/1:18,3:24:14.70:125,15,0	1/1:12,6:20:14.70:125,15,0	1/1:18,6:26:23.72:222,24,0	0/1:16,0:17:10.72:42,0,11	./.	1/1:11,1:12:3:32,3,0	1/1:40,3:42:2.68:32,3,0	1/1:8,2:10:6.01:65,6,0	1/1:12,0:13:8.86:78,9,0	1/1:24,6:30:12.03:130,12,0	1/1:11,2:14:6.01:65,6,0	0/0:14,0:14:5.97:0,6,46	0/0:13,0:13:3.01:0,3,44	0/1:5,0:5:22.93:23,0,65
chr10	6189757	.	GA	G	5373.40	PASS	AB=0.644;AC=44;AF=0.786;AN=56;BaseQRankSum=1.602;DP=551;FS=5.434;HRun=13;HaplotypeScore=67.3992;InbreedingCoeff=-0.0619;MQ=64.50;MQ0=2;MQRankSum=-1.840;QD=9.97;ReadPosRankSum=4.022;VQSLOD=4.3635;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:12,20:33:7.58:280,0,8	0/1:2,4:6:43.44:50,0,43	0/1:20,1:13:2.64:3,0,75	0/0:11,1:5:0.25:0,0,55	0/1:7,17:24:26.08:312,0,26	1/1:7,9:18:27.90:187,28,0	1/1:1,9:10:23.86:175,24,0	1/1:4,0:30:9.24:57,9,0	1/1:1,9:10:26.84:197,27,0	1/1:13,21:34:9.03:384,9,0	0/1:8,25:33:14.19:390,0,14	1/1:4,15:19:29.81:219,30,0	1/1:2,11:13:9.65:177,10,0	0/1:6,14:21:8.63:263,0,9	1/1:2,15:17:9.58:233,10,0	1/1:1,6:9:18.98:121,19,0	1/1:5,19:24:17.97:283,18,0	1/1:11,21:32:21.49:321,21,0	0/1:10,8:17:0.40:151,0,0	1/1:9,23:32:36.37:429,36,0	1/1:3,10:13:23.68:166,24,0	0/1:9,14:25:8.73:247,0,9	1/1:5,17:22:31.30:311,31,0	0/1:4,7:11:21.81:70,0,22	0/1:6,9:15:8.35:110,0,8	1/1:5,1:17:23.33:82,23,0	1/1:2,0:22:38.69:113,39,0	1/1:0,0:8:14.26:42,14,0
chr10	6190776	.	T	TG	8319.57	PASS	AB=0.600;AC=41;AF=0.732;AN=56;BaseQRankSum=-7.560;DP=553;FS=0.894;HRun=9;HaplotypeScore=65.7488;InbreedingCoeff=0.8931;MQ=78.16;MQ0=0;MQRankSum=-3.657;QD=20.34;ReadPosRankSum=1.447;VQSLOD=5.4120;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:59.97:0,60,521	1/1:2,7:9:21.06:231,21,0	0/0:19,0:19:38:0,38,316	0/0:17,0:17:8.03:0,8,192	1/1:6,13:19:39.09:422,39,0	1/1:5,17:22:48.13:531,48,0	1/1:10,22:33:42.96:685,43,0	0/0:23,0:23:47.98:0,48,417	1/1:6,14:20:45.02:473,45,0	1/1:6,15:21:15.89:386,16,0	1/1:4,11:15:4.02:273,4,0	0/1:5,10:15:1.97:208,0,2	1/1:3,16:19:39.10:431,39,0	1/1:3,11:14:33.09:365,33,0	1/1:5,13:18:30.08:332,30,0	1/1:1,16:17:42.11:465,42,0	1/1:10,20:30:54.15:597,54,0	1/1:6,13:20:16.02:392,16,0	1/1:7,15:22:16.06:404,16,0	1/1:5,13:18:33.09:365,33,0	1/1:11,8:19:18.05:199,18,0	1/1:3,13:17:39.11:431,39,0	1/1:3,10:13:24.06:265,24,0	1/1:7,18:25:39.11:432,39,0	1/1:7,16:23:39.58:432,40,0	0/0:19,0:19:35.98:0,36,312	0/0:32,1:33:53.86:0,54,692	0/0:7,0:7:14.99:0,15,130
chr10	6193298	.	G	GACAC	4202.94	PASS	AB=0.919;AC=32;AF=0.593;AN=54;BaseQRankSum=-7.354;DP=651;FS=1.995;HRun=0;HaplotypeScore=130.2559;InbreedingCoeff=0.6205;MQ=70.87;MQ0=21;MQRankSum=0.690;QD=9.24;ReadPosRankSum=-2.897;VQSLOD=2.4517;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:24:11.61:118,12,0	0/0:4,0:7:0.84:0,1,24	./.	0/1:68,0:34:0:0,0,0	0/0:19,0:19:15.36:0,15,132	1/1:19,11:32:14.52:237,15,0	1/1:13,7:21:20.70:346,21,0	1/1:26,0:25:9.29:57,9,0	1/1:6,5:13:6.02:142,6,0	0/1:13,0:24:8.26:8,0,161	0/0:9,0:14:13.10:0,13,99	0/0:13,0:23:29.77:0,30,271	0/0:4,0:17:30.03:0,30,279	0/0:12,0:21:26.94:0,27,274	1/1:20,3:27:10.38:552,10,0	1/1:11,13:26:17.80:367,18,0	1/1:21,2:22:19.93:532,20,0	0/0:7,0:8:9.02:0,9,101	1/1:23,0:23:8.37:76,8,0	1/1:14,9:24:17.80:329,18,0	0/0:7,0:12:12.01:0,12,112	1/1:18,7:27:11.51:149,12,0	0/0:10,0:18:23.84:0,24,195	0/1:11,0:18:33.87:34,0,97	1/1:9,9:20:20.43:419,20,0	1/1:10,0:22:41.53:477,42,0	0/1:15,0:29:21.11:307,0,21	1/1:3,0:8:3.01:52,3,0
chr10	6195524	.	AACACACACACACACGCACGCGCGCGCGCACACACAC	A	1703.35	PASS	AB=0.964;AC=9;AF=0.161;AN=56;BaseQRankSum=4.466;DP=402;FS=26.083;HRun=0;HaplotypeScore=325.9834;InbreedingCoeff=0.7972;MQ=64.90;MQ0=4;MQRankSum=-5.011;QD=25.05;ReadPosRankSum=-0.066;VQSLOD=1.1784;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:37.22:0,37,2272	0/0:6,0:6:11.97:0,12,689	0/1:26,0:20:4.64:5,0,354	0/0:23,0:20:18.04:0,18,284	0/0:12,0:12:18.06:0,18,1563	0/0:13,0:13:30.07:0,30,1981	0/0:17,0:17:30.02:0,30,1169	1/1:15,0:15:14.94:300,15,0	0/0:16,0:16:27.08:0,27,2515	0/0:13,0:13:21.06:0,21,626	0/0:10,0:10:24.05:0,24,1755	0/0:10,0:10:24:0,24,1316	0/0:8,0:8:15.04:0,15,759	0/0:20,0:20:33.11:0,33,3043	0/0:10,0:10:24.08:0,24,2028	0/0:12,0:12:23.98:0,24,1872	0/0:21,0:21:48.15:0,48,3253	0/0:16,0:15:39.13:0,39,2762	0/0:19,0:19:21.07:0,21,1350	0/0:10,0:10:21.06:0,21,1639	0/0:19,0:20:45.15:0,45,3333	0/0:5,0:5:9.01:0,9,200	0/0:19,0:19:41.44:0,41,2532	0/0:17,0:17:36.08:0,36,2813	0/0:17,0:16:30.09:0,30,2096	1/1:9,0:9:21.03:629,21,0	1/1:4,9:13:6.02:549,6,0	1/1:3,0:4:5.72:367,6,0
chr10	6195537	.	ACGCACGCGCGCGCG	A	1193.95	PASS	AB=1.000;AC=8;AF=0.143;AN=56;BaseQRankSum=5.484;DP=353;FS=36.519;HRun=0;HaplotypeScore=129.0165;InbreedingCoeff=0.6083;MQ=62.76;MQ0=13;MQRankSum=-5.770;QD=27.14;ReadPosRankSum=-0.360;VQSLOD=1.3999;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:7.80:0,8,1367	0/0:5,0:5:11.97:0,12,417	0/1:19,0:13:6.76:7,0,353	0/0:14,0:12:18.04:0,18,278	0/0:8,0:7:18.06:0,18,850	0/0:19,0:19:33.08:0,33,1449	0/0:13,0:13:28.72:0,29,1254	1/1:1,5:5:14.94:300,15,0	0/0:12,0:12:30.09:0,30,1250	0/0:12,0:10:27.09:0,27,639	0/0:9,0:9:24.05:0,24,946	0/0:12,0:11:33.03:0,33,1128	0/0:6,0:6:14.61:0,15,377	0/0:18,0:18:39.13:0,39,1794	0/0:9,0:9:24.08:0,24,939	0/0:9,0:9:26.99:0,27,1033	0/0:21,0:20:54.18:0,54,1912	0/0:21,0:20:45.71:0,46,2068	0/0:9,0:8:24.08:0,24,1004	0/0:8,0:7:21.06:0,21,870	0/0:27,0:25:51.17:0,51,2152	0/0:8,0:8:11.46:0,11,338	0/0:21,0:21:44.17:0,44,1718	0/0:15,0:15:36.08:0,36,1390	0/0:17,0:16:36.11:0,36,1516	0/1:8,0:8:80.31:605,0,80	1/1:9,0:9:6.02:204,6,0	1/1:2,0:2:6.02:214,6,0
chr10	6195541	.	ACGCGCGCGCG	A	865.61	PASS	AB=0.808;AC=8;AF=0.143;AN=56;BaseQRankSum=4.841;DP=344;FS=24.056;HRun=0;HaplotypeScore=100.4799;InbreedingCoeff=0.5380;MQ=60.67;MQ0=15;MQRankSum=-5.613;QD=22.20;ReadPosRankSum=-1.028;VQSLOD=0.8074;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:26.90:0,27,1075	0/0:5,0:5:9.03:0,9,312	0/1:13,0:8:30.44:30,0,134	0/0:9,0:7:7.27:0,7,147	0/0:8,0:7:18.06:0,18,685	0/0:18,0:18:30.10:0,30,1194	0/0:12,0:12:11.68:0,12,1006	1/1:7,0:5:6.02:196,6,0	0/0:12,0:12:27.09:0,27,950	0/0:10,0:8:24.07:0,24,469	0/0:8,0:8:18.06:0,18,693	0/0:12,0:11:30.10:0,30,917	0/0:7,0:7:14.76:0,15,291	0/0:17,0:17:39.13:0,39,1364	0/0:8,0:8:24.04:0,24,706	0/0:8,0:8:21.06:0,21,718	0/0:22,0:21:55.87:0,56,1437	0/0:20,1:20:29.96:0,30,1721	0/0:13,0:12:31.60:0,32,977	0/0:11,0:10:18.06:0,18,666	0/0:27,0:24:51.16:0,51,1743	0/0:8,0:8:8.62:0,9,231	0/0:19,0:19:35.62:0,36,1279	0/0:17,0:17:35.99:0,36,1101	0/0:16,0:15:33.11:0,33,1152	0/1:3,5:8:27.91:468,0,28	1/1:9,0:9:6.02:140,6,0	1/1:1,1:2:6.02:164,6,0
chr10	6195551	.	GCA	G	1453.04	PASS	AB=0.881;AC=42;AF=0.875;AN=48;BaseQRankSum=0.892;DP=333;FS=0.000;HRun=0;HaplotypeScore=52.3921;InbreedingCoeff=-0.2178;MQ=54.37;MQ0=18;MQRankSum=1.538;QD=4.58;ReadPosRankSum=-1.119;VQSLOD=2.0354;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:18,0:18:32.49:57,0,32	./.	./.	./.	0/1:11,0:10:13.09:46,0,13	0/1:8,9:19:32.50:67,0,32	0/1:16,0:15:35.70:39,0,36	./.	1/1:7,4:12:6.02:65,6,0	1/1:8,1:7:2.84:14,3,0	1/1:6,4:10:6.49:65,6,0	1/1:8,2:10:8.86:79,9,0	1/1:4,3:8:5.68:28,6,0	1/1:14,1:17:11.51:66,12,0	0/1:10,0:10:14.25:46,0,14	1/1:4,2:6:8.24:71,8,0	1/1:11,5:18:14.54:106,15,0	1/1:17,3:20:23.25:212,23,0	1/1:14,0:12:6.01:58,6,0	1/1:6,5:9:3.01:32,3,0	1/1:28,2:27:20.94:183,21,0	1/1:9,0:10:11.79:86,12,0	1/1:14,1:16:3:32,3,0	1/1:16,0:16:11.66:80,12,0	0/1:7,8:14:32.31:85,0,32	1/1:6,0:6:2.88:15,3,0	1/1:9,0:9:5.68:28,6,0	1/1:2,0:2:2.84:14,3,0
chr10	6195821	.	T	TA	10471.69	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=-12.119;DP=493;FS=14.095;HRun=8;HaplotypeScore=45.9858;InbreedingCoeff=0.9949;MQ=69.58;MQ0=0;MQRankSum=1.789;QD=29.33;ReadPosRankSum=2.859;VQSLOD=3.8444;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:48.02:0,48,439	1/1:0,5:5:15.04:173,15,0	0/0:12,0:11:21:0,21,189	0/0:9,0:8:21.01:0,21,191	1/1:4,17:21:57.15:644,57,0	1/1:0,20:20:54.16:623,54,0	1/1:1,14:15:42.12:485,42,0	0/0:36,0:36:84.02:0,84,764	1/1:2,11:13:36.10:406,36,0	1/1:1,21:22:63.12:710,63,0	1/1:2,18:20:48.14:549,48,0	1/1:1,14:15:36.11:415,36,0	1/1:4,19:23:51.15:589,51,0	1/1:1,12:13:30.09:346,30,0	1/1:2,14:17:39.12:450,39,0	1/1:0,19:19:48.11:554,48,0	1/1:0,12:12:33.10:381,33,0	1/1:4,15:19:45.13:519,45,0	1/1:3,20:23:60.15:669,60,0	1/1:1,24:25:72.18:817,72,0	1/1:1,10:11:33.10:381,33,0	1/1:2,19:21:45.13:519,45,0	1/1:1,17:18:51.15:589,51,0	1/1:3,9:12:27.08:312,27,0	1/1:2,11:13:25.67:340,26,0	0/0:22,0:22:63.03:0,63,574	0/0:13,0:13:38.99:0,39,349	0/0:25,0:25:75:0,75,678
chr10	6196553	.	T	TTC	36.29	PASS	AB=0.873;AC=3;AF=0.054;AN=56;BaseQRankSum=3.739;DP=479;FS=7.609;HRun=0;HaplotypeScore=60.5930;InbreedingCoeff=-0.0562;MQ=63.65;MQ0=4;MQRankSum=-3.465;QD=1.04;ReadPosRankSum=-2.687;VQSLOD=-0.0361;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:75.23:0,75,1190	0/0:7,0:7:21.07:0,21,340	0/0:17,0:14:39.13:0,39,599	0/0:17,0:11:33.08:0,33,510	0/0:21,0:21:60.14:0,60,951	0/0:22,0:22:66.21:0,66,1050	0/0:11,0:10:27.09:0,27,440	0/0:26,0:26:75.20:0,75,1142	0/1:11,1:12:21.64:22,0,500	0/0:20,0:20:60.20:0,60,975	0/0:17,0:16:48.16:0,48,783	0/1:16,1:17:13.10:13,0,634	0/0:15,0:15:42.14:0,42,682	0/0:24,0:23:63.22:0,63,1028	0/0:13,0:13:39.13:0,39,636	0/0:7,0:7:21.07:0,21,343	0/0:30,1:31:35.51:0,36,1367	0/0:10,0:8:20.99:0,21,336	0/0:21,0:21:60.20:0,60,955	0/0:17,0:17:48.16:0,48,777	0/0:15,0:15:45.15:0,45,731	0/0:22,0:22:60.19:0,60,947	0/0:8,0:8:21.07:0,21,343	0/0:20,0:20:54.17:0,54,838	0/0:22,0:22:63.21:0,63,1016	0/0:20,0:20:57.19:0,57,908	0/0:13,0:13:39.12:0,39,611	0/1:4,2:6:98.98:99,0,132
chr10	6200153	.	TACACACACAC	T	1741.12	PASS	AB=0.830;AC=26;AF=0.500;AN=52;BaseQRankSum=3.944;DP=486;FS=24.623;HRun=0;HaplotypeScore=145.7995;InbreedingCoeff=-0.2761;MQ=66.05;MQ0=10;MQRankSum=-2.960;QD=5.05;ReadPosRankSum=-3.046;VQSLOD=0.4873;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:19:14.69:0,15,243	1/1:8,1:10:15.02:247,15,0	./.	./.	0/0:15,9:23:4.11:0,4,18	0/1:11,0:14:3.49:3,0,10	0/1:14,0:14:27.19:27,0,45	0/0:20,0:20:11.80:0,12,74	0/1:20,0:21:31.65:39,0,32	0/1:15,0:14:5.01:127,0,5	0/1:11,3:14:17.65:61,0,18	0/1:9,4:13:16.87:82,0,17	0/1:8,9:17:48.68:420,0,49	0/1:6,7:13:1.08:60,0,1	0/1:11,2:13:7.75:187,0,8	0/1:7,0:19:3.86:79,0,4	1/1:15,0:22:1.68:27,2,0	0/1:7,0:6:38.61:39,0,40	0/0:10,0:10:5.91:0,6,39	0/1:15,0:20:11.97:52,0,12	0/1:26,0:27:35.36:42,0,35	0/1:13,0:21:40.33:41,0,40	1/1:9,11:20:2.87:73,3,0	1/1:11,6:17:3.01:70,3,0	0/0:13,0:17:2.94:0,3,22	0/1:13,0:15:23.55:24,0,62	1/1:15,0:17:8.42:115,8,0	0/1:9,0:11:69.53:72,0,70
chr10	6202392	.	TACAC	T	1391.83	PASS	AB=0.833;AC=31;AF=0.646;AN=48;BaseQRankSum=4.018;DP=492;FS=5.099;HRun=0;HaplotypeScore=95.2943;InbreedingCoeff=0.3706;MQ=56.30;MQ0=13;MQRankSum=1.357;QD=4.80;ReadPosRankSum=1.833;VQSLOD=1.4241;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:25:5.24:0,5,34	1/1:4,0:7:5.99:50,6,0	./.	./.	1/1:7,0:10:3:28,3,0	0/1:13,9:22:34.26:84,0,34	1/1:21,5:28:21.48:262,21,0	0/0:11,0:11:0.47:0,0,1	1/1:13,4:17:9.03:139,9,0	0/1:25,0:25:20.79:21,0,62	1/1:11,0:16:3.89:29,4,0	1/1:11,0:13:9.01:84,9,0	0/0:11,0:14:0.06:0,0,1	1/1:16,0:18:6.01:56,6,0	1/1:19,0:18:4.25:45,4,0	1/1:8,4:12:6.02:93,6,0	1/1:13,5:18:14.96:232,15,0	0/1:19,0:24:48.60:49,0,59	./.	1/1:12,4:16:12.04:186,12,0	./.	1/1:18,2:19:9.02:121,9,0	1/1:5,0:9:3:28,3,0	0/0:21,0:23:2.51:0,3,42	1/1:12,0:12:3.01:35,3,0	0/0:17,0:16:15.04:0,15,234	0/0:13,0:14:15.73:0,16,213	0/0:11,0:11:21.04:0,21,410
chr10	6202566	.	A	AACAC	2279.68	PASS	AB=0.909;AC=36;AF=0.783;AN=46;BaseQRankSum=-0.017;DP=515;FS=0.000;HRun=0;HaplotypeScore=125.2832;InbreedingCoeff=0.4811;MQ=46.54;MQ0=34;MQRankSum=-0.533;QD=5.73;ReadPosRankSum=-0.723;VQSLOD=2.3782;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:14.70:0,15,168	./.	./.	./.	0/1:15,0:15:0:0,0,0	1/1:7,1:17:2.74:12,3,0	1/1:26,9:36:14.79:294,15,0	0/0:16,0:8:3:0,3,25	1/1:15,6:25:8.77:153,9,0	1/1:21,0:19:15.04:222,15,0	0/1:7,2:9:0.04:0,0,0	1/1:18,0:18:3.01:43,3,0	1/1:18,0:16:9.01:99,9,0	1/1:21,0:19:12.04:184,12,0	1/1:14,5:18:8.88:160,9,0	./.	1/1:17,7:26:20.75:384,21,0	1/1:31,0:30:5.70:275,6,0	1/1:10,0:7:0.47:1,0,0	1/1:19,0:17:4.13:117,4,0	1/1:37,0:31:10.83:124,11,0	1/1:11,0:10:2.99:32,3,0	1/1:18,0:19:3.01:52,3,0	1/1:22,0:23:5.95:70,6,0	1/1:20,0:19:12.03:178,12,0	0/0:17,0:17:2.19:0,2,7	0/0:9,0:9:3.27:0,3,14	./.
chr10	6203851	.	CA	C	14596.94	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=10.932;DP=520;FS=8.587;HRun=1;HaplotypeScore=55.1611;InbreedingCoeff=0.9626;MQ=75.85;MQ0=0;MQRankSum=-1.631;QD=37.62;ReadPosRankSum=3.655;VQSLOD=4.9864;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,118,1853	1/1:0,10:10:24.08:334,24,0	0/0:17,0:16:13.10:0,13,397	0/0:11,0:11:18.31:0,18,354	1/1:0,14:14:42.07:560,42,0	1/1:2,21:23:69.21:924,69,0	1/1:0,17:17:45.15:626,45,0	0/0:26,0:26:75.23:0,75,1133	1/1:0,19:19:39.13:543,39,0	1/1:0,29:29:87.26:1167,87,0	1/1:0,28:28:84.24:1147,84,0	1/1:0,19:19:45.15:627,45,0	1/1:0,12:12:33.11:459,33,0	1/1:0,26:26:66.22:919,66,0	1/1:0,20:20:54.15:752,54,0	1/1:0,22:22:60.20:835,60,0	1/1:0,16:16:45.15:626,45,0	1/1:0,15:15:36.12:501,36,0	1/1:0,18:18:54.16:721,54,0	1/1:0,19:19:57.19:791,57,0	1/1:0,13:13:33.11:459,33,0	1/1:0,16:16:48.09:643,48,0	1/1:0,13:13:36.12:501,36,0	1/1:0,17:17:45.15:627,45,0	1/1:0,22:22:60.20:835,60,0	0/0:14,1:15:3.34:0,3,611	0/0:12,0:12:36.11:0,36,545	0/0:9,0:9:27.07:0,27,404
chr10	6205882	.	ATCTCTCTCTCTCTCTC	A	1267.49	PASS	AB=0.925;AC=22;AF=0.423;AN=52;BaseQRankSum=4.017;DP=494;FS=0.974;HRun=0;HaplotypeScore=189.7871;InbreedingCoeff=0.1580;MQ=68.40;MQ0=13;MQRankSum=-0.205;QD=4.59;ReadPosRankSum=0.681;VQSLOD=2.6235;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:25:2.25:2,0,209	0/1:5,0:5:29.65:58,0,30	./.	0/1:22,0:10:0:0,0,0	0/1:16,7:24:35.07:35,0,49	0/1:22,1:23:19.83:20,0,222	0/0:20,0:19:6.44:0,6,53	0/0:38,0:38:12:0,12,179	0/1:19,1:20:70.45:70,0,125	1/1:11,8:19:9.80:410,10,0	./.	0/1:14,0:17:20.48:92,0,20	1/1:11,1:15:5.99:133,6,0	1/1:9,1:11:12.02:169,12,0	0/0:13,0:15:15:0,15,191	1/1:12,0:14:5.85:44,6,0	0/0:16,0:16:8.55:0,9,53	1/1:13,4:17:6.36:198,6,0	0/1:18,0:18:0.01:0,0,0	0/0:13,0:12:3.01:0,3,35	0/0:23,0:22:5.51:0,6,34	0/0:8,0:8:9.03:0,9,135	0/1:10,3:12:39.27:39,0,40	1/1:20,0:17:8.97:110,9,0	0/1:10,0:10:31.52:42,0,32	0/0:16,0:16:7.27:0,7,224	0/0:16,0:15:6.02:0,6,254	0/0:18,0:18:7.27:0,7,125
chr10	6205946	.	T	TTC	2012.10	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-6.796;DP=667;FS=9.170;HRun=0;HaplotypeScore=97.1184;InbreedingCoeff=0.9831;MQ=54.22;MQ0=33;MQRankSum=1.785;QD=24.54;ReadPosRankSum=-1.749;VQSLOD=3.9411;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:72.11:0,72,865	0/0:9,0:9:21.07:0,21,265	0/0:54,0:20:40.88:0,41,418	0/0:54,0:13:14.95:0,15,244	0/0:29,0:28:53.61:0,54,654	0/0:28,0:27:51.12:0,51,597	0/0:27,0:25:65.96:0,66,778	1/1:6,21:27:60.09:790,60,0	0/0:25,0:24:42.12:0,42,518	0/0:19,0:19:41.88:0,42,487	0/0:23,0:23:57.04:0,57,701	0/0:19,0:18:32.81:0,33,405	0/0:19,0:19:41.92:0,42,493	0/0:18,0:18:41.74:0,42,473	0/0:34,0:32:81.03:0,81,946	0/0:16,0:15:42.05:0,42,506	0/0:19,0:19:44.96:0,45,523	0/0:17,0:17:32.24:0,32,341	0/0:19,0:14:41.24:0,41,425	0/0:24,0:23:60.07:0,60,677	0/0:28,0:27:44.51:0,45,517	0/0:15,0:14:14.16:0,14,413	0/0:16,0:15:33.08:0,33,387	0/0:22,0:21:45.10:0,45,549	0/0:24,0:23:63.12:0,63,707	1/1:5,17:22:17.15:694,17,0	1/1:2,14:15:24.08:387,24,0	1/1:7,7:13:18.06:299,18,0
chr10	6206158	.	A	AT	12317.63	PASS	AB=0.971;AC=52;AF=0.929;AN=56;BaseQRankSum=-7.252;DP=524;FS=24.157;HRun=9;HaplotypeScore=47.8979;InbreedingCoeff=0.6598;MQ=79.80;MQ0=0;MQRankSum=-3.860;QD=24.34;ReadPosRankSum=1.717;VQSLOD=3.3935;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:44.97:0,45,391	1/1:1,4:5:9.02:100,9,0	0/1:16,0:16:0.01:0,0,154	0/1:15,1:16:7.28:7,0,178	1/1:3,28:31:55:783,55,0	1/1:2,14:16:36.10:398,36,0	1/1:3,19:22:54.15:597,54,0	1/1:10,22:32:66.18:730,66,0	1/1:1,22:23:66.18:730,66,0	1/1:5,23:28:39.86:649,40,0	1/1:1,19:20:48.05:504,48,0	1/1:0,17:17:48.13:531,48,0	1/1:3,17:21:50.97:545,51,0	1/1:0,14:14:30.08:332,30,0	1/1:0,21:21:57.15:631,57,0	1/1:2,8:9:21.06:231,21,0	1/1:3,14:17:36.10:398,36,0	1/1:3,16:19:42.11:465,42,0	1/1:3,11:14:33.09:365,33,0	1/1:3,22:25:69.11:737,69,0	1/1:2,13:15:36.10:398,36,0	1/1:1,17:18:36.10:398,36,0	1/1:2,16:18:48.13:531,48,0	1/1:1,19:20:48.13:531,48,0	1/1:1,15:16:39.11:431,39,0	1/1:3,13:16:33.05:344,33,0	1/1:3,24:27:51.99:784,52,0	1/1:0,8:8:15.04:166,15,0
chr10	6208109	.	GCC	G	20456.22	PASS	AB=0.913;AC=43;AF=0.768;AN=56;BaseQRankSum=11.462;DP=632;FS=5.087;HRun=2;HaplotypeScore=81.3573;InbreedingCoeff=0.8994;MQ=83.53;MQ0=1;MQRankSum=-3.578;QD=42.18;ReadPosRankSum=4.791;VQSLOD=4.9300;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,132,2630	1/1:0,9:9:24.08:391,24,0	0/0:26,0:26:75.25:0,75,1519	0/0:12,0:12:36.07:0,36,626	1/1:0,25:25:75.26:1223,75,0	1/1:0,22:22:57.19:930,57,0	1/1:0,14:14:36.12:587,36,0	0/0:27,0:27:81.26:0,81,1578	1/1:0,26:26:66.23:1076,66,0	1/1:0,34:34:99:1641,102,0	1/1:0,18:18:54.18:881,54,0	1/1:0,22:22:57.19:930,57,0	1/1:0,23:23:63.17:1027,63,0	1/1:0,30:30:81.28:1320,81,0	1/1:0,35:35:87.30:1419,87,0	1/1:0,20:20:54.18:881,54,0	1/1:0,16:16:36.12:587,36,0	1/1:0,12:12:36.12:587,36,0	1/1:0,15:15:45.15:734,45,0	1/1:0,25:24:69.23:1109,69,0	1/1:0,16:16:48.16:783,48,0	1/1:0,35:35:96.33:1565,96,0	1/1:0,31:31:84.20:1335,84,0	1/1:0,19:19:45.15:731,45,0	1/1:0,17:17:42.14:685,42,0	0/1:19,2:21:34.68:35,0,1065	0/0:24,0:22:72.21:0,72,1379	0/0:12,0:12:36.08:0,36,690
chr10	6209697	.	T	TG	1519.22	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-5.838;DP=691;FS=16.308;HRun=3;HaplotypeScore=148.2861;InbreedingCoeff=0.8957;MQ=83.71;MQ0=0;MQRankSum=-4.443;QD=31.00;ReadPosRankSum=0.128;VQSLOD=1.5588;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,46:49:99:1614,123,0	0/0:4,0:4:9.03:0,9,108	0/0:26,0:26:60.15:0,60,695	0/0:24,0:24:45.15:0,45,657	0/0:38,0:38:99:0,111,1320	0/0:18,0:18:54.17:0,54,648	0/0:20,0:20:54.15:0,54,635	0/0:26,0:26:78.24:0,78,936	0/0:33,0:33:99:0,99,1187	0/0:27,0:27:78.23:0,78,928	0/0:17,0:17:51.16:0,51,612	0/0:15,0:15:39.12:0,39,468	0/0:30,0:30:87.27:0,87,1043	0/0:23,0:23:69.21:0,69,828	0/0:33,0:33:99:0,99,1165	0/0:26,0:26:72.22:0,72,864	0/0:26,0:26:78.22:0,78,922	0/0:22,0:22:54.16:0,54,646	0/0:24,0:24:69.21:0,69,827	0/0:33,0:33:87.25:0,87,1031	0/0:25,0:25:75.23:0,75,900	0/0:27,0:27:69.21:0,69,828	0/0:29,0:29:84.26:0,84,1007	0/0:32,0:32:93.29:0,93,1116	0/0:21,0:21:57.16:0,57,674	0/0:24,0:24:66.19:0,66,780	0/0:16,0:16:42.13:0,42,504	0/0:3,0:3:9.03:0,9,107
chr10	6209923	.	C	CACAAA	3148.21	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=-9.903;DP=708;FS=0.000;HRun=0;HaplotypeScore=193.3852;InbreedingCoeff=0.8997;MQ=76.94;MQ0=5;MQRankSum=0.460;QD=26.91;ReadPosRankSum=-1.696;VQSLOD=2.7971;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:45.11:0,45,501	0/0:11,0:11:26.98:0,27,398	0/1:34,0:27:3.62:4,0,185	0/0:38,0:27:26.06:0,26,266	0/0:28,0:28:66.21:0,66,1059	0/0:22,0:22:45.61:0,46,746	0/0:28,0:28:45.13:0,45,667	1/1:27,0:27:30.56:541,31,0	0/0:23,0:23:48.16:0,48,790	0/0:22,0:22:41.96:0,42,618	0/0:22,0:22:54.17:0,54,800	0/0:18,0:18:42.14:0,42,656	0/0:34,0:34:66.20:0,66,1047	0/0:22,0:22:45.15:0,45,743	0/0:31,0:31:51.14:0,51,792	0/0:31,0:31:54.16:0,54,852	0/0:37,0:37:63.19:0,63,1000	0/0:22,0:22:45.13:0,45,710	0/0:17,0:17:29.11:0,29,356	0/0:33,0:33:75.22:0,75,1174	0/0:23,0:23:42.14:0,42,666	0/0:30,0:30:69.23:0,69,1128	0/0:29,0:29:44.59:0,45,767	0/0:28,0:28:60.15:0,60,923	0/0:18,0:18:30.10:0,30,475	1/1:4,13:19:42.13:985,42,0	1/1:16,8:24:51.17:1350,51,0	1/1:5,8:13:15.05:429,15,0
chr10	6209940	.	CA	C	601.71	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.872;DP=714;FS=0.810;HRun=4;HaplotypeScore=150.1283;InbreedingCoeff=0.9911;MQ=65.12;MQ0=7;MQRankSum=-2.980;QD=25.07;ReadPosRankSum=-0.664;VQSLOD=1.9213;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,17:24:60.17:697,60,0	0/0:12,0:12:33.08:0,33,442	0/0:31,0:22:32.34:0,32,599	0/0:34,0:23:54:0,54,624	0/0:25,0:25:75.20:0,75,1010	0/0:19,0:19:57.12:0,57,727	0/0:27,0:27:69.12:0,69,884	0/0:23,0:22:60.13:0,60,755	0/0:23,0:23:64.77:0,65,882	0/0:24,0:23:63.13:0,63,814	0/0:27,0:27:78.15:0,78,1007	0/0:24,0:24:68.61:0,69,846	0/0:32,0:32:90.13:0,90,1137	0/0:25,0:25:63.16:0,63,841	0/0:30,0:30:75.09:0,75,933	0/0:31,0:31:78.20:0,78,1047	0/0:37,0:37:87.20:0,87,1136	0/0:20,1:21:57.11:0,57,735	0/0:15,0:15:42.06:0,42,522	0/0:40,0:40:99:0,112,1394	0/0:18,0:18:51.17:0,51,709	0/0:28,0:28:81.19:0,81,1074	0/0:33,0:33:78.21:0,78,1050	0/0:32,0:32:81.13:0,81,1033	0/0:19,0:19:42.09:0,42,547	0/0:19,0:19:53.87:0,54,546	0/0:29,0:29:86.82:0,87,871	0/0:12,0:12:17.89:0,18,148
chr10	6209945	.	C	CA	653.38	PASS	AB=0.897;AC=4;AF=0.071;AN=56;BaseQRankSum=3.596;DP=712;FS=1.198;HRun=4;HaplotypeScore=148.8025;InbreedingCoeff=-0.0771;MQ=64.72;MQ0=8;MQRankSum=-0.820;QD=7.87;ReadPosRankSum=1.288;VQSLOD=0.3495;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:51.04:0,51,479	0/0:12,0:12:33.02:0,33,396	0/0:29,0:21:22.28:0,22,392	0/0:30,0:21:38.72:0,39,496	0/0:27,0:27:81.14:0,81,942	0/0:21,0:21:57.58:0,58,670	0/0:27,0:27:66.20:0,66,792	0/1:14,8:21:99:258,0,362	0/0:24,0:23:60.18:0,60,714	0/0:23,0:23:27.93:0,28,698	0/0:26,0:26:75.21:0,75,880	0/0:24,1:25:46.72:0,47,759	0/0:31,0:31:81.14:0,81,966	0/0:24,0:24:63.19:0,63,756	0/0:31,0:31:75.17:0,75,898	0/0:30,0:30:75.22:0,75,889	0/0:32,0:32:87.17:0,87,1009	0/0:23,0:23:63.19:0,63,751	0/0:16,0:16:45.06:0,45,511	0/0:40,0:40:99:0,120,1414	0/0:19,0:19:51.10:0,51,611	0/0:29,0:29:84.26:0,84,1006	0/0:32,0:32:81.23:0,81,952	0/0:31,0:31:81.22:0,81,958	0/0:20,0:20:48.15:0,48,574	0/1:18,0:18:99:211,0,127	0/1:24,5:29:99:258,0,337	0/1:14,0:14:35.40:35,0,52
chr10	6209953	.	C	CA	14695.20	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=-8.438;DP=711;FS=3.089;HRun=8;HaplotypeScore=104.8972;InbreedingCoeff=0.9576;MQ=65.59;MQ0=7;MQRankSum=1.253;QD=26.77;ReadPosRankSum=3.303;VQSLOD=4.5830;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:26:3.85:0,4,31	1/1:2,10:12:27.08:312,27,0	0/0:26,0:20:7.98:0,8,137	0/0:26,0:19:34.63:0,35,262	1/1:6,26:32:78.19:881,78,0	1/1:5,19:24:66.15:739,66,0	1/1:1,24:25:54.16:623,54,0	0/0:21,0:20:37.63:0,38,355	1/1:8,15:23:59.99:662,60,0	1/1:7,19:26:63.18:718,63,0	1/1:4,23:27:63.14:709,63,0	1/1:7,16:23:60.13:669,60,0	1/1:4,24:28:69.21:796,69,0	1/1:6,19:25:57.15:643,57,0	1/1:5,28:33:69.21:797,69,0	1/1:3,27:30:69.68:797,70,0	1/1:4,27:31:78.23:900,78,0	1/1:3,19:22:54.16:623,54,0	1/1:3,10:14:26.91:292,27,0	1/1:7,36:44:89.26:1214,89,0	1/1:3,16:20:47.96:524,48,0	1/1:10,20:30:49:805,49,0	1/1:4,23:28:59.65:668,60,0	1/1:4,24:29:66.03:742,66,0	1/1:3,18:21:51.14:581,51,0	0/0:15,0:15:44.62:0,45,338	0/0:29,0:30:69.67:0,70,574	0/0:15,0:15:26.79:0,27,206
chr10	6209954	.	A	AAAC	398.13	PASS	AB=0.939;AC=5;AF=0.089;AN=56;BaseQRankSum=7.988;DP=703;FS=0.000;HRun=0;HaplotypeScore=177.1552;InbreedingCoeff=-0.0840;MQ=65.70;MQ0=7;MQRankSum=-4.177;QD=3.79;ReadPosRankSum=-0.160;VQSLOD=2.6153;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:14,11:25:14.75:238,0,15	0/0:12,0:12:30.01:0,30,146	0/0:27,0:19:23.69:0,24,396	0/0:27,0:19:29.03:0,29,441	0/0:32,0:32:77.06:0,77,361	0/0:23,0:23:60.01:0,60,269	0/0:25,0:25:48.13:0,48,201	0/1:20,0:19:95.78:96,0,559	0/0:24,0:23:50.50:0,50,245	0/0:27,0:26:64.91:0,65,315	0/0:27,0:27:53.57:0,54,224	0/0:23,0:23:53.88:0,54,247	0/0:29,0:29:70.35:0,70,330	0/0:25,0:25:55.72:0,56,257	0/0:33,0:33:70.27:0,70,329	0/0:30,0:30:64.26:0,64,281	0/0:31,0:31:77.96:0,78,350	0/0:21,0:21:50.85:0,51,219	0/0:13,0:13:20.26:0,20,103	0/0:44,0:44:99:0,100,500	0/0:19,0:19:37.06:0,37,174	0/0:30,0:30:72.82:0,73,369	0/0:27,0:27:53.03:0,53,253	0/0:28,0:28:58.50:0,59,284	0/0:21,0:21:43:0,43,175	0/1:15,0:15:30.48:30,0,251	0/1:30,0:30:99:137,0,601	0/1:15,0:15:13.94:14,0,136
chr10	6210036	.	C	CT	15809.36	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-5.175;DP=567;FS=2.398;HRun=8;HaplotypeScore=58.3010;InbreedingCoeff=0.9352;MQ=73.34;MQ0=0;MQRankSum=-3.795;QD=28.85;ReadPosRankSum=1.378;VQSLOD=5.1498;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,13:19:39.12:450,39,0	1/1:0,7:7:21.06:242,21,0	0/0:12,0:12:8.41:0,8,145	0/0:7,0:7:10.82:0,11,86	1/1:10,19:29:78.22:890,78,0	1/1:5,22:27:69.19:786,69,0	1/1:3,18:21:51.15:589,51,0	1/1:6,14:20:42.12:485,42,0	1/1:3,15:18:51.14:578,51,0	1/1:7,23:30:78.23:900,78,0	1/1:11,14:25:63.18:719,63,0	1/1:3,21:24:63.17:718,63,0	1/1:6,13:19:17.64:444,18,0	1/1:4,11:15:42.12:482,42,0	1/1:7,26:33:90.23:1011,90,0	1/1:2,12:14:39.10:440,39,0	1/1:5,23:28:75.22:865,75,0	1/1:3,12:16:38.95:430,39,0	1/1:3,22:25:63.17:716,63,0	1/1:11,18:29:38.71:680,39,0	1/1:2,9:11:27.08:312,27,0	1/1:3,29:32:73.78:956,74,0	1/1:4,19:23:60.18:692,60,0	1/1:2,12:14:36.11:415,36,0	1/1:1,12:13:36.11:415,36,0	1/1:1,11:12:33.10:381,33,0	1/1:4,23:26:66.20:762,66,0	1/1:1,16:17:39.12:450,39,0
chr10	6213830	.	ATGGTGGGGCTGCCCAGGGTTATACAGTTCACACG	A	3188.33	PASS	AC=46;AF=0.885;AN=52;BaseQRankSum=-0.352;DP=409;FS=8.115;HRun=0;HaplotypeScore=328.4787;InbreedingCoeff=0.5187;MQ=66.21;MQ0=2;MQRankSum=3.105;QD=9.21;ReadPosRankSum=3.809;VQSLOD=1.0924;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:25:20.88:165,21,0	1/1:10,0:10:11.99:100,12,0	0/0:12,0:7:5.84:0,6,50	0/0:17,0:10:8.77:0,9,72	1/1:14,14:28:17.41:101,17,0	1/1:19,0:19:23.91:280,24,0	./.	0/0:18,0:15:0:0,0,0	1/1:9,0:9:5.99:48,6,0	1/1:6,0:6:3:54,3,0	1/1:7,10:16:11.25:56,11,0	1/1:8,0:8:5.99:50,6,0	1/1:15,0:15:9:119,9,0	1/1:7,0:7:8.95:115,9,0	1/1:16,0:16:23.98:379,24,0	./.	1/1:19,0:19:14.94:165,15,0	1/1:15,0:14:17.94:164,18,0	1/1:23,0:23:7.54:60,8,0	1/1:9,0:9:11.95:97,12,0	1/1:18,0:18:20.96:347,21,0	1/1:15,7:22:4.59:27,5,0	1/1:11,0:11:5.99:50,6,0	1/1:18,0:18:29.93:374,30,0	1/1:15,0:15:15.75:120,16,0	1/1:8,7:15:20.78:167,21,0	1/1:17,0:17:18.01:246,18,0	1/1:4,0:4:2.91:19,3,0
chr10	6219915	.	T	TTAATAA	7198.97	PASS	AC=46;AF=0.958;AN=48;BaseQRankSum=-1.533;DP=242;FS=3.713;HRun=0;HaplotypeScore=55.2086;InbreedingCoeff=0.1798;MQ=46.82;MQ0=0;MQRankSum=-1.453;QD=33.02;ReadPosRankSum=0.737;VQSLOD=4.3533;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,1:8:3.01:34,3,0	1/1:0,1:1:3.01:99,3,0	./.	0/0:10,0:9:2.94:0,3,63	1/1:5,4:10:14.98:412,15,0	1/1:7,6:15:21.05:616,21,0	1/1:2,2:4:6.02:197,6,0	1/1:36,0:35:42.11:781,42,0	1/1:2,4:7:6.02:198,6,0	1/1:6,1:8:3.01:99,3,0	1/1:2,7:9:18.06:592,18,0	./.	1/1:5,3:9:9.03:296,9,0	1/1:4,2:6:6.02:198,6,0	1/1:1,7:8:18.06:593,18,0	./.	1/1:8,5:15:6.02:198,6,0	1/1:7,0:7:11.67:226,12,0	1/1:10,8:19:24.08:734,24,0	1/1:4,3:7:6.02:198,6,0	1/1:4,0:4:3.01:77,3,0	1/1:5,0:6:3.01:79,3,0	1/1:2,4:8:12.03:395,12,0	./.	1/1:3,4:7:9.03:296,9,0	1/1:5,0:9:9.03:236,9,0	1/1:6,0:11:15.05:388,15,0	1/1:1,1:4:9.03:256,9,0
chr10	6220590	.	G	GAA	7197.61	PASS	AC=50;AF=0.926;AN=54;BaseQRankSum=-3.925;DP=459;FS=0.000;HRun=11;HaplotypeScore=64.6376;InbreedingCoeff=0.6040;MQ=53.98;MQ0=17;MQRankSum=2.378;QD=17.47;ReadPosRankSum=1.807;VQSLOD=3.5271;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,2:35:25.92:212,26,0	./.	0/0:23,0:4:8.22:0,8,63	0/0:21,0:8:1.26:0,1,111	1/1:4,7:12:23.93:254,24,0	1/1:7,5:12:25.29:289,25,0	1/1:2,13:15:33.11:463,33,0	1/1:10,0:30:44.46:165,44,0	1/1:4,10:15:18.06:260,18,0	1/1:5,15:20:37.88:389,38,0	1/1:2,7:10:21.03:280,21,0	1/1:9,5:14:30.31:352,30,0	1/1:3,14:18:32.58:397,33,0	1/1:5,4:10:26.53:304,27,0	1/1:3,18:21:45.15:652,45,0	1/1:2,16:20:39.08:527,39,0	1/1:5,22:28:41.62:560,42,0	1/1:4,8:15:24.02:284,24,0	1/1:14,5:19:8.25:328,8,0	1/1:1,13:14:3.97:372,4,0	1/1:4,4:10:3.01:43,3,0	1/1:5,4:10:14.99:178,15,0	1/1:2,8:11:15.01:176,15,0	1/1:1,10:11:15.05:217,15,0	1/1:1,5:6:12.04:174,12,0	1/1:6,0:20:36.01:150,36,0	1/1:2,0:21:34.25:117,34,0	1/1:7,0:10:7.88:54,8,0
chr10	6220857	.	A	ATTATT	1171.21	PASS	AB=0.963;AC=15;AF=0.313;AN=48;BaseQRankSum=4.129;DP=147;FS=2.299;HRun=0;HaplotypeScore=74.2594;InbreedingCoeff=-0.0399;MQ=37.09;MQ0=1;MQRankSum=-2.036;QD=11.15;ReadPosRankSum=-2.212;VQSLOD=1.4660;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:6,0:5:6.98:7,0,101	0/0:1,0:1:3.01:0,3,32	0/0:3,0:2:6.01:0,6,76	./.	0/0:3,0:3:5.93:0,6,64	1/1:4,0:4:3.17:63,3,0	0/0:1,0:1:0.89:0,1,2	0/1:31,0:27:99:271,0,162	0/1:7,0:7:38.14:38,0,218	0/0:4,0:4:12:0,12,198	0/0:2,0:2:6.02:0,6,106	0/0:3,0:3:9.03:0,9,142	0/0:5,0:5:13.81:0,14,164	0/0:4,0:4:11.96:0,12,130	1/1:2,0:2:6.02:69,6,0	1/1:2,0:2:6.01:60,6,0	0/1:10,0:10:92.66:93,0,209	0/0:13,0:13:39.08:0,39,772	0/1:10,0:8:11.20:11,0,347	0/1:3,0:3:24.37:24,0,87	0/0:2,0:2:6.02:0,6,123	./.	./.	0/0:1,0:1:2.99:0,3,24	0/1:10,0:10:68.83:247,0,69	./.	0/1:4,1:4:6.56:118,0,7	0/1:12,3:15:41.85:311,0,42
chr10	6220861	.	A	AT	276.03	PASS	AB=0.842;AC=11;AF=0.239;AN=46;BaseQRankSum=3.886;DP=147;FS=5.769;HRun=1;HaplotypeScore=67.2086;InbreedingCoeff=-0.0500;MQ=35.72;MQ0=1;MQRankSum=-1.109;QD=4.25;ReadPosRankSum=3.650;VQSLOD=0.7299;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:5:10.99:0,11,90	0/0:1,0:1:2.60:0,3,10	./.	./.	0/0:4,0:4:5.60:0,6,46	0/1:3,1:4:1.79:2,0,22	0/0:1,0:1:2.37:0,2,8	0/0:32,0:28:37.10:0,37,239	0/1:6,1:7:8.85:9,0,58	0/0:4,0:4:7.88:0,8,56	0/0:2,0:2:5.05:0,5,43	0/0:3,0:3:8.92:0,9,75	0/0:5,0:5:11.36:0,11,61	0/0:4,0:4:10.74:0,11,67	1/1:0,2:2:5.97:46,6,0	0/1:1,1:2:2.16:19,0,2	0/1:6,1:7:32.63:48,0,33	0/0:14,0:14:41.68:0,42,411	0/1:8,1:7:32.12:32,0,47	0/1:2,1:3:2.78:45,0,3	0/0:2,0:2:6.01:0,6,64	./.	./.	./.	0/1:6,4:10:28.69:97,0,29	0/0:2,0:2:5.36:0,5,21	0/1:5,0:4:12.71:13,0,27	0/1:16,0:16:55.51:93,0,56
chr10	6220863	.	A	ATTATTATT	4173.52	PASS	AB=0.945;AC=34;AF=0.708;AN=48;BaseQRankSum=2.359;DP=150;FS=9.639;HRun=0;HaplotypeScore=75.5941;InbreedingCoeff=-0.1301;MQ=36.11;MQ0=1;MQRankSum=-1.489;QD=28.78;ReadPosRankSum=-1.130;VQSLOD=2.1105;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:6,0:5:82.52:83,0,112	1/1:1,0:1:2.84:14,3,0	./.	./.	0/1:4,0:4:0.08:32,0,0	1/1:3,1:4:12.04:244,12,0	1/1:1,0:1:3.01:37,3,0	1/1:33,0:29:12.25:665,12,0	0/1:6,1:7:48.92:216,0,49	0/1:4,0:4:20.59:21,0,34	0/0:2,0:2:1.77:0,2,9	0/1:3,0:3:0.89:1,0,1	0/1:5,0:5:18.93:132,0,19	1/1:4,0:4:3.12:118,3,0	1/1:0,2:2:6.02:222,6,0	1/1:1,1:2:6.02:185,6,0	0/1:6,1:7:37.81:235,0,38	0/1:14,0:14:49.45:49,0,255	0/1:8,0:7:84:236,0,84	0/1:3,1:4:9.86:137,0,10	0/0:2,0:2:5.94:0,6,41	./.	./.	1/1:1,0:1:2.97:20,3,0	1/1:6,3:10:6.18:661,6,0	1/1:3,0:3:6.02:79,6,0	1/1:5,0:4:12.48:209,12,0	1/1:16,0:16:12.35:577,12,0
chr10	6220864	.	A	AT	342.52	PASS	AB=0.929;AC=17;AF=0.354;AN=48;BaseQRankSum=3.142;DP=153;FS=1.610;HRun=1;HaplotypeScore=68.6212;InbreedingCoeff=-0.0444;MQ=36.73;MQ0=1;MQRankSum=-1.432;QD=3.68;ReadPosRankSum=4.468;VQSLOD=0.4802;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:5:11.45:0,11,96	0/0:1,0:1:2.80:0,3,13	./.	./.	0/0:4,1:5:7.49:0,7,31	0/1:4,0:4:1.13:1,0,26	0/0:2,0:2:2.58:0,3,11	0/0:33,0:29:25.09:0,25,247	0/1:8,0:8:4.39:4,0,66	0/0:5,0:5:8.16:0,8,35	0/0:1,1:2:4.59:0,5,15	1/1:1,2:3:3.96:54,4,0	0/1:1,3:4:0.22:62,0,0	0/1:1,3:4:2.09:26,0,2	1/1:2,0:2:5.94:41,6,0	0/1:2,0:2:2.53:14,0,3	0/1:7,0:7:35.11:45,0,35	0/1:12,1:13:6.29:6,0,88	0/1:9,0:7:4.10:4,0,91	0/1:5,0:5:10.81:38,0,11	0/0:2,0:2:5.19:0,5,20	./.	./.	0/1:1,0:1:0:0,0,0	0/1:10,0:10:39.99:85,0,40	0/0:3,0:3:8.33:0,8,38	0/1:5,0:4:8.39:8,0,33	0/1:16,0:16:54.55:82,0,55
chr10	6220866	.	A	ATTATT	3913.08	PASS	AB=0.988;AC=42;AF=0.840;AN=50;BaseQRankSum=2.890;DP=151;FS=4.595;HRun=0;HaplotypeScore=65.3474;InbreedingCoeff=-0.0536;MQ=36.88;MQ0=1;MQRankSum=-2.246;QD=26.26;ReadPosRankSum=-0.542;VQSLOD=2.9705;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:6,0:5:72.58:89,0,73	1/1:1,0:1:2.96:19,3,0	./.	./.	1/1:4,1:5:11.48:91,11,0	1/1:4,0:4:11.87:176,12,0	1/1:2,0:2:6:51,6,0	1/1:31,0:27:34.34:492,34,0	0/1:8,0:8:10.69:163,0,11	0/1:5,0:5:4.65:102,0,5	1/1:1,1:2:5.50:40,6,0	1/1:1,0:3:7.84:89,8,0	1/1:1,2:4:11.96:230,12,0	1/1:1,3:4:11.96:208,12,0	1/1:2,0:2:6.02:151,6,0	1/1:2,0:2:6.02:119,6,0	0/1:7,0:7:14.51:167,0,15	0/1:12,1:13:87.48:87,0,101	0/1:9,0:7:46.41:179,0,46	1/1:5,0:5:4.82:149,5,0	0/0:2,0:2:5.87:0,6,35	1/1:1,0:1:3:25,3,0	./.	1/1:1,0:1:3.01:40,3,0	1/1:9,0:9:14.35:494,14,0	1/1:3,0:3:8.99:139,9,0	1/1:5,0:4:12.79:150,13,0	1/1:17,0:17:22.92:463,23,0
chr10	6220871	.	T	TTATTATTAT	6644.58	PASS	AC=48;AF=1.000;AN=48;DP=157;FS=0.000;HRun=0;HaplotypeScore=63.7657;InbreedingCoeff=0.0766;MQ=39.62;MQ0=1;QD=43.15;VQSLOD=4.1682;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,0:5:9.03:154,9,0	1/1:1,0:1:3.01:60,3,0	./.	./.	1/1:5,0:5:12.04:203,12,0	1/1:6,0:6:15.04:345,15,0	1/1:3,0:3:6.02:113,6,0	1/1:31,0:27:48.16:973,48,0	1/1:8,0:8:15.05:380,15,0	1/1:6,0:6:15.05:302,15,0	1/1:2,0:2:6.02:109,6,0	1/1:3,0:3:6.02:102,6,0	1/1:4,0:4:12.04:287,12,0	1/1:5,0:5:12.04:267,12,0	1/1:2,0:2:6.02:274,6,0	1/1:3,0:3:9.02:238,9,0	1/1:5,4:9:5.98:156,6,0	1/1:13,0:13:12.04:266,12,0	1/1:11,0:9:18:406,18,0	1/1:4,0:4:9.03:261,9,0	./.	1/1:1,0:1:3.01:53,3,0	./.	1/1:1,0:1:0.89:2,1,0	1/1:9,0:9:24.08:724,24,0	1/1:3,0:3:9.03:159,9,0	1/1:6,0:5:9.03:201,9,0	1/1:12,0:12:27.06:610,27,0
chr10	6222961	.	C	CGCTTTG	6964.30	PASS	AB=0.538;AC=9;AF=0.161;AN=56;BaseQRankSum=-7.582;DP=574;FS=8.568;HRun=0;HaplotypeScore=136.8052;InbreedingCoeff=0.8320;MQ=64.50;MQ0=0;MQRankSum=-11.475;QD=57.56;ReadPosRankSum=-0.214;VQSLOD=4.9263;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,25:34:54.10:1731,54,0	0/0:15,0:15:39.12:0,39,814	0/0:22,0:19:49.22:0,49,880	0/0:18,0:18:3.91:0,4,562	0/0:16,0:16:42.08:0,42,857	0/0:16,0:16:48.15:0,48,990	0/0:19,0:19:45.11:0,45,864	1/1:7,14:23:47.88:1074,48,0	0/0:18,0:18:39.05:0,39,750	0/0:28,0:28:80.98:0,81,1468	0/0:15,0:15:41.94:0,42,907	0/0:20,0:20:54.17:0,54,1128	0/0:26,0:26:75.05:0,75,1591	0/0:17,0:17:36.11:0,36,712	0/0:17,0:17:45.14:0,45,946	0/0:18,0:18:51.13:0,51,993	0/0:34,0:34:96.31:0,96,2060	0/0:12,0:12:27.09:0,27,568	0/0:11,0:11:27.04:0,27,495	0/0:23,0:23:62.92:0,63,1248	0/0:21,0:21:42.13:0,42,865	0/0:22,0:22:45.15:0,45,973	0/0:18,0:18:48.15:0,48,1006	0/0:26,0:25:66.10:0,66,1211	0/0:21,0:21:59.95:0,60,1196	0/1:4,22:28:56.45:1941,0,56	1/1:7,16:26:45.15:1508,45,0	1/1:1,8:10:21.07:711,21,0
chr10	6223971	.	CGGG	C	7258.16	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=-2.402;DP=372;FS=3.768;HRun=12;HaplotypeScore=65.2420;InbreedingCoeff=0.9346;MQ=85.11;MQ0=3;MQRankSum=-2.959;QD=27.29;ReadPosRankSum=6.500;VQSLOD=3.7186;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:8:10.23:0,10,108	1/1:1,6:7:15.04:190,15,0	0/0:28,0:23:16.19:0,16,214	0/0:15,0:13:15.28:0,15,147	1/1:5,17:23:48.04:587,48,0	1/1:2,17:19:42.12:530,42,0	1/1:1,5:6:18.06:227,18,0	0/0:12,0:13:19.30:0,19,299	1/1:2,9:11:24.07:303,24,0	1/1:3,12:15:33.07:417,33,0	1/1:7,17:24:54.16:680,54,0	1/1:3,9:12:27.06:341,27,0	1/1:0,7:7:18.06:227,18,0	1/1:2,9:11:30.09:379,30,0	1/1:2,12:15:36.04:435,36,0	1/1:0,10:10:27.09:341,27,0	1/1:2,13:14:33.10:417,33,0	1/1:3,8:11:24.06:303,24,0	1/1:3,11:14:31.64:385,32,0	1/1:3,12:14:36.09:454,36,0	1/1:1,4:5:6.01:76,6,0	1/1:2,0:12:26.52:172,27,0	1/1:4,13:17:36.11:455,36,0	1/1:1,3:4:5.68:75,6,0	1/1:6,6:12:21:265,21,0	0/0:9,0:12:18.02:0,18,227	0/0:18,0:20:42.14:0,42,772	0/0:7,0:8:15.03:0,15,228
chr10	6223981	.	GGGT	G	2465.12	PASS	AB=0.971;AC=35;AF=0.625;AN=56;BaseQRankSum=6.318;DP=344;FS=0.938;HRun=0;HaplotypeScore=77.2945;InbreedingCoeff=0.2918;MQ=80.61;MQ0=3;MQRankSum=-1.667;QD=9.10;ReadPosRankSum=10.434;VQSLOD=1.3836;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:20.54:0,21,241	1/1:6,0:6:14.12:75,14,0	0/1:28,0:20:6.33:6,0,340	0/0:14,0:12:11.01:0,11,183	1/1:20,0:20:0.78:174,1,0	1/1:17,0:17:39.50:221,40,0	0/1:9,1:10:46.76:80,0,47	0/0:18,0:18:50.56:0,51,560	1/1:9,0:9:22.81:131,23,0	0/1:13,0:13:14.86:123,0,15	1/1:17,2:19:51.28:337,51,0	1/1:9,0:9:25.02:126,25,0	0/1:8,0:8:1.16:67,0,1	1/1:10,1:11:6.27:130,6,0	0/1:15,0:15:4.98:130,0,5	1/1:11,0:11:4.58:119,5,0	1/1:13,0:13:31.12:161,31,0	0/1:10,0:10:15.05:92,0,15	0/1:14,1:14:24.29:155,0,24	0/1:15,2:16:49.58:219,0,50	1/1:4,0:4:5.60:26,6,0	0/1:11,0:11:2.59:3,0,10	1/1:14,0:14:9.54:137,10,0	1/1:3,0:3:5.35:34,5,0	1/1:7,1:8:4.59:103,5,0	0/0:9,0:9:26.97:0,27,296	0/0:15,0:15:42.14:0,42,840	0/0:8,0:8:21.03:0,21,319
chr10	6224284	.	C	CT	2963.63	PASS	AB=0.827;AC=50;AF=0.893;AN=56;BaseQRankSum=0.596;DP=285;FS=16.214;HRun=11;HaplotypeScore=122.3750;InbreedingCoeff=0.4567;MQ=55.18;MQ0=0;MQRankSum=-2.996;QD=10.94;ReadPosRankSum=-0.214;VQSLOD=1.3264;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:15,14:32:6.90:448,0,7	1/1:4,0:5:11.24:57,11,0	0/0:7,1:7:2.34:0,2,14	0/0:6,0:6:10.27:0,10,50	1/1:11,0:14:19.27:103,19,0	1/1:11,0:13:24.27:148,24,0	1/1:4,0:4:0.47:1,0,0	1/1:5,14:21:27.18:382,27,0	1/1:7,0:9:15.45:81,15,0	1/1:5,0:6:15.36:86,15,0	1/1:10,0:13:29.17:177,29,0	1/1:9,0:9:9.55:55,10,0	1/1:10,0:10:4.19:21,4,0	1/1:10,0:10:18.95:117,19,0	1/1:9,0:9:9.40:59,9,0	1/1:8,0:9:17.74:86,18,0	1/1:8,0:9:8.65:49,9,0	1/1:10,0:10:15.06:91,15,0	1/1:17,0:16:27.83:154,28,0	1/1:8,0:7:17.26:102,17,0	0/1:1,0:1:0:0,0,0	1/1:6,0:6:6.61:37,7,0	1/1:6,0:6:11.69:71,12,0	1/1:7,0:7:2.92:17,3,0	1/1:6,0:7:10.94:58,11,0	1/1:5,10:15:29.60:270,30,0	1/1:8,9:17:22.30:380,22,0	1/1:2,1:3:3.01:30,3,0
chr10	6224342	.	CT	C	2657.72	PASS	AB=0.736;AC=47;AF=0.839;AN=56;BaseQRankSum=-1.689;DP=226;FS=27.679;HRun=13;HaplotypeScore=49.3949;InbreedingCoeff=-0.0208;MQ=62.92;MQ0=2;MQRankSum=1.102;QD=11.86;ReadPosRankSum=4.352;VQSLOD=1.2243;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:11,19:30:30.17:372,30,0	1/1:0,2:2:5.97:44,6,0	0/1:9,1:6:7.25:7,0,63	0/1:10,0:7:14:14,0,39	1/1:2,9:13:3.20:140,3,0	1/1:2,6:8:17.87:131,18,0	1/1:0,2:2:5.97:44,6,0	1/1:8,11:20:11.49:180,11,0	1/1:3,5:8:3.27:95,3,0	0/1:3,5:8:8.34:105,0,8	0/1:3,6:9:7.31:73,0,7	1/1:0,4:4:8.95:66,9,0	1/1:3,3:6:8.94:66,9,0	0/0:2,0:2:3:0,3,29	1/1:1,4:5:11.93:88,12,0	1/1:1,7:8:17.86:131,18,0	1/1:4,4:7:15.33:110,15,0	1/1:2,7:9:22.84:159,23,0	1/1:5,10:15:3.59:188,4,0	1/1:3,6:9:20.84:151,21,0	1/1:1,1:2:5.97:44,6,0	1/1:1,1:2:2.82:21,3,0	1/1:0,3:3:8.95:66,9,0	0/1:3,3:6:7.48:54,0,7	1/1:0,4:4:11.93:87,12,0	0/1:5,4:9:2.27:91,0,2	1/1:1,10:12:34.85:246,35,0	0/1:1,1:2:8.62:16,0,9
chr10	6227583	.	A	AT	12229.89	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-5.133;DP=479;FS=11.044;HRun=7;HaplotypeScore=39.5310;InbreedingCoeff=0.9230;MQ=50.96;MQ0=24;MQRankSum=-1.030;QD=27.73;ReadPosRankSum=4.479;VQSLOD=4.4669;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,17:18:42.13:507,42,0	1/1:0,6:6:15.05:181,15,0	0/0:17,0:9:8.77:0,9,179	0/0:21,0:7:11.79:0,12,85	1/1:2,16:16:42.13:507,42,0	1/1:2,13:14:33.10:398,33,0	1/1:2,8:10:15.40:213,15,0	1/1:1,18:18:51.11:580,51,0	1/1:2,19:19:48.15:579,48,0	1/1:2,26:28:81.25:975,81,0	1/1:2,14:14:36.11:435,36,0	1/1:2,10:11:24.07:290,24,0	1/1:0,13:13:33.10:398,33,0	1/1:3,19:20:54.17:652,54,0	1/1:3,7:8:21.06:245,21,0	1/1:2,14:14:42.13:507,42,0	1/1:3,25:27:63.19:761,63,0	1/1:0,10:10:27.08:326,27,0	1/1:2,16:17:51.01:582,51,0	1/1:2,20:20:44.99:543,45,0	1/1:3,11:11:21.06:254,21,0	1/1:3,16:16:39.12:471,39,0	1/1:1,21:21:51.16:616,51,0	1/1:1,8:9:18.06:217,18,0	1/1:3,11:13:24.07:290,24,0	1/1:1,24:23:69.21:833,69,0	1/1:3,15:16:42.13:506,42,0	1/1:1,12:12:30.09:362,30,0
chr10	6227810	.	CT	C	3650.45	PASS	AB=0.642;AC=41;AF=0.759;AN=54;BaseQRankSum=3.322;DP=363;FS=16.148;HRun=13;HaplotypeScore=42.3333;InbreedingCoeff=0.1368;MQ=55.56;MQ0=7;MQRankSum=0.082;QD=11.89;ReadPosRankSum=3.700;VQSLOD=1.5484;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,2:39:25.95:0,26,626	./.	0/0:14,1:4:5.88:0,6,44	0/1:14,0:8:5.04:5,0,60	1/1:3,5:8:11.92:87,12,0	1/1:0,4:5:13.97:93,14,0	0/1:7,9:15:2.30:148,0,2	1/1:6,15:19:39.33:271,39,0	1/1:9,10:20:35.73:260,36,0	1/1:4,14:18:36.99:264,37,0	0/1:2,5:7:17.21:54,0,17	0/1:3,4:7:7.83:73,0,8	0/1:4,6:10:6.20:91,0,6	1/1:2,9:12:25.89:181,26,0	1/1:0,6:6:8.95:66,9,0	1/1:1,8:9:23.86:175,24,0	1/1:5,18:24:26.53:348,27,0	0/1:2,6:9:12.22:76,0,12	1/1:5,12:14:29.80:217,30,0	1/1:3,4:7:5.97:44,6,0	1/1:4,19:26:27.64:339,28,0	0/1:1,9:10:6.83:91,0,7	1/1:2,7:9:20.69:145,21,0	1/1:2,11:15:36.85:252,37,0	0/1:4,5:12:0.76:103,0,1	1/1:5,5:9:14.85:109,15,0	0/1:3,6:9:34.48:107,0,34	1/1:0,2:4:8:50,8,0
chr10	6228838	.	C	CT	3101.84	PASS	AC=40;AF=0.909;AN=44;BaseQRankSum=-2.917;DP=190;FS=30.652;HRun=3;HaplotypeScore=14.3113;InbreedingCoeff=0.3185;MQ=29.74;MQ0=36;MQRankSum=-0.988;QD=19.27;ReadPosRankSum=-0.121;VQSLOD=1.3511;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,3:3:2.97:20,3,0	./.	0/0:6,0:1:3.01:0,3,33	0/0:3,0:2:3.01:0,3,36	./.	1/1:2,11:11:24.08:327,24,0	1/1:0,5:4:9.03:126,9,0	1/1:8,5:5:15.05:210,15,0	1/1:3,7:10:23.97:271,24,0	1/1:4,4:4:6.02:84,6,0	./.	1/1:1,5:5:12.01:146,12,0	1/1:2,8:7:21.04:272,21,0	1/1:7,8:13:6.12:292,6,0	1/1:2,8:7:18.06:251,18,0	1/1:3,4:5:15.05:202,15,0	./.	1/1:0,2:1:3.01:42,3,0	1/1:7,4:4:12.04:164,12,0	./.	1/1:2,1:1:3.01:42,3,0	1/1:4,2:3:3.01:42,3,0	1/1:5,2:1:3.01:42,3,0	1/1:0,3:3:3.01:42,3,0	./.	1/1:3,8:9:21.07:294,21,0	1/1:2,8:8:21.07:293,21,0	1/1:3,3:1:3.01:42,3,0
chr10	6232337	.	TG	T	930.62	PASS	AB=0.825;AC=13;AF=0.813;AN=16;BaseQRankSum=2.681;DP=484;FS=0.000;HRun=1;HaplotypeScore=19.3918;MQ=9.07;MQ0=415;MQRankSum=-0.501;QD=4.41;ReadPosRankSum=0.501;VQSLOD=0.1872;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	1/1:28,7:4:9.03:124,9,0	./.	./.	./.	./.	./.	1/1:11,5:3:5.98:61,6,0	./.	./.	./.	./.	./.	./.	./.	./.	0/1:15,8:10:69.77:186,0,70	./.	0/1:32,8:6:36.32:74,0,36	1/1:21,14:11:27.01:331,27,0	./.	0/1:16,2:4:36.45:74,0,36	1/1:22,5:3:9.03:125,9,0	./.	1/1:15,2:2:3.01:42,3,0
chr10	6233987	.	GA	G	14310.41	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-2.103;DP=614;FS=1.927;HRun=1;HaplotypeScore=64.1810;InbreedingCoeff=0.9010;MQ=55.47;MQ0=35;MQRankSum=1.542;QD=25.97;ReadPosRankSum=4.706;VQSLOD=4.8286;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,46:44:69.19:930,69,0	1/1:0,5:5:12.04:167,12,0	0/0:31,0:14:42.12:0,42,581	0/0:32,0:6:14.88:0,15,173	1/1:2,21:23:48.08:669,48,0	1/1:0,26:26:36.12:502,36,0	1/1:1,24:25:12.79:722,13,0	1/1:6,7:4:5.60:66,6,0	1/1:0,23:23:42.14:586,42,0	1/1:4,27:29:69.16:922,69,0	1/1:0,12:12:17.97:226,18,0	1/1:5,8:11:20.75:251,21,0	1/1:1,20:20:27.08:377,27,0	1/1:0,25:25:47.88:669,48,0	1/1:0,21:21:33.11:460,33,0	1/1:2,8:10:24.08:335,24,0	1/1:3,34:34:72.24:1005,72,0	1/1:0,16:15:39.09:523,39,0	1/1:3,13:13:36.08:466,36,0	1/1:2,11:11:27.09:376,27,0	1/1:2,47:47:99:1394,105,0	1/1:0,16:16:27.05:355,27,0	1/1:0,21:20:51.17:706,51,0	1/1:0,25:25:47.97:670,48,0	1/1:5,12:16:32.69:413,33,0	1/1:1,15:16:45.15:621,45,0	1/1:0,20:19:42.10:564,42,0	1/1:1,10:10:24.08:335,24,0
chr10	6235060	.	TTGTGTG	T	3688.77	PASS	AB=0.718;AC=46;AF=0.852;AN=54;BaseQRankSum=1.712;DP=448;FS=0.000;HRun=0;HaplotypeScore=119.9388;InbreedingCoeff=0.1574;MQ=58.58;MQ0=15;MQRankSum=2.452;QD=9.73;ReadPosRankSum=2.699;VQSLOD=2.2401;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:21:8.35:98,8,0	1/1:5,4:9:3.01:61,3,0	./.	0/0:32,0:19:8.97:0,9,84	1/1:6,1:8:5.97:67,6,0	0/1:10,7:19:16.29:276,0,16	1/1:4,4:8:6.02:122,6,0	0/1:23,0:22:11.84:71,0,12	1/1:14,7:23:15.92:253,16,0	1/1:15,3:19:21.07:393,21,0	1/1:9,4:13:15.03:265,15,0	1/1:13,4:17:12.03:172,12,0	1/1:7,3:9:6.02:122,6,0	1/1:9,4:13:3.01:42,3,0	1/1:6,6:13:6.02:122,6,0	1/1:3,1:5:12.04:219,12,0	1/1:15,8:23:5.96:122,6,0	0/1:4,4:9:52.72:55,0,53	1/1:7,0:7:3.01:40,3,0	1/1:13,8:22:5.97:81,6,0	1/1:17,0:19:9.03:173,9,0	0/0:3,3:7:0:0,0,0	1/1:11,6:20:2.91:42,3,0	0/1:2,9:11:0.01:0,0,0	1/1:7,4:13:12.04:242,12,0	1/1:14,2:20:29.55:408,30,0	1/1:9,0:19:20.73:139,21,0	1/1:7,0:8:8.94:103,9,0
chr10	6235828	.	A	AAAAT	21508.40	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-3.825;DP=456;FS=2.142;HRun=0;HaplotypeScore=82.1634;InbreedingCoeff=0.8830;MQ=65.59;MQ0=0;MQRankSum=-4.853;QD=49.44;ReadPosRankSum=3.095;VQSLOD=5.5170;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,16:24:45.15:1149,45,0	1/1:2,3:6:6.02:153,6,0	0/0:8,0:7:18.03:0,18,261	0/0:13,0:13:27.01:0,27,415	1/1:4,22:26:60.20:1349,60,0	1/1:1,7:8:15.05:387,15,0	1/1:3,8:11:18.06:425,18,0	1/1:9,22:32:69.22:1551,69,0	1/1:1,8:10:21.07:542,21,0	1/1:2,21:25:66.22:1584,66,0	1/1:7,16:23:48.16:1159,48,0	1/1:5,8:13:24.08:619,24,0	1/1:4,10:15:26.78:696,27,0	1/1:2,13:17:33.11:844,33,0	1/1:5,11:17:24.08:615,24,0	1/1:2,9:11:21.07:542,21,0	1/1:7,11:20:27.09:652,27,0	1/1:7,10:17:38.31:845,38,0	1/1:0,15:15:45.15:1160,45,0	1/1:6,14:21:39.13:899,39,0	1/1:3,5:8:12.04:309,12,0	1/1:1,5:6:12.04:272,12,0	1/1:3,14:17:38.85:939,39,0	1/1:2,7:9:18.06:463,18,0	1/1:5,15:21:39.13:969,39,0	1/1:0,16:16:48.16:1160,48,0	1/1:8,27:36:66.70:1696,67,0	1/1:2,7:9:12.43:530,12,0
chr10	6236338	.	GTTTTTGT	G	3113.94	PASS	AB=0.967;AC=23;AF=0.411;AN=56;BaseQRankSum=-9.020;DP=470;FS=1.337;HRun=0;HaplotypeScore=129.7223;InbreedingCoeff=-0.2389;MQ=62.19;MQ0=3;MQRankSum=-1.399;QD=8.35;ReadPosRankSum=-9.299;VQSLOD=-0.2494;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:12,0:12:45.36:45,0,423	0/0:7,0:7:18.06:0,18,423	0/0:16,0:7:13.92:0,14,220	0/0:16,0:8:14.53:0,15,303	0/1:33,0:33:11.35:11,0,1902	0/1:13,0:13:45.06:45,0,503	0/0:4,0:4:9.02:0,9,166	1/1:6,16:22:47.91:569,48,0	0/0:17,0:17:22.09:0,22,1009	0/1:23,0:23:90.08:90,0,1039	0/1:29,0:28:77.33:77,0,1323	0/0:11,0:11:7.06:0,7,663	0/0:17,0:17:14.71:0,15,852	0/1:13,0:13:26.41:26,0,401	0/1:15,0:15:13.87:14,0,613	0/1:15,0:15:13.10:13,0,564	0/1:24,0:24:0.69:1,0,1092	0/1:14,0:14:41.65:42,0,519	0/1:18,0:18:42.93:43,0,603	0/1:27,0:27:75.11:75,0,1327	0/0:9,0:9:24.08:0,24,547	0/1:12,1:13:99:121,0,477	0/1:27,0:27:11.16:11,0,1146	0/1:10,0:10:7.65:8,0,267	0/1:21,0:21:26.74:27,0,866	0/1:1,17:18:18.86:941,0,19	1/1:3,17:20:36.12:900,36,0	1/1:0,5:5:9.03:225,9,0
chr10	6236344	.	GT	G	8009.88	PASS	AB=0.667;AC=51;AF=0.911;AN=56;BaseQRankSum=-4.070;DP=462;FS=7.598;HRun=10;HaplotypeScore=62.8630;InbreedingCoeff=0.6743;MQ=62.57;MQ0=3;MQRankSum=2.135;QD=18.46;ReadPosRankSum=2.204;VQSLOD=5.5973;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:13:21.44:132,21,0	1/1:0,7:7:18:156,18,0	0/0:13,1:6:13.52:0,14,72	0/0:14,0:7:1.42:0,1,60	1/1:5,31:36:86.94:755,87,0	1/1:1,14:15:29.99:260,30,0	1/1:0,5:5:9:78,9,0	1/1:18,0:18:35.55:279,36,0	1/1:2,15:17:41.98:365,42,0	1/1:3,22:25:65.95:568,66,0	1/1:6,22:27:62.96:545,63,0	1/1:2,10:12:26.99:234,27,0	1/1:3,15:18:38.96:339,39,0	1/1:0,13:13:29.99:260,30,0	1/1:1,13:14:38.99:339,39,0	1/1:3,12:15:29.99:260,30,0	1/1:2,23:25:42.22:454,42,0	1/1:2,11:13:26.66:234,27,0	1/1:5,11:16:32.96:280,33,0	1/1:1,25:26:71.97:625,72,0	1/1:1,7:8:20.99:182,21,0	1/1:2,11:13:35.79:300,36,0	1/1:5,21:26:50.97:442,51,0	0/1:5,5:10:1.41:89,0,1	1/1:3,16:20:47.01:397,47,0	1/1:17,1:18:40.02:237,40,0	1/1:17,0:17:33.57:159,34,0	1/1:5,0:5:8.39:40,8,0
chr10	6236452	.	GT	G	7426.21	PASS	AB=0.726;AC=48;AF=0.857;AN=56;BaseQRankSum=3.087;DP=509;FS=2.169;HRun=11;HaplotypeScore=52.8381;InbreedingCoeff=0.2046;MQ=61.20;MQ0=1;MQRankSum=-0.028;QD=15.34;ReadPosRankSum=1.516;VQSLOD=5.4301;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:26.71:0,27,485	0/1:2,8:11:2.98:174,0,3	0/1:13,1:8:23.11:23,0,59	0/1:10,0:5:2.05:2,0,47	1/1:4,20:24:52.21:440,52,0	1/1:3,16:19:41.93:345,42,0	0/1:3,3:6:12.15:62,0,12	1/1:10,25:34:34.10:539,34,0	1/1:7,15:22:18.94:362,19,0	1/1:6,15:22:43.96:351,44,0	1/1:4,23:28:38.89:516,39,0	1/1:4,9:13:20.95:172,21,0	1/1:5,7:12:29.94:246,30,0	0/1:3,8:11:2.03:191,0,2	1/1:3,12:16:26:203,26,0	1/1:1,13:14:26.96:222,27,0	1/1:5,26:31:7.98:478,8,0	1/1:2,12:14:32.95:271,33,0	0/1:6,9:15:5.13:184,0,5	1/1:8,19:28:1.23:366,1,0	1/1:2,6:8:17.97:148,18,0	1/1:3,16:20:49.98:400,50,0	1/1:6,12:18:3.72:239,4,0	1/1:2,17:20:43.99:351,44,0	1/1:6,13:19:9.94:288,10,0	1/1:8,18:26:56.87:461,57,0	1/1:4,13:17:8.04:221,8,0	1/1:2,9:11:20.97:172,21,0
chr10	6242740	.	A	AC	2680.49	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=0.880;DP=525;FS=8.089;HRun=5;HaplotypeScore=61.1667;InbreedingCoeff=0.9920;MQ=86.86;MQ0=0;MQRankSum=-1.733;QD=30.81;ReadPosRankSum=1.906;VQSLOD=4.2394;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,102,1096	0/0:9,0:9:27.07:0,27,290	0/0:16,0:16:45.11:0,45,479	0/0:25,0:25:28.08:0,28,606	0/0:21,0:21:60.15:0,60,645	0/0:18,0:18:48.12:0,48,516	0/0:18,0:18:48.07:0,48,496	0/0:32,0:32:84.20:0,84,897	0/0:26,0:26:72.18:0,72,774	0/0:15,0:15:42.11:0,42,451	0/0:14,0:14:42.11:0,42,451	1/1:1,13:14:39.13:513,39,0	1/1:0,16:16:42.14:553,42,0	1/1:1,24:25:57.19:749,57,0	0/0:14,0:14:39.10:0,39,419	0/0:15,0:15:36.07:0,36,379	0/0:14,0:14:36.09:0,36,387	0/0:15,0:15:42.07:0,42,439	0/0:18,0:18:53.15:0,53,541	0/0:26,0:26:72.17:0,72,767	0/0:27,0:27:66.14:0,66,700	0/0:16,0:16:45.09:0,45,471	1/1:0,19:19:48.07:607,48,0	1/1:1,12:13:33.11:434,33,0	0/0:12,0:12:27.07:0,27,290	0/0:19,0:19:51.11:0,51,536	0/0:22,0:22:63.16:0,63,676	0/0:4,0:4:12.03:0,12,129
chr10	6242931	.	T	TA	7441.24	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-1.461;DP=443;FS=7.654;HRun=7;HaplotypeScore=55.0140;InbreedingCoeff=0.9577;MQ=73.50;MQ0=0;MQRankSum=-0.596;QD=29.18;ReadPosRankSum=-0.548;VQSLOD=5.0866;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:48.08:0,48,463	1/1:0,9:9:24.07:290,24,0	0/0:13,0:12:11.46:0,11,157	0/0:6,0:6:7.26:0,7,62	1/1:1,21:22:57.17:688,57,0	0/0:16,0:16:45.06:0,45,429	0/0:4,0:4:12.02:0,12,116	1/1:4,22:26:66.19:784,66,0	0/0:14,0:14:39.02:0,39,368	1/1:5,17:22:51.11:588,51,0	1/1:2,18:20:54.12:632,54,0	1/1:2,15:17:36.11:435,36,0	1/1:1,9:10:24.07:290,24,0	1/1:3,15:18:51.05:593,51,0	0/0:15,0:15:33.04:0,33,318	0/0:7,0:7:18.03:0,18,174	0/0:24,0:24:63.10:0,63,608	1/1:1,21:22:54.17:652,54,0	0/0:16,0:16:30.04:0,30,290	0/0:20,0:20:54.02:0,54,511	1/1:0,5:5:12.04:145,12,0	0/0:10,0:10:24.04:0,24,232	1/1:4,22:26:63.19:761,63,0	1/1:0,8:8:18.06:217,18,0	0/0:27,0:27:78.10:0,78,742	1/1:1,27:28:81.24:968,81,0	1/1:7,10:16:27.08:326,27,0	1/1:0,5:5:6.02:72,6,0
chr10	6243210	.	TC	T	10449.47	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=12.482;DP=572;FS=5.343;HRun=3;HaplotypeScore=64.2175;InbreedingCoeff=0.9948;MQ=76.26;MQ0=0;MQRankSum=-1.676;QD=32.96;ReadPosRankSum=-0.607;VQSLOD=4.7803;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,99,1424	1/1:0,5:5:12.04:149,12,0	0/0:15,0:14:41.96:0,42,547	0/0:15,0:15:33.06:0,33,517	1/1:0,20:20:57.18:705,57,0	0/0:17,0:17:51.17:0,51,734	0/0:32,0:32:96.31:0,96,1358	1/1:2,22:24:66.19:805,66,0	0/0:26,0:26:75.25:0,75,1080	1/1:0,26:26:72.23:892,72,0	1/1:1,12:13:33.10:407,33,0	1/1:0,21:21:60.19:743,60,0	1/1:2,21:23:60.19:744,60,0	1/1:1,19:20:48.15:595,48,0	0/0:18,0:18:51.17:0,51,734	0/0:11,0:11:30.09:0,30,414	0/0:25,0:25:72.21:0,72,1000	1/1:1,22:23:66.21:818,66,0	0/0:16,0:16:48.15:0,48,674	0/0:26,0:26:78.26:0,78,1120	1/1:0,29:29:78.25:966,78,0	0/0:8,0:8:24.08:0,24,346	1/1:1,20:21:50.92:632,51,0	1/1:1,32:33:87.27:1076,87,0	0/0:12,0:12:33.11:0,33,475	1/1:4,26:30:75.21:915,75,0	1/1:0,22:22:59.80:743,60,0	1/1:0,7:7:21.07:260,21,0
chr10	6244298	.	A	AGTGTGTGTGT	5921.08	PASS	AB=0.991;AC=32;AF=0.571;AN=56;BaseQRankSum=9.283;DP=543;FS=19.198;HRun=0;HaplotypeScore=190.7705;InbreedingCoeff=-0.4661;MQ=62.00;MQ0=9;MQRankSum=-5.947;QD=12.71;ReadPosRankSum=-2.939;VQSLOD=1.9364;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:28:99:233,0,230	0/1:10,0:10:13.05:13,0,84	0/0:33,0:19:42.63:0,43,655	0/0:44,0:26:37.40:0,37,545	0/1:23,0:23:99:126,0,127	0/1:19,0:19:79.75:80,0,296	0/1:19,0:21:75.97:276,0,76	1/1:25,0:25:22.64:552,23,0	0/1:18,0:19:99:183,0,228	0/1:18,0:18:99:419,0,366	0/1:17,0:17:15.51:122,0,16	0/1:17,0:17:99:151,0,216	0/1:21,0:20:99:350,0,238	0/1:21,0:21:6.95:7,0,137	0/1:20,0:20:99:483,0,211	1/1:7,0:7:9.03:314,9,0	0/1:18,0:18:22.18:22,0,325	0/1:15,0:15:99:412,0,208	0/1:22,0:20:99:256,0,391	0/1:22,0:22:99:489,0,183	0/1:25,0:23:2.25:2,0,221	0/1:16,0:16:90.54:91,0,157	1/1:9,0:9:2.99:24,3,0	0/1:14,0:13:35.98:36,0,61	0/1:4,0:4:19.98:98,0,20	1/1:4,0:18:28.66:652,29,0	1/1:8,9:27:2.68:283,3,0	1/1:0,1:10:6.02:247,6,0
chr10	6244304	.	A	AGTGTGTGTGTGTGT	10378.16	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-1.841;DP=579;FS=3.860;HRun=0;HaplotypeScore=201.7913;InbreedingCoeff=0.4584;MQ=56.29;MQ0=10;MQRankSum=-2.584;QD=21.01;ReadPosRankSum=2.030;VQSLOD=4.0168;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:35:20.82:407,21,0	1/1:10,0:10:9:99,9,0	0/0:39,0:20:6.33:0,6,405	0/0:46,0:25:8.82:0,9,143	1/1:22,0:22:10.25:292,10,0	1/1:13,6:23:3.01:202,3,0	1/1:20,0:20:21.96:608,22,0	1/1:24,0:24:23.05:431,23,0	1/1:15,2:22:8.96:422,9,0	1/1:17,0:17:27.08:728,27,0	1/1:17,0:17:12.03:307,12,0	1/1:19,0:19:15.01:350,15,0	1/1:22,0:21:20.34:576,20,0	1/1:20,0:20:7.56:78,8,0	1/1:11,6:23:15.94:953,16,0	1/1:3,4:10:9.03:606,9,0	1/1:15,0:15:5.98:121,6,0	1/1:16,0:16:9.68:679,10,0	1/1:22,0:20:24.84:591,25,0	1/1:15,6:30:15.05:1009,15,0	1/1:25,0:23:12.87:274,13,0	1/1:12,1:19:3.01:143,3,0	1/1:9,0:9:3.01:49,3,0	1/1:13,0:12:9.03:280,9,0	1/1:2,2:12:3.01:202,3,0	1/1:14,0:14:21.06:515,21,0	1/1:28,0:28:12:267,12,0	1/1:7,0:7:6.02:189,6,0
chr10	6248219	.	TG	T	4743.44	PASS	AB=0.933;AC=53;AF=0.946;AN=56;BaseQRankSum=-2.666;DP=254;FS=4.048;HRun=8;HaplotypeScore=30.6671;InbreedingCoeff=0.4575;MQ=57.14;MQ0=3;MQRankSum=5.288;QD=19.85;ReadPosRankSum=2.294;VQSLOD=4.1773;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,10:10:27.04:261,27,0	1/1:0,5:5:15.02:145,15,0	0/0:15,0:6:18.04:0,18,205	0/1:13,1:9:18.34:18,0,193	1/1:0,4:4:6.01:58,6,0	1/1:0,8:8:24.04:232,24,0	1/1:3,11:13:25.86:237,26,0	1/1:0,0:10:12.22:36,12,0	1/1:1,5:6:15.02:145,15,0	1/1:0,6:6:15.02:145,15,0	1/1:1,5:6:15.02:145,15,0	1/1:0,7:7:18.03:174,18,0	1/1:2,6:8:21.03:201,21,0	1/1:2,5:7:12.01:116,12,0	1/1:1,10:11:30.05:290,30,0	1/1:0,3:3:9.01:87,9,0	1/1:0,18:18:48.08:463,48,0	1/1:1,9:10:24.04:232,24,0	1/1:1,4:4:9.01:87,9,0	1/1:1,11:12:27.04:261,27,0	1/1:1,21:22:51.08:493,51,0	1/1:0,12:12:30.05:290,30,0	1/1:0,4:4:12.02:116,12,0	1/1:0,9:9:27.04:261,27,0	1/1:0,3:3:9.01:87,9,0	1/1:0,1:13:25.41:95,25,0	1/1:1,0:8:16.30:48,16,0	1/1:0,0:4:8.15:24,8,0
chr10	6250318	.	TC	T	2993.29	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=6.792;DP=502;FS=0.943;HRun=3;HaplotypeScore=55.8899;InbreedingCoeff=0.9864;MQ=59.56;MQ0=0;MQRankSum=-0.001;QD=31.84;ReadPosRankSum=0.938;VQSLOD=3.6419;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:81.67:0,82,1129	0/0:5,0:5:12.04:0,12,173	0/0:16,0:16:41.98:0,42,533	0/0:5,0:6:15.05:0,15,216	0/0:22,0:22:66.22:0,66,948	0/0:13,0:13:39.13:0,39,561	0/0:12,0:12:36.12:0,36,518	1/1:1,29:25:75.21:896,75,0	0/0:17,0:17:48.14:0,48,655	0/0:21,0:21:63.20:0,63,891	0/0:23,0:23:69.22:0,69,974	0/0:14,0:14:42.14:0,42,592	0/0:14,0:14:39.13:0,39,559	0/0:11,0:11:33.09:0,33,455	0/0:17,0:17:48.16:0,48,689	0/0:15,0:14:45.15:0,45,648	0/0:33,0:33:95.90:0,96,1330	0/0:14,0:14:42.08:0,42,543	0/0:21,0:19:57.17:0,57,787	0/0:26,0:26:78.25:0,78,1101	0/0:10,0:10:27.09:0,27,388	0/0:20,0:20:57.19:0,57,811	0/0:21,0:21:54.17:0,54,748	0/0:15,0:15:42.07:0,42,579	0/0:11,0:11:30.10:0,30,431	1/1:0,25:25:75.23:919,75,0	1/1:0,28:28:75.24:929,75,0	1/1:0,11:11:33.10:409,33,0
chr10	6250805	.	G	GT	2533.49	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=-4.906;DP=592;FS=2.660;HRun=8;HaplotypeScore=74.6294;InbreedingCoeff=0.8693;MQ=56.96;MQ0=4;MQRankSum=0.929;QD=22.22;ReadPosRankSum=2.021;VQSLOD=4.3825;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:89.41:0,89,804	0/0:10,0:10:27.01:0,27,247	0/1:14,0:7:19.37:19,0,94	0/0:12,0:10:18:0,18,164	0/0:30,0:30:84.03:0,84,763	0/0:20,0:20:57.01:0,57,516	0/0:13,0:12:36.02:0,36,329	0/0:43,0:43:99:0,105,951	0/0:14,0:15:33.01:0,33,302	0/0:25,0:26:57.02:0,57,518	0/0:20,0:20:54.03:0,54,494	1/1:2,18:22:51.15:589,51,0	1/1:1,14:15:36.11:416,36,0	1/1:3,14:17:33.10:380,33,0	0/0:15,2:17:7.38:0,7,317	0/0:13,0:13:24.01:0,24,220	0/0:21,0:20:54.03:0,54,494	0/0:17,0:16:48.03:0,48,439	0/0:34,0:29:68.99:0,69,621	0/0:29,0:29:81.04:0,81,741	0/0:23,0:22:59.96:0,60,538	0/0:16,0:16:45.02:0,45,412	1/1:6,28:34:84.24:962,84,0	1/1:1,10:11:30.09:346,30,0	0/0:12,0:12:30.01:0,30,274	0/0:23,0:23:63.01:0,63,571	0/0:32,3:35:93.05:0,93,851	0/0:16,0:16:47.98:0,48,431
chr10	6255834	.	CA	C	982.48	PASS	AB=1.000;AC=16;AF=0.286;AN=56;BaseQRankSum=2.501;DP=505;FS=0.000;HRun=9;HaplotypeScore=68.0212;InbreedingCoeff=0.7763;MQ=45.03;MQ0=102;MQRankSum=0.274;QD=6.64;ReadPosRankSum=0.998;VQSLOD=0.9893;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,13:19:30.01:274,30,0	1/1:5,3:5:9:82,9,0	0/1:30,0:12:10.88:11,0,70	0/1:21,0:5:19.62:20,0,29	1/1:8,3:5:9:82,9,0	0/0:18,0:15:39.12:0,39,448	0/0:12,0:9:21.06:0,21,242	0/0:33,0:8:21.06:0,21,242	0/0:16,0:14:36.11:0,36,415	1/1:7,10:13:26.99:241,27,0	1/1:8,11:10:18.01:165,18,0	0/0:8,0:6:15.04:0,15,173	0/0:15,0:11:27.08:0,27,311	0/0:8,0:6:9.03:0,9,104	0/0:17,0:16:42.01:0,42,439	0/0:14,0:13:21.06:0,21,240	0/0:21,0:17:33.10:0,33,381	1/1:2,5:5:12:110,12,0	0/0:19,1:16:14.72:0,15,422	0/0:27,0:14:39.10:0,39,437	1/1:3,8:7:21.01:192,21,0	0/0:22,0:15:39.12:0,39,450	0/0:21,0:15:33.10:0,33,381	0/0:13,0:9:12.04:0,12,138	0/0:19,0:12:24.07:0,24,277	0/0:30,1:16:11.64:0,12,377	0/0:18,0:15:38.91:0,39,414	0/0:22,0:17:51.15:0,51,588
chr10	6256661	.	TAGACAAGATGGATGA	T	484.33	PASS	AC=4;AF=0.080;AN=50;BaseQRankSum=4.481;DP=637;FS=0.000;HRun=0;HaplotypeScore=127.9866;InbreedingCoeff=0.6409;MQ=36.83;MQ0=108;MQRankSum=-3.107;QD=22.02;ReadPosRankSum=-0.588;VQSLOD=2.4696;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:34:33.11:0,33,2473	0/0:9,0:6:9.03:0,9,616	./.	./.	0/0:17,0:10:27.09:0,27,1846	0/0:21,0:20:33.11:0,33,2448	0/0:25,0:19:48.16:0,48,2823	0/0:25,0:1:3.01:0,3,217	0/0:28,0:27:51.15:0,51,3306	0/0:26,0:16:38.94:0,39,2569	0/0:23,0:15:30.10:0,30,1985	0/0:17,0:16:9.03:0,9,584	0/0:24,0:21:18.42:0,18,1329	0/0:20,0:16:2.79:0,3,224	0/0:23,0:22:27.09:0,27,1646	0/0:25,0:24:24.06:0,24,1610	0/0:42,0:37:54.19:0,54,3956	0/0:21,0:16:33.11:0,33,2078	1/1:8,10:8:21.04:554,21,0	./.	0/0:26,0:18:29.20:0,29,2004	1/1:3,1:2:3.01:36,3,0	0/0:16,0:6:6.02:0,6,436	0/0:25,0:21:12.04:0,12,894	0/0:19,0:11:24.08:0,24,1772	0/0:33,0:28:81.28:0,81,5439	0/0:24,0:22:42.14:0,42,2856	0/0:11,0:9:12.04:0,12,899
chr10	6257168	.	TA	T	2527.15	PASS	AB=0.736;AC=50;AF=0.926;AN=54;BaseQRankSum=-0.970;DP=220;FS=3.447;HRun=11;HaplotypeScore=30.4390;InbreedingCoeff=0.1462;MQ=63.44;MQ0=7;MQRankSum=-2.753;QD=11.92;ReadPosRankSum=1.006;VQSLOD=2.2532;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,21:21:53.94:443,54,0	1/1:0,0:1:2.04:6,2,0	0/1:5,1:4:16.43:16,0,26	0/0:8,0:1:0.47:0,0,1	1/1:2,0:16:24.43:70,24,0	1/1:1,11:12:26.97:222,27,0	1/1:0,5:6:17.02:129,17,0	1/1:3,6:6:17.02:129,17,0	1/1:1,6:7:14.97:123,15,0	1/1:3,0:9:10.17:29,10,0	1/1:1,0:15:28.52:82,29,0	1/1:0,0:4:8.15:23,8,0	1/1:1,0:11:14.26:41,14,0	1/1:0,0:7:12.22:35,12,0	1/1:1,4:5:11.98:99,12,0	1/1:0,5:5:14.98:123,15,0	1/1:1,6:7:17.98:148,18,0	1/1:0,0:6:10.19:29,10,0	1/1:2,8:8:23.97:197,24,0	1/1:2,11:13:32.96:271,33,0	1/1:1,0:9:14.26:41,14,0	0/1:3,5:8:17:84,0,17	1/1:1,0:10:14.26:41,14,0	1/1:0,0:4:8.15:24,8,0	1/1:1,4:5:11.98:99,12,0	./.	1/1:0,2:2:5.99:49,6,0	1/1:0,3:3:8.99:74,9,0
chr10	6263487	.	G	GA	9846.44	PASS	AB=0.571;AC=42;AF=0.750;AN=56;BaseQRankSum=-8.508;DP=592;FS=1.958;HRun=9;HaplotypeScore=51.8484;InbreedingCoeff=0.7622;MQ=57.59;MQ0=8;MQRankSum=2.614;QD=20.18;ReadPosRankSum=4.168;VQSLOD=5.2701;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,37:43:95.92:1021,96,0	1/1:3,10:11:27.07:294,27,0	0/0:13,0:5:14.88:0,15,113	0/0:6,0:1:3:0,3,26	1/1:9,28:36:49.16:766,49,0	1/1:2,11:13:18.05:199,18,0	0/1:6,18:23:30.02:383,0,30	0/0:24,0:24:62.97:0,63,544	1/1:0,18:16:30.08:332,30,0	1/1:5,23:28:20.09:665,20,0	1/1:4,22:26:54.15:597,54,0	1/1:6,10:15:9.02:100,9,0	1/1:6,14:18:30.08:331,30,0	1/1:2,24:25:45.10:487,45,0	1/1:3,21:23:27.96:518,28,0	1/1:1,19:18:51.14:564,51,0	1/1:1,22:24:66.01:711,66,0	0/1:7,20:27:11.86:425,0,12	1/1:7,6:10:23.90:244,24,0	1/1:0,25:26:65.94:680,66,0	1/1:2,9:11:21.06:232,21,0	1/1:10,16:21:30.08:332,30,0	1/1:4,14:17:24.06:266,24,0	1/1:1,16:17:36.10:398,36,0	1/1:3,13:15:27.07:299,27,0	0/0:30,1:31:50.79:0,51,670	0/0:19,0:19:53.97:0,54,464	0/0:11,0:11:32.99:0,33,285
chr10	6265197	.	AGG	A	1320.97	PASS	AB=1.000;AC=19;AF=0.352;AN=54;BaseQRankSum=-1.031;DP=399;FS=5.562;HRun=5;HaplotypeScore=58.8387;InbreedingCoeff=0.8973;MQ=66.62;MQ0=12;MQRankSum=0.012;QD=10.48;ReadPosRankSum=1.723;VQSLOD=-0.4926;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:65.63:0,66,545	0/0:3,0:3:9:0,9,80	0/0:25,0:11:21.35:0,21,155	0/1:29,0:6:8.36:8,0,23	0/0:15,0:15:32.66:0,33,314	1/1:9,0:9:17.90:140,18,0	1/1:16,0:15:29.57:235,30,0	0/0:18,0:18:47.74:0,48,390	1/1:10,0:10:23.96:196,24,0	0/0:18,0:18:45.53:0,46,426	0/0:5,0:5:15:0,15,132	0/0:19,0:19:42.73:0,43,372	0/0:5,0:5:11.95:0,12,123	0/0:15,0:15:38.77:0,39,370	1/1:7,0:7:13.72:110,14,0	1/1:11,0:11:22.58:190,23,0	1/1:15,0:15:24.01:243,24,0	0/0:14,0:14:25.07:0,25,261	1/1:6,0:5:12:105,12,0	./.	0/0:21,0:20:34.33:0,34,468	1/1:10,0:10:17.89:152,18,0	0/0:11,0:11:27.01:0,27,242	0/0:27,0:27:39.70:0,40,748	1/1:13,0:12:17.02:147,17,0	0/0:15,0:15:29.77:0,30,258	0/0:15,0:14:20.54:0,21,271	0/0:13,0:10:26.99:0,27,256
chr10	6265201	.	GGAGA	G	46.93	PASS	AC=2;AF=0.059;AN=34;BaseQRankSum=0.996;DP=425;FS=13.087;HRun=0;HaplotypeScore=80.3892;InbreedingCoeff=0.3762;MQ=63.29;MQ0=12;MQRankSum=0.478;QD=2.93;ReadPosRankSum=-0.177;VQSLOD=0.2419;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:20.89:0,21,327	./.	./.	./.	0/0:16,0:16:9.03:0,9,152	./.	./.	0/0:22,0:21:2.29:0,2,6	./.	0/0:18,0:18:9.02:0,9,104	./.	0/0:19,0:19:6.02:0,6,115	0/0:6,0:6:9.03:0,9,137	0/0:16,0:16:9.01:0,9,166	./.	./.	0/0:16,0:16:1.72:0,2,4	0/0:12,0:13:20.81:0,21,385	0/0:12,0:10:3.01:0,3,42	./.	0/0:23,0:22:15.91:0,16,208	./.	0/0:12,0:12:2.95:0,3,24	0/0:30,0:30:50.91:0,51,770	0/0:12,0:11:3.01:0,3,50	1/1:12,4:16:11.62:128,12,0	0/0:14,0:13:8.97:0,9,115	0/0:12,0:9:3.01:0,3,70
chr10	6265484	.	CT	C	4585.35	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=15.128;DP=615;FS=0.000;HRun=2;HaplotypeScore=75.6528;InbreedingCoeff=0.9998;MQ=68.04;MQ0=0;MQRankSum=-0.667;QD=35.27;ReadPosRankSum=0.500;VQSLOD=5.0635;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,108,1574	1/1:0,10:10:30.10:389,30,0	0/0:20,0:19:57.18:0,57,801	0/0:23,0:22:66.22:0,66,981	1/1:0,15:16:39.13:506,39,0	0/0:17,0:17:51.17:0,51,764	0/0:22,0:22:66.20:0,66,963	0/0:25,0:25:72.24:0,72,1078	0/0:24,0:24:69.18:0,69,1007	1/1:0,21:21:63.16:797,63,0	1/1:0,12:12:36.12:466,36,0	0/0:20,0:20:60.19:0,60,878	0/0:27,0:27:75.20:0,75,1094	0/0:24,0:24:72.23:0,72,1055	0/0:17,0:17:51.16:0,51,742	0/0:20,0:20:57.19:0,57,851	0/0:29,0:29:87.29:0,87,1296	1/1:1,30:31:84.20:1067,84,0	0/0:17,0:17:51.14:0,51,708	0/0:13,0:13:39.12:0,39,564	1/1:0,40:40:99:1362,105,0	0/0:14,0:14:39.09:0,39,559	0/0:24,0:24:66.18:0,66,961	0/0:25,0:25:69.22:0,69,1006	0/0:32,0:32:87.18:0,87,1215	0/0:17,0:17:51.16:0,51,746	0/0:24,0:24:72.24:0,72,1078	0/0:15,0:15:45.15:0,45,661
chr10	6265726	.	C	CT	17573.07	PASS	AB=1.000;AC=53;AF=0.946;AN=56;BaseQRankSum=-5.228;DP=613;FS=1.875;HRun=6;HaplotypeScore=65.6771;InbreedingCoeff=0.7463;MQ=70.04;MQ0=0;MQRankSum=-5.911;QD=29.73;ReadPosRankSum=3.724;VQSLOD=5.5717;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,44:47:99:1509,120,0	1/1:0,9:10:24.08:299,24,0	0/0:22,0:20:34.20:0,34,354	0/1:13,0:12:5.02:5,0,204	1/1:3,23:26:69.22:868,69,0	1/1:3,8:11:24.08:302,24,0	1/1:3,14:17:39.12:491,39,0	1/1:4,26:30:78.20:927,78,0	1/1:3,18:21:51.16:641,51,0	1/1:4,25:29:75.22:929,75,0	1/1:5,19:24:54.13:661,54,0	1/1:2,20:22:57.18:709,57,0	1/1:4,14:18:41.90:520,42,0	1/1:2,19:21:54.17:679,54,0	1/1:4,14:18:33.11:415,33,0	1/1:1,20:21:45.14:566,45,0	1/1:3,28:31:78.25:981,78,0	1/1:3,21:24:54.17:678,54,0	1/1:4,15:19:45.14:566,45,0	1/1:2,23:25:63.17:776,63,0	1/1:1,9:10:21.07:264,21,0	1/1:2,22:24:60.19:749,60,0	1/1:1,20:21:51.61:642,52,0	1/1:2,20:22:54.17:676,54,0	1/1:1,23:24:54.17:679,54,0	1/1:2,22:24:66.21:830,66,0	1/1:2,24:26:66.21:829,66,0	1/1:1,10:11:31.34:380,31,0
chr10	6267087	.	AATAGACC	A	11534	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=15.428;DP=589;FS=3.576;HRun=0;HaplotypeScore=140.9566;InbreedingCoeff=0.9993;MQ=67.54;MQ0=3;MQRankSum=-15.904;QD=57.96;ReadPosRankSum=2.470;VQSLOD=5.1194;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,105,4072	0/0:9,0:9:24.08:0,24,945	0/0:25,0:22:60.21:0,60,2003	0/0:32,0:29:75.18:0,75,2512	0/0:28,0:28:75.24:0,75,2703	1/1:1,23:24:57.20:1480,57,0	1/1:2,11:13:30.10:779,30,0	0/0:22,0:22:60.21:0,60,2355	1/1:1,22:23:54.19:1395,54,0	0/0:26,0:26:63.22:0,63,2432	0/0:14,0:14:39.12:0,39,1463	0/0:19,0:19:54.19:0,54,2124	0/0:15,0:15:42.14:0,42,1641	0/0:18,0:18:54.19:0,54,2142	1/1:2,17:19:48.16:1246,48,0	1/1:0,20:20:48.16:1190,48,0	1/1:4,18:22:39.13:967,39,0	0/0:21,0:21:63.18:0,63,2359	1/1:5,13:17:36.11:829,36,0	1/1:3,18:21:54.03:1158,54,0	0/0:9,0:9:24.08:0,24,887	1/1:0,14:14:36.12:934,36,0	0/0:17,0:17:51.18:0,51,2038	0/0:18,0:18:51.17:0,51,2013	1/1:1,24:25:60.21:1558,60,0	0/0:26,0:26:78.27:0,78,3065	0/0:37,0:37:99:0,105,3919	0/0:16,0:16:48.16:0,48,1886
chr10	6269302	.	AG	A	3406.67	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=15.594;DP=738;FS=14.549;HRun=2;HaplotypeScore=87.8460;InbreedingCoeff=0.9999;MQ=80.12;MQ0=0;MQRankSum=-3.472;QD=30.42;ReadPosRankSum=1.636;VQSLOD=2.0931;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,156,2273	0/0:12,0:12:33.10:0,33,472	0/0:27,0:26:75.25:0,75,1123	0/0:16,0:15:39.13:0,39,571	0/0:24,0:24:72.23:0,72,1057	0/0:21,0:21:63.21:0,63,944	0/0:25,0:25:75.20:0,75,1061	1/1:4,23:27:66.20:791,66,0	0/0:24,0:24:69.22:0,69,1014	0/0:43,0:43:99:0,123,1823	0/0:23,0:23:69.23:0,69,1034	0/0:28,0:28:84.28:0,84,1259	0/0:27,0:27:81.27:0,81,1214	0/0:23,0:23:69.22:0,69,1014	0/0:32,0:32:90.30:0,90,1349	0/0:22,0:22:66.22:0,66,989	0/0:26,0:25:78.26:0,78,1169	0/0:15,0:15:42.14:0,42,627	0/0:23,0:23:66.22:0,66,988	0/0:22,0:22:66.22:0,66,989	0/0:30,0:30:90.30:0,90,1349	0/0:22,0:22:66.22:0,66,989	0/0:24,0:24:71.05:0,71,1039	0/0:35,0:35:99:0,102,1507	0/0:27,0:27:81.27:0,81,1214	1/1:3,30:33:48.31:1033,48,0	1/1:2,35:37:93.29:1115,93,0	1/1:0,15:15:39.12:468,39,0
chr10	6270368	.	A	ACATATG	32867.11	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=-6.123;DP=709;FS=1.272;HRun=0;HaplotypeScore=144.6364;InbreedingCoeff=0.9956;MQ=79.98;MQ0=0;MQRankSum=-20.442;QD=83.42;ReadPosRankSum=1.145;VQSLOD=6.2833;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,25:36:72.25:2584,72,0	1/1:3,12:16:42.14:1508,42,0	0/0:23,0:23:63.13:0,63,1271	0/0:27,0:27:65.37:0,65,1459	1/1:5,18:26:48.16:1744,48,0	0/0:22,0:22:60.21:0,60,1471	0/0:27,0:27:78.25:0,78,1760	1/1:16,18:36:99:3571,105,0	0/0:26,0:26:78.27:0,78,1896	1/1:5,35:43:99:4308,123,0	1/1:5,16:21:51.18:1845,51,0	1/1:7,18:28:66.23:2330,66,0	1/1:4,16:20:57.20:2070,57,0	1/1:1,14:16:42.14:1531,42,0	0/0:24,0:24:72.25:0,72,1769	0/0:34,0:34:96.33:0,96,2329	0/0:19,0:19:57.17:0,57,1310	1/1:4,9:15:30.10:1070,30,0	0/0:22,0:22:66.22:0,66,1582	0/0:28,0:28:81.22:0,81,1765	1/1:8,17:29:48.16:1721,48,0	0/0:37,0:37:99:0,111,2720	1/1:4,17:24:47.99:1734,48,0	1/1:12,11:24:39.13:1409,39,0	0/0:26,0:26:75.26:0,75,1817	1/1:3,21:26:75.24:2633,75,0	1/1:3,19:26:66.23:2371,66,0	1/1:3,5:8:12.04:437,12,0
chr10	6270943	.	TCTC	T	6275.85	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-3.439;DP=475;FS=21.312;HRun=0;HaplotypeScore=87.7624;InbreedingCoeff=0.9918;MQ=87.64;MQ0=1;MQRankSum=-5.313;QD=36.07;ReadPosRankSum=1.361;VQSLOD=3.6440;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:96.30:0,96,2115	0/0:4,0:4:12.04:0,12,254	0/0:36,0:32:67.14:0,67,1279	0/0:26,0:24:66.13:0,66,1389	0/0:17,0:17:48.16:0,48,1101	1/1:0,16:16:39.01:570,39,0	1/1:2,17:19:45.02:673,45,0	0/0:23,0:23:66.21:0,66,1404	1/1:1,10:11:24.08:409,24,0	0/0:15,0:15:45.15:0,45,1036	0/0:17,0:17:45.15:0,45,1004	0/0:14,0:14:42.12:0,42,871	0/0:9,0:9:27.05:0,27,546	0/0:14,0:14:39.13:0,39,891	1/1:2,13:15:36.04:550,36,0	1/1:2,13:15:33.11:562,33,0	1/1:0,18:18:39.07:631,39,0	0/0:13,0:13:33.11:0,33,717	1/1:2,22:24:66.23:1113,66,0	1/1:2,10:12:21.03:302,21,0	0/0:17,0:17:51.08:0,51,1010	1/1:2,24:26:57.15:918,57,0	0/0:10,0:10:30.10:0,30,692	0/0:16,0:16:48.16:0,48,1105	1/1:0,18:18:36.01:549,36,0	0/0:15,0:15:45.15:0,45,1015	0/0:17,0:17:45.14:0,45,949	0/0:5,0:5:15.05:0,15,346
chr10	6271394	.	C	CA	4712.02	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=10.684;DP=733;FS=7.053;HRun=0;HaplotypeScore=113.6002;InbreedingCoeff=0.9996;MQ=93.12;MQ0=0;MQRankSum=-2.647;QD=45.75;ReadPosRankSum=-0.371;VQSLOD=3.4945;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,102,1422	0/0:12,0:12:36.12:0,36,502	0/0:41,0:42:86.25:0,86,1478	0/0:25,0:25:35.38:0,35,634	0/0:28,0:27:75.25:0,75,1047	0/0:27,0:27:81.27:0,81,1131	0/0:25,0:25:72.11:0,72,941	1/1:0,27:27:84.29:1336,84,0	0/0:20,0:20:60.20:0,60,839	0/0:28,0:28:84.28:0,84,1168	0/0:19,0:19:51.16:0,51,689	0/0:25,0:25:72.24:0,72,1005	0/0:28,0:28:84.28:0,84,1170	0/0:28,0:28:84.28:0,84,1173	0/0:24,0:24:69.23:0,69,961	0/0:28,0:28:78.25:0,78,1074	0/0:26,0:26:72.24:0,72,1002	0/0:20,0:20:57.17:0,57,775	0/0:21,0:21:63.21:0,63,878	0/0:29,0:29:78.26:0,78,1068	0/0:38,0:38:99:0,108,1509	0/0:24,0:24:72.24:0,72,1005	0/0:18,0:18:45.15:0,45,628	0/0:32,0:32:90.26:0,90,1231	0/0:28,0:28:81.27:0,81,1131	1/1:0,32:32:96.31:1509,96,0	1/1:1,33:34:90.31:1436,90,0	1/1:0,9:9:27.09:431,27,0
chr10	6271612	.	A	AG	7790.70	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=17.838;DP=535;FS=4.326;HRun=0;HaplotypeScore=126.8745;InbreedingCoeff=0.9955;MQ=77.34;MQ0=0;MQRankSum=-17.245;QD=29.96;ReadPosRankSum=1.820;VQSLOD=4.5158;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,14:16:33.09:384,33,0	1/1:1,14:15:42.12:485,42,0	0/0:14,0:14:39.13:0,39,534	0/0:20,0:20:54.13:0,54,692	1/1:4,22:28:78:827,78,0	0/0:25,0:24:72.24:0,72,1003	0/0:22,0:22:66.21:0,66,906	1/1:3,20:23:60.02:765,60,0	0/0:22,0:22:66.20:0,66,900	1/1:1,20:21:63.18:738,63,0	1/1:1,11:15:33.56:348,34,0	1/1:3,9:13:32.85:346,33,0	1/1:1,19:20:54.15:606,54,0	1/1:3,12:14:42.10:478,42,0	0/0:30,0:30:90.27:0,90,1212	0/0:20,0:20:54.18:0,54,755	0/0:23,0:23:69.22:0,69,948	1/1:1,9:10:30.09:356,30,0	0/0:21,0:21:60.18:0,60,808	0/0:20,0:20:57.18:0,57,781	1/1:1,6:7:18.05:199,18,0	0/0:26,0:26:78.26:0,78,1086	1/1:2,24:27:80.91:855,81,0	1/1:1,8:9:18.62:208,19,0	0/0:32,0:32:96.27:0,96,1289	1/1:3,15:18:47.77:534,48,0	1/1:3,13:16:42.12:486,42,0	1/1:0,5:5:15.05:177,15,0
chr10	6271613	.	A	AC	2970.45	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=18.596;DP=533;FS=5.041;HRun=1;HaplotypeScore=143.7993;InbreedingCoeff=0.9926;MQ=76.71;MQ0=0;MQRankSum=-17.730;QD=11.38;ReadPosRankSum=2.708;VQSLOD=2.2395;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,13:16:29.40:150,29,0	1/1:2,13:15:37.11:194,37,0	0/0:14,0:14:39.12:0,39,490	0/0:19,0:19:48.08:0,48,569	1/1:8,22:30:63.54:309,64,0	0/0:25,0:24:75.21:0,75,937	0/0:22,0:22:66.21:0,66,844	1/1:7,15:22:34.78:293,35,0	0/0:22,0:22:63.20:0,63,817	1/1:2,20:22:57.93:334,58,0	1/1:4,11:15:33.36:163,33,0	1/1:3,9:12:17.14:113,17,0	1/1:2,19:21:50.82:254,51,0	1/1:3,11:13:33.44:175,33,0	0/0:28,0:28:81.25:0,81,1037	0/0:20,0:20:57.15:0,57,698	0/0:23,0:23:69.21:0,69,882	1/1:1,9:10:26.20:156,26,0	0/0:23,0:23:57.17:0,57,715	0/0:20,0:20:57.18:0,57,727	1/1:1,6:7:16.90:82,17,0	0/0:26,0:26:78.25:0,78,1012	1/1:3,24:27:70.67:345,71,0	1/1:1,8:9:16.24:78,16,0	0/0:30,0:30:90.22:0,90,1132	1/1:6,14:19:36.27:247,36,0	1/1:2,13:15:40.39:222,40,0	1/1:0,5:5:14.62:87,15,0
chr10	6271615	.	A	ATC	12553.43	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=18.539;DP=573;FS=6.556;HRun=0;HaplotypeScore=142.7810;InbreedingCoeff=0.9984;MQ=73.70;MQ0=0;MQRankSum=-18.487;QD=41.84;ReadPosRankSum=0.592;VQSLOD=5.9409;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,13:21:47.90:768,48,0	1/1:2,13:15:39.13:637,39,0	0/0:14,0:14:27.14:0,27,576	0/0:18,0:18:51.17:0,51,798	1/1:8,24:32:69.75:1123,70,0	0/0:25,0:24:72.25:0,72,1172	0/0:22,0:22:66.23:0,66,1072	1/1:10,15:25:75.19:1222,75,0	0/0:23,0:23:69.22:0,69,1096	1/1:7,20:27:72.23:1191,72,0	1/1:5,14:19:51.17:798,51,0	1/1:4,10:14:36.12:576,36,0	1/1:3,19:22:63.17:1008,63,0	1/1:4,11:14:42.14:672,42,0	0/0:27,0:27:81.28:0,81,1317	0/0:19,0:19:57.18:0,57,898	0/0:23,0:23:69.24:0,69,1125	1/1:3,9:12:33.11:558,33,0	0/0:23,0:23:69.21:0,69,1055	0/0:23,0:23:60.19:0,60,955	1/1:5,6:11:21.07:339,21,0	0/0:26,0:26:78.27:0,78,1272	1/1:5,24:30:81.04:1270,81,0	1/1:5,8:13:24.04:345,24,0	0/0:30,0:30:90.30:0,90,1445	1/1:7,15:21:63.21:1058,63,0	1/1:0,14:14:42.14:690,42,0	1/1:2,5:7:21.04:299,21,0
chr10	6271695	.	AT	A	8338.11	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=18.416;DP=626;FS=2.641;HRun=8;HaplotypeScore=103.5650;InbreedingCoeff=0.9909;MQ=75.26;MQ0=1;MQRankSum=-1.497;QD=24.67;ReadPosRankSum=0.955;VQSLOD=4.8730;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,23:26:69.11:666,69,0	1/1:3,8:11:21.03:203,21,0	0/0:17,0:17:30:0,30,339	0/0:14,0:13:24.05:0,24,261	1/1:0,29:29:87.14:840,87,0	0/0:34,0:34:93.28:0,93,1113	0/0:25,0:25:72.22:0,72,870	1/1:6,35:41:99:998,105,0	0/0:27,0:27:78.24:0,78,942	1/1:3,21:24:63.08:602,63,0	1/1:3,18:21:51.08:493,51,0	1/1:2,19:21:56.12:549,56,0	1/1:2,17:19:48.07:463,48,0	1/1:0,25:25:75.12:724,75,0	0/0:31,0:31:90.28:0,90,1087	0/0:24,0:24:66.20:0,66,797	0/0:22,0:21:51.16:0,51,616	1/1:0,16:16:48.08:463,48,0	0/0:16,0:16:45.14:0,45,542	0/0:29,0:29:81.24:0,81,968	1/1:0,15:15:33.05:318,33,0	0/0:24,0:24:69.20:0,69,823	1/1:3,14:17:42.07:406,42,0	1/1:0,20:20:45.54:435,46,0	0/0:25,0:25:72.22:0,72,870	1/1:5,23:28:69.06:657,69,0	1/1:2,16:18:45.07:435,45,0	1/1:4,3:7:9.01:87,9,0
chr10	6271764	.	GGAGGGCA	G	10172.36	PASS	AC=30;AF=0.556;AN=54;BaseQRankSum=13.992;DP=597;FS=31.576;HRun=0;HaplotypeScore=182.9655;InbreedingCoeff=0.9691;MQ=78.68;MQ0=3;MQRankSum=-14.002;QD=35.32;ReadPosRankSum=-1.775;VQSLOD=2.4534;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,20:25:53.92:1266,54,0	1/1:3,4:7:12.04:272,12,0	0/0:39,0:38:62.78:0,63,1824	0/0:23,0:23:41.50:0,41,1175	1/1:6,14:20:11.52:279,12,0	0/0:23,0:23:54.16:0,54,1674	0/0:26,0:26:60.21:0,60,2136	1/1:13,20:33:57.15:1140,57,0	0/0:31,0:31:75.25:0,75,2606	1/1:9,16:25:57.20:1317,57,0	1/1:5,3:8:9.03:209,9,0	1/1:6,13:19:39.13:927,39,0	1/1:5,9:14:27.09:642,27,0	1/1:8,5:13:18.06:407,18,0	0/0:23,0:23:60.21:0,60,2188	0/0:25,0:25:54.19:0,54,2037	0/0:26,0:25:54.19:0,54,1993	1/1:9,7:16:21.07:499,21,0	0/0:18,0:18:33.10:0,33,1153	0/0:30,0:30:72.22:0,72,2219	1/1:14,5:19:11.96:222,12,0	0/0:29,0:29:78.26:0,78,2823	1/1:2,10:12:18.06:421,18,0	1/1:14,11:25:10.79:262,11,0	0/0:16,0:16:39.13:0,39,1391	1/1:11,20:30:60.21:1411,60,0	1/1:7,13:19:39.13:901,39,0	./.
chr10	6278412	.	C	CT	4914.64	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-4.341;DP=497;FS=7.010;HRun=2;HaplotypeScore=166.9063;InbreedingCoeff=0.9845;MQ=60.89;MQ0=4;MQRankSum=-0.617;QD=24.57;ReadPosRankSum=-0.565;VQSLOD=3.9445;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:20:60.17:0,60,727	0/0:8,0:8:24.08:0,24,297	0/0:18,0:11:27.08:0,27,334	0/0:11,0:10:26.47:0,26,265	0/0:22,0:22:56.21:0,56,674	1/1:4,17:21:60.15:778,60,0	1/1:2,11:13:26.91:392,27,0	0/0:28,0:27:78.25:0,78,972	1/1:4,12:16:45.11:588,45,0	0/0:18,0:18:51.16:0,51,631	0/0:9,0:9:27.08:0,27,334	0/0:8,0:8:24.08:0,24,298	0/0:14,0:14:42.13:0,42,516	0/0:16,0:16:48.15:0,48,588	1/1:3,9:12:36.08:450,36,0	1/1:1,17:18:45.12:622,45,0	1/1:4,1:33:6.73:60,7,0	0/0:13,0:13:39.08:0,39,464	1/1:5,14:17:48.11:611,48,0	1/1:1,25:26:68.90:857,69,0	0/0:10,0:10:24.08:0,24,298	1/1:5,0:15:32.99:345,33,0	0/0:16,0:16:44.17:0,44,526	0/0:20,0:20:54.64:0,55,665	1/1:3,0:27:26.88:210,27,0	0/0:27,0:27:78.24:0,78,956	0/0:17,0:17:51.14:0,51,609	0/0:21,0:21:63.18:0,63,764
chr10	6278439	.	C	CT	1296.09	PASS	AB=0.833;AC=9;AF=0.161;AN=56;BaseQRankSum=1.788;DP=456;FS=1.092;HRun=3;HaplotypeScore=176.0313;InbreedingCoeff=0.7558;MQ=42.47;MQ0=14;MQRankSum=-2.052;QD=16.41;ReadPosRankSum=-0.174;VQSLOD=2.9865;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:19:22.56:0,23,185	0/0:9,0:9:16.01:0,16,108	1/1:12,0:4:3.01:41,3,0	0/0:11,0:1:2.04:0,2,6	0/0:14,0:14:28.41:0,28,186	0/0:21,0:21:60.18:0,60,711	0/0:14,0:14:19.53:0,20,344	1/1:9,6:11:8.71:232,9,0	0/0:13,0:13:29.19:0,29,313	0/0:24,0:24:55.01:0,55,402	0/0:10,0:10:15.59:0,16,90	0/0:12,0:12:12.79:0,13,162	0/0:15,0:15:34.93:0,35,203	0/0:14,0:14:29.50:0,29,237	0/0:18,0:18:51.14:0,51,588	0/0:11,0:11:33.10:0,33,395	0/0:21,0:21:20.09:0,20,175	0/0:11,0:11:17.49:0,17,192	0/0:25,0:15:39.09:0,39,446	0/0:30,0:30:86.86:0,87,937	0/0:7,0:7:9.58:0,10,82	0/0:15,0:15:27.69:0,28,282	0/0:13,0:13:21.17:0,21,156	0/0:15,0:15:26.27:0,26,155	0/0:34,0:34:62.18:0,62,624	1/1:16,4:20:41.97:486,42,0	0/1:12,3:15:8.84:246,0,9	1/1:12,5:16:32.75:442,33,0
chr10	6278443	.	C	CT	2226.53	PASS	AB=0.742;AC=18;AF=0.321;AN=56;BaseQRankSum=3.825;DP=468;FS=2.008;HRun=3;HaplotypeScore=177.1293;InbreedingCoeff=-0.3657;MQ=43.38;MQ0=14;MQRankSum=-5.546;QD=9.16;ReadPosRankSum=2.886;VQSLOD=1.4919;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:3,14:16:62.95:346,0,63	0/1:5,5:10:77.65:136,0,78	1/1:15,0:5:2.81:14,3,0	0/0:16,0:3:1.77:0,2,5	0/1:3,10:13:12.45:184,0,12	0/0:21,0:21:60.18:0,60,712	0/0:13,0:14:0.34:0,0,355	0/1:14,0:11:8.40:8,0,50	0/0:15,0:15:38.22:0,38,412	0/1:14,10:24:99:341,0,254	0/1:6,3:9:65.27:65,0,103	0/1:7,4:11:99:134,0,115	0/1:8,7:15:99:264,0,117	0/1:9,6:15:99:191,0,132	0/0:20,0:20:57.16:0,57,657	0/0:14,0:14:36.10:0,36,419	0/0:22,0:22:6.87:0,7,158	0/1:7,4:11:99:100,0,120	0/0:24,0:14:39.11:0,39,459	0/0:31,0:31:89.87:0,90,974	0/1:2,4:6:54.61:91,0,55	0/0:15,0:15:27.68:0,28,271	0/1:5,8:13:85.34:223,0,85	0/1:7,8:15:40.99:200,0,41	0/0:32,0:32:62.18:0,62,625	0/1:19,1:20:25.78:52,0,26	0/1:17,0:17:10.79:11,0,127	0/1:16,0:16:17.76:23,0,18
chr10	6278447	.	C	CTT	926.71	PASS	AB=0.988;AC=18;AF=0.321;AN=56;BaseQRankSum=3.711;DP=474;FS=2.085;HRun=3;HaplotypeScore=193.4793;InbreedingCoeff=-0.3319;MQ=42.31;MQ0=14;MQRankSum=-2.728;QD=3.71;ReadPosRankSum=0.038;VQSLOD=-0.3716;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:17,1:17:99:157,0,100	0/1:9,0:9:52.43:52,0,149	1/1:18,0:4:1.51:3,2,0	0/1:23,0:3:4.53:5,0,5	0/0:12,2:14:12.62:0,13,99	0/0:20,0:20:57.61:0,58,740	0/0:15,0:15:18.77:0,19,476	0/1:11,0:7:55.13:55,0,109	0/0:15,0:15:24.33:0,24,511	0/1:25,0:25:52.21:52,0,396	0/1:10,0:10:6.69:7,0,177	0/1:10,1:11:67.08:67,0,189	0/1:15,1:16:93.59:94,0,198	0/1:15,0:15:8.30:8,0,229	0/0:20,0:20:59.96:0,60,725	0/0:14,0:14:39.57:0,40,488	0/0:20,0:20:23.67:0,24,259	0/1:11,0:11:69.68:70,0,152	0/0:23,0:14:39.05:0,39,487	0/0:33,0:33:93.87:0,94,1025	0/1:6,0:6:38.45:38,0,64	0/0:15,0:15:5.74:0,6,274	0/1:13,0:13:57.47:57,0,142	0/1:15,0:15:51.96:52,0,77	0/0:34,0:35:56.48:0,56,721	0/1:20,0:20:27.90:158,0,28	0/1:17,0:17:99:125,0,203	0/1:12,0:11:27.20:79,0,27
chr10	6278459	.	CCTTCTTT	C	3508.30	PASS	AB=0.976;AC=27;AF=0.482;AN=56;BaseQRankSum=8.362;DP=478;FS=2.658;HRun=0;HaplotypeScore=222.8150;InbreedingCoeff=-0.6443;MQ=46.31;MQ0=8;MQRankSum=-6.638;QD=8.68;ReadPosRankSum=-4.341;VQSLOD=2.0601;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:14,0:13:99:130,0,115	0/1:6,0:6:51.12:51,0,82	0/0:22,0:4:3.83:0,4,19	0/1:29,0:6:4.33:4,0,75	0/1:16,0:16:99:104,0,216	0/1:17,2:19:99:265,0,810	0/1:16,0:16:51.44:51,0,691	1/1:10,0:6:17.69:111,18,0	0/1:17,0:17:99:129,0,822	0/1:23,0:23:99:242,0,113	0/1:13,0:13:48.61:141,0,49	0/1:13,0:13:28.23:173,0,28	0/1:13,0:13:31.68:160,0,32	0/1:16,0:16:99:147,0,102	0/1:20,4:24:99:211,0,1418	0/1:14,0:14:99:116,0,630	0/1:19,0:19:26.11:26,0,643	0/1:12,0:12:44.90:141,0,45	0/1:16,1:16:81.45:81,0,557	0/1:25,10:35:99:677,0,1346	1/1:4,0:4:10.57:57,11,0	0/0:18,0:18:35.88:0,36,1135	0/1:12,0:12:67.04:67,0,159	0/1:16,0:16:55.49:55,0,120	0/0:33,0:33:37.75:0,38,1550	0/1:19,0:19:54.54:136,0,55	0/1:16,0:16:8.67:166,0,9	0/1:10,0:9:35.61:67,0,36
chr10	6278463	.	CTT	C	4053.17	PASS	AB=0.698;AC=19;AF=0.339;AN=56;BaseQRankSum=7.018;DP=499;FS=5.334;HRun=6;HaplotypeScore=185.0790;InbreedingCoeff=-0.2397;MQ=45.97;MQ0=8;MQRankSum=-9.917;QD=15.77;ReadPosRankSum=0.023;VQSLOD=0.0024;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:10,3:13:99:117,0,163	0/1:2,4:6:86.08:141,0,86	0/0:25,0:4:9.23:0,9,47	0/0:33,0:7:2.59:0,3,87	0/1:9,8:17:99:268,0,268	0/0:19,0:20:11.39:0,11,563	0/0:16,0:16:39.17:0,39,629	1/1:8,8:10:21.04:259,21,0	0/0:15,0:17:28.71:0,29,667	0/1:9,14:23:99:480,0,232	0/1:3,10:13:66.78:355,0,67	0/1:3,11:14:34.14:398,0,34	0/1:5,8:13:89.79:319,0,90	0/1:5,11:16:99:386,0,163	0/0:25,0:25:36.90:0,37,1005	0/0:13,0:15:25.91:0,26,595	0/0:18,0:19:8.93:0,9,519	0/1:8,4:12:74.87:263,0,75	0/0:19,0:18:25.47:0,25,517	0/1:35,0:35:43:43,0,894	1/1:2,2:4:9.02:106,9,0	0/0:19,0:19:45.10:0,45,772	0/1:8,4:12:99:131,0,218	0/1:9,7:16:99:161,0,165	0/0:34,0:34:56.23:0,56,1198	0/1:14,5:19:99:173,0,224	0/1:7,10:17:57.12:384,0,57	0/1:8,2:9:68.54:69,0,114
chr10	6278465	.	T	TTC	5208.31	PASS	AB=0.976;AC=22;AF=0.393;AN=56;BaseQRankSum=6.612;DP=514;FS=10.522;HRun=0;HaplotypeScore=187.0090;InbreedingCoeff=-0.4708;MQ=48.12;MQ0=9;MQRankSum=-8.053;QD=14.43;ReadPosRankSum=-1.472;VQSLOD=3.8928;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:15,1:15:99:190,0,163	0/1:6,0:6:73.56:139,0,74	0/1:27,0:5:3.97:4,0,39	0/0:34,0:8:19.21:0,19,150	0/1:20,1:21:99:301,0,235	0/1:16,0:16:78.37:78,0,459	0/0:16,0:16:14.66:0,15,487	1/1:17,1:12:26.27:309,26,0	0/0:16,0:16:13.48:0,13,501	0/1:23,0:23:99:568,0,213	0/1:14,0:14:50.74:406,0,51	0/1:16,0:16:23.39:421,0,23	0/1:11,0:12:76.15:319,0,76	0/1:18,0:18:99:496,0,129	0/1:25,0:25:99:146,0,797	0/0:15,0:15:21.62:0,22,492	0/0:19,0:19:8.88:0,9,442	0/1:9,3:12:67.31:238,0,67	0/1:20,0:19:57.66:58,0,417	0/1:35,0:35:99:372,0,733	0/1:4,0:4:5.31:71,0,5	0/0:19,0:19:47.77:0,48,612	0/1:13,0:13:99:216,0,191	0/1:15,1:16:99:159,0,167	0/0:34,0:34:52.41:0,52,1028	0/1:19,0:19:99:150,0,388	0/1:19,1:20:99:490,0,115	0/1:10,0:9:75.40:75,0,187
chr10	6278470	.	CTT	C	222.51	PASS	AB=0.899;AC=10;AF=0.179;AN=56;BaseQRankSum=8.649;DP=519;FS=6.288;HRun=6;HaplotypeScore=198.0656;InbreedingCoeff=-0.1379;MQ=50.03;MQ0=9;MQRankSum=-9.284;QD=1.49;ReadPosRankSum=3.652;VQSLOD=-0.5191;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:15:5.94:0,6,234	0/1:7,0:7:11.73:12,0,114	0/0:30,0:6:9.43:0,9,66	0/0:40,0:11:5.48:0,5,211	0/0:23,0:23:19.63:0,20,419	0/1:14,2:16:41.67:42,0,631	0/0:14,1:15:32.85:0,33,673	0/0:19,0:13:4.58:0,5,113	0/1:14,2:16:22.60:23,0,616	0/0:23,0:23:21.69:0,22,382	0/1:15,0:15:3.04:3,0,163	0/0:15,0:15:5.12:0,5,139	0/0:13,0:13:4.54:0,5,194	0/0:18,0:18:1.33:0,1,283	0/1:22,4:26:41.75:42,0,1021	0/1:15,2:17:15.28:15,0,711	0/0:19,0:19:5.44:0,5,622	0/0:12,0:12:9.43:0,9,130	0/1:15,2:16:9.07:9,0,546	0/1:20,10:31:99:199,0,999	1/1:4,0:4:2.28:5,2,0	0/0:19,0:19:48.16:0,48,866	0/0:13,0:13:17.48:0,17,347	0/0:15,0:15:0.91:0,1,178	0/0:34,0:34:87.06:0,87,1445	0/0:17,0:17:30.49:0,30,436	0/0:19,0:19:23.43:0,23,340	0/0:10,0:9:19.95:0,20,222
chr10	6278496	.	T	TCTTC	14655.19	PASS	AB=1.000;AC=31;AF=0.574;AN=54;BaseQRankSum=2.563;DP=572;FS=4.923;HRun=0;HaplotypeScore=158.7779;InbreedingCoeff=0.9282;MQ=54.78;MQ0=3;MQRankSum=-10.512;QD=46.38;ReadPosRankSum=0.254;VQSLOD=5.4891;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,13:21:33.01:756,33,0	1/1:0,11:11:24.08:599,24,0	0/0:32,0:14:29.94:0,30,356	0/1:39,0:20:8.32:8,0,371	1/1:2,23:29:63.16:1501,63,0	0/0:19,0:19:49.69:0,50,750	0/0:19,0:19:41.02:0,41,711	1/1:5,16:24:57.03:1049,57,0	0/0:21,0:21:51.17:0,51,834	1/1:2,24:31:78.24:1795,78,0	1/1:0,16:16:45.07:1002,45,0	1/1:3,13:17:45.15:1098,45,0	1/1:1,17:20:42.14:1044,42,0	1/1:1,19:21:57.20:1403,57,0	0/0:25,0:25:69.24:0,69,1154	0/0:21,0:21:54.18:0,54,911	0/0:22,0:22:47.97:0,48,738	1/1:2,8:10:24.04:546,24,0	0/0:13,0:15:28.32:0,28,413	0/0:28,0:28:63.19:0,63,1011	./.	0/0:14,0:14:30.10:0,30,481	1/1:0,16:19:42.14:1019,42,0	1/1:1,9:12:21.07:519,21,0	0/0:38,0:38:90.28:0,90,1452	1/1:2,12:16:40.88:807,41,0	1/1:3,18:23:51.14:1214,51,0	1/1:3,3:6:12.04:294,12,0
chr10	6279127	.	AGG	A	5054.10	PASS	AB=0.770;AC=50;AF=0.893;AN=56;BaseQRankSum=-0.918;DP=632;FS=2.071;HRun=6;HaplotypeScore=128.6204;InbreedingCoeff=0.4024;MQ=69.30;MQ0=36;MQRankSum=-3.985;QD=8.88;ReadPosRankSum=6.107;VQSLOD=0.6629;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:31,0:30:53.45:411,53,0	1/1:3,1:4:6.89:67,7,0	0/0:26,0:17:17.39:0,17,411	0/0:36,0:25:50.77:0,51,486	1/1:13,0:13:4.80:148,5,0	1/1:23,0:22:20.92:162,21,0	1/1:17,0:16:23.85:182,24,0	1/1:28,0:25:65.98:580,66,0	1/1:22,0:21:20.92:161,21,0	1/1:5,12:15:29.88:288,30,0	0/1:3,17:20:13.12:34,0,13	1/1:24,0:22:47.58:378,48,0	1/1:18,0:17:4.64:45,5,0	1/1:25,0:24:3.75:41,4,0	1/1:25,0:25:55.81:435,56,0	1/1:24,0:23:11.93:92,12,0	1/1:27,0:27:10.94:60,11,0	0/1:23,0:17:36.13:146,0,36	1/1:25,0:20:50.83:409,51,0	1/1:20,0:20:40.87:313,41,0	1/1:34,0:32:10.69:368,11,0	1/1:26,0:26:8.96:68,9,0	1/1:27,0:24:2.33:24,2,0	1/1:30,0:30:8.98:72,9,0	1/1:23,0:23:26.89:206,27,0	1/1:10,0:10:29.80:221,30,0	1/1:15,0:13:2.69:24,3,0	1/1:18,0:14:14.95:117,15,0
chr10	6279130	.	GGGGTGTGTGTGTGTGTGTGT	G	10145.79	PASS	AB=0.935;AC=28;AF=0.500;AN=56;BaseQRankSum=-3.670;DP=646;FS=20.505;HRun=0;HaplotypeScore=240.8814;InbreedingCoeff=0.2213;MQ=64.04;MQ0=42;MQRankSum=-2.535;QD=23.54;ReadPosRankSum=1.022;VQSLOD=1.9591;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:35,0:34:99:154,0,696	0/1:5,0:5:17.33:17,0,442	0/0:25,0:15:17.74:0,18,567	0/0:32,0:21:50.98:0,51,859	0/1:13,0:13:92.26:92,0,909	1/1:2,19:20:21.07:1122,21,0	1/1:16,0:15:23.85:182,24,0	0/1:30,0:27:99:398,0,434	1/1:1,18:19:21.07:1161,21,0	0/1:18,0:16:99:150,0,1052	0/0:20,0:20:6.02:0,6,469	0/1:26,0:24:99:207,0,928	0/0:2,0:17:10.28:0,10,386	0/0:4,0:25:11.22:0,11,318	1/1:15,9:25:56.03:1872,56,0	1/1:4,23:26:10.33:651,10,0	0/1:3,23:26:5.50:396,0,5	0/1:25,0:19:76.34:76,0,2623	1/1:25,0:19:43.53:399,44,0	1/1:14,4:19:40.99:1026,41,0	0/1:38,0:36:99:199,0,3736	1/1:3,22:25:9.03:505,9,0	0/0:5,0:25:4.82:0,5,133	0/0:3,0:30:9.03:0,9,392	1/1:2,20:23:27.09:1498,27,0	0/1:9,0:10:40.40:40,0,636	0/0:3,0:16:7.64:0,8,211	0/0:7,0:13:14.72:0,15,399
chr10	6279950	.	AT	A	12366	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-3.365;DP=578;FS=1.006;HRun=9;HaplotypeScore=60.5662;InbreedingCoeff=0.9155;MQ=74.18;MQ0=0;MQRankSum=-6.369;QD=22.36;ReadPosRankSum=4.079;VQSLOD=5.5395;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,34:39:96:870,96,0	1/1:2,15:17:39.02:357,39,0	0/0:17,0:17:31.92:0,32,298	0/0:8,0:8:4.11:0,4,57	1/1:4,30:34:90.01:816,90,0	1/1:0,15:15:45.02:412,45,0	1/1:4,17:21:42.02:384,42,0	1/1:5,28:33:84.02:762,84,0	1/1:2,18:20:51.02:467,51,0	1/1:3,26:29:75.02:681,75,0	1/1:3,23:26:63.02:576,63,0	1/1:5,23:28:57.01:521,57,0	1/1:1,15:16:39.02:357,39,0	1/1:2,17:19:39.01:357,39,0	1/1:1,25:26:66.03:604,66,0	1/1:2,15:17:42.02:384,42,0	1/1:2,15:17:36.02:329,36,0	1/1:1,19:20:48.02:439,48,0	1/1:3,14:17:41.97:376,42,0	1/1:2,13:15:39.02:357,39,0	1/1:0,21:21:54.03:494,54,0	1/1:2,12:14:36.02:329,36,0	1/1:5,22:27:63.03:576,63,0	1/1:0,22:22:66.04:604,66,0	1/1:0,8:8:21.01:192,21,0	1/1:3,23:26:69.02:626,69,0	1/1:2,11:13:30.01:275,30,0	1/1:4,9:13:24.01:220,24,0
chr10	6280120	.	TGCTCAAAGGTACAAG	T	16491.64	PASS	AB=0.941;AC=25;AF=0.446;AN=56;BaseQRankSum=14.333;DP=432;FS=95.797;HRun=0;HaplotypeScore=191.0356;InbreedingCoeff=0.9118;MQ=86.88;MQ0=0;MQRankSum=-12.310;QD=76.35;ReadPosRankSum=1.618;VQSLOD=1.0500;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,23:31:60.21:2559,60,0	1/1:1,10:11:27.09:1195,27,0	0/0:23,0:23:69.24:0,69,3949	0/0:17,0:17:48.16:0,48,2785	1/1:2,16:18:42.14:1590,42,0	0/0:6,0:6:18.06:0,18,1088	0/0:18,0:18:48.16:0,48,3162	0/0:18,0:18:45.11:0,45,2824	0/0:17,0:17:45.15:0,45,3228	1/1:6,10:16:30.10:1156,30,0	1/1:1,7:8:21.07:757,21,0	1/1:5,15:20:42.14:1836,42,0	1/1:2,19:21:51.18:2246,51,0	1/1:2,18:20:57.20:2495,57,0	0/0:15,0:15:42.14:0,42,2758	0/0:11,0:11:30.10:0,30,2025	0/0:20,0:20:60.21:0,60,3992	1/1:4,7:11:9.03:311,9,0	0/0:13,0:13:36.12:0,36,2497	0/0:9,0:9:24.08:0,24,1782	1/1:12,10:22:21.07:747,21,0	0/0:12,0:12:36.12:0,36,2481	1/1:1,9:10:27.09:1029,27,0	1/1:5,7:12:12.04:483,12,0	0/0:14,0:14:42.14:0,42,2993	0/1:15,1:16:87.69:88,0,3069	0/0:16,0:15:48.16:0,48,3275	0/0:7,0:7:21.07:0,21,1526
chr10	6281216	.	GA	G	2614.74	PASS	AB=0.958;AC=35;AF=0.761;AN=46;BaseQRankSum=-4.129;DP=145;FS=11.396;HRun=1;HaplotypeScore=25.8549;InbreedingCoeff=0.3734;MQ=108.38;MQ0=0;MQRankSum=-3.766;QD=23.56;ReadPosRankSum=3.823;VQSLOD=2.1695;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,0:2:2.84:14,3,0	./.	0/0:17,0:16:21.88:0,22,428	0/0:14,0:14:29.92:0,30,328	1/1:3,0:3:6:52,6,0	1/1:1,1:2:5.97:61,6,0	1/1:1,14:15:39.13:542,39,0	0/1:6,1:7:10.44:79,0,10	1/1:0,9:9:24.08:329,24,0	0/1:4,0:4:3.77:24,0,4	1/1:2,0:2:2.99:23,3,0	1/1:2,0:2:2.80:13,3,0	./.	0/0:2,0:2:1.55:0,2,4	1/1:2,3:5:13.27:143,13,0	1/1:0,7:7:18.06:251,18,0	1/1:0,14:14:30.10:417,30,0	./.	1/1:0,4:4:12.02:149,12,0	1/1:0,5:5:12:144,12,0	1/1:3,1:4:3.74:12,4,0	1/1:0,8:8:12.04:167,12,0	./.	./.	1/1:0,11:11:18.06:251,18,0	0/1:4,0:4:2.26:44,0,2	1/1:3,0:3:0.85:29,1,0	0/0:1,0:1:0.47:0,0,1
chr10	6282001	.	ATGTC	A	937.08	PASS	AB=0.964;AC=13;AF=0.232;AN=56;BaseQRankSum=6.894;DP=602;FS=14.901;HRun=0;HaplotypeScore=141.5191;InbreedingCoeff=-0.3063;MQ=59.12;MQ0=13;MQRankSum=-0.437;QD=3.38;ReadPosRankSum=7.726;VQSLOD=0.7005;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:24.87:0,25,330	0/0:5,0:5:6.47:0,6,94	0/0:40,0:24:68.95:0,69,904	0/0:38,0:23:43.75:0,44,828	0/0:27,0:27:56.95:0,57,1009	0/1:18,0:18:19.66:181,0,20	0/1:10,14:23:2.02:2,0,84	0/1:24,0:22:14.94:15,0,362	0/0:33,0:33:1.35:0,1,141	0/0:26,0:26:69.11:0,69,1201	0/0:19,0:19:48.09:0,48,841	0/0:15,0:15:33.91:0,34,519	0/0:11,0:11:32.44:0,32,570	0/0:14,0:14:33.08:0,33,604	0/1:26,0:26:29.02:29,0,183	0/1:21,0:21:49.29:49,0,75	0/1:19,0:17:48.25:48,0,68	0/0:19,0:19:54.07:0,54,960	0/1:13,0:12:88.52:89,0,137	0/1:18,0:17:54.40:54,0,133	0/0:22,0:22:49.22:0,49,678	0/1:28,0:29:99:179,0,139	0/0:16,0:16:39.08:0,39,771	0/0:24,0:24:27:0,27,514	0/1:27,0:27:99:124,0,206	0/1:31,0:30:99:144,0,241	0/1:14,0:14:30.41:138,0,30	0/1:12,0:13:33.16:33,0,133
chr10	6282003	.	GTCTCTCTCTC	G	2522.39	PASS	AB=0.692;AC=5;AF=0.089;AN=56;BaseQRankSum=-0.221;DP=586;FS=14.526;HRun=0;HaplotypeScore=181.9262;InbreedingCoeff=0.3508;MQ=58.56;MQ0=15;MQRankSum=-1.478;QD=33.19;ReadPosRankSum=-0.177;VQSLOD=2.3509;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:17.70:0,18,446	0/0:5,0:5:3.90:0,4,127	0/0:38,0:22:30.02:0,30,997	0/0:36,0:22:9.61:0,10,1054	0/0:27,0:27:48.14:0,48,1625	0/0:17,0:17:33.05:0,33,347	0/0:24,0:23:5.92:0,6,43	0/1:12,11:21:70.82:663,0,71	0/0:33,0:33:18.95:0,19,364	0/0:28,0:27:60.21:0,60,2344	0/0:19,0:19:36.12:0,36,1334	0/0:14,0:14:22.63:0,23,791	0/0:11,0:11:30.10:0,30,1054	0/0:14,0:14:31.05:0,31,1110	0/0:26,0:26:21.03:0,21,290	0/0:20,0:20:11.90:0,12,128	0/0:18,0:16:17.06:0,17,203	0/0:18,0:18:48.13:0,48,1758	0/0:13,0:12:27.07:0,27,522	0/0:18,0:16:17.85:0,18,233	0/0:21,0:21:31.92:0,32,1044	0/0:28,0:28:46.79:0,47,603	0/0:16,0:16:36.11:0,36,1363	0/0:24,0:24:24.08:0,24,953	0/0:26,0:26:41.29:0,41,728	0/1:11,16:27:87.77:1237,0,88	0/1:10,2:14:2.26:523,0,2	1/1:6,4:11:9.03:216,9,0
chr10	6282021	.	C	CTGTGTGTGTGTG	1290.36	PASS	AB=1.000;AC=12;AF=0.214;AN=56;BaseQRankSum=2.117;DP=536;FS=0.641;HRun=0;HaplotypeScore=186.0090;InbreedingCoeff=0.1355;MQ=49.39;MQ0=17;MQRankSum=-1.204;QD=6.83;ReadPosRankSum=-4.059;VQSLOD=1.3494;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:11:9.04:0,9,243	0/0:6,0:6:1.75:0,2,81	0/0:23,0:8:24.02:0,24,428	0/0:24,0:10:24.54:0,25,484	0/0:22,0:22:35.71:0,36,848	1/1:19,0:18:21.58:549,22,0	0/0:24,0:21:1.04:0,1,3	0/1:23,0:21:99:103,0,310	0/0:10,20:31:2.94:0,3,34	0/0:24,0:23:63.20:0,63,1406	0/0:16,0:16:33.07:0,33,652	0/1:10,0:10:99:147,0,427	0/0:13,0:13:3.90:0,4,458	0/0:15,0:15:26.65:0,27,664	0/0:24,0:24:3.74:0,4,9	0/0:11,11:23:8.59:0,9,34	1/1:16,0:14:6.03:145,6,0	0/0:16,0:16:44.31:0,44,951	0/1:15,0:14:41.41:41,0,59	0/0:11,7:16:3.17:0,3,7	0/0:19,0:19:23.80:0,24,565	0/1:26,0:26:6.18:143,0,6	0/0:19,0:19:29.67:0,30,832	0/1:23,0:23:24.91:25,0,467	0/1:22,0:21:33.35:59,0,33	0/1:28,0:26:99:201,0,147	0/0:16,0:16:28.76:0,29,242	0/1:7,0:7:0.20:28,0,0
chr10	6282023	.	C	CTGTGTGTG	645.21	PASS	AB=1.000;AC=18;AF=0.321;AN=56;BaseQRankSum=4.005;DP=532;FS=8.764;HRun=0;HaplotypeScore=161.5801;InbreedingCoeff=-0.0402;MQ=49.15;MQ0=15;MQRankSum=-2.828;QD=2.17;ReadPosRankSum=-4.292;VQSLOD=0.4161;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:12:11.25:0,11,151	0/0:6,0:6:1.78:0,2,46	0/0:19,0:8:20.97:0,21,234	0/0:22,0:10:24.41:0,24,283	0/0:22,0:22:14.84:0,15,435	1/1:19,0:18:12.05:338,12,0	0/0:24,0:21:0.15:0,0,1	0/1:23,0:21:4.93:5,0,157	0/1:29,0:28:9.94:21,0,10	0/0:25,0:24:64.80:0,65,817	0/0:15,0:15:23.99:0,24,336	0/1:10,0:10:45.05:45,0,240	0/1:13,0:13:78.02:78,0,186	0/0:15,0:15:23.08:0,23,349	0/0:7,15:23:3.74:0,4,9	0/1:23,0:22:15.76:18,0,16	0/1:16,0:14:6.32:6,0,14	0/0:16,0:16:8.50:0,9,468	0/1:19,0:17:57.96:58,0,66	1/1:18,0:16:0.56:21,1,0	0/0:17,0:17:0.52:0,1,274	0/1:25,0:25:1.62:52,0,2	0/0:18,0:18:29.65:0,30,418	0/1:25,0:25:25.56:26,0,205	0/1:21,0:20:7.92:18,0,8	0/1:31,0:29:69.97:70,0,74	0/1:18,0:18:12.27:12,0,75	1/1:7,0:7:4.02:31,4,0
chr10	6282583	.	C	CTT	2224.84	PASS	AB=0.882;AC=28;AF=0.500;AN=56;BaseQRankSum=5.768;DP=478;FS=5.221;HRun=16;HaplotypeScore=119.2572;InbreedingCoeff=0.5487;MQ=51.28;MQ0=10;MQRankSum=-4.538;QD=7.06;ReadPosRankSum=-4.871;VQSLOD=-0.5800;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:33,11:47:46.87:519,47,0	0/1:2,1:3:13.49:46,0,13	0/0:5,0:3:2.93:0,3,21	0/1:9,0:6:0:0,0,0	1/1:19,7:32:31.60:263,32,0	0/0:11,0:12:5.08:0,5,33	0/1:18,0:20:7.55:8,0,68	0/0:16,0:24:20.82:0,21,96	0/1:11,0:11:11.41:11,0,36	1/1:17,1:21:2.36:95,2,0	1/1:5,3:11:26.22:213,26,0	1/1:10,2:13:29.64:212,30,0	1/1:16,1:16:20.23:169,20,0	1/1:16,2:19:26.91:236,27,0	0/0:16,0:16:7.96:0,8,66	0/0:12,0:12:21.37:0,21,164	0/0:21,0:20:16.75:0,17,133	1/1:9,5:16:18.07:229,18,0	0/0:15,0:15:19.54:0,20,120	0/1:14,0:20:1.52:2,0,83	1/1:4,0:5:3.47:29,3,0	0/1:15,0:17:2.90:3,0,77	1/1:18,3:22:23.19:194,23,0	1/1:17,6:22:21.81:187,22,0	0/0:15,0:17:15.36:0,15,116	0/0:6,0:14:2.36:0,2,70	0/0:8,0:13:9.77:0,10,44	0/0:4,0:10:16.49:0,16,80
chr10	6282604	.	C	CT	2711.80	PASS	AC=24;AF=0.462;AN=52;BaseQRankSum=2.485;DP=478;FS=4.199;HRun=6;HaplotypeScore=63.0518;InbreedingCoeff=0.9540;MQ=38.76;MQ0=26;MQRankSum=-5.102;QD=12.50;ReadPosRankSum=1.722;VQSLOD=2.2600;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:21,24:40:48.26:545,48,0	1/1:3,2:4:9.03:113,9,0	./.	./.	1/1:15,13:28:21.91:248,22,0	0/0:15,0:12:21.05:0,21,214	0/0:24,0:22:39.01:0,39,397	0/0:17,0:17:21:0,21,203	0/0:19,0:19:39.04:0,39,397	1/1:9,12:21:34.35:411,34,0	1/1:7,5:11:15.45:158,15,0	1/1:5,8:12:22.42:267,22,0	1/1:6,9:14:18.06:223,18,0	1/1:7,7:13:23.04:235,23,0	0/0:20,0:20:42.06:0,42,412	0/0:16,0:16:23.94:0,24,245	0/0:23,0:21:33.05:0,33,329	1/1:10,6:14:17.27:195,17,0	0/0:14,0:14:27.05:0,27,275	0/0:13,0:13:12.02:0,12,120	1/1:5,3:7:6.02:75,6,0	0/0:26,0:22:23.71:0,24,243	1/1:7,14:21:28.33:342,28,0	1/1:15,4:12:9.03:113,9,0	0/0:11,0:11:27.05:0,27,267	0/0:21,0:20:54.01:0,54,534	0/0:24,0:23:54.06:0,54,538	0/0:13,0:12:26.99:0,27,275
chr10	6283118	.	T	TAA	6003.31	PASS	AB=0.735;AC=31;AF=0.554;AN=56;BaseQRankSum=5.942;DP=569;FS=3.313;HRun=13;HaplotypeScore=86.7949;InbreedingCoeff=0.7417;MQ=71.13;MQ0=2;MQRankSum=-0.222;QD=16.68;ReadPosRankSum=0.401;VQSLOD=4.2449;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:33,0:33:83.88:693,84,0	1/1:3,4:11:19.48:164,19,0	0/1:18,0:16:14.18:14,0,95	0/0:15,0:15:8.39:0,8,56	1/1:6,10:23:2.14:467,2,0	0/0:23,0:25:38.34:0,38,417	0/0:18,0:18:35.82:0,36,305	1/1:10,1:23:3.05:135,3,0	0/0:17,0:18:32.49:0,32,271	1/1:4,12:19:44.58:515,45,0	0/1:11,12:26:2.85:443,0,3	1/1:25,0:25:53.91:447,54,0	1/1:19,0:19:53.90:435,54,0	1/1:21,1:22:48.14:431,48,0	0/0:14,0:14:23.88:0,24,207	0/0:14,0:14:29.86:0,30,264	0/0:23,0:24:47.49:0,47,403	1/1:3,20:24:54.13:701,54,0	0/0:18,0:22:14.20:0,14,250	0/0:23,0:24:53.59:0,54,456	1/1:1,14:16:24.08:326,24,0	0/0:17,0:19:18.57:0,19,314	1/1:22,0:22:45.41:371,45,0	1/1:24,0:24:65.89:535,66,0	0/0:13,0:14:29.62:0,30,249	1/1:5,1:22:12.51:140,13,0	1/1:5,1:24:15.76:138,16,0	0/1:2,1:8:15.43:47,0,15
chr10	6283126	.	A	AAC	6312.07	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=-6.564;DP=576;FS=1.493;HRun=0;HaplotypeScore=80.4584;InbreedingCoeff=0.5889;MQ=69.70;MQ0=2;MQRankSum=-1.532;QD=23.38;ReadPosRankSum=8.429;VQSLOD=4.7166;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,37:38:84.28:1343,84,0	0/1:8,0:8:24.41:26,0,24	0/0:19,0:17:30.10:0,30,440	0/0:12,0:11:23.91:0,24,249	0/1:25,0:25:81.50:82,0,186	0/0:24,0:24:71.85:0,72,868	0/0:22,0:22:60.08:0,60,710	0/0:22,0:22:36.72:0,37,382	0/0:19,0:19:54.10:0,54,637	0/1:18,0:18:44.42:76,0,44	0/1:29,0:29:88.03:88,0,283	1/1:1,22:24:57.19:918,57,0	1/1:0,18:18:54.18:877,54,0	1/1:1,22:24:53.85:828,54,0	0/0:13,0:13:39.04:0,39,465	0/0:14,0:14:39.11:0,39,508	0/0:24,0:24:69.12:0,69,842	1/1:23,0:23:19.06:188,19,0	0/0:20,0:20:59.63:0,60,655	0/0:26,0:26:78.18:0,78,962	0/1:17,0:17:23.68:84,0,24	0/0:18,0:18:51.95:0,52,639	1/1:0,19:19:44.30:730,44,0	1/1:0,25:26:66.23:1072,66,0	0/0:13,0:13:36.09:0,36,465	0/0:23,0:23:49:0,49,379	0/0:27,0:27:49.71:0,50,363	0/0:10,0:10:6.72:0,7,132
chr10	6284582	.	C	CACACAA	3603.80	PASS	AB=0.935;AC=33;AF=0.589;AN=56;BaseQRankSum=3.750;DP=593;FS=7.582;HRun=0;HaplotypeScore=117.5293;InbreedingCoeff=0.4153;MQ=52.51;MQ0=23;MQRankSum=-1.675;QD=8.96;ReadPosRankSum=0.812;VQSLOD=2.0421;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:5,26:32:3.54:52,4,0	1/1:15,0:15:26.84:330,27,0	0/0:43,0:12:17.94:0,18,158	0/0:42,0:10:24.02:0,24,236	1/1:2,9:11:17.85:204,18,0	0/1:19,0:19:12.57:13,0,123	0/0:26,0:26:31.27:0,31,270	1/1:32,0:31:5.16:464,5,0	0/1:13,0:13:58.23:70,0,58	1/1:4,14:22:39.51:653,40,0	1/1:6,14:20:22.66:221,23,0	1/1:1,20:22:9.03:261,9,0	1/1:6,13:21:6.56:152,7,0	0/1:3,15:19:15.74:243,0,16	0/0:16,0:16:17.20:0,17,210	0/1:17,0:17:47.44:47,0,175	0/0:25,0:24:13.59:0,14,216	1/1:13,0:13:11.56:126,12,0	0/0:14,0:13:19.56:0,20,158	0/0:11,0:11:23.42:0,23,188	1/1:8,18:24:3.67:61,4,0	0/1:13,0:13:11.12:11,0,97	1/1:3,7:11:5.91:74,6,0	1/1:7,25:34:8.88:180,9,0	0/0:14,0:14:7.63:0,8,108	0/1:25,0:25:10.67:373,0,11	1/1:24,0:23:20.01:67,20,0	0/1:12,0:12:2.07:2,0,4
chr10	6284584	.	C	CACAA	2987.92	PASS	AB=0.942;AC=32;AF=0.571;AN=56;BaseQRankSum=4.426;DP=580;FS=13.573;HRun=0;HaplotypeScore=105.5154;InbreedingCoeff=0.1472;MQ=51.83;MQ0=25;MQRankSum=0.108;QD=6.95;ReadPosRankSum=2.111;VQSLOD=1.6084;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:33,0:33:5.41:49,5,0	1/1:4,11:15:25.36:265,25,0	0/0:42,0:11:20.95:0,21,200	0/0:45,0:11:23.98:0,24,216	1/1:11,0:11:17.85:158,18,0	0/1:16,0:17:12.41:12,0,118	0/0:26,0:26:31.41:0,31,270	1/1:31,0:30:2.62:446,3,0	0/1:13,0:13:55.91:56,0,58	0/1:20,0:20:14.57:410,0,15	1/1:16,1:17:22.24:209,22,0	1/1:21,0:21:8.24:125,8,0	0/1:19,0:19:14.81:97,0,15	0/1:18,1:19:15.79:217,0,16	0/1:15,0:15:4.02:4,0,181	0/1:17,0:17:11.36:11,0,165	0/1:24,0:23:6.17:6,0,204	0/1:3,11:14:8.31:99,0,8	0/0:13,0:12:26.66:0,27,190	0/0:10,0:10:22.48:0,22,183	1/1:26,1:24:12.38:142,12,0	0/1:12,0:12:31.29:31,0,79	0/1:9,1:10:2.16:72,0,2	0/1:32,1:34:10.20:78,0,10	0/0:14,0:14:15.35:0,15,124	1/1:25,0:25:28.72:495,29,0	1/1:24,0:23:24.10:159,24,0	1/1:12,0:12:5:26,5,0
chr10	6284586	.	C	CAA	2897.47	PASS	AB=0.982;AC=21;AF=0.375;AN=56;BaseQRankSum=4.119;DP=579;FS=4.470;HRun=1;HaplotypeScore=97.3746;InbreedingCoeff=0.2352;MQ=52.33;MQ0=26;MQRankSum=1.506;QD=9.26;ReadPosRankSum=2.453;VQSLOD=0.7512;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:7.63:0,8,45	0/1:13,0:13:18.07:119,0,18	0/0:40,0:9:20.91:0,21,178	0/0:44,0:10:26.89:0,27,235	1/1:10,1:11:17.84:132,18,0	0/0:17,0:17:13.89:0,14,157	0/0:27,0:27:31.40:0,31,270	1/1:32,0:31:69.66:708,70,0	0/1:13,0:13:0.84:1,0,60	0/1:19,0:19:34.16:249,0,34	0/1:16,1:17:17.53:90,0,18	0/1:21,0:21:0.29:57,0,0	0/1:19,0:19:13.87:36,0,14	0/1:19,1:20:32.12:84,0,32	0/0:15,0:15:19.24:0,19,187	0/0:17,0:16:10.29:0,10,160	0/0:23,0:22:23.82:0,24,218	0/1:15,1:16:28.20:81,0,28	0/0:14,0:13:32.68:0,33,234	0/0:11,0:11:17.50:0,18,154	0/1:28,1:26:6.30:91,0,6	0/0:12,0:12:7.50:0,8,84	0/1:9,0:9:3.11:40,0,3	0/1:33,0:33:36.28:36,0,55	0/0:14,0:14:13.36:0,13,125	1/1:2,23:26:64.98:836,65,0	1/1:1,21:22:26.45:423,26,0	1/1:0,11:12:6.02:94,6,0
chr10	6284617	.	A	ACACACC	2535.86	PASS	AB=0.882;AC=29;AF=0.518;AN=56;BaseQRankSum=-0.503;DP=506;FS=0.467;HRun=0;HaplotypeScore=133.8511;InbreedingCoeff=0.2564;MQ=61.11;MQ0=11;MQRankSum=-2.095;QD=8.63;ReadPosRankSum=-2.057;VQSLOD=2.0123;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:25.18:0,25,209	1/1:9,0:9:10.40:59,10,0	0/0:31,0:11:19.33:0,19,177	0/0:39,0:24:49.12:0,49,512	0/1:11,0:12:52.44:52,0,85	1/1:15,0:16:36.35:369,36,0	1/1:4,11:21:6.02:124,6,0	0/0:37,0:37:98.73:0,99,834	1/1:3,11:16:10.59:241,11,0	0/1:15,0:15:99:169,0,142	0/1:10,0:11:28.03:69,0,28	0/1:14,0:14:91.53:128,0,92	0/1:9,0:9:19.96:112,0,20	0/1:20,0:20:90.97:91,0,187	1/1:4,0:18:8.67:84,9,0	1/1:5,8:15:5.35:121,5,0	0/1:4,0:31:29.65:45,0,30	0/0:13,0:13:13.94:0,14,183	1/1:15,0:15:34.87:354,35,0	0/1:2,0:9:9.84:70,0,10	0/0:18,0:16:16.06:0,16,178	1/1:10,1:11:3.51:177,4,0	1/1:8,0:8:3.01:58,3,0	0/1:26,0:26:4.81:5,0,179	1/1:17,0:17:41.81:396,42,0	0/0:21,0:21:3.57:0,4,496	0/0:22,0:21:43.73:0,44,383	0/0:8,0:8:15:0,15,142
chr10	6286034	.	T	TCACACACACA	12060.03	PASS	AB=1.000;AC=51;AF=0.911;AN=56;BaseQRankSum=-0.183;DP=651;FS=3.100;HRun=0;HaplotypeScore=269.9222;InbreedingCoeff=0.5210;MQ=57.87;MQ0=3;MQRankSum=-1.020;QD=20.69;ReadPosRankSum=2.313;VQSLOD=3.8966;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:29:8.70:135,9,0	1/1:9,0:9:18.06:631,18,0	0/0:35,0:25:20.93:0,21,425	0/0:33,0:29:30.21:0,30,613	1/1:35,0:35:13.64:251,14,0	1/1:11,0:11:0.47:1,0,0	1/1:34,0:31:21.54:556,22,0	1/1:24,0:24:33.11:978,33,0	1/1:25,0:25:11.12:265,11,0	1/1:30,0:30:50.42:1463,50,0	1/1:15,0:15:2.77:41,3,0	1/1:15,0:15:9.03:174,9,0	1/1:31,0:31:38.47:1186,38,0	1/1:30,0:30:14.78:582,15,0	1/1:21,0:21:2.98:131,3,0	1/1:29,0:29:27.55:691,28,0	1/1:22,0:22:9.03:226,9,0	1/1:12,0:12:21.03:487,21,0	1/1:23,0:22:0.81:769,1,0	1/1:24,0:23:5.51:70,6,0	1/1:28,0:27:6.17:91,6,0	1/1:15,0:13:6.02:120,6,0	0/1:16,0:16:0:0,0,0	1/1:31,0:30:17.22:407,17,0	1/1:25,0:23:0.55:379,1,0	1/1:11,11:25:46.02:1187,46,0	1/1:3,10:14:12.51:513,13,0	1/1:3,3:9:18.06:727,18,0
chr10	6286049	.	C	CAT	1482.95	PASS	AB=0.934;AC=15;AF=0.268;AN=56;BaseQRankSum=1.801;DP=765;FS=1.502;HRun=0;HaplotypeScore=182.5549;InbreedingCoeff=0.0023;MQ=49.14;MQ0=4;MQRankSum=-1.120;QD=4.07;ReadPosRankSum=4.039;VQSLOD=2.6688;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:28,24:51:11.71:12,0,107	1/1:9,0:9:5.39:29,5,0	0/0:38,0:23:65.72:0,66,741	0/0:40,0:36:89.50:0,90,1052	0/1:38,0:38:55.37:193,0,55	0/0:12,0:12:8.98:0,9,72	0/0:38,0:35:39.81:0,40,365	0/0:27,0:27:66.45:0,66,532	0/0:23,0:23:14.95:0,15,122	0/1:34,0:34:68.96:384,0,69	0/1:20,0:20:0.10:169,0,0	0/1:11,17:28:21.76:25,0,22	0/1:29,0:30:89.32:153,0,89	1/1:31,0:31:15.86:117,16,0	0/0:28,0:28:44.72:0,45,352	0/0:34,0:34:41.51:0,42,331	0/0:24,0:24:29.66:0,30,209	0/1:12,0:12:35.22:147,0,35	0/0:25,0:24:56.87:0,57,431	0/0:28,0:27:5.66:0,6,170	0/1:39,0:38:23.42:280,0,23	0/0:15,0:13:14.27:0,14,120	0/0:11,17:28:2.84:0,3,23	0/1:30,0:29:75.63:84,0,76	0/0:26,0:24:7.49:0,7,138	0/1:23,0:23:44.87:45,0,198	0/1:18,0:18:3.02:3,0,111	0/0:15,0:15:9.16:0,9,175
chr10	6287149	.	A	AT	10512.80	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=-15.022;DP=632;FS=7.651;HRun=8;HaplotypeScore=56.1677;InbreedingCoeff=0.9856;MQ=74.65;MQ0=0;MQRankSum=-1.803;QD=28.96;ReadPosRankSum=0.904;VQSLOD=5.1711;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,26:28:72.17:816,72,0	1/1:1,9:10:24.07:277,24,0	0/0:15,0:15:26.96:0,27,247	0/0:12,0:11:25.30:0,25,207	1/1:3,25:28:72.13:801,72,0	0/0:28,0:28:72.03:0,72,659	0/0:22,0:22:60.02:0,60,549	1/1:3,33:35:71.81:1070,72,0	0/0:25,0:25:69.03:0,69,631	1/1:3,24:27:75.20:853,75,0	1/1:1,17:18:51.11:574,51,0	1/1:2,26:28:75.22:866,75,0	1/1:2,17:19:51.15:589,51,0	1/1:5,14:20:44.94:486,45,0	0/0:31,0:31:93.05:0,93,851	0/0:17,0:17:45:0,45,406	0/0:26,0:26:78.04:0,78,714	1/1:2,22:24:63.19:727,63,0	0/0:15,0:15:42:0,42,380	0/0:34,0:34:87.03:0,87,792	1/1:2,15:17:19.77:428,20,0	0/0:21,0:21:60:0,60,541	1/1:5,19:24:6.63:538,7,0	1/1:1,15:16:39.12:450,39,0	0/0:23,0:23:60.01:0,60,541	1/1:6,26:32:81.24:931,81,0	1/1:0,18:18:45.13:520,45,0	1/1:1,17:18:51.15:588,51,0
chr10	6287400	.	TC	T	2153.27	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-0.114;DP=570;FS=0.462;HRun=5;HaplotypeScore=85.0101;InbreedingCoeff=0.9886;MQ=88.92;MQ0=0;MQRankSum=-3.518;QD=26.26;ReadPosRankSum=1.512;VQSLOD=3.4845;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,111,1383	0/0:12,0:12:33.08:0,33,407	0/0:21,0:21:40.54:0,41,681	0/0:26,0:25:65.97:0,66,784	0/0:19,0:19:47.83:0,48,550	0/0:12,0:12:34:0,34,450	0/0:13,0:13:39.12:0,39,519	1/1:2,30:32:87.20:963,87,0	0/0:16,0:16:48.16:0,48,653	0/0:22,0:22:51.12:0,51,603	0/0:12,0:12:27.08:0,27,339	0/0:30,0:30:78.22:0,78,1009	0/0:19,0:19:54.11:0,54,673	0/0:16,0:16:45.14:0,45,601	0/0:18,0:18:46.02:0,46,587	0/0:18,0:18:51.16:0,51,683	0/0:34,0:34:99:0,99,1304	0/0:21,0:21:57.19:0,57,776	0/0:25,0:25:70.41:0,70,887	0/0:21,0:21:53.89:0,54,572	0/0:28,0:28:67.03:0,67,811	0/0:16,0:16:30.79:0,31,469	0/0:13,0:13:34.64:0,35,414	0/0:21,0:21:61.08:0,61,822	0/0:15,0:15:45.05:0,45,464	1/1:8,14:22:12.11:530,12,0	1/1:3,19:22:54.15:612,54,0	1/1:0,6:6:18.05:204,18,0
chr10	6287474	.	AGACTCCCGAGTGTT	A	4205.29	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.556;DP=609;FS=5.262;HRun=0;HaplotypeScore=246.6967;InbreedingCoeff=0.9938;MQ=75.16;MQ0=0;MQRankSum=-8.032;QD=95.57;ReadPosRankSum=2.636;VQSLOD=3.0897;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,144,9456	0/0:9,0:9:27.09:0,27,1681	0/0:33,0:33:90.78:0,91,5347	0/0:28,0:28:68.57:0,69,4210	0/0:18,0:18:54.19:0,54,3499	0/0:20,0:20:60.21:0,60,4117	0/0:23,0:23:69.24:0,69,4549	0/0:20,0:20:60.19:0,60,3801	0/0:19,0:19:54.19:0,54,3715	0/0:27,0:27:81.28:0,81,5185	0/0:14,0:14:39.13:0,39,2410	0/0:12,0:12:36.12:0,36,2328	0/0:24,0:24:72.25:0,72,4782	0/0:15,0:15:42.14:0,42,2734	0/0:14,0:14:42.14:0,42,2918	0/0:18,0:18:51.17:0,51,3510	0/0:27,0:27:81.28:0,81,5372	0/0:24,0:24:72.25:0,72,4983	0/0:26,0:26:75.26:0,75,4284	0/0:22,0:22:63.22:0,63,4398	0/0:45,0:45:99:0,132,9043	0/0:18,0:18:54.19:0,54,3363	0/0:16,0:16:48.16:0,48,3233	0/0:21,0:21:63.22:0,63,4285	0/0:23,0:23:66.23:0,66,4509	1/1:5,16:21:48.15:1926,48,0	1/1:5,13:18:42.14:1640,42,0	1/1:0,5:5:15.05:640,15,0
chr10	6288515	.	GACACACACAC	G	2585.38	PASS	AB=0.889;AC=19;AF=0.365;AN=52;BaseQRankSum=7.772;DP=629;FS=19.169;HRun=0;HaplotypeScore=203.1342;InbreedingCoeff=0.7862;MQ=72.33;MQ0=17;MQRankSum=-7.668;QD=13.06;ReadPosRankSum=1.602;VQSLOD=1.4160;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:20,4:24:6.90:132,7,0	0/0:7,0:7:6.02:0,6,135	./.	0/0:44,0:26:0.26:0,0,2	0/1:14,2:16:73.82:74,0,254	0/0:25,0:27:44.49:0,44,1572	0/0:33,0:33:33.58:0,34,1349	./.	0/0:17,0:18:21.05:0,21,761	0/0:18,0:23:37.04:0,37,663	0/0:13,0:17:15.05:0,15,294	1/1:10,3:14:9.03:233,9,0	1/1:14,3:17:9.03:267,9,0	1/1:5,6:11:12.04:308,12,0	0/0:22,0:27:42.14:0,42,1477	0/0:8,0:11:16.87:0,17,390	0/0:22,0:22:36.07:0,36,932	0/0:25,0:29:33.92:0,34,597	0/0:18,0:19:16.87:0,17,288	0/0:18,0:24:26.68:0,27,491	0/0:18,0:18:18.02:0,18,357	0/0:14,0:20:23.63:0,24,560	1/1:16,8:25:12.01:340,12,0	1/1:25,0:25:6:94,6,0	0/0:12,0:12:21.03:0,21,750	1/1:21,0:31:27.09:629,27,0	1/1:5,0:20:24.08:559,24,0	1/1:11,0:13:6.02:140,6,0
chr10	6290423	.	CA	C	7467.47	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=13.160;DP=655;FS=29.344;HRun=1;HaplotypeScore=78.2675;InbreedingCoeff=0.9997;MQ=57.47;MQ0=25;MQRankSum=-0.307;QD=25.84;ReadPosRankSum=2.518;VQSLOD=3.3242;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,42:39:66.22:917,66,0	1/1:0,10:10:30.10:417,30,0	0/0:31,0:15:44.76:0,45,594	0/0:29,0:19:50.90:0,51,685	1/1:0,24:24:36.08:480,36,0	0/0:22,0:22:42.05:0,42,593	0/0:30,0:29:51.13:0,51,783	0/0:32,0:17:48.14:0,48,724	0/0:24,0:24:51.17:0,51,804	1/1:0,17:16:45.11:604,45,0	1/1:0,26:26:42.14:583,42,0	1/1:0,21:21:39:541,39,0	1/1:0,26:25:47.98:665,48,0	1/1:0,18:18:38.96:513,39,0	0/0:23,0:23:42.09:0,42,641	0/0:15,0:15:39.12:0,39,598	0/0:23,0:23:39.12:0,39,598	1/1:1,19:20:33.11:459,33,0	0/0:19,0:11:30.10:0,30,477	0/0:20,0:20:57.10:0,57,843	1/1:0,36:34:69.02:933,69,0	0/0:20,0:20:53.81:0,54,774	1/1:0,23:23:44.90:576,45,0	1/1:0,26:25:59.86:780,60,0	0/0:19,0:19:54.18:0,54,862	0/0:28,0:28:84.26:0,84,1296	0/0:19,0:19:45.15:0,45,709	0/0:12,0:12:36.12:0,36,575
chr10	6290666	.	A	AG	9019.52	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-10.472;DP=667;FS=6.583;HRun=5;HaplotypeScore=60.7404;InbreedingCoeff=0.9989;MQ=65.17;MQ0=15;MQRankSum=0.265;QD=31.87;ReadPosRankSum=4.382;VQSLOD=5.4001;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,40:43:90.29:1184,90,0	1/1:1,9:9:21.07:276,21,0	0/0:21,0:18:27.01:0,27,443	0/0:19,0:17:33.15:0,33,434	1/1:1,23:24:63.20:822,63,0	0/0:20,0:20:48.11:0,48,508	0/0:29,0:27:63.14:0,63,668	0/0:30,0:22:57.10:0,57,599	0/0:25,0:25:66.17:0,66,709	1/1:0,14:14:42.14:552,42,0	1/1:2,23:25:66.21:860,66,0	1/1:2,31:33:84.27:1103,84,0	1/1:0,14:15:30.10:391,30,0	1/1:1,20:21:54.18:711,54,0	0/0:33,0:33:83.98:0,84,895	0/0:23,0:23:57.13:0,57,606	0/0:24,0:24:54.14:0,54,580	1/1:4,23:27:35.87:798,36,0	0/0:27,0:23:66.16:0,66,701	0/0:21,0:21:54.14:0,54,580	1/1:1,21:22:54.18:711,54,0	0/0:27,0:26:66.17:0,66,709	1/1:2,13:15:42.14:546,42,0	1/1:3,31:34:81.26:1066,81,0	0/0:20,0:20:48.08:0,48,502	0/0:24,1:25:26.67:0,27,626	0/0:28,0:28:78.20:0,78,837	0/0:12,0:12:30.08:0,30,322
chr10	6293905	.	GGTGTGTGTGT	G	4873.74	PASS	AB=0.818;AC=22;AF=0.407;AN=54;BaseQRankSum=1.937;DP=820;FS=1.777;HRun=0;HaplotypeScore=277.6142;InbreedingCoeff=0.6633;MQ=52.95;MQ0=26;MQRankSum=-8.256;QD=13.43;ReadPosRankSum=-1.683;VQSLOD=2.8173;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:31:38.73:0,39,956	0/0:8,0:14:14.08:0,14,509	./.	0/0:55,0:17:0.47:0,0,1	0/0:23,0:31:39.13:0,39,1466	0/1:25,4:30:11.36:477,0,11	1/1:17,9:26:7.15:309,7,0	0/1:38,0:37:5.12:5,0,108	1/1:21,9:30:21.07:596,21,0	0/0:23,0:33:58.75:0,59,2115	0/0:12,0:16:24.08:0,24,813	0/0:23,0:26:45.15:0,45,1824	0/0:15,0:18:27.07:0,27,750	0/0:19,0:20:15.05:0,15,382	1/1:19,17:37:36.12:1000,36,0	1/1:18,14:34:36.09:889,36,0	1/1:23,1:25:17.89:396,18,0	0/0:16,0:22:41.20:0,41,1233	1/1:21,4:24:17.26:263,17,0	1/1:19,9:28:8.93:101,9,0	0/0:39,0:40:39.02:0,39,1496	1/1:17,9:26:15.03:314,15,0	0/0:28,0:32:48.08:0,48,1246	0/0:22,0:32:35.64:0,36,977	1/1:15,11:26:23.78:453,24,0	0/0:31,0:35:43.51:0,44,475	0/1:13,1:22:57.16:57,0,232	0/1:7,0:12:13.34:13,0,50
chr10	6294817	.	AAGGG	A	4068.46	PASS	AB=0.983;AC=27;AF=0.482;AN=56;BaseQRankSum=6.480;DP=619;FS=6.906;HRun=0;HaplotypeScore=150.3305;InbreedingCoeff=0.4157;MQ=52.60;MQ0=9;MQRankSum=0.711;QD=10.94;ReadPosRankSum=-1.225;VQSLOD=2.5910;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:32,1:32:70.11:544,70,0	1/1:12,0:11:7.69:212,8,0	0/0:13,0:8:17.93:0,18,145	0/0:9,0:7:17.97:0,18,155	1/1:25,1:25:49.88:371,50,0	0/0:20,0:20:24.05:0,24,369	0/0:31,0:31:33.76:0,34,405	0/1:37,0:35:62.29:62,0,448	0/0:23,0:23:36.03:0,36,514	1/1:18,0:18:0.50:213,1,0	1/1:11,1:12:20.51:225,21,0	0/1:27,2:29:99:261,0,100	1/1:21,0:20:8.67:190,9,0	0/1:17,1:18:30.86:213,0,31	0/0:18,0:18:20.62:0,21,242	0/0:35,0:35:62.97:0,63,806	0/0:43,0:43:48.75:0,49,921	1/1:22,1:23:59.02:436,59,0	0/0:20,0:18:13.48:0,13,337	0/1:23,0:23:20.65:21,0,422	1/1:26,0:26:37.18:362,37,0	0/0:23,0:23:3.31:0,3,563	1/1:14,1:15:19.02:242,19,0	1/1:36,0:35:39.35:530,39,0	0/0:12,0:12:20.96:0,21,242	0/1:20,0:20:66.52:67,0,423	0/1:15,0:15:45.73:46,0,183	0/1:8,0:7:72.92:73,0,123
chr10	6294821	.	G	GAGGA	6203.67	PASS	AB=0.840;AC=47;AF=0.904;AN=52;BaseQRankSum=-3.532;DP=645;FS=1.137;HRun=0;HaplotypeScore=156.5659;InbreedingCoeff=-0.1173;MQ=52.70;MQ0=10;MQRankSum=2.885;QD=9.88;ReadPosRankSum=-0.226;VQSLOD=3.9950;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:33,0:32:11.21:131,11,0	1/1:12,0:11:11.02:96,11,0	./.	./.	1/1:25,0:24:14.20:75,14,0	1/1:4,17:21:12.04:291,12,0	0/1:11,22:35:39.57:132,0,40	1/1:35,0:32:5.86:42,6,0	1/1:7,15:22:18.06:436,18,0	1/1:18,0:18:14.09:115,14,0	1/1:12,0:12:9.84:79,10,0	0/1:27,0:27:9.89:60,0,10	0/1:21,0:20:1.69:124,0,2	1/1:20,0:20:18.15:123,18,0	1/1:3,16:21:12.04:287,12,0	1/1:14,25:40:24.08:581,24,0	0/1:15,27:43:16.76:689,0,17	1/1:24,0:24:21.60:142,22,0	1/1:12,7:18:23.95:400,24,0	1/1:9,15:24:45.02:852,45,0	1/1:28,0:28:20.94:103,21,0	1/1:11,14:26:33.07:633,33,0	1/1:19,0:19:6.81:150,7,0	1/1:40,0:39:14.36:220,14,0	1/1:4,9:13:9.03:218,9,0	0/1:21,0:21:7.68:47,0,8	1/1:18,0:18:12.24:94,12,0	1/1:10,0:8:11.95:84,12,0
chr10	6295368	.	G	GCTTC	6549.06	PASS	AC=36;AF=0.720;AN=50;BaseQRankSum=1.239;DP=680;FS=6.639;HRun=0;HaplotypeScore=126.0708;InbreedingCoeff=0.9135;MQ=62.36;MQ0=3;MQRankSum=-6.064;QD=14.88;ReadPosRankSum=-2.795;VQSLOD=3.5025;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:41:36.03:0,36,330	0/0:10,0:10:18.06:0,18,275	./.	./.	0/0:22,0:23:39.09:0,39,580	1/1:17,0:24:15.03:236,15,0	1/1:22,0:21:24.05:325,24,0	1/1:23,0:22:3.01:40,3,0	1/1:19,0:33:24.08:439,24,0	0/0:33,0:33:39.12:0,39,577	0/0:21,0:21:33.11:0,33,507	1/1:13,10:23:21.07:491,21,0	1/1:19,10:30:30.10:652,30,0	1/1:13,12:25:30.10:671,30,0	1/1:9,0:14:12.04:211,12,0	1/1:9,0:19:30.10:521,30,0	1/1:20,3:31:26.98:395,27,0	0/0:23,0:23:36.11:0,36,529	1/1:15,0:19:9.03:153,9,0	1/1:18,1:22:11.93:145,12,0	0/0:57,0:58:84.25:0,84,1228	1/1:27,0:27:11.51:102,12,0	1/1:12,13:25:27.02:563,27,0	1/1:16,19:35:30.10:701,30,0	1/1:14,3:20:23.57:404,24,0	1/1:15,1:26:26.99:397,27,0	1/1:17,0:22:6.08:102,6,0	./.
chr10	6298343	.	C	CTT	23658.02	PASS	AC=52;AF=0.963;AN=54;BaseQRankSum=-2.333;DP=447;FS=0.000;HRun=1;HaplotypeScore=40.2366;InbreedingCoeff=0.8071;MQ=63.85;MQ0=0;MQRankSum=-2.443;QD=53.28;ReadPosRankSum=2.308;VQSLOD=4.6014;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,21:21:54.19:1097,54,0	1/1:0,6:7:15.01:264,15,0	0/0:3,0:3:5.98:0,6,63	./.	1/1:1,33:34:99:1971,99,0	1/1:1,12:14:33.11:667,33,0	1/1:0,6:6:15.05:305,15,0	1/1:1,27:29:84.26:1593,84,0	1/1:0,10:10:21.07:427,21,0	1/1:0,26:27:81.24:1509,81,0	1/1:0,20:22:57.20:1158,57,0	1/1:0,6:6:18.06:366,18,0	1/1:0,16:16:48.16:975,48,0	1/1:0,8:8:18.06:366,18,0	1/1:0,8:9:21.07:427,21,0	1/1:0,11:12:30.10:610,30,0	1/1:0,27:27:78.27:1584,78,0	1/1:0,7:7:15.05:305,15,0	1/1:0,8:8:24.08:436,24,0	1/1:0,27:28:78.23:1545,78,0	1/1:0,16:17:42.14:853,42,0	1/1:1,11:12:32.98:547,33,0	1/1:1,15:16:36.12:731,36,0	1/1:0,8:8:18.06:366,18,0	1/1:1,26:29:75.26:1524,75,0	1/1:0,26:27:81.27:1602,81,0	1/1:1,32:33:96.33:1945,96,0	1/1:3,8:11:24.08:488,24,0
chr10	6299172	.	C	CT	1363.49	PASS	AB=0.667;AC=31;AF=0.554;AN=56;BaseQRankSum=8.895;DP=239;FS=2.445;HRun=8;HaplotypeScore=46.7754;InbreedingCoeff=0.7873;MQ=82.59;MQ0=6;MQRankSum=-5.635;QD=11.65;ReadPosRankSum=-0.707;VQSLOD=1.9810;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,1:10:13.10:111,13,0	0/1:1,0:2:0.84:9,0,1	0/0:23,0:14:15.88:0,16,133	0/0:13,0:10:5.99:0,6,52	1/1:3,0:7:10.45:64,10,0	0/0:14,0:14:27.01:0,27,247	0/0:7,0:7:18.01:0,18,165	1/1:6,12:18:34.61:349,35,0	0/0:10,0:10:30.02:0,30,274	1/1:4,0:5:6.49:45,6,0	1/1:4,0:6:7.05:55,7,0	1/1:4,0:7:17.14:92,17,0	1/1:1,0:3:8.52:43,9,0	1/1:5,0:8:14.33:77,14,0	0/0:8,0:8:21.01:0,21,192	0/0:5,0:5:15.01:0,15,137	0/0:11,0:11:23.05:0,23,241	1/1:7,0:12:8.01:100,8,0	0/0:14,0:13:36.02:0,36,329	0/0:4,0:4:12.01:0,12,110	1/1:6,1:7:6.07:87,6,0	0/0:1,0:1:3:0,3,27	1/1:1,1:2:5.96:54,6,0	1/1:0,0:2:5.68:29,6,0	0/0:11,0:11:33.02:0,33,302	1/1:2,4:7:11.83:97,12,0	1/1:2,5:7:5.08:99,5,0	1/1:3,9:11:12.23:259,12,0
chr10	6299207	.	TA	T	1818.06	PASS	AB=0.819;AC=27;AF=0.482;AN=56;BaseQRankSum=3.058;DP=225;FS=11.760;HRun=1;HaplotypeScore=47.1013;InbreedingCoeff=0.7189;MQ=58.97;MQ0=4;MQRankSum=-7.843;QD=20.43;ReadPosRankSum=-1.236;VQSLOD=2.1439;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,6:7:18.02:228,18,0	1/1:0,2:2:6.02:83,6,0	0/0:12,0:6:15.04:0,15,203	0/0:9,0:7:19.26:0,19,203	1/1:0,5:5:15.01:186,15,0	0/0:11,0:11:30.10:0,30,439	0/0:5,0:5:15.05:0,15,219	0/1:22,0:20:3.26:3,0,120	0/0:12,0:11:29.83:0,30,383	1/1:0,4:4:12.04:156,12,0	1/1:0,3:3:9.03:125,9,0	1/1:2,5:6:15.05:208,15,0	1/1:2,2:3:9:104,9,0	1/1:0,5:5:15.05:208,15,0	0/0:10,0:10:30.03:0,30,412	0/0:5,0:5:15.05:0,15,219	0/0:17,0:17:21.99:0,22,347	1/1:1,11:12:36.08:478,36,0	0/0:7,0:6:18.05:0,18,241	0/0:8,0:8:18.04:0,18,242	1/1:3,0:3:8.97:85,9,0	1/1:2,0:2:2.92:17,3,0	0/1:1,2:3:5.78:53,0,6	1/1:1,1:2:5.98:61,6,0	0/0:11,0:11:33.07:0,33,451	0/1:5,1:5:13.82:30,0,14	0/0:6,0:6:9.33:0,9,31	0/0:23,0:23:44.66:0,45,164
chr10	6300213	.	GC	G	233.39	PASS	AC=4;AF=0.133;AN=30;BaseQRankSum=-3.084;DP=521;FS=0.000;HRun=3;HaplotypeScore=20.8599;InbreedingCoeff=0.4598;MQ=9.70;MQ0=448;MQRankSum=-0.320;QD=3.70;ReadPosRankSum=0.698;VQSLOD=-0.0740;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	0/0:3,0:3:6.02:0,6,80	0/0:33,0:3:9.03:0,9,129	0/0:19,0:2:6.02:0,6,86	./.	0/0:26,0:8:24.08:0,24,343	./.	./.	./.	0/0:26,0:2:3.01:0,3,37	0/0:31,0:3:9.03:0,9,129	0/0:24,0:5:12.04:0,12,172	0/0:23,0:2:3.01:0,3,43	0/0:30,0:2:3.01:0,3,43	./.	./.	0/0:11,0:1:3.01:0,3,43	./.	0/0:18,0:8:21.07:0,21,291	0/0:6,0:1:3.01:0,3,43	./.	0/0:17,0:1:3.01:0,3,43	1/1:23,4:5:12.04:149,12,0	1/1:28,8:9:15.05:185,15,0	./.
chr10	6300310	.	TC	T	870.41	PASS	AB=0.862;AC=14;AF=0.438;AN=32;BaseQRankSum=5.551;DP=548;FS=0.000;HRun=3;HaplotypeScore=27.8954;InbreedingCoeff=0.3643;MQ=14.41;MQ0=349;MQRankSum=0.141;QD=3.58;ReadPosRankSum=2.752;VQSLOD=-0.1800;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:30,6:5:15.05:186,15,0	./.	./.	./.	./.	0/0:30,0:9:27.09:0,27,378	0/0:21,0:8:18.06:0,18,250	0/0:18,0:12:36.08:0,36,489	0/1:33,5:19:97.28:97,0,493	./.	./.	0/1:17,4:5:28.03:133,0,28	1/1:13,5:4:12.04:145,12,0	1/1:16,3:4:9.03:111,9,0	0/1:32,7:19:99:166,0,456	0/0:24,0:14:39.09:0,39,529	0/1:24,4:7:93.35:93,0,106	./.	0/0:19,0:5:15.05:0,15,216	./.	./.	1/1:28,1:1:3.01:37,3,0	./.	1/1:12,3:3:3.01:37,3,0	./.	0/0:32,0:6:18.06:0,18,259	0/0:34,0:10:30.10:0,30,431	./.
chr10	6301508	.	A	AT	2308.93	PASS	AB=1.000;AC=26;AF=0.464;AN=56;BaseQRankSum=-0.221;DP=321;FS=0.752;HRun=6;HaplotypeScore=28.0915;InbreedingCoeff=0.7522;MQ=39.99;MQ0=68;MQRankSum=-4.290;QD=20.25;ReadPosRankSum=1.348;VQSLOD=2.2850;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,2:4:6.02:75,6,0	1/1:4,8:12:33.09:383,33,0	0/0:11,0:4:5.56:0,6,61	0/0:9,0:3:6.01:0,6,61	1/1:0,10:10:30.10:377,30,0	0/0:7,0:7:18.04:0,18,183	0/0:8,0:6:18.04:0,18,183	0/0:27,0:15:45.10:0,45,459	0/0:13,0:8:21.04:0,21,214	1/1:1,11:12:36.11:451,36,0	1/1:0,7:7:18.06:226,18,0	1/1:5,4:4:9.03:113,9,0	1/1:1,7:7:21.07:263,21,0	1/1:5,4:5:9.03:113,9,0	0/1:11,0:6:11.04:11,0,134	0/1:5,0:4:17.09:17,0,80	0/0:27,0:25:60.13:0,60,611	1/1:3,3:3:9.03:113,9,0	0/0:17,0:11:9.44:0,9,282	0/0:9,0:6:18.04:0,18,184	1/1:1,6:6:15.05:189,15,0	0/0:9,0:5:12.03:0,12,122	1/1:3,3:3:9.03:113,9,0	1/1:3,3:3:6.02:75,6,0	0/0:16,0:14:42.10:0,42,428	0/0:14,0:13:39.09:0,39,397	0/0:12,0:8:24.05:0,24,245	0/0:28,0:22:66.15:0,66,673
chr10	6301516	.	T	TC	122.67	PASS	AB=0.850;AC=4;AF=0.071;AN=56;BaseQRankSum=4.498;DP=284;FS=5.164;HRun=1;HaplotypeScore=37.4910;InbreedingCoeff=-0.1013;MQ=43.60;MQ0=20;MQRankSum=-3.318;QD=3.23;ReadPosRankSum=3.696;VQSLOD=0.1017;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:5:11.97:0,12,136	0/1:9,4:13:99:152,0,138	0/0:9,0:4:6.05:0,6,85	0/0:10,0:4:6.02:0,6,84	0/0:11,0:11:29.25:0,29,174	0/0:7,0:7:18.06:0,18,251	0/0:7,0:6:18.06:0,18,251	0/0:20,0:18:54.18:0,54,755	0/0:9,0:7:21.07:0,21,293	0/0:12,0:12:35.98:0,36,381	0/0:7,0:7:17.52:0,18,102	0/0:5,0:4:8.83:0,9,54	0/0:7,0:7:20.68:0,21,134	0/0:5,0:5:11.84:0,12,97	0/1:6,1:6:28.95:29,0,191	0/1:4,1:4:35:35,0,114	0/0:29,0:28:72.24:0,72,1003	0/0:7,0:5:11.99:0,12,118	0/1:12,1:11:14.47:14,0,376	0/0:8,0:6:18.06:0,18,251	0/0:6,0:6:14.92:0,15,142	0/0:7,0:5:12.04:0,12,168	0/0:4,0:3:8.81:0,9,55	0/0:5,0:3:6.02:0,6,74	0/0:17,0:15:42.14:0,42,587	0/0:13,0:13:39.13:0,39,545	0/0:9,0:8:24.08:0,24,335	0/0:25,0:22:66.22:0,66,922
chr10	6302434	.	CAG	C	1699.10	PASS	AB=0.986;AC=22;AF=0.393;AN=56;BaseQRankSum=-0.540;DP=487;FS=12.793;HRun=0;HaplotypeScore=104.4010;InbreedingCoeff=0.5762;MQ=47.11;MQ0=18;MQRankSum=0.665;QD=7.11;ReadPosRankSum=-0.137;VQSLOD=2.4761;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:20.84:0,21,200	0/0:6,0:6:8.54:0,9,142	0/0:26,0:6:0:0,0,0	0/1:42,0:17:10.20:10,0,52	0/0:13,0:13:3.01:0,3,47	1/1:6,13:18:6.98:174,7,0	1/1:10,8:18:18.06:221,18,0	0/1:23,0:22:15.33:15,0,47	1/1:7,9:16:12.04:148,12,0	0/0:21,0:20:39.04:0,39,552	0/0:14,3:16:12.02:0,12,155	0/1:16,1:17:25.04:25,0,176	0/1:15,0:15:10.02:10,0,135	0/0:15,0:15:14.94:0,15,287	1/1:4,10:12:9.03:111,9,0	1/1:6,12:17:21.06:247,21,0	0/0:15,0:15:3.01:0,3,33	0/0:11,0:11:18.06:0,18,285	1/1:1,10:12:33.10:403,33,0	1/1:9,7:14:14.99:167,15,0	0/0:12,0:12:14.94:0,15,210	1/1:1,16:17:12.04:140,12,0	0/0:11,0:10:5.51:0,6,57	0/0:19,0:18:24.08:0,24,371	1/1:5,7:12:20.09:224,20,0	0/0:26,0:22:42.95:0,43,296	0/0:21,0:21:21.52:0,22,136	0/0:11,0:10:15.23:0,15,69
chr10	6302436	.	G	GAC	1729.33	PASS	AB=0.605;AC=7;AF=0.125;AN=56;BaseQRankSum=-0.959;DP=494;FS=3.548;HRun=0;HaplotypeScore=107.3868;InbreedingCoeff=0.6144;MQ=46.68;MQ0=19;MQRankSum=0.366;QD=20.84;ReadPosRankSum=-0.411;VQSLOD=4.0145;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:23:32.87:0,33,357	0/0:7,0:7:11.52:0,12,155	0/0:25,0:5:6.75:0,7,40	0/0:42,0:17:3.33:0,3,186	0/0:12,0:12:3.01:0,3,45	0/0:19,0:18:20.26:0,20,114	0/0:18,0:18:5.08:0,5,98	1/1:5,17:21:20.54:488,21,0	0/0:18,0:18:18.08:0,18,106	0/0:21,0:20:50.41:0,50,608	0/0:17,0:16:17.97:0,18,193	0/0:16,0:16:20.33:0,20,200	0/0:17,0:17:12.57:0,13,184	0/0:15,0:15:30:0,30,355	0/0:16,0:14:8.77:0,9,51	0/0:18,0:17:20.47:0,20,118	0/0:16,0:16:8.95:0,9,88	0/0:12,0:12:26.99:0,27,320	0/0:10,0:11:16.61:0,17,155	0/0:14,0:12:5.76:0,6,109	0/0:12,0:12:12.93:0,13,185	0/0:17,0:16:14.69:0,15,89	0/0:12,0:11:11.94:0,12,119	0/0:20,0:19:29.55:0,30,358	0/0:12,0:12:16.08:0,16,131	1/1:14,12:21:31.66:603,32,0	0/1:8,15:23:23.27:381,0,23	1/1:7,5:11:26.95:403,27,0
chr10	6302446	.	G	GAGAGAC	1798.16	PASS	AB=0.941;AC=27;AF=0.563;AN=48;BaseQRankSum=-2.813;DP=443;FS=5.834;HRun=0;HaplotypeScore=121.2608;InbreedingCoeff=0.4352;MQ=44.01;MQ0=22;MQRankSum=-2.151;QD=7.72;ReadPosRankSum=-2.701;VQSLOD=0.8063;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:22:12:0,12,131	1/1:8,0:8:9.78:75,10,0	./.	./.	./.	0/0:18,0:17:2.88:0,3,42	0/0:16,0:16:2.65:0,3,19	0/1:15,0:14:15.72:33,0,16	0/0:16,0:16:5.92:0,6,40	1/1:20,0:19:11.99:193,12,0	1/1:15,0:14:5.81:63,6,0	1/1:9,6:15:11.69:271,12,0	1/1:12,6:19:1.99:215,2,0	1/1:16,0:16:12.04:209,12,0	0/0:14,0:12:3.01:0,3,41	0/1:17,0:16:4.67:5,0,122	0/0:12,0:12:2.97:0,3,20	1/1:7,4:11:3.01:75,3,0	0/0:12,0:11:8.06:0,8,88	0/0:9,0:8:5.98:0,6,54	0/1:11,0:14:5:56,0,5	./.	1/1:10,0:9:3.01:65,3,0	1/1:17,0:17:8.96:195,9,0	0/0:11,0:11:6.02:0,6,74	1/1:18,0:17:24.07:381,24,0	1/1:19,0:19:14.11:104,14,0	1/1:14,0:10:2.94:18,3,0
chr10	6302468	.	G	GACAGAG	1804.56	PASS	AB=1.000;AC=29;AF=0.580;AN=50;BaseQRankSum=-2.583;DP=343;FS=4.152;HRun=0;HaplotypeScore=105.5296;InbreedingCoeff=0.3854;MQ=35.94;MQ0=26;MQRankSum=-2.322;QD=7.61;ReadPosRankSum=2.227;VQSLOD=1.9735;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:16:11.87:0,12,131	1/1:6,0:6:9.78:75,10,0	./.	./.	0/1:14,0:14:0:0,0,0	0/1:13,0:12:1.36:1,0,37	0/0:9,0:9:2.65:0,3,19	0/1:18,0:15:15.73:33,0,16	0/0:13,0:13:0.68:0,1,32	1/1:17,0:15:11.99:193,12,0	1/1:9,0:8:5.81:63,6,0	1/1:14,0:14:11.69:271,12,0	1/1:16,0:16:1.99:215,2,0	1/1:6,4:10:12.04:209,12,0	0/0:11,0:11:3.01:0,3,41	0/1:14,0:14:4.94:5,0,122	0/0:11,0:10:2.97:0,3,20	1/1:11,0:11:3.01:75,3,0	0/0:9,0:6:8.06:0,8,88	0/0:5,0:3:5.98:0,6,54	0/1:15,0:15:5:56,0,5	./.	1/1:8,0:7:3.01:65,3,0	1/1:18,0:15:8.96:195,9,0	0/0:6,0:6:6.02:0,6,74	1/1:23,0:18:24.07:381,24,0	1/1:19,0:16:13.91:104,14,0	1/1:11,0:6:2.94:18,3,0
chr10	6302480	.	G	GAC	229.80	PASS	AB=0.961;AC=13;AF=0.260;AN=50;BaseQRankSum=1.962;DP=291;FS=0.975;HRun=0;HaplotypeScore=72.3346;InbreedingCoeff=0.0116;MQ=33.70;MQ0=35;MQRankSum=-1.042;QD=1.73;ReadPosRankSum=-0.158;VQSLOD=1.6626;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:12:12.01:0,12,135	0/0:6,0:6:11.23:0,11,149	./.	./.	0/1:10,0:10:0:0,0,0	0/0:11,0:10:1.45:0,1,40	0/0:11,0:8:5.51:0,6,44	0/0:20,0:17:16.70:0,17,303	0/0:11,0:11:8.88:0,9,76	0/0:12,1:11:4.59:0,5,366	0/0:8,0:7:9.02:0,9,118	1/1:12,0:11:11.66:94,12,0	0/1:11,0:12:11.92:12,0,96	0/1:11,1:10:34.62:35,0,58	0/0:8,0:8:3.01:0,3,41	0/1:9,0:9:1.16:1,0,112	0/0:9,0:8:4.56:0,5,34	0/1:8,0:8:22.78:23,0,144	0/0:8,0:4:8.92:0,9,98	0/0:4,0:2:5.98:0,6,55	0/0:11,0:11:14.98:0,15,198	./.	0/1:6,2:6:18.56:19,0,39	0/1:15,0:12:36.08:50,0,36	0/0:5,0:4:6.49:0,6,76	0/1:21,0:16:43.53:66,0,44	0/1:16,0:13:0.58:48,0,1	1/1:10,0:4:0.24:13,0,0
chr10	6302486	.	GACACACACACACACACAC	G	775.27	PASS	AB=0.875;AC=16;AF=0.320;AN=50;BaseQRankSum=2.340;DP=258;FS=14.634;HRun=0;HaplotypeScore=96.0450;InbreedingCoeff=0.5012;MQ=31.87;MQ0=37;MQRankSum=0.207;QD=10.62;ReadPosRankSum=-1.389;VQSLOD=0.3634;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:10:6.49:0,6,198	0/0:6,0:6:12.04:0,12,678	./.	0/0:8,0:2:2.98:0,3,22	0/0:9,0:9:0.47:0,0,1	1/1:3,6:8:3.90:50,4,0	./.	0/0:10,0:14:38.74:0,39,752	1/1:1,9:10:9.03:399,9,0	0/0:14,0:11:33.11:0,33,1989	0/0:7,0:7:9.03:0,9,601	0/0:11,0:10:9.50:0,10,380	0/0:12,0:12:18.95:0,19,787	0/0:10,0:8:11.97:0,12,540	1/1:2,3:5:3.01:50,3,0	1/1:4,4:8:3.01:147,3,0	0/1:8,0:8:11.36:11,0,108	0/0:9,0:8:18.06:0,18,968	1/1:7,1:3:6.02:204,6,0	1/1:4,0:2:3.01:40,3,0	0/0:11,0:10:15.05:0,15,1076	./.	0/0:6,0:5:12.04:0,12,457	0/0:11,0:8:6.42:0,6,555	1/1:3,0:2:2.96:19,3,0	0/1:14,0:14:2.77:3,0,582	0/0:12,0:12:8.94:0,9,115	0/0:7,0:2:3.01:0,3,47
chr10	6309565	.	GC	G	8713.12	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=11.141;DP=656;FS=1.738;HRun=1;HaplotypeScore=67.2034;InbreedingCoeff=0.9999;MQ=83.57;MQ0=0;MQRankSum=-0.958;QD=36.61;ReadPosRankSum=1.488;VQSLOD=5.2320;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,120,1918	0/0:15,0:15:45.11:0,45,691	0/0:24,0:24:69.21:0,69,1049	0/0:23,0:23:61.76:0,62,945	0/0:24,0:24:72.24:0,72,1120	1/1:0,17:17:51.17:713,51,0	1/1:0,21:21:51.17:713,51,0	0/0:31,0:31:93.31:0,93,1465	1/1:0,26:26:66.22:923,66,0	0/0:20,0:20:60.19:0,60,934	0/0:17,0:17:51.16:0,51,784	0/0:26,0:26:75.23:0,75,1151	0/0:26,0:26:78.27:0,78,1233	0/0:21,0:21:63.21:0,63,1002	1/1:0,25:25:66.22:922,66,0	1/1:0,24:24:69.23:965,69,0	1/1:0,30:30:78.26:1091,78,0	0/0:14,0:14:42.14:0,42,671	1/1:0,24:24:72.24:1006,72,0	1/1:1,23:24:57.19:790,57,0	0/0:31,0:31:90.29:0,90,1414	1/1:0,22:22:57.19:795,57,0	0/0:25,0:25:75.26:0,75,1195	0/0:32,0:32:96.31:0,96,1510	1/1:0,25:25:57.19:795,57,0	0/0:17,0:17:48.16:0,48,763	0/0:22,0:22:66.23:0,66,1052	0/0:10,0:10:30.10:0,30,479
chr10	6309931	.	TGGAATGGTCTCCTGAGC	T	16838.15	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=16.068;DP=576;FS=5.316;HRun=0;HaplotypeScore=275.6639;InbreedingCoeff=0.9988;MQ=94.86;MQ0=0;MQRankSum=-15.663;QD=111.51;ReadPosRankSum=4.397;VQSLOD=4.2712;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,117,9622	0/0:12,0:12:36.12:0,36,2751	0/0:25,0:25:72.25:0,72,4256	0/0:33,0:33:90.31:0,90,5985	0/0:23,0:23:69.24:0,69,5622	1/1:0,20:20:54.19:2680,54,0	1/1:1,12:13:33.11:1539,33,0	0/0:33,0:33:96.32:0,96,6588	1/1:1,9:10:24.08:1184,24,0	0/0:15,0:15:45.15:0,45,3559	0/0:19,0:19:57.20:0,57,4644	0/0:19,0:19:57.20:0,57,4308	0/0:20,0:20:60.21:0,60,4909	0/0:21,0:21:60.21:0,60,4944	1/1:1,15:16:42.14:2069,42,0	1/1:2,12:14:33.11:1638,33,0	1/1:3,9:12:21.07:946,21,0	0/0:24,0:24:72.25:0,72,5806	1/1:10,12:22:33.09:1512,33,0	1/1:1,18:19:51.17:2153,51,0	0/0:30,0:30:90.31:0,90,7193	1/1:0,13:13:33.11:1629,33,0	0/0:24,0:24:69.24:0,69,5675	0/0:20,0:20:60.21:0,60,4339	1/1:1,11:12:30.10:1489,30,0	0/0:29,0:29:87.30:0,87,6538	0/0:23,0:23:69.24:0,69,5289	0/0:15,0:15:39.13:0,39,3194
chr10	6310557	.	GC	G	7434.31	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=4.773;DP=607;FS=5.434;HRun=2;HaplotypeScore=66.8625;InbreedingCoeff=0.9973;MQ=81.75;MQ0=0;MQRankSum=-0.307;QD=34.90;ReadPosRankSum=1.878;VQSLOD=5.3525;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,111,1662	0/0:11,0:11:33.11:0,33,494	0/0:16,0:16:39.04:0,39,498	0/0:17,0:16:26.23:0,26,382	0/0:14,0:14:42.14:0,42,627	1/1:2,15:17:42.14:545,42,0	1/1:1,29:30:81.26:1051,81,0	0/0:33,0:33:66.93:0,67,505	1/1:1,24:25:72.19:915,72,0	0/0:32,0:32:96.32:0,96,1431	0/0:13,0:13:39.13:0,39,583	0/0:28,0:28:84.26:0,84,1219	0/0:14,0:14:42.14:0,42,626	0/0:31,0:31:93.31:0,93,1389	1/1:0,17:17:51.17:662,51,0	1/1:1,23:24:57.19:740,57,0	1/1:0,22:22:57.19:740,57,0	0/0:14,0:14:42.10:0,42,604	1/1:0,20:20:60.18:763,60,0	1/1:0,22:22:60.19:777,60,0	0/0:46,0:46:99:0,132,1954	1/1:0,17:17:48.16:620,48,0	0/0:22,0:22:66.22:0,66,980	0/0:15,0:15:45.15:0,45,674	1/1:1,18:19:48.16:623,48,0	0/0:17,0:17:45.79:0,46,283	0/0:28,0:27:82.82:0,83,551	0/0:5,0:5:14.91:0,15,125
chr10	6311482	.	CAAAA	C	1126.37	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=2.630;DP=524;FS=0.596;HRun=7;HaplotypeScore=127.7001;InbreedingCoeff=0.9616;MQ=61.95;MQ0=5;MQRankSum=-4.585;QD=21.66;ReadPosRankSum=0.158;VQSLOD=0.0936;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:78.11:0,78,1317	0/0:13,0:13:39.12:0,39,729	0/0:16,0:7:18.01:0,18,180	0/0:17,0:9:21.02:0,21,283	0/0:18,0:18:54.12:0,54,985	0/0:29,0:29:63.14:0,63,730	0/0:8,0:8:15.01:0,15,159	1/1:17,5:22:49.82:526,50,0	0/0:22,0:21:30.04:0,30,320	0/0:23,0:23:69.20:0,69,1281	0/0:14,0:14:42.12:0,42,777	0/0:19,0:19:54.12:0,54,926	0/0:17,0:17:50.95:0,51,886	0/0:19,0:19:48.12:0,48,791	0/0:21,0:20:57.01:0,57,647	0/0:20,0:20:53.99:0,54,658	0/0:17,0:17:45.74:0,46,475	0/0:37,0:37:70.15:0,70,1542	0/0:20,0:17:43.30:0,43,514	0/0:27,0:27:78.09:0,78,918	0/0:17,0:17:32.26:0,32,785	0/0:17,0:17:42.02:0,42,457	0/0:18,0:18:54.13:0,54,836	0/0:16,0:16:42.14:0,42,817	0/0:17,0:17:45.10:0,45,541	1/1:10,6:16:35.89:385,36,0	1/1:6,6:11:29.94:310,30,0	1/1:1,1:2:5.97:59,6,0
chr10	6311498	.	CAAACA	C	1101.48	PASS	AB=1.000;AC=12;AF=0.214;AN=56;BaseQRankSum=1.768;DP=509;FS=2.323;HRun=0;HaplotypeScore=139.0797;InbreedingCoeff=0.4840;MQ=54.92;MQ0=5;MQRankSum=-4.061;QD=9.41;ReadPosRankSum=-8.323;VQSLOD=0.1774;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:30:49.47:0,49,909	0/0:11,0:11:33.11:0,33,511	0/0:12,0:3:8.72:0,9,57	0/0:11,0:3:8.69:0,9,73	0/0:16,0:16:17.63:0,18,619	0/0:28,0:28:36.05:0,36,444	0/1:9,0:9:2.83:3,0,58	1/1:18,5:23:37.13:398,37,0	0/0:20,0:19:12.90:0,13,120	0/0:24,0:24:38.58:0,39,868	0/1:16,0:16:31.74:32,0,482	0/0:20,0:20:44.28:0,44,600	0/0:14,0:14:17.52:0,18,597	0/0:17,0:17:14.72:0,15,454	0/0:18,0:17:37.36:0,37,439	0/0:22,0:22:5.43:0,5,474	0/0:17,0:18:12.98:0,13,281	0/0:34,0:34:36.22:0,36,1074	0/1:17,0:13:48.86:49,0,199	0/0:28,0:28:7.59:0,8,533	0/1:20,0:20:10.18:10,0,493	0/0:20,0:20:5.84:0,6,266	0/0:15,0:15:14.48:0,14,511	0/0:16,0:16:17.49:0,17,565	0/0:17,0:17:32.73:0,33,330	1/1:12,6:18:39.52:442,40,0	1/1:6,6:11:21.69:280,22,0	1/1:1,1:2:3.01:50,3,0
chr10	6311500	.	AAC	A	2017.51	PASS	AB=1.000;AC=26;AF=0.464;AN=56;BaseQRankSum=4.724;DP=504;FS=0.798;HRun=0;HaplotypeScore=108.7843;InbreedingCoeff=0.6333;MQ=55.17;MQ0=5;MQRankSum=-2.008;QD=7.64;ReadPosRankSum=-0.805;VQSLOD=2.7394;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:30:64.45:0,64,294	0/0:11,0:11:31.24:0,31,163	0/0:12,0:3:2.25:0,2,21	0/1:12,0:4:14.81:15,0,64	0/0:19,0:19:40.20:0,40,226	1/1:26,2:28:43.32:262,43,0	1/1:8,1:9:12:87,12,0	0/1:23,0:22:44.53:84,0,45	1/1:19,0:18:14.06:66,14,0	0/0:23,0:23:61.52:0,62,402	0/0:15,0:15:41.90:0,42,215	0/0:18,0:18:18.64:0,19,210	0/0:14,0:14:35.41:0,35,203	0/0:15,0:15:32.05:0,32,170	1/1:18,0:17:25.17:208,25,0	1/1:19,3:22:36.10:373,36,0	1/1:17,1:18:36.13:251,36,0	0/0:34,0:34:59.44:0,59,466	1/1:18,0:14:3.44:124,3,0	1/1:26,1:27:32.54:268,33,0	0/0:18,0:18:48.10:0,48,250	1/1:18,1:19:42.13:244,42,0	0/0:14,0:14:28.41:0,28,163	0/0:16,0:16:39.64:0,40,202	1/1:17,0:17:17.48:123,17,0	0/1:19,0:19:38.46:62,0,38	0/1:12,0:11:25.46:44,0,25	1/1:3,0:3:3.31:15,3,0
chr10	6311501	.	AC	A	5454.06	PASS	AB=0.979;AC=39;AF=0.696;AN=56;BaseQRankSum=1.315;DP=488;FS=4.505;HRun=1;HaplotypeScore=86.2830;InbreedingCoeff=0.0586;MQ=55.53;MQ0=5;MQRankSum=-2.692;QD=12.51;ReadPosRankSum=4.387;VQSLOD=3.8446;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:29:19.96:25,0,20	0/1:12,0:12:15.28:16,0,15	0/0:11,0:3:5.45:0,5,26	0/1:11,1:4:22.27:22,0,50	0/1:19,0:19:6.25:6,0,26	1/1:2,25:27:51.07:623,51,0	1/1:1,8:9:14.99:169,15,0	1/1:19,0:18:26.18:127,26,0	1/1:0,18:17:15.05:206,15,0	0/0:23,0:23:35.32:0,35,219	0/1:16,0:16:11.15:11,0,48	0/1:18,0:18:30.71:31,0,47	0/1:13,1:14:24.79:78,0,25	0/1:14,1:15:21.67:73,0,22	1/1:16,3:18:46.75:588,47,0	1/1:16,7:23:56.18:657,56,0	1/1:11,6:17:47.34:562,47,0	0/1:32,1:33:42.70:43,0,162	1/1:11,6:13:27.89:314,28,0	1/1:14,12:26:66.36:774,66,0	0/0:18,0:18:1.16:0,1,41	1/1:3,15:18:46.77:522,47,0	0/1:13,0:13:3.90:4,0,32	0/1:16,0:16:9.12:12,0,9	1/1:1,15:16:30.57:416,31,0	1/1:16,0:16:17.98:100,18,0	1/1:11,0:10:17.42:65,17,0	1/1:2,0:2:3.07:10,3,0
chr10	6311502	.	CA	C	6264.09	PASS	AB=1.000;AC=47;AF=0.839;AN=56;BaseQRankSum=-1.111;DP=487;FS=7.076;HRun=11;HaplotypeScore=82.4086;InbreedingCoeff=0.2155;MQ=55.53;MQ0=5;MQRankSum=-1.196;QD=13.50;ReadPosRankSum=4.848;VQSLOD=4.9036;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,28:29:69.36:567,69,0	1/1:2,10:12:31.78:252,32,0	0/0:11,0:3:8.97:0,9,71	0/0:12,0:4:3.37:0,3,9	1/1:2,17:19:44.94:369,45,0	1/1:27,0:27:40.66:227,41,0	1/1:9,0:9:10.03:47,10,0	1/1:7,10:16:41.93:339,42,0	0/1:19,0:18:6.68:61,0,7	1/1:6,17:23:12.92:313,13,0	1/1:2,14:16:35.94:295,36,0	1/1:3,14:18:37.99:302,38,0	1/1:3,11:14:8.89:265,9,0	1/1:4,12:16:32.92:270,33,0	1/1:19,0:18:7.63:185,8,0	0/1:23,0:23:27.35:128,0,27	1/1:17,0:17:31.27:158,31,0	1/1:9,24:33:40.41:462,40,0	0/1:15,0:12:43.17:43,0,67	0/1:25,0:25:71.35:182,0,71	1/1:2,16:18:44.94:369,45,0	1/1:18,0:18:11.99:129,12,0	1/1:1,11:13:31.99:252,32,0	1/1:2,15:17:38.95:320,39,0	0/1:17,0:17:19.28:102,0,19	1/1:9,7:16:41.92:338,42,0	1/1:6,5:10:29.93:240,30,0	1/1:2,0:2:5.98:48,6,0
chr10	6311626	.	GGTGTGT	G	3115.91	PASS	AC=22;AF=0.407;AN=54;BaseQRankSum=1.675;DP=470;FS=11.853;HRun=0;HaplotypeScore=112.7128;InbreedingCoeff=0.7756;MQ=60.41;MQ0=20;MQRankSum=-3.623;QD=15.58;ReadPosRankSum=1.877;VQSLOD=2.2615;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:18.46:0,18,121	0/0:4,0:2:0:0,0,0	./.	0/0:27,0:20:2.67:0,3,101	0/0:16,0:15:0.47:0,0,1	1/1:11,7:19:28.13:380,28,0	1/1:15,7:21:21.72:270,22,0	0/0:21,0:19:15:0,15,343	1/1:14,4:20:27.60:469,28,0	0/0:20,0:17:18.91:0,19,367	0/0:18,0:17:6.02:0,6,74	0/0:11,0:10:8.70:0,9,92	0/0:12,0:11:4.32:0,4,73	0/0:14,0:14:3.48:0,3,48	1/1:8,4:13:18.43:266,18,0	1/1:9,7:14:36.05:573,36,0	1/1:14,4:13:15.03:272,15,0	0/0:17,0:16:27.36:0,27,385	1/1:23,2:24:24.03:375,24,0	1/1:17,6:25:18.56:287,19,0	0/0:24,0:19:8.93:0,9,63	1/1:10,3:13:15.05:239,15,0	0/0:11,0:11:0:0,0,1	1/1:14,0:15:0.40:1,0,0	1/1:6,5:11:15.04:172,15,0	0/0:14,0:13:15.04:0,15,370	0/0:8,0:8:12.04:0,12,331	0/0:10,0:12:21.02:0,21,318
chr10	6311659	.	GTATGT	G	1106.39	PASS	AB=0.972;AC=31;AF=0.596;AN=52;BaseQRankSum=6.345;DP=493;FS=19.246;HRun=0;HaplotypeScore=121.0848;InbreedingCoeff=-0.0720;MQ=33.43;MQ0=49;MQRankSum=-2.800;QD=2.69;ReadPosRankSum=1.271;VQSLOD=0.9274;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:5:1.69:21,2,0	0/0:4,0:2:2.60:0,3,11	./.	./.	1/1:8,5:12:5.59:109,6,0	0/1:24,0:22:18.39:18,0,64	0/1:29,0:25:5.58:6,0,69	0/0:31,0:22:12.91:0,13,869	1/1:16,0:16:11.95:54,12,0	0/1:21,4:18:99:241,0,457	1/1:14,3:14:7.27:101,7,0	0/1:15,0:8:63.73:64,0,74	0/1:14,0:11:45.59:46,0,97	0/1:13,0:12:36.12:36,0,72	1/1:14,0:13:13.48:102,13,0	0/1:20,0:16:0.16:67,0,0	1/1:29,0:20:7.02:22,7,0	0/1:21,0:15:99:133,0,127	0/1:22,0:13:67.18:67,0,224	1/1:24,0:21:5.85:58,6,0	1/1:26,0:15:3.38:20,3,0	0/1:15,0:13:2.38:7,0,2	0/1:10,4:11:0.36:0,0,1	0/0:29,0:25:7.50:0,7,55	1/1:13,0:11:1.98:5,2,0	0/1:21,0:12:51.36:51,0,378	0/0:11,0:10:21.60:0,22,271	0/1:11,0:8:26.84:27,0,48
chr10	6311664	.	TTGTGTGTG	T	776.61	PASS	AB=0.750;AC=19;AF=0.365;AN=52;BaseQRankSum=1.789;DP=504;FS=13.011;HRun=0;HaplotypeScore=140.6831;InbreedingCoeff=0.6418;MQ=33.09;MQ0=50;MQRankSum=-1.418;QD=3.68;ReadPosRankSum=-1.365;VQSLOD=1.8347;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:3:0:0,0,0	0/0:3,0:2:3.01:0,3,73	./.	./.	0/0:12,0:13:0:0,0,1	1/1:16,7:22:11.97:153,12,0	1/1:22,7:25:11.38:142,11,0	0/0:33,0:24:31.65:0,32,542	1/1:10,7:17:3.29:20,3,0	0/0:28,0:21:34.48:0,34,555	0/0:15,0:12:0:0,0,2	0/0:14,0:9:12:0,12,281	0/0:10,0:11:8.86:0,9,289	0/0:13,0:14:15.77:0,16,410	1/1:8,7:16:17.24:237,17,0	0/1:14,7:19:0.78:71,0,1	1/1:19,9:21:5.87:41,6,0	0/0:15,0:14:11.44:0,11,192	1/1:19,0:11:6.02:136,6,0	1/1:18,6:21:8.90:60,9,0	0/0:28,0:18:9.95:0,10,165	1/1:11,0:11:2.63:20,3,0	0/0:14,0:12:0:0,0,1	0/0:24,0:24:12.19:0,12,236	1/1:9,5:12:10.15:62,10,0	0/0:21,0:13:21.33:0,21,311	0/0:11,0:9:4.37:0,4,54	0/0:11,0:8:6.02:0,6,83
chr10	6312468	.	GCAGA	G	2737.88	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=4.801;DP=594;FS=12.661;HRun=0;HaplotypeScore=105.8878;InbreedingCoeff=0.9642;MQ=75.54;MQ0=5;MQRankSum=-0.413;QD=30.76;ReadPosRankSum=4.952;VQSLOD=2.5545;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:84.29:0,84,1991	0/0:14,0:14:42.14:0,42,1006	0/0:25,0:21:27.06:0,27,525	0/0:31,0:29:47.85:0,48,964	0/0:27,0:27:60.21:0,60,1438	0/0:12,0:12:27.09:0,27,635	0/0:12,0:12:24.08:0,24,590	0/0:27,0:27:57.18:0,57,1310	0/0:23,0:23:54.19:0,54,1328	0/0:35,0:35:90.30:0,90,2129	0/0:23,1:24:7.46:0,7,1271	1/1:5,12:16:33.11:547,33,0	1/1:2,20:22:45.15:746,45,0	1/1:3,14:16:30.10:497,30,0	0/0:8,0:8:18.06:0,18,438	0/0:5,0:5:9.03:0,9,221	0/0:33,1:34:37.53:0,38,1914	0/0:10,0:10:24.08:0,24,548	0/0:15,0:14:33.11:0,33,777	0/0:23,0:23:51.18:0,51,1254	0/0:23,0:23:63.22:0,63,1461	0/0:7,0:7:21.07:0,21,492	1/1:3,11:15:36.12:575,36,0	1/1:3,15:18:33.11:547,33,0	0/0:29,0:29:78.27:0,78,1903	0/0:39,0:39:87.30:0,87,2108	0/0:30,0:30:69.22:0,69,1644	0/0:17,0:17:45.12:0,45,1053
chr10	6312653	.	A	AACAT	5594.58	PASS	AB=0.788;AC=22;AF=0.393;AN=56;BaseQRankSum=-8.408;DP=514;FS=0.470;HRun=0;HaplotypeScore=82.3400;InbreedingCoeff=0.7430;MQ=64.25;MQ0=3;MQRankSum=0.673;QD=26.90;ReadPosRankSum=2.051;VQSLOD=4.1891;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:34:16.04:151,16,0	0/0:16,0:16:24.08:0,24,377	0/0:21,0:11:4.36:0,4,61	0/0:24,0:11:3.48:0,3,50	0/1:17,1:18:39.03:39,0,413	1/1:4,9:13:18.06:433,18,0	1/1:4,2:6:6.02:144,6,0	0/0:46,0:45:54.13:0,54,810	0/1:7,10:16:21.07:536,0,21	0/0:29,0:29:72.22:0,72,1130	0/0:19,0:20:51.15:0,51,775	0/0:10,0:10:21.07:0,21,336	0/0:11,0:11:18.02:0,18,261	0/0:11,0:11:24.08:0,24,385	1/1:4,6:12:9.03:198,9,0	1/1:2,5:7:2.93:72,3,0	1/1:2,17:19:36.12:866,36,0	0/0:15,0:15:39.13:0,39,615	1/1:12,5:18:21.07:434,21,0	1/1:6,20:27:57.20:1288,57,0	0/0:7,0:7:15.05:0,15,241	1/1:1,6:7:15.05:294,15,0	0/0:13,0:13:18.05:0,18,266	0/0:4,0:4:12.03:0,12,169	1/1:9,21:30:48.16:1139,48,0	0/0:31,0:31:75.26:0,75,1197	0/0:33,0:33:69.22:0,69,1076	0/0:15,0:15:36.08:0,36,529
chr10	6313495	.	AT	A	3676.02	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=11.425;DP=509;FS=0.378;HRun=9;HaplotypeScore=53.8211;InbreedingCoeff=0.9843;MQ=71.41;MQ0=0;MQRankSum=0.823;QD=22.98;ReadPosRankSum=2.092;VQSLOD=4.4551;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:87.22:0,87,981	0/0:12,0:12:27.08:0,27,312	0/0:10,0:9:7.44:0,7,101	0/0:18,0:16:37.45:0,37,363	0/0:30,0:30:75.21:0,75,857	1/1:0,12:12:33.02:302,33,0	1/1:2,12:14:33.02:302,33,0	0/0:33,1:34:56.82:0,57,907	1/1:2,6:8:15.01:137,15,0	0/0:24,0:24:69.20:0,69,788	0/0:29,0:29:72.21:0,72,823	0/0:15,0:15:42.10:0,42,468	0/0:14,0:14:33.10:0,33,381	0/0:20,1:21:23.69:0,24,527	1/1:2,18:20:51.02:467,51,0	1/1:2,10:12:33.01:301,33,0	1/1:2,15:17:45.02:412,45,0	0/0:24,0:24:63.19:0,63,727	1/1:2,20:22:60.03:549,60,0	1/1:1,14:15:29.98:273,30,0	0/0:14,0:14:39.12:0,39,450	1/1:0,16:16:45.02:412,45,0	0/0:8,0:8:21.03:0,21,229	0/0:11,0:11:30.06:0,30,325	1/1:4,20:24:57.02:522,57,0	0/0:19,0:19:51.14:0,51,581	0/0:20,0:20:54.13:0,54,602	0/0:13,0:13:30.09:0,30,346
chr10	6315203	.	CAA	C	6042.38	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=20.200;DP=704;FS=26.761;HRun=3;HaplotypeScore=146.4816;InbreedingCoeff=1.0000;MQ=81.12;MQ0=1;MQRankSum=-19.380;QD=25.50;ReadPosRankSum=-0.212;VQSLOD=2.2919;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,126,2361	0/0:13,0:13:39.13:0,39,753	0/0:26,0:26:69.24:0,69,1272	0/0:20,0:20:60.16:0,60,991	0/0:28,0:28:84.28:0,84,1592	1/1:1,23:24:66.07:650,66,0	1/1:3,21:25:65.92:605,66,0	0/0:34,0:34:99:0,102,1966	1/1:3,25:30:84.06:807,84,0	0/0:33,0:33:96.33:0,96,1841	0/0:21,0:21:63.22:0,63,1217	0/0:16,0:16:48.16:0,48,928	0/0:34,0:34:99:0,99,1890	0/0:24,0:24:72.25:0,72,1391	1/1:2,27:31:83.82:759,84,0	1/1:2,19:21:60.03:576,60,0	1/1:5,15:20:44.76:421,45,0	0/0:25,0:25:72.25:0,72,1372	1/1:2,17:19:51.11:522,51,0	1/1:2,24:27:74.94:705,75,0	0/0:25,0:25:72.25:0,72,1391	1/1:4,22:26:74.79:672,75,0	0/0:19,0:19:57.18:0,57,1067	0/0:38,0:38:99:0,111,2145	1/1:1,12:13:35.94:326,36,0	0/0:21,0:21:63.22:0,63,1217	0/0:34,0:34:99:0,102,1970	0/0:14,0:14:39.12:0,39,705
chr10	6315207	.	TGACC	T	9583.59	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=20.228;DP=684;FS=16.127;HRun=0;HaplotypeScore=160.8779;InbreedingCoeff=1.0000;MQ=83.60;MQ0=1;MQRankSum=-19.601;QD=42.98;ReadPosRankSum=-0.149;VQSLOD=4.2863;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,123,3491	0/0:12,0:12:36.12:0,36,1043	0/0:27,0:27:72.25:0,72,2076	0/0:22,0:22:66.23:0,66,1813	0/0:28,0:28:84.29:0,84,2424	1/1:0,23:23:66.22:1023,66,0	1/1:1,21:22:66.11:938,66,0	0/0:33,0:33:96.31:0,96,2564	1/1:2,25:27:78.26:1194,78,0	0/0:33,0:33:99:0,99,2839	0/0:21,0:21:63.21:0,63,1735	0/0:17,0:17:51.18:0,51,1476	0/0:32,0:32:96.33:0,96,2774	0/0:24,0:24:72.23:0,72,2023	1/1:1,27:28:79.20:1166,79,0	1/1:0,19:19:57.19:881,57,0	1/1:1,15:16:42.14:635,42,0	0/0:23,0:23:69.24:0,69,1921	1/1:2,18:19:57.19:915,57,0	1/1:3,24:27:81.20:1175,81,0	0/0:24,0:24:72.25:0,72,2034	1/1:2,24:26:69.49:995,69,0	0/0:17,0:17:51.18:0,51,1426	0/0:38,0:38:99:0,114,3121	1/1:3,12:15:45.14:661,45,0	0/0:21,0:21:63.22:0,63,1795	0/0:33,0:33:99:0,99,2839	0/0:15,0:15:42.14:0,42,1201
chr10	6315211	.	C	CAT	3918.89	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=20.246;DP=700;FS=9.370;HRun=0;HaplotypeScore=160.4470;InbreedingCoeff=1.0000;MQ=83.78;MQ0=0;MQRankSum=-20.018;QD=16.33;ReadPosRankSum=-0.111;VQSLOD=3.0945;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,120,1935	0/0:12,0:12:36.12:0,36,584	0/0:29,0:29:75.23:0,75,1222	0/0:22,0:22:66.22:0,66,1055	0/0:30,0:30:90.31:0,90,1468	1/1:24,0:24:55.46:378,55,0	1/1:23,0:23:59.32:530,59,0	0/0:29,0:29:84.29:0,84,1371	1/1:28,0:28:62.22:353,62,0	0/0:34,0:34:99:0,102,1645	0/0:22,0:22:66.21:0,66,1054	0/0:18,0:18:54.17:0,54,857	0/0:34,0:34:99:0,99,1589	0/0:25,0:25:72.23:0,72,1148	1/1:32,0:32:70.21:561,70,0	1/1:22,0:22:51.71:321,52,0	1/1:19,0:19:40.41:181,40,0	0/0:23,0:23:66.16:0,66,1022	1/1:22,1:23:47.72:260,48,0	1/1:28,2:30:70.82:621,71,0	0/0:24,0:24:69.24:0,69,1126	1/1:24,0:24:48.35:292,48,0	0/0:15,0:15:45.15:0,45,731	0/0:35,0:35:99:0,105,1597	1/1:12,3:15:38.32:421,38,0	0/0:20,0:20:60.20:0,60,978	0/0:33,0:33:96.33:0,96,1566	0/0:14,0:14:42.14:0,42,685
chr10	6316048	.	A	AGTG	3687.69	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=13.886;DP=625;FS=0.000;HRun=0;HaplotypeScore=183.2360;InbreedingCoeff=0.9507;MQ=89.29;MQ0=0;MQRankSum=-13.296;QD=45.53;ReadPosRankSum=0.965;VQSLOD=4.7606;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,38:39:99:1621,104,0	0/0:13,0:13:36.12:0,36,668	0/0:27,0:27:57.73:0,58,1283	0/0:27,0:27:80.98:0,81,1302	0/0:23,0:23:69.18:0,69,1205	0/0:20,0:20:57.19:0,57,1034	0/0:26,0:26:78.20:0,78,1338	1/1:0,5:5:15.05:273,15,0	0/0:24,0:24:69.24:0,69,1287	0/0:23,0:23:66.22:0,66,1203	0/0:5,0:5:15.05:0,15,280	0/0:24,0:24:72.25:0,72,1332	0/0:34,0:34:99:0,99,1829	0/0:31,0:31:93.30:0,93,1674	0/0:27,0:27:81.28:0,81,1511	0/0:26,0:26:78.27:0,78,1448	0/0:26,0:26:78.27:0,78,1441	0/0:22,0:22:63.17:0,63,1130	0/0:19,0:19:51.15:0,51,881	0/0:20,0:20:60.21:0,60,1119	0/0:42,0:42:99:0,120,2213	0/0:21,0:21:60.21:0,60,1108	0/0:26,0:26:78.27:0,78,1448	0/0:21,0:21:60.21:0,60,1119	0/0:17,0:17:51.16:0,51,914	1/1:1,14:15:42.14:748,42,0	1/1:0,19:20:60.20:992,60,0	1/1:1,1:2:3.01:54,3,0
chr10	6316050	.	C	CCTG	4663.41	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=14.746;DP=647;FS=1.869;HRun=0;HaplotypeScore=192.3583;InbreedingCoeff=0.9564;MQ=88.25;MQ0=0;MQRankSum=-14.408;QD=43.99;ReadPosRankSum=0.062;VQSLOD=5.8246;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,38:46:94.73:1788,95,0	0/0:13,0:13:39.13:0,39,719	0/0:25,0:25:71.59:0,72,1186	0/0:29,0:29:77.38:0,77,1258	0/0:21,0:21:60.21:0,60,1118	0/0:20,0:20:57.20:0,57,1062	0/0:24,0:24:69.24:0,69,1286	1/1:10,5:15:36.12:653,36,0	0/0:24,0:24:69.24:0,69,1283	0/0:23,0:23:66.21:0,66,1170	0/0:7,0:7:18.05:0,18,305	0/0:24,0:24:72.25:0,72,1340	0/0:34,0:34:99:0,99,1777	0/0:31,0:31:90.29:0,90,1638	0/0:28,0:28:84.27:0,84,1535	0/0:25,0:25:75.26:0,75,1389	0/0:27,0:27:81.26:0,81,1478	0/0:22,0:22:66.23:0,66,1212	0/0:18,0:18:48.16:0,48,894	0/0:20,0:20:60.21:0,60,1111	0/0:42,0:42:99:0,123,2251	0/0:22,0:22:63.20:0,63,1134	0/0:26,0:26:78.27:0,78,1450	0/0:21,0:21:60.19:0,60,1078	0/0:15,0:15:45.14:0,45,808	1/1:8,14:22:60.15:1018,60,0	1/1:2,19:22:66.22:1147,66,0	1/1:0,1:1:3.01:57,3,0
chr10	6316904	.	CTG	C	14889.84	PASS	AB=0.574;AC=29;AF=0.518;AN=56;BaseQRankSum=16.763;DP=770;FS=1.890;HRun=0;HaplotypeScore=98.7999;InbreedingCoeff=0.9282;MQ=81.69;MQ0=1;MQRankSum=-2.914;QD=35.28;ReadPosRankSum=1.959;VQSLOD=7.2998;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,46:51:99:1849,132,0	0/0:19,0:19:51.17:0,51,889	0/0:29,0:29:71.82:0,72,1180	0/0:25,0:25:60.01:0,60,921	0/0:30,0:30:87.28:0,87,1527	1/1:1,26:27:66.22:924,66,0	1/1:1,21:22:57.19:798,57,0	1/1:2,28:30:81.23:1080,81,0	1/1:1,29:30:81.27:1134,81,0	0/0:39,0:39:99:0,114,2050	0/0:19,0:19:54.18:0,54,948	0/0:31,0:31:87.28:0,87,1526	0/0:37,0:37:99:0,102,1814	0/0:26,0:26:75.24:0,75,1321	1/1:2,22:24:60.20:840,60,0	1/1:1,22:23:63.21:882,63,0	1/1:1,31:32:75.25:1050,75,0	0/0:22,0:22:60.17:0,60,1037	1/1:1,32:33:93.26:1263,93,0	1/1:3,29:32:78.26:1092,78,0	0/0:29,0:29:87.30:0,87,1567	1/1:1,14:15:39.13:546,39,0	0/0:20,0:20:60.21:0,60,1075	0/0:22,0:22:63.22:0,63,1129	1/1:1,25:26:66.22:924,66,0	0/1:8,23:31:99:784,0,192	1/1:1,36:36:99:1386,99,0	1/1:0,9:9:24.08:336,24,0
chr10	6317200	.	C	CAG	12102.36	PASS	AB=0.648;AC=27;AF=0.482;AN=56;BaseQRankSum=19.091;DP=680;FS=0.279;HRun=0;HaplotypeScore=179.0130;InbreedingCoeff=0.7998;MQ=81.80;MQ0=0;MQRankSum=-19.890;QD=33.62;ReadPosRankSum=1.337;VQSLOD=5.8851;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,23:29:35.37:905,35,0	0/0:15,0:15:45.11:0,45,683	0/0:26,0:26:71.51:0,72,1047	0/0:23,0:23:59.20:0,59,816	0/0:32,0:32:96.33:0,96,1563	1/1:4,17:21:35.73:757,36,0	1/1:7,11:18:29.23:650,29,0	1/1:10,23:33:32.57:1187,33,0	1/1:4,23:27:31.82:948,32,0	0/0:29,0:29:87.29:0,87,1398	0/0:21,0:21:60.16:0,60,925	0/0:32,0:32:96.33:0,96,1565	0/0:22,0:22:66.20:0,66,1046	0/0:19,0:19:54.18:0,54,881	1/1:7,28:35:60.61:1313,61,0	1/1:5,12:17:20.90:583,21,0	0/1:12,13:25:50.40:571,0,50	0/0:20,0:20:57.19:0,57,918	0/1:8,8:16:5.30:523,0,5	1/1:8,27:35:31.19:1159,31,0	0/0:33,0:33:99:0,99,1566	1/1:4,19:23:69.20:913,69,0	0/0:24,0:24:69.24:0,69,1122	0/0:24,0:24:72.24:0,72,1155	1/1:8,16:24:65.84:862,66,0	0/1:13,21:34:99:878,0,151	1/1:4,13:17:30.97:619,31,0	1/1:3,3:6:18.05:235,18,0
chr10	6317201	.	T	TTACC	19676.72	PASS	AB=0.629;AC=28;AF=0.500;AN=56;BaseQRankSum=16.998;DP=683;FS=5.578;HRun=0;HaplotypeScore=176.7219;InbreedingCoeff=0.8527;MQ=81.71;MQ0=0;MQRankSum=-19.275;QD=54.21;ReadPosRankSum=-0.543;VQSLOD=5.1068;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,22:29:75.24:1521,75,0	0/0:14,0:14:42.13:0,42,804	0/0:26,0:26:69.23:0,69,1279	0/0:23,0:23:62.24:0,62,1049	0/0:32,0:32:96.33:0,96,1911	1/1:4,17:21:63.22:1333,63,0	1/1:7,10:18:6.47:858,6,0	1/1:11,23:34:77.04:1812,77,0	1/1:4,23:27:81.22:1631,81,0	0/0:30,0:30:87.29:0,87,1685	0/0:21,0:21:63.19:0,63,1149	0/0:32,0:32:96.33:0,96,1905	0/0:22,0:22:63.20:0,63,1222	0/0:19,0:19:57.18:0,57,1102	1/1:8,28:36:99:2201,105,0	1/1:4,12:16:48.14:956,48,0	0/1:12,13:25:2.45:968,0,2	0/0:20,0:20:60.13:0,60,1073	1/1:10,8:18:38.02:820,38,0	1/1:8,26:35:89.12:1996,89,0	0/0:33,0:33:99:0,99,1908	1/1:4,18:23:46.15:1300,46,0	0/0:24,0:24:69.24:0,69,1367	0/0:24,0:24:72.23:0,72,1385	1/1:7,16:23:54.73:1243,55,0	0/1:11,22:33:20.30:1765,0,20	1/1:6,13:19:48.12:971,48,0	1/1:3,3:6:4.78:301,5,0
chr10	6320200	.	AAG	A	10426.23	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=14.796;DP=542;FS=6.240;HRun=0;HaplotypeScore=123.5755;InbreedingCoeff=0.9908;MQ=78.48;MQ0=0;MQRankSum=-6.185;QD=35.71;ReadPosRankSum=2.051;VQSLOD=7.0820;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,18:19:42.14:592,42,0	0/0:6,0:6:18.05:0,18,290	0/0:19,0:19:47.84:0,48,723	0/0:17,0:17:47.99:0,48,710	0/0:24,0:24:61.44:0,61,1047	1/1:1,19:20:51.17:719,51,0	1/1:2,16:18:45.15:635,45,0	1/1:3,30:33:87.25:1174,87,0	1/1:0,14:14:39.13:549,39,0	0/0:20,0:20:51.17:0,51,912	0/0:18,0:18:51.16:0,51,878	0/0:14,0:14:42.12:0,42,688	0/0:22,0:22:60.16:0,60,973	0/0:19,0:19:54.17:0,54,938	1/1:1,20:21:57.15:774,57,0	1/1:2,16:18:42.14:593,42,0	1/1:1,40:41:99:1396,99,0	0/0:18,0:18:54.18:0,54,946	1/1:2,15:17:45.13:603,45,0	1/1:1,15:16:45.11:611,45,0	0/0:21,0:21:63.22:0,63,1124	1/1:0,13:13:33.11:465,33,0	0/0:18,0:18:54.16:0,54,908	0/0:34,0:34:99:0,99,1666	1/1:0,15:15:45.15:634,45,0	1/1:1,17:18:54.06:667,54,0	1/1:1,24:25:63.21:888,63,0	1/1:0,4:4:9.03:127,9,0
chr10	6321906	.	A	AAGGG	14084.04	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-0.576;DP=709;FS=5.978;HRun=0;HaplotypeScore=141.7380;InbreedingCoeff=0.9999;MQ=87.85;MQ0=0;MQRankSum=-13.852;QD=59.43;ReadPosRankSum=1.206;VQSLOD=6.3941;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,151,2768	0/0:15,0:15:42.62:0,43,784	0/0:37,0:37:99:0,102,1756	0/0:23,0:23:63.13:0,63,1003	0/0:25,0:25:75.24:0,75,1369	1/1:1,24:26:57.20:1514,57,0	1/1:4,12:16:39.13:989,39,0	0/0:35,0:35:96.31:0,96,1696	1/1:3,20:23:60.21:1597,60,0	0/0:25,0:25:69.23:0,69,1246	0/0:24,0:24:69.24:0,69,1267	0/0:30,0:30:84.27:0,84,1495	0/0:27,0:27:81.23:0,81,1427	0/0:26,0:26:66.23:0,66,1206	1/1:3,21:25:54.18:1395,54,0	1/1:4,17:21:57.19:1392,57,0	1/1:7,21:28:66.23:1705,66,0	0/0:13,0:13:36.07:0,36,605	1/1:8,18:26:69.24:1743,69,0	1/1:6,25:31:57.19:1469,57,0	0/0:20,0:20:57.19:0,57,1033	1/1:3,17:19:39.13:1025,39,0	0/0:22,0:22:57.20:0,57,1063	0/0:15,0:15:45.15:0,45,840	1/1:3,17:20:48.16:1253,48,0	0/0:33,0:33:87.30:0,87,1618	0/0:35,0:35:99:0,99,1832	0/0:14,0:14:42.14:0,42,784
chr10	6322109	.	C	CT	9463.59	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=5.583;DP=617;FS=2.728;HRun=0;HaplotypeScore=84.1331;InbreedingCoeff=0.9951;MQ=76.42;MQ0=0;MQRankSum=-9.467;QD=43.21;ReadPosRankSum=-1.430;VQSLOD=4.7283;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,120,1640	0/0:9,0:9:24.08:0,24,335	0/0:24,0:23:54.14:0,54,693	0/0:21,0:19:47.25:0,47,639	0/0:19,0:19:57.19:0,57,792	1/1:4,13:17:45.14:687,45,0	1/1:3,19:22:60.19:931,60,0	0/0:26,0:26:78.21:0,78,1053	1/1:2,27:29:87.28:1344,87,0	0/0:20,0:20:57.17:0,57,754	0/0:14,0:14:42.11:0,42,548	0/0:18,0:18:54.16:0,54,723	0/0:29,0:29:87.26:0,87,1181	0/0:22,0:22:66.21:0,66,906	1/1:4,32:36:99:1625,108,0	1/1:4,15:19:54.11:795,54,0	1/1:4,18:22:57.17:867,57,0	0/0:25,0:24:72.23:0,72,990	1/1:5,21:26:75.18:1097,75,0	1/1:2,13:15:42.13:637,42,0	0/0:26,0:26:78.26:0,78,1090	1/1:2,15:18:54.18:834,54,0	0/0:20,0:20:48.09:0,48,600	0/0:26,0:26:78.26:0,78,1080	1/1:2,13:14:42.13:647,42,0	0/0:26,0:26:78.24:0,78,1045	0/0:29,0:29:84.26:0,84,1151	0/0:4,0:4:12.04:0,12,168
chr10	6322138	.	AC	A	8241.68	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=14.987;DP=724;FS=0.000;HRun=2;HaplotypeScore=96.5179;InbreedingCoeff=0.9997;MQ=78.90;MQ0=0;MQRankSum=-6.274;QD=35.68;ReadPosRankSum=2.083;VQSLOD=5.0551;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,153,2384	0/0:17,0:17:51.17:0,51,814	0/0:26,0:26:69.23:0,69,1065	0/0:23,0:22:66.22:0,66,1035	0/0:29,0:29:87.28:0,87,1359	1/1:1,24:25:66.22:920,66,0	1/1:0,27:27:60.20:838,60,0	0/0:24,0:24:72.20:0,72,1115	1/1:0,27:27:66.22:922,66,0	0/0:31,0:31:93.32:0,93,1483	0/0:20,0:20:54.18:0,54,855	0/0:20,0:20:60.19:0,60,930	0/0:35,0:35:99:0,105,1667	0/0:23,0:23:69.22:0,69,1071	1/1:0,31:31:84.28:1173,84,0	1/1:0,18:18:54.18:754,54,0	1/1:1,21:22:51.15:694,51,0	0/0:24,0:23:69.24:0,69,1102	1/1:0,22:22:63.20:864,63,0	1/1:0,21:21:48.16:671,48,0	0/0:43,0:43:99:0,123,1930	1/1:1,19:20:51.16:694,51,0	0/0:19,0:19:54.18:0,54,861	0/0:39,0:39:99:0,114,1782	1/1:1,17:18:51.17:711,51,0	0/0:32,0:32:96.33:0,96,1524	0/0:26,0:26:78.22:0,78,1169	0/0:8,0:8:24.08:0,24,383
chr10	6322820	.	TTTTC	T	6891.17	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=16.627;DP=645;FS=2.544;HRun=0;HaplotypeScore=135.5201;InbreedingCoeff=0.9666;MQ=57.55;MQ0=5;MQRankSum=-13.661;QD=31.04;ReadPosRankSum=1.225;VQSLOD=4.5797;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:36:75.51:0,76,2170	0/0:7,0:7:21.07:0,21,475	0/0:23,0:9:2.88:0,3,151	0/0:29,0:18:30.66:0,31,695	0/0:38,0:38:99:0,105,2508	1/1:4,19:23:27.09:461,27,0	1/1:2,10:12:21.07:356,21,0	0/0:29,0:28:63.21:0,63,1404	1/1:3,19:22:42.10:689,42,0	0/0:25,0:25:69.22:0,69,1577	0/0:28,0:28:72.25:0,72,1676	0/0:18,0:18:42.13:0,42,847	0/0:22,0:22:60.18:0,60,1355	0/0:18,0:18:48.16:0,48,1152	1/1:1,24:25:42.14:719,42,0	1/1:3,23:26:48.16:793,48,0	1/1:2,11:13:21.07:356,21,0	0/0:24,0:24:66.18:0,66,1462	1/1:5,16:20:11.60:664,12,0	1/1:5,24:29:72:1033,72,0	0/0:10,0:10:30.10:0,30,748	1/1:4,16:20:47.94:650,48,0	0/0:29,0:29:81.25:0,81,1887	0/0:24,0:25:61.74:0,62,1275	1/1:4,27:31:69.24:1171,69,0	0/0:25,0:25:69.24:0,69,1639	0/0:18,0:18:51.16:0,51,1221	0/0:19,0:19:54.18:0,54,1267
chr10	6323767	.	A	AACACACAC	6861.41	PASS	AB=1.000;AC=43;AF=0.796;AN=54;BaseQRankSum=-4.610;DP=666;FS=7.755;HRun=0;HaplotypeScore=222.7572;InbreedingCoeff=0.8001;MQ=64.30;MQ0=13;MQRankSum=0.124;QD=12.66;ReadPosRankSum=-0.771;VQSLOD=2.8848;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:33,13:52:6.02:246,6,0	1/1:6,0:6:9.02:185,9,0	./.	0/1:37,0:25:1.34:1,0,34	1/1:25,0:23:11.99:118,12,0	1/1:15,0:15:9.01:152,9,0	1/1:33,0:33:14.98:187,15,0	1/1:25,0:25:24.44:409,24,0	1/1:21,0:20:8.79:72,9,0	1/1:28,0:28:49.82:756,50,0	1/1:20,0:23:7.51:244,8,0	0/0:28,0:27:22.60:0,23,306	0/0:13,0:13:16.61:0,17,269	0/0:11,0:11:21.07:0,21,345	1/1:21,0:21:14.98:125,15,0	1/1:19,0:23:20.27:433,20,0	1/1:25,0:29:32.88:640,33,0	1/1:19,0:18:20.25:331,20,0	1/1:16,0:14:9.86:203,10,0	1/1:19,0:20:11.98:162,12,0	1/1:17,0:22:11.98:216,12,0	1/1:28,0:29:21:318,21,0	0/0:15,0:15:6.02:0,6,105	0/0:28,0:28:27:0,27,424	1/1:41,0:42:21.04:380,21,0	1/1:24,0:24:36.86:844,37,0	1/1:17,0:17:23.53:438,24,0	1/1:7,0:7:18.02:402,18,0
chr10	6323795	.	CACACAT	C	2081.40	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=1.085;DP=728;FS=9.629;HRun=0;HaplotypeScore=188.7298;InbreedingCoeff=0.2238;MQ=51.85;MQ0=21;MQRankSum=-0.684;QD=5.64;ReadPosRankSum=-2.836;VQSLOD=1.3448;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:29.92:0,30,453	0/0:11,0:11:23.92:0,24,304	0/0:34,0:14:25.78:0,26,313	0/0:36,0:13:23.81:0,24,253	0/0:23,0:21:7.54:0,8,363	0/1:18,0:18:81.18:98,0,81	0/1:46,0:42:51.90:319,0,52	0/0:24,0:24:64.32:0,64,942	0/1:19,0:18:41.26:122,0,41	0/0:31,0:30:49.86:0,50,1284	0/0:26,0:26:23.93:0,24,371	1/1:36,1:36:19.86:143,20,0	1/1:19,2:21:22.37:229,22,0	1/1:21,1:22:24.47:382,24,0	0/1:21,0:21:68.34:68,0,214	0/0:20,0:20:17.94:0,18,330	0/1:35,0:35:99:127,0,236	0/0:21,0:20:3.10:0,3,737	0/1:18,0:16:98.96:189,0,99	0/1:17,0:17:61.49:137,0,61	0/0:34,0:33:24.96:0,25,425	0/1:26,0:26:86.12:86,0,260	1/1:18,0:18:4.80:22,5,0	1/1:30,3:33:25.50:185,26,0	0/1:38,0:38:99:159,0,191	0/0:25,0:25:16.58:0,17,939	0/0:20,0:20:34.44:0,34,586	0/0:11,0:10:24.52:0,25,446
chr10	6323797	.	CACAT	C	3663.37	PASS	AB=1.000;AC=24;AF=0.429;AN=56;BaseQRankSum=-0.702;DP=730;FS=5.499;HRun=0;HaplotypeScore=169.4405;InbreedingCoeff=0.2138;MQ=56.06;MQ0=21;MQRankSum=-0.336;QD=8.20;ReadPosRankSum=-3.026;VQSLOD=2.2759;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:29.92:0,30,378	0/0:11,0:11:23.50:0,24,231	0/0:36,0:17:26.48:0,26,355	0/0:36,0:14:9.15:0,9,242	0/0:24,0:22:7.50:0,7,268	0/1:19,0:19:22.74:140,0,23	1/1:49,0:45:44.27:500,44,0	0/0:24,0:24:59.21:0,59,741	1/1:20,0:19:6.31:180,6,0	0/1:32,0:31:3.20:3,0,857	0/0:26,0:26:23.86:0,24,236	1/1:2,35:36:22.93:427,23,0	1/1:3,17:20:23.76:332,24,0	1/1:18,4:22:50.84:564,51,0	0/1:20,0:20:92.94:93,0,96	0/1:21,0:21:22.94:23,0,150	0/1:35,0:35:99:160,0,113	0/0:20,0:19:0.02:0,0,491	0/1:17,0:15:24.80:189,0,25	0/1:17,0:17:19.95:159,0,20	0/0:35,0:34:28.64:0,29,375	0/1:28,0:28:99:141,0,107	1/1:1,17:18:5.73:113,6,0	1/1:6,25:31:27.54:456,28,0	0/1:37,0:37:75.76:180,0,76	0/1:24,0:24:3.33:3,0,652	0/0:20,0:20:15.99:0,16,412	0/0:11,0:10:5.02:0,5,282
chr10	6324552	.	TGA	T	6232.65	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=4.837;DP=827;FS=1.470;HRun=0;HaplotypeScore=114.0853;InbreedingCoeff=0.9995;MQ=87.46;MQ0=3;MQRankSum=-3.967;QD=38.95;ReadPosRankSum=4.060;VQSLOD=6.9453;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,163,2939	0/0:9,0:9:27.09:0,27,495	0/0:30,0:30:90.31:0,90,1575	0/0:27,0:27:64.46:0,64,1097	0/0:27,0:27:78.27:0,78,1421	0/0:32,0:32:93.32:0,93,1698	0/0:35,0:35:99:0,99,1774	0/0:35,0:35:99:0,105,1924	0/0:26,0:26:78.25:0,78,1400	0/0:28,0:28:78.27:0,78,1419	0/0:26,0:26:75.25:0,75,1345	1/1:1,29:29:78.26:1118,78,0	1/1:2,34:36:99:1461,102,0	1/1:0,37:37:99:1462,102,0	0/0:29,0:29:78.27:0,78,1430	0/0:22,0:22:60.21:0,60,1099	0/0:26,0:26:78.27:0,78,1430	0/0:25,0:24:72.25:0,72,1318	0/0:36,0:36:93.32:0,93,1701	0/0:36,0:36:99:0,108,1980	0/0:48,0:48:99:0,141,2546	0/0:23,0:23:66.23:0,66,1210	1/1:2,16:18:45.15:645,45,0	1/1:0,39:37:99:1548,108,0	0/0:25,0:25:75.26:0,75,1366	0/0:33,0:33:96.32:0,96,1733	0/0:25,0:25:69.24:0,69,1262	0/0:9,0:9:27.09:0,27,495
chr10	6325606	.	CA	C	1825.22	PASS	AB=0.964;AC=18;AF=0.321;AN=56;BaseQRankSum=13.940;DP=604;FS=1.114;HRun=1;HaplotypeScore=133.2317;InbreedingCoeff=0.7456;MQ=73.53;MQ0=2;MQRankSum=1.091;QD=7.87;ReadPosRankSum=4.353;VQSLOD=1.1733;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:96.71:0,97,1393	0/0:9,0:9:20.93:0,21,193	0/0:19,0:15:31.35:0,31,449	0/0:14,0:12:26.68:0,27,280	0/0:27,0:27:62.04:0,62,545	1/1:22,0:22:10.10:198,10,0	0/1:12,1:13:16.85:121,0,17	0/0:22,0:22:60.09:0,60,760	1/1:17,0:17:15.57:180,16,0	0/0:31,0:31:64.13:0,64,877	0/0:27,0:27:68.49:0,68,648	0/0:15,1:16:4:0,4,260	0/0:20,1:20:52.69:0,53,464	0/0:20,1:19:45.65:0,46,421	1/1:19,0:19:18.06:176,18,0	1/1:19,0:19:20.92:192,21,0	1/1:27,0:27:5.79:211,6,0	0/0:26,0:26:74.80:0,75,656	1/1:30,3:33:3.47:281,3,0	1/1:28,0:28:11.21:153,11,0	0/0:26,0:26:70.70:0,71,655	1/1:25,1:25:59.78:328,60,0	0/0:19,0:18:52.39:0,52,459	0/0:7,0:6:9.74:0,10,94	0/1:28,0:28:16.55:182,0,17	0/0:18,0:18:51.03:0,51,703	0/0:23,0:23:59.20:0,59,848	0/0:10,0:10:27.09:0,27,387
chr10	6325607	.	AC	A	6600.22	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=13.218;DP=590;FS=0.788;HRun=3;HaplotypeScore=114.1417;InbreedingCoeff=0.3096;MQ=73.15;MQ0=2;MQRankSum=0.438;QD=16.22;ReadPosRankSum=6.298;VQSLOD=4.2302;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,99,1293	0/0:8,0:8:1.22:0,1,37	0/0:18,0:14:33.27:0,33,343	0/1:14,0:12:6.29:6,0,134	0/1:27,0:27:38.46:38,0,47	1/1:5,17:22:50.97:657,51,0	1/1:1,10:11:27.07:335,27,0	0/0:19,0:19:46.02:0,46,620	1/1:0,16:16:39.13:504,39,0	0/1:31,0:31:27.54:28,0,160	0/1:27,0:27:18.58:19,0,101	0/1:16,0:16:26.32:26,0,45	0/1:21,0:20:29.79:30,0,98	0/1:21,0:19:27.82:28,0,75	1/1:1,18:19:42.14:542,42,0	1/1:0,18:18:45.15:582,45,0	1/1:3,24:27:54.15:680,54,0	0/0:29,0:29:7.43:0,7,52	1/1:6,26:32:84.13:912,84,0	1/1:3,25:28:66.97:699,67,0	0/0:26,0:26:1.57:0,2,80	1/1:2,24:25:66.13:808,66,0	0/1:18,0:17:11.07:11,0,96	0/1:7,0:6:11.59:16,0,12	1/1:3,23:26:54.14:681,54,0	0/0:17,0:17:51.12:0,51,709	0/0:22,0:22:44.75:0,45,771	0/0:9,0:9:27.02:0,27,355
chr10	6325608	.	CCT	C	1090.02	PASS	AB=0.969;AC=18;AF=0.321;AN=56;BaseQRankSum=14.383;DP=586;FS=1.089;HRun=0;HaplotypeScore=142.8428;InbreedingCoeff=0.8455;MQ=71.41;MQ0=3;MQRankSum=0.788;QD=4.80;ReadPosRankSum=3.122;VQSLOD=2.7083;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,102,1793	0/0:8,0:8:17.76:0,18,118	0/0:18,0:14:21.22:0,21,430	0/0:12,0:10:21.58:0,22,222	0/0:27,0:27:53.78:0,54,428	0/1:22,0:22:0.67:68,0,1	1/1:12,0:11:11.68:38,12,0	0/0:20,0:20:51.10:0,51,884	1/1:17,0:17:9.47:52,9,0	0/0:30,0:30:87.51:0,88,591	0/0:26,0:26:70.70:0,71,509	0/0:16,0:16:41.23:0,41,265	0/0:20,0:19:54.24:0,54,402	0/0:21,0:19:56.23:0,56,380	1/1:21,0:21:11.50:58,12,0	1/1:18,0:18:30.56:84,31,0	1/1:25,1:26:36.75:142,37,0	0/0:29,0:29:73.96:0,74,479	1/1:31,0:31:12.53:302,13,0	0/1:28,2:30:35.10:253,0,35	0/0:26,0:26:73.76:0,74,501	1/1:25,1:25:45.57:154,46,0	0/0:17,0:16:46.83:0,47,347	0/0:7,0:6:14.63:0,15,90	1/1:23,1:24:37.64:143,38,0	0/0:17,0:17:51.13:0,51,972	0/0:22,0:22:56.39:0,56,1061	0/0:9,0:9:18.83:0,19,439
chr10	6325609	.	CT	C	6082.55	PASS	AB=1.000;AC=41;AF=0.732;AN=56;BaseQRankSum=8.731;DP=589;FS=0.401;HRun=10;HaplotypeScore=118.0505;InbreedingCoeff=0.6852;MQ=71.12;MQ0=3;MQRankSum=2.632;QD=12.94;ReadPosRankSum=4.879;VQSLOD=4.3215;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:87.18:0,87,927	1/1:1,7:8:11.99:104,12,0	0/0:17,1:14:4.78:0,5,165	0/1:12,0:10:5.13:5,0,65	1/1:3,24:27:65.90:558,66,0	0/1:21,0:21:3.26:163,0,3	1/1:12,0:11:24.99:112,25,0	0/0:19,1:20:19:0,19,407	1/1:19,0:19:19.45:145,19,0	1/1:6,24:30:71.93:615,72,0	1/1:5,21:26:56.96:494,57,0	1/1:6,10:16:32.94:283,33,0	1/1:10,10:19:4.88:339,5,0	1/1:6,15:19:44.97:386,45,0	1/1:22,0:22:22.29:159,22,0	1/1:18,0:18:41.22:179,41,0	1/1:26,0:26:50.54:239,51,0	1/1:2,27:29:68.98:599,69,0	1/1:31,0:31:6.04:173,6,0	0/1:33,0:33:75.95:117,0,76	1/1:4,22:26:62.97:547,63,0	1/1:26,0:25:55.99:265,56,0	1/1:5,11:15:5.81:279,6,0	1/1:2,5:6:11.94:103,12,0	1/1:24,0:24:49.45:217,49,0	0/0:17,0:17:48.13:0,48,531	0/0:22,0:22:41.69:0,42,551	0/0:8,0:9:17.10:0,17,226
chr10	6325624	.	C	CTT	1997.64	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=-2.264;DP=552;FS=6.314;HRun=8;HaplotypeScore=141.8823;InbreedingCoeff=0.8713;MQ=60.29;MQ0=3;MQRankSum=-2.849;QD=21.71;ReadPosRankSum=-2.760;VQSLOD=1.0868;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:28:74.39:0,74,798	0/0:6,0:6:9.01:0,9,91	0/0:12,0:8:10.94:0,11,83	0/1:7,0:5:8.16:18,0,8	0/0:27,0:27:69.05:0,69,731	0/0:21,0:21:45.10:0,45,501	0/0:9,0:8:18.04:0,18,200	0/0:20,0:20:35.99:0,36,365	0/0:18,0:18:45.10:0,45,501	0/0:30,0:30:58.35:0,58,792	0/0:24,0:24:63.15:0,63,702	1/1:2,15:17:32.86:521,33,0	1/1:10,9:18:33.08:478,33,0	1/1:6,14:18:36.07:520,36,0	0/0:19,0:19:48.10:0,48,526	0/0:19,0:19:45.08:0,45,491	0/0:26,0:26:63.14:0,63,693	0/0:30,0:30:66.06:0,66,698	0/0:24,0:24:26.82:0,27,272	0/0:29,0:29:75.18:0,75,825	0/0:22,0:22:60.14:0,60,659	0/0:23,0:22:51.11:0,51,568	1/1:6,15:20:39.02:519,39,0	1/1:5,3:7:9.87:117,10,0	0/0:22,0:22:45.03:0,45,472	0/0:21,0:21:45.10:0,45,501	0/0:20,0:20:42.02:0,42,444	0/0:10,0:10:27.06:0,27,301
chr10	6326695	.	GACAT	G	2576.17	PASS	AB=0.722;AC=19;AF=0.339;AN=56;BaseQRankSum=13.425;DP=695;FS=6.411;HRun=0;HaplotypeScore=179.5434;InbreedingCoeff=0.8753;MQ=59.73;MQ0=1;MQRankSum=-12.409;QD=14.47;ReadPosRankSum=3.669;VQSLOD=2.6501;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:83.43:0,83,1977	0/0:10,0:10:30.07:0,30,697	0/0:29,0:23:65.85:0,66,1414	0/0:20,0:18:38.95:0,39,826	0/0:37,0:37:99:0,105,2702	1/1:9,12:20:35.72:397,36,0	1/1:16,4:20:1.04:166,1,0	0/0:25,0:25:63.17:0,63,1371	1/1:8,14:22:42.14:542,42,0	0/0:36,0:36:99:0,102,2394	0/0:26,0:26:75.20:0,75,1632	0/0:27,0:27:75.19:0,75,1808	0/0:46,0:46:99:0,132,3415	0/0:23,0:23:69.17:0,69,1632	1/1:10,4:14:15.04:181,15,0	1/1:8,10:18:27.07:334,27,0	1/1:11,6:17:12.51:157,13,0	0/0:16,0:16:35.75:0,36,785	0/1:8,5:13:38.05:204,0,38	1/1:4,11:14:24.08:307,24,0	0/0:28,0:28:84.25:0,84,2090	1/1:10,9:19:21.90:223,22,0	0/0:39,0:39:99:0,105,2502	0/0:20,0:20:51.15:0,51,1309	1/1:11,8:19:22.31:273,22,0	0/0:37,0:37:99:0,108,2626	0/0:42,0:42:99:0,123,2857	0/0:18,0:17:51.18:0,51,1288
chr10	6326698	.	A	AGAG	933.75	PASS	AB=0.952;AC=9;AF=0.161;AN=56;BaseQRankSum=4.764;DP=650;FS=0.695;HRun=0;HaplotypeScore=165.8846;InbreedingCoeff=-0.1874;MQ=63.92;MQ0=1;MQRankSum=-5.258;QD=7.59;ReadPosRankSum=-2.332;VQSLOD=2.8641;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:85.77:0,86,1530	0/0:11,0:11:33.08:0,33,552	0/0:30,0:26:71.78:0,72,1220	0/0:21,0:17:41.73:0,42,760	0/0:35,0:35:99:0,105,1925	0/1:16,0:16:99:190,0,111	0/1:13,0:13:99:251,0,117	0/0:23,0:23:66.22:0,66,1197	0/1:17,0:17:5.36:5,0,104	0/0:36,0:36:99:0,105,1901	0/0:25,0:25:75.24:0,75,1365	0/0:25,0:25:75.26:0,75,1397	0/0:44,0:44:99:0,132,2457	0/0:25,0:25:75.17:0,75,1269	0/1:8,0:8:40.31:51,0,40	0/0:15,0:15:9.21:0,9,138	0/1:12,0:12:13.67:14,0,37	0/0:15,0:15:38.58:0,39,638	0/1:11,1:12:96.88:147,0,97	0/1:13,0:12:63.76:128,0,64	0/0:28,0:28:84.29:0,84,1565	0/1:14,1:15:93.61:235,0,94	0/0:37,0:37:99:0,111,2020	0/0:19,0:19:51.09:0,51,950	0/1:10,6:17:50.32:50,0,72	0/0:39,0:39:99:0,114,1998	0/0:41,0:41:99:0,123,2227	0/0:22,0:21:63.22:0,63,1139
chr10	6326703	.	GACAAACAGACAA	G	8104.47	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=17.248;DP=648;FS=49.431;HRun=0;HaplotypeScore=259.2683;InbreedingCoeff=0.9994;MQ=65.17;MQ0=1;MQRankSum=-15.020;QD=57.89;ReadPosRankSum=-1.168;VQSLOD=2.7835;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:34:96.24:0,96,4575	0/0:11,0:11:33.11:0,33,1644	0/0:29,0:26:75.26:0,75,3380	0/0:19,0:17:45.63:0,46,2218	0/0:35,0:35:99:0,105,6044	1/1:4,12:16:48:1135,48,0	1/1:8,4:12:32.79:461,33,0	0/0:23,0:23:66.23:0,66,3203	1/1:5,14:19:51.03:1426,51,0	0/0:35,0:35:99:0,102,5647	0/0:23,0:23:63.22:0,63,3344	0/0:25,0:25:75.26:0,75,4273	0/0:46,0:46:99:0,138,7626	0/0:24,0:24:69.24:0,69,3830	1/1:5,4:9:23.87:471,24,0	1/1:4,10:14:41.92:920,42,0	1/1:7,6:13:29.62:505,30,0	0/0:15,0:15:35.15:0,35,1670	1/1:10,5:14:44.83:765,45,0	1/1:1,11:11:32.95:835,33,0	0/0:28,0:28:84.29:0,84,4849	1/1:7,9:16:41.75:722,42,0	0/0:38,0:38:99:0,111,5970	0/0:22,0:22:60.68:0,61,3191	1/1:6,8:14:39.02:864,39,0	0/0:41,0:41:99:0,123,6538	0/0:38,0:38:99:0,111,6400	0/0:22,0:21:63.22:0,63,3184
chr10	6326949	.	CAT	C	473.61	PASS	AB=0.565;AC=18;AF=0.321;AN=56;BaseQRankSum=7.268;DP=775;FS=30.317;HRun=0;HaplotypeScore=265.5274;InbreedingCoeff=0.7732;MQ=55.03;MQ0=6;MQRankSum=-6.983;QD=2.37;ReadPosRankSum=-0.409;VQSLOD=1.3654;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:56.95:0,57,1064	0/0:13,0:13:39.13:0,39,667	0/0:31,0:18:29.96:0,30,451	0/0:42,0:13:18.08:0,18,243	0/0:23,0:23:57.20:0,57,979	1/1:5,11:15:2.75:40,3,0	1/1:5,9:14:8.62:119,9,0	0/0:31,0:31:84.26:0,84,1341	1/1:8,12:20:8.52:97,9,0	0/0:47,0:46:99:0,129,2214	0/0:30,0:29:75.19:0,75,1255	0/0:46,0:46:99:0,129,2207	0/0:37,0:37:96.33:0,96,1644	0/0:33,0:33:87.28:0,87,1466	0/1:3,13:16:0.15:0,0,0	1/1:7,4:11:3.19:41,3,0	1/1:1,2:2:6.02:80,6,0	0/0:22,0:22:60.16:0,60,1006	1/1:1,5:6:18.01:218,18,0	1/1:15,37:52:2.50:40,2,0	0/0:23,0:23:38.71:0,39,667	1/1:9,12:21:0.10:0,0,0	0/0:32,0:32:93.29:0,93,1556	0/0:29,0:29:66.23:0,66,1129	0/1:11,30:41:0.19:0,0,1	0/0:36,0:36:99:0,102,1719	0/0:43,0:43:99:0,108,1840	0/0:17,0:17:36.11:0,36,579
chr10	6326961	.	TAC	T	278.09	PASS	AB=0.792;AC=13;AF=0.232;AN=56;BaseQRankSum=5.250;DP=789;FS=24.951;HRun=0;HaplotypeScore=282.8323;InbreedingCoeff=0.3028;MQ=54.10;MQ0=6;MQRankSum=0.147;QD=1.32;ReadPosRankSum=-4.715;VQSLOD=0.0690;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:39:46.85:0,47,940	0/0:13,0:13:39.09:0,39,683	0/0:29,0:18:32.98:0,33,594	0/0:38,0:16:12.39:0,12,277	0/0:27,0:27:78.24:0,78,1427	1/1:17,3:19:6.97:184,7,0	0/1:10,4:14:16.60:17,0,30	0/0:38,0:38:99:0,114,2054	0/1:15,4:19:16.13:49,0,16	0/0:47,0:46:99:0,138,2503	0/0:27,0:27:78.20:0,78,1443	0/0:49,0:49:99:0,141,2632	0/0:36,0:36:99:0,105,1943	0/0:33,0:33:93.32:0,93,1758	1/1:16,4:20:2.98:32,3,0	0/1:6,6:12:7.88:38,0,8	0/1:4,1:4:19.13:29,0,19	0/0:22,0:22:66.17:0,66,1201	0/1:6,1:7:9.96:10,0,132	0/1:39,16:54:6.93:41,0,7	0/0:25,0:25:36.17:0,36,676	1/1:14,4:17:3.45:26,3,0	0/0:34,0:34:99:0,102,1903	0/0:28,0:28:66.21:0,66,1240	0/1:30,11:41:0.34:1,0,0	0/0:38,0:38:99:0,102,1871	0/0:42,0:42:99:0,102,1858	0/0:13,0:13:30.02:0,30,422
chr10	6326963	.	C	CAT	484.76	PASS	AB=0.962;AC=13;AF=0.232;AN=56;BaseQRankSum=3.803;DP=804;FS=46.861;HRun=0;HaplotypeScore=291.3236;InbreedingCoeff=0.3067;MQ=53.76;MQ0=7;MQRankSum=1.401;QD=2.69;ReadPosRankSum=-4.795;VQSLOD=0.9196;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:43.38:0,43,562	0/0:12,0:12:36.10:0,36,477	0/0:29,0:16:26.54:0,27,341	0/0:37,0:15:12.54:0,13,198	0/0:27,0:27:72.22:0,72,971	1/1:17,3:19:1.08:251,1,0	0/1:12,1:13:44.04:44,0,68	0/0:40,0:40:99:0,105,1424	0/1:19,3:22:70.07:81,0,70	0/0:46,0:45:99:0,123,1661	0/0:26,0:26:75.21:0,75,992	0/0:50,0:50:99:0,144,1892	0/0:37,0:37:99:0,102,1323	0/0:33,0:33:93.30:0,93,1261	1/1:21,2:23:2.98:53,3,0	0/1:12,0:12:35.38:37,0,35	0/1:5,0:4:28.96:29,0,73	0/0:22,0:22:63.17:0,63,843	0/1:9,0:9:25.27:25,0,205	1/1:56,1:56:2.30:65,2,0	0/0:24,0:24:32.99:0,33,396	1/1:18,1:18:5.79:47,6,0	0/0:36,0:36:99:0,105,1389	0/0:29,0:29:66:0,66,885	0/0:42,0:42:0.38:0,0,2	0/0:39,0:39:90.29:0,90,1209	0/0:42,0:42:93.28:0,93,1243	0/0:13,0:13:18.04:0,18,229
chr10	6326975	.	AACATACAT	A	2380.82	PASS	AC=12;AF=0.231;AN=52;BaseQRankSum=-1.449;DP=771;FS=4.291;HRun=0;HaplotypeScore=342.2235;InbreedingCoeff=0.8784;MQ=52.36;MQ0=12;MQRankSum=-9.006;QD=13.45;ReadPosRankSum=-6.019;VQSLOD=0.5629;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:20,13:33:26.23:165,26,0	0/0:5,0:11:17.98:0,18,169	./.	./.	0/0:9,0:28:62.91:0,63,603	0/0:21,0:20:26.75:0,27,559	0/0:16,0:16:12.04:0,12,248	1/1:35,7:40:23.64:292,24,0	0/0:25,0:25:14.29:0,14,265	0/0:19,0:46:80.91:0,81,745	0/0:11,0:26:41.88:0,42,353	0/0:47,0:47:81.25:0,81,2474	0/0:31,0:31:66.20:0,66,2126	0/0:37,0:37:63.20:0,63,2045	0/0:24,0:24:11.35:0,11,267	0/0:16,0:16:7.88:0,8,176	0/0:5,0:4:3.01:0,3,55	0/0:20,0:20:33.04:0,33,1047	0/0:10,0:10:11.97:0,12,162	0/0:51,0:50:10.51:0,11,223	1/1:11,9:20:6.87:41,7,0	0/0:20,0:19:10.10:0,10,209	0/0:38,0:38:69.22:0,69,2256	0/0:26,0:26:38.85:0,39,1190	0/0:45,0:45:21.46:0,21,421	1/1:15,18:33:54.17:1240,54,0	1/1:20,19:39:41.88:683,42,0	1/1:5,5:10:9.89:133,10,0
chr10	6327100	.	GA	G	5423.23	PASS	AB=0.500;AC=29;AF=0.518;AN=56;BaseQRankSum=17.655;DP=554;FS=11.251;HRun=3;HaplotypeScore=146.1161;InbreedingCoeff=0.9143;MQ=75.10;MQ0=0;MQRankSum=-7.133;QD=19.51;ReadPosRankSum=2.327;VQSLOD=3.5732;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:81.27:0,81,1161	0/0:13,0:13:39.13:0,39,560	0/0:16,0:16:42.13:0,42,584	0/0:11,0:11:30.08:0,30,399	0/0:32,0:32:93.30:0,93,1320	1/1:1,0:11:17.58:54,18,0	0/1:0,0:11:11.23:35,0,11	0/0:23,0:23:66.21:0,66,930	1/1:2,0:13:13.75:61,14,0	0/0:17,0:17:48.16:0,48,691	0/0:26,0:25:69.22:0,69,976	1/1:1,31:32:90.28:1116,90,0	1/1:2,30:32:84.21:1040,84,0	1/1:1,22:23:66.21:818,66,0	1/1:3,0:21:33.30:102,33,0	1/1:0,0:9:19.98:61,20,0	1/1:1,0:8:12.95:40,13,0	0/0:14,0:14:42.14:0,42,605	1/1:1,0:12:24.42:76,24,0	1/1:2,0:22:7.66:78,8,0	0/0:24,0:24:66.22:0,66,950	1/1:1,0:15:28.31:87,28,0	1/1:2,28:30:81.25:1003,81,0	1/1:0,20:20:60.19:744,60,0	1/1:1,0:19:35.34:108,35,0	0/0:20,0:20:54.17:0,54,761	0/0:28,0:28:81.27:0,81,1157	0/0:23,0:23:69.21:0,69,974
chr10	6327600	.	TC	T	3939.98	PASS	AB=0.989;AC=14;AF=0.250;AN=56;BaseQRankSum=-0.961;DP=656;FS=4.237;HRun=5;HaplotypeScore=89.5854;InbreedingCoeff=0.5903;MQ=82.88;MQ0=0;MQRankSum=-2.036;QD=17.43;ReadPosRankSum=0.527;VQSLOD=3.2288;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,129,1650	0/0:11,0:11:33.11:0,33,446	0/0:21,0:21:60.10:0,60,680	0/0:19,0:19:54.10:0,54,673	0/0:26,0:25:78.21:0,78,1018	0/0:22,0:22:3.50:0,3,187	0/1:23,0:23:18.02:18,0,136	0/0:31,0:31:78.24:0,78,1029	0/1:21,1:22:26.05:26,0,149	0/0:21,0:21:63.18:0,63,806	0/0:29,0:29:81.12:0,81,1017	1/1:0,24:24:66.19:747,66,0	1/1:2,36:38:99:1120,99,0	1/1:0,26:26:72.21:815,72,0	0/1:23,0:23:37.85:38,0,134	0/1:28,0:28:21.69:22,0,191	0/0:30,0:30:56.51:0,57,315	0/0:13,0:13:38.97:0,39,468	0/0:15,0:15:19.37:0,19,132	0/0:22,0:22:10.71:0,11,197	0/0:11,0:11:33.08:0,33,428	0/0:31,0:31:30.40:0,30,293	1/1:2,19:21:51.15:577,51,0	1/1:1,20:21:51.15:577,51,0	0/0:19,0:19:35.53:0,36,176	0/0:23,0:23:57.18:0,57,756	0/0:30,0:29:84.28:0,84,1135	0/0:9,0:9:27.09:0,27,364
chr10	6328079	.	TG	T	23920.83	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=2.194;DP=693;FS=0.000;HRun=2;HaplotypeScore=116.5484;InbreedingCoeff=0.9988;MQ=88.04;MQ0=0;MQRankSum=-11.189;QD=37.09;ReadPosRankSum=5.686;VQSLOD=4.2125;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,41:41:99:1557,120,0	1/1:0,14:14:42.14:545,42,0	0/0:25,0:25:70.25:0,70,1020	0/0:23,0:23:63.17:0,63,889	1/1:0,33:33:96.31:1247,96,0	1/1:0,19:19:54.18:701,54,0	1/1:0,28:28:78.25:1013,78,0	1/1:0,29:29:87.28:1128,87,0	1/1:0,28:28:78.25:1012,78,0	1/1:1,37:38:99:1406,111,0	1/1:0,24:24:69.22:896,69,0	1/1:0,24:24:66.21:856,66,0	1/1:0,23:23:69.22:896,69,0	1/1:2,13:15:39.08:493,39,0	1/1:0,31:31:93.30:1207,93,0	1/1:1,32:33:93.30:1207,93,0	1/1:0,26:26:75.24:973,75,0	1/1:0,19:19:54.18:701,54,0	1/1:0,19:19:57.17:726,57,0	1/1:0,15:15:45.15:584,45,0	1/1:2,33:35:90.29:1168,90,0	1/1:1,26:27:81.26:1048,81,0	1/1:0,32:32:90.29:1168,90,0	1/1:0,27:27:75.24:973,75,0	1/1:1,11:12:33.11:429,33,0	1/1:0,18:18:54.18:701,54,0	1/1:0,27:27:75.24:973,75,0	1/1:0,8:8:24.08:312,24,0
chr10	6328342	.	C	CA	6129.18	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-4.736;DP=532;FS=4.329;HRun=4;HaplotypeScore=61.9981;InbreedingCoeff=0.9942;MQ=79.59;MQ0=0;MQRankSum=-0.143;QD=37.37;ReadPosRankSum=0.089;VQSLOD=4.8542;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,107,1183	0/0:9,0:9:24.07:0,24,272	0/0:24,0:23:35.37:0,35,382	0/0:17,0:17:27.42:0,27,395	0/0:22,0:22:66.19:0,66,748	1/1:0,18:17:42.14:575,42,0	1/1:1,24:25:69.23:944,69,0	0/0:19,0:19:51.05:0,51,578	1/1:3,10:13:39.05:491,39,0	0/0:24,0:24:60.17:0,60,680	0/0:17,0:17:45.13:0,45,510	0/0:12,0:12:33.09:0,33,374	0/0:23,0:23:60.14:0,60,667	0/0:18,0:18:48.14:0,48,544	1/1:0,12:12:33.11:451,33,0	1/1:1,16:17:48.12:635,48,0	1/1:0,17:17:51.17:697,51,0	0/0:30,0:30:84.22:0,84,942	1/1:1,6:7:21.07:285,21,0	1/1:1,17:18:48.16:657,48,0	0/0:12,0:12:36.10:0,36,408	1/1:1,15:16:42.11:575,42,0	0/0:19,0:19:51.14:0,51,579	0/0:32,0:32:87.25:0,87,987	1/1:1,20:21:60.20:820,60,0	0/0:25,0:25:72.21:0,72,817	0/0:23,0:23:63.16:0,63,705	0/0:4,0:4:12.03:0,12,136
chr10	6328435	.	A	AG	2928.37	PASS	AB=0.848;AC=21;AF=0.375;AN=56;BaseQRankSum=7.808;DP=423;FS=6.476;HRun=0;HaplotypeScore=76.6798;InbreedingCoeff=0.7163;MQ=55.75;MQ0=10;MQRankSum=-5.669;QD=20.77;ReadPosRankSum=-4.515;VQSLOD=3.8541;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:19:42.11:0,42,552	0/0:12,0:12:36.11:0,36,487	0/0:14,0:6:18.06:0,18,249	0/0:16,0:7:16.87:0,17,206	0/0:21,0:21:60.15:0,60,787	1/1:0,11:10:24.08:342,24,0	0/1:2,10:11:11.48:358,0,11	0/0:26,0:24:69.01:0,69,854	1/1:2,6:8:20.99:276,21,0	0/0:28,0:25:0.83:0,1,673	0/1:20,0:20:23.80:24,0,457	0/0:14,0:14:34.95:0,35,145	0/0:21,0:21:29.37:0,29,190	0/0:17,0:17:21.14:0,21,155	1/1:0,4:4:12.04:169,12,0	1/1:1,6:7:21.05:282,21,0	1/1:3,6:9:24.01:284,24,0	0/0:16,0:15:21.07:0,21,442	1/1:6,11:14:38.66:505,39,0	1/1:7,9:16:39.88:476,40,0	0/0:3,0:3:9:0,9,106	1/1:4,2:6:12.01:137,12,0	0/1:21,0:19:64.47:64,0,85	0/0:19,0:19:40.25:0,40,199	1/1:5,5:10:18.03:220,18,0	0/0:12,0:19:48.39:0,48,594	0/0:21,0:32:81.18:0,81,1006	0/0:4,0:4:12.04:0,12,166
chr10	6328491	.	GA	G	4962.02	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=5.023;DP=481;FS=8.653;HRun=3;HaplotypeScore=97.9575;InbreedingCoeff=0.9814;MQ=54.74;MQ0=18;MQRankSum=-0.735;QD=31.01;ReadPosRankSum=1.319;VQSLOD=4.3251;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:59.98:0,60,764	0/0:12,0:12:36.11:0,36,486	0/0:8,0:8:14.64:0,15,240	0/0:6,0:4:9.50:0,10,89	0/0:19,0:19:57.18:0,57,778	1/1:1,14:14:42.13:519,42,0	1/1:4,27:29:81.25:994,81,0	0/0:32,0:23:63.12:0,63,751	1/1:0,11:11:33.10:408,33,0	0/0:27,0:23:66.22:0,66,915	0/0:26,0:26:72.21:0,72,959	0/0:11,0:11:33.11:0,33,456	0/0:21,0:21:57.16:0,57,752	0/0:15,0:14:42.10:0,42,572	1/1:0,11:11:30.09:371,30,0	1/1:4,9:12:26.92:333,27,0	1/1:2,8:10:26.75:319,27,0	0/0:11,0:10:24.08:0,24,333	1/1:7,11:11:33.09:394,33,0	1/1:2,13:14:36.11:441,36,0	0/0:7,0:7:21.05:0,21,268	1/1:3,11:13:36.11:443,36,0	0/0:22,0:20:60.13:0,60,775	0/0:15,2:17:10.25:0,10,532	1/1:3,19:21:60.19:739,60,0	0/0:23,0:23:51.78:0,52,582	0/0:24,0:24:43.45:0,43,465	0/0:14,0:14:38.56:0,39,470
chr10	6328506	.	G	GA	2100.89	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=5.010;DP=513;FS=4.743;HRun=8;HaplotypeScore=117.0202;InbreedingCoeff=0.9573;MQ=60.21;MQ0=7;MQRankSum=-0.271;QD=24.43;ReadPosRankSum=0.943;VQSLOD=3.0092;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:63.03:0,63,577	0/0:13,0:13:36.02:0,36,329	0/0:13,0:13:11.33:0,11,253	0/0:9,0:7:18:0,18,164	0/0:19,0:19:54.02:0,54,494	0/0:15,0:15:42.02:0,42,384	0/0:35,0:33:77.76:0,78,700	0/0:27,0:25:57.02:0,57,518	0/0:13,0:13:36.01:0,36,329	0/0:28,0:24:59.98:0,60,547	0/0:27,0:27:60.02:0,60,549	1/1:2,13:15:39.11:447,39,0	1/1:2,17:19:51.15:588,51,0	1/1:4,11:14:33.10:381,33,0	0/0:13,0:13:30.01:0,30,274	0/0:10,0:10:24.01:0,24,219	0/0:11,0:11:29.98:0,30,274	0/0:15,0:14:29.96:0,30,266	0/0:16,1:16:4.40:0,4,293	0/0:16,0:15:35.99:0,36,323	0/0:10,0:10:30:0,30,269	0/0:19,0:19:48.02:0,48,438	1/1:9,13:20:39.59:449,40,0	1/1:4,11:15:36.10:410,36,0	0/0:21,0:21:48:0,48,439	0/0:27,0:27:60.01:0,60,549	0/0:24,0:24:62.93:0,63,565	0/0:18,0:18:42:0,42,384
chr10	6329651	.	T	TCA	71.41	PASS	AB=0.933;AC=13;AF=0.283;AN=46;BaseQRankSum=1.552;DP=210;FS=1.123;HRun=0;HaplotypeScore=45.8837;InbreedingCoeff=0.0860;MQ=22.64;MQ0=69;MQRankSum=-1.311;QD=0.99;ReadPosRankSum=-1.562;VQSLOD=1.2129;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:3:2.49:0,2,20	1/1:2,0:1:2.94:18,3,0	./.	./.	./.	0/1:13,0:12:25.02:25,0,122	0/0:12,0:10:6.29:0,6,71	0/0:18,0:6:15.86:0,16,162	0/1:8,0:7:6.31:16,0,6	0/0:1,0:1:1.25:0,1,3	0/0:3,0:1:3.01:0,3,45	0/1:4,1:5:1.94:2,0,2	1/1:2,1:2:4.83:45,5,0	1/1:7,0:7:0.35:2,0,0	0/0:8,0:4:1.22:0,1,12	0/0:8,0:8:1.68:0,2,61	0/0:6,0:3:2.83:0,3,24	0/0:4,0:3:3.13:0,3,24	0/0:7,0:3:5.90:0,6,38	0/0:6,0:6:3.64:0,4,8	0/0:38,0:5:0.94:0,1,2	0/1:15,1:14:19.08:19,0,101	0/0:9,0:8:0.49:0,0,36	./.	0/1:14,1:14:10.13:10,0,66	1/1:1,1:1:3.01:49,3,0	0/0:1,0:1:3.01:0,3,45	./.
chr10	6329655	.	C	CCT	402.91	PASS	AB=0.953;AC=16;AF=0.320;AN=50;BaseQRankSum=1.949;DP=241;FS=3.198;HRun=0;HaplotypeScore=46.7920;InbreedingCoeff=-0.0785;MQ=28.24;MQ0=84;MQRankSum=-1.218;QD=3.28;ReadPosRankSum=0.654;VQSLOD=1.2984;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:3:3.45:0,3,23	0/1:4,0:2:19.70:38,0,20	0/0:2,0:1:1.82:0,2,5	./.	./.	0/1:11,2:12:46.40:152,0,46	0/1:12,0:10:7.91:8,0,81	0/0:18,0:6:11.11:0,11,107	0/1:7,0:7:3.13:48,0,3	0/0:2,0:1:0.47:0,0,1	0/0:4,0:2:6:0,6,69	0/0:5,0:5:5.09:0,5,49	1/1:3,0:2:5.05:19,5,0	0/1:7,0:7:3.99:4,0,14	0/1:10,0:5:13.60:14,0,14	0/1:7,0:8:9.62:10,0,97	0/0:10,0:5:7.69:0,8,65	0/0:6,0:4:7.22:0,7,65	0/1:10,0:3:11.17:11,0,12	0/0:7,0:6:5.20:0,5,17	0/0:40,0:5:2.49:0,2,7	0/1:15,1:14:23.69:50,0,24	1/1:10,0:8:4.19:20,4,0	0/0:9,0:4:5.64:0,6,31	0/1:17,1:15:45.20:156,0,45	1/1:3,0:2:2.04:6,2,0	0/0:1,0:1:3.01:0,3,46	./.
chr10	6329657	.	T	TCCTC	189.32	PASS	AB=0.892;AC=12;AF=0.222;AN=54;BaseQRankSum=4.166;DP=267;FS=26.709;HRun=0;HaplotypeScore=53.4662;InbreedingCoeff=0.1809;MQ=32.18;MQ0=92;MQRankSum=-1.413;QD=2.56;ReadPosRankSum=1.817;VQSLOD=0.0939;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:5:7.22:0,7,49	0/0:4,0:2:5.91:0,6,54	0/0:3,0:1:0.89:0,1,2	0/1:9,0:3:0:0,0,0	1/1:3,0:1:3:29,3,0	0/0:16,0:13:9.77:0,10,222	0/0:12,0:11:5.35:0,5,174	0/0:18,0:6:14.84:0,15,202	0/0:8,0:7:11.62:0,12,71	0/0:2,0:1:1.25:0,1,3	0/0:5,0:3:6.02:0,6,107	0/0:4,1:5:10.14:0,10,58	0/1:2,1:2:0.72:74,0,1	0/1:9,0:8:18.32:75,0,18	0/1:9,0:5:14.06:19,0,14	0/0:9,0:9:14.68:0,15,161	0/0:10,0:5:8.72:0,9,101	0/0:8,0:5:8.46:0,8,108	1/1:9,0:3:0.80:12,1,0	0/0:8,0:6:6.64:0,7,53	0/0:43,0:6:3.67:0,4,30	0/1:15,1:14:14.52:15,0,116	0/0:13,0:9:7.36:0,7,45	1/1:11,0:5:1.79:16,2,0	0/0:17,1:15:18.41:0,18,122	0/1:2,1:2:32.11:77,0,32	0/0:1,0:1:3.01:0,3,71	./.
chr10	6329663	.	T	TCA	257.21	PASS	AB=0.957;AC=16;AF=0.296;AN=54;BaseQRankSum=5.858;DP=335;FS=8.181;HRun=0;HaplotypeScore=64.1457;InbreedingCoeff=-0.1076;MQ=33.86;MQ0=99;MQRankSum=-2.654;QD=1.71;ReadPosRankSum=4.275;VQSLOD=0.1881;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:9:12.49:0,12,153	0/1:6,0:4:31.46:31,0,82	1/1:5,0:1:0.47:1,0,0	0/1:17,0:6:0:0,0,0	0/1:10,0:8:4.98:5,0,114	0/1:16,1:13:32.08:32,0,107	0/0:16,1:14:10.52:0,11,237	0/0:18,0:6:7.38:0,7,94	0/1:7,1:6:14.43:39,0,14	0/0:4,0:3:4.82:0,5,34	0/1:6,0:4:15.93:16,0,125	0/0:10,0:8:9.44:0,9,155	0/1:4,0:3:20.13:20,0,21	0/0:8,1:8:8.19:0,8,52	0/1:8,1:5:35.49:54,0,35	0/0:10,0:9:12.57:0,13,144	0/0:12,0:7:18.78:0,19,202	0/0:13,0:10:12.10:0,12,145	0/1:10,0:4:1.87:2,0,33	0/0:12,0:8:6.08:0,6,19	0/0:46,0:9:11.04:0,11,102	0/1:16,0:14:33.89:38,0,34	1/1:13,1:9:10.06:73,10,0	0/0:16,0:10:14.82:0,15,133	0/1:20,0:17:57.55:58,0,99	0/0:5,0:4:11.59:0,12,106	0/1:4,0:4:30.75:31,0,78	./.
chr10	6329669	.	T	TCCTC	261.05	PASS	AB=0.945;AC=12;AF=0.214;AN=56;BaseQRankSum=5.319;DP=386;FS=19.644;HRun=0;HaplotypeScore=77.3741;InbreedingCoeff=-0.1577;MQ=44.81;MQ0=99;MQRankSum=-3.909;QD=1.74;ReadPosRankSum=4.578;VQSLOD=-0.1248;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:14:24.53:0,25,399	0/0:6,0:4:11.96:0,12,186	0/0:10,0:4:2.92:0,3,33	0/1:22,0:9:3.30:3,0,59	0/0:15,0:13:24.53:0,25,382	0/1:15,1:12:20.48:20,0,224	0/1:20,1:18:10.89:11,0,490	0/0:17,0:5:9.03:0,9,173	0/1:8,1:7:13.56:14,0,35	0/0:4,0:3:6.49:0,6,106	0/0:6,0:4:12.04:0,12,222	0/0:12,0:10:23.03:0,23,324	0/1:7,0:6:9.41:9,0,99	0/1:8,1:9:8:8,0,67	0/1:11,1:7:97.79:132,0,98	0/0:11,0:10:19.77:0,20,187	0/0:14,0:9:24.88:0,25,349	0/0:15,0:12:24.71:0,25,387	1/1:11,0:4:1.69:57,2,0	0/0:12,0:9:10.63:0,11,60	0/0:47,0:10:15.56:0,16,206	0/1:16,0:14:77.06:77,0,114	0/1:16,1:12:35.11:61,0,35	0/0:21,0:15:15.09:0,15,405	0/0:18,0:15:1.20:0,1,309	0/1:8,0:7:3.90:4,0,316	0/0:8,0:8:19.31:0,19,298	0/0:2,0:1:3.01:0,3,49
chr10	6331163	.	C	CAAT	13543.98	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-15.734;DP=710;FS=0.000;HRun=0;HaplotypeScore=83.6083;InbreedingCoeff=0.9983;MQ=72.35;MQ0=0;MQRankSum=-1.891;QD=35.93;ReadPosRankSum=1.617;VQSLOD=5.3455;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,99,1390	0/0:15,0:15:39.03:0,39,481	0/0:26,0:25:41.73:0,42,513	0/0:18,0:18:28.88:0,29,410	0/0:32,0:32:75.19:0,75,1007	1/1:6,19:25:45.15:921,45,0	1/1:6,19:25:48.16:982,48,0	0/0:34,0:34:54.16:0,54,748	1/1:8,14:22:37.64:796,38,0	0/0:32,0:32:75.23:0,75,1047	0/0:17,0:17:45.11:0,45,607	1/1:2,21:25:39.13:798,39,0	1/1:8,19:27:34.96:712,35,0	1/1:1,22:23:51.18:1044,51,0	1/1:12,12:24:24.08:491,24,0	1/1:5,17:23:45.15:917,45,0	1/1:6,27:32:63.22:1290,63,0	0/0:25,0:25:57.17:0,57,805	1/1:7,9:16:27.08:507,27,0	1/1:10,29:39:87.16:1619,87,0	0/0:27,0:27:66.15:0,66,877	1/1:5,17:24:53.88:933,54,0	1/1:9,14:23:45.14:876,45,0	1/1:4,9:14:21.07:430,21,0	1/1:6,26:34:60.21:1227,60,0	0/0:32,0:32:72.23:0,72,1023	0/0:27,0:27:72.21:0,72,1003	0/0:8,0:8:21.07:0,21,303
chr10	6331726	.	TCCTTTCCCTAAGGAA	T	20722.57	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=18.352;DP=711;FS=38.622;HRun=0;HaplotypeScore=317.2462;InbreedingCoeff=0.9975;MQ=83.50;MQ0=0;MQRankSum=-17.288;QD=92.51;ReadPosRankSum=3.082;VQSLOD=3.5283;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,147,9126	0/0:10,0:10:30.06:0,30,1767	0/0:18,0:18:48.16:0,48,2228	0/0:29,0:29:84.26:0,84,4094	0/0:26,0:26:78.26:0,78,5183	1/1:0,21:21:45.15:1831,45,0	1/1:0,14:14:39.13:1584,39,0	0/0:37,0:36:99:0,111,6662	1/1:2,24:26:54.19:2284,54,0	0/0:24,0:24:66.17:0,66,4224	0/0:15,0:15:45.14:0,45,3060	0/0:36,0:36:99:0,105,7030	0/0:22,0:22:66.19:0,66,4484	0/0:47,0:47:99:0,138,9164	1/1:0,37:37:87.30:3784,87,0	1/1:0,25:25:54.19:2303,54,0	1/1:0,26:26:57.20:2499,57,0	0/0:22,0:22:63.18:0,63,4368	1/1:3,18:21:57.01:1350,57,0	1/1:0,18:18:42.14:1698,42,0	0/0:40,0:40:99:0,117,7310	1/1:1,15:16:38.84:1440,39,0	0/0:29,0:29:87.30:0,87,5998	0/0:26,0:25:75.21:0,75,4598	1/1:1,19:20:48.16:1949,48,0	0/0:22,0:22:66.23:0,66,4820	0/0:30,0:30:90.28:0,90,5941	0/0:5,0:5:15.02:0,15,437
chr10	6332542	.	ACCTGGCTGTCTGT	A	6076.88	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=12.631;DP=769;FS=1.640;HRun=0;HaplotypeScore=269.8886;InbreedingCoeff=0.9883;MQ=86.44;MQ0=0;MQRankSum=-10.067;QD=39.46;ReadPosRankSum=-1.115;VQSLOD=3.8733;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,108,6534	1/1:3,6:9:18.06:668,18,0	0/0:30,0:30:51.14:0,51,2242	0/0:27,0:28:43.56:0,44,1833	1/1:6,26:32:45.35:1512,45,0	0/0:15,0:15:45.14:0,45,2661	0/0:32,0:32:78.25:0,78,4390	0/0:28,0:28:48.12:0,48,2093	0/0:22,0:22:51.17:0,51,3111	1/1:8,19:27:57.08:1484,57,0	1/1:6,14:20:27.09:1001,27,0	0/0:36,0:36:96.33:0,96,5338	0/0:29,0:29:66.23:0,66,3475	0/0:27,0:27:69.24:0,69,4066	0/0:38,0:38:96.33:0,96,5755	0/0:38,0:38:93.31:0,93,5455	0/0:36,0:36:87.30:0,87,5180	1/1:12,14:26:15.05:568,15,0	0/0:26,0:26:61.06:0,61,3055	0/0:27,0:27:66.23:0,66,3698	1/1:17,23:40:24.08:845,24,0	0/0:21,0:21:44.82:0,45,2173	0/0:18,0:18:42.14:0,42,2045	0/0:34,0:34:87.30:0,87,4901	0/0:33,0:32:84.27:0,84,4643	0/0:26,0:26:66.23:0,66,3723	0/0:20,0:20:54.17:0,54,3279	0/0:4,0:4:12.04:0,12,699
chr10	6333046	.	G	GA	14825.65	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=8.382;DP=691;FS=2.822;HRun=2;HaplotypeScore=148.3748;InbreedingCoeff=0.9997;MQ=87.77;MQ0=0;MQRankSum=-4.993;QD=38.11;ReadPosRankSum=2.217;VQSLOD=4.2649;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,35:38:96.32:1382,96,0	1/1:0,17:17:33:475,33,0	0/0:29,0:29:75.21:0,75,915	0/0:22,0:22:55.80:0,56,726	1/1:1,21:22:60.20:864,60,0	0/0:20,0:20:57.18:0,57,707	0/0:29,0:29:78.24:0,78,966	1/1:3,40:43:99:1709,120,0	0/0:28,0:28:78.24:0,78,967	1/1:3,20:23:60.16:823,60,0	1/1:0,26:26:78.26:1123,78,0	1/1:1,18:19:48.16:691,48,0	1/1:2,21:23:54.18:778,54,0	1/1:2,18:20:51.17:735,51,0	0/0:33,0:33:93.29:0,93,1152	0/0:15,0:15:42.13:0,42,521	0/0:21,0:21:60.16:0,60,729	1/1:0,25:25:72.24:1032,72,0	0/0:24,0:24:69.22:0,69,855	0/0:22,0:22:63.20:0,63,781	1/1:1,27:28:78.26:1123,78,0	0/0:19,0:19:54.17:0,54,669	1/1:0,15:15:42.14:605,42,0	1/1:2,24:26:75.25:1064,75,0	0/0:40,0:40:99:0,120,1487	1/1:2,21:23:66.17:909,66,0	1/1:1,30:31:81.27:1166,81,0	1/1:2,8:10:24.08:346,24,0
chr10	6333502	.	AG	A	5452.11	PASS	AB=0.519;AC=9;AF=0.161;AN=56;BaseQRankSum=11.602;DP=745;FS=2.821;HRun=3;HaplotypeScore=74.7492;InbreedingCoeff=0.9196;MQ=91.28;MQ0=0;MQRankSum=-1.947;QD=34.08;ReadPosRankSum=0.830;VQSLOD=5.4339;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,47:47:99:1598,129,0	0/0:8,0:8:24.07:0,24,327	0/0:28,0:28:75.21:0,75,1045	0/0:32,0:32:80.19:0,80,1169	0/0:30,0:30:90.30:0,90,1293	0/0:26,0:26:78.25:0,78,1103	0/0:25,0:25:69.21:0,69,958	1/1:0,34:34:99:1227,102,0	0/0:14,0:14:42.11:0,42,568	0/0:32,0:32:93.28:0,93,1277	0/0:24,0:24:72.24:0,72,1035	0/0:21,0:21:63.20:0,63,888	0/0:31,0:31:93.31:0,93,1331	0/0:17,0:17:51.17:0,51,734	0/0:17,0:17:51.17:0,51,734	0/0:30,0:29:90.26:0,90,1220	0/0:30,0:30:90.26:0,90,1256	0/0:21,0:21:63.14:0,63,862	0/0:25,0:25:72.21:0,72,987	0/0:27,0:27:75.25:0,75,1079	0/0:37,0:37:99:0,108,1518	0/0:27,0:27:75.71:0,76,1062	0/0:27,0:27:78.18:0,78,1095	0/0:32,0:32:93.27:0,93,1315	0/0:24,0:24:72.24:0,72,1037	0/1:2,26:28:2.18:843,0,2	1/1:0,41:41:99:1412,114,0	1/1:0,10:10:30.09:372,30,0
chr10	6333780	.	CAGAAGCATGT	C	9485.13	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=11.471;DP=724;FS=0.000;HRun=0;HaplotypeScore=247.1446;InbreedingCoeff=0.9987;MQ=78.03;MQ0=0;MQRankSum=-15.373;QD=71.32;ReadPosRankSum=2.545;VQSLOD=4.6079;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,126,6259	0/0:13,0:13:36.12:0,36,1891	0/0:28,0:28:83.83:0,84,3741	0/0:15,0:15:39.13:0,39,1942	0/0:36,0:36:99:0,108,5410	0/0:15,0:15:42.14:0,42,1910	0/0:19,0:19:54.14:0,54,2477	0/0:24,0:24:69.23:0,69,3269	0/0:32,0:32:93.31:0,93,4412	0/0:33,0:33:90.30:0,90,4383	0/0:19,0:19:51.17:0,51,2702	1/1:2,21:23:57.20:1878,57,0	1/1:4,32:36:78.27:2570,78,0	1/1:2,31:33:81.28:2514,81,0	0/0:34,0:34:99:0,99,4845	0/0:33,0:33:99:0,99,4943	0/0:31,0:31:90.31:0,90,4432	0/0:24,0:24:63.22:0,63,3188	0/0:15,0:15:42.14:0,42,2089	0/0:27,0:27:78.27:0,78,3987	0/0:15,0:15:42.14:0,42,1996	0/0:29,0:29:87.29:0,87,4232	1/1:2,27:29:57.90:1832,58,0	1/1:2,10:12:21.07:692,21,0	0/0:24,0:23:69.20:0,69,3237	0/0:32,0:32:84.29:0,84,4310	0/0:42,0:42:99:0,126,6375	0/0:9,0:9:27.09:0,27,1430
chr10	6338120	.	T	TG	2336.06	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=0.207;DP=443;FS=1.470;HRun=1;HaplotypeScore=73.9807;InbreedingCoeff=0.9177;MQ=87.24;MQ0=0;MQRankSum=4.294;QD=21.24;ReadPosRankSum=0.861;VQSLOD=3.8073;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,124,1426	1/1:6,0:6:3.60:106,4,0	0/0:27,0:26:50.24:0,50,487	0/0:22,0:20:32.08:0,32,385	1/1:17,2:19:51.35:510,51,0	0/0:11,0:11:27.79:0,28,147	0/0:14,0:14:30.48:0,30,148	0/0:44,0:44:99:0,120,1333	0/0:10,0:10:22.72:0,23,128	1/1:24,1:25:68.86:679,69,0	1/1:11,1:12:32.94:305,33,0	0/0:7,0:7:11.52:0,12,82	0/0:12,0:12:30.45:0,30,160	0/0:6,0:7:16.72:0,17,80	0/0:12,0:12:25.42:0,25,139	0/0:11,0:11:31.14:0,31,177	0/0:9,0:9:22.94:0,23,156	1/1:20,0:20:41.95:400,42,0	0/0:7,0:7:17.91:0,18,136	0/0:10,0:10:24.33:0,24,102	1/1:27,1:28:51.10:517,51,0	0/0:4,0:4:7.87:0,8,31	0/0:7,0:7:19.71:0,20,102	0/0:14,0:14:17.51:0,18,104	0/0:6,0:6:10.94:0,11,48	0/0:19,0:19:42.64:0,43,516	0/0:28,0:28:78.14:0,78,907	0/0:3,0:3:8.98:0,9,94
chr10	6338121	.	GT	G	2382.25	PASS	AB=0.766;AC=30;AF=0.536;AN=56;BaseQRankSum=-0.095;DP=455;FS=0.418;HRun=11;HaplotypeScore=75.9486;InbreedingCoeff=0.6794;MQ=85.10;MQ0=0;MQRankSum=-10.338;QD=12.34;ReadPosRankSum=2.182;VQSLOD=3.6402;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,3:50:54.98:0,55,1108	0/0:0,0:6:14.03:0,14,67	0/1:22,3:24:34.73:35,0,162	0/1:20,2:20:32.19:32,0,138	0/0:3,0:22:54.32:0,54,290	1/1:1,11:12:29.93:244,30,0	1/1:0,14:14:32.75:264,33,0	0/0:42,0:45:99:0,99,985	1/1:0,10:10:23.93:194,24,0	0/0:1,0:27:53.36:0,53,265	0/0:1,0:13:31.23:0,31,158	0/1:5,4:9:20.92:45,0,21	1/1:0,12:12:32.90:266,33,0	1/1:1,6:7:17.95:143,18,0	1/1:0,12:12:26.93:219,27,0	1/1:1,10:11:31.76:249,32,0	0/1:2,7:9:17.26:83,0,17	0/0:2,0:23:42.19:0,42,207	1/1:0,7:7:17.97:148,18,0	1/1:1,10:11:26.92:218,27,0	0/0:1,0:28:47.71:0,48,227	1/1:0,4:4:8.96:73,9,0	1/1:0,7:7:20.95:169,21,0	1/1:1,14:15:14.94:121,15,0	1/1:0,6:6:11.97:97,12,0	0/0:17,0:18:42.40:0,42,425	0/0:25,1:26:50.54:0,51,735	0/0:4,0:4:6.02:0,6,64
chr10	6338314	.	T	TA	12192.35	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=-10.397;DP=576;FS=0.826;HRun=9;HaplotypeScore=52.0833;InbreedingCoeff=0.9184;MQ=70.54;MQ0=0;MQRankSum=-0.856;QD=27.15;ReadPosRankSum=1.851;VQSLOD=5.0935;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:65.95:0,66,567	1/1:3,13:16:16.82:406,17,0	0/0:9,0:8:14.89:0,15,116	0/0:13,0:12:3.15:0,3,65	1/1:1,24:25:72.08:760,72,0	1/1:3,20:23:57.10:616,57,0	1/1:2,10:12:27.07:299,27,0	0/0:28,0:28:71.95:0,72,615	1/1:1,16:17:45.12:498,45,0	1/1:4,24:28:72.19:789,72,0	1/1:0,17:17:48.09:518,48,0	1/1:1,17:18:45.12:497,45,0	1/1:4,15:19:48.04:504,48,0	1/1:1,15:17:38.94:412,39,0	1/1:1,25:26:66.03:698,66,0	1/1:2,25:27:69.19:763,69,0	1/1:3,29:32:61.18:903,61,0	1/1:1,23:24:60.16:663,60,0	1/1:3,20:23:63.17:693,63,0	1/1:2,25:27:49.15:770,49,0	1/1:0,5:5:12.03:133,12,0	1/1:3,17:20:48.13:531,48,0	1/1:3,17:20:41.89:451,42,0	1/1:3,9:12:24.06:265,24,0	1/1:6,34:41:93.25:1022,93,0	0/0:23,2:24:2.58:0,3,472	0/0:24,0:24:68.97:0,69,596	0/0:5,0:5:15:0,15,130
chr10	6340146	.	TA	T	1816.79	PASS	AB=0.611;AC=28;AF=0.500;AN=56;BaseQRankSum=8.324;DP=402;FS=4.402;HRun=14;HaplotypeScore=45.4199;InbreedingCoeff=0.6853;MQ=54.12;MQ0=16;MQRankSum=2.340;QD=9.87;ReadPosRankSum=3.765;VQSLOD=2.8676;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:25:47.52:0,48,407	0/0:4,0:3:6:0,6,52	0/0:4,0:3:8.84:0,9,66	0/0:4,0:1:2.92:0,3,17	0/0:20,0:22:34.82:0,35,289	1/1:7,18:25:41.64:288,42,0	1/1:2,5:5:8.93:62,9,0	0/0:38,0:30:53.91:0,54,471	1/1:1,5:5:11.90:82,12,0	0/0:17,0:16:27.03:0,27,250	0/0:24,0:24:62.92:0,63,550	1/1:5,5:10:11.87:82,12,0	1/1:2,11:13:6.54:162,7,0	1/1:2,5:7:8.90:62,9,0	1/1:1,4:5:5.95:41,6,0	0/1:2,7:9:4.02:120,0,4	1/1:4,23:27:55.60:376,56,0	0/0:27,0:25:62.81:0,63,553	0/1:14,15:27:30.05:251,0,30	1/1:7,9:14:20.78:144,21,0	0/0:4,0:4:3:0,3,28	1/1:1,8:9:14.83:103,15,0	1/1:0,5:5:5.84:41,6,0	1/1:0,2:2:5.95:41,6,0	1/1:1,12:13:23.81:164,24,0	0/0:17,1:17:15.45:0,15,283	0/0:18,0:18:35.64:0,36,323	0/0:8,1:9:0.21:0,0,118
chr10	6343364	.	T	TCTC	29023.68	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-13.169;DP=671;FS=1.255;HRun=0;HaplotypeScore=81.1599;InbreedingCoeff=0.9958;MQ=81.76;MQ0=0;MQRankSum=-6.071;QD=53.45;ReadPosRankSum=6.243;VQSLOD=6.9312;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,48:51:99:2854,126,0	1/1:0,6:7:18.06:408,18,0	0/0:27,0:27:72.17:0,72,1130	0/0:12,0:12:16.42:0,16,388	1/1:2,35:39:93.32:2103,93,0	1/1:1,22:26:63.22:1415,63,0	1/1:1,17:18:42.14:951,42,0	0/0:29,0:29:78.18:0,78,1251	1/1:1,15:17:39.13:881,39,0	1/1:1,25:29:81.26:1743,81,0	1/1:0,22:22:51.18:1154,51,0	1/1:2,32:34:72.25:1631,72,0	1/1:1,15:17:33:747,33,0	1/1:2,21:23:54.19:1222,54,0	1/1:1,24:26:72.25:1630,72,0	1/1:2,23:25:60.21:1359,60,0	1/1:4,24:29:63.22:1426,63,0	1/1:2,19:21:57.20:1291,57,0	1/1:2,11:13:39.12:752,39,0	1/1:0,25:28:78.14:1621,78,0	1/1:5,23:29:54.15:1223,54,0	1/1:1,24:26:60.21:1355,60,0	1/1:0,17:17:48.16:1086,48,0	1/1:3,22:26:45:1019,45,0	1/1:0,18:20:51.18:1154,51,0	0/0:29,0:29:87.30:0,87,1447	0/0:21,0:21:63.20:0,63,1019	0/0:10,0:10:30.10:0,30,495
chr10	6346584	.	CTG	C	1693.97	PASS	AB=0.974;AC=26;AF=0.464;AN=56;BaseQRankSum=9.368;DP=666;FS=1.359;HRun=0;HaplotypeScore=142.7758;InbreedingCoeff=0.3144;MQ=49.47;MQ0=17;MQRankSum=3.864;QD=4.16;ReadPosRankSum=-3.994;VQSLOD=1.4879;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,1:24:16.92:0,17,281	0/1:14,1:15:9.07:9,0,413	0/1:11,0:5:1.21:1,0,58	0/1:16,1:8:5.60:6,0,46	0/0:19,1:18:30.04:0,30,477	1/1:20,0:17:2.03:107,2,0	1/1:20,0:14:13.36:116,13,0	0/0:40,0:35:96.23:0,96,1434	1/1:21,0:20:7.87:211,8,0	0/0:38,1:35:13.99:0,14,1056	0/0:13,0:13:14.83:0,15,256	0/0:22,0:21:13.23:0,13,594	0/1:32,0:31:89.28:89,0,402	0/1:27,0:24:3.77:4,0,639	1/1:22,0:20:8.01:177,8,0	1/1:36,0:34:21.98:263,22,0	0/1:19,0:18:0.73:142,0,1	0/1:31,2:33:97.77:98,0,915	0/1:19,0:17:38.57:39,0,156	1/1:16,0:14:11.99:100,12,0	0/1:21,2:23:87.71:88,0,520	1/1:32,0:28:20.92:166,21,0	0/1:22,0:22:17.40:17,0,377	0/0:27,0:27:10.24:0,10,493	1/1:22,0:21:29.96:249,30,0	0/0:26,0:24:69.22:0,69,1172	0/0:36,0:36:99:0,105,1843	0/0:11,0:10:30.10:0,30,565
chr10	6347540	.	G	GA	7223.25	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=19.649;DP=774;FS=0.644;HRun=0;HaplotypeScore=121.9829;InbreedingCoeff=0.9299;MQ=78.73;MQ0=0;MQRankSum=-2.752;QD=34.56;ReadPosRankSum=4.107;VQSLOD=4.2396;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,45:47:99:1758,126,0	1/1:1,14:15:39.02:555,39,0	0/0:21,0:21:60.17:0,60,782	0/1:16,0:16:5.05:5,0,409	1/1:1,29:30:78.13:1032,78,0	0/0:20,0:20:60.18:0,60,807	0/0:26,0:26:75.23:0,75,1012	0/0:28,0:28:81.26:0,81,1116	0/0:31,0:31:93.27:0,93,1245	1/1:1,32:33:95.33:1366,95,0	1/1:0,22:22:63.21:891,63,0	0/0:25,0:25:75.22:0,75,1019	0/0:39,0:39:99:0,114,1583	0/0:32,0:32:96.31:0,96,1329	0/0:37,0:37:99:0,111,1532	0/0:46,0:46:99:0,135,1852	0/0:30,0:30:90.23:0,90,1176	1/1:1,13:14:39.13:547,39,0	0/0:23,0:23:66.19:0,66,883	0/0:27,0:27:75.25:0,75,1048	1/1:1,31:32:74.99:1069,75,0	0/0:26,0:26:78.25:0,78,1070	0/0:25,0:25:75.24:0,75,1030	0/0:30,0:30:84.27:0,84,1155	0/0:22,0:22:66.22:0,66,920	0/0:29,0:29:84.75:0,85,1162	0/0:30,0:29:90.30:0,90,1249	0/0:18,0:18:54.18:0,54,754
chr10	6350135	.	T	TAA	20408.41	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-6.103;DP=726;FS=0.000;HRun=10;HaplotypeScore=90.5264;InbreedingCoeff=0.9759;MQ=72.73;MQ0=4;MQRankSum=-4.018;QD=29.71;ReadPosRankSum=3.473;VQSLOD=5.2057;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,34:45:82.31:1176,82,0	1/1:1,17:18:38.62:537,39,0	0/0:27,0:21:24.95:0,25,212	0/0:12,0:12:13.36:0,13,105	1/1:6,16:23:50.07:641,50,0	1/1:3,23:28:68.20:957,68,0	1/1:4,16:21:36.08:497,36,0	1/1:11,33:46:99:1380,102,0	1/1:3,14:17:31.35:451,31,0	1/1:8,35:45:99:1385,102,0	1/1:3,20:25:63.02:804,63,0	1/1:4,21:26:69.19:978,69,0	1/1:3,18:22:33.52:615,34,0	1/1:2,11:14:23.57:322,24,0	1/1:3,25:29:53.15:734,53,0	1/1:2,23:25:57.19:850,57,0	1/1:2,18:21:44.64:636,45,0	1/1:2,17:19:48.16:715,48,0	1/1:5,19:25:59.68:835,60,0	1/1:4,22:30:73.09:922,73,0	1/1:0,12:12:15.05:224,15,0	1/1:3,24:29:74.42:927,74,0	1/1:6,8:17:27.46:359,27,0	1/1:4,24:30:72.24:1053,72,0	1/1:1,16:18:36.12:537,36,0	1/1:5,32:36:94.11:1301,94,0	1/1:8,31:44:88.75:1217,89,0	1/1:3,12:16:24.08:357,24,0
chr10	6351576	.	TTCTCTC	T	93.39	PASS	AB=1.000;AC=12;AF=0.286;AN=42;BaseQRankSum=3.442;DP=566;FS=7.158;HRun=0;HaplotypeScore=117.1956;InbreedingCoeff=0.2086;MQ=71.44;MQ0=11;MQRankSum=-0.825;QD=0.61;ReadPosRankSum=0.082;VQSLOD=1.5613;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:16,0:15:29.59:30,0,111	1/1:9,0:9:3.01:31,3,0	./.	./.	./.	0/1:26,0:25:29.38:29,0,149	0/0:23,0:21:0.71:0,1,166	0/0:29,0:29:6.49:0,6,81	0/0:18,0:17:6:0,6,97	0/0:16,0:16:2.77:0,3,27	0/0:6,4:10:2.97:0,3,20	0/1:15,0:15:0:0,0,0	1/1:17,0:17:3.44:50,3,0	./.	0/1:36,0:36:35.54:36,0,626	0/0:18,0:17:3.01:0,3,75	0/0:18,0:17:22.37:0,22,423	1/1:12,0:12:2.37:8,2,0	0/0:33,0:33:9.02:0,9,138	./.	0/0:22,0:21:0.47:0,0,1	0/0:17,0:17:6.47:0,6,98	./.	1/1:21,0:20:3:27,3,0	./.	0/0:28,0:26:19.41:0,19,375	0/0:20,0:20:18.01:0,18,200	0/0:15,0:13:6.02:0,6,78
chr10	6351871	.	AC	A	15626.59	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=14.004;DP=734;FS=1.184;HRun=1;HaplotypeScore=73.1078;InbreedingCoeff=0.9997;MQ=89.69;MQ0=0;MQRankSum=-2.590;QD=39.07;ReadPosRankSum=6.886;VQSLOD=4.7744;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,132,2084	0/0:13,0:13:39.13:0,39,623	0/0:31,0:31:93.32:0,93,1471	0/0:24,0:24:69.24:0,69,1099	0/0:25,0:25:66.22:0,66,1043	1/1:0,19:19:57.19:797,57,0	1/1:0,15:15:45.15:629,45,0	0/0:29,0:29:87.29:0,87,1363	1/1:0,37:37:99:1427,102,0	0/0:40,0:40:99:0,117,1845	0/0:17,0:17:51.16:0,51,792	1/1:0,28:28:78.26:1091,78,0	1/1:0,40:40:99:1423,102,0	1/1:0,23:23:66.22:923,66,0	1/1:0,35:35:96.32:1343,96,0	1/1:0,31:31:87.29:1217,87,0	1/1:0,30:30:84.28:1175,84,0	0/0:14,0:14:42.14:0,42,663	1/1:0,21:21:63.19:861,63,0	1/1:0,29:29:84.28:1175,84,0	0/0:30,0:30:87.28:0,87,1367	1/1:0,23:23:60.20:839,60,0	1/1:0,17:17:48.16:671,48,0	1/1:0,29:29:78.26:1091,78,0	1/1:0,23:23:69.23:965,69,0	0/0:30,0:30:90.31:0,90,1439	0/0:28,0:28:84.27:0,84,1311	0/0:8,0:8:24.08:0,24,384
chr10	6360902	.	TACAC	T	2828.86	PASS	AC=20;AF=0.385;AN=52;BaseQRankSum=-1.498;DP=551;FS=11.905;HRun=0;HaplotypeScore=114.8110;InbreedingCoeff=0.9137;MQ=58.69;MQ0=7;MQRankSum=1.725;QD=13.34;ReadPosRankSum=2.824;VQSLOD=2.6708;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:20.69:0,21,317	0/0:2,0:9:17:0,17,204	./.	./.	0/0:14,0:21:8.77:0,9,116	1/1:12,14:26:15.04:207,15,0	1/1:5,8:13:15.05:225,15,0	0/0:25,0:24:33.07:0,33,516	1/1:11,8:20:15.02:216,15,0	0/0:25,0:40:65.86:0,66,1067	0/0:5,0:11:5.05:0,5,59	0/0:8,0:14:5.81:0,6,122	0/0:22,0:30:26.91:0,27,351	0/0:9,0:17:15.04:0,15,252	1/1:8,14:22:30.10:471,30,0	1/1:6,17:26:25.88:344,26,0	1/1:12,9:21:18.02:282,18,0	0/0:7,0:12:9.02:0,9,133	1/1:10,6:16:14.73:155,15,0	1/1:7,12:22:27.07:366,27,0	0/0:18,0:18:18.06:0,18,367	1/1:9,12:22:24.07:343,24,0	0/0:8,0:19:11.91:0,12,193	0/0:13,0:23:15.05:0,15,271	1/1:9,15:24:27.56:425,28,0	0/0:16,0:20:30.10:0,30,530	0/0:8,0:16:12.51:0,13,197	0/0:11,0:11:15.05:0,15,307
chr10	6362309	.	T	TATTA	196.02	PASS	AB=0.786;AC=15;AF=0.268;AN=56;BaseQRankSum=7.789;DP=187;FS=13.017;HRun=0;HaplotypeScore=34.4757;InbreedingCoeff=-0.0825;MQ=68.03;MQ0=0;MQRankSum=0.662;QD=2.06;ReadPosRankSum=1.096;VQSLOD=-0.2077;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:9,1:15:98.22:98,0,279	0/0:2,0:2:6.02:0,6,84	0/0:5,0:5:12.03:0,12,135	0/0:5,0:5:8.98:0,9,99	0/0:3,0:3:9.03:0,9,125	0/1:4,0:8:12.81:13,0,149	0/0:2,0:2:6.02:0,6,83	0/0:28,0:28:58.07:0,58,930	1/1:0,0:2:5.75:31,6,0	0/1:6,0:8:15.33:15,0,227	0/0:7,0:7:5.63:0,6,235	0/1:6,0:6:1.59:2,0,190	0/0:4,0:4:11.95:0,12,127	0/0:5,0:5:15.05:0,15,209	0/1:3,0:4:3.40:3,0,113	1/1:0,0:2:2.88:15,3,0	0/1:6,0:11:22.24:22,0,185	0/1:6,0:17:93.73:94,0,227	0/1:3,0:5:15.89:16,0,110	0/1:5,0:6:21.84:22,0,175	0/1:3,0:4:6.39:6,0,69	0/0:2,0:2:6:0,6,66	0/0:4,0:4:12.04:0,12,167	0/0:3,0:3:8.99:0,9,103	0/1:7,0:7:2.58:3,0,229	0/0:8,0:8:24.07:0,24,319	0/0:3,0:3:9.03:0,9,167	0/0:11,0:11:33.09:0,33,471
chr10	6363643	.	T	TG	553.87	PASS	AB=0.542;AC=6;AF=0.107;AN=56;BaseQRankSum=-5.815;DP=565;FS=13.445;HRun=8;HaplotypeScore=85.4258;InbreedingCoeff=0.6391;MQ=74.84;MQ0=3;MQRankSum=-0.140;QD=12.31;ReadPosRankSum=-2.258;VQSLOD=1.2095;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:62.94:0,63,558	0/0:5,0:5:12.01:0,12,110	0/0:23,0:23:43.20:0,43,370	0/0:23,1:22:45.01:0,45,411	0/0:10,0:10:27:0,27,242	0/0:22,0:22:56.89:0,57,507	0/0:24,0:24:50.70:0,51,428	1/1:4,11:14:24.07:275,24,0	0/0:14,0:14:41.96:0,42,374	0/0:6,0:6:9:0,9,82	0/0:6,0:6:15.01:0,15,137	0/0:27,0:27:68.84:0,69,609	0/0:17,0:19:38.04:0,38,335	0/0:19,0:19:44.97:0,45,409	0/0:24,0:24:59.92:0,60,540	0/0:21,0:21:59.91:0,60,530	0/0:38,0:38:99:0,105,936	0/0:30,0:30:68.82:0,69,610	0/0:10,0:10:20.98:0,21,192	0/0:16,0:16:44.93:0,45,401	0/0:51,0:51:99:0,119,1068	0/0:16,0:16:40.86:0,41,337	0/0:14,0:15:40.88:0,41,342	0/0:44,0:45:99:0,125,1122	0/0:26,0:26:68.86:0,69,610	1/1:5,6:11:18.04:198,18,0	0/1:2,10:10:6.52:187,0,7	0/1:1,6:6:21.45:29,0,21
chr10	6364314	.	T	TTCTCTCTC	3456.63	PASS	AB=1.000;AC=42;AF=0.875;AN=48;BaseQRankSum=0.451;DP=610;FS=2.625;HRun=0;HaplotypeScore=158.7224;InbreedingCoeff=0.1006;MQ=64.16;MQ0=39;MQRankSum=-0.845;QD=7.25;ReadPosRankSum=-1.663;VQSLOD=2.6197;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:15:6.02:168,6,0	1/1:10,0:10:6.49:141,6,0	./.	./.	1/1:25,0:25:5.99:118,6,0	1/1:18,0:16:0.47:1,0,0	0/1:20,0:17:0:0,0,0	1/1:28,0:27:6.90:70,7,0	1/1:21,0:21:5.90:101,6,0	1/1:34,0:33:28.20:645,28,0	0/0:19,0:18:0.47:0,0,1	1/1:20,0:20:9.50:215,10,0	1/1:16,0:16:18.01:407,18,0	1/1:20,0:19:3.01:96,3,0	0/1:25,0:23:30.16:125,0,30	1/1:16,4:20:3.48:73,3,0	1/1:17,0:16:1.25:3,1,0	1/1:13,0:9:6.02:126,6,0	1/1:14,0:12:9.03:226,9,0	1/1:24,0:24:0.47:1,0,0	1/1:22,0:17:6.49:186,6,0	./.	1/1:25,0:24:3.01:71,3,0	1/1:22,0:14:9.50:246,10,0	./.	0/1:21,0:19:8.87:218,0,9	0/1:17,0:15:12.56:109,0,13	1/1:24,0:21:12.25:111,12,0
chr10	6365555	.	A	ACATTTTG	8603.67	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-2.185;DP=623;FS=6.599;HRun=0;HaplotypeScore=133.3412;InbreedingCoeff=0.9802;MQ=86.64;MQ0=0;MQRankSum=-12.981;QD=61.02;ReadPosRankSum=-0.045;VQSLOD=4.8135;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,21:29:45.15:1439,45,0	1/1:0,8:8:15.05:583,15,0	0/0:26,0:27:74.79:0,75,1575	0/0:19,0:19:36.08:0,36,772	1/1:4,29:33:66.22:2202,66,0	0/0:22,0:22:57.18:0,57,1373	0/0:19,0:19:48.15:0,48,1147	0/0:35,0:35:93.28:0,93,2067	0/0:17,0:17:48.15:0,48,1141	1/1:5,19:25:48.15:1731,48,0	1/1:4,19:23:33.11:1213,33,0	0/0:19,0:19:54.17:0,54,1298	0/0:14,0:14:42.06:0,42,886	0/0:25,0:25:69.22:0,69,1660	0/0:28,0:28:75.24:0,75,1742	0/0:27,0:27:72.23:0,72,1711	0/0:25,0:25:60.18:0,60,1438	1/1:4,10:14:11.76:1145,12,0	0/0:20,0:20:57.17:0,57,1323	0/0:29,0:29:84.23:0,84,1991	1/1:2,4:9:9.03:291,9,0	0/0:16,0:16:42.13:0,42,998	0/0:19,0:19:54.17:0,54,1292	0/0:28,0:28:72.25:0,72,1797	0/0:32,0:32:84.29:0,84,2096	0/0:24,0:24:57.18:0,57,1326	0/0:25,0:25:72.25:0,72,1769	0/0:12,0:12:33.11:0,33,815
chr10	6366003	.	T	TCATACATACATA	5278.39	PASS	AB=0.622;AC=23;AF=0.411;AN=56;BaseQRankSum=1.264;DP=975;FS=5.855;HRun=0;HaplotypeScore=306.8581;InbreedingCoeff=0.7307;MQ=67.89;MQ0=2;MQRankSum=-4.160;QD=10.73;ReadPosRankSum=-4.182;VQSLOD=2.3817;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:41:3.01:102,3,0	1/1:4,0:18:8.92:225,9,0	0/0:29,0:21:11.94:0,12,105	0/0:31,0:26:2.30:0,2,22	1/1:12,0:32:3.01:77,3,0	0/0:34,0:34:66.19:0,66,1674	0/0:36,0:36:57.13:0,57,1094	0/0:31,0:31:24.05:0,24,322	0/0:52,0:52:99:0,102,2763	1/1:15,0:53:87.26:1863,87,0	1/1:6,0:32:9.79:276,10,0	1/1:15,25:52:12.04:692,12,0	1/1:18,26:58:18.06:943,18,0	1/1:10,25:49:6.02:301,6,0	0/0:57,0:57:99:0,132,3690	0/0:36,0:36:66.17:0,66,1502	0/0:21,0:20:30.08:0,30,688	1/1:9,0:18:9.03:237,9,0	0/0:18,0:18:35.90:0,36,876	0/0:30,0:30:66.21:0,66,1809	0/1:17,0:37:0:0,0,0	0/0:30,0:30:51.09:0,51,1176	1/1:11,14:31:8.47:408,8,0	0/1:10,17:29:0:0,0,0	0/0:31,0:31:57.18:0,57,1671	0/1:15,0:41:50.26:154,0,50	0/0:13,0:36:20.76:0,21,91	0/0:7,0:9:9.11:0,9,134
chr10	6366809	.	AT	A	3836.36	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=12.731;DP=696;FS=4.415;HRun=6;HaplotypeScore=66.5024;InbreedingCoeff=0.9989;MQ=77.21;MQ0=0;MQRankSum=-2.405;QD=26.83;ReadPosRankSum=3.821;VQSLOD=4.2316;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:51.17:0,51,670	0/0:11,0:11:30.08:0,30,369	0/0:15,0:15:42.12:0,42,511	0/0:19,0:19:46.87:0,47,530	0/0:31,0:31:93.27:0,93,1182	0/0:24,0:24:72.20:0,72,906	0/0:17,0:17:51.13:0,51,628	0/0:30,0:30:84.25:0,84,1057	0/0:29,0:29:87.25:0,87,1114	0/0:42,0:42:99:0,105,1358	0/0:28,0:28:72.23:0,72,947	1/1:3,24:27:63.16:677,63,0	1/1:4,31:35:81.20:870,81,0	1/1:1,25:26:69.17:742,69,0	0/0:23,0:23:60.17:0,60,761	0/0:20,0:20:60.20:0,60,790	0/0:14,0:14:42.12:0,42,536	0/0:11,0:11:33.09:0,33,418	0/0:27,0:27:78.24:0,78,1012	0/0:38,0:38:99:0,105,1345	0/0:24,0:24:72.20:0,72,915	0/0:34,0:34:93.24:0,93,1153	1/1:2,30:32:81.20:870,81,0	1/1:0,23:23:63.16:677,63,0	0/0:21,0:21:54.15:0,54,683	0/0:38,0:38:99:0,102,1318	0/0:30,0:30:78.22:0,78,981	0/0:7,0:7:21.07:0,21,276
chr10	6368376	.	A	AGT	1311.52	PASS	AB=1.000;AC=29;AF=0.630;AN=46;BaseQRankSum=1.388;DP=160;FS=2.375;HRun=0;HaplotypeScore=173.0950;InbreedingCoeff=0.5897;MQ=28.52;MQ0=0;MQRankSum=-0.908;QD=14.74;ReadPosRankSum=1.185;VQSLOD=3.3683;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:4:3.63:0,4,10	0/0:9,0:9:12.51:0,13,34	./.	./.	0/0:14,0:14:7.83:0,8,23	1/1:3,8:11:15.05:180,15,0	0/0:3,1:4:0.47:0,0,1	0/0:12,0:12:4.38:0,4,9	1/1:2,4:6:8.70:83,9,0	0/0:13,0:13:4.97:0,5,16	0/0:8,0:8:6.95:0,7,21	1/1:0,4:4:8.81:68,9,0	./.	1/1:3,3:6:9.03:102,9,0	1/1:3,2:5:3.01:37,3,0	1/1:4,4:8:15.05:181,15,0	1/1:1,3:4:3.51:42,4,0	0/1:3,0:3:0:0,0,0	0/0:2,1:3:1.77:0,2,4	1/1:6,4:10:9.03:107,9,0	./.	1/1:1,5:6:9.03:105,9,0	1/1:3,2:5:3.01:36,3,0	1/1:1,1:2:3.01:35,3,0	1/1:2,2:4:6.02:73,6,0	1/1:3,5:8:16.09:209,16,0	1/1:1,6:7:17.64:194,18,0	./.
chr10	6368377	.	A	AG	344.86	PASS	AB=0.572;AC=24;AF=0.522;AN=46;BaseQRankSum=6.346;DP=160;FS=11.631;HRun=0;HaplotypeScore=175.3293;InbreedingCoeff=0.4850;MQ=28.52;MQ0=0;MQRankSum=1.059;QD=4.01;ReadPosRankSum=2.241;VQSLOD=2.8947;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:4:5.97:0,6,43	0/0:9,0:9:23.83:0,24,169	./.	./.	0/0:14,0:14:8.74:0,9,68	1/1:3,8:11:14.40:75,14,0	0/0:3,1:4:0.89:0,1,2	0/0:12,0:12:35.62:0,36,239	0/1:2,4:6:1.20:21,0,1	0/0:13,0:13:38.56:0,39,259	0/0:8,0:8:10.32:0,10,71	0/1:0,4:4:2.45:9,0,2	./.	1/1:3,3:6:8.45:40,8,0	1/1:3,2:5:2.88:15,3,0	1/1:4,4:8:11.55:62,12,0	0/1:1,3:4:2.68:3,0,19	0/0:3,0:3:2.98:0,3,21	0/0:2,1:3:5.95:0,6,41	1/1:6,4:10:8.63:44,9,0	./.	1/1:1,5:6:8.56:42,9,0	1/1:3,2:5:2.84:14,3,0	1/1:1,1:2:2.88:15,3,0	1/1:2,2:4:5.75:31,6,0	0/1:3,5:8:17.15:62,0,17	1/1:1,6:7:6.67:67,7,0	./.
chr10	6369049	.	GGGT	G	17496.55	PASS	AB=0.538;AC=37;AF=0.661;AN=56;BaseQRankSum=18.223;DP=710;FS=0.628;HRun=0;HaplotypeScore=188.5193;InbreedingCoeff=0.9196;MQ=86.39;MQ0=0;MQRankSum=-12.370;QD=36.99;ReadPosRankSum=4.985;VQSLOD=5.4330;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,150,3196	0/0:13,0:13:39.13:0,39,871	0/0:29,0:29:80.30:0,80,1620	0/0:28,0:28:78.24:0,78,1569	0/0:25,0:25:69.24:0,69,1540	1/1:2,12:14:30.10:488,30,0	1/1:2,18:20:45.15:734,45,0	1/1:7,25:32:69.23:1126,69,0	1/1:1,35:36:84.29:1370,84,0	0/0:22,0:22:66.23:0,66,1463	0/0:14,0:14:42.14:0,42,936	1/1:3,18:21:54.18:882,54,0	1/1:5,27:32:72.25:1175,72,0	1/1:2,20:22:54.18:868,54,0	1/1:4,33:37:78.27:1273,78,0	1/1:3,30:33:87.30:1419,87,0	1/1:2,41:43:99:1813,111,0	0/0:21,0:21:63.22:0,63,1406	1/1:5,15:20:45.10:653,45,0	1/1:0,16:16:36.12:564,36,0	0/0:33,0:33:87.30:0,87,1944	1/1:0,13:13:33.11:539,33,0	1/1:3,17:20:39.13:631,39,0	1/1:1,29:30:60.20:979,60,0	1/1:1,19:20:42.14:673,42,0	0/1:3,18:21:73.93:792,0,74	1/1:1,29:30:72.25:1176,72,0	1/1:0,13:13:21.07:343,21,0
chr10	6369337	.	CTT	C	29049.51	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=0.638;DP=692;FS=7.610;HRun=2;HaplotypeScore=101.4375;InbreedingCoeff=0.9999;MQ=87.47;MQ0=0;MQRankSum=-11.424;QD=45.04;ReadPosRankSum=7.622;VQSLOD=3.9687;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,43:43:99:1956,120,0	1/1:0,13:13:36.12:587,36,0	0/0:28,0:28:84.29:0,84,1660	0/0:19,0:19:57.19:0,57,1093	1/1:0,24:24:66.23:1076,66,0	1/1:0,34:34:93.32:1515,93,0	1/1:0,25:25:69.24:1125,69,0	1/1:0,30:30:81.28:1311,81,0	1/1:0,23:23:66.23:1076,66,0	1/1:0,26:26:78.27:1271,78,0	1/1:0,21:21:60.20:978,60,0	1/1:0,20:20:57.19:929,57,0	1/1:0,24:24:72.25:1170,72,0	1/1:0,16:16:42.14:684,42,0	1/1:0,26:26:69.24:1125,69,0	1/1:0,16:16:45.15:734,45,0	1/1:0,42:42:99:2006,123,0	1/1:0,21:21:57.19:929,57,0	1/1:0,19:19:57.18:906,57,0	1/1:0,26:26:66.23:1074,66,0	1/1:2,37:39:99:1689,105,0	1/1:0,26:26:66.23:1076,66,0	1/1:0,19:19:45.15:734,45,0	1/1:0,24:24:66.23:1076,66,0	1/1:0,24:24:66.23:1076,66,0	1/1:0,23:23:69.22:1089,69,0	1/1:0,23:23:66.23:1075,66,0	1/1:0,18:18:48.16:783,48,0
chr10	6369581	.	TA	T	12929.13	PASS	AB=0.929;AC=51;AF=0.911;AN=56;BaseQRankSum=3.681;DP=655;FS=9.929;HRun=10;HaplotypeScore=92.9472;InbreedingCoeff=0.8254;MQ=72.14;MQ0=0;MQRankSum=-3.973;QD=21.37;ReadPosRankSum=6.089;VQSLOD=4.5454;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,22:24:65.98:573,66,0	1/1:4,7:12:16.94:127,17,0	0/0:15,1:16:13.01:0,13,341	0/1:12,0:13:4.90:5,0,99	1/1:5,34:39:83.95:729,84,0	1/1:4,20:24:59.98:521,60,0	1/1:3,16:19:47.99:417,48,0	0/0:32,0:34:71.07:0,71,790	1/1:0,19:19:53.99:469,54,0	1/1:3,30:33:89.96:777,90,0	1/1:0,20:20:56.98:495,57,0	1/1:5,22:27:68.97:598,69,0	1/1:3,17:20:50.98:443,51,0	1/1:1,20:21:56.99:495,57,0	1/1:3,25:29:68.02:579,68,0	1/1:2,12:14:29.99:260,30,0	1/1:2,24:26:65.98:573,66,0	1/1:1,22:23:65.98:573,66,0	1/1:2,15:17:44.97:385,45,0	1/1:2,37:39:99:885,102,0	1/1:6,9:15:26.99:234,27,0	1/1:3,22:25:59.98:521,60,0	1/1:2,24:26:68.89:599,69,0	1/1:3,18:21:50.98:443,51,0	1/1:0,18:18:50.99:443,51,0	1/1:4,29:33:83.94:724,84,0	1/1:5,32:35:89.94:774,90,0	1/1:0,11:11:32.99:287,33,0
chr10	6369946	.	TG	T	759.32	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=13.378;DP=565;FS=6.886;HRun=4;HaplotypeScore=99.6368;InbreedingCoeff=0.9739;MQ=84.08;MQ0=0;MQRankSum=-12.002;QD=6.78;ReadPosRankSum=0.542;VQSLOD=-0.0529;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:9,16:25:36.72:170,37,0	1/1:5,5:10:17.16:91,17,0	0/0:21,0:21:49.80:0,50,682	0/0:23,0:23:56.91:0,57,729	1/1:8,21:29:52.19:228,52,0	0/0:30,0:30:87.29:0,87,1205	0/0:24,0:24:72.21:0,72,953	0/0:25,0:25:69.22:0,69,931	0/0:18,0:18:48.12:0,48,646	1/1:6,11:17:35.29:223,35,0	1/1:7,11:18:33.05:152,33,0	0/0:22,0:22:57.19:0,57,791	0/0:28,0:28:75.17:0,75,1001	0/0:18,0:18:48.13:0,48,634	0/0:27,0:27:69.21:0,69,928	0/0:16,0:16:39.13:0,39,542	0/0:14,0:14:42.14:0,42,583	1/1:2,3:5:8.74:49,9,0	0/0:20,0:20:51.14:0,51,676	0/0:33,0:33:96.31:0,96,1316	1/1:5,3:8:8.39:38,8,0	0/0:15,0:15:42.11:0,42,536	0/0:20,0:20:57.18:0,57,775	0/0:17,0:17:42.11:0,42,550	0/0:25,0:25:66.01:0,66,868	0/0:22,3:25:25.72:0,26,832	0/0:24,0:23:72.23:0,72,981	0/0:8,0:8:24.08:0,24,334
chr10	6369951	.	C	CATA	3603.92	PASS	AB=0.889;AC=15;AF=0.268;AN=56;BaseQRankSum=13.430;DP=523;FS=7.835;HRun=0;HaplotypeScore=104.3562;InbreedingCoeff=0.8840;MQ=87.20;MQ0=0;MQRankSum=-11.993;QD=33.68;ReadPosRankSum=0.131;VQSLOD=3.7160;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,16:19:45.15:764,45,0	1/1:0,5:5:15.05:259,15,0	0/0:21,0:21:25.98:0,26,986	0/0:24,0:24:66.07:0,66,1121	1/1:3,21:24:57.19:938,57,0	0/0:30,0:30:90.31:0,90,1678	0/0:26,0:26:75.26:0,75,1390	0/0:24,0:24:69.24:0,69,1283	0/0:16,0:16:48.16:0,48,895	1/1:3,11:14:36.12:687,36,0	1/1:2,11:13:36.10:586,36,0	0/0:19,0:19:57.20:0,57,1063	0/0:25,0:25:72.25:0,72,1342	0/0:15,0:15:45.15:0,45,836	0/0:25,0:25:69.24:0,69,1279	0/0:14,0:14:39.13:0,39,727	0/0:15,0:15:45.15:0,45,839	1/1:1,3:4:9:129,9,0	0/0:19,0:19:54.19:0,54,1007	0/0:33,0:33:96.33:0,96,1790	1/1:1,3:4:9.03:151,9,0	0/0:18,0:18:54.17:0,54,963	0/0:19,0:19:57.20:0,57,1063	0/0:16,0:16:42.14:0,42,783	0/0:24,0:24:69.24:0,69,1266	0/1:21,3:24:90.37:90,0,1102	0/0:25,0:24:72.25:0,72,1337	0/0:8,0:8:24.08:0,24,447
chr10	6370177	.	CAAA	C	6319.53	PASS	AB=0.690;AC=47;AF=0.839;AN=56;BaseQRankSum=-5.200;DP=560;FS=0.763;HRun=16;HaplotypeScore=125.5104;InbreedingCoeff=0.3346;MQ=74.97;MQ0=8;MQRankSum=-2.158;QD=12.95;ReadPosRankSum=2.408;VQSLOD=2.8181;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,0:22:43.92:262,44,0	1/1:3,0:12:26.41:158,26,0	0/1:63,0:25:9.65:10,0,147	0/0:59,1:35:34.89:0,35,324	1/1:4,0:21:49.91:299,50,0	1/1:5,10:16:30.95:330,31,0	1/1:8,3:14:11.77:147,12,0	1/1:4,16:21:50.84:512,51,0	1/1:2,12:16:41.95:437,42,0	1/1:9,0:23:35.05:211,35,0	1/1:8,0:21:37.94:224,38,0	0/1:7,2:11:22.07:51,0,22	0/1:4,1:14:14.61:15,0,45	0/1:2,2:10:12.48:56,0,12	1/1:6,11:17:26.91:291,27,0	1/1:2,11:14:32.96:341,33,0	1/1:11,8:24:21.95:266,22,0	1/1:4,0:16:41.17:248,41,0	1/1:5,7:17:32.67:320,33,0	1/1:2,6:9:16.44:191,16,0	1/1:3,0:11:14.63:88,15,0	1/1:4,13:18:38.88:405,39,0	0/1:5,1:14:18.84:19,0,26	0/0:4,0:9:8.45:0,8,21	1/1:6,18:26:53.82:547,54,0	1/1:5,13:23:46.16:437,46,0	1/1:10,9:21:26.45:261,26,0	1/1:2,9:11:17.94:194,18,0
chr10	6370956	.	AG	A	7712.24	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=10.596;DP=462;FS=8.069;HRun=1;HaplotypeScore=175.5338;InbreedingCoeff=0.9631;MQ=86.62;MQ0=0;MQRankSum=-10.728;QD=18.63;ReadPosRankSum=7.374;VQSLOD=4.4818;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,7:9:14.77:96,15,0	1/1:1,12:13:34.72:234,35,0	0/0:19,0:19:54.18:0,54,816	0/0:28,1:29:75.20:0,75,1176	1/1:0,14:14:26.64:175,27,0	1/1:1,16:17:47.46:324,47,0	1/1:0,17:17:45.39:304,45,0	1/1:3,18:21:56.66:420,57,0	1/1:2,17:19:56.45:400,56,0	1/1:2,13:15:41.24:286,41,0	1/1:0,17:17:44.42:295,44,0	1/1:2,14:16:44.64:290,45,0	1/1:0,23:23:68.22:461,68,0	1/1:0,19:19:50.38:337,50,0	1/1:2,27:29:86.11:596,86,0	1/1:1,27:28:81.95:552,82,0	1/1:1,13:14:38.56:260,39,0	1/1:1,13:13:38.65:276,39,0	1/1:0,9:10:29.04:204,29,0	1/1:1,16:17:50.40:344,50,0	1/1:1,7:8:14.82:100,15,0	1/1:1,4:5:11.87:81,12,0	1/1:0,10:10:29.58:195,30,0	1/1:6,12:18:35.48:242,35,0	1/1:0,12:12:32.54:215,33,0	1/1:0,9:9:26.85:198,27,0	1/1:1,32:33:97.40:680,97,0	1/1:0,7:7:20.85:149,21,0
chr10	6370959	.	TTAA	T	13946.90	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=9.585;DP=461;FS=10.417;HRun=0;HaplotypeScore=169.6265;InbreedingCoeff=0.9611;MQ=87.39;MQ0=0;MQRankSum=-11.284;QD=33.85;ReadPosRankSum=7.884;VQSLOD=4.1831;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,7:8:13.28:149,13,0	1/1:0,13:13:33.20:437,33,0	0/0:20,0:20:60.15:0,60,1284	0/0:29,0:29:78.48:0,78,1683	1/1:1,13:14:27.08:320,27,0	1/1:0,16:16:48.15:595,48,0	1/1:2,17:19:53.65:605,54,0	1/1:3,18:21:52.38:671,52,0	1/1:2,17:19:57.18:715,57,0	1/1:1,14:15:42.11:518,42,0	1/1:0,17:17:45.14:549,45,0	1/1:2,14:16:46.17:530,46,0	1/1:0,23:23:69.22:851,69,0	1/1:0,19:19:51.16:625,51,0	1/1:2,27:29:87.27:1087,87,0	1/1:1,27:28:80.98:979,81,0	1/1:2,13:15:42.12:504,42,0	1/1:2,13:13:39.12:496,39,0	1/1:1,9:10:30.06:370,30,0	1/1:1,15:16:48.15:589,48,0	1/1:0,7:7:15.05:184,15,0	1/1:0,4:4:12.04:148,12,0	1/1:0,10:10:30.09:363,30,0	1/1:5,12:17:33.10:408,33,0	1/1:0,12:12:33.10:401,33,0	1/1:0,9:9:27.09:351,27,0	1/1:1,32:33:99:1235,99,0	1/1:0,7:7:21.07:267,21,0
chr10	6370962	.	A	ACT	9625.21	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=9.542;DP=494;FS=13.952;HRun=0;HaplotypeScore=188.7346;InbreedingCoeff=0.9795;MQ=84.07;MQ0=0;MQRankSum=-10.515;QD=21.53;ReadPosRankSum=7.028;VQSLOD=3.8348;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,0:8:14.80:133,15,0	1/1:14,0:14:38.23:314,38,0	0/0:19,0:19:54.03:0,54,765	0/0:28,0:28:74.23:0,74,1098	1/1:16,0:16:29.68:240,30,0	1/1:19,0:19:55.20:452,55,0	1/1:21,0:21:56.64:547,57,0	1/1:26,0:26:66.46:697,66,0	1/1:18,2:21:56.66:417,57,0	1/1:16,0:16:30.11:342,30,0	1/1:17,0:17:44.53:302,45,0	1/1:14,0:14:41.73:300,42,0	1/1:24,0:24:68.45:484,68,0	1/1:21,0:21:53.65:417,54,0	1/1:28,4:33:89.50:689,90,0	1/1:27,0:27:77.38:561,77,0	1/1:14,1:15:44.75:364,45,0	1/1:13,2:13:38.16:307,38,0	1/1:14,0:14:34.68:344,35,0	1/1:17,0:17:47.60:336,48,0	1/1:9,0:9:17.86:126,18,0	1/1:6,0:6:17.93:188,18,0	1/1:11,0:11:29.62:194,30,0	1/1:17,1:18:35.71:288,36,0	1/1:14,0:14:38.71:332,39,0	1/1:10,0:10:29.96:281,30,0	1/1:33,1:34:99:808,100,0	1/1:7,0:7:20.92:162,21,0
chr10	6372580	.	AT	A	19362.32	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=6.340;DP=652;FS=23.906;HRun=1;HaplotypeScore=166.3922;InbreedingCoeff=0.9988;MQ=78.40;MQ0=0;MQRankSum=-10.871;QD=32.00;ReadPosRankSum=4.586;VQSLOD=2.5527;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,26:40:80.96:1120,81,0	1/1:4,6:10:30.07:396,30,0	0/0:27,0:27:72.24:0,72,1144	0/0:20,0:20:42.59:0,43,828	1/1:7,13:20:39.11:515,39,0	1/1:9,14:23:66.22:910,66,0	1/1:2,21:23:65.94:853,66,0	1/1:2,27:29:78.25:1069,78,0	1/1:11,11:22:63.21:851,63,0	1/1:7,13:20:57.18:778,57,0	1/1:7,14:21:51.14:659,51,0	1/1:14,6:20:42.10:548,42,0	1/1:11,20:31:87.27:1180,87,0	1/1:9,14:23:56.99:778,57,0	1/1:18,17:35:93.31:1288,93,0	1/1:7,13:20:51.16:687,51,0	1/1:16,5:21:41.79:549,42,0	1/1:4,9:13:36.12:502,36,0	1/1:7,13:20:45.15:628,45,0	1/1:6,20:26:48.14:638,48,0	1/1:22,12:34:30.08:397,30,0	1/1:6,17:23:54.15:695,54,0	1/1:5,19:24:57.17:752,57,0	1/1:13,11:24:51.15:680,51,0	1/1:6,13:19:45.15:621,45,0	1/1:5,17:22:63.20:854,63,0	1/1:11,17:28:78.24:1049,78,0	1/1:9,5:14:27.09:368,27,0
chr10	6372585	.	A	AG	18839.55	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=5.772;DP=674;FS=17.961;HRun=2;HaplotypeScore=172.1600;InbreedingCoeff=0.9971;MQ=76.66;MQ0=0;MQRankSum=-10.848;QD=30.00;ReadPosRankSum=4.844;VQSLOD=2.6472;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:23,23:46:84.12:1089,84,0	1/1:4,5:9:24.08:342,24,0	0/0:23,0:23:66.17:0,66,785	0/0:23,0:23:62.36:0,62,683	1/1:6,15:21:36.12:507,36,0	1/1:11,14:25:60.20:851,60,0	1/1:3,20:23:57.19:785,57,0	1/1:1,35:36:96.31:1337,96,0	1/1:11,10:22:63.21:872,63,0	1/1:10,12:22:60.20:854,60,0	1/1:5,13:18:42.12:565,42,0	1/1:13,8:21:36.12:513,36,0	1/1:15,15:30:78.22:1049,78,0	1/1:13,13:26:60.17:819,60,0	1/1:20,17:37:90.17:1214,90,0	1/1:9,10:19:42.05:549,42,0	1/1:16,4:20:36.12:515,36,0	1/1:6,9:15:36.12:511,36,0	1/1:12,15:27:54.17:759,54,0	1/1:4,22:26:51.13:696,51,0	1/1:26,5:31:24.08:340,24,0	1/1:6,18:24:57.16:758,57,0	1/1:4,19:24:48.16:665,48,0	1/1:13,10:23:42.09:550,42,0	1/1:9,12:21:45.13:606,45,0	1/1:6,14:20:48.16:684,48,0	1/1:14,14:27:75.24:1033,75,0	1/1:10,4:14:27.09:378,27,0
chr10	6372784	.	CAAG	C	24904.16	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=1.072;DP=693;FS=10.957;HRun=0;HaplotypeScore=129.0189;InbreedingCoeff=0.9918;MQ=90.81;MQ0=0;MQRankSum=-11.904;QD=39.59;ReadPosRankSum=8.302;VQSLOD=4.8152;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,32:34:90.30:1428,90,0	1/1:1,8:9:15.05:245,15,0	0/0:34,0:34:78.27:0,78,1589	0/0:29,0:30:77.16:0,77,1370	1/1:1,19:20:54.01:817,54,0	1/1:1,24:25:51.09:799,51,0	1/1:1,20:21:45.15:734,45,0	1/1:2,23:25:66.07:936,66,0	1/1:2,22:24:54.18:880,54,0	1/1:0,22:22:63.18:999,63,0	1/1:0,26:26:75.15:1159,75,0	1/1:0,20:20:57.11:898,57,0	1/1:3,29:32:81.28:1321,81,0	1/1:1,32:33:78.18:1240,78,0	1/1:6,31:37:84.11:1305,84,0	1/1:0,17:17:45.15:734,45,0	1/1:1,17:18:45.15:734,45,0	1/1:0,23:23:60.20:979,60,0	1/1:1,15:16:42.11:631,42,0	1/1:2,30:32:84.18:1322,84,0	1/1:0,28:28:78.27:1261,78,0	1/1:0,26:26:72.24:1138,72,0	1/1:3,19:22:45.15:704,45,0	1/1:1,15:16:42.14:685,42,0	1/1:4,23:28:60.20:959,60,0	1/1:1,22:23:66.15:1022,66,0	1/1:2,34:36:87.21:1387,87,0	1/1:0,16:16:36.12:587,36,0
chr10	6373226	.	ACACACAC	A	22281.62	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=8.831;DP=514;FS=17.510;HRun=0;HaplotypeScore=237.4569;InbreedingCoeff=0.9622;MQ=59.64;MQ0=1;MQRankSum=-8.921;QD=48.97;ReadPosRankSum=6.442;VQSLOD=3.1883;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,26:34:88.44:1532,88,0	1/1:0,3:3:9.03:184,9,0	0/0:39,0:34:95.46:0,95,3109	0/0:20,0:18:54.16:0,54,1766	1/1:4,15:19:44.39:687,44,0	1/1:5,16:21:54.86:1071,55,0	1/1:5,18:23:68.89:1134,69,0	1/1:6,14:20:47.12:980,47,0	1/1:1,21:22:66.23:1353,66,0	1/1:2,18:20:60.19:1204,60,0	1/1:4,12:16:37.67:645,38,0	1/1:3,15:18:51.58:949,52,0	1/1:2,12:14:36.38:804,36,0	1/1:1,15:16:48.16:987,48,0	1/1:4,16:20:60.14:1123,60,0	1/1:4,15:19:55.06:1083,55,0	1/1:7,11:18:37.87:657,38,0	1/1:4,9:13:39.09:757,39,0	1/1:9,12:21:41.80:880,42,0	1/1:4,13:17:45.86:811,46,0	1/1:6,3:9:17.94:276,18,0	1/1:4,14:18:47.32:813,47,0	1/1:3,11:14:38.97:622,39,0	1/1:7,7:14:20.27:345,20,0	1/1:3,12:15:44.93:807,45,0	1/1:9,15:24:59.87:1172,60,0	1/1:6,14:20:55.12:960,55,0	1/1:1,5:7:21.07:446,21,0
chr10	6373239	.	A	AT	9602.20	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=8.309;DP=551;FS=22.956;HRun=0;HaplotypeScore=239.7151;InbreedingCoeff=0.9898;MQ=58.37;MQ0=0;MQRankSum=-9.377;QD=19.17;ReadPosRankSum=2.148;VQSLOD=2.2599;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,26:34:94.53:706,95,0	1/1:2,3:5:14.72:96,15,0	0/0:31,0:27:70.09:0,70,929	0/0:19,0:17:38.55:0,39,454	1/1:4,15:19:46.70:322,47,0	1/1:7,16:23:60.68:480,61,0	1/1:4,18:22:59.32:439,59,0	1/1:11,14:25:66.33:507,66,0	1/1:5,21:26:77.23:578,77,0	1/1:7,18:25:71.48:560,71,0	1/1:7,12:19:46.03:342,46,0	1/1:7,15:22:60.79:418,61,0	1/1:5,12:17:48.96:362,49,0	1/1:0,15:15:44.44:305,44,0	1/1:5,16:21:56.88:424,57,0	1/1:3,15:18:53.44:387,53,0	1/1:10,11:21:49.96:310,50,0	1/1:1,10:14:28.25:203,28,0	1/1:11,12:24:58.06:389,58,0	1/1:3,13:16:45.46:326,45,0	1/1:11,3:14:29.24:187,29,0	1/1:6,14:20:48.97:337,49,0	1/1:6,11:17:46.32:361,46,0	1/1:9,7:16:29.23:203,29,0	1/1:2,12:14:36.21:262,36,0	1/1:8,16:24:63.06:478,63,0	1/1:6,14:20:54.60:385,55,0	1/1:5,5:10:29.89:234,30,0
chr10	6373686	.	T	TCCC	1992.12	PASS	AB=0.910;AC=16;AF=0.286;AN=56;BaseQRankSum=-0.713;DP=430;FS=2.552;HRun=3;HaplotypeScore=145.2415;InbreedingCoeff=-0.2460;MQ=85.36;MQ0=0;MQRankSum=-4.895;QD=9.67;ReadPosRankSum=4.145;VQSLOD=0.5046;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:38:99:0,109,1205	0/0:8,0:8:24.03:0,24,237	0/0:28,0:25:46.80:0,47,834	0/0:25,0:23:33.90:0,34,739	0/0:11,0:11:32.45:0,32,354	0/1:14,2:16:71.56:232,0,72	0/1:20,0:20:99:136,0,196	0/0:15,0:15:35.32:0,35,289	0/1:18,1:19:67.50:167,0,67	0/0:17,0:18:44.50:0,45,492	0/0:15,0:16:44.33:0,44,431	0/1:12,2:14:18.32:240,0,18	0/1:12,3:15:52.90:222,0,53	0/1:19,3:22:65.24:305,0,65	0/1:12,5:16:81.32:224,0,81	0/1:13,1:14:99:119,0,102	0/1:12,3:15:73.07:152,0,73	0/0:11,0:11:30.04:0,30,302	0/1:8,1:9:68.70:69,0,72	0/1:9,0:9:40.89:41,0,45	0/0:28,0:29:65.70:0,66,719	0/1:12,2:14:25.50:112,0,25	0/1:8,0:8:55:55,0,64	1/1:6,0:6:8.23:38,8,0	0/1:8,0:8:14.54:40,0,15	0/0:12,0:13:15.46:0,15,159	0/0:10,0:10:23.37:0,23,115	0/0:2,0:2:5.54:0,6,27
chr10	6373688	.	A	AC	6454.22	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=4.745;DP=436;FS=0.712;HRun=7;HaplotypeScore=121.6311;InbreedingCoeff=0.8903;MQ=83.21;MQ0=0;MQRankSum=-8.843;QD=16.72;ReadPosRankSum=4.099;VQSLOD=3.9353;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,28:38:93.20:1100,93,0	1/1:0,8:8:24.07:289,24,0	0/0:27,0:24:54.20:0,54,516	0/0:23,0:21:40.10:0,40,382	1/1:1,14:15:33.04:361,33,0	1/1:6,0:15:31.41:165,31,0	1/1:13,1:21:37.17:218,37,0	1/1:6,0:15:25.84:132,26,0	1/1:11,0:19:39.78:203,40,0	1/1:3,14:17:48.14:570,48,0	1/1:8,9:17:32.13:368,32,0	1/1:10,0:14:32.39:178,32,0	1/1:7,0:16:34.37:187,34,0	1/1:12,0:23:46.99:240,47,0	1/1:13,0:16:34.07:183,34,0	1/1:7,0:13:26.38:138,26,0	1/1:11,0:15:25.44:148,25,0	1/1:1,10:11:30.09:362,30,0	1/1:7,0:10:14.29:73,14,0	1/1:6,0:10:14.43:84,14,0	1/1:9,19:28:65.83:783,66,0	1/1:10,0:15:24.66:128,25,0	1/1:5,0:9:20.34:121,20,0	1/1:1,0:7:11.47:59,11,0	1/1:1,0:8:11.47:62,11,0	1/1:6,1:12:25.19:142,25,0	1/1:2,0:11:25.88:131,26,0	1/1:0,0:2:5.72:29,6,0
chr10	6374444	.	TCTGAA	T	26232.09	PASS	AB=0.552;AC=37;AF=0.661;AN=56;BaseQRankSum=15.812;DP=728;FS=2.163;HRun=0;HaplotypeScore=153.2955;InbreedingCoeff=0.9156;MQ=85.52;MQ0=2;MQRankSum=-8.893;QD=51.33;ReadPosRankSum=3.164;VQSLOD=5.4772;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:57.20:0,57,1786	0/0:13,0:13:36.12:0,36,1128	0/0:26,0:26:63.15:0,63,1754	0/0:28,0:28:71.03:0,71,1910	0/0:26,0:26:75.24:0,75,2213	1/1:1,28:29:60.21:1255,60,0	1/1:2,20:21:54.18:1119,54,0	1/1:4,17:21:51.14:937,51,0	1/1:2,25:27:66.23:1383,66,0	0/0:41,0:41:99:0,117,3564	0/0:19,0:19:57.19:0,57,1704	1/1:0,19:19:51.17:1061,51,0	1/1:2,19:21:54.19:1123,54,0	1/1:3,25:29:72.25:1503,72,0	1/1:2,39:41:99:2126,102,0	1/1:0,28:28:78.27:1663,78,0	1/1:2,27:29:69.24:1468,69,0	0/0:26,0:26:78.27:0,78,2400	1/1:3,19:21:57.17:1154,57,0	1/1:0,33:33:96.26:1936,96,0	0/0:17,0:17:51.18:0,51,1565	1/1:2,25:27:69.24:1421,69,0	1/1:1,20:21:60.21:1241,60,0	1/1:3,23:26:41.81:870,42,0	1/1:1,32:33:84.29:1766,84,0	0/1:6,26:32:12.78:1523,0,13	1/1:4,44:48:99:2492,117,0	1/1:0,3:3:9.03:192,9,0
chr10	6374579	.	C	CT	6214.13	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-14.698;DP=773;FS=1.015;HRun=7;HaplotypeScore=70.5659;InbreedingCoeff=0.9985;MQ=86.15;MQ0=0;MQRankSum=-0.315;QD=33.59;ReadPosRankSum=1.222;VQSLOD=3.8183;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,39:39:99:1341,111,0	1/1:1,14:15:45.13:533,45,0	0/0:29,0:30:67.81:0,68,633	0/0:25,0:25:60.06:0,60,567	1/1:3,27:30:78.20:925,78,0	0/0:21,0:21:57.05:0,57,538	0/0:20,0:20:60.10:0,60,579	0/0:26,0:26:63.09:0,63,608	0/0:31,0:31:87.12:0,87,833	1/1:1,33:33:96.24:1132,96,0	1/1:1,21:22:63.19:761,63,0	0/0:23,0:23:63.10:0,63,608	0/0:32,0:32:87.09:0,87,829	0/0:31,0:31:87.12:0,87,829	0/0:36,0:36:96.07:0,96,909	0/0:40,0:40:99:0,111,1049	0/0:24,0:24:66.10:0,66,637	1/1:0,17:17:51.16:616,51,0	0/0:21,0:21:51.08:0,51,492	0/0:46,0:46:99:0,123,1154	1/1:1,27:28:75.23:906,75,0	0/0:23,0:23:66.09:0,66,631	0/0:24,0:24:57.07:0,57,544	0/0:30,0:30:81.08:0,81,774	0/0:30,0:30:90.15:0,90,869	0/0:30,1:31:38.86:0,39,655	0/0:37,0:37:99:0,99,944	0/0:7,0:7:18.03:0,18,174
chr10	6374971	.	TTGTGTGTGTGTGTGTGTGTG	T	2287.23	PASS	AB=0.869;AC=15;AF=0.278;AN=54;BaseQRankSum=4.627;DP=642;FS=0.000;HRun=0;HaplotypeScore=270.5145;InbreedingCoeff=0.5714;MQ=64.07;MQ0=31;MQRankSum=-4.072;QD=10.74;ReadPosRankSum=1.843;VQSLOD=2.2013;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:32:15.03:0,15,985	0/0:17,0:15:19.31:0,19,794	0/0:32,0:14:3.01:0,3,36	./.	0/0:14,0:14:9:0,9,482	1/1:14,5:20:18.05:583,18,0	0/1:22,0:22:22.55:41,0,23	0/0:22,0:21:29.69:0,30,599	1/1:14,16:30:5.83:231,6,0	0/0:35,0:34:45.21:0,45,2221	0/0:10,0:10:3.01:0,3,149	0/0:20,0:19:18.05:0,18,464	0/0:17,0:22:45.15:0,45,802	0/0:22,0:28:24.08:0,24,452	1/1:16,12:30:17.50:500,18,0	0/1:17,0:21:99:352,0,122	1/1:16,12:28:11.51:492,12,0	0/0:21,0:21:42.12:0,42,1863	0/0:13,0:12:2.04:0,2,6	1/1:18,0:20:9.02:137,9,0	0/0:34,0:32:15.94:0,16,493	1/1:10,7:17:3.01:67,3,0	0/0:10,0:12:15.05:0,15,370	0/0:28,0:40:35.86:0,36,645	0/1:16,7:23:3.02:56,0,3	0/0:16,0:15:25.64:0,26,770	0/0:10,0:10:6.02:0,6,121	0/0:10,0:10:15.05:0,15,492
chr10	6375008	.	T	TGTGTGG	1593.13	PASS	AB=0.854;AC=13;AF=0.232;AN=56;BaseQRankSum=-0.900;DP=605;FS=0.000;HRun=0;HaplotypeScore=142.7653;InbreedingCoeff=0.6137;MQ=51.32;MQ0=28;MQRankSum=0.946;QD=7.97;ReadPosRankSum=0.956;VQSLOD=2.6532;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:6,0:38:0.99:63,1,0	1/1:11,0:10:12:148,12,0	0/0:8,0:2:3:0,3,26	0/0:23,0:7:11.38:0,11,133	1/1:2,0:16:20.37:264,20,0	0/0:14,0:12:20.85:0,21,207	0/0:30,0:28:53.60:0,54,405	0/0:29,0:24:60.34:0,60,426	0/0:25,0:25:20.86:0,21,178	0/1:22,0:21:11.69:462,0,12	1/1:7,0:7:12.02:130,12,0	0/0:16,0:14:26.35:0,26,201	0/0:26,0:26:27.26:0,27,228	0/0:21,0:21:24.54:0,25,182	0/0:21,0:21:32.40:0,32,251	0/0:23,0:22:53.82:0,54,465	0/0:24,0:24:29.69:0,30,252	1/1:27,0:27:18.59:634,19,0	0/0:13,0:13:34.87:0,35,266	0/0:14,0:13:23.90:0,24,189	0/1:17,28:48:54.86:55,0,118	0/0:18,0:18:32.30:0,32,243	0/0:19,0:19:22.92:0,23,194	0/0:45,0:44:27.65:0,28,275	0/0:16,0:15:17.87:0,18,135	0/1:27,0:27:6.42:6,0,450	0/0:10,0:10:17.94:0,18,144	0/0:9,0:9:26.62:0,27,202
chr10	6375552	.	AACT	A	2595.14	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=0.708;DP=588;FS=1.625;HRun=0;HaplotypeScore=159.2335;InbreedingCoeff=0.9710;MQ=68.57;MQ0=0;MQRankSum=-4.740;QD=37.61;ReadPosRankSum=-2.656;VQSLOD=3.6361;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,105,2206	0/0:11,0:11:33.09:0,33,679	0/0:10,0:10:6.13:0,6,449	0/0:19,0:18:27.82:0,28,689	0/0:20,0:20:60.21:0,60,1244	0/0:23,0:23:60.14:0,60,1171	0/0:24,0:24:66.20:0,66,1405	1/1:3,26:29:78.20:1120,78,0	0/0:22,0:22:57.15:0,57,1167	0/0:25,0:25:75.26:0,75,1569	0/0:11,0:11:33.11:0,33,663	0/0:24,0:24:72.23:0,72,1466	0/0:28,0:28:81.26:0,81,1628	0/0:26,0:26:78.22:0,78,1604	0/0:16,0:16:48.16:0,48,1051	0/0:21,0:21:60.21:0,60,1235	0/0:34,0:34:99:0,102,2182	0/0:17,0:17:48.16:0,48,1030	0/0:21,0:21:63.21:0,63,1261	0/0:16,0:16:45.15:0,45,909	0/0:16,0:16:45.15:0,45,944	0/0:21,0:21:63.22:0,63,1361	0/0:16,0:16:44.87:0,45,856	0/0:36,0:36:99:0,105,2272	0/0:25,0:25:63.21:0,63,1310	1/1:5,12:17:45.04:697,45,0	1/1:2,12:14:33.11:538,33,0	1/1:0,9:9:24.08:400,24,0
chr10	6377871	.	T	TC	4518.89	PASS	AC=46;AF=0.885;AN=52;BaseQRankSum=-0.082;DP=519;FS=9.705;HRun=6;HaplotypeScore=207.0297;InbreedingCoeff=0.6268;MQ=53.19;MQ0=1;MQRankSum=-4.239;QD=10.56;ReadPosRankSum=4.502;VQSLOD=1.7328;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,21:30:57.55:690,58,0	1/1:1,7:8:18.06:225,18,0	0/0:31,0:21:29.06:0,29,353	0/0:24,0:19:47.09:0,47,449	1/1:2,15:17:36.12:452,36,0	1/1:18,0:23:6.14:28,6,0	1/1:12,0:15:7.05:26,7,0	1/1:17,0:23:18.85:102,19,0	1/1:21,0:23:11.33:69,11,0	1/1:1,14:15:42.13:523,42,0	1/1:3,18:21:45.14:563,45,0	1/1:11,0:10:4.78:25,5,0	1/1:15,0:19:24.88:164,25,0	0/0:15,0:16:1.55:0,2,5	1/1:19,0:29:2.42:12,2,0	1/1:12,0:17:5.80:39,6,0	1/1:7,0:9:7.73:38,8,0	1/1:1,8:9:18.06:226,18,0	1/1:10,0:11:21.03:122,21,0	1/1:22,0:23:2.21:10,2,0	1/1:1,17:18:42.13:527,42,0	1/1:15,0:20:0.45:1,0,0	./.	./.	1/1:21,0:28:7.40:39,7,0	1/1:12,1:15:35.03:235,35,0	1/1:20,0:22:44.44:290,44,0	1/1:13,0:13:19.49:113,19,0
chr10	6377872	.	C	CT	3846.43	PASS	AB=0.992;AC=44;AF=0.846;AN=52;BaseQRankSum=5.527;DP=494;FS=4.897;HRun=1;HaplotypeScore=196.8934;InbreedingCoeff=0.2679;MQ=55.70;MQ0=1;MQRankSum=-6.277;QD=9.22;ReadPosRankSum=6.549;VQSLOD=1.5159;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:29,1:30:62.39:168,0,62	1/1:8,0:8:16.48:72,16,0	0/0:34,0:23:31.74:0,32,502	0/0:27,0:21:51.42:0,51,576	0/1:17,0:17:21.36:107,0,21	1/1:5,17:22:7.36:63,7,0	1/1:4,11:15:6.95:62,7,0	1/1:11,6:15:38.84:371,39,0	1/1:2,19:22:14.83:157,15,0	1/1:15,0:15:13.13:121,13,0	0/1:21,0:21:4.79:133,0,5	1/1:0,9:8:6:61,6,0	1/1:4,14:18:32.97:374,33,0	1/1:1,15:16:2.68:21,3,0	1/1:10,17:27:2.63:31,3,0	1/1:5,11:16:8.99:98,9,0	1/1:3,5:8:9.01:92,9,0	0/1:10,0:10:7.54:47,0,8	1/1:4,7:9:27:308,27,0	1/1:2,18:20:5.50:47,6,0	1/1:18,0:18:16.51:141,17,0	1/1:6,13:20:3.45:26,3,0	./.	./.	1/1:8,20:27:7.57:75,8,0	1/1:5,9:13:36.08:445,36,0	1/1:4,18:22:48.29:575,48,0	1/1:3,9:10:22.29:251,22,0
chr10	6377882	.	TC	T	1686.92	PASS	AB=0.976;AC=27;AF=0.500;AN=54;BaseQRankSum=12.039;DP=543;FS=0.000;HRun=4;HaplotypeScore=229.2776;InbreedingCoeff=0.6958;MQ=59.01;MQ0=1;MQRankSum=-12.409;QD=5.66;ReadPosRankSum=0.934;VQSLOD=-0.3883;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:56.34:0,56,774	0/0:8,0:8:18.06:0,18,238	0/0:36,0:25:67.09:0,67,864	0/0:29,0:25:25.89:0,26,667	0/0:17,0:17:48.16:0,48,671	1/1:22,0:22:3.19:24,3,0	1/1:17,0:17:1.22:3,1,0	1/1:20,0:17:35.36:261,35,0	1/1:27,0:27:14.39:90,14,0	0/0:21,0:21:51.16:0,51,676	0/0:21,0:21:51.16:0,51,692	1/1:8,1:8:5.91:54,6,0	1/1:17,1:18:24.83:206,25,0	0/1:21,1:22:0.01:42,0,0	0/1:32,1:33:0.18:0,0,1	1/1:18,0:18:5.61:39,6,0	1/1:11,0:11:14.85:115,15,0	0/0:10,0:10:24.08:0,24,333	1/1:17,0:15:35.75:273,36,0	0/0:25,1:26:0.94:0,1,1	0/0:18,0:18:48.14:0,48,649	0/0:20,0:20:2.74:0,3,12	./.	0/0:3,0:3:0:0,0,0	1/1:31,0:30:4.20:24,4,0	0/1:14,0:13:6.14:226,0,6	1/1:26,0:26:51.48:380,51,0	1/1:13,0:11:19.97:133,20,0
chr10	6377883	.	C	CT	2486.31	PASS	AC=30;AF=0.556;AN=54;BaseQRankSum=12.410;DP=512;FS=1.572;HRun=1;HaplotypeScore=217.1380;InbreedingCoeff=0.7473;MQ=61.69;MQ0=1;MQRankSum=-11.843;QD=9.31;ReadPosRankSum=0.845;VQSLOD=1.4130;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,1:22:55.38:0,55,734	0/0:8,0:8:19.61:0,20,236	0/0:37,0:26:54.14:0,54,834	0/0:30,0:25:59.35:0,59,777	0/0:17,0:17:49.71:0,50,654	1/1:13,6:19:3.21:44,3,0	1/1:5,11:16:2.77:7,3,0	1/1:16,1:16:35.85:295,36,0	1/1:15,10:25:14.70:159,15,0	0/0:21,0:21:52.72:0,53,674	0/0:22,0:22:49.42:0,49,670	1/1:6,1:7:5.92:66,6,0	1/1:8,8:16:26.64:296,27,0	1/1:15,4:20:4.70:83,5,0	1/1:18,14:32:0.95:4,1,0	1/1:10,7:17:7.34:88,7,0	1/1:10,2:12:15.32:153,15,0	0/0:10,0:10:24.08:0,24,324	1/1:12,1:13:35.81:313,36,0	0/0:21,5:26:0.94:0,1,2	0/0:18,0:18:48.14:0,48,625	0/0:13,6:19:2.21:0,2,11	./.	0/0:2,0:2:0:0,0,0	1/1:19,10:29:5.69:71,6,0	1/1:7,5:12:0.57:349,1,0	1/1:14,9:23:53.99:585,54,0	1/1:7,1:8:20.30:162,20,0
chr10	6377886	.	CT	C	4463.09	PASS	AB=0.667;AC=37;AF=0.661;AN=56;BaseQRankSum=13.828;DP=524;FS=13.671;HRun=1;HaplotypeScore=217.8194;InbreedingCoeff=0.8528;MQ=65.07;MQ0=1;MQRankSum=-13.383;QD=13.28;ReadPosRankSum=-5.620;VQSLOD=1.1750;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:40.19:0,40,807	0/0:7,0:7:18.06:0,18,253	0/0:38,0:28:60.57:0,61,1006	0/0:30,0:24:51.79:0,52,770	0/0:16,0:16:48.16:0,48,751	1/1:9,12:21:42.84:274,43,0	1/1:12,4:16:6.34:37,6,0	1/1:3,12:14:41.77:532,42,0	1/1:10,15:25:43.48:340,43,0	0/0:21,0:21:57.17:0,57,847	0/0:21,0:21:57.16:0,57,843	1/1:2,5:7:14.78:115,15,0	1/1:9,7:16:21.79:204,22,0	1/1:7,14:21:27.27:229,27,0	1/1:15,14:29:23.32:155,23,0	1/1:9,10:19:34.57:250,35,0	1/1:4,9:13:29.65:286,30,0	0/0:11,0:11:27.06:0,27,397	1/1:3,12:14:42.10:526,42,0	1/1:10,18:28:14.46:113,14,0	0/0:19,0:19:51.14:0,51,749	1/1:6,13:19:11.79:75,12,0	1/1:4,10:14:5.97:47,6,0	1/1:2,2:4:2.97:20,3,0	1/1:10,19:29:45.40:281,45,0	0/1:6,6:12:24.32:235,0,24	1/1:12,13:25:51.99:508,52,0	1/1:2,6:8:22.55:236,23,0
chr10	6377922	.	TC	T	3651.14	PASS	AB=0.605;AC=33;AF=0.589;AN=56;BaseQRankSum=12.588;DP=546;FS=13.815;HRun=1;HaplotypeScore=174.8483;InbreedingCoeff=0.6048;MQ=82.65;MQ0=3;MQRankSum=-11.197;QD=11.97;ReadPosRankSum=7.909;VQSLOD=0.4729;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:69.20:0,69,1043	0/0:10,0:10:30.08:0,30,424	0/0:42,0:30:70.19:0,70,944	0/0:60,0:43:91.68:0,92,1237	0/0:16,0:16:45.12:0,45,661	1/1:5,14:19:34.44:256,34,0	1/1:0,9:9:26.21:147,26,0	1/1:4,18:22:12.83:300,13,0	0/1:5,12:17:6.69:154,0,7	0/0:30,0:30:90.30:0,90,1379	0/0:26,0:26:78.26:0,78,1217	1/1:0,5:5:14.60:86,15,0	0/1:11,8:19:28.57:117,0,29	1/1:4,19:22:42.40:276,42,0	1/1:2,15:17:32.33:233,32,0	1/1:3,16:19:53.01:345,53,0	1/1:5,11:16:14.23:173,14,0	0/0:15,0:15:39.13:0,39,575	0/1:6,10:15:63.59:111,0,64	1/1:5,18:23:12.03:233,12,0	0/0:18,0:18:48.16:0,48,767	1/1:3,16:19:13.74:222,14,0	1/1:1,15:16:37.05:244,37,0	1/1:0,7:7:17.22:94,17,0	0/1:4,14:18:44.32:154,0,44	0/1:3,12:15:98.18:173,0,98	1/1:3,15:18:3.50:223,4,0	1/1:0,7:7:20.29:111,20,0
chr10	6377924	.	TC	T	3782.23	PASS	AB=0.613;AC=33;AF=0.589;AN=56;BaseQRankSum=12.038;DP=554;FS=8.591;HRun=1;HaplotypeScore=175.8600;InbreedingCoeff=0.6273;MQ=79.99;MQ0=3;MQRankSum=-11.515;QD=12.01;ReadPosRankSum=6.898;VQSLOD=1.8161;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:69.21:0,69,1056	0/0:10,0:10:30.10:0,30,437	0/0:42,0:30:57.29:0,57,850	0/0:60,0:42:87.54:0,88,1217	0/0:16,0:16:48.13:0,48,693	1/1:6,14:20:37.91:261,38,0	1/1:0,9:9:26.21:147,26,0	1/1:5,18:23:20.91:309,21,0	0/1:6,12:18:3.90:154,0,4	0/0:30,0:30:90.28:0,90,1355	0/0:26,0:26:78.26:0,78,1217	1/1:0,5:5:14.60:86,15,0	0/1:11,8:19:39.63:97,0,40	1/1:5,19:23:45.95:282,46,0	1/1:3,15:18:38.09:261,38,0	1/1:4,16:20:50.92:326,51,0	1/1:5,11:16:11.74:171,12,0	0/0:14,0:14:36.12:0,36,537	0/1:6,10:15:62.79:131,0,63	1/1:6,18:24:29.18:256,29,0	0/0:18,0:18:48.16:0,48,768	1/1:4,16:20:22.19:271,22,0	1/1:1,15:16:37.35:244,37,0	1/1:0,7:7:17.22:93,17,0	0/1:5,14:19:26.36:181,0,26	0/1:4,12:16:98.43:175,0,98	1/1:3,15:18:5.95:226,6,0	1/1:0,7:7:20.29:111,20,0
chr10	6380922	.	CGTGTGTGTGTGT	C	3783.05	PASS	AB=0.674;AC=28;AF=0.519;AN=54;BaseQRankSum=2.491;DP=702;FS=0.000;HRun=0;HaplotypeScore=239.3948;InbreedingCoeff=0.4081;MQ=52.46;MQ0=19;MQRankSum=-6.288;QD=9.55;ReadPosRankSum=0.195;VQSLOD=2.3117;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:44:57.17:0,57,1803	0/0:3,0:8:15.52:0,16,384	./.	0/0:37,0:20:0:0,0,0	0/0:17,0:25:18.52:0,19,404	1/1:14,18:32:0.59:313,1,0	1/1:9,13:22:5.59:140,6,0	0/0:24,0:28:24.04:0,24,334	1/1:7,7:12:8.58:290,9,0	0/0:20,0:31:48.12:0,48,974	0/0:5,0:13:18.06:0,18,480	1/1:9,12:21:15.05:497,15,0	1/1:12,8:22:1.10:306,1,0	1/1:9,7:14:3.44:105,3,0	1/1:11,11:22:12.04:394,12,0	1/1:9,0:13:9.03:226,9,0	0/1:15,8:21:45.01:95,0,45	0/1:11,0:20:8.56:9,0,629	1/1:19,8:27:22.62:573,23,0	0/1:7,10:18:0:0,0,1	0/0:48,0:55:57.14:0,57,1243	1/1:18,5:23:5.43:312,5,0	1/1:13,12:24:2.81:56,3,0	0/1:13,18:29:12.97:198,0,13	0/1:12,14:28:17.35:265,0,17	0/1:22,0:36:2.40:2,0,552	0/0:19,0:28:13.95:0,14,241	0/0:2,0:4:1.23:0,1,78
chr10	6384531	.	C	CTA	15241.06	PASS	AB=0.542;AC=29;AF=0.518;AN=56;BaseQRankSum=-13.308;DP=679;FS=2.070;HRun=0;HaplotypeScore=64.9601;InbreedingCoeff=0.7808;MQ=53.23;MQ0=76;MQRankSum=-2.918;QD=38.20;ReadPosRankSum=1.654;VQSLOD=6.6460;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:5,33:32:13.05:1432,0,13	1/1:3,8:8:21.07:426,21,0	0/0:23,0:13:39.13:0,39,610	0/0:24,0:13:29.97:0,30,423	1/1:3,31:33:54.19:1094,54,0	0/0:32,0:23:51.13:0,51,802	0/0:13,0:11:30.10:0,30,489	1/1:5,20:6:15.05:305,15,0	0/0:20,0:16:39.13:0,39,636	1/1:6,26:23:66.22:1294,66,0	1/1:1,21:21:48.16:973,48,0	1/1:1,15:15:42.14:848,42,0	1/1:1,15:16:33.11:669,33,0	1/1:1,26:26:63.22:1270,63,0	0/0:17,0:14:24.08:0,24,391	0/0:24,0:18:39.13:0,39,636	0/0:24,0:17:36.12:0,36,587	0/1:5,22:27:99:1027,0,159	0/0:16,0:7:21.07:0,21,343	0/0:35,0:27:75.25:0,75,1201	1/1:2,26:23:66.23:1340,66,0	0/0:25,0:20:54.18:0,54,860	1/1:1,19:16:48.16:974,48,0	0/1:3,17:17:55.77:689,0,56	0/0:26,0:21:54.18:0,54,881	1/1:3,29:26:75.26:1501,75,0	1/1:8,27:27:57.19:1155,57,0	1/1:2,6:6:12.04:244,12,0
chr10	6385791	.	GGTT	G	114.41	PASS	AB=0.965;AC=13;AF=0.232;AN=56;BaseQRankSum=1.301;DP=397;FS=11.211;HRun=0;HaplotypeScore=99.6170;InbreedingCoeff=-0.1683;MQ=54.69;MQ0=13;MQRankSum=-2.350;QD=1.13;ReadPosRankSum=4.043;VQSLOD=0.8991;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:10:15.77:0,16,91	0/0:5,0:5:12.47:0,12,64	0/0:85,0:20:11.30:0,11,350	0/0:87,0:23:27.56:0,28,377	0/0:11,0:10:9.11:0,9,105	0/1:12,1:13:20.62:21,0,103	0/0:1,0:1:3:0,3,25	0/1:9,0:9:1.52:2,0,64	0/1:4,1:5:15.07:15,0,61	0/1:6,0:6:4.55:5,0,12	0/0:9,0:9:1.16:0,1,59	0/1:11,0:10:35.58:36,0,50	0/0:12,0:12:14.42:0,14,78	0/0:10,0:10:0.12:0,0,105	0/1:7,0:7:21.52:22,0,31	0/1:8,0:8:20.48:23,0,20	0/0:9,0:9:7.47:0,7,59	0/0:5,0:5:0.96:0,1,24	0/1:13,1:13:25.17:25,0,122	0/1:11,0:11:63.99:64,0,88	0/0:8,0:8:11.87:0,12,82	0/0:6,0:5:5.34:0,5,43	0/0:2,0:2:4.26:0,4,12	1/1:2,1:3:5.47:30,5,0	0/1:8,0:8:6.30:6,0,23	0/0:19,0:19:22.50:0,22,157	0/0:14,0:14:26.14:0,26,158	0/1:5,0:5:1.47:1,0,9
chr10	6385792	.	GTT	G	1452.26	PASS	AB=0.890;AC=48;AF=0.889;AN=54;BaseQRankSum=-0.082;DP=400;FS=3.339;HRun=13;HaplotypeScore=91.4728;InbreedingCoeff=0.4393;MQ=54.31;MQ0=17;MQRankSum=-1.028;QD=6.60;ReadPosRankSum=4.138;VQSLOD=0.6063;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:12,0:10:0.09:1,0,0	1/1:4,0:4:4.33:19,4,0	0/0:85,0:20:10.94:0,11,198	0/0:92,0:23:27.23:0,27,217	0/1:9,0:10:7.64:8,0,25	1/1:12,0:13:12.53:74,13,0	./.	1/1:8,0:9:16.47:77,16,0	1/1:5,0:5:5.60:29,6,0	1/1:4,0:6:8:39,8,0	1/1:8,0:9:11.77:57,12,0	1/1:10,0:10:21.27:131,21,0	1/1:10,2:12:28.97:193,29,0	1/1:7,2:9:14.51:93,15,0	1/1:5,2:7:14.43:91,14,0	1/1:6,1:8:20.28:123,20,0	1/1:4,3:8:11.51:82,12,0	1/1:5,0:5:7.28:31,7,0	0/1:13,1:13:19.15:68,0,19	1/1:8,4:11:17.38:108,17,0	1/1:8,0:8:0.43:1,0,0	1/1:4,2:5:11.46:60,11,0	1/1:2,0:2:4.97:17,5,0	1/1:2,1:3:5.78:31,6,0	1/1:8,0:8:17.35:106,17,0	1/1:17,0:19:19.87:78,20,0	1/1:13,0:14:5.52:33,6,0	1/1:4,0:5:9.82:37,10,0
chr10	6385801	.	T	TGG	1512.33	PASS	AB=0.960;AC=25;AF=0.446;AN=56;BaseQRankSum=3.639;DP=438;FS=1.185;HRun=0;HaplotypeScore=105.4980;InbreedingCoeff=0.4003;MQ=46.94;MQ0=22;MQRankSum=-3.779;QD=10.88;ReadPosRankSum=3.173;VQSLOD=3.2781;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,3:10:11.93:126,12,0	1/1:1,2:4:12.01:126,12,0	0/0:106,0:18:29.20:0,29,336	0/0:110,0:20:19.11:0,19,285	0/1:4,2:8:31.25:31,0,36	0/0:11,0:11:17.05:0,17,134	0/0:1,0:1:1.55:0,2,4	0/1:7,1:12:1.48:170,0,1	0/1:2,0:2:1.13:4,0,1	1/1:4,2:6:8.11:95,8,0	1/1:5,4:9:7.05:123,7,0	0/1:12,0:11:20.62:21,0,79	0/1:12,0:12:10.11:10,0,82	0/0:10,0:10:25.59:0,26,176	0/0:8,0:8:14.12:0,14,115	0/0:8,0:8:12.58:0,13,76	0/1:12,0:12:21.36:21,0,70	1/1:2,3:5:8.32:85,8,0	0/0:11,0:10:12.56:0,13,111	0/0:13,0:12:3.78:0,4,169	0/1:6,0:6:18.89:19,0,31	0/0:6,0:5:7:0,7,38	1/1:2,0:2:3.47:10,3,0	0/0:4,0:4:4.25:0,4,32	0/0:10,0:10:3.77:0,4,80	1/1:12,5:18:12.81:347,13,0	1/1:5,7:13:22.10:320,22,0	1/1:2,4:6:17.69:188,18,0
chr10	6385802	.	T	TGGG	4847.95	PASS	AB=0.903;AC=41;AF=0.732;AN=56;BaseQRankSum=4.677;DP=425;FS=0.612;HRun=0;HaplotypeScore=95.7729;InbreedingCoeff=0.0847;MQ=48.24;MQ0=22;MQRankSum=-2.045;QD=23.76;ReadPosRankSum=6.012;VQSLOD=4.6933;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:9:12.04:179,12,0	1/1:4,0:4:12.04:183,12,0	0/0:109,0:19:18.37:0,18,346	0/0:108,0:21:23.95:0,24,394	0/1:8,0:8:41.84:42,0,45	0/1:9,1:10:61.85:91,0,62	1/1:1,0:1:3.01:36,3,0	1/1:11,0:11:27.34:272,27,0	1/1:1,1:2:6.01:73,6,0	1/1:6,0:6:11.90:142,12,0	1/1:9,0:9:26.21:302,26,0	1/1:10,2:11:2.94:229,3,0	1/1:8,4:12:8.89:395,9,0	0/1:8,0:8:19.09:149,0,19	0/1:4,2:6:16.04:115,0,16	1/1:5,3:8:15.86:284,16,0	0/1:10,2:12:1.56:194,0,2	1/1:4,0:4:8.06:106,8,0	0/1:9,2:10:34.85:261,0,35	0/1:13,1:13:33.06:158,0,33	0/0:4,0:4:3.01:0,3,45	1/1:6,0:5:11.05:151,11,0	1/1:0,2:2:6.02:114,6,0	0/1:4,0:4:5.20:44,0,5	0/1:8,2:10:55.99:261,0,56	1/1:15,1:16:26.87:421,27,0	1/1:11,0:11:20.31:392,20,0	1/1:6,0:6:18.02:255,18,0
chr10	6385805	.	T	TGGGGGG	8098.56	PASS	AB=0.995;AC=52;AF=0.929;AN=56;BaseQRankSum=0.529;DP=447;FS=1.983;HRun=8;HaplotypeScore=110.3562;InbreedingCoeff=0.2607;MQ=48.20;MQ0=25;MQRankSum=-0.793;QD=24.47;ReadPosRankSum=4.196;VQSLOD=1.2780;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:12,0:10:12.04:209,12,0	1/1:6,0:6:18.06:262,18,0	0/0:111,0:21:25.93:0,26,156	0/1:108,0:20:25.06:25,0,142	1/1:9,0:9:3.01:44,3,0	1/1:9,0:9:11.83:206,12,0	1/1:2,1:3:8.98:148,9,0	1/1:14,0:14:31.25:444,31,0	1/1:4,0:4:12.04:286,12,0	1/1:6,0:6:11.41:143,11,0	1/1:12,0:12:25.89:433,26,0	1/1:9,0:8:17.89:353,18,0	1/1:11,0:11:25.98:648,26,0	1/1:7,0:7:9.53:336,10,0	1/1:7,0:7:9.08:253,9,0	1/1:10,0:10:26.92:639,27,0	1/1:11,2:13:20.32:555,20,0	1/1:4,0:4:7.58:106,8,0	1/1:10,0:9:18.06:442,18,0	1/1:12,1:12:8.18:316,8,0	1/1:7,0:7:5.69:81,6,0	1/1:6,0:5:12.04:272,12,0	1/1:2,0:2:6.02:140,6,0	1/1:6,0:6:5.97:89,6,0	0/1:9,0:9:16.27:429,0,16	1/1:14,0:14:29.84:502,30,0	1/1:11,0:11:26.97:383,27,0	1/1:7,0:7:20.99:352,21,0
chr10	6385808	.	G	GGGT	3501.05	PASS	AB=0.983;AC=45;AF=0.804;AN=56;BaseQRankSum=7.144;DP=452;FS=5.067;HRun=0;HaplotypeScore=113.7971;InbreedingCoeff=-0.1708;MQ=46.46;MQ0=27;MQRankSum=-2.444;QD=7.75;ReadPosRankSum=7.907;VQSLOD=1.8044;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:10:9.02:80,9,0	1/1:6,0:6:17.18:125,17,0	0/1:115,0:18:0.75:1,0,245	0/1:112,0:19:7.07:7,0,183	0/1:7,2:9:8.16:8,0,12	0/1:10,0:10:54.39:62,0,54	1/1:3,0:3:7.77:46,8,0	1/1:14,1:15:16.17:431,16,0	1/1:4,0:4:11.76:81,12,0	1/1:4,2:6:11.65:137,12,0	1/1:9,1:10:13.35:232,13,0	0/1:9,0:8:7.03:127,0,7	0/1:11,0:11:5.83:263,0,6	0/1:7,0:7:22.10:114,0,22	0/1:9,0:9:58.42:62,0,58	1/1:10,0:10:3.96:188,4,0	0/1:14,0:14:50.16:108,0,50	1/1:3,0:3:8.99:105,9,0	1/1:11,0:10:17.52:171,18,0	0/1:12,0:11:40.82:88,0,41	1/1:7,0:7:0.25:41,0,0	1/1:7,0:6:3.44:94,3,0	1/1:2,0:2:6.02:71,6,0	1/1:5,0:5:4.56:38,5,0	0/1:10,0:10:40.19:133,0,40	1/1:13,1:14:29.60:255,30,0	1/1:10,1:11:21.83:210,22,0	1/1:7,1:8:20.95:224,21,0
chr10	6385809	.	G	GGT	4167.35	PASS	AB=0.822;AC=43;AF=0.768;AN=56;BaseQRankSum=4.177;DP=457;FS=2.418;HRun=0;HaplotypeScore=107.6772;InbreedingCoeff=-0.1552;MQ=48.06;MQ0=26;MQRankSum=-1.341;QD=9.26;ReadPosRankSum=5.663;VQSLOD=2.9662;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,3:10:12.03:165,12,0	1/1:3,2:6:17.98:199,18,0	0/1:112,0:20:22.66:23,0,184	0/1:106,0:18:15.29:15,0,160	0/1:9,1:10:9.21:55,0,9	0/1:9,0:10:36.27:36,0,48	1/1:3,0:3:8.84:55,9,0	1/1:12,1:17:35.04:364,35,0	1/1:4,0:5:8.96:79,9,0	1/1:5,2:7:11.69:132,12,0	1/1:5,4:10:23.86:263,24,0	0/1:5,1:8:6.97:154,0,7	0/1:8,0:12:3.64:233,0,4	0/1:4,0:8:19.83:136,0,20	0/1:8,0:9:31.21:114,0,31	1/1:7,0:10:7.21:164,7,0	0/1:10,0:14:1.53:174,0,2	1/1:0,3:3:8.90:110,9,0	1/1:8,0:10:17.22:172,17,0	0/1:10,1:12:27.72:87,0,28	0/0:7,0:7:2.98:0,3,22	1/1:4,0:6:15.02:147,15,0	1/1:4,0:4:5.72:29,6,0	1/1:4,0:5:5.93:49,6,0	0/1:5,0:10:25.64:172,0,26	1/1:7,6:15:32.22:398,32,0	1/1:2,7:9:26.85:348,27,0	1/1:4,4:9:23.96:295,24,0
chr10	6385814	.	T	TGGGGG	5273.60	PASS	AB=0.983;AC=40;AF=0.714;AN=56;BaseQRankSum=1.883;DP=447;FS=5.522;HRun=8;HaplotypeScore=126.0963;InbreedingCoeff=-0.1888;MQ=51.64;MQ0=27;MQRankSum=-3.667;QD=15.65;ReadPosRankSum=8.162;VQSLOD=0.3022;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:14,0:13:15.93:115,0,16	1/1:6,0:6:12.93:117,13,0	0/1:101,0:20:34.97:35,0,212	0/0:102,0:16:8.63:0,9,206	1/1:10,0:10:3.89:32,4,0	1/1:9,0:9:5.95:94,6,0	0/1:4,0:4:17.94:64,0,18	0/1:19,0:19:41:190,0,41	0/1:6,0:6:49.86:90,0,50	0/1:7,0:7:15.91:68,0,16	1/1:13,0:13:18.28:235,18,0	1/1:8,0:7:15.05:321,15,0	0/1:12,0:12:3.86:561,0,4	0/1:6,1:7:0.91:290,0,1	1/1:7,0:7:5.12:172,5,0	1/1:9,0:9:12.52:355,13,0	1/1:14,0:14:13.22:468,13,0	1/1:3,0:3:0.98:58,1,0	0/1:10,1:11:28.43:335,0,28	0/1:14,0:13:31.79:213,0,32	0/0:6,0:6:2.22:0,2,7	1/1:6,2:7:11.47:252,11,0	1/1:4,0:4:6.02:105,6,0	1/1:5,0:5:3:54,3,0	0/1:9,0:9:22.48:337,0,22	1/1:15,0:15:4.89:304,5,0	0/1:11,0:11:3.50:233,0,4	1/1:9,0:9:0.15:174,0,0
chr10	6385828	.	GT	G	3768.11	PASS	AB=0.683;AC=50;AF=0.893;AN=56;BaseQRankSum=-0.109;DP=431;FS=1.909;HRun=10;HaplotypeScore=108.6148;InbreedingCoeff=0.1817;MQ=53.28;MQ0=24;MQRankSum=-3.444;QD=10.67;ReadPosRankSum=3.475;VQSLOD=2.9642;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,13:18:35.90:310,36,0	1/1:1,4:5:11.99:104,12,0	0/0:78,0:18:20.07:0,20,173	0/1:82,0:13:8.50:8,0,104	0/1:3,6:9:24.49:127,0,24	1/1:8,4:12:21:181,21,0	1/1:2,9:11:2.05:113,2,0	1/1:9,7:14:13.66:128,14,0	1/1:2,8:10:20.76:172,21,0	1/1:1,6:7:18:156,18,0	1/1:0,13:13:35.98:312,36,0	1/1:3,0:5:5.53:17,6,0	1/1:4,0:14:11.74:42,12,0	1/1:0,0:6:11.78:34,12,0	1/1:0,7:7:18:156,18,0	0/1:4,10:14:27.43:179,0,27	1/1:4,11:15:26.97:233,27,0	1/1:2,3:5:3:26,3,0	1/1:6,10:14:29.97:260,30,0	1/1:3,11:13:26.91:234,27,0	1/1:1,3:4:2.36:25,2,0	1/1:4,7:10:14.99:130,15,0	1/1:0,0:5:9.97:29,10,0	1/1:2,0:6:5.89:17,6,0	1/1:2,10:12:17.99:156,18,0	1/1:2,10:12:29.99:259,30,0	0/1:2,9:11:3.20:204,0,3	1/1:2,6:8:17.99:156,18,0
chr10	6385859	.	T	TTTTG	10742.03	PASS	AB=1.000;AC=33;AF=0.589;AN=56;BaseQRankSum=-1.037;DP=442;FS=0.918;HRun=0;HaplotypeScore=103.8045;InbreedingCoeff=0.9148;MQ=59.73;MQ0=7;MQRankSum=-7.781;QD=44.57;ReadPosRankSum=2.192;VQSLOD=5.0667;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,16:25:23.77:1251,24,0	1/1:1,2:3:9.03:190,9,0	0/0:28,0:17:39.97:0,40,723	0/0:32,0:20:40.81:0,41,742	1/1:1,17:19:42.14:1019,42,0	0/0:11,0:11:33.10:0,33,573	0/1:15,0:15:4.94:5,0,384	1/1:6,9:14:36.10:613,36,0	0/0:19,0:19:44.87:0,45,813	1/1:1,9:11:30.05:601,30,0	1/1:2,20:22:57.19:1332,57,0	1/1:2,10:14:21.46:484,21,0	1/1:1,20:22:51.17:1274,51,0	1/1:1,6:8:12.04:310,12,0	0/0:19,0:19:54.19:0,54,980	0/0:21,0:21:54.04:0,54,996	0/0:19,0:19:48.06:0,48,779	1/1:0,8:9:12.04:272,12,0	0/0:12,0:12:30.04:0,30,480	0/0:18,0:17:48.10:0,48,803	1/1:0,9:9:9.03:194,9,0	0/0:8,0:8:24.06:0,24,382	1/1:0,14:14:28:703,28,0	1/1:1,10:13:15.05:387,15,0	0/0:14,0:14:30:0,30,430	1/1:2,14:17:44.98:1021,45,0	1/1:3,10:14:21.07:544,21,0	1/1:1,7:9:21.07:544,21,0
chr10	6388853	.	CA	C	6087.31	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-0.640;DP=751;FS=4.367;HRun=9;HaplotypeScore=93.6229;InbreedingCoeff=0.9811;MQ=79.05;MQ0=1;MQRankSum=-0.213;QD=22.63;ReadPosRankSum=1.186;VQSLOD=5.3963;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,102,1150	0/0:13,0:13:33.09:0,33,373	0/0:18,1:19:5.70:0,6,276	0/0:18,0:18:20.83:0,21,343	0/0:26,0:26:75.22:0,75,866	1/1:3,29:32:87.04:796,87,0	1/1:6,17:23:16.41:405,16,0	0/0:33,0:33:84.25:0,84,969	1/1:2,19:21:57.02:522,57,0	0/0:41,1:42:89.88:0,90,1283	0/0:34,1:34:71.83:0,72,1080	0/0:29,0:29:69.19:0,69,783	0/0:30,1:31:59.72:0,60,925	0/0:25,1:26:44.74:0,45,761	1/1:4,17:21:51.02:467,51,0	1/1:4,30:34:83.94:769,84,0	1/1:1,14:15:36.02:329,36,0	0/0:17,0:17:41.61:0,42,459	1/1:2,14:16:42.02:384,42,0	1/1:5,33:38:90.02:823,90,0	0/0:23,0:22:60.17:0,60,683	1/1:2,29:31:84.04:769,84,0	0/0:24,0:25:69.04:0,69,776	0/0:27,0:27:81.24:0,81,934	1/1:7,31:38:90.04:824,90,0	0/0:38,0:39:99:0,99,1122	0/0:20,0:21:57:0,57,637	0/0:22,0:22:51.15:0,51,589
chr10	6391278	.	C	CA	33329.29	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-8.880;DP=800;FS=2.799;HRun=1;HaplotypeScore=73.6892;InbreedingCoeff=0.9994;MQ=76.46;MQ0=0;MQRankSum=-10.381;QD=44.14;ReadPosRankSum=6.775;VQSLOD=4.0032;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,49:51:99:2013,126,0	1/1:0,10:10:26.96:431,27,0	0/0:25,0:25:70.47:0,70,927	0/0:20,0:20:53.19:0,53,686	1/1:0,24:24:69.24:1103,69,0	1/1:0,22:22:66.23:1054,66,0	1/1:0,28:28:78.27:1247,78,0	1/1:2,32:34:96.31:1494,96,0	1/1:0,36:36:99:1726,108,0	1/1:0,40:40:99:1861,120,0	1/1:0,21:21:51.11:785,51,0	1/1:0,21:21:57.19:911,57,0	1/1:1,42:43:99:1965,123,0	1/1:1,23:24:66.22:1034,66,0	1/1:0,31:31:87.30:1391,87,0	1/1:0,37:37:99:1582,99,0	1/1:1,22:23:63.21:1007,63,0	1/1:0,15:15:42.14:671,42,0	1/1:1,29:30:90.24:1369,90,0	1/1:0,27:27:75.26:1199,75,0	1/1:1,44:45:99:1966,123,0	1/1:0,25:25:75.26:1199,75,0	1/1:0,32:32:81.28:1295,81,0	1/1:3,34:37:99:1630,102,0	1/1:0,19:19:54.18:863,54,0	1/1:0,31:31:93.32:1472,93,0	1/1:0,30:30:87.30:1390,87,0	1/1:0,19:19:42.14:671,42,0
chr10	6394278	.	TA	T	7745.60	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=15.665;DP=731;FS=7.478;HRun=3;HaplotypeScore=144.5987;InbreedingCoeff=0.9702;MQ=88.68;MQ0=0;MQRankSum=-6.150;QD=30.62;ReadPosRankSum=2.188;VQSLOD=3.4489;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:60,0:60:99:0,166,2358	1/1:0,9:9:21.07:260,21,0	0/0:27,0:27:72.04:0,72,1015	0/0:34,0:34:84.26:0,84,1182	1/1:3,23:26:69.20:840,69,0	0/0:28,0:26:75.25:0,75,1079	0/0:22,0:22:66.22:0,66,950	0/0:33,0:33:99:0,99,1394	0/0:34,0:34:90.27:0,90,1272	1/1:0,31:31:93.29:1153,93,0	1/1:0,20:20:45.14:557,45,0	1/1:0,21:21:54.17:669,54,0	1/1:0,32:32:75.23:929,75,0	1/1:2,22:24:63.20:780,63,0	0/0:38,0:38:99:0,108,1532	0/0:21,0:19:51.17:0,51,734	0/0:41,0:40:99:0,114,1605	1/1:1,14:15:2.03:477,2,0	0/0:25,0:25:69.21:0,69,973	0/0:18,0:18:51.17:0,51,735	1/1:2,19:21:48.15:595,48,0	0/0:28,0:28:78.26:0,78,1118	1/1:1,22:23:54.17:669,54,0	1/1:0,31:31:65.42:817,65,0	0/0:13,0:13:36.12:0,36,518	0/0:23,1:24:29.02:0,29,870	0/0:19,0:19:57.19:0,57,819	0/0:13,0:13:39.13:0,39,559
chr10	6394327	.	TAC	T	1360.50	PASS	AB=0.957;AC=27;AF=0.482;AN=56;BaseQRankSum=6.663;DP=758;FS=12.365;HRun=0;HaplotypeScore=244.9496;InbreedingCoeff=0.3366;MQ=51.19;MQ0=18;MQRankSum=1.116;QD=2.94;ReadPosRankSum=0.133;VQSLOD=1.2417;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:42,1:41:26.28:0,26,818	0/0:14,0:14:8.54:0,9,58	0/0:52,0:28:6.02:0,6,86	0/0:46,0:22:9.03:0,9,120	0/0:20,0:20:4.14:0,4,20	1/1:29,0:27:49.46:331,49,0	1/1:28,0:27:26.59:183,27,0	0/1:34,2:35:20.64:21,0,433	0/1:35,0:35:5.30:88,0,5	0/0:35,0:35:49.66:0,50,363	0/0:24,0:24:2.86:0,3,21	1/1:24,0:24:6.45:71,6,0	1/1:29,0:29:16.27:54,16,0	1/1:24,0:23:12.94:42,13,0	1/1:38,0:38:29.82:128,30,0	0/1:22,0:19:15.70:69,0,16	0/1:31,0:30:24.68:53,0,25	0/0:9,0:9:11.90:0,12,85	0/1:13,0:13:7.16:7,0,10	1/1:22,0:22:0.87:75,1,0	0/0:22,0:20:0:0,0,0	1/1:28,0:28:30.62:129,31,0	1/1:29,0:29:13.55:45,14,0	0/0:23,0:23:0:0,0,0	1/1:19,0:19:23.98:98,24,0	0/1:24,1:25:36.11:36,0,442	0/1:22,7:28:99:109,0,400	0/0:5,0:5:6.02:0,6,92
chr10	6394344	.	A	AG	1391.82	PASS	AB=0.811;AC=11;AF=0.196;AN=56;BaseQRankSum=8.693;DP=835;FS=2.721;HRun=0;HaplotypeScore=232.4352;InbreedingCoeff=0.4967;MQ=41.19;MQ0=41;MQRankSum=-6.986;QD=8.64;ReadPosRankSum=4.016;VQSLOD=3.5527;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:47:99:0,120,1604	0/1:14,0:14:13.82:14,0,33	0/0:82,0:18:54.18:0,54,738	0/0:91,0:18:54.13:0,54,725	0/1:18,0:18:9.97:10,0,19	0/0:37,0:35:81.13:0,81,888	0/0:32,0:31:54.13:0,54,636	0/0:35,0:33:90.13:0,90,1202	0/0:34,0:34:54.31:0,54,574	0/1:26,0:27:80.77:81,0,84	0/0:19,2:21:1.24:0,1,4	0/1:2,17:20:8.73:396,0,9	1/1:1,17:21:30.22:450,30,0	1/1:4,16:19:20.52:320,21,0	0/0:38,0:38:51.57:0,52,563	0/0:23,0:20:38.98:0,39,417	0/0:31,0:30:66.15:0,66,802	0/0:9,0:8:16.37:0,16,107	0/0:18,0:17:28.83:0,29,541	0/0:24,0:23:57.13:0,57,685	0/0:18,0:16:4.56:0,5,46	0/0:32,0:32:68.85:0,69,808	1/1:3,20:24:20.72:279,21,0	0/1:3,13:16:0.01:0,0,0	0/0:27,0:26:42.17:0,42,635	0/0:30,0:30:90.07:0,90,1177	0/0:33,0:31:71.80:0,72,859	0/0:9,0:9:20.96:0,21,256
chr10	6394346	.	A	AG	2392.85	PASS	AB=0.811;AC=17;AF=0.304;AN=56;BaseQRankSum=8.676;DP=828;FS=1.477;HRun=0;HaplotypeScore=226.1480;InbreedingCoeff=0.7130;MQ=40.88;MQ0=42;MQRankSum=-9.151;QD=12.93;ReadPosRankSum=3.835;VQSLOD=4.3836;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:47:99:0,120,1641	1/1:0,14:14:20.98:270,21,0	0/0:81,0:16:48.13:0,48,640	0/0:95,0:18:50.53:0,51,668	1/1:2,14:17:11.48:182,11,0	0/0:37,0:35:81.14:0,81,903	0/0:32,0:31:66.06:0,66,763	0/0:35,0:33:99:0,99,1290	0/0:33,0:33:50.85:0,51,551	1/1:2,23:27:78.26:1212,78,0	1/1:2,19:21:2.58:47,3,0	0/1:19,1:20:9.37:153,0,9	1/1:20,1:21:28.47:199,28,0	1/1:20,0:18:17.18:179,17,0	0/0:37,0:37:54.58:0,55,603	0/0:23,0:20:41.99:0,42,457	0/0:30,0:29:66.17:0,66,819	0/1:3,5:7:23.33:221,0,23	0/0:17,0:16:13.19:0,13,524	0/0:24,0:23:57.13:0,57,683	0/0:7,11:16:1.47:0,1,39	0/0:31,0:32:71.85:0,72,833	1/1:24,0:24:20.03:118,20,0	0/1:11,2:13:0.01:0,0,0	0/0:27,0:26:27.17:0,27,628	0/0:31,0:31:93.07:0,93,1201	0/0:33,0:31:68.75:0,69,793	0/0:9,0:9:4.08:0,4,271
chr10	6394355	.	CACACAG	C	2850.19	PASS	AB=1.000;AC=20;AF=0.357;AN=56;BaseQRankSum=0.773;DP=843;FS=5.524;HRun=0;HaplotypeScore=256.3165;InbreedingCoeff=0.6735;MQ=42.17;MQ0=45;MQRankSum=4.935;QD=8.56;ReadPosRankSum=-1.835;VQSLOD=1.7262;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:53:99:0,135,2678	0/0:13,0:13:11.12:0,11,152	0/0:90,0:19:11.51:0,12,417	0/0:106,0:16:28.89:0,29,385	0/1:14,0:14:0.11:0,0,0	0/1:40,0:38:99:260,0,280	0/1:32,0:31:99:162,0,155	0/0:39,0:37:91:0,91,1401	1/1:34,0:34:37.48:363,37,0	0/0:25,0:25:16.40:0,16,807	0/0:16,0:16:2.90:0,3,65	0/0:20,0:20:32.77:0,33,398	0/0:18,0:18:14.20:0,14,292	0/0:17,0:15:8.61:0,9,203	1/1:34,2:36:36:336,36,0	1/1:26,0:23:48.51:374,49,0	1/1:29,0:27:56.70:380,57,0	0/0:6,0:5:14.80:0,15,229	1/1:17,0:16:34.47:238,34,0	1/1:24,1:24:19.96:249,20,0	0/1:17,0:15:0.20:0,0,41	1/1:32,0:32:40.35:346,40,0	0/0:21,0:21:17.27:0,17,189	0/0:10,0:10:0:0,0,0	1/1:29,2:30:54.99:334,55,0	0/0:31,1:32:14.68:0,15,1468	0/0:33,0:32:1.98:0,2,1350	0/0:9,0:9:23.96:0,24,369
chr10	6394357	.	CACAG	C	6739.50	PASS	AB=1.000;AC=26;AF=0.464;AN=56;BaseQRankSum=-0.725;DP=847;FS=3.572;HRun=0;HaplotypeScore=225.4401;InbreedingCoeff=0.6869;MQ=43.10;MQ0=45;MQRankSum=7.381;QD=14.52;ReadPosRankSum=-0.481;VQSLOD=4.3446;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:54:99:0,141,2226	0/0:12,0:12:2.45:0,2,94	0/1:91,0:22:39.33:39,0,318	0/0:108,0:17:25.06:0,25,381	1/1:14,0:14:0.85:2,1,0	1/1:35,5:38:44:623,44,0	1/1:31,2:32:23.64:291,24,0	0/0:42,0:40:79.89:0,80,1194	1/1:24,10:34:56.12:788,56,0	0/0:24,0:24:28.85:0,29,591	0/0:16,0:16:2.90:0,3,44	0/0:20,0:20:32.10:0,32,224	0/0:18,0:18:14.32:0,14,164	0/0:17,0:15:9.94:0,10,117	1/1:20,15:35:62.94:864,63,0	1/1:16,10:23:50.85:709,51,0	1/1:21,7:26:50.51:671,51,0	0/0:6,0:5:14.68:0,15,163	1/1:3,13:15:36.41:354,36,0	1/1:18,7:24:48.50:619,48,0	0/1:15,0:14:5.48:5,0,17	1/1:22,11:33:69.07:972,69,0	0/0:20,0:20:14.13:0,14,93	0/1:10,0:10:0:0,0,0	1/1:20,10:29:61.54:772,62,0	0/0:34,0:34:30.50:0,31,1137	0/1:33,0:32:28.49:28,0,971	0/0:10,0:10:26.93:0,27,324
chr10	6394359	.	CAG	C	5330.67	PASS	AB=0.994;AC=27;AF=0.482;AN=56;BaseQRankSum=1.937;DP=842;FS=1.494;HRun=0;HaplotypeScore=208.2800;InbreedingCoeff=0.6407;MQ=43.12;MQ0=45;MQRankSum=4.383;QD=10.83;ReadPosRankSum=1.542;VQSLOD=4.3009;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:54,1:53:99:0,134,1720	0/0:11,0:11:9.35:0,9,68	0/1:92,0:21:22.01:22,0,272	0/0:113,0:18:30.43:0,30,350	1/1:13,0:13:1.16:3,1,0	1/1:26,14:38:96.02:1036,96,0	1/1:25,9:33:51.48:648,51,0	0/0:44,0:42:40.47:0,40,1026	1/1:32,1:34:46.52:489,47,0	0/0:22,0:22:40.64:0,41,420	0/0:15,0:15:2.88:0,3,26	0/0:20,0:20:25.66:0,26,107	0/0:17,0:17:16.55:0,17,94	0/0:17,0:15:14.89:0,15,76	1/1:32,1:34:62.80:498,63,0	1/1:25,1:24:53.59:425,54,0	1/1:27,0:25:38.17:399,38,0	0/0:6,0:5:11.80:0,12,97	1/1:16,0:15:36.72:280,37,0	1/1:21,3:23:53.89:455,54,0	0/1:13,0:13:8.10:8,0,9	1/1:32,0:32:68.63:539,69,0	0/0:20,0:20:15.13:0,15,60	0/1:10,0:10:0:0,0,0	1/1:30,0:29:59.16:485,59,0	0/1:32,1:33:18.99:19,0,834	0/1:34,0:33:25.55:26,0,639	0/0:10,0:10:26.93:0,27,278
chr10	6394362	.	A	AG	2184.99	PASS	AB=0.775;AC=19;AF=0.339;AN=56;BaseQRankSum=10.167;DP=819;FS=9.777;HRun=1;HaplotypeScore=200.8384;InbreedingCoeff=0.5965;MQ=44.29;MQ0=43;MQRankSum=-8.250;QD=12.78;ReadPosRankSum=2.050;VQSLOD=2.0360;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:55:99:0,150,2074	1/1:0,10:10:12.04:190,12,0	0/0:95,0:24:29.68:0,30,724	0/0:113,0:18:25.82:0,26,594	0/1:0,8:9:0.47:0,0,1	0/0:37,1:37:42.87:0,43,532	0/0:34,1:35:17.42:0,17,472	0/0:43,0:41:99:0,117,1597	0/0:34,1:35:2.88:0,3,346	1/1:3,11:15:3.18:632,3,0	1/1:2,12:14:2.58:47,3,0	0/1:18,1:19:5.21:425,0,5	1/1:14,1:15:21.20:366,21,0	1/1:15,1:14:14.50:272,15,0	0/0:32,1:33:14.54:0,15,329	0/0:25,0:23:42.68:0,43,324	0/0:25,0:24:56.90:0,57,457	0/1:2,3:4:22.43:132,0,22	0/0:16,0:15:35.49:0,35,327	0/0:24,0:23:52.19:0,52,382	1/1:5,3:8:2.50:9,2,0	0/1:29,1:31:12.17:12,0,284	1/1:17,2:19:17.78:274,18,0	0/1:8,2:10:0:0,0,0	0/0:28,1:29:14.48:0,14,395	0/0:32,0:32:83.65:0,84,1075	0/0:34,0:33:72.49:0,72,939	0/0:10,0:10:30.06:0,30,397
chr10	6394392	.	A	AG	534.49	PASS	AB=0.523;AC=10;AF=0.179;AN=56;BaseQRankSum=7.052;DP=712;FS=0.000;HRun=0;HaplotypeScore=159.0560;InbreedingCoeff=0.4849;MQ=56.78;MQ0=23;MQRankSum=-5.808;QD=10.48;ReadPosRankSum=-1.974;VQSLOD=2.9465;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:56:99:0,150,2075	1/1:0,3:3:2.98:21,3,0	0/0:82,1:34:87.22:0,87,1153	0/0:99,0:34:76.67:0,77,937	0/0:0,5:5:0:0,0,0	0/0:31,0:31:75.23:0,75,1027	0/0:34,0:34:50.28:0,50,1193	0/0:43,0:43:99:0,126,1746	0/0:34,0:34:66.08:0,66,922	0/1:2,6:8:17.91:244,0,18	0/1:0,5:5:0:0,0,0	0/1:1,11:12:18.08:189,0,18	1/1:1,5:8:3.13:72,3,0	1/1:0,7:7:5.47:131,5,0	0/0:34,0:34:63.16:0,63,873	0/0:24,0:23:45.14:0,45,629	0/0:26,0:26:57.19:0,57,796	0/0:1,1:2:3:0,3,26	0/0:25,0:25:69.19:0,69,925	0/0:25,0:25:60.20:0,60,835	0/0:3,0:3:0:0,0,0	0/0:28,0:28:60.20:0,60,839	0/1:0,8:8:0:0,0,0	0/0:1,4:5:1.81:0,2,5	0/0:29,1:29:63.21:0,63,878	0/0:33,0:33:93.31:0,93,1296	0/0:26,0:26:72.06:0,72,960	0/0:13,0:13:39.13:0,39,545
chr10	6394398	.	AG	A	507.49	PASS	AB=0.580;AC=13;AF=0.250;AN=52;BaseQRankSum=7.988;DP=679;FS=0.000;HRun=1;HaplotypeScore=140.7528;InbreedingCoeff=0.6153;MQ=58.36;MQ0=17;MQRankSum=-5.830;QD=8.32;ReadPosRankSum=-4.429;VQSLOD=-0.7408;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:54:99:0,141,2249	./.	0/0:77,3:28:81.16:0,81,1191	0/0:81,6:41:90.19:0,90,1278	0/1:0,3:3:0:0,0,0	0/0:30,0:30:69.23:0,69,1094	0/0:33,0:33:69.63:0,70,1321	0/0:45,0:45:99:0,135,2151	0/0:32,0:32:60.05:0,60,944	0/1:1,7:8:23.99:222,0,24	0/1:0,4:4:0:0,0,0	1/1:0,9:9:14.99:166,15,0	1/1:2,7:9:8.06:89,8,0	1/1:0,7:7:9.03:119,9,0	0/0:30,0:30:57.08:0,57,884	0/0:21,0:20:39.05:0,39,620	0/0:26,0:26:60.20:0,60,941	0/1:1,2:3:14.81:15,0,25	0/0:26,0:26:72.25:0,72,1149	0/0:22,0:22:48.16:0,48,767	1/1:3,2:5:2.48:40,2,0	0/0:27,0:27:54.08:0,54,860	./.	0/1:9,4:13:0.10:0,0,0	0/0:24,2:25:57.19:0,57,907	0/0:28,0:28:84.28:0,84,1311	0/0:26,0:26:45.22:0,45,973	0/0:15,0:15:45.12:0,45,659
chr10	6394407	.	G	GTA	32.57	PASS	AB=0.800;AC=10;AF=0.200;AN=50;BaseQRankSum=4.495;DP=664;FS=0.000;HRun=0;HaplotypeScore=131.5082;InbreedingCoeff=0.6447;MQ=61.84;MQ0=16;MQRankSum=-2.281;QD=0.99;ReadPosRankSum=-1.545;VQSLOD=2.1945;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:57:99:0,150,2418	./.	0/0:76,0:26:59.55:0,60,869	0/0:87,0:46:99:0,99,1462	./.	0/0:31,0:31:66.21:0,66,1029	0/0:35,0:35:90.14:0,90,1279	0/0:59,0:59:99:0,171,2519	0/0:36,0:36:57.19:0,57,894	0/0:2,0:2:5.98:0,6,69	./.	1/1:3,0:3:1.24:3,1,0	1/1:2,2:4:3.27:79,3,0	0/0:2,0:2:5.17:0,5,20	0/0:32,0:32:48.06:0,48,740	0/0:21,0:21:39.12:0,39,599	0/0:26,0:26:34.70:0,35,734	1/1:1,1:2:3.01:46,3,0	0/0:29,0:29:78.24:0,78,1203	0/0:21,0:21:45.15:0,45,715	1/1:5,2:7:0.89:3,1,0	0/0:26,0:26:54.16:0,54,829	0/1:5,0:5:0.01:0,0,0	0/1:4,8:12:0.01:0,0,0	0/0:24,0:23:48.09:0,48,728	0/0:27,0:27:78.27:0,78,1272	0/0:20,0:20:54.17:0,54,839	0/0:14,0:14:42.14:0,42,681
chr10	6394423	.	G	GCA	288.71	PASS	AB=0.861;AC=5;AF=0.096;AN=52;BaseQRankSum=7.899;DP=671;FS=7.971;HRun=0;HaplotypeScore=151.8867;InbreedingCoeff=0.1586;MQ=65.49;MQ0=15;MQRankSum=-6.382;QD=7.40;ReadPosRankSum=-5.815;VQSLOD=1.0316;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:53:99:0,156,2464	0/0:0,1:1:2.90:0,3,16	0/0:81,0:30:76.97:0,77,993	0/0:89,0:53:98.63:0,99,1433	0/0:1,2:3:0:0,0,0	0/0:26,0:25:46.56:0,47,800	0/0:31,0:31:65.92:0,66,995	0/0:53,0:53:99:0,154,2452	0/0:39,0:39:43.25:0,43,843	0/1:3,4:7:48.28:183,0,48	./.	0/1:5,0:5:0.69:1,0,11	0/1:8,0:8:6.42:157,0,6	./.	0/0:32,0:32:12.33:0,12,437	0/0:21,0:21:37.55:0,38,544	0/0:26,0:26:20.88:0,21,586	0/1:2,2:4:42:45,0,42	0/0:26,0:26:66.18:0,66,992	0/0:20,0:20:10.97:0,11,419	0/0:4,5:8:1.31:0,1,8	0/0:23,0:23:39.13:0,39,608	0/0:4,0:4:2.77:0,3,15	0/1:15,0:15:0:0,0,0	0/0:23,0:23:12.76:0,13,500	0/0:33,0:33:99:0,99,1557	0/0:21,0:21:51.16:0,51,801	0/0:14,0:14:41.50:0,42,644
chr10	6394433	.	A	ACT	332.89	PASS	AB=0.871;AC=7;AF=0.130;AN=54;BaseQRankSum=8.769;DP=705;FS=22.741;HRun=0;HaplotypeScore=204.2886;InbreedingCoeff=0.0007;MQ=63.80;MQ0=12;MQRankSum=-7.598;QD=2.97;ReadPosRankSum=-5.203;VQSLOD=-0.2147;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:54:99:0,153,2199	0/0:3,0:3:7.91:0,8,42	0/0:65,0:28:57.48:0,57,764	0/0:80,0:51:99:0,118,1383	0/0:10,0:10:6.84:0,7,44	0/0:27,0:26:46.45:0,46,701	0/0:33,0:33:59.42:0,59,846	0/0:59,0:59:99:0,171,2368	0/0:39,0:39:33.04:0,33,731	0/1:17,0:17:71.31:71,0,189	./.	0/1:7,4:11:1.67:2,0,35	0/1:9,7:16:1.82:335,0,2	0/0:5,0:5:7.34:0,7,27	0/1:33,0:33:1.03:1,0,336	0/0:22,0:22:36.76:0,37,480	0/0:25,0:25:6:0,6,388	0/1:4,0:4:21.76:22,0,40	0/0:24,0:24:63.05:0,63,828	0/0:22,0:22:6.39:0,6,373	0/0:9,0:7:6.08:0,6,32	0/0:20,0:20:9.72:0,10,346	0/1:4,4:8:4.41:4,0,10	0/0:4,11:15:4.07:0,4,12	0/1:23,0:23:0.83:1,0,337	0/0:32,0:32:93.31:0,93,1402	0/0:19,0:19:51.14:0,51,727	0/0:23,0:23:66.05:0,66,807
chr10	6394451	.	ATAC	A	1075.43	PASS	AB=0.973;AC=24;AF=0.429;AN=56;BaseQRankSum=12.533;DP=659;FS=3.222;HRun=0;HaplotypeScore=227.8120;InbreedingCoeff=-0.1012;MQ=59.26;MQ0=3;MQRankSum=-11.831;QD=3.07;ReadPosRankSum=-8.199;VQSLOD=0.4300;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:50:99:0,138,3318	0/1:4,1:5:45.71:48,0,46	0/0:43,0:32:80.47:0,80,1778	0/0:68,0:55:99:0,115,2944	1/1:12,0:12:8.74:47,9,0	0/1:23,0:22:87.77:88,0,530	0/1:24,1:25:44.10:44,0,803	0/0:57,0:57:99:0,172,3982	0/1:34,0:34:63.04:63,0,740	0/1:24,1:25:99:137,0,614	1/1:7,1:8:2.78:13,3,0	1/1:15,0:15:9.18:76,9,0	0/1:24,1:26:99:104,0,525	0/1:9,1:10:49.17:111,0,49	0/1:32,0:32:99:108,0,303	0/1:21,0:21:73.32:73,0,351	0/0:15,0:15:14.98:0,15,296	0/0:3,0:3:9.03:0,9,184	0/1:15,0:14:14.79:15,0,837	0/1:24,0:24:43.70:44,0,492	1/1:7,1:6:2.51:11,3,0	0/1:18,0:18:59.76:60,0,254	1/1:11,1:12:10.30:61,10,0	0/1:16,0:16:7.01:7,0,13	0/1:21,0:21:99:139,0,113	0/0:33,0:33:99:0,99,2393	0/0:18,0:18:54.19:0,54,1285	0/0:18,0:18:54.19:0,54,1330
chr10	6394457	.	A	AACACACACACAGCAC	19226.54	PASS	AB=0.511;AC=41;AF=0.732;AN=56;BaseQRankSum=12.163;DP=715;FS=9.333;HRun=0;HaplotypeScore=287.8507;InbreedingCoeff=0.8214;MQ=55.38;MQ0=2;MQRankSum=-14.112;QD=44.10;ReadPosRankSum=-5.895;VQSLOD=1.8293;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:49:99:0,123,4480	1/1:3,1:6:12.04:507,12,0	0/0:46,0:31:50.93:0,51,1852	0/0:65,0:54:99:0,109,3271	1/1:9,0:16:18.02:441,18,0	1/1:9,14:27:21.54:960,22,0	1/1:19,0:29:51.17:1453,51,0	0/0:47,0:47:99:0,117,4308	1/1:9,19:40:27.09:1385,27,0	1/1:16,3:28:69.67:3563,70,0	1/1:6,0:10:17.98:321,18,0	1/1:9,1:18:39.13:1456,39,0	1/1:15,0:28:75.26:3303,75,0	1/1:4,2:13:24.08:850,24,0	1/1:6,26:43:18.06:605,18,0	1/1:4,16:28:18.06:864,18,0	1/1:5,13:21:8.70:185,9,0	1/1:1,1:2:6.02:373,6,0	1/1:13,0:16:27.09:922,27,0	1/1:3,18:24:9.03:319,9,0	1/1:7,0:7:2.99:24,3,0	1/1:4,17:22:12.04:443,12,0	1/1:7,0:14:15.05:468,15,0	1/1:12,0:16:11.89:265,12,0	0/1:1,16:23:24.49:519,0,24	0/0:35,0:35:81.25:0,81,2694	0/0:18,0:18:45.14:0,45,1650	0/0:18,0:18:51.17:0,51,2174
chr10	6394468	.	AT	A	583.41	PASS	AB=0.828;AC=9;AF=0.161;AN=56;BaseQRankSum=6.049;DP=688;FS=4.098;HRun=1;HaplotypeScore=227.5347;InbreedingCoeff=0.0228;MQ=50.96;MQ0=0;MQRankSum=-6.094;QD=4.11;ReadPosRankSum=2.340;VQSLOD=0.4105;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,138,2148	0/1:6,2:8:19.81:20,0,135	0/0:51,0:37:93.76:0,94,1385	0/0:60,0:47:99:0,127,1939	0/0:15,5:20:27.22:0,27,156	0/1:22,1:22:14.14:14,0,249	0/1:17,11:28:96.22:96,0,441	0/0:50,0:50:99:0,150,2343	0/0:31,0:31:25.05:0,25,482	0/1:17,9:26:99:218,0,605	0/0:7,4:11:14.59:0,15,145	0/0:12,6:18:41.91:0,42,315	0/1:17,11:28:99:242,0,561	0/1:12,1:13:9.75:10,0,233	0/0:42,0:41:38.88:0,39,472	0/0:26,0:26:27.01:0,27,348	0/0:20,0:20:12.43:0,12,188	1/1:1,1:2:6.02:82,6,0	0/1:13,1:13:40.14:40,0,391	0/0:22,0:22:30.12:0,30,359	0/0:5,3:7:8.80:0,9,53	0/0:17,0:17:14.97:0,15,206	0/0:9,5:14:32.29:0,32,320	0/0:9,8:17:13.82:0,14,124	0/0:26,0:26:23.74:0,24,370	0/0:30,0:30:90.28:0,90,1386	0/0:16,0:16:48.16:0,48,767	0/0:19,0:19:54.14:0,54,834
chr10	6394472	.	ATAC	A	924.04	PASS	AB=0.823;AC=8;AF=0.143;AN=56;BaseQRankSum=6.440;DP=685;FS=11.773;HRun=0;HaplotypeScore=245.3175;InbreedingCoeff=-0.1466;MQ=52.01;MQ0=0;MQRankSum=-6.483;QD=6.42;ReadPosRankSum=2.411;VQSLOD=1.5336;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,138,3240	0/1:6,2:8:35.69:36,0,163	0/0:53,0:38:99:0,105,2230	0/0:61,0:45:99:0,126,2688	0/0:15,5:20:22.81:0,23,209	0/1:20,1:20:36.31:36,0,470	0/1:19,10:30:99:144,0,893	0/0:52,0:52:99:0,157,3524	0/0:33,0:33:19.37:0,19,1174	0/1:17,9:26:99:302,0,565	0/0:7,4:11:14.07:0,14,167	0/0:12,6:18:22.35:0,22,343	0/1:17,11:28:99:380,0,572	0/1:12,1:13:51.64:52,0,298	0/0:39,0:38:44.88:0,45,1007	0/0:24,0:24:32.14:0,32,721	0/0:17,1:18:23.04:0,23,467	0/1:2,1:3:8.68:101,0,9	0/1:14,1:14:7.15:7,0,824	0/0:22,0:22:39:0,39,828	0/0:5,3:7:0.66:0,1,110	0/0:15,0:15:21.07:0,21,448	0/0:9,5:14:23.68:0,24,362	0/0:9,8:17:14.98:0,15,205	0/0:24,0:24:29.72:0,30,604	0/0:28,0:28:84.29:0,84,2008	0/0:16,0:16:48.16:0,48,1155	0/0:21,0:21:63.20:0,63,1489
chr10	6394475	.	C	CCACA	7384.08	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=10.045;DP=712;FS=8.155;HRun=0;HaplotypeScore=244.4612;InbreedingCoeff=0.9021;MQ=51.41;MQ0=3;MQRankSum=-12.758;QD=42.68;ReadPosRankSum=2.689;VQSLOD=3.8614;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,114,1938	1/1:7,2:9:8.50:350,8,0	0/0:57,0:38:78.04:0,78,1222	0/0:60,0:45:87.23:0,87,1360	1/1:12,7:20:30.10:705,30,0	0/0:21,0:21:22.03:0,22,421	0/0:31,0:31:22.74:0,23,674	0/0:54,0:54:99:0,108,1818	0/0:36,0:36:69.18:0,69,1081	1/1:14,12:27:38.84:1366,39,0	1/1:10,2:12:12.04:301,12,0	1/1:12,7:19:45.15:1058,45,0	1/1:22,6:28:52.24:1477,52,0	1/1:8,5:13:13.76:712,14,0	0/0:40,0:39:44.73:0,45,740	0/0:24,0:24:33.11:0,33,566	0/0:20,0:20:29.18:0,29,374	0/1:3,0:3:7.22:67,0,7	0/0:16,0:15:33:0,33,569	0/0:22,0:22:39.13:0,39,663	1/1:6,3:9:7.25:224,7,0	0/0:15,0:15:20.90:0,21,323	1/1:12,3:15:33.11:805,33,0	1/1:15,2:17:14.97:319,15,0	0/0:24,0:24:26.50:0,27,426	0/0:28,0:28:69.24:0,69,1192	0/0:18,0:18:45.14:0,45,749	0/0:20,0:20:51.17:0,51,881
chr10	6394487	.	ATG	A	555.07	PASS	AB=0.736;AC=12;AF=0.214;AN=56;BaseQRankSum=7.865;DP=715;FS=0.564;HRun=0;HaplotypeScore=244.2227;InbreedingCoeff=-0.1565;MQ=49.01;MQ0=8;MQRankSum=-8.854;QD=3.28;ReadPosRankSum=2.120;VQSLOD=2.3035;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,120,2420	0/1:5,4:9:23.79:94,0,24	0/0:70,0:37:99:0,108,1877	0/0:65,0:37:77.81:0,78,1635	0/1:14,5:19:39.26:39,0,77	0/0:26,0:25:40.24:0,40,824	0/0:32,0:34:43.44:0,43,1081	0/0:51,0:51:99:0,154,2953	0/0:34,0:34:78.21:0,78,1498	0/1:23,2:25:7.65:8,0,498	0/1:7,5:12:4.81:5,0,81	0/1:14,5:19:71.09:105,0,71	0/1:16,11:27:99:184,0,250	0/1:6,7:13:68.17:96,0,68	0/0:39,0:38:56.78:0,57,1081	0/0:24,0:24:39.13:0,39,749	0/0:22,0:22:3.28:0,3,559	0/1:2,2:4:22.69:55,0,23	0/0:20,0:20:54.06:0,54,1053	0/0:20,0:20:45.15:0,45,873	1/1:11,0:10:0.12:3,0,0	0/0:15,0:15:30.10:0,30,576	0/1:8,6:14:66:66,0,150	0/1:10,6:16:40.93:41,0,79	0/0:23,0:23:32.86:0,33,627	0/0:25,0:25:75.26:0,75,1508	0/0:19,0:19:54.19:0,54,1067	0/0:17,0:17:51.18:0,51,1036
chr10	6394490	.	CACA	C	912.18	PASS	AB=0.918;AC=14;AF=0.250;AN=56;BaseQRankSum=10.369;DP=721;FS=5.522;HRun=0;HaplotypeScore=250.8063;InbreedingCoeff=0.0111;MQ=49.87;MQ0=9;MQRankSum=-9.679;QD=4.80;ReadPosRankSum=2.282;VQSLOD=1.8121;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,123,2728	1/1:9,0:9:8.44:151,8,0	0/0:73,0:37:99:0,102,2107	0/0:62,0:33:79.24:0,79,1550	0/1:18,1:19:25.70:66,0,26	0/0:28,0:27:51.44:0,51,943	0/0:32,0:34:54.33:0,54,1129	0/0:50,0:50:99:0,147,3223	0/0:36,0:36:84:0,84,1647	0/1:23,2:25:52.28:52,0,842	0/1:9,3:12:9.75:10,0,120	0/1:18,1:19:99:126,0,161	0/1:23,4:27:99:318,0,264	0/1:13,0:13:99:122,0,129	0/0:40,0:39:62.62:0,63,1118	0/0:25,0:25:45.12:0,45,863	0/1:21,0:21:15.17:15,0,763	0/1:3,1:4:12.26:56,0,12	0/0:20,0:19:54.19:0,54,1276	0/0:20,0:20:45.02:0,45,855	1/1:9,1:9:5.40:18,5,0	0/0:16,0:16:32.96:0,33,611	0/1:13,2:15:87.84:88,0,312	0/1:16,0:16:51.51:52,0,118	0/0:24,0:24:36.32:0,36,579	0/0:25,0:25:75.26:0,75,1758	0/0:20,0:20:60.19:0,60,1346	0/0:17,0:17:51.18:0,51,1206
chr10	6394492	.	CA	C	211.63	PASS	AB=0.758;AC=9;AF=0.161;AN=56;BaseQRankSum=8.440;DP=720;FS=3.671;HRun=2;HaplotypeScore=230.4100;InbreedingCoeff=-0.1646;MQ=50.06;MQ0=10;MQRankSum=-8.364;QD=1.50;ReadPosRankSum=1.342;VQSLOD=-0.5738;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,120,1728	0/1:5,4:9:8.86:56,0,9	0/0:71,0:35:99:0,99,1345	0/0:60,0:31:62.29:0,62,906	0/1:14,5:19:10.15:10,0,61	0/0:27,0:26:42.55:0,43,582	0/0:35,0:35:64.81:0,65,831	0/0:52,0:51:99:0,121,2012	0/0:38,0:38:75.65:0,76,1070	0/0:21,3:24:18.39:0,18,678	0/0:7,5:12:4.78:0,5,132	0/1:14,5:19:44.54:45,0,142	0/1:15,11:26:99:108,0,320	0/1:5,7:12:42.73:43,0,135	0/0:40,0:39:51:0,51,683	0/0:28,0:28:53.98:0,54,654	0/1:20,0:21:35.79:36,0,467	0/1:4,1:5:7.19:7,0,17	0/0:20,0:19:54.18:0,54,809	0/0:20,0:20:42.01:0,42,549	0/0:9,0:8:7.71:0,8,33	0/0:16,0:16:27.05:0,27,374	0/1:10,6:15:24.54:25,0,245	0/1:8,6:14:19.15:19,0,92	0/0:25,0:25:27.52:0,28,371	0/0:25,0:25:75.25:0,75,1106	0/0:20,0:20:57.19:0,57,854	0/0:17,0:17:51.17:0,51,764
chr10	6394495	.	TACACACACAGCAC	T	2940.62	PASS	AB=0.977;AC=19;AF=0.339;AN=56;BaseQRankSum=10.808;DP=712;FS=5.218;HRun=0;HaplotypeScore=319.2939;InbreedingCoeff=0.5534;MQ=49.25;MQ0=12;MQRankSum=-10.043;QD=13.07;ReadPosRankSum=0.560;VQSLOD=1.4165;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:78.25:0,78,4519	1/1:8,1:9:3.03:327,3,0	0/0:66,0:30:39.09:0,39,1135	0/1:58,0:30:2.96:3,0,582	1/1:19,0:19:0.14:148,0,0	0/0:29,0:28:42.11:0,42,2380	0/0:36,0:36:55.90:0,56,2921	0/0:46,0:45:81.27:0,81,3717	0/0:35,0:35:63.22:0,63,3708	1/1:24,0:24:2.30:215,2,0	1/1:13,0:13:2.94:123,3,0	0/1:19,1:20:29.08:312,0,29	1/1:26,0:26:23.08:951,23,0	1/1:12,0:12:18.37:374,18,0	0/0:38,0:37:46.51:0,47,2711	0/0:28,0:28:36.12:0,36,2010	0/0:22,0:22:33.75:0,34,2303	0/1:4,0:4:3.48:131,0,3	0/0:22,0:19:36.12:0,36,2238	0/0:21,0:21:36.12:0,36,2112	0/1:10,0:9:0:0,0,0	0/0:17,0:17:30.02:0,30,1510	1/1:15,1:15:5.49:297,5,0	0/1:13,1:14:8.63:228,0,9	0/0:24,0:24:27.01:0,27,1447	0/0:25,0:25:48.16:0,48,2567	0/0:20,0:20:51.18:0,51,2883	0/0:18,0:18:48.15:0,48,2628
chr10	6394500	.	ACACAGC	A	1355.23	PASS	AB=0.790;AC=12;AF=0.214;AN=56;BaseQRankSum=8.850;DP=714;FS=0.000;HRun=0;HaplotypeScore=257.5766;InbreedingCoeff=-0.0970;MQ=49.59;MQ0=15;MQRankSum=-8.795;QD=6.81;ReadPosRankSum=1.543;VQSLOD=1.7081;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,108,3493	0/1:6,4:10:3:170,0,3	0/0:68,0:31:86.86:0,87,2055	0/0:57,0:29:37.30:0,37,1502	0/1:13,5:19:4.25:73,0,4	0/0:27,0:27:41.76:0,42,1523	0/1:36,0:36:31.83:32,0,2339	0/0:49,0:48:99:0,141,4444	0/0:35,0:35:69.24:0,69,2482	0/1:19,2:21:76.39:76,0,587	0/1:7,5:12:30.32:46,0,30	0/1:14,5:19:99:155,0,110	0/1:15,11:26:99:458,0,183	0/1:5,7:12:53.73:194,0,54	0/0:39,0:38:49.11:0,49,1753	0/0:27,0:27:42.14:0,42,1504	0/0:23,0:23:42.50:0,42,1563	0/1:3,1:4:33.13:46,0,33	0/0:21,0:17:51.18:0,51,1701	0/0:22,0:22:39.13:0,39,1407	0/1:10,0:9:0:0,0,0	0/0:18,0:18:30.10:0,30,1096	0/1:10,6:15:99:129,0,157	0/1:8,6:14:36.30:124,0,36	0/0:24,0:24:26.34:0,26,963	0/0:26,0:26:78.25:0,78,2441	0/0:21,0:21:63.22:0,63,2218	0/0:18,0:18:54.18:0,54,1885
chr10	6394504	.	AG	A	262.22	PASS	AB=0.853;AC=6;AF=0.107;AN=56;BaseQRankSum=7.661;DP=705;FS=1.735;HRun=1;HaplotypeScore=209.0381;InbreedingCoeff=0.2462;MQ=51.24;MQ0=16;MQRankSum=-5.887;QD=3.16;ReadPosRankSum=-1.043;VQSLOD=-0.5476;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,1:38:99:0,102,1630	0/0:7,2:10:2.84:0,3,10	0/0:61,0:27:70.51:0,71,918	0/0:55,2:30:29.70:0,30,847	0/0:12,5:18:3.16:0,3,46	0/0:27,0:27:42.03:0,42,665	0/0:30,0:34:59.15:0,59,1043	0/0:53,0:52:99:0,154,2419	0/0:35,0:35:67.46:0,67,1099	0/1:13,5:18:85.75:86,0,402	0/0:7,4:12:12:0,12,162	0/0:12,6:19:16.90:0,17,139	0/1:18,7:26:99:136,0,273	0/0:13,0:13:0.95:0,1,134	0/0:37,0:36:47.70:0,48,765	0/0:27,0:27:48.16:0,48,761	0/1:21,2:23:80.33:80,0,604	1/1:1,3:4:7.26:75,7,0	0/0:23,0:19:57.19:0,57,908	0/0:22,0:22:39.13:0,39,622	0/1:10,1:11:0:0,0,0	0/0:17,0:17:30.10:0,30,478	0/0:12,4:15:20.55:0,21,293	0/0:11,3:15:11.68:0,12,111	0/0:23,0:23:33.11:0,33,527	0/0:24,0:24:72.23:0,72,1127	0/0:21,0:21:63.21:0,63,1001	0/0:17,0:17:51.17:0,51,806
chr10	6394508	.	C	CAAT	777.10	PASS	AB=0.979;AC=13;AF=0.232;AN=56;BaseQRankSum=9.777;DP=737;FS=17.032;HRun=0;HaplotypeScore=235.9918;InbreedingCoeff=0.1122;MQ=50.46;MQ0=16;MQRankSum=-8.948;QD=4.09;ReadPosRankSum=-2.618;VQSLOD=1.0486;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,99,1711	1/1:12,1:13:23.13:153,23,0	0/0:65,0:32:70.20:0,70,1117	0/0:55,0:28:65.76:0,66,1041	0/1:23,0:23:28.63:74,0,29	0/0:27,0:27:45.02:0,45,764	0/0:36,0:36:74.03:0,74,1250	0/0:53,0:52:99:0,141,2426	0/0:36,0:36:69.24:0,69,1209	0/1:22,0:22:99:219,0,468	0/1:15,1:16:46.66:47,0,125	0/1:22,1:23:76.85:77,0,151	0/1:25,1:26:99:130,0,273	0/1:12,0:12:44.91:45,0,164	0/0:38,0:37:56.61:0,57,937	0/0:27,0:27:48.16:0,48,840	0/0:25,0:25:53.38:0,53,828	1/1:5,0:5:2.80:45,3,0	0/0:24,0:20:57.20:0,57,995	0/0:21,0:21:42.14:0,42,736	0/1:16,0:15:0.25:0,0,0	0/0:18,0:18:30.10:0,30,526	0/1:17,0:16:76.47:76,0,282	0/1:16,1:17:66.88:67,0,82	0/0:22,0:22:33.10:0,33,582	0/0:22,0:22:63.22:0,63,1109	0/0:22,0:22:60.21:0,60,1056	0/0:18,0:18:54.15:0,54,893
chr10	6394569	.	CCTCTCTCTCTCTCTCTCTCTCT	C	851.35	PASS	AC=10;AF=0.185;AN=54;BaseQRankSum=3.568;DP=571;FS=1.446;HRun=0;HaplotypeScore=282.9797;InbreedingCoeff=0.7192;MQ=64.22;MQ0=16;MQRankSum=-3.082;QD=11.66;ReadPosRankSum=-0.644;VQSLOD=2.3108;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:27.09:0,27,2075	1/1:9,0:10:3.01:154,3,0	0/0:24,0:10:3.01:0,3,162	0/0:44,0:21:3.48:0,3,162	1/1:11,9:20:8.99:311,9,0	0/0:22,0:21:25.33:0,25,1711	0/0:22,0:23:29.40:0,29,2142	0/0:46,0:44:31.27:0,31,1200	0/0:24,0:23:24.55:0,25,1624	1/1:14,3:17:9.02:399,9,0	1/1:7,5:12:3.01:116,3,0	0/0:17,0:17:30.10:0,30,2182	0/0:16,0:17:33.11:0,33,2232	0/0:8,0:12:12.04:0,12,1159	0/0:24,0:25:29.82:0,30,2516	0/0:18,0:19:21.07:0,21,1310	0/0:24,0:29:60.18:0,60,4543	./.	0/0:20,0:20:23.75:0,24,1523	0/0:15,0:16:21.07:0,21,1487	1/1:14,0:14:0.47:1,0,0	0/0:23,0:24:27.09:0,27,1825	0/0:11,0:11:18.05:0,18,1076	0/0:10,0:15:17.57:0,18,1549	0/0:17,0:15:9.03:0,9,306	0/0:19,0:20:44.51:0,45,2598	0/0:17,0:22:42.14:0,42,2629	0/0:10,0:13:18.06:0,18,1217
chr10	6396251	.	GA	G	3783.85	PASS	AB=1.000;AC=41;AF=0.732;AN=56;BaseQRankSum=16.089;DP=615;FS=0.000;HRun=1;HaplotypeScore=108.1583;InbreedingCoeff=0.8413;MQ=84.74;MQ0=0;MQRankSum=-2.561;QD=8.48;ReadPosRankSum=8.562;VQSLOD=0.3821;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,102,1456	1/1:6,0:6:2.04:39,2,0	0/0:18,0:18:47.43:0,47,624	0/0:32,0:32:13.93:0,14,854	1/1:8,0:8:21.29:106,21,0	1/1:18,1:19:23:188,23,0	1/1:29,0:29:38.29:199,38,0	0/0:37,0:37:99:0,102,1476	1/1:26,0:26:54.37:223,54,0	1/1:17,0:17:37.33:144,37,0	1/1:11,0:11:26.43:117,26,0	1/1:14,0:14:36.35:155,36,0	1/1:28,2:30:54.13:337,54,0	1/1:33,0:33:4.78:193,5,0	1/1:31,0:31:24.78:213,25,0	1/1:20,0:20:22.81:138,23,0	1/1:34,0:34:81.82:311,82,0	1/1:29,0:29:73.60:281,74,0	1/1:19,0:19:7.97:93,8,0	1/1:13,1:14:9.24:132,9,0	1/1:45,1:46:99:433,108,0	0/1:19,0:19:6.01:103,0,6	1/1:14,0:14:26.70:123,27,0	1/1:16,0:16:14.81:113,15,0	1/1:9,2:11:28.22:143,28,0	0/0:13,0:13:32.08:0,32,501	0/0:29,0:29:87.24:0,87,1303	0/0:6,0:6:18.06:0,18,287
chr10	6396252	.	AC	A	13460.69	PASS	AB=0.947;AC=44;AF=0.786;AN=56;BaseQRankSum=10.158;DP=611;FS=0.750;HRun=5;HaplotypeScore=74.8057;InbreedingCoeff=0.8343;MQ=85.46;MQ0=0;MQRankSum=-2.253;QD=27.70;ReadPosRankSum=5.230;VQSLOD=4.7253;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:75.59:0,76,1127	1/1:2,4:6:15.04:169,15,0	0/0:18,0:18:30.64:0,31,490	0/1:32,1:33:30.84:31,0,616	1/1:0,8:8:24.07:272,24,0	1/1:2,17:19:51.15:577,51,0	1/1:1,28:29:72.21:817,72,0	0/0:37,0:37:86.64:0,87,1174	1/1:0,26:26:63.18:714,63,0	1/1:0,17:17:51.15:578,51,0	1/1:0,11:11:30.09:340,30,0	1/1:0,14:14:42.12:476,42,0	1/1:3,27:30:87.24:982,87,0	1/1:2,30:32:78.22:885,78,0	1/1:2,29:31:78.22:885,78,0	1/1:0,19:19:54.15:613,54,0	1/1:0,34:34:96.27:1089,96,0	1/1:0,29:29:87.25:987,87,0	1/1:3,16:19:48.08:512,48,0	1/1:1,12:13:36.10:404,36,0	1/1:2,43:45:99:1429,126,0	1/1:1,17:18:45.13:511,45,0	1/1:0,14:14:30.09:341,30,0	1/1:1,15:16:42.12:476,42,0	1/1:2,9:11:33.09:373,33,0	0/1:11,1:12:0.93:1,0,377	0/0:29,0:29:78.26:0,78,1066	0/0:6,0:6:18.06:0,18,245
chr10	6396451	.	A	AC	4425.93	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-5.892;DP=622;FS=0.810;HRun=3;HaplotypeScore=75.1049;InbreedingCoeff=0.9927;MQ=90.61;MQ0=0;MQRankSum=-0.897;QD=34.85;ReadPosRankSum=0.727;VQSLOD=5.3550;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,99,1173	1/1:1,10:11:27.09:378,27,0	0/0:24,0:24:49.97:0,50,745	0/0:29,0:30:61.08:0,61,729	1/1:1,17:18:45.06:603,45,0	0/0:20,0:20:51.12:0,51,586	0/0:30,0:30:78.20:0,78,903	0/0:21,0:21:51.14:0,51,594	0/0:20,0:20:60.18:0,60,719	1/1:2,18:20:21.18:720,21,0	1/1:1,15:16:45.06:593,45,0	0/0:26,0:26:78.24:0,78,934	0/0:24,0:24:72.18:0,72,837	0/0:34,0:34:99:0,99,1173	0/0:28,0:28:81.25:0,81,972	0/0:14,0:14:36.11:0,36,432	0/0:30,0:30:90.28:0,90,1079	1/1:2,30:32:87.09:1168,87,0	0/0:19,0:19:54.15:0,54,628	0/0:15,0:15:42.10:0,42,480	1/1:3,27:30:69.23:966,69,0	0/0:19,0:19:54.15:0,54,636	0/0:15,0:15:39.11:0,39,459	0/0:25,0:25:72.22:0,72,864	0/0:19,0:19:57.17:0,57,683	0/0:14,0:14:36.11:0,36,431	0/0:26,0:25:72.20:0,72,851	0/0:4,0:4:12.04:0,12,144
chr10	6397600	.	GA	G	3938.48	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=13.211;DP=669;FS=8.456;HRun=8;HaplotypeScore=62.5409;InbreedingCoeff=0.9860;MQ=69.38;MQ0=0;MQRankSum=-0.386;QD=26.26;ReadPosRankSum=1.621;VQSLOD=4.3642;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,135,1607	1/1:0,12:12:36.06:348,36,0	0/0:11,0:11:15.08:0,15,169	0/0:7,0:7:9.47:0,9,94	1/1:3,20:23:57.09:550,57,0	0/0:18,0:18:51.16:0,51,616	0/0:24,0:24:72.18:0,72,853	0/0:36,0:36:96.28:0,96,1141	0/0:21,0:21:55.38:0,55,631	1/1:1,39:40:99:1130,117,0	1/1:3,21:24:54.08:521,54,0	0/0:34,0:34:87.27:0,87,1051	0/0:24,0:24:69.17:0,69,814	0/0:20,0:20:51.14:0,51,604	0/0:27,0:27:72.22:0,72,870	0/0:25,0:25:66.19:0,66,787	0/0:19,0:19:54.13:0,54,637	1/1:0,20:20:54.09:522,54,0	0/0:14,0:14:36.11:0,36,435	0/0:22,1:23:34.21:0,34,696	1/1:1,30:31:90.14:869,90,0	0/0:31,0:31:90.26:0,90,1075	0/0:19,0:19:54.17:0,54,652	0/0:25,0:25:69.20:0,69,822	0/0:18,0:18:42.10:0,42,483	0/0:26,0:27:72.09:0,72,848	0/0:29,0:29:66.19:0,66,784	0/0:16,0:16:42.13:0,42,507
chr10	6398230	.	GGTCCAGTAGACATCT	G	7532.54	PASS	AB=0.967;AC=13;AF=0.232;AN=56;BaseQRankSum=10.066;DP=652;FS=2.896;HRun=0;HaplotypeScore=285.6730;InbreedingCoeff=0.8953;MQ=85.65;MQ0=0;MQRankSum=-10.560;QD=54.98;ReadPosRankSum=-1.829;VQSLOD=4.1766;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,141,9529	1/1:2,9:11:24.08:1004,24,0	0/0:24,0:24:69.24:0,69,3788	0/0:24,0:24:63.15:0,63,3411	1/1:4,18:22:45.14:1522,45,0	0/0:22,0:22:66.22:0,66,4366	0/0:24,0:24:66.22:0,66,4403	0/0:35,0:35:90.30:0,90,5145	0/0:24,0:24:69.24:0,69,4825	1/1:2,21:23:60.21:2440,60,0	1/1:0,13:13:27.09:1028,27,0	0/0:22,0:22:60.21:0,60,3822	0/0:16,0:16:42.10:0,42,2688	0/0:24,0:24:66.23:0,66,4370	0/0:31,0:31:90.29:0,90,6230	0/0:30,0:30:87.30:0,87,6286	0/0:33,0:33:96.33:0,96,6786	1/1:5,10:15:24.04:930,24,0	0/0:34,0:34:99:0,102,5927	0/0:18,0:18:51.18:0,51,3802	1/1:9,15:24:14.76:561,15,0	0/0:16,0:16:48.16:0,48,3501	0/0:13,0:13:36.11:0,36,2236	0/0:17,0:17:35.33:0,35,1814	0/0:23,0:22:66.23:0,66,4822	0/1:28,1:29:46.53:47,0,5556	0/0:25,0:25:75.26:0,75,5057	0/0:12,0:12:36.12:0,36,2487
chr10	6398267	.	CTGGAGAGA	C	5312.90	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=9.868;DP=682;FS=0.995;HRun=0;HaplotypeScore=216.1707;InbreedingCoeff=0.9949;MQ=63.78;MQ0=0;MQRankSum=-11.948;QD=56.52;ReadPosRankSum=1.048;VQSLOD=4.5177;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,117,4635	0/0:11,0:11:30.10:0,30,1205	0/0:26,0:24:65.79:0,66,2339	0/0:32,0:31:71.52:0,72,2821	0/0:22,0:22:33.11:0,33,1404	0/0:14,0:14:30.10:0,30,1257	0/0:26,0:26:63.22:0,63,2615	0/0:38,0:38:90.30:0,90,3475	0/0:24,0:24:63.22:0,63,2620	0/0:26,0:26:69.23:0,69,2797	0/0:16,0:16:18.04:0,18,763	1/1:2,19:21:51.18:1360,51,0	1/1:3,18:21:45.15:1201,45,0	1/1:3,21:25:66.23:1752,66,0	0/0:30,0:30:84.27:0,84,3424	0/0:28,0:28:75.26:0,75,3133	0/0:39,0:39:99:0,108,4536	0/0:12,0:12:30.10:0,30,1213	0/0:25,0:25:54.19:0,54,2074	0/0:20,0:20:51.18:0,51,2045	0/0:31,0:31:38.72:0,39,1629	0/0:20,0:20:45.14:0,45,1792	1/1:3,10:13:21.07:518,21,0	1/1:4,10:14:18.53:482,19,0	0/0:31,0:30:69.24:0,69,2844	0/0:28,0:28:75.25:0,75,2969	0/0:29,0:29:81.25:0,81,3316	0/0:12,0:12:30.10:0,30,1251
chr10	6398596	.	A	AACATACACACAC	13738.85	PASS	AB=0.800;AC=42;AF=0.750;AN=56;BaseQRankSum=4.172;DP=724;FS=5.544;HRun=0;HaplotypeScore=209.7166;InbreedingCoeff=0.7118;MQ=54.48;MQ0=12;MQRankSum=-9.264;QD=25.87;ReadPosRankSum=0.078;VQSLOD=3.1148;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:91.71:0,92,2028	1/1:11,0:11:17.94:622,18,0	0/0:38,0:10:20.31:0,20,258	0/0:37,0:18:41.53:0,42,403	1/1:10,11:24:18.04:825,18,0	1/1:34,0:32:45.62:657,46,0	1/1:27,0:25:30.52:636,31,0	0/0:43,0:47:99:0,137,1699	1/1:6,1:24:5.99:307,6,0	1/1:36,0:36:99:2464,99,0	1/1:20,0:20:26.59:609,27,0	1/1:7,10:18:3.48:184,3,0	1/1:6,13:24:18.51:959,19,0	1/1:8,15:26:6.49:349,6,0	1/1:8,21:34:12.04:673,12,0	1/1:5,17:27:9.03:513,9,0	1/1:4,0:24:15.05:699,15,0	1/1:12,0:12:26.73:617,27,0	1/1:22,0:21:55:694,55,0	1/1:4,0:20:6.91:271,7,0	1/1:23,0:23:9.03:314,9,0	1/1:9,15:27:14.80:717,15,0	1/1:5,13:21:6.02:367,6,0	1/1:6,15:24:12.04:709,12,0	0/1:9,0:27:64.09:548,0,64	0/1:23,0:24:4.49:4,0,1246	0/0:23,0:24:33.41:0,33,1333	0/0:11,0:10:30.02:0,30,684
chr10	6398598	.	C	CAT	3734.88	PASS	AB=0.935;AC=35;AF=0.625;AN=56;BaseQRankSum=9.394;DP=700;FS=2.498;HRun=0;HaplotypeScore=175.2516;InbreedingCoeff=0.4040;MQ=51.48;MQ0=12;MQRankSum=-7.575;QD=7.90;ReadPosRankSum=3.637;VQSLOD=3.5944;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:36:92.89:0,93,1061	1/1:7,4:11:16.48:163,16,0	0/0:39,0:9:20.31:0,20,197	0/0:37,0:16:44.33:0,44,416	1/1:18,3:21:6.86:147,7,0	1/1:34,0:32:27.81:353,28,0	1/1:28,0:26:31.87:364,32,0	0/0:50,0:50:99:0,130,1353	0/1:18,0:17:0.19:29,0,0	1/1:37,0:37:48.87:769,49,0	1/1:20,3:23:6.79:267,7,0	1/1:17,0:17:3:34,3,0	0/1:22,0:22:4.73:132,0,5	0/1:22,0:22:15:42,0,15	0/1:31,0:31:8.97:112,0,9	1/1:22,0:22:8.92:84,9,0	1/1:22,0:22:6.13:129,6,0	1/1:10,3:13:26.69:262,27,0	1/1:24,0:22:49.67:369,50,0	1/1:17,0:17:9.10:61,9,0	0/1:7,17:24:45.49:68,0,45	0/1:23,1:24:11.22:88,0,11	1/1:20,0:20:6.01:68,6,0	1/1:18,0:18:14.31:126,14,0	0/1:25,0:25:19.11:68,0,19	0/0:25,0:25:1.50:0,1,708	0/0:26,0:26:68.97:0,69,753	0/0:12,0:11:30.01:0,30,366
chr10	6398620	.	C	CACACACACAA	8664.49	PASS	AB=0.996;AC=27;AF=0.482;AN=56;BaseQRankSum=9.573;DP=608;FS=15.289;HRun=0;HaplotypeScore=203.8282;InbreedingCoeff=-0.0959;MQ=61.38;MQ0=17;MQRankSum=-8.201;QD=22.27;ReadPosRankSum=0.518;VQSLOD=3.0123;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:40:77.97:0,78,1764	1/1:8,2:12:36.02:786,36,0	0/0:43,0:19:38.84:0,39,452	0/0:40,0:21:23.92:0,24,410	1/1:18,3:21:50.75:688,51,0	0/1:34,0:32:99:334,0,102	0/1:29,0:27:69.69:241,0,70	0/0:41,0:41:77.34:0,77,1297	0/1:15,0:15:94.77:186,0,95	1/1:33,0:33:77.39:968,77,0	1/1:21,1:24:47.54:1110,48,0	0/1:10,0:10:39.43:101,0,39	0/1:18,0:18:99:404,0,123	0/1:15,0:15:89.53:90,0,116	0/1:17,0:17:89.79:300,0,90	0/1:12,0:12:81.79:202,0,82	0/1:17,0:17:72.32:262,0,72	1/1:8,3:11:29.93:854,30,0	0/1:25,0:22:99:572,0,148	0/1:13,0:13:83.34:109,0,83	1/1:25,0:25:42.25:462,42,0	0/1:17,1:18:99:276,0,116	0/1:12,0:12:98.76:201,0,99	0/1:14,0:14:15.04:213,0,15	0/1:14,0:14:99:307,0,148	0/0:21,0:21:2.53:0,3,929	0/0:21,0:21:50.95:0,51,1082	0/0:12,0:11:27.04:0,27,639
chr10	6399138	.	G	GCACACACA	11765.28	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=3.879;DP=574;FS=4.860;HRun=0;HaplotypeScore=190.7804;InbreedingCoeff=0.8708;MQ=47.80;MQ0=4;MQRankSum=-10.631;QD=29.34;ReadPosRankSum=-2.555;VQSLOD=3.6596;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:38:96.33:0,96,2388	1/1:10,0:10:21.06:509,21,0	0/0:22,0:16:24.99:0,25,412	0/0:15,0:6:9.92:0,10,188	1/1:18,0:16:1.19:14,1,0	1/1:3,12:19:33.11:1188,33,0	1/1:6,19:27:27.09:839,27,0	0/0:27,0:29:63.20:0,63,1446	1/1:7,12:21:33.11:1281,33,0	1/1:20,0:20:13.88:505,14,0	1/1:11,0:11:3.48:40,3,0	1/1:20,0:20:12.04:173,12,0	1/1:15,0:15:11.50:402,11,0	1/1:18,0:22:28.10:438,28,0	1/1:3,9:14:21.07:787,21,0	1/1:5,7:14:21.07:731,21,0	1/1:7,14:23:24.08:867,24,0	1/1:11,1:27:21.81:852,22,0	1/1:12,6:19:33.11:934,33,0	1/1:6,7:17:8.29:217,8,0	1/1:31,0:30:26.82:337,27,0	1/1:7,6:13:9.03:316,9,0	1/1:8,0:8:7.34:86,7,0	1/1:22,0:25:23.86:361,24,0	1/1:9,12:22:27.09:888,27,0	0/0:24,0:25:66.08:0,66,1392	0/0:23,0:24:66.20:0,66,1564	0/0:20,0:20:48.15:0,48,1202
chr10	6399159	.	A	AAC	1329.74	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=4.795;DP=604;FS=8.557;HRun=0;HaplotypeScore=151.9085;InbreedingCoeff=0.8616;MQ=54.90;MQ0=5;MQRankSum=-6.782;QD=11.77;ReadPosRankSum=-3.303;VQSLOD=1.9496;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:93.27:0,93,1147	0/0:10,0:10:20.88:0,21,170	0/0:38,0:25:60.01:0,60,685	0/0:28,0:22:50.65:0,51,627	0/0:21,0:19:29.53:0,30,288	0/0:18,0:18:47.61:0,48,394	0/0:23,0:23:38.89:0,39,367	0/0:37,0:37:99:0,99,1233	0/0:24,0:24:62.28:0,62,542	0/0:18,0:18:23.73:0,24,302	0/0:9,0:9:8.99:0,9,96	1/1:12,15:25:38.49:459,38,0	1/1:11,10:20:14.70:182,15,0	1/1:9,13:22:33.10:405,33,0	0/0:19,0:19:29.70:0,30,355	0/0:13,0:13:29.77:0,30,262	0/0:22,0:22:25.79:0,26,371	0/0:21,0:21:51.06:0,51,590	0/0:18,0:17:0.95:0,1,392	0/0:20,0:20:23.42:0,23,303	0/0:31,0:30:20.80:0,21,173	0/1:10,0:10:0.56:1,0,113	1/1:7,1:9:11.49:160,11,0	1/1:7,16:22:25.99:292,26,0	0/0:15,0:15:26.67:0,27,293	0/0:21,0:21:48.15:0,48,606	0/0:26,0:26:66.19:0,66,818	0/0:20,0:20:49.48:0,49,641
chr10	6399563	.	A	AAAC	3995.42	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=-8.604;DP=615;FS=2.974;HRun=0;HaplotypeScore=85.8056;InbreedingCoeff=0.9110;MQ=67.46;MQ0=0;MQRankSum=-1.620;QD=37.69;ReadPosRankSum=1.928;VQSLOD=4.3905;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:69.16:0,69,1039	0/0:11,0:11:33.10:0,33,504	0/1:12,0:12:3.70:4,0,259	0/0:16,0:14:22.95:0,23,297	0/0:31,0:31:81.25:0,81,1242	0/0:28,0:28:72.22:0,72,1121	0/0:23,0:23:66.19:0,66,1001	0/0:34,0:34:92.04:0,92,1245	0/0:18,0:18:54.18:0,54,836	0/0:26,0:26:75.07:0,75,1110	0/0:29,0:29:87.28:0,87,1343	1/1:1,17:18:39.13:839,39,0	1/1:4,21:25:54.18:1168,54,0	1/1:2,20:24:33.11:707,33,0	0/0:33,0:33:93.31:0,93,1454	0/0:20,0:20:54.18:0,54,857	0/0:27,0:27:72.16:0,72,1045	0/0:22,0:21:60.18:0,60,929	0/0:22,0:22:57.18:0,57,863	0/0:28,0:28:78.20:0,78,1167	0/0:4,0:4:12.04:0,12,191	0/0:16,0:16:48.16:0,48,743	1/1:0,16:16:39.13:850,39,0	1/1:1,10:11:21.54:429,22,0	0/0:27,0:26:75.16:0,75,1096	0/0:23,0:23:63.18:0,63,937	0/0:32,0:32:96.32:0,96,1495	0/0:15,0:15:42.11:0,42,622
chr10	6399829	.	T	TG	7625.81	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=15.859;DP=540;FS=5.228;HRun=1;HaplotypeScore=81.9582;InbreedingCoeff=0.9821;MQ=87.23;MQ0=0;MQRankSum=-7.136;QD=35.97;ReadPosRankSum=2.227;VQSLOD=5.3103;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:66.16:0,66,818	1/1:0,7:7:18.06:269,18,0	0/0:18,0:18:54.12:0,54,653	0/0:26,0:26:66.17:0,66,800	1/1:1,17:18:39.05:554,39,0	0/0:10,0:10:24.07:0,24,302	0/0:31,0:31:90.29:0,90,1162	0/0:23,0:23:66.21:0,66,845	0/0:15,0:15:45.13:0,45,570	1/1:0,12:12:36.12:528,36,0	1/1:5,12:17:48.04:599,48,0	1/1:0,18:18:51.17:750,51,0	1/1:0,25:25:50.92:763,51,0	1/1:1,17:18:51.17:763,51,0	0/0:27,0:27:81.26:0,81,1051	0/0:14,0:14:42.14:0,42,545	0/0:25,0:25:66.20:0,66,842	1/1:0,15:15:32.95:440,33,0	0/0:20,0:19:57.18:0,57,739	0/0:12,0:12:36.12:0,36,467	1/1:3,51:53:99:2062,144,0	0/0:16,0:16:42.14:0,42,539	1/1:1,7:9:15.05:224,15,0	1/1:1,18:19:45.15:674,45,0	0/0:14,0:14:33.07:0,33,410	0/0:17,1:18:6.35:0,6,556	0/0:23,0:23:69.21:0,69,881	0/0:13,0:13:36.07:0,36,447
chr10	6399920	.	G	GGC	1945.65	PASS	AC=12;AF=0.222;AN=54;BaseQRankSum=8.822;DP=495;FS=49.522;HRun=0;HaplotypeScore=77.2906;InbreedingCoeff=0.9415;MQ=47.85;MQ0=37;MQRankSum=-9.059;QD=32.43;ReadPosRankSum=-0.625;VQSLOD=1.9643;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:42:99:0,108,1576	1/1:0,4:3:9.03:162,9,0	./.	0/0:12,0:1:2.68:0,3,11	1/1:1,10:11:24.08:408,24,0	0/0:16,0:16:33.09:0,33,457	0/0:25,0:24:72.23:0,72,1078	0/0:12,0:9:27.09:0,27,413	0/0:11,0:11:27.08:0,27,392	1/1:3,11:14:35.95:602,36,0	1/1:3,10:13:30.07:506,30,0	0/0:17,0:17:50.90:0,51,438	0/0:23,0:23:56.77:0,57,457	0/0:17,0:17:41.98:0,42,391	0/0:28,0:28:63.21:0,63,961	0/0:20,0:20:60.20:0,60,918	0/0:38,0:38:90.29:0,90,1354	1/1:2,5:7:15.01:233,15,0	0/0:25,0:20:60.17:0,60,876	0/0:15,0:13:33.11:0,33,502	1/1:3,8:10:12.04:214,12,0	0/0:12,0:11:24.08:0,24,364	0/0:11,0:10:27.04:0,27,265	0/0:17,0:17:35.96:0,36,323	0/0:24,0:24:63.19:0,63,932	0/0:30,1:27:27.68:0,28,1139	0/0:18,0:18:51.17:0,51,777	0/0:9,0:8:24.08:0,24,367
chr10	6400038	.	G	GA	990.44	PASS	AC=10;AF=0.185;AN=54;BaseQRankSum=7.629;DP=572;FS=4.918;HRun=0;HaplotypeScore=92.3711;InbreedingCoeff=0.9339;MQ=53.63;MQ0=7;MQRankSum=-7.477;QD=16.24;ReadPosRankSum=-1.593;VQSLOD=4.8134;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:96.26:0,96,1279	1/1:2,9:11:18.06:256,18,0	0/0:23,0:8:14.04:0,14,203	0/0:20,0:11:26.65:0,27,323	1/1:0,16:14:18.06:273,18,0	0/0:16,0:16:42.14:0,42,543	0/0:29,0:27:74.99:0,75,875	0/0:21,0:20:60.12:0,60,781	0/0:22,0:22:60.15:0,60,755	1/1:1,10:12:32.87:492,33,0	1/1:0,17:15:8.92:83,9,0	0/0:22,0:21:63.17:0,63,851	0/0:36,0:35:99:0,102,1347	0/0:26,0:26:75.24:0,75,1027	0/0:23,0:23:66.11:0,66,798	0/0:18,0:18:51.08:0,51,608	0/0:34,0:34:99:0,99,1264	1/1:0,4:3:3.01:46,3,0	0/0:23,0:21:60.11:0,60,743	0/0:28,0:28:78.72:0,79,997	./.	0/0:17,0:17:48.16:0,48,622	0/0:11,0:11:30.10:0,30,418	0/0:17,0:16:39.10:0,39,523	0/0:22,0:22:66.20:0,66,839	0/0:27,0:27:78.25:0,78,1074	0/0:20,0:20:54.13:0,54,713	0/0:13,0:13:36.10:0,36,484
chr10	6400199	.	GAATGTTATCTTCCTGT	G	4759.08	PASS	AB=0.969;AC=11;AF=0.229;AN=48;BaseQRankSum=9.113;DP=541;FS=9.915;HRun=0;HaplotypeScore=193.4217;InbreedingCoeff=0.7795;MQ=27.23;MQ0=90;MQRankSum=-2.320;QD=58.04;ReadPosRankSum=3.124;VQSLOD=3.8244;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:27:36.08:0,36,2198	1/1:3,2:2:6.02:293,6,0	./.	./.	1/1:3,8:8:21.03:1027,21,0	0/0:21,0:17:36.12:0,36,2800	0/0:12,0:7:18.06:0,18,1225	0/0:37,0:3:9.03:0,9,571	0/0:22,0:17:39.13:0,39,2751	1/1:4,8:9:24.08:1174,24,0	1/1:3,14:15:45.15:1909,45,0	0/0:22,0:19:51.14:0,51,3438	0/0:32,0:27:81.28:0,81,6303	0/0:24,0:22:66.23:0,66,4912	0/0:35,0:28:72.21:0,72,4972	0/0:30,0:29:71.85:0,72,5484	0/0:23,0:14:36.08:0,36,2482	1/1:4,2:2:6.02:293,6,0	0/0:24,0:9:27.05:0,27,1556	0/0:17,0:16:48.12:0,48,3144	./.	0/0:17,0:13:30.10:0,30,1817	0/0:16,0:14:36.12:0,36,2090	./.	0/0:18,0:18:42.14:0,42,2454	0/1:30,1:28:62.45:62,0,5555	0/0:27,0:27:63.64:0,64,4663	0/0:13,0:6:3:0,3,38
chr10	6401073	.	GAAAC	G	5430.85	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=10.556;DP=656;FS=17.064;HRun=0;HaplotypeScore=132.6270;InbreedingCoeff=0.9982;MQ=85.07;MQ0=0;MQRankSum=-2.751;QD=41.78;ReadPosRankSum=2.497;VQSLOD=4.1826;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:33:99:0,99,2582	1/1:1,7:8:18.06:342,18,0	0/0:23,0:23:56.22:0,56,1212	0/0:24,0:24:59.83:0,60,1439	1/1:1,23:24:39.13:740,39,0	0/0:28,0:28:81.28:0,81,2127	0/0:19,0:19:54.19:0,54,1377	0/0:28,0:28:78.27:0,78,2000	0/0:26,0:26:78.27:0,78,2065	1/1:3,26:29:81.28:1508,81,0	1/1:1,15:16:30.10:569,30,0	0/0:13,0:13:39.11:0,39,964	0/0:18,0:18:54.19:0,54,1350	0/0:16,0:16:45.15:0,45,1215	0/0:40,0:40:99:0,117,3036	0/0:33,0:33:93.32:0,93,2486	0/0:16,0:16:45.15:0,45,1208	1/1:1,23:24:54.19:1021,54,0	0/0:22,0:22:63.20:0,63,1551	0/0:31,0:31:90.27:0,90,2305	1/1:3,26:29:66.11:1252,66,0	0/0:21,0:21:60.21:0,60,1572	0/0:25,0:25:75.24:0,75,1949	0/0:25,0:25:72.25:0,72,1877	0/0:17,0:17:48.16:0,48,1266	0/0:32,1:33:39.35:0,39,2423	0/0:22,0:22:63.22:0,63,1663	0/0:12,0:12:36.12:0,36,971
chr10	6401841	.	A	AG	9841.47	PASS	AB=0.935;AC=23;AF=0.411;AN=56;BaseQRankSum=-6.908;DP=655;FS=4.695;HRun=0;HaplotypeScore=68.5059;InbreedingCoeff=0.9347;MQ=91.64;MQ0=0;MQRankSum=-7.125;QD=38.75;ReadPosRankSum=3.914;VQSLOD=5.3061;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,131,1880	1/1:0,10:10:30.10:480,30,0	0/0:31,0:31:84.28:0,84,1171	0/0:25,0:25:69.15:0,69,886	1/1:0,33:33:90.31:1439,90,0	0/0:19,0:19:54.18:0,54,755	0/0:30,0:30:90.30:0,90,1256	0/0:36,0:36:99:0,108,1463	0/0:23,0:23:69.23:0,69,964	1/1:0,23:23:69.24:1104,69,0	1/1:2,12:14:36.12:575,36,0	1/1:0,21:21:63.21:1007,63,0	1/1:0,15:15:33.11:528,33,0	1/1:2,16:18:42.14:671,42,0	0/0:21,0:21:63.21:0,63,880	0/0:26,0:26:78.26:0,78,1091	0/0:28,0:28:84.28:0,84,1175	1/1:0,22:22:60.20:959,60,0	0/0:23,0:23:69.23:0,69,965	0/0:13,0:13:39.13:0,39,544	1/1:0,31:31:90.31:1439,90,0	0/0:18,0:18:54.18:0,54,755	1/1:0,16:16:42.14:671,42,0	1/1:0,22:22:60.20:959,60,0	0/0:26,0:26:78.26:0,78,1091	0/1:27,2:29:8.69:9,0,1029	0/0:19,0:19:57.18:0,57,772	0/0:12,0:12:33.09:0,33,443
chr10	6402559	.	G	GCACACA	2342.64	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=12.013;DP=748;FS=14.037;HRun=0;HaplotypeScore=226.6099;InbreedingCoeff=0.1509;MQ=72.82;MQ0=11;MQRankSum=-0.670;QD=5.90;ReadPosRankSum=1.662;VQSLOD=1.3647;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:57:70.02:0,70,2614	0/0:11,0:11:27.08:0,27,396	0/0:57,0:34:59.40:0,59,945	0/0:60,0:37:54.76:0,55,1132	0/0:22,0:22:24.04:0,24,306	0/1:31,0:31:47.20:47,0,153	0/1:21,0:21:10.66:11,0,114	0/0:31,0:31:74.78:0,75,1360	0/1:26,0:26:13.98:78,0,14	0/0:27,0:27:57.07:0,57,838	0/0:12,0:12:15.05:0,15,228	1/1:17,2:23:18.90:409,19,0	1/1:17,1:18:28.88:544,29,0	1/1:15,2:18:26.87:476,27,0	0/1:32,0:32:46.93:47,0,159	0/1:32,0:32:34.59:35,0,92	0/1:21,0:20:20.01:20,0,145	0/0:16,0:16:12.04:0,12,170	0/1:17,0:17:13.39:13,0,84	0/1:31,0:30:22.35:22,0,173	0/1:30,0:30:27.83:28,0,351	0/1:23,0:23:39.23:39,0,232	1/1:17,6:27:8.17:533,8,0	1/1:17,1:24:14.14:201,14,0	0/1:22,0:22:28.13:28,0,145	0/0:19,0:19:54.14:0,54,1007	0/0:29,0:29:72.23:0,72,1518	0/0:10,0:10:24.03:0,24,401
chr10	6402569	.	ACT	A	593.04	PASS	AB=0.937;AC=8;AF=0.143;AN=56;BaseQRankSum=1.895;DP=770;FS=2.500;HRun=0;HaplotypeScore=177.2109;InbreedingCoeff=0.5642;MQ=62.23;MQ0=12;MQRankSum=-0.799;QD=3.51;ReadPosRankSum=-5.172;VQSLOD=0.6155;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:57,1:58:99:0,110,2347	0/0:10,0:10:4.97:0,5,80	0/0:55,0:28:39.97:0,40,765	0/1:59,0:33:0.65:1,0,810	0/0:28,0:28:22.42:0,22,165	0/0:30,0:30:63.08:0,63,640	0/0:27,0:27:33.07:0,33,360	0/0:36,0:36:99:0,102,1446	0/0:26,0:26:56.13:0,56,544	0/0:32,0:32:52.03:0,52,378	0/0:14,0:14:14.37:0,14,91	0/1:19,2:21:1.24:130,0,1	1/1:13,3:16:9.96:149,10,0	1/1:18,1:19:17.50:215,18,0	0/0:34,0:34:67.61:0,68,639	0/0:31,0:30:60:0,60,625	0/0:23,0:22:51.07:0,51,529	0/0:18,0:18:11.91:0,12,85	0/0:15,0:15:13.80:0,14,266	0/0:27,0:26:75.05:0,75,734	0/0:27,0:27:17.12:0,17,139	0/0:23,0:23:56.09:0,56,518	0/1:23,4:27:1.49:159,0,1	0/1:26,1:26:19.91:76,0,20	0/0:25,0:25:57.09:0,57,560	0/0:20,0:20:60.16:0,60,974	0/0:32,0:32:42.47:0,42,1314	0/0:10,0:10:24.03:0,24,354
chr10	6402571	.	T	TCACA	11770.09	PASS	AB=1.000;AC=32;AF=0.593;AN=54;BaseQRankSum=-9.329;DP=800;FS=0.403;HRun=0;HaplotypeScore=165.8683;InbreedingCoeff=0.7830;MQ=62.14;MQ0=13;MQRankSum=0.909;QD=24.37;ReadPosRankSum=4.002;VQSLOD=4.7972;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:58:99:0,122,1901	0/0:10,0:10:4.83:0,5,12	0/0:59,0:29:30.27:0,30,512	0/1:64,0:34:13:13,0,362	0/0:26,0:26:3:0,3,27	1/1:8,24:33:48.16:1194,48,0	1/1:5,22:31:26.83:608,27,0	0/0:37,0:37:76.49:0,76,1212	1/1:2,28:31:51.65:1270,52,0	0/0:32,0:32:4.16:0,4,31	0/0:14,0:14:2.74:0,3,15	1/1:20,0:20:7.37:183,7,0	1/1:15,0:15:11.52:187,12,0	1/1:20,0:20:27.80:328,28,0	1/1:7,26:33:51.65:1270,52,0	1/1:4,28:31:51.18:1268,51,0	1/1:6,16:25:39.13:952,39,0	./.	1/1:6,8:15:26.55:526,27,0	1/1:8,18:29:62.62:1423,63,0	0/1:25,0:25:0:0,0,0	1/1:6,17:24:36.12:895,36,0	1/1:28,0:28:22.11:352,22,0	1/1:27,0:26:14.05:182,14,0	1/1:4,21:29:45.15:1120,45,0	0/0:19,0:19:48.16:0,48,790	0/0:29,0:32:86.81:0,87,1281	0/0:10,0:10:15.05:0,15,253
chr10	6402585	.	A	AATG	366.98	PASS	AB=1.000;AC=9;AF=0.167;AN=54;BaseQRankSum=2.608;DP=754;FS=28.447;HRun=0;HaplotypeScore=188.3685;InbreedingCoeff=0.7014;MQ=58.67;MQ0=16;MQRankSum=-2.955;QD=5.92;ReadPosRankSum=-2.175;VQSLOD=0.7356;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:59,0:59:99:0,149,2622	1/1:4,3:7:14.84:245,15,0	0/0:65,0:30:63.47:0,63,1258	0/0:64,0:33:71.34:0,71,1041	1/1:18,0:18:2.98:24,3,0	0/0:28,0:28:56.27:0,56,503	0/0:34,0:34:38.91:0,39,429	0/0:39,0:39:99:0,108,1956	0/0:33,0:33:61.92:0,62,513	0/1:16,0:16:11.02:118,0,11	1/1:9,0:9:3.01:41,3,0	0/0:18,0:18:23.24:0,23,194	0/0:12,0:12:17.39:0,17,164	0/0:19,0:19:38.79:0,39,529	0/0:31,0:31:59.62:0,60,522	0/0:32,0:31:62.41:0,62,565	0/0:26,0:25:47.57:0,48,430	./.	0/0:20,0:20:57.09:0,57,804	0/0:31,0:30:77.75:0,78,769	1/1:4,7:11:11.87:80,12,0	0/0:22,0:22:40.43:0,40,319	0/0:27,0:27:37.29:0,37,422	0/0:25,0:24:0.64:0,1,215	0/0:29,0:29:59.93:0,60,631	0/0:20,0:20:60.21:0,60,1113	0/0:37,0:37:99:0,102,1805	0/0:7,0:7:15.05:0,15,280
chr10	6402601	.	ATAG	A	41.14	PASS	AB=0.943;AC=12;AF=0.222;AN=54;BaseQRankSum=5.985;DP=711;FS=1.992;HRun=0;HaplotypeScore=183.6980;InbreedingCoeff=0.3772;MQ=61.33;MQ0=6;MQRankSum=-4.823;QD=0.24;ReadPosRankSum=-2.209;VQSLOD=2.0883;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:59,0:59:99:0,139,3757	./.	0/0:62,0:40:49.24:0,49,2029	0/1:53,0:33:6.28:6,0,1272	1/1:18,0:18:5.57:31,6,0	0/0:30,0:30:48.79:0,49,1512	0/0:29,0:29:51.16:0,51,1168	0/0:35,0:35:99:0,105,2408	0/0:28,0:28:64.43:0,64,1399	1/1:16,0:16:3.81:23,4,0	1/1:9,0:9:2.94:19,3,0	0/0:15,0:15:31.87:0,32,770	0/1:10,1:11:20.12:20,0,574	0/1:20,1:21:46.97:47,0,1018	0/0:32,0:32:77.46:0,77,1799	0/0:26,0:26:63.19:0,63,1432	0/0:26,0:26:57.17:0,57,1354	1/1:14,0:14:0.89:2,1,0	0/0:17,0:17:51.18:0,51,1255	0/0:28,0:28:84.29:0,84,2063	0/0:10,0:9:6.49:0,6,100	0/0:21,0:21:63.21:0,63,1453	0/1:24,3:27:30.44:30,0,1381	0/0:22,0:22:17.76:0,18,808	0/0:33,0:33:78.27:0,78,1891	0/0:19,0:19:57.20:0,57,1379	0/0:35,0:35:99:0,99,2292	0/0:8,0:8:21.07:0,21,517
chr10	6402612	.	A	AAC	3442.09	PASS	AB=0.913;AC=17;AF=0.304;AN=56;BaseQRankSum=-0.572;DP=727;FS=7.566;HRun=0;HaplotypeScore=161.2762;InbreedingCoeff=0.7892;MQ=61.11;MQ0=7;MQRankSum=-2.003;QD=20.25;ReadPosRankSum=0.401;VQSLOD=3.8489;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:58:99:0,117,1527	1/1:0,0:4:2.50:9,2,0	0/0:65,0:42:77.38:0,77,892	0/0:57,0:38:58.75:0,59,712	0/1:19,0:21:6.01:6,0,7	0/0:28,0:28:44.66:0,45,589	0/0:25,0:27:38.93:0,39,449	1/1:11,25:39:84.19:1288,84,0	0/0:26,0:26:42.13:0,42,522	1/1:17,0:17:4.32:63,4,0	0/0:9,0:9:1.72:0,2,4	0/0:15,0:15:27.09:0,27,337	0/0:12,0:12:27.09:0,27,335	0/0:22,0:22:45.09:0,45,531	0/0:30,0:30:63.18:0,63,775	0/0:22,0:22:39.12:0,39,488	0/0:29,0:29:63.20:0,63,786	1/1:14,0:14:2.60:10,3,0	0/0:25,0:23:54.15:0,54,653	0/0:24,0:24:48.15:0,48,600	1/1:4,0:13:2.97:20,3,0	0/0:23,0:23:48.08:0,48,554	0/0:28,0:28:48.11:0,48,586	0/0:23,0:23:35.83:0,36,415	0/0:34,0:34:69.20:0,69,840	1/1:3,17:20:51.15:809,51,0	1/1:7,26:34:66.23:1088,66,0	1/1:3,4:7:9.03:149,9,0
chr10	6402841	.	C	CT	2878.47	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-2.241;DP=590;FS=2.218;HRun=0;HaplotypeScore=84.7877;InbreedingCoeff=0.9986;MQ=92.83;MQ0=0;MQRankSum=-2.039;QD=39.43;ReadPosRankSum=0.815;VQSLOD=4.0321;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:96.21:0,96,1278	0/0:15,0:15:45.14:0,45,611	0/0:29,0:29:68.21:0,68,926	0/0:21,0:21:59.98:0,60,785	0/0:28,0:28:72.68:0,73,970	0/0:21,0:21:57.15:0,57,773	0/0:27,0:27:78.26:0,78,1080	0/0:28,0:28:72.07:0,72,908	0/0:23,0:23:66.22:0,66,919	0/0:14,0:14:36.12:0,36,497	0/0:15,0:15:42.14:0,42,585	1/1:0,8:8:21.07:335,21,0	1/1:0,18:18:45.15:719,45,0	1/1:0,11:11:27.09:431,27,0	0/0:24,0:24:69.21:0,69,930	0/0:13,0:13:33.11:0,33,461	0/0:37,0:37:99:0,108,1501	0/0:22,0:22:66.22:0,66,920	0/0:22,0:22:57.19:0,57,793	0/0:19,0:19:54.17:0,54,735	0/0:30,0:30:90.29:0,90,1239	0/0:24,0:24:69.19:0,69,937	1/1:0,22:22:60.06:898,60,0	1/1:0,14:14:42.14:671,42,0	0/0:23,0:23:69.16:0,69,921	0/0:20,0:20:57.19:0,57,792	0/0:20,0:20:60.15:0,60,812	0/0:10,0:10:29.31:0,29,384
chr10	6404127	.	C	CAA	3517.64	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=6.658;DP=529;FS=7.384;HRun=9;HaplotypeScore=84.5394;InbreedingCoeff=0.8634;MQ=75.22;MQ0=2;MQRankSum=0.064;QD=27.48;ReadPosRankSum=-3.607;VQSLOD=2.6897;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:42.09:0,42,447	1/1:1,2:2:3.01:46,3,0	0/0:10,0:10:11.87:0,12,108	0/1:16,0:16:8:8,0,264	1/1:7,21:28:62.61:872,63,0	0/0:27,0:26:75.18:0,75,798	0/0:12,0:12:27.05:0,27,287	0/0:32,0:32:81.15:0,81,850	0/0:15,0:15:42.10:0,42,447	1/1:7,16:25:63.15:878,63,0	1/1:4,19:25:59.64:845,60,0	0/0:2,0:16:35.67:0,36,156	0/0:2,0:20:40.96:0,41,179	0/0:1,0:14:32.93:0,33,144	0/0:21,0:21:48.10:0,48,511	0/0:18,0:18:51.13:0,51,543	0/0:18,0:18:39.04:0,39,415	1/1:6,15:21:45.15:690,45,0	0/0:14,0:14:36.06:0,36,383	0/0:27,0:27:72.12:0,72,750	1/1:4,6:10:14.96:178,15,0	0/0:12,0:12:27.04:0,27,279	0/0:1,0:25:54.89:0,55,239	0/0:3,0:8:13.72:0,14,60	0/0:23,0:23:57.10:0,57,597	0/0:25,0:25:65.91:0,66,702	0/0:22,0:22:57.14:0,57,606	0/0:24,0:25:74.93:0,75,778
chr10	6404365	.	TC	T	4974.05	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=15.028;DP=682;FS=0.000;HRun=4;HaplotypeScore=83.9453;InbreedingCoeff=0.9962;MQ=82.84;MQ0=0;MQRankSum=0.565;QD=31.28;ReadPosRankSum=3.040;VQSLOD=5.2242;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:81.24:0,81,1081	0/0:15,0:15:45.14:0,45,603	0/0:20,0:20:51.12:0,51,638	0/0:21,0:21:40.28:0,40,562	0/0:26,0:26:75.21:0,75,984	0/0:26,0:26:63.21:0,63,867	0/0:25,0:25:75.24:0,75,1016	0/0:33,0:33:96.30:0,96,1283	0/0:33,0:33:99:0,99,1340	0/0:24,0:24:72.15:0,72,931	0/0:22,0:22:55.07:0,55,780	1/1:1,29:30:69.21:825,69,0	1/1:1,24:25:66.20:790,66,0	1/1:0,37:37:99:1293,108,0	0/0:26,0:26:78.25:0,78,1060	0/0:21,0:21:63.19:0,63,837	0/0:20,0:20:60.20:0,60,826	0/0:31,0:31:90.22:0,90,1163	0/0:12,0:12:33.07:0,33,418	0/0:19,0:19:57.19:0,57,786	0/0:24,0:24:72.14:0,72,919	0/0:17,0:17:48.15:0,48,645	1/1:1,27:28:72.13:845,72,0	1/1:0,39:39:99:1221,102,0	0/0:17,0:17:48.15:0,48,646	0/0:29,0:29:81.25:0,81,1089	0/0:29,0:28:86.41:0,86,1079	0/0:5,0:5:15.05:0,15,207
chr10	6405020	.	A	AT	14254.50	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=-6.219;DP=680;FS=5.640;HRun=6;HaplotypeScore=72.5099;InbreedingCoeff=0.9996;MQ=78.38;MQ0=0;MQRankSum=-2.242;QD=29.03;ReadPosRankSum=5.930;VQSLOD=5.1407;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:78.17:0,78,795	1/1:0,10:10:30.10:377,30,0	0/0:23,0:23:48.02:0,48,467	0/0:13,0:13:36.02:0,36,346	1/1:4,35:39:99:1229,99,0	1/1:2,23:25:66.21:830,66,0	1/1:2,12:14:27.09:340,27,0	0/0:51,0:51:99:0,129,1282	1/1:0,23:23:60.19:754,60,0	1/1:6,31:37:96.27:1168,96,0	1/1:1,19:20:54.17:679,54,0	1/1:14,0:14:38.80:303,39,0	1/1:18,0:18:47.73:363,48,0	1/1:22,0:22:47.77:374,48,0	1/1:1,20:21:54.17:679,54,0	1/1:1,19:20:48.15:604,48,0	1/1:3,28:31:78.25:981,78,0	1/1:4,17:21:39.12:491,39,0	1/1:1,11:12:33.07:398,33,0	1/1:6,42:48:99:1502,123,0	1/1:1,19:20:54.17:679,54,0	1/1:5,28:33:72.23:906,72,0	1/1:21,0:21:56.64:422,57,0	1/1:14,1:15:35.76:270,36,0	1/1:1,26:27:72.23:906,72,0	0/0:26,0:26:72.16:0,72,730	0/0:24,0:23:72.15:0,72,727	0/0:24,0:24:72.16:0,72,732
chr10	6405025	.	T	TC	6238.09	PASS	AB=0.997;AC=35;AF=0.625;AN=56;BaseQRankSum=14.274;DP=681;FS=10.202;HRun=0;HaplotypeScore=98.1269;InbreedingCoeff=0.4455;MQ=77.02;MQ0=0;MQRankSum=-2.564;QD=12.63;ReadPosRankSum=9.921;VQSLOD=4.0922;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:78.26:0,78,1090	1/1:11,0:11:4.14:85,4,0	0/0:20,0:20:57.15:0,57,733	0/0:13,0:13:36.06:0,36,455	0/1:42,0:42:88.29:246,0,88	1/1:24,0:24:35.23:213,35,0	0/1:15,0:15:3.88:64,0,4	0/0:48,0:48:99:0,141,1902	1/1:26,0:26:6.39:182,6,0	0/1:36,0:36:28.10:188,0,28	1/1:20,0:20:5.99:143,6,0	1/1:0,15:15:39.13:594,39,0	1/1:0,18:18:48.16:733,48,0	1/1:0,21:21:51.10:750,51,0	0/1:22,0:22:1.44:125,0,1	1/1:20,0:20:20.11:137,20,0	1/1:31,0:31:25.83:244,26,0	0/1:20,0:20:25:94,0,25	1/1:14,0:14:0.22:69,0,0	0/1:48,1:49:58.63:379,0,59	1/1:20,0:20:48.53:200,49,0	0/1:31,0:31:8.15:171,0,8	1/1:0,20:20:57.19:870,57,0	1/1:1,12:13:35.79:516,36,0	1/1:26,0:26:62.48:236,62,0	0/0:25,0:25:75.23:0,75,1025	0/0:26,0:25:72.24:0,72,1001	0/0:29,0:29:87.22:0,87,1123
chr10	6405138	.	C	CACAAACAAACAA	11397.71	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-6.897;DP=687;FS=15.338;HRun=0;HaplotypeScore=231.1180;InbreedingCoeff=0.9994;MQ=66.74;MQ0=0;MQRankSum=-13.436;QD=97.42;ReadPosRankSum=-0.423;VQSLOD=3.4054;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,108,3475	0/0:9,0:9:27.09:0,27,916	0/0:21,0:19:42.08:0,42,1008	0/0:20,0:20:37.35:0,37,914	0/0:30,0:30:78.27:0,78,2658	0/0:19,0:19:45.15:0,45,1515	0/0:19,0:19:48.10:0,48,1425	0/0:37,0:37:79.89:0,80,2793	0/0:26,0:26:57.20:0,57,2020	0/0:29,0:29:69.23:0,69,2151	0/0:23,0:23:60.21:0,60,2084	1/1:10,12:22:48.16:2788,48,0	1/1:15,11:29:48.16:2510,48,0	1/1:14,10:26:36.12:2027,36,0	0/0:27,0:27:72.19:0,72,2151	0/0:21,0:21:54.17:0,54,1795	0/0:29,0:29:69.21:0,69,2291	0/0:18,0:18:54.07:0,54,1690	0/0:17,0:17:45.15:0,45,1419	0/0:37,0:37:75.26:0,75,2373	0/0:24,0:24:54.15:0,54,1697	0/0:25,0:25:54.19:0,54,1823	1/1:11,14:26:48.16:2652,48,0	1/1:9,5:14:27.09:1421,27,0	0/0:26,0:24:54.14:0,54,1521	0/0:24,0:24:63.21:0,63,1976	0/0:27,0:27:69.24:0,69,2365	0/0:21,0:21:51.10:0,51,1306
chr10	6406584	.	CT	C	855.63	PASS	AC=10;AF=0.185;AN=54;BaseQRankSum=9.258;DP=449;FS=1.447;HRun=2;HaplotypeScore=105.5880;InbreedingCoeff=0.9460;MQ=81.78;MQ0=2;MQRankSum=-7.879;QD=16.45;ReadPosRankSum=-0.534;VQSLOD=3.4665;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:72.24:0,72,1079	1/1:2,5:7:11.85:104,12,0	0/0:16,0:15:38.68:0,39,495	0/0:26,0:20:50.16:0,50,658	1/1:0,13:13:17.95:163,18,0	0/0:13,0:13:39.13:0,39,584	0/0:19,0:19:57.18:0,57,829	0/0:27,0:27:78.09:0,78,1118	0/0:13,0:13:33.11:0,33,494	1/1:1,14:15:41.97:512,42,0	1/1:6,8:14:20.54:200,21,0	0/0:11,0:11:33.11:0,33,488	0/0:13,0:13:39.09:0,39,552	0/0:16,0:16:39.13:0,39,583	0/0:21,0:21:57.18:0,57,825	0/0:15,0:15:45.10:0,45,624	0/0:17,0:17:48.09:0,48,670	1/1:2,1:3:3.01:39,3,0	0/0:17,0:17:48.16:0,48,720	0/0:13,0:13:36.11:0,36,514	./.	0/0:20,0:20:54.18:0,54,809	0/0:20,0:20:54.18:0,54,809	0/0:13,0:13:23.84:0,24,342	0/0:24,0:23:72.24:0,72,1079	0/0:26,0:26:78.26:0,78,1164	0/0:14,0:14:42.14:0,42,607	0/0:12,0:12:36.12:0,36,540
chr10	6406589	.	AGTTCTTTAT	A	2529.03	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=8.742;DP=428;FS=3.333;HRun=0;HaplotypeScore=149.1601;InbreedingCoeff=0.9134;MQ=78.78;MQ0=2;MQRankSum=-7.346;QD=57.48;ReadPosRankSum=-1.593;VQSLOD=3.4888;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:76.50:0,77,3617	1/1:0,5:5:12.04:318,12,0	0/0:20,0:15:42.14:0,42,1495	0/0:27,0:18:41.76:0,42,1377	1/1:0,13:13:15.05:418,15,0	0/0:14,0:14:42.13:0,42,1837	0/0:17,0:17:51.17:0,51,2328	0/0:26,0:26:78.27:0,78,3566	0/0:14,0:14:42.14:0,42,1972	1/1:0,14:14:42.14:1336,42,0	1/1:1,8:9:24.03:510,24,0	0/0:10,0:10:30.10:0,30,1481	0/0:12,0:12:36.08:0,36,1547	0/0:15,0:15:39.13:0,39,1852	0/0:20,0:20:60.21:0,60,2736	0/0:13,0:13:39.13:0,39,1816	0/0:15,0:15:39.13:0,39,1749	1/1:0,1:1:3.01:97,3,0	0/0:20,0:20:60.21:0,60,2974	0/0:10,0:10:30.10:0,30,1392	1/1:0,2:1:2.97:20,3,0	0/0:20,0:20:60.19:0,60,2832	0/0:22,0:22:66.21:0,66,2668	0/0:9,0:9:18.06:0,18,826	0/0:23,0:22:69.24:0,69,3432	0/0:25,0:25:75.26:0,75,3631	0/0:14,0:14:42.14:0,42,2064	0/0:12,0:12:36.12:0,36,1235
chr10	6407464	.	GAACCACA	G	5815.51	PASS	AB=0.955;AC=13;AF=0.232;AN=56;BaseQRankSum=13.643;DP=598;FS=0.930;HRun=0;HaplotypeScore=145.8431;InbreedingCoeff=0.9022;MQ=85.30;MQ0=0;MQRankSum=-13.331;QD=46.52;ReadPosRankSum=-0.270;VQSLOD=4.8197;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,99,3726	1/1:1,8:9:21.07:534,21,0	0/0:28,0:30:78.27:0,78,2779	0/0:25,0:25:63.47:0,63,2122	1/1:3,15:19:42.14:1057,42,0	0/0:31,0:31:93.32:0,93,3479	0/0:23,0:23:66.21:0,66,2479	0/0:23,0:23:57.20:0,57,2135	0/0:24,0:24:69.24:0,69,2599	1/1:6,18:24:54.19:1385,54,0	1/1:3,19:23:54.19:1357,54,0	0/0:17,0:17:48.16:0,48,1801	0/0:14,0:14:42.14:0,42,1623	0/0:29,0:29:87.30:0,87,3342	0/0:21,0:21:63.22:0,63,2500	0/0:26,0:26:78.27:0,78,2933	0/0:23,0:23:63.22:0,63,2454	1/1:1,12:13:27.09:692,27,0	0/0:18,0:18:51.17:0,51,1883	0/0:27,0:27:75.26:0,75,2908	1/1:3,13:15:33.11:777,33,0	0/0:17,0:17:45.15:0,45,1717	0/0:18,0:18:48.16:0,48,1777	0/0:18,0:18:54.19:0,54,2141	0/0:23,0:23:69.24:0,69,2620	0/1:20,1:21:13.72:14,0,2250	0/0:22,0:22:63.22:0,63,2437	0/0:8,0:8:24.08:0,24,932
chr10	6407584	.	A	AC	5485.28	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=11.497;DP=618;FS=10.099;HRun=1;HaplotypeScore=66.3853;InbreedingCoeff=0.9995;MQ=82.68;MQ0=0;MQRankSum=-3.835;QD=43.88;ReadPosRankSum=2.721;VQSLOD=4.4908;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:78.14:0,78,1003	1/1:0,9:9:27.09:431,27,0	0/0:21,0:21:59.88:0,60,712	0/0:13,0:13:37.66:0,38,454	1/1:1,17:18:50.96:778,51,0	0/0:19,0:19:57.18:0,57,780	0/0:26,0:26:78.24:0,78,1072	0/0:41,0:40:99:0,117,1577	0/0:28,0:28:84.28:0,84,1173	1/1:0,32:32:96.28:1504,96,0	1/1:0,19:19:54.18:863,54,0	0/0:13,0:13:39.13:0,39,545	0/0:16,0:16:48.16:0,48,670	0/0:19,0:19:57.19:0,57,797	0/0:24,0:24:72.22:0,72,988	0/0:23,0:23:69.22:0,69,947	0/0:22,0:22:63.16:0,63,825	1/1:1,23:24:63.21:999,63,0	0/0:25,0:25:75.23:0,75,998	0/0:25,0:25:75.23:0,75,1014	1/1:0,23:23:57.19:909,57,0	0/0:22,0:22:66.20:0,66,897	0/0:15,0:15:44.94:0,45,599	0/0:12,0:12:36.03:0,36,459	0/0:28,0:28:84.27:0,84,1160	0/0:31,0:31:93.27:0,93,1238	0/0:34,0:34:99:0,102,1403	0/0:9,0:9:27.09:0,27,377
chr10	6407821	.	T	TA	4834.03	PASS	AB=1.000;AC=33;AF=0.589;AN=56;BaseQRankSum=-3.683;DP=509;FS=2.186;HRun=10;HaplotypeScore=71.1817;InbreedingCoeff=0.8841;MQ=78.37;MQ0=0;MQRankSum=-1.394;QD=16.73;ReadPosRankSum=0.189;VQSLOD=5.3729;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,1:27:41.96:0,42,540	1/1:2,0:13:19.99:104,20,0	0/0:21,0:21:27.27:0,27,214	0/1:13,0:13:26.03:26,0,35	1/1:5,0:17:31.88:181,32,0	1/1:1,10:11:8.44:295,8,0	1/1:5,14:19:36.06:372,36,0	0/0:26,0:26:56.85:0,57,462	1/1:2,14:16:39.10:416,39,0	1/1:10,0:28:53.63:270,54,0	1/1:3,1:17:34.69:195,35,0	0/0:16,0:16:44.93:0,45,369	0/0:23,0:23:59.93:0,60,493	0/0:14,0:15:37.99:0,38,301	1/1:1,12:13:27.07:288,27,0	1/1:1,14:15:36.09:384,36,0	1/1:1,22:23:63.16:672,63,0	1/1:3,0:21:34.09:171,34,0	1/1:8,11:20:19.94:324,20,0	1/1:4,12:15:30.04:307,30,0	1/1:3,2:12:17.04:86,17,0	1/1:1,11:12:30.08:320,30,0	0/0:18,0:18:41.93:0,42,345	0/0:18,0:18:38.91:0,39,320	1/1:5,17:22:20.47:423,20,0	0/0:27,0:29:43.08:0,43,511	0/0:21,0:22:64.97:0,65,523	0/0:4,0:4:1.99:0,2,42
chr10	6411719	.	CTGTT	C	615.74	PASS	AB=0.931;AC=9;AF=0.161;AN=56;BaseQRankSum=7.953;DP=663;FS=0.687;HRun=0;HaplotypeScore=135.5540;InbreedingCoeff=0.5228;MQ=72.88;MQ0=0;MQRankSum=-8.287;QD=6.48;ReadPosRankSum=-3.139;VQSLOD=2.1259;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,160,4251	0/0:13,0:13:39.13:0,39,999	0/0:17,0:17:48.15:0,48,1032	0/1:6,0:6:18.76:19,0,205	0/0:32,0:32:96.33:0,96,2587	0/0:21,0:21:63.22:0,63,1701	0/0:18,0:18:54.19:0,54,1458	0/0:32,0:32:96.33:0,96,2565	0/0:32,0:32:90.31:0,90,2419	0/0:20,0:20:54.19:0,54,1459	0/0:21,0:21:60.21:0,60,1620	1/1:10,7:17:4.71:206,5,0	0/1:14,2:16:7.84:102,0,8	0/1:17,2:19:9.31:53,0,9	0/0:29,0:29:84.29:0,84,2268	0/0:24,0:24:66.23:0,66,1772	0/0:28,0:28:75.26:0,75,1966	0/0:24,0:24:72.25:0,72,1944	0/0:24,0:24:66.23:0,66,1781	0/0:25,0:25:75.26:0,75,2025	0/0:24,0:24:69.24:0,69,1856	0/0:35,0:35:99:0,105,2811	1/1:20,4:24:26.12:302,26,0	1/1:11,2:13:0.83:75,1,0	0/0:29,0:29:78.25:0,78,2048	0/0:25,0:25:72.25:0,72,1917	0/0:28,0:26:81.28:0,81,2171	0/0:12,0:12:36.12:0,36,972
chr10	6411722	.	T	TAA	2939.31	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=13.967;DP=664;FS=0.930;HRun=0;HaplotypeScore=101.6199;InbreedingCoeff=0.9934;MQ=73.58;MQ0=0;MQRankSum=-13.970;QD=33.79;ReadPosRankSum=1.469;VQSLOD=5.5773;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,160,2592	0/0:13,0:13:39.12:0,39,614	0/0:18,0:18:48.14:0,48,670	0/0:6,0:6:12.97:0,13,129	0/0:33,0:33:99:0,99,1581	0/0:21,0:21:63.22:0,63,1028	0/0:20,0:20:60.20:0,60,973	0/0:36,0:36:99:0,102,1662	0/0:32,0:32:96.31:0,96,1535	0/0:20,0:20:57.19:0,57,909	0/0:21,0:21:63.20:0,63,1003	1/1:8,9:17:39.13:566,39,0	1/1:3,13:16:46.40:633,46,0	1/1:2,17:19:54.18:758,54,0	0/0:28,0:28:84.29:0,84,1371	0/0:24,0:24:72.22:0,72,1129	0/0:28,0:28:81.25:0,81,1273	0/0:25,0:25:75.23:0,75,1197	0/0:24,0:24:72.25:0,72,1168	0/0:26,0:26:78.27:0,78,1270	0/0:23,0:23:69.24:0,69,1126	0/0:36,0:36:99:0,108,1711	1/1:4,20:24:66.15:871,66,0	1/1:2,9:11:22.62:286,23,0	0/0:26,0:26:78.24:0,78,1247	0/0:25,0:25:75.24:0,75,1198	0/0:27,0:25:81.28:0,81,1299	0/0:12,0:12:36.12:0,36,587
chr10	6411723	.	T	TA	1941.23	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=14.132;DP=665;FS=0.918;HRun=0;HaplotypeScore=91.1138;InbreedingCoeff=0.9940;MQ=73.56;MQ0=0;MQRankSum=-13.916;QD=22.31;ReadPosRankSum=1.141;VQSLOD=4.5846;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,160,2207	0/0:12,0:12:36.12:0,36,504	0/0:18,0:18:45.07:0,45,567	0/0:6,0:6:13.28:0,13,146	0/0:33,0:33:99:0,99,1365	0/0:21,0:21:63.21:0,63,881	0/0:20,0:20:60.20:0,60,838	0/0:36,0:36:99:0,108,1465	0/0:32,0:32:96.31:0,96,1321	0/0:20,0:20:57.19:0,57,784	0/0:21,0:21:63.18:0,63,861	1/1:7,9:16:38.99:371,39,0	1/1:3,13:16:47.99:448,48,0	1/1:3,17:20:54.08:519,54,0	0/0:28,0:28:84.28:0,84,1175	0/0:24,0:24:72.23:0,72,977	0/0:28,0:28:81.24:0,81,1079	0/0:25,0:25:75.23:0,75,1030	0/0:25,0:25:72.24:0,72,1006	0/0:27,0:27:78.26:0,78,1089	0/0:23,0:23:69.23:0,69,964	0/0:36,0:36:99:0,108,1468	1/1:4,20:24:64.19:575,64,0	1/1:2,9:11:23.72:204,24,0	0/0:25,0:25:75.25:0,75,1049	0/0:25,0:25:75.23:0,75,1018	0/0:28,0:26:81.27:0,81,1130	0/0:12,0:12:36.12:0,36,503
chr10	6412389	.	A	AT	1879.41	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-2.316;DP=517;FS=2.434;HRun=2;HaplotypeScore=65.9330;InbreedingCoeff=0.9665;MQ=65.65;MQ0=1;MQRankSum=-1.936;QD=30.31;ReadPosRankSum=1.185;VQSLOD=3.3265;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:58.71:0,59,702	0/0:4,0:4:5.34:0,5,18	0/0:18,0:13:35.67:0,36,289	0/0:17,0:13:21.12:0,21,147	0/0:32,0:32:59.69:0,60,280	0/0:17,0:17:51.15:0,51,617	0/0:16,0:16:36.52:0,37,417	0/0:28,0:28:67.11:0,67,775	0/0:11,0:11:30.04:0,30,320	0/0:22,0:22:49.41:0,49,235	0/0:24,0:24:50.63:0,51,281	1/1:1,7:8:18.06:257,18,0	1/1:1,8:9:19.07:285,19,0	1/1:4,11:15:40.05:513,40,0	0/0:11,0:11:33.08:0,33,382	0/0:16,0:16:31.46:0,31,397	0/0:27,0:27:75.10:0,75,814	0/0:27,0:27:49.67:0,50,247	0/0:25,0:25:67.51:0,68,742	0/0:36,0:36:96.41:0,96,1063	0/0:9,0:9:20.35:0,20,134	0/0:14,0:14:39.03:0,39,434	1/1:0,18:18:47.48:613,47,0	1/1:1,11:12:27.09:385,27,0	0/0:24,0:24:68.96:0,69,723	0/0:19,0:19:53.47:0,53,568	0/0:25,0:25:72.07:0,72,776	0/0:7,0:7:21.02:0,21,210
chr10	6412391	.	T	TTAA	1163.01	PASS	AB=0.648;AC=16;AF=0.286;AN=56;BaseQRankSum=13.054;DP=532;FS=1.698;HRun=0;HaplotypeScore=92.9558;InbreedingCoeff=0.4556;MQ=65.54;MQ0=1;MQRankSum=-2.671;QD=6.19;ReadPosRankSum=3.451;VQSLOD=2.4563;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:27:77.73:0,78,1058	1/1:0,1:5:8.64:57,9,0	0/0:19,0:15:38.60:0,39,350	0/0:16,0:12:27.91:0,28,216	0/1:8,0:35:47.59:188,0,48	0/0:17,0:17:51.17:0,51,893	0/0:15,0:15:44.84:0,45,644	0/0:25,0:27:75.04:0,75,1183	0/0:11,0:11:33.03:0,33,446	0/1:3,0:22:2.13:105,0,2	0/1:7,0:25:99:149,0,99	0/1:8,0:8:7.22:70,0,7	1/1:9,0:9:6.73:79,7,0	1/1:17,0:17:18.23:224,18,0	0/0:10,0:11:33.10:0,33,546	0/0:15,0:17:44.94:0,45,647	0/0:26,0:28:81.13:0,81,1192	0/1:6,0:27:23.04:91,0,23	0/0:24,0:25:72.11:0,72,1060	0/0:35,0:37:99:0,108,1567	0/1:4,0:9:15.51:16,0,75	0/0:14,0:15:38.98:0,39,634	1/1:19,0:19:45.29:252,45,0	1/1:12,0:12:1.34:108,1,0	0/0:24,0:24:68.95:0,69,990	0/0:19,0:21:47.16:0,47,820	0/0:24,0:26:75.08:0,75,1112	0/0:7,0:7:21.02:0,21,262
chr10	6412580	.	G	GGCTCCACTTTGT	9324.79	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-3.176;DP=701;FS=96.357;HRun=0;HaplotypeScore=243.5155;InbreedingCoeff=0.9984;MQ=72.09;MQ0=0;MQRankSum=-11.201;QD=121.10;ReadPosRankSum=0.247;VQSLOD=1.7931;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:60,0:60:99:0,168,5345	0/0:13,0:13:36.11:0,36,1220	0/0:19,0:19:44.56:0,45,1197	0/0:17,0:17:42.08:0,42,866	0/0:26,0:26:68.87:0,69,2016	0/0:29,0:28:75.15:0,75,2263	0/0:25,0:25:72.18:0,72,2352	0/0:26,0:26:66.19:0,66,1956	0/0:29,0:29:78.27:0,78,2923	0/0:32,0:32:78.17:0,78,2545	0/0:24,0:24:69.23:0,69,2506	1/1:7,3:10:21:990,21,0	1/1:2,8:10:27.09:1645,27,0	1/1:6,15:31:63.16:3437,63,0	0/0:32,0:32:93.32:0,93,3282	0/0:31,0:31:93.28:0,93,3342	0/0:34,0:33:99:0,99,3272	0/0:23,0:22:66.14:0,66,2252	0/0:18,0:18:48.15:0,48,1495	0/0:20,0:20:59.86:0,60,1904	0/0:57,0:56:99:0,150,4779	0/0:17,0:17:45.05:0,45,1417	1/1:6,8:14:36.06:1859,36,0	1/1:9,2:11:30.09:1393,30,0	0/0:19,0:19:50.98:0,51,1662	0/0:33,0:33:99:0,99,3153	0/0:31,0:31:93.29:0,93,3288	0/0:9,0:9:27.05:0,27,751
chr10	6412642	.	C	CAT	4697.74	PASS	AB=0.837;AC=20;AF=0.357;AN=56;BaseQRankSum=2.842;DP=888;FS=8.917;HRun=0;HaplotypeScore=250.8401;InbreedingCoeff=-0.5600;MQ=50.51;MQ0=32;MQRankSum=-4.576;QD=8.48;ReadPosRankSum=-7.860;VQSLOD=1.9959;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:71,0:71:99:0,193,2858	0/1:8,1:9:99:133,0,225	0/0:73,0:23:60.63:0,61,795	0/0:80,0:29:56.65:0,57,784	0/1:24,10:33:99:456,0,528	0/1:21,4:24:99:199,0,701	0/1:26,13:39:99:368,0,674	0/0:37,0:35:87.26:0,87,1252	0/1:20,8:28:99:123,0,706	0/1:26,5:27:99:169,0,726	0/1:21,6:27:99:261,0,637	0/1:12,1:12:20.71:21,0,328	0/0:5,0:5:9.03:0,9,136	0/1:17,4:19:99:177,0,269	0/1:24,5:29:99:404,0,724	0/1:26,4:29:99:233,0,748	0/1:26,2:27:99:202,0,595	0/1:18,5:22:99:265,0,490	0/1:33,3:22:99:196,0,441	0/1:24,8:31:99:329,0,828	0/1:56,14:63:99:404,0,792	0/1:13,14:27:99:499,0,303	0/1:19,6:24:99:116,0,416	0/1:5,2:7:54.97:55,0,79	0/1:17,1:17:87.11:87,0,444	0/0:30,0:29:84.25:0,84,1209	0/0:24,0:23:69.21:0,69,1028	0/0:12,0:11:33.02:0,33,427
chr10	6412662	.	AC	A	3922.56	PASS	AB=0.865;AC=21;AF=0.375;AN=56;BaseQRankSum=9.356;DP=887;FS=5.613;HRun=2;HaplotypeScore=265.2461;InbreedingCoeff=-0.6014;MQ=45.75;MQ0=47;MQRankSum=-10.355;QD=6.88;ReadPosRankSum=-1.059;VQSLOD=0.2046;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:63,1:64:99:0,179,2658	0/1:4,1:5:23.20:23,0,164	0/0:64,1:15:20.71:0,21,374	0/0:70,1:14:38.85:0,39,547	0/1:25,12:35:99:255,0,623	0/1:28,0:27:99:266,0,340	0/1:40,0:40:99:226,0,569	0/0:49,0:40:93.31:0,93,1461	0/1:30,0:30:99:250,0,434	0/1:29,10:33:99:254,0,716	0/1:17,8:25:99:254,0,498	0/1:10,7:16:99:172,0,190	0/1:2,3:5:32.56:86,0,33	0/1:15,8:21:99:188,0,312	0/1:33,0:33:99:279,0,642	0/1:32,0:31:99:257,0,544	0/1:31,1:30:99:128,0,546	0/1:16,6:21:99:138,0,405	0/1:28,0:16:34.65:35,0,355	0/1:33,2:33:99:374,0,621	0/1:50,12:52:99:172,0,860	0/1:27,1:27:64.71:65,0,671	0/1:12,10:23:99:306,0,184	0/1:4,2:6:34.73:60,0,35	0/1:18,0:17:99:135,0,295	0/0:29,2:28:15.22:0,15,1031	0/0:25,0:24:75.23:0,75,1061	0/0:12,0:11:33.11:0,33,494
chr10	6412663	.	C	CA	4311.60	PASS	AB=0.891;AC=21;AF=0.375;AN=56;BaseQRankSum=9.069;DP=877;FS=6.204;HRun=1;HaplotypeScore=262.3492;InbreedingCoeff=-0.6049;MQ=45.99;MQ0=46;MQRankSum=-9.359;QD=7.73;ReadPosRankSum=-1.804;VQSLOD=1.1763;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:63,0:63:99:0,175,2471	0/1:5,0:5:7.34:7,0,151	0/0:65,0:15:3.95:0,4,335	0/0:73,0:14:38.85:0,39,511	0/1:37,0:35:99:200,0,593	0/1:17,12:27:99:486,0,308	0/1:31,8:39:99:384,0,531	0/0:50,0:42:99:0,102,1390	0/1:19,9:29:99:395,0,405	0/1:39,0:33:76.38:76,0,666	0/1:24,0:24:99:138,0,486	0/1:16,0:15:45.45:45,0,176	0/1:5,0:5:18.81:19,0,31	0/1:21,0:19:66.61:67,0,301	0/1:21,12:33:99:473,0,591	0/1:21,9:30:99:361,0,501	0/1:22,8:28:99:246,0,521	0/1:21,0:21:60.51:61,0,386	0/1:23,3:15:99:139,0,334	0/1:22,14:34:99:638,0,563	0/1:61,0:52:72.83:73,0,820	0/1:25,3:27:90.18:90,0,606	0/1:22,0:22:99:154,0,170	0/1:6,0:6:20.30:20,0,34	0/1:10,7:16:99:241,0,240	0/0:31,0:29:34.89:0,35,987	0/0:25,0:24:75.23:0,75,1005	0/0:12,0:11:33.11:0,33,460
chr10	6412668	.	TAC	T	45.95	PASS	AB=0.994;AC=11;AF=0.196;AN=56;BaseQRankSum=9.729;DP=889;FS=0.912;HRun=0;HaplotypeScore=299.7408;InbreedingCoeff=-0.0686;MQ=44.81;MQ0=47;MQRankSum=-10.961;QD=0.22;ReadPosRankSum=3.971;VQSLOD=1.7398;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:62,0:62:99:0,152,2407	0/1:5,0:5:14.38:14,0,38	0/0:61,0:15:8.61:0,9,129	0/0:70,0:16:26.98:0,27,345	0/0:35,0:33:11.15:0,11,155	0/0:28,1:27:4.96:0,5,439	0/1:40,1:40:11.39:11,0,568	0/0:51,0:43:98.14:0,98,1590	0/1:31,0:31:9.88:10,0,583	0/0:37,0:32:1.89:0,2,378	0/0:22,0:22:8.64:0,9,196	0/1:16,0:15:23.05:23,0,126	0/1:5,0:5:24.57:25,0,27	0/1:21,0:19:31.46:31,0,132	0/0:31,0:31:46.87:0,47,921	0/1:34,1:34:25.95:26,0,751	0/0:36,0:34:30.33:0,30,814	0/1:25,0:24:1.54:2,0,155	0/0:29,0:17:29.71:0,30,429	0/0:36,0:34:37.41:0,37,865	0/0:69,0:61:16.62:0,17,287	0/0:29,0:28:10.15:0,10,730	0/1:23,0:23:12.80:13,0,26	1/1:5,1:6:7.36:32,7,0	0/0:20,0:18:7.34:0,7,399	0/0:27,0:25:57.04:0,57,864	0/0:25,1:26:33.92:0,34,996	0/0:10,0:9:24.06:0,24,364
chr10	6412678	.	CACAA	C	1470.25	PASS	AB=0.935;AC=20;AF=0.357;AN=56;BaseQRankSum=11.120;DP=893;FS=19.003;HRun=0;HaplotypeScore=314.9959;InbreedingCoeff=-0.4694;MQ=47.57;MQ0=41;MQRankSum=-9.527;QD=2.49;ReadPosRankSum=-5.295;VQSLOD=0.2635;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:58:99:0,158,3714	0/1:5,1:6:4.52:5,0,74	0/1:62,0:18:1.63:2,0,240	0/0:61,0:13:26.72:0,27,463	0/0:29,6:33:60.07:0,60,350	0/1:28,0:27:99:160,0,849	0/1:36,0:35:59.20:59,0,805	0/0:58,0:49:99:0,124,2611	0/1:36,0:36:99:277,0,946	0/1:36,2:34:99:112,0,466	0/1:18,5:23:13.86:14,0,229	0/1:13,4:15:99:146,0,114	0/1:4,3:7:22.52:133,0,23	0/1:16,4:18:88.10:88,0,182	0/1:29,0:29:22.32:22,0,1431	0/1:34,0:33:99:183,0,1264	0/1:38,0:37:2.56:3,0,1388	0/1:23,3:26:99:163,0,176	0/1:24,0:17:30.30:30,0,714	0/1:36,0:35:15.88:16,0,1389	0/1:73,2:69:29.99:30,0,364	0/1:31,0:31:0.45:0,0,1152	0/0:21,5:26:2.90:0,3,92	0/1:5,1:6:3.92:55,0,4	0/1:19,0:18:99:124,0,610	0/0:26,0:23:66.11:0,66,1398	0/0:27,0:27:75.18:0,75,1726	0/0:10,0:10:30.06:0,30,632
chr10	6412682	.	AAC	A	4211.43	PASS	AB=0.915;AC=23;AF=0.411;AN=56;BaseQRankSum=8.254;DP=885;FS=16.782;HRun=0;HaplotypeScore=277.8496;InbreedingCoeff=0.7266;MQ=47.49;MQ0=37;MQRankSum=-7.295;QD=12.10;ReadPosRankSum=-1.534;VQSLOD=2.6510;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:59,0:59:99:0,149,2506	1/1:2,4:6:8.41:136,8,0	0/0:61,0:14:14.19:0,14,218	0/0:60,1:15:15.56:0,16,230	1/1:19,16:34:59.10:827,59,0	0/0:28,0:27:29.19:0,29,716	0/0:34,0:33:5.27:0,5,491	0/0:56,0:47:99:0,105,1741	0/1:37,0:38:12.32:12,0,773	0/1:25,13:34:24.44:633,0,24	1/1:14,9:23:35.83:483,36,0	1/1:16,0:14:4.27:150,4,0	1/1:7,0:7:13.80:119,14,0	1/1:17,1:16:8.04:226,8,0	0/0:28,0:28:35.86:0,36,1092	0/1:34,0:34:0.76:1,0,873	0/0:37,0:39:73.06:0,73,1238	1/1:14,11:27:12.37:354,12,0	0/0:20,0:15:32.47:0,32,527	0/0:34,0:34:51.58:0,52,1085	1/1:20,47:69:53.08:864,53,0	0/0:32,0:32:22.72:0,23,898	1/1:23,0:24:34.67:345,35,0	1/1:6,0:6:5.97:61,6,0	0/0:19,0:18:14.81:0,15,411	0/0:25,1:23:25.63:0,26,1033	0/0:26,0:26:78.04:0,78,1283	0/0:12,0:12:33.11:0,33,547
chr10	6412701	.	CAAA	C	980.82	PASS	AB=0.865;AC=14;AF=0.250;AN=56;BaseQRankSum=9.142;DP=869;FS=6.809;HRun=3;HaplotypeScore=279.4046;InbreedingCoeff=-0.3268;MQ=49.56;MQ0=18;MQRankSum=-7.957;QD=3.09;ReadPosRankSum=4.547;VQSLOD=-0.5997;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,141,3291	0/1:6,1:7:37.67:38,0,317	0/0:58,0:14:41.59:0,42,637	0/0:52,0:9:21.06:0,21,380	0/0:29,5:34:12.79:0,13,1451	0/0:30,2:34:7.10:0,7,1531	0/0:30,3:32:18.73:0,19,1078	0/0:35,0:32:96.33:0,96,2255	0/1:30,4:38:97.70:98,0,1391	0/1:31,8:39:99:290,0,1511	0/1:20,4:24:41.21:41,0,931	0/1:10,5:13:99:190,0,189	0/1:7,1:8:31.68:32,0,291	0/1:9,5:14:99:235,0,252	0/0:35,2:37:43.47:0,43,1950	0/0:32,2:35:24.21:0,24,1580	0/1:35,3:41:33.01:33,0,2203	0/1:25,2:29:49.90:50,0,1007	0/1:18,1:13:19.75:20,0,599	0/1:31,3:34:17.87:18,0,1763	0/0:65,2:74:99:0,129,2313	0/0:33,2:37:85.03:0,85,1761	0/1:19,1:21:5.85:6,0,495	0/1:6,0:6:5.72:6,0,58	0/1:14,2:17:78.25:78,0,642	0/0:24,0:23:69.23:0,69,1597	0/0:30,0:30:90.31:0,90,2105	0/0:14,0:14:42.14:0,42,1033
chr10	6412703	.	A	AAC	944.18	PASS	AB=0.860;AC=9;AF=0.161;AN=56;BaseQRankSum=7.467;DP=872;FS=6.424;HRun=0;HaplotypeScore=275.0103;InbreedingCoeff=0.5400;MQ=49.87;MQ0=18;MQRankSum=-7.715;QD=7.68;ReadPosRankSum=-3.126;VQSLOD=2.2060;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:49:99:0,117,1438	0/0:6,0:6:14.88:0,15,164	0/1:58,0:13:1.70:2,0,121	0/0:53,0:11:12.28:0,12,122	0/0:36,0:35:63.08:0,63,699	0/0:34,0:34:63.85:0,64,773	0/0:32,0:31:50.13:0,50,584	0/0:36,0:34:60.19:0,60,746	0/0:38,0:38:67.25:0,67,740	0/0:40,0:37:90.81:0,91,904	0/0:25,0:25:41.58:0,42,443	0/1:11,4:13:33.51:130,0,34	1/1:2,6:8:7.12:282,7,0	0/1:11,3:13:30.42:176,0,30	0/0:37,0:37:83.93:0,84,954	0/0:36,0:36:42.87:0,43,775	0/0:41,0:40:99:0,102,1187	0/0:28,0:28:52.09:0,52,550	0/0:20,0:14:26.92:0,27,306	0/0:34,0:34:74.80:0,75,831	0/0:78,0:76:99:0,108,1131	0/0:37,0:37:71.45:0,71,777	1/1:11,10:21:15.90:469,16,0	1/1:4,2:6:2.99:23,3,0	0/0:18,0:18:29.10:0,29,370	0/0:27,0:26:54.17:0,54,675	0/0:30,0:30:75.22:0,75,915	0/0:14,0:14:42.13:0,42,524
chr10	6412749	.	TAC	T	266.43	PASS	AB=0.769;AC=8;AF=0.143;AN=56;BaseQRankSum=5.704;DP=768;FS=12.182;HRun=0;HaplotypeScore=175.9318;InbreedingCoeff=0.5343;MQ=49.01;MQ0=25;MQRankSum=-3.245;QD=7.01;ReadPosRankSum=-3.114;VQSLOD=1.9551;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:96.29:0,96,1539	0/0:8,0:8:21.07:0,21,335	0/0:49,2:7:14.12:0,14,137	0/0:55,0:12:24.62:0,25,331	0/0:23,0:23:60.19:0,60,939	0/0:26,0:25:66.22:0,66,1084	0/0:31,0:28:75.24:0,75,1135	0/0:44,0:39:77.93:0,78,1176	0/0:26,0:26:64.77:0,65,1011	0/0:39,0:38:87.21:0,87,1334	0/0:20,0:20:43.39:0,43,732	1/1:6,1:7:3.01:38,3,0	0/1:7,1:8:27.50:28,0,29	1/1:6,2:7:6.02:76,6,0	0/0:22,0:22:54.17:0,54,864	0/0:28,0:27:57.19:0,57,912	0/0:45,0:44:96.21:0,96,1419	0/0:31,0:30:68.39:0,68,1012	0/0:15,0:9:24.08:0,24,374	0/0:31,0:31:55.74:0,56,900	0/0:80,0:78:99:0,111,1661	0/0:26,0:26:58.55:0,59,987	0/1:6,7:13:33.37:204,0,33	1/1:1,1:2:3.01:50,3,0	0/0:16,0:16:27.83:0,28,632	0/0:26,0:26:63.20:0,63,1005	0/0:25,0:25:63.09:0,63,988	0/0:18,0:18:39.13:0,39,646
chr10	6412759	.	C	CT	113.68	PASS	AB=0.767;AC=4;AF=0.071;AN=56;BaseQRankSum=4.832;DP=721;FS=17.130;HRun=0;HaplotypeScore=158.2202;InbreedingCoeff=-0.0090;MQ=51.18;MQ0=23;MQRankSum=-2.679;QD=3.44;ReadPosRankSum=-2.873;VQSLOD=1.4437;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,102,1424	0/0:9,0:9:24.08:0,24,335	0/0:50,1:9:19.31:0,19,232	0/0:51,0:18:38.71:0,39,575	0/0:24,0:24:63.21:0,63,878	0/0:25,0:24:66.22:0,66,922	0/0:36,0:33:82.30:0,82,1166	0/0:39,0:34:84.74:0,85,1159	0/0:25,0:25:68.55:0,69,907	0/0:37,0:37:99:0,102,1409	0/0:19,0:19:45.15:0,45,629	0/1:2,1:3:7.72:14,0,8	0/1:4,5:9:36.41:172,0,36	0/0:4,0:3:5.39:0,5,23	0/0:18,0:18:54.18:0,54,755	0/0:25,0:24:63.17:0,63,857	0/0:39,0:38:99:0,99,1355	0/0:29,0:28:69.23:0,69,969	0/0:16,0:9:24.08:0,24,335	0/0:26,0:26:47.64:0,48,746	0/0:71,0:69:99:0,126,1751	0/0:24,0:24:69.23:0,69,962	0/1:13,3:16:9.86:10,0,274	0/1:4,1:5:22.69:23,0,35	0/0:17,0:17:43.70:0,44,591	0/0:26,0:26:78.24:0,78,1066	0/0:22,0:22:63.01:0,63,880	0/0:17,0:17:39.13:0,39,545
chr10	6412799	.	AACAC	A	1007.78	PASS	AB=0.621;AC=14;AF=0.269;AN=52;BaseQRankSum=-0.170;DP=531;FS=21.414;HRun=0;HaplotypeScore=141.6118;InbreedingCoeff=0.6048;MQ=45.10;MQ0=17;MQRankSum=-3.083;QD=6.90;ReadPosRankSum=-2.204;VQSLOD=1.0374;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:32:29.74:0,30,528	0/1:4,3:9:3.76:202,0,4	./.	./.	1/1:16,10:26:29.12:240,29,0	0/0:13,0:20:4.44:0,4,110	0/0:27,0:24:6.32:0,6,36	0/0:36,0:33:26.74:0,27,306	0/0:8,0:10:6.02:0,6,104	1/1:24,3:29:24.06:307,24,0	1/1:11,4:17:4.37:148,4,0	0/0:2,0:4:8.23:0,8,37	0/1:2,1:6:6.03:6,0,34	1/1:5,1:4:3.01:48,3,0	0/0:10,0:11:8.66:0,9,100	0/0:13,0:16:15.94:0,16,264	0/0:16,0:17:11.96:0,12,173	1/1:13,0:13:9:117,9,0	0/0:9,0:7:6.02:0,6,100	0/0:17,0:17:11.07:0,11,161	1/1:37,1:37:1.76:99,2,0	0/0:16,0:19:25.76:0,26,251	0/0:12,0:17:18.28:0,18,84	0/0:3,0:9:8.23:0,8,37	0/0:16,0:15:11.92:0,12,102	0/0:13,0:19:27.56:0,28,484	0/0:10,0:14:23.95:0,24,372	0/0:5,0:10:15.05:0,15,272
chr10	6412842	.	A	AT	1876.06	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=-0.301;DP=510;FS=10.498;HRun=9;HaplotypeScore=104.4766;InbreedingCoeff=0.8590;MQ=52.29;MQ0=14;MQRankSum=-1.469;QD=14.89;ReadPosRankSum=-1.272;VQSLOD=2.4325;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:43.01:0,43,497	1/1:4,6:10:18.05:196,18,0	0/0:25,0:8:6.02:0,6,89	0/1:22,0:8:8:8,0,45	1/1:8,19:26:33.39:522,33,0	0/0:17,0:16:19.81:0,20,205	0/0:21,0:20:40.94:0,41,293	0/0:35,1:33:80.28:0,80,666	0/0:12,0:12:14.92:0,15,115	1/1:6,18:24:41.91:432,42,0	1/1:1,13:14:27.06:277,27,0	0/0:0,0:10:16.62:0,17,47	0/0:5,0:13:19.39:0,19,56	0/0:0,0:10:18.75:0,19,53	0/0:18,0:18:27.98:0,28,220	0/0:20,0:20:22.65:0,23,163	0/0:25,0:25:53.52:0,54,394	1/1:1,13:14:36.07:387,36,0	0/0:22,0:18:32.73:0,33,263	0/0:7,0:7:11.86:0,12,87	1/1:12,2:13:24.01:241,24,0	0/0:15,0:15:29.57:0,30,241	0/0:4,0:17:22.69:0,23,65	0/0:6,0:20:7.43:0,7,50	0/0:15,0:14:18.46:0,18,159	0/0:23,0:23:50.93:0,51,442	0/0:18,0:18:22.25:0,22,318	0/0:6,0:6:17.97:0,18,149
chr10	6412852	.	C	CTT	2321.02	PASS	AB=0.789;AC=19;AF=0.339;AN=56;BaseQRankSum=-4.473;DP=492;FS=3.885;HRun=11;HaplotypeScore=97.4250;InbreedingCoeff=0.6035;MQ=52.90;MQ0=7;MQRankSum=-0.387;QD=12.03;ReadPosRankSum=-1.336;VQSLOD=2.0363;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:27:31.24:0,31,441	0/1:6,0:7:5.99:6,0,39	0/1:23,0:8:5.05:5,0,48	0/0:15,0:7:1.73:0,2,5	0/0:30,0:29:32.32:0,32,290	1/1:15,2:16:23.69:273,24,0	0/1:9,9:18:44.32:306,0,44	0/0:33,0:32:49.50:0,49,447	1/1:3,5:9:8.52:95,9,0	0/0:25,0:24:20.38:0,20,219	0/0:14,0:14:14.84:0,15,133	0/0:12,0:12:23.93:0,24,224	0/0:13,0:13:26.94:0,27,258	0/0:11,0:12:26.59:0,27,224	1/1:8,9:18:24.89:303,25,0	0/1:7,11:19:5.20:154,0,5	1/1:4,21:27:41.62:559,42,0	0/0:15,0:15:38.86:0,39,323	1/1:11,2:13:20.50:223,21,0	1/1:5,2:8:14.20:144,14,0	0/0:8,0:7:5.76:0,6,48	0/1:12,4:16:10.20:171,0,10	0/0:18,0:16:29.97:0,30,281	0/0:22,0:22:32.26:0,32,314	1/1:6,10:14:20.94:275,21,0	0/0:21,0:23:41.31:0,41,371	0/0:20,0:20:21.42:0,21,260	0/0:7,0:7:14.98:0,15,140
chr10	6413164	.	GAAA	G	5002.60	PASS	AB=0.733;AC=29;AF=0.518;AN=56;BaseQRankSum=6.179;DP=515;FS=5.550;HRun=13;HaplotypeScore=135.6572;InbreedingCoeff=0.9101;MQ=72.83;MQ0=4;MQRankSum=-5.981;QD=20.42;ReadPosRankSum=4.728;VQSLOD=3.1575;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:53:99:0,143,2342	0/0:2,0:5:11.96:0,12,93	0/0:27,0:18:5.88:0,6,128	0/0:30,0:19:14.71:0,15,178	0/0:8,0:21:44:0,44,302	1/1:9,6:15:31.54:395,32,0	1/1:13,5:19:13.42:338,13,0	0/0:18,0:22:52.09:0,52,775	1/1:8,7:16:20.24:304,20,0	0/0:5,0:18:38.33:0,38,309	0/0:3,0:15:33.83:0,34,229	1/1:1,11:12:27.07:328,27,0	1/1:7,13:20:41.63:462,42,0	1/1:2,16:18:36.09:438,36,0	1/1:16,3:19:34.12:352,34,0	1/1:14,5:19:38.97:408,39,0	0/1:7,3:11:4.89:182,0,5	0/0:3,0:22:52.63:0,53,366	1/1:7,0:7:14.69:115,15,0	1/1:8,2:10:17.66:161,18,0	0/0:0,0:8:11.95:0,12,91	1/1:10,7:17:29.77:301,30,0	1/1:3,14:16:26.87:306,27,0	1/1:2,23:25:48.10:568,48,0	1/1:12,7:19:25.69:345,26,0	0/0:22,0:23:51.13:0,51,796	0/0:15,0:19:57.11:0,57,896	0/0:4,0:5:15.03:0,15,254
chr10	6413174	.	A	AG	2918.99	PASS	AB=0.981;AC=27;AF=0.482;AN=56;BaseQRankSum=6.855;DP=495;FS=14.134;HRun=0;HaplotypeScore=123.9879;InbreedingCoeff=0.7419;MQ=64.94;MQ0=5;MQRankSum=-5.339;QD=12.97;ReadPosRankSum=6.363;VQSLOD=3.4912;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,151,1739	0/0:5,0:5:14.86:0,15,104	0/0:28,0:16:35.44:0,35,246	0/0:28,0:16:26.20:0,26,203	0/0:20,0:20:52.19:0,52,350	1/1:7,8:15:30.24:323,30,0	1/1:9,10:19:3.04:323,3,0	0/0:25,0:25:65.77:0,66,667	1/1:8,6:14:21.30:200,21,0	0/0:16,0:16:44.48:0,44,320	0/0:14,0:14:37.55:0,38,241	0/1:13,0:13:24.09:42,0,24	1/1:13,4:17:26.79:217,27,0	0/1:19,0:19:25.04:55,0,25	1/1:3,11:14:31.20:288,31,0	1/1:5,11:16:35.22:364,35,0	1/1:5,5:10:10.33:149,10,0	0/0:23,0:23:58.09:0,58,390	1/1:1,5:6:14.99:190,15,0	1/1:3,7:10:16.80:197,17,0	0/0:8,0:8:11.87:0,12,80	1/1:7,6:13:24.14:210,24,0	0/1:16,1:16:67.98:68,0,68	1/1:24,0:24:39.48:181,39,0	1/1:8,10:17:27.33:328,27,0	0/0:25,0:25:75.03:0,75,802	0/0:21,0:21:59.61:0,60,662	0/0:5,0:5:15.01:0,15,187
chr10	6413189	.	AGAACGAAC	A	5359.28	PASS	AB=0.810;AC=19;AF=0.339;AN=56;BaseQRankSum=8.360;DP=491;FS=0.399;HRun=0;HaplotypeScore=184.8321;InbreedingCoeff=0.9069;MQ=59.09;MQ0=6;MQRankSum=-12.302;QD=38.28;ReadPosRankSum=-2.599;VQSLOD=4.1436;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,126,4097	0/0:5,0:5:15.02:0,15,416	0/0:32,0:16:31.69:0,32,421	0/0:32,0:20:12.22:0,12,644	0/0:16,0:16:38.76:0,39,886	1/1:12,6:18:47.97:757,48,0	0/1:13,4:17:17.47:535,0,17	0/0:26,0:27:52.35:0,52,1204	1/1:9,8:17:48.08:815,48,0	0/0:14,0:14:39.13:0,39,1204	0/0:10,0:10:24.05:0,24,694	0/0:15,0:15:42.11:0,42,1142	0/0:15,0:15:36.12:0,36,997	0/0:19,0:19:45.11:0,45,1329	1/1:9,3:12:27.06:466,27,0	1/1:11,5:16:41.89:682,42,0	1/1:8,4:12:29.23:344,29,0	0/0:22,0:22:54.08:0,54,1375	1/1:6,0:6:17.98:198,18,0	1/1:8,2:10:14.81:209,15,0	0/0:7,0:7:15.01:0,15,403	1/1:6,7:13:39.03:646,39,0	0/0:16,0:15:39.03:0,39,1110	0/0:26,0:26:48.13:0,48,1188	1/1:11,8:18:50.72:707,51,0	0/0:21,0:21:45.08:0,45,1296	0/0:19,0:19:45.10:0,45,1602	0/0:6,0:6:18.01:0,18,318
chr10	6413251	.	GGTGTGTGTGTGT	G	771.96	PASS	AC=8;AF=0.148;AN=54;BaseQRankSum=4.141;DP=492;FS=4.191;HRun=0;HaplotypeScore=177.7068;InbreedingCoeff=0.7328;MQ=64.69;MQ0=9;MQRankSum=-2.327;QD=14.04;ReadPosRankSum=1.295;VQSLOD=2.7360;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:60.19:0,60,2609	0/0:4,0:4:2.74:0,3,12	./.	0/0:37,0:20:2.22:0,2,7	1/1:13,0:14:7.26:138,7,0	0/0:16,0:16:24.08:0,24,1224	0/0:27,0:26:39.07:0,39,1690	0/0:30,0:28:24.08:0,24,889	0/0:20,0:20:27.09:0,27,1128	1/1:10,6:16:19.60:493,20,0	1/1:8,2:10:3.01:103,3,0	0/0:19,0:21:33.10:0,33,1379	0/0:6,0:8:9.01:0,9,328	0/0:18,0:19:33.11:0,33,1629	0/0:15,0:17:36.12:0,36,1737	0/0:14,0:14:15.05:0,15,781	0/0:15,0:16:28.91:0,29,1146	1/1:13,2:14:9.02:175,9,0	0/0:15,0:14:15.30:0,15,454	0/0:9,0:9:9.03:0,9,296	0/0:15,0:15:3.01:0,3,61	0/0:19,0:19:30.10:0,30,1256	0/0:10,0:10:18.06:0,18,717	0/0:17,0:19:30.10:0,30,1316	0/0:14,0:13:15.05:0,15,666	0/0:27,0:27:51.17:0,51,2273	0/0:12,0:12:18.06:0,18,856	0/0:7,0:6:12.93:0,13,428
chr10	6414185	.	T	TCA	9612.88	PASS	AB=0.849;AC=48;AF=0.857;AN=56;BaseQRankSum=-0.148;DP=648;FS=1.756;HRun=0;HaplotypeScore=126.1584;InbreedingCoeff=0.5367;MQ=60.29;MQ0=5;MQRankSum=-0.230;QD=16.55;ReadPosRankSum=0.921;VQSLOD=4.7344;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:21.40:0,21,447	1/1:3,0:6:9:79,9,0	0/0:20,0:9:2.96:0,3,20	0/0:17,1:5:3.01:0,3,34	1/1:13,1:24:18:160,18,0	1/1:16,31:47:69.23:1066,69,0	1/1:11,13:25:30.57:464,31,0	0/1:32,7:39:68.52:303,0,69	1/1:1,16:17:39.13:602,39,0	1/1:13,0:25:42.01:400,42,0	1/1:4,0:17:35.99:315,36,0	1/1:13,0:23:23.99:209,24,0	1/1:12,0:19:29.62:229,30,0	1/1:6,0:18:20.95:175,21,0	1/1:8,15:24:13.85:657,14,0	1/1:8,20:27:34.21:889,34,0	1/1:11,21:34:55.17:826,55,0	1/1:9,0:17:24:210,24,0	0/1:14,3:17:19.31:146,0,19	1/1:11,18:30:39.13:593,39,0	1/1:11,1:22:15:133,15,0	1/1:5,21:27:39.13:602,39,0	1/1:16,0:20:11.97:99,12,0	1/1:13,0:17:14.73:113,15,0	1/1:11,17:28:36.12:556,36,0	1/1:16,0:26:36.48:393,36,0	1/1:12,0:23:35.99:312,36,0	1/1:3,0:5:9:78,9,0
chr10	6415250	.	C	CTT	16607.40	PASS	AB=0.906;AC=43;AF=0.768;AN=56;BaseQRankSum=12.606;DP=582;FS=0.000;HRun=4;HaplotypeScore=122.5517;InbreedingCoeff=0.9006;MQ=81.86;MQ0=1;MQRankSum=-4.818;QD=38.89;ReadPosRankSum=3.711;VQSLOD=3.6908;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:75.21:0,75,967	1/1:1,7:9:21.02:340,21,0	0/0:22,0:21:37.99:0,38,449	0/0:34,0:29:45.10:0,45,687	1/1:3,15:18:42.14:749,42,0	1/1:3,16:21:48.16:857,48,0	1/1:0,13:13:39.13:692,39,0	0/0:29,0:29:72.21:0,72,931	1/1:1,19:20:57.11:951,57,0	1/1:2,19:21:57.14:953,57,0	1/1:4,13:17:33.07:554,33,0	1/1:1,16:17:42.14:751,42,0	1/1:3,16:19:45.15:804,45,0	1/1:1,11:12:30.10:537,30,0	1/1:2,19:21:48.16:857,48,0	1/1:0,19:20:51.17:903,51,0	1/1:2,25:27:63.16:1058,63,0	1/1:3,24:27:63.18:1090,63,0	1/1:7,20:27:60.18:984,60,0	1/1:4,16:20:48.05:759,48,0	1/1:2,10:12:30.10:536,30,0	1/1:1,20:21:54.09:896,54,0	1/1:2,18:20:51.13:875,51,0	1/1:1,16:17:45.15:803,45,0	1/1:3,16:19:36.12:642,36,0	0/1:26,3:29:17.46:17,0,902	0/0:26,0:26:75.22:0,75,969	0/0:17,0:17:36.11:0,36,480
chr10	6416586	.	G	GA	3554.02	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-0.742;DP=589;FS=8.029;HRun=4;HaplotypeScore=89.8297;InbreedingCoeff=0.9995;MQ=89.72;MQ0=0;MQRankSum=-2.086;QD=33.85;ReadPosRankSum=1.716;VQSLOD=3.9012;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:66.19:0,66,748	1/1:1,14:15:36.12:492,36,0	0/0:26,0:26:54.15:0,54,606	0/0:19,0:19:45.12:0,45,504	1/1:0,18:18:54.18:737,54,0	0/0:22,0:22:63.16:0,63,702	0/0:19,0:19:54.11:0,54,585	0/0:44,0:44:99:0,120,1353	0/0:16,0:16:42.12:0,42,473	1/1:2,17:19:51.16:678,51,0	1/1:2,11:13:36.03:449,36,0	0/0:24,0:24:69.20:0,69,782	0/0:18,0:18:48.14:0,48,542	0/0:11,0:11:33.08:0,33,361	0/0:33,0:33:96.25:0,96,1074	0/0:25,0:25:66.17:0,66,739	0/0:24,0:24:51.14:0,51,577	1/1:3,24:27:29.91:787,30,0	0/0:18,0:18:48.14:0,48,544	0/0:20,0:20:57.16:0,57,646	1/1:1,12:13:30.10:410,30,0	0/0:12,0:12:30.08:0,30,339	0/0:22,0:22:47.77:0,48,538	0/0:15,0:15:39.09:0,39,433	0/0:23,0:23:69.18:0,69,773	0/0:24,0:24:72.21:0,72,816	0/0:33,0:33:99:0,99,1121	0/0:14,0:14:39.11:0,39,442
chr10	6416950	.	TATACACAC	T	4562.47	PASS	AB=0.941;AC=36;AF=0.643;AN=56;BaseQRankSum=3.986;DP=491;FS=4.911;HRun=0;HaplotypeScore=125.9857;InbreedingCoeff=0.6610;MQ=66.12;MQ0=10;MQRankSum=-1.671;QD=14.13;ReadPosRankSum=3.667;VQSLOD=3.3537;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:45.01:0,45,881	0/0:1,0:7:2.62:0,3,11	0/0:23,0:16:8.35:0,8,294	0/0:21,0:15:32.51:0,33,338	1/1:1,0:15:2.95:31,3,0	1/1:15,0:18:44.97:521,45,0	1/1:1,18:19:9.03:236,9,0	0/0:22,0:22:60:0,60,570	1/1:6,0:6:17.96:144,18,0	1/1:17,0:17:25.13:281,25,0	0/0:0,0:19:5.68:0,6,39	1/1:0,20:20:2.74:86,3,0	1/1:8,0:7:20.98:210,21,0	1/1:0,16:16:12.04:293,12,0	1/1:0,17:18:8.41:239,8,0	1/1:1,8:10:8.39:171,8,0	1/1:3,20:22:11.99:210,12,0	0/1:13,0:15:24.79:115,0,25	1/1:1,12:13:38.82:463,39,0	1/1:1,18:19:6.02:171,6,0	0/1:30,0:29:10.37:334,0,10	1/1:2,19:20:12.04:290,12,0	1/1:1,0:16:2.92:57,3,0	1/1:19,0:18:35.98:351,36,0	1/1:1,15:17:15.05:359,15,0	0/0:28,0:28:75.94:0,76,1569	0/0:13,0:13:39:0,39,870	0/0:7,0:7:14.76:0,15,519
chr10	6417782	.	C	CT	3859.38	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-10.678;DP=690;FS=0.000;HRun=1;HaplotypeScore=99.3099;InbreedingCoeff=0.9983;MQ=63.78;MQ0=10;MQRankSum=2.848;QD=30.15;ReadPosRankSum=1.996;VQSLOD=3.3879;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:36:99:0,102,1289	0/0:7,0:7:21.07:0,21,272	0/0:21,0:18:44.37:0,44,521	0/0:35,0:31:42.75:0,43,765	0/0:22,0:22:59.80:0,60,758	0/0:18,0:18:48.16:0,48,622	0/0:29,0:27:81.26:0,81,1051	0/0:33,0:32:87.19:0,87,1068	0/0:28,0:28:84.27:0,84,1089	0/0:28,0:26:60.19:0,60,768	0/0:15,0:14:36.12:0,36,467	1/1:2,19:21:45.15:653,45,0	1/1:3,24:25:54.18:808,54,0	1/1:3,17:20:48.08:719,48,0	0/0:23,0:23:69.17:0,69,850	0/0:26,0:26:78.23:0,78,983	0/0:36,0:36:93.29:0,93,1191	0/0:27,0:27:72.18:0,72,900	0/0:18,0:17:51.17:0,51,662	0/0:10,0:10:27.09:0,27,350	0/0:32,0:32:93.19:0,93,1148	0/0:20,0:18:51.17:0,51,659	1/1:3,14:16:24.08:356,24,0	1/1:4,38:38:90.27:1324,90,0	0/0:23,0:23:63.18:0,63,789	0/0:30,0:29:84.26:0,84,1075	0/0:24,0:24:69.22:0,69,895	0/0:18,0:18:51.13:0,51,631
chr10	6417956	.	CT	C	2586.38	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=11.128;DP=634;FS=1.502;HRun=1;HaplotypeScore=80.5698;InbreedingCoeff=0.9939;MQ=76.64;MQ0=0;MQRankSum=-6.164;QD=27.51;ReadPosRankSum=-1.539;VQSLOD=3.1217;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:96.22:0,96,1292	0/0:8,0:8:24.07:0,24,335	0/0:22,0:22:58.84:0,59,655	0/0:18,0:18:44.30:0,44,587	0/0:22,0:22:63.19:0,63,911	0/0:15,0:15:45.14:0,45,652	0/0:29,0:29:84.25:0,84,1211	0/0:23,0:23:66.12:0,66,953	0/0:28,0:28:84.24:0,84,1180	0/0:25,0:25:72.21:0,72,992	0/0:23,0:23:69.08:0,69,909	1/1:5,17:20:60.13:772,60,0	1/1:4,13:14:42:529,42,0	1/1:5,15:20:60.15:755,60,0	0/0:35,0:34:99:0,102,1446	0/0:27,0:27:81.26:0,81,1191	0/0:38,0:37:99:0,105,1434	0/0:21,0:21:60.19:0,60,877	0/0:26,0:26:71.46:0,71,1005	0/0:21,0:21:63.18:0,63,895	0/0:45,0:45:99:0,129,1840	0/0:22,0:22:63.20:0,63,921	1/1:1,7:7:15.04:192,15,0	1/1:5,22:24:38.34:512,38,0	0/0:19,0:19:57.18:0,57,831	0/0:16,0:16:48.14:0,48,671	0/0:16,0:14:45.15:0,45,670	0/0:6,0:6:18.06:0,18,269
chr10	6417967	.	A	AC	2340.19	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=7.669;DP=646;FS=0.000;HRun=5;HaplotypeScore=81.8697;InbreedingCoeff=0.9555;MQ=73.25;MQ0=0;MQRankSum=-8.148;QD=22.94;ReadPosRankSum=-1.390;VQSLOD=2.1528;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:96.21:0,96,1021	0/0:10,0:10:21.02:0,21,215	0/0:17,0:17:36.08:0,36,382	0/0:15,0:15:42.07:0,42,441	0/0:25,0:25:57.12:0,57,603	0/0:17,0:17:39.08:0,39,411	0/0:30,0:30:81.18:0,81,861	0/0:24,0:24:54.13:0,54,574	0/0:24,0:24:60.14:0,60,643	0/0:27,0:27:72.18:0,72,773	0/0:23,0:23:60.03:0,60,611	1/1:2,20:20:48.07:591,48,0	1/1:1,21:19:51.12:651,51,0	1/1:8,17:25:54.15:679,54,0	0/0:32,0:32:93.23:0,93,999	0/0:23,0:23:66.17:0,66,709	0/0:35,0:34:81.20:0,81,871	0/0:23,0:23:66.16:0,66,709	0/0:23,0:23:27.27:0,27,492	0/0:23,0:23:54.11:0,54,571	0/0:46,1:47:92.85:0,93,1347	0/0:21,0:21:51.12:0,51,545	1/1:2,7:8:15.05:197,15,0	1/1:1,23:21:33.49:395,33,0	0/0:23,0:23:63.15:0,63,677	0/0:21,0:21:45.11:0,45,483	0/0:19,0:18:48.12:0,48,516	0/0:4,0:4:3.01:0,3,32
chr10	6418270	.	G	GAC	20253.56	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=-13.819;DP=604;FS=5.746;HRun=0;HaplotypeScore=63.0977;InbreedingCoeff=0.9915;MQ=82.40;MQ0=4;MQRankSum=-5.051;QD=45.31;ReadPosRankSum=4.378;VQSLOD=6.5073;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:87.24:0,87,1189	1/1:1,6:7:18.06:330,18,0	0/0:18,0:18:47.33:0,47,610	0/0:17,0:17:48.15:0,48,659	1/1:1,18:19:45.15:824,45,0	1/1:2,13:15:33.11:605,33,0	1/1:0,24:26:60.21:1091,60,0	0/0:28,0:28:72.23:0,72,1016	1/1:2,23:26:63.22:1153,63,0	1/1:4,12:15:36.12:652,36,0	1/1:1,11:11:33.11:598,33,0	1/1:3,25:28:78.27:1423,78,0	1/1:0,18:19:51.17:934,51,0	1/1:3,28:31:75.26:1374,75,0	1/1:5,27:31:69.24:1245,69,0	1/1:1,26:27:63.22:1154,63,0	1/1:1,25:25:69.24:1264,69,0	1/1:0,26:26:75.26:1374,75,0	1/1:2,17:19:54.17:952,54,0	1/1:0,14:14:42.14:770,42,0	1/1:2,32:35:81.28:1485,81,0	1/1:0,11:10:27.09:495,27,0	1/1:1,11:12:27.09:495,27,0	1/1:2,27:29:78.27:1430,78,0	1/1:1,16:17:33.11:605,33,0	0/0:23,1:24:11.41:0,11,831	0/0:23,0:23:60.17:0,60,824	0/0:12,0:12:33.11:0,33,473
chr10	6418792	.	GTGCA	G	5387.96	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=7.784;DP=698;FS=3.966;HRun=0;HaplotypeScore=193.8069;InbreedingCoeff=0.9506;MQ=48.06;MQ0=19;MQRankSum=-5.221;QD=16.04;ReadPosRankSum=0.793;VQSLOD=4.6760;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:69.06:0,69,1517	1/1:5,0:5:8.94:109,9,0	0/0:41,0:13:26.74:0,27,493	0/0:60,0:32:56.60:0,57,1184	1/1:14,0:14:2.81:25,3,0	1/1:21,3:24:27.73:301,28,0	1/1:23,3:26:33.78:450,34,0	0/0:35,0:33:42.07:0,42,1476	1/1:22,1:22:39.37:338,39,0	1/1:18,0:18:46.36:626,46,0	1/1:14,0:13:7.15:94,7,0	0/0:28,0:25:47.91:0,48,750	0/0:25,0:22:37.66:0,38,578	0/0:36,0:33:28.10:0,28,923	1/1:26,2:28:58.90:533,59,0	1/1:15,4:19:26.44:261,26,0	1/1:24,0:24:48.35:532,48,0	1/1:20,0:19:32.84:439,33,0	1/1:23,0:20:48.42:566,48,0	1/1:16,0:16:23.65:247,24,0	1/1:43,0:36:29.15:340,29,0	1/1:15,0:15:25.37:215,25,0	0/0:15,0:14:18.05:0,18,303	0/0:32,0:30:18.02:0,18,313	1/1:20,4:24:33.26:312,33,0	0/0:27,0:27:81.26:0,81,1711	0/0:23,0:23:66.17:0,66,1398	0/0:7,0:7:18.04:0,18,400
chr10	6418794	.	GCA	G	8221.41	PASS	AB=0.972;AC=33;AF=0.589;AN=56;BaseQRankSum=5.958;DP=677;FS=6.358;HRun=0;HaplotypeScore=163.7778;InbreedingCoeff=0.8770;MQ=47.65;MQ0=19;MQRankSum=-5.765;QD=23.09;ReadPosRankSum=1.628;VQSLOD=5.3875;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,1:33:74.75:0,75,1272	1/1:5,0:5:9.03:132,9,0	0/0:37,0:10:26.74:0,27,431	0/0:59,0:31:55.27:0,55,1036	1/1:6,7:13:2.90:27,3,0	1/1:4,19:23:36.48:512,36,0	1/1:15,11:26:42.12:631,42,0	0/0:34,2:34:31.33:0,31,1349	1/1:2,19:20:42.11:636,42,0	1/1:7,11:18:48.10:630,48,0	1/1:9,4:12:8.91:137,9,0	0/0:27,0:24:48.07:0,48,674	0/0:20,5:22:13.27:0,13,429	0/1:34,1:32:40.17:40,0,673	1/1:9,19:28:69.02:1040,69,0	1/1:7,11:18:30.08:454,30,0	1/1:15,9:24:62.76:874,63,0	1/1:11,6:16:37.54:497,38,0	1/1:9,10:17:51.17:766,51,0	1/1:6,10:16:23.97:375,24,0	1/1:38,4:34:33.08:427,33,0	1/1:6,9:15:29.84:452,30,0	0/0:14,1:14:18.01:0,18,240	0/0:31,1:30:18.03:0,18,288	1/1:11,12:23:41.84:591,42,0	0/0:28,0:28:84.21:0,84,1425	0/0:22,0:22:66.17:0,66,1146	0/0:6,0:6:15.52:0,16,292
chr10	6418796	.	ATG	A	958.40	PASS	AB=0.967;AC=32;AF=0.571;AN=56;BaseQRankSum=9.722;DP=682;FS=0.522;HRun=0;HaplotypeScore=199.2051;InbreedingCoeff=0.3032;MQ=46.83;MQ0=19;MQRankSum=-8.709;QD=2.06;ReadPosRankSum=1.255;VQSLOD=2.6064;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:29,2:31:24.23:24,0,606	0/0:6,0:6:0.27:0,0,1	0/0:34,1:10:8.62:0,9,143	0/0:58,0:30:17.62:0,18,217	0/0:13,0:13:2.22:0,2,8	1/1:23,0:23:27.68:115,28,0	1/1:29,0:28:1.50:16,1,0	0/1:34,3:35:57.42:57,0,583	1/1:21,0:20:36.10:168,36,0	0/1:21,0:21:14.02:14,0,68	0/0:13,0:12:1.25:0,1,4	0/1:30,0:27:1.83:11,0,2	1/1:23,0:20:3.19:45,3,0	0/1:36,0:32:65.64:66,0,77	1/1:31,0:30:24.18:136,24,0	1/1:20,0:20:13.97:71,14,0	1/1:24,0:24:21.55:92,22,0	0/1:17,0:16:8.11:8,0,49	1/1:19,0:16:17.12:67,17,0	1/1:16,0:16:11.05:52,11,0	0/0:42,0:34:5.18:0,5,29	1/1:14,0:14:15.20:77,15,0	1/1:14,0:13:2.76:16,3,0	0/1:32,0:30:0.04:1,0,0	1/1:21,0:21:16.10:75,16,0	0/0:27,0:27:54.18:0,54,865	0/0:21,0:21:39.13:0,39,627	0/1:6,1:7:18.12:18,0,213
chr10	6418814	.	GTGCA	G	2628.17	PASS	AB=0.991;AC=33;AF=0.589;AN=56;BaseQRankSum=10.703;DP=620;FS=6.577;HRun=0;HaplotypeScore=207.1502;InbreedingCoeff=0.0924;MQ=35.85;MQ0=35;MQRankSum=-6.560;QD=5.51;ReadPosRankSum=2.531;VQSLOD=1.6150;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:59.57:0,60,1350	1/1:4,0:4:0.74:42,1,0	0/0:32,0:8:20.10:0,20,223	0/1:52,0:15:17.47:17,0,309	1/1:16,1:17:2.59:21,3,0	0/1:21,0:21:67.34:168,0,67	0/1:24,0:21:18.21:18,0,160	0/0:32,0:27:60.89:0,61,1189	0/1:19,0:18:3.02:230,0,3	0/1:20,1:21:3.42:361,0,3	0/0:9,0:8:0:0,0,0	1/1:25,2:24:22.97:189,23,0	1/1:23,0:20:20.15:226,20,0	0/1:31,0:27:23.05:87,0,23	0/1:28,1:28:64.44:230,0,64	0/1:22,0:22:23.30:102,0,23	0/1:18,0:18:69.78:70,0,132	1/1:19,0:18:11.59:271,12,0	1/1:15,1:13:22.99:331,23,0	1/1:12,0:12:11.72:72,12,0	1/1:37,0:29:7.92:105,8,0	1/1:16,0:16:14.06:134,14,0	1/1:14,0:13:4.53:13,5,0	1/1:26,1:24:4.08:18,4,0	0/1:18,0:18:56.95:57,0,103	0/0:21,0:21:63.19:0,63,1554	0/0:19,0:19:27.48:0,27,1103	0/1:9,0:9:39.75:40,0,338
chr10	6418816	.	GCA	G	3429.48	PASS	AB=0.960;AC=35;AF=0.625;AN=56;BaseQRankSum=10.032;DP=604;FS=4.826;HRun=0;HaplotypeScore=192.4507;InbreedingCoeff=0.1948;MQ=35.40;MQ0=36;MQRankSum=-6.353;QD=7.42;ReadPosRankSum=2.922;VQSLOD=2.7608;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,1:29:41.97:0,42,1000	1/1:4,0:4:0.85:42,1,0	0/0:33,1:8:20.37:0,20,182	0/1:42,4:14:17.76:18,0,246	1/1:10,6:16:2.84:18,3,0	0/1:21,0:21:77.52:105,0,78	0/1:24,0:21:10.60:11,0,160	0/0:29,1:25:66.36:0,66,1075	0/1:16,0:15:9.54:134,0,10	1/1:12,8:20:35.31:418,35,0	0/0:6,3:8:0:0,0,0	1/1:17,10:24:32.27:398,32,0	1/1:18,6:21:30.02:378,30,0	1/1:15,15:26:27.79:491,28,0	0/1:28,0:27:66.23:152,0,66	0/1:21,1:22:26.80:59,0,27	0/1:17,1:18:57.54:58,0,139	1/1:15,4:18:26.24:325,26,0	1/1:16,0:13:15.98:259,16,0	1/1:12,0:12:9.93:59,10,0	1/1:26,7:25:7.68:103,8,0	1/1:16,0:16:7.91:93,8,0	1/1:3,12:13:9.03:147,9,0	1/1:7,20:24:5.54:97,6,0	0/1:18,0:18:25.02:25,0,106	0/0:21,0:21:63.13:0,63,1167	0/0:19,0:19:27.48:0,27,868	0/1:7,2:9:40.54:41,0,237
chr10	6418817	.	CATGT	C	2719.84	PASS	AB=0.952;AC=26;AF=0.464;AN=56;BaseQRankSum=8.871;DP=598;FS=1.431;HRun=0;HaplotypeScore=203.2619;InbreedingCoeff=-0.0083;MQ=35.39;MQ0=36;MQRankSum=-6.484;QD=6.75;ReadPosRankSum=0.520;VQSLOD=2.9114;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:29:59.58:0,60,1514	0/1:3,0:4:14.85:16,0,15	0/0:32,0:7:11.07:0,11,199	0/1:45,0:12:9.78:10,0,313	1/1:16,0:16:0.86:3,1,0	0/1:19,2:21:32.85:286,0,33	0/1:23,1:21:51.37:51,0,82	0/0:30,0:25:69.12:0,69,1538	1/1:15,1:15:18.13:453,18,0	0/1:20,0:20:83.19:139,0,83	0/0:9,0:8:0:0,0,0	0/1:27,0:24:56.59:57,0,100	0/1:24,0:21:56.50:56,0,78	0/0:30,0:26:7.12:0,7,177	1/1:27,1:27:7.77:461,8,0	1/1:21,1:22:0.46:219,0,0	0/1:17,1:18:97.72:109,0,98	0/1:19,0:18:80.80:104,0,81	1/1:14,1:13:12.30:401,12,0	1/1:12,0:12:12.03:134,12,0	0/1:30,0:23:10:33,0,10	1/1:14,2:16:10.98:191,11,0	0/0:15,0:13:8.75:0,9,53	0/1:26,0:24:15.87:18,0,16	0/1:15,2:17:43.81:149,0,44	0/0:21,0:21:63.19:0,63,1672	0/0:19,0:19:50.05:0,50,1222	0/0:9,0:9:0.27:0,0,393
chr10	6418818	.	ATGTG	A	3862.84	PASS	AB=0.841;AC=20;AF=0.357;AN=56;BaseQRankSum=7.679;DP=617;FS=2.995;HRun=0;HaplotypeScore=209.7715;InbreedingCoeff=0.6502;MQ=35.33;MQ0=35;MQRankSum=-6.291;QD=17.72;ReadPosRankSum=0.984;VQSLOD=3.1106;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:65.90:0,66,1543	0/0:2,0:4:2.88:0,3,15	0/0:33,0:6:15.05:0,15,243	0/0:46,0:13:17.75:0,18,356	0/0:10,0:17:2.80:0,3,13	1/1:6,15:21:27.09:448,27,0	1/1:10,14:21:6.26:106,6,0	0/0:29,0:25:59.99:0,60,1392	1/1:3,13:15:39.13:667,39,0	0/0:14,0:21:8.33:0,8,154	0/0:4,0:8:0:0,0,0	0/0:19,0:25:2.57:0,3,230	0/0:12,0:22:17.94:0,18,164	0/0:22,0:27:35.45:0,35,383	1/1:7,21:27:48.01:790,48,0	1/1:7,15:22:21.52:347,22,0	0/1:12,6:18:59.65:155,0,60	0/0:10,0:19:0.59:0,1,94	1/1:6,9:14:36.12:584,36,0	1/1:1,11:12:12.04:207,12,0	0/0:31,0:29:3.25:0,3,21	1/1:5,12:17:17.85:282,18,0	0/0:13,0:13:9.03:0,9,118	0/1:25,0:24:15.74:16,0,40	1/1:9,9:18:15.05:263,15,0	0/0:22,0:23:69.02:0,69,1586	0/0:19,0:19:48.11:0,48,1148	0/0:8,0:9:21.77:0,22,405
chr10	6418846	.	TTG	T	2366.47	PASS	AB=0.769;AC=28;AF=0.500;AN=56;BaseQRankSum=11.006;DP=708;FS=0.000;HRun=0;HaplotypeScore=227.8418;InbreedingCoeff=0.5833;MQ=32.19;MQ0=58;MQRankSum=-7.856;QD=6.78;ReadPosRankSum=-6.343;VQSLOD=1.7403;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:32:69.21:0,69,1080	0/0:5,0:5:6.02:0,6,100	0/0:58,0:7:9.01:0,9,105	0/0:70,0:8:7.99:0,8,72	0/0:14,0:15:9.02:0,9,105	1/1:8,12:20:21.47:140,21,0	1/1:4,23:24:18.66:168,19,0	0/0:40,0:31:72.14:0,72,1082	1/1:7,9:15:19.80:176,20,0	0/0:24,0:20:25.49:0,25,581	0/1:7,0:6:0:0,0,0	1/1:8,25:30:16:265,16,0	1/1:6,16:19:19.57:261,20,0	0/1:13,14:23:17.85:170,0,18	1/1:2,32:33:42.51:252,43,0	1/1:2,18:20:38.40:324,38,0	0/1:11,9:20:43.96:171,0,44	0/1:16,1:16:4.31:4,0,411	1/1:18,8:24:31.99:322,32,0	1/1:8,9:16:14.35:84,14,0	0/0:55,0:45:22.98:0,23,274	0/1:7,12:19:29.87:78,0,30	0/1:7,5:10:6.10:6,0,12	1/1:9,9:16:2.97:20,3,0	1/1:2,12:14:22.36:128,22,0	0/0:33,0:32:64.28:0,64,1185	0/0:15,0:15:39.11:0,39,601	0/0:10,0:10:18.06:0,18,258
chr10	6418859	.	TGCATGTGC	T	3409.37	PASS	AB=0.983;AC=22;AF=0.393;AN=56;BaseQRankSum=8.563;DP=660;FS=24.007;HRun=0;HaplotypeScore=240.7576;InbreedingCoeff=-0.3070;MQ=33.74;MQ0=42;MQRankSum=-6.725;QD=7.84;ReadPosRankSum=-4.645;VQSLOD=0.5720;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:33:72.92:0,73,1954	0/1:6,0:6:28.59:29,0,94	0/0:44,0:3:9.03:0,9,167	0/0:50,0:3:8.39:0,8,104	0/0:14,0:14:8.80:0,9,88	1/1:14,0:14:1.96:205,2,0	0/1:25,0:22:78.16:78,0,101	0/0:40,0:31:86.05:0,86,1986	0/1:11,0:11:5.16:118,0,5	0/1:22,0:18:36.49:36,0,751	0/1:6,0:5:0.03:1,0,0	0/1:33,0:30:17.09:562,0,17	0/1:27,0:24:35.20:314,0,35	0/1:26,0:23:64.63:266,0,65	0/1:33,0:32:21.20:465,0,21	0/1:21,0:21:17.87:298,0,18	0/0:20,0:20:11.73:0,12,229	0/1:16,0:16:57.66:58,0,513	0/1:17,4:20:99:359,0,234	1/1:14,0:12:0.16:123,0,0	0/1:62,0:52:19.44:19,0,241	0/1:19,0:19:55.80:116,0,56	0/1:11,0:9:5.34:107,0,5	0/1:20,0:16:6.69:47,0,7	0/1:12,0:12:5.55:203,0,6	0/1:33,0:32:5.03:5,0,2016	0/0:16,0:16:44.81:0,45,1148	0/0:7,0:7:14.91:0,15,374
chr10	6418860	.	GCA	G	2048.40	PASS	AB=0.955;AC=22;AF=0.393;AN=56;BaseQRankSum=8.465;DP=654;FS=15.572;HRun=0;HaplotypeScore=212.8592;InbreedingCoeff=-0.2386;MQ=33.91;MQ0=41;MQRankSum=-7.281;QD=5.20;ReadPosRankSum=-2.524;VQSLOD=1.5774;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,2:32:61.54:0,62,1288	0/1:6,0:6:9.70:10,0,112	0/0:43,0:3:9.03:0,9,174	0/0:48,0:3:8.51:0,9,100	0/0:14,0:14:8.59:0,9,132	0/1:13,1:14:31.13:153,0,31	0/1:25,0:22:28.16:55,0,28	0/0:40,0:31:83:0,83,1606	1/1:13,0:12:20.29:158,20,0	0/1:22,0:18:19.98:20,0,665	0/1:5,1:5:0:0,0,0	0/1:32,1:30:0.07:289,0,0	0/1:27,1:25:2.65:204,0,3	0/1:26,0:22:26.37:171,0,26	0/1:32,1:32:18.89:261,0,19	1/1:21,0:21:12.52:228,13,0	0/1:18,2:20:33.33:33,0,106	0/1:14,2:16:40.18:40,0,528	0/1:22,0:20:99:205,0,107	0/1:14,0:12:21.53:66,0,22	0/0:54,5:50:4.01:0,4,308	0/1:16,3:19:55.86:56,0,77	0/1:10,1:9:14.67:70,0,15	0/1:18,2:16:7.97:40,0,8	0/1:12,0:12:21.90:112,0,22	0/1:33,0:32:38.66:39,0,1366	0/0:16,0:16:46.85:0,47,769	0/0:6,1:7:17.71:0,18,249
chr10	6418867	.	CGTGTGTGTGTGT	C	7057.97	PASS	AB=0.881;AC=32;AF=0.615;AN=52;BaseQRankSum=5.960;DP=678;FS=12.050;HRun=0;HaplotypeScore=262.4414;InbreedingCoeff=0.3652;MQ=35.54;MQ0=38;MQRankSum=-5.274;QD=15.86;ReadPosRankSum=-2.365;VQSLOD=2.0356;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:36:64.16:0,64,1898	1/1:7,0:7:3.16:56,3,0	./.	./.	0/1:9,0:13:0.49:2,0,0	1/1:17,3:20:35.68:704,36,0	1/1:27,2:25:24.29:493,24,0	0/0:38,0:31:42.14:0,42,768	1/1:12,3:14:15.05:370,15,0	0/1:23,0:20:71.56:72,0,116	0/1:6,0:5:0:0,0,0	1/1:19,1:30:3.89:596,4,0	0/1:19,0:28:73.28:147,0,73	1/1:19,1:22:6.28:313,6,0	1/1:23,11:34:13.58:1262,14,0	1/1:16,6:22:30.09:804,30,0	0/1:17,1:18:99:176,0,112	0/0:17,0:17:13.76:0,14,55	0/1:18,3:21:37.63:524,0,38	1/1:7,6:11:13.21:320,13,0	1/1:39,0:56:3.66:82,4,0	1/1:13,5:19:20.32:367,20,0	0/1:12,0:11:10.12:91,0,10	0/1:19,0:18:55.95:73,0,56	1/1:9,5:14:22.47:607,22,0	0/0:35,0:34:59.23:0,59,1864	0/0:15,0:16:33.11:0,33,977	0/0:6,0:7:15.05:0,15,425
chr10	6419148	.	GA	G	11068.14	PASS	AB=0.765;AC=54;AF=0.964;AN=56;BaseQRankSum=-5.051;DP=315;FS=12.756;HRun=2;HaplotypeScore=43.3346;InbreedingCoeff=-0.0453;MQ=62.05;MQ0=0;MQRankSum=-4.085;QD=35.14;ReadPosRankSum=4.197;VQSLOD=3.8087;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,24:24:63.21:874,63,0	1/1:0,2:2:6.02:84,6,0	0/1:7,6:11:12.04:241,0,12	0/1:17,4:16:99:128,0,186	1/1:0,5:5:15.05:209,15,0	1/1:0,16:16:45.15:628,45,0	1/1:0,15:15:42.14:581,42,0	1/1:0,24:24:69.22:948,69,0	1/1:0,13:13:39.13:544,39,0	1/1:0,10:10:30.10:419,30,0	1/1:0,6:6:15.05:210,15,0	1/1:0,6:6:12.04:167,12,0	1/1:0,10:10:30.10:419,30,0	1/1:0,13:13:39.13:545,39,0	1/1:0,15:15:42.14:586,42,0	1/1:0,13:13:36.12:503,36,0	1/1:0,6:6:18.06:245,18,0	1/1:0,6:6:15.05:210,15,0	1/1:0,12:12:36.09:469,36,0	1/1:0,8:8:18.06:251,18,0	1/1:0,7:7:15.05:209,15,0	1/1:0,8:7:18.06:251,18,0	1/1:0,6:5:15.05:209,15,0	1/1:0,12:12:30.10:419,30,0	1/1:0,7:7:21.07:293,21,0	1/1:0,12:12:36.12:503,36,0	1/1:0,18:18:48.16:670,48,0	1/1:0,6:6:18.06:252,18,0
chr10	6419805	.	ATG	A	201.77	PASS	AB=0.958;AC=21;AF=0.404;AN=52;BaseQRankSum=1.470;DP=631;FS=0.000;HRun=0;HaplotypeScore=98.4487;InbreedingCoeff=0.2888;MQ=46.40;MQ0=31;MQRankSum=-0.022;QD=0.87;ReadPosRankSum=-1.008;VQSLOD=1.2688;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:51:8.81:0,9,70	1/1:11,0:9:2.98:22,3,0	./.	./.	0/0:17,0:15:8.96:0,9,132	0/0:13,0:13:6.02:0,6,85	1/1:29,2:30:8.99:43,9,0	0/0:31,0:27:0:0,0,0	0/1:26,0:25:2.04:2,0,107	1/1:15,0:14:2.97:20,3,0	1/1:15,1:16:3.01:32,3,0	0/1:23,0:21:0:0,0,0	0/0:17,0:16:2.97:0,3,20	0/0:19,0:19:3:0,3,26	0/0:16,0:16:3.01:0,3,44	0/0:20,0:20:18.06:0,18,262	0/1:28,2:30:35.66:36,0,235	0/0:23,0:23:12.03:0,12,157	1/1:28,1:22:3:32,3,0	0/1:7,1:8:23.09:23,0,55	0/0:51,0:46:6.92:0,7,210	0/1:11,0:11:19.22:19,0,101	0/0:9,0:9:2.84:0,3,14	0/0:32,0:30:5.96:0,6,44	0/0:22,0:20:6.02:0,6,86	1/1:9,0:9:2.99:23,3,0	1/1:9,1:9:6.02:64,6,0	1/1:11,1:11:3.01:32,3,0
chr10	6419944	.	CATCCAGAGCGAGCAG	C	2190.68	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=7.295;DP=516;FS=15.378;HRun=0;HaplotypeScore=230.0503;InbreedingCoeff=0.8999;MQ=79.31;MQ0=0;MQRankSum=-7.059;QD=57.65;ReadPosRankSum=1.458;VQSLOD=2.1245;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:93.31:0,93,6072	0/0:9,0:9:24.08:0,24,1597	0/0:19,0:19:51.15:0,51,2764	0/0:27,0:27:63.20:0,63,3127	0/0:18,0:18:45.15:0,45,3108	0/0:16,0:16:39.12:0,39,2678	0/0:21,0:21:60.21:0,60,3849	0/0:27,0:27:72.24:0,72,4977	0/0:24,0:24:63.20:0,63,3967	0/0:14,0:14:39.10:0,39,2391	0/0:13,0:13:30.10:0,30,1664	1/1:2,8:10:21.07:901,21,0	1/1:4,7:11:15.05:657,15,0	1/1:2,5:7:12.04:525,12,0	0/0:28,0:28:84.18:0,84,5824	0/0:20,0:20:54.19:0,54,3573	0/0:31,0:31:84.29:0,84,5901	0/0:23,0:23:63.22:0,63,4542	0/0:19,0:19:48.16:0,48,3099	0/0:13,0:13:36.08:0,36,2451	0/0:35,0:35:89.51:0,90,5517	0/0:18,0:18:39.61:0,40,2725	1/1:2,1:2:3.01:131,3,0	1/1:4,3:7:3.01:131,3,0	0/0:20,0:20:57.20:0,57,4121	0/0:18,0:18:54.19:0,54,3629	0/0:21,0:21:63.18:0,63,4172	0/0:8,0:8:24.08:0,24,1637
chr10	6420116	.	A	AG	800.01	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=7.745;DP=500;FS=55.059;HRun=0;HaplotypeScore=63.2802;InbreedingCoeff=0.9108;MQ=80.43;MQ0=0;MQRankSum=-6.950;QD=22.22;ReadPosRankSum=1.203;VQSLOD=0.3669;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,114,1591	0/0:14,0:14:42.14:0,42,583	0/0:23,0:23:60.14:0,60,760	0/0:19,0:19:46.25:0,46,596	0/0:16,0:16:42.14:0,42,586	0/0:15,0:15:42.14:0,42,587	0/0:15,0:15:45.15:0,45,628	0/0:35,0:35:99:0,102,1427	0/0:21,0:21:63.17:0,63,829	0/0:17,0:17:48.15:0,48,656	0/0:13,0:13:33.10:0,33,445	1/1:0,6:6:9.03:143,9,0	1/1:0,3:3:6.02:96,6,0	1/1:0,10:10:27.09:430,27,0	0/0:25,0:25:75.25:0,75,1047	0/0:20,0:20:57.18:0,57,780	0/0:27,0:27:81.27:0,81,1133	0/0:13,0:13:39.13:0,39,545	0/0:30,0:30:87.29:0,87,1212	0/0:11,0:11:30.10:0,30,406	0/0:21,0:21:60.20:0,60,839	0/0:21,0:21:63.21:0,63,881	1/1:1,8:9:15.05:239,15,0	1/1:2,6:8:3.01:48,3,0	0/0:12,0:12:36.12:0,36,503	0/0:25,0:25:72.23:0,72,983	0/0:25,0:25:72.24:0,72,999	0/0:6,0:6:18.03:0,18,231
chr10	6420320	.	T	TTTCTGGATAAGACC	13667.08	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-0.848;DP=807;FS=57.203;HRun=0;HaplotypeScore=315.5863;InbreedingCoeff=0.9980;MQ=86.30;MQ0=0;MQRankSum=-14.664;QD=131.41;ReadPosRankSum=-1.536;VQSLOD=3.0146;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:68,0:68:99:0,199,7848	0/0:14,0:14:42.14:0,42,1542	0/0:23,0:23:63.21:0,63,2320	0/0:33,0:33:93.32:0,93,3311	0/0:26,0:26:75.26:0,75,2915	0/0:23,0:23:69.24:0,69,2763	0/0:48,0:48:99:0,138,4690	0/0:39,0:39:99:0,111,4171	0/0:38,0:38:99:0,108,4347	0/0:29,0:29:78.25:0,78,2983	0/0:12,0:12:33.11:0,33,1395	1/1:6,10:18:36.08:2197,36,0	1/1:16,8:27:60.21:3408,60,0	1/1:14,5:20:48.12:2494,48,0	0/0:35,0:35:96.32:0,96,3589	0/0:28,0:28:81.28:0,81,2969	0/0:36,0:36:99:0,102,4115	0/0:21,0:21:57.18:0,57,2120	0/0:30,0:30:78.26:0,78,2612	0/0:27,0:27:78.26:0,78,3081	0/0:56,0:56:99:0,166,6800	0/0:25,0:25:75.22:0,75,2841	1/1:9,11:22:60.21:3382,60,0	1/1:9,8:17:42.14:2185,42,0	0/0:23,0:23:66.23:0,66,2428	0/0:35,0:35:99:0,102,3821	0/0:28,0:28:84.27:0,84,3035	0/0:6,0:6:18.06:0,18,761
chr10	6421200	.	GA	G	1841.19	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=9.254;DP=474;FS=15.085;HRun=7;HaplotypeScore=63.3168;InbreedingCoeff=0.9967;MQ=77.59;MQ0=2;MQRankSum=-1.175;QD=25.93;ReadPosRankSum=1.261;VQSLOD=2.8057;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:81.25:0,81,1006	0/0:11,0:11:33.11:0,33,415	0/0:14,0:14:30.10:0,30,377	0/0:14,0:12:23.84:0,24,248	0/0:20,0:20:48.14:0,48,590	0/0:16,0:16:42.13:0,42,517	0/0:18,0:18:48.14:0,48,591	0/0:27,0:27:72.21:0,72,882	0/0:14,0:14:33.10:0,33,404	0/0:17,0:17:48.14:0,48,593	0/0:14,0:14:39.12:0,39,489	1/1:0,16:16:42.09:428,42,0	1/1:2,7:9:27.02:264,27,0	1/1:1,20:21:60.13:606,60,0	0/0:15,0:15:39.12:0,39,490	0/0:16,0:16:45.14:0,45,566	0/0:28,0:28:78.22:0,78,964	0/0:12,0:12:36.12:0,36,452	0/0:20,0:20:45.13:0,45,555	0/0:19,0:18:51.15:0,51,630	0/0:17,0:17:48.10:0,48,572	0/0:15,0:15:32.84:0,33,415	1/1:3,11:14:42.03:420,42,0	1/1:4,7:11:30.04:298,30,0	0/0:12,0:12:30.10:0,30,377	0/0:21,0:21:57.17:0,57,705	0/0:24,0:24:69.21:0,69,855	0/0:6,0:6:18.06:0,18,226
chr10	6421253	.	CA	C	1648.04	PASS	AB=0.741;AC=37;AF=0.661;AN=56;BaseQRankSum=9.195;DP=505;FS=10.344;HRun=15;HaplotypeScore=84.3356;InbreedingCoeff=0.3160;MQ=61.03;MQ0=1;MQRankSum=-1.049;QD=4.13;ReadPosRankSum=7.506;VQSLOD=0.3196;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,1:23:15.10:0,15,347	1/1:3,0:13:20.36:59,20,0	0/1:35,0:15:19.08:19,0,45	0/1:21,0:11:19.04:19,0,34	1/1:3,0:16:24.87:74,25,0	0/1:8,9:18:20.49:126,0,20	1/1:8,12:21:31.37:198,31,0	0/0:30,3:33:7.98:0,8,409	0/1:12,9:21:8.17:62,0,8	1/1:8,0:19:18.73:53,19,0	1/1:2,0:19:32.55:94,33,0	1/1:4,0:9:12.21:35,12,0	1/1:1,0:6:10.18:29,10,0	1/1:4,0:14:22.39:64,22,0	0/1:11,6:17:11.63:46,0,12	1/1:7,6:13:17.42:115,17,0	0/1:21,7:30:25.82:83,0,26	1/1:3,0:13:14.23:41,14,0	1/1:9,9:21:22.22:188,22,0	0/1:7,10:20:1.13:164,0,1	1/1:2,0:12:14.23:42,14,0	0/1:4,7:14:2.57:90,0,3	1/1:3,0:20:35.31:105,35,0	1/1:4,0:13:22.40:64,22,0	0/1:5,8:13:11.86:62,0,12	0/0:13,1:14:32.82:0,33,271	0/0:21,0:21:53.59:0,54,417	0/0:13,1:15:19.95:0,20,264
chr10	6422755	.	GAAAAAAAGAA	G	8889.21	PASS	AB=0.613;AC=19;AF=0.339;AN=56;BaseQRankSum=-0.300;DP=519;FS=0.459;HRun=0;HaplotypeScore=162.6069;InbreedingCoeff=0.8306;MQ=49.70;MQ0=16;MQRankSum=-4.874;QD=48.31;ReadPosRankSum=4.687;VQSLOD=4.6685;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:25:63.22:0,63,2299	0/0:9,0:9:6.02:0,6,91	0/0:34,0:10:8.07:0,8,304	0/0:42,0:10:12.99:0,13,176	0/0:33,0:33:25.03:0,25,202	0/1:7,12:19:89.41:868,0,89	1/1:10,4:13:18.05:455,18,0	0/0:21,0:21:35.91:0,36,1286	1/1:14,12:26:54.18:1340,54,0	0/0:26,0:24:23.57:0,24,312	0/0:14,0:14:15.25:0,15,199	0/0:14,0:14:23.93:0,24,249	0/0:10,0:10:6.02:0,6,77	0/0:10,0:10:14.97:0,15,158	1/1:6,6:12:20.90:486,21,0	1/1:9,12:21:35.62:1233,36,0	1/1:12,7:19:45.13:1101,45,0	0/0:19,0:17:13.51:0,14,295	1/1:13,13:26:36.10:871,36,0	1/1:13,11:24:51.15:1245,51,0	0/0:9,0:10:3.71:0,4,39	1/1:3,8:11:27.09:787,27,0	0/0:15,0:15:20.19:0,20,193	0/0:11,0:11:10.22:0,10,80	1/1:7,5:12:24.08:503,24,0	0/0:9,0:9:27.09:0,27,1142	0/0:11,0:10:15.05:0,15,494	0/0:8,0:8:15.05:0,15,539
chr10	6422762	.	AG	A	1131.37	PASS	AB=0.985;AC=30;AF=0.536;AN=56;BaseQRankSum=10.857;DP=522;FS=7.694;HRun=1;HaplotypeScore=124.6713;InbreedingCoeff=-0.1938;MQ=46.89;MQ0=22;MQRankSum=-7.893;QD=2.79;ReadPosRankSum=4.174;VQSLOD=-0.2216;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:36,0:34:99:125,0,513	1/1:4,0:4:3.37:17,3,0	0/1:57,1:11:6.64:7,0,113	0/0:60,3:15:6.26:0,6,51	1/1:38,0:38:32.21:197,32,0	0/1:19,0:19:76.97:77,0,127	0/1:11,1:10:27.10:27,0,35	0/0:29,0:29:37.39:0,37,643	0/1:22,1:23:91.78:92,0,132	1/1:16,0:15:16.21:79,16,0	1/1:11,0:11:1.16:17,1,0	0/1:16,0:16:15.68:16,0,128	0/0:7,0:7:11.46:0,11,68	0/0:10,0:10:2.49:0,2,74	0/1:9,0:9:12.81:13,0,56	0/1:17,0:17:16.98:126,0,17	0/1:16,1:17:48.38:48,0,103	1/1:19,0:17:30.95:154,31,0	0/1:20,0:20:36.17:36,0,153	0/1:20,1:21:90.92:91,0,122	1/1:4,0:4:5.79:31,6,0	1/1:10,1:11:2.76:98,3,0	0/0:7,1:8:14.21:0,14,95	0/1:9,0:9:2.27:2,0,39	0/1:12,0:12:16.41:16,0,83	0/1:13,0:12:11.89:12,0,234	0/1:12,0:11:0.26:0,0,215	0/1:8,0:8:13.35:13,0,73
chr10	6422763	.	G	GA	673.59	PASS	AB=1.000;AC=16;AF=0.286;AN=56;BaseQRankSum=-1.406;DP=537;FS=3.674;HRun=9;HaplotypeScore=137.4313;InbreedingCoeff=0.3945;MQ=46.16;MQ0=23;MQRankSum=-5.128;QD=4.58;ReadPosRankSum=0.126;VQSLOD=0.7023;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:35:47.72:0,48,385	0/0:4,0:4:5.81:0,6,34	0/0:61,0:12:7.65:0,8,99	0/0:63,1:15:3.76:0,4,78	0/0:37,0:37:11.73:0,12,77	0/0:18,0:18:16.65:0,17,67	0/1:12,0:10:3.19:11,0,3	0/0:32,0:32:42.79:0,43,448	0/0:23,0:23:0.85:0,1,28	0/0:15,0:16:31.89:0,32,171	0/1:13,0:13:1.04:1,0,87	1/1:10,8:18:34.64:363,35,0	1/1:3,4:7:6.02:67,6,0	1/1:3,7:10:12.03:129,12,0	0/0:9,0:9:1.29:0,1,5	0/0:17,0:17:7.06:0,7,38	0/1:17,0:17:9.27:16,0,9	0/0:19,0:18:22.73:0,23,143	0/1:20,0:20:2.25:24,0,2	0/1:21,0:21:10.33:13,0,10	0/0:6,0:6:0.99:0,1,3	0/0:10,0:10:2.39:0,2,18	1/1:4,5:9:14.97:143,15,0	1/1:5,4:9:10.56:63,11,0	0/0:11,0:11:0.41:0,0,5	0/0:13,1:13:4.27:0,4,187	0/1:10,0:10:2.46:2,0,66	0/0:8,0:8:11.29:0,11,94
chr10	6422764	.	AAAAAAAAAG	A	4579.40	PASS	AB=1.000;AC=20;AF=0.357;AN=56;BaseQRankSum=7.747;DP=548;FS=0.000;HRun=0;HaplotypeScore=175.5432;InbreedingCoeff=0.4341;MQ=45.89;MQ0=23;MQRankSum=-4.613;QD=20.09;ReadPosRankSum=8.163;VQSLOD=3.3809;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:36:90.31:0,90,2887	0/0:4,0:4:6.01:0,6,90	0/0:63,0:12:9.63:0,10,444	0/0:67,0:15:33.15:0,33,449	0/1:37,0:37:12.29:12,0,132	0/1:17,0:17:99:469,0,120	1/1:11,1:10:7.64:256,8,0	0/0:34,0:34:78.75:0,79,2366	1/1:23,1:24:23.67:695,24,0	0/1:18,0:17:10.21:10,0,297	0/0:13,0:13:5.02:0,5,194	0/0:16,0:16:41.08:0,41,396	0/0:7,0:7:6.48:0,6,61	0/0:10,0:10:17.80:0,18,179	1/1:9,0:9:20.48:240,20,0	1/1:19,0:19:8.22:679,8,0	1/1:18,1:19:14.25:552,14,0	0/0:20,0:18:3.20:0,3,294	0/1:21,0:21:15.97:398,0,16	1/1:21,1:22:6.85:606,7,0	0/0:7,0:7:1.96:0,2,38	1/1:9,1:10:10.89:469,11,0	0/0:10,0:10:15.93:0,16,148	0/1:9,0:9:2.13:2,0,51	0/1:11,0:11:7.22:192,0,7	0/0:14,0:13:39.13:0,39,1464	0/0:9,0:8:21.05:0,21,640	0/0:8,0:8:18.06:0,18,653
chr10	6422773	.	GAAATCAA	G	4884.24	PASS	AB=1.000;AC=33;AF=0.589;AN=56;BaseQRankSum=10.392;DP=578;FS=23.927;HRun=0;HaplotypeScore=168.2631;InbreedingCoeff=0.1290;MQ=45.88;MQ0=25;MQRankSum=-7.455;QD=12.00;ReadPosRankSum=7.283;VQSLOD=2.1241;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:33:39.33:0,39,1303	1/1:5,0:5:6.02:78,6,0	0/1:71,0:14:16.04:16,0,232	0/0:72,0:18:13.46:0,13,244	1/1:4,28:34:40.25:535,40,0	0/1:17,0:17:99:170,0,257	0/1:16,0:14:99:123,0,257	0/0:34,0:34:10.58:0,11,1656	0/1:23,0:23:99:283,0,272	1/1:12,9:21:42.03:603,42,0	1/1:12,3:15:36.06:472,36,0	1/1:17,0:17:20.56:131,21,0	1/1:6,0:6:3.95:32,4,0	1/1:10,0:10:7.77:44,8,0	0/1:11,0:11:99:108,0,162	0/1:23,0:23:99:287,0,265	0/1:27,0:26:99:235,0,492	1/1:15,3:18:35.94:543,36,0	0/1:19,0:19:99:139,0,126	0/1:20,0:20:99:253,0,311	1/1:8,0:8:15.01:219,15,0	0/1:14,0:14:89.99:231,0,90	1/1:8,0:8:17.15:174,17,0	1/1:7,0:7:11.07:159,11,0	0/1:14,0:14:50.96:51,0,421	0/0:14,0:13:39.13:0,39,911	0/0:7,0:6:18.03:0,18,349	0/0:8,0:8:16.87:0,17,290
chr10	6422775	.	AATC	A	3570.77	PASS	AB=0.998;AC=38;AF=0.679;AN=56;BaseQRankSum=5.485;DP=575;FS=67.313;HRun=0;HaplotypeScore=141.2652;InbreedingCoeff=-0.2620;MQ=45.93;MQ0=26;MQRankSum=-3.591;QD=6.37;ReadPosRankSum=1.476;VQSLOD=0.5892;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:34,0:32:91.40:91,0,534	1/1:5,0:5:6.02:77,6,0	0/1:70,1:14:4.36:4,0,174	0/1:73,2:19:19.32:19,0,179	1/1:34,0:34:33.88:359,34,0	0/1:17,0:17:81.77:82,0,152	0/1:14,0:12:83.09:83,0,134	0/1:35,0:35:79.13:79,0,1065	0/1:22,0:22:99:178,0,173	1/1:21,0:20:41.97:490,42,0	1/1:15,0:15:36.06:317,36,0	1/1:17,0:17:21.88:117,22,0	1/1:5,0:5:3.91:22,4,0	1/1:10,0:10:7.74:37,8,0	0/1:10,0:10:89.61:90,0,120	0/1:22,0:22:99:159,0,165	0/1:26,0:25:99:141,0,260	1/1:19,0:18:34.96:346,35,0	0/1:20,0:20:99:109,0,150	0/1:20,0:20:99:192,0,163	1/1:8,0:8:14.78:128,15,0	0/1:14,0:14:74.52:148,0,75	1/1:7,1:8:17.16:140,17,0	1/1:7,0:7:11.05:95,11,0	0/1:15,0:15:32.27:32,0,239	0/0:14,0:13:38.04:0,38,506	0/1:8,0:7:32.61:33,0,172	0/1:9,0:8:0.98:1,0,128
chr10	6422776	.	ATC	A	3714.32	PASS	AB=0.956;AC=38;AF=0.679;AN=56;BaseQRankSum=5.516;DP=563;FS=82.366;HRun=0;HaplotypeScore=130.3201;InbreedingCoeff=-0.3256;MQ=46.27;MQ0=27;MQRankSum=-4.777;QD=6.77;ReadPosRankSum=1.804;VQSLOD=0.0405;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:27,3:31:99:180,0,471	1/1:0,4:4:6.02:78,6,0	0/1:71,1:14:13.41:13,0,159	0/1:73,0:19:12.06:12,0,164	1/1:33,1:34:40.21:397,40,0	0/1:18,0:18:72.43:72,0,204	0/1:14,0:12:78.15:78,0,150	0/1:27,8:35:87.61:88,0,981	0/1:20,1:21:99:160,0,209	1/1:11,5:16:42.10:495,42,0	1/1:11,3:14:38.26:361,38,0	1/1:16,1:17:21.18:115,21,0	1/1:4,1:5:3.93:25,4,0	1/1:7,2:9:7.75:38,8,0	0/1:11,0:11:85.89:86,0,135	0/1:22,0:22:99:161,0,182	0/1:24,1:24:99:113,0,288	1/1:14,3:16:35.67:354,36,0	0/1:20,0:20:99:106,0,163	0/1:18,0:18:99:193,0,191	1/1:6,1:8:14.51:123,15,0	0/1:14,0:15:99:132,0,121	1/1:7,0:7:17.13:135,17,0	1/1:7,0:7:11.02:81,11,0	0/1:13,1:15:36.77:37,0,237	0/0:14,0:13:29.50:0,29,429	0/1:9,0:8:69.06:69,0,151	0/1:8,1:8:12.33:12,0,113
chr10	6422780	.	A	AG	439.87	PASS	AB=0.846;AC=6;AF=0.107;AN=56;BaseQRankSum=3.054;DP=603;FS=5.635;HRun=0;HaplotypeScore=152.6947;InbreedingCoeff=-0.0551;MQ=48.05;MQ0=28;MQRankSum=-3.848;QD=4.23;ReadPosRankSum=-2.136;VQSLOD=2.8210;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:31:81.45:0,81,707	0/0:4,0:4:5.87:0,6,36	0/0:79,0:16:11.33:0,11,135	0/0:76,0:20:11.01:0,11,170	0/1:34,3:37:23.65:165,0,24	0/0:19,0:19:44.82:0,45,386	0/0:15,0:13:28.66:0,29,228	0/0:33,0:32:87.30:0,87,705	0/0:21,0:21:53.23:0,53,427	0/1:20,0:19:51.95:61,0,52	0/1:8,6:14:27.55:145,0,28	0/0:17,0:17:28.27:0,28,255	0/0:6,0:6:8.88:0,9,58	0/0:10,0:10:8.03:0,8,84	0/0:11,0:11:24.22:0,24,179	0/0:23,0:23:55.42:0,55,450	0/0:27,0:26:59.42:0,59,479	0/1:13,5:17:13.91:130,0,14	0/0:26,0:26:54.18:0,54,377	0/0:20,0:20:56.05:0,56,424	0/1:4,4:8:5.47:54,0,5	0/0:16,0:16:39.96:0,40,303	0/1:7,0:7:1.85:2,0,83	0/0:8,0:8:0.36:0,0,34	0/0:17,0:17:40.19:0,40,350	0/0:17,0:16:43.12:0,43,322	0/0:12,0:11:20.94:0,21,148	0/0:9,0:8:17.98:0,18,160
chr10	6423868	.	T	TG	14684.76	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=19.426;DP=683;FS=10.743;HRun=0;HaplotypeScore=86.1447;InbreedingCoeff=0.9988;MQ=87.17;MQ0=0;MQRankSum=-2.281;QD=41.96;ReadPosRankSum=6.345;VQSLOD=4.3014;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,102,1425	0/0:11,0:11:33.11:0,33,459	0/0:22,0:22:66.22:0,66,909	0/0:25,0:25:69.11:0,69,839	0/0:20,0:20:57.18:0,57,782	1/1:0,31:31:87.29:1301,87,0	1/1:0,21:21:63.21:943,63,0	0/0:40,0:39:99:0,120,1595	1/1:0,22:22:60.20:898,60,0	0/0:29,0:29:81.27:0,81,1132	0/0:26,0:26:75.22:0,75,1000	1/1:0,31:31:87.29:1297,87,0	1/1:0,22:22:63.21:946,63,0	1/1:0,29:29:78.26:1169,78,0	1/1:0,23:23:63.21:941,63,0	1/1:0,13:13:30.10:449,30,0	1/1:0,30:30:87.29:1303,87,0	0/0:23,0:23:66.15:0,66,880	1/1:0,17:17:51.16:747,51,0	1/1:0,29:29:87.29:1301,87,0	0/0:22,0:22:66.20:0,66,890	1/1:0,18:18:51.17:760,51,0	1/1:0,27:27:69.04:1012,69,0	1/1:0,16:16:45.15:674,45,0	1/1:0,21:21:63.21:945,63,0	0/0:36,0:36:99:0,108,1479	0/0:37,0:37:99:0,111,1519	0/0:6,0:6:18.06:0,18,252
chr10	6424520	.	G	GACACACAC	10359.38	PASS	AB=1.000;AC=43;AF=0.768;AN=56;BaseQRankSum=1.642;DP=716;FS=0.491;HRun=0;HaplotypeScore=247.1627;InbreedingCoeff=0.7339;MQ=66.62;MQ0=1;MQRankSum=-9.310;QD=19.77;ReadPosRankSum=-2.516;VQSLOD=3.4237;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:33:52.77:0,53,1387	1/1:9,0:11:12.04:349,12,0	0/0:36,0:30:19.29:0,19,439	0/0:35,0:25:15.04:0,15,305	1/1:23,0:21:5.84:126,6,0	1/1:19,0:19:12.04:375,12,0	1/1:31,0:30:23.99:388,24,0	0/1:43,0:44:44.39:44,0,1235	1/1:20,0:22:8.61:299,9,0	1/1:27,0:27:24.08:653,24,0	1/1:11,0:14:2:48,2,0	1/1:13,12:29:39.13:1454,39,0	1/1:17,9:28:39.13:1475,39,0	1/1:7,2:11:6.02:247,6,0	1/1:18,0:18:15.03:290,15,0	1/1:27,0:29:12.04:374,12,0	1/1:35,0:34:36.06:832,36,0	1/1:18,0:17:18:403,18,0	1/1:22,0:22:24.07:543,24,0	1/1:23,0:22:15.05:344,15,0	1/1:17,0:17:5.68:89,6,0	1/1:26,0:25:9.02:173,9,0	1/1:22,7:30:17.71:671,18,0	1/1:18,9:30:29.75:1092,30,0	1/1:16,0:15:3.01:89,3,0	0/0:43,0:47:81.16:0,81,1896	0/0:26,0:27:51.15:0,51,1198	0/0:13,0:13:27.09:0,27,626
chr10	6425877	.	A	ACATTCGC	16397.03	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-0.026;DP=751;FS=0.757;HRun=0;HaplotypeScore=178.3991;InbreedingCoeff=0.9728;MQ=85.81;MQ0=0;MQRankSum=-15.028;QD=41.41;ReadPosRankSum=2.003;VQSLOD=4.5522;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,99,2207	0/0:10,0:10:21.07:0,21,476	0/0:35,0:35:60.16:0,60,1119	0/0:23,0:23:45.08:0,45,847	0/0:19,0:19:39.12:0,39,873	1/1:7,12:21:30.10:1123,30,0	1/1:19,11:37:30.10:1122,30,0	0/0:19,0:19:21.06:0,21,435	1/1:8,11:24:36.12:1344,36,0	0/0:28,0:28:45.13:0,45,952	0/0:11,0:11:27.09:0,27,615	1/1:15,13:34:48.16:1785,48,0	1/1:9,11:26:29.99:1122,30,0	1/1:14,16:34:51.18:1903,51,0	1/1:12,12:27:39.10:1353,39,0	1/1:9,11:26:27.09:1010,27,0	1/1:16,11:31:33.04:1065,33,0	0/0:32,0:31:81.19:0,81,1713	1/1:14,4:26:35.98:700,36,0	1/1:5,1:12:3.01:112,3,0	0/0:82,0:82:99:0,172,3758	1/1:5,11:26:32.59:996,33,0	1/1:7,7:21:18.06:505,18,0	1/1:10,12:28:24.08:896,24,0	1/1:7,14:22:42.14:1362,42,0	0/0:26,0:26:66.22:0,66,1481	0/0:22,0:22:57.06:0,57,1036	0/0:11,0:11:27.06:0,27,586
chr10	6426236	.	G	GA	20259.55	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=-0.302;DP=661;FS=11.024;HRun=1;HaplotypeScore=78.6263;InbreedingCoeff=0.9964;MQ=86.02;MQ0=0;MQRankSum=-7.924;QD=43.38;ReadPosRankSum=5.238;VQSLOD=4.0521;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,138,1907	1/1:0,6:6:15.05:240,15,0	0/0:26,0:26:75.22:0,75,983	0/0:25,0:25:68.96:0,69,936	1/1:0,16:16:42.14:671,42,0	1/1:0,20:20:60.20:959,60,0	1/1:0,18:18:45.15:718,45,0	0/0:28,0:28:81.25:0,81,1115	1/1:0,13:13:36.12:575,36,0	1/1:0,25:25:66.23:1055,66,0	1/1:0,16:16:45.15:719,45,0	1/1:0,26:26:78.27:1246,78,0	1/1:1,22:23:66.23:1055,66,0	1/1:0,32:32:93.32:1486,93,0	1/1:1,32:33:90.31:1438,90,0	1/1:0,17:17:51.17:815,51,0	1/1:0,31:31:84.29:1342,84,0	1/1:2,30:32:84.29:1343,84,0	1/1:1,13:14:42.14:655,42,0	1/1:0,11:11:30.10:479,30,0	1/1:1,41:42:99:1727,108,0	1/1:3,21:24:57.19:909,57,0	1/1:0,20:20:51.17:814,51,0	1/1:0,26:26:66.23:1055,66,0	1/1:1,21:22:60.20:958,60,0	0/0:23,1:24:24.25:0,24,902	0/0:35,0:35:99:0,102,1425	0/0:9,0:9:27.09:0,27,377
chr10	6426482	.	A	AG	14686.25	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=12.167;DP=583;FS=7.439;HRun=0;HaplotypeScore=196.9732;InbreedingCoeff=0.9837;MQ=83.94;MQ0=0;MQRankSum=-14.407;QD=36.62;ReadPosRankSum=4.194;VQSLOD=3.5129;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,129,1804	1/1:0,10:10:17.85:276,18,0	0/0:20,0:20:54.65:0,55,757	0/0:34,0:33:63.10:0,63,1096	1/1:0,17:17:30.10:478,30,0	1/1:0,22:22:45.15:717,45,0	1/1:0,22:22:54.18:862,54,0	0/0:30,0:30:87.27:0,87,1185	1/1:0,26:26:75.26:1196,75,0	1/1:0,19:19:54.18:862,54,0	1/1:0,9:9:9.03:142,9,0	1/1:0,25:25:63.21:1001,63,0	1/1:0,31:31:78.06:1243,78,0	1/1:0,25:25:69.24:1096,69,0	1/1:0,19:19:54.18:861,54,0	1/1:0,21:21:60.20:956,60,0	1/1:0,27:27:63.21:1005,63,0	1/1:0,21:21:54.18:862,54,0	1/1:0,10:10:30.09:455,30,0	1/1:0,9:9:18.06:286,18,0	1/1:0,24:24:17.74:287,18,0	1/1:0,14:14:29.95:477,30,0	1/1:0,13:13:33.11:526,33,0	1/1:0,19:19:26.33:429,26,0	1/1:0,18:18:42.14:669,42,0	0/0:19,0:19:57.19:0,57,797	0/0:27,0:27:81.27:0,81,1129	0/0:8,0:8:21.05:0,21,274
chr10	6426491	.	AGGATCCACT	A	22786.55	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=16.321;DP=535;FS=6.913;HRun=0;HaplotypeScore=231.1968;InbreedingCoeff=0.9540;MQ=87.19;MQ0=0;MQRankSum=-16.733;QD=66.43;ReadPosRankSum=6.374;VQSLOD=3.6416;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,129,6009	1/1:1,5:6:15.05:473,15,0	0/0:21,0:21:50.67:0,51,2009	0/0:36,0:35:82.24:0,82,3146	1/1:2,15:17:30.02:869,30,0	1/1:2,12:14:32.69:981,33,0	1/1:9,11:20:42.11:899,42,0	0/0:35,0:35:99:0,99,4179	1/1:1,22:23:66.23:1972,66,0	1/1:2,15:18:48.16:1514,48,0	1/1:1,8:9:9.03:284,9,0	1/1:3,19:22:57.17:1650,57,0	1/1:3,24:27:75.26:2317,75,0	1/1:3,18:21:54.19:1702,54,0	1/1:3,14:17:45.15:1249,45,0	1/1:3,16:19:54.19:1698,54,0	1/1:5,18:23:51.16:1396,51,0	1/1:3,15:18:45.15:1309,45,0	1/1:2,4:6:12.04:376,12,0	1/1:1,6:7:6.02:189,6,0	1/1:5,15:20:12.71:379,13,0	1/1:2,10:12:27.09:852,27,0	1/1:0,10:10:24.08:758,24,0	1/1:3,15:18:23.83:747,24,0	1/1:0,16:16:39.13:1171,39,0	0/0:23,0:23:69.18:0,69,2963	0/0:29,0:29:87.30:0,87,4164	0/0:5,0:5:15.05:0,15,744
chr10	6426853	.	AG	A	7956.63	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=10.021;DP=692;FS=0.621;HRun=3;HaplotypeScore=152.3461;InbreedingCoeff=0.9996;MQ=79.47;MQ0=0;MQRankSum=-3.987;QD=33.86;ReadPosRankSum=1.031;VQSLOD=4.0120;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,144,2028	0/0:12,0:12:30.10:0,30,432	0/0:19,0:18:51.03:0,51,644	0/0:17,0:17:42.10:0,42,582	0/0:27,0:27:75.23:0,75,1060	1/1:1,17:18:45.14:558,45,0	1/1:0,23:23:60.19:744,60,0	0/0:43,0:43:99:0,126,1798	1/1:1,16:17:45.14:557,45,0	0/0:41,0:41:99:0,114,1639	0/0:17,0:17:39.13:0,39,560	0/0:21,0:21:57.19:0,57,821	0/0:19,0:19:57.18:0,57,802	0/0:22,0:22:66.22:0,66,944	1/1:1,40:41:99:1447,117,0	1/1:0,25:25:75.24:930,75,0	1/1:0,24:24:66.21:818,66,0	0/0:27,0:27:78.25:0,78,1105	1/1:0,29:29:84.23:1009,84,0	1/1:0,17:17:45.14:558,45,0	0/0:32,0:32:87.29:0,87,1253	1/1:0,20:20:48.15:595,48,0	0/0:27,0:27:69.23:0,69,994	0/0:30,0:30:84.28:0,84,1197	1/1:0,21:21:60.19:742,60,0	0/0:25,0:25:75.25:0,75,1080	0/0:21,0:21:60.20:0,60,864	0/0:8,0:8:24.08:0,24,346
chr10	6427626	.	GTTTA	G	19904.41	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=12.711;DP=710;FS=1.477;HRun=0;HaplotypeScore=127.1485;InbreedingCoeff=0.9892;MQ=70.72;MQ0=0;MQRankSum=-4.503;QD=38.88;ReadPosRankSum=7.387;VQSLOD=5.0019;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,114,2816	1/1:2,5:7:9.03:143,9,0	0/0:31,0:31:60:0,60,1356	0/0:20,0:19:38.83:0,39,779	1/1:3,30:33:72.16:1233,72,0	1/1:5,24:29:54.19:970,54,0	1/1:3,24:27:48.16:862,48,0	0/0:34,0:34:78.25:0,78,1885	1/1:1,17:18:36.09:646,36,0	1/1:7,33:40:99:1728,99,0	1/1:4,15:19:42.05:686,42,0	1/1:0,25:25:57.19:1006,57,0	1/1:2,26:28:75.26:1347,75,0	1/1:3,20:23:51.17:916,51,0	1/1:2,28:30:66.23:1185,66,0	1/1:2,20:22:54.19:970,54,0	1/1:2,27:30:60.21:1078,60,0	1/1:2,19:21:37.31:698,37,0	1/1:2,16:18:48.12:800,48,0	1/1:1,21:22:45.07:741,45,0	1/1:5,20:25:33.05:593,33,0	1/1:1,30:31:84.12:1434,84,0	1/1:0,22:22:60.20:1038,60,0	1/1:2,23:25:60.21:1078,60,0	1/1:3,14:17:42.14:754,42,0	0/0:28,1:29:27.41:0,27,1896	0/0:19,0:19:57.13:0,57,1411	0/0:25,0:25:66.17:0,66,1623
chr10	6427885	.	TTCTCTCTCTCTC	T	1556.86	PASS	AB=0.987;AC=26;AF=0.565;AN=46;BaseQRankSum=1.845;DP=487;FS=32.937;HRun=0;HaplotypeScore=164.0488;InbreedingCoeff=-0.1141;MQ=66.34;MQ0=17;MQRankSum=2.237;QD=5.12;ReadPosRankSum=2.593;VQSLOD=1.4166;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:19,1:19:6.01:62,6,0	./.	./.	0/0:27,0:17:0:0,0,0	1/1:14,4:19:3.01:52,3,0	0/1:26,0:28:64.14:64,0,86	0/0:21,0:19:9.91:0,10,110	0/0:37,0:36:5.40:0,5,14	0/1:13,0:12:10.05:37,0,10	1/1:20,1:22:8.20:291,8,0	1/1:9,3:12:2.92:49,3,0	0/1:16,0:15:18.01:18,0,56	0/1:19,0:19:71.81:72,0,146	./.	0/0:16,0:15:5.59:0,6,25	0/1:10,0:10:44.17:44,0,113	0/0:17,0:16:6.73:0,7,43	0/1:14,1:13:90.61:92,0,91	0/1:15,0:13:25.13:25,0,38	./.	1/1:23,0:24:2.97:20,3,0	0/1:14,0:13:28.27:28,0,41	1/1:2,0:2:3:29,3,0	0/1:21,0:20:29.10:142,0,29	./.	1/1:18,1:22:8.21:470,8,0	0/1:16,0:16:0.10:117,0,0	1/1:13,0:9:3.01:81,3,0
chr10	6427941	.	CTGTGTGTGTGTG	C	1900.98	PASS	AB=0.892;AC=14;AF=0.304;AN=46;BaseQRankSum=1.503;DP=538;FS=1.459;HRun=0;HaplotypeScore=170.4531;InbreedingCoeff=0.5488;MQ=37.40;MQ0=55;MQRankSum=-5.601;QD=11.59;ReadPosRankSum=0.857;VQSLOD=2.5741;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:32:0.47:0,0,1	./.	./.	./.	0/0:20,0:22:0:0,0,1	0/0:33,0:30:4.48:0,4,142	0/0:25,0:22:12.65:0,13,165	1/1:16,3:17:8.91:123,9,0	0/0:21,0:18:12.04:0,12,145	1/1:17,0:17:9.03:251,9,0	./.	0/0:14,0:13:8.96:0,9,118	0/0:16,0:16:8.77:0,9,152	0/0:20,0:19:23.44:0,23,360	0/0:29,0:24:23.35:0,23,254	0/0:21,0:21:23.75:0,24,181	0/1:23,0:22:52.33:52,0,298	1/1:12,0:11:5.11:166,5,0	0/1:11,0:12:21.19:21,0,143	./.	0/0:24,0:18:2.23:0,2,10	0/0:13,0:11:15.05:0,15,467	0/0:6,0:15:2.81:0,3,31	0/0:36,0:31:20.11:0,20,228	0/0:14,0:13:12.04:0,12,307	1/1:24,6:29:22.19:745,22,0	1/1:17,5:21:14.85:493,15,0	1/1:14,2:7:6.02:202,6,0
chr10	6428451	.	G	GCACACACA	11168.70	PASS	AB=0.628;AC=39;AF=0.696;AN=56;BaseQRankSum=9.201;DP=850;FS=3.370;HRun=0;HaplotypeScore=224.0086;InbreedingCoeff=0.6024;MQ=60.72;MQ0=4;MQRankSum=-1.016;QD=18.31;ReadPosRankSum=7.527;VQSLOD=2.8974;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:66,0:66:99:0,123,3675	1/1:4,9:17:12.04:445,12,0	0/0:44,0:33:19.60:0,20,847	0/0:41,0:36:59.26:0,59,1550	1/1:5,21:34:39.12:1251,39,0	1/1:3,0:20:24.08:521,24,0	1/1:12,0:37:37.35:724,37,0	0/0:39,0:39:87.12:0,87,1955	1/1:6,0:25:38.96:328,39,0	1/1:9,18:34:75.17:1784,75,0	1/1:6,18:27:24.08:934,24,0	1/1:4,0:28:50.90:429,51,0	1/1:1,0:10:3:25,3,0	1/1:5,0:28:16.82:433,17,0	1/1:7,0:30:50.94:426,51,0	1/1:5,0:28:29.42:330,29,0	0/1:6,0:34:53.16:343,0,53	1/1:6,16:27:25.64:870,26,0	1/1:5,0:15:26.99:240,27,0	1/1:0,0:30:53.98:481,54,0	0/1:13,23:46:1.96:99,0,2	1/1:9,0:32:38.42:406,38,0	1/1:3,0:22:53.84:437,54,0	0/1:6,0:31:46.12:303,0,46	0/1:2,0:16:1.02:170,0,1	0/1:33,2:36:99:188,0,1832	0/0:38,0:41:99:0,117,2767	0/0:7,0:7:15.05:0,15,395
chr10	6428993	.	CT	C	13712.96	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=16.772;DP=754;FS=0.320;HRun=8;HaplotypeScore=183.1448;InbreedingCoeff=0.9957;MQ=81.79;MQ0=0;MQRankSum=-4.842;QD=24.36;ReadPosRankSum=4.781;VQSLOD=2.7465;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:46:99:0,135,1573	1/1:0,13:13:36.06:347,36,0	0/0:25,0:25:65.77:0,66,699	0/0:18,1:18:13.35:0,13,402	1/1:6,29:35:84.12:811,84,0	1/1:2,28:30:69.11:666,69,0	1/1:2,20:22:54.08:521,54,0	0/0:28,0:28:72.19:0,72,840	1/1:2,30:32:84.13:810,84,0	1/1:2,36:38:99:1028,108,0	1/1:4,30:34:84.07:800,84,0	1/1:1,22:23:54.09:521,54,0	1/1:4,16:20:48.07:463,48,0	1/1:3,22:25:63.10:608,63,0	1/1:2,29:31:84.13:811,84,0	1/1:6,24:30:72.11:695,72,0	1/1:6,18:24:45.06:434,45,0	1/1:0,22:22:66.11:637,66,0	1/1:4,21:25:63.03:592,63,0	1/1:6,29:35:84.13:810,84,0	1/1:1,11:12:30.05:290,30,0	1/1:1,30:31:81.12:781,81,0	1/1:1,28:29:68.91:666,69,0	1/1:0,29:29:81.13:782,81,0	1/1:1,22:23:66.11:637,66,0	0/0:19,0:19:54.16:0,54,643	0/0:40,0:40:99:0,105,1234	0/0:14,0:14:42.13:0,42,507
chr10	6429963	.	G	GGCCTCC	3968.42	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=3.218;DP=367;FS=16.728;HRun=0;HaplotypeScore=103.3063;InbreedingCoeff=0.7319;MQ=66.97;MQ0=0;MQRankSum=-8.037;QD=14.81;ReadPosRankSum=-0.521;VQSLOD=1.1202;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:16:26.77:210,27,0	0/0:4,0:4:12.04:0,12,254	0/0:6,0:6:5.15:0,5,121	0/0:12,0:12:15.48:0,15,231	0/0:6,0:6:12.04:0,12,216	1/1:2,4:6:6.02:105,6,0	1/1:13,19:37:21.07:548,21,0	1/1:6,0:6:8.94:68,9,0	1/1:4,5:12:12.04:368,12,0	0/0:15,0:15:33.04:0,33,583	0/0:1,0:1:3.01:0,3,64	1/1:22,0:22:25.96:177,26,0	1/1:16,0:16:33.16:214,33,0	1/1:25,0:25:32.01:201,32,0	1/1:3,3:6:9.03:297,9,0	1/1:4,6:12:12.04:396,12,0	1/1:9,11:25:14.96:492,15,0	0/0:17,0:17:45.07:0,45,826	1/1:6,0:6:3.01:97,3,0	1/1:1,5:6:15:221,15,0	0/0:38,0:37:71.17:0,71,1109	1/1:0,3:3:2.48:50,2,0	1/1:2,0:2:3:26,3,0	1/1:33,0:32:32.86:231,33,0	1/1:2,3:7:3.01:52,3,0	1/1:15,0:15:17.65:152,18,0	1/1:7,0:6:5.54:25,6,0	1/1:4,0:4:3.01:41,3,0
chr10	6430154	.	TTCTTCC	T	12889.96	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=10.809;DP=548;FS=9.113;HRun=0;HaplotypeScore=139.1673;InbreedingCoeff=0.9601;MQ=65.16;MQ0=1;MQRankSum=-13.442;QD=35.31;ReadPosRankSum=1.214;VQSLOD=4.0158;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,16:28:33.07:646,33,0	0/0:12,0:12:30.10:0,30,956	0/0:32,0:25:16.18:0,16,1087	0/0:32,0:28:44.36:0,44,1264	0/0:12,0:12:30.10:0,30,956	1/1:3,13:16:27.09:571,27,0	1/1:11,10:21:27.09:579,27,0	1/1:17,14:31:39.52:657,40,0	1/1:7,21:28:48.16:1029,48,0	0/0:31,0:31:69.23:0,69,2085	0/0:10,0:10:24.08:0,24,775	1/1:4,19:23:57.20:1222,57,0	1/1:2,10:12:27.09:579,27,0	1/1:7,17:24:48.16:1027,48,0	1/1:2,8:10:21.07:450,21,0	1/1:1,6:7:15.05:322,15,0	1/1:8,11:19:21.07:450,21,0	0/0:34,0:34:94.12:0,94,2958	1/1:4,7:11:21.06:411,21,0	1/1:4,11:15:27.09:579,27,0	0/0:20,0:20:48.16:0,48,1562	1/1:3,11:14:26.68:578,27,0	1/1:3,9:12:14.80:321,15,0	1/1:7,17:24:27.05:534,27,0	1/1:6,17:23:48.16:1029,48,0	1/1:3,21:24:63.18:1261,63,0	1/1:8,12:20:26.96:579,27,0	1/1:1,2:3:3.01:64,3,0
chr10	6430715	.	T	TG	9649.74	PASS	AB=1.000;AC=53;AF=0.946;AN=56;BaseQRankSum=-1.560;DP=600;FS=2.693;HRun=8;HaplotypeScore=105.7706;InbreedingCoeff=0.6604;MQ=75.08;MQ0=1;MQRankSum=-1.720;QD=16.47;ReadPosRankSum=3.468;VQSLOD=4.7557;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:24:12.21:83,12,0	1/1:1,10:11:27.08:310,27,0	0/0:14,0:12:14.22:0,14,135	0/1:13,0:13:8.32:8,0,19	1/1:5,20:25:63.16:706,63,0	1/1:23,0:23:59.18:384,59,0	1/1:22,0:22:53.13:342,53,0	1/1:5,3:18:28.90:172,29,0	1/1:21,0:21:56.26:382,56,0	1/1:5,32:37:71.81:1064,72,0	1/1:2,21:23:57.14:643,57,0	1/1:5,1:22:45.40:248,45,0	1/1:9,0:15:11.49:63,11,0	1/1:3,0:20:39.77:202,40,0	1/1:32,0:32:94.55:613,95,0	1/1:22,0:22:61.90:386,62,0	1/1:15,0:15:35.48:228,35,0	1/1:1,26:27:72.21:831,72,0	1/1:20,0:20:49.35:279,49,0	1/1:21,0:21:56.22:375,56,0	1/1:1,13:14:30.09:346,30,0	1/1:27,0:27:65.12:440,65,0	1/1:5,0:24:51.29:264,51,0	1/1:3,0:19:42.61:217,43,0	1/1:15,0:15:38.31:241,38,0	1/1:6,2:20:37.30:228,37,0	1/1:7,1:38:82.46:436,82,0	1/1:4,0:17:31.25:159,31,0
chr10	6430720	.	G	GA	9431.73	PASS	AB=1.000;AC=32;AF=0.571;AN=56;BaseQRankSum=-9.689;DP=587;FS=2.414;HRun=0;HaplotypeScore=96.1560;InbreedingCoeff=0.8162;MQ=75.69;MQ0=1;MQRankSum=0.416;QD=25.29;ReadPosRankSum=5.879;VQSLOD=5.8551;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:22.24:0,22,146	1/1:10,0:10:22.95:106,23,0	0/0:13,0:11:12.28:0,12,228	0/1:15,0:15:10.70:11,0,111	1/1:23,0:24:31.40:187,31,0	1/1:0,23:23:60.20:878,60,0	1/1:0,22:22:54.18:789,54,0	0/0:20,0:20:39.88:0,40,289	1/1:1,20:21:57.19:825,57,0	0/1:37,0:37:40.20:191,0,40	1/1:23,0:23:7.27:136,7,0	0/0:20,0:20:35.77:0,36,232	0/0:12,0:12:20.25:0,20,136	0/0:18,0:18:42.60:0,43,233	1/1:0,33:33:96.32:1403,96,0	1/1:0,22:22:63.21:922,63,0	1/1:0,16:16:36.12:527,36,0	1/1:27,0:27:41.40:178,41,0	1/1:1,21:22:63.16:846,63,0	1/1:0,23:23:60.14:846,60,0	1/1:14,0:14:2.18:54,2,0	1/1:0,27:27:66.22:962,66,0	0/0:25,0:24:49.57:0,50,288	0/0:18,0:18:49.70:0,50,295	1/1:0,14:14:39.13:570,39,0	0/0:19,0:19:36.68:0,37,302	0/0:36,0:37:79.68:0,80,450	0/0:15,0:15:37.76:0,38,221
chr10	6430862	.	T	TC	17827.91	PASS	AB=0.556;AC=39;AF=0.696;AN=56;BaseQRankSum=-10.608;DP=674;FS=3.810;HRun=3;HaplotypeScore=64.4719;InbreedingCoeff=0.9325;MQ=81.59;MQ0=0;MQRankSum=-4.467;QD=36.38;ReadPosRankSum=1.872;VQSLOD=5.6087;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,45:47:99:1672,120,0	0/0:11,0:11:33.10:0,33,396	0/0:20,0:20:54.16:0,54,639	0/0:16,0:16:45.14:0,45,536	0/0:35,0:35:99:0,102,1223	1/1:0,22:22:60.20:840,60,0	1/1:2,20:22:51.17:714,51,0	1/1:4,28:32:84.25:1140,84,0	1/1:0,15:15:39.13:541,39,0	0/0:26,0:26:72.05:0,72,842	0/0:24,0:24:69.19:0,69,806	1/1:1,24:25:72.24:1008,72,0	1/1:0,20:20:54.18:754,54,0	1/1:2,23:25:66.22:923,66,0	1/1:1,24:25:66.22:924,66,0	1/1:0,18:18:54.18:756,54,0	1/1:1,24:25:69.23:966,69,0	0/0:14,0:14:42.13:0,42,504	1/1:4,14:18:45.15:630,45,0	1/1:3,27:30:75.25:1050,75,0	0/0:38,0:38:96.28:0,96,1139	1/1:1,22:23:66.22:923,66,0	1/1:4,25:29:66.22:913,66,0	1/1:0,21:21:57.19:798,57,0	1/1:2,24:26:60.20:840,60,0	0/1:5,20:25:5.81:756,0,6	1/1:1,28:29:81.27:1134,81,0	1/1:0,13:13:39.13:546,39,0
chr10	6431242	.	C	CTTGCTTGTCTCTATCACCAGCCTTATTCCAAAGA	78777.32	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=17.467;DP=787;FS=3.506;HRun=0;HaplotypeScore=643.0772;InbreedingCoeff=0.9976;MQ=84.27;MQ0=1;MQRankSum=-21.247;QD=238.00;ReadPosRankSum=0.853;VQSLOD=3.1438;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:37,0:37:84.22:7404,84,0	0/0:6,0:6:15.05:0,15,1096	0/0:28,0:28:69.20:0,69,2626	0/0:32,0:32:69.23:0,69,2550	0/0:22,0:22:66.18:0,66,4327	0/0:22,0:22:57.20:0,57,3564	0/0:28,0:28:84.28:0,84,6027	1/1:42,0:42:99:6433,111,0	0/0:26,0:26:72.25:0,72,4988	0/0:23,0:23:66.23:0,66,4653	0/0:19,0:19:57.20:0,57,3973	1/1:37,0:37:99:10784,99,0	1/1:38,0:38:99:10551,111,0	1/1:41,0:41:99:12195,123,0	0/0:34,0:34:96.30:0,96,6309	0/0:21,0:21:60.21:0,60,4219	0/0:30,0:30:87.26:0,87,6350	0/0:21,0:21:57.17:0,57,3462	0/0:25,0:25:66.21:0,66,3676	0/0:36,0:36:88.36:0,88,6780	0/0:29,0:28:84.25:0,84,6127	0/0:30,0:30:87.29:0,87,6126	1/1:29,0:29:80.93:5415,81,0	1/1:26,1:29:50.67:5120,51,0	0/0:24,0:24:69.23:0,69,4702	1/1:28,0:28:75.19:6867,75,0	1/1:39,0:38:99:10744,108,0	1/1:10,1:11:30.10:3266,30,0
chr10	6432414	.	AG	A	9225.75	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=20.887;DP=699;FS=11.882;HRun=3;HaplotypeScore=140.1487;InbreedingCoeff=0.9994;MQ=78.67;MQ0=0;MQRankSum=-5.071;QD=34.42;ReadPosRankSum=2.186;VQSLOD=2.8680;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,37:38:99:1299,105,0	0/0:7,0:7:21.07:0,21,302	0/0:21,0:20:59.93:0,60,813	0/0:24,0:24:66.05:0,66,816	0/0:30,0:30:81.27:0,81,1164	0/0:22,0:22:66.22:0,66,950	0/0:26,0:26:75.24:0,75,1060	1/1:1,22:23:66.20:806,66,0	0/0:29,0:29:87.29:0,87,1251	0/0:24,0:24:69.23:0,69,993	0/0:15,0:15:45.15:0,45,645	1/1:2,35:37:99:1301,105,0	1/1:1,26:27:72.23:892,72,0	1/1:1,21:22:60.19:743,60,0	0/0:27,0:27:78.23:0,78,1071	0/0:34,0:34:99:0,99,1426	0/0:33,0:33:99:0,99,1426	0/0:13,0:13:33.11:0,33,475	0/0:22,0:22:63.18:0,63,868	0/0:17,0:17:48.16:0,48,690	0/0:30,0:30:87.29:0,87,1250	0/0:30,0:30:84.27:0,84,1192	1/1:1,21:22:63.20:780,63,0	1/1:1,31:32:87.27:1078,87,0	0/0:27,0:27:69.23:0,69,993	1/1:1,26:26:75.22:916,75,0	1/1:0,24:24:72.23:891,72,0	1/1:1,14:15:42.13:520,42,0
chr10	6432720	.	TGC	T	1466.31	PASS	AB=1.000;AC=39;AF=0.750;AN=52;BaseQRankSum=10.033;DP=568;FS=30.515;HRun=0;HaplotypeScore=202.4754;InbreedingCoeff=0.7639;MQ=45.30;MQ0=1;MQRankSum=-7.358;QD=3.73;ReadPosRankSum=1.128;VQSLOD=1.2945;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:30,1:31:2.99:24,3,0	0/0:10,0:10:30:0,30,320	./.	./.	0/0:25,0:25:53.72:0,54,497	1/1:21,1:22:8.93:66,9,0	1/1:20,0:20:11.84:81,12,0	1/1:24,0:21:14.84:100,15,0	1/1:16,0:16:5.44:24,5,0	0/0:24,0:24:27.37:0,27,452	0/0:16,0:16:27.02:0,27,329	1/1:18,0:18:10.52:51,11,0	1/1:14,0:14:14.34:80,14,0	1/1:20,0:20:2.84:14,3,0	1/1:22,0:21:4.35:17,4,0	1/1:14,2:16:11.67:76,12,0	1/1:17,0:17:20.87:117,21,0	0/0:35,0:35:81.05:0,81,1063	1/1:16,0:12:22.71:139,23,0	1/1:21,0:21:2.99:24,3,0	0/0:54,0:52:99:0,102,1061	1/1:22,0:22:11.96:94,12,0	1/1:16,0:16:5.98:47,6,0	0/1:18,0:18:0:0,0,0	1/1:23,0:22:13.49:85,13,0	1/1:23,0:24:43.78:285,44,0	1/1:19,0:20:23.73:137,24,0	1/1:12,0:13:31.82:182,32,0
chr10	6432729	.	GCGCGCACACA	G	5442.33	PASS	AC=40;AF=0.741;AN=54;BaseQRankSum=6.811;DP=535;FS=44.402;HRun=0;HaplotypeScore=234.7918;InbreedingCoeff=0.7725;MQ=44.96;MQ0=4;MQRankSum=-8.176;QD=15.59;ReadPosRankSum=-0.311;VQSLOD=2.4659;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:24:6.48:73,6,0	0/0:11,0:11:30.10:0,30,1152	0/0:5,0:2:0:0,0,0	./.	0/0:27,0:27:57.18:0,57,1773	1/1:12,8:20:12.04:209,12,0	1/1:12,6:18:12.04:223,12,0	1/1:15,0:12:17.89:199,18,0	1/1:10,8:18:7.43:170,7,0	0/0:23,0:23:68.63:0,69,1850	0/0:16,0:16:33.06:0,33,1221	1/1:9,0:15:12.04:255,12,0	1/1:12,0:13:15.05:259,15,0	1/1:13,0:15:3.01:93,3,0	1/1:9,7:15:6.02:187,6,0	1/1:9,6:14:12.04:232,12,0	1/1:5,11:16:12.80:602,13,0	0/0:38,0:38:99:0,114,4085	1/1:12,3:11:30.08:561,30,0	1/1:6,13:20:3.01:49,3,0	0/0:62,0:58:99:0,108,3573	1/1:9,13:21:12.04:182,12,0	1/1:5,0:13:6.02:91,6,0	1/1:14,0:18:2.99:24,3,0	1/1:11,13:24:21.04:379,21,0	1/1:17,0:18:48.06:726,48,0	1/1:18,0:19:32.46:369,32,0	1/1:11,0:13:36.06:561,36,0
chr10	6432733	.	G	GCA	2148.47	PASS	AB=0.803;AC=36;AF=0.783;AN=46;BaseQRankSum=0.005;DP=630;FS=9.295;HRun=0;HaplotypeScore=232.8009;InbreedingCoeff=0.1635;MQ=42.36;MQ0=8;MQRankSum=-0.483;QD=4.57;ReadPosRankSum=2.048;VQSLOD=1.5959;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:25:0:0,0,0	1/1:2,9:11:21.07:322,21,0	./.	./.	0/1:11,15:26:12.08:293,0,12	0/0:29,0:29:2.73:0,3,14	1/1:26,0:26:4.21:25,4,0	1/1:14,0:11:5.33:26,5,0	1/1:19,0:21:2.92:10,3,0	1/1:19,2:22:9.92:244,10,0	0/1:3,12:15:27.72:295,0,28	1/1:19,0:19:6.14:19,6,0	0/1:14,0:13:1.45:18,0,1	1/1:19,0:19:1.82:5,2,0	1/1:22,0:21:5.62:27,6,0	1/1:25,0:24:2.31:10,2,0	1/1:21,0:21:10.24:48,10,0	0/0:38,0:37:68.54:0,69,662	1/1:12,0:9:4.70:16,5,0	0/1:25,0:25:0:0,0,0	0/1:29,40:67:92.27:628,0,92	./.	./.	./.	1/1:23,0:24:2.98:22,3,0	1/1:19,0:19:2.30:83,2,0	1/1:20,0:20:5.25:78,5,0	1/1:17,0:16:18.04:99,18,0
chr10	6432744	.	C	CATGT	879.22	PASS	AB=0.955;AC=10;AF=0.185;AN=54;BaseQRankSum=6.984;DP=967;FS=0.611;HRun=0;HaplotypeScore=349.4753;InbreedingCoeff=0.0653;MQ=35.77;MQ0=19;MQRankSum=-7.600;QD=2.80;ReadPosRankSum=-4.626;VQSLOD=0.6606;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,1:32:3.35:0,3,61	0/0:13,0:13:29.98:0,30,344	0/0:22,0:3:6.02:0,6,111	./.	0/0:30,0:30:47.96:0,48,700	0/0:38,0:37:6.24:0,6,97	0/0:39,0:39:8.09:0,8,83	0/1:29,0:26:96.37:287,0,96	0/1:34,0:34:6.22:6,0,65	0/0:23,0:23:69.19:0,69,1129	0/0:18,0:18:35.98:0,36,398	0/1:38,3:41:36.61:37,0,67	0/1:39,2:40:8.52:82,0,9	1/1:37,2:39:2.22:13,2,0	0/0:28,0:27:5.54:0,6,28	0/0:39,0:38:16.94:0,17,242	0/0:26,0:25:15.87:0,16,161	0/0:36,0:35:99:0,105,2033	0/0:23,0:20:35.45:0,35,456	0/0:42,0:42:3.32:0,3,53	0/0:73,0:68:99:0,99,1333	0/0:63,0:61:9.01:0,9,133	0/0:33,0:33:0:0,0,0	0/1:30,4:34:0.03:0,0,1	0/0:44,0:43:12.01:0,12,176	0/1:38,1:39:99:228,0,120	0/1:28,4:32:1.81:237,0,2	0/1:25,0:24:52.85:116,0,53
chr10	6432749	.	A	ATG	1135.14	PASS	AB=0.949;AC=17;AF=0.304;AN=56;BaseQRankSum=9.356;DP=1040;FS=15.817;HRun=0;HaplotypeScore=300.0324;InbreedingCoeff=0.0203;MQ=35.24;MQ0=21;MQRankSum=-7.292;QD=2.16;ReadPosRankSum=2.633;VQSLOD=1.0522;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,6:28:3.01:0,3,44	0/0:14,0:14:18.22:0,18,191	0/0:32,0:3:6.02:0,6,94	0/0:37,0:1:3.01:0,3,41	0/0:31,0:31:40.26:0,40,475	0/0:39,0:38:3.17:0,3,30	0/1:42,0:42:11.62:17,0,12	0/1:29,1:27:99:115,0,472	1/1:39,0:39:4.04:28,4,0	0/0:24,0:24:63.88:0,64,819	0/0:18,0:18:24.70:0,25,258	0/1:41,0:41:30:30,0,49	0/1:41,2:42:31.09:89,0,31	1/1:41,0:41:2.94:24,3,0	1/1:32,0:31:5.61:32,6,0	0/1:40,0:39:6.43:6,0,34	0/1:34,0:33:22.77:69,0,23	0/0:38,0:37:99:0,107,1599	0/0:24,0:22:9.61:0,10,241	0/0:45,0:45:0.30:0,0,2	0/0:76,0:71:79.80:0,80,954	0/0:69,0:67:0.89:0,1,2	0/0:37,1:38:0:0,0,0	0/1:36,0:36:0.03:1,0,0	0/1:49,0:48:14.60:15,0,27	0/1:39,5:43:99:349,0,550	0/1:24,8:32:81.66:157,0,82	0/1:17,5:21:0.22:349,0,0
chr10	6432750	.	C	CATGT	2295.86	PASS	AB=0.979;AC=21;AF=0.375;AN=56;BaseQRankSum=10.374;DP=1061;FS=12.515;HRun=0;HaplotypeScore=311.4808;InbreedingCoeff=0.1780;MQ=35.08;MQ0=22;MQRankSum=-9.056;QD=4.10;ReadPosRankSum=0.839;VQSLOD=0.2569;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:30:0.29:0,0,2	0/0:14,0:14:33:0,33,401	0/0:36,0:3:9:0,9,139	0/0:39,0:1:3.01:0,3,49	0/0:31,0:31:47.96:0,48,704	0/0:39,0:38:5.04:0,5,18	1/1:42,0:42:5.99:37,6,0	0/1:32,1:29:99:183,0,388	1/1:39,0:39:2.33:112,2,0	0/0:24,0:24:69.19:0,69,1092	0/0:18,0:18:36.01:0,36,467	0/1:39,3:42:19.57:203,0,20	1/1:41,2:42:6.99:197,7,0	1/1:38,4:42:2.76:80,3,0	1/1:32,0:31:5.92:100,6,0	0/1:40,0:39:39.29:39,0,88	0/1:35,0:34:28.88:229,0,29	0/0:38,0:37:83.38:0,83,1909	0/1:23,1:22:99:104,0,167	0/0:43,2:45:0.31:0,0,2	0/0:78,0:73:99:0,105,1468	0/0:69,0:67:0.47:0,0,2	0/0:39,0:39:0:0,0,0	0/1:34,2:36:0.27:0,0,0	0/1:49,0:48:2.39:12,0,2	0/1:47,0:46:99:459,0,460	0/1:33,0:33:17.25:228,0,17	1/1:23,0:22:38.88:470,39,0
chr10	6432751	.	A	ATG	952.92	PASS	AB=0.997;AC=22;AF=0.393;AN=56;BaseQRankSum=10.759;DP=1061;FS=10.859;HRun=0;HaplotypeScore=304.2477;InbreedingCoeff=0.1609;MQ=34.83;MQ0=23;MQRankSum=-9.126;QD=1.58;ReadPosRankSum=1.646;VQSLOD=0.7020;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:31:0.47:0,0,2	0/0:14,0:14:20.07:0,20,195	0/0:36,0:3:9.03:0,9,127	0/0:43,0:1:3.01:0,3,40	0/0:30,0:30:33.78:0,34,431	0/0:39,0:38:3.07:0,3,32	0/1:43,0:43:11.52:12,0,17	0/1:33,0:29:37.57:38,0,396	1/1:37,1:38:6.74:54,7,0	0/0:23,0:23:65.08:0,65,798	0/0:18,0:18:24.70:0,25,258	1/1:43,0:43:1.03:80,1,0	1/1:42,0:41:8.52:101,9,0	1/1:38,0:38:2.85:26,3,0	1/1:31,1:31:5.88:48,6,0	0/1:41,0:40:6.30:6,0,85	0/1:35,1:35:33.65:91,0,34	0/0:37,0:36:62.43:0,62,1479	0/1:23,0:21:69.44:69,0,150	0/1:44,0:44:0.17:0,0,1	0/0:77,0:72:76.10:0,76,938	0/0:67,1:66:0:0,0,0	0/0:39,0:39:0:0,0,0	0/1:37,0:37:0.03:1,0,0	0/1:50,0:49:9.78:10,0,11	0/1:47,0:46:99:253,0,302	0/1:35,0:35:14.64:156,0,15	1/1:23,0:22:8.77:163,9,0
chr10	6432752	.	C	CATGT	2523.41	PASS	AB=0.971;AC=23;AF=0.411;AN=56;BaseQRankSum=10.609;DP=1074;FS=12.111;HRun=0;HaplotypeScore=315.7020;InbreedingCoeff=0.0722;MQ=34.71;MQ0=24;MQRankSum=-7.262;QD=3.85;ReadPosRankSum=0.968;VQSLOD=0.6778;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,2:31:0.29:0,0,1	0/0:14,0:14:33:0,33,402	0/0:38,0:3:9.03:0,9,156	0/0:43,0:1:3.01:0,3,58	0/0:30,0:30:48.06:0,48,703	1/1:35,2:38:0.76:19,1,0	1/1:42,2:44:7.40:108,7,0	0/1:35,0:30:88.53:89,0,544	1/1:36,2:38:3.05:178,3,0	0/0:22,0:22:66.19:0,66,1086	0/0:18,0:18:36.01:0,36,467	0/1:43,0:43:23.32:67,0,23	0/1:41,1:41:21.57:116,0,22	1/1:39,0:39:2.74:23,3,0	1/1:29,2:31:5.92:162,6,0	0/1:36,4:40:48.04:68,0,48	0/1:35,1:35:55.36:425,0,55	0/0:37,0:36:99:0,102,1923	0/1:26,0:24:99:296,0,161	0/1:44,1:45:0.16:0,0,1	0/0:77,0:72:99:0,108,1523	0/0:64,5:67:0:0,0,0	0/0:39,0:39:0:0,0,0	0/1:38,0:38:0.09:0,0,0	1/1:49,2:50:8.15:152,8,0	0/1:46,2:47:99:428,0,593	0/1:33,2:35:63.75:237,0,64	0/1:22,1:22:25.18:310,0,25
chr10	6432754	.	C	CATGT	1637.16	PASS	AB=0.996;AC=22;AF=0.393;AN=56;BaseQRankSum=11.210;DP=1101;FS=9.400;HRun=0;HaplotypeScore=322.9489;InbreedingCoeff=0.0687;MQ=34.33;MQ0=25;MQRankSum=-8.622;QD=2.45;ReadPosRankSum=-0.856;VQSLOD=0.8663;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:33,1:33:0.18:0,0,1	0/0:14,0:14:33.01:0,33,403	0/0:42,0:3:9.03:0,9,168	0/0:46,0:2:3.01:0,3,59	0/0:30,0:30:48.06:0,48,704	0/0:38,0:37:2.31:0,2,7	1/1:44,1:45:7.57:94,8,0	0/1:42,0:35:94.22:94,0,649	1/1:38,0:38:4.48:71,4,0	0/0:23,0:23:66.20:0,66,1095	0/0:18,0:18:36.01:0,36,466	0/1:44,0:44:93.15:156,0,93	0/1:43,0:42:53.82:54,0,104	1/1:41,0:41:2.50:17,3,0	1/1:30,0:29:5.92:81,6,0	0/1:40,0:39:23.53:24,0,35	0/1:35,0:34:20.77:218,0,21	0/0:36,0:35:99:0,102,1887	0/1:27,0:25:99:259,0,176	0/1:45,0:45:0.16:0,0,1	0/0:77,0:72:99:0,111,1616	0/0:68,1:67:0:0,0,0	0/0:41,0:41:0:0,0,0	0/1:39,0:39:0.09:0,0,0	1/1:50,0:49:5.16:98,5,0	0/1:52,1:52:99:374,0,745	0/1:38,0:38:47.79:48,0,199	0/1:23,0:22:75.84:200,0,76
chr10	6432756	.	C	CATGT	822.85	PASS	AB=0.986;AC=16;AF=0.286;AN=56;BaseQRankSum=6.211;DP=1124;FS=3.096;HRun=0;HaplotypeScore=330.2475;InbreedingCoeff=0.2333;MQ=34.05;MQ0=30;MQRankSum=-4.190;QD=1.77;ReadPosRankSum=-3.025;VQSLOD=1.6508;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:35,0:34:0.18:0,0,1	0/0:14,0:14:32.99:0,33,397	0/0:46,0:3:9.03:0,9,150	0/0:51,0:2:6.02:0,6,108	0/0:30,0:30:48.02:0,48,620	0/0:29,10:38:2.87:0,3,34	1/1:42,4:46:4.01:30,4,0	0/0:47,0:40:60.15:0,60,737	0/0:32,5:38:5.66:0,6,25	0/0:23,0:23:69.18:0,69,1098	0/0:18,0:18:36.01:0,36,466	0/1:45,0:45:33.72:34,0,114	0/1:44,0:43:0.45:0,0,129	1/1:42,0:42:1.95:8,2,0	1/1:25,7:31:0.49:14,0,0	0/0:28,11:38:4.10:0,4,40	0/1:34,2:35:29.37:114,0,29	0/0:36,0:35:96.33:0,96,1843	0/1:27,0:25:99:650,0,178	0/1:42,3:45:0.16:0,0,1	0/0:77,0:72:99:0,111,1620	0/0:54,15:67:0:0,0,0	0/0:41,0:41:0:0,0,0	0/1:39,0:39:0.09:0,0,0	1/1:43,7:49:1.50:51,2,0	0/0:53,0:52:75.85:0,76,1151	0/0:39,0:39:9.03:0,9,284	0/1:23,0:22:49.74:50,0,167
chr10	6432762	.	CATGT	C	1531.42	PASS	AB=0.983;AC=29;AF=0.518;AN=56;BaseQRankSum=7.365;DP=1135;FS=5.084;HRun=0;HaplotypeScore=310.3267;InbreedingCoeff=0.2306;MQ=33.46;MQ0=30;MQRankSum=-7.930;QD=1.93;ReadPosRankSum=-0.494;VQSLOD=1.8213;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:33,1:34:0.47:2,0,0	0/0:12,0:12:26.96:0,27,526	0/0:53,0:6:18.06:0,18,435	0/0:59,0:2:6.02:0,6,155	0/0:28,0:28:39.13:0,39,789	1/1:34,5:38:0.29:20,0,0	1/1:34,10:44:8.45:118,8,0	0/1:54,0:47:99:184,0,296	1/1:33,6:39:3.12:57,3,0	0/0:20,0:20:1.76:0,2,949	0/0:17,0:17:36.12:0,36,800	0/1:45,0:45:40.05:40,0,71	0/1:44,0:43:34.89:70,0,35	1/1:43,0:43:2.90:40,3,0	1/1:29,3:31:5.69:42,6,0	1/1:38,1:38:0.31:19,0,0	1/1:23,15:37:12.30:147,12,0	0/0:32,0:31:89.75:0,90,2090	1/1:25,2:25:9.79:301,10,0	0/0:41,4:45:0.97:0,1,4	0/0:76,0:72:99:0,108,2365	0/1:62,7:67:0:0,0,0	0/1:41,1:42:0:0,0,0	0/1:39,0:39:0.21:0,0,1	1/1:44,6:49:4.34:26,4,0	0/1:54,0:53:99:344,0,538	0/1:38,0:38:81.94:82,0,204	0/1:22,1:22:86.14:194,0,86
chr10	6432763	.	ATG	A	333.78	PASS	AB=0.988;AC=21;AF=0.375;AN=56;BaseQRankSum=6.291;DP=1127;FS=21.884;HRun=0;HaplotypeScore=302.8124;InbreedingCoeff=0.4317;MQ=33.31;MQ0=30;MQRankSum=-6.856;QD=0.60;ReadPosRankSum=-0.161;VQSLOD=0.8173;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:32,0:32:0.47:2,0,0	0/0:12,0:12:27.01:0,27,366	0/0:53,0:6:18.06:0,18,297	0/0:60,0:3:9.03:0,9,153	0/0:28,0:28:39.06:0,39,561	0/1:38,1:38:5.19:11,0,5	1/1:43,1:44:7.64:77,8,0	0/0:54,0:47:31.78:0,32,583	1/1:39,0:39:6.92:45,7,0	0/0:21,0:21:34.93:0,35,715	0/0:17,0:17:36.11:0,36,534	0/0:45,0:45:13.55:0,14,112	0/0:44,0:43:0.90:0,1,87	1/1:43,0:43:3.37:11,3,0	1/1:30,2:31:5.88:35,6,0	0/1:39,0:38:4.43:4,0,17	1/1:37,0:36:5.18:108,5,0	0/0:31,0:30:69.28:0,69,1292	0/1:26,1:25:99:141,0,117	0/0:43,2:45:0.52:0,1,4	0/0:72,0:68:99:0,108,1593	0/1:69,0:67:0:0,0,0	0/1:42,0:42:0:0,0,0	0/1:38,1:39:0:1,0,0	1/1:49,0:48:2.29:27,2,0	0/0:53,0:52:44.57:0,45,720	0/0:38,0:38:14:0,14,233	0/1:23,0:22:23.73:24,0,97
chr10	6432764	.	T	TAC	487.55	PASS	AB=0.977;AC=17;AF=0.340;AN=50;BaseQRankSum=4.902;DP=1114;FS=21.134;HRun=0;HaplotypeScore=298.5564;InbreedingCoeff=0.3651;MQ=33.16;MQ0=31;MQRankSum=-4.093;QD=1.03;ReadPosRankSum=0.044;VQSLOD=0.9959;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/0:12,0:12:11.45:0,11,96	0/0:53,0:6:18.02:0,18,251	0/0:59,0:3:9:0,9,118	0/0:27,0:27:25.85:0,26,249	0/1:37,2:38:5.75:9,0,6	0/1:43,1:44:1.94:50,0,2	0/0:54,0:47:84.22:0,84,720	1/1:37,2:39:9.90:113,10,0	0/0:19,0:19:29.44:0,29,479	0/0:17,0:17:17.32:0,17,246	0/1:45,0:45:5.21:5,0,92	0/0:43,0:42:14.77:0,15,106	1/1:42,0:42:3.45:24,3,0	1/1:31,1:31:5.93:67,6,0	0/1:35,2:36:22.97:38,0,23	0/1:37,0:36:6.24:210,0,6	0/0:31,0:30:87.26:0,87,1309	0/1:26,1:25:96.17:96,0,190	0/1:45,0:45:0.34:0,0,0	0/0:71,0:67:56.65:0,57,945	./.	./.	1/1:37,0:37:0.26:1,0,0	1/1:49,0:48:1.83:20,2,0	0/0:52,0:51:99:0,116,875	0/0:37,0:37:34.78:0,35,267	0/0:22,0:21:22.83:0,23,170
chr10	6432766	.	T	TAC	2075.27	PASS	AB=0.871;AC=22;AF=0.440;AN=50;BaseQRankSum=8.830;DP=1157;FS=12.698;HRun=0;HaplotypeScore=312.4328;InbreedingCoeff=0.1962;MQ=33.06;MQ0=30;MQRankSum=-7.660;QD=3.33;ReadPosRankSum=-1.755;VQSLOD=0.6455;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:12,0:12:20.93:0,21,245	0/0:54,0:6:18.06:0,18,238	0/0:61,0:4:9.03:0,9,113	0/0:28,0:28:29.18:0,29,357	0/0:43,0:42:0.57:0,1,7	1/1:49,0:49:7.37:72,7,0	0/1:46,9:48:99:380,0,351	1/1:40,0:40:9.88:117,10,0	0/0:19,0:19:51.11:0,51,636	0/0:17,0:17:21.99:0,22,407	0/1:34,11:45:76.97:135,0,77	0/1:36,9:44:24.82:137,0,25	1/1:38,4:42:2.68:47,3,0	1/1:33,0:32:3.48:51,3,0	1/1:38,0:37:3.01:46,3,0	1/1:37,0:36:17.68:276,18,0	0/0:30,0:30:75.12:0,75,944	0/1:26,0:37:37.23:361,0,37	0/1:46,0:46:0.36:0,0,0	0/0:72,0:68:99:0,102,1265	./.	./.	1/1:28,10:38:0.46:1,0,0	0/0:52,0:51:0.41:0,0,1	0/1:45,9:53:99:441,0,424	0/1:36,2:38:57.50:58,0,133	0/1:22,2:22:22.40:109,0,22
chr10	6432772	.	CAT	C	352.50	PASS	AB=0.919;AC=20;AF=0.385;AN=52;BaseQRankSum=8.224;DP=1149;FS=18.091;HRun=0;HaplotypeScore=301.5912;InbreedingCoeff=-0.0699;MQ=32.72;MQ0=27;MQRankSum=-3.067;QD=0.54;ReadPosRankSum=1.771;VQSLOD=1.1367;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:27,5:32:0.47:1,0,0	0/0:11,0:11:21.07:0,21,397	0/0:54,0:6:18.06:0,18,347	0/0:60,0:4:12.04:0,12,200	0/0:25,0:25:30.10:0,30,577	1/1:39,3:41:0.44:24,0,0	0/1:44,6:50:6.97:19,0,7	0/0:58,0:51:99:0,102,1549	0/1:33,8:41:3.92:49,0,4	0/0:17,0:17:51.17:0,51,948	0/0:17,0:17:36.12:0,36,694	0/1:44,0:44:13.20:13,0,170	0/1:39,5:44:18.34:18,0,163	0/1:38,4:41:14.71:34,0,15	1/1:33,3:35:3.37:17,3,0	0/1:36,6:41:19.14:19,0,19	0/1:33,3:36:88.76:105,0,89	0/0:28,0:28:75.10:0,75,1336	0/1:40,2:38:23.38:23,0,717	0/0:39,5:44:2.38:0,2,23	0/0:68,0:65:99:0,102,1914	./.	./.	0/1:36,1:38:0:0,0,0	1/1:45,8:52:0.23:0,0,0	0/1:53,3:55:35.09:35,0,1584	0/1:31,4:35:25.27:25,0,470	0/1:19,2:20:99:109,0,235
chr10	6432776	.	CATGT	C	447.96	PASS	AB=0.994;AC=18;AF=0.321;AN=56;BaseQRankSum=6.085;DP=1140;FS=6.996;HRun=0;HaplotypeScore=307.9133;InbreedingCoeff=0.0634;MQ=32.60;MQ0=27;MQRankSum=-4.167;QD=0.69;ReadPosRankSum=-1.295;VQSLOD=1.1567;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:32,0:32:0.47:2,0,0	0/0:11,0:11:19.22:0,19,443	0/0:54,0:6:18.06:0,18,418	0/0:60,0:4:12.04:0,12,324	0/0:23,0:23:30.10:0,30,766	0/1:42,1:43:0.36:12,0,0	1/1:49,1:50:5.41:38,5,0	0/0:57,0:50:99:0,105,1719	0/0:40,1:41:0.44:0,0,2	0/0:18,0:18:53.93:0,54,1298	0/0:17,0:17:36.12:0,36,942	0/1:44,0:44:12.95:13,0,154	0/1:44,0:44:1.35:1,0,174	0/1:43,0:42:19.74:20,0,41	0/0:35,0:34:2.06:0,2,17	0/1:42,0:41:26.11:26,0,63	0/1:36,1:37:70.74:71,0,185	0/0:27,0:27:72.76:0,73,1756	0/1:40,0:37:99:277,0,620	0/0:42,1:43:1.94:0,2,40	0/0:65,0:62:99:0,100,2513	0/1:69,2:69:0:0,0,0	0/1:41,0:41:0:0,0,0	0/0:36,0:36:0.41:0,0,2	1/1:51,2:52:3.93:24,4,0	0/1:57,0:56:28.22:28,0,1612	0/1:35,0:35:0.30:0,0,498	0/1:21,0:20:71.38:71,0,250
chr10	6432777	.	ATG	A	783.70	PASS	AB=0.883;AC=21;AF=0.375;AN=56;BaseQRankSum=7.566;DP=1132;FS=27.620;HRun=0;HaplotypeScore=292.3884;InbreedingCoeff=0.0400;MQ=32.59;MQ0=27;MQRankSum=-3.805;QD=1.09;ReadPosRankSum=0.773;VQSLOD=1.3339;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:32,0:32:0.47:2,0,0	0/0:10,0:10:18.45:0,18,309	0/0:54,0:6:18.06:0,18,294	0/0:60,0:4:12.04:0,12,227	0/0:23,0:23:30.10:0,30,536	1/1:27,15:42:4.12:74,4,0	0/1:37,13:50:5.71:36,0,6	0/0:58,0:51:78.82:0,79,961	0/1:21,20:41:20.27:89,0,20	0/0:18,0:18:53.86:0,54,917	0/0:17,0:17:36.12:0,36,632	0/1:44,0:44:4.82:5,0,11	0/1:42,1:43:5.23:5,0,54	0/1:43,0:42:18.45:18,0,24	1/1:22,13:34:5.93:50,6,0	0/1:24,16:39:20.85:60,0,21	0/1:25,11:36:85.70:202,0,86	0/0:27,0:27:45.14:0,45,1188	0/1:31,6:34:99:283,0,505	0/0:20,21:42:1.02:0,1,6	0/0:66,0:63:96.45:0,96,1680	0/1:42,29:69:0:0,0,0	0/1:40,0:41:0:0,0,0	0/0:35,1:36:0.24:0,0,1	1/1:28,25:52:5.33:30,5,0	0/1:56,1:56:21.44:21,0,855	0/1:35,0:35:3.99:4,0,287	0/1:21,0:20:52.23:52,0,188
chr10	6432778	.	TGTAC	T	444.96	PASS	AB=0.964;AC=22;AF=0.393;AN=56;BaseQRankSum=8.153;DP=1121;FS=7.191;HRun=0;HaplotypeScore=298.9788;InbreedingCoeff=0.0470;MQ=32.57;MQ0=28;MQRankSum=-5.215;QD=0.63;ReadPosRankSum=-0.300;VQSLOD=1.2376;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:28,3:31:0.47:2,0,0	0/0:10,0:10:18.38:0,18,387	0/0:54,0:6:18.06:0,18,357	0/0:60,0:4:12.04:0,12,332	0/0:23,0:23:29.93:0,30,704	1/1:42,0:42:1.77:51,2,0	1/1:50,0:50:0.25:30,0,0	0/0:57,0:50:99:0,101,1264	0/1:41,0:41:6.53:21,0,7	0/0:18,0:18:46.86:0,47,1203	0/0:17,0:17:36.12:0,36,796	0/0:44,0:44:1.68:0,2,92	0/1:39,4:43:8.48:8,0,93	0/1:40,3:42:24.64:25,0,32	1/1:33,0:33:2.02:16,2,0	0/1:39,0:38:29.14:51,0,29	0/1:35,0:35:55.11:55,0,137	0/0:27,0:27:65.81:0,66,1580	0/1:37,0:34:79.29:79,0,575	0/0:42,0:42:3.18:0,3,30	0/0:64,0:60:96.51:0,97,2336	0/1:69,0:67:0:0,0,0	0/1:39,2:41:0:0,0,0	0/1:34,1:35:0.21:0,0,1	1/1:52,0:52:5.29:18,5,0	0/1:57,1:57:53.05:53,0,1159	0/1:31,4:35:29.66:30,0,379	0/1:19,2:20:99:150,0,133
chr10	6432780	.	TAC	T	2101.86	PASS	AB=0.816;AC=26;AF=0.481;AN=54;BaseQRankSum=9.910;DP=1120;FS=26.491;HRun=0;HaplotypeScore=282.3375;InbreedingCoeff=0.1537;MQ=32.53;MQ0=27;MQRankSum=-8.628;QD=2.84;ReadPosRankSum=1.465;VQSLOD=1.1248;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:20,11:31:0.47:1,0,0	0/0:9,0:9:14.53:0,15,176	0/1:53,0:6:1.51:2,0,106	0/0:58,0:4:12.04:0,12,187	0/0:21,0:21:18.78:0,19,336	1/1:39,4:43:0.68:7,1,0	1/1:48,2:50:2.79:30,3,0	0/1:33,21:47:99:418,0,417	1/1:39,2:41:6.42:45,6,0	0/0:17,1:18:25.11:0,25,617	0/0:17,0:17:26.08:0,26,308	1/1:15,28:44:17.60:166,18,0	1/1:19,25:45:22.80:213,23,0	0/1:20,20:41:7.26:26,0,7	1/1:30,4:33:0.89:2,1,0	1/1:37,2:38:8.97:64,9,0	0/1:36,0:36:72.95:73,0,97	0/0:28,0:28:64.12:0,64,835	0/1:35,2:34:99:115,0,278	0/1:40,2:42:22.98:24,0,23	0/0:64,0:61:85.76:0,86,1154	./.	0/0:18,19:42:2.74:0,3,12	0/1:19,17:36:0:0,0,0	0/0:50,2:52:2.50:0,2,7	0/1:31,27:57:99:758,0,472	0/1:23,12:35:99:106,0,165	0/1:14,7:20:87.86:211,0,88
chr10	6432786	.	CACACAT	C	1356.94	PASS	AB=0.997;AC=29;AF=0.518;AN=56;BaseQRankSum=4.689;DP=1127;FS=43.629;HRun=0;HaplotypeScore=312.7606;InbreedingCoeff=-0.2474;MQ=32.83;MQ0=27;MQRankSum=-4.709;QD=1.56;ReadPosRankSum=-0.245;VQSLOD=1.2066;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:32,0:32:0.45:1,0,0	0/1:10,0:10:61.54:84,0,62	0/1:43,0:5:14.95:15,0,45	0/0:50,0:4:11.80:0,12,87	0/0:20,0:20:14.11:0,14,168	0/0:45,1:45:2.61:0,3,10	1/1:48,1:49:2.46:16,2,0	0/1:54,0:47:99:130,0,214	1/1:39,1:40:10.33:48,10,0	0/1:20,0:20:99:99,0,212	0/1:17,0:17:37.73:38,0,64	1/1:45,0:45:14.86:70,15,0	0/1:45,0:45:32.54:48,0,33	1/1:42,0:41:4.41:55,4,0	0/0:32,2:33:0:0,0,0	0/1:40,0:40:14.79:24,0,15	0/1:37,1:38:99:114,0,116	0/1:31,0:31:99:193,0,383	0/1:37,0:34:88.85:89,0,228	0/1:44,1:44:6.36:6,0,24	0/1:70,0:67:1.86:2,0,455	0/0:69,0:67:0:0,0,0	1/1:44,0:43:3.01:31,3,0	0/0:36,0:36:0.21:0,0,0	1/1:50,2:53:5.77:75,6,0	0/1:59,0:58:99:251,0,489	0/1:36,0:36:61.22:61,0,151	0/1:22,0:21:53.76:54,0,179
chr10	6432788	.	C	CAT	1028.82	PASS	AB=0.998;AC=25;AF=0.446;AN=56;BaseQRankSum=10.793;DP=1122;FS=41.874;HRun=0;HaplotypeScore=308.2193;InbreedingCoeff=0.0429;MQ=33.07;MQ0=28;MQRankSum=-8.540;QD=1.36;ReadPosRankSum=0.643;VQSLOD=1.3221;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:32,0:32:0.02:0,0,0	0/0:11,0:11:0.97:0,1,224	0/0:40,0:4:11.60:0,12,123	0/0:47,0:4:12.04:0,12,184	0/0:19,0:20:29.87:0,30,401	1/1:47,0:45:2.85:11,3,0	1/1:48,0:48:1.59:13,2,0	0/1:51,0:44:99:165,0,482	0/1:39,0:39:10.09:51,0,10	0/0:20,0:20:46.21:0,46,729	0/0:19,0:19:30.05:0,30,377	1/1:44,1:45:17.53:111,18,0	1/1:45,1:46:21.82:110,22,0	0/1:43,0:42:11.67:12,0,34	1/1:33,0:32:2.87:15,3,0	0/1:37,0:39:24.04:38,0,24	0/1:39,0:38:75.49:75,0,117	0/0:31,0:31:77.92:0,78,1053	0/1:36,0:33:96.28:96,0,456	1/1:44,0:43:0.43:8,0,0	0/0:70,0:67:92.79:0,93,1292	0/0:69,0:68:1.25:0,1,4	1/1:42,0:43:2.84:14,3,0	0/0:35,1:36:0:0,0,1	0/1:55,0:55:13.27:13,0,20	0/1:59,0:58:99:305,0,632	0/1:35,1:36:37.02:37,0,212	0/1:22,0:21:99:112,0,121
chr10	6432791	.	A	ATG	102.75	PASS	AB=0.994;AC=12;AF=0.214;AN=56;BaseQRankSum=5.431;DP=1089;FS=14.990;HRun=0;HaplotypeScore=298.9680;InbreedingCoeff=0.1413;MQ=33.56;MQ0=21;MQRankSum=-2.583;QD=0.26;ReadPosRankSum=-0.319;VQSLOD=0.8053;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:32,0:32:0.02:0,0,1	0/0:12,0:12:10.90:0,11,258	0/0:32,0:4:9.03:0,9,123	0/0:35,0:4:12.04:0,12,180	0/0:20,0:20:26.90:0,27,361	0/0:47,1:46:3.14:0,3,35	1/1:46,1:47:2.15:14,2,0	0/0:44,0:39:77.36:0,77,806	0/0:38,1:39:5.68:0,6,42	0/0:21,0:21:54.07:0,54,674	0/0:18,0:18:27.08:0,27,364	0/1:42,1:43:7.30:7,0,26	0/0:46,0:46:2.04:0,2,133	0/1:42,0:41:23.30:23,0,24	0/1:33,0:32:0.11:0,0,0	0/0:39,0:39:4.84:0,5,47	0/1:38,1:38:72.80:73,0,131	0/0:31,0:31:45.95:0,46,958	0/1:34,0:30:28.24:28,0,514	0/1:42,0:41:1.35:53,0,1	0/0:70,0:67:89.81:0,90,1255	0/0:68,1:67:3.01:0,3,34	1/1:43,0:42:2.68:26,3,0	0/0:34,1:35:3.01:0,3,37	0/0:51,1:52:8.51:0,9,77	0/0:59,1:59:48.17:0,48,975	0/1:36,0:36:3.77:4,0,277	0/0:23,0:22:18.64:0,19,259
chr10	6432792	.	TACACAC	T	1122.42	PASS	AB=0.955;AC=20;AF=0.417;AN=48;BaseQRankSum=-4.405;DP=1092;FS=1.784;HRun=0;HaplotypeScore=315.9228;InbreedingCoeff=-0.0947;MQ=33.68;MQ0=19;MQRankSum=1.124;QD=1.73;ReadPosRankSum=-0.435;VQSLOD=2.0906;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:30,2:32:3.46:49,3,0	1/1:11,1:12:14.62:163,15,0	./.	./.	0/0:17,1:19:2.50:0,2,9	0/1:49,0:47:0.28:0,0,1	0/0:46,0:46:0.17:0,0,1	./.	0/0:39,0:39:3.56:0,4,19	1/1:14,8:22:11.25:201,11,0	0/1:17,0:18:8.92:133,0,9	0/0:41,1:43:2.29:0,2,7	0/1:45,1:46:17.02:17,0,80	0/1:38,4:42:1.31:56,0,1	./.	0/0:38,0:38:6.45:0,6,66	0/1:39,0:38:35.34:35,0,116	0/1:30,3:34:76.44:306,0,76	0/0:34,0:30:11.97:0,12,55	0/0:45,0:44:2.85:0,3,38	0/1:70,0:67:36.23:61,0,36	0/1:69,0:67:0.09:0,0,0	1/1:41,2:42:2.97:20,3,0	0/0:34,1:36:2.85:0,3,29	0/1:53,0:53:20.21:30,0,20	0/1:58,2:59:70.46:70,0,402	0/1:32,2:36:60.37:60,0,134	0/1:19,4:22:50.90:51,0,155
chr10	6432794	.	C	CATGT	711.07	PASS	AB=0.963;AC=14;AF=0.250;AN=56;BaseQRankSum=8.224;DP=1086;FS=16.365;HRun=0;HaplotypeScore=322.7834;InbreedingCoeff=-0.0640;MQ=33.78;MQ0=18;MQRankSum=-4.145;QD=1.51;ReadPosRankSum=-2.796;VQSLOD=0.5826;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:2.15:0,2,30	0/0:12,0:12:26.27:0,26,432	0/0:28,0:3:9.03:0,9,177	0/0:32,0:4:12.04:0,12,236	0/0:19,0:19:23.84:0,24,427	0/1:48,3:49:11.30:11,0,41	1/1:43,2:45:1.73:35,2,0	0/0:42,0:37:75.52:0,76,1110	0/1:35,5:40:38.97:39,0,41	0/0:21,0:21:50.71:0,51,906	0/0:18,0:18:30.09:0,30,537	0/0:43,0:43:11.37:0,11,79	0/1:47,0:47:43.66:44,0,233	0/1:43,0:42:19.90:20,0,32	1/1:28,5:32:2.90:40,3,0	0/1:33,5:38:44.02:44,0,83	0/1:37,1:37:99:210,0,239	0/0:34,0:34:80.71:0,81,1377	0/1:31,0:27:99:305,0,556	0/1:42,3:44:0.76:1,0,3	0/0:72,0:68:92.92:0,93,1630	0/0:60,9:67:3.01:0,3,50	0/0:43,0:42:1.55:0,2,5	0/0:36,0:36:2.65:0,3,34	0/0:45,8:53:11.96:0,12,167	0/0:60,0:59:23.34:0,23,1214	0/1:36,0:36:97.70:98,0,385	0/1:23,0:22:8.48:8,0,276
chr10	6432795	.	A	ATG	143.86	PASS	AB=0.972;AC=8;AF=0.143;AN=56;BaseQRankSum=6.383;DP=1057;FS=24.553;HRun=0;HaplotypeScore=286.7573;InbreedingCoeff=0.0973;MQ=33.93;MQ0=18;MQRankSum=-2.775;QD=0.65;ReadPosRankSum=-0.976;VQSLOD=1.1609;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:3.44:0,3,25	0/0:12,0:12:26.58:0,27,324	0/0:27,0:3:9.03:0,9,140	0/0:29,0:4:12.04:0,12,189	0/0:18,0:18:24.02:0,24,338	0/0:45,1:44:6.02:0,6,53	1/1:44,0:44:1.62:17,2,0	0/0:42,0:37:76.96:0,77,987	0/1:38,1:39:22.65:23,0,44	0/0:21,0:21:51.08:0,51,705	0/0:18,0:18:30.10:0,30,440	0/0:43,0:43:12.48:0,12,128	0/0:47,0:47:16.42:0,16,245	0/0:43,0:42:0.40:0,0,36	1/1:30,2:31:2.88:22,3,0	0/1:38,0:38:22.51:23,0,58	0/1:36,1:36:67.69:68,0,245	0/0:33,0:33:91.34:0,91,1072	0/1:29,2:27:99:115,0,460	0/0:42,1:42:5.60:0,6,65	0/0:69,0:65:92.64:0,93,1304	0/0:63,3:64:2.98:0,3,45	0/0:42,0:41:2.99:0,3,24	0/0:38,0:37:2.99:0,3,40	0/0:45,5:50:11.53:0,12,147	0/0:61,0:60:99:0,122,1342	0/0:34,0:34:14.77:0,15,355	0/0:21,0:20:37.63:0,38,362
chr10	6432805	.	A	ATG	1449.78	PASS	AB=0.955;AC=12;AF=0.214;AN=56;BaseQRankSum=10.668;DP=964;FS=6.698;HRun=0;HaplotypeScore=256.1342;InbreedingCoeff=-0.2987;MQ=35.20;MQ0=16;MQRankSum=-7.932;QD=3.44;ReadPosRankSum=6.894;VQSLOD=0.7897;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:23.98:0,24,335	0/0:12,0:12:26.55:0,27,331	0/1:14,0:3:2.94:3,0,83	0/0:19,0:4:12.04:0,12,176	0/0:17,0:17:15.03:0,15,216	0/1:43,0:41:0.28:0,0,62	0/0:36,0:36:6.12:0,6,73	0/1:19,0:18:38.96:39,0,478	0/0:36,0:36:13.29:0,13,92	0/0:23,0:23:57.08:0,57,768	0/0:16,0:16:24.08:0,24,354	0/1:27,13:40:96.62:97,0,148	0/1:38,6:45:70.68:71,0,229	0/1:36,5:40:12.58:13,0,99	0/0:30,0:29:3.01:0,3,46	0/0:38,1:39:1.32:0,1,268	0/1:35,0:34:19.20:19,0,255	0/0:31,0:31:83.92:0,84,1051	0/1:26,0:24:99:134,0,404	0/1:43,0:42:26.71:27,0,69	0/0:69,0:65:83.48:0,83,1234	0/0:58,0:56:5.99:0,6,90	0/0:33,6:38:2.99:0,3,24	0/0:30,5:34:9.01:0,9,135	0/0:52,0:52:14.26:0,14,193	0/1:60,0:60:99:812,0,552	0/1:32,1:34:99:153,0,201	0/1:21,0:20:99:221,0,196
chr10	6433189	.	TG	T	19944.32	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=18.234;DP=815;FS=2.446;HRun=1;HaplotypeScore=185.4735;InbreedingCoeff=0.9977;MQ=86.06;MQ0=0;MQRankSum=-5.146;QD=33.46;ReadPosRankSum=3.608;VQSLOD=4.5496;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,59:62:99:1843,153,0	0/0:7,0:7:21.07:0,21,327	0/0:29,0:29:72.24:0,72,1054	0/0:30,0:30:61.07:0,61,1078	0/0:30,0:30:78.20:0,78,1216	1/1:0,30:30:87.27:1061,87,0	1/1:0,51:51:99:1869,153,0	1/1:1,28:29:80.27:963,80,0	1/1:2,27:29:81.90:1025,82,0	0/0:24,0:24:69.23:0,69,1074	0/0:23,0:23:69.24:0,69,1099	1/1:1,33:34:95.28:1155,95,0	1/1:3,21:24:67.50:828,68,0	1/1:0,31:31:87.27:1061,87,0	1/1:0,30:30:84.26:1037,84,0	1/1:0,31:31:90.28:1120,90,0	1/1:1,40:41:99:1346,110,0	0/0:22,0:22:63.21:0,63,1007	1/1:1,26:27:77.24:921,77,0	1/1:0,25:25:63.93:789,64,0	0/0:54,0:54:99:0,163,2551	1/1:0,32:32:90.28:1119,90,0	1/1:2,21:23:63.05:713,63,0	1/1:1,21:22:55.01:653,55,0	1/1:0,20:20:48.15:587,48,0	1/1:1,21:22:18.23:721,18,0	1/1:0,25:25:69.21:850,69,0	1/1:1,7:8:24.05:283,24,0
chr10	6433616	.	TCTGGAATC	T	13170.85	PASS	AB=0.519;AC=19;AF=0.339;AN=56;BaseQRankSum=16.554;DP=690;FS=1.884;HRun=0;HaplotypeScore=191.1824;InbreedingCoeff=0.9190;MQ=89.29;MQ0=0;MQRankSum=-16.148;QD=60.14;ReadPosRankSum=0.674;VQSLOD=4.9647;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,27:29:51.17:1297,51,0	0/0:14,0:14:42.14:0,42,1871	0/0:31,0:31:78.37:0,78,3475	0/0:31,0:31:87.29:0,87,3661	0/0:26,0:26:78.27:0,78,3332	0/0:23,0:23:69.24:0,69,2885	0/0:24,0:24:69.22:0,69,2869	1/1:5,16:20:48.15:1183,48,0	0/0:22,0:22:63.22:0,63,2705	0/0:31,0:31:84.29:0,84,3509	0/0:27,0:27:78.27:0,78,3367	1/1:2,22:24:57.20:1602,57,0	1/1:2,18:20:42:1204,42,0	1/1:1,19:20:45.15:1257,45,0	0/0:43,0:42:99:0,126,5330	0/0:26,0:26:75.26:0,75,3256	0/0:26,0:26:72.23:0,72,2945	0/0:21,0:21:60.21:0,60,2619	0/0:22,0:22:63.20:0,63,2543	0/0:40,0:40:99:0,114,5066	0/0:19,0:19:57.20:0,57,2546	0/0:24,0:24:72.21:0,72,3082	1/1:2,20:22:50.87:1415,51,0	1/1:2,13:15:17.97:446,18,0	0/0:21,0:21:63.22:0,63,2789	0/1:2,26:28:99:1903,0,192	1/1:1,29:30:72.25:2032,72,0	1/1:0,10:10:30.10:830,30,0
chr10	6434151	.	C	CCA	21147.71	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=16.675;DP=640;FS=2.261;HRun=0;HaplotypeScore=174.1675;InbreedingCoeff=0.9993;MQ=82.47;MQ0=0;MQRankSum=-11.213;QD=47.85;ReadPosRankSum=0.452;VQSLOD=4.6196;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,32:41:99:1888,105,0	0/0:16,0:16:48.16:0,48,707	0/0:19,0:19:54.15:0,54,739	0/0:28,0:29:72.11:0,72,919	0/0:33,0:33:96.30:0,96,1374	1/1:2,20:22:60.20:1100,60,0	1/1:6,13:19:45.15:816,45,0	1/1:5,24:30:81.20:1336,81,0	1/1:3,14:17:48.16:859,48,0	0/0:37,0:37:99:0,108,1538	0/0:18,0:18:54.18:0,54,794	1/1:2,7:9:27.04:468,27,0	1/1:0,15:15:45.15:842,45,0	1/1:2,22:24:60.17:1088,60,0	1/1:3,22:25:72.25:1337,72,0	1/1:0,22:23:63.22:1176,63,0	1/1:4,8:12:24.08:429,24,0	0/0:24,0:24:69.23:0,69,1011	1/1:7,13:21:51.13:870,51,0	1/1:2,15:17:48.16:874,48,0	0/0:22,0:22:63.20:0,63,910	1/1:3,21:27:60.20:1100,60,0	1/1:4,12:16:42.06:718,42,0	1/1:1,29:30:83.95:1549,84,0	1/1:0,15:15:33.11:616,33,0	1/1:5,31:36:58.16:1789,58,0	1/1:3,29:32:93.32:1731,93,0	1/1:0,10:10:30.10:561,30,0
chr10	6435238	.	CCTT	C	7909.32	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=8.389;DP=549;FS=40.592;HRun=0;HaplotypeScore=148.1888;InbreedingCoeff=0.9589;MQ=74.85;MQ0=2;MQRankSum=-8.076;QD=44.19;ReadPosRankSum=0.922;VQSLOD=3.7319;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:39:96.32:0,96,2143	0/0:6,0:6:18.03:0,18,368	0/0:24,0:24:63.21:0,63,1447	0/0:19,0:19:48.99:0,49,1042	0/0:25,0:25:60.19:0,60,1318	1/1:0,20:20:60.21:1022,60,0	1/1:0,24:24:60.21:1022,60,0	0/0:34,0:34:99:0,99,2230	1/1:0,13:13:39.13:657,39,0	0/0:20,0:20:57.18:0,57,1228	0/0:10,0:10:30.09:0,30,647	0/0:17,0:17:33.07:0,33,705	0/0:14,0:14:39.13:0,39,894	0/0:14,0:14:42.10:0,42,917	1/1:1,16:17:48.16:818,48,0	1/1:0,10:10:30.10:498,30,0	1/1:1,18:19:39.13:665,39,0	0/0:21,1:21:0.01:0,0,1006	1/1:1,20:21:45.11:721,45,0	1/1:0,21:21:57.20:971,57,0	0/0:21,0:20:48.12:0,48,1033	1/1:1,12:13:30.10:508,30,0	0/0:16,0:16:35.47:0,35,973	0/0:36,0:36:57.05:0,57,1097	1/1:0,21:21:60.20:1027,60,0	0/0:27,0:27:78.27:0,78,1756	0/0:17,0:17:51.17:0,51,1128	0/0:6,0:6:18.03:0,18,322
chr10	6435278	.	G	GGCGCGCGC	15840.02	PASS	AB=1.000;AC=43;AF=0.768;AN=56;BaseQRankSum=7.034;DP=507;FS=16.662;HRun=0;HaplotypeScore=227.8044;InbreedingCoeff=0.5617;MQ=57.47;MQ0=4;MQRankSum=-7.974;QD=35.60;ReadPosRankSum=2.202;VQSLOD=3.3236;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:32:27.64:458,28,0	0/0:3,0:3:4.26:0,4,85	0/0:24,0:17:33.11:0,33,742	0/0:17,0:14:26.44:0,26,589	0/1:21,0:21:91.16:91,0,321	1/1:13,4:18:18.06:586,18,0	1/1:18,6:25:45.15:1500,45,0	1/1:17,0:17:38.10:460,38,0	1/1:6,10:16:36.12:1347,36,0	0/1:10,0:9:9.67:10,0,335	0/0:8,0:8:2.87:0,3,82	1/1:11,0:17:9.03:275,9,0	1/1:7,0:19:36.12:859,36,0	1/1:4,0:16:23.57:707,24,0	1/1:11,7:18:36.12:1166,36,0	1/1:6,7:13:23.06:835,23,0	1/1:11,12:23:32.95:1198,33,0	0/1:18,0:17:99:138,0,123	1/1:13,4:17:27.01:689,27,0	1/1:20,11:31:27.09:1066,27,0	0/0:10,0:9:9.03:0,9,213	1/1:10,11:22:30.10:1115,30,0	1/1:9,0:14:11.84:209,12,0	1/1:9,0:28:2.35:85,2,0	1/1:14,16:32:52.95:1810,53,0	1/1:12,0:18:41.17:622,41,0	1/1:6,0:13:21.25:477,21,0	1/1:1,0:2:6.02:134,6,0
chr10	6435279	.	G	GCGCA	8271.02	PASS	AB=1.000;AC=39;AF=0.696;AN=56;BaseQRankSum=8.383;DP=533;FS=17.774;HRun=0;HaplotypeScore=245.1346;InbreedingCoeff=0.6090;MQ=56.55;MQ0=5;MQRankSum=-8.308;QD=18.63;ReadPosRankSum=3.885;VQSLOD=3.1662;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:34,1:32:32.33:443,32,0	0/0:2,0:2:5.51:0,6,66	0/0:25,0:17:31.18:0,31,522	0/0:18,0:14:30.40:0,30,481	0/1:21,0:21:48.45:48,0,232	1/1:17,0:17:18.05:262,18,0	1/1:25,0:25:40.60:514,41,0	1/1:22,1:22:55.14:832,55,0	1/1:15,0:15:35.79:398,36,0	0/0:9,0:8:11.83:0,12,255	0/0:8,0:8:5.75:0,6,77	1/1:11,7:17:8.95:198,9,0	1/1:19,0:19:36.12:725,36,0	1/1:24,0:24:23.92:523,24,0	1/1:18,0:18:36.06:413,36,0	1/1:13,0:13:0.74:227,1,0	1/1:23,0:23:31.63:380,32,0	0/0:17,0:16:8.20:0,8,150	0/1:17,0:17:10.28:186,0,10	0/1:31,0:31:16.81:305,0,17	0/0:10,0:9:9.03:0,9,170	1/1:23,0:23:30:360,30,0	1/1:19,0:19:17.71:257,18,0	1/1:26,0:26:5.63:80,6,0	1/1:32,0:32:29.98:574,30,0	1/1:30,0:30:61.17:952,61,0	1/1:12,1:13:25.62:488,26,0	1/1:2,0:2:6.02:105,6,0
chr10	6435283	.	G	GCACACACACACA	15458.84	PASS	AB=0.932;AC=46;AF=0.821;AN=56;BaseQRankSum=2.735;DP=620;FS=3.239;HRun=0;HaplotypeScore=336.8960;InbreedingCoeff=0.0958;MQ=49.65;MQ0=5;MQRankSum=-4.386;QD=26.38;ReadPosRankSum=5.997;VQSLOD=2.4350;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:46,0:43:27.94:991,28,0	1/1:4,0:4:3.01:175,3,0	0/1:26,0:17:25.84:26,0,286	0/0:19,0:14:1.95:0,2,134	1/1:13,9:29:7.75:408,8,0	0/1:18,0:18:19.99:201,0,20	0/1:27,0:27:17.94:330,0,18	1/1:18,0:17:30.03:826,30,0	1/1:18,0:18:1.06:366,1,0	1/1:14,6:20:39.97:1479,40,0	0/1:4,6:10:0:0,0,0	1/1:26,0:25:15.05:643,15,0	1/1:20,0:20:30.10:1300,30,0	1/1:25,0:25:23.86:1096,24,0	1/1:19,0:19:26.96:260,27,0	0/1:13,0:13:33.38:255,0,33	1/1:24,0:24:33.02:422,33,0	1/1:11,6:22:18.14:1194,18,0	1/1:22,0:22:8.38:216,8,0	1/1:32,0:32:26.93:273,27,0	0/0:14,0:12:0.47:0,0,1	0/1:23,0:23:9.46:317,0,9	1/1:19,0:19:6.30:276,6,0	1/1:28,0:28:6.16:278,6,0	1/1:33,0:33:30.19:450,30,0	1/1:30,0:29:49.15:1313,49,0	1/1:24,0:24:41.81:1834,42,0	1/1:7,0:7:12.93:531,13,0
chr10	6435304	.	CCCCA	C	5095.41	PASS	AB=0.878;AC=35;AF=0.625;AN=56;BaseQRankSum=6.677;DP=609;FS=5.621;HRun=0;HaplotypeScore=259.3784;InbreedingCoeff=0.5733;MQ=54.62;MQ0=6;MQRankSum=-3.946;QD=11.30;ReadPosRankSum=2.736;VQSLOD=3.9311;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:28,3:42:13.01:453,13,0	0/0:3,0:4:8.27:0,8,114	0/0:35,0:24:69.14:0,69,1596	0/0:31,0:24:16.56:0,17,1130	0/0:23,0:23:29.52:0,30,465	1/1:16,2:18:24.22:222,24,0	1/1:15,6:21:30.92:246,31,0	1/1:1,27:29:50.07:1171,50,0	1/1:22,0:22:20.55:190,21,0	0/0:22,0:21:57.20:0,57,1497	0/0:9,0:9:24.08:0,24,592	0/1:15,0:22:1.43:226,0,1	0/1:8,0:20:1.01:189,0,1	1/1:1,15:28:4.75:95,5,0	1/1:14,1:15:26.84:177,27,0	1/1:10,0:10:16.68:107,17,0	1/1:17,2:20:12.97:182,13,0	0/0:20,0:19:4.15:0,4,809	0/1:17,4:21:49.42:324,0,49	1/1:21,13:34:38.95:197,39,0	0/0:9,0:12:11.56:0,12,262	0/1:24,1:25:17.13:99,0,17	1/1:1,10:16:5.12:43,5,0	1/1:18,1:23:5.24:79,5,0	1/1:26,1:27:41.14:238,41,0	0/1:2,16:22:38.79:339,0,39	1/1:16,1:25:13.60:387,14,0	1/1:5,0:6:13.71:129,14,0
chr10	6435306	.	CCA	C	4883.27	PASS	AB=0.673;AC=38;AF=0.679;AN=56;BaseQRankSum=7.529;DP=612;FS=2.055;HRun=0;HaplotypeScore=250.1828;InbreedingCoeff=0.7178;MQ=55.45;MQ0=6;MQRankSum=-7.763;QD=10.78;ReadPosRankSum=4.039;VQSLOD=4.4571;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:44,0:43:23.65:343,24,0	0/0:4,0:4:5.81:0,6,64	0/0:35,0:24:71.71:0,72,1094	0/0:31,0:24:6.45:0,6,695	0/0:24,0:24:31.41:0,31,363	1/1:9,11:20:32.82:303,33,0	1/1:11,11:22:23.41:241,23,0	1/1:30,0:29:43.03:717,43,0	1/1:5,17:22:29.76:270,30,0	0/0:22,0:21:57.19:0,57,971	0/0:9,0:9:24.06:0,24,387	1/1:23,0:22:20.62:225,21,0	1/1:20,0:20:23.20:171,23,0	1/1:28,0:28:13.77:78,14,0	1/1:3,12:15:29.82:237,30,0	1/1:3,7:10:19.12:159,19,0	1/1:6,13:19:19.09:228,19,0	0/0:20,1:20:1.69:0,2,546	0/1:15,5:21:12.97:260,0,13	1/1:17,17:34:41.63:305,42,0	0/0:13,0:11:14.66:0,15,203	0/1:6,19:25:16.84:168,0,17	1/1:16,0:16:4.51:24,5,0	1/1:24,0:23:4.75:41,5,0	1/1:11,16:27:34.87:352,35,0	1/1:22,0:21:16.24:300,16,0	1/1:25,0:25:34.95:326,35,0	1/1:6,0:6:14.92:137,15,0
chr10	6435308	.	A	ACACACACAC	11239.18	PASS	AB=1.000;AC=40;AF=0.714;AN=56;BaseQRankSum=9.694;DP=641;FS=0.944;HRun=0;HaplotypeScore=299.7534;InbreedingCoeff=0.4255;MQ=56.00;MQ0=6;MQRankSum=-9.085;QD=21.29;ReadPosRankSum=0.945;VQSLOD=3.4492;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:43,1:45:65.13:1019,65,0	0/1:5,0:5:39.77:40,0,97	0/0:35,0:25:69.22:0,69,1766	0/0:32,0:25:26.38:0,26,1288	0/1:24,0:24:99:99,0,292	1/1:22,0:22:6.33:379,6,0	1/1:27,0:27:19.67:409,20,0	1/1:32,0:31:78.42:975,78,0	1/1:23,0:23:10.99:438,11,0	0/0:23,0:22:15.76:0,16,1508	0/0:10,0:10:23.93:0,24,626	1/1:18,2:22:22.40:615,22,0	1/1:12,6:20:35.32:1081,35,0	1/1:20,6:28:25.69:961,26,0	1/1:16,0:16:32.33:432,32,0	0/1:11,0:10:9.42:299,0,9	1/1:20,0:20:34.82:511,35,0	0/1:22,0:21:99:133,0,552	0/1:22,0:22:12.94:351,0,13	1/1:34,0:34:41.82:562,42,0	0/0:13,0:11:15.87:0,16,309	1/1:27,0:27:0.83:448,1,0	1/1:13,1:16:11.11:397,11,0	1/1:24,1:24:5.16:174,5,0	1/1:28,0:28:33.65:611,34,0	0/1:22,0:21:4.08:327,0,4	1/1:22,1:26:30.72:730,31,0	1/1:5,0:6:13.66:248,14,0
chr10	6435477	.	AT	A	9838.57	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-12.019;DP=664;FS=2.529;HRun=9;HaplotypeScore=98.8081;InbreedingCoeff=0.9575;MQ=82.80;MQ0=3;MQRankSum=-5.719;QD=21.72;ReadPosRankSum=5.447;VQSLOD=4.8653;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,29:31:81.03:741,81,0	0/0:1,0:9:19.89:0,20,101	0/0:34,1:29:18.60:0,19,501	0/0:43,1:33:13.32:0,13,428	0/0:7,0:34:85.76:0,86,461	1/1:3,23:26:66.03:604,66,0	1/1:1,17:18:39.02:357,39,0	1/1:5,20:25:35.40:479,35,0	1/1:2,24:26:60.03:549,60,0	0/0:4,0:32:82.83:0,83,438	0/0:4,0:14:28.52:0,29,149	1/1:4,12:15:1.40:267,1,0	1/1:2,17:19:41.93:384,42,0	1/1:2,18:20:54.02:493,54,0	1/1:4,24:28:63.03:576,63,0	1/1:2,16:18:39.02:357,39,0	1/1:2,32:34:81.04:741,81,0	0/0:1,0:16:39.89:0,40,207	1/1:4,16:20:50.98:459,51,0	1/1:1,25:27:71.07:637,71,0	0/0:5,0:25:45.78:0,46,262	1/1:0,10:10:30.02:274,30,0	1/1:1,12:13:30.01:274,30,0	1/1:1,26:27:63.03:577,63,0	1/1:1,25:26:54.03:494,54,0	1/1:2,22:25:51.25:533,51,0	1/1:2,26:28:66.03:602,66,0	1/1:0,16:16:48.03:439,48,0
chr10	6435667	.	CT	C	9754.09	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=9.657;DP=751;FS=0.575;HRun=2;HaplotypeScore=133.3325;InbreedingCoeff=0.9852;MQ=71.01;MQ0=0;MQRankSum=-0.982;QD=35.99;ReadPosRankSum=2.936;VQSLOD=4.3865;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,48:48:99:1790,138,0	0/0:12,0:12:36.12:0,36,537	0/0:22,0:22:60.20:0,60,875	0/0:18,0:17:48.09:0,48,618	0/0:27,0:27:78.25:0,78,1150	0/0:24,0:24:69.22:0,69,1013	0/0:26,0:26:72.21:0,72,1020	1/1:0,38:38:99:1374,108,0	0/0:28,0:28:84.28:0,84,1259	0/0:34,0:34:99:0,102,1484	0/0:30,0:30:90.23:0,90,1283	1/1:0,27:27:78.25:1013,78,0	1/1:0,23:23:63.20:818,63,0	1/1:0,16:16:45.15:584,45,0	0/0:32,0:32:90.30:0,90,1349	0/0:21,0:21:63.21:0,63,942	0/0:42,0:42:99:0,123,1838	0/0:26,0:26:78.20:0,78,1103	0/0:22,0:22:66.22:0,66,988	0/0:21,0:21:54.14:0,54,784	0/0:43,0:43:99:0,126,1864	0/0:28,0:28:81.24:0,81,1151	1/1:0,20:20:51.17:662,51,0	1/1:0,31:31:90.29:1168,90,0	0/0:24,0:24:72.24:0,72,1079	1/1:2,30:32:6.34:1061,6,0	1/1:0,23:23:63.20:817,63,0	1/1:0,13:13:36.12:467,36,0
chr10	6436148	.	C	CTG	26039.55	PASS	AB=0.580;AC=39;AF=0.696;AN=56;BaseQRankSum=11.264;DP=732;FS=3.480;HRun=0;HaplotypeScore=152.2936;InbreedingCoeff=0.9149;MQ=82.16;MQ0=1;MQRankSum=-7.761;QD=49.41;ReadPosRankSum=2.358;VQSLOD=5.2394;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,47:50:99:2415,129,0	0/0:13,0:13:39.13:0,39,573	0/0:23,0:23:66.13:0,66,902	0/0:26,0:26:68.41:0,68,883	0/0:41,0:41:99:0,123,1808	1/1:1,19:20:57.20:1067,57,0	1/1:2,23:25:69.24:1290,69,0	1/1:4,26:31:90.23:1569,90,0	1/1:2,20:22:60.21:1123,60,0	0/0:25,0:24:75.24:0,75,1070	0/0:17,0:17:51.17:0,51,751	1/1:2,36:37:96.33:1773,96,0	1/1:3,28:31:87.30:1608,87,0	1/1:1,17:19:48.16:892,48,0	1/1:2,24:26:72.25:1348,72,0	1/1:0,21:22:63.22:1179,63,0	1/1:1,22:23:69.19:1256,69,0	0/0:35,0:35:99:0,105,1544	1/1:5,15:20:54.16:959,54,0	1/1:1,23:24:69.24:1291,69,0	0/0:25,0:25:72.23:0,72,1038	1/1:5,25:30:75.26:1402,75,0	1/1:5,21:26:60.21:1122,60,0	1/1:3,25:28:75.26:1385,75,0	1/1:2,13:16:39.13:728,39,0	0/1:8,21:29:85:1105,0,85	1/1:1,37:38:99:2134,114,0	1/1:0,9:9:21.07:393,21,0
chr10	6436599	.	GTGACCCGTGGTCGC	G	15274.37	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=15.440;DP=664;FS=30.363;HRun=0;HaplotypeScore=294.1784;InbreedingCoeff=0.9991;MQ=84.08;MQ0=0;MQRankSum=-16.121;QD=88.29;ReadPosRankSum=4.220;VQSLOD=3.1269;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:61,0:61:99:0,175,11290	0/0:13,0:13:39.13:0,39,2698	0/0:24,0:24:63.22:0,63,3283	0/0:21,0:21:51.01:0,51,2284	0/0:31,0:31:90.31:0,90,5987	1/1:0,12:12:21.07:896,21,0	1/1:4,18:22:45.15:1916,45,0	0/0:33,0:33:99:0,99,5997	1/1:1,13:14:33.11:1407,33,0	0/0:34,0:34:99:0,99,6766	0/0:13,0:13:39.13:0,39,2719	0/0:16,0:16:48.16:0,48,3361	0/0:18,0:18:54.19:0,54,3676	0/0:24,0:24:69.24:0,69,4645	1/1:1,16:17:48.16:2045,48,0	1/1:2,12:14:30.10:1279,30,0	1/1:2,13:15:30.10:1279,30,0	0/0:34,0:34:99:0,102,7072	1/1:4,11:15:30.08:953,30,0	1/1:2,18:20:45.15:1919,45,0	0/0:45,0:45:99:0,135,8623	1/1:2,17:19:39.13:1660,39,0	0/0:19,0:19:45.15:0,45,2865	0/0:35,0:35:99:0,105,6451	1/1:1,24:25:45.15:1919,45,0	0/0:35,0:35:99:0,105,6696	0/0:16,0:16:48.16:0,48,2977	0/0:19,0:19:57.20:0,57,4025
chr10	6436760	.	G	GATGTGTAATAAACCCAACAT	39354.13	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-3.458;DP=680;FS=0.327;HRun=0;HaplotypeScore=361.9271;InbreedingCoeff=0.9996;MQ=73.89;MQ0=0;MQRankSum=-18.438;QD=174.13;ReadPosRankSum=-0.536;VQSLOD=3.6693;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,105,4383	0/0:26,0:26:75.26:0,75,3926	0/0:21,0:21:51.15:0,51,2146	0/0:19,0:19:50.72:0,51,1345	0/0:25,0:25:72.25:0,72,3993	1/1:13,1:14:39.13:2553,39,0	1/1:12,2:16:33.11:2574,33,0	0/0:26,0:26:72.24:0,72,3113	1/1:19,5:25:63.22:4257,63,0	0/0:31,0:31:81.26:0,81,3900	0/0:20,0:20:60.21:0,60,3245	0/0:21,0:21:63.22:0,63,3329	0/0:21,0:21:63.20:0,63,3182	0/0:19,0:19:57.20:0,57,2876	1/1:18,6:28:63.22:4646,63,0	1/1:10,4:15:39.13:2984,39,0	1/1:13,2:17:36.12:2474,36,0	0/0:32,0:32:90.27:0,90,4088	1/1:12,2:17:36.11:1592,36,0	1/1:24,6:32:87.30:5812,87,0	0/0:34,0:34:96.30:0,96,4402	1/1:24,10:34:93.32:7289,93,0	0/0:29,0:29:81.27:0,81,4147	0/0:25,0:25:72.16:0,72,3225	1/1:20,6:27:81.28:5174,81,0	0/0:36,0:36:99:0,108,4955	0/0:25,0:25:72.25:0,72,3560	0/0:8,0:8:24.08:0,24,1276
chr10	6436884	.	G	GGGCA	31783.10	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-14.110;DP=722;FS=16.793;HRun=0;HaplotypeScore=109.1715;InbreedingCoeff=0.9996;MQ=85.91;MQ0=0;MQRankSum=-13.779;QD=64.34;ReadPosRankSum=0.645;VQSLOD=5.8980;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,41:45:93.32:2526,93,0	0/0:8,0:8:24.08:0,24,440	0/0:32,0:32:81.27:0,81,1506	0/0:26,0:26:57.11:0,57,1068	0/0:20,0:20:60.21:0,60,1162	1/1:2,19:21:42.14:1123,42,0	1/1:6,18:25:60.21:1567,60,0	1/1:7,16:27:69.20:1663,69,0	1/1:3,17:20:57.20:1503,57,0	0/0:22,0:22:66.23:0,66,1267	0/0:17,0:17:48.15:0,48,882	1/1:3,24:29:69.24:1825,69,0	1/1:3,15:18:48.16:1273,48,0	1/1:4,21:25:66.23:1754,66,0	1/1:1,20:23:60.21:1635,60,0	1/1:6,22:28:69.24:1818,69,0	1/1:1,25:26:69.24:1860,69,0	0/0:29,0:29:78.27:0,78,1502	1/1:3,17:20:57.15:1458,57,0	1/1:3,23:28:57.19:1510,57,0	0/0:74,0:74:99:0,211,3954	1/1:1,16:17:45.15:1222,45,0	1/1:5,13:21:45.07:1142,45,0	1/1:1,34:37:84.29:2301,84,0	1/1:1,23:26:57.20:1558,57,0	1/1:3,18:23:66.20:1634,66,0	1/1:4,17:19:56.88:1529,57,0	1/1:1,12:13:33.11:882,33,0
chr10	6436990	.	A	AC	24182.67	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-0.725;DP=842;FS=0.594;HRun=2;HaplotypeScore=99.4792;InbreedingCoeff=1.0000;MQ=90.81;MQ0=0;MQRankSum=-7.388;QD=39.45;ReadPosRankSum=4.700;VQSLOD=4.5393;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,64:66:99:2548,178,0	0/0:12,0:12:33.06:0,33,381	0/0:35,0:35:99:0,102,1221	0/0:33,0:33:90.28:0,90,1091	0/0:30,0:30:90.28:0,90,1114	1/1:0,31:31:84.28:1209,84,0	1/1:1,27:28:78.26:1123,78,0	1/1:1,28:29:84.24:1154,84,0	1/1:1,26:27:81.27:1153,81,0	0/0:28,0:28:75.23:0,75,920	0/0:18,0:18:51.16:0,51,632	1/1:0,31:31:78.26:1123,78,0	1/1:2,22:24:63.19:888,63,0	1/1:0,23:23:69.23:993,69,0	1/1:0,28:28:81.27:1166,81,0	1/1:0,33:33:96.32:1382,96,0	1/1:1,35:36:93.31:1339,93,0	0/0:26,0:26:69.22:0,69,852	1/1:3,25:28:72.24:1037,72,0	1/1:1,24:25:69.23:993,69,0	0/0:47,0:47:99:0,129,1583	1/1:0,19:19:48.16:691,48,0	1/1:1,35:36:96.32:1381,96,0	1/1:4,32:36:99:1408,99,0	1/1:1,32:33:90.26:1272,90,0	1/1:2,29:31:87.29:1253,87,0	1/1:1,30:33:96.32:1379,96,0	1/1:0,16:16:48.16:691,48,0
chr10	6437396	.	AT	A	7477.44	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=13.882;DP=729;FS=6.040;HRun=5;HaplotypeScore=123.4758;InbreedingCoeff=0.9988;MQ=77.50;MQ0=0;MQRankSum=-1.345;QD=29.32;ReadPosRankSum=0.505;VQSLOD=3.5635;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:65,0:65:99:0,184,2469	0/0:6,0:6:18.06:0,18,246	0/0:15,0:15:39.04:0,39,452	0/0:22,0:22:54.13:0,54,684	0/0:23,0:23:60.20:0,60,811	1/1:2,18:20:48.14:545,48,0	1/1:3,27:30:78.22:885,78,0	0/0:33,0:33:78.25:0,78,1052	1/1:1,20:21:54.15:613,54,0	0/0:31,0:31:87.27:0,87,1149	0/0:27,0:27:69.02:0,69,909	0/0:25,0:25:72.24:0,72,984	0/0:25,0:25:75.24:0,75,1007	0/0:24,0:24:72.23:0,72,969	1/1:1,22:23:60.17:681,60,0	1/1:1,21:22:57.16:647,57,0	1/1:0,33:33:93.27:1055,93,0	0/0:25,0:25:72.17:0,72,940	1/1:4,27:31:81.22:910,81,0	1/1:3,29:32:78.22:884,78,0	0/0:34,0:34:99:0,99,1352	1/1:2,25:27:65.93:748,66,0	0/0:18,0:18:54.18:0,54,739	0/0:41,0:41:99:0,123,1664	1/1:1,15:16:45.13:511,45,0	0/0:21,0:21:60.20:0,60,821	0/0:26,0:26:75.24:0,75,1008	0/0:13,0:13:39.13:0,39,533
chr10	6440124	.	C	CCAAGAGAAT	60842.49	PASS	AB=0.587;AC=39;AF=0.696;AN=56;BaseQRankSum=1.411;DP=751;FS=3.640;HRun=0;HaplotypeScore=211.8742;InbreedingCoeff=0.9061;MQ=69.73;MQ0=0;MQRankSum=-19.099;QD=110.02;ReadPosRankSum=-0.940;VQSLOD=5.1098;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:18,22:44:93.27:3833,93,0	0/0:10,0:10:24.08:0,24,745	0/0:21,0:21:51.17:0,51,1342	0/0:19,0:19:42.12:0,42,1110	0/0:23,0:23:60.21:0,60,1810	1/1:8,12:20:54.18:2435,54,0	1/1:15,12:28:75.26:3051,75,0	1/1:26,7:35:93.26:3647,93,0	1/1:12,18:31:81.03:3547,81,0	0/0:34,0:34:99:0,99,3023	0/0:17,0:17:51.16:0,51,1411	1/1:7,22:34:90.31:4114,90,0	1/1:8,20:29:78.27:3397,78,0	1/1:12,21:37:87.30:3922,87,0	1/1:12,20:33:96.33:4125,96,0	1/1:8,15:26:66.23:2746,66,0	1/1:8,5:17:33.11:1164,33,0	0/0:19,0:19:57.20:0,57,1710	1/1:8,15:24:69.24:3018,69,0	1/1:11,19:33:93.28:3731,93,0	0/0:55,0:55:99:0,154,4614	1/1:7,14:23:53.85:2449,54,0	1/1:6,14:22:57.03:2499,57,0	1/1:5,13:21:33.11:1418,33,0	1/1:7,26:34:99:4452,99,0	0/1:11,21:37:99:3979,0,171	1/1:6,15:21:63.22:2877,63,0	1/1:0,3:3:9.03:440,9,0
chr10	6440732	.	T	TTGTGTG	4152.85	PASS	AB=0.729;AC=49;AF=0.942;AN=52;BaseQRankSum=-3.203;DP=614;FS=1.566;HRun=0;HaplotypeScore=166.0924;InbreedingCoeff=-0.0454;MQ=54.69;MQ0=11;MQRankSum=-0.919;QD=7.30;ReadPosRankSum=-0.937;VQSLOD=2.1226;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:25,2:44:16.40:339,16,0	1/1:1,4:5:1.12:94,1,0	./.	./.	0/1:7,8:21:53.06:125,0,53	1/1:18,0:17:3.33:27,3,0	1/1:31,0:31:12.38:139,12,0	1/1:18,0:17:2.19:5,2,0	1/1:26,0:26:5.65:44,6,0	1/1:18,9:28:21.57:355,22,0	1/1:8,6:15:5.94:67,6,0	1/1:16,9:29:6.59:286,7,0	1/1:16,1:17:17.64:199,18,0	1/1:14,13:31:17.76:444,18,0	1/1:19,0:18:5.97:141,6,0	1/1:16,0:16:6.87:50,7,0	1/1:32,0:33:16.25:204,16,0	1/1:8,1:21:11.19:211,11,0	1/1:14,0:13:1.36:2,1,0	1/1:13,0:13:3.01:49,3,0	1/1:22,0:23:14.20:227,14,0	1/1:21,0:19:5.89:99,6,0	1/1:3,0:11:2.37:38,2,0	0/1:20,2:26:34.35:392,0,34	1/1:28,0:27:8.94:123,9,0	1/1:14,0:28:35.01:340,35,0	0/1:17,0:24:80.53:128,0,81	1/1:5,0:5:3:25,3,0
chr10	6441183	.	TGG	T	5645.78	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=2.166;DP=556;FS=12.578;HRun=9;HaplotypeScore=91.1815;InbreedingCoeff=0.9970;MQ=77.92;MQ0=0;MQRankSum=-1.007;QD=27.81;ReadPosRankSum=1.884;VQSLOD=3.5231;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:38:59.36:0,59,210	0/0:9,0:9:21.07:0,21,341	0/0:31,0:28:28.22:0,28,685	0/0:25,0:21:38.26:0,38,585	0/0:21,0:21:45.14:0,45,703	1/1:5,16:21:45.12:524,45,0	1/1:2,17:19:48.14:559,48,0	0/0:18,0:18:34.36:0,34,543	1/1:1,13:14:36.11:420,36,0	0/0:13,0:13:21.07:0,21,345	0/0:15,0:15:45.15:0,45,721	0/0:3,0:14:27.96:0,28,135	0/0:1,0:25:57.49:0,57,203	0/0:0,0:16:37.43:0,37,132	1/1:2,25:27:63.18:734,63,0	1/1:2,22:24:69.19:796,69,0	1/1:3,17:20:42.12:489,42,0	0/0:21,0:21:60.12:0,60,945	1/1:3,16:19:48.10:541,48,0	1/1:3,18:21:48.13:550,48,0	0/0:25,0:25:63.22:0,63,1031	1/1:1,14:15:39.07:439,39,0	0/0:4,0:16:24.95:0,25,88	0/0:1,0:20:38.68:0,39,134	1/1:4,19:23:50.23:592,50,0	0/0:21,0:20:54.18:0,54,883	0/0:19,0:19:45.15:0,45,730	0/0:6,0:6:18.06:0,18,295
chr10	6441454	.	A	AGGTTCTGG	45990.24	PASS	AB=0.955;AC=41;AF=0.732;AN=56;BaseQRankSum=-11.422;DP=691;FS=5.610;HRun=0;HaplotypeScore=144.7559;InbreedingCoeff=0.9083;MQ=74.79;MQ0=0;MQRankSum=-18.363;QD=88.27;ReadPosRankSum=2.628;VQSLOD=5.5552;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,22:34:72.63:2843,73,0	0/0:11,0:11:33.10:0,33,858	0/0:19,0:19:51.14:0,51,1189	0/0:30,0:29:72.15:0,72,1756	0/0:20,0:20:57.20:0,57,1626	1/1:1,16:21:42.14:1774,42,0	1/1:7,14:23:60.01:2178,60,0	1/1:10,13:37:93.28:3487,93,0	1/1:5,12:24:48.16:2016,48,0	0/0:29,0:29:87.27:0,87,2275	0/0:15,0:15:42.14:0,42,1159	1/1:3,19:26:59.90:2586,60,0	1/1:3,24:33:75.26:3279,75,0	1/1:3,23:29:78.22:3281,78,0	1/1:5,18:29:68.85:2765,69,0	1/1:2,16:21:51.18:2197,51,0	1/1:3,11:18:27.09:1087,27,0	0/1:20,1:21:70.62:71,0,1536	1/1:6,11:19:42.14:1737,42,0	1/1:5,20:31:80.87:2588,81,0	0/0:46,0:46:99:0,132,3677	1/1:4,20:29:71.83:2380,72,0	1/1:5,7:15:32.78:867,33,0	1/1:3,23:28:66.02:2730,66,0	1/1:2,19:25:63.17:2568,63,0	1/1:8,17:32:75.23:3012,75,0	1/1:1,11:15:36.02:1518,36,0	1/1:3,6:11:24.08:1025,24,0
chr10	6441946	.	C	CTA	31170.20	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-6.925;DP=814;FS=5.017;HRun=0;HaplotypeScore=102.3265;InbreedingCoeff=0.9826;MQ=82.02;MQ0=0;MQRankSum=-3.575;QD=51.27;ReadPosRankSum=1.215;VQSLOD=5.0676;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,40:44:99:2260,117,0	0/0:14,0:14:39.11:0,39,574	0/0:21,0:21:63.19:0,63,893	0/0:21,0:22:50.94:0,51,762	0/0:26,0:26:78.26:0,78,1189	1/1:1,28:29:81.28:1564,81,0	1/1:2,44:46:99:2433,126,0	1/1:9,36:48:99:2532,141,0	1/1:1,41:42:99:2181,114,0	0/0:31,0:31:84.28:0,84,1268	0/0:19,0:19:54.17:0,54,805	1/1:2,28:30:78.27:1507,78,0	1/1:1,34:36:99:1971,102,0	1/1:3,38:41:99:2026,105,0	1/1:2,23:25:63.22:1217,63,0	1/1:2,28:30:81.28:1545,81,0	1/1:2,24:27:63.22:1217,63,0	0/0:18,0:18:54.18:0,54,827	1/1:6,19:24:66.22:1232,66,0	1/1:2,17:20:51.17:985,51,0	0/0:55,0:55:99:0,163,2472	1/1:1,27:28:75.26:1449,75,0	1/1:2,21:23:57.20:1101,57,0	1/1:0,27:29:72.25:1391,72,0	1/1:0,22:22:63.22:1217,63,0	1/1:0,26:26:78.27:1491,78,0	1/1:1,33:34:90.22:1737,90,0	1/1:1,2:3:6.02:116,6,0
chr10	6443057	.	AT	A	9948.12	PASS	AB=1.000;AC=41;AF=0.732;AN=56;BaseQRankSum=9.214;DP=573;FS=11.720;HRun=9;HaplotypeScore=56.4112;InbreedingCoeff=0.9460;MQ=72.74;MQ0=0;MQRankSum=-3.299;QD=22.06;ReadPosRankSum=0.766;VQSLOD=4.9509;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,21:25:56.06:500,56,0	0/0:17,0:17:48.13:0,48,544	0/1:13,0:12:1.61:2,0,185	0/0:13,0:13:19.75:0,20,195	0/0:18,0:18:48.13:0,48,544	1/1:1,20:21:57.03:522,57,0	1/1:1,15:16:39.49:358,39,0	1/1:4,23:27:69:622,69,0	1/1:1,27:28:72.04:659,72,0	0/0:25,0:25:69.20:0,69,789	0/0:19,0:19:51.15:0,51,585	1/1:1,17:18:42.02:384,42,0	1/1:4,17:21:48.02:439,48,0	1/1:2,24:26:63.03:576,63,0	1/1:0,17:17:48.03:439,48,0	1/1:1,17:18:45.02:412,45,0	1/1:0,23:23:66.04:604,66,0	0/0:13,0:13:33.10:0,33,381	1/1:4,24:29:70.98:626,71,0	1/1:2,22:24:57.02:521,57,0	0/0:17,0:17:48.09:0,48,529	1/1:2,26:28:74.99:678,75,0	1/1:2,19:21:51.01:467,51,0	1/1:2,14:16:39.02:357,39,0	1/1:1,19:20:45.02:412,45,0	1/1:4,19:23:57.03:520,57,0	1/1:0,21:21:54.03:494,54,0	1/1:0,16:16:39.02:357,39,0
chr10	6444528	.	C	CACAGACAGACAG	11418.45	PASS	AB=0.638;AC=37;AF=0.661;AN=56;BaseQRankSum=-10.805;DP=757;FS=1.112;HRun=0;HaplotypeScore=288.1100;InbreedingCoeff=0.6309;MQ=59.88;MQ0=2;MQRankSum=-8.019;QD=20.25;ReadPosRankSum=-5.919;VQSLOD=2.6232;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:21,4:25:6.02:292,6,0	0/0:6,0:11:4.88:0,5,14	0/0:26,0:23:18:0,18,283	0/0:22,0:19:1.93:0,2,102	0/0:13,0:24:8.72:0,9,24	1/1:19,10:29:9.03:432,9,0	1/1:22,0:22:18.03:346,18,0	1/1:27,0:27:24.07:319,24,0	1/1:21,9:31:30.05:1192,30,0	0/1:15,0:36:91.10:91,0,106	0/0:9,0:24:9.97:0,10,28	1/1:12,9:23:18.06:928,18,0	1/1:17,8:27:21.07:1053,21,0	1/1:16,9:27:6.02:311,6,0	1/1:22,13:37:18.06:864,18,0	1/1:19,8:29:12.04:524,12,0	1/1:21,4:30:9.03:470,9,0	0/1:11,0:31:2.71:3,0,50	1/1:19,4:23:20.06:586,20,0	1/1:28,11:44:21.07:1001,21,0	0/0:21,0:39:16.09:0,16,140	1/1:15,14:30:27.09:1383,27,0	1/1:14,7:24:12.92:559,13,0	1/1:11,8:20:0.45:1,0,0	1/1:16,8:27:18.06:963,18,0	0/1:10,0:20:6.15:103,0,6	0/0:18,0:42:23.59:0,24,77	0/0:0,0:5:5.29:0,5,14
chr10	6446124	.	A	ACT	9519.54	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=12.177;DP=725;FS=1.820;HRun=0;HaplotypeScore=94.3759;InbreedingCoeff=0.9979;MQ=76.89;MQ0=1;MQRankSum=-3.108;QD=51.46;ReadPosRankSum=3.847;VQSLOD=5.4160;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,44:46:99:2340,123,0	0/0:16,0:16:48.16:0,48,734	0/0:19,0:19:56.64:0,57,809	0/0:15,0:15:39.12:0,39,570	0/0:27,0:27:81.28:0,81,1238	0/0:20,0:20:60.20:0,60,919	0/0:23,0:23:69.17:0,69,986	0/0:31,0:31:90.31:0,90,1377	0/0:32,0:32:96.31:0,96,1447	0/0:34,0:34:99:0,99,1480	0/0:17,0:17:51.17:0,51,779	1/1:2,36:38:99:2027,105,0	1/1:0,27:29:71.97:1390,72,0	1/1:3,28:31:90.31:1735,90,0	0/0:34,0:34:99:0,99,1515	0/0:26,1:27:23.31:0,23,1136	0/0:37,0:37:99:0,111,1698	0/0:16,0:16:48.16:0,48,735	0/0:21,0:21:60.20:0,60,918	0/0:31,0:31:93.30:0,93,1403	0/0:33,0:33:90.31:0,90,1378	0/0:24,0:24:72.23:0,72,1078	1/1:1,20:21:60.21:1158,60,0	1/1:1,17:18:45.14:870,45,0	0/0:27,0:27:81.28:0,81,1240	0/0:22,0:22:63.21:0,63,965	0/0:28,0:27:81.27:0,81,1237	0/0:6,0:6:18.06:0,18,274
chr10	6446558	.	T	TACAC	3154.53	PASS	AB=0.964;AC=30;AF=0.577;AN=52;BaseQRankSum=-7.473;DP=767;FS=5.646;HRun=0;HaplotypeScore=238.6870;InbreedingCoeff=0.1138;MQ=55.63;MQ0=5;MQRankSum=0.259;QD=5.70;ReadPosRankSum=-1.088;VQSLOD=2.0879;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:38,0:38:23.43:99,23,0	1/1:5,6:11:12.04:280,12,0	0/0:26,0:15:2.97:0,3,20	0/0:36,0:18:2.04:0,2,6	1/1:8,16:26:26.74:591,27,0	1/1:29,0:28:6.93:116,7,0	1/1:33,0:33:8.39:39,8,0	./.	0/1:25,0:25:8.87:52,0,9	1/1:16,16:35:51.20:751,51,0	1/1:4,14:17:6.02:144,6,0	0/1:26,0:26:29.95:43,0,30	0/1:23,0:23:14.01:14,0,91	0/1:25,0:25:20.91:29,0,21	0/1:43,0:43:10.52:129,0,11	0/1:31,0:31:26.17:39,0,26	0/0:22,0:22:9.01:0,9,83	0/1:10,11:23:30.20:282,0,30	0/0:30,0:30:14.96:0,15,139	0/1:19,0:19:0.18:70,0,0	1/1:12,28:40:13.98:447,14,0	0/1:19,0:19:6.65:25,0,7	1/1:32,0:32:2.53:74,3,0	0/1:33,0:33:16.14:16,0,38	1/1:23,0:23:16.79:80,17,0	0/0:42,0:42:5.81:0,6,495	0/0:26,0:26:17.40:0,17,139	./.
chr10	6446573	.	ACACACACACACACACG	A	13214.69	PASS	AB=0.903;AC=34;AF=0.607;AN=56;BaseQRankSum=11.629;DP=825;FS=5.035;HRun=0;HaplotypeScore=295.2523;InbreedingCoeff=0.5181;MQ=52.37;MQ0=9;MQRankSum=-7.038;QD=22.25;ReadPosRankSum=4.526;VQSLOD=2.8147;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:44,0:44:1.58:517,2,0	0/0:10,0:10:23.09:0,23,981	0/0:30,0:12:33.05:0,33,730	0/0:38,0:12:23.08:0,23,535	0/0:27,0:27:42.11:0,42,2055	1/1:29,0:28:39.13:849,39,0	0/1:30,0:30:14.08:122,0,14	1/1:5,31:36:92.99:1223,93,0	0/1:30,0:30:7.25:476,0,7	0/0:30,0:30:86.29:0,86,3337	0/0:17,0:17:11.94:0,12,548	1/1:28,1:29:3.10:396,3,0	1/1:27,0:27:15.58:408,16,0	0/1:26,2:28:4.85:560,0,5	1/1:46,0:46:11.30:1061,11,0	1/1:33,0:33:3.43:383,3,0	1/1:23,0:23:10.59:237,11,0	0/0:25,0:25:39.13:0,39,1627	1/1:32,0:32:12.65:659,13,0	1/1:20,1:21:29.21:596,29,0	0/0:53,0:52:75.24:0,75,2566	0/1:22,1:23:0.92:389,0,1	1/1:32,1:33:23.67:515,24,0	1/1:27,2:29:13.97:357,14,0	0/1:26,0:26:0.97:353,0,1	0/1:4,39:43:99:3282,0,152	1/1:1,28:29:23.91:782,24,0	1/1:3,0:3:1.64:47,2,0
chr10	6446575	.	ACACACACACACACG	A	16822.88	PASS	AB=1.000;AC=39;AF=0.696;AN=56;BaseQRankSum=10.428;DP=825;FS=1.875;HRun=0;HaplotypeScore=264.6072;InbreedingCoeff=0.7678;MQ=52.28;MQ0=9;MQRankSum=-6.895;QD=28.66;ReadPosRankSum=3.167;VQSLOD=3.4223;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,33:43:5.68:903,6,0	0/0:11,0:11:26.01:0,26,898	0/0:31,0:12:27.08:0,27,589	0/0:39,0:12:17.07:0,17,521	0/0:29,0:29:47.59:0,48,1768	1/1:2,26:28:38.96:1387,39,0	1/1:3,27:30:5.87:226,6,0	1/1:34,0:34:74.92:655,75,0	1/1:3,27:30:26.68:898,27,0	0/0:31,0:31:83.23:0,83,2806	0/0:17,0:17:11.75:0,12,472	1/1:5,23:28:21.04:584,21,0	1/1:1,26:27:16.27:696,16,0	1/1:7,21:28:19.89:676,20,0	1/1:3,42:45:2.20:1821,2,0	1/1:3,29:32:22.83:741,23,0	1/1:2,21:23:11.97:394,12,0	0/0:25,0:25:20.11:0,20,1406	1/1:5,27:32:80.98:1327,81,0	1/1:2,19:21:32.93:1039,33,0	0/0:54,0:53:75.21:0,75,2223	1/1:3,20:23:18.02:530,18,0	1/1:4,29:33:23.68:815,24,0	1/1:3,26:29:27.09:618,27,0	1/1:3,22:26:0.09:641,0,0	0/1:43,0:43:84.24:2329,0,84	1/1:29,0:29:23.91:532,24,0	1/1:3,0:3:1.85:12,2,0
chr10	6447561	.	GCT	G	4827.38	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=4.435;DP=640;FS=15.763;HRun=0;HaplotypeScore=152.0553;InbreedingCoeff=0.9991;MQ=83.59;MQ0=0;MQRankSum=-2.839;QD=35.50;ReadPosRankSum=3.182;VQSLOD=5.7568;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,44:46:99:1596,114,0	0/0:10,0:10:27.09:0,27,482	0/0:25,0:25:65.35:0,65,1116	0/0:22,0:22:55.66:0,56,916	0/0:20,0:20:60.20:0,60,1032	0/0:25,0:25:69.22:0,69,1189	0/0:35,0:35:93.30:0,93,1615	0/0:34,0:34:78.22:0,78,1254	0/0:37,0:37:99:0,105,1847	0/0:13,0:13:33.09:0,33,559	0/0:12,0:12:33.10:0,33,562	1/1:0,19:19:54.18:756,54,0	1/1:0,19:19:48.16:672,48,0	1/1:2,22:24:63.21:882,63,0	0/0:26,0:26:72.23:0,72,1262	0/0:14,0:14:42.14:0,42,753	0/0:35,0:35:99:0,102,1792	0/0:25,0:25:72.23:0,72,1260	0/0:22,0:22:57.16:0,57,905	0/0:24,0:24:72.23:0,72,1234	0/0:35,0:35:99:0,99,1660	0/0:14,0:14:39.11:0,39,618	1/1:0,9:9:24.08:336,24,0	1/1:2,17:19:45.05:585,45,0	0/0:21,0:21:60.20:0,60,1058	0/0:19,0:19:54.18:0,54,925	0/0:26,0:26:75.24:0,75,1271	0/0:10,0:10:30.10:0,30,518
chr10	6447777	.	G	GCT	2368.10	PASS	AB=0.860;AC=16;AF=0.286;AN=56;BaseQRankSum=5.245;DP=692;FS=33.132;HRun=0;HaplotypeScore=231.3485;InbreedingCoeff=-0.4017;MQ=65.95;MQ0=2;MQRankSum=-10.221;QD=5.96;ReadPosRankSum=-10.343;VQSLOD=-0.4057;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:20,4:24:83.40:83,0,388	0/1:9,3:12:99:130,0,150	0/0:27,0:26:63.68:0,64,804	0/0:25,0:25:48.44:0,48,696	0/0:16,2:18:14.78:0,15,193	0/0:23,0:22:32.88:0,33,569	0/1:31,1:32:22.47:22,0,665	0/1:30,1:26:99:272,0,464	0/0:27,2:28:24.65:0,25,508	0/1:29,7:35:99:400,0,651	0/1:11,3:14:50.32:50,0,251	0/1:16,7:20:99:174,0,231	0/1:25,3:28:99:261,0,476	0/1:19,14:32:99:251,0,289	0/0:29,1:29:37.11:0,37,806	0/1:20,4:24:43.83:44,0,513	0/0:18,0:18:27.12:0,27,335	0/1:17,7:24:99:306,0,501	0/1:31,2:30:99:228,0,575	0/0:17,0:17:33.11:0,33,462	0/0:36,6:38:18.82:0,19,266	0/0:24,0:24:44.45:0,44,632	0/0:16,0:16:24.53:0,25,325	0/1:23,3:24:99:102,0,228	0/0:26,0:25:52.05:0,52,787	0/1:28,1:28:78.39:78,0,828	0/1:19,2:21:36.04:36,0,470	0/1:5,2:7:88.60:89,0,192
chr10	6447813	.	G	GCT	2210.68	PASS	AB=0.925;AC=21;AF=0.375;AN=56;BaseQRankSum=10.662;DP=827;FS=55.855;HRun=0;HaplotypeScore=276.9522;InbreedingCoeff=-0.6108;MQ=53.44;MQ0=6;MQRankSum=-9.100;QD=3.75;ReadPosRankSum=0.871;VQSLOD=1.3344;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:37,2:38:31.64:32,0,565	0/1:20,1:21:11.14:11,0,555	0/0:30,0:24:52.90:0,53,586	0/0:21,0:19:40.92:0,41,556	0/0:16,1:17:23.83:0,24,333	0/1:28,1:29:99:182,0,384	0/1:34,2:36:45.86:46,0,704	0/1:31,2:25:64.24:64,0,459	0/1:27,2:30:76.14:76,0,620	0/1:42,4:44:99:216,0,1131	0/1:9,1:10:45.31:45,0,157	0/1:25,3:25:97.95:98,0,436	0/1:26,5:30:99:255,0,410	0/1:28,1:29:67.51:68,0,508	0/1:37,0:36:52:52,0,688	0/1:24,0:24:99:205,0,508	0/1:21,0:21:15.15:15,0,528	0/0:31,0:31:18.48:0,18,953	0/1:35,3:35:50.47:50,0,881	0/0:16,0:16:3.59:0,4,187	0/0:85,0:78:43.14:0,43,1045	0/1:21,2:23:61.89:62,0,326	0/1:17,1:19:46.56:47,0,311	0/0:36,2:36:18.09:0,18,390	0/1:28,1:29:99:235,0,616	0/1:28,5:33:99:381,0,594	0/1:21,1:22:28.94:29,0,426	0/1:5,3:8:63.48:199,0,63
chr10	6447843	.	T	TCCTGCCCC	6119.47	PASS	AB=0.857;AC=23;AF=0.411;AN=56;BaseQRankSum=11.049;DP=730;FS=0.788;HRun=0;HaplotypeScore=267.7510;InbreedingCoeff=-0.7034;MQ=53.46;MQ0=3;MQRankSum=-9.751;QD=10.89;ReadPosRankSum=-2.859;VQSLOD=3.3213;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:33,8:43:99:120,0,1849	0/0:14,0:14:10.25:0,10,795	0/0:31,0:20:44.68:0,45,1050	0/0:23,0:20:43.65:0,44,832	0/0:20,0:20:14.12:0,14,918	0/1:21,7:29:90.86:91,0,1347	0/1:30,4:36:99:388,0,1562	0/1:14,0:15:99:105,0,719	0/1:18,5:24:99:133,0,1018	0/1:27,0:29:99:480,0,1052	0/1:8,0:8:42.43:42,0,298	0/1:17,1:20:99:244,0,1170	0/1:17,2:23:99:695,0,448	0/1:26,4:32:99:586,0,1315	0/1:26,4:31:99:219,0,1339	0/1:18,0:20:99:252,0,738	0/1:23,0:25:99:131,0,1464	0/1:30,1:31:99:206,0,2013	0/1:11,3:19:99:528,0,585	0/1:12,0:12:32.33:32,0,585	0/0:75,0:75:30.39:0,30,2793	0/1:20,0:22:99:109,0,767	0/1:13,0:15:99:111,0,390	0/1:43,1:46:45.55:46,0,1761	0/1:18,0:21:99:213,0,961	0/1:17,1:22:99:341,0,878	0/1:12,6:22:99:719,0,583	0/1:7,1:10:99:330,0,426
chr10	6449603	.	TGTCCGG	T	6229.81	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=13.950;DP=757;FS=6.680;HRun=0;HaplotypeScore=162.1307;InbreedingCoeff=0.9975;MQ=87.36;MQ0=0;MQRankSum=-14.571;QD=52.79;ReadPosRankSum=0.033;VQSLOD=4.5456;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:57:99:0,160,5602	1/1:1,17:18:45.15:1081,45,0	0/0:20,0:20:57.10:0,57,1841	0/0:37,0:37:99:0,108,3285	1/1:0,23:22:42.61:974,43,0	0/0:19,0:18:51.17:0,51,1837	0/0:32,0:32:96.33:0,96,3414	0/0:40,0:40:99:0,114,3873	0/0:30,0:30:87.30:0,87,2996	1/1:7,29:36:90.28:2068,90,0	1/1:0,17:17:51.17:1170,51,0	0/0:24,0:24:72.25:0,72,2533	0/0:24,0:24:69.24:0,69,2356	0/0:27,0:27:75.22:0,75,2542	0/0:32,0:32:96.33:0,96,3274	0/0:33,0:33:99:0,99,3461	0/0:49,0:49:99:0,148,5172	1/1:1,8:9:21.07:505,21,0	0/0:22,0:22:66.23:0,66,2267	0/0:18,0:18:48.16:0,48,1645	1/1:5,10:15:18.06:432,18,0	0/0:19,0:19:54.17:0,54,1790	0/0:21,0:21:57.19:0,57,1916	0/0:33,0:33:99:0,99,3479	0/0:33,0:33:96.33:0,96,3460	0/0:26,0:26:75.26:0,75,2626	0/0:29,0:29:84.29:0,84,2718	0/0:14,0:14:42.14:0,42,1492
chr10	6449913	.	GCA	G	7386.04	PASS	AB=0.838;AC=31;AF=0.574;AN=54;BaseQRankSum=-0.213;DP=928;FS=1.946;HRun=0;HaplotypeScore=149.8806;InbreedingCoeff=0.4464;MQ=57.41;MQ0=17;MQRankSum=0.180;QD=10.89;ReadPosRankSum=1.449;VQSLOD=4.6440;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:39,4:66:78.57:79,0,706	1/1:5,8:16:26.36:225,26,0	./.	0/0:20,0:6:2.98:0,3,21	1/1:14,17:32:16.67:284,17,0	0/1:10,9:23:12.99:248,0,13	0/1:15,23:41:75.09:488,0,75	0/0:25,0:25:8.10:0,8,193	1/1:10,26:41:72.12:714,72,0	1/1:22,22:51:44.21:727,44,0	1/1:15,13:30:32.38:293,32,0	0/0:21,1:40:31.99:0,32,610	0/0:11,1:33:31.96:0,32,570	0/0:13,1:41:49.55:0,50,721	1/1:10,29:41:74.71:791,75,0	1/1:14,17:31:65.17:634,65,0	1/1:16,17:35:50.35:531,50,0	1/1:12,9:21:22.24:370,22,0	0/1:15,1:16:18.06:18,0,167	0/0:23,1:24:17.11:0,17,667	1/1:33,39:78:58.43:948,58,0	1/1:10,22:31:32.61:544,33,0	0/0:8,0:21:20.98:0,21,204	0/1:17,2:44:4.61:5,0,726	1/1:8,14:25:20.65:362,21,0	0/1:28,4:31:83.46:83,0,627	0/1:13,2:15:43.51:44,0,246	0/0:19,0:18:11.32:0,11,368
chr10	6450986	.	AGT	A	12623.14	PASS	AB=0.801;AC=44;AF=0.786;AN=56;BaseQRankSum=-6.887;DP=819;FS=2.331;HRun=0;HaplotypeScore=139.3575;InbreedingCoeff=0.7597;MQ=67.38;MQ0=10;MQRankSum=4.510;QD=18.56;ReadPosRankSum=4.576;VQSLOD=4.8247;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,34:44:40.33:823,40,0	1/1:2,8:10:18.05:214,18,0	0/1:37,0:21:11.71:12,0,181	0/0:36,0:27:19.67:0,20,231	1/1:5,18:23:45.10:536,45,0	1/1:6,16:23:44.77:514,45,0	1/1:14,25:39:48.62:573,49,0	0/0:38,0:39:37.23:0,37,666	1/1:8,21:28:45.14:536,45,0	1/1:7,24:31:38.56:777,39,0	1/1:6,11:18:23.87:264,24,0	1/1:6,18:24:33.04:393,33,0	1/1:4,13:17:27.08:322,27,0	1/1:10,17:27:50.99:586,51,0	1/1:3,33:39:65.62:739,66,0	1/1:6,27:35:65.79:727,66,0	0/1:17,33:50:48.15:803,0,48	1/1:7,14:21:36.11:429,36,0	1/1:8,12:20:35.82:363,36,0	1/1:14,12:27:34.08:596,34,0	1/1:16,43:60:92.95:1065,93,0	1/1:2,16:19:48.86:552,49,0	1/1:5,16:21:36.11:429,36,0	1/1:7,35:43:78:890,78,0	1/1:2,16:19:41.96:479,42,0	0/0:10,0:29:14.21:0,14,337	0/0:4,0:23:15.01:0,15,138	0/0:7,0:11:6.01:0,6,73
chr10	6451102	.	C	CAAGTGTGTGTGT	18388.77	PASS	AB=0.941;AC=41;AF=0.732;AN=56;BaseQRankSum=-4.134;DP=868;FS=0.341;HRun=0;HaplotypeScore=326.1001;InbreedingCoeff=0.0117;MQ=53.10;MQ0=17;MQRankSum=-4.237;QD=24.26;ReadPosRankSum=-5.055;VQSLOD=2.1313;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:44,4:56:99:2161,123,0	0/1:9,0:11:99:123,0,347	0/0:46,0:17:48.12:0,48,689	0/0:64,0:35:34.78:0,35,968	0/1:15,0:18:99:510,0,175	1/1:0,15:22:8.30:442,8,0	1/1:2,21:33:2.07:143,2,0	0/1:35,0:34:99:353,0,481	1/1:1,20:37:36.22:1742,36,0	0/1:27,0:30:99:600,0,576	0/1:11,0:12:27.29:27,0,302	1/1:18,0:25:51.54:843,52,0	0/1:0,1:22:0.19:0,0,0	1/1:24,0:32:65.72:955,66,0	1/1:25,2:35:84.03:1405,84,0	1/1:2,15:25:12.04:448,12,0	1/1:27,3:34:85.08:1818,85,0	0/1:23,0:23:99:435,0,309	1/1:22,0:21:60.14:984,60,0	1/1:1,13:22:32.97:1016,33,0	0/1:83,0:87:99:1104,0,1655	1/1:0,19:30:27.01:562,27,0	1/1:8,0:16:18.03:243,18,0	1/1:29,0:31:50.06:875,50,0	1/1:2,11:26:2.66:592,3,0	0/1:35,0:33:99:373,0,298	0/1:22,0:22:99:325,0,125	0/1:10,0:10:16.96:308,0,17
chr10	6452536	.	T	TCGCCACCACAAGATGGCGCTGGCTTCCACTG	19479.07	PASS	AB=1.000;AC=45;AF=0.804;AN=56;BaseQRankSum=4.024;DP=322;FS=7.303;HRun=0;HaplotypeScore=193.9448;InbreedingCoeff=0.6799;MQ=62.96;MQ0=3;MQRankSum=-10.703;QD=81.84;ReadPosRankSum=0.320;VQSLOD=3.4184;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:13:21.07:1437,21,0	1/1:8,0:8:18.06:1253,18,0	0/0:19,0:18:39.13:0,39,1470	0/0:19,0:17:39.11:0,39,1456	1/1:11,0:11:24.08:889,24,0	1/1:10,0:9:24.08:1225,24,0	1/1:7,0:6:12.04:843,12,0	0/0:15,0:15:39.12:0,39,1929	1/1:2,1:9:6.02:511,6,0	1/1:13,0:13:36.12:2208,36,0	1/1:3,0:3:9.03:355,9,0	1/1:3,1:14:3.01:52,3,0	1/1:2,1:9:3.01:93,3,0	1/1:10,0:10:18.06:1957,18,0	1/1:5,2:18:3.01:62,3,0	1/1:10,0:9:18.06:2048,18,0	1/1:10,0:8:18.02:1284,18,0	1/1:5,0:5:3.01:226,3,0	1/1:8,0:8:21.01:735,21,0	1/1:10,0:10:21.07:541,21,0	1/1:6,0:5:3.01:89,3,0	1/1:6,0:6:12.04:425,12,0	1/1:7,0:7:15.05:389,15,0	1/1:14,0:12:21:1458,21,0	1/1:8,0:8:21.03:1356,21,0	0/1:25,0:25:44.59:45,0,4297	0/0:19,0:19:54.19:0,54,3250	0/0:12,0:12:33.07:0,33,1595
chr10	6452540	.	C	CA	1365.87	PASS	AB=0.675;AC=25;AF=0.463;AN=54;BaseQRankSum=-1.632;DP=278;FS=2.182;HRun=0;HaplotypeScore=41.5011;InbreedingCoeff=0.2035;MQ=62.01;MQ0=4;MQRankSum=-6.588;QD=9.29;ReadPosRankSum=3.016;VQSLOD=3.5932;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:3,9:11:11.01:57,0,11	1/1:1,7:8:9.91:154,10,0	0/0:17,0:16:39.11:0,39,506	0/0:16,0:14:39.13:0,39,525	1/1:2,9:11:6.02:96,6,0	1/1:0,10:9:23.81:253,24,0	1/1:1,6:6:11.78:73,12,0	0/0:16,0:16:48.04:0,48,606	0/1:2,0:2:6.99:7,0,14	0/1:7,7:13:99:297,0,100	./.	0/0:4,0:3:5.93:0,6,40	0/0:3,0:3:5.92:0,6,39	0/1:4,7:11:5.30:55,0,5	0/0:6,0:4:2.96:0,3,19	0/1:4,8:11:34.14:85,0,34	0/1:3,7:8:15.98:47,0,16	0/1:2,1:3:31.01:52,0,31	0/1:4,3:7:77.40:77,0,139	0/1:3,7:10:10.94:87,0,11	1/1:2,3:3:3.01:48,3,0	1/1:1,5:6:5.95:66,6,0	0/0:1,7:8:2.84:0,3,20	1/1:3,8:9:5.91:38,6,0	1/1:0,8:8:8.76:51,9,0	0/0:27,0:27:81.19:0,81,1055	0/0:20,0:20:54.18:0,54,753	0/0:11,0:11:33.06:0,33,396
chr10	6452904	.	G	GC	215.89	PASS	AC=10;AF=0.455;AN=22;BaseQRankSum=4.217;DP=209;FS=2.817;HRun=0;HaplotypeScore=39.8509;InbreedingCoeff=0.7595;MQ=74.55;MQ0=75;MQRankSum=-2.325;QD=16.61;ReadPosRankSum=1.311;VQSLOD=5.1070;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:23,0:15:29.08:0,29,361	0/0:29,0:16:33.71:0,34,384	./.	./.	./.	0/0:29,0:18:48.16:0,48,663	./.	./.	./.	1/1:0,2:2:6.02:71,6,0	./.	./.	./.	./.	./.	./.	1/1:1,3:1:3.01:35,3,0	./.	./.	1/1:0,1:1:3.01:36,3,0	1/1:0,1:1:3.01:36,3,0	1/1:0,5:5:12.04:149,12,0	./.	0/0:26,0:23:69.23:0,69,959	0/0:25,2:23:21.75:0,22,715	0/0:14,1:14:39.12:0,39,528
chr10	6454115	.	CGTGTGTGT	C	3056.65	PASS	AB=0.806;AC=29;AF=0.580;AN=50;BaseQRankSum=5.728;DP=594;FS=1.609;HRun=0;HaplotypeScore=193.5867;InbreedingCoeff=0.4063;MQ=55.57;MQ0=16;MQRankSum=-5.625;QD=7.94;ReadPosRankSum=1.476;VQSLOD=2.8654;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:31,7:36:10.21:123,0,10	0/1:6,2:7:66.03:66,0,73	./.	./.	0/0:10,1:9:3.01:0,3,44	1/1:24,1:26:12.02:190,12,0	1/1:19,6:24:2.95:71,3,0	0/0:29,0:28:9.03:0,9,158	1/1:18,3:25:14.67:318,15,0	0/0:17,0:22:27:0,27,384	0/1:13,0:17:17.13:17,0,97	1/1:10,0:19:12.04:223,12,0	1/1:16,0:26:15.52:271,16,0	1/1:18,0:29:24.08:444,24,0	1/1:10,12:23:15.05:356,15,0	1/1:10,12:23:21.07:506,21,0	0/1:15,5:22:38.44:136,0,38	0/1:15,0:18:3.87:4,0,75	0/0:11,0:11:0.89:0,1,3	1/1:11,6:17:8.92:166,9,0	0/0:37,0:39:15.01:0,15,159	1/1:15,4:19:9.03:206,9,0	./.	1/1:20,0:28:2.97:56,3,0	1/1:10,4:14:2.61:75,3,0	0/0:18,0:21:24.08:0,24,559	0/0:17,0:17:23.11:0,23,421	0/0:4,0:4:3.01:0,3,65
chr10	6455169	.	C	CT	7457.15	PASS	AB=0.604;AC=30;AF=0.536;AN=56;BaseQRankSum=-8.879;DP=720;FS=1.899;HRun=11;HaplotypeScore=77.1706;InbreedingCoeff=0.8778;MQ=72.93;MQ0=2;MQRankSum=0.245;QD=16.61;ReadPosRankSum=4.298;VQSLOD=5.8113;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,3:58:71.74:437,72,0	0/0:7,0:8:13.97:0,14,99	0/0:22,0:20:9.15:0,9,178	0/0:11,0:10:15.84:0,16,92	0/0:29,0:29:62.66:0,63,483	1/1:1,20:21:48.10:487,48,0	1/1:3,25:28:27.86:464,28,0	0/0:40,0:41:88.54:0,89,664	1/1:6,16:22:42.06:413,42,0	0/0:34,0:34:80.65:0,81,625	0/0:22,0:22:56.65:0,57,428	1/1:4,19:24:46.14:509,46,0	1/1:5,17:22:27.39:302,27,0	1/1:4,29:33:51.87:698,52,0	1/1:7,26:33:69.14:700,69,0	1/1:6,33:39:66.17:831,66,0	1/1:9,36:45:78.15:792,78,0	0/0:15,0:15:32.78:0,33,253	1/1:3,10:14:32.84:301,33,0	0/1:8,16:24:8.76:347,0,9	0/0:27,0:27:77.70:0,78,603	0/1:6,11:17:2.19:162,0,2	1/1:3,16:19:25.37:246,25,0	1/1:6,24:31:52.02:555,52,0	1/1:3,15:18:21.04:213,21,0	0/0:25,0:25:53.54:0,54,404	0/0:26,0:26:56.65:0,57,431	0/0:11,0:11:26.89:0,27,209
chr10	6455773	.	AACAC	A	842.40	PASS	AB=0.800;AC=27;AF=0.563;AN=48;BaseQRankSum=2.985;DP=440;FS=1.273;HRun=0;HaplotypeScore=83.8459;InbreedingCoeff=0.4444;MQ=46.94;MQ0=27;MQRankSum=1.026;QD=4.03;ReadPosRankSum=-1.154;VQSLOD=1.8238;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:29:3.01:0,3,66	0/0:2,0:3:6.02:0,6,127	./.	./.	0/0:7,0:7:3.01:0,3,70	1/1:7,5:12:3.01:47,3,0	1/1:20,1:21:5.98:67,6,0	0/0:17,0:13:3.01:0,3,56	1/1:6,3:9:9.03:139,9,0	0/0:11,0:8:12.04:0,12,258	0/0:17,0:12:3.01:0,3,52	1/1:6,0:6:3:28,3,0	1/1:11,4:15:6.02:93,6,0	1/1:17,1:19:3:28,3,0	1/1:10,1:15:9.02:102,9,0	0/1:12,4:15:10.55:170,0,11	1/1:16,1:16:3.01:46,3,0	0/0:16,0:15:21.07:0,21,430	0/0:11,0:10:3.01:0,3,58	1/1:8,0:8:2.80:13,3,0	0/0:38,0:33:24.04:0,24,385	1/1:4,4:8:3.01:46,3,0	0/0:12,0:11:0:0,0,0	1/1:27,3:28:9.03:139,9,0	1/1:10,1:13:3:28,3,0	./.	1/1:12,2:11:3.01:46,3,0	./.
chr10	6456835	.	TAC	T	19620.92	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=-0.234;DP=1039;FS=5.469;HRun=0;HaplotypeScore=181.9345;InbreedingCoeff=0.9998;MQ=59.07;MQ0=4;MQRankSum=2.945;QD=31.14;ReadPosRankSum=5.316;VQSLOD=5.9218;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,45:52:99:1433,106,0	0/0:13,0:13:30.10:0,30,519	0/0:18,0:12:30.07:0,30,472	0/0:38,0:28:60.18:0,60,977	0/0:24,0:24:63.22:0,63,1090	1/1:0,19:19:54.18:719,54,0	1/1:9,26:35:87.29:1157,87,0	0/0:43,0:41:99:0,105,1761	1/1:4,37:41:93.29:1221,93,0	0/0:41,0:41:99:0,102,1699	0/0:27,0:27:72.20:0,72,1163	1/1:4,39:43:99:1397,105,0	1/1:2,41:44:99:1517,114,0	1/1:8,37:45:93.31:1238,93,0	1/1:7,45:52:99:1860,141,0	1/1:12,30:42:95.54:1384,96,0	1/1:8,43:51:90.66:1379,91,0	0/0:33,0:33:82.94:0,83,1404	1/1:13,11:24:48.12:584,48,0	1/1:6,23:28:72.24:958,72,0	0/0:103,0:103:99:0,247,4249	1/1:7,36:43:99:1354,102,0	1/1:0,28:28:84.28:1118,84,0	1/1:2,54:56:99:1478,111,0	1/1:2,24:25:63.19:824,63,0	0/0:37,0:37:99:0,105,1822	0/0:19,0:19:51.17:0,51,883	0/0:13,0:13:30.07:0,30,486
chr10	6456908	.	A	AACACACAC	7197.39	PASS	AB=0.636;AC=20;AF=0.357;AN=56;BaseQRankSum=-0.517;DP=940;FS=0.000;HRun=0;HaplotypeScore=286.8548;InbreedingCoeff=0.3838;MQ=58.33;MQ0=3;MQRankSum=-3.549;QD=17.02;ReadPosRankSum=-4.638;VQSLOD=2.4680;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,108,2613	0/1:3,0:16:16.88:257,0,17	0/0:34,0:21:26.92:0,27,414	0/0:36,0:22:38.98:0,39,491	1/1:8,0:25:13.60:286,14,0	0/1:12,0:21:22.42:22,0,328	0/0:8,0:30:68.72:0,69,503	1/1:23,5:29:36.06:668,36,0	0/0:16,0:43:38.57:0,39,429	1/1:15,0:49:98.94:894,99,0	0/1:7,0:22:36.06:270,0,36	0/0:32,0:33:57.14:0,57,1288	0/0:33,0:34:78.19:0,78,1673	0/0:40,0:44:93.20:0,93,2254	0/1:14,0:42:35.55:36,0,385	0/0:10,0:35:72.26:0,72,566	0/0:18,0:42:29.39:0,29,420	0/1:10,0:28:64.52:249,0,65	0/0:14,0:22:25.83:0,26,199	0/0:8,0:33:32.28:0,32,408	0/1:23,0:63:3.92:416,0,4	0/1:20,0:39:53.75:54,0,544	0/0:31,0:31:55.83:0,56,1354	0/0:44,0:48:77.33:0,77,2323	0/1:10,0:15:44.39:44,0,67	1/1:11,16:36:81.26:2487,81,0	1/1:6,11:20:36.12:1349,36,0	1/1:7,2:11:6.02:164,6,0
chr10	6457391	.	GGGAAGGAAGGAAGGAAGGAA	G	12526.17	PASS	AB=0.685;AC=27;AF=0.482;AN=56;BaseQRankSum=4.378;DP=669;FS=5.917;HRun=0;HaplotypeScore=294.1422;InbreedingCoeff=0.5601;MQ=53.87;MQ0=31;MQRankSum=-6.475;QD=28.86;ReadPosRankSum=4.874;VQSLOD=2.6556;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:18,14:30:8.86:334,9,0	0/0:6,0:6:9.03:0,9,705	0/0:19,0:13:9.03:0,9,187	0/0:16,0:12:3.01:0,3,60	0/0:11,0:17:33.11:0,33,1863	1/1:14,11:25:9.03:481,9,0	1/1:21,0:20:6.01:150,6,0	0/0:18,0:17:18.06:0,18,721	0/1:9,14:21:17.78:940,0,18	0/0:24,0:23:39.13:0,39,2472	0/0:8,0:12:21.07:0,21,1215	0/1:13,14:27:6.97:939,0,7	1/1:8,16:24:30.10:1566,30,0	1/1:12,14:26:33.11:1763,33,0	0/1:17,14:31:99:783,0,116	1/1:12,12:24:12.04:641,12,0	0/1:22,19:38:13.98:135,0,14	0/0:16,0:22:30.10:0,30,2045	1/1:20,13:27:33.08:1202,33,0	1/1:16,17:32:36.12:1607,36,0	0/0:16,0:27:60.19:0,60,4140	1/1:15,14:27:21.07:828,21,0	1/1:10,14:23:10.85:631,11,0	0/1:17,7:22:46.74:47,0,234	1/1:9,8:17:9.03:479,9,0	0/0:16,0:27:50.96:0,51,1632	0/0:17,0:28:29.84:0,30,960	0/0:7,0:5:9:0,9,230
chr10	6457409	.	GA	G	740.42	PASS	AB=0.956;AC=9;AF=0.161;AN=56;BaseQRankSum=13.838;DP=591;FS=1.415;HRun=2;HaplotypeScore=130.7016;InbreedingCoeff=-0.1926;MQ=48.11;MQ0=35;MQRankSum=-8.064;QD=3.67;ReadPosRankSum=9.723;VQSLOD=-0.4090;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:23:0.74:1,0,166	0/0:9,0:7:18.05:0,18,239	0/0:18,0:8:23.56:0,24,279	0/0:14,0:10:27.02:0,27,331	0/0:18,0:16:48.05:0,48,592	0/0:18,0:18:4.11:0,4,163	0/1:11,14:24:99:423,0,293	0/0:16,1:16:48.15:0,48,654	0/1:19,0:17:12.63:13,0,76	0/0:30,0:27:78.22:0,78,1045	0/0:15,0:14:36.02:0,36,431	0/0:24,0:24:5.39:0,5,306	0/1:20,0:20:59.19:59,0,99	0/1:22,0:22:22.04:22,0,185	0/0:27,0:27:20.89:0,21,429	0/0:20,0:20:9.48:0,9,300	0/0:28,0:26:20.89:0,21,257	0/0:16,0:17:42.05:0,42,529	0/1:26,1:20:99:190,0,209	0/1:29,0:28:96.87:97,0,428	0/0:35,0:33:90.19:0,90,1098	0/1:23,0:22:61.76:62,0,307	0/0:22,0:22:6.22:0,6,238	0/0:16,0:14:14.92:0,15,167	0/1:13,0:13:3.08:3,0,139	0/0:31,0:28:52.24:0,52,637	0/0:19,0:19:19.86:0,20,293	0/0:11,0:8:19.68:0,20,272
chr10	6458088	.	ATCTGTCTG	A	18487.45	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=14.684;DP=741;FS=0.786;HRun=0;HaplotypeScore=218.7863;InbreedingCoeff=0.9908;MQ=67.39;MQ0=0;MQRankSum=-14.809;QD=36.11;ReadPosRankSum=0.258;VQSLOD=4.5162;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:15,21:36:25.80:692,26,0	0/0:9,0:9:24.07:0,24,901	0/0:31,0:31:33.11:0,33,1091	0/0:20,0:19:27.09:0,27,923	0/0:40,0:40:81.28:0,81,3278	1/1:6,14:20:30.10:766,30,0	1/1:6,16:22:33.11:847,33,0	1/1:28,20:48:60.21:1408,60,0	1/1:10,17:27:45.15:1156,45,0	0/0:42,0:42:99:0,105,4164	0/0:16,0:16:45.15:0,45,1821	1/1:7,18:25:33.11:848,33,0	1/1:12,18:30:48.16:1229,48,0	1/1:9,19:28:42.14:1079,42,0	1/1:14,22:36:51.18:1299,51,0	1/1:4,17:21:42.14:1079,42,0	1/1:7,6:13:12.04:308,12,0	0/0:28,0:28:57.20:0,57,2344	1/1:7,12:19:36.12:925,36,0	1/1:8,22:31:48.16:1212,48,0	0/0:43,0:43:90.31:0,90,3650	1/1:4,17:21:21.07:539,21,0	1/1:9,20:29:33.11:847,33,0	1/1:4,14:18:19.42:465,19,0	1/1:8,23:31:51.17:1272,51,0	1/1:7,14:21:39.13:976,39,0	1/1:6,20:26:42.14:1079,42,0	1/1:2,8:10:18.06:462,18,0
chr10	6459950	.	C	CACACAG	7099.96	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=2.315;DP=748;FS=14.439;HRun=0;HaplotypeScore=187.2059;InbreedingCoeff=0.0707;MQ=50.74;MQ0=18;MQRankSum=-0.989;QD=12.12;ReadPosRankSum=5.107;VQSLOD=2.8256;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:51,0:51:99:349,0,158	0/0:8,0:8:19.56:0,20,253	0/1:53,0:16:19.20:19,0,152	0/0:43,0:15:31:0,31,279	0/0:20,0:20:32.93:0,33,325	0/1:28,0:28:20.90:283,0,21	0/1:35,0:35:4.74:383,0,5	0/1:33,0:33:2.01:2,0,292	1/1:17,0:17:0.07:212,0,0	0/0:19,0:19:38.56:0,39,334	0/0:18,0:17:38.13:0,38,303	1/1:5,20:26:12.53:688,13,0	1/1:12,26:39:52.75:1403,53,0	1/1:4,13:19:12.33:441,12,0	0/1:23,0:21:10.03:240,0,10	0/1:25,0:25:48.82:145,0,49	0/1:37,0:35:54.42:512,0,54	0/0:26,0:24:47.08:0,47,480	0/1:18,0:16:31.80:179,0,32	0/1:15,0:14:33.45:111,0,33	0/0:28,0:26:35.95:0,36,350	1/1:29,0:29:34.96:323,35,0	1/1:25,1:26:47.84:763,48,0	1/1:8,24:37:15.05:412,15,0	1/1:23,0:23:9.03:232,9,0	0/1:23,0:22:38.10:38,0,306	0/1:19,0:18:63.86:184,0,64	0/1:10,0:10:71.83:182,0,72
chr10	6459952	.	C	CACAG	5639.77	PASS	AB=0.999;AC=26;AF=0.464;AN=56;BaseQRankSum=3.846;DP=748;FS=10.859;HRun=0;HaplotypeScore=171.6311;InbreedingCoeff=0.0124;MQ=50.48;MQ0=19;MQRankSum=-0.339;QD=10.24;ReadPosRankSum=7.152;VQSLOD=2.9335;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:51,1:52:71.55:519,0,72	0/0:7,0:7:19.83:0,20,215	0/1:53,0:16:19.15:19,0,152	0/0:43,0:16:31:0,31,279	0/0:21,0:21:37.24:0,37,311	0/1:29,0:29:55.75:177,0,56	0/1:34,0:34:6.54:429,0,7	0/0:30,0:30:36.12:0,36,412	0/1:18,0:18:26.49:179,0,26	0/0:19,0:19:43.56:0,44,354	0/0:19,0:17:38.60:0,39,314	1/1:24,1:25:12.63:460,13,0	1/1:34,2:36:51.90:1017,52,0	0/1:19,0:19:4:225,0,4	0/1:24,0:22:16.18:192,0,16	0/1:26,0:26:47.93:145,0,48	0/1:38,0:36:75.43:342,0,75	0/0:28,0:26:46.91:0,47,451	0/1:17,0:15:66.06:156,0,66	0/1:15,0:14:32.44:87,0,32	0/0:29,0:26:35.93:0,36,324	1/1:29,0:29:21.38:285,21,0	1/1:24,3:27:12.30:632,12,0	1/1:35,1:36:14.04:305,14,0	1/1:22,0:22:9.03:161,9,0	0/1:22,0:21:37.88:38,0,294	0/1:19,0:18:85.77:135,0,86	0/1:10,0:10:71.81:135,0,72
chr10	6459954	.	C	CAG	3815.11	PASS	AB=0.961;AC=22;AF=0.393;AN=56;BaseQRankSum=4.050;DP=739;FS=10.015;HRun=0;HaplotypeScore=164.0385;InbreedingCoeff=-0.0653;MQ=49.41;MQ0=18;MQRankSum=-1.056;QD=7.61;ReadPosRankSum=8.641;VQSLOD=1.6726;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:16,35:51:10.93:815,0,11	0/0:7,0:7:19.56:0,20,175	0/1:47,0:15:16.44:16,0,185	0/0:42,0:15:34:0,34,304	0/0:21,0:21:36.63:0,37,288	0/1:30,0:30:70.42:70,0,81	0/1:33,0:33:24.17:341,0,24	0/0:31,0:31:72.86:0,73,564	0/1:17,0:17:22.67:143,0,23	0/0:20,0:20:44.68:0,45,358	0/0:19,0:17:38.28:0,38,287	0/1:25,0:25:15.19:220,0,15	1/1:35,1:36:6.24:452,6,0	0/1:19,0:19:48.06:106,0,48	0/1:23,0:21:29.97:161,0,30	0/1:26,0:26:72.93:117,0,73	0/1:38,0:36:99:254,0,126	0/0:27,0:26:49.95:0,50,425	0/1:17,0:15:82.39:104,0,82	0/1:16,0:15:33.43:87,0,33	0/0:29,0:26:35.68:0,36,311	1/1:27,0:27:16.63:248,17,0	0/1:25,2:27:18.96:420,0,19	1/1:33,0:33:20.09:188,20,0	1/1:22,0:22:8.38:73,8,0	0/0:25,0:24:42.59:0,43,351	0/0:16,0:16:0.99:0,1,95	0/1:10,0:10:0.13:0,0,78
chr10	6459981	.	ACGC	A	1338.67	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=4.557;DP=665;FS=4.457;HRun=0;HaplotypeScore=185.1346;InbreedingCoeff=0.9104;MQ=58.65;MQ0=23;MQRankSum=-3.957;QD=12.75;ReadPosRankSum=0.973;VQSLOD=3.4343;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:95.69:0,96,1064	1/1:3,4:5:9.03:145,9,0	0/0:29,0:22:62.19:0,62,1166	0/0:33,0:19:54.19:0,54,1082	1/1:4,10:13:14.58:182,15,0	0/0:22,0:22:51.79:0,52,378	0/0:33,0:33:52.21:0,52,330	0/0:34,0:34:92.93:0,93,1523	0/0:17,0:17:28.85:0,29,217	1/1:1,17:17:36.12:607,36,0	1/1:10,8:14:12.04:198,12,0	0/0:24,0:24:49.62:0,50,482	0/0:30,0:30:66.25:0,66,794	0/0:18,0:18:41.65:0,42,349	0/0:22,0:20:28.63:0,29,194	0/0:23,0:23:25.78:0,26,151	0/0:40,0:38:78.69:0,79,606	1/1:6,16:19:10.69:264,11,0	0/0:19,0:18:46.87:0,47,305	0/0:19,0:19:29.08:0,29,181	1/1:9,15:18:8.41:117,8,0	0/0:29,0:29:37.34:0,37,272	0/0:23,0:24:52.13:0,52,444	0/0:31,0:31:37.08:0,37,326	0/0:19,0:19:30.74:0,31,220	0/0:20,1:20:1.31:0,1,890	0/0:14,0:13:33.11:0,33,621	0/0:10,0:10:24.08:0,24,457
chr10	6459982	.	CG	C	434.55	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=5.974;DP=646;FS=7.422;HRun=1;HaplotypeScore=171.3878;InbreedingCoeff=0.9357;MQ=59.07;MQ0=22;MQRankSum=-3.301;QD=4.39;ReadPosRankSum=1.555;VQSLOD=0.2589;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:92.52:0,93,510	1/1:5,2:5:6.96:23,7,0	0/0:29,0:22:60.20:0,60,915	0/0:28,1:19:54.18:0,54,850	1/1:11,3:12:8.70:74,9,0	0/0:22,0:22:51.38:0,51,286	0/0:33,0:33:50.30:0,50,268	0/0:31,0:31:77.94:0,78,1117	0/0:17,0:17:28.71:0,29,167	1/1:17,1:17:34.70:304,35,0	1/1:12,4:11:8.33:45,8,0	0/0:24,0:24:47.57:0,48,260	0/0:30,0:30:65.03:0,65,396	0/0:17,0:17:43.06:0,43,245	0/0:22,0:20:28.44:0,28,154	0/0:22,0:22:25.13:0,25,121	0/0:40,0:38:77.93:0,78,467	1/1:17,4:18:15.78:102,16,0	0/0:18,0:17:46.45:0,46,240	0/0:20,0:20:28.51:0,29,140	1/1:19,4:17:8.16:59,8,0	0/0:27,0:27:36.64:0,37,196	0/0:24,0:24:48.41:0,48,258	0/0:30,0:30:37.05:0,37,209	0/0:19,0:19:31.59:0,32,182	0/0:21,0:20:41.33:0,41,635	0/0:13,0:12:33.03:0,33,432	0/0:10,0:10:24.06:0,24,306
chr10	6460506	.	A	AT	15636.59	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=-1.980;DP=686;FS=5.305;HRun=2;HaplotypeScore=100.1454;InbreedingCoeff=0.9976;MQ=80.82;MQ0=0;MQRankSum=-3.975;QD=38.99;ReadPosRankSum=2.145;VQSLOD=4.9199;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,39:40:99:1469,102,0	0/0:10,0:10:27.08:0,27,334	0/0:21,0:21:44.64:0,45,511	0/0:22,0:22:54.05:0,54,621	0/0:32,0:32:93.28:0,93,1140	1/1:1,21:22:66.22:951,66,0	1/1:1,15:16:45.15:648,45,0	0/0:26,0:26:72.23:0,72,893	1/1:1,29:30:81.27:1166,81,0	0/0:31,0:31:87.27:0,87,1079	0/0:18,0:18:54.16:0,54,657	1/1:1,25:26:72.24:1037,72,0	1/1:1,17:18:45.15:648,45,0	1/1:1,30:31:87.29:1253,87,0	1/1:1,29:30:78.26:1123,78,0	1/1:0,22:22:63.21:907,63,0	1/1:0,30:30:87.29:1253,87,0	0/0:20,0:20:57.18:0,57,707	1/1:2,30:32:93.31:1339,93,0	1/1:1,18:19:54.10:732,54,0	0/0:37,0:37:99:0,111,1362	1/1:1,16:17:45.15:648,45,0	1/1:0,27:27:75.25:1080,75,0	1/1:1,23:24:48.16:691,48,0	1/1:1,16:17:48.16:691,48,0	0/0:29,0:29:87.27:0,87,1068	0/0:34,0:34:99:0,99,1215	0/0:5,0:5:15.05:0,15,186
chr10	6461450	.	AAC	A	14377.83	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=-8.068;DP=635;FS=3.437;HRun=0;HaplotypeScore=92.4386;InbreedingCoeff=0.9956;MQ=84.12;MQ0=3;MQRankSum=-1.022;QD=39.94;ReadPosRankSum=5.703;VQSLOD=7.0094;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,26:27:69.23:1016,69,0	0/0:4,0:4:12.04:0,12,214	0/0:19,0:19:54.18:0,54,962	0/0:22,0:21:54.18:0,54,939	0/0:20,0:20:60.19:0,60,1086	1/1:0,30:30:81.27:1193,81,0	1/1:0,24:24:66.22:972,66,0	0/0:41,0:41:99:0,114,2075	1/1:1,23:24:66.22:972,66,0	0/0:33,0:33:93.31:0,93,1712	0/0:26,0:26:66.21:0,66,1203	1/1:1,16:16:39.13:574,39,0	1/1:1,24:25:66.22:972,66,0	1/1:2,14:16:36.12:530,36,0	1/1:1,34:35:99:1458,99,0	1/1:0,18:18:54.18:795,54,0	1/1:2,18:20:54.18:795,54,0	0/0:14,0:14:39.13:0,39,730	1/1:0,21:21:63.21:926,63,0	1/1:0,35:34:99:1458,99,0	0/0:19,0:19:57.18:0,57,1022	1/1:0,15:15:45.11:639,45,0	1/1:1,21:22:57.19:839,57,0	1/1:0,13:12:36.12:530,36,0	1/1:1,17:18:48.16:707,48,0	0/0:35,0:35:99:0,99,1849	0/0:29,0:29:87.30:0,87,1612	0/0:13,0:13:36.12:0,36,674
chr10	6461929	.	TA	T	1059.92	PASS	AB=0.667;AC=11;AF=0.196;AN=56;BaseQRankSum=-3.745;DP=509;FS=3.874;HRun=14;HaplotypeScore=149.3472;InbreedingCoeff=0.8483;MQ=64.40;MQ0=1;MQRankSum=8.851;QD=9.64;ReadPosRankSum=7.739;VQSLOD=1.3062;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:20:39.69:0,40,237	0/1:4,2:8:16.89:36,0,17	0/0:20,0:12:11.07:0,11,103	0/0:9,0:9:5.87:0,6,35	1/1:6,19:26:27.63:324,28,0	0/0:14,0:20:40.30:0,40,226	0/0:9,0:9:20.30:0,20,116	0/0:8,0:25:46.21:0,46,269	0/0:15,0:19:34.25:0,34,174	1/1:6,10:17:31.72:208,32,0	1/1:8,19:27:19.64:278,20,0	0/0:11,0:11:17.17:0,17,92	0/0:13,0:16:34.73:0,35,198	0/0:16,0:16:34.69:0,35,196	0/0:9,0:10:25.95:0,26,144	0/0:14,0:18:35.66:0,36,208	0/0:15,0:19:30.02:0,30,174	1/1:6,13:19:35.60:244,36,0	0/0:25,0:25:52.08:0,52,303	0/0:29,0:29:60.61:0,61,335	1/1:2,10:13:22.84:148,23,0	0/0:16,0:22:59.82:0,60,361	0/0:15,0:18:29.13:0,29,172	0/0:8,0:8:12.04:0,12,73	0/0:18,0:19:41.72:0,42,237	0/0:11,0:25:48.93:0,49,290	0/0:7,0:25:34.46:0,34,212	0/0:1,0:13:22.87:0,23,123
chr10	6463800	.	CGT	C	188.69	PASS	AB=1.000;AC=17;AF=0.425;AN=40;BaseQRankSum=-0.711;DP=381;FS=2.409;HRun=0;HaplotypeScore=75.5614;InbreedingCoeff=0.6156;MQ=68.48;MQ0=27;MQRankSum=0.481;QD=1.72;ReadPosRankSum=-0.400;VQSLOD=1.4732;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:5.83:0,6,49	./.	./.	./.	./.	0/0:18,0:17:14.98:0,15,124	0/0:17,0:14:8.96:0,9,69	0/0:23,0:23:3.86:0,4,23	0/0:21,0:21:23.92:0,24,188	1/1:9,0:9:8.84:69,9,0	1/1:5,0:4:5.99:50,6,0	1/1:11,6:17:2.88:15,3,0	1/1:11,0:10:2.92:17,3,0	./.	0/0:16,0:16:17.96:0,18,145	0/0:8,0:8:8.98:0,9,73	0/0:22,0:21:18.37:0,18,154	1/1:9,0:7:5.45:43,5,0	./.	0/0:10,0:9:5.99:0,6,50	1/1:17,0:16:8.94:67,9,0	./.	1/1:4,0:4:2.99:23,3,0	1/1:21,0:18:5.98:47,6,0	0/0:6,0:5:8.98:0,9,74	0/1:17,0:15:4.21:4,0,113	0/0:21,0:20:23.64:0,24,160	./.
chr10	6463875	.	GAGAGAGAGAGAGA	G	282.09	PASS	AB=0.972;AC=7;AF=0.135;AN=52;BaseQRankSum=0.169;DP=342;FS=51.537;HRun=0;HaplotypeScore=95.1237;InbreedingCoeff=-0.0468;MQ=58.96;MQ0=56;MQRankSum=-1.080;QD=2.85;ReadPosRankSum=0.042;VQSLOD=-0.2755;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,14:20:6.02:76,6,0	0/0:4,0:2:6.02:0,6,111	0/0:25,0:10:25.30:0,25,280	0/0:47,0:17:33.97:0,34,424	0/0:6,0:4:3.01:0,3,33	0/0:12,0:9:11.83:0,12,195	0/1:15,0:14:12.75:30,0,13	0/0:18,0:18:49.70:0,50,649	0/0:15,0:13:3.90:0,4,49	0/0:6,0:2:6.02:0,6,96	0/0:5,0:4:3.01:0,3,64	0/0:9,0:7:12.04:0,12,367	0/0:10,0:5:3.48:0,3,127	0/0:6,0:5:3.48:0,3,134	0/0:11,0:11:3.48:0,3,61	0/0:5,0:5:5.95:0,6,80	0/1:25,0:18:89.18:89,0,341	0/1:10,0:7:45.11:135,0,45	0/1:6,0:4:8.75:9,0,48	./.	0/1:19,0:13:61.64:62,0,110	0/0:4,0:2:2.60:0,3,10	0/0:6,0:1:3.01:0,3,39	0/0:16,0:9:6.02:0,6,186	0/0:9,0:4:3.14:0,3,26	0/0:12,0:12:9.87:0,10,446	0/0:9,0:8:20.95:0,21,270	./.
chr10	6463879	.	GAGAGAGAGA	G	1268.29	PASS	AB=0.977;AC=26;AF=0.520;AN=50;BaseQRankSum=2.902;DP=342;FS=0.000;HRun=0;HaplotypeScore=82.4495;InbreedingCoeff=0.2400;MQ=67.87;MQ0=53;MQRankSum=-1.726;QD=6.75;ReadPosRankSum=6.062;VQSLOD=0.8975;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:17:6.02:76,6,0	0/1:4,0:2:3.91:4,0,21	0/0:30,0:15:15.51:0,16,367	0/0:49,0:19:44.72:0,45,510	1/1:3,3:4:2.92:17,3,0	0/1:10,1:8:2.17:182,0,2	1/1:13,1:12:5.95:56,6,0	0/0:22,0:22:54.01:0,54,754	1/1:6,9:13:3.01:38,3,0	1/1:8,0:2:3.84:21,4,0	0/0:2,3:4:2.88:0,3,15	0/1:9,0:7:0.82:1,0,175	0/0:7,0:3:3.01:0,3,76	0/0:6,0:5:3.01:0,3,66	0/1:8,1:9:2.10:33,0,2	0/0:3,2:5:2.50:0,2,9	0/1:26,0:18:35.10:298,0,35	0/1:11,0:7:3.01:137,0,3	1/1:9,0:5:11.43:134,11,0	./.	1/1:16,0:12:12.82:177,13,0	1/1:3,0:1:3:28,3,0	./.	0/0:17,0:9:5.91:0,6,84	1/1:9,0:4:9.01:127,9,0	0/1:11,0:11:85.50:85,0,91	0/1:9,0:8:7.15:7,0,128	./.
chr10	6463881	.	GAGAGAGA	G	2139.14	PASS	AB=1.000;AC=35;AF=0.700;AN=50;BaseQRankSum=3.142;DP=339;FS=0.774;HRun=0;HaplotypeScore=68.0636;InbreedingCoeff=0.2848;MQ=68.20;MQ0=53;MQRankSum=-2.064;QD=10.14;ReadPosRankSum=6.724;VQSLOD=0.7051;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:16:6.02:76,6,0	1/1:4,0:2:2.07:22,2,0	0/0:30,0:15:16.73:0,17,368	0/0:49,0:19:43.18:0,43,502	1/1:6,0:4:3.01:41,3,0	1/1:11,0:8:19.24:329,19,0	1/1:6,9:14:6.02:76,6,0	0/0:22,0:22:49.36:0,49,746	1/1:15,0:13:3.01:38,3,0	1/1:8,0:2:6.02:77,6,0	1/1:5,0:4:2.50:9,2,0	0/1:9,0:7:29.49:29,0,100	0/0:7,0:3:3.01:0,3,51	0/0:5,0:4:3.01:0,3,46	1/1:4,6:10:5.97:57,6,0	1/1:4,0:4:3.01:32,3,0	0/1:24,0:16:6.62:454,0,7	1/1:10,0:6:12.01:152,12,0	1/1:10,0:6:15.01:228,15,0	./.	1/1:15,0:11:18.04:277,18,0	1/1:3,0:1:3.01:48,3,0	./.	0/1:17,0:9:1.82:2,0,38	1/1:9,0:4:9.03:198,9,0	0/1:10,0:10:32.79:107,0,33	0/1:8,0:7:41.57:42,0,102	./.
chr10	6463887	.	GA	G	1513.92	PASS	AC=40;AF=0.769;AN=52;BaseQRankSum=3.019;DP=329;FS=0.000;HRun=2;HaplotypeScore=50.9130;InbreedingCoeff=0.6117;MQ=81.12;MQ0=44;MQRankSum=-1.989;QD=8.10;ReadPosRankSum=5.940;VQSLOD=0.8707;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:16,1:16:6.02:76,6,0	1/1:1,3:2:6:61,6,0	0/0:34,0:19:44.27:0,44,529	0/0:54,0:24:57.87:0,58,669	1/1:6,0:4:2.92:17,3,0	1/1:2,8:7:20.78:166,21,0	1/1:12,1:12:6.02:75,6,0	0/0:22,0:22:59.80:0,60,795	1/1:13,0:11:3.01:38,3,0	1/1:3,5:2:5.90:37,6,0	1/1:4,1:4:3:25,3,0	1/1:7,1:6:8.81:65,9,0	1/1:6,1:3:2.89:24,3,0	1/1:5,0:4:3:26,3,0	1/1:8,2:10:5.95:56,6,0	1/1:2,1:3:2.99:24,3,0	1/1:5,15:14:33.21:289,33,0	1/1:0,7:5:12.04:152,12,0	1/1:3,7:6:14.90:149,15,0	./.	1/1:5,11:13:23.94:251,24,0	1/1:1,1:1:2.98:22,3,0	./.	1/1:5,9:7:6.02:69,6,0	1/1:1,8:4:8.91:60,9,0	0/0:10,0:10:25.04:0,25,136	0/0:7,0:6:16.82:0,17,149	0/0:1,0:1:3.01:0,3,39
chr10	6463888	.	A	AG	1149.58	PASS	AC=40;AF=0.741;AN=54;BaseQRankSum=3.576;DP=326;FS=0.000;HRun=1;HaplotypeScore=53.6147;InbreedingCoeff=0.5869;MQ=81.45;MQ0=44;MQRankSum=-2.369;QD=6.25;ReadPosRankSum=4.968;VQSLOD=0.6057;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:16:6.02:76,6,0	1/1:3,1:2:4.99:25,5,0	0/0:34,0:19:42.51:0,43,514	0/0:54,0:24:57.69:0,58,666	1/1:4,2:4:1.82:5,2,0	1/1:9,1:7:13.12:75,13,0	1/1:13,0:12:6.02:75,6,0	0/0:22,0:22:59.24:0,59,799	1/1:11,2:11:3.01:38,3,0	1/1:5,3:2:2.80:7,3,0	1/1:4,1:4:1.55:4,2,0	1/1:1,6:5:7.15:99,7,0	1/1:2,5:3:2.91:48,3,0	1/1:0,4:3:3.01:48,3,0	1/1:10,0:10:4.26:41,4,0	1/1:3,0:3:1.25:3,1,0	1/1:17,2:13:23.96:184,24,0	1/1:7,0:5:12.04:152,12,0	1/1:8,2:6:14.36:135,14,0	0/0:4,2:4:0:0,0,0	1/1:16,0:13:19.97:201,20,0	1/1:1,1:1:2.97:20,3,0	./.	1/1:10,4:7:5.93:65,6,0	1/1:8,1:4:4.66:11,5,0	0/0:10,0:10:27.84:0,28,243	0/0:7,0:6:18.01:0,18,191	0/0:1,0:1:3.01:0,3,40
chr10	6464027	.	CAG	C	1136.65	PASS	AC=36;AF=0.720;AN=50;BaseQRankSum=-0.048;DP=144;FS=15.008;HRun=0;HaplotypeScore=25.8298;InbreedingCoeff=0.6009;MQ=84.85;MQ0=3;MQRankSum=-2.666;QD=14.96;ReadPosRankSum=-1.102;VQSLOD=1.3306;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,0:6:6.02:87,6,0	1/1:1,0:1:0.47:1,0,0	0/0:9,0:6:16.29:0,16,236	0/0:18,0:12:26.51:0,27,352	1/1:5,0:5:1.68:4,2,0	./.	1/1:3,0:3:9.02:113,9,0	0/0:12,0:12:36.12:0,36,636	1/1:4,0:4:3.01:44,3,0	1/1:8,0:8:5.09:18,5,0	1/1:2,0:2:0.94:2,1,0	./.	./.	1/1:2,0:2:3.01:44,3,0	1/1:1,0:1:3.01:44,3,0	1/1:3,0:3:6.02:89,6,0	1/1:21,0:21:18.04:181,18,0	0/0:13,0:13:6.94:0,7,120	1/1:2,0:2:3.01:45,3,0	1/1:3,0:3:9.03:133,9,0	1/1:4,0:4:0.94:2,1,0	1/1:2,0:2:6.02:89,6,0	1/1:3,0:3:9.03:133,9,0	1/1:1,0:1:3.01:44,3,0	1/1:5,0:5:15.05:223,15,0	0/0:4,0:4:12.04:0,12,212	0/0:2,0:2:6.02:0,6,99	0/0:3,0:3:9.02:0,9,110
chr10	6464028	.	AGAAT	A	1286.79	PASS	AB=1.000;AC=35;AF=0.700;AN=50;BaseQRankSum=-0.446;DP=137;FS=17.334;HRun=0;HaplotypeScore=29.9220;InbreedingCoeff=0.5526;MQ=86.27;MQ0=3;MQRankSum=-1.616;QD=18.38;ReadPosRankSum=-0.641;VQSLOD=1.2210;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:4:6.02:87,6,0	1/1:1,0:1:0.47:1,0,0	0/0:9,0:6:16.29:0,16,236	0/0:18,0:12:26.51:0,27,352	1/1:5,0:5:1.68:4,2,0	./.	1/1:3,0:3:9.02:113,9,0	0/0:12,0:12:36.12:0,36,636	1/1:2,0:2:3.01:44,3,0	1/1:8,0:8:5.09:18,5,0	1/1:2,0:2:0.94:2,1,0	./.	./.	1/1:1,0:1:3.01:44,3,0	1/1:1,0:1:3.01:44,3,0	1/1:3,0:3:6.02:89,6,0	1/1:0,18:20:18.06:338,18,0	0/0:13,0:13:9.93:0,10,239	0/1:2,0:2:19.41:39,0,19	1/1:3,0:3:9.03:133,9,0	1/1:4,0:4:0.94:2,1,0	1/1:2,0:2:6.02:89,6,0	1/1:3,0:3:9.03:133,9,0	1/1:1,0:1:3.01:44,3,0	1/1:5,0:5:15.05:223,15,0	0/0:4,0:4:12.04:0,12,212	0/0:2,0:2:6.02:0,6,99	0/0:3,0:3:6.93:0,7,63
chr10	6464344	.	G	GCTT	27080.76	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-11.660;DP=615;FS=14.490;HRun=0;HaplotypeScore=75.6469;InbreedingCoeff=0.9977;MQ=90.17;MQ0=0;MQRankSum=-7.377;QD=55.84;ReadPosRankSum=5.883;VQSLOD=5.9744;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,26:29:75.26:1674,75,0	1/1:0,9:9:21.07:469,21,0	0/0:33,0:33:84.24:0,84,1316	0/0:18,0:18:39.13:0,39,633	1/1:1,16:18:45.15:972,45,0	1/1:2,21:25:57.20:1272,57,0	1/1:2,33:36:90.27:1962,90,0	0/0:29,0:29:87.29:0,87,1399	1/1:5,22:27:66.19:1427,66,0	1/1:0,23:24:72.25:1584,72,0	1/1:1,8:9:27.05:554,27,0	1/1:0,17:18:45.15:1004,45,0	1/1:0,28:30:81.28:1808,81,0	1/1:1,25:27:72.25:1607,72,0	1/1:1,22:24:60.17:1294,60,0	1/1:3,31:34:96.22:2005,96,0	1/1:6,27:33:78.27:1742,78,0	1/1:0,14:15:39.13:871,39,0	1/1:4,22:27:72.25:1532,72,0	1/1:2,10:14:36.05:711,36,0	1/1:2,20:24:51.18:1138,51,0	1/1:2,13:16:45.07:910,45,0	1/1:0,7:7:21.07:469,21,0	1/1:2,23:25:54.19:1205,54,0	1/1:0,13:14:39.13:871,39,0	0/0:18,0:18:51.17:0,51,833	0/0:24,0:23:72.23:0,72,1146	0/0:8,0:8:24.08:0,24,392
chr10	6465517	.	TATG	T	14971.36	PASS	AB=0.923;AC=33;AF=0.589;AN=56;BaseQRankSum=18.588;DP=662;FS=10.076;HRun=0;HaplotypeScore=120.3666;InbreedingCoeff=0.9291;MQ=73.95;MQ0=0;MQRankSum=-1.303;QD=39.19;ReadPosRankSum=3.924;VQSLOD=5.8961;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,27:29:57.19:928,57,0	0/0:14,0:14:36.12:0,36,773	0/0:17,0:17:41.53:0,42,905	0/0:12,0:12:33.11:0,33,681	0/0:22,0:22:66.23:0,66,1471	1/1:0,22:22:57.19:928,57,0	1/1:2,25:27:54.18:886,54,0	0/0:34,0:34:96.33:0,96,2071	1/1:0,25:25:63.21:1038,63,0	0/0:34,0:34:99:0,99,2178	0/0:16,0:16:48.15:0,48,1004	1/1:0,30:30:81.23:1276,81,0	1/1:1,27:28:78.16:1285,78,0	1/1:2,15:17:42.14:699,42,0	1/1:1,20:21:48.05:768,48,0	1/1:0,23:23:57.19:937,57,0	1/1:4,21:25:57.19:949,57,0	0/1:11,1:12:13.84:14,0,663	1/1:3,14:17:42.14:691,42,0	1/1:1,19:20:57.16:909,57,0	0/0:44,0:44:99:0,126,2843	1/1:0,19:19:57.19:938,57,0	1/1:1,18:19:48.16:753,48,0	1/1:2,24:26:63.69:1038,64,0	1/1:1,21:22:60.20:935,60,0	0/0:35,0:35:99:0,102,2247	0/0:35,0:35:99:0,102,2269	0/0:17,0:17:48.13:0,48,983
chr10	6467089	.	TA	T	11998.16	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-2.379;DP=629;FS=2.864;HRun=10;HaplotypeScore=65.0975;InbreedingCoeff=0.9873;MQ=78.48;MQ0=1;MQRankSum=-5.343;QD=20.47;ReadPosRankSum=3.896;VQSLOD=5.8846;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,38:43:70.31:759,70,0	1/1:1,13:14:35.87:302,36,0	0/0:21,0:19:26.77:0,27,256	0/0:21,0:18:14.32:0,14,278	1/1:0,26:26:65.83:555,66,0	1/1:1,21:22:50.99:443,51,0	1/1:3,18:22:44.02:371,44,0	1/1:3,20:23:59.97:518,60,0	1/1:5,14:19:32.99:286,33,0	1/1:4,21:25:62.90:530,63,0	1/1:1,16:17:44.98:390,45,0	1/1:3,15:18:35.99:312,36,0	1/1:2,19:21:47.98:417,48,0	1/1:4,23:27:59.98:521,60,0	1/1:2,27:29:80.98:703,81,0	1/1:2,15:17:32.99:286,33,0	1/1:2,34:36:86.97:755,87,0	1/1:3,19:22:50.97:443,51,0	1/1:4,18:22:53.90:449,54,0	1/1:4,21:24:56.90:486,57,0	1/1:0,16:16:47.99:417,48,0	1/1:1,13:14:32.99:286,33,0	1/1:3,19:22:23.74:428,24,0	1/1:1,18:19:28.17:371,28,0	1/1:3,22:25:29.82:488,30,0	1/1:1,15:16:44.99:390,45,0	1/1:3,29:32:83.96:729,84,0	1/1:0,14:14:41.99:365,42,0
chr10	6467798	.	T	TC	728.66	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-4.041;DP=256;FS=3.689;HRun=0;HaplotypeScore=33.3193;InbreedingCoeff=0.5834;MQ=50.83;MQ0=19;MQRankSum=2.722;QD=10.41;ReadPosRankSum=0.440;VQSLOD=2.9403;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:4:5.93:0,6,40	0/0:6,0:4:12.01:0,12,108	0/0:28,0:7:14.16:0,14,152	0/0:17,0:7:10.65:0,11,70	0/0:20,0:19:20.99:0,21,276	0/0:4,0:3:8.90:0,9,60	0/0:5,0:4:8.79:0,9,69	1/1:4,16:18:46.90:323,47,0	0/0:3,0:3:8.79:0,9,56	0/0:12,0:10:21.74:0,22,185	0/0:8,0:8:5.81:0,6,139	0/0:6,0:4:5.65:0,6,32	0/0:2,0:2:2.98:0,3,21	0/0:1,0:1:2.98:0,3,21	0/0:6,0:6:11.89:0,12,82	0/0:4,0:4:11.90:0,12,84	0/0:7,0:5:8.96:0,9,76	0/0:20,0:18:41.33:0,41,318	0/0:10,0:6:14.95:0,15,117	0/0:2,0:1:2.97:0,3,20	0/0:3,0:3:9:0,9,84	0/0:5,0:3:8.93:0,9,63	0/0:1,0:1:2.97:0,3,20	0/0:4,0:2:2.98:0,3,22	0/0:6,0:1:0.47:0,0,1	1/1:5,16:19:52.95:427,53,0	1/1:10,13:16:8.10:56,8,0	1/1:4,2:5:7.54:66,8,0
chr10	6467825	.	C	CT	791.76	PASS	AB=1.000;AC=17;AF=0.607;AN=28;BaseQRankSum=-1.225;DP=195;FS=5.501;HRun=9;HaplotypeScore=37.4265;InbreedingCoeff=0.6930;MQ=35.09;MQ0=33;MQRankSum=0.942;QD=9.43;ReadPosRankSum=-0.534;VQSLOD=0.9493;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	1/1:4,2:4:8.98:87,9,0	./.	./.	1/1:13,5:18:11.95:108,12,0	./.	0/1:4,0:2:0:0,0,0	0/0:13,0:9:17.63:0,18,146	./.	1/1:6,7:12:23.98:238,24,0	1/1:3,3:5:9.02:99,9,0	0/0:5,0:1:3:0,3,26	./.	./.	./.	./.	1/1:5,0:3:0.47:1,0,0	1/1:11,12:21:12.13:343,12,0	./.	./.	1/1:4,1:3:3.01:33,3,0	./.	./.	1/1:4,0:1:0.47:1,0,0	./.	0/0:11,0:9:11.96:0,12,101	0/0:18,0:12:11.72:0,12,103	0/0:16,0:12:26.25:0,26,223
chr10	6468010	.	T	TAG	5317.33	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=0.558;DP=381;FS=17.210;HRun=0;HaplotypeScore=56.1818;InbreedingCoeff=0.9739;MQ=78.57;MQ0=0;MQRankSum=1.895;QD=46.64;ReadPosRankSum=1.265;VQSLOD=4.1249;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:20:54.18:0,54,741	0/0:7,0:7:21.04:0,21,269	0/0:9,0:9:12.04:0,12,164	0/0:10,0:10:12:0,12,162	0/0:13,0:13:36.12:0,36,494	1/1:2,8:10:21.07:373,21,0	1/1:1,14:15:42.14:742,42,0	0/0:22,0:22:51.17:0,51,701	1/1:0,4:5:12.04:213,12,0	0/0:11,0:12:33.11:0,33,449	0/0:22,0:22:60.20:0,60,824	0/0:10,0:10:30.10:0,30,412	0/0:11,0:11:33.11:0,33,453	0/0:12,0:12:36.12:0,36,495	1/1:0,10:10:27.09:479,27,0	1/1:0,10:10:30.10:532,30,0	1/1:1,17:19:48.16:852,48,0	0/0:30,0:30:87.29:0,87,1196	1/1:3,18:22:60.18:1010,60,0	1/1:0,12:12:36.12:639,36,0	0/0:20,0:20:57.19:0,57,783	1/1:1,7:8:18.06:319,18,0	0/0:10,0:10:30.10:0,30,412	0/0:12,0:12:33.11:0,33,453	1/1:0,3:3:9.03:160,9,0	0/0:12,0:12:33.11:0,33,450	0/0:25,0:25:69.23:0,69,948	0/0:9,0:8:21.07:0,21,285
chr10	6468774	.	G	GTCTCTCTCCCC	8978.43	PASS	AB=0.992;AC=26;AF=0.464;AN=56;BaseQRankSum=6.106;DP=557;FS=16.360;HRun=0;HaplotypeScore=191.2395;InbreedingCoeff=0.5436;MQ=73.65;MQ0=2;MQRankSum=-11.399;QD=31.73;ReadPosRankSum=-4.040;VQSLOD=2.7356;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:50,0:50:99:801,0,330	0/0:13,0:13:39.11:0,39,1180	0/0:21,0:19:41.16:0,41,1055	0/0:25,0:22:60.13:0,60,1598	0/0:21,0:21:63.17:0,63,1843	1/1:6,7:14:18.06:687,18,0	1/1:7,13:21:21.03:600,21,0	0/0:29,0:29:78.25:0,78,2482	1/1:4,7:17:12.04:552,12,0	0/0:20,0:20:48.16:0,48,1647	0/0:16,0:16:48.16:0,48,1669	0/1:20,0:21:99:157,0,283	0/1:15,0:15:99:128,0,160	0/1:21,0:21:99:258,0,266	1/1:1,14:18:12.01:689,12,0	1/1:9,6:18:27.09:1144,27,0	1/1:1,7:9:9.03:518,9,0	0/0:13,0:13:39.13:0,39,1377	1/1:2,4:6:18.06:758,18,0	1/1:7,11:19:30.10:1076,30,0	0/0:34,0:33:93.30:0,93,2959	1/1:3,7:11:18.06:593,18,0	0/1:8,0:8:44.94:45,0,73	0/1:23,0:23:99:504,0,127	1/1:3,8:12:12.04:468,12,0	0/0:24,0:24:72.23:0,72,2305	0/0:36,0:36:99:0,108,3691	0/0:21,0:21:60.13:0,60,1813
chr10	6468779	.	TA	T	4938.07	PASS	AB=0.940;AC=19;AF=0.339;AN=56;BaseQRankSum=13.307;DP=536;FS=1.802;HRun=1;HaplotypeScore=95.4755;InbreedingCoeff=0.4321;MQ=72.23;MQ0=2;MQRankSum=-7.563;QD=22.97;ReadPosRankSum=3.817;VQSLOD=5.1169;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,45:45:99:1448,105,0	0/0:12,0:12:36.12:0,36,575	0/0:20,0:18:22.33:0,22,506	0/0:36,0:24:63.15:0,63,903	0/0:19,0:19:57.18:0,57,882	0/1:12,2:14:55.78:56,0,83	0/1:21,1:22:62.80:63,0,79	0/0:30,0:30:87.29:0,87,1359	0/0:12,0:12:2.03:0,2,5	0/0:18,0:18:54.18:0,54,863	0/0:18,0:18:54.18:0,54,851	1/1:0,19:20:60.20:833,60,0	1/1:0,12:12:27.09:376,27,0	1/1:0,20:20:57.19:786,57,0	0/1:15,0:15:15.34:21,0,15	0/0:16,0:16:28.06:0,28,173	0/0:9,0:9:11.89:0,12,62	0/0:14,0:14:41.93:0,42,636	0/1:6,0:6:45.62:73,0,46	0/1:13,3:16:19.81:133,0,20	0/0:33,0:32:90.31:0,90,1431	0/1:9,0:9:30.27:43,0,30	1/1:0,5:5:15.05:209,15,0	1/1:0,21:21:60.20:823,60,0	0/1:9,1:10:9.31:73,0,9	0/0:25,0:25:75.23:0,75,1151	0/0:36,0:36:99:0,108,1725	0/0:19,0:19:57.16:0,57,884
chr10	6469141	.	ATG	A	5822.05	PASS	AC=12;AF=0.261;AN=46;BaseQRankSum=13.931;DP=674;FS=0.728;HRun=0;HaplotypeScore=99.0399;InbreedingCoeff=0.9999;MQ=86.70;MQ0=1;MQRankSum=-0.976;QD=36.85;ReadPosRankSum=4.380;VQSLOD=7.1919;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,154,2821	1/1:2,12:14:32.85:459,33,0	0/0:27,0:27:52.93:0,53,1318	0/0:21,0:21:59:0,59,1042	1/1:1,32:32:81.27:1192,81,0	0/0:20,0:20:60.19:0,60,1072	0/0:26,0:26:75.24:0,75,1361	0/0:39,0:39:99:0,117,2131	0/0:39,0:39:99:0,111,1969	1/1:1,23:24:66.21:949,66,0	1/1:4,28:32:72.24:1059,72,0	./.	./.	./.	0/0:31,0:31:93.32:0,93,1740	0/0:33,0:33:99:0,99,1788	0/0:44,0:44:99:0,117,2145	1/1:0,16:16:39.13:574,39,0	0/0:21,0:21:60.19:0,60,1084	0/0:34,0:34:90.29:0,90,1651	1/1:1,38:39:99:1589,108,0	0/0:35,0:35:99:0,99,1807	./.	./.	0/0:21,0:21:57.17:0,57,982	0/0:29,1:30:43.12:0,43,1524	0/0:21,0:21:63.22:0,63,1161	0/0:21,0:20:63.20:0,63,1146
chr10	6470169	.	T	TAACAAC	13679.17	PASS	AB=0.583;AC=29;AF=0.630;AN=46;BaseQRankSum=6.786;DP=528;FS=7.042;HRun=0;HaplotypeScore=161.8077;InbreedingCoeff=0.8999;MQ=60.58;MQ0=2;MQRankSum=-7.505;QD=38.97;ReadPosRankSum=-3.409;VQSLOD=3.3646;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:20,10:30:36.09:1032,36,0	0/0:8,0:8:15.04:0,15,277	0/0:22,0:18:30.10:0,30,512	0/0:22,0:19:14.39:0,14,397	0/0:21,0:21:39.13:0,39,820	1/1:13,9:21:51.15:1332,51,0	1/1:26,8:34:60:1324,60,0	1/1:15,0:32:39.10:288,39,0	1/1:7,11:18:42.14:1263,42,0	0/0:26,0:26:50.74:0,51,1005	0/0:26,0:26:51.15:0,51,995	./.	./.	./.	1/1:9,15:25:45.14:1345,45,0	1/1:5,9:14:36.12:1046,36,0	1/1:14,6:20:38.94:955,39,0	0/0:33,0:33:69.78:0,70,1401	1/1:15,4:17:15.03:485,15,0	1/1:9,8:17:39.13:1020,39,0	0/0:19,0:19:48.10:0,48,884	1/1:10,17:29:44.91:1188,45,0	./.	./.	1/1:17,10:27:57.17:1572,57,0	0/1:6,0:21:15.59:264,0,16	1/1:7,0:26:41.38:261,41,0	1/1:7,0:17:44.51:304,45,0
chr10	6470236	.	C	CTG	5826.46	PASS	AB=0.831;AC=21;AF=0.457;AN=46;BaseQRankSum=0.426;DP=485;FS=6.009;HRun=0;HaplotypeScore=151.9262;InbreedingCoeff=0.7785;MQ=68.45;MQ0=0;MQRankSum=-9.035;QD=24.28;ReadPosRankSum=-2.251;VQSLOD=5.1253;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:9,20:29:27.08:423,27,0	0/0:10,0:10:24.04:0,24,274	0/0:16,0:15:14.04:0,14,118	0/1:10,0:9:8.08:8,0,30	0/0:20,0:20:51.15:0,51,630	1/1:9,15:23:39.13:643,39,0	1/1:10,14:24:30.09:467,30,0	0/0:24,0:24:50.74:0,51,537	1/1:4,10:14:30.10:497,30,0	0/0:31,0:31:74.35:0,74,865	0/0:20,0:20:45.13:0,45,551	./.	./.	./.	1/1:9,8:17:24.08:398,24,0	1/1:7,5:12:14.98:217,15,0	1/1:6,16:22:42.06:637,42,0	0/0:35,0:35:84.13:0,84,1019	0/1:13,2:15:1.78:414,0,2	0/1:9,15:25:18.52:736,0,19	0/0:24,0:24:54.17:0,54,680	1/1:10,12:22:39.13:643,39,0	./.	./.	1/1:12,14:26:48.14:745,48,0	0/0:24,0:24:57.06:0,57,670	0/0:17,0:17:41.96:0,42,459	0/0:24,0:24:52.94:0,53,684
chr10	6470272	.	AC	A	713.19	PASS	AB=1.000;AC=14;AF=0.292;AN=48;BaseQRankSum=8.720;DP=540;FS=1.963;HRun=1;HaplotypeScore=171.4488;InbreedingCoeff=0.2976;MQ=62.76;MQ0=1;MQRankSum=-11.392;QD=3.29;ReadPosRankSum=3.811;VQSLOD=0.3562;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,28:33:49.90:566,50,0	0/0:10,0:10:19.10:0,19,118	0/0:6,0:6:9.93:0,10,78	0/0:9,0:8:2.03:0,2,64	0/0:32,0:32:52.67:0,53,161	0/1:29,0:29:14.15:14,0,51	0/0:20,0:20:2:0,2,33	0/0:36,0:35:57.95:0,58,230	1/1:14,0:14:7.52:51,8,0	0/0:36,0:36:58.48:0,58,244	0/0:29,0:29:52.89:0,53,207	./.	./.	./.	1/1:12,0:12:2.61:33,3,0	0/1:13,0:13:6.03:13,0,6	0/1:26,0:26:18.10:18,0,58	0/0:30,0:30:61.60:0,62,244	0/1:19,0:19:3.30:3,0,59	0/1:25,0:25:33.52:34,0,65	0/0:26,0:26:44.16:0,44,139	1/1:17,0:17:11.50:82,12,0	./.	0/0:1,0:1:1.82:0,2,5	0/1:29,0:29:23.05:50,0,23	0/0:33,0:33:72.74:0,73,232	0/0:30,0:30:34.98:0,35,157	0/0:25,0:25:37.95:0,38,229
chr10	6470274	.	GC	G	16827.27	PASS	AB=0.838;AC=46;AF=0.958;AN=48;BaseQRankSum=-4.417;DP=533;FS=5.689;HRun=2;HaplotypeScore=103.9817;InbreedingCoeff=-0.0444;MQ=63.98;MQ0=1;MQRankSum=0.266;QD=31.57;ReadPosRankSum=3.072;VQSLOD=4.4345;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:33,0:33:41.78:542,42,0	1/1:3,7:10:21.07:269,21,0	0/1:6,1:7:20.95:21,0,53	0/1:6,2:8:28.83:108,0,29	1/1:1,30:31:84.27:1090,84,0	1/1:1,27:28:51.15:646,51,0	1/1:2,18:20:42.14:545,42,0	1/1:3,33:35:99:1270,99,0	1/1:0,14:14:39.13:505,39,0	1/1:0,37:37:99:1410,111,0	1/1:1,27:28:72.23:935,72,0	./.	./.	./.	1/1:0,12:12:27.09:349,27,0	1/1:0,13:13:24.08:311,24,0	1/1:3,20:23:57.12:704,57,0	1/1:0,28:28:81.26:1052,81,0	1/1:1,19:20:51.14:633,51,0	1/1:2,22:24:60.17:748,60,0	1/1:1,25:26:66.21:857,66,0	1/1:1,17:18:51.15:646,51,0	./.	1/1:0,1:1:3.01:39,3,0	1/1:1,29:30:78.25:1010,78,0	1/1:0,34:34:99:1310,102,0	1/1:0,28:28:84.27:1088,84,0	1/1:3,21:24:57.18:740,57,0
chr10	6471089	.	T	TCACA	5624.97	PASS	AB=0.989;AC=15;AF=0.268;AN=56;BaseQRankSum=-11.663;DP=881;FS=3.651;HRun=0;HaplotypeScore=182.5041;InbreedingCoeff=0.7049;MQ=64.07;MQ0=5;MQRankSum=-0.039;QD=21.23;ReadPosRankSum=-0.252;VQSLOD=4.7157;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:61.01:0,61,569	1/1:3,9:12:24.97:573,25,0	0/0:48,0:23:12.83:0,13,292	0/0:39,0:32:22.54:0,23,326	1/1:6,10:17:29.84:666,30,0	0/1:28,0:27:9.95:10,0,508	0/0:23,0:23:16.13:0,16,387	0/0:29,0:31:44.96:0,45,610	0/0:32,0:32:62.89:0,63,737	1/1:17,14:33:50.88:1085,51,0	1/1:9,19:28:44.64:1029,45,0	0/0:28,0:28:63.99:0,64,707	0/0:38,0:38:80.09:0,80,964	0/0:34,0:34:57.26:0,57,871	0/0:35,0:35:63.28:0,63,951	0/1:34,0:34:18.63:19,0,750	0/0:38,0:38:81.18:0,81,937	1/1:20,17:38:47.90:1094,48,0	0/0:26,0:26:10.14:0,10,326	0/0:24,0:24:12.15:0,12,360	1/1:17,23:42:48.15:1115,48,0	0/0:43,0:43:7.93:0,8,773	0/0:30,0:30:36.30:0,36,434	0/0:32,0:32:55.21:0,55,825	0/0:36,0:36:72.17:0,72,829	0/1:28,1:29:34.20:34,0,849	0/0:24,0:24:57.19:0,57,929	0/0:7,0:7:18.06:0,18,296
chr10	6473418	.	C	CGAT	4758.51	PASS	AB=1.000;AC=41;AF=0.759;AN=54;BaseQRankSum=-7.889;DP=777;FS=0.000;HRun=0;HaplotypeScore=248.7086;InbreedingCoeff=0.0365;MQ=56.13;MQ0=7;MQRankSum=5.798;QD=6.99;ReadPosRankSum=-3.361;VQSLOD=3.5713;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:53,0:53:13.03:13,0,13	1/1:3,1:4:6.01:79,6,0	0/0:42,0:29:65.87:0,66,683	0/0:41,0:34:92.95:0,93,1075	1/1:12,3:16:20.88:165,21,0	1/1:27,0:27:1.24:122,1,0	0/1:28,0:28:5.26:86,0,5	1/1:48,0:48:57.90:500,58,0	0/1:29,0:29:12.21:155,0,12	1/1:14,2:16:32.36:403,32,0	1/1:9,1:10:12.01:147,12,0	0/1:29,0:29:12.40:54,0,12	0/1:38,0:38:13.18:116,0,13	0/1:42,0:42:13.95:114,0,14	0/1:39,0:39:26.30:85,0,26	0/1:30,0:30:21.64:27,0,22	0/1:33,0:33:0.73:112,0,1	1/1:16,7:24:65.69:788,66,0	1/1:15,0:14:11.53:118,12,0	1/1:9,0:9:2.05:42,2,0	1/1:51,2:54:23.77:192,24,0	1/1:11,0:11:3.30:37,3,0	1/1:17,0:17:5.99:49,6,0	1/1:50,0:50:2.93:45,3,0	./.	1/1:23,8:31:27.17:606,27,0	1/1:2,17:20:21.07:409,21,0	1/1:5,3:8:15.05:295,15,0
chr10	6473424	.	TGACGAC	T	4669.08	PASS	AB=0.619;AC=29;AF=0.518;AN=56;BaseQRankSum=6.161;DP=791;FS=6.842;HRun=0;HaplotypeScore=280.6291;InbreedingCoeff=0.7319;MQ=52.09;MQ0=8;MQRankSum=-8.233;QD=10.15;ReadPosRankSum=6.326;VQSLOD=2.0499;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:9,44:53:29.67:631,30,0	0/0:4,0:4:3.90:0,4,79	0/0:42,0:29:38.65:0,39,491	0/0:43,0:33:21.16:0,21,642	0/0:20,0:19:14.82:0,15,128	1/1:15,0:26:16.26:124,16,0	0/1:15,0:27:28.70:224,0,29	0/0:51,0:51:99:0,117,1552	1/1:14,0:28:24.05:204,24,0	0/0:18,0:18:38.48:0,38,513	0/0:10,0:10:12.48:0,12,148	1/1:7,19:27:36.12:793,36,0	1/1:8,28:36:33.58:727,34,0	1/1:7,35:42:41.65:894,42,0	1/1:12,0:38:38.56:364,39,0	1/1:16,0:29:40.77:415,41,0	1/1:11,0:32:12.54:44,13,0	0/0:25,0:25:43.42:0,43,806	1/1:12,0:15:20.63:147,21,0	1/1:6,0:10:4.23:14,4,0	0/0:55,0:54:23.83:0,24,270	1/1:3,0:16:1.17:3,1,0	0/1:2,14:16:0:0,0,1	1/1:12,40:52:2.17:65,2,0	0/1:5,0:12:11.99:19,0,12	0/0:34,0:34:76.15:0,76,1244	0/0:20,0:20:26.69:0,27,429	0/0:9,0:9:24.08:0,24,413
chr10	6473439	.	C	CGACGAT	3104.85	PASS	AB=0.966;AC=28;AF=0.500;AN=56;BaseQRankSum=-5.795;DP=765;FS=29.427;HRun=0;HaplotypeScore=288.4672;InbreedingCoeff=-0.4218;MQ=43.92;MQ0=8;MQRankSum=3.659;QD=4.70;ReadPosRankSum=-3.692;VQSLOD=1.0802;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:49,0:49:43.23:43,0,144	0/1:4,1:5:1.88:122,0,2	0/0:42,0:25:56.58:0,57,497	0/0:37,0:27:60.98:0,61,643	1/1:14,3:16:10.07:192,10,0	0/1:20,0:20:2.86:3,0,168	0/1:25,0:26:99:103,0,144	0/1:52,0:52:99:216,0,651	0/1:25,0:25:86.03:86,0,202	0/1:19,1:20:50.66:543,0,51	1/1:5,1:13:6.44:47,6,0	0/1:21,0:21:30.49:30,0,164	0/1:32,0:32:62.38:62,0,184	0/1:40,0:40:73.94:74,0,248	0/1:38,0:38:14.42:14,0,390	0/1:30,0:30:26.98:27,0,347	0/1:27,0:27:43.76:44,0,120	1/1:15,6:21:54.41:987,54,0	0/1:23,0:22:99:149,0,113	0/1:9,0:9:13.56:43,0,14	0/1:9,37:68:15.98:16,0,34	0/0:14,0:14:2.66:0,3,25	0/1:17,0:17:5.83:34,0,6	0/1:46,0:46:16.46:16,0,43	0/0:12,0:12:5.68:0,6,28	0/1:34,0:34:99:212,0,303	1/1:17,0:17:8.14:147,8,0	0/1:9,0:9:49.36:54,0,49
chr10	6473708	.	AGTTAT	A	2528.56	PASS	AC=6;AF=0.111;AN=54;BaseQRankSum=8.649;DP=339;FS=28.173;HRun=0;HaplotypeScore=67.6610;InbreedingCoeff=0.9788;MQ=97.28;MQ0=0;MQRankSum=-4.768;QD=60.20;ReadPosRankSum=0.944;VQSLOD=1.5396;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:39.13:0,39,1231	0/0:4,0:4:12.04:0,12,388	0/0:29,0:29:67.63:0,68,2211	0/0:20,0:20:50.35:0,50,1547	0/0:10,0:10:30.10:0,30,963	0/0:11,0:11:30.06:0,30,892	0/0:14,0:14:42.12:0,42,1283	1/1:0,14:14:42.13:871,42,0	0/0:11,0:11:33.11:0,33,1060	0/0:15,0:15:45.15:0,45,1447	0/0:7,0:7:18.05:0,18,513	0/0:8,0:8:24.08:0,24,770	0/0:7,0:7:21.07:0,21,672	0/0:15,0:15:45.15:0,45,1419	0/0:9,0:9:27.09:0,27,872	0/0:18,0:18:54.17:0,54,1634	0/0:11,0:11:33.07:0,33,988	0/0:6,0:6:18.06:0,18,538	0/0:10,0:10:27.09:0,27,752	0/0:13,0:13:39.13:0,39,1209	0/0:18,0:18:54.19:0,54,1744	0/0:11,0:11:33.11:0,33,1066	0/0:9,0:9:27.09:0,27,872	0/0:20,0:20:60.19:0,60,1828	0/0:8,0:8:24.08:0,24,776	1/1:0,13:13:39.13:863,39,0	1/1:0,15:15:42.14:936,42,0	./.
chr10	6474508	.	G	GA	17420.54	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-7.064;DP=667;FS=12.295;HRun=8;HaplotypeScore=59.5191;InbreedingCoeff=0.9956;MQ=83.43;MQ0=0;MQRankSum=-7.850;QD=27.78;ReadPosRankSum=3.632;VQSLOD=4.6506;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,31:35:87.26:1004,87,0	1/1:0,12:12:36.11:415,36,0	0/0:23,0:23:36.19:0,36,291	0/0:17,0:17:21.57:0,22,247	1/1:4,16:20:48.10:539,48,0	1/1:2,27:29:78.23:900,78,0	1/1:1,17:18:48.14:554,48,0	1/1:8,27:35:81.68:914,82,0	1/1:5,14:19:36.11:415,36,0	1/1:5,22:27:66.14:742,66,0	1/1:1,19:20:57.13:643,57,0	1/1:5,23:28:69.21:796,69,0	1/1:5,27:32:62.50:850,63,0	1/1:2,15:17:39.12:450,39,0	1/1:2,19:21:48.14:554,48,0	1/1:4,11:16:32.96:361,33,0	1/1:3,18:21:51.15:589,51,0	1/1:0,30:30:87.26:1004,87,0	1/1:6,22:28:75.14:834,75,0	1/1:5,15:20:45.10:505,45,0	1/1:3,18:21:48.14:554,48,0	1/1:3,27:31:84.05:935,84,0	1/1:5,18:23:51.15:589,51,0	1/1:4,20:24:54.16:623,54,0	1/1:4,25:29:38.74:700,39,0	1/1:5,23:28:72.17:807,72,0	1/1:3,28:31:78.23:900,78,0	1/1:4,8:12:21.06:242,21,0
chr10	6474807	.	GGAGCCTTCAACC	G	6727.75	PASS	AB=0.524;AC=7;AF=0.125;AN=56;BaseQRankSum=13.090;DP=654;FS=1.004;HRun=0;HaplotypeScore=228.5874;InbreedingCoeff=0.8358;MQ=86.44;MQ0=0;MQRankSum=-10.294;QD=83.06;ReadPosRankSum=1.131;VQSLOD=4.4649;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,135,7982	0/0:11,0:11:33.11:0,33,1975	0/0:24,0:24:58.46:0,58,3416	0/0:33,0:33:96.29:0,96,4729	0/0:14,0:14:42.11:0,42,2282	0/0:17,0:17:51.15:0,51,2897	0/0:26,0:26:78.26:0,78,4595	1/1:0,20:20:54.89:1558,55,0	0/0:25,0:25:75.24:0,75,4580	0/0:20,0:20:60.20:0,60,3402	0/0:18,0:18:54.17:0,54,3263	0/0:15,0:15:45.14:0,45,2620	0/0:25,0:25:75.22:0,75,4134	0/0:27,0:27:81.25:0,81,4537	0/0:27,0:27:81.25:0,81,4401	0/0:25,0:25:75.24:0,75,4449	0/0:30,0:30:90.29:0,90,5142	0/0:10,0:10:30.10:0,30,1808	0/0:28,0:28:84.28:0,84,4377	0/0:17,0:17:51.18:0,51,3150	0/0:61,0:61:99:0,181,10495	0/0:13,0:13:39.12:0,39,2121	0/0:23,0:23:69.22:0,69,3836	0/0:15,0:15:45.11:0,45,2647	0/0:23,0:23:69.22:0,69,4052	0/1:2,20:22:99:1784,0,315	1/1:0,26:26:63.22:2438,63,0	1/1:0,13:13:24.08:947,24,0
chr10	6475192	.	A	AACAC	5145.82	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-6.870;DP=579;FS=6.856;HRun=0;HaplotypeScore=108.6791;InbreedingCoeff=0.9268;MQ=47.93;MQ0=49;MQRankSum=-1.009;QD=33.41;ReadPosRankSum=2.927;VQSLOD=4.7166;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:17,29:41:65.96:1552,66,0	0/0:10,0:8:18.05:0,18,279	0/0:24,0:13:24.08:0,24,404	0/0:27,0:16:21.04:0,21,325	0/0:17,0:11:12.46:0,12,171	0/0:18,0:18:39.13:0,39,661	0/0:21,0:19:27.09:0,27,457	0/0:8,0:9:18.02:0,18,167	0/0:28,0:28:51.03:0,51,812	0/0:21,0:17:42.11:0,42,660	0/0:13,0:9:6.01:0,6,77	1/1:9,19:24:42.14:1046,42,0	1/1:4,12:18:30.10:743,30,0	1/1:6,9:14:21.07:523,21,0	0/0:25,0:26:36.11:0,36,588	0/0:20,0:20:54.18:0,54,916	0/0:27,0:25:60.21:0,60,1014	0/0:19,0:19:45.15:0,45,763	0/0:24,0:19:38.85:0,39,648	0/0:14,0:13:24.08:0,24,407	0/0:32,0:24:24.05:0,24,374	0/0:14,0:12:15.05:0,15,254	1/1:2,5:8:14.79:310,15,0	1/1:6,27:21:38.72:972,39,0	0/0:11,0:11:27.01:0,27,389	0/0:4,0:19:51.04:0,51,491	0/0:7,0:16:27.03:0,27,249	0/0:1,0:2:3:0,3,28
chr10	6476371	.	AT	A	10291.08	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=6.082;DP=713;FS=4.356;HRun=8;HaplotypeScore=123.9194;InbreedingCoeff=0.9999;MQ=83.62;MQ0=0;MQRankSum=-1.447;QD=24.80;ReadPosRankSum=5.620;VQSLOD=3.6319;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,34:39:99:956,99,0	0/0:11,0:11:33.09:0,33,387	0/0:29,0:28:59.53:0,60,661	0/0:29,0:29:35.93:0,36,517	0/0:33,0:33:93.25:0,93,1083	1/1:0,19:19:48.08:464,48,0	1/1:2,25:27:66.11:637,66,0	0/0:31,0:31:78.21:0,78,911	1/1:2,25:27:66.10:638,66,0	0/0:33,0:33:91.52:0,92,1085	0/0:22,0:22:63.19:0,63,761	1/1:1,29:30:81.13:782,81,0	1/1:1,15:16:39.06:377,39,0	1/1:1,19:20:54.09:521,54,0	1/1:0,29:29:78.13:754,78,0	1/1:2,27:29:75.12:724,75,0	1/1:1,24:25:66.11:637,66,0	0/0:20,0:20:54.17:0,54,651	1/1:3,21:24:65.83:614,66,0	1/1:1,19:20:51.08:493,51,0	0/0:29,0:29:75.17:0,75,859	1/1:2,28:30:78.12:753,78,0	1/1:1,30:31:87.01:840,87,0	1/1:4,25:29:60.09:579,60,0	1/1:1,19:20:54.09:521,54,0	0/0:17,0:17:51.15:0,51,606	0/0:26,0:25:69.19:0,69,810	0/0:18,0:18:48.15:0,48,580
chr10	6476671	.	AT	A	14056.94	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=5.236;DP=668;FS=17.995;HRun=7;HaplotypeScore=109.2246;InbreedingCoeff=0.9979;MQ=80.06;MQ0=0;MQRankSum=-3.356;QD=26.13;ReadPosRankSum=4.513;VQSLOD=3.4404;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,34:36:99:1010,99,0	1/1:3,7:10:18.04:183,18,0	0/0:17,0:16:45.13:0,45,535	0/0:19,0:18:35.07:0,35,366	1/1:4,29:33:81.18:825,81,0	1/1:3,24:27:66.15:673,66,0	1/1:1,30:31:87.20:888,87,0	0/0:32,0:32:87.28:0,87,1095	1/1:0,18:18:54.12:551,54,0	1/1:2,26:28:75.15:759,75,0	1/1:2,24:26:72.16:735,72,0	1/1:6,26:32:72.15:734,72,0	1/1:4,19:23:51.05:520,51,0	1/1:2,27:29:75.17:765,75,0	1/1:1,20:21:48.11:490,48,0	1/1:1,13:14:39.09:398,39,0	1/1:1,27:28:69.15:704,69,0	1/1:1,8:9:24.05:245,24,0	1/1:5,12:17:39.09:398,39,0	1/1:1,18:19:48.04:477,48,0	1/1:2,33:35:87.20:888,87,0	1/1:2,29:31:87.20:887,87,0	1/1:0,22:22:57.13:581,57,0	1/1:1,29:30:78.18:796,78,0	1/1:1,18:19:54.12:551,54,0	0/0:19,0:19:48.15:0,48,602	0/0:29,0:29:84.26:0,84,1039	0/0:14,0:14:42.13:0,42,528
chr10	6477884	.	C	CCCGAGGGA	2344.31	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-7.393;DP=593;FS=0.826;HRun=0;HaplotypeScore=145.3028;InbreedingCoeff=0.9566;MQ=90.12;MQ0=0;MQRankSum=-4.704;QD=36.07;ReadPosRankSum=-1.275;VQSLOD=3.3816;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:57.20:0,57,1468	0/0:11,0:11:21.07:0,21,546	0/0:24,0:24:30.07:0,30,674	0/0:26,0:26:33.06:0,33,757	0/0:21,0:21:36.12:0,36,869	0/0:21,0:21:42.14:0,42,1093	0/0:24,0:24:66.20:0,66,1553	1/1:16,2:22:12.02:277,12,0	0/0:22,0:22:45.15:0,45,1114	0/0:16,0:16:33.11:0,33,859	0/0:11,0:11:21.07:0,21,517	0/0:14,0:14:36.11:0,36,855	0/0:19,0:19:48.16:0,48,1248	0/0:22,0:22:42.13:0,42,1039	0/0:28,0:28:69.21:0,69,1712	0/0:20,0:20:27.09:0,27,698	0/0:24,0:24:60.21:0,60,1561	0/0:21,0:21:45.15:0,45,1160	0/0:18,0:18:33.09:0,33,717	0/0:17,0:17:33.11:0,33,829	0/0:47,0:47:99:0,117,2882	0/0:21,0:21:45.14:0,45,1080	0/0:19,0:19:33.11:0,33,830	0/0:34,0:34:72.22:0,72,1817	0/0:19,0:19:36.12:0,36,895	1/1:6,10:17:30.10:1087,30,0	1/1:9,8:20:21.07:878,21,0	1/1:2,2:6:6.02:252,6,0
chr10	6479743	.	T	TA	11138.07	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-16.006;DP=758;FS=4.561;HRun=4;HaplotypeScore=64.9824;InbreedingCoeff=0.9992;MQ=88.46;MQ0=0;MQRankSum=-3.798;QD=36.40;ReadPosRankSum=3.975;VQSLOD=5.1118;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,39:41:99:1559,114,0	1/1:0,7:7:21.07:287,21,0	0/0:26,0:26:69.19:0,69,779	0/0:31,0:31:81.11:0,81,882	1/1:1,24:25:69.23:940,69,0	0/0:27,0:27:78.20:0,78,873	0/0:30,0:30:84.24:0,84,953	0/0:37,0:37:99:0,99,1114	0/0:19,0:19:57.16:0,57,646	1/1:3,26:29:78.24:1049,78,0	1/1:2,21:23:60.11:779,60,0	1/1:0,21:21:54.18:739,54,0	1/1:2,31:33:90.30:1231,90,0	1/1:0,25:25:63.21:862,63,0	0/0:41,0:41:99:0,120,1352	0/0:34,0:34:96.27:0,96,1089	0/0:24,0:24:72.19:0,72,805	1/1:0,15:15:36.12:492,36,0	0/0:23,0:23:63.17:0,63,706	0/0:32,0:32:93.27:0,93,1055	1/1:1,32:33:84.28:1149,84,0	0/0:23,0:23:63.16:0,63,704	1/1:0,29:28:84.28:1149,84,0	1/1:1,24:25:66.22:903,66,0	0/0:23,0:23:63.17:0,63,706	0/0:35,2:37:26.20:0,26,1067	0/0:33,0:33:90.26:0,90,1020	0/0:12,0:11:36.10:0,36,408
chr10	6483756	.	GACACACAT	G	7076.71	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=12.863;DP=810;FS=1.786;HRun=0;HaplotypeScore=235.4094;InbreedingCoeff=0.9930;MQ=70.78;MQ0=0;MQRankSum=-11.406;QD=45.07;ReadPosRankSum=-0.947;VQSLOD=4.5156;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,138,5722	1/1:0,15:15:32.66:782,33,0	0/0:18,0:17:35.26:0,35,1305	0/0:22,0:22:58.82:0,59,1738	1/1:1,42:43:63.51:1447,64,0	0/0:25,0:25:75.21:0,75,2966	0/0:33,0:33:99:0,99,4084	0/0:39,0:39:99:0,111,4272	0/0:35,0:35:99:0,99,4057	1/1:1,32:33:96.24:2527,96,0	1/1:1,25:26:54.14:1414,54,0	0/0:30,0:30:87.25:0,87,3424	0/0:34,0:34:99:0,99,4085	0/0:33,0:33:96.33:0,96,4228	0/0:31,0:31:84.26:0,84,3378	0/0:32,0:32:93.30:0,93,3754	0/0:27,0:27:78.22:0,78,2968	1/1:1,13:14:24.04:614,24,0	0/0:27,0:27:78.25:0,78,2991	0/0:38,0:38:99:0,111,4531	1/1:6,20:26:12.04:293,12,0	0/0:31,0:31:92.52:0,93,3777	0/0:26,0:26:78.25:0,78,3123	0/0:25,0:25:72.21:0,72,2822	0/0:11,0:11:30.10:0,30,1325	0/0:37,1:38:29.53:0,30,4500	0/0:36,0:36:99:0,105,4163	0/0:13,0:13:39.12:0,39,1599
chr10	6484174	.	CA	C	11293.19	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=15.418;DP=689;FS=2.000;HRun=5;HaplotypeScore=70.4767;InbreedingCoeff=0.9885;MQ=76.25;MQ0=0;MQRankSum=-1.120;QD=30.28;ReadPosRankSum=4.999;VQSLOD=5.2922;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,147,1975	1/1:0,10:10:30.09:340,30,0	0/0:13,0:13:7.32:0,7,200	0/0:15,0:15:34.88:0,35,387	1/1:2,24:26:69.20:782,69,0	1/1:2,15:17:42.12:476,42,0	1/1:1,15:16:39.11:442,39,0	0/0:31,0:31:90.28:0,90,1204	1/1:1,21:22:57.16:646,57,0	1/1:2,31:33:93.19:1019,93,0	1/1:0,25:25:66.19:748,66,0	0/0:30,0:30:90.27:0,90,1199	0/0:21,0:21:63.21:0,63,859	0/0:19,0:19:54.18:0,54,738	1/1:0,25:25:72.21:817,72,0	1/1:0,20:20:57.16:646,57,0	1/1:0,22:22:60.17:680,60,0	1/1:1,23:24:57.16:646,57,0	1/1:2,15:17:45.13:510,45,0	1/1:0,28:28:81.23:918,81,0	1/1:0,27:27:75.21:851,75,0	1/1:1,38:39:99:1123,99,0	0/0:33,0:33:90.29:0,90,1216	0/0:35,0:35:99:0,99,1352	1/1:1,21:22:57.16:647,57,0	0/0:23,0:23:66.21:0,66,890	0/0:24,0:24:69.20:0,69,911	0/0:18,0:18:54.17:0,54,723
chr10	6485124	.	G	GTCTGCCTCATCT	17038.93	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=-2.198;DP=729;FS=1.707;HRun=0;HaplotypeScore=315.1751;InbreedingCoeff=0.8901;MQ=80.71;MQ0=0;MQRankSum=-14.705;QD=89.21;ReadPosRankSum=-4.104;VQSLOD=3.1661;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,108,3189	1/1:9,3:13:21.07:890,21,0	0/0:30,0:30:57.16:0,57,1786	0/0:18,0:18:18.09:0,18,730	1/1:22,21:43:93.10:4687,93,0	0/0:28,0:28:72.25:0,72,2435	0/0:22,0:22:57.20:0,57,1843	0/0:38,0:37:72.23:0,72,2240	0/0:23,0:23:63.22:0,63,2017	1/1:29,14:47:99:5417,120,0	1/1:16,12:29:63.09:3178,63,0	0/0:16,0:16:48.16:0,48,1686	0/0:20,0:20:54.19:0,54,1902	0/0:27,0:27:69.24:0,69,2344	0/0:34,0:34:87.30:0,87,2850	0/0:18,0:18:45.15:0,45,1578	0/0:35,0:35:90.31:0,90,3024	1/1:13,3:16:25.65:1722,26,0	0/0:22,0:22:48.13:0,48,1237	0/0:39,0:39:99:0,108,3745	1/1:10,4:15:18.06:1075,18,0	0/0:19,0:19:45.15:0,45,1394	0/0:28,0:28:75.24:0,75,2561	0/0:20,0:20:54.14:0,54,1822	0/0:32,0:32:81.28:0,81,2799	0/1:28,0:28:70.02:70,0,2318	0/0:24,0:24:54.17:0,54,1774	0/0:5,0:5:12.04:0,12,403
chr10	6486933	.	G	GC	24546.77	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-6.096;DP=695;FS=9.478;HRun=3;HaplotypeScore=68.5791;InbreedingCoeff=0.9970;MQ=76.71;MQ0=1;MQRankSum=-7.311;QD=37.88;ReadPosRankSum=5.214;VQSLOD=4.6640;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,23:24:69.23:965,69,0	1/1:0,8:8:21.07:294,21,0	0/0:22,0:21:42.13:0,42,503	0/0:22,1:17:24.92:0,25,357	1/1:0,29:29:87.29:1212,87,0	1/1:0,29:29:81.27:1134,81,0	1/1:1,26:27:72.24:1008,72,0	1/1:1,25:26:75.22:1016,75,0	1/1:1,26:27:78.26:1092,78,0	1/1:4,23:27:69.21:934,69,0	1/1:0,28:28:81.18:1106,81,0	1/1:2,24:26:72.24:1005,72,0	1/1:2,26:28:69.23:966,69,0	1/1:3,24:27:63.21:882,63,0	1/1:2,18:20:57.18:782,57,0	1/1:0,27:27:78.26:1091,78,0	1/1:1,32:33:90.30:1257,90,0	1/1:0,18:17:51.17:714,51,0	1/1:1,21:22:63.21:882,63,0	1/1:0,21:21:57.15:776,57,0	1/1:1,21:22:60.20:840,60,0	1/1:0,16:16:45.15:630,45,0	1/1:3,30:33:75.18:1025,75,0	1/1:1,25:26:69.23:966,69,0	1/1:5,28:33:81.27:1134,81,0	1/1:1,29:30:87.27:1199,87,0	1/1:0,29:28:81.27:1134,81,0	1/1:0,12:12:36.12:504,36,0
chr10	6488835	.	TCCCACCTGGTCACCTGCACCTGGAACCCGTGTC	T	1159.22	PASS	AB=0.962;AC=25;AF=0.781;AN=32;BaseQRankSum=-1.888;DP=423;FS=13.901;HRun=0;HaplotypeScore=207.5406;InbreedingCoeff=0.0363;MQ=41.12;MQ0=86;MQRankSum=4.663;QD=4.53;ReadPosRankSum=0.772;VQSLOD=1.5779;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:19:6.96:7,0,29	./.	./.	./.	1/1:14,0:12:2.99:23,3,0	1/1:10,0:9:6:126,6,0	./.	./.	1/1:18,0:17:2.99:24,3,0	0/0:20,0:14:8.89:0,9,127	./.	0/1:16,0:16:0:0,0,0	1/1:6,0:5:2.99:24,3,0	1/1:26,0:25:9.01:165,9,0	0/1:18,0:16:18.98:19,0,101	1/1:18,0:17:2.96:19,3,0	1/1:12,0:11:11.99:213,12,0	./.	./.	1/1:7,5:10:6.02:77,6,0	1/1:30,0:23:14.80:222,15,0	./.	./.	0/1:19,0:16:89.91:90,0,133	./.	0/1:13,4:12:99:144,0,214	1/1:15,0:13:11.94:116,12,0	./.
chr10	6488930	.	GTGTTCCCACCTGGTCACCTGCACTTGGAGCCTGTGCTTCCCACCTGGTCACCTGCACCTGGAACCCA	G	2013.83	PASS	AB=0.905;AC=10;AF=0.192;AN=52;BaseQRankSum=-0.510;DP=268;FS=14.470;HRun=0;HaplotypeScore=303.5958;InbreedingCoeff=-0.0970;MQ=41.86;MQ0=43;MQRankSum=-2.659;QD=17.67;ReadPosRankSum=0.310;VQSLOD=0.9215;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:14,0:11:99:389,0,2126	0/0:5,0:3:6.02:0,6,575	./.	./.	0/0:4,0:3:3.01:0,3,253	0/0:8,0:5:11.07:0,11,775	0/0:5,0:4:3.28:0,3,432	1/1:12,0:8:7.82:77,8,0	0/0:9,0:7:18.06:0,18,1446	0/0:8,0:6:15.05:0,15,1289	0/0:5,0:2:6.02:0,6,592	0/0:11,0:10:30.10:0,30,2689	0/1:8,0:7:90.66:91,0,1345	0/0:10,0:9:24.08:0,24,2097	0/0:10,0:8:17.92:0,18,1497	0/0:11,0:11:33.11:0,33,2650	0/1:13,0:13:99:184,0,2234	0/1:9,0:8:99:159,0,1634	0/1:5,10:11:99:290,0,193	0/1:3,4:7:23.11:23,0,496	0/1:24,0:19:99:606,0,2826	0/0:4,0:4:12.04:0,12,890	0/0:4,2:5:8.70:0,9,605	0/1:12,0:12:99:335,0,2173	0/0:5,0:2:6.02:0,6,487	0/0:9,0:7:18.06:0,18,1606	0/0:4,0:4:12.04:0,12,1163	0/0:3,0:3:9.03:0,9,779
chr10	6489627	.	AG	A	27122.09	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-4.378;DP=752;FS=16.492;HRun=1;HaplotypeScore=78.8406;InbreedingCoeff=0.9999;MQ=93.11;MQ0=0;MQRankSum=-12.926;QD=39.42;ReadPosRankSum=7.947;VQSLOD=2.7429;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,44:44:99:1594,114,0	1/1:0,11:11:33.11:458,33,0	0/0:35,0:35:99:0,102,1524	0/0:29,0:29:81.01:0,81,1184	1/1:0,22:22:63.21:881,63,0	1/1:0,21:21:63.21:881,63,0	1/1:0,28:28:75.25:1049,75,0	1/1:0,38:38:99:1434,105,0	1/1:0,27:27:75.25:1049,75,0	1/1:0,28:28:84.28:1175,84,0	1/1:0,21:21:63.21:881,63,0	1/1:0,26:26:75.25:1049,75,0	1/1:0,24:24:69.23:965,69,0	1/1:0,27:27:81.27:1133,81,0	1/1:0,16:16:48.16:672,48,0	1/1:0,23:23:66.22:923,66,0	1/1:0,27:27:66.22:923,66,0	1/1:0,35:35:96.32:1343,96,0	1/1:0,27:27:75.22:1024,75,0	1/1:0,16:16:45.06:585,45,0	1/1:0,34:34:87.29:1217,87,0	1/1:0,24:24:66.13:879,66,0	1/1:0,25:25:75.25:1049,75,0	1/1:0,32:32:96.32:1342,96,0	1/1:0,32:32:93.31:1301,93,0	1/1:0,30:30:90.30:1259,90,0	1/1:0,29:29:84.28:1175,84,0	1/1:0,21:21:63.21:880,63,0
chr10	6490654	.	AAAAAAAAAAAAAAG	A	1082.89	PASS	AB=0.985;AC=18;AF=0.321;AN=56;BaseQRankSum=8.340;DP=447;FS=43.464;HRun=0;HaplotypeScore=141.4077;InbreedingCoeff=0.0036;MQ=59.32;MQ0=18;MQRankSum=-2.042;QD=4.59;ReadPosRankSum=2.001;VQSLOD=1.2538;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:21,1:22:60.02:60,0,287	1/1:6,8:14:10.26:195,10,0	0/0:46,0:12:21.54:0,22,717	0/0:32,0:10:6.92:0,7,133	0/0:13,0:13:5.97:0,6,45	0/0:20,0:20:14.88:0,15,121	0/0:10,0:10:17.99:0,18,187	0/0:13,0:12:20.90:0,21,175	0/0:14,0:14:38.97:0,39,419	1/1:16,14:30:27.20:352,27,0	0/1:11,2:12:5.97:124,0,6	0/0:10,0:9:17.96:0,18,185	0/0:10,0:10:18.05:0,18,250	0/0:6,0:6:14.23:0,14,149	0/0:11,0:11:26.02:0,26,261	0/0:13,0:13:29.99:0,30,302	0/1:12,0:12:61.81:62,0,171	0/1:12,0:12:4.88:86,0,5	0/1:11,0:10:32.58:33,0,212	0/1:15,0:14:62.68:63,0,213	1/1:4,12:16:2.72:105,3,0	0/1:17,0:17:32.91:33,0,215	0/1:13,0:13:31.48:31,0,146	0/1:10,0:10:15.68:16,0,131	0/1:14,0:13:2.20:2,0,339	0/1:18,0:18:56.70:57,0,200	0/0:13,0:13:6.42:0,6,175	0/1:19,0:19:31.26:31,0,105
chr10	6490656	.	AAAAAAAAAAAAG	A	1657.07	PASS	AB=0.936;AC=26;AF=0.464;AN=56;BaseQRankSum=6.620;DP=452;FS=11.476;HRun=0;HaplotypeScore=125.8305;InbreedingCoeff=0.0047;MQ=58.84;MQ0=18;MQRankSum=-1.543;QD=5.71;ReadPosRankSum=1.658;VQSLOD=1.6842;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:21,1:22:11.24:120,0,11	1/1:13,0:13:10.97:151,11,0	0/0:49,0:12:21.05:0,21,602	0/0:31,0:9:9.40:0,9,144	0/0:12,0:12:0:0,0,0	1/1:20,0:20:2.02:19,2,0	0/0:9,0:9:5.93:0,6,41	0/1:15,0:14:15.84:16,0,20	0/0:18,0:18:24.73:0,25,167	1/1:29,0:29:31.44:314,31,0	1/1:13,0:12:9.75:124,10,0	0/0:11,0:11:10.19:0,10,78	0/0:8,0:8:16.63:0,17,107	0/1:7,0:7:12.68:13,0,18	0/0:10,0:10:8.63:0,9,50	0/0:13,0:13:9.18:0,9,43	0/1:11,1:12:11.71:142,0,12	1/1:12,0:12:1.08:79,1,0	0/1:10,1:10:72.78:73,0,93	0/1:14,1:14:52.61:136,0,53	1/1:16,0:16:2.90:82,3,0	0/1:15,2:17:38.92:121,0,39	0/1:12,1:13:15.95:85,0,16	0/1:11,0:11:17.32:54,0,17	0/1:14,0:13:41.56:42,0,103	0/1:16,1:17:11.80:144,0,12	1/1:14,0:13:2.97:22,3,0	0/1:12,7:19:1.26:85,0,1
chr10	6490657	.	AAAAAAAAAAAG	A	1858.99	PASS	AB=1.000;AC=40;AF=0.769;AN=52;BaseQRankSum=0.746;DP=456;FS=2.256;HRun=0;HaplotypeScore=119.7916;InbreedingCoeff=0.2052;MQ=58.73;MQ0=18;MQRankSum=0.181;QD=5.57;ReadPosRankSum=1.029;VQSLOD=2.1438;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:22:8.73:114,9,0	1/1:13,0:13:11.46:141,11,0	0/0:48,0:11:24.06:0,24,596	0/0:31,0:9:9.33:0,9,119	./.	1/1:10,10:20:2.97:20,3,0	./.	1/1:15,0:14:5.01:30,5,0	0/1:20,0:20:14.94:43,0,15	1/1:29,0:29:32.79:306,33,0	1/1:12,0:11:7.51:114,8,0	0/1:13,0:12:1.76:2,0,14	0/1:9,0:9:6.60:7,0,10	1/1:10,0:9:9.76:51,10,0	0/0:9,0:9:0:0,0,0	0/0:13,0:13:1.82:0,2,6	1/1:11,1:12:3.82:158,4,0	1/1:12,0:12:2.84:77,3,0	0/1:13,0:12:17.75:79,0,18	1/1:14,1:14:5.63:161,6,0	1/1:16,0:16:3.01:77,3,0	1/1:17,0:17:1.20:103,1,0	1/1:13,0:13:2.90:77,3,0	1/1:10,0:10:2.61:82,3,0	1/1:12,1:12:2.88:85,3,0	1/1:16,1:17:5.77:161,6,0	1/1:14,0:13:4.92:30,5,0	1/1:19,0:19:2.70:77,3,0
chr10	6490667	.	AG	A	5119.23	PASS	AB=1.000;AC=53;AF=0.946;AN=56;BaseQRankSum=-3.524;DP=426;FS=9.497;HRun=1;HaplotypeScore=52.3224;InbreedingCoeff=0.5366;MQ=63.32;MQ0=16;MQRankSum=0.441;QD=13.47;ReadPosRankSum=-2.666;VQSLOD=2.0994;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:22:52.32:368,52,0	1/1:8,0:8:11.46:67,11,0	0/0:46,0:10:16.88:0,17,176	0/1:35,0:13:0.90:1,0,22	1/1:12,0:12:29.66:230,30,0	1/1:10,0:10:2.97:20,3,0	1/1:5,0:5:8.99:75,9,0	1/1:2,12:13:32.88:259,33,0	1/1:23,0:23:44.31:367,44,0	1/1:16,0:16:20.69:232,21,0	1/1:9,0:8:3.47:102,3,0	1/1:16,0:15:35.77:276,36,0	1/1:9,0:9:17.34:132,17,0	1/1:14,0:13:32.87:262,33,0	1/1:12,0:12:26.84:214,27,0	1/1:8,0:8:20.83:154,21,0	1/1:9,0:9:23.13:155,23,0	1/1:13,0:13:31.12:239,31,0	1/1:20,0:19:24.46:298,24,0	1/1:18,0:17:33.98:239,34,0	1/1:12,0:12:2.60:10,3,0	1/1:16,0:16:32.15:254,32,0	1/1:7,0:7:17.59:139,18,0	1/1:13,0:13:9.06:106,9,0	1/1:20,0:19:34.69:275,35,0	1/1:16,0:16:42.14:326,42,0	1/1:16,0:15:41.65:310,42,0	1/1:7,0:7:2.60:10,3,0
chr10	6490986	.	TA	T	15241.45	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=3.805;DP=693;FS=0.776;HRun=9;HaplotypeScore=152.9175;InbreedingCoeff=0.9262;MQ=80.38;MQ0=0;MQRankSum=-6.603;QD=23.20;ReadPosRankSum=5.152;VQSLOD=3.2367;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,26:27:75.04:686,75,0	1/1:0,14:14:39.02:357,39,0	0/0:19,1:21:6.98:0,7,385	0/0:15,0:15:15.78:0,16,188	1/1:1,33:34:93.01:843,93,0	1/1:6,23:29:39.36:525,39,0	1/1:3,27:30:75.04:686,75,0	1/1:2,41:43:99:1086,120,0	1/1:3,22:25:60.03:549,60,0	1/1:6,28:34:83.92:748,84,0	1/1:2,17:19:47.95:428,48,0	1/1:4,23:27:66.03:604,66,0	1/1:1,20:21:51.02:467,51,0	1/1:3,24:27:60.03:549,60,0	1/1:2,26:28:43.42:652,43,0	1/1:0,13:13:30.02:275,30,0	1/1:0,15:15:45.02:412,45,0	1/1:1,19:20:48.03:439,48,0	1/1:2,18:20:54.03:494,54,0	1/1:4,23:27:65.99:596,66,0	1/1:1,5:6:12.01:110,12,0	1/1:1,26:27:74.92:667,75,0	1/1:4,18:22:19.41:432,19,0	1/1:1,9:10:27.01:247,27,0	1/1:0,41:41:99:988,108,0	1/1:5,38:43:79.42:974,79,0	1/1:0,33:33:96.05:878,96,0	1/1:0,22:22:60.03:549,60,0
chr10	6491092	.	A	AC	25771.95	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=2.690;DP=715;FS=0.000;HRun=2;HaplotypeScore=122.9393;InbreedingCoeff=0.9994;MQ=89.42;MQ0=0;MQRankSum=-11.539;QD=38.87;ReadPosRankSum=6.568;VQSLOD=3.6901;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,31:35:93.23:1312,93,0	1/1:0,11:11:30.10:431,30,0	0/0:28,0:28:78.16:0,78,932	0/0:24,0:24:66.18:0,66,789	1/1:2,28:30:81.27:1163,81,0	1/1:1,17:18:51.17:734,51,0	1/1:0,22:22:57.19:821,57,0	1/1:2,36:38:99:1537,108,0	1/1:1,24:25:72.24:1037,72,0	1/1:2,31:33:93.31:1339,93,0	1/1:2,26:28:75.25:1076,75,0	1/1:1,28:29:73.49:1040,73,0	1/1:1,25:26:72.24:1036,72,0	1/1:0,28:28:75.14:1080,75,0	1/1:1,32:33:93.31:1339,93,0	1/1:0,13:13:30.10:432,30,0	1/1:1,26:27:75.25:1080,75,0	1/1:1,21:22:54.18:777,54,0	1/1:1,24:24:72.22:1017,72,0	1/1:4,27:31:75.14:1031,75,0	1/1:0,15:15:39.13:561,39,0	1/1:1,31:32:90.30:1295,90,0	1/1:1,27:28:81.27:1163,81,0	1/1:0,19:19:57.19:820,57,0	1/1:2,26:28:69.23:990,69,0	1/1:1,26:27:78.25:1105,78,0	1/1:1,26:27:72.24:1036,72,0	1/1:0,13:13:36.12:518,36,0
chr10	6491545	.	C	CT	30529.63	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-2.922;DP=776;FS=8.030;HRun=1;HaplotypeScore=122.1464;InbreedingCoeff=0.9685;MQ=78.04;MQ0=0;MQRankSum=-9.417;QD=41.20;ReadPosRankSum=5.448;VQSLOD=3.5914;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,38:38:99:1484,99,0	1/1:0,14:14:42.14:630,42,0	0/0:18,0:18:51.17:0,51,662	0/0:17,0:17:48.60:0,49,599	1/1:0,31:31:90.30:1349,90,0	1/1:3,28:31:78.26:1169,78,0	1/1:0,22:22:60.19:899,60,0	1/1:4,30:34:96.32:1434,96,0	1/1:2,34:36:99:1484,99,0	1/1:3,22:25:66.17:944,66,0	1/1:2,14:17:20.47:605,20,0	1/1:0,31:31:90.30:1349,90,0	1/1:0,26:26:72.24:1079,72,0	1/1:2,28:30:84.28:1258,84,0	1/1:0,41:40:99:1709,114,0	1/1:1,30:31:87.29:1304,87,0	1/1:2,47:49:99:2113,141,0	1/1:0,35:35:96.33:1439,96,0	1/1:4,12:16:42.10:598,42,0	1/1:1,24:25:69.23:1034,69,0	1/1:1,37:38:99:1619,108,0	1/1:0,26:26:75.25:1124,75,0	1/1:0,28:28:72.24:1078,72,0	1/1:2,42:44:99:1843,123,0	1/1:0,22:22:60.20:900,60,0	1/1:3,23:27:72.21:1049,72,0	1/1:0,21:21:60.20:899,60,0	1/1:0,3:3:9.03:135,9,0
chr10	6493019	.	C	CAGAGAG	1389.51	PASS	AB=0.986;AC=27;AF=0.482;AN=56;BaseQRankSum=7.597;DP=658;FS=29.604;HRun=0;HaplotypeScore=181.9363;InbreedingCoeff=-0.4061;MQ=52.90;MQ0=20;MQRankSum=-1.449;QD=2.45;ReadPosRankSum=1.712;VQSLOD=1.3596;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:19,0:19:13.19:13,0,16	0/1:4,0:4:17.95:18,0,32	0/0:40,0:17:26.24:0,26,488	0/1:51,0:13:0.11:0,0,44	0/1:20,0:19:4.49:41,0,4	0/1:22,0:22:18.01:18,0,59	0/1:20,0:18:2.49:2,0,19	0/1:47,0:46:23.53:24,0,120	0/1:22,0:21:8.63:9,0,27	1/1:15,0:15:22.40:147,22,0	1/1:17,0:17:5.94:42,6,0	0/1:19,0:18:41.81:291,0,42	0/1:23,5:34:37.89:131,0,38	0/1:22,0:22:0.96:1,0,42	0/1:23,0:22:16.52:22,0,17	0/1:29,0:29:36.20:50,0,36	0/0:17,0:16:8.27:0,8,84	0/1:11,0:11:20.35:20,0,31	0/1:23,0:23:24.30:24,0,43	0/0:29,0:28:11.10:0,11,81	1/1:24,0:24:7.58:36,8,0	0/1:22,0:19:20.77:21,0,39	0/1:27,0:26:16.55:17,0,42	0/1:19,0:19:44.88:152,0,45	0/1:21,0:20:1.10:1,0,20	0/1:33,1:34:38.67:194,0,39	0/1:19,0:19:43.99:271,0,44	0/0:6,0:6:3.63:0,4,10
chr10	6493021	.	GAGAC	G	1181.48	PASS	AB=1.000;AC=16;AF=0.286;AN=56;BaseQRankSum=-1.710;DP=651;FS=0.476;HRun=0;HaplotypeScore=158.9852;InbreedingCoeff=0.4438;MQ=52.33;MQ0=21;MQRankSum=0.823;QD=5.55;ReadPosRankSum=0.563;VQSLOD=2.7578;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:25.08:0,25,216	1/1:4,0:4:12:131,12,0	0/0:39,0:16:25.30:0,25,231	0/1:51,0:13:10.60:15,0,11	1/1:19,0:18:39.55:309,40,0	0/1:23,0:23:22.49:22,0,115	0/0:19,0:17:33.16:0,33,277	0/0:46,0:45:99:0,121,850	0/0:23,0:22:26.32:0,26,267	1/1:4,12:16:35.69:360,36,0	1/1:14,1:15:6:56,6,0	0/0:19,0:18:7.54:0,8,294	0/0:32,0:31:47.59:0,48,550	0/0:22,0:22:48.40:0,48,506	0/0:22,0:21:5.86:0,6,81	0/0:27,0:27:34.80:0,35,458	0/0:18,0:17:25.81:0,26,228	1/1:12,0:12:23.43:191,23,0	0/0:23,0:23:11.57:0,12,391	0/0:27,0:26:35.64:0,36,373	0/1:25,0:24:4.93:171,0,5	0/1:23,0:20:34.97:35,0,101	0/0:27,0:26:10.31:0,10,339	0/1:18,0:18:35.79:36,0,269	0/0:20,0:19:11.08:0,11,150	0/0:34,0:34:88.37:0,88,910	0/0:21,0:21:29.71:0,30,389	0/1:6,0:6:36.21:36,0,91
chr10	6493023	.	GAC	G	1083.18	PASS	AB=1.000;AC=18;AF=0.321;AN=56;BaseQRankSum=-3.944;DP=647;FS=0.000;HRun=0;HaplotypeScore=143.1797;InbreedingCoeff=0.2876;MQ=52.17;MQ0=21;MQRankSum=2.511;QD=4.07;ReadPosRankSum=0.600;VQSLOD=2.5441;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:33.77:0,34,247	1/1:3,1:4:11.98:99,12,0	0/0:37,0:14:25.22:0,25,231	0/1:46,0:9:10.97:15,0,11	1/1:19,0:18:41.27:349,41,0	0/0:24,0:24:7.98:0,8,111	0/0:19,0:17:37.09:0,37,282	0/0:45,0:44:99:0,121,854	0/0:23,0:22:31.81:0,32,232	1/1:16,0:16:28.02:258,28,0	1/1:4,9:13:4.98:24,5,0	0/0:20,0:19:6.90:0,7,257	0/0:32,0:31:25.50:0,26,422	0/0:23,0:23:47.84:0,48,445	0/1:24,0:23:13.94:14,0,60	0/1:28,0:28:32.50:33,0,403	0/1:18,0:17:30.74:31,0,183	1/1:12,0:12:23.40:192,23,0	0/0:23,0:23:3.23:0,3,356	0/0:26,0:25:35.63:0,36,327	0/1:23,0:22:19.13:171,0,19	0/1:24,0:21:59.04:59,0,98	0/0:27,0:27:42.19:0,42,354	0/1:18,0:18:8.60:9,0,208	0/1:20,0:19:11.98:12,0,111	0/0:35,0:35:99:0,101,777	0/0:22,0:22:29.98:0,30,345	0/0:6,0:6:6.66:0,7,84
chr10	6493029	.	G	GACAGAGAC	7153.23	PASS	AB=0.951;AC=30;AF=0.536;AN=56;BaseQRankSum=-3.406;DP=657;FS=11.549;HRun=0;HaplotypeScore=183.8982;InbreedingCoeff=-0.0536;MQ=49.67;MQ0=21;MQRankSum=-2.593;QD=13.27;ReadPosRankSum=2.294;VQSLOD=3.2243;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:19,0:19:11.55:12,0,43	0/0:4,0:4:12.01:0,12,173	0/0:34,0:13:27.06:0,27,366	0/1:41,0:6:18.86:19,0,38	0/0:22,0:21:42.02:0,42,631	0/1:13,0:24:15.06:125,0,15	1/1:19,0:17:7.55:365,8,0	1/1:44,0:43:90.44:1223,90,0	0/1:23,0:22:75.64:266,0,76	0/0:20,0:20:28.89:0,29,382	0/1:11,0:11:11.46:11,0,40	0/1:19,0:18:45.01:202,0,45	0/1:32,0:31:99:102,0,135	0/1:21,0:21:49.58:50,0,70	0/1:14,0:27:19.72:70,0,20	0/1:29,0:30:43.22:566,0,43	0/1:19,0:18:99:290,0,208	0/0:15,0:15:28.92:0,29,368	1/1:23,0:22:16.60:582,17,0	1/1:29,0:28:2.25:317,2,0	0/0:23,0:22:32.97:0,33,470	1/1:24,0:21:12.04:85,12,0	0/1:28,0:27:73.31:73,0,90	0/1:18,0:18:24.59:178,0,25	0/1:24,0:23:42.49:217,0,42	1/1:3,26:37:53.94:1495,54,0	1/1:3,16:20:5.16:638,5,0	1/1:6,0:6:18.06:268,18,0
chr10	6493979	.	ATT	A	6800.68	PASS	AB=0.536;AC=29;AF=0.518;AN=56;BaseQRankSum=2.754;DP=570;FS=10.877;HRun=10;HaplotypeScore=112.0661;InbreedingCoeff=0.8932;MQ=73.18;MQ0=1;MQRankSum=-1.901;QD=23.21;ReadPosRankSum=0.315;VQSLOD=3.1213;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:34:72.60:0,73,286	0/0:1,0:7:14.97:0,15,51	0/0:23,0:21:46.49:0,46,620	0/0:13,0:12:26.76:0,27,360	0/0:5,0:17:36:0,36,166	1/1:0,13:13:39.11:435,39,0	1/1:2,11:13:18.55:350,19,0	1/1:7,20:27:60.04:635,60,0	1/1:2,10:11:21.05:233,21,0	0/0:3,0:22:44.89:0,45,156	0/0:2,0:18:4.04:0,4,84	0/0:5,0:21:41.15:0,41,185	0/0:2,0:23:47.41:0,47,163	0/0:3,0:18:27.96:0,28,134	1/1:1,26:27:66.04:734,66,0	1/1:2,16:18:45.12:499,45,0	1/1:3,21:24:41.86:468,42,0	0/0:4,0:26:7.78:0,8,96	1/1:2,10:12:27.07:301,27,0	1/1:0,18:18:48.11:534,48,0	0/1:2,1:15:12.97:13,0,40	1/1:4,15:19:12.37:305,12,0	0/0:3,0:22:38.14:0,38,131	0/0:6,0:32:65.38:0,65,238	1/1:5,19:24:42.10:468,42,0	1/1:5,21:27:57.07:694,57,0	1/1:3,25:28:66.16:733,66,0	1/1:3,13:16:36.09:399,36,0
chr10	6494117	.	T	TA	23408.38	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-8.896;DP=619;FS=0.687;HRun=1;HaplotypeScore=59.5946;InbreedingCoeff=0.9683;MQ=79.76;MQ0=0;MQRankSum=-8.759;QD=40.01;ReadPosRankSum=4.631;VQSLOD=5.2656;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,25:25:72.24:1078,72,0	1/1:0,4:4:9.03:135,9,0	0/0:17,0:17:45.14:0,45,554	0/0:17,0:17:47.73:0,48,556	1/1:1,21:22:54.18:808,54,0	1/1:0,27:27:66.22:988,66,0	1/1:1,21:22:63.21:944,63,0	1/1:1,35:36:99:1499,102,0	1/1:0,12:12:27.09:405,27,0	1/1:1,25:26:75.24:1095,75,0	1/1:1,20:21:57.19:854,57,0	1/1:1,18:19:45.15:674,45,0	1/1:1,21:22:54.18:808,54,0	1/1:0,24:24:66.22:988,66,0	1/1:0,22:22:66.22:989,66,0	1/1:1,23:24:69.23:1034,69,0	1/1:0,24:24:63.21:939,63,0	1/1:0,22:22:57.19:853,57,0	1/1:3,23:26:72.17:988,72,0	1/1:1,21:22:60.20:899,60,0	1/1:1,25:26:72.24:1079,72,0	1/1:1,31:32:84.20:1229,84,0	1/1:2,25:27:66.22:988,66,0	1/1:2,16:18:45.15:674,45,0	1/1:0,32:32:90.30:1348,90,0	1/1:0,15:15:45.15:673,45,0	1/1:0,28:27:75.25:1123,75,0	1/1:0,7:7:21.07:315,21,0
chr10	6495786	.	A	AAG	3002.12	PASS	AB=0.619;AC=19;AF=0.339;AN=56;BaseQRankSum=-2.546;DP=575;FS=1.897;HRun=0;HaplotypeScore=78.9979;InbreedingCoeff=0.8766;MQ=53.36;MQ0=8;MQRankSum=1.064;QD=14.79;ReadPosRankSum=4.569;VQSLOD=3.3721;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:94.59:0,95,754	0/0:11,0:11:13.78:0,14,145	0/0:18,0:4:11.87:0,12,93	0/0:16,0:5:11.91:0,12,90	0/0:30,0:29:61.23:0,61,397	1/1:2,15:20:45:591,45,0	1/1:13,3:18:25.75:340,26,0	0/0:18,0:18:41.66:0,42,333	0/1:5,6:13:7.33:71,0,7	0/0:19,0:19:45.13:0,45,327	0/0:20,0:20:31.27:0,31,237	0/0:18,0:17:37.88:0,38,312	0/0:20,0:20:49.36:0,49,393	0/0:20,0:20:51.31:0,51,382	1/1:5,9:14:11.85:147,12,0	1/1:7,17:26:22.09:271,22,0	1/1:6,26:34:44.33:555,44,0	0/0:28,0:25:60.31:0,60,450	1/1:4,8:13:2.83:221,3,0	1/1:7,24:32:19.32:571,19,0	0/0:10,0:9:11.56:0,12,70	1/1:6,10:18:18.56:270,19,0	0/0:21,0:21:54.70:0,55,449	0/0:23,0:23:38.09:0,38,368	1/1:5,7:13:15.47:173,15,0	0/0:24,0:20:42.82:0,43,358	0/0:25,0:25:32.30:0,32,383	0/0:9,0:9:21.41:0,21,169
chr10	6495889	.	GAGGT	G	11469.03	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=17.841;DP=630;FS=4.275;HRun=0;HaplotypeScore=132.6604;InbreedingCoeff=0.9982;MQ=86.25;MQ0=0;MQRankSum=-10.708;QD=41.11;ReadPosRankSum=1.584;VQSLOD=5.2620;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,138,3603	0/0:7,0:7:21.07:0,21,494	0/0:26,0:26:74.18:0,74,1734	0/0:24,0:24:66.20:0,66,1583	0/0:28,0:28:78.27:0,78,2079	1/1:2,19:21:48.16:877,48,0	1/1:2,15:17:33.11:598,33,0	1/1:4,19:23:57.18:1010,57,0	1/1:3,16:19:39.13:728,39,0	0/0:20,0:20:57.20:0,57,1493	0/0:21,0:21:63.20:0,63,1533	0/0:20,0:20:57.17:0,57,1426	0/0:24,0:24:69.24:0,69,1756	0/0:20,0:20:57.20:0,57,1485	1/1:2,17:19:42.14:783,42,0	1/1:2,18:20:39.13:728,39,0	1/1:3,34:37:96.33:1775,96,0	0/0:31,0:31:90.31:0,90,2358	1/1:2,11:13:33.11:606,33,0	1/1:0,23:23:51.13:915,51,0	0/0:30,0:30:81.28:0,81,2159	1/1:2,14:16:21.07:392,21,0	0/0:22,0:22:57.20:0,57,1480	0/0:27,0:27:78.24:0,78,2013	1/1:1,14:15:39.13:727,39,0	1/1:1,17:18:48.16:894,48,0	1/1:3,26:29:57.19:1045,57,0	1/1:1,8:9:21.07:392,21,0
chr10	6496600	.	C	CAA	13678.59	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=0.597;DP=607;FS=0.000;HRun=9;HaplotypeScore=106.7687;InbreedingCoeff=0.9548;MQ=67.94;MQ0=0;MQRankSum=-3.409;QD=29.61;ReadPosRankSum=-2.926;VQSLOD=4.1483;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,0:22:25.87:253,26,0	0/0:11,0:11:33.08:0,33,351	0/0:14,0:12:4.14:0,4,163	0/0:10,0:8:15.02:0,15,160	0/0:19,0:20:45.01:0,45,514	1/1:3,32:35:87.30:1339,87,0	1/1:3,12:16:38.62:563,39,0	1/1:5,15:22:51.14:727,51,0	1/1:2,17:19:36.12:554,36,0	0/0:28,0:28:72.14:0,72,761	0/0:27,0:27:81.11:0,81,831	1/1:17,0:25:45.11:485,45,0	1/1:9,0:15:30.06:308,30,0	1/1:13,1:21:29.87:296,30,0	1/1:6,18:25:48.12:702,48,0	1/1:2,25:28:63.21:970,63,0	1/1:1,27:29:72.20:1065,72,0	0/0:14,0:14:42.11:0,42,447	1/1:6,10:18:40.90:545,41,0	1/1:2,21:25:69.15:973,69,0	0/0:21,0:21:57.14:0,57,607	1/1:4,22:27:78.21:1128,78,0	1/1:10,1:26:37.17:381,37,0	1/1:4,0:4:6.01:67,6,0	1/1:2,23:26:60.16:880,60,0	1/1:6,21:30:73.95:957,74,0	1/1:9,19:31:56.66:794,57,0	1/1:2,16:18:45.15:693,45,0
chr10	6499734	.	T	TGA	1007.13	PASS	AB=0.967;AC=35;AF=0.700;AN=50;BaseQRankSum=1.395;DP=470;FS=1.207;HRun=0;HaplotypeScore=85.5981;InbreedingCoeff=0.2842;MQ=67.63;MQ0=6;MQRankSum=0.719;QD=3.22;ReadPosRankSum=-2.219;VQSLOD=1.8685;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:22:36.88:37,0,47	0/1:8,2:10:26.22:38,0,26	./.	./.	1/1:11,3:15:3.01:44,3,0	1/1:12,0:11:2.96:19,3,0	0/1:10,0:10:23.19:47,0,23	0/1:24,0:24:0:1,0,0	1/1:15,0:15:12:105,12,0	1/1:15,0:15:12.97:154,13,0	1/1:13,0:13:1.55:4,2,0	./.	1/1:10,0:10:2.99:24,3,0	1/1:19,0:19:9.01:93,9,0	1/1:8,3:11:3.01:44,3,0	1/1:16,0:16:5.62:62,6,0	1/1:13,0:13:5.68:39,6,0	1/1:12,7:21:9.03:133,9,0	1/1:12,0:12:8.46:63,8,0	1/1:16,0:16:5.99:49,6,0	0/0:15,0:15:2.91:0,3,20	1/1:20,0:20:12.01:137,12,0	0/1:16,0:16:0:0,0,0	1/1:21,0:20:5.51:51,6,0	0/0:13,0:13:2.03:0,2,6	0/0:30,0:30:3:0,3,32	0/0:10,0:10:6.02:0,6,64	0/0:26,0:26:11.74:0,12,128
chr10	6499778	.	A	ATT	1494.33	PASS	AB=0.550;AC=14;AF=0.250;AN=56;BaseQRankSum=2.876;DP=514;FS=14.964;HRun=0;HaplotypeScore=88.3105;InbreedingCoeff=0.5907;MQ=61.24;MQ0=13;MQRankSum=0.809;QD=10.24;ReadPosRankSum=-2.603;VQSLOD=1.7244;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:26:57.17:0,57,818	0/0:6,0:6:11.24:0,11,127	0/0:30,0:12:36.04:0,36,509	0/0:44,0:16:32.66:0,33,462	0/0:20,0:20:37.90:0,38,541	1/1:5,0:19:3:36,3,0	1/1:2,1:17:8.99:95,9,0	0/0:29,0:29:81.24:0,81,1235	0/1:1,0:15:8.90:143,0,9	0/0:17,0:17:48.38:0,48,560	0/0:15,0:15:29.83:0,30,408	0/0:14,0:13:29.79:0,30,380	0/0:14,0:14:24.87:0,25,312	0/0:22,0:22:43.92:0,44,517	1/1:7,0:7:7.59:177,8,0	1/1:5,11:17:2.32:72,2,0	0/1:2,1:18:32.75:89,0,33	0/0:24,0:24:45.91:0,46,598	1/1:4,12:16:39.13:653,39,0	0/1:4,12:16:1.20:391,0,1	0/0:20,0:20:51.16:0,51,753	0/0:10,2:13:15.39:0,15,125	0/0:15,0:15:24.08:0,24,358	0/0:17,0:17:16.87:0,17,230	0/1:6,0:21:1.86:2,0,58	0/0:14,0:13:33.56:0,34,462	0/0:10,0:10:26.46:0,26,369	0/0:17,0:17:51.15:0,51,754
chr10	6499944	.	CG	C	2796.54	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=7.375;DP=504;FS=2.582;HRun=1;HaplotypeScore=73.1164;InbreedingCoeff=0.5802;MQ=76.92;MQ0=0;MQRankSum=0.276;QD=18.04;ReadPosRankSum=-0.195;VQSLOD=3.8066;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:96.13:0,96,1341	0/0:5,0:5:10.30:0,10,60	0/0:10,0:11:6.22:0,6,344	0/0:12,0:12:33.90:0,34,410	0/1:10,0:10:6.92:7,0,58	0/0:16,0:16:45.14:0,45,664	0/0:24,0:24:66.19:0,66,979	0/1:19,0:19:59.93:60,0,120	0/0:20,0:20:60.16:0,60,882	0/0:15,0:15:38.68:0,39,153	0/1:7,0:7:5.38:5,0,53	1/1:0,15:15:36.03:459,36,0	1/1:2,12:14:33.91:454,34,0	1/1:1,21:22:48.01:647,48,0	0/0:19,0:19:57.09:0,57,817	0/0:18,0:18:54.18:0,54,817	0/0:43,0:43:99:0,126,1836	0/0:23,0:23:31.60:0,32,234	0/0:25,0:25:69.21:0,69,1031	0/0:10,0:10:23.94:0,24,288	0/0:32,0:32:11.80:0,12,259	0/0:12,0:12:30.10:0,30,447	1/1:0,9:9:21.07:293,21,0	1/1:1,26:27:72.07:978,72,0	0/0:18,0:18:54.11:0,54,743	0/1:21,0:21:0.83:1,0,165	0/0:11,0:11:30.51:0,31,139	0/1:11,0:11:38.77:74,0,39
chr10	6500120	.	C	CT	3220.76	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=10.833;DP=627;FS=0.408;HRun=7;HaplotypeScore=99.9319;InbreedingCoeff=0.9983;MQ=78.29;MQ0=0;MQRankSum=-1.670;QD=27.07;ReadPosRankSum=1.335;VQSLOD=3.6876;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,119,1167	0/0:10,0:10:21.02:0,21,203	0/0:17,0:17:39.05:0,39,374	0/0:16,0:16:32.58:0,33,286	0/0:23,0:23:57.05:0,57,541	0/0:24,0:24:54.08:0,54,522	0/0:27,0:27:75.12:0,75,724	0/0:27,0:27:75.12:0,75,724	0/0:23,0:23:57.05:0,57,538	0/0:29,0:29:78.12:0,78,753	0/0:10,0:10:30.05:0,30,289	1/1:2,19:21:39.12:468,39,0	1/1:1,15:16:42.13:504,42,0	1/1:4,17:21:48.15:576,48,0	0/0:35,0:35:81.11:0,81,776	0/0:13,0:12:36.04:0,36,341	0/0:29,0:29:72.08:0,72,687	0/0:20,0:20:54.08:0,54,521	0/0:29,0:29:72.11:0,72,695	0/0:19,0:19:57.09:0,57,550	0/0:17,0:17:48.05:0,48,457	0/0:20,0:20:57.09:0,57,550	1/1:3,22:25:52.40:767,52,0	1/1:4,32:36:90.28:1081,90,0	0/0:21,0:21:45.06:0,45,434	0/0:27,0:27:72.10:0,72,690	0/0:9,0:9:24.03:0,24,226	0/0:18,0:18:48.08:0,48,464
chr10	6500135	.	C	CA	8101.28	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-16.345;DP=638;FS=3.136;HRun=5;HaplotypeScore=85.3323;InbreedingCoeff=0.9986;MQ=80.59;MQ0=0;MQRankSum=0.855;QD=34.62;ReadPosRankSum=2.784;VQSLOD=4.9097;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,117,1257	0/0:8,0:8:21.05:0,21,226	0/0:21,0:22:36.25:0,36,496	0/0:17,0:17:38.70:0,39,379	0/0:23,0:23:60.13:0,60,636	1/1:0,22:22:66.08:844,66,0	1/1:0,29:29:81.26:1065,81,0	0/0:33,0:33:96.23:0,96,1025	1/1:2,20:22:54.18:711,54,0	0/0:28,0:28:69.17:0,69,735	0/0:14,0:14:42.09:0,42,441	0/0:19,0:19:48.12:0,48,516	0/0:17,0:17:48.12:0,48,515	0/0:21,0:21:60.15:0,60,644	1/1:3,29:32:75.24:987,75,0	1/1:1,12:12:36.12:474,36,0	1/1:2,22:24:57.19:750,57,0	0/0:19,1:20:20.68:0,21,572	1/1:6,21:27:66.21:865,66,0	1/1:1,21:22:63.20:829,63,0	0/0:19,0:19:48.10:0,48,508	1/1:2,19:21:57.18:748,57,0	0/0:28,0:28:72.18:0,72,773	0/0:37,0:37:99:0,99,1054	1/1:0,22:22:63.20:829,63,0	0/0:26,0:26:72.18:0,72,774	0/0:10,0:10:30.08:0,30,322	0/0:17,0:17:48.12:0,48,516
chr10	6500952	.	AACGAG	A	6621.12	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=12.691;DP=746;FS=2.243;HRun=0;HaplotypeScore=164.6816;InbreedingCoeff=0.9999;MQ=81.02;MQ0=0;MQRankSum=-13.661;QD=44.74;ReadPosRankSum=3.141;VQSLOD=4.6906;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:39:99:0,114,3432	0/0:12,0:12:36.09:0,36,850	0/0:26,0:26:65.89:0,66,1700	0/0:18,0:18:44.90:0,45,1234	0/0:23,0:23:63.20:0,63,1755	0/0:21,0:21:63.20:0,63,1819	0/0:34,0:34:99:0,102,2962	0/0:17,0:17:45.15:0,45,1229	0/0:32,0:32:78.25:0,78,2238	0/0:27,0:27:78.26:0,78,2230	0/0:20,0:20:54.19:0,54,1619	1/1:3,26:29:78.27:1616,78,0	1/1:3,30:33:75.26:1546,75,0	1/1:1,33:34:81.28:1677,81,0	0/0:31,0:31:87.30:0,87,2665	0/0:21,0:21:60.21:0,60,1809	0/0:26,0:26:72.25:0,72,2200	0/0:27,0:27:78.25:0,78,2290	0/0:21,0:21:48.16:0,48,1357	0/0:25,0:25:72.25:0,72,2164	0/0:38,0:38:99:0,108,3207	0/0:24,0:24:69.24:0,69,2045	1/1:0,21:21:38.97:791,39,0	1/1:2,29:31:46.70:991,47,0	0/0:27,0:27:78.25:0,78,2280	0/0:16,0:16:45.15:0,45,1378	0/0:42,0:40:99:0,126,3424	0/0:30,0:30:90.31:0,90,2755
chr10	6507070	.	GCA	G	657.13	PASS	AB=0.938;AC=29;AF=0.580;AN=50;BaseQRankSum=0.174;DP=463;FS=9.815;HRun=0;HaplotypeScore=99.9317;InbreedingCoeff=0.1595;MQ=56.50;MQ0=18;MQRankSum=1.098;QD=2.03;ReadPosRankSum=2.182;VQSLOD=1.3417;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:24:0.94:2,1,0	./.	./.	./.	0/1:27,0:26:1.06:1,0,48	1/1:26,0:26:2.97:9,3,0	0/1:17,0:16:0.05:0,0,0	0/0:16,0:12:6.02:0,6,84	1/1:14,0:15:3.59:14,4,0	0/0:21,0:21:18.31:0,18,154	0/0:15,0:15:3.83:0,4,24	1/1:13,3:16:15.04:163,15,0	1/1:11,1:11:8.70:89,9,0	1/1:12,4:16:5.58:45,6,0	0/1:8,2:10:19.75:20,0,122	1/1:13,0:14:2.45:11,2,0	0/1:19,0:19:18.04:18,0,110	0/0:16,0:16:25.95:0,26,204	0/0:9,0:9:3.01:0,3,45	0/0:11,0:11:0:0,0,0	1/1:26,0:25:0.94:1,1,0	1/1:18,0:18:3.18:13,3,0	0/1:5,1:6:6.71:27,0,7	1/1:23,4:28:29.85:284,30,0	0/1:11,2:13:0:0,0,0	0/1:14,1:15:35.18:35,0,173	0/1:16,1:17:47.88:48,0,100	0/1:5,0:5:15.74:16,0,61
chr10	6507113	.	TACACAC	T	2464.25	PASS	AB=0.953;AC=34;AF=0.630;AN=54;BaseQRankSum=-2.907;DP=469;FS=5.484;HRun=0;HaplotypeScore=123.9635;InbreedingCoeff=0.3958;MQ=48.57;MQ0=23;MQRankSum=0.240;QD=7.47;ReadPosRankSum=-1.088;VQSLOD=2.1746;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:24:3.88:13,4,0	./.	0/0:14,0:1:3.01:0,3,64	0/0:11,0:2:2.22:0,2,7	1/1:27,1:27:16.20:272,16,0	1/1:25,0:24:3.48:32,3,0	0/1:15,0:14:0.14:0,0,0	1/1:18,13:26:35.94:547,36,0	0/1:20,0:19:19.81:41,0,20	1/1:11,8:18:26.39:447,26,0	1/1:6,8:14:4.12:100,4,0	0/0:8,0:20:15.50:0,16,187	0/1:10,0:12:6.61:7,0,77	0/0:6,0:17:11.82:0,12,121	1/1:14,0:13:0.78:3,1,0	1/1:14,0:14:2.92:37,3,0	0/1:13,0:13:11.46:18,0,11	1/1:10,5:15:5.23:128,5,0	1/1:7,0:7:4.54:26,5,0	0/0:17,0:16:0.98:0,1,24	0/0:22,0:19:1.62:0,2,19	1/1:14,0:14:7.10:40,7,0	0/0:1,0:9:9.50:0,10,124	0/0:16,0:25:19.69:0,20,237	1/1:2,0:14:0.47:1,0,0	1/1:8,13:21:38.36:787,38,0	1/1:7,9:16:5.42:83,5,0	1/1:5,4:8:3.01:41,3,0
chr10	6507123	.	C	CTT	863.31	PASS	AB=0.957;AC=17;AF=0.304;AN=56;BaseQRankSum=2.694;DP=477;FS=7.810;HRun=0;HaplotypeScore=114.6136;InbreedingCoeff=0.4226;MQ=50.68;MQ0=19;MQRankSum=-1.416;QD=5.14;ReadPosRankSum=-4.379;VQSLOD=0.9462;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:21:6.61:82,7,0	0/0:5,0:5:6.02:0,6,90	0/0:25,0:8:18.95:0,19,266	0/0:16,0:5:14.84:0,15,190	0/0:29,0:28:26.53:0,27,292	1/1:23,0:22:3.48:33,3,0	1/1:12,1:13:3.04:38,3,0	0/0:32,0:29:76.80:0,77,832	0/1:18,0:17:25.34:80,0,25	0/0:20,0:19:53.35:0,53,580	0/0:13,0:13:21.06:0,21,256	0/0:21,0:20:23.60:0,24,298	0/0:19,0:18:21.48:0,21,242	0/0:19,0:19:20.98:0,21,223	0/1:12,1:12:59.31:59,0,76	1/1:12,1:13:9.75:85,10,0	0/1:15,1:16:77.01:197,0,77	0/0:14,0:14:26.54:0,27,298	0/1:7,0:6:86.86:87,0,135	1/1:17,0:16:23.31:273,23,0	0/0:20,0:18:5.95:0,6,85	0/1:10,1:11:18.46:28,0,18	0/0:10,0:10:11.98:0,12,106	0/0:22,0:22:25.99:0,26,295	1/1:14,0:14:6.02:75,6,0	0/0:19,0:19:50.98:0,51,425	0/0:16,0:16:16.57:0,17,187	0/0:9,0:8:12.02:0,12,146
chr10	6513091	.	C	CGT	669.20	PASS	AB=0.991;AC=34;AF=0.607;AN=56;BaseQRankSum=-2.302;DP=738;FS=19.779;HRun=0;HaplotypeScore=317.4985;InbreedingCoeff=-0.1418;MQ=41.89;MQ0=16;MQRankSum=-0.942;QD=1.04;ReadPosRankSum=0.135;VQSLOD=0.4652;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:27:15.33:35,0,15	0/0:18,0:16:6.87:0,7,31	1/1:29,0:14:1.55:4,2,0	0/1:32,0:17:9.61:10,0,59	1/1:30,0:29:0.51:2,1,0	0/1:21,0:21:0.86:1,0,9	1/1:8,0:7:1.69:7,2,0	0/0:30,0:23:6.53:0,7,29	0/1:34,0:32:5.24:5,0,12	0/1:48,0:45:59.19:113,0,59	1/1:18,0:18:0.81:2,1,0	0/1:25,1:24:18.89:19,0,66	0/1:22,0:20:24.37:77,0,24	0/1:32,2:30:34.15:97,0,34	0/0:20,0:18:4.81:0,5,21	1/1:23,0:19:0.30:14,0,0	0/1:20,0:19:12.20:12,0,22	0/1:14,0:13:21.32:21,0,28	1/1:25,0:19:17.45:85,17,0	0/1:40,0:38:0.01:3,0,0	1/1:36,0:32:1.40:9,1,0	1/1:38,0:37:0.19:1,0,0	0/1:29,1:29:13.09:37,0,13	1/1:29,1:28:15.85:165,16,0	0/0:28,0:28:1.19:0,1,4	0/1:32,0:28:15.51:57,0,16	1/1:15,0:14:1.79:5,2,0	0/1:10,0:9:2.82:22,0,3
chr10	6513156	.	TG	T	1924.01	PASS	AB=0.857;AC=19;AF=0.339;AN=56;BaseQRankSum=14.303;DP=1494;FS=105.591;HRun=2;HaplotypeScore=671.1921;InbreedingCoeff=-0.5019;MQ=30.51;MQ0=126;MQRankSum=-6.529;QD=1.92;ReadPosRankSum=3.853;VQSLOD=-0.0271;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:39,5:33:19.03:19,0,524	0/1:29,8:34:86.29:86,0,205	0/0:32,0:2:3:0,3,40	0/0:40,0:1:3.01:0,3,40	0/1:55,17:69:18.40:18,0,196	0/0:30,3:33:38.18:0,38,577	0/0:59,3:53:75.86:0,76,901	0/0:81,3:48:80.29:0,80,1171	0/0:59,4:56:17.38:0,17,763	0/1:89,15:84:99:752,0,927	0/0:40,13:49:26.92:0,27,303	0/1:48,6:43:0.86:1,0,366	0/1:22,5:21:36.11:36,0,251	0/1:42,7:39:34.82:35,0,357	0/1:40,1:32:3.82:4,0,224	0/1:37,3:32:78.49:78,0,548	0/1:16,5:20:85.87:86,0,297	0/1:13,2:15:40.19:40,0,346	0/1:40,3:24:6.58:7,0,613	0/1:64,20:79:99:121,0,165	0/0:76,9:57:48.19:0,48,586	0/1:83,17:99:15.92:16,0,452	0/1:55,20:71:36.90:37,0,288	0/0:34,7:32:23.21:0,23,224	0/1:47,21:64:48.44:48,0,267	0/1:63,12:59:99:394,0,671	0/1:20,6:21:99:188,0,176	0/1:13,4:13:83.99:110,0,84
chr10	6513178	.	G	GT	2706.61	PASS	AB=0.868;AC=17;AF=0.304;AN=56;BaseQRankSum=14.776;DP=1228;FS=88.123;HRun=1;HaplotypeScore=548.5907;InbreedingCoeff=-0.4221;MQ=37.08;MQ0=59;MQRankSum=-12.355;QD=3.72;ReadPosRankSum=2.244;VQSLOD=0.5593;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,1:33:7.36:0,7,790	0/1:23,7:29:78.46:78,0,260	0/0:72,0:12:11.32:0,11,304	0/0:66,0:3:1.82:0,2,5	0/1:45,18:64:57.87:58,0,409	0/0:23,1:25:24:0,24,606	0/0:37,1:35:56.23:0,56,712	0/1:35,2:29:13.52:14,0,618	0/0:43,2:42:23.93:0,24,744	0/1:56,17:64:99:1172,0,629	0/1:34,11:45:28.56:29,0,306	0/1:41,3:41:5.13:5,0,536	0/1:25,1:23:38.09:38,0,361	0/0:32,2:32:37.19:0,37,443	0/1:21,1:18:28.27:28,0,257	0/1:26,1:24:74.46:74,0,461	0/1:15,1:14:4.56:5,0,302	0/0:16,0:16:45.15:0,45,625	0/1:36,1:24:26.21:26,0,582	0/1:40,18:58:98.92:99,0,293	0/0:69,5:65:99:0,106,1457	0/1:57,29:87:99:122,0,432	0/0:43,8:50:27.09:0,27,419	0/0:33,7:36:53.04:0,53,678	0/1:45,16:59:99:322,0,435	0/1:42,9:46:99:479,0,629	0/1:15,5:20:99:172,0,280	0/1:11,2:12:99:140,0,137
chr10	6513271	.	ATG	A	10417.30	PASS	AB=0.710;AC=36;AF=0.643;AN=56;BaseQRankSum=-2.629;DP=1146;FS=6.938;HRun=0;HaplotypeScore=321.6824;InbreedingCoeff=0.4162;MQ=46.91;MQ0=38;MQRankSum=2.866;QD=11.92;ReadPosRankSum=5.672;VQSLOD=3.6436;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:18,36:49:56.53:712,57,0	0/1:11,10:21:39.71:230,0,40	0/0:49,0:10:13.73:0,14,104	0/0:56,0:14:11.36:0,11,252	1/1:14,13:28:37.60:429,38,0	1/1:17,7:23:7.38:274,7,0	1/1:23,25:45:21.98:460,22,0	0/1:38,26:45:5.77:719,0,6	0/1:17,27:42:0.65:527,0,1	1/1:21,16:35:15.05:542,15,0	1/1:7,13:20:21.43:259,21,0	0/0:41,0:40:41.97:0,42,695	0/0:28,1:26:15.59:0,16,568	0/0:45,0:41:55.67:0,56,857	0/1:21,19:34:0.86:473,0,1	0/1:11,19:27:10.46:441,0,10	1/1:11,24:34:34.42:498,34,0	1/1:9,19:27:24.65:529,25,0	0/1:19,9:22:34.18:257,0,34	1/1:8,27:35:37.45:405,37,0	1/1:58,77:123:99:1447,118,0	1/1:19,38:56:55.36:769,55,0	0/1:25,1:26:6.55:7,0,345	0/0:48,0:48:82.81:0,83,1372	1/1:12,13:25:22.30:266,22,0	0/1:25,27:49:19.12:719,0,19	1/1:9,9:17:16.08:284,16,0	1/1:10,4:13:0.81:170,1,0
chr10	6513329	.	A	ATGTGTGTG	5076.72	PASS	AB=1.000;AC=22;AF=0.393;AN=56;BaseQRankSum=0.760;DP=851;FS=6.152;HRun=0;HaplotypeScore=302.5229;InbreedingCoeff=0.7967;MQ=50.48;MQ0=8;MQRankSum=-6.867;QD=15.20;ReadPosRankSum=-5.725;VQSLOD=1.7798;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:50:76.79:0,77,2075	1/1:10,2:11:5.91:233,6,0	0/1:36,0:18:26.09:26,0,185	0/0:43,0:36:48.51:0,49,882	1/1:12,2:19:3.35:126,3,0	0/0:25,0:25:51:0,51,1216	0/0:23,0:24:60.21:0,60,1478	1/1:38,0:36:46.66:995,47,0	0/0:41,0:39:35.70:0,36,1253	1/1:27,0:23:23.41:298,23,0	1/1:12,2:14:6.49:252,6,0	0/0:27,0:28:43.67:0,44,964	0/0:23,0:24:30.70:0,31,919	0/0:38,0:36:59.81:0,60,1551	0/0:35,0:34:48.12:0,48,1042	0/0:16,0:18:39.12:0,39,860	0/0:29,0:29:45.12:0,45,1036	1/1:13,1:15:17.97:315,18,0	0/0:21,0:20:39.07:0,39,762	0/1:31,0:33:6.19:6,0,843	1/1:65,12:78:38.34:1110,38,0	0/0:41,0:42:50.12:0,50,1381	0/0:32,0:30:44.55:0,45,1109	0/0:45,0:45:74.81:0,75,1911	0/0:16,0:15:33.11:0,33,856	1/1:22,5:25:16.32:660,16,0	1/1:17,4:23:30.07:845,30,0	1/1:7,1:8:8.98:210,9,0
chr10	6514949	.	A	ATAAG	1709.32	PASS	AB=0.634;AC=23;AF=0.605;AN=38;BaseQRankSum=-5.674;DP=239;FS=59.904;HRun=0;HaplotypeScore=24.7405;InbreedingCoeff=0.6633;MQ=41.68;MQ0=12;MQRankSum=-6.371;QD=17.99;ReadPosRankSum=0.923;VQSLOD=1.2079;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	1/1:1,2:3:3.01:80,3,0	0/0:20,0:13:36.09:0,36,524	0/0:12,0:7:21.06:0,21,359	./.	./.	./.	./.	1/1:3,1:3:3.01:80,3,0	1/1:4,7:8:11.96:203,12,0	1/1:1,4:5:6.02:161,6,0	0/0:9,0:7:21.07:0,21,378	0/0:9,0:9:24.08:0,24,452	0/0:18,0:18:47.78:0,48,779	./.	1/1:1,5:4:6.02:161,6,0	1/1:0,1:1:3.01:80,3,0	./.	1/1:4,0:3:5.99:61,6,0	./.	./.	1/1:2,3:3:3.01:80,3,0	0/0:20,0:19:51:0,51,819	0/0:8,0:8:21:0,21,326	1/1:0,3:4:6.02:161,6,0	1/1:5,8:10:27.06:569,27,0	0/1:11,6:10:1.94:142,0,2	1/1:6,1:1:3.01:81,3,0
chr10	6518007	.	CA	C	936.43	PASS	AC=8;AF=0.500;AN=16;BaseQRankSum=2.949;DP=680;FS=0.000;HRun=1;HaplotypeScore=25.6458;MQ=9.37;MQ0=584;MQRankSum=-0.027;QD=12.16;ReadPosRankSum=-0.882;VQSLOD=1.4095;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	1/1:7,12:10:18.06:250,18,0	./.	./.	./.	./.	1/1:11,6:5:15.05:208,15,0	1/1:6,16:15:39.13:541,39,0	./.	./.	./.	./.	./.	./.	./.	./.	0/0:25,0:15:36.12:0,36,573	./.	0/0:18,0:8:18.06:0,18,286	0/0:35,0:5:9.03:0,9,143	./.	0/0:15,0:7:21.07:0,21,334	1/1:17,2:1:3.01:42,3,0	./.	./.
chr10	6518462	.	CT	C	657.80	PASS	AC=14;AF=0.318;AN=44;BaseQRankSum=7.392;DP=391;FS=0.000;HRun=2;HaplotypeScore=23.0506;InbreedingCoeff=0.7161;MQ=26.38;MQ0=69;MQRankSum=-3.825;QD=8.77;ReadPosRankSum=5.186;VQSLOD=1.0585;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,3:3:6.02:63,6,0	0/0:8,0:3:6.02:0,6,85	./.	./.	0/0:29,0:11:6.02:0,6,71	1/1:5,15:12:18.05:190,18,0	1/1:1,1:1:3.01:32,3,0	0/0:25,0:5:15.05:0,15,239	1/1:1,12:12:24.06:254,24,0	0/0:21,0:11:33.11:0,33,518	0/0:28,0:12:21:0,21,263	0/0:8,0:8:9.03:0,9,143	0/0:17,0:16:6.02:0,6,85	0/0:19,0:18:9.03:0,9,142	1/1:0,14:11:21.01:210,21,0	1/1:3,4:5:3.01:32,3,0	./.	0/0:20,0:9:18.05:0,18,263	1/1:5,9:3:3.01:32,3,0	./.	0/0:19,0:10:12.03:0,12,168	./.	0/0:19,0:7:3.01:0,3,48	0/0:21,0:15:6.01:0,6,72	./.	0/0:19,0:8:21.05:0,21,308	0/0:31,0:12:15.05:0,15,236	0/0:21,0:12:23.99:0,24,283
chr10	6520454	.	A	ATGTGTGTG	3500.02	PASS	AB=0.857;AC=43;AF=0.860;AN=50;BaseQRankSum=-2.830;DP=511;FS=1.624;HRun=0;HaplotypeScore=129.4163;InbreedingCoeff=0.0729;MQ=49.96;MQ0=14;MQRankSum=-1.942;QD=7.85;ReadPosRankSum=-1.069;VQSLOD=2.1776;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:29:1.96:122,2,0	./.	./.	0/1:46,0:12:0:0,0,0	1/1:15,0:15:6.01:144,6,0	0/1:14,0:13:0:1,0,0	1/1:13,0:12:9:109,9,0	1/1:19,0:18:8.01:144,8,0	1/1:6,2:15:3.01:105,3,0	0/1:9,0:9:0:0,0,0	./.	1/1:6,0:6:8.97:71,9,0	0/1:8,0:13:3.75:61,0,4	0/1:13,0:20:6.85:76,0,7	1/1:13,0:13:6.01:90,6,0	1/1:5,2:12:6.49:229,6,0	1/1:14,1:26:9.24:222,9,0	1/1:7,0:7:3.01:115,3,0	1/1:26,0:26:15.51:346,16,0	1/1:16,0:17:2.04:6,2,0	1/1:26,0:22:9.41:66,9,0	1/1:12,2:16:3.48:67,3,0	0/1:7,0:14:6.99:40,0,7	1/1:5,0:19:10.83:180,11,0	0/1:14,0:16:1.04:99,0,1	1/1:12,8:22:29.30:804,29,0	1/1:14,3:20:0.20:403,0,0	1/1:9,0:9:0.47:1,0,0
chr10	6521902	.	A	AGAGGAG	2935.47	PASS	AB=0.617;AC=17;AF=0.304;AN=56;BaseQRankSum=4.044;DP=546;FS=3.638;HRun=0;HaplotypeScore=115.3047;InbreedingCoeff=0.6867;MQ=64.23;MQ0=11;MQRankSum=-3.272;QD=18.46;ReadPosRankSum=-1.289;VQSLOD=3.1926;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:26:54.14:0,54,1023	1/1:1,3:5:5.91:115,6,0	0/0:34,0:13:8.53:0,9,165	0/0:37,0:23:23.87:0,24,408	1/1:4,0:12:15.05:289,15,0	0/0:22,0:23:54.13:0,54,1000	0/0:19,0:19:6.26:0,6,505	0/1:12,0:23:1.79:178,0,2	0/0:21,0:21:57.20:0,57,1126	1/1:10,9:21:33.08:853,33,0	1/1:2,8:11:18.02:486,18,0	0/0:17,0:17:36.11:0,36,664	0/0:16,0:16:39.13:0,39,790	0/0:17,0:17:48.16:0,48,957	0/0:24,0:24:63.19:0,63,1249	0/0:25,0:25:60.19:0,60,1189	0/0:22,0:22:42.69:0,43,785	1/1:6,6:15:0.95:318,1,0	0/0:17,0:16:30.08:0,30,549	0/0:20,0:20:42.05:0,42,735	1/1:7,11:22:12.04:362,12,0	0/0:14,0:14:27.09:0,27,566	0/0:21,0:21:48.16:0,48,998	0/0:25,0:25:60.17:0,60,1137	0/0:9,0:9:24.08:0,24,505	0/1:6,0:18:62.13:216,0,62	0/1:6,0:23:15.84:229,0,16	1/1:2,0:9:13.04:77,13,0
chr10	6522491	.	T	TA	1176.84	PASS	AC=14;AF=0.292;AN=48;BaseQRankSum=-7.312;DP=202;FS=10.142;HRun=7;HaplotypeScore=16.0715;InbreedingCoeff=0.7248;MQ=43.49;MQ0=19;MQRankSum=1.621;QD=25.58;ReadPosRankSum=2.389;VQSLOD=2.2269;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:13:30.04:0,30,290	0/0:3,0:3:9.01:0,9,87	0/0:4,0:3:6.48:0,6,59	./.	0/0:9,0:6:12.02:0,12,116	1/1:0,11:11:30.09:362,30,0	1/1:0,2:2:6.02:72,6,0	0/0:25,0:19:45.07:0,45,435	1/1:0,1:1:3.01:36,3,0	0/0:5,0:4:9.01:0,9,87	0/0:7,0:4:3:0,3,29	0/0:5,0:5:12.02:0,12,116	0/0:3,0:2:6.01:0,6,58	0/0:4,0:4:12.02:0,12,116	./.	1/1:1,1:1:3.01:36,3,0	1/1:4,11:12:30.09:362,30,0	0/0:15,0:12:27.04:0,27,260	1/1:1,10:11:30.09:362,30,0	./.	0/0:4,0:3:9.01:0,9,87	./.	0/0:3,0:1:3:0,3,29	0/0:9,0:9:6.01:0,6,58	1/1:0,4:4:9.03:109,9,0	0/0:8,0:6:15.01:0,15,140	0/0:9,0:9:15.02:0,15,145	0/0:10,0:9:18.03:0,18,174
chr10	6522679	.	TACAC	T	1875.64	PASS	AB=0.794;AC=18;AF=0.333;AN=54;BaseQRankSum=-0.593;DP=402;FS=2.222;HRun=0;HaplotypeScore=80.4619;InbreedingCoeff=0.5231;MQ=63.33;MQ0=8;MQRankSum=-0.117;QD=13.03;ReadPosRankSum=-0.866;VQSLOD=2.8469;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:31:56.88:0,57,1025	1/1:2,3:4:9:117,9,0	./.	0/0:27,0:18:6.02:0,6,93	1/1:1,8:9:12.04:193,12,0	0/0:6,0:19:18.06:0,18,311	0/0:9,0:23:24.08:0,24,438	0/1:19,15:31:13.19:420,0,13	0/0:10,0:17:29.78:0,30,437	1/1:4,6:10:18.04:244,18,0	1/1:4,3:7:5.85:96,6,0	0/1:12,0:12:21.68:22,0,433	0/0:5,0:5:15.05:0,15,361	0/0:11,0:11:14.63:0,15,360	0/0:5,0:12:21.05:0,21,348	0/0:1,0:8:15.05:0,15,260	0/0:9,0:25:23.81:0,24,310	1/1:10,5:15:9.03:145,9,0	0/0:8,0:8:12.04:0,12,230	0/0:7,0:10:17.81:0,18,218	0/1:14,15:29:14.63:401,0,15	0/0:3,0:7:3.01:0,3,52	0/0:4,0:5:6.23:0,6,85	0/0:14,0:14:27.09:0,27,624	0/0:2,0:7:14.08:0,14,216	0/1:11,2:14:70.36:151,0,70	1/1:1,6:8:14.83:220,15,0	1/1:0,1:1:3.01:48,3,0
chr10	6525650	.	CCACA	C	11484.19	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=15.942;DP=674;FS=0.309;HRun=0;HaplotypeScore=117.5931;InbreedingCoeff=0.9984;MQ=78.56;MQ0=0;MQRankSum=-6.341;QD=45.21;ReadPosRankSum=4.158;VQSLOD=5.0382;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,111,2780	0/0:14,0:14:39.13:0,39,1068	0/0:17,0:17:45.14:0,45,1035	0/0:18,0:18:51.01:0,51,1229	0/0:24,0:24:60.21:0,60,1571	1/1:1,22:23:54.13:1006,54,0	1/1:1,15:16:33.11:639,33,0	0/0:30,0:30:87.28:0,87,2151	1/1:1,24:25:66.23:1258,66,0	0/0:30,0:30:87.29:0,87,2275	0/0:24,0:24:60.21:0,60,1640	0/0:20,0:20:57.20:0,57,1516	0/0:23,0:23:66.23:0,66,1691	0/0:24,0:24:72.17:0,72,1757	1/1:1,29:30:84.23:1588,84,0	1/1:0,28:28:72.25:1394,72,0	1/1:2,17:19:39.13:755,39,0	0/0:8,0:8:24.08:0,24,621	1/1:2,22:24:66.20:1169,66,0	1/1:0,31:30:84.13:1433,84,0	0/0:34,0:34:99:0,102,2693	1/1:0,27:27:69.18:1195,69,0	0/0:24,0:24:63.22:0,63,1697	0/0:25,0:25:75.26:0,75,1973	1/1:0,31:31:54.19:1046,54,0	0/0:37,0:37:99:0,111,2884	0/0:21,0:21:60.18:0,60,1548	0/0:8,0:8:18.06:0,18,447
chr10	6532768	.	TA	T	7676.33	PASS	AB=1.000;AC=41;AF=0.759;AN=54;BaseQRankSum=7.430;DP=424;FS=13.251;HRun=10;HaplotypeScore=93.3455;InbreedingCoeff=0.8722;MQ=80.17;MQ0=0;MQRankSum=-2.714;QD=21.38;ReadPosRankSum=2.791;VQSLOD=4.5179;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,24:24:65.86:562,66,0	1/1:0,3:3:9:78,9,0	0/0:15,0:16:3.43:0,3,157	0/1:9,0:8:2.47:2,0,69	1/1:3,32:35:90.24:768,90,0	1/1:1,17:18:38.99:339,39,0	1/1:1,8:9:17.99:156,18,0	1/1:6,27:33:77.93:668,78,0	1/1:1,11:12:32.99:286,33,0	1/1:2,11:13:32.59:270,33,0	1/1:4,19:23:51.45:443,51,0	0/0:10,0:10:27.02:0,27,270	0/0:13,0:13:33.06:0,33,353	0/0:7,0:7:18.04:0,18,192	1/1:0,16:16:44.99:391,45,0	1/1:2,8:11:23.49:191,23,0	1/1:2,26:28:74.98:651,75,0	1/1:1,17:18:50.96:437,51,0	1/1:1,14:15:41.97:360,42,0	1/1:2,16:18:47.96:410,48,0	./.	1/1:1,3:4:9:78,9,0	0/0:7,0:7:12.03:0,12,133	0/0:12,0:12:33.09:0,33,365	1/1:2,11:13:32.99:286,33,0	1/1:2,17:19:50.98:442,51,0	1/1:6,23:29:71.97:621,72,0	1/1:0,9:9:26.99:234,27,0
chr10	6533505	.	G	GA	6455.84	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-11.840;DP=596;FS=8.280;HRun=9;HaplotypeScore=54.9655;InbreedingCoeff=0.9295;MQ=78.63;MQ0=0;MQRankSum=-1.850;QD=26.03;ReadPosRankSum=-0.097;VQSLOD=5.1586;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,28:31:72.19:796,72,0	1/1:3,9:12:4.03:272,4,0	0/0:21,0:21:32.32:0,32,369	0/0:15,0:16:4.06:0,4,206	1/1:2,22:24:40.05:644,40,0	0/0:32,0:32:80.83:0,81,688	0/0:13,1:14:2.40:0,2,237	1/1:8,34:42:76.15:1029,76,0	0/0:24,0:24:65.92:0,66,562	1/1:2,26:28:78.18:849,78,0	1/1:1,23:24:60.16:664,60,0	0/0:16,0:16:47.98:0,48,414	0/0:22,0:22:59.96:0,60,517	0/0:18,0:19:53.01:0,53,445	0/0:23,0:23:65.96:0,66,567	0/0:20,0:20:53.98:0,54,466	0/0:20,0:20:53.98:0,54,469	1/1:3,8:11:24.06:265,24,0	0/0:14,0:14:32.98:0,33,286	0/0:25,0:25:59.94:0,60,515	1/1:1,17:18:33.09:365,33,0	0/0:30,0:30:74.94:0,75,644	0/0:18,0:18:50.97:0,51,439	0/0:18,0:18:50.99:0,51,442	0/0:16,0:16:41.98:0,42,365	1/1:3,27:30:71.23:835,71,0	1/1:4,17:21:25.08:503,25,0	1/1:0,7:7:21.06:232,21,0
chr10	6534790	.	AAGAAACCCCC	A	13508.40	PASS	AB=0.700;AC=21;AF=0.375;AN=56;BaseQRankSum=16.924;DP=680;FS=13.936;HRun=0;HaplotypeScore=212.4602;InbreedingCoeff=0.9177;MQ=86.09;MQ0=0;MQRankSum=-16.065;QD=58.73;ReadPosRankSum=0.369;VQSLOD=3.5864;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,24:31:51.13:1601,51,0	1/1:3,10:13:27.09:890,27,0	0/0:39,0:39:99:0,108,4805	0/0:14,0:14:38.77:0,39,1752	1/1:6,16:22:23.68:732,24,0	0/0:22,0:22:66.23:0,66,3325	0/0:25,0:25:72.23:0,72,3473	1/1:6,19:24:51.07:1370,51,0	0/0:31,0:31:93.32:0,93,4851	1/1:4,39:43:99:3486,111,0	1/1:6,13:19:24.04:592,24,0	0/0:38,0:38:99:0,114,5779	0/0:28,0:28:84.28:0,84,4265	0/0:24,0:24:66.22:0,66,3334	0/0:32,0:32:93.32:0,93,4605	0/0:28,0:28:84.28:0,84,4201	0/0:34,0:34:96.33:0,96,4906	0/1:4,3:7:30.61:189,0,31	0/0:19,0:19:57.17:0,57,2425	0/0:19,0:19:48.16:0,48,2480	1/1:3,15:18:20.55:514,21,0	0/0:23,0:23:66.23:0,66,3484	0/0:24,0:24:69.24:0,69,3638	0/0:41,0:41:99:0,120,5772	0/0:9,0:9:27.09:0,27,1431	1/1:1,20:21:60.21:1861,60,0	1/1:3,23:26:57.20:1878,57,0	1/1:0,5:5:12.04:395,12,0
chr10	6534891	.	TAACCTTCATGTATATGTGCGCCACACACCCTC	T	6436.22	PASS	AC=10;AF=0.217;AN=46;BaseQRankSum=7.702;DP=616;FS=0.697;HRun=0;HaplotypeScore=500.2173;InbreedingCoeff=0.9247;MQ=82.03;MQ0=0;MQRankSum=-7.839;QD=94.65;ReadPosRankSum=3.738;VQSLOD=2.5810;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:60,0:60:99:0,143,16079	./.	0/0:16,0:16:48.16:0,48,3225	0/0:23,0:25:72.17:0,72,4365	./.	0/0:22,0:22:63.22:0,63,8096	0/0:30,0:30:87.28:0,87,9094	1/1:19,0:19:6:70,6,0	0/0:31,0:31:87.30:0,87,11252	1/1:4,5:9:18.06:1341,18,0	./.	0/0:33,0:33:96.32:0,96,11633	0/0:30,0:30:90.30:0,90,10268	0/0:28,0:28:84.29:0,84,10229	0/0:28,0:28:84.29:0,84,10100	0/0:31,0:31:93.32:0,93,10702	0/0:29,0:29:84.29:0,84,8638	1/1:1,2:3:3.01:256,3,0	0/0:26,0:26:78.27:0,78,4772	0/0:27,0:27:81.24:0,81,8949	./.	0/0:22,0:22:63.22:0,63,6639	0/0:24,0:24:72.25:0,72,9032	0/0:39,0:39:99:0,117,12871	0/0:33,0:33:99:0,99,10194	1/1:12,6:18:18.06:1325,18,0	1/1:5,14:19:42.14:3445,42,0	./.
chr10	6534923	.	C	CT	991.14	PASS	AB=0.889;AC=15;AF=0.288;AN=52;BaseQRankSum=0.914;DP=583;FS=5.497;HRun=1;HaplotypeScore=135.9658;InbreedingCoeff=0.7855;MQ=83.77;MQ0=1;MQRankSum=-8.440;QD=16.52;ReadPosRankSum=-5.672;VQSLOD=1.7828;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:14.37:0,14,515	1/1:0,1:1:3.01:47,3,0	0/0:35,0:29:78.24:0,78,1051	0/0:40,0:37:39.98:0,40,1149	./.	0/0:23,0:23:69.23:0,69,965	0/0:38,0:38:99:0,111,1547	1/1:1,12:13:33.11:523,33,0	0/0:32,0:32:96.32:0,96,1342	1/1:5,4:9:8.33:177,8,0	1/1:1,3:4:2.04:6,2,0	0/0:32,0:32:96.28:0,96,1303	0/0:25,0:25:75.20:0,75,995	0/0:26,0:26:78.24:0,78,1070	0/0:30,0:30:90.29:0,90,1239	0/0:26,0:26:75.24:0,75,1031	0/0:19,0:19:57.19:0,57,795	1/1:2,1:3:2.30:46,2,0	0/0:15,0:15:45.15:0,45,628	0/0:24,0:24:72.24:0,72,1006	1/1:1,3:4:2.72:46,3,0	0/0:22,0:22:63.19:0,63,862	0/0:21,0:21:63.21:0,63,880	0/0:34,0:34:99:0,102,1424	0/0:24,0:24:72.23:0,72,990	1/1:8,2:10:11.55:209,12,0	0/1:14,2:16:0.77:98,0,1	./.
chr10	6534957	.	A	AACACAC	5421.57	PASS	AC=20;AF=0.370;AN=54;BaseQRankSum=7.675;DP=694;FS=13.050;HRun=0;HaplotypeScore=204.7593;InbreedingCoeff=0.9497;MQ=61.36;MQ0=4;MQRankSum=-8.368;QD=27.80;ReadPosRankSum=-5.964;VQSLOD=2.1073;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:52:74.15:953,74,0	1/1:1,2:5:6.91:181,7,0	0/0:50,0:31:53.48:0,53,917	0/0:48,0:37:25.64:0,26,786	1/1:7,0:9:9.01:181,9,0	0/0:18,0:18:42.14:0,42,870	0/0:44,0:44:87.25:0,87,1807	1/1:38,0:40:78.21:1472,78,0	0/0:25,0:27:72.23:0,72,1459	1/1:15,1:20:39.12:911,39,0	1/1:3,0:8:12.04:240,12,0	0/0:32,0:32:81.24:0,81,1661	0/0:26,0:26:72.22:0,72,1464	0/0:23,0:24:54.19:0,54,1136	0/0:25,0:26:60.21:0,60,1244	0/0:25,0:25:57.18:0,57,1184	0/0:26,0:27:72.25:0,72,1521	1/1:9,0:11:18.05:371,18,0	0/0:16,0:18:36.11:0,36,690	0/0:24,0:24:66.23:0,66,1401	1/1:9,0:11:5.85:70,6,0	0/0:23,0:23:66.20:0,66,1370	0/0:22,0:24:44.82:0,45,889	0/0:38,0:38:87.28:0,87,1826	0/0:22,0:23:57.19:0,57,1160	1/1:10,2:18:27.09:718,27,0	1/1:18,1:20:12.04:324,12,0	./.
chr10	6535157	.	AT	A	159.17	PASS	AC=6;AF=0.150;AN=40;BaseQRankSum=3.936;DP=368;FS=0.000;HRun=1;HaplotypeScore=41.6865;InbreedingCoeff=0.8783;MQ=77.01;MQ0=0;MQRankSum=-2.808;QD=19.90;ReadPosRankSum=-4.797;VQSLOD=2.1477;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,0:1:3:25,3,0	./.	0/0:23,0:23:69.17:0,69,1008	0/0:25,0:25:55.65:0,56,1000	./.	0/0:24,0:24:72.25:0,72,1143	0/0:15,0:15:42.11:0,42,624	1/1:0,5:5:15.04:186,15,0	0/0:25,0:25:75.24:0,75,1174	./.	./.	0/0:18,0:18:54.18:0,54,863	0/0:15,0:15:45.14:0,45,696	0/0:7,0:7:21.07:0,21,336	0/0:19,0:19:57.19:0,57,903	0/0:22,0:22:66.20:0,66,1010	0/0:24,0:24:69.16:0,69,1015	./.	0/0:24,0:24:72.14:0,72,1085	0/0:26,0:26:75.26:0,75,1196	./.	0/0:21,0:21:60.20:0,60,958	0/0:23,0:23:69.21:0,69,1049	0/0:26,0:26:78.27:0,78,1228	0/0:18,0:18:51.16:0,51,792	./.	1/1:2,0:2:6.01:63,6,0	./.
chr10	6535416	.	CT	C	60.11	PASS	AC=2;AF=0.056;AN=36;BaseQRankSum=3.716;DP=364;FS=0.000;HRun=1;HaplotypeScore=57.1553;InbreedingCoeff=0.9671;MQ=79.34;MQ0=0;MQRankSum=-2.285;QD=15.03;ReadPosRankSum=-2.837;VQSLOD=2.2017;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:25,0:25:61.60:0,62,1010	0/0:17,0:17:47.90:0,48,716	./.	0/0:23,0:23:69.22:0,69,1074	0/0:23,0:23:69.24:0,69,1100	1/1:0,4:4:12.04:144,12,0	0/0:28,0:28:84.29:0,84,1342	./.	./.	0/0:30,0:30:87.30:0,87,1384	0/0:19,0:19:57.19:0,57,892	0/0:22,0:22:66.21:0,66,1029	0/0:27,0:27:81.28:0,81,1289	0/0:23,0:23:69.24:0,69,1100	0/0:27,0:27:81.28:0,81,1274	./.	0/0:16,0:16:48.15:0,48,743	0/0:20,0:20:54.15:0,54,810	./.	0/0:11,0:11:33.11:0,33,525	0/0:20,0:20:60.20:0,60,957	0/0:10,0:10:30.10:0,30,479	0/0:19,0:19:57.18:0,57,886	./.	./.	./.
chr10	6535943	.	C	CA	4688.52	PASS	AB=0.696;AC=19;AF=0.559;AN=34;BaseQRankSum=-8.456;DP=323;FS=4.711;HRun=10;HaplotypeScore=55.6298;InbreedingCoeff=0.8782;MQ=75.44;MQ0=2;MQRankSum=-1.207;QD=20.56;ReadPosRankSum=2.820;VQSLOD=5.9623;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:7,0:6:14.56:0,15,104	0/0:10,0:10:13.44:0,13,96	./.	1/1:10,19:29:20.47:423,20,0	1/1:6,10:17:36.03:363,36,0	./.	1/1:1,16:17:42.11:448,42,0	./.	./.	0/0:8,0:8:17.94:0,18,144	0/0:16,0:16:35.91:0,36,291	0/0:17,1:20:16.98:0,17,318	1/1:4,26:30:50.48:729,50,0	1/1:4,15:19:17.46:391,17,0	1/1:4,17:21:47.99:494,48,0	./.	0/1:9,7:15:6.92:236,0,7	1/1:9,27:36:56.48:779,56,0	./.	1/1:2,19:21:26.48:487,26,0	0/0:19,0:19:44.94:0,45,369	0/0:14,0:14:35.96:0,36,296	1/1:7,14:22:13.30:338,13,0	./.	./.	./.
chr10	6536553	.	A	AACAC	807.92	PASS	AB=0.879;AC=11;AF=0.367;AN=30;BaseQRankSum=-0.420;DP=364;FS=3.333;HRun=0;HaplotypeScore=113.7207;InbreedingCoeff=0.3098;MQ=57.04;MQ0=14;MQRankSum=0.242;QD=5.25;ReadPosRankSum=-2.512;VQSLOD=2.1033;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	./.	0/0:21,0:21:5.10:0,5,376	0/1:19,0:18:10.97:11,0,128	./.	0/1:14,0:16:1.28:1,0,305	./.	./.	1/1:23,0:23:9.90:152,10,0	0/1:9,1:13:28.65:160,0,29	0/1:7,0:15:6.48:6,0,22	0/0:21,0:23:26.92:0,27,320	0/0:22,0:23:21.06:0,21,297	0/0:14,0:16:32.73:0,33,407	./.	0/1:16,0:16:11.77:12,0,106	0/0:21,0:21:20:0,20,294	./.	0/0:27,0:27:30.57:0,31,521	1/1:13,9:25:11.66:224,12,0	1/1:10,11:25:17.80:366,18,0	0/0:26,0:28:36.57:0,37,502	./.	./.	./.
chr10	6536570	.	A	ACACA	802.13	PASS	AB=1.000;AC=10;AF=0.333;AN=30;BaseQRankSum=-3.304;DP=379;FS=3.318;HRun=0;HaplotypeScore=100.8994;InbreedingCoeff=0.3748;MQ=54.00;MQ0=19;MQRankSum=0.570;QD=5.38;ReadPosRankSum=0.087;VQSLOD=2.1452;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	./.	0/0:21,0:21:5.10:0,5,376	0/1:23,0:22:10.97:11,0,128	./.	0/0:16,0:16:24.07:0,24,332	./.	./.	1/1:17,4:22:9.02:150,9,0	0/1:17,0:15:28.17:159,0,28	0/1:14,0:14:6.48:6,0,22	0/0:23,0:23:27.02:0,27,320	0/0:23,0:23:21.53:0,22,299	0/0:18,0:18:32.68:0,33,406	./.	0/1:20,0:19:10.97:11,0,107	0/0:23,0:22:19.78:0,20,295	./.	0/0:26,0:26:30.57:0,31,521	1/1:23,0:23:11.77:225,12,0	1/1:30,0:30:17.80:366,18,0	0/0:29,0:29:36.57:0,37,502	./.	./.	./.
chr10	6537506	.	C	CGTT	2107.15	PASS	AB=0.825;AC=11;AF=0.250;AN=44;BaseQRankSum=-6.640;DP=607;FS=0.000;HRun=0;HaplotypeScore=100.2479;InbreedingCoeff=0.3162;MQ=69.37;MQ0=9;MQRankSum=2.224;QD=12.62;ReadPosRankSum=-1.010;VQSLOD=2.7902;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:15,0:32:4.84:5,0,33	0/0:3,0:10:5.95:0,6,42	./.	./.	./.	0/0:19,0:18:15.05:0,15,194	0/0:25,0:25:33.06:0,33,412	./.	0/0:31,0:31:24.06:0,24,298	0/0:11,0:17:11.90:0,12,84	./.	1/1:10,11:21:21.07:401,21,0	1/1:13,11:24:24.55:459,25,0	0/1:20,12:34:7.88:474,0,8	0/0:21,0:23:24.03:0,24,281	0/0:23,0:24:26.54:0,27,318	0/0:26,0:26:23.51:0,24,469	0/0:9,0:16:5.95:0,6,42	0/0:14,0:13:9.03:0,9,118	0/0:11,0:11:9.03:0,9,110	0/0:23,0:37:2.98:0,3,21	1/1:3,2:5:5.98:77,6,0	0/1:9,4:13:32.73:51,0,33	0/1:16,16:34:34.27:751,0,34	0/0:20,0:23:30.01:0,30,354	0/0:12,0:26:8.93:0,9,62	./.	0/1:2,0:4:12.04:32,0,12
chr10	6538351	.	G	GAGAAACTCAA	29445.01	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=0.756;DP=673;FS=10.198;HRun=0;HaplotypeScore=228.4404;InbreedingCoeff=0.9994;MQ=68.50;MQ0=0;MQRankSum=-19.209;QD=115.93;ReadPosRankSum=-3.103;VQSLOD=3.5488;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,4:12:27.09:1041,27,0	1/1:1,8:11:24.04:1137,24,0	0/0:19,0:19:51.17:0,51,1614	0/0:18,0:18:34.58:0,35,828	1/1:9,26:35:96.19:4416,96,0	0/0:31,0:31:87.26:0,87,2748	0/0:20,0:20:60.16:0,60,1563	1/1:26,13:38:99:4386,99,0	0/0:25,0:25:75.26:0,75,2472	1/1:15,16:31:81.23:3637,81,0	1/1:12,13:25:64.10:2646,64,0	0/0:26,0:26:75.24:0,75,2352	0/0:26,0:26:75.26:0,75,2413	0/0:23,0:23:66.23:0,66,2137	0/0:16,0:16:45.15:0,45,1487	0/0:34,0:34:99:0,99,3067	0/0:25,0:25:72.20:0,72,2105	1/1:9,5:14:38.96:1311,39,0	0/0:19,0:19:57.18:0,57,1742	0/0:34,0:34:96.30:0,96,2976	1/1:11,3:14:29.91:756,30,0	0/0:20,0:20:60.20:0,60,1850	0/0:26,0:26:75.23:0,75,2315	0/0:27,0:27:55.37:0,55,2439	0/0:30,0:30:87.24:0,87,2486	1/1:17,18:35:99:4879,105,0	1/1:9,19:28:81.20:3638,81,0	1/1:0,10:10:30.10:1597,30,0
chr10	6538392	.	CTCTGCCCATACCTAT	C	18510.45	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=17.720;DP=629;FS=2.999;HRun=0;HaplotypeScore=302.3178;InbreedingCoeff=0.9656;MQ=60.82;MQ0=0;MQRankSum=-16.125;QD=94.44;ReadPosRankSum=1.965;VQSLOD=4.3338;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,8:10:24.06:1080,24,0	1/1:2,3:5:9.03:405,9,0	0/0:29,0:29:84.29:0,84,4969	0/0:23,0:23:60.21:0,60,3477	1/1:5,22:27:63.22:2581,63,0	0/0:27,0:27:81.28:0,81,5972	0/0:22,0:22:60.21:0,60,4236	1/1:7,19:26:57.17:2130,57,0	0/0:21,0:21:63.22:0,63,4520	1/1:5,26:31:78.25:3308,78,0	1/1:4,22:26:57.20:2564,57,0	0/0:25,0:25:75.26:0,75,5414	0/0:28,0:28:84.29:0,84,5586	0/0:17,0:17:51.18:0,51,3792	0/0:19,0:19:57.20:0,57,4017	0/0:32,0:32:93.32:0,93,6436	0/0:28,0:28:78.20:0,78,5063	1/1:4,6:10:15.05:675,15,0	0/0:23,0:23:60.20:0,60,3634	0/0:36,0:36:99:0,108,7496	1/1:1,4:5:9.03:310,9,0	0/0:25,0:25:72.25:0,72,5123	0/0:25,0:25:75.24:0,75,5100	0/0:25,0:25:75.26:0,75,5173	0/0:28,0:28:78.27:0,78,5268	1/1:8,26:34:78.27:3435,78,0	1/1:4,14:18:39.13:1755,39,0	1/1:2,2:4:6.02:270,6,0
chr10	6538935	.	G	GA	1823.98	PASS	AB=0.657;AC=24;AF=0.429;AN=56;BaseQRankSum=-8.769;DP=562;FS=3.464;HRun=14;HaplotypeScore=98.9334;InbreedingCoeff=0.5130;MQ=67.56;MQ0=11;MQRankSum=2.102;QD=5.98;ReadPosRankSum=-2.576;VQSLOD=2.3555;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:22:29.13:0,29,125	0/0:3,0:15:26.35:0,26,76	0/0:34,0:9:5.06:0,5,65	0/1:31,0:14:15.19:16,0,15	0/0:7,0:26:36.38:0,36,104	1/1:4,12:16:15:132,15,0	0/1:5,9:14:1.24:111,0,1	0/0:8,0:21:24.04:0,24,68	0/1:6,12:18:7.27:67,0,7	0/0:4,0:18:30.41:0,30,88	0/0:7,0:22:30.22:0,30,88	0/1:5,12:18:8.79:109,0,9	1/1:5,12:17:7.55:56,8,0	1/1:11,0:11:17.96:147,18,0	1/1:2,14:16:9:79,9,0	0/1:6,16:22:0.94:174,0,1	0/1:5,13:17:39.09:61,0,39	0/0:4,0:18:28.41:0,28,82	0/1:12,12:24:2.99:210,0,3	1/1:12,16:28:19.18:232,19,0	0/0:1,0:14:22.33:0,22,64	0/1:9,15:24:1.25:209,0,1	1/1:4,12:16:15:133,15,0	1/1:3,2:6:8.84:67,9,0	1/1:9,15:25:17.40:213,17,0	0/0:6,0:26:40.37:0,40,116	0/0:4,0:22:32.26:0,32,93	0/0:0,0:17:34.63:0,35,100
chr10	6539323	.	G	GTACCCCAAGGAACACAACAC	58705.54	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=2.856;DP=665;FS=0.932;HRun=0;HaplotypeScore=316.0001;InbreedingCoeff=0.9996;MQ=76.56;MQ0=0;MQRankSum=-19.836;QD=195.04;ReadPosRankSum=-0.485;VQSLOD=4.3698;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:18,12:33:78.27:6138,78,0	1/1:7,6:13:39.13:3207,39,0	0/0:24,0:24:71.05:0,71,2693	0/0:18,0:18:46.94:0,47,1571	1/1:23,6:35:75.26:4328,75,0	0/0:24,0:24:72.25:0,72,3837	0/0:14,0:14:42.14:0,42,2288	1/1:39,0:39:99:7378,117,0	0/0:21,0:21:63.20:0,63,3011	1/1:13,18:33:99:8582,99,0	1/1:19,7:28:72.25:4701,72,0	0/0:16,0:16:48.15:0,48,2509	0/0:23,0:23:66.21:0,66,3194	0/0:26,0:26:78.25:0,78,3865	0/0:27,0:27:78.21:0,78,3949	0/0:18,0:18:51.18:0,51,2878	0/0:33,0:33:93.32:0,93,4901	1/1:8,3:13:33.11:2675,33,0	0/0:17,0:17:51.18:0,51,2723	0/0:28,0:28:72.21:0,72,3046	1/1:8,1:15:24.08:1703,24,0	0/0:27,0:27:75.26:0,75,4010	0/0:19,0:19:57.20:0,57,3101	0/0:15,0:15:45.15:0,45,2527	0/0:14,0:14:39.12:0,39,1792	1/1:26,9:36:99:8458,105,0	1/1:30,11:46:99:8629,120,0	1/1:3,7:10:30.10:2907,30,0
chr10	6542920	.	TG	T	841.06	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.454;DP=626;FS=0.000;HRun=4;HaplotypeScore=57.9886;InbreedingCoeff=0.9997;MQ=67.86;MQ0=2;MQRankSum=0.636;QD=28.04;ReadPosRankSum=3.512;VQSLOD=3.0611;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,29:30:78.24:936,78,0	0/0:15,0:15:39.13:0,39,545	0/0:26,0:25:65.63:0,66,850	0/0:20,0:15:42.11:0,42,555	0/0:22,0:22:54.18:0,54,755	0/0:23,0:23:66.22:0,66,923	0/0:24,0:24:66.20:0,66,904	0/0:28,0:28:78.26:0,78,1093	0/0:15,0:15:42.13:0,42,571	0/0:18,0:18:54.18:0,54,756	0/0:22,0:22:60.20:0,60,839	0/0:22,0:22:66.21:0,66,907	0/0:21,0:21:60.20:0,60,840	0/0:26,0:26:78.26:0,78,1082	0/0:21,0:21:63.20:0,63,865	0/0:24,0:24:66.22:0,66,919	0/0:32,0:32:96.32:0,96,1334	0/0:25,0:25:60.20:0,60,834	0/0:26,0:25:66.20:0,66,906	0/0:31,0:31:90.30:0,90,1259	0/0:21,0:21:60.20:0,60,834	0/0:20,0:19:54.17:0,54,737	0/0:16,0:16:45.15:0,45,628	0/0:13,0:13:36.08:0,36,481	0/0:23,0:23:69.23:0,69,965	0/0:21,0:21:62.86:0,63,818	0/0:28,0:28:78.26:0,78,1081	0/0:13,0:12:39.13:0,39,546
chr10	6543798	.	G	GT	21247.18	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-10.231;DP=702;FS=4.203;HRun=5;HaplotypeScore=62.5583;InbreedingCoeff=0.9788;MQ=60.22;MQ0=4;MQRankSum=4.535;QD=34.77;ReadPosRankSum=3.117;VQSLOD=5.1749;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,111,1192	1/1:1,8:9:24.08:312,24,0	0/0:28,0:22:59.75:0,60,596	0/0:24,0:21:40.41:0,40,499	1/1:3,21:24:60.20:790,60,0	1/1:0,21:21:60.20:790,60,0	1/1:6,24:30:69.18:886,69,0	1/1:4,33:34:93.29:1208,93,0	1/1:1,19:20:57.19:750,57,0	1/1:3,28:31:87.26:1128,87,0	1/1:2,26:28:78.25:1024,78,0	1/1:0,21:21:60.20:790,60,0	1/1:0,15:15:39.12:513,39,0	1/1:3,27:30:84.26:1084,84,0	1/1:1,24:25:66.21:869,66,0	1/1:1,29:30:78.25:1026,78,0	1/1:2,39:41:99:1460,111,0	1/1:0,27:27:75.24:984,75,0	1/1:4,21:23:60.17:772,60,0	1/1:1,24:25:66.21:869,66,0	1/1:1,15:16:45.15:592,45,0	1/1:3,31:35:96.23:1217,96,0	1/1:0,16:16:45.15:591,45,0	1/1:1,21:22:60.20:790,60,0	1/1:0,25:25:69.22:908,69,0	1/1:0,25:25:75.24:987,75,0	1/1:4,21:25:60.18:790,60,0	1/1:0,8:8:9.03:118,9,0
chr10	6544392	.	TAAAA	T	7028.39	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-13.400;DP=583;FS=32.736;HRun=13;HaplotypeScore=123.9554;InbreedingCoeff=0.9910;MQ=61.64;MQ0=2;MQRankSum=-2.263;QD=32.24;ReadPosRankSum=4.148;VQSLOD=1.4383;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:3,0:25:54.18:0,54,1030	0/0:1,0:7:14.62:0,15,85	0/0:10,0:9:15.05:0,15,279	0/0:14,0:7:15.05:0,15,293	0/0:3,0:17:38.28:0,38,271	1/1:2,27:29:66.20:965,66,0	1/1:2,17:19:39.11:570,39,0	0/0:13,0:45:84.88:0,85,512	1/1:3,22:25:57.15:834,57,0	0/0:2,0:24:59.39:0,59,360	0/0:1,0:14:35.31:0,35,248	0/0:4,0:16:33.11:0,33,462	0/0:3,0:19:51.07:0,51,614	0/0:8,0:15:27.04:0,27,343	1/1:4,17:21:39.10:570,39,0	1/1:1,13:14:30.09:438,30,0	1/1:5,24:29:60.15:877,60,0	0/0:6,0:25:50.64:0,51,331	1/1:2,19:21:56.64:746,57,0	1/1:5,25:30:66.10:933,66,0	0/0:2,0:17:32.17:0,32,188	1/1:1,15:16:45.14:657,45,0	0/0:2,0:21:60.18:0,60,743	0/0:3,0:22:54.30:0,54,692	1/1:2,11:13:30.09:439,30,0	0/0:6,0:30:67.03:0,67,462	0/0:2,0:35:53.30:0,53,354	0/0:2,0:6:17.79:0,18,169
chr10	6544728	.	T	TG	10016.99	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-11.762;DP=740;FS=1.293;HRun=1;HaplotypeScore=79.4018;InbreedingCoeff=0.9785;MQ=62.33;MQ0=1;MQRankSum=1.689;QD=39.13;ReadPosRankSum=2.538;VQSLOD=5.5646;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,156,1994	0/0:10,0:10:21.07:0,21,272	0/0:31,0:21:56.31:0,56,641	0/0:36,2:27:35.97:0,36,765	0/0:27,0:27:72.20:0,72,905	1/1:0,24:24:69.23:1034,69,0	1/1:1,29:30:81.27:1214,81,0	0/0:37,0:37:99:0,108,1390	1/1:0,21:21:60.20:899,60,0	0/0:18,0:18:54.18:0,54,699	0/0:12,0:12:36.12:0,36,467	0/0:24,0:24:72.23:0,72,934	0/0:21,0:21:63.20:0,63,818	0/0:24,0:24:69.22:0,69,896	1/1:2,20:22:57.19:854,57,0	1/1:1,35:36:99:1500,102,0	1/1:3,39:42:99:1663,111,0	0/0:15,1:16:7.24:0,7,528	1/1:4,14:15:36.11:517,36,0	1/1:0,26:26:63.21:943,63,0	0/0:44,0:44:99:0,126,1620	1/1:2,20:22:54.18:808,54,0	0/0:27,0:27:75.23:0,75,958	0/0:35,0:35:99:0,102,1305	1/1:0,15:15:39.13:584,39,0	0/0:35,0:35:99:0,105,1350	0/0:26,0:26:78.25:0,78,1013	0/0:4,0:4:9.03:0,9,117
chr10	6545149	.	TA	T	1719.68	PASS	AB=0.785;AC=17;AF=0.327;AN=52;BaseQRankSum=3.921;DP=650;FS=4.269;HRun=13;HaplotypeScore=74.2146;InbreedingCoeff=0.6231;MQ=33.99;MQ0=88;MQRankSum=-6.284;QD=6.82;ReadPosRankSum=-1.354;VQSLOD=2.3997;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:30.53:0,31,152	1/1:6,9:11:26.60:177,27,0	./.	./.	0/1:15,12:24:7.34:169,0,7	0/0:21,0:19:35.84:0,36,329	0/0:27,0:19:41.81:0,42,361	1/1:9,7:10:14.90:109,15,0	0/0:10,0:10:24.04:0,24,233	1/1:12,13:20:1.66:255,2,0	1/1:10,20:25:59.60:432,60,0	0/0:3,0:14:17.04:0,17,85	0/0:4,0:15:20.04:0,20,110	0/0:11,0:16:19.83:0,20,106	0/0:17,2:18:5.11:0,5,197	0/0:23,1:24:20.69:0,21,349	0/0:52,0:40:20.22:0,20,247	1/1:15,3:13:5.96:44,6,0	0/0:14,0:9:27.04:0,27,263	0/0:28,1:28:32.06:0,32,438	1/1:25,3:24:2.83:18,3,0	0/0:19,0:18:26.86:0,27,252	0/0:13,0:31:37.19:0,37,196	0/0:10,0:13:5.68:0,6,29	0/0:18,1:14:5.12:0,5,202	0/1:20,10:26:4.92:215,0,5	1/1:17,16:32:59.53:426,60,0	0/1:26,3:20:43.56:51,0,44
chr10	6545260	.	CA	C	5520.89	PASS	AB=0.594;AC=47;AF=0.839;AN=56;BaseQRankSum=0.170;DP=513;FS=13.143;HRun=12;HaplotypeScore=59.2060;InbreedingCoeff=0.2948;MQ=61.81;MQ0=5;MQRankSum=0.043;QD=11.50;ReadPosRankSum=3.274;VQSLOD=3.0157;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,0:20:25.52:91,26,0	1/1:4,0:7:9.96:29,10,0	0/0:22,0:10:13.08:0,13,118	0/0:11,0:5:11.99:0,12,105	1/1:8,26:33:32.20:434,32,0	1/1:5,18:23:20.37:341,20,0	0/1:4,11:15:49.44:213,0,49	1/1:7,12:19:7.43:231,7,0	0/1:3,14:17:22.04:217,0,22	1/1:5,14:18:35.80:279,36,0	1/1:5,23:28:54.31:496,54,0	1/1:1,0:18:24.31:70,24,0	1/1:2,3:17:26.34:105,26,0	1/1:1,0:15:21.26:69,21,0	1/1:5,14:18:29.86:232,30,0	1/1:1,11:14:33.96:244,34,0	1/1:3,17:18:17.38:318,17,0	1/1:1,8:9:23.91:186,24,0	0/1:3,8:10:3.47:159,0,3	1/1:7,13:20:7.43:231,7,0	0/1:2,4:6:14.96:78,0,15	1/1:3,15:18:11.40:271,11,0	1/1:5,2:22:28.18:111,28,0	1/1:0,0:12:16.30:47,16,0	1/1:12,16:25:8.38:248,8,0	1/1:8,19:24:56.37:428,56,0	0/1:12,12:23:41.27:232,0,41	1/1:2,7:7:20.92:163,21,0
chr10	6545527	.	TTAC	T	4070.01	PASS	AB=0.932;AC=48;AF=0.960;AN=50;BaseQRankSum=6.015;DP=594;FS=9.101;HRun=0;HaplotypeScore=118.4945;InbreedingCoeff=-0.0736;MQ=69.84;MQ0=6;MQRankSum=-0.301;QD=7.92;ReadPosRankSum=1.319;VQSLOD=2.5837;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:21:17.85:125,18,0	1/1:5,0:9:2.98:21,3,0	./.	./.	1/1:18,0:28:17.85:125,18,0	1/1:12,8:21:12:137,12,0	1/1:7,10:17:15.05:194,15,0	./.	1/1:14,5:19:23.99:261,24,0	1/1:16,8:24:24.05:289,24,0	1/1:13,8:22:27.05:331,27,0	1/1:18,5:27:26.99:295,27,0	1/1:13,0:20:8.93:63,9,0	1/1:13,0:23:20.82:146,21,0	1/1:4,4:9:11.87:130,12,0	0/1:20,2:22:67.98:68,0,367	1/1:3,6:9:15.05:194,15,0	1/1:8,0:8:2.10:19,2,0	1/1:12,3:15:9:100,9,0	1/1:19,14:35:48.09:584,48,0	0/1:34,2:36:41.30:41,0,529	1/1:15,8:23:18.06:232,18,0	1/1:20,0:25:11.72:75,12,0	1/1:7,0:12:2.98:21,3,0	1/1:13,10:23:18.06:232,18,0	1/1:18,0:23:14.88:105,15,0	1/1:15,0:33:35.35:242,35,0	1/1:6,0:8:5.95:42,6,0
chr10	6546418	.	AC	A	9625.13	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=15.197;DP=676;FS=0.000;HRun=1;HaplotypeScore=75.3374;InbreedingCoeff=0.9953;MQ=88.00;MQ0=0;MQRankSum=-5.999;QD=38.19;ReadPosRankSum=2.891;VQSLOD=5.4453;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,141,2193	0/0:13,0:13:39.13:0,39,623	0/0:35,0:34:96.22:0,96,1396	0/0:34,0:34:92.90:0,93,1343	0/0:27,0:27:81.28:0,81,1287	1/1:0,35:35:99:1384,99,0	1/1:0,25:25:72.24:1007,72,0	0/0:21,0:21:63.18:0,63,943	1/1:0,27:27:75.25:1049,75,0	0/0:22,0:22:66.23:0,66,1054	0/0:20,0:20:60.20:0,60,956	0/0:32,0:32:96.30:0,96,1486	0/0:16,0:16:45.13:0,45,671	0/0:17,0:17:48.13:0,48,739	1/1:0,24:24:63.21:881,63,0	1/1:0,21:21:60.20:839,60,0	1/1:0,33:33:90.30:1250,90,0	0/0:11,0:11:33.11:0,33,527	1/1:0,19:19:57.12:725,57,0	1/1:2,33:35:99:1400,105,0	0/0:35,0:35:99:0,105,1675	1/1:0,21:21:45.15:629,45,0	0/0:20,0:20:60.20:0,60,952	0/0:14,0:14:42.14:0,42,665	1/1:0,12:12:33.11:461,33,0	0/0:23,0:23:69.24:0,69,1102	0/0:33,0:32:98.96:0,99,1459	0/0:4,0:4:12.04:0,12,191
chr10	6547499	.	GA	G	2290.36	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=11.954;DP=552;FS=0.000;HRun=8;HaplotypeScore=50.5495;InbreedingCoeff=0.9313;MQ=66.33;MQ0=1;MQRankSum=-0.498;QD=21.41;ReadPosRankSum=2.093;VQSLOD=3.8273;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:81.25:0,81,979	0/0:3,0:3:9.03:0,9,109	1/1:6,0:4:2.95:19,3,0	0/0:11,0:10:6.02:0,6,67	0/0:18,0:18:48.13:0,48,559	0/0:31,0:31:84.26:0,84,1015	0/0:15,0:15:39.12:0,39,471	0/0:36,0:36:87.27:0,87,1051	0/0:16,0:16:39.12:0,39,471	0/0:26,0:26:72.22:0,72,870	0/0:19,0:19:54.14:0,54,627	1/1:4,13:17:39.01:366,39,0	1/1:4,19:23:54.08:521,54,0	1/1:2,19:21:57.09:550,57,0	0/0:17,0:17:42.12:0,42,497	0/0:17,0:17:48.15:0,48,580	0/0:23,0:23:66.16:0,66,781	0/0:24,0:24:63.19:0,63,761	0/0:17,0:18:48.01:0,48,558	0/0:17,0:17:45.14:0,45,544	0/0:25,0:25:63.10:0,63,698	0/0:20,0:20:60.18:0,60,725	1/1:0,14:14:42.07:405,42,0	1/1:3,23:26:63.09:608,63,0	0/0:15,0:15:42.11:0,42,494	0/0:22,0:22:57.17:0,57,689	0/0:30,0:30:81.25:0,81,977	0/0:12,0:12:33.10:0,33,399
chr10	6548852	.	GACACACACAC	G	338.63	PASS	AB=1.000;AC=9;AF=0.346;AN=26;BaseQRankSum=0.851;DP=252;FS=0.000;HRun=0;HaplotypeScore=46.0460;InbreedingCoeff=0.3510;MQ=20.55;MQ0=141;MQRankSum=-0.676;QD=6.64;ReadPosRankSum=2.450;VQSLOD=0.9208;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	1/1:5,1:6:6.02:158,6,0	./.	./.	./.	0/0:7,0:5:2.94:0,3,20	1/1:9,4:7:4.43:174,4,0	0/0:6,0:4:0:0,0,0	0/1:4,0:3:0:0,0,0	0/0:7,0:4:0.47:0,0,1	./.	0/0:10,0:6:0:0,0,0	0/0:12,0:7:3.01:0,3,101	./.	./.	./.	0/1:8,0:5:0:0,0,0	./.	0/1:12,0:10:0.01:0,0,0	./.	./.	0/0:9,0:9:0:0,0,0	0/0:9,0:4:3.01:0,3,35	1/1:6,1:4:2.06:87,2,0	./.
chr10	6549105	.	TACAC	T	418.77	PASS	AB=0.571;AC=9;AF=0.643;AN=14;BaseQRankSum=-0.930;DP=53;FS=6.368;HRun=0;HaplotypeScore=18.5297;MQ=20.27;MQ0=35;MQRankSum=-0.592;QD=26.17;ReadPosRankSum=0.592;VQSLOD=1.6417;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,1:1:3.01:51,3,0	0/1:1,3:4:63.19:142,0,63	./.	0/0:6,0:3:3.01:0,3,52	./.	./.	./.	./.	./.	1/1:1,1:1:3.01:52,3,0	./.	./.	./.	./.	./.	./.	./.	0/0:0,0:1:2.80:0,3,13	./.	./.	./.	./.	./.	./.	./.	1/1:3,3:3:9.03:154,9,0	./.	1/1:0,2:2:6.02:103,6,0
chr10	6550259	.	CAAAATAAATAAATAAATAAATA	C	80.35	PASS	AB=1.000;AC=3;AF=0.167;AN=18;BaseQRankSum=0.290;DP=81;FS=5.563;HRun=0;HaplotypeScore=46.2581;MQ=23.88;MQ0=19;MQRankSum=0.355;QD=2.59;ReadPosRankSum=0.484;VQSLOD=0.8332;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:5:1.82:0,2,5	./.	./.	./.	./.	./.	./.	0/1:21,0:10:60.70:61,0,80	0/0:1,0:1:3.01:0,3,189	./.	./.	./.	0/0:1,0:1:3.01:0,3,197	./.	./.	0/0:1,0:1:2.60:0,3,10	0/0:7,0:7:5.98:0,6,48	0/0:8,0:8:4.83:0,5,71	1/1:5,5:7:11.67:102,12,0	./.	./.	./.	./.	./.	./.	./.	0/0:2,0:2:3.01:0,3,191	./.
chr10	6550260	.	AAAATAAATAAATAAATAAAT	A	121.13	PASS	AC=4;AF=0.182;AN=22;BaseQRankSum=-0.906;DP=77;FS=6.008;HRun=0;HaplotypeScore=46.7302;InbreedingCoeff=0.3888;MQ=23.53;MQ0=19;MQRankSum=0.453;QD=4.33;ReadPosRankSum=2.264;VQSLOD=0.7125;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:4:1.25:0,1,3	./.	./.	./.	./.	./.	0/0:3,0:1:3.01:0,3,186	1/1:14,5:8:14.96:181,15,0	0/0:0,0:1:3.01:0,3,182	./.	./.	./.	0/0:1,0:1:3.01:0,3,182	0/0:3,0:3:6.02:0,6,418	./.	0/0:0,0:1:1.25:0,1,3	0/0:6,0:7:5.95:0,6,42	0/0:7,0:8:3.01:0,3,44	1/1:8,0:6:5.45:28,5,0	./.	./.	./.	./.	./.	./.	./.	0/0:2,0:2:3.01:0,3,185	./.
chr10	6550283	.	A	ATAAG	318.39	PASS	AB=0.824;AC=18;AF=0.600;AN=30;BaseQRankSum=1.989;DP=76;FS=8.162;HRun=0;HaplotypeScore=28.2204;InbreedingCoeff=0.2351;MQ=30.19;MQ0=13;MQRankSum=-0.321;QD=5.59;ReadPosRankSum=0.545;VQSLOD=-0.7542;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:5:11.73:0,12,74	./.	./.	0/0:2,0:2:3.01:0,3,40	./.	./.	1/1:3,0:2:2.94:18,3,0	0/1:25,0:11:3.81:120,0,4	1/1:1,0:1:3.01:43,3,0	./.	./.	./.	0/0:1,0:1:2.84:0,3,14	1/1:2,0:2:5.85:34,6,0	./.	1/1:2,0:2:0.32:4,0,0	0/0:4,0:4:0.57:0,1,23	0/1:5,6:11:28.90:37,0,29	1/1:8,0:5:5.45:28,5,0	./.	0/0:1,0:1:2.60:0,3,10	./.	./.	./.	./.	1/1:2,0:2:3:26,3,0	1/1:0,1:1:3.01:72,3,0	1/1:2,0:2:5.96:43,6,0
chr10	6550302	.	AAT	A	269.83	PASS	AB=0.583;AC=11;AF=0.239;AN=46;BaseQRankSum=1.470;DP=111;FS=5.847;HRun=0;HaplotypeScore=27.0424;InbreedingCoeff=0.3689;MQ=49.91;MQ0=7;MQRankSum=-2.360;QD=12.26;ReadPosRankSum=0.469;VQSLOD=2.3299;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:5:15.05:0,15,206	0/0:1,0:1:3.01:0,3,44	0/0:2,0:2:6.02:0,6,88	0/0:4,0:4:8.05:0,8,94	0/0:1,0:1:3.01:0,3,44	./.	1/1:4,0:3:2.98:21,3,0	0/0:34,0:24:63.19:0,63,908	1/1:1,1:2:6.02:77,6,0	0/0:4,0:4:6.02:0,6,88	0/0:4,0:4:9.03:0,9,119	0/0:1,0:1:3.01:0,3,44	0/0:4,0:4:9.01:0,9,111	0/0:3,0:3:9.03:0,9,152	1/1:0,1:1:3.01:45,3,0	1/1:0,1:1:3.01:46,3,0	0/1:2,5:7:29.61:167,0,30	0/0:10,0:10:4.65:0,5,87	1/1:7,0:3:3.01:40,3,0	./.	0/0:2,0:2:3.01:0,3,44	./.	./.	0/0:2,0:2:6.02:0,6,88	./.	0/0:5,0:5:12.04:0,12,190	0/0:1,0:1:3.01:0,3,40	0/0:2,0:2:6.02:0,6,116
chr10	6550304	.	T	TAA	353.07	PASS	AB=1.000;AC=11;AF=0.239;AN=46;BaseQRankSum=1.904;DP=118;FS=8.078;HRun=3;HaplotypeScore=27.7075;InbreedingCoeff=0.4253;MQ=50.52;MQ0=7;MQRankSum=-2.598;QD=15.35;ReadPosRankSum=0.023;VQSLOD=-0.0091;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:5:15.05:0,15,205	0/0:1,0:1:3.01:0,3,44	0/0:3,0:3:9.02:0,9,115	0/0:5,0:5:13.59:0,14,155	0/0:1,0:1:3.01:0,3,44	./.	1/1:0,5:4:3.01:56,3,0	0/0:36,0:26:62.82:0,63,892	1/1:1,0:2:6.02:101,6,0	0/0:4,0:4:6.02:0,6,88	0/0:4,0:4:9.03:0,9,119	0/0:1,0:1:3.01:0,3,44	0/0:4,0:4:9.03:0,9,131	0/0:3,0:3:9.03:0,9,125	1/1:1,0:1:3.01:45,3,0	1/1:1,0:1:3.01:46,3,0	0/1:6,0:6:34.58:168,0,35	0/0:11,0:11:9.01:0,9,113	1/1:8,0:4:6.01:67,6,0	./.	0/0:2,0:2:3.01:0,3,44	./.	./.	0/0:2,0:2:6.02:0,6,88	./.	0/0:5,0:5:12.04:0,12,176	0/0:1,0:1:1.55:0,2,4	0/0:2,0:2:6.02:0,6,88
chr10	6550775	.	CAATA	C	115.51	PASS	AC=10;AF=0.556;AN=18;BaseQRankSum=0.103;DP=158;FS=0.000;HRun=0;HaplotypeScore=19.6316;MQ=16.44;MQ0=116;MQRankSum=0.103;QD=2.63;ReadPosRankSum=1.453;VQSLOD=0.8833;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	0/0:6,0:4:3.01:0,3,40	1/1:4,5:2:2.98:46,3,0	./.	./.	./.	./.	0/0:8,0:5:3.01:0,3,52	./.	./.	0/0:3,0:2:6.02:0,6,140	./.	./.	./.	./.	./.	1/1:5,0:8:2.89:21,3,0	./.	./.	0/0:3,0:2:3.01:0,3,70	./.	1/1:11,1:7:3.01:45,3,0	./.	1/1:3,2:2:3.01:46,3,0	1/1:7,3:5:3.01:46,3,0
chr10	6551872	.	GA	G	7393.20	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=8.713;DP=632;FS=1.382;HRun=2;HaplotypeScore=69.0593;InbreedingCoeff=0.9993;MQ=78.05;MQ0=0;MQRankSum=-1.855;QD=32.57;ReadPosRankSum=1.106;VQSLOD=4.7913;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,105,1425	1/1:0,12:12:33.04:404,33,0	0/0:19,0:19:53.99:0,54,706	0/0:22,0:22:58.39:0,58,748	1/1:1,20:21:51.17:656,51,0	0/0:19,0:19:56.98:0,57,788	0/0:22,0:22:66.13:0,66,852	1/1:1,37:38:99:1219,111,0	0/0:27,0:27:78.25:0,78,1105	1/1:0,24:24:72.20:897,72,0	1/1:1,15:16:36.12:462,36,0	0/0:23,0:23:66.21:0,66,932	0/0:19,0:19:57.19:0,57,815	0/0:26,0:26:78.25:0,78,1098	0/0:25,0:25:75.12:0,75,1018	0/0:25,0:25:72.17:0,72,976	0/0:26,0:26:75.21:0,75,1031	1/1:0,20:20:51.17:660,51,0	0/0:15,0:15:45:0,45,572	0/0:18,0:18:51.16:0,51,722	1/1:1,38:39:84.27:1084,84,0	0/0:15,0:15:42.14:0,42,601	0/0:13,0:13:39.13:0,39,559	0/0:31,0:31:93.25:0,93,1264	0/0:22,0:22:66.21:0,66,924	1/1:0,27:27:81.22:1004,81,0	1/1:0,20:20:57.19:736,57,0	1/1:0,10:10:21.07:271,21,0
chr10	6552154	.	ACGCGCGCGCGCGCGCGCG	A	3847.95	PASS	AB=0.736;AC=19;AF=0.396;AN=48;BaseQRankSum=-0.385;DP=469;FS=5.209;HRun=0;HaplotypeScore=231.2968;InbreedingCoeff=-0.1207;MQ=36.37;MQ0=9;MQRankSum=-4.671;QD=13.22;ReadPosRankSum=1.122;VQSLOD=1.9556;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/1:2,4:6:10.74:156,0,11	./.	0/0:4,0:1:2.50:0,2,9	0/0:13,9:22:4.31:0,4,18	0/0:12,0:19:2.91:0,3,17	0/1:12,0:26:26.54:27,0,543	1/1:16,3:14:7.28:327,7,0	0/1:13,0:20:93.92:94,0,272	1/1:14,4:19:18.06:747,18,0	./.	0/0:11,5:18:3.85:0,4,22	0/1:9,3:15:2.67:359,0,3	0/1:11,5:20:7.10:303,0,7	0/1:13,0:22:23.60:24,0,398	0/0:8,0:17:12.04:0,12,326	0/1:18,0:26:24.14:24,0,609	1/1:11,6:18:8.04:454,8,0	0/1:13,0:13:54.10:54,0,293	0/0:4,0:6:8.98:0,9,180	1/1:14,1:15:3.01:133,3,0	./.	0/0:11,5:21:5.92:0,6,40	0/0:12,5:17:2.50:0,2,9	0/1:11,0:17:37.79:38,0,148	0/1:18,5:24:99:968,0,132	0/1:14,1:14:71.40:142,0,71	0/0:5,0:3:3.01:0,3,61
chr10	6552529	.	A	ATTTG	7152.75	PASS	AB=0.944;AC=13;AF=0.232;AN=56;BaseQRankSum=7.566;DP=643;FS=0.417;HRun=0;HaplotypeScore=103.6599;InbreedingCoeff=0.8986;MQ=73.29;MQ0=3;MQRankSum=-0.785;QD=42.32;ReadPosRankSum=-0.695;VQSLOD=4.5394;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,26:35:66.21:1542,66,0	0/0:9,0:9:24.07:0,24,367	0/0:36,0:28:27.04:0,27,407	0/0:32,0:26:26.87:0,27,372	0/0:28,0:28:75.24:0,75,1198	0/0:28,0:28:60.20:0,60,971	0/0:17,0:17:42.14:0,42,678	0/0:25,0:25:51.17:0,51,805	0/0:19,0:19:39.12:0,39,607	0/0:22,0:22:33.09:0,33,492	0/0:21,0:21:45.15:0,45,717	1/1:3,20:23:51.18:1242,51,0	1/1:4,18:22:39.13:949,39,0	1/1:7,16:24:42.14:1006,42,0	0/0:19,0:19:45.14:0,45,708	0/0:22,0:22:54.17:0,54,858	0/0:31,0:31:60.18:0,60,951	0/1:16,1:17:39.91:40,0,444	0/0:22,0:22:30.09:0,30,455	0/0:15,0:15:30.10:0,30,485	0/0:30,0:30:57.17:0,57,879	0/0:19,0:19:36.12:0,36,585	1/1:5,16:21:48.16:1132,48,0	1/1:5,22:27:51.18:1242,51,0	0/0:20,0:20:48.11:0,48,732	0/0:16,0:16:39.12:0,39,578	0/0:32,0:31:60.19:0,60,931	0/0:10,0:10:27.09:0,27,431
chr10	6553970	.	T	TTCC	2185.53	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-4.774;DP=574;FS=10.006;HRun=0;HaplotypeScore=82.1641;InbreedingCoeff=0.9826;MQ=61.70;MQ0=3;MQRankSum=1.073;QD=27.32;ReadPosRankSum=1.541;VQSLOD=3.3973;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:75.23:0,75,1047	0/0:7,0:7:18.06:0,18,262	0/0:30,0:19:33.10:0,33,453	0/0:28,0:17:28.10:0,28,330	0/0:22,0:22:60.20:0,60,871	0/0:12,0:12:18.06:0,18,262	0/0:24,0:24:32.28:0,32,739	0/0:34,0:34:51.16:0,51,717	0/0:11,0:11:21.03:0,21,262	0/0:23,0:23:45.15:0,45,655	0/0:16,0:16:33.09:0,33,460	1/1:8,5:12:12.04:217,12,0	1/1:6,15:21:26.93:554,27,0	1/1:3,8:11:21.07:431,21,0	0/0:26,0:26:34.33:0,34,592	0/0:17,0:17:36.12:0,36,524	0/0:35,0:35:75.23:0,75,1059	0/0:11,0:10:18.06:0,18,258	0/0:24,0:24:45.14:0,45,622	0/0:19,0:19:39.13:0,39,583	0/0:33,0:33:75.12:0,75,1090	0/0:14,0:14:24.08:0,24,349	1/1:2,10:12:24.08:493,24,0	1/1:9,14:23:33.11:663,33,0	0/0:15,0:15:33.11:0,33,480	0/0:17,0:17:42.14:0,42,602	0/0:28,0:27:60.14:0,60,825	0/0:13,0:13:21.07:0,21,302
chr10	6554011	.	C	CT	768.98	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=0.521;DP=813;FS=2.438;HRun=2;HaplotypeScore=118.8895;InbreedingCoeff=0.6088;MQ=43.72;MQ0=50;MQRankSum=-2.041;QD=16.72;ReadPosRankSum=-2.072;VQSLOD=3.1821;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:10,23:31:20.52:859,21,0	0/0:11,0:11:24.05:0,24,281	0/0:163,0:21:32.33:0,32,617	0/0:127,0:19:45.61:0,46,568	0/0:30,0:30:74.66:0,75,890	0/0:11,0:11:20.89:0,21,232	0/0:21,0:20:45.04:0,45,555	0/0:23,0:20:57.18:0,57,729	0/0:15,0:15:30:0,30,351	0/0:20,0:20:54.16:0,54,661	0/0:23,0:23:45.13:0,45,567	0/0:15,0:14:21.07:0,21,273	0/0:15,0:15:45.07:0,45,536	0/0:17,0:17:38.81:0,39,386	0/0:23,0:23:45.14:0,45,580	0/0:15,0:15:39.10:0,39,489	0/0:36,0:36:70.99:0,71,950	0/0:21,0:20:44.69:0,45,557	0/0:11,0:10:5.11:0,5,246	0/0:24,0:23:55.46:0,55,668	0/0:27,0:27:60.17:0,60,747	0/0:16,0:16:32.94:0,33,348	0/0:17,0:17:51.15:0,51,633	0/0:28,0:28:72.97:0,73,839	0/0:17,0:17:32.31:0,32,378	0/0:18,0:18:49.56:0,50,595	0/0:23,0:19:41.92:0,42,561	0/1:13,0:13:9.21:9,0,139
chr10	6554042	.	C	CTCTCTT	6260.17	PASS	AB=1.000;AC=25;AF=0.446;AN=56;BaseQRankSum=-4.709;DP=729;FS=7.131;HRun=0;HaplotypeScore=130.3983;InbreedingCoeff=0.6196;MQ=50.95;MQ0=38;MQRankSum=-4.898;QD=19.56;ReadPosRankSum=1.457;VQSLOD=4.0969;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:22:18.76:19,0,96	0/0:9,0:9:24.08:0,24,542	0/0:104,0:17:20.25:0,20,174	0/0:90,0:19:24.46:0,24,203	0/1:27,0:27:89.80:134,0,90	1/1:5,10:18:12:210,12,0	1/1:4,14:18:12.04:410,12,0	0/0:30,0:25:59.80:0,60,505	1/1:0,14:14:15.05:519,15,0	0/0:19,0:19:50.90:0,51,360	0/0:20,0:19:32.15:0,32,290	0/0:16,0:15:32.91:0,33,628	0/0:18,0:18:47.29:0,47,483	0/0:17,0:17:36.99:0,37,455	1/1:2,19:23:27.09:883,27,0	1/1:2,9:13:17.97:536,18,0	1/1:4,27:33:12:319,12,0	0/0:23,0:22:27.71:0,28,302	1/1:16,0:15:38.84:487,39,0	1/1:8,19:27:45.50:874,45,0	0/0:18,0:17:26.41:0,26,143	1/1:1,12:15:23.95:578,24,0	0/0:18,0:18:48.01:0,48,623	0/0:27,0:27:66.15:0,66,905	1/1:5,19:24:18.05:512,18,0	0/1:21,0:21:99:345,0,144	0/1:20,0:17:55.30:276,0,55	0/1:20,0:17:99:158,0,109
chr10	6554082	.	TTTTTTC	T	471.05	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.875;DP=505;FS=4.497;HRun=0;HaplotypeScore=115.1916;InbreedingCoeff=0.8480;MQ=68.88;MQ0=9;MQRankSum=-3.902;QD=21.41;ReadPosRankSum=-0.093;VQSLOD=3.1361;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:14,8:20:44.81:566,45,0	0/0:6,0:6:15.04:0,15,334	0/0:26,0:17:21.76:0,22,438	0/0:31,0:15:17.36:0,17,155	0/0:18,0:18:42.14:0,42,1223	0/0:12,0:11:14.97:0,15,356	0/0:13,0:12:18.06:0,18,529	0/0:29,0:26:51:0,51,1235	0/0:8,0:8:6.01:0,6,139	0/0:20,0:19:51.12:0,51,1282	0/0:12,0:12:29.76:0,30,750	0/0:9,0:9:15.95:0,16,460	0/0:17,0:17:34.15:0,34,1041	0/0:15,0:15:45.09:0,45,969	0/0:18,0:18:27.09:0,27,760	0/0:16,0:16:33.03:0,33,854	0/0:29,0:28:26.53:0,27,623	0/0:17,0:17:30.01:0,30,736	0/0:17,0:15:30.06:0,30,768	0/0:21,0:20:48.07:0,48,1227	0/0:12,0:12:30.07:0,30,806	0/0:15,0:15:33.11:0,33,866	0/0:23,0:23:57.16:0,57,1634	0/0:25,0:25:48.90:0,49,1492	0/0:19,0:19:24.39:0,24,540	0/0:17,0:17:39.12:0,39,1057	0/0:27,0:26:59.64:0,60,1544	0/0:11,0:10:30.06:0,30,828
chr10	6554820	.	G	GCACA	13664.49	PASS	AB=0.707;AC=48;AF=0.857;AN=56;BaseQRankSum=-2.275;DP=874;FS=0.000;HRun=0;HaplotypeScore=185.9928;InbreedingCoeff=0.3319;MQ=52.90;MQ0=18;MQRankSum=0.921;QD=18.47;ReadPosRankSum=1.879;VQSLOD=3.9897;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:26,11:42:8.76:158,9,0	1/1:2,1:8:9.03:196,9,0	0/0:63,0:19:8.93:0,9,137	0/0:70,0:36:8.96:0,9,278	0/1:14,1:20:39.77:87,0,40	0/1:14,11:27:24.56:484,0,25	0/1:27,12:41:1.96:635,0,2	1/1:26,0:29:24.50:338,25,0	1/1:14,15:31:41.61:896,42,0	1/1:18,0:25:26.76:421,27,0	1/1:6,3:17:6.02:146,6,0	1/1:11,2:34:35.56:551,36,0	1/1:17,3:40:48.16:885,48,0	1/1:13,3:33:30.03:584,30,0	1/1:13,23:44:28.27:1415,28,0	1/1:12,15:31:47.63:1022,48,0	0/1:11,15:30:62.43:757,0,62	1/1:6,6:12:17.65:317,18,0	1/1:12,4:16:18.06:415,18,0	1/1:9,5:17:20.80:370,21,0	1/1:31,25:66:27.36:483,27,0	1/1:6,11:20:24.70:523,25,0	1/1:14,1:22:3.01:53,3,0	1/1:16,2:29:14.98:224,15,0	1/1:12,12:26:32.85:739,33,0	1/1:18,2:35:51.10:843,51,0	1/1:12,1:31:50.86:808,51,0	1/1:5,2:12:17.80:315,18,0
chr10	6555106	.	TGGA	T	3121.62	PASS	AB=1.000;AC=37;AF=0.661;AN=56;BaseQRankSum=2.291;DP=543;FS=15.720;HRun=0;HaplotypeScore=117.8487;InbreedingCoeff=0.6557;MQ=80.93;MQ0=0;MQRankSum=-3.012;QD=7.71;ReadPosRankSum=3.674;VQSLOD=2.1583;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:90.27:0,90,1320	1/1:18,0:18:25.13:113,25,0	0/0:21,0:21:43.47:0,43,832	0/0:19,0:18:47.63:0,48,688	1/1:22,1:23:47.96:265,48,0	1/1:19,0:19:41.86:189,42,0	1/1:35,0:35:26.47:269,26,0	1/1:18,0:18:2.55:122,3,0	1/1:21,1:22:36.59:203,37,0	1/1:21,0:21:51.74:347,52,0	1/1:17,1:18:39.38:215,39,0	0/0:21,0:21:3.63:0,4,223	0/0:8,0:8:3.01:0,3,34	0/1:21,0:21:99:116,0,140	1/1:26,1:27:39.38:215,39,0	1/1:23,0:23:36.37:164,36,0	1/1:31,0:31:55.80:251,56,0	1/1:5,0:5:11.19:51,11,0	1/1:11,0:11:22.32:110,22,0	1/1:20,1:21:37.09:224,37,0	1/1:25,0:25:30.72:139,31,0	1/1:22,0:22:21.91:99,22,0	0/1:16,0:16:14.76:15,0,54	0/0:17,0:17:13.51:0,14,196	1/1:14,0:14:27.93:126,28,0	0/1:15,0:15:2.33:80,0,2	0/0:12,0:12:4.92:0,5,14	0/0:6,0:6:5.19:0,5,14
chr10	6555107	.	GGA	G	10039.41	PASS	AB=0.984;AC=44;AF=0.786;AN=56;BaseQRankSum=-8.419;DP=504;FS=28.688;HRun=0;HaplotypeScore=80.8142;InbreedingCoeff=0.5010;MQ=81.67;MQ0=0;MQRankSum=-5.008;QD=23.57;ReadPosRankSum=2.524;VQSLOD=3.2922;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:90.18:0,90,940	1/1:0,18:18:27.09:412,27,0	0/0:20,0:20:43.34:0,43,679	0/0:19,0:18:48.84:0,49,581	1/1:2,21:23:51.07:703,51,0	1/1:2,17:19:45.15:686,45,0	1/1:3,32:35:43.59:1111,44,0	1/1:18,0:18:41.62:244,42,0	1/1:2,17:19:42.09:595,42,0	1/1:4,16:20:54.06:654,54,0	1/1:3,14:17:42.13:620,42,0	0/1:17,0:17:41.13:41,0,82	0/0:5,0:5:1.66:0,2,16	0/1:16,0:16:47.23:134,0,47	1/1:1,23:24:42.13:621,42,0	1/1:3,19:22:38.74:595,39,0	1/1:1,27:28:60.20:915,60,0	1/1:0,4:4:12.04:183,12,0	1/1:2,9:11:27.03:361,27,0	1/1:2,18:20:38.99:496,39,0	1/1:1,21:22:33.11:504,33,0	1/1:1,17:18:24.08:360,24,0	0/1:15,0:15:13.75:49,0,14	0/1:14,1:15:59.92:67,0,60	1/1:1,12:13:30.10:457,30,0	1/1:13,0:13:24.96:148,25,0	1/1:12,0:12:10.41:54,10,0	1/1:7,0:7:7.79:29,8,0
chr10	6555108	.	GA	G	6212.16	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-1.380;DP=497;FS=18.974;HRun=1;HaplotypeScore=87.2310;InbreedingCoeff=0.7644;MQ=81.30;MQ0=0;MQRankSum=-5.628;QD=14.62;ReadPosRankSum=1.111;VQSLOD=3.2071;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:88.41:0,88,564	1/1:18,0:18:26.62:190,27,0	0/0:19,0:19:41.32:0,41,564	0/0:19,0:18:48.71:0,49,460	1/1:22,0:22:50.53:352,51,0	1/1:17,2:19:44.64:317,45,0	1/1:33,2:35:42.08:495,42,0	1/1:1,17:18:44.78:504,45,0	1/1:18,1:19:41.63:293,42,0	1/1:16,4:20:53.69:404,54,0	1/1:15,1:16:41.64:294,42,0	1/1:16,1:17:6.95:152,7,0	1/1:5,0:5:2.91:26,3,0	1/1:16,0:16:1.60:149,2,0	1/1:25,0:25:41.64:295,42,0	1/1:19,1:20:38.30:275,38,0	1/1:27,0:27:59.52:422,60,0	1/1:4,0:4:11.90:85,12,0	1/1:9,2:11:26.42:193,26,0	1/1:19,1:20:38.64:269,39,0	1/1:21,0:21:32.74:233,33,0	1/1:17,1:18:23.71:163,24,0	1/1:14,1:15:2.63:105,3,0	1/1:15,1:16:16.89:200,17,0	1/1:12,1:13:29.76:211,30,0	1/1:0,12:12:27.03:308,27,0	1/1:0,11:11:11.61:150,12,0	1/1:0,7:7:9.03:125,9,0
chr10	6555109	.	A	AG	840.53	PASS	AB=1.000;AC=8;AF=0.143;AN=56;BaseQRankSum=-8.102;DP=524;FS=3.330;HRun=9;HaplotypeScore=116.1221;InbreedingCoeff=0.3218;MQ=80.76;MQ0=0;MQRankSum=-0.719;QD=8.41;ReadPosRankSum=-1.133;VQSLOD=1.9078;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,33:36:81.22:896,81,0	0/0:19,0:19:16.35:0,16,47	0/0:18,0:19:16.31:0,16,240	0/0:19,1:19:24.49:0,24,232	0/0:23,0:23:27.86:0,28,81	0/0:19,0:19:27.25:0,27,78	0/0:36,0:36:48.15:0,48,154	0/0:19,0:19:13.67:0,14,36	0/0:20,0:20:24.01:0,24,69	0/0:22,0:21:19.70:0,20,56	0/0:18,0:18:25.57:0,26,73	0/1:17,0:17:34.48:34,0,38	1/1:7,0:7:0.81:2,1,0	0/0:16,0:16:13.92:0,14,83	0/0:27,0:27:25.81:0,26,75	0/0:20,0:20:23.62:0,24,68	0/0:29,0:29:36.32:0,36,104	0/0:4,0:4:7.27:0,7,21	0/1:11,0:11:4.03:4,0,21	0/0:20,0:20:17.57:0,18,50	0/0:25,0:25:21.78:0,22,63	0/0:20,0:20:14.73:0,15,42	0/0:15,0:15:3.64:0,4,24	0/1:18,0:18:9.16:9,0,38	0/0:14,0:14:18.17:0,18,52	0/0:12,0:12:7.76:0,8,20	0/1:11,0:11:4.57:18,0,5	0/0:7,0:7:4.66:0,5,12
chr10	6557307	.	GT	G	13211.91	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-3.954;DP=669;FS=14.384;HRun=10;HaplotypeScore=67.6372;InbreedingCoeff=0.8423;MQ=72.43;MQ0=0;MQRankSum=-4.974;QD=20.55;ReadPosRankSum=4.258;VQSLOD=4.5806;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,37:39:92.98:807,93,0	1/1:0,9:9:24:208,24,0	0/0:13,1:14:1.18:0,1,200	0/0:12,0:11:15.03:0,15,156	1/1:3,26:29:74.96:650,75,0	1/1:5,27:32:80.98:703,81,0	1/1:2,22:24:56.99:495,57,0	1/1:7,24:31:71.92:618,72,0	1/1:4,18:22:47.98:417,48,0	1/1:7,26:33:77.97:677,78,0	1/1:4,25:29:11.95:506,12,0	1/1:4,21:25:50.99:443,51,0	1/1:2,25:27:65.98:573,66,0	1/1:5,15:20:41.99:365,42,0	1/1:3,19:22:47.99:417,48,0	1/1:1,27:28:59.99:521,60,0	1/1:1,20:21:50.99:443,51,0	1/1:2,8:10:23.95:201,24,0	1/1:2,15:17:47.64:395,48,0	1/1:3,29:32:80.96:702,81,0	1/1:3,27:30:71.98:625,72,0	1/1:1,18:19:47.99:417,48,0	1/1:1,23:25:56.02:475,56,0	1/1:5,17:22:47.98:417,48,0	1/1:0,20:20:53.99:469,54,0	1/1:1,18:19:53.98:466,54,0	1/1:2,43:46:99:944,110,0	1/1:0,12:12:29.99:260,30,0
chr10	6559901	.	CAGTG	C	23803.07	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-1.334;DP=710;FS=1.370;HRun=0;HaplotypeScore=136.7013;InbreedingCoeff=0.9973;MQ=86.99;MQ0=0;MQRankSum=-8.383;QD=48.48;ReadPosRankSum=2.995;VQSLOD=5.8987;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:33:99:0,99,2645	1/1:1,14:15:33.11:625,33,0	0/0:27,0:27:71.94:0,72,1708	0/0:26,0:26:69.24:0,69,1757	1/1:1,27:28:81.28:1537,81,0	1/1:0,15:15:36.12:683,36,0	1/1:2,30:32:78.27:1476,78,0	1/1:0,33:33:96.30:1742,96,0	1/1:3,25:28:69.19:1273,69,0	1/1:1,32:33:96.33:1822,96,0	1/1:1,21:22:60.12:1099,60,0	0/0:26,0:26:75.24:0,75,1954	0/0:26,0:26:72.25:0,72,1926	0/0:23,0:23:69.22:0,69,1795	1/1:3,37:40:96.29:1785,96,0	1/1:0,20:20:51.14:932,51,0	1/1:2,20:22:51.17:968,51,0	1/1:2,18:20:51.17:968,51,0	1/1:3,23:26:66.22:1222,66,0	1/1:1,27:28:72.25:1366,72,0	1/1:2,23:25:54.10:951,54,0	1/1:0,19:19:51.17:968,51,0	0/0:28,0:28:81.28:0,81,2157	0/0:29,0:29:87.30:0,87,2346	1/1:1,23:24:63.22:1196,63,0	1/1:1,26:27:78.27:1481,78,0	1/1:4,25:29:75.73:1424,76,0	1/1:0,5:5:15.05:285,15,0
chr10	6561064	.	ATT	A	18455.93	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=4.602;DP=615;FS=16.391;HRun=7;HaplotypeScore=95.7585;InbreedingCoeff=0.9831;MQ=71.31;MQ0=1;MQRankSum=-3.115;QD=32.90;ReadPosRankSum=1.728;VQSLOD=3.5943;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,99,1710	1/1:1,7:8:21.07:268,21,0	0/0:8,0:8:18.03:0,18,260	0/0:11,0:11:30.06:0,30,441	1/1:3,24:27:69.19:862,69,0	1/1:1,21:22:57.18:726,57,0	1/1:1,22:23:60.19:765,60,0	1/1:4,31:35:93.27:1170,93,0	1/1:1,26:27:75.24:956,75,0	1/1:0,22:22:66.21:839,66,0	1/1:1,15:16:45.10:555,45,0	1/1:1,23:24:60.15:746,60,0	1/1:1,26:26:69.19:862,69,0	1/1:3,21:24:54.17:688,54,0	1/1:3,18:21:48.15:612,48,0	1/1:0,22:22:66.21:841,66,0	1/1:1,8:9:21.06:268,21,0	1/1:0,16:16:45.14:574,45,0	1/1:2,20:22:60.15:744,60,0	1/1:2,24:26:66.14:806,66,0	1/1:2,20:22:54.17:688,54,0	1/1:3,30:33:81.21:1014,81,0	1/1:4,26:30:75.23:956,75,0	1/1:3,16:19:39.12:497,39,0	1/1:2,21:23:63.20:803,63,0	1/1:1,27:28:81.26:1032,81,0	1/1:2,27:29:81.26:1032,81,0	1/1:1,5:6:12.04:153,12,0
chr10	6561234	.	TCTCTGCCCCTCTGCCC	T	23972.99	PASS	AB=0.704;AC=49;AF=0.875;AN=56;BaseQRankSum=2.149;DP=509;FS=0.000;HRun=0;HaplotypeScore=221.6756;InbreedingCoeff=0.8804;MQ=70.73;MQ0=0;MQRankSum=-5.023;QD=54.48;ReadPosRankSum=6.252;VQSLOD=4.0817;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:24:29.92:0,30,431	1/1:4,4:8:18.01:687,18,0	0/0:23,0:21:36.11:0,36,1764	0/0:22,0:20:22.27:0,22,680	1/1:5,18:23:12.04:534,12,0	1/1:6,11:17:24.08:1068,24,0	1/1:1,14:15:24.08:1055,24,0	1/1:19,0:19:17.85:126,18,0	1/1:8,14:22:27.09:1202,27,0	1/1:11,8:19:21.07:849,21,0	1/1:2,13:15:24.08:1067,24,0	1/1:4,18:22:45.15:2001,45,0	1/1:3,11:14:15.05:667,15,0	1/1:2,18:20:42.14:1870,42,0	1/1:5,16:21:27.09:1201,27,0	1/1:7,22:29:39.13:1736,39,0	1/1:6,12:18:12.04:534,12,0	1/1:4,10:14:12.04:461,12,0	1/1:10,9:19:27:866,27,0	1/1:4,13:17:24.08:1068,24,0	0/1:11,8:19:0:0,0,0	1/1:0,11:11:15.05:666,15,0	1/1:4,18:22:27.09:1202,27,0	1/1:3,7:10:9.03:401,9,0	1/1:12,8:20:26.96:958,27,0	1/1:8,9:17:24.08:908,24,0	1/1:3,18:21:45.15:1911,45,0	1/1:0,8:8:21.07:935,21,0
chr10	6561987	.	T	TA	5101.39	PASS	AB=0.760;AC=41;AF=0.732;AN=56;BaseQRankSum=-0.292;DP=597;FS=4.323;HRun=13;HaplotypeScore=78.3699;InbreedingCoeff=0.4992;MQ=76.01;MQ0=3;MQRankSum=-0.214;QD=9.83;ReadPosRankSum=-0.209;VQSLOD=4.2907;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,25:30:10.91:376,11,0	1/1:1,11:12:24.03:223,24,0	0/1:23,0:22:8.33:8,0,73	0/0:13,0:11:8.06:0,8,63	0/1:7,9:16:43.05:172,0,43	1/1:4,1:20:28.72:167,29,0	1/1:4,0:18:5.15:95,5,0	1/1:16,26:43:78.10:687,78,0	1/1:2,2:17:25.73:143,26,0	1/1:15,12:28:27.27:219,27,0	0/1:12,14:27:8.33:196,0,8	0/0:16,0:16:34.72:0,35,232	0/0:14,0:14:26.66:0,27,182	0/1:14,1:15:7.17:7,0,101	1/1:5,1:21:37.56:201,38,0	1/1:3,1:20:31.28:162,31,0	1/1:1,2:24:34.41:199,34,0	1/1:5,17:22:44.99:406,45,0	1/1:5,2:16:34.86:235,35,0	1/1:5,0:24:46.90:254,47,0	1/1:6,14:20:0.44:147,0,0	1/1:3,0:27:43.77:226,44,0	0/0:25,0:25:47.47:0,47,329	0/0:10,0:10:20.82:0,21,144	0/1:5,1:18:0.47:68,0,0	1/1:13,20:33:16.56:429,17,0	1/1:8,20:27:6.90:349,7,0	1/1:2,9:12:0.28:133,0,0
chr10	6562490	.	CA	C	16801.05	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=9.362;DP=741;FS=14.768;HRun=4;HaplotypeScore=75.8939;InbreedingCoeff=0.9999;MQ=91.91;MQ0=0;MQRankSum=-5.675;QD=33.01;ReadPosRankSum=4.358;VQSLOD=3.9771;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:59,0:59:99:0,177,2399	1/1:0,12:12:33.10:396,33,0	0/0:25,0:25:66.22:0,66,904	0/0:37,0:37:99:0,102,1328	1/1:1,23:24:69.21:826,69,0	1/1:0,20:20:60.18:720,60,0	1/1:1,17:18:45.14:540,45,0	1/1:2,31:33:93.27:1105,93,0	1/1:0,30:30:81.25:972,81,0	1/1:3,27:30:75.23:900,75,0	1/1:1,16:17:45.14:540,45,0	0/0:25,0:25:75.25:0,75,1049	0/0:28,0:28:78.24:0,78,1072	0/0:23,0:23:66.18:0,66,873	1/1:1,37:38:99:1332,111,0	1/1:0,37:37:99:1224,102,0	1/1:0,23:23:66.20:792,66,0	1/1:3,15:18:42.13:504,42,0	1/1:0,27:27:81.22:939,81,0	1/1:3,23:26:69.21:828,69,0	1/1:0,26:26:72.22:864,72,0	1/1:2,32:34:96.29:1151,96,0	0/0:17,0:17:48.16:0,48,672	0/0:18,0:18:54.18:0,54,756	1/1:1,24:25:66.20:792,66,0	1/1:1,20:21:60.18:720,60,0	1/1:2,31:33:87.27:1044,87,0	1/1:0,17:17:51.16:612,51,0
chr10	6563117	.	A	AG	28897.83	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=5.241;DP=795;FS=26.415;HRun=0;HaplotypeScore=136.9821;InbreedingCoeff=0.9996;MQ=78.29;MQ0=0;MQRankSum=-8.626;QD=41.05;ReadPosRankSum=4.935;VQSLOD=2.5583;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,114,1549	1/1:1,12:13:36.12:541,36,0	0/0:24,0:23:63.08:0,63,778	0/0:25,0:26:60.20:0,60,821	1/1:0,30:30:84.28:1243,84,0	1/1:0,25:25:69.23:1025,69,0	1/1:0,24:24:60.20:891,60,0	1/1:0,32:33:96.26:1352,96,0	1/1:0,29:29:84.28:1255,84,0	1/1:2,32:34:99:1410,99,0	1/1:0,20:20:54.18:805,54,0	1/1:1,29:30:78.26:1151,78,0	1/1:0,50:50:99:2096,141,0	1/1:0,28:28:81.27:1205,81,0	1/1:0,40:40:99:1549,105,0	1/1:0,28:28:78.26:1160,78,0	1/1:0,29:29:75.25:1117,75,0	1/1:0,25:25:69.23:1020,69,0	1/1:0,21:22:63.15:874,63,0	1/1:0,29:29:84.28:1256,84,0	1/1:0,40:40:99:1656,111,0	1/1:0,34:34:96.32:1438,96,0	1/1:0,23:23:66.18:966,66,0	1/1:0,29:29:75.25:1119,75,0	1/1:0,31:31:90.30:1321,90,0	1/1:1,27:28:81.23:1151,81,0	1/1:0,20:20:60.20:896,60,0	1/1:1,9:10:27.09:402,27,0
chr10	6563412	.	CAGAGAGAGAGAGAGAGAGAGAG	C	14249.38	PASS	AB=0.711;AC=31;AF=0.554;AN=56;BaseQRankSum=4.479;DP=596;FS=16.493;HRun=0;HaplotypeScore=352.5481;InbreedingCoeff=0.2747;MQ=66.02;MQ0=6;MQRankSum=-6.922;QD=34.42;ReadPosRankSum=2.531;VQSLOD=2.1922;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:27:4.38:676,0,4	1/1:8,0:14:8.93:171,9,0	0/0:24,0:17:6.02:0,6,370	0/0:36,0:17:6.96:0,7,165	0/1:8,0:16:69.64:137,0,70	1/1:7,10:17:24.08:1335,24,0	1/1:13,3:17:9.03:404,9,0	0/0:10,0:18:25.15:0,25,246	1/1:10,14:24:33.11:1842,33,0	0/1:14,0:25:99:501,0,421	0/1:6,0:18:24.30:420,0,24	0/0:13,0:25:6.52:0,7,470	0/0:18,0:29:37.52:0,38,682	0/1:15,0:29:25.81:26,0,638	1/1:16,12:30:30.10:1608,30,0	1/1:17,10:27:21.07:1062,21,0	1/1:15,7:22:9.03:424,9,0	0/1:12,0:16:99:128,0,118	1/1:14,0:15:9.03:260,9,0	1/1:4,9:13:24.08:1181,24,0	0/0:20,0:22:15.05:0,15,200	1/1:6,8:14:21.07:929,21,0	0/0:12,0:24:15.16:0,15,214	0/1:12,0:22:16.20:16,0,128	1/1:9,15:25:36.12:2032,36,0	0/1:7,0:20:99:651,0,319	0/1:11,0:21:99:446,0,192	0/0:4,0:4:6.02:0,6,79
chr10	6563431	.	AGAGAGAGAGAGAGAGAGAG	A	12003.17	PASS	AB=0.984;AC=28;AF=0.500;AN=56;BaseQRankSum=13.728;DP=549;FS=6.707;HRun=0;HaplotypeScore=292.0223;InbreedingCoeff=-0.4238;MQ=47.36;MQ0=18;MQRankSum=-8.485;QD=28.24;ReadPosRankSum=11.040;VQSLOD=1.5676;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:11,10:21:8.69:814,0,9	0/1:11,0:11:80.52:232,0,81	0/0:30,0:11:27.06:0,27,875	0/0:37,0:9:19.25:0,19,725	0/1:15,0:15:95.20:208,0,95	0/1:14,0:14:36.41:903,0,36	0/1:13,0:13:99:254,0,158	0/1:13,0:12:20.83:21,0,237	1/1:19,0:19:33.11:1294,33,0	0/1:25,0:25:99:641,0,669	0/1:19,0:18:83.11:589,0,83	0/1:23,0:23:99:133,0,651	0/0:30,0:30:9.11:0,9,715	0/1:29,0:29:99:125,0,643	1/1:20,0:19:30.09:1157,30,0	0/1:17,0:17:46.35:686,0,46	0/1:17,0:17:79.69:257,0,80	0/1:17,0:17:99:161,0,386	0/1:7,0:6:93.44:126,0,93	0/1:11,0:11:32.54:766,0,33	0/0:27,0:26:25.95:0,26,343	1/1:12,0:12:21.04:579,21,0	0/1:23,0:23:27.20:27,0,456	0/1:24,0:24:99:102,0,406	1/1:24,0:23:36.12:1457,36,0	0/1:23,0:22:99:847,0,387	0/1:22,0:22:99:614,0,308	0/1:6,0:5:11.12:11,0,104
chr10	6565548	.	AGGAC	A	23726.11	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=13.232;DP=653;FS=12.188;HRun=0;HaplotypeScore=176.0452;InbreedingCoeff=0.9980;MQ=80.95;MQ0=0;MQRankSum=-17.782;QD=50.70;ReadPosRankSum=4.557;VQSLOD=5.3437;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,105,2946	1/1:0,13:13:36.12:754,36,0	0/0:27,0:27:81.28:0,81,2108	0/0:24,0:24:72.20:0,72,1945	1/1:0,34:34:69.15:1359,69,0	1/1:0,25:25:75.22:1529,75,0	1/1:0,18:18:42.10:829,42,0	0/0:31,0:31:93.31:0,93,2429	1/1:0,20:20:57.20:1194,57,0	1/1:0,29:29:84.29:1718,84,0	1/1:0,16:16:42.11:838,42,0	1/1:0,32:32:87.30:1813,87,0	1/1:0,29:30:81.23:1646,81,0	1/1:0,25:25:69.24:1445,69,0	1/1:0,31:31:81.28:1695,81,0	1/1:0,29:29:75.26:1571,75,0	1/1:0,13:13:30.10:628,30,0	1/1:0,12:12:30.10:629,30,0	1/1:0,12:12:33.11:692,33,0	1/1:0,27:27:69.06:1248,69,0	1/1:0,16:16:26.62:351,27,0	1/1:0,27:27:69.15:1360,69,0	1/1:0,15:15:36.08:711,36,0	1/1:0,15:15:18:334,18,0	1/1:0,29:29:66.23:1382,66,0	0/0:27,0:27:81.27:0,81,2236	0/0:20,0:20:60.18:0,60,1613	0/0:19,0:19:57.20:0,57,1647
chr10	6575117	.	T	TA	538.78	PASS	AB=0.980;AC=12;AF=0.667;AN=18;BaseQRankSum=-1.909;DP=127;FS=3.694;HRun=3;HaplotypeScore=34.3093;MQ=103.00;MQ0=9;MQRankSum=-0.943;QD=5.33;ReadPosRankSum=0.490;VQSLOD=0.5166;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	1/1:0,3:3:8.96:102,9,0	0/1:35,0:26:64.44:64,0,386	0/1:47,2:39:99:224,0,433	./.	./.	./.	0/0:9,0:8:9.03:0,9,108	./.	./.	1/1:1,1:1:3.01:42,3,0	./.	./.	./.	./.	./.	./.	./.	./.	1/1:1,5:4:9.03:125,9,0	./.	./.	1/1:1,2:2:5.93:59,6,0	./.	1/1:0,3:2:2.94:18,3,0	./.	./.	0/0:1,1:1:3.01:0,3,36
chr10	6577249	.	CA	C	253.53	PASS	AB=0.850;AC=8;AF=0.143;AN=56;BaseQRankSum=5.922;DP=453;FS=6.210;HRun=7;HaplotypeScore=44.7499;InbreedingCoeff=0.6560;MQ=52.13;MQ0=26;MQRankSum=-4.655;QD=5.51;ReadPosRankSum=-2.193;VQSLOD=-0.6958;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:23:45.11:0,45,549	0/0:11,0:10:21.07:0,21,264	0/1:11,1:6:12.55:13,0,171	0/0:16,0:11:27.08:0,27,327	0/0:33,1:30:78.25:0,78,981	0/0:19,1:19:30.10:0,30,377	0/0:12,0:12:36.07:0,36,435	1/1:12,5:5:15.03:153,15,0	0/0:16,0:15:27:0,27,304	0/0:22,0:21:57.14:0,57,699	0/0:14,0:14:36.12:0,36,453	0/0:15,0:12:18.02:0,18,209	0/0:29,0:27:51.12:0,51,622	0/0:19,0:18:39.12:0,39,490	0/0:24,0:23:45.06:0,45,530	0/0:17,0:17:21.02:0,21,247	0/0:26,0:25:57.15:0,57,700	0/0:18,0:18:36.11:0,36,453	0/0:16,0:16:45.14:0,45,565	0/0:11,0:10:30.10:0,30,377	0/0:18,0:18:38.82:0,39,490	0/0:14,0:13:39.12:0,39,485	0/0:8,0:7:21.07:0,21,264	0/0:10,0:9:24.07:0,24,290	0/0:13,0:12:30.10:0,30,377	0/1:5,2:6:28.72:52,0,29	1/1:7,1:7:12.02:119,12,0	1/1:2,0:2:6.01:59,6,0
chr10	6577255	.	A	ATCTC	320.98	PASS	AB=0.800;AC=5;AF=0.089;AN=56;BaseQRankSum=4.097;DP=438;FS=12.448;HRun=0;HaplotypeScore=64.7510;InbreedingCoeff=0.7005;MQ=56.22;MQ0=8;MQRankSum=-2.652;QD=29.18;ReadPosRankSum=-0.300;VQSLOD=1.7719;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:25:45.15:0,45,934	0/0:10,0:10:24.08:0,24,499	0/0:16,0:10:23.66:0,24,394	0/0:16,0:11:20.94:0,21,548	0/0:32,0:30:78.27:0,78,1612	0/0:19,0:19:33.11:0,33,687	0/0:14,0:14:39.13:0,39,774	0/0:6,0:6:17.52:0,18,127	0/0:13,0:13:27.09:0,27,558	0/0:22,0:21:60.21:0,60,1229	0/0:16,0:16:39.13:0,39,808	0/0:14,0:13:24.08:0,24,495	0/0:29,0:28:60.21:0,60,1207	0/0:20,0:19:39.13:0,39,817	0/0:22,0:22:45.15:0,45,942	0/0:16,0:16:24.04:0,24,460	0/0:27,0:26:63.20:0,63,1277	0/0:18,0:18:42.14:0,42,859	0/0:16,0:16:45.15:0,45,914	0/0:14,0:14:36.12:0,36,729	0/0:17,0:17:41.94:0,42,870	0/0:13,0:13:39.13:0,39,798	0/0:7,0:7:21.07:0,21,440	0/0:12,0:11:30.09:0,30,588	0/0:12,0:11:30.10:0,30,623	0/1:3,1:3:40.59:41,0,70	1/1:1,4:4:12.04:257,12,0	1/1:0,2:2:6.02:139,6,0
chr10	6577257	.	TC	T	51.21	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=3.687;DP=440;FS=7.381;HRun=1;HaplotypeScore=45.9919;InbreedingCoeff=0.8577;MQ=56.40;MQ0=6;MQRankSum=-3.730;QD=5.12;ReadPosRankSum=0.363;VQSLOD=0.1545;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:25:45.15:0,45,716	0/0:10,0:10:24.08:0,24,368	0/0:15,0:10:27.04:0,27,384	0/0:15,0:11:30.10:0,30,460	0/0:30,0:30:81.27:0,81,1272	0/0:20,0:20:33.11:0,33,513	0/0:14,0:14:39.13:0,39,598	0/0:6,0:6:16.07:0,16,91	0/0:13,0:13:27.09:0,27,428	0/0:22,0:21:60.20:0,60,948	0/0:16,0:16:42.14:0,42,653	0/0:15,0:14:24.08:0,24,359	0/0:29,0:28:60.20:0,60,920	0/0:20,0:19:39.13:0,39,620	0/0:22,0:22:45.15:0,45,716	0/0:15,0:15:24.08:0,24,371	0/0:27,0:26:63.21:0,63,993	0/0:18,0:18:42.14:0,42,656	0/0:17,0:17:48.16:0,48,751	0/0:14,0:14:39.13:0,39,597	0/0:17,0:17:41.84:0,42,657	0/0:15,0:15:42.13:0,42,647	0/0:7,0:7:21.07:0,21,335	0/0:11,0:10:30.10:0,30,473	0/0:12,0:12:33.11:0,33,523	0/0:3,1:3:8:0,8,66	1/1:3,4:6:8.51:98,9,0	1/1:1,2:3:6.01:56,6,0
chr10	6577399	.	T	TA	2293.75	PASS	AC=44;AF=0.917;AN=48;BaseQRankSum=-2.912;DP=186;FS=0.000;HRun=5;HaplotypeScore=18.3848;InbreedingCoeff=0.3852;MQ=54.08;MQ0=16;MQRankSum=-4.836;QD=14.80;ReadPosRankSum=2.656;VQSLOD=1.1893;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,4:4:9.03:118,9,0	1/1:0,8:2:6.02:79,6,0	0/0:10,0:7:21.04:0,21,217	0/0:8,0:3:5.75:0,6,44	1/1:3,12:6:9.03:112,9,0	1/1:2,4:4:12.04:158,12,0	1/1:0,1:1:3.01:39,3,0	1/1:14,0:1:2.97:20,3,0	1/1:1,1:2:3.01:39,3,0	./.	1/1:2,7:4:9.03:118,9,0	1/1:0,1:1:3.01:39,3,0	1/1:0,6:6:18.06:236,18,0	1/1:1,6:7:15.05:197,15,0	1/1:0,3:3:9.03:118,9,0	1/1:2,2:4:6.02:79,6,0	1/1:7,2:4:6.02:79,6,0	1/1:3,3:5:6.02:79,6,0	1/1:3,1:1:3.01:39,3,0	1/1:1,9:5:12.04:158,12,0	./.	./.	1/1:0,7:4:9.03:118,9,0	./.	1/1:1,13:9:24.03:290,24,0	1/1:4,3:2:5.98:59,6,0	1/1:1,3:3:6.02:79,6,0	1/1:7,5:4:12.04:156,12,0
chr10	6578170	.	T	TAAGC	11242.39	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-2.401;DP=492;FS=5.321;HRun=0;HaplotypeScore=50.4560;InbreedingCoeff=0.6007;MQ=39.28;MQ0=33;MQRankSum=2.809;QD=24.93;ReadPosRankSum=2.854;VQSLOD=4.0191;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,12:15:21.07:546,21,0	1/1:4,9:7:3.01:79,3,0	0/0:19,0:14:42.14:0,42,730	0/0:22,0:15:42.13:0,42,712	1/1:6,12:10:6.02:158,6,0	1/1:3,26:24:24.08:631,24,0	1/1:3,12:13:27.09:711,27,0	1/1:10,10:16:30.10:791,30,0	1/1:3,13:13:15.05:395,15,0	1/1:3,5:4:9.03:231,9,0	1/1:0,17:12:18.06:472,18,0	1/1:6,21:27:33.11:855,33,0	1/1:5,11:15:12.04:316,12,0	1/1:4,16:20:18.06:474,18,0	1/1:5,24:29:21.07:553,21,0	1/1:8,18:23:36.12:905,36,0	1/1:2,4:5:6.02:147,6,0	1/1:6,2:6:6.02:157,6,0	1/1:6,10:15:30.10:792,30,0	1/1:5,15:14:11.67:316,12,0	1/1:4,5:8:12.04:316,12,0	1/1:2,8:6:6.02:158,6,0	1/1:4,7:7:6.02:158,6,0	1/1:2,7:8:9.03:237,9,0	1/1:5,12:12:18.06:474,18,0	1/1:3,16:16:39.10:960,39,0	1/1:10,19:19:14.94:332,15,0	1/1:2,4:2:3.01:79,3,0
chr10	6578818	.	T	TA	3195.18	PASS	AB=0.726;AC=39;AF=0.696;AN=56;BaseQRankSum=-2.263;DP=445;FS=3.672;HRun=0;HaplotypeScore=89.0664;InbreedingCoeff=0.3326;MQ=57.99;MQ0=30;MQRankSum=-3.891;QD=9.77;ReadPosRankSum=-2.119;VQSLOD=2.8686;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:41:99:0,105,1233	1/1:2,9:10:11.61:222,12,0	0/0:29,0:9:0.39:0,0,57	0/0:10,0:8:20.95:0,21,197	1/1:3,9:9:6.44:74,6,0	1/1:2,14:13:23.97:225,24,0	1/1:3,13:12:21.04:204,21,0	0/1:25,0:27:4.99:5,0,81	1/1:2,6:6:0.33:77,0,0	1/1:7,8:12:20.24:222,20,0	1/1:5,6:11:9.32:110,9,0	0/1:4,8:12:9.05:106,0,9	0/1:2,10:11:0.55:198,0,1	1/1:4,10:12:26.80:235,27,0	1/1:3,11:14:26.93:242,27,0	1/1:3,11:10:15.01:143,15,0	1/1:3,12:15:17.22:184,17,0	1/1:3,7:8:13.55:143,14,0	0/1:4,9:12:22.98:194,0,23	1/1:2,11:11:16.05:165,16,0	1/1:4,7:9:6.31:103,6,0	1/1:1,5:6:6.01:59,6,0	0/1:4,8:10:4.62:95,0,5	0/1:4,1:4:17.83:18,0,20	1/1:3,20:19:16.51:312,17,0	0/1:2,2:18:32.46:32,0,68	0/0:1,0:24:11.25:0,11,81	0/0:2,0:7:9.49:0,9,33
chr10	6578819	.	TA	T	1177.57	PASS	AB=1.000;AC=10;AF=0.179;AN=56;BaseQRankSum=-7.096;DP=453;FS=5.764;HRun=10;HaplotypeScore=100.5008;InbreedingCoeff=0.6749;MQ=57.78;MQ0=28;MQRankSum=2.850;QD=7.96;ReadPosRankSum=5.206;VQSLOD=1.9277;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,39:41:99:872,102,0	0/0:11,0:10:28.60:0,29,152	0/0:28,0:9:10.09:0,10,68	0/1:10,0:8:15.70:16,0,37	0/0:14,0:10:8.62:0,9,47	0/0:17,0:14:28.80:0,29,164	0/0:16,0:12:19.79:0,20,98	0/1:21,0:27:35.45:35,0,214	0/0:9,0:7:11.52:0,12,68	0/0:15,0:12:22.76:0,23,115	0/0:11,0:11:17.30:0,17,96	0/0:12,0:12:20.30:0,20,130	0/0:13,0:12:21.85:0,22,145	0/0:14,0:12:23.23:0,23,116	0/0:14,0:14:28.64:0,29,160	0/0:16,0:11:17.20:0,17,97	0/0:17,0:16:28.75:0,29,160	0/0:10,0:8:14.20:0,14,72	0/0:12,0:12:12.18:0,12,152	0/0:12,0:11:18.39:0,18,92	0/0:9,0:9:14.74:0,15,73	0/0:6,0:6:8.65:0,9,48	0/0:14,0:12:19.90:0,20,108	0/0:5,0:4:11.93:0,12,104	0/0:22,0:19:39.25:0,39,216	1/1:18,0:18:12.27:175,12,0	1/1:25,0:24:34.33:181,34,0	1/1:9,0:7:11.50:61,12,0
chr10	6579274	.	GC	G	417.33	PASS	AB=0.802;AC=9;AF=0.180;AN=50;BaseQRankSum=7.508;DP=609;FS=14.901;HRun=7;HaplotypeScore=76.4841;InbreedingCoeff=0.2957;MQ=36.40;MQ0=102;MQRankSum=-5.803;QD=3.45;ReadPosRankSum=0.579;VQSLOD=-0.3624;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:37:66.21:0,66,823	0/0:10,1:10:24.08:0,24,302	./.	./.	0/1:21,3:21:18.08:18,0,388	0/1:11,1:10:6.50:7,0,240	0/0:31,0:23:44.89:0,45,456	./.	0/0:15,0:14:36.07:0,36,435	0/1:20,4:17:46:46,0,408	0/0:13,1:12:24.06:0,24,287	0/0:27,0:23:51.08:0,51,602	0/0:27,0:27:69.45:0,69,840	0/0:34,0:31:81.22:0,81,993	0/0:26,0:23:54.13:0,54,657	0/0:15,0:12:30.10:0,30,377	0/0:31,0:28:66.12:0,66,786	0/0:19,0:16:42.11:0,42,513	0/0:13,0:11:27.09:0,27,337	0/0:15,2:14:36.12:0,36,452	0/0:36,0:28:63.20:0,63,787	0/0:19,3:19:45.10:0,45,548	0/1:18,6:22:99:108,0,332	0/0:25,0:14:30.10:0,30,377	0/0:18,2:17:39.12:0,39,490	1/1:7,10:6:18.04:183,18,0	0/1:2,11:7:19.66:134,0,20	1/1:1,6:2:6.01:61,6,0
chr10	6579301	.	GCCCCTTCGGGACC	G	1451.18	PASS	AB=0.667;AC=7;AF=0.135;AN=52;BaseQRankSum=5.123;DP=525;FS=5.841;HRun=0;HaplotypeScore=160.7877;InbreedingCoeff=0.7207;MQ=33.97;MQ0=103;MQRankSum=-4.299;QD=25.02;ReadPosRankSum=2.517;VQSLOD=2.6120;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:29:57.20:0,57,3656	0/0:11,0:9:24.08:0,24,1497	./.	./.	0/0:16,0:14:36.12:0,36,1989	0/0:12,0:10:27.09:0,27,1661	0/0:30,0:22:60.68:0,61,3538	1/1:11,8:2:3.01:123,3,0	0/0:13,0:12:33.11:0,33,1956	0/0:20,0:13:39.13:0,39,2349	0/0:13,0:12:33.11:0,33,1875	0/0:19,0:14:30.99:0,31,1703	0/0:17,0:17:48.64:0,49,2447	0/0:24,0:21:63.18:0,63,3428	0/0:23,0:20:57.15:0,57,3333	0/0:13,0:10:24.08:0,24,1569	0/0:23,0:21:51.17:0,51,3053	0/0:12,0:10:30.10:0,30,1775	0/0:20,0:9:21.07:0,21,1399	0/0:17,0:13:30.10:0,30,1968	0/0:29,0:22:51.18:0,51,3066	0/0:19,0:18:48.16:0,48,2538	0/0:25,0:23:42.14:0,42,2407	0/0:20,0:11:18.06:0,18,1070	0/0:17,0:14:33.11:0,33,1902	1/1:10,9:8:18.06:736,18,0	0/1:7,7:8:99:475,0,185	1/1:2,4:2:6.02:245,6,0
chr10	6579367	.	AAGG	A	4327.74	PASS	AB=0.500;AC=51;AF=0.911;AN=56;BaseQRankSum=3.700;DP=240;FS=7.490;HRun=0;HaplotypeScore=215.0927;InbreedingCoeff=0.5576;MQ=47.42;MQ0=0;MQRankSum=-2.987;QD=18.49;ReadPosRankSum=1.731;VQSLOD=3.6372;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,17:18:44.37:302,44,0	1/1:0,4:3:8.91:61,9,0	0/0:2,0:2:5.62:0,6,29	0/0:2,0:4:5.16:0,5,81	1/1:1,4:5:10.92:49,11,0	1/1:0,14:14:41.61:296,42,0	1/1:3,9:12:26.73:188,27,0	1/1:1,2:3:6.01:58,6,0	1/1:0,5:5:14.90:111,15,0	1/1:1,11:11:28.96:306,29,0	1/1:0,3:3:8.73:50,9,0	1/1:0,14:14:32.44:268,32,0	1/1:1,11:12:32.59:227,33,0	1/1:1,13:15:34.23:293,34,0	1/1:2,15:17:47.54:362,48,0	0/1:0,5:5:1.12:62,0,1	1/1:1,9:10:26.74:194,27,0	1/1:0,9:8:24.05:261,24,0	1/1:0,6:6:18.03:178,18,0	1/1:1,6:6:10.49:79,10,0	1/1:0,6:8:11.26:68,11,0	1/1:1,7:7:19.67:100,20,0	1/1:2,4:6:6.26:48,6,0	1/1:0,8:8:17.68:119,18,0	1/1:1,14:13:38.42:253,38,0	1/1:1,5:6:17.94:144,18,0	1/1:1,8:9:23.72:176,24,0	1/1:0,3:3:8.98:75,9,0
chr10	6579374	.	C	CTAG	11022.43	PASS	AB=1.000;AC=53;AF=0.946;AN=56;BaseQRankSum=2.616;DP=316;FS=5.010;HRun=0;HaplotypeScore=289.0151;InbreedingCoeff=0.5354;MQ=42.76;MQ0=0;MQRankSum=-3.410;QD=35.22;ReadPosRankSum=2.508;VQSLOD=4.8256;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,16:23:51.12:642,51,0	1/1:1,4:4:9.03:111,9,0	0/1:2,0:2:10.86:22,0,11	0/0:3,0:3:8.62:0,9,89	1/1:2,4:6:15.03:164,15,0	1/1:4,14:18:54.01:704,54,0	1/1:9,9:18:45.06:583,45,0	1/1:5,2:7:18.06:303,18,0	1/1:2,5:7:21.07:305,21,0	1/1:3,11:13:38.80:610,39,0	1/1:3,3:6:15.05:205,15,0	1/1:2,14:16:47.82:592,48,0	1/1:6,11:17:51.16:738,51,0	1/1:7,13:20:56.92:767,57,0	1/1:5,15:20:60.19:840,60,0	1/1:2,5:6:16.29:197,16,0	1/1:5,9:14:36.12:538,36,0	1/1:2,9:10:27.09:453,27,0	1/1:4,6:10:27.09:475,27,0	1/1:2,6:7:21.02:248,21,0	1/1:5,6:11:17.73:227,18,0	1/1:3,5:9:21.05:224,21,0	1/1:5,4:9:17.90:173,18,0	1/1:3,8:11:21.07:274,21,0	1/1:5,14:17:48.15:616,48,0	1/1:4,5:9:24.08:359,24,0	1/1:3,8:11:33.11:458,33,0	1/1:1,3:4:12.04:194,12,0
chr10	6579405	.	T	TG	1136.96	PASS	AB=0.950;AC=35;AF=0.625;AN=56;BaseQRankSum=-1.620;DP=353;FS=22.596;HRun=0;HaplotypeScore=273.6767;InbreedingCoeff=0.1206;MQ=33.95;MQ0=0;MQRankSum=0.056;QD=4.03;ReadPosRankSum=-1.851;VQSLOD=1.6911;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:22:1.18:32,0,1	1/1:8,0:8:1.80:4,2,0	0/1:8,0:8:62.16:62,0,68	0/1:9,0:9:29.35:29,0,112	1/1:10,1:11:0.02:30,0,0	1/1:12,1:13:5.63:42,6,0	0/0:14,0:14:2.83:0,3,6	1/1:10,2:11:19.41:115,19,0	1/1:9,0:9:1.05:38,1,0	1/1:14,2:16:21.81:126,22,0	0/0:6,0:6:2.67:0,3,6	0/1:17,1:17:0.15:47,0,0	0/0:19,0:19:6.41:0,6,25	0/1:16,2:18:14.25:67,0,14	1/1:21,2:23:16.77:218,17,0	0/0:10,0:8:3.13:0,3,16	1/1:14,0:14:3.18:10,3,0	1/1:10,1:11:13.81:64,14,0	1/1:11,4:15:31.95:203,32,0	0/0:10,0:10:1.32:0,1,3	0/1:11,0:11:1.11:25,0,1	0/1:9,1:10:7.78:26,0,8	0/1:9,2:11:0.84:27,0,1	0/0:11,1:12:2.51:0,3,6	0/1:16,1:15:1.29:30,0,1	1/1:8,0:8:9.92:24,10,0	1/1:11,2:13:0.42:43,0,0	1/1:5,0:5:4.47:11,4,0
chr10	6579407	.	A	AC	1217.63	PASS	AB=0.972;AC=30;AF=0.536;AN=56;BaseQRankSum=-4.478;DP=378;FS=5.361;HRun=0;HaplotypeScore=283.2201;InbreedingCoeff=-0.1196;MQ=39.27;MQ0=0;MQRankSum=-2.861;QD=3.78;ReadPosRankSum=-4.348;VQSLOD=1.7507;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:22:2.53:48,0,3	0/0:10,0:10:3.66:0,4,8	0/1:5,3:9:39.86:87,0,40	0/1:10,1:11:81.54:93,0,82	0/1:12,0:12:3.80:26,0,4	0/1:13,0:13:4.35:27,0,4	0/0:16,0:16:5.19:0,5,12	1/1:14,0:13:20.39:148,20,0	0/1:9,0:9:1.35:32,0,1	1/1:16,0:16:12.31:96,12,0	0/0:6,0:6:3.61:0,4,9	0/1:18,0:17:33.52:38,0,34	0/1:18,1:19:12.15:12,0,20	0/1:19,0:19:35.11:42,0,35	1/1:23,0:23:13.51:203,14,0	0/0:12,0:10:4.24:0,4,15	0/1:14,0:14:1.74:2,0,4	1/1:12,0:12:14.13:71,14,0	1/1:16,0:16:31.81:239,32,0	0/1:11,0:11:3.68:16,0,4	0/1:12,0:12:6.71:49,0,7	0/1:13,0:13:18.05:22,0,18	0/1:11,0:11:8.66:21,0,9	0/0:12,0:12:5.10:0,5,12	0/1:18,0:16:17.19:22,0,17	1/1:10,0:10:0.82:17,1,0	0/1:14,0:14:2.59:35,0,3	1/1:6,0:6:4.71:22,5,0
chr10	6581504	.	A	AC	18117.32	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-11.187;DP=671;FS=0.446;HRun=6;HaplotypeScore=64.4761;InbreedingCoeff=0.9792;MQ=88.31;MQ0=1;MQRankSum=-6.017;QD=31.34;ReadPosRankSum=5.601;VQSLOD=4.8327;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,117,1176	1/1:2,5:7:9.03:113,9,0	0/0:29,0:29:47.93:0,48,585	0/0:21,0:21:53.67:0,54,512	1/1:0,18:18:48.13:604,48,0	1/1:1,18:19:48.15:604,48,0	1/1:2,15:17:45.14:566,45,0	1/1:3,21:24:63.20:788,63,0	1/1:1,24:25:69.22:868,69,0	1/1:1,23:24:63.20:791,63,0	1/1:2,17:19:48.15:598,48,0	1/1:0,25:25:66.21:830,66,0	1/1:2,17:19:48.15:604,48,0	1/1:1,31:32:87.28:1094,87,0	1/1:2,31:33:90.29:1132,90,0	1/1:0,21:21:57.18:717,57,0	1/1:2,25:27:72.23:906,72,0	1/1:0,16:16:48.15:604,48,0	1/1:4,13:17:42.13:528,42,0	1/1:4,18:22:48.15:604,48,0	1/1:2,33:34:81.26:1019,81,0	1/1:3,18:21:45.14:566,45,0	1/1:3,20:23:45.14:566,45,0	1/1:4,33:37:99:1241,99,0	1/1:1,21:22:51.16:641,51,0	1/1:3,24:27:72.23:897,72,0	1/1:6,26:32:72.22:895,72,0	1/1:1,15:16:27.09:340,27,0
chr10	6582591	.	ATT	A	22957.85	PASS	AB=0.923;AC=43;AF=0.768;AN=56;BaseQRankSum=11.370;DP=729;FS=11.339;HRun=2;HaplotypeScore=100.4609;InbreedingCoeff=0.8964;MQ=89.97;MQ0=2;MQRankSum=-6.473;QD=41.82;ReadPosRankSum=9.192;VQSLOD=3.1851;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,135,2684	1/1:0,8:7:21.07:342,21,0	0/0:34,0:33:99:0,99,1706	0/0:29,0:29:71.79:0,72,1331	1/1:0,20:20:57.19:929,57,0	1/1:0,20:20:51.17:832,51,0	1/1:0,36:36:93.32:1517,93,0	0/0:37,0:37:99:0,108,2103	1/1:0,29:29:75.26:1223,75,0	1/1:0,24:24:72.25:1175,72,0	1/1:0,14:14:36.12:583,36,0	1/1:0,29:28:84.29:1367,84,0	1/1:0,24:24:62.92:1026,63,0	1/1:0,29:29:69.24:1125,69,0	1/1:0,35:35:90.31:1468,90,0	1/1:0,29:29:75.26:1220,75,0	1/1:0,23:23:69.24:1125,69,0	1/1:0,21:21:57.19:930,57,0	1/1:0,22:22:63.13:944,63,0	1/1:0,16:16:45.08:691,45,0	1/1:0,40:40:99:1761,108,0	1/1:0,15:15:42.14:685,42,0	1/1:0,20:20:51.17:826,51,0	1/1:0,40:40:99:1701,105,0	1/1:0,31:31:90.31:1467,90,0	0/1:22,2:24:22.62:23,0,1214	0/0:30,0:30:90.31:0,90,1788	0/0:5,0:5:15:0,15,228
chr10	6583144	.	AGCATTCTTCCAGTG	A	16084.33	PASS	AB=0.664;AC=35;AF=0.625;AN=56;BaseQRankSum=9.206;DP=332;FS=15.865;HRun=0;HaplotypeScore=226.5835;InbreedingCoeff=-0.1270;MQ=99.59;MQ0=0;MQRankSum=-7.290;QD=58.70;ReadPosRankSum=7.904;VQSLOD=2.9074;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:10,9:19:55.87:663,0,56	1/1:1,1:2:3.01:110,3,0	0/0:21,0:21:59.02:0,59,2303	0/0:25,0:25:69.37:0,69,3476	0/1:5,4:9:24.57:244,0,25	1/1:5,11:16:45.85:1283,46,0	0/1:6,6:12:8.96:424,0,9	0/0:12,0:12:4.56:0,5,197	1/1:3,15:18:49.90:1703,50,0	0/1:6,4:10:88.12:430,0,88	0/1:4,5:9:6.55:238,0,7	1/1:4,9:13:39.05:1104,39,0	1/1:2,7:9:15.43:693,15,0	0/1:6,7:13:3.49:847,0,3	1/1:7,9:16:17.06:1013,17,0	0/1:5,6:11:9.55:673,0,10	1/1:1,2:3:8.96:242,9,0	0/1:4,2:6:32.48:147,0,32	0/1:2,4:6:36.57:436,0,37	0/1:3,3:6:0.04:132,0,0	1/1:8,3:11:4.57:150,5,0	1/1:4,4:8:23.95:604,24,0	0/1:2,5:7:3.91:360,0,4	0/1:9,4:13:13.92:450,0,14	1/1:3,16:19:34.38:1706,34,0	0/1:7,9:16:52.79:980,0,53	0/1:6,9:15:20.89:1017,0,21	0/1:3,4:7:58:432,0,58
chr10	6583161	.	AATTAG	A	6205.88	PASS	AB=0.728;AC=25;AF=0.446;AN=56;BaseQRankSum=15.773;DP=465;FS=4.991;HRun=0;HaplotypeScore=249.6749;InbreedingCoeff=-0.7994;MQ=92.34;MQ0=0;MQRankSum=-11.635;QD=15.59;ReadPosRankSum=12.866;VQSLOD=2.1450;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:22,9:31:99:222,0,1226	0/1:3,1:4:38.57:39,0,165	0/0:23,0:23:69.23:0,69,1919	0/0:28,0:28:84.29:0,84,2634	0/1:8,4:12:96.87:97,0,351	0/1:6,11:16:99:488,0,302	0/1:13,6:19:99:101,0,802	0/0:16,0:16:48.16:0,48,939	0/1:10,15:25:99:705,0,475	0/1:9,4:13:99:176,0,478	0/1:6,5:11:81.28:81,0,393	0/1:11,9:20:99:408,0,587	0/1:3,7:10:99:283,0,205	0/1:9,8:17:99:334,0,453	0/1:12,9:21:99:368,0,555	0/1:7,6:13:99:275,0,372	0/1:13,2:15:60.07:60,0,668	0/1:11,2:13:13.99:14,0,613	0/1:6,4:10:99:184,0,323	0/1:12,3:15:10.44:10,0,677	0/1:15,3:18:32.22:32,0,698	0/1:8,4:12:93.78:266,0,94	0/1:11,5:16:99:138,0,497	0/1:11,4:15:99:164,0,411	0/1:11,16:27:99:715,0,492	0/1:9,9:18:99:432,0,381	0/1:9,9:18:99:423,0,476	0/1:4,4:8:99:189,0,212
chr10	6583166	.	G	GAA	18572.79	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-0.617;DP=526;FS=0.550;HRun=1;HaplotypeScore=193.0347;InbreedingCoeff=0.9813;MQ=90.12;MQ0=0;MQRankSum=-11.140;QD=39.27;ReadPosRankSum=5.476;VQSLOD=4.9148;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,26:40:92.17:1561,92,0	1/1:1,3:4:11.78:195,12,0	0/0:22,0:22:57.19:0,57,892	0/0:31,0:31:87.27:0,87,1350	1/1:5,8:13:32.69:574,33,0	1/1:11,7:17:49.39:563,49,0	1/1:6,13:19:53.55:951,54,0	1/1:1,17:18:54.17:1036,54,0	1/1:16,11:27:72.29:806,72,0	1/1:5,10:15:41.60:669,42,0	1/1:5,9:14:35.38:584,35,0	1/1:9,13:22:58.11:789,58,0	1/1:7,5:12:28.95:324,29,0	1/1:8,10:18:52.78:764,53,0	1/1:9,14:23:61.60:897,62,0	1/1:6,7:13:38.07:508,38,0	1/1:3,15:18:44.77:818,45,0	1/1:2,12:14:38.92:703,39,0	1/1:5,8:15:38.58:572,39,0	1/1:4,12:16:41.97:804,42,0	1/1:3,16:20:51:963,51,0	1/1:8,8:16:29.62:393,30,0	1/1:6,14:20:47.50:788,48,0	1/1:4,15:19:44.29:720,44,0	1/1:17,15:32:75.55:871,76,0	1/1:9,10:19:55.84:741,56,0	1/1:9,11:20:52.78:678,53,0	1/1:4,4:8:23.47:303,23,0
chr10	6583459	.	GT	G	20325.12	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=9.451;DP=672;FS=1.114;HRun=1;HaplotypeScore=210.2329;InbreedingCoeff=0.9951;MQ=88.68;MQ0=0;MQRankSum=-10.037;QD=32.84;ReadPosRankSum=6.964;VQSLOD=4.0039;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,32:37:98.74:1192,99,0	1/1:0,9:9:27.08:326,27,0	0/0:27,0:27:81.23:0,81,1219	0/0:26,0:26:73.80:0,74,1125	1/1:1,13:14:28.98:369,29,0	1/1:0,14:14:42.13:521,42,0	1/1:0,42:42:99:1416,114,0	1/1:3,20:23:61.12:729,61,0	1/1:4,31:35:99:1198,100,0	1/1:2,19:21:53.05:698,53,0	1/1:0,19:19:45.14:542,45,0	1/1:1,26:27:77.19:962,77,0	1/1:3,17:20:55.04:657,55,0	1/1:1,34:35:96.26:1167,96,0	1/1:0,24:24:72.22:883,72,0	1/1:0,20:20:60.19:745,60,0	1/1:0,36:36:99:1270,101,0	1/1:0,18:18:54.17:664,54,0	1/1:0,20:20:57.01:654,57,0	1/1:0,22:22:57.18:699,57,0	1/1:0,48:48:99:1515,122,0	1/1:4,12:16:35.40:371,35,0	1/1:0,11:11:27.08:324,27,0	1/1:3,24:27:62.90:767,63,0	1/1:1,24:25:56.07:680,56,0	1/1:0,22:22:66.21:817,66,0	1/1:1,25:26:74.14:927,74,0	1/1:1,7:8:18.94:232,19,0
chr10	6584294	.	TACAC	T	1575.85	PASS	AB=0.886;AC=33;AF=0.635;AN=52;BaseQRankSum=3.645;DP=571;FS=0.000;HRun=0;HaplotypeScore=121.3714;InbreedingCoeff=0.4391;MQ=60.83;MQ0=19;MQRankSum=1.838;QD=4.04;ReadPosRankSum=1.828;VQSLOD=2.2192;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:34:1.36:3,1,0	1/1:6,0:8:3:28,3,0	0/0:28,0:15:0:0,0,0	./.	1/1:11,0:17:2.68:11,3,0	1/1:12,7:19:18.06:279,18,0	1/1:12,10:22:21.07:325,21,0	0/0:32,0:32:9.03:0,9,137	0/0:12,0:14:14.79:0,15,251	1/1:12,0:22:9.01:84,9,0	0/1:13,0:20:0:0,0,0	0/0:20,0:20:3:0,3,40	0/0:13,0:12:3.01:0,3,50	1/1:16,0:15:0.45:1,0,0	1/1:16,1:20:15.03:201,15,0	1/1:10,13:24:21.06:305,21,0	1/1:7,10:17:12.93:188,13,0	1/1:11,0:15:3:28,3,0	./.	1/1:11,9:20:3.01:46,3,0	0/1:36,0:47:0:0,0,0	1/1:8,5:13:6.49:94,6,0	0/1:16,0:16:0:0,0,0	0/0:21,0:20:0.21:0,0,1	1/1:14,9:22:6.48:94,6,0	0/1:16,0:17:6.85:7,0,250	0/1:16,1:16:21.90:22,0,376	0/0:10,0:10:20.81:0,21,354
chr10	6584328	.	C	CACACACAT	157.06	PASS	AB=0.574;AC=4;AF=0.071;AN=56;BaseQRankSum=-0.190;DP=681;FS=6.775;HRun=0;HaplotypeScore=182.2056;InbreedingCoeff=0.4933;MQ=53.28;MQ0=20;MQRankSum=-1.309;QD=2.09;ReadPosRankSum=-0.360;VQSLOD=2.0451;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:40:21.47:0,21,170	0/0:10,0:10:17.78:0,18,184	0/0:17,0:4:5.16:0,5,73	0/0:25,0:10:17.11:0,17,173	0/0:23,0:23:40.26:0,40,305	0/0:23,0:23:39.02:0,39,539	0/0:27,0:27:42.04:0,42,717	0/0:24,0:24:51.62:0,52,446	0/0:23,0:23:48.44:0,48,547	0/0:31,0:31:63.29:0,63,551	0/0:21,0:21:18.45:0,18,151	1/1:2,29:34:3.01:127,3,0	0/1:5,18:24:24.90:120,0,25	0/0:8,14:22:0.47:0,0,1	0/0:29,0:29:62.91:0,63,579	0/0:24,0:24:25.64:0,26,520	0/0:26,0:26:47.30:0,47,506	0/0:11,0:10:20.96:0,21,202	0/0:11,0:11:25.18:0,25,202	0/0:21,0:21:14.99:0,15,160	0/0:56,0:53:64.20:0,64,510	0/0:17,0:17:32.93:0,33,339	0/1:5,10:15:0.27:1,0,0	0/0:6,17:26:0.36:0,0,0	0/0:31,0:29:36.42:0,36,367	0/0:33,0:32:81.85:0,82,800	0/0:20,0:19:46.20:0,46,612	0/0:11,0:10:27.01:0,27,416
chr10	6585315	.	GC	G	8651.05	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=11.440;DP=696;FS=4.865;HRun=2;HaplotypeScore=69.7691;InbreedingCoeff=0.9742;MQ=90.19;MQ0=0;MQRankSum=-5.394;QD=34.88;ReadPosRankSum=4.084;VQSLOD=5.3941;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,153,2180	0/0:14,0:14:42.13:0,42,610	0/0:20,0:20:40.38:0,40,609	0/0:33,0:33:95.89:0,96,1202	0/0:33,0:33:96.26:0,96,1326	1/1:0,12:12:33.11:428,33,0	1/1:0,21:21:60.20:779,60,0	0/0:24,0:24:69.14:0,69,931	1/1:0,29:29:84.27:1089,84,0	0/0:32,0:32:93.27:0,93,1347	0/0:13,0:13:39.08:0,39,551	0/0:32,0:32:96.31:0,96,1407	0/0:27,0:27:81.22:0,81,1142	0/0:17,0:17:51.15:0,51,742	1/1:0,24:24:63.20:816,63,0	1/1:0,30:30:75.24:973,75,0	1/1:1,30:31:81.26:1051,81,0	0/0:17,0:17:51.16:0,51,744	1/1:0,26:26:75.13:892,75,0	1/1:0,32:32:90.25:1147,90,0	0/0:32,0:32:96.31:0,96,1415	1/1:0,23:23:66.21:854,66,0	0/0:17,0:17:48.16:0,48,717	0/0:30,0:30:84.28:0,84,1251	1/1:1,19:20:48.16:623,48,0	0/0:36,0:36:99:0,105,1545	0/0:19,0:19:57.18:0,57,829	0/0:1,0:1:3.01:0,3,45
chr10	6585659	.	T	TGG	335.53	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.936;DP=601;FS=3.174;HRun=0;HaplotypeScore=142.3560;InbreedingCoeff=0.9940;MQ=86.78;MQ0=5;MQRankSum=-3.395;QD=11.18;ReadPosRankSum=-1.366;VQSLOD=3.4723;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,8:30:30.11:430,30,0	0/0:10,0:10:22.75:0,23,294	0/0:62,0:34:70.43:0,70,1145	0/0:53,0:31:42.45:0,42,666	0/0:20,0:20:54.62:0,55,736	0/0:14,0:14:39.11:0,39,537	0/0:16,0:16:45.54:0,46,546	0/0:17,0:17:44.27:0,44,382	0/0:14,0:14:38.60:0,39,519	0/0:20,0:20:53.89:0,54,723	0/0:17,0:17:48.60:0,49,651	0/0:21,0:21:44.89:0,45,379	0/0:16,0:16:39.01:0,39,359	0/0:12,0:12:26.85:0,27,248	0/0:29,0:29:83.78:0,84,1133	0/0:20,0:20:57.16:0,57,771	0/0:23,0:23:69.10:0,69,958	0/0:22,0:22:66.14:0,66,879	0/0:22,0:22:63.96:0,64,803	0/0:21,0:21:58.01:0,58,803	0/0:15,0:15:45.13:0,45,635	0/0:20,0:20:54.21:0,54,686	0/0:13,0:13:26.34:0,26,219	0/0:16,0:16:35.82:0,36,331	0/0:20,0:20:60.16:0,60,802	0/0:17,0:17:45:0,45,419	0/0:28,0:28:63.76:0,64,562	0/0:13,0:13:37.09:0,37,316
chr10	6585660	.	T	TG	2810.90	PASS	AB=0.823;AC=19;AF=0.339;AN=56;BaseQRankSum=-1.785;DP=596;FS=4.724;HRun=0;HaplotypeScore=120.4952;InbreedingCoeff=0.5419;MQ=86.95;MQ0=5;MQRankSum=-2.323;QD=13.39;ReadPosRankSum=-0.334;VQSLOD=4.6011;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:27:23.17:280,23,0	0/1:10,0:10:21.44:21,0,103	0/0:64,0:34:79.33:0,79,848	0/0:53,0:31:49.14:0,49,479	0/0:22,0:22:17.14:0,17,191	0/0:14,0:14:39.03:0,39,215	0/0:17,0:17:10.47:0,10,156	0/1:17,0:17:22.61:178,0,23	0/0:15,0:15:39.98:0,40,211	0/0:20,0:20:48.38:0,48,235	0/0:17,0:17:15.46:0,15,190	1/1:3,19:22:41.32:462,41,0	1/1:2,14:16:34.79:369,35,0	0/1:3,9:12:8.11:171,0,8	0/0:28,0:28:55.78:0,56,375	0/0:20,0:20:24.58:0,25,214	0/0:22,0:22:53.94:0,54,298	0/0:20,0:20:46.63:0,47,256	0/0:20,0:20:2.74:0,3,154	0/0:20,0:20:31.44:0,31,270	0/0:14,0:14:38.71:0,39,213	0/1:18,1:19:23.32:23,0,163	1/1:1,12:13:11.90:199,12,0	1/1:3,13:16:5.49:254,5,0	0/0:19,1:20:3.54:0,4,200	0/1:5,11:16:10.77:210,0,11	1/1:5,24:29:25.66:547,26,0	1/1:5,8:13:27.89:291,28,0
chr10	6585661	.	T	TG	4057.48	PASS	AB=1.000;AC=33;AF=0.589;AN=56;BaseQRankSum=-3.895;DP=592;FS=2.790;HRun=8;HaplotypeScore=119.3934;InbreedingCoeff=0.2349;MQ=87.31;MQ0=5;MQRankSum=-3.489;QD=10.27;ReadPosRankSum=-6.881;VQSLOD=0.7469;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:31:60.89:440,61,0	0/1:8,0:8:30.11:30,0,32	0/0:62,0:33:45.18:0,45,374	0/0:54,1:33:21.97:0,22,251	0/1:22,0:22:19.88:20,0,34	0/1:14,0:14:25.86:52,0,26	0/1:16,0:16:30.84:49,0,31	1/1:4,15:20:46.12:358,46,0	0/1:17,0:17:19.74:67,0,20	1/1:21,0:21:2.62:157,3,0	0/1:17,0:17:6:6,0,23	1/1:20,0:20:45.10:491,45,0	1/1:16,0:16:36.08:392,36,0	1/1:11,0:11:17.32:200,17,0	0/1:28,0:28:46.62:47,0,50	0/0:19,0:19:2.20:0,2,34	0/0:23,0:23:33.14:0,33,92	0/0:18,0:18:15.80:0,16,53	0/0:19,0:19:10.56:0,11,29	0/1:20,0:20:0.12:0,0,41	0/1:15,0:15:0.98:1,0,31	0/1:17,0:17:23.97:24,0,42	1/1:12,0:12:21.01:222,21,0	1/1:17,0:17:33.49:343,33,0	0/1:20,0:20:6.32:6,0,46	1/1:14,0:14:22.11:263,22,0	1/1:26,0:26:47.79:574,48,0	1/1:13,0:13:30.03:317,30,0
chr10	6586166	.	ATGAATG	A	1180.06	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.797;DP=756;FS=0.000;HRun=0;HaplotypeScore=159.5421;InbreedingCoeff=0.9919;MQ=68.51;MQ0=0;MQRankSum=-6.590;QD=51.31;ReadPosRankSum=-1.905;VQSLOD=3.1449;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,23:23:54.10:1275,54,0	0/0:12,0:12:36.11:0,36,1202	0/0:18,0:18:50.06:0,50,1562	0/0:15,0:15:39.12:0,39,1101	0/0:31,0:31:93.32:0,93,3450	0/0:26,0:26:78.25:0,78,2747	0/0:30,0:30:90.29:0,90,3073	0/0:31,0:31:93.30:0,93,3196	0/0:20,0:20:60.17:0,60,2068	0/0:42,0:42:99:0,126,4367	0/0:22,0:22:66.21:0,66,2309	0/0:26,0:26:78.27:0,78,2751	0/0:35,0:35:99:0,105,3597	0/0:19,0:19:57.20:0,57,2146	0/0:36,0:36:99:0,108,3886	0/0:41,0:41:99:0,123,4216	0/0:39,0:39:99:0,117,4245	0/0:17,0:16:51.18:0,51,1919	0/0:25,0:25:75.24:0,75,2560	0/0:29,0:29:87.28:0,87,3096	0/0:49,0:49:99:0,147,5123	0/0:28,0:28:81.28:0,81,2892	0/0:28,0:28:84.29:0,84,3129	0/0:19,0:19:57.20:0,57,2082	0/0:29,0:29:87.30:0,87,3256	0/0:31,0:31:93.32:0,93,3411	0/0:29,0:29:87.30:0,87,3155	0/0:6,0:6:18.06:0,18,677
chr10	6586705	.	TCTGAGGCAAGAG	T	2192.70	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=8.274;DP=769;FS=0.722;HRun=0;HaplotypeScore=250.5175;InbreedingCoeff=0.9959;MQ=81.01;MQ0=1;MQRankSum=-8.683;QD=42.99;ReadPosRankSum=-1.197;VQSLOD=3.0523;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,49:50:77.97:2288,78,0	0/0:9,0:9:24.08:0,24,1377	0/0:20,0:20:57.60:0,58,1728	0/0:24,0:25:37.99:0,38,2205	0/0:26,0:26:75.24:0,75,3915	0/0:31,0:31:90.31:0,90,5057	0/0:34,0:34:84.26:0,84,4222	0/0:31,0:31:78.25:0,78,4011	0/0:31,0:31:87.30:0,87,4994	0/0:29,0:29:72.20:0,72,3739	0/0:20,0:20:51.17:0,51,2815	0/0:39,0:39:99:0,111,6216	0/0:16,0:16:45.15:0,45,2626	0/0:23,0:23:66.23:0,66,3769	0/0:32,0:32:90.29:0,90,5101	0/0:31,0:31:90.31:0,90,5215	0/0:29,0:29:81.26:0,81,4504	0/0:25,0:25:72.25:0,72,3856	0/0:25,0:25:57.16:0,57,2996	0/0:24,0:24:69.24:0,69,3984	0/0:42,0:42:99:0,114,6408	0/0:29,0:29:75.26:0,75,4201	0/0:17,0:17:45.15:0,45,2723	0/0:24,0:24:69.20:0,69,3506	0/0:35,0:35:93.29:0,93,5287	0/0:31,0:31:81.28:0,81,4427	0/0:32,0:32:84.27:0,84,4671	0/0:8,0:8:24.08:0,24,1238
chr10	6586972	.	GGTGTGTGTGT	G	3174.80	PASS	AB=0.906;AC=38;AF=0.760;AN=50;BaseQRankSum=2.831;DP=707;FS=0.000;HRun=0;HaplotypeScore=204.8542;InbreedingCoeff=0.1755;MQ=58.35;MQ0=28;MQRankSum=-0.959;QD=5.53;ReadPosRankSum=1.036;VQSLOD=2.6497;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:32,0:48:10.48:160,10,0	1/1:7,0:10:9.01:89,9,0	./.	./.	0/1:10,1:17:0.02:0,0,0	1/1:19,0:19:11.95:175,12,0	1/1:40,1:42:5.80:127,6,0	0/0:31,0:29:6.02:0,6,76	0/1:28,0:27:59.46:82,0,59	1/1:21,0:22:12.04:263,12,0	0/0:17,0:21:0.26:0,0,1	1/1:20,0:24:9.03:209,9,0	0/1:17,0:17:0:0,0,0	1/1:8,0:14:14.99:295,15,0	1/1:23,4:26:5.71:175,6,0	1/1:27,5:35:19.39:709,19,0	1/1:29,2:30:8.51:173,9,0	1/1:13,0:17:12.04:256,12,0	1/1:21,3:24:7.11:163,7,0	1/1:14,4:18:2.82:88,3,0	0/1:44,1:45:12.10:12,0,15	0/1:21,6:28:44.58:82,0,45	./.	1/1:18,0:29:2.80:70,3,0	1/1:19,3:22:2.96:20,3,0	0/1:32,0:31:64.10:64,0,125	0/0:12,0:11:4.15:0,4,14	1/1:10,1:10:3.01:88,3,0
chr10	6589505	.	TCA	T	433.47	PASS	AB=1.000;AC=18;AF=0.346;AN=52;BaseQRankSum=7.423;DP=594;FS=4.362;HRun=0;HaplotypeScore=143.0551;InbreedingCoeff=0.5009;MQ=67.21;MQ0=6;MQRankSum=-4.164;QD=2.14;ReadPosRankSum=0.759;VQSLOD=2.2892;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:33:17.96:0,18,159	0/0:11,0:11:26.78:0,27,277	./.	./.	0/0:19,3:21:12:0,12,115	0/0:20,0:20:24.06:0,24,273	0/0:15,0:15:15.04:0,15,157	0/0:22,0:22:9.58:0,10,45	0/0:17,0:17:36.10:0,36,414	0/1:26,0:26:28.45:28,0,248	0/0:23,0:23:1.82:0,2,241	1/1:15,0:16:20.47:93,20,0	1/1:18,0:19:16.01:102,16,0	1/1:15,0:15:17:84,17,0	0/0:22,0:22:27.54:0,28,300	0/0:20,0:18:33.09:0,33,372	0/1:27,0:27:4.48:4,0,440	0/1:20,0:20:31.73:32,0,256	1/1:15,2:16:15.04:161,15,0	0/1:17,0:17:15.59:16,0,139	0/0:33,0:32:47.98:0,48,506	0/0:26,0:26:6.84:0,7,370	1/1:24,0:24:8.52:42,9,0	1/1:21,0:21:2.84:14,3,0	0/0:26,0:26:6.84:0,7,367	0/0:18,0:18:12.84:0,13,113	0/0:26,0:26:3.59:0,4,205	1/1:0,1:1:3.01:32,3,0
chr10	6589537	.	ACACAC	A	728.81	PASS	AB=0.784;AC=5;AF=0.089;AN=56;BaseQRankSum=9.824;DP=684;FS=0.000;HRun=0;HaplotypeScore=182.6660;InbreedingCoeff=-0.1011;MQ=55.21;MQ0=18;MQRankSum=-8.527;QD=6.45;ReadPosRankSum=2.449;VQSLOD=2.4843;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:42:33.08:0,33,671	0/0:13,0:13:32.83:0,33,799	0/0:22,0:12:36.11:0,36,446	0/0:21,0:12:33.10:0,33,409	0/0:25,0:24:67.15:0,67,866	0/0:29,0:29:51.97:0,52,986	0/0:31,0:30:81.82:0,82,1059	0/0:31,0:30:89.51:0,90,1339	0/0:18,0:18:50.27:0,50,1026	0/0:30,0:30:86.75:0,87,1398	0/0:17,0:17:41.99:0,42,916	0/1:15,5:19:64.86:251,0,65	0/1:13,8:22:71.39:251,0,71	0/1:13,7:19:58.62:222,0,59	0/0:28,0:28:75.86:0,76,1227	0/0:19,0:18:52.99:0,53,989	0/0:35,0:35:91.95:0,92,1406	0/0:20,0:20:59.07:0,59,1016	0/0:13,0:13:37.05:0,37,269	0/0:21,0:19:48.82:0,49,798	0/0:49,0:48:99:0,126,1874	0/0:26,0:26:65.62:0,66,1238	0/1:21,5:25:99:109,0,139	0/1:20,5:25:12.01:12,0,100	0/0:24,0:24:67.59:0,68,1227	0/0:29,0:29:86.32:0,86,1374	0/0:22,0:22:57.66:0,58,1263	0/0:2,0:2:6.02:0,6,79
chr10	6589542	.	C	CACAA	4443.56	PASS	AB=0.978;AC=23;AF=0.411;AN=56;BaseQRankSum=-11.173;DP=687;FS=35.997;HRun=0;HaplotypeScore=157.8465;InbreedingCoeff=-0.5199;MQ=56.89;MQ0=18;MQRankSum=1.275;QD=7.89;ReadPosRankSum=-3.947;VQSLOD=1.7916;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:8,37:45:46.27:265,0,46	0/1:13,0:13:72.66:73,0,248	0/0:22,0:12:29.64:0,30,242	0/0:19,0:12:23.67:0,24,253	0/1:29,0:28:99:294,0,136	0/1:28,0:28:99:242,0,221	0/1:33,0:32:72.55:428,0,73	0/0:29,0:28:76.85:0,77,572	0/1:20,0:20:99:102,0,275	0/1:27,0:27:99:124,0,218	0/1:16,0:16:19.66:20,0,264	0/1:19,0:18:76.33:186,0,76	0/1:22,0:22:99:135,0,101	0/1:21,0:20:12.13:233,0,12	0/1:25,0:25:99:183,0,314	0/1:21,0:20:99:144,0,206	0/1:34,0:34:99:334,0,265	0/1:18,0:18:62.02:62,0,197	0/1:14,0:14:16.70:157,0,17	0/1:24,0:22:99:232,0,188	0/1:50,0:49:99:509,0,371	0/1:26,0:26:99:126,0,297	0/1:24,0:23:2.85:264,0,3	1/1:25,0:25:10.14:172,10,0	0/1:26,0:25:99:160,0,267	0/0:28,0:28:43.45:0,43,624	0/0:20,0:20:53:0,53,636	0/0:6,0:6:14.99:0,15,134
chr10	6589978	.	TG	T	2674.16	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=9.122;DP=813;FS=7.066;HRun=1;HaplotypeScore=84.1717;InbreedingCoeff=0.9959;MQ=74.25;MQ0=1;MQRankSum=-1.162;QD=37.14;ReadPosRankSum=0.830;VQSLOD=3.8520;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,72:72:99:2769,199,0	0/0:15,0:15:45.15:0,45,719	0/0:28,0:28:74.56:0,75,1055	0/0:30,0:27:62.76:0,63,846	0/0:21,0:21:63.21:0,63,1001	0/0:28,0:28:84.29:0,84,1342	0/0:32,0:32:83.93:0,84,1336	0/0:33,0:33:99:0,99,1540	0/0:31,0:31:84.29:0,84,1343	0/0:27,0:27:81.28:0,81,1295	0/0:15,0:15:45.15:0,45,719	0/0:33,0:33:99:0,99,1555	0/0:32,0:32:96.29:0,96,1486	0/0:36,0:36:99:0,108,1677	0/0:25,0:25:75.26:0,75,1198	0/0:30,0:30:87.30:0,87,1391	0/0:33,0:33:87.30:0,87,1383	0/0:22,0:22:57.19:0,57,904	0/0:16,0:16:45.15:0,45,720	0/0:35,0:35:99:0,102,1627	0/0:46,0:46:99:0,138,2147	0/0:20,0:20:57.19:0,57,908	0/0:20,0:20:53.70:0,54,860	0/0:47,0:47:99:0,138,2176	0/0:25,0:25:75.26:0,75,1197	0/0:33,0:33:99:0,99,1561	0/0:20,0:20:60.20:0,60,959	0/0:7,0:7:21.07:0,21,335
chr10	6590133	.	A	AACTCG	43944.04	PASS	AB=1.000;AC=45;AF=0.804;AN=56;BaseQRankSum=-12.838;DP=700;FS=6.840;HRun=0;HaplotypeScore=117.1602;InbreedingCoeff=0.9412;MQ=69.74;MQ0=0;MQRankSum=-9.183;QD=75.51;ReadPosRankSum=4.302;VQSLOD=6.7888;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,33:38:93.32:3034,93,0	1/1:2,10:14:33.11:1057,33,0	0/0:14,0:14:39.13:0,39,874	0/0:26,0:25:69.24:0,69,1561	1/1:3,23:29:75.13:2167,75,0	1/1:0,20:23:60.21:1993,60,0	1/1:0,23:27:69.24:2269,69,0	0/0:29,0:29:81.27:0,81,1828	1/1:2,20:23:63.22:2054,63,0	1/1:1,19:22:57.18:1792,57,0	1/1:2,15:19:48.08:1373,48,0	1/1:0,23:28:63.22:2094,63,0	1/1:0,24:28:69.24:2286,69,0	1/1:4,19:24:60.21:1916,60,0	1/1:0,28:30:78.27:2568,78,0	1/1:2,26:31:81.28:2642,81,0	1/1:5,32:39:90.31:2936,90,0	1/1:1,11:14:24.08:798,24,0	1/1:3,10:15:42.11:1205,42,0	1/1:5,16:21:60.21:1857,60,0	1/1:1,26:31:72.25:2385,72,0	1/1:1,14:15:39.13:1296,39,0	1/1:2,21:26:63.08:2082,63,0	1/1:2,29:34:84.28:2795,84,0	1/1:1,14:17:42.14:1346,42,0	0/1:34,0:34:0.55:1,0,2138	0/0:28,0:28:81.26:0,81,1840	0/0:21,0:21:60.21:0,60,1398
chr10	6591104	.	A	ACATT	5090.98	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-10.292;DP=678;FS=1.000;HRun=0;HaplotypeScore=110.8808;InbreedingCoeff=0.9974;MQ=65.73;MQ0=1;MQRankSum=-4.045;QD=59.89;ReadPosRankSum=-0.815;VQSLOD=6.1413;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,108,1940	0/0:11,0:11:33.11:0,33,607	0/0:23,0:21:48.15:0,48,790	0/0:19,0:18:45.15:0,45,791	0/0:23,0:23:63.22:0,63,1164	0/0:15,0:15:45.14:0,45,808	0/0:24,0:24:63.20:0,63,1132	1/1:6,16:20:51.17:1286,51,0	0/0:31,0:31:90.27:0,90,1633	0/0:27,0:27:69.20:0,69,1243	0/0:16,0:16:48.16:0,48,895	0/0:36,0:36:96.29:0,96,1735	0/0:30,0:30:81.28:0,81,1490	0/0:26,0:26:72.23:0,72,1278	0/0:26,0:26:75.24:0,75,1357	0/0:23,0:23:69.22:0,69,1222	0/0:40,0:40:99:0,111,2062	0/0:20,0:20:54.19:0,54,1008	0/0:26,0:26:72.22:0,72,1238	0/0:21,0:21:63.22:0,63,1174	0/0:45,0:45:99:0,123,2245	0/0:19,0:19:57.18:0,57,1024	0/0:20,0:20:51.17:0,51,930	0/0:24,0:24:60.14:0,60,1032	0/0:7,0:7:18.06:0,18,325	1/1:3,23:24:66.23:1689,66,0	1/1:2,19:21:53.87:1396,54,0	1/1:3,11:14:27.09:720,27,0
chr10	6591502	.	A	AAAAT	2329.35	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-4.831;DP=290;FS=1.360;HRun=0;HaplotypeScore=58.3188;InbreedingCoeff=0.8628;MQ=64.27;MQ0=0;MQRankSum=-2.609;QD=34.77;ReadPosRankSum=1.974;VQSLOD=3.3739;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:24.04:0,24,355	1/1:3,2:5:9.03:184,9,0	0/0:1,0:1:3:0,3,26	0/0:6,0:5:5.98:0,6,57	1/1:8,4:12:23.98:453,24,0	0/0:13,0:13:30.09:0,30,498	0/0:6,0:5:15.04:0,15,238	0/0:27,0:27:75.18:0,75,1102	0/0:5,0:4:9.02:0,9,132	1/1:8,4:8:15.01:213,15,0	1/1:9,4:13:33.04:542,33,0	0/0:4,0:4:9.03:0,9,160	0/0:9,0:9:23.98:0,24,273	0/0:6,0:6:15.04:0,15,239	0/0:6,0:6:6.01:0,6,78	0/0:5,0:5:15.02:0,15,210	0/0:30,0:30:72.02:0,72,1116	1/1:6,10:16:45.06:984,45,0	0/0:11,0:11:30.02:0,30,365	0/0:11,0:11:30.06:0,30,442	1/1:7,2:9:9.01:131,9,0	0/0:9,0:9:21.03:0,21,288	0/0:8,0:7:21.03:0,21,288	0/0:7,0:7:18.04:0,18,284	0/0:15,0:15:42.10:0,42,633	0/0:14,0:14:33.08:0,33,481	0/0:13,0:13:33.05:0,33,447	0/0:7,0:7:21.05:0,21,331
chr10	6591545	.	T	TA	9405.14	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-3.922;DP=308;FS=3.531;HRun=5;HaplotypeScore=43.7569;InbreedingCoeff=0.7532;MQ=80.16;MQ0=0;MQRankSum=-2.850;QD=32.77;ReadPosRankSum=3.356;VQSLOD=5.2113;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,8:9:24.08:316,24,0	1/1:0,4:4:9.03:118,9,0	0/0:12,0:11:18.56:0,19,189	0/0:9,0:7:4.90:0,5,58	1/1:1,10:11:30.10:395,30,0	1/1:1,15:16:42.14:553,42,0	1/1:0,5:5:15.05:197,15,0	1/1:5,38:43:99:1353,105,0	1/1:1,5:6:12.04:158,12,0	1/1:1,9:8:24.08:315,24,0	1/1:0,9:9:23.90:272,24,0	1/1:0,8:8:24.08:316,24,0	1/1:1,7:8:15.05:197,15,0	1/1:1,7:8:18.06:237,18,0	1/1:1,4:5:12.04:158,12,0	1/1:0,7:7:21.07:276,21,0	1/1:1,19:20:54.18:710,54,0	1/1:6,10:16:36.06:438,36,0	1/1:1,11:12:33.11:434,33,0	1/1:0,5:5:12.04:158,12,0	1/1:2,4:6:6.02:79,6,0	1/1:0,4:4:8.94:96,9,0	1/1:1,8:9:15.05:196,15,0	1/1:1,5:6:15.05:197,15,0	1/1:0,12:12:33.11:434,33,0	1/1:2,15:17:45.13:577,45,0	1/1:0,21:20:63.20:829,63,0	1/1:0,10:10:30.10:395,30,0
chr10	6592597	.	ATG	A	39.16	PASS	AB=0.840;AC=3;AF=0.054;AN=56;BaseQRankSum=3.151;DP=559;FS=7.070;HRun=0;HaplotypeScore=96.9370;InbreedingCoeff=-0.0506;MQ=59.25;MQ0=11;MQRankSum=-2.297;QD=0.55;ReadPosRankSum=-0.891;VQSLOD=1.2215;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:33.09:0,33,464	0/1:11,1:12:74.51:75,0,119	0/0:42,0:21:56.20:0,56,1019	0/0:36,0:13:32.60:0,33,602	0/0:9,2:11:15.05:0,15,232	0/0:17,0:17:45.02:0,45,784	0/0:29,0:29:77.96:0,78,1321	0/0:29,0:29:66.10:0,66,1485	0/0:31,1:32:46.65:0,47,1225	0/0:21,0:21:63.09:0,63,932	0/0:9,0:9:15.05:0,15,231	0/0:18,0:18:20.29:0,20,382	0/0:13,0:13:23.83:0,24,274	0/0:6,0:6:15:0,15,153	0/0:18,0:18:54.05:0,54,967	0/0:8,0:8:24.08:0,24,441	0/0:16,0:16:44.70:0,45,696	0/1:11,6:17:53.06:53,0,332	0/0:15,0:14:33.55:0,34,517	0/0:19,0:19:51.03:0,51,849	0/1:35,7:41:1.22:1,0,571	0/0:16,0:16:40.74:0,41,825	0/0:15,1:16:21.07:0,21,332	0/0:25,0:25:20.69:0,21,340	0/0:16,0:16:45.15:0,45,811	0/0:20,0:20:59.37:0,59,1018	0/0:15,0:15:45.15:0,45,812	0/0:18,0:18:42.96:0,43,761
chr10	6592599	.	G	GCACACACACACA	3205.80	PASS	AB=0.944;AC=21;AF=0.404;AN=52;BaseQRankSum=1.197;DP=598;FS=6.860;HRun=0;HaplotypeScore=186.4266;InbreedingCoeff=0.7154;MQ=55.54;MQ0=11;MQRankSum=-5.737;QD=13.30;ReadPosRankSum=-2.036;VQSLOD=1.5852;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:31:12.51:373,13,0	1/1:9,0:11:18.02:381,18,0	0/0:39,0:17:2.04:0,2,6	./.	1/1:12,0:12:3.01:42,3,0	0/0:16,0:18:30.10:0,30,932	0/0:24,0:28:45.02:0,45,1203	0/0:27,0:29:8.94:0,9,635	0/0:25,0:31:53.54:0,54,1549	1/1:15,0:27:26.97:680,27,0	./.	1/1:13,4:23:6.02:344,6,0	1/1:7,3:18:9.50:468,10,0	1/1:2,1:9:6.02:292,6,0	0/0:17,0:18:30.10:0,30,1003	0/0:8,0:8:12.03:0,12,337	0/0:13,0:15:30.40:0,30,829	0/1:16,0:17:20.78:586,0,21	0/0:15,0:15:10.19:0,10,318	0/0:16,0:18:27.09:0,27,649	1/1:34,0:43:2.32:77,2,0	0/0:15,0:15:27.09:0,27,791	1/1:16,0:16:6.02:141,6,0	1/1:20,5:33:0.47:1,0,0	0/0:15,0:16:12.04:0,12,399	0/0:20,0:21:27.07:0,27,609	0/0:15,0:15:21.06:0,21,649	0/0:15,0:19:45.02:0,45,1340
chr10	6595535	.	CT	C	302.67	PASS	AB=0.875;AC=16;AF=0.615;AN=26;BaseQRankSum=-0.410;DP=47;FS=30.842;HRun=1;HaplotypeScore=23.2326;InbreedingCoeff=0.2074;MQ=105.38;MQ0=5;MQRankSum=-0.462;QD=10.44;ReadPosRankSum=0.821;VQSLOD=-0.5687;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,1:1:3.01:42,3,0	./.	0/0:10,0:4:3.01:0,3,32	0/1:14,0:9:20.64:21,0,145	./.	1/1:1,1:2:6:64,6,0	./.	0/0:4,0:4:11.97:0,12,119	./.	1/1:0,3:3:9.01:99,9,0	./.	./.	./.	1/1:0,1:1:3.01:42,3,0	./.	1/1:0,1:1:3.01:42,3,0	./.	./.	1/1:1,2:2:3.01:40,3,0	./.	0/0:2,0:2:2.99:0,3,24	0/1:2,1:3:19.94:35,0,20	1/1:1,0:1:3:25,3,0	0/0:1,0:1:3.01:0,3,34	./.	./.	./.	./.
chr10	6597005	.	T	TA	10627.15	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=11.365;DP=467;FS=4.776;HRun=0;HaplotypeScore=82.2871;InbreedingCoeff=0.9702;MQ=70.31;MQ0=0;MQRankSum=-0.033;QD=29.20;ReadPosRankSum=2.553;VQSLOD=4.8136;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,16:16:33.10:410,33,0	1/1:1,10:11:24.08:307,24,0	0/0:7,0:6:11.59:0,12,165	0/0:9,0:5:8.97:0,9,78	1/1:3,23:26:65.25:786,65,0	1/1:2,20:22:47.96:589,48,0	1/1:2,5:7:18.04:209,18,0	0/0:28,0:28:84.27:0,84,1152	1/1:2,14:16:42.11:516,42,0	1/1:3,23:26:68.83:807,69,0	1/1:2,15:17:46.19:526,46,0	1/1:3,9:12:30.06:362,30,0	1/1:2,14:16:39.04:465,39,0	1/1:0,7:7:18.06:222,18,0	1/1:1,11:12:32.87:410,33,0	1/1:0,7:7:18.06:222,18,0	1/1:1,27:28:63.19:780,63,0	1/1:0,24:24:54.17:680,54,0	1/1:1,9:10:30.07:353,30,0	1/1:7,29:36:84:999,84,0	1/1:1,10:11:23.88:298,24,0	1/1:4,3:7:18.50:214,19,0	1/1:0,8:8:15.05:186,15,0	1/1:1,19:20:50.19:611,50,0	1/1:0,25:25:54.17:674,54,0	0/0:12,0:12:33.11:0,33,462	0/0:22,0:22:66.21:0,66,907	0/0:25,0:25:75.23:0,75,1028
chr10	6597006	.	T	TAA	8869.28	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=11.474;DP=473;FS=4.888;HRun=5;HaplotypeScore=104.7032;InbreedingCoeff=0.9645;MQ=69.53;MQ0=0;MQRankSum=-0.388;QD=23.97;ReadPosRankSum=0.909;VQSLOD=3.0342;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:17:36.03:337,36,0	1/1:11,0:11:24.03:228,24,0	0/0:6,0:5:12.83:0,13,124	0/0:9,0:5:6.01:0,6,69	1/1:28,0:28:72.01:661,72,0	1/1:21,0:21:48.03:450,48,0	1/1:7,0:7:21:206,21,0	0/0:28,0:28:75.22:0,75,931	1/1:17,0:17:45.05:438,45,0	1/1:26,1:27:75.05:780,75,0	1/1:17,0:17:48.08:526,48,0	1/1:13,0:13:38.95:352,39,0	1/1:16,0:16:38.63:341,39,0	1/1:7,0:7:18.02:166,18,0	1/1:12,0:12:33.04:308,33,0	1/1:7,0:7:18.02:165,18,0	1/1:25,1:26:63.06:598,63,0	1/1:23,0:23:53.99:481,54,0	1/1:9,0:9:26.90:254,27,0	1/1:38,2:40:95.92:912,96,0	1/1:10,0:10:24.02:217,24,0	1/1:11,0:11:30.51:342,31,0	1/1:8,0:8:15.01:137,15,0	1/1:20,0:20:48.05:441,48,0	1/1:23,0:23:54.08:528,54,0	0/0:13,0:13:33.10:0,33,421	0/0:22,0:22:63.18:0,63,788	0/0:25,0:25:75.24:0,75,953
chr10	6597576	.	CT	C	17769.46	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-0.954;DP=604;FS=0.676;HRun=4;HaplotypeScore=101.3386;InbreedingCoeff=0.9989;MQ=80.67;MQ0=0;MQRankSum=-8.926;QD=31.39;ReadPosRankSum=5.662;VQSLOD=4.4861;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,32:32:84.26:1007,84,0	1/1:1,10:11:30.09:360,30,0	0/0:17,0:17:39.08:0,39,475	0/0:20,1:21:46.08:0,46,609	1/1:0,15:15:39.12:467,39,0	1/1:1,16:17:45.14:538,45,0	1/1:3,21:24:63.19:756,63,0	1/1:2,30:32:90.08:1034,90,0	1/1:1,31:32:84.26:1007,84,0	1/1:1,22:23:44.28:746,44,0	1/1:1,17:18:51.05:577,51,0	1/1:2,18:20:51.16:612,51,0	1/1:2,31:33:87.27:1042,87,0	1/1:1,16:17:45.14:540,45,0	1/1:0,20:20:60.18:719,60,0	1/1:0,20:20:48.15:576,48,0	1/1:1,30:31:87.27:1043,87,0	1/1:0,11:11:33.10:395,33,0	1/1:1,19:20:56.75:580,57,0	1/1:0,18:18:51.11:595,51,0	1/1:1,27:28:72.22:863,72,0	1/1:3,13:16:29.68:333,30,0	1/1:1,14:16:30.03:359,30,0	1/1:1,24:25:66.20:792,66,0	1/1:1,26:27:72.22:863,72,0	1/1:0,16:16:48.13:564,48,0	1/1:4,22:26:63.19:755,63,0	1/1:0,18:18:54.17:647,54,0
chr10	6599005	.	ATG	A	4022.99	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=13.074;DP=958;FS=4.444;HRun=0;HaplotypeScore=133.9022;InbreedingCoeff=0.9793;MQ=66.32;MQ0=0;MQRankSum=0.391;QD=30.25;ReadPosRankSum=-2.783;VQSLOD=4.4025;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:69.47:0,69,1449	0/0:12,0:12:33.11:0,33,552	0/0:35,0:36:77.97:0,78,1219	0/0:27,0:23:57.15:0,57,917	0/0:40,0:40:99:0,114,1879	0/0:35,0:35:96.31:0,96,1578	0/0:36,0:36:87.26:0,87,1400	1/1:13,44:58:99:1627,135,0	0/0:25,0:25:66.21:0,66,1074	0/0:41,0:41:84.27:0,84,1374	0/0:31,0:31:81.28:0,81,1351	0/0:40,0:40:99:0,102,1701	0/0:30,0:30:78.26:0,78,1278	0/0:49,0:49:99:0,126,2071	0/0:51,0:51:99:0,126,2104	0/0:32,0:32:81.28:0,81,1342	0/0:22,0:21:54.13:0,54,845	0/0:20,0:20:51.17:0,51,852	0/0:21,0:21:42.12:0,42,652	0/0:35,0:35:81.28:0,81,1355	0/0:75,0:75:99:0,190,3074	0/0:38,0:38:99:0,99,1646	0/0:27,0:27:78.25:0,78,1268	0/0:31,0:31:81.28:0,81,1355	0/0:27,0:27:72.23:0,72,1176	1/1:9,30:39:7.91:1175,8,0	1/1:1,18:19:48.15:611,48,0	1/1:2,15:17:48.63:611,49,0
chr10	6599096	.	GTC	G	3689.95	PASS	AB=0.979;AC=30;AF=0.536;AN=56;BaseQRankSum=-5.763;DP=926;FS=1.647;HRun=0;HaplotypeScore=209.0855;InbreedingCoeff=-0.3073;MQ=57.81;MQ0=15;MQRankSum=0.348;QD=4.57;ReadPosRankSum=-10.957;VQSLOD=0.2758;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:52,0:52:71.09:268,0,71	1/1:10,0:10:6.80:31,7,0	0/1:27,0:12:9.79:10,0,86	0/1:39,0:13:44.21:44,0,103	1/1:22,0:22:9.06:74,9,0	0/1:17,2:19:28.20:188,0,28	0/1:36,0:36:16.13:356,0,16	0/0:45,0:43:99:0,105,1340	0/1:34,2:36:99:233,0,125	1/1:34,0:34:46.64:356,47,0	0/1:20,0:20:1.17:38,0,1	0/1:37,0:36:90.93:102,0,91	0/1:26,0:26:56.61:114,0,57	0/1:38,0:38:82.93:136,0,83	0/1:41,0:41:88.07:252,0,88	0/1:27,1:28:58.34:149,0,58	0/1:28,1:30:78.01:115,0,78	1/1:39,0:39:13.14:106,13,0	1/1:18,0:16:0.48:156,0,0	0/1:28,0:28:23.98:244,0,24	1/1:80,1:79:29.40:227,29,0	0/1:33,0:33:68.95:156,0,69	0/1:27,0:27:41.83:42,0,104	0/1:51,1:52:66.07:66,0,198	0/1:30,3:33:82.35:228,0,82	0/0:36,0:36:62.81:0,63,1232	0/0:22,0:22:51.56:0,52,1064	0/0:16,0:16:45.12:0,45,771
chr10	6599098	.	CTG	C	3549.33	PASS	AB=0.977;AC=25;AF=0.446;AN=56;BaseQRankSum=0.351;DP=932;FS=5.087;HRun=0;HaplotypeScore=214.6796;InbreedingCoeff=0.6096;MQ=57.77;MQ0=15;MQRankSum=1.245;QD=6.79;ReadPosRankSum=-2.123;VQSLOD=2.8280;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:24,28:52:90.26:1079,90,0	1/1:10,0:10:14.54:59,15,0	0/0:28,0:11:4.44:0,4,71	0/0:39,0:11:10.96:0,11,80	1/1:20,0:20:18.30:58,18,0	0/1:19,0:19:35.01:35,0,268	0/1:34,0:34:11.04:11,0,373	0/0:45,0:43:92.83:0,93,1362	0/0:35,0:36:11.92:0,12,665	1/1:35,0:35:38.06:420,38,0	0/1:20,1:21:10.47:36,0,10	1/1:36,0:35:26.82:355,27,0	1/1:25,1:26:14.68:236,15,0	1/1:38,0:38:27.72:403,28,0	0/0:40,0:41:26.57:0,27,690	0/0:29,0:29:6.91:0,7,466	0/0:31,0:31:23.38:0,23,522	1/1:39,2:41:24.91:161,25,0	0/0:19,0:17:8.71:0,9,115	0/0:29,0:29:16.73:0,17,364	1/1:76,2:76:55.60:228,56,0	0/0:34,0:34:53.14:0,53,576	0/1:24,2:26:2.72:99,0,3	1/1:51,2:53:30.98:345,31,0	0/1:34,0:34:24.22:24,0,611	0/0:37,0:37:7.74:0,8,965	0/0:24,0:24:32.79:0,33,943	0/0:17,0:17:42.11:0,42,632
chr10	6599100	.	G	GTC	5511.12	PASS	AB=1.000;AC=28;AF=0.500;AN=56;BaseQRankSum=-6.548;DP=940;FS=3.770;HRun=0;HaplotypeScore=208.5040;InbreedingCoeff=0.3861;MQ=57.25;MQ0=14;MQRankSum=2.954;QD=9.25;ReadPosRankSum=0.154;VQSLOD=4.6785;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:64.90:0,65,548	1/1:1,9:10:18.02:308,18,0	0/0:26,0:9:11.62:0,12,194	0/0:42,0:11:31.47:0,31,258	1/1:3,18:22:27.27:519,27,0	0/1:19,0:19:27.13:27,0,117	0/1:35,0:35:86.40:86,0,217	0/0:45,0:43:99:0,117,1523	0/1:36,0:36:27.06:27,0,325	1/1:2,34:37:75.37:988,75,0	1/1:7,15:22:16.11:452,16,0	1/1:38,0:37:36.54:197,37,0	1/1:25,0:25:28.07:119,28,0	1/1:42,0:42:39.74:319,40,0	0/0:42,0:42:0.98:0,1,295	0/0:30,0:30:41.81:0,42,263	0/0:30,0:30:49.70:0,50,311	1/1:9,30:43:13.40:697,13,0	0/1:17,0:16:39.76:40,0,103	0/1:29,0:29:99:141,0,139	1/1:13,61:73:16.08:1266,16,0	0/1:34,0:34:20.52:21,0,235	0/1:26,0:26:15.88:47,0,16	1/1:52,0:52:37.08:221,37,0	0/1:34,0:34:36.60:37,0,221	0/0:33,1:34:19.61:0,20,1132	0/0:24,0:24:66.62:0,67,947	0/0:18,0:18:45.12:0,45,629
chr10	6599182	.	C	CGTCT	9377.73	PASS	AB=0.567;AC=9;AF=0.161;AN=56;BaseQRankSum=-12.453;DP=804;FS=0.741;HRun=0;HaplotypeScore=134.8702;InbreedingCoeff=0.8709;MQ=86.80;MQ0=0;MQRankSum=-7.960;QD=61.70;ReadPosRankSum=0.990;VQSLOD=6.5861;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,47:52:99:3178,120,0	0/0:14,0:14:39.11:0,39,679	0/0:34,0:34:93.31:0,93,1628	0/0:28,0:28:78.12:0,78,1266	0/0:23,0:23:66.21:0,66,1199	0/0:26,0:26:72.22:0,72,1265	0/0:32,0:32:93.28:0,93,1658	1/1:7,29:35:87.25:2017,87,0	0/0:35,0:35:99:0,99,1751	0/0:32,0:32:87.24:0,87,1527	0/0:21,0:21:51.17:0,51,952	0/0:37,0:37:99:0,105,1861	0/0:28,0:28:66.21:0,66,1184	0/0:32,0:32:96.24:0,96,1603	0/0:35,0:35:99:0,105,1928	0/0:27,0:27:75.24:0,75,1344	0/0:32,0:32:96.32:0,96,1757	0/0:27,0:27:54.18:0,54,975	0/0:22,0:22:51.16:0,51,902	0/0:25,0:25:69.22:0,69,1249	0/0:44,0:44:99:0,114,2090	0/0:29,0:29:78.25:0,78,1424	0/0:18,0:18:54.18:0,54,992	0/0:34,0:34:96.26:0,96,1714	0/0:17,0:17:51.16:0,51,919	0/1:8,25:34:15.59:2188,0,16	1/1:0,18:19:51.18:1356,51,0	1/1:0,9:9:24.08:639,24,0
chr10	6600028	.	TCACACACA	T	1856.47	PASS	AB=0.799;AC=28;AF=0.538;AN=52;BaseQRankSum=5.002;DP=482;FS=0.000;HRun=0;HaplotypeScore=129.2134;InbreedingCoeff=0.3299;MQ=64.67;MQ0=10;MQRankSum=-5.777;QD=6.42;ReadPosRankSum=0.396;VQSLOD=2.4649;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:31:9.89:130,10,0	0/0:8,0:8:12.04:0,12,264	0/0:28,0:22:0.47:0,0,1	./.	0/0:21,0:20:21.07:0,21,667	0/1:19,4:24:24.03:116,0,24	1/1:19,1:21:9.83:89,10,0	1/1:20,0:20:0.47:1,0,0	1/1:7,4:11:6.02:145,6,0	0/0:13,0:13:15.05:0,15,377	0/0:13,0:13:15.04:0,15,372	1/1:5,3:8:9.03:220,9,0	0/0:8,2:10:3.01:0,3,43	0/0:13,5:18:2.90:0,3,16	1/1:11,4:15:12.04:260,12,0	1/1:6,3:9:2.23:25,2,0	0/1:23,0:30:57.30:81,0,57	0/0:16,0:18:30.10:0,30,703	1/1:13,1:13:3.01:74,3,0	0/1:11,3:14:21.25:95,0,21	0/0:25,0:23:21.04:0,21,462	1/1:12,2:14:6.02:111,6,0	1/1:8,2:10:3.01:69,3,0	0/1:18,6:24:8.46:149,0,8	./.	0/1:10,0:11:1.69:18,0,2	0/1:9,0:23:7.51:271,0,8	1/1:3,0:7:9.03:167,9,0
chr10	6601343	.	T	TGTGTGTGTGTGTGTGC	3872.07	PASS	AB=0.910;AC=48;AF=0.857;AN=56;BaseQRankSum=1.611;DP=486;FS=13.634;HRun=0;HaplotypeScore=223.1384;InbreedingCoeff=0.1107;MQ=46.10;MQ0=13;MQRankSum=-2.049;QD=8.80;ReadPosRankSum=0.436;VQSLOD=1.2682;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:13:6:51,6,0	1/1:3,0:3:6.01:68,6,0	0/0:46,0:19:42.09:0,42,542	0/1:48,0:21:13.77:14,0,428	0/1:0,9:14:0:0,0,0	1/1:19,0:19:17.82:200,18,0	1/1:11,0:11:11.68:153,12,0	0/1:26,0:26:94.49:94,0,442	1/1:20,0:20:9.42:101,9,0	1/1:19,0:19:48.79:486,49,0	1/1:7,0:7:5.78:40,6,0	1/1:16,0:15:14.69:164,15,0	1/1:22,0:22:32.91:335,33,0	1/1:13,0:13:8.52:100,9,0	1/1:18,0:18:2.70:19,3,0	1/1:21,0:20:23.49:208,23,0	1/1:12,0:12:17.68:204,18,0	1/1:18,0:15:34.08:892,34,0	1/1:16,0:14:24.02:172,24,0	1/1:12,0:12:5.09:67,5,0	1/1:24,0:23:10.59:149,11,0	1/1:13,0:13:4.22:30,4,0	1/1:15,0:15:2.18:44,2,0	1/1:16,0:16:1.90:6,2,0	1/1:13,0:13:8.23:78,8,0	0/1:13,0:13:99:129,0,140	0/1:11,0:11:28.51:57,0,29	0/1:3,0:3:9.83:10,0,12
chr10	6601376	.	G	GCTCTCTCT	3906.65	PASS	AB=0.923;AC=44;AF=0.786;AN=56;BaseQRankSum=3.938;DP=417;FS=0.667;HRun=0;HaplotypeScore=200.9994;InbreedingCoeff=0.2596;MQ=63.19;MQ0=4;MQRankSum=-2.333;QD=12.25;ReadPosRankSum=0.105;VQSLOD=2.8052;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:8,1:11:2.62:119,3,0	1/1:5,0:5:0.29:0,0,0	0/0:46,0:32:60.98:0,61,1006	0/0:38,0:27:25.95:0,26,662	0/1:8,0:8:0:0,0,0	1/1:14,0:14:13.97:209,14,0	0/1:9,0:10:0.57:1,0,1	1/1:27,0:26:16.32:144,16,0	0/1:18,0:18:24.03:176,0,24	1/1:17,0:17:0.22:123,0,0	1/1:6,0:6:2.94:25,3,0	1/1:10,8:20:3.93:753,4,0	0/1:12,2:13:19.22:114,0,19	1/1:5,1:6:1.59:110,2,0	1/1:12,0:11:0.33:0,0,0	1/1:16,0:16:1.06:330,1,0	0/1:5,0:8:3.66:93,0,4	1/1:8,0:8:10.89:206,11,0	1/1:23,0:22:30.76:440,31,0	1/1:10,0:10:6.41:44,6,0	1/1:16,0:15:2.53:24,3,0	1/1:11,0:11:5.26:38,5,0	0/1:14,1:15:0.01:0,0,0	0/0:10,2:14:1.45:0,1,29	1/1:13,0:13:6.43:111,6,0	1/1:15,0:14:4.12:412,4,0	1/1:12,0:11:7.56:292,8,0	1/1:2,0:2:6.02:141,6,0
chr10	6601405	.	C	CT	1433.65	PASS	AB=0.834;AC=25;AF=0.446;AN=56;BaseQRankSum=7.949;DP=385;FS=3.236;HRun=1;HaplotypeScore=126.3806;InbreedingCoeff=-0.1844;MQ=56.55;MQ0=8;MQRankSum=-1.591;QD=6.52;ReadPosRankSum=3.383;VQSLOD=1.0754;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:20,0:18:20.28:36,0,20	0/0:2,0:2:2.74:0,3,12	0/0:58,0:29:54.31:0,54,769	0/0:56,0:24:49.76:0,50,539	0/0:6,0:5:2.65:0,3,39	1/1:4,4:7:10.28:144,10,0	1/1:9,1:10:0.93:2,1,0	0/0:13,0:11:27.09:0,27,359	0/1:4,5:10:12.13:172,0,12	0/1:10,2:11:63.87:64,0,265	1/1:5,0:5:3:25,3,0	0/1:18,1:18:50.67:172,0,51	0/1:13,1:11:18.56:19,0,41	0/1:8,1:9:36.29:39,0,36	0/0:12,0:12:7.57:0,8,84	0/1:6,6:12:56.22:214,0,56	0/1:5,0:4:3.30:3,0,5	0/1:4,2:6:71.20:80,0,71	0/1:7,3:7:99:108,0,139	0/0:6,1:7:6.02:0,6,75	0/0:10,0:7:0:0,0,0	0/1:14,1:13:8.12:18,0,8	1/1:9,3:12:2.30:10,2,0	0/1:12,0:10:0.35:0,0,0	1/1:9,2:9:4.75:63,5,0	0/1:7,6:13:99:193,0,238	0/1:8,4:9:60.02:151,0,60	0/1:2,2:4:24.49:72,0,24
chr10	6601408	.	GTA	G	557.08	PASS	AB=0.950;AC=29;AF=0.580;AN=50;BaseQRankSum=5.567;DP=389;FS=15.902;HRun=0;HaplotypeScore=127.6455;InbreedingCoeff=0.3354;MQ=51.67;MQ0=10;MQRankSum=-0.154;QD=2.63;ReadPosRankSum=3.417;VQSLOD=1.5836;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:19:4.14:19,4,0	./.	0/0:56,0:26:18.50:0,19,664	0/0:52,0:21:37.12:0,37,707	1/1:6,0:5:1.68:4,2,0	1/1:8,0:7:0.40:2,0,0	./.	1/1:14,0:12:11.82:155,12,0	0/0:10,0:10:1.23:0,1,15	0/0:12,0:11:13.05:0,13,88	./.	0/1:20,0:19:31.86:38,0,32	1/1:11,3:11:1.16:22,1,0	0/0:9,0:9:4.93:0,5,22	0/0:10,2:12:5.61:0,6,24	0/1:13,0:13:0.14:0,0,14	1/1:7,0:6:0.70:3,1,0	0/1:5,1:6:8.11:25,0,8	0/1:11,0:8:2.95:18,0,3	0/1:8,0:8:8.27:8,0,9	0/0:10,0:7:1.25:0,1,4	1/1:12,4:13:5.89:56,6,0	0/1:11,2:13:0.02:0,0,0	0/1:12,1:11:0.17:0,0,0	1/1:11,0:9:1.35:8,1,0	1/1:14,0:13:27.29:154,27,0	1/1:8,3:10:17.81:101,18,0	1/1:2,2:4:11.44:84,11,0
chr10	6601412	.	GTGTGTGTC	G	583.68	PASS	AB=0.981;AC=13;AF=0.232;AN=56;BaseQRankSum=-0.795;DP=486;FS=4.623;HRun=0;HaplotypeScore=166.4612;InbreedingCoeff=0.3213;MQ=45.96;MQ0=13;MQRankSum=-1.005;QD=3.84;ReadPosRankSum=0.649;VQSLOD=2.5730;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:23:6.01:0,6,104	0/0:6,0:5:4.55:0,5,63	0/0:49,0:20:18.48:0,18,284	0/0:50,0:19:22.58:0,23,291	0/0:9,0:8:9.03:0,9,135	0/0:9,0:8:8.42:0,8,51	0/1:12,0:12:0.54:1,0,1	1/1:13,0:11:29.60:202,30,0	0/0:15,0:15:2.25:0,2,84	0/0:20,0:18:37.11:0,37,323	0/0:7,0:6:6.02:0,6,128	0/1:25,0:23:22.27:22,0,60	0/0:18,0:15:11.07:0,11,147	0/0:16,0:16:12.48:0,12,71	0/0:18,0:18:12.36:0,12,94	0/0:17,0:16:19.12:0,19,110	0/0:9,0:8:6.72:0,7,25	0/1:13,0:11:1.67:2,0,97	0/1:15,0:12:36.71:37,0,49	0/0:12,0:12:5.85:0,6,46	0/0:23,0:19:3.12:0,3,16	0/1:21,0:18:4.75:5,0,72	0/0:15,0:15:1.47:0,1,4	0/1:16,0:14:0.09:0,0,1	0/0:15,0:13:6.28:0,6,116	1/1:20,0:17:13.25:171,13,0	0/1:11,2:10:2.70:149,0,3	1/1:2,2:4:7.40:139,7,0
chr10	6601418	.	GTC	G	1275.66	PASS	AB=0.970;AC=26;AF=0.464;AN=56;BaseQRankSum=-3.611;DP=538;FS=43.547;HRun=0;HaplotypeScore=157.3976;InbreedingCoeff=0.1538;MQ=39.69;MQ0=15;MQRankSum=2.765;QD=3.68;ReadPosRankSum=-3.097;VQSLOD=0.9793;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:27:5.22:34,5,0	0/0:7,0:6:1.77:0,2,3	0/0:46,0:17:18.37:0,18,232	0/0:44,0:15:22.58:0,23,247	1/1:11,0:10:7.63:45,8,0	0/0:12,0:11:8.95:0,9,47	0/0:15,0:15:0.91:0,1,1	1/1:20,0:18:33.08:283,33,0	0/0:16,0:16:2:0,2,75	0/1:22,0:19:76.09:76,0,108	0/0:6,0:6:0.81:0,1,2	0/1:25,0:23:25.81:26,0,35	1/1:21,2:20:9.33:117,9,0	0/1:17,0:17:12.07:12,0,29	0/1:18,1:19:16.76:17,0,17	0/0:18,0:17:17.40:0,17,107	0/0:11,0:10:2.36:0,2,9	0/1:13,2:13:31.73:80,0,32	0/1:14,0:11:22.63:76,0,23	0/1:14,1:15:8.29:8,0,9	0/1:29,0:24:7.96:17,0,8	1/1:19,4:20:13.80:104,14,0	1/1:19,0:19:3.02:37,3,0	0/0:14,1:13:1.41:0,1,3	0/1:18,0:15:0.07:21,0,0	1/1:29,0:25:47.32:351,47,0	0/1:13,1:11:2.56:50,0,3	1/1:5,0:5:10.37:82,10,0
chr10	6601420	.	CTGTG	C	819.49	PASS	AB=0.910;AC=33;AF=0.589;AN=56;BaseQRankSum=1.653;DP=604;FS=6.933;HRun=0;HaplotypeScore=171.5108;InbreedingCoeff=0.1349;MQ=37.40;MQ0=16;MQRankSum=1.554;QD=2.01;ReadPosRankSum=1.501;VQSLOD=2.2743;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:25,6:30:3.37:84,0,3	1/1:6,1:6:1.58:19,2,0	0/0:43,0:16:5.87:0,6,35	0/0:44,0:15:8.96:0,9,72	0/1:9,3:12:29.55:30,0,38	1/1:15,1:15:3.27:21,3,0	1/1:13,8:21:0.21:1,0,0	0/0:24,0:22:16.57:0,17,87	1/1:19,1:20:2.31:23,2,0	0/1:22,2:21:31.74:116,0,32	1/1:6,0:6:4.74:16,5,0	0/1:27,0:26:1.58:25,0,2	0/1:23,1:21:1.46:106,0,1	1/1:17,0:17:4.70:29,5,0	0/1:19,1:20:5.20:51,0,5	1/1:19,1:19:5.98:68,6,0	0/0:14,0:13:6.32:0,6,26	0/1:15,1:14:4.01:119,0,4	0/0:17,0:14:4.93:0,5,14	1/1:13,6:19:3.01:48,3,0	1/1:33,1:29:0.75:1,1,0	0/1:22,4:23:42.87:50,0,43	1/1:21,0:21:9.36:77,9,0	1/1:18,1:17:0.08:1,0,0	0/0:18,4:19:5.71:0,6,45	0/0:33,0:29:4.94:0,5,117	0/1:17,0:14:14.96:33,0,15	1/1:6,0:6:5.34:51,5,0
chr10	6601454	.	GTA	G	138.30	PASS	AB=0.987;AC=13;AF=0.232;AN=56;BaseQRankSum=5.771;DP=638;FS=1.841;HRun=0;HaplotypeScore=138.5830;InbreedingCoeff=-0.1347;MQ=41.60;MQ0=12;MQRankSum=-6.714;QD=0.57;ReadPosRankSum=-2.723;VQSLOD=2.1754;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:33:12.10:0,12,152	0/0:13,0:12:14.78:0,15,146	0/1:16,1:13:13.67:14,0,135	0/0:25,0:12:7.75:0,8,107	0/0:19,0:20:25.70:0,26,260	0/0:21,0:21:22.15:0,22,139	0/0:27,0:26:16.26:0,16,121	0/0:38,0:35:30.08:0,30,574	0/0:21,0:21:8.73:0,9,56	0/1:26,0:23:48.27:48,0,257	0/0:12,0:11:21:0,21,216	1/1:20,1:18:1.94:13,2,0	0/0:25,0:22:22.75:0,23,263	0/1:20,1:21:13.47:13,0,92	0/1:20,1:21:43.45:43,0,73	0/1:17,0:16:16.93:17,0,40	0/1:13,0:14:0.82:1,0,70	0/1:14,0:12:42.20:42,0,72	0/1:12,0:11:15.33:15,0,94	0/0:21,0:21:22.98:0,23,171	0/0:47,0:45:10.53:0,11,195	0/0:32,0:30:35.17:0,35,305	0/1:20,0:20:1.20:1,0,101	0/0:27,0:25:11.54:0,12,169	0/0:25,0:24:19.99:0,20,186	0/1:42,0:38:66.03:66,0,377	0/1:17,0:15:0.47:0,0,113	0/0:8,0:8:15.86:0,16,112
chr10	6601976	.	AAAAAGCAAAAAAAC	A	5270.69	PASS	AB=0.579;AC=7;AF=0.125;AN=56;BaseQRankSum=-4.931;DP=636;FS=29.004;HRun=0;HaplotypeScore=330.7658;InbreedingCoeff=0.8333;MQ=73.08;MQ0=0;MQRankSum=-7.543;QD=70.28;ReadPosRankSum=0.269;VQSLOD=3.0931;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:90.29:0,90,3993	0/0:9,0:9:18.06:0,18,977	0/0:23,0:22:61.08:0,61,2876	0/0:27,0:26:50.04:0,50,2362	0/0:42,0:42:99:0,113,5231	0/0:21,0:21:48.16:0,48,2395	0/0:25,0:24:57.18:0,57,2687	1/1:5,16:21:47.95:1051,48,0	0/0:24,0:24:60.19:0,60,3050	0/0:39,0:39:99:0,111,5089	0/0:17,0:17:48.11:0,48,2314	0/0:27,0:27:75.22:0,75,3482	0/0:17,0:17:48.16:0,48,2320	0/0:15,0:15:27.09:0,27,1341	0/0:14,0:14:39.12:0,39,1451	0/0:17,0:17:33.11:0,33,1713	0/0:27,0:27:75.25:0,75,3709	0/0:11,0:11:33.08:0,33,1442	0/0:13,0:13:36.09:0,36,1053	0/0:29,0:29:84.26:0,84,3778	0/0:19,0:19:51.16:0,51,2553	0/0:30,0:30:78.27:0,78,4132	0/0:34,0:34:89.91:0,90,4366	0/0:25,0:25:66.20:0,66,3008	0/0:20,0:20:54.19:0,54,2751	0/1:6,16:22:99:1559,0,275	1/1:4,20:24:42.14:1693,42,0	1/1:0,8:8:24.08:968,24,0
chr10	6601982	.	CA	C	13240.37	PASS	AB=0.905;AC=49;AF=0.875;AN=56;BaseQRankSum=0.016;DP=630;FS=14.730;HRun=7;HaplotypeScore=139.7549;InbreedingCoeff=0.7498;MQ=74.63;MQ0=0;MQRankSum=-6.293;QD=23.86;ReadPosRankSum=6.420;VQSLOD=3.2083;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,35:35:93.21:948,93,0	1/1:1,8:9:18.04:184,18,0	0/0:26,0:25:61.99:0,62,758	0/0:30,0:29:24.50:0,25,507	1/1:5,38:43:99:1130,111,0	1/1:0,19:19:48.11:490,48,0	1/1:2,19:21:51.11:520,51,0	0/0:19,0:19:1.21:0,1,99	1/1:1,23:24:57.13:582,57,0	1/1:2,37:39:99:1131,111,0	1/1:1,16:17:45.10:459,45,0	1/1:3,24:27:69.15:704,69,0	1/1:2,16:18:45.10:459,45,0	1/1:2,13:15:30.07:306,30,0	1/1:3,14:17:36.08:367,36,0	1/1:0,16:16:36.08:367,36,0	1/1:2,25:27:75.17:765,75,0	1/1:2,9:11:24.05:245,24,0	1/1:5,10:15:30.06:306,30,0	1/1:3,26:29:75.16:764,75,0	1/1:1,16:17:48.11:490,48,0	1/1:2,27:29:78.18:796,78,0	1/1:2,34:36:81.18:827,81,0	1/1:2,22:24:60.14:612,60,0	1/1:0,19:19:54.12:551,54,0	0/1:17,2:19:15.58:95,0,16	1/1:21,0:21:28.52:91,29,0	1/1:8,0:8:16.30:52,16,0
chr10	6603119	.	G	GC	1299.46	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-7.325;DP=620;FS=8.079;HRun=4;HaplotypeScore=72.8607;InbreedingCoeff=0.8090;MQ=82.40;MQ0=0;MQRankSum=-3.685;QD=33.32;ReadPosRankSum=-0.052;VQSLOD=3.9062;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,37:39:99:1394,102,0	0/0:9,0:9:27:0,27,280	0/0:25,0:25:57.14:0,57,627	0/0:19,0:19:48.08:0,48,524	0/0:11,0:11:27.07:0,27,303	0/0:11,0:11:33.08:0,33,363	0/0:35,0:35:99:0,102,1124	0/0:32,0:32:90.20:0,90,977	0/0:38,0:38:99:0,105,1162	0/0:16,0:16:42.09:0,42,463	0/0:3,0:3:3.01:0,3,34	0/0:36,0:36:99:0,108,1214	0/0:21,0:21:57.16:0,57,646	0/0:22,0:22:63.17:0,63,706	0/0:41,0:41:99:0,114,1284	0/0:27,0:27:81.20:0,81,899	0/0:38,0:38:99:0,114,1292	0/0:19,0:19:48.14:0,48,544	0/0:25,0:25:72.19:0,72,807	0/0:6,0:6:12.03:0,12,136	0/0:36,0:36:99:0,99,1122	0/0:7,0:7:18.05:0,18,204	0/0:7,0:7:18.05:0,18,204	0/0:28,0:28:72.18:0,72,805	0/0:8,0:8:24.05:0,24,262	0/0:21,0:21:60.17:0,60,679	0/0:33,0:33:90.22:0,90,999	0/0:7,0:6:18.05:0,18,204
chr10	6603404	.	CT	C	2876.21	PASS	AB=0.697;AC=39;AF=0.722;AN=54;BaseQRankSum=-1.676;DP=319;FS=0.715;HRun=10;HaplotypeScore=40.5011;InbreedingCoeff=0.5047;MQ=56.70;MQ0=19;MQRankSum=3.331;QD=11.69;ReadPosRankSum=3.118;VQSLOD=2.3108;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,6:13:17.97:156,18,0	1/1:3,7:10:14.99:130,15,0	0/1:28,1:7:5.44:5,0,110	0/0:25,0:10:13.03:0,13,153	1/1:1,15:16:38.99:338,39,0	1/1:2,3:5:6:52,6,0	1/1:3,4:5:12:104,12,0	0/0:9,0:5:12.03:0,12,132	1/1:4,3:7:8.91:70,9,0	1/1:1,13:14:35.99:312,36,0	1/1:3,10:13:26.99:234,27,0	1/1:0,4:4:9:78,9,0	1/1:1,8:9:20.99:182,21,0	1/1:1,6:7:12:104,12,0	1/1:0,3:3:3:26,3,0	1/1:2,5:7:11.99:104,12,0	1/1:3,13:15:26.99:234,27,0	0/1:2,3:4:24.15:43,0,24	./.	0/1:7,7:14:18.20:88,0,18	1/1:3,4:7:11.99:104,12,0	0/1:6,9:14:9.20:158,0,9	0/1:6,12:17:0.57:247,0,1	1/1:6,4:10:8.74:78,9,0	1/1:5,12:17:21.22:204,21,0	0/0:15,0:15:22.26:0,22,221	0/0:13,0:13:36.07:0,36,385	0/0:7,0:6:14.91:0,15,119
chr10	6604172	.	CAT	C	7462.11	PASS	AB=0.987;AC=36;AF=0.643;AN=56;BaseQRankSum=18.170;DP=716;FS=0.284;HRun=0;HaplotypeScore=177.6772;InbreedingCoeff=0.6139;MQ=92.73;MQ0=0;MQRankSum=-6.191;QD=14.92;ReadPosRankSum=10.396;VQSLOD=3.9430;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,108,2041	0/1:5,0:5:4.09:64,0,4	0/0:33,0:33:89.52:0,90,1833	0/0:32,0:32:86.40:0,86,1656	1/1:25,0:25:32.10:356,32,0	1/1:21,0:21:11.44:293,11,0	1/1:29,0:29:16.41:453,16,0	0/0:38,0:38:99:0,114,2198	1/1:22,0:22:44.91:381,45,0	1/1:22,0:22:45.12:352,45,0	0/1:12,0:12:3.39:138,0,3	0/1:18,0:18:13.24:232,0,13	1/1:24,0:24:42.96:413,43,0	1/1:22,0:22:13.73:322,14,0	0/1:32,3:35:1.62:464,0,2	1/1:23,0:23:19.30:348,19,0	1/1:32,0:32:14.16:473,14,0	1/1:16,0:16:34.65:218,35,0	0/1:14,0:14:4.75:191,0,5	1/1:21,0:21:38.15:344,38,0	1/1:46,0:46:46.65:613,47,0	1/1:34,0:34:73.30:626,73,0	1/1:25,1:26:26.27:404,26,0	0/1:25,0:25:12.06:291,0,12	1/1:28,0:28:58.66:488,59,0	0/0:30,0:30:59.40:0,59,1671	0/0:32,0:32:96.32:0,96,1910	0/0:14,0:14:42.14:0,42,852
chr10	6604173	.	AT	A	10280.35	PASS	AB=0.511;AC=40;AF=0.714;AN=56;BaseQRankSum=14.668;DP=719;FS=0.000;HRun=1;HaplotypeScore=156.8159;InbreedingCoeff=0.8807;MQ=93.09;MQ0=0;MQRankSum=-4.979;QD=20.56;ReadPosRankSum=8.684;VQSLOD=4.3237;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,108,1642	0/1:0,5:5:0.66:85,0,1	0/0:36,0:36:99:0,102,1573	0/0:30,0:30:89.98:0,90,1322	1/1:2,23:25:35.33:470,35,0	1/1:2,19:21:54.32:443,54,0	1/1:4,25:29:71.39:629,71,0	0/0:39,0:39:99:0,117,1787	1/1:1,20:21:62.76:518,63,0	1/1:2,20:22:48.69:508,49,0	0/1:1,11:12:5.60:177,0,6	1/1:4,15:19:54.73:454,55,0	1/1:2,21:23:65.76:523,66,0	1/1:1,20:21:43.96:474,44,0	1/1:7,28:35:35.60:663,36,0	1/1:3,20:23:38.81:488,39,0	1/1:6,27:33:71.57:630,72,0	1/1:1,15:16:38.46:319,38,0	1/1:3,12:15:23.18:290,23,0	1/1:2,19:21:42.20:415,42,0	1/1:5,40:45:88.85:902,89,0	1/1:2,32:34:82.54:731,83,0	1/1:3,23:26:50.48:486,50,0	1/1:5,21:26:30.91:411,31,0	1/1:1,27:28:70.76:664,71,0	0/0:29,2:31:37.61:0,38,1311	0/0:32,0:32:96.31:0,96,1510	0/0:14,0:14:42.14:0,42,671
chr10	6604175	.	CT	C	10413.63	PASS	AB=0.511;AC=40;AF=0.714;AN=56;BaseQRankSum=14.601;DP=712;FS=0.597;HRun=1;HaplotypeScore=155.0213;InbreedingCoeff=0.8719;MQ=91.98;MQ0=0;MQRankSum=-4.519;QD=20.83;ReadPosRankSum=8.033;VQSLOD=4.5924;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,105,1649	0/1:0,5:5:2.98:85,0,3	0/0:34,0:34:99:0,99,1583	0/0:29,0:29:87.26:0,87,1326	1/1:2,23:25:32.34:470,32,0	1/1:1,19:20:56.87:467,57,0	1/1:2,25:27:65.89:602,66,0	0/0:36,0:36:99:0,108,1713	1/1:2,20:22:65.77:547,66,0	1/1:2,20:24:53.90:560,54,0	0/1:1,11:12:4.97:177,0,5	1/1:1,15:16:47.89:405,48,0	1/1:2,21:23:65.76:523,66,0	1/1:2,20:22:45.52:497,46,0	1/1:6,28:34:25.53:636,26,0	1/1:5,20:25:41.80:537,42,0	1/1:5,27:32:71.15:633,71,0	1/1:1,15:16:38.46:319,38,0	1/1:2,12:15:23.99:293,24,0	1/1:3,19:22:41.05:417,41,0	1/1:5,40:45:86.31:901,86,0	1/1:3,32:35:84.25:756,84,0	1/1:1,23:26:48.81:486,49,0	1/1:4,21:25:29.85:413,30,0	1/1:2,27:29:72.13:689,72,0	0/0:30,2:32:40.61:0,41,1380	0/0:31,0:31:93.32:0,93,1484	0/0:14,0:14:42.14:0,42,671
chr10	6605023	.	TA	T	3473.67	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=3.260;DP=632;FS=5.176;HRun=8;HaplotypeScore=78.5128;InbreedingCoeff=0.9991;MQ=73.49;MQ0=0;MQRankSum=-0.650;QD=23.47;ReadPosRankSum=2.166;VQSLOD=4.4961;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,47:52:99:1187,123,0	0/0:1,0:19:40.25:0,40,205	0/0:17,0:17:28.88:0,29,305	0/0:11,0:11:25.10:0,25,252	0/0:7,0:34:75.20:0,75,413	0/0:13,0:13:36.09:0,36,418	0/0:25,0:25:72.19:0,72,842	1/1:2,24:26:66.06:617,66,0	0/0:15,0:15:45.14:0,45,540	0/0:6,0:22:52.08:0,52,293	0/0:6,0:21:40.56:0,41,226	0/0:18,0:18:39.09:0,39,447	0/0:19,0:19:51.16:0,51,616	0/0:17,0:17:48.07:0,48,551	0/0:24,0:24:66.19:0,66,786	0/0:16,0:16:45.07:0,45,515	0/0:13,0:13:36.08:0,36,416	0/0:6,0:24:48.88:0,49,249	0/0:22,0:22:54.16:0,54,644	0/0:25,0:25:66.19:0,66,784	0/0:5,0:16:34.63:0,35,186	0/0:33,0:33:84.25:0,84,1003	0/0:30,0:30:57.97:0,58,901	0/0:28,0:28:81.13:0,81,924	0/0:21,0:21:63.18:0,63,750	1/1:3,25:28:69.10:666,69,0	1/1:3,30:33:78.05:743,78,0	1/1:0,9:9:27.04:260,27,0
chr10	6605247	.	GAC	G	1284.91	PASS	AB=0.979;AC=26;AF=0.500;AN=52;BaseQRankSum=9.435;DP=575;FS=14.351;HRun=0;HaplotypeScore=137.8182;InbreedingCoeff=-0.3241;MQ=41.80;MQ0=12;MQRankSum=-8.468;QD=2.75;ReadPosRankSum=6.878;VQSLOD=0.8368;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:40,0:40:19.24:177,0,19	0/0:3,0:2:5.99:0,6,64	./.	./.	0/1:28,0:28:26.27:26,0,114	0/1:15,0:15:33.82:48,0,34	0/0:9,2:11:24.06:0,24,322	0/1:17,6:20:99:262,0,268	0/1:23,0:23:68.60:69,0,71	0/1:17,0:17:53.15:53,0,154	1/1:19,0:19:5.96:49,6,0	0/1:19,0:19:50.65:51,0,111	0/1:29,0:29:55.06:166,0,55	1/1:13,0:13:15:135,15,0	0/1:22,0:22:52.74:68,0,53	0/1:17,0:17:19.37:19,0,58	1/1:28,0:28:2.67:17,3,0	0/1:24,0:23:12.90:13,0,30	0/1:23,0:21:35.23:35,0,317	0/1:27,0:27:67.90:77,0,68	0/1:28,5:30:26.84:27,0,332	0/1:24,0:24:4.37:4,0,233	1/1:18,0:18:11.43:91,11,0	0/0:26,0:26:21.03:0,21,275	0/1:11,0:11:46.38:46,0,74	0/0:29,0:29:33.56:0,34,523	0/0:24,0:24:3.90:0,4,97	1/1:14,0:14:1.62:10,2,0
chr10	6605253	.	CAGACAGACAGACAGACAGACAG	C	12438.96	PASS	AB=0.849;AC=47;AF=0.904;AN=52;BaseQRankSum=1.172;DP=589;FS=0.000;HRun=0;HaplotypeScore=189.1803;InbreedingCoeff=-0.0102;MQ=43.41;MQ0=16;MQRankSum=-0.533;QD=22.62;ReadPosRankSum=2.534;VQSLOD=3.7705;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:2,39:40:21.07:1089,21,0	1/1:4,0:2:3.01:89,3,0	./.	0/0:6,0:1:0:0,0,0	1/1:6,27:33:5.58:293,6,0	1/1:1,16:17:6.02:310,6,0	1/1:10,0:10:8.92:65,9,0	0/1:24,0:21:99:118,0,117	1/1:1,22:23:9.03:463,9,0	1/1:0,17:17:36.05:903,36,0	1/1:0,19:19:5.99:299,6,0	1/1:3,16:19:9.03:485,9,0	1/1:3,28:31:27.09:1455,27,0	1/1:1,11:12:15.05:765,15,0	1/1:1,20:21:9.03:462,9,0	1/1:0,15:15:3.01:152,3,0	1/1:3,27:29:7.27:342,7,0	0/1:4,19:22:23.47:177,0,23	1/1:6,18:21:50.99:1410,51,0	1/1:5,24:28:12.04:591,12,0	1/1:34,0:31:32.65:696,33,0	1/1:5,19:24:6.75:159,7,0	1/1:3,16:19:12.04:574,12,0	./.	1/1:3,8:11:6.02:311,6,0	0/1:32,0:32:2.67:502,0,3	1/1:23,0:23:11.62:250,12,0	1/1:15,0:15:21.07:482,21,0
chr10	6605255	.	GAC	G	1359.47	PASS	AB=0.980;AC=29;AF=0.537;AN=54;BaseQRankSum=7.901;DP=585;FS=38.705;HRun=0;HaplotypeScore=138.7329;InbreedingCoeff=0.1465;MQ=42.99;MQ0=18;MQRankSum=-4.253;QD=3.10;ReadPosRankSum=6.377;VQSLOD=1.1605;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:41,0:40:20.59:200,21,0	0/0:4,0:1:2.04:0,2,6	./.	0/0:7,0:1:0.47:0,0,1	0/1:33,0:33:29.06:29,0,37	1/1:17,0:17:6.01:57,6,0	0/0:7,4:10:14.95:0,15,121	0/0:22,0:20:11.44:0,11,319	1/1:23,0:22:9.01:83,9,0	0/1:17,0:17:41.65:80,0,42	1/1:19,0:19:5.96:49,6,0	0/1:18,0:18:51.93:62,0,52	0/1:30,0:30:11.77:196,0,12	1/1:12,0:12:15:134,15,0	1/1:20,0:20:9.01:83,9,0	1/1:16,0:15:3:28,3,0	1/1:30,0:29:5.35:31,5,0	1/1:23,0:22:7.20:49,7,0	0/1:24,0:21:99:119,0,145	0/1:28,1:28:9.90:112,0,10	0/1:28,6:31:67.15:67,0,101	0/1:24,0:23:16.26:16,0,56	1/1:18,1:19:11.43:91,11,0	0/0:24,0:23:6.02:0,6,84	0/1:10,0:10:46.31:46,0,55	0/0:30,0:30:47.80:0,48,483	0/0:25,0:25:9.29:0,9,34	0/0:15,0:15:11.27:0,11,30
chr10	6605257	.	CAGACAGACAGACAGACAG	C	10619.58	PASS	AB=1.000;AC=47;AF=0.870;AN=54;BaseQRankSum=0.932;DP=587;FS=2.592;HRun=0;HaplotypeScore=166.1983;InbreedingCoeff=0.2192;MQ=42.59;MQ0=20;MQRankSum=-0.494;QD=19.38;ReadPosRankSum=2.818;VQSLOD=3.5881;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:41,0:40:11.56:721,0,12	1/1:4,0:1:3.01:40,3,0	0/0:9,0:1:3.01:0,3,55	0/0:6,0:1:0:0,0,0	1/1:32,0:32:5.66:197,6,0	1/1:16,0:16:6.02:212,6,0	0/1:11,0:9:0:0,0,0	1/1:22,0:20:39.09:659,39,0	1/1:23,0:22:9.03:315,9,0	1/1:17,0:17:29.46:568,29,0	1/1:19,0:19:5.99:201,6,0	1/1:19,0:19:9.03:338,9,0	1/1:30,0:30:27.09:1012,27,0	1/1:14,0:13:15.05:519,15,0	1/1:20,0:20:9.03:314,9,0	1/1:17,0:15:3.01:103,3,0	1/1:29,0:28:7.27:243,7,0	0/1:23,0:22:25.29:143,0,25	1/1:27,0:23:36.56:775,37,0	1/1:28,0:27:12.04:394,12,0	1/1:33,0:31:20.48:290,20,0	1/1:23,0:22:6.75:110,7,0	1/1:19,0:19:12.04:378,12,0	./.	1/1:11,0:10:6.02:213,6,0	1/1:4,26:30:64.23:1339,64,0	1/1:0,25:25:11.71:542,12,0	1/1:0,15:15:21.07:992,21,0
chr10	6605259	.	GAC	G	1706.96	PASS	AB=0.993;AC=43;AF=0.796;AN=54;BaseQRankSum=5.717;DP=587;FS=29.422;HRun=0;HaplotypeScore=132.1559;InbreedingCoeff=0.2781;MQ=42.12;MQ0=25;MQRankSum=-0.538;QD=3.37;ReadPosRankSum=4.383;VQSLOD=0.9493;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:41,0:40:20.38:152,20,0	1/1:5,0:1:3.01:43,3,0	0/0:9,0:1:3.01:0,3,43	0/1:7,0:2:1.28:1,0,36	1/1:30,0:30:5.04:32,5,0	1/1:16,0:16:5.88:36,6,0	1/1:11,1:8:8.92:65,9,0	0/0:23,0:20:43.50:0,43,535	1/1:23,0:22:7.35:31,7,0	0/1:17,0:17:1.49:140,0,1	1/1:19,0:19:5.81:40,6,0	1/1:18,0:18:8.93:77,9,0	1/1:29,1:30:24.22:152,24,0	1/1:14,0:13:13.79:77,14,0	1/1:20,0:20:7:29,7,0	1/1:17,0:15:0.89:2,1,0	1/1:29,1:28:5.87:54,6,0	1/1:22,0:21:3.32:60,3,0	0/1:28,0:24:71.97:341,0,72	1/1:27,0:26:11.86:94,12,0	1/1:27,7:31:27.51:254,28,0	1/1:22,0:21:3.33:16,3,0	1/1:20,0:19:11.32:70,11,0	./.	1/1:10,0:9:5.91:38,6,0	0/1:28,1:29:30.99:31,0,261	0/0:25,0:25:5.44:0,5,20	0/1:15,0:15:2.37:11,0,2
chr10	6605267	.	GAC	G	1038.76	PASS	AB=0.975;AC=36;AF=0.667;AN=54;BaseQRankSum=3.811;DP=601;FS=25.302;HRun=0;HaplotypeScore=130.4009;InbreedingCoeff=0.1574;MQ=42.76;MQ0=41;MQRankSum=-1.994;QD=2.08;ReadPosRankSum=3.958;VQSLOD=0.9479;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:41,0:40:8.64:136,9,0	1/1:5,0:1:3.01:43,3,0	0/0:12,0:6:7.95:0,8,153	0/0:11,0:5:8.05:0,8,78	1/1:29,0:29:5.17:41,5,0	1/1:16,0:16:5.88:36,6,0	0/0:13,1:7:2.88:0,3,15	0/0:24,0:18:2.14:0,2,99	0/1:25,0:22:2.18:13,0,2	0/1:17,0:17:38.16:43,0,38	1/1:19,0:19:5.77:39,6,0	1/1:18,0:17:8.93:76,9,0	1/1:30,0:29:6.17:105,6,0	1/1:14,0:13:5.47:61,5,0	0/1:22,0:20:6.49:10,0,6	0/0:17,0:15:2.50:0,2,9	1/1:31,1:28:5.79:52,6,0	1/1:23,0:21:7.10:55,7,0	0/1:26,0:21:94.60:155,0,95	0/1:30,0:26:0.79:44,0,1	0/1:28,7:31:8.50:9,0,24	1/1:21,0:20:3.30:16,3,0	1/1:21,0:18:9.17:51,9,0	./.	1/1:9,0:8:5.91:38,6,0	0/1:26,1:27:66.96:130,0,67	0/1:25,0:25:0.79:1,0,2	1/1:15,0:15:7.18:32,7,0
chr10	6605273	.	CAG	C	3146.46	PASS	AB=0.973;AC=45;AF=0.833;AN=54;BaseQRankSum=5.111;DP=616;FS=0.865;HRun=0;HaplotypeScore=122.9307;InbreedingCoeff=0.2937;MQ=44.64;MQ0=42;MQRankSum=-4.236;QD=5.70;ReadPosRankSum=5.650;VQSLOD=3.0126;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:41,0:40:12.03:182,0,12	0/0:3,2:1:1.25:0,1,3	0/0:20,0:13:36.11:0,36,523	0/0:16,0:8:11.50:0,11,136	1/1:29,0:29:5.18:46,5,0	1/1:16,0:16:6.01:59,6,0	1/1:5,11:9:3.01:43,3,0	1/1:10,15:20:40.76:423,41,0	1/1:24,1:22:9.02:90,9,0	1/1:17,0:17:21.81:303,22,0	1/1:19,0:19:5.99:61,6,0	1/1:19,0:17:9:86,9,0	1/1:30,0:29:26.98:255,27,0	1/1:14,0:13:15.03:149,15,0	1/1:21,1:20:9.02:89,9,0	1/1:17,0:15:3:29,3,0	1/1:28,4:28:5.48:36,5,0	0/1:21,2:21:9.68:22,0,10	1/1:25,1:21:5.66:254,6,0	1/1:29,1:26:12.03:130,12,0	1/1:27,7:30:9.30:103,9,0	1/1:21,0:20:3.43:31,3,0	1/1:20,0:17:11.57:114,12,0	./.	1/1:9,0:8:6.01:59,6,0	0/1:27,0:27:64.76:312,0,65	1/1:25,0:25:12.01:161,12,0	1/1:15,0:15:20.93:249,21,0
chr10	6605275	.	G	GAC	2835.30	PASS	AB=0.982;AC=44;AF=0.815;AN=54;BaseQRankSum=4.392;DP=631;FS=0.000;HRun=0;HaplotypeScore=132.7995;InbreedingCoeff=0.1772;MQ=45.80;MQ0=42;MQRankSum=-2.332;QD=4.84;ReadPosRankSum=5.431;VQSLOD=2.1290;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:40,1:40:0.95:171,1,0	./.	0/0:23,0:16:39.12:0,39,566	0/0:18,0:10:14.74:0,15,165	1/1:29,0:29:5.51:44,6,0	1/1:16,0:16:6.01:57,6,0	1/1:12,4:9:3.01:43,3,0	0/1:25,0:20:54.09:310,0,54	1/1:23,2:22:9.01:86,9,0	1/1:17,0:17:21.82:325,22,0	1/1:19,0:19:6.01:60,6,0	1/1:17,2:17:9.02:107,9,0	1/1:28,1:29:27.07:329,27,0	1/1:13,1:13:15.02:146,15,0	1/1:21,1:20:9.01:87,9,0	1/1:16,2:16:3:27,3,0	1/1:33,0:29:5.93:79,6,0	0/1:25,0:23:3.09:90,0,3	0/1:28,1:24:95.75:248,0,96	1/1:27,3:26:12.02:137,12,0	1/1:21,14:31:8.28:97,8,0	1/1:20,1:20:1.44:27,1,0	1/1:19,3:19:11.59:112,12,0	0/1:22,1:22:0:0,0,0	1/1:8,1:8:6.01:55,6,0	0/1:27,0:27:99:273,0,116	1/1:25,0:25:8.09:28,8,0	0/1:15,0:15:1.05:33,0,1
chr10	6606268	.	A	ACG	11330.65	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=-4.772;DP=793;FS=4.133;HRun=0;HaplotypeScore=213.6016;InbreedingCoeff=0.9726;MQ=51.76;MQ0=16;MQRankSum=5.888;QD=26.05;ReadPosRankSum=5.135;VQSLOD=5.4683;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:35.88:0,36,569	1/1:3,9:12:18.19:247,18,0	0/0:53,0:19:54:0,54,656	0/0:67,0:29:87.22:0,87,1186	1/1:2,17:20:38.56:698,39,0	1/1:2,17:19:38.28:654,38,0	1/1:21,12:33:65.10:931,65,0	0/0:32,0:32:66.50:0,66,494	1/1:14,11:23:21.26:524,21,0	1/1:5,21:26:65.29:1059,65,0	1/1:6,4:10:20.42:319,20,0	0/0:20,0:20:27.04:0,27,273	0/0:24,0:24:30.69:0,31,403	0/0:21,0:21:18.70:0,19,374	1/1:6,18:24:22.90:384,23,0	1/1:1,23:24:32.72:634,33,0	1/1:9,31:40:48.06:1012,48,0	1/1:7,26:32:33.57:877,34,0	1/1:10,0:9:9.01:177,9,0	1/1:18,12:29:56.90:884,57,0	1/1:20,44:63:93.61:1470,94,0	1/1:19,17:32:52.54:809,53,0	0/0:25,0:25:47.14:0,47,494	0/0:33,0:33:58.38:0,58,587	1/1:7,20:26:36.07:652,36,0	0/0:16,0:16:34.59:0,35,278	0/0:17,0:17:21:0,21,185	0/0:9,0:9:5.98:0,6,49
chr10	6606274	.	ACG	A	7286.22	PASS	AB=0.890;AC=50;AF=0.893;AN=56;BaseQRankSum=3.824;DP=795;FS=17.058;HRun=0;HaplotypeScore=233.8593;InbreedingCoeff=0.4598;MQ=52.09;MQ0=17;MQRankSum=1.930;QD=10.89;ReadPosRankSum=2.569;VQSLOD=3.1754;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:16,24:40:62.98:646,63,0	1/1:10,1:11:5.70:64,6,0	0/0:57,0:18:4.43:0,4,479	0/0:69,0:29:62.60:0,63,1039	1/1:25,0:25:30.43:168,30,0	1/1:16,1:17:14.81:108,15,0	1/1:26,6:32:23.74:390,24,0	0/1:29,1:30:6.97:306,0,7	0/1:20,6:24:14.89:169,0,15	1/1:25,2:27:52.51:329,53,0	1/1:10,0:10:13.01:141,13,0	1/1:0,20:20:23.99:323,24,0	1/1:2,18:20:45.01:555,45,0	1/1:0,23:23:45.15:636,45,0	1/1:19,3:22:13.34:143,13,0	1/1:22,1:23:25.94:104,26,0	1/1:35,2:36:25.80:145,26,0	1/1:31,2:32:24.81:200,25,0	1/1:10,2:10:19.27:178,19,0	1/1:31,3:33:29.20:323,29,0	1/1:63,3:64:1.88:170,2,0	1/1:29,5:30:19.76:173,20,0	1/1:8,17:25:9.56:572,10,0	1/1:0,32:32:60.14:828,60,0	1/1:23,3:25:29.39:127,29,0	1/1:16,2:18:38.85:305,39,0	1/1:16,2:18:17.80:138,18,0	1/1:8,0:8:5.97:44,6,0
chr10	6606283	.	CAGACACAG	C	2683	PASS	AB=1.000;AC=12;AF=0.214;AN=56;BaseQRankSum=-8.854;DP=830;FS=59.887;HRun=0;HaplotypeScore=340.9369;InbreedingCoeff=0.5395;MQ=54.68;MQ0=14;MQRankSum=-3.556;QD=15.16;ReadPosRankSum=-5.538;VQSLOD=-0.0886;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:41:37.69:0,38,491	0/0:12,0:12:27.61:0,28,544	0/0:57,0:18:30.39:0,30,880	0/0:66,0:28:31.09:0,31,1898	0/0:25,0:25:49.41:0,49,1179	0/1:15,0:15:5.81:6,0,901	0/1:32,0:32:56:56,0,890	1/1:4,30:34:76.36:986,76,0	0/0:32,0:30:61.24:0,61,1220	0/0:33,0:34:29.46:0,29,1509	0/0:11,0:11:11.53:0,12,465	0/0:21,0:23:36.02:0,36,527	0/0:16,0:20:20.29:0,20,628	0/0:23,0:24:50.60:0,51,854	0/0:23,0:23:23.69:0,24,707	0/0:22,0:22:44.77:0,45,1105	0/0:34,0:33:60.58:0,61,1654	0/1:33,0:32:18:18,0,1289	0/1:10,0:7:35.04:35,0,77	0/0:37,0:37:18.18:0,18,1628	0/0:65,0:63:99:0,123,3162	0/0:35,0:31:47.59:0,48,1154	0/0:25,0:26:53.42:0,53,999	0/0:29,0:32:60.02:0,60,1105	0/0:33,0:32:61.44:0,61,1243	1/1:2,21:23:35.31:1139,35,0	1/1:3,18:21:20.65:522,21,0	1/1:0,9:9:3.01:87,3,0
chr10	6607219	.	TCA	T	5456.29	PASS	AB=0.636;AC=49;AF=0.875;AN=56;BaseQRankSum=8.383;DP=780;FS=0.974;HRun=0;HaplotypeScore=269.9499;InbreedingCoeff=0.4376;MQ=50.39;MQ0=11;MQRankSum=-0.030;QD=8.10;ReadPosRankSum=7.910;VQSLOD=3.8812;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:26,16:43:17:60,0,17	1/1:4,6:11:11.54:64,12,0	0/0:54,0:30:65.50:0,65,1377	0/0:51,0:28:68.04:0,68,1076	1/1:11,8:19:8.08:159,8,0	1/1:10,17:27:24.07:176,24,0	1/1:12,31:43:19.52:230,20,0	1/1:17,8:25:10.81:240,11,0	1/1:14,10:25:32.94:258,33,0	1/1:13,16:29:17.12:388,17,0	1/1:5,5:10:5.14:25,5,0	1/1:32,0:32:37.40:373,37,0	1/1:28,0:28:13.76:218,14,0	1/1:39,1:40:81.37:622,81,0	0/1:9,9:19:2.67:107,0,3	1/1:2,15:22:18.90:156,19,0	0/1:4,10:26:18.48:162,0,18	1/1:13,6:19:12.82:123,13,0	1/1:9,3:12:23.42:157,23,0	1/1:8,11:19:11.74:98,12,0	1/1:42,12:53:2.76:77,3,0	1/1:7,16:23:19.73:150,20,0	1/1:21,2:23:19.44:257,19,0	1/1:27,2:29:34.69:368,35,0	1/1:12,19:32:33.56:239,34,0	1/1:17,18:38:37.08:477,37,0	1/1:6,11:18:24.82:163,25,0	1/1:1,5:6:11.98:111,12,0
chr10	6607223	.	GCA	G	5321.21	PASS	AB=0.706;AC=48;AF=0.857;AN=56;BaseQRankSum=8.385;DP=745;FS=0.481;HRun=0;HaplotypeScore=266.6123;InbreedingCoeff=0.4264;MQ=50.03;MQ0=11;MQRankSum=-0.838;QD=8.28;ReadPosRankSum=8.185;VQSLOD=3.4198;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:27,16:42:17.13:62,0,17	1/1:5,6:11:14.42:76,14,0	0/0:51,0:28:77.53:0,78,1148	0/0:48,0:27:64.28:0,64,927	0/1:7,7:15:1.02:85,0,1	1/1:10,16:27:30.23:204,30,0	1/1:12,31:43:17.39:229,17,0	1/1:17,8:25:23.22:307,23,0	1/1:11,10:21:28.26:225,28,0	1/1:11,16:27:30.31:403,30,0	1/1:1,10:11:5.14:25,5,0	1/1:31,0:31:34.10:347,34,0	1/1:28,0:28:14.34:214,14,0	1/1:37,1:38:77.54:577,78,0	0/1:7,9:17:16.86:104,0,17	1/1:6,15:22:24.21:164,24,0	1/1:16,10:26:17.34:208,17,0	1/1:14,6:20:15.56:126,16,0	1/1:7,3:10:20.88:137,21,0	1/1:7,11:18:14.38:123,14,0	0/1:40,12:51:7.33:77,0,7	1/1:4,16:20:19.31:150,19,0	1/1:20,1:21:16.16:233,16,0	1/1:28,1:29:30.16:320,30,0	1/1:9,20:29:26.73:196,27,0	1/1:18,18:35:40.60:447,41,0	1/1:6,11:17:21.92:175,22,0	1/1:1,5:6:11.98:111,12,0
chr10	6607225	.	ACG	A	7469.03	PASS	AB=1.000;AC=49;AF=0.875;AN=56;BaseQRankSum=6.956;DP=760;FS=0.507;HRun=0;HaplotypeScore=265.9328;InbreedingCoeff=0.4255;MQ=48.77;MQ0=11;MQRankSum=0.299;QD=11.25;ReadPosRankSum=8.577;VQSLOD=3.5602;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:45,0:44:13.77:213,14,0	1/1:10,0:11:17.42:113,17,0	0/0:44,0:25:34.11:0,34,783	0/0:50,0:28:38.98:0,39,616	1/1:15,0:16:14.85:97,15,0	1/1:27,1:28:35.35:250,35,0	1/1:44,0:44:34.64:222,35,0	1/1:31,0:31:1:338,1,0	1/1:23,0:23:34.01:218,34,0	1/1:27,0:27:41.24:395,41,0	0/1:12,0:12:13.41:33,0,13	1/1:2,29:31:51.17:778,51,0	1/1:0,26:26:33.53:466,34,0	1/1:1,34:35:78.20:1160,78,0	0/1:17,0:17:1.56:89,0,2	1/1:24,0:24:13.89:120,14,0	1/1:28,0:28:7.20:181,7,0	1/1:20,0:20:16.86:167,17,0	1/1:12,0:11:17.65:175,18,0	1/1:17,0:17:15.14:118,15,0	0/1:57,0:56:13.64:123,0,14	1/1:21,0:21:0.56:121,1,0	1/1:3,17:20:33.11:493,33,0	1/1:4,26:30:50.87:754,51,0	1/1:30,0:30:12.42:179,12,0	1/1:35,0:34:27.40:436,27,0	1/1:18,0:18:22.27:149,22,0	1/1:6,0:6:11.79:80,12,0
chr10	6608000	.	CACGT	C	2926.73	PASS	AB=0.509;AC=17;AF=0.304;AN=56;BaseQRankSum=5.698;DP=594;FS=1.135;HRun=0;HaplotypeScore=158.3918;InbreedingCoeff=0.7652;MQ=62.22;MQ0=4;MQRankSum=-1.510;QD=16.82;ReadPosRankSum=3.129;VQSLOD=3.4334;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:51.17:0,51,1316	0/0:11,0:11:16.98:0,17,335	0/0:32,0:20:35.39:0,35,484	0/0:27,0:11:13.24:0,13,223	0/0:16,0:16:24.55:0,25,602	1/1:1,15:16:15.05:314,15,0	1/1:0,30:30:9.03:179,9,0	0/0:19,0:19:48.13:0,48,1080	1/1:0,20:20:18.53:376,19,0	0/0:35,0:35:96.29:0,96,2409	0/0:17,0:17:39.11:0,39,884	0/0:19,0:19:48.08:0,48,742	0/0:23,0:23:29.31:0,29,494	0/0:29,0:29:62.55:0,63,1160	1/1:4,11:15:12.03:195,12,0	1/1:3,4:6:12.04:210,12,0	1/1:0,20:20:30.10:611,30,0	0/0:25,0:24:69.19:0,69,1803	1/1:1,14:15:42.09:713,42,0	0/1:0,14:13:20.11:115,0,20	0/0:43,0:43:87.30:0,87,2420	0/1:1,17:18:5.07:117,0,5	0/0:22,0:22:20.92:0,21,496	0/0:32,0:32:29.94:0,30,611	0/1:1,18:19:3.74:294,0,4	0/0:20,0:20:60.19:0,60,1579	0/0:9,0:9:27.09:0,27,728	0/0:17,0:17:51.17:0,51,1327
chr10	6608019	.	GTACACACA	G	799.98	PASS	AB=0.953;AC=10;AF=0.179;AN=56;BaseQRankSum=3.744;DP=570;FS=3.784;HRun=0;HaplotypeScore=189.5762;InbreedingCoeff=-0.0300;MQ=51.81;MQ0=6;MQRankSum=-4.465;QD=4.42;ReadPosRankSum=3.414;VQSLOD=1.9209;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:50.19:0,50,625	0/1:14,0:14:36.97:54,0,37	0/0:16,0:7:11.38:0,11,62	0/0:24,0:8:1.36:0,1,4	0/1:12,1:13:9.05:9,0,61	0/0:16,0:16:20.94:0,21,234	0/0:31,0:30:19.01:0,19,321	0/0:21,0:21:50.87:0,51,1025	0/0:18,0:18:25.04:0,25,307	0/1:25,0:25:99:330,0,232	0/0:13,0:13:17.69:0,18,142	0/1:16,0:16:38.74:39,0,68	0/1:9,0:16:13.06:156,0,13	0/1:24,0:24:26.94:200,0,27	0/0:19,0:19:8.73:0,9,113	0/0:10,0:9:6.47:0,6,54	0/0:18,0:18:36.26:0,36,425	0/1:23,0:22:80.60:81,0,218	0/0:23,0:22:61.39:0,61,1029	0/0:23,0:22:26.66:0,27,433	0/0:38,0:38:35.49:0,35,317	0/0:21,0:22:14.68:0,15,269	1/1:7,11:18:2.67:18,3,0	0/1:32,0:32:18.11:53,0,18	0/0:16,0:16:26.97:0,27,346	0/0:20,0:20:60.14:0,60,1515	0/0:9,0:9:18.86:0,19,449	0/0:18,0:18:54.06:0,54,1478
chr10	6608020	.	TACACACACAC	T	1113.78	PASS	AB=0.680;AC=14;AF=0.259;AN=54;BaseQRankSum=2.568;DP=593;FS=4.070;HRun=0;HaplotypeScore=206.3050;InbreedingCoeff=0.4604;MQ=48.81;MQ0=6;MQRankSum=-3.453;QD=5.57;ReadPosRankSum=3.146;VQSLOD=2.4521;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:31:39.60:0,40,695	1/1:2,3:14:3:30,3,0	./.	0/0:22,0:7:0.47:0,0,1	1/1:4,8:13:2.65:72,3,0	0/0:18,0:17:6.91:0,7,176	0/0:34,0:35:20.25:0,20,582	0/0:23,0:24:46.29:0,46,1453	0/0:19,0:20:15.05:0,15,275	0/1:10,14:25:6.38:847,0,6	0/0:7,6:13:0.01:0,0,0	0/0:9,0:15:6.80:0,7,90	0/1:9,0:16:0.52:1,0,35	0/1:9,0:24:11.79:18,0,12	0/0:15,0:23:6.49:0,6,88	0/0:11,0:14:3.01:0,3,30	0/0:16,0:18:21.54:0,22,527	1/1:13,6:21:12.03:259,12,0	0/0:24,0:23:34.89:0,35,1105	0/0:24,0:25:20.48:0,20,573	0/1:26,10:35:0:0,0,0	0/0:21,0:23:14.69:0,15,285	1/1:14,0:18:2.66:17,3,0	1/1:25,0:32:0.96:3,1,0	0/0:18,0:19:14.98:0,15,351	0/0:17,0:19:42.14:0,42,1545	0/0:9,0:9:9.03:0,9,413	0/0:18,0:18:36.12:0,36,1583
chr10	6610234	.	A	AGTGTGG	47585.01	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=1.623;DP=1162;FS=1.261;HRun=0;HaplotypeScore=347.2071;InbreedingCoeff=0.9914;MQ=53.23;MQ0=2;MQRankSum=-9.709;QD=43.78;ReadPosRankSum=5.286;VQSLOD=4.0664;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:26,20:46:84.12:2356,84,0	1/1:3,13:16:30.10:953,30,0	0/0:34,0:32:49.08:0,49,967	0/0:41,0:40:49.37:0,49,1050	1/1:8,30:39:69.24:2267,69,0	1/1:9,19:28:45.11:1445,45,0	1/1:11,21:36:27.09:915,27,0	1/1:30,6:36:43.34:1050,43,0	1/1:11,51:65:99:4054,120,0	1/1:22,45:70:99:3963,141,0	1/1:6,26:32:57.20:1903,57,0	1/1:43,0:43:33.11:711,33,0	1/1:62,0:62:54.18:1426,54,0	1/1:42,0:42:39.13:836,39,0	1/1:12,57:75:99:4662,141,0	1/1:9,54:65:99:3856,114,0	1/1:19,6:25:45.94:1080,46,0	1/1:14,1:15:18.98:404,19,0	1/1:6,16:25:57.11:1538,57,0	1/1:11,31:46:84.03:2356,84,0	1/1:47,10:57:65.27:2195,65,0	1/1:14,40:56:92.78:3048,93,0	1/1:30,0:30:36.95:815,37,0	1/1:36,0:37:24.06:581,24,0	1/1:7,34:43:65.82:2238,66,0	1/1:43,0:44:87.34:1862,87,0	1/1:37,0:35:20.94:499,21,0	1/1:16,0:16:24.08:574,24,0
chr10	6610240	.	G	GGTGTGGGTGTGTATAAGT	47102.87	PASS	AB=0.999;AC=35;AF=0.625;AN=56;BaseQRankSum=-15.085;DP=1226;FS=2.071;HRun=0;HaplotypeScore=596.2542;InbreedingCoeff=-0.2844;MQ=53.25;MQ0=2;MQRankSum=-8.397;QD=40.85;ReadPosRankSum=-4.715;VQSLOD=0.1890;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:47,0:47:99:381,0,612	0/1:15,0:15:5.94:373,0,6	0/0:37,0:35:57.34:0,57,2255	0/0:36,0:35:59.60:0,60,2361	0/1:38,0:39:99:611,0,161	0/1:26,0:25:99:181,0,243	0/1:38,0:38:99:526,0,277	1/1:53,0:53:99:5796,138,0	0/1:64,0:64:99:376,0,320	0/1:66,0:66:99:1139,0,726	0/1:31,0:31:19.67:557,0,20	1/1:24,26:57:93.32:4771,93,0	1/1:17,39:64:87.77:6001,88,0	1/1:14,28:48:72.20:4608,72,0	0/1:79,0:79:99:1059,0,391	0/1:64,0:64:99:715,0,246	0/1:25,0:25:99:229,0,432	0/1:17,0:17:99:163,0,246	0/1:27,0:27:99:490,0,334	0/1:42,0:42:99:411,0,629	0/1:57,0:57:99:681,0,190	0/1:56,0:56:99:691,0,197	1/1:14,21:36:56.88:3175,57,0	1/1:10,23:40:33.64:1817,34,0	0/1:44,0:44:99:411,0,224	1/1:16,27:55:99:6799,145,0	1/1:16,23:46:54.18:2945,54,0	1/1:3,11:16:27.09:2198,27,0
chr10	6610650	.	CG	C	9257.56	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=11.401;DP=1243;FS=3.857;HRun=1;HaplotypeScore=176.9595;InbreedingCoeff=1.0000;MQ=68.73;MQ0=0;MQRankSum=-0.362;QD=38.41;ReadPosRankSum=5.528;VQSLOD=4.1490;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:58:99:0,163,2563	0/0:24,0:24:68.82:0,69,1058	0/0:44,0:44:99:0,132,1923	0/0:55,0:53:99:0,152,2179	0/0:33,0:33:93.32:0,93,1470	0/0:34,0:34:99:0,99,1561	0/0:34,0:34:98.99:0,99,1489	0/0:57,0:57:99:0,166,2553	0/0:48,0:48:99:0,138,2170	0/0:67,0:67:99:0,193,2983	0/0:30,0:30:72.69:0,73,1188	1/1:0,45:45:99:1719,123,0	1/1:0,52:52:99:2054,147,0	1/1:1,49:50:99:1923,138,0	0/0:71,0:71:99:0,205,3205	0/0:41,0:41:99:0,105,1661	0/0:36,0:36:98.87:0,99,1491	0/0:29,0:29:69.69:0,70,1044	0/0:32,0:32:93.28:0,93,1396	0/0:37,0:37:81.28:0,81,1280	0/0:86,0:86:99:0,244,3820	0/0:41,0:41:99:0,108,1702	1/1:0,40:40:99:1424,102,0	1/1:0,54:53:99:2139,154,0	0/0:39,0:39:99:0,111,1764	0/0:48,0:48:99:0,141,2246	0/0:41,0:41:99:0,120,1869	0/0:17,0:17:51.17:0,51,812
chr10	6610876	.	TG	T	1460.38	PASS	AB=0.874;AC=19;AF=0.339;AN=56;BaseQRankSum=6.772;DP=1045;FS=98.906;HRun=1;HaplotypeScore=407.8043;InbreedingCoeff=-0.5181;MQ=45.59;MQ0=1;MQRankSum=-7.172;QD=1.91;ReadPosRankSum=4.937;VQSLOD=-0.3657;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:27,1:28:12.87:13,0,190	0/1:18,7:25:92.27:92,0,199	0/0:27,0:14:36.53:0,37,500	0/0:33,0:25:53.34:0,53,773	0/1:41,13:55:40.24:47,0,40	0/1:36,3:39:7.98:8,0,283	0/1:20,2:22:21.60:22,0,352	0/0:53,0:53:93.38:0,93,1391	0/1:40,2:42:5.92:6,0,351	0/1:65,12:77:99:207,0,1982	0/1:25,8:33:65.47:142,0,65	0/0:43,1:45:1.08:0,1,377	0/1:45,5:51:99:106,0,322	0/1:32,4:36:15.41:15,0,275	0/0:57,1:58:42.86:0,43,325	0/1:36,6:42:99:103,0,192	0/0:11,0:11:20.61:0,21,264	0/0:9,0:9:23.86:0,24,310	0/1:24,3:27:54.80:55,0,415	0/1:36,11:47:99:220,0,284	0/0:33,0:33:37.23:0,37,511	0/1:53,5:59:82.74:83,0,168	0/1:25,14:39:53.81:279,0,54	0/0:12,1:13:6.95:0,7,179	0/1:41,2:43:25.71:26,0,338	0/1:33,8:42:99:122,0,1137	0/1:26,5:31:59.19:59,0,543	0/1:23,2:25:10.63:11,0,685
chr10	6610991	.	CA	C	1712.69	PASS	AB=0.837;AC=23;AF=0.411;AN=56;BaseQRankSum=13.246;DP=566;FS=156.074;HRun=2;HaplotypeScore=162.3341;InbreedingCoeff=-0.6749;MQ=45.81;MQ0=6;MQRankSum=-6.325;QD=3.52;ReadPosRankSum=9.774;VQSLOD=0.3114;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:18,2:19:41.69:42,0,54	0/1:12,2:14:19.04:19,0,59	0/0:10,0:5:21.52:0,22,294	0/0:10,0:5:13.46:0,13,149	0/1:16,6:22:99:118,0,127	0/1:8,2:10:37.09:37,0,88	0/1:22,2:24:11.02:11,0,165	0/1:17,14:31:99:347,0,665	0/1:17,4:19:94.90:95,0,109	0/1:27,6:33:91.30:91,0,1113	0/1:9,6:15:78.26:78,0,81	0/1:38,5:43:80.99:81,0,313	0/1:20,2:22:25.21:25,0,167	0/1:24,3:27:57.61:58,0,95	0/1:18,3:20:55.49:55,0,128	0/1:10,2:12:31.65:32,0,150	0/1:14,1:14:5.79:6,0,142	0/1:9,1:10:5.08:5,0,266	0/0:17,1:18:17.70:0,18,727	0/1:15,7:22:97.78:156,0,98	0/0:24,0:24:38.77:0,39,434	0/1:21,12:33:99:226,0,124	0/1:11,7:18:54.73:112,0,55	0/0:16,2:17:14.56:0,15,132	0/1:20,4:23:79.64:80,0,216	0/1:20,4:24:56.56:57,0,784	0/1:12,4:16:98.79:99,0,174	0/1:7,2:9:41.16:41,0,180
chr10	6610997	.	C	CA	2076.44	PASS	AB=0.865;AC=23;AF=0.411;AN=56;BaseQRankSum=14.724;DP=696;FS=99.669;HRun=1;HaplotypeScore=194.8528;InbreedingCoeff=-0.6812;MQ=46.59;MQ0=6;MQRankSum=-5.087;QD=3.47;ReadPosRankSum=7.091;VQSLOD=-0.4062;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:23,2:24:34.64:35,0,386	0/1:17,2:19:16.15:16,0,212	0/0:13,0:8:24.53:0,25,290	0/0:12,0:7:9.83:0,10,138	0/1:22,6:28:99:152,0,290	0/1:15,2:17:40.83:41,0,281	0/1:27,2:29:9.28:9,0,283	0/1:27,14:41:99:441,0,709	0/1:19,4:21:80.23:80,0,383	0/1:40,6:46:99:111,0,1176	0/1:16,6:22:99:118,0,128	0/1:41,5:46:68.56:69,0,1051	0/1:23,2:25:24.74:25,0,459	0/1:26,3:29:54.51:55,0,456	0/1:21,3:23:69.27:69,0,313	0/1:13,2:15:38.28:38,0,317	0/1:18,1:18:4.37:4,0,318	0/1:12,1:13:12.77:13,0,248	0/0:22,1:23:21.44:0,21,693	0/1:20,7:27:99:196,0,301	0/0:28,0:28:43.05:0,43,585	0/1:28,12:40:99:310,0,465	0/1:15,7:22:99:133,0,125	0/0:20,2:21:14.16:0,14,226	0/1:23,4:26:77.31:77,0,419	0/1:28,4:32:72.53:73,0,791	0/1:13,4:16:99:115,0,347	0/1:10,2:12:52.43:52,0,244
chr10	6611006	.	G	GCA	4588.20	PASS	AB=0.884;AC=24;AF=0.429;AN=56;BaseQRankSum=14.481;DP=823;FS=153.048;HRun=0;HaplotypeScore=229.6654;InbreedingCoeff=-0.7498;MQ=50.06;MQ0=6;MQRankSum=-8.024;QD=6.31;ReadPosRankSum=3.588;VQSLOD=1.5247;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:27,2:28:74.40:74,0,594	0/1:16,2:18:40.32:40,0,272	0/0:19,0:14:43.74:0,44,595	0/0:18,0:11:20.94:0,21,286	0/1:24,6:30:99:312,0,438	0/1:23,2:25:85.54:86,0,453	0/1:33,2:35:80.53:81,0,545	0/1:39,14:53:99:661,0,1194	0/1:29,3:30:99:140,0,495	0/1:42,7:49:99:347,0,1474	0/1:24,6:30:99:299,0,345	0/1:50,5:55:99:194,0,1398	0/1:33,2:35:71.11:71,0,681	0/1:31,3:34:99:135,0,558	0/1:31,3:33:99:181,0,401	0/1:23,2:25:82.41:82,0,455	0/1:22,1:22:22.59:23,0,544	0/1:14,1:15:23.29:23,0,468	0/0:26,0:25:64.71:0,65,916	0/1:23,7:30:99:373,0,435	0/0:33,0:33:56.71:0,57,929	0/1:30,12:42:99:624,0,697	0/1:14,7:21:99:244,0,212	0/1:20,2:21:26.99:27,0,315	0/1:22,3:24:99:138,0,541	0/1:29,4:33:99:147,0,1103	0/1:16,4:19:99:192,0,545	0/1:10,2:12:94.44:94,0,286
chr10	6611208	.	GA	G	2182.51	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=6.210;DP=606;FS=4.066;HRun=7;HaplotypeScore=67.9738;InbreedingCoeff=0.9935;MQ=69.16;MQ0=0;MQRankSum=0.231;QD=24.25;ReadPosRankSum=-1.672;VQSLOD=3.3739;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:57.18:0,57,717	0/0:12,0:12:24.08:0,24,302	0/0:11,0:11:27.07:0,27,307	0/0:13,0:13:21.02:0,21,229	0/0:28,0:28:69.18:0,69,849	0/0:29,0:29:78.25:0,78,981	0/0:22,0:22:60.18:0,60,741	1/1:3,22:25:66.13:666,66,0	0/0:17,0:17:51.16:0,51,630	0/0:25,0:25:69.20:0,69,852	0/0:17,0:17:48.15:0,48,604	0/0:33,0:33:84.27:0,84,1056	0/0:21,0:21:54.13:0,54,661	0/0:25,0:25:63.19:0,63,781	0/0:15,0:15:42.13:0,42,528	0/0:12,0:12:36.12:0,36,453	0/0:25,0:25:69.20:0,69,854	0/0:16,0:16:48.14:0,48,590	0/0:24,0:24:69.21:0,69,857	0/0:31,0:31:87.19:0,87,1058	0/0:14,0:14:36.05:0,36,421	0/0:33,0:33:84.27:0,84,1052	0/0:29,0:29:78.25:0,78,981	0/0:25,0:25:66.19:0,66,816	0/0:17,0:17:45.10:0,45,548	1/1:5,25:30:40.43:727,40,0	1/1:3,27:30:78.18:795,78,0	1/1:0,5:5:15.03:153,15,0
chr10	6613229	.	T	TTCTCTCTCTC	541.95	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=2.450;DP=671;FS=31.509;HRun=0;HaplotypeScore=239.6461;InbreedingCoeff=0.7296;MQ=64.34;MQ0=15;MQRankSum=-3.262;QD=4.11;ReadPosRankSum=-3.274;VQSLOD=1.1171;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:14,26:49:14.63:448,15,0	0/0:16,0:15:25.33:0,25,725	0/0:28,0:18:48.13:0,48,1411	0/0:32,0:21:54.18:0,54,1496	0/0:24,0:24:35.96:0,36,1079	0/0:16,0:16:32.70:0,33,714	0/0:30,0:30:66.21:0,66,1914	0/0:21,0:21:57.15:0,57,1696	0/0:22,0:22:50.87:0,51,1239	0/0:18,0:18:37.01:0,37,1092	0/0:13,0:12:29.43:0,29,624	1/1:20,0:18:6.43:45,6,0	0/1:20,0:20:22.05:63,0,22	1/1:24,0:23:11.77:89,12,0	0/0:26,0:26:54.74:0,55,1460	0/0:22,0:22:63.22:0,63,1836	0/0:29,0:28:57.13:0,57,1482	0/0:16,0:15:39.13:0,39,1146	0/0:15,0:14:33.07:0,33,866	0/0:27,0:27:44.55:0,45,1289	0/0:27,0:25:40.95:0,41,1220	0/0:25,0:25:41.80:0,42,1009	1/1:19,0:18:2.98:41,3,0	0/0:41,0:41:4.19:0,4,87	0/0:27,0:26:39.12:0,39,1055	0/0:28,0:26:75.17:0,75,1968	0/0:31,0:30:78.21:0,78,2133	0/0:5,0:5:9.03:0,9,294
chr10	6613231	.	CTGTGTGTGTGTGTG	C	9609.54	PASS	AB=0.780;AC=31;AF=0.596;AN=52;BaseQRankSum=0.157;DP=672;FS=7.623;HRun=0;HaplotypeScore=229.6461;InbreedingCoeff=0.7725;MQ=63.46;MQ0=17;MQRankSum=-4.843;QD=27.38;ReadPosRankSum=0.725;VQSLOD=3.0570;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:5.32:0,5,110	1/1:11,5:15:12.01:320,12,0	./.	./.	1/1:12,12:24:21.07:496,21,0	1/1:12,3:15:6.02:235,6,0	0/1:23,9:32:8.92:373,0,9	0/0:21,0:21:21.07:0,21,588	1/1:10,11:22:30.10:1044,30,0	1/1:12,5:17:12.90:373,13,0	1/1:4,9:12:21.07:822,21,0	0/0:3,0:22:8.32:0,8,314	0/0:2,0:20:15.05:0,15,590	0/0:2,0:25:12.04:0,12,488	1/1:17,9:26:24.08:912,24,0	1/1:14,8:22:30.10:1148,30,0	1/1:19,8:26:18.06:660,18,0	1/1:11,2:16:15.01:452,15,0	1/1:14,2:15:5.56:166,6,0	1/1:16,11:26:21.07:797,21,0	1/1:25,0:24:5.98:94,6,0	1/1:12,9:24:21.07:729,21,0	0/0:4,0:21:3.48:0,3,100	0/0:4,0:43:14.56:0,15,865	1/1:16,10:26:27.09:989,27,0	0/0:23,0:25:39.11:0,39,1384	0/0:18,0:29:39.13:0,39,1616	0/0:5,0:5:3.01:0,3,176
chr10	6615935	.	A	AT	2616.58	PASS	AB=1.000;AC=12;AF=0.214;AN=56;BaseQRankSum=-9.807;DP=597;FS=6.485;HRun=3;HaplotypeScore=114.3843;InbreedingCoeff=0.7714;MQ=75.90;MQ0=3;MQRankSum=0.854;QD=17.92;ReadPosRankSum=2.778;VQSLOD=3.2643;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:77.40:0,77,612	0/0:13,0:13:23.98:0,24,205	0/0:26,0:20:33.34:0,33,320	0/0:23,0:17:4.61:0,5,123	0/0:24,0:24:62.80:0,63,506	0/0:13,0:13:38.96:0,39,328	0/0:18,0:18:41.97:0,42,356	0/1:25,0:25:3.93:4,0,142	0/0:16,0:16:38.94:0,39,324	0/0:31,0:30:74.88:0,75,635	0/0:28,0:28:77.81:0,78,642	1/1:4,18:22:25.74:599,26,0	1/1:8,13:21:49.69:622,50,0	1/1:4,12:16:31.56:424,32,0	0/0:29,0:29:71.79:0,72,590	0/0:20,0:20:53.97:0,54,462	0/0:22,0:22:56.93:0,57,476	0/0:23,0:22:56.88:0,57,469	0/0:22,0:22:56.85:0,57,461	0/0:31,0:31:89.77:0,90,743	0/0:20,0:20:53.91:0,54,446	0/0:17,0:16:38.87:0,39,318	1/1:2,16:18:24.03:303,24,0	1/1:11,16:27:67.97:823,68,0	0/0:14,0:14:32.99:0,33,283	0/0:24,0:24:16.02:0,16,187	0/1:17,0:16:7.79:18,0,8	0/0:6,0:6:2.37:0,2,37
chr10	6615938	.	TAA	T	7075.45	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-11.299;DP=593;FS=14.155;HRun=13;HaplotypeScore=99.8375;InbreedingCoeff=0.9912;MQ=75.34;MQ0=3;MQRankSum=-1.379;QD=19.76;ReadPosRankSum=4.236;VQSLOD=2.6340;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,0:29:65.33:282,65,0	1/1:1,10:11:21.03:204,21,0	0/0:28,0:20:28.67:0,29,401	0/0:27,0:17:16.33:0,16,111	1/1:3,19:23:41.87:455,42,0	1/1:0,13:13:39.06:378,39,0	1/1:2,15:18:26.96:312,27,0	0/0:10,0:31:81.16:0,81,852	1/1:0,12:13:38.80:361,39,0	1/1:6,18:25:38.88:477,39,0	1/1:5,20:27:56.74:584,57,0	0/0:23,0:23:60.13:0,60,644	0/0:18,0:19:54.12:0,54,592	0/0:15,0:16:42.08:0,42,450	1/1:3,28:31:69.04:665,69,0	1/1:3,17:20:45.06:436,45,0	1/1:5,16:21:42.02:407,42,0	1/1:2,20:22:53.81:505,54,0	1/1:5,15:21:15.81:406,16,0	1/1:3,27:31:80.78:759,81,0	1/1:3,17:20:45.05:436,45,0	1/1:4,11:14:23.97:233,24,0	0/0:14,0:15:21.36:0,21,215	0/0:22,0:25:68.69:0,69,704	1/1:5,10:15:17.99:175,18,0	0/0:7,0:21:48.09:0,48,482	0/0:2,0:21:42.07:0,42,407	0/0:2,0:7:15.02:0,15,149
chr10	6616934	.	AAATCT	A	1215.65	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.431;DP=670;FS=5.742;HRun=0;HaplotypeScore=119.7250;InbreedingCoeff=0.9919;MQ=84.99;MQ0=0;MQRankSum=-5.363;QD=43.42;ReadPosRankSum=-1.241;VQSLOD=2.8331;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,26:28:63.21:1311,63,0	0/0:14,0:14:39.13:0,39,1234	0/0:24,0:23:63.22:0,63,1794	0/0:22,0:21:56.44:0,56,1590	0/0:12,0:12:36.12:0,36,1114	0/0:28,0:28:84.29:0,84,2642	0/0:26,0:26:78.27:0,78,2233	0/0:22,0:22:66.22:0,66,1913	0/0:24,0:24:72.22:0,72,2128	0/0:29,0:29:87.30:0,87,2691	0/0:18,0:18:54.19:0,54,1698	0/0:34,0:34:99:0,99,3013	0/0:26,0:26:78.27:0,78,2397	0/0:40,0:40:99:0,120,3599	0/0:23,0:23:69.24:0,69,2136	0/0:17,0:17:51.18:0,51,1583	0/0:29,0:29:87.27:0,87,2675	0/0:29,0:29:84.23:0,84,2486	0/0:23,0:23:69.24:0,69,2126	0/0:21,0:21:60.19:0,60,1818	0/0:35,0:35:99:0,105,3233	0/0:22,0:22:66.23:0,66,2046	0/0:16,0:16:48.16:0,48,1494	0/0:30,0:30:90.31:0,90,2809	0/0:27,0:27:81.28:0,81,2553	0/0:25,0:25:69.24:0,69,2141	0/0:20,0:20:60.18:0,60,1829	0/0:6,0:6:18.06:0,18,571
chr10	6617443	.	ACCAC	A	2115.47	PASS	AB=0.981;AC=27;AF=0.500;AN=54;BaseQRankSum=-0.077;DP=439;FS=0.558;HRun=0;HaplotypeScore=110.0145;InbreedingCoeff=0.6300;MQ=66.50;MQ0=8;MQRankSum=-0.659;QD=11.50;ReadPosRankSum=-0.956;VQSLOD=3.1127;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:16,0:19:17.45:92,0,17	1/1:6,0:6:6.02:117,6,0	0/0:35,0:21:49.69:0,50,991	0/0:35,0:23:39.14:0,39,1011	1/1:8,2:11:9.02:112,9,0	1/1:11,1:12:3.08:65,3,0	1/1:12,3:15:20.73:354,21,0	0/0:32,0:32:84.29:0,84,2093	1/1:5,6:11:2.96:19,3,0	0/1:5,0:5:3.99:19,0,4	./.	0/0:19,0:19:21.02:0,21,321	0/0:17,0:18:23.95:0,24,440	0/0:21,0:21:31.29:0,31,510	1/1:12,1:13:12.30:262,12,0	0/1:10,0:10:3.24:104,0,3	1/1:10,2:13:9.26:274,9,0	1/1:7,3:11:16.91:327,17,0	0/1:6,0:5:2.25:36,0,2	1/1:7,3:11:11.32:156,11,0	1/1:12,2:15:20.70:255,21,0	0/0:2,7:9:0:0,0,0	0/1:11,0:11:0.01:0,0,0	0/0:32,0:30:26.98:0,27,366	1/1:11,1:12:11.60:111,12,0	0/0:16,0:16:42.10:0,42,1051	0/0:22,0:22:66.22:0,66,1516	0/0:10,0:10:30.02:0,30,560
chr10	6617444	.	C	CA	1876.40	PASS	AB=1.000;AC=31;AF=0.574;AN=54;BaseQRankSum=5.159;DP=440;FS=1.700;HRun=1;HaplotypeScore=102.0989;InbreedingCoeff=0.8554;MQ=66.46;MQ0=8;MQRankSum=-3.679;QD=10.14;ReadPosRankSum=-1.655;VQSLOD=0.8424;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,10:19:20.82:191,21,0	1/1:2,4:6:6:50,6,0	0/0:37,0:22:43.39:0,43,636	0/0:34,0:23:38.65:0,39,612	1/1:8,3:11:9.03:116,9,0	1/1:5,7:12:9.03:112,9,0	1/1:9,8:16:23.13:194,23,0	0/0:31,0:31:84.28:0,84,1168	1/1:6,5:11:3.01:43,3,0	1/1:3,1:4:9.02:94,9,0	./.	0/0:20,0:19:21.01:0,21,210	0/0:17,0:17:23.86:0,24,252	0/0:20,0:20:29.73:0,30,288	1/1:6,6:12:19.53:239,20,0	1/1:3,7:10:11.92:128,12,0	1/1:9,5:14:25.72:207,26,0	1/1:8,4:12:32.15:248,32,0	1/1:4,2:5:13.45:83,13,0	1/1:9,2:11:14.29:132,14,0	1/1:15,3:16:15.04:196,15,0	0/0:7,2:9:0:0,0,0	0/1:11,0:11:0:0,0,0	0/0:32,0:30:21.83:0,22,238	1/1:7,4:11:7.35:44,7,0	0/0:16,0:16:42.12:0,42,587	0/0:23,0:23:66.21:0,66,902	0/0:10,0:10:30.02:0,30,345
chr10	6617446	.	AC	A	1207.51	PASS	AB=1.000;AC=32;AF=0.593;AN=54;BaseQRankSum=4.602;DP=460;FS=4.040;HRun=2;HaplotypeScore=106.0334;InbreedingCoeff=0.7917;MQ=64.08;MQ0=8;MQRankSum=-1.854;QD=5.27;ReadPosRankSum=-1.979;VQSLOD=0.0012;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:18,3:21:12.99:85,13,0	1/1:6,0:6:6:51,6,0	0/0:36,0:19:43.84:0,44,522	0/0:35,0:23:47.05:0,47,590	1/1:9,1:10:5.60:40,6,0	1/1:11,1:12:6.05:34,6,0	1/1:16,2:17:25.59:194,26,0	0/0:35,0:35:90.25:0,90,1165	1/1:10,1:11:2.98:22,3,0	1/1:7,0:7:9.92:66,10,0	./.	0/0:21,0:20:18.91:0,19,123	0/0:19,0:19:22.51:0,23,148	0/0:21,0:21:25.55:0,26,139	1/1:10,1:11:15.06:100,15,0	1/1:9,1:10:11.68:77,12,0	1/1:14,1:15:25.54:140,26,0	1/1:11,1:12:32:213,32,0	1/1:8,0:7:15.12:110,15,0	1/1:10,1:11:11.32:70,11,0	1/1:19,3:20:12.15:146,12,0	0/0:10,0:10:0:0,0,0	0/1:11,0:11:0:0,0,0	0/1:34,0:32:0.15:0,0,45	1/1:9,1:10:6.83:55,7,0	0/0:18,0:18:45.05:0,45,577	0/0:24,0:24:65.41:0,65,860	0/0:6,0:6:17.27:0,17,231
chr10	6617447	.	C	CCCACA	5035.80	PASS	AB=0.768;AC=37;AF=0.685;AN=54;BaseQRankSum=7.133;DP=578;FS=6.441;HRun=0;HaplotypeScore=185.1596;InbreedingCoeff=0.4929;MQ=57.28;MQ0=8;MQRankSum=-7.244;QD=11.96;ReadPosRankSum=1.522;VQSLOD=3.8936;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:32:12.41:212,12,0	1/1:8,0:12:8.01:182,8,0	0/0:37,0:18:26.82:0,27,452	0/0:35,0:22:34.75:0,35,596	1/1:9,0:13:0.37:4,0,0	1/1:17,0:22:21.72:400,22,0	1/1:18,0:24:2.82:145,3,0	0/0:35,0:35:87.11:0,87,1263	1/1:16,0:20:16.30:302,16,0	1/1:10,0:11:27:449,27,0	./.	0/1:4,1:21:20.01:290,0,20	0/1:2,1:21:47.84:291,0,48	1/1:3,0:24:23.37:467,23,0	1/1:15,0:20:8.04:259,8,0	1/1:6,0:13:12.32:307,12,0	1/1:18,0:22:16.62:470,17,0	1/1:12,0:16:20.33:315,20,0	1/1:9,0:10:24.94:332,25,0	1/1:13,0:15:2.03:132,2,0	0/1:24,0:26:6.98:129,0,7	0/1:14,0:16:0.19:0,0,0	0/0:4,0:14:0.27:0,0,0	1/1:4,1:39:14.84:243,15,0	1/1:11,0:15:5.92:99,6,0	0/1:20,0:20:5.54:6,0,516	0/0:22,0:23:66.20:0,66,1053	0/0:5,0:6:18.06:0,18,289
chr10	6617713	.	CA	C	1336.92	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=9.208;DP=649;FS=0.606;HRun=1;HaplotypeScore=73.0285;InbreedingCoeff=0.9977;MQ=88.51;MQ0=0;MQRankSum=-4.268;QD=26.74;ReadPosRankSum=-0.068;VQSLOD=3.3572;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,50:50:99:1432,114,0	0/0:12,0:12:36.12:0,36,565	0/0:25,0:25:75.22:0,75,1122	0/0:24,1:25:56.32:0,56,979	0/0:17,0:17:45.14:0,45,694	0/0:19,0:19:54.17:0,54,834	0/0:28,0:28:84.21:0,84,1264	0/0:24,0:24:72.23:0,72,1108	0/0:28,0:28:84.21:0,84,1265	0/0:26,0:26:78.22:0,78,1199	0/0:17,0:17:48.16:0,48,743	0/0:27,0:27:81.28:0,81,1294	0/0:21,0:21:60.01:0,60,847	0/0:23,0:23:69.24:0,69,1099	0/0:21,0:21:63.15:0,63,975	0/0:22,0:22:63.16:0,63,978	0/0:34,0:34:99:0,102,1595	0/0:20,0:20:57.14:0,57,831	0/0:21,0:21:63.20:0,63,965	0/0:15,0:15:45.14:0,45,696	0/0:44,0:44:99:0,123,1928	0/0:13,0:13:39.13:0,39,622	0/0:18,0:18:51.09:0,51,761	0/0:19,0:19:57.19:0,57,907	0/0:23,0:23:66.23:0,66,1055	0/0:20,0:20:60.17:0,60,928	0/0:29,0:29:84.28:0,84,1341	0/0:8,0:8:24.08:0,24,383
chr10	6617912	.	T	TTCTC	1148.27	PASS	AB=0.979;AC=27;AF=0.540;AN=50;BaseQRankSum=-2.395;DP=561;FS=35.101;HRun=0;HaplotypeScore=127.7603;InbreedingCoeff=0.1091;MQ=59.73;MQ0=13;MQRankSum=-0.617;QD=2.84;ReadPosRankSum=-1.715;VQSLOD=0.8481;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:25:1.44:4,1,0	0/1:8,0:8:0:0,0,0	./.	0/1:36,0:14:0:0,0,0	0/0:16,0:17:2.70:0,3,43	1/1:17,0:16:6.01:75,6,0	1/1:27,0:27:14.47:113,14,0	./.	0/1:20,0:20:32.60:216,0,33	0/0:26,0:26:8:0,8,73	./.	1/1:19,0:19:12.50:181,12,0	1/1:20,0:19:11.90:107,12,0	0/1:18,0:18:0.30:104,0,0	0/0:19,0:19:3.01:0,3,46	0/1:11,0:12:3.03:3,0,107	0/1:18,8:29:29.24:131,0,29	0/1:13,0:13:3.16:3,0,83	0/1:26,0:26:3.95:4,0,125	0/1:11,0:11:0.03:0,0,0	0/0:28,0:28:8.43:0,8,68	0/1:23,0:23:15.66:59,0,16	1/1:11,0:11:3:25,3,0	0/1:31,0:31:12.84:225,0,13	1/1:18,0:18:2.99:23,3,0	0/1:17,0:19:11.72:12,0,45	0/0:10,0:15:14.35:0,14,123	0/1:19,0:19:0:0,0,0
chr10	6619594	.	ACCAAAACAAGAAAT	A	1752.72	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.006;DP=714;FS=1.982;HRun=0;HaplotypeScore=258.4073;InbreedingCoeff=0.9450;MQ=91.67;MQ0=0;MQRankSum=-7.118;QD=36.52;ReadPosRankSum=-1.047;VQSLOD=2.5974;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:3,45:48:54.19:1848,54,0	0/0:12,0:12:33.11:0,33,1993	0/0:36,0:36:99:0,108,5161	0/0:28,0:28:84.12:0,84,3990	0/0:22,0:22:63.20:0,63,3790	0/0:23,0:23:69.24:0,69,4612	0/0:25,0:25:75.26:0,75,4545	0/0:32,0:32:96.32:0,96,5878	0/0:20,0:20:57.20:0,57,3752	0/0:36,0:36:99:0,108,6734	0/0:17,0:17:42.14:0,42,2402	0/0:31,0:31:90.31:0,90,5281	0/0:28,0:28:84.29:0,84,5855	0/0:27,0:27:81.26:0,81,5338	0/0:32,0:32:87.26:0,87,5684	0/0:26,0:26:78.27:0,78,4475	0/0:28,0:28:84.27:0,84,5025	0/0:13,0:13:39.13:0,39,2191	0/0:24,0:24:69.24:0,69,4090	0/0:30,0:30:90.30:0,90,5416	0/0:24,0:24:72.23:0,72,4081	0/0:24,0:24:72.25:0,72,4629	0/0:28,0:28:81.28:0,81,5076	0/0:31,0:31:90.31:0,90,5549	0/0:14,0:14:42.14:0,42,2706	0/0:24,0:24:72.25:0,72,4814	0/0:28,0:27:81.28:0,81,4726	0/0:3,0:3:9.03:0,9,636
chr10	6620766	.	CCTT	C	1124.44	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.851;DP=621;FS=3.729;HRun=0;HaplotypeScore=94.5226;InbreedingCoeff=0.9978;MQ=84.91;MQ0=0;MQRankSum=-4.278;QD=34.07;ReadPosRankSum=2.074;VQSLOD=4.2046;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,32:33:78.27:1219,78,0	0/0:21,0:21:57.20:0,57,1215	0/0:23,0:24:56.85:0,57,1034	0/0:24,0:24:48.16:0,48,899	0/0:17,0:17:51.18:0,51,1100	0/0:15,0:15:42.14:0,42,902	0/0:35,0:35:90.30:0,90,1876	0/0:30,0:30:72.24:0,72,1451	0/0:19,0:19:57.20:0,57,1234	0/0:29,0:29:81.28:0,81,1749	0/0:9,0:9:27.09:0,27,585	0/0:31,0:31:81.28:0,81,1742	0/0:23,0:23:66.21:0,66,1385	0/0:20,0:20:54.19:0,54,1164	0/0:17,0:17:48.16:0,48,1024	0/0:21,0:21:51.17:0,51,1046	0/0:39,0:39:99:0,111,2339	0/0:32,0:32:93.31:0,93,1941	0/0:14,0:14:39.13:0,39,845	0/0:15,0:15:45.14:0,45,884	0/0:30,0:30:78.13:0,78,1672	0/0:16,0:16:48.15:0,48,999	0/0:19,0:19:51.18:0,51,1103	0/0:24,0:24:69.22:0,69,1447	0/0:17,0:17:45.15:0,45,975	0/0:16,0:16:45.15:0,45,964	0/0:22,0:22:60.19:0,60,1221	0/0:9,0:9:27.09:0,27,584
chr10	6621628	.	TACACACACACACACACACACAC	T	1017.38	PASS	AC=8;AF=0.154;AN=52;BaseQRankSum=4.225;DP=521;FS=11.866;HRun=0;HaplotypeScore=245.8997;InbreedingCoeff=0.6873;MQ=69.80;MQ0=16;MQRankSum=-3.394;QD=13.94;ReadPosRankSum=-0.814;VQSLOD=1.1629;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:39:27.08:0,27,2256	0/0:7,0:7:4.69:0,5,556	./.	0/0:19,0:12:3.01:0,3,67	0/0:14,0:12:18.06:0,18,1656	0/0:17,0:17:14.77:0,15,939	0/0:31,0:31:20.18:0,20,1042	0/0:29,0:27:6.02:0,6,291	0/0:13,0:13:21.07:0,21,1574	0/0:26,0:25:36.12:0,36,2794	0/0:15,0:15:21.07:0,21,1759	1/1:12,6:19:12.02:673,12,0	./.	1/1:18,0:18:6:67,6,0	0/0:15,0:15:12.49:0,12,745	0/0:5,0:5:6.02:0,6,342	0/0:19,0:19:18.53:0,19,1470	0/0:19,0:18:25.44:0,25,2355	0/0:17,0:16:24.43:0,24,695	0/0:21,0:20:42.14:0,42,2938	0/0:35,0:33:39.59:0,40,2647	0/0:11,0:11:5.99:0,6,327	1/1:15,3:18:3.01:173,3,0	1/1:15,3:18:5.59:234,6,0	0/0:16,0:17:18.06:0,18,1497	0/0:10,0:10:12.04:0,12,752	0/0:20,0:19:39.59:0,40,3049	0/0:10,0:8:15.05:0,15,1194
chr10	6621793	.	CT	C	10646.40	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-1.383;DP=543;FS=21.615;HRun=10;HaplotypeScore=114.8764;InbreedingCoeff=0.9621;MQ=77.36;MQ0=3;MQRankSum=-4.845;QD=20.83;ReadPosRankSum=3.765;VQSLOD=3.9131;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,18:23:44.97:391,45,0	1/1:0,4:4:8.99:78,9,0	0/0:16,0:15:22.51:0,23,235	0/0:15,0:14:23.98:0,24,226	1/1:1,20:21:56.97:494,57,0	1/1:2,21:23:31.79:443,32,0	1/1:1,14:15:35.97:313,36,0	1/1:4,25:29:74.95:642,75,0	1/1:2,14:16:41.99:364,42,0	1/1:3,32:35:92.97:807,93,0	1/1:1,15:16:38.97:338,39,0	1/1:1,22:23:59.99:520,60,0	1/1:1,13:14:32.99:286,33,0	1/1:3,16:19:17.94:379,18,0	1/1:5,13:18:32.97:286,33,0	1/1:5,10:14:23.98:208,24,0	1/1:4,17:20:47.97:417,48,0	1/1:2,21:23:50.99:443,51,0	1/1:6,13:18:41.98:364,42,0	1/1:2,19:21:50.96:442,51,0	1/1:4,17:21:50.98:443,51,0	1/1:3,20:22:56.97:494,57,0	1/1:1,13:14:32.84:286,33,0	1/1:2,24:26:71.98:625,72,0	1/1:1,15:16:41.98:365,42,0	1/1:2,18:20:44.93:383,45,0	1/1:0,23:23:62.99:547,63,0	1/1:1,12:13:32.99:287,33,0
chr10	6622172	.	T	TC	2720.78	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-3.184;DP=606;FS=2.713;HRun=6;HaplotypeScore=127.1840;InbreedingCoeff=0.9847;MQ=75.94;MQ0=0;MQRankSum=-0.721;QD=29.26;ReadPosRankSum=1.838;VQSLOD=2.3326;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:51:99:0,141,1422	0/0:12,0:12:30.06:0,30,306	0/0:27,0:27:53.82:0,54,593	0/0:14,0:12:8.59:0,9,234	0/0:33,0:33:93.12:0,93,921	0/0:14,0:14:39.09:0,39,398	0/0:15,0:15:42.06:0,42,414	0/0:36,0:36:84.15:0,84,844	0/0:15,0:15:42.09:0,42,428	0/0:21,0:21:60.10:0,60,601	0/0:22,0:22:63.13:0,63,636	1/1:3,16:19:36.09:444,36,0	1/1:2,24:26:72.22:889,72,0	1/1:0,19:19:57.18:717,57,0	0/0:21,0:21:60.13:0,60,611	0/0:20,0:20:60.14:0,60,612	0/0:17,0:17:51.11:0,51,519	0/0:10,0:10:27.06:0,27,274	0/0:17,0:17:42.09:0,42,428	0/0:20,0:20:48.11:0,48,489	0/0:27,0:27:75.13:0,75,746	0/0:26,0:25:66.15:0,66,672	1/1:5,14:19:42.07:507,42,0	1/1:1,9:10:27.09:340,27,0	0/0:27,0:27:78.16:0,78,789	0/0:22,0:22:60.13:0,60,612	0/0:32,0:32:84.17:0,84,849	0/0:13,0:13:39.09:0,39,396
chr10	6623203	.	GTGGATGGATGGATGGATGGATGGATGATGGA	G	15399.16	PASS	AB=1.000;AC=48;AF=0.857;AN=56;BaseQRankSum=-2.970;DP=391;FS=37.596;HRun=0;HaplotypeScore=214.9732;InbreedingCoeff=0.3929;MQ=34.88;MQ0=60;MQRankSum=1.140;QD=47.68;ReadPosRankSum=2.537;VQSLOD=2.7882;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:10,0:9:12:347,12,0	1/1:8,0:7:12.03:395,12,0	0/0:32,0:6:8.83:0,9,57	0/0:27,0:3:3.01:0,3,102	1/1:15,0:14:20.93:372,21,0	1/1:9,0:9:21.07:771,21,0	1/1:12,0:12:18.06:528,18,0	1/1:9,0:6:6.02:115,6,0	1/1:16,0:16:42.13:1630,42,0	1/1:17,0:15:15.02:340,15,0	1/1:9,7:16:6.02:187,6,0	1/1:14,0:14:27.09:953,27,0	1/1:13,0:13:27.09:1079,27,0	1/1:13,0:13:21.07:758,21,0	1/1:14,0:14:24.08:891,24,0	1/1:9,0:9:15.05:589,15,0	1/1:14,0:11:20.99:728,21,0	0/1:4,0:2:54.64:122,0,55	0/0:9,0:8:0:0,0,0	1/1:4,7:10:5.94:41,6,0	1/1:22,0:13:17.97:340,18,0	1/1:17,0:17:33.07:1078,33,0	1/1:14,0:14:27.01:594,27,0	1/1:18,0:16:2.59:690,3,0	0/1:15,0:14:60.43:687,0,60	1/1:15,0:14:27.08:873,27,0	1/1:14,0:14:21.07:1003,21,0	1/1:4,0:3:9.03:287,9,0
chr10	6623222	.	G	GA	5610.39	PASS	AB=0.951;AC=49;AF=0.875;AN=56;BaseQRankSum=3.317;DP=299;FS=113.036;HRun=1;HaplotypeScore=84.0196;InbreedingCoeff=0.4193;MQ=36.75;MQ0=32;MQRankSum=-0.943;QD=23.09;ReadPosRankSum=2.682;VQSLOD=0.5000;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,3:8:16.98:147,17,0	1/1:5,0:4:12.02:123,12,0	0/0:30,0:11:24:0,24,260	0/0:26,0:10:18.04:0,18,207	1/1:6,3:8:20.91:182,21,0	1/1:7,0:7:20.92:220,21,0	1/1:8,0:8:23.83:221,24,0	1/1:7,1:4:11.95:138,12,0	1/1:12,2:14:42.06:443,42,0	1/1:9,1:9:24.01:271,24,0	1/1:11,0:11:6.02:78,6,0	1/1:10,1:11:27.04:304,27,0	1/1:8,2:10:27.04:311,27,0	1/1:6,1:7:20.41:200,20,0	1/1:7,1:8:24.06:275,24,0	1/1:4,1:5:15.04:164,15,0	1/1:9,1:9:14.10:161,14,0	0/1:3,0:3:25.50:25,0,67	1/1:4,0:2:3:42,3,0	1/1:10,0:9:11.92:99,12,0	1/1:14,3:12:20.97:206,21,0	1/1:11,4:14:41.97:438,42,0	1/1:9,2:11:29.96:318,30,0	0/1:14,1:15:15.01:174,0,15	0/1:10,1:10:24.17:221,0,24	1/1:9,2:10:30.08:350,30,0	1/1:11,0:11:33.08:386,33,0	1/1:4,0:4:9.03:116,9,0
chr10	6623223	.	A	AATGAC	10904.81	PASS	AB=0.699;AC=47;AF=0.870;AN=54;BaseQRankSum=1.239;DP=264;FS=107.066;HRun=0;HaplotypeScore=64.8863;InbreedingCoeff=0.3924;MQ=37.13;MQ0=33;MQRankSum=-0.772;QD=52.18;ReadPosRankSum=2.841;VQSLOD=1.6398;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,1:5:10.23:216,10,0	1/1:2,3:4:12.03:270,12,0	0/0:28,0:9:23.88:0,24,361	0/0:25,0:10:21.06:0,21,347	1/1:6,3:8:20.93:372,21,0	1/1:1,5:7:21.07:520,21,0	1/1:2,4:6:18.06:421,18,0	1/1:6,0:2:6.02:115,6,0	1/1:4,10:14:42.13:1085,42,0	1/1:5,1:5:15.04:298,15,0	1/1:8,1:10:6.02:187,6,0	1/1:4,6:10:27.09:624,27,0	1/1:3,6:9:27.09:692,27,0	1/1:2,4:7:21.07:549,21,0	1/1:3,5:8:24.08:587,24,0	1/1:1,4:5:15.05:422,15,0	1/1:5,5:9:5.46:360,5,0	0/1:3,1:3:76.70:77,0,113	./.	1/1:8,0:7:5.94:41,6,0	1/1:12,2:9:17.97:299,18,0	1/1:6,6:11:33.07:788,33,0	1/1:6,3:9:27.01:569,27,0	0/1:4,10:14:38.46:455,0,38	0/1:6,4:9:44.59:509,0,45	1/1:5,5:9:27.08:664,27,0	1/1:1,6:7:21.07:538,21,0	1/1:3,1:4:9.03:245,9,0
chr10	6623263	.	TGATGGATG	T	5874.31	PASS	AB=0.582;AC=40;AF=0.714;AN=56;BaseQRankSum=-7.713;DP=356;FS=15.777;HRun=0;HaplotypeScore=102.5500;InbreedingCoeff=0.5699;MQ=59.46;MQ0=8;MQRankSum=-2.932;QD=27.58;ReadPosRankSum=0.471;VQSLOD=3.0490;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,17:19:21.07:501,21,0	1/1:1,5:6:9.03:227,9,0	0/0:31,0:16:9.03:0,9,187	0/0:40,0:23:3.01:0,3,37	1/1:3,6:9:2.88:61,3,0	1/1:1,4:5:6.02:151,6,0	1/1:5,10:15:15.05:349,15,0	1/1:26,0:23:33.11:668,33,0	1/1:1,2:3:6.02:151,6,0	1/1:1,8:9:24.05:515,24,0	1/1:6,2:8:3.01:75,3,0	0/0:2,0:8:17.97:0,18,147	0/0:3,0:14:35.92:0,36,291	0/0:3,0:17:38.67:0,39,302	1/1:1,13:14:33.11:831,33,0	1/1:0,3:3:6.02:151,6,0	1/1:4,9:13:9.46:265,9,0	0/1:1,2:5:14.20:195,0,14	1/1:10,1:11:3.01:76,3,0	1/1:5,2:7:6.02:137,6,0	1/1:12,13:24:13.77:351,14,0	1/1:1,7:8:6.02:151,6,0	0/0:8,0:14:17.95:0,18,144	0/0:2,0:18:32.87:0,33,252	1/1:3,5:8:15.05:378,15,0	0/1:1,6:7:53.18:414,0,53	1/1:4,4:8:6.02:151,6,0	1/1:0,4:4:3.01:76,3,0
chr10	6624815	.	C	CA	4408.92	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=4.445;DP=576;FS=6.468;HRun=1;HaplotypeScore=154.6932;InbreedingCoeff=0.6845;MQ=56.60;MQ0=65;MQRankSum=-6.579;QD=8.56;ReadPosRankSum=0.483;VQSLOD=2.1458;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,17:22:14.83:100,15,0	1/1:3,0:8:8.99:73,9,0	0/0:31,0:20:54.17:0,54,680	0/0:30,0:21:49.94:0,50,588	1/1:9,11:19:17.87:143,18,0	1/1:14,14:23:20.63:156,21,0	1/1:6,10:14:19.06:179,19,0	1/1:7,17:16:35.59:446,36,0	1/1:5,1:13:7.78:43,8,0	1/1:11,14:23:49.38:585,49,0	1/1:10,8:16:8.92:86,9,0	1/1:3,7:6:5.98:60,6,0	1/1:6,4:20:12.92:117,13,0	1/1:4,16:17:26.70:180,27,0	1/1:5,1:15:17.91:132,18,0	1/1:8,3:26:14.94:118,15,0	1/1:4,9:11:20.88:183,21,0	1/1:6,1:10:7.18:38,7,0	1/1:5,16:21:41.92:549,42,0	1/1:7,6:26:21.14:98,21,0	1/1:13,9:17:8.82:104,9,0	1/1:6,1:17:7.07:37,7,0	1/1:9,9:15:17.84:136,18,0	1/1:12,11:20:8.33:76,8,0	1/1:6,3:13:11.98:115,12,0	1/1:9,12:18:44.02:478,44,0	1/1:6,3:20:14.90:115,15,0	1/1:3,2:12:7.25:65,7,0
chr10	6626542	.	GT	G	11547.80	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=8.112;DP=670;FS=6.436;HRun=10;HaplotypeScore=64.9558;InbreedingCoeff=0.9776;MQ=70.91;MQ0=0;MQRankSum=-2.358;QD=20.92;ReadPosRankSum=1.892;VQSLOD=5.9698;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,32:32:89.98:781,90,0	1/1:2,4:6:11.99:104,12,0	0/0:21,0:20:18.97:0,19,386	0/0:5,0:5:9:0,9,86	1/1:4,32:36:80.87:740,81,0	1/1:0,22:22:59.99:521,60,0	1/1:4,17:21:14.84:358,15,0	1/1:6,19:25:26.65:442,27,0	1/1:1,23:24:62.99:547,63,0	1/1:8,35:43:68.71:815,69,0	1/1:2,20:22:56.93:488,57,0	0/0:21,0:21:54.15:0,54,597	0/0:15,0:15:42.11:0,42,465	0/0:19,0:19:54.14:0,54,590	1/1:3,28:31:77.98:677,78,0	1/1:3,22:25:44.99:391,45,0	1/1:3,26:29:74.96:651,75,0	1/1:3,19:22:56.99:495,57,0	1/1:3,21:24:62.97:544,63,0	1/1:8,22:30:32.77:468,33,0	1/1:2,18:20:17.85:384,18,0	1/1:5,27:32:74.97:651,75,0	0/0:18,0:18:36.08:0,36,383	0/0:19,0:19:50.87:0,51,543	1/1:2,29:31:83.98:729,84,0	1/1:3,19:22:56.98:495,57,0	1/1:1,27:28:80.98:703,81,0	1/1:4,23:27:38.81:566,39,0
chr10	6627897	.	GACT	G	14452.55	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=4.630;DP=472;FS=0.000;HRun=0;HaplotypeScore=227.2848;InbreedingCoeff=0.9934;MQ=58.30;MQ0=0;MQRankSum=-6.648;QD=32.19;ReadPosRankSum=6.092;VQSLOD=4.7613;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,12:14:41.17:409,41,0	1/1:2,10:12:33.10:398,33,0	0/0:11,0:9:26.06:0,26,436	0/0:12,0:11:27.05:0,27,521	1/1:4,19:23:50.53:544,51,0	1/1:2,23:25:72.09:837,72,0	1/1:3,14:17:48.60:569,49,0	1/1:3,10:13:38.33:467,38,0	1/1:3,17:20:57.62:672,58,0	1/1:1,14:15:42.11:554,42,0	1/1:0,11:11:33.08:377,33,0	1/1:3,22:25:75.22:889,75,0	1/1:0,18:18:54.13:621,54,0	1/1:3,18:21:61.73:727,62,0	1/1:1,23:24:69.20:794,69,0	1/1:0,11:11:33.01:355,33,0	1/1:1,13:14:31.51:374,32,0	1/1:4,9:13:36.10:460,36,0	1/1:2,10:12:36.11:467,36,0	1/1:5,9:14:33.05:358,33,0	1/1:2,11:13:29.23:308,29,0	1/1:1,22:23:68.90:728,69,0	1/1:0,14:14:42.06:461,42,0	1/1:3,17:20:38.73:415,39,0	1/1:1,19:20:60.14:686,60,0	1/1:3,19:22:64.11:769,64,0	1/1:1,28:29:87.13:997,87,0	1/1:0,6:6:18.05:218,18,0
chr10	6627904	.	T	TCC	14984.13	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=2.718;DP=448;FS=16.781;HRun=1;HaplotypeScore=210.1108;InbreedingCoeff=0.9534;MQ=50.82;MQ0=0;MQRankSum=-5.531;QD=34.77;ReadPosRankSum=3.588;VQSLOD=2.9885;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,12:15:37.29:413,37,0	1/1:0,10:10:30.10:391,30,0	0/0:7,0:6:9.03:0,9,146	0/0:9,0:8:16.61:0,17,247	1/1:1,19:20:40.73:489,41,0	1/1:1,23:24:72.21:906,72,0	1/1:1,14:15:45.14:560,45,0	1/1:0,10:10:30.10:433,30,0	1/1:0,18:18:54.17:680,54,0	1/1:2,14:16:48.16:684,48,0	1/1:0,11:11:33.10:405,33,0	1/1:2,22:24:72.21:890,72,0	1/1:0,18:18:54.16:674,54,0	1/1:2,18:20:57.16:704,57,0	1/1:1,23:24:69.22:866,69,0	1/1:0,11:10:33:392,33,0	1/1:1,13:14:36.07:435,36,0	1/1:2,9:11:30.09:415,30,0	1/1:3,10:13:36.10:490,36,0	1/1:2,9:11:30.07:368,30,0	1/1:1,11:12:18.10:286,18,0	1/1:1,22:23:66.18:788,66,0	1/1:0,14:14:39.56:459,40,0	1/1:0,20:20:35.91:408,36,0	1/1:0,21:21:60.16:747,60,0	1/1:2,19:21:58.07:777,58,0	1/1:0,28:28:84.26:1083,84,0	1/1:0,6:6:18.06:239,18,0
chr10	6627905	.	T	TCCC	18847.79	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=1.707;DP=540;FS=16.093;HRun=1;HaplotypeScore=249.0027;InbreedingCoeff=0.9601;MQ=49.82;MQ0=0;MQRankSum=-4.708;QD=36.11;ReadPosRankSum=1.906;VQSLOD=1.5169;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:20:47.63:693,48,0	1/1:11,0:11:33.11:440,33,0	0/0:8,0:7:9.02:0,9,127	0/0:9,0:8:17.98:0,18,256	1/1:22,0:22:51.05:604,51,0	1/1:25,1:26:75.23:1009,75,0	1/1:17,0:17:51.16:671,51,0	1/1:19,0:19:51.17:777,51,0	1/1:26,0:26:69.21:946,69,0	1/1:22,0:22:63.21:952,63,0	1/1:13,0:13:33:365,33,0	1/1:26,0:26:78.22:999,78,0	1/1:19,0:19:56.91:681,57,0	1/1:27,0:27:78.24:1077,78,0	1/1:26,0:26:75.23:918,75,0	1/1:13,0:12:39.12:519,39,0	1/1:19,0:19:44.82:623,45,0	1/1:13,2:16:42.14:608,42,0	1/1:21,0:21:54.17:829,54,0	1/1:13,0:13:36.04:490,36,0	1/1:17,0:17:36.95:477,37,0	1/1:27,0:27:71.94:987,72,0	1/1:16,0:16:44.28:497,44,0	1/1:24,0:23:45.14:652,45,0	1/1:21,0:21:60.16:746,60,0	1/1:24,0:24:66.52:842,67,0	1/1:31,0:31:90.29:1214,90,0	1/1:6,0:6:18.05:233,18,0
chr10	6630792	.	TA	T	10100.02	PASS	AB=0.909;AC=43;AF=0.768;AN=56;BaseQRankSum=9.438;DP=549;FS=11.980;HRun=7;HaplotypeScore=58.2162;InbreedingCoeff=0.9258;MQ=79.16;MQ0=0;MQRankSum=-1.466;QD=24.57;ReadPosRankSum=4.093;VQSLOD=4.6043;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,126,1555	1/1:0,5:5:15.03:153,15,0	0/0:15,1:15:34.28:0,34,355	0/0:10,0:10:26.12:0,26,246	1/1:1,19:20:54.04:536,54,0	1/1:1,27:28:75.17:763,75,0	1/1:5,25:30:69.15:704,69,0	0/0:33,0:33:84.23:0,84,1019	1/1:1,17:18:51.12:520,51,0	1/1:0,22:22:63.10:628,63,0	1/1:2,13:15:36.08:367,36,0	1/1:2,14:16:39.09:397,39,0	1/1:1,15:16:42.09:428,42,0	1/1:1,19:20:48.11:489,48,0	1/1:1,24:25:63.14:643,63,0	1/1:1,16:17:48.11:490,48,0	1/1:0,22:22:63.14:643,63,0	1/1:1,16:17:42.04:416,42,0	1/1:3,12:15:35.87:349,36,0	1/1:1,18:19:51.11:520,51,0	1/1:2,17:19:39.09:398,39,0	1/1:0,11:11:30.07:306,30,0	1/1:1,17:18:45.10:459,45,0	1/1:2,19:21:54.12:551,54,0	1/1:0,17:17:33.08:337,33,0	0/1:18,2:20:4.04:4,0,583	0/0:22,0:22:60.19:0,60,755	0/0:13,0:13:39.12:0,39,489
chr10	6632372	.	A	AT	2344.78	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-7.324;DP=591;FS=4.765;HRun=9;HaplotypeScore=59.8636;InbreedingCoeff=0.9958;MQ=80.24;MQ0=0;MQRankSum=-0.417;QD=24.17;ReadPosRankSum=-0.173;VQSLOD=4.4347;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:57:99:0,116,1168	0/0:14,0:14:35.97:0,36,312	0/0:20,0:20:29.96:0,30,259	0/0:16,0:16:18.55:0,19,208	0/0:25,0:25:59.96:0,60,521	0/0:20,0:20:53.97:0,54,469	0/0:22,0:22:53.95:0,54,461	0/0:25,0:25:62.96:0,63,544	0/0:18,0:18:42.85:0,43,432	0/0:23,0:23:56.96:0,57,494	0/0:12,0:12:23.98:0,24,208	1/1:1,21:22:40.12:671,40,0	1/1:0,13:13:30.08:332,30,0	1/1:2,16:18:19.05:429,19,0	0/0:20,0:20:50.97:0,51,442	0/0:20,0:21:50.01:0,50,423	0/0:19,0:19:50.93:0,51,432	0/0:23,0:23:53.94:0,54,463	0/0:21,0:21:50.98:0,51,443	0/0:18,0:18:44.97:0,45,391	0/0:29,0:29:62.93:0,63,546	0/0:17,0:17:41.98:0,42,365	1/1:2,13:15:39.11:431,39,0	1/1:7,22:29:60.15:657,60,0	0/0:20,0:20:50.98:0,51,443	0/0:24,0:24:53.96:0,54,464	0/0:17,0:17:47.96:0,48,411	0/0:13,0:13:26.99:0,27,234
chr10	6634204	.	T	TG	2922.79	PASS	AB=0.714;AC=29;AF=0.518;AN=56;BaseQRankSum=-0.980;DP=425;FS=7.565;HRun=9;HaplotypeScore=80.7220;InbreedingCoeff=0.7933;MQ=79.53;MQ0=0;MQRankSum=-2.405;QD=15.14;ReadPosRankSum=-4.149;VQSLOD=2.6559;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:10,0:11:8.49:69,8,0	0/0:6,0:6:11.98:0,12,104	0/0:28,0:28:55.92:0,56,442	0/0:20,0:20:29.14:0,29,253	0/0:12,0:12:1.88:0,2,183	1/1:4,9:13:15.51:167,16,0	1/1:3,16:19:27.07:299,27,0	1/1:15,0:16:2.97:20,3,0	1/1:6,5:11:21.02:211,21,0	0/0:16,0:16:29.98:0,30,260	0/0:4,0:4:6:0,6,52	0/0:16,0:16:35.95:0,36,310	0/0:28,0:28:56.93:0,57,494	0/0:19,3:22:23.81:0,24,430	1/1:10,12:22:48.08:498,48,0	1/1:12,5:17:7.01:290,7,0	1/1:7,15:22:57.12:606,57,0	0/0:21,0:21:53.96:0,54,463	1/1:3,11:14:33.06:347,33,0	0/1:3,2:5:20.04:27,0,20	0/0:21,0:21:50.97:0,51,443	1/1:1,8:9:18.05:198,18,0	0/0:7,0:9:25.07:0,25,194	0/0:29,0:29:71.96:0,72,623	1/1:0,9:9:18.05:199,18,0	1/1:4,0:4:0.47:1,0,0	1/1:15,0:15:20.70:157,21,0	1/1:6,0:6:5.97:45,6,0
chr10	6634498	.	G	GTAATAATAATAA	6275.18	PASS	AC=44;AF=0.917;AN=48;BaseQRankSum=-0.729;DP=223;FS=0.000;HRun=0;HaplotypeScore=82.4485;InbreedingCoeff=0.1916;MQ=76.10;MQ0=0;MQRankSum=-2.151;QD=35.06;ReadPosRankSum=0.430;VQSLOD=4.1117;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,5:10:9.03:374,9,0	1/1:4,0:5:6.02:314,6,0	0/0:13,0:13:2.98:0,3,21	0/0:14,0:12:0.27:0,0,1	1/1:8,0:8:8.99:195,9,0	1/1:1,4:6:3.01:176,3,0	1/1:2,0:2:3.01:93,3,0	1/1:25,0:24:33.11:1019,33,0	1/1:4,0:6:6.02:193,6,0	1/1:7,0:10:3.01:157,3,0	./.	1/1:6,0:8:9.03:158,9,0	1/1:5,0:8:9.03:149,9,0	1/1:2,0:4:6.02:73,6,0	1/1:6,0:6:12.04:298,12,0	1/1:7,0:7:5.99:60,6,0	1/1:13,0:13:24.08:640,24,0	./.	1/1:12,0:12:12.04:608,12,0	1/1:2,1:3:3.01:144,3,0	./.	./.	1/1:2,0:3:3.01:37,3,0	1/1:0,0:1:3.01:37,3,0	1/1:5,5:10:9.03:527,9,0	1/1:8,0:10:6.02:314,6,0	1/1:5,0:7:6.02:301,6,0	1/1:11,0:9:9.03:410,9,0
chr10	6635138	.	CA	C	2244.07	PASS	AB=0.909;AC=11;AF=0.196;AN=56;BaseQRankSum=5.130;DP=433;FS=1.543;HRun=8;HaplotypeScore=74.7783;InbreedingCoeff=0.8828;MQ=60.61;MQ0=3;MQRankSum=-2.992;QD=19.86;ReadPosRankSum=0.782;VQSLOD=3.5093;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,11:21:48.05:454,48,0	0/0:5,0:5:15.05:0,15,181	0/0:21,1:11:12.91:0,13,89	0/0:19,0:11:10.92:0,11,98	0/0:22,0:23:56.24:0,56,719	0/0:12,0:12:30.09:0,30,362	0/0:5,0:5:15.05:0,15,181	1/1:7,14:20:54.09:521,54,0	0/0:12,0:12:30.09:0,30,362	0/0:20,0:20:57.17:0,57,685	0/0:15,0:15:42.13:0,42,505	0/0:12,0:12:21.06:0,21,251	0/0:4,0:4:12.04:0,12,145	0/0:11,0:11:24.05:0,24,278	0/0:6,0:6:18.06:0,18,217	0/0:8,0:8:23.99:0,24,259	0/0:20,0:20:57.17:0,57,686	0/0:28,0:28:69.20:0,69,821	0/0:25,0:24:65.94:0,66,745	0/0:18,0:18:48.15:0,48,580	0/0:11,0:11:33.10:0,33,399	0/0:11,0:11:30.09:0,30,362	0/1:9,1:10:4.96:5,0,212	0/0:9,0:9:27.07:0,27,315	0/0:23,0:23:69.21:0,69,833	1/1:5,22:26:33.01:600,33,0	1/1:4,9:13:33.05:318,33,0	1/1:1,20:19:54.08:521,54,0
chr10	6635167	.	AT	A	2719.53	PASS	AB=0.995;AC=17;AF=0.304;AN=56;BaseQRankSum=-1.669;DP=448;FS=4.953;HRun=4;HaplotypeScore=85.0417;InbreedingCoeff=0.3945;MQ=68.71;MQ0=2;MQRankSum=-5.648;QD=12.53;ReadPosRankSum=-2.871;VQSLOD=1.4744;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,12:14:38.98:418,39,0	0/0:10,0:10:25.86:0,26,96	0/0:15,0:11:22.20:0,22,147	0/0:17,0:13:16.12:0,16,171	0/1:25,1:26:16.21:16,0,128	0/0:14,0:14:34.09:0,34,136	0/1:9,0:8:8.47:8,0,35	1/1:9,17:26:69.17:781,69,0	0/1:13,0:13:21.41:21,0,60	0/1:24,0:24:29.58:30,0,101	0/1:14,0:14:35.65:36,0,59	0/0:12,0:12:24.08:0,24,328	0/0:9,0:9:27.09:0,27,376	0/0:10,0:10:20.98:0,21,269	0/1:7,0:7:13.83:14,0,23	0/0:10,0:10:23.07:0,23,88	0/0:25,0:25:57.85:0,58,229	0/0:20,0:20:26.44:0,26,151	0/0:23,0:23:13.22:0,13,115	0/1:22,0:22:14.85:15,0,121	0/0:10,0:10:17.58:0,18,63	0/0:11,0:11:28.86:0,29,118	0/0:13,0:13:30.01:0,30,361	0/0:7,0:7:21.07:0,21,283	0/0:23,0:23:3.11:0,3,130	1/1:8,19:26:50.39:735,50,0	1/1:2,13:15:39.12:464,39,0	1/1:4,16:18:33.03:369,33,0
chr10	6635202	.	C	CAA	1564.84	PASS	AB=1.000;AC=12;AF=0.214;AN=56;BaseQRankSum=-2.890;DP=479;FS=1.265;HRun=10;HaplotypeScore=90.9037;InbreedingCoeff=0.8172;MQ=67.75;MQ0=3;MQRankSum=0.044;QD=17.78;ReadPosRankSum=0.046;VQSLOD=2.5980;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:29.98:0,30,298	0/0:11,0:11:27.05:0,27,274	0/1:13,0:12:1.93:2,0,119	0/1:12,0:9:14.20:14,0,39	0/0:27,0:27:57.04:0,57,564	0/0:16,0:16:36.05:0,36,366	0/0:6,0:6:18.04:0,18,183	0/0:30,0:32:44.58:0,45,675	0/0:15,0:15:38.75:0,39,377	0/0:17,0:18:49.78:0,50,448	0/0:8,0:8:17.49:0,17,162	1/1:2,15:17:27.98:405,28,0	1/1:4,5:10:24.02:298,24,0	1/1:1,11:13:24.04:342,24,0	0/0:5,0:6:17.78:0,18,164	0/0:14,0:14:29.99:0,30,289	0/0:30,0:30:74.22:0,74,787	0/0:20,0:21:50.84:0,51,500	0/0:36,0:36:87.12:0,87,874	0/0:24,0:24:51.03:0,51,510	0/0:7,0:8:14.77:0,15,204	0/0:16,0:16:34.38:0,34,363	1/1:1,11:13:32.54:412,33,0	1/1:3,5:9:18.06:268,18,0	0/0:18,0:19:41.78:0,42,408	0/0:29,0:30:65.55:0,66,696	0/0:17,0:18:47.74:0,48,469	0/0:20,0:18:36.05:0,36,366
chr10	6635298	.	CT	C	5131.06	PASS	AB=1.000;AC=49;AF=0.875;AN=56;BaseQRankSum=6.544;DP=465;FS=12.755;HRun=1;HaplotypeScore=98.5743;InbreedingCoeff=0.4725;MQ=81.72;MQ0=0;MQRankSum=-7.276;QD=11.77;ReadPosRankSum=8.435;VQSLOD=1.3761;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:29:74.93:412,75,0	1/1:8,0:8:19.50:94,20,0	0/0:12,0:12:35.79:0,36,435	0/0:17,0:16:42:0,42,576	1/1:13,0:13:34.45:185,34,0	1/1:22,0:22:10.42:235,10,0	1/1:24,0:24:26.73:235,27,0	0/1:28,0:28:31.46:268,0,31	1/1:19,0:19:20.73:192,21,0	1/1:8,0:8:21.87:109,22,0	1/1:17,0:17:43.09:243,43,0	1/1:19,0:19:48.55:248,49,0	1/1:16,0:16:17.15:189,17,0	1/1:11,0:11:31.47:166,31,0	1/1:13,0:13:30.70:150,31,0	0/1:17,0:17:34.98:107,0,35	1/1:13,0:13:25.72:135,26,0	0/1:12,0:12:17.01:114,0,17	1/1:18,2:20:19.87:214,20,0	1/1:9,1:10:28.32:153,28,0	1/1:24,1:25:65.95:367,66,0	1/1:8,0:8:17.04:84,17,0	1/1:14,0:14:6.60:122,7,0	1/1:20,0:20:48.48:250,48,0	1/1:17,0:17:20.61:188,21,0	1/1:26,0:26:66.42:337,66,0	1/1:14,0:14:34.46:186,34,0	1/1:13,0:13:13.20:149,13,0
chr10	6635299	.	TG	T	14389.51	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-2.503;DP=461;FS=20.192;HRun=2;HaplotypeScore=65.9271;InbreedingCoeff=0.9907;MQ=81.89;MQ0=0;MQRankSum=-7.653;QD=33.31;ReadPosRankSum=5.076;VQSLOD=3.0376;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,29:29:78.25:1012,78,0	1/1:0,8:8:21.07:273,21,0	0/0:12,0:12:32.81:0,33,418	0/0:17,0:16:39.12:0,39,547	1/1:1,13:14:36.12:467,36,0	1/1:2,19:21:57.19:740,57,0	1/1:1,23:24:51.17:659,51,0	1/1:1,25:26:69.22:891,69,0	1/1:1,18:19:45.15:584,45,0	1/1:0,8:8:24.08:311,24,0	1/1:1,16:17:45.14:578,45,0	1/1:0,19:19:51.17:662,51,0	1/1:1,15:16:42.14:545,42,0	1/1:0,11:11:33.11:428,33,0	1/1:0,13:13:33.11:424,33,0	1/1:2,14:16:33.11:429,33,0	1/1:0,13:13:30.05:370,30,0	1/1:1,10:11:27.09:350,27,0	1/1:3,17:20:51.07:626,51,0	1/1:1,9:10:30.10:386,30,0	1/1:1,24:25:69.22:891,69,0	1/1:0,8:8:18.06:234,18,0	1/1:1,13:14:30.10:389,30,0	1/1:0,20:20:51.17:662,51,0	1/1:1,16:17:45.15:584,45,0	1/1:0,26:26:75.22:956,75,0	1/1:0,14:14:36.12:467,36,0	1/1:1,12:13:36.12:467,36,0
chr10	6635380	.	C	CAA	14672.38	PASS	AB=0.906;AC=45;AF=0.804;AN=56;BaseQRankSum=-5.404;DP=599;FS=66.482;HRun=0;HaplotypeScore=124.9619;InbreedingCoeff=0.1469;MQ=63.22;MQ0=11;MQRankSum=0.959;QD=26.34;ReadPosRankSum=9.771;VQSLOD=2.3410;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:27,2:28:6.75:487,7,0	0/1:3,9:12:25.85:86,0,26	0/0:22,0:15:42.14:0,42,612	0/0:20,0:13:38.74:0,39,517	1/1:17,1:18:32.77:550,33,0	1/1:33,0:32:74.60:1188,75,0	1/1:31,2:31:38.53:1079,39,0	1/1:20,23:43:35.87:1044,36,0	0/1:16,0:16:4.22:455,0,4	1/1:21,3:24:36.78:861,37,0	0/1:14,2:15:14.02:353,0,14	1/1:18,1:18:22.36:631,22,0	1/1:17,0:16:30.80:453,31,0	1/1:12,0:11:9.31:228,9,0	0/1:19,1:19:6.61:504,0,7	0/1:24,1:25:47.60:706,0,48	1/1:11,0:10:2.48:264,2,0	1/1:10,3:13:7.05:388,7,0	0/1:31,1:29:55.45:729,0,55	1/1:21,0:21:4.94:630,5,0	1/1:20,2:21:15.50:201,16,0	1/1:12,0:12:24.91:418,25,0	1/1:13,0:12:22.80:310,23,0	1/1:22,0:21:22.83:515,23,0	1/1:23,0:22:28.49:729,28,0	1/1:26,1:27:6.45:729,6,0	1/1:16,3:18:1.57:445,2,0	0/1:24,0:23:8.91:690,0,9
chr10	6635432	.	C	CTG	7149.45	PASS	AB=0.934;AC=46;AF=0.821;AN=56;BaseQRankSum=-3.654;DP=502;FS=59.620;HRun=0;HaplotypeScore=127.5129;InbreedingCoeff=0.1812;MQ=59.85;MQ0=26;MQRankSum=3.553;QD=15.12;ReadPosRankSum=5.316;VQSLOD=2.3261;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:34,0:32:26.40:372,26,0	1/1:10,0:10:0.69:161,1,0	0/0:13,0:9:26.98:0,27,236	0/0:16,0:9:8.95:0,9,95	1/1:24,0:24:62.56:521,63,0	1/1:22,0:22:40.95:363,41,0	1/1:22,0:20:3.65:260,4,0	1/1:26,0:24:65.70:533,66,0	1/1:15,0:15:24.49:339,24,0	1/1:21,0:20:39.43:371,39,0	1/1:12,0:11:20.95:169,21,0	0/1:13,0:12:36.97:86,0,37	1/1:14,0:14:13.08:177,13,0	1/1:2,8:9:3.01:54,3,0	0/1:18,1:17:21.05:230,0,21	1/1:17,1:17:40.44:509,40,0	0/1:7,8:13:26.79:27,0,42	0/1:19,0:19:0.46:292,0,0	0/1:16,0:14:17.67:201,0,18	1/1:22,1:22:61.93:519,62,0	1/1:14,0:12:5.71:48,6,0	1/1:16,0:16:44.82:353,45,0	1/1:7,0:5:5.99:49,6,0	0/1:20,0:19:23.15:161,0,23	1/1:15,1:16:38.97:354,39,0	1/1:26,0:25:11.55:398,12,0	1/1:21,0:21:24.68:309,25,0	1/1:20,0:18:26.04:296,26,0
chr10	6636511	.	ACAACCGTTTCACGAAGTCC	A	20871.70	PASS	AB=0.607;AC=19;AF=0.339;AN=56;BaseQRankSum=14.262;DP=651;FS=2.471;HRun=0;HaplotypeScore=359.2182;InbreedingCoeff=0.8926;MQ=86.94;MQ0=0;MQRankSum=-14.857;QD=108.14;ReadPosRankSum=3.499;VQSLOD=4.0909;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:10,17:27:60.21:2801,60,0	0/0:12,0:12:33.11:0,33,2734	0/0:29,0:29:84.27:0,84,4101	0/0:23,0:23:63.17:0,63,2896	0/0:29,0:29:84.27:0,84,6791	0/0:25,0:25:72.23:0,72,5694	0/0:25,0:25:75.24:0,75,5831	1/1:19,8:27:48.15:1829,48,0	0/0:18,0:18:54.19:0,54,4609	0/0:44,0:44:99:0,129,10539	0/0:12,0:12:33.11:0,33,2710	1/1:6,15:21:57.17:2688,57,0	1/1:1,16:17:48.16:2634,48,0	1/1:10,17:27:63.21:3032,63,0	0/0:30,0:30:90.27:0,90,6639	0/0:26,0:26:75.26:0,75,6592	0/0:26,0:26:78.27:0,78,6689	0/0:23,0:23:69.20:0,69,5377	0/0:22,0:22:66.20:0,66,4464	0/0:18,0:18:51.18:0,51,4180	0/0:51,0:51:99:0,153,12490	0/0:20,0:20:60.20:0,60,4687	1/1:2,12:14:39.13:2095,39,0	1/1:11,8:19:27.08:1154,27,0	0/0:25,0:25:75.24:0,75,6387	0/1:6,11:17:99:1772,0,515	1/1:6,16:22:54.17:2701,54,0	1/1:1,1:2:3.01:165,3,0
chr10	6636523	.	CGA	C	2700.06	PASS	AB=0.850;AC=19;AF=0.339;AN=56;BaseQRankSum=17.993;DP=602;FS=4.725;HRun=0;HaplotypeScore=191.9871;InbreedingCoeff=0.9027;MQ=85.07;MQ0=0;MQRankSum=-17.344;QD=17.42;ReadPosRankSum=3.576;VQSLOD=3.7191;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:17,7:24:63.89:584,64,0	0/0:9,0:9:27.09:0,27,549	0/0:27,0:27:78.20:0,78,1433	0/0:20,0:20:43.82:0,44,879	0/0:25,0:25:75.26:0,75,1502	0/0:25,0:25:75.24:0,75,1486	0/0:24,0:24:72.25:0,72,1463	1/1:9,2:11:31.66:226,32,0	0/0:17,0:17:51.18:0,51,1036	0/0:42,0:42:99:0,126,2521	0/0:12,0:12:36.12:0,36,727	1/1:15,5:20:54.65:404,55,0	1/1:16,2:18:51.47:321,51,0	1/1:17,2:19:54.48:360,54,0	0/0:25,0:25:72.25:0,72,1451	0/0:26,0:26:78.25:0,78,1549	0/0:29,0:29:84.29:0,84,1693	0/0:23,0:23:66.20:0,66,1263	0/0:24,0:24:72.25:0,72,1429	0/0:17,0:17:51.17:0,51,1002	0/0:54,0:54:99:0,163,3270	0/0:22,0:22:63.20:0,63,1242	1/1:12,0:12:34.17:170,34,0	1/1:8,4:12:23.23:217,23,0	0/0:26,0:26:75.26:0,75,1523	0/1:14,3:17:99:250,0,134	1/1:16,4:20:51.51:321,52,0	1/1:1,1:2:5.85:62,6,0
chr10	6636555	.	A	AT	9541.16	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=19.329;DP=674;FS=2.117;HRun=1;HaplotypeScore=181.0901;InbreedingCoeff=0.9616;MQ=83.51;MQ0=0;MQRankSum=-14.706;QD=38.79;ReadPosRankSum=-0.798;VQSLOD=4.2266;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,34:38:96.12:1346,96,0	0/0:11,0:11:33.11:0,33,428	0/0:30,0:30:72.12:0,72,862	0/0:25,0:25:63.16:0,63,774	0/0:22,0:22:66.11:0,66,803	0/0:25,0:25:69.17:0,69,849	0/0:24,0:24:63.18:0,63,790	1/1:2,30:32:93.26:1346,93,0	0/0:19,0:19:57.19:0,57,740	0/0:35,0:35:99:0,99,1285	0/0:19,0:19:51.17:0,51,662	1/1:4,20:24:63.14:890,63,0	1/1:1,24:25:72.19:1040,72,0	1/1:2,24:26:69.23:1030,69,0	0/0:23,0:23:69.22:0,69,882	0/0:23,0:23:69.22:0,69,895	0/0:25,0:25:75.24:0,75,973	0/0:22,0:22:63.15:0,63,783	0/0:17,0:17:51.14:0,51,624	0/0:18,0:18:54.16:0,54,686	0/0:49,0:49:99:0,147,1882	0/0:19,0:19:54.18:0,54,700	1/1:0,15:15:35.80:503,36,0	1/1:3,21:24:66.07:931,66,0	0/0:22,0:22:63.18:0,63,791	1/1:2,25:27:0.35:958,0,0	1/1:1,27:28:81.22:1184,81,0	1/1:0,7:7:21.07:314,21,0
chr10	6636859	.	A	AAC	468.72	PASS	AB=0.944;AC=11;AF=0.239;AN=46;BaseQRankSum=-3.766;DP=516;FS=7.920;HRun=0;HaplotypeScore=90.8878;InbreedingCoeff=0.3205;MQ=68.02;MQ0=7;MQRankSum=0.051;QD=3.23;ReadPosRankSum=0.224;VQSLOD=1.4296;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:22:2.84:0,3,14	./.	./.	./.	./.	0/0:11,0:13:5.66:0,6,45	0/0:23,0:23:2.82:0,3,19	0/1:34,0:34:0:0,0,0	0/0:17,0:17:11.98:0,12,116	0/1:14,0:14:0:0,0,0	0/0:6,0:9:5.68:0,6,28	1/1:7,3:10:3.01:44,3,0	./.	0/1:9,0:11:5.16:38,0,5	0/0:15,0:15:9.02:0,9,97	0/0:15,0:16:8.85:0,9,78	0/0:28,0:32:25.45:0,25,173	0/0:12,0:14:6.31:0,6,40	1/1:17,0:17:0.47:1,0,0	0/1:6,0:6:0:0,0,0	0/0:35,0:33:3.60:0,4,20	0/0:16,0:16:11.80:0,12,112	1/1:5,5:12:5.88:88,6,0	0/1:23,16:41:21.48:404,0,21	0/0:23,0:26:16.31:0,16,142	0/0:19,0:19:2.08:0,2,24	0/0:22,0:21:9.01:0,9,89	0/0:8,0:9:11.86:0,12,110
chr10	6637168	.	TA	T	4810.49	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=16.577;DP=681;FS=3.077;HRun=1;HaplotypeScore=77.0109;InbreedingCoeff=0.9998;MQ=85.76;MQ0=0;MQRankSum=-0.920;QD=35.11;ReadPosRankSum=1.790;VQSLOD=5.0271;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,117,1816	1/1:0,12:12:36.12:461,36,0	0/0:27,0:27:68.17:0,68,952	0/0:18,0:18:54.13:0,54,740	1/1:0,21:21:63.20:809,63,0	0/0:19,0:19:57.17:0,57,884	0/0:35,0:35:99:0,105,1629	0/0:29,0:29:87.27:0,87,1302	0/0:32,0:32:96.33:0,96,1534	1/1:0,27:27:81.24:1028,81,0	1/1:0,22:22:56.38:688,56,0	0/0:28,0:28:84.27:0,84,1317	0/0:20,0:20:60.12:0,60,926	0/0:21,0:21:63.20:0,63,973	0/0:15,0:15:42.14:0,42,671	0/0:25,0:25:75.26:0,75,1197	0/0:35,0:35:99:0,99,1475	1/1:0,28:28:75.21:944,75,0	0/0:23,0:23:69.23:0,69,1094	0/0:18,0:18:54.17:0,54,840	1/1:0,27:27:69.22:881,69,0	0/0:22,0:22:63.19:0,63,961	0/0:23,0:23:69.23:0,69,1068	0/0:30,0:30:90.25:0,90,1381	0/0:19,0:19:54.16:0,54,824	0/0:22,1:23:27.26:0,27,923	0/0:27,0:26:81.26:0,81,1250	0/0:16,0:16:48.16:0,48,764
chr10	6640600	.	G	GCCCC	3215.66	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-2.421;DP=625;FS=1.878;HRun=7;HaplotypeScore=108.0536;InbreedingCoeff=0.9922;MQ=86.87;MQ0=0;MQRankSum=-5.142;QD=35.34;ReadPosRankSum=-2.046;VQSLOD=1.1122;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:87.25:0,87,1361	0/0:6,0:7:15.01:0,15,212	0/0:24,0:24:54.16:0,54,826	0/0:20,0:20:53.91:0,54,806	0/0:27,0:27:78.26:0,78,1220	0/0:20,0:20:52.99:0,53,802	0/0:23,0:23:66.19:0,66,986	0/0:27,0:27:57.13:0,57,872	0/0:16,0:16:48.16:0,48,751	0/0:25,0:25:75.25:0,75,1155	0/0:18,0:18:51.16:0,51,776	1/1:6,9:17:33.11:767,33,0	1/1:6,12:20:39.13:920,39,0	1/1:5,12:21:33.11:826,33,0	0/0:19,0:19:54.18:0,54,845	0/0:19,0:19:57.19:0,57,892	0/0:30,0:30:78.20:0,78,1196	0/0:20,0:20:60.20:0,60,935	0/0:27,0:27:72.20:0,72,1078	0/0:18,0:18:48.14:0,48,729	0/0:36,0:36:93.27:0,93,1455	0/0:20,0:20:51.14:0,51,798	1/1:2,7:10:18.06:443,18,0	1/1:10,11:23:17.69:433,18,0	0/0:29,0:29:69.18:0,69,1077	0/0:33,0:33:96.29:0,96,1455	0/0:20,0:20:57.19:0,57,891	0/0:20,0:20:60.20:0,60,938
chr10	6641076	.	G	GC	1864.36	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-7.223;DP=418;FS=16.389;HRun=0;HaplotypeScore=64.3605;InbreedingCoeff=0.8902;MQ=85.93;MQ0=4;MQRankSum=0.058;QD=24.21;ReadPosRankSum=6.611;VQSLOD=3.3022;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,17:24:60.51:711,61,0	0/0:4,0:4:11.97:0,12,108	0/0:30,0:21:31.17:0,31,350	0/0:24,0:18:33.73:0,34,204	0/0:2,0:2:3.01:0,3,38	0/0:13,0:13:26.86:0,27,210	0/0:29,0:29:50.75:0,51,402	1/1:1,15:16:35.23:346,35,0	0/0:12,0:12:5.06:0,5,118	0/0:9,0:9:20.97:0,21,194	0/0:7,0:7:12.28:0,12,88	0/0:18,0:18:32.93:0,33,278	0/0:9,0:9:15:0,15,142	0/0:19,0:19:41.47:0,41,369	0/0:8,0:8:23.74:0,24,171	0/0:13,0:13:29.93:0,30,256	0/0:22,0:22:53.66:0,54,414	0/0:18,0:18:42.05:0,42,419	0/0:18,0:18:43.98:0,44,323	0/0:6,0:6:14.88:0,15,108	0/0:28,0:28:53.99:0,54,507	0/0:12,0:12:14.88:0,15,111	0/0:8,0:8:14.99:0,15,149	0/0:22,0:22:38.98:0,39,348	0/0:10,0:10:21.43:0,21,174	1/1:2,18:20:32.10:572,32,0	1/1:2,10:13:24.04:293,24,0	1/1:0,4:4:9.03:113,9,0
chr10	6641477	.	ATTTT	A	2525.36	PASS	AB=0.548;AC=16;AF=0.286;AN=56;BaseQRankSum=3.653;DP=543;FS=19.555;HRun=14;HaplotypeScore=107.3311;InbreedingCoeff=0.8272;MQ=74.37;MQ0=3;MQRankSum=-2.469;QD=16.19;ReadPosRankSum=5.308;VQSLOD=0.1764;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:2,0:23:49.89:0,50,361	0/0:8,0:14:42.14:0,42,786	0/0:26,0:15:32.70:0,33,462	0/0:24,0:15:19.69:0,20,243	0/0:18,0:22:57.16:0,57,1126	0/0:8,0:20:36.12:0,36,685	0/0:11,0:22:45.15:0,45,881	0/1:4,0:24:16.17:16,0,38	0/0:6,0:16:27.09:0,27,535	0/0:14,0:14:36.12:0,36,830	0/0:17,0:20:51.17:0,51,1083	1/1:2,20:22:54.16:764,54,0	1/1:1,19:20:51.17:722,51,0	1/1:2,10:12:27.07:382,27,0	0/0:5,0:13:27.09:0,27,510	0/0:4,0:16:33.11:0,33,642	0/0:9,0:31:39.11:0,39,731	0/0:18,0:21:51.17:0,51,1059	0/0:8,0:19:39.13:0,39,758	0/0:8,0:26:69.23:0,69,1301	0/0:20,0:21:57.20:0,57,1275	0/0:4,0:15:42.14:0,42,863	1/1:1,9:10:14.99:212,15,0	1/1:1,18:18:39.12:552,39,0	0/0:7,0:22:24.05:0,24,401	0/1:2,0:11:7.14:7,0,75	1/1:9,0:22:14.72:37,15,0	1/1:2,0:15:12.45:31,12,0
chr10	6641872	.	G	GA	2599.89	PASS	AB=0.705;AC=20;AF=0.357;AN=56;BaseQRankSum=1.266;DP=636;FS=5.005;HRun=10;HaplotypeScore=175.8962;InbreedingCoeff=0.8022;MQ=71.37;MQ0=0;MQRankSum=-2.115;QD=10.20;ReadPosRankSum=-2.321;VQSLOD=0.5352;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:10,2:46:40.80:211,41,0	0/0:12,0:12:29.95:0,30,243	0/0:19,0:18:17.94:0,18,188	0/0:20,0:20:26.04:0,26,201	0/0:20,1:21:12.85:0,13,264	0/0:18,0:18:32.89:0,33,265	0/0:26,0:26:65.82:0,66,531	1/1:12,2:27:37.29:227,37,0	0/0:23,0:25:52.94:0,53,424	0/0:17,0:17:26.90:0,27,219	0/0:12,0:12:6:0,6,109	1/1:6,19:25:41.80:435,42,0	1/1:10,18:28:38.49:597,38,0	0/1:5,13:19:25.39:150,0,25	0/0:23,0:23:56.88:0,57,464	0/0:31,0:32:76.89:0,77,618	0/0:31,0:31:77.87:0,78,640	0/0:16,0:17:46.97:0,47,375	0/0:23,0:23:38.50:0,38,301	0/1:12,2:15:11.05:11,0,127	0/0:43,2:45:25.81:0,26,622	0/0:17,0:17:38.85:0,39,311	1/1:6,8:14:21.94:225,22,0	1/1:5,23:28:63.11:653,63,0	0/0:21,0:22:43.49:0,43,334	1/1:9,0:18:3.96:118,4,0	1/1:8,0:21:22.17:111,22,0	1/1:5,0:14:14.27:72,14,0
chr10	6642130	.	CCACA	C	1498.06	PASS	AB=0.841;AC=35;AF=0.729;AN=48;BaseQRankSum=1.736;DP=587;FS=2.274;HRun=0;HaplotypeScore=109.9971;InbreedingCoeff=0.1494;MQ=68.91;MQ0=25;MQRankSum=-2.352;QD=3.88;ReadPosRankSum=0.876;VQSLOD=2.1593;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:34:7.86:0,8,33	1/1:8,2:10:3.01:46,3,0	./.	0/0:56,0:29:0.47:0,0,1	1/1:11,0:11:5.19:27,5,0	1/1:11,0:12:10.20:68,10,0	1/1:22,0:23:6:52,6,0	./.	1/1:14,0:17:6.01:56,6,0	0/1:12,6:17:15.95:153,0,16	./.	0/1:20,3:23:44.79:52,0,45	0/1:21,0:21:73.29:73,0,129	0/0:14,0:16:5.74:0,6,36	1/1:17,0:21:10.26:92,10,0	1/1:6,1:16:25.07:229,25,0	1/1:14,0:20:6.01:56,6,0	1/1:14,7:20:16.24:256,16,0	0/0:12,0:12:0.47:0,0,1	1/1:11,0:12:2.94:18,3,0	1/1:39,8:46:6:71,6,0	1/1:16,0:19:8.56:54,9,0	0/1:9,0:11:5.74:6,0,75	0/1:20,4:28:52.52:73,0,53	1/1:16,0:21:6:54,6,0	./.	1/1:14,0:21:14.85:139,15,0	1/1:7,0:9:6.01:56,6,0
chr10	6642856	.	G	GCTAGCCCAGC	27873.14	PASS	AB=0.635;AC=19;AF=0.339;AN=56;BaseQRankSum=-5.250;DP=732;FS=6.981;HRun=0;HaplotypeScore=204.6926;InbreedingCoeff=0.9290;MQ=75.24;MQ0=1;MQRankSum=-18.446;QD=108.46;ReadPosRankSum=-2.964;VQSLOD=3.4503;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:17,12:35:66.23:3018,66,0	0/0:15,0:15:42.12:0,42,1230	0/0:17,0:17:48.16:0,48,1306	0/0:18,0:18:33.12:0,33,1154	0/0:25,0:25:72.25:0,72,2444	0/0:20,0:20:60.21:0,60,1994	0/0:38,0:38:99:0,108,3370	1/1:11,8:25:69.22:2734,69,0	0/0:27,0:27:81.28:0,81,2665	0/0:32,0:32:93.31:0,93,2992	0/0:16,0:16:48.15:0,48,1470	1/1:12,20:36:90.31:4552,90,0	1/1:6,16:30:72.25:3628,72,0	1/1:6,13:22:54:2820,54,0	0/0:23,0:23:69.24:0,69,2267	0/0:20,0:20:60.21:0,60,2036	0/0:28,0:27:78.24:0,78,2532	0/0:31,0:31:90:0,90,2997	0/0:18,0:18:51.18:0,51,1725	0/0:22,0:22:66.21:0,66,1966	0/0:75,0:75:99:0,223,6901	0/0:19,0:19:54.18:0,54,1805	1/1:4,6:11:18.06:963,18,0	1/1:11,8:24:37.42:1785,37,0	0/0:31,0:31:90.28:0,90,2902	0/1:14,17:33:8.54:4193,0,9	1/1:7,13:25:51.10:2461,51,0	1/1:3,9:15:36.12:1719,36,0
chr10	6644305	.	T	TC	11654.74	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-14.691;DP=698;FS=1.275;HRun=0;HaplotypeScore=67.7198;InbreedingCoeff=0.9954;MQ=83.29;MQ0=0;MQRankSum=0.871;QD=43.81;ReadPosRankSum=2.204;VQSLOD=5.3531;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,56:57:99:2445,154,0	0/0:11,0:11:33.08:0,33,439	0/0:22,0:22:62.79:0,63,802	0/0:28,0:28:61.09:0,61,984	0/0:22,0:22:63.21:0,63,880	0/0:16,0:16:48.16:0,48,671	0/0:25,0:25:75.24:0,75,1034	1/1:0,31:31:93.30:1464,93,0	0/0:21,0:21:63.21:0,63,881	0/0:29,0:28:87.29:0,87,1216	0/0:18,0:18:51.15:0,51,682	1/1:0,15:15:42.14:670,42,0	1/1:1,16:17:48.16:766,48,0	1/1:0,27:27:78.27:1246,78,0	0/0:29,0:29:84.28:0,84,1174	0/0:24,0:24:72.21:0,72,986	0/0:23,0:23:69.21:0,69,932	0/0:25,0:25:66.22:0,66,923	0/0:25,0:25:75.25:0,75,1049	0/0:17,0:17:44.94:0,45,600	0/0:43,0:43:99:0,129,1768	0/0:32,0:32:93.31:0,93,1299	1/1:0,21:21:60.20:956,60,0	1/1:0,31:31:84.24:1314,84,0	0/0:22,0:22:66.22:0,66,922	1/1:2,30:32:12.36:1309,12,0	1/1:1,23:24:69.23:1101,69,0	1/1:0,11:11:24.08:383,24,0
chr10	6644501	.	T	TGTTTACAAACACACA	16754.32	PASS	AB=0.807;AC=54;AF=0.964;AN=56;BaseQRankSum=-2.149;DP=211;FS=71.456;HRun=0;HaplotypeScore=134.1724;InbreedingCoeff=-0.0699;MQ=82.87;MQ0=0;MQRankSum=-4.646;QD=79.40;ReadPosRankSum=1.023;VQSLOD=2.0660;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:13:30.10:986,30,0	1/1:9,0:9:15.05:751,15,0	0/1:8,0:9:97.70:550,0,98	0/1:6,1:10:36.65:1077,0,37	1/1:9,0:9:21.03:568,21,0	1/1:8,0:8:21.05:585,21,0	1/1:8,0:8:15.48:380,15,0	1/1:12,0:12:33.10:1452,33,0	1/1:2,0:2:6.02:246,6,0	1/1:11,0:11:23.86:702,24,0	1/1:13,0:13:33.11:1311,33,0	1/1:5,0:5:9.03:347,9,0	1/1:8,0:8:21.07:726,21,0	1/1:7,0:7:15.05:522,15,0	1/1:6,0:6:15.04:283,15,0	1/1:7,0:7:15.05:662,15,0	1/1:3,0:3:3.01:40,3,0	1/1:3,0:3:6.02:276,6,0	1/1:5,0:5:12.03:459,12,0	1/1:13,0:13:36.12:1388,36,0	1/1:8,0:8:12.51:325,13,0	1/1:8,0:8:21.07:699,21,0	1/1:9,0:9:18.06:624,18,0	1/1:5,0:4:12.04:403,12,0	1/1:10,0:10:18.06:580,18,0	1/1:3,0:3:6.01:106,6,0	1/1:5,0:5:15.04:590,15,0	1/1:2,0:2:6.02:117,6,0
chr10	6655824	.	T	TAC	757.98	PASS	AB=0.893;AC=18;AF=0.346;AN=52;BaseQRankSum=4.730;DP=773;FS=21.426;HRun=0;HaplotypeScore=394.4082;InbreedingCoeff=-0.0086;MQ=30.97;MQ0=10;MQRankSum=-3.755;QD=1.90;ReadPosRankSum=-0.636;VQSLOD=0.6073;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:9,0:9:2.22:7,2,0	1/1:10,0:10:5.74:17,6,0	./.	./.	0/1:32,3:35:2.02:2,0,34	0/0:21,5:26:3.15:0,3,40	0/0:7,2:9:3.45:0,3,25	0/1:25,1:16:99:142,0,200	0/0:28,8:36:23.70:0,24,245	0/1:49,5:52:99:182,0,537	0/0:42,1:43:22.73:0,23,156	0/1:35,4:39:2.44:2,0,84	0/0:29,5:34:1.78:0,2,52	0/0:27,3:29:8.67:0,9,89	0/0:54,2:56:5.80:0,6,77	0/1:25,6:31:2.55:4,0,3	0/0:6,2:8:8.72:0,9,92	0/1:14,1:15:49.56:53,0,50	0/1:12,4:13:99:168,0,243	0/0:37,1:38:4.88:0,5,114	0/0:38,2:31:17.14:0,17,224	0/1:55,4:58:0.03:0,0,55	0/0:29,4:31:7.41:0,7,57	0/1:9,1:10:0:0,0,0	0/1:38,2:41:5.32:9,0,5	0/1:28,3:27:76.90:77,0,244	0/1:10,6:16:11.54:205,0,12	1/1:7,0:7:6.87:26,7,0
chr10	6655871	.	AT	A	208.94	PASS	AB=0.859;AC=5;AF=0.089;AN=56;BaseQRankSum=9.072;DP=1181;FS=77.780;HRun=1;HaplotypeScore=419.4459;InbreedingCoeff=-0.0936;MQ=34.68;MQ0=58;MQRankSum=-7.546;QD=1.27;ReadPosRankSum=0.726;VQSLOD=-0.2262;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:12,1:13:14.38:0,14,127	0/0:13,2:15:22.66:0,23,358	0/0:51,0:6:18.05:0,18,246	0/0:68,0:11:32.95:0,33,422	0/0:47,6:53:57.80:0,58,1260	0/0:36,0:36:53.69:0,54,1090	0/0:14,0:12:22.84:0,23,340	0/0:50,3:35:13.02:0,13,1028	0/0:40,3:43:85.55:0,86,1282	0/0:86,3:84:91.22:0,91,2997	0/0:47,4:51:50.80:0,51,1014	0/0:40,5:45:27.69:0,28,801	0/1:38,3:41:15.60:16,0,880	0/0:35,2:37:54.80:0,55,861	0/0:64,4:68:99:0,112,1692	0/0:33,3:36:65.53:0,66,907	0/0:18,0:18:42.59:0,43,650	0/0:25,0:24:68.04:0,68,1039	0/0:35,0:19:56.88:0,57,772	0/0:44,7:50:9.36:0,9,1241	0/0:65,0:53:99:0,110,1791	0/0:69,8:75:75.90:0,76,1545	0/1:30,8:40:12.35:12,0,689	0/0:15,3:18:32.98:0,33,527	0/0:51,4:55:98.06:0,98,1245	0/1:41,5:36:99:212,0,607	0/1:22,3:24:2.98:3,0,292	0/1:7,4:10:37.94:74,0,38
chr10	6655912	.	G	GACAC	14686.79	PASS	AB=0.634;AC=19;AF=0.339;AN=56;BaseQRankSum=-3.210;DP=869;FS=21.901;HRun=0;HaplotypeScore=200.9347;InbreedingCoeff=0.9199;MQ=63.48;MQ0=2;MQRankSum=-11.036;QD=59.46;ReadPosRankSum=-0.728;VQSLOD=3.8569;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,11:14:30.08:681,30,0	0/0:14,0:14:39.13:0,39,721	0/0:35,0:32:90.19:0,90,1553	0/0:43,0:39:99:0,111,1911	0/0:35,0:35:77.96:0,78,1414	0/0:37,0:37:90.31:0,90,1689	0/0:15,0:14:39.09:0,39,703	1/1:15,8:20:50.42:972,50,0	0/0:40,0:40:96.33:0,96,1791	0/0:51,0:51:31.31:0,31,2440	0/0:22,0:22:43.39:0,43,781	1/1:4,34:39:90.31:2369,90,0	1/1:3,27:33:72.48:2064,72,0	1/1:7,23:30:75.23:1933,75,0	0/0:55,0:55:99:0,141,2628	0/0:36,0:36:96.33:0,96,1767	0/0:18,0:18:54.14:0,54,987	0/0:27,0:27:69.17:0,69,1238	0/0:30,0:30:87.26:0,87,1594	0/0:36,0:36:99:0,105,1935	0/0:60,0:57:99:0,148,2766	0/0:36,0:36:90.30:0,90,1628	1/1:6,27:33:71.81:2050,72,0	1/1:1,18:19:48.16:1294,48,0	0/0:32,0:32:78.26:0,78,1404	0/1:11,15:26:43.18:1331,0,43	1/1:4,17:21:62.20:1477,62,0	1/1:4,5:9:24:516,24,0
chr10	6656872	.	AATAAT	A	2756.36	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=2.196;DP=234;FS=9.767;HRun=0;HaplotypeScore=75.9248;InbreedingCoeff=0.7036;MQ=60.24;MQ0=0;MQRankSum=-3.284;QD=32.05;ReadPosRankSum=-1.662;VQSLOD=1.9240;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,8:14:15.52:206,16,0	0/0:4,0:4:12.04:0,12,207	0/0:8,0:6:6.02:0,6,77	0/0:7,0:6:8.99:0,9,86	0/0:11,0:11:20.31:0,20,320	0/0:9,0:9:24.07:0,24,414	0/0:2,0:2:3.01:0,3,39	1/1:5,32:37:96.27:1406,96,0	0/0:11,0:11:21.07:0,21,353	0/0:4,0:4:9.02:0,9,135	0/1:4,0:4:2.58:5,0,3	0/0:4,0:4:6.02:0,6,130	0/0:5,0:5:12.04:0,12,213	0/0:5,0:5:9.03:0,9,169	0/0:6,0:6:15.05:0,15,288	0/0:4,0:4:1.82:0,2,5	0/0:20,0:20:51.17:0,51,1095	0/0:15,0:15:38.84:0,39,664	0/0:7,0:7:18.06:0,18,297	0/0:9,0:9:21.07:0,21,325	0/0:4,0:4:12.04:0,12,207	0/0:2,0:2:3.01:0,3,39	0/0:1,0:1:3.01:0,3,39	0/0:2,0:2:6.02:0,6,109	0/0:8,0:8:24.07:0,24,485	1/1:3,8:11:24.08:471,24,0	1/1:3,8:11:18.06:365,18,0	1/1:1,8:9:24.08:471,24,0
chr10	6656877	.	T	TATA	2535.54	PASS	AB=1.000;AC=36;AF=0.783;AN=46;BaseQRankSum=-4.696;DP=218;FS=0.000;HRun=0;HaplotypeScore=63.4125;InbreedingCoeff=0.4631;MQ=59.56;MQ0=1;MQRankSum=2.734;QD=14.01;ReadPosRankSum=-1.277;VQSLOD=2.9868;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,0:10:6.22:32,6,0	1/1:2,0:4:6.02:78,6,0	./.	./.	1/1:10,0:10:6.02:68,6,0	1/1:2,1:9:18.06:235,18,0	./.	0/1:38,0:37:59.14:59,0,92	1/1:6,2:9:6.02:115,6,0	1/1:2,0:4:5.95:57,6,0	1/1:0,1:5:12.04:156,12,0	0/0:2,0:2:3.01:0,3,41	1/1:3,1:4:6.02:115,6,0	0/0:3,0:3:3.01:0,3,41	1/1:2,4:6:9.03:177,9,0	1/1:2,0:2:3.01:50,3,0	1/1:6,17:23:24.15:637,24,0	1/1:8,1:19:15.05:196,15,0	1/1:3,3:6:9.03:168,9,0	1/1:5,2:7:6.02:113,6,0	1/1:4,0:4:2.22:7,2,0	./.	./.	1/1:1,1:2:3.01:59,3,0	1/1:2,7:9:18.06:354,18,0	0/0:9,0:9:18.44:0,18,132	0/1:10,0:10:0.45:0,0,79	0/0:9,0:9:20.59:0,21,135
chr10	6659628	.	G	GT	3848.22	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-11.790;DP=639;FS=0.831;HRun=5;HaplotypeScore=58.7580;InbreedingCoeff=0.9941;MQ=66.40;MQ0=0;MQRankSum=-1.724;QD=28.72;ReadPosRankSum=-0.102;VQSLOD=3.6744;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,41:43:93.30:1224,93,0	0/0:7,0:7:21.03:0,21,216	0/0:11,0:11:23.37:0,23,206	0/0:11,0:11:22.29:0,22,224	0/0:33,0:33:84.13:0,84,862	0/0:24,0:23:66.12:0,66,689	0/0:16,0:16:48.11:0,48,507	1/1:4,21:25:60.13:707,60,0	0/0:27,0:27:78.14:0,78,810	0/0:24,0:24:69.15:0,69,732	0/0:21,0:21:45.04:0,45,454	0/0:22,0:22:60.13:0,60,631	0/0:15,0:15:42.07:0,42,434	0/0:19,0:19:54.11:0,54,570	0/0:16,0:16:45.11:0,45,483	0/0:21,0:21:60.11:0,60,626	0/0:22,0:22:57.14:0,57,612	0/0:21,0:21:60.15:0,60,643	0/0:34,0:34:81.14:0,81,838	0/0:33,0:33:96.22:0,96,1015	0/0:21,0:21:63.11:0,63,657	0/0:34,0:34:96.21:0,96,1015	0/0:32,0:32:80.76:0,81,844	0/0:21,0:21:51.10:0,51,538	0/0:20,0:20:48.11:0,48,508	1/1:2,24:26:43:901,43,0	1/1:2,30:32:63.20:820,63,0	1/1:0,6:6:15.05:197,15,0
chr10	6661594	.	TA	T	2443.06	PASS	AB=0.854;AC=24;AF=0.429;AN=56;BaseQRankSum=14.499;DP=738;FS=6.606;HRun=13;HaplotypeScore=86.1991;InbreedingCoeff=0.6837;MQ=69.13;MQ0=0;MQRankSum=0.373;QD=6.66;ReadPosRankSum=1.990;VQSLOD=2.6416;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,30:36:45.95:488,46,0	0/0:12,0:12:24.04:0,24,234	0/1:8,3:8:10.36:33,0,10	0/1:18,3:19:30:30,0,73	0/0:26,2:28:7.09:0,7,366	0/0:29,2:31:59.20:0,59,728	0/0:22,3:26:6.12:0,6,513	1/1:3,24:28:73.55:525,74,0	0/0:23,0:25:54.91:0,55,537	0/0:31,1:32:50.89:0,51,619	0/1:24,4:28:18.44:18,0,422	1/1:4,1:27:43.70:139,44,0	1/1:4,0:27:44.80:129,45,0	1/1:5,0:32:42.76:124,43,0	0/1:38,6:44:43.87:44,0,567	0/0:32,1:35:55.90:0,56,664	0/0:22,0:22:60.03:0,60,569	0/0:18,0:18:38.82:0,39,337	0/0:20,1:21:10.97:0,11,251	0/0:28,0:32:48.62:0,49,550	0/0:20,1:22:20.12:0,20,340	0/0:33,1:37:69.89:0,70,667	1/1:7,0:27:30.50:88,31,0	1/1:1,0:18:30.33:87,30,0	0/0:28,2:30:29.97:0,30,568	1/1:8,16:25:46.68:331,47,0	1/1:6,22:30:66.61:468,67,0	1/1:4,9:13:20.87:153,21,0
chr10	6661748	.	CCAT	C	317.86	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.990;DP=936;FS=1.243;HRun=0;HaplotypeScore=133.6236;InbreedingCoeff=0.9945;MQ=63.91;MQ0=1;MQRankSum=-2.204;QD=15.14;ReadPosRankSum=1.144;VQSLOD=3.5947;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,117,2258	0/0:8,0:8:21.07:0,21,440	0/0:34,0:29:54.13:0,54,1000	0/0:41,0:38:65.98:0,66,1113	0/0:27,0:27:75.24:0,75,1518	0/0:25,0:25:63.20:0,63,1280	0/0:30,0:30:81.28:0,81,1645	0/0:47,0:47:99:0,111,2249	0/0:31,0:31:81.26:0,81,1657	0/0:44,0:44:99:0,105,2006	0/0:11,0:11:27.96:0,28,530	0/0:44,0:44:99:0,120,2431	0/0:39,0:39:99:0,105,2159	0/0:30,0:30:72.23:0,72,1438	0/0:47,0:47:99:0,123,2485	0/0:38,0:38:90.31:0,90,1869	0/0:32,0:32:87.26:0,87,1735	1/1:5,15:21:29.78:412,30,0	0/0:21,0:21:53.76:0,54,990	0/0:30,0:30:75.26:0,75,1570	0/0:83,0:83:99:0,190,3856	0/0:29,0:29:63.20:0,63,1277	0/0:14,0:14:39.12:0,39,748	0/0:60,0:60:99:0,156,3148	0/0:31,0:31:78.27:0,78,1592	0/0:30,0:30:84.29:0,84,1729	0/0:28,0:28:69.24:0,69,1443	0/0:16,0:16:45.15:0,45,917
chr10	6665233	.	GACACAC	G	3195.29	PASS	AB=0.691;AC=24;AF=0.429;AN=56;BaseQRankSum=4.457;DP=634;FS=2.640;HRun=0;HaplotypeScore=155.8295;InbreedingCoeff=0.7227;MQ=58.08;MQ0=18;MQRankSum=-6.473;QD=11.70;ReadPosRankSum=2.585;VQSLOD=2.8241;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:20,0:37:15.57:16,0,542	1/1:8,0:13:12.04:168,12,0	0/0:40,0:17:3:0,3,26	0/0:37,0:25:12.04:0,12,228	1/1:6,0:21:27.09:377,27,0	0/0:11,0:20:21.07:0,21,539	0/0:15,0:24:23.33:0,23,635	0/0:25,0:28:4.32:0,4,56	0/0:11,0:23:36.11:0,36,906	1/1:11,0:25:40.60:523,41,0	1/1:9,0:21:24.08:333,24,0	1/1:6,14:20:30.97:582,31,0	1/1:5,10:14:23.94:430,24,0	1/1:3,9:13:21.07:390,21,0	0/0:15,0:21:15.52:0,16,344	0/0:12,0:19:15.05:0,15,400	0/0:19,0:31:24.06:0,24,538	1/1:13,0:17:3.01:42,3,0	0/0:18,0:20:22.63:0,23,561	0/0:15,0:25:12.15:0,12,325	1/1:20,0:24:3.01:42,3,0	0/0:17,0:17:15.04:0,15,356	1/1:4,11:18:15.52:250,16,0	1/1:15,12:26:15.52:234,16,0	0/0:8,0:16:6.02:0,6,145	0/1:11,0:19:15.61:16,0,328	0/0:8,0:21:22.42:0,22,348	0/0:4,0:11:15.01:0,15,221
chr10	6668239	.	GCTCTCT	G	138.98	PASS	AB=0.878;AC=6;AF=0.120;AN=50;BaseQRankSum=3.929;DP=634;FS=2.357;HRun=0;HaplotypeScore=121.3659;InbreedingCoeff=0.1093;MQ=63.02;MQ0=19;MQRankSum=-1.859;QD=1.31;ReadPosRankSum=-0.912;VQSLOD=2.4055;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:11.99:0,12,106	0/0:11,0:10:6.47:0,6,72	./.	./.	0/0:26,0:25:3:0,3,25	0/0:21,0:21:9.50:0,10,259	0/0:11,0:11:5.99:0,6,48	0/0:35,0:33:5:0,5,26	0/0:25,0:25:18.06:0,18,490	0/0:24,0:23:12.11:0,12,132	./.	0/1:17,5:22:14.96:109,0,15	0/1:18,2:20:12.97:54,0,13	0/1:13,3:16:6.88:52,0,7	0/0:27,0:27:33.54:0,34,702	0/0:20,0:22:20.74:0,21,175	0/0:32,0:31:39.05:0,39,777	0/0:12,0:16:14.13:0,14,193	0/0:27,0:27:10.57:0,11,131	0/0:17,0:17:3.01:0,3,50	0/0:28,0:28:8.67:0,9,65	0/0:23,0:22:17.98:0,18,381	0/0:15,0:15:0:0,0,0	1/1:20,1:30:3.54:7,4,0	0/0:17,0:16:15:0,15,232	0/1:17,0:18:26.80:27,0,162	0/0:36,0:34:30.90:0,31,435	0/0:5,0:5:3.01:0,3,35
chr10	6670756	.	G	GTA	3119.41	PASS	AB=1.000;AC=40;AF=0.800;AN=50;BaseQRankSum=-1.752;DP=518;FS=6.907;HRun=0;HaplotypeScore=96.4820;InbreedingCoeff=-0.1972;MQ=57.52;MQ0=10;MQRankSum=-0.125;QD=6.61;ReadPosRankSum=0.746;VQSLOD=2.7116;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/1:8,0:8:16.19:22,0,16	./.	./.	1/1:24,1:25:19.25:254,19,0	1/1:17,0:17:8.73:61,9,0	1/1:22,0:21:35.90:292,36,0	1/1:35,0:32:75.87:605,76,0	1/1:20,0:20:2.74:12,3,0	1/1:28,0:28:22.08:428,22,0	0/1:26,0:26:12.30:238,0,12	1/1:6,0:6:5.94:43,6,0	1/1:18,0:17:6.48:65,6,0	0/1:19,0:19:12.86:35,0,13	0/1:19,0:19:15.82:17,0,16	0/1:15,0:15:15.07:41,0,15	0/1:24,0:23:6.32:102,0,6	0/1:6,0:6:16.04:34,0,16	1/1:16,0:12:20.43:169,20,0	0/1:22,0:22:5.76:6,0,18	0/1:17,0:17:22.92:156,0,23	1/1:10,0:10:2.74:12,3,0	1/1:27,1:27:10.38:48,10,0	1/1:15,1:15:14.30:118,14,0	0/1:17,0:17:7.12:7,0,19	1/1:18,0:17:24.95:320,25,0	1/1:7,0:28:8.86:85,9,0	1/1:11,0:12:11.04:87,11,0
chr10	6670766	.	A	ATATGTGTGTG	3648.22	PASS	AB=0.795;AC=29;AF=0.580;AN=50;BaseQRankSum=-5.221;DP=535;FS=23.020;HRun=0;HaplotypeScore=154.1808;InbreedingCoeff=-0.1904;MQ=54.93;MQ0=12;MQRankSum=-0.939;QD=8.71;ReadPosRankSum=1.604;VQSLOD=1.0931;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:32:1.34:0,1,3	0/1:8,0:9:10.06:10,0,240	./.	./.	0/1:21,0:23:99:128,0,382	1/1:8,7:19:5.99:49,6,0	1/1:21,0:20:36.37:293,36,0	1/1:38,0:35:78.62:617,79,0	0/1:1,0:20:0:0,0,0	0/1:29,0:30:99:382,0,488	0/1:23,0:25:99:217,0,528	1/1:5,0:5:8.10:51,8,0	1/1:2,0:13:6.90:137,7,0	0/1:2,0:20:14.95:55,0,15	0/0:1,11:18:2.60:0,3,24	0/1:3,10:16:15.30:214,0,15	0/1:6,17:30:5.84:424,0,6	0/1:9,0:9:26.43:26,0,282	1/1:15,0:10:24:285,24,0	0/0:3,17:23:2.95:0,3,24	0/1:17,0:17:99:153,0,294	./.	0/1:7,0:30:11.25:11,0,36	1/1:17,0:16:1.32:100,1,0	0/0:5,11:20:2.99:0,3,25	0/1:13,0:20:99:219,0,146	0/1:26,0:26:82.89:117,0,83	1/1:3,0:11:9.03:159,9,0
chr10	6672349	.	TATATATATAC	T	398.87	PASS	AB=1.000;AC=11;AF=0.367;AN=30;BaseQRankSum=-2.141;DP=154;FS=1.217;HRun=0;HaplotypeScore=38.5310;InbreedingCoeff=0.2521;MQ=73.72;MQ0=8;MQRankSum=-1.232;QD=10.78;ReadPosRankSum=-0.358;VQSLOD=1.3806;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:11:5.38:80,5,0	./.	0/0:25,0:5:0:0,0,0	0/0:33,0:9:5.20:0,5,37	0/1:3,0:3:18.93:19,0,103	./.	./.	0/0:19,0:19:13.19:0,13,1095	./.	0/0:3,0:3:9.03:0,9,174	0/0:3,0:3:3.01:0,3,126	1/1:0,2:2:3.01:95,3,0	1/1:3,0:3:6.02:167,6,0	./.	./.	./.	./.	0/0:12,0:12:12.04:0,12,788	0/1:7,0:7:49.85:50,0,219	./.	./.	./.	1/1:0,3:3:3.01:94,3,0	./.	./.	0/0:5,0:5:9.03:0,9,319	0/0:1,0:1:3:0,3,25	0/1:8,0:8:4.02:4,0,277
chr10	6672351	.	TATATATAC	T	527.38	PASS	AB=1.000;AC=19;AF=0.559;AN=34;BaseQRankSum=-3.676;DP=163;FS=2.235;HRun=0;HaplotypeScore=36.3684;InbreedingCoeff=0.0391;MQ=74.68;MQ0=11;MQRankSum=0.407;QD=6.59;ReadPosRankSum=-2.862;VQSLOD=0.8860;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:2,10:12:6.02:112,6,0	./.	0/0:28,0:6:0.89:0,1,3	0/0:35,0:9:4.26:0,4,57	0/1:3,0:3:18.93:19,0,70	./.	./.	0/1:21,0:21:21.25:21,0,827	./.	0/0:3,0:3:5.43:0,5,91	0/0:2,0:2:3.01:0,3,100	1/1:2,0:2:3.01:60,3,0	1/1:3,0:3:6.02:118,6,0	./.	./.	1/1:1,0:1:3:25,3,0	./.	0/1:13,0:13:26.94:27,0,563	0/1:7,0:7:49.89:50,0,134	./.	./.	./.	1/1:3,0:3:3.01:59,3,0	1/1:2,0:2:3:25,3,0	./.	0/0:3,0:3:9.03:0,9,241	1/1:5,0:5:11.45:98,11,0	0/1:8,0:8:32.58:33,0,171
chr10	6673232	.	CT	C	2347.85	PASS	AB=0.799;AC=23;AF=0.411;AN=56;BaseQRankSum=2.359;DP=593;FS=0.788;HRun=13;HaplotypeScore=76.8850;InbreedingCoeff=0.3691;MQ=77.41;MQ0=3;MQRankSum=0.467;QD=6.56;ReadPosRankSum=2.081;VQSLOD=2.6157;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:29:65.93:0,66,621	0/0:7,0:8:20.87:0,21,189	0/1:30,1:22:10.38:10,0,210	0/1:31,1:22:9.08:9,0,123	0/1:27,3:30:3.50:3,0,440	1/1:4,13:17:29.77:219,30,0	1/1:4,14:19:37.29:267,37,0	0/0:29,1:30:26.11:0,26,402	1/1:2,11:13:20.84:153,21,0	0/0:24,2:26:10.28:0,10,414	0/0:27,2:29:46.38:0,46,583	0/0:1,0:9:17.36:0,17,109	0/0:6,0:18:31.56:0,32,180	0/0:3,0:20:34.35:0,34,184	1/1:5,15:20:17.05:184,17,0	1/1:4,7:11:17.89:131,18,0	1/1:8,25:34:22.04:423,22,0	0/1:23,6:30:15.76:16,0,477	0/1:9,13:22:12.32:221,0,12	0/1:7,12:19:19.60:202,0,20	0/0:13,0:13:24.02:0,24,224	0/1:6,14:20:16.61:220,0,17	0/0:3,0:18:31.25:0,31,157	0/0:3,0:12:22.03:0,22,112	1/1:0,22:22:59.66:438,60,0	0/1:15,3:20:11.98:12,0,353	0/0:23,0:23:53.89:0,54,490	0/1:13,4:17:36.60:37,0,315
chr10	6673384	.	C	CTTT	5346.19	PASS	AB=0.581;AC=50;AF=0.893;AN=56;BaseQRankSum=-2.714;DP=547;FS=12.466;HRun=13;HaplotypeScore=90.6355;InbreedingCoeff=0.5000;MQ=76.93;MQ0=0;MQRankSum=-3.040;QD=10.34;ReadPosRankSum=1.251;VQSLOD=1.0683;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,0:43:10.76:267,11,0	1/1:3,1:12:17.95:165,18,0	0/0:11,0:11:19.97:0,20,164	0/0:15,0:15:10.97:0,11,87	1/1:7,1:24:31.15:298,31,0	1/1:4,1:15:18.42:168,18,0	1/1:5,0:22:22.10:147,22,0	1/1:17,0:28:29.92:263,30,0	0/1:4,1:13:12.82:128,0,13	1/1:4,0:18:32.22:233,32,0	1/1:2,0:11:23.90:200,24,0	1/1:2,1:12:12.86:125,13,0	1/1:2,0:22:33.23:241,33,0	1/1:2,0:17:20.91:170,21,0	0/1:6,1:24:1.14:208,0,1	1/1:4,0:19:26.92:223,27,0	1/1:3,1:18:32.23:281,32,0	1/1:2,0:20:17.92:150,18,0	1/1:7,0:17:32.76:302,33,0	1/1:12,2:23:1.82:265,2,0	1/1:5,0:25:25.16:186,25,0	1/1:3,1:18:2.36:209,2,0	1/1:3,0:10:6.45:47,6,0	1/1:3,0:21:27.65:193,28,0	1/1:9,0:21:8.01:52,8,0	1/1:6,0:23:45.30:323,45,0	1/1:10,3:33:45.31:433,45,0	1/1:5,0:8:8.97:69,9,0
chr10	6678094	.	A	AT	2356.73	PASS	AB=0.533;AC=7;AF=0.125;AN=56;BaseQRankSum=-8.400;DP=509;FS=32.092;HRun=9;HaplotypeScore=53.0957;InbreedingCoeff=0.8747;MQ=70.73;MQ0=3;MQRankSum=-0.023;QD=24.81;ReadPosRankSum=-2.269;VQSLOD=1.4891;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:29:74.01:0,74,631	0/0:6,0:6:18:0,18,156	0/0:22,0:13:16.20:0,16,153	0/0:25,1:18:24.48:0,24,189	0/0:17,0:17:41.99:0,42,364	0/0:25,0:25:71.98:0,72,625	0/0:15,0:15:41.94:0,42,356	1/1:7,26:33:55.16:837,55,0	0/0:12,0:12:29.99:0,30,260	0/0:18,0:18:21.62:0,22,318	0/0:28,0:28:74.97:0,75,651	0/0:16,0:16:44.99:0,45,391	0/0:18,0:18:44.96:0,45,391	0/0:11,0:11:29.90:0,30,247	0/0:14,0:14:38.99:0,39,339	0/0:12,0:12:35.99:0,36,313	0/0:15,0:15:41.99:0,42,365	0/0:18,0:18:27.47:0,27,334	0/0:22,0:22:47.98:0,48,417	0/0:21,1:22:26.80:0,27,462	0/0:12,0:12:35.99:0,36,313	0/0:5,0:5:15:0,15,130	0/0:15,0:15:41.99:0,42,364	0/0:11,0:11:32.99:0,33,287	0/0:24,0:24:65.97:0,66,573	0/1:2,14:16:3.99:416,0,4	1/1:5,17:22:51.13:556,51,0	1/1:0,24:24:63.17:697,63,0
chr10	6679871	.	TA	T	6994.16	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=-16.127;DP=516;FS=6.299;HRun=8;HaplotypeScore=92.4948;InbreedingCoeff=0.9758;MQ=72.25;MQ0=0;MQRankSum=-0.395;QD=24.89;ReadPosRankSum=2.491;VQSLOD=5.3854;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:23:13.17:0,13,160	1/1:1,5:6:12.02:116,12,0	0/0:18,0:16:26.78:0,27,284	0/0:20,1:17:22.86:0,23,223	1/1:2,25:27:65.91:605,66,0	1/1:1,24:25:69.11:666,69,0	1/1:1,13:14:39.06:377,39,0	0/0:25,0:21:44.05:0,44,284	1/1:0,15:15:42.07:406,42,0	1/1:2,23:25:69.09:660,69,0	1/1:1,21:22:57.09:550,57,0	0/0:20,0:20:53.17:0,53,342	0/0:10,0:10:26.62:0,27,181	0/0:16,0:16:41.24:0,41,258	1/1:1,18:19:51.08:492,51,0	1/1:0,13:13:39.06:377,39,0	1/1:2,11:13:33.05:319,33,0	1/1:4,30:34:87.13:840,87,0	1/1:2,16:18:48.08:463,48,0	1/1:0,23:23:63.05:598,63,0	1/1:0,12:13:32.09:296,32,0	1/1:0,3:3:6.01:58,6,0	0/0:20,0:20:50.33:0,50,336	0/0:15,0:15:37.35:0,37,257	1/1:3,8:11:18.02:173,18,0	0/0:27,1:28:44.45:0,44,392	0/0:19,0:19:54.13:0,54,364	0/0:19,0:19:47.50:0,48,340
chr10	6680212	.	G	GA	3719.68	PASS	AB=0.926;AC=24;AF=0.429;AN=56;BaseQRankSum=-1.858;DP=471;FS=1.855;HRun=10;HaplotypeScore=60.2189;InbreedingCoeff=0.6760;MQ=66.25;MQ0=10;MQRankSum=-0.981;QD=15.31;ReadPosRankSum=-0.485;VQSLOD=3.7564;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,12:18:38.59:385,39,0	0/0:5,0:5:11.98:0,12,99	0/1:29,0:11:5.85:6,0,79	0/0:19,0:14:1.43:0,1,96	0/0:23,0:22:53.72:0,54,431	0/0:15,0:15:32.95:0,33,271	0/0:14,0:14:32.95:0,33,271	1/1:6,16:19:48.06:485,48,0	0/0:13,0:13:29.95:0,30,246	0/0:13,0:13:26.94:0,27,222	0/0:18,1:18:14.76:0,15,315	1/1:1,14:15:39.06:404,39,0	1/1:2,7:8:21.05:224,21,0	1/1:2,13:16:20.13:381,20,0	0/1:8,1:10:11.84:12,0,108	0/0:10,0:10:23.97:0,24,197	0/0:28,0:28:39.51:0,40,452	0/1:16,1:16:14.05:14,0,105	0/0:22,0:21:46.73:0,47,387	0/0:20,0:19:53.93:0,54,443	0/0:12,0:12:13.40:0,13,162	0/0:15,0:15:19.28:0,19,273	1/1:6,18:24:3.62:431,4,0	1/1:2,10:12:21.05:224,21,0	0/1:13,2:15:5.04:5,0,170	1/1:7,19:26:19.06:504,19,0	1/1:3,19:22:50.92:535,51,0	1/1:1,4:6:12.33:111,12,0
chr10	6680697	.	T	TA	5463.91	PASS	AB=0.824;AC=42;AF=0.750;AN=56;BaseQRankSum=-0.522;DP=568;FS=7.462;HRun=12;HaplotypeScore=81.8093;InbreedingCoeff=0.7083;MQ=62.75;MQ0=1;MQRankSum=-1.515;QD=11.96;ReadPosRankSum=-1.461;VQSLOD=4.0417;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:9,11:21:14.57:307,0,15	1/1:1,3:13:26.01:163,26,0	0/0:7,0:8:0.96:0,1,93	0/1:11,0:11:16.95:17,0,41	1/1:2,0:27:50.91:280,51,0	1/1:4,24:29:47.04:605,47,0	1/1:2,13:15:17.15:328,17,0	1/1:5,0:8:9.15:54,9,0	1/1:3,17:20:30.05:290,30,0	1/1:6,1:31:51.07:258,51,0	1/1:6,2:22:29.53:163,30,0	0/0:16,0:17:15.37:0,15,203	0/0:16,0:16:32.74:0,33,238	0/0:20,0:22:45.81:0,46,318	1/1:4,18:22:23.16:387,23,0	1/1:3,9:12:24.04:234,24,0	1/1:4,19:25:44.73:402,45,0	1/1:2,2:24:30.33:179,30,0	1/1:5,7:14:23.71:204,24,0	1/1:4,16:20:45.49:405,45,0	1/1:1,1:2:5.96:49,6,0	1/1:4,13:17:6.38:215,6,0	0/0:28,0:28:62.55:0,63,456	0/0:18,0:19:43.75:0,44,312	1/1:4,14:18:8.11:232,8,0	1/1:8,0:27:42.95:224,43,0	1/1:7,0:33:46.13:238,46,0	1/1:5,0:36:45.45:229,45,0
chr10	6681846	.	GAAAAAACAA	G	1107.32	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.941;DP=601;FS=6.194;HRun=0;HaplotypeScore=152.3704;InbreedingCoeff=0.9611;MQ=56.53;MQ0=10;MQRankSum=-6.808;QD=50.33;ReadPosRankSum=-1.497;VQSLOD=2.9858;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,20:21:51.02:1202,51,0	0/0:5,0:5:15.05:0,15,730	0/0:19,0:8:20.88:0,21,649	0/0:15,0:7:14.19:0,14,580	0/0:29,0:29:84.29:0,84,3846	0/0:31,0:31:87.26:0,87,3689	0/0:11,0:11:27.08:0,27,1093	0/0:24,0:23:66.19:0,66,2510	0/0:17,0:17:48.15:0,48,2014	0/0:28,0:28:78.25:0,78,3353	0/0:21,0:21:60.19:0,60,2759	0/0:20,0:20:57.20:0,57,2666	0/0:18,0:18:54.19:0,54,2515	0/0:19,0:19:54.19:0,54,2476	0/0:27,0:27:78.27:0,78,3796	0/0:16,0:16:45.15:0,45,1986	0/0:41,0:41:99:0,117,5007	0/0:29,0:27:78.25:0,78,3488	0/0:28,0:25:66.23:0,66,2815	0/0:27,0:27:78.26:0,78,3607	0/0:12,0:12:36.12:0,36,1730	0/0:23,0:23:69.24:0,69,3079	0/0:21,0:21:60.19:0,60,2650	0/0:21,0:21:57.20:0,57,2577	0/0:19,0:19:54.19:0,54,2469	0/0:18,0:18:54.18:0,54,2357	0/0:29,0:29:84.28:0,84,3773	0/0:11,0:11:33.11:0,33,1597
chr10	6682572	.	GA	G	4333.63	PASS	AB=0.564;AC=19;AF=0.339;AN=56;BaseQRankSum=13.212;DP=578;FS=3.527;HRun=9;HaplotypeScore=60.6378;InbreedingCoeff=0.9100;MQ=56.86;MQ0=3;MQRankSum=1.368;QD=20.25;ReadPosRankSum=-1.139;VQSLOD=4.9598;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,22:24:48.16:510,48,0	0/0:13,0:13:36.11:0,36,415	0/0:9,0:5:14.71:0,15,150	0/0:14,0:5:12.02:0,12,123	0/0:36,0:36:93.27:0,93,1061	0/0:19,0:20:54.16:0,54,623	0/0:12,0:12:27.08:0,27,312	1/1:8,16:21:10.36:339,10,0	0/0:14,0:15:42.11:0,42,475	0/0:25,0:25:69.21:0,69,797	0/0:28,1:29:53.76:0,54,863	1/1:2,13:15:30.02:275,30,0	1/1:3,22:25:59.93:549,60,0	1/1:2,13:15:36.01:330,36,0	0/0:16,0:16:48.13:0,48,544	0/0:17,0:17:48.14:0,48,554	0/0:37,0:36:76.53:0,77,1105	0/0:26,1:28:44.90:0,45,767	0/0:9,0:7:21.06:0,21,242	0/0:32,0:33:93.06:0,93,1020	0/0:11,0:11:30.08:0,30,337	0/0:23,0:23:60.18:0,60,693	1/1:2,23:25:60.02:549,60,0	1/1:2,16:18:39.02:357,39,0	0/0:16,0:16:45.13:0,45,519	0/1:5,17:22:12.21:409,0,12	1/1:2,31:33:75.04:686,75,0	1/1:0,13:13:36.02:330,36,0
chr10	6683413	.	A	ACTGAAGTAG	13318.23	PASS	AC=16;AF=0.296;AN=54;BaseQRankSum=-11.238;DP=566;FS=5.368;HRun=0;HaplotypeScore=144.0323;InbreedingCoeff=0.9927;MQ=56.70;MQ0=2;MQRankSum=-11.834;QD=74.82;ReadPosRankSum=-0.437;VQSLOD=4.1049;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,108,3099	0/0:7,0:7:18.05:0,18,467	0/0:27,0:26:59.50:0,60,1326	0/0:14,0:11:29.69:0,30,636	0/0:16,0:16:39.09:0,39,1015	0/0:10,0:10:24.08:0,24,704	0/0:9,0:9:24.07:0,24,640	1/1:16,14:30:66.22:2328,66,0	0/0:21,0:21:63.21:0,63,1757	0/0:29,0:29:72.23:0,72,1932	0/0:14,0:14:36.12:0,36,993	1/1:2,17:22:30.10:1414,30,0	1/1:3,10:16:27.09:1194,27,0	1/1:2,20:23:48.16:2262,48,0	0/0:14,0:14:39.11:0,39,1019	0/0:20,0:20:45.15:0,45,1298	0/0:37,0:37:90.21:0,90,2352	0/0:24,0:23:57.17:0,57,1547	0/0:20,0:17:48.14:0,48,1161	0/0:16,0:16:42.13:0,42,1132	0/0:30,0:30:75.24:0,75,2063	0/0:19,0:19:54.17:0,54,1491	1/1:2,14:17:30.10:1414,30,0	1/1:4,12:16:12.51:488,13,0	0/0:16,0:16:42.14:0,42,1169	1/1:7,15:22:57.18:2175,57,0	1/1:4,18:21:45.15:2043,45,0	./.
chr10	6683963	.	TAAAAAAAAACAAAAACAAAAAAACA	T	4274.61	PASS	AB=0.714;AC=7;AF=0.125;AN=56;BaseQRankSum=6.414;DP=427;FS=10.620;HRun=0;HaplotypeScore=212.1730;InbreedingCoeff=0.7792;MQ=57.86;MQ0=15;MQRankSum=-6.524;QD=73.70;ReadPosRankSum=1.834;VQSLOD=3.4512;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:13:30.10:0,30,2387	0/0:6,0:6:18.06:0,18,1709	0/0:36,0:10:23.34:0,23,654	0/0:26,0:6:18.04:0,18,441	0/0:16,0:16:45.15:0,45,3907	0/0:15,0:14:39.13:0,39,3501	0/0:6,0:6:6.02:0,6,426	1/1:13,0:10:21.01:378,21,0	0/0:13,0:14:36.12:0,36,2379	0/0:18,0:18:51.15:0,51,3741	0/0:9,0:9:27.09:0,27,3002	0/0:6,0:6:18.06:0,18,1433	0/0:18,0:18:48.16:0,48,3462	0/0:6,0:5:12.04:0,12,739	0/0:16,0:14:27.09:0,27,1951	0/0:16,0:16:30.09:0,30,1902	0/0:25,0:22:54.08:0,54,3907	0/0:31,0:29:60.15:0,60,4740	0/0:23,0:18:42.14:0,42,3147	0/0:11,0:11:33.11:0,33,2567	0/0:15,0:13:39.12:0,39,2712	0/0:4,0:4:11.99:0,12,966	0/0:13,0:11:33.11:0,33,2456	0/0:15,0:13:27.09:0,27,1609	0/0:8,0:8:15.05:0,15,809	1/1:4,12:15:30.06:1219,30,0	1/1:1,21:24:39.13:2303,39,0	0/1:3,2:5:99:374,0,461
chr10	6683969	.	AAAAC	A	774.37	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=7.649;DP=423;FS=14.471;HRun=0;HaplotypeScore=92.4460;InbreedingCoeff=0.9260;MQ=58.21;MQ0=17;MQRankSum=-7.700;QD=14.34;ReadPosRankSum=0.899;VQSLOD=1.9326;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:13:18.11:0,18,661	0/0:6,0:6:18.06:0,18,400	0/0:38,0:11:13.14:0,13,313	0/0:29,0:6:15.05:0,15,239	0/0:15,0:15:45.15:0,45,1046	0/0:17,0:16:39.66:0,40,960	0/0:5,0:5:8.95:0,9,164	1/1:2,7:8:21.01:296,21,0	0/0:13,0:13:36.12:0,36,754	0/0:22,0:21:60.17:0,60,1277	0/0:9,0:9:27.09:0,27,664	0/0:6,0:6:18.06:0,18,375	0/0:18,0:18:48.16:0,48,1012	0/0:7,0:6:12.04:0,12,285	0/0:14,0:13:27.09:0,27,610	0/0:15,0:15:30.08:0,30,637	0/0:22,0:20:54.08:0,54,1129	0/0:29,0:27:63.16:0,63,1372	0/0:22,0:18:45.14:0,45,977	0/0:11,0:11:33.11:0,33,792	0/0:17,0:15:45.14:0,45,908	0/0:4,0:4:11.99:0,12,240	0/0:12,0:11:33.11:0,33,769	0/0:13,0:12:27.09:0,27,549	0/0:10,0:10:18.06:0,18,379	1/1:16,0:15:24.02:278,24,0	1/1:24,0:23:35.85:286,36,0	1/1:5,0:5:8.26:68,8,0
chr10	6683987	.	C	CAA	3460.04	PASS	AB=1.000;AC=26;AF=0.464;AN=56;BaseQRankSum=-3.661;DP=435;FS=0.000;HRun=12;HaplotypeScore=74.4083;InbreedingCoeff=0.7352;MQ=57.48;MQ0=18;MQRankSum=0.776;QD=14.79;ReadPosRankSum=-4.542;VQSLOD=1.3933;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:12,1:17:42.44:392,42,0	0/0:5,0:5:15.02:0,15,139	0/0:38,0:11:2.46:0,2,66	0/1:31,0:6:0.02:0,0,0	0/0:18,0:19:34.77:0,35,361	1/1:9,9:18:40.35:504,40,0	1/1:3,7:10:12.04:167,12,0	0/1:1,0:1:0:0,0,0	1/1:2,10:13:18.06:252,18,0	0/0:20,0:22:21.33:0,21,293	0/0:17,0:17:51.02:0,51,461	0/0:1,0:7:13.71:0,14,59	0/0:2,0:20:36.18:0,36,154	0/0:1,0:6:5.95:0,6,25	1/1:1,11:13:8.56:285,9,0	1/1:3,11:16:11.53:135,12,0	1/1:9,8:15:35.70:456,36,0	0/0:22,0:21:23.89:0,24,317	1/1:8,20:26:60.60:690,61,0	1/1:1,10:11:23.82:260,24,0	0/0:13,0:14:23.66:0,24,206	1/1:0,3:4:9.03:126,9,0	0/0:0,0:12:27.45:0,27,118	0/1:3,0:13:2.37:2,0,42	1/1:2,11:13:12.03:154,12,0	0/0:13,0:11:11.72:0,12,56	0/1:23,0:22:37.33:37,0,59	0/0:5,0:5:5.14:0,5,27
chr10	6684871	.	TCACACACACA	T	1491.88	PASS	AB=0.830;AC=14;AF=0.280;AN=50;BaseQRankSum=2.660;DP=422;FS=10.470;HRun=0;HaplotypeScore=133.4535;InbreedingCoeff=0.2473;MQ=70.47;MQ0=14;MQRankSum=-3.069;QD=10.66;ReadPosRankSum=-0.042;VQSLOD=2.0930;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:24:11.40:0,11,173	1/1:4,4:8:12.04:284,12,0	./.	0/0:32,0:21:0:0,0,0	0/1:10,11:21:9.83:242,0,10	0/0:7,0:10:6.02:0,6,223	0/0:11,0:18:14.60:0,15,441	0/0:15,0:15:1.48:0,1,4	0/0:7,0:8:11.94:0,12,382	1/1:10,5:15:12.04:234,12,0	./.	1/1:8,0:9:3.01:70,3,0	1/1:6,0:12:0.43:316,0,0	0/1:8,0:14:17.25:194,0,17	0/0:8,0:11:12.04:0,12,418	0/0:9,0:9:6.02:0,6,280	0/0:12,0:20:21.02:0,21,673	0/1:14,1:15:42.67:264,0,43	0/0:7,0:7:12.04:0,12,205	0/0:16,0:16:5.76:0,6,113	./.	0/0:12,0:12:3.01:0,3,56	0/1:9,0:14:5.86:6,0,10	0/1:15,0:15:0:0,0,0	0/0:6,0:12:6.02:0,6,108	0/0:10,0:10:8.37:0,8,63	0/1:16,0:16:21.60:22,0,182	0/0:5,0:5:6.01:0,6,60
chr10	6684909	.	ACAC	A	51.16	PASS	AB=0.922;AC=5;AF=0.089;AN=56;BaseQRankSum=7.678;DP=474;FS=0.797;HRun=0;HaplotypeScore=115.9170;InbreedingCoeff=-0.0933;MQ=51.11;MQ0=19;MQRankSum=-6.133;QD=0.79;ReadPosRankSum=6.002;VQSLOD=1.0832;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:42.08:0,42,509	0/1:8,0:8:5.37:5,0,172	0/0:19,0:10:27.56:0,28,341	0/0:21,0:13:23.54:0,24,387	0/0:29,0:28:43.44:0,43,695	0/0:13,0:12:24:0,24,390	0/0:18,0:18:32.65:0,33,521	0/0:20,0:19:50.31:0,50,387	0/0:20,0:20:36.40:0,36,593	0/0:23,0:22:43.92:0,44,610	0/0:15,0:14:24.08:0,24,302	0/0:14,0:13:23.65:0,24,433	0/1:13,0:13:36.09:36,0,151	0/1:17,0:17:7.60:8,0,324	0/0:11,0:11:24.08:0,24,413	0/0:10,0:10:21.07:0,21,318	0/0:26,0:26:48.13:0,48,719	0/0:18,0:17:16.20:0,16,426	0/0:15,0:15:45.11:0,45,600	0/0:27,0:27:51.16:0,51,668	0/0:21,0:18:15.52:0,16,189	0/0:10,0:10:18.06:0,18,242	0/0:16,0:16:26.57:0,27,319	0/0:13,0:13:18.02:0,18,226	0/0:14,0:14:21.07:0,21,295	0/0:14,1:15:15.08:0,15,210	0/1:11,5:15:80.05:80,0,83	0/1:9,2:10:31.22:31,0,89
chr10	6684930	.	CA	C	1657.39	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=6.403;DP=462;FS=12.443;HRun=6;HaplotypeScore=86.9487;InbreedingCoeff=0.9957;MQ=58.73;MQ0=8;MQRankSum=-4.754;QD=25.50;ReadPosRankSum=2.475;VQSLOD=2.9908;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:48.16:0,48,625	0/0:11,0:11:33.09:0,33,414	0/0:18,0:11:24.08:0,24,308	0/0:26,0:18:34.80:0,35,473	0/0:27,0:27:72.15:0,72,902	0/0:14,0:14:39.13:0,39,513	0/0:15,0:15:33.57:0,34,422	0/0:22,0:22:57.18:0,57,736	0/0:18,0:18:51.17:0,51,671	0/0:23,0:22:63.20:0,63,815	0/0:18,0:18:45.15:0,45,592	1/1:1,16:16:42.11:451,42,0	1/1:0,10:10:30.07:321,30,0	1/1:0,12:12:36.09:386,36,0	0/0:7,0:7:18.06:0,18,237	0/0:12,0:12:30.09:0,30,381	0/0:18,0:18:45.15:0,45,587	0/0:11,0:11:30.10:0,30,395	0/0:14,0:14:36.58:0,37,464	0/0:30,0:30:84.27:0,84,1095	0/0:14,0:14:24.08:0,24,309	0/0:12,0:12:27.09:0,27,348	1/1:0,14:14:39.10:419,39,0	1/1:1,11:12:23.75:255,24,0	0/0:20,0:20:39.13:0,39,513	0/0:14,0:14:39.13:0,39,511	0/0:16,0:14:33.09:0,33,407	0/0:16,0:15:42.14:0,42,549
chr10	6686043	.	C	CA	3534.89	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-11.539;DP=548;FS=13.550;HRun=0;HaplotypeScore=108.4641;InbreedingCoeff=0.9350;MQ=76.22;MQ0=8;MQRankSum=-0.629;QD=33.67;ReadPosRankSum=4.635;VQSLOD=2.1520;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:69.14:0,69,791	0/0:13,0:13:31.12:0,31,322	0/0:29,0:25:75.04:0,75,855	0/0:32,0:30:84.06:0,84,986	0/0:14,0:14:35.99:0,36,361	0/0:10,0:10:30.05:0,30,339	0/0:26,0:26:64.54:0,65,769	0/0:22,0:22:0.66:0,1,182	0/0:22,0:22:66.20:0,66,829	0/0:20,0:20:41.04:0,41,463	0/0:16,0:16:39.73:0,40,399	1/1:1,15:15:30.49:501,30,0	1/1:0,17:17:30.10:459,30,0	1/1:2,16:17:12.48:604,12,0	0/0:12,0:12:36.07:0,36,422	0/0:13,0:13:36.53:0,37,422	0/0:17,0:17:46.03:0,46,585	0/0:21,0:21:62.12:0,62,664	0/0:18,0:18:54.09:0,54,630	0/0:20,0:19:57.08:0,57,714	0/0:25,0:25:70.07:0,70,748	0/0:22,0:22:66.06:0,66,790	1/1:0,28:25:66.22:1009,66,0	1/1:0,26:25:63.21:962,63,0	0/0:19,0:19:55.38:0,55,671	0/0:21,0:20:38.16:0,38,331	0/0:20,0:19:39.21:0,39,252	0/0:5,0:5:14.88:0,15,105
chr10	6686044	.	CACA	C	3078.87	PASS	AB=0.937;AC=14;AF=0.250;AN=56;BaseQRankSum=-7.427;DP=540;FS=0.905;HRun=0;HaplotypeScore=125.2988;InbreedingCoeff=0.4241;MQ=74.22;MQ0=8;MQRankSum=-1.673;QD=18.01;ReadPosRankSum=-5.091;VQSLOD=2.2337;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:61.84:0,62,703	0/1:11,0:12:29.65:30,0,40	0/0:29,0:24:71.40:0,71,1144	0/0:32,0:28:82.98:0,83,1419	0/1:12,0:12:32.21:32,0,41	0/0:10,0:10:24.27:0,24,253	0/0:28,0:28:37.65:0,38,682	1/1:0,20:22:63.21:1026,63,0	0/0:22,0:22:62.12:0,62,830	0/1:16,0:19:49.83:101,0,50	0/1:16,0:16:49.78:50,0,71	0/0:16,0:15:36.12:0,36,611	0/0:17,0:17:30.10:0,30,520	0/0:18,0:17:48.12:0,48,810	0/0:12,0:12:28.04:0,28,337	0/0:12,0:13:29.84:0,30,413	0/0:17,0:17:25.67:0,26,571	0/1:19,0:21:77.56:78,0,87	0/0:19,0:19:45.87:0,46,543	0/0:18,0:19:30.16:0,30,717	0/1:21,1:23:51.61:52,0,120	0/0:23,0:23:33.83:0,34,762	0/0:27,0:24:66.23:0,66,1140	0/0:25,0:24:63.20:0,63,1038	0/0:19,0:19:32.55:0,33,611	1/1:1,19:20:48.16:853,48,0	1/1:1,19:19:42.14:782,42,0	1/1:0,4:5:15.05:256,15,0
chr10	6687190	.	AG	A	2902.87	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=9.634;DP=685;FS=8.195;HRun=2;HaplotypeScore=67.2952;InbreedingCoeff=0.9955;MQ=81.66;MQ0=1;MQRankSum=0.232;QD=33.37;ReadPosRankSum=-0.290;VQSLOD=3.2163;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:96.31:0,96,1416	0/0:16,0:16:48.16:0,48,717	0/0:21,0:21:54.18:0,54,803	0/0:19,0:19:54.13:0,54,718	0/0:30,0:30:87.29:0,87,1303	0/0:22,0:22:66.21:0,66,969	0/0:18,0:18:54.18:0,54,809	1/1:0,29:29:87.24:1075,87,0	0/0:25,0:25:75.25:0,75,1119	0/0:19,0:19:54.18:0,54,794	0/0:26,0:26:75.25:0,75,1121	0/0:28,0:28:84.26:0,84,1220	0/0:25,0:25:72.21:0,72,1052	0/0:25,0:25:75.24:0,75,1101	0/0:28,0:28:81.27:0,81,1214	0/0:13,0:13:36.12:0,36,539	0/0:30,0:30:90.30:0,90,1347	0/0:23,0:23:69.23:0,69,1034	0/0:28,0:28:81.25:0,81,1173	0/0:31,0:31:87.28:0,87,1280	0/0:28,0:27:75.24:0,75,1103	0/0:26,0:26:78.25:0,78,1149	0/0:30,0:30:87.27:0,87,1260	0/0:26,0:26:78.25:0,78,1145	0/0:29,0:29:81.27:0,81,1213	1/1:1,24:25:72.23:935,72,0	1/1:0,27:27:66.21:857,66,0	1/1:0,6:6:15.05:195,15,0
chr10	6687728	.	C	CTGTCTG	3042.15	PASS	AB=1.000;AC=26;AF=0.481;AN=54;BaseQRankSum=-3.957;DP=559;FS=0.429;HRun=0;HaplotypeScore=144.7102;InbreedingCoeff=0.3863;MQ=61.72;MQ0=25;MQRankSum=-0.147;QD=8.67;ReadPosRankSum=-0.441;VQSLOD=2.3553;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:35:48.38:343,0,48	0/1:9,0:9:1.78:89,0,2	0/0:37,0:26:64.83:0,65,647	0/0:38,0:18:41.39:0,41,464	0/1:19,0:18:4.45:4,0,72	./.	1/1:18,0:15:35.95:345,36,0	0/0:20,0:18:36.73:0,37,305	1/1:16,0:18:23.88:184,24,0	0/1:21,0:20:25.16:342,0,25	0/1:15,0:16:57.79:79,0,58	0/0:10,0:14:8.75:0,9,93	0/0:13,0:20:40.41:0,40,405	0/0:5,0:12:14.95:0,15,166	1/1:30,0:28:23.84:183,24,0	1/1:18,0:17:20.81:204,21,0	1/1:20,0:18:18.68:315,19,0	0/1:20,0:20:99:118,0,221	1/1:21,0:20:35.36:448,35,0	1/1:19,0:18:3.46:24,3,0	0/1:25,0:25:0.70:270,0,1	1/1:24,0:21:0.21:34,0,0	0/0:5,0:6:6:0,6,74	0/0:13,0:13:23.50:0,24,186	1/1:3,9:11:6.01:132,6,0	0/1:20,0:20:99:115,0,212	0/0:18,0:25:36.36:0,36,340	0/0:8,0:7:17.92:0,18,136
chr10	6687730	.	G	GTC	2524.48	PASS	AB=0.917;AC=23;AF=0.426;AN=54;BaseQRankSum=-4.644;DP=566;FS=7.902;HRun=0;HaplotypeScore=115.9854;InbreedingCoeff=0.1728;MQ=58.71;MQ0=26;MQRankSum=0.843;QD=6.95;ReadPosRankSum=3.073;VQSLOD=2.3617;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:36,0:35:26.23:377,26,0	1/1:10,0:10:11.44:101,11,0	0/0:36,0:25:64.57:0,65,632	0/0:36,0:16:41.44:0,41,464	0/1:8,12:19:42.73:44,0,43	./.	1/1:17,1:15:35.94:308,36,0	0/0:24,0:21:38.44:0,38,311	1/1:20,0:18:23.88:184,24,0	1/1:21,0:20:24.87:367,25,0	0/1:18,0:17:21.94:79,0,22	0/0:14,0:14:8.94:0,9,65	0/0:19,0:19:40.27:0,40,266	0/0:12,0:12:14.89:0,15,110	0/1:28,2:28:17.86:131,0,18	0/1:17,1:17:16.01:137,0,16	0/1:20,0:18:23.52:216,0,24	0/1:19,0:19:84:114,0,84	0/1:22,1:21:21.64:279,0,22	0/0:4,15:18:6.22:0,6,48	1/1:27,0:27:22.30:299,22,0	0/1:9,13:21:3.11:3,0,77	0/0:7,0:6:8.90:0,9,63	0/0:14,0:14:23.70:0,24,186	0/1:12,0:10:18.92:29,0,19	0/1:20,0:19:4.85:5,0,233	0/1:27,0:27:33.42:33,0,261	0/0:8,0:7:17.92:0,18,136
chr10	6690338	.	CA	C	744.30	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=0.638;DP=361;FS=4.579;HRun=1;HaplotypeScore=45.2671;InbreedingCoeff=0.7939;MQ=80.69;MQ0=0;MQRankSum=-0.759;QD=35.44;ReadPosRankSum=1.284;VQSLOD=3.4465;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,21:21:60.20:839,60,0	0/0:7,0:7:21.06:0,21,313	0/0:13,0:13:34.79:0,35,527	0/0:5,0:5:15.05:0,15,208	0/0:13,0:13:36.12:0,36,573	0/0:17,0:17:51.16:0,51,792	0/0:11,0:11:33.10:0,33,495	0/0:25,0:25:75.25:0,75,1171	0/0:7,0:7:21.07:0,21,336	0/0:19,0:19:57.19:0,57,912	0/0:13,0:13:39.11:0,39,576	0/0:13,0:13:39.12:0,39,600	0/0:10,0:9:27.09:0,27,424	0/0:10,0:10:30.10:0,30,480	0/0:7,0:7:21.07:0,21,336	0/0:7,0:7:21.07:0,21,328	0/0:12,0:12:36.12:0,36,575	0/0:29,0:29:84.29:0,84,1333	0/0:14,0:14:42.14:0,42,671	0/0:13,0:13:39.13:0,39,623	0/0:3,0:3:9.03:0,9,144	0/0:2,0:2:6.02:0,6,96	0/0:10,0:10:26.86:0,27,431	0/0:4,0:4:9.03:0,9,144	0/0:17,0:17:51.17:0,51,815	0/0:22,0:22:63.17:0,63,979	0/0:24,0:24:72.21:0,72,1103	0/0:13,0:13:39.12:0,39,599
chr10	6691874	.	CAT	C	403.58	PASS	AB=0.866;AC=17;AF=0.304;AN=56;BaseQRankSum=6.833;DP=491;FS=55.493;HRun=0;HaplotypeScore=201.9403;InbreedingCoeff=-0.2467;MQ=41.01;MQ0=1;MQRankSum=-6.792;QD=1.20;ReadPosRankSum=3.054;VQSLOD=0.8148;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:28,1:29:4.15:4,0,163	0/1:6,2:7:9.12:27,0,9	0/0:12,0:4:8.55:0,9,53	0/0:5,0:3:2.90:0,3,118	0/1:6,12:18:24.09:24,0,45	0/1:15,3:18:12.24:12,0,96	0/1:21,2:23:27.15:27,0,107	0/0:19,0:18:42.11:0,42,659	0/1:42,4:46:55.48:55,0,132	0/1:27,20:46:99:182,0,876	1/1:8,4:12:6.74:30,7,0	0/0:12,0:11:11.55:0,12,84	0/0:3,0:3:3.01:0,3,57	0/0:11,0:11:6.01:0,6,83	0/1:32,3:35:89.89:90,0,101	0/1:29,2:31:24.12:24,0,92	0/1:11,1:12:8.64:24,0,9	0/0:6,0:6:14.94:0,15,196	0/0:13,1:10:4.89:0,5,226	0/1:11,2:13:0.72:1,0,98	0/0:33,0:33:30.30:0,30,378	0/1:14,4:17:12.04:22,0,12	0/0:12,0:12:2.34:0,2,24	0/0:8,0:8:5.98:0,6,76	0/0:19,0:19:5.99:0,6,182	0/1:17,2:19:15.30:15,0,629	0/1:5,1:6:11.65:12,0,14	0/1:2,0:2:0:0,0,0
chr10	6691940	.	G	GCA	3643.66	PASS	AB=0.791;AC=14;AF=0.250;AN=56;BaseQRankSum=6.473;DP=1066;FS=68.433;HRun=0;HaplotypeScore=510.2253;InbreedingCoeff=0.5287;MQ=48.56;MQ0=6;MQRankSum=-8.395;QD=18.59;ReadPosRankSum=-3.882;VQSLOD=0.3197;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:91.45:0,91,1260	0/0:25,0:24:5.05:0,5,497	0/0:26,0:10:20.59:0,21,242	0/0:33,0:18:9.19:0,9,103	0/0:50,0:49:50.80:0,51,954	0/0:26,0:26:28.02:0,28,597	0/0:38,0:38:72.23:0,72,935	0/1:33,8:37:99:411,0,435	0/0:69,0:69:99:0,118,1590	0/0:75,0:74:99:0,125,1887	0/0:47,0:47:57.69:0,58,791	1/1:1,16:15:27.01:384,27,0	1/1:1,11:12:24.08:407,24,0	1/1:2,23:25:33.11:560,33,0	0/0:69,0:69:99:0,152,1985	0/0:59,0:59:99:0,118,1560	0/0:28,0:28:62.33:0,62,861	0/0:23,0:24:32.30:0,32,692	0/0:15,0:14:6.50:0,6,256	0/0:54,0:54:95.53:0,96,1357	0/0:90,0:91:99:0,210,2650	0/0:46,0:45:71.18:0,71,873	1/1:14,17:31:0.50:474,1,0	1/1:1,12:13:20.76:356,21,0	0/0:41,0:41:73.59:0,74,873	0/1:19,17:36:97.12:868,0,97	0/1:5,6:11:12.72:153,0,13	0/1:10,0:10:29.34:29,0,100
chr10	6691994	.	G	GCA	747.72	PASS	AB=0.839;AC=12;AF=0.214;AN=56;BaseQRankSum=3.224;DP=1074;FS=21.155;HRun=0;HaplotypeScore=371.4672;InbreedingCoeff=0.4515;MQ=47.85;MQ0=8;MQRankSum=-6.800;QD=4.53;ReadPosRankSum=-5.218;VQSLOD=1.1080;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:53:90.29:0,90,1170	0/0:17,0:17:36.12:0,36,468	0/0:53,0:33:70.86:0,71,776	0/0:48,0:28:58.14:0,58,804	0/0:42,0:42:52.92:0,53,846	0/0:27,0:26:57.19:0,57,741	0/0:46,0:46:76.11:0,76,963	0/1:46,16:52:99:617,0,1176	0/0:64,0:64:99:0,123,1565	0/0:70,0:70:99:0,157,1920	0/0:46,0:46:75.81:0,76,1000	1/1:2,3:4:3.01:51,3,0	1/1:4,2:6:6.02:100,6,0	0/1:3,3:6:0:0,0,0	0/0:55,0:55:99:0,114,1430	0/0:45,0:45:70.58:0,71,1010	0/0:35,0:35:75.23:0,75,959	0/0:20,0:20:53.66:0,54,672	0/0:23,0:19:51.11:0,51,631	0/0:54,0:54:99:0,129,1610	0/0:118,0:118:99:0,283,3595	0/0:41,0:41:62:0,62,772	1/1:14,2:16:0.46:1,0,0	1/1:7,5:12:2.94:51,3,0	0/0:37,0:37:66.59:0,67,789	0/1:40,2:42:47.07:47,0,953	0/1:15,1:16:13.61:14,0,380	0/0:10,0:10:9.50:0,10,222
chr10	6692007	.	T	TCA	3776.55	PASS	AB=0.646;AC=11;AF=0.196;AN=56;BaseQRankSum=-4.800;DP=1060;FS=10.570;HRun=0;HaplotypeScore=335.5878;InbreedingCoeff=0.4171;MQ=49.67;MQ0=13;MQRankSum=-3.495;QD=21.22;ReadPosRankSum=-3.048;VQSLOD=2.0692;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:54:99:0,102,1356	0/0:15,0:15:36.04:0,36,458	0/0:46,2:35:61.15:0,61,923	0/0:39,2:27:56.36:0,56,669	0/0:42,0:42:71.51:0,72,954	0/0:27,0:26:57.17:0,57,744	0/0:43,0:43:90.08:0,90,1128	0/1:49,19:55:99:1500,0,423	0/0:55,0:55:99:0,111,1472	0/0:68,0:68:68.17:0,68,1791	0/0:43,0:43:86.60:0,87,1127	1/1:2,5:6:3.01:38,3,0	1/1:1,6:7:8.99:123,9,0	0/1:2,6:8:0:0,0,0	0/0:51,0:51:96.31:0,96,1272	0/0:45,0:45:71.03:0,71,1026	0/0:31,0:31:81.20:0,81,1076	0/0:22,0:22:57.02:0,57,728	0/0:30,0:27:37.25:0,37,753	0/0:51,0:51:99:0,129,1685	0/0:122,2:122:99:0,295,3876	0/0:36,0:36:63.66:0,64,841	0/0:10,3:14:1.24:0,1,4	0/1:7,8:15:5.11:47,0,5	0/0:34,0:36:17.65:0,18,677	0/1:22,21:43:99:1186,0,149	0/1:3,12:16:11.85:534,0,12	1/1:6,7:11:2.10:348,2,0
chr10	6692048	.	GCA	G	2210.37	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=10.791;DP=1033;FS=20.018;HRun=0;HaplotypeScore=253.7933;InbreedingCoeff=0.9318;MQ=50.71;MQ0=10;MQRankSum=-1.261;QD=17.54;ReadPosRankSum=-1.693;VQSLOD=2.2018;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,35:44:90.29:1145,90,0	0/0:14,0:13:30.10:0,30,501	0/0:56,0:32:48.22:0,48,777	0/0:44,0:22:42.34:0,42,552	0/0:47,0:47:90.18:0,90,1479	0/0:24,0:23:48.08:0,48,803	0/0:48,0:48:64.07:0,64,1550	0/0:51,0:45:99:0,102,1861	0/0:55,0:55:99:0,111,1823	0/0:52,1:53:94.32:0,94,2092	0/0:33,0:33:57.02:0,57,947	1/1:0,9:9:8.99:96,9,0	1/1:1,15:16:39.12:492,39,0	1/1:2,20:22:36.12:457,36,0	0/0:43,1:44:35.07:0,35,1625	0/0:37,0:37:81.27:0,81,1336	0/0:33,0:33:69.71:0,70,1146	0/0:25,0:25:60.20:0,60,985	0/0:21,1:20:9.96:0,10,715	0/0:50,0:50:99:0,120,1887	0/0:133,0:133:99:0,310,5106	0/0:29,0:29:53.94:0,54,850	1/1:5,12:17:13.52:188,14,0	1/1:6,10:16:0.33:2,0,0	0/0:25,0:25:48.16:0,48,802	0/0:38,0:41:65.84:0,66,1495	0/0:24,0:25:33.99:0,34,737	0/0:17,0:14:30.10:0,30,491
chr10	6692083	.	ATACACACACT	A	2859.09	PASS	AB=1.000;AC=12;AF=0.214;AN=56;BaseQRankSum=9.467;DP=1094;FS=68.198;HRun=0;HaplotypeScore=381.3608;InbreedingCoeff=0.7469;MQ=49.42;MQ0=16;MQRankSum=-7.271;QD=16.15;ReadPosRankSum=1.319;VQSLOD=-0.2998;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,105,4436	0/0:26,0:25:72.02:0,72,2765	0/0:44,0:12:24.05:0,24,674	0/0:48,0:30:62.12:0,62,2140	0/0:46,0:46:99:0,103,3378	0/0:23,0:23:60.01:0,60,2472	0/0:49,0:49:99:0,129,5638	0/0:59,0:56:99:0,135,4885	0/0:54,0:54:99:0,150,6726	0/0:61,0:61:96.29:0,96,6726	0/0:33,0:33:77.72:0,78,2421	1/1:7,5:12:9.03:280,9,0	1/1:8,14:23:33.16:1117,33,0	1/1:6,31:37:38.59:1169,39,0	0/0:53,0:53:99:0,153,6801	0/0:42,0:42:99:0,117,5074	0/0:28,0:28:81.22:0,81,3271	0/1:28,0:28:11.59:12,0,2818	0/0:31,0:28:63.20:0,63,2592	0/0:35,0:35:83.93:0,84,2856	0/0:133,0:132:99:0,313,13670	0/0:27,0:27:59.58:0,60,1943	1/1:11,8:19:14.76:388,15,0	1/1:12,4:16:5.04:35,5,0	0/0:24,0:24:47.93:0,48,1609	0/1:41,0:41:31.01:31,0,4512	0/0:32,0:32:84.20:0,84,3856	0/0:24,0:21:63.22:0,63,2955
chr10	6692085	.	ACACACACT	A	1445.37	PASS	AB=0.964;AC=11;AF=0.196;AN=56;BaseQRankSum=10.015;DP=1092;FS=68.769;HRun=0;HaplotypeScore=348.0805;InbreedingCoeff=0.8469;MQ=49.45;MQ0=16;MQRankSum=-8.151;QD=10.63;ReadPosRankSum=2.820;VQSLOD=-0.1511;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,120,4664	0/0:27,0:26:78.01:0,78,2690	0/0:45,0:12:30.04:0,30,884	0/0:48,0:29:82.59:0,83,2608	0/0:44,0:44:99:0,105,3438	0/0:22,0:22:60.09:0,60,2417	0/0:50,0:50:99:0,144,5646	0/0:60,0:57:99:0,168,5945	0/0:55,0:55:99:0,162,6475	0/0:62,0:62:99:0,146,6768	0/0:33,0:33:77.88:0,78,2426	1/1:12,0:12:9.03:157,9,0	1/1:23,0:23:15.30:608,15,0	1/1:37,0:37:38.47:643,38,0	0/0:53,0:53:99:0,156,6494	0/0:43,0:43:99:0,126,5105	0/0:29,0:29:87.28:0,87,3386	0/1:26,1:27:4.24:4,0,2790	0/0:27,0:25:66.22:0,66,2735	0/0:32,0:32:93.07:0,93,3007	0/0:128,0:127:99:0,337,13655	0/0:25,1:26:62.69:0,63,2035	1/1:19,0:19:14.40:184,14,0	1/1:17,0:17:1.86:7,2,0	0/0:21,2:23:57.02:0,57,1641	0/0:44,0:44:30.93:0,31,4682	0/0:32,0:32:90.15:0,90,3592	0/0:24,0:21:63.22:0,63,2828
chr10	6693672	.	GACACAGAC	G	2571.17	PASS	AB=1.000;AC=20;AF=0.357;AN=56;BaseQRankSum=11.077;DP=559;FS=12.688;HRun=0;HaplotypeScore=160.4998;InbreedingCoeff=0.0673;MQ=58.69;MQ0=23;MQRankSum=-3.268;QD=8.84;ReadPosRankSum=5.045;VQSLOD=1.5460;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:31:58.83:0,59,1229	0/1:5,0:5:45.95:46,0,64	0/0:31,0:17:15.46:0,15,228	0/0:35,0:24:43.35:0,43,456	0/0:19,0:18:23.79:0,24,183	0/1:15,0:15:56.52:57,0,120	0/0:27,0:26:32.46:0,32,358	1/1:22,0:21:50.61:386,51,0	0/1:23,0:23:99:109,0,124	0/1:18,0:17:31.77:32,0,116	0/1:14,0:14:2.39:2,0,85	0/1:13,0:10:63.85:64,0,76	0/1:13,0:13:44.10:44,0,119	0/0:10,0:10:17.98:0,18,150	0/1:29,0:27:17.18:17,0,261	0/0:17,0:17:12.16:0,12,169	0/1:17,0:14:30.72:31,0,151	0/1:17,0:18:50.96:98,0,51	0/1:17,0:15:18.71:19,0,212	0/0:15,0:14:23.92:0,24,193	0/1:31,0:27:83.76:84,0,207	0/0:13,0:13:6.01:0,6,74	0/0:16,0:15:11.97:0,12,97	0/0:28,0:28:23.48:0,23,193	0/0:25,0:25:26.98:0,27,241	1/1:24,4:25:54.27:884,54,0	1/1:16,3:18:34.97:492,35,0	1/1:4,4:8:21.88:389,22,0
chr10	6693678	.	GACACAC	G	3695.11	PASS	AB=0.877;AC=32;AF=0.762;AN=42;BaseQRankSum=-3.593;DP=542;FS=15.620;HRun=0;HaplotypeScore=137.4527;InbreedingCoeff=0.1442;MQ=54.05;MQ0=27;MQRankSum=3.086;QD=10.41;ReadPosRankSum=6.298;VQSLOD=1.3165;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:31:32.58:0,33,622	1/1:3,0:5:5.99:73,6,0	./.	./.	0/1:9,9:19:12:12,0,17	1/1:15,0:15:9.03:174,9,0	1/1:18,10:27:3.01:51,3,0	0/0:23,0:22:21.76:0,22,127	1/1:20,0:20:2.84:322,3,0	1/1:8,9:16:18.42:349,18,0	1/1:5,10:15:2.91:51,3,0	1/1:11,0:10:6.02:81,6,0	1/1:7,0:12:6:70,6,0	./.	1/1:22,0:23:18.06:353,18,0	0/1:13,0:17:3.65:82,0,4	1/1:16,0:14:18.06:325,18,0	0/1:16,0:17:3.82:476,0,4	1/1:13,3:14:8.90:117,9,0	./.	0/1:26,0:25:6.32:565,0,6	./.	./.	1/1:18,0:28:0.47:1,0,0	./.	0/1:32,0:27:61.22:281,0,61	0/1:19,0:18:11.86:140,0,12	1/1:8,0:8:12.04:172,12,0
chr10	6693710	.	CACAGAGAGAGAGAGAG	C	1233.41	PASS	AB=1.000;AC=24;AF=0.545;AN=44;BaseQRankSum=0.816;DP=399;FS=11.671;HRun=0;HaplotypeScore=157.0520;InbreedingCoeff=-0.1639;MQ=42.34;MQ0=21;MQRankSum=0.199;QD=4.04;ReadPosRankSum=-1.662;VQSLOD=1.8418;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:28:39.66:0,40,1051	0/1:5,0:5:0.80:1,0,125	./.	./.	0/0:17,0:16:6.02:0,6,405	0/1:13,0:12:17.12:17,0,388	0/1:19,0:18:7.90:8,0,305	1/1:30,0:30:11.75:127,12,0	0/1:19,0:19:14.67:15,0,616	0/1:18,0:18:15.11:15,0,1595	1/1:11,0:11:2.91:17,3,0	0/1:8,0:5:2.82:10,0,3	0/1:10,0:9:6.38:6,0,13	0/0:5,0:5:3.01:0,3,174	0/1:16,0:14:49.14:49,0,67	0/1:12,0:12:1.34:1,0,354	0/1:14,0:10:45.21:45,0,535	0/1:19,0:17:46.71:47,0,1218	0/1:10,0:10:7.54:8,0,271	./.	0/1:29,0:27:87.14:87,0,788	./.	./.	0/1:21,0:20:0:0,0,0	./.	1/1:27,1:23:13.83:702,14,0	1/1:10,7:16:4.33:147,4,0	1/1:6,0:5:11.65:65,12,0
chr10	6694062	.	CTCA	C	330.14	PASS	AB=1.000;AC=17;AF=0.340;AN=50;BaseQRankSum=1.662;DP=191;FS=1.166;HRun=0;HaplotypeScore=47.1691;InbreedingCoeff=0.4888;MQ=58.24;MQ0=7;MQRankSum=-3.792;QD=5.90;ReadPosRankSum=1.293;VQSLOD=1.4241;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:39.93:0,40,678	0/0:3,0:3:5.99:0,6,100	0/0:20,0:4:6.87:0,7,49	0/0:21,0:13:16.82:0,17,190	0/0:3,0:3:3.01:0,3,51	0/0:6,0:6:6:0,6,76	0/0:8,0:8:17.88:0,18,213	1/1:8,0:8:15.34:109,15,0	0/0:3,0:2:0.89:0,1,2	0/0:6,0:6:11.22:0,11,109	0/0:6,0:6:8.94:0,9,113	1/1:1,4:5:6.02:89,6,0	0/1:4,0:4:18.16:28,0,18	1/1:2,0:2:1.56:9,2,0	0/0:6,0:6:12.48:0,12,153	0/0:5,0:5:11.81:0,12,126	0/1:5,0:5:3.60:4,0,60	./.	0/0:7,0:7:17.96:0,18,152	./.	0/0:12,0:11:9.13:0,9,126	0/1:7,0:7:8.18:8,0,98	./.	1/1:4,0:4:3.74:43,4,0	0/0:9,0:9:12.01:0,12,149	1/1:6,0:5:5.93:40,6,0	1/1:8,0:8:14.55:85,15,0	1/1:7,0:7:3.44:72,3,0
chr10	6695742	.	AGATGGCT	A	6695.75	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=13.981;DP=716;FS=2.551;HRun=0;HaplotypeScore=163.7820;InbreedingCoeff=0.9962;MQ=67.96;MQ0=0;MQRankSum=-14.446;QD=69.75;ReadPosRankSum=1.173;VQSLOD=5.1485;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:62,0:62:99:0,178,7119	0/0:16,0:16:48.16:0,48,1920	0/0:20,0:19:54.10:0,54,1882	0/0:20,0:20:60.10:0,60,2113	0/0:25,0:25:75.26:0,75,3143	0/0:21,0:21:60.17:0,60,2132	0/0:36,0:36:99:0,108,4195	0/0:37,0:37:99:0,111,4329	0/0:22,0:22:66.23:0,66,2583	0/0:26,0:26:78.26:0,78,2995	0/0:24,0:24:72.25:0,72,3017	1/1:0,21:21:51.18:1423,51,0	1/1:0,19:19:57.20:1587,57,0	1/1:0,17:17:39.13:1088,39,0	0/0:28,0:28:84.27:0,84,3220	0/0:34,0:34:99:0,102,4024	0/0:31,0:31:93.30:0,93,3632	0/0:10,0:10:30.10:0,30,1258	0/0:19,0:19:57.20:0,57,2235	0/0:21,0:21:63.17:0,63,2261	0/0:53,0:53:99:0,160,6470	0/0:30,0:30:87.28:0,87,3422	1/1:0,30:30:81.28:2184,81,0	1/1:0,9:9:15.05:413,15,0	0/0:19,0:19:57.18:0,57,2237	0/0:25,0:25:75.25:0,75,2859	0/0:25,0:25:75.24:0,75,3020	0/0:16,0:16:48.16:0,48,1922
chr10	6695897	.	C	CA	2146.97	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-9.899;DP=647;FS=2.756;HRun=9;HaplotypeScore=65.9066;InbreedingCoeff=0.9935;MQ=79.38;MQ0=0;MQRankSum=0.910;QD=23.86;ReadPosRankSum=-3.506;VQSLOD=3.1740;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:70.34:0,70,758	0/0:13,0:13:38.99:0,39,339	0/0:22,0:23:51.41:0,51,429	0/0:19,0:18:28.86:0,29,266	0/0:25,0:25:68.97:0,69,595	0/0:23,0:23:62.98:0,63,547	0/0:18,0:18:47.97:0,48,411	1/1:4,20:25:63.02:669,63,0	0/0:17,0:17:50.99:0,51,443	0/0:30,1:31:44.79:0,45,618	0/0:27,0:27:74.97:0,75,647	0/0:22,0:22:62.95:0,63,539	0/0:24,0:24:56.95:0,57,490	0/0:21,0:21:44.98:0,45,390	0/0:23,0:23:59.96:0,60,521	0/0:23,0:23:59.99:0,60,521	0/0:41,0:41:99:0,108,937	0/0:12,0:12:29.99:0,30,260	0/0:13,0:13:26.97:0,27,234	0/0:27,0:27:74.98:0,75,651	0/0:13,0:13:26.99:0,27,234	0/0:29,0:29:77.96:0,78,673	0/0:35,0:35:89.96:0,90,777	0/0:23,0:23:53.94:0,54,462	0/0:21,0:21:59.99:0,60,521	1/1:6,21:27:14.06:608,14,0	1/1:1,21:22:57.15:631,57,0	1/1:3,13:16:36.10:398,36,0
chr10	6696631	.	GAACAAA	G	622.74	PASS	AB=0.783;AC=11;AF=0.196;AN=56;BaseQRankSum=1.412;DP=472;FS=19.630;HRun=0;HaplotypeScore=98.3598;InbreedingCoeff=0.5408;MQ=76.07;MQ0=9;MQRankSum=-0.311;QD=5.71;ReadPosRankSum=3.456;VQSLOD=0.5455;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:47.44:0,47,649	0/0:4,0:4:9.01:0,9,189	0/0:39,0:11:13.40:0,13,108	0/0:38,0:18:18.16:0,18,241	0/0:19,0:18:42.04:0,42,776	0/0:19,0:19:51.95:0,52,1026	0/0:14,0:14:33.02:0,33,511	0/1:29,0:29:42.25:42,0,281	0/0:19,0:19:54.77:0,55,794	0/0:20,0:20:47.55:0,48,848	0/0:15,0:15:38.06:0,38,611	0/1:1,12:13:0.02:0,0,0	1/1:11,0:11:29.98:260,30,0	1/1:12,0:12:27.66:269,28,0	0/0:23,0:23:59.96:0,60,1025	0/0:12,0:12:33.03:0,33,502	0/0:22,0:22:59.86:0,60,1135	0/0:20,0:20:53.83:0,54,727	0/0:21,0:21:59.90:0,60,1066	0/0:13,0:13:33.01:0,33,518	0/0:14,0:14:39:0,39,499	0/0:10,0:10:30.02:0,30,484	0/1:1,9:10:1.17:15,0,1	1/1:9,0:9:9.47:78,9,0	0/0:15,0:15:35.98:0,36,568	0/1:11,0:13:49.19:49,0,214	0/1:12,0:12:67.44:67,0,90	0/0:6,0:6:15.40:0,15,115
chr10	6697041	.	AACACACAC	A	2417.30	PASS	AB=0.753;AC=41;AF=0.788;AN=52;BaseQRankSum=1.973;DP=567;FS=9.877;HRun=0;HaplotypeScore=150.7178;InbreedingCoeff=0.2149;MQ=65.13;MQ0=15;MQRankSum=-0.124;QD=5.43;ReadPosRankSum=1.477;VQSLOD=2.1129;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:12,0:20:0:0,0,0	1/1:5,0:7:3.01:56,3,0	./.	./.	0/0:17,0:20:0.47:0,0,1	1/1:14,2:17:11.93:218,12,0	1/1:23,4:26:3.01:74,3,0	0/0:21,0:20:0.89:0,1,2	1/1:15,4:19:12.04:279,12,0	1/1:16,0:22:6.02:112,6,0	1/1:19,0:19:3.01:56,3,0	1/1:13,0:16:11.72:122,12,0	0/0:18,0:16:6.02:0,6,150	0/1:17,3:25:71.64:233,0,72	1/1:17,0:26:26.97:432,27,0	1/1:15,2:17:3.01:74,3,0	1/1:11,2:16:7.88:116,8,0	1/1:12,0:14:6.02:112,6,0	1/1:18,2:20:5.86:148,6,0	1/1:7,3:10:3.01:74,3,0	1/1:36,0:40:2.75:53,3,0	1/1:17,3:20:2.97:20,3,0	0/0:7,0:10:3.01:0,3,35	1/1:23,1:31:0.85:2,1,0	1/1:22,0:22:3.01:74,3,0	1/1:18,0:22:8.24:119,8,0	1/1:20,0:22:6.02:112,6,0	0/1:6,0:8:21.61:50,0,22
chr10	6699650	.	TC	T	7647.53	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=1.436;DP=476;FS=12.176;HRun=8;HaplotypeScore=58.2933;InbreedingCoeff=0.9187;MQ=73.37;MQ0=1;MQRankSum=-0.606;QD=20.95;ReadPosRankSum=4.735;VQSLOD=4.2764;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,23:28:54.08:521,54,0	1/1:2,8:10:21.03:202,21,0	0/0:24,1:19:25.18:0,25,252	0/0:29,0:20:20.23:0,20,207	1/1:0,12:12:35.80:330,36,0	1/1:1,16:17:42.07:405,42,0	1/1:3,21:24:51.08:492,51,0	0/0:19,0:20:35.10:0,35,351	1/1:0,8:8:15.02:145,15,0	1/1:2,16:18:45.05:427,45,0	1/1:4,11:15:24.03:232,24,0	1/1:2,23:25:45.07:434,45,0	1/1:1,16:17:33.05:319,33,0	1/1:2,23:25:63.10:608,63,0	1/1:2,10:12:30.05:290,30,0	1/1:1,19:20:42.07:405,42,0	1/1:1,22:23:60.10:579,60,0	1/1:0,5:5:15.02:145,15,0	1/1:4,2:6:6.01:58,6,0	1/1:1,12:13:30.04:289,30,0	1/1:5,31:36:81.12:782,81,0	1/1:3,11:14:33.05:318,33,0	1/1:1,6:7:12.02:116,12,0	1/1:0,20:20:48.08:463,48,0	1/1:3,7:10:9.01:87,9,0	0/0:4,0:4:3.48:0,3,37	0/0:23,0:23:60.17:0,60,713	0/0:9,0:9:27.08:0,27,325
chr10	6700120	.	CTT	C	2191.21	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-4.873;DP=452;FS=3.784;HRun=5;HaplotypeScore=105.6878;InbreedingCoeff=0.9792;MQ=63.89;MQ0=10;MQRankSum=-4.349;QD=24.35;ReadPosRankSum=-1.671;VQSLOD=1.9193;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:75.20:0,75,1160	0/0:6,0:6:18.06:0,18,230	0/0:26,0:11:21.76:0,22,242	0/0:14,0:7:9.94:0,10,133	0/0:20,0:20:60.19:0,60,790	0/0:12,0:12:35.73:0,36,327	0/0:15,0:15:41.34:0,41,365	1/1:2,28:27:72.21:934,72,0	0/0:18,0:18:42.57:0,43,305	0/0:18,0:17:51.17:0,51,681	0/0:11,0:11:33.11:0,33,442	0/0:11,0:12:30.07:0,30,389	0/0:7,0:7:21.07:0,21,313	0/0:10,0:11:29.60:0,30,364	0/0:19,0:18:54.17:0,54,716	0/0:13,0:13:35.07:0,35,316	0/0:30,0:30:72.54:0,73,581	0/0:15,0:15:33.10:0,33,424	0/0:15,0:12:32.39:0,32,291	0/0:21,0:21:51.85:0,52,470	0/0:9,0:9:27.09:0,27,358	0/0:8,0:8:20.24:0,20,148	0/0:10,0:10:30.07:0,30,414	0/0:10,0:10:24.08:0,24,356	0/0:16,0:16:34.43:0,34,342	1/1:2,17:19:27.57:438,28,0	1/1:1,22:24:45.90:554,46,0	1/1:6,9:15:36.47:425,36,0
chr10	6700125	.	TAA	T	3720.65	PASS	AB=0.571;AC=33;AF=0.589;AN=56;BaseQRankSum=-0.097;DP=467;FS=5.244;HRun=13;HaplotypeScore=106.0211;InbreedingCoeff=0.9153;MQ=67.01;MQ0=6;MQRankSum=2.356;QD=14.15;ReadPosRankSum=3.147;VQSLOD=2.8450;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:28:56.01:0,56,683	1/1:0,0:6:14.04:50,14,0	0/0:26,0:13:11.08:0,11,172	0/0:15,0:10:20.24:0,20,233	1/1:7,0:22:39.94:180,40,0	1/1:3,8:12:26.89:240,27,0	1/1:1,12:14:36.02:338,36,0	0/0:33,0:30:36.32:0,36,255	1/1:3,12:16:35.87:325,36,0	1/1:3,0:17:33.61:145,34,0	1/1:3,0:11:19.81:73,20,0	0/0:3,0:12:26.46:0,26,159	0/0:2,0:7:15.44:0,15,63	0/0:2,0:10:21.75:0,22,76	1/1:7,0:19:13.88:115,14,0	1/1:2,11:14:29.61:272,30,0	1/1:3,25:29:69.02:657,69,0	1/1:2,1:16:21.86:97,22,0	1/1:6,10:14:29.76:254,30,0	1/1:3,18:22:48.13:427,48,0	1/1:2,0:9:15.24:52,15,0	1/1:1,7:9:18.32:152,18,0	0/1:3,1:12:6.30:6,0,77	0/0:3,0:10:12.48:0,12,43	1/1:0,15:16:35.94:336,36,0	0/0:18,1:19:17.73:0,18,156	0/0:28,0:27:22.28:0,22,216	0/0:15,0:15:26.72:0,27,185
chr10	6700138	.	AC	A	788.17	PASS	AB=0.982;AC=11;AF=0.196;AN=56;BaseQRankSum=2.334;DP=491;FS=4.594;HRun=2;HaplotypeScore=104.4333;InbreedingCoeff=0.6703;MQ=67.28;MQ0=5;MQRankSum=-3.158;QD=6.36;ReadPosRankSum=-1.244;VQSLOD=0.3247;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:71.52:0,72,745	0/1:7,0:7:5.75:6,0,26	0/0:31,0:17:45:0,45,338	0/1:17,0:13:6.42:6,0,107	0/0:23,0:23:25.54:0,26,198	0/0:12,0:12:32.03:0,32,205	0/0:17,0:17:46.15:0,46,296	1/1:26,2:27:52.39:309,52,0	0/0:16,0:16:41.57:0,42,221	0/0:21,0:21:35.06:0,35,221	0/1:11,0:11:3.29:3,0,55	0/0:14,0:14:25.84:0,26,164	0/0:9,0:9:15.27:0,15,88	0/0:11,0:11:8.46:0,8,63	0/0:17,0:15:24.27:0,24,104	0/0:15,0:15:32.80:0,33,199	0/0:32,0:32:86.84:0,87,535	0/0:16,0:16:17.49:0,17,75	0/0:20,0:19:52.04:0,52,346	0/0:23,0:23:57.88:0,58,334	0/0:12,0:12:10.19:0,10,127	0/0:10,0:10:27.83:0,28,159	0/0:12,0:12:8.87:0,9,105	0/0:7,0:7:5.36:0,5,14	0/0:19,0:19:42.16:0,42,244	1/1:20,1:21:30.38:250,30,0	1/1:25,2:26:52.02:315,52,0	1/1:12,0:12:18.32:62,18,0
chr10	6700511	.	AATGGG	A	4751.29	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=12.097;DP=622;FS=7.873;HRun=0;HaplotypeScore=117.1446;InbreedingCoeff=0.9926;MQ=65.04;MQ0=1;MQRankSum=-1.545;QD=55.25;ReadPosRankSum=4.266;VQSLOD=5.3852;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,102,3130	0/0:9,0:9:27.09:0,27,828	0/0:32,0:32:90.23:0,90,2756	0/0:25,0:24:69.01:0,69,1828	0/0:33,0:33:84.29:0,84,2672	0/0:20,0:20:60.21:0,60,1869	0/0:17,0:17:48.16:0,48,1551	0/0:35,0:35:99:0,105,3318	0/0:16,0:16:48.16:0,48,1499	0/0:31,0:31:93.32:0,93,2944	0/0:17,0:17:48.16:0,48,1530	1/1:1,21:22:54.19:1204,54,0	1/1:1,15:16:45.15:1003,45,0	1/1:1,13:14:36.12:803,36,0	0/0:24,0:24:72.25:0,72,2307	0/0:16,0:16:48.16:0,48,1488	0/0:18,0:18:51.17:0,51,1509	0/0:29,0:29:84.25:0,84,2522	0/0:18,0:18:54.15:0,54,1522	0/0:35,0:35:99:0,102,3259	0/0:20,0:19:57.20:0,57,1842	0/0:25,0:25:72.25:0,72,2282	1/1:0,16:16:42.14:936,42,0	1/1:3,15:18:36.59:804,37,0	0/0:25,0:25:75.25:0,75,2266	0/0:29,0:29:87.30:0,87,2743	0/0:21,0:20:63.22:0,63,2012	0/0:5,0:5:12.04:0,12,387
chr10	6700587	.	ACCAAC	A	2731.97	PASS	AB=0.538;AC=7;AF=0.125;AN=56;BaseQRankSum=9.446;DP=599;FS=9.951;HRun=0;HaplotypeScore=118.5516;InbreedingCoeff=0.7727;MQ=63.22;MQ0=0;MQRankSum=-7.128;QD=44.06;ReadPosRankSum=0.055;VQSLOD=3.4589;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,108,3225	0/0:11,0:11:33.11:0,33,1013	0/0:14,0:14:39.11:0,39,958	0/0:19,0:18:54.14:0,54,1403	0/0:31,0:31:75.26:0,75,2276	0/0:25,0:25:72.25:0,72,2193	0/0:17,0:17:33.11:0,33,1015	1/1:7,19:26:57.18:1112,57,0	0/0:17,0:17:48.15:0,48,1408	0/0:29,0:29:84.29:0,84,2545	0/0:28,0:28:84.29:0,84,2471	0/0:17,0:17:45.15:0,45,1355	0/0:15,0:15:39.13:0,39,1175	0/0:14,0:14:42.10:0,42,1214	0/0:20,0:20:54.19:0,54,1611	0/0:20,0:20:60.21:0,60,1842	0/0:25,0:25:66.23:0,66,2018	0/0:26,0:26:78.27:0,78,2390	0/0:17,0:17:45.15:0,45,1333	0/0:42,0:42:99:0,114,3422	0/0:12,0:12:36.12:0,36,1029	0/0:33,0:33:93.32:0,93,2850	0/0:16,0:16:45.15:0,45,1381	0/0:24,0:24:63.22:0,63,1936	0/0:26,0:26:72.25:0,72,2142	0/1:2,12:14:53.15:644,0,53	1/1:5,16:21:51.18:1054,51,0	1/1:0,1:1:3.01:62,3,0
chr10	6700758	.	A	AATACCCTTGGG	12164.05	PASS	AC=14;AF=0.259;AN=54;BaseQRankSum=-2.632;DP=617;FS=22.988;HRun=0;HaplotypeScore=184.5814;InbreedingCoeff=0.9833;MQ=53.34;MQ0=12;MQRankSum=-12.417;QD=107.65;ReadPosRankSum=1.462;VQSLOD=3.4495;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,4:10:18.06:898,18,0	1/1:3,4:6:15.05:773,15,0	0/0:35,0:18:48.13:0,48,1425	0/0:38,0:25:66.22:0,66,2206	1/1:17,13:27:54.19:2567,54,0	0/0:23,0:23:63.22:0,63,2220	0/0:16,0:16:48.13:0,48,1603	0/0:32,0:30:84.25:0,84,2830	0/0:27,0:27:72.25:0,72,2578	1/1:7,11:18:45.15:2454,45,0	1/1:10,12:22:57.20:2611,57,0	0/0:29,0:29:66.23:0,66,2213	0/0:18,0:18:45.15:0,45,1550	0/0:23,0:23:60.16:0,60,1970	1/1:7,9:16:45.15:2337,45,0	0/0:37,0:36:99:0,108,3454	0/0:27,0:26:75.26:0,75,2605	1/1:4,2:5:9.03:524,9,0	0/0:28,0:25:69.24:0,69,2305	0/0:32,0:30:87.30:0,87,2961	./.	0/0:23,0:23:66.23:0,66,2361	0/0:22,0:21:63.22:0,63,2219	0/0:17,0:17:48.16:0,48,1710	0/0:15,0:15:42.13:0,42,1421	0/0:25,0:23:69.21:0,69,2318	0/0:29,0:29:72.25:0,72,2568	0/0:6,0:6:18.06:0,18,545
chr10	6701099	.	CA	C	1285.27	PASS	AB=0.739;AC=18;AF=0.333;AN=54;BaseQRankSum=6.186;DP=417;FS=8.023;HRun=1;HaplotypeScore=37.4837;InbreedingCoeff=0.6574;MQ=54.12;MQ0=15;MQRankSum=-8.173;QD=15.67;ReadPosRankSum=-1.926;VQSLOD=2.1768;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,9:5:6.02:84,6,0	0/0:0,1:1:0:0,0,0	0/0:58,0:9:5.47:0,5,251	0/0:52,0:9:10.65:0,11,335	1/1:2,1:2:3.01:42,3,0	0/0:19,0:19:51.16:0,51,778	0/0:24,0:23:63.21:0,63,981	0/1:24,2:13:35.90:36,0,39	0/0:10,0:10:27.09:0,27,424	1/1:0,4:3:9.02:112,9,0	./.	0/0:16,0:16:39.13:0,39,623	0/0:8,0:8:21.07:0,21,333	0/0:12,1:12:30.06:0,30,453	1/1:0,9:8:21.07:293,21,0	0/0:18,0:18:51.17:0,51,815	0/0:34,0:34:99:0,99,1560	0/1:2,9:10:65.65:227,0,66	0/0:12,0:9:24.06:0,24,352	0/0:10,0:10:24.07:0,24,361	1/1:0,2:2:6.02:84,6,0	0/0:16,0:16:45.15:0,45,719	0/0:18,0:18:54.18:0,54,863	0/0:19,0:19:54.18:0,54,856	0/0:4,0:4:12.04:0,12,192	1/1:0,11:11:33.11:461,33,0	1/1:0,3:1:3.01:42,3,0	1/1:0,2:2:6.02:84,6,0
chr10	6702448	.	TG	T	2465.05	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=9.321;DP=674;FS=2.914;HRun=1;HaplotypeScore=65.5772;InbreedingCoeff=0.9974;MQ=84.97;MQ0=0;MQRankSum=-2.129;QD=36.79;ReadPosRankSum=-1.703;VQSLOD=3.3025;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,144,2278	0/0:6,0:6:18.06:0,18,282	0/0:19,0:19:54.17:0,54,839	0/0:25,0:24:55.28:0,55,847	0/0:15,0:15:42.14:0,42,671	0/0:19,0:19:57.18:0,57,887	0/0:36,0:36:99:0,108,1716	1/1:0,20:20:60.19:822,60,0	0/0:33,0:33:99:0,99,1535	0/0:22,0:22:66.21:0,66,1005	0/0:9,0:9:27.06:0,27,384	0/0:37,0:37:99:0,111,1746	0/0:32,0:32:96.28:0,96,1480	0/0:27,0:27:81.28:0,81,1287	0/0:16,0:16:48.16:0,48,767	0/0:18,0:18:54.18:0,54,861	0/0:24,0:24:72.25:0,72,1151	0/0:22,0:22:66.23:0,66,1055	0/0:30,0:30:90.30:0,90,1408	0/0:12,0:12:36.12:0,36,568	0/0:65,0:65:99:0,190,2994	0/0:14,0:14:39.13:0,39,617	0/0:21,0:21:63.21:0,63,1007	0/0:40,0:40:99:0,120,1895	0/0:14,0:14:42.14:0,42,672	1/1:0,17:17:51.17:713,51,0	1/1:0,16:16:36.12:502,36,0	1/1:0,14:14:42.14:587,42,0
chr10	6703414	.	T	TACAC	3079.23	PASS	AB=0.938;AC=33;AF=0.589;AN=56;BaseQRankSum=5.967;DP=661;FS=4.011;HRun=0;HaplotypeScore=170.4697;InbreedingCoeff=0.0674;MQ=65.14;MQ0=11;MQRankSum=1.135;QD=6.48;ReadPosRankSum=-4.559;VQSLOD=1.5357;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:36,0:36:19.22:232,19,0	1/1:2,0:8:5.99:48,6,0	0/0:49,0:23:27.05:0,27,597	0/0:55,0:30:33.29:0,33,583	1/1:3,0:9:2.99:24,3,0	0/0:30,0:30:13.32:0,13,213	0/1:26,0:26:57.96:58,0,454	0/0:19,0:20:0.76:0,1,3	0/1:20,0:19:97.20:97,0,314	0/1:14,10:27:32.22:294,0,32	1/1:4,0:4:4.78:77,5,0	1/1:16,2:23:6.49:90,6,0	1/1:21,0:21:26.48:347,26,0	1/1:27,0:28:33:393,33,0	0/1:11,8:21:15.55:86,0,16	0/1:15,0:14:4.95:5,0,145	0/1:16,0:16:25.35:25,0,389	1/1:8,9:22:7.43:144,7,0	0/1:9,0:9:19.64:20,0,224	0/1:13,0:12:81.18:108,0,81	0/1:78,1:80:37.95:461,0,38	0/1:17,0:15:99:133,0,146	1/1:11,0:11:20.53:272,21,0	1/1:38,0:38:19.99:283,20,0	0/1:25,0:22:16.42:16,0,213	0/0:16,0:15:8.76:0,9,78	0/0:16,0:16:12.92:0,13,101	1/1:4,0:4:2.96:41,3,0
chr10	6703417	.	ACACACT	A	2227.97	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=-6.597;DP=675;FS=18.627;HRun=0;HaplotypeScore=165.9032;InbreedingCoeff=-0.0094;MQ=61.45;MQ0=15;MQRankSum=2.648;QD=4.69;ReadPosRankSum=1.626;VQSLOD=1.7695;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:37,0:37:99:129,0,228	0/0:9,0:9:9.03:0,9,145	0/1:51,0:22:1.77:2,0,426	0/1:53,0:27:24.97:25,0,347	0/0:13,0:12:14.96:0,15,195	0/1:29,0:29:2.21:2,0,186	0/0:28,0:28:48.62:0,49,588	1/1:3,15:18:47.90:418,48,0	0/0:21,0:20:35.88:0,36,405	0/1:27,0:27:79.23:79,0,672	0/0:6,0:6:15:0,15,175	0/1:24,0:23:28.36:28,0,157	0/1:20,0:20:98.71:99,0,271	0/1:29,0:29:81.82:82,0,335	0/0:23,0:22:21.54:0,22,376	0/0:17,0:16:18.43:0,18,170	0/0:17,0:17:35.46:0,35,354	0/1:22,0:22:52.61:53,0,128	0/0:10,0:10:24.01:0,24,271	0/0:14,0:13:11.79:0,12,135	0/1:78,0:78:99:365,0,985	0/0:17,0:15:24.02:0,24,324	0/1:11,0:11:27.85:28,0,238	0/1:39,0:39:99:211,0,218	0/0:25,0:22:21.42:0,21,240	1/1:3,14:16:32.78:447,33,0	1/1:2,14:16:20.96:374,21,0	0/1:4,0:4:36.61:61,0,37
chr10	6703763	.	T	TG	4582.80	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-8.870;DP=600;FS=1.208;HRun=7;HaplotypeScore=103.2502;InbreedingCoeff=0.9854;MQ=87.67;MQ0=0;MQRankSum=-2.252;QD=29.38;ReadPosRankSum=1.024;VQSLOD=4.3854;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,31:32:87.27:1051,87,0	1/1:2,6:8:9.03:109,9,0	0/0:21,0:21:50.77:0,51,472	0/0:22,0:22:51.07:0,51,490	1/1:2,8:10:24.03:273,24,0	0/0:11,0:11:24.03:0,24,232	0/0:25,0:25:60.09:0,60,579	0/0:35,0:35:93.04:0,93,875	0/0:19,0:19:48.54:0,49,464	1/1:3,17:20:51.16:616,51,0	1/1:2,5:7:15.05:179,15,0	0/0:30,0:30:75.09:0,75,718	0/0:20,0:20:57.09:0,57,550	0/0:33,0:33:87.12:0,87,833	1/1:1,13:14:36.11:435,36,0	0/0:18,0:18:51.07:0,51,488	0/0:26,0:26:60.06:0,60,572	1/1:2,21:23:63.19:760,63,0	0/0:23,0:23:54.06:0,54,514	0/0:23,0:23:51.07:0,51,492	1/1:3,39:42:96.29:1159,96,0	0/0:15,0:14:36.06:0,36,348	0/0:19,0:19:51.08:0,51,492	0/0:12,0:12:30.05:0,30,290	0/0:21,0:21:57.09:0,57,550	0/0:27,0:27:69.11:0,69,666	0/0:38,0:38:99:0,108,1043	0/0:6,0:6:18.03:0,18,174
chr10	6703907	.	CA	C	2150.80	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=10.659;DP=611;FS=0.000;HRun=1;HaplotypeScore=85.5544;InbreedingCoeff=0.9951;MQ=82.69;MQ0=0;MQRankSum=-0.246;QD=34.14;ReadPosRankSum=-2.285;VQSLOD=2.8181;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,111,1713	0/0:12,0:12:36.12:0,36,575	0/0:15,0:15:42.14:0,42,644	0/0:18,0:18:34.99:0,35,664	0/0:16,0:16:45.14:0,45,695	0/0:14,0:14:42.13:0,42,636	0/0:22,0:22:66.20:0,66,1009	1/1:0,25:25:69.18:897,69,0	0/0:20,0:20:60.20:0,60,959	0/0:17,0:17:45.15:0,45,718	0/0:18,0:18:48.16:0,48,755	0/0:40,0:40:99:0,117,1819	0/0:20,0:20:60.20:0,60,959	0/0:25,0:25:75.22:0,75,1144	0/0:9,0:9:27.09:0,27,428	0/0:20,0:20:60.20:0,60,957	0/0:35,0:35:99:0,105,1577	0/0:34,0:34:99:0,99,1576	0/0:22,0:22:66.15:0,66,981	0/0:16,0:16:45.15:0,45,719	0/0:62,0:62:99:0,187,2941	0/0:21,0:21:63.21:0,63,1006	0/0:16,0:16:45.15:0,45,719	0/0:23,0:23:69.20:0,69,1053	0/0:14,0:14:39.11:0,39,595	1/1:0,17:17:51.12:659,51,0	1/1:0,14:14:39.13:545,39,0	1/1:0,7:7:15.05:210,15,0
chr10	6710894	.	G	GT	7482.24	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-13.024;DP=620;FS=11.222;HRun=9;HaplotypeScore=60.6347;InbreedingCoeff=0.9838;MQ=67.43;MQ0=2;MQRankSum=-0.867;QD=25.98;ReadPosRankSum=1.050;VQSLOD=4.8471;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,34:36:71.99:961,72,0	1/1:0,14:14:36.10:398,36,0	0/0:20,0:16:38.72:0,39,320	0/0:17,0:17:37.64:0,38,282	1/1:2,31:33:93.06:973,93,0	0/0:23,0:23:59.98:0,60,521	0/0:19,0:20:50:0,50,422	1/1:6,24:30:69.17:753,69,0	0/0:25,0:25:71.98:0,72,625	1/1:9,16:24:45.10:488,45,0	1/1:1,24:25:66.14:717,66,0	0/0:29,0:29:77.94:0,78,671	0/0:16,0:16:44.99:0,45,391	0/0:12,0:12:32.99:0,33,286	1/1:2,16:18:42.07:451,42,0	0/0:21,0:21:50.98:0,51,443	0/0:26,0:26:62.92:0,63,536	1/1:4,14:18:19.15:437,19,0	0/0:23,0:23:47.97:0,48,414	0/0:14,1:15:5.78:0,6,279	1/1:5,25:29:67.42:731,67,0	0/0:24,0:24:59.94:0,60,516	0/0:21,0:21:53.98:0,54,469	0/0:17,0:17:47.99:0,48,417	0/0:22,0:22:59.98:0,60,521	1/1:3,15:18:45.12:498,45,0	1/1:5,25:31:69.02:744,69,0	1/1:0,10:10:30.08:332,30,0
chr10	6711135	.	TG	T	9775.72	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=13.694;DP=614;FS=0.621;HRun=1;HaplotypeScore=65.7217;InbreedingCoeff=0.9995;MQ=97.32;MQ0=0;MQRankSum=-3.734;QD=40.06;ReadPosRankSum=1.982;VQSLOD=5.4996;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,20:20:60.20:839,60,0	1/1:1,11:12:33.08:441,33,0	0/0:36,0:36:99:0,108,1663	0/0:25,0:25:75.24:0,75,1133	1/1:0,23:23:63.17:859,63,0	0/0:26,0:26:75.24:0,75,1173	0/0:22,0:22:66.16:0,66,980	1/1:0,34:34:99:1427,102,0	0/0:30,0:30:90.27:0,90,1388	1/1:0,28:28:84.28:1175,84,0	1/1:0,12:12:36.12:503,36,0	0/0:19,0:19:57.19:0,57,909	0/0:35,0:35:99:0,105,1625	0/0:13,0:13:39.13:0,39,623	1/1:0,21:21:60.20:839,60,0	0/0:22,0:22:66.21:0,66,1031	0/0:15,0:15:45.15:0,45,719	1/1:0,9:9:27.09:377,27,0	0/0:15,0:15:45.15:0,45,718	0/0:26,0:26:78.25:0,78,1207	1/1:0,26:26:72.24:1007,72,0	0/0:21,0:21:60.18:0,60,934	0/0:20,0:20:57.19:0,57,911	0/0:22,0:22:66.23:0,66,1055	0/0:23,0:23:69.24:0,69,1100	1/1:0,19:19:57.19:797,57,0	1/1:0,32:32:84.28:1175,84,0	1/1:0,8:8:24.08:336,24,0
chr10	6712052	.	CA	C	10654.65	PASS	AB=1.000;AC=50;AF=0.893;AN=56;BaseQRankSum=4.353;DP=747;FS=0.000;HRun=6;HaplotypeScore=140.4809;InbreedingCoeff=0.6644;MQ=72.65;MQ0=5;MQRankSum=-4.246;QD=15.20;ReadPosRankSum=6.920;VQSLOD=3.0346;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:34,0:34:50.51:368,51,0	1/1:12,0:12:31.32:159,31,0	0/0:24,0:22:27.25:0,27,557	0/0:22,0:20:51.11:0,51,633	1/1:37,0:37:32.49:417,32,0	1/1:2,22:24:63.16:677,63,0	1/1:2,26:28:72.18:774,72,0	0/1:42,0:38:17.93:29,0,18	1/1:0,29:29:75.19:806,75,0	1/1:23,0:23:60.85:314,61,0	1/1:25,0:25:65.69:334,66,0	1/1:21,0:21:48.59:248,49,0	1/1:33,0:33:39.37:363,39,0	1/1:24,0:24:62.70:312,63,0	1/1:35,0:35:32.05:361,32,0	1/1:0,31:31:81.20:871,81,0	1/1:2,30:32:79.72:868,80,0	1/1:21,0:21:57.86:319,58,0	1/1:3,21:24:63.16:677,63,0	1/1:0,25:25:72.18:772,72,0	0/1:30,0:30:3.18:280,0,3	1/1:3,16:19:48.12:516,48,0	1/1:25,0:25:60.21:334,60,0	1/1:25,0:25:66.12:342,66,0	1/1:2,13:15:30.08:322,30,0	1/1:40,1:39:15.56:88,16,0	1/1:32,0:30:29.82:72,30,0	1/1:13,0:13:14.59:34,15,0
chr10	6712057	.	AAC	A	6580.23	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=1.069;DP=734;FS=7.824;HRun=0;HaplotypeScore=170.5741;InbreedingCoeff=0.9994;MQ=70.86;MQ0=5;MQRankSum=-1.917;QD=14.03;ReadPosRankSum=1.302;VQSLOD=4.3683;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:32,0:32:55.66:181,56,0	1/1:12,0:12:24.89:81,25,0	0/0:22,0:19:44.26:0,44,659	0/0:21,0:19:49.39:0,49,678	1/1:39,1:40:70.07:382,70,0	0/0:23,0:23:60.38:0,60,265	0/0:27,0:27:68.30:0,68,298	1/1:2,34:32:78.22:1098,78,0	0/0:29,0:29:67.10:0,67,273	1/1:23,0:23:51.38:189,51,0	1/1:25,0:25:54.18:188,54,0	1/1:23,0:23:37.89:124,38,0	1/1:31,0:31:62.09:204,62,0	1/1:23,0:23:48.84:161,49,0	1/1:35,0:35:62.17:203,62,0	0/0:33,0:33:79.61:0,80,376	0/0:32,0:32:75.26:0,75,311	1/1:22,0:22:45.32:160,45,0	0/0:23,0:23:60.82:0,61,259	0/0:25,0:25:63.20:0,63,251	1/1:30,0:30:27.17:188,27,0	0/0:17,0:17:45.70:0,46,199	1/1:26,0:26:46.43:151,46,0	1/1:29,0:29:51.06:168,51,0	0/0:13,0:13:26.45:0,26,104	1/1:3,33:34:98.51:1390,99,0	1/1:1,32:32:81.25:1177,81,0	1/1:0,13:13:36.12:536,36,0
chr10	6712058	.	AC	A	15698.64	PASS	AB=1.000;AC=50;AF=0.893;AN=56;BaseQRankSum=1.345;DP=726;FS=5.420;HRun=1;HaplotypeScore=122.7002;InbreedingCoeff=0.6432;MQ=69.20;MQ0=5;MQRankSum=-3.798;QD=22.88;ReadPosRankSum=7.287;VQSLOD=4.7122;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,31:31:75.25:1045,75,0	1/1:1,11:12:36.11:488,36,0	0/0:20,0:17:37.55:0,38,589	0/0:20,0:18:28.71:0,29,567	1/1:9,31:40:99:1491,113,0	1/1:23,0:23:28.47:148,28,0	1/1:27,0:27:32.38:160,32,0	1/1:34,1:31:76.20:473,76,0	1/1:30,0:30:37.53:184,38,0	1/1:0,23:23:69.15:914,69,0	1/1:0,25:25:72.20:982,72,0	1/1:0,23:23:51.17:712,51,0	1/1:1,28:29:87.28:1198,87,0	1/1:0,23:23:66.22:922,66,0	1/1:0,33:33:84.28:1172,84,0	1/1:33,0:33:16.02:146,16,0	1/1:32,0:32:41.82:208,42,0	1/1:0,22:22:60.20:836,60,0	0/1:24,0:24:17.99:87,0,18	1/1:25,0:25:55.27:190,55,0	1/1:6,24:30:75.97:1087,76,0	0/1:18,0:18:7.76:99,0,8	1/1:0,25:25:64.10:878,64,0	1/1:0,29:29:69.23:963,69,0	1/1:13,0:13:21.99:72,22,0	1/1:34,1:33:96.54:601,97,0	1/1:33,0:30:72.85:436,73,0	1/1:13,0:13:35.07:207,35,0
chr10	6712264	.	CA	C	5436.17	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=11.443;DP=599;FS=14.642;HRun=5;HaplotypeScore=72.0882;InbreedingCoeff=0.9969;MQ=75.56;MQ0=0;MQRankSum=0.898;QD=31.42;ReadPosRankSum=3.470;VQSLOD=4.1553;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,41:42:99:1329,108,0	1/1:0,20:20:51.16:628,51,0	0/0:11,0:11:30.09:0,30,402	0/0:13,0:13:31.51:0,32,463	1/1:3,26:29:69.21:845,69,0	0/0:20,0:20:57.19:0,57,821	0/0:20,0:20:54.16:0,54,739	0/0:36,0:36:99:0,102,1448	0/0:22,0:22:63.21:0,63,896	1/1:0,16:16:48.15:595,48,0	1/1:1,20:21:60.19:737,60,0	0/0:21,0:21:63.21:0,63,906	0/0:20,0:20:60.17:0,60,811	0/0:13,0:13:36.12:0,36,510	1/1:0,21:21:57.18:707,57,0	0/0:16,0:16:42.14:0,42,605	0/0:28,0:28:84.25:0,84,1181	1/1:0,15:15:33.10:409,33,0	0/0:37,0:37:99:0,105,1492	0/0:31,0:31:93.29:0,93,1298	1/1:2,7:9:15.05:186,15,0	0/0:16,0:16:48.16:0,48,683	0/0:22,0:22:60.20:0,60,861	0/0:16,0:16:42.14:0,42,603	0/0:19,0:19:57.19:0,57,820	0/0:21,0:21:26.07:0,26,826	0/0:22,0:22:66.22:0,66,943	0/0:22,0:21:66.22:0,66,946
chr10	6712994	.	T	TAA	9986.87	PASS	AB=0.548;AC=43;AF=0.768;AN=56;BaseQRankSum=-8.205;DP=591;FS=1.334;HRun=9;HaplotypeScore=95.3043;InbreedingCoeff=0.8426;MQ=80.85;MQ0=1;MQRankSum=-2.333;QD=21.39;ReadPosRankSum=1.143;VQSLOD=4.1359;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:38:38.45:199,38,0	1/1:4,8:13:23.57:332,24,0	0/0:17,0:17:0.57:0,1,285	0/0:16,0:16:33.05:0,33,348	1/1:1,24:26:71.60:984,72,0	1/1:4,2:34:84.15:846,84,0	1/1:3,0:8:15.03:154,15,0	0/0:25,0:25:63.13:0,63,662	1/1:4,1:19:36.06:357,36,0	1/1:1,19:22:59.68:862,60,0	1/1:5,21:27:65.62:924,66,0	1/1:1,0:15:29.94:103,30,0	1/1:0,0:15:29.82:103,30,0	1/1:2,0:21:42.67:149,43,0	1/1:3,23:27:60.20:906,60,0	1/1:4,0:23:48.08:460,48,0	1/1:4,1:20:39.54:381,40,0	1/1:0,14:14:42.14:647,42,0	1/1:10,2:21:36.08:423,36,0	1/1:8,4:28:63.14:694,63,0	1/1:4,7:12:21.07:306,21,0	1/1:6,2:23:57.01:585,57,0	1/1:3,0:24:47.51:165,48,0	0/1:3,0:17:33.06:52,0,33	1/1:4,3:18:33.07:355,33,0	0/0:23,1:24:16.94:0,17,581	0/0:27,0:26:69.15:0,69,731	0/0:15,0:15:42.07:0,42,436
chr10	6714020	.	C	CAA	13388.03	PASS	AB=0.632;AC=51;AF=0.911;AN=56;BaseQRankSum=-1.457;DP=522;FS=8.403;HRun=8;HaplotypeScore=104.0058;InbreedingCoeff=0.7311;MQ=64.08;MQ0=6;MQRankSum=-2.927;QD=26.67;ReadPosRankSum=2.966;VQSLOD=4.0391;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,28:37:69.22:1057,69,0	1/1:0,10:11:26.37:386,26,0	0/0:9,0:5:14.97:0,15,148	0/0:11,0:10:12.79:0,13,145	1/1:9,22:33:63.17:941,63,0	1/1:2,11:13:33.11:524,33,0	1/1:2,17:18:42.14:667,42,0	1/1:12,0:34:81.10:767,81,0	1/1:3,16:20:45.15:707,45,0	1/1:6,17:22:46.95:672,47,0	1/1:5,13:19:38.62:571,39,0	1/1:2,0:18:34.48:118,34,0	1/1:3,0:13:7.89:64,8,0	1/1:3,0:13:26.72:90,27,0	1/1:3,17:21:51.17:810,51,0	1/1:2,9:11:24.08:381,24,0	1/1:3,22:26:60.20:933,60,0	1/1:7,16:24:51.16:786,51,0	1/1:5,18:21:48.16:757,48,0	1/1:6,11:17:33.11:524,33,0	1/1:2,9:11:21.07:333,21,0	1/1:2,11:13:36.12:571,36,0	0/1:5,0:12:12.21:37,0,12	1/1:0,1:20:48.33:209,48,0	1/1:3,11:14:27.09:428,27,0	1/1:7,0:21:45.07:455,45,0	1/1:6,0:26:51.08:485,51,0	1/1:0,0:5:12.02:114,12,0
chr10	6714258	.	AGACGGT	A	4267	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-6.594;DP=628;FS=9.929;HRun=0;HaplotypeScore=204.3183;InbreedingCoeff=0.9897;MQ=88.54;MQ0=0;MQRankSum=-12.259;QD=44.45;ReadPosRankSum=4.725;VQSLOD=3.7304;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,147,4785	0/0:9,0:9:27.09:0,27,909	0/0:19,0:19:54.19:0,54,1836	0/0:32,0:32:90.27:0,90,2718	0/0:18,0:18:45.15:0,45,1465	0/0:22,0:22:66.23:0,66,2271	0/0:22,0:22:60.18:0,60,1941	0/0:19,0:19:57.19:0,57,1821	0/0:18,0:18:48.16:0,48,1692	0/0:30,0:30:87.28:0,87,2742	0/0:8,0:8:24.08:0,24,798	1/1:1,24:25:51.18:1204,51,0	1/1:0,17:18:48.16:1131,48,0	1/1:2,19:21:45.11:1011,45,0	0/0:19,0:19:48.16:0,48,1697	0/0:18,0:18:48.16:0,48,1659	0/0:45,0:45:99:0,132,4492	0/0:35,0:35:96.33:0,96,3300	0/0:24,0:24:57.20:0,57,1948	0/0:14,0:14:33.07:0,33,941	0/0:56,0:55:99:0,147,4874	0/0:12,0:12:30.10:0,30,953	1/1:0,15:14:27.09:637,27,0	1/1:3,14:17:12.04:284,12,0	0/0:16,0:16:45.09:0,45,1424	0/0:14,0:14:33.11:0,33,1126	0/0:24,0:24:69.24:0,69,2356	0/0:7,0:7:18.06:0,18,614
chr10	6714565	.	C	CT	8713.85	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=15.854;DP=711;FS=5.126;HRun=2;HaplotypeScore=119.9343;InbreedingCoeff=0.9992;MQ=63.67;MQ0=2;MQRankSum=4.884;QD=39.08;ReadPosRankSum=3.071;VQSLOD=4.1847;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,32:33:93.31:1338,93,0	1/1:1,11:13:36.12:516,36,0	0/0:27,0:18:48.11:0,48,567	0/0:21,0:16:48.09:0,48,537	1/1:3,19:22:54.18:778,54,0	0/0:17,0:17:45.13:0,45,545	0/0:33,0:33:84.22:0,84,998	0/0:29,0:29:87.26:0,87,1067	0/0:22,0:22:66.21:0,66,818	1/1:1,30:30:84.28:1209,84,0	1/1:0,19:19:51.17:735,51,0	0/0:40,0:40:99:0,117,1450	0/0:30,0:30:90.28:0,90,1112	0/0:32,0:32:93.27:0,93,1128	1/1:0,29:29:84.28:1210,84,0	0/0:24,0:24:72.23:0,72,892	0/0:19,0:19:54.14:0,54,654	1/1:3,21:24:63.21:905,63,0	0/0:26,0:24:69.21:0,69,855	0/0:12,0:12:33.10:0,33,409	1/1:1,51:52:99:2024,141,0	0/0:14,0:14:39.12:0,39,483	0/0:21,0:21:54.14:0,54,640	0/0:29,0:29:87.27:0,87,1078	0/0:19,0:19:57.18:0,57,702	0/0:34,1:35:56.15:0,56,1136	0/0:31,0:31:93.28:0,93,1139	0/0:7,0:7:21.07:0,21,260
chr10	6714771	.	C	CTTAA	27046.99	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=5.699;DP=581;FS=5.076;HRun=0;HaplotypeScore=112.3809;InbreedingCoeff=0.9785;MQ=71.49;MQ0=5;MQRankSum=-10.376;QD=63.19;ReadPosRankSum=3.454;VQSLOD=7.2143;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,21:22:60.21:1626,60,0	1/1:1,8:9:24.08:614,24,0	0/0:34,0:34:67.41:0,67,1372	0/0:26,0:26:22.22:0,22,1095	1/1:4,21:25:57.19:1413,57,0	1/1:3,24:28:75.26:1997,75,0	1/1:3,15:15:33.11:901,33,0	1/1:7,6:11:27.04:579,27,0	1/1:3,17:22:51.18:1391,51,0	1/1:4,19:25:66.21:1641,66,0	1/1:2,9:11:27.09:710,27,0	0/0:29,0:29:81.28:0,81,1570	0/0:11,0:11:30.10:0,30,580	0/0:27,0:27:78.25:0,78,1472	1/1:3,22:27:72.25:1887,72,0	1/1:4,14:20:53.82:1465,54,0	1/1:4,24:31:69.24:1875,69,0	1/1:2,7:8:21.07:515,21,0	1/1:7,11:11:26.50:635,27,0	1/1:3,24:26:66.23:1716,66,0	1/1:1,12:13:27.09:693,27,0	1/1:0,20:21:51.18:1396,51,0	0/0:15,0:15:45.15:0,45,872	0/0:10,0:10:30.10:0,30,581	1/1:5,13:19:48.16:1308,48,0	1/1:2,25:28:81.26:2149,81,0	1/1:2,31:33:87.30:2372,87,0	1/1:3,0:3:6.02:163,6,0
chr10	6715079	.	TTCCC	T	2287.54	PASS	AC=8;AF=0.148;AN=54;BaseQRankSum=3.537;DP=253;FS=23.856;HRun=0;HaplotypeScore=72.4273;InbreedingCoeff=0.6791;MQ=95.81;MQ0=0;MQRankSum=-7.988;QD=41.59;ReadPosRankSum=0.864;VQSLOD=1.4206;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:54.15:0,54,1144	0/0:6,0:6:18.02:0,18,323	0/0:13,0:13:35.54:0,36,436	0/0:20,0:17:38.75:0,39,565	0/0:12,0:12:30.07:0,30,560	0/0:5,0:5:6.02:0,6,118	0/0:5,0:5:6.02:0,6,151	1/1:0,22:22:66:983,66,0	0/0:3,0:3:3:0,3,25	0/0:15,0:15:45.14:0,45,991	0/0:8,0:8:15.04:0,15,292	0/0:9,0:9:17.96:0,18,243	0/0:5,0:5:8.04:0,8,81	0/0:5,0:5:4.26:0,4,67	0/0:15,0:15:24.08:0,24,554	0/0:3,0:3:9.01:0,9,102	./.	0/0:16,0:16:45.10:0,45,936	0/0:2,0:2:5.94:0,6,42	0/0:6,0:6:11.98:0,12,161	0/0:16,0:16:33.06:0,33,634	0/0:4,0:4:5.99:0,6,49	0/0:2,0:2:5.03:0,5,31	0/0:3,0:3:8.94:0,9,79	0/0:1,0:1:3:0,3,26	1/1:0,15:15:36.04:599,36,0	1/1:0,15:15:36.12:730,36,0	1/1:0,3:3:6.02:123,6,0
chr10	6715080	.	T	TC	1466.55	PASS	AB=0.875;AC=31;AF=0.674;AN=46;BaseQRankSum=-7.824;DP=249;FS=12.074;HRun=10;HaplotypeScore=63.0356;InbreedingCoeff=0.5221;MQ=94.73;MQ0=0;MQRankSum=3.817;QD=8.89;ReadPosRankSum=1.407;VQSLOD=0.9004;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:20:47.18:315,47,0	1/1:5,0:5:14.87:105,15,0	0/0:14,0:13:12.60:0,13,64	0/0:19,0:16:11.47:0,11,93	1/1:12,0:12:23.54:156,24,0	1/1:2,3:5:3.01:32,3,0	0/1:2,3:5:18.56:26,0,19	0/1:22,0:22:19.10:19,0,21	./.	1/1:15,0:15:39.94:224,40,0	1/1:7,0:7:11.77:72,12,0	1/1:6,3:9:3:32,3,0	1/1:5,1:6:0.47:1,0,0	1/1:2,3:5:3.48:33,3,0	1/1:15,0:15:23.68:164,24,0	1/1:3,0:3:2.99:24,3,0	./.	1/1:15,0:15:38.23:239,38,0	0/1:3,0:3:0:0,0,0	0/0:6,0:6:2.99:0,3,25	1/1:16,0:16:26.29:154,26,0	./.	1/1:2,0:2:3:25,3,0	./.	./.	0/0:15,0:15:17.47:0,17,53	0/0:15,0:15:25.67:0,26,76	0/0:3,0:3:4.44:0,4,13
chr10	6715085	.	C	CT	3143.93	PASS	AB=1.000;AC=20;AF=0.385;AN=52;BaseQRankSum=-4.152;DP=252;FS=1.978;HRun=0;HaplotypeScore=60.6659;InbreedingCoeff=0.6178;MQ=88.00;MQ0=0;MQRankSum=2.525;QD=21.68;ReadPosRankSum=4.804;VQSLOD=4.9168;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,21:22:48.15:660,48,0	1/1:0,5:5:15.05:208,15,0	0/0:11,0:10:23.69:0,24,241	0/0:20,0:16:29.86:0,30,285	1/1:1,10:11:24.07:325,24,0	0/0:5,0:5:2.81:0,3,47	0/1:5,0:5:1.77:2,0,37	0/1:24,0:24:42.49:109,0,42	./.	1/1:3,17:20:45.11:612,45,0	1/1:0,7:7:12.04:164,12,0	0/0:7,0:7:5.04:0,5,74	0/0:5,0:5:5.88:0,6,42	1/1:5,0:5:2.51:7,3,0	1/1:1,14:16:24.07:323,24,0	0/0:3,0:3:5.43:0,5,51	0/0:4,0:4:2.94:0,3,18	1/1:1,14:15:39.12:541,39,0	0/0:2,0:2:5.99:0,6,49	0/0:4,0:4:6.01:0,6,68	1/1:0,15:15:27.09:373,27,0	0/0:4,0:4:5.99:0,6,49	0/0:1,0:1:0.47:0,0,1	0/0:2,0:2:5.96:0,6,45	./.	0/0:18,0:18:10.02:0,10,97	0/0:15,0:15:18.43:0,18,65	0/0:4,0:4:4.19:0,4,13
chr10	6716137	.	GGT	G	559.77	PASS	AB=1.000;AC=19;AF=0.365;AN=52;BaseQRankSum=1.322;DP=640;FS=8.962;HRun=0;HaplotypeScore=120.7731;InbreedingCoeff=0.5869;MQ=67.28;MQ0=14;MQRankSum=0.411;QD=2.54;ReadPosRankSum=0.106;VQSLOD=1.6283;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:18.02:0,18,232	0/0:7,0:10:2.97:0,3,42	./.	./.	0/1:10,0:16:1.02:1,0,2	0/1:17,0:18:21.92:22,0,53	0/0:28,0:36:18:0,18,189	1/1:19,0:19:2.92:17,3,0	0/0:12,0:16:12:0,12,114	0/0:15,1:21:14.89:0,15,126	0/0:9,0:9:12:0,12,113	1/1:14,3:16:5.95:50,6,0	1/1:11,1:14:10.91:67,11,0	1/1:18,5:22:11.95:114,12,0	0/0:18,0:21:12.16:0,12,107	0/1:13,0:19:22.30:22,0,41	0/0:37,0:41:53.99:0,54,542	0/0:27,0:28:18.37:0,18,354	0/0:22,0:20:8.99:0,9,86	0/0:19,0:19:8.96:0,9,82	0/0:28,0:41:11.95:0,12,95	0/0:16,0:24:20.99:0,21,195	1/1:15,3:18:4.92:55,5,0	1/1:20,15:35:20.95:211,21,0	0/0:12,0:17:6:0,6,51	1/1:23,7:29:11.98:110,12,0	1/1:7,3:9:6.01:65,6,0	0/0:5,0:3:3.01:0,3,43
chr10	6716600	.	T	TG	6811.79	PASS	AB=1.000;AC=35;AF=0.625;AN=56;BaseQRankSum=15.534;DP=458;FS=5.563;HRun=5;HaplotypeScore=206.5655;InbreedingCoeff=0.9149;MQ=60.03;MQ0=0;MQRankSum=-15.040;QD=23.01;ReadPosRankSum=-1.293;VQSLOD=2.1258;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,19:25:56.73:594,57,0	1/1:0,4:4:12.03:134,12,0	0/0:7,0:7:18.01:0,18,179	0/1:12,0:11:11:11,0,133	1/1:1,11:12:15.03:152,15,0	0/0:14,0:14:30.08:0,30,322	0/0:28,0:28:71.81:0,72,706	1/1:7,7:14:35.98:395,36,0	0/0:21,0:21:57.12:0,57,601	1/1:2,15:17:42.11:473,42,0	1/1:6,13:19:42.06:425,42,0	1/1:3,17:20:51.44:576,51,0	1/1:2,17:19:50.77:581,51,0	1/1:4,17:21:56.53:631,57,0	1/1:8,20:27:60.13:633,60,0	0/0:12,0:12:33.04:0,33,342	0/0:24,0:24:66.16:0,66,708	1/1:3,8:11:26.92:268,27,0	0/0:16,0:16:42.09:0,42,443	0/0:14,0:14:27.07:0,27,289	1/1:4,17:21:23.93:247,24,0	0/0:15,0:15:45.11:0,45,484	1/1:4,5:9:18.04:216,18,0	1/1:6,11:17:23.62:252,24,0	0/0:11,0:11:30.07:0,30,322	1/1:6,13:19:38.94:494,39,0	1/1:8,15:23:53.59:592,54,0	1/1:0,4:4:12:137,12,0
chr10	6716610	.	G	GA	1984.63	PASS	AB=1.000;AC=18;AF=0.321;AN=56;BaseQRankSum=7.904;DP=401;FS=7.237;HRun=0;HaplotypeScore=204.7783;InbreedingCoeff=0.8230;MQ=64.20;MQ0=0;MQRankSum=-9.425;QD=15.27;ReadPosRankSum=0.267;VQSLOD=4.4074;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,18:19:50.67:443,51,0	1/1:0,4:4:11.96:95,12,0	0/0:10,0:10:30.03:0,30,372	0/0:14,0:12:22.70:0,23,270	1/1:2,8:10:11.20:110,11,0	0/0:13,0:13:36.10:0,36,470	0/0:25,0:25:64.02:0,64,908	0/1:13,0:13:1.56:2,0,28	0/0:21,0:21:63.19:0,63,845	1/1:0,13:13:38.09:289,38,0	1/1:4,11:15:31.55:249,32,0	0/0:19,0:19:17.75:0,18,64	0/0:16,0:16:19.22:0,19,80	0/0:21,0:21:34.18:0,34,102	1/1:1,20:20:59.54:473,60,0	0/0:10,0:10:27.08:0,27,361	0/0:21,0:21:63.21:0,63,878	1/1:0,10:10:30:271,30,0	0/0:18,0:18:51.17:0,51,701	0/0:11,0:11:27.09:0,27,366	1/1:1,9:10:23.98:240,24,0	0/0:18,0:18:54.17:0,54,733	0/0:6,0:6:10.85:0,11,43	0/1:15,0:15:14.54:15,0,20	0/0:10,0:10:30.09:0,30,402	0/0:16,0:16:24.43:0,24,68	0/0:18,0:18:11.24:0,11,76	0/0:4,0:4:3.70:0,4,13
chr10	6716611	.	G	GGT	9790.72	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=15.155;DP=385;FS=0.816;HRun=0;HaplotypeScore=174.6947;InbreedingCoeff=0.9684;MQ=66.72;MQ0=0;MQRankSum=-15.635;QD=46.18;ReadPosRankSum=1.550;VQSLOD=4.8218;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,0:18:50.63:696,51,0	1/1:0,0:4:12.04:199,12,0	0/0:11,0:11:29.99:0,30,369	0/0:15,0:13:26.88:0,27,288	1/1:1,0:9:14.88:207,15,0	0/0:14,0:14:36.09:0,36,515	0/0:25,0:25:71.80:0,72,1027	1/1:0,10:10:30.10:594,30,0	0/0:20,0:20:60.19:0,60,913	1/1:0,0:13:39.13:648,39,0	1/1:2,0:14:32.94:477,33,0	1/1:1,17:18:51.17:957,51,0	1/1:0,15:15:45.15:840,45,0	1/1:0,19:20:57.40:1033,57,0	1/1:0,0:20:59.76:873,60,0	0/0:9,0:9:24.08:0,24,373	0/0:21,0:21:63.19:0,63,944	1/1:0,0:10:30.03:475,30,0	0/0:18,0:18:51.15:0,51,754	0/0:11,0:11:27.09:0,27,399	1/1:0,0:9:23.91:357,24,0	0/0:18,0:18:54.18:0,54,816	1/1:0,4:4:9.03:176,9,0	1/1:0,11:13:22.62:329,23,0	0/0:11,0:11:27.09:0,27,422	1/1:1,14:15:45.15:868,45,0	1/1:0,16:17:51.17:945,51,0	1/1:0,2:2:6.02:118,6,0
chr10	6716618	.	TGCTGGTCACTTTG	T	15112.05	PASS	AC=32;AF=0.593;AN=54;BaseQRankSum=14.251;DP=367;FS=0.000;HRun=0;HaplotypeScore=224.5305;InbreedingCoeff=0.9648;MQ=67.22;MQ0=0;MQRankSum=-14.392;QD=77.50;ReadPosRankSum=5.813;VQSLOD=4.3072;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,11:17:33.11:1277,33,0	1/1:0,4:4:12.04:472,12,0	0/0:13,0:13:37.01:0,37,1911	0/0:14,0:12:29.92:0,30,1481	1/1:0,7:8:15.05:533,15,0	0/0:14,0:14:36.12:0,36,2224	0/0:29,0:29:79.82:0,80,4692	1/1:5,4:9:12.04:472,12,0	0/0:20,0:20:57.20:0,57,3607	1/1:6,7:13:30.10:1179,30,0	1/1:5,7:14:27.09:1058,27,0	1/1:3,13:16:39.13:1532,39,0	1/1:4,11:15:33.11:1297,33,0	1/1:4,14:18:42.14:1651,42,0	1/1:8,10:18:30.10:1180,30,0	0/0:8,0:8:18.06:0,18,991	0/0:21,0:21:54.18:0,54,3292	1/1:5,4:9:12.04:472,12,0	0/0:15,0:15:42.12:0,42,2163	0/0:9,0:9:21.07:0,21,1186	1/1:4,4:8:12.51:451,13,0	0/0:17,0:17:51.18:0,51,3113	1/1:0,4:4:9.03:354,9,0	1/1:5,7:12:12.04:471,12,0	0/0:10,0:10:30.10:0,30,1759	1/1:4,10:14:30.10:1179,30,0	1/1:3,13:16:39.13:1534,39,0	./.
chr10	6716981	.	G	GC	2628.28	PASS	AC=10;AF=0.185;AN=54;BaseQRankSum=-7.804;DP=561;FS=0.430;HRun=8;HaplotypeScore=59.7736;InbreedingCoeff=0.9536;MQ=84.38;MQ0=1;MQRankSum=-3.034;QD=23.89;ReadPosRankSum=-1.738;VQSLOD=3.5915;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,29:37:53.61:853,54,0	./.	0/0:19,0:18:38.99:0,39,353	0/0:26,1:27:5.76:0,6,379	0/0:13,0:13:24:0,24,219	0/0:19,0:19:48.01:0,48,439	0/0:23,0:23:57.02:0,57,522	1/1:4,22:26:41.70:718,42,0	0/0:24,0:24:69.03:0,69,631	0/0:16,0:16:33:0,33,302	0/0:13,0:13:26.87:0,27,247	0/0:25,0:25:69.03:0,69,631	0/0:21,0:21:60.03:0,60,549	0/0:30,0:30:84.04:0,84,768	0/0:40,0:40:99:0,117,1061	0/0:31,0:31:81.02:0,81,737	0/0:23,0:23:60.02:0,60,549	0/0:18,0:19:56.07:0,56,500	0/0:18,0:19:53.06:0,53,471	0/0:7,0:7:21.01:0,21,192	0/0:31,0:31:93.05:0,93,851	0/0:6,0:6:15.01:0,15,137	0/0:6,0:6:18:0,18,160	0/0:26,0:26:66.03:0,66,604	0/0:12,0:12:33.01:0,33,302	1/1:4,15:20:45.08:492,45,0	1/1:2,21:23:32.98:631,33,0	1/1:0,4:4:9.03:104,9,0
chr10	6717194	.	AG	A	8058.80	PASS	AB=1.000;AC=35;AF=0.625;AN=56;BaseQRankSum=13.504;DP=371;FS=0.440;HRun=1;HaplotypeScore=64.8030;InbreedingCoeff=0.9402;MQ=80.47;MQ0=0;MQRankSum=-1.637;QD=34.89;ReadPosRankSum=2.321;VQSLOD=4.9121;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,15:15:42.14:585,42,0	1/1:0,6:6:15.05:208,15,0	0/0:16,0:15:29.62:0,30,457	0/1:12,0:12:0.93:1,0,294	1/1:0,19:19:51.07:665,51,0	0/0:19,0:19:57.19:0,57,832	0/0:6,0:6:18.06:0,18,262	1/1:0,30:30:90.23:1201,90,0	0/0:11,0:11:33.11:0,33,483	1/1:0,22:21:63.11:805,63,0	1/1:0,15:14:33.11:460,33,0	1/1:0,7:7:21.07:293,21,0	1/1:0,12:12:33.11:459,33,0	1/1:0,10:10:27.09:377,27,0	1/1:0,13:13:36.12:499,36,0	0/0:8,0:8:24.07:0,24,331	0/0:28,0:28:84.25:0,84,1189	1/1:0,10:10:27.09:376,27,0	0/0:20,0:20:60.15:0,60,819	0/0:12,0:12:36.12:0,36,525	1/1:0,6:6:18.06:251,18,0	0/0:8,0:8:24.08:0,24,349	1/1:0,6:6:9.03:123,9,0	1/1:0,7:7:18.06:248,18,0	0/0:12,0:12:36.11:0,36,507	1/1:0,21:20:60.18:819,60,0	1/1:0,14:14:36.08:480,36,0	1/1:0,5:5:15.05:209,15,0
chr10	6717284	.	TG	T	3621.26	PASS	AB=1.000;AC=35;AF=0.625;AN=56;BaseQRankSum=12.183;DP=343;FS=2.075;HRun=1;HaplotypeScore=57.5997;InbreedingCoeff=0.9214;MQ=61.64;MQ0=0;MQRankSum=-2.290;QD=16.17;ReadPosRankSum=0.601;VQSLOD=3.7226;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,9:10:26.77:196,27,0	1/1:1,5:4:11.84:80,12,0	0/0:7,0:7:19.85:0,20,235	0/1:1,0:2:1.28:1,0,2	1/1:4,17:10:12.97:156,13,0	0/0:19,0:19:51.16:0,51,781	0/0:7,0:7:21.06:0,21,312	1/1:11,13:24:49.88:422,50,0	0/0:10,0:10:30.10:0,30,477	1/1:3,13:15:32.09:317,32,0	1/1:3,13:10:29.26:178,29,0	1/1:2,4:6:17.53:125,18,0	1/1:1,5:6:17.70:125,18,0	1/1:0,10:9:25.83:182,26,0	1/1:3,9:10:26.28:191,26,0	0/0:9,0:9:27.08:0,27,408	0/0:14,0:14:42.12:0,42,644	1/1:3,10:13:38.83:306,39,0	0/0:15,0:15:45.15:0,45,698	0/0:14,0:14:39.13:0,39,619	1/1:0,2:2:5.99:48,6,0	0/0:4,0:4:9.03:0,9,143	1/1:2,12:9:26.60:178,27,0	1/1:1,6:7:20.95:169,21,0	0/0:20,0:20:57.19:0,57,909	1/1:4,21:22:59.78:503,60,0	1/1:4,18:18:50.42:380,50,0	1/1:0,10:3:8.92:63,9,0
chr10	6717290	.	AT	A	3914.87	PASS	AC=34;AF=0.630;AN=54;BaseQRankSum=12.467;DP=368;FS=7.457;HRun=1;HaplotypeScore=61.2525;InbreedingCoeff=0.9580;MQ=62.33;MQ0=0;MQRankSum=-4.085;QD=16.59;ReadPosRankSum=1.597;VQSLOD=3.5023;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,9:10:26.77:198,27,0	1/1:0,5:3:8.84:55,9,0	0/0:10,0:10:29.26:0,29,246	./.	1/1:4,17:10:5.83:132,6,0	0/0:19,0:19:53.98:0,54,765	0/0:10,0:10:30.03:0,30,369	1/1:14,13:27:50.70:502,51,0	0/0:11,0:11:33.04:0,33,477	1/1:4,13:15:27.78:313,28,0	1/1:3,13:10:26.25:159,26,0	1/1:2,5:7:20.52:149,21,0	1/1:3,5:8:23.68:173,24,0	1/1:1,10:10:29.44:209,29,0	1/1:3,9:10:26.40:193,26,0	0/0:10,0:10:30.07:0,30,403	0/0:14,0:14:42.12:0,42,607	1/1:4,10:14:41.84:335,42,0	0/0:17,0:17:51.14:0,51,721	0/0:14,0:14:42.13:0,42,620	1/1:1,2:3:8.99:74,9,0	0/0:5,0:5:14.98:0,15,181	1/1:3,12:9:25.94:171,26,0	1/1:1,6:7:20.95:170,21,0	0/0:22,0:22:66.22:0,66,982	1/1:6,21:24:68.10:564,68,0	1/1:6,18:19:53.49:403,53,0	1/1:2,10:5:14.92:113,15,0
chr10	6717293	.	TA	T	1473.43	PASS	AB=1.000;AC=31;AF=0.574;AN=54;BaseQRankSum=14.490;DP=369;FS=10.588;HRun=1;HaplotypeScore=66.0296;InbreedingCoeff=0.6805;MQ=64.60;MQ0=0;MQRankSum=-2.870;QD=6.24;ReadPosRankSum=4.234;VQSLOD=-0.1768;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,0:9:24.02:96,24,0	1/1:5,0:3:8.04:32,8,0	0/0:11,0:11:26.83:0,27,350	./.	1/1:20,0:9:21.32:98,21,0	0/0:20,0:20:54.13:0,54,744	0/0:10,0:10:27.09:0,27,403	1/1:20,5:25:13.05:201,13,0	0/0:12,0:12:36.10:0,36,510	1/1:17,0:15:9.75:150,10,0	1/1:16,0:10:24.22:127,24,0	0/1:9,0:9:38.80:55,0,39	1/1:8,0:8:6.86:66,7,0	1/1:11,0:10:16.13:86,16,0	1/1:11,0:9:18.65:97,19,0	0/0:9,0:9:27.08:0,27,383	0/0:13,0:13:39.13:0,39,581	1/1:14,0:14:24.30:121,24,0	0/0:17,0:17:51.17:0,51,760	0/0:14,0:14:42.14:0,42,620	1/1:3,0:3:2.34:16,2,0	0/0:5,0:5:15.05:0,15,224	1/1:16,0:10:20.20:83,20,0	0/1:8,0:8:8.82:52,0,9	0/0:21,0:21:63.20:0,63,920	0/1:28,0:25:28.44:173,0,28	1/1:24,0:19:41.39:203,41,0	1/1:12,0:5:0.49:20,0,0
chr10	6717889	.	C	CT	4810.82	PASS	AB=1.000;AC=31;AF=0.816;AN=38;BaseQRankSum=-1.835;DP=291;FS=6.498;HRun=6;HaplotypeScore=49.2006;InbreedingCoeff=0.4163;MQ=66.45;MQ0=6;MQRankSum=-4.194;QD=20.47;ReadPosRankSum=6.572;VQSLOD=3.7988;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,25:27:69.22:862,69,0	1/1:0,2:2:6.02:75,6,0	0/0:27,0:17:26.53:0,27,291	0/0:15,0:8:17.95:0,18,156	1/1:0,23:18:45.14:564,45,0	./.	./.	0/1:23,0:23:60.84:73,0,61	./.	1/1:5,12:17:43.12:527,43,0	1/1:0,16:15:36.12:452,36,0	1/1:5,2:6:15.05:186,15,0	1/1:10,3:11:14.99:168,15,0	1/1:8,3:11:21:244,21,0	1/1:3,9:12:27.09:339,27,0	./.	./.	1/1:5,11:15:21.07:264,21,0	./.	./.	1/1:3,14:17:36.12:453,36,0	./.	1/1:8,1:6:12.03:139,12,0	1/1:10,0:10:27.09:339,27,0	./.	0/1:11,0:10:33.90:34,0,49	0/1:16,0:14:37.36:62,0,37	1/1:3,0:3:7.69:29,8,0
chr10	6717895	.	T	TG	2467.51	PASS	AB=1.000;AC=32;AF=0.842;AN=38;BaseQRankSum=-2.874;DP=276;FS=3.953;HRun=7;HaplotypeScore=69.1242;InbreedingCoeff=0.3939;MQ=65.99;MQ0=3;MQRankSum=-4.665;QD=10.59;ReadPosRankSum=6.581;VQSLOD=1.3121;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:26:46.01:290,46,0	1/1:2,0:2:5.86:34,6,0	0/0:26,0:15:11.73:0,12,198	0/0:17,0:9:20.94:0,21,175	1/1:24,0:19:44.35:284,44,0	./.	./.	1/1:15,7:20:33.05:363,33,0	./.	1/1:17,0:16:6.88:115,7,0	1/1:18,0:17:17.92:190,18,0	1/1:6,0:5:13.74:65,14,0	0/1:12,0:10:26.55:43,0,27	1/1:11,0:11:16.42:77,16,0	1/1:10,0:11:4.52:98,5,0	./.	./.	1/1:12,0:12:1.09:64,1,0	./.	./.	0/1:17,0:17:8.80:101,0,9	./.	1/1:9,0:5:8.80:53,9,0	1/1:10,0:10:3.37:80,3,0	./.	1/1:11,1:12:23.93:255,24,0	1/1:17,3:18:41.83:372,42,0	1/1:3,0:3:9.03:107,9,0
chr10	6717905	.	CT	C	1392.01	PASS	AC=18;AF=0.474;AN=38;BaseQRankSum=-2.167;DP=270;FS=5.714;HRun=9;HaplotypeScore=75.6860;InbreedingCoeff=0.8960;MQ=58.44;MQ0=4;MQRankSum=0.526;QD=13.26;ReadPosRankSum=-0.872;VQSLOD=3.3331;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:78.15:0,78,862	0/0:2,0:2:6.02:0,6,69	0/0:22,0:10:2.80:0,3,55	0/0:18,0:8:17.68:0,18,167	0/0:23,0:18:45.13:0,45,519	./.	./.	1/1:16,2:15:11.93:104,12,0	./.	0/0:15,0:13:36.11:0,36,414	0/0:17,0:16:42.08:0,42,469	1/1:5,1:5:12:107,12,0	1/1:6,4:8:15:136,15,0	1/1:10,1:11:15:137,15,0	0/0:11,0:11:17.46:0,17,299	./.	./.	0/0:13,0:13:36.11:0,36,414	./.	./.	0/0:15,0:15:42.12:0,42,485	./.	1/1:8,1:5:9:82,9,0	1/1:14,3:17:44.98:406,45,0	./.	1/1:8,3:10:27.01:245,27,0	1/1:15,5:18:35.50:264,35,0	1/1:3,0:3:9:81,9,0
chr10	6718734	.	AG	A	2362.54	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=11.380;DP=783;FS=6.020;HRun=2;HaplotypeScore=113.3167;InbreedingCoeff=0.9952;MQ=53.84;MQ0=13;MQRankSum=-3.618;QD=24.87;ReadPosRankSum=-0.220;VQSLOD=3.0215;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:55:99:0,169,2466	0/0:12,0:11:30.10:0,30,449	0/0:19,0:7:20.63:0,21,235	0/0:29,0:9:18.13:0,18,271	0/0:22,0:20:60.12:0,60,869	0/0:15,0:15:45.14:0,45,655	0/0:29,0:29:78.26:0,78,1167	1/1:6,24:24:46.18:784,46,0	0/0:25,0:25:75.21:0,75,1062	0/0:21,0:21:60.20:0,60,882	0/0:26,0:24:66.22:0,66,979	0/0:34,0:34:96.32:0,96,1420	0/0:27,0:26:75.24:0,75,1098	0/0:33,0:31:93.26:0,93,1352	0/0:34,0:34:93.28:0,93,1332	0/0:37,0:36:99:0,108,1596	0/0:49,0:49:99:0,144,2134	0/0:38,0:38:99:0,105,1528	0/0:22,0:17:51.09:0,51,692	0/0:22,0:17:42.13:0,42,609	0/0:38,0:37:99:0,102,1506	0/0:24,0:22:60.12:0,60,867	0/0:19,0:17:48.16:0,48,718	0/0:34,0:34:99:0,102,1526	0/0:23,0:14:42.07:0,42,596	1/1:5,33:31:36.23:921,36,0	1/1:2,18:17:42.14:545,42,0	1/1:0,7:7:21.07:273,21,0
chr10	6719799	.	A	AGGAACTGACTCAAT	29404.16	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-2.643;DP=467;FS=0.408;HRun=0;HaplotypeScore=163.4690;InbreedingCoeff=0.9767;MQ=56.05;MQ0=2;MQRankSum=-15.249;QD=147.02;ReadPosRankSum=0.210;VQSLOD=4.9550;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:12,10:20:54.10:3070,54,0	1/1:3,4:7:21.03:1124,21,0	0/0:22,0:19:54.14:0,54,1832	0/0:18,0:18:48.10:0,48,1572	1/1:12,17:29:69.23:4105,69,0	0/0:21,0:21:57.18:0,57,2109	0/0:22,0:22:66.20:0,66,2427	0/0:32,0:31:90.29:0,90,3170	0/0:13,0:13:33.11:0,33,1408	1/1:9,8:17:45.15:2919,45,0	1/1:9,8:16:45.13:2464,45,0	1/1:6,9:15:39.13:2548,39,0	1/1:6,3:9:27.07:1304,27,0	1/1:8,8:16:42.14:2798,42,0	1/1:5,11:16:48.12:2995,48,0	0/0:12,0:12:36.11:0,36,1377	0/0:29,0:29:87.30:0,87,3373	1/1:10,4:14:42.10:2338,42,0	0/0:21,0:20:57.20:0,57,2113	0/0:13,0:13:39.12:0,39,1479	1/1:6,3:7:8.99:270,9,0	0/0:6,0:6:15.05:0,15,640	1/1:11,8:20:57.15:2998,57,0	1/1:6,1:7:12:470,12,0	0/0:18,0:18:54.19:0,54,2215	0/0:16,0:16:45.15:0,45,1891	0/0:21,0:21:63.22:0,63,2473	0/0:3,0:3:9.01:0,9,236
chr10	6719847	.	CT	C	3097.05	PASS	AB=0.944;AC=27;AF=0.482;AN=56;BaseQRankSum=11.894;DP=439;FS=1.400;HRun=11;HaplotypeScore=87.1036;InbreedingCoeff=0.8589;MQ=65.65;MQ0=3;MQRankSum=-7.494;QD=15.18;ReadPosRankSum=1.581;VQSLOD=4.2732;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,16:20:32.95:271,33,0	1/1:1,2:3:5.99:49,6,0	0/1:15,1:12:3.38:3,0,120	0/0:17,1:11:0.10:0,0,68	1/1:5,28:33:68.81:560,69,0	0/0:21,0:21:48.12:0,48,512	0/0:13,0:13:27.07:0,27,288	0/0:31,0:29:68.17:0,68,690	0/0:10,0:10:24.06:0,24,256	1/1:2,14:16:38.88:320,39,0	1/1:3,13:16:38.04:318,38,0	1/1:4,11:14:29.85:234,30,0	1/1:2,7:9:20.97:172,21,0	1/1:1,9:10:26.97:221,27,0	1/1:6,11:17:38.90:314,39,0	0/0:6,0:6:12.03:0,12,128	0/0:22,0:22:63.16:0,63,669	1/1:3,13:16:35.95:295,36,0	0/0:23,0:21:48.07:0,48,487	0/0:13,0:13:30.06:0,30,312	1/1:2,9:11:6.56:192,7,0	0/0:4,0:4:6.02:0,6,64	1/1:3,12:15:38.76:299,39,0	1/1:0,4:4:8.92:66,9,0	0/0:17,1:19:17.28:0,17,366	0/0:15,0:15:39.09:0,39,410	0/0:28,0:28:75.15:0,75,776	0/0:12,0:12:33.08:0,33,352
chr10	6720046	.	ATC	A	140.54	PASS	AB=1.000;AC=6;AF=0.111;AN=54;BaseQRankSum=4.749;DP=465;FS=7.373;HRun=0;HaplotypeScore=71.6870;InbreedingCoeff=0.5449;MQ=55.63;MQ0=9;MQRankSum=-3.783;QD=5.21;ReadPosRankSum=-2.562;VQSLOD=1.2573;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:54:99:0,135,2373	./.	0/0:14,0:5:12.04:0,12,216	0/0:26,0:16:44.89:0,45,759	0/0:7,0:6:2.68:0,3,11	0/0:24,0:24:63.20:0,63,1097	0/0:20,0:20:54.19:0,54,972	0/0:30,0:26:78.27:0,78,1404	0/0:12,0:12:27.09:0,27,486	1/1:6,4:10:14.98:155,15,0	0/1:4,0:3:7.23:27,0,7	0/0:17,0:16:39.13:0,39,702	0/0:14,0:14:42.14:0,42,754	0/0:21,0:21:54.19:0,54,972	0/1:9,0:9:21.88:22,0,25	0/0:6,0:6:18.06:0,18,324	0/0:33,0:33:81.28:0,81,1458	0/0:4,0:4:7.88:0,8,57	0/0:18,0:17:45.14:0,45,770	0/0:17,0:17:48.16:0,48,864	1/1:3,1:3:6.01:61,6,0	0/0:13,0:13:39.13:0,39,700	0/0:16,0:15:39.13:0,39,700	0/0:32,0:32:87.30:0,87,1566	0/0:12,0:12:36.11:0,36,619	0/0:20,0:20:54.19:0,54,972	0/0:16,0:16:48.16:0,48,863	0/0:7,0:7:15.05:0,15,270
chr10	6720048	.	C	CTCCACTTATCTTAACCACTGAACA	7628.94	PASS	AB=0.550;AC=13;AF=0.232;AN=56;BaseQRankSum=2.765;DP=491;FS=18.457;HRun=0;HaplotypeScore=262.3586;InbreedingCoeff=0.8461;MQ=54.93;MQ0=9;MQRankSum=-8.562;QD=119.20;ReadPosRankSum=-1.765;VQSLOD=2.5627;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:52:99:0,135,7039	1/1:4,0:4:6.02:416,6,0	0/0:14,0:5:12.04:0,12,618	0/0:27,0:16:45.11:0,45,1696	1/1:7,1:10:15.05:980,15,0	0/0:23,0:23:63.20:0,63,3711	0/0:22,0:22:57.18:0,57,3111	0/0:31,0:28:84.24:0,84,3893	0/0:13,0:13:27.09:0,27,1301	1/1:11,0:11:27.08:1656,27,0	1/1:2,2:9:9.03:827,9,0	0/0:18,0:17:39.13:0,39,2055	0/0:14,0:14:42.14:0,42,2448	0/0:24,0:24:57.18:0,57,3129	1/1:5,4:12:27.09:2298,27,0	0/0:7,0:7:18.06:0,18,961	0/0:33,0:33:77.62:0,78,4340	0/1:2,2:11:65.58:862,0,66	0/0:18,0:17:44.74:0,45,2128	0/0:17,0:17:48.16:0,48,2958	1/1:5,0:5:12.04:590,12,0	0/0:13,0:13:39.13:0,39,2132	0/0:16,0:15:39.13:0,39,2148	0/0:32,0:32:90.29:0,90,5084	0/0:12,0:12:36.11:0,36,1805	0/0:19,0:19:54.19:0,54,3235	0/0:16,0:16:48.16:0,48,2988	0/0:5,0:5:15.05:0,15,837
chr10	6720275	.	ATGT	A	1299.70	PASS	AB=0.782;AC=7;AF=0.125;AN=56;BaseQRankSum=3.786;DP=659;FS=5.363;HRun=0;HaplotypeScore=241.2859;InbreedingCoeff=-0.2065;MQ=58.48;MQ0=29;MQRankSum=-5.762;QD=7.38;ReadPosRankSum=0.611;VQSLOD=2.5005;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:29.93:0,30,716	0/0:4,0:4:6.02:0,6,125	0/0:100,0:33:96.06:0,96,2084	0/0:94,0:34:80.92:0,81,1842	0/0:4,1:4:3.48:0,3,75	0/0:17,5:22:27.50:0,27,568	0/0:15,10:25:16.66:0,17,335	0/0:24,2:26:19.29:0,19,1607	0/1:17,7:24:74.37:74,0,582	0/1:12,3:15:99:148,0,516	0/0:8,1:8:2.80:0,3,73	0/0:20,4:24:33.43:0,33,599	0/1:22,9:31:99:147,0,935	0/0:21,7:28:37.05:0,37,672	0/0:14,6:20:10.23:0,10,198	0/0:8,4:12:10.92:0,11,195	0/1:21,6:27:38.27:38,0,947	0/0:12,0:12:33.11:0,33,736	0/1:23,2:25:35.23:35,0,1399	0/0:2,0:2:3.01:0,3,74	0/0:26,0:26:26.96:0,27,607	0/0:11,4:15:4.34:0,4,68	0/0:6,1:6:3.48:0,3,62	0/0:15,3:18:5.35:0,5,124	0/0:4,0:4:3.01:0,3,57	0/1:16,15:31:99:745,0,969	0/1:12,11:23:99:237,0,331	0/0:4,0:4:12.04:0,12,294
chr10	6720278	.	TCA	T	1248.25	PASS	AB=0.966;AC=31;AF=0.574;AN=54;BaseQRankSum=4.804;DP=716;FS=9.131;HRun=0;HaplotypeScore=268.2151;InbreedingCoeff=0.2891;MQ=55.58;MQ0=32;MQRankSum=0.409;QD=3.15;ReadPosRankSum=2.773;VQSLOD=1.1829;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:25:2.04:19,0,2	1/1:4,0:4:2.98:21,3,0	0/0:100,0:33:45.02:0,45,604	0/0:96,1:33:40.31:0,40,557	0/1:5,0:4:0:0,0,0	1/1:22,3:25:17.75:140,18,0	1/1:28,3:31:6.65:46,7,0	0/0:35,0:33:35.88:0,36,320	0/1:19,7:26:17.31:129,0,17	0/1:19,0:18:49.49:49,0,77	1/1:9,0:7:2.50:9,2,0	1/1:26,0:26:14.36:163,14,0	0/1:34,0:34:14.70:217,0,15	1/1:31,0:31:21.71:189,22,0	1/1:23,0:23:3.97:45,4,0	1/1:15,1:16:10.69:55,11,0	1/1:23,4:27:2.52:114,3,0	0/1:14,0:14:41.05:41,0,74	0/1:25,3:27:69.90:118,0,70	0/1:3,0:3:0:0,0,0	0/1:25,0:25:0.04:0,0,0	1/1:13,3:16:4.70:29,5,0	1/1:9,0:8:2.97:24,3,0	0/0:20,0:20:1.64:0,2,6	./.	0/0:34,0:34:37.84:0,38,373	0/0:25,0:25:20.89:0,21,126	0/0:4,0:4:2.95:0,3,19
chr10	6720286	.	A	ACACTCGTG	8946.13	PASS	AB=0.923;AC=36;AF=0.692;AN=52;BaseQRankSum=-4.019;DP=755;FS=0.472;HRun=0;HaplotypeScore=325.8785;InbreedingCoeff=-0.0997;MQ=47.83;MQ0=40;MQRankSum=2.640;QD=16.91;ReadPosRankSum=3.291;VQSLOD=2.8446;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:33,0:33:1.27:607,1,0	1/1:2,1:3:6.02:197,6,0	0/0:108,0:30:63.99:0,64,1480	0/0:105,0:32:61.41:0,61,1310	./.	1/1:24,0:26:24.05:438,24,0	0/1:32,0:32:60.68:131,0,61	0/1:38,0:36:99:386,0,192	0/1:26,0:28:65.96:448,0,66	0/1:15,3:17:99:595,0,172	1/1:8,1:6:2.67:102,3,0	0/1:20,9:30:19.79:711,0,20	0/1:26,8:34:8.36:1204,0,8	1/1:22,8:31:28.91:827,29,0	1/1:20,4:24:4.72:215,5,0	1/1:16,0:18:6.02:146,6,0	1/1:25,0:28:24.69:565,25,0	0/1:13,2:15:4.27:727,0,4	0/1:28,0:26:76.84:731,0,77	0/0:4,0:4:0.47:0,0,1	1/1:24,0:24:4.74:115,5,0	1/1:17,0:18:2.39:61,2,0	1/1:11,0:10:2.67:104,3,0	1/1:18,2:20:3.12:104,3,0	./.	0/1:32,0:32:99:316,0,343	0/1:25,0:25:86.61:131,0,87	1/1:4,0:4:8.91:82,9,0
chr10	6720288	.	A	ACTCGTG	7799.21	PASS	AB=0.964;AC=33;AF=0.635;AN=52;BaseQRankSum=-3.067;DP=749;FS=1.516;HRun=0;HaplotypeScore=300.5672;InbreedingCoeff=-0.2607;MQ=46.48;MQ0=41;MQRankSum=2.545;QD=15.03;ReadPosRankSum=3.021;VQSLOD=3.6826;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:27,6:33:35.30:422,0,35	1/1:3,0:3:6.02:160,6,0	0/0:112,0:32:67.51:0,68,1437	0/0:106,0:32:65.18:0,65,1363	./.	1/1:25,0:26:24.99:421,25,0	0/1:30,0:31:60.29:113,0,60	0/1:36,0:34:99:333,0,543	0/1:27,0:28:82.26:450,0,82	0/1:17,0:17:99:482,0,243	1/1:8,0:5:3.01:102,3,0	0/1:28,1:29:27.71:668,0,28	0/1:32,2:34:37.84:1101,0,38	1/1:29,1:30:28.76:721,29,0	0/1:24,0:24:12.24:204,0,12	1/1:18,0:18:5.50:134,6,0	1/1:26,0:27:3.27:486,3,0	0/1:12,1:13:99:554,0,192	0/1:28,0:27:99:681,0,192	0/0:3,0:3:0:0,0,0	0/1:24,0:24:28.57:109,0,29	1/1:18,0:18:2:61,2,0	1/1:11,0:10:2.69:84,3,0	1/1:18,2:20:2:78,2,0	./.	0/1:30,0:30:99:281,0,524	0/1:25,0:25:89.16:89,0,139	1/1:4,0:4:8.89:64,9,0
chr10	6720289	.	C	CTCGT	4104.09	PASS	AB=0.990;AC=30;AF=0.556;AN=54;BaseQRankSum=-0.320;DP=711;FS=0.000;HRun=0;HaplotypeScore=285.3391;InbreedingCoeff=-0.2777;MQ=47.04;MQ0=41;MQRankSum=2.566;QD=8.79;ReadPosRankSum=5.152;VQSLOD=2.2092;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:25,3:28:35.34:368,0,35	1/1:3,0:3:6.02:96,6,0	0/0:110,0:31:57.66:0,58,1299	0/0:106,0:31:68.77:0,69,1291	0/0:4,0:3:0:0,0,0	1/1:24,0:24:17.33:199,17,0	0/1:31,0:31:46.52:49,0,47	0/1:31,0:29:92.85:93,0,541	0/1:28,0:28:86.08:251,0,86	0/1:18,0:17:99:331,0,205	1/1:8,0:5:3.01:77,3,0	0/1:28,0:28:26.58:309,0,27	0/1:33,0:33:10.53:586,0,11	1/1:28,1:29:25.37:355,25,0	0/1:20,1:21:31.06:121,0,31	1/1:17,0:17:1.57:20,2,0	0/1:26,0:26:24.55:320,0,25	0/1:12,0:12:99:293,0,150	0/1:26,0:24:99:340,0,143	0/0:3,0:3:0.63:0,1,2	0/1:21,0:21:19.23:19,0,32	1/1:18,0:18:1.84:42,2,0	1/1:10,1:10:1.27:62,1,0	0/0:17,1:18:0.41:0,0,2	./.	0/1:27,0:27:99:122,0,441	0/1:24,0:24:25.32:25,0,114	1/1:3,0:3:6.19:25,6,0
chr10	6720291	.	C	CGT	1030.24	PASS	AB=0.981;AC=26;AF=0.481;AN=54;BaseQRankSum=6.025;DP=705;FS=0.000;HRun=0;HaplotypeScore=286.5579;InbreedingCoeff=-0.0434;MQ=46.42;MQ0=41;MQRankSum=-0.846;QD=2.86;ReadPosRankSum=0.000;VQSLOD=1.6969;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:26,1:27:18.48:233,0,18	1/1:2,1:3:5.05:39,5,0	0/0:112,0:32:55.39:0,55,1008	0/0:107,0:31:68.36:0,68,949	0/0:3,1:3:0:0,0,0	0/1:25,0:25:13.76:14,0,27	0/1:30,0:30:20.63:21,0,27	0/0:31,0:29:14.99:0,15,464	0/1:27,0:27:15.36:15,0,123	0/1:18,0:17:99:132,0,199	1/1:7,1:5:3.01:52,3,0	0/1:26,0:26:30.27:99,0,30	0/1:30,0:32:41.98:189,0,42	1/1:27,0:28:16.36:120,16,0	0/1:20,1:21:26.22:61,0,26	0/0:17,0:17:1.69:0,2,6	0/1:27,0:27:16.06:16,0,126	0/1:10,2:12:99:117,0,118	0/1:23,0:21:3.67:4,0,184	1/1:3,0:3:0.88:2,1,0	0/0:18,2:20:3.48:0,3,38	1/1:19,0:19:3.16:21,3,0	1/1:9,1:9:3.51:40,4,0	1/1:18,0:18:0.79:2,1,0	./.	0/0:26,0:26:36.24:0,36,575	0/0:25,0:25:13.23:0,13,178	0/1:3,0:3:1.02:3,0,1
chr10	6720296	.	TCA	T	2140.21	PASS	AB=0.884;AC=34;AF=0.630;AN=54;BaseQRankSum=5.284;DP=659;FS=2.558;HRun=0;HaplotypeScore=268.7905;InbreedingCoeff=0.0488;MQ=39.97;MQ0=40;MQRankSum=-3.346;QD=4.76;ReadPosRankSum=1.644;VQSLOD=2.9574;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:17,9:27:4.81:34,0,5	1/1:2,0:2:0.89:2,1,0	0/0:103,0:30:43.61:0,44,673	0/0:96,0:26:42.75:0,43,707	0/1:3,0:2:0:0,0,0	1/1:19,4:23:0.61:113,1,0	1/1:25,5:30:4.88:40,5,0	0/1:32,1:31:99:278,0,291	1/1:23,4:27:7.60:123,8,0	0/1:13,2:14:17.48:156,0,17	0/0:6,0:3:1.25:0,1,3	1/1:21,4:25:17.96:139,18,0	0/1:22,7:31:3.88:324,0,4	1/1:22,3:26:21.69:127,22,0	1/1:16,5:21:6.48:73,6,0	1/1:14,3:17:13.33:58,13,0	0/1:24,1:25:3.91:161,0,4	0/1:10,1:12:10.96:11,0,32	0/1:18,1:17:26.63:115,0,27	0/1:1,2:3:0.08:0,0,0	1/1:17,1:18:2.97:33,3,0	1/1:13,6:19:2.50:7,2,0	1/1:8,2:9:0.24:1,0,0	0/1:16,1:17:0.31:5,0,0	./.	0/1:23,1:24:29.97:289,0,30	0/1:18,4:23:28.83:192,0,29	0/0:2,0:2:2.96:0,3,19
chr10	6720310	.	ACT	A	1324.43	PASS	AB=0.991;AC=25;AF=0.463;AN=54;BaseQRankSum=8.738;DP=631;FS=10.258;HRun=0;HaplotypeScore=277.4402;InbreedingCoeff=-0.1660;MQ=33.30;MQ0=30;MQRankSum=-3.597;QD=3.27;ReadPosRankSum=-3.533;VQSLOD=0.7408;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:24,1:25:3.89:168,4,0	1/1:1,0:1:2.98:22,3,0	0/0:66,1:19:44.86:0,45,729	0/0:71,0:20:35.38:0,35,712	0/1:2,0:1:0:0,0,0	0/1:25,0:25:94.11:94,0,202	0/1:28,0:28:11.68:12,0,96	0/1:38,2:39:40.69:41,0,757	0/1:29,0:29:76.83:77,0,186	0/1:17,0:16:63.88:64,0,313	1/1:6,0:2:1.55:4,2,0	0/1:28,0:28:6.77:176,0,7	0/1:31,0:31:99:235,0,164	1/1:27,0:27:9.52:174,10,0	0/1:25,0:25:60.50:69,0,61	0/1:20,0:20:34.58:35,0,155	0/1:27,0:27:99:143,0,179	0/1:10,1:11:73.87:74,0,137	0/1:18,0:16:61.75:62,0,346	0/0:7,0:7:1.96:0,2,115	0/1:19,0:19:5.84:6,0,13	1/1:17,0:17:5.09:18,5,0	0/1:9,0:9:0.99:1,0,2	0/0:17,0:17:0.91:0,1,13	0/0:5,0:5:7.32:0,7,91	0/0:31,0:31:50.86:0,51,891	0/0:22,1:23:15.08:0,15,391	./.
chr10	6720319	.	CAT	C	2486.04	PASS	AB=0.915;AC=26;AF=0.481;AN=54;BaseQRankSum=9.633;DP=591;FS=2.842;HRun=0;HaplotypeScore=272.8407;InbreedingCoeff=-0.2476;MQ=36.77;MQ0=20;MQRankSum=-4.401;QD=6.44;ReadPosRankSum=-9.571;VQSLOD=0.9241;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:27:9.17:276,9,0	1/1:1,1:2:5.88:37,6,0	0/0:57,1:18:53.90:0,54,913	0/0:54,1:20:51.88:0,52,830	0/0:3,1:3:0.59:0,1,7	0/1:23,3:26:99:244,0,224	0/1:27,0:27:77.39:77,0,129	0/0:31,0:31:40.05:0,40,1206	0/1:25,3:28:99:150,0,295	0/1:13,1:13:25.92:26,0,458	1/1:6,0:2:2.96:19,3,0	0/1:18,5:23:26.81:254,0,27	0/1:24,7:31:99:324,0,304	0/1:17,6:23:2.02:253,0,2	0/1:23,3:26:59.42:267,0,59	0/1:17,1:18:99:129,0,161	0/1:22,3:26:99:174,0,314	0/1:9,2:11:99:104,0,191	0/1:22,0:20:44.42:44,0,609	0/1:8,0:8:14.46:14,0,160	0/1:20,0:20:10.87:70,0,11	1/1:15,1:16:19.03:94,19,0	1/1:11,0:11:3.97:45,4,0	0/1:15,2:17:6.99:39,0,7	0/1:4,0:4:4.73:5,0,96	0/0:30,0:30:48.20:0,48,1118	0/0:25,0:25:1.94:0,2,547	./.
chr10	6720327	.	C	CACAT	19352.63	PASS	AB=0.647;AC=46;AF=0.852;AN=54;BaseQRankSum=-3.070;DP=611;FS=4.175;HRun=0;HaplotypeScore=227.7796;InbreedingCoeff=0.3136;MQ=44.38;MQ0=14;MQRankSum=-3.461;QD=37.29;ReadPosRankSum=-0.089;VQSLOD=4.6265;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,22:31:15.24:720,15,0	1/1:0,2:2:3.01:77,3,0	0/0:49,0:19:44.94:0,45,655	0/0:43,0:22:48.01:0,48,691	1/1:2,6:7:3.01:77,3,0	1/1:6,20:27:27.53:1235,28,0	1/1:14,14:28:38.48:823,38,0	1/1:6,27:36:95.55:1809,96,0	1/1:12,16:28:39.43:1094,39,0	1/1:2,11:13:25.66:727,26,0	1/1:3,3:2:3.01:77,3,0	0/1:10,13:24:17:703,0,17	0/1:11,20:31:42.18:991,0,42	0/1:10,16:27:13.92:774,0,14	1/1:4,24:28:55.12:1472,55,0	1/1:2,17:20:39.39:1214,39,0	1/1:17,10:27:8.03:688,8,0	0/1:7,4:11:7.07:277,0,7	1/1:5,16:21:29.31:1112,29,0	1/1:2,9:12:21.07:533,21,0	1/1:11,10:23:8.39:210,8,0	1/1:5,13:18:26.89:673,27,0	1/1:1,10:11:14.79:383,15,0	1/1:5,16:24:8.51:222,9,0	1/1:0,7:7:15.05:388,15,0	1/1:8,20:28:74.63:1683,75,0	1/1:7,18:26:56.93:1388,57,0	./.
chr10	6721433	.	CT	C	10218.68	PASS	AB=0.741;AC=52;AF=0.929;AN=56;BaseQRankSum=-3.380;DP=552;FS=19.503;HRun=11;HaplotypeScore=65.6453;InbreedingCoeff=0.3436;MQ=67.54;MQ0=1;MQRankSum=-1.758;QD=19.03;ReadPosRankSum=3.978;VQSLOD=4.1151;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,32:36:91.91:745,92,0	1/1:2,5:7:14.98:123,15,0	0/1:16,1:16:8.42:8,0,133	0/0:15,0:12:1.74:0,2,166	1/1:4,19:23:56.92:468,57,0	1/1:0,23:25:61.01:480,61,0	1/1:1,18:19:47.93:394,48,0	1/1:6,14:21:43.96:347,44,0	1/1:1,20:22:55.95:449,56,0	0/1:2,11:14:10.73:233,0,11	1/1:3,15:18:41.85:336,42,0	1/1:2,17:19:50.94:419,51,0	1/1:2,18:20:50.86:411,51,0	1/1:2,13:16:32:252,32,0	1/1:1,22:23:56.93:468,57,0	1/1:2,10:12:29.96:246,30,0	1/1:5,31:37:88.93:720,89,0	1/1:4,15:22:51.05:387,51,0	1/1:4,19:25:60.80:468,61,0	1/1:4,16:21:37.01:357,37,0	1/1:3,16:19:30.98:353,31,0	1/1:1,14:15:38.91:314,39,0	1/1:0,19:19:53.94:443,54,0	1/1:1,13:14:32.96:271,33,0	1/1:2,21:23:53.94:443,54,0	1/1:2,20:22:59.93:492,60,0	1/1:2,22:24:59.88:492,60,0	1/1:0,4:4:11.99:98,12,0
chr10	6721572	.	TAGG	T	6103.03	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=12.040;DP=548;FS=2.238;HRun=0;HaplotypeScore=79.5824;InbreedingCoeff=0.9949;MQ=83.35;MQ0=0;MQRankSum=-1.368;QD=40.15;ReadPosRankSum=4.805;VQSLOD=5.5985;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,114,2583	0/0:6,0:6:15.05:0,15,340	0/0:16,0:16:45.15:0,45,1020	0/0:18,0:19:52.39:0,52,1094	0/0:27,0:27:81.26:0,81,1780	1/1:0,22:22:48.12:757,48,0	1/1:2,14:16:39.13:649,39,0	0/0:42,0:42:99:0,123,2700	1/1:1,13:14:36.12:599,36,0	0/0:14,0:14:42.14:0,42,915	0/0:14,0:14:42.14:0,42,911	0/0:17,0:17:51.18:0,51,1139	0/0:18,0:18:54.19:0,54,1223	0/0:12,0:12:33.11:0,33,746	0/0:16,0:16:45.15:0,45,1008	1/1:1,7:8:15.05:250,15,0	1/1:0,23:23:54.18:899,54,0	0/0:25,0:25:72.22:0,72,1586	1/1:1,14:15:42.13:676,42,0	1/1:0,14:14:39.13:623,39,0	0/0:28,0:28:81.28:0,81,1835	1/1:0,17:17:45.15:750,45,0	0/0:16,0:16:42.14:0,42,951	0/0:16,0:16:45.15:0,45,1018	1/1:0,23:23:54.18:899,54,0	0/0:28,0:28:84.27:0,84,1846	0/0:24,0:24:69.21:0,69,1452	0/0:20,0:20:60.21:0,60,1356
chr10	6721786	.	TCTTAACCG	T	682.78	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.107;DP=502;FS=11.490;HRun=0;HaplotypeScore=103.9277;InbreedingCoeff=0.9805;MQ=51.46;MQ0=25;MQRankSum=-5.345;QD=29.69;ReadPosRankSum=0.357;VQSLOD=2.2027;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,20:23:33.04:777,33,0	0/0:9,0:8:24.05:0,24,960	0/0:15,0:7:21.07:0,21,857	0/0:12,0:6:18.06:0,18,733	0/0:16,0:15:39.13:0,39,1742	0/0:28,0:27:60.20:0,60,2371	0/0:12,0:11:27.09:0,27,1179	0/0:27,0:17:48.16:0,48,2075	0/0:10,0:10:30.10:0,30,1293	0/0:18,0:18:51.17:0,51,1895	0/0:20,0:19:54.18:0,54,2218	0/0:19,0:19:48.16:0,48,2143	0/0:12,0:12:36.12:0,36,1511	0/0:17,0:17:51.17:0,51,2127	0/0:10,0:10:30.02:0,30,1125	0/0:12,0:12:33.11:0,33,1265	0/0:30,0:28:66.23:0,66,2658	0/0:24,0:21:45.15:0,45,1910	0/0:23,0:21:60.21:0,60,2565	0/0:12,0:11:33.05:0,33,1310	0/0:23,0:17:33.03:0,33,1261	0/0:10,0:10:30.06:0,30,1212	0/0:19,0:19:54.18:0,54,2299	0/0:29,0:25:48.16:0,48,2043	0/0:16,0:16:45:0,45,1757	0/0:23,0:23:63.20:0,63,2671	0/0:21,0:21:57.19:0,57,2336	0/0:12,0:12:24.08:0,24,1072
chr10	6721989	.	AGGTCATCTCCAGATC	A	3049.80	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=9.546;DP=607;FS=12.954;HRun=0;HaplotypeScore=240.8974;InbreedingCoeff=0.8374;MQ=89.13;MQ0=0;MQRankSum=-6.973;QD=21.48;ReadPosRankSum=-1.948;VQSLOD=1.1299;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,132,8412	1/1:1,3:4:3.01:58,3,0	0/0:24,0:24:46.39:0,46,2405	0/0:26,0:26:49.87:0,50,2743	1/1:4,16:20:7.71:102,8,0	0/0:23,0:23:48.11:0,48,2968	0/0:22,0:22:54.11:0,54,2922	0/0:36,0:36:72.17:0,72,2927	0/0:24,0:24:69.21:0,69,4360	1/1:4,11:15:30.06:1002,30,0	1/1:4,12:16:18.06:496,18,0	0/0:25,0:25:60.16:0,60,3293	0/0:17,0:17:38.86:0,39,2071	0/0:22,0:22:45.15:0,45,2853	1/1:4,16:20:33.11:957,33,0	0/0:16,0:16:45.15:0,45,3054	0/0:28,0:28:69.10:0,69,4670	1/1:5,14:19:15.01:410,15,0	0/0:21,0:21:51.02:0,51,1835	0/0:14,0:14:36.06:0,36,2391	1/1:9,11:20:6.02:184,6,0	0/0:14,0:14:38.96:0,39,2262	0/0:9,0:9:27.08:0,27,1598	0/0:30,0:30:60.17:0,60,3674	0/0:17,0:17:39.08:0,39,2239	0/1:28,0:28:25.46:25,0,3751	0/0:32,0:32:77.84:0,78,4780	0/0:10,0:10:24.08:0,24,1444
chr10	6722210	.	CA	C	6551.96	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=7.822;DP=679;FS=0.313;HRun=4;HaplotypeScore=77.5107;InbreedingCoeff=0.9987;MQ=80.60;MQ0=0;MQRankSum=-1.764;QD=33.26;ReadPosRankSum=1.551;VQSLOD=5.4083;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,99,1369	0/0:15,0:15:45.15:0,45,630	0/0:24,0:24:66.20:0,66,868	0/0:29,0:29:79.06:0,79,1017	0/0:18,0:18:54.09:0,54,729	1/1:1,21:22:63.19:756,63,0	1/1:1,32:33:81.25:972,81,0	0/0:26,0:26:66.21:0,66,896	1/1:2,29:31:90.27:1073,90,0	0/0:33,0:33:93.24:0,93,1277	0/0:22,0:22:63.21:0,63,881	0/0:28,0:28:78.26:0,78,1092	0/0:17,0:17:51.16:0,51,690	0/0:22,0:22:66.20:0,66,905	0/0:34,0:34:99:0,99,1377	1/1:1,13:14:39.12:468,39,0	1/1:2,33:35:93.28:1116,93,0	0/0:23,0:23:66.22:0,66,918	1/1:0,16:16:48.12:546,48,0	1/1:0,11:11:33.03:378,33,0	0/0:50,0:49:99:0,138,1912	1/1:0,17:17:51.11:596,51,0	0/0:18,0:18:51.16:0,51,697	0/0:28,0:28:78.26:0,78,1092	1/1:0,18:18:54.17:648,54,0	0/0:26,0:26:72.24:0,72,1008	0/0:26,0:26:69.23:0,69,966	0/0:9,0:9:18.05:0,18,235
chr10	6723149	.	CT	C	5014.99	PASS	AB=0.917;AC=25;AF=0.446;AN=56;BaseQRankSum=11.164;DP=444;FS=5.189;HRun=10;HaplotypeScore=48.2848;InbreedingCoeff=0.8885;MQ=65.47;MQ0=0;MQRankSum=-0.960;QD=20.98;ReadPosRankSum=3.222;VQSLOD=5.7497;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,32:35:61.84:754,62,0	1/1:2,3:5:8.99:78,9,0	0/0:6,0:6:15.03:0,15,157	0/1:10,0:11:19.95:20,0,120	1/1:3,15:18:41.99:365,42,0	0/0:15,0:15:42.11:0,42,464	0/0:13,0:13:36.09:0,36,390	1/1:5,23:28:39.26:566,39,0	0/0:13,0:13:34.33:0,34,361	1/1:2,18:20:53.99:469,54,0	1/1:0,17:17:44.98:391,45,0	0/0:15,0:15:35.95:0,36,397	0/0:13,0:13:30.07:0,30,324	0/0:12,0:12:24.05:0,24,258	1/1:0,15:15:44.99:391,45,0	0/0:17,0:17:39.11:0,39,431	0/0:18,1:19:28.08:0,28,530	1/1:2,25:27:74.98:651,75,0	0/0:14,1:15:4.02:0,4,273	0/0:23,0:23:51.14:0,51,562	1/1:4,14:18:38.99:339,39,0	0/0:5,0:5:15.04:0,15,166	0/0:10,0:10:30.08:0,30,332	0/0:16,0:16:42.10:0,42,456	0/0:12,1:13:10.03:0,10,326	1/1:0,16:17:50.01:419,50,0	1/1:1,13:14:32.99:286,33,0	1/1:0,14:14:32.99:286,33,0
chr10	6723749	.	AGATGGATG	A	4442.67	PASS	AB=0.784;AC=39;AF=0.813;AN=48;BaseQRankSum=-6.209;DP=566;FS=6.888;HRun=0;HaplotypeScore=165.7790;InbreedingCoeff=0.2931;MQ=61.28;MQ0=15;MQRankSum=-0.606;QD=11.36;ReadPosRankSum=3.702;VQSLOD=3.0384;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	1/1:2,1:3:3.01:74,3,0	./.	./.	0/1:7,11:18:0:0,0,0	1/1:8,12:20:2.97:20,3,0	1/1:13,7:20:1.74:72,2,0	./.	1/1:13,8:21:3.01:74,3,0	1/1:21,5:26:24.08:550,24,0	1/1:14,2:16:5.91:79,6,0	1/1:12,11:23:15.05:361,15,0	1/1:19,8:27:20.99:370,21,0	1/1:14,6:20:15.02:267,15,0	0/1:12,7:19:14.09:14,0,27	1/1:18,1:18:24.03:351,24,0	1/1:11,9:20:4.75:147,5,0	0/1:12,0:12:53.14:68,0,53	1/1:16,6:22:21.02:419,21,0	0/0:6,11:16:0.47:0,0,1	0/0:18,3:20:3.01:0,3,101	1/1:6,7:13:1.99:17,2,0	1/1:16,2:18:12:211,12,0	1/1:22,4:26:8.99:158,9,0	1/1:7,3:10:6:51,6,0	1/1:17,11:28:45.15:1042,45,0	0/0:21,0:26:44.65:0,45,366	1/1:9,1:10:5.99:96,6,0
chr10	6723796	.	TG	T	946.77	PASS	AB=0.892;AC=22;AF=0.423;AN=52;BaseQRankSum=5.885;DP=591;FS=4.146;HRun=2;HaplotypeScore=174.9186;InbreedingCoeff=0.1126;MQ=40.98;MQ0=40;MQRankSum=-0.936;QD=3.09;ReadPosRankSum=1.037;VQSLOD=0.2824;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:32:45.60:0,46,604	1/1:3,3:6:1.27:8,1,0	./.	./.	0/0:23,0:22:29.96:0,30,407	0/0:22,0:20:18.53:0,19,259	1/1:22,0:15:0.06:7,0,0	0/0:40,0:35:99:0,105,1435	0/0:17,0:17:16.73:0,17,329	0/1:21,2:22:99:120,0,210	1/1:15,5:16:1.92:37,2,0	1/1:21,3:24:17.32:132,17,0	0/1:21,7:28:84.56:122,0,85	0/1:17,1:18:70.18:70,0,97	0/1:15,5:20:7.06:7,0,117	1/1:16,3:18:12.02:156,12,0	0/1:19,0:19:1.45:1,0,156	0/1:13,5:17:46.48:46,0,238	0/1:20,0:14:8.10:8,0,237	0/0:23,0:22:21.54:0,22,297	0/0:16,1:14:3.48:0,3,46	0/0:22,0:21:26.97:0,27,351	1/1:10,7:14:10.82:153,11,0	0/1:16,6:20:37.06:55,0,37	0/0:20,0:20:0.44:0,0,2	0/1:21,2:23:99:178,0,257	0/0:37,0:30:26.37:0,26,315	0/1:6,0:6:3.57:4,0,11
chr10	6723801	.	AGAT	A	1035.33	PASS	AB=0.976;AC=25;AF=0.481;AN=52;BaseQRankSum=8.953;DP=614;FS=0.481;HRun=0;HaplotypeScore=189.0596;InbreedingCoeff=-0.0442;MQ=41.27;MQ0=39;MQRankSum=-0.340;QD=2.70;ReadPosRankSum=-2.085;VQSLOD=2.4395;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:32:40.13:0,40,844	1/1:7,0:7:2.89:16,3,0	./.	./.	0/0:23,0:22:32.98:0,33,684	0/1:22,0:20:10.61:11,0,24	1/1:23,0:16:2.88:18,3,0	0/0:45,0:40:92.47:0,92,1578	0/0:16,0:16:10.42:0,10,476	0/1:25,0:23:99:251,0,201	1/1:22,0:18:8.35:67,8,0	1/1:25,1:26:27.65:165,28,0	0/1:21,6:27:55.10:105,0,55	0/1:19,0:19:57.04:57,0,72	0/1:23,1:24:58.55:59,0,139	0/1:18,0:17:0:0,0,0	0/1:20,0:20:47.81:63,0,48	0/1:18,1:18:32.82:33,0,302	0/1:18,0:13:38.29:38,0,353	0/0:24,0:23:27.09:0,27,543	0/1:19,0:16:36.25:40,0,36	0/0:22,0:21:0.18:0,0,546	1/1:19,0:16:5.95:61,6,0	0/1:22,1:21:25.06:25,0,53	0/1:21,0:21:0.03:0,0,0	0/1:24,0:24:99:168,0,114	0/0:37,0:30:47.43:0,47,423	1/1:7,0:7:2.88:16,3,0
chr10	6723804	.	T	TA	1609.54	PASS	AB=0.901;AC=25;AF=0.481;AN=52;BaseQRankSum=6.614;DP=621;FS=4.535;HRun=1;HaplotypeScore=173.6449;InbreedingCoeff=-0.0824;MQ=41.84;MQ0=40;MQRankSum=-0.850;QD=4.18;ReadPosRankSum=-2.769;VQSLOD=-0.6610;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,1:32:44.59:0,45,571	1/1:3,4:7:2.89:16,3,0	./.	./.	0/0:25,0:24:41.97:0,42,549	0/0:17,1:20:20.82:0,21,159	1/1:21,0:15:2.41:17,2,0	0/0:47,0:42:99:0,109,1606	0/1:17,0:17:30.67:31,0,305	0/1:14,12:25:99:500,0,172	1/1:13,6:15:8.37:143,8,0	1/1:20,7:27:27.14:236,27,0	0/1:26,0:26:56.58:96,0,57	0/1:18,1:19:30.94:59,0,31	0/1:18,10:28:99:107,0,107	0/0:3,1:15:0:0,0,0	0/1:13,2:19:49.51:50,0,95	0/1:12,4:17:64.45:64,0,275	0/1:21,0:16:35.28:35,0,296	0/0:23,0:22:27.09:0,27,367	0/1:16,1:16:30.05:40,0,30	0/1:21,1:21:17.96:18,0,348	1/1:9,8:14:6.02:85,6,0	0/1:22,0:21:29.02:74,0,29	0/1:4,0:21:0.01:0,0,0	0/1:24,1:25:99:181,0,161	0/0:40,0:33:55.76:0,56,443	1/1:8,0:7:2.89:16,3,0
chr10	6723849	.	GATAGATAGATGCATAC	G	2774.37	PASS	AB=0.688;AC=5;AF=0.093;AN=54;BaseQRankSum=6.377;DP=624;FS=0.601;HRun=0;HaplotypeScore=243.5073;InbreedingCoeff=0.2845;MQ=53.15;MQ0=18;MQRankSum=-2.211;QD=24.99;ReadPosRankSum=-2.150;VQSLOD=2.4263;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:62.70:0,63,3160	0/0:7,0:7:3.01:0,3,74	0/0:15,0:10:6.55:0,7,383	0/0:16,0:7:11.86:0,12,85	0/0:32,0:32:93.32:0,93,3892	0/0:19,0:17:42.14:0,42,1654	0/0:22,0:17:23.91:0,24,714	1/1:35,0:28:45.07:870,45,0	0/0:19,0:19:48.16:0,48,2279	0/0:33,0:32:93.15:0,93,3247	0/0:22,0:19:39.61:0,40,1356	0/0:24,0:24:36.10:0,36,1650	0/0:24,0:24:54.17:0,54,2173	0/0:18,0:18:35.97:0,36,1263	0/0:26,0:26:45.15:0,45,1755	0/0:23,0:23:27.09:0,27,657	0/1:14,0:14:81.79:82,0,373	0/0:15,0:14:23.63:0,24,654	0/0:17,0:15:45.13:0,45,1721	0/0:17,0:17:45.15:0,45,1812	0/0:19,0:16:24.08:0,24,985	0/0:28,0:28:75.26:0,75,2942	0/0:20,0:18:29.46:0,29,936	0/0:21,0:19:36.12:0,36,1539	0/0:34,0:34:48.16:0,48,1394	0/1:4,21:25:57.15:1429,0,57	0/1:3,34:32:24.53:516,0,25	./.
chr10	6723857	.	GATGCATAC	G	2247.61	PASS	AB=1.000;AC=6;AF=0.111;AN=54;BaseQRankSum=7.358;DP=637;FS=0.000;HRun=0;HaplotypeScore=184.4319;InbreedingCoeff=0.6340;MQ=56.35;MQ0=15;MQRankSum=-1.658;QD=21.41;ReadPosRankSum=-1.575;VQSLOD=2.6624;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:66.21:0,66,1794	0/0:7,0:7:3.01:0,3,74	0/0:18,0:13:14.12:0,14,507	0/0:22,0:10:14.80:0,15,104	0/0:35,0:35:99:0,99,2703	0/0:18,0:17:45.15:0,45,1097	0/0:18,0:16:30.10:0,30,778	1/1:13,22:29:60.07:1069,60,0	0/0:19,0:19:54.19:0,54,1467	0/0:37,0:36:99:0,100,2864	0/0:24,0:22:54.19:0,54,1488	0/0:26,0:26:45.10:0,45,1384	0/0:24,0:24:60.11:0,60,1690	0/0:17,0:18:35.98:0,36,855	0/0:25,0:25:42.14:0,42,1345	0/0:24,0:24:36.12:0,36,858	0/1:13,0:13:0.22:0,0,363	0/0:14,0:13:20.95:0,21,522	0/0:19,0:17:48.15:0,48,1260	0/0:17,0:17:42.13:0,42,1046	0/0:21,0:18:33.11:0,33,959	0/0:29,0:29:75.26:0,75,1929	0/0:20,0:18:33.11:0,33,937	0/0:22,0:20:42.14:0,42,1273	0/0:36,0:36:57.20:0,57,1431	0/1:23,0:23:12.19:1055,0,12	1/1:34,0:29:11.89:248,12,0	./.
chr10	6725909	.	GA	G	3508.18	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=3.949;DP=578;FS=11.592;HRun=12;HaplotypeScore=87.7889;InbreedingCoeff=0.9387;MQ=75.71;MQ0=0;MQRankSum=-0.279;QD=12.53;ReadPosRankSum=2.644;VQSLOD=2.6373;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:29:35.82:0,36,200	0/0:7,0:7:18.04:0,18,183	0/0:31,0:21:12.82:0,13,137	0/0:18,0:12:14.77:0,15,127	0/0:22,1:26:13.85:0,14,459	1/1:3,13:16:35.82:279,36,0	1/1:4,16:20:38.79:302,39,0	1/1:5,0:28:48.62:139,49,0	1/1:8,13:22:28.90:215,29,0	0/0:23,0:23:54.10:0,54,544	0/0:16,2:18:1.62:0,2,380	0/0:2,0:11:11.36:0,11,58	0/0:2,0:14:25.57:0,26,129	0/0:8,0:12:23.36:0,23,121	0/0:30,2:32:28.66:0,29,644	1/1:3,20:23:56.77:441,57,0	1/1:4,24:28:68.73:534,69,0	0/0:16,0:18:47.76:0,48,454	1/1:9,20:29:59.24:447,59,0	1/1:4,14:18:41.83:325,42,0	0/0:22,0:22:34.67:0,35,492	1/1:7,7:14:6.40:145,6,0	0/0:2,0:18:20.09:0,20,102	0/0:5,0:17:28.41:0,28,144	1/1:1,20:21:55.83:424,56,0	1/1:6,0:27:19.74:93,20,0	1/1:6,0:26:40.72:118,41,0	1/1:0,0:8:16.30:47,16,0
chr10	6726260	.	T	TC	7623.45	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-6.044;DP=711;FS=1.817;HRun=4;HaplotypeScore=98.3142;InbreedingCoeff=0.9988;MQ=87.45;MQ0=0;MQRankSum=-6.075;QD=35.62;ReadPosRankSum=1.350;VQSLOD=4.6419;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,123,1395	0/0:9,0:9:27.05:0,27,294	0/0:21,0:21:51.62:0,52,579	0/0:27,0:27:70.37:0,70,788	0/0:25,0:25:66.18:0,66,746	1/1:1,20:21:54.18:739,54,0	1/1:1,37:38:99:1394,102,0	0/0:29,0:29:72.20:0,72,816	1/1:0,25:25:66.22:903,66,0	0/0:27,0:27:69.19:0,69,775	0/0:11,0:11:30.08:0,30,340	0/0:32,0:32:66.57:0,67,984	0/0:19,0:19:57.12:0,57,632	0/0:20,0:20:54.15:0,54,612	0/0:34,0:34:96.27:0,96,1089	1/1:0,22:22:63.21:862,63,0	1/1:2,28:30:75.06:1023,75,0	0/0:38,0:38:99:0,108,1200	1/1:2,11:13:33.11:452,33,0	1/1:0,17:17:45.15:612,45,0	0/0:65,0:65:99:0,177,1987	1/1:5,22:27:66.69:901,67,0	0/0:10,0:10:27.08:0,27,306	0/0:24,1:25:28.12:0,28,694	1/1:1,20:21:54.18:738,54,0	0/0:29,0:29:84.24:0,84,952	0/0:20,0:20:57.16:0,57,646	0/0:8,0:8:21.06:0,21,237
chr10	6727614	.	CGTGTGTGTGTGTGTGTGTGTGTGTGT	C	2090.58	PASS	AB=0.632;AC=9;AF=0.161;AN=56;BaseQRankSum=5.466;DP=584;FS=1.177;HRun=0;HaplotypeScore=282.0613;InbreedingCoeff=0.6712;MQ=49.82;MQ0=22;MQRankSum=-5.096;QD=25.81;ReadPosRankSum=3.157;VQSLOD=2.3115;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:32:35.14:0,35,882	0/0:4,0:4:9.03:0,9,901	0/0:53,0:14:15.05:0,15,394	0/0:49,0:11:15.05:0,15,353	0/0:18,0:19:36.12:0,36,2548	0/0:18,0:20:33.11:0,33,2388	0/0:21,0:21:39.13:0,39,2983	0/0:20,0:17:21.07:0,21,648	0/0:16,0:16:30.57:0,31,2468	0/0:25,0:24:45.11:0,45,3675	0/0:9,0:9:17.09:0,17,1347	1/1:5,6:12:6.02:384,6,0	1/1:6,9:15:2.53:201,3,0	0/1:10,14:24:99:794,0,123	0/0:14,0:15:15.05:0,15,1387	0/0:11,0:11:12.04:0,12,693	0/0:45,0:49:99:0,108,9614	0/0:15,0:27:35.80:0,36,3012	0/0:11,0:11:9.03:0,9,463	0/0:17,0:17:39.13:0,39,3402	0/0:23,0:23:33.11:0,33,2147	0/0:15,0:15:24.08:0,24,2138	1/1:8,4:13:12.04:751,12,0	1/1:6,11:17:3.01:98,3,0	0/0:19,0:21:36.12:0,36,3350	0/0:13,0:14:30.10:0,30,1711	0/0:18,0:21:45.15:0,45,3107	0/0:8,0:8:24.08:0,24,1356
chr10	6728153	.	G	GTCTCCC	5641.84	PASS	AB=0.973;AC=38;AF=0.679;AN=56;BaseQRankSum=2.565;DP=616;FS=48.449;HRun=0;HaplotypeScore=193.1059;InbreedingCoeff=-0.3597;MQ=56.67;MQ0=1;MQRankSum=-4.772;QD=9.78;ReadPosRankSum=-5.722;VQSLOD=0.2747;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:44,0:44:55.57:754,56,0	1/1:5,0:5:3.01:32,3,0	0/1:22,0:14:32.87:42,0,33	0/0:38,0:21:11.49:0,11,72	0/1:14,0:14:72.61:73,0,166	0/1:23,1:24:20.85:163,0,21	1/1:28,0:27:15.20:229,15,0	1/1:27,0:25:18.90:193,19,0	0/1:20,0:20:75.17:205,0,75	0/1:21,0:22:21.83:153,0,22	0/1:13,0:12:53.13:79,0,53	0/1:21,1:21:99:182,0,102	0/1:19,0:19:37.29:183,0,37	0/1:31,1:32:99:334,0,260	0/1:25,0:25:99:148,0,338	0/1:12,1:14:56.31:247,0,56	0/1:16,0:16:70.86:151,0,71	1/1:8,0:8:6:66,6,0	1/1:26,0:23:35.02:407,35,0	1/1:20,0:19:15.02:272,15,0	1/1:29,0:28:7.38:139,7,0	0/1:19,4:26:48.39:169,0,48	0/1:21,0:20:99:105,0,212	1/1:22,0:21:11.89:105,12,0	0/1:19,0:17:40.66:257,0,41	1/1:27,0:27:24.55:441,25,0	0/1:21,0:21:74.70:313,0,75	1/1:9,0:9:7.74:199,8,0
chr10	6728225	.	AC	A	3941.81	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=3.791;DP=624;FS=6.564;HRun=3;HaplotypeScore=96.8332;InbreedingCoeff=0.9864;MQ=76.98;MQ0=0;MQRankSum=0.023;QD=34.28;ReadPosRankSum=1.075;VQSLOD=3.7864;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,129,1827	0/0:3,0:3:9.03:0,9,130	0/0:20,0:19:42.12:0,42,583	0/0:27,0:27:64.85:0,65,880	0/0:22,0:22:60.20:0,60,864	0/0:20,0:20:60.15:0,60,822	0/0:32,0:32:87.25:0,87,1195	0/0:19,0:19:48.15:0,48,675	0/0:24,0:24:69.23:0,69,993	0/0:22,0:22:63.19:0,63,860	0/0:20,0:20:57.19:0,57,809	1/1:1,16:17:45.14:558,45,0	1/1:0,24:24:69.22:855,69,0	1/1:2,23:25:66.21:818,66,0	0/0:26,0:26:78.25:0,78,1105	0/0:20,0:20:57.18:0,57,800	0/0:33,0:33:96.30:0,96,1361	0/0:17,0:17:51.15:0,51,715	0/0:21,0:20:60.20:0,60,863	0/0:22,0:22:63.17:0,63,884	0/0:31,0:31:84.28:0,84,1208	0/0:18,0:18:48.13:0,48,665	1/1:0,23:23:69.22:855,69,0	1/1:0,26:26:69.22:855,69,0	0/0:18,0:18:54.18:0,54,777	0/0:23,0:23:69.23:0,69,994	0/0:14,0:14:42.10:0,42,574	0/0:10,0:10:30.08:0,30,412
chr10	6730627	.	GCACACATA	G	11631.85	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=15.000;DP=524;FS=12.575;HRun=0;HaplotypeScore=142.8114;InbreedingCoeff=0.9965;MQ=58.49;MQ0=0;MQRankSum=-14.265;QD=50.35;ReadPosRankSum=1.663;VQSLOD=4.2921;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,27:27:48.16:1140,48,0	1/1:0,15:15:33.41:731,33,0	0/0:20,0:18:54.02:0,54,1472	0/0:10,0:8:24.06:0,24,721	1/1:0,21:22:42.14:1143,42,0	0/0:19,0:19:54.16:0,54,2155	0/0:18,0:18:51.13:0,51,1843	0/0:30,0:30:90.28:0,90,3407	0/0:21,0:21:60.19:0,60,2548	1/1:0,15:15:45.12:1094,45,0	1/1:0,24:24:45.15:1166,45,0	1/1:1,13:14:29.91:857,30,0	1/1:0,21:21:35.68:1007,36,0	1/1:0,14:14:36.12:1008,36,0	1/1:0,19:18:33.11:955,33,0	0/0:15,0:15:45.13:0,45,1662	0/0:25,0:25:75.26:0,75,3237	1/1:0,15:15:24.08:718,24,0	0/0:19,0:19:57.18:0,57,2206	0/0:19,0:19:54.14:0,54,1995	1/1:0,10:10:15.05:267,15,0	0/0:20,0:20:54.15:0,54,2114	1/1:0,20:20:32.63:913,33,0	1/1:0,15:15:21.43:631,21,0	0/0:11,0:11:33.10:0,33,1412	0/0:22,0:22:66.21:0,66,2699	0/0:32,0:32:93.26:0,93,3924	0/0:12,0:12:36.12:0,36,1576
chr10	6730931	.	T	TA	6210.51	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-13.303;DP=475;FS=1.632;HRun=7;HaplotypeScore=78.5761;InbreedingCoeff=0.9743;MQ=67.12;MQ0=0;MQRankSum=-1.302;QD=27.48;ReadPosRankSum=1.222;VQSLOD=5.5550;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,0:29:63.25:322,63,0	1/1:1,16:17:45.14:544,45,0	0/0:11,0:10:21.02:0,21,198	0/0:15,0:11:24.03:0,24,230	1/1:2,27:29:78.24:942,78,0	0/0:24,0:24:54.01:0,54,648	0/0:7,0:7:12.02:0,12,116	0/0:34,0:34:87.12:0,87,835	0/0:18,0:17:39.06:0,39,376	1/1:2,12:14:36.11:435,36,0	1/1:0,20:20:57.13:670,57,0	1/1:0,10:10:27.08:326,27,0	1/1:1,12:13:36.11:435,36,0	1/1:3,16:19:42.13:507,42,0	1/1:2,6:8:18.06:217,18,0	0/0:4,0:4:12.01:0,12,111	0/0:23,0:23:66.10:0,66,636	1/1:2,17:19:36.11:435,36,0	0/0:19,0:19:54.07:0,54,517	0/0:19,0:19:51.07:0,51,487	1/1:1,9:10:24.07:290,24,0	0/0:3,0:3:6.01:0,6,58	1/1:2,20:22:51.16:616,51,0	1/1:1,15:16:39.12:471,39,0	0/0:22,0:22:54.02:0,54,510	0/0:19,1:20:23.84:0,24,506	0/0:19,0:19:45.07:0,45,435	0/0:11,0:11:26.99:0,27,250
chr10	6731010	.	TGTGA	T	11456.72	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=8.814;DP=561;FS=0.000;HRun=0;HaplotypeScore=108.0731;InbreedingCoeff=0.9992;MQ=59.92;MQ0=1;MQRankSum=-4.317;QD=47.34;ReadPosRankSum=1.544;VQSLOD=5.4202;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,114,3081	0/0:11,0:11:27.09:0,27,725	0/0:26,0:22:63.22:0,63,1636	0/0:25,0:24:66.23:0,66,1736	0/0:26,0:26:66.21:0,66,1694	1/1:1,15:16:39.13:756,39,0	1/1:0,20:20:42.14:814,42,0	1/1:1,20:21:60.16:1041,60,0	1/1:0,20:19:54.19:1043,54,0	0/0:21,0:21:63.22:0,63,1726	0/0:18,0:18:51.18:0,51,1345	0/0:16,0:16:42.13:0,42,1093	0/0:13,0:13:33.11:0,33,904	0/0:23,0:23:66.23:0,66,1732	0/0:12,0:12:36.12:0,36,976	1/1:0,15:15:42.14:814,42,0	1/1:1,27:28:66.23:1279,66,0	0/0:24,0:24:63.22:0,63,1682	1/1:0,10:10:30.05:499,30,0	1/1:0,23:23:51.17:989,51,0	0/0:40,0:40:99:0,120,3268	1/1:0,10:11:33.11:640,33,0	0/0:13,0:13:27.09:0,27,702	0/0:12,0:12:33.11:0,33,904	1/1:0,12:12:24.08:465,24,0	1/1:2,24:26:72.25:1374,72,0	1/1:0,18:18:33.11:640,33,0	1/1:0,22:22:57.20:1105,57,0
chr10	6731608	.	C	CA	16239.25	PASS	AB=1.000;AC=53;AF=0.946;AN=56;BaseQRankSum=-6.589;DP=591;FS=13.674;HRun=8;HaplotypeScore=65.0331;InbreedingCoeff=0.7782;MQ=78.43;MQ0=1;MQRankSum=-5.870;QD=28.29;ReadPosRankSum=2.656;VQSLOD=4.2680;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,32:36:84.25:981,84,0	1/1:1,12:13:33.10:381,33,0	0/0:17,0:17:22.68:0,23,268	0/1:15,0:14:3.25:3,0,112	1/1:2,25:27:75.19:849,75,0	1/1:3,15:18:45.13:519,45,0	1/1:2,15:17:36.11:415,36,0	1/1:3,19:22:57.17:657,57,0	1/1:4,17:22:51.13:576,51,0	1/1:3,27:31:84.24:958,84,0	1/1:3,17:20:45.05:502,45,0	1/1:3,15:18:42.12:484,42,0	1/1:0,11:11:30.09:346,30,0	1/1:4,19:23:51.13:576,51,0	1/1:4,17:21:45.13:519,45,0	1/1:4,16:20:45.13:519,45,0	1/1:0,27:27:78.23:900,78,0	1/1:4,22:26:66.20:762,66,0	1/1:5,20:25:66.15:727,66,0	1/1:1,19:20:54.09:606,54,0	1/1:3,16:19:48.14:554,48,0	1/1:4,14:19:44.97:499,45,0	1/1:0,17:17:45.13:519,45,0	1/1:1,18:20:57:638,57,0	1/1:1,22:23:63.19:727,63,0	1/1:2,34:36:99:1154,102,0	1/1:0,21:21:54.16:623,54,0	1/1:0,7:7:21.06:242,21,0
chr10	6732746	.	T	TAAAA	6871.96	PASS	AB=0.743;AC=38;AF=0.679;AN=56;BaseQRankSum=1.909;DP=553;FS=4.650;HRun=13;HaplotypeScore=124.2736;InbreedingCoeff=0.6530;MQ=67.74;MQ0=2;MQRankSum=-3.328;QD=16.60;ReadPosRankSum=-6.109;VQSLOD=1.1816;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:21:44.80:497,45,0	1/1:3,0:13:23.82:216,24,0	0/1:19,0:15:10.84:11,0,129	0/0:21,0:16:11.01:0,11,96	1/1:7,1:19:35.94:399,36,0	1/1:14,2:18:27.08:412,27,0	1/1:7,4:21:24.08:434,24,0	0/1:11,0:26:24.31:71,0,24	1/1:14,1:17:42.10:631,42,0	1/1:13,0:33:61.74:778,62,0	1/1:6,0:12:17.92:173,18,0	0/0:13,0:14:29.68:0,30,365	0/0:19,0:19:14.72:0,15,409	0/0:8,0:10:11.66:0,12,122	1/1:5,2:28:35.82:426,36,0	1/1:6,7:17:16.36:337,16,0	1/1:10,2:16:15.45:255,15,0	1/1:3,1:11:11.95:157,12,0	1/1:9,9:20:36.09:565,36,0	1/1:17,11:31:39.10:561,39,0	1/1:5,1:14:12.04:180,12,0	1/1:4,7:12:23.99:320,24,0	0/0:22,0:23:23.16:0,23,504	0/0:21,0:20:47.83:0,48,607	1/1:11,10:27:26.25:400,26,0	0/1:8,0:19:47.38:47,0,57	0/0:10,0:30:2.60:0,3,114	0/1:12,0:18:1.81:2,0,133
chr10	6733358	.	G	GTGGTGGTGGTGGTGGTGA	16409.33	PASS	AB=0.939;AC=29;AF=0.537;AN=54;BaseQRankSum=7.325;DP=598;FS=13.059;HRun=0;HaplotypeScore=279.3886;InbreedingCoeff=0.7506;MQ=60.80;MQ0=4;MQRankSum=-10.118;QD=46.22;ReadPosRankSum=-0.722;VQSLOD=2.7451;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:36,2:37:42.76:1295,43,0	1/1:9,0:11:9.80:650,10,0	0/0:27,0:21:18.08:0,18,403	0/0:26,0:22:27:0,27,774	1/1:25,0:25:8.78:103,9,0	0/1:24,1:25:5.13:324,0,5	1/1:22,0:22:18.04:538,18,0	0/0:21,0:21:27.09:0,27,951	1/1:27,6:33:78.63:3167,79,0	1/1:18,1:17:18.06:543,18,0	./.	0/0:21,0:21:60.19:0,60,2670	0/0:20,0:20:45.13:0,45,1687	0/0:21,0:21:48.16:0,48,2216	1/1:15,3:18:2.32:1043,2,0	1/1:18,1:18:45.12:1643,45,0	1/1:25,1:26:24.08:1917,24,0	1/1:9,0:9:14.97:592,15,0	1/1:22,0:21:26.94:1381,27,0	0/1:13,1:14:31.47:634,0,31	1/1:29,0:29:9.46:95,9,0	0/1:22,2:24:6.47:1393,0,6	0/0:17,0:17:30.09:0,30,1308	0/0:29,0:29:66.19:0,66,2758	1/1:19,2:21:30.09:1089,30,0	0/0:21,1:22:39.11:0,39,1313	0/0:20,0:20:54.19:0,54,2205	0/0:12,0:12:30.08:0,30,962
chr10	6733373	.	G	GTGA	3066.65	PASS	AB=0.960;AC=26;AF=0.464;AN=56;BaseQRankSum=8.054;DP=606;FS=15.191;HRun=0;HaplotypeScore=133.7160;InbreedingCoeff=0.4242;MQ=57.44;MQ0=4;MQRankSum=-5.487;QD=8.16;ReadPosRankSum=-3.957;VQSLOD=1.3168;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:40,0:39:16.05:326,0,16	0/1:8,0:8:8.11:76,0,8	0/0:24,0:15:32.22:0,32,424	0/0:27,0:25:47.56:0,48,649	1/1:25,0:25:0.28:43,0,0	1/1:24,0:24:11.77:139,12,0	1/1:26,0:26:6.46:128,6,0	0/0:21,0:21:60.10:0,60,745	1/1:34,0:34:40.11:715,40,0	1/1:23,0:21:3.16:199,3,0	1/1:5,0:4:1.82:5,2,0	0/0:21,0:21:63.18:0,63,1007	0/0:20,0:20:50.88:0,51,739	0/0:19,0:19:51.17:0,51,838	0/1:10,5:16:4.65:153,0,5	1/1:18,0:18:9.37:273,9,0	0/1:28,0:28:1.77:89,0,2	0/1:11,0:11:0.47:32,0,0	0/1:24,0:23:39.19:224,0,39	0/1:15,0:14:5.79:150,0,6	1/1:39,0:39:10.70:102,11,0	0/1:21,1:22:10.26:238,0,10	0/0:13,0:13:36.08:0,36,531	0/0:29,0:29:75.16:0,75,1142	1/1:18,0:17:19.99:359,20,0	0/0:21,0:21:54.09:0,54,709	0/0:22,0:22:66.17:0,66,1004	0/0:12,0:12:35.91:0,36,492
chr10	6733379	.	A	ATGG	6432.84	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=7.106;DP=597;FS=1.227;HRun=0;HaplotypeScore=121.7745;InbreedingCoeff=0.8970;MQ=59.66;MQ0=4;MQRankSum=-11.310;QD=17.97;ReadPosRankSum=-1.415;VQSLOD=4.3168;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:32,4:36:61.05:916,61,0	1/1:5,2:7:17.72:240,18,0	0/0:23,0:14:39.11:0,39,591	0/0:34,0:31:76.80:0,77,1054	1/1:22,0:22:14.52:224,15,0	1/1:2,21:23:8.53:105,9,0	1/1:3,22:26:10.73:115,11,0	0/0:27,0:27:78.25:0,78,1253	1/1:27,6:33:86.38:1252,86,0	1/1:6,18:23:42.64:552,43,0	1/1:7,0:6:3.01:52,3,0	0/0:20,0:20:57.19:0,57,964	0/0:19,0:19:54.14:0,54,819	0/0:18,0:18:54.17:0,54,874	1/1:14,3:17:32.98:531,33,0	1/1:16,1:17:38.76:438,39,0	1/1:0,28:29:8.73:171,9,0	1/1:0,10:10:3.01:37,3,0	1/1:22,0:21:53.23:556,53,0	1/1:11,1:11:26.82:326,27,0	1/1:3,30:33:1.32:5,1,0	1/1:19,2:21:39.27:578,39,0	0/0:11,0:11:33.11:0,33,544	0/0:29,0:29:78.20:0,78,1223	1/1:15,2:16:25.24:335,25,0	0/0:18,1:19:52.48:0,52,744	0/0:27,0:27:81.16:0,81,1220	0/0:12,0:12:30.05:0,30,423
chr10	6733838	.	T	TGA	27271.05	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-1.642;DP=631;FS=8.680;HRun=0;HaplotypeScore=128.2905;InbreedingCoeff=0.9531;MQ=59.05;MQ0=0;MQRankSum=0.412;QD=45.15;ReadPosRankSum=3.215;VQSLOD=5.5128;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,33:37:93.32:1702,93,0	1/1:1,13:14:39.13:713,39,0	0/0:12,0:8:12.04:0,12,161	0/0:15,0:11:27.06:0,27,351	1/1:2,13:15:31.66:551,32,0	1/1:0,15:15:42.14:769,42,0	1/1:3,35:37:99:1811,99,0	1/1:6,18:21:45.15:798,45,0	1/1:0,23:24:63.22:1154,63,0	1/1:2,18:20:51.16:904,51,0	1/1:0,4:4:9.03:164,9,0	1/1:0,25:27:78.27:1416,78,0	1/1:2,17:19:45.15:824,45,0	1/1:4,26:31:72.25:1318,72,0	1/1:2,18:21:51.17:933,51,0	1/1:0,11:13:29.95:549,30,0	1/1:2,33:37:96.33:1758,96,0	1/1:5,26:32:72.25:1312,72,0	1/1:4,18:21:51.17:934,51,0	1/1:1,10:12:33.11:593,33,0	1/1:5,45:50:99:2195,120,0	1/1:0,19:20:54.19:987,54,0	1/1:1,12:13:30.10:548,30,0	1/1:2,39:41:93.01:1704,93,0	1/1:0,18:18:54.19:989,54,0	1/1:2,23:25:66.20:1171,66,0	1/1:1,18:21:51.17:922,51,0	1/1:0,11:11:30.10:549,30,0
chr10	6734137	.	A	AG	25526.80	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=8.300;DP=627;FS=9.406;HRun=0;HaplotypeScore=184.2051;InbreedingCoeff=0.9937;MQ=78.08;MQ0=0;MQRankSum=-9.920;QD=43.12;ReadPosRankSum=5.902;VQSLOD=2.6019;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,63:63:99:2664,169,0	1/1:1,11:12:27.09:431,27,0	0/0:19,0:19:57.13:0,57,757	0/0:16,0:16:48.16:0,48,649	1/1:0,18:18:24.08:384,24,0	1/1:0,18:18:54.18:861,54,0	1/1:0,13:13:30.10:479,30,0	1/1:0,23:23:66.23:1051,66,0	1/1:0,30:30:84.22:1309,84,0	1/1:0,28:28:81.28:1292,81,0	1/1:0,6:6:18.06:287,18,0	1/1:0,29:29:78.26:1232,78,0	1/1:0,22:22:63.21:993,63,0	1/1:1,26:27:75.26:1197,75,0	1/1:0,28:28:78.27:1246,78,0	1/1:0,19:19:57.19:907,57,0	1/1:0,37:37:99:1580,99,0	1/1:0,16:16:45.15:719,45,0	1/1:0,15:15:45.15:718,45,0	1/1:0,23:23:69.23:1080,69,0	1/1:1,22:23:66.22:1032,66,0	1/1:0,24:24:63.21:1004,63,0	1/1:0,18:18:39.13:622,39,0	1/1:0,21:21:63.13:962,63,0	1/1:0,23:23:63.21:1005,63,0	1/1:0,15:15:45.15:712,45,0	1/1:0,31:31:81.27:1282,81,0	1/1:0,10:10:30.10:479,30,0
chr10	6734256	.	TTTATACTTTACATATATA	T	45673.27	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=5.627;DP=525;FS=0.000;HRun=0;HaplotypeScore=254.9235;InbreedingCoeff=0.8245;MQ=56.75;MQ0=2;MQRankSum=-7.100;QD=90.44;ReadPosRankSum=5.969;VQSLOD=4.1472;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,35:35:39.13:1909,39,0	1/1:0,8:8:9.03:389,9,0	0/0:10,0:8:21.04:0,21,750	0/0:10,0:9:27.06:0,27,976	1/1:0,24:24:51.09:2201,51,0	1/1:0,28:28:34.03:1888,34,0	1/1:0,7:7:9.03:447,9,0	1/1:1,17:18:45.12:1213,45,0	1/1:0,22:22:45.15:2365,45,0	1/1:1,21:22:51.15:2061,51,0	1/1:0,10:10:21.07:1091,21,0	1/1:2,19:21:60.21:3059,60,0	1/1:6,7:13:33.11:1394,33,0	1/1:1,21:22:42.14:2207,42,0	1/1:2,22:24:39.13:1966,39,0	1/1:0,25:25:45.15:2365,45,0	1/1:0,18:18:18.06:897,18,0	1/1:0,14:14:12.04:594,12,0	1/1:2,20:21:60.20:2115,60,0	1/1:4,14:18:51.15:2314,51,0	1/1:0,8:8:3.01:131,3,0	1/1:5,14:19:57.18:2491,57,0	1/1:0,33:33:59.61:3091,60,0	1/1:1,10:11:9.03:395,9,0	1/1:0,19:19:36.12:1813,36,0	1/1:1,16:17:42.14:1919,42,0	1/1:0,35:35:74.50:3941,74,0	1/1:0,12:12:27.09:1419,27,0
chr10	6734257	.	T	TATA	4009.35	PASS	AB=0.968;AC=24;AF=0.429;AN=56;BaseQRankSum=-10.117;DP=516;FS=0.925;HRun=0;HaplotypeScore=284.4046;InbreedingCoeff=-0.3507;MQ=56.70;MQ0=2;MQRankSum=0.306;QD=10.18;ReadPosRankSum=-10.303;VQSLOD=0.5395;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:35,0:35:19.91:265,0,20	0/1:8,0:8:15.60:65,0,16	0/0:10,0:8:21.04:0,21,312	0/0:11,0:10:22.28:0,22,359	0/1:24,0:24:65.60:139,0,66	0/0:28,0:28:22.31:0,22,122	0/0:7,0:7:5.49:0,5,24	1/1:17,0:17:30.73:553,31,0	0/1:22,0:22:11.85:12,0,115	0/1:21,0:21:70.36:294,0,70	0/1:10,0:10:17.29:17,0,44	0/1:20,0:21:99:186,0,125	0/1:7,3:11:41.55:267,0,42	0/1:21,0:21:39.70:40,0,94	0/1:22,0:23:60.99:114,0,61	0/1:25,0:25:60.95:61,0,92	0/1:18,0:18:19.76:98,0,20	0/1:14,0:14:4.70:70,0,5	0/1:21,0:20:53.31:569,0,53	0/1:16,1:17:87.56:161,0,88	1/1:8,0:8:1.55:4,2,0	0/1:15,4:19:57.04:418,0,57	0/1:33,0:33:78.35:400,0,78	1/1:10,0:10:6.01:108,6,0	0/0:19,0:19:13.22:0,13,85	0/1:16,0:16:80.51:171,0,81	0/0:35,0:35:32.79:0,33,230	0/0:12,0:12:24.70:0,25,108
chr10	6735802	.	TG	T	4029.69	PASS	AC=24;AF=0.545;AN=44;BaseQRankSum=6.605;DP=407;FS=0.465;HRun=8;HaplotypeScore=61.6082;InbreedingCoeff=0.9156;MQ=64.14;MQ0=6;MQRankSum=-0.293;QD=22.26;ReadPosRankSum=3.253;VQSLOD=3.9878;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:69.19:0,69,812	./.	0/0:28,0:20:21.92:0,22,395	0/0:24,0:16:12.94:0,13,303	./.	1/1:0,16:16:39.06:377,39,0	1/1:1,13:14:36.06:348,36,0	./.	1/1:1,11:11:30.05:290,30,0	./.	./.	0/0:20,0:20:45.14:0,45,543	0/0:9,0:9:27.08:0,27,326	0/0:13,0:13:33.02:0,33,366	./.	1/1:0,18:18:54.09:521,54,0	1/1:1,20:21:57.09:550,57,0	0/0:7,0:7:0:0,0,0	1/1:2,4:6:8.04:64,8,0	1/1:8,10:17:27.03:260,27,0	0/0:8,0:8:0:0,0,0	1/1:1,8:9:15.02:145,15,0	0/0:22,0:21:57.11:0,57,641	0/0:23,0:23:51.16:0,51,616	1/1:4,16:20:44.14:433,44,0	1/1:3,18:21:51.08:493,51,0	1/1:5,12:17:33.05:318,33,0	1/1:0,8:8:24.04:232,24,0
chr10	6735881	.	GAAAAAAAAAAAAAGACCCAAAAAAAAAA	G	952.07	PASS	AB=0.950;AC=8;AF=0.222;AN=36;BaseQRankSum=2.918;DP=223;FS=0.000;HRun=0;HaplotypeScore=254.9509;InbreedingCoeff=0.5124;MQ=34.03;MQ0=5;MQRankSum=0.068;QD=19.43;ReadPosRankSum=2.905;VQSLOD=1.5680;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:24:35.44:0,35,2560	./.	./.	./.	./.	0/0:10,0:10:13.27:0,13,151	0/0:10,0:7:8.96:0,9,97	./.	0/0:5,0:5:6:0,6,66	./.	./.	1/1:7,5:11:6.02:413,6,0	0/1:7,0:7:0:0,0,0	1/1:6,1:8:6.02:399,6,0	./.	0/1:8,0:9:44.52:45,0,57	0/0:13,0:12:11.92:0,12,171	./.	0/0:6,0:5:8.23:0,8,87	0/0:10,0:10:5.99:0,6,134	./.	0/0:10,0:10:17.01:0,17,166	0/0:11,0:11:4.29:0,4,14	1/1:10,3:13:3.01:206,3,0	0/0:8,0:8:14.18:0,14,215	0/0:23,0:23:41.96:0,42,2302	0/0:17,0:18:39.13:0,39,3666	0/0:19,0:22:54.18:0,54,3048
chr10	6735894	.	AGACCC	A	2590.11	PASS	AB=0.959;AC=28;AF=0.824;AN=34;BaseQRankSum=2.164;DP=157;FS=4.495;HRun=0;HaplotypeScore=72.8818;InbreedingCoeff=0.1574;MQ=30.33;MQ0=1;MQRankSum=0.939;QD=20.08;ReadPosRankSum=-0.230;VQSLOD=2.9782;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:23,3:27:37.86:322,0,38	./.	./.	./.	./.	1/1:0,6:6:15.05:318,15,0	1/1:1,3:3:9.03:190,9,0	./.	1/1:0,2:2:6.02:127,6,0	./.	./.	1/1:6,0:6:6.02:86,6,0	./.	1/1:2,0:2:6.02:85,6,0	./.	1/1:1,2:3:9.03:172,9,0	1/1:0,4:4:12.04:254,12,0	./.	1/1:0,3:3:9.03:192,9,0	1/1:0,5:5:6.02:103,6,0	./.	1/1:0,7:7:18.06:381,18,0	0/1:1,0:1:0:0,0,0	1/1:4,0:4:3.01:43,3,0	1/1:1,5:6:16.30:297,16,0	0/1:26,1:27:45.94:46,0,497	0/1:21,0:20:87.66:88,0,340	0/0:25,0:25:16.41:0,16,362
chr10	6735896	.	ACCC	A	1778.05	PASS	AB=0.901;AC=27;AF=0.794;AN=34;BaseQRankSum=3.721;DP=158;FS=0.690;HRun=3;HaplotypeScore=67.8877;InbreedingCoeff=0.2037;MQ=30.73;MQ0=3;MQRankSum=0.716;QD=14.00;ReadPosRankSum=-0.890;VQSLOD=-0.0093;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:26,1:27:70.84:224,0,71	./.	0/0:4,0:1:2.97:0,3,20	./.	./.	1/1:6,0:6:15.05:218,15,0	1/1:4,0:3:9.03:131,9,0	./.	1/1:3,0:2:6.02:87,6,0	./.	./.	1/1:5,0:5:5.95:43,6,0	./.	1/1:2,0:2:5.96:43,6,0	./.	1/1:4,0:4:9.47:109,9,0	1/1:4,0:4:12.04:173,12,0	./.	1/1:3,0:3:9.03:129,9,0	1/1:5,0:5:6.02:75,6,0	./.	1/1:7,0:7:18.06:261,18,0	./.	1/1:3,0:3:2.98:21,3,0	1/1:7,0:7:15.52:208,16,0	0/1:22,3:25:99:99,0,327	0/1:18,4:21:77.88:78,0,227	0/0:23,1:25:14.30:0,14,330
chr10	6736207	.	GTAGATATTCACAA	G	2632.59	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.730;DP=598;FS=14.680;HRun=0;HaplotypeScore=213.7204;InbreedingCoeff=0.9834;MQ=81.41;MQ0=0;MQRankSum=-7.871;QD=90.78;ReadPosRankSum=-1.641;VQSLOD=1.6223;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,29:28:72.25:2727,72,0	0/0:5,0:5:15.05:0,15,997	0/0:21,0:21:63.21:0,63,3277	0/0:19,0:19:54.15:0,54,2453	0/0:19,0:19:57.20:0,57,3790	0/0:24,0:24:72.23:0,72,4588	0/0:18,0:18:54.17:0,54,3374	0/0:25,0:25:75.26:0,75,4786	0/0:26,0:26:78.27:0,78,5196	0/0:30,0:30:90.31:0,90,5634	0/0:14,0:14:42.14:0,42,2710	0/0:27,0:27:81.28:0,81,5143	0/0:29,0:29:84.29:0,84,5375	0/0:26,0:25:75.24:0,75,4680	0/0:23,0:23:69.24:0,69,4540	0/0:19,0:19:57.20:0,57,3538	0/0:29,0:29:87.30:0,87,5745	0/0:17,0:17:51.18:0,51,3423	0/0:20,0:20:57.20:0,57,3542	0/0:9,0:9:27.09:0,27,1832	0/0:26,0:26:78.27:0,78,5019	0/0:29,0:29:75.26:0,75,4768	0/0:15,0:15:45.15:0,45,2803	0/0:24,0:24:72.25:0,72,4767	0/0:21,0:21:60.21:0,60,3774	0/0:20,0:20:60.21:0,60,3910	0/0:14,0:14:42.14:0,42,2625	0/0:20,0:20:51.18:0,51,3453
chr10	6736375	.	A	AAC	4039.06	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-8.621;DP=734;FS=1.958;HRun=0;HaplotypeScore=123.5684;InbreedingCoeff=0.9809;MQ=63.08;MQ0=7;MQRankSum=0.674;QD=25.09;ReadPosRankSum=1.412;VQSLOD=4.2279;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:71.87:0,72,814	0/0:9,0:9:21.07:0,21,257	0/0:40,0:25:43.27:0,43,466	0/0:37,0:28:34.32:0,34,416	0/0:23,0:23:66.21:0,66,808	0/0:20,0:20:39.10:0,39,454	0/0:46,0:47:99:0,114,1315	0/0:32,0:32:51.08:0,51,573	0/0:16,0:16:45.10:0,45,534	0/0:25,0:25:60.16:0,60,693	0/0:25,0:25:59.78:0,60,678	1/1:9,16:25:42.10:680,42,0	1/1:4,19:23:54.18:875,54,0	1/1:9,16:26:31.11:576,31,0	0/0:15,0:15:24.07:0,24,294	0/0:17,0:17:36.05:0,36,422	0/0:24,0:25:56.98:0,57,649	0/0:32,0:32:53.14:0,53,809	0/0:32,0:32:63.13:0,63,714	0/0:21,0:21:24.07:0,24,294	0/0:41,0:41:66.62:0,67,771	1/1:9,15:24:8.38:644,8,0	1/1:5,12:17:24.07:366,24,0	1/1:9,35:44:37.37:898,37,0	0/0:17,0:16:30.07:0,30,354	0/0:22,0:22:59.84:0,60,691	0/0:15,0:16:38.95:0,39,455	0/0:6,0:6:15.05:0,15,182
chr10	6736424	.	G	GCA	4019.26	PASS	AB=0.748;AC=44;AF=0.815;AN=54;BaseQRankSum=0.936;DP=772;FS=0.855;HRun=0;HaplotypeScore=142.4831;InbreedingCoeff=-0.1174;MQ=53.88;MQ0=24;MQRankSum=-0.457;QD=6.14;ReadPosRankSum=-1.431;VQSLOD=2.7092;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:52,0:52:26.26:176,26,0	1/1:6,0:6:2.96:19,3,0	0/0:49,0:18:1.82:0,2,5	./.	1/1:14,0:14:7.21:48,7,0	0/1:8,10:18:41.79:246,0,42	0/1:29,5:35:49.97:281,0,50	1/1:34,0:33:16.67:94,17,0	0/1:13,9:25:95.65:282,0,96	1/1:33,0:33:19:166,19,0	1/1:13,0:13:9.01:95,9,0	1/1:30,0:35:28.14:224,28,0	1/1:26,0:27:13.63:72,14,0	1/1:28,0:26:22.97:189,23,0	1/1:10,0:14:2.74:12,3,0	0/1:12,14:27:2.83:375,0,3	0/1:16,16:33:65.49:455,0,65	1/1:19,0:19:4.35:59,4,0	0/1:16,1:18:30.47:103,0,30	0/1:12,4:16:53.86:78,0,54	1/1:47,0:47:31.88:239,32,0	1/1:20,0:22:17.97:100,18,0	1/1:18,0:18:8.92:69,9,0	1/1:38,1:41:25.27:214,25,0	0/1:13,8:19:6.40:249,0,6	1/1:15,2:24:13.58:107,14,0	1/1:9,1:19:2.68:11,3,0	1/1:5,0:11:6.01:57,6,0
chr10	6736909	.	GGT	G	127.14	PASS	AB=0.869;AC=16;AF=0.381;AN=42;BaseQRankSum=5.001;DP=516;FS=2.519;HRun=0;HaplotypeScore=68.3731;InbreedingCoeff=0.4324;MQ=69.75;MQ0=20;MQRankSum=-3.528;QD=0.66;ReadPosRankSum=2.163;VQSLOD=1.1091;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:24,7:31:3.01:32,3,0	./.	./.	./.	1/1:15,0:17:2.84:14,3,0	0/0:22,0:22:17.97:0,18,172	0/0:19,0:19:2.99:0,3,24	./.	0/0:14,0:14:0:0,0,0	./.	./.	0/0:11,0:14:6:0,6,51	0/0:13,0:12:11.98:0,12,127	0/0:14,0:14:2.94:0,3,18	1/1:19,0:25:11.01:56,11,0	0/0:10,0:9:8.95:0,9,85	0/1:32,1:34:44.72:45,0,175	1/1:15,0:14:5.74:30,6,0	0/0:16,0:15:1.25:0,1,3	0/0:11,0:11:6:0,6,68	./.	0/0:23,0:23:15.02:0,15,158	0/0:16,0:15:9:0,9,94	0/0:12,0:18:17.99:0,18,153	0/1:17,6:23:19.80:20,0,113	1/1:20,0:21:5.68:28,6,0	1/1:10,0:12:5.68:28,6,0	1/1:9,0:10:2.84:14,3,0
chr10	6738230	.	AAAG	A	11562.40	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=15.442;DP=673;FS=8.080;HRun=0;HaplotypeScore=98.3676;InbreedingCoeff=0.9988;MQ=88.42;MQ0=0;MQRankSum=-5.649;QD=40.86;ReadPosRankSum=2.681;VQSLOD=6.2903;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,31:33:63.03:1048,63,0	1/1:0,12:12:30.10:499,30,0	0/0:25,0:25:66.15:0,66,1243	0/0:26,0:26:72.18:0,72,1305	1/1:2,24:24:57.19:949,57,0	0/0:26,0:26:75.26:0,75,1700	0/0:23,0:23:69.19:0,69,1434	1/1:2,27:29:81.19:1232,81,0	0/0:24,0:24:69.24:0,69,1547	1/1:5,24:28:69.24:1149,69,0	1/1:1,13:12:33.07:519,33,0	0/0:25,0:25:66.23:0,66,1496	0/0:23,0:23:60.18:0,60,1272	0/0:17,0:17:45.15:0,45,1020	1/1:1,23:24:66.23:1099,66,0	0/0:26,0:26:78.27:0,78,1741	0/0:24,0:24:72.23:0,72,1577	1/1:2,23:25:57.19:949,57,0	0/0:16,0:16:42.13:0,42,898	0/0:23,0:22:60.21:0,60,1359	1/1:0,8:8:18.06:300,18,0	0/0:24,0:24:66.21:0,66,1449	0/0:41,0:41:99:0,117,2588	0/0:17,0:17:51.17:0,51,1123	0/0:30,0:30:87.30:0,87,1972	1/1:1,28:29:84.25:1370,84,0	1/1:0,30:30:77.99:1298,78,0	1/1:0,24:24:69.24:1149,69,0
chr10	6738462	.	GGGAGCACTCTCAGGTAAT	G	592.43	PASS	AB=1.000;AC=14;AF=0.269;AN=52;BaseQRankSum=6.081;DP=564;FS=4.235;HRun=0;HaplotypeScore=245.9436;InbreedingCoeff=0.6129;MQ=54.16;MQ0=30;MQRankSum=-2.138;QD=4.98;ReadPosRankSum=2.199;VQSLOD=2.4626;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:10:8.68:53,9,0	0/1:6,0:5:3.08:61,0,3	0/0:24,0:8:17.98:0,18,460	0/0:23,0:10:9.42:0,9,708	./.	0/0:26,0:26:54:0,54,1103	0/0:30,0:30:74.78:0,75,1264	0/0:18,0:6:1.66:0,2,16	0/0:30,0:30:87.16:0,87,1797	1/1:5,10:12:20.45:219,20,0	./.	0/0:28,0:28:68.87:0,69,1368	0/0:22,0:22:51.31:0,51,1004	0/0:28,0:27:68.63:0,69,1279	1/1:18,0:17:11.32:93,11,0	0/0:29,0:28:68.94:0,69,1472	0/0:26,0:26:60.15:0,60,1262	0/1:8,0:6:8.99:9,0,27	0/0:28,0:17:38.76:0,39,638	0/0:25,0:25:42.13:0,42,820	0/1:30,0:24:10.03:27,0,10	0/0:26,0:25:34.24:0,34,1084	0/0:14,0:13:26.09:0,26,650	0/0:35,0:34:90.17:0,90,1897	0/0:19,0:19:48.11:0,48,1059	1/1:8,8:16:17.11:147,17,0	1/1:7,0:7:8.86:81,9,0	0/1:5,0:4:5.30:73,0,5
chr10	6740572	.	A	AT	6497.61	PASS	AB=0.754;AC=28;AF=0.500;AN=56;BaseQRankSum=0.779;DP=494;FS=0.786;HRun=9;HaplotypeScore=67.9699;InbreedingCoeff=0.8202;MQ=80.26;MQ0=2;MQRankSum=-0.978;QD=22.41;ReadPosRankSum=1.912;VQSLOD=5.7207;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:68.78:0,69,597	0/0:5,0:5:11.95:0,12,94	0/0:25,0:16:16.36:0,16,126	0/1:28,0:23:20.69:21,0,93	0/0:23,0:23:62.98:0,63,547	1/1:0,19:20:54.15:596,54,0	1/1:3,12:15:36.10:398,36,0	0/0:18,0:18:35.97:0,36,309	1/1:1,14:15:39.11:431,39,0	0/0:12,0:12:29.97:0,30,257	0/0:20,0:20:47.93:0,48,405	0/1:1,6:7:8.01:148,0,8	1/1:6,13:19:39.09:427,39,0	1/1:1,17:18:48.13:529,48,0	0/0:9,0:9:20.99:0,21,182	1/1:1,9:10:1.03:239,1,0	1/1:7,25:32:69.19:763,69,0	0/0:10,0:10:26.99:0,27,234	1/1:8,11:19:10.04:339,10,0	1/1:9,17:26:25.08:503,25,0	0/0:5,0:5:15:0,15,130	1/1:2,15:17:42.11:465,42,0	1/1:4,18:22:28.09:536,28,0	1/1:0,17:17:48.13:529,48,0	1/1:2,20:22:31.10:571,31,0	0/0:16,0:16:32.96:0,33,282	0/0:22,0:22:38.53:0,39,496	0/0:12,0:12:35.98:0,36,308
chr10	6740826	.	GACACACAC	G	2250.82	PASS	AC=26;AF=0.481;AN=54;BaseQRankSum=4.383;DP=535;FS=8.912;HRun=0;HaplotypeScore=143.5999;InbreedingCoeff=0.7590;MQ=48.27;MQ0=20;MQRankSum=-8.443;QD=10.62;ReadPosRankSum=4.611;VQSLOD=1.4140;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:21.04:0,21,606	0/0:6,0:6:12.04:0,12,371	./.	0/0:43,0:9:7.27:0,7,92	0/0:15,0:16:36.10:0,36,1065	1/1:4,9:13:9.03:228,9,0	1/1:15,12:26:9.03:228,9,0	0/0:18,0:20:28.63:0,29,586	1/1:5,7:12:12.04:304,12,0	0/0:16,0:17:47.82:0,48,1280	0/0:5,0:6:17.39:0,17,386	1/1:5,7:14:11.93:202,12,0	1/1:4,10:14:11.63:238,12,0	1/1:4,5:10:3.01:76,3,0	0/0:13,0:13:21.07:0,21,703	1/1:4,4:8:9.03:228,9,0	1/1:16,14:31:23.99:476,24,0	0/0:17,0:18:32.32:0,32,979	1/1:12,2:13:4.45:149,4,0	0/0:11,10:21:2.37:0,2,8	0/0:39,0:41:72.25:0,72,2139	1/1:5,7:11:3.01:76,3,0	1/1:9,6:15:2.82:73,3,0	1/1:14,12:27:3.48:57,3,0	1/1:4,10:15:5.80:111,6,0	0/0:10,0:22:42.14:0,42,1487	0/0:13,0:17:30.05:0,30,1106	0/0:0,0:4:3.01:0,3,105
chr10	6740853	.	A	ATAGG	233.83	PASS	AB=0.969;AC=6;AF=0.107;AN=56;BaseQRankSum=3.405;DP=528;FS=12.161;HRun=0;HaplotypeScore=126.2265;InbreedingCoeff=0.0692;MQ=53.06;MQ0=14;MQRankSum=-3.654;QD=2.27;ReadPosRankSum=-1.063;VQSLOD=1.5284;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:33:29.58:0,30,504	0/0:5,0:5:12.04:0,12,248	0/1:38,3:14:99:184,0,455	0/1:31,2:15:99:119,0,568	0/0:19,0:19:51.17:0,51,1005	0/0:13,0:13:17.84:0,18,236	0/0:25,0:24:15.76:0,16,515	0/0:21,0:20:50.50:0,50,832	0/0:12,0:12:21.06:0,21,309	0/0:23,0:23:69.24:0,69,1379	0/0:12,0:12:36.12:0,36,664	0/0:14,0:14:20.43:0,20,278	0/0:12,0:12:18.04:0,18,238	0/0:9,0:9:8.06:0,8,100	0/0:11,0:11:27.08:0,27,525	0/0:11,0:10:18.01:0,18,244	0/0:26,0:26:47.85:0,48,629	0/0:14,0:14:42.12:0,42,802	0/0:18,0:18:37.89:0,38,815	0/0:21,0:21:7.13:0,7,438	0/0:46,0:45:99:0,111,2144	0/0:12,0:11:12.04:0,12,218	0/1:10,0:10:13.60:30,0,14	0/0:25,0:25:11.74:0,12,216	0/1:15,0:15:1.86:2,0,260	0/0:25,0:24:63.12:0,63,912	0/0:16,0:16:39.13:0,39,723	1/1:4,0:4:0.47:1,0,0
chr10	6742311	.	G	GTGGA	4417.30	PASS	AB=0.611;AC=31;AF=0.620;AN=50;BaseQRankSum=-5.190;DP=771;FS=2.411;HRun=0;HaplotypeScore=111.5617;InbreedingCoeff=0.7940;MQ=59.89;MQ0=16;MQRankSum=1.782;QD=10.09;ReadPosRankSum=-2.031;VQSLOD=4.1345;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:45:82.06:0,82,1142	0/0:12,0:12:21.05:0,21,288	./.	./.	0/0:27,0:25:41.82:0,42,554	1/1:10,16:25:24.08:566,24,0	1/1:22,15:38:6:51,6,0	0/0:24,0:24:14.98:0,15,169	1/1:17,18:37:21.07:496,21,0	0/0:32,0:32:36.55:0,37,574	0/0:12,0:12:12.04:0,12,175	1/1:6,6:32:3.01:50,3,0	1/1:13,1:34:11.07:161,11,0	1/1:16,4:42:9.02:130,9,0	0/0:31,0:31:54.05:0,54,703	0/1:8,14:21:38.37:133,0,38	1/1:8,24:31:12.04:284,12,0	0/0:25,0:25:37.05:0,37,530	1/1:13,9:22:29.99:496,30,0	1/1:8,10:19:20.95:289,21,0	0/0:50,0:50:90.20:0,90,1223	1/1:8,13:22:9.03:213,9,0	1/1:7,1:21:2.04:6,2,0	./.	1/1:13,12:25:12.04:284,12,0	1/1:13,15:27:38.89:626,39,0	1/1:5,14:19:10.24:174,10,0	1/1:14,5:19:20.53:460,21,0
chr10	6743808	.	C	CT	255.50	PASS	AB=0.925;AC=10;AF=0.227;AN=44;BaseQRankSum=5.192;DP=597;FS=9.204;HRun=0;HaplotypeScore=82.7767;InbreedingCoeff=0.1029;MQ=27.54;MQ0=200;MQRankSum=-3.606;QD=1.39;ReadPosRankSum=-0.498;VQSLOD=1.0466;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:15:6.02:0,6,84	0/1:7,0:6:6.05:6,0,12	./.	./.	./.	0/1:15,5:14:71.33:83,0,71	0/0:17,3:8:2.94:0,3,18	./.	0/1:30,1:22:12.16:12,0,390	0/0:11,0:5:6:0,6,53	./.	0/0:30,0:24:18.01:0,18,252	0/1:36,2:30:51.58:52,0,473	0/0:35,0:23:33.05:0,33,432	0/1:15,0:6:6.19:6,0,12	0/0:22,0:15:20.56:0,21,252	1/1:29,7:19:10.11:146,10,0	1/1:12,0:7:4.50:14,4,0	0/0:23,0:6:18.06:0,18,249	0/0:19,0:18:15.55:0,16,201	0/0:46,0:13:3.01:0,3,42	0/0:17,1:17:11.04:0,11,281	0/0:9,0:7:6.02:0,6,84	./.	0/1:20,5:21:64.47:64,0,254	0/0:29,0:20:51.10:0,51,639	0/0:18,0:14:14.70:0,15,208	0/0:13,0:10:17.99:0,18,209
chr10	6744991	.	G	GTA	4321.79	PASS	AB=1.000;AC=29;AF=0.537;AN=54;BaseQRankSum=-11.750;DP=343;FS=0.000;HRun=0;HaplotypeScore=39.7147;InbreedingCoeff=0.7938;MQ=63.90;MQ0=0;MQRankSum=2.142;QD=32.25;ReadPosRankSum=3.153;VQSLOD=6.4964;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:32:65.33:0,65,323	0/0:10,0:10:30.03:0,30,325	0/1:6,0:6:23.57:33,0,24	./.	0/0:27,0:27:75.21:0,75,926	1/1:4,19:22:3.73:613,4,0	1/1:0,2:2:6.02:100,6,0	0/0:36,0:36:84.24:0,84,1027	1/1:1,10:11:24.08:401,24,0	0/0:13,0:13:36.12:0,36,458	0/0:8,0:8:21.05:0,21,252	1/1:0,5:5:12.04:201,12,0	1/1:2,4:6:12.04:201,12,0	1/1:1,3:4:9.03:150,9,0	0/0:13,0:13:36.12:0,36,458	1/1:1,2:3:3.01:50,3,0	1/1:2,15:17:36.12:601,36,0	0/0:22,0:22:66.21:0,66,838	1/1:5,9:15:30.10:473,30,0	1/1:0,12:12:30.10:501,30,0	0/0:11,0:11:33.08:0,33,403	1/1:1,0:1:3.01:47,3,0	1/1:1,7:9:18.06:297,18,0	1/1:0,2:2:3.01:50,3,0	1/1:2,16:18:36.12:602,36,0	0/0:15,0:15:36.11:0,36,446	0/0:12,0:12:36.12:0,36,456	0/0:7,0:7:15.05:0,15,188
chr10	6746121	.	TAGAACAGAACAGAAC	T	7050.05	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=8.639;DP=715;FS=1.732;HRun=0;HaplotypeScore=287.9586;InbreedingCoeff=0.9714;MQ=61.10;MQ0=4;MQRankSum=-8.164;QD=39.61;ReadPosRankSum=0.098;VQSLOD=3.5518;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:28:39.13:0,39,1218	0/0:6,0:12:27.09:0,27,1365	0/0:29,0:18:14.83:0,15,374	0/0:59,0:31:16.58:0,17,556	0/0:27,0:39:74.25:0,74,3193	1/1:6,14:20:24.08:1000,24,0	1/1:16,8:24:6.02:239,6,0	0/0:37,0:37:63.20:0,63,2841	1/1:11,13:24:27.09:1115,27,0	0/0:16,0:23:57.19:0,57,2897	0/0:8,0:17:36.12:0,36,1876	0/0:24,0:24:54.17:0,54,3504	0/0:16,0:16:36.12:0,36,2398	0/0:22,0:22:39.12:0,39,2246	0/0:15,0:28:57.18:0,57,2543	1/1:3,11:14:24.08:1000,24,0	1/1:15,12:27:15.05:625,15,0	0/0:18,0:22:24.06:0,24,1093	1/1:13,7:20:21.02:573,21,0	1/1:11,17:28:45.15:1759,45,0	0/0:16,0:16:33.11:0,33,1230	0/0:30,0:30:51.14:0,51,2804	0/0:27,0:27:51.15:0,51,2884	0/0:28,0:28:66.23:0,66,3845	1/1:11,10:21:18.06:740,18,0	0/0:20,0:20:42.14:0,42,2495	0/0:32,0:30:60.21:0,60,3719	0/0:26,0:26:69.24:0,69,4393
chr10	6747229	.	TAC	T	4287.09	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=6.456;DP=1251;FS=52.464;HRun=0;HaplotypeScore=345.7155;InbreedingCoeff=0.9994;MQ=48.25;MQ0=21;MQRankSum=2.229;QD=17.72;ReadPosRankSum=-3.466;VQSLOD=3.2288;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:37:41.13:0,41,990	0/0:28,0:28:35.38:0,35,605	0/0:34,0:17:32.64:0,33,480	0/0:37,0:12:30.06:0,30,417	0/0:47,0:47:35.54:0,36,685	0/0:28,0:28:47.69:0,48,815	0/0:41,0:41:87.23:0,87,1462	0/0:72,0:71:99:0,164,2977	0/0:55,0:55:97:0,97,1683	0/0:96,0:94:99:0,230,4051	0/0:34,0:34:36.97:0,37,681	1/1:5,47:51:69.07:949,69,0	1/1:9,45:53:84.64:1103,85,0	1/1:9,30:39:63.51:813,64,0	0/0:61,0:61:57.41:0,57,1178	0/0:48,0:48:70.77:0,71,1254	0/0:31,0:31:74.83:0,75,1236	0/0:41,0:41:93.32:0,93,1627	0/0:11,0:10:27.09:0,27,471	0/0:49,0:49:99:0,126,2222	0/0:81,0:81:99:0,214,3664	1/1:9,33:41:30.03:380,30,0	1/1:5,27:32:45.13:600,45,0	1/1:7,16:20:35.46:443,35,0	0/0:40,0:40:99:0,110,1914	0/0:76,0:75:99:0,220,3744	0/0:40,0:40:87.30:0,87,1506	0/0:21,0:21:51.11:0,51,799
chr10	6747235	.	CAT	C	1323.35	PASS	AB=1.000;AC=10;AF=0.179;AN=56;BaseQRankSum=11.759;DP=1301;FS=41.467;HRun=0;HaplotypeScore=391.7979;InbreedingCoeff=0.7094;MQ=47.31;MQ0=26;MQRankSum=-3.810;QD=5.36;ReadPosRankSum=-4.896;VQSLOD=1.3829;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:34:59.96:0,60,1052	0/0:26,2:28:31.80:0,32,633	0/0:40,0:16:25.48:0,25,467	0/0:42,0:11:28.51:0,29,376	0/0:48,3:51:33.38:0,33,742	0/0:29,0:29:50.70:0,51,941	0/0:40,0:40:89.45:0,89,1610	0/0:75,1:73:69.84:0,70,3082	0/0:53,0:52:92.53:0,93,1785	0/0:101,1:100:99:0,209,4567	0/0:32,2:34:39.45:0,39,779	1/1:48,0:47:67.21:381,67,0	1/1:54,0:53:1.70:349,2,0	1/1:40,1:41:32.88:278,33,0	0/0:63,0:63:58.25:0,58,1306	0/0:53,0:53:77.52:0,78,1459	0/0:31,0:31:75.22:0,75,1356	0/0:41,0:41:96.27:0,96,1786	0/0:16,0:14:36.10:0,36,594	0/0:48,0:48:99:0,135,2497	0/0:85,0:85:99:0,223,4057	0/1:46,0:45:63.51:96,0,64	1/1:31,1:32:40.74:240,41,0	0/1:26,0:23:10.49:140,0,10	0/0:43,0:43:99:0,119,2143	0/0:80,0:79:99:0,232,4170	0/0:40,0:40:87.06:0,87,1600	0/0:24,0:24:60:0,60,1008
chr10	6747289	.	T	TAC	24534.10	PASS	AB=0.648;AC=50;AF=0.893;AN=56;BaseQRankSum=1.814;DP=1148;FS=3.335;HRun=0;HaplotypeScore=412.5312;InbreedingCoeff=0.5976;MQ=45.80;MQ0=11;MQRankSum=5.197;QD=22.70;ReadPosRankSum=5.809;VQSLOD=4.3553;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,13:20:29.77:471,30,0	1/1:7,12:19:6:104,6,0	0/0:34,0:21:53.23:0,53,614	0/0:32,0:18:26.18:0,26,288	1/1:10,39:49:27.07:466,27,0	1/1:3,24:27:30.09:492,30,0	0/1:16,26:42:52.18:874,0,52	1/1:27,2:23:29.76:319,30,0	1/1:9,38:47:45.15:767,45,0	1/1:9,81:89:99:3603,179,0	1/1:10,23:33:26.86:442,27,0	1/1:9,36:45:23.57:363,24,0	1/1:11,38:51:69.22:1159,69,0	1/1:5,43:49:54.12:903,54,0	1/1:3,60:63:60.19:1026,60,0	1/1:14,39:53:72.15:1083,72,0	1/1:9,13:22:37.29:546,37,0	1/1:3,30:32:48.16:831,48,0	0/1:10,9:16:72.08:428,0,72	1/1:6,38:43:80.64:1342,81,0	1/1:10,75:84:99:2337,135,0	1/1:10,36:45:54.15:924,54,0	1/1:7,31:38:26.92:469,27,0	1/1:7,19:24:20.81:325,21,0	1/1:9,28:37:66.15:1005,66,0	1/1:19,40:58:99:2476,150,0	1/1:7,23:30:61.42:982,61,0	1/1:3,21:23:48.16:799,48,0
chr10	6747293	.	C	CAT	12350.50	PASS	AB=0.995;AC=45;AF=0.804;AN=56;BaseQRankSum=2.646;DP=1130;FS=5.941;HRun=0;HaplotypeScore=452.1742;InbreedingCoeff=0.1734;MQ=46.01;MQ0=12;MQRankSum=4.163;QD=11.53;ReadPosRankSum=12.502;VQSLOD=3.3048;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:21:9.70:231,10,0	1/1:16,0:16:5.99:54,6,0	0/0:31,0:19:54.16:0,54,765	0/0:28,0:14:26.33:0,26,376	0/1:49,1:50:15.91:214,0,16	1/1:27,0:27:27.01:250,27,0	0/1:41,0:41:99:457,0,141	0/1:27,0:22:64.14:64,0,78	1/1:49,0:49:23.46:418,23,0	1/1:91,1:91:99:2040,147,0	1/1:32,0:32:1.80:193,2,0	0/1:43,0:43:3.44:143,0,3	1/1:51,0:51:30.64:636,31,0	1/1:51,0:51:8.69:424,9,0	1/1:64,0:64:16.98:485,17,0	0/1:52,0:53:9.11:493,0,9	1/1:20,0:20:14.24:256,14,0	1/1:32,0:31:35.30:438,35,0	0/1:18,0:14:99:233,0,133	1/1:47,0:46:49.90:678,50,0	1/1:83,2:83:93.16:1170,93,0	1/1:47,0:46:10.05:429,10,0	0/1:36,0:36:16.07:214,0,16	1/1:22,0:20:16.23:162,16,0	1/1:36,0:36:52.77:458,53,0	1/1:59,0:58:56.64:1259,57,0	1/1:28,0:28:55.46:557,55,0	1/1:24,0:23:10.87:397,11,0
chr10	6747333	.	TAC	T	8788.69	PASS	AB=0.693;AC=22;AF=0.393;AN=56;BaseQRankSum=2.929;DP=1182;FS=37.370;HRun=0;HaplotypeScore=507.0864;InbreedingCoeff=0.8473;MQ=46.59;MQ0=8;MQRankSum=-3.513;QD=23.69;ReadPosRankSum=0.739;VQSLOD=1.8455;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,7:17:18.92:210,19,0	0/0:17,0:17:28.34:0,28,522	0/0:31,0:16:42.07:0,42,692	0/0:32,0:16:42.06:0,42,567	0/0:35,0:35:47.81:0,48,926	1/1:5,23:28:54.03:627,54,0	0/1:15,16:31:80.71:556,0,81	0/0:104,0:92:99:0,238,4422	1/1:8,41:49:99:1287,105,0	0/0:92,0:92:99:0,236,4179	0/0:40,0:40:53.02:0,53,974	0/0:47,0:46:65.09:0,65,1262	0/0:56,0:56:89.65:0,90,1668	0/0:58,0:58:99:0,101,1887	0/0:63,0:63:99:0,102,1857	1/1:11,34:45:88.12:1056,88,0	1/1:4,15:19:30.06:370,30,0	0/0:26,0:24:48.16:0,48,894	0/1:10,6:15:49.70:219,0,50	1/1:8,34:42:32.84:965,33,0	0/0:83,0:81:99:0,126,2323	0/0:49,0:48:65.58:0,66,1263	0/0:54,0:54:71.28:0,71,1378	0/0:24,0:23:27.03:0,27,453	1/1:3,27:30:76.04:923,76,0	1/1:10,34:45:35.86:1285,36,0	1/1:4,28:32:78.53:967,79,0	1/1:8,9:16:16.86:323,17,0
chr10	6747396	.	G	GGTA	10009.53	PASS	AB=0.772;AC=16;AF=0.286;AN=56;BaseQRankSum=0.988;DP=1297;FS=6.017;HRun=0;HaplotypeScore=558.3392;InbreedingCoeff=-0.4250;MQ=33.77;MQ0=20;MQRankSum=-8.783;QD=11.51;ReadPosRankSum=2.033;VQSLOD=3.2677;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,2:21:10.73:0,11,192	0/1:19,22:41:99:111,0,232	0/0:28,0:5:15.05:0,15,270	0/0:32,0:6:11.71:0,12,209	0/0:25,21:46:17.07:0,17,312	0/0:22,11:33:15.99:0,16,299	0/1:16,8:25:78.06:78,0,129	0/1:53,50:74:99:2173,0,693	0/1:43,11:54:55.55:56,0,667	0/1:75,48:122:99:4290,0,1606	0/0:24,21:45:20.06:0,20,382	0/1:33,10:42:43.11:43,0,524	0/1:33,18:50:99:454,0,346	0/1:33,12:45:99:119,0,197	0/1:59,16:75:9.03:9,0,415	0/1:46,21:66:30.35:30,0,715	0/0:16,3:19:22.73:0,23,299	0/1:17,0:17:70.40:70,0,306	0/1:19,4:17:99:202,0,577	0/0:29,13:43:38.11:0,38,661	0/0:36,0:35:34.31:0,34,540	0/1:37,32:68:9.30:9,0,205	0/0:35,29:65:21.75:0,22,429	0/0:13,3:14:6.02:0,6,100	0/0:24,17:41:0.33:0,0,561	0/1:47,18:66:99:1552,0,1627	0/1:38,11:49:99:464,0,854	0/1:7,6:13:99:348,0,240
chr10	6747412	.	GCATACATA	G	5744.82	PASS	AB=0.844;AC=23;AF=0.411;AN=56;BaseQRankSum=6.187;DP=1152;FS=16.699;HRun=0;HaplotypeScore=512.7098;InbreedingCoeff=0.3621;MQ=31.37;MQ0=22;MQRankSum=-5.304;QD=9.08;ReadPosRankSum=-0.422;VQSLOD=0.4987;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:17:5.44:0,5,144	1/1:19,18:37:10.87:119,11,0	0/0:33,0:11:29.82:0,30,572	0/0:34,0:7:9.03:0,9,158	1/1:22,18:40:1.55:4,2,0	0/0:18,0:30:11.33:0,11,147	0/0:21,0:23:5.52:0,6,49	0/1:75,0:53:78.18:441,0,78	0/0:39,0:53:19.79:0,20,181	0/1:72,43:114:99:4381,0,398	0/0:28,15:43:2.76:0,3,30	1/1:20,14:33:4.12:60,4,0	0/1:32,15:46:10.13:541,0,10	1/1:25,14:39:3.87:37,4,0	1/1:41,21:62:1.73:3,2,0	0/0:35,0:58:6.48:0,6,59	1/1:14,0:16:0.91:3,1,0	0/1:6,2:8:33.65:139,0,34	0/0:20,0:16:29.11:0,29,311	0/0:21,0:41:17.56:0,18,318	1/1:23,0:22:2.57:12,3,0	1/1:42,26:67:2.20:3,2,0	1/1:32,23:55:0.64:1,1,0	0/1:13,1:12:0:0,0,0	0/0:18,0:37:16.50:0,16,233	0/0:42,0:65:99:0,162,1433	0/0:27,0:47:62.76:0,63,689	0/0:4,0:12:15.10:0,15,127
chr10	6747414	.	A	ATGG	6844.98	PASS	AB=0.775;AC=28;AF=0.500;AN=56;BaseQRankSum=-0.181;DP=1129;FS=0.866;HRun=0;HaplotypeScore=460.0196;InbreedingCoeff=-0.3459;MQ=31.01;MQ0=22;MQRankSum=-3.332;QD=7.17;ReadPosRankSum=-0.502;VQSLOD=2.3847;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:14,5:17:6.20:145,6,0	0/1:27,10:37:3.83:65,0,4	0/0:32,0:11:33.07:0,33,542	0/0:31,0:6:11.71:0,12,204	0/1:31,8:39:0.51:1,0,1	0/1:18,11:29:60.83:114,0,61	0/1:17,7:24:32.64:33,0,69	0/0:75,0:53:93.31:0,93,1510	0/1:31,24:55:99:300,0,123	0/1:87,27:113:99:1955,0,1812	0/1:30,11:41:14.25:14,0,38	0/1:20,13:32:19.92:64,0,20	0/1:35,11:46:99:481,0,175	0/1:25,13:38:19.02:47,0,19	1/1:33,24:58:3.40:35,3,0	0/1:33,24:57:44.89:192,0,45	1/1:16,1:17:5.96:103,6,0	0/1:6,2:8:99:120,0,129	0/1:16,5:15:99:349,0,232	0/1:29,11:40:66.08:286,0,66	0/0:18,4:21:3.70:0,4,15	1/1:47,21:67:10.24:73,10,0	1/1:40,11:51:3.05:39,3,0	0/0:11,2:11:0:0,0,0	0/1:28,7:36:86.24:129,0,86	0/1:44,23:66:99:1451,0,908	0/1:29,15:43:99:655,0,261	0/1:10,2:12:99:195,0,113
chr10	6747428	.	ACATG	A	2532.58	PASS	AB=0.995;AC=23;AF=0.411;AN=56;BaseQRankSum=1.005;DP=1158;FS=12.561;HRun=0;HaplotypeScore=476.5434;InbreedingCoeff=-0.2992;MQ=31.21;MQ0=18;MQRankSum=-2.129;QD=2.95;ReadPosRankSum=9.960;VQSLOD=-0.4467;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:20:6.12:0,6,95	0/1:42,0:42:5.91:27,0,6	0/0:33,0:10:29.84:0,30,443	0/0:31,0:7:11.06:0,11,163	0/1:43,0:43:0.56:1,0,1	0/1:34,0:34:49.61:50,0,147	1/1:24,0:24:2.59:26,3,0	0/1:58,0:44:80.81:81,0,252	0/1:52,0:52:71.82:72,0,121	0/1:118,3:120:99:814,0,632	0/0:45,0:45:2.42:0,2,12	0/0:35,0:35:1.82:0,2,7	0/1:46,2:47:65.28:95,0,65	1/1:44,1:45:2.37:18,2,0	0/0:58,1:59:0.30:0,0,3	0/1:55,0:55:65.30:65,0,102	0/0:17,0:17:2.68:0,3,18	0/1:11,0:11:49.33:63,0,49	0/1:19,0:13:83.05:98,0,83	0/1:36,0:36:10.38:10,0,135	1/1:25,0:24:1.96:7,2,0	0/1:72,1:72:0.51:1,0,1	0/0:56,1:57:2.13:0,2,18	0/1:14,0:12:0.10:0,0,0	0/1:39,0:39:62.86:63,0,191	0/1:60,0:59:99:812,0,254	0/1:49,0:48:99:259,0,300	0/1:11,0:11:41.58:107,0,42
chr10	6747441	.	CAT	C	899.10	PASS	AB=0.960;AC=17;AF=0.315;AN=54;BaseQRankSum=11.282;DP=1125;FS=52.774;HRun=0;HaplotypeScore=435.4665;InbreedingCoeff=0.3228;MQ=34.57;MQ0=13;MQRankSum=-11.305;QD=1.56;ReadPosRankSum=3.901;VQSLOD=0.3861;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:23:27.05:0,27,390	1/1:40,0:40:0.40:23,0,0	0/0:34,0:10:30.04:0,30,462	0/0:36,1:10:17.27:0,17,282	0/1:45,1:46:0.09:0,0,1	0/0:33,0:33:38.95:0,39,622	0/0:18,0:18:8.82:0,9,155	0/1:35,0:28:8.54:35,0,9	0/0:55,0:55:59.22:0,59,989	0/1:106,4:109:2.82:767,0,3	1/1:41,1:42:1.73:5,2,0	0/1:41,1:42:4.26:4,0,19	0/1:52,2:53:32.18:123,0,32	0/1:43,1:44:0.25:0,0,0	1/1:56,1:57:2.07:9,2,0	0/0:59,0:59:47.45:0,47,769	0/0:17,0:17:5.46:0,5,75	0/1:10,2:12:46.67:47,0,61	0/0:15,0:12:30.01:0,30,414	0/0:40,0:40:44.74:0,45,681	1/1:26,3:29:1.52:6,2,0	1/1:66,1:66:2.67:13,3,0	0/0:54,1:55:0.50:0,0,2	./.	0/0:36,0:36:35.95:0,36,584	0/0:52,0:51:99:0,147,1833	0/0:46,0:45:78.08:0,78,1006	0/0:12,0:12:20.54:0,21,295
chr10	6747449	.	CAT	C	5247.02	PASS	AB=0.614;AC=19;AF=0.352;AN=54;BaseQRankSum=10.118;DP=1073;FS=68.334;HRun=0;HaplotypeScore=404.6938;InbreedingCoeff=0.4782;MQ=35.28;MQ0=9;MQRankSum=-10.541;QD=9.30;ReadPosRankSum=0.489;VQSLOD=2.5704;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:22:24.06:0,24,427	1/1:4,31:35:0.54:51,1,0	0/0:32,0:8:20.92:0,21,263	0/0:34,0:9:14.89:0,15,266	0/1:11,40:51:0.18:0,0,1	0/0:32,0:32:35.96:0,36,694	0/0:21,0:21:8.82:0,9,174	1/1:7,21:23:29:629,29,0	0/0:53,0:53:62.87:0,63,1184	1/1:25,82:107:99:3747,138,0	0/1:6,32:38:11.14:11,0,12	0/1:11,30:41:5.41:98,0,5	0/1:15,34:49:28.98:428,0,29	1/1:16,28:44:5.21:29,5,0	1/1:17,35:52:2.79:45,3,0	0/0:56,0:56:50.37:0,50,923	0/0:17,0:17:8.71:0,9,105	0/1:9,3:12:55.80:120,0,56	0/0:17,0:14:38.83:0,39,563	0/0:38,0:38:41.89:0,42,777	0/0:22,2:23:0.98:0,1,2	1/1:11,47:58:2.89:43,3,0	1/1:10,39:49:2.88:46,3,0	./.	0/0:33,0:33:33.11:0,33,637	0/0:57,0:56:99:0,145,2643	0/0:42,0:41:60.66:0,61,1267	0/0:17,0:17:21.07:0,21,365
chr10	6747472	.	G	GGTA	104	PASS	AB=0.961;AC=10;AF=0.179;AN=56;BaseQRankSum=3.037;DP=982;FS=7.778;HRun=0;HaplotypeScore=379.4944;InbreedingCoeff=0.0311;MQ=40.10;MQ0=7;MQRankSum=-4.172;QD=0.29;ReadPosRankSum=-5.464;VQSLOD=0.3956;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:30:26.97:0,27,464	0/1:27,0:27:0.97:1,0,2	0/0:35,0:3:6.02:0,6,107	0/0:51,0:13:26.97:0,27,423	1/1:47,0:47:1.37:12,1,0	0/0:30,0:30:50.92:0,51,1007	0/0:21,0:21:15.03:0,15,291	0/0:21,0:12:24.08:0,24,414	0/0:45,0:45:80.85:0,81,1519	0/0:73,2:74:78.83:0,79,3172	0/1:32,0:32:13.11:13,0,42	0/1:31,2:33:41.01:41,0,151	0/1:37,6:43:70.92:71,0,435	0/1:39,4:43:12.53:13,0,39	0/1:41,2:43:38.39:63,0,38	0/0:44,0:44:65.71:0,66,1320	0/0:20,0:20:10.97:0,11,142	0/0:7,1:8:7.06:0,7,125	0/0:23,0:20:57.06:0,57,1055	0/0:39,0:39:57.14:0,57,1073	0/0:8,11:18:4.16:0,4,10	0/1:47,0:47:5.21:5,0,38	0/1:47,0:47:13.94:14,0,53	0/0:8,1:9:0:0,0,0	0/0:28,0:28:47.52:0,48,936	0/0:59,0:59:99:0,155,2975	0/0:47,0:46:66.22:0,66,1208	0/0:15,0:15:18.02:0,18,296
chr10	6747483	.	C	CACAT	3084.57	PASS	AB=0.858;AC=21;AF=0.375;AN=56;BaseQRankSum=11.403;DP=950;FS=38.758;HRun=0;HaplotypeScore=366.2923;InbreedingCoeff=0.4771;MQ=40.44;MQ0=8;MQRankSum=-11.992;QD=6.49;ReadPosRankSum=-3.670;VQSLOD=0.8305;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:33:26.68:0,27,457	1/1:15,8:23:2.11:12,2,0	0/0:34,0:6:14.92:0,15,226	0/0:52,0:14:29.08:0,29,398	0/1:25,18:43:1.07:3,0,1	0/0:30,0:30:57.18:0,57,1079	0/0:20,0:20:11.93:0,12,235	0/1:20,0:10:26.49:104,0,26	0/0:47,0:47:80.58:0,81,1559	1/1:48,20:67:99:2446,119,0	0/1:26,9:35:4.36:36,0,4	1/1:30,4:35:13.89:195,14,0	1/1:33,11:44:22.49:166,22,0	1/1:33,7:40:7.28:49,7,0	1/1:32,6:38:3.89:56,4,0	0/0:44,0:44:69.62:0,70,1335	0/1:21,0:21:12.90:13,0,77	0/1:6,1:7:2.50:126,0,2	0/0:21,0:19:51.47:0,51,832	0/0:39,0:39:72.69:0,73,1334	1/1:16,0:16:2.47:11,2,0	0/1:36,8:45:6.12:36,0,6	0/1:29,10:39:5.91:6,0,7	0/0:8,0:8:0:0,0,0	0/0:30,0:30:64.12:0,64,1177	0/0:57,0:57:99:0,136,2598	0/0:44,0:44:61.38:0,61,1027	0/0:14,0:14:12.04:0,12,223
chr10	6747489	.	C	CATGA	2098.33	PASS	AB=0.898;AC=23;AF=0.411;AN=56;BaseQRankSum=8.593;DP=947;FS=16.199;HRun=0;HaplotypeScore=380.2039;InbreedingCoeff=0.5716;MQ=39.63;MQ0=10;MQRankSum=-10.812;QD=4.63;ReadPosRankSum=-6.471;VQSLOD=-0.1034;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:39.06:0,39,597	1/1:16,8:24:7.87:51,8,0	0/0:29,0:5:14.41:0,14,240	0/0:50,0:16:38.66:0,39,593	1/1:26,15:41:3.53:24,4,0	0/0:32,0:32:60.19:0,60,1184	0/0:21,0:21:11.95:0,12,244	0/1:24,0:16:89.82:205,0,90	0/0:50,0:50:87.06:0,87,1667	0/1:55,12:67:99:1403,0,465	1/1:25,8:33:18.04:98,18,0	1/1:29,4:34:8.38:127,8,0	0/1:28,11:40:42.92:49,0,43	1/1:30,7:38:3.56:12,4,0	1/1:28,6:34:4.38:23,4,0	0/0:43,0:43:69.22:0,69,1428	0/0:23,0:23:13.92:0,14,172	0/1:6,1:7:3.36:90,0,3	0/0:22,0:19:54.15:0,54,1033	0/0:38,0:38:75.71:0,76,1474	1/1:17,0:16:3.41:13,3,0	1/1:36,8:44:16.06:93,16,0	1/1:32,10:42:17.83:98,18,0	0/1:8,0:8:0.10:0,0,0	0/0:29,0:29:66.21:0,66,1289	0/0:57,0:57:99:0,156,2963	0/0:49,0:49:72.09:0,72,1137	0/0:12,0:12:12.04:0,12,232
chr10	6747520	.	G	GGTA	221.44	PASS	AB=0.903;AC=5;AF=0.089;AN=56;BaseQRankSum=6.571;DP=794;FS=14.962;HRun=0;HaplotypeScore=315.0820;InbreedingCoeff=0.2535;MQ=41.14;MQ0=14;MQRankSum=-4.446;QD=3.95;ReadPosRankSum=-3.326;VQSLOD=0.8088;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:51.15:0,51,917	0/0:14,0:14:19.78:0,20,228	0/0:30,0:14:33.04:0,33,566	0/0:33,0:19:54.65:0,55,960	0/0:30,0:30:24.34:0,24,289	0/0:31,0:31:51.17:0,51,1006	0/0:15,0:15:11.93:0,12,216	0/0:38,0:29:62.33:0,62,865	0/0:43,0:43:75.21:0,75,1372	0/1:29,0:29:99:259,0,853	0/0:32,0:32:39.10:0,39,489	0/0:20,0:20:30.07:0,30,465	0/0:31,0:31:3.49:0,3,553	0/0:25,0:25:37.22:0,37,580	0/0:22,0:22:29.17:0,29,466	0/0:43,0:42:57.18:0,57,1123	0/1:18,2:20:50.22:50,0,204	1/1:3,0:3:0.89:2,1,0	0/0:18,0:16:42.11:0,42,797	0/0:49,0:49:99:0,123,2252	0/0:8,1:8:3.84:0,4,13	0/0:23,0:23:34.11:0,34,525	0/0:40,0:40:26.71:0,27,541	0/1:3,1:4:0:0,0,0	0/0:35,0:35:84.27:0,84,1522	0/0:61,0:61:99:0,175,3312	0/0:42,0:42:69.15:0,69,1188	0/0:13,0:13:21.07:0,21,391
chr10	6747527	.	TAC	T	2570.83	PASS	AB=0.844;AC=22;AF=0.407;AN=54;BaseQRankSum=0.483;DP=754;FS=4.599;HRun=0;HaplotypeScore=286.6004;InbreedingCoeff=0.4300;MQ=41.26;MQ0=13;MQRankSum=5.139;QD=6.30;ReadPosRankSum=4.111;VQSLOD=2.3288;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:31.57:0,32,638	0/1:10,4:14:92.87:93,0,96	0/0:33,0:13:30.10:0,30,513	0/0:30,0:17:29.88:0,30,478	0/1:17,9:26:99:111,0,133	1/1:29,0:29:45.97:258,46,0	0/1:13,0:13:0.28:27,0,0	0/1:30,7:29:99:170,0,329	1/1:41,0:41:40.42:236,40,0	0/1:20,8:28:99:179,0,248	0/1:20,10:30:99:179,0,234	0/0:17,0:17:26.26:0,26,301	0/0:27,0:27:26.16:0,26,436	0/0:24,0:24:38.13:0,38,430	0/1:17,2:19:25.27:25,0,290	1/1:40,0:39:43.28:246,43,0	0/1:20,1:21:0.31:35,0,0	./.	1/1:16,0:15:30.57:196,31,0	1/1:51,0:51:99:556,105,0	1/1:5,2:6:5.88:42,6,0	0/0:18,0:18:35.04:0,35,386	0/0:38,0:38:59.32:0,59,490	0/0:4,0:4:0:0,0,0	1/1:36,0:36:74.74:405,75,0	0/0:58,1:59:99:0,118,2496	0/0:38,0:38:42.21:0,42,852	0/0:17,0:17:26.97:0,27,386
chr10	6747533	.	CACAT	C	7610.59	PASS	AB=0.993;AC=23;AF=0.426;AN=54;BaseQRankSum=-2.824;DP=714;FS=3.266;HRun=0;HaplotypeScore=270.6740;InbreedingCoeff=0.4356;MQ=41.44;MQ0=11;MQRankSum=4.866;QD=19.51;ReadPosRankSum=6.297;VQSLOD=4.0436;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:32:33.60:0,34,1012	0/1:12,0:12:99:149,0,192	0/0:31,0:13:30.10:0,30,788	0/0:26,0:14:38.92:0,39,822	0/1:22,0:22:99:181,0,245	1/1:24,4:28:47.80:739,48,0	1/1:10,2:12:8.17:106,8,0	0/1:42,0:33:99:276,0,753	1/1:34,5:39:52.17:836,52,0	0/1:26,0:26:99:317,0,478	0/1:29,0:29:99:290,0,432	0/0:15,0:15:27.04:0,27,539	0/0:20,0:20:31.10:0,31,800	0/0:22,0:23:41.99:0,42,788	0/1:16,0:16:53.18:53,0,521	1/1:32,5:36:48.01:797,48,0	0/1:19,1:20:3.73:121,0,4	./.	1/1:15,1:16:39.09:649,39,0	1/1:44,7:51:99:1751,113,0	1/1:5,0:4:3.01:42,3,0	0/0:17,0:17:36.05:0,36,670	0/0:37,0:37:62.29:0,62,796	0/0:3,0:3:0:0,0,0	1/1:33,2:35:81.02:1302,81,0	0/0:56,0:55:99:0,155,3983	0/0:43,0:43:71.60:0,72,1547	0/0:18,0:17:30.02:0,30,590
chr10	6747537	.	TATAA	T	4116.98	PASS	AB=0.876;AC=27;AF=0.500;AN=54;BaseQRankSum=1.192;DP=660;FS=0.000;HRun=0;HaplotypeScore=264.2506;InbreedingCoeff=-0.0373;MQ=41.90;MQ0=10;MQRankSum=4.792;QD=8.18;ReadPosRankSum=2.939;VQSLOD=2.3083;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:32,0:31:58.13:58,0,616	0/1:8,4:12:99:171,0,139	0/0:31,0:14:35.15:0,35,648	0/0:26,0:14:24.80:0,25,480	0/1:10,9:19:99:209,0,121	1/1:26,0:26:33.98:172,34,0	0/1:12,0:12:2.72:65,0,3	0/1:27,10:28:99:443,0,558	1/1:35,0:35:32.41:212,32,0	0/1:10,9:19:99:468,0,256	0/1:15,11:26:99:336,0,210	0/0:10,0:10:3.38:0,3,241	0/1:17,0:17:26.61:27,0,333	0/1:19,1:20:10.06:10,0,342	0/1:11,2:13:64.80:65,0,270	1/1:35,0:34:38.85:223,39,0	0/1:19,0:19:6.55:36,0,7	./.	1/1:15,0:15:27.65:181,28,0	1/1:51,0:51:99:682,108,0	1/1:2,3:4:3.01:47,3,0	0/0:14,0:14:0.93:0,1,279	0/1:32,1:33:95.50:96,0,307	0/0:3,0:3:0:0,0,0	1/1:34,0:34:83.96:578,84,0	0/0:54,0:53:99:0,129,2625	0/1:43,0:42:38.61:39,0,1029	0/0:16,0:15:9.18:0,9,390
chr10	6747542	.	A	ACATG	15923.47	PASS	AB=0.902;AC=34;AF=0.607;AN=56;BaseQRankSum=-8.012;DP=681;FS=23.169;HRun=0;HaplotypeScore=226.2502;InbreedingCoeff=0.4271;MQ=41.94;MQ0=10;MQRankSum=7.590;QD=28.54;ReadPosRankSum=4.365;VQSLOD=3.2228;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,25:35:39.13:1028,39,0	0/1:12,0:12:4.46:4,0,90	0/0:31,0:14:29.97:0,30,366	0/0:24,0:13:27.49:0,27,237	0/0:18,0:18:14.80:0,15,125	1/1:27,0:27:42.09:730,42,0	1/1:15,0:15:15.05:313,15,0	0/1:35,0:27:42.54:242,0,43	1/1:34,1:35:54.02:917,54,0	0/1:17,0:17:99:104,0,163	0/0:26,0:26:1.32:0,1,173	1/1:10,2:12:6.16:67,6,0	0/1:11,5:16:9.99:20,0,10	0/1:17,3:20:9.77:10,0,11	0/0:15,0:15:6:0,6,53	1/1:34,0:33:42.07:751,42,0	1/1:19,0:20:9.09:204,9,0	0/0:4,0:4:2.97:0,3,20	1/1:19,0:19:48.09:844,48,0	1/1:53,0:53:99:2918,135,0	0/0:5,0:5:3:0,3,26	0/1:12,3:15:1.18:1,0,7	0/1:24,12:35:0.40:110,0,0	0/1:3,0:3:0:0,0,0	1/1:35,0:35:93.28:2024,93,0	1/1:4,51:55:99:3016,121,0	1/1:3,42:44:78.18:1972,78,0	1/1:1,16:16:24.08:647,24,0
chr10	6747549	.	T	TACAC	4491.55	PASS	AB=1.000;AC=25;AF=0.446;AN=56;BaseQRankSum=2.797;DP=680;FS=53.381;HRun=0;HaplotypeScore=255.7990;InbreedingCoeff=0.0313;MQ=41.95;MQ0=12;MQRankSum=2.864;QD=9.19;ReadPosRankSum=9.322;VQSLOD=2.0856;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:36,0:35:59.72:382,0,60	0/0:14,0:14:17.36:0,17,151	0/0:33,0:15:20.12:0,20,284	0/0:22,0:11:23.57:0,24,182	0/0:16,0:16:14.63:0,15,126	0/1:27,0:27:64.16:102,0,64	0/1:15,0:15:15.72:65,0,16	0/0:33,0:27:29.59:0,30,332	0/1:36,0:36:99:150,0,111	0/0:21,0:21:1.05:0,1,331	0/0:26,0:26:4.31:0,4,203	1/1:12,2:14:4.11:11,4,0	1/1:15,5:20:2.69:67,3,0	1/1:18,3:21:14.29:76,14,0	0/0:14,0:14:6:0,6,53	0/1:32,0:31:65.14:153,0,65	0/1:18,0:18:48.65:52,0,49	0/0:4,0:4:5.93:0,6,40	0/1:20,0:20:97.07:97,0,133	1/1:53,0:52:61.98:675,62,0	0/0:8,0:8:5.99:0,6,50	1/1:11,3:14:5.67:15,6,0	1/1:23,12:34:25.80:271,26,0	1/1:5,0:5:2.99:23,3,0	0/1:34,0:34:9.25:495,0,9	0/1:51,0:50:99:899,0,148	0/1:43,0:42:40.73:720,0,41	0/1:15,0:14:16.91:237,0,17
chr10	6748152	.	TGAGTTCAAGAC	T	19310.90	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=15.512;DP=521;FS=1.122;HRun=0;HaplotypeScore=173.6734;InbreedingCoeff=0.9976;MQ=72.69;MQ0=1;MQRankSum=-17.365;QD=85.07;ReadPosRankSum=4.506;VQSLOD=4.9966;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,23:23:54.19:2008,54,0	0/0:13,0:13:39.13:0,39,2148	0/0:23,0:21:59.61:0,60,2745	0/0:18,0:17:45.12:0,45,2180	0/0:15,0:15:45.14:0,45,2445	1/1:0,13:13:33.11:1220,33,0	1/1:0,16:16:36.12:1335,36,0	0/0:21,0:21:63.22:0,63,3479	1/1:0,22:22:44.90:1673,45,0	0/0:22,0:22:66.14:0,66,3638	0/0:12,0:12:36.12:0,36,2110	0/0:25,0:25:75.26:0,75,4366	0/0:16,0:16:48.16:0,48,2503	0/0:27,0:27:81.26:0,81,4526	0/0:32,0:32:96.33:0,96,5441	1/1:0,26:26:54.19:2008,54,0	1/1:0,26:26:51.18:1897,51,0	0/0:7,0:7:21.07:0,21,1245	1/1:0,14:14:42.07:1233,42,0	1/1:0,10:10:21.02:779,21,0	0/0:29,0:29:87.30:0,87,4959	0/0:8,0:8:24.08:0,24,1423	0/0:7,0:7:21.07:0,21,1245	0/0:19,0:19:57.20:0,57,3250	1/1:0,19:19:45.15:1673,45,0	1/1:1,15:16:45.14:1582,45,0	1/1:1,31:31:81.28:3010,81,0	1/1:0,10:10:24.08:893,24,0
chr10	6748279	.	AG	A	7106.41	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=8.804;DP=679;FS=8.663;HRun=2;HaplotypeScore=74.6528;InbreedingCoeff=0.9996;MQ=77.77;MQ0=3;MQRankSum=0.868;QD=36.07;ReadPosRankSum=-0.337;VQSLOD=4.8268;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:38:99:0,114,1688	1/1:0,11:11:33.11:428,33,0	0/0:19,0:19:48.14:0,48,655	0/0:15,0:15:42.14:0,42,587	1/1:0,22:22:63.20:818,63,0	0/0:20,0:20:57.19:0,57,844	0/0:23,0:23:63.20:0,63,914	1/1:1,34:34:99:1269,99,0	0/0:36,0:36:99:0,108,1598	1/1:0,25:25:75.24:971,75,0	1/1:0,21:21:57.19:740,57,0	0/0:22,0:22:66.22:0,66,989	0/0:18,0:18:54.18:0,54,809	0/0:39,0:39:99:0,114,1642	1/1:0,30:29:81.26:1051,81,0	0/0:23,0:23:69.23:0,69,1029	0/0:30,0:30:84.28:0,84,1243	1/1:0,14:14:36.12:467,36,0	0/0:17,0:17:48.16:0,48,714	0/0:27,0:27:78.24:0,78,1142	1/1:2,37:38:99:1363,105,0	0/0:21,0:21:63.21:0,63,931	0/0:16,0:16:45.14:0,45,654	0/0:22,0:22:63.21:0,63,925	0/0:23,0:23:69.23:0,69,1022	0/0:34,1:34:60.36:0,60,1382	0/0:29,0:29:87.25:0,87,1274	0/0:8,0:8:24.08:0,24,359
chr10	6748539	.	C	CT	2392.66	PASS	AB=0.804;AC=17;AF=0.304;AN=56;BaseQRankSum=-5.383;DP=438;FS=1.456;HRun=10;HaplotypeScore=68.5345;InbreedingCoeff=0.3751;MQ=74.11;MQ0=5;MQRankSum=-0.972;QD=13.52;ReadPosRankSum=-3.534;VQSLOD=2.9764;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,4:21:35.21:0,35,294	1/1:2,7:9:12.01:119,12,0	0/0:16,0:14:17.55:0,18,167	0/0:14,0:10:22.99:0,23,174	1/1:3,19:21:48.51:487,49,0	0/0:15,0:15:15.58:0,16,233	0/0:18,0:16:35.91:0,36,293	1/1:12,20:32:32.44:523,32,0	0/0:17,0:17:7.14:0,7,264	0/1:5,8:15:35.17:246,0,35	1/1:4,3:7:15.02:147,15,0	0/0:14,0:16:11.29:0,11,232	0/0:12,0:13:35:0,35,277	0/0:14,0:14:35.95:0,36,296	1/1:5,12:17:42.02:421,42,0	0/1:6,0:6:10.84:11,0,81	0/0:32,0:32:62.86:0,63,517	0/1:9,9:18:19.45:319,0,19	0/1:14,2:16:24.72:25,0,155	0/0:14,0:13:17.21:0,17,147	0/1:5,8:13:16.14:245,0,16	0/0:13,0:14:3.93:0,4,136	0/0:5,0:5:8.99:0,9,74	0/1:11,2:13:28.01:28,0,210	0/0:13,0:13:23.82:0,24,187	0/0:19,0:19:41.90:0,42,342	0/0:19,0:19:44.87:0,45,362	0/1:7,0:8:6.33:6,0,87
chr10	6748626	.	C	CG	5417.77	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-13.159;DP=458;FS=0.802;HRun=0;HaplotypeScore=68.5454;InbreedingCoeff=0.9920;MQ=61.73;MQ0=7;MQRankSum=3.335;QD=38.98;ReadPosRankSum=0.318;VQSLOD=5.1427;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:81.24:0,81,1096	1/1:0,7:7:18.06:268,18,0	0/0:18,0:11:29.45:0,29,358	0/0:23,0:16:41.25:0,41,512	1/1:0,13:13:36.12:532,36,0	0/0:15,0:15:45.14:0,45,612	0/0:18,0:18:48.15:0,48,655	1/1:1,24:25:69.08:883,69,0	0/0:17,0:17:48.12:0,48,620	1/1:1,17:18:54.07:748,54,0	1/1:1,20:21:54.18:807,54,0	0/0:11,0:11:33.10:0,33,445	0/0:9,0:9:27.09:0,27,377	0/0:9,0:9:24.07:0,24,318	1/1:0,16:16:42.14:621,42,0	0/0:12,0:12:36.12:0,36,497	0/0:26,0:26:75.19:0,75,976	1/1:0,18:18:48.16:713,48,0	0/0:25,0:25:72.13:0,72,896	0/0:14,0:14:36.12:0,36,502	1/1:0,21:21:57.19:846,57,0	0/0:16,0:16:48.16:0,48,670	0/0:22,0:22:63.18:0,63,843	0/0:12,0:12:33.06:0,33,423	0/0:7,0:7:21.07:0,21,293	0/0:18,1:19:12.59:0,13,709	0/0:8,0:8:24.08:0,24,335	0/0:8,0:8:24.08:0,24,335
chr10	6749193	.	T	TTC	2052.98	PASS	AB=0.750;AC=11;AF=0.196;AN=56;BaseQRankSum=10.190;DP=582;FS=2.669;HRun=0;HaplotypeScore=97.6995;InbreedingCoeff=0.8439;MQ=65.08;MQ0=0;MQRankSum=-9.957;QD=41.90;ReadPosRankSum=1.963;VQSLOD=5.4040;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,141,2217	0/0:11,0:11:33.11:0,33,538	0/0:26,0:22:63.11:0,63,934	0/0:24,0:23:66.19:0,66,1032	0/0:21,0:21:54.17:0,54,855	0/0:22,0:22:66.23:0,66,1067	0/0:26,0:26:78.27:0,78,1271	0/0:27,0:27:81.26:0,81,1278	0/0:30,0:30:90.28:0,90,1416	0/0:28,0:28:84.29:0,84,1371	0/0:18,0:18:51.16:0,51,801	1/1:1,7:8:24.08:420,24,0	1/1:1,11:12:36.12:614,36,0	1/1:2,12:14:42.09:671,42,0	0/0:22,0:22:63.22:0,63,1028	0/0:19,0:19:57.19:0,57,930	0/0:27,0:27:81.28:0,81,1314	0/0:26,0:26:78.24:0,78,1247	0/0:32,0:32:93.32:0,93,1498	0/0:18,0:18:51.17:0,51,828	0/0:30,0:30:90.31:0,90,1461	1/1:1,0:1:3:25,3,0	0/1:2,1:3:39.86:51,0,40	1/1:1,10:11:27.09:444,27,0	0/0:19,0:19:57.19:0,57,920	0/0:26,0:26:78.27:0,78,1272	0/0:27,0:27:81.28:0,81,1316	0/0:7,0:7:21.07:0,21,343
chr10	6749199	.	A	ACTAG	4393.11	PASS	AB=0.875;AC=11;AF=0.196;AN=56;BaseQRankSum=11.473;DP=613;FS=10.026;HRun=0;HaplotypeScore=130.8467;InbreedingCoeff=0.8822;MQ=65.35;MQ0=0;MQRankSum=-10.679;QD=59.37;ReadPosRankSum=-0.010;VQSLOD=6.4506;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,132,2560	0/0:12,0:12:33.11:0,33,642	0/0:26,0:22:60.21:0,60,1144	0/0:24,0:23:66.09:0,66,1237	0/0:21,0:21:63.22:0,63,1225	0/0:20,0:20:60.16:0,60,1158	0/0:27,0:27:78.25:0,78,1495	0/0:28,0:28:78.24:0,78,1456	0/0:35,0:35:99:0,105,1982	0/0:28,0:28:78.27:0,78,1556	0/0:18,0:18:54.19:0,54,1076	1/1:4,7:11:30.10:745,30,0	1/1:2,11:13:39.13:1028,39,0	1/1:2,12:18:45.15:1174,45,0	0/0:22,0:22:63.22:0,63,1258	0/0:19,0:19:57.18:0,57,1103	0/0:26,0:26:78.27:0,78,1556	0/0:27,0:27:78.27:0,78,1537	0/0:30,0:30:90.07:0,90,1653	0/0:19,0:19:57.20:0,57,1137	0/0:30,0:30:90.30:0,90,1748	1/1:7,0:7:15.03:290,15,0	0/1:6,1:7:47.72:195,0,48	1/1:8,10:18:39.13:961,39,0	0/0:20,0:20:54.12:0,54,969	0/0:29,0:29:84.29:0,84,1656	0/0:26,0:26:78.25:0,78,1507	0/0:7,0:7:21.07:0,21,419
chr10	6752562	.	A	AAT	194.98	PASS	AC=6;AF=0.333;AN=18;BaseQRankSum=-1.268;DP=186;FS=0.000;HRun=0;HaplotypeScore=13.3508;MQ=12.12;MQ0=141;MQRankSum=0.906;QD=6.09;ReadPosRankSum=-0.725;VQSLOD=1.7121;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	./.	0/0:15,0:3:6.02:0,6,76	./.	./.	0/0:3,0:2:3.01:0,3,38	./.	./.	0/0:2,0:1:3.01:0,3,38	./.	./.	./.	0/0:4,0:2:5.99:0,6,59	./.	./.	./.	0/0:3,0:3:2.97:0,3,20	./.	./.	./.	./.	0/0:6,0:5:12.04:0,12,152	1/1:1,2:2:3.01:50,3,0	1/1:9,6:4:3.01:50,3,0	1/1:10,4:9:14.93:187,15,0
chr10	6752758	.	TA	T	740.31	PASS	AB=0.778;AC=14;AF=0.500;AN=28;BaseQRankSum=1.437;DP=196;FS=0.000;HRun=16;HaplotypeScore=46.9094;InbreedingCoeff=0.2734;MQ=65.12;MQ0=2;MQRankSum=0.628;QD=6.38;ReadPosRankSum=1.987;VQSLOD=2.3250;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:24:31.87:0,32,199	./.	0/0:12,1:9:1.05:0,1,28	0/0:9,1:6:0.89:0,1,2	./.	0/1:8,0:7:12.01:12,0,19	0/1:4,8:10:4.30:87,0,4	./.	1/1:3,12:17:27.56:155,28,0	./.	./.	./.	./.	./.	./.	1/1:4,7:10:13.63:78,14,0	1/1:4,8:12:25.56:149,26,0	./.	1/1:9,7:16:6.12:139,6,0	0/1:9,7:16:18.48:88,0,18	./.	./.	./.	./.	1/1:4,6:10:20.58:125,21,0	0/0:16,0:16:20.94:0,21,170	0/0:12,1:13:2.92:0,3,124	0/1:8,2:10:25.59:26,0,102
chr10	6754480	.	AAAC	A	7083.25	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=13.855;DP=643;FS=5.788;HRun=0;HaplotypeScore=94.0925;InbreedingCoeff=0.9133;MQ=67.79;MQ0=0;MQRankSum=-2.965;QD=35.77;ReadPosRankSum=-0.076;VQSLOD=5.3888;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,105,2283	1/1:0,12:12:33.02:484,33,0	0/0:7,0:7:16.16:0,16,224	0/1:12,0:12:33.58:34,0,134	1/1:0,25:25:72.06:1028,72,0	0/0:26,0:25:78.25:0,78,1688	0/0:26,0:26:75.26:0,75,1641	1/1:8,23:31:69.19:1030,69,0	0/0:24,0:24:63.19:0,63,1324	1/1:0,27:27:81.23:1268,81,0	1/1:1,20:21:57.11:838,57,0	0/0:21,0:21:63.22:0,63,1352	0/0:26,0:26:63.22:0,63,1391	0/0:23,0:23:63.20:0,63,1352	1/1:0,27:27:69.24:1122,69,0	0/0:23,0:23:69.24:0,69,1498	0/0:34,0:34:96.33:0,96,2086	1/1:2,11:13:24.08:383,24,0	0/0:19,0:20:58.03:0,58,1101	0/0:27,0:27:78.18:0,78,1651	1/1:1,29:30:56.83:897,57,0	0/0:28,0:28:78.27:0,78,1729	0/0:21,0:21:63.10:0,63,1254	0/0:15,0:15:45.15:0,45,966	0/0:22,0:22:63.22:0,63,1391	0/0:20,0:20:57.12:0,57,1188	0/0:26,0:26:78.27:0,78,1712	0/0:20,0:20:60.21:0,60,1326
chr10	6754696	.	T	TG	9904.39	PASS	AB=1.000;AC=49;AF=0.875;AN=56;BaseQRankSum=-6.007;DP=696;FS=7.328;HRun=5;HaplotypeScore=125.8763;InbreedingCoeff=0.5329;MQ=80.97;MQ0=2;MQRankSum=-4.550;QD=17.05;ReadPosRankSum=4.745;VQSLOD=3.5666;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:40,0:40:68.65:608,69,0	1/1:15,1:16:44.33:316,44,0	0/0:62,0:38:54.64:0,55,500	0/0:51,0:32:36.25:0,36,370	1/1:26,0:26:65.73:380,66,0	1/1:1,22:23:48.15:619,48,0	1/1:1,16:17:25.78:352,26,0	1/1:45,0:46:99:624,106,0	1/1:3,13:16:27.09:354,27,0	1/1:17,0:17:48.37:296,48,0	1/1:16,0:16:36.55:210,37,0	0/1:20,0:20:4.97:28,0,5	1/1:13,1:14:6.35:68,6,0	1/1:18,0:18:1.44:50,1,0	1/1:24,0:24:60.98:368,61,0	1/1:2,19:21:43.02:554,43,0	1/1:4,24:28:53.85:677,54,0	1/1:14,0:15:38.01:247,38,0	1/1:5,22:27:70.33:706,70,0	1/1:1,14:15:33.51:413,34,0	1/1:32,0:32:79.49:515,79,0	0/1:22,0:22:6.44:6,0,13	1/1:24,0:24:14.85:108,15,0	0/1:28,0:28:5.74:25,0,6	1/1:1,16:17:36.11:464,36,0	1/1:3,28:31:93.08:1056,93,0	1/1:7,13:19:48.58:585,49,0	1/1:1,7:8:21.07:275,21,0
chr10	6754701	.	GT	G	3098.30	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=7.945;DP=696;FS=1.118;HRun=11;HaplotypeScore=149.9111;InbreedingCoeff=0.9181;MQ=84.30;MQ0=2;MQRankSum=-4.512;QD=15.49;ReadPosRankSum=-0.816;VQSLOD=2.3713;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:0,0:43:70.77:0,71,357	1/1:5,10:15:13.82:226,14,0	0/0:62,2:38:33.13:0,33,414	0/0:48,2:31:9.58:0,10,242	1/1:3,23:27:67.69:528,68,0	0/0:22,0:23:47.22:0,47,306	0/0:17,0:17:28.26:0,28,182	1/1:15,24:43:68.14:568,68,0	0/0:15,0:15:32.67:0,33,229	1/1:4,13:18:44.84:363,45,0	1/1:2,12:16:31.08:305,31,0	0/0:17,0:17:19.95:0,20,184	0/1:14,0:14:6.13:6,0,129	0/0:18,0:18:47.92:0,48,248	1/1:1,20:22:59.10:471,59,0	0/0:20,0:20:44.28:0,44,290	0/0:30,0:30:68.15:0,68,482	1/1:4,10:14:29.93:245,30,0	0/0:27,0:28:58.95:0,59,437	0/0:16,0:16:44.07:0,44,305	1/1:2,28:31:74.02:593,74,0	0/0:24,0:24:25.60:0,26,283	0/0:23,0:23:55.04:0,55,281	0/0:26,1:27:31.09:0,31,322	0/0:16,0:16:35.49:0,35,231	0/0:31,1:34:55.50:0,56,499	0/0:21,0:20:53.28:0,53,358	0/0:8,0:8:23.75:0,24,169
chr10	6755032	.	GGC	G	562.49	PASS	AB=0.940;AC=16;AF=0.286;AN=56;BaseQRankSum=5.656;DP=595;FS=46.560;HRun=0;HaplotypeScore=150.5507;InbreedingCoeff=0.2466;MQ=69.38;MQ0=8;MQRankSum=-2.741;QD=2.41;ReadPosRankSum=0.487;VQSLOD=1.2255;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:27:12.42:12,0,98	0/0:8,0:8:15.13:0,15,240	0/0:32,0:22:66.14:0,66,1118	0/0:38,0:23:20.57:0,21,487	0/0:17,0:17:23.24:0,23,342	0/1:16,1:17:83.41:83,0,130	0/1:23,1:24:17.15:17,0,23	0/0:33,0:33:96.31:0,96,1612	0/1:29,0:29:8.73:9,0,263	0/0:28,0:28:70.87:0,71,1004	0/0:14,0:14:21.32:0,21,341	0/0:27,0:27:74.85:0,75,1148	0/0:21,0:21:56.27:0,56,847	0/0:25,0:25:72.22:0,72,1205	0/0:26,0:26:38.36:0,38,783	0/1:19,2:21:99:200,0,100	0/1:23,2:25:80.74:81,0,150	0/0:14,0:14:38.42:0,38,442	0/1:10,3:13:29.53:126,0,30	1/1:12,0:12:2.01:41,2,0	0/0:22,0:22:27.29:0,27,690	0/0:14,0:14:39.06:0,39,524	0/0:13,0:13:33.04:0,33,490	0/0:30,0:30:79:0,79,1220	0/1:9,0:9:2.85:12,0,3	1/1:23,0:23:17.77:101,18,0	1/1:23,1:24:7.50:33,8,0	1/1:7,0:7:3.24:13,3,0
chr10	6755033	.	GCA	G	2337.47	PASS	AB=0.934;AC=19;AF=0.339;AN=56;BaseQRankSum=-0.449;DP=590;FS=2.173;HRun=0;HaplotypeScore=142.0914;InbreedingCoeff=0.3084;MQ=69.45;MQ0=8;MQRankSum=-1.086;QD=8.96;ReadPosRankSum=1.075;VQSLOD=3.4666;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:9,20:28:32.14:32,0,50	0/0:7,0:7:7.24:0,7,116	0/0:32,0:22:49.30:0,49,525	0/0:38,0:23:30.50:0,30,287	0/0:15,0:15:23.09:0,23,186	0/1:15,1:16:10.47:206,0,10	1/1:5,19:24:6.28:58,6,0	0/0:33,0:33:89.94:0,90,788	0/1:30,0:29:26.52:348,0,27	0/0:28,0:28:55.87:0,56,439	0/1:14,0:14:1.49:1,0,129	0/0:28,0:28:58.60:0,59,746	0/0:21,0:21:33.32:0,33,487	0/0:25,0:25:66.02:0,66,804	0/0:26,0:26:3.78:0,4,299	0/1:18,3:21:16.16:376,0,16	0/1:24,0:24:28.57:320,0,29	0/1:14,0:14:8.61:9,0,139	0/1:13,0:13:0.19:209,0,0	1/1:12,0:12:23.95:196,24,0	0/0:22,0:22:18.86:0,19,289	0/0:13,0:13:26.94:0,27,371	0/0:14,0:14:32.90:0,33,375	0/0:27,0:27:50.50:0,50,732	1/1:9,0:9:7.76:194,8,0	1/1:23,0:23:54.23:437,54,0	1/1:23,0:24:13.86:89,14,0	0/1:8,0:8:30.84:44,0,31
chr10	6755034	.	CACAGAGAG	C	1975.91	PASS	AB=0.968;AC=13;AF=0.232;AN=56;BaseQRankSum=-4.483;DP=580;FS=24.592;HRun=0;HaplotypeScore=197.4590;InbreedingCoeff=0.2633;MQ=69.74;MQ0=8;MQRankSum=-0.542;QD=10.98;ReadPosRankSum=-2.315;VQSLOD=0.7802;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:27:11.97:0,12,325	0/0:7,0:7:20.85:0,21,253	0/0:32,0:22:49.30:0,49,525	0/0:38,0:23:24.54:0,25,275	0/0:15,0:15:17.55:0,18,157	0/1:16,0:16:99:99,0,458	0/0:23,0:23:9.03:0,9,147	0/0:30,0:30:90.04:0,90,866	0/1:26,0:27:99:249,0,559	0/0:26,0:26:74.89:0,75,941	0/0:14,0:14:35.89:0,36,481	0/0:27,0:27:74.89:0,75,1383	0/0:19,0:19:50.16:0,50,993	0/0:24,0:24:66.08:0,66,1442	0/0:27,0:27:74.61:0,75,1256	0/1:20,0:22:99:124,0,715	0/1:23,0:25:94.02:94,0,740	0/0:14,0:14:41.88:0,42,611	0/1:13,0:13:99:105,0,327	0/1:12,0:12:22.28:146,0,22	0/0:21,0:21:50.73:0,51,764	0/0:13,0:13:35.92:0,36,695	0/0:15,0:15:35.93:0,36,605	0/0:27,0:27:75.24:0,75,1572	0/1:9,0:9:99:118,0,163	1/1:0,22:23:55.93:684,56,0	1/1:2,21:24:14.72:312,15,0	1/1:1,6:8:7.89:214,8,0
chr10	6755036	.	CAG	C	1254.93	PASS	AB=0.987;AC=28;AF=0.560;AN=50;BaseQRankSum=3.801;DP=596;FS=0.839;HRun=0;HaplotypeScore=145.9897;InbreedingCoeff=-0.0421;MQ=68.33;MQ0=10;MQRankSum=-1.915;QD=3.33;ReadPosRankSum=2.877;VQSLOD=2.6607;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:32:4.88:0,5,207	1/1:7,0:7:3.01:32,3,0	./.	./.	0/0:14,3:16:2.21:0,2,28	0/1:17,0:17:9.06:9,0,120	0/1:23,0:23:10.39:10,0,14	./.	0/0:29,0:28:8.30:0,8,232	1/1:26,1:27:17.42:124,17,0	1/1:12,2:14:14.87:143,15,0	0/1:27,0:27:34.58:35,0,232	0/1:19,0:19:44.12:44,0,165	0/0:24,0:24:27.08:0,27,322	1/1:26,0:26:29.70:305,30,0	0/1:23,0:22:69.10:69,0,170	0/1:26,1:27:28.74:29,0,222	1/1:15,0:15:21.03:216,21,0	0/1:9,1:10:23.45:23,0,75	0/1:15,0:15:8.65:9,0,19	1/1:22,0:22:14.99:154,15,0	0/1:13,0:13:38.53:39,0,139	0/0:16,0:16:17.93:0,18,195	0/1:27,1:27:63.93:64,0,243	0/1:9,0:9:5.69:6,0,82	1/1:23,0:23:11.22:55,11,0	1/1:24,0:24:4.89:36,5,0	0/1:8,0:8:15.37:15,0,22
chr10	6755296	.	C	CT	463.85	PASS	AC=8;AF=0.154;AN=52;BaseQRankSum=0.525;DP=423;FS=19.936;HRun=7;HaplotypeScore=60.5597;InbreedingCoeff=0.7817;MQ=32.13;MQ0=100;MQRankSum=-1.805;QD=5.73;ReadPosRankSum=-0.416;VQSLOD=-0.2275;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:19,7:12:12.04:145,12,0	0/0:6,0:4:8.60:0,9,86	./.	./.	0/0:21,0:17:17.57:0,18,172	0/0:16,0:14:24.02:0,24,226	0/0:14,0:10:30.05:0,30,289	0/0:20,0:19:35.27:0,35,343	0/0:13,0:10:15.01:0,15,145	0/0:30,0:25:33.11:0,33,341	0/0:16,0:11:13.96:0,14,143	0/0:15,0:12:24.04:0,24,231	0/0:12,0:9:0.80:0,1,122	0/0:9,0:9:17.60:0,18,173	0/0:12,0:7:8.67:0,9,86	0/0:10,0:9:15.02:0,15,145	0/0:31,0:19:45.07:0,45,431	0/0:15,0:9:16.40:0,16,171	0/0:13,0:10:15:0,15,138	0/0:10,0:10:26.07:0,26,237	0/0:10,0:5:8.68:0,9,86	0/0:10,0:8:5.90:0,6,102	0/0:15,0:11:11.50:0,11,115	0/0:19,0:8:11.91:0,12,115	0/0:13,0:12:24.04:0,24,232	1/1:16,5:20:17.18:163,17,0	1/1:14,6:15:25.04:249,25,0	1/1:11,2:6:5.91:52,6,0
chr10	6755437	.	ATT	A	5329.79	PASS	AB=0.649;AC=44;AF=0.815;AN=54;BaseQRankSum=0.109;DP=340;FS=5.077;HRun=12;HaplotypeScore=80.4137;InbreedingCoeff=0.7074;MQ=74.13;MQ0=0;MQRankSum=-5.327;QD=18.64;ReadPosRankSum=1.914;VQSLOD=4.3228;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,26:32:69.76:682,70,0	./.	0/1:10,4:13:54.10:94,0,54	0/0:10,0:10:22.58:0,23,219	1/1:1,9:11:18:183,18,0	0/1:3,9:12:11.68:217,0,12	1/1:4,11:15:33.02:336,33,0	1/1:6,15:21:41.83:479,42,0	1/1:2,7:9:18.01:183,18,0	1/1:0,13:13:36.08:366,36,0	1/1:0,5:5:15.03:153,15,0	1/1:2,0:13:32.50:137,32,0	1/1:0,0:6:16.09:68,16,0	1/1:0,0:5:13.35:55,13,0	1/1:2,12:14:36.08:366,36,0	1/1:2,3:5:9.01:92,9,0	1/1:5,15:20:36.05:366,36,0	1/1:0,16:16:48.11:488,48,0	1/1:3,5:8:15:152,15,0	1/1:1,8:9:21.02:214,21,0	1/1:8,9:18:38.75:357,39,0	1/1:3,0:7:15.42:61,15,0	1/1:1,0:10:24.17:102,24,0	1/1:2,0:15:28.70:119,29,0	1/1:1,4:5:6.01:61,6,0	0/0:3,0:19:37.31:0,37,131	0/0:0,0:14:29.82:0,30,105	0/0:1,0:10:22.46:0,22,79
chr10	6755464	.	TG	T	4390.41	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-2.781;DP=360;FS=12.109;HRun=8;HaplotypeScore=88.0412;InbreedingCoeff=0.8915;MQ=74.50;MQ0=0;MQRankSum=-3.200;QD=23.11;ReadPosRankSum=-0.066;VQSLOD=4.2731;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:57.13:0,57,664	1/1:0,1:1:3:29,3,0	0/0:18,1:16:9.94:0,10,263	0/0:14,0:13:14.96:0,15,136	1/1:2,15:17:48.06:458,48,0	0/0:5,0:9:17.20:0,17,98	0/0:8,0:16:34.46:0,34,192	1/1:6,14:20:45:419,45,0	0/0:5,0:8:14.78:0,15,74	1/1:2,13:15:39.06:376,39,0	1/1:0,9:9:24.04:231,24,0	1/1:0,15:15:45.07:434,45,0	1/1:2,8:10:21.03:203,21,0	1/1:1,9:10:24.04:232,24,0	1/1:3,13:16:42.06:400,42,0	0/0:2,0:4:2.88:0,3,15	0/0:13,1:20:5.90:0,6,156	1/1:5,17:22:48.08:463,48,0	0/0:2,0:7:14.14:0,14,70	0/0:5,0:6:6.09:0,6,30	1/1:1,15:16:36.05:342,36,0	1/1:1,8:9:27.04:260,27,0	1/1:3,8:11:27.03:254,27,0	1/1:5,14:19:30.04:290,30,0	0/0:1,0:2:5.77:0,6,31	0/0:15,0:15:33.09:0,33,388	0/0:18,0:18:48.15:0,48,580	0/0:7,0:7:21.06:0,21,254
chr10	6755910	.	ATGTTTGTTTGTT	A	6924.50	PASS	AB=0.909;AC=47;AF=0.870;AN=54;BaseQRankSum=3.190;DP=511;FS=2.954;HRun=0;HaplotypeScore=174.3054;InbreedingCoeff=0.3539;MQ=62.41;MQ0=2;MQRankSum=-1.663;QD=16.33;ReadPosRankSum=3.974;VQSLOD=3.9540;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:35:3.01:51,3,0	1/1:3,2:5:3.01:103,3,0	0/0:29,0:20:9.03:0,9,304	0/0:22,0:16:12.04:0,12,563	1/1:15,7:22:7.47:197,7,0	1/1:13,11:24:24.08:755,24,0	1/1:16,9:25:3.01:103,3,0	1/1:28,0:28:6.02:135,6,0	1/1:6,9:15:18.06:620,18,0	1/1:14,7:21:21.07:627,21,0	0/0:7,4:11:2.04:0,2,6	1/1:1,0:6:6.02:168,6,0	1/1:11,0:18:8.06:174,8,0	1/1:5,0:8:6.02:168,6,0	1/1:12,8:20:9.03:310,9,0	1/1:8,11:19:21.07:724,21,0	1/1:13,5:18:9.03:247,9,0	0/1:18,2:20:27.95:97,0,28	1/1:13,1:14:3.01:103,3,0	1/1:9,7:16:9.03:244,9,0	1/1:10,0:10:9.03:194,9,0	1/1:13,0:18:6.49:114,6,0	1/1:10,0:17:3.01:83,3,0	1/1:11,0:13:6.02:114,6,0	1/1:9,9:19:27.09:840,27,0	1/1:11,0:24:24.08:670,24,0	./.	1/1:8,0:9:3.01:84,3,0
chr10	6756094	.	A	AAAAAC	11637.81	PASS	AB=0.750;AC=23;AF=0.411;AN=56;BaseQRankSum=-12.562;DP=595;FS=6.861;HRun=0;HaplotypeScore=163.5499;InbreedingCoeff=0.8811;MQ=64.92;MQ0=0;MQRankSum=9.035;QD=39.99;ReadPosRankSum=2.759;VQSLOD=4.2098;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:17,2:27:32.90:633,33,0	0/0:4,0:11:18.05:0,18,209	0/0:20,0:14:8.61:0,9,149	0/0:35,0:23:17.96:0,18,267	0/0:7,0:28:39.12:0,39,454	1/1:10,20:31:54.19:1501,54,0	0/1:16,6:24:31.13:375,0,31	0/0:14,0:30:24.45:0,24,280	1/1:8,10:19:21.07:576,21,0	0/0:6,0:14:18.05:0,18,210	0/0:8,0:11:9.03:0,9,105	0/0:2,0:7:12.04:0,12,140	0/0:8,0:15:18.05:0,18,210	0/0:10,0:14:11.53:0,12,139	0/0:6,0:15:18.05:0,18,210	1/1:9,26:36:70.12:1933,70,0	1/1:18,20:38:43.62:1338,44,0	0/0:8,0:14:15.04:0,15,175	1/1:6,11:18:33.08:805,33,0	1/1:10,12:23:39.13:1039,39,0	0/0:12,0:17:9.03:0,9,105	0/0:5,0:17:27.08:0,27,314	0/0:7,0:22:41.93:0,42,489	0/0:17,0:34:29.72:0,30,347	1/1:6,9:16:24.08:672,24,0	1/1:12,13:27:16.28:1169,16,0	1/1:8,13:23:33.11:924,33,0	1/1:0,9:9:24.08:672,24,0
chr10	6756928	.	G	GA	3548.29	PASS	AB=0.880;AC=17;AF=0.304;AN=56;BaseQRankSum=-9.692;DP=639;FS=0.374;HRun=10;HaplotypeScore=71.9944;InbreedingCoeff=0.7347;MQ=74.21;MQ0=0;MQRankSum=-0.356;QD=15.77;ReadPosRankSum=-2.062;VQSLOD=3.4730;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:60,0:62:99:0,154,1229	1/1:2,10:13:21.82:208,22,0	0/1:21,0:19:1.47:1,0,183	0/1:15,0:14:19.28:19,0,37	1/1:7,23:30:38.95:604,39,0	0/0:15,0:18:43:0,43,329	0/0:19,0:19:47.93:0,48,391	1/1:13,18:32:16.61:547,17,0	0/0:24,0:24:59.91:0,60,492	0/1:7,9:16:16.23:246,0,16	1/1:6,15:22:20.30:392,20,0	0/0:19,0:19:53.91:0,54,440	0/0:21,0:21:50.92:0,51,419	0/0:25,0:25:65.91:0,66,541	1/1:4,21:27:16.55:555,17,0	0/0:20,0:20:41.92:0,42,345	0/0:27,0:27:74.87:0,75,608	1/1:6,19:25:48.12:512,48,0	0/0:14,1:15:0.35:0,0,198	0/0:19,0:19:44.86:0,45,359	1/1:5,17:23:45.01:464,45,0	0/0:16,0:16:32.95:0,33,270	0/0:18,0:18:44.93:0,45,369	0/0:24,0:25:63.93:0,64,496	0/0:24,0:24:50.91:0,51,419	0/0:29,1:31:38.94:0,39,516	0/0:22,0:22:50.93:0,51,419	0/0:8,0:8:11.94:0,12,98
chr10	6758474	.	TA	T	1378.98	PASS	AC=46;AF=0.885;AN=52;BaseQRankSum=1.176;DP=458;FS=4.958;HRun=2;HaplotypeScore=66.0177;InbreedingCoeff=0.4295;MQ=59.46;MQ0=67;MQRankSum=-2.718;QD=3.72;ReadPosRankSum=0.817;VQSLOD=0.4847;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:24,1:21:0.47:1,0,0	1/1:3,0:3:1.77:5,2,0	0/0:29,1:15:4.06:0,4,366	0/0:27,0:16:35.85:0,36,342	1/1:19,2:16:8.10:53,8,0	1/1:15,0:13:0.47:1,0,0	1/1:13,0:8:6.02:74,6,0	1/1:14,0:10:24.05:280,24,0	1/1:9,1:6:3.01:35,3,0	1/1:11,1:11:25.34:262,25,0	1/1:14,0:12:4.21:11,4,0	1/1:20,0:19:1.39:4,1,0	1/1:13,0:11:4.55:36,5,0	1/1:17,0:17:4.74:25,5,0	1/1:16,0:12:4.75:27,5,0	1/1:14,0:13:3.13:7,3,0	1/1:13,2:12:7.61:65,8,0	1/1:11,0:8:3.02:8,3,0	1/1:13,0:11:29.93:323,30,0	1/1:8,0:7:2.49:9,2,0	1/1:45,1:41:15.36:72,15,0	1/1:14,0:13:5.95:50,6,0	0/0:13,1:11:0:0,0,0	1/1:29,2:28:0.89:2,1,0	./.	1/1:11,1:9:13.77:139,14,0	1/1:11,0:8:0.89:2,1,0	./.
chr10	6758475	.	A	AC	4338.16	PASS	AC=50;AF=0.926;AN=54;BaseQRankSum=1.591;DP=612;FS=7.185;HRun=0;HaplotypeScore=143.4271;InbreedingCoeff=0.4879;MQ=53.58;MQ0=67;MQRankSum=-3.744;QD=8.02;ReadPosRankSum=-0.081;VQSLOD=4.3210;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,23:33:3.47:28,3,0	1/1:0,0:4:6.01:58,6,0	0/0:30,0:14:4.06:0,4,366	0/0:28,0:16:35.52:0,36,341	1/1:2,8:18:13.81:139,14,0	1/1:7,16:21:0.17:0,0,0	1/1:9,11:14:11.89:133,12,0	1/1:6,14:16:30.96:366,31,0	1/1:7,8:11:2.80:35,3,0	1/1:5,12:15:38.79:468,39,0	1/1:1,5:17:12.03:156,12,0	1/1:11,1:29:17.66:222,18,0	1/1:4,11:14:18.04:217,18,0	1/1:10,2:26:15.03:157,15,0	1/1:3,4:19:11.77:118,12,0	1/1:4,3:17:11.77:119,12,0	1/1:13,12:20:25.88:287,26,0	1/1:3,1:9:15.02:151,15,0	1/1:2,13:13:36.10:461,36,0	1/1:5,2:12:3.01:32,3,0	1/1:9,8:50:43.87:439,44,0	1/1:4,14:17:8.39:115,8,0	1/1:8,12:17:2.23:34,2,0	1/1:12,4:41:5.72:56,6,0	./.	1/1:7,3:17:33.48:341,33,0	1/1:8,2:15:17.97:173,18,0	1/1:6,1:5:3:28,3,0
chr10	6759610	.	C	CG	5733.82	PASS	AB=0.522;AC=27;AF=0.500;AN=54;BaseQRankSum=-4.671;DP=433;FS=0.892;HRun=1;HaplotypeScore=73.0410;InbreedingCoeff=0.8962;MQ=44.75;MQ0=10;MQRankSum=-2.970;QD=26.67;ReadPosRankSum=0.204;VQSLOD=4.6077;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:23:42.07:0,42,494	1/1:3,6:9:21.01:260,21,0	./.	0/0:3,0:1:2.96:0,3,19	1/1:8,19:27:63.13:826,63,0	0/0:19,0:19:44.95:0,45,521	0/0:31,0:29:54.07:0,54,641	1/1:7,16:19:44.66:556,45,0	0/0:6,0:6:15.04:0,15,180	1/1:4,11:15:36.05:487,36,0	1/1:1,13:14:23.91:299,24,0	1/1:3,15:18:35.70:473,36,0	1/1:4,7:11:33.03:407,33,0	1/1:1,13:14:29.89:414,30,0	1/1:4,10:14:36.04:489,36,0	0/0:11,0:11:30.07:0,30,350	0/0:25,0:24:45.09:0,45,530	1/1:2,12:14:24.08:357,24,0	0/0:17,0:15:35.80:0,36,403	0/0:16,0:16:36.09:0,36,431	0/1:1,11:11:14.71:91,0,15	1/1:2,14:16:39.05:553,39,0	1/1:2,14:16:26.92:357,27,0	1/1:3,9:11:14.78:165,15,0	0/0:18,0:17:36.06:0,36,418	0/0:17,0:17:42.08:0,42,507	0/0:15,0:15:32.89:0,33,405	0/0:12,0:8:18.06:0,18,233
chr10	6761025	.	AT	A	9703.95	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-1.918;DP=571;FS=3.269;HRun=9;HaplotypeScore=87.3811;InbreedingCoeff=0.8761;MQ=74.19;MQ0=0;MQRankSum=-4.403;QD=17.58;ReadPosRankSum=2.760;VQSLOD=5.2042;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,36:36:99:934,102,0	1/1:0,0:5:8.15:24,8,0	0/0:12,0:13:11.25:0,11,132	0/0:6,0:6:5.85:0,6,49	1/1:1,0:27:52.96:156,53,0	1/1:1,27:28:81.04:741,81,0	1/1:4,9:13:24:220,24,0	1/1:6,0:23:31.82:99,32,0	1/1:1,24:25:63.03:577,63,0	1/1:3,0:25:43.25:127,43,0	1/1:1,0:26:44.81:132,45,0	1/1:6,16:22:45.01:412,45,0	1/1:2,18:20:45.02:412,45,0	1/1:2,20:22:57.03:522,57,0	1/1:2,0:28:48.89:144,49,0	1/1:2,17:19:47.96:430,48,0	1/1:2,27:28:78.03:714,78,0	1/1:0,0:13:24.44:72,24,0	1/1:3,11:14:32.96:288,33,0	1/1:2,25:27:69.03:632,69,0	1/1:4,0:25:34.63:102,35,0	1/1:1,14:15:39.01:357,39,0	1/1:3,15:18:45.02:412,45,0	1/1:1,16:17:28.10:368,28,0	1/1:3,31:34:90.05:824,90,0	1/1:1,18:19:54:488,54,0	1/1:0,14:14:42.02:384,42,0	1/1:2,6:8:15.01:137,15,0
chr10	6761511	.	GA	G	199.98	PASS	AB=0.873;AC=9;AF=0.161;AN=56;BaseQRankSum=9.289;DP=438;FS=5.478;HRun=3;HaplotypeScore=122.0950;InbreedingCoeff=-0.1771;MQ=49.28;MQ0=0;MQRankSum=-8.350;QD=1.43;ReadPosRankSum=-1.073;VQSLOD=-0.7339;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:18:4.67:0,5,326	0/1:9,0:9:47.35:47,0,144	0/0:21,0:15:39.13:0,39,546	0/0:18,0:10:30.08:0,30,402	0/0:11,0:11:10.77:0,11,364	0/0:19,1:19:57.19:0,57,821	0/0:13,0:13:39.12:0,39,540	0/0:11,0:10:24.08:0,24,342	0/0:17,0:17:48.13:0,48,652	0/1:18,1:18:36.57:37,0,423	0/1:12,2:13:43.34:43,0,349	0/0:10,1:11:24.41:0,24,327	0/1:19,10:28:85.05:85,0,600	0/1:8,4:12:9.63:10,0,291	0/1:19,4:23:64.42:64,0,505	0/0:15,0:15:45.15:0,45,648	0/0:27,0:27:81.13:0,81,1112	0/1:7,1:8:39.91:40,0,155	0/0:5,0:5:15.02:0,15,192	0/0:27,0:27:81.23:0,81,1108	0/1:12,1:13:0.05:0,0,314	0/0:14,4:18:11.85:0,12,440	0/1:11,2:13:0.98:1,0,247	0/0:15,2:17:36.40:0,36,554	0/0:8,0:7:24.08:0,24,346	0/0:18,0:18:48.16:0,48,689	0/0:17,0:17:51.15:0,51,713	0/0:5,0:5:15.05:0,15,216
chr10	6761512	.	A	AAGG	1385.98	PASS	AB=0.905;AC=12;AF=0.214;AN=56;BaseQRankSum=9.791;DP=438;FS=4.035;HRun=0;HaplotypeScore=136.0281;InbreedingCoeff=-0.2623;MQ=50.09;MQ0=0;MQRankSum=-9.474;QD=7.57;ReadPosRankSum=-0.755;VQSLOD=3.0773;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:18:26.14:0,26,346	0/1:4,5:9:99:265,0,148	0/0:20,0:14:39.12:0,39,607	0/0:19,0:11:30.01:0,30,446	0/1:9,2:11:55.68:56,0,389	0/0:20,0:19:57.20:0,57,1005	0/0:13,0:13:39.09:0,39,568	0/0:12,0:10:24.07:0,24,356	0/0:17,0:17:48.13:0,48,768	0/1:13,5:17:99:310,0,469	0/1:12,2:13:99:131,0,401	0/0:11,0:11:5.36:0,5,341	0/1:29,0:28:99:170,0,609	0/1:13,0:13:20.32:20,0,333	0/1:18,2:20:99:255,0,617	0/0:15,0:15:45.15:0,45,783	0/0:27,0:27:80.74:0,81,1301	0/1:6,2:8:99:143,0,172	0/0:5,0:5:15.01:0,15,208	0/0:27,0:27:81.23:0,81,1309	0/1:13,0:13:0.12:0,0,343	0/1:17,0:17:55.71:56,0,437	0/1:14,0:14:99:118,0,260	0/1:17,0:17:7.23:7,0,581	0/0:9,0:8:24.08:0,24,423	0/0:18,0:18:48.15:0,48,798	0/0:18,0:18:51.16:0,51,838	0/0:5,0:5:15.05:0,15,265
chr10	6761528	.	G	GAAGGAAGAAAGA	7026.62	PASS	AB=1.000;AC=27;AF=0.482;AN=56;BaseQRankSum=13.251;DP=404;FS=17.034;HRun=0;HaplotypeScore=181.3859;InbreedingCoeff=0.6077;MQ=46.76;MQ0=1;MQRankSum=-10.727;QD=30.55;ReadPosRankSum=4.234;VQSLOD=2.7291;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,10:16:9.01:320,9,0	1/1:8,0:8:21.87:332,22,0	0/0:19,0:10:7.44:0,7,406	0/1:24,0:10:34.46:34,0,403	0/1:12,0:12:20.88:294,0,21	0/0:19,0:18:54.17:0,54,1637	0/0:8,0:8:24.05:0,24,682	0/1:11,0:9:29.42:67,0,29	0/0:14,0:14:41.87:0,42,1227	1/1:15,0:14:9.91:483,10,0	1/1:11,0:10:26.97:405,27,0	0/1:15,0:15:74.85:355,0,75	1/1:27,0:27:59.94:1506,60,0	1/1:11,0:11:19.91:313,20,0	1/1:18,0:18:50.93:695,51,0	0/0:17,0:17:48.15:0,48,1411	0/0:27,0:27:66.77:0,67,1995	1/1:9,0:9:20.48:307,20,0	0/0:6,0:6:17.92:0,18,282	0/0:19,0:19:56.92:0,57,1345	1/1:10,0:10:17.54:152,18,0	0/1:11,0:11:30:514,0,30	1/1:15,0:15:20.98:728,21,0	1/1:15,0:15:14.66:521,15,0	0/0:10,0:9:27.09:0,27,806	0/0:14,0:14:42.13:0,42,1225	0/0:16,0:16:48.12:0,48,1432	0/0:5,0:5:15.05:0,15,446
chr10	6761530	.	A	AG	1752.13	PASS	AB=0.777;AC=18;AF=0.321;AN=56;BaseQRankSum=9.623;DP=398;FS=23.775;HRun=1;HaplotypeScore=119.4400;InbreedingCoeff=-0.0054;MQ=46.62;MQ0=1;MQRankSum=-6.762;QD=8.72;ReadPosRankSum=1.519;VQSLOD=-0.1584;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:16,0:15:2.43:2,0,34	0/1:7,1:8:20.66:47,0,21	0/0:17,0:9:26.65:0,27,299	0/0:21,0:10:19.76:0,20,212	0/1:7,5:12:12.82:146,0,13	0/0:19,0:18:54.17:0,54,688	0/0:8,0:8:24.06:0,24,297	0/1:10,1:9:16.87:45,0,17	0/0:14,0:14:42.14:0,42,545	1/1:8,6:13:7.50:192,8,0	0/1:6,4:9:43.27:97,0,43	0/1:8,6:15:28.56:193,0,29	0/1:15,13:27:95.52:266,0,96	0/1:7,4:11:64.23:107,0,64	0/1:11,6:17:25.10:230,0,25	0/0:17,0:17:48.16:0,48,623	0/0:27,0:27:81.26:0,81,1035	0/1:7,1:8:18.62:48,0,19	0/0:7,0:7:21.05:0,21,256	0/0:19,0:19:57.04:0,57,699	1/1:8,2:10:4.61:114,5,0	0/1:6,4:11:44.55:109,0,45	0/1:8,7:15:27.52:129,0,28	1/1:7,8:15:14.33:197,14,0	0/0:9,0:8:27.09:0,27,350	0/0:14,0:14:42.14:0,42,545	0/0:16,0:16:48.15:0,48,609	0/0:5,0:5:15.05:0,15,195
chr10	6761532	.	A	AAGGAAGGAAGGAAGG	13096.18	PASS	AB=1.000;AC=27;AF=0.482;AN=56;BaseQRankSum=14.261;DP=400;FS=0.950;HRun=0;HaplotypeScore=183.5477;InbreedingCoeff=0.7773;MQ=46.48;MQ0=1;MQRankSum=-11.153;QD=65.16;ReadPosRankSum=3.951;VQSLOD=4.7130;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:16,0:15:64.38:64,0,103	1/1:7,0:7:21.07:608,21,0	0/0:18,0:9:21.69:0,22,620	0/0:25,0:10:23.54:0,24,629	1/1:12,0:12:29.19:725,29,0	0/0:19,0:18:54.10:0,54,1989	0/0:7,0:7:21.07:0,21,798	0/1:11,0:9:12.16:217,0,12	0/0:14,0:14:42.14:0,42,1537	1/1:14,0:13:39.03:1162,39,0	1/1:10,0:10:27.07:689,27,0	1/1:14,1:15:41.46:851,41,0	1/1:23,5:27:76.31:2872,76,0	1/1:10,0:10:30.10:741,30,0	1/1:16,0:17:28.62:1139,29,0	0/0:17,0:17:51.17:0,51,1840	0/0:27,0:27:81.27:0,81,2757	1/1:8,0:8:21.06:646,21,0	0/0:7,0:7:20.99:0,21,332	0/0:20,0:20:57.11:0,57,1773	0/1:11,0:11:25.03:183,0,25	1/1:9,2:11:32.30:1060,32,0	1/1:11,4:15:20.57:1311,21,0	1/1:13,2:15:10.32:827,10,0	0/0:9,0:8:27.09:0,27,971	0/0:15,0:15:42.13:0,42,1559	0/0:16,0:16:45.15:0,45,1708	0/0:5,0:5:15.05:0,15,647
chr10	6761561	.	A	AG	198.72	PASS	AB=0.882;AC=6;AF=0.107;AN=56;BaseQRankSum=5.844;DP=355;FS=20.231;HRun=0;HaplotypeScore=116.6795;InbreedingCoeff=-0.1211;MQ=50.75;MQ0=7;MQRankSum=-5.722;QD=2.80;ReadPosRankSum=-0.156;VQSLOD=1.5890;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:13:24.04:0,24,303	0/0:8,0:8:24.08:0,24,334	0/0:30,0:5:15.03:0,15,190	0/0:40,0:13:24.50:0,25,266	0/0:12,0:12:12.28:0,12,285	0/0:13,0:13:39.09:0,39,481	0/0:9,0:9:27.07:0,27,332	0/0:12,0:10:24.05:0,24,315	0/0:10,0:10:30.09:0,30,403	0/0:13,0:13:27.81:0,28,424	0/0:8,0:7:7.66:0,8,196	0/0:10,0:10:29.99:0,30,393	0/1:17,4:20:99:104,0,533	0/1:7,1:8:17.06:17,0,268	0/0:14,0:14:23.50:0,24,377	0/0:12,0:12:36.12:0,36,503	0/0:19,0:19:11.81:0,12,555	0/0:9,0:9:16.36:0,16,172	0/0:4,0:4:12.04:0,12,167	0/0:10,0:10:27.07:0,27,347	0/1:7,4:11:61.85:157,0,62	0/1:9,0:9:5.34:5,0,275	0/1:12,1:13:3.46:3,0,394	0/1:8,1:9:26.30:26,0,153	0/0:8,0:8:24.06:0,24,295	0/0:13,0:13:39.12:0,39,516	0/0:14,0:14:42.12:0,42,555	0/0:2,0:2:6.02:0,6,84
chr10	6761562	.	A	AG	479.31	PASS	AB=0.927;AC=12;AF=0.214;AN=56;BaseQRankSum=6.406;DP=354;FS=24.352;HRun=0;HaplotypeScore=112.9301;InbreedingCoeff=-0.2702;MQ=50.71;MQ0=8;MQRankSum=-6.391;QD=3.17;ReadPosRankSum=-1.252;VQSLOD=1.0894;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:14,0:13:8.40:8,0,275	0/0:8,0:8:24.08:0,24,333	0/0:31,0:5:15.04:0,15,190	0/0:39,0:12:19.05:0,19,233	0/1:7,5:12:97.46:97,0,259	0/0:13,0:13:39.09:0,39,483	0/0:9,0:9:27.06:0,27,331	0/0:12,0:10:24.05:0,24,314	0/0:10,0:10:30.09:0,30,404	0/1:12,1:13:21.63:22,0,378	0/1:6,2:7:55.82:56,0,187	0/0:10,0:10:29.83:0,30,389	0/1:21,0:20:99:105,0,528	0/1:8,0:8:16.05:16,0,268	0/1:11,3:14:74.37:74,0,323	0/0:12,0:12:36.12:0,36,503	0/1:18,1:19:24.55:25,0,539	0/0:8,1:9:13.58:0,14,164	0/0:4,0:4:12.04:0,12,167	0/0:9,0:9:27.08:0,27,348	0/1:10,0:11:62.09:181,0,62	0/1:9,0:9:12.90:13,0,274	0/1:13,0:13:5.14:5,0,391	0/1:9,0:9:23.90:24,0,153	0/0:8,0:8:24.06:0,24,293	0/0:13,0:13:39.12:0,39,516	0/0:14,0:14:42.12:0,42,554	0/0:2,0:2:6.02:0,6,84
chr10	6761608	.	AG	A	1648.07	PASS	AB=0.971;AC=29;AF=0.518;AN=56;BaseQRankSum=-1.250;DP=249;FS=5.332;HRun=6;HaplotypeScore=37.5293;InbreedingCoeff=0.7569;MQ=65.92;MQ0=9;MQRankSum=-0.085;QD=13.85;ReadPosRankSum=0.931;VQSLOD=1.9273;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:14:33.07:0,33,393	1/1:1,1:2:3.01:32,3,0	0/1:32,1:6:30.25:30,0,62	0/0:37,0:14:4.98:0,5,88	1/1:1,8:9:17.98:179,18,0	0/0:15,0:14:38.80:0,39,296	0/0:4,0:4:5.98:0,6,46	1/1:5,5:10:12:117,12,0	0/0:6,0:6:14.94:0,15,117	1/1:1,5:6:15.04:161,15,0	1/1:1,1:2:6.01:59,6,0	1/1:0,7:7:21.04:218,21,0	1/1:1,5:6:9.02:96,9,0	1/1:3,1:4:6.01:63,6,0	1/1:0,4:4:12.03:129,12,0	0/0:8,0:8:17.12:0,17,133	0/0:8,0:8:7.12:0,7,67	1/1:1,4:5:6.02:64,6,0	0/0:6,0:5:14.92:0,15,118	0/0:6,0:6:14.93:0,15,125	1/1:1,8:9:17.83:193,18,0	1/1:0,5:5:15.04:161,15,0	1/1:2,9:11:18.04:193,18,0	1/1:0,6:6:15.04:161,15,0	0/0:11,0:11:26.74:0,27,188	0/0:7,0:7:21.06:0,21,263	0/0:6,0:6:15.05:0,15,197	0/0:1,0:1:3.01:0,3,39
chr10	6761942	.	CA	C	10429.62	PASS	AB=0.893;AC=29;AF=0.518;AN=56;BaseQRankSum=19.013;DP=641;FS=2.502;HRun=1;HaplotypeScore=108.2356;InbreedingCoeff=0.9235;MQ=79.70;MQ0=0;MQRankSum=-0.028;QD=30.23;ReadPosRankSum=1.015;VQSLOD=4.6893;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,138,2169	1/1:0,7:7:11.52:148,12,0	0/0:22,0:22:60.16:0,60,902	0/0:10,0:10:24.96:0,25,351	1/1:2,18:20:47.82:547,48,0	0/0:28,0:28:84.29:0,84,1325	0/0:16,0:16:48.12:0,48,716	1/1:3,23:26:68.87:847,69,0	0/0:27,0:27:81.25:0,81,1247	1/1:0,18:18:51.16:638,51,0	1/1:2,8:10:28.32:320,28,0	1/1:0,27:27:81.25:998,81,0	1/1:3,22:25:65.55:814,66,0	1/1:1,29:30:80.08:1009,80,0	1/1:0,31:31:90.28:1110,90,0	0/0:23,0:23:69.23:0,69,1092	0/0:31,0:31:93.32:0,93,1457	1/1:0,15:15:39.12:482,39,0	0/0:22,0:22:66.21:0,66,1003	0/0:15,0:15:45.15:0,45,712	1/1:1,42:43:99:1350,109,0	1/1:1,14:15:34.36:451,34,0	1/1:1,14:15:32.61:470,33,0	1/1:0,38:38:99:1222,99,0	0/0:15,0:15:45.15:0,45,719	0/1:22,3:25:26.93:27,0,916	0/0:24,0:23:72.23:0,72,1112	0/0:16,0:16:48.10:0,48,690
chr10	6762604	.	CT	C	679.53	PASS	AB=0.933;AC=3;AF=0.054;AN=56;BaseQRankSum=7.806;DP=664;FS=0.683;HRun=8;HaplotypeScore=62.5279;InbreedingCoeff=0.6387;MQ=73.02;MQ0=0;MQRankSum=-0.011;QD=15.80;ReadPosRankSum=-0.813;VQSLOD=3.4652;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,27:29:78.12:753,78,0	0/0:17,0:17:48.15:0,48,579	0/1:12,1:12:32.38:32,0,104	0/0:10,0:10:15.02:0,15,158	0/0:44,0:44:99:0,117,1412	0/0:32,0:32:93.29:0,93,1123	0/0:9,0:9:27.07:0,27,315	0/0:34,0:34:87.27:0,87,1050	0/0:21,0:21:54.17:0,54,652	0/0:39,0:39:99:0,111,1341	0/0:31,0:31:87.27:0,87,1051	0/0:18,0:18:54.16:0,54,641	0/0:23,0:23:66.20:0,66,794	0/0:20,0:20:60.18:0,60,725	0/0:17,1:18:22.17:0,22,539	0/0:17,0:17:45.14:0,45,544	0/0:26,0:26:69.16:0,69,805	0/0:17,0:17:48.15:0,48,580	0/0:24,0:24:60.18:0,60,723	0/0:27,0:27:78.24:0,78,942	0/0:18,0:18:51.16:0,51,614	0/0:25,0:25:69.21:0,69,834	0/0:26,0:26:69.21:0,69,832	0/0:18,0:18:51.16:0,51,616	0/0:26,0:26:66.20:0,66,797	0/0:30,0:30:80.33:0,80,986	0/0:35,0:35:96.29:0,96,1159	0/0:16,0:16:45.14:0,45,544
chr10	6763881	.	GTCTTGAT	G	10459.69	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=16.418;DP=746;FS=8.226;HRun=0;HaplotypeScore=159.1949;InbreedingCoeff=0.9995;MQ=51.39;MQ0=23;MQRankSum=-15.745;QD=60.46;ReadPosRankSum=1.014;VQSLOD=4.7325;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,135,5278	0/0:8,0:8:24.08:0,24,910	0/0:30,0:11:33.11:0,33,1130	0/0:41,0:20:57.20:0,57,2241	0/0:34,0:34:99:0,99,3725	1/1:0,19:19:51.18:1336,51,0	1/1:1,18:19:33.11:885,33,0	0/0:40,0:33:90.29:0,90,3421	1/1:0,18:18:48.16:1288,48,0	0/0:35,0:35:99:0,105,4025	0/0:26,0:26:75.26:0,75,2990	0/0:22,0:22:63.22:0,63,2314	0/0:12,0:12:36.12:0,36,1403	0/0:23,0:23:69.22:0,69,2649	0/0:25,0:25:75.24:0,75,2932	1/1:1,23:24:51.18:1368,51,0	1/1:0,17:17:42.14:1103,42,0	0/0:29,0:29:87.30:0,87,3394	1/1:4,13:14:36.07:797,36,0	1/1:0,39:39:99:2455,105,0	0/0:37,0:36:99:0,108,4396	0/0:29,0:29:87.30:0,87,3333	0/0:28,0:28:78.27:0,78,2837	0/0:27,0:27:78.25:0,78,2974	1/1:1,19:19:48.12:1227,48,0	0/0:33,0:33:96.32:0,96,3642	0/0:37,0:37:99:0,111,4423	0/0:11,0:11:33.11:0,33,1324
chr10	6766133	.	GTAGA	G	3160.11	PASS	AB=0.930;AC=42;AF=0.875;AN=48;BaseQRankSum=1.347;DP=606;FS=11.322;HRun=0;HaplotypeScore=120.6005;InbreedingCoeff=-0.0585;MQ=71.79;MQ0=9;MQRankSum=0.834;QD=6.17;ReadPosRankSum=-0.120;VQSLOD=1.3148;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:20,10:31:11.77:147,12,0	1/1:3,2:5:9.02:115,9,0	./.	./.	1/1:13,8:21:14.96:175,15,0	1/1:9,0:10:3:27,3,0	0/1:23,0:23:0.06:0,0,0	./.	1/1:18,0:31:14.80:120,15,0	1/1:21,4:25:27.05:320,27,0	1/1:15,2:18:23.75:245,24,0	1/1:15,0:20:7.90:78,8,0	1/1:13,0:26:8.67:107,9,0	1/1:11,0:17:9.02:97,9,0	1/1:16,11:27:20.85:315,21,0	1/1:17,3:20:21:249,21,0	./.	1/1:10,2:13:8.96:109,9,0	1/1:9,0:14:6.01:56,6,0	1/1:19,0:22:5.88:36,6,0	0/1:30,7:37:39.05:336,0,39	1/1:19,0:22:26.71:192,27,0	1/1:24,0:26:8.77:51,9,0	0/1:13,0:20:10.24:10,0,37	1/1:17,1:18:15:162,15,0	0/1:26,0:26:29.07:103,0,29	0/1:30,0:30:43.95:209,0,44	0/1:9,0:9:16.99:22,0,17
chr10	6766194	.	TAGAC	T	1705.49	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=6.414;DP=553;FS=3.158;HRun=0;HaplotypeScore=155.2182;InbreedingCoeff=0.0271;MQ=54.21;MQ0=10;MQRankSum=0.464;QD=5.88;ReadPosRankSum=-1.450;VQSLOD=2.4697;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:21,0:21:54.24:54,0,72	0/1:14,0:14:7.44:7,0,172	0/0:17,0:8:14.13:0,14,145	0/0:15,0:9:20.04:0,20,184	0/1:25,0:25:25.83:26,0,216	0/0:9,0:9:0.76:0,1,41	0/0:19,0:19:43.92:0,44,341	0/0:36,0:33:86.92:0,87,754	0/1:22,0:22:2.39:2,0,151	0/1:18,0:18:24.03:24,0,193	0/1:16,0:16:52.23:52,0,87	0/0:24,0:24:12.56:0,13,245	0/0:22,0:22:3.63:0,4,175	0/0:18,0:17:19.27:0,19,196	0/1:30,0:30:67.13:67,0,359	0/1:21,0:21:31.95:32,0,242	0/0:8,0:8:8.58:0,9,58	0/1:12,0:11:8.63:9,0,156	0/0:16,0:15:16.80:0,17,200	0/0:18,0:18:33.06:0,33,236	0/1:32,0:30:77.81:78,0,321	0/0:25,0:25:18.12:0,18,203	0/0:19,0:18:9.36:0,9,210	0/0:16,0:16:7.11:0,7,66	0/1:14,0:14:11.55:12,0,146	1/1:7,17:24:59.75:575,60,0	1/1:27,7:34:72.68:833,73,0	1/1:5,2:7:9:101,9,0
chr10	6766210	.	ATGTG	A	2600.68	PASS	AB=0.836;AC=32;AF=0.615;AN=52;BaseQRankSum=-3.300;DP=566;FS=2.457;HRun=0;HaplotypeScore=158.1000;InbreedingCoeff=0.6248;MQ=52.48;MQ0=16;MQRankSum=-0.566;QD=7.24;ReadPosRankSum=-1.173;VQSLOD=2.5440;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:15:0.80:2,1,0	1/1:10,3:14:12.03:167,12,0	./.	./.	1/1:20,2:22:4.37:49,4,0	0/0:7,0:14:3.01:0,3,55	0/0:18,0:20:14.52:0,15,251	0/0:34,0:34:0.89:0,1,2	0/0:18,1:18:20.85:0,21,343	1/1:15,5:18:9.03:140,9,0	1/1:10,4:14:3.23:47,3,0	1/1:18,10:28:24.08:372,24,0	1/1:18,2:20:8.75:117,9,0	1/1:17,4:20:12.33:164,12,0	1/1:25,4:30:25.84:289,26,0	0/0:14,0:19:26.87:0,27,341	0/0:5,0:6:6.02:0,6,118	1/1:12,1:15:2.55:148,3,0	0/0:15,0:14:9.03:0,9,183	0/0:14,0:26:19.58:0,20,351	1/1:29,7:35:9.03:140,9,0	1/1:12,10:22:16.41:236,16,0	1/1:11,9:20:28.43:398,28,0	0/1:12,4:16:0.55:128,0,1	0/0:13,0:13:6.49:0,6,142	0/1:24,1:25:20.58:21,0,109	1/1:21,8:31:17.75:241,18,0	1/1:2,3:6:9.02:119,9,0
chr10	6766619	.	GA	G	445.81	PASS	AB=0.814;AC=7;AF=0.125;AN=56;BaseQRankSum=-0.808;DP=496;FS=3.553;HRun=15;HaplotypeScore=76.8090;InbreedingCoeff=0.5390;MQ=69.55;MQ0=2;MQRankSum=2.065;QD=4.69;ReadPosRankSum=3.832;VQSLOD=2.0483;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:20:7.04:0,7,32	0/0:8,0:9:16.34:0,16,100	0/0:13,0:10:11.40:0,11,94	0/1:14,0:11:6.57:7,0,9	0/0:24,0:25:34.06:0,34,152	0/0:23,3:28:19.47:0,19,416	0/0:16,3:20:13.57:0,14,232	0/0:29,0:30:61.66:0,62,345	0/0:13,0:13:28.50:0,28,230	0/0:19,0:19:40.62:0,41,247	0/0:16,0:16:30.94:0,31,151	0/0:11,0:11:8.48:0,8,41	0/0:16,0:17:23.08:0,23,128	0/0:13,0:15:34.17:0,34,174	0/0:12,0:12:15.81:0,16,82	0/0:19,1:20:22.71:0,23,320	0/1:16,2:21:15.77:16,0,200	0/0:13,0:13:14.23:0,14,74	0/0:26,2:30:14.44:0,14,380	0/0:20,1:22:22.56:0,23,305	0/0:9,0:9:17.31:0,17,98	0/0:20,0:20:28.59:0,29,153	0/0:12,0:12:8.59:0,9,44	0/0:10,0:10:11.36:0,11,56	0/0:14,2:16:13.72:0,14,239	1/1:3,9:13:25.60:158,26,0	1/1:13,15:30:27.80:293,28,0	0/1:9,7:16:2.92:111,0,3
chr10	6766632	.	A	AAAAC	6316.94	PASS	AB=0.800;AC=28;AF=0.500;AN=56;BaseQRankSum=-0.908;DP=509;FS=1.314;HRun=0;HaplotypeScore=99.8441;InbreedingCoeff=0.7545;MQ=67.49;MQ0=1;MQRankSum=-1.019;QD=25.17;ReadPosRankSum=-3.213;VQSLOD=4.1924;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:2.82:0,3,107	0/1:3,0:9:73.75:166,0,74	0/0:13,0:10:2.30:0,2,111	0/1:9,0:7:3.66:4,0,39	1/1:7,14:24:42.38:619,42,0	0/0:28,0:28:74.95:0,75,955	0/0:17,0:17:10.77:0,11,419	1/1:7,15:33:89.91:1296,90,0	0/0:14,0:14:11.40:0,11,321	1/1:5,10:22:60.04:894,60,0	1/1:3,13:20:39.37:555,39,0	1/1:0,9:11:9.03:209,9,0	1/1:4,15:24:21.07:422,21,0	1/1:6,10:19:33.82:578,34,0	1/1:2,1:13:14.99:194,15,0	0/0:20,0:20:57.13:0,57,741	0/0:18,0:18:47.22:0,47,623	1/1:3,8:14:18.06:406,18,0	0/0:28,0:28:43.49:0,43,727	0/0:23,0:23:47.69:0,48,597	1/1:3,1:13:1.38:175,1,0	1/1:5,13:20:18.99:518,19,0	1/1:1,7:9:5.50:75,6,0	1/1:1,6:11:12.02:206,12,0	0/0:18,0:18:41.52:0,42,537	0/0:14,0:14:34.29:0,34,343	0/0:27,0:27:72.05:0,72,765	0/0:17,0:17:32.92:0,33,354
chr10	6766850	.	G	GTTT	3796.84	PASS	AB=0.756;AC=29;AF=0.518;AN=56;BaseQRankSum=2.347;DP=493;FS=8.317;HRun=12;HaplotypeScore=84.6622;InbreedingCoeff=0.7288;MQ=66.51;MQ0=1;MQRankSum=-1.403;QD=13.96;ReadPosRankSum=-2.120;VQSLOD=1.1310;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:31:68.82:0,69,410	1/1:2,3:5:8.98:129,9,0	0/0:8,0:9:12.65:0,13,138	0/0:8,0:7:7.13:0,7,68	1/1:4,14:22:47.53:704,48,0	0/0:23,0:23:41.89:0,42,457	0/0:11,0:13:2.86:0,3,229	1/1:13,11:26:35.93:437,36,0	0/0:21,0:21:53.99:0,54,593	1/1:9,7:18:24.07:388,24,0	1/1:4,6:10:14.95:204,15,0	1/1:3,0:21:32.03:236,32,0	1/1:1,0:8:11.93:89,12,0	1/1:5,1:18:27.65:246,28,0	1/1:4,21:25:26.88:457,27,0	0/0:17,0:17:29.83:0,30,306	0/0:21,0:23:55.54:0,56,614	1/1:2,4:7:12.04:208,12,0	0/1:27,0:32:11.99:12,0,512	0/0:16,0:16:29.85:0,30,317	1/1:3,6:9:6.02:110,6,0	1/1:6,0:16:20.77:156,21,0	0/1:3,1:10:11.13:93,0,11	1/1:4,0:21:41.81:318,42,0	0/0:15,0:15:24.41:0,24,271	0/1:17,0:22:8.76:9,0,295	0/0:24,0:24:63.15:0,63,700	0/0:18,0:20:48.11:0,48,566
chr10	6767474	.	T	TG	28560.93	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-9.991;DP=705;FS=7.704;HRun=0;HaplotypeScore=64.5667;InbreedingCoeff=0.9999;MQ=87.85;MQ0=1;MQRankSum=-11.497;QD=44.01;ReadPosRankSum=6.629;VQSLOD=4.5384;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,54:54:99:2302,144,0	1/1:0,15:15:42.14:671,42,0	0/0:28,0:28:74.84:0,75,984	0/0:28,0:26:55.40:0,55,866	1/1:1,24:25:63.21:1007,63,0	1/1:0,21:21:63.21:1007,63,0	1/1:0,28:28:78.27:1247,78,0	1/1:3,25:28:78.27:1243,78,0	1/1:0,28:28:75.26:1199,75,0	1/1:1,24:25:72.25:1150,72,0	1/1:2,15:16:39.13:611,39,0	1/1:0,27:27:75.26:1199,75,0	1/1:0,20:20:51.17:815,51,0	1/1:0,29:29:84.29:1343,84,0	1/1:0,22:22:63.21:1007,63,0	1/1:1,34:35:99:1583,99,0	1/1:0,19:19:48.63:768,49,0	1/1:0,29:29:78.27:1247,78,0	1/1:0,19:19:57.19:908,57,0	1/1:0,19:19:51.17:815,51,0	1/1:0,48:47:99:2254,141,0	1/1:0,15:15:42.14:671,42,0	1/1:0,19:19:54.05:862,54,0	1/1:1,26:27:68.91:1103,69,0	1/1:0,23:23:63.21:1007,63,0	1/1:1,22:23:66.22:1055,66,0	1/1:0,18:18:45.15:719,45,0	1/1:0,16:16:48.16:767,48,0
chr10	6769084	.	AGG	A	2615.61	PASS	AB=0.793;AC=16;AF=0.296;AN=54;BaseQRankSum=2.754;DP=430;FS=1.768;HRun=11;HaplotypeScore=58.8110;InbreedingCoeff=0.6850;MQ=69.02;MQ0=3;MQRankSum=1.286;QD=16.05;ReadPosRankSum=7.229;VQSLOD=1.4330;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:57.14:0,57,809	0/0:6,0:6:8.99:0,9,111	0/1:24,0:14:6.52:7,0,137	0/0:14,0:14:0.65:0,1,240	0/0:6,0:7:14.23:0,14,150	1/1:2,15:17:4.21:406,4,0	1/1:9,18:27:42.05:447,42,0	0/0:17,0:17:30.08:0,30,421	0/1:5,12:16:7.12:315,0,7	0/0:12,0:12:16.19:0,16,228	0/0:7,0:7:12.04:0,12,168	0/0:3,0:9:5.97:0,6,64	0/0:8,0:14:16.86:0,17,195	0/0:8,0:15:6.01:0,6,57	0/0:10,0:10:21.06:0,21,302	1/1:1,10:11:24.06:255,24,0	1/1:4,29:33:66.14:702,66,0	0/0:20,0:21:32.47:0,32,460	1/1:6,10:15:27.05:287,27,0	1/1:3,7:10:19.28:192,19,0	0/0:27,0:27:38.57:0,39,528	./.	0/0:1,0:4:0:0,0,0	0/0:5,0:15:6.01:0,6,73	1/1:1,7:8:18.02:187,18,0	0/0:12,0:12:12.04:0,12,184	0/0:14,0:14:27.09:0,27,371	0/0:7,0:15:9.02:0,9,103
chr10	6769265	.	TAA	T	2982.56	PASS	AB=0.929;AC=37;AF=0.661;AN=56;BaseQRankSum=0.776;DP=388;FS=6.933;HRun=14;HaplotypeScore=58.0726;InbreedingCoeff=0.8126;MQ=59.72;MQ0=26;MQRankSum=0.368;QD=11.61;ReadPosRankSum=4.461;VQSLOD=2.0589;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,28:31:60.01:551,60,0	0/0:1,0:6:7.36:0,7,25	0/0:9,0:6:15.51:0,16,182	0/0:5,0:3:7.83:0,8,75	0/0:5,0:12:20.48:0,20,102	1/1:2,0:19:46.65:203,47,0	1/1:1,0:7:16.46:72,16,0	0/0:22,0:44:24.80:0,25,246	1/1:4,0:8:8.21:36,8,0	1/1:1,19:20:56.78:502,57,0	1/1:7,11:17:32.23:284,32,0	1/1:0,8:9:14.88:186,15,0	1/1:0,6:7:2.86:75,3,0	1/1:0,9:9:21.02:194,21,0	0/0:4,0:8:9.98:0,10,35	1/1:1,0:5:13.72:60,14,0	1/1:6,0:25:49.33:214,49,0	1/1:9,15:18:29.88:268,30,0	1/1:5,0:13:27.36:119,27,0	1/1:1,0:13:30.18:131,30,0	0/0:3,0:6:4.99:0,5,17	1/1:0,1:1:3:28,3,0	1/1:3,2:5:5.68:55,6,0	1/1:3,5:8:11.75:111,12,0	1/1:2,0:11:21.95:96,22,0	0/1:7,1:11:0.77:1,0,178	0/0:5,0:16:23.88:0,24,207	0/0:2,0:14:36.04:0,36,336
chr10	6770324	.	T	TTG	4547.34	PASS	AB=1.000;AC=29;AF=0.558;AN=52;BaseQRankSum=15.193;DP=457;FS=1.219;HRun=0;HaplotypeScore=242.2716;InbreedingCoeff=0.8815;MQ=94.58;MQ0=0;MQRankSum=-15.779;QD=26.44;ReadPosRankSum=3.454;VQSLOD=5.1435;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,138,2081	1/1:5,0:5:7.20:103,7,0	0/0:31,0:30:87.29:0,87,1307	0/0:23,0:23:68.90:0,69,1007	1/1:8,0:8:1.19:227,1,0	0/0:17,0:17:48.15:0,48,711	0/0:31,0:31:87.30:0,87,1326	1/1:9,0:9:26.42:307,26,0	0/0:26,0:26:78.26:0,78,1195	1/1:15,0:15:26.53:354,27,0	1/1:8,0:9:20.59:258,21,0	1/1:16,0:16:37.12:495,37,0	1/1:10,0:10:21.97:302,22,0	1/1:14,0:15:41.95:431,42,0	1/1:9,0:9:24.65:275,25,0	0/0:25,0:25:72.23:0,72,1078	0/0:17,0:17:51.16:0,51,759	1/1:4,2:6:6.62:39,7,0	0/0:23,0:23:63.19:0,63,921	0/0:17,0:17:48.16:0,48,727	1/1:10,0:10:17.42:228,17,0	0/1:14,0:14:3.60:226,0,4	1/1:13,0:13:17.35:307,17,0	./.	0/0:24,0:24:72.24:0,72,1103	1/1:15,0:15:35.76:392,36,0	1/1:16,2:18:48.22:604,48,0	./.
chr10	6772184	.	A	ACC	8196.40	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=7.500;DP=457;FS=16.793;HRun=0;HaplotypeScore=137.5964;InbreedingCoeff=0.9871;MQ=47.59;MQ0=0;MQRankSum=-10.103;QD=39.79;ReadPosRankSum=-0.924;VQSLOD=4.8742;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:60.05:0,60,534	1/1:0,5:5:15.05:254,15,0	0/0:15,0:10:30.10:0,30,466	0/0:9,0:7:18.01:0,18,230	1/1:5,9:14:26.29:535,26,0	0/0:17,0:17:51.14:0,51,742	0/0:13,0:13:39.08:0,39,543	1/1:8,19:25:68.19:1083,68,0	0/0:20,0:20:60.19:0,60,929	1/1:11,13:24:66.04:932,66,0	1/1:3,8:11:15.87:370,16,0	1/1:5,12:17:48.08:716,48,0	1/1:2,18:21:63.21:1043,63,0	1/1:4,12:16:38.63:629,39,0	1/1:5,19:24:59.73:1023,60,0	0/0:18,0:18:51.12:0,51,788	0/0:25,0:25:75.20:0,75,1134	1/1:1,6:7:21.02:325,21,0	0/0:14,0:14:42.14:0,42,643	0/0:22,0:21:57.18:0,57,866	1/1:3,6:9:20.08:239,20,0	1/1:3,5:8:18.06:290,18,0	1/1:4,10:14:38.53:557,39,0	1/1:4,5:9:13.71:202,14,0	0/0:33,0:33:99:0,99,1564	0/0:21,0:21:62.34:0,62,581	0/0:17,0:17:47.63:0,48,408	0/0:6,0:6:14.83:0,15,114
chr10	6772186	.	C	CT	5661.21	PASS	AB=1.000;AC=50;AF=0.893;AN=56;BaseQRankSum=6.351;DP=489;FS=29.238;HRun=4;HaplotypeScore=161.9885;InbreedingCoeff=0.4988;MQ=49.14;MQ0=0;MQRankSum=-6.669;QD=12.17;ReadPosRankSum=-2.561;VQSLOD=1.4549;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,18:22:50.24:589,50,0	1/1:5,0:5:14.20:71,14,0	0/0:15,0:12:26.11:0,26,276	0/0:9,0:7:14.98:0,15,139	1/1:16,0:16:32.20:201,32,0	1/1:18,0:18:10.69:123,11,0	1/1:11,0:11:3.27:28,3,0	1/1:36,1:35:74.97:405,75,0	1/1:22,0:22:1:26,1,0	1/1:27,0:27:66.93:395,67,0	1/1:11,0:11:21.09:130,21,0	1/1:18,0:18:45.02:244,45,0	1/1:24,0:24:62.19:329,62,0	1/1:17,0:17:40.60:272,41,0	1/1:26,0:26:60.24:360,60,0	1/1:19,0:19:11.74:57,12,0	1/1:24,0:24:10.79:104,11,0	1/1:8,0:8:20.26:127,20,0	1/1:13,0:13:14.59:74,15,0	0/1:22,0:21:15.14:60,0,15	1/1:10,0:10:23.71:137,24,0	1/1:10,0:10:26.11:156,26,0	1/1:14,1:15:37.44:219,37,0	1/1:12,0:12:22.08:126,22,0	0/1:32,0:32:17.30:17,0,38	1/1:10,12:22:54.07:661,54,0	1/1:7,11:18:48.05:559,48,0	1/1:0,6:6:15.04:189,15,0
chr10	6772202	.	A	ACTGT	20570.73	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=5.282;DP=513;FS=7.095;HRun=0;HaplotypeScore=140.0711;InbreedingCoeff=0.9893;MQ=59.57;MQ0=1;MQRankSum=-15.193;QD=63.29;ReadPosRankSum=-0.936;VQSLOD=6.0487;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,17:25:51.18:1352,51,0	1/1:1,6:7:18.06:491,18,0	0/0:18,0:17:48.11:0,48,785	0/0:8,0:8:21.04:0,21,365	1/1:3,16:20:48.16:1302,48,0	0/0:16,0:16:48.13:0,48,862	0/0:11,0:11:33.11:0,33,626	1/1:10,29:38:99:2922,111,0	0/0:25,0:25:72.22:0,72,1329	1/1:1,20:22:66.20:1745,66,0	1/1:3,8:12:27.09:718,27,0	1/1:11,15:27:63.17:1617,63,0	1/1:3,22:26:72.25:1929,72,0	1/1:6,8:15:36.12:961,36,0	1/1:4,20:25:60.21:1628,60,0	0/0:18,0:18:51.17:0,51,980	0/0:23,0:23:69.18:0,69,1252	1/1:5,7:12:14.81:408,15,0	0/0:15,0:15:39.13:0,39,712	0/0:22,0:22:66.21:0,66,1241	1/1:4,11:15:24.08:655,24,0	1/1:1,10:12:30.10:815,30,0	1/1:3,14:18:42:1106,42,0	1/1:4,9:13:18.06:487,18,0	0/0:31,0:31:90.24:0,90,1691	1/1:3,12:15:39.13:1043,39,0	1/1:2,12:15:39.13:1062,39,0	1/1:1,5:6:12.04:328,12,0
chr10	6772970	.	CTTT	C	4215.27	PASS	AB=0.635;AC=27;AF=0.482;AN=56;BaseQRankSum=0.094;DP=569;FS=0.460;HRun=16;HaplotypeScore=110.8363;InbreedingCoeff=0.7700;MQ=78.48;MQ0=5;MQRankSum=-0.077;QD=14.34;ReadPosRankSum=7.432;VQSLOD=2.8632;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,17:31:29.09:388,29,0	1/1:0,6:6:15.04:161,15,0	0/0:39,0:18:16.89:0,17,136	0/0:49,0:29:11.84:0,12,184	1/1:3,16:21:41:420,41,0	0/0:7,0:22:30.06:0,30,411	0/0:5,0:14:17.98:0,18,221	1/1:15,14:33:33.91:458,34,0	0/0:2,0:6:3.01:0,3,43	1/1:8,9:19:28.21:305,28,0	1/1:10,11:24:32.66:366,33,0	1/1:11,7:19:10.06:126,10,0	0/1:8,6:15:18.68:182,0,19	1/1:10,8:19:26.81:274,27,0	1/1:12,11:23:29.68:321,30,0	0/0:6,0:15:12.04:0,12,201	0/0:6,0:21:21.07:0,21,309	1/1:9,14:27:32.09:359,32,0	0/0:13,0:21:51.16:0,51,743	0/0:14,0:19:45.07:0,45,627	0/1:7,11:19:1.34:187,0,1	0/1:4,5:11:24.96:139,0,25	1/1:6,10:16:18.47:222,18,0	1/1:1,9:11:29.94:308,30,0	0/0:3,0:14:24.08:0,24,362	0/0:16,0:16:36.05:0,36,477	0/0:19,0:21:48.04:0,48,641	0/0:11,0:12:18.04:0,18,281
chr10	6776357	.	TCAA	T	7224.56	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=14.754;DP=687;FS=14.087;HRun=0;HaplotypeScore=95.3263;InbreedingCoeff=0.9998;MQ=91.51;MQ0=0;MQRankSum=-5.324;QD=40.36;ReadPosRankSum=2.200;VQSLOD=5.3601;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:96.33:0,96,2073	0/0:11,0:11:27.09:0,27,596	0/0:31,0:31:78.27:0,78,1681	0/0:27,0:27:78.27:0,78,1599	0/0:21,0:21:63.22:0,63,1351	1/1:1,21:22:54.18:868,54,0	1/1:1,26:27:69.24:1108,69,0	0/0:41,0:41:99:0,117,2540	1/1:1,24:25:63.21:1011,63,0	0/0:25,0:25:72.25:0,72,1567	0/0:21,0:21:63.21:0,63,1351	0/0:25,0:25:69.24:0,69,1522	0/0:31,0:31:81.25:0,81,1693	0/0:19,0:19:57.20:0,57,1238	0/0:24,0:24:72.25:0,72,1565	1/1:1,25:26:72.25:1157,72,0	1/1:0,24:24:57.19:915,57,0	0/0:27,0:27:78.27:0,78,1717	1/1:4,13:17:39.13:624,39,0	1/1:2,13:15:36.12:578,36,0	0/0:29,0:29:81.28:0,81,1766	0/0:23,0:23:66.23:0,66,1432	0/0:24,0:24:69.24:0,69,1501	0/0:26,0:26:75.09:0,75,1557	1/1:1,22:23:60.20:963,60,0	0/0:22,0:22:63.21:0,63,1336	0/0:33,0:32:93.32:0,93,2027	0/0:15,0:15:39.13:0,39,861
chr10	6779870	.	TCA	T	6255.58	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=8.759;DP=557;FS=0.000;HRun=0;HaplotypeScore=100.8314;InbreedingCoeff=0.9947;MQ=73.12;MQ0=0;MQRankSum=-4.973;QD=42.55;ReadPosRankSum=1.486;VQSLOD=6.5257;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:90.27:0,90,1602	0/0:7,0:7:21.07:0,21,392	0/0:12,0:13:33.04:0,33,493	0/0:9,0:9:13.60:0,14,229	0/0:26,0:26:72.25:0,72,1330	1/1:0,24:24:66.22:971,66,0	1/1:5,17:22:66.22:968,66,0	0/0:36,0:36:93.31:0,93,1709	1/1:2,16:18:54.18:790,54,0	0/0:32,0:32:90.22:0,90,1645	0/0:17,0:17:51.17:0,51,946	0/0:17,0:17:42.14:0,42,785	0/0:25,0:25:72.23:0,72,1306	0/0:16,0:16:48.16:0,48,898	0/0:22,0:22:57.20:0,57,1067	1/1:0,17:17:48.16:706,48,0	1/1:1,23:24:69.23:1013,69,0	0/0:23,0:23:51.17:0,51,952	1/1:1,12:13:36.12:529,36,0	1/1:3,8:11:33.11:484,33,0	0/0:12,0:12:30.10:0,30,561	0/0:11,0:11:33.11:0,33,611	0/0:20,0:20:57.20:0,57,1054	0/0:23,0:23:63.19:0,63,1145	1/1:5,13:18:54.18:794,54,0	0/0:22,0:22:66.23:0,66,1236	0/0:32,0:32:87.30:0,87,1610	0/0:11,0:11:21.07:0,21,393
chr10	6779878	.	AT	A	9497.90	PASS	AB=0.875;AC=53;AF=0.946;AN=56;BaseQRankSum=-2.975;DP=563;FS=6.489;HRun=12;HaplotypeScore=82.2827;InbreedingCoeff=0.6801;MQ=68.60;MQ0=0;MQRankSum=-4.220;QD=17.21;ReadPosRankSum=3.387;VQSLOD=5.8955;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,31:37:44.25:527,44,0	1/1:1,7:8:14.57:116,15,0	0/0:11,0:10:11.75:0,12,98	0/1:6,1:7:6.76:7,0,77	1/1:3,19:22:53.71:409,54,0	1/1:7,19:26:62.72:485,63,0	1/1:4,20:24:56.76:440,57,0	1/1:8,23:31:68.65:532,69,0	1/1:2,18:20:53.77:414,54,0	1/1:8,24:32:71.64:552,72,0	1/1:4,10:15:31.85:233,32,0	1/1:2,16:18:38.84:302,39,0	1/1:4,22:26:62.75:488,63,0	1/1:3,14:17:38.84:302,39,0	1/1:4,17:21:44.81:348,45,0	1/1:7,11:18:38.81:299,39,0	1/1:0,25:25:68.74:533,69,0	1/1:2,22:24:50.72:395,51,0	1/1:4,9:13:29.88:232,30,0	1/1:1,11:12:32.82:250,33,0	1/1:2,10:12:17.67:139,18,0	1/1:1,10:11:29.88:232,30,0	1/1:2,19:21:50.80:395,51,0	1/1:2,23:25:59.77:464,60,0	1/1:2,17:19:41.83:325,42,0	1/1:7,17:24:20.31:341,20,0	1/1:4,29:33:74.68:578,75,0	1/1:0,11:11:20.92:163,21,0
chr10	6780096	.	T	TG	16661.63	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-11.852;DP=784;FS=0.876;HRun=4;HaplotypeScore=74.7224;InbreedingCoeff=0.9976;MQ=86.14;MQ0=0;MQRankSum=-2.388;QD=35.83;ReadPosRankSum=1.822;VQSLOD=5.3203;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,99,1122	1/1:1,11:12:30.10:409,30,0	0/0:30,0:30:87.22:0,87,971	0/0:22,0:22:53.49:0,53,575	1/1:2,19:21:54.18:733,54,0	0/0:16,0:16:48.14:0,48,544	0/0:40,0:40:99:0,102,1136	1/1:6,25:31:78.19:1013,78,0	0/0:36,0:36:99:0,105,1178	1/1:1,27:28:78.26:1066,78,0	1/1:2,14:16:42.14:574,42,0	1/1:1,32:33:93.31:1272,93,0	1/1:5,24:29:44.42:991,44,0	1/1:3,27:30:75.25:1025,75,0	1/1:1,27:28:78.26:1067,78,0	0/0:27,0:27:75.21:0,75,851	0/0:39,0:39:99:0,111,1250	1/1:2,22:24:63.21:862,63,0	0/0:26,0:26:75.21:0,75,850	0/0:27,0:27:69.18:0,69,770	1/1:4,68:72:99:2501,184,0	1/1:4,18:22:57.18:762,57,0	1/1:0,15:15:45.15:614,45,0	1/1:2,36:38:99:1436,105,0	0/0:20,0:20:54.15:0,54,611	1/1:0,25:26:75.25:1022,75,0	1/1:1,30:31:81.27:1108,81,0	1/1:4,5:9:15.05:205,15,0
chr10	6781588	.	AAAAACAAAAAAC	A	3490.60	PASS	AB=1.000;AC=10;AF=0.179;AN=56;BaseQRankSum=-5.720;DP=595;FS=0.000;HRun=0;HaplotypeScore=242.0612;InbreedingCoeff=0.4840;MQ=53.33;MQ0=11;MQRankSum=-0.817;QD=22.09;ReadPosRankSum=-1.785;VQSLOD=2.4492;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:58.07:0,58,2304	0/0:4,0:3:9.03:0,9,284	0/1:43,0:13:3.92:4,0,345	0/0:33,0:17:35.34:0,35,1235	0/0:41,0:40:46.20:0,46,1683	0/0:20,0:20:46.28:0,46,1438	0/0:14,0:14:21.62:0,22,628	0/1:24,0:24:44.04:44,0,304	0/0:19,0:19:18.06:0,18,565	0/0:35,0:35:16.65:0,17,1033	0/0:13,0:13:9.03:0,9,207	0/0:16,0:16:22.91:0,23,645	0/0:15,0:15:42.06:0,42,994	0/0:12,0:12:23.43:0,23,758	0/0:13,0:13:2.92:0,3,606	0/0:20,0:20:23.95:0,24,819	0/0:29,0:29:74.25:0,74,1931	0/0:14,0:14:12.98:0,13,291	0/0:19,0:16:32.67:0,33,958	0/0:26,0:24:47.54:0,48,1292	0/1:7,0:6:6.82:7,0,75	0/1:12,0:12:4.64:5,0,388	0/0:20,0:20:11.22:0,11,897	0/0:9,0:9:5.54:0,6,134	0/0:30,0:30:48.15:0,48,1554	1/1:6,28:34:52.26:1694,52,0	1/1:1,30:31:40.23:1312,40,0	1/1:1,5:6:12.04:425,12,0
chr10	6781590	.	AAAC	A	4667.44	PASS	AB=1.000;AC=41;AF=0.732;AN=56;BaseQRankSum=-3.823;DP=592;FS=25.830;HRun=0;HaplotypeScore=153.2043;InbreedingCoeff=0.1649;MQ=51.86;MQ0=11;MQRankSum=2.504;QD=9.22;ReadPosRankSum=-1.285;VQSLOD=2.6469;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:34,0:34:83.80:198,0,84	0/1:4,0:3:11.64:12,0,20	0/0:38,1:12:16.77:0,17,183	0/0:31,0:15:13.31:0,13,462	0/1:41,0:40:96.27:252,0,96	1/1:20,0:20:53.90:361,54,0	1/1:15,1:16:26.20:172,26,0	1/1:25,0:25:47.60:331,48,0	1/1:18,2:20:15.59:141,16,0	1/1:34,0:34:49.49:449,49,0	1/1:14,0:14:8.88:58,9,0	0/0:15,0:15:13.98:0,14,138	0/1:15,0:15:18.49:18,0,93	0/1:12,0:12:16.85:17,0,104	1/1:13,0:13:5.24:184,5,0	1/1:20,0:20:21.18:111,21,0	1/1:23,6:29:42.99:503,43,0	0/1:13,0:13:5.01:5,0,17	1/1:22,0:19:46.63:369,47,0	1/1:25,2:25:55.80:381,56,0	1/1:7,0:6:0.80:33,1,0	0/1:12,0:12:27.80:54,0,28	0/1:19,0:19:75.87:103,0,76	0/1:10,0:10:10.59:11,0,21	1/1:31,0:31:32.87:166,33,0	1/1:31,0:30:10.84:335,11,0	1/1:31,0:29:24.91:297,25,0	1/1:6,0:6:12.01:107,12,0
chr10	6781591	.	AAC	A	7704.72	PASS	AB=1.000;AC=46;AF=0.821;AN=56;BaseQRankSum=-2.732;DP=593;FS=29.222;HRun=0;HaplotypeScore=134.8555;InbreedingCoeff=0.4160;MQ=50.92;MQ0=11;MQRankSum=1.898;QD=15.14;ReadPosRankSum=-1.070;VQSLOD=2.9339;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:34,0:34:20.52:318,21,0	1/1:4,0:3:0.89:27,1,0	0/0:39,0:11:13.88:0,14,153	0/0:30,0:14:12.36:0,12,361	1/1:41,0:40:29.94:501,30,0	1/1:12,8:20:57.11:698,57,0	1/1:6,9:15:27.07:346,27,0	1/1:27,0:27:63.40:483,63,0	1/1:5,15:20:17.94:196,18,0	1/1:34,0:34:85.34:619,85,0	1/1:14,0:14:11.20:95,11,0	0/0:15,0:15:6.52:0,7,54	0/1:15,0:15:18.14:133,0,18	0/1:11,0:11:28.61:79,0,29	1/1:13,0:13:24.35:255,24,0	1/1:2,18:20:23.95:309,24,0	1/1:23,7:30:66.50:848,67,0	1/1:13,0:13:1.75:22,2,0	1/1:16,7:20:53.91:600,54,0	1/1:22,6:26:71.48:728,71,0	1/1:7,0:6:8.27:45,8,0	0/1:13,0:13:1.88:119,0,2	1/1:19,0:19:9.93:191,10,0	0/1:10,0:10:6.17:21,0,6	1/1:24,6:30:47.24:469,47,0	1/1:31,0:30:13.28:292,13,0	1/1:31,0:29:22.24:226,22,0	1/1:6,0:6:11.90:84,12,0
chr10	6781592	.	AC	A	8357.57	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=1.287;DP=586;FS=34.755;HRun=1;HaplotypeScore=125.1797;InbreedingCoeff=0.7704;MQ=51.07;MQ0=10;MQRankSum=-0.465;QD=16.07;ReadPosRankSum=1.989;VQSLOD=3.1535;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:32,1:33:77.81:559,78,0	1/1:4,0:3:8.88:61,9,0	0/0:35,1:10:5.71:0,6,118	0/0:28,2:14:11.49:0,11,283	1/1:39,2:40:99:875,104,0	1/1:19,1:20:56.87:464,57,0	1/1:11,2:13:26.88:207,27,0	1/1:27,0:27:70.18:572,70,0	1/1:18,2:20:17.94:155,18,0	1/1:32,1:33:97.38:816,97,0	1/1:0,14:14:11.93:95,12,0	1/1:15,0:15:12.69:79,13,0	1/1:15,1:16:34.33:247,34,0	1/1:11,1:12:27.79:209,28,0	1/1:12,1:13:34.23:312,34,0	1/1:19,1:20:23.94:209,24,0	1/1:26,4:30:75.97:612,76,0	1/1:13,0:13:10.92:88,11,0	1/1:22,1:20:56.91:505,57,0	1/1:23,5:26:71.01:616,71,0	1/1:7,0:6:14.10:75,14,0	1/1:13,0:13:17.90:205,18,0	1/1:18,1:19:50.16:339,50,0	1/1:9,0:9:5.99:54,6,0	1/1:8,22:30:47.71:473,48,0	1/1:31,0:30:29.41:274,29,0	1/1:31,0:29:38.01:196,38,0	1/1:5,0:5:11.50:61,12,0
chr10	6781599	.	AC	A	4780.92	PASS	AB=0.959;AC=36;AF=0.643;AN=56;BaseQRankSum=1.228;DP=596;FS=32.528;HRun=1;HaplotypeScore=140.8431;InbreedingCoeff=0.5689;MQ=51.89;MQ0=10;MQRankSum=-5.583;QD=12.01;ReadPosRankSum=-4.784;VQSLOD=0.7512;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:34,0:34:12.44:12,0,455	1/1:5,0:4:11.88:85,12,0	0/0:32,1:11:6.22:0,6,249	0/0:29,0:14:37.64:0,38,421	1/1:43,1:43:99:902,100,0	0/0:19,0:19:8.44:0,8,276	0/0:14,1:15:5.54:0,6,116	1/1:27,0:27:67.77:559,68,0	0/0:19,1:20:11.88:0,12,132	1/1:34,0:34:99:840,99,0	1/1:14,0:14:11.93:93,12,0	1/1:14,0:14:2.68:80,3,0	1/1:18,1:19:39.16:286,39,0	1/1:13,0:13:28.91:240,29,0	1/1:14,0:14:35.95:329,36,0	0/0:21,0:21:27.07:0,27,155	0/0:32,1:33:36.05:0,36,416	0/1:12,0:12:20.23:64,0,20	0/1:22,2:22:60.28:60,0,274	0/0:26,1:25:40.80:0,41,312	1/1:6,1:6:12.03:74,12,0	1/1:10,0:10:4.20:113,4,0	1/1:22,0:22:51.25:358,51,0	1/1:9,0:9:3:58,3,0	0/1:28,3:31:6.73:7,0,177	1/1:28,1:28:49.96:438,50,0	1/1:31,0:29:11.43:139,11,0	1/1:5,0:5:10.71:43,11,0
chr10	6781794	.	AGAGTT	A	11940.74	PASS	AB=0.943;AC=29;AF=0.518;AN=56;BaseQRankSum=10.242;DP=584;FS=3.839;HRun=0;HaplotypeScore=123.1010;InbreedingCoeff=0.9238;MQ=84.35;MQ0=0;MQRankSum=-6.370;QD=44.39;ReadPosRankSum=3.059;VQSLOD=4.6076;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:60.11:0,60,2277	1/1:0,5:5:12.04:256,12,0	0/0:20,0:20:54.18:0,54,1611	0/0:25,0:26:68.96:0,69,1991	1/1:0,26:26:72.20:1412,72,0	0/0:27,0:27:78.25:0,78,2366	0/0:22,0:22:66.23:0,66,2032	1/1:3,25:26:69.20:1301,69,0	0/0:28,0:28:81.26:0,81,2465	1/1:1,27:28:81.28:1726,81,0	1/1:1,11:12:27.05:500,27,0	1/1:1,13:14:36.12:767,36,0	1/1:2,18:20:42.14:895,42,0	1/1:1,20:21:45.15:959,45,0	1/1:0,20:20:54.14:1107,54,0	0/0:27,0:27:81.25:0,81,2383	0/0:21,0:21:57.20:0,57,1786	1/1:0,10:10:24.08:512,24,0	0/0:26,0:26:75.26:0,75,2331	0/0:27,0:27:81.28:0,81,2485	1/1:0,15:15:30.06:589,30,0	1/1:0,12:12:30.02:551,30,0	1/1:1,14:15:39.13:831,39,0	1/1:1,9:10:24.08:512,24,0	0/0:20,0:20:60.21:0,60,1770	0/1:31,2:33:23.14:23,0,2609	0/0:26,0:26:75.26:0,75,2341	0/0:17,0:17:51.16:0,51,1476
chr10	6783042	.	TAA	T	4739.60	PASS	AB=0.588;AC=33;AF=0.589;AN=56;BaseQRankSum=-3.149;DP=610;FS=3.782;HRun=15;HaplotypeScore=87.7853;InbreedingCoeff=0.8285;MQ=75.26;MQ0=4;MQRankSum=-0.969;QD=13.74;ReadPosRankSum=4.163;VQSLOD=4.3350;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,13:16:29.30:263,29,0	1/1:3,6:11:14.55:162,15,0	0/0:36,0:21:29.29:0,29,322	0/0:30,0:18:29.33:0,29,242	1/1:9,21:32:58.39:485,58,0	0/0:9,0:27:55.32:0,55,326	0/1:4,0:12:3.67:4,0,66	1/1:6,17:25:50.25:419,50,0	0/1:3,1:12:8.46:8,0,34	1/1:12,16:28:44.80:396,45,0	1/1:9,11:21:29.48:248,29,0	1/1:5,11:16:29.94:264,30,0	1/1:2,15:18:32.55:276,33,0	1/1:4,19:23:47.94:423,48,0	1/1:4,13:19:29.53:294,30,0	0/1:5,1:16:1.24:1,0,51	0/0:4,0:15:27.96:0,28,125	1/1:4,12:17:29.71:249,30,0	0/0:7,0:24:48.05:0,48,223	0/0:8,1:34:45.84:0,46,333	1/1:2,10:12:20.98:185,21,0	1/1:7,16:24:35.67:361,36,0	1/1:5,19:27:47.27:438,47,0	1/1:4,12:16:29.96:264,30,0	0/0:5,1:20:7.63:0,8,127	0/0:26,0:27:65.63:0,66,810	0/0:26,0:31:82.62:0,83,920	0/0:17,0:20:47.60:0,48,570
chr10	6784656	.	GAT	G	14248.71	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=13.421;DP=635;FS=1.327;HRun=0;HaplotypeScore=94.0039;InbreedingCoeff=0.9972;MQ=76.17;MQ0=0;MQRankSum=-3.240;QD=38.00;ReadPosRankSum=0.271;VQSLOD=6.8239;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,102,1860	1/1:0,10:10:30.10:429,30,0	0/0:17,0:17:36.08:0,36,624	0/0:11,0:12:29.98:0,30,453	1/1:3,23:26:75.25:1073,75,0	0/0:30,0:30:81.28:0,81,1477	0/0:13,0:13:39.13:0,39,706	1/1:3,42:45:99:1725,123,0	0/0:27,0:27:81.28:0,81,1484	1/1:5,32:37:99:1404,99,0	1/1:2,15:17:47.98:617,48,0	1/1:0,20:20:57.19:816,57,0	1/1:1,27:28:69.23:987,69,0	1/1:0,12:12:36.12:515,36,0	1/1:2,24:26:75.25:1072,75,0	0/0:23,0:23:69.21:0,69,1217	0/0:20,0:20:51.15:0,51,890	1/1:2,15:16:42.14:598,42,0	0/0:23,0:23:66.23:0,66,1208	0/0:39,0:39:99:0,114,2008	1/1:3,23:26:54.10:727,54,0	1/1:2,21:23:60.12:833,60,0	1/1:3,22:24:60.20:851,60,0	1/1:1,8:8:24.08:343,24,0	0/0:20,0:20:60.21:0,60,1100	1/1:1,19:20:60.19:843,60,0	1/1:1,28:29:84.28:1201,84,0	1/1:0,5:5:15.05:214,15,0
chr10	6784709	.	GA	G	7561	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=14.350;DP=579;FS=5.332;HRun=10;HaplotypeScore=87.1764;InbreedingCoeff=0.9666;MQ=76.36;MQ0=0;MQRankSum=-4.118;QD=20.83;ReadPosRankSum=3.380;VQSLOD=5.6733;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,31:34:80.97:703,81,0	1/1:1,9:10:26.99:234,27,0	0/0:15,1:16:3.66:0,4,226	0/0:14,1:14:14.77:0,15,139	1/1:3,25:28:68.97:599,69,0	0/0:21,0:23:63:0,63,678	0/0:16,0:16:42.11:0,42,465	1/1:6,19:25:56.96:491,57,0	0/0:27,0:27:60.08:0,60,648	1/1:4,24:28:71.97:625,72,0	1/1:4,19:23:17.78:383,18,0	1/1:1,11:12:32.99:286,33,0	1/1:4,13:17:35.98:312,36,0	1/1:3,19:22:52.80:447,53,0	1/1:2,17:19:44.97:391,45,0	0/0:26,0:27:72.03:0,72,777	0/0:21,0:22:60:0,60,645	1/1:3,21:24:62.94:536,63,0	0/0:19,0:19:39.08:0,39,419	0/0:26,0:26:69.19:0,69,763	1/1:2,13:15:35.98:312,36,0	1/1:3,14:17:47.99:417,48,0	1/1:2,26:28:68.96:599,69,0	1/1:1,8:8:18:156,18,0	0/0:25,0:25:72.19:0,72,795	1/1:4,15:19:44.98:391,45,0	1/1:5,22:27:65.97:573,66,0	1/1:2,4:6:12:104,12,0
chr10	6784990	.	C	CTGCA	31973.24	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-16.384;DP=825;FS=0.560;HRun=0;HaplotypeScore=113.2387;InbreedingCoeff=0.9971;MQ=71.58;MQ0=0;MQRankSum=-1.991;QD=63.44;ReadPosRankSum=1.821;VQSLOD=6.7578;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:63,0:63:99:0,172,3064	1/1:2,7:9:24.08:614,24,0	0/0:11,0:11:23.80:0,24,353	0/0:16,0:16:32.94:0,33,452	1/1:2,25:30:63.22:1656,63,0	0/0:25,0:25:75.24:0,75,1338	0/0:26,0:26:72.25:0,72,1332	1/1:7,25:34:96.33:2335,96,0	0/0:30,0:30:81.28:0,81,1511	1/1:7,22:30:84.27:2061,84,0	1/1:3,16:20:48.16:1248,48,0	1/1:1,25:26:69.24:1815,69,0	1/1:2,28:30:84.29:2212,84,0	1/1:5,30:36:87.30:2272,87,0	1/1:6,49:57:99:3951,151,0	0/0:45,0:45:99:0,132,2415	0/0:35,0:35:99:0,102,1882	1/1:2,16:18:42.14:1120,42,0	0/0:22,0:22:60.21:0,60,1088	0/0:29,0:29:84.26:0,84,1493	1/1:12,43:56:99:3230,123,0	1/1:0,29:29:87.30:2291,87,0	1/1:5,17:23:35.89:932,36,0	1/1:3,26:30:72.25:1894,72,0	0/0:19,0:19:51.17:0,51,937	1/1:2,24:27:84.27:2032,84,0	1/1:7,28:34:75.26:1911,75,0	1/1:0,5:13:15.05:399,15,0
chr10	6785348	.	G	GA	1081.53	PASS	AB=0.755;AC=22;AF=0.393;AN=56;BaseQRankSum=1.546;DP=558;FS=0.000;HRun=15;HaplotypeScore=84.0605;InbreedingCoeff=0.1963;MQ=56.24;MQ0=47;MQRankSum=-3.659;QD=3.47;ReadPosRankSum=-2.761;VQSLOD=-0.0365;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:21,1:26:1.66:104,0,2	1/1:5,6:10:2.49:60,2,0	0/0:20,0:10:11.67:0,12,47	0/0:18,0:3:1.77:0,2,5	1/1:14,11:26:8.77:160,9,0	0/0:15,1:17:13.08:0,13,165	0/0:16,3:17:7.21:0,7,154	0/1:16,2:19:16.40:127,0,16	0/0:12,0:13:10.64:0,11,59	0/1:8,8:16:33.68:54,0,34	1/1:5,9:14:17.94:144,18,0	0/1:8,8:15:13.07:40,0,13	0/1:6,8:14:16.86:17,0,27	1/1:12,2:11:14.98:124,15,0	0/1:20,1:22:13.79:50,0,14	0/0:16,0:15:19.57:0,20,113	0/0:34,2:35:27.81:0,28,295	0/1:9,5:15:52.83:53,0,55	0/0:15,0:16:28.31:0,28,162	0/1:28,0:31:14.58:15,0,83	1/1:6,6:11:0.47:1,0,0	1/1:11,6:17:17.35:119,17,0	0/1:7,13:22:15.65:18,0,16	0/1:9,17:23:6.06:170,0,6	0/0:16,0:17:26.57:0,27,143	0/0:21,0:19:26.09:0,26,137	0/0:24,0:26:28.35:0,28,160	0/0:13,0:11:19.66:0,20,114
chr10	6785777	.	A	ACC	17855.80	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-18.562;DP=819;FS=5.326;HRun=2;HaplotypeScore=83.2741;InbreedingCoeff=0.9846;MQ=92.65;MQ0=2;MQRankSum=-4.345;QD=44.64;ReadPosRankSum=2.383;VQSLOD=4.6714;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,150,2096	1/1:0,8:8:18.06:337,18,0	0/0:36,0:36:99:0,99,1389	0/0:33,0:33:96.29:0,96,1365	1/1:1,16:18:45.15:842,45,0	0/0:19,0:19:57.10:0,57,766	0/0:36,0:36:99:0,105,1525	1/1:3,33:37:99:1705,102,0	0/0:32,0:32:93.27:0,93,1311	1/1:1,30:30:87.25:1556,87,0	1/1:0,16:16:42.14:786,42,0	1/1:2,41:44:99:1967,105,0	1/1:2,23:27:60.21:1123,60,0	1/1:1,26:27:66.23:1234,66,0	1/1:1,39:40:90.31:1686,90,0	0/0:49,0:48:99:0,141,2036	0/0:39,0:39:99:0,111,1482	1/1:1,21:23:54.19:1011,54,0	0/0:16,0:16:48.13:0,48,651	0/0:21,0:21:54.01:0,54,774	1/1:1,45:47:99:2132,114,0	1/1:0,31:31:69.24:1288,69,0	1/1:0,14:14:36.12:671,36,0	1/1:3,33:36:81.28:1517,81,0	0/0:24,0:23:69.21:0,69,977	0/0:25,0:25:69.22:0,69,997	0/0:27,0:27:81.27:0,81,1190	0/0:7,0:7:6.02:0,6,88
chr10	6785854	.	T	TAAA	2961.72	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-6.556;DP=838;FS=4.407;HRun=1;HaplotypeScore=148.5654;InbreedingCoeff=0.9434;MQ=90.31;MQ0=1;MQRankSum=-6.146;QD=54.85;ReadPosRankSum=1.827;VQSLOD=4.0278;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,46:54:99:3057,142,0	0/0:9,0:9:24.08:0,24,414	0/0:30,0:30:87.77:0,88,1475	0/0:37,0:36:96.25:0,96,1582	0/0:26,0:26:72.23:0,72,1242	0/0:20,0:20:57.12:0,57,916	0/0:31,0:30:81.26:0,81,1394	0/0:44,0:44:99:0,126,2120	0/0:40,0:40:95.94:0,96,1658	0/0:35,0:35:99:0,105,1796	0/0:14,0:14:39.13:0,39,687	0/0:38,0:38:99:0,102,1731	0/0:30,0:30:75.26:0,75,1316	0/0:28,0:28:75.24:0,75,1294	0/0:31,0:31:81.26:0,81,1385	0/0:61,0:61:99:0,169,2964	0/0:34,0:34:81.25:0,81,1398	0/0:27,0:26:72.20:0,72,1225	0/0:24,0:24:72.22:0,72,1182	0/0:22,0:22:63.17:0,63,1061	0/0:46,0:46:99:0,126,2187	0/0:21,0:21:57.18:0,57,975	0/0:17,0:17:42.10:0,42,708	0/0:31,0:30:86.57:0,87,1517	0/0:28,0:28:75.26:0,75,1320	0/0:27,0:27:81.27:0,81,1403	0/0:30,0:30:90.24:0,90,1523	0/0:3,0:3:9.03:0,9,159
chr10	6785925	.	CA	C	8944.48	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-14.878;DP=707;FS=6.038;HRun=1;HaplotypeScore=131.3335;InbreedingCoeff=0.9845;MQ=78.51;MQ0=0;MQRankSum=2.709;QD=34.80;ReadPosRankSum=3.558;VQSLOD=4.2667;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,35:38:99:1460,111,0	0/0:10,0:10:30.10:0,30,471	0/0:12,0:11:10:0,10,206	0/0:23,0:23:9.68:0,10,296	0/0:24,0:24:66.14:0,66,949	1/1:0,22:22:60.20:834,60,0	1/1:0,28:28:60.20:832,60,0	0/0:43,0:43:99:0,123,1746	1/1:0,34:34:84.28:1169,84,0	0/0:42,0:42:99:0,126,1963	0/0:19,0:19:51.14:0,51,761	0/0:39,0:39:99:0,117,1751	0/0:17,0:17:51.16:0,51,788	0/0:22,0:22:66.21:0,66,1025	0/0:33,0:33:99:0,99,1496	1/1:0,28:29:72.20:981,72,0	1/1:0,23:23:48.16:667,48,0	0/0:23,0:23:69.13:0,69,995	1/1:0,25:25:75.16:958,75,0	1/1:0,33:33:90.14:1165,90,0	0/0:19,0:19:57.19:0,57,900	0/0:24,0:24:69.22:0,69,1068	0/0:22,0:22:63.20:0,63,976	0/0:22,0:21:66.21:0,66,1017	1/1:0,25:25:63.21:877,63,0	0/0:28,0:28:80.67:0,81,1248	0/0:18,0:18:54.18:0,54,852	0/0:10,0:10:30.10:0,30,475
chr10	6786310	.	T	TAAA	14422.58	PASS	AB=0.658;AC=42;AF=0.750;AN=56;BaseQRankSum=-2.383;DP=757;FS=14.878;HRun=11;HaplotypeScore=184.8815;InbreedingCoeff=0.6110;MQ=73.37;MQ0=1;MQRankSum=-4.340;QD=22.89;ReadPosRankSum=-3.657;VQSLOD=0.6361;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:29,1:45:71.74:822,72,0	1/1:1,12:13:35.97:563,36,0	0/0:19,0:19:26.42:0,26,226	0/0:21,0:21:26.68:0,27,284	1/1:6,19:29:78.39:1164,78,0	1/1:15,0:26:19.34:319,19,0	1/1:15,0:28:34.52:282,35,0	1/1:10,19:34:78:1070,78,0	0/1:9,0:22:19.94:97,0,20	1/1:14,26:45:93.16:1486,93,0	1/1:12,12:25:54.07:853,54,0	1/1:6,14:22:39.11:690,39,0	1/1:9,13:24:36.10:621,36,0	1/1:3,17:23:33.09:583,33,0	1/1:9,18:35:51.02:740,51,0	1/1:10,0:31:8.70:267,9,0	0/1:15,0:27:41.56:230,0,42	1/1:7,9:21:31.37:509,31,0	0/1:10,0:17:15.99:149,0,16	1/1:11,0:30:43.35:368,43,0	1/1:4,12:18:33.98:555,34,0	1/1:5,18:27:63.04:969,63,0	1/1:9,17:31:53.42:908,53,0	1/1:2,23:27:54.16:979,54,0	0/1:10,0:29:33.74:198,0,34	0/0:24,0:26:49.45:0,49,575	0/0:41,0:42:99:0,102,1150	0/0:17,0:18:35.86:0,36,385
chr10	6786455	.	CTTA	C	728.61	PASS	AB=0.648;AC=1;AF=0.018;AN=56;BaseQRankSum=4.848;DP=659;FS=4.618;HRun=0;HaplotypeScore=98.9319;InbreedingCoeff=-0.0193;MQ=81.36;MQ0=0;MQRankSum=-2.646;QD=20.82;ReadPosRankSum=3.134;VQSLOD=3.5064;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:81.28:0,81,1726	0/0:8,0:8:24.08:0,24,544	0/0:21,0:21:60.17:0,60,1248	0/0:26,0:26:68.04:0,68,1328	0/0:29,0:28:81.22:0,81,1730	0/0:26,0:26:78.27:0,78,1744	0/0:27,0:27:78.25:0,78,1684	0/0:39,0:39:99:0,108,2394	0/0:21,0:21:63.20:0,63,1367	0/0:24,0:24:69.24:0,69,1552	0/0:13,0:13:39.13:0,39,823	0/0:22,0:22:66.23:0,66,1492	0/0:20,0:20:60.21:0,60,1325	0/0:19,0:19:57.20:0,57,1292	0/1:16,19:35:99:803,0,856	0/0:29,0:29:87.30:0,87,1951	0/0:21,0:21:63.22:0,63,1405	0/0:24,0:24:72.25:0,72,1611	0/0:26,0:26:75.26:0,75,1670	0/0:22,0:21:60.19:0,60,1316	0/0:25,0:25:72.25:0,72,1600	0/0:24,0:24:69.22:0,69,1473	0/0:20,0:20:57.20:0,57,1273	0/0:33,0:33:96.31:0,96,2128	0/0:15,0:15:45.15:0,45,986	0/0:32,0:32:96.33:0,96,2160	0/0:24,0:24:66.23:0,66,1495	0/0:4,0:4:12.04:0,12,272
chr10	6786813	.	GTC	G	1879.62	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=8.133;DP=495;FS=5.809;HRun=0;HaplotypeScore=142.7520;InbreedingCoeff=0.8273;MQ=60.37;MQ0=23;MQRankSum=-5.523;QD=13.82;ReadPosRankSum=1.485;VQSLOD=3.4916;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:27:17.71:0,18,216	1/1:1,3:4:11.93:142,12,0	0/0:45,0:21:60.20:0,60,953	0/0:60,1:32:7.51:0,8,835	1/1:4,8:12:12.01:132,12,0	0/0:18,0:14:36.11:0,36,566	0/0:16,0:13:9.48:0,9,144	1/1:14,0:14:29.71:229,30,0	0/0:20,0:19:21.07:0,21,307	1/1:8,6:14:35.79:366,36,0	1/1:3,2:5:3.01:33,3,0	1/1:8,3:14:20.86:209,21,0	1/1:7,0:12:18.80:232,19,0	1/1:8,2:17:29.43:302,29,0	1/1:2,4:6:12.04:153,12,0	0/0:34,0:31:54.18:0,54,797	0/0:17,0:15:30.10:0,30,484	1/1:1,1:2:5.95:64,6,0	0/0:35,0:32:83.99:0,84,1137	0/0:29,0:24:29.71:0,30,486	1/1:8,1:9:3.01:40,3,0	1/1:7,2:12:8.88:108,9,0	1/1:5,0:9:6:57,6,0	1/1:4,0:4:2.99:24,3,0	0/0:10,0:9:12.04:0,12,186	0/0:23,0:19:7.45:0,7,454	0/0:20,0:20:23.84:0,24,277	0/0:2,0:2:5.98:0,6,47
chr10	6786823	.	CTGT	C	43.68	PASS	AB=0.831;AC=14;AF=0.269;AN=52;BaseQRankSum=7.840;DP=456;FS=3.943;HRun=0;HaplotypeScore=135.4808;InbreedingCoeff=0.3369;MQ=48.98;MQ0=33;MQRankSum=-5.690;QD=0.70;ReadPosRankSum=4.953;VQSLOD=1.9821;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:22:7.89:0,8,71	1/1:2,1:3:8.15:38,8,0	0/0:55,0:20:56.17:0,56,894	0/0:81,0:31:65.17:0,65,974	0/1:7,4:11:0.03:0,0,0	0/0:17,0:12:30.08:0,30,480	0/0:17,0:14:4.55:0,5,121	./.	0/0:21,0:18:15.05:0,15,211	0/1:4,3:7:16.64:17,0,27	0/0:5,1:6:3.34:0,3,21	0/1:7,1:8:10.82:11,0,43	0/0:6,0:6:5.32:0,5,44	0/0:11,1:11:0.66:0,1,27	1/1:0,4:4:7.80:51,8,0	0/0:32,0:27:37.20:0,37,534	0/0:19,0:16:26.99:0,27,449	1/1:1,0:1:2.74:12,3,0	0/0:32,0:27:69.22:0,69,1075	0/0:31,0:25:26.13:0,26,466	1/1:1,1:2:2.96:19,3,0	1/1:6,0:5:1.92:6,2,0	0/0:6,0:5:2.68:0,3,16	./.	0/0:10,0:7:12.04:0,12,191	0/0:18,0:13:0.65:0,1,240	0/1:20,0:19:27.36:27,0,159	0/0:2,0:2:5.92:0,6,39
chr10	6786827	.	CTGTCTGTCTGT	C	812.45	PASS	AB=0.939;AC=22;AF=0.407;AN=54;BaseQRankSum=8.931;DP=486;FS=0.000;HRun=0;HaplotypeScore=174.9367;InbreedingCoeff=0.1402;MQ=45.09;MQ0=37;MQRankSum=-4.743;QD=4.59;ReadPosRankSum=6.395;VQSLOD=2.0556;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:22:11.58:12,0,110	0/1:2,1:3:13.17:81,0,13	0/0:57,0:17:48.16:0,48,1620	0/0:88,0:31:76.23:0,76,2088	1/1:10,4:13:2.32:12,2,0	0/0:15,0:9:21.07:0,21,714	0/1:15,0:13:5.66:6,0,225	0/0:7,0:7:14.93:0,15,112	0/0:20,0:17:14.88:0,15,375	0/1:9,3:11:99:100,0,156	1/1:7,1:8:0.16:1,0,0	0/1:8,0:9:67.79:88,0,68	0/1:6,0:6:13.83:89,0,14	1/1:12,0:11:28.38:231,28,0	1/1:0,4:4:12:105,12,0	0/0:31,0:26:35.98:0,36,740	0/0:18,0:15:23.99:0,24,661	0/1:3,0:3:17.14:24,0,17	0/0:30,0:25:63.19:0,63,1699	0/0:29,0:23:21.95:0,22,656	1/1:6,1:7:2.40:31,2,0	1/1:9,0:8:3.07:29,3,0	0/1:11,0:10:0.59:2,0,1	./.	0/0:9,0:6:9.03:0,9,276	0/1:20,0:15:36.43:36,0,836	0/1:18,0:17:99:125,0,271	0/0:2,0:2:6.02:0,6,150
chr10	6786829	.	GTC	G	86.67	PASS	AB=1.000;AC=16;AF=0.296;AN=54;BaseQRankSum=6.540;DP=502;FS=6.992;HRun=0;HaplotypeScore=150.8633;InbreedingCoeff=0.5313;MQ=45.38;MQ0=38;MQRankSum=-2.908;QD=0.87;ReadPosRankSum=1.684;VQSLOD=1.9767;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:22:8.66:0,9,58	1/1:3,0:3:7.58:29,8,0	0/0:60,0:17:45.15:0,45,733	0/0:91,0:32:32.84:0,33,811	1/1:13,2:14:0.29:1,0,0	0/0:14,0:8:18.04:0,18,308	0/0:15,0:12:6:0,6,99	0/1:16,0:16:49.70:63,0,50	0/0:19,0:16:12.04:0,12,176	1/1:13,0:11:7.72:62,8,0	0/0:6,2:8:0:0,0,1	0/0:11,0:11:6.94:0,7,32	0/0:7,0:7:1.45:0,1,11	0/1:16,0:13:0.21:0,0,5	1/1:4,0:4:7.30:33,7,0	0/0:28,0:23:27.07:0,27,394	0/0:18,0:15:24.08:0,24,403	1/1:3,0:3:4.53:24,5,0	0/0:29,0:24:60.13:0,60,889	0/0:27,0:22:15.14:0,15,273	1/1:6,1:7:2.46:11,2,0	0/1:9,0:8:0.11:0,0,0	0/1:14,0:12:0.20:0,0,1	./.	0/0:9,0:6:9:0,9,108	0/0:20,0:15:33.64:0,34,338	0/0:17,0:16:12.90:0,13,94	0/0:2,0:2:5.98:0,6,47
chr10	6786833	.	GTC	G	462.11	PASS	AB=0.834;AC=21;AF=0.389;AN=54;BaseQRankSum=7.094;DP=533;FS=0.000;HRun=0;HaplotypeScore=154.5050;InbreedingCoeff=0.2843;MQ=42.01;MQ0=38;MQRankSum=-3.792;QD=2.30;ReadPosRankSum=4.226;VQSLOD=2.3298;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:0,0:22:4.65:5,0,6	1/1:3,0:3:7.74:32,8,0	0/0:58,0:17:45.01:0,45,629	0/0:92,0:31:35.69:0,36,693	1/1:15,1:15:0.29:1,0,0	0/0:13,0:7:15.05:0,15,211	0/0:17,0:14:2.99:0,3,51	0/1:14,6:20:74.50:195,0,75	0/0:19,0:16:5.75:0,6,61	1/1:11,4:12:11.11:176,11,0	0/0:11,1:12:0:0,0,1	0/1:13,1:13:19.76:20,0,21	0/1:8,1:9:5.70:33,0,6	0/1:15,2:14:1.97:2,0,4	1/1:9,0:7:8.17:39,8,0	0/0:29,0:23:20.93:0,21,210	0/0:19,0:16:23.99:0,24,289	1/1:1,2:3:4.83:48,5,0	0/0:30,0:25:56.87:0,57,588	0/0:28,0:22:12.14:0,12,195	1/1:2,5:7:2.53:12,3,0	0/1:6,3:8:0.15:0,0,0	0/1:11,5:14:0.20:0,0,1	./.	0/0:7,0:4:3.01:0,3,58	0/1:21,0:15:9.51:10,0,111	0/1:18,0:17:9.22:36,0,9	0/0:2,0:2:0.47:0,0,1
chr10	6786835	.	CTG	C	1358.18	PASS	AB=1.000;AC=31;AF=0.574;AN=54;BaseQRankSum=7.312;DP=532;FS=9.912;HRun=0;HaplotypeScore=150.6073;InbreedingCoeff=0.6914;MQ=40.13;MQ0=37;MQRankSum=-4.102;QD=6.32;ReadPosRankSum=2.513;VQSLOD=2.9309;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:22:0.20:27,0,0	1/1:3,0:3:9.01:87,9,0	0/0:59,0:17:36.02:0,36,496	0/0:93,0:29:27.75:0,28,531	1/1:17,0:16:2.54:18,3,0	0/0:13,0:7:14.86:0,15,107	0/0:17,0:14:2.86:0,3,25	1/1:20,0:20:40.70:220,41,0	0/0:18,0:15:4.81:0,5,30	1/1:15,0:12:29.32:220,29,0	0/1:12,0:12:0:0,0,1	1/1:14,0:13:17.54:94,18,0	1/1:9,0:9:18.89:103,19,0	1/1:17,0:14:25.80:149,26,0	1/1:9,0:7:11.75:110,12,0	0/0:29,0:23:14.20:0,14,85	0/0:19,0:16:23.19:0,23,177	1/1:4,0:4:5.98:47,6,0	0/0:30,0:25:26.25:0,26,193	0/0:28,0:22:10.67:0,11,95	1/1:7,0:7:2.79:31,3,0	1/1:9,0:8:2.92:18,3,0	0/1:16,0:14:0.20:0,0,1	./.	0/0:7,0:4:3.01:0,3,54	1/1:16,3:14:8.01:194,8,0	1/1:12,5:16:20.91:183,21,0	1/1:2,0:2:5.92:39,6,0
chr10	6786840	.	TCTCTCTCCTCTCTCTCTCTCC	T	2633.07	PASS	AB=1.000;AC=23;AF=0.442;AN=52;BaseQRankSum=2.092;DP=571;FS=21.056;HRun=0;HaplotypeScore=228.3891;InbreedingCoeff=0.3789;MQ=35.41;MQ0=38;MQRankSum=1.234;QD=10.17;ReadPosRankSum=5.852;VQSLOD=0.4877;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:22:6.02:214,6,0	0/0:4,0:4:9.35:0,9,143	0/0:53,0:13:30.10:0,30,955	0/0:90,0:21:35.86:0,36,1033	0/0:21,0:19:1.54:0,2,5	0/1:14,0:7:9.51:32,0,10	0/0:19,0:16:1.31:0,1,3	0/0:30,0:30:43.78:0,44,1428	1/1:18,0:15:2.36:52,2,0	0/1:22,0:18:6.96:7,0,734	0/0:18,0:18:2.77:0,3,5	0/1:16,0:15:20.87:21,0,290	0/1:15,0:14:72.89:73,0,168	0/1:17,0:14:39.20:39,0,94	0/0:12,0:10:4.47:0,4,13	1/1:26,0:20:8.63:154,9,0	1/1:19,0:16:11.59:198,12,0	0/0:5,0:5:11.90:0,12,137	1/1:26,0:23:20.77:347,21,0	1/1:26,0:20:0.73:2,1,0	0/0:9,0:8:4.37:0,4,45	0/0:12,0:11:3.93:0,4,30	0/0:20,0:18:12.90:0,13,61	./.	./.	1/1:14,3:11:21.07:689,21,0	1/1:12,5:16:18.53:894,19,0	1/1:2,0:2:6.02:76,6,0
chr10	6786844	.	TCTCCTCTCTCTCTCTCC	T	3185.88	PASS	AB=1.000;AC=27;AF=0.519;AN=52;BaseQRankSum=1.789;DP=565;FS=29.876;HRun=0;HaplotypeScore=202.0039;InbreedingCoeff=0.3441;MQ=33.19;MQ0=40;MQRankSum=0.096;QD=11.50;ReadPosRankSum=5.225;VQSLOD=0.7319;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:22:6.02:159,6,0	0/1:4,0:4:23.24:23,0,64	0/0:53,0:11:30.10:0,30,829	0/0:84,0:16:35.62:0,36,862	0/0:21,0:19:1.54:0,2,4	1/1:13,0:6:6.02:74,6,0	1/1:17,1:15:0.56:4,1,0	0/0:33,0:33:26.11:0,26,898	1/1:19,0:16:2.36:104,2,0	0/1:22,0:18:15.11:15,0,413	0/0:18,0:18:2.30:0,2,4	0/1:16,0:15:32.13:32,0,156	0/1:17,0:16:77.61:78,0,86	0/1:18,0:15:18.23:78,0,18	0/0:14,0:12:4.47:0,4,13	1/1:27,0:21:8.13:311,8,0	1/1:15,2:14:11.76:400,12,0	0/0:5,0:5:7.63:0,8,64	1/1:23,1:21:39.06:629,39,0	1/1:22,2:18:0.78:2,1,0	0/0:9,0:8:4.35:0,4,26	0/0:12,0:11:3.82:0,4,12	0/0:21,0:18:11.14:0,11,49	./.	./.	1/1:16,0:10:21.07:612,21,0	1/1:16,0:15:18.53:754,19,0	1/1:2,0:2:6.02:76,6,0
chr10	6786846	.	TCCTCTCTCTCTCTCC	T	3675.02	PASS	AB=0.897;AC=28;AF=0.538;AN=52;BaseQRankSum=2.877;DP=571;FS=22.132;HRun=0;HaplotypeScore=190.9656;InbreedingCoeff=0.2760;MQ=33.03;MQ0=38;MQRankSum=1.133;QD=13.03;ReadPosRankSum=3.796;VQSLOD=1.2841;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:22:6.01:130,6,0	0/1:3,0:4:43.01:44,0,43	0/0:55,0:10:30.10:0,30,787	0/0:84,0:16:35.24:0,35,815	0/0:16,0:20:1.54:0,2,3	1/1:2,11:6:6.02:94,6,0	1/1:3,12:14:0.27:5,0,0	0/0:33,0:35:9.47:0,9,670	1/1:1,18:17:2.39:135,2,0	0/1:21,0:18:19.96:20,0,261	0/0:10,0:19:1.36:0,1,3	0/1:16,0:16:39.20:39,0,91	0/1:15,0:16:63.79:86,0,64	0/1:18,0:15:6.79:129,0,7	0/0:14,0:12:4:0,4,13	1/1:2,24:21:8.19:409,8,0	1/1:3,12:14:11.84:545,12,0	0/1:4,0:5:9.71:10,0,44	1/1:7,16:21:39.06:669,39,0	1/1:3,19:17:0.30:1,0,0	0/0:7,0:8:3.91:0,4,22	0/0:8,0:10:3.11:0,3,9	0/0:14,0:19:11.12:0,11,48	./.	./.	1/1:9,1:10:21.07:587,21,0	1/1:5,11:15:18.53:696,19,0	1/1:0,0:2:6.02:76,6,0
chr10	6786847	.	C	CT	3138.65	PASS	AB=0.929;AC=40;AF=0.769;AN=52;BaseQRankSum=1.910;DP=568;FS=30.652;HRun=1;HaplotypeScore=151.0950;InbreedingCoeff=0.4889;MQ=32.81;MQ0=36;MQRankSum=1.138;QD=8.39;ReadPosRankSum=0.924;VQSLOD=-0.6166;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:22:2.51:15,3,0	1/1:5,0:5:8.22:81,8,0	0/0:55,0:10:30.10:0,30,408	0/0:83,0:16:32.86:0,33,422	0/1:20,3:21:0.21:1,0,0	1/1:13,0:6:6.02:74,6,0	1/1:16,1:14:1.90:7,2,0	1/1:13,22:35:93.91:1230,94,0	1/1:20,0:17:0.89:2,1,0	1/1:15,8:20:47.79:553,48,0	0/1:16,4:20:0.21:1,0,0	1/1:11,8:17:23.68:316,24,0	1/1:12,6:17:14.85:195,15,0	1/1:12,5:15:11.93:152,12,0	0/0:9,7:14:1.80:0,2,4	1/1:25,1:20:2.65:6,3,0	1/1:16,0:13:5.14:13,5,0	1/1:5,0:5:5.89:66,6,0	1/1:17,0:16:21.87:266,22,0	0/0:23,0:17:0:0,0,1	1/1:9,0:8:0.68:2,1,0	1/1:11,0:10:0.17:0,0,0	0/1:22,0:19:0.12:0,0,1	./.	./.	1/1:12,2:8:11.05:151,11,0	0/1:16,0:15:1.80:54,0,2	1/1:2,0:2:6.02:76,6,0
chr10	6786878	.	CGTGTGTGTGTGTGTGTGTGTGTGT	C	1845.63	PASS	AB=0.778;AC=11;AF=0.239;AN=46;BaseQRankSum=2.419;DP=359;FS=5.264;HRun=0;HaplotypeScore=144.6145;InbreedingCoeff=0.4369;MQ=26.61;MQ0=25;MQRankSum=-0.939;QD=41.95;ReadPosRankSum=3.084;VQSLOD=2.2091;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:24:6.49:0,6,343	1/1:1,1:2:3.01:184,3,0	0/0:30,0:7:5.98:0,6,65	./.	0/0:7,3:9:1.24:0,1,3	0/0:12,0:6:3.01:0,3,222	0/0:20,0:16:0.11:0,0,1	0/0:18,0:18:2.96:0,3,19	0/0:16,0:13:6.02:0,6,450	1/1:7,3:7:9:562,9,0	0/0:7,1:8:1.41:0,1,3	1/1:3,2:6:9:482,9,0	1/1:3,2:5:9.03:558,9,0	./.	0/0:6,2:8:0.47:0,0,1	0/0:23,0:18:21.46:0,21,1337	0/0:14,0:11:3.48:0,3,185	0/1:5,2:5:99:158,0,171	0/0:13,0:12:18.03:0,18,869	0/0:20,0:14:3.83:0,4,267	./.	./.	0/0:4,0:3:0.47:0,0,1	1/1:13,0:11:3.01:31,3,0	0/0:14,0:11:2.35:0,2,264	0/0:15,0:20:36.59:0,37,1736	0/0:10,0:10:15.05:0,15,410	./.
chr10	6786902	.	T	TC	1166.25	PASS	AB=0.967;AC=21;AF=0.389;AN=54;BaseQRankSum=2.299;DP=416;FS=8.684;HRun=0;HaplotypeScore=121.7193;InbreedingCoeff=0.2947;MQ=33.99;MQ0=31;MQRankSum=-0.712;QD=6.63;ReadPosRankSum=-3.294;VQSLOD=2.3752;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:31:8.59:0,9,146	1/1:4,0:4:8.76:95,9,0	0/0:19,0:6:15.05:0,15,195	0/0:17,0:4:8.95:0,9,122	1/1:14,1:15:5.82:90,6,0	0/0:16,0:11:24.06:0,24,306	0/0:22,0:18:6:0,6,83	0/1:15,2:16:99:278,0,99	0/0:17,0:14:11.88:0,12,194	0/1:18,0:15:49.92:270,0,50	0/1:12,0:12:0:0,0,0	0/1:6,1:7:28.76:60,0,29	1/1:11,0:10:14.11:187,14,0	0/1:11,0:10:27.85:97,0,28	1/1:12,0:12:2.37:8,2,0	0/0:27,0:23:39.59:0,40,518	0/0:14,0:11:12.04:0,12,155	0/1:9,0:5:37.61:38,0,70	0/0:13,0:10:30.08:0,30,383	0/0:20,0:16:18.50:0,19,249	./.	1/1:9,0:8:3.01:46,3,0	1/1:9,2:9:2.91:100,3,0	1/1:16,0:14:5.03:29,5,0	0/0:17,0:14:15.01:0,15,192	0/1:24,0:21:35.61:36,0,448	0/0:14,0:13:23.91:0,24,303	0/0:3,0:1:3.01:0,3,41
chr10	6786925	.	GTGTTTA	G	3230.05	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-0.876;DP=405;FS=26.282;HRun=0;HaplotypeScore=115.8576;InbreedingCoeff=0.9333;MQ=61.37;MQ0=20;MQRankSum=2.063;QD=27.85;ReadPosRankSum=7.424;VQSLOD=1.5583;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:28:54.65:0,55,819	0/0:9,0:9:22.49:0,22,377	0/0:32,0:18:51.51:0,52,939	0/0:27,0:16:15.06:0,15,755	0/0:17,0:17:44.77:0,45,621	1/1:12,0:10:27.09:412,27,0	1/1:14,2:14:20.33:336,20,0	0/0:14,0:13:39.13:0,39,576	1/1:12,0:10:18.06:284,18,0	0/0:19,0:17:37.13:0,37,618	0/0:9,0:9:27.05:0,27,353	0/0:11,0:11:21.68:0,22,365	0/0:15,0:14:26.39:0,26,420	0/0:13,0:13:36.12:0,36,541	0/0:12,0:12:36.11:0,36,491	1/1:22,0:21:53.24:730,53,0	1/1:9,1:10:21.07:336,21,0	0/0:8,0:5:6:0,6,68	1/1:14,0:12:36.10:543,36,0	1/1:15,0:15:33.10:504,33,0	0/0:4,0:3:3.01:0,3,52	0/0:8,0:8:24.08:0,24,385	0/0:17,0:17:48.98:0,49,786	0/0:14,0:13:29.89:0,30,399	1/1:12,2:13:20.99:291,21,0	0/0:16,0:15:11.21:0,11,358	0/0:7,0:7:16.28:0,16,277	0/0:6,0:4:12.04:0,12,200
chr10	6786927	.	GTTTA	G	4065.43	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-5.173;DP=403;FS=11.707;HRun=0;HaplotypeScore=105.2587;InbreedingCoeff=0.9453;MQ=63.39;MQ0=18;MQRankSum=4.105;QD=38.72;ReadPosRankSum=5.214;VQSLOD=2.9045;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:28:54.63:0,55,781	0/0:9,0:9:26.83:0,27,391	0/0:30,0:18:51.51:0,52,938	0/0:28,0:17:42.55:0,43,822	0/0:17,0:17:44.77:0,45,621	1/1:10,1:11:30.10:494,30,0	1/1:14,2:14:23.65:387,24,0	0/0:15,0:14:42.14:0,42,632	1/1:7,1:8:21.07:352,21,0	0/0:19,0:17:47.78:0,48,658	0/0:10,0:10:30.06:0,30,406	0/0:11,0:11:29.57:0,30,393	0/0:16,0:15:43.65:0,44,514	0/0:16,0:16:45.15:0,45,660	0/0:13,0:13:39.12:0,39,543	1/1:14,5:18:54.18:952,54,0	1/1:10,0:9:21.07:330,21,0	0/0:8,0:5:6.02:0,6,81	1/1:13,2:13:39.08:584,39,0	1/1:12,2:14:36.12:591,36,0	0/0:4,0:3:3.01:0,3,52	0/0:8,0:8:24.08:0,24,385	0/0:17,0:17:48.98:0,49,786	0/0:13,0:13:30.03:0,30,404	1/1:8,4:12:21.07:375,21,0	0/0:18,0:17:46.87:0,47,571	0/0:7,0:7:20.90:0,21,294	0/0:6,0:4:12.04:0,12,200
chr10	6787425	.	A	AAAAAAC	2175.99	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-2.784;DP=539;FS=2.043;HRun=0;HaplotypeScore=129.4406;InbreedingCoeff=0.9523;MQ=69.62;MQ0=15;MQRankSum=-6.785;QD=32.48;ReadPosRankSum=1.968;VQSLOD=3.6103;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:15.83:0,16,103	0/0:6,0:6:18.02:0,18,220	0/0:55,0:16:25.93:0,26,162	0/0:51,0:18:9.97:0,10,91	0/0:24,0:24:65.41:0,65,727	0/0:15,0:15:30.10:0,30,481	0/0:16,0:16:36.08:0,36,535	0/0:23,0:23:58.65:0,59,727	0/0:11,0:11:21.07:0,21,337	0/0:14,0:14:33.39:0,33,350	0/0:21,0:21:45.29:0,45,590	0/0:14,0:14:23.80:0,24,168	0/0:14,0:14:24.85:0,25,224	0/0:12,0:12:18.94:0,19,247	0/0:17,0:17:44.22:0,44,612	0/0:27,0:27:57.11:0,57,873	0/0:17,0:17:42.05:0,42,553	0/0:18,0:18:40.03:0,40,435	0/0:23,0:22:61.17:0,61,740	0/0:19,0:19:53.36:0,53,698	0/0:10,0:10:21.74:0,22,177	0/0:9,0:9:24.83:0,25,284	0/0:17,0:17:31.06:0,31,256	0/0:6,0:6:11.18:0,11,102	0/0:16,0:16:39.08:0,39,595	1/1:26,0:26:37.87:1174,38,0	1/1:11,15:31:29.40:815,29,0	1/1:9,0:8:17.79:329,18,0
chr10	6787430	.	A	AC	180.62	PASS	AB=0.743;AC=4;AF=0.071;AN=56;BaseQRankSum=6.114;DP=554;FS=0.698;HRun=0;HaplotypeScore=87.9047;InbreedingCoeff=0.4854;MQ=67.79;MQ0=16;MQRankSum=-4.640;QD=2.91;ReadPosRankSum=2.335;VQSLOD=2.8699;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:36.28:0,36,243	0/0:6,0:6:17.24:0,17,157	0/0:56,0:17:26.93:0,27,198	0/0:52,0:15:17.71:0,18,116	0/0:25,0:25:71.03:0,71,656	0/0:16,0:16:28.60:0,29,186	0/0:17,0:17:34.77:0,35,234	0/0:27,0:27:72.01:0,72,708	0/0:11,0:11:20.55:0,21,127	0/0:14,0:14:37.99:0,38,358	0/0:24,0:24:70.45:0,70,640	0/0:16,0:16:44.78:0,45,371	0/0:13,0:13:38.94:0,39,339	0/0:12,0:12:23.95:0,24,213	0/0:19,0:19:44.24:0,44,446	0/0:29,0:29:56.38:0,56,422	0/0:17,0:17:34.11:0,34,212	0/0:18,0:18:50.78:0,51,472	0/0:23,0:22:56.11:0,56,374	0/0:18,0:18:51.92:0,52,337	0/0:9,0:9:26.33:0,26,215	0/0:9,0:9:26.47:0,26,219	0/0:19,0:19:41.82:0,42,352	0/0:5,0:5:15.02:0,15,152	0/0:17,0:17:38.32:0,38,250	0/1:16,9:25:41.59:144,0,42	1/1:20,8:27:25.72:112,26,0	0/1:6,3:8:9.62:40,0,10
chr10	6787431	.	A	AAAAAC	1744.07	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=1.981;DP=552;FS=0.000;HRun=0;HaplotypeScore=117.3466;InbreedingCoeff=0.8591;MQ=68.74;MQ0=15;MQRankSum=-6.416;QD=22.36;ReadPosRankSum=2.886;VQSLOD=3.1930;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:19,0:19:1.22:70,0,1	0/0:6,0:6:18.01:0,18,195	0/0:56,0:18:13.12:0,13,147	0/0:51,0:15:5.05:0,5,68	0/0:25,0:25:65.48:0,65,687	0/0:16,0:16:30.04:0,30,293	0/0:17,0:17:35.53:0,36,330	0/0:26,0:26:64.27:0,64,703	0/0:11,0:11:21.02:0,21,196	0/0:14,0:14:33.36:0,33,338	0/0:23,0:23:58.55:0,59,640	0/0:16,0:16:31.53:0,32,233	0/0:14,0:14:28.61:0,29,239	0/0:12,0:12:21.40:0,21,229	0/0:19,0:19:50.25:0,50,584	0/0:29,0:29:53.56:0,54,516	0/0:17,0:17:29.42:0,29,276	0/0:19,0:19:48.87:0,49,471	0/0:24,0:23:42.93:0,43,407	0/0:20,0:20:45.42:0,45,411	0/0:9,0:9:22.11:0,22,173	0/0:9,0:9:22.83:0,23,239	0/0:19,0:19:30.42:0,30,257	0/0:5,0:5:14.76:0,15,148	0/0:17,0:17:38.54:0,39,344	1/1:14,9:24:43.01:902,43,0	1/1:18,8:25:30.10:619,30,0	1/1:6,3:8:20.63:301,21,0
chr10	6787432	.	A	AC	2804.46	PASS	AB=0.556;AC=17;AF=0.304;AN=56;BaseQRankSum=-9.972;DP=549;FS=14.022;HRun=0;HaplotypeScore=76.7641;InbreedingCoeff=0.9403;MQ=67.21;MQ0=15;MQRankSum=4.878;QD=16.31;ReadPosRankSum=7.150;VQSLOD=4.7439;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:4,1:20:1.35:70,0,1	0/0:6,0:6:17.23:0,17,154	0/0:54,0:16:16.04:0,16,160	0/0:50,0:15:17.01:0,17,118	0/0:25,0:25:70.98:0,71,647	1/1:1,15:16:27.95:287,28,0	1/1:1,16:18:32.75:337,33,0	0/0:26,0:26:71.98:0,72,697	1/1:0,12:12:21.06:229,21,0	0/0:14,0:14:37.98:0,38,353	0/0:23,0:23:68.90:0,69,635	0/0:15,0:15:41.84:0,42,349	0/0:14,0:14:41.94:0,42,361	0/0:12,0:12:23.95:0,24,209	0/0:19,0:19:47.37:0,47,464	1/1:3,24:28:33.59:476,34,0	1/1:1,15:16:24.98:313,25,0	0/0:19,0:19:53.49:0,53,482	1/1:5,18:23:34.59:497,35,0	1/1:3,17:20:22.11:427,22,0	0/0:9,0:9:25.87:0,26,203	0/0:9,0:9:26.54:0,27,209	0/0:19,0:19:41.80:0,42,343	0/0:5,0:5:15.03:0,15,153	1/1:2,16:18:24.95:377,25,0	0/0:22,0:22:51.16:0,51,215	0/0:26,0:25:22.51:0,23,74	0/0:9,0:8:19.71:0,20,76
chr10	6788243	.	GA	G	16219.04	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-0.445;DP=664;FS=33.036;HRun=7;HaplotypeScore=65.0171;InbreedingCoeff=0.9885;MQ=78.59;MQ0=0;MQRankSum=-6.040;QD=26.03;ReadPosRankSum=5.136;VQSLOD=2.9301;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,44:49:99:1255,123,0	1/1:2,7:9:18.04:184,18,0	0/0:15,0:14:21.15:0,21,346	0/0:26,0:25:39.09:0,39,517	1/1:2,25:27:60.12:611,60,0	1/1:1,20:21:54.12:551,54,0	1/1:1,11:12:24.05:245,24,0	1/1:2,36:38:99:1032,102,0	1/1:1,16:17:39.09:398,39,0	1/1:2,25:27:75.17:765,75,0	1/1:3,22:25:66.15:673,66,0	1/1:1,21:22:54.12:551,54,0	1/1:3,25:28:56.95:581,57,0	1/1:1,17:18:48.11:490,48,0	1/1:1,38:39:99:1102,108,0	1/1:0,21:21:57.13:582,57,0	1/1:2,21:23:60.13:612,60,0	1/1:0,14:14:36.08:367,36,0	1/1:0,30:30:90.16:902,90,0	1/1:2,23:25:63.14:643,63,0	1/1:2,26:28:66.15:673,66,0	1/1:3,16:19:48.11:490,48,0	1/1:3,19:22:48.10:490,48,0	1/1:2,27:29:75.17:765,75,0	1/1:0,16:16:45.10:459,45,0	1/1:1,29:30:87.17:879,87,0	1/1:0,25:25:72.16:735,72,0	1/1:1,8:9:18.04:184,18,0
chr10	6788434	.	T	TAA	7571.91	PASS	AB=0.885;AC=29;AF=0.537;AN=54;BaseQRankSum=-3.870;DP=503;FS=21.752;HRun=11;HaplotypeScore=74.4719;InbreedingCoeff=0.8745;MQ=71.37;MQ0=2;MQRankSum=1.270;QD=29.58;ReadPosRankSum=-2.399;VQSLOD=3.0273;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:36.05:0,36,509	1/1:1,6:9:23.93:285,24,0	0/0:14,0:12:1.07:0,1,130	0/0:17,0:11:7:0,7,109	1/1:2,19:23:65.70:899,66,0	0/0:21,0:21:54.02:0,54,522	0/0:8,0:8:21.03:0,21,204	1/1:5,23:29:69.21:959,69,0	0/0:13,0:17:44.29:0,44,385	1/1:1,23:26:60.32:945,60,0	1/1:2,23:27:67.40:855,67,0	1/1:3,11:15:33.02:416,33,0	1/1:1,11:14:35.09:452,35,0	1/1:3,12:14:24.08:348,24,0	1/1:2,22:24:66.22:956,66,0	0/0:26,0:25:63.04:0,63,605	0/0:19,0:21:47.72:0,48,491	1/1:4,11:15:23.07:345,23,0	0/0:24,0:24:54.04:0,54,514	0/0:23,0:24:44.95:0,45,480	1/1:0,7:7:18.06:261,18,0	1/1:1,9:13:27:335,27,0	1/1:1,5:8:21.06:278,21,0	1/1:1,5:8:17.03:191,17,0	0/0:17,0:17:21:0,21,369	0/1:19,2:23:48.24:48,0,314	0/0:30,0:30:83.78:0,84,785	./.
chr10	6788646	.	G	GT	2692.23	PASS	AB=0.719;AC=5;AF=0.089;AN=56;BaseQRankSum=6.223;DP=683;FS=1.384;HRun=4;HaplotypeScore=64.8360;InbreedingCoeff=-0.0998;MQ=66.61;MQ0=0;MQRankSum=-9.349;QD=11.97;ReadPosRankSum=0.783;VQSLOD=1.4242;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:63.18:0,63,715	0/0:6,0:6:18.05:0,18,204	0/0:9,0:9:27.08:0,27,304	0/0:5,0:5:12.03:0,12,136	0/0:31,0:31:90.22:0,90,1000	0/0:36,0:36:99:0,105,1172	0/0:16,0:16:45.13:0,45,511	0/0:31,0:31:78.22:0,78,885	0/0:22,0:22:57.16:0,57,646	0/1:33,7:40:99:135,0,933	0/1:38,13:52:99:327,0,1012	0/0:28,0:28:78.20:0,78,873	0/0:20,0:20:54.15:0,54,613	0/0:26,0:26:75.21:0,75,851	0/0:26,0:26:66.19:0,66,749	0/0:24,0:24:69.13:0,69,744	0/0:14,0:14:30.08:0,30,340	0/0:11,0:11:27.08:0,27,306	0/0:27,0:27:66.16:0,66,736	0/0:24,0:24:69.20:0,69,782	0/0:17,0:17:51.15:0,51,579	0/0:17,0:17:51.13:0,51,568	0/0:17,0:17:51.13:0,51,568	0/0:12,0:12:36.10:0,36,408	0/0:16,0:16:39.11:0,39,442	0/1:25,20:45:99:710,0,650	0/1:34,32:65:99:1046,0,871	0/1:6,16:22:99:592,0,107
chr10	6788748	.	TAA	T	8327.58	PASS	AB=0.773;AC=36;AF=0.643;AN=56;BaseQRankSum=-6.172;DP=571;FS=3.377;HRun=12;HaplotypeScore=103.6615;InbreedingCoeff=0.8272;MQ=67.66;MQ0=1;MQRankSum=-1.856;QD=20.26;ReadPosRankSum=-0.062;VQSLOD=4.2980;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:2,0:14:27.45:0,27,97	1/1:3,9:13:19.58:187,20,0	0/0:12,0:12:12.54:0,13,176	0/1:7,0:6:13.37:41,0,13	1/1:0,21:22:59.85:592,60,0	0/0:2,0:20:37.43:0,37,132	0/0:1,0:9:17.47:0,17,61	1/1:5,21:26:63.10:634,63,0	0/0:2,1:19:9.92:0,10,101	1/1:5,21:35:87.81:742,88,0	1/1:2,18:30:75.53:607,76,0	1/1:1,23:25:53.37:601,53,0	1/1:2,14:16:33.06:335,33,0	1/1:4,13:17:39.07:397,39,0	1/1:3,14:18:38.81:378,39,0	0/0:6,0:15:25.47:0,25,124	0/1:2,2:12:37.55:38,0,38	1/1:3,19:22:48.10:488,48,0	0/0:6,1:24:14.79:0,15,118	0/0:4,0:26:44.58:0,45,210	1/1:0,11:11:27.06:275,27,0	1/1:2,14:16:30:305,30,0	1/1:2,14:16:33.07:336,33,0	1/1:1,11:12:27.06:275,27,0	0/0:3,1:19:14.53:0,15,99	1/1:6,19:36:90.29:734,90,0	1/1:13,29:63:99:1164,148,0	1/1:4,5:13:25.96:200,26,0
chr10	6789136	.	G	GAAGGAAAGCTAATGATGTAAA	21057.07	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=5.624;DP=605;FS=9.442;HRun=0;HaplotypeScore=315.9251;InbreedingCoeff=0.9153;MQ=80.12;MQ0=0;MQRankSum=-11.428;QD=106.35;ReadPosRankSum=-7.374;VQSLOD=2.2685;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:15.05:0,15,613	1/1:7,0:7:3.01:158,3,0	0/0:21,0:21:24.55:0,25,645	0/0:18,0:18:24.04:0,24,630	1/1:30,3:38:63.09:3015,63,0	0/0:27,0:27:63.22:0,63,3000	0/0:20,0:20:39.13:0,39,2082	1/1:55,0:55:99:7201,120,0	0/0:18,0:18:48.15:0,48,2412	1/1:18,3:24:51.13:4126,51,0	1/1:24,3:29:45.07:2315,45,0	0/0:23,0:23:48.16:0,48,2609	0/0:21,0:21:45.15:0,45,2302	0/0:19,0:19:51.18:0,51,2548	1/1:21,3:24:27.09:2376,27,0	0/0:29,0:29:66.21:0,66,3347	0/0:13,0:13:39.11:0,39,1934	0/1:6,0:6:0.69:435,0,1	0/0:13,0:13:24.08:0,24,937	0/0:24,0:24:63.22:0,63,3220	1/1:12,3:15:18.06:1432,18,0	0/0:19,0:19:42.14:0,42,2314	0/0:24,0:24:45.15:0,45,2310	0/0:17,0:17:39.13:0,39,2034	0/0:19,0:19:48.14:0,48,2223	0/0:32,0:32:60.20:0,60,3148	0/0:33,0:33:72.25:0,72,3564	0/0:8,0:8:24.08:0,24,1217
chr10	6789323	.	AT	A	3457.31	PASS	AB=0.875;AC=29;AF=0.518;AN=56;BaseQRankSum=2.072;DP=344;FS=2.228;HRun=1;HaplotypeScore=51.1540;InbreedingCoeff=0.8520;MQ=88.29;MQ0=1;MQRankSum=-1.337;QD=20.95;ReadPosRankSum=-4.812;VQSLOD=2.3405;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:20.85:0,21,257	1/1:2,1:3:8.98:89,9,0	0/0:36,1:25:41.94:0,42,538	0/0:21,0:17:25.34:0,25,225	1/1:2,17:19:47.84:455,48,0	0/0:11,0:11:33.06:0,33,409	0/0:9,0:9:21.64:0,22,278	1/1:2,20:21:57.88:585,58,0	0/1:6,1:7:39.65:40,0,72	1/1:12,2:14:36.12:376,36,0	1/1:1,11:12:20.63:160,21,0	1/1:12,2:14:35.39:317,35,0	1/1:1,10:11:5.95:42,6,0	1/1:10,2:12:29.87:267,30,0	1/1:16,1:17:41.57:375,42,0	0/0:18,0:18:24.95:0,25,563	0/0:8,0:8:18.04:0,18,227	1/1:0,4:4:3.01:38,3,0	0/0:9,0:9:26.04:0,26,266	0/0:9,0:9:21.23:0,21,315	1/1:9,3:12:25.74:254,26,0	1/1:0,4:4:11.87:80,12,0	1/1:10,0:10:28.18:245,28,0	1/1:4,0:4:12.02:137,12,0	0/0:12,0:10:17.19:0,17,330	0/0:15,0:15:7.18:0,7,339	0/0:16,0:16:26.60:0,27,299	0/0:4,0:4:11.99:0,12,103
chr10	6789343	.	G	GA	1183	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=-6.531;DP=317;FS=2.127;HRun=0;HaplotypeScore=71.7625;InbreedingCoeff=0.7595;MQ=77.02;MQ0=2;MQRankSum=-0.406;QD=7.94;ReadPosRankSum=-0.935;VQSLOD=3.0529;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:22.04:0,22,148	1/1:2,1:3:8.97:71,9,0	0/0:31,0:13:8.44:0,8,160	0/0:19,0:16:27.06:0,27,228	1/1:13,2:15:0.77:112,1,0	0/0:12,0:12:26:0,26,182	0/0:11,0:11:23.51:0,24,163	1/1:9,2:11:22.78:183,23,0	0/0:10,0:10:14.55:0,15,121	1/1:2,12:14:24.32:255,24,0	1/1:9,1:10:19.87:156,20,0	1/1:1,0:10:12.47:106,12,0	1/1:5,0:7:11.99:112,12,0	1/1:2,0:13:6.01:62,6,0	1/1:4,13:17:7.99:60,8,0	0/0:17,0:17:27.38:0,27,164	0/0:8,0:8:13.12:0,13,90	1/1:2,0:2:2.76:21,3,0	0/0:8,0:8:15.25:0,15,99	0/0:3,0:3:3:0,3,26	1/1:3,10:13:2.97:38,3,0	1/1:4,0:4:8.98:71,9,0	1/1:2,0:9:5.30:29,5,0	1/1:5,0:5:14.85:108,15,0	0/0:9,0:8:13.60:0,14,75	0/1:16,0:16:2.04:2,0,201	0/0:23,0:23:49.54:0,50,317	0/0:5,0:5:14.78:0,15,105
chr10	6789361	.	GAACA	G	4409.11	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=0.556;DP=321;FS=18.498;HRun=0;HaplotypeScore=63.1543;InbreedingCoeff=0.9553;MQ=84.43;MQ0=1;MQRankSum=-8.215;QD=54.43;ReadPosRankSum=2.686;VQSLOD=4.3249;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:30.57:0,31,863	0/0:5,0:5:15.05:0,15,430	0/0:14,0:10:27.07:0,27,681	0/0:18,0:18:29.98:0,30,948	0/0:15,0:15:45.11:0,45,1208	1/1:1,13:14:30.10:627,30,0	1/1:0,9:9:21.07:438,21,0	0/0:16,0:16:42.14:0,42,1198	1/1:0,8:8:21.07:439,21,0	0/0:14,0:14:42.13:0,42,1132	0/0:12,0:12:36.12:0,36,951	0/0:10,0:10:18.03:0,18,406	0/0:9,0:9:23.94:0,24,695	0/0:15,0:15:18.06:0,18,502	0/0:21,0:21:27.02:0,27,649	1/1:0,15:15:42.14:861,42,0	1/1:0,9:9:27.09:563,27,0	0/0:2,0:2:6.02:0,6,174	1/1:0,9:9:27.09:549,27,0	1/1:0,6:6:15.05:305,15,0	0/0:8,0:8:9.03:0,9,260	0/0:8,0:8:24.08:0,24,663	0/0:9,0:9:14.41:0,14,340	0/0:5,0:5:15.05:0,15,433	1/1:0,11:11:30.10:627,30,0	0/0:16,0:16:45.15:0,45,1304	0/0:25,0:25:75.26:0,75,2153	0/0:6,0:6:18.06:0,18,522
chr10	6789478	.	AGCTATGTTTCTCAT	A	16047.21	PASS	AB=0.947;AC=29;AF=0.518;AN=56;BaseQRankSum=16.516;DP=560;FS=6.672;HRun=0;HaplotypeScore=213.8063;InbreedingCoeff=0.8750;MQ=93.22;MQ0=0;MQRankSum=-13.695;QD=62.93;ReadPosRankSum=3.360;VQSLOD=3.5136;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:75.26:0,75,4818	1/1:0,4:4:9.03:380,9,0	0/0:30,0:30:78.27:0,78,4095	0/0:27,0:27:81.28:0,81,3820	1/1:5,19:24:50.81:1383,51,0	0/0:19,0:19:54.19:0,54,3435	0/0:30,0:30:84.29:0,84,5278	1/1:6,17:23:51.07:1484,51,0	0/0:15,0:15:42.13:0,42,2328	1/1:3,21:24:60.09:2111,60,0	1/1:1,14:15:21.03:763,21,0	1/1:2,18:20:45.11:1792,45,0	1/1:3,12:15:24.08:988,24,0	1/1:2,16:18:42.14:1758,42,0	1/1:2,28:30:42.14:1759,42,0	0/0:28,0:28:84.27:0,84,5222	0/0:31,0:31:93.31:0,93,5945	1/1:0,4:4:3.01:127,3,0	0/0:16,0:16:48.16:0,48,2798	0/0:25,0:25:72.25:0,72,4246	1/1:5,17:22:14.94:299,15,0	1/1:0,7:7:12.04:506,12,0	1/1:2,21:23:57.20:2371,57,0	1/1:1,7:8:6.02:254,6,0	0/0:16,0:15:45.15:0,45,2718	0/1:17,1:18:72.47:72,0,3246	0/0:33,0:33:99:0,99,6282	0/0:9,0:9:24.08:0,24,1555
chr10	6789841	.	TA	T	101.40	PASS	AB=0.937;AC=13;AF=0.232;AN=56;BaseQRankSum=-3.656;DP=531;FS=6.003;HRun=18;HaplotypeScore=142.1835;InbreedingCoeff=-0.0062;MQ=55.48;MQ0=10;MQRankSum=-0.082;QD=0.42;ReadPosRankSum=4.474;VQSLOD=-0.7053;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:12,4:15:34.24:34,0,38	0/0:9,0:9:13.34:0,13,62	0/1:46,0:7:2.30:2,0,22	0/1:39,0:16:10.52:11,0,11	0/0:25,3:27:12.23:0,12,112	0/1:19,1:20:8.98:39,0,9	1/1:12,0:12:2.96:18,3,0	0/0:30,0:30:36.33:0,36,201	0/1:11,2:14:26.80:27,0,33	0/0:22,0:23:20.66:0,21,125	0/0:25,0:26:31.20:0,31,181	0/0:17,1:18:14.15:0,14,99	0/0:17,0:18:12.76:0,13,98	0/0:19,0:19:28.65:0,29,126	0/0:14,0:15:2.67:0,3,37	0/1:24,0:24:10.56:11,0,55	0/0:10,1:11:0.27:0,0,39	0/0:4,0:4:5.69:0,6,30	0/1:22,2:24:31.50:32,0,32	0/1:14,0:15:2.85:3,0,22	0/0:4,0:4:2.37:0,2,8	0/0:9,0:8:9.03:0,9,44	0/0:20,0:20:21.65:0,22,123	0/0:5,0:5:2.80:0,3,13	0/0:20,1:20:11.46:0,11,70	0/0:24,3:26:3.40:0,3,126	1/1:14,4:17:4.39:57,4,0	0/1:11,0:10:1.83:2,0,26
chr10	6789854	.	A	AAAAGAAC	9962.41	PASS	AB=0.929;AC=36;AF=0.643;AN=56;BaseQRankSum=-0.908;DP=577;FS=46.196;HRun=0;HaplotypeScore=133.8721;InbreedingCoeff=-0.3645;MQ=46.05;MQ0=14;MQRankSum=-3.339;QD=18.94;ReadPosRankSum=1.525;VQSLOD=2.7307;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:21:17.33:492,0,17	0/1:3,2:8:0.72:277,0,1	0/1:63,0:12:4.96:5,0,96	0/0:51,0:14:24.70:0,25,116	0/1:21,1:22:26.43:465,0,26	1/1:18,1:20:24.34:420,24,0	0/1:12,0:12:1.46:220,0,1	0/1:29,5:33:88.70:882,0,89	0/1:18,0:20:74.30:339,0,74	1/1:15,2:19:10.89:757,11,0	0/1:25,1:26:22.98:383,0,23	0/1:19,0:19:87.93:304,0,88	0/1:15,0:14:48.17:224,0,48	0/1:18,1:19:99:325,0,111	1/1:17,0:17:28.84:218,29,0	0/1:23,2:28:66.81:813,0,67	1/1:8,0:12:24.95:329,25,0	0/1:9,0:8:34:64,0,34	0/1:25,0:25:67.62:472,0,68	1/1:17,0:18:15.93:363,16,0	1/1:4,0:4:4.83:53,5,0	0/1:6,1:6:5.68:229,0,6	0/1:20,1:21:25.19:251,0,25	1/1:2,2:5:1.48:16,1,0	0/1:19,0:20:23.93:621,0,24	1/1:26,0:27:7.10:749,7,0	0/1:19,0:19:40.18:331,0,40	1/1:9,0:9:21.01:362,21,0
chr10	6789857	.	A	AG	893.21	PASS	AB=0.938;AC=23;AF=0.411;AN=56;BaseQRankSum=1.806;DP=582;FS=11.976;HRun=0;HaplotypeScore=115.4255;InbreedingCoeff=-0.5164;MQ=44.51;MQ0=14;MQRankSum=-0.634;QD=2.19;ReadPosRankSum=1.960;VQSLOD=2.0179;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:23:48.83:49,0,58	1/1:7,0:7:1.43:6,1,0	0/0:61,0:11:19.83:0,20,129	0/0:50,0:13:9.54:0,10,100	0/1:22,3:24:67.90:68,0,83	0/1:15,1:16:10.92:59,0,11	0/1:10,0:13:26.76:27,0,70	0/1:32,3:34:99:99,0,145	0/1:24,0:25:35.30:35,0,54	0/1:16,1:17:38.03:111,0,38	0/1:25,0:25:13.97:14,0,180	0/1:20,1:20:51.04:51,0,94	0/1:15,0:14:40.50:40,0,82	0/1:16,2:18:68.49:68,0,109	0/1:19,0:19:44.24:55,0,44	0/1:25,1:28:84.83:101,0,85	0/1:12,0:12:0.20:0,0,69	0/0:9,0:8:10.77:0,11,61	0/0:28,0:29:18.07:0,18,314	0/1:18,1:20:3.24:98,0,3	0/1:4,0:4:0.47:0,0,11	0/1:6,1:6:20.42:20,0,30	0/1:17,0:17:47.13:47,0,97	0/0:5,0:5:2.50:0,3,7	0/1:19,0:20:35.34:35,0,138	0/1:27,1:28:15.54:16,0,300	0/0:20,0:19:28.05:0,28,249	0/1:8,1:9:40.96:41,0,64
chr10	6789860	.	GA	G	945.16	PASS	AB=0.766;AC=12;AF=0.214;AN=56;BaseQRankSum=-0.389;DP=572;FS=32.914;HRun=18;HaplotypeScore=112.6267;InbreedingCoeff=-0.0900;MQ=44.81;MQ0=13;MQRankSum=-2.161;QD=4.34;ReadPosRankSum=2.017;VQSLOD=-0.3835;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:22:20.54:0,21,94	0/0:7,0:7:12.17:0,12,73	0/0:57,0:11:14.09:0,14,103	0/0:47,0:10:11.71:0,12,94	0/0:13,0:24:33.52:0,34,168	0/1:13,2:15:31.18:31,0,42	0/1:5,7:12:26.76:68,0,27	0/0:34,0:37:55.27:0,55,310	0/1:22,2:25:17.04:17,0,58	0/0:8,0:16:33.08:0,33,178	0/0:22,0:27:41.26:0,41,202	0/0:18,0:19:23.72:0,24,125	0/0:11,0:13:16.65:0,17,84	0/0:16,0:18:21.32:0,21,124	0/0:3,0:18:11.29:0,11,61	0/1:22,5:27:58.22:58,0,91	0/1:4,9:13:8.79:102,0,9	0/0:7,0:9:11.93:0,12,57	0/1:12,14:26:13.43:235,0,13	0/1:8,0:22:25.83:78,0,26	0/0:1,0:5:2.84:0,3,14	0/0:4,0:6:8.74:0,9,51	0/0:12,1:17:20.63:0,21,91	0/0:3,0:5:0.47:0,0,1	0/1:12,8:19:89.91:90,0,95	0/1:19,8:28:94.12:174,0,94	1/1:13,6:18:3.01:147,3,0	0/1:5,5:9:14.08:91,0,14
chr10	6789861	.	A	AACAAAAAG	9571.52	PASS	AB=0.956;AC=36;AF=0.643;AN=56;BaseQRankSum=-5.148;DP=578;FS=36.088;HRun=0;HaplotypeScore=143.4032;InbreedingCoeff=-0.3419;MQ=45.62;MQ0=13;MQRankSum=-5.026;QD=20.24;ReadPosRankSum=2.213;VQSLOD=2.8341;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:22:11.02:639,0,11	0/1:7,0:7:20.79:180,0,21	0/0:57,0:11:19.90:0,20,154	0/0:48,0:11:21.98:0,22,148	0/1:24,0:23:41.84:282,0,42	1/1:8,5:15:26.76:522,27,0	1/1:12,0:12:8.40:331,8,0	0/1:38,0:37:99:518,0,188	0/1:10,16:26:67.12:451,0,67	0/1:16,0:16:13.79:325,0,14	0/1:27,0:27:95.76:157,0,96	0/1:20,0:19:99:115,0,195	0/1:15,0:14:91.95:97,0,92	0/1:18,0:18:99:154,0,128	1/1:18,0:18:1.58:53,2,0	0/1:18,8:29:8.88:947,0,9	1/1:13,0:13:6.59:443,7,0	0/1:10,0:9:37.79:38,0,55	0/1:25,0:25:13.77:694,0,14	1/1:20,1:21:6.70:480,7,0	1/1:5,0:5:3:34,3,0	0/1:7,0:6:10.19:166,0,10	0/1:19,0:19:99:108,0,120	1/1:5,0:5:1.07:3,1,0	0/1:19,0:19:47.39:842,0,47	1/1:30,0:29:16.23:952,16,0	1/1:20,0:19:0.31:589,0,0	1/1:10,0:9:3.43:452,3,0
chr10	6789862	.	A	ACAAAAAG	6672.72	PASS	AB=0.957;AC=30;AF=0.536;AN=56;BaseQRankSum=-0.044;DP=582;FS=16.567;HRun=0;HaplotypeScore=146.9159;InbreedingCoeff=-0.5083;MQ=45.94;MQ0=13;MQRankSum=-4.798;QD=14.05;ReadPosRankSum=2.517;VQSLOD=3.0246;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:7,15:27:9.52:812,0,10	0/1:7,0:7:20.79:122,0,21	0/0:55,0:11:17.22:0,17,158	0/0:47,0:11:24.85:0,25,212	0/1:23,0:23:85.71:227,0,86	1/1:14,1:15:26.73:450,27,0	1/1:12,0:12:8.29:204,8,0	0/1:37,0:37:99:333,0,307	0/1:26,0:26:66.71:378,0,67	0/1:16,0:17:40.31:185,0,40	0/1:26,0:27:36.94:37,0,190	0/1:20,0:19:78.24:78,0,247	0/1:14,0:14:60.64:61,0,159	0/1:18,0:18:90.10:90,0,217	0/1:18,0:18:16.20:20,0,16	0/1:27,0:27:11.21:713,0,11	1/1:13,0:13:3.30:251,3,0	0/1:8,0:9:24.80:25,0,82	0/1:25,0:25:44.82:332,0,45	0/1:20,0:21:11.57:313,0,12	1/1:5,0:5:2.95:19,3,0	0/1:8,0:7:10.26:138,0,10	0/1:20,0:20:49.90:50,0,229	0/0:5,0:5:3.54:0,4,12	0/1:20,0:19:63.80:601,0,64	0/1:31,0:30:33.75:600,0,34	0/1:21,0:20:30.86:340,0,31	1/1:10,0:9:3.41:292,3,0
chr10	6790619	.	GGA	G	19893.29	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-2.369;DP=632;FS=12.642;HRun=0;HaplotypeScore=98.3324;InbreedingCoeff=0.9968;MQ=80.93;MQ0=2;MQRankSum=-8.151;QD=33.77;ReadPosRankSum=6.110;VQSLOD=6.6847;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,23:23:45.15:660,45,0	1/1:0,10:10:27.09:397,27,0	0/0:27,0:26:51.73:0,52,633	0/0:16,0:15:23.14:0,23,286	1/1:2,41:43:99:1479,114,0	1/1:4,22:26:66.18:913,66,0	1/1:3,13:16:33.10:466,33,0	1/1:4,20:24:64.30:762,64,0	1/1:6,10:16:43.35:540,43,0	1/1:4,21:25:75.23:1025,75,0	1/1:2,22:24:57.04:785,57,0	1/1:2,23:25:57.06:808,57,0	1/1:2,22:24:57.18:819,57,0	1/1:2,17:19:36.08:529,36,0	1/1:2,31:33:75.25:1102,75,0	1/1:1,21:22:51.16:732,51,0	1/1:1,18:18:39.13:573,39,0	1/1:1,13:13:29.69:405,30,0	1/1:1,13:14:39.11:535,39,0	1/1:0,35:35:99:1377,105,0	1/1:0,18:18:30.10:441,30,0	1/1:4,25:29:74.67:970,75,0	1/1:0,20:20:54.18:793,54,0	1/1:1,15:16:42.14:617,42,0	1/1:2,17:19:42.14:617,42,0	1/1:6,27:33:89.81:1184,90,0	1/1:1,32:33:66.22:968,66,0	1/1:0,9:9:27.09:396,27,0
chr10	6790620	.	GAGA	G	5797.81	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=2.847;DP=617;FS=13.619;HRun=0;HaplotypeScore=157.0678;InbreedingCoeff=0.8487;MQ=80.15;MQ0=2;MQRankSum=-7.049;QD=10.07;ReadPosRankSum=7.000;VQSLOD=3.2146;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:23:40.09:163,40,0	1/1:10,0:10:24.11:98,24,0	0/0:25,0:24:50.58:0,51,767	0/0:14,0:15:1.75:0,2,347	1/1:43,0:43:69.04:427,69,0	1/1:23,2:25:59.92:361,60,0	1/1:13,1:14:29.86:162,30,0	1/1:23,1:24:48.32:326,48,0	1/1:15,1:16:37.67:233,38,0	1/1:25,0:25:65.19:332,65,0	1/1:23,0:23:17.91:181,18,0	1/1:25,0:25:41.73:186,42,0	1/1:23,1:24:51.22:248,51,0	1/1:18,0:18:30.39:128,30,0	1/1:31,0:31:66.96:272,67,0	1/1:21,1:22:45.86:227,46,0	1/1:19,0:18:34.82:141,35,0	1/1:14,0:13:21.37:92,21,0	1/1:13,1:14:35.28:171,35,0	1/1:35,0:35:89.41:407,89,0	1/1:18,0:18:9.99:89,10,0	1/1:28,0:28:62.68:292,63,0	1/1:20,0:20:48.21:196,48,0	1/1:15,0:15:37.50:152,37,0	1/1:17,0:17:37.50:153,37,0	1/1:29,2:31:75.42:426,75,0	1/1:33,0:33:58.92:238,59,0	1/1:9,0:9:24.11:98,24,0
chr10	6790621	.	AG	A	9446.96	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=1.666;DP=622;FS=9.450;HRun=2;HaplotypeScore=124.9127;InbreedingCoeff=0.9966;MQ=80.53;MQ0=2;MQRankSum=-6.986;QD=16.29;ReadPosRankSum=6.305;VQSLOD=4.2602;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:25:44.34:291,44,0	1/1:10,0:10:26.60:175,27,0	0/0:26,1:26:60.96:0,61,592	0/0:15,0:14:23.24:0,23,224	1/1:42,1:43:96.74:725,97,0	1/1:25,0:25:65.04:428,65,0	1/1:14,0:14:32.53:214,33,0	1/1:22,1:23:58.10:409,58,0	1/1:15,0:15:44.26:312,44,0	1/1:27,0:27:56.69:506,57,0	1/1:23,0:23:56.12:366,56,0	1/1:25,0:25:46.54:340,47,0	1/1:23,1:24:56.19:370,56,0	1/1:18,1:19:36.36:235,36,0	1/1:31,0:31:73.90:486,74,0	1/1:22,0:22:50.27:332,50,0	1/1:18,0:17:38.43:252,38,0	1/1:13,1:13:29.61:216,30,0	1/1:16,0:16:44.45:310,44,0	1/1:35,0:35:99:687,104,0	1/1:18,0:18:29.56:194,30,0	1/1:25,2:27:74:510,74,0	1/1:20,0:20:53.21:350,53,0	1/1:15,0:15:41.38:272,41,0	1/1:17,0:17:41.38:272,41,0	1/1:30,1:31:88.74:614,89,0	1/1:34,0:34:46.29:405,46,0	1/1:9,0:9:26.60:175,27,0
chr10	6790749	.	C	CT	7311.61	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-15.621;DP=672;FS=0.665;HRun=3;HaplotypeScore=58.1239;InbreedingCoeff=0.9986;MQ=86.44;MQ0=0;MQRankSum=-7.112;QD=36.74;ReadPosRankSum=0.388;VQSLOD=5.2374;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:33:96.27:0,96,1138	1/1:1,11:12:33.11:462,33,0	0/0:30,0:30:76.96:0,77,957	0/0:22,0:21:40.96:0,41,643	1/1:0,30:30:87.18:1172,87,0	0/0:22,0:22:63.18:0,63,746	0/0:24,0:24:72.22:0,72,863	1/1:3,27:30:77.96:1040,78,0	0/0:18,0:18:54.17:0,54,648	1/1:3,21:25:66.21:899,66,0	1/1:1,29:30:87.29:1218,87,0	0/0:31,0:31:87.24:0,87,1031	0/0:31,0:31:84.26:0,84,1008	0/0:19,0:19:57.17:0,57,684	1/1:2,26:29:72.24:1008,72,0	0/0:23,0:23:69.20:0,69,817	0/0:29,0:29:81.23:0,81,958	1/1:1,19:20:48.16:672,48,0	0/0:17,0:17:51.14:0,51,601	0/0:28,0:28:84.24:0,84,995	1/1:0,23:23:60.20:840,60,0	0/0:23,0:23:63.09:0,63,736	0/0:20,0:20:57.11:0,57,666	0/0:13,0:13:39.12:0,39,467	0/0:27,0:27:75.19:0,75,867	0/0:25,0:25:75.21:0,75,881	0/0:31,0:31:90.28:0,90,1080	0/0:6,0:6:18.05:0,18,214
chr10	6790993	.	TA	T	11532.58	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-5.454;DP=515;FS=6.666;HRun=9;HaplotypeScore=55.9116;InbreedingCoeff=0.9281;MQ=72.08;MQ0=0;MQRankSum=-4.841;QD=23.39;ReadPosRankSum=4.758;VQSLOD=5.4956;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,16:19:45.02:412,45,0	1/1:0,6:6:18.01:165,18,0	0/0:14,0:13:28.33:0,28,249	0/0:8,0:8:20.71:0,21,178	1/1:4,31:35:92.81:815,93,0	1/1:2,13:15:39.01:357,39,0	1/1:2,9:11:21.01:192,21,0	1/1:6,22:28:66:597,66,0	1/1:2,11:13:33.02:302,33,0	1/1:6,21:27:63:571,63,0	1/1:1,34:35:99:911,102,0	1/1:1,12:13:13.24:255,13,0	1/1:1,23:24:63.03:576,63,0	1/1:1,11:12:30.01:275,30,0	1/1:0,23:23:66.04:604,66,0	1/1:1,11:12:33.02:302,33,0	1/1:1,17:18:45.02:412,45,0	1/1:0,12:12:33.02:302,33,0	1/1:1,12:13:38.96:348,39,0	1/1:1,30:31:86.89:774,87,0	1/1:2,6:8:15.01:137,15,0	1/1:0,14:14:38.97:349,39,0	1/1:1,25:26:59.56:549,60,0	1/1:0,5:5:12.01:110,12,0	1/1:3,29:32:81.04:741,81,0	1/1:1,23:24:69.02:626,69,0	1/1:3,30:33:84.04:768,84,0	1/1:1,3:4:9:82,9,0
chr10	6791373	.	GA	G	3770.58	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=-7.098;DP=626;FS=0.828;HRun=8;HaplotypeScore=102.5159;InbreedingCoeff=0.9006;MQ=65.34;MQ0=66;MQRankSum=1.369;QD=11.71;ReadPosRankSum=2.662;VQSLOD=2.8155;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:33:52.31:0,52,240	1/1:0,8:8:17.97:154,18,0	0/0:39,0:24:56.81:0,57,623	0/0:37,0:27:55.25:0,55,626	1/1:4,15:14:32.20:265,32,0	0/0:28,0:27:45.26:0,45,237	0/0:30,0:27:42.23:0,42,222	1/1:24,3:20:41.93:377,42,0	0/0:17,0:15:18.29:0,18,76	1/1:5,13:13:38.79:309,39,0	1/1:4,8:6:14.95:120,15,0	1/1:6,12:14:26.31:253,26,0	1/1:10,21:21:45.05:424,45,0	1/1:8,15:18:27.02:254,27,0	1/1:6,17:17:26.08:218,26,0	0/0:20,0:19:39.62:0,40,212	0/0:30,0:30:62.66:0,63,339	1/1:3,14:9:17.98:154,18,0	0/0:11,0:10:4.88:0,5,27	0/1:21,0:20:13.95:20,0,14	1/1:11,23:19:27.02:251,27,0	1/1:5,19:17:44.87:403,45,0	1/1:9,10:13:18.02:172,18,0	1/1:8,20:23:42.05:396,42,0	0/0:19,0:19:35.30:0,35,154	0/0:13,0:13:27.25:0,27,145	0/0:14,0:12:18.96:0,19,89	0/0:11,0:9:10.98:0,11,48
chr10	6791379	.	AAACAC	A	2345.72	PASS	AB=0.987;AC=19;AF=0.339;AN=56;BaseQRankSum=-5.049;DP=708;FS=15.085;HRun=0;HaplotypeScore=156.8811;InbreedingCoeff=0.2887;MQ=54.15;MQ0=114;MQRankSum=1.497;QD=6.24;ReadPosRankSum=1.243;VQSLOD=2.0306;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:36:53.82:0,54,569	1/1:10,0:10:18.28:161,18,0	0/0:37,0:21:57.08:0,57,648	0/0:33,0:21:47:0,47,680	1/1:22,0:14:35.26:376,35,0	0/0:27,0:26:47.58:0,48,808	0/0:28,0:25:46.60:0,47,672	1/1:16,19:22:41.91:434,42,0	0/0:17,0:14:21.65:0,22,261	0/1:28,0:19:31.84:207,0,32	0/1:16,0:10:19.71:142,0,20	0/1:27,0:21:66.31:66,0,185	0/1:36,0:26:64.66:65,0,184	0/1:30,0:23:99:121,0,149	0/1:33,0:24:54.78:234,0,55	0/0:18,0:19:42.20:0,42,738	0/0:29,0:29:71.08:0,71,987	1/1:20,0:9:18.04:142,18,0	0/0:17,0:11:24.81:0,25,172	0/0:21,0:19:33.37:0,33,281	1/1:43,0:21:26.63:248,27,0	0/1:30,0:22:94.11:94,0,259	0/1:14,0:9:6.75:7,0,92	0/1:29,0:20:35.47:238,0,35	0/0:20,0:19:35.73:0,36,402	0/0:12,0:11:31.39:0,31,594	0/0:17,0:15:29.10:0,29,350	0/0:13,0:10:14.20:0,14,144
chr10	6791380	.	A	AC	1904.64	PASS	AB=0.962;AC=29;AF=0.518;AN=56;BaseQRankSum=4.607;DP=744;FS=0.819;HRun=0;HaplotypeScore=148.1861;InbreedingCoeff=0.0211;MQ=53.10;MQ0=114;MQRankSum=1.516;QD=3.32;ReadPosRankSum=7.105;VQSLOD=2.9272;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:37:47.91:0,48,144	1/1:10,0:10:8.15:85,8,0	0/0:37,0:21:56.38:0,56,618	0/0:33,0:21:55.33:0,55,630	1/1:21,1:14:12.35:60,12,0	0/1:29,0:28:12.51:16,0,13	0/1:30,0:27:27.53:28,0,48	1/1:34,1:22:17.95:278,18,0	0/1:24,0:21:4.22:36,0,4	0/1:25,3:19:18.29:101,0,18	0/1:14,1:9:21.51:22,0,26	0/1:25,2:21:44.32:80,0,44	0/1:35,2:26:31.64:159,0,32	0/1:29,1:23:65.09:119,0,65	0/1:32,1:24:33.07:52,0,33	0/1:22,2:23:3.79:59,0,4	0/1:30,0:30:0.44:0,0,70	0/1:20,0:9:3.86:57,0,4	0/0:17,0:11:5.50:0,5,64	0/0:21,0:19:41.15:0,41,162	1/1:39,4:21:23.78:210,24,0	0/1:27,4:23:1.07:166,0,1	1/1:12,3:9:0.11:23,0,0	1/1:29,1:20:34.28:262,34,0	0/0:22,0:21:0.51:0,1,38	1/1:19,0:18:25.07:179,25,0	0/1:24,0:20:1.36:78,0,1	0/1:16,0:13:0.91:1,0,36
chr10	6791445	.	AGAGAGAGCGAGAG	A	411.58	PASS	AB=0.936;AC=16;AF=0.296;AN=54;BaseQRankSum=3.441;DP=566;FS=0.000;HRun=0;HaplotypeScore=241.3382;InbreedingCoeff=0.2814;MQ=48.03;MQ0=24;MQRankSum=0.459;QD=2.30;ReadPosRankSum=-1.753;VQSLOD=2.1227;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:0.47:0,0,1	0/1:10,0:10:38.31:38,0,80	0/0:34,0:17:47.33:0,47,747	0/0:44,0:15:37.03:0,37,602	0/1:16,0:15:26.40:26,0,75	0/0:17,0:16:8.35:0,8,76	1/1:22,0:20:1.81:5,2,0	0/0:23,0:21:24.09:0,24,355	0/0:24,0:24:11.16:0,11,211	0/0:32,0:28:4.73:0,5,453	0/0:19,0:17:12.32:0,12,110	0/1:7,5:12:15.28:92,0,15	1/1:9,2:8:10.02:254,10,0	0/1:9,1:9:6.29:10,0,6	0/1:33,0:31:35.36:35,0,310	0/0:34,0:33:19.66:0,20,463	0/0:15,0:15:24.43:0,24,431	0/1:15,0:10:10.40:10,0,157	0/0:17,0:17:43.67:0,44,891	0/0:23,0:23:9.92:0,10,42	1/1:25,0:16:2.97:20,3,0	1/1:9,4:13:9.69:58,10,0	./.	1/1:10,2:10:0.41:16,0,0	0/0:12,0:11:6.02:0,6,171	0/0:26,0:25:62.19:0,62,1939	0/0:27,0:23:36.75:0,37,741	0/0:11,0:8:17.23:0,17,328
chr10	6791449	.	AGAGC	A	2169.17	PASS	AB=0.986;AC=42;AF=0.840;AN=50;BaseQRankSum=5.051;DP=538;FS=1.490;HRun=0;HaplotypeScore=190.4472;InbreedingCoeff=0.3594;MQ=53.65;MQ0=20;MQRankSum=-3.003;QD=4.83;ReadPosRankSum=3.194;VQSLOD=2.7130;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:17,0:17:0:0,0,0	1/1:7,0:9:0.49:36,0,0	0/0:37,0:20:17.58:0,18,278	0/1:49,0:20:2.63:3,0,235	1/1:13,0:13:3.72:62,4,0	1/1:17,0:16:5.16:21,5,0	1/1:22,0:20:5.50:36,6,0	1/1:18,0:16:29.09:197,29,0	1/1:25,0:25:13.69:74,14,0	1/1:24,0:22:11.53:423,12,0	0/0:8,5:13:5.27:0,5,21	1/1:12,0:12:20.74:154,21,0	1/1:12,0:10:14.85:130,15,0	1/1:8,0:7:17.83:131,18,0	1/1:30,2:30:23.56:247,24,0	1/1:33,0:32:28.05:160,28,0	1/1:16,0:16:14.66:88,15,0	1/1:12,0:7:5.95:44,6,0	0/1:16,1:17:7.52:75,0,8	1/1:23,0:23:13.82:83,14,0	./.	1/1:15,0:15:11.84:97,12,0	./.	./.	1/1:12,1:12:2:6,2,0	0/1:24,0:23:72.18:107,0,72	1/1:25,0:22:15.52:84,16,0	1/1:10,0:8:8.05:45,8,0
chr10	6791451	.	AGC	A	2337.83	PASS	AB=0.938;AC=44;AF=0.846;AN=52;BaseQRankSum=4.587;DP=522;FS=10.561;HRun=0;HaplotypeScore=179.8038;InbreedingCoeff=0.4807;MQ=54.12;MQ0=17;MQRankSum=-5.096;QD=5.25;ReadPosRankSum=2.939;VQSLOD=2.3863;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:17,0:17:0:0,0,0	0/1:4,0:6:7.01:34,0,7	0/0:37,0:20:16.83:0,17,277	0/1:49,0:20:2.82:3,0,241	1/1:10,0:13:4.47:63,4,0	1/1:16,0:15:4.78:23,5,0	1/1:22,0:20:5.72:37,6,0	1/1:16,0:14:30.60:201,31,0	1/1:25,0:25:13.83:81,14,0	1/1:17,0:20:22.76:342,23,0	0/0:9,0:11:4.87:0,5,17	1/1:12,0:12:20.71:139,21,0	1/1:11,0:10:14.73:101,15,0	1/1:8,0:7:17.83:131,18,0	1/1:26,7:31:24.44:256,24,0	1/1:32,1:32:30.21:193,30,0	1/1:13,3:16:18.35:96,18,0	1/1:10,0:5:5.92:44,6,0	1/1:17,0:17:7.91:102,8,0	1/1:21,1:22:14.05:84,14,0	./.	1/1:15,0:15:11.97:97,12,0	./.	0/1:12,0:10:0:0,0,0	1/1:10,1:10:2.45:9,2,0	1/1:23,1:23:23.34:224,23,0	1/1:24,0:21:23.13:136,23,0	1/1:10,0:8:12.96:67,13,0
chr10	6791455	.	AGAG	A	239.90	PASS	AB=0.944;AC=13;AF=0.241;AN=54;BaseQRankSum=0.927;DP=470;FS=0.000;HRun=0;HaplotypeScore=185.6047;InbreedingCoeff=0.0611;MQ=58.98;MQ0=10;MQRankSum=-0.766;QD=1.58;ReadPosRankSum=-0.749;VQSLOD=2.5207;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:14,0:14:0.01:0,0,0	0/1:4,1:5:7.92:8,0,45	0/0:38,0:21:55.07:0,55,964	0/0:50,0:22:55.08:0,55,924	0/1:9,3:11:6.15:13,0,6	0/0:13,0:12:5.80:0,6,44	0/0:19,0:17:3.37:0,3,12	0/0:15,0:15:29.60:0,30,152	0/0:19,0:19:11.02:0,11,67	0/1:16,3:18:54.68:122,0,55	0/0:7,2:8:3.38:0,3,8	0/1:13,0:13:9.36:9,0,64	0/1:13,0:12:36.21:79,0,36	0/0:7,0:7:10.21:0,10,42	0/1:22,0:21:43.76:54,0,44	0/0:31,0:30:22.92:0,23,120	0/0:15,0:15:23.29:0,23,174	0/1:10,0:5:6.51:13,0,7	0/0:15,0:15:25.12:0,25,246	0/0:19,0:19:8.25:0,8,37	1/1:17,0:11:2.97:20,3,0	0/1:14,0:14:7.64:41,0,8	./.	1/1:13,0:11:0.48:16,0,0	0/0:9,0:8:2.92:0,3,17	0/0:23,0:23:58.62:0,59,613	0/0:21,0:18:20.30:0,20,183	0/0:6,0:5:11.45:0,11,69
chr10	6791460	.	GAGCACGAACT	G	3903.36	PASS	AB=1.000;AC=20;AF=0.400;AN=50;BaseQRankSum=-1.375;DP=398;FS=21.359;HRun=0;HaplotypeScore=186.9322;InbreedingCoeff=0.7555;MQ=64.95;MQ0=7;MQRankSum=-3.358;QD=32.26;ReadPosRankSum=6.292;VQSLOD=1.6838;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/0:5,0:5:11.25:0,11,163	0/0:39,0:22:40.96:0,41,1668	0/0:53,0:24:58.67:0,59,1981	0/0:11,0:11:18.91:0,19,318	1/1:2,5:7:6.01:189,6,0	1/1:3,11:13:8.57:263,9,0	0/0:17,0:17:42.14:0,42,825	1/1:4,10:14:12.04:384,12,0	0/0:19,0:18:48.58:0,49,678	0/0:9,0:9:12.04:0,12,221	0/0:14,0:14:14.54:0,15,577	0/1:14,0:14:5.69:6,0,453	0/0:8,0:8:24.08:0,24,456	0/0:22,0:21:34.61:0,35,920	1/1:4,14:18:27.06:863,27,0	1/1:4,7:12:18.04:594,18,0	0/0:9,0:5:9.02:0,9,150	1/1:1,3:4:12.04:394,12,0	1/1:1,11:12:14.99:489,15,0	0/0:18,0:12:18.02:0,18,303	0/0:14,0:14:33.11:0,33,684	./.	0/0:13,0:11:12.03:0,12,192	./.	0/1:13,0:13:99:256,0,195	1/1:9,0:9:12.04:319,12,0	1/1:4,0:4:5.97:147,6,0
chr10	6791462	.	GCACGAACTCGAA	G	4347.43	PASS	AB=0.753;AC=21;AF=0.404;AN=52;BaseQRankSum=-2.357;DP=394;FS=15.884;HRun=0;HaplotypeScore=190.8312;InbreedingCoeff=0.6895;MQ=68.14;MQ0=6;MQRankSum=-6.324;QD=35.34;ReadPosRankSum=6.051;VQSLOD=2.6644;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:3,8:13:0:0,0,0	0/0:5,0:5:8.96:0,9,138	0/0:44,0:27:58.32:0,58,2550	0/0:55,0:26:64.38:0,64,2581	0/0:11,0:11:18.05:0,18,325	1/1:7,0:7:6.01:198,6,0	1/1:14,0:13:8.90:266,9,0	0/0:17,0:17:42.14:0,42,817	1/1:12,0:13:12.04:361,12,0	0/0:18,0:18:34:0,34,730	0/0:9,0:9:12.04:0,12,230	0/0:14,0:14:1.18:0,1,629	0/1:14,0:14:27.24:27,0,444	0/0:8,0:8:24.08:0,24,462	0/0:22,0:21:48.19:0,48,1020	1/1:14,1:16:27.09:873,27,0	1/1:10,0:11:18.06:595,18,0	0/0:9,0:5:9.03:0,9,154	1/1:3,0:4:12.04:400,12,0	1/1:11,1:12:14.98:510,15,0	0/0:18,0:12:15.52:0,16,278	0/0:14,0:14:33.58:0,34,700	./.	0/0:14,0:12:12.03:0,12,207	./.	0/1:5,4:9:38.68:440,0,39	1/1:1,7:8:12.04:449,12,0	1/1:0,2:2:6.02:228,6,0
chr10	6791466	.	GAACT	G	1364.47	PASS	AB=1.000;AC=20;AF=0.370;AN=54;BaseQRankSum=5.102;DP=401;FS=20.389;HRun=0;HaplotypeScore=173.7268;InbreedingCoeff=0.8064;MQ=71.71;MQ0=3;MQRankSum=-5.368;QD=13.38;ReadPosRankSum=4.691;VQSLOD=1.8701;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:13,0:13:0:0,0,0	0/0:5,0:5:8.96:0,9,153	0/0:44,0:30:30.51:0,31,1595	0/0:47,0:27:71.01:0,71,1607	0/0:11,0:11:18.51:0,19,353	1/1:7,0:7:7.83:90,8,0	1/1:12,1:13:10.60:127,11,0	0/0:18,0:18:45.15:0,45,985	1/1:10,1:11:12.04:154,12,0	0/0:24,0:24:69.15:0,69,1248	0/0:10,0:10:15.05:0,15,319	0/0:15,0:15:42.06:0,42,815	0/0:15,0:15:36.04:0,36,625	0/0:12,0:12:35.99:0,36,641	0/0:24,0:23:54.43:0,54,1083	1/1:16,1:17:28.89:338,29,0	1/1:9,2:11:18.05:218,18,0	0/0:9,0:5:9.03:0,9,168	1/1:3,1:4:12.03:144,12,0	1/1:12,0:12:14.58:214,15,0	0/0:20,0:14:23.97:0,24,399	0/0:14,0:14:33.11:0,33,782	0/0:11,0:11:9.02:0,9,146	0/0:14,0:12:12.03:0,12,210	./.	0/1:5,0:5:45.92:103,0,46	1/1:7,0:7:12.02:116,12,0	1/1:2,0:2:6.01:57,6,0
chr10	6791531	.	AC	A	7862.41	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=6.481;DP=593;FS=17.774;HRun=3;HaplotypeScore=94.3808;InbreedingCoeff=0.9841;MQ=84.83;MQ0=0;MQRankSum=-3.332;QD=33.17;ReadPosRankSum=4.573;VQSLOD=3.1655;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,36:36:99:1226,99,0	0/0:9,0:9:27.09:0,27,389	0/0:29,0:29:79.81:0,80,1102	0/0:26,0:26:69.23:0,69,993	0/0:18,0:18:48.13:0,48,650	1/1:1,27:28:75.24:930,75,0	1/1:1,24:25:66.21:818,66,0	0/0:45,0:45:99:0,132,1879	1/1:0,25:25:66.21:818,66,0	0/0:23,0:23:69.23:0,69,993	0/0:9,0:9:24.08:0,24,345	0/0:18,0:18:54.14:0,54,754	0/0:32,0:32:90.19:0,90,1227	0/0:22,0:22:66.14:0,66,904	0/0:28,0:27:75.25:0,75,1078	1/1:0,27:27:81.25:1004,81,0	1/1:0,19:19:54.17:669,54,0	0/0:11,0:11:27.05:0,27,365	1/1:1,8:9:24.07:297,24,0	1/1:3,17:20:39.12:483,39,0	0/0:39,0:38:90.67:0,91,1231	0/0:13,0:13:36.11:0,36,497	0/0:10,0:10:27.09:0,27,389	0/0:24,0:24:57.18:0,57,803	1/1:1,8:9:24.08:297,24,0	1/1:0,21:21:63.20:781,63,0	1/1:1,14:15:39.08:466,39,0	1/1:1,2:3:6.02:74,6,0
chr10	6791695	.	C	CA	3728.93	PASS	AB=0.936;AC=23;AF=0.411;AN=56;BaseQRankSum=-10.851;DP=607;FS=9.446;HRun=12;HaplotypeScore=97.9547;InbreedingCoeff=0.4322;MQ=68.18;MQ0=0;MQRankSum=2.149;QD=10.68;ReadPosRankSum=-0.700;VQSLOD=2.2350;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,18:28:25.02:376,25,0	0/1:13,0:13:8.72:9,0,11	0/0:19,0:15:6.67:0,7,98	0/1:21,0:20:52.12:52,0,61	0/1:27,0:26:19.60:33,0,20	1/1:4,23:28:54.64:497,55,0	1/1:8,11:20:31.97:393,32,0	0/0:34,0:34:11.16:0,11,35	0/1:5,23:28:6.27:304,0,6	0/1:20,0:20:9.27:9,0,15	0/0:20,0:19:6.38:0,6,19	0/1:17,0:17:7.32:7,0,14	0/0:18,0:18:15.51:0,16,48	0/0:16,0:16:10.27:0,10,26	0/0:26,0:26:13.84:0,14,37	1/1:5,25:31:35.14:373,35,0	1/1:2,15:17:33.05:321,33,0	0/0:15,0:15:9.83:0,10,25	1/1:6,10:17:13.92:268,14,0	1/1:8,25:34:54.86:629,55,0	0/0:15,0:15:6.07:0,6,18	0/0:20,0:19:10.74:0,11,29	0/1:18,0:18:12.69:13,0,18	0/0:13,0:13:9.03:0,9,24	1/1:7,22:29:29.17:445,29,0	0/0:28,1:29:31.61:0,32,388	0/0:27,0:27:55.74:0,56,402	0/0:5,0:6:0.54:0,1,73
chr10	6791705	.	AAAG	A	3952.70	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=5.608;DP=631;FS=38.006;HRun=0;HaplotypeScore=117.7371;InbreedingCoeff=0.9965;MQ=70.84;MQ0=0;MQRankSum=-0.304;QD=13.31;ReadPosRankSum=-3.445;VQSLOD=1.0788;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:60.14:0,60,788	1/1:12,1:13:27.32:169,27,0	0/0:24,0:19:42.98:0,43,585	0/0:19,0:18:37.08:0,37,447	1/1:22,5:26:57.73:458,58,0	0/0:30,0:29:67.44:0,67,882	0/0:19,0:19:57.18:0,57,815	1/1:36,3:39:84.57:648,85,0	0/0:32,0:32:60.17:0,60,848	1/1:18,2:20:52.74:404,53,0	1/1:20,2:21:28.64:179,29,0	1/1:12,4:16:37.36:331,37,0	1/1:25,1:26:49.73:432,50,0	1/1:13,0:13:18.42:94,18,0	1/1:24,1:25:32.06:214,32,0	0/0:28,0:28:46.62:0,47,558	0/0:18,0:18:42.14:0,42,588	1/1:17,0:17:25.69:131,26,0	0/0:19,0:19:32.35:0,32,599	0/0:34,0:34:83.51:0,84,1144	1/1:18,0:18:42.32:258,42,0	1/1:21,1:21:39.43:238,39,0	1/1:24,0:24:27.48:270,27,0	1/1:14,1:15:20.05:128,20,0	0/0:26,0:26:60.06:0,60,800	0/0:29,0:29:66.49:0,66,1292	0/0:25,0:25:65.28:0,65,1237	0/0:6,0:6:18.06:0,18,328
chr10	6791706	.	AAG	A	7064.38	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-0.462;DP=637;FS=21.540;HRun=0;HaplotypeScore=97.3487;InbreedingCoeff=0.9901;MQ=70.49;MQ0=0;MQRankSum=0.074;QD=23.47;ReadPosRankSum=-4.391;VQSLOD=2.8153;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:59.97:0,60,576	1/1:3,10:13:32.75:336,33,0	0/0:23,0:18:9.29:0,9,440	0/0:19,0:18:34.40:0,34,343	1/1:7,20:26:64.31:613,64,0	0/0:30,0:29:64.92:0,65,610	0/0:19,0:19:57.09:0,57,588	1/1:29,11:40:99:993,107,0	0/0:32,0:32:60.09:0,60,626	1/1:4,16:20:56.91:551,57,0	1/1:6,16:21:35.83:371,36,0	1/1:11,4:15:41.65:390,42,0	1/1:20,8:28:83.21:805,83,0	1/1:3,10:13:23.99:297,24,0	1/1:8,17:25:35.92:428,36,0	0/0:28,0:28:27.96:0,28,368	0/0:18,0:18:42.06:0,42,411	1/1:1,16:17:27.05:342,27,0	0/0:20,0:20:31.38:0,31,476	0/0:34,0:34:66.98:0,67,778	1/1:14,6:20:54.06:537,54,0	1/1:3,19:21:47.78:482,48,0	1/1:15,9:24:65.62:653,66,0	1/1:2,13:15:21.06:267,21,0	0/0:27,0:27:62.98:0,63,600	0/0:27,2:29:39.81:0,40,973	0/0:25,0:25:64.69:0,65,949	0/0:6,0:6:18.05:0,18,250
chr10	6791707	.	AG	A	5699.58	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=2.071;DP=628;FS=30.574;HRun=1;HaplotypeScore=91.2943;InbreedingCoeff=0.9833;MQ=71.09;MQ0=0;MQRankSum=0.092;QD=19.06;ReadPosRankSum=-4.651;VQSLOD=2.4914;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:25:57.42:0,57,371	1/1:11,2:13:32.79:273,33,0	0/0:23,0:18:6.18:0,6,347	0/0:19,1:19:22.41:0,22,297	1/1:25,2:26:65.44:489,65,0	0/0:30,0:29:43.90:0,44,348	0/0:19,0:19:55.53:0,56,377	1/1:33,7:40:99:962,110,0	0/0:31,0:31:58.80:0,59,420	1/1:18,1:19:56.65:429,57,0	1/1:18,4:21:35.86:311,36,0	1/1:14,2:16:47.66:360,48,0	1/1:26,2:28:83.10:677,83,0	1/1:11,1:12:23.82:175,24,0	1/1:19,5:24:35.75:284,36,0	0/0:27,0:27:39.85:0,40,223	0/0:18,0:18:40.78:0,41,255	1/1:16,1:17:26.83:198,27,0	0/0:19,0:19:27.36:0,27,341	0/0:31,0:31:42.22:0,42,444	1/1:17,3:20:56.87:482,57,0	1/1:20,2:21:47.63:358,48,0	1/1:23,1:24:67.35:550,67,0	1/1:14,1:15:20.85:153,21,0	0/0:27,0:27:61.37:0,61,381	0/0:28,0:28:57.47:0,57,754	0/0:24,1:25:63.94:0,64,717	0/0:6,0:6:17.92:0,18,187
chr10	6792452	.	AG	A	2910.88	PASS	AC=54;AF=1.000;AN=54;BaseQRankSum=-1.307;DP=453;FS=5.121;HRun=2;HaplotypeScore=91.8856;InbreedingCoeff=-0.0525;MQ=45.49;MQ0=12;MQRankSum=-2.411;QD=6.63;ReadPosRankSum=-2.549;VQSLOD=-0.0983;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:16:32.58:145,33,0	1/1:7,0:6:11.45:87,11,0	1/1:17,0:3:2.88:15,3,0	./.	1/1:22,0:23:2.99:129,3,0	1/1:7,0:7:11.02:45,11,0	1/1:14,0:13:10.38:56,10,0	1/1:13,17:28:33.94:221,34,0	1/1:4,0:4:6.59:30,7,0	1/1:12,11:22:31.23:169,31,0	1/1:21,0:20:16.19:118,16,0	1/1:9,0:9:4.98:79,5,0	1/1:16,1:17:0.11:41,0,0	1/1:15,0:16:7.34:65,7,0	1/1:14,0:12:7.36:98,7,0	1/1:19,0:19:23.40:106,23,0	1/1:16,0:16:22.88:124,23,0	1/1:18,1:18:17.69:179,18,0	1/1:23,0:24:56.04:326,56,0	1/1:21,0:18:26.37:142,26,0	1/1:7,0:7:5.05:47,5,0	1/1:12,1:13:2.17:99,2,0	1/1:14,0:14:21.32:134,21,0	1/1:7,0:7:0.84:49,1,0	1/1:16,0:16:21.04:99,21,0	1/1:17,0:20:28.37:167,28,0	1/1:20,1:25:19.71:110,20,0	1/1:14,0:12:17.28:108,17,0
chr10	6792457	.	A	AAAAAAAAG	6646.04	PASS	AB=1.000;AC=26;AF=0.464;AN=56;BaseQRankSum=-6.775;DP=488;FS=13.410;HRun=0;HaplotypeScore=128.4914;InbreedingCoeff=0.3326;MQ=49.31;MQ0=11;MQRankSum=-5.715;QD=21.93;ReadPosRankSum=0.634;VQSLOD=3.5778;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,0:15:34.64:874,35,0	0/1:7,0:6:26.88:27,0,71	0/0:25,0:6:11.45:0,11,81	0/0:16,0:2:0.47:0,0,1	0/0:20,0:20:20.16:0,20,574	1/1:1,8:10:15.05:507,15,0	1/1:1,10:16:5.68:238,6,0	0/0:31,0:29:0.66:0,1,323	1/1:0,5:6:6.02:238,6,0	0/1:25,0:24:36.21:36,0,410	0/1:23,0:22:16.27:16,0,415	0/0:11,0:11:8.76:0,9,192	0/0:17,0:17:36.80:0,37,609	0/0:16,0:16:12.07:0,12,339	0/0:12,0:10:21.05:0,21,410	1/1:1,17:21:24.08:917,24,0	1/1:2,15:19:23.95:710,24,0	0/0:17,0:16:20.34:0,20,781	1/1:26,0:25:62.64:944,63,0	1/1:5,18:24:27.95:902,28,0	0/1:7,0:7:27.94:28,0,132	0/0:14,0:14:32.79:0,33,463	0/1:18,0:18:68.21:68,0,252	0/0:6,0:6:15:0,15,258	1/1:1,18:22:21.07:766,21,0	0/1:20,0:19:7.84:168,0,8	0/1:23,0:23:41.54:194,0,42	0/1:14,0:12:13.73:14,0,31
chr10	6792578	.	GAAA	G	5149.03	PASS	AB=0.697;AC=22;AF=0.393;AN=56;BaseQRankSum=0.899;DP=516;FS=3.044;HRun=14;HaplotypeScore=100.4128;InbreedingCoeff=0.8475;MQ=71.37;MQ0=1;MQRankSum=-3.348;QD=20.93;ReadPosRankSum=10.006;VQSLOD=3.1347;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:4,15:19:16.98:303,17,0	0/0:1,0:7:15.05:0,15,210	0/0:18,0:14:15.15:0,15,129	0/0:15,0:14:12.96:0,13,108	0/0:8,0:27:55.24:0,55,594	1/1:5,18:23:44.76:525,45,0	1/1:4,8:12:14.63:158,15,0	0/0:13,0:43:85.83:0,86,1011	1/1:4,12:16:23.68:280,24,0	0/0:5,0:17:45.01:0,45,515	0/0:14,0:20:49.65:0,50,614	0/0:1,0:13:15.05:0,15,210	0/0:6,0:20:20.55:0,21,299	0/0:5,0:12:14.87:0,15,126	0/0:4,0:16:30.09:0,30,415	1/1:5,16:21:44.70:525,45,0	1/1:5,23:28:56.82:665,57,0	0/0:4,0:17:18.06:0,18,272	1/1:11,17:27:48.22:628,48,0	1/1:2,24:26:62.63:700,63,0	0/0:3,0:5:12.04:0,12,183	0/0:1,0:11:21.03:0,21,273	0/0:5,0:17:20.25:0,20,215	0/0:6,0:10:21.04:0,21,275	1/1:3,16:19:35.92:403,36,0	0/1:5,13:19:4.13:365,0,4	1/1:3,16:19:45.08:526,45,0	0/1:12,3:16:23.13:71,0,23
chr10	6792764	.	A	AC	10878.40	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=7.446;DP=718;FS=8.333;HRun=4;HaplotypeScore=81.7279;InbreedingCoeff=0.9994;MQ=88.21;MQ0=0;MQRankSum=-3.260;QD=34.87;ReadPosRankSum=1.778;VQSLOD=5.0881;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,25:29:60.20:819,60,0	0/0:8,0:8:21.06:0,21,238	0/0:27,0:27:64.83:0,65,724	0/0:26,0:26:57.15:0,57,640	0/0:35,0:35:90.26:0,90,1021	1/1:2,37:39:99:1395,102,0	1/1:1,22:23:63.21:862,63,0	0/0:34,0:33:93.26:0,93,1055	1/1:1,19:20:42.14:574,42,0	0/0:32,0:32:93.26:0,93,1055	0/0:17,0:17:39.11:0,39,442	0/0:22,0:22:66.19:0,66,749	0/0:43,0:43:99:0,120,1361	0/0:24,0:24:69.20:0,69,783	0/0:36,0:36:99:0,108,1225	1/1:1,16:17:48.16:657,48,0	1/1:2,24:26:63.21:862,63,0	0/0:13,0:13:33.09:0,33,374	1/1:0,17:17:51.17:697,51,0	1/1:2,24:26:63.08:797,63,0	0/0:23,0:23:66.19:0,66,748	0/0:24,0:24:72.19:0,72,805	0/0:18,0:18:54.15:0,54,613	0/0:24,0:24:57.16:0,57,646	1/1:2,30:31:87.29:1188,87,0	1/1:2,34:36:65.21:1224,65,0	1/1:2,31:32:93.31:1271,93,0	1/1:1,13:14:39.13:533,39,0
chr10	6793360	.	TAATA	T	1387.18	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=2.158;DP=378;FS=4.878;HRun=0;HaplotypeScore=120.1664;InbreedingCoeff=0.7620;MQ=49.38;MQ0=10;MQRankSum=-5.520;QD=39.63;ReadPosRankSum=1.922;VQSLOD=4.0971;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:57.12:0,57,1336	0/0:4,0:4:3.01:0,3,80	0/0:9,0:3:6.02:0,6,110	0/0:15,0:6:12.04:0,12,193	0/0:13,0:13:30.06:0,30,565	0/0:15,0:15:36.12:0,36,793	0/0:7,0:7:15.05:0,15,348	0/0:31,0:30:60.17:0,60,1388	0/0:9,0:9:27.08:0,27,629	0/0:21,0:20:19.90:0,20,976	0/0:15,0:15:27.05:0,27,544	0/0:11,0:11:18.06:0,18,440	0/0:8,0:8:9.03:0,9,213	0/0:10,0:10:12.04:0,12,251	0/0:19,0:19:33.11:0,33,734	0/0:17,0:17:39.13:0,39,920	0/0:25,0:24:62.37:0,62,1459	0/0:9,0:9:9.03:0,9,240	0/0:14,0:11:24.08:0,24,581	0/0:13,0:13:39.13:0,39,895	0/0:14,0:14:27.06:0,27,482	0/0:3,0:3:9.03:0,9,213	0/0:8,0:8:21.03:0,21,411	0/0:9,0:9:18.04:0,18,368	0/0:19,0:19:51.17:0,51,1178	1/1:3,9:11:27.09:501,27,0	1/1:5,17:22:54.19:992,54,0	1/1:1,0:1:3:25,3,0
chr10	6793371	.	T	TAAA	6382.77	PASS	AB=1.000;AC=49;AF=0.907;AN=54;BaseQRankSum=-0.671;DP=394;FS=2.328;HRun=10;HaplotypeScore=122.7321;InbreedingCoeff=0.5950;MQ=54.14;MQ0=7;MQRankSum=-4.704;QD=17.73;ReadPosRankSum=0.450;VQSLOD=2.8299;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:24,1:26:28.49:351,28,0	1/1:7,0:7:8.99:89,9,0	0/0:16,0:7:15.08:0,15,156	0/0:18,0:7:6.69:0,7,71	1/1:16,0:16:39.03:515,39,0	1/1:15,0:15:39.13:322,39,0	1/1:9,0:9:25.03:205,25,0	1/1:30,0:31:39.48:315,39,0	1/1:8,0:8:17.89:204,18,0	1/1:19,0:18:37.32:427,37,0	1/1:15,0:15:29.11:379,29,0	1/1:11,0:11:11.40:137,11,0	1/1:6,0:6:6.02:84,6,0	1/1:11,0:11:9.03:116,9,0	1/1:20,0:19:18.03:232,18,0	1/1:18,1:19:44.19:417,44,0	1/1:24,1:25:40.88:323,41,0	1/1:9,0:10:6.02:83,6,0	1/1:11,0:10:23.77:223,24,0	1/1:19,0:19:40.90:368,41,0	1/1:6,0:7:4.25:37,4,0	0/1:3,0:3:2.38:36,0,2	1/1:5,0:6:12.04:168,12,0	1/1:8,0:8:7.97:61,8,0	1/1:17,2:19:50.28:523,50,0	1/1:15,0:15:35.54:332,36,0	1/1:22,0:21:52.11:434,52,0	./.
chr10	6793378	.	A	AAAAAAAAG	9770.27	PASS	AB=1.000;AC=39;AF=0.722;AN=54;BaseQRankSum=-11.361;DP=458;FS=4.720;HRun=0;HaplotypeScore=151.4529;InbreedingCoeff=-0.1117;MQ=54.98;MQ0=5;MQRankSum=2.173;QD=23.26;ReadPosRankSum=-2.191;VQSLOD=4.1774;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:24:99:118,0,163	1/1:1,7:10:12.04:400,12,0	0/0:21,0:9:7.51:0,8,222	0/0:17,0:7:0.03:0,0,87	1/1:2,14:27:56.99:1559,57,0	0/1:17,0:17:16.73:17,0,294	0/1:11,0:11:8.78:9,0,141	1/1:8,20:38:86.98:1816,87,0	0/1:6,0:6:20.69:21,0,57	1/1:3,15:24:57.03:1403,57,0	1/1:2,11:17:33.03:1100,33,0	1/1:2,5:13:11.71:354,12,0	1/1:0,5:12:6.02:253,6,0	1/1:0,8:12:9.03:366,9,0	1/1:3,11:23:18.06:727,18,0	0/1:18,0:18:60.76:61,0,261	0/1:23,0:22:17.42:17,0,333	1/1:2,6:10:4.87:250,5,0	0/1:14,0:11:53.65:54,0,138	0/1:21,0:21:5.19:5,0,321	1/1:2,3:9:5.98:137,6,0	1/1:4,0:4:8.97:139,9,0	1/1:2,5:11:11.54:502,12,0	1/1:2,7:12:6.02:216,6,0	0/1:21,0:21:37.68:38,0,284	0/1:17,0:17:99:146,0,225	0/1:23,0:22:64.95:65,0,386	./.
chr10	6793381	.	AG	A	5252.15	PASS	AB=0.916;AC=27;AF=0.500;AN=54;BaseQRankSum=-2.509;DP=434;FS=11.820;HRun=1;HaplotypeScore=115.5975;InbreedingCoeff=0.4310;MQ=54.83;MQ0=5;MQRankSum=-3.807;QD=17.74;ReadPosRankSum=-1.589;VQSLOD=3.6677;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,13:23:6.51:372,7,0	0/0:9,0:9:11.52:0,12,72	0/1:21,3:9:2.40:2,0,122	0/1:18,0:8:18.11:18,0,69	0/1:24,2:26:54.12:54,0,252	1/1:5,12:17:42.09:530,42,0	1/1:6,5:11:32.03:330,32,0	0/0:30,1:30:4.09:0,4,209	1/1:2,5:7:20.57:218,21,0	0/0:21,0:20:36.86:0,37,256	0/1:14,1:15:9.98:10,0,81	0/1:11,1:12:10.23:10,0,73	0/0:11,0:11:4.86:0,5,18	0/0:11,0:11:7.34:0,7,26	0/0:23,0:22:16.29:0,16,64	1/1:4,14:18:51.12:616,51,0	1/1:11,11:21:18.39:517,18,0	0/1:8,0:8:4.30:4,0,12	0/1:9,5:11:39.95:233,0,40	1/1:11,10:21:55.70:571,56,0	0/0:8,0:8:3.10:0,3,22	0/0:4,0:4:11.39:0,11,100	0/0:10,0:10:10.26:0,10,39	0/0:10,0:10:10.12:0,10,47	1/1:6,13:19:51.34:570,51,0	1/1:5,12:17:31.79:454,32,0	1/1:5,19:23:62.93:741,63,0	./.
chr10	6793390	.	GAA	G	5627.84	PASS	AB=1.000;AC=26;AF=0.481;AN=54;BaseQRankSum=1.326;DP=448;FS=4.638;HRun=5;HaplotypeScore=117.3349;InbreedingCoeff=0.5822;MQ=55.78;MQ0=4;MQRankSum=-6.028;QD=19.54;ReadPosRankSum=0.927;VQSLOD=2.0867;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,17:25:23.39:460,23,0	0/0:8,0:8:12.04:0,12,186	0/0:21,0:9:23.13:0,23,252	0/0:18,0:9:10.06:0,10,129	0/1:29,0:29:11.91:12,0,891	1/1:0,19:19:45.06:602,45,0	1/1:2,9:11:10.97:347,11,0	0/1:29,0:27:84.31:84,0,760	1/1:1,7:8:9.93:175,10,0	0/0:20,0:20:8.66:0,9,667	0/1:17,0:17:11.47:11,0,491	0/1:11,0:11:6.55:7,0,218	0/0:14,0:14:12.04:0,12,177	0/0:8,0:8:2.54:0,3,84	0/0:22,0:21:27.56:0,28,411	1/1:3,15:18:39.04:512,39,0	1/1:3,17:20:38.66:538,39,0	0/0:9,0:9:12.92:0,13,166	1/1:6,9:12:4.77:305,5,0	1/1:1,22:23:62.99:782,63,0	0/0:8,0:8:1.66:0,2,68	0/0:5,0:5:12.04:0,12,203	0/0:12,0:12:18.53:0,19,264	0/0:14,0:14:22.95:0,23,333	1/1:4,16:20:47.75:559,48,0	1/1:2,17:19:3.71:571,4,0	1/1:5,19:23:51.08:663,51,0	./.
chr10	6793392	.	A	AAG	2942.91	PASS	AB=0.977;AC=33;AF=0.611;AN=54;BaseQRankSum=8.818;DP=458;FS=16.651;HRun=0;HaplotypeScore=129.1923;InbreedingCoeff=-0.1533;MQ=57.31;MQ0=4;MQRankSum=-8.948;QD=7.09;ReadPosRankSum=6.779;VQSLOD=1.9747;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:24:3.09:217,0,3	0/1:8,0:8:0.12:2,0,0	0/0:23,0:9:23.86:0,24,260	0/0:20,0:11:17.47:0,17,140	0/1:28,2:30:99:147,0,360	1/1:19,0:19:42.39:262,42,0	1/1:11,0:11:7.84:127,8,0	0/1:29,1:28:99:294,0,429	0/1:9,0:9:6.03:62,0,6	0/1:20,0:20:99:129,0,239	0/1:16,1:17:99:107,0,140	0/1:11,0:11:39.94:40,0,120	0/1:13,0:13:2.40:2,0,80	1/1:7,0:7:6.60:66,7,0	0/1:24,0:23:5.37:5,0,182	1/1:18,0:18:31.30:153,31,0	1/1:20,0:19:5.67:154,6,0	0/1:11,0:11:4.47:4,0,103	0/1:15,0:13:47.76:178,0,48	1/1:23,0:23:42.40:330,42,0	0/1:7,1:8:37.45:54,0,37	0/1:6,0:6:1.94:2,0,136	0/1:12,0:12:9.61:10,0,75	0/1:14,1:15:44.10:44,0,244	0/1:20,0:20:24.49:115,0,24	1/1:20,0:20:36.87:353,37,0	1/1:23,0:22:34.04:243,34,0	./.
chr10	6794504	.	AAAAC	A	701.83	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-0.019;DP=423;FS=0.000;HRun=0;HaplotypeScore=88.6532;InbreedingCoeff=0.9259;MQ=74.17;MQ0=2;MQRankSum=-2.340;QD=46.79;ReadPosRankSum=1.366;VQSLOD=4.2409;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,15:15:42.14:797,42,0	0/0:7,0:7:11.52:0,12,165	0/0:18,0:14:36.01:0,36,665	0/0:14,0:13:32.29:0,32,755	0/0:22,0:22:60.17:0,60,1014	0/0:15,0:15:42.10:0,42,970	0/0:10,0:10:30.10:0,30,741	0/0:33,0:33:84.48:0,84,1335	0/0:10,0:10:30.10:0,30,704	0/0:10,0:10:27.08:0,27,426	0/0:16,0:16:48.15:0,48,838	0/0:25,0:25:71.02:0,71,1197	0/0:13,0:13:36.10:0,36,604	0/0:9,0:9:18.06:0,18,351	0/0:24,0:24:71.02:0,71,1154	0/0:9,0:9:27.08:0,27,641	0/0:12,0:12:33.09:0,33,691	0/0:6,0:6:12.04:0,12,232	0/0:17,0:17:51.17:0,51,1199	0/0:16,0:16:45.07:0,45,987	0/0:13,0:13:30.10:0,30,526	0/0:17,0:17:48.16:0,48,808	0/0:12,0:12:25.63:0,26,422	0/0:11,0:11:30.10:0,30,516	0/0:25,0:25:72.20:0,72,1634	0/0:18,0:18:54.19:0,54,1323	0/0:16,0:16:48.13:0,48,1123	0/0:10,0:10:30.10:0,30,769
chr10	6794508	.	C	CA	6345.15	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-9.425;DP=430;FS=10.647;HRun=7;HaplotypeScore=45.9933;InbreedingCoeff=0.9836;MQ=73.33;MQ0=2;MQRankSum=0.906;QD=28.20;ReadPosRankSum=-0.608;VQSLOD=4.5530;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:25:0,25,75	1/1:0,5:5:15.04:172,15,0	0/0:18,0:14:30.39:0,30,276	0/0:13,0:12:27.01:0,27,251	1/1:4,18:22:54.12:632,54,0	0/0:12,0:12:36.05:0,36,342	0/0:10,0:10:30.05:0,30,290	1/1:7,28:35:84.62:960,85,0	0/0:10,0:10:21.03:0,21,202	1/1:1,10:11:27.06:313,27,0	1/1:5,13:18:45.05:509,45,0	1/1:6,20:26:54.17:652,54,0	1/1:0,14:14:36.11:434,36,0	1/1:3,5:8:12.04:141,12,0	1/1:2,22:24:66.20:797,66,0	0/0:8,0:8:24.04:0,24,232	0/0:12,0:12:29.98:0,30,273	1/1:0,6:6:9.03:109,9,0	0/0:19,0:19:48.07:0,48,463	0/0:17,0:17:33.02:0,33,311	1/1:0,15:15:30.09:362,30,0	1/1:0,17:17:51.15:611,51,0	1/1:0,11:11:27.08:326,27,0	1/1:1,12:13:27.08:326,27,0	0/0:27,0:27:64.88:0,65,608	0/0:19,0:19:51.06:0,51,485	0/0:15,0:15:39.06:0,39,376	0/0:10,0:10:30.05:0,30,290
chr10	6794630	.	CCA	C	8462.12	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=7.333;DP=472;FS=10.148;HRun=0;HaplotypeScore=67.9609;InbreedingCoeff=0.9884;MQ=81.96;MQ0=5;MQRankSum=-1.219;QD=33.18;ReadPosRankSum=3.140;VQSLOD=6.8964;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:51.14:0,51,809	1/1:0,8:8:18.06:275,18,0	0/0:28,0:20:20.10:0,20,466	0/0:20,0:18:50.22:0,50,501	1/1:2,28:30:75.07:1025,75,0	0/0:13,0:13:39.10:0,39,629	0/0:22,0:22:66.20:0,66,1086	1/1:5,14:19:42.05:555,42,0	0/0:7,0:7:21.07:0,21,367	1/1:1,10:11:30.09:438,30,0	1/1:4,20:24:63.17:932,63,0	1/1:2,20:21:45.15:688,45,0	1/1:2,13:14:39.12:573,39,0	1/1:4,12:16:18.66:209,19,0	1/1:1,25:26:60.20:911,60,0	0/0:18,0:18:53.96:0,54,871	0/0:7,0:7:18.03:0,18,284	1/1:0,7:7:12.04:184,12,0	0/0:8,0:8:24.06:0,24,328	0/0:24,0:24:69.18:0,69,1129	1/1:3,12:15:27.09:413,27,0	1/1:1,20:21:54.14:793,54,0	1/1:4,15:19:53.96:734,54,0	1/1:0,22:22:48.16:733,48,0	0/0:8,0:8:24.08:0,24,423	0/0:21,0:21:63.15:0,63,1000	0/0:19,0:19:57.20:0,57,998	0/0:5,0:5:15.05:0,15,264
chr10	6794631	.	CA	C	4169.73	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=12.173;DP=465;FS=11.081;HRun=1;HaplotypeScore=74.0041;InbreedingCoeff=0.9838;MQ=82.27;MQ0=5;MQRankSum=-0.503;QD=16.68;ReadPosRankSum=2.889;VQSLOD=2.8475;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:51.11:0,51,638	1/1:8,0:8:17.80:119,18,0	0/0:28,0:20:11.33:0,11,311	0/0:20,0:18:43.97:0,44,415	1/1:28,2:30:74.37:545,74,0	0/0:13,0:13:39.10:0,39,505	0/0:22,0:22:66.18:0,66,852	1/1:15,2:17:41.70:327,42,0	0/0:7,0:7:21.07:0,21,280	1/1:10,1:11:29.79:220,30,0	1/1:20,4:24:62.49:456,62,0	1/1:20,2:21:44.54:303,45,0	1/1:14,1:14:38.54:255,39,0	1/1:14,1:15:17.88:152,18,0	1/1:25,1:26:59.38:413,59,0	0/0:18,0:18:53.94:0,54,686	0/0:6,0:6:18.03:0,18,226	1/1:7,0:7:11.87:79,12,0	0/0:8,0:8:23.63:0,24,241	0/0:23,0:23:69:0,69,875	1/1:12,2:14:26.70:179,27,0	1/1:20,1:21:53.56:396,54,0	1/1:18,0:18:53.45:408,53,0	1/1:22,0:22:47.46:317,47,0	0/0:8,0:8:24.08:0,24,334	0/0:21,0:21:62.22:0,62,795	0/0:19,0:19:57.19:0,57,780	0/0:5,0:5:15.05:0,15,208
chr10	6795730	.	CAA	C	1725.78	PASS	AB=0.920;AC=30;AF=0.556;AN=54;BaseQRankSum=-5.202;DP=416;FS=7.370;HRun=16;HaplotypeScore=64.8356;InbreedingCoeff=0.4954;MQ=35.28;MQ0=51;MQRankSum=4.020;QD=6.56;ReadPosRankSum=4.540;VQSLOD=-0.3741;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,0:10:15.72:65,16,0	0/0:5,0:3:1.82:0,2,5	0/1:50,0:10:0.36:0,0,151	0/0:59,0:10:14:0,14,173	0/0:15,0:10:0.51:0,1,5	1/1:4,9:13:23.64:187,24,0	1/1:3,5:6:14.98:125,15,0	0/0:19,0:14:12.94:0,13,48	1/1:1,3:3:2.91:25,3,0	0/0:11,0:7:5.40:0,5,50	0/0:12,0:10:1.70:0,2,17	0/0:8,0:3:0.89:0,1,2	1/1:11,0:6:2.02:6,2,0	0/0:7,0:4:4.82:0,5,17	0/0:5,0:2:0:0,0,0	1/1:1,8:8:20.98:175,21,0	1/1:12,14:21:47.51:376,48,0	0/1:8,0:5:13.24:13,0,21	1/1:11,9:16:29.50:224,29,0	1/1:2,5:7:17.71:137,18,0	0/1:5,0:5:1.14:7,0,1	./.	0/0:3,0:1:0:0,0,0	1/1:7,0:5:2.89:16,3,0	1/1:6,13:19:26.74:271,27,0	1/1:6,0:11:19.58:82,20,0	1/1:5,0:14:27.42:117,27,0	0/1:12,0:14:1.54:51,0,2
chr10	6795746	.	A	ATTT	2066.46	PASS	AB=1.000;AC=21;AF=0.420;AN=50;BaseQRankSum=-4.581;DP=419;FS=26.976;HRun=4;HaplotypeScore=77.4439;InbreedingCoeff=0.8241;MQ=38.79;MQ0=36;MQRankSum=-2.315;QD=21.30;ReadPosRankSum=-1.871;VQSLOD=-0.7256;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:11:21.80:0,22,103	1/1:6,0:5:9.03:165,9,0	0/0:66,0:13:26.17:0,26,309	0/0:74,0:14:3.27:0,3,252	1/1:12,2:13:27.07:384,27,0	0/0:10,0:10:21.66:0,22,101	0/0:5,0:5:12.80:0,13,50	1/1:21,3:18:53.97:671,54,0	0/0:3,0:2:2.84:0,3,14	1/1:10,0:8:21.05:271,21,0	1/1:9,0:8:21.03:251,21,0	1/1:6,0:2:3.01:60,3,0	1/1:8,0:3:6.02:81,6,0	1/1:4,0:4:5.92:42,6,0	./.	0/0:11,0:10:22.69:0,23,113	0/0:22,0:20:40.99:0,41,162	1/1:8,1:6:12.04:207,12,0	0/0:26,0:22:18.48:0,18,163	0/0:9,0:9:24.62:0,25,119	1/1:3,0:3:9.02:120,9,0	./.	./.	0/1:4,0:3:0:0,0,0	0/0:22,0:21:48.63:0,49,224	0/0:18,0:15:36.80:0,37,198	0/0:15,0:13:31.30:0,31,150	0/0:20,0:14:16.67:0,17,64
chr10	6795906	.	GTACAAATT	G	8801.28	PASS	AC=26;AF=0.481;AN=54;BaseQRankSum=13.319;DP=321;FS=9.582;HRun=0;HaplotypeScore=85.7553;InbreedingCoeff=0.8779;MQ=61.92;MQ0=0;MQRankSum=-11.735;QD=66.68;ReadPosRankSum=0.686;VQSLOD=4.3435;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:51.18:0,51,2154	1/1:0,2:2:6.02:172,6,0	0/0:3,0:3:6.02:0,6,253	0/0:6,0:6:12.04:0,12,364	1/1:0,9:9:24.08:651,24,0	0/0:22,0:22:63.22:0,63,2738	0/0:11,0:11:33.10:0,33,1366	1/1:4,24:28:72.25:2064,72,0	0/0:4,0:4:12.04:0,12,537	1/1:1,15:13:33.11:945,33,0	1/1:0,6:5:12.04:339,12,0	1/1:0,5:5:12.04:344,12,0	1/1:0,16:16:36.12:1025,36,0	1/1:0,11:11:24.08:688,24,0	1/1:1,12:13:30.10:860,30,0	0/0:13,0:13:39.13:0,39,1738	0/0:20,0:20:60.21:0,60,2591	1/1:0,8:8:18.06:516,18,0	0/0:16,0:16:45.11:0,45,1730	0/0:14,0:14:42.14:0,42,1874	1/1:1,9:10:24.08:683,24,0	./.	1/1:0,5:5:15.05:430,15,0	1/1:0,3:3:2.57:85,3,0	0/0:15,0:15:45.15:0,45,1958	0/0:28,0:28:0.27:0,0,3237	0/0:16,0:16:48.15:0,48,1964	0/0:3,0:3:9.03:0,9,403
chr10	6796009	.	T	TA	5874.72	PASS	AB=0.538;AC=23;AF=0.411;AN=56;BaseQRankSum=-14.241;DP=477;FS=0.360;HRun=8;HaplotypeScore=44.6259;InbreedingCoeff=0.9091;MQ=70.86;MQ0=0;MQRankSum=3.581;QD=29.08;ReadPosRankSum=1.671;VQSLOD=4.8473;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,12:13:36.11:415,36,0	0/0:5,0:5:12.01:0,12,110	0/0:12,0:12:26.82:0,27,226	0/0:10,0:10:12:0,12,106	0/0:29,0:29:71.98:0,72,644	0/1:3,18:21:6.79:437,0,7	1/1:0,13:13:39.12:450,39,0	0/0:38,0:38:99:0,102,923	1/1:0,8:8:18.05:208,18,0	0/0:28,0:28:81.04:0,81,740	0/0:26,0:26:78.03:0,78,709	0/0:17,0:17:51.03:0,51,467	0/0:19,0:19:44.87:0,45,392	0/0:18,0:18:51.02:0,51,467	0/0:21,0:20:59.96:0,60,539	1/1:3,14:17:11.65:388,12,0	1/1:0,16:16:42.12:485,42,0	0/0:18,0:18:45.02:0,45,412	1/1:0,18:18:54.12:600,54,0	1/1:1,19:20:60.11:665,60,0	0/0:5,0:5:9:0,9,82	0/0:4,0:4:12.01:0,12,110	0/0:16,0:16:47.95:0,48,425	0/0:9,0:9:27.01:0,27,247	1/1:0,14:13:39.12:450,39,0	1/1:3,21:24:14.26:663,14,0	1/1:3,25:28:44.64:769,45,0	1/1:0,10:10:30.09:346,30,0
chr10	6797340	.	GA	G	6534.18	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=13.322;DP=506;FS=0.339;HRun=7;HaplotypeScore=52.7609;InbreedingCoeff=0.9958;MQ=75.23;MQ0=0;MQRankSum=-1.227;QD=26.78;ReadPosRankSum=-0.607;VQSLOD=5.0827;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:33.11:0,33,415	1/1:1,8:9:24.05:245,24,0	0/0:11,0:12:18.58:0,19,238	0/0:10,0:10:15.63:0,16,153	1/1:0,19:19:51.11:520,51,0	0/0:19,0:19:54.17:0,54,679	0/0:11,0:11:33.09:0,33,401	1/1:2,31:33:90.16:902,90,0	0/0:18,0:18:45.14:0,45,566	1/1:2,16:18:48.11:490,48,0	1/1:2,21:23:54.12:551,54,0	1/1:0,15:15:42.10:429,42,0	1/1:1,21:22:60.14:612,60,0	1/1:0,12:12:30.07:306,30,0	1/1:2,22:24:63.14:643,63,0	0/0:30,0:30:90.29:0,90,1132	0/0:14,0:14:36.12:0,36,453	1/1:0,14:14:36.08:367,36,0	0/0:21,0:21:54.17:0,54,679	0/0:29,0:29:81.25:0,81,1009	1/1:1,7:8:21.04:214,21,0	1/1:3,11:14:30.07:306,30,0	1/1:0,23:23:63.14:643,63,0	1/1:0,10:10:30.07:306,30,0	0/0:20,0:20:54.15:0,54,656	0/0:29,0:29:78.25:0,78,981	0/0:27,0:27:81.25:0,81,1004	0/0:10,0:10:27.09:0,27,340
chr10	6798168	.	A	AT	17323.36	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-19.917;DP=837;FS=1.412;HRun=1;HaplotypeScore=70.2940;InbreedingCoeff=0.9991;MQ=73.10;MQ0=0;MQRankSum=-2.114;QD=41.05;ReadPosRankSum=1.828;VQSLOD=5.5441;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:60.20:0,60,779	1/1:0,11:11:33.11:495,33,0	0/0:22,0:22:64.45:0,64,814	0/0:18,0:18:19.87:0,20,568	1/1:0,32:32:90.22:1299,90,0	0/0:40,0:40:99:0,117,1504	0/0:21,0:21:60.18:0,60,764	1/1:2,35:37:99:1550,105,0	0/0:31,0:31:90.28:0,90,1153	1/1:1,26:27:78.26:1169,78,0	1/1:1,24:25:66.18:964,66,0	1/1:1,37:38:99:1529,102,0	1/1:0,37:37:99:1574,105,0	1/1:1,39:40:99:1754,117,0	1/1:1,42:43:99:1799,120,0	0/0:50,0:50:99:0,150,1947	0/0:26,0:26:75.24:0,75,974	1/1:1,12:13:36.12:540,36,0	0/0:19,0:19:57.19:0,57,740	0/0:45,0:45:99:0,129,1660	1/1:1,40:41:99:1619,108,0	1/1:0,33:33:81.23:1189,81,0	1/1:0,30:30:84.28:1259,84,0	1/1:0,15:15:39.13:585,39,0	0/0:27,0:26:78.24:0,78,1000	0/0:36,1:37:60.36:0,60,1279	0/0:48,0:48:99:0,141,1830	0/0:9,0:9:27.09:0,27,351
chr10	6798817	.	C	CT	9862	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-17.894;DP=565;FS=0.653;HRun=2;HaplotypeScore=63.4077;InbreedingCoeff=0.9986;MQ=78.35;MQ0=0;MQRankSum=-1.516;QD=37.50;ReadPosRankSum=1.790;VQSLOD=5.4761;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,19:19:48.16:691,48,0	0/0:6,0:6:18.05:0,18,212	0/0:16,0:16:45.09:0,45,526	0/0:9,0:10:26.45:0,26,302	0/0:16,0:16:48.07:0,48,574	1/1:1,27:28:66.22:951,66,0	1/1:0,13:13:30.10:432,30,0	0/0:36,0:36:99:0,108,1329	1/1:3,15:18:39.13:562,39,0	0/0:21,0:21:63.20:0,63,781	0/0:19,0:19:57.17:0,57,691	0/0:22,0:22:60.18:0,60,731	0/0:27,0:27:78.25:0,78,967	0/0:17,0:17:51.15:0,51,620	0/0:32,0:32:96.29:0,96,1177	1/1:0,25:25:69.23:994,69,0	1/1:3,17:20:45.15:648,45,0	0/0:15,0:15:45.14:0,45,555	1/1:0,19:18:57.15:767,57,0	1/1:1,36:37:99:1466,105,0	0/0:14,0:14:42.13:0,42,521	0/0:21,0:21:63.17:0,63,765	0/0:15,0:15:45.14:0,45,558	0/0:15,0:15:39.11:0,39,470	1/1:0,21:21:60.20:864,60,0	1/1:1,22:23:66.22:946,66,0	1/1:2,26:28:75.25:1067,75,0	1/1:0,12:12:33.11:475,33,0
chr10	6801251	.	TTACA	T	15763.81	PASS	AB=0.889;AC=29;AF=0.518;AN=56;BaseQRankSum=-5.775;DP=657;FS=2.096;HRun=0;HaplotypeScore=133.9231;InbreedingCoeff=0.9278;MQ=77.35;MQ0=0;MQRankSum=-2.445;QD=42.72;ReadPosRankSum=3.108;VQSLOD=5.3182;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:60.21:0,60,1578	1/1:0,11:11:24.08:448,24,0	0/0:23,0:23:54.16:0,54,1325	0/0:14,0:14:36.12:0,36,900	1/1:1,21:22:57.08:899,57,0	0/0:40,0:40:99:0,108,2879	0/0:13,0:13:39.11:0,39,898	1/1:6,31:37:93.27:1627,93,0	0/0:19,0:19:51.18:0,51,1356	1/1:1,31:32:93.29:1674,93,0	1/1:2,33:35:93.23:1643,93,0	1/1:2,30:32:69.24:1266,69,0	1/1:1,29:30:69.20:1252,69,0	1/1:0,24:24:63.22:1175,63,0	1/1:3,20:23:60.21:1118,60,0	0/0:31,0:31:84.26:0,84,2124	0/0:14,0:14:42.12:0,42,1045	1/1:0,11:11:33.11:616,33,0	0/0:15,0:15:39.12:0,39,904	0/0:30,0:30:90.28:0,90,2288	1/1:1,18:19:45.15:840,45,0	1/1:4,26:30:75.17:1326,75,0	1/1:1,23:24:63.22:1175,63,0	1/1:2,13:15:33.11:616,33,0	0/0:31,0:31:93.29:0,93,2332	0/1:21,3:24:90.78:91,0,1531	0/0:27,0:27:72.17:0,72,1662	0/0:11,0:11:24.08:0,24,640
chr10	6801828	.	G	GTCTA	20019.88	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=1.212;DP=685;FS=12.386;HRun=0;HaplotypeScore=126.1303;InbreedingCoeff=0.9900;MQ=69.53;MQ0=0;MQRankSum=-9.072;QD=63.35;ReadPosRankSum=0.868;VQSLOD=6.3859;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,102,1817	1/1:0,9:9:24.08:632,24,0	0/0:12,0:12:10.37:0,10,372	0/0:11,0:11:17.65:0,18,261	1/1:6,10:16:39.12:970,39,0	0/0:27,0:27:75.22:0,75,1270	0/0:22,0:22:57.16:0,57,964	1/1:15,17:31:72.22:1680,72,0	0/0:18,0:18:51.17:0,51,938	1/1:14,21:35:78.27:1955,78,0	1/1:7,7:14:36.11:843,36,0	1/1:8,28:36:93.29:2281,93,0	1/1:3,21:24:69.22:1730,69,0	1/1:10,24:34:96.31:2381,96,0	1/1:2,29:31:90.31:2341,90,0	0/0:38,0:38:99:0,108,1957	0/0:33,0:33:96.33:0,96,1737	1/1:4,4:8:15.03:341,15,0	0/0:20,0:20:51.12:0,51,879	0/0:34,0:34:93.26:0,93,1581	1/1:6,20:26:57.20:1502,57,0	1/1:5,21:26:72.25:1864,72,0	1/1:2,9:11:24.08:629,24,0	1/1:1,13:14:33.11:870,33,0	0/0:26,0:26:72.25:0,72,1317	0/0:35,0:35:84.29:0,84,1535	0/0:33,0:33:96.31:0,96,1711	0/0:17,0:17:51.17:0,51,938
chr10	6801879	.	C	CA	10209.56	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=15.823;DP=719;FS=2.055;HRun=7;HaplotypeScore=117.4301;InbreedingCoeff=0.9810;MQ=75.33;MQ0=0;MQRankSum=-5.299;QD=28.76;ReadPosRankSum=-2.532;VQSLOD=2.9408;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:84.13:0,84,811	1/1:3,4:7:12.04:141,12,0	0/0:18,1:19:41.60:0,42,363	0/0:15,0:15:15.21:0,15,216	1/1:2,28:30:72.22:865,72,0	0/0:29,0:29:75.11:0,75,724	0/0:21,0:21:57.09:0,57,550	1/1:7,41:48:99:1472,123,0	0/0:26,0:26:75.12:0,75,724	1/1:7,29:36:87.27:1051,87,0	1/1:1,16:17:39.08:455,39,0	1/1:1,34:35:93.28:1120,93,0	1/1:1,22:23:57.17:688,57,0	1/1:6,23:29:69.21:824,69,0	1/1:3,32:35:87.27:1051,87,0	0/0:37,0:37:99:0,105,1008	0/0:35,0:35:96.14:0,96,927	1/1:0,5:5:12.04:145,12,0	0/0:25,0:25:60.09:0,60,579	0/0:36,0:36:99:0,105,1014	1/1:6,24:30:66.46:730,66,0	1/1:2,32:34:87.22:1034,87,0	1/1:1,15:16:42.09:491,42,0	1/1:2,8:10:12.04:145,12,0	0/0:22,0:22:57.09:0,57,551	0/0:27,1:28:41.88:0,42,688	0/0:33,0:33:87.13:0,87,840	0/0:5,0:5:12.02:0,12,115
chr10	6802207	.	TAACACAACCTAC	T	17839.94	PASS	AB=0.706;AC=27;AF=0.482;AN=56;BaseQRankSum=17.629;DP=691;FS=0.691;HRun=0;HaplotypeScore=350.6029;InbreedingCoeff=0.8928;MQ=76.99;MQ0=0;MQRankSum=-17.429;QD=57.18;ReadPosRankSum=2.120;VQSLOD=3.5755;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,138,7361	1/1:1,6:7:15.05:539,15,0	0/0:20,0:20:60.09:0,60,2252	0/0:25,0:25:67.96:0,68,2917	1/1:5,17:22:42.14:1297,42,0	0/0:26,0:26:66.23:0,66,3358	0/0:34,0:34:81.28:0,81,4158	1/1:22,10:32:36.12:1213,36,0	0/0:23,0:23:63.20:0,63,3121	1/1:9,18:27:54.08:1854,54,0	1/1:8,7:14:18.02:555,18,0	1/1:13,25:38:72.25:2585,72,0	1/1:6,22:27:54.19:1919,54,0	1/1:4,19:23:54.19:1920,54,0	1/1:8,28:36:78.25:2782,78,0	0/0:39,0:39:99:0,108,5887	0/0:26,0:26:78.27:0,78,4236	0/1:7,5:12:6.70:416,0,7	0/0:7,0:7:18.05:0,18,760	0/0:27,0:27:75.26:0,75,3984	1/1:16,13:29:20.74:724,21,0	1/1:5,15:20:36.12:1268,36,0	1/1:1,4:5:9.03:323,9,0	1/1:6,12:18:14.71:446,15,0	0/0:23,0:23:63.22:0,63,3069	0/0:38,1:39:0.64:0,1,5335	0/0:28,0:28:81.28:0,81,4233	0/0:14,0:14:42.14:0,42,2313
chr10	6802528	.	C	CTTT	7595.93	PASS	AB=0.586;AC=48;AF=0.857;AN=56;BaseQRankSum=-2.473;DP=608;FS=5.846;HRun=12;HaplotypeScore=147.3231;InbreedingCoeff=0.7242;MQ=62.08;MQ0=2;MQRankSum=-3.485;QD=14.41;ReadPosRankSum=-0.077;VQSLOD=2.3885;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:39:73.26:0,73,783	1/1:4,0:15:8.64:172,9,0	0/0:19,0:14:17.09:0,17,147	0/0:23,0:20:27.64:0,28,237	1/1:8,0:25:32.38:240,32,0	1/1:8,2:24:27.45:474,27,0	1/1:11,0:20:35.86:276,36,0	1/1:13,1:37:39.52:572,40,0	1/1:10,0:18:41.85:336,42,0	1/1:12,0:21:26.76:218,27,0	1/1:4,1:25:43.05:345,43,0	1/1:10,9:23:39.04:555,39,0	1/1:7,11:20:28.34:484,28,0	1/1:5,8:19:23.91:357,24,0	1/1:4,0:21:32.83:245,33,0	1/1:13,0:30:65.77:484,66,0	1/1:9,0:22:38.12:267,38,0	1/1:2,0:11:19.18:141,19,0	1/1:10,2:22:23.35:431,23,0	1/1:15,0:28:61.87:501,62,0	0/1:7,0:21:1.19:197,0,1	1/1:8,7:16:21.05:351,21,0	1/1:6,2:8:7.27:78,7,0	1/1:2,9:12:21.07:382,21,0	1/1:10,0:26:46.52:339,47,0	0/1:6,0:24:8.10:42,0,8	1/1:5,0:16:11.71:42,12,0	1/1:3,0:18:18.39:67,18,0
chr10	6802566	.	C	CT	6339.74	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-4.883;DP=579;FS=4.172;HRun=6;HaplotypeScore=121.5434;InbreedingCoeff=0.9990;MQ=64.28;MQ0=0;MQRankSum=-5.159;QD=30.05;ReadPosRankSum=2.505;VQSLOD=3.8641;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,41:45:99:1379,111,0	0/0:8,0:8:21.03:0,21,207	0/0:23,0:23:53.99:0,54,518	0/0:20,0:18:40.07:0,40,388	0/0:24,0:24:63.14:0,63,641	1/1:4,15:19:42.12:514,42,0	1/1:2,13:14:39.12:490,39,0	0/0:32,0:32:75.16:0,75,765	1/1:2,11:13:36.11:448,36,0	0/0:14,0:14:36.08:0,36,367	0/0:23,0:22:48.10:0,48,486	0/0:14,0:14:30.04:0,30,297	0/0:15,0:15:33.07:0,33,335	0/0:18,0:18:45.10:0,45,458	0/0:28,0:28:66.15:0,66,673	1/1:7,20:27:60.66:755,61,0	1/1:4,19:23:48.15:604,48,0	0/0:23,0:23:57.09:0,57,571	1/1:3,20:22:54.17:678,54,0	1/1:2,24:26:69.22:868,69,0	0/0:22,0:22:48.07:0,48,477	0/0:15,0:15:39.01:0,39,376	0/0:16,0:16:39.07:0,39,391	0/0:13,0:13:27.05:0,27,275	1/1:4,16:20:48.15:604,48,0	0/0:22,0:22:60.01:0,60,587	0/0:20,0:20:48.11:0,48,489	0/0:18,0:18:36.07:0,36,363
chr10	6803601	.	T	TCACC	28636.49	PASS	AB=0.586;AC=33;AF=0.589;AN=56;BaseQRankSum=-16.577;DP=780;FS=7.180;HRun=0;HaplotypeScore=114.5035;InbreedingCoeff=0.9051;MQ=65.82;MQ0=1;MQRankSum=-5.586;QD=64.50;ReadPosRankSum=1.363;VQSLOD=7.0982;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,138,2500	1/1:0,17:19:57.15:1458,57,0	0/0:26,0:24:66.23:0,66,1213	0/0:25,0:24:62.58:0,63,1084	1/1:1,23:30:72.16:1728,72,0	0/0:32,0:32:96.31:0,96,1750	0/0:22,0:22:63.21:0,63,1155	1/1:13,24:38:99:2556,99,0	0/0:27,1:28:4.23:0,4,1347	1/1:1,16:20:57.20:1482,57,0	1/1:1,21:26:63.22:1674,63,0	1/1:3,24:34:81.28:2109,81,0	1/1:1,22:25:72.25:1895,72,0	1/1:1,20:22:66.23:1720,66,0	1/1:3,34:37:99:2716,102,0	0/0:38,0:38:99:0,114,2108	0/0:45,0:45:99:0,129,2406	0/1:5,10:17:39.60:687,0,40	0/0:19,0:19:51.17:0,51,946	0/0:32,0:32:84.27:0,84,1508	1/1:4,30:38:78.27:2077,78,0	1/1:4,18:29:66.23:1709,66,0	1/1:3,12:18:44.84:1175,45,0	1/1:6,27:34:52.33:1821,52,0	0/0:19,0:19:57.20:0,57,1064	1/1:3,9:17:51.15:1197,51,0	1/1:2,27:32:78.27:2071,78,0	1/1:0,7:7:21.07:560,21,0
chr10	6804955	.	TAAAC	T	5332.37	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-6.817;DP=585;FS=5.701;HRun=0;HaplotypeScore=118.9733;InbreedingCoeff=0.9528;MQ=69.59;MQ0=1;MQRankSum=-2.150;QD=31.55;ReadPosRankSum=2.254;VQSLOD=4.7307;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:60.21:0,60,1482	0/0:8,0:8:21.07:0,21,395	0/0:27,0:27:37.22:0,37,1141	0/0:12,0:12:0.49:0,0,356	0/0:21,0:21:57.20:0,57,1078	1/1:5,13:18:30.10:521,30,0	1/1:6,10:16:24.07:402,24,0	0/0:29,0:29:74.37:0,74,1288	1/1:3,15:18:33.11:573,33,0	0/0:26,0:26:75.26:0,75,1324	0/0:11,0:11:27.09:0,27,504	0/0:25,0:25:56.93:0,57,1079	0/0:21,0:21:56.93:0,57,1017	0/0:12,0:12:36.12:0,36,687	0/0:32,0:32:90.31:0,90,1680	1/1:11,24:35:66.23:1132,66,0	1/1:5,22:27:51.17:886,51,0	0/0:23,0:23:50.37:0,50,796	1/1:3,7:10:24.04:374,24,0	1/1:6,15:20:39.13:664,39,0	0/0:21,0:21:57.03:0,57,1021	0/0:21,0:21:56.40:0,56,927	0/0:20,0:20:52.06:0,52,945	0/0:22,0:22:47.67:0,48,836	1/1:7,17:24:45.15:781,45,0	0/0:25,0:25:66.22:0,66,1601	0/0:29,0:29:78.27:0,78,1900	0/0:8,0:8:12.04:0,12,272
chr10	6805623	.	G	GGAGGA	21153.74	PASS	AB=0.933;AC=29;AF=0.518;AN=56;BaseQRankSum=-16.356;DP=621;FS=13.878;HRun=0;HaplotypeScore=102.2268;InbreedingCoeff=0.9281;MQ=72.38;MQ0=0;MQRankSum=-7.221;QD=60.79;ReadPosRankSum=2.101;VQSLOD=5.2330;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:69.22:0,69,1342	1/1:1,11:12:30.10:904,30,0	0/0:24,0:24:44.28:0,44,811	0/0:20,0:18:39.10:0,39,672	1/1:2,27:29:72.20:2075,72,0	0/0:22,0:22:63.13:0,63,1075	0/0:21,0:21:51.16:0,51,991	1/1:10,25:37:99:2346,102,0	0/0:18,0:18:51.16:0,51,991	1/1:1,19:20:57.06:1255,57,0	1/1:0,17:18:36.12:1063,36,0	1/1:6,15:21:39.13:1175,39,0	1/1:0,21:21:57.20:1694,57,0	1/1:1,27:28:75.26:2259,75,0	1/1:3,26:29:72.25:2156,72,0	0/0:27,0:27:75.24:0,75,1475	0/0:14,0:14:39.12:0,39,749	1/1:4,12:16:27.09:813,27,0	0/0:25,0:25:60.08:0,60,1083	0/0:25,0:25:72.23:0,72,1403	1/1:2,21:24:54.19:1627,54,0	1/1:3,17:21:39.13:1154,39,0	1/1:4,14:22:36.12:1085,36,0	1/1:2,19:22:48.16:1446,48,0	0/0:20,0:20:48.16:0,48,966	0/1:26,2:28:99:102,0,1273	0/0:19,0:19:51.17:0,51,1015	0/0:10,0:10:30.10:0,30,604
chr10	6805813	.	T	TA	6793.79	PASS	AB=0.598;AC=31;AF=0.554;AN=56;BaseQRankSum=-9.121;DP=490;FS=1.321;HRun=10;HaplotypeScore=60.4184;InbreedingCoeff=0.7549;MQ=71.61;MQ0=1;MQRankSum=-0.568;QD=21.16;ReadPosRankSum=-0.211;VQSLOD=5.6473;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:23.93:0,24,193	1/1:2,7:9:18.05:192,18,0	0/0:9,0:9:8.08:0,8,51	0/0:7,0:7:5.95:0,6,46	1/1:8,23:31:38.51:614,39,0	0/0:24,0:26:42.98:0,43,332	0/0:12,0:13:12.39:0,12,208	1/1:19,23:42:45.59:680,46,0	0/0:18,0:18:38.93:0,39,320	1/1:6,16:22:26.49:487,26,0	1/1:3,18:22:49.22:460,49,0	0/1:6,13:19:10.13:313,0,10	1/1:4,20:24:57.13:597,57,0	1/1:6,13:19:45.42:462,45,0	1/1:5,28:33:25.91:686,26,0	0/0:16,1:17:6.99:0,7,263	0/0:10,0:10:26.95:0,27,222	1/1:0,6:6:18.05:192,18,0	0/0:19,1:20:18.93:0,19,358	0/0:19,0:19:38.89:0,39,320	0/1:3,7:10:3.59:171,0,4	1/1:1,9:10:24.06:256,24,0	1/1:6,10:16:30.04:308,30,0	1/1:0,5:5:15.04:160,15,0	0/0:14,1:16:9.03:0,9,266	1/1:5,16:23:38.17:574,38,0	1/1:7,12:19:42.11:447,42,0	0/1:4,7:11:22.22:197,0,22
chr10	6805874	.	C	CA	8403.82	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-12.782;DP=502;FS=9.828;HRun=3;HaplotypeScore=57.1180;InbreedingCoeff=0.9961;MQ=80.30;MQ0=0;MQRankSum=-2.092;QD=39.27;ReadPosRankSum=2.674;VQSLOD=4.4695;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,8:9:15.05:225,15,0	0/0:11,0:11:29.97:0,30,389	0/0:15,0:14:27.82:0,28,348	0/0:17,0:17:42.13:0,42,543	0/0:32,0:32:93.27:0,93,1171	1/1:0,25:25:54.18:808,54,0	1/1:1,16:17:39.13:585,39,0	0/0:42,0:41:99:0,117,1458	1/1:1,11:12:30.10:450,30,0	0/0:12,0:12:33.11:0,33,424	0/0:14,0:14:39.08:0,39,480	0/0:17,0:17:48.16:0,48,623	0/0:18,0:18:54.18:0,54,699	0/0:25,0:25:75.24:0,75,973	0/0:30,0:30:84.23:0,84,1070	1/1:0,26:26:69.23:1034,69,0	1/1:0,8:8:24.08:360,24,0	0/0:10,0:10:30.07:0,30,350	1/1:0,19:19:57.19:851,57,0	1/1:2,25:27:75.25:1116,75,0	0/0:19,0:19:54.18:0,54,700	0/0:11,0:11:30.10:0,30,389	0/0:7,0:7:21.05:0,21,258	0/0:8,0:8:24.08:0,24,312	1/1:0,21:21:57.19:854,57,0	1/1:1,19:20:60.20:891,60,0	1/1:1,18:19:50.89:758,51,0	1/1:1,10:11:33.09:472,33,0
chr10	6807385	.	A	AAG	7829.23	PASS	AC=26;AF=0.481;AN=54;BaseQRankSum=-13.808;DP=378;FS=13.093;HRun=0;HaplotypeScore=40.2383;InbreedingCoeff=0.9556;MQ=71.95;MQ0=0;MQRankSum=0.118;QD=51.17;ReadPosRankSum=-0.631;VQSLOD=4.3369;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:57.17:0,57,817	1/1:1,3:4:9.03:169,9,0	0/0:10,0:10:27.09:0,27,372	0/0:7,0:6:9.03:0,9,133	1/1:0,19:18:54.19:1012,54,0	0/0:14,0:14:42.14:0,42,619	0/0:7,0:7:18.06:0,18,265	1/1:2,33:34:99:1812,102,0	0/0:10,0:10:30.10:0,30,442	1/1:0,20:20:60.19:1092,60,0	1/1:0,17:17:51.17:936,51,0	1/1:0,5:5:15.05:281,15,0	1/1:1,6:7:18.06:337,18,0	1/1:0,11:11:33.11:618,33,0	1/1:0,13:13:33.11:618,33,0	0/0:14,0:14:42.14:0,42,619	0/0:16,0:16:48.13:0,48,681	1/1:0,4:4:6.02:112,6,0	0/0:22,0:22:62.88:0,63,892	0/0:15,0:15:45.15:0,45,658	1/1:0,6:6:12.04:225,12,0	1/1:1,5:6:15.05:281,15,0	1/1:0,6:6:18.06:337,18,0	./.	0/0:18,0:18:54.17:0,54,778	0/0:26,1:27:22.05:0,22,1048	0/0:24,0:24:72.24:0,72,1057	0/0:21,0:21:57.18:0,57,822
chr10	6807895	.	CAA	C	1647.84	PASS	AB=0.757;AC=16;AF=0.286;AN=56;BaseQRankSum=0.874;DP=533;FS=17.173;HRun=17;HaplotypeScore=99.5347;InbreedingCoeff=0.8051;MQ=76.31;MQ0=0;MQRankSum=6.608;QD=9.42;ReadPosRankSum=8.783;VQSLOD=-0.0370;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:10:9.49:0,9,34	0/0:6,0:8:19.96:0,20,172	0/0:26,0:17:5.98:0,6,54	0/1:23,0:18:15.30:15,0,76	0/0:18,0:23:50.20:0,50,447	1/1:4,22:29:42.11:490,42,0	1/1:2,5:8:17.68:130,18,0	0/0:20,0:29:57.10:0,57,543	1/1:2,11:13:29.89:237,30,0	0/0:23,0:29:56.39:0,56,583	0/0:18,0:20:32.43:0,32,288	0/0:19,0:21:56.88:0,57,557	0/0:11,0:13:27.03:0,27,293	0/0:16,0:18:27.10:0,27,348	0/0:17,0:22:45.05:0,45,472	1/1:11,13:27:18.28:249,18,0	1/1:2,9:11:23.86:190,24,0	0/0:6,0:8:18.47:0,18,187	1/1:4,6:16:13.65:167,14,0	0/1:8,9:21:6.99:115,0,7	0/0:2,0:5:14.93:0,15,129	0/0:20,0:23:60.05:0,60,661	0/0:14,0:17:31.77:0,32,327	0/0:11,0:13:18.94:0,19,170	1/1:7,14:24:28.93:252,29,0	0/0:9,0:20:53.95:0,54,510	0/0:17,0:27:23.86:0,24,261	0/0:9,0:21:45.83:0,46,404
chr10	6807920	.	C	CTCAAGAAAATACTCCATAACCTT	43893.88	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=-3.561;DP=534;FS=9.167;HRun=0;HaplotypeScore=302.7360;InbreedingCoeff=0.9422;MQ=64.20;MQ0=0;MQRankSum=-16.050;QD=155.65;ReadPosRankSum=0.518;VQSLOD=3.2424;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:9,0:9:4.12:4,0,1180	1/1:2,4:10:18.06:1775,18,0	0/0:24,0:14:28.21:0,28,707	0/0:12,0:12:24.68:0,25,873	1/1:21,5:26:63.07:3457,63,0	0/0:34,0:34:99:0,102,5497	0/0:9,0:9:24.07:0,24,1088	1/1:39,0:39:96.33:6238,96,0	0/0:19,0:19:54.16:0,54,2820	1/1:15,2:26:60.12:4099,60,0	1/1:19,3:22:57.11:3796,57,0	1/1:13,5:18:45.15:3655,45,0	1/1:6,1:14:18.06:1683,18,0	1/1:16,1:16:42.14:2922,42,0	1/1:28,3:31:81.23:5582,81,0	0/0:24,0:24:60.19:0,60,3093	0/0:15,0:15:42.13:0,42,2177	1/1:3,1:5:15.03:1071,15,0	0/0:16,0:16:45.13:0,45,2170	0/0:22,0:22:60.14:0,60,2532	1/1:7,0:7:18.06:788,18,0	1/1:21,2:23:57.15:4156,57,0	1/1:14,2:16:45.15:2991,45,0	1/1:17,0:18:27.51:1677,28,0	0/0:22,0:22:54.17:0,54,2896	0/0:21,0:21:51.11:0,51,2070	0/0:20,0:20:35.89:0,36,1517	0/0:13,0:13:30.08:0,30,1187
chr10	6808008	.	AAGC	A	10053.50	PASS	AB=0.525;AC=27;AF=0.482;AN=56;BaseQRankSum=17.594;DP=588;FS=2.304;HRun=0;HaplotypeScore=107.7627;InbreedingCoeff=0.9240;MQ=74.11;MQ0=0;MQRankSum=-6.016;QD=36.43;ReadPosRankSum=2.555;VQSLOD=5.8453;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:54.19:0,54,1160	1/1:0,3:3:9.03:141,9,0	0/0:16,0:16:21.72:0,22,609	0/0:11,0:11:30.10:0,30,620	1/1:3,23:26:60.16:912,60,0	0/0:25,0:25:66.21:0,66,1389	0/0:21,0:21:60.21:0,60,1299	1/1:6,16:22:48.16:751,48,0	0/0:22,0:22:54.19:0,54,1161	1/1:3,24:26:72.25:1127,72,0	1/1:3,14:17:36.12:563,36,0	1/1:0,23:23:57.19:892,57,0	1/1:1,20:20:57.19:890,57,0	1/1:1,16:16:39.13:610,39,0	1/1:3,26:29:63.21:986,63,0	0/0:33,0:33:90.31:0,90,1932	0/0:30,0:30:81.28:0,81,1735	1/1:1,16:17:48.16:751,48,0	0/0:17,0:17:51.18:0,51,1094	0/0:34,0:34:87.30:0,87,1883	1/1:1,7:8:18.06:282,18,0	1/1:6,12:18:36.12:563,36,0	0/1:2,19:21:10.75:744,0,11	1/1:3,24:27:53.77:844,54,0	0/0:20,0:20:60.21:0,60,1282	0/0:24,1:25:25.35:0,25,1409	0/0:30,0:30:81.26:0,81,1700	0/0:9,0:9:27.09:0,27,567
chr10	6808174	.	CAA	C	2078.23	PASS	AB=0.776;AC=16;AF=0.286;AN=56;BaseQRankSum=1.153;DP=595;FS=3.213;HRun=15;HaplotypeScore=91.1558;InbreedingCoeff=0.8207;MQ=70.79;MQ0=3;MQRankSum=5.916;QD=10.29;ReadPosRankSum=10.234;VQSLOD=1.8424;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:25,1:32:10.35:0,10,171	0/0:6,0:6:12.04:0,12,143	0/0:23,0:15:12.77:0,13,106	0/1:19,0:15:14.51:15,0,117	0/0:31,0:31:63.41:0,63,573	1/1:5,13:21:26.37:312,26,0	1/1:5,12:17:29.89:264,30,0	0/0:29,0:27:61.98:0,62,710	1/1:3,8:12:17.62:144,18,0	0/0:35,0:33:72.09:0,72,802	0/0:13,0:20:35.84:0,36,305	0/0:19,0:19:39.06:0,39,442	0/0:15,0:14:30:0,30,334	0/0:13,0:11:22.78:0,23,213	0/0:27,0:27:58.90:0,59,622	1/1:11,17:29:13.93:263,14,0	1/1:6,15:21:14.39:292,14,0	0/0:21,0:20:36.54:0,37,395	1/1:9,14:23:38.45:325,38,0	1/1:11,17:31:43.50:380,44,0	0/0:10,0:10:14.73:0,15,129	0/0:17,0:17:30.04:0,30,341	0/0:19,0:19:32.92:0,33,321	0/0:18,0:17:11.60:0,12,121	0/1:5,20:27:2.86:282,0,3	0/0:23,0:25:38.55:0,39,422	0/0:24,0:24:54.06:0,54,598	0/0:5,0:8:10.99:0,11,82
chr10	6808935	.	G	GAA	4964.61	PASS	AB=0.970;AC=17;AF=0.304;AN=56;BaseQRankSum=-12.400;DP=655;FS=1.716;HRun=10;HaplotypeScore=128.0325;InbreedingCoeff=0.9219;MQ=78.68;MQ0=4;MQRankSum=-0.044;QD=24.46;ReadPosRankSum=-1.919;VQSLOD=3.6201;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:58:99:0,150,1481	0/0:10,0:10:30.06:0,30,305	0/0:30,0:23:11.44:0,11,295	0/1:31,0:21:6.82:7,0,213	0/0:23,0:23:60.03:0,60,609	1/1:1,17:21:42.14:610,42,0	1/1:1,12:14:30.10:448,30,0	0/0:25,0:25:56.99:0,57,564	1/1:1,13:16:39.12:557,39,0	0/0:26,0:26:65.79:0,66,666	0/0:11,0:11:26.96:0,27,273	0/0:29,0:29:78.06:0,78,784	0/0:25,0:25:56.84:0,57,563	0/0:28,0:28:78.04:0,78,778	0/0:29,0:29:87.12:0,87,859	1/1:9,26:35:71.20:984,71,0	1/1:5,23:27:54.18:805,54,0	0/0:17,0:17:48.09:0,48,488	1/1:10,10:20:45.13:628,45,0	1/1:4,14:20:23.75:589,24,0	0/0:22,0:22:57.02:0,57,578	0/0:20,0:20:47.88:0,48,462	0/0:21,0:21:60.05:0,60,608	0/0:20,0:20:54.01:0,54,537	1/1:4,8:15:26.56:335,27,0	0/0:21,0:22:38.69:0,39,565	0/0:23,0:23:42.46:0,42,445	0/0:10,0:11:17.94:0,18,263
chr10	6810667	.	CGAGTAAAGCGAAT	C	8489.98	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=12.633;DP=445;FS=2.188;HRun=0;HaplotypeScore=163.9209;InbreedingCoeff=0.9549;MQ=88.16;MQ0=0;MQRankSum=-12.509;QD=79.35;ReadPosRankSum=1.931;VQSLOD=4.9023;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,135,8054	0/0:6,0:6:15.05:0,15,981	0/0:14,0:14:36.10:0,36,1563	0/0:21,0:21:45.91:0,46,2404	0/0:14,0:14:42.14:0,42,2599	1/1:1,14:15:42.14:1663,42,0	1/1:2,12:14:33.11:1306,33,0	0/0:17,0:17:48.16:0,48,2769	1/1:1,7:8:15.05:594,15,0	0/0:19,0:19:54.19:0,54,3413	0/0:11,0:11:33.11:0,33,1934	0/0:15,0:15:45.15:0,45,2633	0/0:16,0:16:45.14:0,45,2407	0/0:15,0:15:39.10:0,39,2305	0/0:12,0:12:36.12:0,36,2319	1/1:5,9:14:24.08:950,24,0	1/1:5,23:28:36.12:1426,36,0	0/0:24,0:24:72.23:0,72,4257	1/1:1,12:13:36.12:1364,36,0	1/1:0,4:4:9.03:356,9,0	0/0:18,0:18:45.15:0,45,2564	0/0:15,0:15:45.15:0,45,2906	0/0:13,0:13:39.13:0,39,2396	0/0:28,0:28:81.28:0,81,4922	1/1:1,10:11:21.07:831,21,0	0/0:15,0:15:39.13:0,39,2420	0/0:17,0:17:45.15:0,45,2452	0/0:1,0:1:3.01:0,3,197
chr10	6811212	.	T	TTTC	1651.03	PASS	AB=0.960;AC=25;AF=0.446;AN=56;BaseQRankSum=5.686;DP=341;FS=3.181;HRun=0;HaplotypeScore=74.5879;InbreedingCoeff=-0.0638;MQ=69.14;MQ0=0;MQRankSum=-0.691;QD=8.09;ReadPosRankSum=-0.999;VQSLOD=2.6992;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:19:27.98:0,28,220	0/0:4,0:4:3.23:0,3,52	0/1:12,0:10:3.47:3,0,120	0/1:16,0:13:27.99:28,0,90	1/1:4,0:5:7.21:86,7,0	0/0:22,0:22:49.98:0,50,790	0/0:16,0:16:48.12:0,48,650	0/1:18,0:18:77.03:77,0,161	0/0:13,0:13:15.87:0,16,342	0/1:7,4:15:24.02:220,0,24	1/1:1,0:5:8.24:92,8,0	0/1:8,0:8:34.11:82,0,34	0/1:6,0:6:47.86:54,0,48	0/1:5,0:5:27.32:63,0,27	0/1:8,0:8:15.53:110,0,16	0/0:14,0:14:17.58:0,18,508	0/0:34,0:34:99:0,99,1304	0/1:27,0:27:99:289,0,109	0/0:15,0:15:43.58:0,44,469	0/1:3,0:4:30.19:30,0,59	1/1:7,0:7:10.24:83,10,0	1/1:5,0:5:11.87:91,12,0	1/1:6,1:7:6.72:50,7,0	0/1:10,0:10:3.14:106,0,3	0/1:8,0:8:8.24:8,0,92	0/1:19,0:19:48.49:168,0,48	0/1:10,0:10:45.59:91,0,46	0/1:7,0:7:1.01:92,0,1
chr10	6811271	.	CT	C	649.01	PASS	AB=0.833;AC=7;AF=0.125;AN=56;BaseQRankSum=5.136;DP=258;FS=34.617;HRun=10;HaplotypeScore=50.8512;InbreedingCoeff=0.5407;MQ=76.27;MQ0=0;MQRankSum=-2.017;QD=15.45;ReadPosRankSum=0.495;VQSLOD=1.6922;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:7:15.04:0,15,166	0/0:3,0:3:6.02:0,6,66	0/0:6,0:6:9.02:0,9,96	0/0:9,0:8:9.85:0,10,65	0/0:6,0:6:12.03:0,12,133	0/0:13,0:13:27.06:0,27,284	0/0:8,0:8:21.06:0,21,232	0/0:26,0:26:60.15:0,60,652	0/0:6,0:6:12.03:0,12,132	0/1:4,1:5:14.03:14,0,88	0/0:6,0:6:9.02:0,9,98	0/0:6,0:6:12.03:0,12,133	0/0:5,0:5:11.97:0,12,118	0/0:3,0:3:6.02:0,6,66	0/0:6,0:6:12.03:0,12,133	0/0:6,0:6:12.03:0,12,131	0/0:37,0:37:99:0,99,1081	0/0:20,1:21:16.03:0,16,386	0/0:10,0:10:12.03:0,12,133	0/0:4,0:4:12.03:0,12,133	0/0:2,0:2:3.01:0,3,33	0/0:2,0:2:3.01:0,3,33	0/0:7,0:7:12.03:0,12,130	0/0:4,0:4:3.01:0,3,33	0/0:11,0:11:24.06:0,24,265	1/1:4,12:16:5.81:279,6,0	1/1:0,8:8:23.99:208,24,0	1/1:1,12:13:32.99:286,33,0
chr10	6811392	.	G	GT	907.50	PASS	AB=0.813;AC=6;AF=0.111;AN=54;BaseQRankSum=-4.392;DP=223;FS=5.367;HRun=6;HaplotypeScore=22.2073;InbreedingCoeff=0.4240;MQ=68.52;MQ0=0;MQRankSum=-0.938;QD=23.27;ReadPosRankSum=0.594;VQSLOD=1.7765;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:42.10:0,42,428	0/0:2,0:2:6.01:0,6,61	0/1:7,0:5:0.99:1,0,27	0/0:3,0:3:3.01:0,3,31	0/0:7,0:7:18.04:0,18,183	0/0:15,0:15:45.08:0,45,451	0/0:5,0:5:9.02:0,9,92	0/0:31,0:31:81.15:0,81,814	0/0:2,0:2:6.01:0,6,61	0/0:5,0:5:15.03:0,15,149	0/0:4,0:4:12.03:0,12,122	0/0:3,0:3:9.02:0,9,92	0/0:5,0:5:15.03:0,15,153	0/0:5,0:5:15.03:0,15,153	0/0:1,0:1:3.01:0,3,31	0/0:3,0:3:9.02:0,9,92	0/0:31,0:31:81.15:0,81,816	0/0:15,0:15:45.05:0,45,442	0/0:11,0:11:27.06:0,27,275	0/0:3,0:3:6.01:0,6,61	0/0:2,0:2:6.01:0,6,61	./.	0/0:1,0:1:3.01:0,3,31	0/0:6,0:6:18.04:0,18,184	0/0:9,0:9:27.04:0,27,267	0/1:4,6:10:37.15:202,0,37	1/1:0,11:11:33.11:415,33,0	1/1:0,11:11:33.11:415,33,0
chr10	6812138	.	CTG	C	1274.11	PASS	AB=0.919;AC=40;AF=0.800;AN=50;BaseQRankSum=4.802;DP=487;FS=1.923;HRun=0;HaplotypeScore=88.4554;InbreedingCoeff=0.1043;MQ=46.65;MQ0=9;MQRankSum=-3.466;QD=3.38;ReadPosRankSum=2.711;VQSLOD=2.1917;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:28:22.59:108,23,0	1/1:2,3:5:9.02:99,9,0	./.	./.	1/1:8,2:11:8.86:80,9,0	1/1:12,0:12:2.84:14,3,0	0/1:21,1:21:9.12:9,0,270	0/1:28,0:23:14.82:56,0,15	0/1:8,0:8:21.05:21,0,116	1/1:10,4:12:14.71:127,15,0	1/1:10,5:16:12.03:133,12,0	1/1:11,0:15:8.52:41,9,0	1/1:6,0:11:5.68:28,6,0	1/1:16,0:23:22.73:112,23,0	1/1:11,3:16:14.84:134,15,0	0/0:16,1:17:9.03:0,9,133	0/0:30,1:32:12.93:0,13,302	0/1:15,2:17:24.36:68,0,24	1/1:14,1:15:2.96:33,3,0	0/1:11,1:11:18.12:18,0,165	1/1:26,1:24:3.01:32,3,0	1/1:10,0:12:2.97:20,3,0	1/1:5,0:9:8.52:42,9,0	1/1:14,0:15:2.04:6,2,0	0/1:10,3:14:54.29:54,0,77	1/1:22,0:30:25.57:125,26,0	1/1:9,0:13:11.36:56,11,0	./.
chr10	6812184	.	GTC	G	324.25	PASS	AB=0.976;AC=14;AF=0.250;AN=56;BaseQRankSum=1.428;DP=463;FS=1.835;HRun=0;HaplotypeScore=103.4546;InbreedingCoeff=0.2315;MQ=59.10;MQ0=25;MQRankSum=2.220;QD=1.61;ReadPosRankSum=1.489;VQSLOD=2.1056;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:28:28.16:28,0,53	0/0:6,0:7:17.90:0,18,188	0/0:41,0:13:18.11:0,18,254	0/1:45,0:9:15.96:16,0,39	0/0:13,0:14:17.95:0,18,225	1/1:8,0:8:8.06:26,8,0	0/1:20,0:18:48.16:61,0,48	0/0:31,0:29:78.03:0,78,912	1/1:5,0:5:7.93:32,8,0	0/0:20,0:18:40.65:0,41,415	0/0:12,0:10:14.30:0,14,138	0/1:8,0:8:9.02:9,0,73	0/0:13,0:13:32.60:0,33,412	0/1:16,0:16:1.47:1,0,218	0/0:11,0:13:21.02:0,21,232	1/1:17,0:16:18.14:62,18,0	0/1:20,4:22:7.48:170,0,7	0/0:17,0:17:14.99:0,15,260	0/1:20,1:20:72.07:72,0,121	0/0:17,0:17:9.72:0,10,96	0/0:12,0:12:10.33:0,10,182	0/0:10,0:10:15.43:0,15,208	0/0:7,0:7:10.44:0,10,98	0/0:14,0:12:18.03:0,18,257	0/1:8,0:7:5.45:5,0,9	0/0:21,0:20:50.35:0,50,565	0/0:10,0:10:24.03:0,24,301	0/0:2,0:2:3.01:0,3,50
chr10	6812186	.	CTT	C	1581.15	PASS	AB=0.951;AC=20;AF=0.357;AN=56;BaseQRankSum=-2.339;DP=546;FS=9.760;HRun=14;HaplotypeScore=114.5346;InbreedingCoeff=0.8034;MQ=55.46;MQ0=30;MQRankSum=3.368;QD=7.46;ReadPosRankSum=5.434;VQSLOD=0.4366;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:13,14:28:28.95:252,29,0	0/0:4,0:7:14.99:0,15,147	0/0:40,0:13:17.01:0,17,179	0/1:42,0:9:6.22:6,0,18	0/0:17,0:21:38.73:0,39,319	1/1:4,4:7:11.94:110,12,0	1/1:8,12:19:23.94:222,24,0	0/0:34,0:34:69.78:0,70,692	1/1:0,5:5:12.01:111,12,0	0/0:14,0:20:44.32:0,44,398	0/0:12,0:14:35.17:0,35,255	0/1:11,1:12:10.84:11,0,131	0/0:24,0:24:47.68:0,48,427	0/0:20,0:20:23.60:0,24,266	0/0:17,0:20:47.60:0,48,369	1/1:4,14:19:18.98:272,19,0	1/1:10,15:23:41.76:371,42,0	0/0:14,0:20:39.38:0,39,351	1/1:9,9:20:29.38:240,29,0	1/1:7,9:17:7.97:101,8,0	0/0:11,0:13:26.58:0,27,227	0/0:14,0:14:31.63:0,32,291	0/0:8,0:8:12.09:0,12,114	0/0:14,0:11:22.51:0,23,234	1/1:3,3:7:11.36:93,11,0	0/0:18,0:27:70.78:0,71,600	0/0:20,0:22:53.73:0,54,468	0/0:2,0:2:3.01:0,3,42
chr10	6812205	.	CT	C	1746.68	PASS	AB=0.788;AC=27;AF=0.500;AN=54;BaseQRankSum=-2.103;DP=515;FS=33.835;HRun=11;HaplotypeScore=97.2493;InbreedingCoeff=0.5803;MQ=42.60;MQ0=34;MQRankSum=-1.820;QD=5.98;ReadPosRankSum=1.492;VQSLOD=-0.1142;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:32:45.89:0,46,262	1/1:2,4:6:11.96:97,12,0	0/0:8,0:2:1.25:0,1,3	./.	0/1:11,10:20:3.23:83,0,3	0/1:16,3:19:37.97:38,0,227	0/0:18,0:16:18.04:0,18,191	1/1:14,12:17:20.57:192,21,0	0/0:13,0:13:30.06:0,30,308	0/1:11,9:19:21.61:124,0,22	0/1:11,5:14:18.88:62,0,19	1/1:6,9:15:23.53:195,24,0	1/1:12,13:25:35.69:295,36,0	1/1:13,5:17:11.20:97,11,0	1/1:10,9:19:19.50:169,20,0	0/1:25,2:26:6.29:6,0,317	0/0:32,1:31:24.99:0,25,441	1/1:18,5:22:16.74:159,17,0	0/0:22,0:21:36.06:0,36,371	0/0:13,0:12:18:0,18,172	1/1:5,4:9:11.01:80,11,0	1/1:8,10:16:20.91:172,21,0	1/1:3,6:10:16.95:128,17,0	1/1:13,3:9:5.87:49,6,0	0/0:14,0:12:24.53:0,25,257	0/0:24,0:23:41.32:0,41,382	0/0:21,0:19:33.47:0,33,337	0/0:5,0:2:2.98:0,3,21
chr10	6813836	.	G	GA	8824.86	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-7.820;DP=657;FS=3.381;HRun=9;HaplotypeScore=84.2037;InbreedingCoeff=0.9497;MQ=74.15;MQ0=0;MQRankSum=-0.074;QD=20.43;ReadPosRankSum=0.052;VQSLOD=5.2519;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,0:50:77.01:387,77,0	1/1:1,6:7:12.03:133,12,0	0/0:22,0:22:20.48:0,20,258	0/0:19,0:17:14.67:0,15,166	1/1:4,20:24:45.08:479,45,0	0/0:23,0:23:62.98:0,63,545	0/0:20,1:21:29.81:0,30,488	1/1:8,27:35:34.12:798,34,0	0/0:17,0:17:41.99:0,42,364	1/1:6,11:17:36.06:383,36,0	1/1:8,15:23:65.58:649,66,0	1/1:4,28:32:60.16:664,60,0	1/1:5,18:23:28.12:525,28,0	1/1:2,19:21:39.11:432,39,0	1/1:7,19:26:71.08:719,71,0	0/0:33,1:35:64.81:0,65,776	0/0:26,0:26:74.95:0,75,645	1/1:1,18:19:42.11:465,42,0	0/0:15,0:15:35.99:0,36,312	0/0:27,0:28:70.87:0,71,589	1/1:3,14:17:31.33:334,31,0	1/1:3,16:19:36.08:388,36,0	1/1:7,20:29:56.82:588,57,0	1/1:2,21:24:56.99:612,57,0	0/0:17,1:18:17.80:0,18,383	1/1:7,24:32:61.51:709,62,0	1/1:3,15:18:10.57:340,11,0	1/1:2,13:16:0.85:221,1,0
chr10	6814619	.	G	GT	1398.90	PASS	AB=0.578;AC=5;AF=0.089;AN=56;BaseQRankSum=-2.843;DP=565;FS=6.782;HRun=7;HaplotypeScore=62.7374;InbreedingCoeff=0.8825;MQ=83.12;MQ0=0;MQRankSum=-0.940;QD=23.32;ReadPosRankSum=2.254;VQSLOD=3.7935;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:68.97:0,69,634	0/0:8,0:8:21.03:0,21,203	0/0:28,0:25:36.04:0,36,302	0/0:17,0:16:34.81:0,35,270	0/0:7,0:7:18.03:0,18,174	0/0:32,0:32:90.12:0,90,857	0/0:19,0:19:57:0,57,515	0/0:33,0:33:81.03:0,81,755	0/0:18,0:18:54.06:0,54,510	0/0:14,0:14:33.02:0,33,312	0/0:17,0:17:45.07:0,45,434	0/0:16,0:16:42.05:0,42,400	0/0:23,0:23:63.08:0,63,602	0/0:22,0:22:60.04:0,60,562	0/0:33,0:33:93.12:0,93,885	0/0:23,0:23:66.08:0,66,627	0/0:25,0:25:69:0,69,641	0/0:23,0:23:57.05:0,57,542	0/0:24,0:24:53.99:0,54,486	0/0:11,0:11:33.04:0,33,313	0/0:22,0:22:57.07:0,57,544	0/0:14,0:14:42.04:0,42,396	0/0:15,0:15:39.02:0,39,363	0/0:22,0:22:57.02:0,57,536	0/0:13,0:13:39.05:0,39,368	0/1:7,19:26:0.89:591,0,1	1/1:2,21:22:54.16:647,54,0	1/1:2,9:11:24.07:290,24,0
chr10	6814864	.	AT	A	1396.72	PASS	AB=0.749;AC=25;AF=0.694;AN=36;BaseQRankSum=3.779;DP=99;FS=1.571;HRun=1;HaplotypeScore=28.4364;InbreedingCoeff=0.3473;MQ=40.83;MQ0=9;MQRankSum=-2.132;QD=19.67;ReadPosRankSum=1.146;VQSLOD=3.7784;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:5,0:5:3.53:4,0,5	1/1:0,1:1:3.01:40,3,0	0/0:6,0:1:0.47:0,0,1	./.	1/1:1,1:2:6.02:80,6,0	./.	./.	1/1:0,15:12:36.12:482,36,0	./.	1/1:0,2:2:6.02:80,6,0	1/1:0,4:4:12.04:160,12,0	1/1:0,3:3:6.02:80,6,0	1/1:0,3:3:9.03:120,9,0	./.	1/1:0,6:6:15.05:200,15,0	0/0:2,0:2:6.02:0,6,76	0/0:13,0:11:15.05:0,15,188	0/1:5,6:7:20.42:166,0,20	0/0:2,0:2:6.02:0,6,76	./.	./.	./.	./.	0/1:1,2:3:29.08:71,0,29	./.	1/1:3,0:3:3.33:8,3,0	1/1:7,0:6:5.63:15,6,0	1/1:6,0:5:4.96:15,5,0
chr10	6814866	.	AT	A	199.99	PASS	AB=1.000;AC=20;AF=0.556;AN=36;BaseQRankSum=2.112;DP=97;FS=3.119;HRun=1;HaplotypeScore=34.1464;InbreedingCoeff=0.4798;MQ=40.27;MQ0=10;MQRankSum=-0.653;QD=3.64;ReadPosRankSum=0.253;VQSLOD=0.1368;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,4:5:12.04:160,12,0	1/1:1,0:1:1.25:3,1,0	0/0:6,0:1:0.47:0,0,1	./.	1/1:1,0:1:2.37:8,2,0	./.	./.	1/1:15,0:12:18.95:48,19,0	./.	1/1:2,0:2:2.49:6,2,0	1/1:4,0:4:8.67:26,9,0	1/1:3,0:3:3.85:11,4,0	1/1:3,0:3:5.32:15,5,0	./.	1/1:6,0:6:8.18:22,8,0	0/0:2,0:2:6.02:0,6,76	0/0:13,0:11:15.05:0,15,188	0/1:12,0:7:26.38:27,0,26	0/0:2,0:2:6.02:0,6,76	./.	./.	./.	./.	0/1:3,0:3:3.88:4,0,31	./.	0/0:3,0:3:8.23:0,8,36	0/0:7,0:6:10.97:0,11,48	0/0:4,0:3:5.49:0,5,24
chr10	6814883	.	TA	T	240.02	PASS	AB=0.909;AC=10;AF=0.455;AN=22;BaseQRankSum=3.110;DP=49;FS=0.000;HRun=1;HaplotypeScore=28.8973;InbreedingCoeff=0.3019;MQ=27.90;MQ0=9;MQRankSum=-3.215;QD=9.60;ReadPosRankSum=-0.896;VQSLOD=0.7090;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:3,0:3:0:1,0,0	./.	./.	./.	0/0:0,1:1:0:0,0,0	./.	./.	1/1:1,6:6:18.06:230,18,0	./.	./.	0/0:0,1:1:0:0,0,0	1/1:0,3:3:2.83:18,3,0	0/0:0,2:2:0:0,0,0	./.	0/0:0,1:1:0:0,0,0	./.	0/0:11,0:9:12.04:0,12,150	0/1:7,2:4:29.96:39,0,30	./.	./.	./.	./.	./.	./.	./.	1/1:1,0:1:2.99:24,3,0	1/1:2,0:2:4.07:11,4,0	./.
chr10	6814908	.	AT	A	699.54	PASS	AB=0.833;AC=16;AF=0.615;AN=26;BaseQRankSum=0.878;DP=68;FS=7.005;HRun=1;HaplotypeScore=20.8665;InbreedingCoeff=0.2652;MQ=24.44;MQ0=8;MQRankSum=-2.551;QD=17.94;ReadPosRankSum=-1.380;VQSLOD=2.9060;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	0/0:12,0:2:0:0,0,0	./.	./.	./.	1/1:3,4:4:12.04:153,12,0	./.	./.	./.	1/1:0,5:5:11.61:135,12,0	1/1:0,1:1:3.01:39,3,0	1/1:0,1:1:3.01:39,3,0	0/0:0,1:1:0:0,0,0	./.	0/0:4,0:4:3.01:0,3,36	0/1:7,7:9:19.05:191,0,19	./.	./.	0/1:1,0:1:0:0,0,0	./.	./.	0/0:0,1:1:0:0,0,0	./.	1/1:0,2:2:6.02:77,6,0	1/1:0,2:2:6.02:77,6,0	1/1:2,4:4:5.25:76,5,0
chr10	6814915	.	TA	T	1320.73	PASS	AB=0.714;AC=27;AF=0.900;AN=30;BaseQRankSum=-0.105;DP=91;FS=10.217;HRun=2;HaplotypeScore=21.4692;InbreedingCoeff=0.1181;MQ=30.53;MQ0=9;MQRankSum=-1.024;QD=21.65;ReadPosRankSum=0.439;VQSLOD=2.0508;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:3,0:3:1.25:0,1,3	./.	./.	./.	1/1:0,2:2:3.01:38,3,0	./.	./.	1/1:2,10:8:24.07:288,24,0	./.	./.	1/1:0,4:3:3.01:38,3,0	1/1:0,6:6:18.06:221,18,0	1/1:0,1:1:3.01:38,3,0	1/1:0,1:1:3.01:38,3,0	1/1:0,2:2:6.02:76,6,0	./.	0/1:3,2:5:4.43:4,0,6	1/1:7,7:9:5.53:208,6,0	./.	1/1:0,1:1:3.01:38,3,0	./.	./.	./.	1/1:0,1:1:3.01:38,3,0	./.	1/1:0,3:3:9.03:113,9,0	1/1:0,3:3:9.03:113,9,0	1/1:2,4:4:12.04:151,12,0
chr10	6814927	.	AT	A	57.55	PASS	AB=1.000;AC=7;AF=0.152;AN=46;BaseQRankSum=-1.789;DP=137;FS=4.972;HRun=2;HaplotypeScore=31.3119;InbreedingCoeff=0.3078;MQ=50.03;MQ0=10;MQRankSum=2.574;QD=4.43;ReadPosRankSum=-1.598;VQSLOD=0.0673;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:3,0:3:2.74:0,3,12	0/0:1,0:1:3.01:0,3,40	0/0:7,0:2:3.01:0,3,40	0/0:23,0:3:1.82:0,2,5	0/0:5,0:5:12.03:0,12,143	1/1:0,1:1:3.01:38,3,0	1/1:1,1:1:3.01:38,3,0	0/0:25,0:21:63.18:0,63,800	./.	0/0:3,0:3:5.95:0,6,57	0/0:5,0:4:6.02:0,6,77	0/0:8,0:8:24.08:0,24,297	0/0:1,0:1:3.01:0,3,36	0/0:3,0:3:9.03:0,9,115	0/0:2,0:2:6.02:0,6,76	./.	1/1:3,5:7:5.87:61,6,0	0/0:15,0:11:27.05:0,27,309	./.	0/1:2,0:2:30.91:31,0,31	./.	0/0:1,0:1:3.01:0,3,40	0/0:1,0:1:3.01:0,3,45	0/0:1,0:1:3.01:0,3,39	./.	0/0:3,0:3:9.03:0,9,106	0/0:5,0:5:14.52:0,15,143	0/0:12,0:10:30.10:0,30,403
chr10	6816351	.	C	CTG	15898.97	PASS	AB=0.743;AC=45;AF=0.804;AN=56;BaseQRankSum=-7.261;DP=957;FS=10.207;HRun=0;HaplotypeScore=132.2326;InbreedingCoeff=0.8138;MQ=44.97;MQ0=46;MQRankSum=4.857;QD=20.18;ReadPosRankSum=0.952;VQSLOD=4.8402;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:39,26:60:55.79:1351,56,0	1/1:7,9:16:38.86:606,39,0	0/0:41,0:11:8.13:0,8,104	0/0:40,0:12:15.27:0,15,133	1/1:8,9:17:27.01:379,27,0	1/1:15,10:23:33.10:512,33,0	1/1:7,27:34:7.63:655,8,0	1/1:34,11:40:31.76:914,32,0	1/1:4,27:28:18.06:297,18,0	1/1:22,8:29:57.07:797,57,0	1/1:11,10:18:30.08:464,30,0	1/1:22,23:40:57.17:897,57,0	1/1:14,14:26:4.61:530,5,0	1/1:14,13:27:24.04:315,24,0	1/1:26,29:51:57.18:899,57,0	1/1:20,22:39:48.02:762,48,0	1/1:12,18:27:22.66:836,23,0	0/1:17,9:25:23.83:636,0,24	1/1:16,14:21:42:575,42,0	1/1:8,13:21:54.17:850,54,0	1/1:65,34:91:34.69:1507,35,0	1/1:12,12:23:9.91:326,10,0	1/1:11,9:18:33.10:503,33,0	1/1:20,19:38:42.14:671,42,0	1/1:9,9:18:39.12:616,39,0	0/0:50,1:48:46.34:0,46,1192	0/0:23,0:22:39.10:0,39,463	0/0:13,0:13:30.04:0,30,356
chr10	6816389	.	ATG	A	9446.82	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-0.873;DP=918;FS=5.942;HRun=0;HaplotypeScore=173.2033;InbreedingCoeff=0.9762;MQ=46.97;MQ0=23;MQRankSum=-0.346;QD=17.79;ReadPosRankSum=0.660;VQSLOD=4.7827;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:61,0:60:99:0,126,2028	1/1:7,5:12:15.44:163,15,0	0/0:40,0:10:29.31:0,29,442	0/0:41,0:18:41.97:0,42,603	1/1:9,16:25:21.07:272,21,0	0/0:32,0:31:39.13:0,39,635	0/0:33,0:33:45.10:0,45,956	1/1:12,36:47:61.25:995,61,0	0/0:33,0:32:24.07:0,24,378	1/1:9,23:32:93.23:1146,93,0	1/1:5,12:17:24.08:311,24,0	1/1:13,20:33:38.80:500,39,0	1/1:7,13:20:26.52:300,27,0	1/1:8,15:22:21.07:271,21,0	1/1:20,31:50:53.76:632,54,0	0/0:41,0:40:70.76:0,71,1155	0/0:36,0:34:80.25:0,80,1250	1/1:9,13:22:56.31:666,56,0	0/0:27,0:25:63.31:0,63,1071	0/0:22,0:22:33.10:0,33,535	1/1:49,31:75:99:1209,102,0	1/1:10,17:27:26.97:336,27,0	1/1:6,14:19:12.04:152,12,0	1/1:19,22:41:54.03:667,54,0	0/0:20,0:20:30.09:0,30,471	1/1:20,29:45:99:1425,117,0	1/1:9,11:19:27.02:324,27,0	1/1:7,4:11:6.02:78,6,0
chr10	6816439	.	CTG	C	16295	PASS	AB=0.974;AC=53;AF=0.946;AN=56;BaseQRankSum=-2.979;DP=929;FS=0.000;HRun=0;HaplotypeScore=181.1753;InbreedingCoeff=0.6202;MQ=50.75;MQ0=24;MQRankSum=1.878;QD=17.99;ReadPosRankSum=2.678;VQSLOD=4.7332;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:33,28:60:99:1468,123,0	1/1:6,4:9:6.49:75,6,0	0/0:23,0:8:6.02:0,6,91	0/1:37,1:10:2.92:3,0,16	1/1:12,24:36:36.11:446,36,0	1/1:8,24:32:29.51:405,30,0	1/1:27,12:39:84.27:989,84,0	1/1:34,14:46:87.07:992,87,0	1/1:0,31:32:36.11:450,36,0	1/1:24,17:41:73.84:951,74,0	1/1:13,7:20:12.02:137,12,0	1/1:20,20:40:83.99:986,84,0	1/1:15,15:30:59.82:700,60,0	1/1:14,15:28:39.09:465,39,0	1/1:16,27:43:65.13:763,65,0	1/1:18,15:33:83.07:1013,83,0	1/1:7,35:42:45.65:729,46,0	1/1:19,5:22:35.91:478,36,0	1/1:10,6:12:33.08:393,33,0	1/1:6,20:26:21.07:263,21,0	1/1:44,37:77:98.05:1202,98,0	1/1:12,12:24:30.08:361,30,0	1/1:12,8:19:8.89:112,9,0	1/1:28,24:52:80.94:992,81,0	1/1:3,19:22:18:225,18,0	1/1:27,18:44:92.50:1125,93,0	1/1:5,9:14:36.04:415,36,0	1/1:7,0:7:17.91:157,18,0
chr10	6816488	.	C	CGT	14451.90	PASS	AB=0.973;AC=35;AF=0.625;AN=56;BaseQRankSum=-3.454;DP=972;FS=10.410;HRun=0;HaplotypeScore=209.0677;InbreedingCoeff=0.8809;MQ=62.27;MQ0=10;MQRankSum=-0.558;QD=23.31;ReadPosRankSum=3.679;VQSLOD=4.6609;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:69,2:70:99:686,0,118	1/1:1,10:11:18.06:300,18,0	0/0:45,0:25:28.37:0,28,253	0/0:57,0:34:26.20:0,26,267	1/1:18,12:29:26.77:316,27,0	0/0:27,0:27:54.05:0,54,592	0/0:41,0:41:59.07:0,59,1057	1/1:36,6:42:55.54:812,56,0	0/0:22,0:22:42.05:0,42,466	1/1:12,21:32:58.82:927,59,0	1/1:5,17:22:3.93:441,4,0	1/1:13,36:49:74.56:1515,75,0	1/1:10,23:33:72.19:1099,72,0	1/1:9,19:27:26.11:857,26,0	1/1:10,37:48:54.24:1527,54,0	0/0:38,0:38:96.20:0,96,1110	0/0:37,0:37:72.10:0,72,790	1/1:8,9:17:30.01:440,30,0	0/0:31,0:28:29.21:0,29,641	0/0:30,0:30:42.01:0,42,447	1/1:30,37:67:99:1446,99,0	1/1:12,17:29:15.03:250,15,0	1/1:4,13:17:18.06:300,18,0	1/1:15,27:42:59.70:1007,60,0	0/0:20,0:20:9.01:0,9,100	1/1:16,22:38:66.75:1087,67,0	1/1:5,13:18:9.49:580,9,0	1/1:2,20:24:53.85:861,54,0
chr10	6816498	.	T	TGA	7312.42	PASS	AB=0.965;AC=22;AF=0.393;AN=56;BaseQRankSum=10.063;DP=969;FS=10.552;HRun=0;HaplotypeScore=221.6265;InbreedingCoeff=-0.0819;MQ=62.29;MQ0=12;MQRankSum=-2.855;QD=11.87;ReadPosRankSum=10.087;VQSLOD=2.8359;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:15,50:65:49.62:1394,0,50	1/1:10,0:10:18.02:177,18,0	0/0:48,0:20:14.64:0,15,212	0/0:60,0:37:2.50:0,2,285	0/1:32,0:31:74.99:89,0,75	0/0:29,0:30:26.01:0,26,512	0/0:39,0:40:86.91:0,87,965	0/1:41,0:41:93.19:169,0,93	0/0:20,0:20:33.07:0,33,378	0/1:33,0:32:99:346,0,126	0/1:24,0:25:40.72:215,0,41	0/1:50,0:50:37.09:675,0,37	1/1:30,0:30:40.18:507,40,0	0/1:32,0:31:65.63:413,0,66	0/1:54,0:54:99:676,0,100	0/0:40,0:40:71.29:0,71,1050	0/0:34,0:35:48.09:0,48,546	0/1:18,0:18:52.30:173,0,52	0/0:30,0:27:63.11:0,63,683	0/0:31,0:31:36.01:0,36,394	0/1:57,1:58:67.30:601,0,67	1/1:26,0:25:15.01:154,15,0	0/1:19,0:19:42.26:149,0,42	0/1:45,0:45:61.96:408,0,62	0/0:18,0:18:9.01:0,9,98	0/1:33,0:33:71.16:393,0,71	0/1:21,0:21:60.82:290,0,61	1/1:23,0:23:44.86:482,45,0
chr10	6817450	.	CGAGAGAGAGA	C	1434.20	PASS	AB=0.949;AC=10;AF=0.179;AN=56;BaseQRankSum=-2.882;DP=692;FS=3.191;HRun=0;HaplotypeScore=213.1553;InbreedingCoeff=0.1933;MQ=50.90;MQ0=18;MQRankSum=1.660;QD=10.47;ReadPosRankSum=-0.941;VQSLOD=2.6412;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:24:3.01:48,3,0	0/0:16,0:15:18.11:0,18,441	0/0:35,0:4:3.01:0,3,59	0/0:56,0:17:25.66:0,26,328	0/0:24,0:24:30.10:0,30,699	0/1:18,0:18:99:285,0,712	1/1:15,0:15:19.60:330,20,0	0/0:45,0:45:93.15:0,93,1225	0/1:12,0:12:5.35:5,0,292	0/0:27,0:27:71.92:0,72,1876	0/0:17,0:17:21.02:0,21,335	0/0:24,0:23:33.07:0,33,800	0/0:29,0:29:43.09:0,43,800	0/0:26,0:25:26.94:0,27,727	0/0:46,0:46:50.65:0,51,1042	0/0:19,0:19:13.69:0,14,536	0/1:26,0:26:99:137,0,471	0/0:23,0:23:40.37:0,40,1109	0/1:10,8:17:66.23:425,0,66	0/1:15,0:15:99:172,0,511	0/0:27,0:26:18.06:0,18,325	0/0:23,0:23:23.49:0,23,636	0/0:20,0:19:18.05:0,18,365	0/0:23,0:23:27.07:0,27,544	0/1:8,0:8:99:177,0,227	0/0:22,0:21:56.55:0,57,1776	0/0:28,0:33:76.79:0,77,2403	0/0:19,0:18:46.79:0,47,1057
chr10	6817454	.	A	AGC	3420.45	PASS	AB=0.865;AC=20;AF=0.357;AN=56;BaseQRankSum=-2.654;DP=693;FS=1.845;HRun=0;HaplotypeScore=136.7453;InbreedingCoeff=0.0125;MQ=52.25;MQ0=15;MQRankSum=5.331;QD=10.12;ReadPosRankSum=1.937;VQSLOD=3.4992;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,19:20:3.01:50,3,0	0/1:16,0:15:80.20:144,0,80	0/0:34,0:5:2.68:0,3,38	0/0:56,0:19:26.85:0,27,238	0/1:24,0:24:33.96:34,0,209	0/1:9,10:19:13.90:511,0,14	0/1:3,13:17:9.89:285,0,10	0/0:44,0:44:70.20:0,70,619	0/1:1,10:11:11.93:257,0,12	0/1:29,0:29:99:131,0,319	0/1:17,0:17:99:149,0,108	0/0:24,0:23:15.22:0,15,311	0/0:27,0:27:10.25:0,10,180	0/0:28,0:27:35.97:0,36,357	0/1:48,0:48:99:217,0,199	1/1:2,18:20:9.08:367,9,0	1/1:2,25:27:13.11:402,13,0	0/1:22,0:22:99:113,0,208	0/1:18,0:16:4.66:5,0,192	0/1:7,6:13:31.91:316,0,32	0/1:26,1:26:99:121,0,129	0/0:22,0:22:35.75:0,36,347	0/0:17,0:16:15.09:0,15,149	0/0:24,0:24:32.62:0,33,334	1/1:0,8:9:18.06:319,18,0	0/0:23,0:22:60.46:0,60,642	0/0:34,0:34:69.92:0,70,974	0/0:22,0:21:6.95:0,7,536
chr10	6818017	.	A	AGG	130.35	PASS	AB=0.953;AC=9;AF=0.161;AN=56;BaseQRankSum=3.791;DP=486;FS=54.239;HRun=0;HaplotypeScore=60.1784;InbreedingCoeff=0.0003;MQ=44.19;MQ0=67;MQRankSum=-4.256;QD=1.39;ReadPosRankSum=4.221;VQSLOD=-0.7572;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:20:44.73:0,45,563	0/1:10,1:8:49.29:49,0,99	0/0:51,0:8:12.16:0,12,137	0/0:70,0:11:22.06:0,22,178	0/1:10,0:9:14.83:15,0,162	0/0:11,0:10:27.07:0,27,332	0/0:18,0:13:29.86:0,30,326	0/0:15,0:14:24.98:0,25,429	0/0:11,0:9:24.02:0,24,243	0/0:13,0:11:24.05:0,24,299	0/1:17,1:18:10.19:10,0,461	0/0:12,0:10:14.82:0,15,142	0/1:7,0:6:17.66:18,0,77	1/1:3,1:2:5.38:38,5,0	0/0:19,0:16:32.88:0,33,358	0/0:17,0:15:36.11:0,36,455	0/0:21,0:15:39.10:0,39,489	0/0:21,0:17:7.58:0,8,308	0/0:14,0:14:42.02:0,42,485	0/0:17,0:16:45.12:0,45,567	0/0:9,0:8:16.29:0,16,194	0/0:7,0:6:12:0,12,135	0/1:11,2:11:20.11:20,0,194	0/0:13,0:12:3.63:0,4,132	0/0:11,0:9:21.05:0,21,244	0/1:16,0:12:69.67:70,0,187	0/1:14,0:13:47.79:48,0,239	0/0:16,0:11:15.03:0,15,187
chr10	6818018	.	A	AGG	259.10	PASS	AB=0.889;AC=8;AF=0.143;AN=56;BaseQRankSum=2.325;DP=483;FS=68.306;HRun=0;HaplotypeScore=55.9159;InbreedingCoeff=-0.0077;MQ=45.85;MQ0=67;MQRankSum=-3.626;QD=3.50;ReadPosRankSum=3.015;VQSLOD=-0.6341;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:20:44.30:0,44,546	0/1:11,0:8:14.02:14,0,90	0/0:51,0:8:3.04:0,3,139	0/0:71,0:12:5.42:0,5,145	0/1:8,2:9:53.40:53,0,177	0/0:11,0:10:27.07:0,27,321	0/0:18,0:13:29.65:0,30,312	0/0:15,1:15:3.08:0,3,430	0/0:12,0:10:23.99:0,24,241	0/0:13,0:11:27.03:0,27,316	0/0:18,0:18:0.46:0,0,454	0/0:12,0:10:8.45:0,8,101	0/1:3,1:5:36.65:37,0,69	1/1:4,0:2:5.81:34,6,0	0/0:17,0:14:31.26:0,31,349	0/0:17,0:15:36.08:0,36,437	0/0:20,0:14:36.09:0,36,453	0/0:20,0:16:20.76:0,21,304	0/0:15,0:15:41.97:0,42,456	0/0:17,0:16:45.10:0,45,555	0/0:9,0:8:19.27:0,19,220	0/0:7,0:6:11.98:0,12,126	0/1:13,0:11:32.24:32,0,159	0/0:13,0:12:5.14:0,5,130	0/0:11,0:9:21.01:0,21,227	0/1:15,0:11:98.64:99,0,178	0/1:12,3:13:99:122,0,212	0/0:15,0:10:15.02:0,15,182
chr10	6818112	.	CTCATCCCT	C	15064.24	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=2.275;DP=349;FS=6.314;HRun=0;HaplotypeScore=95.8912;InbreedingCoeff=0.6875;MQ=75.97;MQ0=0;MQRankSum=-7.691;QD=46.49;ReadPosRankSum=5.658;VQSLOD=3.6055;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,13:18:27.09:730,27,0	1/1:2,0:2:3.01:38,3,0	0/0:14,0:14:37.01:0,37,1369	0/0:11,0:10:27.09:0,27,1077	1/1:1,7:6:6.02:162,6,0	1/1:1,16:17:30.10:812,30,0	1/1:3,14:16:27.03:731,27,0	1/1:1,13:14:38.97:716,39,0	1/1:1,8:9:18.06:488,18,0	1/1:3,8:10:27:597,27,0	1/1:3,6:9:15.05:406,15,0	1/1:1,11:12:26.60:731,27,0	1/1:2,6:8:15.05:406,15,0	1/1:0,13:12:27.09:731,27,0	1/1:0,14:14:36.07:913,36,0	1/1:0,15:14:39.13:1056,39,0	1/1:2,13:15:21.54:570,22,0	1/1:1,11:11:9.03:244,9,0	1/1:3,12:15:36.05:659,36,0	1/1:4,15:19:45.15:1219,45,0	1/1:6,14:20:24.08:650,24,0	1/1:0,6:6:15.05:406,15,0	1/1:1,6:7:8.92:237,9,0	1/1:5,12:17:3.01:82,3,0	1/1:0,10:10:21.07:569,21,0	1/1:3,15:18:45.13:1098,45,0	1/1:1,14:15:27.09:732,27,0	1/1:1,1:2:3.01:81,3,0
chr10	6818443	.	A	AT	759.81	PASS	AB=0.580;AC=4;AF=0.071;AN=56;BaseQRankSum=-2.573;DP=404;FS=0.000;HRun=9;HaplotypeScore=59.6538;InbreedingCoeff=0.4721;MQ=60.57;MQ0=1;MQRankSum=2.449;QD=22.35;ReadPosRankSum=-0.414;VQSLOD=4.0741;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,108,929	0/0:6,0:5:17.98:0,18,153	0/0:15,0:8:7.32:0,7,114	0/0:12,0:10:23.07:0,23,173	0/0:16,0:16:38.86:0,39,319	0/0:24,0:24:65.96:0,66,570	0/0:15,0:16:41.01:0,41,341	0/0:13,0:13:29.98:0,30,258	0/0:10,0:10:29.99:0,30,260	0/0:11,0:11:26.93:0,27,226	0/0:13,0:13:38.73:0,39,303	0/0:5,0:5:12:0,12,104	0/0:10,0:10:23.92:0,24,199	0/0:13,0:13:35.83:0,36,295	0/0:13,0:13:34.86:0,35,275	0/0:23,0:23:62.98:0,63,547	0/0:26,0:26:65.96:0,66,568	0/0:11,0:11:29.99:0,30,260	0/0:24,0:24:59.96:0,60,514	0/0:23,0:23:62.93:0,63,540	0/0:7,0:7:17.95:0,18,149	0/0:9,0:9:26.90:0,27,222	0/0:9,0:9:26.84:0,27,214	0/0:9,0:9:20.92:0,21,173	0/0:14,0:14:32.86:0,33,271	0/1:3,11:14:16.02:287,0,16	1/1:0,17:17:48.13:531,48,0	0/1:1,2:3:9.20:57,0,9
chr10	6818729	.	GCCATCT	G	19223.02	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=14.641;DP=639;FS=0.000;HRun=0;HaplotypeScore=156.8804;InbreedingCoeff=0.9737;MQ=78.93;MQ0=0;MQRankSum=-19.193;QD=58.08;ReadPosRankSum=-0.490;VQSLOD=4.4796;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,157,5470	1/1:0,3:3:9.03:216,9,0	0/0:20,0:20:57.20:0,57,1910	0/0:23,0:23:60.20:0,60,1839	1/1:0,10:10:27.09:543,27,0	0/0:23,0:23:69.24:0,69,2386	0/0:32,0:32:96.26:0,96,3078	1/1:3,27:30:78.27:1831,78,0	0/0:35,0:35:99:0,105,3594	1/1:3,13:16:36.11:811,36,0	1/1:0,5:6:18.06:430,18,0	1/1:1,31:32:84.29:2005,84,0	1/1:2,20:22:60.21:1427,60,0	1/1:1,32:33:90.31:2162,90,0	1/1:0,38:38:99:2345,102,0	0/0:31,0:31:90.31:0,90,3183	0/0:32,0:32:96.31:0,96,3268	1/1:3,3:6:9.03:197,9,0	0/0:26,0:26:75.23:0,75,2543	0/0:19,0:19:57.20:0,57,2012	1/1:4,19:23:36.59:862,37,0	1/1:0,16:16:42.14:972,42,0	1/1:0,4:4:9.03:196,9,0	1/1:2,23:25:45.15:971,45,0	0/0:13,0:12:30.10:0,30,1073	1/1:0,27:27:81.25:1894,81,0	1/1:1,26:27:69.24:1638,69,0	1/1:3,10:13:30.10:721,30,0
chr10	6819063	.	A	ATT	6916.65	PASS	AB=0.746;AC=51;AF=0.911;AN=56;BaseQRankSum=0.241;DP=454;FS=5.579;HRun=11;HaplotypeScore=127.1368;InbreedingCoeff=0.4110;MQ=61.05;MQ0=3;MQRankSum=-2.318;QD=15.51;ReadPosRankSum=-0.908;VQSLOD=3.0947;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:34:57.66:299,58,0	1/1:5,6:8:17.80:255,18,0	0/1:7,0:7:0:0,0,0	0/0:8,0:7:4.77:0,5,34	1/1:11,11:23:42.03:512,42,0	1/1:9,1:20:10.87:183,11,0	1/1:6,0:16:7.59:99,8,0	1/1:9,8:17:33.02:401,33,0	0/1:2,0:14:1.24:58,0,1	1/1:15,7:22:46.71:526,47,0	1/1:8,6:15:31.50:295,31,0	1/1:7,3:9:12.04:174,12,0	1/1:6,12:16:37.06:520,37,0	1/1:4,5:9:15.05:215,15,0	1/1:6,10:15:33.06:433,33,0	1/1:7,0:18:25.94:118,26,0	1/1:5,0:24:47.92:183,48,0	1/1:3,9:15:31.35:342,31,0	0/1:7,0:12:13.50:29,0,14	1/1:7,0:17:34.60:173,35,0	1/1:6,10:17:29.07:359,29,0	1/1:3,8:13:29.57:367,30,0	1/1:4,6:14:22.53:215,23,0	1/1:3,7:11:21.06:274,21,0	1/1:7,0:12:19.92:108,20,0	1/1:9,2:19:39.07:405,39,0	1/1:7,2:19:29:266,29,0	1/1:6,0:6:12:108,12,0
chr10	6819074	.	T	TCC	1525.64	PASS	AB=0.925;AC=14;AF=0.259;AN=54;BaseQRankSum=-1.679;DP=497;FS=6.117;HRun=1;HaplotypeScore=158.8363;InbreedingCoeff=-0.2533;MQ=41.18;MQ0=5;MQRankSum=-6.651;QD=6.52;ReadPosRankSum=-2.111;VQSLOD=-0.7240;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:34:68.67:0,69,643	0/1:14,0:11:27.36:79,0,27	./.	0/0:3,0:2:0.08:0,0,41	0/1:23,6:26:99:241,0,118	0/0:22,0:21:43.40:0,43,410	0/0:18,0:17:33.83:0,34,310	0/1:15,0:14:44.97:45,0,194	0/0:20,0:18:38.38:0,38,376	0/1:23,9:30:83.70:423,0,84	0/1:14,4:15:82.48:116,0,82	0/1:11,0:10:40.89:100,0,41	0/1:16,2:15:10.57:11,0,90	0/1:13,0:11:63.14:74,0,63	1/1:14,1:14:0.55:96,1,0	0/0:19,0:18:32.74:0,33,280	0/0:25,0:25:58.38:0,58,525	0/1:18,1:19:99:104,0,127	0/0:15,0:13:14.96:0,15,207	0/0:19,0:19:12.27:0,12,297	0/0:16,0:13:18.64:0,19,111	0/1:16,2:15:99:155,0,110	0/1:18,1:19:64.66:206,0,65	0/1:12,0:11:16.81:25,0,17	0/0:16,0:15:17.74:0,18,195	0/0:22,0:22:29.20:0,29,286	0/0:23,0:23:39.38:0,39,303	0/0:9,0:6:6.72:0,7,89
chr10	6819145	.	G	GC	655.93	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=-1.739;DP=593;FS=3.956;HRun=7;HaplotypeScore=132.4335;InbreedingCoeff=0.6689;MQ=49.45;MQ0=11;MQRankSum=0.484;QD=14.91;ReadPosRankSum=-2.060;VQSLOD=2.2896;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:11,22:33:34.88:750,35,0	0/0:11,0:8:15.02:0,15,145	0/1:11,0:9:3.25:3,0,152	0/0:12,0:7:6.98:0,7,134	0/0:35,0:33:62.44:0,62,425	0/0:17,0:17:42.17:0,42,365	0/0:26,0:23:53.15:0,53,447	0/0:18,0:18:35.25:0,35,235	0/0:15,0:13:30.25:0,30,210	0/0:34,0:34:72.41:0,72,575	0/0:21,0:19:43.49:0,43,300	0/0:18,0:17:46.14:0,46,417	0/0:18,0:16:38.83:0,39,307	0/0:21,0:19:40.13:0,40,359	0/0:11,0:10:21.13:0,21,163	0/0:15,0:14:36.11:0,36,297	0/0:32,0:32:74.35:0,74,621	0/0:16,0:16:40.09:0,40,350	0/0:20,0:15:28.57:0,29,247	0/0:22,0:22:50.21:0,50,369	0/0:12,0:10:25.11:0,25,214	0/0:30,0:27:63.36:0,63,478	0/0:26,0:26:62.19:0,62,535	0/0:25,0:24:58.11:0,58,523	0/0:27,0:25:55.05:0,55,448	0/0:31,0:31:76.38:0,76,622	0/0:28,0:27:70.86:0,71,563	0/0:8,0:8:16.09:0,16,128
chr10	6819732	.	AT	A	1445.87	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=3.461;DP=630;FS=6.833;HRun=8;HaplotypeScore=112.0736;InbreedingCoeff=0.9945;MQ=76.35;MQ0=1;MQRankSum=-4.666;QD=22.95;ReadPosRankSum=1.230;VQSLOD=3.1703;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:46.92:0,47,536	0/0:10,0:10:24.07:0,24,290	0/0:28,0:22:47.22:0,47,514	0/0:24,0:19:40.57:0,41,447	0/0:34,0:34:90.25:0,90,1065	0/0:21,0:21:54.15:0,54,642	0/0:16,1:17:16.16:0,16,478	0/0:28,0:28:81.24:0,81,967	0/0:24,0:24:60.18:0,60,724	0/0:30,0:30:90.27:0,90,1078	0/0:21,0:21:54.15:0,54,639	0/0:25,0:25:63.18:0,63,750	0/0:17,0:17:45.14:0,45,543	0/0:15,0:15:45.14:0,45,544	0/0:26,0:26:75.22:0,75,894	0/0:31,0:31:75.21:0,75,896	0/0:26,1:27:34.21:0,34,681	0/0:20,0:20:57.13:0,57,672	0/0:19,0:19:57.17:0,57,679	0/0:34,0:34:96.28:0,96,1148	0/0:11,0:11:30.09:0,30,362	0/0:25,0:25:72.22:0,72,870	0/0:13,1:14:36.07:0,36,418	0/0:25,0:25:66.20:0,66,797	0/0:19,0:19:51.16:0,51,615	1/1:4,22:26:66.10:637,66,0	1/1:3,18:21:60.08:575,60,0	1/1:0,16:16:39.06:376,39,0
chr10	6819758	.	G	GT	5354.08	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-3.265;DP=672;FS=2.909;HRun=0;HaplotypeScore=133.3761;InbreedingCoeff=0.9807;MQ=67.16;MQ0=5;MQRankSum=3.927;QD=26.51;ReadPosRankSum=3.144;VQSLOD=5.1383;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:19.47:0,19,160	0/0:15,0:15:39.13:0,39,543	0/0:43,0:21:61.99:0,62,726	0/0:33,0:16:33.80:0,34,396	0/0:29,0:29:81.26:0,81,1110	1/1:1,24:26:67.89:785,68,0	1/1:2,18:20:43.92:526,44,0	0/0:29,0:28:78.26:0,78,1074	1/1:2,19:21:50.90:559,51,0	0/0:32,0:32:96.31:0,96,1305	0/0:23,0:23:66.22:0,66,918	0/0:23,0:23:63.21:0,63,879	0/0:16,0:16:45.13:0,45,599	0/0:16,0:16:48.15:0,48,654	0/0:29,0:29:87.29:0,87,1215	1/1:5,25:31:61.71:698,62,0	1/1:4,21:25:54.78:640,55,0	0/0:22,0:22:66.22:0,66,920	1/1:3,16:19:5.85:459,6,0	1/1:1,37:38:97.35:1107,97,0	0/0:14,0:14:36.12:0,36,503	0/0:23,0:23:63.21:0,63,870	0/0:17,0:17:46.04:0,46,630	0/0:27,0:27:68.24:0,68,893	1/1:2,20:22:51.14:580,51,0	0/0:23,0:22:63.21:0,63,867	0/0:24,0:23:69.19:0,69,941	0/0:12,0:12:36.12:0,36,503
chr10	6819759	.	G	GT	6191.10	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-4.406;DP=676;FS=1.913;HRun=7;HaplotypeScore=133.2550;InbreedingCoeff=0.9906;MQ=66.96;MQ0=5;MQRankSum=1.676;QD=27.76;ReadPosRankSum=0.466;VQSLOD=3.0930;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,17:20:48.75:536,49,0	0/0:15,0:15:36.01:0,36,337	0/0:43,0:20:9.28:0,9,202	0/0:33,0:15:20.60:0,21,149	0/0:29,0:29:72.11:0,72,694	1/1:25,0:25:69.08:807,69,0	1/1:20,0:20:48.13:564,48,0	0/0:30,0:29:60.08:0,60,573	1/1:20,1:21:51.16:613,51,0	0/0:32,0:32:87.07:0,87,824	0/0:23,0:23:57.09:0,57,549	0/0:23,0:23:54.08:0,54,520	0/0:16,0:16:33.02:0,33,310	0/0:16,0:16:47.55:0,48,437	0/0:29,0:29:78.11:0,78,747	1/1:31,0:31:63.53:736,64,0	1/1:26,0:26:54.17:647,54,0	0/0:23,0:23:63.10:0,63,608	1/1:18,0:19:49.95:522,50,0	1/1:38,0:38:99:1152,103,0	0/0:15,0:15:36.03:0,36,336	0/0:24,0:24:56.92:0,57,539	0/0:17,0:17:42.94:0,43,400	0/0:26,0:26:65.10:0,65,600	1/1:23,0:23:51.63:614,52,0	0/0:23,0:22:60.10:0,60,577	0/0:24,0:23:69.03:0,69,651	0/0:12,0:12:36.06:0,36,347
chr10	6819770	.	TTTTG	T	9319.88	PASS	AB=0.881;AC=37;AF=0.661;AN=56;BaseQRankSum=-8.274;DP=642;FS=1.358;HRun=0;HaplotypeScore=152.8311;InbreedingCoeff=0.8065;MQ=60.10;MQ0=4;MQRankSum=-0.973;QD=21.04;ReadPosRankSum=0.677;VQSLOD=4.5355;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:15,8:23:13.02:326,13,0	1/1:3,11:14:24.08:386,24,0	0/1:32,0:11:0:0,0,0	0/0:28,0:9:9.03:0,9,168	1/1:11,17:28:50.97:678,51,0	0/0:25,0:25:48.16:0,48,1096	0/0:23,0:23:42.14:0,42,944	1/1:17,8:23:18.03:241,18,0	0/0:21,0:21:6.36:0,6,691	1/1:12,19:31:57.09:786,57,0	1/1:4,19:23:42.06:604,42,0	1/1:5,17:22:39.13:627,39,0	1/1:2,10:13:26.58:413,27,0	1/1:3,12:16:33.11:510,33,0	1/1:9,18:27:48.16:771,48,0	0/0:25,0:25:45.14:0,45,1000	0/0:22,0:22:30.10:0,30,708	0/1:12,10:22:9.44:470,0,9	0/0:18,0:18:30.10:0,30,676	0/0:37,0:37:75.26:0,75,1664	1/1:5,9:14:21.07:337,21,0	1/1:10,12:22:26.94:347,27,0	1/1:4,13:17:28.72:451,29,0	1/1:9,17:26:38.16:584,38,0	0/1:20,1:21:6.01:6,0,895	1/1:14,11:25:52.46:798,52,0	1/1:11,15:25:45.03:694,45,0	1/1:10,4:14:21.05:291,21,0
chr10	6820453	.	A	AACACACAC	6829.48	PASS	AC=50;AF=0.962;AN=52;BaseQRankSum=-3.549;DP=515;FS=0.000;HRun=0;HaplotypeScore=171.8094;InbreedingCoeff=0.1063;MQ=58.61;MQ0=8;MQRankSum=-0.324;QD=15.11;ReadPosRankSum=3.343;VQSLOD=3.5971;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,0:28:1.81:106,2,0	0/0:5,0:5:0.89:0,1,2	./.	./.	1/1:16,0:15:6.02:164,6,0	1/1:17,0:19:3.01:104,3,0	1/1:27,0:28:15.05:385,15,0	1/1:29,0:28:19.30:475,19,0	1/1:14,0:14:5.02:92,5,0	1/1:9,2:12:12.04:428,12,0	1/1:14,0:14:5.95:222,6,0	1/1:19,0:19:15.43:409,15,0	1/1:15,0:15:7.58:216,8,0	1/1:15,0:15:2.75:69,3,0	1/1:23,8:31:20.34:777,20,0	1/1:14,0:16:6.02:213,6,0	1/1:16,0:16:9.03:318,9,0	1/1:14,3:18:18.04:488,18,0	1/1:9,0:9:9.03:305,9,0	1/1:19,0:18:6.02:197,6,0	1/1:21,0:20:11.69:122,12,0	1/1:12,0:13:3.01:104,3,0	1/1:19,0:21:1.76:5,2,0	1/1:14,2:18:6.02:147,6,0	1/1:14,0:16:3.73:205,4,0	1/1:15,0:15:18.06:578,18,0	1/1:16,0:15:15.05:486,15,0	1/1:12,0:12:6.02:215,6,0
chr10	6820786	.	G	GTAAGAAAACTAC	46729.31	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-5.208;DP=642;FS=3.049;HRun=0;HaplotypeScore=183.7873;InbreedingCoeff=0.9924;MQ=70.41;MQ0=0;MQRankSum=-17.628;QD=126.98;ReadPosRankSum=-0.293;VQSLOD=4.9218;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:87.30:0,87,3133	1/1:2,5:7:12.04:709,12,0	0/0:16,0:16:39.13:0,39,1248	0/0:16,0:16:43.65:0,44,1115	1/1:12,6:22:45.15:1724,45,0	0/0:25,0:25:75.24:0,75,2689	0/0:27,0:27:81.28:0,81,2938	1/1:30,12:43:99:6256,126,0	0/0:25,0:25:72.25:0,72,2704	1/1:16,13:30:84.29:4450,84,0	1/1:5,12:19:45.15:2413,45,0	1/1:13,11:28:66.23:3621,66,0	1/1:11,9:24:63.22:3292,63,0	1/1:5,16:24:60.21:3495,60,0	1/1:9,17:29:78.27:4135,78,0	0/0:28,0:28:81.28:0,81,2835	0/0:35,0:35:93.32:0,93,3465	1/1:7,4:12:27.09:1331,27,0	0/0:23,0:23:69.22:0,69,2229	0/0:33,0:31:75.24:0,75,2479	1/1:6,1:10:15.05:594,15,0	1/1:4,4:12:24.08:1154,24,0	1/1:3,7:12:24.08:1323,24,0	1/1:6,7:15:27.09:1468,27,0	0/0:15,0:15:45.14:0,45,1530	1/1:10,14:28:81.26:3822,81,0	1/1:12,22:38:90.31:5205,90,0	1/1:3,7:12:30.10:1737,30,0
chr10	6821104	.	CTTCTCTCTCTCT	C	3068.74	PASS	AB=0.875;AC=26;AF=0.481;AN=54;BaseQRankSum=2.489;DP=554;FS=3.328;HRun=0;HaplotypeScore=172.6860;InbreedingCoeff=0.6511;MQ=66.18;MQ0=21;MQRankSum=-1.366;QD=11.85;ReadPosRankSum=-0.964;VQSLOD=2.4813;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:42.20:0,42,552	1/1:0,1:8:11.29:61,11,0	0/0:36,0:22:34.46:0,34,501	0/0:51,0:19:34.55:0,35,582	1/1:0,22:24:5.90:40,6,0	0/0:24,0:23:59.99:0,60,1328	0/0:18,0:18:45.46:0,45,1179	1/1:28,0:26:73.72:793,74,0	0/0:22,0:22:44.95:0,45,837	1/1:1,16:18:47.32:564,47,0	./.	0/1:0,0:14:0:0,0,0	1/1:0,1:11:5.49:187,5,0	1/1:19,1:24:40.23:387,40,0	1/1:0,24:27:8.04:61,8,0	0/0:29,0:27:45.05:0,45,762	0/0:14,0:14:27:0,27,663	1/1:1,10:12:12.04:394,12,0	0/0:20,0:20:60.02:0,60,1805	0/0:18,0:17:41.86:0,42,1013	0/0:1,0:16:0.47:0,0,1	1/1:11,1:14:11.86:106,12,0	1/1:0,1:13:5.92:39,6,0	1/1:11,0:16:11.11:100,11,0	0/0:15,0:15:39.02:0,39,726	0/1:17,0:16:99:264,0,416	0/1:19,0:18:99:146,0,615	0/1:12,0:11:72.88:124,0,73
chr10	6821146	.	T	TCACACA	7526.39	PASS	AB=1.000;AC=52;AF=0.929;AN=56;BaseQRankSum=-0.345;DP=639;FS=8.278;HRun=0;HaplotypeScore=172.3352;InbreedingCoeff=0.2139;MQ=41.62;MQ0=18;MQRankSum=-1.606;QD=12.12;ReadPosRankSum=3.287;VQSLOD=3.5502;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:27:19.06:241,19,0	1/1:9,0:8:8.77:149,9,0	0/1:32,0:4:16.41:16,0,96	0/1:43,0:10:1.08:1,0,171	1/1:26,0:25:17.74:420,18,0	1/1:19,0:19:18.05:338,18,0	1/1:20,0:20:18.06:444,18,0	1/1:41,0:41:71.93:977,72,0	1/1:10,1:27:6.87:52,7,0	1/1:25,0:25:42.52:789,43,0	1/1:16,0:16:8.99:167,9,0	1/1:11,0:9:5.28:128,5,0	1/1:21,0:21:20.84:402,21,0	1/1:20,0:17:8.77:157,9,0	1/1:30,0:30:29.57:620,30,0	1/1:10,7:34:3.15:91,3,0	1/1:5,6:16:8.98:152,9,0	1/1:17,0:17:29.85:453,30,0	1/1:23,1:23:33.44:530,33,0	1/1:5,1:22:2.72:38,3,0	1/1:23,0:23:5.56:123,6,0	1/1:20,0:19:6.01:90,6,0	1/1:26,0:24:11.65:267,12,0	1/1:9,0:17:4.19:21,4,0	0/0:6,9:18:2.22:0,2,7	1/1:9,0:19:38.91:642,39,0	1/1:7,0:20:9.03:189,9,0	1/1:9,0:9:4.25:30,4,0
chr10	6821632	.	T	TA	13333.87	PASS	AB=0.592;AC=48;AF=0.857;AN=56;BaseQRankSum=-6.828;DP=402;FS=39.495;HRun=1;HaplotypeScore=79.7357;InbreedingCoeff=-0.1665;MQ=64.48;MQ0=1;MQRankSum=1.310;QD=33.17;ReadPosRankSum=5.307;VQSLOD=2.4131;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,14:19:43.84:682,44,0	1/1:1,7:8:21.07:314,21,0	1/1:9,1:6:3.11:92,3,0	0/1:15,2:13:36.11:36,0,77	1/1:0,13:13:39.06:548,39,0	1/1:2,15:17:4.39:535,4,0	0/1:1,12:13:4.80:410,0,5	0/1:5,15:20:29.86:633,0,30	1/1:1,18:19:16.27:723,16,0	1/1:0,12:12:36.10:510,36,0	0/1:1,11:12:2.33:457,0,2	0/1:1,7:8:17.57:247,0,18	1/1:0,14:14:36.12:538,36,0	0/1:2,4:6:23.53:163,0,24	1/1:2,14:16:3.61:544,4,0	1/1:1,15:16:17.35:601,17,0	1/1:2,13:15:19.84:510,20,0	0/1:2,10:11:44.28:371,0,44	1/1:4,17:21:19.28:706,19,0	1/1:2,20:22:20.74:756,21,0	1/1:1,10:11:30.06:424,30,0	1/1:2,17:19:48.08:690,48,0	1/1:1,11:12:33.11:493,33,0	1/1:0,14:13:30.06:403,30,0	0/1:3,14:17:2.62:497,0,3	1/1:0,16:16:48.14:691,48,0	1/1:0,10:10:30.10:447,30,0	1/1:0,12:12:21.07:314,21,0
chr10	6821651	.	C	CTCTT	5750.45	PASS	AB=0.806;AC=19;AF=0.352;AN=54;BaseQRankSum=1.713;DP=430;FS=13.795;HRun=0;HaplotypeScore=126.5868;InbreedingCoeff=-0.2259;MQ=41.24;MQ0=3;MQRankSum=-0.283;QD=23.28;ReadPosRankSum=2.979;VQSLOD=3.8074;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:16:33.04:0,33,410	0/1:8,1:9:32.70:230,0,33	./.	0/0:9,0:5:3.74:0,4,37	1/1:7,6:12:27.03:511,27,0	0/0:20,0:20:53.78:0,54,728	0/0:14,0:14:29.85:0,30,341	0/1:15,5:17:78.58:529,0,79	0/1:20,0:20:25.56:26,0,664	0/1:7,8:15:53.79:620,0,54	0/1:9,5:14:99:401,0,117	1/1:4,4:8:10.28:308,10,0	0/1:10,9:19:99:650,0,281	0/1:4,2:6:27.66:146,0,28	0/1:8,10:18:99:732,0,183	0/0:28,0:27:53.54:0,54,970	0/0:16,0:16:17.51:0,18,256	0/1:11,1:11:65.92:168,0,66	0/0:26,0:24:51.05:0,51,464	0/0:26,0:26:66.20:0,66,900	0/1:8,2:10:97.92:205,0,98	0/1:9,9:18:99:697,0,168	0/1:11,3:14:99:209,0,185	0/1:11,3:13:76.28:197,0,76	0/1:24,0:24:2.22:2,0,619	0/1:11,2:13:99:120,0,194	0/0:15,0:15:38.86:0,39,513	0/0:6,0:6:15.05:0,15,240
chr10	6821655	.	TTC	T	314.14	PASS	AB=0.850;AC=8;AF=0.148;AN=54;BaseQRankSum=1.843;DP=409;FS=7.435;HRun=0;HaplotypeScore=121.2392;InbreedingCoeff=-0.1692;MQ=40.14;MQ0=3;MQRankSum=-0.549;QD=3.31;ReadPosRankSum=-5.154;VQSLOD=-0.1904;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:15:30.53:0,31,428	0/1:4,4:8:57.23:151,0,57	./.	0/1:8,0:5:0.43:0,0,37	0/1:9,4:12:71.83:97,0,72	0/0:20,0:20:52.38:0,52,804	0/0:13,0:13:30.05:0,30,431	0/1:14,3:14:58.70:59,0,191	0/0:19,0:19:51.16:0,51,841	0/1:13,1:14:3.82:4,0,244	0/1:12,1:13:14.80:15,0,193	0/0:7,1:8:11.77:0,12,76	0/0:19,0:19:47.35:0,47,539	0/0:6,0:6:8.93:0,9,76	0/0:17,0:17:40.53:0,41,416	0/0:28,0:27:68.82:0,69,1126	0/0:15,0:15:18.53:0,19,294	0/0:10,1:10:20.88:0,21,215	0/0:26,0:24:53.74:0,54,800	0/0:26,0:26:66.21:0,66,1076	0/1:7,1:8:27:27,0,169	0/0:16,1:17:2.01:0,2,379	0/0:12,0:12:25.21:0,25,290	0/1:9,4:12:84.50:85,0,96	0/0:24,0:24:54.17:0,54,898	0/0:13,0:13:34.40:0,34,532	0/0:14,0:14:39.13:0,39,699	0/0:5,0:5:15.05:0,15,254
chr10	6821784	.	CCGAATCT	C	2965.03	PASS	AC=20;AF=0.385;AN=52;BaseQRankSum=3.621;DP=162;FS=2.676;HRun=0;HaplotypeScore=47.3620;InbreedingCoeff=0.8253;MQ=110.81;MQ0=0;MQRankSum=-8.419;QD=48.61;ReadPosRankSum=1.837;VQSLOD=3.2565;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,9:9:18.06:456,18,0	0/0:7,0:7:21.07:0,21,846	0/0:12,0:12:36.12:0,36,1373	0/0:14,0:13:39.08:0,39,1196	0/0:7,0:7:21.07:0,21,848	1/1:0,6:6:6.02:152,6,0	1/1:3,7:10:21.07:553,21,0	0/0:11,0:11:30.10:0,30,1127	./.	0/0:7,0:7:21.07:0,21,848	0/0:2,0:2:6.02:0,6,242	0/0:3,0:3:9.03:0,9,363	0/0:3,0:3:9.03:0,9,363	0/0:6,0:6:15.05:0,15,603	0/0:6,0:6:18.06:0,18,707	1/1:0,5:5:15.05:395,15,0	1/1:2,8:10:15.05:354,15,0	0/0:6,0:6:18.02:0,18,625	1/1:0,1:1:3.01:79,3,0	1/1:2,8:10:21.07:511,21,0	0/0:8,0:8:20.66:0,21,828	0/0:4,0:4:12.04:0,12,476	0/0:1,0:1:3.01:0,3,121	0/0:4,0:4:12.04:0,12,485	1/1:0,7:7:18.06:474,18,0	1/1:0,2:2:6:103,6,0	./.	1/1:0,1:1:3.01:79,3,0
chr10	6823735	.	GGGCGTGCATCAGCAC	G	10680.71	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=12.500;DP=622;FS=4.840;HRun=0;HaplotypeScore=250.9538;InbreedingCoeff=0.9248;MQ=82.72;MQ0=0;MQRankSum=-11.806;QD=34.79;ReadPosRankSum=2.948;VQSLOD=3.9315;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:20,19:39:25.33:1058,25,0	1/1:1,5:6:11.79:497,12,0	0/0:30,0:30:35.30:0,35,1542	0/0:20,0:20:39.13:0,39,1931	1/1:9,12:21:20.62:689,21,0	0/0:23,0:23:54.19:0,54,3521	0/0:27,0:27:63.22:0,63,4122	1/1:18,0:18:9.01:101,9,0	0/0:27,0:27:63.22:0,63,3951	1/1:10,14:24:42.09:1319,42,0	1/1:6,12:18:8.75:360,9,0	1/1:14,15:29:33.11:1397,33,0	1/1:9,10:19:27.09:1124,27,0	1/1:10,14:24:33.11:1344,33,0	1/1:6,14:20:24.08:1000,24,0	0/0:24,0:24:48.16:0,48,3187	0/0:28,0:28:66.23:0,66,4476	1/1:8,6:14:12.04:508,12,0	0/0:26,0:26:60.21:0,60,3555	0/0:21,0:21:54.19:0,54,3764	1/1:23,14:37:5.35:253,5,0	1/1:4,9:13:15.05:635,15,0	1/1:2,7:9:6.02:232,6,0	1/1:9,7:16:5.35:163,5,0	0/0:17,0:17:42.14:0,42,2863	0/0:33,0:33:87.30:0,87,5695	0/0:26,0:26:72.25:0,72,4641	0/0:13,0:13:30.10:0,30,2055
chr10	6823747	.	GCAC	G	1106.11	PASS	AB=0.977;AC=16;AF=0.286;AN=56;BaseQRankSum=14.366;DP=569;FS=9.035;HRun=0;HaplotypeScore=141.6296;InbreedingCoeff=-0.0687;MQ=84.71;MQ0=0;MQRankSum=-12.278;QD=4.48;ReadPosRankSum=3.502;VQSLOD=1.8959;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:31,0:31:88.27:88,0,281	1/1:6,0:6:11.50:71,11,0	0/0:26,0:26:74.90:0,75,1493	0/0:19,0:19:47.34:0,47,1098	0/1:16,0:16:34.90:99,0,35	0/0:22,0:22:63.22:0,63,1525	0/0:23,0:23:69.24:0,69,1673	0/1:11,7:18:84.81:85,0,691	0/0:29,0:29:87.28:0,87,1989	0/1:20,0:20:99:145,0,549	0/1:15,0:15:25.81:26,0,134	0/1:26,0:26:99:166,0,330	0/1:19,0:19:99:137,0,233	0/1:20,0:20:99:141,0,201	0/1:19,0:19:70.28:118,0,70	0/0:20,0:20:60.21:0,60,1451	0/0:31,0:31:93.29:0,93,2118	0/1:10,0:10:60.05:60,0,171	0/0:26,0:26:78.27:0,78,1844	0/0:21,0:21:54.19:0,54,1328	0/1:27,0:27:18.45:18,0,323	0/1:13,0:13:7.12:83,0,7	1/1:7,0:7:5.83:36,6,0	0/0:13,0:13:8.89:0,9,97	0/0:18,0:18:54.17:0,54,1254	0/0:32,0:32:96.29:0,96,2279	0/0:28,0:28:84.29:0,84,2003	0/0:14,0:14:36.12:0,36,886
chr10	6824191	.	G	GA	2194.07	PASS	AB=0.978;AC=39;AF=0.750;AN=52;BaseQRankSum=-1.060;DP=317;FS=0.948;HRun=10;HaplotypeScore=54.8894;InbreedingCoeff=0.1808;MQ=36.49;MQ0=27;MQRankSum=-1.014;QD=8.22;ReadPosRankSum=-0.043;VQSLOD=1.4598;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:16:29.15:0,29,208	0/0:3,0:3:0.87:0,1,2	0/0:22,0:3:2.96:0,3,22	0/1:22,0:2:0:0,0,0	1/1:14,2:14:13.70:106,14,0	1/1:4,1:5:9.02:93,9,0	1/1:6,1:5:11.97:110,12,0	0/1:20,1:21:7.46:80,0,7	1/1:6,1:6:2.98:22,3,0	1/1:11,3:13:24.01:233,24,0	1/1:12,1:11:9.76:93,10,0	1/1:14,0:13:14.73:119,15,0	0/1:6,0:5:20.04:25,0,20	1/1:7,1:7:5.37:35,5,0	1/1:9,0:8:8.14:64,8,0	1/1:6,0:6:12.02:118,12,0	0/1:15,2:14:2.78:166,0,3	1/1:22,3:24:11.62:307,12,0	0/1:11,0:9:6.15:103,0,6	0/1:10,0:9:9.42:91,0,9	./.	1/1:4,1:5:5.75:44,6,0	./.	1/1:9,0:5:6.49:64,6,0	1/1:8,1:8:8.94:80,9,0	1/1:13,2:16:17.13:167,17,0	1/1:9,2:10:20.67:162,21,0	0/1:6,0:4:11.08:50,0,11
chr10	6824200	.	AAG	A	3374.43	PASS	AB=0.982;AC=44;AF=0.786;AN=56;BaseQRankSum=0.215;DP=418;FS=25.948;HRun=0;HaplotypeScore=79.7868;InbreedingCoeff=0.2200;MQ=34.53;MQ0=46;MQRankSum=-1.255;QD=8.83;ReadPosRankSum=-1.047;VQSLOD=1.4572;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:15,0:13:6.32:6,0,131	1/1:4,0:4:4.72:21,5,0	0/0:31,0:4:11.88:0,12,97	0/1:35,0:3:0.83:1,0,1	1/1:23,0:21:42.76:267,43,0	1/1:11,2:12:30.14:236,30,0	1/1:10,0:8:20.18:131,20,0	0/1:22,0:19:8.36:107,0,8	1/1:6,0:5:8.65:67,9,0	1/1:20,0:17:27.40:195,27,0	1/1:14,1:13:21.89:152,22,0	1/1:11,0:9:15.67:83,16,0	0/1:7,0:7:1.80:46,0,2	1/1:10,0:9:20.86:130,21,0	1/1:8,1:8:12.47:77,12,0	1/1:10,0:10:29.06:193,29,0	1/1:21,1:20:19.43:124,19,0	1/1:34,0:33:27.64:318,28,0	0/1:20,1:17:9.92:128,0,10	0/1:19,0:16:25.75:211,0,26	0/1:3,0:1:0:0,0,0	1/1:4,0:4:10.42:55,10,0	0/0:5,0:5:0.03:0,0,5	1/1:8,0:4:7.71:29,8,0	1/1:13,2:14:19.03:119,19,0	1/1:16,2:18:40.38:289,40,0	1/1:17,2:17:40.11:332,40,0	0/1:8,1:6:24.60:59,0,25
chr10	6824201	.	AG	A	3713.14	PASS	AB=0.977;AC=45;AF=0.833;AN=54;BaseQRankSum=0.138;DP=413;FS=26.902;HRun=1;HaplotypeScore=74.4740;InbreedingCoeff=0.2243;MQ=34.43;MQ0=46;MQRankSum=-1.882;QD=9.93;ReadPosRankSum=-1.435;VQSLOD=-0.2895;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:14,1:13:14.79:15,0,101	1/1:2,1:3:4.83:40,5,0	0/0:30,2:4:9.14:0,9,54	0/1:34,2:3:1.37:1,0,3	1/1:19,4:21:44.50:321,44,0	1/1:13,0:12:28.23:215,28,0	1/1:9,1:8:20:115,20,0	1/1:15,6:18:0.93:173,1,0	1/1:5,0:4:8.64:56,9,0	1/1:18,1:16:33.02:228,33,0	1/1:14,1:13:23.86:159,24,0	1/1:10,0:8:18.77:124,19,0	1/1:6,1:7:2.55:79,3,0	1/1:9,1:9:22.52:139,23,0	1/1:9,1:8:19.32:131,19,0	1/1:10,0:10:28.90:180,29,0	1/1:23,0:21:9.81:112,10,0	1/1:30,4:33:35.89:425,36,0	0/1:20,0:16:2.47:125,0,2	0/1:18,0:15:11.32:223,0,11	./.	1/1:3,1:4:10.64:56,11,0	0/0:5,0:5:0.03:0,0,5	1/1:8,0:4:8.34:47,8,0	1/1:14,0:13:19.15:107,19,0	1/1:18,0:18:44.37:292,44,0	1/1:19,0:17:34.90:314,35,0	0/1:9,0:6:12.43:36,0,12
chr10	6824219	.	AAG	A	1264.93	PASS	AB=0.991;AC=24;AF=0.429;AN=56;BaseQRankSum=5.135;DP=479;FS=35.757;HRun=0;HaplotypeScore=105.8130;InbreedingCoeff=-0.6262;MQ=38.95;MQ0=49;MQRankSum=-4.162;QD=3.34;ReadPosRankSum=3.505;VQSLOD=0.3187;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:15,1:14:49.40:146,0,49	0/0:6,0:6:8.75:0,9,60	0/0:44,0:8:4.37:0,4,92	0/0:42,0:7:10.11:0,10,69	0/1:28,0:26:96.72:116,0,97	0/1:14,0:13:5.98:6,0,143	0/1:15,0:13:9.88:55,0,10	0/1:30,0:27:35.67:36,0,196	1/1:6,0:6:1.71:59,2,0	0/1:15,2:15:20.62:132,0,21	0/1:13,0:12:39.06:68,0,39	0/1:11,0:9:28:59,0,28	0/1:9,0:9:13.28:13,0,57	0/1:10,0:9:9.06:66,0,9	0/1:12,0:10:15.40:15,0,82	0/1:13,0:13:24.25:24,0,133	0/1:26,0:23:0.76:1,0,137	0/1:32,0:32:58.92:290,0,59	0/1:29,0:25:99:123,0,131	0/1:18,0:15:17.87:18,0,124	0/0:3,0:1:2.99:0,3,24	0/1:4,0:4:9.61:10,0,33	0/1:7,0:7:13.67:29,0,14	0/0:5,0:2:5.88:0,6,46	0/1:18,0:17:33.01:33,0,91	0/1:16,0:16:50.33:50,0,69	0/1:22,1:20:26.13:26,0,162	0/1:12,0:10:38.59:39,0,101
chr10	6824227	.	AG	A	2289.24	PASS	AB=0.924;AC=44;AF=0.786;AN=56;BaseQRankSum=5.596;DP=458;FS=1.915;HRun=1;HaplotypeScore=98.8396;InbreedingCoeff=-0.1776;MQ=44.39;MQ0=39;MQRankSum=-5.337;QD=5.02;ReadPosRankSum=5.221;VQSLOD=0.7007;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:15,0:14:41.62:42,0,121	1/1:6,0:6:9.14:27,9,0	0/1:34,5:11:38.18:38,0,61	0/1:36,7:9:18.22:18,0,66	1/1:27,2:27:11.96:225,12,0	1/1:13,1:12:9.21:61,9,0	1/1:8,1:9:15.06:85,15,0	0/1:27,0:23:40.59:41,0,68	0/1:3,2:5:3.31:63,0,3	1/1:15,1:14:27.27:225,27,0	1/1:11,1:12:9.91:111,10,0	1/1:10,1:10:15.95:98,16,0	1/1:7,0:7:11.60:65,12,0	1/1:8,1:9:16.53:111,17,0	1/1:11,0:9:6.37:38,6,0	1/1:13,0:13:4.11:95,4,0	1/1:24,1:22:14.74:72,15,0	1/1:30,2:32:13.56:381,14,0	1/1:25,2:25:3.81:137,4,0	0/1:17,0:14:8.32:43,0,8	0/0:2,0:1:0.89:0,1,2	0/1:4,0:4:9.61:17,0,10	1/1:8,1:9:12.27:66,12,0	1/1:4,0:3:4.55:14,5,0	0/1:16,1:17:5.94:58,0,6	1/1:18,0:17:5.50:135,6,0	0/1:22,1:21:31.73:93,0,32	0/1:12,2:12:4.78:67,0,5
chr10	6824228	.	GA	G	4377.88	PASS	AB=0.972;AC=51;AF=0.911;AN=56;BaseQRankSum=-2.744;DP=465;FS=1.616;HRun=12;HaplotypeScore=94.0265;InbreedingCoeff=0.3345;MQ=44.74;MQ0=38;MQRankSum=-0.207;QD=10.37;ReadPosRankSum=5.372;VQSLOD=4.4800;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:15,1:15:1:1,0,176	1/1:2,4:6:14.94:115,15,0	0/1:39,1:12:16.45:16,0,63	0/0:43,0:9:13.26:0,13,90	1/1:16,13:27:49.72:353,50,0	1/1:7,8:13:23.72:222,24,0	1/1:2,7:9:17.93:138,18,0	1/1:13,15:25:25.04:240,25,0	0/1:6,0:6:4.56:62,0,5	1/1:12,5:15:35.36:245,35,0	1/1:7,5:12:0.29:170,0,0	1/1:8,3:10:16.62:100,17,0	1/1:3,4:7:15.82:116,16,0	1/1:7,1:8:19.32:123,19,0	1/1:6,5:9:13.94:100,14,0	1/1:5,7:12:26.87:206,27,0	1/1:8,17:22:31.62:230,32,0	1/1:23,9:32:31.36:298,31,0	1/1:12,15:25:44:369,44,0	1/1:10,7:14:10.04:154,10,0	1/1:1,1:1:2.99:23,3,0	1/1:2,2:4:5.38:45,5,0	1/1:5,4:9:4.60:120,5,0	1/1:2,3:4:8.96:69,9,0	1/1:7,10:17:19.71:137,20,0	1/1:13,5:17:21.73:210,22,0	1/1:12,11:21:47.69:335,48,0	1/1:11,4:13:25.25:178,25,0
chr10	6824263	.	G	GA	2411.53	PASS	AB=0.700;AC=24;AF=0.429;AN=56;BaseQRankSum=-1.982;DP=432;FS=3.522;HRun=13;HaplotypeScore=95.7883;InbreedingCoeff=0.2308;MQ=68.69;MQ0=4;MQRankSum=-2.611;QD=9.17;ReadPosRankSum=0.895;VQSLOD=3.1869;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:4,13:20:6.08:196,0,6	1/1:1,5:6:6.47:128,6,0	0/1:36,1:22:18.98:19,0,60	0/1:28,0:8:5.86:6,0,14	0/1:14,11:25:21.54:238,0,22	0/0:11,0:11:26.66:0,27,180	0/0:11,0:11:17.79:0,18,123	0/1:12,10:22:32.16:188,0,32	0/0:6,0:6:11.67:0,12,67	0/1:7,12:19:16.58:269,0,17	0/1:5,9:15:6.48:192,0,6	1/1:1,10:11:21.91:196,22,0	0/1:4,7:11:24.89:71,0,25	1/1:3,5:8:1.32:145,1,0	1/1:1,3:4:9.01:83,9,0	0/0:10,1:12:12.63:0,13,151	0/0:24,0:24:47.51:0,48,323	1/1:5,19:25:36.32:467,36,0	0/0:13,0:14:23.91:0,24,144	0/0:13,0:14:31.28:0,31,199	1/1:1,3:4:6.01:56,6,0	0/1:2,5:7:5.56:96,0,6	1/1:4,7:11:3.44:174,3,0	0/1:3,3:7:12.41:70,0,12	0/0:19,0:21:20.52:0,21,107	0/0:6,0:15:17.05:0,17,49	0/0:10,0:21:26.34:0,26,91	0/0:4,0:20:40.31:0,40,139
chr10	6824812	.	GTTGGTACA	G	11934.70	PASS	AB=0.530;AC=20;AF=0.357;AN=56;BaseQRankSum=13.761;DP=745;FS=3.367;HRun=0;HaplotypeScore=238.9177;InbreedingCoeff=0.8078;MQ=88.55;MQ0=0;MQRankSum=-17.062;QD=57.66;ReadPosRankSum=-1.059;VQSLOD=4.0612;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,123,5361	0/0:14,0:14:39.10:0,39,1524	0/0:27,0:27:69.97:0,70,2495	0/0:35,0:35:96.33:0,96,3715	0/0:23,0:23:54.19:0,54,2197	1/1:2,17:19:51:1124,51,0	1/1:4,16:20:42.10:1076,42,0	0/0:24,0:24:66.23:0,66,2692	0/1:2,18:20:81.86:1214,0,82	0/0:31,0:31:90.27:0,90,3675	0/0:12,0:12:33.11:0,33,1365	0/0:42,0:42:99:0,120,5139	0/0:33,0:33:96.33:0,96,4206	0/0:30,0:30:87.30:0,87,3549	0/0:41,0:41:99:0,117,5035	1/1:2,19:22:54.10:1340,54,0	1/1:5,21:26:48.12:1260,48,0	0/0:29,0:29:81.28:0,81,3338	1/1:7,12:19:36.10:928,36,0	1/1:4,6:10:9.03:255,9,0	0/0:79,0:79:99:0,226,9269	0/0:18,0:18:51.16:0,51,2072	0/0:23,0:23:60.21:0,60,2579	0/0:34,0:34:99:0,102,4494	1/1:2,22:24:60.03:1408,60,0	0/1:4,28:32:45.76:2143,0,46	1/1:1,13:14:38.87:1102,39,0	1/1:0,1:1:3.01:85,3,0
chr10	6825124	.	G	GC	4212.75	PASS	AB=0.930;AC=32;AF=0.941;AN=34;BaseQRankSum=1.657;DP=155;FS=1.526;HRun=1;HaplotypeScore=135.0127;InbreedingCoeff=0.2051;MQ=78.20;MQ0=2;MQRankSum=-2.904;QD=27.72;ReadPosRankSum=3.358;VQSLOD=4.8420;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	1/1:0,5:5:15.05:227,15,0	0/1:13,0:8:0.27:0,0,29	0/1:23,2:15:40.06:118,0,40	1/1:0,5:5:14.98:196,15,0	./.	./.	./.	./.	1/1:0,14:14:33.11:493,33,0	1/1:0,7:6:9.03:133,9,0	1/1:1,12:13:39.06:552,39,0	1/1:1,8:9:27.03:366,27,0	1/1:0,9:9:27.09:403,27,0	1/1:0,12:12:30.10:445,30,0	./.	./.	1/1:0,6:6:18.06:271,18,0	1/1:0,0:1:3.01:35,3,0	./.	1/1:0,7:7:12.04:173,12,0	1/1:0,7:7:18.06:271,18,0	1/1:0,10:10:21.07:315,21,0	1/1:0,6:6:9.03:134,9,0	./.	1/1:0,2:2:6.02:80,6,0	./.	./.
chr10	6825170	.	AG	A	1196.54	PASS	AB=0.870;AC=27;AF=0.900;AN=30;BaseQRankSum=1.312;DP=119;FS=7.547;HRun=1;HaplotypeScore=117.6800;InbreedingCoeff=0.4213;MQ=104.31;MQ0=4;MQRankSum=-4.589;QD=12.46;ReadPosRankSum=3.352;VQSLOD=2.3574;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	1/1:0,3:3:5.96:43,6,0	0/1:17,1:12:30.02:30,0,83	0/0:22,0:15:26.98:0,27,213	1/1:1,8:10:19.40:122,19,0	./.	./.	1/1:2,4:6:14.89:110,15,0	./.	1/1:1,6:8:20.83:148,21,0	1/1:0,4:3:8.97:77,9,0	1/1:1,3:4:11.95:92,12,0	1/1:1,3:6:15.84:119,16,0	./.	1/1:0,5:5:12.79:86,13,0	./.	./.	1/1:1,8:8:20.94:188,21,0	./.	./.	1/1:0,3:3:2.97:20,3,0	1/1:0,3:3:8.90:65,9,0	1/1:2,3:7:15.58:92,16,0	1/1:1,6:7:14.50:110,15,0	./.	./.	./.	./.
chr10	6825172	.	AG	A	1216.27	PASS	AB=1.000;AC=27;AF=0.900;AN=30;BaseQRankSum=1.037;DP=119;FS=5.571;HRun=1;HaplotypeScore=117.2875;InbreedingCoeff=0.3623;MQ=104.33;MQ0=4;MQRankSum=-3.803;QD=12.54;ReadPosRankSum=2.589;VQSLOD=2.5630;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	1/1:2,1:3:5.96:45,6,0	0/1:21,0:14:24.19:24,0,67	0/0:22,0:14:7.62:0,8,172	1/1:7,3:10:19.40:124,19,0	./.	./.	1/1:5,2:6:14.88:109,15,0	./.	1/1:6,2:8:20.79:147,21,0	1/1:2,2:3:8.97:77,9,0	1/1:1,3:4:11.96:94,12,0	1/1:3,3:6:15.85:123,16,0	./.	1/1:4,1:5:13.15:88,13,0	./.	./.	1/1:6,3:8:20.97:192,21,0	./.	./.	1/1:2,1:3:2.97:20,3,0	1/1:2,1:3:8.90:65,9,0	1/1:6,1:7:15.96:93,16,0	1/1:2,5:7:14.51:114,15,0	./.	./.	./.	./.
chr10	6825181	.	AGAAAAAAACGAAAAAGGCGG	A	4477.65	PASS	AB=0.881;AC=25;AF=0.833;AN=30;BaseQRankSum=2.983;DP=111;FS=1.035;HRun=0;HaplotypeScore=154.0567;InbreedingCoeff=0.3054;MQ=110.50;MQ0=3;MQRankSum=-4.241;QD=49.20;ReadPosRankSum=5.208;VQSLOD=3.9744;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	1/1:2,1:3:3.01:156,3,0	0/1:18,0:15:3.74:4,0,411	0/0:20,0:14:35.07:0,35,618	0/1:7,3:11:0.39:559,0,0	./.	./.	1/1:3,1:3:3.01:155,3,0	./.	1/1:5,1:7:6.02:312,6,0	1/1:2,2:3:6.02:303,6,0	1/1:0,3:3:9.03:467,9,0	1/1:1,4:6:18.06:859,18,0	./.	1/1:5,1:6:9.03:267,9,0	./.	./.	1/1:6,3:8:5.91:464,6,0	./.	./.	0/1:3,0:3:0:0,0,0	1/1:2,1:3:3.01:154,3,0	1/1:3,1:5:6.02:314,6,0	1/1:2,5:7:9.03:464,9,0	./.	./.	./.	./.
chr10	6825189	.	ACG	A	2379.20	PASS	AB=1.000;AC=27;AF=0.900;AN=30;BaseQRankSum=1.422;DP=123;FS=4.292;HRun=0;HaplotypeScore=127.1366;InbreedingCoeff=0.5413;MQ=97.86;MQ0=1;MQRankSum=-4.340;QD=22.03;ReadPosRankSum=0.866;VQSLOD=3.9448;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	1/1:4,1:5:15.02:154,15,0	0/1:14,0:12:18.96:19,0,85	0/0:13,1:10:18.27:0,18,154	1/1:10,2:12:32.92:290,33,0	./.	./.	1/1:5,3:8:20.95:206,21,0	./.	1/1:2,0:3:9.01:82,9,0	1/1:4,0:4:11.96:101,12,0	1/1:9,1:10:30.03:284,30,0	1/1:12,1:14:42.04:392,42,0	1/1:4,1:5:15.01:141,15,0	1/1:4,1:5:15.01:143,15,0	./.	./.	1/1:4,1:5:15.03:155,15,0	./.	./.	./.	1/1:4,1:5:15.02:151,15,0	1/1:3,4:7:21.02:222,21,0	1/1:10,1:11:15.49:145,15,0	./.	./.	./.	./.
chr10	6825196	.	AGGCGG	A	5376.63	PASS	AB=0.923;AC=27;AF=0.900;AN=30;BaseQRankSum=-0.606;DP=131;FS=1.312;HRun=0;HaplotypeScore=115.4828;InbreedingCoeff=0.5171;MQ=100.84;MQ0=1;MQRankSum=-3.272;QD=47.16;ReadPosRankSum=3.955;VQSLOD=5.2827;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	1/1:1,5:6:14.59:321,15,0	0/1:11,1:10:70.99:71,0,138	0/0:15,0:12:12.89:0,13,79	1/1:4,8:12:33.11:671,33,0	./.	./.	1/1:1,8:9:21.07:443,21,0	./.	1/1:2,1:3:9.03:171,9,0	1/1:2,2:4:12.04:228,12,0	1/1:3,8:11:30.10:630,30,0	1/1:5,9:14:42.14:866,42,0	1/1:0,7:7:15.05:335,15,0	1/1:3,2:5:12.04:244,12,0	./.	./.	1/1:4,2:6:15.05:292,15,0	./.	./.	./.	1/1:1,5:6:18.02:340,18,0	1/1:3,5:8:24.08:484,24,0	1/1:5,6:11:15.05:281,15,0	./.	./.	./.	./.
chr10	6825361	.	ACAAACCAAACCAAAC	A	1324.67	PASS	AC=20;AF=0.370;AN=54;BaseQRankSum=4.841;DP=543;FS=2.335;HRun=0;HaplotypeScore=195.9965;InbreedingCoeff=0.6108;MQ=56.97;MQ0=24;MQRankSum=-3.994;QD=9.89;ReadPosRankSum=0.805;VQSLOD=2.8678;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:35:46.67:0,47,1717	0/0:5,0:5:3.01:0,3,213	0/0:41,0:17:0:0,0,0	0/0:65,0:29:3.22:0,3,13	0/0:10,0:10:21.07:0,21,1175	1/1:13,1:14:3.01:117,3,0	1/1:15,1:16:3.01:123,3,0	0/0:34,0:33:6.01:0,6,87	1/1:8,3:11:9.03:370,9,0	0/0:17,0:23:30.10:0,30,893	0/0:12,0:12:15.05:0,15,760	0/0:18,0:18:39.12:0,39,1903	0/0:16,0:16:24.07:0,24,1369	0/0:17,0:17:36.12:0,36,2209	0/0:29,0:29:54.18:0,54,3183	1/1:10,0:10:3.01:46,3,0	1/1:20,3:23:0.63:119,1,0	0/0:26,0:26:36.12:0,36,2483	./.	1/1:9,2:11:6.02:247,6,0	0/0:26,0:25:33.10:0,33,1983	0/0:3,0:3:3.01:0,3,60	0/0:8,0:7:3.01:0,3,186	0/0:33,0:33:51.18:0,51,3324	1/1:10,3:13:6.02:225,6,0	1/1:17,0:17:3.01:30,3,0	1/1:12,0:13:3.01:105,3,0	1/1:5,0:6:3.01:105,3,0
chr10	6825509	.	C	CAG	1754.71	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=1.060;DP=396;FS=27.090;HRun=0;HaplotypeScore=80.0283;InbreedingCoeff=0.8389;MQ=63.45;MQ0=3;MQRankSum=-3.571;QD=39.88;ReadPosRankSum=1.656;VQSLOD=2.6378;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:39.11:0,39,533	0/0:3,0:3:6.02:0,6,88	0/0:23,0:11:9.48:0,9,203	0/0:21,0:15:32.41:0,32,402	0/0:21,0:21:39.09:0,39,525	0/0:14,0:14:38.16:0,38,527	0/0:7,0:7:15.04:0,15,196	0/0:33,0:33:90.25:0,90,1232	0/0:6,0:6:18.04:0,18,245	0/0:19,0:19:54.18:0,54,790	0/0:11,0:10:21.07:0,21,308	0/0:12,0:12:27.05:0,27,373	0/0:17,0:17:33.10:0,33,485	0/0:9,0:9:18.06:0,18,265	0/0:17,0:17:31.66:0,32,446	0/0:12,0:12:30.10:0,30,440	0/0:20,0:20:42.14:0,42,618	0/0:19,0:19:48.16:0,48,701	0/0:22,0:20:60.17:0,60,822	0/0:3,0:3:3.01:0,3,42	0/0:13,0:13:30.05:0,30,370	0/0:2,0:2:6.02:0,6,88	0/0:12,0:12:15.04:0,15,203	0/0:8,0:8:24.08:0,24,343	0/0:12,0:12:27.07:0,27,378	1/1:1,19:20:51.17:941,51,0	1/1:4,8:12:15.05:280,15,0	1/1:0,12:12:36.12:673,36,0
chr10	6825527	.	T	TTC	1584.81	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=-7.166;DP=339;FS=14.953;HRun=0;HaplotypeScore=69.2598;InbreedingCoeff=0.5971;MQ=63.39;MQ0=7;MQRankSum=4.197;QD=7.96;ReadPosRankSum=6.395;VQSLOD=1.1990;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:17:32.81:0,33,304	1/1:1,0:1:2.96:19,3,0	0/1:21,0:11:1.42:1,0,70	0/0:15,0:9:18.07:0,18,175	1/1:13,1:14:13.36:151,13,0	0/0:17,0:17:41.76:0,42,324	0/1:4,0:4:6.47:6,0,32	1/1:29,2:29:49.06:492,49,0	0/0:1,0:1:2.96:0,3,19	1/1:15,0:15:39.04:258,39,0	0/1:8,0:7:3.77:41,0,4	1/1:12,0:11:16.68:82,17,0	1/1:11,0:11:16.47:75,16,0	1/1:11,0:10:17.22:90,17,0	1/1:19,0:19:12.82:138,13,0	0/0:7,0:7:1.18:0,1,84	0/0:20,0:18:27.63:0,28,261	1/1:22,0:22:31.95:233,32,0	0/0:14,0:10:24.73:0,25,199	0/0:3,0:3:8.75:0,9,52	0/1:11,0:10:5.84:55,0,6	1/1:3,0:3:8.63:46,9,0	1/1:5,1:6:8.79:58,9,0	1/1:3,0:3:5.62:27,6,0	0/0:11,0:11:18.89:0,19,149	0/0:20,0:19:25.70:0,26,263	0/1:7,0:6:9.43:9,0,16	0/0:14,0:13:24.36:0,24,151
chr10	6825528	.	T	TC	3217.38	PASS	AB=0.775;AC=28;AF=0.500;AN=56;BaseQRankSum=-9.795;DP=344;FS=15.987;HRun=0;HaplotypeScore=57.3919;InbreedingCoeff=0.7397;MQ=63.30;MQ0=8;MQRankSum=4.823;QD=16.58;ReadPosRankSum=5.936;VQSLOD=4.5993;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:18:27.90:0,28,272	1/1:1,0:1:3.01:36,3,0	0/1:21,0:11:4.10:4,0,68	0/0:14,0:8:18.59:0,19,178	1/1:9,6:15:18.48:170,18,0	0/0:16,0:16:41.79:0,42,327	0/0:4,0:4:11.54:0,12,67	1/1:7,25:30:54.87:722,55,0	0/0:1,0:1:2.97:0,3,20	1/1:1,15:16:40.18:364,40,0	1/1:4,5:7:2.17:126,2,0	1/1:2,11:12:18:201,18,0	1/1:0,11:11:18.05:199,18,0	1/1:1,10:10:18.05:213,18,0	1/1:3,18:21:23.99:374,24,0	0/0:7,0:7:17.55:0,18,116	0/0:20,0:18:45.10:0,45,324	1/1:2,20:22:48.93:599,49,0	0/0:14,0:10:24.39:0,24,200	0/0:3,0:3:3.56:0,4,35	0/1:2,8:10:7.69:157,0,8	1/1:0,3:3:9.03:107,9,0	1/1:1,4:5:9:86,9,0	1/1:0,3:3:6.02:69,6,0	0/0:11,0:11:23.52:0,24,166	0/0:20,0:19:51.34:0,51,381	0/0:7,0:6:8.57:0,9,47	0/0:14,0:13:26.17:0,26,186
chr10	6825805	.	A	AT	7200.89	PASS	AB=0.571;AC=21;AF=0.375;AN=56;BaseQRankSum=-12.417;DP=572;FS=8.455;HRun=6;HaplotypeScore=50.6043;InbreedingCoeff=0.9260;MQ=71.54;MQ0=0;MQRankSum=-2.213;QD=30.91;ReadPosRankSum=2.327;VQSLOD=5.2097;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,111,1124	0/0:5,0:5:11.99:0,12,111	0/0:16,0:16:19.45:0,19,252	0/0:10,0:10:21.01:0,21,202	0/0:24,0:24:72.11:0,72,713	1/1:3,21:24:57.18:717,57,0	1/1:1,21:22:51.08:621,51,0	0/0:29,0:29:80.35:0,80,777	1/1:1,13:14:42.13:523,42,0	0/0:37,0:37:99:0,111,1123	0/0:12,0:12:30.06:0,30,306	0/0:25,0:25:69.14:0,69,696	0/0:8,0:8:24.05:0,24,245	0/0:19,0:19:51.11:0,51,520	0/0:29,0:29:78.14:0,78,784	1/1:0,13:13:33.11:415,33,0	1/1:1,27:28:75.24:943,75,0	0/0:22,0:22:66.11:0,66,662	1/1:0,16:16:45.13:554,45,0	1/1:0,12:12:36.11:451,36,0	0/0:17,0:17:45.09:0,45,454	0/0:12,0:12:36.08:0,36,367	0/0:12,0:12:27.06:0,27,275	0/0:24,0:24:69.15:0,69,698	1/1:0,17:17:39.12:490,39,0	0/1:8,24:31:9:790,0,9	1/1:1,32:33:81.26:1019,81,0	1/1:0,22:22:54.17:679,54,0
chr10	6826724	.	TTGTGTGTGTGTG	T	4744.98	PASS	AB=1.000;AC=29;AF=0.537;AN=54;BaseQRankSum=0.848;DP=415;FS=2.532;HRun=0;HaplotypeScore=163.7218;InbreedingCoeff=0.6924;MQ=62.39;MQ0=8;MQRankSum=-4.365;QD=23.15;ReadPosRankSum=4.354;VQSLOD=4.1326;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:14,0:13:0:0,0,0	1/1:4,0:5:3.01:51,3,0	0/0:15,0:10:2.04:0,2,6	./.	1/1:7,9:16:29.92:745,30,0	0/0:14,0:14:9.03:0,9,352	0/0:20,0:18:22.59:0,23,817	1/1:21,0:20:3:25,3,0	0/0:16,0:17:5.62:0,6,224	1/1:10,6:16:17.72:510,18,0	1/1:7,6:13:14.42:220,14,0	1/1:6,5:11:3.92:492,4,0	1/1:9,5:15:21:595,21,0	1/1:8,8:16:12.04:413,12,0	1/1:10,10:20:30.10:1032,30,0	0/0:3,0:16:2.87:0,3,156	0/0:22,0:21:12.04:0,12,326	1/1:8,3:10:9.03:310,9,0	0/0:16,0:15:15.09:0,15,396	0/0:11,0:11:12.04:0,12,516	1/1:18,0:18:3.01:37,3,0	1/1:5,3:7:6.02:206,6,0	1/1:6,1:8:3.01:91,3,0	1/1:8,5:13:2.94:18,3,0	0/0:5,0:17:5.72:0,6,309	0/0:17,0:17:39.13:0,39,1538	0/0:16,0:18:29.53:0,30,1018	0/0:4,0:10:12.93:0,13,464
chr10	6826800	.	C	CTT	3391.21	PASS	AB=0.791;AC=45;AF=0.804;AN=56;BaseQRankSum=1.017;DP=424;FS=5.471;HRun=17;HaplotypeScore=129.3870;InbreedingCoeff=0.4027;MQ=50.73;MQ0=13;MQRankSum=-3.954;QD=9.12;ReadPosRankSum=-3.529;VQSLOD=0.3214;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:21,1:18:36.44:227,36,0	1/1:9,0:11:17.24:117,17,0	0/0:14,0:8:4.58:0,5,17	0/0:12,0:11:0.98:0,1,17	0/1:25,1:26:7.85:133,0,8	1/1:10,1:12:23.74:168,24,0	1/1:10,3:16:25.96:229,26,0	0/1:17,6:24:14.37:86,0,14	1/1:11,0:11:20.09:136,20,0	1/1:22,1:23:26.91:234,27,0	1/1:12,1:13:17.48:129,17,0	1/1:15,1:17:30.25:195,30,0	1/1:8,0:9:0.24:37,0,0	1/1:11,1:10:14.85:109,15,0	1/1:16,0:19:20.67:205,21,0	1/1:9,3:13:23.15:199,23,0	1/1:18,1:19:32.73:220,33,0	1/1:13,0:12:22.81:150,23,0	1/1:10,4:14:15.46:192,15,0	1/1:16,0:17:23.71:147,24,0	0/1:6,5:11:12.13:61,0,12	1/1:12,0:15:9.64:95,10,0	1/1:11,2:16:2.70:130,3,0	1/1:8,1:8:2.87:28,3,0	1/1:10,0:11:22.11:147,22,0	0/0:12,0:17:17.47:0,17,78	0/0:5,0:8:4.96:0,5,21	1/1:5,0:3:2.92:17,3,0
chr10	6826986	.	G	GC	737.71	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.757;DP=528;FS=3.977;HRun=7;HaplotypeScore=53.1420;InbreedingCoeff=0.9908;MQ=89.00;MQ0=0;MQRankSum=-2.346;QD=20.49;ReadPosRankSum=1.267;VQSLOD=3.2176;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:10,26:36:69.21:833,69,0	0/0:10,0:10:24.03:0,24,232	0/0:23,0:23:62.56:0,63,579	0/0:18,0:18:38.19:0,38,381	0/0:8,0:8:21.02:0,21,197	0/0:16,0:16:48.06:0,48,458	0/0:15,0:15:39.04:0,39,370	0/0:23,0:23:54.07:0,54,517	0/0:20,0:20:57.02:0,57,534	0/0:21,0:21:60.09:0,60,576	0/0:17,0:17:47.75:0,48,445	0/0:15,0:15:42.02:0,42,396	0/0:20,0:20:54.09:0,54,521	0/0:22,0:20:54.03:0,54,508	0/0:28,0:28:63.10:0,63,608	0/0:23,0:23:60.04:0,60,565	0/0:27,0:27:78.10:0,78,747	0/0:17,0:17:45.07:0,45,435	0/0:14,0:14:39.06:0,39,376	0/0:13,0:13:29.83:0,30,273	0/0:30,0:30:77.54:0,78,715	0/0:10,0:10:27.02:0,27,255	0/0:15,0:15:36.05:0,36,344	0/0:27,0:27:72.09:0,72,688	0/0:15,0:15:42.07:0,42,406	0/0:20,0:20:48.06:0,48,460	0/0:13,0:13:36.06:0,36,347	0/0:12,0:12:27.03:0,27,261
chr10	6828082	.	CCG	C	2602.91	PASS	AB=0.833;AC=46;AF=0.821;AN=56;BaseQRankSum=3.492;DP=434;FS=22.973;HRun=0;HaplotypeScore=118.1186;InbreedingCoeff=0.4967;MQ=65.87;MQ0=2;MQRankSum=1.404;QD=6.49;ReadPosRankSum=1.791;VQSLOD=1.6311;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,0:28:8.46:41,8,0	1/1:5,0:7:2.27:10,2,0	0/1:12,0:7:0:0,0,0	0/1:16,0:13:5.53:6,0,26	1/1:16,0:17:14:64,14,0	1/1:5,4:9:3.01:36,3,0	1/1:5,16:21:33.10:400,33,0	1/1:12,0:20:19.52:82,20,0	1/1:4,4:8:18.04:206,18,0	1/1:19,0:19:27.80:132,28,0	1/1:8,0:10:4.87:19,5,0	1/1:12,0:13:3.81:29,4,0	1/1:2,0:2:2.60:10,3,0	1/1:9,0:12:13.67:64,14,0	1/1:7,0:10:3.40:18,3,0	1/1:10,3:13:21.05:243,21,0	1/1:15,13:28:56.85:640,57,0	0/1:19,0:21:4.93:11,0,5	1/1:14,1:15:17.99:191,18,0	1/1:6,13:19:18.06:218,18,0	0/1:5,0:26:0:0,0,1	1/1:6,0:8:3.48:12,3,0	1/1:9,0:10:5.46:28,5,0	1/1:40,0:38:13.60:69,14,0	1/1:6,4:10:18.06:218,18,0	0/0:16,0:16:21.15:0,21,462	0/0:10,0:10:15.04:0,15,188	0/0:6,0:6:9.03:0,9,143
chr10	6828105	.	GAC	G	1293.19	PASS	AB=0.993;AC=36;AF=0.783;AN=46;BaseQRankSum=-0.403;DP=532;FS=8.135;HRun=0;HaplotypeScore=163.5208;InbreedingCoeff=0.2233;MQ=45.19;MQ0=17;MQRankSum=0.279;QD=2.98;ReadPosRankSum=0.568;VQSLOD=2.3057;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:43,2:39:13.75:210,0,14	./.	./.	./.	0/1:18,0:18:0.02:0,0,0	1/1:10,1:12:3.01:32,3,0	1/1:29,3:30:11.90:129,12,0	0/0:21,0:19:2.97:0,3,20	1/1:6,7:12:17.84:163,18,0	1/1:27,0:26:16.20:68,16,0	0/1:12,0:12:0:0,0,0	0/1:18,0:18:0.12:0,0,0	1/1:6,0:5:2.80:13,3,0	1/1:18,0:18:5.75:29,6,0	1/1:13,0:13:2.65:13,3,0	1/1:11,6:16:5.97:52,6,0	1/1:32,9:40:2.93:264,3,0	0/1:28,0:26:1.50:41,0,1	1/1:9,2:10:1.57:58,2,0	1/1:15,2:17:2.84:32,3,0	./.	0/0:12,0:10:0:0,0,0	./.	0/1:45,0:38:0:0,0,0	1/1:9,5:15:14.93:162,15,0	1/1:19,0:21:12.93:67,13,0	1/1:6,0:12:4.84:27,5,0	1/1:4,0:9:5.68:28,6,0
chr10	6828143	.	CACACACACG	C	1588.39	PASS	AB=0.988;AC=20;AF=0.370;AN=54;BaseQRankSum=4.926;DP=575;FS=3.841;HRun=0;HaplotypeScore=184.6040;InbreedingCoeff=0.5300;MQ=46.87;MQ0=22;MQRankSum=-3.692;QD=6.38;ReadPosRankSum=0.462;VQSLOD=2.7579;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:41:83.32:0,83,1854	1/1:9,0:9:0.70:2,1,0	0/0:18,0:6:14.11:0,14,235	0/0:23,0:12:35.98:0,36,457	0/1:16,0:16:0:0,0,1	0/0:18,0:18:35.36:0,35,540	0/0:27,0:24:48.07:0,48,783	1/1:22,0:21:21.67:585,22,0	0/0:18,0:16:30.11:0,30,676	1/1:17,1:17:3.84:525,4,0	0/1:11,0:11:0:0,0,0	0/0:15,1:16:0.38:0,0,1	1/1:11,0:11:5.51:47,6,0	1/1:17,1:18:11.76:239,12,0	1/1:19,0:18:3.01:30,3,0	0/0:17,0:16:23.48:0,23,310	0/0:40,0:39:90.23:0,90,1614	1/1:23,0:23:3.33:244,3,0	0/0:18,0:18:42.19:0,42,788	0/0:9,0:9:17.89:0,18,285	./.	0/1:12,1:11:0.01:0,0,0	0/0:9,0:9:0:0,0,0	0/1:49,0:48:0.17:2,0,0	0/0:15,0:15:33.11:0,33,659	0/1:28,0:26:52.86:53,0,738	0/1:12,0:11:10.68:11,0,178	0/0:9,0:9:3.51:0,4,190
chr10	6828145	.	CACACACG	C	1609.75	PASS	AB=0.963;AC=23;AF=0.426;AN=54;BaseQRankSum=5.350;DP=567;FS=9.093;HRun=0;HaplotypeScore=171.4924;InbreedingCoeff=0.5155;MQ=47.47;MQ0=19;MQRankSum=-4.701;QD=5.81;ReadPosRankSum=0.402;VQSLOD=2.1947;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:42:83.61:0,84,1560	1/1:2,7:9:0.49:2,0,0	0/0:18,0:6:14.10:0,14,188	0/0:24,0:12:35.98:0,36,404	0/1:14,1:15:0:0,0,0	0/0:18,0:18:35.95:0,36,541	0/0:25,0:23:45.12:0,45,726	1/1:23,0:22:27.04:662,27,0	0/0:19,0:17:32.84:0,33,637	1/1:18,0:18:24.40:485,24,0	0/1:7,3:10:0:0,0,0	0/1:16,0:16:0:0,0,1	1/1:11,0:11:5.60:85,6,0	1/1:18,1:19:11.63:158,12,0	1/1:18,1:18:2.86:31,3,0	0/0:14,0:14:17.40:0,17,230	0/0:43,0:42:87.04:0,87,1443	1/1:22,0:22:8.30:205,8,0	0/0:19,0:19:43.40:0,43,769	0/0:9,0:9:14.90:0,15,243	./.	0/1:13,0:11:0:0,0,0	0/1:9,0:9:0.03:0,0,0	0/1:47,2:48:0.17:1,0,0	0/0:15,0:15:33.09:0,33,543	0/1:25,0:24:76.89:77,0,578	0/1:11,0:10:22.99:23,0,136	0/1:8,0:8:39.13:39,0,124
chr10	6828147	.	CACACG	C	2088.71	PASS	AB=0.615;AC=20;AF=0.385;AN=52;BaseQRankSum=5.719;DP=539;FS=9.491;HRun=0;HaplotypeScore=151.2545;InbreedingCoeff=0.6332;MQ=48.26;MQ0=19;MQRankSum=-4.640;QD=9.00;ReadPosRankSum=0.358;VQSLOD=2.2044;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:41:83.93:0,84,1254	1/1:8,0:8:0.61:2,1,0	0/0:18,0:6:14.72:0,15,187	0/0:24,0:12:35.98:0,36,403	0/1:1,14:15:0:0,0,0	0/0:16,0:16:35.72:0,36,525	0/0:26,0:24:51.14:0,51,719	1/1:21,0:20:57.14:715,57,0	0/0:19,0:17:23.87:0,24,499	1/1:1,15:16:42:704,42,0	./.	0/1:2,14:16:0.07:0,0,1	1/1:3,8:11:5.77:88,6,0	1/1:2,16:18:11.79:234,12,0	1/1:3,16:18:2.66:65,3,0	0/0:13,0:13:11.42:0,11,173	0/0:41,0:40:92.88:0,93,1240	1/1:1,19:20:18.06:356,18,0	0/0:20,0:20:57.16:0,57,799	0/0:8,0:8:12.04:0,12,197	./.	0/1:4,9:11:0:0,0,0	0/1:2,6:8:0.23:0,0,0	0/1:3,40:43:0:0,0,0	0/0:15,0:15:33.07:0,33,419	0/1:23,1:23:79.47:79,0,558	0/0:11,0:10:2.03:0,2,152	0/0:8,0:8:6.72:0,7,124
chr10	6828151	.	CG	C	1450.40	PASS	AB=0.996;AC=20;AF=0.370;AN=54;BaseQRankSum=4.987;DP=517;FS=7.161;HRun=2;HaplotypeScore=129.0482;InbreedingCoeff=0.7164;MQ=53.70;MQ0=10;MQRankSum=-4.055;QD=6.84;ReadPosRankSum=-0.277;VQSLOD=0.3611;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:35:84.04:0,84,1130	1/1:8,0:8:0.56:2,1,0	0/0:22,0:10:20.72:0,21,283	0/0:25,0:13:38.99:0,39,447	0/1:15,0:15:0:0,0,1	0/0:14,0:14:33.11:0,33,481	0/0:22,0:22:54.14:0,54,734	1/1:0,22:21:60.19:771,60,0	0/0:19,0:18:33.03:0,33,510	1/1:16,0:16:42.05:474,42,0	0/1:9,0:9:0:0,0,0	0/1:16,0:16:0:0,0,0	1/1:8,1:11:6.01:63,6,0	1/1:18,0:18:12:124,12,0	1/1:17,1:18:2.74:20,3,0	0/0:11,0:11:11.92:0,12,160	0/0:38,0:38:92.80:0,93,1205	1/1:19,1:20:17.95:152,18,0	0/0:20,0:20:60.14:0,60,815	0/0:6,0:6:11.99:0,12,154	./.	0/1:10,0:10:0:0,0,0	0/1:6,0:6:0.03:0,0,0	0/1:42,1:43:0.06:0,0,0	0/0:11,1:12:27:0,27,310	0/0:26,1:26:3.59:0,4,726	0/0:12,0:11:20.92:0,21,257	0/0:8,0:8:15.03:0,15,181
chr10	6828364	.	T	TA	5855.32	PASS	AB=0.956;AC=30;AF=0.536;AN=56;BaseQRankSum=-9.970;DP=485;FS=5.811;HRun=7;HaplotypeScore=49.9306;InbreedingCoeff=0.8528;MQ=66.57;MQ0=0;MQRankSum=-1.065;QD=23.42;ReadPosRankSum=0.869;VQSLOD=4.6508;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:72.11:0,72,690	1/1:0,13:13:32.97:398,33,0	0/0:14,0:10:4.22:0,4,79	0/1:8,0:7:3.52:4,0,41	1/1:2,22:24:63.13:739,63,0	0/0:18,0:18:54.09:0,54,521	0/0:9,0:9:27.02:0,27,250	1/1:6,20:26:60.16:702,60,0	0/0:17,0:17:42.07:0,42,405	1/1:1,15:16:45.08:513,45,0	1/1:1,13:14:33.01:368,33,0	1/1:0,15:15:42.13:507,42,0	1/1:0,11:11:24.07:290,24,0	1/1:2,10:12:24.07:289,24,0	1/1:1,23:24:48.15:577,48,0	0/0:11,0:11:33.05:0,33,318	0/0:37,1:38:99:0,104,983	1/1:2,18:20:48.15:579,48,0	0/0:25,0:25:60.09:0,60,579	0/0:13,0:13:39.01:0,39,366	1/1:3,11:14:23.94:289,24,0	1/1:1,5:6:15.05:181,15,0	1/1:1,10:11:18.06:217,18,0	1/1:0,5:5:15.05:181,15,0	0/0:29,0:29:74.99:0,75,691	0/1:28,3:31:21.42:21,0,648	0/0:20,0:19:57.04:0,57,535	0/0:14,0:14:36.06:0,36,347
chr10	6828771	.	CT	C	174.68	PASS	AB=0.900;AC=3;AF=0.056;AN=54;BaseQRankSum=1.052;DP=363;FS=31.660;HRun=8;HaplotypeScore=45.7311;InbreedingCoeff=0.4821;MQ=41.36;MQ0=52;MQRankSum=-3.860;QD=3.97;ReadPosRankSum=1.340;VQSLOD=-0.6119;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,12:12:24.04:232,24,0	0/0:9,0:7:8.79:0,9,53	0/0:4,0:2:0:0,0,0	./.	0/0:12,0:11:11.94:0,12,90	0/0:14,1:13:9.91:0,10,111	0/0:14,0:12:27.04:0,27,309	0/0:25,0:16:17.89:0,18,134	0/0:9,0:6:14.79:0,15,141	0/0:13,0:10:20.64:0,21,142	0/0:13,0:12:26.75:0,27,199	0/0:8,0:8:17.75:0,18,120	0/0:8,0:6:14.62:0,15,93	0/0:13,0:9:12.29:0,12,80	0/0:10,0:8:13.38:0,13,83	0/0:7,0:5:8.38:0,8,69	0/1:24,3:21:46.99:47,0,306	0/0:13,0:10:17.71:0,18,113	0/0:13,0:11:21.54:0,22,255	0/0:17,0:17:36.10:0,36,423	0/0:9,0:6:11.67:0,12,72	0/0:6,0:4:8.82:0,9,57	0/0:14,0:13:20.81:0,21,152	0/0:15,0:11:8.73:0,9,51	0/0:17,0:16:15.95:0,16,157	0/0:18,0:14:21.03:0,21,229	0/0:16,0:15:31.43:0,31,304	0/0:16,0:12:27.04:0,27,291
chr10	6828970	.	T	TA	1937.21	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-7.210;DP=585;FS=24.455;HRun=8;HaplotypeScore=71.1967;InbreedingCoeff=0.9869;MQ=69.82;MQ0=0;MQRankSum=-1.983;QD=26.54;ReadPosRankSum=1.644;VQSLOD=2.2124;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:88.20:0,88,811	0/0:13,0:13:29.93:0,30,264	0/0:14,0:15:25.22:0,25,250	0/0:9,0:8:11.82:0,12,78	0/0:19,0:19:42.02:0,42,384	0/0:19,0:19:50.51:0,51,449	0/0:22,0:22:57:0,57,517	0/0:25,0:25:56.96:0,57,510	0/0:18,0:18:54.03:0,54,494	0/0:36,0:36:99:0,99,902	0/0:26,0:26:54.02:0,54,494	0/0:28,0:28:81.04:0,81,741	0/0:16,0:16:45.02:0,45,412	0/0:10,0:10:26.99:0,27,239	0/0:27,0:27:81.04:0,81,741	0/0:24,0:23:57.02:0,57,522	0/0:24,0:24:66.02:0,66,599	0/0:26,0:26:72.04:0,72,659	0/0:21,0:21:51.01:0,51,462	0/0:24,0:24:57.02:0,57,522	0/0:12,0:12:29.98:0,30,264	0/0:15,0:15:39.02:0,39,356	0/0:19,0:19:48:0,48,435	0/0:10,0:10:27.01:0,27,247	0/0:18,0:18:51.02:0,51,463	1/1:5,17:22:48.13:542,48,0	1/1:1,29:30:81.07:915,81,0	1/1:1,19:20:54.16:623,54,0
chr10	6829565	.	GT	G	2507.86	PASS	AB=0.942;AC=44;AF=0.786;AN=56;BaseQRankSum=3.067;DP=409;FS=4.175;HRun=1;HaplotypeScore=59.1667;InbreedingCoeff=0.2160;MQ=85.76;MQ0=0;MQRankSum=-6.496;QD=6.74;ReadPosRankSum=4.389;VQSLOD=0.9948;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:45,0:45:8.54:141,9,0	1/1:3,0:3:6:52,6,0	0/0:16,0:16:48.10:0,48,560	0/0:20,1:21:43.07:0,43,560	0/1:1,7:8:0:0,0,0	1/1:20,0:20:15.64:78,16,0	0/1:26,0:26:25.36:57,0,25	1/1:9,0:9:8.97:73,9,0	0/1:18,0:18:1.84:66,0,2	1/1:0,8:8:17.86:129,18,0	1/1:8,0:8:16.17:123,16,0	1/1:5,0:5:11.97:99,12,0	1/1:9,0:9:23.98:204,24,0	1/1:9,0:9:14.99:128,15,0	1/1:10,0:10:29.05:247,29,0	0/1:18,0:18:39.26:52,0,39	0/1:38,0:38:82.75:83,0,90	1/1:11,0:11:21.98:173,22,0	0/1:18,0:18:13.25:31,0,13	0/1:8,0:8:7.06:13,0,7	1/1:15,1:16:20.56:162,21,0	1/1:11,0:11:10.63:149,11,0	1/1:6,0:6:17.95:147,18,0	1/1:15,0:15:29.95:252,30,0	1/1:16,0:16:20.62:58,21,0	0/1:13,0:13:9.95:29,0,10	1/1:17,0:17:14.76:101,15,0	1/1:7,0:7:6.96:19,7,0
chr10	6829566	.	TG	T	5484.21	PASS	AB=1.000;AC=32;AF=0.593;AN=54;BaseQRankSum=-3.850;DP=401;FS=7.500;HRun=8;HaplotypeScore=48.4426;InbreedingCoeff=0.7189;MQ=86.24;MQ0=0;MQRankSum=-6.091;QD=19.59;ReadPosRankSum=8.070;VQSLOD=3.7650;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,40:44:99:955,99,0	0/0:3,0:3:3:0,3,25	0/0:16,0:16:39.12:0,39,461	0/0:21,0:21:46.84:0,47,501	./.	1/1:1,19:20:57.09:550,57,0	1/1:3,22:25:57.09:550,57,0	0/0:9,0:9:5.55:0,6,51	1/1:2,16:18:45.07:434,45,0	1/1:8,0:8:2.10:5,2,0	0/0:6,0:6:4.72:0,5,30	1/1:4,0:4:0.77:2,1,0	0/0:9,0:9:3.94:0,4,27	0/1:8,0:8:0.33:0,0,1	0/0:10,0:10:2.51:0,3,7	1/1:3,15:18:42.07:405,42,0	1/1:7,31:38:81.13:782,81,0	0/0:12,0:12:4.86:0,5,34	1/1:2,16:18:48.05:457,48,0	1/1:1,7:8:15.02:145,15,0	0/0:17,0:17:8.95:0,9,64	0/0:10,0:10:6.48:0,6,58	1/1:6,0:6:4.09:12,4,0	0/1:14,0:14:0.01:0,0,0	1/1:1,15:16:36.06:348,36,0	1/1:2,11:13:33.05:318,33,0	1/1:1,14:15:42.07:405,42,0	1/1:0,7:7:12.02:116,12,0
chr10	6829874	.	ACACACACACACACACACACACACGCGCGCGCGCG	A	2743.96	PASS	AB=1.000;AC=20;AF=0.400;AN=50;BaseQRankSum=4.048;DP=452;FS=0.811;HRun=0;HaplotypeScore=220.0266;InbreedingCoeff=-0.0068;MQ=42.19;MQ0=30;MQRankSum=-2.301;QD=11.25;ReadPosRankSum=0.325;VQSLOD=2.5787;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:47,0:44:63.43:63,0,116	1/1:7,0:6:2.64:173,3,0	0/0:2,0:1:3.01:0,3,37	0/0:5,0:1:0:0,0,0	./.	0/0:20,0:17:5.82:0,6,97	0/0:19,0:18:6.49:0,6,143	0/1:14,0:13:99:147,0,131	0/0:20,0:20:7.31:0,7,87	0/1:11,0:9:99:182,0,109	./.	1/1:19,0:16:5.50:230,6,0	0/1:12,0:11:15.73:213,0,16	1/1:15,0:15:3.01:223,3,0	0/1:15,0:13:80.23:338,0,80	0/1:7,0:7:32.15:32,0,109	0/0:31,0:31:4.70:0,5,205	0/1:26,0:25:99:965,0,196	0/0:9,0:7:21.07:0,21,414	1/1:13,0:13:0.47:1,0,0	0/0:20,0:15:3.77:0,4,40	./.	1/1:12,0:12:3.01:48,3,0	1/1:22,0:21:2.97:223,3,0	0/0:14,0:14:3.22:0,3,13	0/1:24,0:23:48.22:48,0,804	0/0:16,0:14:8.46:0,8,132	0/0:12,0:10:9.78:0,10,158
chr10	6829896	.	ACGCGCGCGCGCG	A	3839.39	PASS	AB=0.820;AC=38;AF=0.905;AN=42;BaseQRankSum=1.933;DP=366;FS=3.375;HRun=0;HaplotypeScore=108.0763;InbreedingCoeff=-0.0677;MQ=42.96;MQ0=29;MQRankSum=-2.004;QD=12.93;ReadPosRankSum=3.359;VQSLOD=2.0835;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:39,0:35:5.18:79,5,0	1/1:8,0:7:3.01:94,3,0	./.	./.	./.	1/1:19,0:16:6.02:119,6,0	./.	1/1:7,7:13:17.51:428,18,0	1/1:15,0:15:12.03:235,12,0	1/1:2,6:6:15.52:494,16,0	./.	1/1:16,0:13:4.78:98,5,0	1/1:8,0:7:3.48:95,3,0	1/1:13,0:13:3.01:94,3,0	1/1:10,0:8:6.02:188,6,0	1/1:6,0:6:6.49:116,6,0	1/1:25,0:25:10.28:185,10,0	1/1:19,1:19:21.07:686,21,0	0/1:6,0:10:17.65:104,0,18	./.	0/0:8,6:9:0:0,0,0	./.	1/1:8,0:10:3.01:48,3,0	1/1:16,0:15:2.97:94,3,0	1/1:13,0:14:6.02:102,6,0	0/1:19,1:19:88.14:410,0,88	1/1:14,0:12:3.01:56,3,0	1/1:11,0:9:6.02:115,6,0
chr10	6831396	.	GCT	G	135.41	PASS	AB=1.000;AC=19;AF=0.413;AN=46;BaseQRankSum=-2.084;DP=297;FS=1.918;HRun=0;HaplotypeScore=50.7195;InbreedingCoeff=0.3283;MQ=66.31;MQ0=18;MQRankSum=0.427;QD=1.06;ReadPosRankSum=2.134;VQSLOD=1.2452;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:24:0.05:0,0,1	./.	./.	0/0:21,0:12:0:0,0,0	1/1:5,1:6:3.01:33,3,0	0/0:7,0:7:2.97:0,3,20	0/0:16,0:14:8.94:0,9,73	0/0:16,0:16:2.10:0,2,5	0/0:14,0:14:2.65:0,3,19	0/1:11,0:10:0:0,0,0	./.	1/1:11,0:11:2.96:19,3,0	1/1:4,0:4:2.98:22,3,0	1/1:10,0:8:0.39:1,0,0	1/1:4,5:8:3.01:33,3,0	0/0:5,0:4:2.96:0,3,19	0/0:17,0:15:8.71:0,9,64	1/1:11,4:14:3.01:33,3,0	./.	0/0:3,0:3:2.98:0,3,21	0/0:12,0:12:0:0,0,0	1/1:6,0:6:0.47:1,0,0	0/0:6,0:6:3:0,3,29	1/1:22,2:22:9.02:98,9,0	0/1:5,0:4:10.78:11,0,36	0/0:13,0:13:0.89:0,1,3	0/0:6,0:6:2.67:0,3,16	./.
chr10	6831589	.	CA	C	10411.91	PASS	AB=0.854;AC=54;AF=0.964;AN=56;BaseQRankSum=-6.004;DP=310;FS=4.211;HRun=1;HaplotypeScore=46.7356;InbreedingCoeff=-0.0446;MQ=83.19;MQ0=0;MQRankSum=-5.259;QD=33.59;ReadPosRankSum=2.874;VQSLOD=4.5141;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,20:20:53.82:754,54,0	1/1:1,3:4:9.03:126,9,0	0/1:14,2:14:73.37:73,0,161	0/1:20,6:20:99:196,0,122	1/1:0,15:15:36.12:503,36,0	1/1:0,5:5:15.05:210,15,0	1/1:0,16:16:45.15:629,45,0	1/1:0,7:7:21.06:277,21,0	1/1:0,10:10:27.09:377,27,0	1/1:0,11:11:33.08:427,33,0	1/1:1,7:8:18.06:251,18,0	1/1:0,9:9:27.09:371,27,0	1/1:0,5:5:12.04:168,12,0	1/1:0,12:12:36.12:503,36,0	1/1:0,5:5:15.05:210,15,0	1/1:0,11:11:30.10:414,30,0	1/1:0,16:16:42.14:587,42,0	1/1:0,17:17:45.15:618,45,0	1/1:0,8:8:24.08:335,24,0	1/1:0,9:9:24.08:335,24,0	1/1:0,11:11:33.11:462,33,0	1/1:0,10:10:27.09:370,27,0	1/1:0,13:13:39.13:544,39,0	1/1:0,12:12:24.08:335,24,0	1/1:0,9:9:27.09:377,27,0	1/1:0,13:13:36.12:498,36,0	1/1:0,8:8:24.08:336,24,0	1/1:0,3:3:9.03:126,9,0
chr10	6831731	.	C	CA	920.39	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=-5.742;DP=504;FS=11.372;HRun=7;HaplotypeScore=48.4419;InbreedingCoeff=0.7098;MQ=84.84;MQ0=0;MQRankSum=0.274;QD=15.87;ReadPosRankSum=0.154;VQSLOD=2.0600;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,36:40:84.26:1015,84,0	0/0:3,0:3:9.01:0,9,87	0/0:14,0:14:18:0,18,163	0/1:17,0:17:1.45:1,0,166	0/0:16,0:16:39.05:0,39,377	0/0:20,0:20:54.08:0,54,521	0/0:15,0:15:42.05:0,42,399	0/0:28,0:28:57.08:0,57,550	0/0:21,0:20:54.09:0,54,521	0/0:19,0:19:48.07:0,48,463	0/0:11,0:11:27.04:0,27,261	0/0:15,0:15:42.07:0,42,406	0/0:17,0:17:42.06:0,42,405	0/0:12,0:12:36.06:0,36,348	0/0:16,0:16:48.08:0,48,464	0/0:23,0:23:63.09:0,63,608	0/0:28,0:28:75.12:0,75,724	0/0:15,0:15:36.01:0,36,338	0/0:21,0:21:54.06:0,54,516	0/0:16,0:16:30.03:0,30,290	0/0:34,0:34:90.14:0,90,869	0/0:10,0:10:27.04:0,27,261	0/0:13,0:13:33.02:0,33,307	0/0:29,0:29:84.14:0,84,811	0/0:6,0:6:15.01:0,15,139	0/0:23,0:23:60.09:0,60,579	0/0:14,0:14:42.07:0,42,406	0/0:7,0:7:18.03:0,18,174
chr10	6832723	.	C	CTGGCTTTGCTATGCTAACACGGAATTCTCCG	111123.04	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-2.313;DP=740;FS=10.600;HRun=0;HaplotypeScore=423.9917;InbreedingCoeff=0.9338;MQ=84.69;MQ0=0;MQRankSum=-12.141;QD=165.61;ReadPosRankSum=6.815;VQSLOD=3.8925;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:25:51.15:4211,51,0	1/1:10,3:28:40.38:3654,40,0	0/0:36,0:36:74.82:0,75,3221	0/0:33,0:33:80.86:0,81,3160	1/1:17,1:36:54.19:3181,54,0	1/1:11,4:34:36.12:4259,36,0	1/1:33,0:33:93.30:7450,93,0	1/1:32,0:32:90.29:5111,90,0	1/1:29,0:33:93.32:7381,93,0	1/1:25,1:38:93.21:8924,93,0	1/1:14,2:28:45.15:3401,45,0	1/1:16,1:29:39.13:3088,39,0	1/1:7,1:12:24.08:2443,24,0	1/1:9,2:16:30.10:3091,30,0	1/1:12,1:21:39.13:3645,39,0	1/1:17,1:33:48.16:5139,48,0	1/1:11,2:27:36.12:4787,36,0	1/1:2,1:8:6.02:609,6,0	1/1:9,2:23:63.09:4258,63,0	1/1:13,3:39:54.19:5605,54,0	1/1:9,0:11:30.10:1276,30,0	1/1:12,3:33:36.12:3720,36,0	1/1:15,2:32:42.14:3576,42,0	1/1:6,1:15:18.06:1883,18,0	1/1:5,1:12:15.05:1904,15,0	1/1:21,1:39:99:9985,108,0	1/1:23,1:26:72.25:7052,72,0	1/1:8,0:8:21.07:1491,21,0
chr10	6832829	.	A	ATTGGAAGCATC	37850.15	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-14.382;DP=524;FS=38.156;HRun=0;HaplotypeScore=159.4256;InbreedingCoeff=0.9824;MQ=76.58;MQ0=0;MQRankSum=-14.402;QD=119.78;ReadPosRankSum=-0.928;VQSLOD=2.9737;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,2:6:15.05:564,15,0	1/1:1,5:8:18.06:999,18,0	0/0:20,0:20:51.16:0,51,1660	0/0:14,0:14:39.13:0,39,1253	1/1:6,20:31:78.27:3764,78,0	0/0:27,0:27:69.03:0,69,2350	0/0:27,0:27:72.22:0,72,2216	1/1:11,10:25:72.18:3334,72,0	0/0:23,0:23:60.02:0,60,2030	1/1:7,16:23:69.24:3808,69,0	1/1:6,17:26:69.24:3507,69,0	1/1:4,8:15:33.11:1768,33,0	1/1:6,11:19:48.16:2384,48,0	1/1:5,3:12:14.92:571,15,0	1/1:9,8:24:45.15:2071,45,0	0/0:26,0:26:72.06:0,72,2484	0/0:18,0:18:48.11:0,48,1617	1/1:5,3:10:21.07:1048,21,0	0/0:13,0:13:36.12:0,36,1055	0/0:20,0:20:57.18:0,57,1870	1/1:5,2:9:15.05:816,15,0	1/1:4,19:26:69.24:3687,69,0	1/1:7,8:15:39.13:1753,39,0	1/1:6,0:6:9.03:239,9,0	0/0:20,0:20:57.17:0,57,1869	1/1:6,10:17:48.16:2613,48,0	1/1:7,12:29:60.68:2867,61,0	1/1:3,10:15:39.13:2057,39,0
chr10	6833263	.	C	CA	1642.10	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-7.498;DP=505;FS=2.081;HRun=1;HaplotypeScore=55.1485;InbreedingCoeff=0.9824;MQ=90.56;MQ0=0;MQRankSum=-0.821;QD=35.70;ReadPosRankSum=1.637;VQSLOD=3.7306;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:84.25:0,84,1057	0/0:4,0:4:12.04:0,12,156	0/0:20,0:20:56.41:0,56,691	0/0:31,0:31:84.11:0,84,1017	0/0:15,0:15:39.09:0,39,474	0/0:11,0:11:27.09:0,27,350	0/0:14,0:14:39.07:0,39,472	0/0:32,0:32:84.24:0,84,1060	0/0:15,0:15:45.13:0,45,569	0/0:16,0:16:48.13:0,48,606	0/0:17,0:17:48.16:0,48,623	0/0:13,0:13:39.11:0,39,490	0/0:13,0:13:39.13:0,39,504	0/0:10,0:10:30.10:0,30,389	0/0:12,0:12:33.09:0,33,414	0/0:16,0:16:48.14:0,48,609	0/0:24,0:24:60.20:0,60,778	0/0:18,0:18:54.17:0,54,694	0/0:22,0:22:60.19:0,60,777	0/0:22,0:22:66.20:0,66,841	0/0:37,0:37:99:0,108,1401	0/0:13,0:13:36.12:0,36,467	0/0:15,0:15:45.15:0,45,583	0/0:25,0:24:69.19:0,69,873	0/0:12,0:12:36.10:0,36,453	1/1:2,22:24:30.29:928,30,0	1/1:1,16:17:42.14:630,42,0	1/1:0,5:5:15.05:225,15,0
chr10	6833416	.	A	AAAC	2093.17	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=0.308;DP=487;FS=3.807;HRun=0;HaplotypeScore=94.2497;InbreedingCoeff=0.8581;MQ=45.51;MQ0=14;MQRankSum=3.546;QD=14.85;ReadPosRankSum=0.813;VQSLOD=3.4212;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:27:30.84:0,31,283	0/0:11,0:11:17.29:0,17,107	0/0:21,0:4:7.93:0,8,43	0/0:14,0:5:1.59:0,2,45	0/0:35,0:33:60.41:0,60,388	1/1:5,8:15:8.66:118,9,0	1/1:5,7:13:14.91:235,15,0	0/0:40,0:39:85.46:0,85,625	1/1:8,1:9:19.85:205,20,0	0/0:21,0:20:47.74:0,48,326	0/0:34,0:34:43.43:0,43,378	0/0:10,0:9:18.11:0,18,113	0/0:6,0:6:7.65:0,8,43	0/0:11,0:11:19.60:0,20,128	0/0:8,0:8:14.80:0,15,97	1/1:3,10:15:14.90:204,15,0	1/1:9,13:22:24.06:358,24,0	0/0:16,0:14:18.60:0,19,113	1/1:8,14:23:3.45:606,3,0	1/1:4,2:21:31.59:206,32,0	0/0:4,0:3:8.97:0,9,72	0/0:6,0:6:14.85:0,15,103	0/0:21,0:21:33.05:0,33,265	0/0:6,0:6:5.73:0,6,35	1/1:16,1:16:36.15:355,36,0	0/0:25,0:25:40.74:0,41,351	0/0:18,0:18:28.38:0,28,203	0/0:11,0:11:20.91:0,21,186
chr10	6833509	.	A	ATG	1940.25	PASS	AB=0.571;AC=5;AF=0.089;AN=56;BaseQRankSum=-4.860;DP=618;FS=8.608;HRun=0;HaplotypeScore=95.0035;InbreedingCoeff=0.7650;MQ=62.79;MQ0=4;MQRankSum=0.506;QD=26.22;ReadPosRankSum=2.741;VQSLOD=4.5491;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:58.87:0,59,711	0/0:15,0:15:30.08:0,30,356	0/0:22,0:17:38.91:0,39,407	0/0:14,0:8:9.86:0,10,95	0/0:31,0:31:69.20:0,69,836	0/0:22,0:22:42.12:0,42,504	0/0:16,0:16:48.08:0,48,560	0/0:38,0:38:75.17:0,75,887	0/0:14,0:14:30.02:0,30,325	0/0:19,0:19:45.13:0,45,536	0/0:27,0:27:60:0,60,691	0/0:16,0:16:27.08:0,27,332	0/0:15,0:15:39.09:0,39,454	0/0:17,0:17:39.11:0,39,466	0/0:19,0:19:51.15:0,51,615	0/0:12,0:12:27.07:0,27,320	0/0:35,0:35:93.25:0,93,1115	0/0:21,0:21:36.11:0,36,443	0/0:23,0:22:54.15:0,54,643	0/0:36,0:37:77.92:0,78,907	0/0:15,0:15:39.03:0,39,422	0/0:14,0:15:29.91:0,30,334	0/0:19,0:19:48.11:0,48,553	0/0:19,0:19:53.74:0,54,650	0/0:31,0:31:69.19:0,69,824	0/1:6,18:23:19.50:654,0,20	1/1:5,23:29:57.19:927,57,0	1/1:0,21:21:30.10:489,30,0
chr10	6833937	.	G	GAAACA	22383	PASS	AB=0.944;AC=47;AF=0.839;AN=56;BaseQRankSum=-8.566;DP=686;FS=9.937;HRun=0;HaplotypeScore=113.9701;InbreedingCoeff=0.8037;MQ=66.59;MQ0=4;MQRankSum=-2.551;QD=38.86;ReadPosRankSum=1.827;VQSLOD=4.5881;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:21,34:57:81.28:2283,81,0	1/1:6,8:15:21.07:599,21,0	0/0:24,0:16:9.03:0,9,149	0/0:44,0:34:17.80:0,18,295	1/1:8,13:21:36.12:1025,36,0	1/1:8,18:27:51.18:1444,51,0	1/1:8,8:17:15.05:426,15,0	1/1:12,2:16:15.03:318,15,0	1/1:12,15:27:24.08:683,24,0	1/1:5,11:18:36.12:962,36,0	1/1:10,11:23:36.12:905,36,0	1/1:5,17:23:39.09:1037,39,0	1/1:8,9:18:30.10:809,30,0	1/1:6,10:17:18.06:507,18,0	1/1:7,10:18:27.09:769,27,0	1/1:7,18:24:48.16:1367,48,0	1/1:16,26:42:63.22:1796,63,0	1/1:7,11:19:27.09:770,27,0	1/1:18,4:18:15.03:352,15,0	1/1:9,15:24:39.13:1110,39,0	1/1:11,9:21:27.09:736,27,0	1/1:10,9:18:27.09:768,27,0	1/1:11,13:26:33.11:940,33,0	1/1:15,25:42:60.16:1642,60,0	1/1:4,15:20:39.13:1085,39,0	0/1:16,1:17:49.27:49,0,443	0/0:39,0:39:75.24:0,75,1329	0/0:3,0:3:6.02:0,6,102
chr10	6834158	.	T	TA	9162.35	PASS	AB=0.598;AC=49;AF=0.875;AN=56;BaseQRankSum=-3.159;DP=425;FS=1.963;HRun=10;HaplotypeScore=67.6187;InbreedingCoeff=0.5388;MQ=59.87;MQ0=4;MQRankSum=-2.453;QD=22.74;ReadPosRankSum=1.760;VQSLOD=5.8334;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,24:30:59.47:602,59,0	1/1:1,5:6:18:180,18,0	0/0:7,0:6:8.97:0,9,73	0/0:13,1:10:12.16:0,12,73	1/1:2,14:16:36.05:372,36,0	1/1:2,14:16:36.09:384,36,0	1/1:2,8:10:24.06:256,24,0	1/1:12,16:25:7.69:476,8,0	1/1:2,10:13:25.96:314,26,0	0/1:9,14:22:1.17:400,0,1	0/1:2,7:9:0.58:200,0,1	1/1:0,13:13:30.08:320,30,0	1/1:3,8:11:24.03:245,24,0	1/1:2,4:6:15.04:158,15,0	1/1:1,9:10:18.39:277,18,0	1/1:1,13:14:30.07:316,30,0	1/1:7,25:32:13.70:746,14,0	1/1:5,10:14:33.06:341,33,0	1/1:5,10:15:11.44:323,11,0	1/1:4,14:18:36.09:384,36,0	0/1:4,7:10:6.13:142,0,6	1/1:1,6:7:18.05:192,18,0	1/1:3,10:13:26.84:287,27,0	1/1:3,3:6:8.43:95,8,0	1/1:2,16:18:45.11:480,45,0	1/1:6,20:26:66.13:685,66,0	1/1:4,19:23:63.10:645,63,0	1/1:3,10:13:34.61:345,35,0
chr10	6834192	.	AAAAC	A	2738.03	PASS	AB=1.000;AC=8;AF=0.143;AN=56;BaseQRankSum=6.717;DP=485;FS=0.527;HRun=0;HaplotypeScore=114.8013;InbreedingCoeff=0.7478;MQ=67.21;MQ0=0;MQRankSum=-6.188;QD=25.59;ReadPosRankSum=2.096;VQSLOD=3.4976;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:21.77:0,22,535	0/0:11,0:11:33.10:0,33,758	0/1:21,0:18:2.71:3,0,614	0/1:12,0:9:24.46:24,0,119	0/0:16,0:16:39.04:0,39,826	0/0:19,0:18:54.12:0,54,1229	0/0:10,0:10:29.75:0,30,597	0/0:22,0:22:42.14:0,42,919	0/0:12,0:12:33.04:0,33,720	0/0:21,0:21:53.21:0,53,1253	0/0:10,0:10:24.08:0,24,584	0/0:18,0:18:39.13:0,39,915	0/0:13,0:13:29.82:0,30,578	0/0:10,0:10:27.09:0,27,592	0/0:14,0:14:36.12:0,36,880	0/0:14,0:14:27.08:0,27,612	0/0:37,0:37:87.25:0,87,1945	0/0:18,0:18:42.10:0,42,964	0/0:19,0:18:36.02:0,36,776	0/0:20,0:20:48.16:0,48,1163	0/0:11,0:11:30.08:0,30,654	0/0:11,0:11:33.11:0,33,804	0/0:18,0:18:51.16:0,51,1189	0/0:10,0:10:27.09:0,27,623	0/0:19,0:19:45.10:0,45,920	1/1:11,23:34:75.19:1151,75,0	1/1:5,17:22:57.19:954,57,0	1/1:0,18:18:45.15:755,45,0
chr10	6836222	.	CACACACACACACACACACACACACACA	C	19033.59	PASS	AB=0.603;AC=46;AF=0.821;AN=56;BaseQRankSum=8.892;DP=374;FS=24.286;HRun=0;HaplotypeScore=198.6047;InbreedingCoeff=0.3313;MQ=50.98;MQ0=27;MQRankSum=-5.651;QD=62.20;ReadPosRankSum=6.025;VQSLOD=2.5511;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:20:37.47:0,37,2376	1/1:0,2:2:3.01:218,3,0	0/0:27,0:21:63.21:0,63,1396	0/0:18,0:8:24.08:0,24,634	1/1:1,12:15:15.01:894,15,0	1/1:0,23:23:30.10:2185,30,0	1/1:1,11:11:3.01:219,3,0	0/1:8,0:16:88.60:567,0,89	1/1:0,14:15:18.06:1128,18,0	1/1:2,15:17:38.81:1816,39,0	1/1:1,5:8:12.93:873,13,0	1/1:1,9:10:17.64:1309,18,0	1/1:0,10:11:27.09:1785,27,0	1/1:0,5:8:5.52:236,6,0	1/1:1,10:11:11.69:873,12,0	1/1:0,9:9:12.04:875,12,0	0/1:1,7:8:72.64:403,0,73	0/1:4,2:6:99:211,0,268	1/1:0,9:9:27.07:908,27,0	1/1:1,3:7:12.04:690,12,0	1/1:2,0:12:3.48:36,3,0	0/1:1,10:14:13.84:244,0,14	1/1:2,7:10:6.02:437,6,0	1/1:2,7:10:2.52:218,3,0	1/1:0,8:8:6.02:437,6,0	1/1:2,15:16:33.58:1167,34,0	1/1:1,20:20:11.37:870,11,0	1/1:0,5:5:6.02:435,6,0
chr10	6836238	.	C	CT	478.26	PASS	AB=0.968;AC=9;AF=0.161;AN=56;BaseQRankSum=-2.878;DP=368;FS=0.850;HRun=0;HaplotypeScore=156.8995;InbreedingCoeff=0.3793;MQ=36.87;MQ0=36;MQRankSum=1.195;QD=5.90;ReadPosRankSum=-1.741;VQSLOD=3.1690;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:23:41.71:0,42,517	0/0:2,0:2:2.04:0,2,6	0/0:25,0:12:33.11:0,33,455	0/0:23,0:9:24.08:0,24,327	0/0:13,2:14:8.48:0,8,25	0/0:23,0:23:22.20:0,22,70	0/0:13,0:11:2.22:0,2,7	1/1:4,5:7:4.03:227,4,0	0/0:18,0:15:11.10:0,11,35	0/1:17,2:17:5.63:220,0,6	0/0:5,2:7:8.70:0,9,25	0/0:11,0:10:14.51:0,15,43	0/0:11,1:11:17.03:0,17,51	0/0:5,3:8:2.04:0,2,6	0/0:10,1:11:8.88:0,9,26	0/0:10,0:9:8.88:0,9,28	0/1:8,0:8:2.27:2,0,4	0/0:5,0:5:8.03:0,8,70	1/1:10,0:9:2.08:74,2,0	0/0:4,0:5:6.66:0,7,21	1/1:4,9:10:2.92:17,3,0	0/0:12,3:13:2.04:0,2,6	0/0:10,3:10:4.26:0,4,12	0/0:9,1:10:2.04:0,2,6	0/0:8,0:8:4.44:0,4,14	0/1:22,0:17:1.12:58,0,1	0/0:21,0:20:8.87:0,9,28	0/0:5,0:5:4.44:0,4,14
chr10	6836363	.	A	ATTCT	5618.17	PASS	AB=1.000;AC=33;AF=0.589;AN=56;BaseQRankSum=2.889;DP=502;FS=9.446;HRun=0;HaplotypeScore=118.0897;InbreedingCoeff=0.8634;MQ=64.44;MQ0=1;MQRankSum=-2.151;QD=19.85;ReadPosRankSum=0.962;VQSLOD=4.0816;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:84.26:0,84,1287	1/1:8,0:8:15.04:142,15,0	0/0:23,0:17:27.02:0,27,331	0/0:8,0:7:15.05:0,15,233	1/1:17,0:17:37.08:339,37,0	0/0:22,0:22:54.09:0,54,803	0/0:10,0:10:27.07:0,27,362	1/1:24,0:24:43.99:464,44,0	0/0:18,0:18:21.06:0,21,229	1/1:14,0:14:24.85:285,25,0	1/1:17,0:17:27.44:361,27,0	1/1:13,0:13:3.01:57,3,0	1/1:5,0:5:3.01:57,3,0	1/1:11,0:11:27.08:435,27,0	1/1:17,0:17:25.15:556,25,0	0/0:15,0:15:33.04:0,33,405	0/0:25,0:25:60.17:0,60,898	0/1:16,0:16:17.79:274,0,18	0/0:21,0:20:48.06:0,48,677	0/0:21,0:21:57.13:0,57,832	1/1:19,0:19:40.05:314,40,0	1/1:24,0:24:32.89:431,33,0	1/1:14,0:14:9.03:150,9,0	1/1:16,0:16:32.05:408,32,0	0/0:17,0:17:45.14:0,45,715	1/1:12,6:21:18.52:373,19,0	1/1:8,19:27:22.32:547,22,0	1/1:17,3:20:24.51:424,25,0
chr10	6836373	.	T	TCTTTCTTCCTTC	8239.54	PASS	AB=1.000;AC=24;AF=0.429;AN=56;BaseQRankSum=-9.427;DP=510;FS=0.397;HRun=0;HaplotypeScore=184.8524;InbreedingCoeff=0.5505;MQ=54.60;MQ0=1;MQRankSum=-2.005;QD=32.83;ReadPosRankSum=0.010;VQSLOD=3.9062;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:90.30:0,90,2721	1/1:7,0:7:6.80:168,7,0	0/0:15,0:9:27.08:0,27,422	0/0:6,0:5:15.05:0,15,360	1/1:19,0:19:7.30:562,7,0	0/0:22,0:23:69.07:0,69,1714	0/0:11,0:11:32.52:0,33,653	1/1:23,0:23:57.02:926,57,0	0/0:0,0:21:21.07:0,21,603	0/1:14,0:14:1.07:461,0,1	0/1:18,0:18:0.44:606,0,0	1/1:0,9:17:3.01:184,3,0	1/1:0,3:7:3.01:184,3,0	1/1:9,0:9:27.08:740,27,0	0/1:15,0:15:10.92:969,0,11	0/0:14,0:14:39.02:0,39,778	0/0:24,0:24:69.21:0,69,1925	0/1:16,0:16:99:415,0,103	0/0:20,0:19:54.08:0,54,1343	0/0:22,0:22:66.17:0,66,1802	0/1:21,0:21:36.68:494,0,37	1/1:2,21:30:38.84:1095,39,0	1/1:1,8:17:9.03:436,9,0	1/1:18,0:18:44.86:975,45,0	0/0:17,0:17:51.17:0,51,1571	0/0:23,0:23:36.67:0,37,678	0/0:28,0:28:35.53:0,36,267	0/1:19,0:19:25.74:26,0,368
chr10	6836805	.	CA	C	1114.70	PASS	AB=0.657;AC=14;AF=0.250;AN=56;BaseQRankSum=-7.108;DP=474;FS=2.327;HRun=13;HaplotypeScore=66.8971;InbreedingCoeff=0.6317;MQ=75.43;MQ0=0;MQRankSum=-1.308;QD=8.14;ReadPosRankSum=2.254;VQSLOD=2.8656;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:30:57.90:0,58,375	0/0:0,0:3:8.52:0,9,43	0/1:14,1:14:7.95:8,0,118	0/0:14,1:12:8.92:0,9,66	0/0:13,0:30:62.09:0,62,385	1/1:3,16:22:45.76:318,46,0	0/1:3,10:15:0.30:152,0,0	0/0:13,0:33:72.56:0,73,449	1/1:5,10:15:17.86:131,18,0	0/0:8,0:26:60.19:0,60,356	0/0:8,0:16:19.99:0,20,103	0/0:4,0:14:14.52:0,15,96	0/0:7,0:15:29.21:0,29,208	0/0:4,0:12:14.53:0,15,101	0/0:4,0:14:22.89:0,23,129	1/1:2,9:12:22.88:159,23,0	1/1:6,14:20:6.58:212,7,0	0/0:8,0:13:28.88:0,29,164	1/1:2,4:6:11.92:87,12,0	0/1:7,12:20:26.58:149,0,27	0/0:3,0:13:25.81:0,26,146	0/0:2,0:18:34.15:0,34,180	0/0:7,0:14:26.14:0,26,176	0/0:1,0:12:22.89:0,23,129	0/1:3,7:11:12.23:76,0,12	0/0:7,0:27:58.96:0,59,333	0/0:3,0:24:20:0,20,104	0/0:0,0:8:14.20:0,14,72
chr10	6837064	.	TA	T	2551.39	PASS	AB=0.648;AC=41;AF=0.732;AN=56;BaseQRankSum=-4.363;DP=431;FS=0.627;HRun=15;HaplotypeScore=57.1207;InbreedingCoeff=0.3159;MQ=70.07;MQ0=4;MQRankSum=1.238;QD=7.05;ReadPosRankSum=4.702;VQSLOD=2.5202;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,0:33:38.63:112,39,0	1/1:1,4:6:13.78:80,14,0	0/0:22,0:18:16.37:0,16,94	0/1:20,1:15:15.15:15,0,60	1/1:5,16:20:2.54:145,3,0	0/1:6,6:13:14.25:48,0,14	0/1:4,6:13:29.49:50,0,29	1/1:7,12:21:27.60:165,28,0	1/1:2,12:16:10.93:174,11,0	1/1:2,13:16:40.43:255,40,0	0/1:5,6:11:12.87:50,0,13	0/1:5,7:12:5.64:95,0,6	1/1:7,5:12:11.64:72,12,0	1/1:6,5:12:10.82:63,11,0	1/1:3,13:16:6.16:165,6,0	1/1:1,9:11:25.68:160,26,0	1/1:4,10:16:24.74:146,25,0	1/1:4,7:13:21.73:125,22,0	0/1:8,12:21:9.30:188,0,9	1/1:2,7:9:8.02:56,8,0	0/1:1,6:7:8.58:78,0,9	1/1:2,9:11:17.63:115,18,0	1/1:6,13:20:8.39:142,8,0	1/1:7,9:18:26.72:150,27,0	1/1:1,9:10:11.73:75,12,0	0/0:5,0:13:25.93:0,26,144	0/0:7,0:24:23.43:0,23,124	0/0:4,0:9:12.39:0,12,66
chr10	6837661	.	TA	T	1817.89	PASS	AB=0.958;AC=19;AF=0.339;AN=56;BaseQRankSum=4.608;DP=457;FS=1.438;HRun=13;HaplotypeScore=54.6055;InbreedingCoeff=0.7444;MQ=57.59;MQ0=3;MQRankSum=2.748;QD=10.89;ReadPosRankSum=3.075;VQSLOD=3.2344;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,3:30:19.27:0,19,495	0/0:10,0:10:21.03:0,21,200	0/1:12,2:6:8.35:8,0,93	0/1:4,0:2:10.68:11,0,21	0/0:30,1:31:56.22:0,56,708	1/1:0,12:13:37.83:268,38,0	1/1:1,9:10:26.84:197,27,0	0/0:27,0:27:63.06:0,63,600	1/1:0,8:10:24.96:165,25,0	0/0:21,0:21:20.54:0,21,349	0/0:25,0:25:72.06:0,72,682	0/0:9,0:8:15.02:0,15,146	0/0:6,0:6:12:0,12,109	0/0:10,0:10:24.02:0,24,227	0/0:17,0:17:41.96:0,42,382	1/1:3,15:18:35.75:263,36,0	1/1:0,24:25:73.63:531,74,0	0/0:11,0:11:30.05:0,30,291	1/1:3,13:15:35.77:261,36,0	1/1:7,13:21:5.59:195,6,0	0/0:14,0:15:36.37:0,36,336	0/0:9,0:9:21.03:0,21,200	0/0:15,0:15:39.04:0,39,369	0/0:11,0:11:21.03:0,21,204	1/1:3,7:11:16.92:115,17,0	0/0:27,0:26:7.59:0,8,18	0/1:25,0:25:3.67:4,0,9	0/0:16,0:16:4.71:0,5,13
chr10	6837673	.	AAT	A	2007.91	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=3.977;DP=471;FS=3.775;HRun=0;HaplotypeScore=64.8166;InbreedingCoeff=0.9550;MQ=62.34;MQ0=1;MQRankSum=0.326;QD=29.53;ReadPosRankSum=1.447;VQSLOD=5.0288;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:74.88:0,75,1065	0/0:9,0:9:26.92:0,27,421	0/0:14,0:9:25.20:0,25,278	0/0:5,0:3:7.16:0,7,49	0/0:33,0:33:96.14:0,96,1442	0/0:18,0:18:47.54:0,48,317	0/0:13,0:13:38.28:0,38,244	0/0:30,0:30:87.09:0,87,1266	0/0:11,0:11:18.45:0,18,141	0/0:19,0:19:53.65:0,54,817	0/0:26,0:26:78.21:0,78,1267	0/0:10,0:9:26.99:0,27,379	0/0:5,0:5:12.04:0,12,196	0/0:12,0:12:30.05:0,30,464	0/0:19,0:19:51.06:0,51,740	0/0:15,0:15:35.27:0,35,214	0/0:26,0:26:71.02:0,71,449	0/0:12,0:12:33.03:0,33,497	0/0:15,0:15:41.24:0,41,257	0/0:16,0:16:41.83:0,42,341	0/0:19,0:19:49.02:0,49,711	0/0:10,0:10:27.05:0,27,391	0/0:15,0:15:45.12:0,45,713	0/0:11,0:11:27.06:0,27,428	0/0:12,0:12:28.46:0,28,205	1/1:4,28:31:62.34:948,62,0	1/1:1,24:25:62.88:805,63,0	1/1:0,11:11:30.10:398,30,0
chr10	6837790	.	CTGTTTGTT	C	13843.81	PASS	AB=0.663;AC=50;AF=0.893;AN=56;BaseQRankSum=5.550;DP=483;FS=4.250;HRun=0;HaplotypeScore=131.7392;InbreedingCoeff=0.5272;MQ=59.51;MQ0=0;MQRankSum=-6.436;QD=31.97;ReadPosRankSum=4.687;VQSLOD=4.3682;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:9,12:21:14.78:500,0,15	1/1:4,7:10:18.06:467,18,0	0/0:22,0:21:16.36:0,16,804	0/0:28,0:25:39.13:0,39,1435	1/1:6,10:16:18.06:467,18,0	1/1:6,12:18:27.09:701,27,0	0/1:11,9:20:18.79:446,0,19	1/1:20,10:30:30.02:534,30,0	1/1:3,12:14:27.09:661,27,0	1/1:3,13:16:39.09:778,39,0	1/1:6,13:19:24.08:623,24,0	1/1:2,10:10:18.06:467,18,0	1/1:11,7:18:15.05:389,15,0	1/1:3,5:7:12.04:311,12,0	1/1:2,12:14:21.07:525,21,0	1/1:6,10:16:27.09:701,27,0	1/1:11,8:19:18.06:467,18,0	1/1:3,9:12:18.01:467,18,0	1/1:11,2:13:9.03:226,9,0	1/1:5,18:23:33.11:856,33,0	1/1:11,10:21:6.07:229,6,0	1/1:5,14:19:24.08:623,24,0	1/1:7,10:17:15.94:391,16,0	1/1:4,11:15:6.02:134,6,0	1/1:2,14:16:36.12:934,36,0	1/1:5,11:15:30.10:779,30,0	1/1:9,11:20:36.12:934,36,0	1/1:4,4:8:9.03:234,9,0
chr10	6837836	.	GA	G	943.08	PASS	AB=0.909;AC=7;AF=0.125;AN=56;BaseQRankSum=0.484;DP=462;FS=0.000;HRun=9;HaplotypeScore=112.6015;InbreedingCoeff=0.8650;MQ=59.93;MQ0=0;MQRankSum=-0.669;QD=17.79;ReadPosRankSum=3.361;VQSLOD=3.1096;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,1:24:53.63:0,54,588	0/0:7,0:7:21.06:0,21,242	0/0:17,0:16:29.56:0,30,306	0/0:17,0:15:20.80:0,21,254	0/0:17,0:17:45.08:0,45,495	0/0:23,0:23:51.14:0,51,579	0/0:14,0:14:35.98:0,36,371	0/0:29,0:29:70.14:0,70,789	0/0:17,0:16:39.07:0,39,435	0/0:23,0:23:57.14:0,57,639	0/0:19,0:19:42.05:0,42,450	0/0:13,0:12:36.03:0,36,380	0/0:9,0:9:21.06:0,21,242	0/0:10,0:9:27.08:0,27,311	0/0:14,0:15:29.92:0,30,326	0/0:12,0:12:27.08:0,27,311	0/0:18,0:18:48.10:0,48,539	0/0:10,0:10:24.01:0,24,250	0/1:9,1:10:0.39:0,0,250	0/0:27,0:27:72.07:0,72,775	0/0:18,0:18:26.99:0,27,273	0/0:20,0:20:39.03:0,39,413	0/0:16,0:16:33.06:0,33,358	0/0:15,0:15:33.10:0,33,380	0/0:19,0:19:42.12:0,42,484	1/1:3,16:18:50.91:446,51,0	1/1:1,21:22:63.03:576,63,0	1/1:0,2:2:6:55,6,0
chr10	6840007	.	GGTGTGTGTGTGTGTGTGTGTGT	G	3732.72	PASS	AB=0.844;AC=23;AF=0.460;AN=50;BaseQRankSum=5.079;DP=530;FS=0.000;HRun=0;HaplotypeScore=257.4025;InbreedingCoeff=0.5829;MQ=61.43;MQ0=25;MQRankSum=-3.424;QD=14.14;ReadPosRankSum=-0.605;VQSLOD=1.9088;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:24:21.07:0,21,1289	./.	./.	./.	1/1:16,11:28:15.04:691,15,0	0/0:17,0:17:24.08:0,24,1837	0/0:19,0:19:15.52:0,16,998	1/1:28,0:28:8.23:82,8,0	0/0:16,0:16:21.07:0,21,1569	0/1:15,5:17:86.51:350,0,87	0/1:12,2:14:13.02:350,0,13	1/1:10,8:16:8.74:518,9,0	1/1:5,8:12:8.70:518,9,0	1/1:19,0:20:6.02:205,6,0	1/1:13,4:17:3.01:173,3,0	0/0:9,0:10:15.02:0,15,973	0/0:16,0:18:18.06:0,18,1102	0/1:20,4:19:7.82:335,0,8	0/0:17,0:16:6.02:0,6,429	0/0:20,0:20:12.04:0,12,455	1/1:26,0:26:6.01:92,6,0	1/1:13,0:14:8.05:90,8,0	1/1:17,0:18:3.01:151,3,0	1/1:15,9:24:3.95:176,4,0	0/0:11,0:11:15.05:0,15,1077	0/0:24,0:22:25.87:0,26,1153	0/0:9,0:10:15.02:0,15,832	0/0:7,0:7:19.31:0,19,1335
chr10	6840711	.	A	AAT	8647.27	PASS	AB=0.585;AC=29;AF=0.518;AN=56;BaseQRankSum=-12.661;DP=491;FS=2.642;HRun=0;HaplotypeScore=56.5671;InbreedingCoeff=0.9018;MQ=66.44;MQ0=1;MQRankSum=-0.184;QD=36.49;ReadPosRankSum=1.879;VQSLOD=6.8700;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,1:15:30.02:289,30,0	1/1:1,7:8:21.07:348,21,0	0/0:9,0:10:20.53:0,21,177	0/0:8,0:7:2.94:0,3,18	1/1:4,15:19:39.13:635,39,0	0/0:29,0:29:72.18:0,72,878	0/0:13,0:13:36.07:0,36,436	0/1:7,16:24:18.57:741,0,19	0/0:21,0:21:57.18:0,57,718	1/1:1,18:20:60.19:967,60,0	1/1:3,16:19:45.15:748,45,0	1/1:1,13:14:36.12:597,36,0	1/1:2,11:14:33.11:548,33,0	1/1:2,5:7:15.05:249,15,0	1/1:0,15:15:33.11:549,33,0	0/0:15,0:15:39.12:0,39,492	0/0:24,0:24:60.16:0,60,740	1/1:0,11:12:30.10:498,30,0	0/0:18,0:17:42.10:0,42,504	0/0:22,0:22:66.20:0,66,822	1/1:0,13:14:36.12:598,36,0	1/1:2,15:17:39.13:647,39,0	1/1:7,13:21:36.12:586,36,0	1/1:2,16:18:39.13:648,39,0	0/0:17,0:17:48.15:0,48,606	0/0:25,0:25:69.21:0,69,860	0/0:35,0:35:87.24:0,87,1070	0/0:17,0:17:33.10:0,33,416
chr10	6841328	.	A	AG	4531.96	PASS	AB=0.762;AC=33;AF=0.589;AN=56;BaseQRankSum=-4.471;DP=375;FS=0.000;HRun=8;HaplotypeScore=63.5988;InbreedingCoeff=0.8936;MQ=66.22;MQ0=2;MQRankSum=-3.262;QD=21.68;ReadPosRankSum=-1.862;VQSLOD=4.2761;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:54:0,54,488	1/1:2,4:6:14.94:154,15,0	0/0:13,0:8:9.11:0,9,64	0/0:14,0:9:13.86:0,14,99	1/1:3,17:20:36.11:415,36,0	0/0:16,1:17:41.21:0,41,383	0/0:14,0:14:29.99:0,30,269	1/1:5,14:19:19.35:323,19,0	0/0:10,0:10:24:0,24,215	1/1:4,8:12:27.04:297,27,0	1/1:8,9:17:33.08:363,33,0	1/1:0,7:7:18.05:208,18,0	1/1:2,4:7:17.75:168,18,0	1/1:3,10:13:30.09:344,30,0	1/1:3,11:16:34.34:381,34,0	0/0:7,0:7:15.01:0,15,137	0/0:23,0:23:48.03:0,48,439	1/1:0,15:16:44.86:499,45,0	0/0:14,1:15:10.75:0,11,295	0/0:17,0:17:33:0,33,298	1/1:1,10:11:21.04:230,21,0	1/1:2,6:8:15.04:173,15,0	1/1:0,6:6:18.05:208,18,0	1/1:2,13:15:39.12:450,39,0	0/0:14,0:14:33.02:0,33,302	0/1:11,0:16:6.98:68,0,7	1/1:9,0:17:40.18:224,40,0	1/1:0,0:2:5.68:29,6,0
chr10	6841440	.	GT	G	637.22	PASS	AB=0.877;AC=12;AF=0.214;AN=56;BaseQRankSum=4.488;DP=293;FS=1.995;HRun=12;HaplotypeScore=53.4106;InbreedingCoeff=0.5003;MQ=72.94;MQ0=3;MQRankSum=0.883;QD=7.32;ReadPosRankSum=2.133;VQSLOD=2.0009;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:20:28.02:81,28,0	0/0:2,0:2:3.01:0,3,30	0/0:17,0:12:5.55:0,6,29	0/1:7,0:5:0.70:1,0,1	0/0:12,0:12:2.96:0,3,185	0/0:11,0:12:25.47:0,25,124	0/0:2,0:2:5.68:0,6,28	0/0:22,1:22:31.20:0,31,365	0/0:6,0:6:14.20:0,14,70	0/0:15,0:15:27.05:0,27,270	0/1:12,2:14:16.43:16,0,207	0/0:5,0:5:15.02:0,15,144	0/0:3,0:3:6.01:0,6,56	0/1:4,1:5:14.23:14,0,46	0/0:4,0:4:9.02:0,9,91	0/0:10,0:10:19.89:0,20,98	0/0:17,0:18:31.73:0,32,162	0/0:20,2:21:33.55:0,34,479	0/0:16,0:14:28.41:0,28,140	0/0:12,0:12:31.66:0,32,171	0/0:5,0:5:9.02:0,9,91	0/0:3,0:3:9.02:0,9,91	0/1:3,1:4:14.22:14,0,45	0/0:2,0:2:6.01:0,6,61	0/0:16,0:16:36.93:0,37,182	1/1:2,12:14:35.09:250,35,0	1/1:4,8:12:27.98:196,28,0	1/1:1,9:11:29.88:229,30,0
chr10	6841452	.	T	TTA	3944.74	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=-1.653;DP=276;FS=7.515;HRun=0;HaplotypeScore=45.7424;InbreedingCoeff=0.8154;MQ=66.98;MQ0=4;MQRankSum=-0.886;QD=29.88;ReadPosRankSum=2.837;VQSLOD=4.4286;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:44.68:0,45,335	0/0:2,0:2:6.01:0,6,65	0/0:8,0:6:2.67:0,3,12	0/1:6,0:4:12.53:25,0,13	0/0:9,0:9:24.03:0,24,284	1/1:5,7:13:33.09:520,33,0	1/1:0,3:3:8.95:122,9,0	0/0:23,0:19:47.63:0,48,519	1/1:1,5:6:15.05:262,15,0	0/0:12,0:12:33:0,33,388	0/0:11,0:11:30.01:0,30,349	0/0:6,0:6:15:0,15,183	0/0:3,0:3:5.94:0,6,59	0/0:6,0:6:11.97:0,12,116	0/0:3,0:3:8.95:0,9,80	1/1:0,8:8:21.07:367,21,0	1/1:1,18:19:36:583,36,0	0/0:30,0:28:67.38:0,67,701	1/1:4,10:13:33.09:511,33,0	1/1:5,5:11:33.04:444,33,0	0/0:4,0:4:12:0,12,138	0/0:3,0:3:9.03:0,9,119	0/0:3,0:3:8.97:0,9,84	0/0:2,0:2:6.02:0,6,79	1/1:1,13:14:42.13:694,42,0	1/1:18,0:18:40.22:217,40,0	1/1:8,0:8:20.48:82,20,0	1/1:11,0:11:27.16:118,27,0
chr10	6843068	.	CTT	C	2383.14	PASS	AB=0.674;AC=34;AF=0.607;AN=56;BaseQRankSum=-5.733;DP=364;FS=3.642;HRun=16;HaplotypeScore=54.6032;InbreedingCoeff=0.4887;MQ=61.40;MQ0=3;MQRankSum=3.297;QD=8.27;ReadPosRankSum=4.470;VQSLOD=0.4924;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:5:11.90:0,12,85	0/0:1,0:2:2.37:0,2,8	0/0:13,0:8:15.02:0,15,160	0/0:7,0:8:5.91:0,6,28	1/1:6,10:17:15.60:188,16,0	0/0:6,0:15:11.14:0,11,80	0/1:5,1:9:4.80:5,0,73	1/1:9,4:16:23.11:159,23,0	0/0:5,0:10:13.10:0,13,73	1/1:6,7:14:6.30:154,6,0	1/1:3,13:16:25.53:223,26,0	0/1:8,6:16:13.17:144,0,13	1/1:4,4:8:5.76:50,6,0	1/1:4,8:13:22.38:167,22,0	1/1:5,13:21:11.39:170,11,0	0/1:1,2:8:31.74:32,0,35	0/1:5,4:18:59.10:65,0,59	1/1:8,6:13:17.87:150,18,0	0/0:8,0:10:7.75:0,8,56	0/0:7,0:12:14.80:0,15,60	1/1:1,5:6:11.49:85,11,0	1/1:4,8:17:22.79:160,23,0	1/1:2,13:15:22.70:199,23,0	1/1:4,11:16:26.49:225,26,0	0/1:4,1:15:2.44:2,0,75	1/1:6,12:18:29.62:250,30,0	1/1:9,12:22:15.72:134,16,0	0/1:7,0:7:12.78:13,0,40
chr10	6845490	.	G	GA	5852.40	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-7.289;DP=486;FS=0.000;HRun=8;HaplotypeScore=50.0049;InbreedingCoeff=0.9951;MQ=70.48;MQ0=7;MQRankSum=-2.089;QD=26.36;ReadPosRankSum=3.020;VQSLOD=5.3522;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,23:25:51.15:586,51,0	0/0:5,0:5:15.01:0,15,137	0/0:22,0:16:29.13:0,29,227	0/0:15,0:13:20.84:0,21,184	0/0:25,1:26:37.42:0,37,597	1/1:1,17:18:42.12:485,42,0	1/1:4,10:14:24.07:277,24,0	0/0:34,0:32:87.03:0,87,792	1/1:1,13:14:36.11:415,36,0	0/0:25,0:25:69.04:0,69,632	0/0:19,0:19:48:0,48,434	0/0:9,0:9:21.01:0,21,192	0/0:15,0:15:42.01:0,42,380	0/0:10,0:10:21:0,21,188	0/0:13,0:13:26.99:0,27,247	1/1:2,13:15:30.09:346,30,0	1/1:2,26:28:69.21:796,69,0	0/0:16,0:16:39.01:0,39,356	1/1:6,15:19:42.04:468,42,0	1/1:1,9:10:27.05:298,27,0	0/0:15,0:15:42.01:0,42,379	0/0:13,0:13:36.01:0,36,329	0/0:15,0:15:39.02:0,39,357	0/0:12,0:11:30.02:0,30,275	1/1:1,14:15:39.12:450,39,0	1/1:3,12:15:36.11:416,36,0	1/1:5,29:34:81.24:935,81,0	1/1:0,12:12:33.10:381,33,0
chr10	6845751	.	G	GAA	2690.18	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=13.042;DP=547;FS=11.992;HRun=10;HaplotypeScore=81.0913;InbreedingCoeff=0.9486;MQ=54.58;MQ0=4;MQRankSum=-1.513;QD=12.57;ReadPosRankSum=-2.579;VQSLOD=0.1646;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,120,1237	0/0:6,0:5:12:0,12,115	0/0:7,0:7:17.95:0,18,162	0/0:5,0:4:12.03:0,12,122	0/0:22,0:21:47.92:0,48,459	1/1:9,10:19:24.40:283,24,0	1/1:4,11:16:11.95:129,12,0	0/0:33,0:32:65.97:0,66,664	1/1:6,10:19:24.69:286,25,0	0/0:31,0:31:69.07:0,69,692	0/0:14,0:13:33.02:0,33,317	0/0:7,0:7:12:0,12,114	0/0:11,0:11:33.07:0,33,335	0/0:17,0:17:45.06:0,45,443	0/0:13,0:15:26.76:0,27,320	1/1:6,8:14:30.95:395,31,0	1/1:7,17:26:39.28:446,39,0	0/0:17,0:17:9.76:0,10,196	1/1:20,4:27:51.74:455,52,0	1/1:7,8:15:7.75:124,8,0	0/0:23,0:22:59.98:0,60,579	0/0:23,0:22:47.24:0,47,463	0/0:22,0:22:50.83:0,51,487	0/0:29,0:29:75.12:0,75,753	1/1:5,5:12:26.79:280,27,0	1/1:19,1:26:27.87:294,28,0	1/1:7,0:22:30.47:184,30,0	1/1:7,0:10:6.65:33,7,0
chr10	6846247	.	G	GTACTTTTA	43933.60	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-6.927;DP=501;FS=3.096;HRun=0;HaplotypeScore=110.4942;InbreedingCoeff=0.9260;MQ=70.04;MQ0=1;MQRankSum=-9.978;QD=95.30;ReadPosRankSum=3.813;VQSLOD=5.2885;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,9:15:33.58:1360,34,0	1/1:5,4:11:24.08:1009,24,0	0/0:18,0:18:48.13:0,48,1042	0/0:22,0:22:62.67:0,63,1450	1/1:8,24:32:87.77:3366,88,0	1/1:6,14:21:51.18:2051,51,0	1/1:5,3:9:18.06:734,18,0	1/1:12,5:17:39.12:1218,39,0	1/1:7,16:24:63.22:2598,63,0	1/1:19,13:35:84.27:3192,84,0	1/1:5,18:26:69.24:2645,69,0	1/1:5,6:12:30.10:1024,30,0	1/1:3,8:12:33.11:1298,33,0	1/1:2,15:17:45.15:1909,45,0	1/1:3,11:15:33.11:1453,33,0	1/1:4,12:15:45.15:1984,45,0	1/1:3,8:15:30.10:1325,30,0	1/1:1,3:6:12.04:482,12,0	1/1:6,3:11:24.08:853,24,0	1/1:10,13:23:57.20:2236,57,0	1/1:1,1:5:6.02:111,6,0	1/1:5,15:24:63.22:2402,63,0	1/1:8,10:20:51.17:1938,51,0	1/1:5,7:13:24.08:867,24,0	1/1:1,17:21:54.19:2309,54,0	1/1:6,11:18:54.18:2118,54,0	1/1:3,19:26:63.22:2635,63,0	1/1:6,3:9:24.08:815,24,0
chr10	6846878	.	CAGAGAGAGAGAG	C	1323.14	PASS	AB=0.846;AC=15;AF=0.278;AN=54;BaseQRankSum=4.162;DP=517;FS=33.852;HRun=0;HaplotypeScore=160.5874;InbreedingCoeff=0.5726;MQ=76.69;MQ0=8;MQRankSum=-4.492;QD=8.94;ReadPosRankSum=0.411;VQSLOD=0.8129;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:11.80:0,12,484	0/0:4,0:4:6.02:0,6,147	0/0:37,0:27:3.01:0,3,34	0/0:35,0:19:3.01:0,3,36	./.	1/1:12,5:18:12.04:392,12,0	1/1:12,6:18:12:283,12,0	0/0:27,0:27:9.03:0,9,153	1/1:9,3:12:8.32:302,8,0	0/0:14,0:18:36.12:0,36,1044	0/0:16,0:16:14.73:0,15,306	0/0:5,0:8:11.07:0,11,138	0/0:9,0:11:6.02:0,6,75	0/1:11,0:14:22.69:23,0,183	0/0:11,0:12:18.06:0,18,420	1/1:7,3:10:3.01:103,3,0	0/1:12,0:18:28.77:38,0,29	0/0:12,0:15:18.06:0,18,612	1/1:22,0:21:12.01:168,12,0	0/1:21,0:20:0.03:0,0,0	0/0:20,0:24:30.10:0,30,700	0/0:7,0:7:6.02:0,6,96	0/0:14,0:18:24.06:0,24,437	0/0:31,0:33:27.09:0,27,568	1/1:8,4:13:6.02:180,6,0	0/0:32,0:32:58.75:0,59,2422	0/0:15,0:14:25.87:0,26,913	0/0:17,0:16:24.08:0,24,849
chr10	6847294	.	GA	G	446.48	PASS	AB=0.994;AC=29;AF=0.518;AN=56;BaseQRankSum=2.456;DP=434;FS=5.027;HRun=13;HaplotypeScore=89.7280;InbreedingCoeff=0.1900;MQ=48.14;MQ0=36;MQRankSum=0.159;QD=1.58;ReadPosRankSum=3.543;VQSLOD=-0.6388;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,4:37:14.23:0,14,732	1/1:5,0:5:1.25:3,1,0	0/0:14,0:5:5.40:0,5,25	0/0:15,0:4:10.48:0,10,74	0/1:14,0:11:1.75:2,0,7	0/1:14,0:13:55.25:68,0,55	1/1:16,0:13:15.72:92,16,0	0/1:20,0:19:0.27:0,0,42	1/1:20,0:19:14.11:71,14,0	0/0:17,0:15:2.77:0,3,17	1/1:10,0:9:4.26:11,4,0	1/1:10,0:9:1.09:4,1,0	0/1:9,0:9:2.07:2,0,5	1/1:10,0:8:4.66:11,5,0	0/1:15,0:14:4.29:4,0,30	1/1:11,0:11:17.28:96,17,0	0/1:26,0:24:39.09:119,0,39	1/1:20,0:17:9.60:25,10,0	0/1:16,0:13:17.68:18,0,43	0/1:17,0:15:28.56:29,0,38	0/0:8,0:7:1.87:0,2,21	0/1:13,1:13:2.81:12,0,3	0/1:14,0:14:5.15:5,0,11	1/1:7,0:7:5.26:13,5,0	0/1:14,0:13:23.29:23,0,23	0/0:21,0:19:27.03:0,27,126	0/0:21,0:22:31.54:0,32,171	0/0:15,0:14:17.69:0,18,120
chr10	6847304	.	AAAAC	A	2382.77	PASS	AB=0.981;AC=37;AF=0.661;AN=56;BaseQRankSum=-0.436;DP=492;FS=3.463;HRun=0;HaplotypeScore=114.0281;InbreedingCoeff=-0.0687;MQ=54.07;MQ0=36;MQRankSum=0.288;QD=5.74;ReadPosRankSum=-2.498;VQSLOD=2.0803;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:44:99:0,123,2348	1/1:7,0:7:5.83:34,6,0	0/0:15,1:7:8.47:0,8,135	0/1:21,0:8:2.44:2,0,109	1/1:24,0:22:53.49:406,53,0	0/1:14,0:14:34.72:35,0,42	0/1:17,0:14:1.14:18,0,1	1/1:20,2:21:26.32:285,26,0	1/1:18,0:17:2.10:17,2,0	1/1:19,0:20:17.78:243,18,0	1/1:10,2:11:20.53:188,21,0	1/1:8,0:8:8.73:48,9,0	1/1:14,0:14:6.93:94,7,0	1/1:8,1:8:8.82:80,9,0	0/1:12,2:14:8.63:195,0,9	0/0:14,0:14:2.37:0,2,13	0/1:28,0:29:56.54:75,0,57	1/1:19,0:16:23.08:123,23,0	0/1:21,0:18:31.22:115,0,31	0/1:15,0:15:43.57:50,0,44	0/1:6,0:5:24.81:48,0,25	0/1:10,2:12:26.16:169,0,26	1/1:15,0:15:11.27:62,11,0	1/1:11,0:11:11.61:62,12,0	0/1:15,0:15:25.11:60,0,25	0/1:24,0:23:35.47:35,0,234	0/1:23,0:23:90.90:91,0,241	0/1:12,0:11:9.67:12,0,10
chr10	6847305	.	AAAC	A	4756.22	PASS	AB=0.971;AC=47;AF=0.839;AN=56;BaseQRankSum=0.258;DP=498;FS=3.447;HRun=0;HaplotypeScore=102.3160;InbreedingCoeff=0.2210;MQ=55.23;MQ0=36;MQRankSum=-1.137;QD=10.98;ReadPosRankSum=-1.910;VQSLOD=3.9814;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:46:99:0,129,2003	1/1:1,6:7:5.96:62,6,0	0/0:16,0:7:1.22:0,1,108	0/1:23,0:10:6.67:7,0,112	1/1:22,4:23:61.01:537,61,0	1/1:15,0:14:11.19:141,11,0	1/1:17,0:14:21.81:128,22,0	1/1:10,12:21:13.68:252,14,0	1/1:18,0:17:16.98:87,17,0	1/1:5,16:20:42.96:395,43,0	1/1:5,7:11:23.20:195,23,0	1/1:2,7:8:8.94:104,9,0	1/1:9,4:13:34.35:325,34,0	1/1:4,6:8:8.99:115,9,0	1/1:13,2:14:20.79:322,21,0	1/1:14,0:14:14.04:64,14,0	1/1:31,0:29:31.38:273,31,0	1/1:3,16:16:24.08:346,24,0	1/1:21,0:18:23.07:221,23,0	1/1:17,0:15:12.69:147,13,0	0/1:5,1:5:38.16:86,0,38	1/1:11,4:13:5.14:265,5,0	1/1:3,12:15:11.89:173,12,0	1/1:2,9:11:12.04:174,12,0	1/1:16,0:15:2.37:136,2,0	0/1:25,0:23:66.83:67,0,99	0/1:23,0:23:93.20:120,0,93	0/1:12,0:11:3.49:16,0,3
chr10	6847306	.	AAC	A	5363.73	PASS	AB=0.971;AC=49;AF=0.875;AN=56;BaseQRankSum=4.268;DP=503;FS=10.452;HRun=0;HaplotypeScore=94.6956;InbreedingCoeff=0.2066;MQ=55.25;MQ0=36;MQRankSum=-1.477;QD=11.81;ReadPosRankSum=-0.719;VQSLOD=3.9244;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:46:99:0,128,1585	1/1:7,0:7:5.93:43,6,0	0/1:19,0:10:9.02:9,0,155	0/1:23,0:10:16.12:16,0,79	1/1:25,1:23:61.53:481,62,0	1/1:15,0:14:31.62:271,32,0	1/1:16,2:15:23.99:242,24,0	1/1:21,1:21:8.50:211,8,0	1/1:18,0:17:17.95:157,18,0	1/1:18,3:20:49.66:417,50,0	1/1:11,1:11:22.80:164,23,0	1/1:9,0:8:8.92:67,9,0	1/1:12,1:13:35.45:298,35,0	1/1:10,0:8:8.93:71,9,0	1/1:15,0:14:32.26:242,32,0	1/1:14,0:14:17.94:155,18,0	1/1:30,1:29:63.56:512,64,0	1/1:19,0:16:23.94:192,24,0	1/1:21,2:20:50.68:434,51,0	1/1:15,2:15:32.61:264,33,0	0/1:5,1:5:28.77:93,0,29	1/1:15,0:13:20.70:243,21,0	1/1:14,1:15:11.30:97,11,0	1/1:9,1:10:11.98:101,12,0	1/1:15,1:15:26.58:262,27,0	1/1:25,0:23:19.70:153,20,0	0/1:23,0:23:10.25:151,0,10	0/1:12,0:11:0.77:19,0,1
chr10	6847307	.	AC	A	6182.57	PASS	AB=0.979;AC=50;AF=0.893;AN=56;BaseQRankSum=5.279;DP=490;FS=14.206;HRun=1;HaplotypeScore=83.5892;InbreedingCoeff=0.5142;MQ=55.78;MQ0=36;MQRankSum=-2.763;QD=14.65;ReadPosRankSum=-0.601;VQSLOD=3.0544;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:46:99:0,115,1183	1/1:6,1:7:5.90:37,6,0	0/0:19,0:10:7.73:0,8,151	0/1:22,1:10:13.42:13,0,60	1/1:24,1:22:59.59:460,60,0	1/1:6,7:12:34.47:369,34,0	1/1:5,13:15:24.01:284,24,0	1/1:20,1:20:13.85:191,14,0	1/1:3,15:17:17.99:223,18,0	1/1:21,0:20:50.52:384,51,0	1/1:12,0:11:22.80:147,23,0	1/1:8,1:8:8.85:57,9,0	1/1:13,0:13:35.61:268,36,0	1/1:9,1:8:8.81:54,9,0	1/1:12,2:13:33.60:213,34,0	1/1:0,14:14:18.06:240,18,0	1/1:20,11:29:73.30:732,73,0	1/1:19,0:16:23.52:145,24,0	1/1:18,4:19:53.67:443,54,0	1/1:10,6:15:34.94:313,35,0	0/1:7,0:6:14.94:90,0,15	1/1:15,0:13:32.02:245,32,0	1/1:14,0:14:11.58:74,12,0	1/1:10,0:10:11.80:76,12,0	1/1:12,4:15:37.48:335,37,0	1/1:24,0:22:60.63:399,61,0	1/1:24,0:24:48.31:330,48,0	1/1:6,0:5:8.42:61,8,0
chr10	6847308	.	CAAA	C	3476.18	PASS	AB=0.992;AC=37;AF=0.661;AN=56;BaseQRankSum=2.035;DP=494;FS=2.062;HRun=13;HaplotypeScore=105.7748;InbreedingCoeff=-0.0241;MQ=55.81;MQ0=36;MQRankSum=0.445;QD=8.28;ReadPosRankSum=2.256;VQSLOD=0.5383;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:45:99:0,131,2746	1/1:7,0:7:3.87:24,4,0	0/0:20,0:10:14.83:0,15,306	0/1:23,0:10:9.10:9,0,117	0/1:26,0:23:3.53:62,0,4	1/1:12,1:12:28.29:285,28,0	1/1:18,0:15:23.79:204,24,0	0/1:21,0:20:24.40:33,0,24	1/1:16,2:17:17.86:152,18,0	0/1:21,0:20:34.27:34,0,46	0/1:12,0:11:5.88:28,0,6	1/1:9,0:8:6.36:41,6,0	0/1:12,0:12:12.44:46,0,12	1/1:10,0:8:8.63:61,9,0	0/1:13,0:13:19.22:100,0,19	1/1:14,0:14:16.56:113,17,0	1/1:31,1:30:5.86:477,6,0	1/1:19,0:16:23.81:180,24,0	1/1:21,1:19:46.16:511,46,0	1/1:16,0:14:27.91:297,28,0	0/1:8,0:7:5.05:5,0,98	0/1:15,0:13:48.30:59,0,48	0/1:15,0:15:38.94:59,0,39	1/1:10,0:10:11.75:73,12,0	0/1:17,0:16:9.03:254,0,9	0/1:24,0:22:48.51:49,0,108	0/1:22,3:25:70.17:319,0,70	0/0:6,0:5:9.75:0,10,60
chr10	6847311	.	A	AAAC	2790.01	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=-0.192;DP=494;FS=0.851;HRun=0;HaplotypeScore=111.9165;InbreedingCoeff=0.8472;MQ=56.32;MQ0=35;MQRankSum=-1.618;QD=12.51;ReadPosRankSum=0.390;VQSLOD=3.3914;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:45:99:0,131,2289	0/0:7,0:7:5.93:0,6,53	0/0:21,0:11:18.55:0,19,287	0/1:24,0:10:40.16:40,0,74	0/0:25,0:22:52.47:0,52,438	1/1:14,0:13:26.84:161,27,0	1/1:18,0:15:20.33:103,20,0	0/0:24,0:23:39.10:0,39,295	1/1:18,0:17:20.19:119,20,0	0/0:21,0:20:47.82:0,48,421	0/0:12,0:11:16.55:0,17,120	0/0:9,0:9:10.49:0,10,89	0/0:11,0:11:29.99:0,30,302	0/0:9,0:8:8.97:0,9,90	0/0:12,0:12:14.71:0,15,221	1/1:13,0:13:11.06:66,11,0	1/1:30,0:29:22.11:362,22,0	0/0:20,0:17:12.09:0,12,232	1/1:21,0:19:48.11:340,48,0	1/1:17,0:15:31.70:235,32,0	0/0:8,0:8:22.21:0,22,231	0/0:16,0:14:29.98:0,30,282	0/0:16,0:16:20.84:0,21,214	0/0:10,0:10:12.04:0,12,163	1/1:15,0:15:14.68:200,15,0	1/1:4,15:20:25.92:733,26,0	1/1:18,3:25:46.31:637,46,0	1/1:4,0:3:2.56:11,3,0
chr10	6848518	.	GTA	G	508.34	PASS	AB=0.951;AC=11;AF=0.196;AN=56;BaseQRankSum=9.291;DP=694;FS=8.483;HRun=0;HaplotypeScore=152.0273;InbreedingCoeff=-0.0498;MQ=45.74;MQ0=21;MQRankSum=-2.351;QD=2.32;ReadPosRankSum=-6.317;VQSLOD=-0.6278;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:23:8.46:8,0,158	0/1:10,0:10:9.26:9,0,101	0/0:29,0:10:24.51:0,25,327	0/0:44,0:15:26.46:0,26,350	0/0:19,2:21:0.14:0,0,358	0/0:21,0:20:54.15:0,54,926	0/0:21,0:20:48.59:0,49,788	0/1:40,0:33:99:144,0,598	0/0:32,0:32:84.22:0,84,1457	0/1:24,4:26:99:143,0,619	1/1:14,3:16:8.97:71,9,0	0/1:21,4:24:99:145,0,100	0/1:19,0:19:0.27:0,0,178	0/1:15,1:16:26.96:27,0,191	0/0:16,3:19:9.03:0,9,164	0/0:17,0:17:48.15:0,48,847	0/0:42,0:42:70.77:0,71,1502	0/1:18,0:18:42.60:43,0,387	0/0:23,0:18:54.03:0,54,815	0/0:35,0:35:96.23:0,96,1558	0/0:33,0:32:8.89:0,9,116	0/1:19,3:21:58.65:59,0,380	0/0:14,2:16:9.02:0,9,131	0/0:26,0:25:7.79:0,8,211	0/0:22,0:22:57.15:0,57,952	0/0:31,0:30:87.25:0,87,1434	0/0:27,0:27:66.09:0,66,1048	0/0:16,0:16:33.04:0,33,505
chr10	6848530	.	A	ATG	2029.10	PASS	AB=0.741;AC=15;AF=0.268;AN=56;BaseQRankSum=2.026;DP=700;FS=18.534;HRun=0;HaplotypeScore=163.0127;InbreedingCoeff=-0.2577;MQ=50.88;MQ0=14;MQRankSum=-4.151;QD=6.22;ReadPosRankSum=-0.866;VQSLOD=2.1266;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:15,11:25:70.47:70,0,83	0/1:8,3:11:44.43:44,0,119	0/0:29,0:14:34.19:0,34,444	0/0:41,0:23:40.84:0,41,710	0/1:15,10:25:98.86:242,0,99	0/0:20,0:19:51.17:0,51,697	0/0:22,0:22:51.06:0,51,643	0/1:35,13:42:99:559,0,605	0/0:33,0:33:81.23:0,81,1075	0/1:17,8:23:99:377,0,266	0/0:14,6:19:18.04:0,18,220	0/1:14,9:22:99:101,0,142	0/1:10,9:19:99:122,0,104	0/1:9,5:14:70.83:87,0,71	0/1:8,11:19:66.09:85,0,66	0/0:17,0:17:39.13:0,39,535	0/0:43,0:42:99:0,108,1441	0/1:15,3:18:99:149,0,109	0/0:22,0:18:41.70:0,42,527	0/0:35,0:35:99:0,99,1324	1/1:25,8:32:1.25:3,1,0	0/1:17,5:21:99:209,0,247	0/1:9,8:16:44.68:45,0,73	0/1:18,8:26:31.60:91,0,32	0/0:22,0:22:57.15:0,57,748	0/0:31,0:31:23.07:0,23,880	0/0:24,0:24:63.21:0,63,863	0/0:14,0:14:36.10:0,36,469
chr10	6848542	.	A	ATGTGTG	3106.75	PASS	AB=0.837;AC=25;AF=0.446;AN=56;BaseQRankSum=13.811;DP=704;FS=3.666;HRun=0;HaplotypeScore=205.6741;InbreedingCoeff=0.7491;MQ=53.34;MQ0=7;MQRankSum=-2.738;QD=9.36;ReadPosRankSum=-6.619;VQSLOD=0.3637;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:24,3:27:5.95:93,0,6	1/1:11,2:13:14.31:140,14,0	0/0:31,0:19:30.90:0,31,483	0/0:39,0:24:59.08:0,59,830	1/1:26,3:29:8.54:229,9,0	0/0:21,0:20:51.06:0,51,878	0/0:22,0:21:50.52:0,51,779	1/1:49,0:47:73.35:806,73,0	0/0:31,0:31:59.14:0,59,1469	1/1:22,4:24:26.89:698,27,0	1/1:20,4:23:27.57:192,28,0	0/1:21,4:24:0.35:151,0,0	1/1:16,5:21:7.57:209,8,0	1/1:14,1:15:1.41:41,1,0	1/1:12,7:19:9.45:74,9,0	0/0:16,0:16:42.09:0,42,812	0/0:44,0:43:99:0,117,2209	1/1:19,1:20:38.24:341,38,0	0/0:17,0:15:44.97:0,45,710	0/0:34,0:34:96.17:0,96,1814	0/0:29,1:29:0:0,0,0	1/1:21,1:21:19.33:186,19,0	0/1:12,6:17:10.98:63,0,11	1/1:21,3:24:11.81:90,12,0	0/0:22,0:22:60.13:0,60,1210	0/0:25,0:25:75.19:0,75,1486	0/0:24,0:24:66.03:0,66,1222	0/0:15,0:15:41.99:0,42,720
chr10	6848635	.	C	CTTT	7302.84	PASS	AB=0.552;AC=29;AF=0.518;AN=56;BaseQRankSum=-5.225;DP=492;FS=0.000;HRun=9;HaplotypeScore=85.3207;InbreedingCoeff=0.9447;MQ=61.99;MQ0=7;MQRankSum=-5.794;QD=28.86;ReadPosRankSum=1.788;VQSLOD=3.4607;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,3:26:33.11:502,33,0	1/1:5,8:13:20.58:468,21,0	0/0:29,0:18:13.53:0,14,267	0/0:29,0:15:22.85:0,23,226	1/1:6,15:25:47.89:754,48,0	0/0:20,0:20:42.13:0,42,530	0/0:16,0:13:33.10:0,33,417	1/1:10,11:21:41.95:597,42,0	0/0:19,0:19:45.11:0,45,555	1/1:8,12:21:40.63:619,41,0	1/1:4,15:21:33.10:594,33,0	1/1:1,10:11:21.05:378,21,0	1/1:6,6:12:24.04:440,24,0	1/1:4,8:11:14.71:295,15,0	0/1:3,13:16:1.79:614,0,2	0/0:13,0:13:36.08:0,36,438	0/0:31,0:30:53.88:0,54,831	1/1:7,7:13:23.13:396,23,0	0/0:18,0:13:33.07:0,33,400	0/0:14,0:14:39.12:0,39,492	1/1:3,6:10:18.04:319,18,0	1/1:6,10:17:24.06:437,24,0	1/1:3,8:13:32.98:520,33,0	1/1:3,6:13:24.05:371,24,0	0/0:11,0:11:21.03:0,21,265	0/0:16,0:16:45.11:0,45,557	0/0:14,0:14:36.09:0,36,454	0/0:9,0:9:15.03:0,15,189
chr10	6848727	.	A	AC	1200.75	PASS	AB=1.000;AC=28;AF=0.636;AN=44;BaseQRankSum=-3.794;DP=313;FS=0.867;HRun=7;HaplotypeScore=39.9217;InbreedingCoeff=0.4415;MQ=57.25;MQ0=37;MQRankSum=0.593;QD=6.06;ReadPosRankSum=0.759;VQSLOD=-0.6223;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	1/1:3,2:5:9.87:93,10,0	0/0:40,0:9:10.24:0,10,91	0/1:25,0:7:26.71:27,0,33	1/1:8,0:7:8.14:50,8,0	./.	1/1:7,1:2:2.84:14,3,0	1/1:15,2:12:19.96:173,20,0	./.	1/1:4,5:7:8.91:78,9,0	1/1:12,2:13:17.92:168,18,0	0/0:11,0:9:2.85:0,3,9	0/1:7,0:6:1.82:3,0,2	0/1:13,0:10:19.62:24,0,20	1/1:2,8:9:5.23:43,5,0	./.	1/1:5,0:5:7.99:57,8,0	1/1:16,4:19:21.13:266,21,0	0/0:6,0:4:2.74:0,3,12	./.	1/1:10,1:9:16.18:123,16,0	1/1:7,0:7:6.85:36,7,0	1/1:17,0:15:16.99:127,17,0	0/1:14,0:12:13.88:72,0,14	./.	0/0:11,0:9:11.96:0,12,98	0/0:16,0:15:21.58:0,22,160	0/0:8,0:7:6.01:0,6,57
chr10	6848841	.	CCCT	C	203.53	PASS	AB=0.981;AC=21;AF=0.404;AN=52;BaseQRankSum=-0.275;DP=345;FS=4.383;HRun=0;HaplotypeScore=34.3704;InbreedingCoeff=0.1048;MQ=42.91;MQ0=110;MQRankSum=-1.488;QD=1.65;ReadPosRankSum=1.775;VQSLOD=0.9384;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:17,12:22:2.39:0,2,47	1/1:3,0:3:2.28:25,2,0	0/0:55,0:4:10.61:0,11,75	0/0:63,0:5:14.17:0,14,156	0/1:6,0:4:14.75:36,0,15	1/1:4,0:3:0.42:1,0,0	0/1:10,0:7:24.15:24,0,48	0/0:9,0:5:8.89:0,9,66	0/0:5,0:4:0.73:0,1,22	0/0:8,0:2:3.46:0,3,25	0/0:4,0:2:2.88:0,3,15	0/1:4,0:4:7.70:42,0,8	1/1:4,0:2:5.27:21,5,0	1/1:5,0:3:8.78:64,9,0	0/1:6,0:5:3.14:3,0,6	0/1:11,0:10:14.88:15,0,37	0/1:24,0:17:7.11:54,0,7	0/1:11,0:6:4.85:5,0,25	0/0:12,0:10:10.28:0,10,159	0/0:9,0:8:6.01:0,6,69	0/1:7,0:3:5.51:6,0,14	./.	./.	1/1:5,1:5:8.46:46,8,0	1/1:8,0:4:0.18:0,0,0	0/1:13,0:10:1.58:2,0,71	0/0:16,0:9:18.89:0,19,186	0/0:8,0:5:6.47:0,6,72
chr10	6848842	.	CCT	C	669.23	PASS	AB=0.951;AC=27;AF=0.519;AN=52;BaseQRankSum=-1.903;DP=352;FS=1.783;HRun=0;HaplotypeScore=30.7899;InbreedingCoeff=0.0568;MQ=42.68;MQ0=112;MQRankSum=-0.026;QD=3.98;ReadPosRankSum=1.756;VQSLOD=1.1882;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:24:4.11:0,4,50	1/1:3,0:3:2.24:19,2,0	0/0:55,0:4:5.68:0,6,57	0/0:63,0:5:14.48:0,14,122	0/1:6,0:4:15.22:19,0,15	0/1:5,0:3:0.05:0,0,0	0/1:4,5:7:27.72:58,0,28	0/0:8,0:5:8.11:0,8,46	1/1:5,0:4:5.78:39,6,0	0/0:8,0:2:3.46:0,3,25	0/0:4,0:2:2.88:0,3,15	1/1:5,0:4:8.06:37,8,0	1/1:4,0:2:5.27:21,5,0	1/1:5,0:3:8.07:35,8,0	0/1:6,0:5:2.79:8,0,3	0/1:10,1:10:9.47:168,0,9	1/1:22,4:18:18.21:201,18,0	0/1:11,0:6:4.86:5,0,25	0/1:11,1:10:30.65:45,0,31	0/0:5,4:8:3.85:0,4,22	0/1:7,0:3:5.51:6,0,13	./.	./.	1/1:6,0:5:2.48:23,2,0	1/1:8,0:4:8.84:55,9,0	0/1:13,0:10:41.73:60,0,42	0/1:17,0:9:6.62:7,0,53	0/1:8,0:5:14.92:15,0,29
chr10	6849309	.	T	TTCTCTC	3071.84	PASS	AB=1.000;AC=44;AF=0.846;AN=52;BaseQRankSum=-0.521;DP=555;FS=17.666;HRun=0;HaplotypeScore=136.4083;InbreedingCoeff=0.2824;MQ=67.54;MQ0=12;MQRankSum=-0.826;QD=6.18;ReadPosRankSum=-3.359;VQSLOD=0.5073;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:22:5.65:29,6,0	1/1:5,0:5:6.02:128,6,0	./.	0/1:23,0:16:0:0,0,0	1/1:25,0:25:9.03:208,9,0	0/0:19,0:19:9.02:0,9,124	1/1:18,0:24:9.03:120,9,0	1/1:31,0:30:10.54:95,11,0	1/1:13,0:13:9.03:199,9,0	1/1:17,0:17:15.94:287,16,0	0/1:22,0:22:0:0,0,0	0/1:15,0:15:0:0,0,0	0/1:9,0:7:0:0,0,0	1/1:14,0:14:2.99:24,3,0	1/1:24,0:23:7.58:108,8,0	1/1:12,0:12:15.05:256,15,0	1/1:14,2:19:12.51:206,13,0	1/1:23,0:22:9.03:143,9,0	1/1:25,0:30:18.07:328,18,0	1/1:17,0:16:3.01:42,3,0	1/1:40,0:40:12.01:192,12,0	1/1:22,0:22:9.02:125,9,0	./.	1/1:20,0:18:5.69:49,6,0	1/1:11,0:11:6.02:104,6,0	0/1:21,0:21:97.37:223,0,97	1/1:12,2:16:12.04:268,12,0	0/1:18,0:17:17.89:50,0,18
chr10	6849333	.	C	CTCTC	2127.75	PASS	AB=0.957;AC=41;AF=0.854;AN=48;BaseQRankSum=-1.736;DP=561;FS=13.320;HRun=0;HaplotypeScore=101.7361;InbreedingCoeff=0.0967;MQ=51.69;MQ0=22;MQRankSum=-0.538;QD=4.74;ReadPosRankSum=-1.715;VQSLOD=0.6476;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:20:5.12:21,5,0	1/1:5,0:5:6.49:82,6,0	1/1:32,0:9:0.47:2,0,0	./.	1/1:24,0:24:9.03:118,9,0	0/0:25,0:24:8.54:0,9,102	1/1:24,0:23:9.03:208,9,0	1/1:29,0:28:7.73:70,8,0	1/1:13,0:13:9.03:142,9,0	1/1:16,0:16:12.04:149,12,0	./.	0/1:16,0:16:0:0,0,0	./.	1/1:17,0:17:2.99:24,3,0	1/1:16,0:15:5.89:84,6,0	1/1:16,0:16:15.05:256,15,0	0/1:20,0:19:7.19:47,0,7	1/1:20,0:19:6.02:82,6,0	1/1:22,0:22:17.98:314,18,0	1/1:13,0:12:3.01:42,3,0	1/1:30,0:30:12:127,12,0	1/1:21,0:21:8.66:78,9,0	./.	0/1:15,0:13:5.75:32,0,6	1/1:15,0:15:6.02:105,6,0	0/1:22,0:22:74.89:153,0,75	1/1:18,0:18:3.01:57,3,0	0/1:16,5:20:15.57:53,0,16
chr10	6849740	.	CT	C	263.89	PASS	AB=0.917;AC=15;AF=0.278;AN=54;BaseQRankSum=0.759;DP=276;FS=4.801;HRun=2;HaplotypeScore=55.6254;InbreedingCoeff=0.2040;MQ=47.82;MQ0=33;MQRankSum=1.783;QD=2.84;ReadPosRankSum=-0.189;VQSLOD=-0.4082;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:15:35.62:0,36,297	1/1:1,0:1:2.68:11,3,0	0/1:8,0:4:1.67:2,0,40	0/1:26,0:9:16.55:17,0,40	0/0:4,4:8:3.01:0,3,45	0/0:9,0:9:11.95:0,12,136	0/0:16,0:13:27.02:0,27,355	0/1:14,0:6:30.80:31,0,134	0/0:9,0:7:21.03:0,21,268	0/1:8,1:8:72.06:105,0,72	1/1:3,4:7:2.60:10,3,0	1/1:1,2:3:6:62,6,0	1/1:4,3:6:9.03:115,9,0	./.	0/1:7,2:7:9.89:10,0,90	0/0:10,0:8:21.03:0,21,277	0/0:12,0:11:23.97:0,24,266	0/1:2,0:2:29.65:30,0,38	0/0:14,0:9:24.07:0,24,322	0/0:10,0:9:17.99:0,18,208	0/0:7,1:6:4.78:0,5,25	0/0:6,2:7:5.98:0,6,46	0/1:4,3:7:12.28:22,0,12	0/0:3,0:2:0.47:0,0,1	0/0:5,0:4:12.01:0,12,155	0/0:20,0:13:27.96:0,28,353	0/0:18,0:14:33.10:0,33,446	0/0:15,0:10:19.68:0,20,323
chr10	6849741	.	T	TC	442.09	PASS	AB=0.896;AC=15;AF=0.278;AN=54;BaseQRankSum=-1.035;DP=273;FS=5.165;HRun=1;HaplotypeScore=55.7783;InbreedingCoeff=0.1952;MQ=47.86;MQ0=34;MQRankSum=1.743;QD=4.86;ReadPosRankSum=-1.365;VQSLOD=0.0048;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:15:34.98:0,35,266	1/1:1,0:1:0.89:2,1,0	0/1:7,0:4:1.67:2,0,36	0/1:24,0:8:16.55:17,0,37	0/0:6,2:8:2.97:0,3,42	0/0:10,0:10:11.62:0,12,120	0/0:17,0:14:26.27:0,26,319	0/1:12,2:6:68.30:68,0,138	0/0:9,0:7:21.02:0,21,252	0/1:5,3:7:65.69:143,0,66	1/1:7,1:7:3.01:48,3,0	1/1:3,0:3:6.02:86,6,0	1/1:8,0:7:9.03:115,9,0	./.	0/1:9,0:7:9.89:10,0,87	0/0:10,0:8:21.03:0,21,263	0/0:11,0:10:26.98:0,27,293	0/1:1,1:2:35.46:39,0,35	0/0:13,0:8:24.07:0,24,302	0/0:10,0:9:17.99:0,18,199	0/0:6,2:6:4.78:0,5,25	0/0:4,4:7:5.98:0,6,46	0/1:7,0:7:11.76:59,0,12	0/0:1,2:2:0.47:0,0,1	0/0:5,0:4:12.01:0,12,143	0/0:19,0:12:29.99:0,30,385	0/0:18,0:14:33.02:0,33,429	0/0:15,0:10:30.05:0,30,370
chr10	6849750	.	CTCTCT	C	953.56	PASS	AB=0.943;AC=20;AF=0.417;AN=48;BaseQRankSum=-0.333;DP=231;FS=5.199;HRun=0;HaplotypeScore=54.2712;InbreedingCoeff=0.1439;MQ=35.33;MQ0=36;MQRankSum=1.372;QD=7.69;ReadPosRankSum=4.333;VQSLOD=1.0133;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:16:9.47:215,9,0	1/1:1,0:1:3.01:37,3,0	./.	./.	1/1:8,0:7:2.28:26,2,0	0/0:10,0:10:5.60:0,6,28	0/0:18,0:15:3.69:0,4,79	0/0:13,0:5:2.99:0,3,23	0/0:10,0:8:16:0,16,167	0/1:5,0:4:20.01:32,0,20	./.	./.	1/1:8,0:7:8.31:81,8,0	0/0:3,0:3:0:0,0,0	0/1:9,0:7:10.09:10,0,14	0/0:8,0:6:7.49:0,7,95	0/1:6,0:6:34.57:35,0,56	1/1:3,0:3:2.37:8,2,0	1/1:13,0:8:2.58:10,3,0	0/1:9,0:8:31.51:32,0,93	0/0:8,0:5:1.25:0,1,3	0/0:5,0:4:1.77:0,2,4	0/0:9,0:8:0.47:0,0,1	0/0:3,0:2:0.47:0,0,1	0/0:4,0:3:5.73:0,6,66	0/1:9,10:12:8.92:214,0,9	1/1:15,0:11:21.07:282,21,0	0/1:11,0:5:28.02:109,0,28
chr10	6849754	.	CT	C	627.93	PASS	AB=0.792;AC=12;AF=0.250;AN=48;BaseQRankSum=0.203;DP=229;FS=9.020;HRun=2;HaplotypeScore=51.4822;InbreedingCoeff=-0.0158;MQ=34.63;MQ0=38;MQRankSum=1.983;QD=6.47;ReadPosRankSum=1.557;VQSLOD=0.2200;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:7,9:15:17.35:202,0,17	1/1:2,0:2:0.15:6,0,0	./.	./.	0/0:5,3:7:4.25:0,4,37	0/0:3,6:10:9.52:0,10,33	0/0:17,1:15:5.46:0,5,169	0/0:13,0:5:14.78:0,15,112	0/0:9,1:8:17.68:0,18,239	0/1:5,1:5:33.78:34,0,37	./.	./.	1/1:6,2:7:10.27:117,10,0	0/0:2,1:3:0:0,0,0	0/0:7,2:7:14.70:0,15,106	0/0:6,2:6:11.63:0,12,144	0/1:5,1:6:34.40:34,0,80	0/1:3,0:3:1.82:2,0,13	0/0:15,0:10:14.32:0,14,128	0/1:6,2:7:30.06:30,0,104	0/0:7,1:5:2.90:0,3,16	0/0:2,2:4:2.49:0,2,6	0/0:3,5:7:0.89:0,1,2	0/0:2,0:2:0.87:0,1,2	0/0:3,1:4:6.02:0,6,90	0/1:17,2:12:29.05:125,0,29	0/1:5,11:12:25.57:132,0,26	0/1:7,6:4:28.24:73,0,28
chr10	6849755	.	T	TC	651.15	PASS	AB=0.940;AC=12;AF=0.250;AN=48;BaseQRankSum=0.819;DP=233;FS=7.557;HRun=1;HaplotypeScore=52.6282;InbreedingCoeff=0.0774;MQ=33.44;MQ0=40;MQRankSum=1.526;QD=5.47;ReadPosRankSum=1.879;VQSLOD=0.4351;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:16,2:16:14.53:207,0,15	0/0:2,0:2:1.81:0,2,11	./.	./.	0/0:9,0:8:4.17:0,4,20	0/0:7,0:10:11.92:0,12,88	0/1:16,0:14:2.64:3,0,158	0/0:13,0:5:14.78:0,15,110	0/0:9,0:7:17.95:0,18,224	0/1:8,0:7:33.78:34,0,35	./.	./.	1/1:4,4:7:10.58:117,11,0	0/1:2,2:3:0:0,0,0	0/0:9,0:7:14.68:0,15,105	0/0:7,0:6:12.01:0,12,145	0/1:6,0:6:26.95:27,0,77	0/0:2,0:2:2.94:0,3,18	0/0:15,0:10:13.25:0,13,126	0/1:8,0:7:23.08:23,0,103	0/0:8,0:4:2.90:0,3,16	0/0:5,0:5:2.49:0,2,6	0/0:7,1:7:0.89:0,1,2	0/0:2,0:2:0.87:0,1,2	0/0:4,0:4:6.02:0,6,84	0/1:18,0:12:24.53:126,0,25	1/1:13,1:12:14.70:164,15,0	0/1:15,0:4:28.05:83,0,28
chr10	6850779	.	CAAAA	C	1616.89	PASS	AB=0.988;AC=16;AF=0.286;AN=56;BaseQRankSum=-11.094;DP=497;FS=4.753;HRun=15;HaplotypeScore=133.4512;InbreedingCoeff=0.1142;MQ=50.24;MQ0=14;MQRankSum=6.372;QD=6.24;ReadPosRankSum=-4.278;VQSLOD=-0.5053;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,1:33:4.86:0,5,339	0/0:6,0:6:9.03:0,9,151	0/0:27,0:11:18.99:0,19,158	0/0:34,0:14:17.28:0,17,101	0/0:9,0:9:11.92:0,12,133	0/1:15,0:15:55.58:56,0,211	0/1:22,0:22:60.74:61,0,371	0/1:25,0:22:31.98:32,0,106	0/1:19,0:17:9.44:9,0,365	0/0:27,0:27:28.28:0,28,567	0/0:9,0:9:17.76:0,18,212	0/0:12,0:12:12.04:0,12,214	0/0:4,0:7:15.05:0,15,264	0/0:12,0:13:24.07:0,24,386	0/0:25,0:24:26.95:0,27,386	0/1:13,0:13:84.68:85,0,233	0/1:31,0:30:99:144,0,299	0/0:12,0:12:9.03:0,9,133	0/1:28,0:18:99:105,0,257	0/1:9,0:9:49.71:50,0,116	0/0:7,0:7:14.97:0,15,173	0/0:8,0:7:9.03:0,9,149	0/1:6,0:7:2.27:2,0,113	0/1:32,0:32:3.84:4,0,113	0/0:6,0:6:18.04:0,18,206	1/1:14,9:24:51.38:581,51,0	1/1:2,20:23:37.33:493,37,0	1/1:5,5:10:11.87:163,12,0
chr10	6850782	.	A	ACAAAAAAAC	12845.88	PASS	AB=0.751;AC=39;AF=0.696;AN=56;BaseQRankSum=-7.517;DP=521;FS=7.309;HRun=0;HaplotypeScore=139.7084;InbreedingCoeff=0.2033;MQ=53.95;MQ0=17;MQRankSum=-3.554;QD=30.73;ReadPosRankSum=4.105;VQSLOD=4.0335;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:31:23.55:992,24,0	1/1:0,4:6:9.03:384,9,0	0/0:34,0:13:11.26:0,11,119	0/0:36,0:13:21.37:0,21,149	1/1:0,5:11:20.79:469,21,0	0/1:8,0:15:24.66:374,0,25	0/1:11,0:21:99:367,0,115	1/1:7,0:23:53.83:872,54,0	0/1:12,0:18:39.39:296,0,39	1/1:1,23:31:75.69:1933,76,0	1/1:2,7:10:22.75:557,23,0	1/1:1,6:13:15.03:554,15,0	1/1:5,1:9:14.96:669,15,0	1/1:2,10:14:24.08:1024,24,0	1/1:6,20:25:26.07:907,26,0	0/1:7,0:13:46.93:315,0,47	0/1:22,0:30:90.47:538,0,90	1/1:0,7:15:9.03:386,9,0	0/1:19,0:17:86.17:203,0,86	0/1:6,0:8:56.14:89,0,56	1/1:3,4:8:14.26:334,14,0	1/1:4,3:6:8.94:406,9,0	1/1:1,5:7:12.36:386,12,0	1/1:5,17:31:15.58:685,16,0	0/1:3,0:6:26.57:91,0,27	0/1:29,0:29:14.89:15,0,947	0/0:23,0:23:44.43:0,44,956	0/0:10,0:10:27.03:0,27,441
chr10	6850784	.	A	AAAC	4151.75	PASS	AB=0.972;AC=31;AF=0.554;AN=56;BaseQRankSum=2.792;DP=507;FS=1.892;HRun=0;HaplotypeScore=127.8720;InbreedingCoeff=-0.1022;MQ=56.08;MQ0=17;MQRankSum=-6.778;QD=11.10;ReadPosRankSum=8.280;VQSLOD=2.8537;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:10,19:33:14.85:468,0,15	1/1:5,0:5:8.97:69,9,0	0/0:35,0:15:26.91:0,27,210	0/0:34,0:13:6.42:0,6,67	1/1:9,0:9:8.06:89,8,0	0/1:15,0:15:21.66:287,0,22	0/1:21,0:21:79.80:371,0,80	0/1:29,0:26:46.01:46,0,187	0/1:20,0:18:15.95:359,0,16	1/1:25,0:25:17.01:364,17,0	0/1:10,0:10:26.79:66,0,27	0/1:13,0:13:6.80:58,0,7	0/1:9,0:9:30.88:73,0,31	1/1:13,0:13:23.60:162,24,0	1/1:26,0:25:4.28:114,4,0	0/1:13,0:13:13.72:298,0,14	0/1:30,0:29:85.06:404,0,85	1/1:13,0:13:8.98:72,9,0	0/1:27,0:18:51.65:285,0,52	0/1:8,0:8:35.13:119,0,35	0/1:8,0:8:3.86:78,0,4	1/1:7,0:6:8.82:60,9,0	1/1:6,0:6:7.66:70,8,0	0/1:25,0:25:6.04:104,0,6	0/1:6,0:6:9.51:134,0,10	0/0:32,0:31:65.06:0,65,640	0/0:22,0:22:41.87:0,42,439	0/0:10,0:10:27.01:0,27,252
chr10	6850787	.	A	AAC	1586.19	PASS	AB=0.802;AC=19;AF=0.339;AN=56;BaseQRankSum=2.558;DP=506;FS=0.000;HRun=0;HaplotypeScore=130.6675;InbreedingCoeff=-0.0272;MQ=61.36;MQ0=17;MQRankSum=-4.699;QD=6.90;ReadPosRankSum=2.633;VQSLOD=3.3095;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:34:4.22:0,4,147	1/1:5,0:5:0.06:1,0,0	0/0:39,0:18:23.96:0,24,206	0/0:32,0:13:9.65:0,10,78	0/0:9,0:9:2.59:0,3,13	0/1:8,7:15:19.43:207,0,19	0/1:11,10:21:43.23:297,0,43	0/0:30,0:27:29.16:0,29,401	0/1:12,8:18:18.95:261,0,19	0/1:28,0:28:27.42:27,0,150	0/0:10,0:10:13.40:0,13,76	0/0:13,0:13:3.72:0,4,22	0/0:9,0:9:9.13:0,9,59	1/1:13,0:13:0.29:23,0,0	0/1:26,0:25:1.50:2,0,47	0/1:7,6:13:2.03:205,0,2	0/1:20,8:27:56.72:258,0,57	0/0:14,0:14:1.96:0,2,20	0/1:19,7:19:28.75:242,0,29	0/1:6,2:8:28.29:73,0,28	0/1:8,0:8:0.62:1,0,41	1/1:6,0:5:1.59:19,2,0	1/1:6,0:6:1.68:11,2,0	0/0:22,0:22:8.94:0,9,66	0/1:4,3:7:2.63:101,0,3	0/0:30,0:29:77.72:0,78,672	0/0:21,0:21:38.58:0,39,298	0/0:9,0:9:17.97:0,18,146
chr10	6851025	.	T	TAAA	2333.25	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-3.475;DP=348;FS=0.000;HRun=12;HaplotypeScore=57.2230;InbreedingCoeff=0.8366;MQ=71.05;MQ0=2;MQRankSum=-1.702;QD=27.13;ReadPosRankSum=0.672;VQSLOD=2.3208;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:31:67.61:0,68,408	0/0:6,0:7:14.86:0,15,152	0/0:16,0:10:17.62:0,18,187	0/0:14,0:8:3.02:0,3,27	0/0:14,0:16:41.87:0,42,424	1/1:5,4:15:27.07:414,27,0	1/1:0,1:1:3.01:55,3,0	0/0:16,0:16:23.82:0,24,257	1/1:3,8:11:24.08:410,24,0	0/0:22,0:22:51:0,51,572	0/0:14,0:14:36.04:0,36,403	0/0:3,0:3:2.97:0,3,34	0/0:6,0:7:14.92:0,15,152	0/0:5,0:5:8.94:0,9,101	0/0:8,0:8:17.99:0,18,202	1/1:1,5:8:21.07:352,21,0	1/1:2,14:15:18.06:330,18,0	0/0:25,0:25:57.05:0,57,637	1/1:10,6:18:30.06:444,30,0	1/1:6,5:11:21.07:356,21,0	0/0:2,0:2:3.01:0,3,33	0/0:3,0:3:5.99:0,6,67	0/0:7,0:8:20.99:0,21,219	0/0:8,0:9:15.91:0,16,197	1/1:2,3:5:9.03:165,9,0	0/0:11,0:12:26.92:0,27,287	0/0:17,0:18:54.09:0,54,589	0/0:25,0:25:53.81:0,54,604
chr10	6851594	.	T	TA	1424.29	PASS	AB=0.841;AC=7;AF=0.130;AN=54;BaseQRankSum=6.310;DP=570;FS=107.394;HRun=0;HaplotypeScore=122.2406;InbreedingCoeff=-0.0979;MQ=36.27;MQ0=11;MQRankSum=-7.932;QD=7.46;ReadPosRankSum=5.153;VQSLOD=0.1519;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,1:23:12.02:0,12,149	0/1:13,0:13:0.49:0,0,36	0/0:25,0:9:27.07:0,27,343	0/0:18,0:10:27.09:0,27,373	0/0:17,1:18:14.75:0,15,204	./.	0/0:13,3:16:5.71:0,6,83	0/1:22,23:44:99:1004,0,549	0/0:16,0:15:6.49:0,6,84	0/1:15,4:18:99:175,0,355	0/0:16,0:16:8.73:0,9,113	0/0:11,5:16:6.02:0,6,83	0/0:16,0:15:15.52:0,16,206	0/0:17,4:22:15.51:0,16,208	0/0:24,10:34:9.03:0,9,125	0/1:19,5:24:0.17:0,0,37	0/0:12,1:12:0.47:0,0,1	0/0:7,0:7:17.99:0,18,215	0/1:25,4:27:99:110,0,497	0/0:20,4:23:18.04:0,18,232	0/0:21,1:21:24.08:0,24,326	0/0:20,1:21:17.36:0,17,247	0/0:14,0:14:8.72:0,9,103	0/0:22,0:22:9.01:0,9,108	0/0:21,0:21:15.05:0,15,207	0/1:27,5:32:99:194,0,807	0/1:23,4:28:53.92:54,0,414	0/0:6,1:7:12.04:0,12,166
chr10	6851601	.	G	GTAGTA	3699.73	PASS	AB=1.000;AC=21;AF=0.389;AN=54;BaseQRankSum=0.275;DP=512;FS=46.938;HRun=0;HaplotypeScore=175.5793;InbreedingCoeff=0.1250;MQ=33.90;MQ0=9;MQRankSum=-2.212;QD=12.17;ReadPosRankSum=2.427;VQSLOD=1.3361;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:6.02:0,6,125	1/1:1,11:13:5:26,5,0	0/0:17,0:5:12.04:0,12,228	0/0:13,0:5:15.05:0,15,275	1/1:17,0:17:9.28:158,9,0	./.	0/1:15,0:14:31.04:157,0,31	0/1:39,0:38:99:983,0,133	0/0:13,0:12:2.54:0,3,61	0/1:17,0:16:40.24:844,0,40	1/1:16,0:16:6.49:159,6,0	0/0:15,0:15:3:0,3,25	0/1:16,0:15:35.18:35,0,182	0/0:22,0:22:6.75:0,7,75	1/1:30,0:30:2.80:73,3,0	1/1:24,0:23:2.88:48,3,0	0/1:10,0:9:1.01:140,0,1	0/1:5,0:5:3.26:152,0,3	0/1:31,0:30:75.16:456,0,75	0/1:22,0:21:34.80:35,0,133	1/1:23,0:22:14.82:392,15,0	0/0:18,0:18:8.22:0,8,147	0/0:12,0:12:2.19:0,2,19	0/0:19,0:19:5.98:0,6,83	0/0:21,0:21:14.65:0,15,217	0/1:25,0:26:42.57:43,0,937	0/0:25,0:25:22.47:0,22,319	0/0:7,0:7:9.03:0,9,183
chr10	6851602	.	T	TA	1840.41	PASS	AB=0.762;AC=17;AF=0.315;AN=54;BaseQRankSum=2.877;DP=492;FS=32.042;HRun=0;HaplotypeScore=113.9930;InbreedingCoeff=0.3511;MQ=33.53;MQ0=9;MQRankSum=-1.369;QD=8.68;ReadPosRankSum=1.889;VQSLOD=1.3694;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:6.02:0,6,83	1/1:13,0:13:4.78:25,5,0	0/0:17,0:5:12.04:0,12,165	0/0:12,0:5:15.05:0,15,206	1/1:4,12:16:9.49:121,9,0	./.	0/0:14,1:14:6.01:0,6,67	0/1:21,13:35:40.14:809,0,40	0/0:12,0:11:3:0,3,42	0/1:5,11:16:20.01:399,0,20	1/1:0,16:16:6.49:91,6,0	0/0:11,4:15:3:0,3,25	0/0:16,0:15:15.41:0,15,169	0/0:17,3:20:9.01:0,9,100	1/1:5,22:27:3.01:48,3,0	1/1:23,1:23:1.98:6,2,0	0/1:9,1:9:0:0,0,0	0/1:2,3:5:17.15:59,0,17	0/1:26,2:27:99:214,0,226	0/0:19,2:20:12.04:0,12,163	1/1:5,14:19:14.99:226,15,0	0/0:17,0:17:8.53:0,9,107	0/0:12,0:12:2.85:0,3,37	0/0:18,0:18:6:0,6,66	0/0:21,0:21:15.03:0,15,174	0/0:26,0:26:17.03:0,17,655	0/0:24,1:25:23.53:0,24,273	0/0:7,0:7:9.03:0,9,124
chr10	6851604	.	T	TA	347.27	PASS	AB=0.959;AC=10;AF=0.200;AN=50;BaseQRankSum=2.243;DP=480;FS=44.112;HRun=0;HaplotypeScore=113.2383;InbreedingCoeff=0.0519;MQ=32.74;MQ0=8;MQRankSum=-2.238;QD=2.30;ReadPosRankSum=1.252;VQSLOD=0.7598;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:6.02:0,6,82	1/1:13,0:13:1.82:6,2,0	0/0:12,0:4:9.03:0,9,122	0/0:10,0:3:9.03:0,9,125	0/1:15,0:15:4.86:6,0,5	./.	0/0:14,0:13:3:0,3,27	0/1:36,0:35:99:223,0,137	0/0:18,0:17:3.01:0,3,40	0/1:16,0:15:36.53:37,0,145	0/1:15,0:15:3.02:17,0,3	./.	0/0:16,0:15:9.47:0,9,105	0/0:20,0:20:0.47:0,0,1	0/0:27,0:27:2.87:0,3,15	1/1:22,1:22:2.03:6,2,0	./.	0/1:5,0:5:13.01:21,0,13	0/1:19,8:27:99:150,0,183	0/0:21,0:20:9.01:0,9,100	0/0:20,0:19:12.48:0,12,48	0/0:16,0:16:5.85:0,6,64	0/0:11,1:12:2.78:0,3,18	0/0:18,0:18:2.97:0,3,20	0/0:17,2:19:8.99:0,9,87	0/0:24,1:25:9.90:0,10,584	0/0:24,0:24:17.76:0,18,177	0/0:7,0:7:9.02:0,9,108
chr10	6851606	.	T	TA	204.89	PASS	AB=0.976;AC=18;AF=0.409;AN=44;BaseQRankSum=1.300;DP=386;FS=14.353;HRun=0;HaplotypeScore=128.3722;InbreedingCoeff=0.2403;MQ=32.44;MQ0=3;MQRankSum=-0.767;QD=1.23;ReadPosRankSum=-2.270;VQSLOD=1.4442;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:3.01:0,3,40	1/1:13,0:13:2.04:6,2,0	0/0:5,0:2:3.01:0,3,39	0/0:9,0:3:9.03:0,9,125	0/0:15,0:15:1.34:0,1,22	./.	1/1:5,0:6:5.98:68,6,0	0/1:34,2:35:99:105,0,257	./.	0/1:16,0:15:1.38:1,0,280	0/0:14,0:14:2.85:0,3,29	./.	0/1:13,0:12:0.26:0,0,28	1/1:18,0:18:0.47:1,0,0	0/0:27,0:27:2.99:0,3,24	./.	./.	0/0:5,0:5:6.56:0,7,53	0/1:22,1:22:80.66:82,0,81	1/1:8,0:7:3:25,3,0	0/0:20,0:19:15.02:0,15,144	1/1:15,0:15:0.47:1,0,0	1/1:13,0:13:2.84:9,3,0	./.	1/1:4,0:4:3:26,3,0	0/0:22,0:22:31.69:0,32,378	0/0:23,0:23:8.85:0,9,115	0/0:5,0:5:6.02:0,6,77
chr10	6851608	.	T	TA	35.80	PASS	AB=1.000;AC=11;AF=0.344;AN=32;BaseQRankSum=-0.210;DP=240;FS=1.520;HRun=0;HaplotypeScore=54.4454;InbreedingCoeff=0.2309;MQ=33.09;MQ0=3;MQRankSum=1.070;QD=0.63;ReadPosRankSum=-1.891;VQSLOD=1.3477;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:2,0:2:2.50:0,2,9	0/0:7,0:2:5.99:0,6,50	0/0:13,0:13:2.78:0,3,17	./.	0/1:6,0:5:0:0,0,0	0/0:19,0:18:25.17:0,25,179	./.	0/0:13,0:13:1.38:0,1,133	0/0:14,0:14:2.44:0,2,9	./.	1/1:3,2:4:2.99:24,3,0	1/1:8,1:9:2.99:24,3,0	0/0:24,0:24:2.94:0,3,18	./.	./.	0/0:5,0:5:2.96:0,3,19	0/1:18,0:18:11.48:11,0,45	./.	0/0:20,0:19:14.15:0,14,72	./.	1/1:2,4:6:3.48:31,3,0	./.	./.	1/1:8,0:8:4.55:31,5,0	0/1:5,0:5:18.98:19,0,25	./.
chr10	6851846	.	T	TA	117.57	PASS	AB=0.952;AC=16;AF=0.308;AN=52;BaseQRankSum=6.687;DP=961;FS=3.918;HRun=0;HaplotypeScore=244.7127;InbreedingCoeff=0.0527;MQ=34.55;MQ0=6;MQRankSum=-3.786;QD=0.28;ReadPosRankSum=-2.530;VQSLOD=2.3911;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,1:36:2.32:0,2,9	0/1:11,5:16:11.86:75,0,12	0/0:31,0:11:25.32:0,25,317	0/0:40,0:14:35.61:0,36,470	./.	0/1:27,1:27:15.03:15,0,37	0/1:37,0:37:1.61:2,0,6	0/0:40,0:36:81.25:0,81,1163	0/1:43,0:42:21.21:21,0,108	0/1:53,3:55:22.15:22,0,1350	0/1:21,5:26:0:0,0,0	0/1:41,0:40:23.47:23,0,73	0/0:47,0:47:29.48:0,29,390	0/0:41,0:41:8.51:0,9,89	1/1:46,1:46:2.61:45,3,0	0/0:38,0:37:9.14:0,9,105	0/1:17,0:16:5.51:6,0,53	0/1:12,0:12:29.47:29,0,228	0/0:29,0:25:46.87:0,47,747	0/0:31,1:32:1.80:0,2,5	0/0:35,0:32:2.93:0,3,42	./.	1/1:37,1:37:0.47:1,0,0	0/1:26,0:26:0:0,0,0	1/1:24,2:26:0.06:1,0,0	0/0:51,0:51:71.92:0,72,1459	0/0:28,1:28:33.86:0,34,509	0/0:11,0:11:18.91:0,19,152
chr10	6851849	.	A	AG	1533.89	PASS	AB=0.800;AC=23;AF=0.442;AN=52;BaseQRankSum=7.798;DP=1001;FS=3.286;HRun=0;HaplotypeScore=248.6289;InbreedingCoeff=-0.2620;MQ=34.87;MQ0=7;MQRankSum=-5.092;QD=2.25;ReadPosRankSum=0.993;VQSLOD=2.4585;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,3:37:2.19:0,2,8	1/1:10,0:16:3.61:26,4,0	0/0:36,0:14:38.46:0,38,433	0/0:45,0:18:42.10:0,42,563	./.	0/1:19,5:28:21.21:53,0,21	1/1:28,11:39:4.58:29,5,0	0/1:35,9:41:99:340,0,727	0/1:30,11:43:7.47:7,0,108	0/1:38,11:57:99:536,0,926	0/1:19,3:29:0:0,0,0	0/1:29,11:40:46.32:46,0,56	0/1:35,10:47:42.75:43,0,271	0/0:22,16:42:8.77:0,9,102	1/1:36,9:47:2.61:29,3,0	0/1:32,6:39:30.73:31,0,74	0/1:11,4:16:31.89:34,0,32	0/1:10,1:12:63.26:63,0,215	0/1:24,3:23:99:121,0,477	0/0:27,3:33:1.75:0,2,5	0/0:32,3:32:2.93:0,3,42	./.	0/1:25,8:37:0:0,0,0	0/1:18,5:26:0:0,0,0	0/1:21,3:29:0.27:1,0,0	0/1:38,12:52:99:236,0,1236	0/1:26,3:31:32.03:32,0,501	0/1:7,3:11:41.70:42,0,118
chr10	6851852	.	TGTGTA	T	220.58	PASS	AB=0.982;AC=19;AF=0.380;AN=50;BaseQRankSum=6.474;DP=1017;FS=0.000;HRun=0;HaplotypeScore=278.3282;InbreedingCoeff=-0.1050;MQ=36.02;MQ0=7;MQRankSum=-2.628;QD=0.41;ReadPosRankSum=-0.847;VQSLOD=1.8746;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:38,0:38:0.88:3,1,0	0/0:16,0:16:0.79:0,1,29	0/1:39,0:15:0.06:0,0,715	0/0:49,0:20:57.13:0,57,1304	./.	1/1:28,2:29:5.06:29,5,0	0/1:40,0:40:0.60:1,0,3	0/0:49,0:45:13.43:0,13,818	0/1:46,0:45:13.11:13,0,132	0/1:56,2:57:35.60:36,0,1016	0/0:28,1:29:0:0,0,0	0/1:37,1:37:55.18:62,0,55	0/0:46,1:47:33.88:0,34,323	0/1:42,0:42:19.98:20,0,54	1/1:49,0:48:3:38,3,0	0/0:40,0:39:0.78:0,1,94	0/1:17,0:16:19.11:19,0,44	0/1:12,0:12:9.52:10,0,176	0/0:23,0:21:12.77:0,13,584	1/1:35,0:35:1.94:38,2,0	0/0:35,0:32:3.01:0,3,69	./.	0/0:35,3:37:0.47:0,0,1	./.	0/0:29,0:29:0.51:0,1,2	0/1:55,1:55:38.84:39,0,2637	0/1:31,1:31:21.18:21,0,1184	0/1:9,1:10:21.52:22,0,181
chr10	6851858	.	G	GTA	478.92	PASS	AB=0.996;AC=23;AF=0.442;AN=52;BaseQRankSum=10.682;DP=1023;FS=9.840;HRun=0;HaplotypeScore=270.5183;InbreedingCoeff=0.1269;MQ=38.89;MQ0=8;MQRankSum=-6.184;QD=0.79;ReadPosRankSum=2.940;VQSLOD=0.7385;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:40,0:40:0:1,0,0	1/1:17,0:17:4.25:65,4,0	0/0:41,0:18:38.18:0,38,518	0/0:57,0:27:57.97:0,58,949	./.	1/1:30,0:29:4.80:28,5,0	1/1:43,0:43:0.29:1,0,0	0/0:41,0:38:30.82:0,31,673	0/0:49,0:48:6.55:0,7,123	0/1:55,0:55:99:291,0,916	./.	0/0:34,2:35:4.44:0,4,63	0/1:45,0:45:45.27:45,0,263	0/1:42,1:43:36.94:37,0,81	1/1:50,0:49:0.47:1,0,0	0/0:39,0:38:10.21:0,10,105	0/1:13,0:12:5:5,0,7	0/1:11,0:11:13.37:13,0,235	0/0:16,0:15:36.32:0,36,495	1/1:36,0:36:0.26:1,0,0	0/0:34,0:31:3.01:0,3,42	1/1:57,1:58:1.36:3,1,0	0/1:38,0:37:0:0,0,0	0/1:25,0:25:0:0,0,0	0/1:32,0:32:0.30:1,0,0	0/1:56,0:55:99:100,0,1449	0/0:31,0:30:26.20:0,26,606	0/1:10,0:10:12.53:13,0,82
chr10	6851862	.	GTA	G	1145.61	PASS	AB=0.961;AC=19;AF=0.365;AN=52;BaseQRankSum=10.872;DP=1035;FS=2.332;HRun=0;HaplotypeScore=268.6016;InbreedingCoeff=-0.0070;MQ=40.03;MQ0=6;MQRankSum=-6.927;QD=1.92;ReadPosRankSum=2.860;VQSLOD=1.7114;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:41,0:41:0.01:0,0,0	1/1:17,1:18:7.26:81,7,0	0/0:40,0:19:36.23:0,36,718	0/0:62,2:32:55.82:0,56,1362	./.	1/1:26,4:29:2.33:34,2,0	0/1:41,1:42:3.67:9,0,4	0/1:39,0:35:99:138,0,543	0/1:48,1:48:0.80:1,0,112	0/1:51,4:54:99:489,0,711	./.	0/1:38,0:37:14.18:14,0,67	0/1:45,1:46:99:124,0,203	0/0:42,2:44:5.65:0,6,82	1/1:45,3:47:2.85:33,3,0	0/0:40,1:40:0.45:0,0,86	0/0:13,0:12:2.24:0,2,8	0/1:10,1:11:54:54,0,175	0/0:17,0:17:26.81:0,27,488	0/0:31,5:36:1.81:0,2,5	0/0:35,0:32:2.92:0,3,20	1/1:56,2:58:3.37:9,3,0	0/0:35,2:36:0.47:0,0,1	0/0:23,0:23:0:0,0,0	0/1:25,8:33:0.43:0,0,1	0/1:56,1:57:99:258,0,1803	0/1:33,0:32:30.83:31,0,770	0/0:11,1:12:1.46:0,1,145
chr10	6851870	.	TGTGTATGTA	T	10640.70	PASS	AB=0.811;AC=39;AF=0.750;AN=52;BaseQRankSum=8.771;DP=1061;FS=10.471;HRun=0;HaplotypeScore=283.0264;InbreedingCoeff=0.2522;MQ=41.56;MQ0=14;MQRankSum=-7.943;QD=12.74;ReadPosRankSum=2.463;VQSLOD=2.2198;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:9,31:39:0:0,0,0	1/1:7,10:17:7.18:115,7,0	0/0:49,0:27:74.71:0,75,1640	0/0:72,0:40:99:0,103,2750	./.	1/1:15,14:28:2.83:74,3,0	1/1:17,24:41:7.82:60,8,0	1/1:10,25:33:80.58:1860,81,0	1/1:20,31:48:4.70:202,5,0	1/1:37,21:57:99:3773,160,0	0/1:14,19:33:0:0,0,0	1/1:23,15:37:17.99:326,18,0	1/1:29,23:51:51.72:1017,52,0	1/1:24,21:45:11.40:288,11,0	1/1:20,25:43:2.61:96,3,0	1/1:13,27:39:2.49:93,2,0	1/1:9,2:9:14.19:270,14,0	1/1:5,9:14:15.81:585,16,0	0/1:14,4:17:99:475,0,182	1/1:14,22:36:4.78:17,5,0	1/1:32,5:34:5.58:104,6,0	1/1:42,17:59:6.02:180,6,0	0/0:25,11:35:0.47:0,0,1	./.	0/1:19,15:34:0.72:1,0,1	0/1:58,2:60:99:762,0,4486	0/1:29,0:28:99:165,0,1923	0/1:13,0:13:99:176,0,536
chr10	6851873	.	GTA	G	1138.33	PASS	AB=0.965;AC=24;AF=0.462;AN=52;BaseQRankSum=12.178;DP=1049;FS=22.601;HRun=0;HaplotypeScore=271.5981;InbreedingCoeff=0.1799;MQ=41.91;MQ0=18;MQRankSum=-10.374;QD=1.89;ReadPosRankSum=5.540;VQSLOD=0.6755;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:38,1:38:0.01:0,0,0	1/1:17,0:17:7.19:45,7,0	0/0:49,0:28:78.16:0,78,1268	0/0:74,0:42:99:0,100,1748	./.	1/1:26,3:28:4.87:41,5,0	1/1:34,5:39:2.85:18,3,0	0/1:34,0:32:55.27:174,0,55	1/1:49,3:48:10.66:64,11,0	0/1:53,5:57:99:532,0,232	0/0:33,0:33:0:0,0,0	0/1:34,3:35:34.10:34,0,57	0/1:46,3:48:86.86:87,0,171	1/1:43,0:43:11.22:68,11,0	1/1:40,3:42:2.90:16,3,0	1/1:35,2:36:3.02:16,3,0	0/0:11,2:11:0.52:0,1,107	1/1:14,0:14:10.39:84,10,0	0/1:14,0:13:34.74:35,0,184	0/0:33,2:34:2.53:0,3,12	0/0:39,1:37:5.35:0,5,78	0/0:55,4:59:8.38:0,8,51	0/0:31,4:34:0.47:0,0,1	./.	0/1:34,1:34:0.43:0,0,1	0/1:61,1:62:73.01:73,0,2115	0/0:28,1:28:8.91:0,9,899	0/0:13,0:13:1.96:0,2,328
chr10	6851879	.	A	AGT	5225.07	PASS	AB=0.926;AC=41;AF=0.788;AN=52;BaseQRankSum=8.775;DP=991;FS=4.844;HRun=0;HaplotypeScore=266.7484;InbreedingCoeff=0.2347;MQ=42.18;MQ0=19;MQRankSum=-4.906;QD=6.43;ReadPosRankSum=-2.589;VQSLOD=3.8383;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:38,1:38:2.90:17,3,0	1/1:17,0:17:8.51:89,9,0	0/0:53,0:29:57.45:0,57,828	0/0:63,0:38:71.64:0,72,1097	./.	1/1:27,1:28:5.98:101,6,0	1/1:32,1:34:6.43:46,6,0	1/1:28,0:27:64.71:811,65,0	1/1:44,3:44:15.26:103,15,0	1/1:45,11:58:78.71:1400,79,0	0/1:30,0:30:0:0,0,0	1/1:29,5:34:14.91:234,15,0	1/1:37,7:47:36.86:531,37,0	1/1:36,0:37:7.08:93,7,0	1/1:32,2:37:3.01:38,3,0	0/1:31,2:33:1.52:9,0,2	1/1:6,5:11:23.65:359,24,0	1/1:11,0:13:8.40:108,8,0	0/1:10,4:13:99:163,0,100	1/1:29,2:31:2.29:12,2,0	1/1:27,10:36:18.46:316,18,0	1/1:43,11:56:18.04:275,18,0	1/1:25,6:31:2.99:24,3,0	./.	0/1:28,3:31:0.33:0,0,0	0/1:63,0:64:99:321,0,1524	0/1:27,1:27:83.20:83,0,588	0/1:13,0:14:91.96:92,0,272
chr10	6851884	.	GTA	G	267.80	PASS	AB=0.967;AC=8;AF=0.148;AN=54;BaseQRankSum=9.708;DP=1036;FS=5.975;HRun=0;HaplotypeScore=292.3479;InbreedingCoeff=0.0510;MQ=41.16;MQ0=17;MQRankSum=-7.084;QD=1.07;ReadPosRankSum=-0.055;VQSLOD=1.7956;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:40:13.49:0,13,186	1/1:16,1:17:7.02:66,7,0	0/0:56,0:28:69.07:0,69,1226	0/0:65,0:41:96.14:0,96,1745	0/0:37,5:42:5.99:0,6,49	0/1:24,4:28:31.47:47,0,31	0/0:33,1:35:2.56:0,3,26	0/0:31,0:30:72.99:0,73,610	0/0:51,0:47:10.65:0,11,71	0/1:58,3:60:99:171,0,433	0/0:29,3:32:6.01:0,6,64	0/0:38,0:36:3.54:0,4,134	0/0:49,0:48:29.98:0,30,301	0/1:38,0:38:2.69:24,0,3	0/0:43,0:42:8.21:0,8,57	0/0:36,0:35:4.87:0,5,32	0/0:15,0:14:24.32:0,24,262	0/1:14,0:14:20.03:20,0,21	0/0:15,0:14:30.26:0,30,257	0/0:30,3:32:5.15:0,5,31	0/0:44,0:41:29.59:0,30,277	0/0:56,2:58:21.03:0,21,217	0/0:32,2:33:8.99:0,9,89	./.	0/0:26,7:32:5.60:0,6,107	0/1:63,2:65:55.37:55,0,2345	0/1:27,0:26:15.13:15,0,895	0/0:14,0:14:21.68:0,22,461
chr10	6852104	.	AT	A	9163.66	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=9.820;DP=656;FS=10.026;HRun=8;HaplotypeScore=87.8434;InbreedingCoeff=0.9982;MQ=60.34;MQ0=0;MQRankSum=-2.662;QD=23.68;ReadPosRankSum=1.325;VQSLOD=4.9692;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,39:43:99:1043,108,0	1/1:3,9:12:24.04:232,24,0	0/0:7,0:7:18.05:0,18,206	0/0:13,0:12:24.06:0,24,275	1/1:4,33:37:50.89:774,51,0	0/0:23,0:23:60.17:0,60,714	0/0:14,0:14:33.09:0,33,387	1/1:3,34:37:99:980,102,0	0/0:19,0:19:54.15:0,54,640	1/1:6,23:29:69.11:665,69,0	1/1:1,25:26:63.05:599,63,0	1/1:6,10:16:30.04:290,30,0	1/1:2,22:24:63.10:608,63,0	1/1:1,22:23:66.11:637,66,0	1/1:1,20:21:57.09:550,57,0	0/0:21,0:21:51.15:0,51,606	0/0:34,0:34:87.23:0,87,1018	1/1:5,27:31:77.71:734,78,0	0/0:21,0:21:48.15:0,48,580	0/0:27,0:27:78.05:0,78,869	1/1:3,15:18:42.06:406,42,0	1/1:3,23:26:66.11:637,66,0	1/1:2,24:26:68.93:642,69,0	1/1:3,14:17:39.01:367,39,0	0/0:16,0:16:45.06:0,45,516	0/0:29,0:29:81.24:0,81,970	0/0:29,0:29:81.23:0,81,966	0/0:16,0:16:42.06:0,42,489
chr10	6854191	.	A	AT	7500.78	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-13.370;DP=549;FS=9.464;HRun=0;HaplotypeScore=51.9234;InbreedingCoeff=0.9994;MQ=76.38;MQ0=1;MQRankSum=-3.739;QD=35.55;ReadPosRankSum=1.624;VQSLOD=3.6422;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,132,1824	0/0:13,0:13:39.13:0,39,544	0/0:22,0:20:56.65:0,57,675	0/0:14,0:14:22.83:0,23,334	0/0:24,0:24:69.19:0,69,912	1/1:0,16:16:48.16:685,48,0	1/1:1,17:18:45.14:643,45,0	0/0:22,0:22:63.18:0,63,820	1/1:1,21:22:48.15:686,48,0	0/0:20,0:20:57.18:0,57,768	0/0:16,0:16:45.12:0,45,595	0/0:22,0:22:66.20:0,66,890	0/0:9,0:9:27.08:0,27,359	0/0:15,0:15:45.14:0,45,598	0/0:23,0:23:66.16:0,66,870	1/1:0,12:12:33.11:469,33,0	1/1:2,22:24:57.18:814,57,0	0/0:12,0:12:36.12:0,36,502	1/1:2,17:19:50.43:608,50,0	1/1:0,23:23:65.97:845,66,0	0/0:25,0:25:72.15:0,72,946	0/0:18,0:18:54.17:0,54,724	0/0:18,0:18:54.17:0,54,738	0/0:21,0:21:60.14:0,60,783	1/1:0,14:14:39.13:557,39,0	1/1:0,21:21:63.18:864,63,0	1/1:0,22:22:57.19:814,57,0	1/1:3,17:20:36.10:514,36,0
chr10	6854790	.	TACACACACACACAC	T	1854.82	PASS	AB=0.843;AC=14;AF=0.259;AN=54;BaseQRankSum=2.843;DP=594;FS=1.306;HRun=0;HaplotypeScore=189.4129;InbreedingCoeff=0.5684;MQ=58.13;MQ0=34;MQRankSum=-3.856;QD=11.67;ReadPosRankSum=1.603;VQSLOD=2.4611;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:33.88:0,34,701	0/0:7,0:7:9.03:0,9,318	0/0:49,0:24:0:0,0,0	./.	0/0:18,0:23:21.07:0,21,694	1/1:10,8:18:6.02:215,6,0	1/1:21,8:27:1.57:190,2,0	0/0:14,0:14:18.04:0,18,304	0/1:16,2:18:4.14:336,0,4	0/0:20,0:18:21.07:0,21,713	0/0:11,0:7:12.04:0,12,414	0/0:17,0:22:27.56:0,28,767	0/0:14,0:12:12.92:0,13,207	0/0:15,0:18:18.06:0,18,510	0/0:15,0:22:24.08:0,24,973	1/1:10,5:16:12.98:450,13,0	0/1:16,6:20:96.59:331,0,97	0/0:19,0:21:34.93:0,35,810	1/1:19,0:18:2.28:19,2,0	1/1:17,3:14:3.01:117,3,0	0/0:31,0:32:24.08:0,24,922	0/0:17,0:17:24:0,24,484	0/0:10,0:9:3.01:0,3,95	0/0:36,0:37:33.58:0,34,809	1/1:11,5:16:9.03:351,9,0	0/0:10,0:10:17.99:0,18,452	0/0:0,0:2:3.90:0,4,105	0/0:4,0:3:6.02:0,6,229
chr10	6855129	.	C	CTT	4321.30	PASS	AB=0.674;AC=22;AF=0.393;AN=56;BaseQRankSum=1.371;DP=580;FS=0.000;HRun=11;HaplotypeScore=92.0985;InbreedingCoeff=0.6892;MQ=65.72;MQ0=7;MQRankSum=-2.787;QD=15.11;ReadPosRankSum=1.988;VQSLOD=3.5837;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,0:27:8.84:91,9,0	0/0:4,0:4:9:0,9,87	0/0:20,0:17:14.58:0,15,197	0/0:20,0:16:5.87:0,6,117	0/0:27,0:28:59.37:0,59,522	1/1:2,13:16:35.56:463,36,0	1/1:8,18:26:9.99:470,10,0	0/0:27,0:27:54.93:0,55,536	1/1:11,14:25:35.95:631,36,0	0/0:20,0:22:41.19:0,41,356	0/0:17,0:17:32.98:0,33,308	0/0:17,0:19:46.43:0,46,471	0/0:12,0:12:30:0,30,290	0/0:8,0:11:20.42:0,20,218	0/0:26,0:26:42.38:0,42,403	1/1:4,13:20:41.53:485,42,0	1/1:3,15:18:39.13:557,39,0	0/0:19,0:23:38.38:0,38,377	1/1:14,10:25:44.52:531,45,0	1/1:4,14:19:38.49:439,38,0	0/1:18,0:21:1.42:1,0,303	0/0:21,0:21:40.89:0,41,386	0/0:14,0:17:35.49:0,35,315	0/0:23,0:21:41.98:0,42,407	1/1:5,8:15:26.57:341,27,0	0/1:11,2:33:24.85:187,0,25	0/1:10,1:24:21.82:99,0,22	0/1:3,0:13:22.65:25,0,23
chr10	6855572	.	TTTTG	T	1996.45	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=10.459;DP=451;FS=5.733;HRun=0;HaplotypeScore=81.5360;InbreedingCoeff=0.7286;MQ=68.47;MQ0=1;MQRankSum=-2.782;QD=10.34;ReadPosRankSum=-1.084;VQSLOD=2.0436;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:36,5:41:71.71:662,72,0	0/0:4,0:4:9.01:0,9,158	0/0:22,0:15:24.89:0,25,394	0/0:24,0:14:18:0,18,252	0/0:21,0:21:54.04:0,54,1046	1/1:13,1:14:29.49:226,29,0	1/1:19,0:19:34.79:241,35,0	0/0:30,0:29:81.19:0,81,1603	1/1:13,0:13:1.25:3,1,0	0/0:12,0:12:36.11:0,36,775	0/0:16,0:16:36.58:0,37,805	0/0:9,0:9:24.04:0,24,526	0/0:13,0:13:33.04:0,33,616	0/0:8,0:8:24.08:0,24,573	0/0:15,0:15:45.14:0,45,999	1/1:8,1:9:19.59:163,20,0	1/1:22,0:22:52.43:331,52,0	0/0:27,0:27:69.07:0,69,1447	1/1:17,0:16:37.61:266,38,0	1/1:9,1:10:17.43:110,17,0	0/0:17,0:17:45.12:0,45,1012	0/0:6,0:6:18.06:0,18,375	0/0:11,0:11:24.01:0,24,550	0/0:23,0:22:63.15:0,63,1287	1/1:7,0:7:14.67:94,15,0	0/1:19,0:18:38.10:58,0,38	0/1:13,0:13:34.73:35,0,56	0/1:9,0:8:14.16:14,0,26
chr10	6855573	.	TTTG	T	4296.37	PASS	AB=1.000;AC=22;AF=0.393;AN=56;BaseQRankSum=9.629;DP=446;FS=1.366;HRun=0;HaplotypeScore=65.7383;InbreedingCoeff=0.8215;MQ=68.41;MQ0=1;MQRankSum=-3.952;QD=22.49;ReadPosRankSum=-2.305;VQSLOD=3.9919;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:30,12:42:99:1090,106,0	0/0:4,0:4:8.98:0,9,138	0/0:22,0:15:22.08:0,22,314	0/0:24,0:13:18.59:0,19,211	0/0:21,0:21:54.03:0,54,886	1/1:2,12:14:30.08:440,30,0	1/1:5,13:18:38.96:542,39,0	0/0:30,0:29:81.16:0,81,1365	1/1:13,0:13:2.92:17,3,0	0/0:12,0:12:36.05:0,36,630	0/0:16,0:16:36.10:0,36,660	0/0:9,0:9:24.03:0,24,436	0/0:12,0:12:33.05:0,33,517	0/0:8,0:8:24.08:0,24,471	0/0:15,0:15:45.14:0,45,824	1/1:5,4:9:24.01:296,24,0	1/1:12,10:22:62.72:752,63,0	0/0:26,0:26:69.06:0,69,1225	1/1:13,4:16:41.99:475,42,0	1/1:1,8:9:17.89:165,18,0	0/0:17,0:17:45.09:0,45,823	0/0:6,0:6:18.04:0,18,304	0/0:11,0:11:23.99:0,24,461	0/0:22,0:21:63.13:0,63,1044	1/1:0,7:7:14.94:208,15,0	1/1:19,0:18:31.98:217,32,0	0/1:12,0:12:9.45:76,0,9	0/1:9,0:8:12.63:19,0,13
chr10	6855574	.	TTG	T	3540.17	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=10.823;DP=441;FS=0.000;HRun=0;HaplotypeScore=59.9663;InbreedingCoeff=0.9441;MQ=68.14;MQ0=1;MQRankSum=-4.379;QD=18.63;ReadPosRankSum=-2.397;VQSLOD=2.4877;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:40,1:41:99:821,101,0	0/0:4,0:4:8.98:0,9,112	0/0:22,0:15:15.65:0,16,239	0/0:22,0:11:16.28:0,16,148	0/0:20,0:20:53.93:0,54,688	1/1:13,1:14:30.05:293,30,0	1/1:16,2:18:39.07:399,39,0	0/0:31,0:30:84.01:0,84,1124	1/1:0,13:13:3.01:43,3,0	0/0:12,0:12:36.05:0,36,509	0/0:15,0:15:36.12:0,36,531	0/0:9,0:9:24.03:0,24,350	0/0:12,0:12:33.03:0,33,418	0/0:8,0:8:24.08:0,24,373	0/0:15,0:15:45.12:0,45,651	1/1:9,0:9:23.98:214,24,0	1/1:20,2:22:62.85:576,63,0	0/0:25,0:25:72.08:0,72,1012	1/1:16,1:16:41.94:361,42,0	1/1:9,0:9:17.82:127,18,0	0/0:17,0:17:48.10:0,48,681	0/0:6,0:6:18.04:0,18,246	0/0:11,0:11:23.97:0,24,370	0/0:22,0:21:63.11:0,63,840	1/1:7,0:7:14.96:133,15,0	1/1:19,0:18:45.07:321,45,0	1/1:11,1:12:18.37:211,18,0	1/1:9,0:8:6.78:42,7,0
chr10	6855575	.	TG	T	3099.31	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=10.520;DP=435;FS=0.400;HRun=1;HaplotypeScore=51.9802;InbreedingCoeff=0.9408;MQ=65.99;MQ0=1;MQRankSum=-4.033;QD=16.31;ReadPosRankSum=-2.282;VQSLOD=2.8794;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:39,2:41:99:753,103,0	0/0:3,0:3:9.01:0,9,88	0/0:21,1:14:8.72:0,9,200	0/0:21,0:10:18.16:0,18,123	0/0:19,0:19:53.87:0,54,543	1/1:14,0:14:29.83:222,30,0	1/1:16,2:18:38.85:300,39,0	0/0:31,0:30:83.94:0,84,899	1/1:13,0:13:3:25,3,0	0/0:12,0:12:36.03:0,36,400	0/0:15,0:15:35.92:0,36,388	0/0:8,0:8:24.06:0,24,274	0/0:12,0:12:33.03:0,33,343	0/0:8,0:8:24.07:0,24,285	0/0:15,0:15:45.11:0,45,512	1/1:9,0:9:23.89:184,24,0	1/1:19,2:21:62.68:487,63,0	0/0:24,0:24:72.09:0,72,798	1/1:15,2:16:41.82:332,42,0	1/1:9,0:9:17.65:116,18,0	0/0:16,0:16:48.09:0,48,525	0/0:6,0:6:18.02:0,18,190	0/0:8,0:8:24.07:0,24,285	0/0:23,0:22:66.06:0,66,686	1/1:7,0:7:14.91:110,15,0	1/1:0,19:18:47.93:441,48,0	1/1:12,1:13:34.25:282,34,0	1/1:8,1:8:7.55:69,8,0
chr10	6855694	.	GT	G	1823.96	PASS	AB=0.990;AC=31;AF=0.574;AN=54;BaseQRankSum=3.536;DP=398;FS=6.963;HRun=10;HaplotypeScore=71.3185;InbreedingCoeff=0.3218;MQ=84.26;MQ0=1;MQRankSum=-2.858;QD=6.33;ReadPosRankSum=1.074;VQSLOD=1.2665;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,17:23:59.83:499,60,0	0/1:6,0:6:10.48:10,0,21	0/0:39,0:22:43.53:0,44,379	0/1:42,0:21:2.94:3,0,50	0/1:25,0:25:20.15:20,0,94	1/1:2,4:7:11.78:91,12,0	1/1:6,12:20:31.35:224,31,0	0/0:19,0:18:31.67:0,32,116	1/1:1,4:6:14.36:111,14,0	0/1:18,0:18:18.35:18,0,64	0/1:14,0:14:18.22:18,0,50	0/0:12,0:12:14.83:0,15,56	0/1:9,0:9:8.06:8,0,31	0/1:5,0:5:13.89:16,0,14	0/1:10,0:10:6.70:7,0,30	1/1:0,3:3:9:77,9,0	1/1:13,13:25:41.28:330,41,0	0/1:19,2:21:70.97:71,0,73	1/1:7,5:12:18.98:139,19,0	1/1:2,7:10:19.73:145,20,0	0/0:15,0:15:7.98:0,8,91	0/0:2,0:2:2.37:0,2,8	0/0:8,0:8:16.24:0,16,67	0/0:13,0:13:24.99:0,25,93	1/1:3,2:6:13.98:99,14,0	1/1:1,0:14:24.44:72,24,0	1/1:1,0:9:16.94:54,17,0	./.
chr10	6855739	.	G	GTT	2556.63	PASS	AB=1.000;AC=25;AF=0.446;AN=56;BaseQRankSum=1.395;DP=375;FS=1.163;HRun=13;HaplotypeScore=77.8779;InbreedingCoeff=0.8049;MQ=71.61;MQ0=7;MQRankSum=-3.555;QD=13.67;ReadPosRankSum=-1.459;VQSLOD=2.3537;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,16:26:28.69:514,29,0	0/0:9,0:9:23.98:0,24,211	0/1:16,0:14:17.24:33,0,17	0/0:18,0:11:5.69:0,6,46	0/0:19,0:19:47.92:0,48,415	1/1:4,7:12:24.07:314,24,0	1/1:8,4:13:11.53:131,12,0	0/0:25,0:22:41.60:0,42,355	1/1:3,2:5:8.70:92,9,0	0/0:16,0:17:28.81:0,29,288	0/0:19,0:18:26.77:0,27,238	0/0:10,0:10:14.54:0,15,131	0/0:7,0:6:11.66:0,12,91	0/0:6,0:6:8.94:0,9,79	0/0:9,0:9:14.93:0,15,132	1/1:3,1:4:6.01:65,6,0	1/1:10,15:29:38.08:442,38,0	0/0:17,0:17:29.89:0,30,264	1/1:1,7:9:23.55:269,24,0	1/1:7,3:11:17.90:154,18,0	0/0:3,0:3:2.98:0,3,23	0/0:2,0:3:5.74:0,6,38	0/0:12,0:12:20.88:0,21,185	0/0:12,0:12:20.89:0,21,181	1/1:6,3:9:6.02:82,6,0	1/1:18,1:22:16.02:370,16,0	1/1:7,0:16:20.52:179,21,0	1/1:2,2:8:12.02:126,12,0
chr10	6855941	.	T	TA	2652.55	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=15.213;DP=566;FS=2.894;HRun=1;HaplotypeScore=99.3363;InbreedingCoeff=0.9733;MQ=66.09;MQ0=0;MQRankSum=-0.698;QD=10.20;ReadPosRankSum=3.469;VQSLOD=1.8307;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:49,1:48:56.91:445,57,0	0/0:6,0:6:18.05:0,18,221	0/0:22,0:17:30.05:0,30,352	0/0:25,0:24:56.10:0,56,766	0/0:27,0:27:78.22:0,78,970	1/1:18,1:18:14.96:199,15,0	1/1:16,0:16:35.07:159,35,0	0/0:26,0:26:78.13:0,78,920	1/1:17,0:16:25.26:150,25,0	0/0:26,0:26:75.23:0,75,940	0/0:12,0:12:36.10:0,36,451	0/0:13,0:13:36.10:0,36,442	0/0:17,0:17:48.01:0,48,556	0/0:16,0:16:48.13:0,48,592	0/0:20,0:20:51.14:0,51,633	1/1:20,1:21:44.40:299,44,0	1/1:37,0:37:73.47:387,73,0	0/0:20,0:20:45.13:0,45,567	1/1:9,1:10:18.23:151,18,0	1/1:20,0:20:28.48:269,28,0	0/0:34,0:34:87.21:0,87,1046	0/0:5,0:5:12.04:0,12,155	0/0:11,0:11:33.10:0,33,415	0/0:26,0:26:53.81:0,54,606	1/1:16,0:16:30.85:195,31,0	1/1:27,0:26:51.14:310,51,0	1/1:24,0:24:46.40:296,46,0	1/1:3,0:2:4.99:18,5,0
chr10	6857155	.	A	AC	1021.20	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.863;DP=564;FS=13.347;HRun=1;HaplotypeScore=71.0973;InbreedingCoeff=0.8218;MQ=49.08;MQ0=22;MQRankSum=-3.998;QD=26.87;ReadPosRankSum=-0.385;VQSLOD=2.0900;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,29:33:81.14:1115,81,0	0/0:5,0:4:6.02:0,6,78	1/1:4,0:1:2.04:6,2,0	0/0:23,0:7:18.05:0,18,215	0/0:22,0:19:36.10:0,36,453	0/0:17,0:17:48.16:0,48,623	0/0:25,0:24:63.16:0,63,798	0/0:36,0:35:99:0,99,1266	0/0:21,0:20:60.20:0,60,778	0/0:23,0:22:60.19:0,60,777	0/0:15,0:13:30.10:0,30,389	0/0:22,0:21:51.15:0,51,648	0/0:23,0:23:60.19:0,60,779	0/0:22,0:21:51.15:0,51,647	0/0:25,0:25:63.20:0,63,818	0/0:13,0:13:36.10:0,36,441	0/0:21,0:20:54.15:0,54,678	0/0:23,0:21:54.18:0,54,701	0/0:18,0:15:45.13:0,45,567	0/0:17,0:16:48.14:0,48,609	0/0:33,0:33:87.16:0,87,1091	0/0:13,0:12:29.61:0,30,389	0/0:19,0:17:35.87:0,36,464	0/0:32,0:32:69.19:0,69,866	0/0:16,0:15:42.14:0,42,544	0/0:11,0:11:33.11:0,33,429	0/0:26,0:23:63.20:0,63,818	0/0:5,0:5:12.04:0,12,156
chr10	6857376	.	G	GAA	2363.60	PASS	AB=1.000;AC=43;AF=0.860;AN=50;BaseQRankSum=0.441;DP=304;FS=3.033;HRun=14;HaplotypeScore=88.4616;InbreedingCoeff=0.3867;MQ=42.08;MQ0=37;MQRankSum=-1.363;QD=8.32;ReadPosRankSum=-1.147;VQSLOD=1.5385;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:9:8.10:42,8,0	./.	./.	0/0:7,0:3:2.97:0,3,24	1/1:25,0:23:24.13:213,24,0	1/1:2,1:3:6.01:68,6,0	0/1:7,0:6:0:0,0,0	1/1:13,0:9:27.05:273,27,0	./.	1/1:23,0:22:29.99:287,30,0	1/1:15,0:12:7.37:68,7,0	1/1:13,0:8:8.96:76,9,0	0/1:5,0:5:0:0,0,0	1/1:7,0:5:0.47:1,0,0	1/1:10,0:10:6.01:65,6,0	0/1:6,0:4:0:0,0,0	1/1:10,1:9:5.97:49,6,0	0/1:8,0:6:10.80:64,0,11	1/1:8,0:6:9.46:91,9,0	1/1:16,2:20:26.51:211,27,0	1/1:9,0:7:6.01:65,6,0	1/1:8,0:7:11.97:106,12,0	1/1:17,0:17:32.30:291,32,0	0/1:11,0:9:0:0,0,0	1/1:5,4:11:21.05:232,21,0	1/1:15,0:14:17.60:134,18,0	1/1:13,0:12:8.93:66,9,0	1/1:7,0:5:6.90:59,7,0
chr10	6857492	.	AGACCC	A	1128.16	PASS	AB=0.941;AC=17;AF=0.340;AN=50;BaseQRankSum=6.364;DP=303;FS=54.930;HRun=0;HaplotypeScore=83.3316;InbreedingCoeff=0.3939;MQ=33.85;MQ0=22;MQRankSum=-0.156;QD=9.81;ReadPosRankSum=-1.708;VQSLOD=-0.5459;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,2:7:20.40:247,20,0	0/0:7,0:6:14.47:0,14,140	./.	0/0:32,1:5:10.40:0,10,93	0/1:20,2:18:33.58:34,0,264	1/1:4,0:4:8.24:35,8,0	0/1:5,0:4:6.52:36,0,7	0/0:9,0:7:11.60:0,12,98	./.	0/1:11,1:10:61.91:62,0,138	0/0:12,0:10:2.12:0,2,94	0/0:9,0:9:6.87:0,7,147	0/0:10,1:11:12.57:0,13,102	0/0:5,0:5:3.01:0,3,42	0/0:7,0:7:5.92:0,6,65	./.	1/1:10,2:9:15.20:236,15,0	0/0:14,1:13:21.91:0,22,217	1/1:11,1:10:18.21:126,18,0	1/1:13,0:12:24.81:167,25,0	0/1:4,0:3:2.06:2,0,26	0/0:2,0:2:2.92:0,3,17	0/1:11,2:11:26.45:138,0,26	0/0:2,0:2:0.70:0,1,13	1/1:10,0:9:23.51:212,24,0	0/0:14,0:11:28.25:0,28,317	0/0:22,0:20:40.82:0,41,546	0/0:10,0:9:1.04:0,1,41
chr10	6857502	.	A	ACC	204.72	PASS	AB=0.882;AC=9;AF=0.180;AN=50;BaseQRankSum=3.380;DP=397;FS=4.308;HRun=0;HaplotypeScore=94.3919;InbreedingCoeff=-0.0874;MQ=36.40;MQ0=31;MQRankSum=-0.656;QD=2.56;ReadPosRankSum=-0.678;VQSLOD=1.4133;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:7:2.93:0,3,104	0/0:6,0:5:8.99:0,9,93	0/0:45,0:2:5.19:0,5,26	0/0:56,0:12:18.35:0,18,165	0/0:24,0:22:47.59:0,48,488	0/1:3,1:4:4.45:4,0,44	0/1:6,0:5:31.70:32,0,54	0/0:16,0:14:34.11:0,34,324	./.	0/0:18,0:15:40.04:0,40,413	0/0:12,0:9:17.88:0,18,192	0/0:9,0:9:22.77:0,23,218	0/0:11,0:11:24.03:0,24,247	0/1:6,0:6:2.68:3,0,34	0/0:10,0:9:13.59:0,14,151	./.	0/1:9,1:10:51.68:75,0,52	0/0:19,0:15:30.59:0,31,354	0/1:16,1:14:43.32:43,0,156	0/1:16,1:17:32.97:33,0,125	0/0:5,0:4:8.76:0,9,79	./.	0/0:15,0:13:21:0,21,206	1/1:3,0:3:0.89:2,1,0	0/1:9,3:12:70.05:130,0,70	0/0:25,0:21:57.14:0,57,681	0/0:21,0:19:48.11:0,48,609	0/0:13,0:11:12.04:0,12,164
chr10	6857514	.	ATT	A	1316.04	PASS	AB=0.828;AC=15;AF=0.278;AN=54;BaseQRankSum=5.801;DP=436;FS=9.066;HRun=2;HaplotypeScore=82.0977;InbreedingCoeff=0.3618;MQ=44.86;MQ0=32;MQRankSum=-4.649;QD=7.65;ReadPosRankSum=3.497;VQSLOD=0.1226;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:10:12.16:85,12,0	0/0:4,0:4:5.91:0,6,47	0/1:50,0:4:0.20:0,0,50	0/0:61,0:15:23.83:0,24,175	0/0:20,2:21:23.59:0,24,310	1/1:2,3:5:1.36:130,1,0	1/1:9,2:10:15.88:128,16,0	0/0:24,0:23:65.12:0,65,613	0/1:1,1:2:3:20,0,3	0/0:15,2:14:36.18:0,36,315	0/0:11,0:8:14.59:0,15,109	0/1:7,1:8:16.86:17,0,110	0/0:10,0:10:18.44:0,18,133	0/0:7,0:7:9.02:0,9,103	0/0:11,0:10:16.53:0,17,129	./.	0/1:7,5:9:28.88:163,0,29	0/0:16,1:13:22.56:0,23,221	0/1:14,8:19:14.72:267,0,15	1/1:11,11:21:14.84:429,15,0	0/0:6,0:5:11.44:0,11,90	0/0:4,0:4:9.02:0,9,88	0/1:13,0:11:6.65:7,0,154	0/0:3,1:4:3.01:0,3,32	0/1:12,4:15:2.29:231,0,2	0/0:28,1:25:56.58:0,57,664	0/0:19,0:18:42.20:0,42,372	0/0:14,0:13:17.63:0,18,204
chr10	6857516	.	T	TA	596.73	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=7.636;DP=444;FS=9.576;HRun=13;HaplotypeScore=82.5423;InbreedingCoeff=0.6802;MQ=46.86;MQ0=30;MQRankSum=-6.585;QD=2.74;ReadPosRankSum=3.301;VQSLOD=-0.6308;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,9:11:17.31:158,17,0	0/0:4,0:4:5.46:0,5,28	0/1:50,0:6:7.75:26,0,8	0/1:59,0:15:3.82:8,0,4	0/0:23,0:22:11.70:0,12,126	1/1:5,0:5:12.98:52,13,0	1/1:10,0:10:23.04:105,23,0	0/0:24,0:23:43.23:0,43,302	1/1:3,0:3:8.17:36,8,0	0/0:17,0:14:26.27:0,26,160	0/0:11,0:8:11.82:0,12,76	0/0:8,0:8:11.82:0,12,78	0/0:10,0:10:14.25:0,14,82	0/0:7,0:7:8.88:0,9,57	0/0:12,0:11:9.81:0,10,52	0/1:4,0:2:0:0,0,0	1/1:12,0:9:12.06:44,12,0	0/0:17,0:13:14.76:0,15,96	1/1:22,0:19:21.98:86,22,0	1/1:22,0:21:40.91:163,41,0	0/0:6,0:5:5.93:0,6,39	0/0:6,0:6:9.37:0,9,48	0/0:14,0:12:12.67:0,13,79	0/0:4,0:4:2.97:0,3,20	1/1:16,0:15:26.32:108,26,0	0/0:29,0:25:13.13:0,13,206	0/0:19,0:18:0.18:0,0,101	0/0:15,0:13:6.02:0,6,91
chr10	6857525	.	A	AAAC	3443.37	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=0.125;DP=461;FS=2.356;HRun=0;HaplotypeScore=100.3987;InbreedingCoeff=0.8330;MQ=51.26;MQ0=20;MQRankSum=-5.973;QD=20.62;ReadPosRankSum=1.914;VQSLOD=3.7781;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:14:26.08:0,26,158	0/0:4,0:4:6.02:0,6,88	0/0:39,0:8:14.91:0,15,128	0/1:50,0:14:14.76:15,0,84	0/0:22,0:21:19.11:0,19,353	1/1:5,2:7:20.99:328,21,0	1/1:4,13:16:27.07:471,27,0	0/0:28,0:27:65:0,65,841	1/1:4,0:5:14.91:170,15,0	0/0:20,0:18:39.57:0,40,497	0/0:11,0:8:18.05:0,18,226	0/0:7,0:7:12.51:0,13,176	0/0:10,0:10:15.52:0,16,214	0/0:8,0:8:12.03:0,12,157	0/0:11,0:10:16.34:0,16,170	1/1:4,1:3:5.85:34,6,0	1/1:13,1:11:17.94:280,18,0	0/0:18,0:14:23.59:0,24,282	1/1:20,5:22:33.36:619,33,0	1/1:20,5:24:52.35:945,52,0	0/0:7,0:6:12.49:0,12,141	0/0:6,0:6:12.03:0,12,145	0/0:16,0:15:28.22:0,28,358	0/0:4,0:4:6.01:0,6,70	1/1:9,9:18:18.17:583,18,0	0/0:33,0:29:63.88:0,64,743	0/0:18,0:18:27.42:0,27,330	0/0:15,0:13:18.06:0,18,256
chr10	6857707	.	TG	T	4981.82	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=14.802;DP=583;FS=4.175;HRun=5;HaplotypeScore=86.6208;InbreedingCoeff=0.9976;MQ=78.19;MQ0=0;MQRankSum=-6.282;QD=29.83;ReadPosRankSum=0.796;VQSLOD=5.2988;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,37:39:99:1218,108,0	0/0:6,0:6:18.06:0,18,246	0/0:27,0:27:75.25:0,75,1012	0/0:28,0:28:72.61:0,73,902	0/0:27,0:27:60.18:0,60,801	1/1:1,14:15:45.11:500,45,0	1/1:2,16:18:48.14:544,48,0	0/0:22,0:22:63.17:0,63,816	1/1:0,16:16:48.14:544,48,0	0/0:20,0:20:51.17:0,51,694	0/0:15,0:15:39.13:0,39,533	0/0:25,0:25:69.22:0,69,927	0/0:24,0:24:69.22:0,69,919	0/0:18,0:18:54.18:0,54,738	0/0:24,0:24:72.24:0,72,982	1/1:0,14:14:42.12:476,42,0	1/1:2,19:21:51.62:579,52,0	0/0:22,0:21:54.18:0,54,738	1/1:12,13:25:51.13:566,51,0	1/1:3,7:10:27.02:282,27,0	0/0:35,0:35:99:0,99,1349	0/0:17,0:17:51.13:0,51,676	0/0:25,0:25:57.17:0,57,748	0/0:17,0:17:51.17:0,51,698	1/1:1,8:9:24.07:272,24,0	0/0:32,0:32:93.31:0,93,1269	0/0:25,0:24:69.18:0,69,906	0/0:7,0:7:21.07:0,21,287
chr10	6857739	.	A	AT	5161.65	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=13.345;DP=635;FS=0.000;HRun=3;HaplotypeScore=93.5669;InbreedingCoeff=0.9947;MQ=62.20;MQ0=0;MQRankSum=-8.782;QD=34.18;ReadPosRankSum=1.042;VQSLOD=4.9891;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,99,1174	0/0:5,0:5:12.04:0,12,144	0/0:26,0:24:66.20:0,66,782	0/0:25,0:24:55.63:0,56,615	0/0:32,0:32:72.21:0,72,854	1/1:2,17:19:48.16:670,48,0	1/1:1,22:23:57.19:797,57,0	0/0:24,0:24:69.20:0,69,816	1/1:2,18:20:48.16:668,48,0	0/0:18,0:18:51.16:0,51,612	0/0:15,0:15:42.11:0,42,486	0/0:26,0:26:75.18:0,75,863	0/0:24,0:24:66.16:0,66,773	0/0:18,0:18:51.15:0,51,605	0/0:29,0:29:84.26:0,84,1007	1/1:0,21:21:60.20:838,60,0	1/1:3,22:25:57.16:776,57,0	0/0:19,0:18:54.15:0,54,634	1/1:5,14:18:39.09:503,39,0	1/1:0,11:11:33.11:459,33,0	0/0:35,0:35:99:0,105,1248	0/0:17,0:17:39.11:0,39,457	0/0:28,0:28:66.19:0,66,779	0/0:22,0:22:62.94:0,63,756	1/1:2,11:13:33.11:450,33,0	0/0:33,0:33:96.21:0,96,1111	0/0:35,0:33:87.25:0,87,1029	0/0:13,0:13:33.10:0,33,395
chr10	6858325	.	C	CT	672.34	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.264;DP=660;FS=2.046;HRun=0;HaplotypeScore=82.0491;InbreedingCoeff=0.9936;MQ=77.22;MQ0=0;MQRankSum=-1.488;QD=35.39;ReadPosRankSum=-0.067;VQSLOD=3.1562;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,18:19:48.16:767,48,0	0/0:8,0:8:24.05:0,24,314	0/0:14,0:14:35.94:0,36,449	0/0:21,0:21:48.18:0,48,792	0/0:34,0:34:99:0,99,1359	0/0:24,0:24:69.22:0,69,895	0/0:24,0:24:66.20:0,66,841	0/0:35,0:35:96.31:0,96,1311	0/0:29,0:29:87.28:0,87,1129	0/0:25,0:25:72.24:0,72,992	0/0:24,0:24:69.23:0,69,963	0/0:35,0:35:99:0,102,1424	0/0:26,0:26:69.23:0,69,960	0/0:25,0:25:72.24:0,72,1006	0/0:17,0:17:51.17:0,51,713	0/0:23,0:23:66.20:0,66,840	0/0:19,0:19:54.18:0,54,700	0/0:20,0:19:54.18:0,54,750	0/0:23,0:23:66.21:0,66,856	0/0:27,0:27:78.25:0,78,1011	0/0:26,0:26:78.20:0,78,1055	0/0:27,0:27:75.25:0,75,1048	0/0:23,0:23:66.18:0,66,893	0/0:12,0:12:33.11:0,33,461	0/0:31,0:31:93.29:0,93,1193	0/0:33,0:33:96.32:0,96,1339	0/0:29,0:29:84.24:0,84,1121	0/0:7,0:7:21.07:0,21,293
chr10	6859304	.	TTAG	T	1823.74	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.197;DP=561;FS=3.960;HRun=0;HaplotypeScore=92.6318;InbreedingCoeff=0.9894;MQ=84.48;MQ0=0;MQRankSum=-4.621;QD=36.47;ReadPosRankSum=3.861;VQSLOD=4.5993;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,46:50:99:1919,117,0	0/0:7,0:7:18.06:0,18,408	0/0:23,0:23:65.96:0,66,1339	0/0:20,0:20:47.89:0,48,938	0/0:17,0:17:45.15:0,45,986	0/0:28,0:28:81.28:0,81,1798	0/0:15,0:15:45.15:0,45,993	0/0:26,0:26:75.26:0,75,1659	0/0:18,0:18:54.19:0,54,1205	0/0:11,0:11:33.11:0,33,738	0/0:17,0:17:51.18:0,51,1148	0/0:12,0:12:33.11:0,33,740	0/0:17,0:17:48.16:0,48,1058	0/0:13,0:13:36.12:0,36,771	0/0:25,0:24:75.26:0,75,1689	0/0:21,0:21:63.22:0,63,1384	0/0:24,0:24:72.25:0,72,1549	0/0:23,0:23:63.22:0,63,1427	0/0:21,0:21:54.18:0,54,1163	0/0:19,0:19:57.20:0,57,1245	0/0:18,0:18:54.19:0,54,1191	0/0:21,0:21:63.22:0,63,1391	0/0:24,0:24:69.24:0,69,1549	0/0:22,0:22:60.21:0,60,1320	0/0:17,0:17:45.15:0,45,991	0/0:20,0:20:57.20:0,57,1267	0/0:24,0:24:66.23:0,66,1475	0/0:8,0:8:24.03:0,24,452
chr10	6859534	.	C	CT	3660.88	PASS	AB=0.857;AC=18;AF=0.321;AN=56;BaseQRankSum=9.939;DP=477;FS=0.000;HRun=10;HaplotypeScore=70.2503;InbreedingCoeff=0.8010;MQ=78.04;MQ0=2;MQRankSum=-3.461;QD=18.77;ReadPosRankSum=-0.201;VQSLOD=4.1984;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:33:51.11:280,51,0	0/1:5,0:5:6.50:7,0,84	0/0:34,0:23:24.43:0,24,208	0/0:17,0:13:1.30:0,1,54	0/0:19,0:19:44.91:0,45,369	1/1:8,16:24:66.16:696,66,0	1/1:9,12:23:50.93:483,51,0	0/0:20,0:20:43.16:0,43,347	0/1:9,6:15:8.25:254,0,8	0/0:15,0:15:3.98:0,4,239	0/0:12,0:12:26:0,26,203	0/0:13,0:13:32.96:0,33,271	0/0:5,0:5:14.98:0,15,122	0/0:12,0:12:29.89:0,30,246	0/0:11,0:11:23.93:0,24,194	1/1:2,8:10:30.03:305,30,0	1/1:12,11:24:14.92:364,15,0	0/0:22,0:21:33.45:0,33,419	1/1:9,6:15:35.90:341,36,0	1/1:11,10:22:48.64:459,49,0	0/0:15,0:15:29.93:0,30,243	0/0:15,0:15:32.95:0,33,270	0/0:12,0:12:35.10:0,35,268	0/0:14,0:14:35.95:0,36,294	1/1:2,17:19:45.11:471,45,0	0/0:16,0:16:41.94:0,42,343	0/0:19,0:19:39.40:0,39,321	0/0:10,1:11:29.95:0,30,246
chr10	6859545	.	C	CT	3792.39	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=10.757;DP=459;FS=1.403;HRun=10;HaplotypeScore=65.7424;InbreedingCoeff=0.8997;MQ=67.71;MQ0=4;MQRankSum=-2.096;QD=17.56;ReadPosRankSum=0.144;VQSLOD=4.2337;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:34,0:32:60.44:465,60,0	0/0:5,0:5:11.98:0,12,101	0/1:26,0:16:4.14:4,0,84	0/0:11,0:7:7.59:0,8,46	0/0:22,0:22:56.76:0,57,516	1/1:8,16:24:57.58:630,58,0	1/1:4,15:20:47.99:520,48,0	0/0:19,0:19:41.95:0,42,384	1/1:5,9:14:5.61:214,6,0	0/0:15,0:15:29.99:0,30,267	0/0:9,0:9:21:0,21,189	0/0:11,0:11:18:0,18,165	0/0:9,0:8:14.90:0,15,126	0/0:14,0:14:35.96:0,36,329	0/0:10,0:10:30.02:0,30,274	1/1:1,10:11:27.08:311,27,0	1/1:4,24:28:36.10:412,36,0	0/0:26,0:25:58.07:0,58,544	1/1:8,11:16:36.09:400,36,0	1/1:5,15:21:40.47:446,40,0	0/0:12,0:12:30:0,30,274	0/0:14,0:14:27.01:0,27,247	0/0:12,0:12:20.98:0,21,188	0/0:14,0:14:36.01:0,36,329	1/1:7,11:18:22.96:390,23,0	0/0:16,0:16:35.99:0,36,322	0/0:13,0:13:33.01:0,33,302	0/0:11,0:11:14.94:0,15,128
chr10	6859548	.	T	TC	1065.30	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=12.413;DP=461;FS=4.302;HRun=0;HaplotypeScore=70.8048;InbreedingCoeff=0.1801;MQ=66.27;MQ0=6;MQRankSum=-3.120;QD=5.70;ReadPosRankSum=6.117;VQSLOD=2.9768;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:16,17:31:4.30:682,4,0	0/0:4,0:4:12.04:0,12,167	0/0:29,0:15:29.72:0,30,282	0/0:14,0:6:15.15:0,15,123	0/0:22,0:22:64.74:0,65,851	0/1:24,0:24:36.42:81,0,36	0/1:20,0:20:21.14:94,0,21	0/0:19,0:19:54.15:0,54,694	0/1:16,0:16:15.91:16,0,108	0/0:15,0:15:42.11:0,42,531	0/0:9,0:9:27.07:0,27,345	0/0:11,0:11:30.07:0,30,359	0/0:9,0:8:24.05:0,24,282	0/0:15,0:15:45.09:0,45,574	0/0:11,0:11:30.10:0,30,419	1/1:11,0:11:21.56:79,22,0	0/1:28,0:28:59.44:69,0,59	0/0:25,0:24:69.17:0,69,908	0/1:18,0:14:8.24:70,0,8	0/1:19,0:19:35.71:72,0,36	0/0:14,0:14:42.10:0,42,523	0/0:14,0:14:39.09:0,39,483	0/0:13,0:13:36.06:0,36,420	0/0:15,0:15:45.09:0,45,573	0/1:18,0:18:57.14:57,0,58	0/0:15,0:15:45:0,45,572	0/0:12,0:12:36.11:0,36,487	0/0:8,0:8:24.03:0,24,278
chr10	6860821	.	TCACACACACA	T	108.60	PASS	AB=1.000;AC=3;AF=0.071;AN=42;BaseQRankSum=1.414;DP=427;FS=0.000;HRun=0;HaplotypeScore=119.6735;InbreedingCoeff=0.2056;MQ=69.28;MQ0=22;MQRankSum=-1.284;QD=6.03;ReadPosRankSum=-0.239;VQSLOD=2.1664;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:24:4.53:0,5,28	0/0:6,0:6:0:0,0,0	./.	./.	0/0:8,0:10:6:0,6,71	0/0:11,0:10:2.99:0,3,24	0/0:17,0:17:9.03:0,9,178	0/0:25,0:25:1.55:0,2,4	0/0:4,0:4:6:0,6,72	0/0:12,0:11:11.88:0,12,88	./.	./.	1/1:9,2:11:6.02:161,6,0	./.	0/1:7,0:7:15.94:36,0,16	0/0:14,0:14:11.98:0,12,119	0/0:20,0:23:12.04:0,12,196	0/0:12,0:11:1.82:0,2,5	0/0:9,0:9:5.94:0,6,44	0/0:6,0:6:2.99:0,3,24	0/0:46,0:43:17.92:0,18,138	./.	./.	0/0:24,9:33:2.58:0,3,23	0/0:6,0:5:3.01:0,3,86	0/0:11,0:11:3.48:0,3,72	0/0:9,0:10:5.99:0,6,71	0/0:4,0:6:9.03:0,9,173
chr10	6861018	.	AAT	A	5048.05	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=11.974;DP=459;FS=0.000;HRun=0;HaplotypeScore=62.1558;InbreedingCoeff=0.9266;MQ=64.96;MQ0=0;MQRankSum=-0.499;QD=30.05;ReadPosRankSum=3.337;VQSLOD=6.3911;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,28:31:81.26:1030,81,0	0/0:4,0:4:12.02:0,12,174	0/0:9,0:9:12.02:0,12,153	0/0:6,0:5:3.01:0,3,50	0/0:22,0:22:51.17:0,51,843	1/1:2,12:14:30.10:383,30,0	1/1:2,18:20:45.14:575,45,0	0/0:37,0:37:99:0,102,1599	1/1:1,16:17:48.15:613,48,0	0/0:21,0:21:48.12:0,48,700	0/0:16,0:16:39.13:0,39,651	0/0:12,0:12:27.02:0,27,415	0/0:22,0:22:57.11:0,57,885	0/0:14,0:14:27.02:0,27,418	0/0:13,0:13:39.13:0,39,650	1/1:0,13:13:32.97:421,33,0	1/1:3,22:25:51.16:651,51,0	0/0:13,2:15:0.88:0,1,555	1/1:1,15:16:28.10:492,28,0	1/1:3,13:16:39.06:463,39,0	0/0:15,0:15:42.14:0,42,702	0/0:7,0:7:21.07:0,21,350	0/0:15,0:15:30.10:0,30,500	0/0:13,0:13:30.08:0,30,464	1/1:3,13:16:33.11:421,33,0	0/0:24,0:24:66.21:0,66,1053	0/0:14,0:14:33.10:0,33,551	0/0:12,0:12:36.09:0,36,548
chr10	6861166	.	GGTGTGTGTGT	G	4041.95	PASS	AB=0.743;AC=31;AF=0.596;AN=52;BaseQRankSum=1.748;DP=537;FS=6.170;HRun=0;HaplotypeScore=170.0861;InbreedingCoeff=0.5388;MQ=64.33;MQ0=8;MQRankSum=-6.275;QD=13.08;ReadPosRankSum=-0.387;VQSLOD=2.1110;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:44:63.22:0,63,2467	1/1:4,1:7:6.02:159,6,0	./.	0/0:26,0:17:6.02:0,6,131	1/1:11,4:17:2.61:89,3,0	0/1:8,0:12:18.86:19,0,76	0/0:17,0:21:14.29:0,14,173	1/1:24,5:27:11.47:126,11,0	0/1:17,0:25:1.12:1,0,150	1/1:17,9:26:27.04:526,27,0	1/1:11,6:19:15:285,15,0	1/1:8,9:18:18.06:517,18,0	1/1:11,8:19:24.08:696,24,0	1/1:12,5:17:11.70:273,12,0	1/1:8,6:13:12.04:358,12,0	0/1:8,0:12:9.52:10,0,159	0/1:18,0:25:45.21:45,0,119	1/1:11,2:13:6.01:179,6,0	0/0:14,0:19:21.97:0,22,262	0/0:12,0:13:17.58:0,18,189	./.	1/1:5,1:6:3.01:90,3,0	1/1:4,1:8:12.04:299,12,0	1/1:19,5:26:14.61:346,15,0	0/1:7,0:12:4.75:24,0,5	0/0:19,0:19:30.09:0,30,663	0/0:9,0:16:26.66:0,27,536	0/0:7,0:15:24.08:0,24,506
chr10	6861266	.	A	AGACTTT	2109.12	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=0.788;DP=488;FS=12.624;HRun=0;HaplotypeScore=116.8487;InbreedingCoeff=0.9028;MQ=94.97;MQ0=1;MQRankSum=-7.899;QD=60.26;ReadPosRankSum=-1.056;VQSLOD=2.7676;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,24:35:57.36:2204,57,0	0/0:3,0:3:9.03:0,9,186	0/0:18,0:18:39.13:0,39,867	0/0:31,0:31:80.76:0,81,1611	0/0:16,0:16:45.15:0,45,983	0/0:14,0:14:36.12:0,36,815	0/0:26,0:25:63.22:0,63,1400	0/0:25,0:25:57.19:0,57,1211	0/0:26,0:26:69.24:0,69,1558	0/0:19,0:19:51.18:0,51,1140	0/0:9,0:9:21.07:0,21,472	0/0:13,0:13:33.11:0,33,745	0/0:15,0:15:45.15:0,45,1018	0/0:14,0:14:39.13:0,39,881	0/0:18,0:18:51.18:0,51,1135	0/0:17,0:17:45.15:0,45,999	0/0:31,0:31:87.30:0,87,1967	0/0:18,0:17:51.18:0,51,1127	0/0:18,0:18:45.15:0,45,974	0/0:6,0:6:18.06:0,18,407	0/0:23,0:23:51.18:0,51,1130	0/0:15,0:15:42.14:0,42,908	0/0:9,0:9:21.06:0,21,429	0/0:27,0:27:72.25:0,72,1629	0/0:8,0:8:24.08:0,24,543	0/0:14,0:14:42.14:0,42,896	0/0:15,0:15:45.15:0,45,994	0/0:5,0:5:12.04:0,12,272
chr10	6861773	.	A	ATGGAC	1922.04	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.906;DP=737;FS=1.709;HRun=0;HaplotypeScore=154.0849;InbreedingCoeff=0.9969;MQ=63.82;MQ0=0;MQRankSum=-7.889;QD=68.64;ReadPosRankSum=-1.464;VQSLOD=3.9919;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,22:28:69.24:2017,69,0	0/0:10,0:10:24.08:0,24,497	0/0:31,0:29:75.25:0,75,1487	0/0:17,0:17:48.14:0,48,945	0/0:18,0:18:48.11:0,48,883	0/0:22,0:22:63.22:0,63,1286	0/0:37,0:37:96.31:0,96,1899	0/0:30,0:30:84.28:0,84,1680	0/0:27,0:27:75.26:0,75,1539	0/0:30,0:30:87.30:0,87,1802	0/0:30,0:30:75.26:0,75,1529	0/0:33,0:33:96.33:0,96,1975	0/0:26,0:26:75.26:0,75,1524	0/0:25,0:25:69.22:0,69,1393	0/0:29,0:29:87.26:0,87,1693	0/0:30,0:30:81.28:0,81,1660	0/0:51,0:50:99:0,147,2812	0/0:43,0:43:99:0,120,2422	0/0:23,0:23:57.20:0,57,1181	0/0:21,0:21:63.15:0,63,1190	0/0:41,0:41:99:0,114,2282	0/0:17,0:17:48.16:0,48,994	0/0:20,0:20:54.14:0,54,1076	0/0:22,0:22:63.19:0,63,1231	0/0:17,0:17:48.15:0,48,957	0/0:17,0:17:42.14:0,42,835	0/0:32,0:31:93.30:0,93,1889	0/0:10,0:10:27.08:0,27,523
chr10	6862284	.	C	CT	2442.67	PASS	AB=0.775;AC=30;AF=0.536;AN=56;BaseQRankSum=0.429;DP=420;FS=2.294;HRun=12;HaplotypeScore=75.6056;InbreedingCoeff=0.5024;MQ=58.60;MQ0=11;MQRankSum=-3.404;QD=9.73;ReadPosRankSum=-1.665;VQSLOD=2.7878;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:28:41.27:213,41,0	0/1:3,2:6:9.99:62,0,10	0/0:8,0:8:0.65:0,1,36	0/0:5,0:4:7.51:0,8,47	1/1:4,8:12:15.91:148,16,0	0/0:17,0:18:37.65:0,38,262	0/0:35,0:34:52.52:0,53,374	1/1:10,7:18:17.12:194,17,0	0/0:11,0:11:20.85:0,21,153	1/1:9,13:21:40.58:370,41,0	0/1:6,9:14:4.85:106,0,5	1/1:5,3:8:14.95:128,15,0	1/1:5,4:8:5.96:49,6,0	1/1:2,5:7:5.97:50,6,0	1/1:1,8:9:15.02:146,15,0	0/0:15,0:15:25.04:0,25,166	0/0:21,1:23:32.67:0,33,241	1/1:9,20:29:34.98:480,35,0	0/0:22,0:22:2.79:0,3,208	0/1:9,1:10:5.98:6,0,66	0/1:5,7:13:4.17:121,0,4	1/1:6,2:7:11.84:93,12,0	1/1:5,7:12:12.10:143,12,0	1/1:1,15:17:33.36:307,33,0	0/0:8,0:8:16.69:0,17,112	0/1:11,1:12:14.30:14,0,73	0/1:10,1:11:5.35:5,0,128	0/0:18,1:17:2.68:0,3,132
chr10	6862855	.	T	TGAGTTTCACAATGTAGA	3190.53	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-2.319;DP=810;FS=0.000;HRun=0;HaplotypeScore=381.7975;InbreedingCoeff=0.9992;MQ=89.92;MQ0=0;MQRankSum=-8.820;QD=83.96;ReadPosRankSum=-4.093;VQSLOD=1.8604;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:16,13:38:79.07:3285,79,0	0/0:12,0:12:36.12:0,36,1549	0/0:36,0:36:93.31:0,93,3476	0/0:28,0:28:75.20:0,75,2959	0/0:31,0:31:87.24:0,87,3530	0/0:20,0:20:57.20:0,57,2429	0/0:40,0:40:99:0,117,4835	0/0:25,0:25:66.20:0,66,2646	0/0:29,0:29:87.28:0,87,3901	0/0:36,0:36:93.31:0,93,4065	0/0:16,0:16:36.11:0,36,1638	0/0:36,0:36:99:0,99,4544	0/0:39,0:39:99:0,114,5154	0/0:35,0:35:99:0,99,4249	0/0:35,0:35:99:0,105,4811	0/0:22,0:22:60.21:0,60,2738	0/0:30,0:30:81.28:0,81,3531	0/0:19,0:19:57.20:0,57,2786	0/0:21,0:21:60.17:0,60,2264	0/0:22,0:22:66.21:0,66,2980	0/0:54,0:54:99:0,153,6823	0/0:27,0:27:81.28:0,81,3726	0/0:20,0:20:57.20:0,57,2523	0/0:38,0:38:99:0,108,4782	0/0:20,0:20:57.16:0,57,2508	0/0:36,0:36:99:0,99,4424	0/0:34,0:34:99:0,102,4743	0/0:11,0:11:30.10:0,30,1462
chr10	6865661	.	G	GA	867.83	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=1.649;DP=579;FS=5.264;HRun=8;HaplotypeScore=92.5357;InbreedingCoeff=0.4551;MQ=71.72;MQ0=3;MQRankSum=-0.498;QD=17.02;ReadPosRankSum=0.865;VQSLOD=3.5827;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:10,24:35:76.27:959,76,0	0/0:11,0:11:27.01:0,27,247	0/0:24,0:18:2.46:0,2,182	0/1:16,0:13:11.89:12,0,97	0/0:28,0:28:75.03:0,75,686	0/0:19,0:19:54.03:0,54,494	0/0:15,1:16:1.39:0,1,267	0/0:21,0:21:48.01:0,48,439	0/0:23,0:23:57.02:0,57,522	0/0:19,0:19:51.03:0,51,467	0/0:20,0:20:54.02:0,54,493	0/0:13,1:14:4.40:0,4,295	0/0:12,0:12:12.95:0,13,181	0/0:18,0:18:39:0,39,357	0/0:21,0:21:48.01:0,48,439	0/0:15,0:15:42.02:0,42,384	0/0:36,0:36:90.04:0,90,824	0/0:14,0:15:41.06:0,41,363	0/0:22,1:23:22.39:0,22,455	0/0:14,0:14:42.02:0,42,384	0/0:23,0:23:54:0,54,489	0/0:22,0:22:48:0,48,435	0/0:23,0:23:57.03:0,57,522	0/0:17,0:17:47.93:0,48,423	0/0:27,0:27:63.03:0,63,577	0/0:27,0:27:75.03:0,75,683	0/0:25,0:25:63.02:0,63,577	0/0:15,0:15:45.01:0,45,407
chr10	6865845	.	T	TTTG	1353.72	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-6.564;DP=583;FS=2.653;HRun=0;HaplotypeScore=80.0342;InbreedingCoeff=0.9891;MQ=69.50;MQ0=1;MQRankSum=-1.073;QD=39.82;ReadPosRankSum=1.927;VQSLOD=4.7698;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,27:34:69.24:1449,69,0	0/0:11,0:11:33.11:0,33,495	0/0:23,0:22:54.17:0,54,770	0/0:25,0:25:40.64:0,41,667	0/0:16,0:16:36.11:0,36,520	0/0:21,0:21:60.20:0,60,903	0/0:30,0:30:75.22:0,75,1066	0/0:27,0:27:63.10:0,63,827	0/0:15,0:15:36.12:0,36,540	0/0:23,0:23:60.18:0,60,851	0/0:14,0:14:27.08:0,27,385	0/0:18,0:18:48.15:0,48,704	0/0:14,0:14:39.12:0,39,550	0/0:25,0:25:69.23:0,69,1019	0/0:14,0:14:39.12:0,39,567	0/0:11,0:11:27.09:0,27,404	0/0:37,0:37:48.25:0,48,1334	0/0:21,0:21:57.19:0,57,858	0/0:25,0:25:60.13:0,60,783	0/0:19,0:19:51.17:0,51,766	0/0:24,0:24:63.16:0,63,880	0/0:14,0:14:39.12:0,39,566	0/0:12,0:12:33.11:0,33,496	0/0:23,0:23:60.17:0,60,860	0/0:27,0:27:69.23:0,69,1039	0/0:30,0:30:87.28:0,87,1270	0/0:23,0:23:66.19:0,66,946	0/0:6,0:6:18.06:0,18,269
chr10	6866746	.	TCA	T	1897.97	PASS	AB=0.584;AC=4;AF=0.071;AN=56;BaseQRankSum=9.682;DP=1087;FS=0.000;HRun=0;HaplotypeScore=155.4070;InbreedingCoeff=0.4549;MQ=53.24;MQ0=32;MQRankSum=2.347;QD=18.61;ReadPosRankSum=0.963;VQSLOD=3.8525;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:0.03:0,0,25	0/0:18,1:18:46:0,46,683	0/0:51,0:6:11.99:0,12,189	0/0:55,0:15:26.46:0,26,369	0/0:38,0:38:96.30:0,96,1561	0/0:22,0:22:63.18:0,63,1013	0/0:37,0:37:96.74:0,97,1509	0/0:58,0:55:99:0,135,1957	0/0:40,0:39:78.56:0,79,1307	0/0:46,0:41:99:0,108,1796	0/0:22,0:22:57.17:0,57,933	0/0:34,0:34:69.10:0,69,1023	0/0:24,0:24:69.22:0,69,1112	0/0:32,1:33:42.20:0,42,1164	0/0:38,0:38:95.79:0,96,1522	0/0:26,0:25:66.19:0,66,1051	0/0:33,0:32:83.87:0,84,1353	0/0:31,0:31:69.24:0,69,1140	0/0:23,0:17:39.09:0,39,550	0/0:35,0:35:96.27:0,96,1519	0/0:147,0:146:99:0,367,5913	0/0:37,0:37:99:0,99,1639	0/0:21,0:21:48.14:0,48,753	0/0:47,0:47:99:0,114,1870	0/0:31,0:30:75.24:0,75,1219	0/1:21,35:51:11.79:1125,0,12	1/1:5,25:30:51.16:662,51,0	0/1:3,13:16:8.37:226,0,8
chr10	6866756	.	ACG	A	821.28	PASS	AB=0.990;AC=6;AF=0.107;AN=56;BaseQRankSum=12.646;DP=1125;FS=0.000;HRun=0;HaplotypeScore=162.2753;InbreedingCoeff=0.6021;MQ=52.75;MQ0=36;MQRankSum=3.121;QD=6.90;ReadPosRankSum=0.628;VQSLOD=3.1312;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:27:18.92:150,19,0	0/0:21,0:20:32.04:0,32,706	0/0:51,1:6:11.09:0,11,204	0/0:64,0:21:43.01:0,43,519	0/0:38,0:38:99:0,108,1810	0/0:27,0:27:72.18:0,72,1223	0/0:39,0:38:97.97:0,98,1685	0/0:62,0:58:99:0,156,2399	0/0:38,1:39:86.94:0,87,1421	0/0:50,0:46:99:0,135,2216	0/0:25,0:25:54.23:0,54,1023	0/0:37,0:37:80.52:0,81,1207	0/0:23,0:23:67.88:0,68,1086	0/0:34,0:34:66.92:0,67,1345	0/0:37,0:37:91.99:0,92,1665	0/0:25,0:25:65.78:0,66,1114	0/0:33,0:31:77.58:0,78,1461	0/0:26,1:27:72.79:0,73,1364	0/0:23,0:17:44.77:0,45,628	0/0:33,0:33:90.29:0,90,1678	0/0:166,1:164:99:0,367,6911	0/0:41,0:41:99:0,116,1914	0/0:27,0:27:72.04:0,72,1076	0/0:45,1:46:99:0,126,2127	0/0:32,0:31:84.18:0,84,1450	0/1:48,1:44:99:457,0,108	0/1:28,0:28:7.42:255,0,7	1/1:15,0:15:5.94:87,6,0
chr10	6866792	.	ATACACACACACC	A	77.02	PASS	AB=0.640;AC=1;AF=0.018;AN=56;BaseQRankSum=4.400;DP=1161;FS=1.390;HRun=0;HaplotypeScore=380.0879;InbreedingCoeff=-0.0231;MQ=56.52;MQ0=23;MQRankSum=-3.507;QD=4.81;ReadPosRankSum=-3.053;VQSLOD=0.9574;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:7,9:16:33.75:151,0,34	0/0:21,0:20:48.15:0,48,2117	0/0:51,0:16:39.23:0,39,855	0/0:69,0:27:3.71:0,4,709	0/0:39,0:39:99:0,99,4490	0/0:27,0:26:57.13:0,57,2433	0/0:43,0:42:90.27:0,90,4009	0/0:57,0:54:99:0,127,3563	0/0:39,0:38:73.59:0,74,3342	0/0:50,0:48:99:0,132,5887	0/0:33,0:33:84.27:0,84,3827	0/0:40,0:40:90.27:0,90,4659	0/0:16,0:16:45.14:0,45,1988	0/0:37,0:37:90.31:0,90,4091	0/0:38,0:38:96.33:0,96,4482	0/0:24,0:24:50.97:0,51,2088	0/0:38,0:37:35.63:0,36,3542	0/0:30,0:30:75.27:0,75,2963	0/0:26,0:23:60.11:0,60,2097	0/0:40,0:39:99:0,102,3604	0/0:174,0:173:99:0,397,16779	0/0:44,0:44:99:0,117,5641	0/0:32,0:32:90.31:0,90,4218	0/0:56,0:56:99:0,150,6843	0/0:28,0:27:60.21:0,60,2863	0/0:45,0:41:99:0,114,4891	0/0:27,0:27:60.07:0,60,2001	0/0:20,0:20:45.14:0,45,1947
chr10	6866845	.	T	TAC	7997.27	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-14.192;DP=1097;FS=8.144;HRun=0;HaplotypeScore=205.5802;InbreedingCoeff=0.9626;MQ=55.01;MQ0=15;MQRankSum=0.976;QD=29.29;ReadPosRankSum=2.794;VQSLOD=5.5329;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:13:2.83:0,3,14	0/0:12,0:12:30.10:0,30,391	0/0:45,0:16:20.06:0,20,207	0/0:39,0:8:12.03:0,12,143	0/0:41,0:40:72.18:0,72,890	1/1:5,26:31:66.16:1097,66,0	1/1:11,35:46:87.23:1399,87,0	0/0:54,0:54:86.92:0,87,1277	1/1:7,29:37:25.41:955,25,0	0/0:57,0:54:99:0,114,1426	0/0:32,0:32:66.18:0,66,796	0/0:41,0:41:90.07:0,90,1131	0/0:23,0:23:51.16:0,51,643	0/0:39,0:39:68.98:0,69,901	0/0:39,0:39:93.25:0,93,1160	1/1:7,21:29:21.32:636,21,0	1/1:4,36:42:77.64:1341,78,0	0/0:26,0:26:17.66:0,18,649	1/1:9,9:18:24.02:343,24,0	1/1:8,32:39:78.27:1280,78,0	0/0:150,0:148:99:0,237,2936	0/0:54,0:54:99:0,114,1422	0/0:39,0:39:69.22:0,69,870	0/0:39,0:39:74.63:0,75,945	1/1:7,21:28:56.85:947,57,0	0/0:44,0:44:99:0,111,1389	0/0:19,0:19:45.14:0,45,567	0/0:16,0:16:42.13:0,42,530
chr10	6866886	.	ACACT	A	17855.84	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=2.915;DP=954;FS=8.498;HRun=0;HaplotypeScore=202.5067;InbreedingCoeff=0.9436;MQ=51.55;MQ0=14;MQRankSum=-1.560;QD=32.23;ReadPosRankSum=3.635;VQSLOD=4.0905;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:10,0:10:0.01:0,0,0	1/1:8,4:12:26.78:427,27,0	0/0:40,0:12:22.13:0,22,508	0/0:44,0:10:19.97:0,20,399	1/1:6,28:34:66.17:1152,66,0	0/0:27,0:26:60.10:0,60,1358	0/0:38,0:38:96.07:0,96,2368	1/1:4,33:36:87.16:1385,87,0	0/0:35,0:35:90.30:0,90,2291	1/1:8,47:50:99:2407,138,0	1/1:2,18:21:36.12:683,36,0	1/1:4,38:42:93.74:1712,94,0	1/1:4,20:24:54.17:958,54,0	1/1:11,29:40:59.51:1126,60,0	1/1:5,28:33:69.24:1289,69,0	0/0:30,0:30:70.17:0,70,1767	0/0:27,0:27:54.17:0,54,1317	1/1:14,16:29:13.78:938,14,0	0/0:17,0:10:27.08:0,27,589	0/0:39,0:38:96.02:0,96,2338	1/1:14,96:108:99:2710,152,0	1/1:4,46:51:90.27:1621,90,0	1/1:3,22:25:45.15:846,45,0	1/1:16,13:28:33.07:603,33,0	0/0:24,0:24:59.83:0,60,1405	0/0:48,1:48:45.69:0,46,3054	0/0:23,0:22:63.16:0,63,1498	0/0:7,0:7:2.08:0,2,466
chr10	6866945	.	TCA	T	10385.56	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-1.296;DP=799;FS=2.279;HRun=0;HaplotypeScore=160.5153;InbreedingCoeff=0.9712;MQ=54.14;MQ0=6;MQRankSum=3.999;QD=22.83;ReadPosRankSum=3.755;VQSLOD=5.6907;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:10:2.55:12,3,0	1/1:2,9:11:27.07:330,27,0	0/0:36,0:18:23.73:0,24,255	0/0:28,0:15:29.39:0,29,333	1/1:7,14:21:48.14:597,48,0	0/0:27,0:25:57.14:0,57,870	0/0:31,0:31:47.98:0,48,707	1/1:12,37:48:99:1261,105,0	0/0:31,0:31:66.12:0,66,1021	1/1:14,26:40:75.06:1153,75,0	1/1:6,8:14:24.08:305,24,0	1/1:12,16:28:35.18:459,35,0	1/1:6,13:19:45.14:567,45,0	1/1:6,25:31:54.17:686,54,0	1/1:4,18:22:48.15:611,48,0	0/0:22,0:22:45.07:0,45,676	0/0:20,0:20:43.21:0,43,642	1/1:6,21:27:12.97:568,13,0	0/0:26,0:23:54.12:0,54,763	0/0:32,0:31:69.24:0,69,1116	1/1:34,58:91:99:2008,159,0	1/1:11,21:32:54.04:660,54,0	1/1:9,13:23:48.14:597,48,0	1/1:5,31:36:44.93:572,45,0	0/0:15,0:15:41.46:0,41,585	0/0:41,0:41:93.30:0,93,1502	0/0:21,0:20:54.18:0,54,879	0/0:14,0:14:39.12:0,39,626
chr10	6866959	.	T	TCA	5294.37	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-8.871;DP=786;FS=5.455;HRun=0;HaplotypeScore=163.1672;InbreedingCoeff=0.9611;MQ=52.66;MQ0=18;MQRankSum=2.265;QD=26.34;ReadPosRankSum=-0.954;VQSLOD=5.2045;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:14:2.64:0,3,14	0/0:10,0:10:24.07:0,24,292	0/0:35,0:10:15.05:0,15,186	0/0:47,0:17:11.20:0,11,76	0/0:19,0:19:51.13:0,51,600	1/1:8,17:24:60.16:951,60,0	1/1:7,25:32:27.61:497,28,0	0/0:50,0:48:99:0,114,1305	1/1:19,9:29:53.48:778,53,0	0/0:36,0:36:99:0,102,1240	0/0:10,0:10:30.09:0,30,367	0/0:26,0:26:44.47:0,44,536	0/0:16,0:16:42.08:0,42,496	0/0:29,0:29:60.18:0,60,718	0/0:21,0:21:57.17:0,57,697	1/1:11,6:16:27.08:419,27,0	1/1:5,13:17:39.13:634,39,0	0/0:30,0:30:66.03:0,66,752	1/1:14,14:23:42.01:592,42,0	1/1:8,23:33:48.16:799,48,0	0/0:94,0:92:99:0,180,2124	0/0:25,0:25:51.16:0,51,629	0/0:19,0:19:48.14:0,48,575	0/0:37,0:37:50.94:0,51,610	1/1:12,5:17:42.13:624,42,0	0/0:33,0:33:84.24:0,84,1038	0/0:19,0:18:51.16:0,51,641	0/0:14,0:14:42.13:0,42,531
chr10	6866961	.	ACACACACACT	A	50.07	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.645;DP=783;FS=1.698;HRun=0;HaplotypeScore=278.3232;InbreedingCoeff=0.8402;MQ=51.85;MQ0=20;MQRankSum=-1.491;QD=3.13;ReadPosRankSum=-3.752;VQSLOD=1.8974;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,6:15:5.06:129,5,0	0/0:10,0:10:24.08:0,24,940	0/0:33,0:8:18.06:0,18,492	0/0:46,0:14:17.47:0,17,363	0/0:19,0:19:51.18:0,51,2100	0/0:26,0:25:46.12:0,46,1503	0/0:31,0:31:39.13:0,39,1348	0/0:48,0:46:99:0,120,3478	0/0:28,0:28:46.16:0,46,1383	0/0:36,0:36:99:0,102,4226	0/0:10,0:10:30.10:0,30,1186	0/0:26,0:26:46.84:0,47,1806	0/0:17,0:17:45.15:0,45,1811	0/0:32,0:32:69.22:0,69,2276	0/0:21,0:21:57.20:0,57,2411	0/0:16,0:15:27.07:0,27,780	0/0:18,0:17:44.32:0,44,1398	0/0:29,0:29:69.24:0,69,2505	0/0:27,0:22:32.20:0,32,655	0/0:34,0:33:54:0,54,1820	0/0:93,0:90:99:0,190,7285	0/0:25,0:25:51.17:0,51,2224	0/0:19,0:19:48.16:0,48,1998	0/0:37,0:37:50.80:0,51,2220	0/0:18,0:17:31.63:0,32,985	0/0:33,0:33:90.29:0,90,3632	0/0:21,0:20:57.17:0,57,2358	0/0:14,0:14:42.14:0,42,2094
chr10	6867026	.	A	ACC	4076.59	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=13.926;DP=828;FS=6.664;HRun=1;HaplotypeScore=152.2499;InbreedingCoeff=0.9597;MQ=53.68;MQ0=21;MQRankSum=0.772;QD=19.41;ReadPosRankSum=-1.349;VQSLOD=0.6681;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:21:1.82:5,2,0	0/0:17,0:17:47.31:0,47,646	0/0:43,0:9:20.68:0,21,174	0/0:66,0:13:12.84:0,13,137	0/0:29,0:29:84.18:0,84,1188	1/1:19,7:26:33.85:574,34,0	1/1:25,3:26:32.46:346,32,0	0/0:35,0:34:99:0,99,1247	1/1:19,11:29:53.96:811,54,0	0/0:36,0:36:99:0,105,1400	0/0:21,0:21:57.08:0,57,761	0/0:35,0:35:99:0,102,1459	0/0:14,0:14:39.10:0,39,548	0/0:41,0:41:99:0,108,1521	0/0:23,0:23:66.16:0,66,959	1/1:12,11:23:35.55:714,36,0	1/1:17,7:22:36.66:600,37,0	0/0:29,0:28:60.13:0,60,836	1/1:15,2:14:17.16:251,17,0	1/1:20,6:26:11.25:398,11,0	0/0:78,0:76:99:0,193,2696	0/0:37,0:36:99:0,105,1472	0/0:20,0:20:50.23:0,50,726	0/0:22,0:22:41.67:0,42,593	1/1:12,3:15:30.46:379,30,0	0/0:45,0:45:99:0,132,1688	0/0:14,0:14:39.06:0,39,546	0/0:13,0:13:36.08:0,36,517
chr10	6867031	.	CCCACACACACACACAT	C	328.85	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=8.703;DP=844;FS=0.000;HRun=0;HaplotypeScore=352.8806;InbreedingCoeff=-0.0096;MQ=54.09;MQ0=20;MQRankSum=-0.963;QD=1.71;ReadPosRankSum=-6.801;VQSLOD=-0.2041;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:2,21:23:2.70:115,3,0	0/0:18,0:18:54.18:0,54,2607	0/0:45,0:9:19.32:0,19,343	0/0:58,0:13:9.11:0,9,271	0/0:30,0:30:87.29:0,87,4154	0/1:26,0:26:96.65:97,0,1119	0/1:28,0:26:50.56:51,0,558	0/0:34,0:33:99:0,99,2342	0/0:28,0:27:36.36:0,36,1398	0/0:38,0:38:99:0,114,3757	0/0:23,0:23:63.21:0,63,2922	0/0:37,0:37:99:0,111,5375	0/0:12,0:12:36.08:0,36,1553	0/0:41,0:41:99:0,117,5891	0/0:22,0:22:62.94:0,63,3695	0/1:26,0:26:54.18:54,0,932	0/1:26,0:24:24.63:25,0,1108	0/0:27,0:26:61.63:0,62,2950	0/1:19,0:16:43.79:44,0,476	0/1:28,0:28:57.70:58,0,332	0/0:75,0:73:99:0,185,8925	0/0:44,0:43:99:0,125,5862	0/0:21,0:21:40.01:0,40,2342	0/0:23,0:23:51.60:0,52,1934	0/1:15,0:16:24.48:24,0,350	0/0:47,0:46:99:0,138,5568	0/0:16,0:15:42.11:0,42,1751	0/0:12,0:12:36.08:0,36,1471
chr10	6867616	.	TC	T	1080.65	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.317;DP=596;FS=2.079;HRun=5;HaplotypeScore=69.2569;InbreedingCoeff=0.9776;MQ=87.15;MQ0=0;MQRankSum=-2.075;QD=26.36;ReadPosRankSum=1.627;VQSLOD=3.5322;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,40:41:99:1176,105,0	0/0:5,0:5:15.04:0,15,190	0/0:34,0:33:54.69:0,55,801	0/0:38,0:29:26.17:0,26,509	0/0:23,0:23:63.19:0,63,841	0/0:22,0:22:66.20:0,66,883	0/0:21,0:21:57.19:0,57,779	0/0:20,0:20:48.15:0,48,640	0/0:23,0:23:66.19:0,66,861	0/0:23,0:23:69.22:0,69,916	0/0:8,0:8:21.07:0,21,285	0/0:19,0:19:57.19:0,57,778	0/0:17,0:17:48.16:0,48,656	0/0:15,0:15:45.15:0,45,615	0/0:19,0:19:54.11:0,54,714	0/0:16,0:16:48.16:0,48,650	0/0:37,0:37:99:0,108,1401	0/0:22,0:22:66.21:0,66,883	0/0:16,0:16:45.10:0,45,574	0/0:12,0:12:30.08:0,30,383	0/0:38,0:38:96.31:0,96,1294	0/0:11,0:11:33.11:0,33,444	0/0:10,0:10:27.09:0,27,368	0/0:19,0:19:51.12:0,51,660	0/0:19,0:19:54.17:0,54,723	0/0:22,0:22:57.18:0,57,762	0/0:31,0:31:87.22:0,87,1103	0/0:15,0:15:45.15:0,45,615
chr10	6867772	.	G	GA	769.70	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.914;DP=505;FS=13.738;HRun=3;HaplotypeScore=68.1885;InbreedingCoeff=0.9935;MQ=81.73;MQ0=2;MQRankSum=-6.336;QD=32.07;ReadPosRankSum=-2.567;VQSLOD=1.6081;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,21:24:66.17:865,66,0	0/0:13,0:13:36.11:0,36,432	0/0:17,0:15:30.14:0,30,348	0/0:32,0:32:67.58:0,68,801	0/0:29,0:29:81.25:0,81,972	0/0:14,0:14:39.11:0,39,456	0/0:19,0:19:45.58:0,46,517	0/0:13,0:13:30.09:0,30,359	0/0:20,0:20:48.13:0,48,564	0/0:25,0:25:75.23:0,75,900	0/0:11,0:11:24.07:0,24,288	0/0:16,0:16:45.14:0,45,540	0/0:15,0:15:39.10:0,39,455	0/0:13,0:13:30.09:0,30,360	0/0:15,0:15:45.14:0,45,540	0/0:16,0:16:42.12:0,42,495	0/0:35,0:34:90.28:0,90,1080	0/0:15,0:15:42.13:0,42,504	0/0:21,0:21:57.15:0,57,661	0/0:17,0:17:51.15:0,51,605	0/0:18,0:17:45.14:0,45,540	0/0:10,0:10:30.09:0,30,360	0/0:13,0:13:39.12:0,39,467	0/0:20,0:20:48.13:0,48,564	0/0:15,0:15:27.08:0,27,324	0/0:20,0:20:57.17:0,57,684	0/0:20,0:20:54.16:0,54,648	0/0:9,0:9:27.08:0,27,324
chr10	6867795	.	GAGCTCT	G	1149.09	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.025;DP=463;FS=21.673;HRun=0;HaplotypeScore=114.1601;InbreedingCoeff=0.9805;MQ=69.21;MQ0=8;MQRankSum=-7.174;QD=49.96;ReadPosRankSum=-2.554;VQSLOD=1.7338;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,20:23:54.14:1244,54,0	0/0:12,0:12:33.11:0,33,1190	0/0:19,0:15:42.14:0,42,1353	0/0:25,0:22:56.78:0,57,1656	0/0:29,0:29:79.10:0,79,2909	0/0:12,0:12:27.09:0,27,913	0/0:16,0:16:42.14:0,42,1512	0/0:25,0:25:69.24:0,69,2489	0/0:16,0:16:39.13:0,39,1390	0/0:23,0:22:60.21:0,60,2108	0/0:9,0:9:18.04:0,18,564	0/0:15,0:15:42.14:0,42,1491	0/0:12,0:12:30.10:0,30,1080	0/0:12,0:12:24.08:0,24,850	0/0:10,0:10:26.62:0,27,968	0/0:13,0:13:36.12:0,36,1297	0/0:33,0:32:84.29:0,84,3013	0/0:14,0:14:39.13:0,39,1406	0/0:18,0:16:42.14:0,42,1389	0/0:17,0:17:48.16:0,48,1680	0/0:13,0:12:33.11:0,33,1190	0/0:11,0:11:30.10:0,30,987	0/0:12,0:12:33.11:0,33,1188	0/0:12,0:12:27.09:0,27,973	0/0:15,0:15:30.10:0,30,1009	0/0:22,0:22:66.23:0,66,2381	0/0:18,0:17:54.19:0,54,1856	0/0:7,0:7:21.07:0,21,757
chr10	6867842	.	AAAG	A	2363.47	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=4.441;DP=649;FS=4.990;HRun=0;HaplotypeScore=101.0896;InbreedingCoeff=0.5930;MQ=48.36;MQ0=36;MQRankSum=-3.391;QD=6.73;ReadPosRankSum=1.380;VQSLOD=1.9864;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:31,0:31:53.80:332,54,0	0/0:8,0:8:14.90:0,15,129	0/1:79,0:8:5.87:6,0,30	0/0:94,0:13:7.94:0,8,128	0/1:34,0:33:35.62:36,0,340	1/1:13,1:13:37.92:293,38,0	1/1:15,2:17:47.09:343,47,0	0/1:30,0:25:13.85:14,0,193	1/1:18,0:17:24.25:179,24,0	0/0:21,0:21:12.27:0,12,295	0/1:12,0:12:10.28:10,0,164	0/0:8,0:8:17.85:0,18,164	0/0:16,0:15:13.48:0,13,167	0/0:12,0:12:11.95:0,12,114	0/0:15,0:15:14.10:0,14,145	1/1:14,1:15:23.94:214,24,0	1/1:33,0:33:41.94:376,42,0	0/0:24,0:23:5.03:0,5,334	1/1:29,0:23:55.84:394,56,0	1/1:17,0:17:38.37:248,38,0	0/0:7,0:7:11.16:0,11,113	0/1:3,0:3:5.18:5,0,37	0/0:18,0:17:4.12:0,4,134	0/0:10,0:10:9.89:0,10,107	1/1:19,0:19:17.63:119,18,0	0/0:27,0:27:46.24:0,46,451	0/0:31,0:27:62.39:0,62,500	0/0:7,0:6:15.78:0,16,120
chr10	6867843	.	AAG	A	3133.93	PASS	AB=1.000;AC=27;AF=0.482;AN=56;BaseQRankSum=2.873;DP=643;FS=3.599;HRun=0;HaplotypeScore=90.7579;InbreedingCoeff=0.3460;MQ=49.32;MQ0=36;MQRankSum=-1.461;QD=7.52;ReadPosRankSum=1.495;VQSLOD=3.0831;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:31,0:31:61.61:381,62,0	0/0:7,0:7:14.48:0,14,87	0/1:80,0:9:2.90:3,0,50	0/0:93,0:13:6.51:0,7,98	0/1:33,0:32:57.71:58,0,255	1/1:8,6:13:35.95:357,36,0	1/1:13,4:17:50.52:428,51,0	0/1:29,0:24:47.94:48,0,155	1/1:5,12:16:24.54:268,25,0	0/1:21,0:21:12.49:12,0,183	0/1:12,0:12:13.72:14,0,114	0/0:8,0:8:17.38:0,17,115	0/0:15,0:14:10.36:0,10,105	0/0:12,0:12:10.72:0,11,77	0/0:15,0:15:1.29:0,1,72	1/1:2,13:15:23.97:264,24,0	1/1:2,29:32:42.10:468,42,0	0/1:24,0:23:24.36:24,0,231	1/1:12,17:23:56.52:449,57,0	1/1:1,16:17:40.53:348,41,0	0/1:7,0:7:10.15:10,0,74	0/1:3,0:3:6.16:6,0,15	0/1:18,0:17:11.29:11,0,87	0/0:10,0:10:9.88:0,10,83	1/1:2,16:18:17.99:179,18,0	0/0:26,0:26:41.67:0,42,368	0/0:31,0:27:24.41:0,24,296	0/0:9,0:8:18.29:0,18,122
chr10	6867844	.	AG	A	2887.31	PASS	AB=0.992;AC=30;AF=0.536;AN=56;BaseQRankSum=4.209;DP=638;FS=0.854;HRun=1;HaplotypeScore=84.0442;InbreedingCoeff=0.1400;MQ=49.54;MQ0=36;MQRankSum=-3.344;QD=6.08;ReadPosRankSum=2.191;VQSLOD=0.7793;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:29,1:31:68.91:442,69,0	0/0:7,0:7:9.48:0,9,47	0/1:76,3:9:2.90:3,0,50	0/0:90,2:13:5.62:0,6,81	0/1:29,2:30:86.18:86,0,177	1/1:14,0:13:35.33:273,35,0	1/1:17,2:19:56.42:394,56,0	0/1:29,0:24:86.07:86,0,120	1/1:14,3:16:24.36:192,24,0	0/1:21,0:21:55.70:56,0,95	0/1:12,0:12:25.29:25,0,64	0/0:6,0:8:12.86:0,13,77	0/1:15,0:14:1.07:1,0,54	0/0:12,0:12:0.75:0,1,45	0/1:15,0:15:18.38:29,0,18	1/1:15,0:15:23.74:172,24,0	1/1:31,0:31:41.65:301,42,0	0/1:25,0:24:61.39:61,0,152	1/1:26,3:23:56.27:433,56,0	1/1:16,1:17:41.63:304,42,0	0/1:7,0:7:26.16:26,0,51	0/1:3,0:3:9.65:10,0,10	0/1:16,0:15:15.06:15,0,76	0/0:9,0:9:8.84:0,9,57	1/1:16,2:18:17.91:141,18,0	0/0:26,0:26:45.86:0,46,341	0/1:31,0:27:21.76:22,0,169	0/0:9,0:8:18.14:0,18,121
chr10	6868440	.	C	CT	716.20	PASS	AB=0.870;AC=22;AF=0.407;AN=54;BaseQRankSum=-3.572;DP=377;FS=6.333;HRun=16;HaplotypeScore=54.6834;InbreedingCoeff=0.1287;MQ=66.14;MQ0=10;MQRankSum=1.668;QD=3.18;ReadPosRankSum=-0.308;VQSLOD=-0.6640;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:32:43.57:0,44,131	0/0:4,0:5:7.84:0,8,39	0/0:19,0:8:1.71:0,2,7	0/1:9,0:6:0.94:1,0,11	0/1:14,3:18:28.67:29,0,48	1/1:8,13:21:4.66:128,5,0	0/1:3,0:3:0:0,0,0	0/0:34,0:34:33.30:0,33,188	1/1:1,8:9:8.98:72,9,0	0/0:12,0:13:9.62:0,10,52	0/0:13,0:15:15.46:0,15,78	0/1:7,0:7:4.27:4,0,65	0/0:9,0:9:8.32:0,8,49	0/0:9,0:9:5.61:0,6,31	0/1:5,2:7:33.04:33,0,35	1/1:2,6:8:17.93:140,18,0	0/1:16,13:28:44.98:143,0,45	0/1:19,2:24:3.82:4,0,157	1/1:9,6:15:20.71:148,21,0	1/1:10,0:10:5.97:44,6,0	0/1:5,1:6:15.21:15,0,25	./.	0/1:2,1:4:14.53:16,0,15	0/0:6,0:6:11.59:0,12,64	0/1:6,11:17:26.33:95,0,26	0/1:20,0:18:0.80:1,0,93	0/1:14,1:16:1.81:2,0,83	0/0:5,0:5:5.65:0,6,33
chr10	6869519	.	GA	G	551.16	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.083;DP=616;FS=6.912;HRun=11;HaplotypeScore=81.2252;InbreedingCoeff=0.7623;MQ=59.55;MQ0=21;MQRankSum=-0.436;QD=12.53;ReadPosRankSum=0.923;VQSLOD=3.4388;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:10,33:43:79.87:646,80,0	0/0:9,0:9:23.95:0,24,223	0/0:36,0:14:12.16:0,12,168	0/0:19,0:10:14.68:0,15,123	0/0:19,0:18:18.65:0,19,411	0/0:18,0:19:53.96:0,54,551	0/0:21,0:18:45.11:0,45,479	0/0:34,0:32:73.86:0,74,755	0/0:14,0:16:30.99:0,31,285	0/0:25,0:22:47.95:0,48,489	0/0:12,0:12:32.90:0,33,322	0/0:14,0:13:30.07:0,30,313	0/0:22,0:22:63.14:0,63,656	0/0:12,0:12:31.62:0,32,313	0/0:16,1:17:20.47:0,20,422	0/0:16,0:17:31.25:0,31,330	0/0:32,0:33:84.04:0,84,876	0/0:27,0:27:16.41:0,16,648	0/0:19,0:18:45.08:0,45,459	0/0:23,0:20:49.34:0,49,499	0/0:24,1:25:35.49:0,35,572	0/0:10,2:12:2.41:0,2,224	0/0:16,0:15:36.08:0,36,374	0/0:24,1:24:32.47:0,32,536	0/0:17,1:18:14.47:0,14,328	0/0:25,2:24:13.44:0,13,520	0/0:26,0:26:44.77:0,45,429	0/0:25,0:24:42.08:0,42,599
chr10	6869628	.	T	TG	8317.90	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-6.360;DP=523;FS=15.231;HRun=0;HaplotypeScore=67.6215;InbreedingCoeff=0.9990;MQ=87.65;MQ0=0;MQRankSum=-1.438;QD=42.88;ReadPosRankSum=2.099;VQSLOD=3.8178;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,46:46:99:2047,129,0	0/0:9,0:9:27.09:0,27,377	0/0:17,0:17:50.18:0,50,630	0/0:19,0:19:48.07:0,48,594	0/0:14,0:14:39.13:0,39,546	1/1:0,14:14:36.12:576,36,0	1/1:1,25:26:66.22:1055,66,0	0/0:21,0:21:60.20:0,60,840	1/1:0,20:20:51.17:815,51,0	0/0:11,0:11:33.11:0,33,462	0/0:20,0:20:60.19:0,60,822	0/0:15,0:15:45.11:0,45,607	0/0:16,0:16:48.16:0,48,671	0/0:16,0:16:48.16:0,48,670	0/0:20,0:20:60.20:0,60,839	1/1:0,16:16:36.12:576,36,0	1/1:1,31:32:93.32:1475,93,0	0/0:25,0:25:75.23:0,75,1030	1/1:1,16:17:48.16:768,48,0	1/1:0,16:16:42.08:671,42,0	0/0:22,0:22:63.21:0,63,881	0/0:10,0:10:30.10:0,30,420	0/0:16,0:16:45.15:0,45,629	0/0:14,0:14:42.14:0,42,588	1/1:0,7:7:21.07:336,21,0	0/0:23,0:23:69.23:0,69,965	0/0:28,0:28:81.27:0,81,1132	0/0:13,0:13:39.13:0,39,546
chr10	6870048	.	T	TA	1169.43	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=0.638;DP=455;FS=12.815;HRun=6;HaplotypeScore=51.2484;InbreedingCoeff=0.8910;MQ=83.89;MQ0=1;MQRankSum=1.236;QD=26.58;ReadPosRankSum=0.562;VQSLOD=2.8834;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,37:44:89.69:1264,90,0	0/0:10,0:10:27.05:0,27,269	0/0:21,0:20:34.44:0,34,306	0/0:21,0:18:25.93:0,26,264	0/0:24,0:24:57.04:0,57,567	0/0:11,0:11:32.95:0,33,305	0/0:12,0:12:33.05:0,33,323	0/0:20,1:21:10.35:0,10,415	0/0:13,0:13:30.04:0,30,294	0/0:19,0:19:54.11:0,54,546	0/0:18,0:18:48.08:0,48,481	0/0:10,0:10:30.03:0,30,295	0/0:16,0:16:45.08:0,45,447	0/0:11,0:11:27.06:0,27,275	0/0:11,0:11:30.02:0,30,289	0/0:13,0:13:39.02:0,39,373	0/0:13,0:13:36.07:0,36,360	0/0:27,0:27:69.15:0,69,704	0/0:9,0:9:21.05:0,21,214	0/0:6,0:6:9.01:0,9,92	0/0:15,0:15:42.05:0,42,413	0/0:18,0:18:51.05:0,51,507	0/0:10,0:10:30.03:0,30,291	0/0:27,0:27:72.14:0,72,726	0/0:11,0:11:26.99:0,27,261	0/0:15,0:15:36.08:0,36,367	0/0:23,0:23:60.09:0,60,596	0/0:6,0:6:18.04:0,18,184
chr10	6870242	.	C	CGAGA	2553.74	PASS	AB=0.688;AC=23;AF=0.411;AN=56;BaseQRankSum=-1.612;DP=357;FS=24.618;HRun=0;HaplotypeScore=76.7204;InbreedingCoeff=0.8379;MQ=76.63;MQ0=0;MQRankSum=-3.482;QD=17.73;ReadPosRankSum=2.301;VQSLOD=1.1652;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:20:13.53:148,14,0	0/0:5,0:5:9:0,9,125	0/0:12,0:11:24.96:0,25,375	0/0:19,0:18:38.57:0,39,386	0/0:12,0:12:27.08:0,27,456	1/1:0,10:11:12.04:306,12,0	1/1:6,5:12:12.04:305,12,0	0/0:19,0:19:36.12:0,36,598	1/1:0,10:10:15.05:382,15,0	0/0:8,0:8:18.05:0,18,263	0/0:13,0:13:30.09:0,30,474	0/0:13,0:13:24.53:0,25,363	0/0:8,0:8:15.05:0,15,270	0/0:6,0:6:6.31:0,6,63	0/0:14,0:14:24.08:0,24,409	1/1:1,3:6:3.01:76,3,0	1/1:3,12:16:24.08:573,24,0	0/0:22,0:22:57.17:0,57,977	1/1:4,5:9:21.03:385,21,0	1/1:2,5:8:6.02:133,6,0	0/0:15,0:15:33.11:0,33,565	0/0:16,0:16:24.08:0,24,406	0/0:15,0:15:21.07:0,21,357	0/0:15,0:15:27.09:0,27,484	1/1:2,7:9:12.04:294,12,0	0/1:6,0:11:5.37:14,0,5	1/1:6,0:21:6.47:75,6,0	1/1:1,0:11:10.86:70,11,0
chr10	6872541	.	A	AG	1347.97	PASS	AB=0.962;AC=19;AF=0.380;AN=50;BaseQRankSum=-4.365;DP=319;FS=4.138;HRun=0;HaplotypeScore=40.9497;InbreedingCoeff=-0.0057;MQ=54.00;MQ0=21;MQRankSum=1.806;QD=7.62;ReadPosRankSum=1.413;VQSLOD=2.8716;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:22:34.62:143,0,35	./.	0/0:34,0:4:10.97:0,11,74	0/0:19,0:5:10.04:0,10,61	0/1:7,0:6:8.55:9,0,32	0/0:8,0:8:20:0,20,129	0/0:12,0:12:17.58:0,18,119	0/1:15,0:14:9.27:196,0,9	0/0:12,0:11:10.25:0,10,126	0/1:11,1:11:61.35:102,0,61	0/1:3,0:3:9.54:16,0,10	0/1:14,0:14:19.16:114,0,19	1/1:4,0:4:5.94:68,6,0	0/1:9,0:9:35.45:81,0,35	0/1:4,0:3:7.66:11,0,8	0/0:6,0:6:11.28:0,11,67	0/0:21,0:20:36.33:0,36,220	0/1:20,0:19:47.43:182,0,47	0/0:25,0:21:55.35:0,55,410	./.	1/1:9,0:9:18.97:165,19,0	0/0:2,0:1:2.96:0,3,19	./.	0/1:12,8:19:33.21:33,0,65	0/0:3,0:3:8.68:0,9,63	1/1:13,0:13:1.01:189,1,0	0/1:15,1:14:49.09:74,0,49	1/1:7,0:6:17.76:125,18,0
chr10	6873797	.	ATTTT	A	2479.81	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=8.569;DP=510;FS=0.482;HRun=18;HaplotypeScore=145.6477;InbreedingCoeff=0.9761;MQ=63.62;MQ0=15;MQRankSum=-5.061;QD=17.97;ReadPosRankSum=7.499;VQSLOD=0.0232;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:53.70:0,54,745	0/0:8,0:8:17.28:0,17,277	0/0:33,0:12:12.62:0,13,148	0/0:28,0:19:18.30:0,18,272	0/0:21,0:28:54.54:0,55,827	1/1:9,9:19:35.39:400,35,0	1/1:8,6:13:13.85:181,14,0	0/0:16,0:17:32.58:0,33,573	1/1:3,8:10:17.28:218,17,0	0/0:22,0:25:42.33:0,42,471	0/0:16,0:22:55.18:0,55,827	0/0:12,0:12:24.97:0,25,455	0/0:8,0:11:22.89:0,23,401	0/0:14,0:16:34.23:0,34,522	0/0:15,0:15:30.27:0,30,514	1/1:1,7:8:20.72:255,21,0	1/1:10,15:24:43.46:527,43,0	0/0:12,0:15:40.02:0,40,773	1/1:14,7:20:18.46:250,18,0	1/1:9,9:18:30:352,30,0	0/0:8,0:8:17.73:0,18,198	0/0:15,0:15:33.05:0,33,519	0/0:17,0:13:28.78:0,29,410	0/0:15,0:16:17.88:0,18,266	1/1:7,15:21:41.35:503,41,0	0/0:22,0:23:60.29:0,60,965	0/0:16,0:19:36.11:0,36,615	0/0:8,0:8:11.78:0,12,181
chr10	6873829	.	TC	T	6349.17	PASS	AB=0.607;AC=51;AF=0.944;AN=54;BaseQRankSum=-1.695;DP=304;FS=0.000;HRun=2;HaplotypeScore=70.9804;InbreedingCoeff=0.3937;MQ=42.86;MQ0=16;MQRankSum=1.844;QD=21.74;ReadPosRankSum=2.224;VQSLOD=4.6940;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:6,11:16:11.30:248,0,11	1/1:1,3:4:8.94:91,9,0	1/1:4,0:1:0.47:1,0,0	0/0:5,0:3:4.24:0,4,39	1/1:1,11:12:17.88:156,18,0	1/1:1,10:10:24.08:305,24,0	1/1:4,5:7:9.03:114,9,0	1/1:3,8:8:24.04:289,24,0	1/1:0,13:11:27.09:343,27,0	1/1:2,12:12:32.70:389,33,0	1/1:1,8:9:21.07:266,21,0	1/1:0,8:8:9.03:115,9,0	1/1:1,4:5:9.03:113,9,0	1/1:0,7:7:15.05:190,15,0	1/1:2,7:9:19.61:232,20,0	1/1:0,14:14:33.11:419,33,0	1/1:4,17:21:36.11:454,36,0	1/1:5,7:8:18.06:230,18,0	1/1:1,17:18:42.03:486,42,0	1/1:3,10:13:33:357,33,0	1/1:5,2:6:11.99:112,12,0	1/1:2,6:7:5.98:58,6,0	1/1:2,13:15:27.02:323,27,0	1/1:3,8:10:14.98:170,15,0	1/1:6,15:20:34.09:509,34,0	1/1:0,10:10:24.02:264,24,0	1/1:2,7:9:8.95:115,9,0	./.
chr10	6874079	.	ATTACTG	A	7899.96	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=14.813;DP=592;FS=4.761;HRun=0;HaplotypeScore=130.6257;InbreedingCoeff=0.9893;MQ=89.24;MQ0=0;MQRankSum=-14.813;QD=58.95;ReadPosRankSum=3.667;VQSLOD=4.9379;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,105,3726	0/0:3,0:3:9.03:0,9,330	0/0:22,0:22:62.99:0,63,1820	0/0:31,0:31:87.77:0,88,2888	0/0:14,0:14:39.12:0,39,1257	1/1:2,17:19:51.17:1255,51,0	1/1:1,11:12:27.09:664,27,0	0/0:23,0:23:63.22:0,63,2147	1/1:2,21:22:60.21:1476,60,0	0/0:23,0:23:66.22:0,66,2310	0/0:20,0:20:54.19:0,54,1790	0/0:21,0:21:63.22:0,63,2306	0/0:12,0:12:36.12:0,36,1294	0/0:26,0:26:78.27:0,78,2843	0/0:19,0:19:57.20:0,57,2008	1/1:1,14:15:36.12:886,36,0	1/1:2,21:23:39.13:958,39,0	0/0:14,0:14:42.14:0,42,1539	1/1:1,11:12:33.11:759,33,0	1/1:0,17:17:45.15:1089,45,0	0/0:56,0:56:99:0,166,5744	0/0:17,0:17:48.16:0,48,1649	0/0:14,0:14:39.13:0,39,1381	0/0:35,0:35:99:0,102,3683	1/1:0,13:13:33.11:812,33,0	0/0:36,0:36:99:0,108,3744	0/0:29,0:29:84.29:0,84,3004	0/0:8,0:8:21.07:0,21,769
chr10	6874531	.	G	GA	4684.36	PASS	AB=0.591;AC=34;AF=0.607;AN=56;BaseQRankSum=-7.750;DP=456;FS=3.280;HRun=11;HaplotypeScore=50.7506;InbreedingCoeff=0.7912;MQ=59.98;MQ0=10;MQRankSum=1.529;QD=16.44;ReadPosRankSum=-1.624;VQSLOD=5.1303;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,18:24:3.60:383,4,0	1/1:0,9:9:21.04:213,21,0	0/0:15,0:4:8.90:0,9,64	0/0:16,0:6:14.92:0,15,111	0/1:7,13:20:10.48:247,0,10	0/0:25,0:25:38.11:0,38,440	0/0:15,0:15:29.78:0,30,232	1/1:3,15:16:15.79:325,16,0	0/0:17,0:18:40.82:0,41,304	1/1:5,13:19:41.92:411,42,0	1/1:9,9:17:21.82:251,22,0	1/1:3,6:9:15.02:148,15,0	1/1:3,6:9:12.02:122,12,0	1/1:2,10:13:20.88:197,21,0	1/1:3,17:20:9.66:281,10,0	0/0:7,0:6:14.94:0,15,116	0/0:13,0:13:35.86:0,36,278	1/1:2,20:23:41.24:450,41,0	0/0:21,0:20:22.26:0,22,224	0/0:20,1:20:17.32:0,17,312	0/1:4,14:19:17.25:239,0,17	1/1:3,8:11:18.04:183,18,0	1/1:2,10:12:17.83:183,18,0	1/1:3,13:16:39.08:396,39,0	0/0:17,0:17:32.85:0,33,255	1/1:6,7:13:16.53:145,17,0	1/1:8,18:27:38.24:421,38,0	1/1:1,4:5:9.02:91,9,0
chr10	6874680	.	G	GATAT	10439.89	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-6.229;DP=438;FS=0.867;HRun=0;HaplotypeScore=82.7348;InbreedingCoeff=0.9553;MQ=65.56;MQ0=2;MQRankSum=0.047;QD=38.81;ReadPosRankSum=-1.488;VQSLOD=4.7512;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:63.16:0,63,1003	1/1:0,6:7:12.04:305,12,0	0/0:12,0:10:7.08:0,7,295	0/0:9,0:5:5.97:0,6,44	1/1:1,24:27:48.16:1219,48,0	0/0:21,0:21:54.11:0,54,913	0/0:9,0:9:24.04:0,24,385	1/1:7,24:33:87.06:1553,87,0	0/0:12,0:12:36.08:0,36,544	1/1:1,15:16:45.12:955,45,0	1/1:2,18:21:45.15:1142,45,0	1/1:1,11:12:24.08:609,24,0	1/1:3,5:9:15.05:381,15,0	1/1:2,8:11:23.87:546,24,0	1/1:6,15:21:36.12:883,36,0	0/0:10,0:10:30.10:0,30,514	0/0:17,0:17:42.10:0,42,698	1/1:2,11:14:15.05:334,15,0	0/0:14,0:14:36.12:0,36,616	0/0:19,0:19:48.14:0,48,780	1/1:1,9:12:23.87:546,24,0	1/1:0,5:5:12.04:304,12,0	1/1:2,10:12:18.06:456,18,0	1/1:1,10:13:23.87:546,24,0	0/0:17,0:17:39.13:0,39,678	1/1:1,0:14:36.97:242,37,0	1/1:2,0:32:74.44:332,74,0	1/1:1,0:9:18.73:87,19,0
chr10	6877251	.	TGCTTTTTTTTTTTTTCCTCCCCCCCCCCCCCCC	T	1848.86	PASS	AC=22;AF=0.440;AN=50;BaseQRankSum=1.869;DP=310;FS=8.238;HRun=0;HaplotypeScore=192.5870;InbreedingCoeff=0.7020;MQ=50.39;MQ0=4;MQRankSum=-1.004;QD=23.11;ReadPosRankSum=0.216;VQSLOD=1.6307;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:21:60.21:0,60,3716	1/1:3,4:7:6.02:524,6,0	0/0:30,0:9:21.07:0,21,578	0/0:24,0:12:21.54:0,22,739	1/1:6,6:12:3.01:262,3,0	0/0:13,0:12:36.12:0,36,2007	0/0:8,0:8:24.08:0,24,1361	1/1:3,0:3:6.01:78,6,0	0/0:12,0:10:27.09:0,27,1890	./.	1/1:2,0:2:2.97:20,3,0	./.	1/1:3,3:6:3.01:262,3,0	1/1:4,7:7:3.01:262,3,0	./.	0/0:12,0:12:27.09:0,27,1646	0/0:15,0:14:32.20:0,32,1598	1/1:2,3:4:3.01:262,3,0	0/0:16,0:11:30.10:0,30,1309	0/0:15,0:14:42.14:0,42,2013	1/1:5,0:5:3.01:42,3,0	1/1:10,0:8:2.98:21,3,0	1/1:5,7:12:3.01:262,3,0	1/1:7,0:5:2.97:20,3,0	0/0:10,0:10:30.10:0,30,1990	0/0:16,0:16:48.16:0,48,2528	0/0:13,0:12:36.12:0,36,2095	0/0:4,0:4:12.04:0,12,863
chr10	6877282	.	C	CTG	31.03	PASS	AB=0.500;AC=7;AF=0.159;AN=44;BaseQRankSum=0.542;DP=252;FS=4.455;HRun=0;HaplotypeScore=59.3391;InbreedingCoeff=0.4857;MQ=42.29;MQ0=39;MQRankSum=-1.179;QD=0.46;ReadPosRankSum=0.988;VQSLOD=1.0859;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:6:17.96:0,18,160	0/0:4,0:4:5.68:0,6,28	1/1:39,0:5:0.46:1,0,0	0/0:32,0:10:8.47:0,8,130	0/0:6,0:6:2.84:0,3,14	0/0:6,0:5:9.01:0,9,98	0/0:10,0:3:9:0,9,85	./.	0/0:7,0:5:12.04:0,12,160	0/1:0,3:3:0:0,0,0	./.	./.	0/0:6,0:4:2.84:0,3,14	1/1:9,0:3:2.90:16,3,0	./.	0/0:7,0:5:9.02:0,9,108	0/0:18,0:15:17.91:0,18,152	0/0:7,0:3:2.84:0,3,14	0/0:7,0:5:9.03:0,9,113	0/0:7,0:6:17.89:0,18,142	1/1:16,0:11:8.94:108,9,0	./.	0/0:9,0:7:2.84:0,3,14	./.	0/0:10,0:10:24.02:0,24,260	0/0:11,0:7:18.05:0,18,229	0/0:10,0:9:18.06:0,18,248	0/0:8,0:7:18.06:0,18,246
chr10	6877539	.	TG	T	3416.57	PASS	AC=16;AF=0.571;AN=28;BaseQRankSum=3.028;DP=283;FS=6.167;HRun=7;HaplotypeScore=62.5634;InbreedingCoeff=0.9873;MQ=109.56;MQ0=0;MQRankSum=-3.581;QD=24.94;ReadPosRankSum=2.510;VQSLOD=4.2494;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,126,1557	./.	0/0:31,0:30:69.09:0,69,759	0/0:15,1:15:15.60:0,16,387	./.	1/1:1,14:15:39.09:397,39,0	1/1:1,19:20:48.11:490,48,0	./.	1/1:0,22:22:54.12:551,54,0	./.	./.	./.	./.	./.	./.	1/1:2,6:8:12.03:122,12,0	1/1:0,26:26:66.15:673,66,0	./.	1/1:3,17:20:48.11:490,48,0	1/1:1,12:13:39.06:387,39,0	./.	./.	./.	./.	1/1:2,11:13:30.07:306,30,0	0/0:19,0:19:45.14:0,45,565	0/0:12,0:12:36.11:0,36,448	0/0:20,0:20:51.14:0,51,625
chr10	6877912	.	C	CTTATTTATTTATTTAT	16518.78	PASS	AC=24;AF=0.857;AN=28;BaseQRankSum=-1.515;DP=228;FS=3.864;HRun=0;HaplotypeScore=156.9776;InbreedingCoeff=0.8896;MQ=94.81;MQ0=0;MQRankSum=-5.684;QD=86.94;ReadPosRankSum=3.626;VQSLOD=4.4878;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:21:15.05:1011,15,0	./.	0/0:22,0:22:33.55:0,34,827	0/0:16,0:16:6.71:0,7,530	./.	1/1:9,17:27:51.17:3282,51,0	1/1:9,0:9:12.04:595,12,0	./.	1/1:4,8:12:15.05:822,15,0	./.	./.	./.	./.	./.	./.	1/1:2,5:7:15.05:999,15,0	1/1:4,13:19:15.05:1130,15,0	./.	1/1:12,7:20:39.13:1926,39,0	1/1:5,7:14:18.06:1151,18,0	./.	./.	./.	./.	1/1:7,11:17:24.08:1384,24,0	1/1:11,0:16:30.09:1652,30,0	1/1:8,0:8:24.06:846,24,0	1/1:19,0:19:45.15:1720,45,0
chr10	6877926	.	T	TA	461.42	PASS	AB=0.809;AC=4;AF=0.143;AN=28;BaseQRankSum=8.543;DP=171;FS=4.407;HRun=0;HaplotypeScore=97.2168;InbreedingCoeff=-0.2480;MQ=113.91;MQ0=0;MQRankSum=-6.425;QD=7.82;ReadPosRankSum=4.691;VQSLOD=3.1958;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:8:15.23:0,15,247	./.	0/0:20,0:21:54.85:0,55,708	0/0:14,0:14:24.32:0,24,308	./.	0/1:17,0:17:7.34:7,0,247	0/1:7,3:10:67.70:68,0,266	./.	0/0:9,0:9:3.61:0,4,121	./.	./.	./.	./.	./.	./.	0/0:6,0:6:0.53:0,1,112	0/0:7,0:7:3.37:0,3,115	./.	0/0:17,0:17:30.43:0,30,439	0/0:11,0:11:3.84:0,4,183	./.	./.	./.	./.	0/0:9,0:9:3.63:0,4,175	0/0:10,0:10:24.24:0,24,343	0/1:11,3:14:99:100,0,397	0/1:8,10:18:99:377,0,230
chr10	6878383	.	C	CTT	2074.37	PASS	AB=0.750;AC=25;AF=0.833;AN=30;BaseQRankSum=-1.369;DP=232;FS=3.125;HRun=14;HaplotypeScore=72.2206;InbreedingCoeff=0.3314;MQ=67.56;MQ0=0;MQRankSum=-2.416;QD=9.18;ReadPosRankSum=0.225;VQSLOD=1.8721;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:12,1:30:24.29:93,0,24	./.	0/1:7,0:5:0.02:0,0,0	0/0:4,0:4:8.96:0,9,69	./.	1/1:4,7:14:12.06:247,12,0	1/1:5,9:20:37.20:393,37,0	./.	1/1:9,7:17:14.31:127,14,0	./.	./.	1/1:1,0:1:3:29,3,0	./.	./.	./.	1/1:5,1:6:12.04:151,12,0	1/1:7,16:25:32.39:398,32,0	./.	1/1:12,5:16:18.06:234,18,0	1/1:9,2:12:17.34:163,17,0	./.	./.	./.	./.	1/1:6,10:17:12:138,12,0	1/1:10,0:23:16.57:130,17,0	0/1:8,0:22:7.36:34,0,7	1/1:3,0:13:11.86:42,12,0
chr10	6878535	.	C	CTG	4074.53	PASS	AB=1.000;AC=26;AF=0.464;AN=56;BaseQRankSum=10.356;DP=397;FS=78.697;HRun=0;HaplotypeScore=162.8115;InbreedingCoeff=0.7219;MQ=58.17;MQ0=13;MQRankSum=-11.199;QD=32.86;ReadPosRankSum=3.553;VQSLOD=0.4834;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:83.65:0,84,1329	1/1:2,0:2:2.92:9,3,0	0/0:37,0:12:15.26:0,15,242	0/0:24,0:9:17.84:0,18,182	1/1:9,0:9:4.08:372,4,0	0/0:12,0:12:33.11:0,33,538	0/0:16,0:15:39.13:0,39,636	0/1:17,0:8:24.93:298,0,25	0/0:18,0:18:48.15:0,48,755	1/1:10,0:9:8.12:217,8,0	0/1:9,0:9:19.17:251,0,19	1/1:11,0:11:24.08:464,24,0	1/1:7,0:7:19.88:362,20,0	1/1:10,0:10:4.68:386,5,0	1/1:10,1:11:8.19:499,8,0	0/0:8,0:8:18.06:0,18,294	0/0:31,0:31:75.23:0,75,1183	1/1:6,1:8:21.07:392,21,0	0/0:21,0:17:45.13:0,45,675	0/0:14,0:14:42.10:0,42,644	1/1:9,1:8:6.02:120,6,0	1/1:3,0:3:4.27:115,4,0	1/1:11,1:12:25.60:420,26,0	1/1:5,0:5:7.31:170,7,0	0/0:13,0:13:27.09:0,27,440	0/0:20,0:20:48.13:0,48,713	0/0:18,0:18:54.17:0,54,856	0/0:8,0:8:21.07:0,21,343
chr10	6879888	.	GT	G	6543.08	PASS	AB=0.673;AC=50;AF=0.893;AN=56;BaseQRankSum=0.352;DP=451;FS=12.370;HRun=12;HaplotypeScore=52.8000;InbreedingCoeff=0.2778;MQ=72.22;MQ0=1;MQRankSum=-0.891;QD=14.80;ReadPosRankSum=3.789;VQSLOD=4.4584;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,21:27:40.13:388,40,0	1/1:0,5:5:14.94:116,15,0	0/1:16,1:17:7.15:7,0,148	0/0:7,1:7:11.97:0,12,102	1/1:6,14:20:11.36:271,11,0	0/1:3,8:12:1.53:163,0,2	1/1:4,11:16:25.90:192,26,0	1/1:6,19:28:51.30:358,51,0	1/1:4,7:11:17.92:139,18,0	1/1:5,10:15:29.84:230,30,0	1/1:2,6:9:19.88:136,20,0	1/1:1,11:12:32.87:255,33,0	1/1:1,8:10:25.94:192,26,0	1/1:2,8:10:20.91:163,21,0	1/1:4,19:23:52.39:415,52,0	1/1:2,15:17:38.83:302,39,0	1/1:2,24:26:38.29:480,38,0	1/1:4,21:25:10.92:389,11,0	0/1:6,11:17:49.51:209,0,50	1/1:6,13:19:9.36:204,9,0	1/1:4,8:12:23.89:186,24,0	1/1:4,14:18:38.82:302,39,0	1/1:3,17:21:47.80:372,48,0	1/1:3,10:13:29.88:232,30,0	1/1:1,11:13:34.19:260,34,0	1/1:2,14:17:7.44:231,7,0	1/1:2,15:18:7.46:230,7,0	0/1:2,6:9:7.47:122,0,7
chr10	6880856	.	TTCC	T	14203.56	PASS	AB=0.618;AC=51;AF=0.911;AN=56;BaseQRankSum=3.876;DP=580;FS=23.139;HRun=0;HaplotypeScore=108.1415;InbreedingCoeff=0.7235;MQ=60.17;MQ0=10;MQRankSum=-1.115;QD=27.37;ReadPosRankSum=4.001;VQSLOD=3.1858;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,28:36:57.19:813,57,0	1/1:9,0:9:15.01:176,15,0	0/0:33,0:19:36.12:0,36,658	0/0:28,0:18:16.45:0,16,503	1/1:19,0:19:45.11:622,45,0	1/1:4,21:25:51.17:728,51,0	1/1:9,16:25:36.12:518,36,0	1/1:26,0:26:26.58:384,27,0	1/1:7,14:21:36.12:511,36,0	1/1:11,0:10:15.05:215,15,0	1/1:12,0:12:24.08:345,24,0	1/1:16,0:16:42.14:597,42,0	1/1:16,0:16:33.07:474,33,0	1/1:19,0:19:44.82:608,45,0	1/1:17,0:16:42.14:602,42,0	1/1:6,17:22:51.17:732,51,0	1/1:3,17:20:44.67:639,45,0	1/1:22,0:21:8.18:727,8,0	0/1:8,13:20:17.79:416,0,18	1/1:4,15:19:35.95:419,36,0	1/1:37,0:35:75.17:1003,75,0	1/1:15,0:14:30.10:431,30,0	1/1:16,0:16:30.02:369,30,0	1/1:39,0:39:93.23:1303,93,0	1/1:5,18:23:39.13:555,39,0	1/1:14,0:14:33.10:458,33,0	1/1:14,0:14:30.10:431,30,0	1/1:4,0:4:9.03:128,9,0
chr10	6880858	.	CCT	C	783.40	PASS	AB=0.992;AC=26;AF=0.464;AN=56;BaseQRankSum=13.937;DP=576;FS=0.000;HRun=0;HaplotypeScore=141.9586;InbreedingCoeff=-0.6906;MQ=59.63;MQ0=12;MQRankSum=-1.477;QD=1.55;ReadPosRankSum=12.678;VQSLOD=-0.2503;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:34,1:35:52.84:53,0,156	0/0:9,0:9:5.78:0,6,146	0/0:35,0:18:29.16:0,29,816	0/0:27,0:17:42.92:0,43,683	0/1:20,0:20:39.46:39,0,101	1/1:24,1:25:12.62:80,13,0	0/1:24,0:24:27.52:28,0,214	0/1:24,0:24:4.20:4,0,313	0/1:18,1:19:33.62:34,0,96	0/1:11,0:10:7.25:7,0,125	0/1:11,0:11:17.80:28,0,18	0/1:15,1:16:29.69:45,0,30	0/1:17,0:17:26.19:26,0,138	0/1:21,0:21:37.81:38,0,106	0/1:17,0:16:26.29:54,0,26	0/1:23,0:22:54.10:54,0,102	0/1:20,0:20:38.22:50,0,38	0/1:22,0:21:61.75:62,0,69	0/1:20,0:18:8.62:9,0,171	0/1:18,1:19:15.52:16,0,198	0/1:36,0:34:59.94:60,0,164	0/1:15,0:14:32.95:33,0,48	0/1:16,0:16:15.47:15,0,158	0/1:39,0:39:99:104,0,135	0/1:22,0:22:38.20:38,0,81	0/1:14,0:14:27:27,0,78	0/1:15,0:15:27.16:27,0,116	0/1:4,0:4:7.37:7,0,29
chr10	6881289	.	AAT	A	6163.51	PASS	AB=1.000;AC=52;AF=0.929;AN=56;BaseQRankSum=0.651;DP=439;FS=13.712;HRun=0;HaplotypeScore=81.8725;InbreedingCoeff=0.4867;MQ=65.47;MQ0=1;MQRankSum=-1.143;QD=14.43;ReadPosRankSum=2.733;VQSLOD=3.7327;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:31,0:30:54.56:291,55,0	1/1:4,0:4:8.67:31,9,0	0/1:9,0:7:7.47:7,0,43	0/0:12,0:8:11.23:0,11,88	1/1:18,0:18:29.08:220,29,0	1/1:10,22:32:42.13:517,42,0	1/1:1,10:11:21.07:258,21,0	1/1:29,0:29:63.24:354,63,0	1/1:3,10:13:21.07:259,21,0	1/1:20,0:20:36.78:182,37,0	1/1:21,1:22:50.99:250,51,0	1/1:17,0:17:29.74:157,30,0	1/1:11,0:11:20.77:77,21,0	1/1:15,0:15:23.37:87,23,0	1/1:12,0:12:23.37:87,23,0	1/1:1,9:11:14.88:162,15,0	1/1:3,17:21:29.93:347,30,0	1/1:15,0:15:31.56:147,32,0	1/1:0,10:10:30.04:322,30,0	1/1:4,18:22:7.65:468,8,0	1/1:8,1:9:15.79:85,16,0	0/1:8,0:8:2.51:42,0,3	1/1:10,0:10:21.40:95,21,0	1/1:9,0:9:15.58:58,16,0	1/1:4,14:18:36.11:443,36,0	1/1:22,0:22:59.81:550,60,0	1/1:17,0:17:41.73:409,42,0	1/1:11,0:11:21.07:257,21,0
chr10	6881290	.	AT	A	8409.19	PASS	AB=1.000;AC=46;AF=0.821;AN=56;BaseQRankSum=3.006;DP=434;FS=20.148;HRun=1;HaplotypeScore=64.8808;InbreedingCoeff=0.2202;MQ=65.78;MQ0=1;MQRankSum=-1.106;QD=20.46;ReadPosRankSum=6.533;VQSLOD=3.4887;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,0:30:56.21:359,56,0	1/1:1,3:4:12.03:152,12,0	0/0:9,0:7:8.91:0,9,70	0/0:14,0:10:19.95:0,20,171	1/1:7,11:18:48.89:612,49,0	0/1:30,0:30:99:113,0,112	1/1:11,0:11:0.76:64,1,0	1/1:0,29:29:79.32:899,79,0	0/1:13,0:13:45.26:58,0,45	1/1:4,15:19:51.08:618,51,0	1/1:1,21:22:62.68:713,63,0	1/1:6,10:16:46.33:529,46,0	1/1:0,11:11:24.08:333,24,0	1/1:0,14:14:30.10:407,30,0	1/1:0,12:12:33.11:438,33,0	0/1:11,0:11:8.01:39,0,8	0/1:21,0:21:37.01:81,0,37	1/1:4,11:15:42.01:514,42,0	1/1:10,0:10:23.91:150,24,0	0/1:22,0:22:29.53:233,0,30	1/1:1,8:9:17.79:220,18,0	1/1:4,3:7:16.45:201,16,0	1/1:0,9:9:26.99:319,27,0	1/1:0,9:9:21.07:281,21,0	0/1:18,0:18:53.06:102,0,53	1/1:6,10:22:65.05:442,65,0	1/1:4,8:17:40.25:313,40,0	1/1:4,7:11:26.48:218,26,0
chr10	6881292	.	AT	A	999.24	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=10.520;DP=424;FS=12.504;HRun=1;HaplotypeScore=89.3211;InbreedingCoeff=0.8217;MQ=64.88;MQ0=1;MQRankSum=-7.273;QD=12.81;ReadPosRankSum=1.062;VQSLOD=1.2903;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:31,0:30:54.33:282,54,0	0/0:4,0:4:10.31:0,10,47	0/0:8,0:6:12.46:0,12,131	0/0:13,0:9:20.90:0,21,293	0/0:18,0:18:34.96:0,35,190	0/0:28,0:28:27.42:0,27,199	0/0:11,0:11:9.21:0,9,52	0/0:30,0:30:73.86:0,74,375	0/0:13,0:13:15.23:0,15,127	0/0:19,0:19:25.77:0,26,181	0/0:23,0:23:22.37:0,22,212	0/0:13,0:13:32.43:0,32,122	0/0:11,0:11:13.51:0,14,56	0/0:14,0:14:21.64:0,22,80	0/0:13,0:13:27.47:0,27,113	0/0:11,0:11:2.50:0,3,39	0/0:21,0:21:12.89:0,13,119	0/0:15,0:15:21.89:0,22,82	0/0:10,0:10:16.47:0,16,66	0/0:20,0:20:34.54:0,35,186	0/0:9,0:9:10.79:0,11,36	0/0:7,0:7:18.71:0,19,123	0/0:9,0:9:18.35:0,18,79	0/0:8,0:8:0.15:0,0,31	0/0:18,0:18:22.65:0,23,151	1/1:14,9:23:55.16:395,55,0	1/1:8,8:16:38.14:310,38,0	1/1:1,7:8:20.95:169,21,0
chr10	6885331	.	GACA	G	1254.08	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.928;DP=674;FS=6.178;HRun=0;HaplotypeScore=95.1713;InbreedingCoeff=0.9983;MQ=76.40;MQ0=0;MQRankSum=-4.656;QD=29.86;ReadPosRankSum=3.440;VQSLOD=3.4129;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,41:42:81.19:1349,81,0	0/0:20,0:20:57.20:0,57,1292	0/0:20,0:20:59.23:0,59,1258	0/0:18,0:18:48.12:0,48,908	0/0:17,0:17:51.16:0,51,1077	0/0:19,0:19:51.18:0,51,1138	0/0:35,0:35:99:0,99,2199	0/0:20,0:20:54.19:0,54,1176	0/0:27,0:27:81.28:0,81,1833	0/0:12,0:12:36.12:0,36,776	0/0:9,0:9:27.09:0,27,580	0/0:30,0:30:87.30:0,87,1957	0/0:25,0:25:75.26:0,75,1669	0/0:17,0:17:51.18:0,51,1156	0/0:27,0:27:81.28:0,81,1836	0/0:20,0:20:57.20:0,57,1274	0/0:48,0:48:99:0,141,3113	0/0:26,0:26:75.24:0,75,1628	0/0:23,0:23:60.21:0,60,1338	0/0:19,0:19:57.18:0,57,1248	0/0:50,0:50:99:0,148,3331	0/0:15,0:15:45.15:0,45,983	0/0:23,0:23:63.16:0,63,1328	0/0:34,0:34:99:0,102,2290	0/0:23,0:23:66.23:0,66,1476	0/0:28,0:28:84.29:0,84,1884	0/0:17,0:17:51.15:0,51,1033	0/0:10,0:10:30.10:0,30,660
chr10	6887433	.	GAGAGA	G	449.85	PASS	AB=0.944;AC=23;AF=0.426;AN=54;BaseQRankSum=1.436;DP=313;FS=9.325;HRun=0;HaplotypeScore=47.9333;InbreedingCoeff=0.2390;MQ=53.91;MQ0=36;MQRankSum=-0.609;QD=2.78;ReadPosRankSum=0.238;VQSLOD=-0.5422;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:4:1.83:3,2,0	0/1:7,0:7:32.23:32,0,39	0/0:13,0:8:20.83:0,21,159	0/0:23,0:9:10.27:0,10,62	0/0:13,0:12:2.99:0,3,24	0/1:2,0:2:0:0,0,0	1/1:16,0:15:5.57:83,6,0	0/0:21,0:17:11.96:0,12,83	1/1:10,0:11:6.59:36,7,0	0/1:7,0:6:10.87:11,0,132	./.	0/0:9,0:11:6.47:0,6,162	0/0:5,0:6:15.05:0,15,301	0/1:9,0:8:3.06:3,0,46	0/1:8,0:9:18.16:18,0,102	1/1:7,1:10:12.04:220,12,0	1/1:8,8:13:3.48:58,3,0	0/0:11,0:9:7.75:0,8,138	0/1:14,0:13:21.07:43,0,21	0/0:4,5:9:1.25:0,1,4	0/0:11,0:9:7.80:0,8,103	0/0:8,0:6:0.77:0,1,2	1/1:11,0:14:0.16:0,0,0	0/0:13,0:11:5.19:0,5,48	1/1:9,0:7:5.05:62,5,0	0/1:14,0:15:7.90:8,0,37	0/0:7,0:5:4.52:0,5,95	1/1:13,0:8:1.91:21,2,0
chr10	6890832	.	A	AAG	11075.35	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-4.941;DP=446;FS=6.395;HRun=0;HaplotypeScore=57.7989;InbreedingCoeff=0.8483;MQ=70.78;MQ0=3;MQRankSum=-3.791;QD=26.00;ReadPosRankSum=2.132;VQSLOD=5.3931;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,0:33:47.56:323,48,0	1/1:1,13:15:26.87:364,27,0	0/0:13,0:7:14.67:0,15,120	0/0:7,0:7:11.65:0,12,76	1/1:0,12:14:38.93:570,39,0	1/1:0,8:9:11.95:157,12,0	1/1:1,7:8:12.04:206,12,0	1/1:1,17:20:60.01:727,60,0	1/1:0,14:17:11.91:207,12,0	1/1:0,17:19:57.03:653,57,0	1/1:0,16:19:41.87:574,42,0	1/1:1,10:12:11.99:174,12,0	1/1:1,12:14:21.54:355,22,0	1/1:2,11:15:21.07:360,21,0	1/1:0,12:15:32.98:500,33,0	1/1:0,14:16:27.02:428,27,0	1/1:1,18:20:36.04:585,36,0	1/1:1,21:23:42.01:628,42,0	1/1:5,15:22:56.85:660,57,0	1/1:0,15:18:44.46:485,44,0	1/1:0,9:11:15.05:244,15,0	1/1:0,11:13:29.99:274,30,0	1/1:1,9:12:20.94:294,21,0	1/1:0,6:7:5.48:101,5,0	1/1:0,11:14:27.02:418,27,0	1/1:0,13:15:36.03:511,36,0	1/1:1,13:17:33.58:521,34,0	1/1:0,22:23:45.15:756,45,0
chr10	6891635	.	CTGTGTGTGTGTGTGTGTG	C	1484.91	PASS	AB=0.833;AC=24;AF=0.444;AN=54;BaseQRankSum=5.198;DP=529;FS=2.013;HRun=0;HaplotypeScore=221.6722;InbreedingCoeff=0.5024;MQ=71.55;MQ0=12;MQRankSum=-2.256;QD=6.32;ReadPosRankSum=-0.169;VQSLOD=2.5929;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:35:51.16:0,51,2780	1/1:6,0:6:3.01:41,3,0	0/0:35,0:27:5.93:0,6,93	0/0:26,0:19:12.01:0,12,227	1/1:15,0:15:2.99:24,3,0	0/0:17,0:18:27.56:0,28,1262	0/0:10,0:14:15.05:0,15,705	1/1:25,0:23:3.64:123,4,0	0/0:15,0:15:12.04:0,12,644	1/1:15,0:15:2.07:7,2,0	1/1:7,4:10:5.93:53,6,0	1/1:15,3:18:6.01:194,6,0	1/1:22,0:22:2.74:12,3,0	1/1:10,6:16:9.03:302,9,0	1/1:11,3:14:3.01:145,3,0	0/0:9,0:9:18.06:0,18,818	0/0:28,0:29:36.12:0,36,2059	1/1:18,8:25:5.09:362,5,0	0/0:17,0:18:21.05:0,21,732	0/0:9,0:8:3.01:0,3,199	0/0:31,0:31:19.39:0,19,141	./.	1/1:11,0:11:0.94:3,1,0	0/1:18,13:31:99:271,0,104	0/0:11,0:13:3.48:0,3,197	0/1:24,1:25:99:115,0,1385	0/0:16,0:16:21.05:0,21,988	0/0:4,0:3:3.01:0,3,246
chr10	6892176	.	A	AT	11173	PASS	AC=54;AF=1.000;AN=54;DP=345;FS=0.000;HRun=1;HaplotypeScore=60.8054;InbreedingCoeff=-0.0098;MQ=48.45;MQ0=5;QD=33.25;VQSLOD=4.2731;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,15:15:27.09:398,27,0	1/1:0,7:7:18.06:269,18,0	1/1:9,2:3:3:35,3,0	./.	1/1:0,13:13:35.95:476,36,0	1/1:1,10:10:12.04:179,12,0	1/1:2,6:6:15.05:224,15,0	1/1:1,11:12:36.12:537,36,0	1/1:1,11:12:27.02:377,27,0	1/1:1,13:12:36.12:538,36,0	1/1:1,8:8:18.06:269,18,0	1/1:2,14:15:39.10:556,39,0	1/1:0,10:10:24.08:359,24,0	1/1:0,14:13:36.12:539,36,0	1/1:1,14:14:36.12:538,36,0	1/1:1,11:11:27.09:393,27,0	1/1:0,18:18:48.16:713,48,0	1/1:1,16:15:33.11:494,33,0	1/1:1,10:11:30.10:448,30,0	1/1:1,9:10:27.09:398,27,0	1/1:0,17:17:42.14:622,42,0	1/1:0,10:9:20.99:287,21,0	1/1:0,9:9:21.03:289,21,0	1/1:1,8:8:17.98:241,18,0	1/1:0,17:17:44.90:567,45,0	1/1:0,8:8:24.04:334,24,0	1/1:1,25:26:63.15:915,63,0	1/1:0,5:5:12.04:179,12,0
chr10	6893921	.	T	TA	11393.92	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-10.437;DP=547;FS=10.597;HRun=6;HaplotypeScore=68.7401;InbreedingCoeff=0.9011;MQ=66.85;MQ0=3;MQRankSum=1.557;QD=25.15;ReadPosRankSum=-0.946;VQSLOD=3.8242;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,24:24:57.18:712,57,0	1/1:2,10:12:30.01:350,30,0	0/0:10,0:7:2.90:0,3,28	0/0:11,0:8:1.96:0,2,36	1/1:3,23:26:66.09:786,66,0	1/1:17,0:17:47.87:380,48,0	1/1:16,0:16:38.91:311,39,0	1/1:1,33:34:99:1165,99,0	1/1:18,0:18:32.92:263,33,0	1/1:2,40:42:99:1358,117,0	1/1:2,16:18:48.08:577,48,0	1/1:1,10:11:21.07:264,21,0	1/1:0,15:15:33.11:415,33,0	1/1:2,11:13:27.09:340,27,0	1/1:2,21:23:54.17:679,54,0	1/1:15,0:15:32.92:263,33,0	1/1:31,2:32:59.77:496,60,0	1/1:0,17:17:45.14:566,45,0	1/1:15,0:15:44.91:373,45,0	1/1:23,0:23:62.80:504,63,0	1/1:3,10:13:24.08:302,24,0	1/1:3,7:10:18.06:226,18,0	1/1:3,11:14:30.10:377,30,0	1/1:1,10:11:21.07:264,21,0	1/1:32,0:31:53.83:423,54,0	0/0:26,0:26:60.15:0,60,312	0/0:26,0:26:43.16:0,43,183	0/0:21,0:21:45.75:0,46,196
chr10	6893927	.	A	AAT	10447.46	PASS	AB=1.000;AC=49;AF=0.875;AN=56;BaseQRankSum=0.530;DP=529;FS=0.844;HRun=0;HaplotypeScore=78.7479;InbreedingCoeff=0.2344;MQ=65.15;MQ0=3;MQRankSum=-1.071;QD=20.13;ReadPosRankSum=6.702;VQSLOD=4.9071;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:24:48.95:193,49,0	1/1:11,0:12:4.52:81,5,0	0/1:9,0:6:4.57:5,0,37	0/0:10,0:7:7.57:0,8,69	1/1:22,0:22:57.78:244,58,0	1/1:0,17:17:48.16:935,48,0	1/1:0,14:15:39.13:762,39,0	1/1:34,0:34:58.30:387,58,0	1/1:0,17:19:33.11:644,33,0	1/1:40,0:40:77.14:413,77,0	0/1:18,0:18:2.03:102,0,2	1/1:10,0:10:18.17:72,18,0	0/1:17,0:17:13.86:79,0,14	1/1:11,0:11:23.65:97,24,0	1/1:22,0:22:27.01:167,27,0	1/1:0,14:14:33.11:645,33,0	1/1:5,29:32:62.17:1056,62,0	1/1:19,0:19:1.68:111,2,0	1/1:0,16:18:54.09:830,54,0	1/1:0,24:25:74.96:1224,75,0	1/1:10,0:10:20.77:82,21,0	0/1:8,0:8:5.02:43,0,5	1/1:11,0:11:25.96:103,26,0	0/1:11,0:11:1.82:51,0,2	1/1:0,29:29:54.19:1046,54,0	1/1:3,0:23:14.25:336,14,0	1/1:0,0:25:47.80:364,48,0	1/1:1,0:21:34.19:375,34,0
chr10	6897404	.	ATTG	A	14028.99	PASS	AB=1.000;AC=47;AF=0.839;AN=56;BaseQRankSum=9.432;DP=609;FS=2.173;HRun=0;HaplotypeScore=84.4385;InbreedingCoeff=0.8609;MQ=61.06;MQ0=0;MQRankSum=-0.922;QD=26.27;ReadPosRankSum=2.311;VQSLOD=4.9601;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,31:35:75.23:1094,75,0	1/1:0,15:15:39.13:567,39,0	0/1:20,0:16:10.09:10,0,460	0/0:6,0:5:15.02:0,15,248	1/1:5,22:27:59.90:759,60,0	1/1:5,28:33:51.17:751,51,0	1/1:6,14:20:33.11:477,33,0	1/1:12,23:37:73.38:940,73,0	1/1:2,9:11:24.08:353,24,0	1/1:7,18:25:54.18:782,54,0	1/1:2,25:27:65.72:864,66,0	1/1:3,18:21:39.06:546,39,0	1/1:8,14:22:30.10:441,30,0	1/1:2,21:23:36.12:530,36,0	1/1:4,27:31:51.17:751,51,0	1/1:2,21:23:48.16:705,48,0	1/1:4,17:21:36.12:530,36,0	1/1:3,27:30:57.19:833,57,0	1/1:1,16:17:43.91:546,44,0	1/1:2,23:25:60.06:817,60,0	1/1:5,5:10:9.03:132,9,0	1/1:2,10:12:27.02:363,27,0	1/1:3,12:15:23.87:353,24,0	1/1:1,17:18:33.11:486,33,0	1/1:4,12:16:27.09:397,27,0	0/0:26,0:26:63.19:0,63,1207	0/0:33,0:33:84.23:0,84,1611	0/0:10,0:10:30.07:0,30,579
chr10	6897872	.	CAA	C	5322.03	PASS	AB=0.687;AC=49;AF=0.875;AN=56;BaseQRankSum=-5.406;DP=537;FS=4.409;HRun=16;HaplotypeScore=77.7847;InbreedingCoeff=0.3603;MQ=51.73;MQ0=16;MQRankSum=-0.943;QD=10.14;ReadPosRankSum=1.906;VQSLOD=3.6671;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:19,4:46:14:14,0,180	1/1:0,4:4:8.99:75,9,0	0/0:6,0:2:2.74:0,3,12	0/0:6,0:4:6.68:0,7,44	1/1:0,15:18:32.30:249,32,0	1/1:0,11:10:23.97:201,24,0	1/1:9,7:26:43.10:285,43,0	1/1:10,12:22:23.34:184,23,0	1/1:8,3:13:16.67:119,17,0	1/1:14,12:27:33.72:271,34,0	1/1:9,10:18:23.51:188,24,0	0/1:10,4:14:19.10:19,0,20	1/1:5,9:14:29.65:237,30,0	1/1:7,11:19:6.14:280,6,0	1/1:7,8:17:28.88:209,29,0	1/1:8,17:24:18.88:281,19,0	1/1:7,24:31:54.23:471,54,0	1/1:4,6:11:23.78:183,24,0	1/1:8,8:18:16.40:187,16,0	1/1:7,14:24:37.24:270,37,0	1/1:6,6:13:17.67:137,18,0	1/1:12,8:22:20.06:190,20,0	1/1:12,11:25:25.29:190,25,0	1/1:7,7:14:25.74:182,26,0	0/1:7,8:15:12.55:174,0,13	1/1:9,17:25:27.37:280,27,0	1/1:10,18:27:38.42:325,38,0	1/1:6,6:8:14.89:119,15,0
chr10	6899565	.	CAAAAAACCCTGGAG	C	4156.19	PASS	AB=0.558;AC=5;AF=0.089;AN=56;BaseQRankSum=9.247;DP=494;FS=9.571;HRun=0;HaplotypeScore=189.0921;InbreedingCoeff=0.7482;MQ=77.89;MQ0=1;MQRankSum=-8.310;QD=79.93;ReadPosRankSum=1.652;VQSLOD=2.6225;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:63.19:0,63,3218	0/0:8,0:8:24.08:0,24,1549	0/0:34,0:30:51.53:0,52,2277	0/0:34,0:26:58.90:0,59,2474	0/0:17,0:17:45.15:0,45,2864	0/0:10,0:10:18.06:0,18,928	0/0:9,0:9:27.09:0,27,1486	0/0:30,0:31:72.65:0,73,3896	0/0:9,0:9:21.07:0,21,1025	0/0:16,0:16:48.13:0,48,2946	0/0:20,0:20:60.21:0,60,4010	0/0:10,0:10:24.08:0,24,1265	0/0:15,0:15:42.14:0,42,2296	0/0:11,0:11:33.11:0,33,2071	0/0:15,0:15:42.14:0,42,2531	0/0:6,0:6:18.06:0,18,1115	0/0:25,0:25:66.23:0,66,3936	0/0:25,0:24:63.22:0,63,3651	0/0:26,0:26:78.26:0,78,4368	0/0:23,0:23:60.19:0,60,3522	0/0:18,0:18:45.15:0,45,2584	0/0:14,0:14:33.11:0,33,1915	0/0:13,0:13:39.13:0,39,2440	0/0:5,0:5:9.03:0,9,508	0/0:24,0:24:72.24:0,72,4401	0/1:5,19:24:99:2008,0,500	1/1:4,16:20:36.12:1420,36,0	1/1:1,7:8:18.06:729,18,0
chr10	6899646	.	A	ATATC	3552.54	PASS	AB=0.885;AC=34;AF=0.680;AN=50;BaseQRankSum=1.545;DP=519;FS=3.547;HRun=0;HaplotypeScore=101.0115;InbreedingCoeff=0.6403;MQ=66.35;MQ0=7;MQRankSum=-0.794;QD=9.55;ReadPosRankSum=-2.423;VQSLOD=1.8554;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:18,0:26:0:0,0,0	1/1:8,0:8:6.02:97,6,0	./.	./.	1/1:22,3:25:9.03:206,9,0	1/1:17,3:20:6.02:137,6,0	0/0:14,0:14:3:0,3,25	./.	0/0:11,0:11:9.03:0,9,134	1/1:18,0:18:3.01:52,3,0	1/1:18,0:17:6.02:102,6,0	0/0:18,0:18:12.03:0,12,159	0/0:17,0:17:21.07:0,21,310	1/1:8,5:13:12.04:274,12,0	1/1:26,0:26:15.03:231,15,0	1/1:15,0:21:18.06:309,18,0	1/1:19,9:28:19.31:415,19,0	1/1:13,0:13:2.04:6,2,0	1/1:20,0:19:9.03:169,9,0	1/1:18,5:22:3.01:69,3,0	1/1:10,5:17:6.02:122,6,0	0/0:10,0:10:15.05:0,15,222	0/0:16,0:16:12.02:0,12,156	0/0:8,0:8:15.05:0,15,223	0/1:14,6:20:35.45:128,0,35	1/1:29,0:31:27.09:492,27,0	1/1:26,1:28:29.13:506,29,0	1/1:15,0:15:17.99:238,18,0
chr10	6900106	.	C	CAG	34414.12	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-5.242;DP=742;FS=14.799;HRun=0;HaplotypeScore=96.7957;InbreedingCoeff=0.9913;MQ=69.17;MQ0=2;MQRankSum=-7.880;QD=48.40;ReadPosRankSum=4.971;VQSLOD=4.8448;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,56:58:99:2865,154,0	1/1:0,11:11:30.10:562,30,0	0/0:14,0:14:42.14:0,42,600	0/0:17,0:17:44.98:0,45,618	1/1:0,27:27:69.24:1292,69,0	1/1:1,24:25:66.23:1236,66,0	1/1:1,28:29:72.25:1349,72,0	1/1:2,25:27:78.27:1431,78,0	1/1:2,26:28:75.26:1405,75,0	1/1:0,28:30:90.24:1583,90,0	1/1:2,11:14:33.11:618,33,0	1/1:1,32:33:81.28:1516,81,0	1/1:0,22:22:66.23:1235,66,0	1/1:1,27:28:72.25:1348,72,0	1/1:2,36:39:96.33:1798,96,0	1/1:1,27:27:72.25:1348,72,0	1/1:2,28:30:84.29:1573,84,0	1/1:1,16:17:36.12:674,36,0	1/1:1,14:15:45.15:811,45,0	1/1:2,21:23:60.21:1120,60,0	1/1:3,67:71:99:3428,184,0	1/1:1,26:28:66.23:1236,66,0	1/1:3,12:15:33.11:618,33,0	1/1:1,30:31:75.26:1405,75,0	1/1:2,24:26:69.24:1293,69,0	1/1:1,29:30:84.29:1546,84,0	1/1:1,17:18:45.15:842,45,0	1/1:0,6:6:15.05:281,15,0
chr10	6900938	.	C	CT	1966.84	PASS	AB=0.990;AC=17;AF=0.304;AN=56;BaseQRankSum=-0.415;DP=538;FS=0.000;HRun=10;HaplotypeScore=84.5972;InbreedingCoeff=0.6740;MQ=66.10;MQ0=10;MQRankSum=-6.118;QD=11.18;ReadPosRankSum=-0.925;VQSLOD=2.9604;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:25.97:0,26,246	0/1:10,0:10:11.97:12,0,62	0/1:30,1:11:14.43:14,0,38	0/0:34,1:16:0.04:0,0,93	0/0:32,1:32:46.09:0,46,552	1/1:11,2:13:26.04:232,26,0	1/1:13,4:17:32.97:316,33,0	0/0:26,0:26:56.80:0,57,466	1/1:7,3:10:23.42:182,23,0	0/0:21,0:21:46.91:0,47,389	0/0:20,0:20:32.82:0,33,261	0/0:18,0:18:23.42:0,23,181	0/0:11,0:11:11.94:0,12,93	0/0:12,0:12:13.79:0,14,102	0/0:11,0:10:8.98:0,9,74	0/1:14,0:14:2.23:119,0,2	1/1:19,8:24:37.94:403,38,0	0/0:23,0:24:37.74:0,38,295	1/1:10,12:23:12.47:364,12,0	1/1:13,3:15:0.69:174,1,0	0/0:9,0:9:11.98:0,12,99	0/0:8,0:7:11.99:0,12,98	0/0:19,0:19:32.73:0,33,257	0/0:12,0:12:17.97:0,18,146	1/1:4,11:15:32:341,32,0	0/0:26,0:27:63.01:0,63,489	0/0:17,0:17:14.77:0,15,117	0/0:16,0:16:32.95:0,33,270
chr10	6900948	.	TCA	T	316.16	PASS	AB=0.985;AC=13;AF=0.232;AN=56;BaseQRankSum=7.796;DP=538;FS=5.261;HRun=0;HaplotypeScore=88.6452;InbreedingCoeff=-0.0040;MQ=60.10;MQ0=25;MQRankSum=-5.382;QD=1.39;ReadPosRankSum=1.850;VQSLOD=0.7375;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:41,0:40:30.80:31,0,223	0/1:8,0:7:7.50:7,0,65	0/0:38,0:11:5.86:0,6,192	0/1:39,0:14:3.75:4,0,162	0/0:35,0:33:62.10:0,62,606	0/1:10,0:10:4.51:35,0,5	0/1:16,1:17:6.52:94,0,7	0/0:24,1:25:64.56:0,65,610	0/1:10,0:10:7.09:28,0,7	0/0:25,0:23:43.83:0,44,541	0/0:17,0:17:22.75:0,23,264	0/0:16,0:15:14.20:0,14,277	0/0:10,0:10:14.45:0,14,103	0/0:11,0:11:14.42:0,14,115	0/1:12,0:10:10.10:10,0,79	0/1:12,0:11:11.30:11,0,52	1/1:25,1:23:25.02:113,25,0	0/0:25,0:25:8.22:0,8,296	0/1:24,1:25:64.06:64,0,119	0/1:12,1:12:14.61:56,0,15	0/0:8,0:8:12.03:0,12,157	0/0:8,0:6:11.92:0,12,98	0/0:20,0:18:17.50:0,18,306	0/0:14,0:12:18:0,18,195	0/1:14,0:14:16.32:16,0,44	0/0:27,0:27:60.59:0,61,609	0/0:17,0:16:17.24:0,17,153	0/0:15,0:15:33.06:0,33,429
chr10	6900950	.	AT	A	5606.32	PASS	AB=0.609;AC=51;AF=0.911;AN=56;BaseQRankSum=-4.346;DP=533;FS=5.970;HRun=10;HaplotypeScore=65.1860;InbreedingCoeff=0.4729;MQ=57.78;MQ0=28;MQRankSum=2.699;QD=12.24;ReadPosRankSum=3.731;VQSLOD=4.4323;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,29:38:20.12:237,20,0	1/1:1,7:7:8.53:77,9,0	0/0:38,0:10:12.43:0,12,89	0/0:37,0:13:2.67:0,3,27	1/1:19,16:33:76.06:627,76,0	1/1:6,3:9:23.70:177,24,0	1/1:12,6:18:5.55:232,6,0	1/1:3,23:26:56.94:469,57,0	1/1:5,5:10:23.77:197,24,0	1/1:22,1:21:47.24:390,47,0	1/1:7,7:14:26.81:214,27,0	1/1:7,10:15:14.98:126,15,0	1/1:1,9:9:12:104,12,0	1/1:1,10:11:11.98:103,12,0	1/1:4,9:11:5.31:61,5,0	1/1:6,5:10:26.19:207,26,0	1/1:19,8:24:37:335,37,0	1/1:2,23:25:31.81:264,32,0	1/1:13,12:25:37.14:335,37,0	1/1:8,5:12:25.74:195,26,0	1/1:3,5:8:2.99:26,3,0	1/1:3,5:6:8.99:77,9,0	1/1:6,14:18:17.83:151,18,0	0/1:5,9:12:18.87:70,0,19	1/1:7,8:15:23.78:170,24,0	1/1:5,22:27:66.55:581,67,0	1/1:4,13:16:14.89:128,15,0	1/1:9,6:15:5.98:52,6,0
chr10	6901177	.	TGGTATGCA	T	8924.76	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=1.844;DP=364;FS=15.226;HRun=0;HaplotypeScore=96.8061;InbreedingCoeff=0.5878;MQ=71.59;MQ0=0;MQRankSum=-6.412;QD=27.38;ReadPosRankSum=4.440;VQSLOD=3.1180;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:16,15:31:27.09:677,27,0	1/1:0,1:1:3.01:76,3,0	0/0:21,0:20:24.08:0,24,606	0/0:17,0:16:27.04:0,27,865	1/1:4,10:13:24.08:586,24,0	1/1:1,6:7:18.06:453,18,0	1/1:11,12:23:24.04:555,24,0	1/1:13,3:16:9.01:176,9,0	1/1:3,4:7:12.04:306,12,0	1/1:4,3:7:9.03:196,9,0	1/1:3,6:9:12.04:267,12,0	1/1:2,12:14:21.07:535,21,0	1/1:4,9:13:15.05:382,15,0	1/1:1,8:9:15.05:381,15,0	1/1:4,9:13:18.06:457,18,0	1/1:3,6:9:15.05:381,15,0	1/1:11,5:16:12.04:304,12,0	1/1:7,3:10:9:172,9,0	1/1:14,4:17:12.04:306,12,0	1/1:4,2:6:6.02:153,6,0	1/1:15,10:25:3.01:76,3,0	1/1:4,7:11:21.07:531,21,0	1/1:2,8:10:21.06:535,21,0	1/1:11,6:17:6.02:153,6,0	1/1:6,4:10:9.03:152,9,0	1/1:6,11:17:33.08:735,33,0	1/1:4,6:10:12.04:306,12,0	1/1:1,2:2:3.01:76,3,0
chr10	6901529	.	AG	A	8330.03	PASS	AB=0.820;AC=8;AF=0.154;AN=52;BaseQRankSum=6.348;DP=4449;DS;FS=0.749;HRun=1;HaplotypeScore=1017.0944;InbreedingCoeff=-0.1820;MQ=36.91;MQ0=174;MQRankSum=2.242;QD=4.73;ReadPosRankSum=4.902;VQSLOD=1.3783;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:199,51:228:99:1237,0,3963	0/0:105,2:74:99:0,123,2365	./.	./.	0/0:245,3:187:99:0,122,3467	0/1:195,47:193:99:851,0,3931	0/0:132,7:119:41.90:0,42,3255	0/0:192,0:108:99:0,316,4793	0/1:144,40:161:99:705,0,4249	0/0:242,8:178:99:0,171,7077	0/0:241,5:182:99:0,217,4979	0/0:118,1:86:99:0,199,3095	0/0:107,4:95:90.73:0,91,2713	0/0:106,2:89:99:0,137,2939	0/0:115,1:97:99:0,144,2691	0/0:96,5:88:21.81:0,22,2739	0/1:194,56:224:99:1349,0,4704	0/0:152,0:127:99:0,337,5088	0/1:205,45:172:99:1207,0,5288	0/1:188,62:207:99:1607,0,4270	0/1:60,26:76:99:619,0,1675	0/0:96,0:75:99:0,135,2071	0/0:177,2:138:99:0,160,3457	0/0:85,2:79:94.24:0,94,2558	0/0:222,3:165:99:0,311,5543	0/0:158,0:114:99:0,316,4848	0/1:202,48:180:99:754,0,4794	0/0:45,0:40:93.14:0,93,1410
chr10	6903060	.	C	CTACA	9462.75	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=-13.000;DP=611;FS=0.000;HRun=0;HaplotypeScore=98.8881;InbreedingCoeff=0.9138;MQ=69.56;MQ0=0;MQRankSum=-3.310;QD=53.46;ReadPosRankSum=2.821;VQSLOD=5.8406;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:48:99:0,126,2336	0/0:6,0:6:12.04:0,12,224	0/0:13,0:13:28.34:0,28,490	0/1:19,0:19:7.43:7,0,553	0/0:29,0:29:69.19:0,69,1248	1/1:2,17:19:45.15:1199,45,0	1/1:6,18:24:54.18:1363,54,0	0/0:24,0:24:63.22:0,63,1172	1/1:1,19:23:54.19:1438,54,0	0/0:24,0:24:66.22:0,66,1186	0/0:20,0:20:57.12:0,57,935	0/0:22,0:21:51.16:0,51,920	0/0:20,0:20:54.19:0,54,1007	0/0:25,0:25:69.24:0,69,1287	0/0:23,0:23:66.23:0,66,1231	1/1:2,15:16:39.13:1038,39,0	1/1:2,25:27:66.23:1751,66,0	0/0:25,0:25:66.21:0,66,1200	1/1:3,8:11:30.09:677,30,0	1/1:4,12:16:30.10:793,30,0	0/0:31,0:31:83.98:0,84,1429	0/0:22,0:22:66.22:0,66,1198	0/0:23,0:23:60.21:0,60,1114	0/0:27,0:27:72.25:0,72,1335	1/1:2,17:20:45.15:1197,45,0	0/0:33,0:33:87.29:0,87,1588	0/0:15,0:15:42.14:0,42,783	0/0:3,0:3:9.03:0,9,168
chr10	6903199	.	CG	C	15144.82	PASS	AB=0.963;AC=53;AF=0.946;AN=56;BaseQRankSum=-1.097;DP=557;FS=0.000;HRun=2;HaplotypeScore=95.9079;InbreedingCoeff=0.4796;MQ=50.13;MQ0=11;MQRankSum=1.663;QD=28.31;ReadPosRankSum=2.611;VQSLOD=4.4947;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,26:30:71.74:833,72,0	1/1:0,8:8:21.07:270,21,0	0/1:25,1:9:28.56:29,0,38	0/0:22,0:4:6.01:0,6,72	1/1:0,20:20:47.80:500,48,0	1/1:3,10:13:39.09:458,39,0	1/1:2,9:9:24.02:288,24,0	1/1:3,16:17:45.12:532,45,0	1/1:5,17:22:54.14:656,54,0	1/1:0,23:23:66.14:784,66,0	1/1:2,14:16:42.12:527,42,0	1/1:1,18:18:39.12:497,39,0	1/1:5,20:23:63.17:772,63,0	1/1:5,15:20:60.10:697,60,0	1/1:1,24:24:60.15:755,60,0	1/1:5,15:19:48.12:570,48,0	1/1:6,6:12:29.87:292,30,0	1/1:2,28:30:69.16:856,69,0	1/1:2,15:15:45.10:558,45,0	1/1:6,18:23:54.13:662,54,0	1/1:1,14:15:33.05:406,33,0	1/1:6,14:20:48.10:545,48,0	1/1:5,21:25:63.14:765,63,0	1/1:5,15:19:42.11:500,42,0	1/1:2,15:17:45.09:543,45,0	1/1:5,20:25:69.20:837,69,0	1/1:8,21:28:81.22:976,81,0	1/1:1,1:1:3.01:38,3,0
chr10	6903214	.	CA	C	7769.51	PASS	AC=50;AF=0.926;AN=54;BaseQRankSum=-0.266;DP=571;FS=6.714;HRun=9;HaplotypeScore=127.0934;InbreedingCoeff=0.8566;MQ=55.54;MQ0=13;MQRankSum=-0.591;QD=15.99;ReadPosRankSum=6.175;VQSLOD=3.8597;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:11,20:30:41.47:453,41,0	1/1:9,1:10:25.21:137,25,0	0/0:44,0:17:26.47:0,26,307	0/0:39,1:14:19.59:0,20,195	1/1:17,1:18:25.65:151,26,0	1/1:2,9:11:30.02:273,30,0	1/1:6,8:12:15:137,15,0	1/1:14,3:15:28.73:175,29,0	1/1:4,14:18:33:301,33,0	1/1:23,1:23:55.95:356,56,0	1/1:15,1:16:27.15:173,27,0	1/1:6,10:15:30:273,30,0	1/1:6,15:19:48.01:433,48,0	1/1:3,15:18:45.02:410,45,0	1/1:19,1:20:41.94:237,42,0	1/1:4,15:18:28.72:295,29,0	1/1:3,11:14:1.43:267,1,0	1/1:30,0:30:47.09:262,47,0	1/1:7,15:20:44.98:401,45,0	1/1:7,17:23:51.02:466,51,0	1/1:14,0:14:26.23:130,26,0	1/1:3,13:16:8.59:249,9,0	1/1:4,22:25:44.95:410,45,0	1/1:3,14:16:30.01:273,30,0	1/1:0,17:17:45.02:411,45,0	1/1:7,17:24:53.95:480,54,0	1/1:6,23:28:68.90:618,69,0	./.
chr10	6904756	.	G	GAA	5761.56	PASS	AB=0.786;AC=51;AF=0.911;AN=56;BaseQRankSum=-3.203;DP=324;FS=8.052;HRun=11;HaplotypeScore=64.7186;InbreedingCoeff=0.5407;MQ=58.84;MQ0=16;MQRankSum=-4.112;QD=18.89;ReadPosRankSum=2.153;VQSLOD=3.4646;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,8:18:20.10:214,20,0	0/1:8,1:11:3.78:73,0,4	0/0:8,0:6:8.97:0,9,82	0/0:11,0:10:19.85:0,20,155	1/1:10,10:20:33.35:341,33,0	1/1:1,1:2:3.01:43,3,0	1/1:7,6:10:15.05:216,15,0	1/1:12,10:29:52.79:633,53,0	1/1:3,5:9:12.04:173,12,0	1/1:4,4:7:14.98:191,15,0	1/1:2,4:6:12.04:173,12,0	1/1:4,6:8:9.03:130,9,0	1/1:3,4:8:14.94:167,15,0	1/1:4,2:6:9.03:127,9,0	1/1:3,4:6:12.04:173,12,0	1/1:3,5:7:12.04:172,12,0	1/1:7,11:18:29.95:382,30,0	1/1:8,15:23:44.93:577,45,0	1/1:10,5:15:17.93:232,18,0	1/1:7,8:14:29.88:300,30,0	1/1:2,1:3:3.01:43,3,0	1/1:3,0:2:6.02:79,6,0	1/1:1,1:3:5.98:58,6,0	1/1:2,7:9:15.05:216,15,0	1/1:6,7:13:22.31:288,22,0	1/1:2,9:10:24:296,24,0	1/1:3,9:11:21.07:304,21,0	1/1:1,4:6:12.04:159,12,0
chr10	6904941	.	T	TACTTTACACTAATTCACATTTAC	63762.22	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-3.054;DP=541;FS=2.498;HRun=0;HaplotypeScore=227.3835;InbreedingCoeff=0.9059;MQ=77.73;MQ0=0;MQRankSum=-9.180;QD=127.78;ReadPosRankSum=3.764;VQSLOD=4.3821;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,4:23:27.08:1852,27,0	1/1:5,0:5:15.02:213,15,0	0/0:20,0:20:47.72:0,48,1442	0/0:22,0:20:45.15:0,45,1623	1/1:11,3:26:41.99:2485,42,0	1/1:12,3:20:39.13:3874,39,0	1/1:20,0:23:48.16:2859,48,0	1/1:53,0:53:99:7067,135,0	1/1:9,1:14:21.07:1235,21,0	1/1:10,2:28:66.17:3744,66,0	1/1:3,2:16:17.97:1124,18,0	1/1:11,2:18:33.11:2739,33,0	1/1:10,3:18:33.11:2504,33,0	1/1:9,4:17:33.11:2890,33,0	1/1:10,5:23:42.14:3490,42,0	1/1:13,5:26:45.15:3967,45,0	1/1:9,3:23:27.09:2361,27,0	1/1:8,0:8:21.07:1405,21,0	1/1:24,0:25:54.18:3187,54,0	1/1:15,0:15:36.12:2570,36,0	1/1:12,0:12:24:964,24,0	1/1:1,1:10:6.02:534,6,0	1/1:9,2:14:24.08:1707,24,0	1/1:5,1:16:15.05:1427,15,0	1/1:3,2:9:12.04:1000,12,0	1/1:5,3:14:42.14:2943,42,0	1/1:16,4:32:48.16:3723,48,0	1/1:3,5:11:18.06:1897,18,0
chr10	6905300	.	A	ACACTCGTGG	60465.95	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-8.403;DP=725;FS=1.326;HRun=0;HaplotypeScore=181.4225;InbreedingCoeff=0.9564;MQ=73.59;MQ0=0;MQRankSum=-10.258;QD=89.05;ReadPosRankSum=4.923;VQSLOD=5.2027;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,25:43:81.09:3397,81,0	1/1:0,5:8:15.05:726,15,0	0/0:27,0:27:66.23:0,66,1767	0/0:19,0:19:48.12:0,48,1135	1/1:5,12:20:14.33:724,14,0	1/1:3,15:21:54.07:2362,54,0	1/1:14,15:32:78.22:3304,78,0	1/1:15,19:36:99:4371,99,0	1/1:7,20:32:69.07:2960,69,0	1/1:7,19:30:81.21:3357,81,0	1/1:4,9:20:18.06:870,18,0	1/1:4,23:30:69.23:3164,69,0	1/1:11,18:30:81.17:3493,81,0	1/1:10,25:39:93.09:3827,93,0	1/1:16,17:35:81.13:3219,81,0	1/1:8,19:33:72.08:2994,72,0	1/1:5,21:34:72.25:3368,72,0	1/1:13,9:26:60.21:2785,60,0	1/1:9,6:18:48.11:1761,48,0	1/1:3,11:20:30.08:1447,30,0	1/1:14,9:29:30.10:1361,30,0	1/1:9,15:28:45.15:2113,45,0	1/1:5,6:17:17.99:631,18,0	1/1:8,11:21:20.87:1015,21,0	1/1:9,7:19:26.75:957,27,0	1/1:12,16:28:81.23:3340,81,0	1/1:5,17:22:51.13:2339,51,0	1/1:2,5:7:12.04:582,12,0
chr10	6905623	.	GCCCCCC	G	7104.67	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=1.405;DP=359;FS=5.077;HRun=15;HaplotypeScore=95.5300;InbreedingCoeff=0.7925;MQ=46.35;MQ0=0;MQRankSum=-2.746;QD=23.07;ReadPosRankSum=4.054;VQSLOD=2.4622;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:9,1:19:13.42:135,13,0	1/1:1,5:6:12.01:223,12,0	0/0:19,0:10:15.04:0,15,308	0/0:12,0:7:12.03:0,12,212	1/1:1,9:10:21.03:389,21,0	1/1:8,1:9:3.53:107,4,0	1/1:4,8:12:23.99:445,24,0	1/1:11,6:17:11.55:222,12,0	1/1:4,12:16:27.04:501,27,0	1/1:7,4:11:8.82:137,9,0	1/1:4,7:11:18.05:334,18,0	1/1:5,0:17:24.01:284,24,0	1/1:3,0:17:36.03:427,36,0	1/1:3,0:13:24.06:284,24,0	1/1:3,15:18:33.07:612,33,0	1/1:5,1:22:45.20:363,45,0	1/1:6,11:17:23.97:445,24,0	1/1:5,10:15:27:501,27,0	1/1:7,2:9:5.85:111,6,0	1/1:4,6:10:14.98:278,15,0	1/1:15,6:21:15.90:246,16,0	1/1:3,0:12:24.52:286,25,0	1/1:2,0:6:12:142,12,0	1/1:3,0:8:9.06:137,9,0	1/1:3,9:12:24.66:497,25,0	0/0:6,0:6:6.01:0,6,140	0/0:10,0:10:12.04:0,12,274	0/0:4,0:4:3.01:0,3,82
chr10	6905869	.	GTTTT	G	6915.20	PASS	AB=0.675;AC=41;AF=0.732;AN=56;BaseQRankSum=-1.139;DP=526;FS=41.273;HRun=16;HaplotypeScore=93.2963;InbreedingCoeff=0.5160;MQ=68.23;MQ0=2;MQRankSum=-2.414;QD=15.44;ReadPosRankSum=6.189;VQSLOD=0.4064;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,20:25:50.55:631,51,0	1/1:1,2:3:3:39,3,0	0/0:21,0:12:13.59:0,14,183	0/0:13,0:11:17.25:0,17,201	1/1:4,17:22:26.45:354,26,0	1/1:3,11:18:34.95:407,35,0	1/1:8,12:22:26.67:339,27,0	1/1:20,15:36:2.33:461,2,0	1/1:8,12:22:35.81:436,36,0	1/1:4,12:16:23.68:300,24,0	0/1:9,7:18:0.54:238,0,1	0/1:18,3:21:30.35:30,0,41	1/1:6,4:11:6.79:77,7,0	0/1:4,9:13:2.64:216,0,3	0/1:13,18:34:4.95:465,0,5	1/1:6,12:18:23.90:311,24,0	1/1:11,11:23:7.20:351,7,0	1/1:13,9:22:14.52:197,15,0	0/1:6,9:15:45.05:216,0,45	1/1:4,13:20:29.10:417,29,0	1/1:1,17:18:18.05:271,18,0	1/1:5,14:21:20.02:294,20,0	1/1:3,12:15:16.52:216,17,0	1/1:3,12:15:5.17:329,5,0	1/1:4,13:20:26.31:319,26,0	0/0:13,0:23:47.43:0,47,367	0/0:5,0:10:23.62:0,24,175	0/0:6,0:11:29.76:0,30,264
chr10	6905882	.	TTTTG	T	2390.88	PASS	AB=0.987;AC=26;AF=0.464;AN=56;BaseQRankSum=9.720;DP=484;FS=2.440;HRun=0;HaplotypeScore=100.3063;InbreedingCoeff=-0.4105;MQ=67.19;MQ0=2;MQRankSum=-2.751;QD=5.93;ReadPosRankSum=12.667;VQSLOD=-0.7160;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:28:81.29:209,0,81	0/1:3,0:3:8.64:9,0,18	0/0:19,0:10:20.51:0,21,209	0/0:16,0:13:28.31:0,28,198	0/1:24,0:24:99:134,0,108	0/1:19,0:19:44:152,0,44	0/1:16,0:16:31.93:116,0,32	0/1:25,0:25:85.29:180,0,85	0/1:19,2:21:61.68:189,0,62	0/1:15,0:15:58.65:74,0,59	0/1:13,0:13:26.09:81,0,26	0/1:13,1:14:15.13:15,0,76	0/1:7,0:7:18.73:23,0,19	0/1:14,0:14:60.12:71,0,60	1/1:24,1:25:15.12:239,15,0	0/1:18,1:19:98.61:129,0,99	1/1:16,2:18:14.19:161,14,0	0/1:11,0:11:17.38:66,0,17	0/1:15,0:15:48.50:49,0,88	0/1:21,0:21:64.63:137,0,65	0/1:21,0:21:53.08:89,0,53	0/1:23,0:23:99:105,0,109	1/1:13,0:13:14.75:81,15,0	0/1:19,1:20:98.56:152,0,99	0/1:18,0:18:4.33:100,0,4	0/0:19,0:19:29.89:0,30,233	0/0:16,0:16:36.19:0,36,313	0/0:11,0:11:17.97:0,18,195
chr10	6907545	.	C	CTTT	3542.41	PASS	AB=0.793;AC=47;AF=0.839;AN=56;BaseQRankSum=-0.706;DP=368;FS=6.782;HRun=17;HaplotypeScore=76.3260;InbreedingCoeff=0.0801;MQ=53.69;MQ0=12;MQRankSum=-1.503;QD=10.42;ReadPosRankSum=-1.445;VQSLOD=-0.2244;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:17,0:24:0.48:155,0,0	1/1:3,2:6:8.99:107,9,0	0/0:28,0:6:3.56:0,4,51	0/1:11,0:7:13.49:13,0,42	1/1:13,0:16:34.89:302,35,0	1/1:10,1:14:20.79:193,21,0	1/1:4,0:14:18.96:135,19,0	1/1:17,1:17:20.97:224,21,0	1/1:5,0:6:8.92:65,9,0	1/1:13,1:16:24.82:238,25,0	1/1:16,0:17:17.74:107,18,0	1/1:4,0:4:8.88:59,9,0	1/1:4,0:5:5.92:40,6,0	1/1:2,5:10:11.10:106,11,0	1/1:5,2:10:14.97:170,15,0	1/1:3,0:8:7.51:47,8,0	0/1:4,0:16:5.84:68,0,6	1/1:11,4:17:31.72:316,32,0	0/1:16,1:26:22.60:226,0,23	1/1:13,1:17:29.05:193,29,0	1/1:5,0:6:8.85:69,9,0	1/1:5,4:10:18.94:237,19,0	1/1:4,2:7:19.49:210,19,0	0/1:5,0:5:0:0,0,0	1/1:3,0:15:11.91:87,12,0	1/1:15,0:15:7.29:124,7,0	0/1:12,0:16:28.69:35,0,29	0/1:3,0:5:17.07:17,0,21
chr10	6908326	.	CTTGTTTGT	C	20926.06	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=5.399;DP=611;FS=5.716;HRun=0;HaplotypeScore=158.5116;InbreedingCoeff=0.8876;MQ=54.70;MQ0=3;MQRankSum=-6.043;QD=36.97;ReadPosRankSum=6.227;VQSLOD=4.0820;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:10,29:39:48.16:1208,48,0	1/1:3,5:8:15.05:352,15,0	0/0:24,0:15:27.09:0,27,1034	0/0:21,0:21:33.36:0,33,1346	1/1:6,13:19:36.08:832,36,0	1/1:6,28:34:50.23:1283,50,0	1/1:8,19:27:48.16:1211,48,0	1/1:12,10:22:30.02:555,30,0	1/1:9,17:25:27.09:703,27,0	1/1:4,19:23:57:1097,57,0	1/1:6,11:17:27.09:580,27,0	1/1:5,24:29:60.21:1523,60,0	1/1:4,21:25:51.17:1290,51,0	1/1:12,12:24:30.57:742,31,0	1/1:9,12:21:27.09:664,27,0	1/1:5,25:30:63.22:1601,63,0	1/1:13,24:37:33.11:789,33,0	1/1:8,7:15:15.05:390,15,0	1/1:7,9:16:27.06:543,27,0	1/1:9,16:25:51.05:1069,51,0	1/1:11,7:18:18.11:441,18,0	1/1:3,14:17:30.02:699,30,0	1/1:4,7:11:12.04:307,12,0	1/1:5,10:15:9.03:176,9,0	1/1:5,13:18:30.10:666,30,0	1/1:8,14:22:42.09:1034,42,0	1/1:7,17:24:39.13:1015,39,0	1/1:2,2:4:6.02:156,6,0
chr10	6908908	.	CCTGT	C	7871.97	PASS	AB=0.534;AC=15;AF=0.268;AN=56;BaseQRankSum=15.658;DP=681;FS=4.781;HRun=0;HaplotypeScore=113.7196;InbreedingCoeff=0.9118;MQ=74.88;MQ0=1;MQRankSum=-3.573;QD=39.96;ReadPosRankSum=2.328;VQSLOD=5.1764;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,99,2514	0/0:11,0:11:30.08:0,30,742	0/0:23,0:23:57.14:0,57,1280	0/0:18,0:18:36.12:0,36,851	0/0:29,0:29:81.26:0,81,2027	1/1:1,18:19:42.14:779,42,0	1/1:0,21:21:57.15:1017,57,0	0/0:38,0:38:99:0,105,2621	1/1:1,26:26:48.12:859,48,0	0/0:27,0:27:78.27:0,78,1997	0/0:19,0:19:54.17:0,54,1381	0/0:22,0:22:60.21:0,60,1561	0/0:30,0:30:81.28:0,81,2077	0/0:26,0:26:72.25:0,72,1877	0/0:32,0:32:93.32:0,93,2421	1/1:1,23:24:57.20:1055,57,0	0/1:4,27:31:14.02:1029,0,14	0/0:21,0:21:60.21:0,60,1593	1/1:9,22:31:66.18:1114,66,0	1/1:0,23:23:51.06:844,51,0	0/0:24,0:24:72.25:0,72,1852	0/0:18,0:18:51.18:0,51,1354	0/0:30,0:30:87.30:0,87,2319	0/0:17,0:17:39.13:0,39,1008	1/1:0,21:21:63.22:1175,63,0	0/0:29,0:29:87.29:0,87,2158	0/0:24,0:24:66.23:0,66,1756	0/0:10,0:10:21.07:0,21,560
chr10	6909031	.	TTTC	T	18628.41	PASS	AB=0.933;AC=47;AF=0.839;AN=56;BaseQRankSum=-11.316;DP=620;FS=2.549;HRun=0;HaplotypeScore=117.0396;InbreedingCoeff=0.8530;MQ=63.83;MQ0=1;MQRankSum=-3.940;QD=34.18;ReadPosRankSum=3.597;VQSLOD=5.7462;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,29:29:78.09:1169,78,0	1/1:0,9:9:24.08:390,24,0	0/0:15,0:14:10.63:0,11,420	0/0:25,0:22:43.95:0,44,755	1/1:1,24:25:62.61:938,63,0	1/1:0,19:19:54.18:878,54,0	1/1:2,22:24:54.18:877,54,0	1/1:4,20:24:50.97:616,51,0	1/1:0,18:18:36.12:584,36,0	1/1:1,25:26:75.18:1141,75,0	1/1:0,19:19:51.09:771,51,0	1/1:1,16:17:45.15:732,45,0	1/1:2,17:19:32.80:500,33,0	1/1:1,24:25:54.18:867,54,0	1/1:1,21:22:45.15:734,45,0	1/1:0,29:29:69.24:1124,69,0	1/1:9,20:29:81.04:1200,81,0	1/1:0,21:21:48.16:782,48,0	1/1:5,23:28:69.18:1006,69,0	1/1:1,22:23:63.04:850,63,0	1/1:0,19:19:36.12:587,36,0	1/1:0,17:17:51.09:763,51,0	1/1:0,22:22:60.08:886,60,0	1/1:2,24:26:45.15:733,45,0	1/1:1,12:13:30.02:430,30,0	0/1:39,3:42:70.63:71,0,2239	0/0:27,0:26:51.04:0,51,984	0/0:7,0:7:18.02:0,18,349
chr10	6909047	.	ACTGTT	A	3203.12	PASS	AB=0.519;AC=5;AF=0.089;AN=56;BaseQRankSum=-7.464;DP=673;FS=1.586;HRun=0;HaplotypeScore=206.0051;InbreedingCoeff=0.7715;MQ=62.01;MQ0=4;MQRankSum=-0.363;QD=42.15;ReadPosRankSum=2.362;VQSLOD=3.4913;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:78.03:0,78,2029	0/0:11,0:11:30.03:0,30,700	0/0:25,0:18:47.97:0,48,989	0/0:33,0:28:68.91:0,69,1320	0/0:26,0:26:73:0,73,2019	0/0:19,0:19:53.91:0,54,1389	0/0:23,0:23:53.90:0,54,890	0/0:31,0:31:89.75:0,90,1949	0/0:21,0:21:42.08:0,42,1250	0/0:26,0:26:75.08:0,75,1963	0/0:20,0:20:56.90:0,57,1370	0/0:19,0:19:48.10:0,48,1454	0/0:19,0:19:25.04:0,25,1219	0/0:28,0:28:65.96:0,66,1708	0/0:24,0:24:63.15:0,63,1676	0/0:28,0:28:69.06:0,69,1765	0/0:27,0:27:60.91:0,61,1844	0/0:26,0:26:63.16:0,63,1775	0/0:29,0:29:86.54:0,87,1592	0/0:23,0:23:66.16:0,66,1999	0/0:20,0:20:54.02:0,54,1460	0/0:22,0:22:66.09:0,66,1802	0/0:27,0:27:71.50:0,72,2041	0/0:26,0:26:60.03:0,60,1426	0/0:12,0:12:33.03:0,33,878	0/1:3,38:41:99:1875,0,175	1/1:1,28:29:56.82:1206,57,0	1/1:0,6:6:14.98:249,15,0
chr10	6910011	.	C	CAAA	7971.52	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=0.285;DP=469;FS=1.022;HRun=10;HaplotypeScore=152.4763;InbreedingCoeff=0.7394;MQ=72.34;MQ0=0;MQRankSum=-5.725;QD=18.33;ReadPosRankSum=-0.332;VQSLOD=1.8396;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:29:58.57:695,59,0	1/1:7,0:7:6.02:85,6,0	0/0:14,0:13:16.06:0,16,139	0/0:20,0:19:23.17:0,23,283	1/1:20,0:20:35.80:376,36,0	1/1:4,13:19:27.07:484,27,0	1/1:8,11:21:27.05:432,27,0	1/1:25,0:25:15.90:178,16,0	1/1:8,14:23:27.05:447,27,0	1/1:21,0:20:27.04:304,27,0	1/1:13,0:13:21.05:248,21,0	1/1:16,0:16:30:327,30,0	1/1:14,0:14:21.06:247,21,0	1/1:23,0:21:33.08:425,33,0	1/1:18,0:17:27.03:328,27,0	1/1:4,19:24:37.33:657,37,0	1/1:6,22:33:29.62:472,30,0	1/1:13,0:13:15.01:158,15,0	1/1:3,11:18:45.04:577,45,0	1/1:4,10:17:32.85:331,33,0	1/1:13,0:13:6.90:73,7,0	1/1:7,0:7:6.01:68,6,0	1/1:6,0:6:6.02:84,6,0	1/1:14,0:13:20.88:190,21,0	1/1:5,12:20:28.56:415,29,0	1/1:8,0:8:15.03:179,15,0	1/1:9,0:9:13.84:166,14,0	1/1:4,0:4:4.53:24,5,0
chr10	6910198	.	ACCCAGCAT	A	1357.58	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=5.477;DP=467;FS=2.048;HRun=0;HaplotypeScore=132.0556;InbreedingCoeff=0.8828;MQ=89.49;MQ0=4;MQRankSum=-6.137;QD=67.88;ReadPosRankSum=0.985;VQSLOD=3.6276;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:29:81.28:0,81,3410	0/0:3,0:3:6.02:0,6,268	0/0:23,0:24:53.41:0,53,2344	0/0:16,0:16:42.14:0,42,1502	0/0:29,0:29:81.28:0,81,3524	0/0:23,0:23:63.21:0,63,2640	0/0:14,0:14:42.14:0,42,1851	0/0:23,0:22:66.22:0,66,2680	0/0:12,0:12:36.12:0,36,1609	0/0:12,0:12:36.12:0,36,1522	0/0:14,0:13:39.13:0,39,1721	0/0:14,0:14:30.09:0,30,1339	0/0:10,0:10:27.05:0,27,1050	0/0:23,0:23:69.24:0,69,3007	0/0:24,0:24:60.21:0,60,2491	0/0:12,0:12:36.12:0,36,1609	0/0:31,0:31:81.28:0,81,3585	0/0:26,0:26:78.27:0,78,3303	0/0:29,0:29:78.27:0,78,3136	0/0:10,0:10:30.10:0,30,1340	0/0:26,0:26:75.26:0,75,3154	0/0:3,0:3:6:0,6,268	0/0:7,0:7:21.07:0,21,923	0/0:14,0:14:42.14:0,42,1785	0/0:14,0:14:42.14:0,42,1866	1/1:2,10:12:33.11:887,33,0	1/1:0,6:6:15.05:430,15,0	1/1:0,2:2:6.02:172,6,0
chr10	6910241	.	C	CGT	922.25	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=5.268;DP=483;FS=1.597;HRun=0;HaplotypeScore=106.8008;InbreedingCoeff=0.8760;MQ=63.66;MQ0=6;MQRankSum=-5.071;QD=15.12;ReadPosRankSum=-0.331;VQSLOD=3.4374;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:28,1:24:24.56:205,25,0	0/0:7,0:7:18.05:0,18,213	0/0:32,0:21:38.80:0,39,384	0/0:42,0:28:53.46:0,53,578	0/0:25,0:25:48.14:0,48,587	0/0:23,0:23:36.10:0,36,428	0/0:11,0:11:27.08:0,27,321	0/0:22,0:22:54.17:0,54,657	0/0:11,0:12:31.34:0,31,370	0/0:16,0:15:37.35:0,37,425	0/0:10,0:10:21.06:0,21,255	0/0:14,0:14:15.52:0,16,185	0/0:7,0:7:15.05:0,15,183	0/0:19,0:20:41.62:0,42,484	0/0:20,0:21:38.86:0,39,453	0/0:15,0:15:33.10:0,33,403	0/0:39,0:40:53.28:0,53,636	0/0:28,0:28:45.17:0,45,735	0/0:17,0:17:33.03:0,33,383	0/0:11,0:11:21.07:0,21,257	0/0:20,0:20:48.15:0,48,585	0/0:1,0:1:3.01:0,3,36	0/0:6,0:6:18.06:0,18,219	0/0:6,0:6:12:0,12,131	0/0:14,0:14:36.58:0,37,433	1/1:14,3:17:8.48:555,8,0	1/1:12,0:12:14.55:210,15,0	1/1:2,1:3:6.02:98,6,0
chr10	6910254	.	G	GTGTGCT	1657.33	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=4.914;DP=451;FS=3.084;HRun=0;HaplotypeScore=124.6850;InbreedingCoeff=0.2646;MQ=54.29;MQ0=12;MQRankSum=-6.368;QD=9.75;ReadPosRankSum=-3.364;VQSLOD=1.7724;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:21:41.26:139,0,41	0/0:7,0:7:18.06:0,18,303	0/0:33,0:17:42.89:0,43,441	0/0:43,0:24:53.93:0,54,596	0/0:23,0:23:31.27:0,31,741	0/1:21,0:21:1.98:2,0,452	0/0:9,0:9:27.09:0,27,434	0/0:24,0:20:54.17:0,54,678	0/0:12,0:12:31.34:0,31,461	0/0:15,0:13:39.12:0,39,643	0/0:9,0:8:21.07:0,21,317	0/1:14,0:14:41.22:41,0,192	0/0:5,0:5:15.05:0,15,270	0/0:15,0:15:41.62:0,42,641	0/0:20,0:19:38.86:0,39,543	0/1:14,0:14:16.19:16,0,484	0/1:37,0:37:13.65:14,0,777	0/0:25,0:26:29.72:0,30,1013	0/1:12,0:12:6.47:6,0,375	0/0:10,0:10:4.19:0,4,296	0/0:17,0:17:48.15:0,48,673	0/0:1,0:1:3.01:0,3,41	0/0:6,0:6:18.06:0,18,280	0/0:5,0:5:12:0,12,131	0/1:14,0:14:10.64:11,0,562	1/1:8,8:18:17.59:1119,18,0	1/1:4,7:12:18.06:364,18,0	1/1:2,0:2:6.02:104,6,0
chr10	6910256	.	GCT	G	675.43	PASS	AB=0.931;AC=14;AF=0.250;AN=56;BaseQRankSum=4.415;DP=451;FS=3.750;HRun=0;HaplotypeScore=97.7957;InbreedingCoeff=-0.0444;MQ=52.57;MQ0=20;MQRankSum=2.689;QD=4.63;ReadPosRankSum=10.973;VQSLOD=0.6475;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:6,19:20:28.52:432,0,29	0/0:7,0:7:4.39:0,4,133	0/0:33,0:16:46.59:0,47,438	0/0:48,0:24:53.95:0,54,625	0/0:22,0:22:26.87:0,27,460	0/0:21,0:21:15.24:0,15,390	0/1:9,0:9:1.97:2,0,195	0/0:22,0:18:32.68:0,33,570	0/0:12,0:12:15.07:0,15,331	0/1:16,0:14:45.20:45,0,166	0/0:9,0:8:10.04:0,10,178	0/0:14,0:14:11.84:0,12,171	0/1:5,0:5:6.91:7,0,64	0/1:15,0:15:16.14:16,0,236	0/0:20,0:19:25.49:0,25,452	0/0:14,0:14:12.55:0,13,339	0/0:36,0:36:6.39:0,6,462	0/1:26,0:26:15.74:16,0,414	0/1:12,0:12:9.86:10,0,149	0/0:10,0:10:8.64:0,9,223	0/0:17,0:17:28.24:0,28,473	1/1:1,0:1:2.50:9,2,0	0/1:6,0:6:11.21:11,0,94	0/0:4,0:4:12:0,12,131	0/0:14,0:14:27.25:0,27,444	0/1:16,2:18:99:163,0,223	0/1:9,2:11:70.76:71,0,96	1/1:1,1:2:5.84:41,6,0
chr10	6910281	.	C	CTTTATTT	1742.33	PASS	AB=0.785;AC=23;AF=0.426;AN=54;BaseQRankSum=3.422;DP=381;FS=0.517;HRun=0;HaplotypeScore=104.3150;InbreedingCoeff=-0.4547;MQ=44.33;MQ0=46;MQRankSum=-3.474;QD=6.48;ReadPosRankSum=-1.362;VQSLOD=1.9958;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:17,0:19:99:236,0,456	0/1:3,0:7:0.57:1,0,50	0/0:27,0:4:8.76:0,9,125	0/0:43,0:5:6.86:0,7,82	0/1:7,0:17:8.43:8,0,191	0/1:6,0:17:60.75:75,0,61	0/1:5,0:5:9.15:59,0,9	0/1:24,0:19:99:104,0,762	0/1:6,0:7:31.35:31,0,69	0/1:15,0:13:65.41:157,0,65	0/0:5,0:5:1.52:0,2,53	0/1:1,2:10:18.62:112,0,19	0/1:3,0:3:32.95:37,0,33	0/1:8,0:8:66.69:117,0,67	0/1:4,0:12:1.54:2,0,73	0/1:5,0:8:72.23:72,0,89	0/1:15,0:39:99:196,0,386	0/1:20,0:22:99:130,0,298	0/1:11,0:22:99:250,0,285	0/1:2,0:6:16.43:38,0,16	0/1:6,0:6:12.97:13,0,74	1/1:1,0:1:3.01:46,3,0	1/1:4,0:4:9:114,9,0	./.	0/1:7,0:12:94.85:95,0,196	0/0:22,0:22:62.87:0,63,695	0/0:9,0:9:15.03:0,15,201	0/0:5,0:3:9.02:0,9,123
chr10	6910285	.	C	CTTTATTTA	7160.44	PASS	AC=46;AF=1.000;AN=46;DP=367;FS=0.000;HRun=0;HaplotypeScore=99.5492;InbreedingCoeff=0.0971;MQ=42.99;MQ0=45;QD=24.11;VQSLOD=3.4790;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:18:24.06:629,24,0	1/1:7,0:7:6.02:150,6,0	./.	./.	1/1:14,0:14:19.88:415,20,0	1/1:14,0:14:18.06:467,18,0	1/1:4,0:4:2.04:6,2,0	1/1:25,0:20:12.47:259,12,0	1/1:6,0:6:9.03:267,9,0	1/1:10,5:14:20.43:504,20,0	1/1:4,0:4:6.02:142,6,0	1/1:8,0:8:6.02:214,6,0	1/1:5,0:5:3.01:72,3,0	1/1:8,0:8:4.57:79,5,0	1/1:11,0:10:6.02:151,6,0	1/1:8,0:8:12.04:318,12,0	1/1:40,1:41:34.36:776,34,0	1/1:23,0:23:30.10:787,30,0	1/1:23,0:22:31.35:819,31,0	1/1:6,0:6:6.02:163,6,0	1/1:6,0:6:10.28:230,10,0	./.	./.	./.	1/1:12,0:12:10.85:265,11,0	1/1:21,0:22:37.79:316,38,0	1/1:8,0:9:11.93:126,12,0	1/1:5,0:3:2.04:6,2,0
chr10	6911830	.	A	AT	7777.07	PASS	AB=0.591;AC=49;AF=0.875;AN=56;BaseQRankSum=-1.062;DP=533;FS=0.751;HRun=11;HaplotypeScore=67.3329;InbreedingCoeff=0.4067;MQ=63.81;MQ0=0;MQRankSum=-1.813;QD=14.96;ReadPosRankSum=1.115;VQSLOD=5.4289;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,26:33:45.73:631,46,0	1/1:2,3:6:11.86:106,12,0	0/0:7,0:7:10.06:0,10,64	0/0:6,0:6:6.47:0,6,41	0/1:7,22:33:23.11:450,0,23	1/1:2,1:20:39.94:216,40,0	1/1:0,2:14:34.41:197,34,0	1/1:7,21:28:16.65:532,17,0	1/1:1,0:10:19.89:100,20,0	1/1:10,18:28:10.64:471,11,0	1/1:5,14:19:39.08:396,39,0	1/1:5,11:16:12.82:305,13,0	1/1:3,14:17:6.81:251,7,0	1/1:3,11:15:23.88:228,24,0	1/1:6,18:24:27.86:464,28,0	1/1:2,1:16:37.35:213,37,0	1/1:5,2:32:45.54:340,46,0	1/1:6,22:28:16.66:532,17,0	1/1:8,2:32:65.95:376,66,0	1/1:1,1:20:48.55:254,49,0	1/1:1,9:10:24.05:244,24,0	0/1:2,3:5:31.45:76,0,31	0/1:3,6:11:19.75:154,0,20	1/1:4,17:21:18.85:373,19,0	1/1:2,2:22:54.27:293,54,0	1/1:8,0:26:54.71:304,55,0	1/1:3,0:20:31.25:158,31,0	1/1:3,2:14:22.73:115,23,0
chr10	6912517	.	TTG	T	2313.82	PASS	AB=1.000;AC=33;AF=0.589;AN=56;BaseQRankSum=-5.456;DP=505;FS=23.148;HRun=0;HaplotypeScore=95.0700;InbreedingCoeff=0.4003;MQ=45.90;MQ0=25;MQRankSum=-2.030;QD=7.64;ReadPosRankSum=0.502;VQSLOD=1.6675;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:16:2.37:51,2,0	0/1:8,0:8:3.81:18,0,4	0/0:73,0:18:7.02:0,7,75	0/0:73,0:12:9.50:0,9,47	0/1:22,0:22:14.64:15,0,118	1/1:6,0:5:13.46:71,13,0	1/1:9,0:8:17.87:102,18,0	0/0:17,0:14:8.34:0,8,83	1/1:13,0:13:17.44:98,17,0	0/0:8,0:7:13.15:0,13,63	0/0:10,0:10:7.11:0,7,85	1/1:10,0:8:4.65:31,5,0	0/0:4,0:3:3.85:0,4,22	0/1:10,0:10:26.80:40,0,27	0/1:26,0:24:47.48:47,0,92	1/1:11,0:11:29.33:230,29,0	1/1:26,1:27:39.14:228,39,0	0/1:19,0:18:12.88:13,0,71	1/1:20,0:17:38.07:222,38,0	1/1:11,0:9:19.34:134,19,0	0/1:6,0:5:0.15:30,0,0	0/0:7,0:7:5.50:0,6,39	0/0:9,0:8:1.31:0,1,20	0/1:10,0:10:2.58:3,0,7	1/1:16,0:14:27.97:182,28,0	1/1:29,2:31:52.29:453,52,0	1/1:18,1:19:49.45:379,49,0	1/1:10,3:13:16.10:147,16,0
chr10	6912518	.	TG	T	2646.80	PASS	AB=0.946;AC=29;AF=0.518;AN=56;BaseQRankSum=-6.461;DP=498;FS=19.558;HRun=1;HaplotypeScore=90.2812;InbreedingCoeff=0.5438;MQ=45.86;MQ0=25;MQRankSum=0.411;QD=11.66;ReadPosRankSum=-0.530;VQSLOD=0.6256;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,2:16:15.91:98,16,0	0/0:8,0:8:4.83:0,5,38	0/0:71,3:18:2.49:0,2,71	0/0:69,5:12:2.78:0,3,41	0/0:20,2:22:21.64:0,22,183	1/1:6,0:5:14.57:121,15,0	1/1:8,0:8:18.61:103,19,0	0/0:16,0:13:5.41:0,5,76	1/1:9,3:12:15.77:97,16,0	0/0:5,2:6:1.80:0,2,29	0/0:10,0:10:23.78:0,24,124	0/1:9,0:8:5.44:13,0,5	0/0:4,0:3:5.81:0,6,35	0/1:11,0:11:40.17:40,0,40	0/0:25,1:24:11.38:0,11,119	1/1:7,4:11:31.98:240,32,0	1/1:18,6:25:39.86:254,40,0	0/0:19,0:18:7.94:0,8,108	1/1:16,2:15:40.09:281,40,0	1/1:9,1:9:20.80:152,21,0	0/1:5,1:5:8.76:28,0,9	0/1:6,1:7:8.30:8,0,44	0/0:10,0:9:6.57:0,7,35	0/1:11,0:11:0.14:11,0,0	1/1:12,3:13:29.35:205,29,0	1/1:23,7:30:78.97:568,79,0	1/1:18,1:19:51.07:393,51,0	1/1:12,1:13:34.85:223,35,0
chr10	6912522	.	TTG	T	930.05	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=-3.233;DP=501;FS=51.840;HRun=0;HaplotypeScore=100.4665;InbreedingCoeff=0.5354;MQ=49.20;MQ0=24;MQRankSum=-0.561;QD=4.82;ReadPosRankSum=-2.914;VQSLOD=-0.3987;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:16:4.82:57,5,0	0/0:8,0:8:17.91:0,18,179	0/0:80,0:20:24.45:0,24,237	0/0:84,0:15:22.69:0,23,158	0/0:22,0:22:52.29:0,52,623	1/1:6,0:5:9.60:53,10,0	1/1:8,0:7:10.92:66,11,0	0/0:17,0:14:31.72:0,32,360	1/1:12,0:12:14.65:88,15,0	0/0:6,0:5:11.99:0,12,143	0/0:11,0:11:33.07:0,33,393	0/0:8,0:7:7.82:0,8,53	0/0:5,0:4:11.94:0,12,137	0/1:12,0:11:27.31:27,0,173	0/0:26,0:24:41.71:0,42,616	1/1:6,4:10:23.63:199,24,0	1/1:23,1:24:35.02:204,35,0	0/0:18,0:17:26:0,26,353	1/1:14,1:12:15.93:97,16,0	1/1:8,1:7:7.17:47,7,0	0/0:6,0:5:1.17:0,1,74	0/0:7,0:7:13.98:0,14,129	0/0:9,0:8:15.80:0,16,116	0/1:10,0:10:3.02:3,0,87	1/1:12,1:12:6.83:123,7,0	0/1:28,0:28:66.88:67,0,317	0/1:17,0:17:71.63:72,0,126	0/1:13,0:13:23.07:23,0,181
chr10	6912529	.	G	GT	2069.17	PASS	AB=1.000;AC=43;AF=0.768;AN=56;BaseQRankSum=-2.733;DP=490;FS=3.182;HRun=9;HaplotypeScore=92.8831;InbreedingCoeff=0.6464;MQ=55.30;MQ0=24;MQRankSum=-2.383;QD=7.87;ReadPosRankSum=0.092;VQSLOD=1.9445;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:14:4.70:16,5,0	1/1:5,3:7:9.91:97,10,0	0/0:86,0:23:30.39:0,30,217	0/0:84,0:17:24.75:0,25,170	1/1:14,6:21:26.09:215,26,0	0/1:4,0:3:0:0,0,0	1/1:8,0:6:2.50:9,2,0	1/1:16,4:17:22.39:199,22,0	1/1:10,0:9:3.46:24,3,0	1/1:3,5:6:15.01:151,15,0	1/1:4,8:12:30.04:315,30,0	0/1:8,0:7:0.26:16,0,0	1/1:6,1:6:8.97:82,9,0	1/1:14,1:14:18.96:127,19,0	1/1:8,15:21:48.11:511,48,0	1/1:11,0:11:1.83:5,2,0	0/1:21,0:21:0.34:0,0,1	1/1:7,10:16:17.96:171,18,0	1/1:10,0:7:5.43:16,5,0	1/1:5,0:3:0.47:1,0,0	1/1:6,1:6:4.17:21,4,0	1/1:7,0:7:14.70:104,15,0	1/1:10,0:9:8.95:68,9,0	1/1:8,0:8:8.93:83,9,0	1/1:8,0:8:0.47:1,0,0	0/0:25,0:25:34.05:0,34,242	0/0:19,0:19:32.33:0,32,239	0/0:12,0:12:11.23:0,11,138
chr10	6912538	.	TGAGGGGGG	T	790.14	PASS	AB=0.627;AC=14;AF=0.259;AN=54;BaseQRankSum=1.048;DP=408;FS=5.018;HRun=0;HaplotypeScore=104.8962;InbreedingCoeff=0.6352;MQ=61.88;MQ0=22;MQRankSum=-1.420;QD=18.81;ReadPosRankSum=-1.203;VQSLOD=2.4503;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,7:8:7.27:169,7,0	0/0:6,0:5:12.03:0,12,306	0/0:90,0:29:60.20:0,60,1555	0/0:80,0:16:35.91:0,36,801	0/0:13,0:14:33.11:0,33,969	0/1:1,1:1:0:0,0,0	./.	0/0:18,0:14:42.14:0,42,1173	1/1:2,5:6:3:28,3,0	0/0:11,0:9:8.66:0,9,652	0/0:12,0:13:33.10:0,33,980	0/0:3,0:7:9.03:0,9,235	0/0:4,0:5:9.03:0,9,278	0/0:9,0:11:30.10:0,30,944	0/0:18,0:19:47.86:0,48,1422	1/1:0,1:1:3.01:88,3,0	1/1:1,5:6:6.02:170,6,0	0/0:15,0:14:24.07:0,24,707	0/1:3,7:8:99:226,0,211	1/1:0,4:2:3.01:87,3,0	0/0:8,0:7:8.37:0,8,339	0/0:1,0:7:15.05:0,15,402	0/0:1,0:7:12.04:0,12,346	0/0:2,0:6:8.84:0,9,217	1/1:1,3:4:6.02:172,6,0	0/0:16,0:16:45.14:0,45,1474	0/0:17,0:16:45.15:0,45,1427	0/0:9,0:10:24.08:0,24,864
chr10	6912540	.	A	AG	1697.99	PASS	AB=1.000;AC=29;AF=0.580;AN=50;BaseQRankSum=-4.044;DP=410;FS=5.366;HRun=8;HaplotypeScore=74.8018;InbreedingCoeff=0.2794;MQ=61.94;MQ0=22;MQRankSum=0.442;QD=5.94;ReadPosRankSum=4.214;VQSLOD=0.3509;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:7:4.44:0,4,14	1/1:8,0:7:3.85:11,4,0	0/1:87,0:28:7.63:8,0,198	0/0:77,0:16:15.64:0,16,121	0/1:14,0:14:16.90:36,0,17	./.	./.	0/1:22,0:16:35.12:78,0,35	./.	0/1:10,0:9:29.89:37,0,30	1/1:13,0:13:25.06:126,25,0	0/1:7,0:7:5.98:39,0,6	1/1:6,0:5:8.53:50,9,0	1/1:13,0:11:22.88:139,23,0	1/1:19,0:19:33.38:180,33,0	0/0:1,0:1:2.22:0,2,7	0/0:6,0:6:4.44:0,4,14	0/1:15,0:14:0.57:39,0,1	0/0:12,0:9:8.99:0,9,45	0/0:4,0:2:2.22:0,2,7	1/1:8,0:7:4.50:24,4,0	1/1:7,0:7:11.85:80,12,0	0/1:8,0:8:3.33:53,0,3	1/1:6,0:6:5.93:44,6,0	0/0:4,0:4:4.44:0,4,14	1/1:6,11:17:24.62:340,25,0	1/1:7,10:16:32.75:344,33,0	1/1:2,7:9:7.39:225,7,0
chr10	6913378	.	A	AC	1133.40	PASS	AB=0.967;AC=21;AF=0.389;AN=54;BaseQRankSum=2.019;DP=588;FS=3.070;HRun=1;HaplotypeScore=126.2644;InbreedingCoeff=0.1096;MQ=30.18;MQ0=73;MQRankSum=1.010;QD=3.44;ReadPosRankSum=1.842;VQSLOD=0.4879;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:30:16.88:0,17,198	1/1:4,0:3:3.01:40,3,0	0/0:26,0:2:6.02:0,6,76	0/0:49,0:11:27.09:0,27,342	1/1:12,0:10:6.02:80,6,0	0/0:21,0:17:18.72:0,19,205	0/0:36,0:26:22.62:0,23,201	0/1:14,0:12:99:108,0,236	0/0:16,0:15:13.60:0,14,131	0/1:21,0:15:8.25:8,0,281	1/1:10,1:10:4.83:44,5,0	0/1:25,2:22:1.36:301,0,1	0/1:13,0:10:21.07:21,0,35	0/1:24,2:21:52.67:120,0,53	1/1:12,4:13:11.95:147,12,0	0/1:20,1:16:27.69:28,0,108	0/0:19,0:18:19.86:0,20,183	0/1:18,1:14:99:137,0,159	0/0:15,0:13:28.88:0,29,355	0/1:9,0:8:3.25:3,0,32	0/1:69,3:46:31.13:31,0,65	0/1:20,0:16:13.10:13,0,101	0/1:13,0:7:32.23:34,0,32	1/1:27,1:21:14.63:189,15,0	0/0:20,0:17:27.29:0,27,265	0/0:10,0:7:21.06:0,21,254	0/0:11,0:10:12.24:0,12,127	./.
chr10	6913379	.	CA	C	1042.37	PASS	AB=0.877;AC=20;AF=0.370;AN=54;BaseQRankSum=1.863;DP=591;FS=5.487;HRun=1;HaplotypeScore=121.5648;InbreedingCoeff=0.1354;MQ=28.13;MQ0=76;MQRankSum=0.095;QD=3.30;ReadPosRankSum=1.776;VQSLOD=0.3145;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:30:14.11:0,14,190	1/1:2,1:3:3.01:40,3,0	0/0:26,0:2:6.02:0,6,76	0/0:50,0:10:30.10:0,30,376	1/1:9,2:10:6.02:80,6,0	0/0:22,0:18:18.82:0,19,186	0/0:36,0:26:23.46:0,23,218	0/1:12,3:13:81.41:81,0,273	0/0:17,0:15:13.50:0,14,125	0/1:20,1:15:7.11:7,0,291	1/1:6,2:10:4.83:44,5,0	0/1:18,4:22:1.70:291,0,2	0/1:12,0:10:9.43:9,0,42	0/1:17,5:21:52.58:102,0,53	1/1:12,2:13:11.92:140,12,0	0/1:20,0:15:20.87:21,0,131	0/0:19,0:18:20.49:0,20,179	0/1:14,3:14:99:149,0,165	0/0:15,0:13:30.44:0,30,357	0/0:10,0:8:3.90:0,4,39	0/1:70,1:45:30.60:31,0,67	0/1:18,0:15:13.10:13,0,100	0/1:10,1:6:31.94:34,0,32	1/1:21,5:21:14.35:169,14,0	0/0:21,0:17:26.73:0,27,252	0/0:12,0:9:21.07:0,21,270	0/0:11,0:10:9.01:0,9,124	./.
chr10	6913383	.	CACACA	C	1229.02	PASS	AB=0.922;AC=16;AF=0.296;AN=54;BaseQRankSum=1.561;DP=609;FS=11.667;HRun=0;HaplotypeScore=136.1654;InbreedingCoeff=-0.1336;MQ=26.99;MQ0=79;MQRankSum=-2.670;QD=4.88;ReadPosRankSum=1.000;VQSLOD=1.7676;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:31:14.30:0,14,190	0/0:4,0:3:2.19:0,2,8	0/0:36,0:1:3.01:0,3,37	0/0:49,0:8:24.08:0,24,298	0/0:14,0:12:5.38:0,5,39	0/1:19,3:19:27.25:165,0,27	0/1:30,5:27:25:90,0,25	0/1:18,0:16:36.72:37,0,370	0/1:13,1:14:40.85:110,0,41	0/1:21,0:15:43.13:43,0,284	0/1:9,0:10:0.43:0,0,4	0/0:30,0:23:0.47:0,0,248	0/1:15,0:12:6.97:7,0,74	0/0:28,0:23:16.35:0,16,139	0/0:15,0:12:11.70:0,12,90	1/1:16,3:15:17.03:305,17,0	0/1:13,2:15:99:159,0,129	0/1:19,0:14:12.62:13,0,181	0/1:14,0:14:99:110,0,251	1/1:9,1:8:5.70:62,6,0	0/0:73,0:47:8.79:0,9,83	0/0:16,0:13:6.02:0,6,75	0/0:13,0:6:5.38:0,5,46	0/0:25,0:20:14.49:0,14,158	0/1:18,3:16:15.22:266,0,15	0/0:14,0:10:24.04:0,24,272	0/1:11,0:10:13.73:14,0,124	./.
chr10	6913401	.	ACACACG	A	625.46	PASS	AB=0.929;AC=16;AF=0.333;AN=48;BaseQRankSum=3.291;DP=608;FS=3.743;HRun=0;HaplotypeScore=141.0537;InbreedingCoeff=-0.1658;MQ=23.76;MQ0=79;MQRankSum=-2.357;QD=2.10;ReadPosRankSum=-2.026;VQSLOD=2.1188;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:23:14.22:14,0,26	./.	./.	0/0:52,0:4:9.03:0,9,219	0/1:12,0:11:0:0,0,0	0/1:15,4:15:99:189,0,111	0/1:31,5:26:4:58,0,4	0/0:26,0:25:56.50:0,57,1622	0/1:11,5:12:26.81:104,0,27	0/0:27,0:18:10.40:0,10,698	./.	0/1:25,0:22:5.55:6,0,162	0/1:16,0:12:0.55:1,0,221	0/1:23,0:21:1.61:2,0,207	0/1:15,0:11:7.83:8,0,68	0/1:19,5:15:16.33:125,0,16	0/1:14,2:15:68.46:68,0,185	0/0:18,0:13:23.31:0,23,388	0/1:12,1:9:43.16:43,0,107	0/1:7,1:6:16.37:16,0,41	0/0:77,0:46:14.56:0,15,214	0/1:23,0:20:1.33:1,0,221	0/0:15,0:8:11.50:0,11,198	0/0:19,0:15:6:0,6,52	1/1:16,6:15:13.37:124,13,0	0/0:15,0:10:16.81:0,17,329	0/0:11,0:8:2.89:0,3,19	./.
chr10	6913403	.	ACACG	A	434	PASS	AB=0.976;AC=21;AF=0.438;AN=48;BaseQRankSum=4.526;DP=610;FS=16.105;HRun=0;HaplotypeScore=136.9377;InbreedingCoeff=-0.2017;MQ=23.57;MQ0=82;MQRankSum=-0.190;QD=1.21;ReadPosRankSum=-0.653;VQSLOD=1.6662;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:26,4:23:15.12:30,0,15	./.	./.	0/0:56,0:4:9.02:0,9,126	0/1:12,0:11:0:0,0,0	0/1:19,0:15:80.69:88,0,81	0/1:33,1:23:0.31:3,0,0	0/0:26,0:26:29.94:0,30,1446	1/1:14,2:12:0.88:52,1,0	0/1:28,0:18:15.16:15,0,625	./.	0/1:25,0:22:28.74:29,0,149	0/1:16,0:12:8.82:9,0,182	0/1:23,0:21:11.66:12,0,167	0/1:15,0:11:8.80:9,0,68	0/1:20,1:14:19.73:98,0,20	0/1:17,1:16:55.63:56,0,106	0/1:17,0:12:15.69:16,0,228	0/1:12,0:8:55.01:55,0,105	0/1:7,1:6:1.75:2,0,52	0/0:76,0:45:14.24:0,14,173	0/1:23,0:20:1.33:1,0,191	0/0:15,0:8:7.26:0,7,160	1/1:19,0:15:4.25:14,4,0	1/1:20,1:14:11.04:83,11,0	0/0:14,0:9:13.56:0,14,293	0/0:11,0:8:2.94:0,3,31	./.
chr10	6913405	.	ACG	A	555.87	PASS	AB=0.960;AC=22;AF=0.458;AN=48;BaseQRankSum=5.432;DP=607;FS=8.410;HRun=0;HaplotypeScore=131.4118;InbreedingCoeff=-0.1280;MQ=23.51;MQ0=79;MQRankSum=-0.977;QD=1.63;ReadPosRankSum=-1.061;VQSLOD=1.6758;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:22:9.97:15,0,10	./.	./.	0/0:59,0:4:9.03:0,9,137	0/1:12,0:11:0:0,0,0	0/1:17,2:15:11:69,0,11	1/1:30,1:21:2.86:15,3,0	0/0:24,1:25:21.34:0,21,915	1/1:14,2:12:4.74:57,5,0	0/0:28,0:18:8.10:0,8,375	./.	0/1:26,0:23:32.78:33,0,66	0/1:13,3:12:45.49:45,0,121	0/1:22,1:21:46.84:47,0,110	0/1:15,0:11:9.02:9,0,68	0/1:20,2:14:2.20:60,0,2	0/1:16,1:15:30.50:65,0,31	0/1:15,1:12:44.66:45,0,169	0/1:11,0:7:37.22:52,0,37	0/1:8,0:6:1.55:2,0,36	0/0:74,1:45:11.29:0,11,120	0/1:24,0:21:1.24:1,0,144	0/1:14,1:8:27.79:28,0,103	1/1:17,3:15:5.76:91,6,0	1/1:18,3:14:10.61:65,11,0	0/0:14,0:9:17.17:0,17,187	0/0:11,0:8:2.95:0,3,37	./.
chr10	6913434	.	A	ACACC	2707.99	PASS	AB=0.888;AC=23;AF=0.426;AN=54;BaseQRankSum=-1.172;DP=678;FS=6.525;HRun=0;HaplotypeScore=144.4403;InbreedingCoeff=-0.0350;MQ=24.76;MQ0=124;MQRankSum=1.354;QD=5.95;ReadPosRankSum=-1.033;VQSLOD=2.1755;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:26:12.92:13,0,65	1/1:6,0:6:2.67:87,3,0	0/0:29,0:3:8.97:0,9,106	./.	1/1:13,1:11:4.82:31,5,0	0/0:26,0:24:21.41:0,21,235	0/1:38,0:22:1.30:1,0,28	1/1:33,1:23:13.70:560,14,0	0/1:16,0:12:1.78:2,0,84	0/1:29,5:17:46.66:393,0,47	0/1:10,1:9:0:0,0,0	0/1:16,5:18:23.83:383,0,24	0/1:8,7:14:25.97:500,0,26	0/1:17,7:23:14.29:346,0,14	1/1:16,2:11:15.03:112,15,0	0/0:26,0:16:7.62:0,8,135	0/0:22,0:17:24.89:0,25,217	0/1:20,1:13:83.23:175,0,83	0/0:26,0:17:44.69:0,45,348	0/0:12,0:9:5.93:0,6,47	0/1:75,2:38:57.24:57,0,152	0/1:18,3:20:6.71:81,0,7	0/0:11,3:11:3.80:0,4,136	0/1:21,1:18:57.38:57,0,75	0/0:19,0:12:4.62:0,5,32	0/1:11,0:9:20.69:59,0,21	1/1:12,0:7:0.72:2,1,0	0/0:3,0:2:1.25:0,1,3
chr10	6913444	.	CA	C	651.72	PASS	AB=0.886;AC=18;AF=0.346;AN=52;BaseQRankSum=-0.283;DP=620;FS=2.051;HRun=2;HaplotypeScore=132.9255;InbreedingCoeff=-0.0462;MQ=27.65;MQ0=104;MQRankSum=-3.760;QD=1.95;ReadPosRankSum=-0.228;VQSLOD=-0.7339;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:18,5:21:14.11:102,14,0	0/0:9,0:8:20.01:0,20,115	0/0:27,1:3:6.02:0,6,80	./.	0/0:13,0:9:11.63:0,12,66	0/1:18,7:23:45.81:46,0,107	0/1:29,6:21:11.22:65,0,11	0/1:31,0:17:31.55:32,0,77	0/1:19,1:13:3.50:4,0,39	0/0:34,0:19:29.62:0,30,250	./.	0/0:15,1:15:2.97:0,3,122	0/0:13,0:10:3.17:0,3,49	0/1:30,1:26:18.44:18,0,97	0/0:19,0:12:20.27:0,20,117	0/1:17,5:16:31.18:31,0,64	0/1:19,5:16:41.04:133,0,41	0/0:20,0:13:19.53:0,20,171	0/1:24,4:19:84.37:84,0,185	0/1:11,3:10:15.86:16,0,48	0/0:63,2:35:22.66:0,23,168	0/1:22,0:17:13.42:13,0,35	0/1:14,1:11:6.77:7,0,17	0/0:23,0:18:19.10:0,19,109	1/1:13,3:12:7.75:70,8,0	0/1:9,3:8:0.79:143,0,1	1/1:12,1:7:4.83:43,5,0	0/0:2,0:2:2.22:0,2,7
chr10	6913445	.	A	AC	813.37	PASS	AB=0.942;AC=19;AF=0.365;AN=52;BaseQRankSum=0.301;DP=608;FS=0.611;HRun=1;HaplotypeScore=130.2790;InbreedingCoeff=-0.1124;MQ=28.19;MQ0=102;MQRankSum=-5.679;QD=2.43;ReadPosRankSum=0.325;VQSLOD=-0.6227;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:21:0.43:83,0,0	0/0:10,0:8:19.61:0,20,104	0/0:29,0:3:6.02:0,6,80	./.	0/0:13,0:9:11.58:0,12,63	0/1:20,5:24:16.27:16,0,107	0/1:34,0:21:9.65:83,0,10	0/1:27,0:13:12.68:13,0,80	0/1:16,1:13:3.61:4,0,39	0/0:33,0:19:26.01:0,26,217	./.	0/0:17,0:15:0.47:0,0,105	0/1:15,0:11:5.34:5,0,28	0/1:28,1:24:24.80:25,0,78	0/0:17,0:12:20:0,20,112	0/1:20,2:16:60.87:69,0,61	0/1:21,2:17:40.52:190,0,41	0/0:20,0:13:23.52:0,24,165	0/1:25,2:19:99:125,0,183	0/1:12,0:8:18.77:19,0,34	0/0:65,0:34:22.34:0,22,162	0/1:20,0:15:13.76:14,0,31	0/1:13,0:10:6.79:7,0,17	0/0:22,0:17:18.74:0,19,99	1/1:13,4:13:7.77:70,8,0	1/1:8,3:8:0.65:167,1,0	1/1:12,1:7:6.02:72,6,0	0/0:3,0:3:2.04:0,2,6
chr10	6913459	.	CACA	C	2269.20	PASS	AB=0.990;AC=28;AF=0.500;AN=56;BaseQRankSum=2.912;DP=611;FS=0.000;HRun=0;HaplotypeScore=122.2658;InbreedingCoeff=0.4653;MQ=34.27;MQ0=88;MQRankSum=2.066;QD=5.47;ReadPosRankSum=1.774;VQSLOD=2.6284;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:31,0:26:25.91:26,0,185	1/1:11,0:8:3.74:99,4,0	0/0:15,0:1:3.01:0,3,38	0/0:24,0:7:15.52:0,16,225	1/1:20,0:12:21.53:209,22,0	0/1:26,0:24:2:2,0,184	0/0:37,0:25:20.05:0,20,292	1/1:27,0:14:21.67:326,22,0	0/0:17,0:13:13.56:0,14,275	0/1:31,0:23:87.58:349,0,88	1/1:13,0:8:4.83:45,5,0	0/1:20,0:13:52.67:100,0,53	1/1:14,0:10:17.05:110,17,0	0/1:26,0:20:7.18:171,0,7	1/1:15,2:13:23.81:202,24,0	0/1:23,0:19:3.85:4,0,233	0/0:22,0:17:25.23:0,25,431	1/1:20,0:17:16.35:306,16,0	0/0:23,0:19:47.89:0,48,679	0/0:12,0:7:3.01:0,3,52	1/1:71,0:37:23.14:233,23,0	1/1:21,0:15:21.37:168,21,0	1/1:10,5:13:3.62:12,4,0	1/1:21,0:15:6.51:99,7,0	0/0:17,0:14:5.83:0,6,175	0/0:12,0:11:8.67:0,9,316	0/0:12,0:7:9.50:0,10,156	0/0:5,0:5:12.04:0,12,213
chr10	6913461	.	CA	C	4210.02	PASS	AB=0.812;AC=28;AF=0.519;AN=54;BaseQRankSum=2.272;DP=604;FS=1.040;HRun=1;HaplotypeScore=113.8918;InbreedingCoeff=0.6111;MQ=36.96;MQ0=81;MQRankSum=0.680;QD=11.35;ReadPosRankSum=3.250;VQSLOD=3.2952;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:30,1:26:17.95:18,0,177	1/1:4,9:9:12.39:245,12,0	./.	0/0:25,0:11:27.55:0,28,334	1/1:6,14:12:24.08:328,24,0	0/0:28,0:26:16.19:0,16,240	0/0:37,0:25:15.96:0,16,233	1/1:13,15:15:20.34:487,20,0	0/0:17,0:13:14.30:0,14,245	0/1:13,18:23:46.67:521,0,47	1/1:4,7:7:4.83:45,5,0	0/1:9,11:13:50.57:192,0,51	1/1:0,13:10:14.46:183,14,0	1/1:7,18:20:26.17:441,26,0	1/1:4,13:14:26.03:339,26,0	0/0:23,1:20:8.68:0,9,234	0/0:23,0:18:29.61:0,30,389	1/1:5,15:17:38.34:500,38,0	0/0:20,0:16:48.07:0,48,588	0/0:12,0:7:3.01:0,3,45	1/1:41,28:36:26.55:372,27,0	1/1:11,11:15:23.12:211,23,0	1/1:10,5:13:5.56:30,6,0	1/1:6,14:14:20.77:291,21,0	0/0:16,0:13:7.16:0,7,153	0/1:13,0:12:6.30:6,0,265	0/0:12,0:7:9.50:0,10,123	0/0:5,0:5:12.04:0,12,171
chr10	6913998	.	GCCTTCTAA	G	4921.66	PASS	AB=0.514;AC=5;AF=0.089;AN=56;BaseQRankSum=11.040;DP=696;FS=17.528;HRun=0;HaplotypeScore=188.0256;InbreedingCoeff=0.7781;MQ=81.71;MQ0=0;MQRankSum=-10.125;QD=80.68;ReadPosRankSum=1.939;VQSLOD=3.5317;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:78.27:0,78,3387	0/0:12,0:12:36.12:0,36,1661	0/0:24,0:24:69.24:0,69,2945	0/0:23,0:23:69.24:0,69,3053	0/0:40,0:40:99:0,120,4890	0/0:34,0:34:99:0,102,4721	0/0:16,0:16:48.16:0,48,2136	0/0:34,0:33:99:0,102,4411	0/0:15,0:15:45.15:0,45,2067	0/0:24,0:24:69.71:0,70,2857	0/0:20,0:20:60.21:0,60,2656	0/0:36,0:36:99:0,108,4897	0/0:36,0:36:99:0,108,4870	0/0:20,0:20:60.21:0,60,2778	0/0:25,0:25:75.26:0,75,3406	0/0:34,0:34:99:0,102,4467	0/0:25,0:25:75.26:0,75,3402	0/0:10,0:10:30.10:0,30,1263	0/0:30,0:30:90.31:0,90,3972	0/0:30,0:30:90.31:0,90,4044	0/0:40,0:40:99:0,120,5222	0/0:21,0:21:63.22:0,63,2740	0/0:24,0:24:72.25:0,72,3098	0/0:24,0:24:72.25:0,72,3334	0/0:12,0:12:36.12:0,36,1621	0/1:1,18:19:81.81:1470,0,82	1/1:0,35:35:93.32:2815,93,0	1/1:0,7:7:21.07:636,21,0
chr10	6918106	.	G	GC	12300.53	PASS	AC=50;AF=0.926;AN=54;BaseQRankSum=-5.291;DP=366;FS=1.040;HRun=4;HaplotypeScore=31.9694;InbreedingCoeff=0.9059;MQ=72.70;MQ0=0;MQRankSum=-6.329;QD=35.04;ReadPosRankSum=4.168;VQSLOD=4.4312;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,17:19:51.17:693,51,0	1/1:1,5:6:15.05:205,15,0	0/0:7,0:7:21.05:0,21,230	0/0:8,0:8:21.01:0,21,214	1/1:0,9:9:21.07:286,21,0	1/1:1,12:13:24.08:328,24,0	1/1:2,16:18:42.14:574,42,0	1/1:0,9:9:27.09:361,27,0	1/1:0,6:6:18.06:246,18,0	1/1:1,13:15:45.07:568,45,0	1/1:0,3:3:9.03:123,9,0	1/1:1,17:18:48.16:656,48,0	1/1:0,9:9:27.09:369,27,0	1/1:0,12:12:30.10:410,30,0	1/1:0,8:8:24.08:328,24,0	1/1:0,6:6:15.05:205,15,0	1/1:0,30:30:84.28:1145,84,0	1/1:0,29:29:81.24:1088,81,0	1/1:1,17:18:47.90:572,48,0	1/1:1,3:4:12.04:161,12,0	1/1:3,38:41:96.30:1295,96,0	1/1:1,3:4:12.04:156,12,0	1/1:1,5:6:18.05:233,18,0	1/1:4,31:35:87.29:1189,87,0	1/1:1,9:10:24.08:328,24,0	1/1:0,7:7:18.06:246,18,0	1/1:0,16:16:39.13:533,39,0	./.
chr10	6918529	.	C	CT	5265.32	PASS	AB=0.675;AC=28;AF=0.500;AN=56;BaseQRankSum=-7.159;DP=600;FS=3.259;HRun=10;HaplotypeScore=70.1978;InbreedingCoeff=0.8397;MQ=74.01;MQ0=0;MQRankSum=-2.457;QD=16.40;ReadPosRankSum=-0.607;VQSLOD=5.2334;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:42:76.77:0,77,618	1/1:1,14:15:30.07:320,30,0	0/0:9,0:10:17.92:0,18,113	0/0:13,0:13:9.92:0,10,71	1/1:9,11:20:22.37:214,22,0	0/0:20,0:21:37.91:0,38,301	0/0:25,0:25:68.88:0,69,563	1/1:9,25:35:53.27:588,53,0	0/0:19,0:20:43.95:0,44,347	1/1:8,20:28:30.11:454,30,0	1/1:4,5:10:12.82:104,13,0	1/1:6,26:32:29.32:519,29,0	1/1:6,13:19:30.08:320,30,0	1/1:4,20:24:39.10:416,39,0	1/1:2,16:19:20.47:423,20,0	0/0:28,0:29:67.92:0,68,548	0/0:31,0:32:82.93:0,83,671	1/1:3,15:18:23.45:444,23,0	0/0:13,0:13:32.96:0,33,271	0/1:11,4:15:11.07:11,0,127	0/1:5,17:23:13.33:267,0,13	1/1:3,16:19:36.04:364,36,0	1/1:4,11:15:20.81:214,21,0	1/1:3,26:29:57.14:608,57,0	0/0:16,0:17:31.96:0,32,252	0/0:14,0:14:26.80:0,27,212	0/0:26,0:26:56.88:0,57,468	0/0:15,2:17:6.96:0,7,264
chr10	6919323	.	C	CGTTCCTTATCAGA	87707.20	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-6.331;DP=725;FS=4.687;HRun=0;HaplotypeScore=220.0968;InbreedingCoeff=0.9970;MQ=77.54;MQ0=8;MQRankSum=-10.789;QD=130.91;ReadPosRankSum=5.759;VQSLOD=4.3838;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,10:25:57.20:3353,57,0	1/1:6,4:10:30.10:1537,30,0	0/0:31,0:30:63.18:0,63,1972	0/0:24,0:24:63.22:0,63,2092	1/1:13,14:32:60.08:3099,60,0	1/1:9,7:17:39.10:2175,39,0	1/1:20,5:25:39.09:1896,39,0	1/1:33,2:41:99:5176,114,0	1/1:11,15:27:75.26:4568,75,0	1/1:18,10:28:84.28:4321,84,0	1/1:13,8:23:42.14:2522,42,0	1/1:11,12:25:66.23:4048,66,0	1/1:13,8:22:45.15:2679,45,0	1/1:17,11:28:66.23:3661,66,0	1/1:18,14:37:87.30:5077,87,0	1/1:18,15:38:87.30:5059,87,0	1/1:11,7:20:45.15:2637,45,0	1/1:7,5:12:24.04:1301,24,0	1/1:7,7:16:48.15:2292,48,0	1/1:10,12:23:60.21:3493,60,0	1/1:10,4:16:27.09:1453,27,0	1/1:15,12:29:60.21:3644,60,0	1/1:19,9:30:60.21:3317,60,0	1/1:11,5:16:24.08:1441,24,0	1/1:13,11:26:60.21:3358,60,0	1/1:14,20:37:99:6363,108,0	1/1:18,21:41:99:6365,108,0	1/1:8,9:18:48.16:2871,48,0
chr10	6920921	.	G	GCTAC	7467.11	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-8.713;DP=452;FS=19.809;HRun=0;HaplotypeScore=151.6141;InbreedingCoeff=0.9633;MQ=70.90;MQ0=0;MQRankSum=-1.714;QD=53.34;ReadPosRankSum=2.553;VQSLOD=4.6370;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:33.07:0,33,544	0/0:11,0:11:21.07:0,21,386	0/0:13,0:12:24.05:0,24,408	0/0:20,0:17:33.10:0,33,562	0/0:16,0:16:24.06:0,24,374	1/1:3,4:7:8.99:142,9,0	1/1:8,23:32:81.28:2119,81,0	0/0:23,0:23:54.18:0,54,949	1/1:5,7:12:27.03:597,27,0	0/0:15,0:15:39.13:0,39,697	0/0:8,0:8:18.03:0,18,260	0/0:23,0:23:42.14:0,42,752	0/0:22,0:22:33.08:0,33,560	0/0:11,0:11:21.07:0,21,356	0/0:13,0:13:24.08:0,24,436	1/1:5,12:18:42.14:1095,42,0	1/1:13,16:30:60.16:1461,60,0	0/0:16,0:16:12.02:0,12,181	1/1:2,10:12:27.09:708,27,0	1/1:2,9:12:24.08:627,24,0	0/0:30,0:30:12.04:0,12,220	0/0:7,0:7:9.03:0,9,156	0/0:13,0:13:24.08:0,24,435	0/0:28,0:28:24.08:0,24,430	1/1:3,13:17:29.31:717,29,0	0/0:8,0:8:24.08:0,24,442	0/0:12,0:12:36.12:0,36,662	0/0:6,0:6:18.06:0,18,331
chr10	6920934	.	CGCCCGCCTGCCTGCCTGCCT	C	11673.54	PASS	AB=0.909;AC=29;AF=0.518;AN=56;BaseQRankSum=7.363;DP=489;FS=11.962;HRun=0;HaplotypeScore=230.0635;InbreedingCoeff=0.8506;MQ=58.00;MQ0=0;MQRankSum=-5.514;QD=40.96;ReadPosRankSum=4.016;VQSLOD=2.2959;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:36.07:0,36,2574	1/1:0,13:13:21.07:1178,21,0	0/0:11,0:6:15.01:0,15,421	0/0:15,0:12:30.02:0,30,1797	1/1:1,21:22:17.44:669,17,0	0/0:7,0:7:15.04:0,15,927	0/0:28,0:27:76.88:0,77,4291	1/1:3,13:16:35.09:378,35,0	0/0:12,0:12:27.09:0,27,2047	1/1:3,20:23:47.15:935,47,0	1/1:2,12:14:9.03:505,9,0	1/1:2,26:28:39.13:2129,39,0	1/1:0,21:21:36.12:2007,36,0	1/1:0,15:15:15.05:842,15,0	1/1:0,12:12:21.07:1179,21,0	0/0:17,0:17:39.13:0,39,2592	0/0:34,0:34:62.17:0,62,4012	1/1:1,20:21:3.01:169,3,0	0/0:14,0:14:35.98:0,36,2194	0/0:11,0:11:24.08:0,24,1451	1/1:0,41:41:5.81:127,6,0	1/1:1,10:11:6.02:337,6,0	1/1:7,0:7:10.83:69,11,0	1/1:1,30:31:18.06:1010,18,0	0/0:18,0:18:41.01:0,41,1636	0/1:9,1:10:99:138,0,1345	0/0:17,0:17:51.08:0,51,2941	0/0:6,0:6:18.06:0,18,1583
chr10	6920938	.	C	CGCCT	2648.35	PASS	AC=16;AF=0.308;AN=52;BaseQRankSum=-5.965;DP=491;FS=7.975;HRun=0;HaplotypeScore=157.3216;InbreedingCoeff=0.8232;MQ=57.34;MQ0=0;MQRankSum=-0.194;QD=17.09;ReadPosRankSum=-2.696;VQSLOD=1.8716;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:28.91:0,29,355	0/0:13,0:13:20.81:0,21,159	0/0:11,0:5:2.94:0,3,18	0/0:15,0:12:7.14:0,7,122	0/0:21,0:21:9.01:0,9,84	1/1:3,4:7:9.03:217,9,0	1/1:23,5:27:29.96:471,30,0	0/0:13,0:13:3:0,3,27	1/1:4,8:13:18.05:386,18,0	0/0:20,0:20:11.68:0,12,110	0/0:12,0:12:9.01:0,9,84	0/0:27,0:27:36.03:0,36,334	0/0:21,0:21:30.96:0,31,251	0/0:15,0:15:15.02:0,15,140	0/0:12,0:12:21.02:0,21,195	1/1:7,11:18:18.06:434,18,0	1/1:14,25:42:33.05:648,33,0	0/0:20,0:20:3:0,3,28	1/1:16,0:15:16.23:175,16,0	1/1:8,3:11:9.02:170,9,0	./.	0/0:10,0:10:6:0,6,56	./.	0/0:30,0:30:17.76:0,18,152	1/1:15,5:20:20.43:335,20,0	0/0:11,0:11:14.93:0,15,121	0/0:15,0:15:23.67:0,24,288	0/0:7,0:7:17.95:0,18,232
chr10	6929104	.	CA	C	11093.81	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=3.134;DP=395;FS=5.834;HRun=4;HaplotypeScore=63.4402;InbreedingCoeff=0.9538;MQ=78.10;MQ0=0;MQRankSum=-7.154;QD=31.61;ReadPosRankSum=6.396;VQSLOD=4.7668;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,18:18:42.13:499,42,0	1/1:0,5:5:15.05:180,15,0	0/0:22,0:18:54.14:0,54,713	0/0:22,0:20:58.33:0,58,701	1/1:1,9:10:27.08:322,27,0	1/1:0,10:10:30.09:359,30,0	1/1:3,15:18:33.10:395,33,0	1/1:0,18:18:45.14:540,45,0	1/1:0,6:6:18.06:215,18,0	1/1:2,7:9:24.07:288,24,0	1/1:0,8:8:21.06:251,21,0	1/1:0,14:14:39.12:466,39,0	1/1:0,16:16:42.13:502,42,0	1/1:0,12:12:36.11:431,36,0	1/1:0,23:23:69.21:826,69,0	1/1:0,13:13:33.10:395,33,0	1/1:2,23:25:57.17:683,57,0	1/1:0,9:9:27.08:324,27,0	1/1:0,17:15:45.14:539,45,0	1/1:0,9:9:27.08:322,27,0	1/1:0,22:22:54.16:646,54,0	1/1:0,13:13:33.10:393,33,0	1/1:2,10:12:30.09:359,30,0	1/1:0,15:15:39.05:449,39,0	1/1:1,14:15:42.13:503,42,0	1/1:0,15:15:45.13:528,45,0	1/1:0,16:16:48.15:572,48,0	1/1:0,3:3:9.03:108,9,0
chr10	6931341	.	TGAGAGAGA	T	2608.13	PASS	AB=0.929;AC=27;AF=0.482;AN=56;BaseQRankSum=0.799;DP=626;FS=13.251;HRun=0;HaplotypeScore=158.1612;InbreedingCoeff=0.6027;MQ=70.67;MQ0=29;MQRankSum=0.336;QD=7.17;ReadPosRankSum=2.225;VQSLOD=1.9093;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:21:1.41:0,1,3	1/1:11,1:11:11.01:309,11,0	0/1:39,0:29:7.49:7,0,96	0/1:47,0:24:2.25:11,0,2	1/1:26,1:28:17.86:417,18,0	0/0:21,0:22:30.09:0,30,820	0/0:23,0:21:32.75:0,33,834	1/1:25,7:29:20.88:357,21,0	0/0:15,0:15:25.02:0,25,812	1/1:15,4:20:24.07:450,24,0	1/1:12,3:16:8.82:161,9,0	1/1:17,20:36:0.50:1,1,0	1/1:11,0:11:20.86:438,21,0	1/1:12,11:25:8.30:99,8,0	1/1:12,20:30:0.94:2,1,0	0/0:26,0:25:13.84:0,14,596	0/0:17,0:15:21.06:0,21,628	0/1:8,1:11:50.45:318,0,50	0/0:14,0:11:9.03:0,9,181	0/0:16,0:15:11.99:0,12,294	0/0:16,13:27:0:0,0,0	1/1:10,0:8:12.04:214,12,0	1/1:8,8:15:0.47:1,0,0	1/1:12,13:23:0.94:2,1,0	0/0:15,0:14:12.51:0,13,399	0/0:17,0:18:36.12:0,36,1033	0/0:3,0:31:6.01:0,6,109	0/0:3,0:10:5.23:0,5,110
chr10	6931405	.	TGAGAGA	T	4063.88	PASS	AB=0.830;AC=31;AF=0.596;AN=52;BaseQRankSum=-3.251;DP=636;FS=22.841;HRun=0;HaplotypeScore=138.7316;InbreedingCoeff=0.5337;MQ=39.60;MQ0=105;MQRankSum=2.406;QD=9.19;ReadPosRankSum=0.027;VQSLOD=1.2522;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:16:5.11:92,5,0	1/1:16,0:14:21.01:329,21,0	./.	./.	0/1:10,22:32:0.01:0,0,0	0/0:32,0:28:2.78:0,3,19	0/0:24,0:15:8.69:0,9,82	0/0:33,0:31:2.04:0,2,6	0/0:18,0:15:11.06:0,11,198	1/1:16,10:19:22:361,22,0	0/1:8,11:19:0:0,0,0	1/1:28,0:27:23.96:420,24,0	0/1:13,1:10:16.55:49,0,17	1/1:23,0:19:21.12:333,21,0	1/1:26,0:26:17.75:251,18,0	0/1:36,0:30:6.40:6,0,213	0/0:22,0:11:12.04:0,12,277	1/1:9,0:6:6.02:120,6,0	0/0:20,0:17:20.93:0,21,413	0/0:15,0:11:6.49:0,6,153	0/1:33,0:25:49.34:49,0,125	1/1:25,0:20:21.07:363,21,0	1/1:23,0:18:15.01:243,15,0	1/1:29,0:24:22.89:293,23,0	0/0:30,0:24:2.97:0,3,76	1/1:23,0:20:21.94:362,22,0	1/1:32,0:32:48.80:789,49,0	1/1:11,0:9:1.06:4,1,0
chr10	6931407	.	A	AGT	568.19	PASS	AB=0.948;AC=23;AF=0.460;AN=50;BaseQRankSum=1.775;DP=587;FS=3.515;HRun=0;HaplotypeScore=127.5640;InbreedingCoeff=-0.1220;MQ=40.15;MQ0=101;MQRankSum=-2.691;QD=1.29;ReadPosRankSum=-0.350;VQSLOD=1.8410;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:16:3.88:14,0,4	0/1:16,0:14:10.15:10,0,32	./.	./.	0/1:30,0:29:0:0,0,0	0/1:9,19:24:7.55:12,0,8	1/1:23,0:14:5.78:122,6,0	0/1:26,0:26:26.45:26,0,234	0/1:14,0:11:4.68:48,0,5	0/1:24,0:18:0.12:0,0,63	./.	0/1:29,0:27:10.17:15,0,10	0/0:13,0:9:1.23:0,1,17	0/0:19,0:16:4.01:0,4,24	0/1:29,0:27:4.28:9,0,4	0/1:13,18:27:12.48:12,0,13	0/1:19,0:9:26.17:59,0,26	0/0:9,0:6:8.18:0,8,38	1/1:20,0:16:3.58:177,4,0	1/1:5,10:11:6.02:103,6,0	0/1:29,0:22:21.10:21,0,29	0/0:25,0:20:2.37:0,2,33	0/1:23,0:18:6.72:7,0,7	0/0:27,0:23:3.03:0,3,24	0/1:26,0:20:0.06:0,0,0	1/1:19,0:15:3.15:49,3,0	0/0:32,0:29:3.44:0,3,48	0/1:17,0:9:2.79:11,0,3
chr10	6931777	.	TA	T	8452.91	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=2.020;DP=586;FS=15.898;HRun=12;HaplotypeScore=64.9140;InbreedingCoeff=0.9174;MQ=71.57;MQ0=0;MQRankSum=-1.823;QD=16.04;ReadPosRankSum=3.752;VQSLOD=4.3482;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:75.11:0,75,741	1/1:3,10:13:29.83:227,30,0	0/0:17,0:15:17.22:0,17,124	0/0:10,0:9:4.30:0,4,72	1/1:1,25:26:71.66:553,72,0	1/1:5,25:30:74.70:580,75,0	1/1:1,13:15:37.88:284,38,0	1/1:6,17:25:54.45:391,54,0	1/1:2,10:12:26.90:209,27,0	1/1:8,17:25:41.66:313,42,0	1/1:0,17:17:41.82:325,42,0	1/1:3,14:17:41.80:325,42,0	1/1:6,25:31:26.30:387,26,0	1/1:3,20:23:47.78:371,48,0	1/1:4,24:28:56.76:441,57,0	1/1:3,12:15:29.87:232,30,0	1/1:1,25:27:67.78:517,68,0	1/1:6,18:24:17.34:318,17,0	1/1:4,11:15:32.84:250,33,0	1/1:5,15:20:41.83:325,42,0	1/1:1,8:9:23.91:186,24,0	1/1:4,15:19:38.82:302,39,0	1/1:6,14:20:35.83:279,36,0	1/1:3,19:22:50.78:395,51,0	1/1:4,21:26:49.84:377,50,0	1/1:11,19:30:30.62:365,31,0	1/1:9,24:33:56.56:431,57,0	1/1:1,4:5:8.96:70,9,0
chr10	6932795	.	GGGGA	G	3026.74	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=-8.388;DP=363;FS=6.805;HRun=0;HaplotypeScore=81.5314;InbreedingCoeff=0.3032;MQ=89.05;MQ0=9;MQRankSum=-3.769;QD=19.16;ReadPosRankSum=2.956;VQSLOD=2.5319;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,20:21:45.15:801,45,0	0/0:5,0:5:11.73:0,12,149	0/0:44,0:31:56.01:0,56,1024	0/0:29,0:17:25.05:0,25,497	0/0:4,0:4:3.01:0,3,54	0/1:13,0:13:12.86:13,0,14	0/1:17,0:16:9.70:10,0,71	0/1:12,0:11:28:116,0,28	0/0:11,0:11:1.99:0,2,44	0/0:3,0:3:6.02:0,6,82	0/0:7,0:7:11.98:0,12,134	0/1:10,0:10:1.46:1,0,44	0/0:11,0:11:8.31:0,8,41	0/1:14,0:14:1.34:1,0,19	0/0:4,0:4:9.03:0,9,149	0/0:6,0:6:6.60:0,7,31	0/0:19,0:18:25.53:0,26,76	0/0:15,0:15:19.17:0,19,504	0/0:16,0:16:7.55:0,8,92	0/0:7,0:6:5.45:0,5,16	0/1:9,0:9:0.68:1,0,168	0/0:8,0:8:4.81:0,5,30	0/0:8,0:8:0.89:0,1,4	0/1:9,0:9:12.48:12,0,76	0/0:8,0:8:3.63:0,4,10	1/1:0,16:16:45.09:722,45,0	1/1:3,17:20:42.08:747,42,0	1/1:0,17:17:42.14:762,42,0
chr10	6932796	.	GGGA	G	2406.48	PASS	AB=0.928;AC=36;AF=0.643;AN=56;BaseQRankSum=-1.073;DP=365;FS=9.942;HRun=0;HaplotypeScore=78.7410;InbreedingCoeff=0.5184;MQ=88.71;MQ0=10;MQRankSum=-2.416;QD=9.44;ReadPosRankSum=5.682;VQSLOD=1.7980;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:20,1:21:45.07:429,45,0	0/0:5,0:5:9.96:0,10,100	0/0:44,0:31:68.23:0,68,910	0/0:28,0:16:25.74:0,26,411	0/0:4,0:4:3.01:0,3,39	1/1:11,2:13:21.30:154,21,0	0/1:15,2:16:2.78:86,0,3	1/1:13,0:11:2.01:120,2,0	1/1:10,0:10:20.27:79,20,0	0/0:3,0:3:6.01:0,6,63	0/0:7,0:7:9.47:0,9,68	0/1:11,0:11:14.34:18,0,14	1/1:11,0:11:7.46:27,7,0	1/1:14,0:14:17.75:68,18,0	0/0:4,0:4:9.03:0,9,104	1/1:8,0:8:4.97:18,5,0	1/1:18,0:18:28.83:124,29,0	0/0:15,0:15:17.36:0,17,337	1/1:15,0:15:11.70:100,12,0	1/1:8,0:7:7.49:26,7,0	0/1:9,0:9:22.88:23,0,114	1/1:8,0:8:2.49:9,2,0	1/1:8,0:8:2.37:8,2,0	0/1:7,2:9:12.55:90,0,13	1/1:8,0:8:5.48:31,5,0	1/1:16,0:16:43.26:388,43,0	1/1:18,1:20:41.88:384,42,0	1/1:17,0:17:42.07:412,42,0
chr10	6932797	.	GGA	G	4188.77	PASS	AB=0.975;AC=42;AF=0.750;AN=56;BaseQRankSum=-5.057;DP=350;FS=13.318;HRun=0;HaplotypeScore=66.6977;InbreedingCoeff=0.4835;MQ=87.11;MQ0=10;MQRankSum=-2.856;QD=15.57;ReadPosRankSum=3.770;VQSLOD=2.5659;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:21:44.80:339,45,0	0/0:5,0:5:7.98:0,8,49	0/0:40,0:28:55.62:0,56,612	0/0:27,1:16:18.52:0,19,292	0/0:4,0:4:2.99:0,3,24	1/1:2,11:13:23.94:264,24,0	1/1:2,14:15:20.96:243,21,0	1/1:13,0:11:24.45:153,24,0	1/1:0,10:10:23.99:302,24,0	0/1:3,0:3:17.81:22,0,18	0/1:7,0:7:8.22:40,0,8	1/1:0,9:9:8.70:93,9,0	1/1:0,10:10:9.03:123,9,0	1/1:0,14:14:20.96:259,21,0	0/0:4,0:4:8.87:0,9,58	1/1:0,7:7:6.02:82,6,0	1/1:1,17:17:35.86:481,36,0	0/1:15,0:15:4.79:5,0,160	1/1:5,9:14:33.01:405,33,0	1/1:1,7:7:9.03:122,9,0	0/1:8,1:9:38.79:39,0,64	1/1:0,6:6:3.01:41,3,0	1/1:1,7:8:3.01:40,3,0	1/1:5,2:7:14.87:124,15,0	1/1:1,7:8:6.02:81,6,0	1/1:16,0:16:42.25:315,42,0	1/1:20,0:20:41.03:300,41,0	1/1:17,0:17:41.82:317,42,0
chr10	6932798	.	GA	G	2517.61	PASS	AB=1.000;AC=46;AF=0.821;AN=56;BaseQRankSum=-3.734;DP=346;FS=7.279;HRun=1;HaplotypeScore=67.4044;InbreedingCoeff=0.4543;MQ=85.39;MQ0=10;MQRankSum=-2.981;QD=9.19;ReadPosRankSum=3.052;VQSLOD=1.1657;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:21:43.76:249,44,0	1/1:5,0:5:4.17:20,4,0	0/0:37,0:25:42.88:0,43,418	0/0:27,0:16:12.89:0,13,180	0/0:3,1:4:2.04:0,2,6	1/1:13,0:13:23.50:150,23,0	1/1:16,0:15:20.54:121,21,0	1/1:12,1:11:32.48:224,32,0	1/1:10,0:10:23.50:140,24,0	1/1:3,0:3:3:29,3,0	1/1:6,1:7:5.61:76,6,0	1/1:9,0:9:8.63:47,9,0	1/1:10,0:10:8.83:53,9,0	1/1:14,0:14:20.54:121,21,0	0/0:4,0:4:3.01:0,3,7	1/1:7,0:7:5.88:35,6,0	1/1:18,0:17:33.82:205,34,0	0/1:16,0:16:8.62:42,0,9	1/1:13,0:14:32.33:196,32,0	1/1:8,0:7:8.83:53,9,0	0/1:8,0:8:15.64:43,0,16	1/1:6,0:6:2.94:18,3,0	1/1:7,1:8:2.92:17,3,0	1/1:7,0:7:14.67:89,15,0	1/1:7,0:8:5.92:40,6,0	1/1:16,0:16:40.88:243,41,0	1/1:20,0:20:38.08:216,38,0	1/1:17,0:17:40.98:236,41,0
chr10	6932905	.	TG	T	3487.46	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=8.087;DP=515;FS=8.714;HRun=7;HaplotypeScore=67.7371;InbreedingCoeff=0.9956;MQ=85.14;MQ0=2;MQRankSum=0.086;QD=25.83;ReadPosRankSum=1.190;VQSLOD=4.1285;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,102,1269	0/0:8,0:8:17.98:0,18,226	0/0:31,0:25:31.53:0,32,498	0/0:30,0:22:22.74:0,23,395	0/0:20,0:20:54.15:0,54,648	1/1:1,15:16:36.08:367,36,0	1/1:0,17:17:45.10:459,45,0	0/0:21,0:21:57.17:0,57,701	1/1:2,14:16:39.07:398,39,0	0/0:19,0:19:48.15:0,48,604	0/0:16,0:16:47.82:0,48,577	0/0:8,0:8:24.07:0,24,296	0/0:18,0:18:45.13:0,45,554	0/0:13,0:13:39.11:0,39,478	0/0:16,0:16:45.14:0,45,566	1/1:0,15:15:45.10:459,45,0	1/1:3,18:21:16.39:482,16,0	0/0:25,0:25:66.19:0,66,804	1/1:2,16:18:48.08:476,48,0	1/1:0,13:13:39.09:398,39,0	0/0:21,0:21:60.14:0,60,698	0/0:18,0:18:48.15:0,48,603	0/0:19,0:19:54.16:0,54,666	0/0:11,0:11:30.10:0,30,377	1/1:2,17:19:45.06:448,45,0	0/0:20,0:20:60.19:0,60,753	0/0:17,0:17:48.15:0,48,604	0/0:13,0:13:33.11:0,33,414
chr10	6934123	.	A	AAGCCCCCTCTTGT	86939.07	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-3.996;DP=776;FS=0.679;HRun=0;HaplotypeScore=235.3545;InbreedingCoeff=0.9995;MQ=70.01;MQ0=0;MQRankSum=-18.104;QD=141.83;ReadPosRankSum=1.347;VQSLOD=5.0791;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:90.30:0,90,3394	1/1:5,5:10:30.10:1886,30,0	0/0:17,0:17:48.13:0,48,1361	0/0:24,0:24:66.01:0,66,2081	1/1:13,11:27:57.19:3035,57,0	1/1:18,13:34:93.32:5302,93,0	1/1:14,6:25:57.19:2715,57,0	1/1:31,3:39:92.39:5118,92,0	1/1:12,17:33:87.30:5252,87,0	1/1:29,19:49:99:7893,144,0	1/1:12,14:31:75.25:4155,75,0	1/1:9,11:21:60.21:3657,60,0	1/1:15,15:32:93.32:5278,93,0	1/1:20,11:36:90.31:5012,90,0	1/1:18,18:40:99:5857,102,0	1/1:14,18:34:93.32:5521,93,0	1/1:7,7:17:42.14:2475,42,0	1/1:5,6:11:33.11:1852,33,0	1/1:14,10:25:72.25:3562,72,0	1/1:17,14:38:99:4811,102,0	1/1:8,4:17:27.09:1660,27,0	1/1:9,9:23:45.15:2558,45,0	1/1:7,13:25:54.19:3332,54,0	1/1:8,4:15:30.10:1410,30,0	1/1:8,18:31:75.26:4597,75,0	0/0:30,0:30:90.30:0,90,3339	0/0:37,0:37:99:0,108,4049	0/0:23,0:23:63.16:0,63,2212
chr10	6935808	.	CA	C	13991.25	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=16.322;DP=803;FS=4.621;HRun=2;HaplotypeScore=82.9368;InbreedingCoeff=0.9976;MQ=85.10;MQ0=0;MQRankSum=-3.898;QD=36.15;ReadPosRankSum=3.264;VQSLOD=5.5457;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,138,2065	1/1:1,8:9:24.08:307,24,0	0/0:28,0:28:81.26:0,81,1180	0/0:32,0:32:86.57:0,87,1228	1/1:1,27:28:78.25:1012,78,0	0/0:28,0:28:84.28:0,84,1241	0/0:48,0:48:99:0,135,1953	1/1:1,28:29:84.27:1090,84,0	0/0:27,0:27:78.26:0,78,1148	1/1:0,29:29:87.28:1124,87,0	1/1:0,19:19:48.15:611,48,0	1/1:0,17:17:48.16:623,48,0	1/1:0,36:36:96.31:1247,96,0	1/1:0,27:27:78.25:1013,78,0	1/1:0,29:29:84.27:1091,84,0	0/0:32,0:32:90.29:0,90,1324	0/0:27,0:27:75.24:0,75,1104	1/1:1,22:23:63.20:814,63,0	0/0:26,0:26:72.24:0,72,1078	0/0:23,0:23:69.22:0,69,1012	1/1:1,39:40:99:1441,111,0	1/1:0,23:23:66.21:853,66,0	1/1:0,25:25:63.09:818,63,0	1/1:0,53:53:99:1948,150,0	0/0:22,0:22:66.22:0,66,989	0/0:36,1:37:69.40:0,69,1533	0/0:35,0:35:99:0,105,1568	0/0:5,0:5:15.05:0,15,225
chr10	6938782	.	T	TA	2999.49	PASS	AB=0.800;AC=24;AF=0.429;AN=56;BaseQRankSum=-5.471;DP=388;FS=3.262;HRun=11;HaplotypeScore=39.9016;InbreedingCoeff=0.8036;MQ=62.68;MQ0=10;MQRankSum=0.396;QD=15.62;ReadPosRankSum=1.738;VQSLOD=4.0216;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,19:22:48.10:487,48,0	0/0:5,0:5:14.94:0,15,114	0/0:6,0:6:10.07:0,10,72	0/0:6,0:5:8.21:0,8,66	0/0:15,0:15:41.82:0,42,323	1/1:4,13:16:39.08:396,39,0	1/1:0,8:8:21.04:213,21,0	0/0:35,0:24:56.75:0,57,441	1/1:1,5:6:9.02:91,9,0	0/0:21,0:22:49.85:0,50,377	0/0:20,0:20:41.79:0,42,325	0/0:15,0:15:32.85:0,33,255	0/0:11,0:10:29.86:0,30,227	0/0:11,0:10:23.86:0,24,182	0/0:8,0:8:14.90:0,15,110	0/1:2,4:6:11.21:79,0,11	1/1:6,17:23:4.63:407,5,0	0/0:27,0:27:62.67:0,63,483	1/1:2,10:12:9.87:281,10,0	1/1:7,16:22:27.79:442,28,0	0/0:7,0:7:14.92:0,15,114	0/0:4,0:3:5.97:0,6,46	0/1:9,0:9:2.98:3,0,118	0/0:4,0:4:11.95:0,12,93	1/1:1,13:14:24.34:324,24,0	1/1:8,0:18:29.69:166,30,0	1/1:4,0:13:14.33:77,14,0	1/1:2,0:19:48.29:244,48,0
chr10	6939779	.	GGTCA	G	1602.54	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.760;DP=737;FS=0.664;HRun=0;HaplotypeScore=121.8705;InbreedingCoeff=0.9688;MQ=82.94;MQ0=0;MQRankSum=-4.904;QD=35.61;ReadPosRankSum=1.111;VQSLOD=3.9289;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,39:44:99:1697,99,0	0/0:8,0:8:15.05:0,15,347	0/0:19,0:19:42.14:0,42,849	0/0:33,0:31:50.85:0,51,961	0/0:19,0:19:48.16:0,48,1202	0/0:26,0:26:69.22:0,69,1679	0/0:36,0:36:99:0,105,2626	0/0:22,0:22:48.16:0,48,1195	0/0:26,0:26:72.25:0,72,1710	0/0:28,0:28:78.27:0,78,1937	0/0:15,0:15:36.12:0,36,874	0/0:38,0:38:87.30:0,87,2151	0/0:24,0:24:63.22:0,63,1565	0/0:28,0:28:81.28:0,81,1996	0/0:45,0:45:99:0,114,2746	0/0:24,0:24:63.22:0,63,1554	0/0:28,0:28:81.28:0,81,2039	0/0:8,0:8:15.05:0,15,378	0/0:19,0:19:42.14:0,42,1028	0/0:36,0:36:96.32:0,96,2301	0/0:28,0:28:69.24:0,69,1705	0/0:33,0:33:81.26:0,81,1982	0/0:22,0:22:51.18:0,51,1282	0/0:43,0:43:99:0,117,2891	0/0:24,0:24:69.24:0,69,1725	0/0:20,0:20:45.15:0,45,1106	0/0:28,0:28:75.26:0,75,1793	0/0:12,0:12:30.10:0,30,746
chr10	6940130	.	G	GT	5352.21	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-11.628;DP=732;FS=0.744;HRun=2;HaplotypeScore=70.8918;InbreedingCoeff=0.9991;MQ=91.55;MQ0=0;MQRankSum=-2.415;QD=38.78;ReadPosRankSum=2.318;VQSLOD=5.4723;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,126,1533	0/0:12,0:12:36.11:0,36,445	0/0:34,0:34:90.21:0,90,1056	0/0:24,0:24:57.15:0,57,682	0/0:28,0:28:78.24:0,78,966	0/0:26,0:26:78.24:0,78,965	0/0:29,0:29:81.25:0,81,1003	0/0:38,0:38:99:0,99,1227	0/0:19,0:19:54.17:0,54,669	0/0:20,0:20:57.18:0,57,705	0/0:14,0:14:42.12:0,42,508	1/1:1,20:21:57.19:821,57,0	1/1:0,21:21:60.20:864,60,0	1/1:1,13:14:39.13:561,39,0	0/0:40,0:40:99:0,117,1449	0/0:30,0:30:87.25:0,87,1053	0/0:34,0:34:99:0,99,1227	0/0:21,0:21:60.19:0,60,744	0/0:25,0:25:75.22:0,75,916	0/0:28,0:28:81.25:0,81,1004	0/0:41,0:41:99:0,123,1524	1/1:2,25:27:72.24:1033,72,0	1/1:3,21:24:60.02:863,60,0	1/1:1,30:31:84.28:1210,84,0	0/0:18,0:18:51.16:0,51,632	0/0:33,0:33:96.30:0,96,1189	0/0:28,0:28:84.26:0,84,1041	0/0:8,0:8:21.07:0,21,260
chr10	6942655	.	TAG	T	2277.01	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-6.565;DP=729;FS=1.685;HRun=0;HaplotypeScore=128.4824;InbreedingCoeff=0.9959;MQ=76.06;MQ0=0;MQRankSum=0.188;QD=36.73;ReadPosRankSum=2.038;VQSLOD=5.7563;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,120,1997	0/0:6,0:6:18.06:0,18,324	0/0:22,0:22:60.21:0,60,1071	0/0:16,0:16:42.14:0,42,700	0/0:14,0:14:39.12:0,39,673	0/0:22,0:22:53.92:0,54,930	0/0:25,0:25:72.23:0,72,1260	0/0:40,0:40:99:0,108,1785	0/0:26,0:26:69.24:0,69,1229	0/0:35,0:35:87.29:0,87,1539	0/0:12,0:12:27.09:0,27,486	0/0:30,0:30:90.31:0,90,1587	0/0:33,0:33:96.33:0,96,1706	0/0:33,0:33:96.33:0,96,1722	0/0:59,0:59:99:0,169,2956	0/0:38,0:38:99:0,111,1999	0/0:24,0:24:66.19:0,66,1128	0/0:28,0:27:75.19:0,75,1247	0/0:24,0:24:69.21:0,69,1185	0/0:18,0:18:51.16:0,51,889	0/0:33,0:33:90.24:0,90,1515	0/0:14,0:14:36.12:0,36,648	0/0:18,0:18:48.16:0,48,854	0/0:42,0:42:99:0,120,2082	0/0:12,0:12:33.11:0,33,589	1/1:2,24:26:72.19:954,72,0	1/1:1,27:28:81.27:1130,81,0	1/1:0,8:8:24.08:336,24,0
chr10	6944059	.	CT	C	7425.18	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=9.415;DP=535;FS=6.331;HRun=4;HaplotypeScore=54.8068;InbreedingCoeff=0.9991;MQ=92.22;MQ0=0;MQRankSum=-5.994;QD=31.46;ReadPosRankSum=3.024;VQSLOD=5.2357;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:90.28:0,90,1239	1/1:1,7:8:21.06:252,21,0	0/0:22,0:22:57.14:0,57,756	0/0:22,0:22:53.35:0,53,684	1/1:0,15:15:42.13:504,42,0	0/0:28,0:28:84.27:0,84,1161	0/0:16,0:16:45.12:0,45,596	1/1:1,23:24:69.20:817,69,0	0/0:10,0:10:27.08:0,27,362	1/1:1,19:20:57.16:674,57,0	1/1:0,14:14:33.06:380,33,0	1/1:0,10:10:30.09:360,30,0	1/1:0,16:16:48.15:575,48,0	1/1:1,17:18:45.14:540,45,0	1/1:0,21:21:54.17:648,54,0	0/0:29,0:29:87.28:0,87,1203	0/0:21,0:21:60.20:0,60,839	1/1:1,21:22:54.17:648,54,0	0/0:18,0:18:48.15:0,48,656	0/0:17,0:17:51.13:0,51,691	1/1:1,26:27:60.18:717,60,0	1/1:0,13:13:36.07:416,36,0	1/1:0,14:14:36.11:427,36,0	1/1:0,14:14:39.12:468,39,0	0/0:18,0:18:54.16:0,54,726	0/0:23,1:24:33.23:0,33,888	0/0:31,0:31:90.26:0,90,1207	0/0:13,0:13:39.12:0,39,529
chr10	6945055	.	GGTGTGTGTGTGTGTGTGTGT	G	6594.41	PASS	AB=0.929;AC=33;AF=0.750;AN=44;BaseQRankSum=2.968;DP=497;FS=3.115;HRun=0;HaplotypeScore=258.5860;InbreedingCoeff=0.4786;MQ=56.73;MQ0=18;MQRankSum=-2.053;QD=19.23;ReadPosRankSum=0.823;VQSLOD=3.2296;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:15.02:0,15,206	1/1:4,3:7:9.03:355,9,0	./.	0/0:32,0:18:9.02:0,9,236	0/1:12,1:14:0:0,0,0	1/1:23,0:22:6.02:279,6,0	0/1:16,0:16:0:0,0,0	1/1:23,3:26:9.03:224,9,0	1/1:19,0:18:12.04:560,12,0	1/1:10,8:20:27.07:1213,27,0	1/1:8,1:10:6.02:170,6,0	1/1:12,1:15:6:183,6,0	1/1:12,9:21:12.04:633,12,0	./.	0/0:11,6:18:3:0,3,25	1/1:25,0:25:6.02:281,6,0	./.	0/1:19,1:18:57.21:276,0,57	0/0:8,0:8:3.01:0,3,228	1/1:23,0:22:6.02:274,6,0	1/1:21,0:19:3:25,3,0	./.	./.	1/1:16,2:17:2.80:23,3,0	1/1:29,0:29:18.06:762,18,0	1/1:11,5:19:24.08:882,24,0	1/1:11,4:14:9.03:453,9,0	./.
chr10	6945073	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAGAGAGAGAGA	T	5205.93	PASS	AB=1.000;AC=16;AF=0.308;AN=52;BaseQRankSum=4.312;DP=427;FS=6.759;HRun=0;HaplotypeScore=334.4797;InbreedingCoeff=0.4115;MQ=41.15;MQ0=33;MQRankSum=-5.829;QD=28.45;ReadPosRankSum=6.376;VQSLOD=2.1245;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:16.56:0,17,1031	0/1:4,0:4:10.22:10,0,149	0/0:10,0:2:5.60:0,6,38	0/0:20,0:6:15.05:0,15,883	0/0:13,0:13:8.66:0,9,98	1/1:8,14:21:6.02:649,6,0	1/1:11,0:10:6.02:126,6,0	0/0:11,0:11:27.09:0,27,759	1/1:10,9:19:12.04:1234,12,0	0/1:21,0:20:46.54:47,0,2469	0/0:10,0:10:16.12:0,16,1187	0/0:10,0:10:0.65:0,1,529	0/1:15,0:15:18.34:18,0,359	0/0:9,0:9:0.89:0,1,2	0/0:16,0:15:12.50:0,12,566	1/1:11,13:22:5.57:632,6,0	./.	0/0:18,0:15:47.78:0,48,1836	0/0:6,0:6:3.01:0,3,459	1/1:13,9:20:6.02:600,6,0	0/0:24,0:16:20.21:0,20,898	0/0:10,0:8:6.49:0,6,192	0/0:12,0:10:0:0,0,0	0/0:14,0:13:9.50:0,10,504	1/1:9,22:31:18.06:1872,18,0	0/0:20,0:20:25.09:0,25,3024	0/1:13,0:12:17.82:18,0,917	./.
chr10	6945103	.	TGAGAGA	T	809.03	PASS	AB=0.889;AC=16;AF=0.308;AN=52;BaseQRankSum=7.173;DP=510;FS=16.666;HRun=0;HaplotypeScore=177.1407;InbreedingCoeff=0.6477;MQ=41.58;MQ0=20;MQRankSum=-4.613;QD=5.22;ReadPosRankSum=4.480;VQSLOD=1.5305;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:13,12:25:0:0,0,0	0/0:10,0:10:9.03:0,9,224	./.	./.	0/0:18,0:17:5.85:0,6,134	1/1:17,0:16:6.02:84,6,0	1/1:5,0:14:5.03:97,5,0	0/0:24,0:24:32.07:0,32,593	1/1:11,0:12:10.28:128,10,0	0/0:31,0:30:51.78:0,52,1075	0/0:16,0:16:18.05:0,18,430	0/0:16,0:16:5.63:0,6,549	0/0:24,0:23:32.69:0,33,653	0/0:17,0:17:17.89:0,18,324	0/0:21,0:20:23.62:0,24,609	1/1:16,0:17:8.76:113,9,0	1/1:20,0:21:7.47:92,7,0	0/0:18,0:17:33.06:0,33,718	0/1:10,0:14:23.29:157,0,23	1/1:11,0:10:3.38:44,3,0	0/0:20,0:13:9.03:0,9,208	0/0:24,0:21:21.05:0,21,388	0/1:18,0:17:0.35:0,0,352	0/0:26,0:26:18.05:0,18,373	1/1:25,0:25:18.06:258,18,0	0/0:29,0:28:63.02:0,63,1296	0/0:30,0:29:49.47:0,49,917	0/0:3,0:1:0.89:0,1,2
chr10	6946011	.	TG	T	6553.96	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=-3.893;DP=502;FS=7.739;HRun=9;HaplotypeScore=60.3901;InbreedingCoeff=0.8948;MQ=71.43;MQ0=0;MQRankSum=-2.667;QD=23.00;ReadPosRankSum=4.397;VQSLOD=5.5588;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:78.05:0,78,869	1/1:1,6:7:15.01:137,15,0	0/0:17,0:18:44.81:0,45,461	0/1:10,0:10:25.02:25,0,126	1/1:2,17:20:53.05:473,53,0	0/0:5,0:15:28.36:0,28,143	0/0:6,0:23:48.66:0,49,286	1/1:2,26:28:75.02:680,75,0	0/0:2,0:4:5.68:0,6,29	1/1:1,27:28:81.02:736,81,0	1/1:0,14:14:42.02:384,42,0	1/1:2,27:29:75.04:686,75,0	1/1:2,14:16:36.01:329,36,0	1/1:0,14:14:36.02:329,36,0	1/1:1,24:25:63.03:577,63,0	0/0:2,0:15:34.09:0,34,173	0/0:1,0:28:71.02:0,71,361	1/1:0,24:24:60.03:549,60,0	0/0:4,1:16:7.25:0,7,155	0/0:2,0:12:31.40:0,31,170	1/1:0,23:23:63.03:577,63,0	1/1:1,9:10:27.01:247,27,0	1/1:0,10:10:24.01:220,24,0	1/1:4,23:27:66.03:604,66,0	0/0:4,0:13:25.73:0,26,150	0/0:16,0:16:38.94:0,39,420	0/0:22,0:22:66.16:0,66,739	0/0:4,0:4:12.02:0,12,127
chr10	6946425	.	CT	C	8695.40	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=9.114;DP=379;FS=0.890;HRun=2;HaplotypeScore=39.0288;InbreedingCoeff=0.9931;MQ=90.38;MQ0=0;MQRankSum=-3.691;QD=37.32;ReadPosRankSum=1.362;VQSLOD=4.9190;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,13:13:39.13:506,39,0	1/1:0,12:12:33.11:428,33,0	0/0:20,0:20:58.26:0,58,789	0/0:9,0:9:21.07:0,21,315	1/1:0,7:7:21.07:273,21,0	0/0:13,0:13:39.13:0,39,585	0/0:8,0:8:24.08:0,24,360	1/1:1,23:24:69.21:882,69,0	0/0:15,0:15:45.15:0,45,673	1/1:0,11:11:33.11:427,33,0	1/1:0,14:14:42.14:545,42,0	1/1:0,14:14:42.14:545,42,0	1/1:0,12:12:33.11:428,33,0	1/1:0,13:13:36.12:468,36,0	1/1:0,8:8:24.08:312,24,0	0/0:17,0:17:51.17:0,51,764	0/0:22,0:22:63.21:0,63,944	1/1:0,21:21:63.20:818,63,0	0/0:19,0:19:57.18:0,57,835	0/0:14,0:14:42.14:0,42,628	1/1:0,12:12:36.12:468,36,0	1/1:0,11:11:33.11:429,33,0	1/1:0,14:14:36.12:467,36,0	1/1:0,9:9:27.09:351,27,0	0/0:9,0:9:27.07:0,27,383	1/1:0,19:19:57.17:725,57,0	1/1:0,12:12:36.12:467,36,0	1/1:0,7:7:12.04:156,12,0
chr10	6946945	.	T	TA	7336.57	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-15.945;DP=620;FS=0.318;HRun=6;HaplotypeScore=55.1231;InbreedingCoeff=0.9882;MQ=79.86;MQ0=0;MQRankSum=-2.053;QD=33.05;ReadPosRankSum=1.713;VQSLOD=5.0224;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,18:19:57.18:715,57,0	0/0:9,0:9:27.06:0,27,275	0/0:16,0:16:14.42:0,14,323	0/0:13,0:14:9.29:0,9,209	0/0:25,0:25:60.06:0,60,594	1/1:4,23:27:66.21:830,66,0	1/1:1,26:27:66.21:830,66,0	0/0:33,0:33:87.16:0,87,865	1/1:3,11:14:27.09:340,27,0	0/0:33,0:33:84.16:0,84,844	0/0:24,0:24:62.73:0,63,621	0/0:16,0:16:45.07:0,45,446	0/0:16,0:16:39.08:0,39,398	0/0:21,0:21:57.11:0,57,574	0/0:19,0:19:57.13:0,57,581	1/1:0,22:22:63.20:793,63,0	1/1:0,27:27:75.24:944,75,0	0/0:20,0:20:57.10:0,57,572	1/1:4,19:23:57.18:716,57,0	1/1:3,34:37:99:1226,99,0	0/0:17,0:17:51.08:0,51,505	0/0:26,0:26:78.17:0,78,790	0/0:21,0:21:57.13:0,57,581	0/0:14,0:14:36.05:0,36,354	1/1:1,25:26:75.24:944,75,0	0/0:27,0:27:78.17:0,78,791	0/0:32,0:32:84.19:0,84,857	0/0:15,0:15:45.10:0,45,458
chr10	6947958	.	G	GT	12688.90	PASS	AB=0.565;AC=51;AF=0.911;AN=56;BaseQRankSum=-4.718;DP=560;FS=2.401;HRun=10;HaplotypeScore=54.2267;InbreedingCoeff=0.7111;MQ=69.02;MQ0=1;MQRankSum=-0.756;QD=23.28;ReadPosRankSum=1.712;VQSLOD=5.7035;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,0:10:22.73:114,23,0	1/1:1,11:12:30.08:320,30,0	0/0:6,0:5:5.99:0,6,49	0/0:8,0:9:5.02:0,5,30	1/1:4,27:31:44.53:679,45,0	1/1:3,24:27:69.17:736,69,0	1/1:3,14:18:41.94:430,42,0	1/1:14,33:47:54.22:975,54,0	1/1:5,21:26:38.51:615,39,0	1/1:3,24:27:50.54:738,51,0	1/1:1,17:18:48.12:512,48,0	1/1:0,12:12:33.08:352,33,0	1/1:0,20:20:57.14:607,57,0	1/1:4,14:19:41.92:422,42,0	1/1:3,17:20:48.12:512,48,0	1/1:3,14:17:39.98:418,40,0	1/1:3,22:25:39.10:416,39,0	1/1:8,26:34:44.92:678,45,0	1/1:2,13:15:40.65:419,41,0	1/1:4,24:28:41.52:646,42,0	1/1:2,12:14:30.08:320,30,0	0/1:3,9:13:0.73:158,0,1	1/1:2,15:17:36.09:384,36,0	1/1:2,7:9:18.05:192,18,0	1/1:3,13:16:8.44:295,8,0	1/1:5,24:29:72.12:746,72,0	1/1:3,27:31:72:750,72,0	1/1:2,7:9:24.06:255,24,0
chr10	6948494	.	C	CA	26153.09	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=1.167;DP=758;FS=3.293;HRun=1;HaplotypeScore=117.2364;InbreedingCoeff=0.9790;MQ=84.22;MQ0=0;MQRankSum=-4.879;QD=43.95;ReadPosRankSum=1.700;VQSLOD=4.3824;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,102,1422	1/1:1,3:4:6.02:96,6,0	0/0:28,0:28:78.23:0,78,1021	0/0:18,0:18:47.87:0,48,580	1/1:0,19:19:57.19:911,57,0	1/1:0,24:24:60.20:959,60,0	1/1:1,24:25:66.22:1055,66,0	1/1:1,39:40:99:1847,117,0	1/1:0,28:28:75.26:1199,75,0	1/1:0,40:40:99:1919,120,0	1/1:0,18:18:51.17:815,51,0	1/1:1,35:36:99:1678,105,0	1/1:0,22:22:66.23:1053,66,0	1/1:0,49:49:99:2204,138,0	1/1:1,22:23:60.20:959,60,0	1/1:0,30:30:78.27:1247,78,0	1/1:2,19:21:54.18:863,54,0	1/1:1,21:22:63.21:1007,63,0	1/1:1,26:27:78.24:1198,78,0	1/1:0,21:21:60.20:959,60,0	1/1:1,54:55:99:2494,157,0	1/1:1,19:20:54.18:862,54,0	1/1:1,15:16:36.12:576,36,0	1/1:1,40:41:99:1583,99,0	1/1:0,14:14:42.14:671,42,0	0/0:44,1:45:87.44:0,87,1767	0/0:26,0:26:75.25:0,75,1049	0/0:12,0:12:36.12:0,36,503
chr10	6949547	.	ATTACGCTTATAAGTGTTTCAAC	A	2048.19	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.825;DP=723;FS=0.000;HRun=0;HaplotypeScore=408.8582;InbreedingCoeff=0.9963;MQ=85.42;MQ0=0;MQRankSum=-5.877;QD=146.30;ReadPosRankSum=1.397;VQSLOD=2.7844;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,14:14:36.12:2143,36,0	0/0:10,0:10:30.08:0,30,2203	0/0:22,0:22:63.22:0,63,3299	0/0:24,0:24:69.20:0,69,3951	0/0:28,0:28:81.28:0,81,7238	0/0:24,0:24:72.25:0,72,7006	0/0:34,0:34:99:0,102,8728	0/0:31,0:31:87.29:0,87,6028	0/0:24,0:24:72.25:0,72,7452	0/0:30,0:30:90.29:0,90,8348	0/0:21,0:21:63.22:0,63,4810	0/0:40,0:40:99:0,117,10876	0/0:27,0:27:81.28:0,81,7715	0/0:43,0:43:99:0,129,12026	0/0:28,0:28:84.26:0,84,7545	0/0:24,0:23:72.25:0,72,6538	0/0:54,0:54:99:0,163,15104	0/0:27,0:27:78.23:0,78,7128	0/0:25,0:25:75.26:0,75,5966	0/0:15,0:15:45.15:0,45,4322	0/0:35,0:35:99:0,105,9590	0/0:26,0:26:78.25:0,78,7371	0/0:9,0:9:27.09:0,27,2740	0/0:31,0:31:93.30:0,93,8203	0/0:17,0:17:51.13:0,51,4499	0/0:26,0:26:78.27:0,78,7327	0/0:26,0:26:78.25:0,78,6757	0/0:8,0:8:24.08:0,24,1886
chr10	6949974	.	AT	A	4049.51	PASS	AB=0.621;AC=51;AF=0.911;AN=56;BaseQRankSum=-1.204;DP=466;FS=2.058;HRun=2;HaplotypeScore=77.2681;InbreedingCoeff=0.3996;MQ=80.39;MQ0=1;MQRankSum=-5.316;QD=9.06;ReadPosRankSum=3.272;VQSLOD=1.5846;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:21,2:23:32.35:238,32,0	1/1:7,0:7:2.99:25,3,0	0/0:18,0:18:7.50:0,8,242	0/1:14,3:16:20.96:21,0,184	1/1:21,0:21:20.70:145,21,0	1/1:17,3:20:26.92:214,27,0	1/1:21,2:23:38.90:311,39,0	1/1:13,0:13:15:133,15,0	1/1:17,5:22:50.84:402,51,0	1/1:8,1:9:17.95:144,18,0	1/1:11,2:13:5.65:42,6,0	0/1:1,17:18:0:0,0,0	1/1:14,0:14:5.95:46,6,0	0/1:0,11:12:0:0,0,0	1/1:21,3:24:47.85:385,48,0	1/1:19,3:22:26.79:220,27,0	1/1:27,2:28:32.86:255,33,0	1/1:17,6:23:23.97:197,24,0	1/1:8,1:9:23.89:189,24,0	1/1:8,3:11:14.89:108,15,0	1/1:23,1:24:29.97:251,30,0	1/1:0,14:14:8.94:92,9,0	1/1:9,0:9:11.97:96,12,0	1/1:20,3:23:22.23:205,22,0	1/1:15,0:15:17.93:139,18,0	1/1:11,3:14:17.94:144,18,0	1/1:9,1:9:1.81:9,2,0	1/1:0,8:8:3:38,3,0
chr10	6949975	.	TTGG	T	5630.91	PASS	AB=1.000;AC=41;AF=0.732;AN=56;BaseQRankSum=1.363;DP=483;FS=41.204;HRun=0;HaplotypeScore=82.4625;InbreedingCoeff=0.6106;MQ=78.39;MQ0=1;MQRankSum=-3.745;QD=14.40;ReadPosRankSum=6.518;VQSLOD=2.7216;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:19,2:22:8.18:269,8,0	1/1:0,0:7:2.89:16,3,0	0/0:17,0:16:7.57:0,8,303	0/0:16,0:15:25.67:0,26,312	1/1:1,1:20:20.34:158,20,0	1/1:3,16:19:27.09:488,27,0	1/1:3,17:23:39.12:633,39,0	1/1:11,0:13:15.32:125,15,0	1/1:12,9:22:51.15:840,51,0	1/1:1,0:9:17.86:135,18,0	1/1:3,9:13:5.43:33,5,0	0/0:20,0:20:8.95:0,9,87	0/1:16,0:16:34.02:34,0,76	0/0:15,0:15:9.03:0,9,125	1/1:20,1:25:46.22:344,46,0	1/1:3,18:22:27.09:470,27,0	1/1:2,24:28:33.01:553,33,0	1/1:6,1:22:23.22:164,23,0	1/1:1,8:9:24.01:280,24,0	1/1:3,8:11:14.95:198,15,0	1/1:22,1:24:29.85:242,30,0	0/1:17,0:17:6.54:7,0,48	1/1:10,0:10:11.97:96,12,0	0/1:28,0:28:99:107,0,214	1/1:0,14:15:18.06:303,18,0	1/1:5,0:15:17.44:135,17,0	0/0:15,0:15:13.53:0,14,246	0/0:9,0:9:5.05:0,5,50
chr10	6950582	.	T	TG	20330.06	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-12.464;DP=630;FS=9.206;HRun=1;HaplotypeScore=55.2579;InbreedingCoeff=0.9854;MQ=66.23;MQ0=1;MQRankSum=3.962;QD=41.41;ReadPosRankSum=3.476;VQSLOD=4.9625;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,108,1402	1/1:0,6:6:18.06:270,18,0	0/0:31,0:29:71.39:0,71,920	0/0:24,0:20:57.13:0,57,696	1/1:0,15:15:45.15:669,45,0	1/1:2,25:27:66.22:989,66,0	1/1:0,29:29:84.28:1259,84,0	1/1:0,19:19:57.19:853,57,0	1/1:0,19:19:51.17:764,51,0	1/1:0,16:16:48.16:715,48,0	1/1:0,15:15:45.15:673,45,0	1/1:0,37:37:99:1617,108,0	1/1:0,25:25:72.24:1078,72,0	1/1:2,34:36:99:1482,99,0	1/1:2,18:20:54.18:794,54,0	1/1:0,26:26:72.24:1079,72,0	1/1:0,31:31:90.30:1347,90,0	1/1:0,43:43:99:1843,123,0	1/1:1,17:18:51.13:702,51,0	1/1:0,15:15:39.13:583,39,0	1/1:2,23:25:63.21:942,63,0	1/1:0,9:9:27.09:404,27,0	1/1:0,11:11:24.08:360,24,0	1/1:0,33:33:90.26:1324,90,0	1/1:0,16:16:39.13:584,39,0	0/0:17,1:18:9.19:0,9,605	0/0:20,0:20:60.20:0,60,779	0/0:8,0:8:21.07:0,21,273
chr10	6951784	.	CTG	C	7244.78	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=8.730;DP=660;FS=5.719;HRun=0;HaplotypeScore=109.1248;InbreedingCoeff=0.9997;MQ=75.67;MQ0=0;MQRankSum=-0.660;QD=43.38;ReadPosRankSum=2.924;VQSLOD=6.2929;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,111,2141	0/0:9,0:9:27.08:0,27,488	0/0:15,0:15:42.14:0,42,701	0/0:16,0:16:38.83:0,39,568	0/0:22,0:22:66.23:0,66,1273	1/1:0,27:27:78.26:1194,78,0	1/1:1,15:16:45.15:685,45,0	0/0:32,0:32:90.25:0,90,1626	1/1:0,18:18:45.15:689,45,0	0/0:31,0:31:90.31:0,90,1734	0/0:14,0:14:39.13:0,39,740	0/0:37,0:37:99:0,105,2023	0/0:34,0:34:85.94:0,86,1666	0/0:18,0:18:54.19:0,54,1041	0/0:27,0:27:78.25:0,78,1468	1/1:0,28:28:81.28:1240,81,0	1/1:1,31:32:87.30:1332,87,0	0/0:26,0:26:78.27:0,78,1495	1/1:0,14:14:42.14:641,42,0	1/1:0,13:13:39.13:597,39,0	0/0:35,0:35:96.32:0,96,1833	0/0:33,0:33:96.33:0,96,1848	0/0:24,0:24:60.21:0,60,1148	0/0:25,0:25:69.24:0,69,1332	1/1:0,18:19:57.19:866,57,0	0/0:26,0:26:78.27:0,78,1507	0/0:22,0:22:63.22:0,63,1217	0/0:10,0:10:30.10:0,30,580
chr10	6951839	.	A	AGGG	17412.14	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-17.512;DP=661;FS=6.980;HRun=5;HaplotypeScore=114.5810;InbreedingCoeff=0.9997;MQ=82.05;MQ0=0;MQRankSum=-2.209;QD=50.76;ReadPosRankSum=2.774;VQSLOD=3.8074;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:87.29:0,87,1281	1/1:1,10:11:24.08:523,24,0	0/0:22,0:22:49.68:0,50,680	0/0:20,0:20:39.04:0,39,488	1/1:1,17:18:42.14:873,42,0	0/0:23,0:23:63.20:0,63,906	0/0:16,0:16:39.12:0,39,575	1/1:9,20:31:78.21:1437,78,0	0/0:25,0:25:69.23:0,69,1017	1/1:3,27:30:78.25:1660,78,0	1/1:2,18:20:45.15:981,45,0	1/1:4,20:25:54.19:1168,54,0	1/1:2,28:33:72.25:1569,72,0	1/1:1,19:20:60.21:1296,60,0	1/1:1,31:35:84.29:1833,84,0	0/0:26,0:26:75.23:0,75,1068	0/0:31,0:31:75.24:0,75,1106	1/1:1,31:32:93.32:2002,93,0	0/0:15,0:15:45.15:0,45,663	0/0:18,0:18:54.18:0,54,794	1/1:6,18:24:57.15:1175,57,0	1/1:5,19:24:51.17:1069,51,0	1/1:3,20:23:51.18:1095,51,0	1/1:2,15:17:35.12:731,35,0	0/0:25,0:25:72.22:0,72,1038	0/0:29,0:29:84.28:0,84,1237	0/0:23,0:23:66.21:0,66,953	0/0:14,0:14:42.14:0,42,619
chr10	6952248	.	A	AGTTTGTTT	5920.18	PASS	AB=1.000;AC=25;AF=0.446;AN=56;BaseQRankSum=-6.417;DP=653;FS=12.599;HRun=0;HaplotypeScore=294.7424;InbreedingCoeff=-0.5166;MQ=57.37;MQ0=0;MQRankSum=1.718;QD=10.90;ReadPosRankSum=1.255;VQSLOD=2.2338;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:12,26:38:72.15:2681,72,0	0/1:8,0:8:16.97:17,0,115	0/0:18,0:17:23.23:0,23,537	0/0:13,0:10:24.06:0,24,468	0/1:26,0:26:99:410,0,151	0/1:14,0:14:33.98:60,0,34	0/1:25,0:25:61.21:230,0,61	0/1:15,0:15:27.03:106,0,27	0/1:20,0:20:28.25:40,0,28	0/1:37,0:36:99:410,0,208	0/1:22,0:22:99:197,0,259	0/1:24,0:24:99:172,0,319	0/1:27,0:27:99:120,0,310	0/1:23,0:23:99:113,0,311	0/1:39,0:39:99:341,0,418	1/1:35,0:35:21.65:48,22,0	0/1:27,0:27:67.97:83,0,68	0/1:10,0:10:48.33:176,0,48	0/1:22,0:22:27:27,0,128	0/1:27,0:27:27.74:62,0,28	0/1:16,0:16:71.86:151,0,72	0/1:18,0:18:99:219,0,169	0/1:27,0:27:99:149,0,285	0/1:18,0:18:80:80,0,135	0/1:25,0:25:27.89:28,0,166	0/0:25,0:25:48.07:0,48,972	0/0:23,0:23:63.13:0,63,1245	0/0:31,0:31:81.18:0,81,1701
chr10	6952261	.	G	GTTTC	8081.85	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=-13.009;DP=675;FS=1.824;HRun=0;HaplotypeScore=264.8971;InbreedingCoeff=0.8929;MQ=49.76;MQ0=0;MQRankSum=6.311;QD=33.82;ReadPosRankSum=3.732;VQSLOD=4.8841;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:36,0:36:56.66:519,0,57	0/0:3,0:9:18.02:0,18,168	0/0:14,0:13:17.19:0,17,255	0/0:15,0:12:23.23:0,23,352	0/0:14,0:29:35.82:0,36,303	1/1:2,14:16:24.08:597,24,0	1/1:5,18:24:33.11:799,33,0	0/0:16,0:19:29.69:0,30,216	1/1:1,21:22:39.13:974,39,0	0/0:21,0:36:59.92:0,60,528	0/0:9,0:23:41.98:0,42,378	0/0:13,0:32:68.71:0,69,583	0/0:11,0:26:53.89:0,54,474	0/0:8,0:24:53.92:0,54,482	0/0:13,0:37:72:0,72,660	1/1:3,31:35:54.17:1347,54,0	1/1:2,28:31:39.13:974,39,0	0/0:10,0:12:6.01:0,6,56	1/1:2,16:18:47.97:757,48,0	1/1:3,24:31:53.87:1065,54,0	0/0:10,0:16:14.89:0,15,120	0/0:9,0:19:27.03:0,27,252	0/0:11,0:26:50.89:0,51,449	0/0:8,0:20:32.08:0,32,265	1/1:5,19:26:42.14:1049,42,0	0/0:20,0:21:54.09:0,54,679	0/0:27,0:27:71.69:0,72,949	0/0:29,0:30:72.01:0,72,885
chr10	6953466	.	CT	C	5107.75	PASS	AB=0.707;AC=50;AF=0.893;AN=56;BaseQRankSum=-0.160;DP=575;FS=4.033;HRun=15;HaplotypeScore=84.3274;InbreedingCoeff=0.2401;MQ=67.91;MQ0=1;MQRankSum=0.177;QD=9.20;ReadPosRankSum=4.993;VQSLOD=4.4420;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:6,12:20:16.14:148,0,16	1/1:2,5:7:14.76:96,15,0	0/1:16,0:9:4.08:4,0,59	0/0:19,0:13:12.29:0,12,88	1/1:11,19:31:46.48:419,46,0	1/1:2,28:33:62.10:413,62,0	1/1:3,11:16:7.29:158,7,0	0/1:14,18:34:7.79:193,0,8	0/1:8,14:22:13.48:157,0,13	1/1:8,16:25:10.86:299,11,0	1/1:8,8:16:6.07:163,6,0	1/1:11,6:18:19.49:121,19,0	1/1:13,16:30:60.99:387,61,0	1/1:3,6:9:20.68:135,21,0	1/1:8,14:22:50.08:324,50,0	1/1:5,12:17:6.02:166,6,0	1/1:12,12:27:20.34:236,20,0	1/1:12,8:20:32.23:208,32,0	1/1:9,9:18:11.06:149,11,0	1/1:8,12:21:34.11:205,34,0	1/1:6,7:14:25.58:158,26,0	1/1:7,6:14:2.22:132,2,0	1/1:14,12:26:24.22:262,24,0	1/1:4,4:8:11.81:77,12,0	1/1:6,14:21:40.16:251,40,0	1/1:12,0:26:26.79:79,27,0	1/1:6,0:30:40.03:116,40,0	1/1:4,0:14:18.29:53,18,0
chr10	6953526	.	ATC	A	9914.21	PASS	AB=0.960;AC=29;AF=0.518;AN=56;BaseQRankSum=2.731;DP=565;FS=2.390;HRun=0;HaplotypeScore=90.0951;InbreedingCoeff=0.9285;MQ=73.74;MQ0=4;MQRankSum=-0.735;QD=30.13;ReadPosRankSum=1.721;VQSLOD=6.3450;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:42.09:0,42,683	1/1:0,11:10:30.10:412,30,0	0/0:13,0:13:18.11:0,18,465	0/0:12,0:12:27.09:0,27,438	1/1:2,29:31:60.20:821,60,0	0/0:18,0:18:51.17:0,51,900	0/0:19,0:19:54.18:0,54,927	1/1:4,41:45:99:1602,123,0	0/0:17,0:17:42.14:0,42,733	1/1:0,21:21:60.20:824,60,0	1/1:1,19:20:57.15:762,57,0	1/1:1,16:17:42.14:576,42,0	1/1:2,27:29:68.90:947,69,0	1/1:1,16:17:42.14:577,42,0	1/1:3,23:25:57.19:783,57,0	0/0:19,0:19:57.18:0,57,973	0/0:20,0:20:60.21:0,60,1041	1/1:1,14:15:36.12:494,36,0	0/0:17,0:17:48.16:0,48,809	0/0:10,0:10:27.09:0,27,467	1/1:2,21:22:54.18:742,54,0	1/1:2,18:20:48.16:659,48,0	1/1:2,16:17:29.97:412,30,0	1/1:1,11:12:21.07:288,21,0	0/0:24,0:24:66.23:0,66,1161	0/1:23,1:24:15.23:15,0,993	0/0:32,0:32:87.30:0,87,1526	0/0:20,0:20:54.18:0,54,947
chr10	6956093	.	GA	G	1032.84	PASS	AB=0.568;AC=5;AF=0.089;AN=56;BaseQRankSum=8.623;DP=656;FS=1.219;HRun=8;HaplotypeScore=82.4889;InbreedingCoeff=0.7152;MQ=61.55;MQ0=19;MQRankSum=-0.748;QD=18.44;ReadPosRankSum=2.260;VQSLOD=3.6442;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:84.24:0,84,1002	0/0:9,0:9:24.07:0,24,290	0/0:21,0:6:5.42:0,5,124	0/0:17,0:10:6.70:0,7,201	0/0:35,0:34:93.26:0,93,1101	0/0:19,0:19:51.16:0,51,616	0/0:26,0:25:57.16:0,57,676	0/0:29,0:28:72.16:0,72,823	0/0:22,0:22:48.15:0,48,579	0/0:35,0:35:96.28:0,96,1143	0/0:27,0:27:72.22:0,72,869	0/0:20,0:20:42.09:0,42,491	0/0:28,0:28:75.22:0,75,894	0/0:16,0:16:36.09:0,36,413	0/0:22,0:22:63.19:0,63,760	0/0:26,0:26:66.12:0,66,768	0/0:25,0:24:63.18:0,63,749	0/0:21,0:21:25.46:0,25,586	0/0:23,0:22:63.17:0,63,738	0/0:20,0:20:54.17:0,54,652	0/0:16,0:16:42.12:0,42,495	0/0:25,0:25:63.19:0,63,759	0/0:30,0:30:87.27:0,87,1049	0/0:23,0:23:60.18:0,60,725	0/0:32,0:31:84.21:0,84,988	0/1:5,16:21:18.40:409,0,18	1/1:2,20:22:50.93:492,51,0	1/1:2,11:13:27.04:261,27,0
chr10	6957008	.	T	TA	17484.12	PASS	AB=0.938;AC=29;AF=0.518;AN=56;BaseQRankSum=-18.427;DP=827;FS=21.900;HRun=1;HaplotypeScore=72.3939;InbreedingCoeff=0.9437;MQ=89.99;MQ0=0;MQRankSum=-4.267;QD=38.17;ReadPosRankSum=2.617;VQSLOD=3.0481;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,162,2070	1/1:1,13:14:39.13:575,39,0	0/0:33,0:33:99:0,99,1245	0/0:29,0:29:84.23:0,84,1048	1/1:1,24:25:69.23:1034,69,0	0/0:22,0:22:66.20:0,66,842	0/0:18,0:18:54.16:0,54,687	1/1:2,35:37:99:1551,105,0	0/0:35,0:35:99:0,105,1347	1/1:1,27:28:81.27:1214,81,0	1/1:0,18:18:45.15:674,45,0	1/1:2,50:52:99:2158,144,0	1/1:0,34:34:90.30:1346,90,0	1/1:1,37:38:99:1650,111,0	1/1:0,40:40:99:1707,114,0	0/0:30,0:30:90.29:0,90,1168	0/0:33,0:33:96.29:0,96,1230	1/1:0,24:24:69.23:1028,69,0	0/0:31,0:31:93.29:0,93,1192	0/0:15,0:15:45.15:0,45,584	1/1:1,45:45:99:1663,111,0	1/1:0,21:21:51.17:764,51,0	1/1:0,15:15:39.13:584,39,0	1/1:0,36:36:99:1529,102,0	0/0:21,0:21:63.20:0,63,818	0/1:28,2:30:5.69:6,0,914	0/0:23,0:23:69.19:0,69,865	0/0:25,0:25:69.22:0,69,892
chr10	6958112	.	ATAAAGTTC	A	11888.22	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=15.887;DP=745;FS=11.306;HRun=0;HaplotypeScore=222.5891;InbreedingCoeff=0.9986;MQ=71.76;MQ0=0;MQRankSum=-16.660;QD=66.41;ReadPosRankSum=1.017;VQSLOD=3.3319;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,99,4307	0/0:6,0:6:18.06:0,18,816	0/0:16,0:16:42:0,42,1555	0/0:24,0:24:69.02:0,69,2403	0/0:28,0:28:84.27:0,84,3532	1/1:0,21:21:60.21:1755,60,0	1/1:2,20:22:42.14:1225,42,0	0/0:52,0:52:99:0,154,6333	1/1:0,19:19:42.14:1226,42,0	0/0:40,0:40:99:0,117,5044	0/0:19,0:19:54.18:0,54,2346	0/0:27,0:27:78.27:0,78,3291	0/0:26,0:26:72.25:0,72,3162	0/0:32,0:32:96.26:0,96,4194	0/0:26,0:26:78.20:0,78,3416	1/1:1,27:28:57.20:1666,57,0	1/1:2,16:18:36.12:1052,36,0	0/0:25,0:25:75.22:0,75,3091	1/1:0,19:19:56.99:1186,57,0	1/1:0,27:27:69.19:1944,69,0	0/0:31,0:31:93.30:0,93,3974	0/0:30,0:30:87.30:0,87,3817	0/0:31,0:31:93.30:0,93,3923	0/0:38,0:37:99:0,111,4890	1/1:0,25:25:63.22:1834,63,0	0/0:36,0:36:99:0,108,4653	0/0:32,0:32:93.31:0,93,4000	0/0:13,0:13:39.13:0,39,1747
chr10	6958256	.	A	ATGTGT	47296.36	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-10.665;DP=845;FS=1.408;HRun=0;HaplotypeScore=137.3910;InbreedingCoeff=0.9739;MQ=83.68;MQ0=0;MQRankSum=-10.727;QD=71.02;ReadPosRankSum=2.147;VQSLOD=6.5264;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,144,2976	1/1:3,13:16:36.12:1066,36,0	0/0:27,0:27:72.23:0,72,1419	0/0:33,0:33:86.37:0,86,1625	1/1:0,27:29:78.26:2257,78,0	1/1:2,18:20:51.18:1594,51,0	1/1:10,18:29:72.25:2118,72,0	1/1:17,35:58:99:4485,157,0	1/1:6,24:32:72.25:2247,72,0	1/1:4,19:27:75.25:1958,75,0	1/1:3,18:21:54.14:1544,54,0	1/1:3,23:31:69.24:2149,69,0	1/1:2,21:24:63.22:1960,63,0	1/1:4,33:40:99:2990,99,0	1/1:3,32:37:90.31:2759,90,0	1/1:6,26:34:72.25:2183,72,0	1/1:3,28:31:69.24:2147,69,0	1/1:6,18:26:57.19:1691,57,0	1/1:4,19:25:69.24:1944,69,0	1/1:3,33:39:99:2963,99,0	1/1:8,34:45:93.03:2718,93,0	1/1:1,22:28:60.20:1810,60,0	1/1:1,15:17:42.10:1232,42,0	1/1:6,30:37:70.65:2136,71,0	1/1:6,13:20:48.12:1345,48,0	0/0:32,1:33:5.29:0,5,1875	0/0:28,0:26:75.26:0,75,1583	0/0:9,0:9:18.50:0,19,503
chr10	6958760	.	CTATGTGCCA	C	21541.86	PASS	AB=0.967;AC=30;AF=0.536;AN=56;BaseQRankSum=-2.002;DP=752;FS=1.320;HRun=0;HaplotypeScore=274.6216;InbreedingCoeff=0.8677;MQ=60.46;MQ0=0;MQRankSum=-17.548;QD=49.41;ReadPosRankSum=2.656;VQSLOD=4.4504;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,108,5161	1/1:0,20:20:48.16:1473,48,0	0/0:29,0:29:75.30:0,75,3568	0/0:28,0:28:78.26:0,78,3281	1/1:2,25:27:18.53:569,19,0	0/0:13,0:13:36.12:0,36,1090	0/0:28,0:28:81.28:0,81,2655	1/1:4,37:41:99:2926,111,0	0/1:28,1:29:10.50:10,0,2603	1/1:2,22:24:63.20:1868,63,0	1/1:0,22:22:33.11:1042,33,0	1/1:0,45:45:99:3223,102,0	1/1:3,29:32:57.20:1800,57,0	1/1:0,27:27:63.22:1989,63,0	1/1:2,34:36:66.23:2085,66,0	0/0:34,0:34:99:0,99,3119	0/0:27,0:27:78.27:0,78,2542	1/1:0,14:14:24.08:758,24,0	0/0:21,0:21:60.21:0,60,1842	0/0:29,0:29:84.13:0,84,2689	1/1:2,18:20:12.04:379,12,0	1/1:0,22:22:39.13:1232,39,0	1/1:0,21:21:32.86:1042,33,0	1/1:2,25:27:35.32:1136,35,0	0/0:19,0:19:51.18:0,51,1714	0/1:28,1:29:7.52:8,0,3977	0/0:36,0:36:99:0,108,4942	0/0:12,0:12:36.12:0,36,1642
chr10	6959506	.	CT	C	8791.73	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=11.809;DP=544;FS=1.381;HRun=9;HaplotypeScore=80.2655;InbreedingCoeff=0.9778;MQ=70.90;MQ0=5;MQRankSum=-0.797;QD=21.60;ReadPosRankSum=-0.147;VQSLOD=5.3011;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:75.20:0,75,854	1/1:2,8:10:24.01:220,24,0	0/0:19,0:11:12.89:0,13,93	0/0:12,0:7:8.98:0,9,81	1/1:2,38:40:99:986,108,0	1/1:0,19:19:54.03:494,54,0	1/1:1,16:17:39.02:357,39,0	1/1:11,29:40:86.99:786,87,0	1/1:2,14:16:33.01:302,33,0	1/1:0,20:20:60.01:543,60,0	1/1:2,21:23:54.01:491,54,0	1/1:2,10:12:30.02:275,30,0	1/1:2,12:14:30:275,30,0	1/1:4,15:19:42.01:384,42,0	1/1:0,16:16:48.03:439,48,0	1/1:2,13:15:33.01:302,33,0	1/1:2,19:21:54.03:494,54,0	1/1:2,8:10:21.01:192,21,0	1/1:5,16:20:36.01:330,36,0	1/1:2,14:16:36:329,36,0	1/1:1,14:15:39.02:357,39,0	1/1:3,7:10:15:137,15,0	1/1:3,14:17:32.80:302,33,0	1/1:0,12:12:36.02:329,36,0	1/1:4,20:24:51.02:467,51,0	0/0:23,0:23:54.13:0,54,609	0/0:33,0:33:90.27:0,90,1039	0/0:20,0:19:45.11:0,45,507
chr10	6959944	.	TG	T	6990.75	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=13.529;DP=483;FS=60.072;HRun=1;HaplotypeScore=177.3565;InbreedingCoeff=0.9973;MQ=62.89;MQ0=3;MQRankSum=-12.520;QD=21.78;ReadPosRankSum=-0.411;VQSLOD=0.7845;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,105,1379	1/1:7,2:9:26.16:176,26,0	0/0:28,0:18:53.60:0,54,678	0/0:34,0:24:36.87:0,37,633	1/1:14,4:18:43.67:289,44,0	1/1:8,1:9:26.11:166,26,0	1/1:11,5:16:43.82:341,44,0	1/1:16,2:18:38.66:293,39,0	1/1:14,1:15:40.60:254,41,0	1/1:12,5:17:49.91:400,50,0	1/1:9,6:15:41.57:384,42,0	1/1:9,3:12:32.17:250,32,0	1/1:10,2:12:32.13:239,32,0	1/1:13,4:17:44.42:364,44,0	1/1:12,5:17:47.86:379,48,0	1/1:13,4:17:49.81:387,50,0	1/1:11,5:16:38.19:305,38,0	1/1:8,5:13:35.73:368,36,0	1/1:3,8:11:29.89:335,30,0	1/1:9,2:11:32.54:256,33,0	1/1:8,8:15:44.88:457,45,0	1/1:7,7:14:38.42:364,38,0	1/1:13,3:16:44.07:344,44,0	1/1:8,2:10:17.72:155,18,0	1/1:17,5:22:64.56:484,65,0	0/0:18,0:18:54.18:0,54,759	0/0:27,0:26:81.15:0,81,1075	0/0:20,0:20:60.10:0,60,775
chr10	6959947	.	TTTGTTTTG	T	12614.61	PASS	AB=0.813;AC=43;AF=0.768;AN=56;BaseQRankSum=14.063;DP=473;FS=62.640;HRun=0;HaplotypeScore=212.0792;InbreedingCoeff=0.8757;MQ=60.29;MQ0=3;MQRankSum=-14.920;QD=40.69;ReadPosRankSum=3.012;VQSLOD=1.9893;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,102,3744	1/1:3,6:9:22.49:437,22,0	0/0:28,0:18:50.58:0,51,1016	0/0:33,0:22:45.06:0,45,855	1/1:5,13:18:50.77:806,51,0	1/1:2,7:9:27.09:563,27,0	1/1:6,9:15:36.06:750,36,0	1/1:14,1:15:27.07:430,27,0	1/1:2,13:15:40.99:902,41,0	1/1:5,11:16:44.57:802,45,0	1/1:12,4:16:38.21:469,38,0	1/1:4,9:13:27.55:566,28,0	1/1:4,8:12:21.98:539,22,0	1/1:10,6:16:36.62:607,37,0	1/1:7,10:17:41.96:761,42,0	1/1:7,10:17:41.23:816,41,0	1/1:8,7:15:35.33:553,35,0	0/1:10,3:13:24.60:262,0,25	1/1:9,1:10:7.85:138,8,0	1/1:2,9:11:28.92:569,29,0	1/1:10,4:13:19.70:254,20,0	1/1:8,6:14:39.71:510,40,0	1/1:4,10:14:39.18:669,39,0	1/1:7,2:9:10.06:204,10,0	1/1:10,12:22:54.73:1007,55,0	0/0:20,0:20:60.20:0,60,2295	0/0:26,0:25:78.24:0,78,2489	0/0:21,0:21:63.22:0,63,2066
chr10	6959953	.	TTG	T	2893.50	PASS	AB=1.000;AC=40;AF=0.714;AN=56;BaseQRankSum=13.084;DP=460;FS=11.354;HRun=0;HaplotypeScore=188.6234;InbreedingCoeff=0.6058;MQ=53.57;MQ0=5;MQRankSum=-9.032;QD=9.74;ReadPosRankSum=-0.265;VQSLOD=2.5959;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:89.42:0,89,1562	0/1:8,0:8:2.58:68,0,3	0/0:27,0:16:32.27:0,32,548	0/0:35,0:18:36.88:0,37,494	1/1:19,1:20:16.77:198,17,0	1/1:10,0:10:15.29:142,15,0	1/1:13,0:13:14.20:140,14,0	0/1:10,0:10:1.86:2,0,22	1/1:14,1:15:32.42:245,32,0	1/1:17,0:17:31.39:197,31,0	1/1:14,0:14:3.20:99,3,0	1/1:15,1:16:28.17:208,28,0	1/1:10,0:10:29.22:192,29,0	0/1:14,0:14:8.44:65,0,8	1/1:15,0:16:24.24:219,24,0	1/1:17,2:19:17.11:255,17,0	1/1:14,1:15:13.05:165,13,0	1/1:12,0:12:2.98:105,3,0	1/1:4,0:5:5.54:29,6,0	1/1:12,0:12:27.55:156,28,0	1/1:12,0:11:2.39:22,2,0	0/1:14,0:14:1.48:95,0,1	1/1:17,0:17:5.86:197,6,0	1/1:7,1:8:1.18:52,1,0	1/1:20,0:20:29.98:226,30,0	0/0:19,0:19:57.19:0,57,977	0/0:27,0:26:78.16:0,78,1181	0/0:21,0:21:63.13:0,63,973
chr10	6960026	.	GT	G	576.12	PASS	AB=0.984;AC=13;AF=0.232;AN=56;BaseQRankSum=-7.577;DP=531;FS=16.478;HRun=9;HaplotypeScore=176.2184;InbreedingCoeff=-0.0182;MQ=61.95;MQ0=5;MQRankSum=-0.370;QD=3.17;ReadPosRankSum=-1.319;VQSLOD=-0.3914;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:7,24:31:69.03:630,69,0	0/0:3,0:3:2.13:0,2,18	0/0:22,0:14:30.03:0,30,326	0/0:42,0:26:31.82:0,32,262	0/0:22,0:23:12.16:0,12,100	0/0:20,0:20:13.37:0,13,115	0/0:18,0:18:6.29:0,6,78	0/1:20,0:21:15.37:15,0,43	0/1:12,0:12:1.04:1,0,40	0/1:16,0:17:0.67:1,0,51	0/1:12,0:13:7.22:7,0,39	0/0:16,0:16:0.92:0,1,65	0/1:11,0:11:5.92:6,0,23	0/0:13,0:13:21.86:0,22,93	0/0:20,0:22:13.53:0,14,100	0/1:18,0:18:4.37:4,0,53	0/0:37,0:37:29.72:0,30,212	0/1:15,0:15:4.59:5,0,45	0/1:12,0:11:22.05:22,0,43	0/1:19,0:19:6.57:7,0,59	0/1:5,0:5:5.17:6,0,5	0/0:27,0:27:15.29:0,15,113	0/0:14,0:14:9.35:0,9,58	0/1:7,0:8:5:5,0,14	0/0:18,0:18:16.32:0,16,100	0/0:22,0:22:17.35:0,17,144	0/0:32,0:32:29.44:0,29,263	0/0:17,0:17:31.49:0,31,334
chr10	6960032	.	T	TG	12667.76	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=0.464;DP=517;FS=0.000;HRun=0;HaplotypeScore=121.7171;InbreedingCoeff=0.9790;MQ=57.68;MQ0=5;MQRankSum=-4.466;QD=31.99;ReadPosRankSum=1.640;VQSLOD=4.2850;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:28:59.32:272,59,0	1/1:0,3:3:9.03:125,9,0	0/0:21,0:12:27.98:0,28,379	0/0:33,0:18:33.01:0,33,452	1/1:9,18:24:65.69:757,66,0	1/1:2,20:22:60.11:819,60,0	1/1:0,20:20:48.16:677,48,0	1/1:5,17:22:36.63:579,37,0	1/1:0,12:12:36.12:502,36,0	1/1:4,13:17:48.05:609,48,0	1/1:3,12:15:21.06:469,21,0	1/1:4,13:16:45.04:580,45,0	1/1:0,10:10:27.09:377,27,0	1/1:2,11:13:32.80:353,33,0	1/1:4,16:20:39.44:648,39,0	1/1:1,17:18:29.23:650,29,0	1/1:1,33:34:99:1375,102,0	1/1:0,15:15:45.15:617,45,0	1/1:3,11:13:34.28:442,34,0	1/1:1,20:21:54.18:759,54,0	1/1:1,5:6:14.98:178,15,0	1/1:6,20:25:58.83:702,59,0	1/1:4,9:13:25.89:320,26,0	1/1:1,6:7:17.97:220,18,0	1/1:0,16:16:45.15:638,45,0	0/0:7,0:20:55.03:0,55,480	0/0:10,0:30:77.74:0,78,700	0/0:11,0:17:42.02:0,42,492
chr10	6960052	.	G	GTT	3484.53	PASS	AB=0.768;AC=25;AF=0.446;AN=56;BaseQRankSum=9.605;DP=497;FS=10.092;HRun=3;HaplotypeScore=145.2849;InbreedingCoeff=0.6852;MQ=48.55;MQ0=6;MQRankSum=-11.435;QD=15.98;ReadPosRankSum=-0.250;VQSLOD=0.0144;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:76.27:0,76,1060	1/1:5,2:7:11.91:154,12,0	0/0:16,0:9:27.09:0,27,375	0/0:20,0:7:8.13:0,8,105	1/1:19,4:25:18.88:281,19,0	0/0:22,0:22:58.39:0,58,730	0/0:18,0:18:43.39:0,43,586	0/1:14,3:18:18.52:188,0,19	0/0:15,0:15:41.24:0,41,504	1/1:15,4:20:5.33:369,5,0	0/1:12,1:17:51.67:162,0,52	1/1:13,3:16:7.18:286,7,0	1/1:7,4:10:16.88:269,17,0	1/1:10,4:14:19.55:254,20,0	1/1:8,8:17:21.05:493,21,0	0/0:13,0:13:34.36:0,34,460	0/0:39,0:39:99:0,106,1379	0/1:9,5:15:22.78:249,0,23	0/0:16,0:14:33.12:0,33,399	0/0:17,0:17:46.39:0,46,605	1/1:4,1:5:5.38:58,5,0	1/1:15,9:25:18.99:429,19,0	1/1:9,3:14:19.49:231,19,0	1/1:7,1:8:1.85:61,2,0	0/0:13,0:13:36.12:0,36,503	0/0:22,0:22:65.66:0,66,625	0/0:30,0:30:68.48:0,68,587	0/0:8,0:8:11.87:0,12,79
chr10	6960055	.	TG	T	1241.64	PASS	AB=0.898;AC=25;AF=0.446;AN=56;BaseQRankSum=10.668;DP=475;FS=6.196;HRun=1;HaplotypeScore=136.6809;InbreedingCoeff=0.7067;MQ=48.33;MQ0=8;MQRankSum=-10.549;QD=5.97;ReadPosRankSum=-2.149;VQSLOD=-0.3577;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:69.66:0,70,1136	1/1:2,5:7:13.53:67,14,0	0/0:15,0:9:27.08:0,27,373	0/0:18,0:6:11.12:0,11,141	1/1:21,5:23:33.05:194,33,0	0/0:22,0:22:62.88:0,63,771	0/0:17,0:17:42.03:0,42,578	0/1:15,2:17:32.11:62,0,32	0/0:13,0:13:38.88:0,39,427	1/1:15,4:19:9.52:119,10,0	0/1:12,4:16:51.57:116,0,52	1/1:13,3:15:14.15:119,14,0	1/1:8,3:10:23.03:136,23,0	1/1:15,2:14:14.76:82,15,0	1/1:15,1:16:25.97:104,26,0	0/0:12,0:12:33.03:0,33,453	0/0:37,0:37:99:0,105,1344	0/1:13,0:13:26.44:45,0,26	0/0:14,0:12:30.06:0,30,387	0/0:16,0:16:45.02:0,45,582	1/1:4,0:4:5.17:22,5,0	1/1:23,2:24:26.01:211,26,0	1/1:13,2:15:23.92:131,24,0	1/1:6,0:6:7.18:43,7,0	0/0:14,0:14:39.02:0,39,527	0/0:22,0:22:26.93:0,27,297	0/0:29,0:29:24.55:0,25,340	0/0:7,0:7:0:0,0,2
chr10	6960058	.	TTG	T	774.12	PASS	AB=0.997;AC=21;AF=0.375;AN=56;BaseQRankSum=-0.524;DP=479;FS=0.000;HRun=0;HaplotypeScore=143.7094;InbreedingCoeff=-0.0644;MQ=46.57;MQ0=8;MQRankSum=-3.413;QD=2.83;ReadPosRankSum=-2.884;VQSLOD=1.9470;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:81.13:0,81,1427	1/1:7,0:7:1.78:50,2,0	0/0:13,0:7:17.85:0,18,229	0/0:18,0:5:12.03:0,12,146	0/1:26,0:23:41.83:65,0,42	0/0:22,0:22:34.10:0,34,403	0/0:17,0:17:41.84:0,42,344	0/1:18,0:18:23.84:75,0,24	0/0:13,1:14:16.19:0,16,239	0/1:20,1:21:46.37:169,0,46	0/1:15,0:15:53.45:53,0,101	0/1:17,0:16:36.44:80,0,36	1/1:12,0:11:3.24:155,3,0	0/1:17,0:14:10.96:11,0,38	0/1:16,0:16:13.81:14,0,35	0/0:12,0:12:32.80:0,33,276	0/0:34,2:36:45.50:0,45,644	0/1:15,0:15:11.49:11,0,76	0/0:15,0:13:8.25:0,8,196	0/0:14,0:14:38.81:0,39,308	0/1:4,0:4:0.69:1,0,1	0/1:23,0:22:37.23:77,0,37	0/1:16,0:16:15.92:16,0,37	1/1:7,0:7:1.65:31,2,0	0/0:13,0:13:31.57:0,32,242	0/1:21,0:21:44.34:44,0,208	0/1:32,0:32:54.75:55,0,349	1/1:7,0:7:9.33:30,9,0
chr10	6960873	.	A	AGCT	32685.53	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=1.485;DP=708;FS=32.275;HRun=0;HaplotypeScore=257.3601;InbreedingCoeff=0.9706;MQ=51.10;MQ0=2;MQRankSum=-6.828;QD=48.07;ReadPosRankSum=3.436;VQSLOD=3.3129;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,24:30:42.14:961,42,0	1/1:4,10:14:33.11:775,33,0	0/0:10,0:9:24.55:0,25,355	0/0:18,0:18:28.15:0,28,423	1/1:10,13:23:18.04:375,18,0	1/1:5,13:18:36.12:843,36,0	1/1:14,22:36:96.29:2176,96,0	1/1:15,16:31:81.28:1794,81,0	1/1:12,8:20:42.14:956,42,0	1/1:13,31:44:99:2873,129,0	1/1:5,9:15:21.07:461,21,0	1/1:15,27:41:99:2296,102,0	1/1:7,20:27:75.26:1713,75,0	1/1:12,18:30:66.20:1426,66,0	1/1:15,21:36:84.26:1849,84,0	1/1:19,26:45:99:2897,129,0	1/1:5,16:21:42.14:985,42,0	1/1:3,22:25:66.70:1553,67,0	1/1:11,12:22:60.21:1300,60,0	1/1:5,13:18:33.10:695,33,0	1/1:18,28:45:48.16:1017,48,0	1/1:8,12:20:18.06:392,18,0	1/1:5,9:14:12.04:280,12,0	1/1:13,19:32:41.70:962,42,0	1/1:7,12:19:39.13:893,39,0	1/1:9,15:24:72.25:1589,72,0	1/1:8,11:19:51.17:1131,51,0	1/1:0,7:7:21.07:494,21,0
chr10	6960874	.	G	GC	14224.28	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=4.151;DP=626;FS=42.475;HRun=0;HaplotypeScore=263.9933;InbreedingCoeff=0.9315;MQ=54.46;MQ0=4;MQRankSum=-6.373;QD=23.87;ReadPosRankSum=5.070;VQSLOD=0.8392;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:29:42.12:491,42,0	1/1:12,0:12:11.17:315,11,0	0/0:10,0:9:23.97:0,24,302	0/0:20,0:20:29.48:0,29,399	1/1:19,1:20:14.82:159,15,0	1/1:17,0:17:36.11:425,36,0	1/1:27,1:28:59.76:801,60,0	1/1:26,1:27:53.28:779,53,0	1/1:15,0:15:33.10:396,33,0	1/1:39,0:39:99:1239,113,0	1/1:14,0:14:21.06:262,21,0	1/1:36,3:38:95.87:1104,96,0	1/1:20,2:22:63.13:686,63,0	1/1:26,0:26:60.15:686,60,0	1/1:29,2:30:66.13:732,66,0	1/1:36,2:38:94.84:1163,95,0	1/1:17,1:18:36.10:399,36,0	1/1:22,2:24:63.04:643,63,0	1/1:20,0:19:51.13:590,51,0	1/1:17,0:17:11.24:374,11,0	1/1:37,2:38:38.67:456,39,0	1/1:19,0:19:18.06:234,18,0	1/1:14,0:14:12.04:142,12,0	1/1:25,2:27:36.06:396,36,0	1/1:14,1:15:33.10:393,33,0	1/1:20,1:21:62.95:669,63,0	1/1:18,0:16:41.86:468,42,0	1/1:7,0:7:21.05:220,21,0
chr10	6960877	.	CA	C	15266.52	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=4.581;DP=610;FS=8.531;HRun=1;HaplotypeScore=240.8247;InbreedingCoeff=0.9472;MQ=54.26;MQ0=4;MQRankSum=-6.991;QD=26.37;ReadPosRankSum=5.404;VQSLOD=3.6113;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,28:29:47.67:574,48,0	1/1:0,12:12:30.10:414,30,0	0/0:10,0:9:24.05:0,24,314	0/0:21,0:21:44.09:0,44,561	1/1:1,18:19:11.50:145,12,0	1/1:0,17:17:29.93:413,30,0	1/1:1,26:27:72.45:915,72,0	1/1:1,22:23:60.20:833,60,0	1/1:0,14:14:30.02:369,30,0	1/1:2,35:37:99:1467,108,0	1/1:0,13:13:18.06:243,18,0	1/1:1,37:37:93.25:1218,93,0	1/1:4,20:24:63.17:823,63,0	1/1:0,23:23:48.03:595,48,0	1/1:4,25:28:56.96:717,57,0	1/1:2,35:37:87.15:1159,87,0	1/1:4,16:20:42.02:517,42,0	1/1:1,22:23:63.17:853,63,0	1/1:1,17:17:51.13:670,51,0	1/1:0,15:15:30.06:391,30,0	1/1:6,34:39:33.59:411,34,0	1/1:0,18:18:15.05:199,15,0	1/1:0,14:14:12.04:164,12,0	1/1:2,25:27:17.68:285,18,0	1/1:1,15:16:29.72:367,30,0	1/1:2,18:20:53.97:714,54,0	1/1:3,16:18:39.12:521,39,0	1/1:0,7:7:21.07:292,21,0
chr10	6962489	.	T	TGGGCGGC	8520.13	PASS	AB=0.889;AC=44;AF=0.786;AN=56;BaseQRankSum=-0.163;DP=418;FS=11.008;HRun=0;HaplotypeScore=133.7997;InbreedingCoeff=0.5895;MQ=80.35;MQ0=0;MQRankSum=-8.276;QD=25.51;ReadPosRankSum=1.188;VQSLOD=4.2077;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:15,0:21:8.27:8,0,46	1/1:3,0:3:1.95:59,2,0	0/0:17,0:17:22.13:0,22,778	0/0:16,0:14:31.49:0,31,486	1/1:3,0:3:3:25,3,0	1/1:9,0:9:9.02:137,9,0	0/1:11,0:11:2.10:68,0,2	1/1:11,0:11:0.27:78,0,0	1/1:9,0:9:14.86:183,15,0	1/1:13,0:13:23.56:204,24,0	1/1:9,0:9:0.61:39,1,0	1/1:12,21:39:38.94:1360,39,0	1/1:15,9:24:57.16:1931,57,0	1/1:5,21:35:44.83:1643,45,0	1/1:17,0:17:10.38:276,10,0	1/1:18,0:18:9.01:120,9,0	1/1:6,0:18:15.05:304,15,0	1/1:9,0:9:7.18:171,7,0	1/1:9,0:9:4.35:119,4,0	1/1:10,0:10:10.39:164,10,0	1/1:14,0:14:5.80:35,6,0	1/1:4,5:12:12.01:417,12,0	1/1:4,4:8:11.83:304,12,0	1/1:3,13:21:17.73:682,18,0	1/1:11,0:11:23.55:195,24,0	0/0:24,0:24:51.16:0,51,1026	0/0:16,0:19:54.16:0,54,1246	0/0:7,0:7:15.05:0,15,345
chr10	6962490	.	G	GGGCGGC	6385.14	PASS	AB=0.977;AC=38;AF=0.679;AN=56;BaseQRankSum=3.495;DP=358;FS=3.847;HRun=0;HaplotypeScore=118.2223;InbreedingCoeff=0.2437;MQ=81.84;MQ0=0;MQRankSum=-8.259;QD=22.97;ReadPosRankSum=4.257;VQSLOD=4.5587;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:13,0:13:2.33:2,0,87	1/1:3,0:3:1.95:45,2,0	0/0:16,0:16:24.26:0,24,731	0/0:17,0:14:29.56:0,30,467	1/1:2,0:2:3:25,3,0	1/1:7,0:7:8.64:118,9,0	0/1:10,0:10:18.85:51,0,19	0/1:11,0:11:36.86:72,0,37	1/1:7,0:7:14.93:171,15,0	1/1:10,0:10:4.94:148,5,0	0/1:7,0:7:22.15:45,0,22	0/1:34,0:34:24.28:920,0,24	0/1:23,2:25:7.44:1386,0,7	1/1:29,1:30:1.64:1169,2,0	0/1:16,0:16:13:200,0,13	1/1:14,0:14:8.66:99,9,0	1/1:11,0:11:18.06:297,18,0	1/1:9,0:9:6.57:111,7,0	1/1:8,0:8:4.16:106,4,0	1/1:9,0:9:9.76:110,10,0	1/1:13,0:13:8.44:71,8,0	0/1:7,1:8:33.72:326,0,34	1/1:6,1:7:11.82:263,12,0	1/1:16,0:16:18.05:484,18,0	1/1:8,0:8:22.23:167,22,0	0/0:21,0:21:57.15:0,57,1084	0/0:19,0:19:54.17:0,54,1186	0/0:7,0:7:21.04:0,21,399
chr10	6962491	.	G	GGC	2092.32	PASS	AB=0.940;AC=33;AF=0.589;AN=56;BaseQRankSum=5.221;DP=354;FS=1.665;HRun=0;HaplotypeScore=110.4240;InbreedingCoeff=0.0213;MQ=80.94;MQ0=0;MQRankSum=-7.171;QD=7.78;ReadPosRankSum=4.901;VQSLOD=3.0298;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:13,0:13:2.53:3,0,56	1/1:3,0:3:8.57:68,9,0	0/0:16,0:16:6.80:0,7,485	0/0:16,0:13:32.72:0,33,315	1/1:3,0:3:2.98:25,3,0	1/1:3,4:7:3.97:54,4,0	0/1:5,5:10:19.61:49,0,20	0/1:2,7:10:18.06:129,0,18	0/1:7,0:7:14.50:36,0,14	0/1:11,0:11:20.48:147,0,20	0/1:6,0:6:18.64:19,0,19	0/1:32,0:32:63.78:207,0,64	0/1:24,0:24:18.24:342,0,18	0/1:29,0:29:0.82:286,0,1	0/1:15,0:15:6.15:71,0,6	1/1:3,9:13:6.03:63,6,0	1/1:10,0:10:11.42:69,11,0	1/1:8,0:8:10.13:53,10,0	0/1:9,0:9:12.70:65,0,13	1/1:9,0:9:16.25:120,16,0	1/1:11,0:11:7.21:64,7,0	0/1:9,0:9:35.57:73,0,36	0/1:6,0:6:5.26:54,0,5	1/1:16,0:16:4.02:133,4,0	1/1:8,0:8:13.89:133,14,0	0/0:23,0:23:58.87:0,59,707	0/0:21,0:21:57.16:0,57,804	0/0:9,0:9:21.05:0,21,279
chr10	6962492	.	G	GC	781.22	PASS	AB=0.968;AC=24;AF=0.429;AN=56;BaseQRankSum=6.480;DP=334;FS=12.716;HRun=0;HaplotypeScore=67.5283;InbreedingCoeff=-0.4986;MQ=80.33;MQ0=0;MQRankSum=-3.622;QD=3.30;ReadPosRankSum=4.457;VQSLOD=1.1455;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:11.46:0,11,87	0/1:3,0:3:10.98:50,0,11	0/0:15,0:15:34.15:0,34,469	0/0:15,0:12:26.83:0,27,291	0/1:3,0:3:18.57:19,0,19	0/1:7,0:7:17.04:19,0,17	0/1:10,0:10:17.94:18,0,21	0/1:10,0:10:26.13:59,0,26	0/1:7,0:7:7.06:7,0,51	0/1:5,5:11:35.10:131,0,35	0/1:7,0:7:11.28:11,0,29	0/1:25,0:25:42.16:42,0,114	0/1:24,0:25:64.29:64,0,136	0/1:24,0:24:49.88:69,0,50	0/1:13,0:13:41.96:42,0,49	0/1:13,0:13:16.40:16,0,32	0/1:10,0:10:14.48:14,0,22	0/1:8,0:8:21.05:21,0,63	0/1:9,0:9:51.84:55,0,52	0/1:6,3:9:26.71:68,0,27	1/1:9,0:9:2.60:55,3,0	0/1:8,0:8:18.58:19,0,38	0/1:7,0:7:9.60:18,0,10	1/1:11,0:11:0.03:40,0,0	0/1:8,0:8:44.31:102,0,44	0/0:23,0:23:60.04:0,60,676	0/0:21,0:21:60.09:0,60,754	0/0:9,0:9:27.04:0,27,304
chr10	6964506	.	T	TC	344.09	PASS	AB=0.908;AC=6;AF=0.107;AN=56;BaseQRankSum=-0.772;DP=342;FS=4.823;HRun=8;HaplotypeScore=43.9164;InbreedingCoeff=0.2640;MQ=81.17;MQ0=1;MQRankSum=-1.529;QD=5.29;ReadPosRankSum=-2.270;VQSLOD=-0.5406;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,16:21:36.11:412,36,0	0/0:5,0:5:15.01:0,15,137	0/1:12,1:11:23.70:24,0,115	0/0:18,0:15:14.14:0,14,111	0/0:15,0:15:30.01:0,30,274	0/1:13,0:13:6.75:7,0,193	0/0:15,0:15:26.69:0,27,245	0/0:13,0:13:27.01:0,27,246	0/0:9,0:9:27.01:0,27,247	0/0:12,0:12:29.96:0,30,261	0/0:8,0:8:15:0,15,137	0/0:5,0:5:14.99:0,15,132	0/0:11,0:11:30:0,30,269	0/1:11,1:12:1.60:2,0,241	0/0:8,0:8:17.14:0,17,163	0/0:10,0:10:27.01:0,27,247	0/0:23,0:23:56.52:0,57,503	0/0:10,0:10:27.01:0,27,247	0/0:14,0:14:29.98:0,30,268	0/0:15,0:16:14.10:0,14,331	0/0:29,0:29:77.77:0,78,698	0/0:6,0:6:12:0,12,109	0/0:4,0:4:9:0,9,82	0/0:11,0:11:14.99:0,15,137	0/0:12,0:12:33.02:0,33,301	0/0:19,0:19:36:0,36,329	0/1:4,1:5:19.61:20,0,95	0/0:4,0:4:12.01:0,12,110
chr10	6969313	.	G	GTTTTT	5758.80	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=4.819;DP=453;FS=19.809;HRun=9;HaplotypeScore=128.0376;InbreedingCoeff=0.9454;MQ=70.24;MQ0=2;MQRankSum=-7.040;QD=30.63;ReadPosRankSum=-2.288;VQSLOD=1.0054;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:23:39.04:847,39,0	0/0:7,0:7:18.04:0,18,297	0/0:17,0:17:22.79:0,23,261	0/0:15,0:12:0.80:0,1,233	0/0:19,0:18:34.95:0,35,524	1/1:5,9:17:21.58:791,22,0	1/1:6,9:17:22.63:523,23,0	0/0:28,0:28:63.02:0,63,947	1/1:3,6:9:9.02:195,9,0	0/0:17,0:17:44.79:0,45,648	0/0:13,0:13:35.88:0,36,508	0/0:20,0:20:48.08:0,48,782	0/0:14,0:13:18.07:0,18,435	0/0:14,0:14:29.99:0,30,447	0/0:20,0:20:57.12:0,57,912	1/1:4,3:7:11.86:312,12,0	1/1:10,10:20:39:985,39,0	0/0:13,0:13:36.11:0,36,596	1/1:10,5:16:33.08:606,33,0	1/1:2,7:12:24:477,24,0	0/0:15,0:15:39.07:0,39,569	0/0:21,0:21:57.07:0,57,873	0/0:16,0:16:40.10:0,40,577	0/0:15,0:14:39.04:0,39,571	1/1:8,9:18:29.38:684,29,0	1/1:11,0:17:21.27:106,21,0	1/1:4,0:18:35.21:165,35,0	1/1:1,0:13:11.96:68,12,0
chr10	6970055	.	TG	T	17574.62	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-3.074;DP=672;FS=4.078;HRun=6;HaplotypeScore=66.2183;InbreedingCoeff=0.9905;MQ=70.65;MQ0=0;MQRankSum=-6.504;QD=27.33;ReadPosRankSum=5.108;VQSLOD=5.2654;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,44:46:99:1354,126,0	1/1:2,8:10:20.78:225,21,0	0/0:17,1:17:30.56:0,31,562	0/0:11,0:11:21.03:0,21,238	1/1:2,20:22:57.14:613,57,0	1/1:1,26:27:69.17:742,69,0	1/1:1,24:25:66.17:709,66,0	1/1:4,22:26:66.12:684,66,0	1/1:1,15:16:36.09:387,36,0	1/1:3,29:32:90.17:940,90,0	1/1:3,6:9:18.04:193,18,0	1/1:4,28:32:81.20:871,81,0	1/1:2,19:21:51.08:548,51,0	1/1:4,30:34:81.20:870,81,0	1/1:1,31:32:93.23:1000,93,0	1/1:2,21:23:63.16:677,63,0	1/1:1,32:33:90.23:967,90,0	1/1:2,30:32:81.20:871,81,0	1/1:4,16:20:39.10:419,39,0	1/1:0,13:13:30.07:322,30,0	1/1:4,52:56:99:1483,138,0	1/1:2,12:14:33.08:355,33,0	1/1:0,13:13:30.08:322,30,0	1/1:0,18:18:51.13:548,51,0	1/1:0,26:26:72.18:774,72,0	1/1:1,26:27:78.16:827,78,0	1/1:2,16:18:36.09:387,36,0	1/1:1,17:18:45.11:484,45,0
chr10	6970235	.	G	GT	11228.89	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-16.214;DP=632;FS=1.702;HRun=0;HaplotypeScore=58.0774;InbreedingCoeff=0.9927;MQ=90.36;MQ0=0;MQRankSum=-3.318;QD=42.37;ReadPosRankSum=4.679;VQSLOD=5.2929;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,45:46:99:2109,132,0	0/0:7,0:7:21.04:0,21,272	0/0:35,0:35:99:0,100,1279	0/0:26,0:26:72.24:0,72,1000	0/0:25,0:25:72.22:0,72,973	1/1:1,12:13:33.11:527,33,0	1/1:2,24:26:60.20:959,60,0	0/0:23,0:23:69.21:0,69,934	1/1:1,25:26:72.24:1139,72,0	0/0:17,0:17:51.17:0,51,713	0/0:9,0:9:24.08:0,24,335	0/0:27,0:27:78.22:0,78,1060	0/0:24,0:24:72.24:0,72,1006	0/0:21,0:21:63.21:0,63,880	0/0:24,0:24:69.23:0,69,964	1/1:0,19:19:54.18:862,54,0	1/1:0,42:42:99:1869,117,0	0/0:31,0:31:93.28:0,93,1278	1/1:0,18:18:51.13:765,51,0	1/1:1,22:23:63.21:989,63,0	0/0:37,0:37:99:0,111,1534	0/0:15,0:15:45.14:0,45,610	0/0:14,0:14:42.13:0,42,573	0/0:32,0:32:96.30:0,96,1310	1/1:1,13:14:29.91:479,30,0	1/1:2,17:19:12.22:773,12,0	1/1:0,13:14:33.11:516,33,0	1/1:0,5:5:15.05:240,15,0
chr10	6971672	.	T	TG	5933.95	PASS	AB=0.600;AC=29;AF=0.518;AN=56;BaseQRankSum=-6.571;DP=581;FS=0.000;HRun=8;HaplotypeScore=72.0729;InbreedingCoeff=0.8973;MQ=66.53;MQ0=1;MQRankSum=-0.263;QD=18.96;ReadPosRankSum=0.599;VQSLOD=4.5665;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:14,31:45:44.75:769,45,0	1/1:0,3:3:6.02:69,6,0	0/0:9,1:10:11.62:0,12,81	0/0:13,0:11:20.52:0,21,150	1/1:7,15:22:36.08:397,36,0	0/0:22,0:22:51.01:0,51,462	0/0:27,0:27:53.96:0,54,483	1/1:8,10:18:30.09:346,30,0	0/0:22,0:22:59.98:0,60,536	1/1:3,9:12:21:215,21,0	0/1:4,8:12:9.41:155,0,9	1/1:0,8:8:18.05:208,18,0	1/1:4,18:22:36.07:401,36,0	1/1:6,21:27:51.14:579,51,0	1/1:4,14:18:30.08:346,30,0	0/0:20,0:20:29.98:0,30,274	0/0:48,0:48:99:0,123,1114	1/1:5,23:28:32.71:630,33,0	0/0:18,0:18:42.02:0,42,384	0/0:16,0:16:35.95:0,36,320	1/1:5,30:34:60.17:683,60,0	1/1:7,11:18:23.66:277,24,0	1/1:8,8:16:27.04:293,27,0	1/1:3,26:29:5.25:568,5,0	0/0:16,0:16:39.01:0,39,352	0/0:24,0:24:60.01:0,60,545	0/0:20,0:21:56.05:0,56,499	0/0:11,0:11:27.01:0,27,247
chr10	6972920	.	CTTT	C	2223.76	PASS	AB=0.619;AC=28;AF=0.500;AN=56;BaseQRankSum=4.275;DP=476;FS=0.491;HRun=18;HaplotypeScore=79.8546;InbreedingCoeff=0.7796;MQ=63.48;MQ0=1;MQRankSum=-1.131;QD=8.65;ReadPosRankSum=7.099;VQSLOD=-0.7239;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:10,2:34:11.19:11,0,47	0/1:7,7:15:1.36:169,0,1	0/0:21,0:12:7.67:0,8,84	0/0:5,0:5:5.50:0,5,30	1/1:7,14:23:7.69:280,8,0	0/0:21,0:21:49.34:0,49,688	0/0:11,0:14:36.52:0,37,493	1/1:8,8:19:27.70:265,28,0	0/0:12,0:14:24.01:0,24,292	1/1:5,5:11:11.04:104,11,0	1/1:6,7:13:6.87:85,7,0	1/1:7,9:20:13.51:263,14,0	1/1:7,3:10:5.62:59,6,0	1/1:6,5:11:7.19:85,7,0	1/1:8,12:21:6.06:229,6,0	0/0:23,0:24:60.13:0,60,824	0/0:12,0:23:40.18:0,40,369	1/1:3,9:13:11.70:142,12,0	0/0:13,0:15:42.03:0,42,542	0/0:11,0:13:26.99:0,27,321	1/1:5,7:15:16.15:161,16,0	1/1:7,13:22:21.55:210,22,0	1/1:3,9:14:22.11:210,22,0	1/1:7,8:16:16.06:164,16,0	0/0:7,0:7:11.99:0,12,171	0/0:22,0:20:41.17:0,41,616	0/0:21,0:31:38.57:0,39,516	0/0:7,0:7:18.06:0,18,268
chr10	6973435	.	GTATTTTATTTTAT	G	21004.55	PASS	AB=0.926;AC=43;AF=0.796;AN=54;BaseQRankSum=12.073;DP=490;FS=0.469;HRun=0;HaplotypeScore=194.4863;InbreedingCoeff=0.8596;MQ=69.41;MQ0=2;MQRankSum=-12.054;QD=54.28;ReadPosRankSum=3.596;VQSLOD=4.3414;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:72.25:0,72,4215	1/1:2,9:12:21.07:798,21,0	0/0:11,0:11:14.90:0,15,300	0/0:16,0:16:17.94:0,18,567	1/1:6,14:20:33.07:1160,33,0	1/1:4,17:21:45.15:1710,45,0	1/1:6,7:13:21.07:757,21,0	1/1:17,10:27:30.09:871,30,0	1/1:8,7:15:15.05:570,15,0	1/1:5,11:16:33.11:1254,33,0	1/1:9,14:23:39.05:1294,39,0	1/1:10,12:22:27.09:1026,27,0	1/1:5,14:19:33.11:1254,33,0	1/1:9,11:20:33.11:1254,33,0	1/1:4,9:13:24.08:912,24,0	1/1:9,11:20:18.06:684,18,0	1/1:6,13:19:27.09:1026,27,0	1/1:4,11:15:30.10:1140,30,0	1/1:9,6:15:18.06:560,18,0	1/1:5,17:21:48.16:1824,48,0	./.	1/1:7,6:13:18.06:684,18,0	1/1:5,6:11:12.04:456,12,0	1/1:3,10:13:15.05:570,15,0	1/1:3,10:13:27.09:1026,27,0	0/1:23,2:25:99:171,0,2676	0/0:20,0:20:54.19:0,54,2597	0/0:21,0:21:60.21:0,60,3203
chr10	6974419	.	AAAAG	A	2292.36	PASS	AB=1.000;AC=32;AF=0.571;AN=56;BaseQRankSum=-0.338;DP=578;FS=53.335;HRun=0;HaplotypeScore=172.8196;InbreedingCoeff=0.2064;MQ=58.98;MQ0=11;MQRankSum=-1.039;QD=5.22;ReadPosRankSum=-0.648;VQSLOD=1.0936;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:22.57:0,23,220	0/0:7,0:7:3.02:0,3,7	0/0:21,0:9:2.02:0,2,49	0/1:32,0:11:16.84:17,0,41	0/1:27,0:24:32.93:33,0,35	1/1:15,1:16:37.94:234,38,0	1/1:8,0:7:11.50:59,12,0	0/1:26,0:26:6.32:6,0,92	1/1:19,1:20:15.40:188,15,0	0/1:36,0:35:95:108,0,95	0/1:27,0:24:7.97:8,0,39	0/0:19,0:19:8.71:0,9,212	0/1:18,0:18:6.26:6,0,178	0/1:18,0:17:5.37:5,0,155	0/0:24,0:24:3.34:0,3,108	1/1:20,1:21:48.36:293,48,0	1/1:26,0:25:46.16:261,46,0	0/0:23,0:21:5.94:0,6,158	1/1:13,0:11:12.78:71,13,0	1/1:13,1:13:27.71:201,28,0	0/1:13,0:13:9.02:9,0,10	0/0:18,0:17:7.36:0,7,147	0/1:17,0:17:33.45:33,0,79	0/1:20,0:19:46.36:46,0,173	1/1:17,2:17:33.17:242,33,0	1/1:32,0:31:67.12:395,67,0	1/1:32,0:31:20.91:209,21,0	1/1:4,0:3:8.63:45,9,0
chr10	6974420	.	AAAG	A	8173.08	PASS	AB=0.990;AC=46;AF=0.821;AN=56;BaseQRankSum=-3.173;DP=583;FS=38.224;HRun=0;HaplotypeScore=145.7642;InbreedingCoeff=0.0370;MQ=58.02;MQ0=12;MQRankSum=2.015;QD=14.54;ReadPosRankSum=2.296;VQSLOD=2.3475;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:28:13.39:15,0,13	1/1:7,0:7:17.29:80,17,0	0/0:21,0:8:11.79:0,12,88	0/1:32,0:11:6.03:6,0,51	1/1:27,0:24:39.18:269,39,0	1/1:5,11:16:45.05:591,45,0	1/1:1,7:7:12.93:183,13,0	1/1:25,1:26:42.72:240,43,0	1/1:15,5:20:48.84:528,49,0	1/1:36,0:35:61.67:445,62,0	1/1:27,0:24:45.95:228,46,0	0/1:20,0:20:52.26:52,0,63	0/1:18,0:18:55.50:60,0,55	0/1:18,0:17:25.74:26,0,49	1/1:24,0:24:24.53:163,25,0	1/1:11,10:21:60.01:749,60,0	1/1:18,8:25:64.36:820,64,0	0/1:21,2:21:39.06:120,0,39	1/1:7,6:11:26.81:329,27,0	1/1:9,6:14:41.72:448,42,0	1/1:14,0:14:27.63:136,28,0	0/1:19,0:18:10.40:49,0,10	1/1:17,0:17:1.68:83,2,0	0/1:20,0:19:47.90:82,0,48	1/1:9,10:17:44.44:555,44,0	1/1:18,14:32:83.79:1009,84,0	1/1:22,10:31:75.36:769,75,0	1/1:1,3:3:9.03:136,9,0
chr10	6974421	.	AAG	A	9974.02	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-1.866;DP=587;FS=0.000;HRun=0;HaplotypeScore=131.3993;InbreedingCoeff=0.7397;MQ=57.89;MQ0=12;MQRankSum=-0.291;QD=18.78;ReadPosRankSum=2.656;VQSLOD=5.1078;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:29:48.18:244,48,0	1/1:3,4:7:17.83:208,18,0	0/0:22,0:8:11.78:0,12,101	0/0:34,0:11:2.33:0,2,63	1/1:15,12:24:66.15:750,66,0	1/1:17,0:17:47.82:372,48,0	1/1:8,0:7:13.21:97,13,0	1/1:14,11:25:63.08:686,63,0	1/1:18,1:19:49.65:384,50,0	1/1:22,14:35:96.73:954,97,0	1/1:11,16:24:56.79:641,57,0	1/1:20,1:21:6.38:247,6,0	1/1:19,0:19:7.95:197,8,0	1/1:18,0:17:19.42:147,19,0	1/1:16,8:24:57.16:606,57,0	1/1:19,2:21:59.08:439,59,0	1/1:24,2:25:62.34:471,62,0	1/1:19,4:21:12.90:309,13,0	1/1:11,2:11:25.07:183,25,0	1/1:14,1:14:40.09:322,40,0	1/1:7,7:14:30.05:370,30,0	1/1:18,1:18:40.45:238,40,0	1/1:16,1:17:34.02:253,34,0	1/1:19,1:19:30.24:242,30,0	1/1:17,2:17:44.22:361,44,0	1/1:31,1:31:82.46:643,82,0	1/1:30,1:30:75.34:541,75,0	1/1:4,0:3:8.97:70,9,0
chr10	6974422	.	AG	A	9926.75	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-1.838;DP=591;FS=2.604;HRun=1;HaplotypeScore=123.0645;InbreedingCoeff=0.8835;MQ=56.82;MQ0=12;MQRankSum=-2.695;QD=18.69;ReadPosRankSum=2.945;VQSLOD=5.3789;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,29:29:54.13:709,54,0	1/1:6,1:7:20.80:145,21,0	0/0:22,2:8:10.86:0,11,97	0/0:33,0:12:7.37:0,7,82	1/1:22,5:24:67:490,67,0	1/1:17,0:17:47.10:303,47,0	1/1:7,0:6:11.75:70,12,0	1/1:21,4:25:62.82:491,63,0	1/1:16,2:18:43.81:289,44,0	1/1:31,5:35:99:813,101,0	1/1:25,2:24:56.49:422,56,0	1/1:17,4:21:41.83:404,42,0	1/1:13,6:19:45.83:445,46,0	1/1:13,5:17:42.14:401,42,0	1/1:24,0:24:59.51:439,60,0	1/1:20,1:21:57.13:359,57,0	1/1:26,0:25:58.29:393,58,0	1/1:21,1:20:21.92:285,22,0	1/1:14,0:12:24.38:141,24,0	1/1:15,0:14:41.39:293,41,0	1/1:12,1:13:29.68:203,30,0	1/1:8,12:19:51.03:584,51,0	1/1:9,8:17:44.43:452,44,0	1/1:16,4:19:48.80:462,49,0	1/1:19,0:17:42.13:243,42,0	1/1:33,0:32:82.36:560,82,0	1/1:30,2:31:74.41:476,74,0	1/1:4,0:3:8.81:53,9,0
chr10	6974460	.	G	GAGAA	24398.62	PASS	AB=1.000;AC=51;AF=0.911;AN=56;BaseQRankSum=-2.491;DP=699;FS=2.735;HRun=0;HaplotypeScore=120.6355;InbreedingCoeff=0.8016;MQ=54.60;MQ0=13;MQRankSum=-0.174;QD=39.48;ReadPosRankSum=2.618;VQSLOD=4.8187;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:39.11:0,39,630	1/1:2,1:3:9.03:201,9,0	0/0:54,0:19:19.30:0,19,247	0/1:76,0:22:5.09:5,0,120	1/1:5,20:24:51.09:1130,51,0	1/1:8,11:19:33.11:791,33,0	1/1:7,4:10:15.05:371,15,0	1/1:7,23:32:78.70:1495,79,0	1/1:6,10:16:24.08:599,24,0	1/1:10,23:34:81.25:1806,81,0	1/1:2,16:16:33.02:661,33,0	1/1:3,22:26:54.18:1270,54,0	1/1:5,14:20:19.19:930,19,0	1/1:5,16:21:39.12:851,39,0	1/1:10,19:30:63.17:1453,63,0	1/1:8,18:28:57.08:1297,57,0	1/1:6,15:22:22.25:919,22,0	1/1:8,12:22:32.89:788,33,0	1/1:9,10:20:51.16:1019,51,0	1/1:5,14:18:48.12:1069,48,0	1/1:4,10:14:30.03:593,30,0	1/1:7,15:22:48.15:1104,48,0	1/1:7,12:19:36.12:792,36,0	1/1:7,17:26:39.13:943,39,0	1/1:7,15:21:42.14:988,42,0	1/1:10,20:31:84.27:1830,84,0	1/1:10,18:30:54.17:1197,54,0	1/1:4,4:8:15.05:295,15,0
chr10	6974942	.	GAAAGAAAGAAAGAAAGAAAGAAA	G	2315.70	PASS	AB=1.000;AC=25;AF=0.481;AN=52;BaseQRankSum=2.376;DP=420;FS=10.143;HRun=0;HaplotypeScore=156.9509;InbreedingCoeff=0.1368;MQ=35.01;MQ0=44;MQRankSum=-3.479;QD=8.74;ReadPosRankSum=0.142;VQSLOD=2.0136;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:27:39.16:0,39,642	1/1:7,0:6:12.04:416,12,0	./.	./.	0/1:24,0:23:11.94:22,0,12	0/0:15,0:13:2.94:0,3,18	0/1:19,0:13:5.54:6,0,178	1/1:7,0:3:5.89:87,6,0	0/0:13,0:11:3.01:0,3,53	1/1:6,15:20:29.98:479,30,0	1/1:7,0:6:9.03:126,9,0	1/1:22,0:19:3.01:60,3,0	0/0:11,0:10:6.01:0,6,64	0/1:14,0:12:92:149,0,92	1/1:21,0:14:23.94:337,24,0	0/0:28,0:24:12.04:0,12,240	0/1:21,0:17:15.95:16,0,443	0/1:18,0:18:18.61:361,0,19	1/1:14,0:4:5.42:63,5,0	1/1:16,0:16:8.75:52,9,0	0/1:6,0:5:10.15:10,0,84	0/0:9,0:8:5.99:0,6,51	0/1:13,0:10:42.26:42,0,119	0/0:23,0:20:26.88:0,27,295	0/0:20,0:17:8.97:0,9,116	0/1:15,0:12:22.76:190,0,23	0/1:20,0:16:68.15:68,0,96	0/0:7,0:2:3.01:0,3,36
chr10	6974946	.	GAAAGAAAGAAAGAAAGAAA	G	2426.01	PASS	AB=0.949;AC=24;AF=0.480;AN=50;BaseQRankSum=3.209;DP=427;FS=11.362;HRun=0;HaplotypeScore=140.9233;InbreedingCoeff=0.2291;MQ=34.51;MQ0=44;MQRankSum=-1.475;QD=9.37;ReadPosRankSum=0.054;VQSLOD=1.4450;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:28:30.09:0,30,505	1/1:9,0:8:18.06:420,18,0	./.	./.	0/1:7,16:22:7.17:58,0,7	./.	0/1:18,0:12:26.54:27,0,73	1/1:6,0:2:6.02:87,6,0	0/0:15,0:13:3:0,3,27	1/1:20,0:19:30.11:376,30,0	1/1:8,0:7:12.04:169,12,0	1/1:21,0:18:3.01:80,3,0	0/0:11,0:10:2.96:0,3,19	0/1:15,0:13:3.47:216,0,3	1/1:20,0:13:12.03:194,12,0	0/0:28,0:24:11.93:0,12,147	0/1:21,0:17:28.75:29,0,260	0/1:19,0:19:8.96:238,0,9	1/1:13,0:3:5.97:87,6,0	1/1:16,0:16:9.03:110,9,0	0/0:6,0:5:11.79:0,12,99	0/0:9,0:8:1.25:0,1,3	0/1:14,0:11:5.52:127,0,6	0/0:21,0:19:13.96:0,14,137	0/0:23,0:20:2.81:0,3,40	0/1:15,0:12:1.93:251,0,2	0/1:21,0:17:16.26:116,0,16	0/0:8,0:2:2.94:0,3,18
chr10	6974962	.	GAAA	G	3880.18	PASS	AB=0.895;AC=38;AF=0.905;AN=42;BaseQRankSum=0.016;DP=409;FS=13.360;HRun=6;HaplotypeScore=81.2022;InbreedingCoeff=0.1052;MQ=31.48;MQ0=44;MQRankSum=0.698;QD=11.45;ReadPosRankSum=-0.621;VQSLOD=-0.4785;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:31,0:28:4.46:4,0,449	1/1:14,0:12:36.08:478,36,0	./.	./.	1/1:20,0:19:9.01:97,9,0	./.	1/1:16,0:10:13.29:177,13,0	1/1:9,0:3:9.03:131,9,0	./.	1/1:17,0:16:17.26:213,17,0	1/1:9,0:8:18.06:260,18,0	1/1:7,11:14:3.01:47,3,0	./.	1/1:16,0:14:30.10:435,30,0	1/1:16,0:7:12.01:152,12,0	./.	1/1:15,5:16:29.94:378,30,0	1/1:14,0:14:15.52:207,16,0	1/1:6,5:5:12.04:177,12,0	1/1:1,17:18:9.03:136,9,0	0/1:5,0:4:41.06:41,0,45	0/1:3,8:10:0:0,0,0	1/1:15,0:11:17.97:233,18,0	0/1:22,0:19:26.90:162,0,27	1/1:4,23:24:6.02:85,6,0	1/1:13,0:12:18.02:238,18,0	1/1:13,0:11:20.87:229,21,0	./.
chr10	6974965	.	A	AG	3921.67	PASS	AB=0.753;AC=37;AF=0.925;AN=40;BaseQRankSum=0.102;DP=398;FS=12.379;HRun=0;HaplotypeScore=78.2273;InbreedingCoeff=-0.1164;MQ=31.54;MQ0=41;MQRankSum=-3.252;QD=12.33;ReadPosRankSum=-1.271;VQSLOD=3.6445;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:28,2:27:30.08:30,0,441	1/1:3,12:14:36.09:466,36,0	./.	./.	1/1:19,2:19:9.03:134,9,0	./.	1/1:6,9:9:12.04:167,12,0	1/1:4,3:3:9.03:126,9,0	./.	1/1:16,1:16:17.41:212,17,0	1/1:1,11:11:18.06:250,18,0	1/1:14,3:14:3:29,3,0	./.	1/1:2,11:12:30.10:417,30,0	1/1:3,11:7:12.02:149,12,0	./.	1/1:17,3:17:30.01:354,30,0	1/1:7,6:13:9.26:203,9,0	1/1:8,0:5:12.03:156,12,0	1/1:20,0:20:9.02:97,9,0	0/1:3,2:4:42.28:79,0,42	./.	1/1:3,8:7:17.97:224,18,0	0/1:7,13:17:17.32:253,0,17	1/1:26,1:24:6.02:86,6,0	1/1:7,6:11:21:260,21,0	1/1:11,4:11:20.83:228,21,0	./.
chr10	6974974	.	AAAGGAAGG	A	2987.90	PASS	AB=0.930;AC=41;AF=0.891;AN=46;BaseQRankSum=-1.598;DP=425;FS=1.855;HRun=0;HaplotypeScore=121.9343;InbreedingCoeff=0.1154;MQ=30.39;MQ0=40;MQRankSum=0.514;QD=7.84;ReadPosRankSum=1.089;VQSLOD=2.2760;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:22,8:27:7.66:553,0,8	1/1:14,0:12:23.84:306,24,0	./.	./.	1/1:24,0:22:8.79:69,9,0	./.	0/1:15,0:10:0.24:35,0,0	1/1:10,0:6:5.99:61,6,0	1/1:15,0:13:3.87:25,4,0	1/1:20,0:18:17.67:163,18,0	1/1:12,0:11:6.82:197,7,0	./.	1/1:11,0:8:2.68:41,3,0	1/1:14,0:13:33.10:420,33,0	1/1:18,0:10:22.05:217,22,0	1/1:27,0:24:9.01:103,9,0	1/1:21,0:17:0.67:2,1,0	1/1:12,0:12:8.39:89,8,0	1/1:8,0:5:3.01:40,3,0	1/1:22,0:22:1.50:51,2,0	0/0:5,0:4:3.01:0,3,55	1/1:15,0:13:4.74:56,5,0	1/1:12,0:7:14.26:153,14,0	0/1:19,0:16:4.47:31,0,4	1/1:30,0:25:7.51:57,8,0	1/1:14,0:11:12.74:198,13,0	1/1:18,0:13:18.71:222,19,0	./.
chr10	6975074	.	C	CAT	1572.31	PASS	AB=1.000;AC=37;AF=0.712;AN=52;BaseQRankSum=4.513;DP=410;FS=1.735;HRun=0;HaplotypeScore=172.4944;InbreedingCoeff=0.2284;MQ=46.20;MQ0=1;MQRankSum=-2.608;QD=4.74;ReadPosRankSum=7.014;VQSLOD=2.6757;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:49.71:0,50,662	./.	0/0:23,0:18:33.09:0,33,447	0/0:11,0:9:11.15:0,11,165	1/1:17,0:9:1.82:5,2,0	1/1:16,0:15:19.34:170,19,0	0/1:10,0:10:9.40:29,0,9	0/1:22,0:19:21.51:22,0,22	0/1:10,0:9:3.93:15,0,4	0/1:22,0:15:0.94:69,0,1	1/1:19,0:8:4.29:62,4,0	1/1:17,0:17:10.36:181,10,0	0/1:15,0:14:19.04:19,0,29	1/1:14,0:13:4.32:53,4,0	0/1:21,0:20:8.90:103,0,9	1/1:17,0:15:7.16:80,7,0	0/0:6,0:5:2.62:0,3,11	1/1:7,0:6:5.87:39,6,0	1/1:4,0:4:0.67:16,1,0	1/1:23,0:16:7.47:90,7,0	./.	1/1:20,0:11:14.48:148,14,0	0/1:17,0:11:3.32:9,0,3	1/1:3,0:2:2.97:20,3,0	1/1:14,0:13:11.85:80,12,0	1/1:16,5:21:19.89:204,20,0	1/1:7,8:15:17.52:243,18,0	1/1:5,3:7:6.02:68,6,0
chr10	6975076	.	T	TA	2524.13	PASS	AB=0.643;AC=25;AF=0.481;AN=52;BaseQRankSum=3.996;DP=398;FS=0.000;HRun=1;HaplotypeScore=164.8339;InbreedingCoeff=-0.0597;MQ=46.33;MQ0=1;MQRankSum=-4.597;QD=8.98;ReadPosRankSum=3.261;VQSLOD=1.2883;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:32:43.88:0,44,636	./.	0/0:22,0:17:36.12:0,36,471	0/0:11,0:9:13.71:0,14,207	1/1:10,7:9:3.01:45,3,0	0/1:3,13:15:5.75:215,0,6	1/1:4,6:10:12:107,12,0	0/1:18,2:17:58.50:372,0,58	0/1:5,4:8:29.72:49,0,30	0/1:8,13:15:5.71:320,0,6	0/1:5,14:8:23.36:90,0,23	0/1:1,15:16:73.93:243,0,74	0/1:6,9:14:77.24:77,0,130	1/1:9,5:13:17.92:147,18,0	0/1:7,14:20:99:185,0,116	0/1:7,10:15:14.81:179,0,15	0/0:5,1:5:2.94:0,3,39	1/1:3,4:6:7.82:57,8,0	0/1:2,1:3:11.49:21,0,11	0/1:12,11:16:14.80:144,0,15	./.	0/1:4,15:11:11.72:173,0,12	0/1:8,9:11:29.45:65,0,29	1/1:2,1:2:2.99:24,3,0	1/1:2,12:13:23.79:180,24,0	0/0:19,0:19:35.32:0,35,308	0/0:14,0:14:24.64:0,25,152	0/0:8,0:7:8.50:0,8,60
chr10	6975077	.	ATACTC	A	1400.09	PASS	AB=0.858;AC=20;AF=0.385;AN=52;BaseQRankSum=-2.842;DP=377;FS=12.479;HRun=0;HaplotypeScore=169.7957;InbreedingCoeff=-0.2995;MQ=47.05;MQ0=1;MQRankSum=-3.109;QD=5.81;ReadPosRankSum=-3.665;VQSLOD=0.6262;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:53.72:0,54,1616	./.	0/0:23,0:18:38.06:0,38,1055	0/0:11,0:9:17.80:0,18,458	1/1:12,3:7:3.01:45,3,0	0/0:14,2:15:13.06:0,13,266	0/1:8,2:10:41.66:126,0,42	0/1:8,11:16:46.53:568,0,47	0/1:5,3:7:54.98:55,0,63	0/1:16,3:13:99:231,0,102	0/1:17,2:8:12.43:12,0,38	0/1:16,0:16:52:52,0,91	0/1:12,3:14:99:122,0,135	1/1:6,6:11:6.79:109,7,0	0/1:14,4:17:16.75:17,0,101	0/1:13,0:11:46.63:47,0,89	0/0:5,0:4:2.95:0,3,46	0/1:5,1:6:11.36:11,0,22	0/0:3,0:3:1.06:0,1,22	0/1:14,5:12:17.73:18,0,123	./.	0/1:18,0:10:16.34:16,0,24	0/1:14,2:10:35.59:56,0,36	1/1:3,0:2:0.89:2,1,0	0/1:13,1:13:58.04:62,0,58	0/0:16,0:19:3.34:0,3,232	0/0:14,0:14:24.07:0,24,295	0/0:8,0:7:9.03:0,9,114
chr10	6975079	.	ACT	A	977.50	PASS	AB=0.885;AC=36;AF=0.720;AN=50;BaseQRankSum=4.658;DP=372;FS=1.693;HRun=0;HaplotypeScore=162.0547;InbreedingCoeff=0.2851;MQ=46.88;MQ0=2;MQRankSum=-3.062;QD=3.44;ReadPosRankSum=7.006;VQSLOD=2.3631;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:50.89:0,51,941	./.	0/0:22,0:17:35.54:0,36,607	0/0:11,0:9:17.78:0,18,263	./.	1/1:14,2:15:9.02:49,9,0	1/1:7,1:8:10.43:63,10,0	1/1:18,1:16:15.29:166,15,0	0/1:7,1:7:5.77:31,0,6	1/1:13,5:12:10.10:127,10,0	0/1:18,1:8:0.24:38,0,0	0/1:14,2:16:0.58:110,0,1	0/1:12,3:14:30.70:42,0,31	1/1:11,1:11:8.80:42,9,0	0/1:17,1:17:16.06:46,0,16	1/1:10,3:11:3.96:51,4,0	0/0:5,0:4:2.55:0,3,13	1/1:7,0:6:7.83:32,8,0	1/1:5,0:4:4.23:15,4,0	1/1:18,1:12:0.53:24,1,0	./.	1/1:16,2:10:7.87:52,8,0	0/1:12,4:10:7.99:24,0,8	1/1:3,0:2:2.04:6,2,0	1/1:9,5:13:8.88:28,9,0	1/1:18,0:19:21.19:141,21,0	1/1:14,0:14:9.89:33,10,0	1/1:7,0:7:3.11:8,3,0
chr10	6975081	.	T	TATATA	5000.36	PASS	AB=0.766;AC=37;AF=0.712;AN=52;BaseQRankSum=3.462;DP=382;FS=6.579;HRun=0;HaplotypeScore=163.1914;InbreedingCoeff=0.2365;MQ=47.86;MQ0=2;MQRankSum=-4.675;QD=16.23;ReadPosRankSum=8.284;VQSLOD=3.2086;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:48.04:0,48,1081	./.	0/0:21,0:16:35.76:0,36,698	0/0:12,0:10:5.81:0,6,298	0/1:11,4:7:0:0,0,0	1/1:5,11:15:18.30:527,18,0	1/1:5,3:8:3.97:116,4,0	0/1:19,1:17:5.13:97,0,5	0/1:5,3:7:2.77:94,0,3	1/1:14,6:14:14.78:369,15,0	1/1:6,13:8:3.34:220,3,0	1/1:3,13:16:6.78:614,7,0	0/1:10,5:14:28.57:93,0,29	1/1:8,4:11:9:176,9,0	0/1:5,13:17:14.06:382,0,14	1/1:9,7:13:6.15:246,6,0	0/0:4,1:4:2.74:0,3,12	1/1:3,4:6:5.58:123,6,0	1/1:5,1:5:8.84:98,9,0	1/1:10,10:12:6.26:290,6,0	./.	1/1:5,14:11:13.41:455,13,0	0/1:12,4:10:5.78:46,0,6	1/1:2,1:2:3.01:58,3,0	1/1:7,7:13:12.04:239,12,0	0/1:13,1:19:27.98:309,0,28	1/1:6,0:14:9.32:345,9,0	1/1:4,0:7:6.02:102,6,0
chr10	6975121	.	TATACAC	T	4029.08	PASS	AC=38;AF=0.864;AN=44;BaseQRankSum=4.435;DP=281;FS=28.497;HRun=0;HaplotypeScore=117.2929;InbreedingCoeff=0.4442;MQ=43.42;MQ0=10;MQRankSum=-4.274;QD=19.28;ReadPosRankSum=1.108;VQSLOD=1.4192;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:38.41:0,38,1331	1/1:1,4:4:5.93:90,6,0	0/0:13,0:9:6.26:0,6,372	0/0:4,0:2:3.01:0,3,31	1/1:1,12:10:5.99:143,6,0	1/1:6,9:14:5.93:90,6,0	./.	1/1:19,9:19:29.97:392,30,0	./.	1/1:7,10:16:39.04:802,39,0	1/1:6,10:8:9.03:210,9,0	./.	1/1:2,7:8:9.03:196,9,0	1/1:1,2:2:3.01:69,3,0	./.	1/1:4,7:7:6.02:128,6,0	1/1:4,0:3:2.92:17,3,0	1/1:5,0:4:5.77:33,6,0	1/1:4,0:3:2.97:20,3,0	1/1:8,13:10:18.06:390,18,0	./.	1/1:5,6:8:3.01:73,3,0	1/1:4,10:9:6.02:119,6,0	./.	1/1:1,6:7:9.03:220,9,0	1/1:4,15:19:48.03:926,48,0	1/1:2,3:4:5.91:38,6,0	1/1:0,1:1:3.01:73,3,0
chr10	6975249	.	ATATAT	A	297.37	PASS	AB=0.929;AC=9;AF=0.250;AN=36;BaseQRankSum=1.805;DP=220;FS=16.408;HRun=0;HaplotypeScore=54.1611;InbreedingCoeff=-0.0083;MQ=18.27;MQ0=108;MQRankSum=-0.205;QD=4.31;ReadPosRankSum=0.811;VQSLOD=0.1420;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:13:2.99:3,0,244	0/0:2,0:1:3.01:0,3,95	./.	./.	0/0:16,0:4:5.98:0,6,113	0/0:3,0:1:2.94:0,3,18	./.	0/0:29,0:5:15.05:0,15,430	1/1:2,2:3:8.24:133,8,0	0/0:7,0:1:0.47:0,0,1	0/0:10,0:7:4.26:0,4,96	./.	0/1:7,0:3:16.29:16,0,19	1/1:3,1:1:0.47:1,0,0	0/0:12,0:4:4.61:0,5,18	0/1:10,2:5:15.29:115,0,15	./.	0/1:7,1:4:62.95:63,0,74	./.	0/0:19,0:9:9.03:0,9,284	./.	./.	0/0:9,0:2:5.98:0,6,110	./.	./.	0/0:7,0:2:5.98:0,6,86	0/1:8,1:7:72.16:72,0,146	0/0:3,0:1:2.99:0,3,23
chr10	6975255	.	A	AC	55.10	PASS	AB=0.972;AC=8;AF=0.211;AN=38;BaseQRankSum=2.455;DP=220;FS=17.813;HRun=0;HaplotypeScore=60.4457;InbreedingCoeff=0.1514;MQ=18.10;MQ0=107;MQRankSum=-0.243;QD=1.20;ReadPosRankSum=2.632;VQSLOD=-0.1138;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,1:14:25.70:0,26,224	0/0:2,0:1:3.01:0,3,42	./.	./.	0/0:14,0:4:5.98:0,6,62	0/0:3,0:1:2.22:0,2,7	0/0:3,1:2:1.82:0,2,5	0/0:28,2:5:15.05:0,15,209	1/1:3,1:3:8.36:48,8,0	0/0:6,0:1:0.47:0,0,1	0/0:10,0:7:3.01:0,3,42	./.	1/1:7,0:3:0.52:15,1,0	0/0:4,0:1:0:0,0,0	0/0:12,0:4:4.31:0,4,11	0/1:12,0:5:1.67:12,0,2	0/0:6,0:2:2.50:0,2,9	0/1:7,1:4:32.91:33,0,33	./.	0/0:18,0:9:9.03:0,9,126	./.	./.	0/0:9,0:2:5.98:0,6,62	./.	./.	0/1:6,0:2:11.50:12,0,35	0/1:9,0:7:43.26:43,0,71	./.
chr10	6975266	.	TCATA	T	225.41	PASS	AB=0.881;AC=12;AF=0.462;AN=26;BaseQRankSum=-1.271;DP=214;FS=1.569;HRun=0;HaplotypeScore=60.3517;InbreedingCoeff=0.1435;MQ=18.57;MQ0=106;MQRankSum=-0.887;QD=2.30;ReadPosRankSum=0.120;VQSLOD=1.5442;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:18:3.52:4,0,186	./.	./.	./.	./.	0/0:1,2:1:0:0,0,0	./.	1/1:24,6:5:15.05:254,15,0	0/1:4,0:3:7.49:10,0,7	0/0:2,4:1:0:0,0,0	./.	./.	0/1:3,4:3:1.15:8,0,1	1/1:2,2:1:0.47:1,0,0	0/0:7,5:4:0:0,0,0	1/1:7,5:5:5.84:19,6,0	1/1:3,2:1:0.89:2,1,0	0/0:4,4:4:3.02:0,3,78	./.	./.	./.	./.	./.	./.	./.	0/0:3,3:2:1.77:0,2,26	0/1:7,1:7:12.55:15,0,13	./.
chr10	6975276	.	A	ATACG	51.32	PASS	AB=0.969;AC=6;AF=0.231;AN=26;BaseQRankSum=-2.480;DP=205;FS=8.475;HRun=0;HaplotypeScore=64.1837;InbreedingCoeff=0.2820;MQ=19.31;MQ0=98;MQRankSum=1.393;QD=0.92;ReadPosRankSum=-2.751;VQSLOD=-0.1613;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:21:11.80:0,12,193	./.	./.	./.	./.	./.	0/0:4,0:2:0:0,0,0	0/1:26,0:5:55.71:56,0,56	0/0:4,0:3:6.90:0,7,61	0/1:6,0:1:0:0,0,0	./.	./.	0/1:6,1:3:2.13:45,0,2	0/0:5,0:2:0:0,0,0	0/1:12,0:4:0.01:0,0,0	0/0:12,0:5:5.82:0,6,59	1/1:5,0:1:3.01:35,3,0	0/0:8,0:4:6.49:0,6,95	./.	./.	./.	./.	./.	./.	./.	0/0:6,0:2:5.84:0,6,34	0/0:8,0:7:10.53:0,11,86	./.
chr10	6975314	.	A	AC	49.45	PASS	AB=0.778;AC=10;AF=0.455;AN=22;BaseQRankSum=1.519;DP=104;FS=1.922;HRun=0;HaplotypeScore=64.4429;InbreedingCoeff=0.1376;MQ=41.09;MQ0=26;MQRankSum=0.527;QD=1.05;ReadPosRankSum=2.326;VQSLOD=1.6084;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:28,2:23:12.87:13,0,43	./.	./.	0/0:9,0:3:4.31:0,4,70	./.	./.	./.	./.	0/0:1,0:2:2.97:0,3,20	./.	./.	1/1:1,0:1:2.74:12,3,0	1/1:2,0:2:5.94:41,6,0	0/0:2,0:2:5.91:0,6,44	1/1:2,2:3:1.28:9,1,0	0/0:3,1:2:2.97:0,3,20	1/1:0,0:1:2.68:11,3,0	0/0:1,1:1:3.01:0,3,39	./.	./.	./.	./.	./.	./.	./.	./.	0/1:2,2:4:34.36:58,0,34	./.
chr10	6975319	.	ATACACT	A	180.78	PASS	AB=0.973;AC=10;AF=0.500;AN=20;BaseQRankSum=-0.618;DP=93;FS=0.000;HRun=0;HaplotypeScore=61.3475;InbreedingCoeff=0.1745;MQ=43.39;MQ0=14;MQRankSum=1.060;QD=2.96;ReadPosRankSum=0.971;VQSLOD=1.2482;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:33,2:27:16.38:76,0,16	./.	0/1:17,0:1:0:0,0,0	0/0:10,0:3:0.30:0,0,69	./.	./.	./.	./.	0/0:2,0:2:1.55:0,2,4	./.	./.	1/1:1,0:1:3.01:34,3,0	0/0:1,1:2:0.47:0,0,1	1/1:0,1:1:3.01:70,3,0	1/1:5,0:3:2.71:32,3,0	./.	1/1:2,0:2:5.88:48,6,0	./.	./.	./.	./.	./.	./.	./.	./.	./.	0/0:2,0:2:1.36:0,1,3	./.
chr10	6975384	.	TCATA	T	120.56	PASS	AB=0.864;AC=9;AF=0.409;AN=22;BaseQRankSum=1.079;DP=283;FS=0.000;HRun=0;HaplotypeScore=48.3790;InbreedingCoeff=0.3975;MQ=15.27;MQ0=188;MQRankSum=1.373;QD=2.01;ReadPosRankSum=-0.049;VQSLOD=0.6073;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:17:5.38:0,5,87	./.	./.	./.	./.	./.	./.	0/0:31,0:7:21.07:0,21,426	./.	./.	./.	./.	0/0:10,0:1:1.25:0,1,3	0/0:6,1:2:6.02:0,6,87	0/0:8,3:4:9.03:0,9,149	./.	1/1:7,6:4:7.45:68,7,0	1/1:11,4:5:3.01:54,3,0	0/0:8,1:3:6.02:0,6,127	./.	1/1:5,1:2:3.01:54,3,0	./.	./.	./.	./.	0/1:16,3:7:33.31:33,0,356	1/1:6,1:1:2.60:10,3,0	./.
chr10	6975394	.	A	ATACG	358.75	PASS	AB=0.923;AC=5;AF=0.208;AN=24;BaseQRankSum=1.657;DP=294;FS=12.291;HRun=0;HaplotypeScore=43.1953;InbreedingCoeff=0.3444;MQ=14.64;MQ0=200;MQRankSum=1.144;QD=11.57;ReadPosRankSum=0.490;VQSLOD=1.1055;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:16:7.19:0,7,85	./.	./.	./.	./.	./.	./.	0/0:28,0:8:24.07:0,24,451	0/0:9,0:1:0.89:0,1,2	./.	./.	./.	0/0:11,0:1:2.60:0,3,10	1/1:6,2:2:6.02:167,6,0	1/1:8,3:3:9.03:255,9,0	./.	0/1:11,1:3:32.12:32,0,50	0/0:16,0:5:3:0,3,28	0/0:11,0:3:6.02:0,6,125	./.	0/0:6,0:2:3.01:0,3,36	./.	./.	./.	./.	0/0:22,0:7:21.07:0,21,401	0/0:11,0:1:2.92:0,3,17	./.
chr10	6975415	.	T	TAC	121.09	PASS	AC=6;AF=0.250;AN=24;BaseQRankSum=3.095;DP=408;FS=22.252;HRun=0;HaplotypeScore=44.8431;InbreedingCoeff=0.5634;MQ=15.98;MQ0=255;MQRankSum=1.152;QD=2.52;ReadPosRankSum=0.113;VQSLOD=0.0220;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:9:3.01:0,3,46	./.	./.	./.	./.	./.	./.	0/0:28,1:7:21.07:0,21,316	./.	./.	./.	./.	0/0:15,0:3:2.04:0,2,6	1/1:10,1:3:6.01:62,6,0	1/1:17,3:6:9.03:136,9,0	./.	0/0:16,0:3:5.75:0,6,58	0/0:23,0:9:9.03:0,9,119	0/0:16,0:5:9:0,9,113	./.	0/0:10,0:3:3.01:0,3,46	./.	./.	./.	./.	0/0:28,0:9:21.07:0,21,315	1/1:17,0:2:2.98:22,3,0	0/0:17,0:6:9:0,9,93
chr10	6975422	.	A	ACG	79.37	PASS	AC=4;AF=0.133;AN=30;BaseQRankSum=2.612;DP=448;FS=9.303;HRun=0;HaplotypeScore=58.0282;InbreedingCoeff=0.4090;MQ=18.52;MQ0=258;MQRankSum=-0.618;QD=2.41;ReadPosRankSum=0.219;VQSLOD=0.3068;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:12:11.92:0,12,89	./.	./.	./.	./.	./.	./.	0/0:24,0:5:15.05:0,15,244	./.	0/0:27,0:3:2.97:0,3,20	0/0:10,0:4:2.99:0,3,24	./.	0/0:16,0:4:3:0,3,27	1/1:9,1:2:3:28,3,0	1/1:20,3:9:9.03:142,9,0	./.	0/0:19,0:6:5.61:0,6,59	0/0:27,0:12:11.99:0,12,143	0/0:17,0:6:15.05:0,15,224	0/0:9,0:5:3.01:0,3,46	0/0:10,0:3:3.01:0,3,48	./.	./.	./.	./.	0/0:30,0:11:29.94:0,30,393	0/0:18,0:3:2.68:0,3,11	0/0:21,0:9:15:0,15,184
chr10	6975443	.	TCATA	T	4947.94	PASS	AB=0.634;AC=47;AF=0.904;AN=52;BaseQRankSum=0.206;DP=433;FS=20.855;HRun=0;HaplotypeScore=49.7801;InbreedingCoeff=0.3639;MQ=24.71;MQ0=190;MQRankSum=0.059;QD=14.06;ReadPosRankSum=1.542;VQSLOD=2.5482;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:20:25.33:0,25,505	1/1:0,4:3:9.03:163,9,0	./.	./.	1/1:5,13:8:8.61:126,9,0	1/1:5,9:8:12.04:217,12,0	1/1:5,0:1:3:27,3,0	0/0:19,0:1:2.99:0,3,24	1/1:6,6:7:15.05:272,15,0	0/1:11,15:10:99:328,0,99	1/1:3,10:8:12.04:214,12,0	1/1:6,5:4:5.95:72,6,0	1/1:4,8:4:9.03:161,9,0	1/1:7,2:2:6.02:100,6,0	1/1:3,17:11:21.07:376,21,0	1/1:4,16:12:12.04:216,12,0	1/1:11,5:10:23.84:286,24,0	1/1:6,14:13:21.07:364,21,0	1/1:2,9:5:12.04:211,12,0	1/1:2,12:11:9.03:161,9,0	1/1:3,8:4:3.01:54,3,0	1/1:3,4:3:6.02:109,6,0	1/1:6,8:5:11.90:143,12,0	1/1:5,6:4:3.01:54,3,0	1/1:8,8:9:6.02:104,6,0	1/1:8,23:16:41.10:630,41,0	1/1:7,10:6:12.01:179,12,0	1/1:9,11:9:21.07:381,21,0
chr10	6975576	.	C	CAT	387.80	PASS	AB=0.742;AC=8;AF=0.174;AN=46;BaseQRankSum=1.840;DP=215;FS=30.615;HRun=0;HaplotypeScore=74.0184;InbreedingCoeff=0.1406;MQ=39.40;MQ0=21;MQRankSum=-2.431;QD=7.91;ReadPosRankSum=-2.111;VQSLOD=0.9588;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:47.55:0,48,895	0/0:1,1:2:3.01:0,3,45	0/0:14,0:4:12.04:0,12,167	0/0:6,0:3:2.94:0,3,46	0/1:0,2:2:0:0,0,0	0/0:7,1:7:3.01:0,3,45	0/0:4,1:4:3.01:0,3,46	0/1:17,5:17:99:223,0,328	0/1:12,2:14:85.29:85,0,121	0/0:6,0:3:6.02:0,6,86	./.	1/1:1,1:1:3.01:53,3,0	0/0:0,3:1:0:0,0,0	./.	0/0:2,3:3:3.01:0,3,46	0/0:12,7:16:6.01:0,6,90	0/0:5,0:5:6.02:0,6,90	0/0:3,0:3:6.02:0,6,92	0/0:11,0:8:21:0,21,263	0/0:6,0:4:9.01:0,9,100	./.	./.	1/1:1,1:1:3.01:49,3,0	./.	0/0:6,0:6:3.01:0,3,45	0/0:8,0:7:17.97:0,18,211	0/0:9,2:9:18.06:0,18,271	0/1:5,2:7:76.74:89,0,77
chr10	6975600	.	TAATAC	T	96.19	PASS	AB=0.979;AC=7;AF=0.167;AN=42;BaseQRankSum=2.419;DP=228;FS=0.000;HRun=0;HaplotypeScore=64.8631;InbreedingCoeff=0.1196;MQ=32.91;MQ0=84;MQRankSum=-1.471;QD=1.28;ReadPosRankSum=0.109;VQSLOD=0.9517;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:35,0:31:10.36:10,0,908	0/0:3,0:2:2.90:0,3,93	0/0:15,0:3:9.03:0,9,236	0/0:10,0:3:2.99:0,3,88	0/1:6,0:2:0:0,0,0	./.	0/0:6,0:2:3.01:0,3,91	0/1:15,2:10:99:110,0,417	0/0:8,1:9:12.87:0,13,332	0/0:11,0:2:3.01:0,3,96	0/0:5,0:2:6.02:0,6,67	./.	0/1:7,0:1:0:0,0,0	./.	0/0:9,1:4:2.99:0,3,93	0/0:19,1:13:8.38:0,8,268	0/0:7,0:4:6.02:0,6,69	1/1:1,2:3:3.01:67,3,0	0/0:6,0:3:6.02:0,6,191	./.	./.	./.	0/1:7,0:2:0:0,0,0	./.	0/0:5,1:3:6.02:0,6,138	0/0:3,1:2:5.99:0,6,117	0/0:6,0:4:6.02:0,6,138	0/0:3,0:2:2.96:0,3,94
chr10	6975638	.	ACAC	A	144.40	PASS	AB=0.931;AC=12;AF=0.375;AN=32;BaseQRankSum=4.197;DP=324;FS=2.289;HRun=0;HaplotypeScore=79.3085;InbreedingCoeff=-0.2947;MQ=19.81;MQ0=177;MQRankSum=-1.825;QD=0.87;ReadPosRankSum=1.500;VQSLOD=1.6832;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:32,0:26:7.35:7,0,321	0/0:3,0:2:2.96:0,3,74	./.	./.	0/1:10,0:1:0:0,0,0	./.	./.	0/0:24,0:12:21.87:0,22,316	0/1:12,1:10:11.95:12,0,350	0/1:21,1:5:24.38:24,0,139	0/0:12,0:5:6.02:0,6,129	./.	0/1:9,0:1:0:0,0,0	./.	0/0:8,1:3:2.99:0,3,74	0/1:20,2:16:28.06:28,0,138	1/1:8,4:4:3.01:36,3,0	./.	0/1:8,3:6:63.29:75,0,63	./.	./.	./.	./.	./.	0/1:8,1:3:23.99:24,0,68	0/1:13,1:5:17.40:17,0,111	0/1:10,1:9:12.69:25,0,13	0/0:14,0:2:2.98:0,3,21
chr10	6975641	.	CAT	C	182.13	PASS	AB=0.850;AC=7;AF=0.219;AN=32;BaseQRankSum=-0.057;DP=329;FS=3.115;HRun=0;HaplotypeScore=78.8091;InbreedingCoeff=0.3852;MQ=19.90;MQ0=182;MQRankSum=0.989;QD=2.19;ReadPosRankSum=-1.830;VQSLOD=1.4535;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:35,0:27:43.76:44,0,205	0/0:3,0:2:3.01:0,3,57	./.	./.	0/0:10,0:1:0:0,0,0	./.	./.	0/0:23,0:12:24.08:0,24,353	0/0:14,0:11:16.61:0,17,290	0/0:24,0:5:7.27:0,7,118	0/0:12,0:5:6.02:0,6,109	./.	0/1:9,0:1:0:0,0,0	./.	0/0:10,0:3:5.95:0,6,76	0/0:21,0:16:8.92:0,9,134	0/0:12,0:4:8.88:0,9,60	./.	0/0:11,0:6:15.70:0,16,150	./.	./.	./.	./.	./.	0/0:11,0:3:4.57:0,5,61	1/1:5,9:5:10.51:155,11,0	0/1:2,9:10:1.25:41,0,1	1/1:1,13:2:3.01:45,3,0
chr10	6975659	.	TACA	T	793.52	PASS	AB=0.935;AC=15;AF=0.395;AN=38;BaseQRankSum=4.576;DP=343;FS=0.000;HRun=0;HaplotypeScore=67.0463;InbreedingCoeff=-0.1231;MQ=19.32;MQ0=197;MQRankSum=-1.501;QD=4.01;ReadPosRankSum=3.308;VQSLOD=1.3181;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:21:12.82:13,0,163	0/0:3,0:2:2.92:0,3,68	./.	./.	0/0:11,0:1:2.97:0,3,20	./.	0/0:10,0:5:8.90:0,9,60	0/1:19,5:12:99:226,0,122	0/1:12,1:10:34.91:35,0,208	0/1:26,1:6:37.89:38,0,192	0/0:13,0:5:5.91:0,6,84	./.	0/1:9,0:1:0:0,0,0	./.	1/1:9,1:2:3.01:50,3,0	0/1:18,1:15:35.53:36,0,114	1/1:10,4:5:9.03:150,9,0	./.	1/1:6,5:6:15.05:250,15,0	0/0:13,0:3:5.93:0,6,40	./.	./.	0/0:14,0:3:5.93:0,6,40	./.	0/1:11,1:3:43.89:44,0,62	0/1:13,1:5:34.90:35,0,257	0/1:10,1:10:13.94:44,0,14	0/0:14,0:3:2.97:0,3,20
chr10	6975689	.	TACACAC	T	201.85	PASS	AB=0.883;AC=6;AF=0.158;AN=38;BaseQRankSum=3.997;DP=281;FS=0.000;HRun=0;HaplotypeScore=62.0118;InbreedingCoeff=0.3651;MQ=19.18;MQ0=170;MQRankSum=-0.444;QD=5.77;ReadPosRankSum=1.530;VQSLOD=0.6855;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:22:7.83:0,8,732	0/0:2,0:1:3.01:0,3,109	./.	./.	0/0:10,0:1:3.01:0,3,99	0/0:9,0:8:3.01:0,3,101	0/0:6,0:4:3.01:0,3,100	0/0:18,0:4:3.01:0,3,103	0/0:9,0:6:4.57:0,5,105	0/0:18,0:6:12.04:0,12,367	0/0:12,0:4:3.01:0,3,65	./.	./.	./.	0/1:5,1:1:0:0,0,0	0/0:10,0:8:6.02:0,6,210	1/1:9,2:3:6.49:91,6,0	./.	1/1:4,4:4:12.04:207,12,0	0/0:12,0:4:12.04:0,12,396	./.	./.	0/0:14,0:4:9.03:0,9,299	./.	0/1:9,1:2:0:0,0,0	0/0:13,0:5:12.04:0,12,404	0/0:10,0:9:3.01:0,3,101	0/0:12,0:2:3.01:0,3,104
chr10	6975767	.	ATACATT	A	114.07	PASS	AB=0.936;AC=8;AF=0.400;AN=20;BaseQRankSum=2.639;DP=165;FS=12.091;HRun=0;HaplotypeScore=41.5861;InbreedingCoeff=0.1210;MQ=15.64;MQ0=108;MQRankSum=-1.800;QD=2.28;ReadPosRankSum=1.620;VQSLOD=-0.0019;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:25,1:16:34.88:35,0,716	./.	./.	./.	0/0:11,0:3:3.01:0,3,70	./.	./.	./.	./.	./.	./.	0/0:9,0:2:5.99:0,6,74	./.	./.	./.	./.	1/1:5,2:2:3.01:54,3,0	./.	1/1:6,0:1:2.98:22,3,0	0/0:8,0:4:11.95:0,12,93	1/1:0,1:1:3.01:49,3,0	./.	0/0:6,0:1:3.01:0,3,40	./.	./.	0/0:6,0:1:3.01:0,3,39	0/1:9,1:2:47.45:47,0,102	./.
chr10	6975773	.	TCATA	T	235.46	PASS	AB=0.750;AC=11;AF=0.611;AN=18;BaseQRankSum=0.618;DP=164;FS=5.315;HRun=0;HaplotypeScore=39.6960;MQ=14.97;MQ0=108;MQRankSum=-1.943;QD=4.91;ReadPosRankSum=-1.766;VQSLOD=0.3755;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:15:5.62:0,6,313	./.	./.	./.	0/1:6,5:3:13.95:14,0,44	./.	./.	./.	./.	./.	./.	0/1:2,7:2:42.61:48,0,43	./.	./.	./.	./.	1/1:6,1:2:0.46:1,0,0	./.	1/1:3,3:1:0.47:1,0,0	1/1:3,5:4:12.04:217,12,0	0/1:1,0:1:0:0,0,0	./.	1/1:2,4:1:3.01:37,3,0	./.	./.	./.	0/0:6,4:2:2.08:0,2,67	./.
chr10	6975842	.	A	ATACG	755.28	PASS	AB=0.766;AC=23;AF=0.767;AN=30;BaseQRankSum=2.351;DP=109;FS=17.559;HRun=0;HaplotypeScore=39.0180;InbreedingCoeff=0.2428;MQ=23.24;MQ0=27;MQRankSum=-0.866;QD=12.38;ReadPosRankSum=2.351;VQSLOD=1.1356;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:9:8.83:0,9,72	./.	./.	0/0:11,0:2:6.02:0,6,110	0/1:5,3:6:0.01:0,0,0	./.	1/1:4,0:2:3:25,3,0	./.	./.	0/1:1,3:2:10.92:78,0,11	1/1:6,3:7:12.02:249,12,0	1/1:2,2:1:3:27,3,0	./.	1/1:1,1:2:3.01:85,3,0	1/1:2,2:2:3.01:85,3,0	./.	./.	1/1:3,0:2:2.96:19,3,0	./.	1/1:2,8:3:3.01:50,3,0	./.	1/1:0,1:1:3.01:85,3,0	1/1:2,4:6:3.01:85,3,0	./.	./.	1/1:0,1:1:3.01:67,3,0	./.	0/1:5,0:4:0:0,0,0
chr10	6975853	.	T	TATAC	653.94	PASS	AB=0.807;AC=15;AF=0.500;AN=30;BaseQRankSum=2.128;DP=133;FS=16.244;HRun=0;HaplotypeScore=61.3744;InbreedingCoeff=0.3889;MQ=25.78;MQ0=27;MQRankSum=-1.609;QD=12.34;ReadPosRankSum=3.944;VQSLOD=0.7571;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:15:20.90:0,21,309	./.	./.	0/0:10,0:2:6.02:0,6,88	0/1:7,5:10:0:0,0,0	./.	0/0:4,0:2:3.01:0,3,51	./.	./.	0/1:3,2:3:4.52:125,0,5	1/1:7,4:10:11.94:281,12,0	1/1:1,2:1:3.01:55,3,0	./.	1/1:1,1:2:3.01:75,3,0	1/1:1,3:2:3.01:75,3,0	./.	./.	./.	0/0:1,0:1:3.01:0,3,51	0/0:10,0:3:3:0,3,29	./.	1/1:3,1:4:3:75,3,0	1/1:4,3:7:2.94:75,3,0	./.	./.	0/0:4,0:4:5.05:0,5,43	./.	0/1:5,0:4:0:0,0,0
chr10	6975879	.	TAATAC	T	164.91	PASS	AB=0.764;AC=5;AF=0.119;AN=42;BaseQRankSum=4.488;DP=153;FS=9.760;HRun=0;HaplotypeScore=64.7446;InbreedingCoeff=0.0056;MQ=26.77;MQ0=37;MQRankSum=-1.833;QD=9.16;ReadPosRankSum=-2.048;VQSLOD=0.3917;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:22:50.68:0,51,1582	./.	0/0:15,0:2:5.99:0,6,118	0/0:10,0:3:9.03:0,9,287	0/0:6,3:8:5.05:0,5,34	0/0:2,0:1:3.01:0,3,38	0/0:3,0:2:3.01:0,3,97	0/0:18,0:3:9.03:0,9,291	0/0:1,0:1:3.01:0,3,39	0/1:6,1:6:99:127,0,175	0/0:10,1:11:23.48:0,23,189	0/0:3,0:2:5.98:0,6,66	./.	0/0:1,0:1:2.98:0,3,21	0/0:4,0:2:5.97:0,6,45	./.	./.	./.	0/0:5,0:1:3.01:0,3,97	0/0:8,0:3:8.94:0,9,73	./.	0/0:1,3:4:1.72:0,2,18	0/0:4,1:5:1.25:0,1,21	./.	0/1:2,1:3:0.52:1,0,14	0/1:2,2:4:95.10:95,0,181	1/1:4,0:2:5.23:39,5,0	0/0:5,0:4:9.03:0,9,161
chr10	6975880	.	A	AC	157.02	PASS	AB=0.885;AC=4;AF=0.095;AN=42;BaseQRankSum=3.184;DP=169;FS=7.086;HRun=0;HaplotypeScore=72.9803;InbreedingCoeff=0.0612;MQ=33.08;MQ0=36;MQRankSum=-1.309;QD=8.26;ReadPosRankSum=-1.449;VQSLOD=2.7726;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:19.15:0,19,643	./.	0/0:16,0:3:3.90:0,4,44	0/0:11,0:3:9.03:0,9,126	0/0:9,0:8:6.64:0,7,49	0/0:2,0:1:3.01:0,3,41	0/0:2,0:2:3.01:0,3,42	0/0:18,0:3:9.03:0,9,126	0/0:1,0:1:3.01:0,3,41	0/1:7,3:8:61.44:131,0,61	0/0:12,1:13:19.26:0,19,169	0/0:3,0:2:5.98:0,6,61	./.	0/0:2,0:1:2.98:0,3,21	0/0:4,0:2:5.98:0,6,56	./.	./.	./.	0/0:5,0:1:3.01:0,3,42	0/0:10,0:5:11.17:0,11,71	./.	0/0:5,0:5:5.46:0,5,30	0/0:6,0:6:5.48:0,5,44	./.	0/0:4,1:5:4.06:0,4,43	0/1:4,0:4:28.68:29,0,72	1/1:3,2:3:8.06:97,8,0	0/0:5,0:4:9.03:0,9,125
chr10	6975900	.	TAC	T	1352.08	PASS	AB=0.779;AC=22;AF=0.478;AN=46;BaseQRankSum=4.310;DP=211;FS=50.574;HRun=0;HaplotypeScore=90.7713;InbreedingCoeff=-0.0512;MQ=32.78;MQ0=27;MQRankSum=-1.696;QD=11.56;ReadPosRankSum=-5.602;VQSLOD=0.7039;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:27:63.17:0,63,1065	1/1:0,1:1:3.01:34,3,0	0/0:16,0:4:11.40:0,11,147	0/0:15,0:5:14.88:0,15,222	0/1:8,5:12:16.44:57,0,16	0/1:2,1:2:21.59:28,0,22	0/1:4,0:3:17.89:18,0,49	0/0:18,0:5:9.03:0,9,164	0/0:1,0:1:3.01:0,3,34	0/1:3,6:15:31.24:307,0,31	0/1:7,3:15:75.58:84,0,76	0/1:3,2:4:20.37:28,0,20	1/1:0,1:2:3.01:34,3,0	1/1:0,0:1:3.01:36,3,0	0/1:3,1:2:16.12:28,0,16	./.	./.	./.	0/0:6,0:1:3.01:0,3,55	0/1:7,3:10:24.51:173,0,25	./.	1/1:2,3:7:15.04:172,15,0	0/1:5,3:8:7.43:125,0,7	./.	1/1:2,4:8:5.50:218,5,0	0/1:2,2:4:54.09:54,0,95	1/1:2,4:6:12.74:105,13,0	0/0:5,0:4:8.51:0,9,84
chr10	6975908	.	C	CATAT	3209.28	PASS	AB=1.000;AC=34;AF=0.708;AN=48;BaseQRankSum=5.586;DP=271;FS=54.081;HRun=0;HaplotypeScore=108.1598;InbreedingCoeff=0.4080;MQ=36.76;MQ0=29;MQRankSum=-1.832;QD=16.80;ReadPosRankSum=-1.187;VQSLOD=1.0732;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:49.97:0,50,1095	1/1:2,0:2:6.01:77,6,0	0/0:17,0:7:20.09:0,20,135	0/0:16,0:5:13.29:0,13,230	1/1:18,0:16:6.49:100,6,0	1/1:3,0:2:3.48:51,3,0	0/1:6,0:5:12.04:80,0,12	0/1:19,0:8:35.01:35,0,56	0/0:3,0:2:0.47:0,0,1	1/1:13,8:19:32.15:956,32,0	1/1:15,5:18:7.55:135,8,0	1/1:9,0:7:8.95:104,9,0	1/1:1,1:2:3.01:51,3,0	1/1:2,2:2:3.01:44,3,0	1/1:6,0:3:3.48:51,3,0	./.	./.	./.	0/0:6,0:1:2.99:0,3,24	1/1:13,3:14:26.58:346,27,0	./.	1/1:6,2:8:15.05:236,15,0	1/1:11,1:10:12.51:197,13,0	0/1:4,0:2:0:0,0,0	1/1:11,2:12:27.53:383,28,0	0/1:8,0:7:8.07:157,0,8	1/1:10,3:9:18.04:298,18,0	1/1:6,0:5:8.64:58,9,0
chr10	6975914	.	TACAC	T	290.76	PASS	AB=0.936;AC=14;AF=0.304;AN=46;BaseQRankSum=0.914;DP=288;FS=8.946;HRun=0;HaplotypeScore=129.0629;InbreedingCoeff=-0.2115;MQ=36.27;MQ0=36;MQRankSum=-3.738;QD=2.19;ReadPosRankSum=-2.574;VQSLOD=1.4405;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:31:65.82:0,66,1668	0/0:2,0:2:6.02:0,6,100	0/0:17,0:7:14.47:0,14,140	0/0:14,0:5:15.04:0,15,279	0/1:18,1:17:26.62:27,0,53	0/1:3,0:2:25.75:30,0,26	0/0:6,0:5:9.03:0,9,169	0/0:14,0:6:6.02:0,6,131	1/1:3,0:2:3:28,3,0	0/0:22,0:20:11.02:0,11,719	0/1:20,2:20:58.71:115,0,59	0/1:8,1:6:27.17:27,0,87	0/0:2,0:2:3.01:0,3,32	0/0:5,0:2:2.98:0,3,22	0/1:6,1:3:24.88:30,0,25	./.	./.	./.	./.	0/1:21,0:17:38.17:38,0,324	./.	0/0:8,0:8:14.90:0,15,121	0/1:15,0:13:21.79:22,0,63	1/1:5,0:2:0.47:1,0,0	0/1:14,0:12:5.67:6,0,299	0/1:10,0:8:9.44:9,0,120	0/0:15,0:10:18.05:0,18,253	0/1:3,2:5:30.11:90,0,30
chr10	6975916	.	C	CATTA	1188.16	PASS	AB=0.916;AC=20;AF=0.417;AN=48;BaseQRankSum=3.330;DP=288;FS=19.968;HRun=0;HaplotypeScore=125.6386;InbreedingCoeff=0.0275;MQ=36.34;MQ0=39;MQRankSum=-4.583;QD=6.83;ReadPosRankSum=-0.492;VQSLOD=1.3946;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:31:52.04:0,52,1198	0/0:2,0:2:3.48:0,3,50	0/0:16,0:7:9.40:0,9,121	0/0:14,0:5:15.05:0,15,268	1/1:14,4:16:3.14:56,3,0	1/1:2,2:3:2.19:54,2,0	0/0:6,0:5:9.02:0,9,110	0/0:12,0:5:6.02:0,6,98	1/1:2,1:2:3.01:32,3,0	0/1:22,1:21:99:185,0,193	1/1:19,3:20:6.30:260,6,0	0/1:10,0:7:40.79:76,0,41	0/0:2,0:2:0.89:0,1,2	0/0:5,0:2:2.22:0,2,7	1/1:6,1:3:2.12:49,2,0	0/0:5,0:3:0:0,0,0	./.	./.	./.	0/1:20,2:17:99:137,0,152	./.	0/0:8,0:8:4.73:0,5,15	0/1:12,3:13:1.54:49,0,2	1/1:5,0:2:0.47:1,0,0	0/1:14,1:13:37.13:37,0,119	0/1:9,1:7:99:155,0,121	0/1:14,1:10:34.97:35,0,55	0/1:4,1:5:31.79:197,0,32
chr10	6975968	.	ACAC	A	467.67	PASS	AB=0.880;AC=11;AF=0.229;AN=48;BaseQRankSum=8.064;DP=512;FS=13.965;HRun=0;HaplotypeScore=148.7392;InbreedingCoeff=-0.2703;MQ=25.97;MQ0=158;MQRankSum=-2.162;QD=1.96;ReadPosRankSum=3.865;VQSLOD=1.9193;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:22:12.30:0,12,273	0/0:5,0:5:9.03:0,9,221	./.	./.	0/1:21,3:21:78.49:78,0,202	0/0:8,0:7:3.01:0,3,74	0/0:12,0:9:6.02:0,6,136	0/0:25,0:10:21.54:0,22,491	0/0:13,0:9:6.02:0,6,147	0/1:32,5:30:40.07:40,0,1707	0/1:24,3:21:73.13:73,0,344	0/0:22,0:14:11.94:0,12,295	0/0:17,0:10:5.89:0,6,147	0/0:20,0:8:6.02:0,6,147	0/0:32,0:20:12.04:0,12,295	0/0:21,0:15:5.52:0,6,147	./.	./.	0/0:8,0:3:9.03:0,9,185	0/1:31,5:27:99:123,0,551	0/0:13,0:6:3.01:0,3,74	0/1:7,2:9:26.30:26,0,68	0/1:13,5:16:99:124,0,197	1/1:14,0:7:0.47:1,0,0	0/1:22,1:18:23.28:23,0,139	0/1:18,4:15:87.73:88,0,213	0/1:28,1:23:16.67:17,0,127	0/0:11,0:3:2.99:0,3,24
chr10	6975971	.	CAT	C	545.80	PASS	AC=6;AF=0.130;AN=46;BaseQRankSum=-1.674;DP=511;FS=1.537;HRun=0;HaplotypeScore=144.1733;InbreedingCoeff=0.5327;MQ=25.90;MQ0=163;MQRankSum=0.942;QD=8.53;ReadPosRankSum=-0.918;VQSLOD=2.9240;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:21:10.28:0,10,175	0/0:5,0:5:9.03:0,9,173	./.	./.	0/0:24,0:21:9.83:0,10,174	0/0:8,0:7:3.01:0,3,57	0/0:12,0:9:6:0,6,72	0/0:24,0:10:21.05:0,21,367	0/0:15,0:11:6.02:0,6,115	0/0:37,0:31:77.89:0,78,1217	0/0:27,0:20:17.09:0,17,291	0/0:22,0:14:12.04:0,12,230	0/0:18,0:9:6.02:0,6,115	0/0:20,0:8:6.02:0,6,104	0/0:33,0:21:12.04:0,12,230	0/0:23,0:17:6.02:0,6,115	./.	./.	0/0:7,0:2:5.99:0,6,80	0/0:35,0:26:28.10:0,28,469	0/0:9,0:2:3.01:0,3,58	0/0:8,0:8:3.48:0,3,58	0/0:17,0:15:10.86:0,11,176	./.	0/0:24,0:18:6.91:0,7,118	1/1:8,15:16:26.25:434,26,0	1/1:10,20:24:14.02:187,14,0	1/1:3,8:3:3.01:46,3,0
chr10	6976071	.	T	TACATAC	15565.76	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-4.679;DP=594;FS=48.190;HRun=0;HaplotypeScore=121.5718;InbreedingCoeff=0.7254;MQ=49.42;MQ0=32;MQRankSum=-6.990;QD=32.36;ReadPosRankSum=3.826;VQSLOD=2.3973;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:40:74.70:0,75,1566	1/1:0,9:9:11.77:414,12,0	0/0:31,0:24:59.78:0,60,1043	0/0:19,0:11:20.19:0,20,384	1/1:5,28:34:6.02:207,6,0	1/1:1,13:19:12.51:415,13,0	1/1:2,13:17:5.58:207,6,0	1/1:8,25:30:78.24:2021,78,0	1/1:4,25:32:30.10:1035,30,0	1/1:5,23:28:48.10:1238,48,0	1/1:3,10:13:12.04:413,12,0	1/1:5,20:25:18.06:564,18,0	1/1:4,16:19:12.04:400,12,0	1/1:4,21:22:21.07:724,21,0	1/1:3,21:23:27.09:931,27,0	1/1:4,30:35:30.10:1035,30,0	1/1:2,5:7:9.03:310,9,0	1/1:1,3:6:6.02:207,6,0	1/1:3,4:7:15.05:469,15,0	1/1:5,14:18:27.09:876,27,0	0/0:2,4:7:0:0,0,0	1/1:0,12:12:9.03:310,9,0	1/1:13,12:23:36.12:1134,36,0	0/0:1,11:13:0.47:0,0,1	1/1:3,14:16:14.20:517,14,0	1/1:1,17:18:36.10:1002,36,0	1/1:2,23:24:30.10:1034,30,0	1/1:1,11:12:3.01:104,3,0
chr10	6976574	.	TCACTGTA	T	3814.83	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.625;DP=777;FS=3.267;HRun=0;HaplotypeScore=223.9429;InbreedingCoeff=0.9789;MQ=82.24;MQ0=0;MQRankSum=-10.238;QD=62.54;ReadPosRankSum=1.266;VQSLOD=3.6381;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,151,5553	0/0:20,0:20:54.19:0,54,2087	0/0:25,0:25:64.72:0,65,2235	0/0:29,0:29:54.06:0,54,2321	0/0:24,0:24:60.18:0,60,2092	0/0:24,0:24:57.20:0,57,2142	0/0:22,0:22:63.22:0,63,2323	0/0:46,0:46:99:0,111,3938	0/0:24,0:24:57.20:0,57,2178	0/0:33,0:33:84.29:0,84,3172	0/0:26,0:26:66.23:0,66,2439	0/0:29,0:29:81.28:0,81,3093	0/0:34,0:34:99:0,99,3757	0/0:17,0:17:48.16:0,48,1684	0/0:34,0:34:96.33:0,96,3535	0/0:33,0:33:90.78:0,91,3469	0/0:31,0:31:78.27:0,78,2954	0/0:25,0:25:72.25:0,72,2757	0/0:31,0:31:93.32:0,93,3389	0/0:20,0:20:54.17:0,54,1968	0/0:42,0:42:99:0,111,4148	0/0:32,0:32:84.29:0,84,3219	0/0:22,0:22:63.22:0,63,2412	0/0:26,0:26:69.24:0,69,2473	0/0:15,0:15:39.13:0,39,1520	1/1:6,24:29:72.25:1794,72,0	1/1:4,23:27:72.25:1796,72,0	1/1:1,3:4:9.03:225,9,0
chr10	6977270	.	CTCG	C	2735.28	PASS	AB=0.934;AC=11;AF=0.196;AN=56;BaseQRankSum=-3.422;DP=663;FS=1.299;HRun=0;HaplotypeScore=156.9650;InbreedingCoeff=0.2037;MQ=67.08;MQ0=0;MQRankSum=-4.863;QD=12.32;ReadPosRankSum=-5.429;VQSLOD=2.4268;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,111,2594	0/0:9,0:9:27.09:0,27,350	0/0:25,0:24:61.84:0,62,1221	0/0:29,0:28:62.68:0,63,1417	0/0:19,0:19:29.19:0,29,641	0/0:25,0:25:18.16:0,18,756	0/0:27,0:27:70.74:0,71,903	0/1:39,0:38:14.65:15,0,1024	0/1:20,0:20:14.73:15,0,621	0/0:30,0:30:84.14:0,84,1046	0/0:13,0:13:33.11:0,33,432	0/0:30,0:30:63.31:0,63,1121	0/1:26,0:26:47.44:47,0,714	0/1:16,0:16:6.56:7,0,434	0/0:25,0:25:69.12:0,69,887	0/0:22,0:22:9.15:0,9,673	0/1:36,0:36:19.33:19,0,994	0/0:23,0:23:19.02:0,19,655	0/0:22,0:21:53.57:0,54,657	0/0:9,0:9:2.18:0,2,291	0/0:39,0:39:12.34:0,12,1180	0/1:14,0:14:3.86:4,0,394	0/0:13,0:13:11.17:0,11,409	0/0:20,0:20:53.63:0,54,702	0/0:17,0:17:22.11:0,22,558	0/1:4,26:30:18.90:1263,0,19	1/1:0,25:25:69.24:1175,69,0	1/1:1,15:16:23.97:345,24,0
chr10	6977421	.	C	CT	11158.96	PASS	AB=0.636;AC=49;AF=0.875;AN=56;BaseQRankSum=-1.605;DP=491;FS=13.352;HRun=9;HaplotypeScore=78.1757;InbreedingCoeff=0.5855;MQ=60.79;MQ0=1;MQRankSum=-2.774;QD=25.65;ReadPosRankSum=0.097;VQSLOD=4.2595;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:92.96:0,93,803	1/1:2,9:11:4.01:256,4,0	0/0:10,0:9:0.03:0,0,108	0/0:12,0:9:1.97:0,2,45	1/1:5,23:29:66.03:686,66,0	1/1:2,20:22:54.15:597,54,0	1/1:2,8:10:18.05:199,18,0	1/1:6,33:40:95.28:1063,95,0	0/1:3,4:7:14.05:74,0,14	1/1:7,21:28:63.12:670,63,0	1/1:5,11:16:30.08:328,30,0	1/1:0,16:16:45.12:498,45,0	1/1:2,15:17:42.07:451,42,0	1/1:0,6:6:15.04:166,15,0	1/1:1,9:9:27.07:299,27,0	1/1:2,14:16:39.11:431,39,0	1/1:6,25:31:69.19:763,69,0	1/1:4,15:18:22.06:459,22,0	1/1:7,18:26:33.94:584,34,0	1/1:4,12:17:35.93:379,36,0	1/1:0,3:3:6.02:66,6,0	1/1:1,7:8:21.06:232,21,0	1/1:1,8:9:24.06:265,24,0	1/1:1,6:7:15.04:166,15,0	1/1:2,18:20:54.15:597,54,0	1/1:6,21:27:63.14:680,63,0	1/1:1,20:21:63.14:684,63,0	1/1:1,18:17:51.14:564,51,0
chr10	6977679	.	GACAGCTGTGTGGC	G	2714.67	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-4.426;DP=736;FS=2.715;HRun=0;HaplotypeScore=354.1793;InbreedingCoeff=0.9966;MQ=72.57;MQ0=0;MQRankSum=-7.985;QD=59.01;ReadPosRankSum=-0.013;VQSLOD=2.6925;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,38:46:75.26:2810,75,0	0/0:9,0:9:24.08:0,24,1368	0/0:17,0:16:42.14:0,42,2476	0/0:29,0:29:82.13:0,82,3894	0/0:17,0:17:42.62:0,43,2437	0/0:23,0:21:42.08:0,42,2314	0/0:33,0:33:90.31:0,90,5278	0/0:29,0:29:77.70:0,78,4327	0/0:27,0:27:72.25:0,72,4442	0/0:24,0:21:60.21:0,60,3551	0/0:11,0:11:33.09:0,33,1723	0/0:49,0:46:99:0,111,6512	0/0:33,0:31:78.27:0,78,4527	0/0:31,0:29:81.28:0,81,4866	0/0:43,0:42:99:0,114,7016	0/0:43,0:41:99:0,111,6473	0/0:27,0:27:81.25:0,81,4562	0/0:17,0:17:48.16:0,48,2740	0/0:21,0:21:50.60:0,51,2772	0/0:15,0:15:42.14:0,42,2265	0/0:47,0:47:99:0,135,7970	0/0:11,0:11:30.09:0,30,1725	0/0:11,0:11:30.10:0,30,1720	0/0:30,0:30:90.31:0,90,5447	0/0:19,0:19:54.19:0,54,3313	0/0:31,0:30:84.29:0,84,4469	0/0:28,0:27:72.22:0,72,3889	0/0:15,0:15:45.15:0,45,2682
chr10	6977934	.	C	CA	29299.51	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=6.137;DP=805;FS=9.258;HRun=0;HaplotypeScore=127.1383;InbreedingCoeff=0.9911;MQ=83.00;MQ0=0;MQRankSum=-7.615;QD=41.62;ReadPosRankSum=3.840;VQSLOD=3.4827;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,135,1887	1/1:1,6:7:15.05:240,15,0	0/0:29,0:29:81.26:0,81,1107	0/0:24,0:24:59.25:0,59,815	1/1:1,29:30:78.27:1247,78,0	1/1:1,32:33:96.33:1535,96,0	1/1:1,26:27:75.26:1199,75,0	1/1:3,45:48:99:2131,138,0	1/1:0,35:35:99:1631,102,0	1/1:4,40:44:99:1937,123,0	1/1:0,15:15:39.13:624,39,0	1/1:0,38:39:99:1769,111,0	1/1:0,31:31:84.29:1343,84,0	1/1:0,35:35:99:1582,99,0	1/1:0,47:47:99:2109,132,0	1/1:2,41:43:99:1823,114,0	1/1:1,32:33:90.31:1439,90,0	1/1:0,12:12:30.10:480,30,0	1/1:1,19:20:60.19:932,60,0	1/1:0,22:22:60.20:958,60,0	1/1:3,45:48:99:1965,123,0	1/1:0,14:14:39.13:623,39,0	1/1:0,13:13:33.11:528,33,0	1/1:2,23:25:63.21:1007,63,0	1/1:0,14:13:36.12:574,36,0	1/1:1,0:29:86.83:740,87,0	1/1:1,0:30:80.86:726,81,0	1/1:1,0:10:18:159,18,0
chr10	6978554	.	AAG	A	1410.46	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=-0.763;DP=556;FS=4.566;HRun=0;HaplotypeScore=142.3387;InbreedingCoeff=-0.0282;MQ=59.50;MQ0=13;MQRankSum=0.266;QD=4.64;ReadPosRankSum=-0.755;VQSLOD=2.4352;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:59.31:0,59,1054	0/1:6,0:6:0.35:19,0,0	0/0:46,0:15:22.55:0,23,536	0/0:48,0:15:41.73:0,42,552	0/0:17,0:17:4.86:0,5,27	0/1:25,0:24:7.50:7,0,21	0/1:13,0:12:17.99:18,0,19	0/1:19,0:18:10.67:11,0,90	0/1:22,0:22:18.30:18,0,65	0/1:27,0:29:99:121,0,239	0/0:18,0:18:10.11:0,10,71	0/0:20,0:21:6.71:0,7,92	0/0:16,0:16:1.80:0,2,94	0/1:17,0:17:8.64:12,0,9	0/1:13,0:14:10.39:10,0,46	0/0:16,0:16:26.95:0,27,168	0/1:21,0:21:16.14:45,0,16	0/0:16,0:16:1.85:0,2,134	0/1:13,0:13:3.52:4,0,62	1/1:13,0:13:2.21:25,2,0	0/0:12,0:14:2.12:0,2,5	0/1:25,0:25:65.27:65,0,97	0/1:12,0:12:33.64:34,0,45	0/1:14,0:14:18.12:29,0,18	0/0:12,0:12:7.52:0,8,107	1/1:19,11:30:71.62:657,72,0	1/1:13,10:23:37.08:352,37,0	1/1:5,2:7:12.04:147,12,0
chr10	6978564	.	GAGAGAGAA	G	2522.42	PASS	AB=0.974;AC=24;AF=0.429;AN=56;BaseQRankSum=-2.424;DP=583;FS=15.114;HRun=0;HaplotypeScore=186.6028;InbreedingCoeff=-0.4673;MQ=53.85;MQ0=17;MQRankSum=1.813;QD=6.20;ReadPosRankSum=0.551;VQSLOD=1.6606;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:44.12:0,44,396	1/1:4,0:4:11.99:100,12,0	0/0:45,0:12:13.05:0,13,162	0/0:52,0:12:0.12:0,0,90	0/1:21,0:21:8.99:9,0,145	0/1:24,0:23:99:127,0,316	0/1:15,0:14:6.94:7,0,255	0/1:23,0:22:99:114,0,285	0/1:20,0:20:99:147,0,229	0/1:27,0:27:47.47:47,0,781	0/1:19,0:19:40.37:40,0,366	0/1:26,0:26:79.45:79,0,375	0/0:17,0:17:9.57:0,10,476	0/1:15,0:15:71.97:72,0,205	0/1:16,0:16:28.04:28,0,243	0/1:21,0:21:25.55:26,0,470	0/0:23,0:23:15.70:0,16,291	0/1:16,0:16:9.37:9,0,595	0/1:16,0:16:4.79:5,0,548	0/1:12,0:12:37.42:37,0,77	0/1:15,0:14:34.43:34,0,83	0/1:19,0:18:72.58:73,0,139	0/1:14,0:14:54.37:54,0,154	0/1:18,0:18:73.90:74,0,156	0/0:9,0:9:15.04:0,15,371	0/1:22,11:32:99:761,0,199	0/1:15,9:24:99:528,0,187	1/1:6,2:9:24.01:312,24,0
chr10	6978572	.	AAGAGAGAGAG	A	2783	PASS	AB=0.888;AC=6;AF=0.107;AN=56;BaseQRankSum=-0.315;DP=609;FS=3.009;HRun=0;HaplotypeScore=203.1618;InbreedingCoeff=0.6109;MQ=52.29;MQ0=24;MQRankSum=-5.004;QD=35.23;ReadPosRankSum=1.194;VQSLOD=3.3909;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:35:8.48:0,8,188	0/1:5,0:5:0:0,0,0	0/0:43,0:10:4.37:0,4,58	0/0:54,0:12:2.03:0,2,5	0/0:22,0:22:24.04:0,24,469	0/0:27,0:26:30.09:0,30,754	0/0:16,0:15:15.05:0,15,445	0/0:22,0:21:34.25:0,34,692	0/0:18,0:17:18.06:0,18,509	0/0:25,0:25:51.17:0,51,1520	0/0:21,0:20:25.44:0,25,739	0/0:28,0:29:36.11:0,36,903	0/0:14,0:17:34.36:0,34,961	0/0:16,0:16:20.97:0,21,490	0/0:16,0:17:17.53:0,18,474	0/0:26,0:26:26.59:0,27,883	0/0:21,0:21:18.06:0,18,549	0/0:15,0:16:39.61:0,40,1197	0/0:15,0:14:33.11:0,33,1000	0/0:9,0:9:11.40:0,11,243	0/0:15,0:14:6.49:0,6,198	0/0:21,0:20:12.27:0,12,329	0/0:13,0:12:12.98:0,13,316	0/0:17,0:18:15.97:0,16,351	0/0:13,0:13:24.05:0,24,692	0/1:22,9:31:45.11:1228,0,45	1/1:28,1:29:48:1057,48,0	1/1:14,0:13:33.04:626,33,0
chr10	6978597	.	A	AGAGG	1928.39	PASS	AB=0.947;AC=23;AF=0.411;AN=56;BaseQRankSum=4.304;DP=620;FS=24.685;HRun=0;HaplotypeScore=172.6512;InbreedingCoeff=0.2127;MQ=58.44;MQ0=15;MQRankSum=-5.908;QD=5.57;ReadPosRankSum=0.227;VQSLOD=1.1329;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:29:69.15:69,0,88	0/0:4,0:4:8.99:0,9,75	0/0:32,0:15:29.55:0,30,253	0/0:41,0:14:11.54:0,12,157	0/0:30,0:30:41.68:0,42,348	1/1:7,1:21:9.03:169,9,0	0/1:3,15:22:4.14:96,0,4	0/0:32,0:31:60.26:0,60,556	1/1:2,1:15:9.02:152,9,0	0/1:25,0:25:70.87:71,0,337	0/0:25,0:24:35.94:0,36,323	0/1:24,0:24:96.60:97,0,188	0/1:18,0:18:95.79:119,0,96	0/1:16,0:16:74.47:74,0,125	0/1:23,0:23:33.65:34,0,209	1/1:5,22:29:8.68:206,9,0	1/1:23,1:25:11.01:304,11,0	0/1:14,0:14:48.40:48,0,186	1/1:21,0:20:12.85:310,13,0	1/1:8,0:8:20.34:159,20,0	0/0:21,0:20:20:0,20,189	0/0:22,0:22:4.80:0,5,225	0/1:20,0:19:5.40:5,0,291	0/1:19,0:19:1.89:2,0,205	0/1:13,2:15:2.71:196,0,3	0/0:26,0:25:46.64:0,47,605	0/0:23,0:23:64.46:0,64,595	0/0:18,0:17:41.51:0,42,328
chr10	6978621	.	GT	G	151.46	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.112;DP=603;FS=0.000;HRun=7;HaplotypeScore=116.9211;InbreedingCoeff=0.7942;MQ=68.24;MQ0=1;MQRankSum=0.567;QD=11.65;ReadPosRankSum=1.737;VQSLOD=2.2569;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:60.13:0,60,718	0/0:6,0:6:18.04:0,18,213	0/0:26,0:15:1.75:0,2,237	0/0:31,0:18:26.41:0,26,238	0/0:22,0:22:60.18:0,60,731	0/0:17,0:17:15.05:0,15,189	0/0:21,0:21:15.05:0,15,188	0/0:28,0:28:78.20:0,78,925	0/0:20,0:20:33.03:0,33,381	0/0:24,0:24:63.20:0,63,792	0/0:22,0:22:57.18:0,57,717	0/0:22,0:22:63.13:0,63,759	0/0:15,0:15:39.07:0,39,471	0/0:20,0:20:57.05:0,57,661	0/0:21,0:21:57.18:0,57,711	0/0:31,0:31:36.10:0,36,440	0/0:29,0:29:69.14:0,69,846	0/0:15,0:15:36.07:0,36,435	0/0:26,0:26:75.18:0,75,899	0/0:8,0:8:24.08:0,24,299	0/0:21,0:21:54.02:0,54,638	0/0:16,0:16:45.06:0,45,545	0/0:20,0:20:57.16:0,57,692	0/0:25,0:25:72.19:0,72,885	1/1:1,12:13:24.05:245,24,0	0/0:30,0:29:72.23:0,72,903	0/0:28,0:28:66.16:0,66,811	0/0:15,0:15:45.14:0,45,562
chr10	6978867	.	AT	A	3843.92	PASS	AB=0.833;AC=24;AF=0.429;AN=56;BaseQRankSum=2.919;DP=706;FS=3.815;HRun=12;HaplotypeScore=158.6072;InbreedingCoeff=0.8192;MQ=70.52;MQ0=1;MQRankSum=-2.925;QD=12.13;ReadPosRankSum=1.346;VQSLOD=1.9139;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:44,3:47:81.91:0,82,985	1/1:0,10:9:26.90:209,27,0	0/1:11,3:14:33.81:34,0,205	0/0:21,0:19:25.14:0,25,219	1/1:5,25:32:33.32:422,33,0	0/0:7,0:20:28.55:0,29,151	0/0:5,0:22:32.65:0,33,171	1/1:5,18:23:55.80:421,56,0	0/0:2,1:15:1.18:0,1,96	1/1:10,27:38:76.65:583,77,0	1/1:4,11:15:23.85:186,24,0	0/0:22,0:25:53.92:0,54,519	0/0:24,1:25:33.83:0,34,496	0/0:31,0:35:39.65:0,40,530	1/1:9,26:35:77.63:604,78,0	0/0:14,0:41:54.29:0,54,293	0/0:6,0:28:66.20:0,66,387	1/1:3,17:20:20.38:341,20,0	0/0:12,0:28:69.13:0,69,428	0/0:6,0:19:38.10:0,38,202	1/1:7,28:36:58.24:625,58,0	0/0:20,1:21:15.85:0,16,342	0/1:12,3:15:22.57:23,0,143	0/0:23,1:26:32.83:0,33,527	0/0:4,0:15:28.41:0,28,143	1/1:6,3:37:56.28:208,56,0	1/1:3,0:29:46.84:135,47,0	1/1:2,0:12:18.33:53,18,0
chr10	6979160	.	CT	C	9812.06	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-4.748;DP=637;FS=8.653;HRun=10;HaplotypeScore=94.5676;InbreedingCoeff=0.9220;MQ=68.20;MQ0=3;MQRankSum=-1.136;QD=18.20;ReadPosRankSum=4.069;VQSLOD=4.9894;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:84.18:0,84,898	1/1:5,6:10:23.98:208,24,0	0/0:28,0:17:29.42:0,29,209	0/0:29,1:16:9.73:0,10,159	1/1:5,24:29:68.96:598,69,0	1/1:2,20:22:47.30:415,47,0	1/1:3,16:19:5.81:279,6,0	1/1:14,30:43:80.79:703,81,0	1/1:3,12:15:35.98:313,36,0	1/1:4,26:29:80.98:703,81,0	1/1:2,25:27:68.95:596,69,0	1/1:3,14:16:44.99:390,45,0	1/1:9,9:18:43.75:363,44,0	1/1:4,5:9:23.99:207,24,0	1/1:5,14:19:41.98:365,42,0	1/1:2,16:18:38.98:339,39,0	1/1:2,31:33:83.98:729,84,0	1/1:7,16:23:50.97:443,51,0	1/1:8,26:32:60.38:633,60,0	1/1:2,23:25:38.71:496,39,0	1/1:4,2:6:14.98:126,15,0	1/1:3,16:19:47.98:417,48,0	1/1:2,15:17:38.90:335,39,0	1/1:5,7:12:14.97:130,15,0	1/1:2,28:31:77.01:657,77,0	1/1:5,2:29:53.51:192,54,0	1/1:9,0:25:42.10:139,42,0	1/1:1,0:7:12.22:36,12,0
chr10	6979173	.	TTTTTC	T	671.61	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-3.960;DP=666;FS=1.001;HRun=0;HaplotypeScore=179.6322;InbreedingCoeff=0.8971;MQ=62.68;MQ0=17;MQRankSum=2.295;QD=19.75;ReadPosRankSum=1.696;VQSLOD=3.5861;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,23:34:43.35:766,43,0	0/0:12,0:11:27.09:0,27,570	0/0:45,0:18:18.89:0,19,222	0/0:38,0:16:13.24:0,13,136	0/0:32,0:32:78.23:0,78,1749	0/0:23,0:23:48.09:0,48,969	0/0:20,0:20:48.13:0,48,1105	0/0:37,0:36:77.70:0,78,1459	0/0:15,0:15:36.11:0,36,840	0/0:33,0:32:54.16:0,54,1054	0/0:26,0:26:69.19:0,69,1323	0/0:22,0:21:51.12:0,51,980	0/0:18,0:18:33.11:0,33,725	0/0:12,0:12:30.09:0,30,561	0/0:20,0:20:48.14:0,48,901	0/0:21,0:21:54.18:0,54,1343	0/0:35,0:34:90.13:0,90,1902	0/0:21,0:20:54.09:0,54,1023	0/0:29,0:28:48.08:0,48,1021	0/0:26,0:26:66.21:0,66,1550	0/0:5,0:5:9.03:0,9,211	0/0:20,0:20:47.82:0,48,1011	0/0:19,0:19:45.10:0,45,860	0/0:10,0:10:14.96:0,15,345	0/0:31,0:31:81.21:0,81,1924	0/0:28,0:28:66.21:0,66,1351	0/0:24,0:23:66.21:0,66,1334	0/0:10,0:10:18.05:0,18,347
chr10	6979188	.	C	CT	6676.27	PASS	AB=0.636;AC=33;AF=0.589;AN=56;BaseQRankSum=-1.224;DP=649;FS=3.244;HRun=10;HaplotypeScore=110.6971;InbreedingCoeff=0.8314;MQ=56.23;MQ0=26;MQRankSum=-5.277;QD=18.97;ReadPosRankSum=-3.469;VQSLOD=3.4168;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:41.29:0,41,201	1/1:2,9:10:29.86:283,30,0	0/0:44,0:10:11.66:0,12,56	0/0:37,0:13:0.26:0,0,53	1/1:8,24:33:68.85:660,69,0	0/0:18,0:20:37.35:0,37,284	0/0:22,0:22:29.62:0,30,377	1/1:23,15:37:57.57:588,58,0	0/0:14,0:14:1.02:0,1,214	1/1:11,12:23:17.40:371,17,0	1/1:17,13:30:51.02:501,51,0	1/1:8,10:19:44.85:420,45,0	1/1:3,10:14:38.90:386,39,0	1/1:5,11:16:36:354,36,0	1/1:7,17:25:53.92:538,54,0	0/0:22,0:22:56.92:0,57,468	0/0:34,0:33:74.81:0,75,601	1/1:10,10:19:27.35:307,27,0	0/0:20,0:20:31.22:0,31,307	0/0:24,1:26:27.75:0,28,402	1/1:1,2:3:9.01:88,9,0	0/1:9,12:21:9.37:284,0,9	1/1:9,8:18:8.98:240,9,0	1/1:4,9:13:8.53:281,9,0	0/0:28,0:28:65.84:0,66,530	1/1:13,16:29:66.10:666,66,0	1/1:9,17:25:27.78:422,28,0	1/1:0,10:10:27.07:288,27,0
chr10	6981276	.	ATCTC	A	594.74	PASS	AB=0.784;AC=7;AF=0.146;AN=48;BaseQRankSum=-2.680;DP=740;FS=17.485;HRun=0;HaplotypeScore=178.0772;InbreedingCoeff=0.5026;MQ=55.35;MQ0=23;MQRankSum=1.790;QD=5.95;ReadPosRankSum=1.028;VQSLOD=1.8766;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:27:9:0,9,111	0/0:10,0:10:0:0,0,0	./.	./.	1/1:19,0:17:0.47:1,0,0	0/0:22,0:20:3.40:0,3,19	0/0:26,0:23:8.87:0,9,118	0/0:34,0:32:15.98:0,16,138	0/0:39,0:38:13.22:0,13,128	0/0:31,0:27:18.89:0,19,215	./.	0/0:31,0:30:11.31:0,11,144	0/0:33,0:31:19.56:0,20,175	0/0:38,0:36:9.45:0,9,73	0/0:40,0:39:9.35:0,9,67	0/0:57,0:50:8.90:0,9,176	0/0:17,0:15:6.33:0,6,40	0/0:8,0:8:11.72:0,12,122	0/0:34,0:28:17.98:0,18,224	0/0:26,0:22:0.47:0,0,1	0/0:22,0:21:4.35:0,4,16	./.	0/0:24,0:21:0:0,0,0	0/0:16,0:16:0:0,0,0	0/0:26,0:24:0.46:0,0,1	0/1:21,8:27:8.59:323,0,9	1/1:34,5:41:17.56:278,18,0	1/1:9,2:11:8.33:105,8,0
chr10	6981326	.	CAG	C	481.45	PASS	AB=0.959;AC=14;AF=0.259;AN=54;BaseQRankSum=-0.069;DP=816;FS=46.549;HRun=0;HaplotypeScore=242.5729;InbreedingCoeff=-0.1240;MQ=37.23;MQ0=75;MQRankSum=-1.257;QD=1.42;ReadPosRankSum=-4.118;VQSLOD=0.5531;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:2.28:0,2,47	0/0:7,0:7:11.32:0,11,133	0/0:116,0:11:12.51:0,13,418	0/0:143,0:19:22.88:0,23,602	1/1:20,1:19:2.21:25,2,0	0/0:18,1:18:8.73:0,9,372	0/1:25,1:18:25.79:26,0,169	0/0:30,0:21:42.88:0,43,981	0/1:29,1:29:29.01:29,0,249	0/1:17,1:17:68.67:69,0,426	0/0:9,0:8:2.95:0,3,61	0/1:38,4:39:99:139,0,323	0/1:34,1:31:17.07:17,0,599	0/1:25,1:23:28.62:80,0,29	0/1:44,0:43:27.02:27,0,251	0/1:43,3:40:99:156,0,299	0/1:8,0:8:45.97:46,0,129	0/0:11,0:10:1.46:0,1,257	0/0:24,0:17:13.22:0,13,706	0/0:10,2:11:1.31:0,1,36	./.	0/1:14,0:12:0.17:0,0,0	0/1:13,2:13:0.19:0,0,0	0/1:12,0:12:0.04:0,0,0	0/0:11,1:12:2.69:0,3,61	0/0:20,1:19:22.96:0,23,626	0/0:30,0:29:56.94:0,57,983	0/0:17,0:16:41.85:0,42,763
chr10	6981340	.	G	GTCTGTC	5687.37	PASS	AB=1.000;AC=37;AF=0.685;AN=54;BaseQRankSum=6.207;DP=833;FS=13.827;HRun=0;HaplotypeScore=293.9364;InbreedingCoeff=0.5696;MQ=42.23;MQ0=62;MQRankSum=-6.369;QD=11.56;ReadPosRankSum=2.014;VQSLOD=1.7505;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:20,0:20:0.11:0,0,0	1/1:8,0:8:14.03:211,14,0	0/0:111,0:14:32.92:0,33,490	0/0:134,0:34:33.84:0,34,717	0/1:17,0:15:0.25:0,0,1	1/1:19,0:18:35.55:619,36,0	1/1:28,0:23:0.85:116,1,0	1/1:34,0:26:28.89:457,29,0	1/1:28,1:29:19.44:379,19,0	0/1:21,0:19:15.02:606,0,15	0/1:10,0:8:0.29:1,0,0	1/1:41,1:38:14.72:592,15,0	1/1:35,1:32:41.29:735,41,0	1/1:26,2:25:5.77:69,6,0	1/1:46,0:44:20.63:298,21,0	1/1:48,1:43:22.80:404,23,0	1/1:7,0:7:14.72:254,15,0	0/1:8,0:8:6.77:442,0,7	1/1:17,0:12:20.96:389,21,0	1/1:16,0:16:6.37:71,6,0	./.	1/1:16,0:14:3.15:20,3,0	0/1:11,0:10:0.18:0,0,0	0/1:11,0:11:0.20:0,0,0	1/1:18,0:18:2.21:24,2,0	0/0:23,0:21:58.04:0,58,794	0/0:36,0:35:58.81:0,59,808	0/0:20,0:19:47.92:0,48,622
chr10	6981344	.	G	GTCTCTGTC	9123.48	PASS	AB=0.889;AC=41;AF=0.732;AN=56;BaseQRankSum=5.459;DP=845;FS=20.764;HRun=0;HaplotypeScore=312.4801;InbreedingCoeff=0.5461;MQ=42.44;MQ0=55;MQRankSum=-6.525;QD=17.02;ReadPosRankSum=0.478;VQSLOD=2.2960;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:20,4:24:9.93:10,0,78	1/1:7,1:8:15:394,15,0	0/0:104,0:14:35.93:0,36,618	0/0:128,0:36:38.71:0,39,1042	0/0:15,2:15:1.41:0,1,2	1/1:18,3:20:35.88:977,36,0	1/1:28,3:24:15.97:206,16,0	1/1:31,0:21:41.95:625,42,0	1/1:28,3:30:19.76:596,20,0	1/1:20,3:20:2.94:957,3,0	1/1:10,0:8:0.17:0,0,0	1/1:41,1:39:27.94:1026,28,0	1/1:34,2:32:50.56:1149,51,0	1/1:29,3:29:6.71:125,7,0	1/1:46,1:44:19.85:489,20,0	1/1:45,3:42:37.81:722,38,0	1/1:10,0:10:17.84:417,18,0	1/1:5,3:8:2.04:652,2,0	1/1:18,1:13:24.12:551,24,0	1/1:14,1:15:7.38:111,7,0	0/1:13,2:11:0:0,0,0	1/1:13,4:15:2.09:14,2,0	0/1:11,0:10:0.47:0,0,0	0/1:7,5:12:0.11:0,0,0	1/1:21,0:21:8.34:72,8,0	0/0:25,0:23:23.02:0,23,890	0/0:35,0:34:9.29:0,9,911	0/1:23,0:22:28.36:28,0,686
chr10	6981348	.	C	CTG	2063.55	PASS	AB=0.871;AC=29;AF=0.537;AN=54;BaseQRankSum=6.104;DP=829;FS=0.482;HRun=0;HaplotypeScore=304.0908;InbreedingCoeff=-0.0101;MQ=42.94;MQ0=49;MQRankSum=-4.067;QD=3.89;ReadPosRankSum=6.282;VQSLOD=1.8447;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:2.81:0,3,23	0/1:6,2:8:4.34:72,0,4	0/0:92,0:15:38.96:0,39,486	0/0:121,0:39:41.18:0,41,766	1/1:11,6:15:1.77:6,2,0	1/1:16,6:20:14.29:257,14,0	1/1:31,2:26:1.49:69,1,0	0/1:30,0:20:17.10:197,0,17	0/1:24,7:30:11.14:138,0,11	0/1:20,2:19:99:200,0,104	0/1:8,2:8:0:0,0,0	0/1:34,10:40:13.66:223,0,14	1/1:27,10:33:11.61:311,12,0	0/1:23,9:29:10.99:11,0,17	1/1:29,20:46:16.35:147,16,0	0/1:38,11:43:49.96:142,0,50	0/1:8,2:10:12.64:81,0,13	1/1:5,3:8:10.65:187,11,0	0/1:13,1:10:8.81:124,0,9	0/1:12,3:15:8.65:19,0,9	./.	0/0:17,0:15:2.65:0,3,11	0/1:8,2:9:0.19:0,0,0	0/1:10,2:12:0.14:0,0,0	1/1:18,2:20:1.29:21,1,0	0/0:28,0:26:56.10:0,56,422	0/1:34,0:33:4.29:4,0,250	0/1:23,0:22:1.32:1,0,117
chr10	6981353	.	T	TCA	4376.25	PASS	AB=0.989;AC=45;AF=0.804;AN=56;BaseQRankSum=-3.033;DP=829;FS=2.058;HRun=0;HaplotypeScore=322.1303;InbreedingCoeff=0.2969;MQ=42.43;MQ0=42;MQRankSum=0.372;QD=6.92;ReadPosRankSum=-3.057;VQSLOD=3.6021;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:29:5.33:46,5,0	1/1:8,0:8:0.94:52,1,0	0/0:84,0:16:21.04:0,21,226	0/0:107,0:38:20.73:0,21,357	1/1:17,0:15:1.77:6,2,0	1/1:23,0:21:2.15:58,2,0	1/1:36,0:27:8.83:78,9,0	1/1:29,0:19:21.90:185,22,0	0/1:34,0:32:8.81:79,0,9	1/1:22,0:20:45.97:347,46,0	0/1:12,0:10:0:0,0,0	1/1:44,0:41:16.40:243,16,0	0/1:39,0:35:22.32:135,0,22	1/1:32,0:30:13.71:131,14,0	0/1:49,0:47:11.44:26,0,11	1/1:46,0:43:23.31:304,23,0	0/1:11,0:12:0.56:81,0,1	1/1:8,0:8:15.99:102,16,0	1/1:16,0:14:20.85:168,21,0	1/1:13,0:13:4.19:40,4,0	1/1:16,0:13:2.98:22,3,0	1/1:15,0:14:3:25,3,0	0/1:12,0:11:0.01:0,0,0	0/1:14,0:13:0.14:0,0,0	1/1:25,0:24:5.99:47,6,0	1/1:17,9:24:27.65:721,28,0	1/1:12,20:31:44.76:679,45,0	1/1:9,14:22:54.15:802,54,0
chr10	6981369	.	ACTCT	A	2150.49	PASS	AB=0.810;AC=13;AF=0.232;AN=56;BaseQRankSum=8.327;DP=858;FS=1.028;HRun=0;HaplotypeScore=343.8238;InbreedingCoeff=-0.3210;MQ=40.25;MQ0=41;MQRankSum=-5.301;QD=5.72;ReadPosRankSum=3.936;VQSLOD=1.6373;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,2:37:29.25:0,29,505	0/1:4,2:8:95.23:132,0,95	0/0:70,2:11:32.46:0,32,672	0/0:90,1:35:32.56:0,33,1000	0/0:11,6:19:11.40:0,11,79	0/1:11,6:20:99:277,0,228	0/0:31,2:29:16.84:0,17,250	0/0:29,0:24:4.88:0,5,768	0/1:14,8:30:99:218,0,355	0/1:14,2:23:99:146,0,720	0/0:9,2:11:5.91:0,6,100	0/1:22,12:39:99:364,0,518	0/1:19,9:35:99:317,0,467	0/1:14,9:34:13.32:13,0,512	0/1:27,20:55:99:247,0,254	0/1:26,10:49:99:176,0,1143	0/1:11,2:17:99:145,0,295	0/1:2,3:8:88:181,0,88	0/1:15,1:13:44.80:45,0,501	0/1:12,3:14:40.10:40,0,174	0/0:21,1:23:20.25:0,20,280	0/0:11,0:15:16.11:0,16,206	0/0:10,3:12:11.06:0,11,133	0/0:17,2:22:23.59:0,24,444	0/0:16,2:24:27.33:0,27,400	0/0:22,0:22:62.57:0,63,1163	0/0:25,0:25:51.16:0,51,965	0/0:24,0:22:54.66:0,55,1043
chr10	6981402	.	T	TTC	17958.76	PASS	AB=0.681;AC=44;AF=0.786;AN=56;BaseQRankSum=-1.659;DP=1002;FS=0.620;HRun=0;HaplotypeScore=309.1947;InbreedingCoeff=0.1814;MQ=38.79;MQ0=80;MQRankSum=3.919;QD=20.22;ReadPosRankSum=1.738;VQSLOD=4.2933;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,35:49:65.22:1070,65,0	1/1:7,5:9:8.96:148,9,0	0/0:54,0:10:14.84:0,15,135	0/0:57,0:9:8.38:0,8,82	0/1:9,16:20:1.26:234,0,1	1/1:14,9:20:14.76:337,15,0	0/1:39,12:42:99:580,0,105	0/1:35,25:41:99:700,0,222	1/1:17,17:31:48.04:741,48,0	1/1:17,17:32:46.32:1160,46,0	1/1:11,13:17:25.95:434,26,0	1/1:32,25:50:59.96:911,60,0	0/1:25,19:37:2.28:763,0,2	1/1:15,20:33:44.92:693,45,0	1/1:29,30:59:56.78:901,57,0	1/1:30,42:68:99:1850,121,0	1/1:5,18:23:31.14:652,31,0	1/1:5,2:7:5.89:100,6,0	1/1:14,11:14:30.10:498,30,0	0/1:18,10:22:53.42:352,0,53	0/1:16,22:35:49.85:761,0,50	1/1:10,12:22:42.07:628,42,0	0/1:8,13:18:4.65:452,0,5	1/1:6,20:27:35.94:556,36,0	0/1:13,16:26:3.59:595,0,4	1/1:16,14:31:87.24:1321,87,0	1/1:24,8:32:67.03:936,67,0	1/1:12,9:20:44.93:584,45,0
chr10	6981471	.	T	TCA	13300.17	PASS	AB=0.934;AC=44;AF=0.786;AN=56;BaseQRankSum=-2.406;DP=1070;FS=3.771;HRun=0;HaplotypeScore=236.6752;InbreedingCoeff=0.7552;MQ=40.06;MQ0=123;MQRankSum=0.943;QD=14.99;ReadPosRankSum=2.164;VQSLOD=4.7499;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:25,23:47:67.02:1191,67,0	1/1:6,12:14:21.35:337,21,0	0/0:31,0:6:13.41:0,13,110	0/0:45,0:16:9.07:0,9,176	1/1:20,16:22:24.98:358,25,0	1/1:10,19:24:27.09:450,27,0	0/1:45,8:29:27.41:268,0,27	0/1:47,0:10:11.03:11,0,57	1/1:9,25:29:41.69:610,42,0	1/1:9,37:40:99:1477,102,0	1/1:15,5:15:23.58:321,24,0	1/1:15,39:43:45.05:660,45,0	1/1:24,12:25:41.79:459,42,0	1/1:11,26:30:7.40:606,7,0	1/1:25,21:39:38.49:541,38,0	1/1:45,27:58:13.23:876,13,0	1/1:14,11:21:50.97:682,51,0	1/1:2,9:9:18.06:301,18,0	1/1:28,5:11:21.06:310,21,0	1/1:27,12:26:51.13:761,51,0	1/1:26,55:71:80.86:1292,81,0	1/1:12,31:39:25.60:572,26,0	1/1:14,13:16:29.93:382,30,0	1/1:17,14:26:35.64:557,36,0	1/1:14,5:15:23.81:278,24,0	0/0:56,0:44:99:0,102,1175	0/0:36,0:35:98.39:0,98,1137	0/0:13,0:12:24.08:0,24,304
chr10	6981507	.	T	TCA	2143.02	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=-4.267;DP=1041;FS=3.739;HRun=0;HaplotypeScore=289.0187;InbreedingCoeff=0.8062;MQ=41.15;MQ0=50;MQRankSum=-1.940;QD=13.07;ReadPosRankSum=2.967;VQSLOD=3.2952;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:44:81.35:0,81,1099	0/0:14,0:11:17.87:0,18,155	0/0:50,0:21:13.33:0,13,229	0/0:50,0:21:10.52:0,11,170	0/0:26,0:16:32.85:0,33,314	0/0:25,0:22:23.46:0,23,214	0/0:38,0:31:74.62:0,75,787	0/0:53,0:37:72.01:0,72,728	0/0:41,0:34:38.67:0,39,350	0/0:45,0:38:81.07:0,81,901	0/0:20,0:18:38.55:0,39,347	0/0:51,0:39:49.91:0,50,480	0/0:32,0:24:56.80:0,57,562	0/0:33,0:27:14.50:0,14,129	0/0:60,0:52:75.76:0,76,745	0/0:67,0:51:95.49:0,95,1002	0/0:26,0:21:54.14:0,54,640	0/0:16,0:11:17.96:0,18,175	0/0:20,0:10:14.97:0,15,139	0/0:31,0:24:51.06:0,51,572	0/1:79,0:77:18.75:19,0,1262	0/0:41,0:34:32.35:0,32,277	0/0:29,0:19:38.75:0,39,340	0/0:38,0:30:53.73:0,54,612	0/0:24,0:19:44.73:0,45,426	1/1:25,18:39:84.08:1149,84,0	1/1:17,13:29:53.54:769,54,0	1/1:5,4:9:27.02:355,27,0
chr10	6981545	.	TCA	T	1359.80	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=-2.116;DP=980;FS=0.585;HRun=0;HaplotypeScore=267.0304;InbreedingCoeff=0.9004;MQ=38.74;MQ0=71;MQRankSum=-1.704;QD=14.62;ReadPosRankSum=-0.695;VQSLOD=3.1682;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:48:99:0,105,1669	0/0:17,0:15:30.49:0,30,426	0/0:45,0:14:20.70:0,21,321	0/0:43,0:12:18.06:0,18,289	0/0:27,0:17:29.98:0,30,507	0/1:24,0:20:0.02:0,0,0	0/0:34,0:32:69.18:0,69,1145	0/0:45,0:38:93.25:0,93,1494	0/0:33,0:29:44.78:0,45,766	0/0:36,0:29:81.18:0,81,1252	0/0:22,0:16:29.67:0,30,456	0/0:48,0:38:35.63:0,36,609	0/0:33,0:28:36.43:0,36,509	0/0:32,0:26:29.85:0,30,511	0/0:54,0:47:41.51:0,42,653	0/0:74,0:62:99:0,99,1610	0/0:21,0:19:39.13:0,39,666	0/0:12,0:8:4.71:0,5,218	0/0:18,0:15:33.08:0,33,510	0/0:35,0:23:42.04:0,42,645	0/0:74,0:71:99:0,114,1921	0/0:42,0:32:35.44:0,35,579	0/0:24,0:20:48.16:0,48,821	0/0:32,0:30:62.89:0,63,1017	0/0:36,0:27:55.77:0,56,930	1/1:11,27:34:23.87:875,24,0	1/1:11,7:17:32.54:351,33,0	1/1:2,11:12:23.97:274,24,0
chr10	6981599	.	T	TCTCACA	137.48	PASS	AB=0.923;AC=5;AF=0.089;AN=56;BaseQRankSum=4.276;DP=802;FS=6.490;HRun=0;HaplotypeScore=220.7458;InbreedingCoeff=0.1912;MQ=44.66;MQ0=135;MQRankSum=2.143;QD=1.86;ReadPosRankSum=-4.723;VQSLOD=1.0141;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:41:83.41:0,83,1736	0/0:17,0:15:17.72:0,18,393	0/0:64,0:19:28.87:0,29,370	0/0:87,0:32:36.96:0,37,961	0/0:16,1:9:5.47:0,5,84	0/0:16,0:12:6.02:0,6,122	1/1:13,0:11:0.47:1,0,0	0/0:21,0:9:17.44:0,17,161	0/0:21,0:14:8.08:0,8,67	0/1:33,2:24:99:211,0,853	1/1:23,2:13:1.34:3,1,0	0/0:35,0:24:14:0,14,217	0/0:22,1:14:25.47:0,25,351	0/0:27,0:18:11.84:0,12,198	0/0:36,0:29:6.45:0,6,259	0/0:62,0:47:45.50:0,45,779	0/0:7,0:5:9.02:0,9,115	0/0:6,0:4:2.97:0,3,20	0/0:14,0:5:15.05:0,15,255	0/0:33,2:20:1.47:0,1,106	0/0:34,0:29:1.41:0,1,201	0/0:28,0:15:10.07:0,10,199	0/0:10,1:6:5.51:0,6,67	0/0:20,1:18:9.43:0,9,162	0/0:23,0:17:11.43:0,11,295	0/0:40,0:36:99:0,99,2084	0/0:18,0:18:48.14:0,48,994	0/0:20,0:18:45.15:0,45,1052
chr10	6981647	.	ACT	A	301.99	PASS	AB=0.947;AC=14;AF=0.292;AN=48;BaseQRankSum=5.313;DP=638;FS=0.902;HRun=0;HaplotypeScore=134.0013;InbreedingCoeff=0.1200;MQ=32.80;MQ0=111;MQRankSum=-2.719;QD=1.19;ReadPosRankSum=-0.899;VQSLOD=2.5264;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:25,1:22:29.07:29,0,46	0/0:8,0:5:2.01:0,2,10	0/0:36,0:4:10.15:0,10,93	0/0:46,0:9:18.06:0,18,294	./.	1/1:15,0:12:3.01:41,3,0	0/1:16,0:10:12.03:12,0,12	0/1:51,0:24:61.51:62,0,219	0/0:24,2:22:16.17:0,16,77	0/0:18,0:8:12.12:0,12,69	0/0:18,0:7:2.97:0,3,21	0/1:42,0:30:18.45:18,0,23	0/1:21,4:16:28.64:29,0,121	0/0:22,0:16:5.77:0,6,54	0/0:38,0:30:1.88:0,2,30	0/0:52,0:35:6.14:0,6,101	0/0:6,1:2:3.01:0,3,37	./.	0/1:10,2:3:10.91:35,0,11	1/1:13,0:6:5.38:31,5,0	1/1:30,1:21:12.21:180,12,0	./.	./.	1/1:19,1:14:0.66:5,1,0	0/0:6,0:5:3:0,3,26	0/0:35,0:32:87.14:0,87,1293	0/0:27,0:25:69.18:0,69,1097	0/0:16,0:13:39.08:0,39,627
chr10	6981653	.	TCA	T	1094.86	PASS	AB=0.952;AC=23;AF=0.479;AN=48;BaseQRankSum=7.469;DP=666;FS=48.438;HRun=0;HaplotypeScore=137.1118;InbreedingCoeff=0.2678;MQ=32.19;MQ0=108;MQRankSum=-5.119;QD=2.52;ReadPosRankSum=-2.484;VQSLOD=0.5166;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:21,4:21:45.67:84,0,46	1/1:7,0:4:8.31:48,8,0	0/0:42,0:6:10.55:0,11,135	0/0:49,0:13:29.99:0,30,392	./.	0/1:13,1:10:9.92:10,0,18	0/1:21,0:11:0.01:0,0,0	1/1:49,6:22:42.44:373,42,0	1/1:27,1:22:19.73:91,20,0	0/1:16,1:9:18.76:19,0,31	0/1:15,0:6:0.01:0,0,0	1/1:41,2:30:25.55:140,26,0	0/1:24,2:19:39.83:88,0,40	1/1:27,0:20:9.83:55,10,0	1/1:40,0:31:19.01:148,19,0	0/1:51,2:36:34.49:135,0,34	0/0:7,1:3:5.93:0,6,57	./.	0/1:11,0:3:6.02:13,0,6	0/0:11,1:6:1.53:0,2,5	0/1:29,2:23:7.45:43,0,7	./.	./.	1/1:19,3:16:0.56:5,1,0	0/0:6,0:5:3.01:0,3,48	0/0:40,0:33:87.22:0,87,1343	0/0:26,0:24:60.21:0,60,1025	0/0:16,0:13:36.12:0,36,600
chr10	6981727	.	A	ACT	1207.86	PASS	AB=0.931;AC=30;AF=0.625;AN=48;BaseQRankSum=-1.107;DP=438;FS=10.975;HRun=0;HaplotypeScore=93.8054;InbreedingCoeff=-0.0734;MQ=28.97;MQ0=114;MQRankSum=-0.932;QD=3.34;ReadPosRankSum=-2.384;VQSLOD=0.2314;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:10,0:8:10.31:39,0,10	1/1:5,1:2:2.37:8,2,0	./.	0/1:27,0:4:1.34:1,0,17	0/0:17,4:14:5.76:0,6,70	0/1:13,0:10:7.51:8,0,50	0/1:18,0:7:0:0,0,0	1/1:18,10:9:23.90:186,24,0	0/1:12,6:13:2.21:130,0,2	0/1:27,1:16:34.12:116,0,34	1/1:10,0:4:6.01:76,6,0	1/1:15,7:13:12.95:167,13,0	0/1:11,2:9:11.07:11,0,29	1/1:9,7:9:5.69:62,6,0	1/1:16,2:13:11.98:146,12,0	0/1:23,5:16:21.36:152,0,21	./.	./.	1/1:9,0:2:2.99:24,3,0	1/1:6,0:3:1.25:3,1,0	0/1:22,1:14:7.02:7,0,58	0/1:10,4:10:58.30:90,0,58	./.	1/1:11,3:11:5.72:70,6,0	0/0:5,5:6:3.01:0,3,39	0/1:27,0:19:19.16:19,0,135	0/1:12,0:9:29.14:32,0,29	0/0:4,0:4:5.75:0,6,49
chr10	6981756	.	T	TCTC	233.57	PASS	AB=0.777;AC=14;AF=0.538;AN=26;BaseQRankSum=-1.986;DP=99;FS=14.472;HRun=0;HaplotypeScore=37.4983;InbreedingCoeff=0.2977;MQ=66.01;MQ0=11;MQRankSum=-0.380;QD=4.10;ReadPosRankSum=-0.042;VQSLOD=0.0533;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:3,2:3:0.89:0,1,2	0/1:4,0:3:16.10:19,0,16	0/0:6,0:3:5.47:0,5,59	0/0:7,0:6:4.27:0,4,117	0/1:3,9:2:0:0,0,0	./.	./.	./.	1/1:0,3:2:3.01:43,3,0	1/1:6,7:10:11.95:148,12,0	./.	./.	./.	./.	1/1:1,1:1:3.01:44,3,0	./.	./.	1/1:2,0:1:2.97:20,3,0	./.	0/0:1,3:2:0:0,0,0	0/1:2,0:2:0:0,0,0	0/1:1,6:4:0.14:0,0,0	1/1:4,7:5:4.83:48,5,0	./.	./.	./.	./.	./.
chr10	6981882	.	T	TTC	47.14	PASS	AB=0.951;AC=12;AF=0.300;AN=40;BaseQRankSum=3.603;DP=510;FS=0.000;HRun=0;HaplotypeScore=45.2057;InbreedingCoeff=0.2584;MQ=15.58;MQ0=292;MQRankSum=0.464;QD=0.31;ReadPosRankSum=-1.393;VQSLOD=0.9942;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:12,0:6:11.29:11,0,50	0/0:8,0:3:0:0,0,0	./.	./.	0/0:19,0:6:0:0,0,0	0/0:9,0:5:6.13:0,6,34	0/0:25,0:12:29.77:0,30,239	0/0:25,0:1:3.01:0,3,39	./.	0/0:31,0:8:21.03:0,21,255	./.	1/1:11,0:3:3.01:32,3,0	0/1:13,0:7:30.88:32,0,31	./.	./.	1/1:19,0:2:2.96:19,3,0	0/0:13,0:6:9.91:0,10,118	0/0:9,0:2:3.01:0,3,38	./.	1/1:23,2:14:2.72:13,3,0	1/1:24,1:4:3:48,3,0	./.	0/1:22,2:16:0:0,0,0	0/1:19,1:7:0:0,0,0	0/0:28,0:18:3.20:0,3,54	0/0:9,0:2:3.01:0,3,39	0/0:4,0:1:3.01:0,3,33	0/0:3,0:2:3.01:0,3,37
chr10	6981898	.	T	TAC	175.27	PASS	AB=0.920;AC=14;AF=0.333;AN=42;BaseQRankSum=3.851;DP=589;FS=0.000;HRun=0;HaplotypeScore=53.3772;InbreedingCoeff=0.3067;MQ=15.44;MQ0=354;MQRankSum=0.042;QD=0.89;ReadPosRankSum=-1.666;VQSLOD=1.1232;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:18,1:7:40.16:41,0,40	./.	./.	./.	0/0:24,0:10:0:0,0,0	0/0:9,0:6:5.63:0,6,39	0/0:27,0:12:20.99:0,21,264	0/0:34,0:2:6.02:0,6,98	0/1:15,1:2:0:0,0,0	0/0:39,0:10:20.91:0,21,225	0/1:20,0:9:0:0,0,0	1/1:11,1:3:6.02:89,6,0	0/1:15,1:7:18.94:80,0,19	./.	0/1:16,3:4:0:0,0,0	1/1:19,4:4:3.01:36,3,0	0/0:17,0:6:9.89:0,10,83	0/0:12,0:2:5.95:0,6,44	1/1:10,0:1:2.60:10,3,0	0/0:25,0:12:0.47:0,0,1	1/1:34,0:5:2.80:30,3,0	./.	./.	0/1:22,0:8:0.02:0,0,0	0/0:31,0:20:3.16:0,3,71	0/0:11,0:2:3:0,3,26	./.	0/0:5,0:1:2.98:0,3,21
chr10	6981923	.	ACACACACT	A	367.68	PASS	AB=0.982;AC=13;AF=0.260;AN=50;BaseQRankSum=3.904;DP=748;FS=14.045;HRun=0;HaplotypeScore=91.7462;InbreedingCoeff=0.0855;MQ=16.20;MQ0=448;MQRankSum=0.289;QD=1.45;ReadPosRankSum=2.064;VQSLOD=0.9396;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:9:36.76:37,0,68	0/1:6,0:4:0:0,0,0	./.	./.	1/1:21,0:10:0.47:1,0,0	1/1:19,0:6:3.01:34,3,0	0/0:31,0:11:4.13:0,4,255	0/0:37,0:2:3.01:0,3,73	0/1:26,1:8:0:0,0,0	0/0:56,0:18:42.14:0,42,1622	0/0:20,0:9:3.01:0,3,129	0/1:34,1:11:77.40:153,0,77	0/1:31,1:9:99:144,0,185	0/1:30,1:8:0:2,0,0	0/0:41,3:15:1.70:0,2,52	1/1:32,4:9:2.79:83,3,0	0/1:23,0:7:26.80:27,0,199	0/0:15,0:2:6.02:0,6,221	0/0:13,0:1:2.96:0,3,19	0/0:23,0:12:0:0,0,0	./.	0/0:32,0:17:2.70:0,3,129	0/0:30,0:19:9.03:0,9,388	0/0:24,0:10:5.58:0,6,249	0/0:36,0:25:0.58:0,1,25	0/0:11,0:1:3.01:0,3,59	0/0:9,0:7:21.07:0,21,585	0/0:7,0:2:6.02:0,6,178
chr10	6981945	.	TCACA	T	189.71	PASS	AB=0.926;AC=9;AF=0.196;AN=46;BaseQRankSum=2.398;DP=840;FS=1.560;HRun=0;HaplotypeScore=99.5880;InbreedingCoeff=0.2023;MQ=16.00;MQ0=531;MQRankSum=1.059;QD=1.19;ReadPosRankSum=1.546;VQSLOD=1.7694;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:4:3.90:0,4,57	./.	./.	./.	0/1:21,0:12:0:0,0,0	0/0:25,0:7:2.85:0,3,36	0/0:21,0:7:3.48:0,3,75	0/0:45,0:1:3.01:0,3,72	0/1:34,0:13:0.34:0,0,0	0/0:47,0:18:48.16:0,48,1252	0/0:17,1:7:3.01:0,3,71	0/0:47,0:17:11.10:0,11,171	0/0:42,0:11:11.93:0,12,219	0/1:38,0:11:0.21:1,0,0	0/0:63,0:26:1.99:0,2,78	0/0:59,0:21:1.86:0,2,46	0/0:27,0:6:6.02:0,6,148	./.	0/0:16,0:2:6.02:0,6,116	0/0:20,1:11:0:0,0,0	./.	0/0:30,1:15:2.85:0,3,70	0/0:29,0:15:9.03:0,9,203	0/0:29,0:8:2.66:0,3,70	0/1:35,0:22:0.66:1,0,45	1/1:10,1:1:3.01:51,3,0	0/1:5,7:7:99:180,0,195	1/1:7,2:1:3.01:51,3,0
chr10	6981956	.	TTC	T	122.01	PASS	AB=1.000;AC=8;AF=0.211;AN=38;BaseQRankSum=2.112;DP=859;FS=2.002;HRun=0;HaplotypeScore=93.8565;InbreedingCoeff=0.3027;MQ=15.87;MQ0=551;MQRankSum=-0.602;QD=1.42;ReadPosRankSum=1.455;VQSLOD=1.8900;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:4:2.60:0,3,10	0/0:9,0:4:2.86:0,3,36	./.	./.	./.	0/0:27,0:8:2.85:0,3,37	./.	0/0:51,0:1:3.01:0,3,50	0/0:38,0:17:12.01:0,12,162	0/0:47,0:22:49.41:0,49,800	0/0:13,0:4:0:0,0,0	0/0:46,0:18:11.92:0,12,156	0/0:47,0:12:11.97:0,12,157	0/0:40,0:13:5.97:0,6,74	0/0:62,0:27:8.83:0,9,86	0/0:64,0:24:14.87:0,15,182	0/1:28,0:4:9.93:10,0,73	./.	0/1:25,0:2:14.58:15,0,45	0/0:20,0:9:0:0,0,0	./.	./.	./.	./.	0/0:32,0:19:0.44:0,0,47	1/1:9,1:1:3.01:36,3,0	1/1:5,9:7:12.03:138,12,0	1/1:7,2:1:3.01:35,3,0
chr10	6982017	.	T	TCTCTCACA	79.92	PASS	AB=0.984;AC=15;AF=0.417;AN=36;BaseQRankSum=4.347;DP=920;FS=0.000;HRun=0;HaplotypeScore=89.2437;InbreedingCoeff=0.1509;MQ=15.65;MQ0=607;MQRankSum=-0.526;QD=0.19;ReadPosRankSum=-2.686;VQSLOD=0.5483;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	1/1:7,2:2:1.26:38,1,0	./.	./.	./.	0/1:29,0:18:0:1,0,0	0/0:40,0:8:2.72:0,3,87	0/0:56,0:2:6.02:0,6,148	0/0:38,0:15:3.01:0,3,88	0/1:39,2:17:93.84:94,0,779	./.	0/1:46,0:22:9.86:10,0,163	0/0:50,0:16:19.26:0,19,498	1/1:43,0:16:0.46:1,0,0	0/1:73,0:35:0.01:0,0,0	0/1:75,0:28:6.98:7,0,402	./.	0/0:15,0:4:2.97:0,3,20	0/0:25,0:2:6.02:0,6,131	./.	0/1:56,0:7:0:0,0,0	0/1:25,2:7:0:0,0,0	./.	./.	1/1:19,3:8:1.74:7,2,0	0/0:8,0:1:3.01:0,3,88	1/1:9,0:1:2.96:19,3,0	./.
chr10	6982050	.	T	TTCTC	422.32	PASS	AB=0.957;AC=13;AF=0.382;AN=34;BaseQRankSum=2.349;DP=865;FS=2.674;HRun=0;HaplotypeScore=80.9335;InbreedingCoeff=0.2779;MQ=18.06;MQ0=458;MQRankSum=0.936;QD=0.87;ReadPosRankSum=-1.642;VQSLOD=0.8719;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	./.	0/0:26,2:17:1.79:0,2,52	0/1:40,0:10:0:1,0,0	0/0:31,0:2:6:0,6,77	0/1:40,0:21:0:0,0,0	0/0:47,0:15:36.10:0,36,609	./.	0/1:43,3:24:81.53:82,0,95	1/1:56,3:31:11.21:247,11,0	0/1:51,1:20:0.31:0,0,0	0/1:48,4:23:0.03:1,0,0	0/1:65,3:28:91.78:111,0,92	0/0:33,0:16:5.99:0,6,75	0/0:17,0:7:9.03:0,9,125	0/0:17,0:2:6.02:0,6,107	./.	0/1:70,0:19:0:0,0,0	0/1:28,1:9:0:0,0,0	./.	./.	0/1:15,1:5:0:0,0,0	1/1:11,1:1:3.01:77,3,0	./.	./.
chr10	6982056	.	CTCACACACAT	C	414.24	PASS	AB=0.991;AC=8;AF=0.190;AN=42;BaseQRankSum=1.714;DP=891;FS=7.056;HRun=0;HaplotypeScore=102.3446;InbreedingCoeff=0.1996;MQ=19.59;MQ0=433;MQRankSum=-2.105;QD=1.60;ReadPosRankSum=1.294;VQSLOD=1.3807;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:14:3.01:0,3,87	./.	./.	./.	0/1:17,0:5:0:0,0,0	0/0:28,2:17:12.04:0,12,369	0/1:36,0:9:0:0,0,0	0/0:30,0:2:6:0,6,150	0/0:38,5:24:14.84:0,15,391	0/0:46,1:13:36.12:0,36,1527	./.	0/1:47,1:26:82.35:82,0,474	0/1:58,1:32:99:225,0,310	0/0:51,0:21:14.63:0,15,329	0/0:56,0:25:18.06:0,18,386	0/1:68,1:30:99:131,0,537	0/0:31,0:17:9.03:0,9,285	0/0:22,0:13:24.08:0,24,585	0/0:15,0:2:6.02:0,6,292	0/0:13,0:2:6.02:0,6,149	0/0:78,0:30:11.76:0,12,328	0/0:29,0:9:0:0,0,0	./.	0/0:47,0:26:5.99:0,6,91	0/1:18,0:6:0.01:0,0,0	1/1:12,0:1:3.01:77,3,0	./.	./.
chr10	6982080	.	TTC	T	155.19	PASS	AB=0.905;AC=4;AF=0.083;AN=48;BaseQRankSum=-0.195;DP=1023;FS=4.917;HRun=0;HaplotypeScore=147.3372;InbreedingCoeff=0.3386;MQ=25.24;MQ0=361;MQRankSum=0.576;QD=3.53;ReadPosRankSum=-0.651;VQSLOD=2.5928;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:25:32.69:0,33,427	0/0:12,0:6:11.93:0,12,112	./.	./.	0/0:28,0:13:15.05:0,15,240	0/0:31,0:17:13.29:0,13,207	0/0:48,0:21:0:0,0,0	0/0:27,0:1:3.01:0,3,41	0/0:49,0:34:38.97:0,39,665	0/0:63,1:31:78.20:0,78,1231	./.	0/0:52,0:35:29.98:0,30,617	0/0:61,0:36:38.69:0,39,614	0/0:52,0:27:27.06:0,27,435	0/0:63,0:37:38.98:0,39,623	0/0:71,0:41:62.24:0,62,983	0/0:40,2:29:11.76:0,12,451	0/1:24,2:18:39.73:40,0,461	0/0:16,0:7:21.06:0,21,321	0/0:28,0:14:27.09:0,27,419	0/0:91,0:50:69.22:0,69,1088	0/0:35,0:21:15.05:0,15,214	0/0:21,0:8:12.04:0,12,179	0/0:53,0:35:21.02:0,21,343	0/0:18,0:9:15.05:0,15,231	0/1:13,2:5:36.30:140,0,36	./.	1/1:3,0:2:6.02:78,6,0
chr10	6982239	.	ACATTCT	A	827.23	PASS	AB=0.917;AC=15;AF=0.326;AN=46;BaseQRankSum=5.235;DP=447;FS=42.265;HRun=0;HaplotypeScore=92.7520;InbreedingCoeff=-0.0927;MQ=26.02;MQ0=182;MQRankSum=-3.912;QD=4.14;ReadPosRankSum=-0.609;VQSLOD=0.0048;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:6:5.41:0,5,56	./.	0/0:35,0:1:3.01:0,3,74	0/0:34,0:1:2.74:0,3,12	./.	0/1:11,2:6:16.33:65,0,16	1/1:8,0:4:2.04:6,2,0	0/0:26,1:4:11.96:0,12,318	0/1:9,1:7:26.90:54,0,27	0/0:16,0:2:3.01:0,3,45	./.	0/1:23,2:13:99:326,0,145	0/1:13,1:4:23.99:120,0,24	1/1:16,2:9:3.53:74,4,0	1/1:21,8:5:5.59:134,6,0	0/1:19,5:10:75.16:75,0,144	0/1:6,1:5:33.77:34,0,86	0/0:7,0:2:6.02:0,6,159	0/1:23,0:6:44.17:44,0,361	./.	0/1:15,0:10:20.65:21,0,132	0/1:12,0:2:6.21:6,0,15	0/0:5,0:1:0:0,0,0	0/0:10,1:6:0:0,0,1	./.	0/0:48,0:34:99:0,99,3189	0/0:22,0:18:36.01:0,36,1126	0/0:13,0:13:33.11:0,33,1139
chr10	6982241	.	ATTCT	A	679.30	PASS	AB=0.818;AC=15;AF=0.326;AN=46;BaseQRankSum=5.009;DP=444;FS=43.104;HRun=0;HaplotypeScore=94.9416;InbreedingCoeff=-0.0437;MQ=28.83;MQ0=179;MQRankSum=-4.227;QD=3.41;ReadPosRankSum=-0.104;VQSLOD=-0.3891;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:6:5.97:0,6,56	./.	0/0:34,0:2:6.02:0,6,103	0/0:36,0:3:5.75:0,6,88	./.	0/1:9,3:6:12.48:45,0,12	1/1:7,1:4:2.22:7,2,0	0/0:25,0:3:9.03:0,9,255	0/1:9,1:7:22.86:53,0,23	0/0:14,2:2:3.01:0,3,45	./.	0/1:15,11:13:99:266,0,135	0/1:12,2:4:25.89:84,0,26	1/1:12,6:9:3.95:56,4,0	1/1:20,8:4:5.79:112,6,0	0/1:13,10:10:91.44:91,0,127	0/1:5,2:5:42.08:42,0,68	0/0:8,0:3:8.70:0,9,158	0/1:19,3:6:44.14:44,0,333	./.	0/1:15,0:10:8.55:9,0,103	0/1:10,2:2:1.76:2,0,15	0/0:5,0:1:0:0,0,0	0/0:9,2:6:0.47:0,0,1	./.	0/0:48,0:34:99:0,99,2371	0/0:22,0:18:36.12:0,36,854	0/0:13,0:13:36.12:0,36,930
chr10	6982275	.	ACTCACACACACT	A	550.47	PASS	AB=0.936;AC=17;AF=0.304;AN=56;BaseQRankSum=4.640;DP=653;FS=29.611;HRun=0;HaplotypeScore=207.6296;InbreedingCoeff=-0.1100;MQ=33.20;MQ0=146;MQRankSum=-5.246;QD=1.66;ReadPosRankSum=-5.020;VQSLOD=-0.3620;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:15,0:10:99:103,0,198	0/0:8,0:6:15:0,15,343	0/0:29,0:3:9.03:0,9,249	0/0:37,0:5:8.53:0,9,144	0/1:12,0:6:7.14:7,0,69	0/0:21,1:17:21.43:0,21,640	1/1:13,0:3:1.55:4,2,0	0/1:27,0:5:29.96:30,0,120	0/1:12,3:12:96.52:97,0,411	0/0:29,0:14:20.01:0,20,1030	1/1:8,0:6:0.89:2,1,0	0/1:32,4:21:99:144,0,789	0/1:20,3:12:99:115,0,674	0/0:26,4:22:48.54:0,49,1388	0/1:39,4:19:36.27:36,0,821	0/1:47,2:30:77.18:77,0,1822	0/1:18,1:13:40.12:40,0,826	0/0:10,0:6:17.42:0,17,498	0/1:20,0:9:13.90:14,0,574	0/0:16,0:12:32.76:0,33,906	0/1:24,0:16:22.22:22,0,701	1/1:19,0:8:2.46:6,2,0	0/0:8,0:3:1.73:0,2,6	0/0:27,0:21:17.08:0,17,697	0/0:10,0:6:8.68:0,9,136	0/0:48,0:34:96.32:0,96,4196	0/0:28,0:23:48.95:0,49,1760	0/0:15,0:14:39.13:0,39,2040
chr10	6982302	.	T	TTC	1462.19	PASS	AB=0.978;AC=28;AF=0.538;AN=52;BaseQRankSum=5.548;DP=889;FS=21.591;HRun=0;HaplotypeScore=263.9072;InbreedingCoeff=-0.2485;MQ=31.50;MQ0=209;MQRankSum=2.066;QD=2.04;ReadPosRankSum=-6.491;VQSLOD=0.1261;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:15,10:17:12.01:124,0,12	0/1:12,0:8:7.49:7,0,51	./.	./.	1/1:24,0:16:29.25:141,29,0	0/1:28,0:22:42.46:120,0,42	1/1:32,0:12:2.73:15,3,0	0/1:48,0:5:16.81:19,0,17	0/1:20,0:13:29.32:32,0,29	0/1:51,0:34:13.48:13,0,123	1/1:17,0:15:19.04:91,19,0	0/1:55,1:38:68.43:110,0,68	0/1:33,0:18:43.41:72,0,43	0/1:42,0:31:30.49:94,0,30	0/1:61,0:36:65.74:66,0,70	0/1:68,0:47:31.77:172,0,32	0/1:32,0:24:30.96:31,0,101	0/1:12,0:9:44.59:45,0,58	0/0:19,0:10:8.29:0,8,73	0/1:31,0:22:36.60:112,0,37	0/1:39,0:29:24.82:80,0,25	1/1:25,0:13:23.50:105,24,0	1/1:13,0:9:19.11:86,19,0	1/1:30,0:25:16.37:59,16,0	0/1:17,0:12:11.08:35,0,11	0/0:45,0:34:78.24:0,78,980	0/0:25,0:23:23.28:0,23,301	0/0:14,0:12:24.02:0,24,281
chr10	6982317	.	A	ACT	1292.55	PASS	AB=0.978;AC=24;AF=0.462;AN=52;BaseQRankSum=4.914;DP=1010;FS=24.262;HRun=0;HaplotypeScore=278.4183;InbreedingCoeff=-0.0689;MQ=31.86;MQ0=228;MQRankSum=2.026;QD=1.95;ReadPosRankSum=3.106;VQSLOD=1.2412;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:16:12.40:0,12,100	0/1:13,0:9:3.25:3,0,76	./.	./.	1/1:28,0:20:27.30:134,27,0	0/1:33,0:26:49.42:84,0,49	0/1:38,0:14:8.46:8,0,13	0/0:60,0:8:2.12:0,2,43	0/1:23,2:18:29.93:64,0,30	0/0:59,0:41:15.48:0,15,270	1/1:19,0:19:19.12:91,19,0	0/1:46,4:36:70.48:128,0,70	0/1:36,1:23:39.63:112,0,40	0/1:44,2:37:25.85:88,0,26	0/1:65,1:40:86.58:87,0,95	0/1:64,2:49:26.26:157,0,26	0/1:41,1:33:42.91:43,0,128	0/1:15,0:12:7.42:7,0,90	0/0:16,1:11:11.24:0,11,79	0/1:38,0:31:34.20:113,0,34	0/1:47,1:35:65.73:66,0,110	1/1:28,0:16:19.27:95,19,0	1/1:14,0:11:19.06:84,19,0	1/1:33,0:28:17.19:62,17,0	0/1:21,0:14:8.44:35,0,8	0/0:51,0:36:99:0,102,1398	0/0:25,0:24:53.42:0,53,660	0/0:15,0:13:33.01:0,33,406
chr10	6982323	.	A	ACT	12479.33	PASS	AB=0.769;AC=37;AF=0.712;AN=52;BaseQRankSum=3.003;DP=1049;FS=55.895;HRun=0;HaplotypeScore=244.5153;InbreedingCoeff=0.1324;MQ=32.65;MQ0=224;MQRankSum=3.059;QD=14.63;ReadPosRankSum=2.156;VQSLOD=2.4848;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:16:14.78:148,0,15	0/1:9,4:9:32.69:135,0,33	./.	./.	1/1:5,22:20:35.19:551,35,0	0/1:22,14:30:11.41:520,0,11	0/1:23,17:17:8.92:93,0,9	0/1:61,3:11:5.72:155,0,6	0/1:15,11:20:15.58:252,0,16	1/1:37,20:41:0.97:1076,1,0	1/1:10,11:20:20.67:343,21,0	1/1:31,18:37:15.41:804,15,0	1/1:13,25:26:4.22:491,4,0	1/1:24,23:38:28.87:890,29,0	1/1:40,22:40:3.44:816,3,0	1/1:34,35:53:52.39:1436,52,0	0/1:15,29:37:48.14:602,0,48	0/1:11,5:13:32.49:199,0,32	1/1:10,9:11:17.62:435,18,0	1/1:19,21:33:11.56:675,12,0	1/1:34,19:39:14.75:1075,15,0	1/1:15,12:17:30.06:461,30,0	1/1:6,8:11:20.94:342,21,0	1/1:6,29:30:48.16:792,48,0	0/1:10,9:14:2.82:189,0,3	0/0:52,0:38:83.84:0,84,967	0/0:26,0:25:53.40:0,53,593	0/0:17,0:14:23.93:0,24,221
chr10	6982363	.	ACT	A	980.90	PASS	AB=0.970;AC=17;AF=0.304;AN=56;BaseQRankSum=-3.409;DP=1007;FS=3.280;HRun=0;HaplotypeScore=305.1168;InbreedingCoeff=-0.2811;MQ=36.18;MQ0=155;MQRankSum=2.097;QD=1.65;ReadPosRankSum=-4.282;VQSLOD=1.4969;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:32,0:24:22.63:23,0,81	1/1:10,0:8:3.92:40,4,0	0/0:51,0:1:3:0,3,25	0/0:52,1:1:3:0,3,28	0/0:29,1:29:20.19:0,20,76	0/1:32,0:26:0.17:0,0,56	0/1:41,3:26:8.21:99,0,8	0/0:30,0:7:1.36:0,1,3	0/1:36,1:31:15.74:30,0,16	0/1:51,4:48:89.06:224,0,89	0/0:23,0:22:15.54:0,16,57	0/1:52,1:48:47.97:76,0,48	0/1:28,0:24:27.07:27,0,48	0/1:37,0:34:28.83:29,0,94	0/0:61,3:54:15.18:0,15,145	0/1:56,4:54:69.82:70,0,156	0/1:37,1:35:75.51:84,0,76	0/1:14,1:14:50.79:82,0,51	0/1:20,0:12:15.69:16,0,36	0/1:36,1:32:61.04:97,0,61	0/1:53,2:48:13.26:230,0,13	0/0:25,2:21:19.43:0,19,73	0/0:20,1:19:12.05:0,12,39	0/1:34,1:34:5.51:6,0,23	0/0:18,1:16:9.28:0,9,43	0/0:43,1:40:61.67:0,62,1499	0/0:34,0:34:73.09:0,73,1145	0/0:15,0:13:33.04:0,33,458
chr10	6982646	.	T	TTCTC	621.70	PASS	AB=0.974;AC=12;AF=0.231;AN=52;BaseQRankSum=1.318;DP=1036;FS=34.791;HRun=0;HaplotypeScore=173.9225;InbreedingCoeff=0.1038;MQ=22.50;MQ0=408;MQRankSum=-0.281;QD=1.53;ReadPosRankSum=-1.225;VQSLOD=1.3795;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:6:0.12:0,0,0	0/0:12,0:8:5.07:0,5,120	./.	./.	0/0:48,7:44:5.04:0,5,35	0/0:23,2:10:2.44:0,2,20	0/0:33,4:10:1.84:0,2,52	0/0:42,0:11:21.07:0,21,367	0/1:32,1:11:28.86:29,0,98	0/1:65,3:43:99:448,0,1167	0/1:29,0:18:0.03:1,0,0	0/1:32,5:20:44.32:133,0,44	0/0:27,1:9:7.53:0,8,110	1/1:40,0:20:2.97:20,3,0	0/1:51,1:25:0.69:1,0,1	0/1:71,0:36:30.09:30,0,98	1/1:23,0:5:3.01:77,3,0	0/0:20,0:5:6.02:0,6,107	0/0:15,1:5:12.04:0,12,214	0/0:44,3:36:15.25:0,15,147	0/0:31,1:5:2.55:0,3,19	0/0:51,2:43:9.42:0,9,78	0/0:44,1:36:3.42:0,3,37	0/0:30,1:13:5.33:0,5,40	0/1:29,0:22:2.80:3,0,48	0/0:72,0:56:99:0,138,2343	0/0:35,0:28:40.16:0,40,636	0/0:16,0:16:27.09:0,27,479
chr10	6982652	.	CTCACACACAT	C	675.44	PASS	AB=0.973;AC=10;AF=0.192;AN=52;BaseQRankSum=1.788;DP=969;FS=42.436;HRun=0;HaplotypeScore=182.4521;InbreedingCoeff=-0.0920;MQ=22.67;MQ0=378;MQRankSum=-0.308;QD=2.16;ReadPosRankSum=-2.262;VQSLOD=1.2067;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:5:0.19:0,0,0	0/1:10,0:8:5.42:5,0,235	./.	./.	0/0:48,1:40:4.31:0,4,35	0/0:22,1:9:5.99:0,6,95	0/0:36,0:9:3.01:0,3,54	0/0:33,0:8:21.07:0,21,728	0/1:27,0:8:29.30:29,0,204	0/1:63,0:37:99:448,0,2726	0/0:25,1:15:2.66:0,3,67	0/1:35,1:20:99:124,0,217	0/1:25,2:9:79.22:79,0,309	0/1:33,1:16:10.95:11,0,128	0/0:47,2:23:8.02:0,8,242	0/1:62,4:32:25.88:26,0,374	1/1:21,1:6:3.01:77,3,0	0/0:18,0:4:6.02:0,6,320	0/0:17,0:5:12.04:0,12,442	0/0:41,2:32:22.93:0,23,439	0/0:28,0:6:2.94:0,3,19	0/0:45,2:37:11.63:0,12,236	0/0:38,5:33:5.84:0,6,89	0/0:28,2:14:8.13:0,8,39	0/1:26,1:19:0.22:0,0,216	0/0:71,0:56:99:0,154,6016	0/0:37,0:31:54.03:0,54,1881	0/0:17,0:17:33.11:0,33,1444
chr10	6982720	.	T	TTC	868.46	PASS	AB=0.796;AC=26;AF=0.520;AN=50;BaseQRankSum=3.778;DP=543;FS=22.869;HRun=0;HaplotypeScore=59.1865;InbreedingCoeff=0.4351;MQ=31.14;MQ0=121;MQRankSum=-5.493;QD=3.63;ReadPosRankSum=-1.902;VQSLOD=0.2872;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:11,1:8:1.78:33,2,0	1/1:3,3:3:3.01:50,3,0	0/0:38,0:8:17.30:0,17,257	0/0:42,0:12:30.05:0,30,358	./.	1/1:4,4:5:5.78:68,6,0	0/1:9,2:4:0:0,0,0	0/1:32,1:15:8.03:129,0,8	0/1:8,6:2:0:0,0,0	0/1:19,9:13:48.32:245,0,48	0/0:5,1:1:3.01:0,3,32	0/0:8,5:4:0:0,0,0	1/1:8,4:2:6.02:92,6,0	0/1:14,4:7:0:0,0,0	1/1:8,8:7:5.97:50,6,0	1/1:12,2:8:2.97:20,3,0	1/1:7,0:5:8.96:91,9,0	1/1:10,1:3:3.01:39,3,0	1/1:17,1:4:5.99:72,6,0	0/1:7,6:6:0.02:0,0,0	0/0:17,2:6:0:0,0,0	./.	./.	1/1:12,4:12:8.94:119,9,0	0/0:6,7:4:0:0,0,0	0/0:54,1:53:99:0,105,1631	0/0:45,0:44:74.75:0,75,1328	0/0:27,0:27:63.17:0,63,798
chr10	6982807	.	TCA	T	11227.67	PASS	AC=46;AF=0.885;AN=52;BaseQRankSum=7.696;DP=924;FS=1.593;HRun=0;HaplotypeScore=176.7027;InbreedingCoeff=0.9095;MQ=36.27;MQ0=209;MQRankSum=0.560;QD=15.32;ReadPosRankSum=-1.604;VQSLOD=4.3916;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:25,6:28:13.65:144,14,0	1/1:6,5:8:15.01:170,15,0	./.	./.	1/1:12,8:16:24.04:271,24,0	1/1:7,12:13:21.07:262,21,0	1/1:19,12:26:24.02:280,24,0	1/1:26,15:11:7.15:267,7,0	1/1:17,24:33:63.09:738,63,0	1/1:19,22:34:81.20:970,81,0	1/1:3,17:16:24.08:300,24,0	1/1:12,28:28:54.06:645,54,0	1/1:9,12:15:31.20:323,31,0	1/1:16,26:33:54.07:639,54,0	1/1:26,24:43:63.01:863,63,0	1/1:18,36:43:93.17:1095,93,0	1/1:10,18:21:51.16:626,51,0	1/1:5,7:10:5.05:259,5,0	1/1:11,7:8:21.07:261,21,0	1/1:11,17:24:45.09:529,45,0	1/1:34,36:52:65.96:959,66,0	1/1:13,15:19:18.01:207,18,0	1/1:8,18:23:42.05:486,42,0	1/1:17,20:28:41.98:465,42,0	1/1:5,18:20:39.02:469,39,0	0/0:53,2:41:73.67:0,74,1602	0/0:38,0:32:63.17:0,63,972	0/0:26,0:24:51.17:0,51,832
chr10	6982889	.	TCTCTCACACA	T	8060.64	PASS	AB=0.890;AC=42;AF=0.750;AN=56;BaseQRankSum=8.111;DP=728;FS=39.746;HRun=0;HaplotypeScore=241.6174;InbreedingCoeff=0.6283;MQ=42.09;MQ0=47;MQRankSum=-0.927;QD=15.18;ReadPosRankSum=-0.982;VQSLOD=2.4158;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:37,5:39:35.12:35,0,833	1/1:4,5:7:14.95:226,15,0	0/0:37,0:15:42.02:0,42,1108	0/0:65,0:31:54.05:0,54,923	1/1:11,6:15:18.02:279,18,0	1/1:10,4:11:15.03:249,15,0	1/1:11,7:10:17.92:140,18,0	0/1:37,5:29:99:559,0,132	1/1:19,8:24:44.62:645,45,0	1/1:23,8:19:53.50:767,54,0	1/1:9,8:15:20.97:308,21,0	1/1:24,6:24:42.03:721,42,0	1/1:7,9:8:14.92:203,15,0	1/1:12,7:15:18.02:233,18,0	1/1:15,14:23:36.70:657,37,0	1/1:27,9:31:41.68:614,42,0	1/1:16,4:13:21.99:281,22,0	0/1:12,1:12:3.60:132,0,4	0/1:9,2:6:8.02:182,0,8	1/1:7,5:9:17.95:228,18,0	1/1:43,4:41:63.89:608,64,0	1/1:1,28:20:15.05:365,15,0	1/1:9,8:12:11.97:192,12,0	1/1:17,5:19:12.46:121,12,0	1/1:8,5:12:21.45:317,21,0	0/0:45,0:45:99:0,129,4578	0/0:26,0:26:66.14:0,66,2675	0/0:24,0:24:72.19:0,72,2913
chr10	6982974	.	TTC	T	15630.76	PASS	AB=0.773;AC=45;AF=0.804;AN=56;BaseQRankSum=7.590;DP=1031;FS=6.175;HRun=0;HaplotypeScore=213.0934;InbreedingCoeff=0.8849;MQ=41.73;MQ0=78;MQRankSum=-4.079;QD=19.04;ReadPosRankSum=3.390;VQSLOD=4.5815;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:53,22:72:99:673,0,825	1/1:8,4:9:23.68:255,24,0	0/0:52,0:13:32.84:0,33,488	0/0:48,0:12:27.70:0,28,324	1/1:13,14:20:32.87:387,33,0	1/1:10,16:22:44.86:561,45,0	1/1:18,17:31:80.93:973,81,0	1/1:65,20:47:69.16:842,69,0	1/1:13,25:31:84.26:1064,84,0	1/1:24,29:41:98.97:1186,99,0	1/1:4,10:13:24:308,24,0	1/1:10,29:33:78.21:981,78,0	1/1:5,22:23:54.14:675,54,0	1/1:10,28:30:75.24:959,75,0	1/1:23,34:49:97.30:1203,97,0	1/1:8,34:35:96.28:1215,96,0	1/1:9,15:20:55.41:621,55,0	1/1:10,7:13:29.25:338,29,0	1/1:14,10:14:30.10:386,30,0	1/1:16,13:22:48.03:558,48,0	1/1:23,26:44:66.18:759,66,0	1/1:19,14:24:48.14:598,48,0	1/1:13,7:12:23.99:268,24,0	1/1:18,19:30:32.52:423,33,0	1/1:10,10:19:33.07:401,33,0	0/0:59,0:58:99:0,153,2298	0/0:25,0:24:69.21:0,69,1077	0/0:26,0:26:63.19:0,63,1006
chr10	6983010	.	TTC	T	13775.51	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=6.393;DP=936;FS=1.081;HRun=0;HaplotypeScore=279.0441;InbreedingCoeff=0.9708;MQ=53.80;MQ0=5;MQRankSum=-4.533;QD=20.53;ReadPosRankSum=-0.599;VQSLOD=4.5055;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:87:99:0,189,2179	1/1:3,6:9:15.05:183,15,0	0/0:37,0:31:49.83:0,50,728	0/0:44,0:31:26.19:0,26,613	1/1:8,13:19:23.88:287,24,0	1/1:11,20:29:63.20:791,63,0	1/1:13,25:35:66.16:801,66,0	1/1:30,22:43:75.23:924,75,0	1/1:8,28:35:81.16:981,81,0	1/1:23,22:41:87.21:1016,87,0	1/1:6,6:10:6.02:76,6,0	1/1:12,32:43:96.28:1180,96,0	1/1:9,22:28:60.18:743,60,0	1/1:16,21:33:51.03:620,51,0	1/1:15,41:56:99:1548,126,0	1/1:19,34:50:99:1296,111,0	1/1:15,9:24:39.04:451,39,0	1/1:1,9:10:30.05:361,30,0	1/1:9,7:15:38.63:421,39,0	1/1:8,11:17:30.02:343,30,0	1/1:19,17:40:58.34:650,58,0	1/1:8,17:16:24.06:289,24,0	1/1:7,7:11:15.03:174,15,0	1/1:17,14:29:26.77:339,27,0	1/1:10,10:20:24.08:303,24,0	0/0:44,1:45:76.49:0,76,1715	0/0:26,0:25:57.18:0,57,909	0/0:22,0:22:54.14:0,54,867
chr10	6983084	.	T	TCA	12359.28	PASS	AB=1.000;AC=45;AF=0.804;AN=56;BaseQRankSum=0.649;DP=911;FS=8.924;HRun=0;HaplotypeScore=341.6219;InbreedingCoeff=0.8152;MQ=46.36;MQ0=22;MQRankSum=3.556;QD=16.57;ReadPosRankSum=6.157;VQSLOD=3.4131;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:77,0:77:28.14:258,0,28	1/1:5,1:4:3.01:51,3,0	0/0:42,0:18:43.80:0,44,394	0/0:46,0:26:22.72:0,23,317	1/1:12,6:16:23.29:243,23,0	1/1:14,17:30:40.01:644,40,0	1/1:21,12:31:71.42:1015,71,0	1/1:42,2:29:33.55:269,34,0	1/1:14,27:38:71.29:1189,71,0	1/1:14,15:26:71.96:934,72,0	1/1:7,8:12:14.55:176,15,0	1/1:22,20:39:57.80:836,58,0	1/1:12,13:21:19.21:530,19,0	1/1:18,27:42:40.05:691,40,0	1/1:25,36:56:69.60:1205,70,0	1/1:23,25:40:51.86:759,52,0	1/1:15,11:24:25.40:493,25,0	1/1:9,8:16:33.50:465,33,0	1/1:16,5:14:10.72:359,11,0	1/1:14,12:24:19.87:407,20,0	1/1:25,16:39:53.93:721,54,0	1/1:12,13:20:15.77:274,16,0	1/1:12,10:19:10.25:186,10,0	1/1:13,16:27:14.78:199,15,0	1/1:13,11:22:10.27:459,10,0	0/0:39,0:39:96.12:0,96,1130	0/0:18,0:16:38.92:0,39,413	0/0:20,0:20:59.84:0,60,624
chr10	6983109	.	T	TTC	18098.13	PASS	AB=0.806;AC=51;AF=0.911;AN=56;BaseQRankSum=1.610;DP=851;FS=9.914;HRun=0;HaplotypeScore=299.0715;InbreedingCoeff=0.7252;MQ=48.99;MQ0=14;MQRankSum=-5.126;QD=23.00;ReadPosRankSum=-3.546;VQSLOD=3.0981;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:57,18:74:99:644,0,1098	1/1:1,5:4:9.03:113,9,0	0/0:27,0:13:28.26:0,28,307	0/0:36,0:23:43.96:0,44,603	1/1:5,9:12:27.09:434,27,0	1/1:9,17:25:51.17:755,51,0	1/1:19,17:35:69.18:1034,69,0	1/1:15,40:42:89.97:1485,90,0	1/1:24,19:40:69.05:1004,69,0	1/1:15,17:27:63.06:985,63,0	1/1:5,10:13:17.82:289,18,0	1/1:15,19:31:50.69:670,51,0	1/1:15,9:19:39.10:531,39,0	1/1:16,28:42:83.56:1176,84,0	1/1:23,34:52:94.68:1274,95,0	1/1:16,32:41:87.19:1211,87,0	1/1:14,7:19:15.75:331,16,0	1/1:10,4:13:17.89:266,18,0	1/1:9,7:12:35.95:530,36,0	1/1:5,9:13:28.32:331,28,0	1/1:30,14:42:48.98:648,49,0	1/1:7,19:24:51.03:689,51,0	1/1:6,9:13:14.54:207,15,0	1/1:17,8:22:8.94:92,9,0	1/1:11,14:22:48.12:677,48,0	1/1:6,34:40:99:1637,102,0	1/1:3,17:17:32.80:543,33,0	1/1:2,14:17:33.11:544,33,0
chr10	6983164	.	TCA	T	18906.75	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-2.672;DP=1097;FS=0.381;HRun=0;HaplotypeScore=295.7304;InbreedingCoeff=0.9959;MQ=50.35;MQ0=25;MQRankSum=-0.751;QD=20.89;ReadPosRankSum=3.465;VQSLOD=4.3417;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:31,49:79:99:1698,135,0	1/1:8,7:14:36.11:450,36,0	0/0:49,0:21:26.90:0,27,438	0/0:47,0:27:44.94:0,45,608	1/1:12,9:20:33.03:371,33,0	1/1:10,17:27:54.01:609,54,0	1/1:9,27:37:57.10:691,57,0	1/1:55,8:47:24.37:775,24,0	1/1:15,24:37:90.28:1125,90,0	1/1:17,28:41:99:1310,108,0	1/1:13,8:21:33.52:392,34,0	1/1:13,24:37:83.92:1005,84,0	1/1:16,27:40:96.28:1194,96,0	1/1:17,31:48:88.94:1059,89,0	1/1:29,39:67:99:1162,100,0	1/1:26,28:51:90.32:1054,90,0	1/1:11,13:24:15.89:559,16,0	1/1:11,13:25:59.56:717,60,0	1/1:21,6:14:30.57:380,31,0	1/1:11,11:20:41.55:525,42,0	1/1:43,37:74:99:1632,120,0	1/1:14,19:30:48.07:552,48,0	1/1:13,8:19:30.08:372,30,0	1/1:22,18:39:43.77:578,44,0	1/1:15,18:28:55.59:697,56,0	0/0:43,0:42:99:0,108,1768	0/0:26,0:25:54.18:0,54,888	0/0:25,0:25:40.41:0,40,768
chr10	6983242	.	T	TCACA	3212.34	PASS	AB=0.910;AC=8;AF=0.143;AN=56;BaseQRankSum=2.688;DP=1127;FS=1.584;HRun=0;HaplotypeScore=369.8446;InbreedingCoeff=0.7541;MQ=47.14;MQ0=27;MQRankSum=-8.673;QD=18.05;ReadPosRankSum=-0.447;VQSLOD=2.4441;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:50,0:61:51.48:51,0,911	0/0:22,0:20:42.14:0,42,691	0/1:36,0:6:0.77:1,0,134	0/0:53,0:18:11.94:0,12,491	0/0:37,0:36:66.55:0,67,1070	0/0:32,0:30:59.98:0,60,831	0/0:34,0:32:72.25:0,72,1087	0/0:49,0:33:66.21:0,66,1093	0/0:39,0:38:63.60:0,64,993	0/0:52,0:48:99:0,120,2027	0/0:17,0:16:23.97:0,24,369	0/0:41,0:40:63.13:0,63,966	0/0:43,0:41:87.12:0,87,1331	0/0:52,0:51:99:0,109,1695	0/0:79,0:76:99:0,129,1952	0/0:53,0:50:87.43:0,87,1346	0/0:24,0:24:48.62:0,49,777	0/0:16,0:16:23.89:0,24,489	0/0:27,0:12:27.07:0,27,411	0/0:33,0:30:66.14:0,66,1088	0/0:97,0:92:99:0,178,2933	0/0:32,0:27:69.14:0,69,1100	0/0:29,0:27:57.62:0,58,977	0/0:52,0:52:66.94:0,67,1115	0/0:33,0:32:61.08:0,61,948	1/1:18,21:38:44.35:1857,44,0	1/1:13,9:21:39.09:836,39,0	1/1:9,8:17:25.93:616,26,0
chr10	6983282	.	T	TCA	21710.55	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=0.407;DP=1010;FS=5.772;HRun=0;HaplotypeScore=323.4778;InbreedingCoeff=0.8470;MQ=49.71;MQ0=10;MQRankSum=2.692;QD=23.34;ReadPosRankSum=2.907;VQSLOD=4.3350;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:29,21:48:50.35:681,50,0	1/1:3,17:18:21.07:336,21,0	0/0:33,0:18:1.71:0,2,138	0/0:47,0:26:36.03:0,36,451	1/1:18,21:39:50.77:819,51,0	1/1:20,14:33:54.01:760,54,0	1/1:15,17:33:59.16:967,59,0	1/1:23,10:29:45.08:614,45,0	1/1:3,30:32:50.62:837,51,0	1/1:25,18:42:90.10:1334,90,0	1/1:6,11:17:14.73:250,15,0	1/1:17,26:42:71.25:1073,71,0	1/1:12,17:29:24.36:849,24,0	1/1:31,26:56:93.09:1371,93,0	1/1:29,45:73:91.18:1590,91,0	1/1:6,50:57:80.86:1319,81,0	1/1:6,12:18:17.03:544,17,0	1/1:7,5:12:11.93:351,12,0	1/1:13,7:14:32.52:435,33,0	1/1:13,17:25:45.06:664,45,0	1/1:49,32:76:99:1847,113,0	1/1:7,19:26:23.91:401,24,0	1/1:12,9:20:38.73:594,39,0	1/1:23,22:45:41.93:592,42,0	1/1:10,18:26:38.94:595,39,0	1/1:18,22:40:93.19:1395,93,0	1/1:11,18:28:63.06:901,63,0	1/1:7,8:15:44.96:591,45,0
chr10	6983326	.	T	TCACA	11798.76	PASS	AB=0.985;AC=45;AF=0.804;AN=56;BaseQRankSum=0.627;DP=960;FS=7.839;HRun=0;HaplotypeScore=395.6135;InbreedingCoeff=0.6317;MQ=42.17;MQ0=21;MQRankSum=-0.076;QD=14.41;ReadPosRankSum=-1.512;VQSLOD=3.3918;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:28:7.12:69,7,0	1/1:14,0:14:12:122,12,0	0/0:36,0:12:18.05:0,18,253	0/0:52,0:13:16.54:0,17,216	1/1:24,7:31:17.57:288,18,0	1/1:25,1:26:21.03:300,21,0	1/1:32,0:31:48.42:803,48,0	1/1:53,7:43:42.83:1253,43,0	1/1:23,3:26:33.81:358,34,0	1/1:35,3:36:77.28:1142,77,0	1/1:19,2:20:23.48:331,23,0	1/1:41,4:44:74.84:1088,75,0	1/1:27,2:29:27.55:413,28,0	1/1:38,6:45:18.68:619,19,0	1/1:68,8:76:62.08:821,62,0	1/1:59,3:62:74.02:801,74,0	0/1:20,1:21:15.22:348,0,15	0/1:13,0:13:40.52:224,0,41	1/1:28,1:21:48.06:672,48,0	1/1:23,1:20:32.85:332,33,0	1/1:49,2:52:15.15:557,15,0	1/1:22,2:24:26.88:310,27,0	1/1:22,1:21:22.53:208,23,0	1/1:37,2:39:20.08:314,20,0	1/1:21,7:26:29.69:407,30,0	0/0:42,0:39:56.46:0,56,605	0/1:26,0:26:18.87:19,0,232	0/0:11,0:10:26.38:0,26,140
chr10	6983338	.	A	ACT	2683.30	PASS	AB=0.996;AC=10;AF=0.179;AN=56;BaseQRankSum=-9.572;DP=909;FS=6.256;HRun=0;HaplotypeScore=380.9657;InbreedingCoeff=0.4647;MQ=39.58;MQ0=24;MQRankSum=2.669;QD=11.72;ReadPosRankSum=-4.165;VQSLOD=2.1643;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:26:6.50:0,7,80	0/0:12,0:12:8.27:0,8,38	0/0:25,0:8:6.42:0,6,79	0/0:46,0:12:9.05:0,9,85	0/0:27,0:26:7.50:0,8,37	0/1:21,0:21:1.90:2,0,52	0/0:34,0:32:24.42:0,24,126	0/1:54,0:37:10.57:11,0,114	0/0:26,0:25:19.05:0,19,129	0/0:35,0:34:24.59:0,25,261	0/0:22,0:20:13.59:0,14,68	0/1:43,0:41:13.41:13,0,193	0/0:26,0:24:28.43:0,28,197	0/0:44,0:41:33.52:0,34,183	0/0:73,0:71:35.62:0,36,235	0/0:56,0:55:40.47:0,40,284	0/1:20,0:19:13.56:14,0,96	0/0:13,0:13:5.47:0,5,136	0/0:29,0:21:28.77:0,29,181	0/0:22,0:20:25.66:0,26,144	0/0:50,0:47:39.21:0,39,206	0/0:24,0:22:22.15:0,22,123	0/0:24,0:21:11.70:0,12,106	0/0:35,0:35:15.79:0,16,76	0/0:26,0:24:18.13:0,18,101	1/1:29,16:42:94.38:1313,94,0	1/1:20,10:29:71.88:949,72,0	1/1:8,7:14:39:536,39,0
chr10	6983348	.	TCACA	T	4517.26	PASS	AB=0.852;AC=37;AF=0.661;AN=56;BaseQRankSum=-2.311;DP=880;FS=1.291;HRun=0;HaplotypeScore=365.6446;InbreedingCoeff=0.2294;MQ=40.03;MQ0=23;MQRankSum=4.261;QD=6.35;ReadPosRankSum=3.209;VQSLOD=2.5249;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:29:19.94:20,0,89	1/1:11,1:12:7.78:62,8,0	0/0:28,0:8:3.83:0,4,173	0/0:48,0:13:17.59:0,18,217	1/1:24,3:25:8.37:70,8,0	1/1:21,1:22:1.75:82,2,0	1/1:21,7:26:26.69:230,27,0	0/1:24,19:27:34.75:487,0,35	0/1:21,5:26:1.30:119,0,1	1/1:33,2:33:6.71:443,7,0	1/1:16,5:18:9.20:91,9,0	0/1:39,5:41:12.30:235,0,12	0/1:24,3:25:11.86:187,0,12	1/1:31,5:35:12.12:159,12,0	1/1:57,8:64:14.21:528,14,0	1/1:46,7:53:12.01:256,12,0	0/1:15,2:17:52.07:115,0,52	0/1:10,1:11:63.50:63,0,118	1/1:24,4:20:45.26:511,45,0	1/1:20,2:19:9.57:143,10,0	0/1:42,4:45:5.29:231,0,5	1/1:18,5:21:7.39:130,7,0	0/1:16,5:20:4.73:77,0,5	1/1:35,1:36:17.79:128,18,0	1/1:22,2:22:13.57:152,14,0	0/0:44,0:41:72.72:0,73,2069	0/0:32,0:31:74.92:0,75,1394	0/0:17,0:16:45.15:0,45,904
chr10	6983375	.	T	TTCTCTC	9984.09	PASS	AB=0.945;AC=41;AF=0.732;AN=56;BaseQRankSum=-4.952;DP=910;FS=4.383;HRun=0;HaplotypeScore=348.0703;InbreedingCoeff=0.5970;MQ=39.36;MQ0=20;MQRankSum=-1.388;QD=13.51;ReadPosRankSum=-7.348;VQSLOD=1.9883;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:25:6.49:113,6,0	1/1:12,2:15:28.35:434,28,0	0/0:41,0:7:12.04:0,12,233	0/0:43,0:13:11.87:0,12,227	1/1:21,5:24:7.31:121,7,0	1/1:11,5:15:9.01:214,9,0	1/1:28,3:30:9.96:222,10,0	0/1:47,0:32:12.12:713,0,12	1/1:19,5:28:36.58:901,37,0	1/1:32,5:34:53.64:1119,54,0	1/1:19,0:19:5.77:118,6,0	1/1:42,6:48:63.33:1353,63,0	1/1:27,3:32:47.05:856,47,0	1/1:34,2:34:18.28:317,18,0	1/1:53,6:61:38.72:723,39,0	1/1:46,3:51:18.51:674,19,0	0/1:14,2:14:20.02:230,0,20	0/0:11,1:12:5.57:0,6,65	1/1:23,2:22:32.27:711,32,0	1/1:24,2:25:21.05:379,21,0	0/1:48,3:49:33.04:263,0,33	1/1:24,3:25:10.36:175,10,0	1/1:27,3:27:7.41:99,7,0	1/1:35,4:41:10.09:147,10,0	1/1:16,3:18:6.01:101,6,0	0/0:37,0:34:75.67:0,76,1225	0/0:23,0:22:39.13:0,39,668	0/0:14,0:14:27.09:0,27,415
chr10	6983390	.	TCTCACA	T	2195.74	PASS	AB=1.000;AC=8;AF=0.143;AN=56;BaseQRankSum=-2.661;DP=891;FS=1.013;HRun=0;HaplotypeScore=328.7484;InbreedingCoeff=0.7029;MQ=37.06;MQ0=15;MQRankSum=-0.203;QD=22.41;ReadPosRankSum=3.927;VQSLOD=2.7009;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:21:4.99:0,5,79	0/0:16,0:15:32.88:0,33,654	0/0:32,0:6:11.71:0,12,93	0/0:35,0:10:20.84:0,21,230	0/0:33,0:29:40.47:0,40,824	0/0:15,0:13:16.86:0,17,340	0/0:32,0:30:31.80:0,32,719	0/0:40,0:31:82.59:0,83,935	0/0:32,0:31:47.60:0,48,968	0/0:33,0:30:67.46:0,67,1086	0/0:22,0:20:10.96:0,11,153	0/0:54,0:50:71.50:0,72,1234	0/0:38,0:37:83.68:0,84,1579	0/0:35,0:32:28.42:0,28,569	0/0:72,0:70:86.76:0,87,1803	0/0:57,0:56:71.07:0,71,1119	0/1:16,0:14:1.40:1,0,488	0/1:10,0:9:26.03:26,0,166	0/0:22,0:19:47.15:0,47,753	0/0:28,0:26:29.24:0,29,543	0/0:52,0:49:34:0,34,803	0/0:26,0:21:17.69:0,18,455	0/0:32,0:28:15.79:0,16,269	0/0:43,0:40:23.61:0,24,600	0/0:20,0:20:19.98:0,20,304	1/1:32,4:37:84.47:1125,84,0	1/1:20,3:22:56.93:773,57,0	1/1:8,1:9:27.03:418,27,0
chr10	6985276	.	G	GT	11031.66	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-12.227;DP=620;FS=1.931;HRun=9;HaplotypeScore=70.4878;InbreedingCoeff=0.9332;MQ=76.79;MQ0=2;MQRankSum=0.986;QD=24.03;ReadPosRankSum=4.093;VQSLOD=5.5940;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,1:25:35.80:0,36,534	1/1:2,11:14:19.81:383,20,0	0/0:45,0:28:26.23:0,26,325	0/0:36,0:24:8.22:0,8,227	1/1:5,26:32:74.99:792,75,0	1/1:4,15:19:17:406,17,0	1/1:2,11:13:24.06:265,24,0	1/1:8,39:49:99:1242,117,0	1/1:1,9:10:24.06:265,24,0	1/1:5,11:17:35.76:358,36,0	1/1:5,16:22:1.93:455,2,0	1/1:3,21:24:34.11:605,34,0	1/1:2,14:16:36.10:398,36,0	1/1:5,19:24:57.15:631,57,0	1/1:0,24:24:69.19:763,69,0	1/1:4,14:18:27.07:299,27,0	1/1:9,17:26:25.12:502,25,0	1/1:3,22:26:56.99:612,57,0	1/1:2,12:13:33.08:358,33,0	1/1:5,27:33:60.85:841,61,0	1/1:2,5:7:12.02:126,12,0	1/1:2,16:18:45.12:496,45,0	1/1:5,17:22:28.06:525,28,0	1/1:1,8:10:20.89:213,21,0	1/1:2,19:21:45.12:498,45,0	0/0:22,0:22:54:0,54,489	0/0:14,0:14:26.91:0,27,234	0/0:16,0:16:24:0,24,208
chr10	6985310	.	C	CTTTTTT	2960.50	PASS	AB=0.533;AC=5;AF=0.089;AN=56;BaseQRankSum=-4.038;DP=583;FS=5.290;HRun=6;HaplotypeScore=138.9034;InbreedingCoeff=0.8811;MQ=62.13;MQ0=3;MQRankSum=-7.895;QD=46.99;ReadPosRankSum=1.498;VQSLOD=0.4083;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:84.11:0,84,1596	0/0:16,0:16:39.11:0,39,786	0/0:25,0:18:36.83:0,37,617	0/0:39,0:24:43.99:0,44,768	0/0:25,0:25:65.89:0,66,1222	0/0:16,0:16:39.07:0,39,678	0/0:16,0:16:45.11:0,45,861	0/0:28,0:28:59.92:0,60,961	0/0:14,0:14:39.08:0,39,720	0/0:20,0:19:54.16:0,54,1006	0/0:16,0:16:42.11:0,42,769	0/0:26,0:26:69.15:0,69,1247	0/0:14,0:14:42.09:0,42,736	0/0:16,0:16:48.11:0,48,818	0/0:30,0:30:81.24:0,81,1541	0/0:15,0:15:38.92:0,39,729	0/0:22,0:22:51.14:0,51,983	0/0:26,0:26:60.06:0,60,1075	0/0:18,0:17:48.14:0,48,863	0/0:27,0:27:63.13:0,63,1174	0/0:4,0:4:12.04:0,12,242	0/0:15,0:15:39.10:0,39,735	0/0:22,0:22:60.05:0,60,1097	0/0:15,0:15:39.07:0,39,659	0/0:23,0:23:57.10:0,57,1040	0/1:3,19:24:0.42:1398,0,0	1/1:0,17:22:30.57:974,31,0	1/1:0,15:17:21.07:718,21,0
chr10	6985553	.	A	AG	2783.28	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=11.048;DP=540;FS=7.713;HRun=0;HaplotypeScore=57.4260;InbreedingCoeff=0.9769;MQ=53.01;MQ0=10;MQRankSum=-2.447;QD=42.17;ReadPosRankSum=2.814;VQSLOD=4.1798;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,114,1572	0/0:13,0:13:36.11:0,36,486	0/0:14,0:6:14.96:0,15,168	0/0:17,0:7:15.03:0,15,181	0/0:20,0:20:57.19:0,57,789	0/0:21,0:21:63.21:0,63,879	0/0:19,0:19:54.18:0,54,754	0/0:27,0:24:72.23:0,72,991	0/0:10,0:10:30.10:0,30,418	0/0:24,0:23:69.23:0,69,964	0/0:8,0:8:18.06:0,18,245	0/0:13,0:13:39.13:0,39,545	0/0:18,0:18:51.17:0,51,712	0/0:17,0:17:48.16:0,48,668	0/0:19,0:19:57.19:0,57,796	0/0:25,0:25:69.23:0,69,964	0/0:31,0:31:93.29:0,93,1277	0/0:16,0:16:45.15:0,45,629	0/0:13,0:11:30.10:0,30,419	0/0:16,0:16:42.14:0,42,587	0/0:37,0:37:99:0,111,1552	0/0:7,0:7:18.06:0,18,251	0/0:10,0:10:30.10:0,30,419	0/0:23,0:23:66.21:0,66,904	0/0:16,0:15:45.15:0,45,629	1/1:1,18:19:15.22:820,15,0	1/1:0,31:31:84.29:1339,84,0	1/1:0,16:16:48.16:765,48,0
chr10	6986216	.	T	TA	366.97	PASS	AB=0.857;AC=3;AF=0.054;AN=56;BaseQRankSum=-0.641;DP=409;FS=0.832;HRun=10;HaplotypeScore=49.9976;InbreedingCoeff=0.5767;MQ=68.73;MQ0=0;MQRankSum=-1.043;QD=11.84;ReadPosRankSum=-2.180;VQSLOD=2.3021;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,19:25:25.43:444,25,0	0/0:8,0:8:16.79:0,17,128	0/1:5,1:6:28.45:28,0,40	0/0:16,0:15:15.87:0,16,100	0/0:12,0:12:23.96:0,24,197	0/0:12,0:12:29.95:0,30,246	0/0:16,0:16:41.94:0,42,345	0/0:18,0:19:17.08:0,17,237	0/0:14,0:15:40.99:0,41,326	0/0:16,0:16:18.56:0,19,290	0/0:12,0:12:34.68:0,35,263	0/0:14,0:17:40.79:0,41,315	0/0:14,0:15:43.95:0,44,342	0/0:18,0:18:50.78:0,51,403	0/0:15,0:15:41.82:0,42,328	0/0:16,0:16:47.94:0,48,394	0/0:25,0:26:67.67:0,68,524	0/0:16,0:16:41.90:0,42,337	0/0:15,1:18:11.04:0,11,275	0/0:8,0:8:17.98:0,18,148	0/0:9,0:9:20.96:0,21,170	0/0:6,0:6:17.91:0,18,140	0/0:11,0:11:14.97:0,15,123	0/0:18,0:18:50.84:0,51,403	0/0:15,0:15:10.45:0,10,191	0/0:21,0:21:47.90:0,48,388	0/0:16,0:16:35.95:0,36,295	0/0:7,0:7:20.98:0,21,172
chr10	6986366	.	T	TG	11118.14	PASS	AC=48;AF=0.889;AN=54;BaseQRankSum=-6.346;DP=347;FS=2.242;HRun=5;HaplotypeScore=33.2499;InbreedingCoeff=0.9037;MQ=80.89;MQ0=0;MQRankSum=-3.959;QD=36.45;ReadPosRankSum=1.283;VQSLOD=4.2853;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:60.18:0,60,719	./.	0/0:7,0:7:17.99:0,18,197	0/0:14,0:14:36.54:0,37,415	1/1:0,9:9:15.05:209,15,0	1/1:0,2:2:6.02:83,6,0	1/1:0,23:23:63.21:882,63,0	1/1:1,15:16:45.15:629,45,0	1/1:0,4:4:12.04:168,12,0	1/1:1,13:14:36.12:503,36,0	1/1:0,7:7:15.05:201,15,0	1/1:0,12:12:30.10:420,30,0	1/1:1,7:8:21.07:293,21,0	1/1:0,9:9:21.07:294,21,0	1/1:0,5:5:15.05:210,15,0	1/1:0,5:5:12.04:168,12,0	1/1:4,22:26:75.25:1047,75,0	1/1:1,19:20:57.19:798,57,0	1/1:0,16:16:45.15:624,45,0	1/1:0,5:5:12.04:167,12,0	1/1:2,45:47:99:1596,114,0	1/1:1,13:14:36.12:501,36,0	1/1:0,6:6:15.05:210,15,0	1/1:0,17:16:39.13:546,39,0	1/1:0,9:9:27.09:376,27,0	1/1:1,16:17:45.11:606,45,0	1/1:0,6:6:18.06:252,18,0	1/1:0,8:8:24.08:336,24,0
chr10	6986543	.	G	GC	10738.20	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-2.831;DP=348;FS=1.822;HRun=2;HaplotypeScore=78.3084;InbreedingCoeff=0.6847;MQ=56.74;MQ0=0;MQRankSum=-4.315;QD=33.14;ReadPosRankSum=0.466;VQSLOD=4.8888;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:51.13:0,51,605	1/1:1,4:5:12.04:173,12,0	0/0:1,0:1:3.01:0,3,37	0/0:6,0:6:12.03:0,12,140	1/1:2,4:6:11.55:170,12,0	1/1:2,9:11:24.07:326,24,0	1/1:3,35:38:99:1468,105,0	1/1:0,17:17:36.12:517,36,0	1/1:1,3:4:9.03:129,9,0	1/1:1,12:13:36.12:518,36,0	1/1:2,2:4:3.01:43,3,0	1/1:3,16:19:45.15:646,45,0	1/1:5,8:13:33.08:437,33,0	1/1:1,10:11:30.10:429,30,0	1/1:1,3:4:9.03:127,9,0	1/1:2,4:6:15.04:198,15,0	1/1:3,17:20:51.08:707,51,0	1/1:5,19:24:63.21:904,63,0	1/1:2,18:20:60.20:859,60,0	1/1:0,2:2:6.02:86,6,0	1/1:10,40:50:83.96:1147,84,0	1/1:2,3:5:9.01:110,9,0	1/1:0,11:11:18.06:258,18,0	1/1:2,6:8:24.05:307,24,0	1/1:1,8:9:24.08:340,24,0	1/1:5,15:20:51.16:710,51,0	1/1:0,2:2:3.01:43,3,0	1/1:0,2:2:6.02:86,6,0
chr10	6987544	.	CAG	C	16291.62	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-2.293;DP=614;FS=4.583;HRun=0;HaplotypeScore=114.0377;InbreedingCoeff=0.9931;MQ=81.38;MQ0=5;MQRankSum=-9.434;QD=29.89;ReadPosRankSum=6.553;VQSLOD=6.2039;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,44:55:99:1453,117,0	1/1:1,10:11:30.10:378,30,0	0/0:29,1:29:25.26:0,25,882	0/0:39,0:34:53.25:0,53,987	1/1:4,24:28:69.22:870,69,0	1/1:2,19:21:57.18:719,57,0	1/1:3,19:22:48.15:606,48,0	1/1:10,20:30:60.16:718,60,0	1/1:3,22:24:66.21:833,66,0	1/1:2,8:10:24.08:303,24,0	1/1:2,15:17:39.12:492,39,0	1/1:2,25:26:63.20:795,63,0	1/1:2,15:16:39.12:492,39,0	1/1:3,12:15:36.11:454,36,0	1/1:5,23:28:63.16:795,63,0	1/1:1,22:22:54.17:682,54,0	1/1:3,19:22:57.18:720,57,0	1/1:3,13:16:33.11:417,33,0	1/1:6,19:25:57.18:719,57,0	1/1:1,14:15:33.11:416,33,0	1/1:2,7:9:18.06:227,18,0	1/1:2,14:16:42.13:530,42,0	1/1:1,16:17:45.14:568,45,0	1/1:0,25:25:72.23:909,72,0	1/1:2,12:14:36.11:454,36,0	1/1:5,16:21:48.15:606,48,0	1/1:0,21:21:57.18:719,57,0	1/1:4,11:15:33.11:417,33,0
chr10	6988701	.	C	CT	221.16	PASS	AB=0.867;AC=5;AF=0.089;AN=56;BaseQRankSum=2.523;DP=456;FS=3.223;HRun=0;HaplotypeScore=108.0975;InbreedingCoeff=-0.0550;MQ=72.42;MQ0=0;MQRankSum=-0.620;QD=4.61;ReadPosRankSum=-3.457;VQSLOD=2.8137;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:43.10:0,43,242	0/0:5,0:5:11.28:0,11,54	0/0:23,0:17:23.01:0,23,462	0/0:26,0:17:16.51:0,17,342	0/0:5,0:5:11.11:0,11,55	0/0:13,0:13:9.45:0,9,136	0/0:28,0:28:72.21:0,72,368	0/0:23,0:23:19.01:0,19,137	0/0:20,0:20:48.08:0,48,257	0/0:11,0:11:24.62:0,25,92	0/0:6,0:6:17.22:0,17,91	0/0:24,0:24:16.90:0,17,267	0/0:20,0:20:51.23:0,51,261	0/0:11,0:11:31.83:0,32,197	0/0:26,0:26:68.22:0,68,333	0/0:14,0:14:37.05:0,37,190	0/0:31,0:31:16.73:0,17,326	0/0:23,0:23:19.21:0,19,243	0/1:9,0:9:6.14:6,0,54	0/0:4,0:4:7.46:0,7,32	0/0:29,0:29:70.69:0,71,356	0/1:2,0:2:8.13:20,0,8	0/0:4,0:4:11.62:0,12,68	0/0:36,0:36:91.68:0,92,459	0/0:8,0:8:16.97:0,17,83	0/1:6,2:8:26.34:26,0,42	0/1:12,10:23:39.76:259,0,40	0/1:5,1:6:22.10:22,0,26
chr10	6988702	.	C	CT	645.62	PASS	AB=0.960;AC=14;AF=0.250;AN=56;BaseQRankSum=-5.506;DP=458;FS=4.798;HRun=0;HaplotypeScore=102.9857;InbreedingCoeff=-0.2149;MQ=72.22;MQ0=0;MQRankSum=-1.350;QD=3.10;ReadPosRankSum=-8.569;VQSLOD=-0.1678;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:17,0:17:40.99:41,0,93	0/0:5,0:5:8.99:0,9,35	0/0:22,0:17:26.19:0,26,389	0/0:28,0:17:19.33:0,19,326	0/1:6,0:6:15.89:17,0,16	0/1:12,0:12:15.08:15,0,74	0/0:28,0:28:68.75:0,69,322	0/1:23,0:23:19.80:20,0,89	0/1:20,0:20:24.10:24,0,153	0/1:11,0:11:31.76:60,0,32	0/0:6,0:6:14.88:0,15,70	0/1:24,0:24:33.81:34,0,189	0/1:20,0:20:68.55:69,0,121	0/0:11,0:11:9.49:0,9,115	0/0:26,0:26:65.29:0,65,291	0/0:13,0:13:28.96:0,29,137	0/0:30,0:30:57.43:0,57,325	0/0:24,0:24:61.15:0,61,287	0/1:9,0:9:2.69:3,0,39	0/0:4,0:4:7.98:0,8,33	0/1:29,0:29:38.42:38,0,161	0/0:2,0:2:3.56:0,4,12	0/0:5,0:5:0.46:0,0,30	0/0:36,0:36:66.03:0,66,376	0/0:9,0:9:16.33:0,16,73	0/1:7,2:9:32.18:64,0,32	0/1:13,10:23:23.75:313,0,24	1/1:4,1:5:2.90:97,3,0
chr10	6993343	.	C	CGTGTGTGT	10731.48	PASS	AB=0.854;AC=52;AF=0.963;AN=54;BaseQRankSum=-1.551;DP=736;FS=0.000;HRun=0;HaplotypeScore=229.9283;InbreedingCoeff=0.1578;MQ=60.04;MQ0=10;MQRankSum=-1.018;QD=15.42;ReadPosRankSum=0.872;VQSLOD=3.7145;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:39:11.95:168,12,0	1/1:9,0:9:6.02:190,6,0	1/1:25,0:10:0.47:1,0,0	./.	1/1:33,0:34:9.01:217,9,0	1/1:18,1:23:39.12:810,39,0	0/1:33,1:39:6.79:164,0,7	1/1:21,0:21:12.04:216,12,0	1/1:15,4:24:18.06:611,18,0	1/1:16,6:26:42.08:1078,42,0	1/1:10,5:15:3.01:123,3,0	1/1:20,6:34:11.89:334,12,0	1/1:23,0:23:12.04:341,12,0	1/1:19,2:28:2.78:472,3,0	1/1:22,7:31:12.17:472,12,0	1/1:24,8:34:17.75:669,18,0	1/1:17,9:27:20.87:726,21,0	1/1:16,5:22:18.06:578,18,0	1/1:23,0:22:18.53:516,19,0	0/1:13,2:16:0:0,0,0	1/1:39,0:39:35.78:756,36,0	1/1:11,3:17:3:25,3,0	1/1:13,6:22:8.98:270,9,0	1/1:16,7:28:2.49:24,2,0	1/1:19,1:23:3.01:105,3,0	1/1:23,2:27:33.08:793,33,0	1/1:16,12:30:18.93:577,19,0	1/1:13,2:16:15.05:496,15,0
chr10	6993345	.	T	TGTGTGTGT	10901.39	PASS	AB=1.000;AC=52;AF=0.963;AN=54;BaseQRankSum=-1.570;DP=742;FS=0.000;HRun=0;HaplotypeScore=230.9432;InbreedingCoeff=0.1619;MQ=58.45;MQ0=11;MQRankSum=-1.211;QD=15.55;ReadPosRankSum=0.924;VQSLOD=3.6762;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:41,0:41:11.95:168,12,0	1/1:7,2:12:6.02:190,6,0	1/1:25,0:10:0.47:1,0,0	./.	1/1:34,0:34:9.01:217,9,0	1/1:24,0:24:39.12:810,39,0	0/1:38,0:38:6.79:164,0,7	1/1:23,0:23:13.29:218,13,0	1/1:24,0:24:18.06:611,18,0	1/1:29,0:29:42.08:1078,42,0	1/1:15,0:15:3.01:123,3,0	1/1:35,0:35:11.89:334,12,0	1/1:22,0:22:12.04:341,12,0	1/1:29,0:28:2.78:472,3,0	1/1:31,0:31:12.17:472,12,0	1/1:33,0:33:17.75:669,18,0	1/1:27,0:27:20.87:726,21,0	1/1:22,0:22:21.07:701,21,0	1/1:23,0:22:19:516,19,0	0/1:18,0:18:0:1,0,0	1/1:37,0:37:35.78:756,36,0	1/1:17,0:17:3:25,3,0	1/1:21,0:21:8.98:270,9,0	1/1:27,0:27:2.49:24,2,0	1/1:24,0:24:6.02:148,6,0	1/1:23,0:23:33.08:793,33,0	1/1:30,0:30:18.93:577,19,0	1/1:17,0:17:15.05:496,15,0
chr10	6993590	.	T	TA	15113.39	PASS	AB=1.000;AC=53;AF=0.946;AN=56;BaseQRankSum=-4.655;DP=623;FS=7.607;HRun=9;HaplotypeScore=70.5264;InbreedingCoeff=0.4393;MQ=70.23;MQ0=0;MQRankSum=-5.030;QD=24.82;ReadPosRankSum=3.377;VQSLOD=5.5904;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,41:48:99:1294,117,0	1/1:2,6:8:15.04:166,15,0	0/1:16,0:16:33.53:34,0,133	0/0:14,0:13:2.13:0,2,105	1/1:5,18:23:45.12:498,45,0	1/1:5,22:27:66.18:730,66,0	1/1:4,12:16:33.09:365,33,0	1/1:6,33:39:98.22:1023,98,0	1/1:2,16:18:48.13:531,48,0	1/1:4,22:26:69.18:759,69,0	1/1:1,16:18:47.96:506,48,0	1/1:2,10:12:21.53:233,22,0	1/1:2,21:23:54.15:596,54,0	1/1:5,16:21:48.13:531,48,0	1/1:5,26:31:49.15:765,49,0	1/1:2,16:18:48.13:531,48,0	1/1:5,24:29:63.17:697,63,0	1/1:2,24:26:65.98:725,66,0	1/1:6,17:23:51.12:555,51,0	1/1:2,15:18:45.09:485,45,0	1/1:5,22:27:51.14:564,51,0	1/1:3,11:14:29.96:302,30,0	1/1:3,10:13:24.06:259,24,0	1/1:3,30:33:75.20:830,75,0	1/1:4,20:23:57.15:631,57,0	1/1:5,23:28:43.12:694,43,0	1/1:5,12:18:39.10:428,39,0	1/1:1,11:12:36.05:384,36,0
chr10	6995511	.	GGTGTGTGTGTGTGTGTGTGT	G	1182.72	PASS	AC=12;AF=0.231;AN=52;BaseQRankSum=4.010;DP=475;FS=6.540;HRun=0;HaplotypeScore=204.9246;InbreedingCoeff=0.6568;MQ=78.35;MQ0=19;MQRankSum=-2.719;QD=12.19;ReadPosRankSum=0.714;VQSLOD=1.5374;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:21.07:0,21,816	1/1:8,3:10:8.99:338,9,0	0/0:32,0:17:3.01:0,3,48	0/0:40,0:30:5.88:0,6,53	1/1:9,0:8:3.01:159,3,0	0/0:22,0:21:23.44:0,23,1620	0/0:24,0:30:36.12:0,36,2124	./.	0/0:12,0:14:27.09:0,27,1829	1/1:14,0:13:3.01:40,3,0	./.	0/0:18,0:18:18.06:0,18,867	0/0:3,0:3:6.02:0,6,194	0/0:14,0:14:12.04:0,12,543	1/1:7,7:14:6.02:318,6,0	0/0:13,0:16:12.04:0,12,866	0/0:25,0:30:48.14:0,48,2922	1/1:15,2:17:9.03:377,9,0	0/0:18,0:18:14:0,14,622	0/0:5,0:5:6.02:0,6,482	1/1:30,1:26:8.81:98,9,0	0/0:9,0:8:6.02:0,6,238	0/0:9,0:9:6.02:0,6,238	0/0:18,0:20:42.10:0,42,2355	0/0:16,0:16:6.02:0,6,487	0/0:22,0:22:29.13:0,29,1441	0/0:9,0:9:9.03:0,9,468	0/0:6,0:4:3.90:0,4,95
chr10	6996956	.	C	CGTGTGTGTGTGT	5165.27	PASS	AB=0.771;AC=46;AF=0.821;AN=56;BaseQRankSum=3.599;DP=602;FS=17.851;HRun=0;HaplotypeScore=195.0403;InbreedingCoeff=0.5545;MQ=59.15;MQ0=12;MQRankSum=-2.204;QD=10.90;ReadPosRankSum=-3.540;VQSLOD=1.7792;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:23.17:0,23,363	1/1:0,4:11:2.89:133,3,0	0/0:41,0:21:38.98:0,39,537	0/0:39,0:20:32.09:0,32,513	1/1:14,0:14:8.98:74,9,0	1/1:24,0:24:26.85:344,27,0	1/1:19,0:18:24.49:178,24,0	1/1:22,0:21:30.04:211,30,0	1/1:18,0:17:16.11:144,16,0	1/1:26,0:25:51.26:667,51,0	1/1:13,0:12:9.37:110,9,0	1/1:31,0:31:17.45:296,17,0	0/1:3,0:19:64.59:111,0,65	1/1:16,0:16:12.73:139,13,0	1/1:4,8:20:0.47:1,0,0	1/1:4,0:26:5.64:102,6,0	1/1:23,0:21:37.71:476,38,0	0/1:18,0:18:0.65:295,0,1	1/1:12,0:12:22.52:218,23,0	1/1:17,0:17:17.13:149,17,0	1/1:42,0:42:44.82:346,45,0	1/1:3,0:14:0.47:1,0,0	0/0:3,0:13:0.08:0,0,0	1/1:6,0:23:0.47:1,0,0	1/1:5,0:17:2.60:25,3,0	1/1:24,0:22:40.62:690,41,0	1/1:13,0:12:23.92:287,24,0	1/1:1,4:8:3.01:169,3,0
chr10	6997662	.	T	TG	15795.91	PASS	AB=0.737;AC=54;AF=0.964;AN=56;BaseQRankSum=-1.158;DP=688;FS=4.137;HRun=2;HaplotypeScore=217.5782;InbreedingCoeff=-0.0378;MQ=62.38;MQ0=0;MQRankSum=-2.969;QD=22.96;ReadPosRankSum=1.756;VQSLOD=4.5880;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:27,24:51:99:1103,118,0	1/1:3,6:9:20.62:144,21,0	0/1:9,9:17:43.75:239,0,44	0/1:19,6:22:99:152,0,102	1/1:10,14:24:64.67:564,65,0	1/1:6,17:23:67.67:492,68,0	1/1:13,15:28:74.08:682,74,0	1/1:18,13:31:80.97:874,81,0	1/1:5,13:18:53.23:422,53,0	1/1:12,8:20:53.51:575,54,0	1/1:7,9:16:40.62:317,41,0	1/1:15,16:31:88.58:768,89,0	1/1:17,12:29:78.62:820,79,0	1/1:15,18:33:95.27:820,95,0	1/1:10,18:28:81.49:740,81,0	1/1:15,19:34:94.67:818,95,0	1/1:17,12:29:79.91:757,80,0	1/1:16,13:28:74.75:713,75,0	1/1:10,10:19:37.01:507,37,0	1/1:3,8:11:25.90:208,26,0	1/1:23,13:36:91.80:830,92,0	1/1:6,13:19:49.48:344,49,0	1/1:11,8:19:47.53:439,48,0	1/1:7,16:23:46.35:323,46,0	1/1:12,9:21:62.52:604,63,0	1/1:12,13:25:68.64:663,69,0	1/1:11,21:32:94.61:734,95,0	1/1:3,2:5:14.98:142,15,0
chr10	6997710	.	T	TA	1873.87	PASS	AB=0.990;AC=39;AF=0.696;AN=56;BaseQRankSum=-7.671;DP=566;FS=6.864;HRun=2;HaplotypeScore=214.3354;InbreedingCoeff=-0.1001;MQ=66.90;MQ0=1;MQRankSum=11.219;QD=3.48;ReadPosRankSum=4.114;VQSLOD=0.3494;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:36,0:35:3.82:100,0,4	0/1:9,0:9:0.37:21,0,0	0/0:12,0:12:26.51:0,27,255	0/0:16,0:16:39.92:0,40,346	0/1:20,0:20:22.60:66,0,23	0/1:18,0:18:13.69:14,0,14	1/1:23,0:23:3.71:104,4,0	1/1:29,1:27:32.86:227,33,0	1/1:18,0:18:3.66:55,4,0	1/1:16,0:16:26.70:145,27,0	0/1:12,0:12:3.42:12,0,3	0/1:24,0:24:6.12:82,0,6	0/1:26,0:26:15.87:72,0,16	0/1:24,0:24:15:73,0,15	1/1:32,0:32:10.32:151,10,0	1/1:27,0:27:5.95:72,6,0	0/1:19,0:19:8.13:24,0,8	1/1:24,0:23:9.84:64,10,0	1/1:15,0:15:26.20:145,26,0	1/1:17,0:16:1.58:53,2,0	1/1:34,1:35:12.23:189,12,0	1/1:15,0:15:2.96:42,3,0	0/1:17,0:17:15.51:40,0,16	0/1:23,0:23:27.94:35,0,28	0/1:12,1:13:2.19:58,0,2	1/1:24,0:24:18.47:104,18,0	0/1:17,1:18:16.41:40,0,16	1/1:3,0:3:2.40:38,2,0
chr10	6998878	.	CGT	C	6169.31	PASS	AB=0.700;AC=43;AF=0.768;AN=56;BaseQRankSum=-1.047;DP=618;FS=30.967;HRun=0;HaplotypeScore=90.5377;InbreedingCoeff=0.6915;MQ=61.21;MQ0=7;MQRankSum=5.708;QD=12.59;ReadPosRankSum=1.484;VQSLOD=2.9437;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:32:2.97:0,3,20	1/1:8,0:8:3.01:32,3,0	0/0:23,0:14:3.01:0,3,46	0/0:24,0:17:8.05:0,8,78	1/1:5,14:19:33.05:374,33,0	1/1:13,9:21:23.93:254,24,0	1/1:18,20:38:36.63:520,37,0	1/1:18,2:20:2.96:34,3,0	1/1:14,7:21:20.89:218,21,0	1/1:13,8:22:26.88:286,27,0	1/1:5,7:12:9:102,9,0	1/1:9,9:21:26.51:245,27,0	1/1:4,7:10:15.04:170,15,0	1/1:11,3:15:8.85:82,9,0	1/1:10,9:22:35.60:348,36,0	1/1:11,7:19:29.58:280,30,0	1/1:12,18:32:59.66:621,60,0	1/1:17,17:34:28.45:583,28,0	1/1:14,6:20:14.16:168,14,0	1/1:8,10:19:29.88:320,30,0	1/1:25,27:53:59.65:611,60,0	1/1:10,7:17:14.87:150,15,0	1/1:15,11:27:26.74:286,27,0	1/1:8,13:22:32.78:340,33,0	0/1:8,5:14:23.91:143,0,24	0/0:25,0:24:27.96:0,28,189	0/0:21,0:20:12.73:0,13,85	0/0:2,0:2:5.97:0,6,61
chr10	6999429	.	T	TAG	2779.26	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-6.555;DP=684;FS=5.006;HRun=0;HaplotypeScore=81.4535;InbreedingCoeff=0.9967;MQ=74.56;MQ0=0;MQRankSum=-1.397;QD=45.56;ReadPosRankSum=1.151;VQSLOD=4.7029;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,114,1718	0/0:9,0:9:27.09:0,27,414	0/0:15,0:15:39.09:0,39,530	0/0:20,0:20:37.72:0,38,681	0/0:18,0:18:48.16:0,48,734	0/0:29,0:29:87.30:0,87,1331	0/0:26,0:26:75.24:0,75,1124	0/0:49,0:48:99:0,141,2101	0/0:19,0:19:57.19:0,57,873	0/0:25,0:25:72.24:0,72,1103	0/0:17,0:17:45.15:0,45,689	0/0:18,0:18:51.17:0,51,780	0/0:23,0:23:69.22:0,69,1034	0/0:40,0:40:99:0,117,1729	0/0:34,0:34:99:0,102,1560	0/0:27,0:27:81.28:0,81,1241	0/0:20,0:20:57.18:0,57,848	0/0:22,0:22:66.22:0,66,1004	0/0:25,0:25:72.22:0,72,1079	0/0:27,0:27:81.27:0,81,1233	0/0:29,0:29:84.29:0,84,1287	0/0:26,0:26:78.26:0,78,1182	0/0:17,0:17:48.16:0,48,734	0/0:27,0:27:69.21:0,69,1032	0/0:22,0:22:66.22:0,66,1011	1/1:0,20:20:60.21:1149,60,0	1/1:4,28:33:78.26:1424,78,0	1/1:0,7:8:18.06:348,18,0
chr10	7001121	.	CT	C	1109.44	PASS	AB=0.826;AC=17;AF=0.304;AN=56;BaseQRankSum=-1.261;DP=647;FS=3.278;HRun=15;HaplotypeScore=83.6867;InbreedingCoeff=0.3876;MQ=67.68;MQ0=17;MQRankSum=2.595;QD=3.99;ReadPosRankSum=4.339;VQSLOD=1.2390;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:39:37.95:119,38,0	0/1:12,1:13:0.97:1,0,96	0/0:20,0:16:16.51:0,17,106	0/1:7,0:7:1.90:2,0,6	0/0:29,1:27:29.99:0,30,251	1/1:16,5:20:17.38:126,17,0	1/1:9,16:24:10.01:186,10,0	0/0:33,0:34:41.45:0,41,310	0/1:21,1:22:24.06:74,0,24	0/0:27,0:26:4.16:0,4,223	0/0:9,0:9:1.66:0,2,42	0/0:20,0:24:19.47:0,19,166	0/0:22,0:22:29.52:0,30,240	0/0:17,0:17:28.34:0,28,213	0/0:26,1:27:11.67:0,12,299	0/1:11,17:30:7.25:164,0,7	0/1:15,20:34:8.16:205,0,8	0/0:35,0:34:47.50:0,48,484	1/1:14,12:22:20.14:213,20,0	1/1:6,10:18:1.47:99,1,0	0/0:16,1:16:8.20:0,8,193	0/0:14,0:12:15.66:0,16,98	0/0:16,0:17:29.77:0,30,239	0/1:25,1:27:19.87:20,0,179	0/1:7,6:12:49.10:72,0,49	0/0:30,0:31:54.17:0,54,295	0/0:26,0:26:31.72:0,32,188	0/0:16,0:15:17.32:0,17,96
chr10	7001136	.	T	TTC	919.04	PASS	AB=0.764;AC=6;AF=0.107;AN=56;BaseQRankSum=-2.263;DP=632;FS=2.831;HRun=0;HaplotypeScore=86.1607;InbreedingCoeff=0.6482;MQ=53.23;MQ0=31;MQRankSum=0.780;QD=11.63;ReadPosRankSum=-2.424;VQSLOD=3.1524;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:42:71.54:0,72,538	0/0:8,0:8:14.45:0,14,154	0/1:9,0:5:2.94:3,0,109	0/0:2,0:2:2.93:0,3,18	0/0:26,0:22:55.98:0,56,503	0/0:19,0:20:21.54:0,22,250	0/0:32,0:33:70.89:0,71,511	0/0:29,0:28:68.75:0,69,587	0/0:12,0:26:37.59:0,38,272	0/0:25,0:24:53.17:0,53,475	0/0:6,0:6:14.08:0,14,103	0/0:23,0:22:41.33:0,41,349	0/0:19,0:17:37.67:0,38,307	0/0:19,0:19:11.18:0,11,245	0/0:29,0:28:23.75:0,24,444	0/0:24,0:26:56.49:0,56,426	0/0:37,0:37:80.18:0,80,643	0/0:37,0:36:89.46:0,89,833	0/0:26,0:21:51.32:0,51,364	0/0:20,0:20:47.33:0,47,343	0/0:20,0:17:44.11:0,44,417	0/0:11,0:9:16.83:0,17,135	0/0:18,0:16:32.94:0,33,332	0/0:24,0:25:50.86:0,51,432	0/0:18,0:12:26.80:0,27,228	1/1:6,22:33:14.27:558,14,0	0/1:3,20:28:4.08:340,0,4	1/1:4,0:4:11.99:141,12,0
chr10	7003536	.	AC	A	7511.68	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=15.713;DP=923;FS=0.000;HRun=1;HaplotypeScore=84.9155;InbreedingCoeff=0.9998;MQ=93.41;MQ0=0;MQRankSum=-7.885;QD=39.74;ReadPosRankSum=3.314;VQSLOD=5.3137;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,159,2488	0/0:10,0:10:30.09:0,30,457	0/0:42,0:41:99:0,120,1875	0/0:38,0:38:99:0,111,1746	0/0:29,0:29:87.28:0,87,1364	0/0:24,0:24:72.25:0,72,1148	0/0:31,0:31:93.29:0,93,1436	0/0:40,0:40:99:0,117,1829	0/0:34,0:34:99:0,102,1628	0/0:44,0:44:99:0,132,2082	0/0:21,0:21:63.20:0,63,984	1/1:0,42:42:99:1679,120,0	1/1:0,38:38:99:1511,108,0	1/1:0,34:34:96.32:1343,96,0	0/0:53,0:53:99:0,160,2519	0/0:44,0:44:99:0,132,2079	0/0:30,0:30:90.27:0,90,1387	0/0:29,1:30:48.39:0,48,1335	0/0:17,0:17:51.16:0,51,790	0/0:36,0:36:99:0,108,1726	0/0:54,0:54:99:0,162,2516	1/1:0,23:23:66.22:923,66,0	1/1:0,14:14:42.14:587,42,0	1/1:0,38:38:99:1469,105,0	0/0:21,0:21:63.21:0,63,1007	0/0:39,0:39:99:0,117,1805	0/0:32,0:32:96.31:0,96,1505	0/0:10,0:10:30.10:0,30,479
chr10	7004659	.	A	AGT	14160.44	PASS	AB=0.609;AC=36;AF=0.643;AN=56;BaseQRankSum=-12.770;DP=941;FS=6.439;HRun=0;HaplotypeScore=105.5372;InbreedingCoeff=0.3935;MQ=62.50;MQ0=23;MQRankSum=1.710;QD=20.85;ReadPosRankSum=4.525;VQSLOD=4.8990;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:46:99:0,104,1123	1/1:2,7:9:9.78:238,10,0	0/0:64,0:17:17.58:0,18,156	0/0:74,0:30:26.18:0,26,263	1/1:4,17:21:27.09:428,27,0	0/1:8,19:28:11.36:484,0,11	0/1:14,20:35:88.86:412,0,89	1/1:22,14:36:23.56:689,24,0	0/1:9,27:37:4.74:881,0,5	1/1:14,22:36:71.91:1013,72,0	0/1:6,9:15:51.80:172,0,52	1/1:7,24:33:24.70:865,25,0	1/1:7,27:34:15.63:725,16,0	1/1:8,26:35:24.78:868,25,0	0/1:13,31:43:0.10:760,0,0	0/1:20,17:37:32.57:899,0,33	1/1:13,27:40:9.61:630,10,0	0/1:5,14:19:0.75:529,0,1	1/1:13,14:26:41.45:546,41,0	1/1:6,17:23:26.11:514,26,0	1/1:18,36:54:53.09:1083,53,0	1/1:8,18:27:39.59:584,40,0	0/1:9,14:23:25.69:395,0,26	1/1:13,32:45:3.73:957,4,0	1/1:5,15:20:0.58:487,1,0	0/0:35,0:35:34.26:0,34,798	0/0:25,0:25:69.17:0,69,791	0/0:17,0:17:39.12:0,39,461
chr10	7005752	.	G	GA	7390.69	PASS	AB=0.654;AC=41;AF=0.732;AN=56;BaseQRankSum=-8.204;DP=582;FS=0.939;HRun=12;HaplotypeScore=67.4631;InbreedingCoeff=0.5510;MQ=63.78;MQ0=0;MQRankSum=-1.071;QD=14.52;ReadPosRankSum=1.247;VQSLOD=5.5636;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:36,8:44:39.23:39,0,402	1/1:1,5:6:15.02:146,15,0	0/0:19,0:18:24.79:0,25,143	0/0:8,0:7:10.96:0,11,71	0/1:13,9:23:4.93:262,0,5	1/1:7,17:25:7.23:383,7,0	1/1:2,16:18:39.06:380,39,0	1/1:12,23:37:36.88:534,37,0	0/1:4,10:14:6.85:102,0,7	1/1:4,13:17:23.95:228,24,0	1/1:8,6:15:28.11:242,28,0	1/1:3,27:30:29.17:446,29,0	0/1:3,10:14:10.04:61,0,10	1/1:12,14:26:14.87:286,15,0	1/1:3,15:18:17.18:328,17,0	1/1:6,18:25:32.15:448,32,0	1/1:5,35:41:74.08:868,74,0	1/1:7,16:25:44.67:390,45,0	1/1:3,13:18:25.78:367,26,0	1/1:8,16:24:43.19:384,43,0	1/1:3,15:18:42.54:410,43,0	1/1:1,9:10:24.46:225,24,0	1/1:5,8:20:18.74:278,19,0	1/1:6,14:20:17.15:329,17,0	0/1:5,14:21:8.81:256,0,9	0/0:20,0:20:37.82:0,38,279	0/0:17,1:19:20.59:0,21,305	0/0:4,0:5:10.99:0,11,72
chr10	7008113	.	AGAC	A	44.74	PASS	AB=0.841;AC=3;AF=0.054;AN=56;BaseQRankSum=5.174;DP=851;FS=2.490;HRun=0;HaplotypeScore=166.0713;InbreedingCoeff=-0.0580;MQ=74.85;MQ0=0;MQRankSum=-2.434;QD=0.59;ReadPosRankSum=-3.587;VQSLOD=1.9057;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:44,8:52:10.67:0,11,2271	0/0:15,0:15:42.14:0,42,922	0/0:23,0:23:66.20:0,66,1240	0/0:23,0:23:52.66:0,53,1228	0/0:13,0:13:33.11:0,33,678	0/0:15,0:15:42.10:0,42,903	0/0:50,0:50:99:0,148,3191	0/0:22,0:22:60.16:0,60,1242	0/0:24,0:24:66.23:0,66,1451	0/0:32,0:32:93.32:0,93,2107	0/0:15,0:15:42.14:0,42,923	0/0:41,0:41:99:0,114,2515	0/0:48,0:48:99:0,138,3097	0/0:39,0:39:99:0,108,2407	0/0:39,0:39:99:0,105,2371	0/0:40,0:40:99:0,117,2594	0/0:37,0:37:99:0,111,2436	0/0:22,0:22:60.21:0,60,1278	0/0:28,0:28:69.24:0,69,1494	0/0:22,0:22:63.22:0,63,1378	0/0:58,0:58:99:0,172,3741	0/0:26,0:26:78.25:0,78,1716	0/0:21,0:21:54.16:0,54,1102	0/0:45,0:44:99:0,129,2783	0/0:25,0:25:69.24:0,69,1562	0/1:18,3:21:80.38:80,0,1069	0/1:37,4:41:44.08:44,0,2014	0/1:9,5:14:19.83:20,0,581
chr10	7008401	.	G	GC	2770.01	PASS	AB=0.530;AC=5;AF=0.089;AN=56;BaseQRankSum=-6.217;DP=773;FS=0.960;HRun=1;HaplotypeScore=73.9405;InbreedingCoeff=0.7821;MQ=88.30;MQ0=1;MQRankSum=-0.320;QD=32.98;ReadPosRankSum=-0.925;VQSLOD=3.1286;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,129,1673	0/0:17,0:17:51.17:0,51,660	0/0:24,0:23:66.20:0,66,829	0/0:32,0:32:36.76:0,37,780	0/0:23,0:23:69.22:0,69,896	0/0:26,0:26:75.24:0,75,974	0/0:33,0:33:93.30:0,93,1207	0/0:44,0:44:99:0,120,1484	0/0:23,0:23:66.21:0,66,856	0/0:35,0:35:99:0,102,1324	0/0:22,0:22:60.18:0,60,766	0/0:27,0:27:75.23:0,75,960	0/0:29,0:29:87.27:0,87,1115	0/0:21,0:21:57.18:0,57,740	0/0:28,0:28:84.26:0,84,1075	0/0:31,0:31:87.28:0,87,1130	0/0:34,0:34:99:0,102,1324	0/0:26,0:26:78.23:0,78,992	0/0:8,0:8:24.07:0,24,299	0/0:27,0:27:75.24:0,75,974	0/0:30,0:30:90.28:0,90,1154	0/0:33,0:33:99:0,99,1270	0/0:26,0:26:78.25:0,78,1013	0/0:22,0:22:66.21:0,66,857	0/0:23,0:23:60.19:0,60,779	0/1:4,31:35:17.57:1237,0,18	1/1:3,33:36:90.17:1347,90,0	1/1:0,13:12:21.07:315,21,0
chr10	7008859	.	C	CTCAT	20551.85	PASS	AB=0.614;AC=42;AF=0.750;AN=56;BaseQRankSum=-10.462;DP=768;FS=14.966;HRun=0;HaplotypeScore=101.6014;InbreedingCoeff=0.5127;MQ=65.40;MQ0=7;MQRankSum=1.428;QD=32.21;ReadPosRankSum=0.831;VQSLOD=4.1354;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:14,1:23:21.05:283,21,0	1/1:2,5:7:8.95:161,9,0	0/0:30,0:22:6.02:0,6,94	0/0:26,0:15:0.47:0,0,1	1/1:11,21:34:21.17:1333,21,0	1/1:11,13:24:30.10:719,30,0	0/1:12,12:24:20.81:548,0,21	1/1:22,6:28:21.03:291,21,0	0/1:7,13:21:14.79:685,0,15	1/1:12,20:32:60.19:1333,60,0	1/1:8,14:21:39.05:880,39,0	1/1:7,22:29:48.16:1151,48,0	1/1:12,15:28:35.84:860,36,0	0/1:5,12:18:17.80:617,0,18	1/1:6,34:40:54.19:1295,54,0	1/1:15,24:43:60.21:1438,60,0	1/1:11,21:32:51.18:1222,51,0	0/1:6,11:17:62.69:604,0,63	1/1:15,10:25:33.07:639,33,0	1/1:15,22:37:57.12:1263,57,0	1/1:14,21:35:45.15:1049,45,0	1/1:9,26:35:69.06:1494,69,0	1/1:11,19:30:42.14:1007,42,0	1/1:7,23:30:3.28:1102,3,0	1/1:7,12:20:24.08:576,24,0	0/0:28,0:28:63.21:0,63,1004	0/0:29,0:29:75.23:0,75,1160	0/0:14,0:15:42.14:0,42,648
chr10	7010507	.	G	GTA	25055.19	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-14.992;DP=672;FS=1.115;HRun=0;HaplotypeScore=68.4616;InbreedingCoeff=0.9817;MQ=88.59;MQ0=3;MQRankSum=-5.087;QD=48.46;ReadPosRankSum=2.056;VQSLOD=5.7755;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,114,1655	1/1:0,11:11:33.11:617,33,0	0/0:28,0:28:78.10:0,78,1033	0/0:30,0:30:69.05:0,69,922	1/1:1,16:17:45.15:843,45,0	1/1:0,23:25:69.24:1292,69,0	1/1:1,25:26:69.24:1292,69,0	1/1:3,28:31:87.30:1630,87,0	1/1:1,21:22:60.21:1121,60,0	1/1:2,25:28:81.26:1478,81,0	1/1:0,18:18:54.19:1011,54,0	1/1:2,23:24:60.21:1124,60,0	1/1:1,22:23:66.23:1236,66,0	1/1:0,14:14:39.13:731,39,0	1/1:3,31:34:84.29:1574,84,0	1/1:2,29:29:69.24:1292,69,0	1/1:3,32:36:87.30:1628,87,0	1/1:1,20:20:54.19:1011,54,0	1/1:3,21:26:69.17:1178,69,0	1/1:0,19:19:52.06:957,52,0	1/1:3,34:37:96.33:1798,96,0	1/1:4,14:19:42.14:774,42,0	1/1:3,10:13:27.09:506,27,0	1/1:2,14:16:36.12:674,36,0	1/1:1,22:25:69.24:1287,69,0	0/0:20,1:21:7:0,7,827	0/0:28,0:28:81.27:0,81,1193	0/0:9,0:9:27.09:0,27,390
chr10	7013025	.	GC	G	21776.20	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=9.509;DP=794;FS=8.596;HRun=3;HaplotypeScore=80.6461;InbreedingCoeff=0.9996;MQ=71.88;MQ0=1;MQRankSum=-5.383;QD=34.51;ReadPosRankSum=3.646;VQSLOD=5.2569;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,126,1812	1/1:0,14:14:39.12:483,39,0	0/0:27,0:25:66.20:0,66,909	0/0:34,0:33:93.31:0,93,1292	1/1:1,17:18:48.15:595,48,0	1/1:0,25:25:69.22:855,69,0	1/1:1,21:22:63.19:773,63,0	1/1:2,37:39:99:1299,108,0	1/1:0,27:27:69.22:855,69,0	1/1:0,21:21:63.15:751,63,0	1/1:0,18:18:51.16:632,51,0	1/1:2,46:48:99:1673,135,0	1/1:2,22:24:63.20:781,63,0	1/1:1,37:38:99:1375,111,0	1/1:1,46:47:99:1710,138,0	1/1:0,30:30:90.28:1116,90,0	1/1:0,19:19:51.16:632,51,0	1/1:1,24:25:60.19:744,60,0	1/1:0,18:18:54.17:667,54,0	1/1:1,27:28:78.25:967,78,0	1/1:1,32:32:81.25:1004,81,0	1/1:1,24:25:75.23:923,75,0	1/1:0,22:22:63.20:781,63,0	1/1:1,56:57:99:2045,166,0	1/1:1,32:33:90.28:1116,90,0	0/0:22,0:22:63.16:0,63,849	0/0:29,0:29:84.27:0,84,1190	0/0:8,0:8:24.08:0,24,346
chr10	7021526	.	TGTGTGTGTGTGTGTG	T	6312.18	PASS	AB=1.000;AC=46;AF=0.821;AN=56;BaseQRankSum=8.686;DP=650;FS=14.738;HRun=0;HaplotypeScore=211.0371;InbreedingCoeff=0.4941;MQ=54.34;MQ0=35;MQRankSum=-7.057;QD=13.60;ReadPosRankSum=4.219;VQSLOD=2.3812;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,102,5537	1/1:5,0:5:6.01:58,6,0	0/0:62,0:22:15.01:0,15,294	0/0:54,0:14:18.05:0,18,442	1/1:17,0:17:6.01:58,6,0	1/1:20,0:20:15.03:183,15,0	1/1:19,0:18:15.01:176,15,0	1/1:26,0:25:10.53:297,11,0	1/1:27,0:26:54.09:517,54,0	1/1:16,0:13:3.63:79,4,0	1/1:18,0:18:9.01:86,9,0	1/1:24,0:24:33.05:316,33,0	1/1:22,0:21:21.03:201,21,0	1/1:14,0:14:15.03:152,15,0	1/1:27,1:25:36.06:444,36,0	1/1:23,0:23:27.05:298,27,0	1/1:18,0:15:3:29,3,0	0/1:13,0:11:29:113,0,29	0/1:28,0:26:34.17:264,0,34	1/1:15,0:15:15.02:144,15,0	0/0:22,0:17:3:0,3,27	1/1:23,0:22:12:147,12,0	1/1:16,0:16:8.58:86,9,0	1/1:19,0:16:3:29,3,0	1/1:20,0:18:21.01:233,21,0	1/1:8,27:34:51.17:1542,51,0	1/1:7,6:13:12.04:489,12,0	1/1:1,4:5:0.80:372,1,0
chr10	7021528	.	TGTGTGTGTGTGTG	T	9088.84	PASS	AB=0.964;AC=48;AF=0.857;AN=56;BaseQRankSum=8.786;DP=648;FS=21.824;HRun=0;HaplotypeScore=183.5517;InbreedingCoeff=0.5604;MQ=52.29;MQ0=38;MQRankSum=-6.351;QD=18.82;ReadPosRankSum=3.722;VQSLOD=2.4587;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:46:99:0,102,4798	1/1:5,0:5:6.02:110,6,0	0/0:65,0:22:15:0,15,268	0/0:52,0:13:18.05:0,18,365	1/1:17,1:17:6.02:110,6,0	1/1:19,1:20:15.05:334,15,0	1/1:18,1:18:15.05:308,15,0	1/1:27,1:27:40.50:583,41,0	1/1:27,0:26:54.19:988,54,0	1/1:16,0:13:15.44:220,15,0	1/1:17,0:17:9.03:165,9,0	1/1:24,0:24:33.11:604,33,0	1/1:23,0:22:21.07:384,21,0	1/1:14,0:14:15.05:257,15,0	1/1:27,0:24:36.12:697,36,0	1/1:22,1:23:27.09:553,27,0	1/1:19,0:15:3.01:55,3,0	0/1:12,1:11:13.64:212,0,14	1/1:27,0:25:33.69:495,34,0	1/1:15,0:15:15.05:274,15,0	1/1:20,0:15:2.84:14,3,0	1/1:22,1:22:12.03:252,12,0	1/1:15,0:15:8.86:165,9,0	1/1:18,0:15:3.01:55,3,0	1/1:19,1:18:21.07:418,21,0	1/1:35,0:34:51.17:1197,51,0	1/1:12,0:12:12.04:372,12,0	0/1:5,0:5:0.34:268,0,0
chr10	7021530	.	TGTGTGTGTGTG	T	13805.87	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=7.573;DP=647;FS=15.648;HRun=0;HaplotypeScore=149.4884;InbreedingCoeff=0.6622;MQ=50.08;MQ0=44;MQRankSum=-5.739;QD=28.82;ReadPosRankSum=4.059;VQSLOD=2.7823;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:46:99:0,103,4094	1/1:2,3:5:6.02:202,6,0	0/0:64,0:19:15:0,15,247	0/0:57,0:15:24.07:0,24,392	1/1:5,14:18:6.02:202,6,0	1/1:4,15:19:15.05:484,15,0	1/1:6,10:15:15.05:458,15,0	1/1:7,23:29:60.17:867,60,0	1/1:2,25:26:54.19:1817,54,0	1/1:5,11:13:15.52:405,16,0	1/1:1,17:17:9.03:303,9,0	1/1:3,21:24:33.11:1110,33,0	1/1:2,21:22:21.07:707,21,0	1/1:3,10:13:15.05:441,15,0	1/1:4,23:24:36.12:1190,36,0	1/1:3,21:23:27.09:888,27,0	1/1:7,10:13:3.01:101,3,0	1/1:5,8:11:12:302,12,0	1/1:9,19:26:45.14:766,45,0	1/1:4,10:14:15.05:505,15,0	1/1:18,0:13:3.01:38,3,0	1/1:4,18:21:12.04:356,12,0	1/1:1,14:15:8.73:302,9,0	1/1:7,10:14:3.01:101,3,0	1/1:8,14:18:21.07:660,21,0	1/1:35,0:33:51.17:1058,51,0	1/1:12,0:12:12.04:316,12,0	1/1:5,0:5:2:228,2,0
chr10	7021540	.	TG	T	3032.41	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=9.957;DP=642;FS=8.058;HRun=2;HaplotypeScore=120.4760;InbreedingCoeff=0.7042;MQ=42.87;MQ0=75;MQRankSum=-5.806;QD=6.56;ReadPosRankSum=5.580;VQSLOD=0.6098;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:47,1:47:71.44:0,71,1408	1/1:4,0:3:5.48:25,5,0	0/0:67,1:17:24.02:0,24,276	0/0:64,0:19:44.59:0,45,423	1/1:16,3:17:5.36:22,5,0	1/1:18,0:16:13.31:55,13,0	1/1:12,1:11:13.64:82,14,0	1/1:25,1:25:59.43:683,59,0	1/1:26,1:26:48.21:201,48,0	1/1:13,1:11:14.05:110,14,0	1/1:18,1:17:8.03:34,8,0	1/1:22,0:21:29.46:123,29,0	1/1:22,1:21:18.75:78,19,0	1/1:12,0:11:13.72:82,14,0	1/1:27,1:24:32.21:135,32,0	1/1:23,1:22:24.11:100,24,0	1/1:15,3:13:2.68:11,3,0	1/1:11,6:12:16.98:147,17,0	1/1:24,0:21:44.14:476,44,0	1/1:12,0:10:13.39:56,13,0	1/1:1,21:12:6.02:77,6,0	1/1:24,0:20:10.96:71,11,0	1/1:16,1:14:8.04:34,8,0	1/1:15,3:12:2.68:11,3,0	1/1:15,4:15:19:104,19,0	1/1:30,0:27:46.02:360,46,0	1/1:7,0:7:10.16:39,10,0	1/1:5,0:5:10.70:67,11,0
chr10	7021541	.	GGT	G	1375.80	PASS	AB=1.000;AC=43;AF=0.796;AN=54;BaseQRankSum=9.148;DP=645;FS=5.890;HRun=0;HaplotypeScore=132.3824;InbreedingCoeff=0.2326;MQ=44.05;MQ0=75;MQRankSum=-7.623;QD=3.12;ReadPosRankSum=7.763;VQSLOD=1.3430;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:44,4:47:3.71:0,4,970	1/1:3,0:3:5.60:26,6,0	0/0:65,0:15:17.92:0,18,207	0/0:65,1:21:10.96:0,11,272	1/1:18,0:16:5.60:26,6,0	0/1:17,0:17:20.01:49,0,20	1/1:12,0:11:11.19:53,11,0	0/1:26,0:25:12.37:12,0,48	1/1:26,0:26:50.36:236,50,0	1/1:12,0:11:8.86:40,9,0	1/1:18,0:17:8.39:39,8,0	1/1:21,0:21:30.78:144,31,0	1/1:22,0:21:19.59:92,20,0	1/1:11,0:11:11.19:53,11,0	1/1:25,0:24:33.57:158,34,0	1/1:23,0:22:25.18:118,25,0	1/1:14,0:11:2.80:13,3,0	0/1:16,0:13:25.37:27,0,25	1/1:22,0:21:0.52:29,1,0	0/1:11,0:11:7.79:49,0,8	./.	1/1:20,0:19:8.39:40,8,0	1/1:16,0:15:8.35:39,8,0	1/1:13,0:11:2.80:13,3,0	1/1:19,0:15:16.79:79,17,0	0/1:29,0:27:6.03:103,0,6	1/1:9,0:9:11.19:54,11,0	1/1:4,0:5:3.34:33,3,0
chr10	7021670	.	TG	T	8945.18	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=1.784;DP=575;FS=32.907;HRun=10;HaplotypeScore=69.9582;InbreedingCoeff=0.9419;MQ=75.87;MQ0=0;MQRankSum=-1.221;QD=19.70;ReadPosRankSum=4.814;VQSLOD=3.5585;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:66.12:0,66,707	1/1:0,10:10:26.99:234,27,0	0/0:19,0:19:38.11:0,38,381	0/0:15,0:15:17.01:0,17,170	1/1:4,21:25:65.80:554,66,0	1/1:4,21:25:59.95:515,60,0	1/1:6,17:23:56.98:495,57,0	1/1:4,10:14:26.95:227,27,0	1/1:3,10:13:32.99:286,33,0	1/1:7,17:24:44.97:387,45,0	1/1:5,11:16:29.98:260,30,0	1/1:5,13:18:44.99:390,45,0	1/1:4,19:23:50.99:441,51,0	1/1:4,12:17:44.02:370,44,0	1/1:4,25:29:74.98:649,75,0	1/1:2,18:20:11.74:330,12,0	1/1:6,13:19:26.29:363,26,0	1/1:5,11:16:38.98:338,39,0	1/1:2,15:17:44.99:390,45,0	1/1:7,19:27:61.99:521,62,0	1/1:5,23:28:65.98:573,66,0	1/1:3,12:15:38.91:325,39,0	1/1:11,18:29:50.97:442,51,0	1/1:6,11:21:44.12:332,44,0	1/1:6,19:25:59.98:521,60,0	0/0:23,0:23:43.92:0,44,460	0/0:21,0:21:57.13:0,57,619	0/0:12,1:13:0.98:0,1,219
chr10	7022615	.	CT	C	4146.24	PASS	AB=0.675;AC=40;AF=0.714;AN=56;BaseQRankSum=1.162;DP=432;FS=5.490;HRun=13;HaplotypeScore=63.3154;InbreedingCoeff=0.4568;MQ=69.18;MQ0=2;MQRankSum=-0.187;QD=12.09;ReadPosRankSum=2.336;VQSLOD=3.7289;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:38:78.20:0,78,458	1/1:4,5:9:14.03:108,14,0	0/0:6,0:5:5.15:0,5,77	0/1:15,0:13:17.12:17,0,22	1/1:2,11:14:7.62:179,8,0	1/1:3,7:11:23.79:161,24,0	1/1:4,8:13:22.90:158,23,0	1/1:6,8:15:23.74:159,24,0	1/1:4,12:15:23.84:175,24,0	0/1:6,13:20:63.95:238,0,64	1/1:1,7:8:17.88:131,18,0	0/1:6,9:17:0.34:152,0,0	1/1:6,10:16:4.27:168,4,0	1/1:1,8:11:24.01:149,24,0	1/1:2,6:9:16.91:115,17,0	1/1:5,9:16:24.89:165,25,0	1/1:5,20:26:46.75:334,47,0	1/1:6,13:21:39.81:274,40,0	0/1:7,8:15:2.41:144,0,2	0/1:3,2:6:18.19:39,0,18	1/1:4,20:24:29.47:348,29,0	1/1:1,8:9:17.86:131,18,0	0/1:1,6:8:12.22:77,0,12	1/1:2,23:25:39.43:452,39,0	1/1:4,13:19:39.80:274,40,0	0/0:15,1:16:14.14:0,14,295	0/0:14,0:14:8.14:0,8,209	0/0:11,1:14:16.97:0,17,289
chr10	7023027	.	G	GA	1460.79	PASS	AB=0.897;AC=5;AF=0.089;AN=56;BaseQRankSum=0.726;DP=615;FS=3.225;HRun=7;HaplotypeScore=95.0087;InbreedingCoeff=0.7742;MQ=57.65;MQ0=17;MQRankSum=-0.256;QD=19.74;ReadPosRankSum=0.694;VQSLOD=3.0442;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:87.08:0,87,823	0/0:5,0:5:9:0,9,83	0/0:25,0:6:6.79:0,7,59	0/0:24,0:6:7.12:0,7,46	0/0:22,0:22:43.90:0,44,346	0/0:22,0:21:35.98:0,36,323	0/0:28,0:27:55.01:0,55,490	0/0:20,0:20:40.95:0,41,348	0/0:16,0:16:33.93:0,34,312	0/0:11,0:11:23.92:0,24,214	0/0:17,0:16:32.81:0,33,318	0/0:27,0:27:50.72:0,51,430	0/0:23,0:23:44.94:0,45,380	0/0:18,0:18:41.96:0,42,361	0/0:21,0:21:33.34:0,33,303	0/0:19,0:19:47.91:0,48,404	0/0:40,0:40:85.45:0,85,753	0/0:26,0:24:59.87:0,60,502	0/0:24,0:22:50.91:0,51,441	0/0:16,0:16:32.04:0,32,260	0/0:16,0:16:30.01:0,30,269	0/0:19,0:18:29.99:0,30,269	0/0:19,0:19:23.44:0,23,217	0/0:29,0:29:59.77:0,60,508	0/0:19,0:19:47.97:0,48,412	0/1:31,4:34:3.79:702,0,4	1/1:22,2:24:47.93:512,48,0	1/1:15,0:15:35.99:377,36,0
chr10	7023033	.	A	AAG	4140.92	PASS	AB=0.990;AC=45;AF=0.804;AN=56;BaseQRankSum=-5.699;DP=626;FS=2.556;HRun=0;HaplotypeScore=102.6424;InbreedingCoeff=0.6989;MQ=57.84;MQ0=16;MQRankSum=1.962;QD=8.06;ReadPosRankSum=0.902;VQSLOD=3.0875;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:32:81.14:0,81,872	1/1:7,0:7:8.72:49,9,0	0/1:30,0:8:0.31:0,0,71	0/1:26,0:6:14.67:15,0,50	1/1:21,0:21:36.14:233,36,0	1/1:21,0:20:37.97:214,38,0	1/1:27,1:27:41.42:265,41,0	1/1:19,0:19:32.42:231,32,0	1/1:17,1:18:29.31:196,29,0	1/1:11,0:11:8.67:55,9,0	1/1:18,1:18:43.76:273,44,0	1/1:31,0:31:40.89:233,41,0	1/1:22,0:22:8.93:161,9,0	1/1:20,0:20:37.91:214,38,0	1/1:21,1:22:26.32:177,26,0	1/1:20,0:20:17.72:244,18,0	1/1:39,0:39:45.54:370,46,0	1/1:25,0:23:51.24:293,51,0	0/1:23,0:21:5.87:99,0,6	1/1:14,0:14:29.18:182,29,0	1/1:17,0:17:11.09:77,11,0	1/1:15,0:15:14.62:83,15,0	1/1:19,0:19:14.25:73,14,0	1/1:25,0:25:18.40:206,18,0	1/1:21,0:21:35.01:197,35,0	0/0:37,0:36:56.68:0,57,283	0/0:22,0:23:38.03:0,38,144	0/0:19,0:19:29.01:0,29,104
chr10	7023034	.	AG	A	1589.93	PASS	AB=0.554;AC=5;AF=0.089;AN=56;BaseQRankSum=-2.252;DP=626;FS=3.923;HRun=1;HaplotypeScore=97.7176;InbreedingCoeff=0.7553;MQ=58.01;MQ0=16;MQRankSum=-0.070;QD=20.38;ReadPosRankSum=1.446;VQSLOD=3.9433;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:32:93.21:0,93,1253	0/0:7,0:7:14.97:0,15,156	0/0:30,0:8:15.83:0,16,134	0/0:25,0:6:10.49:0,10,88	0/0:21,0:21:48.11:0,48,626	0/0:21,0:20:42.43:0,42,569	0/0:28,0:27:63.15:0,63,814	0/0:21,0:21:57.07:0,57,667	0/0:18,0:18:42.07:0,42,504	0/0:10,0:10:30.05:0,30,324	0/0:20,0:19:53.95:0,54,628	0/0:30,0:30:57.09:0,57,676	0/0:22,0:22:45.14:0,45,603	0/0:19,0:19:48.10:0,48,607	0/0:20,0:20:42.02:0,42,476	0/0:22,0:22:65.91:0,66,780	0/0:39,0:39:99:0,111,1292	0/0:24,0:22:66.15:0,66,841	0/0:22,0:20:45.98:0,46,594	0/0:15,0:15:35.86:0,36,448	0/0:17,0:17:32.99:0,33,405	0/0:16,0:16:30.06:0,30,374	0/0:19,0:19:29.48:0,29,309	0/0:25,0:25:60.18:0,60,802	0/0:22,0:22:51.03:0,51,644	0/1:7,29:35:38.43:743,0,38	1/1:4,19:23:35.54:556,36,0	1/1:0,19:19:35.45:420,35,0
chr10	7023048	.	A	AG	9620.86	PASS	AB=0.540;AC=43;AF=0.768;AN=56;BaseQRankSum=-13.037;DP=647;FS=17.074;HRun=1;HaplotypeScore=79.5930;InbreedingCoeff=0.8497;MQ=60.75;MQ0=16;MQRankSum=1.907;QD=20.34;ReadPosRankSum=4.389;VQSLOD=3.8345;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:33:92.98:0,93,1076	1/1:0,6:6:9.01:118,9,0	0/0:34,0:14:15.21:0,15,247	0/0:25,0:8:21.52:0,22,140	1/1:2,20:22:42.11:537,42,0	1/1:2,20:22:24.60:499,25,0	1/1:4,24:27:20.87:538,21,0	1/1:3,21:24:55.49:567,55,0	1/1:2,20:22:29.99:374,30,0	1/1:1,4:4:9.01:101,9,0	1/1:2,19:18:47.81:559,48,0	1/1:2,26:28:41.97:555,42,0	1/1:2,21:23:25.53:455,26,0	1/1:4,19:23:38.14:515,38,0	1/1:1,26:25:27:333,27,0	1/1:12,11:23:46.46:659,46,0	1/1:4,31:34:64.51:963,65,0	1/1:8,17:22:57.06:687,57,0	1/1:12,5:16:17.90:330,18,0	1/1:5,14:19:2.35:267,2,0	1/1:4,12:16:17.23:221,17,0	1/1:2,12:14:12.86:195,13,0	1/1:2,15:17:14.43:165,14,0	0/1:4,23:27:1.23:509,0,1	1/1:5,23:28:17.51:474,18,0	0/0:30,1:31:10.80:0,11,145	0/0:26,0:26:27.64:0,28,82	0/0:24,0:24:10.64:0,11,54
chr10	7027515	.	GAGAC	G	26604.43	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-0.200;DP=713;FS=9.988;HRun=0;HaplotypeScore=138.6447;InbreedingCoeff=0.9951;MQ=73.33;MQ0=1;MQRankSum=-6.313;QD=47.00;ReadPosRankSum=4.066;VQSLOD=5.2412;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,151,3069	1/1:0,6:6:18.06:342,18,0	0/0:24,0:24:66.12:0,66,1570	0/0:16,0:16:45.15:0,45,1161	1/1:1,20:21:51.13:927,51,0	1/1:0,24:24:66.23:1253,66,0	1/1:1,23:24:60.21:1139,60,0	1/1:1,22:23:63.22:1188,63,0	1/1:2,24:26:60.21:1139,60,0	1/1:1,22:23:69.22:1272,69,0	1/1:0,14:14:33.11:626,33,0	1/1:1,20:22:60.21:1139,60,0	1/1:1,34:35:81.28:1538,81,0	1/1:0,26:26:75.26:1424,75,0	1/1:1,34:35:96.32:1822,96,0	1/1:0,34:33:87.26:1616,87,0	1/1:0,29:29:70.12:1312,70,0	1/1:2,33:35:75.26:1405,75,0	1/1:0,14:14:42.12:754,42,0	1/1:3,26:29:66.23:1252,66,0	1/1:3,36:39:90.31:1709,90,0	1/1:2,22:24:60.16:1102,60,0	1/1:1,15:16:42.14:797,42,0	1/1:1,45:46:99:1940,106,0	1/1:0,21:21:48.16:911,48,0	0/0:24,1:25:18.28:0,18,1888	0/0:23,0:23:66.23:0,66,1777	0/0:6,0:6:18.06:0,18,486
chr10	7028050	.	C	CGT	835.62	PASS	AB=0.974;AC=31;AF=0.620;AN=50;BaseQRankSum=-1.711;DP=565;FS=0.000;HRun=0;HaplotypeScore=113.5115;InbreedingCoeff=0.4564;MQ=64.23;MQ0=15;MQRankSum=2.387;QD=2.51;ReadPosRankSum=-0.644;VQSLOD=2.1954;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:40,0:40:29.91:243,30,0	0/0:12,0:12:8.68:0,9,89	./.	./.	0/0:14,0:13:6:0,6,55	1/1:21,0:21:14.98:195,15,0	0/1:24,0:23:0:1,0,0	1/1:21,0:20:2.97:20,3,0	1/1:15,6:22:3.01:44,3,0	0/1:25,0:24:0:0,0,0	0/0:20,0:20:3:0,3,32	1/1:17,0:17:2.99:24,3,0	1/1:14,0:13:3.01:42,3,0	1/1:24,0:22:2.68:25,3,0	0/0:20,0:20:9.02:0,9,96	0/1:11,0:11:15.77:16,0,47	1/1:23,0:23:18.44:176,18,0	0/0:24,0:24:12:0,12,128	1/1:11,0:10:3.01:44,3,0	1/1:13,0:13:2.99:23,3,0	0/0:22,0:22:6.01:0,6,64	1/1:14,0:12:3:25,3,0	1/1:12,0:12:3.01:43,3,0	1/1:27,0:26:2.68:24,3,0	1/1:10,3:13:2.99:44,3,0	./.	0/0:25,0:30:16.20:0,16,76	0/0:10,0:12:5.68:0,6,28
chr10	7033418	.	A	AGAG	5452.16	PASS	AB=0.598;AC=47;AF=0.839;AN=56;BaseQRankSum=-3.523;DP=610;FS=19.771;HRun=0;HaplotypeScore=71.4105;InbreedingCoeff=0.4113;MQ=60.70;MQ0=32;MQRankSum=2.565;QD=11.65;ReadPosRankSum=0.726;VQSLOD=2.8405;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:33:50.94:0,51,539	1/1:0,6:6:6.02:121,6,0	0/0:57,0:14:6.11:0,6,88	0/0:51,0:17:6.88:0,7,57	1/1:6,12:17:23.71:209,24,0	1/1:22,0:22:15.69:303,16,0	1/1:8,16:24:15:302,15,0	1/1:19,0:15:12:106,12,0	1/1:10,16:27:15.05:301,15,0	1/1:7,7:13:20.91:232,21,0	1/1:4,5:9:8.96:138,9,0	1/1:8,11:20:14.82:285,15,0	1/1:9,12:21:18.06:360,18,0	1/1:7,11:18:9.03:180,9,0	1/1:6,13:20:18.06:361,18,0	1/1:7,20:26:18.06:362,18,0	1/1:10,13:24:17.85:314,18,0	1/1:5,12:17:4.08:288,4,0	1/1:9,4:8:14.93:147,15,0	1/1:13,0:11:18.42:153,18,0	0/1:13,34:46:6.85:283,0,7	0/1:4,6:10:11.86:111,0,12	1/1:5,13:18:1.82:59,2,0	0/1:7,13:19:3.27:226,0,3	1/1:3,8:10:3:55,3,0	1/1:21,0:20:38.05:366,38,0	1/1:15,0:15:6.04:91,6,0	1/1:8,0:7:7.58:99,8,0
chr10	7033438	.	A	AGGAGGT	2635.92	PASS	AB=1.000;AC=28;AF=0.500;AN=56;BaseQRankSum=3.530;DP=527;FS=6.157;HRun=0;HaplotypeScore=94.0149;InbreedingCoeff=-0.5379;MQ=58.45;MQ0=29;MQRankSum=0.379;QD=6.03;ReadPosRankSum=8.372;VQSLOD=-0.1062;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:27:65.87:0,66,893	0/1:6,0:6:25.61:26,0,31	0/0:32,0:11:23.66:0,24,215	0/0:29,0:15:26.12:0,26,277	0/1:14,0:13:15.32:101,0,15	0/1:19,0:18:97.75:174,0,98	0/1:21,0:21:64.28:64,0,84	0/1:22,0:19:69.94:70,0,189	0/1:24,0:24:60.68:61,0,114	0/1:9,0:8:8.44:70,0,8	0/1:8,0:7:9.10:43,0,9	0/1:19,0:19:49.84:50,0,98	0/1:19,0:17:46.02:84,0,46	0/1:11,0:11:13.06:43,0,13	0/1:17,0:17:26.07:88,0,26	0/1:24,0:24:71.80:83,0,72	0/1:22,0:21:45.02:85,0,45	0/1:18,0:18:51.98:88,0,52	0/1:21,0:11:1.71:66,0,2	0/1:13,0:12:28.38:94,0,28	0/1:50,0:46:71.54:72,0,152	0/1:13,0:11:28.50:28,0,37	0/1:16,0:16:12.76:13,0,19	0/1:22,0:21:41.63:42,0,149	0/1:10,0:9:17.90:49,0,18	1/1:4,14:17:48.04:866,48,0	1/1:4,6:12:8.70:223,9,0	1/1:2,5:6:6.02:214,6,0
chr10	7033795	.	AT	A	11936.88	PASS	AB=0.654;AC=43;AF=0.827;AN=52;BaseQRankSum=10.051;DP=622;FS=4.464;HRun=2;HaplotypeScore=93.3008;InbreedingCoeff=0.9180;MQ=38.09;MQ0=70;MQRankSum=-1.733;QD=24.26;ReadPosRankSum=0.203;VQSLOD=4.4779;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:39:54.15:0,54,765	1/1:2,5:5:12.04:155,12,0	./.	./.	1/1:3,26:26:48.07:582,48,0	1/1:3,25:25:51.17:660,51,0	1/1:6,9:10:27.07:326,27,0	1/1:7,29:34:78.21:989,78,0	1/1:2,15:15:30.10:389,30,0	1/1:6,25:25:72.22:917,72,0	1/1:3,14:13:21.07:272,21,0	1/1:4,24:24:54.18:699,54,0	1/1:6,24:27:44.46:582,44,0	1/1:2,33:33:78.25:1009,78,0	1/1:2,28:29:60.20:777,60,0	1/1:2,24:24:57.19:738,57,0	1/1:4,15:17:30.10:389,30,0	0/1:8,9:11:0.14:248,0,0	1/1:1,16:17:51.17:660,51,0	1/1:2,15:14:39.07:486,39,0	1/1:5,15:15:30.06:371,30,0	1/1:1,18:18:33.11:427,33,0	1/1:1,13:13:27.09:349,27,0	1/1:3,15:15:30.05:370,30,0	1/1:2,19:19:42.14:544,42,0	0/0:29,0:24:72.23:0,72,1057	0/0:42,0:33:63.21:0,63,932	0/0:15,0:10:24.01:0,24,332
chr10	7035427	.	TG	T	10100.86	PASS	AB=1.000;AC=51;AF=0.911;AN=56;BaseQRankSum=-0.440;DP=605;FS=1.243;HRun=10;HaplotypeScore=67.7187;InbreedingCoeff=0.7866;MQ=74.46;MQ0=0;MQRankSum=-2.709;QD=18.33;ReadPosRankSum=3.727;VQSLOD=5.5832;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:75.18:0,75,814	1/1:1,8:9:20.99:182,21,0	0/1:21,0:20:8.03:8,0,197	0/0:23,0:18:15.52:0,16,190	1/1:2,14:16:44.87:366,45,0	1/1:2,20:22:50.99:443,51,0	1/1:5,20:25:53.97:469,54,0	1/1:3,11:14:35.97:308,36,0	1/1:0,12:12:24:208,24,0	1/1:7,22:29:68.98:598,69,0	1/1:5,9:14:20.33:148,20,0	1/1:1,26:27:56.93:487,57,0	1/1:8,18:26:14.80:357,15,0	1/1:3,15:18:41.98:364,42,0	1/1:2,23:26:64.97:553,65,0	1/1:3,24:27:65.98:573,66,0	1/1:3,33:36:80.91:695,81,0	1/1:2,31:33:80.98:703,81,0	1/1:4,7:11:23.96:200,24,0	1/1:5,11:16:32.89:277,33,0	1/1:9,20:29:59.96:517,60,0	1/1:5,11:16:15.05:228,15,0	1/1:4,18:22:47.92:416,48,0	1/1:5,36:42:98.01:839,98,0	1/1:3,13:16:29.98:260,30,0	1/1:5,15:20:44.94:381,45,0	1/1:1,16:17:44.99:389,45,0	1/1:1,6:7:14.99:130,15,0
chr10	7036610	.	TA	T	1698.88	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=10.102;DP=627;FS=4.496;HRun=8;HaplotypeScore=61.0984;InbreedingCoeff=0.9961;MQ=70.74;MQ0=0;MQRankSum=-0.596;QD=22.96;ReadPosRankSum=1.590;VQSLOD=4.3306;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:90.28:0,90,1086	0/0:8,0:8:24.07:0,24,290	0/0:12,0:12:29.59:0,30,286	0/0:8,0:8:18:0,18,195	0/0:38,0:39:99:0,108,1274	0/0:23,0:23:69.20:0,69,824	0/0:19,0:19:54.14:0,54,630	0/0:31,0:31:72.22:0,72,869	0/0:27,0:27:66.20:0,66,791	0/0:28,0:28:69.20:0,69,812	0/0:30,0:30:69.21:0,69,833	0/0:20,0:20:54.15:0,54,637	0/0:18,0:18:45.13:0,45,532	0/0:17,0:17:48.15:0,48,580	0/0:19,0:19:54.16:0,54,643	0/0:25,0:25:69.20:0,69,822	0/0:17,0:17:48.14:0,48,569	0/0:27,0:27:72.22:0,72,868	0/0:18,0:18:48.14:0,48,569	0/0:20,0:20:54.15:0,54,631	0/0:18,0:18:48.12:0,48,558	0/0:17,0:17:51.13:0,51,594	0/0:29,0:29:87.27:0,87,1050	0/0:21,0:21:54.15:0,54,642	0/0:29,1:30:49.25:0,49,868	1/1:0,23:23:66.05:627,66,0	1/1:3,34:37:87.11:838,87,0	1/1:0,14:14:39.06:377,39,0
chr10	7036923	.	G	GC	20367.25	PASS	AB=0.897;AC=45;AF=0.804;AN=56;BaseQRankSum=-13.638;DP=622;FS=0.000;HRun=1;HaplotypeScore=55.2614;InbreedingCoeff=0.8831;MQ=86.03;MQ0=0;MQRankSum=-4.974;QD=38.57;ReadPosRankSum=3.629;VQSLOD=5.2331;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:93.29:0,93,1191	1/1:0,13:13:30.06:424,30,0	0/0:21,0:21:58.72:0,59,702	0/0:20,0:20:57.15:0,57,697	1/1:0,29:29:75.25:1120,75,0	1/1:0,21:20:54.18:809,54,0	1/1:1,23:24:63.17:919,63,0	1/1:2,26:28:72.23:1059,72,0	1/1:1,23:24:69.23:1033,69,0	1/1:3,17:20:51.15:737,51,0	1/1:0,22:22:66.22:985,66,0	1/1:1,18:19:51.17:762,51,0	1/1:0,22:22:63.21:941,63,0	1/1:0,21:21:60.20:898,60,0	1/1:0,28:28:84.28:1258,84,0	1/1:1,24:25:66.22:989,66,0	1/1:0,21:21:63.21:944,63,0	1/1:0,16:16:39.13:584,39,0	1/1:0,15:15:42.10:583,42,0	1/1:0,34:34:93.23:1339,93,0	1/1:0,19:19:57.19:853,57,0	1/1:1,18:19:57.19:848,57,0	1/1:3,31:34:87.29:1294,87,0	1/1:0,21:21:51.17:764,51,0	1/1:0,27:27:78.26:1168,78,0	0/1:23,3:26:54.81:55,0,816	0/0:15,0:14:42.14:0,42,544	0/0:5,0:5:15.05:0,15,194
chr10	7037459	.	T	TG	5089.85	PASS	AB=0.806;AC=20;AF=0.385;AN=52;BaseQRankSum=5.801;DP=857;FS=0.391;HRun=1;HaplotypeScore=168.2909;InbreedingCoeff=-0.6678;MQ=42.31;MQ0=120;MQRankSum=1.771;QD=7.46;ReadPosRankSum=6.405;VQSLOD=1.8547;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:50:80.56:0,81,985	0/0:6,0:6:12.03:0,12,141	./.	./.	0/0:10,0:5:5.61:0,6,49	0/1:13,1:12:37.84:38,0,227	0/1:29,9:27:99:287,0,412	0/0:18,0:2:6.02:0,6,76	0/1:31,8:33:99:341,0,547	0/1:22,8:22:99:284,0,379	0/0:5,0:2:3.01:0,3,39	0/1:39,13:50:99:472,0,947	0/1:31,5:33:99:263,0,624	0/1:36,11:44:99:373,0,869	0/1:32,15:45:99:349,0,799	0/1:24,13:37:99:281,0,640	0/1:22,11:27:99:319,0,349	0/1:17,10:24:99:369,0,291	0/1:18,2:4:65.14:78,0,65	0/1:11,5:12:99:101,0,131	0/1:96,31:97:99:648,0,965	0/0:14,4:14:18.64:0,19,268	0/1:8,4:10:54.87:97,0,55	0/1:29,9:27:99:305,0,297	0/1:11,4:12:89.70:106,0,90	0/1:16,1:10:54.71:55,0,233	0/1:18,5:19:99:134,0,370	0/1:8,6:12:99:191,0,195
chr10	7040336	.	GT	G	17930.39	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=7.201;DP=620;FS=2.076;HRun=2;HaplotypeScore=68.4120;InbreedingCoeff=0.9955;MQ=85.78;MQ0=0;MQRankSum=-4.706;QD=38.15;ReadPosRankSum=2.037;VQSLOD=5.6106;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,126,2008	1/1:0,12:12:36.12:503,36,0	0/0:25,0:25:72.22:0,72,1062	0/0:25,0:25:54.23:0,54,972	1/1:0,19:19:54.18:746,54,0	1/1:0,20:20:57.19:796,57,0	1/1:0,33:33:90.30:1258,90,0	1/1:0,21:21:63.20:861,63,0	1/1:0,19:19:51.17:712,51,0	1/1:0,27:27:81.27:1127,81,0	1/1:0,10:10:21.07:293,21,0	1/1:0,23:23:60.20:838,60,0	1/1:0,25:25:69.23:964,69,0	1/1:0,24:24:72.24:1005,72,0	1/1:0,32:32:90.30:1250,90,0	1/1:0,23:23:63.21:880,63,0	1/1:0,20:20:51.17:706,51,0	1/1:0,12:12:36.12:503,36,0	1/1:0,29:29:87.24:1162,87,0	1/1:0,16:16:39.13:545,39,0	1/1:0,28:28:72.24:1007,72,0	1/1:0,16:16:42.14:575,42,0	1/1:0,16:16:36.12:497,36,0	1/1:1,19:20:57.18:781,57,0	1/1:0,25:25:66.22:922,66,0	0/0:22,1:22:24.26:0,24,963	0/0:26,0:26:75.26:0,75,1188	0/0:6,0:6:15.05:0,15,240
chr10	7041347	.	T	TCTC	18966.04	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-0.195;DP=605;FS=1.898;HRun=0;HaplotypeScore=181.0631;InbreedingCoeff=0.9834;MQ=79.07;MQ0=0;MQRankSum=-6.358;QD=40.27;ReadPosRankSum=0.916;VQSLOD=5.5438;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:96.32:0,96,1411	1/1:4,8:12:27.05:516,27,0	0/0:20,0:20:34:0,34,488	0/0:21,0:21:45.59:0,46,633	1/1:6,16:22:33.11:682,33,0	1/1:5,13:18:33.11:683,33,0	1/1:9,21:30:56.74:1106,57,0	1/1:9,10:19:36.12:738,36,0	1/1:2,15:17:45.11:890,45,0	1/1:4,17:22:57.20:1144,57,0	1/1:4,9:13:15.05:311,15,0	1/1:7,20:27:60.21:1240,60,0	1/1:3,15:19:48.16:968,48,0	1/1:4,6:10:21.01:354,21,0	1/1:5,15:20:48.16:993,48,0	1/1:5,12:17:45.15:908,45,0	1/1:19,24:43:49.13:1691,49,0	1/1:6,17:23:54.19:1114,54,0	1/1:12,7:19:27.09:489,27,0	1/1:7,10:17:36.12:698,36,0	1/1:10,19:28:42.14:822,42,0	1/1:4,13:17:39.13:808,39,0	1/1:8,17:25:42.14:868,42,0	1/1:8,17:25:42.14:868,42,0	1/1:9,18:27:54.14:1075,54,0	0/0:23,0:23:57.19:0,57,827	0/0:22,0:22:54.18:0,54,794	0/0:7,0:7:9.03:0,9,133
chr10	7042565	.	TA	T	997.27	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=6.903;DP=508;FS=8.925;HRun=10;HaplotypeScore=53.8752;InbreedingCoeff=0.9051;MQ=79.65;MQ0=0;MQRankSum=-2.318;QD=19.18;ReadPosRankSum=1.970;VQSLOD=4.2677;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:81.10:0,81,861	0/0:6,0:6:15.04:0,15,166	0/0:19,0:19:32.91:0,33,311	0/0:17,0:17:11.29:0,11,167	0/0:14,1:15:9.99:0,10,319	0/0:13,0:13:36.08:0,36,383	0/0:29,0:29:68.76:0,69,731	0/0:24,0:24:63.13:0,63,662	0/0:15,0:15:42.10:0,42,457	0/0:20,0:20:51.13:0,51,558	0/0:18,0:18:45.06:0,45,472	0/0:16,0:16:39.09:0,39,422	0/0:15,0:15:33.07:0,33,356	0/0:22,0:22:60.16:0,60,664	0/0:13,0:13:33.09:0,33,363	0/0:24,0:23:66.18:0,66,729	0/0:29,0:29:75.17:0,75,812	0/0:17,0:19:47.96:0,48,512	0/0:30,1:31:58.25:0,58,858	0/0:23,0:24:60:0,60,645	0/0:10,0:10:27.07:0,27,299	0/0:8,0:8:12.02:0,12,126	0/0:11,0:11:30.07:0,30,325	0/0:11,0:10:4.03:0,4,273	0/0:14,0:15:32.74:0,33,314	1/1:3,17:20:20.80:410,21,0	1/1:2,12:14:32.99:286,33,0	1/1:1,17:18:50.99:443,51,0
chr10	7044202	.	T	TA	1233.94	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=-7.283;DP=473;FS=1.199;HRun=11;HaplotypeScore=48.6398;InbreedingCoeff=0.7981;MQ=71.50;MQ0=1;MQRankSum=-0.607;QD=16.67;ReadPosRankSum=-0.018;VQSLOD=4.2330;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:76.65:0,77,576	0/0:4,0:4:8.96:0,9,70	0/0:24,0:18:4.16:0,4,96	0/0:21,0:10:14.48:0,14,100	0/0:20,0:20:47.72:0,48,363	0/0:20,0:20:41.78:0,42,323	0/0:8,0:10:25.88:0,26,185	0/0:29,0:29:56.72:0,57,438	0/0:9,0:9:20.90:0,21,160	0/0:15,0:18:36.92:0,37,264	0/0:13,0:15:28.90:0,29,212	0/0:13,0:13:32.47:0,32,242	0/0:10,0:10:23.75:0,24,175	0/0:11,0:11:21.38:0,21,163	0/0:11,0:11:23.88:0,24,183	0/0:18,0:18:38.78:0,39,297	0/0:22,0:22:59.70:0,60,458	0/0:21,0:22:49.07:0,49,346	0/0:32,1:33:38.25:0,38,478	0/0:13,0:13:26.84:0,27,207	0/0:9,0:9:20.90:0,21,162	0/1:4,0:4:0.54:1,0,18	0/0:6,0:6:14.94:0,15,116	0/0:8,0:8:17.92:0,18,139	0/0:17,0:17:47.81:0,48,371	1/1:8,22:30:20.80:599,21,0	1/1:4,13:17:6.83:251,7,0	1/1:3,18:22:51.10:518,51,0
chr10	7044587	.	CTTT	C	3959.59	PASS	AC=42;AF=0.778;AN=54;BaseQRankSum=-7.819;DP=260;FS=1.499;HRun=13;HaplotypeScore=45.9595;InbreedingCoeff=0.7577;MQ=70.98;MQ0=0;MQRankSum=-0.935;QD=20.84;ReadPosRankSum=2.096;VQSLOD=1.8238;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:11:20.93:0,21,164	1/1:0,1:1:3.01:36,3,0	0/0:18,0:9:15.19:0,15,158	0/0:8,0:8:17.49:0,17,148	1/1:0,11:12:23.93:248,24,0	1/1:1,14:15:30.09:365,30,0	1/1:0,5:5:12.04:146,12,0	1/1:8,16:24:39.91:528,40,0	1/1:1,5:6:9.02:109,9,0	1/1:3,7:11:19.38:250,19,0	1/1:3,5:8:11.97:143,12,0	1/1:0,6:6:12.04:146,12,0	1/1:1,3:4:3.54:101,4,0	1/1:3,3:7:2.96:36,3,0	1/1:1,2:3:5.99:73,6,0	1/1:2,4:6:12.02:144,12,0	1/1:2,15:17:21.06:255,21,0	1/1:1,19:20:33.07:402,33,0	1/1:5,8:12:15.23:231,15,0	1/1:0,8:8:24.04:274,24,0	1/1:3,0:3:2.98:36,3,0	./.	1/1:0,4:4:6.02:73,6,0	1/1:2,1:3:2.98:36,3,0	1/1:2,12:14:27.04:326,27,0	0/0:11,0:11:22.62:0,23,258	0/0:8,0:8:15.05:0,15,181	0/0:13,0:13:21.06:0,21,253
chr10	7044591	.	T	TC	656.87	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=-6.197;DP=254;FS=5.795;HRun=0;HaplotypeScore=50.9454;InbreedingCoeff=0.6784;MQ=74.21;MQ0=0;MQRankSum=1.854;QD=17.29;ReadPosRankSum=1.807;VQSLOD=5.1733;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:29.91:0,30,238	0/0:1,0:1:2.97:0,3,20	0/0:20,0:9:13.58:0,14,132	0/1:11,0:9:1.02:1,0,112	0/0:13,0:13:29.64:0,30,205	0/0:14,0:14:29.67:0,30,204	0/0:5,0:5:11.87:0,12,81	0/0:22,0:22:58.25:0,58,402	0/0:6,0:6:11.90:0,12,88	0/0:10,0:10:29.78:0,30,224	0/0:7,0:7:20.86:0,21,159	0/0:6,0:6:11.87:0,12,81	0/0:4,0:4:11.91:0,12,90	0/0:5,0:5:8.95:0,9,69	0/0:3,0:3:8.93:0,9,65	0/0:5,0:5:14.87:0,15,105	0/0:16,0:16:22.81:0,23,148	0/0:21,0:21:41.59:0,42,292	0/0:14,0:13:31.67:0,32,250	0/0:8,0:8:23.75:0,24,164	0/0:3,0:3:6:0,6,54	0/0:1,0:1:0:0,0,0	0/0:4,0:4:5.93:0,6,40	0/0:2,0:2:5.97:0,6,47	0/0:15,0:15:32.73:0,33,241	1/1:0,11:11:30.01:328,30,0	1/1:0,7:7:15.05:194,15,0	1/1:0,9:9:21.07:271,21,0
chr10	7045173	.	A	ATT	833.04	PASS	AB=0.870;AC=8;AF=0.143;AN=56;BaseQRankSum=3.885;DP=656;FS=0.605;HRun=2;HaplotypeScore=142.2811;InbreedingCoeff=0.7162;MQ=63.02;MQ0=14;MQRankSum=-1.102;QD=6.17;ReadPosRankSum=0.398;VQSLOD=0.0591;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:36:21.08:21,0,299	0/0:12,0:12:19.16:0,19,133	0/0:45,0:27:61.43:0,61,575	0/0:42,0:21:50.03:0,50,415	0/0:22,0:22:41.72:0,42,327	0/1:22,0:21:1.08:1,0,85	0/0:30,0:29:13.13:0,13,289	0/0:39,0:38:66.13:0,66,554	0/0:14,0:14:16.18:0,16,151	0/0:20,0:20:36.02:0,36,301	0/0:22,0:21:32.91:0,33,273	0/0:13,0:13:17.15:0,17,125	0/0:22,0:21:39.57:0,40,281	0/0:12,0:11:16.71:0,17,120	0/0:32,0:32:56.74:0,57,465	0/0:23,0:21:26.49:0,26,246	0/0:16,0:16:8.07:0,8,141	0/0:16,0:15:30.80:0,31,199	0/0:18,0:17:39.27:0,39,325	0/0:25,0:24:35.04:0,35,274	0/0:9,0:8:11.69:0,12,99	0/0:29,0:29:32.67:0,33,273	0/0:19,0:18:26.68:0,27,220	0/0:16,0:15:20.82:0,21,172	0/0:25,0:24:50.82:0,51,411	1/1:20,1:22:27.55:496,28,0	1/1:6,22:28:20.23:240,20,0	1/1:23,0:22:17.55:221,18,0
chr10	7047193	.	AACAC	A	1727.23	PASS	AB=0.783;AC=18;AF=0.346;AN=52;BaseQRankSum=1.596;DP=567;FS=6.510;HRun=0;HaplotypeScore=100.8136;InbreedingCoeff=0.4450;MQ=62.03;MQ0=8;MQRankSum=1.961;QD=7.48;ReadPosRankSum=2.439;VQSLOD=1.1622;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:31:15.05:0,15,299	1/1:8,5:14:18.05:263,18,0	./.	./.	1/1:12,10:23:15.05:235,15,0	0/0:29,0:29:37.01:0,37,832	0/0:23,0:25:21.48:0,21,337	0/1:19,1:19:12.49:40,0,12	0/0:10,0:17:9.03:0,9,152	1/1:14,8:21:24.04:328,24,0	1/1:12,9:21:12.04:188,12,0	0/0:9,0:17:11.13:0,11,56	0/1:11,1:18:22.40:56,0,22	0/1:10,2:15:12.85:82,0,13	1/1:15,14:30:14.60:363,15,0	0/0:16,0:20:23.55:0,24,444	0/0:23,0:27:38.87:0,39,856	0/1:7,5:13:55.70:154,0,56	0/1:13,1:13:32.15:32,0,210	0/0:31,0:31:53.92:0,54,1121	1/1:15,8:23:8.99:141,9,0	0/0:7,0:11:8.47:0,8,46	0/0:9,0:17:13.72:0,14,61	0/1:10,0:17:29.90:30,0,96	0/0:16,0:16:18.93:0,19,404	0/0:11,0:20:36.12:0,36,782	0/0:18,0:26:24.04:0,24,465	0/0:5,0:9:15.05:0,15,265
chr10	7050110	.	G	GT	4913.74	PASS	AB=0.618;AC=46;AF=0.821;AN=56;BaseQRankSum=0.446;DP=473;FS=2.518;HRun=7;HaplotypeScore=104.6466;InbreedingCoeff=0.4138;MQ=67.13;MQ0=3;MQRankSum=-1.837;QD=11.93;ReadPosRankSum=0.860;VQSLOD=3.9172;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:60.08:0,60,574	0/1:6,6:12:1.39:70,0,1	0/0:21,0:12:23.76:0,24,171	0/0:17,0:10:26.59:0,27,228	1/1:14,6:20:21.44:302,21,0	1/1:12,0:12:4.95:123,5,0	1/1:10,7:17:26.34:336,26,0	1/1:13,14:27:50.16:443,50,0	1/1:2,5:7:6.02:69,6,0	1/1:20,5:25:35.87:415,36,0	1/1:20,1:23:3.79:158,4,0	0/1:4,5:9:13.74:89,0,14	0/1:5,7:12:23.58:104,0,24	1/1:12,2:15:31.21:240,31,0	1/1:2,9:11:15.04:173,15,0	1/1:8,6:14:5.75:133,6,0	1/1:3,14:17:24.07:276,24,0	1/1:5,8:14:0.60:164,1,0	1/1:17,3:18:20.57:236,21,0	1/1:8,13:22:12.13:206,12,0	1/1:12,3:15:17.07:171,17,0	1/1:4,13:19:20.10:223,20,0	1/1:12,8:20:8.31:223,8,0	0/1:1,7:9:2.66:71,0,3	1/1:10,9:20:28.28:398,28,0	1/1:15,0:17:2.08:36,2,0	1/1:18,0:22:29.18:151,29,0	1/1:3,1:12:17.68:106,18,0
chr10	7050117	.	TC	T	5119.75	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=0.095;DP=448;FS=0.588;HRun=1;HaplotypeScore=85.3872;InbreedingCoeff=0.8901;MQ=66.24;MQ0=3;MQRankSum=-2.018;QD=13.26;ReadPosRankSum=-2.003;VQSLOD=3.0941;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:62.76:0,63,773	1/1:11,0:11:17.64:122,18,0	0/0:19,1:11:23.62:0,24,222	0/0:20,0:11:30:0,30,348	1/1:17,0:17:35.29:222,35,0	1/1:12,0:12:15.87:110,16,0	1/1:16,0:16:39.13:274,39,0	1/1:28,0:27:52.61:357,53,0	1/1:7,0:7:11.70:86,12,0	1/1:21,2:23:55.13:380,55,0	1/1:21,0:21:39.19:282,39,0	1/1:8,0:8:4.59:70,5,0	1/1:13,0:13:8.37:80,8,0	1/1:15,0:15:28.19:195,28,0	1/1:12,0:12:26.34:184,26,0	1/1:12,0:12:27.38:175,27,0	1/1:18,0:18:29.13:199,29,0	1/1:12,0:12:14.88:130,15,0	1/1:17,0:15:29.52:197,30,0	1/1:19,0:19:37.32:259,37,0	1/1:13,0:13:31.22:236,31,0	1/1:18,0:18:39.76:262,40,0	1/1:16,0:16:28.76:189,29,0	1/1:10,0:10:10.34:75,10,0	1/1:19,0:19:47.14:336,47,0	1/1:16,1:17:18.13:174,18,0	1/1:20,1:21:50.39:364,50,0	1/1:11,0:11:23.58:161,24,0
chr10	7053836	.	GGTGT	G	5274.23	PASS	AB=0.833;AC=40;AF=0.769;AN=52;BaseQRankSum=1.226;DP=600;FS=5.992;HRun=0;HaplotypeScore=99.5046;InbreedingCoeff=0.6769;MQ=69.77;MQ0=11;MQRankSum=4.329;QD=12.27;ReadPosRankSum=3.241;VQSLOD=3.5989;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:38:5.91:0,6,40	./.	./.	0/0:37,0:23:3.01:0,3,41	1/1:13,6:18:11.98:123,12,0	1/1:7,8:15:15.04:214,15,0	1/1:8,5:13:9.03:142,9,0	0/1:21,0:21:5.93:83,0,6	1/1:7,8:19:24.05:300,24,0	1/1:11,8:20:33.10:454,33,0	1/1:9,8:19:26.97:330,27,0	1/1:10,8:19:15.05:236,15,0	1/1:9,5:16:15.51:198,16,0	1/1:13,11:24:12.04:189,12,0	1/1:9,7:17:15.03:217,15,0	0/1:12,10:24:5.19:401,0,5	1/1:10,9:19:15.05:236,15,0	1/1:15,7:22:12.04:189,12,0	1/1:13,10:24:32.15:499,32,0	1/1:10,3:13:8.99:115,9,0	1/1:25,15:41:18.19:284,18,0	1/1:11,4:16:11.99:142,12,0	1/1:10,8:19:11.99:142,12,0	1/1:15,14:29:30.09:450,30,0	1/1:5,14:18:21.07:331,21,0	0/0:29,0:28:59.77:0,60,940	0/0:13,0:13:27.02:0,27,384	0/0:8,0:12:9.03:0,9,143
chr10	7054417	.	TTATATATATATATATATATATATATA	T	2509.03	PASS	AB=0.760;AC=15;AF=0.682;AN=22;BaseQRankSum=0.849;DP=233;FS=9.468;HRun=0;HaplotypeScore=149.9927;InbreedingCoeff=0.2331;MQ=59.74;MQ0=8;MQRankSum=-1.325;QD=24.84;ReadPosRankSum=1.529;VQSLOD=1.5465;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:11:3.01:0,3,71	./.	./.	./.	./.	./.	./.	1/1:18,0:17:12:135,12,0	1/1:5,0:5:3.01:91,3,0	1/1:9,2:11:9.03:463,9,0	./.	./.	./.	./.	./.	./.	1/1:18,1:18:9.03:547,9,0	0/1:12,7:17:99:396,0,242	1/1:10,4:13:12.04:811,12,0	0/1:6,0:8:0:0,0,0	./.	./.	./.	./.	./.	1/1:1,0:3:6.02:134,6,0	0/0:8,0:10:6.02:0,6,171	0/1:2,0:3:30.03:30,0,52
chr10	7054505	.	GTGTGTGTGTGTT	G	1831.24	PASS	AB=0.985;AC=30;AF=0.556;AN=54;BaseQRankSum=-0.982;DP=296;FS=6.954;HRun=0;HaplotypeScore=87.6189;InbreedingCoeff=0.5058;MQ=50.84;MQ0=39;MQRankSum=1.251;QD=11.03;ReadPosRankSum=3.499;VQSLOD=0.7754;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:11:29.87:0,30,236	1/1:3,0:1:3:25,3,0	0/0:26,0:11:30.04:0,30,316	0/0:21,0:10:27.04:0,27,282	0/0:13,0:13:1.89:0,2,3	1/1:11,0:10:18.53:160,19,0	1/1:12,0:9:17.53:149,18,0	1/1:14,0:12:29.48:250,29,0	0/1:6,0:5:0.86:19,0,1	1/1:2,7:9:20.91:324,21,0	0/0:5,1:6:0:0,0,0	1/1:7,0:5:9:116,9,0	1/1:1,0:1:3:25,3,0	0/0:4,0:3:0.47:0,0,1	1/1:6,0:6:11.97:96,12,0	1/1:9,0:9:0.14:0,0,0	0/0:23,0:21:5.38:0,5,60	0/1:15,1:13:52.96:286,0,53	0/1:7,0:7:27.54:28,0,42	1/1:7,0:7:17.96:143,18,0	1/1:17,0:12:20.24:163,20,0	./.	1/1:8,0:8:8.18:88,8,0	1/1:11,0:10:11.08:84,11,0	0/1:22,0:16:47.94:48,0,54	0/0:4,0:4:11.98:0,12,104	0/0:3,0:3:5.68:0,6,38	0/0:9,0:7:14.88:0,15,116
chr10	7054507	.	GTGTGTGTGTT	G	1995.11	PASS	AB=0.972;AC=31;AF=0.596;AN=52;BaseQRankSum=-1.855;DP=283;FS=5.664;HRun=0;HaplotypeScore=75.2562;InbreedingCoeff=0.5477;MQ=53.94;MQ0=36;MQRankSum=0.149;QD=12.79;ReadPosRankSum=3.777;VQSLOD=0.8480;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:11:29.87:0,30,236	1/1:3,0:1:3:25,3,0	0/0:26,0:11:29.96:0,30,316	0/0:22,0:11:30.03:0,30,305	0/0:11,1:12:0.94:0,1,2	1/1:11,0:10:20.81:208,21,0	1/1:12,0:9:17.70:149,18,0	1/1:14,0:12:29.57:250,30,0	1/1:6,0:5:0.26:20,0,0	1/1:7,1:8:20.93:310,21,0	0/0:3,3:6:0:0,0,0	1/1:6,0:4:9:123,9,0	1/1:1,0:1:3:25,3,0	./.	1/1:5,0:5:11.97:96,12,0	1/1:9,0:9:0.22:0,0,0	0/0:23,0:21:4.83:0,5,40	0/1:10,1:10:12.16:289,0,12	0/1:6,0:6:16.13:28,0,16	1/1:7,0:7:17.97:168,18,0	1/1:17,0:12:20.51:164,21,0	./.	1/1:8,0:8:8.45:112,8,0	1/1:10,0:9:11.22:105,11,0	0/1:22,0:16:2.39:95,0,2	0/0:5,0:5:14.98:0,15,132	0/0:3,0:3:5.68:0,6,38	0/0:9,0:7:14.88:0,15,116
chr10	7054509	.	GTGTGTGTT	G	2207.16	PASS	AC=34;AF=0.630;AN=54;BaseQRankSum=-2.023;DP=287;FS=6.732;HRun=0;HaplotypeScore=69.8905;InbreedingCoeff=0.7144;MQ=60.36;MQ0=34;MQRankSum=0.505;QD=15.01;ReadPosRankSum=4.277;VQSLOD=0.8283;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:16:41.80:0,42,328	1/1:3,0:1:3:25,3,0	0/0:28,0:13:35.56:0,36,378	0/0:23,0:12:33.01:0,33,327	0/0:4,8:12:0.47:0,0,1	1/1:10,0:9:20.82:255,21,0	1/1:12,0:9:17.70:149,18,0	1/1:13,0:12:29.64:250,30,0	1/1:5,0:4:0.62:21,1,0	1/1:8,0:8:20.93:272,21,0	0/0:4,0:4:0:0,0,0	1/1:6,0:4:9:99,9,0	1/1:1,0:1:3:25,3,0	1/1:5,0:4:5.99:49,6,0	1/1:7,0:7:17.96:146,18,0	0/0:9,0:9:0.05:0,0,0	0/0:5,18:21:4.15:0,4,19	1/1:11,0:10:22.47:277,22,0	1/1:6,0:6:3.94:38,4,0	1/1:8,0:8:20.19:201,20,0	1/1:18,0:14:23.77:189,24,0	./.	1/1:6,0:6:8.77:97,9,0	1/1:10,0:9:10.87:124,11,0	1/1:18,0:13:17.59:168,18,0	0/0:5,0:5:14.98:0,15,132	0/0:4,0:4:8.68:0,9,65	0/0:9,0:7:14.88:0,15,116
chr10	7054513	.	GTGTT	G	2384.70	PASS	AB=0.500;AC=35;AF=0.648;AN=54;BaseQRankSum=-2.321;DP=295;FS=7.308;HRun=0;HaplotypeScore=55.6754;InbreedingCoeff=0.7511;MQ=70.94;MQ0=31;MQRankSum=-1.777;QD=14.81;ReadPosRankSum=2.754;VQSLOD=1.8656;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:18:44.80:0,45,353	1/1:3,0:1:3:25,3,0	0/0:32,0:17:41.18:0,41,449	0/0:25,0:14:39.01:0,39,378	0/0:9,0:9:0:0,0,0	1/1:14,0:13:26.50:263,26,0	1/1:10,0:7:17.98:150,18,0	1/1:17,0:16:41.79:357,42,0	1/1:4,0:4:2.25:23,2,0	1/1:8,0:8:20.93:201,21,0	0/0:4,0:4:0:0,0,0	1/1:6,0:4:8.99:74,9,0	1/1:3,0:3:5.99:49,6,0	1/1:6,0:5:8.99:74,9,0	1/1:7,0:7:17.96:146,18,0	0/1:0,7:7:0.58:1,0,1	0/0:20,0:19:0:0,0,0	1/1:10,0:9:23.87:213,24,0	1/1:6,0:6:11.03:78,11,0	1/1:7,0:7:20.18:154,20,0	1/1:21,0:18:35.59:286,36,0	./.	1/1:7,0:7:11.61:98,12,0	1/1:11,0:10:13.98:104,14,0	1/1:14,0:9:20.56:263,21,0	0/0:6,0:6:17.98:0,18,160	0/0:4,0:4:8.68:0,9,65	0/0:9,0:7:14.88:0,15,116
chr10	7054666	.	CATCT	C	2365.67	PASS	AB=0.964;AC=33;AF=0.688;AN=48;BaseQRankSum=4.178;DP=530;FS=2.422;HRun=0;HaplotypeScore=114.5289;InbreedingCoeff=0.4891;MQ=66.68;MQ0=3;MQRankSum=-2.477;QD=7.32;ReadPosRankSum=0.407;VQSLOD=2.0369;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:19:3:27,3,0	0/1:7,0:7:14.87:15,0,129	./.	./.	1/1:10,12:22:27.56:407,28,0	1/1:3,4:10:18.05:237,18,0	0/0:19,4:23:0.47:0,0,1	./.	1/1:12,6:17:9.03:136,9,0	0/0:22,0:26:30.10:0,30,515	0/0:10,0:16:23.76:0,24,396	1/1:10,0:16:6.01:55,6,0	1/1:7,0:12:9.01:84,9,0	1/1:4,0:11:9.01:84,9,0	0/1:23,1:24:15.08:15,0,547	1/1:15,16:31:36.12:542,36,0	1/1:20,0:21:3:27,3,0	0/0:20,0:30:30.10:0,30,530	1/1:16,0:18:6.01:56,6,0	1/1:16,0:22:15.02:140,15,0	1/1:26,7:33:15.05:226,15,0	1/1:6,0:13:12.01:112,12,0	1/1:11,0:18:3:27,3,0	./.	1/1:6,8:14:21.07:316,21,0	0/0:12,0:12:12.04:0,12,277	0/1:13,1:14:24.11:24,0,348	0/0:6,0:8:6.02:0,6,104
chr10	7055598	.	AGT	A	2264.81	PASS	AB=0.822;AC=32;AF=0.667;AN=48;BaseQRankSum=4.148;DP=761;FS=2.685;HRun=0;HaplotypeScore=118.5824;InbreedingCoeff=0.2839;MQ=66.12;MQ0=13;MQRankSum=0.336;QD=4.40;ReadPosRankSum=0.311;VQSLOD=2.7332;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:39,0:43:7.69:8,0,79	0/0:11,0:11:14.89:0,15,148	./.	./.	0/0:18,0:18:15.01:0,15,170	1/1:14,8:21:11.97:115,12,0	1/1:21,9:31:8.88:76,9,0	0/0:34,0:30:6.87:0,7,61	0/1:29,4:33:52.01:52,0,370	0/1:27,0:35:3.74:59,0,4	1/1:10,1:13:5.68:28,6,0	1/1:18,14:33:13.04:280,13,0	1/1:16,6:24:20.63:190,21,0	1/1:16,9:26:30.91:314,31,0	0/0:29,0:29:20.22:0,20,403	0/1:11,8:21:18.44:172,0,18	1/1:16,4:19:0.62:192,1,0	1/1:17,0:21:0.25:61,0,0	1/1:30,6:34:15.04:160,15,0	1/1:17,9:26:5.97:149,6,0	0/0:62,0:63:28.82:0,29,624	1/1:18,9:27:3.18:61,3,0	0/1:9,3:12:41.40:45,0,41	1/1:23,5:30:35.33:314,35,0	0/1:23,4:25:13.68:130,0,14	1/1:20,0:29:2.97:20,3,0	./.	./.
chr10	7055849	.	ATG	A	30.48	PASS	AC=2;AF=0.037;AN=54;BaseQRankSum=2.825;DP=1249;FS=0.000;HRun=0;HaplotypeScore=239.6721;InbreedingCoeff=0.7163;MQ=56.29;MQ0=25;MQRankSum=-4.429;QD=3.39;ReadPosRankSum=-1.945;VQSLOD=2.1597;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:43:90.31:0,90,1498	0/0:26,0:25:66.11:0,66,941	0/0:46,0:19:41.74:0,42,601	0/0:47,0:21:49.84:0,50,674	0/0:42,0:41:99:0,114,1679	0/0:49,0:43:99:0,104,1563	0/0:51,0:47:99:0,120,1674	0/0:80,0:68:99:0,141,2220	0/0:48,0:43:95.61:0,96,1412	0/0:66,0:63:99:0,168,2185	0/0:30,0:30:71.76:0,72,940	0/0:46,0:44:97.14:0,97,1353	0/0:51,0:43:96.30:0,96,1554	0/0:49,0:46:88.39:0,88,1501	0/0:82,0:77:99:0,188,2802	0/0:47,0:45:99:0,117,1786	0/0:39,0:36:80.23:0,80,1261	0/0:37,0:31:63.25:0,63,824	0/0:34,0:28:53.85:0,54,859	0/0:39,0:35:69.80:0,70,1055	0/0:113,0:109:99:0,265,4239	0/0:44,0:43:99:0,102,1447	0/0:35,0:35:92.90:0,93,1376	0/0:62,0:58:99:0,104,1484	0/0:22,0:22:62.82:0,63,1028	0/0:2,0:2:3.01:0,3,51	./.	1/1:5,4:9:5.06:110,5,0
chr10	7055859	.	G	GTA	6144.55	PASS	AB=0.827;AC=21;AF=0.389;AN=54;BaseQRankSum=13.839;DP=1256;FS=0.000;HRun=0;HaplotypeScore=207.3571;InbreedingCoeff=-0.4947;MQ=55.59;MQ0=29;MQRankSum=3.789;QD=6.91;ReadPosRankSum=0.459;VQSLOD=4.1549;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:36:90.15:0,90,1324	0/1:17,7:23:99:223,0,669	0/0:45,0:20:45.09:0,45,539	0/0:50,0:25:61:0,61,757	0/1:32,11:41:99:406,0,1211	0/1:37,10:41:99:291,0,1216	0/1:36,17:49:99:616,0,1221	0/1:68,11:65:99:115,0,2035	0/1:44,9:48:99:227,0,1257	0/1:43,23:64:99:1054,0,1462	0/1:18,12:31:99:495,0,546	0/1:37,13:48:99:584,0,919	0/0:48,0:40:99:0,108,1515	0/1:42,2:41:25.90:26,0,1268	0/1:77,10:82:99:275,0,2194	0/1:43,5:46:99:112,0,1480	0/1:31,10:39:68.16:68,0,1140	0/1:27,9:30:99:426,0,596	0/0:38,0:26:69.17:0,69,934	0/1:26,12:34:99:152,0,864	0/0:116,1:111:99:0,292,4071	0/1:32,11:42:99:416,0,1040	0/1:32,6:38:99:193,0,1096	0/1:45,14:55:99:396,0,1163	0/0:25,0:25:68.85:0,69,988	0/1:3,0:3:28.97:29,0,37	./.	1/1:4,1:5:7.93:43,8,0
chr10	7055882	.	AGT	A	280.17	PASS	AB=0.573;AC=4;AF=0.071;AN=56;BaseQRankSum=5.629;DP=1168;FS=0.000;HRun=0;HaplotypeScore=188.7915;InbreedingCoeff=0.3163;MQ=52.79;MQ0=31;MQRankSum=-5.418;QD=14.75;ReadPosRankSum=-0.826;VQSLOD=3.3097;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:41:84.27:0,84,1378	0/0:23,0:22:45.09:0,45,680	0/0:37,1:11:15.05:0,15,252	0/0:44,0:18:37:0,37,555	0/0:38,0:36:78.25:0,78,1286	0/0:46,0:41:92.67:0,93,1504	0/0:51,0:44:99:0,108,1509	0/0:84,0:66:99:0,153,2337	0/0:49,0:44:99:0,102,1711	0/0:47,0:45:99:0,116,1751	0/0:26,0:26:57.16:0,57,829	0/0:45,0:43:86.19:0,86,1352	0/0:53,0:45:99:0,108,1790	0/0:41,0:39:89.90:0,90,1430	0/0:72,0:69:99:0,140,2247	0/0:49,0:48:99:0,102,1656	0/0:34,0:31:69.23:0,69,1161	0/0:32,0:29:36.12:0,36,971	0/0:37,0:24:51.17:0,51,818	0/0:37,1:34:59.87:0,60,1461	0/0:115,0:105:99:0,258,4220	0/0:34,0:34:74.95:0,75,1241	0/0:32,0:32:68.88:0,69,1075	0/0:48,0:45:83.74:0,84,1381	0/0:24,0:24:59.78:0,60,961	0/1:4,9:12:99:311,0,118	1/1:0,1:1:3.01:39,3,0	0/1:1,4:5:27.35:33,0,27
chr10	7055909	.	A	ATG	199.96	PASS	AB=0.737;AC=3;AF=0.054;AN=56;BaseQRankSum=5.310;DP=1133;FS=4.658;HRun=0;HaplotypeScore=164.7044;InbreedingCoeff=0.4106;MQ=49.85;MQ0=22;MQRankSum=-5.031;QD=11.11;ReadPosRankSum=2.066;VQSLOD=3.2175;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:43:71.94:0,72,894	0/0:14,0:13:24.08:0,24,308	0/0:45,0:8:18.89:0,19,210	0/0:44,0:14:30.09:0,30,370	0/0:38,0:37:87.03:0,87,1066	0/0:39,0:36:74.76:0,75,919	0/0:45,0:37:84.25:0,84,1063	0/0:76,0:62:99:0,102,1272	0/0:51,0:48:99:0,108,1388	0/0:36,0:34:90.29:0,90,1157	0/0:28,0:27:45.06:0,45,544	0/0:39,0:38:77.26:0,77,997	0/0:51,0:48:99:0,117,1486	0/0:43,0:43:92.95:0,93,1180	0/0:68,0:67:99:0,114,1421	0/0:51,0:51:99:0,117,1484	0/0:42,0:40:87.18:0,87,1061	0/0:25,0:25:30.70:0,31,627	0/0:31,0:20:33.05:0,33,391	0/0:39,0:36:87.17:0,87,1092	0/0:118,0:109:99:0,243,3056	0/0:34,0:34:73.95:0,74,915	0/0:26,0:26:53.82:0,54,708	0/0:48,0:45:74.35:0,74,942	0/0:28,0:28:59.76:0,60,747	0/1:9,5:11:52.14:247,0,52	1/1:3,1:2:2.88:44,3,0	0/0:4,2:5:3.47:0,3,28
chr10	7056005	.	A	ATGTG	16037.10	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-9.747;DP=845;FS=37.478;HRun=0;HaplotypeScore=162.7053;InbreedingCoeff=0.9254;MQ=44.26;MQ0=23;MQRankSum=-1.119;QD=22.94;ReadPosRankSum=2.637;VQSLOD=3.0742;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,29:31:21.07:545,21,0	1/1:4,9:13:18.06:456,18,0	0/0:28,0:18:54.16:0,54,914	0/0:36,0:22:51.27:0,51,843	1/1:4,23:22:39.13:1013,39,0	1/1:8,20:20:20.62:841,21,0	1/1:1,15:11:2.93:77,3,0	1/1:9,31:18:23.85:217,24,0	1/1:5,20:19:27:700,27,0	1/1:6,21:24:57.10:1287,57,0	1/1:4,15:17:9.03:234,9,0	1/1:4,31:33:53.94:1361,54,0	1/1:2,41:33:38.60:944,39,0	1/1:7,27:34:30.10:763,30,0	1/1:8,32:36:29.66:778,30,0	1/1:5,28:29:39.09:1013,39,0	1/1:8,9:17:12.02:256,12,0	1/1:9,7:15:20.29:407,20,0	1/1:5,19:17:32.95:802,33,0	1/1:9,10:21:20.95:529,21,0	1/1:6,57:56:30.10:778,30,0	1/1:6,23:24:36.07:879,36,0	1/1:4,20:22:24.08:623,24,0	1/1:17,18:26:42.10:987,42,0	1/1:3,26:25:21.07:545,21,0	0/0:37,0:36:96.32:0,96,1695	0/0:38,0:38:99:0,99,1711	0/0:7,0:7:12.04:0,12,216
chr10	7056042	.	TGG	T	2295.99	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=1.535;DP=824;FS=0.480;HRun=3;HaplotypeScore=249.6931;InbreedingCoeff=0.9481;MQ=47.22;MQ0=8;MQRankSum=-1.866;QD=37.64;ReadPosRankSum=3.885;VQSLOD=2.6059;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:24:35.86:0,36,599	0/0:11,0:11:22.28:0,22,368	0/0:40,0:21:59.34:0,59,936	0/0:49,0:32:86.80:0,87,1299	0/0:30,0:26:48.03:0,48,907	0/0:21,0:18:43.80:0,44,702	0/0:24,0:21:41.82:0,42,722	0/0:34,0:29:69.91:0,70,1239	0/0:23,0:21:41.92:0,42,665	0/0:34,0:32:60.33:0,60,1404	0/0:23,0:19:16.31:0,16,247	0/0:36,0:33:53.16:0,53,1163	0/0:33,0:31:49.14:0,49,1038	0/0:39,0:39:53.68:0,54,841	0/0:42,0:41:35.31:0,35,661	0/0:35,0:30:51.54:0,52,954	0/0:15,0:14:9.16:0,9,411	0/0:19,1:16:15.05:0,15,483	0/0:17,0:14:42.09:0,42,706	0/0:27,0:26:30.79:0,31,488	0/0:46,1:41:41.92:0,42,888	0/0:40,0:35:62.02:0,62,1050	0/0:29,0:26:36.58:0,37,575	0/0:33,0:28:57.19:0,57,1198	0/0:33,0:28:41.32:0,41,545	1/1:1,30:30:87.19:1278,87,0	1/1:1,25:26:69.19:1018,69,0	1/1:0,4:4:9.03:137,9,0
chr10	7056063	.	A	ATGTG	6160.18	PASS	AB=0.964;AC=49;AF=0.942;AN=52;BaseQRankSum=-4.127;DP=824;FS=3.845;HRun=0;HaplotypeScore=261.5539;InbreedingCoeff=-0.0804;MQ=44.36;MQ0=14;MQRankSum=2.261;QD=8.24;ReadPosRankSum=-0.788;VQSLOD=3.5522;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:29,2:29:5.62:112,0,6	1/1:5,0:5:2.28:19,2,0	./.	./.	1/1:29,0:27:17.48:127,17,0	1/1:20,0:19:10.69:70,11,0	1/1:24,1:27:12.27:148,12,0	1/1:41,0:32:5.92:39,6,0	1/1:26,0:28:22.70:231,23,0	1/1:32,0:31:24.63:214,25,0	1/1:22,0:22:17.56:186,18,0	1/1:27,6:31:27.28:562,27,0	1/1:27,4:31:32.83:552,33,0	1/1:30,4:35:26.51:454,27,0	1/1:40,0:43:20.05:267,20,0	1/1:31,1:32:33.76:398,34,0	1/1:19,1:19:20.81:234,21,0	1/1:17,0:16:10.06:63,10,0	1/1:19,0:14:8.94:67,9,0	1/1:33,0:34:15.23:175,15,0	1/1:44,0:37:17.91:163,18,0	1/1:32,8:37:39.62:696,40,0	1/1:19,3:21:17.72:246,18,0	1/1:30,5:33:26.02:708,26,0	1/1:24,1:23:13.98:222,14,0	0/1:25,0:29:57.20:122,0,57	0/1:22,0:26:14.77:42,0,15	1/1:6,0:6:5.96:43,6,0
chr10	7056313	.	A	AG	2991.26	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-10.409;DP=725;FS=5.881;HRun=1;HaplotypeScore=128.1381;InbreedingCoeff=1.0000;MQ=93.44;MQ0=0;MQRankSum=-1.457;QD=39.88;ReadPosRankSum=2.616;VQSLOD=2.9992;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:96.28:0,96,1215	0/0:19,0:18:51.15:0,51,644	0/0:39,0:39:99:0,114,1411	0/0:29,0:29:78.11:0,78,950	0/0:18,0:17:42.12:0,42,530	0/0:26,0:26:63.20:0,63,816	0/0:25,0:25:72.22:0,72,916	0/0:36,0:36:99:0,105,1342	0/0:27,0:27:81.22:0,81,1030	0/0:24,0:22:66.21:0,66,846	0/0:16,0:15:39.13:0,39,506	0/0:25,0:25:69.22:0,69,894	0/0:26,0:26:75.23:0,75,957	0/0:25,0:25:66.21:0,66,856	0/0:32,0:32:87.27:0,87,1114	0/0:26,0:26:66.20:0,66,831	0/0:36,0:36:99:0,99,1285	0/0:17,0:17:51.11:0,51,626	0/0:33,0:33:87.23:0,87,1076	0/0:25,0:22:63.18:0,63,791	0/0:23,0:23:63.20:0,63,805	0/0:23,0:23:66.20:0,66,842	0/0:19,0:19:54.14:0,54,682	0/0:31,0:31:87.25:0,87,1097	0/0:18,0:15:45.11:0,45,550	1/1:1,29:30:87.25:1254,87,0	1/1:0,30:30:81.27:1207,81,0	1/1:0,15:15:45.15:674,45,0
chr10	7056364	.	T	TTC	26798.19	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=4.867;DP=718;FS=5.233;HRun=0;HaplotypeScore=119.2803;InbreedingCoeff=0.9980;MQ=88.52;MQ0=0;MQRankSum=-7.780;QD=48.55;ReadPosRankSum=2.310;VQSLOD=5.4160;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:93.31:0,93,1367	1/1:3,12:14:30.10:550,30,0	0/0:35,0:35:87.29:0,87,1257	0/0:23,0:24:50.62:0,51,859	1/1:0,24:25:63.22:1161,63,0	1/1:1,15:16:42.14:781,42,0	1/1:3,28:31:84.29:1556,84,0	1/1:5,34:39:99:1947,108,0	1/1:1,28:29:81.28:1516,81,0	1/1:0,28:26:78.27:1461,78,0	1/1:2,8:9:18.06:337,18,0	1/1:2,15:18:48.16:880,48,0	1/1:2,26:28:72.25:1329,72,0	1/1:4,25:30:81.27:1429,81,0	1/1:2,33:36:96.33:1740,96,0	1/1:1,33:35:84.29:1573,84,0	1/1:4,32:36:99:1863,102,0	1/1:1,11:12:33.11:618,33,0	1/1:1,28:30:87.16:1547,87,0	1/1:3,27:27:72.25:1348,72,0	1/1:1,28:29:78.27:1461,78,0	1/1:1,15:17:45.15:840,45,0	1/1:1,11:12:33.11:617,33,0	1/1:0,30:30:81.28:1517,81,0	1/1:0,16:13:39.13:730,39,0	0/0:27,0:27:81.27:0,81,1193	0/0:32,0:32:90.29:0,90,1302	0/0:14,0:14:30.10:0,30,440
chr10	7057498	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTA	G	4079.77	PASS	AB=1.000;AC=40;AF=0.741;AN=54;BaseQRankSum=-3.241;DP=499;FS=19.605;HRun=0;HaplotypeScore=300.7318;InbreedingCoeff=0.2525;MQ=41.87;MQ0=65;MQRankSum=2.198;QD=9.78;ReadPosRankSum=1.033;VQSLOD=1.1587;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:22:15.10:0,15,120	1/1:8,0:7:12.02:191,12,0	0/0:17,0:9:8.94:0,9,67	./.	1/1:17,0:14:8.57:56,9,0	1/1:11,0:10:9:109,9,0	1/1:22,0:20:8.16:169,8,0	1/1:22,11:25:3.14:308,3,0	0/1:17,0:16:22.81:37,0,23	1/1:26,0:19:0.93:460,1,0	1/1:9,0:9:11.22:137,11,0	0/1:16,0:13:28.77:38,0,29	1/1:16,0:11:14.99:235,15,0	1/1:18,0:17:13.52:145,14,0	1/1:23,0:20:6.02:100,6,0	1/1:17,0:15:9.02:142,9,0	1/1:19,0:18:13.46:386,13,0	1/1:17,0:17:28.69:369,29,0	1/1:13,0:7:6.84:59,7,0	0/1:16,0:14:6.71:110,0,7	0/1:28,0:26:27.53:141,0,28	1/1:17,0:14:3.01:96,3,0	1/1:12,0:10:14.70:172,15,0	1/1:17,0:15:17.97:231,18,0	0/1:17,0:14:7.99:212,0,8	0/1:27,0:24:99:178,0,192	0/0:15,0:13:19.53:0,20,177	0/0:8,0:3:6.01:0,6,63
chr10	7057532	.	GTGTGTGTATGTGTGTGTA	G	659.19	PASS	AB=1.000;AC=17;AF=0.405;AN=42;BaseQRankSum=-1.741;DP=507;FS=30.824;HRun=0;HaplotypeScore=164.5814;InbreedingCoeff=0.3046;MQ=26.08;MQ0=124;MQRankSum=1.844;QD=3.58;ReadPosRankSum=1.267;VQSLOD=1.3626;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:12:1.36:0,1,3	1/1:6,1:6:5.88:35,6,0	./.	./.	./.	0/0:18,0:17:0.47:0,0,1	0/1:13,0:9:0:0,0,0	0/0:19,0:12:26.96:0,27,324	1/1:19,0:18:14.13:113,14,0	0/1:27,0:20:10.64:346,0,11	./.	1/1:27,1:25:2.31:26,2,0	0/0:12,0:9:0.47:0,0,1	1/1:10,0:10:2.74:12,3,0	0/1:26,0:22:0:0,0,0	1/1:19,0:16:5.80:32,6,0	1/1:14,1:12:5.76:168,6,0	0/1:13,0:13:35.78:36,0,131	0/1:7,0:5:14.78:15,0,36	0/0:15,0:12:3.01:0,3,46	0/0:35,0:22:2.51:0,3,11	./.	./.	./.	0/0:23,0:20:0:0,0,0	0/0:27,0:23:39.66:0,40,639	0/0:16,0:14:20.83:0,21,299	0/0:10,0:4:2.94:0,3,18
chr10	7057542	.	G	GTC	673.17	PASS	AB=0.921;AC=21;AF=0.477;AN=44;BaseQRankSum=-2.391;DP=558;FS=6.131;HRun=0;HaplotypeScore=130.9058;InbreedingCoeff=0.3676;MQ=25.09;MQ0=148;MQRankSum=0.285;QD=2.80;ReadPosRankSum=0.041;VQSLOD=2.1938;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:11:0:0,0,0	1/1:6,1:6:5.05:57,5,0	./.	./.	./.	0/1:16,1:16:0:0,0,0	1/1:9,4:10:2.85:46,3,0	0/1:22,2:14:58.84:59,0,270	1/1:20,1:20:11.86:81,12,0	1/1:23,3:20:2.11:395,2,0	./.	1/1:27,2:27:2.59:18,3,0	1/1:10,2:9:2.92:17,3,0	0/0:12,1:13:6:0,6,55	0/0:24,4:24:0:0,0,0	1/1:14,2:13:5.92:39,6,0	0/1:16,0:13:1.71:13,0,2	0/0:11,0:11:1.92:0,2,184	1/1:12,0:4:9.84:73,10,0	0/0:17,0:15:3.01:0,3,36	0/0:34,1:18:3.23:0,3,15	0/1:22,3:22:0:0,0,0	./.	./.	0/1:18,4:20:0:0,0,0	0/0:28,0:24:56.65:0,57,712	0/0:21,0:19:20.41:0,20,246	0/0:10,0:4:1.23:0,1,15
chr10	7057548	.	GTA	G	301.50	PASS	AB=0.978;AC=19;AF=0.432;AN=44;BaseQRankSum=-1.169;DP=581;FS=35.384;HRun=0;HaplotypeScore=117.7449;InbreedingCoeff=0.1402;MQ=25.19;MQ0=160;MQRankSum=0.206;QD=0.96;ReadPosRankSum=-1.322;VQSLOD=0.3998;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:12:0:0,0,0	1/1:7,0:6:5.05:40,5,0	./.	./.	./.	0/0:17,0:16:0:0,0,0	1/1:17,0:12:2.87:27,3,0	0/1:24,0:15:45.47:45,0,351	1/1:21,0:20:8.07:37,8,0	0/1:27,0:21:40.14:185,0,40	./.	1/1:27,0:25:2.08:8,2,0	0/0:14,0:11:2.92:0,3,17	0/0:15,1:16:2.04:0,2,6	0/1:27,1:24:0:0,0,0	1/1:15,1:14:3.41:19,3,0	0/1:16,1:14:9.11:38,0,9	0/0:11,0:10:14.76:0,15,239	0/1:14,0:5:12.28:12,0,37	0/0:18,1:16:3.01:0,3,46	0/1:36,0:18:0.03:0,0,0	0/1:21,3:22:0:0,0,0	./.	./.	0/0:23,0:21:0:0,0,0	0/1:30,0:26:1.70:2,0,888	0/0:20,0:18:4.66:0,5,254	0/0:11,0:5:3.05:0,3,19
chr10	7057564	.	G	GTC	45.39	PASS	AB=0.986;AC=9;AF=0.196;AN=46;BaseQRankSum=1.017;DP=697;FS=6.928;HRun=0;HaplotypeScore=151.6557;InbreedingCoeff=0.0610;MQ=25.72;MQ0=193;MQRankSum=-0.294;QD=0.31;ReadPosRankSum=-1.941;VQSLOD=2.0834;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:14:0:0,0,0	0/1:8,0:7:4.97:5,0,101	./.	./.	0/0:26,0:21:0.94:0,1,1	0/0:21,0:19:0.74:0,1,1	1/1:20,1:16:2.88:45,3,0	0/1:28,1:18:22.10:22,0,372	0/0:30,0:29:14.52:0,15,225	0/0:31,1:26:10.63:0,11,514	./.	0/0:34,0:32:3.46:0,3,19	0/0:26,0:24:8.82:0,9,97	0/0:19,1:20:2.91:0,3,45	0/0:31,0:28:0.94:0,1,2	0/1:23,0:21:36.95:38,0,37	0/0:18,2:15:2.84:0,3,14	0/1:13,1:13:11.91:12,0,49	0/1:18,0:7:25.69:26,0,123	0/0:20,0:18:0.94:0,1,2	0/0:47,2:18:1.72:0,2,5	0/0:20,2:21:0.81:0,1,2	./.	./.	0/1:22,0:21:0.02:0,0,0	0/0:34,0:30:68.20:0,68,471	0/0:22,0:20:16.23:0,16,86	0/1:11,0:7:2.99:3,0,28
chr10	7057570	.	A	ATG	1029.97	PASS	AB=0.867;AC=7;AF=0.152;AN=46;BaseQRankSum=1.087;DP=728;FS=5.647;HRun=0;HaplotypeScore=160.5762;InbreedingCoeff=0.2018;MQ=25.97;MQ0=198;MQRankSum=-2.229;QD=6.64;ReadPosRankSum=3.956;VQSLOD=2.9586;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:13:0:0,0,0	0/0:8,0:7:8.87:0,9,74	./.	./.	0/0:26,0:21:0.94:0,1,1	0/0:21,0:19:0.74:0,1,1	1/1:23,0:18:3.01:48,3,0	0/0:28,0:18:39.34:0,39,490	0/0:36,0:33:14.41:0,14,194	0/0:33,0:28:1.90:0,2,501	0/0:13,0:13:0.94:0,1,1	0/0:36,0:34:6.25:0,6,32	0/0:26,0:25:8.83:0,9,86	0/0:22,0:22:5.38:0,5,43	0/0:34,0:31:0.94:0,1,1	0/1:29,0:27:23.88:24,0,37	./.	0/0:15,0:13:8.47:0,8,89	0/1:20,0:11:20.31:20,0,196	0/0:21,0:19:0.94:0,1,2	0/0:47,0:15:0.47:0,0,1	0/0:25,0:24:0.70:0,1,2	./.	./.	0/0:24,0:23:0.45:0,0,1	0/1:20,15:33:99:791,0,119	0/1:9,12:19:0.81:248,0,1	0/0:8,3:7:5.52:0,6,56
chr10	7057600	.	ATGTCTGTCTG	A	1087.24	PASS	AB=1.000;AC=23;AF=0.479;AN=48;BaseQRankSum=10.168;DP=820;FS=12.950;HRun=0;HaplotypeScore=229.9271;InbreedingCoeff=0.4888;MQ=26.96;MQ0=209;MQRankSum=-2.422;QD=3.08;ReadPosRankSum=-4.493;VQSLOD=0.5519;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	0/0:10,0:9:7.82:0,8,176	./.	./.	1/1:26,0:24:5.10:13,5,0	1/1:17,0:16:2.49:7,2,0	0/0:33,0:24:8.55:0,9,161	0/0:40,0:27:75.23:0,75,1466	0/0:42,0:38:21.09:0,21,299	0/0:34,0:29:71.46:0,71,2089	1/1:14,0:14:2.49:6,2,0	0/1:39,0:39:10.19:10,0,54	0/0:28,0:28:14.96:0,15,363	0/0:29,0:28:1.20:0,1,88	1/1:43,0:43:4.10:10,4,0	0/1:35,0:33:17.88:18,0,134	0/0:22,0:12:6.02:0,6,108	0/0:18,0:12:9.39:0,9,369	0/0:20,0:10:24.08:0,24,697	0/1:29,0:28:5.72:6,0,81	0/0:52,0:10:1.72:0,2,4	1/1:29,0:29:6.31:17,6,0	1/1:32,0:31:3.31:8,3,0	./.	1/1:25,0:25:2.48:6,2,0	1/1:30,3:31:24.36:700,24,0	1/1:15,8:22:20.32:398,20,0	1/1:4,2:6:10.56:47,11,0
chr10	7057602	.	GTCTGTC	G	1883.78	PASS	AB=0.806;AC=20;AF=0.417;AN=48;BaseQRankSum=9.066;DP=829;FS=6.165;HRun=0;HaplotypeScore=221.9298;InbreedingCoeff=0.5105;MQ=27.12;MQ0=206;MQRankSum=-3.650;QD=6.75;ReadPosRankSum=-3.218;VQSLOD=1.7446;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:11,0:10:8.76:0,9,163	./.	./.	1/1:25,0:24:4.01:9,4,0	1/1:18,0:17:1.55:3,2,0	0/0:35,0:24:8.52:0,9,214	0/0:39,0:27:78.24:0,78,1881	0/0:43,0:39:19.98:0,20,333	0/0:34,0:29:84.13:0,84,2391	1/1:14,0:14:1.77:4,2,0	0/0:40,0:40:5.64:0,6,111	0/0:30,0:30:17.90:0,18,458	0/0:29,0:28:2.03:0,2,107	1/1:42,0:42:3.13:7,3,0	0/0:35,0:34:2.42:0,2,118	0/0:21,0:12:6.02:0,6,196	0/0:19,0:12:9.27:0,9,406	0/0:23,0:12:27.09:0,27,763	0/1:31,0:30:0.17:0,0,113	0/0:50,0:10:1.72:0,2,4	1/1:28,0:28:5.08:11,5,0	1/1:32,0:31:2.65:5,3,0	./.	1/1:25,0:25:2.01:4,2,0	0/1:12,19:31:39.78:1454,0,40	1/1:10,11:23:20.31:233,20,0	1/1:4,3:6:12.44:295,12,0
chr10	7057606	.	GTC	G	487.90	PASS	AB=1.000;AC=21;AF=0.457;AN=46;BaseQRankSum=9.730;DP=830;FS=11.205;HRun=0;HaplotypeScore=218.0116;InbreedingCoeff=0.5576;MQ=27.25;MQ0=203;MQRankSum=-2.499;QD=1.69;ReadPosRankSum=-1.239;VQSLOD=1.4964;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:13,0:11:10.01:0,10,127	./.	./.	1/1:27,0:26:1.89:5,2,0	1/1:18,0:17:0.92:2,1,0	0/0:36,0:25:14.55:0,15,200	0/0:41,0:28:79.40:0,79,1127	0/0:43,0:39:20.17:0,20,220	0/0:35,0:29:81.08:0,81,1343	1/1:13,0:13:0.94:2,1,0	0/1:41,0:41:13.28:13,0,50	0/0:30,0:30:18.03:0,18,245	0/0:29,0:28:2.81:0,3,50	1/1:40,0:40:1.41:3,1,0	0/0:34,0:33:4.31:0,4,74	0/0:21,0:12:6.02:0,6,103	0/0:18,0:11:11.41:0,11,221	0/0:23,0:12:30.10:0,30,496	0/0:32,0:31:3.68:0,4,55	./.	1/1:31,0:31:1.89:4,2,0	1/1:30,0:29:1.41:3,1,0	./.	1/1:27,0:27:0.21:1,0,0	1/1:30,2:29:13.46:409,13,0	1/1:21,3:23:18.16:113,18,0	1/1:6,0:6:12.52:70,13,0
chr10	7057634	.	ATG	A	2992.08	PASS	AB=0.556;AC=39;AF=0.848;AN=46;BaseQRankSum=-3.115;DP=833;FS=12.965;HRun=0;HaplotypeScore=204.6227;InbreedingCoeff=0.5193;MQ=29.26;MQ0=198;MQRankSum=1.684;QD=5.11;ReadPosRankSum=-2.641;VQSLOD=1.3609;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	1/1:1,12:11:6.49:78,6,0	./.	./.	1/1:2,26:27:4.89:37,5,0	1/1:4,18:20:0.94:2,1,0	1/1:6,24:21:15.52:194,16,0	1/1:16,27:31:72.22:898,72,0	0/1:8,32:32:7.78:68,0,8	1/1:10,23:27:60.14:739,60,0	1/1:2,14:16:0.94:2,1,0	1/1:6,32:34:4.32:41,4,0	1/1:2,33:34:21.06:269,21,0	1/1:6,27:32:3.48:39,3,0	1/1:3,39:42:4.42:37,4,0	1/1:2,30:31:3.82:41,4,0	1/1:3,18:11:9.03:115,9,0	1/1:3,16:10:12.04:154,12,0	1/1:10,11:14:27.03:326,27,0	1/1:6,27:31:8.85:77,9,0	./.	1/1:1,29:30:1.89:4,2,0	1/1:5,25:29:1.41:3,1,0	./.	1/1:3,23:26:0.37:1,0,0	0/0:39,1:35:49.78:0,50,1077	0/0:28,1:29:16.26:0,16,258	0/0:8,0:7:14.88:0,15,164
chr10	7058230	.	TC	T	574.40	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=2.515;DP=454;FS=13.877;HRun=2;HaplotypeScore=54.4218;InbreedingCoeff=0.7644;MQ=60.57;MQ0=12;MQRankSum=1.202;QD=10.44;ReadPosRankSum=-1.097;VQSLOD=-0.0523;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:66.98:0,67,651	0/0:4,0:4:9.03:0,9,107	0/0:19,0:6:1.39:0,1,26	0/1:12,0:9:10.41:10,0,80	0/0:16,0:15:38.18:0,38,300	0/0:21,0:20:48.71:0,49,411	0/0:22,0:22:49.51:0,50,429	0/0:22,0:20:44.60:0,45,345	0/0:19,0:18:34.33:0,34,289	0/0:17,0:17:41.71:0,42,353	0/0:10,0:10:23.93:0,24,237	0/0:14,0:14:31.08:0,31,290	0/0:12,0:12:28.71:0,29,241	0/0:12,0:12:35.80:0,36,288	0/0:12,0:12:26.81:0,27,264	0/0:12,0:12:20.93:0,21,192	0/0:36,0:34:73.36:0,73,713	0/0:16,0:16:35.42:0,35,315	0/0:21,0:19:53.98:0,54,537	0/0:11,0:11:25.51:0,26,255	0/0:25,0:25:46.39:0,46,380	0/0:11,0:11:14.90:0,15,122	0/0:8,0:8:17.98:0,18,177	0/0:16,0:16:35.86:0,36,332	0/0:11,0:11:23.98:0,24,230	1/1:11,3:14:39.71:322,40,0	1/1:15,2:16:33.25:258,33,0	1/1:12,0:11:19.13:129,19,0
chr10	7058315	.	TCTTC	T	8267.65	PASS	AB=0.929;AC=45;AF=0.804;AN=56;BaseQRankSum=3.437;DP=391;FS=12.269;HRun=0;HaplotypeScore=87.2520;InbreedingCoeff=0.8056;MQ=52.86;MQ0=1;MQRankSum=-3.423;QD=27.38;ReadPosRankSum=-0.632;VQSLOD=3.4845;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:66.09:0,66,988	1/1:1,2:3:8.96:104,9,0	0/0:16,0:9:17.78:0,18,365	0/0:19,0:7:12.01:0,12,212	1/1:10,2:12:26.95:322,27,0	1/1:14,3:17:45.15:724,45,0	1/1:10,4:14:33.11:547,33,0	1/1:13,4:15:9.62:408,10,0	1/1:14,3:16:28.07:491,28,0	1/1:10,2:12:27.09:428,27,0	1/1:6,0:6:5.95:64,6,0	1/1:10,2:12:21.07:350,21,0	1/1:14,0:14:27.07:420,27,0	1/1:18,1:20:36.04:533,36,0	1/1:7,2:9:27.02:371,27,0	1/1:11,0:11:30.10:472,30,0	1/1:16,3:19:30.10:489,30,0	1/1:8,0:8:12.01:164,12,0	1/1:7,6:13:21.06:311,21,0	1/1:7,5:12:20.92:237,21,0	1/1:17,5:22:26.77:326,27,0	1/1:10,5:15:30.06:439,30,0	1/1:7,5:12:30.03:415,30,0	1/1:2,9:11:12.04:193,12,0	1/1:10,3:13:27.09:432,27,0	0/1:12,1:13:29.06:29,0,408	0/0:8,0:8:9.03:0,9,167	0/0:12,0:12:24.08:0,24,467
chr10	7058330	.	TC	T	2008.61	PASS	AB=0.823;AC=32;AF=0.571;AN=56;BaseQRankSum=5.068;DP=365;FS=7.776;HRun=2;HaplotypeScore=92.0072;InbreedingCoeff=-0.1038;MQ=49.64;MQ0=4;MQRankSum=-3.260;QD=6.81;ReadPosRankSum=4.255;VQSLOD=0.7788;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:69.16:0,69,945	1/1:2,1:3:8.89:73,9,0	0/1:13,0:8:6.56:7,0,207	0/0:15,0:5:1.45:0,1,159	1/1:9,3:12:0.20:153,0,0	1/1:9,6:15:34.86:182,35,0	0/1:12,4:16:63.01:72,0,63	0/1:14,4:16:99:121,0,145	0/1:12,4:15:36.16:109,0,36	0/1:12,2:13:39.14:91,0,39	0/1:6,2:8:3.60:4,0,68	0/1:7,3:10:28.65:77,0,29	1/1:3,6:9:15.37:128,15,0	1/1:11,7:18:5.52:132,6,0	0/1:11,3:14:91.91:130,0,92	1/1:5,7:12:9.29:165,9,0	1/1:12,5:17:0.20:107,0,0	0/1:7,2:9:30.06:59,0,30	0/1:11,1:8:20.06:103,0,20	0/1:6,3:9:42.44:99,0,42	0/1:20,2:22:93.52:94,0,112	0/1:7,3:12:3.21:25,0,3	0/1:8,5:13:41.55:42,0,75	1/1:10,1:11:10.83:57,11,0	1/1:4,8:12:22.78:149,23,0	0/0:8,0:8:12.68:0,13,300	0/0:3,0:3:9.03:0,9,132	0/0:9,0:8:24.08:0,24,354
chr10	7058334	.	TCTTCCTC	T	4675.82	PASS	AB=0.898;AC=40;AF=0.714;AN=56;BaseQRankSum=6.198;DP=348;FS=11.450;HRun=0;HaplotypeScore=111.2113;InbreedingCoeff=0.5462;MQ=49.60;MQ0=4;MQRankSum=-1.924;QD=16.82;ReadPosRankSum=1.646;VQSLOD=3.5023;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:56.57:0,57,708	1/1:2,1:3:2.85:60,3,0	0/0:12,0:7:18.95:0,19,362	0/0:12,0:4:6.23:0,6,165	1/1:7,3:10:16.65:122,17,0	1/1:9,6:15:41.69:359,42,0	1/1:15,3:18:39.93:208,40,0	0/1:18,0:16:71.89:72,0,176	1/1:13,4:16:31.99:320,32,0	1/1:11,2:12:29.60:228,30,0	1/1:5,2:8:11.04:39,11,0	1/1:7,3:10:25.20:244,25,0	1/1:2,6:8:23.75:400,24,0	1/1:8,6:15:34.23:378,34,0	1/1:10,3:13:28.58:225,29,0	1/1:4,7:11:31.95:455,32,0	1/1:13,5:18:30.93:355,31,0	1/1:8,2:10:19.45:225,19,0	0/1:11,1:8:22.86:85,0,23	0/1:6,3:9:6.64:70,0,7	0/1:20,2:23:38.30:38,0,87	1/1:8,3:11:7.32:101,7,0	1/1:9,4:13:4.14:167,4,0	1/1:10,1:11:14.11:146,14,0	1/1:4,8:12:23.18:378,23,0	0/0:8,0:8:12.46:0,12,383	0/0:2,0:2:5.74:0,6,38	0/0:7,0:6:18.01:0,18,302
chr10	7058817	.	A	AT	3479.41	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-1.918;DP=436;FS=6.363;HRun=2;HaplotypeScore=54.9496;InbreedingCoeff=0.7847;MQ=82.61;MQ0=3;MQRankSum=0.585;QD=11.56;ReadPosRankSum=2.778;VQSLOD=1.9807;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:92.72:0,93,739	1/1:5,0:5:8.95:78,9,0	0/0:32,0:14:5.11:0,5,137	0/0:29,0:18:4.52:0,5,132	1/1:12,0:12:29.67:227,30,0	1/1:0,14:14:6.02:71,6,0	1/1:6,10:16:14.53:136,15,0	1/1:19,0:19:35.57:311,36,0	1/1:3,11:14:8.96:98,9,0	1/1:2,14:16:38.93:345,39,0	1/1:8,0:8:11.89:93,12,0	1/1:5,13:18:6.47:38,6,0	1/1:4,7:11:5.89:78,6,0	1/1:10,0:10:17.96:154,18,0	1/1:6,6:12:11.56:102,12,0	1/1:13,0:13:26.93:242,27,0	1/1:25,1:26:59.16:521,59,0	1/1:6,13:19:11.25:84,11,0	1/1:4,11:16:15.70:265,16,0	1/1:16,0:15:26.35:199,26,0	1/1:11,0:11:20.44:155,20,0	1/1:7,0:7:14.80:118,15,0	1/1:14,1:15:9.83:65,10,0	1/1:6,2:8:3.01:39,3,0	1/1:6,9:15:11.04:61,11,0	0/0:15,0:15:38.91:0,39,328	0/0:18,0:18:41.89:0,42,351	0/0:6,0:6:15:0,15,130
chr10	7058819	.	T	TTA	3036.63	PASS	AB=1.000;AC=42;AF=0.750;AN=56;BaseQRankSum=-1.423;DP=474;FS=3.914;HRun=0;HaplotypeScore=82.0348;InbreedingCoeff=0.5951;MQ=78.85;MQ0=5;MQRankSum=0.232;QD=9.46;ReadPosRankSum=3.815;VQSLOD=3.1981;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,99,764	1/1:5,0:5:8.95:78,9,0	0/0:33,0:14:4.87:0,5,143	0/0:27,0:16:14.67:0,15,144	1/1:11,0:11:30.14:248,30,0	1/1:17,0:17:5.93:44,6,0	1/1:18,0:19:9.58:105,10,0	1/1:3,13:21:36.75:327,37,0	1/1:14,0:14:10.56:94,11,0	1/1:15,1:16:33.79:319,34,0	1/1:8,0:9:5.60:100,6,0	1/1:17,0:17:0.88:25,1,0	1/1:11,1:12:6.01:65,6,0	1/1:12,0:12:7.78:155,8,0	1/1:11,1:12:5.73:95,6,0	1/1:11,0:11:26.93:242,27,0	1/1:24,1:28:40.74:461,41,0	0/1:22,0:24:12.76:73,0,13	0/1:13,0:14:18.53:186,0,19	1/1:13,2:15:24.23:186,24,0	1/1:8,0:8:19.97:151,20,0	1/1:6,0:7:14.04:111,14,0	1/1:2,13:16:8.69:80,9,0	1/1:6,6:14:3.01:39,3,0	1/1:17,0:18:7.47:34,7,0	0/0:18,0:19:22.86:0,23,321	0/0:21,0:23:40.51:0,41,364	0/0:6,0:7:14.79:0,15,137
chr10	7059152	.	T	TCACTCA	18890.02	PASS	AB=0.798;AC=44;AF=0.786;AN=56;BaseQRankSum=-4.474;DP=736;FS=13.998;HRun=0;HaplotypeScore=182.9071;InbreedingCoeff=0.6738;MQ=62.63;MQ0=4;MQRankSum=-11.564;QD=32.02;ReadPosRankSum=2.695;VQSLOD=3.7771;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,99,1976	1/1:2,7:11:21.07:694,21,0	0/0:34,0:26:41.59:0,42,666	0/0:43,0:31:21.30:0,21,430	1/1:5,12:18:3.01:99,3,0	1/1:9,18:29:39.21:1290,39,0	1/1:14,20:36:33.11:1086,33,0	1/1:16,21:40:72.15:1223,72,0	1/1:6,25:35:39.13:1288,39,0	1/1:7,18:27:57.11:1589,57,0	0/1:7,10:17:54.89:189,0,55	1/1:9,20:29:39.13:1284,39,0	1/1:5,23:31:45.15:1486,45,0	1/1:4,18:22:48.16:1565,48,0	1/1:8,10:19:24.08:790,24,0	1/1:2,16:18:36.12:1190,36,0	1/1:9,18:30:33.11:1091,33,0	1/1:6,9:16:9.03:298,9,0	1/1:4,19:24:55.06:1297,55,0	1/1:3,16:19:12.04:397,12,0	1/1:27,14:46:9.03:236,9,0	1/1:3,18:23:18.06:570,18,0	1/1:8,15:24:6.02:198,6,0	1/1:14,9:25:6.96:200,7,0	1/1:5,14:23:24.08:792,24,0	0/1:27,1:28:36.03:36,0,970	0/0:28,0:28:60.17:0,60,1099	0/0:3,0:3:6.02:0,6,127
chr10	7059524	.	T	TA	8018.63	PASS	AB=0.606;AC=43;AF=0.768;AN=56;BaseQRankSum=-10.923;DP=536;FS=3.075;HRun=11;HaplotypeScore=63.6602;InbreedingCoeff=0.8889;MQ=72.12;MQ0=0;MQRankSum=-1.143;QD=19.46;ReadPosRankSum=-1.041;VQSLOD=5.6098;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,1:50:90.87:0,91,868	1/1:3,5:8:15.03:152,15,0	0/0:9,0:9:23.28:0,23,168	0/0:12,0:12:14.78:0,15,115	1/1:5,23:28:23.80:553,24,0	1/1:2,16:18:15.84:342,16,0	1/1:0,12:15:38.58:347,39,0	0/1:7,13:20:1.24:336,0,1	1/1:3,17:20:36.07:365,36,0	1/1:5,10:15:33.03:318,33,0	1/1:7,15:22:9.73:248,10,0	1/1:1,13:14:36.06:361,36,0	1/1:0,17:17:39.08:396,39,0	1/1:4,16:20:36.07:366,36,0	1/1:3,21:24:24.86:434,25,0	1/1:3,15:18:45.09:457,45,0	1/1:3,25:28:63.13:640,63,0	1/1:6,7:13:21.04:213,21,0	1/1:4,18:22:53.04:496,53,0	1/1:3,15:19:35.82:325,36,0	1/1:2,9:11:24.04:238,24,0	1/1:3,15:18:37.28:357,37,0	1/1:2,13:15:29.89:304,30,0	1/1:7,18:25:21.84:397,22,0	1/1:5,17:22:18.85:372,19,0	0/0:1,0:29:50.20:0,50,146	0/0:1,0:19:32.59:0,33,94	0/0:3,0:5:4.07:0,4,12
chr10	7060849	.	C	CT	51.15	PASS	AB=0.748;AC=6;AF=0.111;AN=54;BaseQRankSum=7.421;DP=261;FS=24.362;HRun=0;HaplotypeScore=47.3788;InbreedingCoeff=0.1355;MQ=44.70;MQ0=10;MQRankSum=-5.894;QD=1.31;ReadPosRankSum=1.371;VQSLOD=0.1076;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:18:45.11:0,45,628	0/1:2,2:4:15.19:15,0,71	./.	0/0:3,0:1:2.22:0,2,7	0/0:8,2:10:13.02:0,13,206	0/0:9,1:10:8.02:0,8,277	0/0:18,1:17:26.91:0,27,473	0/0:6,0:6:15.03:0,15,180	0/0:9,0:9:18.05:0,18,234	0/1:6,6:10:86.86:87,0,126	0/0:4,3:7:9.95:0,10,94	0/0:8,0:8:24.07:0,24,317	0/0:8,0:8:18.06:0,18,251	0/0:11,0:11:27.09:0,27,377	0/0:4,0:4:12.04:0,12,166	0/0:4,0:4:12.03:0,12,151	0/0:22,0:22:54.16:0,54,730	0/0:14,0:13:36.10:0,36,484	0/0:16,0:15:36.07:0,36,471	1/1:3,2:5:5.81:47,6,0	0/0:12,0:11:21.04:0,21,294	0/0:5,3:8:12.04:0,12,167	0/0:3,2:5:4.43:0,4,81	0/0:15,0:15:36.12:0,36,503	0/1:9,3:12:9.52:10,0,225	0/1:5,1:5:2.97:3,0,139	0/0:6,2:7:3.21:0,3,178	0/0:3,0:2:5.99:0,6,63
chr10	7060891	.	G	GAA	2412.02	PASS	AB=0.856;AC=49;AF=0.875;AN=56;BaseQRankSum=-1.769;DP=419;FS=0.834;HRun=15;HaplotypeScore=61.5276;InbreedingCoeff=0.2956;MQ=53.69;MQ0=24;MQRankSum=-2.288;QD=6.79;ReadPosRankSum=-0.549;VQSLOD=-0.2572;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:36:4.58:0,5,211	1/1:2,1:6:7.75:55,8,0	0/1:19,0:3:5.41:5,0,9	0/0:26,0:13:8.67:0,9,104	0/1:10,5:14:1.45:190,0,1	1/1:9,6:16:9.28:87,9,0	1/1:7,7:14:7.75:55,8,0	1/1:17,10:28:33.71:312,34,0	1/1:8,5:13:3.01:39,3,0	1/1:8,0:10:14.34:107,14,0	1/1:5,8:14:17.14:109,17,0	1/1:9,0:9:9.67:74,10,0	1/1:4,6:11:5.38:47,5,0	1/1:11,0:11:16.96:156,17,0	1/1:7,0:7:8.13:51,8,0	1/1:2,6:8:3.01:38,3,0	1/1:17,13:31:12.20:95,12,0	1/1:11,8:19:4.51:48,5,0	1/1:13,1:17:16.38:164,16,0	1/1:6,5:11:20.66:152,21,0	1/1:5,1:8:8.37:70,8,0	1/1:3,5:8:13.37:90,13,0	0/1:7,2:9:8.70:95,0,9	1/1:5,16:21:10.39:97,10,0	1/1:6,7:12:3.01:38,3,0	1/1:11,0:10:23.83:182,24,0	1/1:13,0:11:18.25:131,18,0	1/1:6,0:4:5.99:51,6,0
chr10	7060895	.	A	AAAG	763.88	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=1.580;DP=419;FS=17.276;HRun=0;HaplotypeScore=75.4557;InbreedingCoeff=0.6865;MQ=56.65;MQ0=24;MQRankSum=-1.413;QD=13.89;ReadPosRankSum=1.229;VQSLOD=1.9832;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:35:84.27:0,84,915	0/0:7,0:7:10.13:0,10,62	0/0:23,0:5:9.21:0,9,87	0/0:26,0:14:17.34:0,17,217	0/0:15,0:14:22.53:0,23,176	0/0:16,0:16:25.92:0,26,179	0/0:16,0:14:16.40:0,16,107	0/0:29,0:29:21.56:0,22,261	0/0:12,0:12:19.06:0,19,124	0/0:10,0:10:21.40:0,21,125	0/0:12,0:12:12.64:0,13,97	0/0:9,0:9:9.78:0,10,71	0/0:9,0:9:9.79:0,10,62	0/0:10,0:10:13.67:0,14,83	0/0:7,0:7:12.68:0,13,83	0/0:7,0:7:3.85:0,4,22	0/0:30,0:30:3.83:0,4,172	0/0:21,0:20:33.77:0,34,227	0/0:18,0:17:20.20:0,20,173	0/0:11,0:10:15.63:0,16,113	0/0:8,0:7:10.15:0,10,67	0/0:9,0:9:17.11:0,17,102	0/0:10,0:10:9.75:0,10,86	0/1:20,0:20:2.40:4,0,2	0/0:11,0:10:10.46:0,10,63	1/1:7,7:13:18.25:392,18,0	1/1:8,5:11:32.40:391,32,0	1/1:2,4:6:6.02:111,6,0
chr10	7062950	.	AAC	A	190.54	PASS	AB=0.705;AC=3;AF=0.060;AN=50;BaseQRankSum=0.044;DP=538;FS=2.901;HRun=0;HaplotypeScore=116.7639;InbreedingCoeff=0.1187;MQ=61.94;MQ0=4;MQRankSum=2.840;QD=3.40;ReadPosRankSum=0.445;VQSLOD=2.7486;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:25,18:43:59.79:263,0,60	0/0:12,0:11:2.84:0,3,21	./.	./.	0/0:21,0:22:6.47:0,6,53	0/0:14,0:14:2.92:0,3,18	0/0:19,0:19:1.04:0,1,2	0/0:19,0:18:9.37:0,9,61	0/0:14,0:14:12:0,12,111	0/0:14,0:13:17.96:0,18,182	0/0:11,0:12:9.01:0,9,93	0/0:24,0:23:4.64:0,5,51	0/0:17,0:16:6.02:0,6,72	1/1:13,0:13:0.68:2,1,0	0/0:16,0:15:8.98:0,9,91	0/0:18,0:20:18.02:0,18,177	0/0:26,0:25:15.98:0,16,189	0/0:19,0:19:17.15:0,17,187	0/0:23,0:17:12.85:0,13,112	0/0:19,0:19:9:0,9,78	0/0:12,0:12:2.97:0,3,27	0/0:27,0:27:6:0,6,52	0/0:12,0:12:6.01:0,6,66	0/0:22,0:22:6.46:0,6,51	0/0:26,0:28:10.08:0,10,145	0/0:17,0:17:33.07:0,33,423	0/0:19,0:19:33.04:0,33,411	./.
chr10	7062998	.	C	CT	8111.64	PASS	AB=0.955;AC=45;AF=0.804;AN=56;BaseQRankSum=-9.074;DP=538;FS=1.636;HRun=8;HaplotypeScore=96.4738;InbreedingCoeff=0.8972;MQ=57.98;MQ0=19;MQRankSum=-1.505;QD=19.41;ReadPosRankSum=-1.490;VQSLOD=3.9920;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:34:67.68:0,68,579	1/1:0,7:7:20.93:209,21,0	0/0:26,0:10:16.55:0,17,111	0/0:29,0:8:8.65:0,9,57	1/1:7,16:23:30.38:311,30,0	1/1:3,16:19:45.50:501,45,0	1/1:4,16:20:38.99:416,39,0	1/1:3,10:12:30.07:333,30,0	1/1:3,9:11:24.07:277,24,0	1/1:5,17:22:51.13:576,51,0	1/1:2,8:10:22:235,22,0	1/1:7,8:15:11.87:124,12,0	1/1:3,8:11:17.73:196,18,0	1/1:1,13:14:23.92:262,24,0	1/1:8,16:24:35.98:372,36,0	1/1:6,19:26:47.36:488,47,0	1/1:4,19:22:48.14:553,48,0	1/1:1,18:19:45.05:500,45,0	1/1:4,17:19:48.08:526,48,0	1/1:5,12:16:29.46:344,29,0	1/1:8,10:18:24.97:264,25,0	1/1:4,19:23:44.62:444,45,0	1/1:6,12:18:27.13:278,27,0	1/1:4,13:17:32.73:366,33,0	1/1:5,19:24:54.08:535,54,0	0/1:5,1:21:1.56:2,0,64	0/0:2,0:25:40.74:0,41,120	0/0:0,0:5:10.19:0,10,30
chr10	7063005	.	T	TA	1035.72	PASS	AB=0.986;AC=25;AF=0.446;AN=56;BaseQRankSum=-0.605;DP=519;FS=2.188;HRun=0;HaplotypeScore=107.4077;InbreedingCoeff=-0.3310;MQ=65.04;MQ0=8;MQRankSum=0.643;QD=2.68;ReadPosRankSum=10.895;VQSLOD=1.4941;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:69.98:0,70,384	1/1:7,0:7:9.77:40,10,0	0/0:31,0:15:26.15:0,26,297	0/0:25,0:11:14.96:0,15,149	0/1:20,0:20:33.90:34,0,85	0/1:22,1:23:88.60:89,0,110	1/1:19,0:19:11.27:86,11,0	0/1:12,0:12:6.47:45,0,6	0/1:11,0:10:4.03:47,0,4	0/1:19,0:19:18.24:75,0,18	0/1:11,0:11:19.26:19,0,42	0/1:12,0:11:5.42:5,0,47	1/1:11,0:11:10.79:60,11,0	0/1:14,0:14:22.66:40,0,23	0/1:21,2:23:40.83:41,0,60	0/1:26,0:26:52.65:53,0,71	0/1:23,0:23:44.26:93,0,44	0/1:20,0:20:10.28:111,0,10	0/1:21,0:20:41.74:105,0,42	0/1:17,0:17:42.82:43,0,85	0/1:18,0:18:18.83:19,0,110	0/1:20,1:21:16.07:55,0,16	0/1:15,2:17:36.09:36,0,53	0/1:16,0:16:23.27:50,0,23	0/1:25,0:25:57.16:57,0,85	0/0:18,0:18:36.66:0,37,216	0/0:24,0:24:59.73:0,60,304	0/0:6,0:6:17.20:0,17,96
chr10	7063947	.	T	TG	24578.30	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=1.483;DP=653;FS=1.759;HRun=1;HaplotypeScore=99.7199;InbreedingCoeff=0.9867;MQ=87.29;MQ0=0;MQRankSum=-12.033;QD=41.31;ReadPosRankSum=6.138;VQSLOD=4.4817;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,43:43:99:1843,123,0	1/1:0,6:6:15.05:225,15,0	0/0:26,0:26:72.23:0,72,929	0/0:32,0:32:87.24:0,87,1079	1/1:0,9:9:27.09:405,27,0	1/1:0,20:20:60.20:899,60,0	1/1:1,35:36:99:1529,102,0	1/1:1,34:35:99:1424,99,0	1/1:1,27:28:78.26:1169,78,0	1/1:2,18:20:60.20:872,60,0	1/1:0,10:10:30.10:450,30,0	1/1:0,25:25:72.24:1079,72,0	1/1:1,17:18:54.18:802,54,0	1/1:0,28:28:78.26:1169,78,0	1/1:3,24:27:72.24:1079,72,0	1/1:2,19:21:54.18:810,54,0	1/1:0,29:29:84.28:1259,84,0	1/1:0,17:17:45.15:674,45,0	1/1:2,19:21:54.16:787,54,0	1/1:1,10:11:30.06:425,30,0	1/1:0,58:58:99:2337,156,0	1/1:2,14:16:42.14:629,42,0	1/1:2,13:15:39.13:584,39,0	1/1:2,34:36:96.33:1439,96,0	1/1:1,15:16:42.14:624,42,0	1/1:0,28:28:84.28:1256,84,0	1/1:0,15:15:36.12:539,36,0	1/1:0,7:7:18.06:270,18,0
chr10	7064606	.	TTTATTATTATTATTA	T	7566.02	PASS	AB=0.765;AC=39;AF=0.780;AN=50;BaseQRankSum=6.541;DP=229;FS=4.351;HRun=0;HaplotypeScore=101.6198;InbreedingCoeff=0.5269;MQ=69.45;MQ0=1;MQRankSum=-5.218;QD=45.04;ReadPosRankSum=0.476;VQSLOD=4.3066;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:12:18.06:0,18,389	1/1:0,4:4:9.03:378,9,0	0/0:9,0:8:2.43:0,2,62	./.	1/1:3,3:5:9.03:308,9,0	1/1:4,13:17:36.12:1512,36,0	1/1:1,4:5:9.03:378,9,0	1/1:20,0:20:3.01:61,3,0	1/1:4,6:10:15.05:630,15,0	1/1:2,5:7:15.04:487,15,0	1/1:0,4:4:9.03:378,9,0	1/1:3,3:6:9.03:378,9,0	1/1:1,2:3:6.02:252,6,0	1/1:3,0:3:3.01:59,3,0	1/1:1,1:2:3.01:126,3,0	1/1:4,3:7:3.01:126,3,0	1/1:5,8:13:15.05:630,15,0	0/1:9,4:13:99:243,0,158	1/1:17,7:24:21.07:645,21,0	1/1:2,1:3:3.01:126,3,0	1/1:7,2:9:3.01:126,3,0	./.	1/1:3,2:5:3.01:126,3,0	./.	1/1:1,6:7:15.05:599,15,0	0/0:7,0:7:9.03:0,9,472	0/0:15,0:15:27.09:0,27,1567	0/0:12,0:12:33.11:0,33,1849
chr10	7067677	.	G	GA	4363.96	PASS	AB=0.773;AC=24;AF=0.429;AN=56;BaseQRankSum=-8.740;DP=562;FS=0.796;HRun=11;HaplotypeScore=60.9923;InbreedingCoeff=0.6904;MQ=56.35;MQ0=16;MQRankSum=0.706;QD=15.00;ReadPosRankSum=1.132;VQSLOD=5.2599;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,28:34:45.74:631,46,0	0/0:8,0:7:17.93:0,18,139	0/0:9,0:5:14.30:0,14,98	0/1:11,0:7:14.23:14,0,21	0/0:19,0:19:41.83:0,42,325	1/1:5,8:13:6.79:241,7,0	0/1:10,16:25:0.50:352,0,0	0/0:18,0:19:20.66:0,21,264	1/1:9,9:17:30.02:294,30,0	0/0:24,0:24:58.07:0,58,445	0/0:21,0:22:52.56:0,53,394	0/1:14,3:15:22.03:22,0,215	0/0:23,0:24:24.24:0,24,283	0/0:17,0:17:33.34:0,33,256	0/0:13,1:14:2.40:0,2,202	1/1:4,10:15:29.73:272,30,0	1/1:7,27:33:71.98:715,72,0	0/0:32,1:31:66.72:0,67,493	1/1:7,14:20:21.69:386,22,0	1/1:6,13:19:30.06:305,30,0	0/0:24,0:23:15.30:0,15,335	0/0:16,0:16:41.80:0,42,319	0/0:20,0:19:41.02:0,41,307	0/0:16,0:17:36.93:0,37,267	1/1:5,17:23:32.41:344,32,0	0/1:9,14:23:4.45:306,0,4	1/1:3,10:14:3.90:221,4,0	1/1:12,8:20:8.54:263,9,0
chr10	7068267	.	AAC	A	3739.53	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=7.413;DP=559;FS=3.976;HRun=0;HaplotypeScore=112.5532;InbreedingCoeff=0.9920;MQ=69.17;MQ0=4;MQRankSum=-0.846;QD=25.10;ReadPosRankSum=0.947;VQSLOD=4.7435;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:72.12:0,72,1095	0/0:15,0:15:39.08:0,39,541	0/0:49,0:23:35.24:0,35,548	0/0:26,0:20:36:0,36,508	0/0:16,0:16:45.11:0,45,640	1/1:16,0:16:36.07:362,36,0	1/1:14,0:14:21.04:242,21,0	0/0:31,0:31:90.23:0,90,1305	1/1:23,2:25:68.98:748,69,0	0/0:27,0:27:75.16:0,75,1073	0/0:27,0:27:77.57:0,78,1102	0/0:18,0:18:51.14:0,51,764	0/0:11,0:11:24.05:0,24,329	0/0:10,0:10:27.08:0,27,415	0/0:22,0:22:63.17:0,63,981	1/1:7,0:7:15.03:164,15,0	1/1:20,0:20:48.03:469,48,0	0/0:26,0:26:69.17:0,69,1084	1/1:13,1:14:42.08:453,42,0	1/1:24,1:25:68.05:694,68,0	0/0:6,0:6:18.03:0,18,235	0/0:22,0:22:63.16:0,63,919	0/0:17,0:17:48.13:0,48,700	0/0:16,0:16:44.91:0,45,604	1/1:28,0:28:59.93:608,60,0	0/0:24,0:24:69.20:0,69,1068	0/0:17,0:17:51.16:0,51,813	0/0:6,0:6:15:0,15,192
chr10	7068269	.	CA	C	4571.21	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-2.538;DP=551;FS=2.182;HRun=3;HaplotypeScore=98.1259;InbreedingCoeff=0.9634;MQ=68.24;MQ0=4;MQRankSum=0.554;QD=30.89;ReadPosRankSum=0.628;VQSLOD=4.4672;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:69.58:0,70,831	0/0:15,0:15:39.05:0,39,405	0/0:48,1:21:6.95:0,7,409	0/0:25,1:20:7.11:0,7,320	0/0:16,0:16:44.81:0,45,452	1/1:0,15:15:36.12:492,36,0	1/1:0,14:14:23.68:256,24,0	0/0:30,0:30:89.37:0,89,1026	1/1:7,18:25:74.82:885,75,0	0/0:25,0:25:70.90:0,71,768	0/0:26,0:26:70.57:0,71,770	0/0:17,0:17:51.10:0,51,561	0/0:11,0:11:23.53:0,24,234	0/0:10,0:10:26.67:0,27,294	0/0:21,0:21:63.12:0,63,727	1/1:0,7:7:15.02:186,15,0	1/1:0,20:20:48.15:639,48,0	0/0:24,0:24:69.12:0,69,789	1/1:1,13:14:41.95:465,42,0	1/1:2,23:25:71.90:856,72,0	0/0:6,0:6:17.97:0,18,182	0/0:22,0:22:62.69:0,63,644	0/0:17,0:17:48.06:0,48,509	0/0:16,0:16:44.89:0,45,471	1/1:1,27:28:60.19:793,60,0	0/0:23,0:23:68.48:0,68,769	0/0:17,0:17:51.12:0,51,596	0/0:7,0:7:14.39:0,14,137
chr10	7068279	.	C	CA	11130.61	PASS	AB=1.000;AC=52;AF=0.929;AN=56;BaseQRankSum=-3.789;DP=569;FS=3.136;HRun=7;HaplotypeScore=81.4455;InbreedingCoeff=0.5556;MQ=70.20;MQ0=4;MQRankSum=-2.173;QD=20.27;ReadPosRankSum=2.615;VQSLOD=4.6341;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:51.03:0,51,475	1/1:1,13:14:32.97:370,33,0	0/1:55,0:24:3.20:3,0,203	0/1:27,0:18:29.67:30,0,67	1/1:1,17:18:45.05:500,45,0	1/1:17,0:17:44.68:337,45,0	1/1:11,0:11:20.88:173,21,0	1/1:8,19:28:57.47:576,57,0	1/1:22,0:22:61.90:472,62,0	1/1:2,29:31:83.88:901,84,0	1/1:3,24:27:69.13:787,69,0	1/1:2,14:16:39.12:463,39,0	1/1:1,9:10:21.06:249,21,0	1/1:0,14:14:27.08:321,27,0	1/1:2,18:20:48.94:602,49,0	1/1:8,0:8:17.88:134,18,0	1/1:25,0:25:65.71:534,66,0	1/1:3,21:24:40.11:655,40,0	1/1:12,0:12:29.81:227,30,0	1/1:29,0:29:73.92:586,74,0	1/1:0,8:8:12.04:142,12,0	1/1:2,21:23:51.11:590,51,0	1/1:2,16:18:36.11:428,36,0	1/1:4,12:16:24.07:285,24,0	1/1:27,0:27:60.87:452,61,0	1/1:2,22:24:62.40:709,62,0	1/1:4,15:19:39.12:462,39,0	1/1:0,6:6:12.04:142,12,0
chr10	7068570	.	G	GCACACACACACACACACACACA	16612.54	PASS	AB=1.000;AC=46;AF=0.852;AN=54;BaseQRankSum=-3.244;DP=609;FS=4.387;HRun=0;HaplotypeScore=332.6313;InbreedingCoeff=0.2414;MQ=43.14;MQ0=6;MQRankSum=-1.292;QD=31.34;ReadPosRankSum=1.646;VQSLOD=2.8402;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:32:11.95:468,12,0	1/1:19,0:17:15.05:955,15,0	0/0:35,0:10:3.01:0,3,61	0/0:26,0:17:13.38:0,13,322	./.	1/1:19,1:20:6.02:520,6,0	1/1:20,0:20:9.03:274,9,0	1/1:38,0:34:54.12:1815,54,0	1/1:17,2:19:12.04:835,12,0	1/1:25,0:24:30.06:1206,30,0	1/1:14,0:14:9.03:640,9,0	1/1:17,0:17:9.03:726,9,0	1/1:14,0:14:3.01:296,3,0	1/1:25,0:25:6.02:302,6,0	1/1:27,0:27:5.04:313,5,0	1/1:18,0:21:18.02:1130,18,0	1/1:21,0:19:33.07:2313,33,0	1/1:12,0:12:15:493,15,0	1/1:25,0:25:38.80:1497,39,0	1/1:16,1:18:9.02:837,9,0	1/1:15,0:15:2.99:24,3,0	1/1:30,0:29:4.72:318,5,0	1/1:21,0:20:2.01:298,2,0	0/1:18,0:17:0.09:0,0,0	1/1:8,4:14:6.02:494,6,0	0/1:25,0:25:5.23:556,0,5	0/1:23,0:23:32.58:53,0,33	0/1:14,0:14:69.01:250,0,69
chr10	7068595	.	C	CTCACACACACACACACACAT	8476.91	PASS	AB=0.892;AC=38;AF=0.704;AN=54;BaseQRankSum=2.793;DP=492;FS=5.927;HRun=0;HaplotypeScore=215.5683;InbreedingCoeff=0.0835;MQ=63.16;MQ0=4;MQRankSum=-1.210;QD=21.03;ReadPosRankSum=3.066;VQSLOD=2.8255;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:26:99:278,0,229	1/1:12,0:12:23.82:306,24,0	0/0:29,0:16:42.05:0,42,516	0/0:29,0:20:45.98:0,46,812	./.	0/1:14,0:14:99:184,0,234	0/1:17,0:19:87.81:88,0,248	1/1:32,0:32:67.39:1162,67,0	0/1:10,0:10:99:370,0,105	1/1:22,0:22:38.59:450,39,0	1/1:1,0:16:11.96:725,12,0	1/1:1,0:12:9.03:786,9,0	1/1:0,0:9:2.27:249,2,0	1/1:13,0:13:14.91:122,15,0	1/1:0,0:15:3.01:275,3,0	0/0:14,0:14:29.47:0,29,278	0/1:19,0:18:99:571,0,345	1/1:14,0:14:18.14:689,18,0	0/1:16,0:16:66.45:66,0,360	0/1:9,0:9:99:428,0,116	1/1:13,0:13:14.79:112,15,0	1/1:23,0:23:22.87:192,23,0	1/1:1,0:13:2.75:255,3,0	0/1:1,0:22:0:0,0,0	0/1:14,0:14:99:125,0,224	1/1:0,0:23:43.43:579,43,0	1/1:1,0:20:6.74:159,7,0	0/1:0,0:17:29.06:304,0,29
chr10	7069548	.	TTAGATAGATAGA	T	4531.84	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-1.796;DP=694;FS=1.152;HRun=0;HaplotypeScore=244.8683;InbreedingCoeff=0.9171;MQ=64.01;MQ0=2;MQRankSum=-8.492;QD=23.98;ReadPosRankSum=1.144;VQSLOD=3.6688;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:66.70:0,67,3109	0/0:14,0:14:18.06:0,18,337	0/0:22,0:18:8.76:0,9,108	0/0:17,0:16:5.82:0,6,37	0/0:23,0:23:42.14:0,42,1741	1/1:6,14:20:18.06:476,18,0	1/1:11,7:18:9.03:252,9,0	0/0:43,0:43:42.13:0,42,1158	1/1:9,15:24:27.08:761,27,0	0/0:36,0:36:69.22:0,69,2744	0/0:17,0:17:33.11:0,33,1162	0/0:16,0:16:30.08:0,30,996	0/0:31,0:31:45.15:0,45,1747	0/0:33,0:33:36.10:0,36,1164	0/0:31,0:31:33.11:0,33,571	1/1:6,17:23:21.07:556,21,0	1/1:11,12:23:9.03:311,9,0	0/0:15,0:15:14.97:0,15,230	1/1:13,9:22:27.09:750,27,0	1/1:17,15:32:33.08:768,33,0	0/0:34,0:34:36.10:0,36,1420	0/0:27,0:27:42.13:0,42,1709	0/0:19,0:19:30.09:0,30,1202	0/0:27,0:27:39.13:0,39,1923	1/1:9,18:27:27.09:659,27,0	0/0:25,0:25:54.16:0,54,1474	0/0:34,0:33:24.08:0,24,586	0/0:8,0:7:3.01:0,3,135
chr10	7069589	.	T	TAGATAGAC	8971.06	PASS	AB=0.536;AC=30;AF=0.536;AN=56;BaseQRankSum=-1.584;DP=727;FS=4.463;HRun=0;HaplotypeScore=181.1272;InbreedingCoeff=0.6216;MQ=65.91;MQ0=2;MQRankSum=0.896;QD=19.85;ReadPosRankSum=5.133;VQSLOD=3.3208;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:80.97:0,81,1511	1/1:1,11:13:11.72:408,12,0	0/0:24,0:19:56.69:0,57,501	0/0:19,0:13:27:0,27,284	0/1:2,0:27:30.73:345,0,31	0/0:24,0:24:12.53:0,13,234	0/0:19,0:18:16.97:0,17,241	1/1:40,0:39:37.85:763,38,0	0/0:32,0:32:62.02:0,62,595	1/1:3,0:36:65.84:913,66,0	1/1:2,0:27:18.02:182,18,0	0/1:1,0:20:3.92:184,0,4	1/1:3,0:32:10.81:300,11,0	1/1:0,0:27:27.07:312,27,0	1/1:0,28:32:33.11:1447,33,0	0/0:24,0:24:1.51:0,2,291	0/0:23,0:22:29.90:0,30,314	1/1:2,7:10:3.01:132,3,0	0/0:21,0:21:17.60:0,18,409	0/0:32,0:32:46.05:0,46,494	0/1:9,0:35:99:104,0,121	1/1:3,0:30:32.90:428,33,0	1/1:3,0:24:5.32:275,5,0	0/1:4,0:29:37.66:286,0,38	0/0:23,0:23:26.76:0,27,236	1/1:3,20:31:81.52:1832,82,0	1/1:1,22:32:23.06:928,23,0	1/1:0,5:6:3.01:132,3,0
chr10	7071269	.	CATAAATAAATAA	C	720.95	PASS	AB=1.000;AC=11;AF=0.289;AN=38;BaseQRankSum=2.358;DP=293;FS=0.000;HRun=0;HaplotypeScore=99.7986;InbreedingCoeff=0.3574;MQ=66.41;MQ0=1;MQRankSum=-4.007;QD=8.79;ReadPosRankSum=0.237;VQSLOD=1.8275;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:9,7:16:3.01:102,3,0	./.	./.	./.	0/0:11,0:13:6.02:0,6,148	1/1:2,7:9:3.01:102,3,0	./.	./.	./.	./.	0/0:8,0:10:9.03:0,9,197	0/0:9,0:12:9.03:0,9,230	0/0:4,0:4:9.03:0,9,523	0/0:1,0:3:6.02:0,6,153	0/0:10,0:10:6.02:0,6,174	1/1:7,2:9:2.09:199,2,0	1/1:13,5:18:3.01:102,3,0	0/0:9,0:17:21.05:0,21,495	1/1:20,4:24:9.03:299,9,0	./.	0/0:4,0:6:6.02:0,6,153	./.	0/0:6,0:6:3.01:0,3,174	0/0:8,0:8:3.01:0,3,174	0/0:12,0:20:5.40:0,5,125	0/0:10,0:10:1.10:0,1,26	0/0:8,0:13:1.71:0,2,61	0/1:6,0:6:36.08:36,0,70
chr10	7071573	.	G	GGC	621.32	PASS	AB=0.634;AC=13;AF=0.241;AN=54;BaseQRankSum=3.276;DP=434;FS=0.000;HRun=0;HaplotypeScore=88.6892;InbreedingCoeff=-0.2804;MQ=82.12;MQ0=0;MQRankSum=-0.752;QD=3.36;ReadPosRankSum=0.847;VQSLOD=2.1472;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:40:99:0,105,955	./.	0/0:13,0:13:27.09:0,27,430	0/0:12,0:12:20.74:0,21,218	0/1:6,0:6:16.45:16,0,34	0/0:20,0:20:34.92:0,35,795	0/0:30,0:30:87.17:0,87,1216	0/1:7,0:18:31.30:31,0,132	0/0:21,0:21:63.20:0,63,979	0/1:4,0:10:23.87:70,0,24	0/1:5,0:8:12.98:32,0,13	0/1:1,1:15:27.72:34,0,28	0/1:3,0:12:6.31:6,0,73	0/1:3,0:11:20.30:20,0,48	0/1:9,0:21:56.14:150,0,56	0/0:17,0:17:48.16:0,48,752	0/0:26,0:27:81.18:0,81,1191	0/1:8,0:20:33.92:198,0,34	0/0:19,0:19:34.95:0,35,697	0/0:4,0:4:12.03:0,12,170	0/1:13,0:31:99:156,0,167	0/1:3,0:8:15.35:15,0,20	0/1:1,0:4:0.63:1,0,20	0/1:2,0:21:13.65:37,0,14	0/0:8,0:8:21.07:0,21,339	0/0:0,0:9:11.08:0,11,32	0/0:1,0:18:22.19:0,22,78	0/0:5,0:11:18.72:0,19,74
chr10	7074626	.	T	TACACAC	5440.96	PASS	AB=0.920;AC=49;AF=0.942;AN=52;BaseQRankSum=-2.817;DP=545;FS=1.877;HRun=0;HaplotypeScore=135.4496;InbreedingCoeff=-0.0934;MQ=59.90;MQ0=9;MQRankSum=-0.091;QD=10.84;ReadPosRankSum=2.018;VQSLOD=4.1250;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:34,0:32:2.99:24,3,0	0/1:11,0:10:12.69:69,0,13	./.	./.	1/1:13,0:13:3.47:28,3,0	1/1:14,0:14:9.03:200,9,0	1/1:21,5:30:3.07:74,3,0	1/1:16,0:15:8.46:83,8,0	1/1:11,3:20:3.47:97,3,0	1/1:16,0:16:3.95:13,4,0	1/1:14,0:14:7.58:128,8,0	0/1:21,0:21:2.99:184,0,3	1/1:22,0:22:20.57:266,21,0	1/1:24,0:24:27.17:439,27,0	1/1:24,0:24:36.27:427,36,0	0/1:13,2:18:0.39:184,0,0	1/1:12,1:21:8.59:170,9,0	1/1:16,0:14:20.08:241,20,0	1/1:19,0:18:20.85:416,21,0	1/1:9,4:13:5.38:132,5,0	1/1:42,0:39:10.76:466,11,0	1/1:16,0:16:12.80:178,13,0	1/1:11,0:11:13.57:209,14,0	1/1:22,0:22:21.93:324,22,0	1/1:8,3:16:3.01:39,3,0	1/1:21,0:20:12.87:447,13,0	1/1:13,0:13:12.04:221,12,0	1/1:12,0:12:19.31:384,19,0
chr10	7074667	.	AT	A	1569.62	PASS	AB=0.889;AC=33;AF=0.589;AN=56;BaseQRankSum=9.408;DP=569;FS=9.432;HRun=1;HaplotypeScore=111.9930;InbreedingCoeff=0.8609;MQ=60.51;MQ0=6;MQRankSum=0.599;QD=4.62;ReadPosRankSum=0.798;VQSLOD=-0.2643;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:25:42.01:0,42,651	1/1:4,2:6:8.42:45,8,0	0/0:25,0:17:51.15:0,51,765	0/0:32,0:18:54.12:0,54,788	1/1:21,0:24:12.45:52,12,0	0/0:13,1:14:13.02:0,13,373	0/0:22,0:22:25.08:0,25,340	1/1:29,0:27:13.01:133,13,0	0/0:18,0:18:30.08:0,30,454	1/1:9,0:9:21.48:76,21,0	1/1:11,2:15:19.63:70,20,0	1/1:18,0:18:28.82:91,29,0	0/1:21,1:24:8.28:57,0,8	1/1:18,3:22:21.75:123,22,0	1/1:29,4:35:55.78:222,56,0	0/0:9,0:9:12.02:0,12,145	0/0:23,0:23:42.37:0,42,599	1/1:13,2:15:12.91:79,13,0	0/0:30,1:29:31.41:0,31,1028	0/0:13,0:13:30.67:0,31,416	1/1:44,2:45:74.16:281,74,0	1/1:15,1:18:29.25:105,29,0	1/1:12,1:13:21.12:86,21,0	1/1:23,1:24:28.54:127,29,0	0/0:16,0:16:26.70:0,27,407	1/1:21,1:22:4.17:131,4,0	1/1:10,1:11:4.31:49,4,0	1/1:5,2:7:12.28:60,12,0
chr10	7074669	.	C	CACA	3535.68	PASS	AB=0.957;AC=35;AF=0.625;AN=56;BaseQRankSum=7.687;DP=561;FS=7.355;HRun=0;HaplotypeScore=136.8145;InbreedingCoeff=0.7310;MQ=60.93;MQ0=5;MQRankSum=1.936;QD=9.21;ReadPosRankSum=1.590;VQSLOD=2.8464;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:25:53.62:0,54,826	1/1:5,2:7:8.22:109,8,0	0/0:25,0:17:39.17:0,39,833	0/0:32,0:18:48.07:0,48,870	1/1:23,0:23:4.39:47,4,0	0/1:14,1:15:9.88:10,0,503	0/0:18,0:18:24.47:0,24,403	1/1:30,0:27:41.35:240,41,0	0/0:18,0:18:29.74:0,30,515	1/1:9,0:9:21.33:144,21,0	1/1:13,1:15:13.83:107,14,0	1/1:18,0:18:30.52:206,31,0	0/1:25,1:26:8.90:93,0,9	1/1:22,3:25:37.87:351,38,0	1/1:29,4:33:61.17:485,61,0	0/0:9,0:9:12.86:0,13,148	0/0:20,0:20:41.90:0,42,693	1/1:13,2:15:18.07:176,18,0	0/1:31,1:30:39.69:40,0,1136	0/0:13,0:13:32.58:0,33,500	1/1:41,2:43:67.55:485,68,0	1/1:17,1:18:28.89:200,29,0	1/1:11,1:12:20.74:176,21,0	1/1:23,1:24:23.55:197,24,0	0/0:16,0:16:30.09:0,30,506	1/1:19,1:20:33.25:170,33,0	1/1:11,1:12:5.15:107,5,0	1/1:5,2:7:18.51:193,19,0
chr10	7076271	.	G	GT	5204.25	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-13.485;DP=662;FS=4.571;HRun=8;HaplotypeScore=61.0785;InbreedingCoeff=0.9991;MQ=76.24;MQ0=0;MQRankSum=-1.506;QD=28.75;ReadPosRankSum=0.583;VQSLOD=5.2077;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,105,953	0/0:15,0:15:36.01:0,36,330	0/0:15,0:15:23.92:0,24,212	0/0:13,0:13:28.55:0,29,247	0/0:23,0:23:57:0,57,522	1/1:3,18:21:54.13:610,54,0	1/1:4,18:22:23.75:527,24,0	0/0:31,0:30:77.90:0,78,694	1/1:2,13:15:36.11:415,36,0	0/0:33,0:33:93.03:0,93,849	0/0:23,0:23:66.04:0,66,604	0/0:27,0:27:72.02:0,72,655	0/0:21,0:21:51.02:0,51,467	0/0:25,0:25:75.01:0,75,676	0/0:20,0:20:57.03:0,57,522	1/1:4,20:24:63.18:719,63,0	1/1:2,29:31:75.22:865,75,0	0/0:15,0:15:36.01:0,36,329	1/1:3,18:21:54.14:612,54,0	1/1:2,26:28:78.15:867,78,0	0/0:17,0:17:45:0,45,407	0/0:23,0:23:63.03:0,63,577	0/0:32,0:32:90.03:0,90,819	0/0:35,0:35:70.23:0,70,776	1/1:2,17:19:51.15:589,51,0	0/0:26,0:26:66:0,66,600	0/0:33,0:33:99:0,99,906	0/0:18,0:18:54.03:0,54,494
chr10	7077155	.	AGT	A	5717.69	PASS	AB=0.773;AC=33;AF=0.589;AN=56;BaseQRankSum=10.732;DP=858;FS=62.432;HRun=0;HaplotypeScore=203.8000;InbreedingCoeff=0.9040;MQ=47.48;MQ0=18;MQRankSum=-9.262;QD=14.59;ReadPosRankSum=0.573;VQSLOD=2.6865;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:42:90.29:0,90,1470	1/1:2,4:6:6.01:76,6,0	0/0:45,0:18:30.56:0,31,429	0/0:64,0:26:45.58:0,46,600	1/1:5,17:21:30.07:382,30,0	0/0:36,0:36:78.26:0,78,1295	0/0:53,1:58:43.86:0,44,1444	1/1:11,15:25:29.11:477,29,0	0/0:45,0:46:96.39:0,96,1506	1/1:9,22:27:72.18:885,72,0	1/1:3,8:10:18.05:216,18,0	1/1:6,16:20:42.08:502,42,0	1/1:10,22:31:54.14:670,54,0	1/1:11,20:30:42.09:512,42,0	1/1:7,20:23:30.09:371,30,0	0/0:46,0:49:99:0,105,1668	0/0:42,0:39:66.51:0,67,1355	1/1:6,4:10:16.12:167,16,0	0/0:33,0:23:51.16:0,51,817	0/0:23,0:22:46.04:0,46,708	1/1:22,14:35:13.24:208,13,0	1/1:12,14:26:30.08:380,30,0	1/1:11,9:20:27.07:324,27,0	1/1:16,8:20:9.02:114,9,0	0/0:20,0:20:51.17:0,51,840	0/1:24,2:31:4.25:226,0,4	1/1:9,0:24:9.21:149,9,0	1/1:2,0:5:11.36:56,11,0
chr10	7077167	.	TGA	T	1896.54	PASS	AB=0.988;AC=24;AF=0.429;AN=56;BaseQRankSum=9.526;DP=862;FS=30.303;HRun=0;HaplotypeScore=262.5675;InbreedingCoeff=0.5775;MQ=42.40;MQ0=30;MQRankSum=-5.427;QD=5.25;ReadPosRankSum=-2.019;VQSLOD=1.7511;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:41:89.92:0,90,1613	1/1:7,0:6:5.89:37,6,0	0/0:38,0:9:16.74:0,17,275	0/0:60,0:16:25.23:0,25,380	1/1:21,0:21:28.76:173,29,0	0/0:36,0:35:78.20:0,78,1410	0/0:57,0:54:80.53:0,81,1721	0/1:31,0:28:99:134,0,142	0/0:48,1:48:97.66:0,98,1841	0/1:37,0:35:76.96:217,0,77	1/1:15,0:13:2.93:87,3,0	1/1:19,0:17:35.15:227,35,0	1/1:28,0:26:49.86:318,50,0	1/1:27,0:26:38.96:257,39,0	1/1:28,0:23:28.88:176,29,0	0/0:57,0:55:99:0,114,1924	0/0:41,2:39:56.94:0,57,1585	0/1:12,0:10:36.69:37,0,56	0/0:34,0:23:66.09:0,66,1031	0/0:27,0:24:51.46:0,51,792	0/1:41,0:36:0.50:72,0,1	1/1:26,0:25:28.21:178,28,0	1/1:16,0:16:23.27:142,23,0	0/1:22,1:19:3.49:36,0,3	0/0:25,0:25:57.15:0,57,1000	0/1:29,1:27:7.08:7,0,160	0/0:25,1:25:21.89:0,22,100	0/0:5,0:5:6.73:0,7,18
chr10	7077175	.	AGT	A	4481.27	PASS	AB=0.763;AC=26;AF=0.464;AN=56;BaseQRankSum=9.619;DP=844;FS=50.690;HRun=0;HaplotypeScore=260.7165;InbreedingCoeff=0.6777;MQ=40.59;MQ0=32;MQRankSum=-11.144;QD=13.10;ReadPosRankSum=-5.872;VQSLOD=2.1939;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:36:65.45:0,65,1108	1/1:2,5:6:8.96:99,9,0	0/0:33,0:3:6.02:0,6,104	0/0:65,1:11:9.76:0,10,117	1/1:11,10:21:20.89:251,21,0	0/0:36,0:32:69.18:0,69,1151	0/0:62,0:59:80.79:0,81,1423	0/1:15,15:27:43.70:463,0,44	0/0:51,0:48:99:0,108,1780	1/1:12,22:32:25.27:873,25,0	1/1:1,14:13:17.42:238,17,0	1/1:4,14:17:36.07:477,36,0	1/1:5,22:25:39.12:518,39,0	1/1:4,22:25:39.13:506,39,0	1/1:9,19:24:20.98:264,21,0	0/0:57,0:53:99:0,102,1735	0/0:42,0:38:51.42:0,51,1456	0/1:5,5:8:64.94:65,0,84	0/0:34,0:25:66.13:0,66,1041	0/0:23,0:19:33.40:0,33,545	0/1:30,12:34:3.12:122,0,3	1/1:6,19:23:23.03:317,23,0	1/1:4,8:12:12:159,12,0	1/1:6,10:14:5.75:79,6,0	0/0:28,0:28:48.11:0,48,788	0/1:29,2:28:50.07:50,0,861	0/0:24,1:24:13.47:0,13,606	0/0:5,0:5:12:0,12,161
chr10	7077191	.	AAT	A	2714.68	PASS	AB=0.967;AC=29;AF=0.518;AN=56;BaseQRankSum=10.342;DP=815;FS=65.906;HRun=0;HaplotypeScore=291.5416;InbreedingCoeff=0.4296;MQ=38.25;MQ0=32;MQRankSum=-10.015;QD=5.85;ReadPosRankSum=-2.130;VQSLOD=0.6952;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:35,0:33:41.82:222,0,42	1/1:9,0:8:14.49:95,14,0	0/0:22,0:2:5.98:0,6,48	0/1:56,0:4:1.60:2,0,16	0/1:17,0:17:0:0,0,1	0/0:35,0:29:74.62:0,75,1176	0/0:57,0:55:65.23:0,65,1352	1/1:35,1:31:21.41:430,21,0	0/0:51,0:43:98.71:0,99,1743	1/1:32,1:31:24.21:506,24,0	0/1:18,0:16:8.19:47,0,8	1/1:20,0:19:29.31:196,29,0	1/1:29,0:27:21.10:326,21,0	1/1:24,0:24:23.28:154,23,0	1/1:24,0:21:9.23:142,9,0	0/0:54,0:47:99:0,122,2104	0/0:40,0:35:15.55:0,16,1534	0/1:10,0:8:4.41:44,0,4	0/0:40,0:27:81.01:0,81,1407	0/0:25,0:19:39.09:0,39,469	0/1:32,9:34:4.97:58,0,5	0/1:25,1:25:3.76:72,0,4	1/1:10,2:12:8.52:53,9,0	1/1:14,2:15:4.75:39,5,0	0/0:26,0:23:30.96:0,31,645	0/1:26,0:26:24.27:273,0,24	0/1:24,0:23:31.96:205,0,32	1/1:3,0:3:5.93:41,6,0
chr10	7077192	.	ATG	A	6680.52	PASS	AB=0.757;AC=35;AF=0.648;AN=54;BaseQRankSum=6.479;DP=817;FS=44.257;HRun=0;HaplotypeScore=281.0091;InbreedingCoeff=0.7948;MQ=38.06;MQ0=34;MQRankSum=-9.725;QD=14.37;ReadPosRankSum=-4.312;VQSLOD=2.7215;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:12,24:33:57.14:720,57,0	1/1:1,8:8:15.03:191,15,0	./.	0/1:55,0:4:0.32:0,0,35	0/1:7,11:18:0.08:0,0,0	0/0:35,0:29:63.02:0,63,957	0/0:58,0:55:71.54:0,72,1083	1/1:7,31:31:84.21:1045,84,0	0/0:49,0:41:89.95:0,90,1472	1/1:6,27:31:78.25:1014,78,0	1/1:4,14:16:8.70:109,9,0	1/1:3,17:19:30.08:376,30,0	1/1:5,24:27:54.16:689,54,0	1/1:6,18:24:27.05:313,27,0	1/1:5,19:21:29.68:343,30,0	0/0:54,0:47:99:0,117,1876	0/0:41,0:36:45.56:0,46,1270	0/1:5,5:8:38.46:101,0,38	0/0:43,0:29:72.19:0,72,1124	0/0:24,0:18:27.41:0,27,382	1/1:26,13:34:18.42:147,18,0	1/1:8,21:27:14.86:177,15,0	1/1:5,7:12:8.96:106,9,0	1/1:6,10:14:5.56:75,6,0	0/0:26,0:23:35.08:0,35,540	1/1:6,19:25:33.20:657,33,0	1/1:5,19:23:42.71:537,43,0	1/1:0,3:3:6.02:79,6,0
chr10	7077233	.	T	TGTGA	2683.19	PASS	AB=0.974;AC=12;AF=0.214;AN=56;BaseQRankSum=3.059;DP=869;FS=2.620;HRun=0;HaplotypeScore=397.9234;InbreedingCoeff=0.0508;MQ=32.06;MQ0=47;MQRankSum=-7.064;QD=8.31;ReadPosRankSum=2.322;VQSLOD=1.3114;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:44:65.30:0,65,1091	0/0:10,0:9:16.57:0,17,160	0/0:38,0:2:6.02:0,6,106	0/0:70,0:6:11.75:0,12,207	0/0:25,0:25:14.13:0,14,150	0/0:37,0:31:19.07:0,19,491	0/1:36,0:31:33.91:34,0,231	0/0:38,0:24:60.50:0,61,701	0/1:54,0:47:99:100,0,625	0/1:45,0:41:91.34:91,0,328	0/0:19,0:18:16.91:0,17,188	0/0:16,0:15:25.12:0,25,291	0/0:24,0:24:28.97:0,29,417	0/0:25,0:24:23.21:0,23,331	0/0:28,0:26:36.49:0,36,382	0/1:48,0:42:88.50:88,0,639	0/0:36,0:32:6.40:0,6,730	0/1:8,0:7:18.66:19,0,31	0/1:14,0:9:30.98:31,0,235	0/1:26,0:21:26.21:26,0,95	0/0:50,0:37:10.27:0,10,278	0/0:32,0:30:15.23:0,15,174	0/0:12,0:12:16.17:0,16,139	0/0:16,0:14:5.65:0,6,73	0/0:24,0:19:6.50:0,7,270	0/1:34,11:44:74.07:1031,0,74	1/1:24,10:32:25.74:1069,26,0	1/1:10,2:11:3.89:349,4,0
chr10	7077234	.	G	GAA	1485.40	PASS	AB=0.876;AC=17;AF=0.304;AN=56;BaseQRankSum=5.601;DP=893;FS=8.881;HRun=0;HaplotypeScore=405.2439;InbreedingCoeff=-0.4003;MQ=32.03;MQ0=47;MQRankSum=-7.404;QD=3.28;ReadPosRankSum=-0.845;VQSLOD=0.8238;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:45:68.50:0,68,1085	0/1:8,2:9:22.70:23,0,163	0/0:39,0:2:6.02:0,6,98	0/0:70,0:6:11.90:0,12,195	0/0:21,5:26:10.68:0,11,94	0/0:37,0:31:48.95:0,49,756	0/1:37,0:32:2.77:3,0,298	0/0:38,0:24:61.35:0,61,658	0/0:55,0:48:11.14:0,11,698	0/1:41,6:43:99:276,0,852	0/0:16,3:18:15.75:0,16,162	0/1:13,3:15:49.62:50,0,280	0/1:21,4:25:71.98:72,0,465	0/1:14,12:25:99:123,0,294	0/1:27,7:30:13.92:14,0,376	0/1:50,0:44:11.72:12,0,731	0/0:34,1:31:63.46:0,63,967	0/1:7,1:7:2.91:3,0,134	0/1:14,0:9:38.64:39,0,243	0/1:26,0:21:10.18:10,0,98	0/0:48,2:37:27.11:0,27,273	0/1:28,5:31:8.49:8,0,159	0/1:10,4:14:31.72:32,0,93	0/1:15,1:14:1.17:1,0,68	0/0:24,0:19:22.08:0,22,320	0/1:37,13:48:99:668,0,166	0/1:29,5:32:99:182,0,117	0/1:10,3:12:99:120,0,115
chr10	7077243	.	TGA	T	2226.12	PASS	AB=0.902;AC=10;AF=0.179;AN=56;BaseQRankSum=-1.832;DP=897;FS=8.642;HRun=0;HaplotypeScore=417.2677;InbreedingCoeff=-0.0245;MQ=34.86;MQ0=41;MQRankSum=0.780;QD=6.17;ReadPosRankSum=0.135;VQSLOD=1.3787;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,36:46:56.46:776,56,0	0/0:10,0:10:18.39:0,18,157	0/0:44,0:5:6.02:0,6,115	0/0:62,0:9:14.84:0,15,211	0/0:25,0:25:15.08:0,15,116	0/1:34,0:29:32.19:97,0,32	0/1:40,0:36:46.90:47,0,69	0/0:30,0:20:48.10:0,48,676	0/1:61,0:54:55.14:55,0,357	0/0:47,0:44:71.37:0,71,1107	0/0:22,0:21:16.87:0,17,101	0/0:17,0:15:32.13:0,32,299	0/0:24,0:24:43.77:0,44,452	0/0:24,0:23:42.91:0,43,290	0/0:32,0:29:48.18:0,48,390	0/1:52,0:46:12.89:13,0,343	0/0:31,0:28:4.09:0,4,369	0/0:9,0:8:22.47:0,22,272	0/0:17,0:10:11.39:0,11,252	0/1:24,0:20:58.41:113,0,58	0/0:54,0:42:27.92:0,28,231	0/0:29,0:27:18.68:0,19,147	0/0:18,0:18:19.52:0,20,138	0/0:19,0:16:9.80:0,10,51	0/0:21,0:16:1.27:0,1,113	0/1:29,23:48:99:788,0,480	0/1:26,10:35:99:324,0,359	0/1:9,5:13:58.85:162,0,59
chr10	7077245	.	A	AAT	1517.81	PASS	AB=0.925;AC=19;AF=0.339;AN=56;BaseQRankSum=-3.372;DP=882;FS=30.543;HRun=0;HaplotypeScore=413.2210;InbreedingCoeff=0.0002;MQ=35.06;MQ0=39;MQRankSum=0.610;QD=2.78;ReadPosRankSum=-4.133;VQSLOD=0.7935;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:42:52.76:0,53,266	0/1:8,0:8:4.44:4,0,81	0/0:42,0:6:6.02:0,6,89	0/0:61,0:10:14.78:0,15,203	0/0:24,0:25:2.07:0,2,54	1/1:26,8:30:34.38:216,34,0	1/1:36,3:35:17.56:105,18,0	0/1:29,0:19:48.85:49,0,478	0/1:48,11:54:99:239,0,192	0/1:45,0:43:23.78:24,0,481	0/1:21,0:20:1.47:1,0,12	0/0:18,0:16:16.32:0,16,108	0/0:23,0:23:33.52:0,34,194	0/0:24,0:23:27.60:0,28,201	0/0:32,0:29:24.72:0,25,187	0/1:42,12:48:49.53:404,0,50	0/1:22,4:25:99:245,0,191	0/0:9,0:8:8.90:0,9,99	0/1:14,3:10:75.25:75,0,235	0/1:18,5:20:30.83:101,0,31	0/1:49,3:41:11.57:12,0,69	0/0:27,0:25:5.85:0,6,53	0/0:18,0:18:9.69:0,10,95	0/1:17,2:16:0.36:1,0,0	1/1:18,1:16:18.58:170,19,0	0/1:47,1:51:14.12:14,0,461	0/1:31,0:35:23.20:23,0,296	0/0:8,0:11:19.99:0,20,162
chr10	7077246	.	GTGT	G	352.75	PASS	AB=0.929;AC=10;AF=0.179;AN=56;BaseQRankSum=2.242;DP=881;FS=15.941;HRun=0;HaplotypeScore=425.3067;InbreedingCoeff=-0.0226;MQ=35.19;MQ0=35;MQRankSum=-3.556;QD=1.62;ReadPosRankSum=-0.961;VQSLOD=0.6162;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:43:26.94:0,27,124	0/1:7,1:8:39.55:40,0,185	0/0:41,0:6:12.04:0,12,225	0/0:59,0:10:15.34:0,15,271	0/1:23,2:25:75.57:77,0,76	0/1:35,0:30:1.94:2,0,174	0/0:39,0:35:23.09:0,23,152	0/0:28,0:18:48.16:0,48,765	0/0:61,0:54:46.98:0,47,765	0/0:44,1:43:62.07:0,62,1692	0/0:21,0:20:7.15:0,7,38	0/0:17,0:16:17.87:0,18,248	0/0:24,0:24:37.53:0,38,660	0/0:25,0:24:36.19:0,36,442	0/0:33,0:30:26.79:0,27,328	0/0:54,0:48:39.01:0,39,637	0/0:28,0:25:42.70:0,43,650	0/1:8,1:8:28.70:29,0,285	0/0:18,0:11:32.56:0,33,513	0/1:24,0:20:7.50:7,0,114	0/1:44,9:41:92.48:183,0,92	0/1:26,1:25:45.59:46,0,93	0/1:16,2:18:75.85:76,0,123	1/1:16,3:16:5.91:32,6,0	0/0:21,0:16:1.54:0,2,177	0/0:56,0:51:81.21:0,81,1094	0/0:36,0:35:36.97:0,37,659	0/0:12,0:11:14.42:0,14,157
chr10	7077247	.	T	TGA	2735.11	PASS	AB=0.870;AC=15;AF=0.268;AN=56;BaseQRankSum=-3.695;DP=881;FS=21.199;HRun=0;HaplotypeScore=416.4482;InbreedingCoeff=-0.0675;MQ=36.34;MQ0=32;MQRankSum=1.458;QD=5.98;ReadPosRankSum=-4.404;VQSLOD=1.3773;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:43:38.20:0,38,260	0/0:8,0:8:2.07:0,2,128	0/0:41,0:7:8.06:0,8,92	0/0:59,0:12:15.03:0,15,207	0/1:25,0:25:1.10:1,0,41	1/1:20,15:30:31.26:743,31,0	0/1:16,21:35:1.13:174,0,1	0/0:28,0:18:41.47:0,41,369	0/1:49,13:55:99:515,0,171	0/0:45,0:43:99:0,100,1020	0/0:21,0:20:6.97:0,7,31	0/0:17,0:16:17.20:0,17,167	0/0:24,0:24:36.06:0,36,404	0/0:25,0:24:34.24:0,34,279	0/0:33,0:30:25.49:0,25,231	0/1:38,17:49:76.98:590,0,77	0/1:22,6:25:99:405,0,148	0/0:9,0:8:10.01:0,10,230	0/1:17,1:11:89.74:90,0,193	0/1:13,10:19:27.24:168,0,27	0/1:48,3:40:16.79:17,0,80	0/1:27,0:25:4.50:4,0,68	0/1:18,0:18:0.73:1,0,102	0/1:17,2:16:0.38:1,0,0	0/1:15,6:16:54.73:159,0,55	0/0:56,1:52:65.85:0,66,800	0/1:36,0:35:12.30:12,0,408	0/0:13,0:12:0.75:0,1,96
chr10	7077262	.	A	ATG	1068.85	PASS	AB=0.934;AC=16;AF=0.286;AN=56;BaseQRankSum=3.997;DP=848;FS=10.819;HRun=0;HaplotypeScore=388.3762;InbreedingCoeff=0.0697;MQ=40.32;MQ0=23;MQRankSum=-5.358;QD=3.50;ReadPosRankSum=2.994;VQSLOD=0.7466;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:45:72.18:0,72,969	0/1:5,2:7:48.78:126,0,49	0/0:44,0:8:14.99:0,15,195	0/0:48,0:15:32.59:0,33,325	1/1:23,6:29:0.82:117,1,0	0/0:36,0:31:73.39:0,73,858	0/0:38,0:34:46.76:0,47,544	0/0:21,0:13:30.07:0,30,377	0/0:58,0:51:80.74:0,81,1073	0/1:41,2:40:99:176,0,438	0/1:18,1:19:3.62:40,0,4	0/1:15,0:14:8.52:9,0,86	0/0:23,0:22:9.91:0,10,211	0/1:25,0:24:28.36:28,0,99	0/1:29,0:27:28.42:28,0,122	0/0:49,0:44:83.91:0,84,968	0/0:29,0:27:29.18:0,29,622	0/1:11,1:11:60.35:60,0,73	0/1:17,0:9:0.68:1,0,217	0/0:21,0:17:25.85:0,26,228	1/1:34,10:37:21.29:398,21,0	0/1:23,1:23:37.48:61,0,37	0/1:15,4:19:23.34:133,0,23	1/1:14,6:16:0.35:49,0,0	0/0:23,0:19:36.11:0,36,497	0/0:60,0:56:99:0,111,1712	0/0:32,0:32:26.02:0,26,572	0/0:13,0:13:33.04:0,33,400
chr10	7077266	.	GAGTGTA	G	450.49	PASS	AB=1.000;AC=16;AF=0.286;AN=56;BaseQRankSum=5.028;DP=875;FS=23.895;HRun=0;HaplotypeScore=415.8323;InbreedingCoeff=-0.2232;MQ=41.72;MQ0=22;MQRankSum=-2.871;QD=1.07;ReadPosRankSum=-2.205;VQSLOD=0.7324;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:46,3:48:81.19:0,81,2406	0/1:8,0:8:25.87:26,0,104	0/1:42,0:8:0.67:1,0,305	0/0:49,0:19:35.84:0,36,613	0/1:30,0:30:19.87:20,0,88	0/0:37,0:32:43.63:0,44,1541	0/1:39,0:35:6.94:7,0,905	0/0:22,0:13:28.32:0,28,253	0/0:61,0:54:34.90:0,35,1953	0/1:44,0:40:99:151,0,472	1/1:20,1:21:7.99:64,8,0	0/1:17,0:16:38.59:45,0,39	0/1:25,0:24:62.17:62,0,166	0/1:27,0:26:48.39:54,0,48	0/1:29,0:27:40.05:88,0,40	0/0:52,0:46:47.06:0,47,1888	0/1:30,0:28:5.89:6,0,1112	0/0:11,0:11:2.42:0,2,155	0/0:19,0:10:27.46:0,27,555	0/1:21,0:17:6.47:6,0,374	0/1:44,0:36:27:27,0,298	0/1:25,0:24:37.43:37,0,57	0/1:20,0:20:10.39:10,0,83	0/0:21,0:17:4.83:0,5,54	0/0:26,0:22:47.96:0,48,1086	0/0:60,0:55:99:0,140,2418	0/0:33,0:32:60.47:0,60,874	0/0:13,0:13:30.15:0,30,407
chr10	7077277	.	A	AGT	769.16	PASS	AB=0.883;AC=11;AF=0.204;AN=54;BaseQRankSum=5.032;DP=904;FS=3.914;HRun=0;HaplotypeScore=391.2378;InbreedingCoeff=-0.2512;MQ=43.72;MQ0=21;MQRankSum=-7.253;QD=2.26;ReadPosRankSum=4.501;VQSLOD=0.9669;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:89.54:0,90,1091	0/1:7,2:9:80.77:81,0,119	0/0:36,0:7:7.74:0,8,122	0/0:46,0:23:43.69:0,44,434	0/1:27,7:34:75.39:75,0,189	0/0:37,0:37:92.08:0,92,1070	0/0:45,0:40:46.15:0,46,558	./.	0/0:56,0:53:99:0,122,1426	0/1:36,4:37:93.85:94,0,665	0/0:17,1:18:18.06:0,18,192	0/0:18,0:17:16.46:0,16,237	0/0:23,0:21:23.13:0,23,243	0/0:28,0:26:42.09:0,42,336	0/0:27,0:25:47.24:0,47,329	0/0:52,0:49:99:0,102,1213	0/0:32,0:32:53.20:0,53,786	0/1:14,3:13:99:129,0,133	0/0:23,0:11:20.93:0,21,220	0/0:22,0:20:34.62:0,35,345	0/1:44,12:56:99:299,0,305	0/1:23,2:24:12.54:13,0,266	0/1:17,5:22:63.98:64,0,218	0/1:14,8:18:38.79:39,0,70	0/0:26,0:24:57.17:0,57,722	0/1:57,0:53:3.68:4,0,1066	0/1:35,0:35:60.89:61,0,478	0/1:18,0:18:54.25:54,0,304
chr10	7077282	.	G	GAA	710.75	PASS	AB=0.935;AC=9;AF=0.161;AN=56;BaseQRankSum=7.243;DP=922;FS=12.339;HRun=0;HaplotypeScore=388.7298;InbreedingCoeff=-0.0415;MQ=43.44;MQ0=25;MQRankSum=-8.196;QD=2.81;ReadPosRankSum=0.896;VQSLOD=0.6168;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:56:95.02:0,95,1553	0/1:12,0:12:4.61:5,0,214	0/0:38,0:8:14.50:0,15,205	0/0:49,0:23:37.95:0,38,633	0/1:36,0:36:5.38:5,0,321	0/0:42,0:40:93.65:0,94,1380	0/0:47,0:42:38.51:0,39,751	1/1:9,0:5:1.72:4,2,0	0/0:58,0:56:99:0,123,1866	0/0:37,0:33:25.96:0,26,1082	0/0:21,0:21:23.47:0,23,328	0/0:19,0:18:23.40:0,23,429	0/0:22,0:20:39.46:0,39,524	0/0:29,0:27:44.98:0,45,557	0/0:30,0:27:47.70:0,48,560	0/0:51,0:48:99:0,112,1700	0/0:34,0:33:79.52:0,80,1123	0/0:18,0:14:0.21:0,0,271	0/0:24,0:11:32.82:0,33,414	0/0:21,0:20:22.08:0,22,390	0/1:63,0:59:55.17:55,0,525	0/0:24,0:24:20.12:0,20,443	0/0:21,0:21:5.14:0,5,377	0/1:23,0:20:6.53:7,0,130	0/0:27,0:25:62.99:0,63,1002	0/1:53,5:53:99:251,0,1519	0/1:29,4:33:99:247,0,604	0/1:12,5:18:99:258,0,391
chr10	7077293	.	A	AGT	7112.84	PASS	AB=0.723;AC=22;AF=0.407;AN=54;BaseQRankSum=1.399;DP=936;FS=25.016;HRun=0;HaplotypeScore=342.5509;InbreedingCoeff=0.4181;MQ=42.22;MQ0=26;MQRankSum=-1.832;QD=16.17;ReadPosRankSum=-4.544;VQSLOD=3.2951;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:57:83.41:0,83,1110	0/1:5,7:12:15.85:263,0,16	0/0:34,0:8:17.28:0,17,183	0/0:52,1:21:14.36:0,14,380	1/1:14,23:38:9.55:419,10,0	0/0:38,0:37:95.16:0,95,1139	0/0:51,0:46:61.66:0,62,809	./.	0/0:59,0:59:97.09:0,97,1755	0/1:21,18:34:60.77:1093,0,61	1/1:8,12:20:29.77:434,30,0	1/1:3,14:17:30.95:487,31,0	1/1:16,11:25:51.08:756,51,0	1/1:6,23:27:41.72:617,42,0	1/1:9,23:29:42.78:679,43,0	0/0:48,0:47:98.86:0,99,1261	0/0:34,0:34:45.19:0,45,1047	0/1:12,8:16:52.68:426,0,53	0/1:23,1:11:21.79:22,0,272	0/0:17,0:16:35.80:0,36,435	0/1:21,56:75:99:519,0,102	1/1:13,10:23:24:633,24,0	0/1:7,16:23:5.76:503,0,6	0/1:10,14:22:4.01:192,0,4	0/0:25,0:25:46.23:0,46,818	0/0:53,0:50:99:0,114,1199	0/1:33,0:31:69.96:70,0,443	0/0:18,0:19:41.78:0,42,442
chr10	7077295	.	T	TGA	3979.96	PASS	AB=0.975;AC=20;AF=0.357;AN=56;BaseQRankSum=6.400;DP=953;FS=28.071;HRun=0;HaplotypeScore=357.3235;InbreedingCoeff=0.3007;MQ=43.06;MQ0=25;MQRankSum=-2.505;QD=9.45;ReadPosRankSum=-2.647;VQSLOD=2.2295;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:53,3:56:92.17:0,92,1346	0/1:11,1:12:54.82:125,0,55	0/0:36,0:8:17.52:0,18,216	0/0:51,0:21:9.52:0,10,499	0/1:40,1:41:9.21:190,0,9	0/0:37,0:36:91.57:0,92,1272	0/0:53,0:48:70.30:0,70,972	0/0:8,0:4:2.97:0,3,20	0/0:60,0:60:99:0,114,2056	0/1:38,2:35:99:619,0,157	1/1:18,3:21:27.60:219,28,0	1/1:18,0:17:31.83:290,32,0	1/1:24,3:25:30.36:494,30,0	1/1:28,0:26:38.49:354,38,0	1/1:31,2:30:40.81:452,41,0	0/0:48,0:47:99:0,104,1490	0/0:34,0:34:80.47:0,80,1238	0/1:20,0:16:76.12:209,0,76	0/0:26,0:12:4.17:0,4,367	0/0:18,0:17:35.54:0,36,474	0/1:76,1:75:99:282,0,216	1/1:21,1:22:0.80:293,1,0	0/1:22,1:23:34.02:283,0,34	0/1:25,0:22:20.10:105,0,20	0/0:26,0:26:62.69:0,63,963	0/0:57,0:53:99:0,106,1443	0/1:34,0:32:66.52:67,0,540	0/0:19,0:19:31.64:0,32,424
chr10	7077339	.	AGT	A	1645.23	PASS	AB=0.625;AC=5;AF=0.089;AN=56;BaseQRankSum=-3.477;DP=960;FS=11.125;HRun=0;HaplotypeScore=243.9682;InbreedingCoeff=0.7032;MQ=42.30;MQ0=62;MQRankSum=-3.358;QD=20.57;ReadPosRankSum=0.610;VQSLOD=2.3024;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:59,0:55:77.73:0,78,1323	0/0:11,1:11:14.96:0,15,211	0/0:45,0:6:9:0,9,116	0/0:59,0:7:14.67:0,15,241	0/0:34,0:34:29.85:0,30,519	0/0:34,0:31:75.24:0,75,1265	0/0:43,0:41:86.84:0,87,1454	0/0:40,0:22:34.99:0,35,856	0/0:55,0:53:99:0,111,1824	0/0:36,0:31:69.15:0,69,1055	0/0:24,0:24:19.60:0,20,458	0/0:20,0:18:32.81:0,33,556	0/0:27,0:24:42.61:0,43,687	0/0:18,0:17:15.05:0,15,260	0/0:23,0:21:7.15:0,7,206	0/0:35,0:33:65.89:0,66,1080	0/0:36,0:36:62.89:0,63,1461	0/0:20,0:16:33.11:0,33,533	0/0:32,0:16:39.04:0,39,599	0/0:18,0:17:45.14:0,45,737	0/0:85,0:74:36.93:0,37,554	0/0:35,0:33:37.89:0,38,632	0/0:23,0:23:18.06:0,18,312	0/0:31,0:28:15.05:0,15,260	0/0:34,0:33:86.48:0,86,1432	1/1:13,32:43:35.79:1059,36,0	1/1:4,16:19:15.91:390,16,0	0/1:6,9:15:24.80:324,0,25
chr10	7077369	.	AGTGTGAGT	A	2448.23	PASS	AB=1.000;AC=27;AF=0.482;AN=56;BaseQRankSum=6.040;DP=813;FS=4.094;HRun=0;HaplotypeScore=224.5899;InbreedingCoeff=0.6506;MQ=39.97;MQ0=60;MQRankSum=-2.652;QD=6.46;ReadPosRankSum=-0.404;VQSLOD=2.0669;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:45,0:40:99:194,0,126	1/1:15,1:15:12.50:123,12,0	0/0:27,0:1:2.50:0,2,9	0/0:55,0:2:5.75:0,6,49	1/1:26,2:27:2.68:39,3,0	0/0:34,0:31:44.34:0,44,1380	0/0:44,0:38:65.72:0,66,1917	0/1:29,0:10:30.43:34,0,30	0/0:52,0:50:79.83:0,80,1983	1/1:24,1:21:21.71:259,22,0	1/1:13,4:17:14.10:248,14,0	1/1:12,0:11:11.53:188,12,0	1/1:20,0:18:22.81:405,23,0	0/1:9,0:8:9.69:20,0,10	1/1:26,0:24:21.21:208,21,0	0/0:31,0:29:41.98:0,42,1018	0/0:40,0:40:80.86:0,81,2508	1/1:17,0:13:3.45:148,3,0	0/0:23,0:14:36.12:0,36,974	0/0:16,0:16:39.13:0,39,1046	1/1:61,0:48:6.02:114,6,0	1/1:28,5:30:26.73:392,27,0	1/1:12,4:16:9.03:191,9,0	1/1:19,6:22:6.01:87,6,0	0/0:30,0:29:53.38:0,53,1413	0/0:41,0:35:81.19:0,81,1737	0/0:21,0:19:33.41:0,33,736	0/0:20,0:18:10.11:0,10,707
chr10	7077375	.	A	AGT	2217.83	PASS	AB=0.956;AC=26;AF=0.464;AN=56;BaseQRankSum=5.925;DP=773;FS=14.095;HRun=0;HaplotypeScore=173.0414;InbreedingCoeff=0.5920;MQ=39.27;MQ0=61;MQRankSum=-2.538;QD=6.30;ReadPosRankSum=-2.287;VQSLOD=1.8057;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:41,0:38:11.85:12,0,288	1/1:11,2:12:13.52:151,14,0	0/0:24,0:1:2.50:0,2,9	0/0:46,0:2:5.75:0,6,49	1/1:26,2:27:3.01:40,3,0	0/0:28,0:26:44.95:0,45,558	0/0:46,0:39:65.93:0,66,878	0/1:24,0:7:32.27:32,0,35	0/0:51,0:49:87.03:0,87,1080	0/1:20,2:19:51.31:206,0,51	1/1:14,2:16:14.99:175,15,0	1/1:5,5:10:12.02:178,12,0	1/1:14,2:16:32.94:447,33,0	1/1:6,2:7:6.02:88,6,0	1/1:17,7:23:21.25:206,21,0	0/0:31,0:29:41.57:0,42,500	0/0:35,0:36:83.88:0,84,1101	0/1:17,2:15:38.96:200,0,39	0/0:27,0:14:36.08:0,36,458	0/0:17,0:17:39.13:0,39,516	1/1:51,5:42:6.20:105,6,0	1/1:27,3:28:26.71:368,27,0	1/1:13,3:15:9.03:140,9,0	1/1:21,1:20:5.99:73,6,0	0/0:32,0:31:53.99:0,54,665	0/0:43,0:36:84.15:0,84,1006	0/0:19,0:17:32.65:0,33,397	0/0:20,0:17:30.07:0,30,364
chr10	7077377	.	T	TGA	1000.34	PASS	AB=0.991;AC=23;AF=0.411;AN=56;BaseQRankSum=8.333;DP=768;FS=10.204;HRun=0;HaplotypeScore=177.1574;InbreedingCoeff=0.4101;MQ=39.18;MQ0=62;MQRankSum=-4.627;QD=2.90;ReadPosRankSum=-1.768;VQSLOD=1.8690;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:44,1:40:36.04:36,0,519	1/1:12,1:12:14.76:119,15,0	0/0:24,0:1:3:0,3,29	0/0:41,0:2:6.02:0,6,74	1/1:26,1:26:2.90:18,3,0	0/0:31,0:29:53.47:0,53,744	0/0:46,0:39:68.50:0,69,1029	0/1:25,0:7:5.66:6,0,102	0/0:50,0:48:92.86:0,93,1342	0/1:22,0:18:99:101,0,164	1/1:15,0:15:7.94:69,8,0	1/1:9,0:9:8.13:85,8,0	1/1:19,0:16:27.97:231,28,0	1/1:6,0:6:5.98:54,6,0	0/1:23,1:21:4.01:78,0,4	0/0:29,0:27:42.06:0,42,592	0/0:38,0:38:89.61:0,90,1327	0/1:17,0:15:87.91:88,0,98	0/0:30,0:14:36.12:0,36,544	0/0:18,0:18:45.12:0,45,646	1/1:53,2:41:7.22:59,7,0	1/1:30,0:28:22.85:163,23,0	0/1:16,0:15:12:63,0,12	0/1:22,0:20:17.22:20,0,17	0/0:33,0:32:59.94:0,60,866	0/0:43,0:36:99:0,99,1346	0/0:19,0:17:32.90:0,33,469	0/0:18,0:15:36.08:0,36,482
chr10	7077381	.	TGA	T	1390.35	PASS	AB=0.978;AC=27;AF=0.482;AN=56;BaseQRankSum=6.930;DP=731;FS=12.621;HRun=0;HaplotypeScore=164.6354;InbreedingCoeff=0.5338;MQ=39.07;MQ0=62;MQRankSum=-1.098;QD=4.15;ReadPosRankSum=-3.551;VQSLOD=1.1292;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:39,0:35:60.50:60,0,91	1/1:11,0:10:10.77:83,11,0	1/1:19,0:1:2.04:6,2,0	0/0:37,0:2:5.72:0,6,33	1/1:22,3:24:2.21:23,2,0	0/0:29,0:27:47.59:0,48,834	0/0:48,0:41:65.83:0,66,1223	0/1:19,0:6:17.40:28,0,17	0/0:48,0:46:88.29:0,88,1474	0/1:20,1:18:70.52:124,0,71	1/1:13,3:16:10.10:159,10,0	1/1:8,0:8:11.60:131,12,0	1/1:17,1:15:21.05:239,21,0	0/1:5,0:6:4.70:20,0,5	1/1:22,1:21:21.81:176,22,0	0/0:31,0:27:42:0,42,699	0/0:40,0:39:73.13:0,73,1646	0/1:14,1:15:40.13:113,0,40	0/0:32,0:13:39.08:0,39,663	0/0:20,0:20:44.64:0,45,779	1/1:53,1:37:7.20:59,7,0	1/1:27,2:27:24.94:245,25,0	1/1:14,0:13:5.71:49,6,0	1/1:17,1:16:6.01:73,6,0	0/0:35,0:34:51.38:0,51,920	0/0:43,0:34:72.29:0,72,1376	0/0:16,0:16:33.03:0,33,569	0/0:17,0:14:16.84:0,17,386
chr10	7077383	.	AGT	A	509.66	PASS	AB=0.978;AC=20;AF=0.385;AN=52;BaseQRankSum=5.820;DP=721;FS=17.170;HRun=0;HaplotypeScore=165.3089;InbreedingCoeff=0.3955;MQ=38.93;MQ0=60;MQRankSum=0.488;QD=1.78;ReadPosRankSum=-2.559;VQSLOD=1.1391;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:30,8:34:4.85:303,0,5	1/1:8,0:9:4.47:21,4,0	./.	./.	0/1:23,0:22:0.15:0,0,0	0/0:33,0:31:44.38:0,44,751	0/0:48,0:41:62.82:0,63,1026	0/0:19,1:5:3:0,3,28	0/0:48,0:46:76.80:0,77,1250	0/1:19,0:15:14.09:14,0,127	1/1:16,0:15:7.62:68,8,0	1/1:7,0:8:8.78:38,9,0	0/1:17,0:14:15.74:34,0,16	0/1:6,0:6:15.07:20,0,15	1/1:22,0:20:12.86:62,13,0	0/0:31,0:27:39.05:0,39,574	0/0:42,0:41:99:0,103,1598	0/1:15,0:15:16.87:17,0,113	0/0:36,0:13:36.11:0,36,578	0/0:19,0:19:41.65:0,42,688	0/1:54,0:36:3.61:4,0,13	1/1:29,0:27:8.15:55,8,0	0/1:13,0:12:0.49:2,0,0	1/1:17,0:15:4.25:36,4,0	0/0:34,0:33:58.37:0,58,885	0/0:41,0:33:75.92:0,76,1108	0/0:17,0:17:33.07:0,33,513	0/0:17,0:14:32.51:0,33,424
chr10	7077388	.	G	GAA	470.78	PASS	AB=0.907;AC=13;AF=0.232;AN=56;BaseQRankSum=6.428;DP=687;FS=21.291;HRun=0;HaplotypeScore=159.6496;InbreedingCoeff=0.1737;MQ=38.35;MQ0=56;MQRankSum=-6.012;QD=3.20;ReadPosRankSum=-1.894;VQSLOD=1.2229;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:34:43.46:0,43,385	0/1:8,1:9:6.55:59,0,7	0/0:6,0:1:3.01:0,3,44	0/0:22,0:1:2.97:0,3,20	1/1:19,1:19:2.32:3,2,0	0/0:32,0:30:47.97:0,48,775	0/0:50,0:42:62.88:0,63,1025	0/0:20,0:4:6.02:0,6,85	0/0:47,0:45:80.95:0,81,1277	0/1:15,1:14:25.49:25,0,305	0/1:15,1:15:6.33:6,0,24	0/1:8,1:8:26.70:45,0,27	0/1:11,1:9:62.64:70,0,63	1/1:2,3:5:6.02:107,6,0	1/1:12,9:19:11.06:154,11,0	0/0:30,0:26:39.11:0,39,605	0/0:46,0:44:99:0,110,1760	0/1:10,3:13:99:142,0,125	0/0:36,0:13:39.13:0,39,624	0/0:20,0:19:45.07:0,45,707	0/0:55,3:38:7.31:0,7,63	0/1:24,2:24:4.01:4,0,14	0/0:12,0:11:5.92:0,6,39	0/0:16,0:14:5.06:0,5,26	0/0:33,0:32:63.13:0,63,1020	0/0:37,0:29:78.26:0,78,1200	0/0:19,0:19:36.08:0,36,539	0/0:17,0:14:33.11:0,33,487
chr10	7077389	.	T	TGA	654.88	PASS	AB=0.957;AC=22;AF=0.423;AN=52;BaseQRankSum=5.955;DP=678;FS=42.526;HRun=0;HaplotypeScore=164.8410;InbreedingCoeff=0.5386;MQ=38.53;MQ0=55;MQRankSum=-0.890;QD=2.68;ReadPosRankSum=-2.484;VQSLOD=0.9763;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:31,8:34:87.65:265,0,88	1/1:9,0:9:5.78:37,6,0	./.	./.	0/0:20,0:19:3.46:0,3,24	0/0:32,0:30:47.48:0,47,691	0/0:52,0:44:62.50:0,63,937	0/0:21,0:4:5.97:0,6,49	0/0:47,0:45:74.89:0,75,1120	0/1:16,0:14:45.72:46,0,200	1/1:15,0:14:10.55:71,11,0	1/1:9,0:8:8.85:74,9,0	1/1:12,0:9:10.56:65,11,0	1/1:4,0:4:5.84:35,6,0	1/1:19,0:17:11.47:57,11,0	0/0:30,0:26:39.04:0,39,530	0/0:46,0:44:99:0,114,1568	0/1:11,0:11:17.56:18,0,117	0/0:34,0:13:39.07:0,39,546	0/0:21,0:20:45.07:0,45,658	0/1:57,0:37:10.85:47,0,11	1/1:25,0:23:6.18:32,6,0	1/1:12,0:11:6.01:56,6,0	1/1:16,0:14:5.47:36,5,0	0/0:33,0:32:62.91:0,63,877	0/0:38,0:30:77.81:0,78,980	0/0:20,0:20:36.04:0,36,486	0/0:17,0:14:32.88:0,33,383
chr10	7077391	.	TGA	T	91.84	PASS	AB=0.986;AC=11;AF=0.212;AN=52;BaseQRankSum=3.421;DP=667;FS=8.368;HRun=0;HaplotypeScore=162.3724;InbreedingCoeff=0.0794;MQ=38.25;MQ0=58;MQRankSum=-1.390;QD=0.57;ReadPosRankSum=-4.031;VQSLOD=0.4457;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:37,1:33:62.80:64,0,63	1/1:7,1:8:5.12:31,5,0	./.	./.	0/0:16,3:18:4.66:0,5,20	0/0:33,0:31:52.57:0,53,897	0/0:52,0:44:63.07:0,63,1000	0/1:22,0:4:2.45:15,0,2	0/0:47,0:45:69.56:0,70,1324	0/1:17,0:14:42.89:43,0,116	0/1:16,0:15:2.18:18,0,2	0/0:8,0:7:8.18:0,8,27	0/1:10,0:7:16.91:17,0,36	0/1:4,0:4:3.95:4,0,16	0/1:19,0:17:6.03:6,0,14	0/0:27,0:24:32.85:0,33,511	0/0:43,1:42:99:0,111,1858	0/1:11,0:11:23.88:24,0,160	0/0:36,0:13:36.11:0,36,624	0/0:22,0:21:40.63:0,41,718	0/0:58,0:37:6.15:0,6,55	0/0:22,0:21:1.60:0,2,10	0/0:10,0:9:4.59:0,5,16	0/1:14,1:13:3.60:4,0,4	0/0:33,0:32:28.13:0,28,880	0/0:39,0:30:50.72:0,51,959	0/0:21,0:21:36:0,36,567	0/0:17,0:14:31.20:0,31,354
chr10	7077393	.	AGT	A	121.23	PASS	AB=0.936;AC=13;AF=0.250;AN=52;BaseQRankSum=4.969;DP=676;FS=13.497;HRun=0;HaplotypeScore=165.5329;InbreedingCoeff=0.1852;MQ=37.94;MQ0=60;MQRankSum=-4.830;QD=0.63;ReadPosRankSum=-3.469;VQSLOD=0.8656;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:34:33.19:0,33,250	1/1:7,2:9:4.56:32,5,0	./.	./.	0/0:17,3:18:2.71:0,3,21	0/0:35,0:32:55.60:0,56,897	0/0:51,0:43:47.78:0,48,793	0/0:23,0:5:4.56:0,5,32	0/0:47,0:45:68.29:0,68,1129	0/1:15,4:15:91.74:114,0,92	0/1:11,5:15:0.66:7,0,1	0/1:8,0:7:4.14:4,0,29	0/0:10,0:7:7.79:0,8,62	0/1:4,0:4:15.91:16,0,34	1/1:19,0:17:1.84:29,2,0	0/0:30,0:26:27.04:0,27,438	0/0:44,0:41:99:0,103,1774	0/1:10,0:10:34.16:34,0,143	0/0:36,0:12:33.11:0,33,519	0/0:22,0:21:41.50:0,41,653	0/1:57,2:38:4.41:4,0,50	0/0:15,6:20:5.66:0,6,29	1/1:6,4:9:2.24:10,2,0	0/0:8,6:13:2.73:0,3,12	0/0:36,0:35:60.10:0,60,939	0/1:39,0:28:0.40:0,0,706	0/0:19,1:20:36.05:0,36,536	0/0:17,0:14:19.10:0,19,285
chr10	7077399	.	TGA	T	252.68	PASS	AB=0.983;AC=20;AF=0.385;AN=52;BaseQRankSum=5.591;DP=651;FS=24.802;HRun=0;HaplotypeScore=167.1382;InbreedingCoeff=0.1316;MQ=37.49;MQ0=62;MQRankSum=-3.052;QD=0.92;ReadPosRankSum=-3.807;VQSLOD=0.1241;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:38,1:32:26.13:26,0,278	1/1:6,3:9:10.09:53,10,0	./.	./.	0/1:18,0:16:7.55:8,0,11	0/0:36,0:34:58.32:0,58,950	0/0:49,1:43:35.87:0,36,765	1/1:27,0:5:1.12:29,1,0	0/0:47,0:46:52.73:0,53,997	0/1:20,0:17:73.44:73,0,106	1/1:14,0:13:4.14:47,4,0	0/1:7,0:6:10.76:31,0,11	0/1:10,0:7:15.52:16,0,64	0/1:4,0:4:5.07:5,0,44	0/1:17,0:16:6.51:7,0,13	0/0:31,0:26:32.36:0,32,486	0/0:44,0:41:99:0,108,1916	0/1:9,1:10:36.51:37,0,113	0/0:41,0:14:38.77:0,39,542	0/0:19,0:18:38.57:0,39,660	0/1:56,0:36:7.50:8,0,33	0/1:17,1:17:5.11:17,0,5	1/1:10,0:9:5.97:49,6,0	1/1:14,1:13:2.22:7,2,0	0/0:33,0:32:59.72:0,60,1020	0/0:37,0:27:49.98:0,50,812	0/0:20,0:20:35.95:0,36,492	0/0:16,0:13:10.03:0,10,331
chr10	7077405	.	T	TGA	218.73	PASS	AB=0.927;AC=18;AF=0.346;AN=52;BaseQRankSum=3.639;DP=652;FS=16.800;HRun=0;HaplotypeScore=169.8672;InbreedingCoeff=0.3332;MQ=37.32;MQ0=57;MQRankSum=-2.779;QD=0.91;ReadPosRankSum=-2.048;VQSLOD=1.5649;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:35:31.77:0,32,204	0/1:7,1:8:13.74:47,0,14	./.	./.	1/1:16,2:16:5.83:110,6,0	0/0:36,0:34:54.53:0,55,795	0/0:52,0:45:50.67:0,51,657	0/1:28,1:6:9.07:9,0,52	0/0:43,0:42:40.26:0,40,722	0/0:20,0:16:6.50:0,7,270	1/1:13,0:12:0.22:11,0,0	0/1:5,1:5:16.54:17,0,36	0/0:11,0:8:10.83:0,11,104	0/0:5,0:5:5.22:0,5,64	1/1:13,3:15:7.36:30,7,0	0/0:37,0:32:41.80:0,42,516	0/0:44,0:41:99:0,105,1534	0/0:10,0:10:22.07:0,22,186	0/1:36,1:14:18.69:19,0,441	0/0:20,0:19:42.03:0,42,572	1/1:44,12:35:2.58:58,3,0	1/1:16,0:15:0.38:2,0,0	1/1:10,0:9:5.74:36,6,0	0/1:13,1:12:0.01:0,0,0	0/0:34,0:33:59.90:0,60,875	0/0:38,0:28:75.03:0,75,954	0/1:16,1:16:30.36:30,0,285	0/0:15,0:12:26.98:0,27,313
chr10	7077411	.	TGA	T	38.42	PASS	AB=0.975;AC=12;AF=0.214;AN=56;BaseQRankSum=3.896;DP=648;FS=3.334;HRun=0;HaplotypeScore=156.9032;InbreedingCoeff=0.2004;MQ=37.50;MQ0=57;MQRankSum=-2.400;QD=0.23;ReadPosRankSum=-1.879;VQSLOD=2.4398;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:39,0:33:30.91:31,0,209	1/1:8,0:8:5.30:34,5,0	0/0:7,0:3:5.92:0,6,39	0/0:11,0:2:2.98:0,3,22	0/1:14,0:12:4.99:5,0,41	0/0:37,0:35:55.90:0,56,785	0/0:48,0:40:38.53:0,39,673	0/1:27,0:5:7.79:8,0,36	0/0:44,0:44:46.51:0,47,924	0/1:19,1:16:52.51:53,0,250	0/0:12,1:12:6.98:0,7,41	0/0:5,0:4:3.79:0,4,19	0/0:10,0:7:11.33:0,11,110	0/0:3,0:3:5.81:0,6,76	1/1:14,0:13:0.94:24,1,0	0/0:41,0:37:34.14:0,34,574	0/0:47,0:44:99:0,114,1914	0/1:9,0:9:3.66:4,0,124	0/0:40,0:16:44.69:0,45,577	0/0:20,0:19:41.51:0,42,708	0/0:52,0:32:2.62:0,3,42	0/1:9,2:10:0.36:0,0,1	0/1:10,0:9:0:0,0,0	0/1:14,0:12:0:0,0,0	0/0:37,0:36:52.13:0,52,1036	0/0:35,0:25:47.46:0,47,844	0/0:17,0:16:27.06:0,27,401	0/0:15,0:12:16.75:0,17,229
chr10	7077413	.	A	AGT	643.57	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=2.009;DP=643;FS=6.442;HRun=0;HaplotypeScore=153.5564;InbreedingCoeff=0.3610;MQ=37.65;MQ0=59;MQRankSum=-0.903;QD=3.50;ReadPosRankSum=0.591;VQSLOD=1.8063;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:25,14:34:39:637,39,0	1/1:8,0:8:3.54:11,4,0	0/0:8,0:3:6.02:0,6,75	0/0:14,0:2:3.01:0,3,39	1/1:14,0:12:4.97:16,5,0	0/0:35,0:33:37.56:0,38,530	0/0:48,0:40:38.90:0,39,490	0/0:26,0:5:5.62:0,6,62	0/0:42,0:43:45.92:0,46,722	0/0:20,0:16:28.66:0,29,335	0/1:13,0:12:4.70:5,0,32	0/0:5,0:4:2.97:0,3,21	0/0:10,0:7:11.14:0,11,99	0/0:3,0:3:5.93:0,6,60	1/1:14,0:13:3.64:14,4,0	0/0:41,0:37:46.03:0,46,543	0/0:49,0:46:99:0,108,1368	0/0:8,0:8:8.39:0,8,117	0/0:38,0:15:37.72:0,38,442	0/0:20,0:19:42.07:0,42,559	0/0:52,0:32:1.94:0,2,8	0/1:11,0:10:0.16:0,0,0	0/1:9,0:7:0:0,0,0	0/1:14,0:12:0:0,0,0	0/0:38,0:37:59.86:0,60,783	0/1:34,0:23:7.74:8,0,423	0/1:15,0:14:9.20:9,0,167	0/1:13,0:10:73.28:82,0,73
chr10	7077419	.	A	AGT	252.87	PASS	AB=0.964;AC=9;AF=0.167;AN=54;BaseQRankSum=1.782;DP=640;FS=1.762;HRun=0;HaplotypeScore=152.5949;InbreedingCoeff=0.0132;MQ=37.89;MQ0=58;MQRankSum=-1.109;QD=1.85;ReadPosRankSum=1.838;VQSLOD=2.8103;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:40,0:36:33.11:33,0,95	0/0:7,0:7:3.88:0,4,36	0/0:13,0:4:11.90:0,12,130	0/0:26,0:2:3.01:0,3,39	0/0:14,0:12:5.65:0,6,53	0/0:31,0:29:36.10:0,36,435	0/0:51,0:43:26.62:0,27,320	0/0:24,0:5:8.64:0,9,114	0/0:42,0:41:56.99:0,57,627	0/0:19,0:15:8.51:0,9,153	0/0:13,0:12:7.49:0,7,65	0/0:3,0:2:2.84:0,3,14	0/1:11,0:8:15.80:16,0,31	1/1:3,0:3:0.47:1,0,0	0/0:12,0:11:3.80:0,4,11	0/0:42,0:39:45.15:0,45,486	0/0:49,0:46:99:0,108,1283	0/0:8,0:8:6.11:0,6,60	0/0:30,0:14:36.06:0,36,411	0/0:20,0:19:42.04:0,42,486	0/0:52,0:32:2.58:0,3,39	0/1:12,0:11:0.21:0,0,0	./.	0/1:14,0:12:0:0,0,0	0/0:37,0:36:66.16:0,66,778	0/1:29,0:18:85.77:86,0,376	0/1:14,2:15:99:121,0,126	0/1:10,2:10:42.22:107,0,42
chr10	7077427	.	TGA	T	1570.39	PASS	AB=0.982;AC=20;AF=0.370;AN=54;BaseQRankSum=0.322;DP=631;FS=17.226;HRun=0;HaplotypeScore=137.7916;InbreedingCoeff=0.0147;MQ=38.44;MQ0=58;MQRankSum=6.610;QD=3.95;ReadPosRankSum=4.581;VQSLOD=1.3522;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:35:56.44:0,56,951	0/0:7,0:7:1.60:0,2,35	0/0:15,0:4:12.04:0,12,206	0/0:37,0:2:5.98:0,6,78	0/0:15,0:12:5.58:0,6,83	1/1:30,0:29:13.53:163,14,0	0/1:50,0:43:47.22:64,0,47	0/0:24,0:6:11.39:0,11,165	1/1:37,2:38:14.40:305,14,0	0/1:16,0:13:11.97:12,0,230	0/0:12,0:11:6.01:0,6,96	1/1:3,0:2:0.89:2,1,0	0/1:10,0:8:6.75:7,0,45	0/1:2,0:2:0:0,0,0	0/0:10,0:9:6.37:0,6,39	1/1:42,0:39:39.60:240,40,0	0/1:49,0:46:99:369,0,100	0/0:6,0:6:6.37:0,6,73	0/1:30,0:15:74.42:74,0,131	0/1:23,0:22:6.79:133,0,7	0/0:53,0:32:2.61:0,3,53	0/0:7,0:6:0.11:0,0,1	./.	0/1:10,0:10:0:0,0,0	0/1:38,0:38:10.60:216,0,11	0/1:28,1:17:30.89:31,0,551	0/1:14,0:13:28.53:29,0,214	0/1:10,3:10:63.27:76,0,63
chr10	7077429	.	AGT	A	4564.99	PASS	AB=0.836;AC=22;AF=0.407;AN=54;BaseQRankSum=-6.922;DP=611;FS=10.885;HRun=0;HaplotypeScore=124.9383;InbreedingCoeff=0.4175;MQ=38.91;MQ0=57;MQRankSum=8.211;QD=12.97;ReadPosRankSum=3.196;VQSLOD=4.2940;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:33:54.01:0,54,911	0/0:7,0:7:5.67:0,6,36	0/0:17,0:4:12.04:0,12,207	0/0:36,0:2:6.02:0,6,92	0/1:12,0:10:5.59:6,0,76	1/1:2,28:29:37.29:462,37,0	1/1:16,35:44:18:240,18,0	0/0:24,0:6:9.01:0,9,127	1/1:7,32:38:57.16:716,57,0	0/0:14,0:11:20.85:0,21,228	0/0:9,0:9:6.01:0,6,89	1/1:2,0:2:2.84:14,3,0	0/1:9,0:7:18.30:18,0,42	0/1:0,0:1:0:0,0,0	0/0:10,0:9:6.17:0,6,47	1/1:8,31:36:35.90:537,36,0	0/1:11,38:46:61.04:1096,0,61	0/0:4,0:4:5.98:0,6,55	0/1:15,12:15:73.56:265,0,74	1/1:4,18:21:33.58:440,34,0	0/0:49,1:31:2.99:0,3,52	0/1:7,0:6:0.09:0,0,0	./.	0/1:10,0:10:0:0,0,0	1/1:5,34:39:57.18:751,57,0	0/0:28,0:17:20.50:0,21,499	0/0:15,0:14:15.32:0,15,242	0/1:13,0:10:21.09:21,0,104
chr10	7077445	.	AGTGTAT	A	96.04	PASS	AB=0.932;AC=12;AF=0.222;AN=54;BaseQRankSum=5.746;DP=600;FS=13.977;HRun=0;HaplotypeScore=160.6756;InbreedingCoeff=0.2068;MQ=41.58;MQ0=44;MQRankSum=-5.534;QD=1.39;ReadPosRankSum=-0.777;VQSLOD=2.1408;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:39:78.19:0,78,2389	1/1:2,1:3:3.01:70,3,0	0/0:28,0:4:11.93:0,12,197	0/0:60,0:4:6.48:0,6,60	1/1:10,2:8:2.94:18,3,0	0/0:31,0:30:41.02:0,41,991	0/0:49,0:45:44.77:0,45,1173	0/0:14,0:5:6:0,6,86	0/0:43,0:42:75.07:0,75,1869	0/1:10,1:8:76.56:77,0,124	0/1:7,2:8:13.24:13,0,32	1/1:4,0:3:2.52:14,3,0	0/1:7,0:6:15.67:19,0,16	0/0:3,0:3:2.37:0,2,8	0/1:10,0:8:5.63:6,0,48	0/0:35,0:34:48.14:0,48,1437	0/0:51,0:48:99:0,120,2659	0/1:7,0:7:8.74:9,0,62	0/0:25,0:15:39.13:0,39,1064	0/0:25,0:24:47.82:0,48,1121	0/0:42,0:32:2.90:0,3,43	0/1:5,1:6:0.09:0,0,0	./.	0/0:3,0:3:0:0,0,0	0/0:32,0:32:63.22:0,63,1672	0/0:19,0:13:3.87:0,4,240	0/0:12,0:12:9.66:0,10,145	0/0:9,0:6:5.09:0,5,51
chr10	7077461	.	A	AAT	56.99	PASS	AB=0.958;AC=12;AF=0.231;AN=52;BaseQRankSum=4.474;DP=608;FS=1.182;HRun=0;HaplotypeScore=155.6268;InbreedingCoeff=0.3612;MQ=47.39;MQ0=47;MQRankSum=-5.039;QD=0.34;ReadPosRankSum=-2.099;VQSLOD=2.6085;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:47:99:0,99,1560	0/0:2,0:2:2.88:0,3,15	0/0:37,0:5:2.36:0,2,22	0/0:77,0:12:21.26:0,21,201	1/1:7,0:4:2.97:20,3,0	0/0:30,0:30:38:0,38,652	0/1:44,3:44:49.66:50,0,794	0/0:13,0:8:16.27:0,16,219	0/0:46,0:45:89.78:0,90,1306	0/0:10,0:8:10.97:0,11,167	1/1:6,0:6:2.87:21,3,0	0/0:5,0:4:2.95:0,3,48	0/0:5,0:5:9.45:0,9,98	0/0:5,0:5:5.79:0,6,78	1/1:8,0:6:1.96:17,2,0	0/0:32,0:31:57.74:0,58,903	0/1:44,6:47:64.32:64,0,1583	0/0:7,0:7:12.04:0,12,177	0/0:27,0:14:41.98:0,42,598	0/0:31,0:30:65.38:0,65,1004	0/1:40,0:32:0.05:0,0,0	1/1:8,0:8:0.16:1,0,0	./.	0/1:2,0:2:0:0,0,0	0/0:29,0:29:63.20:0,63,977	0/0:17,0:12:28.82:0,29,220	0/0:13,0:11:5.29:0,5,46	./.
chr10	7077485	.	TGTGAGAGTGTGAGA	T	1348.88	PASS	AB=1.000;AC=23;AF=0.442;AN=52;BaseQRankSum=5.201;DP=548;FS=43.349;HRun=0;HaplotypeScore=189.8758;InbreedingCoeff=0.5268;MQ=52.68;MQ0=34;MQRankSum=-7.172;QD=9.37;ReadPosRankSum=-2.474;VQSLOD=0.8858;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:49:88.44:0,88,2805	1/1:1,0:1:2.96:19,3,0	0/0:39,0:12:15.56:0,16,539	0/1:72,0:17:38.01:38,0,336	./.	0/0:18,0:18:33.07:0,33,1123	0/0:51,0:49:87.21:0,87,2045	1/1:11,0:7:18.01:361,18,0	0/0:41,0:40:86.94:0,87,3060	1/1:6,0:5:4.81:150,5,0	0/0:3,0:3:0.47:0,0,1	1/1:5,1:4:2.52:38,3,0	1/1:4,0:4:9.03:214,9,0	1/1:4,1:5:5.97:173,6,0	1/1:4,0:3:0.47:1,0,0	0/0:31,0:31:43.41:0,43,1562	0/0:47,0:46:75.52:0,76,3709	1/1:4,1:5:15.05:385,15,0	0/0:30,0:19:31:0,31,857	0/0:28,0:28:59.87:0,60,2357	0/0:32,0:23:0.47:0,0,1	1/1:2,2:4:2.28:81,2,0	0/0:1,0:1:0:0,0,0	./.	0/0:25,0:24:35.08:0,35,1033	0/1:12,0:8:40.16:44,0,40	0/1:10,0:9:1.86:2,0,35	1/1:3,0:2:0.59:2,1,0
chr10	7077495	.	TGA	T	481.85	PASS	AB=0.861;AC=22;AF=0.440;AN=50;BaseQRankSum=6.877;DP=506;FS=20.364;HRun=0;HaplotypeScore=114.5302;InbreedingCoeff=0.4477;MQ=53.18;MQ0=25;MQRankSum=-6.389;QD=3.92;ReadPosRankSum=-2.371;VQSLOD=1.0509;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:48:63.08:0,63,794	./.	0/0:34,0:14:23.15:0,23,334	0/0:67,0:18:19.69:0,20,229	./.	0/0:16,0:15:5.09:0,5,226	0/0:52,0:50:92.65:0,93,862	1/1:10,1:6:7.25:37,7,0	0/0:35,0:34:87.08:0,87,804	0/1:4,0:3:18.55:19,0,31	0/0:2,0:2:0:0,0,1	1/1:4,0:4:2.97:20,3,0	1/1:3,0:4:10.85:82,11,0	1/1:6,0:6:5.84:41,6,0	0/1:4,0:3:0:0,0,0	0/1:32,0:32:24.72:25,0,479	0/0:42,0:42:99:0,103,979	1/1:5,0:5:14.67:101,15,0	0/1:24,0:19:7.01:7,0,269	0/0:28,0:28:38.01:0,38,521	0/0:27,0:19:0:0,0,1	1/1:4,0:4:2.89:11,3,0	0/1:0,0:1:0:0,0,0	./.	0/0:24,0:23:18.86:0,19,349	0/1:6,5:9:17.05:122,0,17	1/1:2,7:8:11.04:127,11,0	1/1:0,2:2:5.98:50,6,0
chr10	7077497	.	A	AGT	1096.37	PASS	AB=0.833;AC=22;AF=0.458;AN=48;BaseQRankSum=7.479;DP=499;FS=24.147;HRun=0;HaplotypeScore=112.9929;InbreedingCoeff=0.6928;MQ=53.24;MQ0=24;MQRankSum=-6.882;QD=16.36;ReadPosRankSum=-1.681;VQSLOD=1.6841;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:47:62.59:0,63,597	./.	0/0:35,0:14:13:0,13,271	0/0:65,0:17:20.90:0,21,282	./.	0/0:16,0:15:4.85:0,5,165	0/0:56,0:52:92:0,92,676	1/1:9,2:6:12.02:178,12,0	0/0:34,0:33:87.96:0,88,645	0/1:2,2:3:12.12:93,0,12	./.	1/1:4,1:4:2.97:20,3,0	1/1:2,2:4:9.03:136,9,0	1/1:3,3:6:6.02:95,6,0	1/1:2,2:3:3:25,3,0	0/0:31,0:31:13.11:0,13,365	0/0:42,0:42:99:0,101,760	1/1:1,4:5:14.64:221,15,0	0/0:22,0:18:22.39:0,22,231	0/0:28,0:28:58.73:0,59,423	0/0:11,16:18:0:0,0,0	1/1:2,2:4:2.75:50,3,0	0/1:1,0:1:0:0,0,0	./.	0/0:23,0:22:18.74:0,19,278	1/1:10,2:9:13.61:186,14,0	1/1:8,1:8:17.78:186,18,0	1/1:2,0:2:6.02:78,6,0
chr10	7077503	.	TGA	T	498.37	PASS	AB=0.950;AC=16;AF=0.333;AN=48;BaseQRankSum=7.852;DP=526;FS=17.768;HRun=0;HaplotypeScore=118.9878;InbreedingCoeff=0.3772;MQ=52.26;MQ0=30;MQRankSum=-8.265;QD=6.00;ReadPosRankSum=-0.197;VQSLOD=1.8274;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:45:84.19:0,84,1613	./.	0/0:33,0:14:23.40:0,23,347	0/0:57,0:15:10.21:0,10,157	./.	0/0:19,0:18:42.11:0,42,677	0/0:56,0:51:99:0,111,1797	0/1:17,1:11:19.26:19,0,150	0/0:36,0:35:91.41:0,91,1549	0/1:6,0:6:11.98:12,0,158	0/0:2,0:1:0:0,0,0	0/1:5,0:4:0:0,0,0	0/1:4,0:4:11.94:55,0,12	1/1:9,0:9:1.21:26,1,0	./.	0/0:30,0:29:62.12:0,62,1025	0/0:49,0:49:99:0,124,2058	1/1:6,0:5:4.41:75,4,0	0/0:23,0:14:42.07:0,42,648	0/0:26,0:26:60.17:0,60,1062	0/0:37,0:25:0:0,0,0	1/1:4,0:4:2.71:10,3,0	0/1:1,0:1:0:0,0,0	./.	0/0:22,0:21:42.06:0,42,702	0/1:12,6:14:22.12:225,0,22	1/1:2,8:9:5.91:159,6,0	1/1:0,2:2:6:56,6,0
chr10	7077517	.	TGTGA	T	395.13	PASS	AB=0.824;AC=12;AF=0.261;AN=46;BaseQRankSum=6.958;DP=535;FS=9.032;HRun=0;HaplotypeScore=118.6273;InbreedingCoeff=0.1303;MQ=42.49;MQ0=33;MQRankSum=-7.122;QD=3.11;ReadPosRankSum=0.387;VQSLOD=1.7281;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:45:75.59:0,76,1697	./.	0/0:21,0:6:14.87:0,15,180	0/0:41,0:7:8.98:0,9,138	./.	0/0:21,0:18:45.15:0,45,1078	0/0:61,0:54:99:0,107,2421	0/0:30,0:17:33.56:0,34,600	0/0:29,0:29:77.85:0,78,1913	0/1:7,1:8:41.24:41,0,245	./.	0/0:4,1:3:0:0,0,0	0/1:2,2:4:14.92:94,0,15	0/1:6,3:9:29.69:35,0,30	./.	0/0:21,0:20:45.06:0,45,1054	0/0:45,0:45:99:0,109,2779	0/1:3,4:6:50.03:189,0,50	0/0:25,0:15:24.57:0,25,802	0/0:26,0:23:51.18:0,51,1325	1/1:40,13:36:0.01:1,0,0	1/1:7,1:6:0.45:1,0,0	0/0:2,0:2:0:0,0,0	./.	0/0:17,0:16:30.10:0,30,717	0/1:22,0:18:65.47:66,0,65	0/1:13,0:11:23.42:67,0,23	1/1:3,0:3:5.12:23,5,0
chr10	7077531	.	TGA	T	60.20	PASS	AB=0.944;AC=11;AF=0.239;AN=46;BaseQRankSum=6.183;DP=543;FS=9.528;HRun=0;HaplotypeScore=104.9035;InbreedingCoeff=0.0325;MQ=39.87;MQ0=37;MQRankSum=-7.338;QD=0.33;ReadPosRankSum=-3.294;VQSLOD=0.4934;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,1:43:81.73:0,82,1404	./.	0/0:8,0:2:5.85:0,6,45	0/1:17,1:3:10.82:11,0,22	./.	0/0:21,0:18:48.11:0,48,817	0/0:67,0:60:99:0,117,2169	0/1:36,2:22:89.82:90,0,304	0/0:27,0:27:57.96:0,58,1233	0/1:9,0:8:6.87:7,0,164	./.	0/0:8,0:6:0:0,0,0	0/0:6,0:6:5.11:0,5,57	0/1:11,1:11:0.91:1,0,58	./.	0/0:19,0:17:39.03:0,39,716	0/0:44,0:44:88.74:0,89,2086	0/1:7,0:6:32.90:33,0,81	0/0:31,0:15:37.44:0,37,669	0/0:25,0:20:54.16:0,54,959	1/1:59,4:42:0.04:1,0,0	1/1:8,0:6:0.98:3,1,0	0/0:2,0:2:0:0,0,0	./.	0/0:19,0:17:30.01:0,30,476	0/1:23,0:18:14.18:14,0,205	0/0:17,0:14:21.91:0,22,160	0/1:4,1:3:11.95:12,0,21
chr10	7077535	.	T	TGA	177.17	PASS	AB=0.898;AC=8;AF=0.167;AN=48;BaseQRankSum=2.444;DP=540;FS=22.752;HRun=0;HaplotypeScore=100.6506;InbreedingCoeff=0.3038;MQ=39.77;MQ0=37;MQRankSum=-5.037;QD=1.88;ReadPosRankSum=-2.358;VQSLOD=-0.2000;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:41:79.94:0,80,1112	./.	0/0:6,0:2:5.98:0,6,56	0/0:11,0:2:5.83:0,6,37	./.	0/0:20,0:17:42.08:0,42,642	0/0:67,0:60:99:0,120,1778	0/1:34,4:23:99:223,0,231	0/0:28,0:28:64.43:0,64,945	0/0:8,0:7:16.82:0,17,204	./.	0/1:9,0:7:0:0,0,0	0/0:6,0:6:12.43:0,12,127	0/0:11,2:11:8.25:0,8,94	./.	0/0:18,0:15:36.12:0,36,550	0/0:45,0:45:99:0,121,1739	0/0:8,0:7:17.64:0,18,156	0/0:30,0:16:44.76:0,45,582	0/0:25,0:19:51.16:0,51,755	0/0:63,3:42:0.45:0,0,1	1/1:8,0:6:3:33,3,0	0/1:1,1:2:0:0,0,0	0/1:7,2:9:0:0,0,0	0/0:18,0:16:11.82:0,12,373	0/1:23,0:18:5.45:5,0,247	0/0:17,0:14:23.85:0,24,270	0/1:5,0:3:15.54:16,0,45
chr10	7077563	.	TGTGTGA	T	1056.07	PASS	AB=1.000;AC=12;AF=0.240;AN=50;BaseQRankSum=6.589;DP=561;FS=0.000;HRun=0;HaplotypeScore=137.1746;InbreedingCoeff=0.3274;MQ=37.49;MQ0=53;MQRankSum=-6.182;QD=8.45;ReadPosRankSum=-1.748;VQSLOD=1.7744;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:30:50.74:0,51,1530	1/1:5,0:4:0.89:2,1,0	./.	./.	0/0:10,0:8:3.01:0,3,30	0/0:19,0:17:37.24:0,37,1237	0/0:64,0:56:95.22:0,95,2644	0/1:25,0:12:20.95:21,0,96	0/0:25,0:22:8.80:0,9,729	0/1:12,0:8:14.86:15,0,88	./.	0/0:11,0:10:4.45:0,4,54	0/0:15,0:15:17.58:0,18,143	0/0:13,0:12:6.16:0,6,32	0/0:8,0:6:2.55:0,3,10	0/0:20,0:17:23.64:0,24,667	0/0:45,0:44:88.56:0,89,2708	0/1:4,0:4:7.21:7,0,17	0/0:26,0:14:42.08:0,42,918	0/0:19,0:14:21.53:0,22,371	0/0:69,0:40:1.71:0,2,59	0/1:16,0:14:1.32:1,0,28	0/0:6,0:6:5.31:0,5,21	0/0:20,0:19:6.86:0,7,50	0/0:17,0:13:15.90:0,16,404	1/1:23,8:20:4.35:583,4,0	1/1:15,7:19:9.60:329,10,0	1/1:7,3:8:9.91:231,10,0
chr10	7077567	.	TGA	T	416.70	PASS	AB=0.983;AC=11;AF=0.212;AN=52;BaseQRankSum=6.536;DP=587;FS=6.320;HRun=0;HaplotypeScore=122.8627;InbreedingCoeff=0.0162;MQ=37.33;MQ0=63;MQRankSum=-3.647;QD=3.16;ReadPosRankSum=-2.306;VQSLOD=1.7274;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:29:9.81:0,10,874	1/1:5,0:4:2.37:8,2,0	./.	./.	0/0:11,1:9:1.45:0,1,32	0/0:20,0:18:31.77:0,32,708	0/0:64,0:56:95.55:0,96,1666	0/1:24,0:13:55.39:55,0,101	0/0:26,0:23:6.81:0,7,478	0/1:13,0:8:13.02:13,0,118	1/1:6,0:3:2.98:22,3,0	0/0:11,0:10:3.38:0,3,40	0/0:17,0:15:12.74:0,13,113	0/0:15,0:14:9.16:0,9,56	0/0:10,0:7:2.51:0,3,12	0/0:20,0:17:5.80:0,6,447	0/0:44,0:43:74.27:0,74,1601	0/1:5,0:5:24.28:24,0,27	0/0:30,0:17:50.86:0,51,708	0/0:21,0:15:21.51:0,22,283	0/0:71,1:40:2.75:0,3,57	0/1:15,0:14:3.73:4,0,76	0/0:9,0:9:7.87:0,8,45	0/0:22,0:21:10.65:0,11,74	0/0:17,0:12:18.02:0,18,278	0/1:32,1:21:51.60:225,0,52	0/1:21,0:18:9.13:111,0,9	0/1:9,1:8:6.59:84,0,7
chr10	7077573	.	T	TGA	409	PASS	AB=0.896;AC=11;AF=0.212;AN=52;BaseQRankSum=6.804;DP=606;FS=3.930;HRun=0;HaplotypeScore=138.2524;InbreedingCoeff=0.0459;MQ=37.18;MQ0=65;MQRankSum=-4.408;QD=2.88;ReadPosRankSum=-2.183;VQSLOD=2.1290;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:34:66.51:0,67,923	0/0:5,1:6:0.07:0,0,8	./.	./.	0/0:14,0:10:6:0,6,59	0/0:20,0:18:41.12:0,41,614	0/0:57,0:50:89.97:0,90,1269	0/0:24,0:12:13.94:0,14,125	0/0:25,0:22:30.56:0,31,445	0/1:12,2:8:3.69:115,0,4	1/1:6,1:4:0.79:20,1,0	1/1:7,6:11:3.48:59,3,0	0/1:15,3:15:23.76:128,0,24	0/0:13,4:17:5.26:0,5,26	0/0:12,1:10:1.55:0,2,4	0/0:23,0:20:35.62:0,36,445	0/0:45,0:43:94.62:0,95,1524	0/1:5,1:6:9.31:53,0,9	0/0:28,0:18:45.60:0,46,655	0/0:21,0:15:17.98:0,18,199	0/0:67,2:40:3.90:0,4,47	0/1:14,3:16:7.30:89,0,7	0/0:10,1:11:3.50:0,4,12	0/1:20,5:24:23.72:24,0,33	0/0:21,0:15:1.92:0,2,188	0/1:32,0:20:42.08:42,0,174	0/0:19,0:16:2.39:0,2,103	0/1:10,0:8:10.83:11,0,67
chr10	7077583	.	TGA	T	1388.80	PASS	AB=0.919;AC=26;AF=0.500;AN=52;BaseQRankSum=4.734;DP=606;FS=23.518;HRun=0;HaplotypeScore=132.1837;InbreedingCoeff=0.1133;MQ=37.65;MQ0=55;MQRankSum=-0.838;QD=4.07;ReadPosRankSum=-2.001;VQSLOD=0.7427;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:40,1:35:77.99:78,0,428	1/1:6,1:6:5.51:55,6,0	./.	./.	1/1:15,2:12:2.99:23,3,0	0/1:20,1:19:42.22:42,0,365	0/0:52,0:47:64.95:0,65,647	0/1:21,0:9:21.69:22,0,46	0/1:26,0:23:54.30:54,0,198	0/1:14,1:9:0.87:142,0,1	1/1:9,0:5:5.85:49,6,0	0/0:15,0:13:2.19:0,2,6	0/1:9,11:17:8.04:200,0,8	1/1:9,4:13:5.49:62,5,0	1/1:12,4:14:5.98:65,6,0	0/1:18,2:18:90.60:91,0,165	0/0:43,1:42:39.13:0,39,987	1/1:7,1:8:14.48:156,14,0	0/1:24,0:19:6.70:7,0,310	0/1:22,0:15:25.48:25,0,80	0/0:53,5:35:2.73:0,3,21	1/1:18,4:21:23.91:268,24,0	1/1:5,7:12:4.10:91,4,0	0/1:19,8:26:2.75:123,0,3	0/0:21,0:16:3.87:0,4,70	0/0:34,0:22:19.65:0,20,256	0/0:21,0:18:15.34:0,15,136	0/0:11,0:10:7.98:0,8,124
chr10	7077585	.	A	AGT	1731.68	PASS	AB=0.960;AC=26;AF=0.520;AN=50;BaseQRankSum=-0.897;DP=612;FS=3.076;HRun=0;HaplotypeScore=137.3161;InbreedingCoeff=-0.3955;MQ=37.75;MQ0=55;MQRankSum=-0.107;QD=3.24;ReadPosRankSum=0.102;VQSLOD=2.8692;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:37,4:36:79.13:274,0,79	1/1:7,0:6:2.98:21,3,0	./.	./.	1/1:17,0:13:5.67:34,6,0	0/1:21,1:20:37.57:97,0,38	0/1:47,3:45:65.36:97,0,65	0/0:20,0:8:2.98:0,3,21	0/1:22,3:22:11.77:213,0,12	0/1:15,0:9:6.06:21,0,6	0/1:9,0:5:17.12:19,0,17	1/1:15,0:13:2.03:5,2,0	0/1:20,0:17:11.86:87,0,12	0/0:13,0:13:0.87:0,1,2	0/1:16,0:13:0.38:15,0,0	0/1:17,2:17:15.07:175,0,15	0/1:39,8:45:99:417,0,117	1/1:13,0:13:7.62:99,8,0	0/1:18,4:18:20.81:108,0,21	0/1:23,1:17:26.80:31,0,27	0/1:59,0:36:0:0,0,0	0/1:21,0:21:4.30:87,0,4	0/0:12,0:12:2.84:0,3,9	0/1:29,0:28:4.50:7,0,4	./.	0/1:33,0:21:27.06:27,0,85	0/1:20,0:17:25.34:25,0,69	0/1:9,0:9:0.03:0,0,36
chr10	7077589	.	T	TGA	1147.70	PASS	AB=0.987;AC=26;AF=0.500;AN=52;BaseQRankSum=6.214;DP=639;FS=9.965;HRun=0;HaplotypeScore=147.3644;InbreedingCoeff=-0.0991;MQ=38.36;MQ0=53;MQRankSum=0.569;QD=2.38;ReadPosRankSum=1.799;VQSLOD=1.7977;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:43,0:37:51.15:51,0,404	0/1:8,0:7:0.54:58,0,1	./.	./.	0/1:18,0:14:2.40:18,0,2	0/0:22,0:20:5.47:0,5,320	0/0:47,0:42:32.82:0,33,562	0/1:21,0:8:25.73:31,0,26	0/1:26,0:23:59.94:60,0,124	1/1:16,0:10:11.69:128,12,0	0/1:9,0:6:32.60:33,0,47	1/1:17,0:15:0.40:36,0,0	1/1:21,1:19:2.97:182,3,0	0/1:15,0:15:8.14:38,0,8	1/1:17,0:14:5.04:42,5,0	0/1:20,0:19:43.78:44,0,96	0/1:46,0:44:99:102,0,606	1/1:14,1:15:7.51:149,8,0	0/0:24,0:18:12.71:0,13,317	0/1:27,0:20:1.22:1,0,125	0/1:58,1:37:11.19:39,0,11	0/1:23,2:25:14.24:185,0,14	1/1:13,1:14:0.85:30,1,0	0/1:27,3:29:39.25:71,0,39	0/0:22,0:17:8.19:0,8,66	0/1:35,0:23:2.79:3,0,327	0/0:20,0:17:24.01:0,24,222	0/0:11,0:10:26.52:0,27,205
chr10	7077991	.	A	AG	2042.37	PASS	AB=0.765;AC=14;AF=0.250;AN=56;BaseQRankSum=12.680;DP=573;FS=13.268;HRun=3;HaplotypeScore=106.8636;InbreedingCoeff=-0.3321;MQ=62.32;MQ0=2;MQRankSum=-10.620;QD=8.51;ReadPosRankSum=0.569;VQSLOD=0.1019;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,138,1655	0/1:3,4:7:20.95:152,0,21	0/0:36,0:31:75.21:0,75,882	0/0:20,0:17:45.12:0,45,521	0/1:25,12:37:99:222,0,341	0/0:22,0:22:60.18:0,60,720	0/0:21,0:21:60.17:0,60,709	0/1:21,5:26:99:143,0,529	0/0:20,0:20:60.18:0,60,720	0/1:8,9:17:99:290,0,199	0/1:16,4:19:87.52:88,0,258	0/1:5,4:9:99:142,0,119	0/1:10,9:19:99:321,0,227	0/1:11,3:14:91.56:92,0,201	0/1:14,6:19:99:163,0,270	0/0:22,0:22:60.18:0,60,720	0/0:17,0:17:51.11:0,51,585	0/1:9,2:11:72.78:73,0,160	0/0:15,0:13:33.07:0,33,380	0/0:22,0:22:66.19:0,66,779	0/1:10,1:11:34.10:34,0,230	0/1:10,2:12:58.39:58,0,191	0/1:10,10:20:99:322,0,156	0/1:11,6:17:98.92:99,0,156	0/0:16,0:16:41.70:0,42,490	0/0:25,0:25:75.22:0,75,891	0/0:35,0:34:99:0,105,1258	0/0:13,0:13:36.04:0,36,381
chr10	7078138	.	AG	A	2870.43	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=6.416;DP=634;FS=0.455;HRun=1;HaplotypeScore=70.9463;InbreedingCoeff=0.9999;MQ=64.85;MQ0=1;MQRankSum=-0.582;QD=38.27;ReadPosRankSum=4.140;VQSLOD=4.1948;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,108,1710	0/0:15,0:15:45.14:0,45,687	0/0:20,0:17:51.09:0,51,773	0/0:27,0:24:64.24:0,64,981	0/0:24,0:24:72.23:0,72,1079	0/0:22,0:22:66.20:0,66,1030	0/0:28,0:28:84.25:0,84,1289	0/0:32,0:32:96.31:0,96,1492	0/0:28,0:28:84.25:0,84,1269	0/0:19,0:19:57.19:0,57,910	0/0:14,0:14:42.14:0,42,655	0/0:16,0:16:48.15:0,48,744	0/0:25,0:25:75.23:0,75,1172	0/0:16,0:16:48.13:0,48,717	0/0:19,0:19:57.19:0,57,890	0/0:22,0:22:66.20:0,66,1027	0/0:30,0:30:90.26:0,90,1383	0/0:22,0:22:63.21:0,63,1006	0/0:21,0:21:63.21:0,63,1004	0/0:21,0:21:63.20:0,63,980	0/0:38,0:38:99:0,108,1638	0/0:12,0:12:36.12:0,36,571	0/0:17,0:17:45.14:0,45,662	0/0:18,0:18:48.14:0,48,742	0/0:17,0:17:51.17:0,51,813	1/1:1,29:30:42.73:1169,43,0	1/1:0,27:27:78.26:1090,78,0	1/1:0,18:18:54.18:754,54,0
chr10	7078630	.	G	GTATC	8558.79	PASS	AB=0.688;AC=47;AF=0.904;AN=52;BaseQRankSum=-0.411;DP=723;FS=3.523;HRun=0;HaplotypeScore=152.4381;InbreedingCoeff=0.6336;MQ=54.70;MQ0=8;MQRankSum=-0.848;QD=13.11;ReadPosRankSum=-1.165;VQSLOD=4.5865;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:31:8.95:0,9,400	0/0:9,0:9:15.05:0,15,232	./.	./.	1/1:18,0:37:12.82:81,13,0	1/1:16,0:17:22.74:152,23,0	1/1:21,0:20:11.04:80,11,0	1/1:39,0:39:23.95:316,24,0	1/1:33,0:33:23.20:202,23,0	1/1:24,15:42:15.44:1135,15,0	1/1:9,9:18:21.07:493,21,0	1/1:9,13:22:21.07:494,21,0	1/1:12,15:27:36.12:846,36,0	0/1:11,10:22:6.69:402,0,7	1/1:14,11:25:27.09:635,27,0	1/1:31,0:32:36.91:250,37,0	1/1:26,0:27:16.73:83,17,0	1/1:16,16:33:30.10:705,30,0	1/1:11,0:11:8.24:49,8,0	1/1:26,0:25:34.72:233,35,0	1/1:13,17:30:39.13:917,39,0	1/1:12,0:20:6.02:86,6,0	1/1:11,10:20:18.06:419,18,0	1/1:13,9:24:12.04:282,12,0	1/1:17,0:17:12.66:69,13,0	1/1:40,1:41:55.57:454,56,0	1/1:22,0:51:7.56:29,8,0	1/1:15,0:15:14.73:147,15,0
chr10	7078675	.	T	TA	1547.87	PASS	AB=0.843;AC=11;AF=0.196;AN=56;BaseQRankSum=6.604;DP=651;FS=6.564;HRun=0;HaplotypeScore=154.1149;InbreedingCoeff=-0.2445;MQ=65.39;MQ0=4;MQRankSum=-4.901;QD=6.24;ReadPosRankSum=-3.466;VQSLOD=2.4031;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:78.18:0,78,1037	0/0:11,0:11:33.10:0,33,445	0/0:25,0:20:53.90:0,54,710	0/0:22,0:20:42.81:0,43,701	0/1:28,0:28:23.37:23,0,274	0/1:17,4:21:99:196,0,319	0/1:13,4:16:18.13:18,0,218	0/0:27,0:27:76.50:0,76,1047	0/1:30,3:34:99:140,0,710	0/0:26,0:26:53.83:0,54,794	0/0:14,0:14:25.01:0,25,376	0/0:25,0:25:60.11:0,60,723	0/0:26,0:25:65.93:0,66,703	0/0:19,0:19:53.58:0,54,633	0/0:23,0:23:62.57:0,63,697	0/1:26,5:31:99:181,0,817	0/1:14,7:21:99:143,0,301	0/0:29,0:29:52.35:0,52,729	0/1:6,1:7:26.77:27,0,227	0/1:12,9:20:99:321,0,318	0/0:35,0:35:93.13:0,93,1068	0/0:14,0:14:23.78:0,24,281	0/0:11,0:10:21:0,21,197	0/0:21,0:21:44.99:0,45,500	0/1:17,2:19:99:126,0,392	0/1:23,11:34:99:459,0,741	0/0:44,0:44:21.56:0,22,860	0/1:13,2:15:62.66:63,0,304
chr10	7078719	.	TTCTA	T	8412.74	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=13.799;DP=634;FS=0.356;HRun=0;HaplotypeScore=112.6196;InbreedingCoeff=0.9996;MQ=77.10;MQ0=0;MQRankSum=-4.366;QD=58.42;ReadPosRankSum=2.764;VQSLOD=6.2404;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:96.33:0,96,2757	0/0:9,0:9:27.09:0,27,783	0/0:24,0:24:71.05:0,71,1950	0/0:19,0:19:48.61:0,49,1186	0/0:25,0:25:69.24:0,69,1929	1/1:0,18:18:48.16:1006,48,0	1/1:0,14:14:36.12:754,36,0	0/0:28,0:28:84.28:0,84,2300	1/1:0,28:29:84.29:1747,84,0	0/0:22,0:22:66.23:0,66,1835	0/0:27,0:27:81.23:0,81,2280	0/0:26,0:26:69.24:0,69,2000	0/0:21,0:21:57.20:0,57,1651	0/0:21,0:21:60.21:0,60,1702	0/0:31,0:31:87.30:0,87,2487	1/1:0,24:24:60.21:1259,60,0	1/1:0,11:11:30.10:629,30,0	0/0:24,0:24:63.20:0,63,1754	1/1:0,11:11:33.11:692,33,0	1/1:0,17:17:51.18:1069,51,0	0/0:35,0:35:96.33:0,96,2764	0/0:20,0:20:57.20:0,57,1640	0/0:12,0:12:33.11:0,33,956	0/0:27,0:27:72.25:0,72,2085	1/1:0,20:20:60.21:1257,60,0	0/0:26,0:26:75.22:0,75,2049	0/0:36,0:36:96.33:0,96,2764	0/0:22,0:22:60.14:0,60,1591
chr10	7078971	.	G	GA	459.48	PASS	AB=0.829;AC=9;AF=0.167;AN=54;BaseQRankSum=-3.942;DP=437;FS=1.492;HRun=13;HaplotypeScore=67.2967;InbreedingCoeff=0.1809;MQ=50.67;MQ0=12;MQRankSum=-1.943;QD=3.43;ReadPosRankSum=-1.607;VQSLOD=-0.0153;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:24:28.40:0,28,82	0/0:5,0:5:8.92:0,9,62	1/1:12,0:2:0.89:2,1,0	./.	0/0:20,2:24:3.38:0,3,160	0/0:18,1:20:11.89:0,12,209	0/1:8,1:11:2.12:2,0,108	0/0:16,0:16:23.57:0,24,156	0/0:7,0:7:8.90:0,9,62	0/0:8,1:9:11.76:0,12,79	0/1:19,2:22:15.64:16,0,179	0/0:10,0:10:17.77:0,18,123	0/0:6,0:7:10.90:0,11,66	0/0:15,0:15:14.78:0,15,103	0/0:11,0:15:28.41:0,28,167	0/0:14,0:14:28.71:0,29,188	0/0:21,0:23:51.32:0,51,328	0/0:22,0:22:35.43:0,35,242	0/0:24,1:27:25.71:0,26,294	0/1:28,2:31:9.01:9,0,199	0/0:6,0:7:13.89:0,14,85	0/0:6,0:7:2.07:0,2,19	0/0:10,0:10:19.86:0,20,129	0/0:9,0:9:17.41:0,17,123	0/0:16,2:17:5.52:0,6,178	0/1:9,8:15:11.42:110,0,11	1/1:3,11:14:15.72:185,16,0	0/1:12,10:21:19.69:261,0,20
chr10	7079163	.	A	AAC	325.33	PASS	AB=0.950;AC=10;AF=0.217;AN=46;BaseQRankSum=-2.465;DP=447;FS=7.850;HRun=0;HaplotypeScore=85.7785;InbreedingCoeff=0.1453;MQ=69.29;MQ0=17;MQRankSum=1.578;QD=3.19;ReadPosRankSum=-0.980;VQSLOD=1.2285;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:35:2.84:0,3,14	./.	./.	./.	0/0:17,0:16:7.76:0,8,69	0/0:11,0:14:8.52:0,9,42	0/0:15,0:19:2.84:0,3,14	./.	0/0:6,0:13:8.52:0,9,42	0/0:14,0:13:9.02:0,9,96	0/1:6,0:6:18.91:19,0,22	0/0:10,0:8:2.99:0,3,24	0/1:7,0:7:23.07:37,0,23	1/1:10,3:14:2.74:44,3,0	0/0:13,0:12:5.97:0,6,52	0/0:5,0:8:5.68:0,6,28	0/0:7,0:9:2.84:0,3,14	0/1:20,0:21:16.44:16,0,18	./.	0/0:5,0:10:0:0,0,0	0/0:25,0:24:8.21:0,8,71	1/1:7,3:10:6.02:88,6,0	1/1:7,7:14:6.02:88,6,0	0/1:21,7:27:46.15:159,0,46	0/0:10,0:11:2.74:0,3,14	0/0:16,0:15:6.01:0,6,64	0/0:10,0:13:11.96:0,12,117	0/0:17,0:15:6.01:0,6,63
chr10	7079354	.	C	CA	3425.97	PASS	AC=28;AF=0.560;AN=50;BaseQRankSum=-1.767;DP=466;FS=3.947;HRun=2;HaplotypeScore=32.8086;InbreedingCoeff=0.7481;MQ=28.09;MQ0=242;MQRankSum=-7.990;QD=16.16;ReadPosRankSum=-0.515;VQSLOD=3.2455;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:10:3.01:0,3,37	1/1:0,8:5:12.04:173,12,0	0/0:10,0:1:3:0,3,29	0/0:14,0:1:3.01:0,3,37	1/1:3,23:15:33.11:474,33,0	0/0:27,0:12:3.48:0,3,38	0/0:16,0:3:9.03:0,9,111	1/1:2,16:9:21.07:302,21,0	./.	1/1:1,20:13:39.13:561,39,0	1/1:1,19:9:24.08:345,24,0	1/1:1,11:4:9.03:129,9,0	1/1:1,7:6:12.51:173,13,0	1/1:2,12:7:12.04:172,12,0	1/1:1,10:6:15.05:216,15,0	0/0:15,0:1:3.01:0,3,37	./.	1/1:1,7:1:3.01:43,3,0	0/0:16,0:7:21.07:0,21,260	0/0:35,0:24:69.22:0,69,854	1/1:2,19:5:5.82:86,6,0	1/1:0,9:7:18.02:236,18,0	1/1:1,16:10:24.08:345,24,0	1/1:3,16:6:12.04:172,12,0	0/0:21,0:18:27.08:0,27,334	0/0:17,0:8:18.06:0,18,223	./.	0/0:16,0:8:2.91:0,3,37
chr10	7082546	.	G	GC	444.94	PASS	AB=0.541;AC=3;AF=0.071;AN=42;BaseQRankSum=-2.389;DP=430;FS=0.000;HRun=1;HaplotypeScore=38.8534;InbreedingCoeff=0.3387;MQ=32.95;MQ0=274;MQRankSum=2.629;QD=9.27;ReadPosRankSum=0.154;VQSLOD=0.7770;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:10:24.08:0,24,306	./.	0/0:14,0:2:6.01:0,6,68	0/0:20,0:5:5.69:0,6,77	./.	0/0:14,0:7:21.07:0,21,272	0/0:21,0:10:27.09:0,27,350	0/0:21,0:11:30.10:0,30,389	0/0:13,0:5:15.05:0,15,194	0/0:7,0:1:3.01:0,3,36	./.	0/0:20,0:12:21.07:0,21,264	0/0:14,0:6:15.05:0,15,194	0/0:11,0:6:18.06:0,18,230	0/0:16,0:6:18.06:0,18,225	0/0:15,0:8:18.06:0,18,233	0/0:32,0:13:21.07:0,21,272	0/0:9,0:4:9.03:0,9,117	0/0:13,0:4:12.04:0,12,156	./.	0/0:28,0:6:6.02:0,6,78	./.	0/0:4,0:1:3.01:0,3,39	0/0:26,0:7:3.01:0,3,39	./.	0/1:3,17:9:11.83:319,0,12	1/1:1,26:19:15.05:224,15,0	./.
chr10	7083005	.	T	TTG	71.82	PASS	AC=2;AF=0.111;AN=18;BaseQRankSum=-2.879;DP=443;FS=0.000;HRun=0;HaplotypeScore=34.8327;MQ=23.80;MQ0=340;MQRankSum=0.626;QD=3.12;ReadPosRankSum=1.076;VQSLOD=0.8699;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:10,0:5:15.05:0,15,187	0/0:20,0:2:2.30:0,2,8	./.	0/0:32,0:23:18.06:0,18,225	./.	./.	./.	./.	0/0:27,0:10:24.08:0,24,300	./.	./.	./.	./.	./.	./.	./.	./.	./.	0/0:18,0:11:33.11:0,33,413	./.	0/0:18,0:11:3.01:0,3,37	0/0:17,0:11:5.26:0,5,74	./.	0/0:11,0:6:12.04:0,12,150	1/1:7,16:5:9.03:148,9,0	./.	./.
chr10	7084602	.	A	AC	2351.91	PASS	AB=0.889;AC=27;AF=0.519;AN=52;BaseQRankSum=-4.372;DP=283;FS=3.951;HRun=7;HaplotypeScore=21.6214;InbreedingCoeff=0.7648;MQ=41.42;MQ0=83;MQRankSum=0.888;QD=16.00;ReadPosRankSum=-0.010;VQSLOD=2.0511;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:13:39.06:0,39,376	1/1:2,7:6:15.05:181,15,0	0/0:8,0:1:3:0,3,28	./.	1/1:2,13:12:6.02:72,6,0	0/0:14,0:12:26.98:0,27,249	0/0:10,0:8:17.96:0,18,162	1/1:3,13:12:33.07:377,33,0	0/0:10,0:6:17.97:0,18,162	1/1:3,9:10:21.06:241,21,0	1/1:1,8:7:18.06:217,18,0	1/1:1,8:4:6.02:72,6,0	1/1:2,5:5:15.04:175,15,0	1/1:1,9:8:21.06:248,21,0	1/1:1,8:7:15.05:181,15,0	0/0:11,0:7:21.03:0,21,203	0/0:15,0:10:24.04:0,24,231	1/1:1,17:14:30.09:362,30,0	0/0:4,0:3:3:0,3,29	0/0:7,0:3:9.01:0,9,86	1/1:0,9:8:18.06:217,18,0	./.	1/1:0,2:2:3.01:36,3,0	1/1:4,10:8:12.04:145,12,0	0/0:7,0:5:6:0,6,58	0/1:0,1:5:12.81:25,0,13	0/0:4,0:10:18.33:0,18,54	0/0:0,0:7:8.15:0,8,24
chr10	7084685	.	AATAATAATAATAATAATG	A	4181.28	PASS	AB=0.972;AC=33;AF=0.635;AN=52;BaseQRankSum=0.869;DP=172;FS=27.340;HRun=0;HaplotypeScore=74.0579;InbreedingCoeff=0.3691;MQ=57.32;MQ0=3;MQRankSum=-3.078;QD=37.33;ReadPosRankSum=2.638;VQSLOD=0.1911;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:12.01:0,12,289	./.	./.	0/0:4,0:2:2.69:0,3,8	1/1:6,1:7:14.95:284,15,0	0/0:9,0:9:2.27:0,2,105	0/0:2,0:2:3.01:0,3,42	1/1:12,0:12:24.03:293,24,0	0/0:6,0:6:5.22:0,5,108	1/1:8,3:11:27.07:749,27,0	1/1:10,0:10:2.10:134,2,0	1/1:0,4:4:12.04:559,12,0	1/1:0,4:4:3.01:150,3,0	1/1:1,4:5:6.02:300,6,0	1/1:2,2:4:9.03:337,9,0	1/1:5,0:5:4.07:12,4,0	0/0:14,0:14:5.38:0,5,106	0/1:10,1:10:81.13:222,0,81	0/1:12,0:11:29.75:30,0,198	0/0:1,0:1:2.97:0,3,20	1/1:3,0:3:5.85:50,6,0	1/1:0,2:2:3.01:126,3,0	1/1:1,5:6:5:272,5,0	1/1:1,0:1:3.01:34,3,0	0/0:10,0:9:11.20:0,11,186	1/1:4,0:3:9:106,9,0	1/1:6,0:6:6.02:268,6,0	0/1:5,0:5:14.96:259,0,15
chr10	7084691	.	AATAATAATAATG	A	2790.50	PASS	AB=1.000;AC=44;AF=0.917;AN=48;BaseQRankSum=-1.266;DP=166;FS=0.000;HRun=0;HaplotypeScore=62.1089;InbreedingCoeff=0.0215;MQ=54.03;MQ0=5;MQRankSum=0.368;QD=17.55;ReadPosRankSum=0.940;VQSLOD=1.2599;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:11,0:11:8:8,0,43	./.	./.	./.	1/1:7,0:7:8.94:100,9,0	1/1:3,5:8:3.01:105,3,0	1/1:2,0:2:2.98:22,3,0	0/1:9,0:9:0:1,0,0	1/1:3,3:6:3.01:105,3,0	1/1:10,0:10:12.04:303,12,0	0/1:10,0:10:0:0,0,0	1/1:4,0:4:12.04:305,12,0	1/1:4,0:4:3.01:86,3,0	1/1:4,0:4:6.02:173,6,0	1/1:4,0:4:9:193,9,0	1/1:0,5:5:6.02:210,6,0	1/1:3,10:13:3.01:105,3,0	0/1:11,0:10:15.20:15,0,64	1/1:7,6:11:17.98:277,18,0	1/1:2,0:2:3:25,3,0	1/1:3,0:3:2.92:17,3,0	1/1:2,0:2:3.01:63,3,0	1/1:6,0:6:5.64:145,6,0	./.	1/1:6,3:8:3.01:105,3,0	1/1:5,0:4:11.99:157,12,0	1/1:5,0:5:6.02:168,6,0	1/1:6,0:6:11.77:199,12,0
chr10	7084697	.	AATAATG	A	1876.14	PASS	AB=1.000;AC=41;AF=0.820;AN=50;BaseQRankSum=3.275;DP=165;FS=5.911;HRun=0;HaplotypeScore=49.6716;InbreedingCoeff=-0.1040;MQ=46.25;MQ0=7;MQRankSum=-1.692;QD=11.73;ReadPosRankSum=0.225;VQSLOD=1.2018;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,10:11:8.95:151,9,0	./.	./.	0/0:4,0:1:3:0,3,29	1/1:7,0:7:11.90:88,12,0	0/1:7,0:7:33.66:34,0,57	0/1:2,0:2:15.97:16,0,35	1/1:12,0:10:9.88:81,10,0	0/1:5,0:5:33.59:34,0,80	1/1:12,0:12:20.53:247,21,0	1/1:11,0:11:10.11:61,10,0	1/1:4,0:4:11.97:151,12,0	1/1:4,0:4:3.01:45,3,0	1/1:4,0:4:6.02:89,6,0	1/1:4,0:4:11.96:129,12,0	1/1:5,0:5:6.02:85,6,0	0/1:13,0:13:33.44:33,0,75	0/1:12,0:10:11.18:113,0,11	1/1:10,0:8:8.92:128,9,0	1/1:1,0:1:3:25,3,0	0/1:4,0:4:0.73:21,0,1	1/1:2,0:2:2.98:22,3,0	1/1:5,0:5:5.94:64,6,0	./.	0/1:9,0:8:33.57:34,0,93	1/1:5,0:4:11.99:119,12,0	1/1:0,0:4:6.02:90,6,0	1/1:5,0:7:14.87:146,15,0
chr10	7084700	.	AATGATAATAATAATG	A	2767.78	PASS	AB=1.000;AC=38;AF=0.731;AN=52;BaseQRankSum=3.170;DP=153;FS=7.627;HRun=0;HaplotypeScore=63.3744;InbreedingCoeff=0.0199;MQ=46.43;MQ0=7;MQRankSum=-2.317;QD=19.77;ReadPosRankSum=3.270;VQSLOD=0.2922;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:9.03:0,9,147	./.	./.	0/1:6,0:3:9.81:10,0,59	1/1:6,0:6:8.39:134,8,0	0/1:7,0:7:27.92:28,0,33	0/0:2,0:2:5.98:0,6,66	1/1:8,0:6:8.39:80,8,0	0/1:5,0:5:27.91:28,0,35	1/1:11,0:11:21.96:399,22,0	1/1:8,0:8:11.53:62,12,0	1/1:4,0:4:12.04:337,12,0	1/1:4,0:4:3.01:93,3,0	1/1:4,0:4:6.02:185,6,0	1/1:4,0:4:11.97:225,12,0	1/1:5,0:5:6.02:74,6,0	0/1:13,0:13:27.79:28,0,34	0/1:11,0:9:84.10:126,0,84	0/1:8,0:6:26.80:27,0,31	0/0:1,0:1:3:0,3,25	0/1:4,0:4:10.33:14,0,10	1/1:2,0:2:3.01:69,3,0	1/1:5,0:5:5.64:158,6,0	1/1:1,0:1:2.92:17,3,0	0/1:9,0:8:27.85:28,0,43	1/1:1,4:4:12.04:279,12,0	1/1:4,0:4:6.02:225,6,0	1/1:6,0:6:14.78:295,15,0
chr10	7085025	.	TG	T	3903.63	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=15.413;DP=486;FS=10.751;HRun=1;HaplotypeScore=87.2289;InbreedingCoeff=0.9386;MQ=76.04;MQ0=1;MQRankSum=-2.649;QD=15.13;ReadPosRankSum=0.469;VQSLOD=2.3587;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:63.05:0,63,682	1/1:7,0:7:17.75:91,18,0	0/0:19,0:16:15.27:0,15,221	0/0:14,0:12:29.99:0,30,325	1/1:22,0:22:54.92:291,55,0	0/0:20,0:20:33.51:0,34,574	0/0:24,0:24:67.80:0,68,739	1/1:27,1:28:81.69:605,82,0	0/0:7,0:7:21.02:0,21,224	1/1:24,0:24:62.06:408,62,0	1/1:18,0:18:52.70:335,53,0	1/1:12,0:12:34.51:206,35,0	1/1:13,1:14:34.85:201,35,0	1/1:13,0:13:36.19:218,36,0	1/1:17,2:19:48.94:358,49,0	0/0:15,0:15:45.06:0,45,494	0/0:19,0:19:54.07:0,54,584	1/1:18,0:18:48.49:286,48,0	0/0:14,0:14:40.55:0,41,399	0/0:15,0:15:33.96:0,34,384	1/1:14,0:14:39.07:230,39,0	1/1:12,0:12:4.94:151,5,0	1/1:18,1:19:48.59:321,49,0	1/1:13,0:13:36.64:203,37,0	0/0:17,0:17:42.49:0,42,476	0/1:25,0:25:1.04:1,0,460	0/0:28,0:28:50:0,50,407	0/0:14,0:14:32.65:0,33,273
chr10	7085026	.	G	GT	673.04	PASS	AB=0.600;AC=5;AF=0.089;AN=56;BaseQRankSum=-6.076;DP=492;FS=21.407;HRun=14;HaplotypeScore=99.5055;InbreedingCoeff=0.4770;MQ=75.88;MQ0=1;MQRankSum=0.375;QD=9.35;ReadPosRankSum=-4.417;VQSLOD=-0.0158;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:47.16:0,47,304	0/0:7,0:7:14.05:0,14,69	0/0:21,0:18:8.08:0,8,53	0/0:13,0:11:4.38:0,4,56	0/0:22,0:22:39.50:0,40,231	0/0:21,0:21:20.65:0,21,240	0/0:23,0:24:55.09:0,55,351	0/0:27,0:27:5.80:0,6,118	0/0:8,0:8:14.68:0,15,93	0/0:24,0:24:43.66:0,44,205	0/0:18,0:18:28.68:0,29,146	0/0:12,0:12:28.11:0,28,131	0/0:13,0:13:29.74:0,30,146	0/0:13,0:13:10.15:0,10,111	0/0:18,0:18:35.11:0,35,163	0/0:16,1:17:9.03:0,9,185	0/0:16,2:18:41.23:0,41,263	0/0:18,0:18:17.76:0,18,137	0/0:13,0:14:19.71:0,20,121	0/0:14,1:15:0.08:0,0,120	0/0:14,0:14:31.12:0,31,153	0/0:13,0:13:28.72:0,29,143	0/0:18,0:18:6:0,6,116	0/0:13,0:13:30.94:0,31,149	0/0:15,1:17:34.34:0,34,212	1/1:5,20:26:3.69:367,4,0	1/1:10,17:28:20.31:271,20,0	0/1:6,12:18:44.08:152,0,44
chr10	7085344	.	C	CA	3098.67	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-10.646;DP=663;FS=6.521;HRun=4;HaplotypeScore=62.3791;InbreedingCoeff=0.9985;MQ=80.72;MQ0=0;MQRankSum=-2.735;QD=36.89;ReadPosRankSum=2.672;VQSLOD=4.0102;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,111,1246	0/0:8,0:8:21.06:0,21,238	0/0:18,0:18:44.53:0,45,459	0/0:16,0:16:42.10:0,42,465	0/0:17,0:17:51.15:0,51,577	0/0:17,0:17:51.13:0,51,568	0/0:26,0:26:78.22:0,78,884	0/0:27,0:27:81.21:0,81,903	0/0:26,0:26:75.21:0,75,850	0/0:24,0:24:69.20:0,69,782	0/0:14,0:14:36.07:0,36,395	0/0:23,0:23:69.18:0,69,773	0/0:15,0:15:45.11:0,45,500	0/0:19,0:19:57.15:0,57,636	0/0:40,0:40:99:0,111,1239	0/0:22,0:22:66.17:0,66,737	0/0:38,0:38:99:0,108,1213	0/0:41,0:41:99:0,105,1166	0/0:26,0:26:72.18:0,72,799	0/0:20,0:20:60.17:0,60,680	0/0:19,0:19:54.13:0,54,601	0/0:19,0:19:45.12:0,45,510	0/0:23,0:23:57.14:0,57,633	0/0:22,0:22:60.17:0,60,681	0/0:20,0:20:48.13:0,48,544	1/1:0,36:36:99:1477,108,0	1/1:0,26:26:66.22:903,66,0	1/1:0,22:22:63.21:862,63,0
chr10	7085986	.	TCCAAGAAATGAGG	T	14920.83	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=15.592;DP=511;FS=7.839;HRun=0;HaplotypeScore=217.5595;InbreedingCoeff=0.9478;MQ=94.81;MQ0=0;MQRankSum=-15.253;QD=88.29;ReadPosRankSum=2.809;VQSLOD=3.8858;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,102,6638	1/1:0,7:7:18.06:736,18,0	0/0:32,0:32:93.27:0,93,3783	0/0:32,0:31:78.57:0,79,3011	1/1:1,8:9:12.04:404,12,0	0/0:21,0:21:60.19:0,60,3633	0/0:38,0:38:99:0,111,7250	1/1:0,16:16:48.15:1638,48,0	0/0:30,0:30:90.31:0,90,5848	1/1:1,17:18:42.13:1471,42,0	1/1:0,11:11:21.07:859,21,0	1/1:0,22:22:60.21:2452,60,0	1/1:0,14:14:39.13:1576,39,0	1/1:1,14:15:36.12:1427,36,0	1/1:0,17:17:45.15:1837,45,0	0/0:28,0:28:84.29:0,84,5517	0/0:23,0:23:66.21:0,66,4169	1/1:1,8:9:21.07:859,21,0	0/0:17,0:17:51.18:0,51,3292	0/0:15,0:15:45.15:0,45,2791	1/1:0,11:11:6.90:197,7,0	1/1:0,9:9:24.08:982,24,0	1/1:1,3:4:2.66:116,3,0	1/1:0,7:7:9.03:368,9,0	0/0:9,0:9:24.08:0,24,1604	0/0:15,0:15:45.15:0,45,2761	0/0:29,0:28:84.29:0,84,5346	0/0:19,0:19:57.20:0,57,3817
chr10	7086483	.	G	GA	204.59	PASS	AC=6;AF=0.115;AN=52;BaseQRankSum=3.459;DP=320;FS=7.587;HRun=7;HaplotypeScore=65.6350;InbreedingCoeff=0.6841;MQ=37.63;MQ0=46;MQRankSum=-3.184;QD=7.87;ReadPosRankSum=1.724;VQSLOD=0.3971;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:20:13.15:0,13,325	0/0:6,0:5:6.01:0,6,58	./.	./.	0/0:11,0:10:18.03:0,18,174	0/0:14,0:11:20.88:0,21,196	0/0:8,0:6:17.98:0,18,164	0/0:30,0:27:66.47:0,66,616	0/0:7,0:6:15.02:0,15,145	0/0:17,0:16:33.04:0,33,313	0/0:5,0:5:9.01:0,9,87	0/0:8,0:7:9.01:0,9,87	0/0:6,0:6:12.02:0,12,116	0/0:10,0:6:3:0,3,29	0/0:5,0:5:12.01:0,12,116	0/0:11,0:11:21.03:0,21,201	0/0:36,0:26:51.92:0,52,472	0/0:35,0:23:51.07:0,51,486	0/0:14,0:12:36.06:0,36,347	0/0:6,0:5:9.01:0,9,87	0/0:5,0:3:6.01:0,6,58	0/0:8,0:8:18.02:0,18,168	0/0:8,0:7:12.02:0,12,116	0/0:5,0:4:6.01:0,6,58	0/0:13,0:11:20.37:0,20,197	1/1:3,5:7:9.03:109,9,0	1/1:1,11:12:12.04:145,12,0	1/1:2,4:4:6.02:72,6,0
chr10	7086496	.	AAAATAAAT	A	2378.79	PASS	AC=26;AF=0.684;AN=38;BaseQRankSum=0.251;DP=271;FS=13.835;HRun=0;HaplotypeScore=76.1948;InbreedingCoeff=0.6261;MQ=34.78;MQ0=44;MQRankSum=-4.792;QD=15.65;ReadPosRankSum=2.209;VQSLOD=0.6593;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:15:23.90:344,24,0	./.	./.	./.	0/0:5,0:7:5.99:0,6,49	1/1:7,7:12:11.79:301,12,0	./.	0/0:25,0:22:8.89:0,9,83	1/1:4,1:4:3.01:75,3,0	0/0:8,0:11:11.99:0,12,108	0/0:2,0:5:2.99:0,3,24	./.	1/1:4,0:4:3.01:30,3,0	1/1:5,0:4:3.01:56,3,0	0/0:2,0:3:2.99:0,3,24	1/1:6,3:9:6.02:151,6,0	1/1:25,10:24:15.05:372,15,0	0/0:20,0:24:38.94:0,39,341	1/1:10,6:13:15.05:376,15,0	1/1:3,2:4:3.01:75,3,0	./.	./.	1/1:5,0:6:3.01:38,3,0	./.	1/1:6,6:10:12.04:301,12,0	1/1:7,0:6:12.04:209,12,0	1/1:10,0:10:12.04:193,12,0	./.
chr10	7086499	.	AT	A	342.13	PASS	AB=0.875;AC=10;AF=0.208;AN=48;BaseQRankSum=7.449;DP=249;FS=1.916;HRun=1;HaplotypeScore=54.3237;InbreedingCoeff=0.5334;MQ=33.95;MQ0=42;MQRankSum=-1.115;QD=4.17;ReadPosRankSum=1.973;VQSLOD=0.5249;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,15:16:37.64:253,38,0	./.	./.	./.	0/0:7,0:6:8.06:0,8,100	0/0:13,0:11:7.97:0,8,124	0/0:2,0:2:6.02:0,6,84	0/0:22,0:18:51.53:0,52,656	0/0:5,0:4:5.97:0,6,83	0/0:11,0:10:19.23:0,19,244	0/0:5,0:5:5.57:0,6,66	0/0:4,0:3:6.02:0,6,84	0/0:4,0:4:12.04:0,12,170	1/1:7,0:4:0.47:1,0,0	0/0:3,0:3:5.58:0,6,83	0/0:7,0:7:8.39:0,8,91	0/0:32,0:22:11.66:0,12,396	0/1:34,0:22:11.04:11,0,149	0/0:15,0:12:12.97:0,13,184	0/0:5,0:4:5.56:0,6,66	0/0:3,0:2:6.02:0,6,84	0/0:5,0:5:11.85:0,12,85	0/0:7,0:6:11.94:0,12,125	./.	0/0:12,0:10:5.52:0,6,121	1/1:1,6:6:14.85:105,15,0	1/1:1,6:7:14.87:106,15,0	0/1:4,2:4:0:0,0,0
chr10	7086503	.	AT	A	265.24	PASS	AC=8;AF=0.182;AN=44;BaseQRankSum=9.341;DP=237;FS=1.834;HRun=1;HaplotypeScore=53.3460;InbreedingCoeff=0.5219;MQ=33.29;MQ0=40;MQRankSum=-3.210;QD=6.32;ReadPosRankSum=2.822;VQSLOD=0.8312;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,9:18:44.93:252,45,0	./.	./.	./.	0/0:7,0:6:6.95:0,7,70	0/0:12,0:10:4.17:0,4,122	0/0:2,0:2:6.02:0,6,80	0/0:24,0:20:57.12:0,57,757	0/0:5,0:4:4.90:0,5,85	0/0:10,0:9:16.39:0,16,177	0/0:4,0:4:3.43:0,3,20	0/0:4,0:3:6.02:0,6,87	0/0:4,0:4:12.03:0,12,157	1/1:7,0:4:0.89:2,1,0	0/0:3,0:3:6.48:0,6,69	0/0:5,0:5:0.66:0,1,20	0/0:30,0:21:22.43:0,22,383	0/0:33,0:22:21.94:0,22,207	0/0:14,0:11:4.66:0,5,138	0/0:4,0:3:1.92:0,2,41	0/0:4,0:3:9.01:0,9,108	./.	0/0:6,0:5:8.74:0,9,50	./.	0/0:11,0:10:2.78:0,3,94	1/1:0,6:5:13.88:73,14,0	1/1:1,5:6:11.13:63,11,0	./.
chr10	7086525	.	AAAT	A	414.29	PASS	AB=0.973;AC=19;AF=0.365;AN=52;BaseQRankSum=8.256;DP=239;FS=14.562;HRun=0;HaplotypeScore=60.2730;InbreedingCoeff=-0.4812;MQ=43.87;MQ0=17;MQRankSum=-3.795;QD=2.31;ReadPosRankSum=9.106;VQSLOD=-0.6425;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:21,0:18:8.33:8,0,128	0/0:3,0:2:3.01:0,3,36	0/0:2,0:1:3.01:0,3,36	./.	0/1:7,0:6:10.49:10,0,61	0/1:9,0:8:21.62:43,0,22	0/0:2,0:2:6.02:0,6,72	0/0:25,0:23:69.06:0,69,788	0/1:2,0:2:8.61:9,0,30	0/1:7,0:6:15.69:16,0,89	0/1:4,0:4:5.23:5,0,30	0/0:2,0:2:6.02:0,6,72	0/1:3,0:3:19.49:19,0,63	0/1:5,0:4:12.25:12,0,30	0/1:2,0:2:5.23:5,0,30	0/1:4,0:4:20.24:20,0,27	0/1:31,0:25:24.41:24,0,312	0/1:24,0:20:78.86:79,0,85	0/1:17,0:14:30.80:31,0,282	1/1:2,0:2:2.84:14,3,0	0/0:3,0:3:6.02:0,6,72	./.	0/1:4,0:4:12.71:13,0,63	0/0:1,0:1:3.01:0,3,36	0/1:14,0:13:25.19:25,0,219	0/1:9,4:12:78.38:95,0,78	0/1:7,3:10:86.23:126,0,86	0/0:19,0:18:42.21:0,42,281
chr10	7086529	.	AAAT	A	784.78	PASS	AB=1.000;AC=20;AF=0.357;AN=56;BaseQRankSum=10.632;DP=246;FS=1.264;HRun=0;HaplotypeScore=57.2610;InbreedingCoeff=-0.1236;MQ=49.13;MQ0=12;MQRankSum=-3.116;QD=4.54;ReadPosRankSum=6.407;VQSLOD=0.9125;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:19:11.60:0,12,172	0/0:4,0:3:6.02:0,6,72	0/0:2,0:1:3.01:0,3,36	0/0:5,0:2:2.90:0,3,16	0/1:8,0:7:4.46:4,0,127	0/1:9,0:8:21.23:58,0,21	0/0:2,0:2:6.02:0,6,70	0/0:25,0:24:66.07:0,66,767	0/1:3,0:3:7.94:8,0,63	0/1:8,0:7:12.67:13,0,122	0/1:4,0:4:5.23:5,0,30	0/0:2,0:2:6.02:0,6,72	0/0:5,0:5:10.10:0,10,139	0/1:6,0:5:6.14:6,0,63	0/1:2,0:2:5.23:5,0,30	0/1:4,0:4:24.92:25,0,27	0/1:27,0:22:67.78:68,0,311	0/1:24,0:20:75.89:76,0,114	0/1:14,0:14:42.47:42,0,282	0/1:3,0:3:17.59:18,0,30	0/0:3,0:3:9.03:0,9,108	0/0:1,0:1:3.01:0,3,36	0/1:4,0:4:1.91:2,0,63	0/0:2,0:2:3:0,3,36	0/1:13,0:12:34.55:35,0,219	1/1:10,1:11:29.16:208,29,0	1/1:14,0:14:36.52:206,37,0	1/1:16,3:18:36.45:166,36,0
chr10	7086532	.	TAAATA	T	830.06	PASS	AB=1.000;AC=18;AF=0.321;AN=56;BaseQRankSum=10.410;DP=260;FS=7.767;HRun=0;HaplotypeScore=69.0012;InbreedingCoeff=-0.0519;MQ=52.66;MQ0=10;MQRankSum=-2.661;QD=4.66;ReadPosRankSum=5.905;VQSLOD=-0.0919;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:20:17.44:17,0,172	0/0:4,0:3:6.02:0,6,82	0/0:2,0:1:3.01:0,3,41	0/0:6,0:3:3.01:0,3,42	0/0:8,0:7:5.85:0,6,153	0/1:8,0:7:25.78:82,0,26	0/0:3,0:3:9.03:0,9,122	0/0:28,0:27:69.23:0,69,942	0/1:3,0:3:15.17:15,0,73	0/0:9,0:8:2.79:0,3,148	0/1:4,0:4:0.08:0,0,36	0/0:4,0:4:12.04:0,12,163	0/0:5,0:5:10.55:0,11,160	0/1:7,0:6:12.71:13,0,110	0/1:2,0:2:0.08:0,0,36	0/1:5,0:5:36.35:36,0,70	0/1:25,0:21:68.11:68,0,400	0/1:25,0:21:19.09:19,0,149	0/1:14,0:14:78.63:79,0,326	0/1:4,0:4:15.12:15,0,73	0/0:3,0:3:9.03:0,9,124	0/0:2,0:2:6.02:0,6,82	0/0:6,0:6:9.18:0,9,181	0/0:2,0:2:3.01:0,3,41	0/1:13,0:12:63.41:63,0,252	1/1:10,4:14:35.98:286,36,0	1/1:12,2:14:32.67:209,33,0	1/1:17,0:17:19.82:88,20,0
chr10	7086536	.	TA	T	235.59	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=4.721;DP=271;FS=1.592;HRun=4;HaplotypeScore=55.1468;InbreedingCoeff=0.6358;MQ=56.25;MQ0=6;MQRankSum=1.563;QD=5.24;ReadPosRankSum=-0.574;VQSLOD=-0.4559;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:16:32.68:0,33,331	0/0:5,0:4:9.03:0,9,122	0/0:2,0:1:3.01:0,3,41	0/0:7,0:4:3.01:0,3,42	0/0:12,0:11:27.15:0,27,286	0/0:8,0:7:9.23:0,9,56	0/0:4,0:4:9.03:0,9,122	0/0:27,0:26:78.26:0,78,1060	0/0:4,0:4:10.58:0,11,126	0/0:9,0:8:19.71:0,20,216	0/0:4,0:4:4.56:0,5,45	0/0:6,0:6:18.05:0,18,228	0/0:5,0:5:12.03:0,12,162	0/0:7,0:6:10.28:0,10,125	0/0:3,0:3:7.57:0,8,85	0/0:6,0:6:12.14:0,12,129	0/0:24,0:22:42.78:0,43,486	0/0:25,0:23:15.10:0,15,220	0/0:15,0:15:37.87:0,38,427	0/0:4,0:4:7.27:0,7,84	0/0:3,0:3:9.03:0,9,122	0/0:5,0:5:12.03:0,12,147	0/0:6,0:6:5.31:0,5,175	0/0:2,0:2:3.01:0,3,41	0/0:14,0:13:30.30:0,30,341	1/1:13,1:14:35.37:187,35,0	1/1:14,0:14:20.07:99,20,0	1/1:14,3:17:19.82:88,20,0
chr10	7087673	.	C	CCCT	11046.23	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-3.964;DP=314;FS=10.417;HRun=0;HaplotypeScore=62.9129;InbreedingCoeff=0.7623;MQ=74.82;MQ0=1;MQRankSum=-2.878;QD=37.70;ReadPosRankSum=4.931;VQSLOD=5.1909;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,17:19:30.10:619,30,0	1/1:1,4:5:8.94:136,9,0	0/0:12,0:10:14.98:0,15,221	0/0:9,0:9:9.89:0,10,147	1/1:2,9:12:17.98:309,18,0	1/1:0,4:4:6.02:123,6,0	1/1:1,16:17:30.09:618,30,0	1/1:2,11:13:34.33:592,34,0	1/1:1,7:8:12.04:240,12,0	1/1:1,13:14:39.13:779,39,0	1/1:1,8:10:21.07:416,21,0	1/1:4,11:15:26.16:647,26,0	1/1:0,12:13:23.38:489,23,0	1/1:2,6:10:18.05:367,18,0	1/1:1,9:11:17.02:427,17,0	1/1:2,8:10:21.06:409,21,0	1/1:3,15:19:23.73:493,24,0	1/1:2,3:6:6.01:121,6,0	1/1:0,8:9:27.05:478,27,0	1/1:0,7:7:11.97:204,12,0	1/1:3,14:19:33.10:656,33,0	1/1:0,6:7:9.03:186,9,0	1/1:1,6:7:15.04:309,15,0	1/1:4,13:17:33.08:680,33,0	1/1:0,8:8:18.06:371,18,0	1/1:2,7:11:17.94:334,18,0	1/1:1,15:16:35.36:733,35,0	1/1:0,6:6:15.05:309,15,0
chr10	7088768	.	T	TAAA	11018.25	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-2.549;DP=462;FS=7.282;HRun=6;HaplotypeScore=110.2913;InbreedingCoeff=0.7679;MQ=52.53;MQ0=11;MQRankSum=-0.091;QD=29.23;ReadPosRankSum=0.941;VQSLOD=2.3479;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:19,1:20:53.84:643,54,0	1/1:8,2:10:26.97:326,27,0	0/0:52,0:7:17.37:0,17,177	0/0:31,0:8:2.22:0,2,32	1/1:11,1:13:38.01:433,38,0	1/1:20,0:20:54.11:702,54,0	1/1:11,0:11:23.94:289,24,0	1/1:28,1:27:50.17:543,50,0	1/1:6,0:6:11.98:149,12,0	1/1:16,1:17:38.93:463,39,0	1/1:17,2:19:53.65:575,54,0	1/1:18,1:19:51.05:668,51,0	1/1:7,0:8:15.31:267,15,0	1/1:6,1:7:11.99:182,12,0	1/1:9,0:9:20.97:243,21,0	1/1:12,0:12:27.06:383,27,0	1/1:30,0:30:77.70:798,78,0	1/1:13,0:12:30.02:365,30,0	1/1:25,1:26:53.97:632,54,0	1/1:13,1:14:33.02:418,33,0	1/1:10,0:10:30.05:370,30,0	1/1:3,0:3:6:67,6,0	1/1:9,1:10:27.05:395,27,0	1/1:7,0:6:11.99:130,12,0	1/1:16,3:19:51.06:716,51,0	1/1:17,3:21:55.04:701,55,0	1/1:16,0:16:38.97:428,39,0	1/1:8,0:8:11.97:136,12,0
chr10	7088774	.	ATTT	A	2629.67	PASS	AB=0.973;AC=45;AF=0.804;AN=56;BaseQRankSum=-3.807;DP=449;FS=17.785;HRun=13;HaplotypeScore=132.7585;InbreedingCoeff=0.1701;MQ=56.96;MQ0=10;MQRankSum=8.978;QD=7.62;ReadPosRankSum=4.242;VQSLOD=-0.5096;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:20:9.52:162,10,0	0/1:9,0:9:1.22:43,0,1	0/0:64,0:10:24.01:0,24,279	0/0:39,0:12:26.65:0,27,353	1/1:14,0:14:3.31:90,3,0	1/1:19,0:19:19.35:190,19,0	1/1:8,1:9:10.06:110,10,0	1/1:19,6:24:11.63:211,12,0	0/1:4,0:4:3.10:8,0,3	1/1:16,1:17:9.03:144,9,0	1/1:17,2:19:2.07:137,2,0	1/1:18,1:19:21.43:180,21,0	0/1:8,0:8:23.87:56,0,24	1/1:3,1:5:11.51:88,12,0	1/1:7,2:9:6.39:125,6,0	1/1:10,0:10:9.41:69,9,0	0/1:26,2:28:15.05:153,0,15	1/1:10,0:10:8.48:90,8,0	1/1:19,2:21:17.56:203,18,0	0/1:12,1:13:1.44:71,0,1	1/1:10,0:10:22.82:121,23,0	1/1:2,0:2:1.33:14,1,0	0/1:10,0:10:3.83:15,0,4	1/1:6,0:6:6.68:36,7,0	1/1:19,1:20:29.75:271,30,0	0/1:18,1:19:33.13:56,0,33	1/1:13,0:13:6.29:67,6,0	1/1:5,0:5:8.38:64,8,0
chr10	7089479	.	G	GACAC	2723.23	PASS	AB=0.784;AC=30;AF=0.600;AN=50;BaseQRankSum=-5.079;DP=654;FS=4.673;HRun=0;HaplotypeScore=171.8578;InbreedingCoeff=0.0329;MQ=58.64;MQ0=20;MQRankSum=4.680;QD=6.22;ReadPosRankSum=-0.836;VQSLOD=2.6136;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:24,3:32:20.50:161,0,21	0/0:4,0:10:12.01:0,12,112	./.	./.	0/0:9,0:16:5.86:0,6,56	1/1:11,0:15:8.37:95,8,0	0/1:18,5:25:34.36:129,0,34	1/1:25,0:23:0.47:1,0,0	1/1:15,7:24:15.05:353,15,0	0/0:23,0:32:27.03:0,27,251	0/0:10,0:23:15.02:0,15,140	1/1:21,0:21:3.01:44,3,0	1/1:11,1:14:6.02:108,6,0	1/1:13,0:17:6.02:104,6,0	0/0:9,0:20:24.03:0,24,223	0/1:11,17:30:8.05:636,0,8	0/1:20,9:32:99:259,0,138	1/1:11,0:12:0.47:1,0,0	0/1:14,0:14:57.88:62,0,58	0/1:18,4:26:33.32:209,0,33	./.	1/1:28,0:28:11.97:157,12,0	1/1:14,0:12:8.83:167,9,0	1/1:19,0:19:8.55:164,9,0	0/1:18,6:27:34.82:123,0,35	0/1:18,0:20:54.33:54,0,101	0/1:17,0:27:42.52:43,0,143	0/1:6,0:9:14.89:15,0,38
chr10	7089887	.	CG	C	1280.06	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.934;DP=662;FS=2.977;HRun=3;HaplotypeScore=68.5289;InbreedingCoeff=0.9843;MQ=82.78;MQ0=0;MQRankSum=-4.854;QD=32.00;ReadPosRankSum=0.917;VQSLOD=3.9820;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,38:40:99:1375,111,0	0/0:5,0:5:15.05:0,15,216	0/0:20,0:20:54.13:0,54,717	0/0:20,0:19:41.68:0,42,623	0/0:16,0:16:42.14:0,42,598	0/0:18,0:18:51.17:0,51,731	0/0:19,0:19:51.16:0,51,711	0/0:28,0:28:78.25:0,78,1107	0/0:14,0:14:39.13:0,39,561	0/0:23,0:23:63.19:0,63,878	0/0:16,0:16:45.14:0,45,629	0/0:30,0:30:90.30:0,90,1295	0/0:25,0:25:75.21:0,75,1041	0/0:20,0:20:60.20:0,60,858	0/0:30,0:30:90.25:0,90,1222	0/0:31,0:31:90.28:0,90,1262	0/0:42,0:42:99:0,126,1768	0/0:17,0:17:48.13:0,48,669	0/0:31,0:31:90.29:0,90,1274	0/0:16,0:16:42.14:0,42,603	0/0:35,0:35:99:0,102,1406	0/0:31,0:31:78.25:0,78,1099	0/0:22,0:21:54.18:0,54,770	0/0:31,0:31:93.29:0,93,1303	0/0:23,0:23:66.21:0,66,931	0/0:27,0:27:75.25:0,75,1070	0/0:17,0:17:51.17:0,51,732	0/0:15,0:14:42.13:0,42,585
chr10	7090008	.	GCC	G	21710.78	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-7.402;DP=665;FS=4.405;HRun=6;HaplotypeScore=91.4876;InbreedingCoeff=0.9945;MQ=80.70;MQ0=4;MQRankSum=-9.483;QD=34.46;ReadPosRankSum=5.764;VQSLOD=4.4149;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,55:58:99:2161,163,0	1/1:0,9:9:27.09:360,27,0	0/0:20,0:20:55.17:0,55,894	0/0:14,0:15:39.05:0,39,596	1/1:0,17:16:42.14:560,42,0	1/1:1,18:18:48.16:640,48,0	1/1:0,26:26:78.26:1040,78,0	1/1:4,26:30:63.17:811,63,0	1/1:1,16:17:45.15:599,45,0	1/1:1,17:18:45.14:600,45,0	1/1:3,13:16:30.10:400,30,0	1/1:2,24:26:66.22:880,66,0	1/1:1,18:19:51.17:680,51,0	1/1:5,18:23:60.18:785,60,0	1/1:0,26:25:72.24:960,72,0	1/1:0,15:15:45.15:600,45,0	1/1:2,31:33:90.29:1201,90,0	1/1:2,34:36:96.32:1280,96,0	1/1:3,19:22:57.19:758,57,0	1/1:0,21:21:51.16:680,51,0	1/1:1,55:56:99:2000,150,0	1/1:3,18:21:44.85:599,45,0	1/1:1,13:14:27.09:360,27,0	1/1:1,29:30:81.27:1081,81,0	1/1:1,21:22:54.18:720,54,0	1/1:3,21:24:54.17:719,54,0	1/1:0,26:25:75.25:997,75,0	1/1:0,6:6:18.06:240,18,0
chr10	7092003	.	AGG	A	1445.87	PASS	AB=0.853;AC=20;AF=0.357;AN=56;BaseQRankSum=10.279;DP=702;FS=56.992;HRun=2;HaplotypeScore=404.4891;InbreedingCoeff=-0.5394;MQ=40.02;MQ0=16;MQRankSum=-8.771;QD=2.96;ReadPosRankSum=-6.868;VQSLOD=-0.7651;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:66.09:0,66,1268	0/1:15,2:15:4.45:4,0,465	0/0:29,0:18:54.18:0,54,1054	0/0:17,0:14:32.30:0,32,566	0/1:14,9:23:99:199,0,436	0/1:11,8:19:99:202,0,362	0/1:20,5:23:99:114,0,831	0/1:29,6:31:99:181,0,1019	0/0:33,3:36:20.20:0,20,1414	0/1:33,7:38:99:123,0,1351	0/1:18,1:18:11.06:11,0,612	0/0:27,0:25:54.71:0,55,1109	0/1:24,3:26:26.16:26,0,874	0/1:32,4:35:28.92:29,0,1312	0/1:41,6:44:56.28:56,0,1603	0/0:33,1:33:68.98:0,69,1535	0/0:16,1:17:0.41:0,0,537	0/1:8,4:11:99:113,0,190	0/1:14,1:15:1.62:2,0,283	0/1:29,7:35:92.88:93,0,1279	0/1:8,2:9:99:103,0,125	0/1:16,4:20:50.87:51,0,673	0/1:18,3:21:73.87:74,0,639	0/1:12,3:14:75.99:76,0,238	0/1:20,3:24:8.85:9,0,880	0/1:30,6:36:95.86:96,0,1144	0/0:27,0:27:80.96:0,81,1302	0/1:10,1:11:37.91:38,0,310
chr10	7092012	.	G	GAA	19806.26	PASS	AB=0.763;AC=39;AF=0.696;AN=56;BaseQRankSum=2.562;DP=720;FS=7.093;HRun=2;HaplotypeScore=386.0147;InbreedingCoeff=0.0257;MQ=35.55;MQ0=17;MQRankSum=-0.937;QD=30.95;ReadPosRankSum=10.800;VQSLOD=2.2112;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:62.80:0,63,891	1/1:5,12:15:1.19:507,1,0	0/0:34,0:20:54.15:0,54,758	0/0:15,0:11:14.85:0,15,197	0/1:16,8:24:37.76:549,0,38	0/1:16,8:24:57.19:589,0,57	0/1:20,7:25:50.31:692,0,50	0/1:32,2:30:99:516,0,150	1/1:10,25:34:99:1517,102,0	0/1:23,20:41:18.95:1393,0,19	1/1:6,14:19:35.92:735,36,0	1/1:6,21:25:52.84:1092,53,0	1/1:9,17:25:39.63:981,40,0	1/1:18,21:38:46.14:1376,46,0	1/1:23,22:42:74.32:1546,74,0	0/1:15,19:33:15.38:1123,0,15	0/1:12,5:17:29.64:308,0,30	1/1:10,1:10:18.99:187,19,0	0/1:10,4:14:97.86:252,0,98	1/1:18,16:33:37.21:1056,37,0	0/1:8,2:9:14.15:50,0,14	1/1:12,11:24:19.46:813,19,0	1/1:10,9:19:7.87:549,8,0	0/1:11,6:16:22.90:248,0,23	1/1:11,13:24:4.41:846,4,0	1/1:13,24:37:59.04:1505,59,0	1/1:6,20:26:30.23:1081,30,0	0/1:7,5:12:54.83:298,0,55
chr10	7092014	.	AGG	A	14245.93	PASS	AB=0.885;AC=43;AF=0.768;AN=56;BaseQRankSum=2.375;DP=692;FS=7.487;HRun=2;HaplotypeScore=396.7682;InbreedingCoeff=0.2497;MQ=35.16;MQ0=17;MQRankSum=-1.096;QD=23.24;ReadPosRankSum=4.273;VQSLOD=2.9384;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:65.52:0,66,1170	1/1:16,1:15:23.88:428,24,0	0/0:37,0:20:54.15:0,54,952	0/0:12,0:9:17.86:0,18,314	1/1:22,2:24:11.86:555,12,0	1/1:23,1:24:15.51:639,16,0	0/1:20,7:25:9.42:478,0,9	0/1:22,9:27:79.78:400,0,80	1/1:29,5:33:73.09:1071,73,0	1/1:35,6:39:47.13:942,47,0	1/1:16,3:18:44.04:626,44,0	1/1:23,4:25:27.65:649,28,0	1/1:23,2:24:47.37:694,47,0	1/1:34,4:37:62.05:937,62,0	1/1:35,9:41:81.67:1305,82,0	1/1:29,5:33:27.65:747,28,0	0/1:12,1:13:25.21:203,0,25	1/1:8,1:8:4.35:90,4,0	0/1:13,0:13:81.50:198,0,82	1/1:29,3:31:55.90:852,56,0	0/1:9,1:9:35.09:35,0,63	1/1:21,3:24:0.63:574,1,0	1/1:15,2:17:20.74:378,21,0	0/1:13,1:13:40.71:41,0,74	0/1:19,4:23:11.34:551,0,11	1/1:34,2:36:61.03:908,61,0	1/1:23,2:25:45.76:732,46,0	1/1:12,0:12:9.29:211,9,0
chr10	7092015	.	G	GGAAGGAA	32199.74	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=7.682;DP=723;FS=93.406;HRun=0;HaplotypeScore=425.4391;InbreedingCoeff=0.9611;MQ=34.47;MQ0=17;MQRankSum=-1.527;QD=50.08;ReadPosRankSum=7.074;VQSLOD=2.0084;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:55.33:0,55,959	1/1:15,3:16:45.15:894,45,0	0/0:39,0:20:36.03:0,36,686	0/0:11,0:8:15.01:0,15,286	1/1:26,0:26:41.32:1017,41,0	1/1:25,2:27:75.09:1259,75,0	1/1:25,1:24:33.22:899,33,0	1/1:33,0:29:28.98:839,29,0	1/1:31,4:34:68.91:2013,69,0	1/1:39,6:43:83.43:2724,83,0	1/1:20,1:20:39.54:1012,40,0	1/1:25,4:27:50.12:1635,50,0	1/1:25,1:25:69.19:1596,69,0	1/1:31,5:36:84.73:2173,85,0	1/1:41,5:43:66.95:2099,67,0	1/1:27,6:33:75.89:1882,76,0	1/1:14,1:15:10.28:455,10,0	1/1:8,1:8:18.01:406,18,0	1/1:12,1:13:18.44:451,18,0	1/1:31,4:35:81.49:1691,81,0	1/1:12,0:11:11.86:341,12,0	1/1:23,2:26:52.50:1243,52,0	1/1:14,3:17:36.96:991,37,0	1/1:12,3:14:27.05:465,27,0	1/1:23,2:25:28.64:1285,29,0	1/1:28,8:36:85.15:2565,85,0	1/1:21,3:24:60.61:1527,61,0	1/1:9,3:12:36.12:737,36,0
chr10	7092019	.	G	GGAA	15665.71	PASS	AB=0.969;AC=42;AF=0.750;AN=56;BaseQRankSum=10.205;DP=728;FS=14.674;HRun=0;HaplotypeScore=437.4477;InbreedingCoeff=0.2250;MQ=33.69;MQ0=17;MQRankSum=-1.090;QD=24.21;ReadPosRankSum=12.377;VQSLOD=3.5222;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:62.86:0,63,863	1/1:19,0:17:16.31:439,16,0	0/0:37,0:19:39.04:0,39,585	0/0:13,0:10:21:0,21,281	1/1:26,0:26:0.72:411,1,0	1/1:25,1:26:51.55:548,52,0	0/1:25,1:24:25.21:383,0,25	0/1:33,0:29:41.05:41,0,180	1/1:34,1:35:51.16:1077,51,0	1/1:43,2:44:33.34:1243,33,0	1/1:20,2:21:34.88:632,35,0	1/1:29,1:28:26.43:900,26,0	1/1:25,1:25:64.81:902,65,0	1/1:35,4:38:78.96:1291,79,0	1/1:42,2:41:29.34:1024,29,0	1/1:32,1:32:52.32:876,52,0	0/1:16,0:16:57.53:177,0,58	0/1:9,0:8:3:103,0,3	0/1:13,0:13:80.78:172,0,81	1/1:30,3:33:60.91:888,61,0	0/1:11,1:11:35.93:61,0,36	1/1:26,1:27:42.83:639,43,0	1/1:16,1:17:5.14:458,5,0	0/1:15,1:15:15.27:163,0,15	0/1:24,2:26:7.59:630,0,8	1/1:32,3:35:67.62:1321,68,0	1/1:24,1:25:36.90:947,37,0	1/1:12,0:12:35.26:340,35,0
chr10	7092022	.	AG	A	5167.02	PASS	AB=0.805;AC=30;AF=0.536;AN=56;BaseQRankSum=11.681;DP=722;FS=36.967;HRun=2;HaplotypeScore=448.7220;InbreedingCoeff=-0.3993;MQ=32.50;MQ0=16;MQRankSum=-0.847;QD=8.01;ReadPosRankSum=9.398;VQSLOD=1.7060;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:30:64.71:0,65,869	0/1:11,8:17:21.01:187,0,21	0/0:33,1:17:42.06:0,42,595	0/0:12,0:9:21.07:0,21,309	0/1:18,8:26:45.13:129,0,45	0/1:21,5:26:33.48:199,0,33	0/1:21,4:24:99:161,0,101	0/1:32,2:30:6.10:6,0,282	0/1:17,19:35:24.93:386,0,25	0/1:37,10:45:99:287,0,228	1/1:13,9:21:17.96:287,18,0	0/1:13,15:28:78.25:303,0,78	1/1:12,13:25:16.22:285,16,0	1/1:28,12:39:28.44:493,28,0	0/1:30,13:41:34.33:291,0,34	0/1:21,12:32:96.01:213,0,96	0/1:13,3:16:99:102,0,105	0/1:9,0:8:11.31:11,0,33	0/1:8,3:11:40.03:40,0,134	0/1:24,8:32:13.04:334,0,13	0/1:10,0:10:0.29:0,0,91	0/1:20,8:28:53.58:194,0,54	0/1:13,5:18:12.15:135,0,12	0/1:14,2:15:47.34:47,0,77	0/1:17,9:26:68.11:173,0,68	0/1:23,12:35:36.23:358,0,36	1/1:10,15:25:6.49:439,6,0	1/1:12,2:14:5.94:107,6,0
chr10	7092036	.	GACA	G	5229.96	PASS	AB=0.841;AC=26;AF=0.464;AN=56;BaseQRankSum=10.815;DP=645;FS=13.402;HRun=0;HaplotypeScore=416.6095;InbreedingCoeff=-0.6817;MQ=39.61;MQ0=2;MQRankSum=-0.559;QD=9.11;ReadPosRankSum=11.369;VQSLOD=1.9825;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:33:43.51:0,44,522	0/1:10,5:15:98.14:196,0,98	0/0:25,0:12:33.09:0,33,689	0/0:12,0:10:18.06:0,18,411	0/1:20,6:26:80.09:268,0,80	0/1:24,4:28:0.90:340,0,1	0/1:17,0:17:47.91:48,0,206	0/1:19,0:19:9.69:10,0,394	0/1:14,14:27:99:324,0,212	0/1:34,9:43:99:385,0,201	1/1:12,7:19:41.99:303,42,0	0/1:15,10:25:99:198,0,146	0/1:13,9:22:56.78:228,0,57	0/1:27,5:32:99:374,0,119	0/1:22,12:34:99:422,0,164	0/1:24,9:33:99:264,0,314	0/1:19,1:21:32.80:86,0,33	0/1:9,0:9:39.68:40,0,163	0/1:7,3:10:95.07:118,0,95	0/1:26,4:30:74.39:321,0,74	0/1:13,0:15:21.69:22,0,200	0/1:19,4:23:99:221,0,116	0/1:15,4:19:99:110,0,140	0/1:15,1:16:41.95:42,0,51	0/1:15,7:22:99:186,0,99	0/1:24,8:32:99:333,0,349	0/1:12,8:20:55.38:196,0,55	0/1:15,1:16:58.93:196,0,59
chr10	7092038	.	CAGAAAGAAAGAA	C	27835.28	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=5.192;DP=650;FS=9.600;HRun=0;HaplotypeScore=433.6986;InbreedingCoeff=0.8429;MQ=40.22;MQ0=3;MQRankSum=-3.865;QD=48.41;ReadPosRankSum=6.176;VQSLOD=3.0347;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:35:17.82:0,18,272	1/1:8,8:16:31.75:1002,32,0	0/0:27,0:13:18:0,18,500	0/0:11,0:10:4.15:0,4,730	1/1:8,19:27:50.82:1574,51,0	1/1:8,20:28:60.21:2047,60,0	1/1:7,10:17:18.04:595,18,0	1/1:14,4:18:33.06:754,33,0	1/1:21,8:28:44.43:1212,44,0	1/1:20,24:44:97.28:2495,97,0	1/1:10,10:20:39.13:1023,39,0	1/1:14,11:25:32.35:892,32,0	1/1:12,10:22:41.26:1137,41,0	1/1:14,17:31:53.47:1686,53,0	1/1:19,15:34:65.09:1951,65,0	1/1:16,16:32:45.99:1443,46,0	1/1:6,15:21:14.86:502,15,0	1/1:6,3:9:14.91:362,15,0	1/1:4,6:10:26.91:596,27,0	1/1:10,18:28:56.76:1723,57,0	1/1:7,8:15:4.69:204,5,0	1/1:8,16:24:41.73:1229,42,0	1/1:10,9:19:16.92:547,17,0	1/1:6,10:16:5.90:423,6,0	1/1:10,11:21:32.26:1091,32,0	1/1:19,14:33:66.03:1568,66,0	1/1:13,7:20:29.76:771,30,0	1/1:4,12:16:30.10:1010,30,0
chr10	7092054	.	AAGAAAGAC	A	9272.08	PASS	AB=1.000;AC=34;AF=0.607;AN=56;BaseQRankSum=13.787;DP=582;FS=8.908;HRun=0;HaplotypeScore=377.1537;InbreedingCoeff=-0.3026;MQ=46.10;MQ0=3;MQRankSum=-13.967;QD=16.95;ReadPosRankSum=14.465;VQSLOD=0.6459;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:2,34:36:44.94:925,45,0	0/1:14,0:14:1.98:307,0,2	0/0:21,0:12:21.95:0,22,429	0/0:14,0:13:36.09:0,36,639	0/1:28,0:28:33.57:461,0,34	1/1:27,0:27:23.12:666,23,0	0/1:15,0:15:35.12:179,0,35	0/1:24,0:24:99:174,0,213	1/1:24,0:23:23.76:359,24,0	0/1:34,0:34:19.55:689,0,20	0/1:18,0:18:43.10:266,0,43	0/1:25,0:25:42.21:268,0,42	1/1:19,0:19:37.74:373,38,0	1/1:22,0:22:51.91:572,52,0	1/1:29,0:29:22.81:616,23,0	0/1:28,0:28:16.15:455,0,16	0/1:20,0:20:29.01:145,0,29	0/1:8,0:8:85.92:87,0,86	0/1:10,0:10:30.48:138,0,30	0/1:24,0:24:28.76:513,0,29	0/1:14,0:14:52.85:58,0,53	0/1:21,0:21:13.88:367,0,14	0/1:15,0:15:1.40:166,0,1	0/1:15,0:15:29.94:148,0,30	1/1:19,0:19:33.06:381,33,0	0/1:25,0:25:99:408,0,106	1/1:15,0:15:29.74:259,30,0	0/1:18,0:18:66.92:291,0,67
chr10	7092784	.	CT	C	5923.68	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=1.493;DP=485;FS=1.221;HRun=1;HaplotypeScore=82.6251;InbreedingCoeff=0.8539;MQ=71.07;MQ0=3;MQRankSum=-3.999;QD=15.55;ReadPosRankSum=-1.869;VQSLOD=4.2006;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:93.12:0,93,1117	1/1:0,11:11:3:27,3,0	0/0:36,0:23:64.92:0,65,777	0/0:37,0:28:56.11:0,56,701	1/1:0,10:10:11.68:77,12,0	1/1:17,1:18:22.64:205,23,0	1/1:12,4:15:33.31:256,33,0	1/1:2,12:14:32.08:254,32,0	1/1:11,4:15:33.61:280,34,0	1/1:12,3:15:38.66:320,39,0	1/1:8,1:9:6.08:124,6,0	1/1:0,26:26:11.03:131,11,0	1/1:11,7:18:49.17:430,49,0	1/1:13,11:24:50.96:453,51,0	1/1:10,2:12:29.64:236,30,0	1/1:10,5:15:36.83:306,37,0	1/1:10,2:12:22.69:171,23,0	1/1:10,2:12:19.94:149,20,0	1/1:1,15:16:40.41:307,40,0	1/1:1,7:8:14.82:99,15,0	1/1:25,5:30:46.04:377,46,0	1/1:1,17:18:9.84:86,10,0	1/1:13,2:15:12.78:208,13,0	1/1:10,12:22:59.59:547,60,0	1/1:13,1:14:25.64:211,26,0	1/1:6,7:11:31.23:287,31,0	1/1:5,3:8:20.93:175,21,0	1/1:3,7:10:25.43:213,25,0
chr10	7092791	.	CCCT	C	2562.12	PASS	AB=0.990;AC=36;AF=0.643;AN=56;BaseQRankSum=2.452;DP=509;FS=35.115;HRun=0;HaplotypeScore=104.9219;InbreedingCoeff=0.0098;MQ=67.90;MQ0=7;MQRankSum=-0.839;QD=6.91;ReadPosRankSum=1.765;VQSLOD=1.3192;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:81.75:0,82,1785	1/1:10,0:10:2.04:6,2,0	0/0:45,0:26:70.28:0,70,1231	0/0:51,0:35:70.94:0,71,1206	0/1:13,0:13:15.01:19,0,15	0/1:18,0:18:11.34:11,0,105	0/1:19,0:18:54.88:94,0,55	1/1:11,0:10:8.18:101,8,0	0/1:14,0:14:96.41:114,0,96	1/1:12,0:12:4.29:32,4,0	0/1:10,0:10:17.26:17,0,51	1/1:21,2:23:14.61:185,15,0	1/1:15,2:17:19.58:284,20,0	1/1:25,1:26:22.96:280,23,0	0/1:13,1:14:33.21:87,0,33	0/1:15,1:16:14.59:75,0,15	0/1:16,0:16:35.83:41,0,36	0/1:11,0:11:5.45:5,0,102	0/1:15,0:14:8.16:8,0,32	1/1:9,0:9:3.35:26,3,0	0/1:28,0:28:7.13:122,0,7	1/1:16,0:16:5.47:86,5,0	0/1:14,0:14:15.95:16,0,39	1/1:27,0:27:44.09:573,44,0	0/0:12,0:12:5.96:0,6,43	1/1:13,0:11:7.55:222,8,0	1/1:8,0:8:5.47:92,5,0	1/1:8,3:11:13.76:238,14,0
chr10	7092792	.	CCT	C	2663.18	PASS	AB=0.909;AC=46;AF=0.852;AN=54;BaseQRankSum=2.156;DP=477;FS=16.349;HRun=0;HaplotypeScore=90.3551;InbreedingCoeff=0.5339;MQ=68.72;MQ0=8;MQRankSum=-2.584;QD=7.93;ReadPosRankSum=-0.874;VQSLOD=2.0242;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:84.26:0,84,1438	1/1:11,0:11:6:65,6,0	0/0:47,0:26:65.82:0,66,970	0/0:54,0:35:67.61:0,68,954	1/1:12,0:12:3:26,3,0	1/1:14,0:14:6.01:66,6,0	1/1:17,2:18:14.93:124,15,0	1/1:8,1:8:12.01:109,12,0	1/1:11,3:14:7.97:92,8,0	1/1:11,0:11:10.20:98,10,0	1/1:11,0:11:9:80,9,0	1/1:22,2:24:17.81:162,18,0	1/1:12,3:15:21.02:202,21,0	1/1:15,8:23:24.42:220,24,0	1/1:9,1:10:9:84,9,0	1/1:15,0:15:12.02:135,12,0	1/1:13,0:13:12.47:116,12,0	1/1:11,0:11:5.99:50,6,0	0/1:15,0:14:2.84:21,0,3	1/1:9,0:9:6:51,6,0	1/1:25,0:25:15.20:133,15,0	1/1:11,4:15:8.98:84,9,0	0/1:7,1:9:9.33:20,0,9	1/1:14,10:24:46.29:417,46,0	./.	1/1:9,2:9:21.03:202,21,0	1/1:4,2:6:5.67:58,6,0	1/1:7,3:10:21.90:200,22,0
chr10	7092793	.	CT	C	2690.60	PASS	AB=0.979;AC=46;AF=0.821;AN=56;BaseQRankSum=2.641;DP=406;FS=15.950;HRun=1;HaplotypeScore=71.7068;InbreedingCoeff=0.5474;MQ=69.33;MQ0=9;MQRankSum=-2.850;QD=9.89;ReadPosRankSum=-1.078;VQSLOD=-0.1651;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:87.07:0,87,1168	1/1:8,1:9:5.99:51,6,0	0/0:49,0:25:64.49:0,64,795	0/0:55,0:36:54.02:0,54,823	1/1:12,1:13:8.99:75,9,0	0/1:10,1:11:1.28:43,0,1	1/1:12,2:13:15.41:121,15,0	1/1:8,0:7:12.46:106,12,0	1/1:11,1:12:9.83:103,10,0	1/1:5,2:7:11.81:109,12,0	0/1:8,0:8:3.09:69,0,3	1/1:14,2:17:17.87:139,18,0	1/1:11,1:12:24.33:197,24,0	1/1:15,0:15:26.88:222,27,0	1/1:9,0:9:10.69:78,11,0	1/1:5,3:8:14.61:101,15,0	1/1:9,2:11:17.92:140,18,0	1/1:8,2:10:9.46:75,9,0	1/1:13,2:14:14.11:82,14,0	1/1:7,1:8:6:51,6,0	1/1:14,4:18:20.97:176,21,0	1/1:11,0:11:8.97:76,9,0	0/1:7,0:7:11.59:17,0,12	1/1:17,1:19:47.49:395,47,0	0/1:4,0:4:0:0,0,0	1/1:10,1:9:21.02:195,21,0	1/1:3,1:4:5.98:49,6,0	1/1:10,1:11:20.36:174,20,0
chr10	7095500	.	AG	A	19763.85	PASS	AB=1.000;AC=51;AF=0.911;AN=56;BaseQRankSum=1.741;DP=611;FS=20.613;HRun=2;HaplotypeScore=76.3264;InbreedingCoeff=0.7828;MQ=72.72;MQ0=0;MQRankSum=-3.679;QD=34.86;ReadPosRankSum=3.717;VQSLOD=3.0942;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,99,1481	1/1:1,13:14:39.13:506,39,0	0/0:9,0:9:15.05:0,15,214	0/1:15,0:14:13.81:14,0,163	1/1:0,32:32:84.27:1090,84,0	1/1:0,16:16:41.75:544,42,0	1/1:0,16:16:45.15:584,45,0	1/1:0,37:37:99:1413,111,0	1/1:0,16:16:39.13:506,39,0	1/1:0,30:30:90.29:1168,90,0	1/1:2,21:23:63.20:816,63,0	1/1:0,20:20:57.19:739,57,0	1/1:1,24:25:60.19:779,60,0	1/1:0,18:18:54.18:701,54,0	1/1:0,19:19:54.18:701,54,0	1/1:1,22:23:57.19:740,57,0	1/1:0,31:31:81.26:1051,81,0	1/1:0,16:16:39.13:506,39,0	1/1:0,20:20:57.19:740,57,0	1/1:0,24:24:72.23:935,72,0	1/1:1,27:28:75.24:974,75,0	1/1:0,18:18:54.18:701,54,0	1/1:0,24:24:60.20:778,60,0	1/1:0,14:14:39.13:506,39,0	1/1:0,27:27:78.25:1013,78,0	1/1:0,27:27:81.26:1051,81,0	1/1:1,18:19:54.18:701,54,0	1/1:0,15:15:39.13:506,39,0
chr10	7095910	.	C	CT	5401.06	PASS	AB=0.917;AC=19;AF=0.339;AN=56;BaseQRankSum=-9.528;DP=685;FS=3.817;HRun=10;HaplotypeScore=66.0663;InbreedingCoeff=0.9127;MQ=71.46;MQ0=0;MQRankSum=0.113;QD=21.52;ReadPosRankSum=2.587;VQSLOD=5.9967;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,1:30:39.92:0,40,535	0/0:5,0:5:14.98:0,15,123	0/0:14,0:14:20.97:0,21,172	0/0:16,0:18:40.01:0,40,306	0/0:35,0:37:99:0,103,818	0/0:24,1:26:38.93:0,39,509	0/0:26,0:28:75.98:0,76,603	0/0:34,0:35:75.91:0,76,596	0/0:22,0:22:56.92:0,57,468	0/0:40,0:42:99:0,104,838	0/0:23,0:24:58.74:0,59,473	1/1:3,14:17:14.45:359,14,0	1/1:1,15:17:47.95:494,48,0	1/1:4,19:24:16.65:559,17,0	0/0:28,0:28:74.89:0,75,613	0/0:14,0:14:38.94:0,39,320	0/0:24,0:24:65.92:0,66,542	0/1:20,2:22:26.53:27,0,359	0/0:22,0:22:36.82:0,37,298	0/0:29,1:30:42.92:0,43,558	0/0:20,0:20:50.93:0,51,418	1/1:7,18:25:29.49:519,29,0	1/1:6,22:29:66:686,66,0	1/1:3,20:23:54.14:576,54,0	0/0:14,0:14:35.92:0,36,293	1/1:7,30:37:85.07:888,85,0	1/1:2,30:33:75.01:775,75,0	1/1:7,17:24:29.49:519,29,0
chr10	7096413	.	GT	G	6186.99	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=15.247;DP=700;FS=6.739;HRun=4;HaplotypeScore=75.2259;InbreedingCoeff=0.9974;MQ=98.73;MQ0=0;MQRankSum=-6.574;QD=30.78;ReadPosRankSum=5.460;VQSLOD=5.0009;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,160,2193	0/0:12,0:12:33.10:0,33,445	0/0:36,0:36:93.17:0,93,1212	0/0:36,0:36:99:0,102,1368	0/0:17,0:17:51.15:0,51,682	0/0:21,0:21:63.20:0,63,867	0/0:25,0:25:69.23:0,69,958	0/0:30,0:30:84.28:0,84,1173	0/0:22,0:22:63.21:0,63,882	0/0:26,0:26:78.25:0,78,1076	0/0:14,0:14:39.13:0,39,546	1/1:1,17:18:48.15:572,48,0	1/1:0,18:18:48.03:576,48,0	1/1:2,29:31:75.11:900,75,0	0/0:23,0:23:69.22:0,69,951	0/0:18,0:18:54.17:0,54,741	0/0:42,0:42:99:0,123,1716	0/0:27,0:27:78.26:0,78,1081	0/0:22,0:22:66.18:0,66,858	0/0:20,0:20:51.17:0,51,714	0/0:42,0:42:99:0,111,1535	1/1:3,24:27:66.20:791,66,0	1/1:3,16:19:45.14:540,45,0	1/1:0,27:27:78.24:936,78,0	0/0:11,0:11:33.11:0,33,459	1/1:0,25:25:75.23:900,75,0	1/1:1,30:31:66.08:792,66,0	1/1:0,5:5:15.05:180,15,0
chr10	7097572	.	GCTGACATCACT	G	11844.34	PASS	AB=0.548;AC=17;AF=0.304;AN=56;BaseQRankSum=16.457;DP=746;FS=18.399;HRun=0;HaplotypeScore=233.7540;InbreedingCoeff=0.8886;MQ=56.40;MQ0=4;MQRankSum=-14.824;QD=64.72;ReadPosRankSum=5.295;VQSLOD=3.2278;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,138,6868	0/0:18,0:18:54.06:0,54,2659	0/0:21,0:10:6.12:0,6,1195	0/0:32,0:21:63.21:0,63,3067	0/0:12,0:12:33.03:0,33,1580	0/0:26,0:26:75.26:0,75,4159	0/0:42,0:42:99:0,114,6166	0/0:24,0:24:69.22:0,69,3303	0/0:26,0:26:78.24:0,78,4072	0/0:34,0:34:96.32:0,96,5358	0/0:15,0:15:42.14:0,42,2370	1/1:2,24:26:54.19:1824,54,0	1/1:1,21:22:45.15:1587,45,0	1/1:2,31:33:78.27:2718,78,0	0/0:25,0:25:75.26:0,75,4256	0/0:28,0:28:81.28:0,81,4258	0/0:35,0:35:99:0,105,5524	0/0:42,0:41:99:0,126,6817	0/0:25,0:24:60.16:0,60,3031	0/0:14,0:14:42.14:0,42,2066	0/0:70,0:70:99:0,202,10897	1/1:1,14:15:24.08:845,24,0	1/1:0,8:8:11.80:336,12,0	1/1:0,34:34:39.24:1312,39,0	0/0:25,0:25:75.23:0,75,3844	0/1:3,14:17:99:925,0,119	1/1:1,23:23:57.14:1874,57,0	1/1:0,4:4:12.04:423,12,0
chr10	7098713	.	AC	A	4067.64	PASS	AB=0.721;AC=20;AF=0.357;AN=56;BaseQRankSum=1.902;DP=494;FS=0.824;HRun=10;HaplotypeScore=61.0151;InbreedingCoeff=0.7783;MQ=81.46;MQ0=0;MQRankSum=-2.087;QD=17.84;ReadPosRankSum=4.989;VQSLOD=4.0515;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,26:36:76.75:656,77,0	0/0:1,0:5:8.69:0,9,61	0/0:15,0:15:1.66:0,2,183	0/0:17,0:17:30.35:0,30,248	0/0:8,0:9:8.58:0,9,64	0/0:17,1:18:7.04:0,7,306	0/1:22,4:27:38.15:38,0,504	0/0:7,0:17:23.12:0,23,132	0/0:13,0:13:33.09:0,33,365	0/0:9,0:11:11.86:0,12,108	0/0:8,0:17:23.39:0,23,184	1/1:2,14:16:41.99:365,42,0	1/1:2,14:17:41.02:344,41,0	1/1:2,18:20:47.99:416,48,0	0/0:2,0:13:19.89:0,20,99	0/0:21,0:21:50.85:0,51,527	0/0:22,1:23:30.98:0,31,535	0/0:6,0:19:32.18:0,32,187	0/0:16,0:16:24.06:0,24,266	0/0:18,1:19:14.88:0,15,347	0/0:9,0:22:17.04:0,17,93	1/1:3,18:21:53.97:465,54,0	1/1:2,15:17:35.51:303,36,0	1/1:5,24:29:68.91:590,69,0	0/0:11,0:11:18.05:0,18,199	1/1:3,10:13:26.98:234,27,0	1/1:2,22:24:59.98:521,60,0	0/1:2,6:8:12.19:135,0,12
chr10	7098919	.	TA	T	2713.11	PASS	AB=0.685;AC=46;AF=0.821;AN=56;BaseQRankSum=0.236;DP=553;FS=2.615;HRun=16;HaplotypeScore=72.7147;InbreedingCoeff=0.3564;MQ=75.55;MQ0=1;MQRankSum=-0.371;QD=5.72;ReadPosRankSum=6.153;VQSLOD=2.7106;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:38:73.12:0,73,416	1/1:3,4:7:8.75:54,9,0	0/0:21,0:11:2.13:0,2,86	0/0:16,0:15:11.67:0,12,70	1/1:13,9:23:9.06:156,9,0	1/1:4,17:22:18.05:214,18,0	0/1:7,8:18:38.92:93,0,39	1/1:18,18:38:25.80:233,26,0	0/1:11,5:17:6.18:61,0,6	1/1:13,15:28:23.87:250,24,0	1/1:7,8:15:1.17:115,1,0	1/1:8,0:15:10.73:38,11,0	1/1:2,0:7:6.09:17,6,0	1/1:10,0:17:18.67:60,19,0	0/1:6,10:16:44.31:81,0,44	1/1:7,12:21:25.42:149,25,0	1/1:13,11:25:47.08:265,47,0	1/1:8,9:19:8.68:140,9,0	0/1:16,5:23:6.16:135,0,6	1/1:18,12:32:8.56:253,9,0	1/1:3,6:11:15.79:84,16,0	1/1:7,1:18:14.04:41,14,0	1/1:7,0:18:20.05:58,20,0	1/1:2,0:14:16.28:47,16,0	1/1:9,9:19:14.94:147,15,0	1/1:7,1:21:26.50:85,27,0	1/1:5,0:20:24.65:73,25,0	1/1:3,0:9:6.06:18,6,0
chr10	7100997	.	GCTCTCTCTCTCTCTCTCT	G	5930.45	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=8.008;DP=514;FS=15.247;HRun=0;HaplotypeScore=231.4973;InbreedingCoeff=0.8725;MQ=59.71;MQ0=9;MQRankSum=-5.775;QD=33.89;ReadPosRankSum=1.055;VQSLOD=2.7422;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:37:24.08:0,24,1691	0/0:4,0:4:9.03:0,9,678	0/0:14,0:9:2.99:0,3,24	0/1:26,0:11:0:0,0,0	0/0:14,0:14:21.07:0,21,995	0/0:12,0:20:27.09:0,27,1157	0/0:15,0:18:9.01:0,9,276	0/0:23,0:23:7.57:0,8,113	0/0:12,0:22:30.10:0,30,1417	0/0:17,0:17:27.09:0,27,1802	0/0:15,0:15:18.95:0,19,1196	1/1:2,5:7:15.05:730,15,0	1/1:6,1:9:12.04:420,12,0	1/1:11,5:17:27.05:910,27,0	0/0:22,0:22:36.12:0,36,2417	0/0:15,0:17:24.08:0,24,860	0/0:13,0:20:21.07:0,21,829	0/0:12,0:12:27.07:0,27,1666	0/0:11,0:11:17.27:0,17,515	0/0:19,0:26:26.99:0,27,781	0/0:34,0:34:36.55:0,37,2257	1/1:12,2:14:11.99:338,12,0	1/1:8,6:14:9.03:383,9,0	1/1:22,13:34:26.22:1054,26,0	0/0:8,0:12:9.02:0,9,273	1/1:6,8:14:18.02:631,18,0	1/1:13,12:26:24.08:1148,24,0	1/1:11,2:11:9.02:318,9,0
chr10	7102626	.	GTCCATCCATCCATCCA	G	7317.07	PASS	AB=0.737;AC=25;AF=0.446;AN=56;BaseQRankSum=10.933;DP=687;FS=0.455;HRun=0;HaplotypeScore=298.6334;InbreedingCoeff=0.5575;MQ=71.01;MQ0=4;MQRankSum=-11.132;QD=21.78;ReadPosRankSum=-0.719;VQSLOD=3.0929;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:37:44.36:0,44,2328	1/1:3,0:5:3.01:32,3,0	0/0:38,0:31:12.04:0,12,428	0/0:25,0:19:13.74:0,14,452	0/1:13,0:27:99:184,0,110	1/1:14,12:26:18.06:789,18,0	1/1:18,11:29:12.04:526,12,0	0/0:21,0:21:18.04:0,18,248	1/1:13,13:26:30.10:1314,30,0	0/1:11,0:25:99:213,0,130	1/1:5,0:14:18.05:190,18,0	0/0:24,0:25:63.22:0,63,4430	0/0:32,0:32:69.24:0,69,4686	0/0:24,0:24:54.19:0,54,3816	0/1:10,0:30:99:417,0,144	1/1:19,12:31:24.08:1052,24,0	1/1:14,6:20:6.02:263,6,0	0/1:12,0:15:21.93:22,0,183	1/1:14,3:16:8.96:194,9,0	1/1:14,12:26:24.08:1051,24,0	0/1:20,0:21:20.24:20,0,79	0/0:27,0:27:48.16:0,48,3582	0/0:17,0:17:39.13:0,39,2862	0/0:27,0:27:66.23:0,66,4806	1/1:13,11:24:24.08:1052,24,0	0/0:11,0:19:4.64:0,5,1905	0/0:26,0:41:78.25:0,78,4216	0/0:8,0:17:42.14:0,42,2977
chr10	7102803	.	ACATATCTGACTT	A	2812.46	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=8.248;DP=661;FS=0.750;HRun=0;HaplotypeScore=228.0949;InbreedingCoeff=0.9919;MQ=83.21;MQ0=0;MQRankSum=-8.329;QD=76.01;ReadPosRankSum=-0.285;VQSLOD=2.9944;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,31:37:78.27:2907,78,0	0/0:6,0:6:18.06:0,18,1031	0/0:23,0:23:57.16:0,57,2827	0/0:19,0:19:44.70:0,45,2440	0/0:30,0:30:87.30:0,87,5101	0/0:23,0:23:69.24:0,69,3642	0/0:22,0:22:60.21:0,60,3179	0/0:47,0:47:99:0,129,7185	0/0:27,0:27:72.25:0,72,3822	0/0:25,0:25:75.25:0,75,4098	0/0:25,0:25:69.21:0,69,3716	0/0:13,0:13:39.13:0,39,2171	0/0:17,0:17:48.16:0,48,2816	0/0:22,0:22:63.19:0,63,3199	0/0:20,0:20:60.21:0,60,3420	0/0:26,0:26:75.26:0,75,4593	0/0:26,0:26:78.27:0,78,4301	0/0:18,0:18:51.18:0,51,3069	0/0:20,0:20:54.19:0,54,2879	0/0:28,0:28:78.27:0,78,4558	0/0:30,0:30:81.28:0,81,4773	0/0:28,0:28:81.27:0,81,4442	0/0:19,0:19:54.19:0,54,3059	0/0:15,0:15:39.13:0,39,2371	0/0:28,0:28:78.27:0,78,4621	0/0:19,0:19:57.20:0,57,3472	0/0:32,0:32:93.31:0,93,5298	0/0:16,0:16:42.14:0,42,2535
chr10	7103553	.	A	AAAACAAAC	21211.93	PASS	AB=1.000;AC=35;AF=0.625;AN=56;BaseQRankSum=-14.235;DP=786;FS=11.122;HRun=0;HaplotypeScore=222.0530;InbreedingCoeff=0.9431;MQ=66.96;MQ0=2;MQRankSum=-10.813;QD=42.51;ReadPosRankSum=-6.956;VQSLOD=2.1712;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:53:37.37:0,37,664	1/1:5,3:10:18.06:631,18,0	0/1:40,0:33:0.37:0,0,70	0/0:22,0:20:8.40:0,8,179	1/1:19,16:38:57.19:1920,57,0	0/0:5,0:19:36.12:0,36,665	0/0:8,0:22:36.11:0,36,641	1/1:45,0:47:36.12:862,36,0	0/0:12,0:27:45.14:0,45,779	1/1:16,14:31:54.15:1751,54,0	1/1:15,11:27:37.01:1333,37,0	1/1:14,9:24:27.09:1050,27,0	1/1:13,8:22:36.12:1430,36,0	1/1:15,15:31:42.14:1681,42,0	1/1:14,11:28:45.14:1685,45,0	0/0:9,0:30:48.16:0,48,862	0/0:7,0:38:84.29:0,84,1557	1/1:21,5:31:27.09:1084,27,0	0/0:16,0:27:27.54:0,28,471	0/0:7,0:22:44.69:0,45,729	1/1:9,4:14:12.04:392,12,0	1/1:21,5:27:27.05:860,27,0	1/1:8,12:21:33.11:1299,33,0	1/1:26,11:40:34.83:1257,35,0	0/0:8,0:26:31.05:0,31,821	1/1:18,12:33:57.13:1958,57,0	1/1:9,11:23:39.13:1571,39,0	1/1:6,4:12:16.94:448,17,0
chr10	7105591	.	T	TGTCAGTCCTGAACGGGGG	26542.97	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=3.268;DP=340;FS=5.430;HRun=0;HaplotypeScore=200.0927;InbreedingCoeff=0.7907;MQ=91.57;MQ0=0;MQRankSum=-10.116;QD=89.37;ReadPosRankSum=-1.132;VQSLOD=4.1523;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:11:20.96:724,21,0	1/1:6,0:6:15.05:589,15,0	0/0:23,0:23:63.19:0,63,2369	0/0:20,0:20:57.18:0,57,2361	1/1:7,0:7:14.74:640,15,0	1/1:8,0:8:24.08:685,24,0	1/1:17,0:17:36.11:1246,36,0	1/1:13,0:13:26.92:1029,27,0	1/1:15,0:15:45.15:1274,45,0	1/1:6,0:6:18.06:488,18,0	1/1:3,0:3:6.02:167,6,0	1/1:19,1:20:54.13:2366,54,0	1/1:18,1:19:51.59:1973,52,0	1/1:28,1:29:81.28:2977,81,0	1/1:11,0:11:33.11:1211,33,0	1/1:14,0:14:39.13:1487,39,0	1/1:16,0:16:36.12:1637,36,0	1/1:6,0:6:15.05:603,15,0	1/1:5,0:5:15.05:615,15,0	1/1:6,0:6:12.03:356,12,0	1/1:8,0:8:8.72:255,9,0	1/1:10,0:10:12.45:379,12,0	1/1:8,0:8:17.98:427,18,0	1/1:22,1:24:38.68:2308,39,0	1/1:9,0:9:21.07:549,21,0	1/1:14,0:14:36.11:1339,36,0	1/1:11,0:11:30.10:1151,30,0	1/1:1,0:1:3.01:69,3,0
chr10	7105599	.	AC	A	1396.77	PASS	AB=1.000;AC=30;AF=0.536;AN=56;BaseQRankSum=-0.231;DP=239;FS=33.118;HRun=1;HaplotypeScore=48.8213;InbreedingCoeff=0.5094;MQ=112.09;MQ0=0;MQRankSum=-7.333;QD=10.27;ReadPosRankSum=-0.420;VQSLOD=-0.4792;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:21.01:0,21,246	0/0:1,0:1:2.90:0,3,16	0/0:27,0:27:81.05:0,81,1174	0/0:18,0:18:54.18:0,54,837	0/0:2,0:2:0.47:0,0,1	0/0:7,0:7:4.29:0,4,49	0/0:15,0:15:16.48:0,16,141	0/1:9,0:9:10.16:10,0,79	0/0:9,0:9:7.75:0,8,68	0/1:5,0:5:4.85:5,0,31	1/1:1,0:1:1.55:4,2,0	1/1:0,14:14:29.65:236,30,0	1/1:2,8:10:26.97:259,27,0	1/1:0,18:18:50.80:495,51,0	1/1:8,0:8:2.37:8,2,0	0/0:5,0:5:8.70:0,9,47	0/1:7,0:7:0.95:1,0,11	0/0:4,0:4:8.87:0,9,60	0/0:5,0:5:8.13:0,8,47	1/1:8,0:8:3.11:8,3,0	1/1:4,0:4:2.80:7,3,0	1/1:0,11:11:15.33:120,15,0	1/1:0,4:4:11.84:88,12,0	1/1:0,17:17:16.66:182,17,0	0/1:7,0:7:5.91:6,0,17	1/1:5,1:6:0.03:52,0,0	1/1:0,6:6:5.95:54,6,0	1/1:0,1:1:3.01:38,3,0
chr10	7105771	.	CGTCCTCCAACATTTTTATGTACGTCTTTGT	C	6611.26	PASS	AC=46;AF=0.885;AN=52;BaseQRankSum=0.777;DP=444;FS=1.426;HRun=0;HaplotypeScore=286.7987;InbreedingCoeff=0.4855;MQ=77.40;MQ0=0;MQRankSum=-4.383;QD=17.82;ReadPosRankSum=4.495;VQSLOD=3.3056;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:13,21:34:12.04:807,12,0	1/1:2,5:7:3.01:229,3,0	0/0:19,0:19:5.91:0,6,151	0/0:17,0:16:18.06:0,18,954	1/1:2,11:13:14.88:294,15,0	1/1:11,0:11:2.97:20,3,0	1/1:19,0:19:8.89:63,9,0	1/1:26,0:26:12.01:191,12,0	1/1:9,0:9:8.95:95,9,0	1/1:12,0:11:9:132,9,0	1/1:7,7:14:8.94:192,9,0	1/1:10,2:12:6.02:418,6,0	1/1:5,7:12:3.01:229,3,0	./.	1/1:17,0:17:20.76:247,21,0	1/1:12,0:12:14.95:170,15,0	1/1:22,0:22:32.82:293,33,0	1/1:11,0:11:11.32:74,11,0	1/1:16,0:16:14.92:202,15,0	1/1:17,8:24:3.01:139,3,0	1/1:17,0:17:14.93:246,15,0	1/1:10,4:14:9.03:326,9,0	1/1:22,5:27:24.07:1154,24,0	0/0:6,13:19:1.25:0,1,3	1/1:4,10:14:9.03:648,9,0	1/1:9,6:15:14.47:397,14,0	1/1:12,0:12:3.01:44,3,0	./.
chr10	7105979	.	CAT	C	1969.34	PASS	AB=1.000;AC=35;AF=0.625;AN=56;BaseQRankSum=7.659;DP=662;FS=3.603;HRun=0;HaplotypeScore=256.8265;InbreedingCoeff=-0.1759;MQ=40.33;MQ0=15;MQRankSum=-5.276;QD=3.23;ReadPosRankSum=7.714;VQSLOD=1.6160;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:34,0:34:54.95:64,0,55	0/0:6,0:6:7.54:0,8,59	0/1:31,0:19:19.05:19,0,312	0/0:36,0:17:6.38:0,6,285	1/1:19,0:15:19.57:97,20,0	0/1:19,0:19:74.19:74,0,105	0/1:34,0:34:79.47:110,0,79	0/1:42,0:36:99:120,0,266	1/1:16,0:16:20.23:124,20,0	0/1:28,0:27:99:110,0,183	0/1:13,0:11:5.90:6,0,41	1/1:30,1:31:8.53:86,9,0	1/1:23,0:23:20.28:127,20,0	1/1:20,2:21:11.27:89,11,0	0/1:24,0:24:38.26:100,0,38	0/1:30,0:30:70.77:71,0,129	0/1:23,0:20:17.18:17,0,135	0/1:19,0:16:26.14:60,0,26	0/1:16,0:13:40.58:41,0,62	0/1:19,0:17:45.67:52,0,46	0/1:47,0:44:27.71:73,0,28	1/1:22,3:16:8.92:65,9,0	1/1:12,0:7:6.51:50,7,0	1/1:31,0:31:6.20:40,6,0	0/0:9,0:8:2.74:0,3,12	1/1:28,2:27:53.47:365,53,0	1/1:19,0:19:27.67:174,28,0	0/1:3,0:3:0.24:0,0,0
chr10	7105981	.	TATACAC	T	2858.36	PASS	AB=0.993;AC=19;AF=0.339;AN=56;BaseQRankSum=2.328;DP=645;FS=17.895;HRun=0;HaplotypeScore=272.9270;InbreedingCoeff=0.6870;MQ=38.96;MQ0=15;MQRankSum=-4.364;QD=10.71;ReadPosRankSum=1.573;VQSLOD=1.0837;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:2.77:0,3,235	0/0:5,0:5:11.82:0,12,99	0/1:30,0:18:9.22:9,0,410	0/0:35,0:15:19.60:0,20,424	0/0:19,0:15:20.62:0,21,154	0/0:19,0:19:44.83:0,45,437	0/0:33,0:33:55.18:0,55,528	0/0:43,0:37:67.98:0,68,744	0/0:16,0:16:30.56:0,31,227	0/0:27,0:26:62.30:0,62,587	0/0:13,0:11:11.82:0,12,122	1/1:24,6:30:17.48:328,17,0	1/1:17,4:21:37.53:396,38,0	1/1:17,5:21:35.84:371,36,0	0/0:22,0:22:41.71:0,42,393	0/0:28,0:28:49.50:0,49,468	0/0:23,0:20:38.61:0,39,412	0/0:19,0:16:32.44:0,32,329	0/0:16,0:13:26.41:0,26,307	0/0:19,0:17:26.83:0,27,237	0/1:46,0:44:52.47:52,0,256	1/1:18,5:14:18.04:209,18,0	1/1:10,2:7:12.01:121,12,0	1/1:29,2:31:5.77:106,6,0	0/0:9,0:8:2.94:0,3,18	1/1:22,7:26:55.10:826,55,0	1/1:12,7:19:35.22:609,35,0	0/1:3,0:3:13.14:32,0,13
chr10	7105983	.	TAC	T	4055.12	PASS	AB=0.938;AC=34;AF=0.607;AN=56;BaseQRankSum=-4.125;DP=632;FS=1.197;HRun=0;HaplotypeScore=240.6876;InbreedingCoeff=0.4761;MQ=38.03;MQ0=16;MQRankSum=-0.594;QD=8.57;ReadPosRankSum=-0.183;VQSLOD=3.1652;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:25,6:31:19.49:211,19,0	0/0:5,0:5:2.37:0,2,8	0/0:28,0:17:20.95:0,21,254	0/0:35,0:15:16.97:0,17,198	1/1:10,8:14:21.06:232,21,0	1/1:11,7:18:23.88:282,24,0	1/1:25,8:33:21.30:403,21,0	1/1:31,13:37:5.71:470,6,0	1/1:9,7:16:10.23:324,10,0	1/1:20,7:26:41.98:466,42,0	1/1:10,3:11:0.94:45,1,0	0/0:29,0:29:22.85:0,23,118	0/1:19,0:19:1.15:1,0,83	0/0:23,0:22:20.38:0,20,123	1/1:13,9:22:33.07:358,33,0	1/1:17,10:27:30.70:296,31,0	0/1:18,5:20:14.76:124,0,15	1/1:13,6:16:9.05:226,9,0	0/1:13,4:13:19.99:166,0,20	1/1:10,6:14:18.01:187,18,0	1/1:39,7:43:9.64:220,10,0	0/0:23,0:14:8.27:0,8,47	0/0:12,0:7:5.80:0,6,32	0/1:30,0:30:6.86:7,0,22	1/1:6,0:5:2.22:7,2,0	0/1:30,0:27:27.90:28,0,41	0/1:18,0:18:0.70:1,0,59	0/0:3,0:3:5.87:0,6,35
chr10	7105997	.	C	CAG	2105.51	PASS	AB=0.991;AC=23;AF=0.411;AN=56;BaseQRankSum=-5.033;DP=643;FS=0.000;HRun=0;HaplotypeScore=257.5505;InbreedingCoeff=0.4344;MQ=29.20;MQ0=29;MQRankSum=2.101;QD=5.98;ReadPosRankSum=-1.202;VQSLOD=2.7289;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:33,0:33:6.78:74,7,0	0/0:2,0:2:1.55:0,2,4	0/0:36,0:10:29.82:0,30,307	0/0:45,0:10:27.76:0,28,301	1/1:18,0:13:20.14:118,20,0	0/1:16,0:16:8.28:142,0,8	1/1:27,1:27:27.62:228,28,0	0/1:43,0:34:3.95:287,0,4	0/1:21,0:20:0.12:199,0,0	1/1:19,1:18:22.94:296,23,0	1/1:11,1:10:0.81:28,1,0	0/0:34,0:33:27.12:0,27,203	0/0:19,0:18:32.03:0,32,210	0/0:27,0:25:31.42:0,31,182	1/1:23,0:21:31.46:190,31,0	1/1:18,0:18:16.11:171,16,0	0/1:22,1:20:34.59:69,0,35	0/1:19,0:17:2.51:138,0,3	0/1:16,0:13:18.61:158,0,19	1/1:14,0:13:17.40:98,17,0	0/1:47,1:43:49.19:94,0,49	0/0:24,0:13:11.60:0,12,64	0/0:18,0:12:5.85:0,6,34	0/0:28,0:28:1.83:0,2,19	0/0:6,0:5:2.68:0,3,11	0/0:28,0:22:37.59:0,38,267	0/0:20,0:20:44.12:0,44,320	0/0:4,0:4:8.87:0,9,58
chr10	7106007	.	CACACACACACAG	C	1599.89	PASS	AB=0.995;AC=28;AF=0.538;AN=52;BaseQRankSum=-1.836;DP=653;FS=4.593;HRun=0;HaplotypeScore=289.7577;InbreedingCoeff=-0.0895;MQ=29.23;MQ0=40;MQRankSum=-1.123;QD=3.16;ReadPosRankSum=-3.394;VQSLOD=1.3426;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:29:7.81:31,0,8	1/1:3,0:3:3.01:36,3,0	0/1:52,0:7:4.99:5,0,48	0/0:65,0:7:0.63:0,1,4	1/1:18,0:13:2.88:15,3,0	0/1:15,0:15:5.20:5,0,64	0/0:25,0:26:8.88:0,9,92	0/1:40,0:29:59.58:60,0,138	0/1:15,0:14:32.24:54,0,32	0/1:18,0:17:39.51:40,0,98	0/1:9,0:7:0:0,0,0	1/1:33,1:33:7.48:81,7,0	0/1:22,1:22:14.35:237,0,14	1/1:25,2:25:15.25:106,15,0	0/1:20,0:18:0:0,0,0	0/1:14,0:15:4.81:5,0,12	0/0:18,0:16:9.97:0,10,85	0/1:17,0:15:20.64:21,0,54	0/1:16,0:13:27.47:66,0,27	./.	0/1:45,0:42:57.67:80,0,58	1/1:23,1:12:1.35:4,1,0	0/0:16,1:11:2.64:0,3,18	0/1:27,1:28:3.59:53,0,4	./.	1/1:28,2:24:2.89:427,3,0	1/1:20,2:22:28.98:417,29,0	0/0:3,0:3:5.27:0,5,114
chr10	7106010	.	A	ACT	44.60	PASS	AB=0.960;AC=5;AF=0.089;AN=56;BaseQRankSum=1.758;DP=662;FS=0.894;HRun=0;HaplotypeScore=258.2603;InbreedingCoeff=0.1089;MQ=28.67;MQ0=41;MQRankSum=-0.941;QD=0.61;ReadPosRankSum=4.598;VQSLOD=2.3704;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:21.71:0,22,134	1/1:3,0:3:2.74:12,3,0	0/0:59,0:7:0.09:0,0,79	0/0:65,0:7:12.46:0,12,105	0/0:19,0:13:20.52:0,21,129	0/0:16,0:16:17.78:0,18,127	0/0:25,0:24:5.92:0,6,113	0/1:37,0:27:8.37:8,0,217	0/0:15,0:14:24.35:0,24,142	0/0:18,0:15:19.38:0,19,167	0/0:11,0:8:2.95:0,3,19	0/0:35,0:34:24.23:0,24,185	0/0:24,0:23:28.84:0,29,222	0/0:29,0:27:31.63:0,32,198	0/0:20,0:18:23.65:0,24,159	0/0:14,0:14:21.29:0,21,137	0/0:20,0:17:4.19:0,4,115	0/0:17,0:15:29.11:0,29,183	0/0:17,0:13:19.53:0,20,135	0/0:10,0:9:9.75:0,10,59	0/0:48,0:42:10.83:0,11,137	0/0:23,0:11:11.72:0,12,69	0/0:18,0:12:8.86:0,9,68	0/1:25,4:29:11.36:112,0,11	0/0:5,0:4:2.97:0,3,20	0/0:28,0:22:22.05:0,22,255	0/0:22,0:22:34.16:0,34,253	0/1:3,0:3:13.03:13,0,56
chr10	7106019	.	GACAC	G	772.90	PASS	AB=0.948;AC=26;AF=0.520;AN=50;BaseQRankSum=-0.821;DP=654;FS=2.801;HRun=0;HaplotypeScore=246.7517;InbreedingCoeff=-0.2322;MQ=33.74;MQ0=44;MQRankSum=-0.625;QD=1.56;ReadPosRankSum=-1.351;VQSLOD=2.5469;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:21,4:25:2.90:37,3,0	1/1:3,0:3:2.04:6,2,0	0/0:74,0:7:11.17:0,11,133	0/1:80,0:7:6.05:6,0,13	0/1:15,2:10:0.01:0,0,0	1/1:14,4:18:2:60,2,0	0/1:22,3:24:0.11:0,0,0	0/1:33,0:23:29.42:107,0,29	0/1:14,3:16:31.39:66,0,31	0/1:17,1:12:1.69:111,0,2	1/1:11,1:9:1.25:3,1,0	0/0:32,0:30:9.77:0,10,38	0/1:22,0:21:8:8,0,82	1/1:28,0:26:0.23:1,0,0	./.	0/1:16,0:16:13.02:13,0,14	0/1:14,4:15:75.66:184,0,76	0/1:14,2:14:42.32:125,0,42	0/1:14,1:12:53.47:70,0,53	./.	0/1:40,3:37:50.21:51,0,50	0/1:20,0:9:0.01:0,0,0	0/0:17,0:13:2.93:0,3,40	0/1:31,0:31:9.45:17,0,9	./.	0/1:24,0:19:24.09:24,0,81	0/1:15,0:15:9.20:9,0,76	0/0:3,0:3:6.02:0,6,90
chr10	7106029	.	C	CAG	70.86	PASS	AB=1.000;AC=8;AF=0.154;AN=52;BaseQRankSum=2.810;DP=719;FS=12.330;HRun=0;HaplotypeScore=259.1114;InbreedingCoeff=-0.0250;MQ=33.43;MQ0=43;MQRankSum=-0.712;QD=0.41;ReadPosRankSum=-0.747;VQSLOD=0.5768;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:14.81:0,15,79	0/0:4,0:4:2.26:0,2,17	0/0:102,0:9:26.43:0,26,222	0/0:99,0:11:10.33:0,10,101	0/0:14,0:9:2.99:0,3,24	0/0:18,0:18:12.66:0,13,82	0/0:23,0:22:4.25:0,4,29	0/0:27,0:20:13.45:0,13,186	0/0:21,0:19:11.95:0,12,129	0/1:17,0:11:3.83:4,0,83	0/0:13,0:10:1.24:0,1,3	0/1:33,0:31:16:16,0,26	0/1:22,0:21:20.35:20,0,103	0/1:28,0:26:5.77:6,0,30	0/0:19,0:17:2.99:0,3,24	0/0:18,0:18:3.64:0,4,22	0/0:20,0:17:20.92:0,21,162	0/0:18,0:16:26.59:0,27,175	0/0:14,0:11:16.02:0,16,115	./.	0/0:50,0:45:28.09:0,28,188	0/0:21,0:12:0:0,0,0	./.	1/1:29,4:33:0.23:102,0,0	0/0:9,0:8:2.90:0,3,25	0/1:21,0:17:14.37:14,0,57	0/1:17,0:17:21.85:22,0,67	0/0:3,0:3:5.93:0,6,57
chr10	7106048	.	GAC	G	3483.14	PASS	AB=0.822;AC=33;AF=0.611;AN=54;BaseQRankSum=-4.928;DP=704;FS=1.019;HRun=0;HaplotypeScore=236.3365;InbreedingCoeff=0.6933;MQ=36.67;MQ0=30;MQRankSum=1.821;QD=9.49;ReadPosRankSum=-1.361;VQSLOD=3.1359;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:14,12:26:10.67:160,11,0	1/1:2,3:5:5.97:45,6,0	0/0:97,0:9:11.97:0,12,177	0/0:88,1:11:13.70:0,14,135	1/1:7,6:9:8.99:94,9,0	1/1:15,10:25:50.84:459,51,0	1/1:9,12:20:17.61:142,18,0	0/1:14,11:20:42.07:313,0,42	1/1:10,14:22:20.44:367,20,0	1/1:8,6:10:2.95:155,3,0	1/1:1,11:11:11.92:87,12,0	0/0:29,0:28:46.56:0,47,512	0/0:21,0:20:53.88:0,54,649	0/0:25,0:23:31.39:0,31,321	1/1:9,8:18:32.81:303,33,0	1/1:6,10:16:32.80:265,33,0	1/1:14,8:20:1.89:242,2,0	1/1:9,6:13:16.77:181,17,0	1/1:9,4:10:1.20:94,1,0	1/1:6,6:10:17.67:148,18,0	0/1:38,16:48:3.15:210,0,3	0/0:18,0:10:12.04:0,12,158	0/0:21,0:20:28.91:0,29,285	0/1:35,0:35:0.20:0,0,93	1/1:4,10:13:23.93:219,24,0	0/0:20,0:16:26.17:0,26,264	0/0:15,0:15:25.89:0,26,319	./.
chr10	7106063	.	ACT	A	609.46	PASS	AB=0.972;AC=21;AF=0.389;AN=54;BaseQRankSum=2.467;DP=736;FS=14.991;HRun=0;HaplotypeScore=260.7080;InbreedingCoeff=-0.0840;MQ=43.07;MQ0=32;MQRankSum=-2.415;QD=1.39;ReadPosRankSum=4.682;VQSLOD=1.0272;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:27,1:27:13.21:44,0,13	1/1:4,0:4:3.78:10,4,0	0/0:70,0:10:16.74:0,17,204	0/1:86,2:17:7.98:8,0,139	1/1:12,0:9:3.73:24,4,0	1/1:22,0:22:8.20:78,8,0	0/0:28,0:27:1.56:0,2,131	0/1:27,1:23:63.66:124,0,64	0/1:28,1:27:54.79:69,0,55	0/1:24,0:18:43.46:43,0,125	1/1:12,0:11:4.26:10,4,0	0/0:35,0:34:13.90:0,14,520	0/0:23,0:22:60.53:0,61,763	0/0:33,0:31:21.38:0,21,308	0/1:24,1:24:40.25:118,0,40	0/1:17,0:17:20.49:31,0,20	0/1:30,0:28:25.99:26,0,73	0/1:15,0:13:6.93:68,0,7	0/1:14,1:12:25.57:26,0,102	0/1:10,2:10:3.82:22,0,4	0/1:61,0:54:32.72:33,0,107	0/0:17,0:10:15.83:0,16,207	0/0:21,0:19:32.86:0,33,413	0/0:32,2:34:0.76:0,1,110	0/1:17,0:16:4.52:34,0,5	0/0:18,1:14:33.77:0,34,400	0/0:16,0:16:27.90:0,28,414	./.
chr10	7106074	.	G	GAC	9906.75	PASS	AB=0.917;AC=43;AF=0.796;AN=54;BaseQRankSum=-4.738;DP=780;FS=0.716;HRun=0;HaplotypeScore=235.2629;InbreedingCoeff=0.1923;MQ=46.38;MQ0=29;MQRankSum=2.211;QD=15.48;ReadPosRankSum=3.315;VQSLOD=4.6285;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:23,2:31:5.51:176,6,0	1/1:0,4:4:6.02:71,6,0	0/0:60,0:8:7.52:0,8,106	0/0:78,0:14:19.85:0,20,205	1/1:13,3:13:9.03:149,9,0	1/1:17,9:26:54.17:774,54,0	1/1:19,11:29:44.73:657,45,0	0/1:24,7:25:11.08:353,0,11	1/1:15,16:29:65.79:985,66,0	1/1:15,13:22:48.14:722,48,0	1/1:10,6:15:16.54:235,17,0	1/1:36,0:35:37.96:281,38,0	1/1:23,0:21:27.23:210,27,0	0/1:33,0:31:4.98:63,0,5	1/1:20,9:27:63.21:970,63,0	1/1:10,12:22:39.12:525,39,0	1/1:18,14:30:55.71:758,56,0	1/1:10,7:15:27.50:474,27,0	1/1:11,8:16:30.08:466,30,0	1/1:9,5:13:26.10:322,26,0	1/1:47,19:58:63.02:916,63,0	0/1:18,0:12:10.02:29,0,10	0/1:24,0:23:54.86:55,0,55	1/1:34,0:34:20.05:132,20,0	0/1:8,10:17:1.95:403,0,2	0/1:22,0:17:9.95:117,0,10	0/1:18,0:18:37.30:64,0,37	./.
chr10	7106080	.	C	CACA	1241.72	PASS	AB=0.988;AC=24;AF=0.429;AN=56;BaseQRankSum=-3.298;DP=821;FS=5.965;HRun=0;HaplotypeScore=270.0182;InbreedingCoeff=-0.4985;MQ=48.18;MQ0=30;MQRankSum=6.285;QD=2.01;ReadPosRankSum=11.020;VQSLOD=0.5425;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:30,1:30:41.82:86,0,42	0/0:4,0:4:2.70:0,3,7	0/0:62,0:12:13.98:0,14,232	0/0:82,0:16:34.82:0,35,366	0/1:16,0:15:18.44:18,0,34	1/1:26,0:26:2.97:73,3,0	0/1:32,1:33:84.01:128,0,84	0/1:35,0:30:22.96:23,0,283	0/1:32,0:29:13.78:104,0,14	0/1:29,0:23:57.83:83,0,58	0/1:18,0:17:4.85:8,0,5	1/1:35,0:34:20.94:122,21,0	0/1:25,0:23:38.72:79,0,39	0/1:32,0:30:24.96:28,0,25	0/1:30,0:29:74.54:114,0,75	0/1:24,0:24:5.85:25,0,6	0/1:29,3:30:71.12:182,0,71	0/1:19,0:17:35.11:35,0,54	0/1:19,0:17:53.82:54,0,117	0/1:16,0:16:11.83:12,0,53	0/1:66,7:65:92.72:106,0,93	0/1:17,0:12:14.67:15,0,24	0/0:25,0:24:0.25:0,0,167	0/1:34,0:34:19.71:20,0,36	0/1:19,0:18:38.52:39,0,39	0/0:24,0:19:9.16:0,9,260	0/1:22,0:22:43.03:43,0,112	0/0:5,0:5:6.02:0,6,73
chr10	7106082	.	C	CACAG	5545.10	PASS	AB=1.000;AC=30;AF=0.536;AN=56;BaseQRankSum=-4.960;DP=831;FS=10.284;HRun=0;HaplotypeScore=263.7621;InbreedingCoeff=0.0992;MQ=50.32;MQ0=28;MQRankSum=5.041;QD=10.17;ReadPosRankSum=7.751;VQSLOD=2.4323;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:32:30.63:141,0,31	0/0:4,0:4:2.19:0,2,8	0/0:63,0:12:15.01:0,15,183	0/0:83,0:16:23.81:0,24,290	0/1:16,0:15:1.14:1,0,37	0/1:26,0:26:6.59:7,0,46	0/1:30,0:30:12.55:13,0,56	0/1:37,0:33:25.51:26,0,126	0/1:34,0:31:14.50:15,0,60	0/1:29,0:24:19.62:20,0,35	0/0:18,0:17:0.97:0,1,9	1/1:9,25:33:48.16:1202,48,0	1/1:5,20:24:45.14:1042,45,0	1/1:7,23:30:18.06:399,18,0	0/1:32,0:31:20.14:20,0,80	0/0:25,0:25:11.66:0,12,70	0/1:32,0:30:17.61:18,0,67	0/0:19,0:17:5.46:0,5,45	0/1:17,0:16:16.79:18,0,17	0/1:16,0:16:54.03:54,0,54	0/0:73,0:66:7.36:0,7,163	1/1:7,10:14:12.02:249,12,0	1/1:7,20:27:13.02:498,13,0	1/1:17,18:35:23.52:524,24,0	0/1:19,0:19:9.15:9,0,14	1/1:16,7:20:47.92:818,48,0	1/1:6,16:22:14.89:354,15,0	1/1:5,0:5:14.96:119,15,0
chr10	7106156	.	CACAG	C	13540.39	PASS	AB=0.600;AC=33;AF=0.589;AN=56;BaseQRankSum=2.372;DP=954;FS=45.185;HRun=0;HaplotypeScore=241.9170;InbreedingCoeff=0.9195;MQ=43.87;MQ0=44;MQRankSum=3.172;QD=26.65;ReadPosRankSum=0.732;VQSLOD=2.6531;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,29:36:75.97:1134,76,0	1/1:0,7:7:11.97:180,12,0	0/0:75,0:16:26.71:0,27,619	0/0:94,0:20:19.71:0,20,818	1/1:6,19:25:35.95:504,36,0	1/1:4,15:19:32.41:457,32,0	1/1:3,26:29:42.14:738,42,0	1/1:11,12:19:30.06:463,30,0	1/1:8,27:32:62.10:825,62,0	1/1:14,22:36:81.27:1388,81,0	1/1:4,8:12:17.63:173,18,0	0/0:39,0:38:77.29:0,77,1629	0/0:27,0:27:57.20:0,57,1391	0/0:48,0:45:83.74:0,84,1790	1/1:9,34:40:61.67:689,62,0	1/1:2,19:21:39.03:602,39,0	1/1:9,27:35:81.06:1304,81,0	0/1:8,16:22:29.91:691,0,30	1/1:8,15:16:30.10:512,30,0	1/1:4,22:25:47.37:616,47,0	1/1:24,63:82:99:2814,179,0	0/0:17,0:17:36.12:0,36,857	0/0:22,0:22:44.77:0,45,1075	0/0:42,0:42:61.83:0,62,1461	1/1:6,16:22:35.13:449,35,0	0/0:42,1:42:34.25:0,34,2392	0/0:23,0:23:48.03:0,48,1161	0/0:15,0:14:42.14:0,42,1086
chr10	7106223	.	GAC	G	10418.99	PASS	AC=34;AF=0.630;AN=54;BaseQRankSum=-11.225;DP=947;FS=3.115;HRun=0;HaplotypeScore=228.5403;InbreedingCoeff=0.8980;MQ=37.77;MQ0=137;MQRankSum=4.917;QD=17.16;ReadPosRankSum=2.791;VQSLOD=4.7908;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,30:36:53.25:773,53,0	1/1:2,12:13:32.95:375,33,0	./.	0/0:41,1:1:0:0,0,0	1/1:9,13:20:15.05:191,15,0	1/1:13,17:22:30.08:368,30,0	1/1:17,26:36:72.20:895,72,0	1/1:21,13:17:39:455,39,0	1/1:14,24:31:45.59:573,46,0	1/1:16,29:36:87.24:1085,87,0	1/1:11,13:18:39.10:469,39,0	0/0:35,1:32:60.17:0,60,927	0/0:26,1:24:62.89:0,63,998	0/0:37,2:38:21.68:0,22,792	1/1:12,25:30:18.45:229,18,0	1/1:9,29:32:48.15:610,48,0	1/1:16,21:32:24.43:748,24,0	1/1:9,24:25:31.01:566,31,0	1/1:9,10:12:27.09:342,27,0	1/1:13,19:25:44.34:557,44,0	1/1:38,57:82:99:1800,144,0	0/0:26,2:26:60.19:0,60,948	0/0:17,1:17:0.22:0,0,540	0/0:43,0:37:60.13:0,60,999	1/1:9,14:22:30.10:382,30,0	0/0:35,3:29:5.05:0,5,1061	0/0:24,0:23:48.16:0,48,780	0/0:3,0:3:9:0,9,121
chr10	7106235	.	CAG	C	4068.58	PASS	AB=0.986;AC=32;AF=0.615;AN=52;BaseQRankSum=2.931;DP=929;FS=1.139;HRun=0;HaplotypeScore=210.5680;InbreedingCoeff=0.7809;MQ=35.25;MQ0=182;MQRankSum=3.980;QD=7.03;ReadPosRankSum=4.529;VQSLOD=3.3804;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:39,1:32:39.66:302,40,0	1/1:12,0:12:25.48:130,25,0	./.	./.	1/1:23,0:19:14.22:76,14,0	1/1:24,0:16:26.07:155,26,0	1/1:42,0:29:66.59:385,67,0	0/1:34,1:22:76.79:98,0,77	1/1:33,0:25:43.40:256,43,0	1/1:46,1:34:1.61:392,2,0	1/1:26,0:17:33.25:156,33,0	0/0:31,0:27:61.34:0,61,1077	0/0:25,0:22:63.13:0,63,1121	0/0:33,0:31:44.73:0,45,935	0/1:33,0:26:18.54:85,0,19	1/1:36,0:29:46.70:290,47,0	1/1:30,2:26:46.70:336,47,0	1/1:30,1:23:48.78:277,49,0	1/1:21,0:11:11.56:98,12,0	1/1:34,0:23:42.53:226,43,0	1/1:85,4:76:99:665,117,0	0/0:29,0:26:57.18:0,57,1010	0/0:17,0:16:17.48:0,17,647	0/0:41,0:34:60.14:0,60,1151	1/1:20,0:17:10.23:141,10,0	0/0:36,0:26:37.80:0,38,1185	0/0:20,0:19:48.16:0,48,914	0/0:3,0:3:8.99:0,9,136
chr10	7106308	.	CACA	C	776.67	PASS	AB=0.906;AC=24;AF=0.545;AN=44;BaseQRankSum=-0.967;DP=392;FS=7.804;HRun=0;HaplotypeScore=45.8030;InbreedingCoeff=0.2012;MQ=23.70;MQ0=150;MQRankSum=3.947;QD=4.79;ReadPosRankSum=1.786;VQSLOD=0.2971;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:13,2:3:6.02:100,6,0	./.	0/0:69,0:6:15.05:0,15,284	0/0:88,0:5:5.64:0,6,136	./.	1/1:8,1:2:3.01:50,3,0	0/1:4,0:1:0:0,0,0	0/0:9,1:3:9.03:0,9,125	0/1:9,5:9:41.12:41,0,79	0/1:11,2:5:84.84:85,0,189	1/1:8,0:3:6.02:100,6,0	./.	0/0:3,0:1:0.47:0,0,1	./.	0/1:18,2:11:52.27:182,0,52	0/1:11,1:8:40.90:41,0,93	1/1:12,5:7:6.02:100,6,0	1/1:10,1:3:3.01:50,3,0	1/1:13,0:3:3.01:50,3,0	1/1:10,1:8:3.01:50,3,0	0/0:25,5:12:1.25:0,1,3	0/0:3,0:1:2.84:0,3,14	1/1:1,0:1:2.04:6,2,0	0/1:5,0:2:0:0,0,0	1/1:8,1:7:3.48:51,3,0	0/0:4,0:3:8.76:0,9,120	./.	./.
chr10	7106390	.	A	AG	2862.53	PASS	AB=0.833;AC=20;AF=0.385;AN=52;BaseQRankSum=12.469;DP=1060;FS=22.901;HRun=0;HaplotypeScore=198.1226;InbreedingCoeff=-0.4874;MQ=26.40;MQ0=352;MQRankSum=-11.961;QD=3.65;ReadPosRankSum=-3.289;VQSLOD=1.5810;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:46,6:15:48.09:48,0,105	0/1:8,5:8:99:119,0,102	./.	./.	0/1:20,9:23:84.54:85,0,224	0/1:21,8:12:59.82:206,0,60	1/1:41,10:19:8.92:236,9,0	0/1:31,5:6:76.71:90,0,77	0/1:44,13:36:99:251,0,323	0/1:32,17:25:99:361,0,311	0/1:19,10:20:99:183,0,175	0/0:29,0:12:12.21:0,12,161	0/0:24,0:15:9.31:0,9,259	0/1:32,0:15:3.02:3,0,191	0/1:47,16:34:99:224,0,378	0/1:33,18:35:99:443,0,271	0/1:40,2:24:99:132,0,324	0/1:36,4:25:99:106,0,491	0/1:22,2:6:54.99:55,0,83	0/1:20,10:20:54.72:227,0,55	0/1:92,7:45:76.80:77,0,260	0/0:21,0:10:12.04:0,12,167	0/0:10,0:7:6.02:0,6,84	0/0:42,0:21:30.06:0,30,420	0/1:27,5:16:99:138,0,144	0/1:14,1:10:32.69:33,0,177	0/0:18,0:12:10.21:0,10,231	0/0:6,0:5:12.04:0,12,168
chr10	7106394	.	CAG	C	1030.21	PASS	AB=0.838;AC=20;AF=0.385;AN=52;BaseQRankSum=12.824;DP=1053;FS=31.079;HRun=0;HaplotypeScore=215.5255;InbreedingCoeff=-0.3146;MQ=26.83;MQ0=336;MQRankSum=-10.861;QD=1.41;ReadPosRankSum=-4.058;VQSLOD=0.7238;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:42,6:15:14.01:14,0,163	0/1:7,5:8:99:102,0,150	./.	./.	0/1:22,7:23:10.15:10,0,325	0/1:21,7:12:26.21:26,0,100	1/1:42,9:19:3.20:110,3,0	1/1:32,2:6:9.85:71,10,0	0/1:46,11:35:75.54:76,0,466	0/1:32,14:23:99:308,0,370	0/1:19,10:20:70.37:70,0,310	0/0:30,0:13:15.01:0,15,226	0/0:24,0:15:19.25:0,19,428	0/0:39,0:20:29.91:0,30,420	0/1:47,14:34:20.28:20,0,530	0/1:33,17:35:99:139,0,400	0/1:44,1:24:49.11:49,0,472	0/1:36,4:25:62.37:62,0,698	0/1:21,2:6:62.82:63,0,141	0/1:21,8:19:48.08:48,0,92	0/1:92,6:45:3.89:4,0,376	0/0:22,0:10:12.04:0,12,231	0/0:14,0:8:9.02:0,9,141	0/0:44,0:23:30.07:0,30,579	0/1:26,4:15:7.31:7,0,214	0/1:18,1:13:4.83:5,0,387	0/0:18,0:12:29.91:0,30,419	0/0:6,0:5:12.04:0,12,232
chr10	7106398	.	CAG	C	998.88	PASS	AB=0.839;AC=20;AF=0.385;AN=52;BaseQRankSum=12.437;DP=1031;FS=33.040;HRun=0;HaplotypeScore=221.3782;InbreedingCoeff=-0.2799;MQ=27.18;MQ0=318;MQRankSum=-10.654;QD=1.41;ReadPosRankSum=-4.866;VQSLOD=0.3106;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:43,6:17:11.75:12,0,163	0/1:7,5:8:99:99,0,150	./.	./.	0/1:17,7:19:9.20:9,0,324	0/1:22,7:12:24.74:25,0,100	1/1:43,9:21:17.04:127,17,0	1/1:26,2:5:7.50:55,7,0	0/1:44,11:33:72.76:73,0,476	0/1:31,14:23:99:325,0,351	0/1:17,10:20:60.64:61,0,318	0/0:29,0:14:19.87:0,20,266	0/0:27,0:19:29.65:0,30,557	0/0:39,0:21:33.11:0,33,587	0/1:44,14:32:21.52:22,0,530	0/1:33,17:35:99:138,0,407	0/1:42,1:23:39.26:39,0,479	0/1:38,4:25:50.89:51,0,700	0/1:21,2:8:62.85:63,0,156	0/1:18,8:17:43.82:44,0,94	0/1:90,6:44:3.87:4,0,377	0/0:23,0:12:12.04:0,12,232	0/0:14,0:8:9.03:0,9,173	0/0:47,0:24:30.07:0,30,579	0/1:26,3:14:5.82:6,0,214	0/1:18,1:13:4.66:5,0,527	0/0:18,0:12:30.10:0,30,507	0/0:6,0:5:12.04:0,12,232
chr10	7106410	.	ACACT	A	1671.46	PASS	AB=0.920;AC=16;AF=0.308;AN=52;BaseQRankSum=8.399;DP=985;FS=0.000;HRun=0;HaplotypeScore=237.1625;InbreedingCoeff=-0.2983;MQ=27.98;MQ0=283;MQRankSum=-9.918;QD=3.20;ReadPosRankSum=-10.399;VQSLOD=-0.1407;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:45,0:17:27.28:27,0,230	0/1:11,0:8:19.58:20,0,240	./.	./.	0/1:25,0:19:0.97:1,0,448	0/0:27,0:11:5.47:0,5,157	1/1:45,0:19:9.30:54,9,0	0/0:20,0:3:5.84:0,6,41	0/0:52,0:30:34.65:0,35,636	0/0:37,0:20:0.33:0,0,500	0/1:26,0:18:39.53:40,0,422	0/1:27,8:23:99:283,0,341	0/1:21,10:22:99:434,0,480	0/1:28,13:24:99:373,0,649	0/0:53,0:30:22.95:0,23,786	0/1:43,0:30:52.62:53,0,547	0/1:40,0:22:2.04:2,0,656	0/0:39,0:26:52.84:0,53,1072	0/0:23,0:11:32.72:0,33,460	0/0:21,0:13:4.47:0,4,156	0/1:98,0:47:5.66:6,0,620	0/1:22,2:11:16.85:17,0,306	0/1:15,0:9:8.85:9,0,231	0/0:44,2:26:2.97:0,3,869	0/0:22,0:9:11.97:0,12,316	0/1:17,6:16:99:304,0,464	0/1:16,4:14:99:191,0,467	0/0:7,0:6:12.04:0,12,324
chr10	7106432	.	ACG	A	4553.08	PASS	AB=0.640;AC=25;AF=0.463;AN=54;BaseQRankSum=-4.736;DP=841;FS=4.046;HRun=0;HaplotypeScore=185.2312;InbreedingCoeff=0.3633;MQ=31.27;MQ0=153;MQRankSum=3.179;QD=10.69;ReadPosRankSum=-3.038;VQSLOD=4.2481;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,22:16:18.12:231,18,0	0/1:4,6:7:35.64:127,0,36	0/0:40,0:1:2.68:0,3,11	0/0:56,0:1:2.22:0,2,7	1/1:5,10:10:19.88:277,20,0	1/1:6,12:7:7.79:96,8,0	./.	0/1:6,3:4:50.39:50,0,74	0/1:10,27:21:26.05:337,0,26	0/1:13,8:13:99:196,0,202	1/1:7,9:12:20.90:281,21,0	0/0:39,0:27:53.11:0,53,899	0/0:37,0:29:68.50:0,69,1095	0/0:48,0:32:75.05:0,75,1221	1/1:8,29:21:31.82:462,32,0	1/1:8,15:18:29.20:387,29,0	0/1:10,26:22:43.53:477,0,44	0/1:11,23:22:93.95:536,0,94	0/1:8,12:14:74.61:397,0,75	1/1:7,8:9:7.79:93,8,0	1/1:33,51:43:35.38:442,35,0	0/0:29,0:16:17.99:0,18,296	0/0:20,0:12:0.05:0,0,123	0/0:48,0:29:39.68:0,40,671	1/1:6,11:7:12.03:162,12,0	0/0:39,1:32:92.36:0,92,1368	0/0:23,0:17:45.15:0,45,747	0/0:7,0:6:15.05:0,15,269
chr10	7106469	.	A	AAC	1787.27	PASS	AB=0.818;AC=25;AF=0.521;AN=48;BaseQRankSum=5.356;DP=568;FS=5.231;HRun=0;HaplotypeScore=171.5966;InbreedingCoeff=-0.1419;MQ=24.71;MQ0=182;MQRankSum=-4.513;QD=4.99;ReadPosRankSum=-0.103;VQSLOD=2.8561;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:9:3.48:36,3,0	0/1:3,0:3:19.80:20,0,35	./.	./.	0/1:6,0:6:0.09:0,0,0	./.	1/1:14,0:3:3.01:33,3,0	1/1:19,0:6:3.48:37,3,0	0/1:16,0:11:23:23,0,82	1/1:6,0:2:2.99:24,3,0	1/1:4,0:3:0.94:2,1,0	0/1:26,7:26:4.98:225,0,5	1/1:22,6:22:7.98:317,8,0	0/1:28,12:30:6.27:210,0,6	0/0:8,0:4:2.60:0,3,10	0/1:5,0:7:32.49:32,0,38	0/0:12,0:6:5.31:0,5,54	0/0:14,0:10:8.70:0,9,93	0/1:10,0:3:2.37:19,0,2	./.	0/0:38,1:14:5.80:0,6,82	0/1:16,4:15:0.96:128,0,1	0/1:11,4:11:10.22:106,0,10	0/1:32,4:22:10.70:11,0,29	0/1:4,0:5:10.90:62,0,11	0/1:29,3:28:15.95:421,0,16	0/1:16,3:17:26.84:214,0,27	0/0:3,0:3:5.36:0,5,22
chr10	7106473	.	CAGACAGACA	C	1841.99	PASS	AB=0.856;AC=25;AF=0.500;AN=50;BaseQRankSum=3.442;DP=549;FS=5.922;HRun=0;HaplotypeScore=187.5316;InbreedingCoeff=-0.4289;MQ=23.90;MQ0=187;MQRankSum=-4.710;QD=4.95;ReadPosRankSum=2.836;VQSLOD=1.5381;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:16,2:8:6.07:6,0,90	0/1:2,1:3:5.61:6,0,143	./.	./.	0/0:5,0:6:5.69:0,6,32	./.	1/1:16,0:2:2.84:14,3,0	1/1:25,0:5:8.94:94,9,0	0/1:11,2:9:27.39:27,0,285	0/1:7,1:4:68.20:68,0,213	1/1:4,1:3:2.62:16,3,0	0/1:30,3:26:99:220,0,231	0/1:26,0:21:99:323,0,169	0/1:36,2:28:99:171,0,309	0/1:7,1:4:7.65:15,0,8	0/1:6,0:7:65.76:66,0,136	0/1:10,1:5:10.74:11,0,82	0/0:9,0:5:8.06:0,8,303	1/1:11,0:4:9.44:106,9,0	0/0:5,0:3:5.84:0,6,109	0/0:35,0:11:9.50:0,10,287	0/1:20,1:16:55.33:55,0,179	0/1:11,3:10:63.22:63,0,119	0/1:33,3:22:34.18:34,0,102	0/1:3,0:5:17.50:18,0,101	0/1:28,1:25:99:480,0,347	0/1:18,2:17:99:179,0,234	0/1:3,0:3:15.74:16,0,187
chr10	7106475	.	G	GAC	2071.40	PASS	AB=0.972;AC=26;AF=0.520;AN=50;BaseQRankSum=6.792;DP=557;FS=4.193;HRun=0;HaplotypeScore=184.0269;InbreedingCoeff=-0.5025;MQ=24.00;MQ0=186;MQRankSum=-6.268;QD=5.30;ReadPosRankSum=0.339;VQSLOD=2.9752;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:12:29.05:29,0,29	0/1:4,0:3:23.08:23,0,37	./.	./.	0/1:10,1:9:0.09:0,0,0	./.	0/1:15,1:3:11.59:32,0,12	1/1:28,0:5:3.01:37,3,0	0/1:13,3:9:67.44:128,0,67	0/1:7,1:4:59.75:60,0,73	1/1:8,0:4:2.51:7,3,0	0/1:34,0:26:99:196,0,132	0/1:25,0:20:80.89:313,0,81	0/1:38,0:28:99:210,0,122	1/1:8,2:4:4.53:25,5,0	0/1:12,0:8:30.84:90,0,31	0/1:13,1:5:10.69:11,0,36	0/1:8,0:5:17.25:17,0,77	1/1:12,1:5:12.03:142,12,0	0/0:6,1:4:3.01:0,3,33	0/0:37,0:12:8.64:0,9,118	0/1:19,0:16:63.39:130,0,63	0/1:14,0:10:61.22:106,0,61	0/1:34,1:21:16.43:16,0,44	0/1:5,0:5:33.76:61,0,34	0/1:28,0:24:99:405,0,152	0/1:20,0:17:78.10:175,0,78	0/0:3,0:3:6.02:0,6,85
chr10	7106477	.	CAG	C	288.25	PASS	AB=0.888;AC=20;AF=0.400;AN=50;BaseQRankSum=5.397;DP=556;FS=0.735;HRun=0;HaplotypeScore=190.9990;InbreedingCoeff=-0.2558;MQ=23.42;MQ0=190;MQRankSum=-3.513;QD=1.13;ReadPosRankSum=5.751;VQSLOD=2.3735;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:24,2:12:5.48:5,0,57	0/1:3,1:3:7.78:8,0,52	./.	./.	1/1:8,3:9:1.35:4,1,0	./.	0/0:16,0:3:1.57:0,2,53	1/1:29,4:5:2.22:8,2,0	0/1:14,2:9:46.15:46,0,101	0/1:8,0:4:8.31:8,0,117	1/1:6,2:4:1.99:12,2,0	0/1:33,1:26:17.94:18,0,173	0/1:25,0:20:22.93:23,0,128	0/0:38,0:28:29.14:0,29,266	1/1:8,2:4:0.53:23,1,0	0/1:7,5:8:42.84:43,0,56	0/1:12,3:6:27.74:28,0,48	0/1:7,1:5:20.36:20,0,107	0/1:11,1:5:3.98:41,0,4	0/0:7,1:5:3.01:0,3,58	0/0:34,1:12:9.50:0,10,167	0/0:16,0:14:1.26:0,1,109	0/0:15,0:11:1.03:0,1,88	0/0:32,0:18:6.74:0,7,61	0/1:3,2:5:18.55:19,0,49	0/1:27,0:24:99:115,0,199	0/0:20,0:17:4.51:0,5,158	0/0:3,0:3:6.02:0,6,115
chr10	7106483	.	AC	A	770.95	PASS	AB=0.908;AC=15;AF=0.288;AN=52;BaseQRankSum=1.753;DP=555;FS=2.506;HRun=1;HaplotypeScore=197.8690;InbreedingCoeff=-0.1984;MQ=22.77;MQ0=195;MQRankSum=-3.057;QD=2.76;ReadPosRankSum=1.130;VQSLOD=-0.1497;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:13:5.48:5,0,73	0/0:6,0:5:2.31:0,2,116	./.	./.	0/0:14,0:11:3.96:0,4,32	0/0:9,0:4:8.86:0,9,65	0/1:17,0:3:8.54:9,0,42	1/1:34,3:3:2.22:7,2,0	0/0:16,0:9:1.96:0,2,198	0/0:10,0:6:6.82:0,7,157	0/0:9,0:6:1.82:0,2,5	0/1:26,4:22:70.71:71,0,79	0/1:12,8:17:3.49:241,0,3	0/1:30,4:24:26.05:26,0,104	0/0:13,0:5:8.72:0,9,55	0/0:12,0:8:3.31:0,3,89	0/0:18,0:8:9.02:0,9,111	0/0:9,0:6:14.96:0,15,180	0/0:10,0:4:11.93:0,12,129	0/0:9,0:7:11.84:0,12,129	0/0:37,0:14:6.35:0,6,97	0/1:14,2:16:51.02:76,0,51	0/1:15,0:13:31.09:50,0,31	1/1:29,1:17:1.77:4,2,0	0/1:5,0:5:26.72:27,0,69	0/1:15,7:19:99:308,0,145	0/1:19,4:19:67.37:67,0,84	0/1:3,0:3:14.22:14,0,64
chr10	7106489	.	ACACT	A	574.17	PASS	AB=0.963;AC=25;AF=0.481;AN=52;BaseQRankSum=-1.623;DP=520;FS=3.870;HRun=0;HaplotypeScore=189.0544;InbreedingCoeff=0.2023;MQ=21.87;MQ0=183;MQRankSum=0.131;QD=1.97;ReadPosRankSum=-4.845;VQSLOD=1.1863;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:25,2:13:15.69:16,0,82	0/0:6,0:5:6.29:0,6,128	./.	./.	1/1:14,0:11:6.73:41,7,0	0/0:14,0:5:8.99:0,9,74	0/1:18,0:4:1.98:2,0,56	0/0:34,0:2:2.04:0,2,6	0/0:17,0:10:5.55:0,6,223	0/1:10,0:6:20.56:21,0,199	1/1:9,0:6:4.72:17,5,0	1/1:22,3:18:11.01:135,11,0	1/1:14,1:13:15.13:104,15,0	1/1:29,1:20:8.20:58,8,0	0/1:14,0:5:18.23:18,0,37	0/1:11,0:8:40.60:41,0,65	0/0:17,0:8:5.93:0,6,45	0/0:7,0:5:14.92:0,15,206	0/0:9,0:4:10.61:0,11,62	0/0:9,0:7:4.15:0,4,145	0/1:33,1:12:19.30:19,0,133	1/1:16,0:15:6.35:23,6,0	1/1:15,0:13:9.09:62,9,0	0/1:20,5:13:0.34:0,0,0	0/1:5,0:5:2.76:3,0,99	0/1:19,0:15:11.52:167,0,12	0/0:17,0:13:9.08:0,9,184	1/1:1,0:1:2.37:8,2,0
chr10	7106502	.	G	GC	693.68	PASS	AB=0.873;AC=9;AF=0.167;AN=54;BaseQRankSum=1.476;DP=486;FS=4.735;HRun=0;HaplotypeScore=167.7513;InbreedingCoeff=0.1525;MQ=21.98;MQ0=138;MQRankSum=-0.675;QD=7.15;ReadPosRankSum=-1.598;VQSLOD=3.3273;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:13:8.60:0,9,112	0/0:7,0:6:16.29:0,16,202	0/0:44,0:1:3.01:0,3,35	0/0:46,0:2:6.02:0,6,81	0/0:15,0:13:6.90:0,7,86	0/0:13,0:5:15.05:0,15,209	0/0:20,0:6:7.86:0,8,110	0/0:26,0:3:9.03:0,9,112	0/0:20,0:12:24.54:0,25,303	0/1:12,0:8:10.67:11,0,239	0/0:10,0:7:1.25:0,1,5	1/1:11,3:11:8.10:112,8,0	0/1:3,2:9:9.27:68,0,9	0/0:6,8:14:2.68:0,3,11	0/0:17,0:8:7.09:0,7,90	0/0:10,0:8:4.17:0,4,66	0/0:17,0:9:11.06:0,11,83	0/0:6,0:5:15.04:0,15,186	0/0:6,0:4:10.58:0,11,127	0/0:11,0:9:15.52:0,16,197	0/0:27,0:11:8.10:0,8,67	1/1:6,5:14:1.35:36,1,0	0/0:8,3:11:3.52:0,4,21	./.	0/0:7,0:7:9.50:0,10,125	0/1:12,3:11:17.72:238,0,18	0/1:9,9:16:11.60:352,0,12	0/1:2,0:2:3.92:4,0,5
chr10	7106511	.	ACG	A	848.37	PASS	AB=0.826;AC=27;AF=0.500;AN=54;BaseQRankSum=-0.544;DP=526;FS=13.365;HRun=0;HaplotypeScore=167.2911;InbreedingCoeff=-0.1219;MQ=24.90;MQ0=123;MQRankSum=1.791;QD=2.63;ReadPosRankSum=-3.874;VQSLOD=0.8119;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:14,10:14:0.84:64,0,1	0/1:6,2:7:28.42:28,0,107	0/0:55,0:3:5.38:0,5,59	0/0:53,0:4:7.88:0,8,122	0/1:16,2:16:12.34:26,0,12	0/0:12,1:5:15.04:0,15,177	0/1:8,14:8:56.08:57,0,56	0/0:14,11:4:8.92:0,9,94	0/1:12,8:12:69.73:127,0,70	0/1:10,3:11:99:109,0,131	1/1:8,3:9:4.86:17,5,0	1/1:20,0:11:7.47:33,7,0	0/1:11,0:8:0:0,0,0	0/0:21,0:13:2.68:0,3,11	0/1:15,2:8:11.39:11,0,54	0/1:9,3:10:27.02:56,0,27	0/1:10,8:11:3.94:4,0,59	0/1:4,3:6:73.67:74,0,97	0/0:8,1:6:3.22:0,3,121	0/1:8,3:9:38.68:39,0,135	1/1:14,12:11:13.85:124,14,0	1/1:15,0:14:5.08:20,5,0	1/1:16,0:12:5.09:20,5,0	./.	0/1:9,0:9:1.53:2,0,75	0/1:16,0:11:6.25:79,0,6	0/1:21,0:17:27.79:76,0,28	1/1:5,0:2:5.59:35,6,0
chr10	7106516	.	GA	G	1893.48	PASS	AB=0.710;AC=24;AF=0.429;AN=56;BaseQRankSum=2.251;DP=531;FS=0.772;HRun=1;HaplotypeScore=156.8668;InbreedingCoeff=-0.2001;MQ=25.14;MQ0=111;MQRankSum=-0.350;QD=5.15;ReadPosRankSum=2.402;VQSLOD=0.5760;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:12,14:14:28.01:62,0,28	0/1:3,5:7:25.29:186,0,25	0/0:58,1:5:12.04:0,12,178	0/1:53,1:5:11.60:12,0,169	1/1:3,11:16:6.68:61,7,0	1/1:2,11:5:15.05:208,15,0	0/1:15,7:8:23.98:110,0,24	0/1:17,5:5:38.94:68,0,39	0/1:8,10:12:92.21:164,0,92	0/1:3,9:11:82.96:287,0,83	0/0:3,6:9:1.37:0,1,5	0/1:16,4:12:23.27:32,0,23	0/0:10,0:8:2.97:0,3,20	1/1:16,2:8:2.87:30,3,0	1/1:3,9:8:7.89:95,8,0	0/1:4,6:10:29.17:33,0,29	0/1:9,8:11:5.09:179,0,5	0/1:3,3:6:55.85:137,0,56	0/1:4,3:7:3.48:171,0,3	0/1:4,6:9:18.12:130,0,18	0/0:15,6:11:7.85:0,8,82	0/0:12,0:13:0.60:0,1,2	0/0:10,0:13:0.21:0,0,1	0/1:22,1:9:0:0,0,0	0/1:1,6:9:6.70:74,0,7	0/1:13,0:11:2.18:2,0,171	0/0:19,2:18:7.55:0,8,264	0/0:5,0:2:5.60:0,6,40
chr10	7106518	.	CAG	C	802.63	PASS	AB=0.939;AC=32;AF=0.571;AN=56;BaseQRankSum=5.981;DP=540;FS=0.884;HRun=0;HaplotypeScore=163.7162;InbreedingCoeff=-0.0007;MQ=25.21;MQ0=106;MQRankSum=-1.546;QD=2.17;ReadPosRankSum=3.102;VQSLOD=2.6552;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:14,11:14:23.41:36,0,23	0/1:8,1:7:33.70:65,0,34	0/0:59,1:6:10.85:0,11,179	0/0:56,0:7:14.35:0,14,184	1/1:18,0:16:6.87:32,7,0	1/1:15,0:6:14.27:73,14,0	0/1:22,1:8:12.89:38,0,13	0/1:27,0:5:14.39:25,0,14	0/1:18,2:12:67.59:68,0,99	0/1:10,1:11:83.67:106,0,84	0/1:10,1:9:0.03:0,0,0	1/1:22,0:13:3.19:14,3,0	0/0:11,0:8:0.47:0,0,1	0/0:18,0:8:0.47:0,0,1	1/1:17,0:9:6.10:40,6,0	0/1:13,0:11:6.28:6,0,27	1/1:17,1:11:14.53:86,15,0	0/1:7,0:6:40.68:41,0,54	1/1:10,0:7:0.37:58,0,0	0/1:10,0:9:17.89:30,0,18	0/0:23,1:11:5.68:0,6,80	0/1:16,0:13:0.16:0,0,0	0/1:16,0:13:0.08:0,0,0	0/1:26,0:9:0:0,0,0	1/1:9,0:9:7.44:33,7,0	1/1:15,0:11:25.49:109,25,0	0/1:22,0:19:32.83:57,0,33	1/1:5,0:2:5.36:32,5,0
chr10	7106522	.	CA	C	2712.08	PASS	AB=0.704;AC=32;AF=0.571;AN=56;BaseQRankSum=2.105;DP=582;FS=8.083;HRun=2;HaplotypeScore=166.4671;InbreedingCoeff=-0.0582;MQ=28.73;MQ0=100;MQRankSum=-0.864;QD=6.81;ReadPosRankSum=6.215;VQSLOD=0.5609;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:16,13:16:19.81:52,0,20	0/1:3,6:7:26.91:169,0,27	0/0:58,0:7:18.05:0,18,240	0/0:54,1:9:17.09:0,17,211	1/1:9,12:19:12.09:103,12,0	1/1:5,12:8:15.05:193,15,0	0/1:16,8:10:8.61:124,0,9	0/1:22,5:5:30.26:62,0,30	0/1:15,11:18:69.03:151,0,69	0/1:7,8:14:73.18:280,0,73	0/0:5,6:9:3.29:0,3,9	1/1:12,12:15:6.02:79,6,0	1/1:9,3:9:1.56:26,2,0	1/1:7,12:9:1.20:26,1,0	1/1:12,10:14:10.77:121,11,0	0/1:9,7:14:14.15:63,0,14	1/1:12,8:13:2.32:166,2,0	0/1:5,3:7:68.65:150,0,69	0/1:9,4:9:4.03:171,0,4	0/1:5,6:10:5.12:115,0,5	0/1:17,10:15:12.35:12,0,87	0/0:2,13:12:3.71:0,4,10	0/0:11,5:13:2.86:0,3,7	0/0:20,8:10:0.89:0,1,2	1/1:6,7:12:9.01:101,9,0	1/1:6,8:10:27.96:321,28,0	0/1:11,14:21:11.90:325,0,12	1/1:3,3:3:6.01:61,6,0
chr10	7106523	.	A	AC	2759.07	PASS	AB=0.974;AC=32;AF=0.571;AN=56;BaseQRankSum=2.198;DP=620;FS=5.124;HRun=1;HaplotypeScore=180.1773;InbreedingCoeff=-0.0607;MQ=29.36;MQ0=97;MQRankSum=-1.394;QD=6.39;ReadPosRankSum=5.656;VQSLOD=0.9440;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:31,0:18:15.82:59,0,16	0/1:9,0:7:23.93:129,0,24	0/0:59,0:8:18.05:0,18,227	0/0:56,0:9:17.08:0,17,198	1/1:23,0:21:9.87:110,10,0	1/1:17,0:8:15.01:138,15,0	0/1:24,0:11:15.08:88,0,15	0/1:25,0:5:31:63,0,31	0/1:28,0:20:63.02:131,0,63	0/1:20,0:19:75.20:312,0,75	0/0:11,0:9:3.05:0,3,8	1/1:18,11:20:6.01:67,6,0	1/1:4,7:8:1.57:45,2,0	1/1:12,7:9:1.31:44,1,0	1/1:24,0:15:5.56:89,6,0	0/1:16,0:14:10.11:57,0,10	1/1:24,0:17:2.65:242,3,0	0/1:8,0:7:62.76:135,0,63	0/1:14,0:10:4.22:182,0,4	0/1:11,1:11:4.98:102,0,5	0/1:32,0:20:12.44:12,0,80	0/0:14,2:13:4.21:0,4,10	0/0:7,9:13:2.90:0,3,7	0/0:22,7:11:0.86:0,1,2	1/1:15,0:13:13.27:117,13,0	1/1:14,2:11:27.96:360,28,0	0/1:18,8:21:8.91:360,0,9	1/1:4,5:6:6.01:74,6,0
chr10	7108318	.	C	CAGAGAG	139.89	PASS	AB=1.000;AC=12;AF=0.222;AN=54;BaseQRankSum=4.936;DP=492;FS=8.912;HRun=0;HaplotypeScore=118.5544;InbreedingCoeff=0.0013;MQ=43.79;MQ0=28;MQRankSum=-3.503;QD=0.85;ReadPosRankSum=-1.342;VQSLOD=1.7384;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:14,0:14:12.14:12,0,30	1/1:3,0:2:3.01:56,3,0	./.	0/0:1,0:1:3.01:0,3,43	1/1:7,6:14:0.47:1,0,0	0/0:17,0:17:15:0,15,199	0/1:24,0:23:8.03:8,0,63	0/0:24,0:9:23.80:0,24,266	0/1:23,0:23:14.75:15,0,140	0/1:16,0:12:95.83:96,0,252	0/0:14,0:10:5.76:0,6,44	0/0:21,0:21:42.13:0,42,879	0/0:13,0:13:32.60:0,33,575	0/0:15,0:14:33.11:0,33,761	0/0:28,0:27:17.93:0,18,232	0/1:20,0:20:37.34:37,0,301	0/0:18,0:18:2.22:0,2,8	0/1:5,0:5:10.98:11,0,196	0/1:20,0:17:31.05:31,0,504	0/0:20,0:17:15.03:0,15,245	0/0:16,0:14:0.47:0,0,1	0/0:30,0:30:45.15:0,45,904	0/0:16,0:16:21.07:0,21,421	0/0:27,0:27:30.06:0,30,520	0/1:25,0:22:0.26:0,0,363	0/0:27,0:25:1.35:0,1,1194	0/0:24,0:23:54.96:0,55,1231	0/0:13,0:12:33.11:0,33,769
chr10	7108320	.	C	CAGAGAGAG	656.93	PASS	AB=0.957;AC=15;AF=0.278;AN=54;BaseQRankSum=4.396;DP=488;FS=1.590;HRun=0;HaplotypeScore=125.9741;InbreedingCoeff=-0.0420;MQ=43.74;MQ0=28;MQRankSum=-2.402;QD=2.96;ReadPosRankSum=-3.645;VQSLOD=1.0631;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:13,0:13:30.96:31,0,41	1/1:3,0:2:3.01:74,3,0	./.	0/0:2,0:2:6.02:0,6,102	1/1:14,0:14:2.99:24,3,0	0/1:16,0:16:18.76:36,0,19	0/1:25,0:24:7.23:87,0,7	0/0:24,0:9:4.40:0,4,129	0/1:23,0:23:8.49:14,0,8	0/1:13,2:11:99:182,0,234	0/0:14,0:10:5.84:0,6,65	0/0:21,0:21:42.14:0,42,1093	0/0:15,0:14:35.99:0,36,775	0/0:15,0:14:33.11:0,33,891	0/0:12,7:26:9.03:0,9,187	0/1:11,8:20:55.51:56,0,158	0/0:16,0:16:0:0,0,0	0/1:5,0:5:21.13:21,0,211	0/1:20,1:18:99:177,0,171	0/0:8,8:16:5.70:0,6,34	0/1:15,0:13:0:0,0,0	0/0:30,0:30:45.15:0,45,1163	0/0:16,0:16:24.04:0,24,526	0/0:29,0:29:30.10:0,30,685	0/1:25,0:22:88.72:89,0,89	0/1:27,0:25:11.52:12,0,1391	0/0:23,0:22:54.14:0,54,1484	0/0:13,0:12:33.11:0,33,861
chr10	7108322	.	C	CAGAGAGAGAG	1793.49	PASS	AB=0.990;AC=22;AF=0.393;AN=56;BaseQRankSum=2.194;DP=492;FS=16.818;HRun=0;HaplotypeScore=128.8805;InbreedingCoeff=0.2075;MQ=43.97;MQ0=28;MQRankSum=-2.320;QD=6.90;ReadPosRankSum=-2.520;VQSLOD=0.7325;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:13,0:13:42.97:49,0,43	1/1:3,0:2:3.01:92,3,0	0/0:4,0:1:3.01:0,3,49	0/0:4,0:4:6.02:0,6,152	1/1:13,0:13:3.01:42,3,0	1/1:16,0:16:14.94:177,15,0	0/1:24,0:23:4.64:95,0,5	0/1:22,0:7:38.37:38,0,44	1/1:22,0:22:5.99:93,6,0	0/1:15,0:11:99:225,0,106	0/0:16,0:12:4.11:0,4,51	0/0:21,0:21:42.14:0,42,1201	0/0:15,0:14:36.10:0,36,913	0/0:16,0:15:33.10:0,33,947	0/0:26,0:25:9.02:0,9,123	0/1:19,0:20:43.30:174,0,43	0/0:0,13:18:0:0,0,0	0/1:5,0:5:28.71:29,0,191	0/1:21,0:18:10.71:458,0,11	1/1:18,0:15:11.97:115,12,0	1/1:15,0:13:0.35:0,0,0	0/0:30,0:30:45.15:0,45,1352	0/0:16,0:16:21.07:0,21,603	0/0:30,0:30:39.05:0,39,806	1/1:24,0:22:2.54:323,3,0	0/1:27,1:26:50.75:51,0,1359	0/0:23,0:22:53.85:0,54,1445	0/0:13,0:12:29.55:0,30,730
chr10	7108326	.	C	CAGAGAGAGAGAGAG	5066.62	PASS	AB=1.000;AC=39;AF=0.696;AN=56;BaseQRankSum=-3.057;DP=560;FS=76.180;HRun=0;HaplotypeScore=178.6614;InbreedingCoeff=0.3045;MQ=44.51;MQ0=28;MQRankSum=-3.517;QD=10.51;ReadPosRankSum=-3.589;VQSLOD=-0.0261;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:14,0:14:29.72:86,0,30	1/1:3,0:2:3.01:129,3,0	0/0:6,0:4:9:0,9,185	0/0:8,0:7:11.71:0,12,300	1/1:17,0:17:6.01:112,6,0	1/1:18,0:18:4.08:77,4,0	1/1:10,16:26:3.01:126,3,0	1/1:29,0:11:24.03:376,24,0	1/1:6,16:25:6.02:70,6,0	1/1:18,0:14:33.06:1014,33,0	1/1:17,0:13:12.02:153,12,0	0/1:21,0:21:34.27:34,0,817	0/1:16,0:15:19.73:20,0,839	0/0:15,0:14:6.10:0,6,794	1/1:34,0:32:9:99,9,0	1/1:26,0:26:30.04:474,30,0	1/1:17,0:17:6.02:204,6,0	1/1:7,0:7:8.39:147,8,0	1/1:29,0:26:67.82:1274,68,0	1/1:24,0:21:14.51:190,15,0	1/1:12,0:16:0.08:0,0,0	0/0:31,0:31:29.28:0,29,1287	0/0:18,0:18:8.50:0,8,629	0/1:30,0:30:3.29:3,0,811	1/1:24,0:21:9.97:215,10,0	0/1:29,0:27:99:237,0,1155	0/1:25,0:24:0.40:0,0,1084	0/1:14,0:13:25.96:26,0,441
chr10	7108334	.	G	GAGAGAGAC	2377.31	PASS	AB=1.000;AC=27;AF=0.482;AN=56;BaseQRankSum=6.465;DP=564;FS=59.038;HRun=0;HaplotypeScore=157.2045;InbreedingCoeff=-0.3315;MQ=45.55;MQ0=25;MQRankSum=-4.685;QD=5.15;ReadPosRankSum=-0.589;VQSLOD=0.5489;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,6:18:3.01:92,3,0	1/1:3,0:2:3.01:56,3,0	0/0:11,0:7:21.02:0,21,311	0/0:13,0:11:23.79:0,24,388	0/1:18,0:18:18.88:61,0,19	0/1:18,0:18:13.26:50,0,13	0/1:20,0:19:18.92:48,0,19	0/1:33,0:16:99:116,0,149	0/1:24,0:24:33.91:34,0,78	1/1:16,0:12:4.27:438,4,0	0/1:19,0:15:12.43:62,0,12	0/1:22,0:22:77.72:78,0,437	0/1:16,0:16:33.11:33,0,475	0/0:14,0:13:6.09:0,6,411	0/1:31,0:29:9.30:9,0,78	1/1:26,0:26:4.52:258,5,0	0/1:13,0:13:34.87:101,0,35	0/1:5,0:5:8.98:76,0,9	1/1:35,0:32:11.82:458,12,0	0/1:26,0:23:76.11:76,0,91	0/0:16,0:15:8.83:0,9,67	0/0:28,0:28:4.20:0,4,724	0/0:20,0:20:11.12:0,11,435	0/1:29,0:29:63.48:63,0,417	0/1:21,0:19:54.87:108,0,55	0/1:29,0:27:99:184,0,625	0/1:26,0:25:51.60:52,0,587	0/1:14,0:13:88.38:88,0,223
chr10	7109035	.	GA	G	1372.85	PASS	AB=0.806;AC=10;AF=0.179;AN=56;BaseQRankSum=6.350;DP=663;FS=27.858;HRun=10;HaplotypeScore=116.0493;InbreedingCoeff=-0.2142;MQ=61.47;MQ0=16;MQRankSum=-8.236;QD=4.69;ReadPosRankSum=-0.779;VQSLOD=-0.2221;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:48.60:0,49,531	0/0:7,0:7:15.04:0,15,166	0/0:40,0:12:24.07:0,24,203	0/0:35,2:12:18.65:0,19,169	0/0:23,0:22:51.09:0,51,548	0/0:17,0:17:42.10:0,42,456	0/0:21,0:21:48.11:0,48,520	0/0:30,1:28:66.18:0,66,730	0/0:16,1:17:14.55:0,15,350	0/0:13,0:14:29.95:0,30,314	0/0:13,0:13:39.08:0,39,419	0/1:20,12:32:99:262,0,302	0/1:15,5:20:99:150,0,254	0/1:13,6:18:99:104,0,124	0/0:15,0:14:33.09:0,33,365	0/0:11,0:11:24.06:0,24,265	0/0:26,0:24:48.11:0,48,521	0/0:19,0:19:51.14:0,51,562	0/1:21,1:20:0.96:1,0,421	0/0:22,0:22:51.10:0,51,549	0/0:13,0:12:30.08:0,30,331	0/1:18,11:29:99:229,0,207	0/1:17,10:27:99:203,0,212	0/1:35,9:44:83.72:84,0,520	0/0:17,1:18:4.02:0,4,258	0/1:30,13:42:99:340,0,432	0/1:33,6:36:99:126,0,500	0/1:16,2:18:12.98:13,0,325
chr10	7109054	.	TG	T	12813.25	PASS	AB=0.938;AC=54;AF=0.964;AN=56;BaseQRankSum=-4.420;DP=552;FS=18.283;HRun=6;HaplotypeScore=70.8976;InbreedingCoeff=0.0681;MQ=61.47;MQ0=4;MQRankSum=-2.753;QD=23.21;ReadPosRankSum=2.856;VQSLOD=3.3519;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,23:24:45.11:481,45,0	1/1:1,7:6:15.04:161,15,0	0/1:11,1:8:11.64:12,0,27	0/1:19,1:9:12.82:13,0,92	1/1:0,23:22:54.13:578,54,0	1/1:4,10:13:33.08:352,33,0	1/1:3,20:23:39.10:417,39,0	1/1:6,17:20:42.09:444,42,0	1/1:0,17:16:42.10:445,42,0	1/1:1,12:13:36.08:380,36,0	1/1:1,12:13:33.08:355,33,0	1/1:2,31:32:90.22:958,90,0	1/1:1,20:21:60.15:640,60,0	1/1:1,21:20:36.09:384,36,0	1/1:0,12:12:30.08:322,30,0	1/1:2,7:9:15.04:161,15,0	1/1:2,18:20:45.11:484,45,0	1/1:2,15:17:45.11:483,45,0	1/1:1,15:13:33.08:354,33,0	1/1:0,17:17:51.13:546,51,0	1/1:2,13:13:33.08:355,33,0	1/1:0,18:17:47.99:498,48,0	1/1:2,23:25:60.07:619,60,0	1/1:4,30:34:69.17:740,69,0	1/1:0,14:14:27.07:290,27,0	1/1:8,31:38:93.23:992,93,0	1/1:1,30:31:81.19:869,81,0	1/1:0,17:17:45.11:483,45,0
chr10	7109429	.	AGT	A	834.95	PASS	AB=0.849;AC=18;AF=0.346;AN=52;BaseQRankSum=-0.437;DP=678;FS=9.967;HRun=0;HaplotypeScore=107.4265;InbreedingCoeff=0.3402;MQ=61.94;MQ0=18;MQRankSum=1.359;QD=2.80;ReadPosRankSum=1.910;VQSLOD=1.7450;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:38:8.43:40,8,0	0/0:11,0:11:14.88:0,15,177	./.	./.	0/0:13,0:12:9.02:0,9,114	1/1:12,1:15:5.84:46,6,0	1/1:15,9:25:14.44:144,14,0	0/0:34,0:31:6.49:0,6,83	0/1:18,4:24:23.50:161,0,23	0/0:27,0:26:16.54:0,17,157	0/0:8,0:8:3.01:0,3,43	0/0:18,0:29:16.89:0,17,148	0/0:9,0:11:3.47:0,3,27	0/0:17,0:24:8.95:0,9,71	0/1:21,0:22:1.58:2,0,284	0/1:12,0:25:6.94:30,0,7	1/1:24,16:41:28.31:279,28,0	0/1:20,2:20:41.91:42,0,203	1/1:21,0:21:8.99:58,9,0	0/1:11,6:18:7.05:126,0,7	0/0:52,0:52:25.88:0,26,255	0/0:5,0:15:7.07:0,7,38	0/0:5,0:10:6:0,6,51	0/0:22,0:37:11.98:0,12,100	1/1:14,5:19:5.75:45,6,0	0/1:26,0:26:28.42:28,0,98	0/0:25,1:26:0.50:0,0,270	0/0:10,0:10:13.23:0,13,120
chr10	7110845	.	AGGAGCT	A	19417.40	PASS	AB=0.929;AC=35;AF=0.625;AN=56;BaseQRankSum=16.267;DP=588;FS=2.271;HRun=0;HaplotypeScore=144.2921;InbreedingCoeff=0.9136;MQ=89.49;MQ0=0;MQRankSum=-18.392;QD=53.05;ReadPosRankSum=0.414;VQSLOD=4.8421;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,32:33:78.27:1902,78,0	1/1:1,7:8:15.05:369,15,0	0/0:25,0:25:63.20:0,63,1827	0/0:31,0:31:84.23:0,84,2696	1/1:1,27:28:54.19:1324,54,0	1/1:1,24:25:63.22:1533,63,0	1/1:2,17:19:48.16:1173,48,0	1/1:3,24:27:72.23:1632,72,0	1/1:2,21:23:54.19:1326,54,0	1/1:1,22:23:54.19:1328,54,0	1/1:2,27:29:72.16:1708,72,0	0/0:22,0:22:66.23:0,66,2362	0/0:15,0:15:42.14:0,42,1447	0/0:21,0:21:63.22:0,63,2290	1/1:0,18:18:51.18:1247,51,0	1/1:1,15:16:39.13:960,39,0	1/1:0,16:16:39.13:942,39,0	1/1:1,9:10:15.01:315,15,0	1/1:1,9:10:27.07:614,27,0	1/1:1,20:21:63.18:1490,63,0	1/1:2,9:11:11.15:235,11,0	0/0:33,0:33:96.29:0,96,3391	0/0:19,0:19:57.20:0,57,2036	0/0:18,0:17:54.19:0,54,1937	1/1:0,23:23:51.18:1249,51,0	0/1:24,2:26:69.43:69,0,2507	0/0:29,0:29:84.27:0,84,2927	0/0:9,0:9:27.09:0,27,982
chr10	7114187	.	TTTTTTTTTGGTTC	T	4039.98	PASS	AB=1.000;AC=32;AF=0.800;AN=40;BaseQRankSum=2.614;DP=370;FS=7.536;HRun=0;HaplotypeScore=126.8409;InbreedingCoeff=0.3142;MQ=41.31;MQ0=53;MQRankSum=-1.759;QD=12.35;ReadPosRankSum=2.625;VQSLOD=1.8483;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:47,0:37:35.95:851,36,0	1/1:5,0:3:5.89:72,6,0	0/0:17,0:2:3.01:0,3,93	0/0:13,0:5:5.83:0,6,34	1/1:21,0:20:13.14:167,13,0	1/1:14,0:12:8.75:185,9,0	1/1:26,4:28:9.35:374,9,0	1/1:20,0:15:8.51:58,9,0	0/1:15,0:14:10.24:158,0,10	0/1:21,0:17:11.98:77,0,12	1/1:11,0:8:2.92:78,3,0	./.	./.	./.	1/1:16,0:16:23.77:392,24,0	1/1:13,1:14:8.54:200,9,0	1/1:35,0:30:22.37:509,22,0	1/1:24,0:21:5.61:178,6,0	1/1:23,1:22:26.86:309,27,0	0/0:2,0:2:0.89:0,1,2	1/1:17,0:13:7.56:104,8,0	./.	./.	./.	1/1:6,1:7:11.24:289,11,0	1/1:6,0:5:4.98:40,5,0	./.	./.
chr10	7114397	.	CACCTGGCTTTGTAGG	C	23363.50	PASS	AC=36;AF=0.900;AN=40;BaseQRankSum=10.209;DP=334;FS=9.980;HRun=0;HaplotypeScore=244.2839;InbreedingCoeff=0.8557;MQ=112.76;MQ0=0;MQRankSum=-11.531;QD=85.27;ReadPosRankSum=8.011;VQSLOD=2.6557;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,18:22:42.06:1647,42,0	1/1:3,6:9:14.90:683,15,0	0/0:32,0:33:92.80:0,93,5290	0/0:27,0:27:81.27:0,81,4842	1/1:2,20:22:48.16:1703,48,0	1/1:1,10:10:27.09:1230,27,0	1/1:4,11:15:30.10:1286,30,0	1/1:4,12:16:36.02:903,36,0	1/1:0,21:21:57.20:2586,57,0	1/1:6,14:20:42.14:1913,42,0	1/1:0,17:17:51.17:2119,51,0	./.	./.	./.	1/1:2,14:16:36.12:1575,36,0	1/1:3,14:17:30.10:1357,30,0	1/1:4,10:14:30.10:1266,30,0	1/1:4,9:13:21.07:877,21,0	1/1:4,8:12:24.07:797,24,0	1/1:5,18:23:51.17:2025,51,0	1/1:5,6:11:6.02:172,6,0	./.	./.	./.	1/1:3,11:14:24.08:1090,24,0	1/1:0,1:1:3.01:137,3,0	./.	./.
chr10	7114989	.	ACTCCTT	A	14909.24	PASS	AC=36;AF=0.900;AN=40;BaseQRankSum=7.069;DP=362;FS=1.295;HRun=0;HaplotypeScore=144.9111;InbreedingCoeff=0.8571;MQ=102.23;MQ0=0;MQRankSum=-10.568;QD=48.41;ReadPosRankSum=6.309;VQSLOD=4.7967;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,29:32:51.17:1164,51,0	1/1:2,8:10:24.08:548,24,0	0/0:19,0:19:48.10:0,48,1484	0/0:35,0:34:87.30:0,87,2817	1/1:2,6:8:15.05:342,15,0	1/1:1,10:11:30.10:685,30,0	1/1:5,19:24:57.20:1298,57,0	1/1:9,18:27:42.10:808,42,0	1/1:3,17:20:57.20:1300,57,0	1/1:1,13:14:36.12:822,36,0	1/1:0,3:3:6.02:137,6,0	./.	./.	./.	1/1:2,21:23:56.76:1301,57,0	1/1:2,21:23:60.20:1370,60,0	1/1:3,18:21:39.13:890,39,0	1/1:4,12:16:30.10:685,30,0	1/1:4,9:13:27.09:617,27,0	1/1:3,6:9:21.07:479,21,0	1/1:7,31:38:59.51:1368,60,0	./.	./.	./.	1/1:0,15:15:45.15:1027,45,0	1/1:0,1:1:3.01:69,3,0	./.	./.
chr10	7115747	.	CGTT	C	75.49	PASS	AC=6;AF=0.136;AN=44;BaseQRankSum=-0.961;DP=513;FS=3.261;HRun=0;HaplotypeScore=163.6376;InbreedingCoeff=0.8497;MQ=101.86;MQ0=0;MQRankSum=-2.081;QD=9.44;ReadPosRankSum=-4.134;VQSLOD=2.1733;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,150,2489	0/0:11,0:11:33.04:0,33,460	0/0:34,0:34:99:0,102,2242	0/0:24,0:24:69.20:0,69,1582	0/0:18,0:18:51.17:0,51,831	0/0:24,0:24:72.20:0,72,1139	0/0:29,0:29:87.30:0,87,1406	0/0:31,0:30:90.29:0,90,1374	0/0:38,0:38:99:0,114,1863	0/0:33,0:33:99:0,99,1519	0/0:26,0:26:78.27:0,78,1290	1/1:1,0:2:2.97:20,3,0	./.	./.	0/0:25,0:24:75.26:0,75,1214	0/0:14,0:14:42.14:0,42,675	0/0:27,0:27:72.24:0,72,1175	0/0:20,0:20:60.20:0,60,987	0/0:24,0:24:69.23:0,69,1064	0/0:19,0:19:57.19:0,57,951	0/0:30,0:30:84.29:0,84,1361	./.	1/1:1,0:1:2.97:20,3,0	./.	0/0:27,0:27:78.26:0,78,1285	1/1:0,4:5:14.98:148,15,0	./.	./.
chr10	7116179	.	TACACACAC	T	2861.57	PASS	AB=0.745;AC=17;AF=0.304;AN=56;BaseQRankSum=-0.944;DP=688;FS=8.395;HRun=0;HaplotypeScore=184.4403;InbreedingCoeff=0.3181;MQ=72.47;MQ0=4;MQRankSum=-4.122;QD=8.59;ReadPosRankSum=0.699;VQSLOD=2.0901;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:30,2:33:99:177,0,106	1/1:13,2:19:30.49:470,30,0	0/0:36,0:27:8.96:0,9,69	0/0:36,0:29:7.35:0,7,52	1/1:7,8:15:5.85:152,6,0	0/1:6,0:15:56.67:57,0,158	0/1:17,0:30:20.01:20,0,169	0/1:30,0:30:37.87:128,0,38	0/0:9,0:19:18.06:0,18,176	1/1:4,19:22:41.83:800,42,0	0/1:9,9:18:3.02:201,0,3	0/0:18,0:21:18.03:0,18,411	0/0:17,0:17:14.80:0,15,464	0/0:20,0:21:11.84:0,12,358	1/1:12,21:34:8.98:715,9,0	0/0:16,0:22:17.76:0,18,155	0/1:19,1:38:19.18:19,0,367	1/1:9,9:18:9.85:229,10,0	0/0:12,0:15:7.56:0,8,62	0/0:15,0:20:25.35:0,25,350	0/1:29,30:59:14.33:70,0,14	0/0:21,0:21:14.53:0,15,443	0/0:8,0:14:2.30:0,2,117	0/0:16,0:25:1.25:0,1,3	0/0:21,0:31:17.15:0,17,259	0/0:24,0:24:42.11:0,42,1322	0/0:25,0:24:30.10:0,30,923	0/0:5,0:4:6.02:0,6,179
chr10	7117080	.	TTTTG	T	9435.99	PASS	AB=0.881;AC=46;AF=0.821;AN=56;BaseQRankSum=-4.240;DP=651;FS=28.202;HRun=0;HaplotypeScore=120.3142;InbreedingCoeff=0.2553;MQ=61.13;MQ0=10;MQRankSum=-0.216;QD=16.70;ReadPosRankSum=1.257;VQSLOD=2.7958;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:49,0:49:51.50:339,51,0	1/1:13,4:17:49.18:608,49,0	0/0:42,0:17:1.88:0,2,272	0/0:31,0:14:2.50:0,2,106	1/1:29,9:38:90.19:1136,90,0	1/1:2,15:16:9.03:164,9,0	1/1:16,1:16:42.02:567,42,0	1/1:10,25:35:52.28:836,52,0	1/1:2,10:12:9.03:167,9,0	1/1:7,23:30:73.09:1083,73,0	1/1:2,22:24:53:672,53,0	0/0:13,0:13:0.72:0,1,16	0/1:11,0:11:10.76:11,0,14	1/1:20,0:20:5.91:125,6,0	1/1:4,11:15:1.34:296,1,0	1/1:0,21:21:26.84:493,27,0	1/1:3,30:33:25.24:472,25,0	0/1:2,21:22:11.10:126,0,11	1/1:16,3:17:48.92:632,49,0	1/1:8,20:28:59.28:750,59,0	1/1:1,7:8:5.63:30,6,0	1/1:17,0:17:26.57:138,27,0	0/1:26,0:26:24.28:114,0,24	0/1:13,0:13:1.62:59,0,2	1/1:3,18:21:18.05:303,18,0	1/1:31,0:31:28.92:170,29,0	1/1:26,0:25:13.14:137,13,0	1/1:14,0:14:0.42:6,0,0
chr10	7117081	.	TTTG	T	8668.36	PASS	AB=0.979;AC=49;AF=0.875;AN=56;BaseQRankSum=-3.522;DP=650;FS=24.684;HRun=0;HaplotypeScore=115.7388;InbreedingCoeff=0.4631;MQ=60.86;MQ0=10;MQRankSum=0.728;QD=15.05;ReadPosRankSum=3.166;VQSLOD=2.7567;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,43:48:54.03:787,54,0	1/1:18,0:18:50.33:451,50,0	0/0:42,0:16:16.56:0,17,286	0/0:32,0:15:7.74:0,8,129	1/1:36,1:37:86.50:891,87,0	1/1:17,0:16:9.02:99,9,0	1/1:17,0:16:39.60:372,40,0	1/1:34,1:35:39.18:558,39,0	1/1:12,0:12:9.02:102,9,0	1/1:29,0:29:65.63:689,66,0	1/1:23,1:24:48.38:418,48,0	1/1:13,0:13:5.90:38,6,0	0/1:10,0:10:4.19:81,0,4	1/1:20,0:20:51.20:325,51,0	0/1:14,1:15:3.33:191,0,3	1/1:21,0:21:26.90:297,27,0	1/1:32,1:33:28.97:314,29,0	0/1:23,0:22:16.57:76,0,17	1/1:19,0:17:47.97:420,48,0	1/1:26,3:29:61.88:559,62,0	1/1:7,1:8:5.55:29,6,0	1/1:15,1:16:38.45:276,38,0	1/1:26,0:26:36.44:377,36,0	1/1:14,0:14:23.83:205,24,0	1/1:19,2:21:18.03:191,18,0	1/1:31,0:31:68.93:469,69,0	1/1:26,0:25:56.43:381,56,0	1/1:14,0:14:13.55:75,14,0
chr10	7117082	.	TTG	T	9829.23	PASS	AB=1.000;AC=51;AF=0.911;AN=56;BaseQRankSum=-3.611;DP=646;FS=35.346;HRun=0;HaplotypeScore=102.8917;InbreedingCoeff=0.6490;MQ=60.70;MQ0=10;MQRankSum=0.803;QD=17.18;ReadPosRankSum=4.503;VQSLOD=2.5577;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:46,2:48:53.92:509,54,0	1/1:18,0:18:49.25:416,49,0	0/0:42,0:16:32.49:0,32,295	0/0:31,0:14:11.95:0,12,94	1/1:35,1:36:92.09:733,92,0	1/1:17,0:16:9.01:82,9,0	1/1:17,0:16:39.46:313,39,0	1/1:35,0:35:28.51:451,29,0	1/1:12,0:12:9.01:85,9,0	1/1:25,3:28:64.21:589,64,0	1/1:24,0:24:45.69:350,46,0	1/1:1,12:13:11.71:136,12,0	1/1:6,4:10:14.69:275,15,0	1/1:18,2:20:59.47:671,59,0	1/1:14,0:14:7.14:160,7,0	1/1:21,0:21:26.92:245,27,0	1/1:33,0:33:29.53:278,30,0	0/1:23,0:22:17.09:59,0,17	1/1:19,0:17:45.75:351,46,0	1/1:28,1:29:60.02:459,60,0	1/1:8,0:8:5.63:30,6,0	1/1:5,11:16:38.91:422,39,0	1/1:22,4:26:71.68:775,72,0	1/1:10,4:14:34.46:387,34,0	1/1:21,0:21:17.99:160,18,0	1/1:6,25:31:77.97:959,78,0	1/1:22,3:24:69.13:723,69,0	1/1:3,11:14:15.05:211,15,0
chr10	7117083	.	TG	T	7903.65	PASS	AB=0.958;AC=51;AF=0.911;AN=56;BaseQRankSum=-3.000;DP=636;FS=57.734;HRun=1;HaplotypeScore=101.1556;InbreedingCoeff=0.6138;MQ=59.77;MQ0=10;MQRankSum=0.840;QD=14.06;ReadPosRankSum=6.332;VQSLOD=1.4277;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:47,1:48:53.48:405,53,0	1/1:16,2:18:42.36:360,42,0	0/0:41,1:15:24.52:0,25,221	0/0:31,1:13:11.03:0,11,98	1/1:36,1:37:57.15:617,57,0	1/1:16,0:15:8.95:66,9,0	1/1:15,1:15:24.20:270,24,0	1/1:33,0:34:5.79:366,6,0	1/1:11,0:11:8.96:68,9,0	1/1:28,0:28:52.16:498,52,0	1/1:24,0:24:42.92:295,43,0	1/1:13,0:13:11.85:104,12,0	1/1:10,0:10:25.17:196,25,0	1/1:19,1:20:59.78:529,60,0	1/1:13,1:14:6.45:118,6,0	1/1:21,0:21:26.81:197,27,0	1/1:33,0:33:29.60:226,30,0	0/1:22,1:22:23.15:48,0,23	1/1:19,0:17:21.69:287,22,0	1/1:25,1:26:58.37:412,58,0	1/1:8,0:8:5.63:30,6,0	1/1:12,2:14:38.78:297,39,0	1/1:25,1:26:72.55:616,73,0	1/1:13,1:14:34.92:328,35,0	1/1:21,0:21:17.90:133,18,0	1/1:25,4:29:77.62:677,78,0	1/1:23,2:24:69.18:642,69,0	1/1:12,2:14:14.68:118,15,0
chr10	7117908	.	AC	A	1452.21	PASS	AB=0.849;AC=19;AF=0.339;AN=56;BaseQRankSum=13.017;DP=869;FS=123.045;HRun=1;HaplotypeScore=262.1610;InbreedingCoeff=-0.3300;MQ=37.74;MQ0=11;MQRankSum=-10.420;QD=2.35;ReadPosRankSum=2.668;VQSLOD=-0.2677;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:9.43:0,9,188	0/0:26,0:26:21.04:0,21,295	0/0:30,0:12:32.92:0,33,433	0/0:21,0:11:22.71:0,23,376	0/1:28,17:45:46.45:46,0,211	0/1:28,1:29:0.53:1,0,312	0/1:11,3:14:2.82:3,0,266	0/0:24,0:21:7.12:0,7,673	0/0:23,1:23:19.49:0,19,333	0/1:32,13:45:99:493,0,725	0/1:33,14:47:34.77:50,0,35	0/1:19,1:20:35.90:36,0,207	1/1:20,9:29:10.22:83,10,0	0/0:16,6:22:6.02:0,6,86	0/1:37,5:42:1.09:1,0,222	0/0:29,9:38:18.06:0,18,288	0/1:21,2:23:30.41:30,0,399	0/1:13,0:13:14.83:15,0,415	0/1:22,2:23:99:159,0,557	0/1:42,25:67:99:194,0,361	0/0:15,0:13:33.11:0,33,527	0/1:43,18:61:53.40:53,0,154	0/1:31,10:41:34.64:35,0,169	0/0:20,4:24:7.89:0,8,142	0/1:28,9:37:7.96:8,0,82	0/1:26,2:27:91.88:92,0,696	0/1:31,7:38:99:214,0,465	0/1:12,4:16:94.42:94,0,213
chr10	7117909	.	CT	C	1725.63	PASS	AB=0.824;AC=20;AF=0.357;AN=56;BaseQRankSum=11.914;DP=867;FS=119.460;HRun=1;HaplotypeScore=265.2187;InbreedingCoeff=-0.3707;MQ=37.54;MQ0=11;MQRankSum=-10.300;QD=2.68;ReadPosRankSum=2.889;VQSLOD=0.2786;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:26:9.43:0,9,187	0/0:18,0:25:17.99:0,18,233	0/0:29,0:11:25:0,25,368	0/0:19,0:11:25.79:0,26,378	0/1:33,10:45:46.71:47,0,169	0/1:23,6:29:0.53:1,0,311	0/1:12,1:14:2.84:3,0,265	0/1:17,5:21:30.87:31,0,664	0/0:18,6:23:14.03:0,14,325	0/1:35,10:46:99:612,0,761	0/1:35,11:47:34.77:50,0,35	0/1:15,4:20:68.82:69,0,192	1/1:25,3:28:9.47:103,9,0	0/0:20,2:22:5.99:0,6,69	0/1:31,11:42:1.14:1,0,223	0/0:32,6:38:18.06:0,18,287	0/1:19,3:23:42.62:43,0,404	0/1:11,2:13:34.64:35,0,380	0/1:17,6:23:99:157,0,558	0/1:49,17:67:99:187,0,342	0/0:15,0:13:32.84:0,33,526	0/1:39,21:61:48.61:49,0,142	0/1:30,11:41:31.81:32,0,171	0/0:21,2:24:8.80:0,9,143	0/1:19,19:38:8.01:8,0,65	0/1:20,7:27:99:135,0,694	0/1:22,5:38:99:236,0,457	0/1:10,1:16:85.47:85,0,213
chr10	7120013	.	AC	A	5438.16	PASS	AB=0.909;AC=21;AF=0.375;AN=56;BaseQRankSum=15.022;DP=1079;FS=32.377;HRun=1;HaplotypeScore=484.2534;InbreedingCoeff=-0.6165;MQ=29.29;MQ0=47;MQRankSum=-3.020;QD=6.96;ReadPosRankSum=1.046;VQSLOD=1.8737;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,1:19:13.47:0,13,173	0/1:8,16:24:99:143,0,113	0/0:70,0:5:15.05:0,15,240	0/0:91,0:7:8.34:0,8,266	0/1:36,9:44:99:422,0,224	0/1:26,0:26:99:136,0,437	0/1:25,1:26:43.52:44,0,203	0/0:50,0:43:36.98:0,37,1198	0/1:37,0:35:9.83:10,0,744	0/1:56,14:66:99:1170,0,412	0/1:28,3:30:60.93:256,0,61	0/1:31,1:32:99:251,0,495	0/1:39,1:40:75.30:75,0,804	0/1:30,0:29:8.78:9,0,264	0/1:37,1:35:72.64:73,0,478	0/1:37,0:37:16.53:17,0,562	0/0:9,0:9:1.79:0,2,102	0/1:8,1:8:61.93:67,0,62	0/0:36,0:21:48.73:0,49,568	0/1:34,11:45:99:476,0,456	0/1:27,0:21:7.64:8,0,37	0/1:51,10:61:99:615,0,620	0/1:35,9:44:99:480,0,353	0/0:20,2:22:8.02:0,8,108	0/1:39,13:52:99:632,0,342	0/1:37,3:39:99:158,0,807	0/1:49,2:51:99:350,0,816	0/1:15,1:16:48.97:49,0,357
chr10	7120014	.	CT	C	4349.27	PASS	AB=0.917;AC=20;AF=0.357;AN=56;BaseQRankSum=16.385;DP=1078;FS=61.181;HRun=1;HaplotypeScore=485.8076;InbreedingCoeff=-0.5531;MQ=29.41;MQ0=47;MQRankSum=-2.277;QD=5.69;ReadPosRankSum=-0.563;VQSLOD=1.7382;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,2:19:18.94:0,19,205	0/1:24,0:24:99:164,0,111	0/0:70,1:5:15.05:0,15,239	0/0:92,1:7:7.27:0,7,256	0/1:41,1:44:99:286,0,221	0/1:24,0:26:53.47:53,0,401	0/1:20,4:26:58.99:59,0,194	0/1:46,1:41:27.54:28,0,1206	0/0:36,0:35:14.64:0,15,718	0/1:54,7:65:99:1007,0,404	0/1:14,13:30:61.05:193,0,61	0/1:22,9:32:99:153,0,490	0/1:35,3:40:7.69:8,0,871	0/0:27,2:29:15.69:0,16,251	0/1:30,3:34:82.05:82,0,472	0/1:36,0:38:2.29:2,0,524	0/0:7,1:8:7.90:0,8,101	0/1:8,2:9:62.98:112,0,63	0/0:31,0:17:25.82:0,26,532	0/1:43,0:46:99:287,0,434	0/1:19,8:21:24.91:25,0,33	0/1:49,7:61:99:421,0,633	0/1:35,4:44:99:338,0,306	0/0:19,4:23:11.67:0,12,155	0/1:46,0:52:99:466,0,334	0/1:33,3:40:99:211,0,922	0/1:39,5:51:99:373,0,852	0/1:14,0:16:79.23:79,0,342
chr10	7120015	.	T	TACAC	1537.81	PASS	AB=0.979;AC=18;AF=0.321;AN=56;BaseQRankSum=12.339;DP=1096;FS=22.313;HRun=0;HaplotypeScore=537.1052;InbreedingCoeff=-0.0852;MQ=29.45;MQ0=49;MQRankSum=-1.615;QD=2.61;ReadPosRankSum=-0.883;VQSLOD=-0.2534;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:20:16.91:0,17,183	1/1:24,0:24:9:93,9,0	0/0:70,0:5:11.98:0,12,148	0/0:94,0:7:10.87:0,11,142	0/1:47,0:46:52.58:53,0,77	0/0:27,0:27:25.60:0,26,177	0/1:26,0:26:16.85:17,0,75	0/0:49,0:42:23.61:0,24,527	0/0:37,0:35:34.48:0,34,250	0/1:65,3:65:91.74:883,0,92	1/1:30,1:31:2.31:112,2,0	0/0:32,0:32:32.45:0,32,401	0/0:40,0:40:53.45:0,53,787	0/0:31,0:30:30.44:0,30,430	0/1:39,0:36:49.01:49,0,60	0/0:38,0:38:11.81:0,12,166	0/0:9,0:9:9.50:0,9,50	0/1:9,0:9:32.36:69,0,32	0/0:32,0:17:43.48:0,43,312	0/1:45,1:46:17.55:18,0,125	1/1:30,0:24:4.37:15,4,0	0/1:60,0:61:73.58:74,0,618	0/1:43,0:44:43.09:43,0,392	0/0:24,0:24:9.77:0,10,109	0/1:51,1:52:99:128,0,103	0/1:40,0:41:71.23:71,0,721	0/1:52,0:52:66.32:66,0,885	0/1:16,0:16:12.53:13,0,360
chr10	7120021	.	CACAT	C	757.33	PASS	AB=0.953;AC=10;AF=0.179;AN=56;BaseQRankSum=1.292;DP=1115;FS=1.481;HRun=0;HaplotypeScore=534.3459;InbreedingCoeff=0.0076;MQ=30.37;MQ0=47;MQRankSum=0.118;QD=2.40;ReadPosRankSum=-1.337;VQSLOD=-0.1570;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:20:23.35:0,23,130	0/1:22,2:24:63.21:63,0,69	0/0:70,0:5:5.95:0,6,159	0/0:95,0:7:4.82:0,5,99	0/1:46,4:49:0.28:0,0,96	0/0:29,0:29:9.82:0,10,465	0/0:28,0:28:22.92:0,23,294	0/1:51,0:44:96.51:97,0,760	0/0:37,0:36:56.78:0,57,485	0/1:68,3:67:99:445,0,766	0/1:25,2:26:39.54:43,0,40	0/0:33,0:33:53.28:0,53,789	0/0:39,0:39:77.87:0,78,1266	0/0:31,0:30:35.56:0,36,877	0/1:39,1:37:33.01:33,0,173	0/0:39,0:39:28.47:0,28,604	0/1:10,0:10:25.20:25,0,73	0/1:9,1:9:47.38:97,0,47	0/0:27,0:15:43.37:0,43,603	0/0:46,0:46:74.93:0,75,663	1/1:33,0:26:11.45:96,11,0	0/0:62,0:63:72.95:0,73,1301	0/0:47,0:46:53.42:0,53,787	0/0:24,0:24:12.96:0,13,304	0/0:55,0:55:75.08:0,75,609	0/0:42,0:41:79.52:0,80,1729	0/0:54,0:54:99:0,104,1810	0/0:18,0:18:30.81:0,31,691
chr10	7120025	.	T	TAC	6174.69	PASS	AB=0.986;AC=37;AF=0.661;AN=56;BaseQRankSum=1.041;DP=1121;FS=30.934;HRun=0;HaplotypeScore=507.1032;InbreedingCoeff=0.0876;MQ=31.06;MQ0=44;MQRankSum=-4.096;QD=6.80;ReadPosRankSum=-0.345;VQSLOD=3.2284;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:21:18.77:0,19,82	1/1:22,0:23:15.78:153,16,0	0/0:66,0:5:7.89:0,8,83	0/0:95,0:7:3.40:0,3,18	0/1:42,0:46:0.26:21,0,0	1/1:20,10:30:48.14:699,48,0	1/1:19,11:30:40.32:558,40,0	0/1:51,0:44:12.27:150,0,12	1/1:24,12:35:36.11:501,36,0	0/1:68,0:70:8.79:536,0,9	1/1:25,0:24:14.45:154,14,0	0/1:34,0:34:65.90:66,0,281	0/1:38,0:38:73.96:74,0,470	0/0:29,0:29:28.56:0,29,426	1/1:37,0:38:27.06:289,27,0	1/1:28,14:42:40.50:793,41,0	1/1:7,2:9:12.04:173,12,0	1/1:10,0:9:7.43:21,7,0	1/1:24,6:18:26.57:372,27,0	1/1:39,9:48:26.07:572,26,0	1/1:32,0:28:6.51:46,7,0	0/1:63,0:63:99:115,0,523	0/1:47,0:46:36.94:37,0,275	0/1:26,0:26:19.76:20,0,129	1/1:47,8:55:29.30:474,29,0	0/1:42,0:41:99:150,0,546	0/1:54,0:55:99:122,0,725	0/1:20,0:20:79.10:79,0,347
chr10	7120027	.	C	CAA	7634.67	PASS	AB=0.918;AC=35;AF=0.625;AN=56;BaseQRankSum=1.128;DP=1121;FS=120.360;HRun=1;HaplotypeScore=501.1927;InbreedingCoeff=-0.3129;MQ=30.42;MQ0=41;MQRankSum=-5.047;QD=7.91;ReadPosRankSum=-3.636;VQSLOD=1.2859;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:22:60.89:61,0,83	1/1:18,4:22:11.48:207,11,0	0/0:65,0:5:12.02:0,12,159	0/0:90,0:7:14.91:0,15,123	1/1:42,5:46:30.36:193,30,0	1/1:27,4:31:59.64:595,60,0	1/1:29,1:30:50.94:437,51,0	0/1:45,5:43:99:307,0,445	1/1:28,9:36:80.12:724,80,0	0/1:65,8:71:99:410,0,533	0/1:23,2:24:12.10:125,0,12	0/1:30,3:33:99:175,0,377	0/1:33,5:38:99:317,0,595	0/1:27,3:29:3.88:4,0,498	1/1:26,15:38:36.43:640,36,0	1/1:28,13:41:53.78:795,54,0	1/1:10,0:10:2.18:152,2,0	0/1:10,0:9:25.92:26,0,92	0/1:29,1:20:19.17:324,0,19	0/1:41,9:50:23.98:567,0,24	0/1:32,1:28:44.47:44,0,75	0/1:58,5:63:99:231,0,711	0/1:45,4:48:99:144,0,381	0/1:23,3:26:66.50:67,0,160	1/1:51,4:55:2.77:418,3,0	0/1:34,7:41:99:297,0,753	0/1:53,4:57:99:246,0,1044	0/1:16,4:20:99:129,0,449
chr10	7120031	.	C	CAA	3148.04	PASS	AB=0.995;AC=26;AF=0.464;AN=56;BaseQRankSum=6.455;DP=1101;FS=102.092;HRun=1;HaplotypeScore=505.0998;InbreedingCoeff=-0.1969;MQ=30.84;MQ0=38;MQRankSum=-3.546;QD=3.89;ReadPosRankSum=3.391;VQSLOD=-0.1653;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:22:16.47:0,16,188	0/1:20,1:21:30.20:49,0,30	0/0:63,0:5:12.02:0,12,157	0/0:80,0:8:14.04:0,14,143	1/1:48,2:49:0.57:45,1,0	1/1:31,0:31:26.57:378,27,0	1/1:30,0:30:18.51:271,19,0	0/0:49,0:42:50.69:0,51,592	0/1:37,0:36:7.77:242,0,8	0/1:72,0:70:99:209,0,429	1/1:20,2:21:1.02:79,1,0	0/1:33,0:33:74.14:74,0,382	0/1:39,0:39:23.73:24,0,680	0/0:31,0:30:29.91:0,30,559	0/1:40,0:37:38.71:102,0,39	0/1:41,0:41:28.02:372,0,28	0/1:10,0:10:3.16:81,0,3	0/0:10,0:9:18.83:0,19,106	0/1:27,0:20:99:154,0,173	0/1:49,1:50:72.77:341,0,73	0/0:32,0:27:18.05:0,18,128	0/1:64,0:64:99:164,0,675	0/1:44,1:44:99:134,0,325	0/1:26,0:26:2.20:2,0,168	1/1:55,1:56:2.89:348,3,0	0/1:40,0:40:70.49:70,0,806	0/1:56,0:56:99:142,0,1067	0/1:20,0:20:32.88:33,0,451
chr10	7120892	.	A	AACACACACACACAC	12071.38	PASS	AB=0.843;AC=52;AF=0.929;AN=56;BaseQRankSum=-3.591;DP=694;FS=0.000;HRun=0;HaplotypeScore=243.9345;InbreedingCoeff=0.2071;MQ=54.57;MQ0=13;MQRankSum=1.415;QD=18.46;ReadPosRankSum=3.177;VQSLOD=3.0896;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:34,0:39:11.62:196,12,0	1/1:6,5:11:2.93:200,3,0	0/1:42,0:19:0:0,0,0	0/0:40,0:20:2.68:0,3,11	1/1:23,0:22:8.97:158,9,0	1/1:12,7:19:4.37:203,4,0	1/1:23,0:23:10.02:276,10,0	1/1:28,0:26:7.46:447,7,0	1/1:20,0:20:11.98:342,12,0	1/1:31,0:31:69.21:1705,69,0	1/1:12,0:12:2.95:98,3,0	1/1:19,0:30:20.51:781,21,0	1/1:19,11:36:24.08:830,24,0	0/1:13,8:24:11.32:193,0,11	1/1:21,13:37:2.10:108,2,0	1/1:21,6:31:12.80:581,13,0	1/1:11,0:17:12.43:438,12,0	1/1:11,4:16:23.95:768,24,0	1/1:21,0:20:24.45:556,24,0	1/1:13,0:12:9.03:340,9,0	1/1:41,0:40:33.46:593,33,0	1/1:5,0:13:2.68:102,3,0	1/1:10,0:10:2.60:109,3,0	1/1:35,0:35:27.45:361,27,0	1/1:13,7:23:8.95:467,9,0	1/1:10,0:23:44.26:898,44,0	1/1:21,0:20:39.13:943,39,0	1/1:8,0:10:18.06:379,18,0
chr10	7122261	.	AAAAAGAAAG	A	4044.41	PASS	AB=0.879;AC=19;AF=0.339;AN=56;BaseQRankSum=-4.136;DP=533;FS=6.272;HRun=0;HaplotypeScore=164.0867;InbreedingCoeff=0.6687;MQ=43.48;MQ0=16;MQRankSum=2.213;QD=20.53;ReadPosRankSum=-6.691;VQSLOD=-0.3125;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:27:99:134,0,297	0/0:10,0:10:10.72:0,11,368	0/0:24,0:7:14.97:0,15,369	0/0:29,0:8:3.47:0,3,106	0/0:45,0:43:34.95:0,35,1083	0/0:18,0:18:30.28:0,30,422	0/0:9,0:9:12.07:0,12,256	0/0:19,0:18:25.49:0,25,118	0/0:19,0:19:3.42:0,3,338	0/0:21,0:20:20.75:0,21,386	0/0:28,0:28:47.50:0,47,848	1/1:18,0:18:35.88:565,36,0	1/1:13,0:12:23.70:338,24,0	1/1:11,1:12:17.59:510,18,0	0/1:18,0:17:7.22:7,0,311	0/0:14,0:14:32.29:0,32,649	0/0:16,0:16:19.19:0,19,348	0/0:11,0:11:11.64:0,12,214	0/0:16,0:16:32.37:0,32,379	0/0:26,0:26:32.30:0,32,631	0/0:3,0:3:1.66:0,2,79	1/1:6,14:20:17.87:314,18,0	1/1:27,0:26:11.08:507,11,0	1/1:9,0:8:17.64:248,18,0	0/0:27,0:28:47.95:0,48,725	1/1:25,1:26:24.80:727,25,0	1/1:13,0:12:27.24:429,27,0	0/1:6,8:14:83.99:265,0,84
chr10	7122265	.	AG	A	7244.81	PASS	AB=0.940;AC=52;AF=0.929;AN=56;BaseQRankSum=-0.624;DP=524;FS=15.900;HRun=1;HaplotypeScore=83.9755;InbreedingCoeff=0.4718;MQ=42.19;MQ0=15;MQRankSum=0.283;QD=14.49;ReadPosRankSum=-0.011;VQSLOD=3.0578;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:26,1:27:75.07:517,75,0	1/1:11,0:11:25.93:171,26,0	0/0:23,1:9:20.72:0,21,158	0/1:26,1:7:13.59:14,0,16	1/1:44,0:42:89.13:552,89,0	1/1:18,1:19:47.34:298,47,0	1/1:6,3:9:26.73:190,27,0	1/1:20,0:19:50.98:354,51,0	1/1:15,3:18:50.63:374,51,0	1/1:19,0:18:42.97:314,43,0	1/1:30,0:30:55.31:406,55,0	1/1:17,0:18:44.14:292,44,0	1/1:9,2:10:19.44:123,19,0	1/1:10,0:12:27.92:187,28,0	1/1:17,0:16:25.16:159,25,0	1/1:11,3:15:42.91:308,43,0	1/1:17,0:17:38.30:272,38,0	1/1:12,1:13:28.59:196,29,0	1/1:17,0:17:45.49:313,45,0	1/1:24,1:25:60.22:449,60,0	1/1:4,0:4:9.43:70,9,0	1/1:16,0:17:16.99:101,17,0	1/1:21,2:22:31.91:328,32,0	1/1:10,0:9:22.24:141,22,0	1/1:27,2:29:79.09:535,79,0	1/1:23,0:24:50.24:378,50,0	1/1:10,1:12:28.95:178,29,0	0/1:10,1:11:9.24:26,0,9
chr10	7124433	.	GTCTGTCTC	G	12593.39	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=-13.354;DP=835;FS=2.525;HRun=0;HaplotypeScore=233.5582;InbreedingCoeff=0.9382;MQ=58.96;MQ0=32;MQRankSum=-5.453;QD=27.86;ReadPosRankSum=-1.671;VQSLOD=4.0404;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:39:15.77:0,16,261	1/1:0,11:11:18.06:505,18,0	0/0:35,0:16:28.94:0,29,339	0/0:36,0:23:38.35:0,38,569	1/1:2,25:25:5.58:168,6,0	1/1:2,25:26:9.46:887,9,0	1/1:3,25:28:30.10:810,30,0	1/1:4,40:44:99:1126,116,0	1/1:2,32:33:45.15:1255,45,0	1/1:0,40:40:99:1969,120,0	1/1:1,20:20:10.86:268,11,0	0/0:34,0:34:71.77:0,72,1249	0/0:22,0:22:42.10:0,42,721	0/0:27,0:26:48.14:0,48,868	1/1:2,27:27:33.11:924,33,0	1/1:4,30:33:59.94:1650,60,0	1/1:0,28:28:20.80:522,21,0	1/1:1,18:18:21.07:588,21,0	1/1:5,13:15:35.82:380,36,0	1/1:0,28:28:23.74:638,24,0	1/1:2,31:33:3:84,3,0	0/0:35,0:32:72.67:0,73,1266	0/0:32,0:30:60.14:0,60,1023	0/0:42,0:40:84.21:0,84,1403	1/1:3,28:29:30.10:821,30,0	0/0:35,0:34:39.32:0,39,1317	0/0:30,0:29:69.15:0,69,1112	0/0:11,0:10:12.01:0,12,191
chr10	7124435	.	CTG	C	10322.27	PASS	AB=1.000;AC=45;AF=0.804;AN=56;BaseQRankSum=-1.848;DP=819;FS=0.462;HRun=0;HaplotypeScore=181.0371;InbreedingCoeff=0.3868;MQ=57.64;MQ0=31;MQRankSum=-7.125;QD=14.66;ReadPosRankSum=10.573;VQSLOD=3.7111;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:40:14.96:0,15,111	1/1:11,0:11:17.65:109,18,0	0/0:35,0:16:32:0,32,325	0/0:34,1:21:34.60:0,35,479	1/1:27,0:25:5.78:37,6,0	1/1:27,0:26:34.26:200,34,0	1/1:25,0:25:29.32:177,29,0	0/1:42,0:42:99:196,0,531	1/1:34,0:33:43.92:271,44,0	0/1:40,0:40:99:378,0,257	0/1:21,0:20:24.70:43,0,25	1/1:0,34:34:72.24:1094,72,0	1/1:2,20:22:42.13:636,42,0	1/1:1,26:26:48.16:730,48,0	1/1:29,0:27:32.32:198,32,0	1/1:32,0:31:57.14:347,57,0	0/1:28,0:28:16.11:88,0,16	1/1:19,0:18:20.53:126,21,0	0/1:17,0:14:32.42:32,0,219	1/1:28,0:28:23.48:152,23,0	1/1:32,0:31:2.94:18,3,0	1/1:3,31:31:66.97:1045,67,0	1/1:3,29:30:60.12:912,60,0	1/1:4,36:38:46.57:1097,47,0	1/1:31,0:29:29.32:177,29,0	1/1:2,31:32:50.01:1066,50,0	1/1:1,28:28:68.97:1012,69,0	1/1:1,9:9:12.04:182,12,0
chr10	7124439	.	C	CTGTCTG	144.21	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=-6.417;DP=827;FS=33.808;HRun=0;HaplotypeScore=255.4145;InbreedingCoeff=0.1668;MQ=59.88;MQ0=30;MQRankSum=1.575;QD=1.20;ReadPosRankSum=-5.015;VQSLOD=0.1756;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,39:44:6.02:219,6,0	0/0:11,0:11:18.06:0,18,253	0/0:32,0:15:35.79:0,36,391	0/0:40,0:25:53.76:0,54,649	0/0:27,0:25:5.68:0,6,84	0/0:27,0:26:33.31:0,33,424	0/0:26,0:26:27.06:0,27,351	0/0:40,0:40:82.31:0,82,469	0/0:34,0:33:42.61:0,43,591	0/0:40,0:40:99:0,100,825	0/0:21,0:20:10.83:0,11,147	0/1:33,0:33:11.06:11,0,857	0/0:24,0:24:10.83:0,11,595	0/0:28,0:27:15.50:0,16,751	0/0:29,0:27:33.11:0,33,456	0/0:32,0:31:59.92:0,60,812	0/0:28,0:28:20.77:0,21,275	0/0:19,0:18:21.05:0,21,274	0/0:17,0:14:31.52:0,32,201	0/0:28,0:28:20.32:0,20,276	0/0:31,0:30:3.01:0,3,31	0/0:34,0:31:34.95:0,35,937	0/0:31,0:29:0.45:0,0,604	0/0:43,0:41:28.37:0,28,1198	0/0:31,0:29:30.10:0,30,423	0/0:34,0:33:0.91:0,1,987	0/1:29,0:28:9.19:9,0,859	0/1:10,0:9:8.23:8,0,151
chr10	7124935	.	C	CTT	13848.48	PASS	AB=0.909;AC=33;AF=0.589;AN=56;BaseQRankSum=-9.900;DP=500;FS=0.000;HRun=3;HaplotypeScore=67.9760;InbreedingCoeff=0.9252;MQ=84.47;MQ0=0;MQRankSum=-3.723;QD=43.82;ReadPosRankSum=1.014;VQSLOD=4.3651;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:75.25:0,75,1049	1/1:1,11:12:30.10:537,30,0	0/0:14,0:14:42.14:0,42,575	0/0:16,0:16:39.13:0,39,540	1/1:1,9:10:27.09:495,27,0	1/1:1,13:14:36.12:658,36,0	1/1:1,15:17:39.13:715,39,0	1/1:2,27:30:84.28:1504,84,0	1/1:1,20:21:57.20:1039,57,0	1/1:1,16:17:45.15:816,45,0	1/1:1,6:8:21.07:363,21,0	0/0:17,0:17:48.15:0,48,655	0/0:17,0:17:48.13:0,48,638	0/0:15,0:15:45.15:0,45,630	1/1:1,15:16:36.12:660,36,0	1/1:1,14:15:42.14:770,42,0	1/1:2,28:30:72.25:1320,72,0	1/1:0,29:29:69.24:1265,69,0	1/1:3,15:19:48.16:861,48,0	1/1:2,19:21:57.12:1030,57,0	1/1:3,19:22:54.19:990,54,0	0/0:10,0:10:27.09:0,27,378	0/0:16,0:16:39.13:0,39,546	0/0:22,0:22:63.21:0,63,881	1/1:0,15:15:42.14:770,42,0	0/1:18,2:20:52.65:53,0,656	0/0:17,0:17:45.10:0,45,591	0/0:15,0:15:42.14:0,42,588
chr10	7126867	.	C	CTCTG	18314.36	PASS	AB=0.667;AC=31;AF=0.554;AN=56;BaseQRankSum=-17.932;DP=831;FS=1.003;HRun=0;HaplotypeScore=118.7685;InbreedingCoeff=0.8937;MQ=64.84;MQ0=5;MQRankSum=-0.478;QD=40.08;ReadPosRankSum=1.710;VQSLOD=5.1930;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,135,2111	1/1:2,9:11:24.08:591,24,0	0/0:38,0:27:32.53:0,33,392	0/0:37,0:26:18.58:0,19,244	1/1:7,20:28:1.27:1115,1,0	1/1:5,13:20:30.10:739,30,0	1/1:7,24:31:39.13:961,39,0	1/1:9,17:31:56.99:810,57,0	1/1:7,22:30:48.16:1183,48,0	1/1:4,28:33:84.25:1822,84,0	1/1:2,19:21:39.13:961,39,0	0/0:29,0:29:69.21:0,69,1093	0/0:20,0:20:54.15:0,54,845	0/0:20,0:20:51.17:0,51,845	1/1:4,24:28:57.20:1405,57,0	1/1:8,23:34:63.22:1548,63,0	1/1:9,28:41:63.22:1552,63,0	1/1:9,26:38:53.74:1540,54,0	0/1:11,10:21:15.95:668,0,16	1/1:5,23:30:48.10:1127,48,0	1/1:12,25:37:45.15:1109,45,0	0/0:32,0:32:75.19:0,75,1181	0/0:29,0:28:60.20:0,60,989	0/0:38,0:38:99:0,102,1598	1/1:3,19:22:48.16:1182,48,0	0/0:40,1:41:13.28:0,13,1230	0/0:26,0:26:72.23:0,72,1169	0/0:12,0:12:21.07:0,21,349
chr10	7127650	.	A	ACCAT	22581.31	PASS	AB=0.614;AC=46;AF=0.821;AN=56;BaseQRankSum=-8.813;DP=854;FS=5.227;HRun=0;HaplotypeScore=138.6005;InbreedingCoeff=0.2000;MQ=58.02;MQ0=13;MQRankSum=7.601;QD=29.63;ReadPosRankSum=6.686;VQSLOD=4.0111;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,29:39:29.99:878,30,0	0/1:2,8:9:46.28:348,0,46	0/0:46,0:19:11.66:0,12,204	0/0:46,0:24:14.98:0,15,167	1/1:10,17:28:20.87:774,21,0	1/1:8,10:18:15.05:293,15,0	0/1:14,17:29:55.34:182,0,55	1/1:21,0:19:14.87:186,15,0	1/1:6,28:35:48.16:1095,48,0	0/1:13,26:39:14.85:1543,0,15	1/1:5,16:20:26.37:563,26,0	1/1:9,32:41:63.22:1535,63,0	1/1:3,26:29:42.14:996,42,0	1/1:2,20:23:42.14:1026,42,0	1/1:6,28:33:51.17:1202,51,0	1/1:6,19:25:51.07:1174,51,0	0/1:15,22:38:78.81:544,0,79	0/1:13,12:24:57.41:424,0,57	1/1:9,13:21:32.44:873,32,0	1/1:8,22:32:2.88:1001,3,0	1/1:39,17:55:1.92:1407,2,0	1/1:4,25:31:42.06:894,42,0	1/1:16,10:27:10.25:1250,10,0	0/1:8,19:26:44.29:416,0,44	1/1:11,22:34:48.16:961,48,0	1/1:4,25:30:72.17:1458,72,0	1/1:10,19:28:42.14:968,42,0	1/1:1,11:12:24.08:592,24,0
chr10	7127702	.	ACCAT	A	6294.70	PASS	AB=0.885;AC=27;AF=0.482;AN=56;BaseQRankSum=-2.272;DP=913;FS=0.816;HRun=0;HaplotypeScore=251.3564;InbreedingCoeff=0.5008;MQ=41.69;MQ0=35;MQRankSum=-1.003;QD=13.28;ReadPosRankSum=-1.040;VQSLOD=3.9231;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:36:63.63:0,64,1111	0/1:8,2:9:2.64:94,0,3	0/0:68,0:14:12.69:0,13,217	0/0:66,0:19:32.84:0,33,431	1/1:18,8:24:18.22:287,18,0	1/1:12,4:15:30.04:352,30,0	1/1:20,3:21:17.81:196,18,0	0/1:33,13:39:99:598,0,228	1/1:33,5:37:59:677,59,0	1/1:25,2:26:36.90:571,37,0	1/1:15,2:17:10.42:109,10,0	0/0:44,0:44:40.68:0,41,614	0/0:41,0:39:4.37:0,4,559	0/0:29,0:29:29.98:0,30,345	0/1:33,6:37:19.05:377,0,19	1/1:27,4:31:56.94:611,57,0	1/1:36,3:38:22.14:419,22,0	0/1:16,2:18:22.96:145,0,23	0/1:27,5:25:40.57:499,0,41	1/1:18,7:24:26.92:265,27,0	0/1:52,3:52:43.39:514,0,43	0/0:29,0:29:28.18:0,28,311	0/0:22,0:21:35.99:0,36,458	0/0:29,0:29:35.14:0,35,421	1/1:12,6:18:42.07:569,42,0	0/0:41,0:40:69.22:0,69,1137	0/0:30,0:27:48.03:0,48,762	0/1:13,0:13:10.03:10,0,185
chr10	7127842	.	ACCAT	A	3572.06	PASS	AB=0.644;AC=32;AF=0.593;AN=54;BaseQRankSum=-4.551;DP=781;FS=2.046;HRun=0;HaplotypeScore=172.7555;InbreedingCoeff=0.6209;MQ=54.04;MQ0=29;MQRankSum=1.367;QD=7.94;ReadPosRankSum=-0.391;VQSLOD=3.0779;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:49:59.80:0,60,852	1/1:4,6:9:8.86:109,9,0	1/1:22,0:12:2.84:14,3,0	./.	1/1:7,7:13:12.70:181,13,0	1/1:10,9:20:12.03:170,12,0	1/1:14,14:28:3.01:46,3,0	1/1:28,0:20:8.94:76,9,0	1/1:16,16:31:5.85:95,6,0	1/1:9,14:22:41.80:518,42,0	1/1:4,8:12:8.65:106,9,0	0/0:26,0:26:16.07:0,16,196	0/0:33,0:32:3.27:0,3,47	0/0:19,0:19:21.92:0,22,324	1/1:13,24:36:9.03:142,9,0	0/1:12,16:28:14.41:88,0,14	1/1:23,6:29:45.10:659,45,0	0/1:13,15:28:14.90:260,0,15	1/1:26,4:17:9:102,9,0	1/1:9,10:19:23.98:299,24,0	1/1:45,28:70:28.54:364,29,0	0/0:24,0:24:0.71:0,1,128	0/0:33,0:33:3.93:0,4,106	0/0:39,0:39:20.97:0,21,317	1/1:6,11:17:4.25:345,4,0	0/0:25,0:24:13.97:0,14,444	0/0:35,0:33:13.73:0,14,179	0/0:16,0:16:15.05:0,15,257
chr10	7127878	.	T	TCCAC	4068.41	PASS	AB=0.548;AC=17;AF=0.304;AN=56;BaseQRankSum=-0.016;DP=803;FS=0.886;HRun=0;HaplotypeScore=152.8798;InbreedingCoeff=0.7540;MQ=56.04;MQ0=25;MQRankSum=0.126;QD=13.12;ReadPosRankSum=2.306;VQSLOD=3.0717;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:44,3:46:71.52:1364,72,0	0/0:12,0:11:20.93:0,21,175	0/0:25,0:11:30.05:0,30,312	0/0:24,0:11:20.12:0,20,235	0/0:20,0:19:39.11:0,39,331	0/0:13,0:13:21.02:0,21,219	0/0:34,0:33:56.62:0,57,449	0/0:33,0:22:59.50:0,59,458	0/0:35,0:32:37.65:0,38,305	0/0:29,0:27:65.62:0,66,490	0/0:18,0:17:33.57:0,34,259	1/1:1,23:25:11.87:292,12,0	0/1:5,30:36:12.14:70,0,12	1/1:21,0:21:48.31:532,48,0	0/0:37,0:36:41:0,41,333	0/0:31,0:31:41.58:0,42,373	0/0:37,0:37:99:0,108,928	0/0:28,0:27:45.35:0,45,428	0/0:14,0:12:21.47:0,21,153	0/0:24,0:23:53.30:0,53,428	0/0:62,0:57:84.94:0,85,699	0/1:6,22:29:2.69:122,0,3	1/1:2,30:34:10.12:176,10,0	0/1:7,27:39:12:380,0,12	0/0:17,0:16:32.77:0,33,328	1/1:30,2:31:35.71:664,36,0	1/1:1,28:28:9.69:235,10,0	1/1:4,9:14:9.03:233,9,0
chr10	7128292	.	T	TG	16058.93	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=-18.884;DP=754;FS=2.606;HRun=1;HaplotypeScore=68.5056;InbreedingCoeff=0.9994;MQ=88.38;MQ0=0;MQRankSum=-3.757;QD=40.35;ReadPosRankSum=1.966;VQSLOD=5.6390;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,138,1791	1/1:0,8:8:21.07:315,21,0	0/0:28,0:28:84.18:0,84,973	0/0:27,0:26:77:0,77,936	1/1:3,23:26:66.22:978,66,0	1/1:0,14:14:33.11:494,33,0	1/1:1,19:20:57.19:854,57,0	1/1:3,25:27:78.21:1087,78,0	1/1:1,29:30:84.28:1254,84,0	1/1:0,34:34:96.30:1417,96,0	1/1:0,19:19:57.19:840,57,0	0/0:26,0:26:75.24:0,75,972	0/0:28,0:28:84.20:0,84,1019	0/0:18,0:18:54.16:0,54,686	1/1:0,32:32:90.30:1349,90,0	1/1:0,28:28:72.24:1079,72,0	1/1:0,25:25:66.22:989,66,0	1/1:0,15:15:42.14:629,42,0	1/1:2,25:27:75.23:1081,75,0	1/1:0,24:24:72.18:1042,72,0	1/1:2,42:44:99:1618,108,0	0/0:37,0:37:99:0,111,1400	0/0:24,0:24:72.22:0,72,920	0/0:27,0:27:78.25:0,78,1012	1/1:0,24:24:69.23:1034,69,0	0/0:38,1:39:69.40:0,69,1385	0/0:42,0:41:99:0,126,1620	0/0:14,0:14:42.13:0,42,532
chr10	7131661	.	TG	T	5193.72	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=8.600;DP=535;FS=10.164;HRun=2;HaplotypeScore=120.4283;InbreedingCoeff=0.9856;MQ=69.92;MQ0=3;MQRankSum=-1.587;QD=17.37;ReadPosRankSum=1.870;VQSLOD=4.0540;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,1:36:52.80:0,53,604	1/1:4,2:6:12.75:113,13,0	0/0:24,0:18:46.22:0,46,573	0/0:17,0:14:9.39:0,9,284	1/1:21,1:22:15.91:174,16,0	1/1:4,12:16:43.50:394,44,0	1/1:0,18:18:32.95:293,33,0	1/1:25,3:28:53.03:399,53,0	1/1:8,10:18:53.91:460,54,0	1/1:17,0:16:25.85:222,26,0	1/1:14,1:15:25.55:234,26,0	0/0:15,0:15:36.12:0,36,512	0/0:14,0:14:29.30:0,29,383	0/0:16,0:16:33.10:0,33,472	1/1:20,1:21:29.09:218,29,0	1/1:5,14:19:56.88:481,57,0	1/1:9,9:18:50.80:446,51,0	1/1:22,0:21:35.09:222,35,0	1/1:13,12:25:68.07:552,68,0	1/1:5,9:15:34.72:288,35,0	1/1:24,0:24:52.31:382,52,0	0/0:12,0:12:33.07:0,33,424	0/0:23,0:23:63.09:0,63,831	0/0:31,0:29:81.21:0,81,1150	1/1:6,7:15:37.38:318,37,0	0/0:24,0:24:72.23:0,72,1035	0/0:15,0:15:33.11:0,33,469	0/0:8,0:8:21.05:0,21,292
chr10	7131662	.	GGT	G	5321.81	PASS	AB=0.955;AC=24;AF=0.429;AN=56;BaseQRankSum=5.367;DP=547;FS=13.564;HRun=0;HaplotypeScore=129.1980;InbreedingCoeff=0.4340;MQ=68.82;MQ0=3;MQRankSum=-2.006;QD=17.28;ReadPosRankSum=2.059;VQSLOD=4.5234;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:58.82:0,59,555	0/1:6,0:6:7.27:36,0,7	0/0:27,0:19:46.73:0,47,770	0/0:16,0:12:9.87:0,10,385	0/1:20,0:22:72.58:73,0,73	1/1:16,0:16:44.13:588,44,0	1/1:18,0:18:33.02:399,33,0	0/1:24,0:27:10.45:194,0,10	1/1:18,0:18:54.03:624,54,0	0/1:16,0:17:24.24:87,0,24	0/1:16,0:16:10.07:102,0,10	0/0:17,0:17:39.07:0,39,571	0/0:14,0:14:33.08:0,33,480	0/0:16,0:16:32.97:0,33,523	0/1:21,0:21:62.49:64,0,62	1/1:19,0:19:57.05:691,57,0	1/1:20,0:20:53.88:619,54,0	0/1:21,0:22:26.34:106,0,26	1/1:14,10:24:65.54:723,66,0	1/1:15,0:15:15.20:390,15,0	0/1:28,0:28:64.65:183,0,65	0/0:12,0:12:36.10:0,36,546	0/0:23,0:23:62.67:0,63,1025	0/0:31,0:29:81.22:0,81,1353	1/1:17,0:17:40.31:443,40,0	0/0:24,0:24:72.22:0,72,1114	0/0:15,0:15:33.08:0,33,497	0/0:8,0:8:24.08:0,24,399
chr10	7131664	.	TTTA	T	4945.03	PASS	AB=1.000;AC=26;AF=0.464;AN=56;BaseQRankSum=2.178;DP=561;FS=6.674;HRun=0;HaplotypeScore=144.6984;InbreedingCoeff=0.4148;MQ=67.66;MQ0=3;MQRankSum=-1.779;QD=13.93;ReadPosRankSum=0.051;VQSLOD=4.2462;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:28,10:38:99:1138,99,0	0/1:6,0:6:13.25:13,0,29	0/0:27,0:19:31.55:0,32,322	0/0:16,0:12:14.45:0,14,169	0/1:22,0:22:36.04:36,0,151	1/1:16,0:16:45:428,45,0	1/1:18,0:18:32.93:312,33,0	0/1:27,0:27:96.68:117,0,97	1/1:17,0:17:49.73:423,50,0	0/1:21,0:20:49.16:91,0,49	0/1:18,0:18:67.07:94,0,67	0/0:19,0:19:17.24:0,17,146	0/0:15,0:15:24.84:0,25,152	0/0:17,0:17:31.50:0,31,179	0/1:22,0:22:47.68:48,0,150	1/1:18,0:18:53.44:451,53,0	1/1:21,0:21:53.89:440,54,0	0/1:25,0:24:70.38:70,0,96	1/1:25,0:25:64.52:597,65,0	1/1:17,0:17:9.22:246,9,0	0/1:27,0:27:95.58:96,0,117	0/0:12,0:11:21.83:0,22,142	0/0:21,0:21:28.65:0,29,226	0/0:31,0:29:53.85:0,54,381	1/1:17,0:17:42.61:343,43,0	0/0:24,0:24:18.84:0,19,274	0/0:15,0:15:29.36:0,29,156	0/0:9,0:8:20.97:0,21,108
chr10	7131665	.	TTA	T	7105.22	PASS	AB=1.000;AC=39;AF=0.696;AN=56;BaseQRankSum=1.370;DP=557;FS=36.294;HRun=0;HaplotypeScore=126.3402;InbreedingCoeff=0.2000;MQ=67.33;MQ0=4;MQRankSum=-1.239;QD=14.68;ReadPosRankSum=2.462;VQSLOD=3.0890;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:40,2:42:99:1071,115,0	1/1:6,0:6:2.46:49,2,0	0/0:27,0:18:29.55:0,30,305	0/0:15,0:11:15.23:0,15,152	0/1:23,0:23:15.40:97,0,15	1/1:16,0:16:45.09:605,45,0	1/1:16,1:17:33.07:421,33,0	1/1:27,0:27:8.54:226,9,0	1/1:17,0:17:51:617,51,0	1/1:19,0:18:10.87:151,11,0	1/1:17,0:18:10.99:176,11,0	0/1:19,0:19:30.40:30,0,71	0/1:16,0:16:24.69:25,0,69	0/1:17,0:17:17.63:18,0,82	0/1:20,0:20:21.15:98,0,21	1/1:18,0:18:54.06:690,54,0	1/1:22,0:22:62.66:700,63,0	1/1:24,0:23:19.14:168,19,0	1/1:23,2:25:69.67:738,70,0	1/1:16,1:17:23.58:405,24,0	1/1:26,0:26:7.60:228,8,0	0/0:12,0:11:4.67:0,5,79	0/0:19,0:19:21.21:0,21,169	0/1:30,0:28:42.21:42,0,199	1/1:16,1:17:44.91:488,45,0	0/1:24,0:24:39.95:40,0,100	0/1:15,0:15:18:18,0,66	0/1:9,0:8:3.68:4,0,20
chr10	7131666	.	TA	T	7274.51	PASS	AB=0.941;AC=35;AF=0.625;AN=56;BaseQRankSum=7.591;DP=558;FS=35.425;HRun=1;HaplotypeScore=119.3796;InbreedingCoeff=0.9155;MQ=65.66;MQ0=4;MQRankSum=-3.037;QD=19.50;ReadPosRankSum=-1.500;VQSLOD=2.7205;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:45,2:47:99:1007,118,0	1/1:6,0:6:16.55:132,17,0	0/0:24,2:17:25.04:0,25,283	0/0:14,0:10:6.90:0,7,120	1/1:23,0:23:51.77:296,52,0	1/1:3,12:15:45.04:449,45,0	1/1:9,8:17:33.04:333,33,0	1/1:27,0:27:61.79:435,62,0	1/1:7,10:17:51.05:492,51,0	1/1:19,0:18:42.30:285,42,0	1/1:18,0:18:43.96:336,44,0	0/0:19,0:19:26.28:0,26,152	0/1:15,1:16:8.34:8,0,105	0/0:18,0:18:17.20:0,17,151	1/1:20,0:20:42.93:259,43,0	1/1:4,14:18:54.01:517,54,0	1/1:11,11:22:62.59:591,63,0	1/1:23,0:22:56.15:344,56,0	1/1:14,10:24:69.79:595,70,0	1/1:10,8:18:44.24:382,44,0	1/1:26,0:26:67.48:429,67,0	0/0:11,0:10:22.82:0,23,140	0/0:19,0:19:47.89:0,48,275	0/0:29,0:27:37.38:0,37,329	1/1:10,7:17:44.85:386,45,0	0/0:25,0:25:45.35:0,45,292	0/0:15,0:15:23.40:0,23,124	0/0:9,0:8:20.08:0,20,85
chr10	7131667	.	ATT	A	3138.91	PASS	AB=1.000;AC=33;AF=0.589;AN=56;BaseQRankSum=-1.858;DP=566;FS=8.694;HRun=15;HaplotypeScore=141.4444;InbreedingCoeff=0.6697;MQ=65.20;MQ0=4;MQRankSum=2.646;QD=8.74;ReadPosRankSum=8.237;VQSLOD=0.3693;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:49,0:49:99:105,0,154	0/0:6,0:6:15.64:0,16,134	0/0:26,0:17:5.23:0,5,59	0/0:13,0:10:11.71:0,12,77	0/0:23,0:23:53.28:0,53,469	1/1:15,0:15:38.14:237,38,0	1/1:18,0:18:4.12:122,4,0	0/0:29,0:29:55.72:0,56,435	1/1:16,0:16:22.66:192,23,0	0/0:19,0:18:36.21:0,36,271	0/0:19,0:19:40.71:0,41,322	1/1:6,13:20:23.57:196,24,0	1/1:6,10:16:7.91:122,8,0	1/1:5,13:18:15.73:177,16,0	0/0:21,0:21:43.78:0,44,441	1/1:18,0:18:37.39:258,37,0	1/1:22,0:22:6.19:166,6,0	0/0:23,0:22:46.11:0,46,401	0/1:26,0:26:20.99:173,0,21	0/1:18,0:18:68.58:123,0,69	0/0:27,0:27:53.20:0,53,477	1/1:4,7:10:11.88:106,12,0	1/1:7,9:18:21.31:207,21,0	1/1:11,15:26:31.47:318,31,0	1/1:17,0:17:5.47:122,5,0	1/1:5,17:25:46.94:434,47,0	1/1:5,9:15:11.85:150,12,0	1/1:1,6:8:5.72:141,6,0
chr10	7131677	.	T	TC	3180.57	PASS	AB=0.962;AC=25;AF=0.446;AN=56;BaseQRankSum=4.457;DP=551;FS=75.099;HRun=0;HaplotypeScore=129.9203;InbreedingCoeff=0.4305;MQ=68.58;MQ0=4;MQRankSum=-0.846;QD=10.13;ReadPosRankSum=1.168;VQSLOD=0.6101;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,112,808	0/1:6,0:6:29.68:30,0,38	0/0:33,0:21:18.02:0,18,241	0/0:16,0:10:10.13:0,10,91	1/1:21,2:23:8.72:252,9,0	1/1:16,0:16:42.45:248,42,0	1/1:16,0:16:39.22:227,39,0	0/1:30,1:31:26.49:298,0,26	1/1:18,0:18:10.96:224,11,0	0/1:17,1:17:41.64:180,0,42	0/1:15,0:15:27.57:105,0,28	0/0:17,0:17:32.65:0,33,223	0/0:12,0:12:20.82:0,21,148	0/0:15,0:15:26.76:0,27,189	0/1:21,0:21:61.70:144,0,62	1/1:19,0:19:23.19:224,23,0	1/1:25,0:25:0.01:299,0,0	0/1:17,5:21:28.20:259,0,28	1/1:24,0:24:46.34:314,46,0	1/1:11,7:18:36.42:205,36,0	0/1:25,0:25:99:201,0,123	0/0:10,0:9:23.80:0,24,173	0/0:17,0:17:47.08:0,47,328	0/0:25,0:23:62.54:0,63,465	1/1:17,0:17:15.57:171,16,0	0/0:25,0:25:73.99:0,74,509	0/0:11,0:11:23.75:0,24,160	0/0:12,0:11:32.52:0,33,221
chr10	7131824	.	TTTTTTTTTTTTTTTTTTTTTGGTTC	T	6274.61	PASS	AB=0.976;AC=16;AF=0.296;AN=54;BaseQRankSum=12.401;DP=408;FS=17.448;HRun=0;HaplotypeScore=244.1270;InbreedingCoeff=-0.2994;MQ=56.05;MQ0=17;MQRankSum=-4.360;QD=26.48;ReadPosRankSum=8.417;VQSLOD=1.7569;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:29:66.23:0,66,4060	0/0:1,0:1:0:0,0,0	0/0:16,0:8:18.06:0,18,852	0/0:12,0:8:18:0,18,382	0/1:11,0:10:90.40:90,0,94	0/1:14,0:14:99:667,0,138	0/1:11,0:10:99:289,0,121	0/1:17,0:17:99:200,0,215	0/1:15,0:14:99:598,0,271	0/1:17,0:17:99:522,0,292	0/1:10,0:10:24.22:394,0,24	0/0:10,0:10:27.09:0,27,2005	0/0:14,0:12:27.07:0,27,1665	0/0:10,0:9:18.06:0,18,1192	0/1:22,0:22:99:767,0,201	0/1:11,0:10:99:389,0,132	0/1:25,0:25:99:487,0,453	0/1:16,0:14:99:164,0,204	0/1:16,0:14:69.01:69,0,404	0/1:5,5:9:99:270,0,104	0/1:24,0:23:99:576,0,266	0/0:6,0:6:10.26:0,10,368	0/0:11,0:11:21.06:0,21,1299	0/0:9,0:9:14.14:0,14,277	1/1:18,0:18:0.40:793,0,0	0/0:25,0:25:69.24:0,69,4961	0/0:24,0:23:63.20:0,63,4177	./.
chr10	7131826	.	TTTTTTTTTTTTTTTTTTTGGTTC	T	8445.04	PASS	AB=0.984;AC=18;AF=0.333;AN=54;BaseQRankSum=11.752;DP=410;FS=16.636;HRun=0;HaplotypeScore=217.6000;InbreedingCoeff=-0.0510;MQ=54.16;MQ0=24;MQRankSum=-3.608;QD=35.19;ReadPosRankSum=8.238;VQSLOD=1.8543;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:28:66.23:0,66,3647	0/0:1,0:1:0:0,0,0	0/0:15,0:7:18.06:0,18,793	0/0:12,0:8:14.88:0,15,285	1/1:12,0:11:2.55:131,3,0	0/1:15,0:15:31.34:870,0,31	0/1:10,0:9:24.99:378,0,25	0/1:18,0:17:47.40:431,0,47	0/1:16,1:16:56.93:794,0,57	0/1:16,1:17:67.35:710,0,67	1/1:9,0:9:11.76:524,12,0	0/0:10,0:10:27.08:0,27,1814	0/0:14,0:12:24.08:0,24,1428	0/0:10,0:9:18.06:0,18,1089	0/1:21,0:21:10.43:1011,0,10	0/1:11,0:10:24.05:506,0,24	0/1:26,1:24:99:660,0,107	0/1:17,0:14:99:230,0,117	0/1:16,0:14:95.81:117,0,96	0/1:10,0:9:12.85:273,0,13	0/1:22,1:22:56.78:772,0,57	0/0:6,0:6:6.91:0,7,311	0/0:10,0:10:18.06:0,18,1136	0/0:9,0:9:13.66:0,14,205	1/1:17,0:17:15.47:1037,15,0	0/0:25,0:25:66.23:0,66,4521	0/0:26,0:23:60.21:0,60,3797	./.
chr10	7131827	.	TTTTTTTTTTTTTTTTTTGGTTC	T	10516.66	PASS	AB=0.796;AC=27;AF=0.500;AN=54;BaseQRankSum=10.026;DP=411;FS=7.715;HRun=0;HaplotypeScore=202.8477;InbreedingCoeff=0.6481;MQ=53.93;MQ0=27;MQRankSum=-3.316;QD=43.82;ReadPosRankSum=8.420;VQSLOD=1.8019;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:28:66.23:0,66,3403	0/0:1,0:1:0:0,0,0	0/0:15,0:7:18.06:0,18,745	0/0:12,0:8:14.99:0,15,285	1/1:5,7:11:2.60:161,3,0	1/1:6,9:15:4.01:1074,4,0	1/1:7,3:9:8.35:484,8,0	1/1:5,13:17:28.70:714,29,0	1/1:9,8:16:17.13:951,17,0	1/1:10,6:16:16.97:840,17,0	1/1:3,6:9:11.79:646,12,0	0/0:10,0:10:24.08:0,24,1736	0/0:14,0:12:23.84:0,24,1329	0/0:10,0:9:18.06:0,18,1040	1/1:7,13:20:6.92:1262,7,0	1/1:5,6:10:11.51:645,12,0	0/1:17,12:24:3.66:773,0,4	0/1:11,6:14:86.18:278,0,86	0/1:15,1:14:17.83:189,0,18	1/1:9,1:9:5.65:306,6,0	1/1:13,10:22:14.21:911,14,0	0/0:6,0:6:6.91:0,7,308	0/0:10,0:10:18.04:0,18,1041	0/0:10,0:9:9.14:0,9,170	1/1:3,14:17:18.16:1284,18,0	0/0:25,0:25:66.23:0,66,4324	0/0:26,0:23:60.21:0,60,3669	./.
chr10	7131828	.	TTTTTTTTTTTTTTTTTGGTTC	T	9259.14	PASS	AB=0.971;AC=28;AF=0.519;AN=54;BaseQRankSum=10.912;DP=405;FS=6.613;HRun=0;HaplotypeScore=194.6968;InbreedingCoeff=0.7326;MQ=53.54;MQ0=32;MQRankSum=-4.998;QD=39.40;ReadPosRankSum=8.264;VQSLOD=2.5503;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:28:69.24:0,69,3300	0/0:1,0:1:0:0,0,0	0/0:15,0:7:18.04:0,18,667	0/0:12,0:8:12.03:0,12,230	1/1:12,0:11:2.63:139,3,0	1/1:13,1:14:20.60:992,21,0	1/1:10,0:9:8.43:418,8,0	1/1:17,0:16:28.89:539,29,0	1/1:17,0:16:17.27:836,17,0	1/1:15,0:14:17.25:747,17,0	1/1:9,0:8:11.87:558,12,0	0/0:10,0:10:24.08:0,24,1659	0/0:14,0:12:20.86:0,21,1222	0/0:8,0:7:18.06:0,18,999	1/1:21,0:20:23.44:1108,23,0	1/1:11,0:10:11.58:558,12,0	1/1:29,1:24:13.88:697,14,0	0/1:15,1:13:74.87:285,0,75	0/1:15,0:13:9.69:145,0,10	1/1:11,0:9:5.70:278,6,0	1/1:20,1:20:14.92:847,15,0	0/0:6,0:6:6.91:0,7,280	0/0:10,0:10:15.05:0,15,949	0/0:11,0:10:9.14:0,9,154	1/1:16,0:16:19.66:1111,20,0	0/0:25,0:25:66.23:0,66,4068	0/0:26,0:23:60.21:0,60,3469	./.
chr10	7133576	.	G	GGT	4973.71	PASS	AB=0.846;AC=46;AF=0.885;AN=52;BaseQRankSum=-1.485;DP=796;FS=0.000;HRun=0;HaplotypeScore=191.2457;InbreedingCoeff=-0.0123;MQ=66.97;MQ0=32;MQRankSum=-0.808;QD=6.97;ReadPosRankSum=0.384;VQSLOD=4.4262;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:23:5.44:19,5,0	1/1:19,0:16:13.91:85,14,0	0/1:42,0:27:0.99:1,0,9	./.	1/1:25,0:24:2.97:24,3,0	1/1:19,0:20:15.88:77,16,0	1/1:28,0:29:27.35:131,27,0	1/1:34,0:32:16.56:105,17,0	1/1:32,0:33:18.84:113,19,0	1/1:31,0:28:23.41:218,23,0	1/1:17,0:11:2.37:8,2,0	0/1:23,3:28:52.47:276,0,52	0/1:21,3:24:32.75:251,0,33	1/1:27,7:34:42.07:543,42,0	1/1:43,0:37:11.84:63,12,0	1/1:32,0:38:19.82:214,20,0	1/1:19,0:19:11.46:76,11,0	1/1:10,0:7:12.19:50,12,0	1/1:20,0:19:14.27:99,14,0	1/1:20,0:21:5.47:49,5,0	./.	0/1:17,7:25:1.53:271,0,2	1/1:8,5:14:8.05:216,8,0	1/1:22,14:36:46.01:810,46,0	1/1:24,0:20:8.51:81,9,0	0/1:25,10:38:0.05:290,0,0	0/1:21,5:26:63.92:406,0,64	1/1:8,13:23:5.19:499,5,0
chr10	7133606	.	TATG	T	2363.07	PASS	AB=0.939;AC=23;AF=0.411;AN=56;BaseQRankSum=2.360;DP=860;FS=45.220;HRun=0;HaplotypeScore=212.3769;InbreedingCoeff=-0.1680;MQ=39.56;MQ0=66;MQRankSum=-2.417;QD=5.00;ReadPosRankSum=-4.164;VQSLOD=0.2421;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:22,4:21:99:117,0,503	1/1:19,1:17:13.04:94,13,0	0/0:79,1:12:26.27:0,26,578	0/0:82,1:10:27.02:0,27,500	0/1:9,4:12:18.34:18,0,56	0/1:17,0:15:21.77:185,0,22	0/1:35,2:34:85.39:282,0,85	0/0:51,1:42:18.99:0,19,2058	1/1:21,3:22:10.50:260,11,0	0/1:25,4:22:99:332,0,504	1/1:14,1:9:3.20:24,3,0	0/0:31,0:31:12.62:0,13,1244	0/1:24,0:24:51.92:52,0,706	0/1:26,0:25:50.36:50,0,807	0/1:36,4:32:4.26:50,0,4	0/1:33,1:33:18.22:506,0,18	0/1:16,1:16:99:110,0,126	0/1:13,0:10:89.85:90,0,101	0/1:19,1:18:99:140,0,481	1/1:22,1:22:1.39:65,1,0	0/1:46,1:35:16.39:16,0,69	0/0:25,0:25:32.71:0,33,924	0/1:17,0:16:30.03:30,0,305	0/0:42,0:40:52.43:0,52,1505	0/1:28,1:24:53.79:112,0,54	0/0:27,0:27:8.34:0,8,1364	0/0:27,0:26:28.32:0,28,1075	0/0:19,0:19:51.15:0,51,844
chr10	7133616	.	GTGTA	G	628.31	PASS	AB=0.976;AC=15;AF=0.268;AN=56;BaseQRankSum=10.127;DP=868;FS=0.541;HRun=0;HaplotypeScore=229.9965;InbreedingCoeff=0.1602;MQ=39.95;MQ0=60;MQRankSum=-7.856;QD=2.17;ReadPosRankSum=-5.532;VQSLOD=0.3909;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:31:30.20:0,30,648	0/1:19,0:17:6.40:6,0,53	0/0:77,0:10:27.09:0,27,669	0/0:86,0:9:27.05:0,27,659	0/0:16,0:15:2.90:0,3,82	1/1:12,1:13:16.28:163,16,0	0/1:36,1:36:70.28:130,0,70	0/0:67,0:58:86.99:0,87,2261	1/1:23,0:23:12.33:60,12,0	0/1:25,0:18:31.29:31,0,613	0/0:17,0:13:2.65:0,3,24	0/0:36,0:35:78.93:0,79,1717	0/0:19,0:19:40.96:0,41,992	0/0:22,0:21:56.94:0,57,1158	0/1:45,0:40:12.38:12,0,31	0/1:28,1:28:50.47:200,0,50	0/1:16,2:18:75.71:76,0,94	0/1:13,1:12:57.04:57,0,190	0/1:23,0:20:4.31:4,0,376	1/1:20,0:20:5.96:48,6,0	0/0:55,0:45:10.71:0,11,188	0/0:25,0:25:57.03:0,57,1391	0/0:13,0:12:18.06:0,18,466	0/0:37,0:35:80.85:0,81,1910	0/1:21,0:20:0.36:0,0,11	0/0:27,0:27:78.27:0,78,1956	0/0:25,0:23:62.49:0,62,1349	0/0:19,0:19:51.17:0,51,1332
chr10	7133620	.	AGTGTGTGTGTGT	A	4446.35	PASS	AB=0.733;AC=24;AF=0.429;AN=56;BaseQRankSum=4.249;DP=867;FS=11.201;HRun=0;HaplotypeScore=275.6290;InbreedingCoeff=0.4419;MQ=41.17;MQ0=48;MQRankSum=-4.586;QD=10.15;ReadPosRankSum=-5.701;VQSLOD=1.3541;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:30:35.76:0,36,1060	1/1:11,7:17:12.29:324,12,0	0/0:76,0:9:9.03:0,9,199	0/0:87,0:9:15.05:0,15,363	0/1:11,6:15:0:0,0,0	1/1:6,0:12:10.98:71,11,0	1/1:15,0:39:23.16:266,23,0	0/1:40,32:63:99:1799,0,159	1/1:7,1:23:11.38:106,11,0	0/1:18,3:16:99:556,0,107	0/1:7,7:13:0.41:1,0,0	0/0:22,0:38:63.22:0,63,2641	0/0:17,0:22:48.10:0,48,1741	0/0:19,0:23:48.16:0,48,1912	1/1:19,20:39:10.12:320,10,0	0/1:16,0:26:6.32:137,0,6	0/1:12,0:18:15.41:120,0,15	0/1:8,7:13:29.94:290,0,30	0/1:14,0:18:99:142,0,136	1/1:6,0:20:3.18:76,3,0	1/1:27,27:46:3.45:67,3,0	0/0:20,0:26:48.16:0,48,1907	0/0:7,0:14:12.03:0,12,415	0/0:21,0:35:53.78:0,54,2378	1/1:7,0:20:27.77:171,28,0	0/0:24,0:25:63.22:0,63,2169	0/0:23,0:25:57.20:0,57,2287	0/0:19,0:19:36.10:0,36,1290
chr10	7133630	.	T	TA	1799.12	PASS	AB=0.981;AC=20;AF=0.357;AN=56;BaseQRankSum=10.037;DP=826;FS=7.936;HRun=0;HaplotypeScore=189.6892;InbreedingCoeff=0.3654;MQ=42.32;MQ0=46;MQRankSum=-6.523;QD=5.52;ReadPosRankSum=-4.407;VQSLOD=1.6055;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,1:34:52.56:0,53,421	1/1:16,0:14:12.25:74,12,0	0/0:71,0:10:26.88:0,27,344	0/0:85,0:11:30.10:0,30,407	0/0:14,1:13:2.75:0,3,23	0/1:11,1:12:25.48:106,0,25	0/1:34,1:35:56.47:273,0,56	0/1:60,0:52:48.14:48,0,927	1/1:22,0:22:17.13:219,17,0	0/1:21,0:16:42.10:42,0,248	0/1:11,0:10:0.81:1,0,1	0/0:39,0:38:81.05:0,81,892	0/0:25,0:25:60.03:0,60,697	0/0:26,0:26:69.05:0,69,799	1/1:36,1:35:9.82:110,10,0	0/1:20,1:20:23.38:216,0,23	1/1:17,2:18:3.03:140,3,0	0/1:13,0:11:3.03:3,0,99	0/1:20,0:17:99:226,0,121	1/1:19,0:20:12.72:141,13,0	0/0:52,0:45:9.98:0,10,103	0/0:28,0:28:62.94:0,63,736	0/0:12,0:11:12.01:0,12,131	0/0:37,0:35:71.83:0,72,812	1/1:18,1:18:29.71:382,30,0	0/0:26,0:25:72.15:0,72,973	0/0:27,0:25:68.74:0,69,847	0/0:22,0:22:60.20:0,60,832
chr10	7133632	.	T	TA	1357.06	PASS	AB=0.963;AC=13;AF=0.232;AN=56;BaseQRankSum=6.198;DP=826;FS=0.000;HRun=0;HaplotypeScore=193.5380;InbreedingCoeff=0.3028;MQ=42.61;MQ0=50;MQRankSum=-3.553;QD=5.08;ReadPosRankSum=-3.548;VQSLOD=2.8040;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:36:55.26:0,55,459	1/1:13,2:14:15.19:202,15,0	0/0:71,0:11:26.74:0,27,354	0/0:81,0:12:33.11:0,33,441	1/1:10,4:12:0.36:1,0,0	0/0:13,0:13:17.34:0,17,118	0/0:39,0:39:15.57:0,16,154	0/1:56,0:48:99:726,0,543	0/1:24,0:24:14.63:26,0,15	0/1:18,5:19:99:258,0,218	0/1:10,1:10:0.81:1,0,1	0/0:39,0:38:81.03:0,81,876	0/0:25,0:25:60.01:0,60,713	0/0:25,0:25:69.10:0,69,823	1/1:31,5:34:18.27:207,18,0	0/0:20,0:19:4.19:0,4,45	0/0:19,0:18:7.09:0,7,25	0/1:13,0:12:17.48:17,0,52	0/0:18,0:15:18.26:0,18,191	0/1:20,0:20:2.83:43,0,3	0/1:54,0:46:27.47:27,0,71	0/0:28,0:28:62.91:0,63,748	0/0:13,0:12:15:0,15,154	0/0:36,0:34:65.82:0,66,733	0/0:19,0:18:12.19:0,12,80	0/0:27,0:26:75.15:0,75,986	0/0:26,0:24:65.79:0,66,825	0/0:22,0:22:60.20:0,60,832
chr10	7133776	.	GTGTATGTATATATGGTGTGTA	G	5941.46	PASS	AB=0.854;AC=31;AF=0.554;AN=56;BaseQRankSum=3.635;DP=967;FS=0.960;HRun=0;HaplotypeScore=464.8153;InbreedingCoeff=0.7170;MQ=53.70;MQ0=8;MQRankSum=-3.580;QD=11.47;ReadPosRankSum=0.894;VQSLOD=1.7182;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:60,0:60:87.75:0,88,5982	1/1:3,0:3:2.92:17,3,0	0/0:56,0:31:31.61:0,32,585	0/0:64,0:41:49.51:0,50,900	0/1:7,18:25:0:0,0,0	1/1:11,0:11:4.26:121,4,0	1/1:24,0:24:17.97:287,18,0	0/1:52,0:51:21.28:192,0,21	1/1:11,15:26:12.04:629,12,0	1/1:20,25:45:45.51:1099,46,0	1/1:13,15:27:2.84:18,3,0	0/0:34,0:34:51.13:0,51,3136	0/0:29,0:29:71.93:0,72,4131	0/0:28,0:28:60.17:0,60,3430	1/1:21,22:44:12.04:594,12,0	1/1:19,16:35:11.83:443,12,0	1/1:7,12:19:3.01:167,3,0	1/1:24,0:24:17.79:503,18,0	1/1:22,2:22:27.08:666,27,0	1/1:13,18:31:8.84:55,9,0	1/1:54,0:54:35.95:454,36,0	0/0:45,0:45:70.07:0,70,4337	0/0:30,0:30:60.10:0,60,4049	0/0:63,0:62:99:0,120,8171	1/1:18,6:24:20.90:608,21,0	0/1:48,1:49:88.63:89,0,4048	0/0:22,0:22:45.12:0,45,2334	0/0:18,0:18:48.15:0,48,3341
chr10	7133793	.	GTGTA	G	892.90	PASS	AB=0.945;AC=15;AF=0.278;AN=54;BaseQRankSum=9.765;DP=861;FS=4.413;HRun=0;HaplotypeScore=197.7973;InbreedingCoeff=-0.1891;MQ=52.55;MQ0=5;MQRankSum=-5.310;QD=2.76;ReadPosRankSum=-3.742;VQSLOD=1.5124;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:61,0:61:99:0,138,3334	0/1:4,1:5:30.96:31,0,46	0/0:59,0:32:71.63:0,72,1389	0/0:64,2:42:98.67:0,99,2001	./.	0/1:10,0:10:37.51:38,0,134	0/1:17,5:23:99:117,0,374	0/1:33,0:32:0.71:1,0,528	1/1:18,0:18:11.85:96,12,0	0/1:34,0:34:99:210,0,386	0/0:20,0:20:8.76:0,9,103	0/0:41,0:41:90.19:0,90,2103	0/0:26,0:26:78.27:0,78,1941	0/0:28,0:28:78.22:0,78,1842	0/1:34,0:34:51.18:86,0,51	0/1:25,1:26:94.23:101,0,94	0/1:16,0:16:15.99:22,0,16	0/1:17,2:19:99:207,0,315	0/1:18,1:17:71.19:71,0,488	0/1:23,0:23:24.96:25,0,66	0/1:41,1:46:28.95:29,0,649	0/0:40,0:40:99:0,105,2494	0/0:32,0:32:84.07:0,84,2045	0/0:60,0:60:99:0,141,3458	0/1:16,1:17:15.85:16,0,157	0/0:45,0:45:92.01:0,92,2711	0/0:20,0:20:60.19:0,60,1450	0/0:17,0:17:48.16:0,48,1224
chr10	7133881	.	GGTGT	G	1666.30	PASS	AB=0.919;AC=10;AF=0.185;AN=54;BaseQRankSum=4.412;DP=987;FS=24.798;HRun=0;HaplotypeScore=174.9575;InbreedingCoeff=0.5603;MQ=49.98;MQ0=75;MQRankSum=-1.554;QD=8.17;ReadPosRankSum=0.380;VQSLOD=1.0428;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:42,26:66:6.28:550,6,0	0/0:14,0:9:3.01:0,3,38	./.	0/0:51,0:14:3.01:0,3,48	0/0:22,0:20:12.04:0,12,189	0/0:39,0:39:3.77:0,4,863	0/0:34,0:35:48.15:0,48,894	0/0:56,0:45:34.08:0,34,332	0/1:21,1:26:12.29:12,0,476	0/0:41,0:37:58.21:0,58,623	0/0:13,0:12:6.02:0,6,90	0/0:45,0:43:62.10:0,62,1332	0/0:33,0:37:64.72:0,65,1275	0/0:26,0:29:44.89:0,45,996	0/0:31,0:33:28.68:0,29,342	0/0:29,1:30:0.53:0,1,833	0/0:27,0:27:44.89:0,45,798	0/0:27,0:30:16.32:0,16,272	0/0:33,0:24:10.86:0,11,214	0/0:23,0:19:27.02:0,27,401	0/0:44,0:40:12.97:0,13,167	0/0:27,0:33:26.29:0,26,490	0/1:26,0:22:28.20:28,0,205	0/0:43,0:52:56.84:0,57,1539	0/0:25,0:28:26.70:0,27,508	1/1:30,11:40:48.14:674,48,0	1/1:18,6:23:23.26:294,23,0	1/1:8,7:13:18.05:265,18,0
chr10	7134932	.	GAGA	G	15198.99	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=16.386;DP=715;FS=1.238;HRun=0;HaplotypeScore=105.9096;InbreedingCoeff=0.9980;MQ=88.60;MQ0=4;MQRankSum=-7.699;QD=42.94;ReadPosRankSum=2.377;VQSLOD=6.2974;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:57:99:0,169,3748	1/1:1,10:11:30.10:509,30,0	0/0:29,0:29:46.75:0,47,1312	0/0:31,0:30:79.88:0,80,1772	1/1:0,12:12:36.12:612,36,0	1/1:2,22:24:63.21:1074,63,0	1/1:1,21:22:51.17:869,51,0	1/1:1,18:19:54.18:894,54,0	1/1:2,13:15:39.13:665,39,0	1/1:1,18:19:54.18:920,54,0	1/1:0,16:16:48.16:817,48,0	0/0:42,0:42:99:0,120,2682	0/0:38,0:38:99:0,111,2409	0/0:36,0:36:99:0,99,2174	1/1:0,28:28:75.26:1277,75,0	1/1:0,41:41:99:1943,114,0	1/1:2,33:35:69.24:1176,69,0	1/1:1,20:20:51.17:870,51,0	1/1:2,20:20:54.16:812,54,0	1/1:0,18:18:45.15:767,45,0	1/1:2,23:25:54.18:921,54,0	0/0:12,0:12:36.12:0,36,803	0/0:13,0:13:39.13:0,39,881	0/0:42,0:42:99:0,120,2596	1/1:2,24:24:63.22:1073,63,0	0/0:21,1:22:16.28:0,16,1373	0/0:30,0:30:87.30:0,87,1962	0/0:9,0:9:27.09:0,27,594
chr10	7135173	.	TAAATA	T	5671.58	PASS	AB=0.568;AC=17;AF=0.304;AN=56;BaseQRankSum=12.622;DP=534;FS=3.081;HRun=0;HaplotypeScore=102.7102;InbreedingCoeff=0.9054;MQ=64.76;MQ0=0;MQRankSum=-5.580;QD=32.22;ReadPosRankSum=3.747;VQSLOD=4.8709;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,101,2739	0/0:5,0:5:15.04:0,15,366	0/0:18,0:16:26.99:0,27,613	0/0:20,0:17:11.77:0,12,436	0/0:19,0:19:42.13:0,42,1067	0/0:23,0:23:63.22:0,63,1826	0/0:11,0:11:24.08:0,24,632	0/0:28,0:28:69.24:0,69,1676	0/0:10,0:10:24.08:0,24,626	0/0:16,0:15:45.15:0,45,1293	0/0:18,0:18:48.15:0,48,1330	1/1:3,17:20:27.09:523,27,0	1/1:4,20:24:45.15:848,45,0	1/1:3,19:22:36.12:700,36,0	0/0:12,0:12:30.10:0,30,823	0/0:13,0:13:27.09:0,27,754	0/0:36,0:36:90.31:0,90,2604	0/0:22,0:22:60.21:0,60,1644	0/0:21,0:21:57.18:0,57,1284	0/0:18,0:18:48.16:0,48,1312	0/0:11,0:11:30.10:0,30,775	1/1:2,8:10:21.07:360,21,0	1/1:2,18:20:26.18:526,26,0	1/1:4,15:19:24.08:471,24,0	0/0:13,0:13:33.11:0,33,956	0/1:6,19:25:28.06:962,0,28	1/1:4,18:22:39.13:753,39,0	1/1:0,14:14:27.09:529,27,0
chr10	7135687	.	TG	T	14111.61	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=20.098;DP=647;FS=7.816;HRun=1;HaplotypeScore=123.4113;InbreedingCoeff=0.9997;MQ=85.58;MQ0=0;MQRankSum=-8.427;QD=38.14;ReadPosRankSum=2.030;VQSLOD=4.0057;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,105,1664	1/1:0,12:12:33.11:461,33,0	0/0:21,0:21:62.88:0,63,902	0/0:26,0:26:45.50:0,45,949	1/1:0,22:22:60.20:838,60,0	1/1:0,23:23:66.15:900,66,0	1/1:0,24:24:63.21:880,63,0	1/1:0,30:30:84.27:1156,84,0	1/1:0,25:25:72.24:1006,72,0	1/1:0,31:31:93.31:1294,93,0	1/1:0,11:11:30.06:397,30,0	0/0:31,0:31:70.32:0,70,1347	0/0:16,0:16:48.16:0,48,763	0/0:22,0:22:66.21:0,66,1031	1/1:0,28:28:75.25:1048,75,0	1/1:0,19:19:48.16:671,48,0	1/1:0,30:30:84.28:1173,84,0	1/1:0,27:27:72.24:1004,72,0	1/1:0,21:21:63.21:880,63,0	1/1:3,10:13:30.10:418,30,0	1/1:0,38:38:99:1337,102,0	0/0:28,0:28:84.29:0,84,1343	0/0:15,0:15:45.13:0,45,673	0/0:24,0:24:72.25:0,72,1144	1/1:0,16:16:48.12:648,48,0	0/0:21,0:21:63.21:0,63,1007	0/0:27,0:27:81.28:0,81,1288	0/0:10,0:10:30.09:0,30,457
chr10	7138293	.	TCTTCCTTCCTTC	T	2297.02	PASS	AB=1.000;AC=23;AF=0.426;AN=54;BaseQRankSum=5.993;DP=620;FS=0.000;HRun=0;HaplotypeScore=268.9827;InbreedingCoeff=0.9018;MQ=53.97;MQ0=12;MQRankSum=-8.224;QD=9.49;ReadPosRankSum=-0.025;VQSLOD=2.0553;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:10,12:22:12.02:333,12,0	1/1:8,0:8:13.75:127,14,0	./.	0/0:27,0:13:3.01:0,3,56	1/1:21,0:21:37.67:325,38,0	0/0:18,0:18:26.18:0,26,417	0/0:24,0:21:25.81:0,26,319	0/1:31,0:28:0.04:0,0,0	0/0:18,0:18:35.88:0,36,522	1/1:21,0:21:24.90:159,25,0	1/1:23,0:23:26.75:339,27,0	0/0:20,0:20:41.72:0,42,758	0/0:23,0:22:40.64:0,41,622	0/0:22,0:22:48.08:0,48,791	1/1:21,0:21:47.15:345,47,0	0/0:27,0:27:47.52:0,48,837	0/0:28,0:28:50.99:0,51,807	1/1:18,0:18:23.66:155,24,0	0/0:17,0:13:15.03:0,15,210	0/0:38,0:38:66.26:0,66,1157	1/1:13,0:13:0.99:16,1,0	0/0:22,0:22:21.67:0,22,386	0/0:21,0:21:45.14:0,45,759	0/0:19,0:19:26:0,26,506	0/0:22,0:23:37.92:0,38,677	1/1:26,0:25:51.90:344,52,0	1/1:22,0:28:38.49:239,38,0	1/1:10,0:10:14.77:124,15,0
chr10	7138331	.	TTCCTTC	T	5300.34	PASS	AB=0.904;AC=26;AF=0.464;AN=56;BaseQRankSum=18.996;DP=640;FS=4.022;HRun=0;HaplotypeScore=209.3968;InbreedingCoeff=-0.6992;MQ=50.86;MQ0=5;MQRankSum=-0.806;QD=9.40;ReadPosRankSum=12.273;VQSLOD=1.7146;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:26:52.08:52,0,575	0/1:7,3:10:73.02:210,0,73	0/1:21,0:2:0.02:0,0,0	0/0:25,0:7:14.91:0,15,213	0/1:18,13:31:99:561,0,229	0/1:19,0:19:59.42:59,0,155	0/1:28,0:26:14.24:14,0,300	0/0:25,0:23:61.59:0,62,460	0/1:19,0:19:45.39:45,0,180	0/1:18,6:24:99:402,0,210	0/1:16,10:26:99:451,0,169	0/1:21,0:21:94.78:95,0,134	0/1:21,0:20:95.04:95,0,128	0/1:26,0:26:98.50:99,0,166	0/1:10,13:23:51.50:640,0,51	0/1:23,0:23:38.76:193,0,39	0/1:24,0:24:99:100,0,155	0/1:10,5:15:99:185,0,172	0/0:26,0:24:23.29:0,23,493	0/1:29,0:29:99:164,0,124	0/1:8,2:10:68.97:69,0,121	0/1:20,0:20:37.40:37,0,180	0/1:30,0:30:99:100,0,303	0/1:20,0:20:80.58:81,0,155	0/1:23,0:23:92.46:92,0,191	1/1:8,14:22:3.77:716,4,0	0/1:24,15:39:99:595,0,326	0/1:9,3:12:66.18:243,0,66
chr10	7138335	.	TTC	T	3613.08	PASS	AB=0.856;AC=24;AF=0.429;AN=56;BaseQRankSum=17.495;DP=641;FS=0.988;HRun=0;HaplotypeScore=169.5735;InbreedingCoeff=-0.6990;MQ=51.50;MQ0=2;MQRankSum=0.703;QD=6.49;ReadPosRankSum=8.679;VQSLOD=2.4639;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:36.44:0,36,645	0/1:10,0:10:69.02:69,0,98	0/1:20,0:2:0.01:0,0,0	0/0:24,0:6:12.98:0,13,177	0/1:33,0:33:99:118,0,307	0/1:15,5:20:99:141,0,129	0/1:21,8:26:89.07:89,0,298	0/0:23,0:23:60.58:0,61,458	0/1:10,7:17:99:127,0,117	0/1:24,0:24:71.75:72,0,225	0/1:25,0:25:99:122,0,194	0/1:10,11:21:98.18:210,0,98	0/1:10,9:19:92.61:203,0,93	0/1:17,7:24:99:216,0,154	0/1:25,0:25:99:162,0,140	0/1:10,13:23:36.50:344,0,37	0/1:15,11:26:99:206,0,223	0/1:15,0:15:45.36:45,0,186	0/1:22,1:22:5.64:6,0,439	0/1:13,16:29:56.81:345,0,57	0/0:10,0:10:8.52:0,9,152	0/1:17,4:21:99:112,0,168	0/1:21,10:31:99:223,0,270	0/1:18,3:21:99:200,0,144	0/1:16,10:26:99:188,0,207	0/1:22,0:22:46.92:206,0,47	0/1:39,0:39:99:161,0,315	0/1:13,0:13:47.61:48,0,70
chr10	7139988	.	T	TA	244.85	PASS	AB=0.833;AC=17;AF=0.405;AN=42;BaseQRankSum=3.955;DP=260;FS=8.772;HRun=0;HaplotypeScore=34.7401;InbreedingCoeff=0.6744;MQ=73.77;MQ0=1;MQRankSum=0.136;QD=12.89;ReadPosRankSum=-6.397;VQSLOD=1.2016;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:87.23:0,87,1162	1/1:1,0:1:2.90:16,3,0	0/0:7,0:5:15.04:0,15,184	0/0:15,0:10:20.96:0,21,194	./.	./.	./.	1/1:3,0:3:9:81,9,0	1/1:0,2:2:2.94:18,3,0	1/1:0,1:1:3:25,3,0	./.	0/0:19,0:19:57.17:0,57,764	0/0:22,0:22:60.19:0,60,821	0/0:14,0:14:42.13:0,42,570	1/1:3,0:3:8.99:75,9,0	1/1:2,0:2:6.01:55,6,0	./.	1/1:1,0:1:2.94:18,3,0	0/1:4,1:5:26.97:81,0,27	./.	./.	0/0:27,0:27:81.20:0,81,1106	0/0:23,0:23:63.21:0,63,877	0/0:22,0:22:66.22:0,66,920	1/1:1,0:1:3:28,3,0	0/0:16,0:16:48.15:0,48,652	0/0:29,0:29:84.26:0,84,1140	0/0:13,0:13:39.12:0,39,528
chr10	7140060	.	TA	T	1007.64	PASS	AB=0.834;AC=18;AF=0.750;AN=24;BaseQRankSum=-4.249;DP=253;FS=3.215;HRun=16;HaplotypeScore=72.6482;InbreedingCoeff=0.5469;MQ=60.92;MQ0=21;MQRankSum=0.869;QD=5.36;ReadPosRankSum=4.667;VQSLOD=2.6297;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:10,1:27:26.13:0,26,209	./.	0/0:31,0:9:13.38:0,13,84	0/1:28,1:7:6.73:7,0,37	./.	./.	./.	./.	./.	./.	./.	1/1:9,2:10:14.67:89,15,0	1/1:10,7:18:37.24:220,37,0	1/1:10,4:16:21.53:118,22,0	./.	./.	./.	./.	./.	./.	./.	0/1:12,7:21:0.14:95,0,0	1/1:15,11:28:28.36:148,28,0	1/1:7,9:16:29.61:167,30,0	./.	1/1:8,10:20:30.39:172,30,0	1/1:7,6:15:0.21:65,0,0	1/1:9,2:10:5.71:36,6,0
chr10	7140247	.	A	ATGTGTATG	1799.69	PASS	AB=0.995;AC=27;AF=0.500;AN=54;BaseQRankSum=2.204;DP=662;FS=10.024;HRun=0;HaplotypeScore=160.3066;InbreedingCoeff=0.6243;MQ=37.20;MQ0=45;MQRankSum=-1.300;QD=6.40;ReadPosRankSum=-2.861;VQSLOD=1.5633;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:78.37:0,78,2427	1/1:5,0:5:3.01:36,3,0	0/0:70,0:16:37.88:0,38,628	0/1:72,0:15:0.69:1,0,575	./.	1/1:10,0:10:3.01:40,3,0	1/1:19,0:14:8.93:90,9,0	1/1:31,0:20:5.27:240,5,0	1/1:8,0:8:12.04:173,12,0	1/1:24,0:22:41.78:661,42,0	0/1:7,0:7:0:0,0,0	0/0:40,0:40:24.95:0,25,505	0/0:38,0:38:42:0,42,677	0/0:29,0:29:27.08:0,27,549	0/0:13,0:13:0:0,0,0	1/1:9,0:9:3.01:50,3,0	1/1:12,0:12:10.60:174,11,0	0/1:4,0:5:12.87:96,0,13	1/1:12,0:5:6.02:94,6,0	1/1:10,0:12:8.99:90,9,0	1/1:15,29:39:6.02:193,6,0	0/0:12,0:12:3.01:0,3,72	0/0:20,0:20:14.98:0,15,269	0/0:32,0:33:6.02:0,6,93	1/1:3,0:4:3.01:41,3,0	0/0:40,0:38:99:0,99,1919	0/0:26,0:25:35.99:0,36,544	0/0:8,0:8:23.93:0,24,413
chr10	7140270	.	T	TATGCATG	5307.29	PASS	AB=1.000;AC=17;AF=0.354;AN=48;BaseQRankSum=-3.859;DP=502;FS=0.000;HRun=0;HaplotypeScore=84.7458;InbreedingCoeff=0.5263;MQ=35.17;MQ0=39;MQRankSum=-2.434;QD=26.40;ReadPosRankSum=1.477;VQSLOD=4.1598;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:85.43:0,85,2088	0/0:2,0:2:2.65:0,3,38	0/0:72,0:18:27.09:0,27,567	0/0:78,0:21:48.16:0,48,1097	1/1:3,0:3:0.38:1,0,0	./.	0/0:3,0:3:4.28:0,4,19	0/0:14,0:11:9.03:0,9,210	./.	0/0:7,0:5:12.03:0,12,170	0/0:5,0:5:3.95:0,4,47	1/1:6,35:43:12.04:457,12,0	1/1:2,34:38:14.38:494,14,0	1/1:5,23:31:8.65:277,9,0	0/0:1,0:1:0:0,0,0	./.	0/0:3,0:3:6.02:0,6,105	0/0:4,0:4:2.27:0,2,37	./.	0/0:3,0:3:0.94:0,1,2	0/0:16,0:13:3.44:0,3,21	0/0:2,8:12:0.94:0,1,1	1/1:11,3:14:3.01:45,3,0	0/0:4,24:31:3.01:0,3,66	1/1:1,0:1:0.47:1,0,0	1/1:9,30:38:87.25:2887,87,0	1/1:1,19:20:18.06:700,18,0	0/1:11,0:10:47.84:445,0,48
chr10	7140277	.	G	GA	633.85	PASS	AB=0.974;AC=14;AF=0.280;AN=50;BaseQRankSum=6.070;DP=505;FS=0.642;HRun=0;HaplotypeScore=100.8430;InbreedingCoeff=0.1412;MQ=33.85;MQ0=40;MQRankSum=-1.797;QD=3.34;ReadPosRankSum=2.918;VQSLOD=3.3126;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:89.80:0,90,1223	0/0:4,0:4:3.53:0,4,36	0/0:80,0:19:48.07:0,48,604	0/0:85,0:25:66.21:0,66,900	1/1:6,0:6:0.07:0,0,0	./.	0/0:4,0:3:0.47:0,0,1	0/0:17,0:12:9.03:0,9,126	./.	0/0:7,0:5:12.04:0,12,156	0/0:4,0:4:3.54:0,4,11	1/1:37,1:38:10.54:60,11,0	0/1:37,0:37:57.27:65,0,57	0/1:27,0:27:7.53:8,0,34	0/1:1,0:1:0:0,0,0	./.	0/0:4,0:4:3:0,3,29	0/0:4,0:4:5.86:0,6,57	0/0:3,0:2:3.01:0,3,34	0/0:3,0:3:0.53:0,1,1	0/0:11,0:9:0.72:0,1,35	0/0:12,0:12:6.70:0,7,67	1/1:7,6:13:3.01:45,3,0	0/0:34,0:34:12.04:0,12,166	1/1:1,0:1:0.47:1,0,0	0/1:37,0:37:99:427,0,185	0/1:19,0:19:32.70:33,0,63	0/1:9,2:10:92.70:117,0,93
chr10	7140285	.	GTGTA	G	164.45	PASS	AB=0.997;AC=17;AF=0.354;AN=48;BaseQRankSum=5.704;DP=511;FS=1.847;HRun=0;HaplotypeScore=124.3307;InbreedingCoeff=0.2076;MQ=33.98;MQ0=36;MQRankSum=-3.143;QD=0.97;ReadPosRankSum=-1.988;VQSLOD=1.6924;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:93.14:0,93,2456	0/0:3,0:3:0.79:0,1,16	0/0:73,0:17:44.98:0,45,1012	0/0:78,0:24:66.05:0,66,1446	1/1:6,0:6:0.46:1,0,0	./.	0/1:7,0:6:0:0,0,0	0/0:18,0:12:7.44:0,7,137	./.	0/1:7,0:5:0.42:0,0,28	1/1:5,0:5:3.59:9,4,0	0/1:37,1:38:42.87:43,0,74	0/1:41,0:41:14.91:15,0,404	0/0:32,0:32:21:0,21,340	./.	./.	1/1:5,0:5:11.71:109,12,0	0/1:5,0:5:4.61:28,0,5	1/1:7,0:2:2.98:22,3,0	0/1:2,0:2:0.01:0,0,0	0/0:8,0:6:0.06:0,0,2	0/0:13,0:13:8.85:0,9,236	0/0:9,4:13:2.90:0,3,67	0/0:33,0:33:18.06:0,18,487	0/1:1,0:1:0:0,0,0	0/1:38,0:36:48.19:48,0,1425	0/0:29,0:29:31.56:0,32,786	0/1:7,0:6:13.81:14,0,291
chr10	7140289	.	A	ATG	282.48	PASS	AB=0.917;AC=11;AF=0.204;AN=54;BaseQRankSum=4.315;DP=526;FS=23.975;HRun=0;HaplotypeScore=115.0121;InbreedingCoeff=0.5473;MQ=34.52;MQ0=37;MQRankSum=-2.084;QD=9.74;ReadPosRankSum=-1.905;VQSLOD=1.5546;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,1:41:93.11:0,93,1371	0/0:3,0:3:3:0,3,28	0/0:66,0:16:45.12:0,45,644	0/0:81,0:24:63.21:0,63,888	0/0:6,0:6:0:0,0,0	0/1:1,0:1:0:0,0,0	0/0:7,0:6:0:0,0,0	0/0:17,0:12:11.85:0,12,94	0/1:2,0:2:0:0,0,0	0/1:4,2:4:17.98:47,0,18	0/0:4,1:5:2.97:0,3,24	0/0:39,0:39:29.88:0,30,370	0/0:42,0:42:35.94:0,36,492	0/0:33,0:33:24.04:0,24,332	1/1:1,0:1:2.99:24,3,0	./.	1/1:1,4:5:11.80:147,12,0	1/1:4,2:6:9.51:115,10,0	1/1:6,2:2:6:82,6,0	0/0:1,0:1:0.47:0,0,1	0/0:7,0:5:2.51:0,3,10	0/0:13,0:13:11.86:0,12,163	0/0:16,0:16:5.99:0,6,89	0/0:36,0:36:21.04:0,21,298	0/0:0,1:1:0:0,0,0	0/0:39,0:37:94.87:0,95,1400	0/0:32,0:32:57.02:0,57,808	0/0:11,0:10:26.98:0,27,284
chr10	7140309	.	GCA	G	56.26	PASS	AB=0.975;AC=17;AF=0.304;AN=56;BaseQRankSum=6.609;DP=623;FS=15.025;HRun=0;HaplotypeScore=191.4046;InbreedingCoeff=0.4317;MQ=37.53;MQ0=38;MQRankSum=-4.022;QD=0.55;ReadPosRankSum=-4.660;VQSLOD=0.4653;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:74.69:0,75,1455	1/1:4,1:6:1.71:4,2,0	0/0:67,1:20:53.54:0,54,776	0/0:87,0:23:39.28:0,39,914	1/1:7,0:7:0.75:1,1,0	0/0:6,0:6:5.80:0,6,48	0/0:18,0:15:4.73:0,5,29	1/1:9,0:5:6.25:37,6,0	0/1:7,0:7:0.23:0,0,1	0/1:6,0:6:10.28:10,0,12	1/1:7,0:7:0.79:3,1,0	0/0:41,1:42:35.94:0,36,660	0/0:42,0:42:54.94:0,55,1042	0/0:32,0:32:35.90:0,36,694	1/1:13,0:13:7.63:42,8,0	1/1:12,0:12:10.45:54,10,0	0/0:8,0:8:7.88:0,8,56	0/1:12,0:12:37.24:37,0,96	0/1:16,0:5:1.59:2,0,22	0/0:6,0:6:1.98:0,2,63	0/0:18,1:17:12.04:0,12,85	0/0:16,0:16:14.70:0,15,305	0/0:17,0:17:14.57:0,15,275	0/0:40,1:41:35.77:0,36,713	0/1:6,0:6:6.67:7,0,16	0/0:40,0:38:99:0,102,1934	0/0:30,0:30:68.88:0,69,1377	0/0:12,0:11:27.09:0,27,522
chr10	7140335	.	GTATGCA	G	339.22	PASS	AB=0.912;AC=9;AF=0.161;AN=56;BaseQRankSum=8.969;DP=792;FS=51.312;HRun=0;HaplotypeScore=308.6523;InbreedingCoeff=0.1080;MQ=38.03;MQ0=32;MQRankSum=-6.841;QD=2.32;ReadPosRankSum=-2.234;VQSLOD=0.5398;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:53.68:0,54,1740	1/1:8,2:10:10.94:109,11,0	0/0:69,0:14:39.11:0,39,991	0/0:85,0:27:78.22:0,78,1888	0/1:8,4:12:31.15:31,0,72	0/0:12,0:12:11.56:0,12,301	0/0:31,0:28:20.21:0,20,520	0/0:28,0:18:10.69:0,11,819	0/0:17,0:17:1.88:0,2,78	0/1:17,1:16:82.49:82,0,859	0/1:17,2:19:0.60:1,0,1	0/0:47,0:47:47.29:0,47,1484	0/0:46,0:46:67.68:0,68,2424	0/0:32,0:32:38.75:0,39,1364	0/1:34,0:34:64.97:65,0,358	0/1:23,0:23:58.58:120,0,59	0/0:11,0:11:20.91:0,21,418	0/0:14,0:14:24.93:0,25,574	0/0:21,0:12:22.08:0,22,554	0/1:14,3:17:54.77:55,0,467	0/0:29,0:26:21.06:0,21,621	0/0:19,0:19:19.36:0,19,759	0/0:20,0:20:26.77:0,27,740	0/0:44,0:44:56.54:0,57,1964	0/1:12,1:13:12.43:12,0,150	0/0:38,0:38:99:0,105,3099	0/0:34,0:34:80.94:0,81,2649	0/0:17,2:18:10.58:0,11,936
chr10	7140385	.	A	ATGTGTGTATG	5926.34	PASS	AB=0.926;AC=25;AF=0.446;AN=56;BaseQRankSum=0.780;DP=936;FS=40.063;HRun=0;HaplotypeScore=435.0149;InbreedingCoeff=0.4687;MQ=37.84;MQ0=24;MQRankSum=-7.075;QD=12.66;ReadPosRankSum=2.309;VQSLOD=2.2356;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:31:43.83:0,44,1271	0/1:14,0:14:35.62:84,0,36	0/0:54,0:22:40.55:0,41,681	0/0:50,0:14:17.45:0,17,124	1/1:22,0:22:13.61:59,14,0	1/1:18,3:21:18.06:385,18,0	0/1:20,1:18:30.64:304,0,31	1/1:79,0:57:20.90:850,21,0	1/1:21,5:26:20.51:705,21,0	0/1:31,0:29:99:438,0,324	1/1:29,1:30:25.54:223,26,0	0/0:58,0:56:91.68:0,92,1996	0/0:47,0:47:69.63:0,70,1627	0/0:31,0:30:30.56:0,31,713	1/1:40,4:43:60.04:776,60,0	0/1:26,4:30:71.88:465,0,72	1/1:2,7:9:6.02:241,6,0	0/1:10,1:11:10.02:122,0,10	0/1:25,11:26:48.62:648,0,49	0/1:34,1:35:35.95:267,0,36	1/1:35,0:25:9.13:111,9,0	0/0:24,0:24:28.04:0,28,642	0/0:30,0:30:54.48:0,54,1201	0/0:53,0:53:77.89:0,78,1942	1/1:21,2:23:16.98:249,17,0	0/0:38,0:38:99:0,99,2184	0/0:29,0:29:46.42:0,46,1190	0/0:21,0:21:29.79:0,30,634
chr10	7140397	.	GTA	G	4248.54	PASS	AB=0.772;AC=16;AF=0.286;AN=56;BaseQRankSum=10.470;DP=890;FS=19.980;HRun=0;HaplotypeScore=366.9896;InbreedingCoeff=0.0841;MQ=36.81;MQ0=23;MQRankSum=-9.263;QD=11.15;ReadPosRankSum=-5.213;VQSLOD=2.9404;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:34:44.97:0,45,856	1/1:6,9:15:4.54:261,5,0	0/0:57,1:24:65.96:0,66,1092	0/0:46,0:10:23.93:0,24,391	1/1:5,15:20:16.58:215,17,0	0/1:22,2:24:26.64:27,0,87	0/1:12,6:15:33.86:162,0,34	0/1:38,17:36:99:223,0,194	0/0:26,0:26:25.05:0,25,171	0/1:23,15:35:99:539,0,163	0/1:12,18:30:8.01:412,0,8	0/0:56,0:54:99:0,99,1843	0/0:50,0:50:72.23:0,72,1347	0/0:30,0:29:31.66:0,32,564	0/1:25,16:40:99:674,0,103	0/1:22,10:32:80.86:412,0,81	0/0:7,0:7:5.95:0,6,41	0/0:8,0:8:7.71:0,8,63	0/1:20,3:14:64.48:64,0,192	1/1:7,26:33:10.70:834,11,0	0/1:29,1:21:13.76:40,0,14	0/0:26,0:26:36.11:0,36,678	0/0:27,0:27:47.30:0,47,1080	0/0:49,1:50:75.80:0,76,1431	0/1:8,14:22:24.47:385,0,24	0/0:43,0:43:99:0,126,2274	0/0:28,0:28:50.27:0,50,1060	0/0:18,0:18:24.41:0,24,616
chr10	7140421	.	GCA	G	566.32	PASS	AB=0.867;AC=16;AF=0.286;AN=56;BaseQRankSum=5.341;DP=781;FS=7.654;HRun=0;HaplotypeScore=345.2427;InbreedingCoeff=0.2516;MQ=37.35;MQ0=10;MQRankSum=-5.153;QD=2.19;ReadPosRankSum=-1.050;VQSLOD=0.9894;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:37:75.03:0,75,807	0/0:13,0:13:10.63:0,11,100	0/0:41,0:19:26.77:0,27,884	0/0:45,0:14:39.98:0,40,650	1/1:21,3:24:0.47:1,0,0	1/1:19,1:20:9.48:103,9,0	0/1:12,5:16:40.58:68,0,41	0/1:15,1:8:39.73:40,0,80	1/1:22,0:22:3.01:39,3,0	0/1:40,3:42:99:298,0,350	0/1:23,2:25:0.49:1,0,0	0/0:50,1:49:65.95:0,66,928	0/0:52,0:52:99:0,114,983	0/0:29,0:28:36.99:0,37,388	1/1:24,3:27:0.38:2,0,0	0/1:17,4:21:61.14:65,0,61	0/0:5,0:5:3.15:0,3,12	0/1:2,2:4:0.02:61,0,0	0/1:10,1:8:27.55:28,0,163	0/0:27,4:31:6.60:0,7,66	0/0:20,2:14:3.86:0,4,12	0/0:30,0:32:48.30:0,48,418	0/0:25,1:27:49.91:0,50,525	0/0:49,0:49:98.61:0,99,1046	0/1:27,2:29:0.49:0,0,1	0/0:40,2:41:7.49:0,7,1061	0/0:27,0:27:32.01:0,32,660	0/0:16,0:17:27.06:0,27,272
chr10	7140423	.	A	ATTG	5197.76	PASS	AB=0.823;AC=32;AF=0.571;AN=56;BaseQRankSum=-0.701;DP=794;FS=5.073;HRun=0;HaplotypeScore=350.6325;InbreedingCoeff=0.0638;MQ=37.26;MQ0=10;MQRankSum=2.184;QD=8.48;ReadPosRankSum=6.388;VQSLOD=3.1149;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:7,0:36:49.91:164,0,50	0/0:13,0:13:11.71:0,12,113	0/0:45,0:19:42.30:0,42,718	0/0:43,0:14:29.86:0,30,564	1/1:24,0:24:4.67:10,5,0	0/1:20,0:20:0.24:8,0,0	0/1:16,0:15:0.03:0,0,27	0/1:18,0:11:12.36:12,0,28	1/1:22,0:22:0.50:6,1,0	0/1:48,0:47:99:135,0,498	1/1:24,0:24:0.78:2,1,0	0/1:12,0:52:48.14:656,0,48	1/1:7,0:51:99:974,102,0	1/1:0,0:26:48.03:442,48,0	0/0:26,0:26:1.44:0,1,3	0/1:22,0:22:8.70:9,0,24	1/1:4,0:4:2.94:18,3,0	0/1:4,0:4:7.59:24,0,8	0/1:11,0:8:1.43:1,0,133	0/0:31,0:31:2.66:0,3,66	0/0:23,0:15:3.10:0,3,6	1/1:8,0:37:36.34:441,36,0	1/1:14,0:29:6.90:328,7,0	0/1:18,0:49:99:551,0,113	1/1:28,0:28:4.47:9,4,0	0/1:12,0:42:24.99:791,0,25	0/1:7,1:28:73.83:406,0,74	1/1:1,0:17:18.96:210,19,0
chr10	7140425	.	G	GTGTA	11944.12	PASS	AB=1.000;AC=39;AF=0.696;AN=56;BaseQRankSum=-1.869;DP=800;FS=9.954;HRun=0;HaplotypeScore=337.0152;InbreedingCoeff=0.2831;MQ=37.18;MQ0=11;MQRankSum=2.121;QD=18.12;ReadPosRankSum=6.533;VQSLOD=3.1150;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:36,0:35:32.27:45,0,32	0/0:12,0:12:6.64:0,7,51	0/0:46,0:20:3.79:0,4,684	0/0:43,0:15:32.04:0,32,582	1/1:24,0:24:1.65:6,2,0	1/1:20,0:20:12.51:146,13,0	0/1:15,0:14:7.26:120,0,7	0/0:15,0:10:7.13:0,7,61	1/1:20,0:20:6.02:93,6,0	0/1:49,0:48:99:521,0,295	0/1:25,0:25:0.68:1,0,3	1/1:58,0:56:85.26:1495,85,0	1/1:49,0:49:98.78:2005,99,0	1/1:27,0:26:48.16:915,48,0	1/1:25,0:26:14.56:159,15,0	1/1:22,0:22:12.67:145,13,0	1/1:4,0:4:3.01:57,3,0	0/1:4,0:4:13.74:106,0,14	1/1:12,0:7:14.68:180,15,0	0/1:31,0:31:9.86:10,0,13	0/0:15,9:16:1.14:0,1,3	1/1:38,0:38:42.29:901,42,0	1/1:29,0:29:24.42:729,24,0	0/1:49,0:49:53:1220,0,53	1/1:29,0:29:4.74:56,5,0	1/1:45,0:44:68.91:1742,69,0	1/1:30,0:30:6.82:920,7,0	1/1:17,0:17:12.83:374,13,0
chr10	7140427	.	G	GTATGTGTGTGTA	8252.97	PASS	AB=0.967;AC=34;AF=0.607;AN=56;BaseQRankSum=3.470;DP=819;FS=22.464;HRun=0;HaplotypeScore=419.1317;InbreedingCoeff=-0.1167;MQ=37.06;MQ0=12;MQRankSum=-7.125;QD=12.24;ReadPosRankSum=-6.814;VQSLOD=1.2725;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:61.65:0,62,946	0/1:12,0:12:66.37:66,0,87	0/0:48,0:20:13.07:0,13,979	0/0:44,0:17:5.15:0,5,692	0/1:26,0:26:16.24:16,0,35	1/1:5,16:21:18.03:668,18,0	0/1:14,2:15:22.83:479,0,23	1/1:18,0:11:17.74:213,18,0	1/1:4,19:24:6.02:310,6,0	0/1:32,19:56:43.84:2250,0,44	1/1:24,0:24:6.95:138,7,0	0/1:57,0:55:99:182,0,254	0/1:49,0:49:99:227,0,444	0/1:27,0:26:99:122,0,108	1/1:21,3:24:39.03:799,39,0	1/1:18,4:22:29.88:737,30,0	1/1:3,1:4:3.01:187,3,0	1/1:3,1:4:9.03:445,9,0	1/1:10,1:6:14.94:459,15,0	0/1:29,0:29:6.34:212,0,6	1/1:26,0:19:2.55:70,3,0	0/1:38,0:38:99:111,0,200	0/1:29,0:29:6.78:7,0,242	0/1:48,0:48:71.58:72,0,602	0/1:31,1:32:30.82:232,0,31	0/1:45,1:45:99:206,0,707	0/1:29,0:29:44.91:45,0,312	0/0:17,0:17:25.65:0,26,297
chr10	7140441	.	GTTTAT	G	1120.58	PASS	AB=0.648;AC=3;AF=0.054;AN=56;BaseQRankSum=5.118;DP=745;FS=7.499;HRun=0;HaplotypeScore=325.7304;InbreedingCoeff=-0.0426;MQ=37.72;MQ0=11;MQRankSum=-2.751;QD=11.67;ReadPosRankSum=3.589;VQSLOD=1.5825;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:30:69.92:0,70,1507	0/1:3,10:13:42.55:161,0,43	0/0:49,0:23:50.04:0,50,1455	0/0:48,0:21:63.18:0,63,1586	0/0:5,17:24:13.10:0,13,233	0/0:18,0:19:12.66:0,13,224	0/0:14,1:15:32.18:0,32,712	0/0:21,0:14:38.99:0,39,1242	0/0:18,0:18:8.24:0,8,180	0/1:39,18:57:99:1036,0,1498	0/0:3,10:13:3.33:0,3,9	0/0:50,0:48:99:0,106,2265	0/0:46,0:46:99:0,113,2366	0/0:24,0:23:56.52:0,57,1179	0/0:14,0:14:30.44:0,30,475	0/0:15,0:15:29.30:0,29,672	0/0:4,0:4:3.01:0,3,99	0/0:5,0:5:9.03:0,9,182	0/0:9,0:4:11.25:0,11,296	0/1:10,13:25:23.30:23,0,246	0/0:23,0:18:25.90:0,26,521	0/0:34,0:34:75.43:0,75,1625	0/0:28,0:28:58.65:0,59,1387	0/0:45,0:45:99:0,103,2301	0/0:6,23:29:19.69:0,20,243	0/0:49,0:48:99:0,135,3926	0/0:25,0:25:65.72:0,66,1745	0/0:11,0:11:27.09:0,27,821
chr10	7140453	.	GCA	G	599.20	PASS	AB=0.749;AC=9;AF=0.161;AN=56;BaseQRankSum=8.391;DP=720;FS=2.432;HRun=0;HaplotypeScore=294.6433;InbreedingCoeff=-0.0741;MQ=38.42;MQ0=10;MQRankSum=-4.120;QD=3.22;ReadPosRankSum=-1.871;VQSLOD=1.7997;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,1:25:32.70:0,33,620	0/1:2,11:13:61.20:83,0,61	0/0:54,0:21:47.36:0,47,887	0/0:43,0:18:36.44:0,36,813	0/0:6,21:27:8.30:0,8,181	0/1:17,0:17:5.95:6,0,113	0/0:14,1:15:10.49:0,10,490	0/0:29,0:23:66.23:0,66,1263	0/1:14,0:14:4.55:5,0,113	0/1:37,22:58:99:588,0,1039	0/1:2,10:12:0.35:0,0,0	0/0:47,0:47:62.65:0,63,1210	0/0:41,0:41:55.64:0,56,1176	0/0:22,0:21:32.95:0,33,646	0/1:13,0:13:19.64:20,0,226	0/0:15,0:15:13.01:0,13,473	0/1:2,1:3:1.80:2,0,55	0/0:5,0:5:7.84:0,8,77	0/0:11,0:6:15.05:0,15,305	0/1:10,17:27:8.36:8,0,228	0/0:24,0:20:16.88:0,17,270	0/0:29,0:29:51.12:0,51,1015	0/0:30,0:30:45.01:0,45,901	0/0:37,1:38:62.83:0,63,1192	0/1:6,22:28:2.01:2,0,172	0/0:43,0:42:99:0,107,1993	0/0:24,1:25:53.91:0,54,871	0/0:10,0:10:21.07:0,21,417
chr10	7140455	.	ATG	A	264.25	PASS	AB=0.912;AC=9;AF=0.161;AN=56;BaseQRankSum=6.684;DP=746;FS=25.274;HRun=0;HaplotypeScore=295.3217;InbreedingCoeff=0.0387;MQ=36.74;MQ0=10;MQRankSum=-3.021;QD=2.00;ReadPosRankSum=-4.398;VQSLOD=0.3479;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:24:27.09:0,27,472	0/0:14,0:14:4.74:0,5,57	0/0:54,0:21:43.58:0,44,762	0/0:40,0:17:41.69:0,42,638	0/0:32,0:32:8.77:0,9,158	0/1:17,0:17:25.01:25,0,97	0/0:15,0:15:2.90:0,3,349	0/0:29,1:24:63.69:0,64,1103	0/1:14,0:14:25.18:25,0,97	0/0:61,0:58:79.50:0,80,928	0/1:15,0:15:0:0,0,1	0/0:49,0:48:59.97:0,60,1003	0/0:45,0:45:53.86:0,54,941	0/0:23,0:22:29.67:0,30,524	0/1:9,4:13:99:170,0,182	0/1:11,4:15:39.26:39,0,394	0/0:3,0:3:5.98:0,6,73	1/1:4,1:5:3.01:34,3,0	0/0:11,0:6:15.05:0,15,266	0/0:29,0:29:17.71:0,18,249	0/1:19,5:20:79.55:80,0,162	0/0:31,0:30:50.82:0,51,895	0/0:33,0:33:41.85:0,42,693	0/0:38,0:38:39.74:0,40,878	0/1:29,0:29:21.48:21,0,148	0/0:41,0:40:85.75:0,86,1427	0/0:27,0:27:48.89:0,49,693	0/0:10,0:10:21.03:0,21,339
chr10	7140469	.	G	GTA	276.07	PASS	AB=0.958;AC=9;AF=0.161;AN=56;BaseQRankSum=8.342;DP=669;FS=27.339;HRun=0;HaplotypeScore=259.9822;InbreedingCoeff=0.0163;MQ=36.42;MQ0=11;MQRankSum=-3.808;QD=2.24;ReadPosRankSum=-4.745;VQSLOD=0.8569;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:18:23.91:0,24,365	0/0:14,0:14:10.22:0,10,110	0/0:44,0:17:51.13:0,51,716	0/0:35,0:15:42.13:0,42,600	0/0:31,0:32:9.30:0,9,132	0/1:12,0:12:20.72:21,0,82	0/0:13,0:13:21.02:0,21,293	0/0:36,0:27:75.20:0,75,1074	0/1:14,0:14:20.12:20,0,83	0/0:50,0:47:99:0,103,1049	0/1:14,0:14:0.02:0,0,0	0/0:43,0:42:49.58:0,50,747	0/0:39,0:39:43.82:0,44,791	0/0:22,0:21:14.44:0,14,382	0/1:13,0:13:99:153,0,153	0/1:15,0:15:30.31:30,0,336	0/0:3,0:3:6.02:0,6,75	1/1:3,2:5:1.82:5,2,0	0/0:10,0:7:15.05:0,15,228	0/0:25,0:25:14.80:0,15,210	0/1:14,9:21:99:154,0,115	0/0:31,0:30:46.89:0,47,739	0/0:29,0:29:23.54:0,24,449	0/0:32,0:32:0.22:0,0,546	0/1:26,0:26:17.59:18,0,126	0/0:35,0:35:98.74:0,99,1240	0/0:25,0:25:55.14:0,55,633	0/0:9,0:9:21.02:0,21,293
chr10	7141361	.	A	AGTAAGGG	15036.90	PASS	AC=34;AF=0.630;AN=54;BaseQRankSum=-1.338;DP=367;FS=16.738;HRun=0;HaplotypeScore=81.9943;InbreedingCoeff=0.9401;MQ=65.32;MQ0=0;MQRankSum=-11.867;QD=60.63;ReadPosRankSum=-1.668;VQSLOD=3.2814;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,15:21:33.11:1270,33,0	1/1:0,8:9:21.07:824,21,0	0/0:7,0:7:18.01:0,18,436	0/0:9,0:8:11.71:0,12,305	1/1:0,5:10:6:67,6,0	1/1:0,8:17:21.07:785,21,0	1/1:0,15:23:36.12:1334,36,0	1/1:0,5:13:39.11:1202,39,0	1/1:0,16:19:45.15:1879,45,0	1/1:0,3:9:27.03:731,27,0	1/1:0,6:9:3.01:33,3,0	0/0:18,0:18:54.19:0,54,1437	0/0:12,0:12:36.12:0,36,990	0/0:21,0:21:60.21:0,60,1631	1/1:0,8:10:24.08:906,24,0	1/1:0,21:24:48.16:2005,48,0	1/1:0,6:10:12.04:484,12,0	1/1:1,10:11:24.08:1004,24,0	1/1:1,5:11:27.06:855,27,0	1/1:0,7:11:20.98:555,21,0	1/1:2,20:28:27.30:513,27,0	0/0:9,0:9:27.09:0,27,746	0/0:9,0:9:24.08:0,24,630	0/0:18,0:18:39.13:0,39,1088	1/1:0,8:13:18.06:590,18,0	0/0:6,0:6:15.05:0,15,365	0/0:10,0:10:30.10:0,30,825	./.
chr10	7142708	.	G	GA	5984.87	PASS	AC=34;AF=0.630;AN=54;BaseQRankSum=10.756;DP=495;FS=0.000;HRun=7;HaplotypeScore=182.2978;InbreedingCoeff=0.9106;MQ=38.18;MQ0=47;MQRankSum=-9.663;QD=19.56;ReadPosRankSum=-4.089;VQSLOD=1.9651;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,17:22:40.54:465,41,0	1/1:2,5:6:8.97:121,9,0	./.	0/0:4,0:2:2.32:0,2,9	1/1:12,9:18:19.53:307,20,0	1/1:3,10:12:21.03:253,21,0	1/1:9,9:14:23.97:267,24,0	1/1:6,16:19:47.58:562,48,0	1/1:2,16:18:41.99:477,42,0	1/1:16,17:29:68.72:747,69,0	1/1:8,12:18:29.39:315,29,0	0/0:9,0:8:15.01:0,15,139	0/0:13,0:13:21.02:0,21,202	0/0:23,0:23:51.08:0,51,492	1/1:16,17:32:59.73:629,60,0	1/1:5,15:18:35.97:391,36,0	1/1:2,9:10:19.13:315,19,0	1/1:10,13:15:33.02:407,33,0	1/1:4,8:12:24.07:287,24,0	1/1:6,7:9:14.97:165,15,0	1/1:2,1:3:2.99:23,3,0	0/0:18,0:16:21.02:0,21,200	0/0:23,0:22:42.06:0,42,403	0/0:25,0:24:45.06:0,45,434	1/1:4,11:12:21.06:253,21,0	0/0:25,0:19:5.95:0,6,338	0/0:23,1:24:34.15:0,34,362	0/0:16,0:10:23.07:0,23,208
chr10	7142725	.	A	AC	1782.83	PASS	AB=0.700;AC=17;AF=0.304;AN=56;BaseQRankSum=10.424;DP=513;FS=9.379;HRun=0;HaplotypeScore=208.4626;InbreedingCoeff=-0.3278;MQ=46.68;MQ0=30;MQRankSum=-7.465;QD=5.83;ReadPosRankSum=4.430;VQSLOD=2.5038;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:7,21:27:82.36:261,0,82	1/1:2,5:6:1.85:46,2,0	0/0:21,0:6:10.47:0,10,73	0/0:15,0:11:29.34:0,29,239	0/1:12,4:14:71.33:71,0,112	0/1:6,9:14:82.53:125,0,83	0/1:14,10:21:99:118,0,213	0/1:21,7:26:99:168,0,260	0/1:13,12:24:99:177,0,190	0/1:17,10:24:99:159,0,130	0/1:11,5:15:55.61:56,0,77	0/0:11,0:10:16.47:0,16,233	0/0:13,0:13:36.09:0,36,479	0/0:20,0:20:52.54:0,53,667	0/1:20,10:29:99:108,0,219	0/1:7,10:15:99:149,0,106	0/1:5,11:16:90.42:117,0,90	0/1:13,8:15:23.62:154,0,24	0/1:6,7:12:74.91:92,0,75	0/1:6,7:11:62.61:76,0,63	0/0:4,0:4:8.31:0,8,42	0/0:12,0:11:19.18:0,19,343	0/0:23,0:22:51.10:0,51,667	0/0:25,0:25:59.30:0,59,724	0/1:8,2:8:55.22:65,0,55	0/0:21,0:20:46.20:0,46,666	0/0:29,0:29:70.23:0,70,938	0/0:13,0:6:18.02:0,18,225
chr10	7142728	.	A	AC	2580.17	PASS	AB=0.714;AC=25;AF=0.446;AN=56;BaseQRankSum=13.246;DP=524;FS=0.000;HRun=0;HaplotypeScore=212.7693;InbreedingCoeff=0.4359;MQ=48.21;MQ0=28;MQRankSum=-8.539;QD=8.19;ReadPosRankSum=4.359;VQSLOD=3.5737;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,21:27:21.14:340,21,0	1/1:3,5:7:11.62:72,12,0	0/0:22,0:7:11.21:0,11,98	0/0:17,0:12:24.90:0,25,237	0/1:10,4:13:6.88:89,0,7	1/1:8,9:16:5.94:171,6,0	0/1:14,10:21:19.82:189,0,20	0/1:20,7:25:69.39:134,0,69	0/1:13,12:24:10.48:233,0,10	1/1:18,10:25:14.40:267,14,0	0/1:11,5:15:2.95:108,0,3	0/0:13,0:12:22.47:0,22,284	0/0:13,0:13:36.05:0,36,475	0/0:20,0:20:52.56:0,53,673	1/1:21,10:30:11.36:265,11,0	1/1:7,10:15:3.84:188,4,0	0/1:5,11:16:3.19:141,0,3	1/1:14,8:16:29.37:237,29,0	0/1:7,7:13:0.40:160,0,0	0/1:5,7:11:1.58:88,0,2	1/1:5,0:5:9.15:47,9,0	0/0:13,0:12:22.14:0,22,366	0/0:22,0:21:51.06:0,51,663	0/0:26,0:26:59.15:0,59,729	0/1:8,2:8:5.99:42,0,6	0/0:21,0:20:46.15:0,46,660	0/0:30,0:30:70.23:0,70,943	0/0:12,0:7:18.04:0,18,231
chr10	7142734	.	A	AAC	9235.74	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=15.968;DP=522;FS=2.118;HRun=0;HaplotypeScore=198.6633;InbreedingCoeff=0.9915;MQ=52.19;MQ0=22;MQRankSum=-12.911;QD=29.89;ReadPosRankSum=2.487;VQSLOD=5.9910;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,18:27:71.74:1017,72,0	1/1:2,6:7:14.92:229,15,0	0/0:25,0:10:23.56:0,24,229	0/0:19,0:14:29.47:0,29,407	1/1:6,7:12:29.35:291,29,0	1/1:8,8:16:41.62:528,42,0	1/1:17,9:23:45.80:603,46,0	1/1:17,1:16:23.70:330,24,0	1/1:16,11:26:70.27:752,70,0	1/1:10,16:23:62.79:970,63,0	1/1:4,10:13:33.02:461,33,0	0/0:16,0:15:36.11:0,36,527	0/0:15,0:15:39.09:0,39,559	0/0:21,0:21:57.14:0,57,827	1/1:13,19:31:86.45:1164,86,0	1/1:10,8:16:47.53:573,48,0	1/1:7,11:18:50.08:588,50,0	1/1:10,9:15:41.64:572,42,0	1/1:12,7:18:50.42:510,50,0	1/1:4,8:11:23.92:333,24,0	1/1:5,0:6:14.82:140,15,0	0/0:12,0:11:27.09:0,27,405	0/0:23,0:22:51.17:0,51,781	0/0:21,0:21:57.02:0,57,841	1/1:7,2:7:17.60:173,18,0	0/0:23,0:22:57.15:0,57,831	0/0:29,0:29:77.82:0,78,1126	0/0:9,0:6:18.06:0,18,276
chr10	7142740	.	A	AACAAAC	17004.06	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=12.100;DP=527;FS=3.085;HRun=0;HaplotypeScore=201.7225;InbreedingCoeff=0.9921;MQ=56.59;MQ0=12;MQRankSum=-14.183;QD=53.81;ReadPosRankSum=3.251;VQSLOD=4.9516;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,17:30:75:1828,75,0	1/1:4,0:7:14.56:368,15,0	0/0:27,0:12:26.09:0,26,410	0/0:22,0:17:38.92:0,39,764	1/1:6,0:11:29.83:479,30,0	1/1:10,7:18:47.80:1082,48,0	1/1:16,8:23:53.90:1130,54,0	1/1:17,0:18:51.11:693,51,0	1/1:17,10:27:71.83:1527,72,0	1/1:12,0:23:63.22:1546,63,0	1/1:6,0:14:33.06:658,33,0	0/0:16,0:16:42.09:0,42,862	0/0:12,0:12:36.12:0,36,774	0/0:20,0:20:57.20:0,57,1318	1/1:15,0:31:87.17:1965,87,0	1/1:8,8:14:42.07:1044,42,0	1/1:8,9:19:54:1217,54,0	1/1:13,0:14:39.13:848,39,0	1/1:17,5:23:65.27:1322,65,0	1/1:8,6:13:29.86:683,30,0	1/1:7,0:8:18.06:312,18,0	0/0:10,0:10:24.07:0,24,520	0/0:23,0:23:57.19:0,57,1282	0/0:22,0:22:63.19:0,63,1354	1/1:6,2:6:14.88:303,15,0	0/0:23,0:23:66.08:0,66,1248	0/0:27,0:27:75.24:0,75,1707	0/0:9,0:6:18.06:0,18,382
chr10	7142971	.	A	AGT	9058.42	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-0.965;DP=431;FS=19.665;HRun=0;HaplotypeScore=69.8002;InbreedingCoeff=0.7463;MQ=71.41;MQ0=12;MQRankSum=-3.013;QD=28.04;ReadPosRankSum=3.930;VQSLOD=4.0058;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:19:30.08:481,30,0	1/1:2,0:2:6.02:86,6,0	0/0:47,0:20:35.71:0,36,687	0/0:61,0:23:59.75:0,60,747	1/1:11,0:10:18.06:284,18,0	1/1:7,0:7:12.04:193,12,0	1/1:14,0:14:28.17:381,28,0	1/1:33,0:33:67.49:1193,67,0	1/1:16,0:16:27.08:393,27,0	1/1:14,0:14:39.13:584,39,0	1/1:10,0:10:18.06:295,18,0	1/1:13,1:14:27.09:423,27,0	1/1:5,0:5:5.98:69,6,0	1/1:11,1:11:20.99:306,21,0	1/1:14,0:14:15.05:231,15,0	1/1:15,0:15:24.06:324,24,0	1/1:8,0:8:24.08:338,24,0	1/1:10,0:10:27.06:414,27,0	1/1:20,0:18:39.62:551,40,0	1/1:4,13:17:3.01:36,3,0	1/1:23,0:23:47.75:701,48,0	1/1:5,0:5:9.03:130,9,0	1/1:4,0:3:9.03:147,9,0	1/1:9,0:9:12.04:178,12,0	1/1:10,0:10:18.05:274,18,0	1/1:12,0:12:27.06:367,27,0	1/1:10,0:10:27.09:421,27,0	1/1:8,0:7:17.98:257,18,0
chr10	7143014	.	TCTCTCTCTCCCCCC	T	711.26	PASS	AB=1.000;AC=24;AF=0.462;AN=52;BaseQRankSum=1.400;DP=269;FS=2.657;HRun=0;HaplotypeScore=60.3361;InbreedingCoeff=0.2207;MQ=28.93;MQ0=58;MQRankSum=-1.297;QD=4.77;ReadPosRankSum=0.378;VQSLOD=1.5384;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:16:5.65:0,6,76	./.	0/1:8,0:2:1.29:1,0,15	0/0:18,0:2:3.48:0,3,40	./.	1/1:12,0:10:1.24:3,1,0	1/1:7,0:7:8.88:79,9,0	0/1:17,0:12:14.02:199,0,14	1/1:11,0:11:0.47:1,0,0	0/1:8,0:6:10.65:151,0,11	0/0:9,0:7:2.50:0,2,9	0/1:11,0:9:8.55:9,0,10	0/0:6,0:4:10.42:0,10,108	1/1:12,0:7:3:26,3,0	0/0:7,0:6:6.48:0,6,63	1/1:13,0:11:3.43:21,3,0	1/1:9,0:8:8.78:88,9,0	0/1:6,0:4:17.13:56,0,17	1/1:7,0:4:5.95:87,6,0	0/0:7,0:5:0.47:0,0,1	0/0:15,0:10:3:0,3,26	0/0:7,0:3:5.75:0,6,32	0/0:6,0:3:2.97:0,3,20	0/0:16,0:11:0.47:0,0,2	1/1:2,5:7:3.01:120,3,0	0/1:11,0:10:0.81:1,0,59	0/0:8,0:7:6.26:0,6,40	1/1:10,0:1:2.50:9,2,0
chr10	7143016	.	TCTCTCTCCC	T	383.12	PASS	AB=1.000;AC=22;AF=0.458;AN=48;BaseQRankSum=2.021;DP=258;FS=1.480;HRun=0;HaplotypeScore=51.2346;InbreedingCoeff=0.1522;MQ=29.23;MQ0=55;MQRankSum=-2.478;QD=2.97;ReadPosRankSum=1.839;VQSLOD=1.4979;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:16:6.55:0,7,21	./.	0/0:8,0:2:0:0,0,0	0/0:14,0:2:1.49:0,1,39	./.	./.	0/0:7,0:7:3.03:0,3,7	0/1:17,0:12:9.47:26,0,9	0/0:10,0:10:0:0,0,0	0/1:8,0:6:8.33:14,0,8	./.	1/1:4,7:9:0.84:52,1,0	0/1:6,0:4:21.06:68,0,21	1/1:12,0:7:3.01:59,3,0	0/0:7,0:6:5.61:0,6,66	0/1:12,0:10:0.01:0,0,0	1/1:9,0:8:2.49:12,2,0	0/1:5,0:3:8.78:9,0,28	1/1:6,0:3:0.33:5,0,0	0/0:7,0:5:0.47:0,0,1	0/0:14,0:9:2.84:0,3,14	1/1:8,0:4:2.37:8,2,0	0/0:6,0:3:0:0,0,0	0/0:16,0:11:0.47:0,0,1	1/1:7,0:7:3.01:61,3,0	1/1:10,0:9:3.34:107,3,0	1/1:9,0:8:5.84:73,6,0	0/1:9,0:1:0:0,0,0
chr10	7143018	.	TCTCTCCCCCC	T	707.76	PASS	AB=1.000;AC=22;AF=0.500;AN=44;BaseQRankSum=0.329;DP=250;FS=1.710;HRun=0;HaplotypeScore=50.3293;InbreedingCoeff=0.3557;MQ=28.69;MQ0=55;MQRankSum=-0.851;QD=6.05;ReadPosRankSum=1.010;VQSLOD=1.5044;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:16:2.40:0,2,8	./.	0/1:8,0:2:1.38:1,0,15	0/0:14,0:2:3.48:0,3,40	./.	./.	1/1:6,0:6:6.01:64,6,0	1/1:15,0:10:17.71:248,18,0	0/1:10,0:10:0:0,0,0	1/1:2,6:6:12.03:194,12,0	./.	0/1:11,0:9:9.67:11,0,10	0/0:6,0:4:10.41:0,10,91	1/1:12,0:7:2.50:9,2,0	0/0:6,0:5:3.43:0,3,20	1/1:11,0:9:0.46:1,0,0	1/1:9,0:8:5.98:75,6,0	1/1:5,0:3:3.48:62,3,0	1/1:6,0:3:5.98:87,6,0	0/0:7,0:5:0.47:0,0,1	./.	0/0:8,0:4:2.94:0,3,19	0/0:6,0:3:2.97:0,3,20	0/0:15,0:10:0.94:0,1,2	1/1:6,0:6:3.01:77,3,0	0/1:10,0:9:5.22:5,0,27	0/0:9,0:8:5.73:0,6,38	./.
chr10	7143924	.	AG	A	16307.11	PASS	AB=0.909;AC=35;AF=0.625;AN=56;BaseQRankSum=13.038;DP=656;FS=1.683;HRun=1;HaplotypeScore=88.3377;InbreedingCoeff=0.9238;MQ=74.04;MQ0=0;MQRankSum=-4.384;QD=37.66;ReadPosRankSum=3.185;VQSLOD=5.3911;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,39:39:99:1384,99,0	1/1:0,8:8:24.08:336,24,0	0/0:24,0:24:69.22:0,69,1048	0/0:36,0:36:99:0,105,1562	1/1:0,28:28:78.17:1047,78,0	1/1:0,21:21:54.18:755,54,0	1/1:1,22:23:60.11:814,60,0	1/1:0,31:31:93.31:1300,93,0	1/1:0,18:18:51.17:713,51,0	1/1:0,25:25:75.25:1049,75,0	1/1:0,30:30:90.30:1259,90,0	0/0:15,0:15:45.15:0,45,716	0/0:16,0:16:48.15:0,48,742	0/0:24,0:24:69.22:0,69,1078	1/1:0,18:18:51.17:712,51,0	1/1:0,25:25:72.24:1002,72,0	1/1:0,30:30:90.30:1259,90,0	1/1:0,16:16:42.14:587,42,0	1/1:0,17:17:51.14:690,51,0	1/1:0,35:35:99:1444,105,0	1/1:0,22:22:60.20:839,60,0	0/0:20,0:20:57.19:0,57,911	0/0:20,0:20:60.20:0,60,959	0/0:37,0:37:96.33:0,96,1534	1/1:0,27:26:78.26:1091,78,0	0/1:18,2:20:23.67:24,0,803	0/0:20,0:20:60.19:0,60,936	0/0:11,0:11:30.10:0,30,480
chr10	7144998	.	AC	A	14017.20	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=19.262;DP=702;FS=11.385;HRun=3;HaplotypeScore=154.8017;InbreedingCoeff=0.9987;MQ=79.35;MQ0=0;MQRankSum=-6.316;QD=31.79;ReadPosRankSum=2.865;VQSLOD=2.8438;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,50:54:99:1616,136,0	1/1:0,9:9:18.06:216,18,0	0/0:19,0:19:57.04:0,57,714	0/0:19,0:19:46.03:0,46,627	1/1:3,18:21:51.15:600,51,0	1/1:3,15:18:42.13:504,42,0	1/1:1,41:42:99:1399,117,0	1/1:2,27:29:75.23:903,75,0	1/1:2,31:33:93.28:1110,93,0	1/1:0,23:23:69.17:814,69,0	1/1:0,14:14:42.08:479,42,0	0/0:39,0:39:99:0,117,1683	0/0:29,0:29:81.23:0,81,1109	0/0:23,0:23:69.22:0,69,972	1/1:1,28:29:81.24:961,81,0	1/1:0,22:22:63.19:750,63,0	1/1:2,28:30:83.13:989,83,0	1/1:0,20:20:51.16:614,51,0	1/1:0,16:16:42.11:490,42,0	1/1:1,16:17:45.14:535,45,0	1/1:2,45:47:99:1428,120,0	0/0:20,0:20:60.19:0,60,845	0/0:16,0:16:45.13:0,45,628	0/0:31,0:31:90.29:0,90,1277	1/1:0,17:17:51.15:607,51,0	0/0:27,1:28:44.84:0,45,1052	0/0:28,0:27:81.27:0,81,1165	0/0:9,0:9:27.07:0,27,367
chr10	7147648	.	ATT	A	4144.38	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=7.074;DP=632;FS=7.715;HRun=4;HaplotypeScore=152.9001;InbreedingCoeff=0.9535;MQ=63.62;MQ0=18;MQRankSum=-3.500;QD=10.31;ReadPosRankSum=2.537;VQSLOD=-0.0944;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,22:24:14.25:165,14,0	1/1:8,0:8:11.85:98,12,0	0/0:31,0:23:42.32:0,42,536	0/0:33,0:19:44.13:0,44,492	1/1:16,0:16:16.32:119,16,0	1/1:27,0:27:32.76:261,33,0	1/1:27,0:27:14.72:111,15,0	1/1:26,0:26:71.78:603,72,0	1/1:27,0:27:15.83:130,16,0	1/1:29,0:29:68.85:562,69,0	1/1:22,0:21:14.81:106,15,0	0/0:23,0:23:62.72:0,63,443	0/0:14,0:14:31.87:0,32,215	0/0:21,0:21:48.21:0,48,329	1/1:42,0:42:35.64:263,36,0	1/1:19,0:19:29.50:234,29,0	1/1:25,0:23:55.52:408,56,0	1/1:19,0:18:41.73:309,42,0	1/1:21,0:21:46.70:376,47,0	1/1:23,0:22:26.64:190,27,0	1/1:23,0:22:2.68:11,3,0	0/0:19,0:18:36.89:0,37,269	0/0:13,0:13:26.29:0,26,165	0/0:24,0:24:54.89:0,55,389	1/1:22,0:21:26.39:199,26,0	0/0:24,0:24:67.68:0,68,532	0/0:24,0:24:43.42:0,43,291	0/0:4,0:4:11.04:0,11,85
chr10	7147649	.	TTTTGTGTGTGTGTG	T	12574.62	PASS	AB=0.826;AC=31;AF=0.554;AN=56;BaseQRankSum=3.451;DP=637;FS=5.980;HRun=0;HaplotypeScore=227.0164;InbreedingCoeff=0.9007;MQ=63.45;MQ0=18;MQRankSum=-4.343;QD=33.35;ReadPosRankSum=2.148;VQSLOD=3.7626;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:15.05:0,15,522	1/1:0,0:8:11.55:432,12,0	0/0:30,0:23:40.76:0,41,565	0/0:33,0:19:43.66:0,44,478	1/1:2,0:16:21.04:572,21,0	1/1:1,23:27:36.12:1256,36,0	1/1:1,26:27:14.89:589,15,0	1/1:26,0:26:71.78:603,72,0	1/1:1,27:28:24.08:787,24,0	1/1:1,0:29:70.30:1487,70,0	1/1:1,0:21:21.05:503,21,0	0/0:25,0:25:70:0,70,1190	0/0:14,0:14:36.95:0,37,588	0/0:21,0:21:52.66:0,53,1005	1/1:0,0:42:36.12:1143,36,0	1/1:0,19:19:29.89:1233,30,0	1/1:26,0:24:58.44:567,58,0	0/1:15,0:18:6.91:536,0,7	1/1:4,16:19:50.94:731,51,0	1/1:2,20:22:27.09:977,27,0	1/1:1,0:22:3.01:95,3,0	0/0:20,0:19:45.87:0,46,850	0/0:13,0:13:33:0,33,533	0/0:26,0:26:60.92:0,61,1059	1/1:0,20:22:27.09:1063,27,0	0/0:25,0:25:75.18:0,75,1380	0/0:24,0:24:55.13:0,55,1036	0/0:4,0:4:12.01:0,12,153
chr10	7147651	.	TTGTGTG	T	6416.20	PASS	AB=1.000;AC=45;AF=0.865;AN=52;BaseQRankSum=-0.387;DP=641;FS=1.434;HRun=0;HaplotypeScore=180.6349;InbreedingCoeff=0.4004;MQ=60.70;MQ0=20;MQRankSum=-3.615;QD=12.13;ReadPosRankSum=2.987;VQSLOD=3.8951;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:27:17.48:0,17,189	1/1:8,0:8:11.63:167,12,0	./.	0/0:32,0:18:0.47:0,0,1	1/1:15,0:15:14.78:180,15,0	1/1:27,0:27:33.05:425,33,0	1/1:27,0:27:14.25:159,14,0	./.	0/1:28,0:28:1.94:166,0,2	1/1:29,0:29:33.11:460,33,0	1/1:22,0:21:10.44:128,10,0	1/1:18,5:25:24.08:442,24,0	1/1:8,7:16:14.45:279,14,0	1/1:12,9:20:21.07:418,21,0	1/1:42,0:42:29.28:371,29,0	1/1:20,0:20:29.25:370,29,0	0/1:26,0:24:2.69:8,0,3	1/1:19,0:18:9.50:127,10,0	0/1:19,0:18:1.72:98,0,2	1/1:24,0:23:22.50:256,22,0	1/1:23,0:22:3:28,3,0	1/1:9,10:20:20.94:279,21,0	1/1:6,6:14:18.53:313,19,0	1/1:23,3:27:21.95:373,22,0	1/1:23,0:22:26.27:327,26,0	1/1:16,10:25:27.06:457,27,0	1/1:9,13:23:26.14:524,26,0	1/1:3,1:4:3.01:61,3,0
chr10	7147663	.	G	GAT	678.19	PASS	AB=0.978;AC=10;AF=0.179;AN=56;BaseQRankSum=1.831;DP=673;FS=0.611;HRun=0;HaplotypeScore=174.8598;InbreedingCoeff=-0.1122;MQ=52.71;MQ0=29;MQRankSum=-3.247;QD=2.71;ReadPosRankSum=-6.293;VQSLOD=0.3162;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:29.71:0,30,409	0/0:8,0:8:11.37:0,11,58	0/0:24,0:10:18.11:0,18,378	0/0:39,0:16:41.70:0,42,569	0/0:15,0:15:17.15:0,17,130	0/1:31,0:31:99:125,0,138	0/1:34,0:33:67.47:107,0,67	0/0:17,0:17:29.08:0,29,639	0/1:31,0:31:69.80:77,0,70	0/0:30,0:29:49.67:0,50,421	0/0:22,0:21:10.57:0,11,104	0/0:28,0:28:61.73:0,62,777	0/0:16,0:16:33.44:0,33,381	0/0:19,0:17:32.92:0,33,341	0/0:43,0:43:5.34:0,5,185	0/1:24,0:24:69.92:70,0,106	0/1:25,3:26:99:122,0,583	0/0:17,0:14:29.55:0,30,299	0/1:21,1:20:99:119,0,164	0/1:29,1:28:99:127,0,123	1/1:25,0:23:0.89:2,1,0	0/0:23,0:22:47.99:0,48,564	0/0:15,0:15:29.96:0,30,324	0/0:29,0:29:57:0,57,701	0/1:25,0:24:65.04:65,0,93	0/0:24,0:23:66.04:0,66,833	0/0:23,0:23:52.97:0,53,603	0/0:1,0:1:2.98:0,3,21
chr10	7147896	.	AG	A	18254.54	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-6.400;DP=655;FS=0.532;HRun=5;HaplotypeScore=71.2520;InbreedingCoeff=0.9801;MQ=85.09;MQ0=0;MQRankSum=-11.181;QD=30.68;ReadPosRankSum=6.991;VQSLOD=4.5473;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,47:47:99:1463,129,0	1/1:0,6:6:18.05:203,18,0	0/0:29,0:29:75.21:0,75,941	0/0:31,0:31:84.18:0,84,1062	1/1:1,21:22:63.11:698,63,0	1/1:0,28:28:78.22:884,78,0	1/1:2,22:24:63.18:714,63,0	1/1:2,29:31:87.18:940,87,0	1/1:0,22:22:60.17:680,60,0	1/1:1,11:12:33.09:374,33,0	1/1:1,16:17:45.13:510,45,0	1/1:0,30:30:81.23:918,81,0	1/1:2,24:26:72.20:815,72,0	1/1:0,26:26:75.21:850,75,0	1/1:2,21:23:54.15:612,54,0	1/1:0,25:25:72.20:815,72,0	1/1:2,22:24:60.17:680,60,0	1/1:4,16:20:48.14:544,48,0	1/1:1,21:22:63.13:683,63,0	1/1:0,13:13:36.10:408,36,0	1/1:2,44:46:99:1429,126,0	1/1:0,23:23:66.15:734,66,0	1/1:1,13:14:36.10:405,36,0	1/1:0,22:22:60.17:681,60,0	1/1:0,22:22:66.19:749,66,0	1/1:0,23:23:66.19:749,66,0	1/1:2,21:23:51.14:578,51,0	1/1:0,4:4:12.03:136,12,0
chr10	7149613	.	AACTTCTGAGTGAGGC	A	14936.31	PASS	AB=0.533;AC=17;AF=0.304;AN=56;BaseQRankSum=16.075;DP=620;FS=5.331;HRun=0;HaplotypeScore=258.9428;InbreedingCoeff=0.9130;MQ=84.10;MQ0=0;MQRankSum=-14.768;QD=95.75;ReadPosRankSum=4.459;VQSLOD=3.9492;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,117,7856	0/0:8,0:8:24.08:0,24,1433	0/0:25,0:25:66.22:0,66,3721	0/0:21,0:21:60.17:0,60,3371	0/0:26,0:26:75.16:0,75,4544	0/0:20,0:20:54.18:0,54,3830	0/0:21,0:21:57.20:0,57,3910	0/0:39,0:39:99:0,117,7451	0/0:17,0:17:51.18:0,51,3246	0/0:21,0:21:63.22:0,63,4491	0/0:17,0:17:48.16:0,48,3502	1/1:3,22:25:47.87:2159,48,0	1/1:2,16:18:42.14:1889,42,0	1/1:2,13:15:30.10:1349,30,0	0/0:27,0:27:78.21:0,78,5397	0/0:24,0:24:69.22:0,69,4470	0/0:31,0:31:90.29:0,90,6361	0/0:19,0:19:57.20:0,57,3369	0/0:19,0:19:54.18:0,54,3389	0/0:26,0:26:72.22:0,72,4665	0/0:38,0:38:99:0,114,8013	1/1:4,14:18:33.11:1481,33,0	1/1:1,18:19:39.13:1754,39,0	1/1:2,10:12:18.06:810,18,0	0/0:25,0:25:75.26:0,75,5197	0/1:3,21:24:99:2254,0,364	1/1:0,18:18:51.18:2295,51,0	1/1:0,7:7:21.07:945,21,0
chr10	7150128	.	G	GA	26116.57	PASS	AB=0.914;AC=35;AF=0.625;AN=56;BaseQRankSum=-13.341;DP=959;FS=3.467;HRun=0;HaplotypeScore=109.2164;InbreedingCoeff=0.9238;MQ=84.49;MQ0=0;MQRankSum=-4.062;QD=42.19;ReadPosRankSum=1.339;VQSLOD=4.7283;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,36:36:99:1581,99,0	1/1:1,18:19:54.17:840,54,0	0/0:42,0:40:99:0,102,1402	0/0:35,0:31:71.10:0,71,1177	1/1:0,24:24:63.21:1000,63,0	1/1:2,19:21:60.20:957,60,0	1/1:0,43:43:99:1870,117,0	1/1:1,32:33:96.30:1480,96,0	1/1:0,38:38:99:1769,111,0	1/1:0,48:47:99:2293,144,0	1/1:0,19:19:51.17:815,51,0	0/0:49,0:49:99:0,147,2036	0/0:38,0:38:99:0,111,1549	0/0:32,0:32:96.32:0,96,1343	1/1:1,54:55:99:2494,157,0	1/1:5,39:44:99:1939,123,0	1/1:1,37:37:99:1774,111,0	1/1:1,28:30:84.76:1344,85,0	1/1:0,24:24:72.25:1136,72,0	1/1:0,29:29:78.27:1244,78,0	1/1:3,56:60:99:2379,151,0	0/0:31,0:31:93.30:0,93,1281	0/0:18,0:18:54.18:0,54,753	0/0:49,0:49:99:0,144,1984	1/1:1,25:26:72.25:1151,72,0	0/1:29,3:32:50.64:51,0,1065	0/0:30,0:28:90.30:0,90,1250	0/0:16,0:16:48.16:0,48,671
chr10	7150216	.	T	TGTAA	34684.23	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-16.523;DP=902;FS=3.331;HRun=0;HaplotypeScore=137.5815;InbreedingCoeff=0.9703;MQ=89.85;MQ0=0;MQRankSum=-7.859;QD=62.72;ReadPosRankSum=0.197;VQSLOD=6.5973;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,27:34:96.31:2343,96,0	1/1:1,9:10:30.09:737,30,0	0/0:37,0:37:73.72:0,74,1560	0/0:38,0:38:71.05:0,71,1471	1/1:5,13:21:54.05:1156,54,0	1/1:4,24:28:75.16:1720,75,0	1/1:8,27:39:66.05:1502,66,0	1/1:18,26:44:92.31:2460,92,0	1/1:9,32:46:99:3344,132,0	1/1:2,26:29:84.29:2198,84,0	1/1:3,13:17:45.15:1134,45,0	0/0:43,0:43:99:0,117,2102	0/0:31,0:31:93.30:0,93,1680	0/0:47,0:47:99:0,132,2387	1/1:12,34:52:99:3384,138,0	1/1:7,47:55:99:3416,135,0	1/1:5,24:33:89.51:2246,90,0	1/1:7,18:25:69.20:1670,69,0	1/1:6,9:18:48.16:1253,48,0	1/1:1,7:8:18.06:432,18,0	1/1:12,49:67:99:4001,160,0	0/0:23,0:23:57.18:0,57,1009	0/0:14,0:14:30.10:0,30,540	0/0:43,0:43:99:0,117,2112	1/1:0,21:23:66.23:1689,66,0	0/0:27,1:28:2.18:0,2,1355	0/0:33,0:32:93.31:0,93,1670	0/0:12,0:12:36.12:0,36,662
chr10	7153185	.	C	CT	5254.17	PASS	AC=50;AF=0.926;AN=54;BaseQRankSum=3.184;DP=269;FS=0.000;HRun=0;HaplotypeScore=100.5040;InbreedingCoeff=0.8352;MQ=49.59;MQ0=14;MQRankSum=-3.570;QD=21.45;ReadPosRankSum=2.772;VQSLOD=6.4726;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,22:22:48.10:489,48,0	1/1:2,3:5:11.96:113,12,0	0/0:11,0:7:21.05:0,21,275	0/0:11,0:9:27.06:0,27,342	1/1:0,8:8:12:118,12,0	1/1:2,9:11:32.92:297,33,0	1/1:5,11:15:42.01:403,42,0	1/1:7,6:7:20.98:196,21,0	1/1:2,5:7:18.04:193,18,0	1/1:5,5:10:30.01:314,30,0	1/1:3,5:8:8.51:67,9,0	1/1:1,10:10:21.05:221,21,0	1/1:0,9:9:21.03:203,21,0	1/1:1,5:6:15.03:149,15,0	1/1:3,5:8:17.92:155,18,0	1/1:1,2:3:9.02:97,9,0	1/1:4,6:9:23.76:203,24,0	1/1:6,4:8:21.02:216,21,0	1/1:5,1:5:14.69:140,15,0	1/1:8,6:13:15:141,15,0	1/1:3,2:4:9:78,9,0	1/1:2,8:10:26.89:235,27,0	1/1:4,4:8:12.75:98,13,0	1/1:1,10:11:19.26:202,19,0	1/1:5,6:11:32.95:301,33,0	1/1:4,6:10:26.97:269,27,0	1/1:0,12:12:36.07:356,36,0	./.
chr10	7153186	.	G	GGGA	7162.74	PASS	AC=50;AF=0.926;AN=54;BaseQRankSum=4.464;DP=265;FS=3.821;HRun=0;HaplotypeScore=101.4045;InbreedingCoeff=0.6883;MQ=46.96;MQ0=14;MQRankSum=-4.107;QD=29.60;ReadPosRankSum=3.338;VQSLOD=4.9452;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,16:22:48.11:786,48,0	1/1:2,3:5:12.04:210,12,0	0/0:10,0:6:18.06:0,18,307	0/0:11,0:9:24.08:0,24,396	1/1:3,5:8:12.01:164,12,0	1/1:2,9:11:27.08:435,27,0	1/1:5,11:15:35.60:546,36,0	1/1:8,6:8:9.02:160,9,0	1/1:2,5:7:17.27:267,17,0	1/1:4,5:9:19.84:297,20,0	1/1:0,5:8:9.03:141,9,0	1/1:4,6:9:21.04:327,21,0	1/1:2,7:9:6.09:290,6,0	1/1:1,5:6:15.05:254,15,0	1/1:3,5:8:12.04:203,12,0	1/1:1,2:3:6.02:102,6,0	1/1:5,5:9:20.09:288,20,0	1/1:6,4:8:9.35:205,9,0	1/1:3,1:4:9.03:134,9,0	1/1:8,6:13:14.64:215,15,0	1/1:2,2:3:3.01:48,3,0	1/1:2,8:10:21.06:330,21,0	1/1:0,4:8:15.05:230,15,0	1/1:1,10:11:22.71:294,23,0	1/1:5,6:11:18.04:279,18,0	1/1:4,6:10:23.74:345,24,0	1/1:0,12:12:36.12:612,36,0	./.
chr10	7153218	.	C	CTAT	2008.92	PASS	AB=0.857;AC=35;AF=0.875;AN=40;BaseQRankSum=2.176;DP=117;FS=2.117;HRun=0;HaplotypeScore=54.3407;InbreedingCoeff=0.2997;MQ=20.26;MQ0=56;MQRankSum=-2.450;QD=24.50;ReadPosRankSum=1.445;VQSLOD=3.1432;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,5:5:15.05:230,15,0	1/1:0,1:1:3.01:44,3,0	0/0:2,0:1:3.01:0,3,56	0/0:5,0:3:6.02:0,6,104	1/1:0,2:2:6.02:82,6,0	1/1:3,2:2:6.02:85,6,0	./.	./.	./.	./.	./.	1/1:1,2:2:6.02:83,6,0	1/1:1,2:2:6.02:85,6,0	1/1:0,3:3:9.03:125,9,0	1/1:3,2:2:6.02:82,6,0	1/1:1,1:1:3.01:42,3,0	1/1:4,4:5:6.11:180,6,0	0/1:5,1:2:0.68:51,0,1	1/1:2,2:2:6.02:98,6,0	1/1:1,1:1:3.01:43,3,0	./.	1/1:2,4:4:12.04:171,12,0	1/1:0,3:3:9.03:130,9,0	1/1:0,6:6:15.05:230,15,0	./.	1/1:3,1:2:6.02:88,6,0	1/1:2,5:6:18.06:262,18,0	./.
chr10	7153220	.	CGACT	C	1286.55	PASS	AB=0.771;AC=34;AF=0.850;AN=40;BaseQRankSum=1.631;DP=118;FS=2.445;HRun=0;HaplotypeScore=58.5725;InbreedingCoeff=0.1978;MQ=19.86;MQ0=59;MQRankSum=-2.146;QD=14.96;ReadPosRankSum=0.395;VQSLOD=3.1731;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,5:5:15.03:157,15,0	1/1:0,1:1:3.01:30,3,0	0/0:2,0:1:3.01:0,3,76	0/0:3,0:1:3.01:0,3,48	1/1:0,2:2:5.99:49,6,0	1/1:3,2:2:6.01:55,6,0	./.	./.	./.	./.	./.	1/1:2,2:2:6:53,6,0	1/1:1,2:2:6:53,6,0	1/1:0,3:3:9:79,9,0	1/1:3,2:2:6:53,6,0	1/1:1,1:1:3:28,3,0	0/1:4,4:5:0.36:118,0,0	0/1:6,1:2:30.60:36,0,31	1/1:4,2:2:6.02:69,6,0	1/1:1,1:1:3:29,3,0	./.	1/1:2,4:4:12.01:108,12,0	1/1:0,3:3:9.01:83,9,0	1/1:0,6:6:15.03:159,15,0	./.	1/1:3,1:2:6.01:60,6,0	1/1:2,5:6:18.01:175,18,0	./.
chr10	7153881	.	A	ACTCTCTGT	11666.01	PASS	AC=46;AF=0.885;AN=52;BaseQRankSum=-3.422;DP=306;FS=7.869;HRun=0;HaplotypeScore=83.0134;InbreedingCoeff=0.4949;MQ=72.48;MQ0=2;MQRankSum=-3.432;QD=47.42;ReadPosRankSum=2.096;VQSLOD=3.9691;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:2,0:7:7.26:0,7,138	./.	0/0:20,0:14:0.10:0,0,74	0/0:21,0:16:3.76:0,4,160	1/1:4,7:14:18.95:749,19,0	1/1:8,7:16:21.07:874,21,0	1/1:1,2:5:6.02:248,6,0	1/1:20,0:20:3:25,3,0	1/1:4,5:10:12.04:499,12,0	1/1:3,3:8:12.01:395,12,0	1/1:4,6:10:17.98:646,18,0	1/1:5,1:6:12.03:394,12,0	1/1:0,4:4:6.02:249,6,0	1/1:4,4:6:3.90:126,4,0	1/1:2,8:12:18.06:748,18,0	1/1:6,7:14:15.94:626,16,0	1/1:2,4:6:9.03:375,9,0	1/1:6,2:6:9.03:375,9,0	1/1:5,2:9:14.30:240,14,0	1/1:9,4:13:18.06:720,18,0	./.	1/1:1,5:9:12.51:500,13,0	1/1:7,0:7:6.01:73,6,0	1/1:4,4:8:3.01:125,3,0	1/1:3,10:16:24.08:998,24,0	1/1:8,8:14:33.11:1308,33,0	1/1:4,7:12:12.04:499,12,0	1/1:2,9:11:21.07:874,21,0
chr10	7154077	.	GC	G	2980.26	PASS	AB=0.938;AC=33;AF=0.589;AN=56;BaseQRankSum=-5.246;DP=424;FS=3.062;HRun=2;HaplotypeScore=49.6563;InbreedingCoeff=0.7711;MQ=50.98;MQ0=33;MQRankSum=-0.879;QD=11.97;ReadPosRankSum=-0.301;VQSLOD=1.9209;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:24:38.47:0,38,239	1/1:2,9:11:11.83:100,12,0	0/0:25,0:7:11.09:0,11,83	0/0:32,0:4:1.66:0,2,6	1/1:1,17:18:15.03:168,15,0	1/1:1,11:12:17.96:184,18,0	1/1:4,12:13:3.44:63,3,0	1/1:27,10:22:59.46:524,59,0	1/1:4,9:11:18.03:183,18,0	1/1:9,6:14:34.94:324,35,0	1/1:1,6:7:9.03:108,9,0	0/0:6,0:4:3.01:0,3,33	0/0:9,0:4:7.82:0,8,71	0/0:11,0:6:12.02:0,12,124	1/1:5,3:6:14.96:143,15,0	1/1:9,4:10:16.79:159,17,0	1/1:2,15:16:27.07:296,27,0	1/1:7,5:9:17.85:201,18,0	1/1:13,3:13:29.77:240,30,0	1/1:2,11:13:21.05:238,21,0	1/1:6,1:6:11.90:101,12,0	0/0:9,0:8:14.94:0,15,154	0/0:15,0:14:18.13:0,18,188	0/0:23,0:19:24.07:0,24,278	1/1:0,19:19:12.03:134,12,0	0/1:14,1:8:19:19,0,108	0/0:13,0:7:11.98:0,12,108	0/0:7,0:5:4.49:0,4,22
chr10	7154078	.	CCT	C	1976	PASS	AB=0.974;AC=31;AF=0.554;AN=56;BaseQRankSum=0.843;DP=445;FS=2.722;HRun=0;HaplotypeScore=57.7697;InbreedingCoeff=0.5290;MQ=50.47;MQ0=33;MQRankSum=1.023;QD=6.96;ReadPosRankSum=3.644;VQSLOD=2.9418;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:24,1:24:5.55:6,0,48	1/1:10,1:11:11.06:94,11,0	0/0:28,0:7:13.73:0,14,123	0/0:33,0:4:7.06:0,7,34	1/1:17,1:18:14.92:129,15,0	1/1:12,0:12:3.41:82,3,0	0/1:15,0:12:9.24:24,0,9	1/1:37,0:22:44.93:390,45,0	1/1:12,1:11:3.51:106,4,0	1/1:15,1:15:16.51:224,17,0	1/1:8,0:8:8.82:82,9,0	0/0:6,0:4:3:0,3,44	0/0:9,0:4:11.91:0,12,130	0/0:11,0:6:12.03:0,12,162	1/1:9,0:7:3.51:76,4,0	0/1:13,0:10:1.66:66,0,2	1/1:18,0:17:18.38:173,18,0	1/1:12,0:10:2.06:123,2,0	1/1:14,2:13:22.30:227,22,0	1/1:12,1:13:7.43:190,7,0	0/1:9,1:9:6.19:75,0,6	0/0:9,0:8:14.96:0,15,196	0/0:18,0:17:25.01:0,25,273	0/0:23,0:19:24.08:0,24,363	1/1:20,0:20:11.84:94,12,0	0/1:17,0:10:8.21:8,0,159	0/0:16,0:10:23.05:0,23,183	0/0:8,0:6:8.91:0,9,43
chr10	7154739	.	C	CGTGTGTGTGTGTGT	4185.44	PASS	AB=0.600;AC=29;AF=0.518;AN=56;BaseQRankSum=-6.016;DP=586;FS=1.315;HRun=0;HaplotypeScore=231.4069;InbreedingCoeff=0.8488;MQ=68.59;MQ0=9;MQRankSum=0.969;QD=15.00;ReadPosRankSum=-4.726;VQSLOD=1.8018;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:59,0:55:64.12:0,64,2542	1/1:6,0:6:11.99:128,12,0	0/0:17,0:8:6.53:0,7,147	0/0:24,0:16:15.14:0,15,168	1/1:12,0:12:19.02:182,19,0	1/1:18,0:19:35.76:458,36,0	1/1:22,0:22:19.35:182,19,0	1/1:30,0:29:9.42:319,9,0	1/1:2,0:23:2.49:274,2,0	1/1:15,0:15:17.53:244,18,0	1/1:8,0:8:17.91:182,18,0	0/0:35,0:35:30.45:0,30,1112	0/0:20,0:20:50.81:0,51,1014	0/0:17,0:17:30.18:0,30,495	1/1:25,0:26:20.78:328,21,0	0/1:6,0:18:0.56:518,0,1	1/1:1,14:18:2.98:201,3,0	1/1:12,0:12:21.05:278,21,0	1/1:24,0:24:34.33:414,34,0	0/0:4,0:15:3.66:0,4,12	1/1:31,0:31:30.94:367,31,0	0/0:12,0:12:29.30:0,29,358	0/0:16,0:16:30.05:0,30,776	0/0:30,0:30:69.43:0,69,1518	1/1:15,0:15:7.95:110,8,0	0/0:26,0:26:40.01:0,40,1409	0/0:24,0:24:60.02:0,60,1182	0/0:12,0:12:21:0,21,224
chr10	7154740	.	A	ATG	3046.13	PASS	AB=0.993;AC=40;AF=0.714;AN=56;BaseQRankSum=-3.655;DP=677;FS=4.877;HRun=0;HaplotypeScore=181.8055;InbreedingCoeff=0.3212;MQ=64.35;MQ0=9;MQRankSum=1.399;QD=5.09;ReadPosRankSum=-0.310;VQSLOD=3.0628;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:54:27.71:28,0,166	0/1:12,0:12:6.93:10,0,7	0/1:17,0:8:0:0,0,0	0/1:24,0:16:0:0,0,0	1/1:13,0:13:2.82:44,3,0	1/1:24,0:24:11.78:98,12,0	0/1:30,0:30:0.91:50,0,1	1/1:35,0:34:12.91:71,13,0	1/1:26,0:26:6:52,6,0	1/1:24,0:24:16.38:225,16,0	1/1:11,0:11:4.68:31,5,0	1/1:29,7:36:28.03:614,28,0	1/1:8,13:23:6.48:421,6,0	1/1:16,3:19:4.45:98,4,0	1/1:35,0:34:5.99:70,6,0	1/1:25,0:25:11.99:103,12,0	1/1:21,0:20:11.93:116,12,0	0/1:15,0:15:0.14:93,0,0	0/1:27,0:27:13.35:21,0,13	0/0:18,0:18:0.47:0,0,1	1/1:39,0:39:12.01:121,12,0	1/1:4,6:11:12.04:180,12,0	0/1:16,1:17:3.10:3,0,103	1/1:11,23:35:48.16:719,48,0	1/1:21,0:20:2.89:25,3,0	0/0:12,0:25:34.82:0,35,244	0/0:11,0:24:40.08:0,40,218	0/0:6,0:12:5.68:0,6,28
chr10	7154774	.	GTA	G	1203.10	PASS	AB=0.998;AC=16;AF=0.286;AN=56;BaseQRankSum=1.843;DP=672;FS=1.428;HRun=0;HaplotypeScore=150.0404;InbreedingCoeff=0.0383;MQ=52.52;MQ0=7;MQRankSum=2.505;QD=3.55;ReadPosRankSum=-2.405;VQSLOD=2.7112;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:51,1:47:85.99:86,0,338	0/0:9,0:9:8.74:0,9,54	0/0:20,0:12:14.02:0,14,254	0/0:32,0:21:46.65:0,47,503	0/0:17,0:17:32.49:0,32,260	0/1:28,0:28:31.19:31,0,227	0/0:28,0:28:14.71:0,15,240	0/0:36,0:35:3.49:0,3,513	0/0:28,0:28:38.87:0,39,325	0/0:22,0:22:20.92:0,21,606	0/1:11,0:11:14.62:15,0,81	1/1:35,2:37:0.10:384,0,0	0/1:27,0:27:14.15:135,0,14	1/1:23,0:23:19.66:321,20,0	0/0:28,0:27:36.30:0,36,305	0/0:20,0:20:24.02:0,24,244	0/0:19,0:18:32.86:0,33,266	0/1:15,0:15:51.18:51,0,133	0/0:12,0:12:1.58:0,2,129	0/0:18,0:18:14.84:0,15,123	0/1:30,0:30:17:17,0,224	1/1:13,2:15:7.70:69,8,0	0/1:18,0:18:66.19:66,0,92	0/1:38,0:38:6.40:174,0,6	0/1:20,0:18:4.55:5,0,169	0/0:35,0:35:70.52:0,71,678	0/1:25,0:25:6.34:6,0,159	0/0:9,0:9:5.80:0,6,33
chr10	7155180	.	C	CGTAT	3710.65	PASS	AB=1.000;AC=36;AF=0.692;AN=52;BaseQRankSum=-7.175;DP=718;FS=0.000;HRun=0;HaplotypeScore=191.1576;InbreedingCoeff=0.2723;MQ=60.17;MQ0=8;MQRankSum=-1.353;QD=6.24;ReadPosRankSum=-7.405;VQSLOD=0.0888;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:19,17:38:30.10:704,30,0	0/1:12,0:12:0:0,0,0	./.	./.	1/1:36,0:36:14.75:211,15,0	0/1:19,0:19:0.04:0,0,0	1/1:18,0:17:5.99:50,6,0	1/1:31,0:31:30.95:208,31,0	1/1:25,0:26:9.12:70,9,0	1/1:31,0:31:24.21:269,24,0	0/0:22,0:22:0.59:0,1,1	0/0:23,0:23:19.99:0,20,366	0/0:31,0:31:17.99:0,18,458	0/1:27,0:27:6.94:7,0,290	1/1:31,0:31:4.53:30,5,0	1/1:35,0:35:6:76,6,0	1/1:26,1:27:24.07:515,24,0	1/1:15,0:15:8.97:87,9,0	1/1:23,0:18:17.99:198,18,0	1/1:35,0:35:42.13:936,42,0	1/1:12,20:34:6.02:128,6,0	0/0:18,0:18:8.01:0,8,251	0/1:25,0:25:47.95:48,0,317	0/1:15,0:15:23.99:24,0,141	1/1:29,0:30:7.96:39,8,0	0/1:32,0:32:67.05:67,0,208	0/1:28,0:28:9.95:10,0,270	0/1:27,0:27:34.08:34,0,375
chr10	7158670	.	AC	A	6770.26	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=15.092;DP=762;FS=2.732;HRun=1;HaplotypeScore=71.1107;InbreedingCoeff=0.9996;MQ=83.41;MQ0=0;MQRankSum=-6.740;QD=40.30;ReadPosRankSum=2.955;VQSLOD=5.5963;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,117,1812	0/0:9,0:9:24.08:0,24,384	0/0:21,0:21:60.16:0,60,910	0/0:24,0:24:72.21:0,72,1090	0/0:28,0:28:84.27:0,84,1315	0/0:26,0:26:78.27:0,78,1242	0/0:34,0:34:99:0,102,1560	0/0:40,0:40:99:0,117,1796	0/0:30,0:30:90.29:0,90,1411	0/0:31,0:31:87.27:0,87,1329	0/0:12,0:12:36.12:0,36,575	1/1:0,34:34:96.32:1341,96,0	1/1:1,35:36:99:1445,105,0	1/1:0,29:29:87.29:1216,87,0	0/0:31,0:31:90.27:0,90,1411	0/0:30,0:30:87.30:0,87,1386	0/0:33,0:33:99:0,99,1549	0/0:22,0:22:66.23:0,66,1055	0/0:24,0:24:69.19:0,69,1070	0/0:21,0:21:60.20:0,60,956	0/0:51,0:51:99:0,150,2331	1/1:0,26:26:78.26:1090,78,0	1/1:0,22:22:63.21:881,63,0	1/1:0,21:21:57.19:797,57,0	0/0:18,0:18:54.18:0,54,861	0/0:27,0:27:75.25:0,75,1175	0/0:24,0:24:72.25:0,72,1150	0/0:19,0:19:57.19:0,57,899
chr10	7160190	.	A	AT	588.13	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-4.849;DP=267;FS=0.000;HRun=0;HaplotypeScore=52.3934;InbreedingCoeff=0.7745;MQ=72.27;MQ0=3;MQRankSum=-0.823;QD=34.60;ReadPosRankSum=2.966;VQSLOD=3.1707;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:32.55:0,33,411	0/0:5,0:5:8.98:0,9,103	0/0:21,0:13:34.54:0,35,350	0/0:19,0:11:20.64:0,21,254	0/0:4,0:4:3.01:0,3,41	0/0:8,0:8:18.06:0,18,250	0/0:15,0:15:33.10:0,33,444	0/0:13,0:13:30.10:0,30,418	0/0:6,0:6:18.06:0,18,243	0/0:8,0:8:24.08:0,24,335	0/0:5,0:5:15.05:0,15,210	0/0:8,0:8:21.07:0,21,294	0/0:10,0:10:24.08:0,24,335	0/0:11,0:11:24.08:0,24,335	0/0:10,0:10:21.07:0,21,285	0/0:8,0:8:18.06:0,18,250	0/0:15,0:15:36.09:0,36,483	0/0:11,0:11:33.11:0,33,460	0/0:3,0:3:9.03:0,9,125	0/0:2,0:2:6.02:0,6,84	0/0:12,0:12:24.08:0,24,332	0/0:9,0:9:21.07:0,21,293	0/0:11,0:11:18.05:0,18,233	0/0:11,0:11:24.06:0,24,317	0/0:6,0:6:12.02:0,12,148	1/1:0,6:6:18.06:286,18,0	1/1:0,10:10:24.08:383,24,0	1/1:0,1:1:3.01:48,3,0
chr10	7161249	.	A	AAG	32088.30	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-10.060;DP=709;FS=4.590;HRun=0;HaplotypeScore=75.9800;InbreedingCoeff=0.9860;MQ=76.42;MQ0=0;MQRankSum=-9.773;QD=49.44;ReadPosRankSum=7.205;VQSLOD=5.9805;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,49:51:99:2678,144,0	1/1:0,5:5:15.05:281,15,0	0/0:32,0:31:78.22:0,78,1033	0/0:28,0:22:44.52:0,45,627	1/1:3,18:21:51.14:955,51,0	1/1:1,13:14:36.12:674,36,0	1/1:1,27:28:78.27:1461,78,0	1/1:4,33:37:99:1812,99,0	1/1:1,21:23:60.21:1123,60,0	1/1:3,25:28:75.24:1328,75,0	1/1:0,8:9:24.08:450,24,0	1/1:1,38:39:99:1852,99,0	1/1:0,27:27:75.26:1405,75,0	1/1:2,31:33:90.31:1669,90,0	1/1:1,22:23:60.21:1124,60,0	1/1:0,33:33:93.32:1742,93,0	1/1:5,26:32:66.23:1229,66,0	1/1:1,33:34:90.31:1686,90,0	1/1:4,11:17:20.33:612,20,0	1/1:0,17:17:48.16:899,48,0	1/1:2,44:46:99:2397,129,0	1/1:0,8:9:21.07:393,21,0	1/1:3,12:15:33.11:617,33,0	1/1:0,38:38:99:2079,111,0	1/1:0,15:15:45.15:843,45,0	1/1:2,17:19:54.19:1009,54,0	1/1:2,20:23:63.22:1154,63,0	1/1:0,13:13:33.11:618,33,0
chr10	7161841	.	ATGTGTGTCTGTG	A	2859.85	PASS	AB=0.898;AC=6;AF=0.107;AN=56;BaseQRankSum=3.639;DP=1178;FS=5.790;HRun=0;HaplotypeScore=418.9397;InbreedingCoeff=0.5453;MQ=51.07;MQ0=18;MQRankSum=-6.399;QD=24.87;ReadPosRankSum=-1.033;VQSLOD=1.0611;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:43:78.23:0,78,3683	0/0:11,0:11:9.03:0,9,310	0/0:56,0:22:30.07:0,30,814	0/0:56,0:26:37.01:0,37,1140	0/0:37,0:35:38.23:0,38,1862	0/0:23,0:21:39.12:0,39,1600	0/0:39,0:39:69.23:0,69,3278	0/0:53,0:50:93.31:0,93,2976	0/0:35,0:34:60.18:0,60,3131	0/0:75,0:75:85.81:0,86,5398	0/0:23,0:21:26.46:0,26,1489	0/0:39,0:39:56.67:0,57,2398	0/0:35,0:35:85.17:0,85,4069	0/0:50,0:50:78.39:0,78,3056	0/0:52,0:51:99:0,117,5529	0/0:47,0:47:72.25:0,72,3390	0/0:41,0:40:60.93:0,61,3426	0/1:40,0:39:38.71:39,0,3789	0/0:25,0:18:39.12:0,39,1515	0/0:45,0:44:34.73:0,35,1831	0/0:129,0:127:99:0,231,10818	0/0:41,0:41:75.26:0,75,3286	0/0:24,0:24:27.09:0,27,1002	0/0:53,0:53:99:0,102,5259	0/0:30,0:28:30.10:0,30,1443	0/1:32,11:42:99:1778,0,185	1/1:9,14:23:39.12:1050,39,0	1/1:7,2:9:4.43:121,4,0
chr10	7161881	.	A	ATG	18756.81	PASS	AB=0.982;AC=36;AF=0.643;AN=56;BaseQRankSum=-2.792;DP=1260;FS=2.265;HRun=0;HaplotypeScore=219.7850;InbreedingCoeff=0.6118;MQ=46.11;MQ0=42;MQRankSum=3.008;QD=20.59;ReadPosRankSum=-1.468;VQSLOD=4.8797;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:27.89:0,28,286	0/1:11,0:11:21.21:185,0,21	0/1:65,0:5:0.82:1,0,34	0/0:76,0:11:18.48:0,18,204	1/1:31,5:34:42.13:655,42,0	1/1:16,3:17:30.10:503,30,0	0/1:45,1:45:1.78:897,0,2	1/1:43,29:54:52.84:1464,53,0	1/1:44,3:46:75.14:1103,75,0	0/1:67,7:74:32.77:1350,0,33	0/1:28,0:26:11.17:542,0,11	0/0:54,0:54:42.85:0,43,496	0/0:46,0:46:53.02:0,53,463	0/0:45,0:44:55.96:0,56,468	1/1:47,6:52:65.23:1027,65,0	1/1:43,2:45:72.20:1133,72,0	1/1:32,3:34:67.89:1169,68,0	1/1:33,3:35:42.10:1285,42,0	1/1:24,2:21:32.76:678,33,0	1/1:37,5:41:10.68:658,11,0	1/1:114,22:133:99:3484,201,0	0/1:35,0:35:4.77:5,0,196	0/0:23,0:23:26.62:0,27,171	0/0:66,0:66:43.62:0,44,514	1/1:40,2:40:21.89:569,22,0	1/1:11,22:33:81.13:1223,81,0	1/1:4,20:24:45.06:692,45,0	1/1:2,2:4:9.03:135,9,0
chr10	7161900	.	TGC	T	3946.50	PASS	AB=0.992;AC=19;AF=0.339;AN=56;BaseQRankSum=8.416;DP=1340;FS=23.997;HRun=0;HaplotypeScore=268.9441;InbreedingCoeff=-0.0519;MQ=44.57;MQ0=59;MQRankSum=4.897;QD=5.00;ReadPosRankSum=3.466;VQSLOD=1.6676;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:45:80.69:0,81,1085	0/1:13,0:13:63.85:85,0,64	0/0:72,0:5:8.14:0,8,160	0/0:76,0:15:28.19:0,28,400	1/1:32,0:30:10.47:196,10,0	0/1:23,0:21:19.67:150,0,20	0/1:40,1:40:99:205,0,138	0/1:116,0:80:99:219,0,1203	1/1:45,0:44:17.26:273,17,0	0/1:75,1:76:99:416,0,262	0/1:25,0:23:80.58:81,0,98	0/0:65,0:65:99:0,130,1934	0/0:48,0:48:86.65:0,87,1635	0/0:48,0:48:71.15:0,71,1451	1/1:50,0:49:11.61:294,12,0	0/1:40,1:41:33.02:236,0,33	0/1:33,0:32:8.23:232,0,8	0/1:39,1:39:23.25:324,0,23	0/1:22,0:14:28.14:139,0,28	0/1:43,0:42:99:139,0,103	0/1:148,0:143:41.34:790,0,41	0/0:32,0:32:42.03:0,42,673	0/0:26,0:26:29.45:0,29,492	0/0:58,0:59:99:0,102,1722	0/1:41,1:40:12.77:171,0,13	0/0:38,0:37:97.76:0,98,1714	0/0:25,0:25:38.66:0,39,610	0/0:12,0:12:5.09:0,5,307
chr10	7161902	.	CGT	C	11355.35	PASS	AB=0.895;AC=24;AF=0.429;AN=56;BaseQRankSum=2.586;DP=1338;FS=21.075;HRun=0;HaplotypeScore=241.3039;InbreedingCoeff=0.4399;MQ=44.52;MQ0=57;MQRankSum=5.230;QD=14.36;ReadPosRankSum=1.017;VQSLOD=3.4442;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:43:72.14:0,72,782	0/1:13,0:13:62.01:203,0,62	0/0:73,0:5:11.82:0,12,115	0/0:75,0:15:34.67:0,35,405	1/1:27,4:29:42.12:507,42,0	1/1:21,2:21:33.10:417,33,0	0/1:35,4:40:99:601,0,140	0/1:85,30:80:99:762,0,805	1/1:41,5:45:60.12:710,60,0	0/1:72,5:80:99:1017,0,241	0/1:21,3:22:80.36:232,0,80	0/0:66,0:66:99:0,135,2036	0/0:47,1:49:84.01:0,84,1726	0/0:47,0:48:81.06:0,81,1450	1/1:40,11:50:66.15:806,66,0	1/1:36,5:41:26.40:674,26,0	1/1:30,4:33:25.02:722,25,0	1/1:33,5:37:19.08:931,19,0	0/1:19,4:14:4.39:383,0,4	0/1:38,3:40:37.23:371,0,37	1/1:131,15:142:99:2611,213,0	0/0:30,0:30:39.12:0,39,611	0/0:25,0:25:30.08:0,30,455	0/0:56,1:58:96.31:0,96,1567	0/1:35,8:41:8.85:409,0,9	0/0:39,0:39:99:0,110,1671	0/0:23,0:23:38.71:0,39,585	0/0:12,0:12:18.06:0,18,290
chr10	7161923	.	GTA	G	805.12	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-0.806;DP=1426;FS=3.750;HRun=0;HaplotypeScore=272.3610;InbreedingCoeff=0.9804;MQ=44.57;MQ0=61;MQRankSum=2.992;QD=15.79;ReadPosRankSum=2.347;VQSLOD=2.9725;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,45:47:63.21:900,63,0	0/0:16,0:16:30.97:0,31,422	0/0:65,0:6:14.97:0,15,213	0/0:67,0:12:29.18:0,29,467	0/0:30,0:29:45.10:0,45,550	0/0:18,0:18:36.06:0,36,385	0/0:44,0:42:71.40:0,71,782	0/0:116,0:81:99:0,189,2500	0/0:55,0:54:73.26:0,73,833	0/0:83,0:82:99:0,146,2252	0/0:20,0:20:30.05:0,30,390	0/0:74,0:74:99:0,147,2598	0/0:63,0:63:99:0,152,2304	0/0:54,0:54:99:0,117,1775	0/0:57,0:57:84.08:0,84,1040	0/0:51,0:51:62.05:0,62,900	0/0:34,0:33:80.48:0,80,907	0/0:38,0:37:99:0,102,1306	0/0:25,0:14:36.08:0,36,495	0/0:51,0:51:54.08:0,54,693	0/0:143,0:138:99:0,261,3262	0/0:40,0:40:44.20:0,44,651	0/0:32,0:32:41.07:0,41,510	0/0:61,0:61:90.22:0,90,1490	0/0:43,0:43:51.12:0,51,666	0/0:55,1:54:99:0,126,2372	0/0:25,0:25:57:0,57,922	0/0:13,0:13:24.08:0,24,417
chr10	7162060	.	T	TGTGA	189.13	PASS	AB=0.956;AC=9;AF=0.161;AN=56;BaseQRankSum=8.110;DP=1257;FS=36.802;HRun=0;HaplotypeScore=306.4289;InbreedingCoeff=-0.0423;MQ=37.65;MQ0=17;MQRankSum=-6.262;QD=0.50;ReadPosRankSum=-7.417;VQSLOD=-0.1531;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:45.48:0,45,896	0/0:17,0:17:5.91:0,6,114	0/0:47,0:16:36.79:0,37,642	0/0:54,0:12:30.05:0,30,485	0/0:28,2:29:12.04:0,12,219	1/1:12,0:11:2.98:22,3,0	0/1:34,2:36:20.30:20,0,62	0/0:66,0:60:99:0,121,1965	0/0:41,1:42:3.08:0,3,81	0/1:90,5:92:81.47:81,0,3120	0/0:43,0:40:5.86:0,6,113	0/0:57,1:58:37.31:0,37,737	0/0:50,2:52:1.26:0,1,986	0/0:55,1:55:14.80:0,15,277	0/1:42,1:42:5.91:6,0,320	0/0:39,2:41:14.86:0,15,285	0/0:20,0:20:12.20:0,12,280	0/0:29,0:28:29.99:0,30,449	0/0:19,0:14:39.09:0,39,635	0/1:37,0:34:7.47:7,0,295	0/0:73,1:68:30.03:0,30,514	0/0:55,1:56:28.17:0,28,556	0/0:36,1:37:27.08:0,27,460	0/0:72,0:72:34.33:0,34,679	0/1:38,2:39:44.86:53,0,45	0/1:84,1:86:27.22:27,0,3531	0/1:28,4:32:99:103,0,752	0/0:15,0:15:36.21:0,36,703
chr10	7162067	.	GTGTGTGTGCA	G	6883.05	PASS	AB=0.872;AC=33;AF=0.589;AN=56;BaseQRankSum=2.496;DP=1220;FS=18.174;HRun=0;HaplotypeScore=318.0709;InbreedingCoeff=0.1917;MQ=37.06;MQ0=20;MQRankSum=-5.136;QD=7.46;ReadPosRankSum=-4.588;VQSLOD=1.8388;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:47,0:47:3.57:4,0,964	1/1:12,5:17:5.40:98,5,0	0/0:49,0:15:36.02:0,36,670	0/0:57,0:14:39.13:0,39,913	1/1:27,7:33:9.02:125,9,0	0/1:2,9:10:0.41:0,0,0	0/1:22,6:28:1.46:16,0,1	0/1:30,34:58:99:1353,0,153	1/1:17,25:42:3.47:96,3,0	1/1:64,26:88:99:3638,132,0	0/0:15,24:37:0.47:0,0,1	0/1:57,0:57:11.28:11,0,383	0/0:52,0:52:36.07:0,36,1403	0/1:50,0:49:11.70:12,0,305	1/1:30,14:43:8.98:147,9,0	1/1:30,13:43:13.90:215,14,0	1/1:9,11:20:10.23:134,10,0	0/1:7,18:24:5.49:199,0,5	1/1:12,2:11:18.06:427,18,0	1/1:25,12:34:9.50:143,10,0	1/1:23,39:56:0.32:0,0,0	0/1:56,0:56:6.29:6,0,622	0/1:34,0:35:21.92:22,0,485	0/0:65,0:66:35.14:0,35,1020	1/1:24,15:38:5.80:13,6,0	0/1:90,1:91:99:217,0,5504	0/0:34,0:34:3.78:0,4,1444	0/1:17,0:17:8.11:8,0,1147
chr10	7162069	.	GTGTGTGCA	G	3707.85	PASS	AB=0.979;AC=27;AF=0.482;AN=56;BaseQRankSum=7.582;DP=1210;FS=28.185;HRun=0;HaplotypeScore=307.4635;InbreedingCoeff=0.4920;MQ=36.03;MQ0=22;MQRankSum=-5.876;QD=6.03;ReadPosRankSum=-5.487;VQSLOD=0.4128;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:23.52:0,24,782	1/1:16,1:17:4.05:34,4,0	0/0:50,0:14:36.09:0,36,758	0/0:58,0:14:42.14:0,42,1118	1/1:32,2:33:8.49:49,8,0	1/1:12,0:11:5.68:38,6,0	0/1:29,0:29:10.53:13,0,11	0/1:63,0:57:99:368,0,178	1/1:41,0:41:10.82:88,11,0	0/1:84,4:86:47.03:1760,0,47	0/0:32,5:35:0.47:0,0,1	0/0:50,0:50:12.38:0,12,302	0/0:52,0:52:47.14:0,47,1164	0/0:47,1:47:6.82:0,7,236	1/1:42,0:41:13.69:66,14,0	1/1:44,0:44:11.14:79,11,0	1/1:21,0:21:6.35:51,6,0	1/1:24,0:23:11.01:140,11,0	1/1:13,0:10:15.62:205,16,0	1/1:32,7:36:12.09:48,12,0	0/0:57,4:54:2.38:0,2,6	0/0:48,7:55:10.04:0,10,475	0/0:33,1:34:15.52:0,16,383	0/0:67,0:67:35.73:0,36,851	1/1:38,2:39:10.81:38,11,0	0/1:85,6:91:99:624,0,5910	0/0:35,0:35:47.72:0,48,1650	0/1:17,0:17:99:109,0,1079
chr10	7162072	.	TGTG	T	249.15	PASS	AB=0.993;AC=12;AF=0.214;AN=56;BaseQRankSum=8.474;DP=1188;FS=70.280;HRun=0;HaplotypeScore=276.8058;InbreedingCoeff=0.2473;MQ=35.63;MQ0=21;MQRankSum=-6.584;QD=0.76;ReadPosRankSum=1.084;VQSLOD=-0.4079;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:48.60:0,49,1016	0/0:17,0:17:6.01:0,6,65	0/0:52,0:15:42.10:0,42,880	0/0:59,0:16:48.16:0,48,1007	0/0:33,0:32:9.02:0,9,103	1/1:12,0:11:2.92:17,3,0	0/1:30,0:30:12.74:13,0,85	0/0:57,0:51:84.54:0,85,1161	1/1:41,0:41:9.26:41,9,0	0/1:90,0:88:99:191,0,1630	0/0:38,0:36:0.47:0,0,1	0/0:45,0:45:34.11:0,34,664	0/0:51,0:51:60.99:0,61,1291	0/0:47,0:47:14.97:0,15,299	0/1:40,0:39:11.28:11,0,67	0/0:44,0:44:4.37:0,4,140	0/0:21,0:21:8.15:0,8,217	0/1:23,1:23:46.08:46,0,82	0/1:14,0:11:30.95:31,0,161	0/1:36,0:34:6.41:6,0,140	0/0:57,0:50:9.13:0,9,101	0/0:54,0:54:29.27:0,29,583	0/0:33,0:33:20.99:0,21,424	0/0:61,3:65:37.27:0,37,824	1/1:40,0:39:7.87:41,8,0	0/0:90,0:90:99:0,165,4885	0/0:35,0:35:60.48:0,60,1259	0/0:16,0:16:42.34:0,42,904
chr10	7162075	.	GCA	G	2352.42	PASS	AB=0.941;AC=33;AF=0.589;AN=56;BaseQRankSum=7.343;DP=1140;FS=42.472;HRun=0;HaplotypeScore=253.9951;InbreedingCoeff=0.1698;MQ=35.29;MQ0=20;MQRankSum=-4.557;QD=2.96;ReadPosRankSum=-6.459;VQSLOD=-0.2137;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:42,2:44:30.10:72,0,30	1/1:16,1:17:3.45:27,3,0	0/0:47,0:14:42.04:0,42,706	0/0:58,1:16:48.16:0,48,818	1/1:29,1:29:4.35:27,4,0	1/1:11,1:11:6:53,6,0	0/1:23,5:28:9.33:39,0,9	0/1:48,5:47:99:274,0,154	1/1:35,6:41:12.08:82,12,0	0/1:86,2:86:99:893,0,143	0/0:35,2:35:0:0,0,0	0/1:39,3:42:32.51:33,0,49	0/0:51,0:51:18.95:0,19,125	0/1:45,1:45:7.87:38,0,8	1/1:38,2:39:14.92:114,15,0	1/1:43,1:44:15.30:142,15,0	1/1:15,3:18:0.93:53,1,0	1/1:20,3:22:13.40:71,13,0	1/1:11,2:10:17.19:104,17,0	1/1:29,5:33:14.89:110,15,0	1/1:50,2:45:1.09:3,1,0	0/0:49,2:51:1.58:0,2,43	0/1:30,2:32:23.21:25,0,23	0/0:55,9:64:25:0,25,130	1/1:24,12:35:12.26:67,12,0	0/1:78,8:86:99:190,0,3275	0/0:34,0:34:33.67:0,34,864	0/1:16,0:16:99:110,0,545
chr10	7162076	.	C	CGT	2856.64	PASS	AB=0.963;AC=30;AF=0.536;AN=56;BaseQRankSum=4.507;DP=1136;FS=60.611;HRun=0;HaplotypeScore=255.2540;InbreedingCoeff=0.2390;MQ=35.18;MQ0=20;MQRankSum=1.754;QD=3.31;ReadPosRankSum=2.237;VQSLOD=1.0843;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:20,24:44:34.10:561,34,0	0/0:17,0:17:2.91:0,3,19	0/0:47,0:13:36.04:0,36,472	0/0:60,0:16:48.13:0,48,691	0/0:28,0:27:5.91:0,6,38	1/1:12,0:11:4.63:16,5,0	0/1:28,0:28:5.51:6,0,39	0/1:56,0:50:38.04:38,0,492	1/1:41,0:41:5.07:21,5,0	0/1:87,0:85:91.33:91,0,583	0/1:37,0:35:0:0,0,0	1/1:27,15:42:15.01:224,15,0	1/1:12,36:49:18.92:751,19,0	1/1:19,25:45:11.88:176,12,0	0/0:39,0:38:1.27:0,1,30	0/1:45,0:45:18.98:19,0,27	0/1:18,0:18:9.47:9,0,12	0/1:22,0:22:5.42:23,0,5	0/0:13,0:10:5.91:0,6,66	0/0:35,0:34:4.07:0,4,49	1/1:52,0:45:2.68:11,3,0	1/1:20,29:50:25.19:358,25,0	1/1:10,21:31:18.06:286,18,0	0/1:22,38:64:2.72:416,0,3	1/1:36,0:35:3.37:8,3,0	0/1:85,0:85:8.93:9,0,2667	0/0:34,0:34:52.87:0,53,759	0/1:16,0:16:2.86:3,0,426
chr10	7162077	.	A	ATG	4718.65	PASS	AB=0.954;AC=38;AF=0.704;AN=54;BaseQRankSum=3.987;DP=1163;FS=43.563;HRun=0;HaplotypeScore=260.6774;InbreedingCoeff=0.3694;MQ=34.84;MQ0=24;MQRankSum=1.939;QD=5.36;ReadPosRankSum=-0.739;VQSLOD=2.8628;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:43,0:44:37.51:572,38,0	0/1:16,0:16:0.01:0,0,0	0/0:48,0:11:21.01:0,21,233	0/0:60,0:16:39.09:0,39,464	0/1:30,3:32:0:0,0,0	1/1:11,2:12:5.84:41,6,0	0/1:27,3:30:4.90:20,0,5	0/1:56,1:51:99:542,0,155	1/1:40,1:42:6.97:56,7,0	0/1:77,11:86:82.38:817,0,82	0/1:37,1:36:0:0,0,0	1/1:45,0:46:15.05:230,15,0	1/1:47,0:48:34.55:776,35,0	1/1:46,0:45:12.02:176,12,0	1/1:39,0:38:5.55:27,6,0	1/1:42,4:46:5.65:67,6,0	1/1:18,1:20:8.41:81,8,0	0/1:22,1:22:4.23:45,0,4	1/1:12,1:10:8.58:116,9,0	1/1:34,2:35:4.56:22,5,0	./.	1/1:53,0:53:25.87:366,26,0	1/1:30,0:30:18.06:296,18,0	1/1:57,1:65:0.23:426,0,0	1/1:36,1:36:7.58:31,8,0	0/0:86,0:85:99:0,113,1914	0/0:35,0:35:50.70:0,51,636	0/1:17,0:17:10.38:10,0,284
chr10	7162081	.	G	GTA	1859.66	PASS	AB=0.997;AC=18;AF=0.321;AN=56;BaseQRankSum=2.849;DP=1175;FS=16.382;HRun=0;HaplotypeScore=283.1086;InbreedingCoeff=-0.1558;MQ=34.01;MQ0=33;MQRankSum=4.358;QD=2.75;ReadPosRankSum=4.311;VQSLOD=0.7840;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:44,1:45:12.61:244,0,13	0/0:15,0:15:2.13:0,2,23	0/0:53,0:7:21.07:0,21,311	0/0:57,0:14:42.14:0,42,625	0/0:34,1:33:5.15:0,5,47	1/1:14,0:13:1.67:9,2,0	0/0:29,0:29:5.16:0,5,43	0/1:62,0:56:99:200,0,602	0/1:44,0:44:2.77:32,0,3	0/1:81,2:81:99:341,0,563	0/1:38,0:36:0:0,0,0	0/1:46,0:46:49.03:91,0,49	0/1:51,0:50:26.27:395,0,26	0/1:47,0:46:9.46:69,0,9	0/0:40,0:39:5.38:0,5,24	0/1:45,0:45:27.01:27,0,42	0/1:20,0:20:23.36:23,0,26	0/1:24,0:23:23.71:24,0,26	0/1:12,0:9:25.46:25,0,45	0/0:35,1:35:3.85:0,4,25	0/0:59,0:52:8.90:0,9,62	1/1:53,0:53:4.81:176,5,0	0/1:32,0:32:2.94:141,0,3	0/1:61,0:61:36.14:212,0,36	0/0:38,0:37:5.38:0,5,14	0/0:84,0:85:99:0,174,2622	0/0:34,0:35:56.71:0,57,801	0/0:14,0:14:19.90:0,20,424
chr10	7162085	.	G	GCGC	59.10	PASS	AB=0.927;AC=12;AF=0.214;AN=56;BaseQRankSum=4.576;DP=1138;FS=28.224;HRun=0;HaplotypeScore=288.5283;InbreedingCoeff=0.2216;MQ=33.42;MQ0=38;MQRankSum=-4.691;QD=0.21;ReadPosRankSum=-5.311;VQSLOD=0.3897;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:40,2:42:25.54:0,26,216	1/1:15,0:15:0.22:2,0,0	0/0:58,0:7:21.07:0,21,380	0/0:53,0:14:39.13:0,39,711	0/0:32,0:31:5.49:0,5,31	1/1:13,1:13:1.62:17,2,0	0/1:22,4:26:27.70:28,0,57	0/0:63,4:59:9.15:0,9,1161	0/1:41,3:45:13.34:13,0,42	0/0:77,1:76:99:0,153,1975	0/0:39,0:38:0:0,0,0	0/0:42,0:42:18.82:0,19,125	0/0:45,0:45:47.51:0,48,312	0/0:44,0:44:15.53:0,16,150	0/1:36,2:38:21.17:21,0,45	0/1:39,1:43:9.55:10,0,60	0/0:20,0:20:19.43:0,19,233	0/1:26,1:26:6.65:7,0,182	0/0:10,2:10:17.47:0,17,210	0/1:33,2:34:19.37:19,0,48	0/0:58,0:52:14.28:0,14,273	0/0:49,1:52:16.44:0,16,109	0/0:29,0:31:17.23:0,17,94	0/0:53,1:54:27.99:0,28,213	1/1:30,8:39:19.96:83,20,0	0/0:76,2:77:99:0,171,3626	0/0:34,0:34:59.86:0,60,1065	0/0:13,0:13:39.11:0,39,647
chr10	7162105	.	GCA	G	1576.66	PASS	AB=0.859;AC=10;AF=0.179;AN=56;BaseQRankSum=7.645;DP=1014;FS=50.221;HRun=0;HaplotypeScore=259.4727;InbreedingCoeff=0.1214;MQ=31.48;MQ0=34;MQRankSum=-4.616;QD=5.44;ReadPosRankSum=0.124;VQSLOD=1.4209;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,5:35:32.84:0,33,611	1/1:7,9:16:4.65:95,5,0	0/0:65,0:7:18.06:0,18,267	0/0:57,0:17:50.61:0,51,739	0/0:24,8:31:0:0,0,1	1/1:12,1:12:0.50:1,0,0	0/0:24,6:31:21.45:0,21,308	0/0:52,1:50:61.52:0,62,1470	0/1:34,0:34:1.53:2,0,30	0/1:61,24:85:99:977,0,1576	0/0:25,5:29:0:0,0,0	0/0:35,2:37:10.47:0,10,178	0/1:44,2:47:26.33:26,0,657	0/0:41,4:44:14.79:0,15,253	0/0:44,1:44:9.02:0,9,121	0/0:44,1:45:7.94:0,8,105	0/1:11,2:13:15.22:15,0,224	0/0:12,0:12:19.86:0,20,270	0/0:10,0:9:23.11:0,23,349	0/0:27,7:33:3.01:0,3,52	0/0:23,1:22:19:0,19,307	0/0:36,11:47:16.98:0,17,333	0/0:31,1:33:10.06:0,10,229	0/0:28,3:38:23.92:0,24,404	0/0:17,4:21:2.97:0,3,21	0/1:57,10:66:99:372,0,2169	0/0:27,3:30:48.12:0,48,767	0/1:7,6:13:99:212,0,322
chr10	7162107	.	A	ATG	2648.96	PASS	AB=0.990;AC=30;AF=0.536;AN=56;BaseQRankSum=-0.482;DP=1019;FS=1.341;HRun=0;HaplotypeScore=265.4000;InbreedingCoeff=0.0006;MQ=31.39;MQ0=37;MQRankSum=-0.944;QD=3.47;ReadPosRankSum=0.274;VQSLOD=2.3673;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:34,1:35:9.95:70,0,10	0/0:15,0:15:4.55:0,5,18	0/0:68,0:7:6.01:0,6,78	0/0:58,0:18:33.02:0,33,395	0/1:32,0:31:0:1,0,0	1/1:10,1:10:2.69:7,3,0	1/1:32,0:32:17.74:195,18,0	0/1:52,1:50:43.50:408,0,43	0/1:34,0:34:3.88:29,0,4	0/1:87,1:86:99:770,0,105	0/1:27,0:26:0:0,0,0	0/1:38,0:38:18.86:23,0,19	0/1:51,0:49:49.03:49,0,62	0/1:45,0:44:15.81:51,0,16	1/1:43,0:43:9.02:99,9,0	1/1:45,0:45:6.48:65,6,0	1/1:11,2:13:3.11:152,3,0	0/1:12,0:12:29.98:111,0,30	1/1:10,0:9:24.06:254,24,0	1/1:34,0:33:2.19:28,2,0	1/1:26,0:24:18.03:183,18,0	0/0:47,0:47:3.50:0,3,45	0/0:30,0:30:4.13:0,4,47	0/0:37,0:37:4.01:0,4,27	0/1:21,0:21:0:1,0,0	0/1:69,0:68:99:258,0,1279	0/1:29,3:32:45.90:46,0,373	0/1:13,0:13:1.96:2,0,240
chr10	7162115	.	G	GTA	4969.03	PASS	AB=0.774;AC=37;AF=0.661;AN=56;BaseQRankSum=-4.408;DP=998;FS=4.489;HRun=0;HaplotypeScore=242.9824;InbreedingCoeff=0.1766;MQ=31.31;MQ0=36;MQRankSum=4.089;QD=5.87;ReadPosRankSum=-2.896;VQSLOD=3.5452;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:20,9:34:19.86:248,20,0	0/0:12,4:16:5.56:0,6,52	0/0:65,0:8:12:0,12,130	0/0:54,0:19:41.88:0,42,459	0/1:18,13:34:0:1,0,0	1/1:4,4:9:2.06:6,2,0	1/1:15,16:33:2.60:301,3,0	0/1:41,15:53:66.11:945,0,66	0/1:17,15:35:12.67:47,0,13	0/1:51,32:85:99:1338,0,589	0/1:14,9:25:0:0,0,0	1/1:21,12:38:9.32:94,9,0	0/1:26,15:43:1.74:87,0,2	1/1:29,9:43:9.02:133,9,0	1/1:13,20:41:11.97:170,12,0	1/1:21,18:45:6.49:108,6,0	0/1:7,6:13:21.76:203,0,22	0/1:5,5:11:0.59:196,0,1	1/1:5,9:10:27.04:441,27,0	1/1:14,16:31:3.48:54,3,0	1/1:10,11:20:18.06:310,18,0	1/1:24,16:42:8.29:55,8,0	0/1:14,13:30:0.39:20,0,0	1/1:29,5:36:11.79:92,12,0	1/1:9,6:16:0.47:1,0,0	0/1:52,0:66:95.55:96,0,748	0/1:28,0:32:22.86:23,0,190	0/0:13,0:13:22.32:0,22,223
chr10	7162124	.	TGTGA	T	567.76	PASS	AB=0.950;AC=10;AF=0.179;AN=56;BaseQRankSum=7.511;DP=910;FS=36.049;HRun=0;HaplotypeScore=233.1439;InbreedingCoeff=0.0327;MQ=31.69;MQ0=24;MQRankSum=-5.592;QD=1.63;ReadPosRankSum=1.728;VQSLOD=1.0984;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:5.18:0,5,147	0/0:14,0:14:6.34:0,6,26	0/0:57,0:10:26.91:0,27,564	0/0:48,0:17:45.09:0,45,906	0/0:35,1:35:1.41:0,1,3	0/0:8,0:8:2.14:0,2,7	0/0:30,0:30:20.19:0,20,433	0/0:51,0:44:19.93:0,20,1911	0/1:26,6:32:44.12:44,0,45	0/1:83,0:81:99:180,0,1893	0/0:22,0:21:0:0,0,0	0/0:33,0:33:3.61:0,4,79	1/1:37,0:35:4.18:43,4,0	0/1:42,0:42:7.65:8,0,142	0/1:34,6:40:3.99:4,0,154	0/0:36,7:43:7.11:0,7,140	0/0:13,0:13:16.41:0,16,187	0/1:7,1:8:60.68:61,0,206	0/0:14,0:9:27.07:0,27,561	0/0:31,0:31:6.78:0,7,82	0/0:22,1:19:17.78:0,18,432	0/0:34,0:34:2.83:0,3,6	0/1:28,0:28:3.59:4,0,5	0/0:28,0:28:0.26:0,0,1	0/0:14,0:14:1.41:0,1,3	0/1:64,0:64:99:333,0,2719	0/0:31,0:31:5.85:0,6,726	0/1:14,0:14:17.56:18,0,507
chr10	7162126	.	TGA	T	520.23	PASS	AB=0.979;AC=15;AF=0.268;AN=56;BaseQRankSum=7.162;DP=890;FS=31.389;HRun=0;HaplotypeScore=217.1251;InbreedingCoeff=0.0638;MQ=31.71;MQ0=22;MQRankSum=-4.611;QD=1.24;ReadPosRankSum=-0.574;VQSLOD=1.3877;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:24,5:29:14.77:15,0,90	0/1:14,0:14:0.42:0,0,3	0/0:59,0:10:26.91:0,27,380	0/0:43,0:17:41.62:0,42,607	0/0:35,0:34:0.47:0,0,2	1/1:8,0:8:0.08:0,0,0	0/0:26,4:30:18.53:0,19,281	0/0:48,1:42:23.11:0,23,1292	0/1:32,0:32:19.21:19,0,28	0/1:80,0:78:66.60:67,0,1262	0/0:22,0:21:0:0,0,0	0/0:31,2:33:3.61:0,4,54	1/1:36,0:34:11.89:62,12,0	0/1:40,1:41:8.60:9,0,93	0/1:40,0:40:0.11:0,0,103	0/0:40,1:41:6.75:0,7,89	0/1:13,0:13:17.16:17,0,94	0/1:8,0:8:17.33:17,0,127	0/0:14,0:10:29.10:0,29,399	0/0:28,0:28:6.31:0,6,54	0/0:21,1:18:17.74:0,18,283	0/0:34,0:34:0.59:0,1,3	0/1:28,0:28:4.41:5,0,4	0/1:26,0:26:0.02:0,0,0	0/0:14,0:14:0.47:0,0,2	0/1:60,4:64:99:437,0,1855	0/0:31,0:31:12.32:0,12,551	0/0:14,0:14:22.74:0,23,380
chr10	7162139	.	GTGTGCA	G	189.07	PASS	AB=0.984;AC=5;AF=0.089;AN=56;BaseQRankSum=5.197;DP=786;FS=17.921;HRun=0;HaplotypeScore=210.6438;InbreedingCoeff=0.1944;MQ=31.88;MQ0=15;MQRankSum=-1.698;QD=1.49;ReadPosRankSum=0.018;VQSLOD=1.4226;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,1:27:6.49:0,6,213	0/0:13,0:13:8.68:0,9,78	0/0:42,0:10:29.69:0,30,737	0/0:35,0:14:30:0,30,645	0/0:31,0:30:2.30:0,2,6	1/1:8,0:8:3:28,3,0	0/0:23,0:23:20.28:0,20,587	0/0:34,0:28:59.31:0,59,1958	0/0:26,0:26:2.40:0,2,35	0/0:68,0:66:99:0,153,3660	0/0:26,0:25:3.24:0,3,8	0/0:34,0:34:3.85:0,4,108	0/1:33,0:31:10.32:10,0,54	0/0:39,0:39:9.87:0,10,269	0/0:33,0:33:6.02:0,6,153	0/0:35,0:35:8.83:0,9,180	0/0:12,0:12:5:0,5,110	0/0:5,0:5:6.49:0,6,78	0/0:14,0:7:21.07:0,21,685	0/0:27,0:27:3.48:0,3,66	0/0:20,0:16:19:0,19,482	0/0:37,0:37:5.37:0,5,13	0/1:27,0:27:4.34:8,0,4	0/0:25,0:25:0.45:0,0,1	0/0:12,0:12:1.41:0,1,4	0/1:56,3:59:99:245,0,2881	0/0:26,0:26:40.29:0,40,840	0/0:15,0:15:39.13:0,39,734
chr10	7162143	.	GCA	G	42.81	PASS	AB=0.982;AC=12;AF=0.214;AN=56;BaseQRankSum=6.931;DP=731;FS=27.249;HRun=0;HaplotypeScore=180.6671;InbreedingCoeff=0.2763;MQ=32.05;MQ0=13;MQRankSum=-2.834;QD=0.18;ReadPosRankSum=-1.539;VQSLOD=0.8676;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,2:24:5.75:0,6,122	0/1:14,0:14:1.75:2,0,64	0/0:37,0:10:29.67:0,30,452	0/0:28,0:13:29.94:0,30,444	0/0:30,0:29:0.94:0,1,2	1/1:7,0:7:3:27,3,0	0/0:22,0:22:20.94:0,21,380	0/0:28,1:24:44.23:0,44,1232	1/1:23,0:23:2.81:15,3,0	0/0:63,0:62:99:0,142,2351	0/0:25,1:25:2.83:0,3,3	0/0:33,0:33:3.85:0,4,62	0/1:31,0:29:17.94:18,0,61	0/0:37,0:37:9.03:0,9,160	0/0:31,0:31:6.02:0,6,108	0/0:32,0:32:7.69:0,8,125	0/0:10,0:10:5.02:0,5,65	0/0:5,0:5:0.26:0,0,67	0/0:14,0:7:21.07:0,21,416	0/0:26,1:27:3.89:0,4,51	0/0:18,1:15:19:0,19,286	0/1:35,2:37:0.28:10,0,0	1/1:24,1:25:7.08:34,7,0	0/1:22,0:22:0.03:0,0,0	0/0:12,0:12:0.47:0,0,2	0/1:53,1:54:56.39:56,0,1744	0/1:24,1:25:9.05:9,0,546	0/0:14,0:14:39.13:0,39,587
chr10	7162149	.	G	GTA	366.68	PASS	AB=0.930;AC=23;AF=0.411;AN=56;BaseQRankSum=4.875;DP=669;FS=12.913;HRun=0;HaplotypeScore=167.6927;InbreedingCoeff=0.3088;MQ=32.14;MQ0=10;MQRankSum=-4.849;QD=1.07;ReadPosRankSum=-0.668;VQSLOD=1.7836;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,2:24:5.70:0,6,91	0/0:12,1:13:8.27:0,8,49	0/0:26,0:8:15.15:0,15,241	0/0:22,0:10:21.05:0,21,251	1/1:22,8:29:0.47:2,0,0	1/1:6,1:7:2.60:10,3,0	0/0:19,0:19:18.06:0,18,266	0/0:23,0:18:51.16:0,51,753	1/1:17,3:20:2.60:57,3,0	0/1:54,4:57:99:142,0,923	1/1:18,6:23:2.36:3,2,0	0/0:29,4:33:2.87:0,3,45	0/0:25,4:28:7.98:0,8,36	0/0:33,3:36:7.85:0,8,104	0/0:22,7:29:2.75:0,3,46	0/0:28,4:32:4.38:0,4,74	0/1:10,0:10:2.92:3,0,41	1/1:5,0:5:2.40:19,2,0	0/0:10,0:6:18.06:0,18,273	1/1:24,2:26:3.77:6,4,0	0/0:18,0:14:12.02:0,12,163	1/1:34,1:35:2.83:7,3,0	1/1:21,2:23:1.27:18,1,0	0/1:19,1:20:0:1,0,0	1/1:11,1:12:0.47:1,0,0	0/1:46,5:51:99:197,0,1051	0/1:19,4:23:38.04:38,0,275	0/0:11,0:11:32.48:0,32,248
chr10	7166477	.	TA	T	325.73	PASS	AB=0.625;AC=4;AF=0.071;AN=56;BaseQRankSum=4.330;DP=533;FS=21.019;HRun=1;HaplotypeScore=55.5708;InbreedingCoeff=0.4078;MQ=82.97;MQ0=0;MQRankSum=-4.771;QD=9.87;ReadPosRankSum=-2.002;VQSLOD=-0.4682;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,123,1944	0/0:4,0:4:12.04:0,12,192	0/0:15,0:14:39.12:0,39,584	0/0:22,0:21:53.55:0,54,730	0/0:19,0:19:57.19:0,57,908	0/0:25,0:25:75.23:0,75,1150	0/0:18,0:18:54.17:0,54,834	0/0:48,0:48:99:0,141,2197	0/0:12,0:12:36.09:0,36,545	0/0:27,0:27:81.27:0,81,1273	0/0:17,0:17:48.16:0,48,767	0/0:17,0:17:51.16:0,51,789	0/0:17,0:17:51.16:0,51,776	0/0:10,0:10:27.09:0,27,427	0/0:23,0:23:66.23:0,66,1055	0/0:23,0:23:69.19:0,69,1027	0/0:28,0:28:81.25:0,81,1268	0/0:15,0:15:42.14:0,42,671	0/0:19,0:19:57.19:0,57,911	0/0:20,0:20:60.20:0,60,957	0/0:9,0:9:27.09:0,27,431	0/0:9,0:9:27.08:0,27,409	0/0:22,0:22:66.22:0,66,1051	0/0:16,0:16:48.16:0,48,767	0/0:21,0:21:63.21:0,63,1007	0/1:9,9:18:99:181,0,335	1/1:3,5:7:9.03:125,9,0	0/1:2,5:7:77.35:128,0,77
chr10	7166669	.	TACACACACACACACACACAC	T	913.52	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.179;DP=617;FS=14.681;HRun=0;HaplotypeScore=243.4477;InbreedingCoeff=0.6084;MQ=58.13;MQ0=27;MQRankSum=-3.236;QD=20.76;ReadPosRankSum=-0.716;VQSLOD=1.1609;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:25,19:44:24.08:1006,24,0	0/0:5,0:9:6.49:0,6,313	0/0:37,0:16:6.02:0,6,100	0/0:53,0:25:6.02:0,6,105	0/0:19,0:19:16.47:0,16,941	0/0:23,0:23:21.05:0,21,1380	0/0:25,0:25:15.09:0,15,926	0/0:22,0:19:27.09:0,27,1309	0/0:20,0:20:26.10:0,26,1782	0/0:20,0:20:42.14:0,42,2611	0/0:10,0:12:9.01:0,9,602	0/0:19,0:19:15.05:0,15,1207	0/0:25,0:25:22.54:0,23,1559	0/0:16,0:16:27.09:0,27,1542	0/0:21,0:32:28.04:0,28,1648	0/0:18,0:28:13.29:0,13,819	0/0:17,0:18:24.08:0,24,1454	0/0:11,0:9:12.04:0,12,831	0/0:12,0:13:21.07:0,21,1165	0/0:16,0:16:21.54:0,22,1455	0/0:26,0:40:33.11:0,33,1921	0/0:6,0:6:15.05:0,15,1196	0/0:13,0:13:14.22:0,14,894	0/0:41,0:41:69.24:0,69,5015	0/0:15,0:14:15.52:0,16,1189	0/0:20,0:19:45.15:0,45,2929	0/0:4,0:10:8.76:0,9,209	0/0:8,0:8:14.98:0,15,791
chr10	7167114	.	AGCC	A	6660.49	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=12.847;DP=634;FS=1.655;HRun=0;HaplotypeScore=100.0847;InbreedingCoeff=0.9835;MQ=75.26;MQ0=0;MQRankSum=-2.847;QD=44.40;ReadPosRankSum=6.984;VQSLOD=5.9017;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,135,3215	0/0:15,0:15:45.14:0,45,1060	0/0:13,0:13:14.28:0,14,793	0/0:13,0:13:30.09:0,30,645	0/0:21,0:21:54.19:0,54,1303	0/0:16,0:16:48.15:0,48,1132	0/0:38,0:38:99:0,114,2809	0/0:22,0:22:63.22:0,63,1538	0/0:19,0:19:54.19:0,54,1328	0/0:19,0:19:57.19:0,57,1365	0/0:13,0:13:33.58:0,34,799	1/1:0,39:39:99:2027,111,0	1/1:0,22:22:51.17:948,51,0	1/1:0,36:36:99:1844,99,0	0/0:28,0:28:84.29:0,84,2071	0/0:23,0:23:66.23:0,66,1627	0/0:33,0:33:99:0,99,2388	0/0:26,0:26:78.25:0,78,1861	0/0:22,0:22:60.18:0,60,1304	0/0:12,0:12:33.11:0,33,812	0/0:43,0:43:99:0,117,2839	1/1:0,16:16:33.11:614,33,0	1/1:0,13:13:8.82:165,9,0	1/1:0,24:24:57.20:1062,57,0	0/0:17,0:17:51.18:0,51,1253	0/0:18,0:18:54.19:0,54,1322	0/0:15,0:15:45.14:0,45,1059	0/0:12,0:12:36.10:0,36,781
chr10	7167537	.	TG	T	13783.49	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=1.633;DP=556;FS=4.290;HRun=5;HaplotypeScore=79.0938;InbreedingCoeff=0.9820;MQ=85.03;MQ0=0;MQRankSum=-6.205;QD=28.90;ReadPosRankSum=4.674;VQSLOD=5.2911;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,37:39:96.27:1089,96,0	1/1:0,4:4:9.03:102,9,0	0/0:18,0:18:48.16:0,48,647	0/0:20,0:20:54.17:0,54,703	1/1:1,9:10:24.07:272,24,0	1/1:1,10:11:30.09:340,30,0	1/1:0,24:24:69.20:783,69,0	1/1:3,14:17:36.09:408,36,0	1/1:1,16:17:45.13:508,45,0	1/1:1,15:16:45.13:510,45,0	1/1:0,16:16:45.13:509,45,0	1/1:1,28:29:84.24:952,84,0	1/1:0,24:24:69.20:782,69,0	1/1:3,19:23:56.19:617,56,0	1/1:1,14:15:39.11:442,39,0	1/1:0,14:14:33.09:374,33,0	1/1:1,35:36:93.26:1055,93,0	1/1:0,31:31:84.20:938,84,0	1/1:2,14:16:39.08:430,39,0	1/1:0,11:11:30.09:340,30,0	1/1:4,35:39:99:1123,99,0	1/1:3,16:19:42.12:476,42,0	1/1:1,15:16:36.10:407,36,0	1/1:1,31:32:81.23:919,81,0	1/1:0,18:18:36.10:407,36,0	0/0:17,0:17:48.15:0,48,635	0/0:19,0:19:57.18:0,57,764	0/0:5,0:5:15.05:0,15,205
chr10	7169819	.	G	GCCAA	7183.14	PASS	AB=1.000;AC=27;AF=0.482;AN=56;BaseQRankSum=9.715;DP=709;FS=0.000;HRun=0;HaplotypeScore=138.8978;InbreedingCoeff=0.1642;MQ=70.14;MQ0=2;MQRankSum=-1.286;QD=16.14;ReadPosRankSum=5.519;VQSLOD=4.3702;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:49,0:49:99:350,0,452	0/1:15,0:15:0.89:1,0,414	0/0:34,0:29:71.64:0,72,1014	0/0:36,0:30:83.47:0,83,1260	0/1:15,0:15:99:121,0,166	1/1:9,11:21:10.97:283,11,0	1/1:6,18:24:9.79:281,10,0	0/1:29,0:29:33.28:33,0,716	1/1:2,18:21:42.14:1004,42,0	0/0:19,0:19:5.07:0,5,448	0/1:10,0:10:76.07:140,0,76	0/0:38,0:38:99:0,105,1712	0/0:24,0:24:63.07:0,63,901	0/0:29,0:29:81.12:0,81,1266	0/1:22,0:22:99:195,0,264	1/1:5,17:23:30.57:716,31,0	1/1:26,15:41:84.87:1652,85,0	0/1:34,0:34:99:230,0,328	1/1:9,7:15:2.78:280,3,0	1/1:6,13:20:3.13:713,3,0	0/1:36,0:36:99:212,0,277	0/0:18,0:18:51.15:0,51,858	0/0:21,0:21:58.32:0,58,924	0/0:44,0:44:99:0,120,2086	1/1:4,14:19:21.19:564,21,0	0/1:25,0:25:99:214,0,307	0/1:14,0:14:45.74:153,0,46	0/1:11,0:11:42.87:43,0,153
chr10	7169823	.	G	GCCAA	13045.98	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-3.355;DP=715;FS=7.368;HRun=0;HaplotypeScore=116.4329;InbreedingCoeff=0.9488;MQ=65.13;MQ0=3;MQRankSum=0.519;QD=27.35;ReadPosRankSum=1.984;VQSLOD=4.5724;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:17,33:52:54.19:1278,54,0	1/1:8,5:15:10.23:167,10,0	0/0:31,0:25:17.78:0,18,197	0/0:36,0:28:17.81:0,18,196	1/1:6,11:18:26.99:529,27,0	1/1:20,0:20:14.98:303,15,0	1/1:24,0:24:21.04:363,21,0	1/1:29,0:29:38.96:401,39,0	1/1:22,0:22:42.14:967,42,0	1/1:9,9:18:18.91:345,19,0	1/1:2,8:11:21.03:447,21,0	0/0:38,0:38:78.12:0,78,1115	0/0:23,0:23:38.58:0,39,511	0/0:28,0:28:60.04:0,60,808	1/1:11,12:26:27.09:646,27,0	1/1:19,0:19:30.10:713,30,0	1/1:43,0:43:96.13:1765,96,0	1/1:10,22:32:39.13:928,39,0	1/1:15,0:14:14.64:262,15,0	1/1:20,0:20:8.31:728,8,0	1/1:14,23:38:39.13:935,39,0	0/0:17,0:17:39.11:0,39,573	0/0:22,0:22:38.99:0,39,540	0/0:43,0:43:92.55:0,93,1408	1/1:21,0:21:27.09:599,27,0	1/1:9,15:26:8.26:954,8,0	1/1:4,12:16:21.07:501,21,0	1/1:4,7:12:9.03:216,9,0
chr10	7170604	.	T	TCATC	12839.81	PASS	AB=0.935;AC=17;AF=0.304;AN=56;BaseQRankSum=-19.117;DP=1028;FS=2.594;HRun=0;HaplotypeScore=218.1289;InbreedingCoeff=0.9140;MQ=71.36;MQ0=2;MQRankSum=0.449;QD=37.54;ReadPosRankSum=-1.798;VQSLOD=4.7260;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:72,0:72:99:0,138,2253	1/1:4,11:15:39.13:936,39,0	0/0:34,0:32:30.55:0,31,418	0/0:41,0:40:17.99:0,18,577	1/1:4,26:30:54.12:1258,54,0	0/0:26,0:26:60.14:0,60,911	0/0:31,0:31:72.23:0,72,1157	1/1:17,25:47:93.17:1596,93,0	0/0:40,0:40:93.29:0,93,1478	1/1:14,34:51:99:2405,108,0	1/1:8,17:25:45.15:1020,45,0	0/0:9,0:39:71.12:0,71,648	0/0:12,0:48:79.29:0,79,696	0/0:6,0:39:81.03:0,81,740	1/1:9,41:53:87.30:2101,87,0	0/0:54,0:54:99:0,123,1999	0/0:40,0:40:75.26:0,75,1225	1/1:6,16:22:36.08:967,36,0	0/0:18,0:18:27.09:0,27,422	0/0:34,0:34:87.25:0,87,1356	1/1:9,46:56:99:2448,102,0	0/0:8,0:36:69.01:0,69,626	0/0:6,0:28:44.05:0,44,371	0/0:4,0:36:60.06:0,60,558	0/0:21,0:21:39.12:0,39,617	0/1:40,3:43:99:110,0,1328	0/0:28,0:28:60.19:0,60,960	0/0:20,0:20:48.16:0,48,783
chr10	7172220	.	T	TACAC	14895.07	PASS	AB=0.701;AC=32;AF=0.571;AN=56;BaseQRankSum=-12.139;DP=774;FS=8.517;HRun=0;HaplotypeScore=127.9063;InbreedingCoeff=0.7100;MQ=63.30;MQ0=9;MQRankSum=-2.304;QD=28.87;ReadPosRankSum=1.122;VQSLOD=4.5189;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:43:83.58:0,84,1272	1/1:7,5:13:12:240,12,0	0/0:27,0:16:12.02:0,12,145	0/1:34,0:26:8.70:9,0,317	1/1:5,11:15:24.08:586,24,0	0/0:19,0:21:32.09:0,32,766	0/0:26,0:26:42.11:0,42,641	1/1:15,10:32:47.51:795,48,0	0/0:28,0:28:72.23:0,72,1151	1/1:15,17:35:57.16:1230,57,0	1/1:9,9:21:23.55:464,24,0	1/1:8,19:32:39.13:952,39,0	1/1:8,18:32:51.06:1245,51,0	1/1:7,13:25:41.61:904,42,0	1/1:10,27:41:65.75:1620,66,0	0/0:25,0:26:66.18:0,66,1028	0/0:26,0:28:69.22:0,69,1084	1/1:4,11:21:35.55:700,36,0	0/0:14,0:14:21.05:0,21,297	0/0:17,0:20:26.84:0,27,561	1/1:16,38:59:62.82:1477,63,0	0/1:10,14:27:16.18:700,0,16	0/1:10,12:25:17.57:579,0,18	1/1:9,19:31:50.91:1185,51,0	0/0:23,0:25:54.18:0,54,863	0/1:10,14:30:18.56:973,0,19	1/1:4,11:19:33.11:797,33,0	1/1:2,9:14:18.06:440,18,0
chr10	7172794	.	CA	C	13045.41	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-2.607;DP=651;FS=2.646;HRun=9;HaplotypeScore=80.1606;InbreedingCoeff=0.9922;MQ=58.76;MQ0=3;MQRankSum=0.492;QD=22.49;ReadPosRankSum=3.874;VQSLOD=5.6766;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,18:21:57.03:520,57,0	1/1:1,8:9:24.01:219,24,0	0/0:35,1:18:38.79:0,39,403	0/0:35,0:18:25.60:0,26,247	1/1:1,27:27:37.47:596,37,0	1/1:5,19:24:63.03:576,63,0	1/1:9,15:23:16.97:446,17,0	1/1:5,19:24:42.14:515,42,0	1/1:3,18:22:56.05:499,56,0	1/1:4,23:27:63.03:577,63,0	1/1:3,23:24:63.03:575,63,0	1/1:1,18:19:51.03:467,51,0	1/1:2,17:19:42.02:384,42,0	1/1:2,23:25:54.03:494,54,0	1/1:1,19:20:51.03:467,51,0	1/1:3,14:17:42.02:384,42,0	1/1:6,22:28:72.02:653,72,0	1/1:5,22:27:60.03:549,60,0	1/1:6,12:19:50.05:441,50,0	1/1:8,19:26:66.03:603,66,0	1/1:0,18:18:51.03:467,51,0	1/1:2,20:21:54.03:494,54,0	1/1:1,11:12:26.83:246,27,0	1/1:4,14:18:35.89:329,36,0	1/1:2,17:19:57.03:520,57,0	1/1:5,30:35:90.01:816,90,0	1/1:3,27:30:72.03:659,72,0	1/1:0,20:20:60.03:548,60,0
chr10	7172863	.	CTAA	C	7221.68	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=8.624;DP=596;FS=7.466;HRun=0;HaplotypeScore=103.3955;InbreedingCoeff=0.9984;MQ=81.61;MQ0=0;MQRankSum=-4.419;QD=39.25;ReadPosRankSum=1.748;VQSLOD=5.5672;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,21:24:51.15:783,51,0	0/0:8,0:8:21.07:0,21,464	0/0:20,0:20:48.16:0,48,993	0/0:16,0:16:40.02:0,40,787	0/0:27,0:27:72.20:0,72,1542	1/1:2,24:26:60.20:953,60,0	1/1:2,14:15:33.11:530,33,0	0/0:35,0:35:87.28:0,87,1752	1/1:1,19:20:57.19:905,57,0	0/0:29,0:28:81.23:0,81,1722	0/0:23,0:22:63.22:0,63,1388	0/0:20,0:20:60.21:0,60,1322	0/0:19,0:19:48.16:0,48,1045	0/0:19,0:19:45.15:0,45,989	0/0:23,0:23:66.23:0,66,1442	1/1:3,11:14:39.12:602,39,0	1/1:0,13:13:39.13:626,39,0	0/0:26,0:26:75.24:0,75,1607	1/1:1,21:22:63.19:966,63,0	1/1:3,25:28:72.24:1097,72,0	0/0:10,0:10:21.07:0,21,446	0/0:9,0:9:27.08:0,27,550	0/0:22,0:22:60.21:0,60,1314	0/0:13,0:13:30.04:0,30,550	1/1:3,18:21:48.16:759,48,0	0/0:31,0:31:84.24:0,84,1759	0/0:27,0:26:69.24:0,69,1520	0/0:35,0:35:99:0,105,2293
chr10	7173038	.	TATCTATC	T	4360.92	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=4.415;DP=578;FS=14.784;HRun=0;HaplotypeScore=174.2426;InbreedingCoeff=0.9496;MQ=53.02;MQ0=1;MQRankSum=-9.395;QD=24.92;ReadPosRankSum=-0.213;VQSLOD=3.5718;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:41.41:0,41,1518	1/1:3,11:14:14.97:255,15,0	0/0:18,0:14:12.04:0,12,424	0/0:9,0:8:12.04:0,12,406	1/1:7,25:32:26.91:439,27,0	0/0:13,0:13:27.09:0,27,865	0/0:9,0:7:15.05:0,15,491	1/1:22,6:26:24.03:446,24,0	0/0:21,0:21:48.16:0,48,1604	1/1:6,25:30:69.23:1602,69,0	1/1:4,15:19:17.73:431,18,0	0/0:25,0:25:59.84:0,60,2122	0/0:18,0:18:45.15:0,45,1671	0/0:19,0:19:51.17:0,51,1634	1/1:11,10:21:30.09:662,30,0	0/0:21,0:21:45.15:0,45,1610	0/0:25,0:25:56.69:0,57,1971	1/1:14,5:19:23.72:454,24,0	0/0:24,0:24:54.18:0,54,1872	0/0:27,0:27:69.24:0,69,2377	1/1:6,5:11:2.99:71,3,0	0/0:7,0:7:16.30:0,16,541	0/0:16,0:16:36.12:0,36,1345	0/0:13,0:13:24.07:0,24,826	0/0:16,0:16:30.10:0,30,1048	0/0:34,0:34:93.32:0,93,3230	0/0:32,0:32:66.23:0,66,2369	0/0:24,0:24:48.16:0,48,1704
chr10	7173080	.	TTATC	T	7421.76	PASS	AB=0.895;AC=25;AF=0.446;AN=56;BaseQRankSum=4.737;DP=560;FS=1.202;HRun=0;HaplotypeScore=168.7902;InbreedingCoeff=0.7571;MQ=49.19;MQ0=6;MQRankSum=-4.501;QD=28.11;ReadPosRankSum=3.772;VQSLOD=4.9434;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,15:27:48.41:638,48,0	0/0:19,0:19:51.18:0,51,1256	0/0:17,0:9:17.91:0,18,334	0/0:6,0:2:2.94:0,3,18	0/0:34,0:33:54.14:0,54,1346	1/1:3,11:14:32.22:455,32,0	1/1:4,5:6:12.04:204,12,0	0/0:36,0:34:78.27:0,78,1724	1/1:2,19:21:45.07:701,45,0	0/0:31,0:30:71.73:0,72,1632	0/0:26,0:26:54.18:0,54,1230	0/0:19,0:20:47.75:0,48,1118	0/0:23,0:23:60.19:0,60,1336	0/0:23,0:23:63.22:0,63,1498	0/0:20,0:20:48.16:0,48,1125	1/1:4,16:20:51.13:834,51,0	1/1:11,14:25:32.88:701,33,0	0/1:15,0:14:16:16,0,745	1/1:6,9:16:28.56:507,29,0	1/1:5,15:20:35.94:461,36,0	0/1:10,0:10:11.33:11,0,328	0/0:6,0:6:18.05:0,18,400	0/0:20,0:21:32.73:0,33,921	0/0:14,0:14:15.03:0,15,659	1/1:4,6:10:23.91:283,24,0	0/1:13,12:26:67.63:655,0,68	1/1:4,26:30:69.06:1047,69,0	1/1:3,18:21:57.13:908,57,0
chr10	7173135	.	A	AT	538.62	PASS	AB=0.990;AC=19;AF=0.352;AN=54;BaseQRankSum=11.586;DP=518;FS=5.254;HRun=2;HaplotypeScore=177.7358;InbreedingCoeff=-0.0106;MQ=47.44;MQ0=0;MQRankSum=-6.735;QD=1.67;ReadPosRankSum=5.095;VQSLOD=-0.3590;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:18,0:18:4.16:4,0,64	0/0:16,0:16:5.93:0,6,151	0/0:12,0:5:15.05:0,15,186	./.	0/1:33,0:31:52.80:53,0,109	0/1:22,1:23:49.13:49,0,84	0/0:7,0:5:0.33:0,0,1	0/1:33,1:32:86.98:87,0,441	0/0:21,0:21:1.13:0,1,133	0/1:24,1:24:99:103,0,164	0/1:20,0:19:33.67:34,0,70	0/0:15,0:15:42.12:0,42,508	0/0:19,0:19:51.16:0,51,631	0/0:21,0:21:54.14:0,54,654	0/1:22,0:22:3.24:3,0,107	0/1:18,0:18:50.18:92,0,50	0/1:7,0:8:29.16:29,0,68	0/1:31,0:30:46.94:47,0,127	0/0:13,0:11:15.97:0,16,198	1/1:25,0:24:0.95:73,1,0	1/1:11,1:12:2.40:42,2,0	0/0:5,0:5:12.04:0,12,148	0/0:16,0:16:39.12:0,39,483	0/0:13,0:14:29.29:0,29,371	1/1:16,0:16:14.22:32,14,0	0/1:18,0:18:6.17:6,0,90	0/0:29,0:29:2.13:0,2,225	1/1:20,0:20:17.72:40,18,0
chr10	7173136	.	T	TTATC	19580.43	PASS	AB=0.857;AC=37;AF=0.685;AN=54;BaseQRankSum=-1.766;DP=559;FS=0.959;HRun=0;HaplotypeScore=150.1361;InbreedingCoeff=0.8435;MQ=46.45;MQ0=1;MQRankSum=-4.655;QD=44.30;ReadPosRankSum=0.104;VQSLOD=5.3765;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:19:13.24:134,13,0	1/1:7,10:17:45.14:1012,45,0	0/0:13,0:5:9.03:0,9,145	./.	1/1:19,16:33:65.99:1540,66,0	1/1:22,4:26:48.92:1334,49,0	1/1:8,1:6:6.49:147,6,0	1/1:24,15:39:27.24:1151,27,0	1/1:22,2:24:42.14:996,42,0	1/1:17,11:26:40.76:1339,41,0	1/1:8,15:22:57.20:1295,57,0	0/0:15,0:15:30.10:0,30,518	0/0:19,0:19:45.14:0,45,727	0/0:21,0:21:48.15:0,48,802	1/1:9,15:24:51.17:1199,51,0	1/1:18,2:20:36.12:839,36,0	0/0:9,0:10:2.01:0,2,17	1/1:9,23:31:52.58:1482,53,0	1/1:12,1:11:18.06:424,18,0	1/1:23,4:26:57.20:1377,57,0	0/1:10,2:12:41.19:137,0,41	0/0:5,0:5:12.03:0,12,181	0/0:15,0:15:26.61:0,27,551	0/0:14,0:14:26.94:0,27,434	1/1:18,3:21:48.16:1197,48,0	1/1:4,14:19:42.14:1062,42,0	1/1:12,18:30:57.15:1353,57,0	1/1:1,20:23:63.22:1562,63,0
chr10	7173148	.	C	CT	2158.06	PASS	AB=0.880;AC=24;AF=0.429;AN=56;BaseQRankSum=9.506;DP=539;FS=0.375;HRun=1;HaplotypeScore=175.0995;InbreedingCoeff=-0.1659;MQ=46.26;MQ0=9;MQRankSum=-2.173;QD=5.00;ReadPosRankSum=5.847;VQSLOD=0.3030;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:18,3:21:33.42:36,0,33	0/1:16,0:16:3.18:202,0,3	0/0:17,0:4:9.03:0,9,126	0/1:5,0:2:0:0,0,0	0/1:32,3:34:99:210,0,136	0/1:9,14:23:2.47:163,0,2	1/1:8,3:9:8.37:62,8,0	0/1:37,0:32:84.01:84,0,667	0/1:10,9:19:82.78:129,0,83	0/1:28,1:27:99:223,0,270	0/1:25,0:24:77.50:149,0,78	0/0:14,0:14:33.11:0,33,461	0/0:18,0:18:48.16:0,48,668	0/0:18,0:18:54.18:0,54,755	1/1:21,2:23:0.31:158,0,0	0/1:7,11:18:55.61:62,0,56	0/0:7,0:7:0:0,0,0	1/1:23,3:27:0.63:182,1,0	0/1:6,4:7:33.81:34,0,40	0/1:17,15:31:99:174,0,126	0/1:6,0:8:0.19:42,0,0	0/0:4,0:4:12.04:0,12,168	0/0:14,0:14:39.60:0,40,547	0/0:15,0:15:35.40:0,35,477	1/1:11,12:23:2.18:154,2,0	0/1:20,0:20:61.87:62,0,144	0/1:22,0:22:81.07:81,0,114	0/1:27,0:27:24.68:104,0,25
chr10	7173158	.	T	TC	528.06	PASS	AB=0.727;AC=11;AF=0.196;AN=56;BaseQRankSum=12.864;DP=543;FS=2.679;HRun=0;HaplotypeScore=177.8282;InbreedingCoeff=0.3951;MQ=46.85;MQ0=9;MQRankSum=-10.283;QD=3.72;ReadPosRankSum=-0.552;VQSLOD=3.0038;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:19:20.30:0,20,171	0/0:12,0:12:36.08:0,36,480	0/0:10,0:1:3.01:0,3,42	0/1:5,1:2:0:0,0,0	0/0:32,0:31:77.76:0,78,1007	1/1:5,13:22:13.27:180,13,0	0/0:1,1:5:3.01:0,3,42	0/0:39,0:34:90.27:0,90,1234	0/1:2,9:19:22.30:121,0,22	0/0:30,0:28:76.97:0,77,1061	0/0:27,0:25:49:0,49,748	0/0:17,0:17:45.10:0,45,593	0/0:17,0:17:48.16:0,48,671	0/0:17,0:17:48.16:0,48,671	0/0:20,0:20:57.01:0,57,747	0/1:2,9:18:4.81:61,0,5	1/1:1,0:7:1.81:5,2,0	0/0:28,1:28:12.19:0,12,755	0/1:5,3:7:12.95:13,0,71	0/1:3,15:31:50.65:144,0,51	0/0:8,0:8:5.56:0,6,124	0/0:7,0:7:21.06:0,21,279	0/0:14,0:14:39.60:0,40,547	0/0:17,1:18:44.12:0,44,606	1/1:3,12:29:9.08:143,9,0	0/0:22,0:22:66.22:0,66,921	0/0:26,0:26:52.24:0,52,842	0/0:30,0:30:38.91:0,39,739
chr10	7173161	.	TC	T	737.83	PASS	AB=0.856;AC=15;AF=0.268;AN=56;BaseQRankSum=10.219;DP=552;FS=3.340;HRun=1;HaplotypeScore=177.7081;InbreedingCoeff=0.7473;MQ=47.32;MQ0=9;MQRankSum=-8.167;QD=5.05;ReadPosRankSum=2.218;VQSLOD=0.7198;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:27.39:0,27,395	0/0:12,0:12:36.12:0,36,575	0/0:11,0:1:3.01:0,3,48	0/1:6,0:2:0:0,0,0	0/0:35,0:34:84.05:0,84,1339	1/1:8,13:21:34.29:150,34,0	0/1:6,1:5:13.94:14,0,39	0/0:43,0:39:99:0,111,1690	1/1:9,9:18:35.80:149,36,0	0/0:28,0:26:78.26:0,78,1230	0/0:26,0:24:69.22:0,69,1074	0/0:17,0:17:45.15:0,45,718	0/0:17,0:17:51.13:0,51,785	0/0:17,0:17:51.17:0,51,805	0/0:23,0:23:60.20:0,60,954	1/1:9,9:18:25.73:100,26,0	1/1:8,0:8:11.87:80,12,0	0/0:26,0:26:54.34:0,54,856	0/1:5,4:7:36.76:37,0,57	1/1:17,15:31:47.43:212,47,0	0/0:8,0:8:9.26:0,9,144	0/0:7,0:7:21.07:0,21,331	0/0:14,0:14:37.24:0,37,620	0/0:18,0:18:42.14:0,42,672	1/1:15,12:27:40.06:183,40,0	0/0:25,0:25:72.19:0,72,1100	0/0:27,0:27:69.19:0,69,1052	0/0:29,0:29:57.19:0,57,911
chr10	7173204	.	CATCT	C	569.01	PASS	AB=0.810;AC=2;AF=0.036;AN=56;BaseQRankSum=3.580;DP=606;FS=0.892;HRun=0;HaplotypeScore=210.1251;InbreedingCoeff=0.1711;MQ=49.35;MQ0=4;MQRankSum=-4.245;QD=17.78;ReadPosRankSum=-2.214;VQSLOD=3.1734;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:10,16:26:4.03:640,0,4	0/0:7,0:7:18.06:0,18,375	0/0:9,0:4:9.03:0,9,199	0/0:2,0:3:6.02:0,6,130	0/0:39,0:39:70.04:0,70,1249	0/0:21,0:21:42.14:0,42,975	0/0:8,0:7:9.03:0,9,225	0/0:36,0:34:77.87:0,78,1476	0/0:18,0:18:39.13:0,39,883	0/0:26,0:25:55.29:0,55,1181	0/0:25,0:23:52.94:0,53,1024	0/0:17,0:17:45.15:0,45,1128	0/0:15,0:15:42.14:0,42,1035	0/0:20,0:20:60.21:0,60,1507	0/0:25,0:25:54.60:0,55,1090	0/0:20,0:20:45.15:0,45,999	0/0:19,0:19:41.82:0,42,995	0/0:24,0:25:42:0,42,627	0/0:12,0:9:27.04:0,27,637	0/0:37,0:37:99:0,99,2435	0/1:5,0:6:14.33:14,0,111	0/0:11,0:11:33.11:0,33,830	0/0:24,0:24:72.23:0,72,1822	0/0:22,0:23:48.16:0,48,1208	0/0:34,0:34:81.28:0,81,1898	0/0:31,0:31:87.30:0,87,2212	0/0:35,0:34:96.33:0,96,2434	0/0:32,0:33:89.52:0,90,2223
chr10	7173214	.	T	TTATC	6867.16	PASS	AB=0.905;AC=17;AF=0.304;AN=56;BaseQRankSum=-2.780;DP=609;FS=1.862;HRun=0;HaplotypeScore=193.0253;InbreedingCoeff=0.7286;MQ=54.17;MQ0=3;MQRankSum=-5.819;QD=33.02;ReadPosRankSum=-1.442;VQSLOD=4.5026;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:28:99:112,0,475	1/1:3,3:6:9.03:232,9,0	0/0:15,0:8:17.03:0,17,241	0/1:8,0:7:16.79:17,0,48	1/1:12,25:39:62.26:1437,62,0	0/0:20,0:20:36.01:0,36,542	0/0:11,0:11:15.04:0,15,226	1/1:16,12:28:36.09:797,36,0	0/0:18,0:18:30.10:0,30,521	1/1:8,15:24:63.10:1569,63,0	1/1:12,9:21:33.11:758,33,0	0/0:16,0:16:42.10:0,42,734	0/0:16,0:16:39.12:0,39,652	0/0:19,0:19:48.16:0,48,854	1/1:4,17:22:54.18:1245,54,0	0/0:20,0:20:30.06:0,30,500	0/0:19,0:20:40.29:0,40,706	0/1:14,6:21:44.20:501,0,44	0/0:11,0:9:27.09:0,27,480	0/0:41,0:41:99:0,99,1658	1/1:3,2:6:12.46:199,12,0	0/0:12,0:12:36.11:0,36,612	0/0:25,0:25:69.23:0,69,1200	0/0:21,0:22:42.14:0,42,748	0/0:35,0:35:72.25:0,72,1283	0/0:33,0:33:84.28:0,84,1470	0/0:32,0:31:90.31:0,90,1588	0/0:35,0:35:60.90:0,61,1312
chr10	7173222	.	C	CT	550	PASS	AB=0.922;AC=10;AF=0.179;AN=56;BaseQRankSum=4.840;DP=593;FS=1.484;HRun=1;HaplotypeScore=180.6533;InbreedingCoeff=0.0042;MQ=57.96;MQ0=3;MQRankSum=-4.648;QD=3.06;ReadPosRankSum=1.734;VQSLOD=0.0546;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:26,2:28:47.51:48,0,649	1/1:3,1:4:7.49:28,7,0	0/0:13,0:8:18.01:0,18,218	0/0:13,0:11:10.70:0,11,105	0/1:35,1:36:18.49:141,0,18	0/0:20,0:20:36.12:0,36,503	0/0:9,0:9:21.07:0,21,292	0/1:21,0:18:54.34:54,0,197	0/0:14,0:14:30.10:0,30,419	0/1:20,4:24:62:244,0,62	0/1:17,2:17:35.81:36,0,123	0/0:21,0:21:60.20:0,60,834	0/0:18,0:18:48.16:0,48,665	0/0:19,0:19:54.18:0,54,753	0/1:19,1:19:36.78:77,0,37	0/0:17,0:17:30.10:0,30,419	0/0:26,0:26:52.99:0,53,706	0/1:16,3:20:60.86:61,0,119	0/0:11,0:9:27.09:0,27,377	0/0:41,0:41:99:0,105,1450	0/1:6,1:8:5.05:5,0,78	0/0:14,0:14:39.13:0,39,544	0/0:25,0:25:75.25:0,75,1047	0/0:20,1:21:45.14:0,45,613	0/0:34,0:34:75.25:0,75,1047	0/0:33,0:33:99:0,99,1384	0/0:34,0:33:99:0,99,1390	0/0:30,0:30:84.28:0,84,1171
chr10	7173250	.	TTATC	T	9909.33	PASS	AB=1.000;AC=25;AF=0.446;AN=56;BaseQRankSum=-0.350;DP=679;FS=11.248;HRun=0;HaplotypeScore=194.0688;InbreedingCoeff=0.8933;MQ=69.00;MQ0=1;MQRankSum=2.982;QD=30.40;ReadPosRankSum=5.592;VQSLOD=3.7954;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:57.17:0,57,1184	1/1:4,0:6:1.72:3,2,0	0/0:27,0:18:27.40:0,27,565	0/1:37,0:25:17.11:17,0,184	0/0:18,0:38:33.18:0,33,535	1/1:1,22:23:45.15:772,45,0	1/1:2,8:9:18.06:309,18,0	0/0:27,0:27:53.90:0,54,659	1/1:1,13:14:33.07:535,33,0	0/0:12,0:27:62.01:0,62,903	0/0:4,0:23:54.13:0,54,919	0/0:17,0:17:42.14:0,42,1024	0/0:17,0:17:39.13:0,39,922	0/0:17,0:17:36.12:0,36,809	0/0:9,0:19:13.24:0,13,261	1/1:3,19:22:36.12:618,36,0	1/1:5,25:31:60.19:1030,60,0	0/0:10,0:20:18.81:0,19,540	1/1:4,11:15:30.99:504,31,0	1/1:4,34:38:78.19:1277,78,0	0/0:3,0:13:9.86:0,10,160	0/0:16,0:16:36.12:0,36,820	0/0:24,0:24:69.24:0,69,1702	0/0:24,0:24:45.15:0,45,1068	1/1:11,18:29:54.14:842,54,0	1/1:6,29:35:90.31:1514,90,0	1/1:10,30:40:90.28:1492,90,0	1/1:8,18:26:60.20:997,60,0
chr10	7173251	.	TATC	T	2284.67	PASS	AB=0.990;AC=21;AF=0.375;AN=56;BaseQRankSum=4.562;DP=675;FS=13.599;HRun=0;HaplotypeScore=206.1428;InbreedingCoeff=0.1759;MQ=69.23;MQ0=1;MQRankSum=-0.983;QD=5.98;ReadPosRankSum=6.673;VQSLOD=0.8833;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:56.87:0,57,1000	0/1:6,0:6:21.60:84,0,22	0/0:26,0:18:38.91:0,39,695	0/0:37,0:25:42.30:0,42,465	0/1:38,0:38:36.39:36,0,733	1/1:23,0:23:20.89:190,21,0	0/1:10,0:9:17.14:66,0,17	0/0:34,0:26:18.10:0,18,869	0/1:14,0:14:2.81:129,0,3	0/1:26,1:27:28.15:28,0,948	0/0:24,0:23:60.20:0,60,993	0/0:17,0:17:45.15:0,45,1063	0/0:18,0:18:51.16:0,51,1096	0/0:17,0:17:45.15:0,45,994	0/1:19,0:19:29.46:29,0,290	1/1:22,0:22:34.09:172,34,0	1/1:29,0:29:59.31:295,59,0	0/0:19,2:21:5.41:0,5,772	0/1:15,0:15:88.83:89,0,143	1/1:37,0:37:39.93:347,40,0	0/1:11,1:12:47.67:48,0,136	0/0:16,0:16:48.14:0,48,1020	0/0:24,0:24:69.24:0,69,1675	0/0:24,0:24:51.06:0,51,1099	1/1:29,0:29:12.86:172,13,0	0/1:35,0:35:55.04:306,0,55	0/1:40,0:39:99:298,0,145	0/1:26,0:26:99:184,0,154
chr10	7173337	.	C	CATCT	8677.63	PASS	AB=0.887;AC=29;AF=0.558;AN=52;BaseQRankSum=-7.427;DP=684;FS=6.456;HRun=0;HaplotypeScore=168.9375;InbreedingCoeff=0.6781;MQ=52.73;MQ0=19;MQRankSum=3.427;QD=22.19;ReadPosRankSum=-0.983;VQSLOD=4.1988;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:43:9.43:0,9,438	0/0:23,0:23:39.04:0,39,557	./.	./.	0/0:42,0:43:78.23:0,78,1137	1/1:14,11:26:45.15:1002,45,0	1/1:11,4:15:6.02:140,6,0	0/0:34,0:30:2.19:0,2,19	1/1:14,8:22:29.66:696,30,0	0/1:23,5:27:10.03:651,0,10	0/1:20,5:26:25.06:376,0,25	0/0:6,0:18:24.03:0,24,223	0/0:8,0:18:20.30:0,20,193	0/0:7,0:18:18.02:0,18,167	1/1:8,17:26:39.13:912,39,0	1/1:11,7:19:30.10:695,30,0	1/1:22,9:31:30.10:656,30,0	1/1:19,10:30:2.07:851,2,0	1/1:14,9:22:30.10:698,30,0	1/1:21,15:37:57.20:1303,57,0	0/0:19,0:19:27.09:0,27,415	0/0:6,0:14:16.26:0,16,140	0/0:15,0:22:8.95:0,9,82	0/1:12,0:17:0:0,0,0	1/1:20,0:26:34.15:450,34,0	1/1:12,0:22:20.53:172,21,0	1/1:16,0:29:3.01:50,3,0	1/1:13,0:13:2.99:24,3,0
chr10	7174096	.	C	CA	4923.77	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-15.170;DP=657;FS=0.722;HRun=8;HaplotypeScore=60.9211;InbreedingCoeff=0.9976;MQ=82.78;MQ0=1;MQRankSum=-2.231;QD=29.48;ReadPosRankSum=1.000;VQSLOD=4.8531;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,102,927	0/0:10,0:10:27.01:0,27,247	0/0:18,0:19:33:0,33,298	0/0:27,0:26:35.76:0,36,391	0/0:26,0:26:71.97:0,72,642	1/1:2,9:11:21.06:242,21,0	1/1:1,16:17:45.13:519,45,0	0/0:39,0:39:99:0,102,921	1/1:1,21:22:60.18:693,60,0	0/0:32,0:32:84.04:0,84,769	0/0:26,0:26:69.03:0,69,632	0/0:21,0:21:51.02:0,51,467	0/0:29,0:29:78.04:0,78,714	0/0:20,0:20:54.03:0,54,494	0/0:27,0:27:75.04:0,75,686	1/1:0,20:20:60.18:692,60,0	1/1:4,30:34:84.25:969,84,0	0/0:14,0:14:42.02:0,42,384	1/1:4,14:18:17.66:457,18,0	1/1:3,23:26:66.20:762,66,0	0/0:15,0:15:38.99:0,39,351	0/0:26,0:26:66.02:0,66,604	0/0:16,0:16:48.03:0,48,439	0/0:22,0:22:63.03:0,63,577	1/1:2,17:19:51.15:589,51,0	0/0:30,0:31:89.08:0,89,802	0/0:35,0:35:99:0,99,898	0/0:16,0:16:40.26:0,40,381
chr10	7174478	.	GA	G	2762.10	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=12.809;DP=539;FS=2.392;HRun=8;HaplotypeScore=49.2646;InbreedingCoeff=0.9910;MQ=72.98;MQ0=0;MQRankSum=-0.043;QD=23.81;ReadPosRankSum=2.803;VQSLOD=4.2793;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:69.20:0,69,822	0/0:7,0:7:18.06:0,18,217	0/0:9,0:9:24:0,24,254	0/0:7,0:7:15.05:0,15,181	0/0:30,0:30:81.18:0,81,960	0/0:21,0:21:60.17:0,60,714	0/0:22,0:22:54.12:0,54,617	0/0:25,0:25:60.17:0,60,705	0/0:12,0:12:33.10:0,33,399	0/0:25,0:25:69.20:0,69,815	0/0:16,0:16:39.12:0,39,471	1/1:1,21:22:60.09:579,60,0	1/1:1,13:14:39.06:377,39,0	1/1:2,20:22:57.09:550,57,0	0/0:16,0:16:42.13:0,42,507	0/0:18,0:18:48.13:0,48,560	0/0:12,0:12:36.11:0,36,435	0/0:18,0:18:51.16:0,51,616	0/0:34,0:34:90.27:0,90,1078	0/0:25,0:25:72.21:0,72,858	0/0:5,0:5:15.05:0,15,181	1/1:2,14:16:45.06:430,45,0	1/1:1,24:25:72.11:695,72,0	1/1:3,14:17:33.05:319,33,0	0/0:25,0:25:63.19:0,63,761	0/0:34,0:34:96.29:0,96,1150	0/0:22,0:22:66.19:0,66,784	0/0:13,0:13:24.07:0,24,290
chr10	7174787	.	CT	C	2175.30	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=6.866;DP=656;FS=4.605;HRun=2;HaplotypeScore=67.9599;InbreedingCoeff=0.9888;MQ=85.16;MQ0=0;MQRankSum=-0.929;QD=31.53;ReadPosRankSum=1.183;VQSLOD=3.3889;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:61,0:61:99:0,181,2668	0/0:13,0:13:39.13:0,39,585	0/0:27,0:27:73.93:0,74,1070	0/0:18,0:18:51.17:0,51,721	0/0:19,0:19:57.18:0,57,831	0/0:20,0:20:54.18:0,54,809	0/0:29,0:29:84.28:0,84,1256	0/0:29,0:29:84.27:0,84,1238	0/0:26,0:26:75.25:0,75,1124	0/0:25,0:25:75.25:0,75,1123	0/0:19,0:19:57.16:0,57,813	0/0:13,0:13:39.12:0,39,566	0/0:20,0:20:57.19:0,57,854	0/0:19,0:19:54.18:0,54,804	0/0:20,0:20:60.19:0,60,877	0/0:18,0:18:54.18:0,54,807	0/0:15,0:15:45.14:0,45,647	0/0:16,0:16:48.16:0,48,716	0/0:27,0:27:75.25:0,75,1124	0/0:22,0:22:66.18:0,66,964	0/0:35,0:35:99:0,102,1509	0/0:18,0:18:51.14:0,51,707	0/0:20,0:20:57.19:0,57,854	0/0:29,0:29:87.29:0,87,1303	0/0:29,0:29:84.28:0,84,1259	1/1:2,26:28:36.69:951,37,0	1/1:0,33:33:93.30:1207,93,0	1/1:3,5:8:12.04:156,12,0
chr10	7177867	.	C	CA	5141.25	PASS	AB=0.941;AC=45;AF=0.804;AN=56;BaseQRankSum=6.304;DP=425;FS=9.799;HRun=2;HaplotypeScore=137.6611;InbreedingCoeff=0.7501;MQ=37.50;MQ0=48;MQRankSum=-5.666;QD=15.44;ReadPosRankSum=-3.727;VQSLOD=2.9418;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:23,6:18:39.02:271,39,0	1/1:6,0:6:16.90:98,17,0	0/0:28,0:11:21.18:0,21,287	0/0:29,0:13:33.08:0,33,393	1/1:20,1:16:25.98:227,26,0	1/1:16,3:18:41.78:406,42,0	1/1:9,5:12:35.87:335,36,0	1/1:18,1:13:27.09:360,27,0	1/1:4,5:9:26.84:233,27,0	1/1:15,1:14:37.31:372,37,0	1/1:7,2:7:11.95:120,12,0	1/1:14,0:14:26.02:223,26,0	1/1:15,1:11:5.68:142,6,0	1/1:9,3:7:17.60:190,18,0	1/1:19,1:18:11.29:151,11,0	1/1:10,2:11:30.77:269,31,0	1/1:6,4:8:23.66:178,24,0	1/1:6,0:4:11.93:136,12,0	1/1:17,0:15:11.88:89,12,0	1/1:12,3:14:14.46:309,14,0	1/1:2,1:1:3.01:40,3,0	1/1:14,0:14:22.53:164,23,0	0/1:15,1:14:17.96:121,0,18	1/1:13,2:9:19.26:224,19,0	1/1:12,8:19:51.40:483,51,0	0/0:18,0:17:30.54:0,31,459	0/0:11,0:10:12.33:0,12,276	0/0:6,0:4:3.01:0,3,49
chr10	7177868	.	AC	A	5338.59	PASS	AB=0.740;AC=46;AF=0.821;AN=56;BaseQRankSum=6.736;DP=408;FS=3.121;HRun=1;HaplotypeScore=128.9861;InbreedingCoeff=0.3290;MQ=37.20;MQ0=48;MQRankSum=-4.964;QD=15.17;ReadPosRankSum=-2.703;VQSLOD=3.9792;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,13:17:36.09:265,36,0	1/1:0,4:6:17.78:117,18,0	0/0:28,0:11:21.18:0,21,287	0/0:28,0:12:33.08:0,33,393	1/1:3,10:16:25.98:227,26,0	1/1:10,7:16:38.91:407,39,0	1/1:7,7:12:35.98:361,36,0	1/1:7,11:12:27.09:360,27,0	1/1:6,3:9:26.98:286,27,0	1/1:1,10:14:41.92:455,42,0	1/1:4,4:7:11.95:120,12,0	1/1:2,6:14:26.78:237,27,0	0/1:4,6:10:6.01:180,0,6	1/1:4,4:7:18.01:206,18,0	1/1:2,10:18:24.18:182,24,0	1/1:3,7:9:24.88:245,25,0	1/1:9,2:8:23.71:196,24,0	1/1:2,3:4:12.04:153,12,0	1/1:11,2:11:6:59,6,0	0/1:7,6:12:6.60:263,0,7	1/1:1,2:1:3.01:40,3,0	1/1:3,4:14:22.53:164,23,0	0/1:5,6:13:17.96:121,0,18	1/1:5,7:9:18.67:211,19,0	1/1:11,8:18:48.40:452,48,0	0/1:17,1:17:8.88:9,0,333	0/1:10,1:10:2.42:2,0,264	0/1:3,2:3:22.03:22,0,32
chr10	7177870	.	AC	A	781.54	PASS	AB=0.953;AC=28;AF=0.500;AN=56;BaseQRankSum=9.700;DP=405;FS=2.191;HRun=1;HaplotypeScore=145.6671;InbreedingCoeff=0.4587;MQ=36.59;MQ0=50;MQRankSum=-6.447;QD=3.62;ReadPosRankSum=2.625;VQSLOD=0.5628;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:28,2:19:12.49:64,12,0	1/1:6,0:6:4.73:14,5,0	0/0:27,0:11:18.99:0,19,280	0/0:26,0:11:30.07:0,30,360	0/0:21,0:15:2.58:0,3,6	1/1:13,4:16:28.05:165,28,0	1/1:9,5:12:21.76:108,22,0	0/0:18,0:12:4.08:0,4,39	1/1:4,5:9:23.94:112,24,0	1/1:16,0:14:21.81:68,22,0	0/0:9,0:7:0.84:0,1,2	0/1:14,0:14:1.33:2,0,1	0/1:16,0:11:20.07:33,0,20	1/1:11,0:6:0.68:6,1,0	1/1:20,0:18:1.67:6,2,0	1/1:8,2:9:19.74:84,20,0	1/1:5,5:7:6.28:52,6,0	1/1:6,0:4:4.63:17,5,0	0/0:12,0:10:0.16:0,0,223	0/1:10,3:11:17.47:62,0,17	0/0:3,0:1:0.89:0,1,2	0/0:14,0:14:0.35:0,0,1	0/0:15,0:13:4.31:0,4,41	0/0:15,0:9:2.92:0,3,20	1/1:13,6:18:36.84:151,37,0	0/0:18,0:17:13.48:0,13,356	0/0:11,0:10:18.78:0,19,296	0/1:5,0:3:6.68:7,0,33
chr10	7177880	.	AC	A	1445.78	PASS	AB=0.899;AC=22;AF=0.458;AN=48;BaseQRankSum=7.971;DP=316;FS=5.227;HRun=1;HaplotypeScore=141.1186;InbreedingCoeff=0.5118;MQ=30.20;MQ0=40;MQRankSum=-3.623;QD=11.04;ReadPosRankSum=2.820;VQSLOD=2.2108;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:19:0.19:0,0,19	1/1:2,1:3:4.41:14,4,0	0/0:18,0:5:5.23:0,5,108	0/0:18,0:5:15:0,15,165	./.	1/1:8,6:12:19.72:238,20,0	1/1:7,6:11:26.86:270,27,0	./.	1/1:6,1:7:17.16:144,17,0	1/1:5,1:6:14.10:63,14,0	./.	0/0:14,0:14:3.81:0,4,88	0/1:14,0:10:5.83:6,0,93	0/0:7,0:4:8.39:0,8,83	1/1:11,0:11:6.72:28,7,0	1/1:3,7:9:21.04:223,21,0	1/1:9,2:7:14.68:106,15,0	0/1:4,0:2:6.77:7,0,20	0/1:9,1:8:5.23:5,0,168	0/1:6,5:10:25.19:161,0,25	./.	0/0:14,0:14:3.01:0,3,38	0/0:12,2:12:7.42:0,7,52	0/0:11,1:8:9.24:0,9,98	1/1:9,8:17:35.97:354,36,0	0/0:21,0:20:23.40:0,23,415	0/0:14,0:13:26.92:0,27,310	0/0:6,0:4:7.38:0,7,55
chr10	7177882	.	AC	A	669.32	PASS	AB=0.952;AC=21;AF=0.438;AN=48;BaseQRankSum=7.308;DP=307;FS=3.174;HRun=1;HaplotypeScore=142.7257;InbreedingCoeff=0.4841;MQ=29.33;MQ0=39;MQRankSum=-2.566;QD=5.40;ReadPosRankSum=1.603;VQSLOD=0.7416;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:19:0.28:0,0,20	1/1:3,0:3:4.53:15,5,0	0/1:16,0:4:25.50:26,0,33	0/0:16,0:4:9.03:0,9,114	./.	1/1:11,3:12:19.57:93,20,0	1/1:8,5:11:25.55:144,26,0	./.	1/1:2,5:7:7.37:78,7,0	1/1:6,0:6:13.98:50,14,0	./.	0/0:14,0:14:2.33:0,2,55	0/0:13,0:10:2.93:0,3,111	0/0:7,0:4:8.86:0,9,90	1/1:10,0:10:7.10:27,7,0	1/1:8,2:9:20.32:122,20,0	1/1:7,4:7:14.65:89,15,0	0/1:4,0:2:6.84:7,0,10	0/0:9,0:7:0.21:0,0,168	0/1:10,2:11:28.46:51,0,28	./.	0/0:14,0:14:3.01:0,3,38	0/0:12,0:11:5.61:0,6,47	0/0:10,0:7:7.37:0,7,76	1/1:13,5:18:29.83:138,30,0	0/0:20,0:19:24.63:0,25,426	0/0:14,0:13:26.86:0,27,299	0/0:6,0:4:7.84:0,8,58
chr10	7177884	.	AC	A	725.48	PASS	AB=0.918;AC=23;AF=0.479;AN=48;BaseQRankSum=7.104;DP=299;FS=3.236;HRun=1;HaplotypeScore=142.5672;InbreedingCoeff=0.4813;MQ=29.21;MQ0=38;MQRankSum=-3.326;QD=5.00;ReadPosRankSum=1.103;VQSLOD=0.5859;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:19:0.28:0,0,20	1/1:2,1:3:4.72:17,5,0	0/1:13,0:3:13.81:14,0,33	0/0:13,0:3:6.02:0,6,76	./.	1/1:8,4:12:13.24:49,13,0	1/1:7,3:11:24.48:148,24,0	./.	1/1:8,1:8:6.87:113,7,0	1/1:5,1:6:15.89:88,16,0	./.	0/1:13,0:13:1.46:1,0,35	0/0:12,0:9:6:0,6,95	0/0:7,0:4:8.86:0,9,89	1/1:10,0:10:7.38:32,7,0	1/1:4,5:9:19.21:124,19,0	1/1:9,2:7:14.84:108,15,0	0/1:4,0:2:0.15:8,0,0	0/1:8,1:7:2.56:3,0,160	0/1:6,4:10:29.46:55,0,29	./.	0/0:14,0:14:3.01:0,3,38	0/0:10,0:11:5.61:0,6,46	0/0:9,0:7:6.21:0,6,60	1/1:11,5:18:26.18:130,26,0	0/0:20,0:19:24.62:0,25,439	0/0:14,0:13:26.92:0,27,315	0/0:6,0:4:8.35:0,8,76
chr10	7177930	.	AG	A	3910.87	PASS	AB=0.817;AC=34;AF=0.654;AN=52;BaseQRankSum=-3.116;DP=603;FS=13.137;HRun=2;HaplotypeScore=144.4629;InbreedingCoeff=-0.0520;MQ=48.47;MQ0=72;MQRankSum=0.590;QD=8.37;ReadPosRankSum=-2.449;VQSLOD=-0.4458;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:31,4:31:27.87:253,28,0	1/1:7,3:6:9.02:103,9,0	0/0:42,0:14:26.38:0,26,290	0/0:50,0:14:32.53:0,33,340	0/1:26,2:24:0:0,0,0	1/1:6,12:11:3.63:119,4,0	1/1:3,17:16:29.72:358,30,0	0/1:47,5:47:99:856,0,392	0/1:13,5:13:30.48:67,0,30	0/1:27,2:25:77.15:492,0,77	./.	0/1:16,9:24:33.67:154,0,34	0/1:20,3:23:69.46:141,0,69	0/1:9,3:11:50.30:50,0,55	1/1:22,2:23:10.51:52,11,0	1/1:6,11:10:16.08:182,16,0	0/1:7,7:6:23.94:39,0,24	1/1:8,1:9:7.25:62,7,0	0/1:10,7:15:99:195,0,187	1/1:9,17:20:20.89:249,21,0	./.	1/1:11,8:19:7.40:56,7,0	0/1:10,7:15:11.59:63,0,12	0/1:7,4:10:17.17:69,0,17	1/1:7,13:18:8.72:114,9,0	0/1:18,0:16:99:159,0,148	0/0:13,1:13:5.24:0,5,79	1/1:1,4:2:6.02:76,6,0
chr10	7177931	.	G	GA	4251.81	PASS	AB=0.742;AC=38;AF=0.731;AN=52;BaseQRankSum=-3.007;DP=579;FS=9.344;HRun=1;HaplotypeScore=131.3859;InbreedingCoeff=0.0864;MQ=50.58;MQ0=71;MQRankSum=2.008;QD=9.64;ReadPosRankSum=-1.504;VQSLOD=1.4501;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:32,1:30:39.80:307,40,0	1/1:4,4:5:9.02:103,9,0	0/0:43,0:14:29.42:0,29,300	0/0:52,0:15:32.25:0,32,343	0/1:9,15:21:0:0,0,0	1/1:14,2:9:3.63:119,4,0	1/1:17,3:16:29.88:374,30,0	0/1:18,31:45:99:986,0,330	0/1:10,6:11:25.86:67,0,26	0/1:9,19:24:39.87:544,0,40	./.	1/1:18,3:21:1.31:160,1,0	0/1:20,2:22:12.08:162,0,12	1/1:11,1:11:0.32:74,0,0	1/1:7,15:21:10.56:74,11,0	1/1:15,2:10:16.29:183,16,0	0/1:12,1:5:23.94:39,0,24	1/1:1,8:9:6.02:89,6,0	0/1:15,1:14:99:193,0,162	1/1:21,4:20:21.02:249,21,0	./.	1/1:13,4:17:7.39:43,7,0	1/1:13,3:14:2.30:62,2,0	1/1:8,1:8:3.31:76,3,0	1/1:18,2:17:9.03:114,9,0	0/1:6,11:15:99:159,0,144	0/0:7,7:13:5.24:0,5,77	1/1:5,0:2:6.02:76,6,0
chr10	7177944	.	G	GAGAA	4196.12	PASS	AB=1.000;AC=17;AF=0.315;AN=54;BaseQRankSum=1.188;DP=574;FS=8.008;HRun=0;HaplotypeScore=136.2991;InbreedingCoeff=0.6432;MQ=58.53;MQ0=63;MQRankSum=-3.331;QD=21.85;ReadPosRankSum=2.001;VQSLOD=3.2524;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:30:74.98:1095,75,0	0/0:7,0:3:2.94:0,3,18	0/0:51,0:22:52.91:0,53,643	0/0:55,0:17:35.11:0,35,520	0/0:19,0:15:2.98:0,3,25	0/1:13,0:7:1.42:1,0,56	0/0:23,0:19:28.37:0,28,215	0/0:46,0:41:52.28:0,52,538	0/0:15,0:10:2.77:0,3,18	0/0:27,0:23:13.87:0,14,247	./.	1/1:16,7:22:39:607,39,0	1/1:14,8:22:39.68:949,40,0	1/1:11,4:14:23.98:508,24,0	0/1:21,0:21:13.81:14,0,19	0/0:18,0:11:23.87:0,24,187	0/0:12,0:7:3.88:0,4,55	0/0:12,0:12:10.33:0,10,71	0/0:16,0:14:14.86:0,15,216	0/1:24,0:19:6.07:6,0,110	0/0:17,0:13:14.98:0,15,125	1/1:14,1:15:11.95:197,12,0	1/1:15,2:17:29.91:409,30,0	1/1:7,2:8:23.94:410,24,0	0/0:15,0:13:8.58:0,9,62	0/0:18,0:16:6.73:0,7,177	0/0:14,0:13:11.93:0,12,92	0/0:7,0:4:11.98:0,12,97
chr10	7178021	.	CGT	C	4850.94	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=11.543;DP=639;FS=0.808;HRun=0;HaplotypeScore=139.0997;InbreedingCoeff=0.9960;MQ=74.47;MQ0=6;MQRankSum=-3.762;QD=38.50;ReadPosRankSum=1.355;VQSLOD=6.4542;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:47:99:0,130,1352	0/0:10,0:8:24.08:0,24,439	0/0:24,0:24:60.12:0,60,1006	0/0:23,0:22:53.54:0,54,964	0/0:12,0:11:26.99:0,27,505	0/0:19,0:19:47.56:0,48,514	0/0:29,0:29:52.48:0,52,746	0/0:33,0:32:90.31:0,90,1650	0/0:15,0:14:39.10:0,39,441	0/0:28,0:28:84.24:0,84,1509	0/0:14,0:14:42.14:0,42,770	1/1:1,25:26:72.24:1058,72,0	1/1:0,21:21:57.19:833,57,0	1/1:0,23:23:66.22:935,66,0	0/0:27,0:27:72.10:0,72,1279	0/0:24,0:23:69.09:0,69,730	0/0:31,0:30:78.18:0,78,838	0/0:20,0:20:48.16:0,48,896	0/0:15,0:15:41.56:0,42,431	0/0:17,0:17:39.57:0,40,418	0/0:46,0:46:99:0,132,2432	1/1:0,17:17:48.16:685,48,0	1/1:1,10:11:30.10:436,30,0	1/1:0,28:28:63.17:903,63,0	0/0:23,0:23:57.11:0,57,584	0/0:26,0:26:75.25:0,75,1366	0/0:23,0:23:60.21:0,60,1108	0/0:6,0:5:15.05:0,15,257
chr10	7178254	.	C	CA	14630.65	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=11.882;DP=666;FS=0.945;HRun=2;HaplotypeScore=83.8166;InbreedingCoeff=0.9953;MQ=77.31;MQ0=0;MQRankSum=0.854;QD=37.90;ReadPosRankSum=2.152;VQSLOD=5.4407;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,53:55:99:2201,154,0	0/0:5,0:5:12.04:0,12,148	0/0:13,0:13:33.10:0,33,408	0/0:18,0:18:41.74:0,42,492	0/0:24,0:24:56.83:0,57,665	1/1:1,21:22:60.20:863,60,0	1/1:3,19:22:54.18:777,54,0	0/0:29,0:29:78.22:0,78,936	1/1:0,20:20:54.11:752,54,0	0/0:22,0:22:66.21:0,66,818	0/0:11,0:11:33.10:0,33,409	1/1:0,27:27:75.25:1079,75,0	1/1:3,20:23:54.18:777,54,0	1/1:1,31:32:84.28:1208,84,0	0/0:40,0:40:99:0,114,1400	1/1:0,23:23:66.22:950,66,0	1/1:0,42:42:99:1727,120,0	0/0:20,0:20:60.12:0,60,710	1/1:0,9:9:27.09:389,27,0	1/1:1,31:32:90.13:1199,90,0	0/0:24,0:24:69.18:0,69,839	1/1:3,18:21:51.17:733,51,0	1/1:0,12:12:27.05:364,27,0	1/1:0,24:24:63.21:907,63,0	1/1:0,22:22:51.13:704,51,0	0/0:33,0:33:93.27:0,93,1130	0/0:32,0:32:87.27:0,87,1077	0/0:9,0:9:27.08:0,27,334
chr10	7178534	.	TAAC	T	1606.11	PASS	AB=0.990;AC=19;AF=0.339;AN=56;BaseQRankSum=6.001;DP=756;FS=39.792;HRun=0;HaplotypeScore=212.5457;InbreedingCoeff=-0.3766;MQ=45.84;MQ0=75;MQRankSum=0.225;QD=3.15;ReadPosRankSum=3.236;VQSLOD=1.1385;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:29,2:27:99:154,0,372	0/0:8,0:8:21.07:0,21,471	0/0:43,0:9:5.98:0,6,87	0/0:27,0:10:21.01:0,21,272	0/0:22,0:18:48.16:0,48,1084	0/1:38,0:35:99:137,0,480	0/1:26,0:15:32.14:32,0,270	0/0:39,0:30:72.71:0,73,1435	0/1:41,0:34:99:130,0,317	0/0:26,0:23:63.22:0,63,1322	0/0:17,0:15:42.13:0,42,872	0/1:32,1:31:99:159,0,311	0/1:30,0:30:99:101,0,201	0/1:30,0:28:79.31:79,0,466	0/0:31,0:31:87.30:0,87,1962	0/1:38,0:36:99:113,0,616	0/1:24,0:21:39.76:40,0,446	0/0:16,0:16:45.13:0,45,941	0/1:17,0:13:45.13:45,0,244	0/1:36,0:36:99:125,0,702	0/0:17,0:17:43.03:0,43,949	0/1:50,0:49:99:186,0,658	0/1:22,2:23:99:148,0,258	0/1:18,0:17:79.31:79,0,173	0/1:38,0:37:99:105,0,619	0/1:19,0:17:70.63:71,0,88	0/1:12,0:11:39.40:39,0,84	1/1:5,0:5:9.08:27,9,0
chr10	7178537	.	CA	C	9181.76	PASS	AB=0.642;AC=19;AF=0.339;AN=56;BaseQRankSum=2.579;DP=744;FS=41.643;HRun=2;HaplotypeScore=164.0337;InbreedingCoeff=-0.3746;MQ=44.27;MQ0=80;MQRankSum=-0.159;QD=18.25;ReadPosRankSum=2.073;VQSLOD=1.9413;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:16,14:26:99:439,0,294	0/0:8,0:8:21.07:0,21,314	0/0:40,2:6:3.01:0,3,45	0/0:28,0:9:15.03:0,15,181	0/0:20,0:16:48.16:0,48,720	0/1:14,24:35:99:805,0,321	0/1:10,14:13:99:272,0,185	0/0:36,0:26:75.24:0,75,1099	0/1:19,22:35:99:678,0,320	0/0:26,0:23:48.19:0,48,897	0/0:17,0:15:45.10:0,45,629	0/1:11,20:32:99:698,0,221	0/1:9,21:30:99:738,0,140	0/1:14,16:29:99:538,0,375	0/0:30,0:30:87.29:0,87,1301	0/1:18,18:35:99:564,0,485	0/1:13,11:21:99:364,0,343	0/0:17,0:17:42.14:0,42,626	0/1:11,6:14:99:193,0,224	0/1:13,23:36:99:752,0,475	0/0:17,0:17:24.61:0,25,609	0/1:19,31:50:99:948,0,519	0/1:12,13:24:99:418,0,188	0/1:5,13:17:99:369,0,129	0/1:17,19:35:99:631,0,482	0/1:5,11:14:50.80:387,0,51	0/1:4,5:8:65.69:194,0,66	1/1:0,5:5:15.05:194,15,0
chr10	7178556	.	C	CA	3949.73	PASS	AB=0.847;AC=16;AF=0.308;AN=52;BaseQRankSum=0.343;DP=835;FS=78.616;HRun=2;HaplotypeScore=243.4620;InbreedingCoeff=-0.4358;MQ=41.16;MQ0=96;MQRankSum=-3.809;QD=6.72;ReadPosRankSum=4.898;VQSLOD=-0.5874;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:30,3:25:21.38:21,0,750	0/0:10,0:10:27.08:0,27,353	./.	./.	0/0:23,0:20:54.10:0,54,727	0/1:35,15:47:99:459,0,783	0/1:22,6:16:99:158,0,194	0/0:23,0:13:36.12:0,36,503	0/1:30,19:42:99:391,0,701	0/0:31,0:26:71.93:0,72,994	0/0:16,0:14:42.14:0,42,574	0/1:29,4:32:99:151,0,748	0/1:28,1:32:28.81:29,0,825	0/1:28,3:34:99:165,0,684	0/0:28,0:28:81.27:0,81,1124	0/1:27,14:38:99:530,0,476	0/1:15,13:24:99:422,0,381	0/0:15,0:15:39.13:0,39,543	0/1:19,9:16:99:266,0,261	0/1:29,14:43:99:522,0,592	0/0:18,0:17:37.80:0,38,531	0/1:49,6:58:99:268,0,1303	0/1:40,3:35:72.92:73,0,861	0/0:29,0:24:68.92:0,69,883	0/1:31,18:45:99:451,0,694	0/1:16,0:12:1.06:1,0,116	0/0:11,0:8:5.30:0,5,136	0/1:6,0:6:42.12:42,0,105
chr10	7178591	.	ACTC	A	4591.50	PASS	AB=0.882;AC=15;AF=0.268;AN=56;BaseQRankSum=6.818;DP=965;FS=14.523;HRun=0;HaplotypeScore=265.2788;InbreedingCoeff=-0.3595;MQ=39.51;MQ0=105;MQRankSum=-10.652;QD=6.56;ReadPosRankSum=3.890;VQSLOD=2.6005;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:43,4:29:99:162,0,836	0/0:11,0:11:33.11:0,33,521	0/0:20,0:7:21.07:0,21,332	0/0:17,0:5:15.05:0,15,229	0/0:27,0:23:69.23:0,69,1067	0/1:44,9:47:99:406,0,1333	0/1:29,5:18:99:116,0,508	0/0:31,0:31:93.32:0,93,1427	0/1:40,3:34:99:110,0,1100	0/0:23,0:19:56.93:0,57,909	0/0:22,0:20:57.19:0,57,913	0/1:36,6:35:99:263,0,744	0/1:36,4:30:99:100,0,709	0/1:38,4:32:99:187,0,718	0/0:26,0:23:66.22:0,66,1061	0/1:40,10:44:99:552,0,1306	0/1:34,2:29:57.89:58,0,1214	0/0:23,0:20:54.18:0,54,865	0/1:27,1:15:5.11:5,0,758	0/1:39,19:50:99:883,0,1173	0/0:16,0:14:37.21:0,37,514	0/1:64,18:68:99:867,0,1119	0/1:48,8:41:99:278,0,1006	0/1:30,2:21:83.60:84,0,571	0/1:44,12:50:99:521,0,1615	0/0:15,0:10:27.09:0,27,430	0/0:21,0:18:51.17:0,51,794	0/0:13,0:13:27.09:0,27,415
chr10	7178647	.	C	CA	2597.49	PASS	AB=0.753;AC=8;AF=0.143;AN=56;BaseQRankSum=-6.299;DP=869;FS=8.418;HRun=2;HaplotypeScore=212.7985;InbreedingCoeff=-0.1752;MQ=42.52;MQ0=95;MQRankSum=5.330;QD=13.74;ReadPosRankSum=-2.032;VQSLOD=1.7724;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:36:60.19:0,60,808	0/1:8,2:10:60.57:61,0,302	0/0:11,0:3:3.01:0,3,42	0/0:13,0:4:8.79:0,9,122	0/1:20,15:32:99:560,0,581	0/0:32,0:26:37.24:0,37,615	0/0:43,0:27:41.53:0,42,433	0/0:18,0:9:27.07:0,27,357	0/0:35,0:32:65.40:0,65,723	0/1:10,19:29:99:806,0,290	0/1:10,4:13:99:142,0,338	0/0:40,0:34:83.89:0,84,955	0/0:42,0:32:84.77:0,85,1018	0/0:27,0:18:39.23:0,39,490	0/1:19,14:30:99:498,0,543	0/0:33,0:30:62.95:0,63,660	0/0:29,0:25:38.51:0,39,658	0/1:16,6:19:99:215,0,448	0/1:25,0:11:9.34:9,0,315	0/0:66,0:54:87.04:0,87,1186	0/1:8,12:19:99:441,0,199	0/0:47,0:32:70.04:0,70,923	0/0:45,0:32:55.63:0,56,665	0/0:33,0:21:41.78:0,42,522	0/0:36,0:30:82.49:0,82,1048	0/0:29,1:26:32.79:0,33,989	0/0:33,0:31:90.28:0,90,1236	0/0:14,0:13:27.05:0,27,327
chr10	7178652	.	ACT	A	1421.47	PASS	AB=0.870;AC=11;AF=0.196;AN=56;BaseQRankSum=-5.242;DP=833;FS=11.755;HRun=0;HaplotypeScore=215.0266;InbreedingCoeff=-0.2512;MQ=43.46;MQ0=82;MQRankSum=1.660;QD=4.53;ReadPosRankSum=-5.027;VQSLOD=0.8202;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:38:63.32:0,63,1109	0/1:6,4:10:99:193,0,194	0/0:10,0:4:12.04:0,12,220	0/0:19,0:11:27.56:0,28,462	0/1:27,4:28:99:311,0,871	0/0:29,0:23:59.54:0,60,968	0/1:40,3:28:99:120,0,476	0/1:12,5:11:99:190,0,193	0/0:35,0:32:71.91:0,72,1106	0/1:29,3:31:42.21:42,0,1363	0/1:13,1:13:96.36:96,0,450	0/0:34,0:30:36.68:0,37,872	0/0:36,1:28:7.09:0,7,762	0/0:24,0:17:34.39:0,34,519	0/1:25,8:30:99:266,0,1052	0/0:32,1:30:18.77:0,19,816	0/1:27,2:25:18.92:19,0,858	0/1:18,4:19:99:188,0,609	0/0:24,0:11:33.11:0,33,582	0/1:60,3:51:42.71:43,0,1213	0/1:17,3:19:99:101,0,691	0/0:45,0:31:64.90:0,65,1074	0/0:40,0:28:33.38:0,33,624	0/0:30,0:20:30.36:0,30,500	0/0:32,1:28:30.53:0,31,1132	0/0:27,0:24:69.24:0,69,1225	0/0:31,0:30:90.31:0,90,1600	0/0:14,0:13:18.06:0,18,316
chr10	7178660	.	TCTAACTCTAACTCTAACTCTAACTCTAA	T	5622.82	PASS	AB=0.983;AC=16;AF=0.286;AN=56;BaseQRankSum=-6.474;DP=775;FS=46.543;HRun=0;HaplotypeScore=490.1766;InbreedingCoeff=-0.3897;MQ=45.14;MQ0=66;MQRankSum=-4.178;QD=10.85;ReadPosRankSum=-7.587;VQSLOD=-0.1179;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:50,0:37:99:219,0,385	0/1:8,0:8:1.03:1,0,216	0/0:8,0:5:15.04:0,15,197	0/0:17,0:15:39.69:0,40,445	0/0:27,0:24:57.56:0,58,1050	0/1:30,0:24:99:454,0,218	0/1:43,0:31:99:366,0,359	0/0:18,0:13:31.35:0,31,442	0/1:35,0:32:43.93:1032,0,44	0/0:31,0:30:83.77:0,84,1440	0/0:12,0:11:30.10:0,30,608	0/1:34,0:30:99:295,0,250	0/1:33,0:24:99:209,0,424	0/1:22,0:16:99:172,0,351	0/0:36,0:33:72.25:0,72,1380	0/1:31,0:28:99:376,0,179	0/1:27,0:23:79.91:780,0,80	0/0:19,0:16:33.06:0,33,646	0/1:26,0:11:99:367,0,157	0/1:38,22:47:99:475,0,729	0/0:21,0:21:51.05:0,51,780	0/1:37,0:26:99:145,0,327	0/1:31,0:23:99:117,0,393	0/1:22,0:16:99:174,0,246	0/1:29,0:24:99:441,0,550	0/0:28,0:25:68.82:0,69,1896	0/0:29,0:29:56.66:0,57,1567	0/0:11,0:10:9.03:0,9,239
chr10	7178671	.	C	CA	502.68	PASS	AB=0.820;AC=7;AF=0.125;AN=56;BaseQRankSum=-1.186;DP=749;FS=5.807;HRun=2;HaplotypeScore=175.4369;InbreedingCoeff=-0.1449;MQ=48.49;MQ0=50;MQRankSum=-0.136;QD=3.40;ReadPosRankSum=-2.661;VQSLOD=-0.7427;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:42,1:37:6.77:0,7,509	0/1:7,1:8:24.95:25,0,182	0/0:17,0:14:33.11:0,33,457	0/0:22,0:20:60.19:0,60,800	0/1:20,5:23:66.76:67,0,727	0/0:24,0:19:51.08:0,51,669	0/0:41,0:33:24.77:0,25,729	0/0:24,0:19:35.95:0,36,713	0/0:37,0:34:78.66:0,79,1056	0/1:30,5:35:96.63:97,0,1059	0/1:6,6:11:99:186,0,219	0/0:34,0:31:5.74:0,6,749	0/0:31,0:22:65.65:0,66,864	0/0:23,0:19:21.67:0,22,523	0/1:23,8:28:99:146,0,764	0/0:30,0:28:30.03:0,30,395	0/0:29,0:26:74.28:0,74,1008	0/1:10,6:13:99:104,0,303	0/0:28,0:15:45.10:0,45,605	0/0:50,0:39:70.76:0,71,947	0/0:23,1:23:17.44:0,17,786	0/0:29,0:23:65.65:0,66,857	0/0:27,0:22:38.63:0,39,527	0/1:20,1:17:2.89:3,0,378	0/0:24,0:21:60.66:0,61,822	0/0:29,0:26:78.19:0,78,1020	0/0:25,0:25:75.25:0,75,1047	0/0:10,0:9:18.02:0,18,198
chr10	7178672	.	T	TCTAA	525.15	PASS	AB=0.970;AC=6;AF=0.107;AN=56;BaseQRankSum=-0.103;DP=743;FS=4.766;HRun=0;HaplotypeScore=208.5189;InbreedingCoeff=0.2319;MQ=48.80;MQ0=48;MQRankSum=0.987;QD=6.25;ReadPosRankSum=-3.144;VQSLOD=2.2678;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:36:25.90:0,26,490	0/1:7,0:7:0.18:0,0,194	0/0:17,0:14:36.09:0,36,487	0/0:23,0:21:58.44:0,58,708	0/0:25,0:23:24.05:0,24,899	0/0:24,0:19:47.05:0,47,640	0/0:41,0:33:50.25:0,50,807	0/0:24,0:19:57.07:0,57,860	0/0:36,0:33:74.26:0,74,1152	0/0:35,0:35:40.19:0,40,1389	0/1:12,0:11:33.86:34,0,281	0/0:34,0:31:47.12:0,47,678	0/0:31,0:22:61.05:0,61,899	0/0:21,0:19:39.12:0,39,626	0/0:31,0:28:1.95:0,2,992	0/0:30,0:28:21.31:0,21,320	0/0:29,0:26:51.64:0,52,987	0/0:16,0:13:2.35:0,2,407	0/0:28,0:15:42.06:0,42,578	0/0:49,0:38:57.26:0,57,742	0/0:24,0:23:57.73:0,58,1058	0/0:28,0:23:56.88:0,57,800	0/0:27,0:22:38.91:0,39,571	0/0:21,0:17:34.42:0,34,418	0/0:23,0:20:55.69:0,56,765	0/1:25,4:26:99:366,0,813	0/1:26,0:26:0.95:1,0,925	1/1:4,6:9:9.03:231,9,0
chr10	7178676	.	ACT	A	144.67	PASS	AB=0.933;AC=3;AF=0.054;AN=56;BaseQRankSum=1.007;DP=754;FS=0.847;HRun=0;HaplotypeScore=191.9203;InbreedingCoeff=0.4986;MQ=53.12;MQ0=40;MQRankSum=0.172;QD=4.13;ReadPosRankSum=-3.230;VQSLOD=2.6015;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,1:38:33.23:0,33,530	0/0:6,0:6:18.06:0,18,309	0/0:22,0:19:36.40:0,36,879	0/0:28,0:26:74.77:0,75,1098	0/0:25,0:23:69.23:0,69,1216	0/0:23,0:19:51.17:0,51,855	0/0:40,0:34:62.25:0,62,1067	0/0:30,0:25:75.26:0,75,1301	0/0:38,0:35:83.57:0,84,1288	0/0:37,0:37:98.27:0,98,1780	0/0:12,0:11:11.07:0,11,385	0/0:32,1:31:7.70:0,8,758	0/0:28,1:22:59.93:0,60,934	0/0:23,0:21:37.61:0,38,600	0/0:34,0:31:89.79:0,90,1516	0/0:30,0:28:29.82:0,30,371	0/0:32,0:29:78.94:0,79,1246	0/0:16,0:13:35.15:0,35,591	0/0:28,0:16:42.09:0,42,673	0/0:45,0:37:68.71:0,69,1000	0/0:25,0:24:60.73:0,61,1148	0/0:27,0:23:55.43:0,55,852	0/0:27,0:23:38.86:0,39,583	0/0:23,0:19:44.12:0,44,598	0/0:21,0:19:57.19:0,57,944	0/1:26,2:27:99:128,0,1071	0/0:21,2:23:5.06:0,5,1052	1/1:7,0:6:9.03:114,9,0
chr10	7178684	.	TCTAA	T	8645.94	PASS	AB=0.805;AC=22;AF=0.393;AN=56;BaseQRankSum=-2.217;DP=752;FS=22.687;HRun=0;HaplotypeScore=190.5434;InbreedingCoeff=-0.0938;MQ=63.32;MQ0=16;MQRankSum=-7.896;QD=18.16;ReadPosRankSum=0.304;VQSLOD=2.7996;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:11,29:37:80.08:139,0,80	0/0:10,0:10:27.09:0,27,397	0/0:30,0:27:81.22:0,81,1138	0/0:34,0:32:82.91:0,83,1112	0/0:25,0:25:66.21:0,66,1128	0/1:20,0:18:99:385,0,122	1/1:39,0:37:15.21:860,15,0	0/0:25,0:25:71.36:0,71,1056	1/1:25,10:35:27.44:1170,27,0	0/0:42,0:42:29.51:0,30,1664	0/1:12,0:12:19.11:19,0,325	0/1:10,23:33:81.97:623,0,82	0/1:23,5:26:99:725,0,168	0/1:9,18:27:62.98:239,0,63	0/0:36,0:36:90.28:0,90,1417	0/1:7,22:29:99:185,0,100	1/1:28,2:30:2.34:1238,2,0	0/0:16,0:16:36.11:0,36,598	0/1:19,2:16:78.28:383,0,78	0/1:39,0:37:99:477,0,399	0/0:29,0:28:75.25:0,75,1194	0/1:19,7:22:34.30:648,0,34	0/1:11,12:23:33.56:178,0,34	0/1:18,5:21:18.46:676,0,18	0/1:18,2:20:99:524,0,205	0/1:28,0:28:78.92:79,0,894	0/0:29,0:29:81.27:0,81,1212	1/1:3,0:3:9.02:99,9,0
chr10	7178688	.	A	ACT	9365.16	PASS	AB=0.911;AC=24;AF=0.444;AN=54;BaseQRankSum=-0.313;DP=749;FS=18.588;HRun=0;HaplotypeScore=164.2876;InbreedingCoeff=0.0796;MQ=68.21;MQ0=8;MQRankSum=-7.956;QD=19.93;ReadPosRankSum=1.240;VQSLOD=3.7721;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:39,0:37:80.43:137,0,80	0/0:9,0:9:27.09:0,27,397	0/0:34,0:31:83.93:0,84,1165	0/0:37,0:35:78.65:0,79,1160	0/0:25,0:25:69.21:0,69,974	0/1:12,8:19:22.17:465,0,22	1/1:10,26:39:19.51:944,20,0	0/0:32,0:32:84.07:0,84,1230	1/1:25,12:37:68.54:1261,69,0	0/0:43,0:43:38.64:0,39,1675	0/1:9,0:9:19.09:19,0,326	0/1:29,0:32:5.42:647,0,5	0/1:17,9:27:82.03:855,0,82	0/1:22,0:24:15.05:246,0,15	0/0:38,0:38:99:0,108,1550	0/1:26,0:27:33.73:186,0,34	1/1:5,24:32:5.41:1319,5,0	0/1:14,0:14:9.88:10,0,491	0/1:11,6:15:72.16:399,0,72	0/1:34,0:36:99:503,0,171	0/0:30,0:29:76.54:0,77,1142	1/1:19,6:24:5.73:781,6,0	1/1:20,0:21:12.79:295,13,0	1/1:12,8:19:9.81:716,10,0	0/1:13,8:21:92.93:555,0,93	0/1:26,0:26:26.47:26,0,889	0/0:31,0:31:54.17:0,54,1163	./.
chr10	7180173	.	T	TG	6232.37	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-9.546;DP=694;FS=5.372;HRun=1;HaplotypeScore=69.1689;InbreedingCoeff=0.9990;MQ=71.37;MQ0=0;MQRankSum=0.916;QD=36.45;ReadPosRankSum=3.047;VQSLOD=5.2474;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,26:26:69.17:1007,69,0	0/0:10,0:10:27.09:0,27,350	0/0:14,0:14:37.64:0,38,503	0/0:25,0:25:63.20:0,63,800	0/0:36,0:35:89.99:0,90,1153	0/0:21,0:20:54.10:0,54,663	0/0:25,0:25:57.16:0,57,711	0/0:31,0:31:87.28:0,87,1120	0/0:24,0:24:72.22:0,72,919	0/0:28,0:28:78.21:0,78,994	0/0:21,0:20:51.17:0,51,661	1/1:0,22:22:54.18:809,54,0	1/1:1,26:26:72.24:1078,72,0	1/1:0,16:16:42.14:629,42,0	0/0:30,0:30:90.27:0,90,1139	0/0:23,0:23:69.20:0,69,878	0/0:34,0:34:96.30:0,96,1232	0/0:15,0:15:42.06:0,42,495	0/0:24,0:24:66.19:0,66,829	0/0:28,0:26:75.20:0,75,949	0/0:49,0:48:99:0,141,1830	1/1:0,21:20:42.06:600,42,0	1/1:1,21:21:51.17:761,51,0	1/1:1,36:37:90.30:1349,90,0	0/0:17,0:17:39.13:0,39,506	0/0:27,0:27:81.26:0,81,1039	0/0:33,0:33:96.31:0,96,1245	0/0:8,0:8:21.03:0,21,253
chr10	7180361	.	CTCTCTG	C	1499.65	PASS	AB=0.964;AC=18;AF=0.321;AN=56;BaseQRankSum=8.113;DP=919;FS=2.341;HRun=0;HaplotypeScore=295.3719;InbreedingCoeff=0.0774;MQ=39.74;MQ0=24;MQRankSum=-5.265;QD=3.10;ReadPosRankSum=-1.925;VQSLOD=1.4915;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:36,1:34:16.16:16,0,195	0/1:23,0:23:35.14:35,0,731	0/0:18,0:3:5.80:0,6,51	0/0:37,0:11:1.86:0,2,35	0/0:41,0:40:26.69:0,27,603	1/1:28,5:30:5.39:101,5,0	0/1:16,0:15:25.99:52,0,26	0/0:53,0:44:36.55:0,37,1311	0/0:10,6:15:0.87:0,1,2	0/0:50,0:48:36.74:0,37,2132	0/0:28,0:28:18.06:0,18,535	1/1:21,1:21:14.46:152,14,0	0/1:34,0:34:99:288,0,252	0/0:23,3:25:9.36:0,9,256	0/0:41,0:38:54.18:0,54,1693	0/1:10,0:8:8.55:85,0,9	0/1:14,0:15:82.25:82,0,86	0/0:24,0:24:51.10:0,51,1277	0/1:13,7:15:82.66:338,0,83	1/1:62,4:61:7.99:270,8,0	0/0:34,0:30:35.19:0,35,966	0/1:50,3:52:53.74:54,0,321	0/1:50,1:46:37.95:38,0,301	0/0:18,0:17:3.33:0,3,99	1/1:38,3:39:10.51:140,11,0	0/1:56,0:54:16.27:16,0,2290	0/0:41,0:41:83.93:0,84,2010	0/0:7,0:7:12.04:0,12,288
chr10	7180367	.	G	GTC	4321.63	PASS	AB=0.856;AC=27;AF=0.482;AN=56;BaseQRankSum=7.553;DP=900;FS=1.430;HRun=0;HaplotypeScore=260.4819;InbreedingCoeff=0.5180;MQ=37.93;MQ0=23;MQRankSum=-0.262;QD=8.97;ReadPosRankSum=2.286;VQSLOD=4.1180;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,25:34:13.10:312,13,0	0/1:21,0:21:35.16:35,0,371	0/0:14,0:3:5.80:0,6,51	0/0:36,0:9:0.05:0,0,32	0/0:38,1:38:27.09:0,27,368	1/1:22,11:30:5.22:77,5,0	0/1:9,3:11:25.99:56,0,26	0/0:53,0:43:40.07:0,40,1141	1/1:12,3:14:0.54:2,1,0	0/0:52,1:49:42.78:0,43,1260	0/0:26,0:25:18.06:0,18,249	1/1:12,12:21:21.23:324,21,0	1/1:17,22:37:4.65:761,5,0	1/1:7,18:24:21.04:372,21,0	0/0:40,0:36:53.63:0,54,741	1/1:5,7:10:11.90:193,12,0	0/1:12,2:14:66.65:86,0,67	0/0:23,0:23:49.80:0,50,635	0/1:21,2:18:75.33:482,0,75	0/1:34,29:57:1.50:317,0,1	0/0:28,0:25:43.37:0,43,561	1/1:28,25:49:35.50:638,36,0	1/1:20,32:47:19.15:419,19,0	1/1:4,13:17:8.51:113,9,0	1/1:24,17:39:6.92:133,7,0	0/0:58,1:57:10.74:0,11,1318	0/0:37,3:40:83.03:0,83,1063	0/0:6,0:6:10.28:0,10,121
chr10	7180369	.	CTCTG	C	455.56	PASS	AB=0.950;AC=11;AF=0.196;AN=56;BaseQRankSum=7.081;DP=890;FS=21.380;HRun=0;HaplotypeScore=283.4737;InbreedingCoeff=0.1296;MQ=38.69;MQ0=22;MQRankSum=-5.657;QD=1.72;ReadPosRankSum=-4.264;VQSLOD=0.5986;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,6:34:13.41:0,13,238	0/1:21,0:21:29.53:30,0,709	0/0:13,0:4:8.17:0,8,61	0/0:38,0:9:4.89:0,5,49	0/0:37,2:38:30.10:0,30,728	1/1:24,8:29:6.91:71,7,0	0/1:9,3:11:38.86:54,0,39	0/0:53,0:42:84.67:0,85,2028	0/0:13,2:14:0.85:0,1,2	0/0:50,0:46:46.74:0,47,2417	0/0:25,1:25:16.85:0,17,484	0/1:23,0:20:24.19:24,0,88	0/1:39,0:38:37.17:37,0,424	0/0:24,0:23:20.75:0,21,331	0/0:39,0:35:56.29:0,56,1462	0/1:13,0:11:2.91:3,0,57	0/0:14,0:14:5.38:0,5,148	0/0:21,1:22:51.15:0,51,1143	0/1:23,0:19:62.56:63,0,327	0/1:52,11:57:43.87:237,0,44	0/0:28,0:25:32.90:0,33,952	0/0:52,0:48:21.28:0,21,471	0/0:53,0:48:9.38:0,9,365	0/0:18,0:17:9.62:0,10,118	1/1:35,3:36:7.14:83,7,0	0/0:55,0:53:64.15:0,64,2556	0/0:42,0:42:93.34:0,93,1942	0/0:6,0:6:12.04:0,12,284
chr10	7180381	.	G	GTC	682.31	PASS	AB=0.812;AC=12;AF=0.214;AN=56;BaseQRankSum=5.336;DP=849;FS=3.332;HRun=0;HaplotypeScore=276.5183;InbreedingCoeff=0.2132;MQ=42.50;MQ0=19;MQRankSum=-4.089;QD=3.28;ReadPosRankSum=-3.571;VQSLOD=2.0594;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:29:22.10:0,22,250	0/0:16,0:16:19.61:0,20,311	1/1:17,0:3:1.11:6,1,0	0/0:46,0:17:1.95:0,2,13	0/0:42,0:40:36.08:0,36,456	0/1:17,11:26:9.32:64,0,9	0/1:10,2:10:36.52:41,0,37	0/0:45,0:37:84.15:0,84,987	1/1:11,4:14:3.83:20,4,0	0/0:52,0:48:99:0,116,1441	0/0:29,0:28:18.53:0,19,242	0/0:21,0:18:19.99:0,20,140	0/0:39,0:38:41.52:0,42,456	0/0:21,0:20:21.06:0,21,267	0/0:37,0:33:56.64:0,57,758	0/1:6,6:11:12.25:194,0,12	0/1:13,0:13:7.93:8,0,30	0/0:21,0:21:40.48:0,40,492	0/1:21,3:21:99:181,0,164	0/1:37,20:51:11.33:249,0,11	0/0:25,0:22:32.56:0,33,376	0/0:54,0:51:32.28:0,32,397	0/0:47,0:42:26.56:0,27,310	0/0:16,0:15:7.10:0,7,80	1/1:19,10:28:3.99:61,4,0	0/0:51,0:49:99:0,124,1528	0/0:40,0:40:66.20:0,66,828	0/0:6,0:6:14.24:0,14,149
chr10	7180395	.	CTCTG	C	1665.18	PASS	AB=0.915;AC=13;AF=0.232;AN=56;BaseQRankSum=4.573;DP=932;FS=0.506;HRun=0;HaplotypeScore=310.7742;InbreedingCoeff=-0.2617;MQ=52.78;MQ0=27;MQRankSum=-6.437;QD=3.64;ReadPosRankSum=-0.311;VQSLOD=1.4636;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:30:16.22:0,16,455	0/1:11,2:13:66.65:67,0,406	0/1:43,0:9:18.82:30,0,19	0/1:69,0:36:16.78:17,0,72	0/0:37,8:43:36.59:0,37,959	0/1:24,0:22:4.33:4,0,33	0/1:11,1:10:1.72:51,0,2	0/1:63,0:51:48.38:48,0,1779	0/0:17,0:16:6.82:0,7,70	0/1:43,11:51:99:428,0,2195	0/0:32,5:35:17.06:0,17,439	0/0:20,0:17:22.56:0,23,277	0/1:36,2:35:48.07:48,0,670	0/0:23,0:21:17.73:0,18,430	0/0:46,0:41:50.79:0,51,1340	0/0:14,0:12:20.10:0,20,201	0/1:7,5:13:42.28:265,0,42	0/0:18,0:19:29.76:0,30,906	0/1:21,1:17:27.08:27,0,330	0/0:51,1:47:21.98:0,22,152	0/0:19,0:17:2.88:0,3,410	0/0:53,2:51:26.45:0,26,668	0/0:49,0:44:19.81:0,20,639	0/0:14,0:13:5.69:0,6,162	0/0:31,0:30:4.32:0,4,37	0/1:44,8:50:99:407,0,1857	0/1:32,7:39:99:280,0,1121	0/1:10,1:12:99:141,0,424
chr10	7180401	.	C	CTA	1570.70	PASS	AB=0.936;AC=16;AF=0.286;AN=56;BaseQRankSum=5.072;DP=951;FS=11.969;HRun=0;HaplotypeScore=296.8407;InbreedingCoeff=-0.2599;MQ=55.09;MQ0=28;MQRankSum=-5.757;QD=3.34;ReadPosRankSum=-0.056;VQSLOD=1.1437;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:32:19:0,19,266	0/1:14,1:15:59.28:59,0,205	0/1:54,0:12:12.80:13,0,44	0/0:82,0:42:31.05:0,31,202	0/0:45,2:45:36.12:0,36,549	0/1:21,2:21:16.26:16,0,32	1/1:15,2:13:5.89:52,6,0	0/1:65,4:53:99:300,0,1132	0/0:15,0:14:4.68:0,5,61	0/1:55,1:52:99:275,0,1295	0/0:33,2:33:18.71:0,19,257	0/1:17,1:15:25.29:25,0,121	0/0:31,3:31:15.02:0,15,390	0/0:17,4:19:14.74:0,15,229	0/0:44,5:43:51.56:0,52,760	0/1:14,0:12:13.81:14,0,111	0/1:11,2:13:55.36:245,0,55	0/1:19,0:19:0.83:1,0,537	0/1:18,0:13:10.95:11,0,291	0/1:50,0:46:6.05:6,0,69	0/0:17,0:14:17.65:0,18,239	0/0:54,0:50:26.40:0,26,402	0/0:48,0:43:26.90:0,27,376	0/0:12,0:11:5.96:0,6,92	0/0:33,0:32:0.69:0,1,29	0/1:47,2:47:99:361,0,1015	0/1:35,5:39:99:146,0,630	0/1:8,6:14:99:199,0,241
chr10	7180409	.	C	CTA	71.14	PASS	AB=0.908;AC=5;AF=0.089;AN=56;BaseQRankSum=4.894;DP=916;FS=32.359;HRun=0;HaplotypeScore=278.6745;InbreedingCoeff=0.1061;MQ=56.14;MQ0=30;MQRankSum=-1.988;QD=0.71;ReadPosRankSum=-0.676;VQSLOD=1.0296;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:25:14.57:0,15,209	0/0:14,0:13:11.28:0,11,207	0/0:60,0:12:18.60:0,19,123	0/0:93,0:43:37.33:0,37,281	0/0:44,0:42:33.09:0,33,505	0/0:19,0:17:5.74:0,6,33	0/0:15,0:11:3.01:0,3,44	0/0:67,0:49:99:0,132,1885	0/0:11,0:12:6.35:0,6,63	0/0:54,0:50:99:0,119,1749	0/0:31,0:29:15.01:0,15,210	0/1:14,3:15:8.84:9,0,127	0/1:30,3:30:99:142,0,396	0/0:16,2:19:15.05:0,15,225	0/0:49,0:44:50.85:0,51,691	0/0:14,0:12:17.75:0,18,204	0/0:13,0:13:33.16:0,33,266	0/0:18,0:18:10.85:0,11,537	0/1:18,0:14:9.15:9,0,303	0/0:43,0:45:7.21:0,7,121	0/0:16,0:12:15.05:0,15,230	0/0:42,4:44:20.78:0,21,271	0/0:38,7:44:21.02:0,21,318	0/0:8,2:9:5.96:0,6,92	1/1:28,0:29:1.93:8,2,0	0/0:44,0:42:86.50:0,86,1356	0/0:38,0:37:71.80:0,72,956	0/0:14,0:14:33.03:0,33,422
chr10	7180429	.	GTCTC	G	393.02	PASS	AB=0.888;AC=18;AF=0.321;AN=56;BaseQRankSum=5.697;DP=763;FS=63.455;HRun=0;HaplotypeScore=249.4223;InbreedingCoeff=-0.0559;MQ=50.35;MQ0=25;MQRankSum=-5.111;QD=1.09;ReadPosRankSum=1.230;VQSLOD=0.4621;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,1:19:4.97:0,5,70	0/0:11,0:10:20.58:0,21,254	0/0:33,0:6:2.49:0,2,9	0/0:67,0:29:1.24:0,1,112	0/0:39,1:39:17.71:0,18,246	0/0:9,2:10:0.91:0,1,2	0/1:16,0:12:0:0,0,0	0/1:60,3:40:99:181,0,712	0/1:6,2:9:3.09:3,0,3	0/0:53,0:48:63.87:0,64,1555	0/0:32,1:29:7.54:0,8,108	0/1:13,2:13:5.33:5,0,77	0/1:24,2:23:18:18,0,160	0/1:11,4:13:0.23:0,0,0	0/0:37,6:37:17.30:0,17,287	0/1:11,2:12:2.16:35,0,2	0/1:10,0:11:21.79:25,0,22	0/1:13,0:12:24.34:24,0,130	0/1:15,2:13:21.06:21,0,117	1/1:35,2:39:5.02:75,5,0	0/0:11,0:10:6.02:0,6,102	0/0:33,3:36:2.70:0,3,24	0/0:35,0:35:8.20:0,8,101	0/1:8,1:9:0:0,0,0	1/1:11,3:16:2.80:9,3,0	0/1:42,2:42:46.63:47,0,1576	0/1:31,3:34:36.34:36,0,837	0/1:12,2:14:49.22:49,0,361
chr10	7180431	.	C	CTCTG	872.04	PASS	AB=0.973;AC=20;AF=0.357;AN=56;BaseQRankSum=4.985;DP=751;FS=46.207;HRun=0;HaplotypeScore=245.2626;InbreedingCoeff=-0.0538;MQ=48.78;MQ0=26;MQRankSum=-6.260;QD=2.13;ReadPosRankSum=-0.979;VQSLOD=0.7086;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:19:5.28:0,5,68	0/0:10,0:9:19.61:0,20,279	0/0:33,0:5:2.49:0,2,9	0/0:66,0:26:0.11:0,0,116	0/0:38,0:37:20.38:0,20,264	0/0:11,0:10:0.91:0,1,2	0/1:16,0:12:0:1,0,0	0/1:58,2:38:99:302,0,638	0/1:9,0:9:2.24:2,0,15	0/1:50,1:47:0.52:1,0,1549	0/0:33,0:29:7.48:0,7,116	0/1:15,0:13:47.20:47,0,69	0/1:28,0:26:20.91:21,0,187	0/1:16,0:14:0.06:1,0,0	0/0:43,0:37:16.65:0,17,240	1/1:12,0:10:7.59:75,8,0	1/1:11,0:11:0.14:62,0,0	0/1:11,2:12:99:170,0,167	0/1:17,0:13:1.87:2,0,159	0/1:39,0:37:9.91:70,0,10	0/0:12,1:9:6.02:0,6,102	0/0:37,0:35:3.14:0,3,24	0/0:35,0:33:8.52:0,9,102	0/1:8,0:8:0:0,0,0	1/1:16,0:16:4.41:20,4,0	0/1:44,0:42:99:130,0,1252	0/1:35,0:35:58.97:59,0,677	0/1:14,0:14:44.87:45,0,337
chr10	7180439	.	GTC	G	726.11	PASS	AB=0.965;AC=23;AF=0.411;AN=56;BaseQRankSum=0.788;DP=682;FS=1.372;HRun=0;HaplotypeScore=227.3737;InbreedingCoeff=-0.1117;MQ=44.73;MQ0=23;MQRankSum=-0.724;QD=1.35;ReadPosRankSum=0.430;VQSLOD=2.7240;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,1:18:1.63:0,2,4	0/0:10,0:10:18.51:0,19,222	0/0:25,1:4:0.89:0,1,2	0/1:65,1:24:5.71:6,0,70	1/1:33,1:33:7.26:84,7,0	0/0:8,0:7:1.18:0,1,2	0/1:13,1:10:0:0,0,0	0/1:39,1:19:23.52:24,0,308	1/1:8,2:10:5.19:22,5,0	0/1:45,2:44:99:209,0,691	0/1:33,1:31:24.11:63,0,24	0/0:16,1:14:7.21:0,7,41	0/1:26,2:25:49.23:49,0,117	0/0:17,0:14:2.80:0,3,7	0/0:35,0:29:8.49:0,8,158	0/0:11,1:10:11.08:0,11,73	1/1:10,0:10:1.66:9,2,0	0/1:12,0:11:52.44:52,0,93	0/1:14,0:11:39.38:83,0,39	0/1:30,2:31:12.74:32,0,13	0/1:10,0:7:0:0,0,0	0/1:30,3:31:0.08:0,0,0	0/1:30,5:33:0.13:0,0,0	0/1:11,0:9:0.08:0,0,1	0/1:17,0:17:0.42:0,0,10	0/1:41,1:39:99:149,0,1095	0/1:32,2:34:28.52:29,0,700	0/1:14,0:14:46.26:46,0,215
chr10	7180443	.	CTCT	C	401.45	PASS	AB=0.836;AC=20;AF=0.357;AN=56;BaseQRankSum=-0.644;DP=652;FS=16.625;HRun=0;HaplotypeScore=223.6005;InbreedingCoeff=-0.1374;MQ=45.15;MQ0=25;MQRankSum=-2.213;QD=1.10;ReadPosRankSum=-0.866;VQSLOD=1.3611;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:17,1:17:2.37:0,2,22	0/0:8,0:8:18.04:0,18,261	0/0:30,0:5:7.96:0,8,50	0/0:67,0:22:22.88:0,23,293	0/1:30,3:32:59.37:59,0,107	0/0:6,1:5:1.60:0,2,4	0/0:9,4:9:0.40:0,0,1	0/0:35,0:15:28.88:0,29,613	1/1:7,3:10:1.46:17,1,0	0/1:36,7:40:99:138,0,982	0/1:24,8:29:13.39:13,0,24	0/1:12,2:11:7.19:7,0,105	0/1:20,6:24:9.57:10,0,289	0/0:12,3:12:3.60:0,4,17	0/0:32,3:30:8.52:0,9,216	0/0:8,5:11:11.20:0,11,99	0/0:10,0:10:11.75:0,12,117	0/1:11,1:11:19.06:19,0,262	0/1:8,3:9:75.49:75,0,122	0/1:23,8:30:19.40:19,0,51	0/1:9,2:8:18.98:19,0,32	1/1:22,8:28:0.32:1,0,0	1/1:24,9:31:2.46:25,2,0	1/1:11,0:9:0.05:1,0,0	0/1:9,5:14:0.37:0,0,49	0/1:33,4:36:69.07:69,0,1679	0/0:34,2:36:15.51:0,16,1097	0/1:10,4:14:67.75:68,0,329
chr10	7180449	.	CTCTCTCTG	C	1979.94	PASS	AB=0.993;AC=28;AF=0.519;AN=54;BaseQRankSum=-3.176;DP=660;FS=3.119;HRun=0;HaplotypeScore=248.1081;InbreedingCoeff=0.1898;MQ=43.92;MQ0=24;MQRankSum=0.072;QD=4.02;ReadPosRankSum=-1.251;VQSLOD=2.0800;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:19:0.58:0,1,2	1/1:4,5:9:12.04:257,12,0	0/0:39,0:9:17.50:0,18,211	0/1:65,0:22:9.96:10,0,116	1/1:21,9:29:12.40:195,12,0	./.	0/1:13,0:9:0:0,0,0	1/1:36,0:18:24.97:353,25,0	0/0:10,0:10:2.68:0,3,32	0/1:37,3:37:74.84:829,0,75	1/1:29,5:32:9.71:174,10,0	0/0:13,0:10:6.48:0,6,20	0/1:26,0:24:28.31:33,0,28	1/1:15,0:12:2.73:29,3,0	1/1:19,15:30:11.65:96,12,0	0/1:14,0:12:33.42:41,0,33	1/1:9,0:9:1.20:38,1,0	0/0:14,1:14:31.22:0,31,278	0/0:11,0:10:4.66:0,5,88	0/1:34,0:33:9.14:9,0,13	1/1:10,0:7:3.01:41,3,0	0/1:28,0:26:0.12:0,0,0	1/1:30,0:28:0.17:1,0,0	0/0:11,0:9:0:0,0,1	0/1:15,0:15:0.12:0,0,0	0/0:41,0:38:5.51:0,6,1746	0/1:33,0:33:17.42:17,0,1077	0/1:16,0:16:3.44:3,0,535
chr10	7180451	.	C	CTG	452.52	PASS	AB=0.962;AC=12;AF=0.214;AN=56;BaseQRankSum=3.270;DP=665;FS=9.108;HRun=0;HaplotypeScore=239.9058;InbreedingCoeff=0.1122;MQ=47.10;MQ0=23;MQRankSum=-2.335;QD=1.63;ReadPosRankSum=0.775;VQSLOD=0.5411;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:17,3:19:2.48:0,2,13	0/0:8,0:8:15.03:0,15,173	0/0:39,0:12:13.89:0,14,133	0/0:68,0:22:21.17:0,21,189	0/0:31,0:30:11.61:0,12,151	0/0:7,0:4:2.49:0,2,5	0/0:13,0:9:0:0,0,0	0/0:37,0:19:33.79:0,34,467	1/1:9,1:10:5.56:51,6,0	0/1:38,0:35:65.03:65,0,593	0/1:34,0:32:0.68:1,0,24	0/0:11,2:10:4.33:0,4,24	0/1:24,2:24:3.73:132,0,4	0/1:16,1:14:0.31:0,0,6	0/0:34,0:30:11.23:0,11,150	0/0:15,0:13:8.68:0,9,56	0/0:10,0:10:11.16:0,11,66	0/0:16,0:15:13.89:0,14,239	0/1:10,0:10:36.68:94,0,37	0/1:33,0:32:12.13:58,0,12	0/0:10,0:7:3.01:0,3,42	0/1:27,1:26:0.06:1,0,0	0/1:29,0:27:0.06:0,0,0	0/1:8,3:9:0.19:0,0,0	0/0:15,0:15:2.25:0,2,14	0/1:42,0:39:99:169,0,854	0/0:32,0:32:2.36:0,2,591	0/0:16,0:16:3.17:0,3,181
chr10	7180457	.	GTC	G	220.82	PASS	AB=0.942;AC=19;AF=0.339;AN=56;BaseQRankSum=3.482;DP=634;FS=22.733;HRun=0;HaplotypeScore=230.5102;InbreedingCoeff=0.0255;MQ=49.77;MQ0=21;MQRankSum=-3.028;QD=0.66;ReadPosRankSum=2.887;VQSLOD=1.2667;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:17,1:17:0.94:0,1,2	0/1:9,0:9:0.42:0,0,60	0/0:44,0:15:25.12:0,25,281	0/0:73,0:26:31.60:0,32,312	0/0:26,0:25:3.23:0,3,104	0/1:6,2:5:0:0,0,0	0/1:11,0:8:0:0,0,0	0/1:31,1:16:2.20:2,0,246	1/1:8,0:8:5.20:23,5,0	0/1:36,1:34:67.51:68,0,174	1/1:31,1:29:2.22:9,2,0	0/0:13,0:10:3.31:0,3,38	1/1:22,1:21:9.01:37,9,0	0/0:15,1:13:2.51:0,3,7	0/0:26,8:29:8.38:0,8,105	0/0:15,0:13:8.15:0,8,74	0/0:9,0:9:1.97:0,2,34	0/1:13,3:15:75.76:76,0,184	0/1:9,0:9:18.13:18,0,21	0/1:27,0:27:20.37:20,0,30	0/0:11,0:8:3.01:0,3,36	0/0:26,1:26:0.12:0,0,0	0/1:25,0:25:0.04:0,0,0	0/0:11,0:9:0:0,0,1	0/1:16,0:16:0.14:0,0,11	0/1:33,4:34:55.31:55,0,986	0/1:28,4:32:36.17:36,0,660	0/1:12,2:14:2.46:2,0,299
chr10	7180459	.	C	CTA	399.49	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=1.997;DP=642;FS=6.369;HRun=0;HaplotypeScore=236.9341;InbreedingCoeff=0.0122;MQ=53.54;MQ0=21;MQRankSum=-1.282;QD=1.02;ReadPosRankSum=-0.893;VQSLOD=1.5196;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:17:2.85:0,3,16	0/0:9,0:9:3.98:0,4,111	0/0:46,0:18:30.54:0,31,301	0/0:78,0:29:19.88:0,20,298	0/1:27,0:26:10.43:10,0,49	1/1:9,0:5:2.50:9,2,0	0/0:11,0:8:0.47:0,0,1	0/1:33,0:18:66.71:67,0,86	1/1:7,0:7:2.95:24,3,0	0/1:36,0:33:88.88:89,0,303	0/1:32,0:29:5.20:36,0,5	0/0:12,1:10:7.76:0,8,69	0/1:23,0:21:3.04:115,0,3	1/1:15,2:14:6.99:59,7,0	0/1:34,0:29:6.48:6,0,94	0/1:15,0:13:6.81:7,0,68	0/1:11,0:11:1.96:2,0,43	0/0:16,0:15:34.64:0,35,389	0/1:8,0:8:42.81:43,0,58	0/1:26,0:26:18.14:37,0,18	0/0:11,0:8:2.94:0,3,18	1/1:24,4:27:0.10:1,0,0	0/1:24,0:24:0.10:0,0,1	0/1:11,0:9:0.06:0,0,0	1/1:16,0:16:1.94:22,2,0	0/1:36,0:33:15.32:15,0,900	0/0:33,0:33:15.35:0,15,623	0/0:14,0:14:27.81:0,28,346
chr10	7180467	.	C	CTA	282.55	PASS	AB=0.864;AC=13;AF=0.250;AN=52;BaseQRankSum=5.350;DP=611;FS=13.611;HRun=0;HaplotypeScore=227.7107;InbreedingCoeff=0.2017;MQ=58.36;MQ0=18;MQRankSum=-2.043;QD=1.71;ReadPosRankSum=-2.606;VQSLOD=1.0512;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:13,1:13:2.96:0,3,33	0/0:8,0:8:12:0,12,121	0/0:55,0:24:51.08:0,51,626	0/0:88,0:33:5.22:0,5,436	0/0:25,0:24:12.48:0,12,158	./.	./.	0/0:30,0:20:57:0,57,703	0/0:6,1:7:2.52:0,3,17	0/0:33,0:31:86.50:0,87,873	0/0:29,0:27:12.81:0,13,120	0/1:10,0:10:11.04:11,0,37	0/1:20,0:18:36.27:36,0,38	1/1:15,1:13:7.27:46,7,0	0/0:32,0:28:3.75:0,4,20	1/1:8,5:11:8.24:81,8,0	0/1:4,4:8:23.79:110,0,24	0/0:16,0:15:35.28:0,35,292	0/1:6,2:8:62.56:63,0,66	0/1:20,6:26:19.01:65,0,19	0/0:9,0:7:3.01:0,3,46	0/1:20,1:20:0.18:0,0,0	0/1:15,4:19:0.05:0,0,0	0/1:9,0:8:0.01:0,0,0	0/1:9,6:15:0.37:0,0,1	0/0:33,0:31:68.15:0,68,1033	0/0:36,0:36:54.28:0,54,676	0/0:14,0:14:24.08:0,24,338
chr10	7180468	.	TCTCTG	T	492.17	PASS	AB=0.975;AC=23;AF=0.411;AN=56;BaseQRankSum=5.196;DP=611;FS=10.262;HRun=0;HaplotypeScore=234.4459;InbreedingCoeff=-0.0793;MQ=59.33;MQ0=18;MQRankSum=-4.909;QD=1.49;ReadPosRankSum=1.948;VQSLOD=1.5475;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:12,2:13:1.36:3,1,0	0/1:9,0:9:33.50:33,0,74	0/0:57,0:26:59.38:0,59,970	0/0:91,0:35:60.73:0,61,919	0/1:25,0:24:13.44:13,0,31	0/1:8,0:4:0:0,0,0	0/0:8,0:5:0:0,0,0	0/0:30,0:20:14.18:0,14,410	0/1:6,1:7:0.35:0,0,1	0/1:33,0:31:99:113,0,409	0/1:30,0:28:10.25:10,0,94	0/1:9,0:9:23.71:32,0,24	1/1:19,0:18:6.91:124,7,0	1/1:16,0:13:4.49:56,4,0	0/0:33,0:29:2.81:0,3,17	0/1:11,2:11:13.40:43,0,13	0/1:8,0:8:4.51:48,0,5	0/0:16,0:15:12.35:0,12,58	0/1:7,0:7:12.37:32,0,12	1/1:23,2:25:0.45:46,0,0	0/0:9,0:7:2.68:0,3,11	0/0:20,0:19:1.23:0,1,3	0/1:18,0:18:0.37:0,0,1	0/1:7,0:7:0.08:0,0,1	0/0:14,1:15:1.74:0,2,5	0/1:32,0:31:15.92:16,0,1835	0/1:36,0:36:30.44:30,0,1204	0/1:14,0:14:26.33:26,0,549
chr10	7180469	.	CTCT	C	884.22	PASS	AB=0.929;AC=20;AF=0.357;AN=56;BaseQRankSum=7.373;DP=606;FS=18.917;HRun=0;HaplotypeScore=224.4024;InbreedingCoeff=0.0071;MQ=59.69;MQ0=18;MQRankSum=-4.643;QD=3.06;ReadPosRankSum=1.485;VQSLOD=1.0030;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:9,5:13:2.44:0,2,16	0/1:9,0:9:2.83:3,0,81	0/0:57,0:26:59.85:0,60,1017	0/0:93,0:36:63.87:0,64,960	0/1:25,0:24:0.90:1,0,108	0/1:8,0:4:0:0,0,0	0/0:2,2:3:0:0,0,0	0/0:33,0:23:56.31:0,56,989	1/1:7,0:7:4.21:23,4,0	0/1:33,1:32:99:148,0,718	0/0:29,0:27:2.15:0,2,163	0/0:9,0:9:7.68:0,8,49	1/1:19,0:18:11.48:72,11,0	1/1:15,1:13:0.21:14,0,0	0/0:33,0:29:2.36:0,2,42	0/1:13,0:11:10.20:10,0,22	0/1:6,2:8:0.41:0,0,26	0/1:7,8:14:7.46:409,0,7	0/1:6,1:7:7.58:102,0,8	0/1:23,1:24:2.46:59,0,2	0/0:5,4:7:2.94:0,3,38	0/0:19,0:18:1.05:0,1,3	0/0:17,0:17:0.04:0,0,1	0/1:6,2:7:0.04:0,0,0	0/1:15,0:15:0.17:1,0,0	0/1:31,0:30:40.98:41,0,1418	0/1:34,2:36:99:106,0,1002	0/1:14,0:14:24.88:25,0,419
chr10	7180470	.	TCTG	T	1398.07	PASS	AB=0.936;AC=25;AF=0.446;AN=56;BaseQRankSum=7.999;DP=589;FS=26.791;HRun=0;HaplotypeScore=212.4075;InbreedingCoeff=0.2387;MQ=60.38;MQ0=17;MQRankSum=-5.802;QD=5.34;ReadPosRankSum=1.987;VQSLOD=1.1472;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:14,0:13:0.28:1,0,0	0/0:9,0:9:2.18:0,2,104	0/0:57,1:26:60.40:0,60,1023	0/0:94,0:36:67.42:0,67,962	0/0:22,2:24:1.74:0,2,119	0/1:8,0:4:0:0,0,0	0/0:3,1:3:0:0,0,0	0/0:32,0:23:35.58:0,36,1020	1/1:4,1:5:5.38:46,5,0	0/1:29,5:32:99:264,0,713	0/0:24,5:27:8.06:0,8,219	1/1:6,1:7:1.54:5,2,0	1/1:13,6:18:14.60:152,15,0	1/1:14,2:13:0.33:41,0,0	0/0:30,3:29:2.45:0,2,46	1/1:9,2:9:3.34:42,3,0	1/1:7,0:7:6.97:46,7,0	0/1:15,1:15:28.46:319,0,28	1/1:5,1:6:14.88:175,15,0	1/1:17,3:20:12.20:112,12,0	0/0:7,2:7:3.48:0,3,42	0/0:12,6:17:1.31:0,1,3	0/0:11,5:16:0.04:0,0,1	0/1:8,0:7:0.08:0,0,1	0/1:11,2:13:0.16:0,0,0	0/1:28,3:30:99:160,0,1399	0/1:34,1:35:99:118,0,962	0/1:10,2:12:63.05:63,0,419
chr10	7180473	.	GGTC	G	139.19	PASS	AB=0.990;AC=16;AF=0.286;AN=56;BaseQRankSum=7.270;DP=577;FS=16.706;HRun=0;HaplotypeScore=217.8792;InbreedingCoeff=0.1648;MQ=61.03;MQ0=18;MQRankSum=-5.748;QD=0.93;ReadPosRankSum=-2.015;VQSLOD=1.3341;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:13,0:12:2.86:3,0,7	0/0:10,0:10:19.30:0,19,274	0/0:59,0:26:60.27:0,60,992	0/0:97,1:36:68.27:0,68,1048	0/0:24,0:24:9.62:0,10,203	0/1:7,0:4:0:0,0,0	0/0:4,0:3:0:0,0,0	0/0:28,0:24:70.79:0,71,1670	1/1:6,0:6:2.91:7,3,0	0/0:34,0:33:1.68:0,2,1141	0/0:28,0:26:16.19:0,16,393	0/1:8,0:9:7.34:19,0,7	1/1:20,0:19:1.34:105,1,0	1/1:13,1:12:0.49:63,0,0	0/0:31,0:27:8.14:0,8,144	0/1:9,0:8:11.93:12,0,21	0/0:7,0:7:7.25:0,7,47	0/1:15,0:14:15.38:15,0,81	0/1:7,0:6:2.07:2,0,2	0/1:17,0:17:18.53:26,0,19	0/0:9,0:7:3.01:0,3,73	0/0:14,1:14:3.35:0,3,9	0/0:11,4:15:0.04:0,0,1	0/1:8,0:7:0.08:0,0,1	0/1:11,0:11:0.16:0,0,0	0/0:32,0:31:6.63:0,7,1396	0/0:33,0:33:19.44:0,19,957	0/1:13,0:13:10.13:10,0,413
chr10	7180482	.	G	GTCTC	687.28	PASS	AB=0.908;AC=10;AF=0.185;AN=54;BaseQRankSum=5.784;DP=586;FS=9.330;HRun=0;HaplotypeScore=239.6808;InbreedingCoeff=-0.0412;MQ=62.55;MQ0=10;MQRankSum=-1.936;QD=2.51;ReadPosRankSum=-3.264;VQSLOD=0.7835;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:9,5:13:60.42:64,0,60	0/0:12,0:12:21.31:0,21,356	0/1:51,0:26:5.73:6,0,541	0/1:93,0:39:2.99:3,0,611	0/0:28,0:27:7.86:0,8,148	./.	0/0:2,1:3:2.75:0,3,20	0/0:29,0:25:74.90:0,75,1313	0/0:6,0:6:1.13:0,1,27	0/0:36,1:36:81.06:0,81,1461	0/0:30,0:28:16.72:0,17,341	0/1:10,0:10:0.28:0,0,49	0/1:17,2:18:46.01:97,0,46	1/1:15,0:13:11.91:110,12,0	0/0:31,0:27:4.61:0,5,155	0/0:8,0:7:8.74:0,9,68	0/0:7,0:7:11.51:0,12,137	0/1:8,8:15:99:470,0,144	0/0:7,0:5:12.01:0,12,151	0/1:18,0:17:13.80:14,0,40	0/0:4,4:7:3.01:0,3,57	0/0:17,0:16:1.30:0,1,5	0/0:19,0:19:3.92:0,4,11	0/0:5,3:7:2.77:0,3,13	0/0:12,0:12:2.82:0,3,8	0/0:31,0:30:65.66:0,66,1136	0/1:33,1:34:51.02:51,0,751	0/0:12,0:12:15.93:0,16,219
chr10	7180484	.	CTGTCTATCTCTG	C	350.39	PASS	AB=0.990;AC=7;AF=0.130;AN=54;BaseQRankSum=6.855;DP=582;FS=0.000;HRun=0;HaplotypeScore=271.4337;InbreedingCoeff=0.0183;MQ=62.74;MQ0=11;MQRankSum=-3.251;QD=3.89;ReadPosRankSum=-3.186;VQSLOD=1.8123;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:14,0:13:45.47:45,0,57	0/0:12,0:12:24.70:0,25,409	0/0:51,0:26:18.65:0,19,793	0/0:89,0:37:12.95:0,13,1117	0/0:27,0:27:14.38:0,14,244	./.	0/0:4,0:4:5.80:0,6,44	0/0:29,0:25:75.12:0,75,1771	0/0:6,0:6:3.31:0,3,15	0/0:36,0:36:10.55:0,11,1915	0/0:29,0:27:15.17:0,15,563	0/0:10,0:10:2.07:0,2,64	0/1:18,0:18:66.14:175,0,66	1/1:14,1:13:9.68:160,10,0	0/0:31,0:27:12.21:0,12,196	0/0:8,0:7:4.12:0,4,32	0/1:7,0:7:8.88:9,0,76	0/1:16,0:15:74.09:74,0,171	0/0:7,0:5:2.02:0,2,53	0/1:19,0:18:9.83:10,0,67	0/0:8,0:7:3.01:0,3,98	0/0:16,1:17:3.13:0,3,11	0/0:14,4:18:4.55:0,5,12	0/0:8,0:7:3.15:0,3,12	0/0:13,0:13:4.19:0,4,16	0/0:30,0:29:76.04:0,76,1636	0/0:33,0:33:12.61:0,13,1155	0/0:12,0:12:15.94:0,16,337
chr10	7180488	.	CTA	C	52.81	PASS	AB=0.939;AC=12;AF=0.222;AN=54;BaseQRankSum=6.133;DP=562;FS=0.748;HRun=0;HaplotypeScore=233.2136;InbreedingCoeff=-0.0234;MQ=58.90;MQ0=11;MQRankSum=-3.882;QD=0.31;ReadPosRankSum=-3.898;VQSLOD=1.9519;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:15,0:14:8.19:8,0,94	0/0:12,0:12:22.94:0,23,349	0/0:47,0:23:51.71:0,52,726	0/0:79,2:32:47.20:0,47,657	0/0:27,0:26:6.70:0,7,122	./.	0/0:4,0:4:5.42:0,5,23	0/0:28,0:25:75.13:0,75,1269	0/0:7,0:7:6.52:0,7,52	0/0:37,0:36:59.15:0,59,1443	0/0:28,1:27:17.51:0,18,347	0/1:8,1:9:1.37:1,0,27	0/1:15,0:15:43.04:43,0,52	0/1:12,4:14:0.40:58,0,0	0/0:32,0:28:11.77:0,12,166	0/0:9,0:8:7.01:0,7,77	0/1:7,0:7:18.86:19,0,144	0/0:15,0:14:4.84:0,5,201	0/0:7,0:5:7.59:0,8,115	0/1:19,0:18:5.41:5,0,64	0/0:7,0:6:3.01:0,3,58	0/1:10,5:14:2.11:4,0,2	1/1:15,3:18:1.02:5,1,0	0/0:7,1:7:2.74:0,3,12	0/1:13,0:13:0.57:1,0,8	0/1:33,0:31:18.03:18,0,1107	0/0:30,0:30:33.32:0,33,845	0/1:11,0:11:12.56:13,0,198
chr10	7180496	.	G	GTCTCTGTC	9027.88	PASS	AB=0.833;AC=41;AF=0.788;AN=52;BaseQRankSum=-3.498;DP=547;FS=4.825;HRun=0;HaplotypeScore=233.5569;InbreedingCoeff=0.5401;MQ=54.21;MQ0=10;MQRankSum=-1.970;QD=24.27;ReadPosRankSum=3.945;VQSLOD=4.1935;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:14:6.93:144,7,0	1/1:6,7:14:12.04:382,12,0	0/0:34,0:16:16.05:0,16,154	0/0:74,0:27:32.08:0,32,372	0/0:11,14:27:0.38:0,0,1	./.	1/1:3,0:3:6.02:180,6,0	1/1:24,0:19:27.05:406,27,0	1/1:4,0:5:2.68:114,3,0	1/1:14,26:41:85.82:2457,86,0	1/1:21,6:27:5.26:88,5,0	0/0:9,0:10:0.61:0,1,2	1/1:16,0:16:12.87:310,13,0	1/1:17,0:16:10.24:266,10,0	1/1:22,5:26:8.98:267,9,0	1/1:8,0:10:2.57:104,3,0	1/1:5,0:6:13.01:357,13,0	1/1:12,2:14:17.16:387,17,0	1/1:7,0:5:9.03:336,9,0	1/1:16,0:17:1.88:86,2,0	./.	1/1:15,0:19:0.15:1,0,0	1/1:15,0:18:0.27:1,0,0	0/1:8,0:9:0:1,0,0	0/0:13,0:13:0.95:0,1,2	1/1:20,5:28:54.17:1440,54,0	1/1:21,10:31:43.41:1285,43,0	1/1:5,2:8:12.04:415,12,0
chr10	7180500	.	CTG	C	527.15	PASS	AB=0.935;AC=22;AF=0.393;AN=56;BaseQRankSum=3.763;DP=535;FS=7.558;HRun=0;HaplotypeScore=231.4105;InbreedingCoeff=-0.3039;MQ=52.51;MQ0=12;MQRankSum=-2.174;QD=1.44;ReadPosRankSum=2.885;VQSLOD=1.0359;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:16,1:17:13.20:13,0,43	0/1:14,0:14:12.16:48,0,12	0/0:28,0:11:3.43:0,3,176	0/0:70,0:25:31.15:0,31,490	0/0:28,0:27:3.57:0,4,30	0/1:7,2:6:0:0,0,0	0/1:4,0:4:11.18:23,0,11	0/1:22,0:17:2.72:3,0,181	0/0:5,0:5:6.59:0,7,49	0/1:47,0:44:72.30:72,0,720	0/1:30,0:27:1.17:1,0,79	0/1:6,4:10:37.24:37,0,40	0/1:12,5:17:43.55:44,0,51	0/1:12,5:16:3.59:4,0,18	0/1:30,0:26:17.86:33,0,18	0/1:10,0:10:9.50:9,0,15	0/1:5,1:6:6.80:45,0,7	0/1:14,0:13:76.06:112,0,76	0/0:7,0:5:9.03:0,9,121	1/1:17,1:17:5.14:29,5,0	0/0:8,0:8:3.44:0,3,21	0/1:19,1:19:2.30:4,0,2	1/1:16,2:18:3.24:12,3,0	0/0:9,1:9:2.55:0,3,13	0/0:12,0:12:2.33:0,2,54	0/1:27,0:25:29.56:30,0,274	0/1:30,0:30:99:142,0,156	0/1:7,0:7:6.06:6,0,61
chr10	7180502	.	GTC	G	1819.14	PASS	AB=0.881;AC=23;AF=0.411;AN=56;BaseQRankSum=0.353;DP=534;FS=18.807;HRun=0;HaplotypeScore=228.4572;InbreedingCoeff=-0.2849;MQ=52.44;MQ0=13;MQRankSum=-0.345;QD=5.08;ReadPosRankSum=1.817;VQSLOD=1.3297;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:10,6:16:22.08:45,0,22	0/1:14,0:14:13.18:122,0,13	0/0:26,0:9:15.83:0,16,129	0/0:70,0:24:32.95:0,33,427	0/0:24,3:26:0.58:0,1,6	0/1:8,0:5:0:0,0,0	0/1:3,1:4:26.56:59,0,27	0/1:18,2:15:67.65:171,0,68	0/0:6,0:6:6.50:0,7,31	0/1:46,2:45:99:274,0,638	1/1:25,5:27:4.18:42,4,0	0/1:9,1:10:24.25:38,0,24	0/1:18,0:18:70.89:71,0,72	0/0:16,0:15:0.94:0,1,30	0/1:24,5:25:33.64:86,0,34	0/1:9,2:11:28.08:43,0,28	0/1:6,0:6:9.44:66,0,9	0/1:5,9:13:58.26:245,0,58	0/0:6,1:5:8.95:0,9,67	1/1:16,2:17:5.27:48,5,0	0/1:6,3:9:0:0,0,0	0/1:20,0:19:2.30:4,0,2	1/1:18,0:18:3.24:12,3,0	0/0:7,3:9:2.55:0,3,12	0/0:10,2:12:2.33:0,2,44	0/1:24,4:26:99:231,0,291	0/1:25,5:30:99:384,0,121	0/1:6,1:7:22.79:23,0,55
chr10	7180506	.	C	CTCTGTCTA	7352.75	PASS	AB=0.981;AC=36;AF=0.667;AN=54;BaseQRankSum=-3.170;DP=532;FS=0.680;HRun=0;HaplotypeScore=238.0826;InbreedingCoeff=0.1020;MQ=48.69;MQ0=16;MQRankSum=-1.804;QD=19.20;ReadPosRankSum=5.826;VQSLOD=3.8726;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,2:13:8.58:171,9,0	0/1:12,0:12:3.95:294,0,4	0/0:30,0:9:17.86:0,18,195	0/0:76,0:22:25.19:0,25,554	0/0:26,0:25:0.30:0,0,1	./.	1/1:4,2:6:8.96:231,9,0	0/1:18,0:13:20.13:219,0,20	1/1:2,3:5:5.62:150,6,0	0/1:45,0:42:44.46:1767,0,44	0/1:33,0:30:18.03:30,0,18	0/1:11,0:11:0.39:34,0,0	1/1:16,2:18:5.09:391,5,0	1/1:12,2:13:11.94:335,12,0	0/1:27,0:24:5.38:203,0,5	1/1:9,3:12:5.51:141,6,0	1/1:3,3:6:10:368,10,0	0/1:14,0:13:31.68:237,0,32	1/1:4,3:5:9.03:397,9,0	1/1:11,5:15:1.93:105,2,0	0/0:10,0:10:0.47:0,0,1	0/1:19,2:20:0.08:1,0,0	1/1:15,4:19:0.27:1,0,0	0/1:8,1:8:0:1,0,0	1/1:8,6:14:1.62:19,2,0	0/1:26,0:24:25.01:1009,0,25	1/1:30,0:30:34.85:908,35,0	1/1:7,0:7:12.04:342,12,0
chr10	7180528	.	CTG	C	977.35	PASS	AB=1.000;AC=23;AF=0.426;AN=54;BaseQRankSum=0.767;DP=611;FS=1.190;HRun=0;HaplotypeScore=257.7845;InbreedingCoeff=0.3565;MQ=44.79;MQ0=34;MQRankSum=-0.311;QD=3.17;ReadPosRankSum=-6.073;VQSLOD=1.2023;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:12,0:12:6.75:87,7,0	0/0:15,0:15:4.54:0,5,189	0/0:84,0:19:17.47:0,17,529	0/1:117,0:25:13.41:13,0,239	0/0:26,0:25:1.38:0,1,13	1/1:7,0:6:17.65:108,18,0	0/1:8,0:8:24.31:28,0,24	0/0:13,0:9:27.09:0,27,516	0/1:8,0:8:28.55:29,0,34	0/0:33,0:31:72.23:0,72,1353	0/0:31,0:30:29.25:0,29,491	0/1:14,0:14:8.14:71,0,8	0/0:12,0:12:11.71:0,12,77	0/1:19,0:18:22.04:60,0,22	0/0:25,0:25:26.53:0,27,322	1/1:15,0:15:2.46:123,2,0	0/1:10,0:10:24.64:48,0,25	0/0:12,0:12:7.77:0,8,250	0/1:7,0:6:5.75:6,0,38	1/1:16,1:16:19.26:142,19,0	./.	1/1:27,1:27:27.01:225,27,0	1/1:23,2:25:14.62:122,15,0	1/1:5,0:5:4.79:23,5,0	1/1:14,0:14:12.81:78,13,0	0/0:21,0:19:48.59:0,49,697	0/0:22,0:22:17.64:0,18,460	0/0:4,0:4:9.92:0,10,153
chr10	7180545	.	TGA	T	429.32	PASS	AB=0.890;AC=11;AF=0.196;AN=56;BaseQRankSum=2.483;DP=692;FS=47.235;HRun=0;HaplotypeScore=258.3380;InbreedingCoeff=-0.0022;MQ=45.26;MQ0=47;MQRankSum=-1.599;QD=2.50;ReadPosRankSum=-4.197;VQSLOD=0.9073;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:30.55:0,31,502	0/1:12,4:16:99:120,0,102	0/0:122,0:22:41.46:0,41,706	0/0:141,0:29:41.72:0,42,514	1/1:22,7:28:2.05:6,2,0	0/0:9,1:8:16.72:0,17,107	0/1:10,1:11:24.93:25,0,127	0/0:16,0:15:28.19:0,28,510	0/0:16,0:15:10.84:0,11,246	0/1:28,6:32:99:105,0,819	0/0:26,3:28:32.64:0,33,332	0/0:16,0:16:19.64:0,20,531	0/0:14,0:14:26.93:0,27,526	0/0:16,0:16:21.36:0,21,422	0/0:19,2:21:24.52:0,25,237	0/0:12,1:12:25.80:0,26,225	0/1:12,1:13:2.19:2,0,167	0/1:5,4:9:99:153,0,132	0/0:8,1:7:9.51:0,10,203	0/1:22,1:23:39.20:39,0,106	0/1:8,0:8:0:0,0,0	0/0:30,0:29:13.88:0,14,362	0/0:25,0:25:14.43:0,14,342	0/0:4,1:5:8.70:0,9,152	0/1:15,1:16:69.42:69,0,161	0/0:19,0:17:20.21:0,20,151	0/1:11,1:12:40.95:41,0,115	0/0:1,0:1:0.47:0,0,1
chr10	7180547	.	ACTCTCTCTCTCTCTTCCTCTCT	A	2124.52	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=0.197;DP=721;FS=0.000;HRun=0;HaplotypeScore=372.4398;InbreedingCoeff=0.7135;MQ=44.86;MQ0=48;MQRankSum=-1.299;QD=42.49;ReadPosRankSum=-2.106;VQSLOD=0.5832;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:36.06:0,36,801	0/0:16,0:16:20.68:0,21,153	0/0:123,0:22:29.24:0,29,425	0/0:141,0:29:19.66:0,20,511	0/0:28,0:27:0.44:0,0,2	0/0:13,0:11:30.10:0,30,685	0/0:11,0:11:17.44:0,17,419	0/0:18,0:17:29.85:0,30,221	0/0:17,0:16:33.42:0,33,1224	0/0:35,0:33:55.04:0,55,989	0/0:30,0:29:26.63:0,27,349	0/0:17,0:17:33.24:0,33,1113	0/0:16,0:16:33.02:0,33,921	0/0:19,0:19:32.07:0,32,846	0/0:21,0:21:15.54:0,16,143	0/0:13,0:12:24.52:0,25,905	0/1:14,0:14:7.29:7,0,678	0/0:10,0:10:19.19:0,19,170	0/0:10,0:8:11.68:0,12,408	0/0:25,0:23:26.01:0,26,665	0/0:8,0:8:0:0,0,0	0/0:29,0:28:38.89:0,39,599	0/0:28,0:28:29.08:0,29,855	0/0:5,0:5:9.02:0,9,192	0/0:21,0:21:28.04:0,28,764	1/1:5,13:19:42.06:1263,42,0	1/1:6,1:13:10.07:746,10,0	1/1:1,0:2:6.02:240,6,0
chr10	7180561	.	T	TC	2204.85	PASS	AB=0.834;AC=29;AF=0.518;AN=56;BaseQRankSum=-0.215;DP=662;FS=2.011;HRun=1;HaplotypeScore=221.4132;InbreedingCoeff=0.1133;MQ=41.17;MQ0=50;MQRankSum=-2.173;QD=5.91;ReadPosRankSum=1.069;VQSLOD=0.5082;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:20,0:20:10.49:10,0,17	1/1:5,3:15:19.34:112,19,0	0/0:83,0:14:24.93:0,25,311	0/0:105,0:22:39.73:0,40,411	1/1:9,8:26:4.42:17,4,0	1/1:10,7:15:6.24:128,6,0	0/1:3,6:11:2.18:188,0,2	1/1:13,0:20:7.20:262,7,0	0/1:8,9:18:8.34:219,0,8	1/1:12,6:29:6.89:202,7,0	1/1:10,11:29:33.85:273,34,0	0/0:17,0:18:15.30:0,15,77	1/1:14,0:17:1.43:11,1,0	0/0:13,0:14:2.51:0,3,18	1/1:5,10:20:19.45:231,19,0	1/1:1,12:12:28.25:286,28,0	0/1:5,6:11:56.96:114,0,57	0/1:7,1:11:22.14:37,0,22	0/1:8,2:8:48.13:50,0,48	0/1:11,13:24:54.67:106,0,55	0/0:1,3:12:0.47:0,0,1	0/1:27,0:26:16.28:23,0,16	0/0:25,0:25:8.16:0,8,47	0/0:7,0:9:0.51:0,1,2	0/1:12,6:21:11.76:71,0,12	0/0:16,1:16:22.85:0,23,113	0/1:10,0:13:13.65:24,0,14	0/1:4,0:4:3.32:9,0,3
chr10	7180563	.	C	CCT	3097.62	PASS	AB=0.924;AC=36;AF=0.643;AN=56;BaseQRankSum=-0.141;DP=670;FS=0.000;HRun=0;HaplotypeScore=224.8366;InbreedingCoeff=-0.1400;MQ=41.16;MQ0=51;MQRankSum=-2.500;QD=5.53;ReadPosRankSum=-0.897;VQSLOD=2.9912;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:14,9:22:25.44:375,25,0	1/1:15,0:15:1.83:57,2,0	0/1:84,0:13:0:0,0,0	0/0:99,0:19:5.56:0,6,75	0/1:27,0:27:0.49:1,0,0	0/1:17,0:15:62.30:62,0,63	0/1:11,0:11:18.95:19,0,60	1/1:24,0:21:11.11:134,11,0	0/1:19,0:18:27.67:28,0,102	0/1:30,0:29:3.68:79,0,4	0/1:33,0:32:3.71:59,0,4	0/1:6,12:18:20.21:404,0,20	1/1:9,8:17:39.09:555,39,0	0/1:6,8:14:8.11:302,0,8	1/1:17,0:19:7.64:33,8,0	0/1:13,0:12:8.40:8,0,20	0/1:12,0:12:5.18:5,0,91	1/1:15,0:14:5.82:40,6,0	0/0:11,0:8:0.96:0,1,111	0/1:26,0:25:34.22:34,0,203	0/1:13,0:12:0.01:0,0,0	1/1:24,7:29:8.70:309,9,0	0/1:16,11:25:0.76:404,0,1	1/1:8,1:9:6.02:82,6,0	0/1:21,0:21:17.79:18,0,71	0/1:18,0:16:15.14:74,0,15	1/1:13,0:13:8.80:119,9,0	1/1:4,0:4:2.88:39,3,0
chr10	7180573	.	T	TCC	1350.49	PASS	AB=0.970;AC=14;AF=0.250;AN=56;BaseQRankSum=3.512;DP=657;FS=2.949;HRun=1;HaplotypeScore=219.6270;InbreedingCoeff=-0.1374;MQ=37.29;MQ0=48;MQRankSum=-1.079;QD=5.08;ReadPosRankSum=2.761;VQSLOD=-0.1565;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:23:24.21:166,0,24	0/0:16,0:16:17.38:0,17,162	0/0:49,0:4:2.99:0,3,26	0/0:73,0:16:6.25:0,6,168	0/0:33,0:32:17.35:0,17,144	0/0:21,0:19:37.85:0,38,296	0/0:12,0:12:21.41:0,21,184	0/0:28,0:23:36.47:0,36,373	0/0:20,0:19:35.91:0,36,302	0/0:31,0:29:52.98:0,53,474	0/1:37,0:33:1.41:1,0,153	0/1:19,0:19:94.45:199,0,94	1/1:17,0:17:19.38:259,19,0	0/1:15,0:15:21.44:169,0,21	0/1:23,0:21:18.97:19,0,30	0/0:13,0:12:22.56:0,23,181	0/0:13,0:13:25.76:0,26,236	0/1:15,1:14:32.21:32,0,193	0/0:12,0:8:17.68:0,18,205	0/0:30,0:29:39.53:0,40,463	0/0:15,0:14:2.99:0,3,25	0/1:32,0:30:8.29:121,0,8	0/1:30,0:26:71.75:198,0,72	0/1:10,0:10:13.84:34,0,14	0/0:22,0:22:36.37:0,36,286	0/1:24,0:22:99:155,0,245	0/1:11,2:13:29.43:114,0,29	0/1:4,1:4:22.37:40,0,22
chr10	7180581	.	TTC	T	633.81	PASS	AB=0.910;AC=10;AF=0.179;AN=56;BaseQRankSum=5.464;DP=621;FS=17.897;HRun=0;HaplotypeScore=192.1978;InbreedingCoeff=-0.2308;MQ=38.94;MQ0=40;MQRankSum=-7.006;QD=2.46;ReadPosRankSum=-0.731;VQSLOD=1.0726;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:26:9.34:9,0,655	0/1:9,5:14:66.53:67,0,262	0/0:31,1:5:8.62:0,9,101	0/1:53,3:15:53.45:53,0,293	0/0:20,11:30:33.49:0,33,480	0/0:22,0:20:55.83:0,56,843	0/0:10,0:10:30.09:0,30,520	0/1:27,1:23:98.57:99,0,649	0/0:18,1:18:9.09:0,9,719	0/1:22,8:27:99:224,0,615	0/1:24,12:32:99:157,0,375	0/0:17,0:17:8.89:0,9,368	0/0:19,0:19:15.36:0,15,534	0/0:15,0:14:24.70:0,25,413	0/0:15,5:18:30.83:0,31,321	0/0:15,0:14:30.57:0,31,535	0/0:14,0:14:26.45:0,26,559	0/1:16,1:15:85.19:85,0,424	0/0:13,0:9:22.62:0,23,366	0/0:28,0:27:59.01:0,59,1074	0/0:15,2:16:6.51:0,7,150	0/0:29,0:27:29.97:0,30,759	0/0:32,1:29:13.03:0,13,738	0/0:9,0:8:18.01:0,18,222	0/0:20,0:20:51.45:0,51,840	0/1:24,1:23:25.42:25,0,573	0/1:17,0:17:40.12:40,0,381	0/1:6,0:5:16.01:16,0,56
chr10	7181865	.	T	TG	8938.01	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-14.404;DP=775;FS=4.954;HRun=1;HaplotypeScore=77.5228;InbreedingCoeff=0.9998;MQ=81.36;MQ0=0;MQRankSum=-1.512;QD=39.90;ReadPosRankSum=-0.881;VQSLOD=5.0482;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:58:99:0,169,2179	1/1:0,9:9:27.09:404,27,0	0/0:22,0:22:63.18:0,63,797	0/0:30,0:31:57.61:0,58,1030	1/1:1,17:18:42.14:627,42,0	0/0:24,0:24:72.22:0,72,921	0/0:22,0:22:57.18:0,57,738	1/1:3,32:35:93.31:1390,93,0	0/0:19,0:19:57.17:0,57,724	1/1:3,18:21:51.17:763,51,0	1/1:0,17:17:42.14:629,42,0	0/0:37,0:37:99:0,102,1325	0/0:22,0:22:63.20:0,63,818	0/0:36,0:36:99:0,99,1284	1/1:1,51:52:99:2068,138,0	0/0:42,0:42:99:0,126,1621	0/0:28,0:28:81.26:0,81,1052	1/1:1,13:14:39.13:585,39,0	0/0:30,0:30:84.26:0,84,1078	0/0:14,0:14:36.10:0,36,451	1/1:0,58:58:99:2472,165,0	0/0:22,0:22:63.20:0,63,818	0/0:13,0:13:39.11:0,39,492	0/0:41,0:41:99:0,114,1478	0/0:21,0:21:60.20:0,60,778	0/0:28,0:28:84.27:0,84,1091	0/0:28,0:28:78.25:0,78,1012	0/0:13,0:13:36.12:0,36,467
chr10	7183624	.	ACTACACTACC	A	15360.86	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=14.937;DP=758;FS=4.971;HRun=0;HaplotypeScore=243.8811;InbreedingCoeff=0.9973;MQ=58.30;MQ0=2;MQRankSum=-18.511;QD=71.45;ReadPosRankSum=4.248;VQSLOD=4.2526;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,123,6280	0/0:6,0:6:15.05:0,15,795	0/0:32,0:25:72.25:0,72,3441	0/0:36,0:29:78.16:0,78,3295	0/0:20,0:20:57.20:0,57,2776	1/1:2,31:33:78.27:2526,78,0	1/1:3,28:30:57.20:1798,57,0	0/0:32,0:32:90.31:0,90,4661	1/1:2,29:31:72.25:2354,72,0	0/0:29,0:29:87.29:0,87,4371	0/0:15,0:15:42.14:0,42,2167	0/0:31,0:31:93.30:0,93,4713	0/0:31,0:31:93.32:0,93,4846	0/0:27,0:27:75.20:0,75,3530	0/0:33,0:33:96.32:0,96,4784	1/1:1,28:29:78.27:2505,78,0	1/1:7,19:26:39.12:1284,39,0	0/0:15,0:15:45.15:0,45,2276	1/1:4,11:13:33.11:985,33,0	1/1:3,21:24:53.81:1778,54,0	0/0:42,0:42:99:0,120,6014	0/0:21,0:21:59.82:0,60,2847	0/0:20,0:20:54.19:0,54,2575	0/0:26,0:26:75.26:0,75,3849	1/1:1,25:26:66.23:2132,66,0	0/0:37,0:37:99:0,111,5610	0/0:34,0:34:95.89:0,96,4982	0/0:14,0:14:42.14:0,42,2094
chr10	7184671	.	GGTCT	G	2649.47	PASS	AB=0.596;AC=5;AF=0.089;AN=56;BaseQRankSum=7.110;DP=855;FS=1.712;HRun=0;HaplotypeScore=153.9237;InbreedingCoeff=0.8094;MQ=62.30;MQ0=0;MQRankSum=-1.045;QD=33.54;ReadPosRankSum=3.800;VQSLOD=4.0285;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:50:99:0,120,2805	0/0:16,0:16:45.15:0,45,1094	0/0:34,0:27:48.14:0,48,1110	0/0:17,0:12:24.08:0,24,552	0/0:34,0:34:54.90:0,55,1989	0/0:31,0:31:72.25:0,72,1677	0/0:32,0:32:75.13:0,75,1856	0/0:46,0:46:99:0,102,2440	0/0:34,0:34:81.28:0,81,1968	0/0:42,0:41:99:0,111,2711	0/0:30,0:30:62.19:0,62,1562	0/0:27,0:27:69.22:0,69,1671	0/0:32,0:32:87.30:0,87,2126	0/0:28,0:28:69.22:0,69,1604	0/0:31,0:31:78.25:0,78,1863	0/0:37,0:37:78.27:0,78,1945	0/0:28,0:28:69.24:0,69,1687	0/0:19,0:20:48.12:0,48,1084	0/0:29,0:29:66.23:0,66,1648	0/0:40,0:40:96.33:0,96,2363	0/0:23,0:25:60.20:0,60,1380	0/0:29,0:29:75.26:0,75,1844	0/0:22,0:22:60.20:0,60,1438	0/0:32,0:32:69.23:0,69,1703	0/0:30,0:30:69.24:0,69,1671	0/1:9,19:28:8.75:990,0,9	1/1:10,27:37:75.22:1243,75,0	1/1:2,12:14:33.11:547,33,0
chr10	7184724	.	ACGGTC	A	1607.26	PASS	AB=0.737;AC=7;AF=0.125;AN=56;BaseQRankSum=9.805;DP=771;FS=7.371;HRun=0;HaplotypeScore=204.8511;InbreedingCoeff=-0.0903;MQ=55.45;MQ0=2;MQRankSum=-7.799;QD=10.86;ReadPosRankSum=0.134;VQSLOD=1.9855;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:57:99:0,162,4184	0/1:5,7:12:6.62:260,0,7	0/0:34,0:22:66.21:0,66,1426	0/0:10,0:6:11.22:0,11,303	0/1:20,8:28:99:156,0,264	0/0:26,0:26:63.22:0,63,1579	0/0:33,0:33:69.22:0,69,1598	0/0:29,0:24:41.21:0,41,395	0/0:33,0:33:90.25:0,90,2132	0/1:22,11:33:99:560,0,158	0/1:15,8:23:99:158,0,161	0/0:28,0:28:84.29:0,84,2425	0/0:34,0:34:99:0,102,2765	0/0:23,0:23:69.24:0,69,1900	0/1:11,15:26:99:475,0,112	0/0:37,0:37:84.27:0,84,2009	0/0:30,0:30:75.17:0,75,1694	0/1:10,3:13:99:116,0,111	0/0:29,0:26:68.72:0,69,1498	0/0:27,0:27:51.22:0,51,1580	0/1:10,3:13:12.20:12,0,83	0/0:36,0:36:99:0,105,2916	0/0:19,0:19:49.01:0,49,1287	0/0:43,0:42:99:0,106,2941	0/0:23,0:23:54.19:0,54,1300	0/0:28,0:28:84.28:0,84,1961	0/0:32,0:30:87.25:0,87,2017	0/0:12,0:12:33.01:0,33,570
chr10	7184726	.	G	GGTCT	7517.34	PASS	AB=0.651;AC=21;AF=0.389;AN=54;BaseQRankSum=-7.263;DP=765;FS=0.429;HRun=0;HaplotypeScore=171.7437;InbreedingCoeff=0.8514;MQ=55.09;MQ0=2;MQRankSum=1.817;QD=23.79;ReadPosRankSum=-1.124;VQSLOD=4.4301;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:56:75.24:0,75,1149	0/0:11,0:11:18.36:0,18,156	0/0:32,0:20:20.94:0,21,239	0/0:10,0:5:6.02:0,6,80	0/0:26,0:26:8.99:0,9,55	1/1:12,14:27:30.10:709,30,0	1/1:18,16:34:18.06:426,18,0	./.	1/1:13,19:32:48.16:1135,48,0	0/0:31,0:31:36.02:0,36,329	0/0:21,0:21:12.23:0,12,97	0/0:28,0:28:54.16:0,54,801	0/0:33,0:33:57.19:0,57,886	0/0:23,0:23:33.11:0,33,516	0/0:26,0:26:35.28:0,35,259	1/1:18,20:38:30.10:709,30,0	0/1:13,15:28:10.78:744,0,11	0/0:13,0:13:6.89:0,7,58	1/1:18,8:27:33.57:683,34,0	1/1:14,13:28:27.09:607,27,0	0/0:13,0:13:0.47:0,0,1	0/0:35,0:35:57.13:0,57,836	0/0:18,0:18:31.32:0,31,428	0/0:43,0:43:68.81:0,69,985	1/1:10,11:23:27.09:638,27,0	1/1:15,1:30:54.18:951,54,0	1/1:24,0:34:48.12:790,48,0	1/1:8,0:10:8.99:124,9,0
chr10	7184731	.	GTCTGTCT	G	2313.29	PASS	AB=0.776;AC=9;AF=0.161;AN=56;BaseQRankSum=12.060;DP=748;FS=17.477;HRun=0;HaplotypeScore=225.5038;InbreedingCoeff=0.0869;MQ=53.69;MQ0=5;MQRankSum=-8.813;QD=14.19;ReadPosRankSum=0.621;VQSLOD=1.4596;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,144,4407	1/1:0,7:7:21.07:366,21,0	0/0:37,0:22:57.14:0,57,1475	0/0:12,0:7:21.07:0,21,513	0/1:17,8:25:99:189,0,424	0/0:27,0:27:63.21:0,63,1701	0/0:31,0:31:57.17:0,57,1417	0/1:31,0:26:3.20:3,0,619	0/0:30,0:30:78.26:0,78,2170	0/1:16,11:28:99:709,0,309	0/1:11,8:19:99:222,0,196	0/0:30,0:30:90.31:0,90,3076	0/0:33,0:33:99:0,99,2972	0/0:24,0:24:72.24:0,72,2079	0/1:9,15:24:99:699,0,233	0/0:36,0:36:78.25:0,78,2061	0/0:27,0:27:63.19:0,63,1706	0/1:11,3:14:99:224,0,176	0/0:29,0:27:78.26:0,78,1926	0/0:27,0:27:63.07:0,63,1603	0/1:12,3:15:43.32:43,0,170	0/0:35,0:35:93.32:0,93,3142	0/0:18,0:18:45.09:0,45,1510	0/0:46,0:45:99:0,115,3755	0/0:20,0:20:45.15:0,45,1195	0/0:27,0:27:81.27:0,81,2471	0/0:33,0:32:84.28:0,84,2374	0/0:9,0:9:21.07:0,21,488
chr10	7185043	.	C	CATGTGTATGTGT	3096.70	PASS	AC=24;AF=0.462;AN=52;BaseQRankSum=8.463;DP=1071;FS=6.169;HRun=0;HaplotypeScore=356.4282;InbreedingCoeff=0.8137;MQ=54.80;MQ0=22;MQRankSum=-2.060;QD=5.91;ReadPosRankSum=-2.131;VQSLOD=1.0350;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:69,0:69:99:0,156,3655	./.	0/0:35,0:15:15.01:0,15,234	0/0:31,0:11:22.82:0,23,314	1/1:9,0:31:0.71:1,1,0	0/0:17,0:17:30.07:0,30,679	0/0:45,0:45:90.25:0,90,2256	1/1:43,0:42:45.44:436,45,0	0/0:42,0:42:78.64:0,79,1970	1/1:17,0:44:62.44:577,62,0	./.	1/1:14,24:42:3.01:175,3,0	1/1:24,16:43:9.03:425,9,0	1/1:19,29:54:3.01:176,3,0	1/1:17,0:46:18.06:219,18,0	0/0:33,0:33:69.22:0,69,2071	0/0:46,0:46:99:0,105,2510	1/1:22,0:25:25.79:236,26,0	0/0:30,0:26:38.86:0,39,768	0/0:39,0:39:72.21:0,72,2039	1/1:24,0:55:0.64:1,1,0	1/1:21,16:42:1.09:2,1,0	1/1:18,18:39:2.18:175,2,0	1/1:56,0:56:41.32:856,41,0	0/0:34,0:34:72.24:0,72,2003	0/0:31,0:31:22.72:0,23,1773	0/0:43,0:43:78.21:0,78,2027	0/0:4,0:4:9.02:0,9,177
chr10	7186179	.	C	CT	1077.35	PASS	AB=1.000;AC=18;AF=0.346;AN=52;BaseQRankSum=-5.649;DP=436;FS=19.491;HRun=9;HaplotypeScore=64.7613;InbreedingCoeff=0.7413;MQ=30.84;MQ0=95;MQRankSum=1.575;QD=6.82;ReadPosRankSum=-3.344;VQSLOD=-0.3890;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:30:30.81:0,31,278	1/1:5,2:5:6.90:68,7,0	./.	./.	1/1:8,5:11:9.45:87,9,0	0/0:13,0:11:13.89:0,14,38	0/0:17,0:13:15.40:0,15,54	1/1:18,8:26:29.28:304,29,0	0/0:12,0:9:4.64:0,5,13	1/1:6,4:8:15.04:165,15,0	1/1:9,8:14:18.05:196,18,0	0/1:13,0:12:1.03:1,0,79	0/0:12,0:8:12.66:0,13,77	0/0:17,0:15:23.36:0,23,142	1/1:9,9:17:21.53:233,22,0	0/0:10,0:7:5.07:0,5,16	0/1:26,0:18:2.39:2,0,21	1/1:15,5:9:13.28:137,13,0	0/0:18,0:13:15.10:0,15,42	0/0:12,0:9:4.64:0,5,13	1/1:7,0:3:6.02:66,6,0	0/0:4,0:2:5.91:0,6,38	0/0:8,0:6:11.79:0,12,73	0/0:19,0:12:15.06:0,15,84	0/0:21,0:16:11.38:0,11,31	0/0:18,0:12:23.99:0,24,208	0/0:17,0:15:18.03:0,18,168	0/0:27,0:22:15.40:0,15,197
chr10	7186188	.	TC	T	2325.41	PASS	AB=0.961;AC=21;AF=0.404;AN=52;BaseQRankSum=-1.402;DP=378;FS=2.418;HRun=2;HaplotypeScore=45.2005;InbreedingCoeff=0.5499;MQ=35.07;MQ0=81;MQRankSum=-1.259;QD=11.74;ReadPosRankSum=-0.727;VQSLOD=1.7534;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:20:44.75:0,45,505	0/0:4,0:3:8.93:0,9,65	./.	./.	0/0:10,0:7:11.96:0,12,93	1/1:3,10:11:27.09:343,27,0	1/1:10,9:15:17.72:327,18,0	0/0:15,0:15:41.74:0,42,334	1/1:4,9:10:9.03:114,9,0	0/0:9,0:8:22.92:0,23,173	0/0:11,0:9:17.88:0,18,141	0/1:11,2:12:51.96:105,0,52	0/1:14,0:10:30.77:101,0,31	0/1:15,0:14:52.94:53,0,95	0/0:13,0:12:32.87:0,33,255	1/1:3,9:9:8.51:95,9,0	1/1:8,19:21:33.10:411,33,0	0/0:18,0:7:14.93:0,15,112	1/1:6,11:13:32.95:378,33,0	1/1:6,3:7:12:134,12,0	0/0:8,0:5:11.92:0,12,88	0/1:9,0:5:14.49:36,0,14	0/0:8,0:7:11.27:0,11,55	0/1:14,1:9:38.88:42,0,39	1/1:12,10:18:36:381,36,0	0/0:18,0:14:39.09:0,39,468	0/0:8,0:7:21.03:0,21,266	0/0:24,0:21:33.07:0,33,406
chr10	7187125	.	GA	G	3877.63	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=6.374;DP=632;FS=6.816;HRun=9;HaplotypeScore=71.5118;InbreedingCoeff=0.9740;MQ=81.89;MQ0=0;MQRankSum=-2.377;QD=22.94;ReadPosRankSum=1.758;VQSLOD=4.6017;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:19:47.97:0,48,534	0/0:12,0:12:30.09:0,30,346	0/0:21,0:21:10.76:0,11,318	0/0:15,0:15:5.53:0,6,278	0/0:42,0:42:99:0,114,1315	1/1:2,24:26:72.04:659,72,0	1/1:3,16:19:45.02:412,45,0	0/0:28,0:28:75.21:0,75,857	1/1:2,15:17:39.02:357,39,0	0/0:35,0:35:93.28:0,93,1072	0/0:26,1:27:29.69:0,30,585	0/0:19,0:19:51.15:0,51,588	0/0:20,0:20:57.17:0,57,658	0/0:20,0:20:57.17:0,57,658	0/0:26,0:26:66.18:0,66,750	1/1:0,23:24:68.07:610,68,0	1/1:3,19:22:42.01:384,42,0	0/0:16,0:16:45.13:0,45,518	1/1:0,9:9:27.01:247,27,0	1/1:3,27:30:72.03:659,72,0	0/0:17,0:17:48.14:0,48,554	0/0:24,0:24:66.20:0,66,761	0/0:27,0:27:75.21:0,75,857	0/0:22,0:22:54.16:0,54,623	1/1:1,21:22:60.03:549,60,0	0/0:23,0:23:63.19:0,63,726	0/0:32,0:32:87.25:0,87,994	0/0:18,0:18:48.12:0,48,542
chr10	7187607	.	AT	A	16631.97	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=6.180;DP=624;FS=4.767;HRun=2;HaplotypeScore=72.0617;InbreedingCoeff=0.9995;MQ=87.18;MQ0=0;MQRankSum=-5.130;QD=34.87;ReadPosRankSum=2.298;VQSLOD=5.4593;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:99:0,99,1455	1/1:0,9:9:27.09:350,27,0	0/0:21,0:21:43.27:0,43,687	0/0:29,0:29:73.58:0,74,1092	1/1:0,28:28:84.09:1007,84,0	1/1:0,26:26:69.22:894,69,0	1/1:0,24:24:63.20:817,63,0	1/1:0,33:33:96.25:1186,96,0	1/1:1,16:17:41.04:543,41,0	1/1:0,29:29:87.22:1050,87,0	1/1:1,25:26:69.18:876,69,0	1/1:0,16:16:33.03:428,33,0	1/1:0,18:18:48.11:604,48,0	1/1:1,19:20:54.18:700,54,0	1/1:0,19:19:51.17:662,51,0	1/1:1,24:25:63.20:817,63,0	1/1:0,22:22:60.20:778,60,0	1/1:0,16:16:39.13:506,39,0	1/1:0,28:28:84.25:1058,84,0	1/1:1,22:23:66.21:856,66,0	1/1:0,20:20:54.18:700,54,0	1/1:0,14:14:41.90:465,42,0	1/1:0,27:27:75.13:972,75,0	1/1:0,15:15:42.14:545,42,0	1/1:0,22:22:63.20:817,63,0	0/0:26,0:26:78.24:0,78,1113	0/0:28,0:28:84.26:0,84,1219	0/0:10,0:10:27.09:0,27,404
chr10	7189116	.	CT	C	1631.56	PASS	AB=0.720;AC=27;AF=0.482;AN=56;BaseQRankSum=4.971;DP=484;FS=9.681;HRun=14;HaplotypeScore=72.6524;InbreedingCoeff=0.5027;MQ=75.85;MQ0=1;MQRankSum=0.529;QD=6.23;ReadPosRankSum=1.062;VQSLOD=1.8719;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:43:88.32:0,88,759	1/1:2,4:6:10.95:68,11,0	0/0:29,1:18:19.21:0,19,110	0/1:27,1:19:6.42:6,0,23	1/1:4,5:9:6.73:72,7,0	0/0:19,1:20:21.41:0,21,329	0/0:18,0:18:13.83:0,14,249	1/1:10,8:19:6.47:156,6,0	0/0:9,0:9:21.02:0,21,195	0/1:6,9:16:2.09:122,0,2	1/1:1,8:11:21.40:134,21,0	0/1:2,6:9:13.89:54,0,14	0/1:4,7:12:6.34:98,0,6	1/1:6,10:14:14.83:103,15,0	1/1:4,8:12:17.82:123,18,0	0/0:12,0:14:26.81:0,27,225	0/0:29,2:32:40.15:0,40,617	1/1:8,22:32:32.76:354,33,0	0/0:9,0:10:18.21:0,18,171	0/1:9,2:11:2.57:3,0,118	1/1:12,8:20:0.47:103,0,0	0/1:3,6:9:9.98:85,0,10	1/1:5,6:11:8.86:62,9,0	1/1:5,18:24:18.82:266,19,0	0/0:15,0:16:27.34:0,27,238	0/1:12,2:17:21.18:21,0,115	0/0:16,0:16:27.01:0,27,245	0/0:14,0:14:20.90:0,21,170
chr10	7190080	.	G	GCTGTGTTCTAAGGAAC	32345.22	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-8.039;DP=500;FS=4.205;HRun=0;HaplotypeScore=209.4583;InbreedingCoeff=0.9872;MQ=88.42;MQ0=0;MQRankSum=-16.325;QD=180.70;ReadPosRankSum=0.134;VQSLOD=5.0762;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,5:17:36.12:2344,36,0	1/1:2,1:3:9.03:686,9,0	0/0:32,0:31:81.75:0,82,3173	0/0:14,0:14:31.59:0,32,1515	1/1:4,10:14:39.13:2679,39,0	0/0:23,0:23:66.21:0,66,2949	0/0:29,0:29:87.29:0,87,3952	1/1:12,0:12:33.10:1620,33,0	0/0:19,0:19:57.20:0,57,2691	1/1:11,11:23:60.13:4560,60,0	1/1:7,3:10:30.10:1727,30,0	0/0:32,0:32:93.30:0,93,4007	0/0:22,0:22:66.18:0,66,2825	0/0:16,0:16:45.15:0,45,2024	1/1:6,9:15:42.14:3013,42,0	0/0:9,0:9:27.08:0,27,1139	0/0:27,0:27:81.28:0,81,3666	1/1:10,7:16:39.09:2223,39,0	0/0:19,0:19:57.18:0,57,2345	0/0:17,0:17:51.18:0,51,2361	1/1:11,9:20:54.14:3217,54,0	0/0:20,0:20:60.21:0,60,2659	0/0:11,0:11:30.10:0,30,1467	0/0:17,0:17:48.15:0,48,2027	0/0:14,0:14:42.14:0,42,1668	1/1:6,10:17:51.18:3672,51,0	1/1:11,15:27:78.27:5796,78,0	1/1:1,3:4:12.04:810,12,0
chr10	7190148	.	A	AG	4106.26	PASS	AB=0.900;AC=17;AF=0.304;AN=56;BaseQRankSum=-8.024;DP=532;FS=0.395;HRun=6;HaplotypeScore=58.2983;InbreedingCoeff=0.8899;MQ=84.20;MQ0=0;MQRankSum=-3.130;QD=25.19;ReadPosRankSum=0.692;VQSLOD=3.4797;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:57.13:0,57,581	1/1:1,2:3:6.02:75,6,0	0/0:19,0:19:30.06:0,30,305	0/0:21,1:21:22.38:0,22,380	1/1:2,19:21:54.17:676,54,0	0/0:21,0:21:60.14:0,60,612	0/0:14,0:14:39.09:0,39,397	1/1:1,20:21:51.16:641,51,0	0/0:27,0:27:66.12:0,66,661	1/1:11,12:24:48.15:593,48,0	1/1:7,5:12:17.97:198,18,0	0/0:24,0:24:66.15:0,66,673	0/0:19,0:19:51.11:0,51,518	0/0:24,0:24:72.12:0,72,719	1/1:3,16:19:48.15:604,48,0	0/0:14,0:14:36.08:0,36,367	0/0:31,0:31:90.20:0,90,918	1/1:2,14:16:36.12:453,36,0	0/0:19,0:19:48.04:0,48,470	0/0:14,0:14:33.07:0,33,336	1/1:4,25:29:66.21:830,66,0	0/0:17,0:17:42.05:0,42,414	0/0:6,0:6:18.03:0,18,178	0/0:24,0:24:60.11:0,60,605	0/0:20,0:20:57.13:0,57,581	0/1:16,2:18:36.40:36,0,297	0/0:27,0:27:69.11:0,69,692	0/0:4,0:4:12.03:0,12,122
chr10	7192731	.	TTTTCCCTTC	T	15504.45	PASS	AB=0.957;AC=33;AF=0.611;AN=54;BaseQRankSum=15.717;DP=535;FS=0.364;HRun=0;HaplotypeScore=184.1530;InbreedingCoeff=0.9068;MQ=86.40;MQ0=0;MQRankSum=-15.646;QD=51.51;ReadPosRankSum=3.450;VQSLOD=4.2109;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,25:30:63.17:1792,63,0	./.	0/0:32,0:32:75.26:0,75,3124	0/0:25,0:23:51.14:0,51,2003	1/1:2,8:10:17.67:532,18,0	1/1:7,23:30:54.19:1599,54,0	1/1:3,16:19:45.15:1318,45,0	1/1:7,18:25:54.14:1345,54,0	1/1:2,17:18:33.11:977,33,0	1/1:4,13:17:39.13:1148,39,0	1/1:2,7:9:21.07:618,21,0	0/0:26,0:26:78.27:0,78,3590	0/0:35,0:35:99:0,99,4490	0/0:24,0:24:66.23:0,66,3127	1/1:2,20:22:48.16:1419,48,0	1/1:6,21:27:48.11:1420,48,0	1/1:5,9:14:21.07:622,21,0	1/1:1,9:10:12.04:355,12,0	1/1:8,10:18:30.09:825,30,0	1/1:2,8:10:21.07:621,21,0	1/1:5,5:10:10.76:353,11,0	0/0:13,0:13:36.12:0,36,1604	0/0:17,0:17:45.15:0,45,2138	0/0:28,0:28:60.16:0,60,2629	1/1:3,6:9:18.06:533,18,0	0/1:21,1:22:28.62:29,0,2568	0/0:24,0:24:69.24:0,69,3176	0/0:10,0:10:21.07:0,21,907
chr10	7193598	.	CTT	C	7527.82	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=9.902;DP=426;FS=0.000;HRun=10;HaplotypeScore=52.6438;InbreedingCoeff=0.9629;MQ=68.73;MQ0=4;MQRankSum=0.299;QD=24.76;ReadPosRankSum=1.227;VQSLOD=4.0742;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,31:38:93.24:1037,93,0	1/1:0,7:7:21.06:234,21,0	0/0:14,0:11:8.80:0,9,148	0/0:7,0:5:14.08:0,14,151	1/1:3,13:16:33.06:368,33,0	1/1:1,14:14:30.08:334,30,0	1/1:2,7:9:15.03:166,15,0	1/1:11,22:32:63.09:702,63,0	1/1:1,5:6:15.04:167,15,0	1/1:2,14:16:39.07:425,39,0	1/1:4,9:13:24.05:268,24,0	0/0:9,0:8:24.08:0,24,376	0/0:8,0:8:18.04:0,18,262	0/0:11,0:11:30.10:0,30,476	1/1:1,7:8:21.05:234,21,0	1/1:1,7:8:18.04:201,18,0	1/1:5,33:38:81.16:888,81,0	1/1:0,31:31:72.19:803,72,0	1/1:5,9:14:27.04:301,27,0	1/1:0,10:10:30.08:333,30,0	1/1:4,7:11:21.05:234,21,0	0/0:2,0:2:6.02:0,6,95	0/0:8,0:8:21.07:0,21,329	0/0:10,0:10:27.09:0,27,426	1/1:3,26:29:75.20:834,75,0	0/0:17,0:17:48.13:0,48,729	0/0:11,0:11:33.10:0,33,503	0/0:25,0:25:75.26:0,75,1186
chr10	7193775	.	A	AT	10940.87	PASS	AB=0.531;AC=33;AF=0.589;AN=56;BaseQRankSum=-7.313;DP=501;FS=6.915;HRun=1;HaplotypeScore=58.7003;InbreedingCoeff=0.9447;MQ=53.80;MQ0=40;MQRankSum=0.477;QD=33.15;ReadPosRankSum=0.454;VQSLOD=3.9779;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,38:41:56.08:1235,56,0	1/1:0,5:5:15.05:225,15,0	0/0:20,0:6:15.05:0,15,195	0/0:39,0:13:36.06:0,36,427	1/1:2,11:12:33.07:470,33,0	1/1:2,24:26:54.14:784,54,0	0/1:2,15:17:1:458,0,1	1/1:7,34:30:78.23:1144,78,0	1/1:0,11:11:27.09:404,27,0	1/1:1,9:10:27.09:405,27,0	1/1:0,10:10:27.09:405,27,0	0/0:12,0:12:33.11:0,33,428	0/0:8,0:8:18.06:0,18,234	0/0:13,0:12:30.10:0,30,389	1/1:1,11:12:21.07:314,21,0	1/1:1,16:17:36.09:516,36,0	1/1:1,23:24:26.09:862,26,0	1/1:0,34:34:78.23:1139,78,0	1/1:4,15:16:45.15:674,45,0	1/1:0,13:13:36.08:515,36,0	1/1:1,19:18:54.18:809,54,0	0/0:4,0:4:12.04:0,12,156	0/0:6,0:6:15.05:0,15,195	0/0:26,0:23:51.07:0,51,662	1/1:0,17:17:39.13:584,39,0	0/0:14,0:13:39.13:0,39,506	0/0:17,0:17:48.16:0,48,618	0/0:12,0:12:27.09:0,27,350
chr10	7196501	.	AAAGG	A	8135.91	PASS	AB=0.909;AC=35;AF=0.625;AN=56;BaseQRankSum=3.426;DP=699;FS=5.112;HRun=0;HaplotypeScore=142.0738;InbreedingCoeff=0.8706;MQ=59.99;MQ0=5;MQRankSum=-3.515;QD=17.16;ReadPosRankSum=0.494;VQSLOD=4.2627;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:18,31:49:69.23:1097,69,0	1/1:2,9:11:21.07:323,21,0	0/0:13,0:7:3.01:0,3,72	0/0:16,0:8:4.83:0,5,71	1/1:10,17:27:48.16:748,48,0	1/1:7,0:18:24.03:224,24,0	1/1:17,0:33:29.70:279,30,0	1/1:16,8:23:24.07:328,24,0	1/1:11,0:26:24.03:223,24,0	1/1:7,22:29:66.18:1001,66,0	1/1:10,21:31:54.18:824,54,0	0/0:11,0:26:33.11:0,33,578	0/0:16,0:35:42.11:0,42,674	0/0:8,0:27:42.14:0,42,707	1/1:11,18:29:36.12:578,36,0	1/1:5,0:24:24.03:224,24,0	1/1:17,0:27:15:140,15,0	1/1:7,20:27:48.16:771,48,0	1/1:16,0:24:21.91:196,22,0	1/1:7,0:28:49.24:433,49,0	1/1:3,9:12:24.08:385,24,0	0/0:6,0:23:51.13:0,51,840	0/0:4,0:20:30.04:0,30,434	0/0:12,0:29:36.11:0,36,602	1/1:3,0:23:33.04:307,33,0	0/1:27,3:29:55.02:55,0,1121	0/0:28,0:28:63.22:0,63,1401	0/0:8,0:8:15.05:0,15,359
chr10	7201368	.	TGC	T	2402.94	PASS	AB=0.957;AC=15;AF=0.268;AN=56;BaseQRankSum=4.912;DP=614;FS=15.558;HRun=0;HaplotypeScore=135.8177;InbreedingCoeff=0.6648;MQ=56.01;MQ0=8;MQRankSum=-0.347;QD=12.08;ReadPosRankSum=0.872;VQSLOD=2.6254;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:31,0:31:65.76:558,66,0	0/0:7,0:7:15.05:0,15,281	0/0:25,0:12:34.24:0,34,539	0/0:27,0:15:39.07:0,39,592	0/0:17,0:17:39.08:0,39,645	0/1:12,0:12:14.53:118,0,15	1/1:20,0:20:9.20:225,9,0	0/0:29,0:28:63.82:0,64,1049	1/1:31,4:35:62.12:536,62,0	0/0:23,0:23:37.06:0,37,877	0/0:12,0:11:24.07:0,24,409	0/0:26,0:26:33.02:0,33,488	0/0:18,0:18:35.12:0,35,483	0/0:17,0:17:12.04:0,12,206	0/0:17,0:17:42.10:0,42,621	1/1:0,13:14:8.94:102,9,0	0/1:46,3:49:99:471,0,135	0/0:29,0:29:54.41:0,54,1005	1/1:8,0:8:23.34:199,23,0	0/1:12,1:13:29.22:162,0,29	0/0:40,0:40:59.99:0,60,1314	0/0:19,0:19:18.06:0,18,296	0/0:9,0:9:6.02:0,6,94	0/0:29,0:29:21:0,21,299	1/1:15,2:17:7.88:217,8,0	0/0:38,0:38:81.80:0,82,1440	0/0:25,0:25:21.52:0,22,320	0/0:8,0:8:15.02:0,15,196
chr10	7201372	.	TGC	T	2639.99	PASS	AB=0.953;AC=19;AF=0.339;AN=56;BaseQRankSum=4.216;DP=601;FS=21.340;HRun=0;HaplotypeScore=132.1263;InbreedingCoeff=0.3400;MQ=54.45;MQ0=9;MQRankSum=-0.555;QD=8.20;ReadPosRankSum=-1.424;VQSLOD=1.7764;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:29:65.32:559,65,0	0/0:7,0:7:14.98:0,15,149	0/0:24,0:11:16.27:0,16,215	0/0:24,0:12:25.92:0,26,255	0/0:15,0:15:35.68:0,36,274	0/1:11,0:11:14.53:118,0,15	1/1:20,0:20:6.16:219,6,0	0/1:24,8:31:74.85:75,0,287	1/1:33,3:36:62.13:539,62,0	0/0:22,0:22:1.87:0,2,416	0/0:11,0:10:23.81:0,24,229	0/0:24,0:24:26.83:0,27,208	0/0:19,0:19:38.59:0,39,411	0/0:16,0:16:8.97:0,9,71	0/0:19,0:19:37.69:0,38,375	1/1:15,0:15:8.96:103,9,0	0/1:48,0:48:99:474,0,135	0/1:26,2:28:75.25:75,0,392	1/1:9,0:9:23.45:201,23,0	0/1:13,0:13:27.77:184,0,28	0/1:41,1:41:32.64:33,0,472	0/0:17,0:17:17.85:0,18,130	0/0:8,0:8:3.01:0,3,32	0/0:30,0:30:20.91:0,21,219	1/1:15,1:16:7.87:215,8,0	0/0:35,0:35:69.62:0,70,738	0/1:22,1:23:29.96:30,0,117	0/0:8,0:8:11.90:0,12,119
chr10	7201374	.	C	CGT	1817.81	PASS	AB=0.859;AC=28;AF=0.560;AN=50;BaseQRankSum=-2.839;DP=611;FS=4.205;HRun=0;HaplotypeScore=143.5735;InbreedingCoeff=-0.2869;MQ=53.30;MQ0=13;MQRankSum=-0.783;QD=3.87;ReadPosRankSum=-1.578;VQSLOD=2.6208;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:2.84:0,3,27	1/1:4,1:5:3.01:45,3,0	./.	./.	1/1:13,3:16:5.45:70,5,0	0/1:11,0:11:26.55:35,0,27	0/1:20,0:20:16.95:17,0,19	1/1:31,0:30:3.95:138,4,0	0/1:36,0:36:9.73:35,0,10	0/1:16,7:23:44.41:132,0,44	0/1:7,5:11:53.24:69,0,53	1/1:22,0:22:5.98:54,6,0	0/1:19,0:19:27.82:28,0,113	./.	0/1:9,9:21:42.23:214,0,42	0/0:15,0:15:7.58:0,8,29	0/1:46,0:46:11.42:11,0,172	0/1:20,8:29:18.57:464,0,19	1/1:10,0:10:7.22:40,7,0	0/1:14,0:14:17.43:17,0,52	0/1:44,0:42:6.01:243,0,6	0/0:17,0:17:2.78:0,3,24	1/1:8,0:8:2.97:20,3,0	0/1:31,0:31:7.92:8,0,74	0/0:16,0:16:8.35:0,8,47	0/1:8,1:38:18.36:119,0,18	1/1:7,1:25:17.88:158,18,0	0/1:2,0:8:24.03:47,0,24
chr10	7201382	.	T	TGTGCGTGCGTGCGTGCGTGC	2265.32	PASS	AB=0.525;AC=11;AF=0.196;AN=56;BaseQRankSum=-3.634;DP=619;FS=13.278;HRun=0;HaplotypeScore=309.0594;InbreedingCoeff=0.7984;MQ=50.02;MQ0=15;MQRankSum=-0.503;QD=16.18;ReadPosRankSum=-1.970;VQSLOD=0.5964;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:61.54:0,62,1590	0/0:4,0:4:6.02:0,6,232	0/0:22,0:6:9.01:0,9,154	0/0:18,0:4:6.02:0,6,120	0/0:18,0:18:40.49:0,40,1144	0/0:13,0:13:25.80:0,26,883	0/0:21,0:21:44.51:0,45,1081	0/0:30,0:29:81.24:0,81,1500	0/0:35,0:35:70.42:0,70,2364	0/0:22,0:22:54.14:0,54,1324	0/0:12,0:11:21.07:0,21,693	1/1:24,0:24:13.71:316,14,0	1/1:22,0:22:44.61:1141,45,0	1/1:19,0:19:18.49:245,18,0	0/0:20,0:20:35.81:0,36,1157	0/0:16,0:16:8.73:0,9,377	0/0:43,0:43:99:0,115,4001	0/0:28,0:28:35.43:0,35,1488	0/0:12,0:11:31.62:0,32,597	0/0:15,0:15:36.10:0,36,1127	0/0:41,0:39:73.31:0,73,1700	1/1:20,0:20:17.96:202,18,0	0/1:2,15:20:20.15:238,0,20	1/1:34,0:34:13.71:297,14,0	0/0:15,0:15:23.32:0,23,562	0/0:33,0:33:39.69:0,40,1744	0/0:26,0:25:27.21:0,27,332	0/0:6,0:6:9.03:0,9,114
chr10	7201384	.	T	TGCGTGCGTGCGTGCGTGC	1463.75	PASS	AB=1.000;AC=8;AF=0.143;AN=56;BaseQRankSum=-0.747;DP=620;FS=17.676;HRun=0;HaplotypeScore=290.8004;InbreedingCoeff=0.2914;MQ=48.52;MQ0=17;MQRankSum=-1.977;QD=10.09;ReadPosRankSum=-1.310;VQSLOD=0.8612;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:62.80:0,63,1701	0/0:4,0:4:6.02:0,6,234	0/0:20,0:4:11.99:0,12,174	0/0:20,0:3:6.02:0,6,120	0/0:18,0:18:42.05:0,42,1269	0/0:12,0:12:27.92:0,28,888	0/0:22,0:22:47.87:0,48,1145	0/0:32,0:30:87.11:0,87,1657	0/0:35,0:35:65.13:0,65,2388	0/0:20,0:20:54.06:0,54,1368	0/0:12,0:11:21.07:0,21,737	0/1:26,0:26:33.62:273,0,34	0/1:22,0:22:49.50:813,0,49	0/1:21,0:21:17.18:135,0,17	0/0:20,0:20:35.98:0,36,1189	0/0:15,0:15:8.81:0,9,368	0/0:43,0:43:99:0,115,3995	0/0:27,0:27:29.43:0,29,1457	0/0:12,0:11:31.65:0,32,670	0/0:15,0:15:36.11:0,36,1145	0/0:42,0:40:73.40:0,73,1757	0/1:18,0:18:34.56:84,0,35	1/1:22,0:20:5.04:214,5,0	1/1:17,9:36:8.70:80,9,0	0/0:15,0:15:23.54:0,24,573	0/0:33,0:33:74.77:0,75,1935	0/0:24,0:23:27.08:0,27,327	0/0:6,0:6:9.01:0,9,146
chr10	7202104	.	C	CCTGCCACATTGTAACG	9996.63	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=2.106;DP=689;FS=0.000;HRun=0;HaplotypeScore=289.3632;InbreedingCoeff=0.9310;MQ=76.91;MQ0=0;MQRankSum=-6.281;QD=42.90;ReadPosRankSum=-1.671;VQSLOD=3.3216;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,17:40:33.11:1737,33,0	0/0:9,0:9:17.91:0,18,308	0/0:30,0:29:24.06:0,24,278	0/0:26,0:25:30.06:0,30,335	0/0:28,0:28:28.35:0,28,302	1/1:12,7:22:12.04:801,12,0	1/1:35,0:35:71.87:1508,72,0	0/0:25,0:25:23.97:0,24,211	1/1:34,0:34:53.48:1399,53,0	0/0:23,0:23:36.84:0,37,743	0/0:6,0:6:3.41:0,3,19	0/0:34,0:34:72.05:0,72,1513	0/0:26,0:26:51.08:0,51,1167	0/0:26,0:26:51.13:0,51,1649	0/0:38,0:38:96.23:0,96,2769	1/1:39,0:39:88.70:3125,89,0	1/1:17,0:17:20.82:444,21,0	0/0:29,0:29:60.11:0,60,1912	1/1:15,7:25:32.43:864,32,0	1/1:14,0:14:10.11:68,10,0	0/0:32,0:32:60.63:0,61,1723	0/0:25,0:25:33.53:0,34,391	0/0:11,0:11:19.21:0,19,417	0/0:30,0:30:69.17:0,69,2454	1/1:7,0:7:3.01:50,3,0	0/0:20,0:20:33.05:0,33,900	0/0:26,0:26:45.05:0,45,992	0/0:12,0:12:36.09:0,36,1344
chr10	7202387	.	G	GGCTGATATTTGAGG	1684.55	PASS	AB=0.701;AC=34;AF=0.944;AN=36;BaseQRankSum=-2.757;DP=42;FS=10.981;HRun=0;HaplotypeScore=25.0537;InbreedingCoeff=-0.2331;MQ=102.47;MQ0=1;MQRankSum=-2.471;QD=41.09;ReadPosRankSum=-1.540;VQSLOD=0.7318;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,0:2:3.01:47,3,0	./.	0/1:2,1:6:10.41:585,0,10	0/1:7,0:6:17.19:80,0,17	1/1:2,0:2:6.02:144,6,0	./.	1/1:1,0:1:3.01:59,3,0	1/1:1,0:1:3:27,3,0	1/1:1,0:1:3.01:86,3,0	./.	./.	./.	./.	./.	1/1:1,0:1:2.97:20,3,0	1/1:1,0:1:3.01:50,3,0	1/1:3,0:3:3.01:57,3,0	1/1:1,0:1:2.99:24,3,0	1/1:3,0:3:9.03:176,9,0	1/1:1,0:1:3.01:49,3,0	1/1:3,0:3:3.01:110,3,0	1/1:1,0:1:3.01:50,3,0	./.	./.	1/1:1,0:1:3.01:67,3,0	1/1:1,0:1:3.01:86,3,0	1/1:2,0:2:3.01:58,3,0	./.
chr10	7203081	.	TC	T	10225.33	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=15.092;DP=786;FS=0.271;HRun=3;HaplotypeScore=81.8403;InbreedingCoeff=0.9996;MQ=87.84;MQ0=0;MQRankSum=-1.403;QD=34.90;ReadPosRankSum=1.488;VQSLOD=5.3477;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,64:64:99:2231,181,0	0/0:14,0:14:42.06:0,42,556	0/0:34,0:34:99:0,99,1358	0/0:22,0:22:54.15:0,54,743	0/0:21,0:21:63.14:0,63,880	1/1:1,18:19:54.17:669,54,0	1/1:0,36:36:99:1302,105,0	0/0:40,0:40:99:0,117,1651	1/1:0,33:33:90.28:1116,90,0	0/0:19,0:19:57.19:0,57,820	0/0:14,0:14:39.13:0,39,562	0/0:29,0:29:84.27:0,84,1186	0/0:28,0:28:81.21:0,81,1109	0/0:32,0:32:96.31:0,96,1362	0/0:43,0:43:99:0,129,1778	1/1:0,37:37:99:1265,102,0	1/1:1,28:29:75.24:930,75,0	0/0:16,0:16:48.16:0,48,690	1/1:0,20:20:60.19:744,60,0	1/1:1,28:29:84.26:1040,84,0	0/0:44,0:44:99:0,129,1813	0/0:21,0:21:63.21:0,63,907	0/0:10,0:10:30.07:0,30,409	0/0:32,0:32:96.31:0,96,1362	1/1:0,26:26:75.24:929,75,0	0/0:21,0:21:63.21:0,63,907	0/0:45,0:44:99:0,135,1940	0/0:8,0:8:24.08:0,24,345
chr10	7203540	.	AT	A	7857.82	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=14.041;DP=687;FS=0.000;HRun=10;HaplotypeScore=68.2159;InbreedingCoeff=0.9952;MQ=72.33;MQ0=0;MQRankSum=-0.277;QD=21.35;ReadPosRankSum=3.485;VQSLOD=5.6751;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,23:25:65.98:573,66,0	0/0:9,0:9:21.04:0,21,223	0/0:17,0:15:29.77:0,30,280	0/0:14,0:14:12.21:0,12,176	0/0:40,0:40:99:0,105,1153	1/1:2,19:21:53.99:469,54,0	1/1:0,24:24:56.99:495,57,0	0/0:31,0:31:72.17:0,72,772	1/1:2,25:27:74.97:651,75,0	0/0:36,0:36:99:0,105,1161	0/0:25,0:25:57.15:0,57,630	1/1:3,22:25:56.99:495,57,0	1/1:8,20:28:44.08:479,44,0	1/1:1,27:29:62.02:527,62,0	0/0:24,0:25:60.10:0,60,643	1/1:1,21:22:59.71:521,60,0	1/1:0,31:31:80.98:703,81,0	0/0:19,0:19:51.05:0,51,537	1/1:3,27:30:77.86:656,78,0	1/1:1,28:29:80.74:683,81,0	0/0:19,0:19:45.11:0,45,487	1/1:4,16:20:44.92:382,45,0	1/1:3,17:20:47.99:417,48,0	1/1:0,12:12:29.99:260,30,0	1/1:3,22:25:62.98:547,63,0	0/0:39,1:40:82.24:0,82,1135	0/0:29,0:29:75:0,75,793	0/0:15,0:15:45.12:0,45,498
chr10	7203802	.	C	CA	12335.21	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-4.403;DP=829;FS=20.545;HRun=1;HaplotypeScore=98.4847;InbreedingCoeff=0.9972;MQ=70.97;MQ0=0;MQRankSum=-2.914;QD=42.10;ReadPosRankSum=1.347;VQSLOD=2.8425;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,63:68:99:2792,193,0	0/0:9,0:9:24.05:0,24,294	0/0:31,0:31:90.27:0,90,1148	0/0:32,0:32:87.28:0,87,1123	0/0:31,0:31:90.29:0,90,1168	1/1:2,24:26:75.25:1122,75,0	1/1:1,36:37:99:1619,108,0	0/0:22,0:22:63.19:0,63,804	1/1:3,21:24:66.21:969,66,0	0/0:40,0:40:99:0,114,1480	0/0:30,0:30:84.26:0,84,1077	0/0:25,0:25:75.23:0,75,958	0/0:19,0:19:54.18:0,54,701	0/0:40,0:40:99:0,111,1427	0/0:44,0:44:99:0,114,1480	1/1:2,25:27:81.26:1178,81,0	1/1:3,32:35:99:1484,99,0	0/0:32,0:32:84.26:0,84,1075	1/1:0,23:23:69.23:1034,69,0	1/1:6,20:26:72.17:1012,72,0	0/0:43,0:43:99:0,114,1464	0/0:23,0:23:69.22:0,69,895	0/0:20,0:20:60.19:0,60,777	0/0:30,0:30:87.28:0,87,1130	1/1:1,25:26:78.21:1125,78,0	0/0:29,0:29:78.25:0,78,1012	0/0:31,0:31:81.25:0,81,1052	0/0:5,0:5:15.05:0,15,194
chr10	7203887	.	T	TG	31154.27	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-7.429;DP=833;FS=11.033;HRun=1;HaplotypeScore=93.4250;InbreedingCoeff=0.9997;MQ=66.18;MQ0=2;MQRankSum=-4.753;QD=40.04;ReadPosRankSum=6.956;VQSLOD=3.8309;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,65:69:99:2766,190,0	1/1:0,12:12:33.11:494,33,0	0/0:29,1:30:39.21:0,39,951	0/0:25,0:25:72.23:0,72,919	1/1:1,26:26:72.24:1079,72,0	1/1:1,28:29:72.24:1079,72,0	1/1:1,32:33:96.28:1414,96,0	1/1:3,37:40:99:1644,111,0	1/1:2,27:29:72.24:1078,72,0	1/1:1,17:18:51.17:761,51,0	1/1:1,22:23:57.19:854,57,0	1/1:1,35:36:99:1524,102,0	1/1:3,29:32:90.29:1329,90,0	1/1:1,29:30:75.25:1124,75,0	1/1:0,32:32:90.30:1347,90,0	1/1:3,27:29:81.27:1213,81,0	1/1:2,36:38:99:1459,99,0	1/1:2,25:27:69.23:1034,69,0	1/1:7,9:15:39.11:560,39,0	1/1:1,21:22:54.17:790,54,0	1/1:1,64:64:99:2608,175,0	1/1:0,24:24:69.23:1032,69,0	1/1:2,12:14:35.61:502,36,0	1/1:1,37:39:99:1651,111,0	1/1:0,26:26:69.23:1034,69,0	1/1:0,30:30:90.30:1346,90,0	1/1:1,19:20:48.16:711,48,0	1/1:0,17:17:48.16:719,48,0
chr10	7204502	.	C	CA	9660.28	PASS	AB=0.914;AC=53;AF=0.946;AN=56;BaseQRankSum=1.457;DP=702;FS=8.097;HRun=1;HaplotypeScore=150.5359;InbreedingCoeff=0.7191;MQ=79.31;MQ0=0;MQRankSum=-7.443;QD=14.08;ReadPosRankSum=3.291;VQSLOD=4.1790;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:41,0:41:99:546,113,0	1/1:14,0:14:23.70:147,24,0	0/1:29,3:32:6.14:6,0,523	0/0:16,0:15:29.89:0,30,305	1/1:36,1:37:95.64:471,96,0	1/1:27,0:27:71.81:362,72,0	1/1:16,0:16:41.84:238,42,0	1/1:36,0:36:99:757,105,0	1/1:21,0:21:51.35:268,51,0	1/1:28,0:28:79.16:545,79,0	1/1:17,0:17:39.93:194,40,0	1/1:19,0:19:53.10:258,53,0	1/1:42,0:42:99:570,112,0	1/1:25,0:25:68.11:338,68,0	1/1:25,0:25:68.41:368,68,0	1/1:27,0:27:74.43:406,74,0	1/1:31,0:31:85.50:489,86,0	1/1:19,0:19:52.92:258,53,0	1/1:20,0:20:53.53:327,54,0	1/1:34,0:34:92.68:458,93,0	1/1:21,0:21:57.01:308,57,0	1/1:23,0:23:60.13:318,60,0	1/1:28,0:28:79.31:436,79,0	1/1:19,0:19:53.68:266,54,0	1/1:17,0:17:49.12:288,49,0	1/1:36,0:36:99:682,106,0	1/1:26,0:25:58.30:303,58,0	1/1:5,0:5:12.83:51,13,0
chr10	7204738	.	CA	C	2334.30	PASS	AB=0.939;AC=20;AF=0.357;AN=56;BaseQRankSum=6.771;DP=582;FS=2.772;HRun=12;HaplotypeScore=61.3670;InbreedingCoeff=0.7469;MQ=63.81;MQ0=0;MQRankSum=-1.651;QD=10.28;ReadPosRankSum=0.704;VQSLOD=3.0245;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:43:83.41:0,83,936	1/1:2,6:8:11.93:93,12,0	0/1:10,1:7:9.05:9,0,66	0/1:8,0:4:2.66:3,0,45	1/1:4,25:29:74.68:580,75,0	0/0:23,0:26:59.95:0,60,588	0/0:28,0:28:72.13:0,72,725	1/1:9,15:24:35.76:271,36,0	0/0:17,0:17:45.09:0,45,456	1/1:0,13:15:36.94:267,37,0	1/1:2,12:14:32.85:255,33,0	0/0:18,0:18:39.06:0,39,385	0/0:24,2:27:16.41:0,16,485	0/0:18,0:18:39.04:0,39,375	1/1:3,12:15:8.39:248,8,0	0/0:19,0:19:45.55:0,46,452	0/0:31,0:31:71.93:0,72,691	1/1:0,20:20:53.79:418,54,0	0/1:18,2:20:7.40:7,0,296	0/0:22,0:23:47.92:0,48,465	1/1:3,17:22:51.89:383,52,0	0/0:11,0:11:21.53:0,22,254	0/0:26,0:26:60.07:0,60,584	0/0:28,0:28:60.09:0,60,596	0/0:15,0:15:32.99:0,33,310	0/1:35,3:40:0:0,0,683	0/0:16,1:16:12.79:0,13,292	0/0:5,0:8:20.71:0,21,181
chr10	7206430	.	A	ATT	9905.05	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-1.822;DP=336;FS=1.494;HRun=7;HaplotypeScore=88.1609;InbreedingCoeff=0.8421;MQ=60.90;MQ0=0;MQRankSum=-6.713;QD=31.54;ReadPosRankSum=1.249;VQSLOD=4.8416;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,20:24:59.95:808,60,0	1/1:1,3:4:8.99:118,9,0	0/0:11,0:11:30.07:0,30,338	0/0:11,0:11:17.05:0,17,164	1/1:3,13:16:32.84:341,33,0	1/1:6,5:11:24.05:350,24,0	1/1:8,14:23:50.53:698,51,0	1/1:3,6:9:24.08:389,24,0	1/1:5,12:17:44.91:553,45,0	1/1:1,6:7:18.06:295,18,0	1/1:0,6:6:17.98:236,18,0	1/1:5,0:11:27.07:315,27,0	1/1:4,0:13:30.06:312,30,0	1/1:0,0:9:24.05:252,24,0	1/1:5,12:17:47.88:560,48,0	1/1:1,10:11:33.04:474,33,0	1/1:3,15:18:42.10:651,42,0	1/1:0,5:5:15.01:217,15,0	1/1:10,12:22:45.15:714,45,0	1/1:5,13:18:47.80:511,48,0	1/1:2,6:8:20.99:286,21,0	1/1:1,0:13:39.06:459,39,0	1/1:2,0:12:30.07:331,30,0	1/1:1,0:12:27.06:298,27,0	1/1:3,5:10:23.99:308,24,0	1/1:4,0:14:30.05:290,30,0	1/1:0,0:3:9.02:97,9,0	1/1:0,0:1:3.01:41,3,0
chr10	7207434	.	G	GCC	7087.73	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-13.336;DP=633;FS=2.028;HRun=7;HaplotypeScore=73.1348;InbreedingCoeff=0.9672;MQ=75.74;MQ0=0;MQRankSum=-1.049;QD=34.57;ReadPosRankSum=0.257;VQSLOD=4.7927;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,0:25:3:29,3,0	0/0:15,0:15:39.58:0,40,455	0/0:22,0:23:33.81:0,34,553	0/0:12,0:12:23.67:0,24,224	0/0:26,0:26:66.15:0,66,748	1/1:0,22:22:60.20:985,60,0	1/1:2,25:28:63.22:1034,63,0	0/0:34,0:34:81.15:0,81,909	1/1:0,24:25:60:982,60,0	0/0:23,0:23:54.13:0,54,619	0/0:22,0:22:60.18:0,60,698	0/0:23,0:23:60.16:0,60,689	0/0:27,0:27:72.21:0,72,839	0/0:26,0:26:75.20:0,75,862	0/0:26,0:26:66.18:0,66,758	1/1:4,25:30:72.25:1182,72,0	1/1:0,20:20:60.20:985,60,0	0/0:19,0:19:51.14:0,51,594	1/1:7,15:23:50.63:740,51,0	1/1:2,14:16:36.08:560,36,0	0/0:28,0:28:81.21:0,81,923	0/0:14,0:14:42.11:0,42,479	0/0:20,0:20:48.13:0,48,559	0/0:28,0:28:72.20:0,72,838	1/1:3,12:15:36.12:591,36,0	0/0:31,0:31:75.20:0,75,864	0/0:27,0:27:78.18:0,78,875	0/0:4,0:4:12.04:0,12,140
chr10	7208121	.	T	TAA	4710.76	PASS	AB=0.900;AC=19;AF=0.339;AN=56;BaseQRankSum=-4.250;DP=427;FS=29.973;HRun=8;HaplotypeScore=61.7619;InbreedingCoeff=0.9023;MQ=73.72;MQ0=0;MQRankSum=-6.516;QD=34.64;ReadPosRankSum=1.941;VQSLOD=3.2807;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,12:16:39.09:583,39,0	0/0:9,0:9:27.07:0,27,301	0/0:9,0:9:11.53:0,12,158	0/1:8,1:9:18.05:18,0,161	0/0:22,0:22:60.16:0,60,667	1/1:1,20:21:60.20:950,60,0	1/1:2,11:13:30.10:476,30,0	0/0:31,0:31:81.13:0,81,858	1/1:2,7:9:18.06:282,18,0	0/0:22,0:22:57.14:0,57,629	0/0:14,0:14:36.10:0,36,401	0/0:16,0:16:39.06:0,39,422	0/0:16,0:16:45.05:0,45,475	0/0:14,0:14:27.05:0,27,301	0/0:16,0:16:42.10:0,42,467	1/1:1,11:12:33.11:523,33,0	1/1:0,11:11:24.08:381,24,0	0/0:12,0:12:21.04:0,21,234	1/1:2,4:7:15.04:213,15,0	1/1:0,18:19:42.14:666,42,0	0/0:23,0:22:57.13:0,57,625	0/0:9,0:9:24.06:0,24,267	0/0:12,0:12:33.09:0,33,366	0/0:19,0:19:51.12:0,51,568	1/1:4,14:18:39.13:619,39,0	0/0:26,0:26:75.20:0,75,836	0/0:14,0:14:42.11:0,42,468	0/0:7,0:7:9.01:0,9,100
chr10	7208396	.	TTCTCTC	T	2747.44	PASS	AB=1.000;AC=33;AF=0.786;AN=42;BaseQRankSum=2.463;DP=564;FS=4.447;HRun=0;HaplotypeScore=135.9295;InbreedingCoeff=0.3796;MQ=70.63;MQ0=13;MQRankSum=0.508;QD=7.53;ReadPosRankSum=-0.195;VQSLOD=2.3000;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:22:3.01:43,3,0	1/1:9,0:8:12.04:232,12,0	./.	./.	0/0:19,0:19:2.98:0,3,21	1/1:17,2:19:9.03:166,9,0	1/1:17,1:20:3.01:60,3,0	./.	1/1:12,2:14:9.02:139,9,0	1/1:19,0:27:27.01:452,27,0	./.	1/1:19,0:18:3.01:60,3,0	0/1:22,0:22:6.83:7,0,12	0/0:21,0:21:5.99:0,6,48	1/1:19,3:24:15.01:209,15,0	1/1:16,5:21:15.05:282,15,0	1/1:19,1:21:18.06:255,18,0	1/1:15,1:16:24.01:368,24,0	./.	1/1:11,0:12:3.01:50,3,0	1/1:30,15:45:3.01:39,3,0	0/0:21,0:21:0:0,0,0	0/0:10,0:16:0:0,0,0	1/1:29,0:29:23.79:206,24,0	./.	1/1:24,0:25:17.97:238,18,0	1/1:17,0:17:3.01:51,3,0	./.
chr10	7208440	.	CTCTCTCTG	C	4137.96	PASS	AB=0.937;AC=35;AF=0.673;AN=52;BaseQRankSum=5.450;DP=527;FS=28.095;HRun=0;HaplotypeScore=166.2325;InbreedingCoeff=0.0876;MQ=49.02;MQ0=25;MQRankSum=1.599;QD=9.15;ReadPosRankSum=1.923;VQSLOD=1.2561;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:25:5.40:57,5,0	0/1:7,0:6:29.90:214,0,30	1/1:6,0:1:1.82:5,2,0	./.	0/0:24,0:21:14.20:0,14,267	1/1:20,0:19:8.71:166,9,0	0/1:24,0:24:20.98:62,0,21	0/1:18,0:17:30.50:30,0,123	1/1:19,0:19:17.21:164,17,0	0/1:22,0:22:73.27:461,0,73	0/0:9,0:8:11.97:0,12,95	1/1:20,0:19:24.06:318,24,0	0/1:28,0:27:3.83:4,0,33	0/0:18,0:18:5.99:0,6,48	0/1:15,6:21:99:196,0,147	1/1:21,0:19:16.61:304,17,0	1/1:17,0:16:21.79:284,22,0	0/1:26,0:24:99:320,0,162	1/1:8,0:5:5.68:28,6,0	1/1:9,0:7:3.01:50,3,0	0/1:49,0:48:58.23:58,0,258	0/0:3,17:20:3.48:0,3,47	1/1:22,0:21:8.41:173,8,0	1/1:37,0:35:73.17:625,73,0	./.	1/1:32,0:31:62.32:502,62,0	0/1:8,0:16:16.32:86,0,16	1/1:4,0:3:5.74:31,6,0
chr10	7208442	.	CTCTCTG	C	3419.74	PASS	AB=0.941;AC=36;AF=0.692;AN=52;BaseQRankSum=5.819;DP=527;FS=26.352;HRun=0;HaplotypeScore=155.0703;InbreedingCoeff=0.0680;MQ=48.98;MQ0=29;MQRankSum=0.283;QD=7.57;ReadPosRankSum=1.614;VQSLOD=1.2139;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:23:2.48:14,2,0	0/1:7,0:6:29.90:124,0,30	1/1:7,0:1:1.82:5,2,0	./.	0/0:24,0:21:11.67:0,12,224	1/1:19,0:18:8.70:97,9,0	0/1:24,0:24:21.16:37,0,21	0/1:19,0:18:27.49:27,0,148	1/1:19,0:19:14.68:119,15,0	0/1:23,0:23:97.06:292,0,97	0/0:9,0:8:11.97:0,12,95	1/1:21,0:20:44.57:359,45,0	0/1:3,24:26:18.03:26,0,18	0/0:1,16:17:0:0,0,0	0/1:22,0:22:91.22:91,0,169	1/1:21,0:19:18.42:232,18,0	1/1:16,0:15:21.56:159,22,0	0/1:25,0:22:99:192,0,167	1/1:9,0:5:5.68:28,6,0	1/1:9,0:7:3.01:30,3,0	0/1:50,0:49:37.22:37,0,280	0/0:19,1:20:2.99:0,3,26	1/1:20,0:19:11.63:195,12,0	1/1:38,0:36:78.18:768,78,0	./.	1/1:6,0:31:62.13:477,62,0	1/1:16,0:15:8.76:77,9,0	1/1:4,0:3:5.74:31,6,0
chr10	7208453	.	TGTGTGTGTGTGTGTGTGTGG	T	3112.09	PASS	AB=1.000;AC=13;AF=0.241;AN=54;BaseQRankSum=6.463;DP=600;FS=4.258;HRun=0;HaplotypeScore=237.3222;InbreedingCoeff=0.7864;MQ=50.04;MQ0=31;MQRankSum=-6.845;QD=21.03;ReadPosRankSum=3.016;VQSLOD=1.7278;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:30:2.75:70,3,0	0/0:10,0:9:27.01:0,27,1724	0/0:17,0:6:18.05:0,18,997	0/0:11,0:4:12.04:0,12,826	0/0:20,0:17:39.13:0,39,3219	0/0:8,15:22:0.47:0,0,1	1/1:6,27:32:5.04:386,5,0	0/0:24,0:22:60.20:0,60,3478	1/1:4,20:24:14.91:712,15,0	0/0:27,0:26:71.87:0,72,4049	0/0:10,0:9:15.05:0,15,1333	0/0:22,0:21:51.60:0,52,3361	0/0:26,0:25:6.02:0,6,327	0/0:20,0:20:9.03:0,9,678	0/0:23,0:23:45.15:0,45,3034	1/1:7,16:21:24.08:1169,24,0	1/1:5,12:16:12.03:580,12,0	0/0:25,0:22:60.21:0,60,4277	1/1:6,3:6:8.95:356,9,0	0/1:12,0:10:0:0,0,0	0/0:56,0:56:88.24:0,88,6954	0/0:21,0:21:7.43:0,7,509	0/0:21,0:20:36.12:0,36,2598	0/0:39,0:37:83.31:0,83,5035	./.	0/0:32,0:30:75.75:0,76,2855	0/0:16,0:14:12.04:0,12,330	0/0:3,0:3:9.03:0,9,320
chr10	7208455	.	TGTGTGTGTGTGTGTGTGG	T	2708.37	PASS	AB=0.667;AC=13;AF=0.241;AN=54;BaseQRankSum=7.510;DP=598;FS=4.287;HRun=0;HaplotypeScore=226.5830;InbreedingCoeff=0.7961;MQ=50.32;MQ0=30;MQRankSum=-6.738;QD=18.81;ReadPosRankSum=2.814;VQSLOD=1.9603;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:30:2.88:88,3,0	0/0:8,0:8:24.08:0,24,1535	0/0:17,0:6:17.95:0,18,904	0/0:13,0:5:15.05:0,15,805	0/0:20,0:17:39.13:0,39,2882	0/0:22,0:21:0.47:0,0,1	1/1:33,0:32:5.94:332,6,0	0/0:24,0:22:63.02:0,63,3221	1/1:24,0:24:14.91:619,15,0	0/0:27,0:26:68.90:0,69,3471	0/0:10,0:9:15.05:0,15,1211	0/0:23,0:22:54.61:0,55,3104	0/0:26,0:25:5.99:0,6,287	0/0:20,0:20:9.03:0,9,605	0/0:23,0:23:45.13:0,45,2731	1/1:23,0:21:24.08:1019,24,0	1/1:16,0:15:12.04:497,12,0	0/0:24,0:21:60.21:0,60,3785	1/1:8,0:5:9:315,9,0	0/1:5,5:8:0:0,0,0	0/0:56,0:56:90.78:0,91,6467	0/0:21,0:21:7.43:0,7,459	0/0:21,0:20:36.12:0,36,2312	0/0:40,0:38:85.13:0,85,4532	./.	0/0:33,0:31:77.17:0,77,2480	0/0:17,0:15:15.05:0,15,398	0/0:3,0:3:9.03:0,9,254
chr10	7208459	.	TGTGTGTGTGTGTGG	T	1980.03	PASS	AB=1.000;AC=14;AF=0.259;AN=54;BaseQRankSum=7.977;DP=577;FS=7.165;HRun=0;HaplotypeScore=198.1435;InbreedingCoeff=0.8077;MQ=52.58;MQ0=27;MQRankSum=-6.826;QD=13.94;ReadPosRankSum=2.366;VQSLOD=1.7326;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:8,25:33:3.48:125,3,0	0/0:8,0:8:23.82:0,24,1178	0/0:22,0:11:22.54:0,23,860	0/0:14,0:6:18.06:0,18,657	0/0:19,0:16:36.12:0,36,2243	0/1:15,0:15:0:0,0,0	1/1:29,0:28:7.34:228,7,0	0/0:25,0:23:57.15:0,57,2449	1/1:20,0:20:15.04:449,15,0	0/0:26,0:25:62.89:0,63,2502	0/0:9,0:8:18.06:0,18,999	0/0:22,0:22:54.61:0,55,2256	0/0:26,0:25:5.95:0,6,210	0/0:22,0:22:14.63:0,15,578	0/0:24,0:24:43.81:0,44,2060	1/1:17,0:16:24.08:748,24,0	1/1:14,0:13:12.04:358,12,0	0/0:23,0:20:59.89:0,60,2823	1/1:6,0:3:9:237,9,0	0/1:8,0:6:0:0,0,0	0/0:55,0:55:99:0,101,5218	0/0:22,0:22:9.50:0,10,409	0/0:21,0:20:36.12:0,36,1745	0/0:37,0:35:81.64:0,82,3198	./.	0/0:35,0:33:80.43:0,80,1513	0/0:16,0:14:7.64:0,8,205	0/0:3,0:3:8.95:0,9,124
chr10	7208925	.	TG	T	1267.62	PASS	AB=0.993;AC=29;AF=0.725;AN=40;BaseQRankSum=1.690;DP=249;FS=0.724;HRun=1;HaplotypeScore=62.6458;InbreedingCoeff=-0.0451;MQ=43.66;MQ0=8;MQRankSum=-1.335;QD=5.51;ReadPosRankSum=0.753;VQSLOD=0.3545;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/1:8,0:8:45.55:46,0,60	0/1:15,1:6:5.36:5,0,32	0/0:16,1:5:5.68:0,6,28	0/1:27,0:26:75.27:94,0,75	./.	./.	0/1:15,0:13:24.28:62,0,24	./.	0/1:13,0:9:28.47:83,0,28	0/1:18,0:16:19.39:19,0,119	1/1:4,0:4:8.92:67,9,0	1/1:10,1:10:17.87:87,18,0	1/1:13,0:13:25.12:151,25,0	0/1:7,0:7:9.58:10,0,68	./.	1/1:2,0:1:0.89:2,1,0	0/1:17,0:17:37.98:61,0,38	./.	./.	0/1:4,0:3:0:0,0,0	1/1:4,0:4:5.56:17,6,0	1/1:7,1:8:19.76:124,20,0	1/1:8,0:8:16.03:94,16,0	./.	1/1:22,0:20:46.96:257,47,0	1/1:15,0:12:15.97:98,16,0	1/1:17,1:14:22.38:119,22,0
chr10	7209024	.	AC	A	1282.84	PASS	AB=0.958;AC=19;AF=0.500;AN=38;BaseQRankSum=-0.773;DP=312;FS=5.441;HRun=8;HaplotypeScore=69.6344;InbreedingCoeff=0.5970;MQ=80.35;MQ0=36;MQRankSum=-0.346;QD=8.07;ReadPosRankSum=1.905;VQSLOD=1.1791;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	1/1:6,0:6:17.65:112,18,0	0/0:57,0:19:15.92:0,16,225	0/0:47,0:16:4.10:0,4,78	1/1:19,1:18:38.13:259,38,0	./.	./.	0/1:22,0:17:23.98:105,0,24	./.	1/1:14,0:13:32.57:230,33,0	1/1:16,0:16:32.64:224,33,0	0/0:8,0:8:17.87:0,18,129	0/0:11,0:10:28.78:0,29,264	0/0:6,0:5:14.96:0,15,143	1/1:12,0:11:14.91:108,15,0	./.	./.	1/1:17,0:16:23.30:155,23,0	./.	./.	1/1:8,0:7:2.91:22,3,0	0/0:7,0:7:12:0,12,124	0/0:5,0:4:11.94:0,12,100	0/0:5,0:5:12.01:0,12,124	./.	0/1:11,1:11:11.18:47,0,11	0/1:18,1:17:8.75:67,0,9	1/1:8,3:11:9.67:113,10,0
chr10	7209031	.	CCT	C	1986.41	PASS	AB=0.949;AC=21;AF=0.375;AN=56;BaseQRankSum=-5.588;DP=334;FS=0.000;HRun=0;HaplotypeScore=52.2331;InbreedingCoeff=0.2503;MQ=78.55;MQ0=28;MQRankSum=0.419;QD=11.82;ReadPosRankSum=0.622;VQSLOD=2.9299;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:3:5.95:0,6,44	1/1:0,6:6:17.92:200,18,0	0/0:61,0:20:37.73:0,38,434	0/0:39,0:16:10.26:0,10,164	1/1:2,16:18:35.66:325,36,0	0/0:2,0:1:2.92:0,3,17	0/0:2,0:2:2.94:0,3,18	0/1:14,9:17:68.40:190,0,68	0/0:3,0:2:2.90:0,3,16	1/1:1,13:14:38.77:422,39,0	1/1:0,14:15:32.96:405,33,0	0/1:10,0:10:34.66:35,0,104	0/0:13,0:12:7.31:0,7,200	0/1:8,0:8:8.40:8,0,101	1/1:0,9:9:15.05:218,15,0	0/0:1,0:1:0:0,0,0	0/0:1,0:1:2.96:0,3,19	1/1:4,14:17:0.42:265,0,0	0/0:4,0:2:5.93:0,6,41	0/0:6,0:5:8.87:0,9,58	1/1:1,9:10:2.94:43,3,0	0/1:10,0:10:11:11,0,79	0/1:5,0:5:3.29:3,0,79	0/1:5,0:5:5.47:5,0,75	0/0:1,0:1:2.94:0,3,18	0/0:11,0:11:26.17:0,26,168	0/0:18,0:18:3.44:0,3,207	0/1:10,1:12:23.19:23,0,64
chr10	7209073	.	ATTTACTCTCCATTAG	A	4378.08	PASS	AC=18;AF=0.333;AN=54;BaseQRankSum=9.256;DP=381;FS=0.000;HRun=0;HaplotypeScore=136.7214;InbreedingCoeff=0.8463;MQ=49.74;MQ0=26;MQRankSum=-8.979;QD=37.42;ReadPosRankSum=1.233;VQSLOD=4.0811;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,5:9:15.05:584,15,0	0/0:4,0:4:9.03:0,9,650	0/0:21,0:4:3.01:0,3,113	0/0:15,0:4:12.04:0,12,264	0/0:20,0:19:51.18:0,51,3593	1/1:5,8:11:15.05:473,15,0	1/1:3,3:5:3.01:95,3,0	0/0:15,0:10:21.07:0,21,1045	1/1:7,6:13:9.03:380,9,0	0/0:19,0:18:48.16:0,48,3197	0/0:21,0:21:48.16:0,48,3229	0/0:12,0:12:36.12:0,36,2601	0/0:13,0:13:33.11:0,33,2196	0/0:7,0:6:18.06:0,18,1164	0/0:17,0:17:51.18:0,51,3534	1/1:0,4:4:3.01:127,3,0	1/1:7,7:14:6.02:254,6,0	0/0:18,0:17:39.13:0,39,2605	1/1:15,3:12:6.02:254,6,0	1/1:8,10:18:27.05:937,27,0	0/0:13,0:13:27.09:0,27,1856	0/0:12,0:12:24.08:0,24,1445	0/0:6,0:6:15.05:0,15,979	0/0:9,0:9:24.08:0,24,1469	1/1:8,13:21:36.12:1276,36,0	0/0:18,0:17:42.14:0,42,2879	0/0:18,0:18:45.15:0,45,3147	./.
chr10	7211943	.	TA	T	4080.85	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=7.814;DP=605;FS=0.725;HRun=10;HaplotypeScore=70.0163;InbreedingCoeff=0.9942;MQ=67.51;MQ0=9;MQRankSum=2.647;QD=20.61;ReadPosRankSum=2.797;VQSLOD=4.6432;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,25:28:70.80:604,71,0	0/0:6,0:6:18.03:0,18,190	0/0:20,1:17:21.19:0,21,314	0/0:14,0:7:14.79:0,15,147	0/0:25,2:27:40.12:0,40,671	1/1:3,21:25:53.02:449,53,0	1/1:1,18:19:50.99:443,51,0	0/0:32,0:28:60.12:0,60,638	1/1:2,17:19:50.99:443,51,0	0/0:35,0:35:84.06:0,84,910	0/0:29,2:31:25.95:0,26,717	0/0:18,2:20:19.91:0,20,414	0/0:21,0:21:54.13:0,54,588	0/0:15,0:15:30.04:0,30,307	0/0:22,0:22:31.13:0,31,571	1/1:1,18:19:53.99:469,54,0	1/1:2,18:20:50.99:443,51,0	0/0:24,0:24:66.17:0,66,723	1/1:5,12:16:35.99:313,36,0	1/1:3,19:22:44.84:372,45,0	0/0:15,0:15:36.08:0,36,388	0/0:12,0:12:33.08:0,33,356	0/0:22,0:22:54.13:0,54,588	0/0:22,0:21:63.17:0,63,694	1/1:4,24:28:62.98:547,63,0	0/0:25,0:25:57.12:0,57,607	0/0:25,0:25:69.13:0,69,730	0/0:17,0:16:39.07:0,39,411
chr10	7213021	.	GT	G	4987.33	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=11.066;DP=351;FS=14.335;HRun=1;HaplotypeScore=64.4809;InbreedingCoeff=0.8628;MQ=66.22;MQ0=1;MQRankSum=-7.749;QD=27.55;ReadPosRankSum=-1.829;VQSLOD=3.0773;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,24:24:57.19:790,57,0	1/1:0,5:5:6.02:84,6,0	0/0:28,0:20:47.31:0,47,702	0/0:30,0:18:0.73:0,1,323	1/1:0,10:10:21.03:268,21,0	1/1:0,7:7:18.06:251,18,0	1/1:0,10:11:24.08:328,24,0	1/1:2,5:7:14.96:143,15,0	1/1:5,8:13:38.98:483,39,0	1/1:2,0:2:5.93:40,6,0	1/1:2,1:3:9:93,9,0	0/0:14,0:14:36.51:0,37,588	0/0:19,0:19:57.18:0,57,833	0/0:18,0:18:54.18:0,54,824	1/1:0,14:14:15.05:209,15,0	1/1:1,8:9:18.03:229,18,0	1/1:1,13:14:33.01:414,33,0	1/1:1,5:6:18.06:248,18,0	1/1:2,7:6:15:167,15,0	1/1:0,6:6:9.03:123,9,0	1/1:0,17:17:28.60:357,29,0	0/0:22,0:22:63.21:0,63,946	0/0:22,0:22:62.26:0,62,920	0/0:16,0:15:43.29:0,43,595	1/1:1,4:5:12.03:150,12,0	1/1:0,5:5:9.02:108,9,0	1/1:0,12:12:30.10:419,30,0	1/1:0,2:2:6.02:84,6,0
chr10	7213031	.	AG	A	1483.42	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=8.056;DP=375;FS=10.430;HRun=3;HaplotypeScore=91.0361;InbreedingCoeff=0.8324;MQ=65.28;MQ0=1;MQRankSum=-3.751;QD=13.74;ReadPosRankSum=-0.204;VQSLOD=1.7517;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:23:61.33:410,61,0	0/0:6,0:6:8.04:0,8,77	0/0:35,0:25:58.39:0,58,786	0/0:34,0:21:24.30:0,24,373	0/0:9,0:9:7.15:0,7,146	1/1:8,0:8:23.39:165,23,0	1/1:12,0:12:10.04:140,10,0	0/0:7,0:8:17.88:0,18,165	1/1:9,5:14:38.16:322,38,0	0/0:3,0:3:7.54:0,8,53	0/1:2,0:2:6.35:6,0,27	0/0:17,0:17:45.06:0,45,674	0/0:15,0:15:45.15:0,45,671	0/0:17,0:17:51.16:0,51,743	0/0:12,0:12:7.35:0,7,146	1/1:8,1:9:20.12:178,20,0	1/1:13,2:14:20.24:201,20,0	0/0:7,0:7:17:0,17,135	1/1:6,0:5:8.96:69,9,0	1/1:6,0:6:6.01:59,6,0	0/0:15,0:15:29.16:0,29,276	0/0:20,0:20:57.19:0,57,852	0/0:20,0:20:50.42:0,50,763	0/0:20,0:19:45.15:0,45,660	1/1:12,1:13:17.31:138,17,0	0/0:10,0:10:18.43:0,18,184	0/0:15,0:15:17.72:0,18,221	0/0:3,0:3:6.42:0,6,51
chr10	7213083	.	TTGAGAGAGAGAGAG	T	4373.17	PASS	AB=0.859;AC=33;AF=0.589;AN=56;BaseQRankSum=2.064;DP=389;FS=6.887;HRun=0;HaplotypeScore=169.3613;InbreedingCoeff=0.3073;MQ=65.66;MQ0=12;MQRankSum=-0.599;QD=16.82;ReadPosRankSum=-3.499;VQSLOD=2.6356;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:20:29.83:314,30,0	1/1:2,2:4:8.98:277,9,0	0/0:32,0:17:22.04:0,22,366	0/1:44,0:17:17.44:17,0,124	1/1:7,3:10:17.81:252,18,0	0/1:11,0:13:37.93:38,0,560	0/1:10,0:11:99:108,0,374	1/1:2,11:13:38.89:352,39,0	0/1:11,0:12:41.07:41,0,286	1/1:1,7:7:11.91:192,12,0	1/1:7,0:7:14.94:221,15,0	0/0:18,0:18:24.06:0,24,655	0/0:19,0:19:44.57:0,45,787	0/0:13,0:13:39.02:0,39,474	1/1:7,2:11:24.03:506,24,0	0/1:7,0:10:28.60:29,0,275	0/1:7,0:10:63.84:64,0,453	1/1:7,3:10:7.88:424,8,0	0/1:8,0:10:79.74:80,0,472	0/1:7,0:10:20.88:21,0,500	1/1:11,1:12:11.94:92,12,0	0/0:14,0:14:25.75:0,26,381	0/0:13,0:13:36.01:0,36,543	0/0:20,0:19:30.46:0,30,429	0/1:10,0:11:33.95:34,0,290	1/1:12,0:12:35.94:309,36,0	1/1:10,0:16:44.96:891,45,0	1/1:5,0:5:14.90:111,15,0
chr10	7213084	.	TGAGAGAGA	T	1938.24	PASS	AB=1.000;AC=30;AF=0.625;AN=48;BaseQRankSum=1.957;DP=388;FS=33.415;HRun=0;HaplotypeScore=141.2560;InbreedingCoeff=0.5567;MQ=65.75;MQ0=12;MQRankSum=-4.502;QD=8.85;ReadPosRankSum=1.204;VQSLOD=1.2931;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:20:3.01:56,3,0	1/1:4,0:4:6.02:108,6,0	./.	./.	1/1:10,0:10:2.75:53,3,0	0/0:13,0:13:18.02:0,18,192	0/0:11,0:11:11.69:0,12,115	0/1:13,0:13:0:0,0,0	0/0:12,0:12:2.47:0,2,81	1/1:8,0:7:3.01:56,3,0	1/1:8,0:8:2.49:6,2,0	1/1:14,4:18:8.97:145,9,0	1/1:11,7:19:18.06:430,18,0	1/1:11,2:13:6.02:146,6,0	1/1:11,0:11:9.03:155,9,0	0/1:10,0:10:2.39:2,0,49	0/0:10,0:10:17.84:0,18,193	0/1:10,0:10:7.16:103,0,7	0/0:10,0:10:18.04:0,18,219	0/0:12,0:11:17.97:0,18,187	0/1:12,0:12:0:0,0,0	1/1:10,2:14:12.04:250,12,0	1/1:10,3:13:6.02:150,6,0	1/1:11,9:19:5.69:102,6,0	0/0:11,0:11:9.03:0,9,125	./.	1/1:16,0:16:18.06:334,18,0	./.
chr10	7213368	.	T	TTG	20369.94	PASS	AB=0.938;AC=41;AF=0.732;AN=56;BaseQRankSum=13.040;DP=615;FS=0.324;HRun=0;HaplotypeScore=186.9340;InbreedingCoeff=0.9228;MQ=63.33;MQ0=0;MQRankSum=-14.498;QD=47.37;ReadPosRankSum=-2.507;VQSLOD=3.8091;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,24:30:75.23:1201,75,0	1/1:0,6:6:18.06:343,18,0	0/0:17,0:18:35.73:0,36,592	0/1:14,0:14:6.93:7,0,156	1/1:2,13:15:30.10:542,30,0	1/1:6,24:30:81.23:1436,81,0	1/1:2,26:29:81.28:1457,81,0	1/1:5,32:37:99:2032,108,0	1/1:1,29:30:87.13:1574,87,0	1/1:5,18:23:60.19:1123,60,0	1/1:1,11:13:30.10:515,30,0	0/0:38,0:38:99:0,111,1636	0/0:23,0:23:69.23:0,69,1056	0/0:27,0:27:78.25:0,78,1147	1/1:4,22:26:72.24:1333,72,0	1/1:2,21:23:60.21:1148,60,0	1/1:3,18:21:45.15:858,45,0	1/1:3,12:15:45.15:845,45,0	1/1:4,12:16:45.15:833,45,0	1/1:3,14:16:42.11:706,42,0	1/1:1,20:21:60.20:1061,60,0	0/0:24,0:24:69.15:0,69,1002	0/0:15,0:15:45.11:0,45,663	0/0:40,0:40:99:0,120,1838	1/1:1,11:12:30.10:527,30,0	1/1:4,20:24:69.19:1287,69,0	1/1:0,19:19:57.19:1078,57,0	1/1:0,8:8:24.08:463,24,0
chr10	7213390	.	TCACG	T	17875.52	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=17.756;DP=574;FS=0.334;HRun=0;HaplotypeScore=201.6191;InbreedingCoeff=0.9833;MQ=64.85;MQ0=0;MQRankSum=-18.152;QD=47.54;ReadPosRankSum=-0.415;VQSLOD=5.1074;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,25:30:63.22:1217,63,0	1/1:0,6:6:12.04:232,12,0	0/0:11,0:11:33.10:0,33,717	0/0:13,0:13:36.05:0,36,775	1/1:2,13:15:36.01:654,36,0	1/1:0,22:22:66.23:1275,66,0	1/1:5,31:36:87.21:1607,87,0	1/1:4,24:28:72.25:1394,72,0	1/1:2,18:20:60.19:1125,60,0	1/1:2,26:28:72.21:1394,72,0	1/1:1,6:7:18.06:347,18,0	0/0:31,0:31:90.28:0,90,2227	0/0:28,0:28:81.28:0,81,2183	0/0:29,0:29:81.28:0,81,2215	1/1:1,26:28:78.27:1483,78,0	1/1:3,16:19:51.16:951,51,0	1/1:1,19:20:42.14:811,42,0	1/1:1,13:14:36.12:697,36,0	1/1:1,12:13:36.12:697,36,0	1/1:0,12:12:33.11:634,33,0	1/1:2,15:17:24.01:399,24,0	0/0:30,0:30:87.30:0,87,2309	0/0:12,0:12:36.12:0,36,984	0/0:44,0:44:99:0,129,3434	1/1:0,15:15:36.12:696,36,0	1/1:2,23:24:63.22:1219,63,0	1/1:1,17:18:45.15:870,45,0	1/1:0,3:3:9.03:174,9,0
chr10	7213650	.	A	ACGCG	3202.07	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-4.834;DP=913;FS=5.738;HRun=0;HaplotypeScore=166.2032;InbreedingCoeff=0.9696;MQ=68.98;MQ0=1;MQRankSum=-1.308;QD=47.79;ReadPosRankSum=1.906;VQSLOD=4.3909;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,59:67:99:3297,126,0	0/0:13,0:13:33.08:0,33,577	0/0:21,0:21:57.08:0,57,923	0/0:28,0:28:68.75:0,69,1086	0/0:27,0:27:59.80:0,60,1066	0/0:28,0:28:60.21:0,60,1095	0/0:42,0:42:99:0,105,1762	0/0:37,0:37:99:0,102,1797	0/0:32,0:31:72.25:0,72,1324	0/0:49,0:49:99:0,135,2297	0/0:16,0:16:39.12:0,39,687	0/0:44,0:44:99:0,120,2136	0/0:28,0:28:69.24:0,69,1247	0/0:48,0:48:99:0,129,2311	0/0:44,0:44:99:0,105,1855	0/0:36,0:36:96.28:0,96,1666	0/0:30,0:30:63.22:0,63,1138	0/0:31,0:31:75.14:0,75,1244	0/0:14,0:14:30.09:0,30,479	0/0:31,0:31:78.25:0,78,1376	0/0:85,0:85:99:0,169,2930	0/0:23,0:23:63.20:0,63,1109	0/0:24,0:24:69.24:0,69,1232	0/0:35,0:35:84.27:0,84,1483	0/0:25,0:25:66.20:0,66,1147	0/0:27,0:27:72.20:0,72,1236	0/0:24,0:24:60.19:0,60,1065	0/0:4,0:4:12.04:0,12,221
chr10	7213738	.	TAA	T	20455.38	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=6.055;DP=716;FS=3.907;HRun=2;HaplotypeScore=195.2861;InbreedingCoeff=0.9989;MQ=82.35;MQ0=1;MQRankSum=-8.254;QD=41.66;ReadPosRankSum=0.430;VQSLOD=4.5310;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,26:32:81.23:1231,81,0	1/1:0,16:16:38.90:634,39,0	0/0:27,0:27:81.23:0,81,1500	0/0:24,0:24:72.19:0,72,1330	1/1:0,26:26:72.07:1102,72,0	1/1:0,20:20:54.10:845,54,0	1/1:0,28:28:72.25:1157,72,0	1/1:0,30:30:90.21:1382,90,0	1/1:0,29:28:81.28:1314,81,0	1/1:0,39:39:99:1770,111,0	1/1:0,19:19:39.13:632,39,0	0/0:41,0:41:99:0,123,2382	0/0:22,0:22:66.07:0,66,1241	0/0:33,0:33:99:0,99,1863	1/1:0,43:43:99:1940,126,0	1/1:1,26:27:72.25:1170,72,0	1/1:0,26:26:60.15:946,60,0	1/1:0,9:9:24:359,24,0	1/1:0,18:18:54.11:801,54,0	1/1:0,23:22:60.20:974,60,0	1/1:0,40:40:75.19:1189,75,0	0/0:25,0:25:72.20:0,72,1369	0/0:18,0:18:51.14:0,51,977	0/0:35,0:35:96.32:0,96,1911	1/1:0,15:15:45.09:699,45,0	1/1:0,19:19:57.15:898,57,0	1/1:0,25:25:72.07:1102,72,0	1/1:0,7:7:21:309,21,0
chr10	7213785	.	A	ACTGTG	20633.94	PASS	AB=0.885;AC=54;AF=0.964;AN=56;BaseQRankSum=1.187;DP=626;FS=0.784;HRun=0;HaplotypeScore=289.8096;InbreedingCoeff=-0.0374;MQ=70.89;MQ0=0;MQRankSum=-8.494;QD=32.96;ReadPosRankSum=3.724;VQSLOD=3.9816;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:23:57.07:531,57,0	1/1:11,0:11:30.06:407,30,0	0/1:17,1:20:99:119,0,487	0/1:16,1:18:99:127,0,331	1/1:31,0:31:77.22:872,77,0	1/1:25,0:25:72.12:926,72,0	1/1:22,0:22:56.98:558,57,0	1/1:33,0:33:93.30:1463,93,0	1/1:25,0:25:74.98:690,75,0	1/1:29,0:29:81.63:988,82,0	1/1:19,0:19:44.78:401,45,0	1/1:27,0:27:78.21:1396,78,0	1/1:20,0:20:57.10:898,57,0	1/1:34,0:34:99:1531,102,0	1/1:33,0:33:95.96:837,96,0	1/1:30,0:30:84.08:1024,84,0	1/1:17,0:16:45.04:551,45,0	1/1:9,0:9:18.05:253,18,0	1/1:15,0:15:45.15:749,45,0	1/1:24,0:23:65.01:718,65,0	1/1:20,0:19:45.02:461,45,0	1/1:16,0:16:47.73:710,48,0	1/1:16,0:16:45.02:721,45,0	1/1:33,0:33:50.48:897,50,0	1/1:17,0:17:51.07:612,51,0	1/1:21,0:21:63.20:766,63,0	1/1:29,0:29:87.04:1116,87,0	1/1:9,0:9:27.07:311,27,0
chr10	7214755	.	CT	C	17898.37	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=8.696;DP=744;FS=0.000;HRun=3;HaplotypeScore=89.2848;InbreedingCoeff=0.9999;MQ=80.67;MQ0=0;MQRankSum=-5.515;QD=34.22;ReadPosRankSum=1.840;VQSLOD=5.1737;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,38:38:99:1302,105,0	1/1:0,11:11:33.10:409,33,0	0/0:17,0:17:51.17:0,51,711	0/0:19,0:19:54.08:0,54,667	1/1:0,19:19:51.16:632,51,0	1/1:0,21:21:63.20:781,63,0	1/1:2,27:29:75.24:930,75,0	1/1:1,27:28:81.24:992,81,0	1/1:0,25:25:69.22:855,69,0	1/1:1,33:34:99:1214,99,0	1/1:0,27:27:71.90:892,72,0	0/0:32,0:32:87.29:0,87,1251	0/0:35,0:35:93.31:0,93,1331	0/0:27,0:27:78.23:0,78,1077	1/1:0,32:32:96.30:1190,96,0	1/1:0,19:19:54.17:669,54,0	1/1:0,40:40:99:1376,111,0	1/1:0,32:32:90.28:1116,90,0	1/1:1,17:18:45.14:556,45,0	1/1:1,20:21:54.17:669,54,0	1/1:4,50:54:99:1785,144,0	0/0:27,0:27:75.25:0,75,1078	0/0:26,0:26:72.24:0,72,1037	0/0:38,0:38:99:0,108,1555	1/1:0,17:17:48.15:595,48,0	1/1:0,27:27:78.25:967,78,0	1/1:1,16:17:45.14:558,45,0	1/1:0,14:14:33.10:409,33,0
chr10	7215578	.	C	CG	15293.71	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-10.456;DP=553;FS=1.712;HRun=3;HaplotypeScore=58.4292;InbreedingCoeff=0.9630;MQ=76.87;MQ0=0;MQRankSum=-3.878;QD=36.76;ReadPosRankSum=2.090;VQSLOD=5.4373;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,42:45:99:1676,120,0	1/1:0,7:7:21.07:293,21,0	0/0:18,0:19:50.88:0,51,572	0/0:15,0:15:39.09:0,39,432	1/1:1,2:3:6.02:84,6,0	1/1:0,25:25:72.20:984,72,0	1/1:0,29:29:81.27:1133,81,0	1/1:2,20:22:60.14:797,60,0	1/1:0,26:26:72.24:1006,72,0	1/1:1,25:26:75.21:1011,75,0	1/1:0,10:10:30.10:419,30,0	0/0:16,0:16:48.15:0,48,574	0/0:19,0:19:54.16:0,54,646	0/0:23,0:23:66.20:0,66,790	1/1:1,32:33:87.29:1216,87,0	1/1:1,18:19:48.16:671,48,0	1/1:2,37:39:90.27:1239,90,0	1/1:2,26:28:72.24:1007,72,0	1/1:2,16:18:51.17:711,51,0	1/1:0,13:13:33.11:462,33,0	1/1:2,24:26:66.22:923,66,0	0/0:7,0:7:21.06:0,21,252	0/0:7,0:7:21.06:0,21,251	0/0:31,0:31:81.25:0,81,970	1/1:1,9:10:24.08:336,24,0	1/1:1,21:22:60.16:800,60,0	1/1:0,12:12:33.08:440,33,0	1/1:1,2:3:6.02:84,6,0
chr10	7218251	.	CT	C	9535.03	PASS	AB=0.821;AC=41;AF=0.732;AN=56;BaseQRankSum=12.276;DP=607;FS=11.394;HRun=10;HaplotypeScore=138.2217;InbreedingCoeff=0.8968;MQ=71.13;MQ0=0;MQRankSum=-1.423;QD=20.07;ReadPosRankSum=1.745;VQSLOD=3.8719;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,33:37:79.10:790,79,0	1/1:3,10:13:26.98:234,27,0	0/1:18,4:17:7.09:7,0,234	0/0:25,0:21:34.99:0,35,299	1/1:4,22:27:68.01:578,68,0	1/1:1,14:15:44.99:390,45,0	1/1:0,24:24:62.99:547,63,0	1/1:6,27:33:74.93:647,75,0	1/1:0,18:18:50.99:443,51,0	1/1:3,16:19:44.97:391,45,0	1/1:3,16:19:50.97:440,51,0	0/0:21,0:21:54.10:0,54,572	0/0:16,0:16:45.11:0,45,489	0/0:10,1:11:4.02:0,4,273	1/1:3,18:21:47.98:417,48,0	1/1:2,13:16:41.02:344,41,0	1/1:3,25:29:62.02:527,62,0	1/1:1,21:22:64.80:552,65,0	1/1:5,21:26:32.73:500,33,0	1/1:2,16:18:44.98:391,45,0	1/1:1,18:19:47.99:417,48,0	0/0:8,0:9:23.90:0,24,246	0/0:22,0:22:51.13:0,51,557	0/0:28,0:28:81.22:0,81,894	1/1:6,25:31:59.93:521,60,0	1/1:2,21:23:32.80:514,33,0	1/1:5,20:25:56.96:495,57,0	1/1:0,17:17:44.99:391,45,0
chr10	7219766	.	G	GA	19915.50	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-16.572;DP=789;FS=1.303;HRun=4;HaplotypeScore=68.8478;InbreedingCoeff=0.9999;MQ=83.41;MQ0=0;MQRankSum=-5.411;QD=35.56;ReadPosRankSum=2.662;VQSLOD=5.4086;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,54:57:99:2011,147,0	1/1:0,12:12:33.11:451,33,0	0/0:27,0:27:75.19:0,75,830	0/0:22,0:22:53.34:0,53,565	1/1:0,26:26:75.12:963,75,0	1/1:0,32:32:90.30:1231,90,0	1/1:2,28:30:69.23:944,69,0	1/1:1,26:27:78.25:1051,78,0	1/1:2,29:31:81.27:1108,81,0	1/1:0,19:19:54.18:739,54,0	1/1:2,19:21:57.19:780,57,0	0/0:32,0:32:81.23:0,81,918	0/0:35,0:35:87.23:0,87,976	0/0:29,0:29:84.22:0,84,943	1/1:3,22:25:60.20:821,60,0	1/1:5,44:49:99:1642,120,0	1/1:2,23:25:60.20:821,60,0	1/1:1,17:18:39.13:533,39,0	1/1:3,26:29:78.26:1066,78,0	1/1:2,21:23:63.17:840,63,0	1/1:2,30:32:81.27:1104,81,0	0/0:26,0:26:75.21:0,75,851	0/0:30,0:30:90.26:0,90,1019	0/0:28,0:28:81.23:0,81,919	1/1:1,16:17:45.15:616,45,0	1/1:2,27:29:81.27:1104,81,0	1/1:0,35:35:99:1352,99,0	1/1:4,19:23:54.18:739,54,0
chr10	7219983	.	CT	C	14867.81	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=14.763;DP=594;FS=0.000;HRun=2;HaplotypeScore=114.7938;InbreedingCoeff=0.9972;MQ=66.80;MQ0=0;MQRankSum=-11.824;QD=34.26;ReadPosRankSum=-3.047;VQSLOD=3.6779;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:14,29:43:99:1339,114,0	1/1:0,7:7:15.05:194,15,0	0/0:16,0:16:42.11:0,42,557	0/0:11,0:11:29.92:0,30,359	1/1:2,19:21:57.18:712,57,0	1/1:5,21:26:72.22:911,72,0	1/1:5,27:32:93.24:1127,93,0	1/1:10,20:30:87.26:1089,87,0	1/1:1,27:28:81.25:1030,81,0	1/1:4,15:19:54.12:668,54,0	1/1:3,16:19:56.91:693,57,0	0/0:20,0:20:57.19:0,57,851	0/0:21,0:21:63.20:0,63,917	0/0:19,0:19:57.17:0,57,817	1/1:3,16:19:54.15:667,54,0	1/1:2,18:20:60.17:758,60,0	1/1:2,23:24:66.20:827,66,0	1/1:3,15:18:51.09:620,51,0	1/1:5,10:15:39.10:467,39,0	1/1:2,13:15:42.13:533,42,0	1/1:7,9:16:36.03:406,36,0	0/0:17,0:17:51.16:0,51,745	0/0:24,0:24:72.23:0,72,1057	0/0:32,0:32:87.26:0,87,1244	1/1:5,9:14:36.08:420,36,0	1/1:3,22:25:66.21:841,66,0	1/1:2,20:22:63.19:794,63,0	1/1:4,16:20:60.19:772,60,0
chr10	7219994	.	C	CT	10546.83	PASS	AB=0.605;AC=39;AF=0.696;AN=56;BaseQRankSum=11.508;DP=596;FS=7.163;HRun=8;HaplotypeScore=124.0480;InbreedingCoeff=0.9149;MQ=71.30;MQ0=0;MQRankSum=-13.645;QD=24.99;ReadPosRankSum=-1.236;VQSLOD=3.3028;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,38:41:99:1144,106,0	1/1:1,3:4:6.02:69,6,0	0/0:18,0:18:21.03:0,21,259	0/0:15,0:16:10.28:0,10,266	1/1:3,20:24:50.85:513,51,0	1/1:5,19:24:60.15:671,60,0	1/1:7,24:31:69.20:790,69,0	1/1:9,20:29:60.16:674,60,0	1/1:8,23:31:69.20:795,69,0	1/1:3,13:16:39.12:450,39,0	1/1:6,15:21:36.02:378,36,0	0/0:18,0:18:45.01:0,45,412	0/0:24,0:24:45.23:0,45,556	0/0:23,0:23:69.04:0,69,632	1/1:3,13:16:42.11:474,42,0	1/1:5,16:21:45.13:517,45,0	0/1:9,17:25:3.78:467,0,4	1/1:5,13:18:42.09:462,42,0	1/1:4,12:16:36.09:406,36,0	1/1:3,11:14:30.04:324,30,0	1/1:4,14:18:29.98:315,30,0	0/0:23,0:23:48.01:0,48,439	0/0:24,0:24:63.02:0,63,572	0/0:28,0:28:81.04:0,81,741	1/1:2,12:14:36.11:413,36,0	1/1:4,21:25:60.18:691,60,0	1/1:4,14:17:45.12:510,45,0	1/1:2,13:15:42.12:484,42,0
chr10	7221664	.	T	TCAG	246.68	PASS	AB=0.882;AC=7;AF=0.125;AN=56;BaseQRankSum=2.004;DP=438;FS=34.682;HRun=0;HaplotypeScore=96.6839;InbreedingCoeff=-0.1528;MQ=79.19;MQ0=0;MQRankSum=-5.677;QD=2.35;ReadPosRankSum=-0.025;VQSLOD=-0.1754;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:20:54.15:0,54,970	0/1:7,2:9:29.35:29,0,314	0/0:15,0:15:42.14:0,42,780	0/0:22,0:22:60.20:0,60,1096	0/0:25,2:27:70.15:0,70,1278	0/0:18,0:18:48.16:0,48,889	0/0:19,0:19:54.19:0,54,1005	0/0:28,0:28:78.24:0,78,1386	0/0:6,0:6:15.05:0,15,279	0/1:18,1:19:16.30:16,0,944	0/0:13,0:13:30.10:0,30,537	0/1:15,1:16:30.91:31,0,681	0/0:15,0:15:39.12:0,39,661	0/0:11,1:12:29.19:0,29,540	0/0:15,0:15:42.14:0,42,782	0/0:10,0:9:24.08:0,24,447	0/0:13,0:12:30.10:0,30,559	0/0:15,0:15:36.12:0,36,671	0/1:14,1:15:28.62:29,0,703	0/1:18,3:21:73.15:73,0,943	0/0:22,0:22:60.21:0,60,1117	0/0:13,0:13:33.11:0,33,615	0/0:16,2:18:1.83:0,2,772	0/0:13,0:13:39.13:0,39,726	0/1:6,4:10:99:167,0,298	0/1:14,1:15:31.24:31,0,685	0/0:11,0:11:30.10:0,30,554	0/0:7,0:7:18.06:0,18,335
chr10	7221733	.	T	TCTC	10403.20	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=9.757;DP=312;FS=74.175;HRun=0;HaplotypeScore=87.1374;InbreedingCoeff=0.9647;MQ=63.08;MQ0=0;MQRankSum=-5.362;QD=51.00;ReadPosRankSum=0.079;VQSLOD=1.6734;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,15:17:36.12:750,36,0	1/1:0,6:6:15.05:317,15,0	0/0:9,0:8:21.07:0,21,330	0/0:10,0:9:21.01:0,21,273	1/1:5,14:19:54.17:1068,54,0	1/1:2,7:8:24.06:449,24,0	1/1:0,13:14:39.12:794,39,0	1/1:6,5:11:33.11:604,33,0	1/1:0,2:2:6.02:128,6,0	1/1:4,6:10:30.09:576,30,0	1/1:3,4:8:15.03:296,15,0	0/0:16,0:16:47.25:0,47,733	0/0:17,0:17:51.10:0,51,826	0/0:15,0:15:45.12:0,45,793	1/1:2,7:9:24.08:503,24,0	1/1:1,6:6:18.06:361,18,0	1/1:4,10:13:32.58:578,33,0	1/1:1,15:17:42.14:860,42,0	1/1:4,7:11:31.92:612,32,0	1/1:2,10:12:33.11:674,33,0	1/1:0,6:7:18.06:374,18,0	0/0:9,0:9:27.06:0,27,444	0/0:17,0:17:51.13:0,51,823	0/0:15,0:15:42.13:0,42,742	1/1:1,7:8:21.07:432,21,0	1/1:2,4:6:16.87:300,17,0	1/1:4,6:10:26.84:501,27,0	1/1:3,2:5:12.04:228,12,0
chr10	7221743	.	TA	T	2667.63	PASS	AB=0.917;AC=41;AF=0.732;AN=56;BaseQRankSum=11.376;DP=331;FS=45.646;HRun=3;HaplotypeScore=111.0865;InbreedingCoeff=0.9049;MQ=67.35;MQ0=0;MQRankSum=-6.356;QD=11.80;ReadPosRankSum=-1.345;VQSLOD=-0.4614;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:17,1:17:33.24:142,33,0	1/1:5,0:5:9.59:39,10,0	0/0:19,0:15:30.48:0,30,336	0/1:10,1:10:2.58:3,0,159	1/1:17,2:19:41.03:210,41,0	1/1:14,0:13:37.20:228,37,0	1/1:15,0:15:26.51:122,27,0	1/1:9,2:11:31.10:211,31,0	1/1:4,0:4:11.22:65,11,0	1/1:9,1:10:27.74:166,28,0	1/1:4,1:5:11.15:62,11,0	0/0:15,0:15:45.13:0,45,561	0/0:14,0:14:37.10:0,37,506	0/0:16,0:16:36.08:0,36,447	1/1:9,2:11:29.13:183,29,0	1/1:7,0:7:19.47:101,19,0	1/1:13,0:12:27.76:153,28,0	1/1:19,1:20:50.85:304,51,0	1/1:11,1:12:28.33:184,28,0	1/1:11,1:12:32.70:157,33,0	1/1:7,0:7:14.55:55,15,0	0/0:10,0:10:24.06:0,24,299	0/0:16,0:16:17.70:0,18,357	0/0:15,0:15:39.07:0,39,477	1/1:8,1:9:13.67:89,14,0	1/1:9,0:9:25.20:161,25,0	1/1:6,3:9:22.17:145,22,0	1/1:3,2:5:11.65:92,12,0
chr10	7221767	.	TTTTA	T	3968.97	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=11.297;DP=389;FS=3.416;HRun=0;HaplotypeScore=126.3934;InbreedingCoeff=0.9692;MQ=75.61;MQ0=1;MQRankSum=-8.026;QD=15.94;ReadPosRankSum=1.469;VQSLOD=3.6044;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:18:19.13:221,19,0	1/1:5,1:6:11.88:109,12,0	0/0:38,0:26:55.21:0,55,950	0/0:21,0:17:42.20:0,42,752	1/1:19,0:19:43.30:282,43,0	1/1:16,0:15:32.52:209,33,0	1/1:12,0:11:21.16:133,21,0	1/1:17,0:17:41.26:262,41,0	1/1:7,0:7:20.70:133,21,0	1/1:20,0:20:52.96:340,53,0	1/1:8,0:8:17.01:102,17,0	0/0:17,0:17:51.11:0,51,1155	0/0:12,0:12:36.12:0,36,895	0/0:14,0:14:33.10:0,33,784	1/1:8,0:8:18.21:115,18,0	1/1:6,1:7:20.63:165,21,0	1/1:16,0:15:32.59:225,33,0	1/1:14,1:15:38.47:283,38,0	1/1:15,0:15:34.02:262,34,0	1/1:14,2:16:41.49:340,41,0	1/1:6,0:6:11.85:77,12,0	0/0:10,0:10:21.06:0,21,498	0/0:14,0:14:39.06:0,39,915	0/0:14,0:14:16.99:0,17,804	1/1:10,0:10:17.72:113,18,0	1/1:16,0:16:43.72:277,44,0	1/1:12,1:13:35.53:265,36,0	1/1:3,0:3:8.87:56,9,0
chr10	7221768	.	TTTA	T	9447.43	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=9.186;DP=387;FS=3.369;HRun=0;HaplotypeScore=98.3779;InbreedingCoeff=0.9682;MQ=75.77;MQ0=1;MQRankSum=-8.638;QD=38.56;ReadPosRankSum=1.363;VQSLOD=5.4616;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,17:18:13.14:502,13,0	1/1:3,3:6:12.04:201,12,0	0/0:38,0:26:52.84:0,53,776	0/0:21,0:17:43.86:0,44,697	1/1:6,13:19:50.66:757,51,0	1/1:1,15:15:33.11:560,33,0	1/1:4,8:11:21.07:356,21,0	1/1:4,13:17:45.06:667,45,0	1/1:0,7:7:21.07:355,21,0	1/1:1,18:19:57.15:934,57,0	1/1:1,7:8:18.02:260,18,0	0/0:17,0:17:51.09:0,51,958	0/0:12,0:12:36.12:0,36,740	0/0:14,0:14:33.03:0,33,637	1/1:2,6:8:21.04:326,21,0	1/1:2,5:7:20.90:301,21,0	1/1:5,11:15:33.06:524,33,0	1/1:6,9:15:39.06:596,39,0	1/1:3,11:14:39.02:505,39,0	1/1:3,13:16:45.11:703,45,0	1/1:4,2:6:11.95:141,12,0	0/0:10,0:10:21.06:0,21,423	0/0:16,0:16:45.08:0,45,837	0/0:14,0:14:17.21:0,17,664	1/1:1,8:9:18.06:304,18,0	1/1:1,15:16:48.08:711,48,0	1/1:1,11:12:36.12:591,36,0	1/1:0,3:3:9.03:152,9,0
chr10	7222021	.	AG	A	17255.67	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=9.888;DP=653;FS=4.412;HRun=2;HaplotypeScore=71.2808;InbreedingCoeff=0.9948;MQ=88.12;MQ0=0;MQRankSum=-7.313;QD=35.87;ReadPosRankSum=3.427;VQSLOD=5.5343;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:2,41:43:99:1398,108,0	1/1:0,5:5:12.04:156,12,0	0/0:27,0:27:75.08:0,75,1093	0/0:23,0:23:59.53:0,60,828	1/1:0,35:35:93.30:1202,93,0	1/1:0,16:16:48.16:622,48,0	1/1:0,30:30:87.28:1128,87,0	1/1:1,27:28:81.25:1040,81,0	1/1:0,25:25:69.22:892,69,0	1/1:0,22:22:63.16:799,63,0	1/1:0,19:19:57.18:727,57,0	0/0:22,0:22:66.21:0,66,968	0/0:19,0:19:57.18:0,57,831	0/0:14,0:14:42.14:0,42,628	1/1:0,20:20:54.18:701,54,0	1/1:0,15:15:36.12:467,36,0	1/1:0,22:22:66.21:857,66,0	1/1:0,22:22:63.20:818,63,0	1/1:0,21:21:57.19:740,57,0	1/1:0,26:26:69.22:896,69,0	1/1:0,37:37:99:1325,102,0	0/0:17,0:17:48.16:0,48,717	0/0:22,0:22:66.22:0,66,973	0/0:28,0:28:84.27:0,84,1237	1/1:0,16:16:45.15:584,45,0	1/1:1,23:24:69.22:896,69,0	1/1:0,35:35:99:1324,102,0	1/1:0,20:20:54.15:684,54,0
chr10	7222408	.	C	CATCT	10174.98	PASS	AB=0.703;AC=41;AF=0.788;AN=52;BaseQRankSum=1.288;DP=732;FS=7.551;HRun=0;HaplotypeScore=179.4794;InbreedingCoeff=0.8091;MQ=64.79;MQ0=1;MQRankSum=-4.091;QD=17.51;ReadPosRankSum=-0.781;VQSLOD=3.9557;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:31,14:46:60.18:1234,60,0	1/1:8,0:9:6:76,6,0	./.	./.	0/0:24,0:26:36.09:0,36,480	1/1:18,0:25:30.10:522,30,0	1/1:21,0:21:11.54:149,12,0	1/1:58,0:58:63.04:730,63,0	1/1:22,0:26:21.07:368,21,0	1/1:24,0:25:18.02:296,18,0	1/1:28,0:29:11.49:199,11,0	0/1:15,11:26:12.38:649,0,12	1/1:13,13:27:36.59:827,37,0	0/0:27,0:28:45.13:0,45,650	1/1:34,0:35:23.42:314,23,0	1/1:22,12:34:63.19:1364,63,0	1/1:16,0:18:8.06:112,8,0	1/1:22,2:25:18.06:341,18,0	1/1:23,0:23:15.51:235,16,0	1/1:29,1:32:24.55:457,25,0	1/1:31,0:31:5.44:95,5,0	1/1:9,10:21:18.06:420,18,0	0/0:21,0:21:30.10:0,30,453	0/0:18,0:19:36.06:0,36,484	1/1:17,9:25:27.09:581,27,0	0/0:17,0:17:27.08:0,27,395	1/1:17,3:20:30.10:623,30,0	1/1:19,5:24:30.09:581,30,0
chr10	7222484	.	T	TAC	21572.04	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=6.867;DP=680;FS=7.259;HRun=0;HaplotypeScore=133.2545;InbreedingCoeff=0.9896;MQ=83.01;MQ0=3;MQRankSum=-6.768;QD=45.04;ReadPosRankSum=2.242;VQSLOD=5.8842;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,36:42:90.31:1620,90,0	1/1:1,6:7:21.07:366,21,0	0/0:28,0:28:78.24:0,78,1041	0/0:17,0:16:45:0,45,553	1/1:0,28:28:66.09:1188,66,0	1/1:5,22:27:63.22:1133,63,0	1/1:3,21:24:51.17:918,51,0	1/1:1,28:29:84.75:1484,85,0	1/1:1,23:25:66.23:1187,66,0	1/1:3,27:31:84.27:1482,84,0	1/1:3,15:18:42.14:755,42,0	0/0:24,0:24:66.22:0,66,922	0/0:26,0:26:78.26:0,78,1088	0/0:25,0:25:69.23:0,69,966	1/1:1,28:29:78.27:1404,78,0	1/1:4,27:31:78.27:1405,78,0	1/1:0,20:20:60.21:1079,60,0	1/1:1,19:20:57.20:1026,57,0	1/1:3,22:26:69.24:1239,69,0	1/1:5,21:26:52.19:968,52,0	1/1:2,16:18:38.73:701,39,0	0/0:23,0:23:66.22:0,66,924	0/0:18,0:18:51.15:0,51,680	0/0:40,0:40:99:0,114,1574	1/1:4,24:28:71.88:1296,72,0	1/1:2,21:23:63.22:1134,63,0	1/1:0,19:19:57.20:1026,57,0	1/1:2,5:5:9.03:162,9,0
chr10	7223010	.	TGC	T	1984.96	PASS	AB=0.978;AC=26;AF=0.464;AN=56;BaseQRankSum=14.661;DP=527;FS=6.633;HRun=0;HaplotypeScore=153.4344;InbreedingCoeff=-0.0660;MQ=52.30;MQ0=7;MQRankSum=-8.873;QD=6.40;ReadPosRankSum=5.400;VQSLOD=2.7489;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:18:22.07:102,22,0	1/1:2,0:2:5.85:36,6,0	0/0:43,0:15:34.56:0,35,482	0/0:47,0:15:31.08:0,31,389	0/1:14,1:15:48.86:64,0,49	0/1:12,0:12:5.14:76,0,5	0/1:11,0:11:24.22:24,0,50	0/1:20,0:19:76.48:152,0,76	0/1:10,1:11:40.04:99,0,40	0/1:15,2:17:20.19:250,0,20	1/1:10,0:10:3.28:11,3,0	0/0:18,0:18:42.11:0,42,733	0/0:21,0:20:59.37:0,59,1013	0/0:9,0:9:21.07:0,21,403	0/1:16,1:17:5.14:48,0,5	0/1:17,0:17:99:103,0,102	1/1:13,0:11:2.62:138,3,0	0/1:15,0:11:21.29:61,0,21	0/1:19,0:19:99:145,0,101	1/1:13,0:13:18.35:110,18,0	0/1:19,0:17:12.32:46,0,12	0/0:26,0:26:66.14:0,66,1059	0/0:16,0:16:22.33:0,22,501	0/0:36,0:36:99:0,99,1756	0/1:19,0:18:27.96:144,0,28	0/1:20,0:19:35.36:182,0,35	1/1:22,0:22:1.45:243,1,0	0/1:18,0:18:99:125,0,123
chr10	7223012	.	CGT	C	6089.20	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=12.082;DP=526;FS=8.582;HRun=0;HaplotypeScore=139.9041;InbreedingCoeff=0.9462;MQ=49.02;MQ0=12;MQRankSum=-7.375;QD=19.58;ReadPosRankSum=0.772;VQSLOD=5.0892;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,17:18:35.86:353,36,0	1/1:1,1:2:6.02:76,6,0	0/0:43,0:13:25.51:0,26,321	0/0:47,0:13:26.45:0,26,268	1/1:5,10:15:15.05:193,15,0	1/1:1,10:11:26.89:257,27,0	1/1:5,7:12:14.28:135,14,0	1/1:11,10:20:36.12:466,36,0	1/1:3,6:9:18.01:208,18,0	1/1:6,12:17:42.13:533,42,0	1/1:1,9:10:5.36:29,5,0	0/0:18,0:18:42.13:0,42,655	0/0:23,0:22:63.13:0,63,953	0/0:9,0:9:21.07:0,21,357	1/1:4,13:17:20.91:198,21,0	1/1:5,12:17:24.03:292,24,0	1/1:1,10:9:27.05:330,27,0	1/1:8,7:11:12.78:207,13,0	1/1:9,10:19:36.09:438,36,0	1/1:0,13:13:21.03:254,21,0	1/1:6,14:16:14.99:162,15,0	0/0:24,0:24:60.19:0,60,957	0/0:15,0:15:29.75:0,30,442	0/0:36,0:36:99:0,99,1603	1/1:4,16:18:36.02:416,36,0	1/1:8,13:19:45.14:565,45,0	1/1:5,17:22:48.13:590,48,0	1/1:9,9:18:30.10:389,30,0
chr10	7223044	.	TGTGGTGTGTGTGTA	T	4792.10	PASS	AB=0.997;AC=28;AF=0.519;AN=54;BaseQRankSum=8.829;DP=650;FS=2.220;HRun=0;HaplotypeScore=202.3024;InbreedingCoeff=0.0055;MQ=35.69;MQ0=99;MQRankSum=-9.099;QD=11.72;ReadPosRankSum=-0.394;VQSLOD=3.6847;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:18:23.09:23,0,98	1/1:4,0:3:9.03:172,9,0	0/0:38,0:2:3.01:0,3,34	./.	1/1:13,4:15:5.91:62,6,0	0/1:21,0:18:99:160,0,111	0/1:27,0:21:57.33:57,0,245	0/1:30,0:16:99:135,0,114	0/1:14,0:13:44.43:189,0,44	0/1:28,0:21:32.65:895,0,33	1/1:14,0:14:2.90:51,3,0	0/0:24,0:19:36.12:0,36,1135	0/0:22,0:21:57.19:0,57,1936	0/0:16,0:13:30.10:0,30,912	1/1:18,0:15:6.76:119,7,0	1/1:18,0:16:16.96:420,17,0	1/1:15,0:11:5.43:372,5,0	0/1:16,0:12:93.29:360,0,93	0/1:26,0:15:99:407,0,218	0/1:22,0:19:71.26:261,0,71	0/1:46,0:29:66.27:66,0,397	0/0:30,0:24:52.69:0,53,1577	0/0:19,0:17:35.60:0,36,1013	0/0:44,0:42:99:0,103,3219	1/1:21,0:16:20.11:442,20,0	0/1:23,0:14:99:145,0,301	0/1:12,0:11:65.69:208,0,66	1/1:10,0:9:18.06:248,18,0
chr10	7223046	.	TG	T	1950.15	PASS	AB=0.818;AC=23;AF=0.442;AN=52;BaseQRankSum=9.549;DP=642;FS=9.308;HRun=2;HaplotypeScore=146.2738;InbreedingCoeff=-0.1245;MQ=34.35;MQ0=99;MQRankSum=-9.461;QD=5.05;ReadPosRankSum=1.616;VQSLOD=0.0126;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,4:18:13.19:0,13,127	0/1:4,0:3:2.60:3,0,41	./.	./.	1/1:9,7:15:5.73:62,6,0	0/1:12,9:18:56.83:57,0,80	0/1:22,5:21:20.79:21,0,145	0/1:27,3:16:99:112,0,163	0/1:11,3:13:89.41:89,0,141	0/1:17,11:21:89.24:328,0,89	1/1:1,8:14:2.64:12,3,0	0/0:24,0:19:35.65:0,36,518	0/0:21,0:20:57.19:0,57,833	0/0:16,0:13:30.10:0,30,440	0/1:10,8:15:6.76:7,0,18	0/1:13,5:16:1.89:170,0,2	1/1:9,6:11:5.61:216,6,0	0/1:16,1:12:84.35:98,0,84	0/1:24,4:17:99:176,0,191	0/1:12,8:17:12.41:133,0,12	0/1:41,6:28:9.91:10,0,151	0/0:30,0:24:53.08:0,53,663	0/0:19,0:17:36.12:0,36,511	0/0:43,1:42:99:0,103,1480	0/1:11,10:16:1.85:171,0,2	0/1:23,2:16:77.23:77,0,159	0/1:8,3:10:23.83:204,0,24	1/1:9,1:9:17.67:165,18,0
chr10	7223047	.	G	GT	2181.59	PASS	AB=0.907;AC=23;AF=0.442;AN=52;BaseQRankSum=9.330;DP=634;FS=7.869;HRun=1;HaplotypeScore=141.9348;InbreedingCoeff=-0.1719;MQ=34.32;MQ0=99;MQRankSum=-9.276;QD=5.76;ReadPosRankSum=0.866;VQSLOD=0.1523;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,6:17:13.34:0,13,125	0/1:3,1:3:38.83:39,0,44	./.	./.	1/1:17,0:15:5.73:62,6,0	0/1:19,0:17:56.83:57,0,80	0/1:25,2:21:20.30:20,0,146	0/1:32,0:18:99:132,0,156	0/1:12,1:12:89.43:89,0,134	0/1:29,0:22:99:334,0,107	1/1:14,0:14:2.74:12,3,0	0/0:24,0:19:35.65:0,36,494	0/0:21,0:20:57.19:0,57,785	0/0:16,0:13:30.10:0,30,414	0/1:17,2:15:3.01:3,0,22	0/1:15,2:16:1.89:171,0,2	1/1:12,2:10:9.78:223,10,0	0/1:12,3:12:95.14:95,0,96	0/1:26,2:17:99:197,0,217	0/1:18,1:16:23.37:134,0,23	0/1:44,3:28:28.08:28,0,185	0/0:30,0:24:50.47:0,50,631	0/0:19,0:17:36.10:0,36,487	0/0:44,0:42:99:0,103,1399	0/1:20,0:16:21.21:167,0,21	0/1:20,2:13:99:145,0,168	0/1:5,4:8:20.82:204,0,21	1/1:4,6:9:18.05:234,18,0
chr10	7223057	.	TA	T	2401.62	PASS	AB=0.805;AC=27;AF=0.500;AN=54;BaseQRankSum=8.631;DP=590;FS=4.631;HRun=1;HaplotypeScore=124.5144;InbreedingCoeff=-0.0137;MQ=35.84;MQ0=89;MQRankSum=-6.636;QD=6.24;ReadPosRankSum=-2.617;VQSLOD=-0.2393;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:8,9:13:56.46:56,0,56	1/1:3,1:2:6.02:75,6,0	0/0:22,1:1:3.01:0,3,34	./.	0/1:10,7:15:0:0,0,0	0/1:12,7:16:98.63:106,0,99	0/1:23,3:19:25.93:26,0,91	0/1:30,5:22:99:181,0,354	0/1:11,2:12:61.65:62,0,182	0/1:12,11:21:69.89:502,0,70	1/1:6,8:14:3.01:48,3,0	0/0:22,0:16:23.39:0,23,274	0/0:19,0:19:49.74:0,50,701	0/0:15,1:13:29.59:0,30,364	1/1:6,10:12:6.45:85,6,0	1/1:12,6:16:17.12:228,17,0	1/1:5,7:8:12.50:172,12,0	0/1:7,8:13:96.58:249,0,97	0/1:25,5:20:99:154,0,428	0/1:9,8:15:35.37:108,0,35	0/1:29,10:25:56.92:57,0,241	0/0:27,0:23:49.19:0,49,574	0/0:20,2:20:26.09:0,26,301	0/0:42,0:40:93.85:0,94,1273	1/1:12,9:16:21.43:252,21,0	0/1:22,0:15:62.44:62,0,196	0/1:13,0:12:32.19:97,0,32	1/1:5,0:4:6:54,6,0
chr10	7223058	.	AGT	A	1196.24	PASS	AB=0.928;AC=22;AF=0.440;AN=50;BaseQRankSum=-4.934;DP=591;FS=9.105;HRun=0;HaplotypeScore=137.0856;InbreedingCoeff=0.2354;MQ=35.98;MQ0=87;MQRankSum=3.343;QD=3.66;ReadPosRankSum=3.371;VQSLOD=2.1610;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:17,0:14:16.08:23,0,16	0/1:4,0:2:3.05:3,0,21	./.	./.	./.	0/1:17,0:17:9.23:23,0,9	0/1:24,0:20:24.57:25,0,27	0/0:35,0:22:18.02:0,18,111	1/1:11,0:12:2.58:26,3,0	0/1:26,0:21:4.78:5,0,65	0/0:15,0:15:2.60:0,3,10	1/1:11,9:16:12.03:133,12,0	1/1:15,3:19:15.83:164,16,0	0/1:15,1:13:30.25:116,0,30	0/0:17,0:13:5.72:0,6,51	1/1:9,0:16:8.52:42,9,0	0/0:12,0:8:2.90:0,3,16	0/0:17,0:13:4.48:0,4,71	0/1:27,0:19:2.24:2,0,49	0/0:15,0:15:3.01:0,3,32	0/0:43,0:26:12.30:0,12,108	1/1:15,13:23:26.89:275,27,0	1/1:14,8:20:17.71:199,18,0	1/1:37,5:41:28.26:275,28,0	0/1:15,0:16:3.16:41,0,3	0/0:14,0:15:6.24:0,6,40	0/0:2,0:12:2.43:0,2,6	0/0:3,0:4:0.94:0,1,3
chr10	7223066	.	T	TA	105.20	PASS	AB=0.938;AC=11;AF=0.196;AN=56;BaseQRankSum=3.253;DP=621;FS=6.152;HRun=0;HaplotypeScore=135.2464;InbreedingCoeff=0.2670;MQ=37.00;MQ0=91;MQRankSum=-1.726;QD=0.71;ReadPosRankSum=-1.027;VQSLOD=1.9378;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:16:19.85:0,20,219	0/0:4,0:2:6.02:0,6,78	1/1:21,0:1:1.25:3,1,0	0/0:33,1:4:12.03:0,12,148	0/0:15,0:13:0:0,0,0	0/1:22,1:19:13.79:14,0,157	0/1:24,2:19:60.05:60,0,208	0/0:34,0:21:48.16:0,48,649	0/1:13,1:13:18.07:18,0,164	0/0:27,0:22:57.16:0,57,726	0/0:15,0:15:6.02:0,6,84	0/0:23,0:17:24.89:0,25,240	0/0:21,0:20:56.72:0,57,627	0/0:17,0:14:32.85:0,33,361	0/0:19,0:15:8.98:0,9,122	0/0:20,0:18:28.61:0,29,187	0/0:13,0:9:7.74:0,8,91	0/0:18,0:13:24.07:0,24,310	0/0:29,0:21:38.67:0,39,508	0/0:16,0:15:13.21:0,13,84	0/0:48,0:31:25.92:0,26,335	0/0:29,0:24:49.31:0,49,436	0/0:22,0:20:29.67:0,30,272	0/0:48,0:45:99:0,100,1093	0/1:18,2:15:49.79:50,0,100	0/1:21,0:16:22.35:22,0,153	1/1:14,0:14:12.92:63,13,0	1/1:7,0:6:4.03:15,4,0
chr10	7223067	.	GT	G	511.65	PASS	AB=0.926;AC=6;AF=0.107;AN=56;BaseQRankSum=4.452;DP=619;FS=19.970;HRun=1;HaplotypeScore=133.2042;InbreedingCoeff=0.5837;MQ=37.29;MQ0=92;MQRankSum=-3.783;QD=7.99;ReadPosRankSum=-0.907;VQSLOD=-0.4667;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:16:20.24:0,20,202	0/0:4,0:2:6.02:0,6,78	0/1:19,0:1:0:0,0,0	0/0:30,1:4:12.04:0,12,147	0/0:15,0:13:0:0,0,0	0/0:23,0:19:23.60:0,24,222	0/0:26,0:19:23.28:0,23,238	0/0:34,0:21:48.16:0,48,666	0/0:15,0:14:18.73:0,19,178	0/0:28,0:23:60.16:0,60,722	0/0:15,0:15:6.02:0,6,79	0/0:23,0:17:22.69:0,23,196	0/0:21,0:20:49.36:0,49,455	0/0:17,0:14:29.22:0,29,301	0/0:19,0:15:11.72:0,12,168	0/0:20,0:18:16.68:0,17,141	0/0:14,0:10:3.27:0,3,105	0/0:18,0:13:24.06:0,24,317	0/0:29,0:21:19.60:0,20,527	0/0:14,0:14:6.20:0,6,56	0/0:47,0:30:26.24:0,26,366	0/0:29,0:25:45.69:0,46,359	0/0:22,0:20:24.26:0,24,187	0/0:49,0:46:89.89:0,90,927	0/0:20,0:15:16.49:0,16,88	0/1:19,4:16:99:207,0,126	1/1:3,12:14:29.31:277,29,0	1/1:5,2:6:12.03:150,12,0
chr10	7223068	.	T	TA	138.94	PASS	AB=0.965;AC=12;AF=0.214;AN=56;BaseQRankSum=4.058;DP=612;FS=10.380;HRun=0;HaplotypeScore=130.7420;InbreedingCoeff=0.1290;MQ=37.69;MQ0=88;MQRankSum=-1.138;QD=0.78;ReadPosRankSum=-1.031;VQSLOD=1.8408;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:16:20.53:0,21,220	0/0:4,0:2:6.02:0,6,77	1/1:20,0:2:1.24:3,1,0	0/0:31,1:5:12.04:0,12,159	0/0:14,0:12:0:0,0,0	0/0:22,0:18:6.56:0,7,190	0/1:26,0:19:25.94:26,0,172	0/0:34,0:21:48.16:0,48,659	0/1:15,0:14:0.51:1,0,135	0/0:28,0:23:59.77:0,60,742	0/0:15,0:15:6.02:0,6,86	0/0:23,0:17:26.31:0,26,258	0/0:19,0:18:50.70:0,51,546	0/0:18,0:15:32.85:0,33,363	0/0:19,0:15:11.99:0,12,162	0/0:20,0:18:23.41:0,23,147	0/1:12,1:10:35.52:36,0,91	0/0:17,0:12:24.06:0,24,309	0/1:24,2:19:43.05:43,0,504	0/1:11,2:13:39.60:40,0,40	0/0:47,0:30:25.11:0,25,345	0/0:29,0:25:53.31:0,53,484	0/0:23,0:21:29.69:0,30,273	0/0:50,0:47:99:0,103,1071	0/1:20,0:15:3.22:3,0,46	0/1:22,0:15:55.24:55,0,95	0/1:16,0:15:3.79:29,0,4	1/1:7,0:6:10.24:41,10,0
chr10	7223078	.	T	TA	1013.31	PASS	AB=0.808;AC=5;AF=0.089;AN=56;BaseQRankSum=5.776;DP=611;FS=9.538;HRun=0;HaplotypeScore=109.4686;InbreedingCoeff=0.6506;MQ=41.11;MQ0=72;MQRankSum=-2.851;QD=20.27;ReadPosRankSum=0.491;VQSLOD=4.8012;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:25:44.98:0,45,500	0/0:4,0:3:6.02:0,6,77	0/0:21,0:5:7.27:0,7,120	0/0:36,0:13:30.07:0,30,393	0/0:15,0:13:6.02:0,6,83	0/0:19,1:16:35.74:0,36,407	0/0:30,0:23:44.73:0,45,516	0/0:37,0:24:44.71:0,45,732	0/0:15,0:14:23.47:0,23,262	0/0:23,0:20:48.12:0,48,620	0/0:14,0:14:12.04:0,12,165	0/0:24,0:18:29.36:0,29,320	0/0:17,0:16:41.67:0,42,419	0/0:17,0:14:29.84:0,30,322	0/0:18,0:15:11.99:0,12,166	0/0:16,0:14:23.57:0,24,247	0/0:14,0:11:17.85:0,18,247	0/0:20,0:15:30.10:0,30,408	0/0:22,0:17:41.95:0,42,536	0/0:9,0:9:14.69:0,15,191	0/0:45,0:31:16.22:0,16,278	0/0:27,0:25:54.04:0,54,531	0/0:27,0:25:44.74:0,45,478	0/0:45,0:42:89.63:0,90,993	0/0:15,0:12:26.40:0,26,242	0/1:16,5:15:74.61:347,0,75	1/1:3,17:20:36.08:590,36,0	1/1:3,5:7:14.72:202,15,0
chr10	7223176	.	CTTGTTT	C	1732.73	PASS	AB=0.625;AC=5;AF=0.089;AN=56;BaseQRankSum=0.908;DP=474;FS=12.083;HRun=0;HaplotypeScore=118.8084;InbreedingCoeff=0.7545;MQ=72.30;MQ0=1;MQRankSum=-4.917;QD=42.26;ReadPosRankSum=0.567;VQSLOD=2.9068;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:24:69.20:0,69,2022	0/0:10,0:11:32.96:0,33,337	0/0:24,0:14:35.99:0,36,640	0/0:15,0:13:14.23:0,14,277	0/0:19,0:19:50.98:0,51,631	0/0:14,0:15:42.02:0,42,426	0/0:26,0:26:71.45:0,71,674	0/0:20,0:20:52.72:0,53,521	0/0:8,0:8:18.04:0,18,268	0/0:12,0:12:35.56:0,36,432	0/0:12,0:12:26.04:0,26,277	0/0:19,0:19:54.04:0,54,1301	0/0:18,0:18:54.13:0,54,1543	0/0:14,0:14:36.09:0,36,1041	0/0:13,0:13:26.60:0,27,293	0/0:11,0:11:27.04:0,27,306	0/0:29,0:28:62.36:0,62,720	0/0:13,0:13:35.52:0,36,326	0/0:21,0:22:56.76:0,57,672	0/0:19,0:20:52.15:0,52,653	0/0:19,0:20:47.39:0,47,471	0/0:12,0:12:36.12:0,36,885	0/0:17,0:17:51.16:0,51,1411	0/0:22,0:23:64.36:0,64,1769	0/0:14,0:14:30.01:0,30,298	0/1:8,11:20:28.19:840,0,28	1/1:9,7:17:46.46:738,46,0	1/1:0,4:4:12.04:280,12,0
chr10	7223179	.	GTTT	G	4382.36	PASS	AB=0.632;AC=35;AF=0.625;AN=56;BaseQRankSum=8.397;DP=486;FS=1.451;HRun=15;HaplotypeScore=84.9132;InbreedingCoeff=0.7799;MQ=70.81;MQ0=1;MQRankSum=-1.756;QD=14.71;ReadPosRankSum=7.584;VQSLOD=3.1485;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:72.10:0,72,1126	1/1:5,5:10:11.86:134,12,0	0/0:25,0:13:18.03:0,18,209	0/0:15,0:12:11.35:0,11,83	1/1:7,10:19:12.81:148,13,0	1/1:2,12:15:28.41:318,28,0	1/1:6,16:23:47.93:522,48,0	1/1:4,11:18:25.04:254,25,0	0/1:2,5:7:11.66:89,0,12	1/1:2,9:12:23.83:251,24,0	1/1:4,8:13:14.70:152,15,0	0/0:20,0:20:39.08:0,39,614	0/0:21,0:22:60.08:0,60,899	0/0:15,0:15:36.11:0,36,595	1/1:5,7:13:7.43:98,7,0	1/1:3,9:12:17.96:201,18,0	1/1:5,21:28:47.67:504,48,0	1/1:3,9:13:22.06:280,22,0	0/1:9,9:20:12.06:285,0,12	1/1:5,14:19:21.35:263,21,0	1/1:8,11:21:21.89:262,22,0	0/0:14,0:15:33.01:0,33,417	0/0:19,0:20:51.14:0,51,799	0/0:27,0:28:67.39:0,67,1034	0/1:7,7:14:0.07:150,0,0	1/1:19,1:20:32.40:231,32,0	1/1:17,0:17:24.87:162,25,0	1/1:4,0:4:11.87:79,12,0
chr10	7224325	.	G	GA	12600.52	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-14.291;DP=578;FS=0.734;HRun=5;HaplotypeScore=77.6289;InbreedingCoeff=0.9950;MQ=86.04;MQ0=0;MQRankSum=2.329;QD=33.16;ReadPosRankSum=3.376;VQSLOD=5.2621;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,108,1136	1/1:0,10:10:27.09:353,27,0	0/0:24,0:24:49:0,49,518	0/0:16,0:16:29.68:0,30,323	1/1:1,15:16:45.15:588,45,0	1/1:3,18:21:51.17:666,51,0	1/1:2,21:23:45.15:588,45,0	1/1:4,13:17:39.12:496,39,0	1/1:1,18:19:48.16:627,48,0	1/1:0,13:13:39.13:510,39,0	1/1:2,10:12:30.10:389,30,0	0/0:29,0:29:78.16:0,78,823	0/0:20,0:20:54.07:0,54,564	0/0:10,0:10:21.05:0,21,224	1/1:3,18:21:54.17:694,54,0	1/1:1,21:22:60.20:784,60,0	1/1:3,49:52:99:1646,126,0	1/1:1,26:27:75.24:980,75,0	1/1:2,11:13:33.09:415,33,0	1/1:1,22:23:66.16:843,66,0	1/1:4,26:30:77.28:985,77,0	0/0:19,0:19:54:0,54,561	0/0:10,0:10:17.96:0,18,178	0/0:30,0:30:60.05:0,60,617	1/1:0,29:29:75.24:980,75,0	1/1:2,13:15:39.13:510,39,0	1/1:3,9:12:27.09:352,27,0	1/1:0,5:5:15.05:196,15,0
chr10	7224360	.	A	ACG	264.36	PASS	AB=0.826;AC=6;AF=0.107;AN=56;BaseQRankSum=6.360;DP=569;FS=4.295;HRun=0;HaplotypeScore=120.0118;InbreedingCoeff=0.2209;MQ=87.14;MQ0=0;MQRankSum=-6.175;QD=3.78;ReadPosRankSum=1.456;VQSLOD=2.7037;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,135,2157	0/0:9,0:9:27.09:0,27,440	0/0:27,0:27:78.19:0,78,1172	0/0:15,0:15:36:0,36,528	0/0:17,0:17:51.17:0,51,832	0/0:20,0:20:57.17:0,57,882	0/0:25,0:25:54.14:0,54,820	0/0:15,0:15:42.14:0,42,684	0/0:21,0:21:57.19:0,57,909	0/0:17,0:17:51.15:0,51,797	0/0:11,0:11:33.10:0,33,514	0/1:14,4:18:91.18:91,0,177	0/1:7,3:10:54.61:81,0,55	1/1:4,3:7:14.85:126,15,0	0/0:17,0:16:48.15:0,48,758	0/0:26,0:26:75.23:0,75,1174	0/0:50,0:50:99:0,132,2095	0/0:30,0:30:90.31:0,90,1468	0/0:21,0:21:63.22:0,63,1027	0/0:25,0:25:75.26:0,75,1222	0/0:33,0:33:90.26:0,90,1413	0/0:13,1:14:3.55:0,4,178	0/1:7,2:9:50.99:51,0,53	0/1:23,3:26:43.22:43,0,140	0/0:21,0:21:54.15:0,54,832	0/0:16,0:16:48.16:0,48,773	0/0:16,0:16:48.16:0,48,778	0/0:8,0:8:24.08:0,24,391
chr10	7224361	.	T	TACGGGCGGGCACTGC	6594.61	PASS	AB=0.876;AC=7;AF=0.125;AN=56;BaseQRankSum=3.248;DP=599;FS=6.969;HRun=0;HaplotypeScore=268.2983;InbreedingCoeff=0.1792;MQ=87.06;MQ0=0;MQRankSum=-8.945;QD=58.88;ReadPosRankSum=2.479;VQSLOD=3.2239;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,135,5024	0/0:9,0:9:27.09:0,27,985	0/0:29,0:29:78.25:0,78,2224	0/0:16,0:16:42.14:0,42,1275	0/0:17,0:17:51.18:0,51,2069	0/0:19,0:19:54.19:0,54,2239	0/0:25,0:25:57.16:0,57,1909	0/0:15,0:15:42.14:0,42,1337	0/0:21,0:21:57.20:0,57,2389	0/0:17,0:17:51.18:0,51,1796	0/0:11,0:11:33.10:0,33,1177	0/1:24,4:28:99:2369,0,204	0/1:10,3:13:98.22:1014,0,98	1/1:8,2:11:18.06:879,18,0	0/0:17,0:16:48.16:0,48,1911	0/0:25,0:25:72.25:0,72,2619	0/0:49,0:49:99:0,129,4703	0/0:30,0:30:90.31:0,90,3790	0/0:21,0:21:63.22:0,63,2244	0/0:25,0:25:75.26:0,75,2940	0/0:34,0:34:96.27:0,96,3208	0/1:14,1:15:99:388,0,286	0/1:8,2:10:99:426,0,102	0/1:32,3:35:99:1518,0,240	0/0:22,0:22:54.15:0,54,1866	0/0:16,0:16:48.16:0,48,1929	0/0:16,0:16:48.16:0,48,1861	0/0:8,0:8:24.08:0,24,1035
chr10	7224750	.	AGGAGC	A	2293.63	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=7.029;DP=251;FS=4.926;HRun=0;HaplotypeScore=59.4009;InbreedingCoeff=0.8957;MQ=87.10;MQ0=0;MQRankSum=-9.382;QD=53.34;ReadPosRankSum=1.472;VQSLOD=3.5333;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:30.10:0,30,892	0/0:1,0:1:3.01:0,3,95	0/0:10,0:10:27.09:0,27,684	0/0:10,0:10:27.09:0,27,769	0/0:5,0:5:15.05:0,15,444	0/0:7,0:7:21.07:0,21,665	0/0:14,0:14:39.13:0,39,1139	0/0:10,0:10:21.06:0,21,526	0/0:5,0:5:15.05:0,15,475	0/0:14,0:14:39.13:0,39,1189	0/0:5,0:5:15.05:0,15,468	1/1:0,14:14:42.14:910,42,0	1/1:0,3:3:9.03:195,9,0	1/1:1,6:7:18.06:390,18,0	0/0:6,0:6:18.06:0,18,543	0/0:10,0:10:30.10:0,30,902	0/0:17,0:17:51.17:0,51,1472	0/0:14,0:14:42.14:0,42,1175	0/0:11,0:11:30.10:0,30,913	0/0:4,0:4:12.04:0,12,380	0/0:31,0:31:90.29:0,90,2627	1/1:0,10:10:27.09:585,27,0	1/1:0,3:3:9.03:195,9,0	1/1:1,5:6:9.03:195,9,0	0/0:7,0:7:21.07:0,21,616	0/0:8,0:8:24.07:0,24,666	0/0:4,0:4:12.03:0,12,290	0/0:4,0:4:12.04:0,12,312
chr10	7225219	.	C	CGG	4526.99	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-10.509;DP=577;FS=2.455;HRun=7;HaplotypeScore=69.3883;InbreedingCoeff=0.9759;MQ=90.00;MQ0=1;MQRankSum=-2.575;QD=32.11;ReadPosRankSum=-0.025;VQSLOD=4.7901;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:93.22:0,93,1067	0/0:10,0:10:24.06:0,24,280	0/0:25,0:24:57.08:0,57,616	0/0:23,0:23:53.49:0,53,581	0/0:14,0:14:36.09:0,36,409	1/1:2,7:9:15.05:246,15,0	1/1:5,23:29:65.71:1043,66,0	0/0:20,0:20:39.06:0,39,436	1/1:3,13:17:29.59:449,30,0	0/0:14,0:14:33.09:0,33,384	0/0:13,0:13:30.08:0,30,349	0/0:27,0:27:69.19:0,69,803	0/0:17,0:17:48.08:0,48,524	0/0:20,0:20:45.11:0,45,524	0/0:22,0:23:62.91:0,63,711	1/1:3,16:21:30.10:492,30,0	1/1:6,32:39:90.30:1457,90,0	0/0:34,0:34:90.19:0,90,1020	1/1:3,13:15:36.05:525,36,0	1/1:1,5:6:15.01:217,15,0	0/0:36,0:36:96.24:0,96,1104	0/0:10,0:10:27.07:0,27,313	0/0:11,0:11:30.09:0,30,349	0/0:56,0:56:99:0,156,1802	1/1:1,3:4:6.02:98,6,0	0/0:17,0:17:39.09:0,39,454	0/0:19,0:19:57.17:0,57,663	0/0:12,0:12:30.08:0,30,349
chr10	7225906	.	A	AAC	2299.40	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=-9.911;DP=798;FS=2.557;HRun=0;HaplotypeScore=96.8096;InbreedingCoeff=0.8360;MQ=87.53;MQ0=2;MQRankSum=-1.015;QD=37.09;ReadPosRankSum=0.332;VQSLOD=5.8159;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,105,1351	0/1:11,0:11:26.54:27,0,246	0/0:29,0:29:64.79:0,65,722	0/0:31,0:30:60.18:0,60,746	0/0:16,0:16:33.11:0,33,425	0/0:26,0:26:69.20:0,69,860	0/0:53,0:52:99:0,144,1796	0/0:42,0:42:99:0,99,1261	0/0:27,0:27:69.22:0,69,887	0/0:30,0:30:81.26:0,81,1042	0/0:11,0:11:30.10:0,30,386	0/0:29,0:29:69.22:0,69,876	0/0:24,0:24:63.20:0,63,808	0/0:25,0:25:66.21:0,66,849	0/0:51,0:51:99:0,129,1660	0/0:34,0:34:90.29:0,90,1158	0/0:34,0:34:99:0,99,1239	0/0:30,0:30:75.21:0,75,933	0/0:13,0:13:33.10:0,33,411	0/0:22,0:22:54.18:0,54,695	0/0:79,0:78:99:0,220,2776	0/0:20,0:20:51.17:0,51,656	0/0:14,0:14:36.12:0,36,463	0/0:43,0:43:99:0,111,1376	0/0:14,0:14:36.12:0,36,463	1/1:0,20:19:57.19:954,57,0	1/1:0,22:21:63.22:1062,63,0	1/1:0,9:9:24.08:405,24,0
chr10	7226114	.	GGTGGCC	G	547.91	PASS	AB=0.773;AC=5;AF=0.089;AN=56;BaseQRankSum=7.714;DP=638;FS=2.977;HRun=0;HaplotypeScore=154.1511;InbreedingCoeff=-0.0981;MQ=68.06;MQ0=0;MQRankSum=-5.947;QD=8.84;ReadPosRankSum=3.210;VQSLOD=2.8304;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,111,3996	0/0:18,0:18:51.18:0,51,1866	0/0:17,0:17:45.15:0,45,1617	0/0:19,0:19:39.02:0,39,1725	0/0:16,0:16:48.16:0,48,1681	0/0:20,0:20:57.18:0,57,2057	0/0:44,0:44:99:0,132,4832	0/0:29,0:29:81.19:0,81,2943	0/0:18,0:18:51.18:0,51,1906	0/0:23,0:23:69.23:0,69,2503	0/0:12,0:12:36.12:0,36,1194	0/1:9,3:12:99:105,0,587	0/1:8,6:14:99:198,0,567	0/1:9,6:15:99:259,0,616	0/0:26,0:26:78.25:0,78,2809	0/0:23,0:23:69.24:0,69,2598	0/0:40,0:40:99:0,120,4513	0/0:36,0:36:99:0,105,3879	0/0:15,0:15:39.13:0,39,1456	0/0:19,0:19:54.17:0,54,1791	0/0:56,0:56:99:0,166,6136	0/1:12,2:14:29.51:30,0,824	0/1:5,2:7:74.44:74,0,218	0/0:14,1:15:30.02:0,30,688	0/0:22,0:22:66.23:0,66,2440	0/0:26,0:26:78.27:0,78,2934	0/0:33,0:32:99:0,99,3652	0/0:10,0:10:30.10:0,30,1129
chr10	7226121	.	AGCAGGAAGGCATGG	A	1461.37	PASS	AB=0.775;AC=5;AF=0.089;AN=56;BaseQRankSum=7.404;DP=645;FS=3.120;HRun=0;HaplotypeScore=260.4265;InbreedingCoeff=-0.0981;MQ=67.92;MQ0=0;MQRankSum=-6.598;QD=22.83;ReadPosRankSum=4.504;VQSLOD=2.1212;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,102,4949	0/0:17,0:17:51.18:0,51,2689	0/0:16,0:16:45.15:0,45,2062	0/0:21,0:21:61.43:0,61,2519	0/0:15,0:15:45.15:0,45,2432	0/0:19,0:19:57.20:0,57,3314	0/0:44,0:44:99:0,132,6980	0/0:28,0:28:81.28:0,81,3620	0/0:20,0:20:57.20:0,57,2760	0/0:25,0:25:75.25:0,75,3860	0/0:11,0:11:30.09:0,30,1274	0/1:9,3:12:99:267,0,470	0/1:9,6:15:99:496,0,496	0/1:10,6:16:99:576,0,598	0/0:23,0:23:69.20:0,69,3766	0/0:25,0:25:75.26:0,75,4657	0/0:42,0:42:99:0,126,7470	0/0:35,0:35:99:0,102,6181	0/0:17,0:17:45.15:0,45,2055	0/0:18,0:18:51.18:0,51,2362	0/0:57,0:57:99:0,169,9674	0/1:13,2:15:56.68:57,0,551	0/1:4,2:6:99:183,0,148	0/0:17,1:18:42.42:0,42,858	0/0:22,0:22:66.23:0,66,3480	0/0:29,0:29:87.30:0,87,3882	0/0:33,0:32:99:0,99,5268	0/0:11,0:11:33.11:0,33,2146
chr10	7226611	.	CAG	C	4416.16	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=11.554;DP=630;FS=2.912;HRun=0;HaplotypeScore=80.8346;InbreedingCoeff=0.9944;MQ=83.54;MQ0=0;MQRankSum=-0.991;QD=36.80;ReadPosRankSum=4.352;VQSLOD=7.0426;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,147,2708	0/0:9,0:9:27.09:0,27,503	0/0:25,0:23:60.11:0,60,950	0/0:32,0:30:63.32:0,63,993	0/0:12,0:12:33.11:0,33,617	0/0:17,0:17:51.14:0,51,871	0/0:29,0:29:84.29:0,84,1561	0/0:33,0:33:96.30:0,96,1721	0/0:24,0:24:69.24:0,69,1292	0/0:19,0:19:45.15:0,45,839	0/0:7,0:7:21.07:0,21,393	1/1:0,29:29:78.26:1148,78,0	1/1:1,16:17:33.11:486,33,0	1/1:1,26:27:69.23:1016,69,0	0/0:26,0:26:78.25:0,78,1429	0/0:14,0:14:39.13:0,39,722	0/0:29,0:29:87.30:0,87,1594	0/0:15,0:15:42.06:0,42,706	0/0:20,0:20:60.21:0,60,1105	0/0:9,0:9:21.06:0,21,362	0/0:60,0:60:99:0,175,3186	1/1:0,11:11:27.09:398,27,0	1/1:0,6:6:15.05:221,15,0	1/1:0,30:30:78.26:1148,78,0	0/0:13,0:13:30.10:0,30,553	0/0:31,0:31:87.30:0,87,1630	0/0:25,0:25:75.24:0,75,1362	0/0:11,0:11:33.11:0,33,608
chr10	7226916	.	T	TTTATTA	3341.69	PASS	AC=40;AF=1.000;AN=40;BaseQRankSum=0.653;DP=283;FS=0.000;HRun=0;HaplotypeScore=57.6656;InbreedingCoeff=-0.0831;MQ=64.37;MQ0=2;MQRankSum=0.937;QD=13.81;ReadPosRankSum=0.596;VQSLOD=2.1667;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:13:12:179,12,0	1/1:5,2:8:8.96:195,9,0	./.	./.	1/1:4,6:10:9.03:280,9,0	1/1:1,0:4:6.02:156,6,0	./.	1/1:34,0:34:39.08:520,39,0	./.	1/1:8,0:9:6.02:154,6,0	./.	1/1:6,0:7:2.94:18,3,0	1/1:2,0:7:7.82:53,8,0	1/1:4,0:5:2.94:18,3,0	1/1:2,0:3:2.94:18,3,0	1/1:8,0:8:5.78:33,6,0	1/1:14,0:26:18.06:469,18,0	1/1:24,0:24:6.02:146,6,0	1/1:13,2:14:6.47:122,6,0	1/1:6,3:9:6.02:193,6,0	1/1:4,0:7:5.88:37,6,0	./.	./.	./.	1/1:7,0:15:15.05:391,15,0	1/1:7,0:7:3.01:88,3,0	1/1:10,0:16:6.02:156,6,0	1/1:6,7:14:5.95:115,6,0
chr10	7226956	.	T	TTA	852.65	PASS	AB=0.991;AC=20;AF=0.370;AN=54;BaseQRankSum=8.536;DP=218;FS=3.769;HRun=0;HaplotypeScore=37.7089;InbreedingCoeff=-0.3203;MQ=70.43;MQ0=3;MQRankSum=-6.033;QD=4.93;ReadPosRankSum=1.643;VQSLOD=1.7028;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:12,1:13:99:137,0,300	1/1:3,0:3:8.90:113,9,0	0/0:9,0:6:9.03:0,9,124	0/0:4,0:2:5.98:0,6,59	0/1:7,0:7:66.45:68,0,66	0/1:6,0:6:22.50:22,0,109	./.	0/1:36,3:39:99:318,0,1001	0/0:4,0:4:9.03:0,9,124	0/1:6,0:6:56.79:57,0,148	0/0:4,0:4:12.04:0,12,166	0/1:4,0:4:2.64:3,0,113	0/1:8,0:8:25.12:25,0,91	0/1:5,0:5:2.63:3,0,113	0/0:6,0:6:0.37:0,0,151	0/1:4,0:4:16.17:23,0,16	0/1:14,0:14:76.56:77,0,192	0/1:17,0:17:5.45:5,0,286	0/0:8,0:7:3.43:0,3,195	0/1:7,0:7:14.15:14,0,163	1/1:3,0:3:5.75:29,6,0	0/0:3,0:3:6.02:0,6,83	0/0:2,0:2:6.01:0,6,66	0/0:5,0:5:15.05:0,15,207	0/1:15,0:15:54.59:55,0,274	0/1:6,0:6:30.68:31,0,189	0/1:6,0:6:19.47:19,0,148	0/1:10,0:10:2.17:2,0,301
chr10	7229576	.	G	GCACACACA	12385.84	PASS	AB=0.553;AC=44;AF=0.786;AN=56;BaseQRankSum=-1.302;DP=963;FS=7.293;HRun=0;HaplotypeScore=320.9243;InbreedingCoeff=0.6083;MQ=53.52;MQ0=7;MQRankSum=-5.821;QD=15.16;ReadPosRankSum=4.760;VQSLOD=1.9262;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,19:36:0.93:123,1,0	1/1:6,0:24:11.58:200,12,0	0/0:39,0:25:60.67:0,61,1352	0/0:47,0:37:68.59:0,69,1792	1/1:16,0:33:17.58:272,18,0	1/1:7,28:38:11.74:496,12,0	1/1:4,20:29:6.02:253,6,0	1/1:22,0:53:99:2129,111,0	1/1:6,37:48:14.85:415,15,0	1/1:13,0:39:84.27:1753,84,0	0/1:2,1:21:0:0,0,0	1/1:4,34:39:12.36:513,12,0	1/1:9,27:38:26.43:1077,26,0	1/1:10,32:47:8.48:382,8,0	1/1:9,0:52:2.56:64,3,0	1/1:6,33:39:11.47:419,11,0	1/1:2,16:20:18.06:648,18,0	1/1:5,0:18:21.03:330,21,0	1/1:8,7:17:33.11:926,33,0	0/1:4,22:31:0:0,0,0	1/1:38,0:63:9.18:93,9,0	0/1:1,22:27:0:0,0,0	0/0:6,30:38:0.01:0,0,0	0/1:13,16:29:0.27:0,0,1	0/0:3,16:21:0.18:0,0,1	1/1:10,0:27:45.15:919,45,0	1/1:6,0:30:23.98:525,24,0	1/1:1,0:18:39.13:846,39,0
chr10	7230210	.	A	AG	1604.94	PASS	AB=0.724;AC=15;AF=0.268;AN=56;BaseQRankSum=-4.623;DP=595;FS=1.047;HRun=2;HaplotypeScore=120.0506;InbreedingCoeff=0.6984;MQ=83.10;MQ0=1;MQRankSum=-3.593;QD=11.30;ReadPosRankSum=-4.915;VQSLOD=0.2090;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:57.93:0,58,306	1/1:3,2:5:5.54:69,6,0	0/0:19,0:19:51.01:0,51,580	0/0:28,0:28:62.93:0,63,825	0/0:10,0:10:20.37:0,20,119	0/0:15,0:15:24.59:0,25,135	0/0:25,0:25:24.74:0,25,217	0/0:13,0:13:20.74:0,21,109	0/0:25,0:25:55.46:0,55,296	1/1:9,9:18:16.25:171,16,0	0/1:4,4:8:5.96:62,0,6	0/0:26,1:27:51.19:0,51,279	0/0:22,0:22:46.63:0,47,260	0/1:13,1:14:14.35:14,0,110	1/1:14,11:25:27.58:417,28,0	0/0:33,0:33:49.56:0,50,351	0/0:36,0:36:71.77:0,72,475	1/1:7,14:21:10.06:363,10,0	0/0:15,0:15:3.27:0,3,122	0/0:11,0:11:20.20:0,20,130	0/0:43,0:42:80.45:0,80,420	0/0:27,0:27:40.48:0,40,211	0/0:23,0:23:21.81:0,22,204	0/0:28,0:27:74.12:0,74,384	0/0:19,0:19:31.97:0,32,164	1/1:10,6:16:12.01:122,12,0	1/1:17,10:27:40.16:542,40,0	0/1:2,6:8:7.15:30,0,7
chr10	7230360	.	GGTGT	G	1880.33	PASS	AB=0.958;AC=20;AF=0.385;AN=52;BaseQRankSum=-3.337;DP=607;FS=14.132;HRun=0;HaplotypeScore=120.5657;InbreedingCoeff=0.7619;MQ=62.55;MQ0=12;MQRankSum=1.308;QD=8.51;ReadPosRankSum=-0.201;VQSLOD=1.7195;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:29:9.03:0,9,160	1/1:4,2:6:6.02:94,6,0	./.	./.	1/1:11,8:19:12.51:189,13,0	0/0:16,0:16:21.07:0,21,392	0/0:17,0:26:26.83:0,27,475	0/1:29,0:29:17.80:44,0,18	0/0:21,0:26:33.11:0,33,654	1/1:9,4:14:18.05:246,18,0	1/1:6,7:13:2.89:47,3,0	0/0:20,0:21:27.09:0,27,439	0/0:16,0:16:18.06:0,18,290	0/0:20,0:20:12.51:0,13,204	1/1:21,8:30:26.82:371,27,0	0/0:16,0:35:54.17:0,54,962	0/0:15,0:25:39.58:0,40,693	0/1:10,1:11:7.95:41,0,8	0/0:9,0:11:9.03:0,9,176	0/0:11,0:15:15.05:0,15,313	1/1:26,6:31:15.93:238,16,0	0/0:14,0:14:24.08:0,24,426	0/0:18,0:16:14.83:0,15,237	0/0:34,0:34:56.22:0,56,871	0/0:14,0:17:27.08:0,27,517	1/1:21,5:26:13.33:213,13,0	1/1:16,11:26:20.18:310,20,0	1/1:7,6:13:18.06:283,18,0
chr10	7230371	.	G	GTA	2580.85	PASS	AB=0.934;AC=17;AF=0.304;AN=56;BaseQRankSum=-1.530;DP=621;FS=20.928;HRun=0;HaplotypeScore=104.4770;InbreedingCoeff=0.3579;MQ=58.46;MQ0=13;MQRankSum=2.761;QD=9.70;ReadPosRankSum=9.463;VQSLOD=0.9764;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:31:22.79:0,23,221	0/0:6,0:6:17.93:0,18,138	0/0:24,0:11:23.68:0,24,203	0/0:26,0:13:26.06:0,26,258	0/0:18,0:18:35.63:0,36,266	0/0:17,0:16:2.86:0,3,235	0/1:25,0:25:46.28:46,0,285	0/0:26,0:26:71.84:0,72,611	0/0:26,0:26:36.85:0,37,397	0/0:16,0:16:41.86:0,42,345	0/0:11,0:11:11.85:0,12,96	1/1:2,20:22:14.34:425,14,0	1/1:1,13:14:18.06:323,18,0	1/1:2,22:25:0.23:157,0,0	0/0:33,0:33:83.48:0,83,635	0/1:33,0:33:99:174,0,242	0/1:25,0:25:95.37:95,0,221	0/0:15,0:15:38.76:0,39,295	0/1:12,0:11:8.82:9,0,165	0/1:17,0:16:6.27:6,0,220	0/0:34,0:33:80.64:0,81,629	0/1:3,18:22:46.64:265,0,47	1/1:2,17:18:14.91:288,15,0	1/1:1,29:32:44.08:965,44,0	0/1:19,0:18:4.09:4,0,274	0/0:28,0:28:77.76:0,78,642	0/0:30,0:28:69.10:0,69,513	0/0:13,0:13:38.82:0,39,293
chr10	7231488	.	AAGGGAGGGGAGAGGAGAGAGG	A	2177.22	PASS	AB=0.993;AC=14;AF=0.250;AN=56;BaseQRankSum=6.909;DP=691;FS=0.878;HRun=0;HaplotypeScore=317.3610;InbreedingCoeff=0.6986;MQ=62.89;MQ0=11;MQRankSum=-4.182;QD=9.43;ReadPosRankSum=0.085;VQSLOD=1.9685;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:45.14:0,45,2342	0/0:6,0:6:12.04:0,12,656	0/0:54,0:27:26.23:0,26,502	0/1:74,0:22:20.83:21,0,136	0/0:18,0:18:30.10:0,30,1648	0/0:16,0:16:33.11:0,33,1865	0/0:35,0:36:57.13:0,57,2485	0/1:17,0:16:47.11:47,0,165	0/0:28,0:28:60.19:0,60,3170	0/0:23,0:23:45.15:0,45,2226	0/0:9,0:9:16.30:0,16,1152	1/1:12,18:30:10.79:493,11,0	1/1:10,12:22:12.04:640,12,0	1/1:10,16:26:9.03:501,9,0	0/0:28,0:28:66.21:0,66,3593	0/0:26,0:25:51.17:0,51,2750	0/0:32,0:31:66.22:0,66,4524	0/0:25,0:25:42.14:0,42,2611	0/0:15,0:15:21.07:0,21,1258	0/0:16,0:16:27.09:0,27,1472	0/0:39,0:40:87.30:0,87,4300	1/1:9,8:17:5.98:96,6,0	1/1:6,10:16:11.95:385,12,0	1/1:10,18:28:3.01:167,3,0	0/0:12,0:12:15.05:0,15,919	0/0:24,0:24:45.15:0,45,1957	0/0:19,0:19:42.14:0,42,2655	0/0:8,0:8:9.03:0,9,506
chr10	7232296	.	C	CTGGGTAGTG	57469.12	PASS	AB=0.733;AC=51;AF=0.911;AN=56;BaseQRankSum=-5.477;DP=617;FS=7.144;HRun=0;HaplotypeScore=179.8788;InbreedingCoeff=0.8512;MQ=60.09;MQ0=2;MQRankSum=-7.917;QD=96.91;ReadPosRankSum=3.706;VQSLOD=4.6729;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,23:40:93.32:4286,93,0	1/1:3,3:5:9.03:432,9,0	0/0:15,0:15:44.88:0,45,1027	0/0:9,0:8:20.81:0,21,497	0/1:7,1:11:0:0,0,0	1/1:9,18:28:75.26:3551,75,0	1/1:15,12:30:66.23:2891,66,0	1/1:19,3:22:57.19:2173,57,0	1/1:9,21:31:78.27:3642,78,0	1/1:7,13:21:60.21:2668,60,0	1/1:2,6:9:12.04:576,12,0	1/1:10,19:33:81.75:3697,82,0	1/1:9,22:34:84.29:3826,84,0	1/1:10,19:32:84.29:3802,84,0	1/1:5,16:23:54.18:2545,54,0	1/1:7,13:22:54.19:2504,54,0	1/1:16,11:33:66.18:2534,66,0	1/1:6,13:20:54.19:2490,54,0	1/1:14,12:31:78.24:2921,78,0	1/1:6,4:13:15.05:569,15,0	1/1:17,15:37:45.15:2004,45,0	1/1:5,6:12:15.05:709,15,0	1/1:3,5:8:15.05:641,15,0	1/1:7,13:24:26.91:1294,27,0	1/1:7,9:19:39.13:1752,39,0	1/1:13,8:23:57.18:2228,57,0	1/1:8,16:27:72.25:3329,72,0	1/1:1,2:3:9.03:406,9,0
chr10	7236661	.	GA	G	2188.57	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=9.824;DP=642;FS=3.792;HRun=9;HaplotypeScore=66.2659;InbreedingCoeff=0.9691;MQ=60.88;MQ0=1;MQRankSum=-0.134;QD=23.53;ReadPosRankSum=2.191;VQSLOD=4.7290;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,40:40:99:1071,117,0	0/0:8,0:8:24.07:0,24,277	0/0:26,0:24:43.52:0,44,454	0/0:26,0:22:46.71:0,47,440	0/0:21,0:21:60.17:0,60,682	0/0:21,0:21:51.14:0,51,580	0/0:31,0:31:84.25:0,84,969	0/0:25,0:25:57.17:0,57,656	0/0:20,0:20:48.13:0,48,543	0/0:35,0:35:90.27:0,90,1039	0/0:21,0:21:57.64:0,58,656	0/0:30,0:30:84.25:0,84,966	0/0:18,0:18:54.14:0,54,611	0/0:16,0:16:39.59:0,40,451	0/0:26,0:26:69.19:0,69,786	0/0:11,0:11:30.09:0,30,346	0/0:28,0:28:75.22:0,75,866	0/0:32,0:32:84.25:0,84,969	0/0:24,0:24:56.99:0,57,629	0/0:17,0:17:39.06:0,39,427	0/0:34,0:34:99:0,99,1129	0/0:26,0:26:66.18:0,66,750	0/0:13,0:13:33.08:0,33,369	0/0:28,0:28:75.22:0,75,866	0/0:11,1:12:5.99:0,6,307	1/1:4,20:24:28.40:509,28,0	1/1:0,21:21:63.03:576,63,0	1/1:0,8:8:21.01:192,21,0
chr10	7238835	.	C	CCAT	4032.38	PASS	AB=0.545;AC=15;AF=0.268;AN=56;BaseQRankSum=-9.970;DP=681;FS=1.567;HRun=0;HaplotypeScore=83.3337;InbreedingCoeff=0.9036;MQ=61.32;MQ0=10;MQRankSum=2.092;QD=20.89;ReadPosRankSum=0.524;VQSLOD=3.2337;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:33:63.06:0,63,757	0/0:8,0:8:21.07:0,21,298	0/0:20,0:11:18.83:0,19,209	0/0:24,0:15:15.03:0,15,166	0/0:25,0:24:60.13:0,60,761	1/1:3,16:20:30.10:607,30,0	1/1:9,25:35:24.08:486,24,0	0/0:36,0:34:62.96:0,63,629	1/1:4,20:25:30.88:665,31,0	0/0:19,0:19:42.13:0,42,583	0/0:21,0:20:44.98:0,45,483	0/0:27,0:27:60.13:0,60,763	0/0:23,0:23:60.12:0,60,744	0/0:21,0:21:42.10:0,42,555	0/0:25,0:25:63.15:0,63,819	1/1:5,22:27:33.11:668,33,0	1/1:5,22:27:30.10:607,30,0	0/0:34,0:34:76.43:0,76,994	1/1:13,11:20:29.99:407,30,0	0/1:2,9:12:21.80:167,0,22	0/0:36,0:36:84.18:0,84,1072	0/0:13,0:13:36.09:0,36,464	0/0:21,0:21:51.12:0,51,644	0/0:38,0:38:48.66:0,49,1019	1/1:4,19:23:21.07:425,21,0	0/0:22,0:22:57.02:0,57,713	0/0:26,0:26:54.14:0,54,714	0/0:14,0:14:42.14:0,42,598
chr10	7239447	.	GCAGGGGTGAC	G	3515.72	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.859;DP=666;FS=1.297;HRun=0;HaplotypeScore=193.4498;InbreedingCoeff=0.9981;MQ=84.81;MQ0=0;MQRankSum=-8.636;QD=74.80;ReadPosRankSum=2.136;VQSLOD=3.8407;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,144,7529	0/0:11,0:11:33.11:0,33,1760	0/0:29,0:29:63.75:0,64,3129	0/0:23,0:23:63.19:0,63,2935	0/0:26,0:26:72.25:0,72,3694	0/0:21,0:21:63.22:0,63,3393	0/0:27,0:27:78.24:0,78,3780	0/0:29,0:29:81.27:0,81,3822	0/0:18,0:18:54.17:0,54,2686	0/0:27,0:27:81.28:0,81,4151	0/0:16,0:16:42.14:0,42,2065	0/0:28,0:28:81.28:0,81,3874	0/0:31,0:31:93.32:0,93,4920	0/0:19,0:19:57.20:0,57,2921	0/0:24,0:24:72.25:0,72,3552	0/0:25,0:25:75.26:0,75,3744	0/0:35,0:35:99:0,105,5418	0/0:29,0:29:87.27:0,87,4290	0/0:20,0:20:60.21:0,60,3082	0/0:23,0:23:66.23:0,66,3322	0/0:27,0:27:72.25:0,72,3557	0/0:22,0:22:63.19:0,63,3092	0/0:17,0:17:48.15:0,48,2368	0/0:28,0:28:81.23:0,81,4145	0/0:16,0:16:48.16:0,48,2537	1/1:1,24:25:62.62:1889,63,0	1/1:2,10:12:27.09:915,27,0	1/1:0,10:10:21.07:712,21,0
chr10	7239720	.	G	GGAGC	11414.12	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-12.036;DP=721;FS=0.707;HRun=0;HaplotypeScore=117.6506;InbreedingCoeff=0.9992;MQ=86.85;MQ0=1;MQRankSum=-7.297;QD=61.04;ReadPosRankSum=-0.827;VQSLOD=6.4879;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,138,2508	1/1:0,8:8:21.07:559,21,0	0/0:32,0:31:78.27:0,78,1406	0/0:25,0:25:60.19:0,60,1059	1/1:6,22:28:60.21:1584,60,0	0/0:25,0:25:69.19:0,69,1252	0/0:33,0:33:81.25:0,81,1448	1/1:10,14:25:57.19:1434,57,0	0/0:22,0:22:60.20:0,60,1090	1/1:5,15:20:51.17:1253,51,0	1/1:4,17:22:51.18:1344,51,0	0/0:36,0:36:99:0,102,1902	0/0:27,0:27:78.25:0,78,1421	0/0:22,0:22:63.22:0,63,1176	1/1:3,21:25:63.22:1673,63,0	0/0:33,0:33:96.33:0,96,1792	0/0:37,0:37:93.32:0,93,1736	1/1:1,25:26:66.23:1734,66,0	0/0:22,0:22:60.17:0,60,1090	0/0:22,0:22:63.19:0,63,1105	1/1:2,28:31:69.22:1834,69,0	0/0:22,0:22:66.23:0,66,1231	0/0:18,0:18:45.15:0,45,840	0/0:28,0:28:66.17:0,66,1164	0/0:27,0:27:81.26:0,81,1460	0/0:22,0:22:57.20:0,57,1064	0/0:20,0:18:60.06:0,60,1038	0/0:10,0:10:30.10:0,30,559
chr10	7243471	.	GGGGGC	G	1638.94	PASS	AB=0.843;AC=35;AF=0.700;AN=50;BaseQRankSum=-3.151;DP=311;FS=2.428;HRun=0;HaplotypeScore=55.6405;InbreedingCoeff=0.0387;MQ=66.40;MQ0=30;MQRankSum=0.886;QD=6.86;ReadPosRankSum=2.603;VQSLOD=1.5136;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:17:2.85:71,3,0	0/0:4,1:4:0:0,0,0	0/0:26,0:13:13.27:0,13,187	0/1:33,0:11:2.92:3,0,22	1/1:2,5:6:0.44:1,0,0	./.	1/1:18,3:18:10.33:168,10,0	1/1:4,13:16:28.47:468,28,0	0/1:13,7:15:24.44:50,0,24	1/1:9,2:10:17.64:203,18,0	1/1:3,7:10:0.43:1,0,0	1/1:7,0:7:8.72:61,9,0	1/1:4,0:4:5.78:37,6,0	0/1:8,0:8:14.17:31,0,14	./.	0/1:6,10:14:76.22:154,0,76	1/1:6,0:3:1.26:18,1,0	1/1:11,1:9:3.55:172,4,0	1/1:1,3:3:9:130,9,0	./.	0/1:13,3:12:8.70:73,0,9	0/0:1,0:1:0.89:0,1,2	1/1:3,0:3:2.94:18,3,0	0/0:17,0:16:0.06:0,0,23	0/1:7,5:9:11.15:38,0,11	0/1:5,0:4:13.65:20,0,14	1/1:5,0:5:2.97:23,3,0	1/1:5,0:4:3:28,3,0
chr10	7243472	.	GGGGC	G	1192.08	PASS	AB=0.991;AC=38;AF=0.792;AN=48;BaseQRankSum=-3.400;DP=306;FS=4.494;HRun=0;HaplotypeScore=53.3850;InbreedingCoeff=0.1637;MQ=63.24;MQ0=30;MQRankSum=0.544;QD=4.69;ReadPosRankSum=0.803;VQSLOD=0.8042;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:18,1:19:3.92:47,4,0	./.	0/0:26,0:12:11.95:0,12,147	0/1:32,0:10:1.67:2,0,23	1/1:7,0:6:0.46:1,0,0	./.	1/1:19,1:17:1.80:61,2,0	1/1:17,0:16:29.49:278,29,0	0/1:18,0:13:7.29:24,0,7	1/1:10,0:9:5.71:101,6,0	0/1:9,0:9:0.02:0,0,0	1/1:6,0:6:8.93:111,9,0	1/1:4,0:4:5.71:32,6,0	1/1:7,1:8:8.29:43,8,0	./.	0/1:16,0:14:42.96:78,0,43	1/1:7,0:4:5.20:38,5,0	1/1:12,0:9:7.30:127,7,0	1/1:4,0:3:8.99:79,9,0	./.	1/1:17,1:14:11.60:99,12,0	0/0:1,0:1:0.47:0,0,1	1/1:3,0:3:3.01:47,3,0	0/1:16,1:16:4.09:7,0,4	0/1:11,0:8:1.35:39,0,1	1/1:6,0:5:3.38:27,3,0	1/1:4,1:5:2.90:16,3,0	1/1:4,1:4:3.90:52,4,0
chr10	7243473	.	GGGC	G	1478.51	PASS	AB=1.000;AC=39;AF=0.848;AN=46;BaseQRankSum=-3.724;DP=294;FS=3.773;HRun=0;HaplotypeScore=48.9364;InbreedingCoeff=0.2547;MQ=60.32;MQ0=30;MQRankSum=1.241;QD=6.91;ReadPosRankSum=-0.517;VQSLOD=1.6661;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:18:4.96:50,5,0	./.	0/0:24,0:10:6.75:0,7,116	0/0:32,0:10:1.92:0,2,26	1/1:7,0:6:0.47:1,0,0	./.	1/1:19,1:17:4.59:87,5,0	1/1:16,0:15:30.65:311,31,0	0/1:15,0:10:4.74:33,0,5	1/1:11,0:10:17.76:167,18,0	0/1:9,0:9:0:0,0,0	1/1:6,0:6:8.93:64,9,0	1/1:2,1:3:5.92:63,6,0	1/1:8,0:8:8.70:66,9,0	./.	0/1:15,0:13:9.39:116,0,9	1/1:7,0:4:5.93:40,6,0	1/1:12,0:9:15.36:154,15,0	1/1:4,0:3:8.99:83,9,0	./.	1/1:17,0:13:14.83:125,15,0	./.	1/1:1,0:3:3:27,3,0	1/1:16,1:16:5.37:36,5,0	1/1:11,0:8:3.47:29,3,0	1/1:6,0:5:6.46:49,6,0	1/1:2,2:4:3.01:43,3,0	1/1:5,0:4:5.94:43,6,0
chr10	7243475	.	GC	G	1105.13	PASS	AB=0.940;AC=44;AF=0.880;AN=50;BaseQRankSum=-2.417;DP=276;FS=0.000;HRun=1;HaplotypeScore=43.7452;InbreedingCoeff=0.3400;MQ=55.59;MQ0=30;MQRankSum=0.696;QD=4.74;ReadPosRankSum=-0.336;VQSLOD=0.1015;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:17,1:18:7.95:45,8,0	./.	0/1:19,1:8:2.64:3,0,71	0/0:29,0:8:1.59:0,2,27	0/1:7,0:6:0:0,0,0	./.	1/1:18,1:16:12.82:59,13,0	1/1:14,1:14:27.26:171,27,0	1/1:14,0:9:4.94:26,5,0	1/1:10,1:10:17.75:157,18,0	0/1:8,1:9:0:0,0,0	1/1:6,0:6:8.71:49,9,0	1/1:2,1:3:5.94:41,6,0	1/1:6,0:6:8.86:64,9,0	0/1:9,1:7:0:0,0,0	1/1:15,0:13:13.53:86,14,0	1/1:6,1:4:6.82:41,7,0	1/1:7,4:8:16.63:94,17,0	1/1:4,0:3:8.40:48,8,0	./.	1/1:13,4:13:14.92:114,15,0	1/1:1,0:1:0.89:2,1,0	1/1:2,0:2:2.84:14,3,0	1/1:12,2:13:8.41:38,8,0	1/1:10,0:7:5.93:43,6,0	1/1:0,5:4:5.99:49,6,0	1/1:4,0:4:3:25,3,0	1/1:5,0:4:5.84:34,6,0
chr10	7243477	.	G	GAGA	1003.99	PASS	AB=0.943;AC=33;AF=0.688;AN=48;BaseQRankSum=-2.725;DP=323;FS=16.783;HRun=0;HaplotypeScore=68.9982;InbreedingCoeff=0.0313;MQ=50.64;MQ0=30;MQRankSum=-0.446;QD=3.91;ReadPosRankSum=0.310;VQSLOD=0.0538;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:23:3.26:14,3,0	./.	0/0:18,0:6:6.46:0,6,101	0/0:30,0:8:3.04:0,3,31	0/1:7,0:7:0:0,0,0	0/1:10,0:9:0:1,0,0	1/1:9,7:16:11.93:168,12,0	1/1:20,0:19:24.84:133,25,0	1/1:9,0:10:5.92:61,6,0	1/1:7,0:12:5.58:196,6,0	0/1:11,0:11:0:0,0,0	0/1:7,0:7:7.26:7,0,27	0/1:4,0:4:14.29:14,0,26	0/1:8,0:8:19.40:19,0,51	./.	1/1:16,0:16:12.79:70,13,0	1/1:6,0:5:4.82:65,5,0	0/1:12,0:10:1.13:116,0,1	1/1:11,0:10:13.14:135,13,0	./.	0/1:18,0:16:34.80:35,0,38	./.	1/1:3,0:3:2.60:10,3,0	0/1:14,0:13:26.99:34,0,27	0/1:8,0:8:5.78:6,0,19	0/1:9,0:8:8.08:8,0,15	1/1:3,0:3:3:25,3,0	1/1:7,0:6:5.54:17,6,0
chr10	7243478	.	GAGAGA	G	207.63	PASS	AB=1.000;AC=13;AF=0.295;AN=44;BaseQRankSum=2.239;DP=337;FS=0.000;HRun=0;HaplotypeScore=60.6560;InbreedingCoeff=0.3068;MQ=46.17;MQ0=30;MQRankSum=-3.972;QD=3.40;ReadPosRankSum=2.139;VQSLOD=0.9318;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:15,7:22:1.43:0,1,4	./.	0/0:17,0:5:7.57:0,8,92	0/0:28,0:7:2.64:0,3,15	./.	0/0:14,0:11:0:0,0,0	0/0:19,0:16:3.87:0,4,95	0/0:22,0:21:10.08:0,10,127	0/0:15,0:10:0.87:0,1,69	0/1:14,0:13:13.93:14,0,211	./.	1/1:3,4:7:0.18:51,0,0	1/1:3,1:4:1.76:54,2,0	1/1:4,1:8:8.70:115,9,0	./.	0/0:20,0:18:3.52:0,4,125	0/0:8,0:5:2.37:0,2,29	0/0:13,0:10:4.46:0,4,174	0/0:15,0:14:11.18:0,11,202	./.	0/0:20,0:16:14.08:0,14,187	./.	1/1:3,0:3:2.97:20,3,0	1/1:11,3:13:5.48:68,5,0	0/0:11,0:8:2.80:0,3,7	0/0:12,0:11:10.59:0,11,146	0/1:4,0:4:1.71:3,0,2	0/1:7,0:6:1.42:1,0,50
chr10	7243954	.	T	TTTA	1317.68	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-7.219;DP=464;FS=8.082;HRun=0;HaplotypeScore=60.0821;InbreedingCoeff=0.8661;MQ=73.98;MQ0=0;MQRankSum=0.849;QD=25.84;ReadPosRankSum=1.562;VQSLOD=2.6472;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:81.24:0,81,1116	0/0:6,0:6:15.05:0,15,216	0/0:8,0:8:12.04:0,12,161	0/0:13,0:13:5.45:0,5,65	0/0:15,0:15:36.04:0,36,441	0/0:20,0:20:48.16:0,48,691	0/0:15,0:15:30.10:0,30,430	0/0:33,0:33:69.15:0,69,839	0/0:14,0:14:30.09:0,30,415	0/0:16,0:16:42.13:0,42,576	0/0:18,0:18:45.07:0,45,556	0/0:18,0:18:42.13:0,42,573	0/0:11,0:11:30.08:0,30,398	0/0:19,0:19:48.15:0,48,674	0/0:16,0:16:39.11:0,39,527	0/0:13,0:13:27.05:0,27,321	0/0:33,0:33:72.15:0,72,927	0/0:23,0:23:45.10:0,45,588	0/0:22,0:22:48.15:0,48,660	0/0:19,0:19:48.09:0,48,616	0/0:4,0:4:3:0,3,27	0/0:7,0:7:12.02:0,12,139	0/0:4,0:4:12.03:0,12,154	0/0:12,0:12:24.07:0,24,329	0/0:20,0:20:48.13:0,48,639	1/1:5,13:18:39.11:670,39,0	1/1:7,12:19:18.06:363,18,0	1/1:4,9:14:21.07:424,21,0
chr10	7245249	.	ATATATATATATTTT	A	31639.47	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-0.872;DP=536;FS=10.379;HRun=0;HaplotypeScore=226.9472;InbreedingCoeff=0.8193;MQ=55.68;MQ0=3;MQRankSum=-2.556;QD=63.03;ReadPosRankSum=4.634;VQSLOD=2.7513;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,27:35:63.22:2640,63,0	1/1:0,17:17:30.10:1104,30,0	0/0:10,0:1:2.98:0,3,21	0/0:24,0:14:22.24:0,22,291	1/1:2,19:21:42.05:1307,42,0	1/1:1,17:18:36.12:1551,36,0	1/1:0,20:20:39.13:1606,39,0	1/1:3,27:30:81.24:2111,81,0	1/1:3,15:18:27.09:1163,27,0	1/1:6,16:22:44.73:1317,45,0	1/1:3,15:18:12:441,12,0	1/1:2,19:21:33.11:1421,33,0	1/1:1,11:12:17.87:775,18,0	1/1:2,12:14:15.05:573,15,0	1/1:2,21:23:36.38:1478,36,0	1/1:2,19:21:24.13:1159,24,0	1/1:3,17:20:18.06:776,18,0	1/1:3,11:14:21.07:812,21,0	1/1:6,11:17:33.10:819,33,0	1/1:5,25:30:51.14:2124,51,0	1/1:4,9:13:9.02:291,9,0	1/1:3,11:14:21.06:903,21,0	1/1:4,17:21:29.66:1099,30,0	1/1:4,11:15:11.56:366,12,0	1/1:1,14:15:27.09:996,27,0	1/1:1,15:16:45.15:1577,45,0	1/1:1,23:24:51.17:2195,51,0	1/1:1,12:13:24.08:1034,24,0
chr10	7247455	.	GTTGT	G	14600.69	PASS	AB=0.606;AC=51;AF=0.911;AN=56;BaseQRankSum=3.577;DP=554;FS=14.380;HRun=0;HaplotypeScore=118.1777;InbreedingCoeff=0.7480;MQ=60.61;MQ0=1;MQRankSum=-5.450;QD=29.50;ReadPosRankSum=6.493;VQSLOD=3.8047;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,23:32:54.06:786,54,0	1/1:3,6:9:15.05:251,15,0	0/0:27,0:21:25.90:0,26,466	0/0:32,0:31:43.94:0,44,827	1/1:3,24:27:56.98:801,57,0	1/1:5,12:17:30.10:501,30,0	1/1:1,16:17:24:341,24,0	1/1:6,6:12:18.05:249,18,0	1/1:4,8:12:21.04:321,21,0	1/1:3,16:20:48.12:759,48,0	1/1:2,11:13:29.95:369,30,0	1/1:4,20:23:51.05:762,51,0	1/1:1,15:16:39.10:622,39,0	1/1:2,13:15:32.94:515,33,0	1/1:5,15:20:41.99:583,42,0	1/1:3,13:16:39.01:562,39,0	1/1:8,21:29:57.09:865,57,0	0/1:7,13:19:19.33:466,0,19	1/1:8,11:19:33.11:552,33,0	1/1:3,13:16:36.05:542,36,0	1/1:5,9:14:24:341,24,0	1/1:1,13:13:33.08:522,33,0	1/1:4,26:30:62.79:950,63,0	1/1:3,25:28:57.07:861,57,0	1/1:4,12:16:30.10:501,30,0	1/1:4,25:29:75.24:1185,75,0	1/1:3,13:16:17.99:242,18,0	1/1:1,13:14:9.03:150,9,0
chr10	7247532	.	A	ATGAAGATGACCCCGAGCTTC	22865.27	PASS	AB=0.801;AC=54;AF=0.964;AN=56;BaseQRankSum=2.546;DP=213;FS=71.540;HRun=0;HaplotypeScore=231.6075;InbreedingCoeff=0.0333;MQ=64.47;MQ0=0;MQRankSum=-3.706;QD=107.35;ReadPosRankSum=2.843;VQSLOD=1.9328;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,0:10:24.07:1369,24,0	1/1:6,0:6:3.01:157,3,0	0/1:5,1:8:99:703,0,124	0/1:6,1:7:21.21:891,0,21	1/1:8,0:8:6.02:313,6,0	1/1:12,0:12:25.33:1395,25,0	1/1:10,0:10:27.09:1330,27,0	1/1:14,0:14:42.13:2394,42,0	1/1:6,0:6:12.04:930,12,0	1/1:7,0:7:17.96:535,18,0	1/1:3,0:3:6.02:109,6,0	1/1:10,0:9:15.05:791,15,0	1/1:6,0:6:15.05:996,15,0	1/1:4,0:4:0.89:2,1,0	1/1:10,0:10:17.18:1232,17,0	1/1:11,0:11:19.30:922,19,0	1/1:11,0:11:24.08:1344,24,0	1/1:4,0:3:6.02:118,6,0	1/1:3,0:3:9.02:171,9,0	1/1:5,0:5:15.05:750,15,0	1/1:3,0:3:6.02:379,6,0	1/1:7,0:6:18.06:1562,18,0	1/1:8,0:8:18.06:811,18,0	1/1:12,0:12:14.97:452,15,0	1/1:7,0:7:18.06:1152,18,0	1/1:5,0:5:12.04:468,12,0	1/1:11,0:11:25.04:785,25,0	1/1:5,0:5:12.02:805,12,0
chr10	7297580	.	G	GT	10833.86	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-6.555;DP=583;FS=2.976;HRun=6;HaplotypeScore=103.7912;InbreedingCoeff=0.9987;MQ=88.36;MQ0=1;MQRankSum=-4.067;QD=30.60;ReadPosRankSum=2.580;VQSLOD=4.6812;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:50:99:0,135,1345	1/1:2,10:12:24.08:302,24,0	0/0:25,0:25:69.14:0,69,692	0/0:38,0:38:75.13:0,75,749	1/1:3,14:17:36.07:434,36,0	1/1:2,11:13:27.05:323,27,0	1/1:3,20:23:60.15:737,60,0	1/1:6,21:27:60.14:709,60,0	1/1:2,20:22:57.18:717,57,0	1/1:4,15:19:48.14:591,48,0	1/1:2,21:23:60.19:746,60,0	0/0:13,0:13:36.03:0,36,354	0/0:12,0:12:30:0,30,293	0/0:22,0:22:60.06:0,60,598	1/1:1,16:17:45.10:548,45,0	1/1:0,17:17:48.15:602,48,0	1/1:1,19:20:51.16:641,51,0	1/1:1,14:15:36.08:436,36,0	1/1:10,17:27:69.13:803,69,0	1/1:5,19:24:60.12:720,60,0	1/1:1,16:17:45.10:548,45,0	0/0:23,0:23:42.08:0,42,428	0/0:17,0:17:42.08:0,42,421	0/0:28,0:28:69.15:0,69,703	1/1:0,18:18:48.07:566,48,0	1/1:2,21:23:57.18:716,57,0	1/1:0,13:13:36.07:433,36,0	1/1:0,7:7:21.07:264,21,0
chr10	7297687	.	AACTC	A	5035.79	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=10.486;DP=657;FS=0.000;HRun=0;HaplotypeScore=114.4235;InbreedingCoeff=0.9928;MQ=78.59;MQ0=0;MQRankSum=-4.189;QD=43.79;ReadPosRankSum=3.329;VQSLOD=5.2246;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:56:99:0,154,3976	0/0:9,0:9:12.04:0,12,320	0/0:24,0:24:72.25:0,72,1851	0/0:29,0:29:72.24:0,72,1806	0/0:27,0:27:63.22:0,63,1604	0/0:20,0:20:60.21:0,60,1599	0/0:28,0:28:81.28:0,81,2089	0/0:33,0:33:93.32:0,93,2445	0/0:23,0:23:66.23:0,66,1727	0/0:19,0:19:57.20:0,57,1486	0/0:17,0:17:51.13:0,51,1293	1/1:2,27:29:75.26:1399,75,0	1/1:3,11:14:24.08:448,24,0	1/1:0,24:24:66.23:1231,66,0	0/0:26,0:26:75.26:0,75,1985	0/0:14,0:14:42.14:0,42,1118	0/0:33,0:33:96.33:0,96,2527	0/0:21,0:21:60.21:0,60,1583	0/0:24,0:24:69.24:0,69,1736	0/0:17,0:17:48.16:0,48,1205	0/0:41,0:41:99:0,117,3106	1/1:2,17:19:48.16:893,48,0	1/1:2,10:12:30.10:560,30,0	1/1:4,13:17:27.09:504,27,0	0/0:16,0:16:45.15:0,45,1156	0/0:28,0:28:81.28:0,81,2156	0/0:27,0:26:72.25:0,72,1914	0/0:10,0:10:27.09:0,27,712
chr10	7299852	.	G	GT	6190.47	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-13.775;DP=769;FS=0.694;HRun=2;HaplotypeScore=94.1052;InbreedingCoeff=0.9999;MQ=87.33;MQ0=0;MQRankSum=-2.188;QD=38.45;ReadPosRankSum=2.858;VQSLOD=5.1499;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,153,1876	0/0:12,0:12:36.08:0,36,430	0/0:33,0:33:87.21:0,87,1014	0/0:24,0:24:60.18:0,60,731	0/0:27,0:27:69.13:0,69,815	0/0:15,0:15:45.12:0,45,543	0/0:28,0:28:84.25:0,84,1028	0/0:35,0:35:93.26:0,93,1117	0/0:22,0:22:63.20:0,63,781	0/0:32,0:32:96.29:0,96,1169	0/0:14,0:14:35.99:0,36,394	1/1:2,26:28:75.25:1078,75,0	1/1:0,21:21:57.19:821,57,0	1/1:2,26:28:72.24:1036,72,0	0/0:28,0:28:84.26:0,84,1040	0/0:23,0:23:66.21:0,66,818	0/0:23,0:23:66.01:0,66,791	0/0:16,0:16:48.15:0,48,591	0/0:24,0:24:66.19:0,66,795	0/0:27,0:27:72.18:0,72,863	0/0:44,0:44:99:0,120,1476	1/1:2,28:30:78.26:1121,78,0	1/1:0,28:28:72.19:1010,72,0	1/1:0,26:26:78.26:1123,78,0	0/0:30,0:30:84.26:0,84,1040	0/0:43,0:43:99:0,120,1474	0/0:40,0:40:99:0,117,1436	0/0:13,0:13:39.10:0,39,467
chr10	7300157	.	T	TA	2762.15	PASS	AB=0.750;AC=42;AF=0.955;AN=44;BaseQRankSum=-3.189;DP=295;FS=7.692;HRun=3;HaplotypeScore=75.2760;InbreedingCoeff=-0.1221;MQ=63.56;MQ0=1;MQRankSum=-3.086;QD=11.65;ReadPosRankSum=1.282;VQSLOD=1.4475;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	1/1:1,5:6:3.01:37,3,0	0/1:4,3:7:27.31:106,0,27	0/1:6,2:8:3.18:36,0,3	1/1:6,12:18:3.86:23,4,0	1/1:4,7:11:5.96:45,6,0	./.	1/1:4,11:15:39.13:524,39,0	1/1:4,10:14:3.01:38,3,0	1/1:1,16:16:45.15:587,45,0	1/1:6,7:13:8.90:59,9,0	1/1:2,10:12:8.91:61,9,0	1/1:3,10:13:11.95:117,12,0	1/1:3,8:11:5.98:55,6,0	./.	1/1:1,13:14:8.94:77,9,0	1/1:2,3:5:5.98:60,6,0	1/1:0,2:2:6.02:81,6,0	1/1:4,4:8:15.05:198,15,0	1/1:4,12:16:6.02:75,6,0	1/1:5,0:5:3.01:38,3,0	1/1:3,14:17:3:25,3,0	./.	./.	./.	1/1:3,6:9:24.08:308,24,0	1/1:2,7:9:8.99:99,9,0	1/1:4,3:7:15.05:204,15,0
chr10	7304195	.	AT	A	1957.92	PASS	AB=0.667;AC=11;AF=0.212;AN=52;BaseQRankSum=9.022;DP=525;FS=1.169;HRun=6;HaplotypeScore=55.5859;InbreedingCoeff=0.8798;MQ=38.97;MQ0=88;MQRankSum=-3.604;QD=19.01;ReadPosRankSum=0.854;VQSLOD=3.1645;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,1:28:75.22:0,75,963	0/0:11,0:11:30.10:0,30,395	./.	./.	0/0:23,0:18:54.17:0,54,703	0/0:34,0:26:60.20:0,60,788	0/0:11,0:11:33.11:0,33,431	0/0:23,0:21:54.14:0,54,690	0/0:19,0:15:39.08:0,39,491	0/0:19,0:16:45.15:0,45,587	0/0:18,0:16:39.05:0,39,471	1/1:6,9:10:24.02:245,24,0	1/1:2,15:15:39.03:403,39,0	1/1:5,15:16:42.10:451,42,0	0/0:24,0:20:50.95:0,51,639	0/0:19,0:16:48.16:0,48,629	0/0:22,0:16:48.13:0,48,610	0/0:16,0:11:30.07:0,30,394	0/0:20,0:8:21.03:0,21,255	0/0:27,0:24:66.09:0,66,801	0/0:12,0:8:24.08:0,24,315	1/1:0,19:19:45.05:468,45,0	1/1:6,18:21:44.96:453,45,0	0/1:4,4:5:24.44:112,0,24	0/0:17,0:17:51.17:0,51,669	0/0:22,0:17:48.08:0,48,592	0/0:37,0:29:84.19:0,84,1059	0/0:7,0:5:15.01:0,15,179
chr10	7304542	.	AT	A	8127.72	PASS	AB=1.000;AC=47;AF=0.839;AN=56;BaseQRankSum=5.340;DP=706;FS=7.524;HRun=7;HaplotypeScore=117.5707;InbreedingCoeff=0.3393;MQ=75.79;MQ0=0;MQRankSum=-6.375;QD=12.26;ReadPosRankSum=9.678;VQSLOD=1.9965;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:34,0:34:47.31:263,47,0	1/1:16,0:16:20.28:147,20,0	0/0:21,0:20:49.57:0,50,532	0/0:22,0:21:25.64:0,26,455	1/1:28,0:28:47.61:244,48,0	0/1:20,0:20:2.76:133,0,3	0/1:16,0:16:8.92:85,0,9	0/1:31,0:31:10.01:127,0,10	0/1:27,0:27:10.80:162,0,11	1/1:28,0:28:8.12:137,8,0	1/1:27,0:27:19.57:171,20,0	1/1:3,25:28:75.17:764,75,0	1/1:1,27:28:72.16:734,72,0	1/1:0,23:23:60.14:612,60,0	1/1:28,0:28:44.04:239,44,0	0/1:24,0:24:43.07:149,0,43	1/1:19,0:19:15.22:131,15,0	1/1:10,0:10:23.29:89,23,0	1/1:13,0:13:1.66:63,2,0	1/1:26,0:26:44.94:262,45,0	1/1:34,0:34:25.17:232,25,0	1/1:2,26:28:63.13:643,63,0	1/1:0,30:30:78.18:795,78,0	1/1:1,41:42:99:1132,111,0	1/1:25,0:25:51.05:202,51,0	1/1:33,0:33:42.97:223,43,0	1/1:34,0:34:49.80:294,50,0	1/1:11,0:11:21.86:94,22,0
chr10	7304549	.	TC	T	14815.85	PASS	AB=1.000;AC=50;AF=0.893;AN=56;BaseQRankSum=-3.050;DP=690;FS=9.107;HRun=4;HaplotypeScore=92.7400;InbreedingCoeff=0.6334;MQ=78.09;MQ0=0;MQRankSum=-9.263;QD=22.90;ReadPosRankSum=9.013;VQSLOD=2.7722;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:1,32:33:78.24:932,78,0	1/1:1,16:17:48.05:539,48,0	0/0:21,0:20:59.77:0,60,711	0/0:22,0:21:22.83:0,23,458	1/1:0,30:30:75.16:878,75,0	1/1:4,17:21:45.14:537,45,0	1/1:1,13:14:33.10:395,33,0	1/1:3,26:29:75.22:887,75,0	1/1:2,23:25:63.19:753,63,0	1/1:3,25:28:77.23:872,77,0	1/1:0,25:25:66.08:754,66,0	1/1:25,0:25:49.62:160,50,0	0/1:32,0:32:62.28:79,0,62	1/1:24,0:24:14.98:73,15,0	1/1:1,24:25:69.21:825,69,0	1/1:2,20:22:54.16:646,54,0	1/1:1,18:19:42.13:502,42,0	1/1:0,10:10:27.08:323,27,0	1/1:1,10:11:30.07:338,30,0	1/1:0,27:27:78.12:884,78,0	1/1:2,31:33:81.25:968,81,0	0/1:28,0:28:9.63:77,0,10	1/1:31,0:31:40.45:183,40,0	1/1:42,0:42:46.73:159,47,0	1/1:0,22:22:60.18:718,60,0	1/1:1,30:31:90.21:1039,90,0	1/1:1,31:32:87.18:1008,87,0	1/1:0,11:11:24.07:286,24,0
chr10	7304757	.	CAT	C	10804.02	PASS	AB=0.900;AC=39;AF=0.696;AN=56;BaseQRankSum=18.342;DP=588;FS=2.188;HRun=0;HaplotypeScore=225.8952;InbreedingCoeff=0.8853;MQ=60.16;MQ0=0;MQRankSum=-17.789;QD=29.52;ReadPosRankSum=-0.316;VQSLOD=4.9131;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,105,2133	1/1:0,14:14:42.09:441,42,0	0/0:8,1:9:2.99:0,3,95	0/1:8,1:9:36.99:37,0,51	1/1:3,25:28:68.99:672,69,0	1/1:1,15:16:48.11:504,48,0	1/1:1,11:12:36.07:370,36,0	1/1:5,24:29:87.22:960,87,0	1/1:2,15:17:51.08:516,51,0	1/1:1,18:19:57.16:643,57,0	1/1:1,19:20:54.12:559,54,0	0/0:26,0:26:78.27:0,78,1552	0/0:29,0:29:87.30:0,87,1724	0/0:31,0:31:90.78:0,91,1815	1/1:4,32:36:99:1083,108,0	1/1:0,18:18:54.13:568,54,0	1/1:0,10:10:24.06:256,24,0	1/1:1,10:11:32.97:337,33,0	1/1:0,14:18:54.08:574,54,0	1/1:2,16:18:51.11:533,51,0	1/1:1,11:12:23.74:223,24,0	0/0:29,0:29:87.30:0,87,1734	0/0:23,0:23:69.24:0,69,1388	0/0:39,0:39:99:0,117,2378	1/1:0,11:11:33.08:349,33,0	1/1:1,19:20:60.16:669,60,0	1/1:0,34:34:99:1107,102,0	1/1:6,8:14:41.99:403,42,0
chr10	7304762	.	TTCCCACA	T	21044.60	PASS	AB=0.923;AC=39;AF=0.696;AN=56;BaseQRankSum=18.764;DP=566;FS=0.648;HRun=0;HaplotypeScore=241.8811;InbreedingCoeff=0.9111;MQ=60.63;MQ0=0;MQRankSum=-18.761;QD=61.00;ReadPosRankSum=1.666;VQSLOD=4.4754;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,111,4562	1/1:0,14:14:42.14:932,42,0	0/1:10,0:12:25.28:25,0,386	0/0:9,0:9:14.19:0,14,291	1/1:0,25:25:48.33:1277,48,0	1/1:0,15:15:45.15:1003,45,0	1/1:0,11:11:33.11:729,33,0	1/1:1,24:25:74.47:1670,74,0	1/1:3,14:18:48.16:1040,48,0	1/1:1,18:19:56.56:1252,57,0	1/1:1,19:20:42.31:1161,42,0	0/0:27,0:27:81.28:0,81,3170	0/0:26,0:26:78.25:0,78,3071	0/0:30,0:30:87.29:0,87,3598	1/1:0,32:32:96.33:2103,96,0	1/1:1,18:19:57.20:1248,57,0	1/1:1,10:11:23.82:534,24,0	1/1:0,10:10:30.10:655,30,0	1/1:0,14:14:42.14:964,42,0	1/1:0,16:16:48.16:1068,48,0	1/1:0,11:11:21.06:466,21,0	0/0:30,0:30:87.30:0,87,3560	0/0:22,0:22:66.23:0,66,2737	0/0:39,0:39:99:0,117,4874	1/1:0,11:11:33.11:734,33,0	1/1:1,19:20:60.20:1339,60,0	1/1:0,34:34:99:2297,102,0	1/1:0,8:8:24.08:546,24,0
chr10	7305681	.	T	TC	16633.56	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-16.002;DP=655;FS=2.356;HRun=5;HaplotypeScore=57.1429;InbreedingCoeff=0.9999;MQ=87.66;MQ0=0;MQRankSum=-4.875;QD=34.51;ReadPosRankSum=3.737;VQSLOD=5.1259;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,40:47:97.65:1480,98,0	1/1:0,11:11:30.10:395,30,0	0/0:26,0:27:71.65:0,72,739	0/0:20,0:20:50.83:0,51,512	1/1:2,26:28:78.25:1019,78,0	1/1:1,22:23:66.21:868,66,0	1/1:0,14:14:36.12:474,36,0	1/1:5,26:31:75.23:973,75,0	1/1:1,16:17:45.15:592,45,0	1/1:2,23:25:72.22:926,72,0	1/1:2,27:29:75.24:981,75,0	0/0:21,0:21:60.14:0,60,637	0/0:24,0:24:72.16:0,72,763	0/0:18,0:18:51.11:0,51,540	1/1:1,24:25:69.22:908,69,0	1/1:0,18:18:54.18:711,54,0	1/1:2,19:21:51.17:671,51,0	1/1:1,14:15:42.14:553,42,0	1/1:2,14:16:42.05:499,42,0	1/1:0,23:23:66.17:848,66,0	1/1:2,21:23:63.20:829,63,0	0/0:20,0:20:57.14:0,57,613	0/0:26,0:26:78.20:0,78,838	0/0:17,0:17:48.12:0,48,515	1/1:1,21:22:60.20:789,60,0	1/1:4,33:37:99:1302,99,0	1/1:3,28:30:81.26:1065,81,0	1/1:5,21:26:57.19:750,57,0
chr10	7307051	.	AACACACACAC	A	408.37	PASS	AC=10;AF=0.250;AN=40;BaseQRankSum=4.357;DP=391;FS=9.383;HRun=0;HaplotypeScore=133.0799;InbreedingCoeff=0.5294;MQ=63.56;MQ0=19;MQRankSum=-3.242;QD=5.52;ReadPosRankSum=-1.194;VQSLOD=1.8609;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:15.03:0,15,350	0/0:5,0:4:6.01:0,6,84	./.	./.	./.	0/0:8,0:7:6.02:0,6,134	0/0:13,0:13:12:0,12,192	0/0:21,0:21:9.87:0,10,122	./.	0/0:18,0:18:19.62:0,20,445	./.	./.	1/1:9,2:10:6.02:163,6,0	1/1:8,3:11:9.03:249,9,0	0/0:9,0:8:0:0,0,0	0/0:9,0:7:3.01:0,3,124	0/0:22,0:22:10.23:0,10,118	0/0:12,0:12:4.83:0,5,49	0/0:13,0:13:3.90:0,4,106	0/0:8,0:8:3.01:0,3,65	0/0:16,0:14:0:0,0,0	1/1:18,4:22:0.47:1,0,0	1/1:15,2:17:3.01:89,3,0	1/1:10,3:13:3.04:21,3,0	./.	0/0:24,0:23:24.07:0,24,531	0/0:8,0:8:10.25:0,10,115	./.
chr10	7307096	.	A	ACACGCGCGCGCGCG	2569.41	PASS	AB=1.000;AC=32;AF=0.615;AN=52;BaseQRankSum=-1.634;DP=253;FS=1.325;HRun=0;HaplotypeScore=91.0886;InbreedingCoeff=0.3612;MQ=47.98;MQ0=26;MQRankSum=0.184;QD=15.67;ReadPosRankSum=1.110;VQSLOD=1.6395;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:4.25:0,4,45	0/1:5,0:4:0:0,0,1	0/0:14,0:2:3.01:0,3,79	0/0:19,0:7:8.85:0,9,262	./.	1/1:11,0:10:11.04:344,11,0	1/1:12,0:9:2.66:20,3,0	1/1:13,0:12:14.19:132,14,0	1/1:7,0:5:2.74:107,3,0	0/1:9,0:9:36.37:251,0,36	1/1:4,0:4:5.99:50,6,0	0/0:2,0:2:0:0,0,0	0/0:4,0:3:5.31:0,5,27	0/1:6,0:6:11.11:28,0,11	./.	0/0:4,0:3:3:0,3,25	1/1:8,1:16:17.02:333,17,0	1/1:14,0:11:6.02:368,6,0	1/1:9,0:8:12.04:518,12,0	1/1:9,0:8:0.47:1,0,0	0/1:11,0:8:0:0,0,0	0/0:6,0:5:0.47:0,0,1	1/1:5,0:5:2.60:10,3,0	1/1:8,0:7:2.72:49,3,0	0/0:6,0:5:0:0,0,0	1/1:15,0:13:23.16:360,23,0	1/1:9,0:8:5.59:69,6,0	1/1:1,0:1:3.01:61,3,0
chr10	7307098	.	A	ACGCGCGCGCGCG	2981.81	PASS	AB=1.000;AC=39;AF=0.722;AN=54;BaseQRankSum=0.442;DP=249;FS=1.578;HRun=0;HaplotypeScore=84.9855;InbreedingCoeff=0.3191;MQ=48.12;MQ0=24;MQRankSum=-0.049;QD=15.78;ReadPosRankSum=0.776;VQSLOD=1.9060;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:21,0:21:10.01:10,0,39	1/1:5,0:4:2.64:24,3,0	0/0:14,0:2:3.01:0,3,86	0/0:19,0:7:9.97:0,10,284	0/1:8,0:7:0:0,0,0	1/1:12,0:11:11.36:343,11,0	1/1:11,0:8:2.54:20,3,0	1/1:12,0:12:14.19:132,14,0	1/1:7,0:5:2.58:107,3,0	0/1:9,0:9:40.04:266,0,40	1/1:5,0:5:6.02:98,6,0	0/1:2,0:2:0:0,0,0	1/1:3,0:3:4.47:22,4,0	1/1:7,0:7:10.23:118,10,0	./.	0/0:4,0:3:3:0,3,25	1/1:11,0:11:14.17:261,14,0	1/1:4,3:13:6.02:326,6,0	1/1:9,0:8:11.99:546,12,0	1/1:9,0:8:5.83:45,6,0	0/0:11,0:8:0:0,0,0	0/1:6,0:5:0:0,0,0	1/1:5,0:5:3.01:45,3,0	1/1:8,0:7:3.10:80,3,0	0/0:6,0:5:0:0,0,0	1/1:15,0:13:23.16:422,23,0	1/1:6,0:5:8.95:141,9,0	1/1:2,0:2:5.99:102,6,0
chr10	7309658	.	G	GTTA	31342.61	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-9.653;DP=552;FS=15.854;HRun=0;HaplotypeScore=65.2967;InbreedingCoeff=0.9821;MQ=88.58;MQ0=1;MQRankSum=-11.039;QD=62.81;ReadPosRankSum=7.091;VQSLOD=5.3489;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,41:45:99:2874,120,0	1/1:0,4:5:15.01:316,15,0	0/0:33,0:33:77.99:0,78,1454	0/0:20,0:20:54.17:0,54,913	1/1:0,20:19:54.19:1312,54,0	1/1:0,14:14:36.12:886,36,0	1/1:1,14:15:39.13:924,39,0	1/1:2,8:11:30.10:705,30,0	1/1:1,31:33:93.32:2290,93,0	1/1:0,22:22:66.23:1598,66,0	1/1:0,11:12:30.10:736,30,0	1/1:1,20:21:48.16:1181,48,0	1/1:2,17:20:54.19:1328,54,0	1/1:0,12:12:27.09:665,27,0	1/1:1,27:30:68.75:1767,69,0	1/1:0,21:24:60.21:1477,60,0	1/1:2,30:33:78.27:1923,78,0	1/1:0,15:15:39.13:961,39,0	1/1:2,8:13:39.12:818,39,0	1/1:0,13:13:39.09:816,39,0	1/1:2,26:29:75.26:1759,75,0	1/1:0,19:19:54.18:1293,54,0	1/1:0,9:9:27.09:666,27,0	1/1:1,19:19:45.15:1109,45,0	1/1:0,16:15:45.15:1109,45,0	1/1:0,17:18:54.19:1302,54,0	1/1:0,15:18:48.16:1178,48,0	1/1:0,5:8:15.05:352,15,0
chr10	7310150	.	ATG	A	7213	PASS	AB=0.825;AC=48;AF=0.857;AN=56;BaseQRankSum=-1.953;DP=448;FS=0.877;HRun=0;HaplotypeScore=108.4842;InbreedingCoeff=0.3233;MQ=57.35;MQ0=6;MQRankSum=-0.529;QD=18.35;ReadPosRankSum=4.009;VQSLOD=5.0198;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:21,7:27:40.91:469,41,0	1/1:2,5:7:6.02:77,6,0	0/0:25,0:11:18.06:0,18,284	0/0:29,0:16:24.55:0,25,394	1/1:2,9:11:12.01:154,12,0	1/1:2,7:9:18.06:229,18,0	1/1:7,14:21:36.10:448,36,0	1/1:9,21:29:60.18:755,60,0	1/1:4,21:25:44.97:539,45,0	0/1:7,6:12:26.67:210,0,27	1/1:1,12:13:12.51:149,13,0	1/1:10,7:17:12.76:234,13,0	1/1:3,5:7:15.04:187,15,0	1/1:5,8:13:20.86:245,21,0	1/1:4,10:14:27.09:346,27,0	1/1:5,9:13:21.07:270,21,0	1/1:5,15:19:42.14:540,42,0	1/1:5,9:14:32.65:402,33,0	1/1:7,15:21:48.12:578,48,0	1/1:2,7:9:15.05:193,15,0	1/1:11,17:27:42.12:526,42,0	1/1:1,5:6:6.02:77,6,0	1/1:2,12:14:20.33:269,20,0	0/1:12,9:21:23.63:101,0,24	1/1:8,4:12:0.83:134,1,0	0/1:10,1:11:15.87:42,0,16	1/1:8,0:8:6.78:26,7,0	0/1:5,0:5:14:14,0,33
chr10	7310158	.	G	GTGCA	4881.67	PASS	AB=0.961;AC=33;AF=0.589;AN=56;BaseQRankSum=-1.132;DP=458;FS=1.735;HRun=0;HaplotypeScore=141.7345;InbreedingCoeff=0.1156;MQ=47.38;MQ0=11;MQRankSum=-5.178;QD=13.23;ReadPosRankSum=-1.933;VQSLOD=4.0210;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:28:16.05:583,16,0	0/1:5,0:5:0.56:50,0,1	0/0:30,0:9:23.61:0,24,340	0/0:33,0:12:27.07:0,27,460	1/1:10,0:10:3.62:76,4,0	1/1:11,0:11:6.56:129,7,0	0/1:25,0:25:11.17:153,0,11	0/1:28,0:26:79.23:226,0,79	1/1:23,1:24:21.80:570,22,0	0/1:8,0:7:43.39:63,0,43	1/1:12,0:12:3.92:97,4,0	0/1:10,4:14:21.09:310,0,21	1/1:9,0:9:10.45:146,10,0	1/1:10,4:14:9.20:246,9,0	0/1:14,0:14:2.56:147,0,3	0/1:13,0:12:0.54:149,0,1	0/1:24,0:23:3.76:345,0,4	1/1:14,0:14:16.85:382,17,0	0/1:20,0:19:13.78:298,0,14	1/1:9,0:9:11.55:232,12,0	0/1:33,0:32:60.96:108,0,61	0/1:8,0:8:2.13:12,0,2	0/1:12,1:13:2:150,0,2	0/1:14,5:19:54.73:63,0,55	1/1:6,6:12:7.34:346,7,0	0/0:11,0:11:20.21:0,20,378	0/0:8,0:8:24.05:0,24,300	0/0:7,0:7:17.99:0,18,182
chr10	7310160	.	G	GCA	2040.92	PASS	AB=1.000;AC=22;AF=0.393;AN=56;BaseQRankSum=2.605;DP=454;FS=1.813;HRun=0;HaplotypeScore=135.5286;InbreedingCoeff=-0.5031;MQ=45.37;MQ0=12;MQRankSum=-4.845;QD=6.26;ReadPosRankSum=3.043;VQSLOD=3.3856;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:14,15:28:7.05:567,7,0	0/1:5,0:5:10.16:34,0,10	0/0:31,0:8:23.56:0,24,331	0/0:34,0:11:30.10:0,30,463	0/1:10,0:10:29.32:29,0,57	0/1:10,0:10:56.19:61,0,56	0/1:25,0:25:21.20:21,0,139	0/1:28,0:26:14.04:14,0,277	0/1:24,0:24:49.26:302,0,49	0/1:8,0:7:20.06:20,0,96	0/1:12,0:12:26.59:27,0,34	0/1:14,0:14:62.26:62,0,108	0/1:10,0:9:20.09:20,0,58	0/1:14,0:14:37.93:90,0,38	0/1:15,0:15:92.88:93,0,94	0/1:13,0:12:47.76:99,0,48	0/1:23,0:23:99:143,0,128	0/1:14,0:14:32.01:220,0,32	0/1:20,0:19:99:183,0,155	0/1:8,0:8:17.06:105,0,17	0/0:30,0:29:24.50:0,24,260	0/0:8,0:8:2.06:0,2,15	0/1:14,0:14:11.28:11,0,45	0/1:19,0:19:4.88:5,0,58	0/1:11,0:11:52.70:94,0,53	0/0:10,0:10:29.82:0,30,347	0/0:8,0:8:23.91:0,24,248	0/0:7,0:7:17.85:0,18,147
chr10	7310162	.	GCA	G	1028.37	PASS	AB=0.938;AC=14;AF=0.250;AN=56;BaseQRankSum=3.765;DP=461;FS=1.874;HRun=0;HaplotypeScore=139.1084;InbreedingCoeff=0.2194;MQ=45.23;MQ0=13;MQRankSum=-5.511;QD=6.19;ReadPosRankSum=4.755;VQSLOD=3.1037;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:27,2:28:11.21:260,11,0	0/0:5,0:5:0.61:0,1,8	0/1:30,1:8:23.66:24,0,272	0/0:35,0:11:30.10:0,30,540	0/0:10,0:10:7.14:0,7,47	0/0:10,0:10:8.76:0,9,66	0/0:25,0:25:33.47:0,33,188	0/0:28,1:27:20.42:0,20,258	0/0:24,0:24:7.15:0,7,91	0/0:8,0:7:1.54:0,2,67	0/0:12,0:12:6.22:0,6,24	0/0:14,0:14:27.40:0,27,161	0/1:12,0:11:14.91:15,0,22	0/1:15,0:15:9.31:9,0,51	0/0:14,0:14:11.02:0,11,124	0/0:13,0:12:10.96:0,11,68	0/1:23,1:23:3.91:4,0,45	0/1:13,0:13:15.52:16,0,109	0/0:21,0:20:6.78:0,7,160	0/1:8,0:8:1.74:2,0,11	0/0:29,0:28:40.71:0,41,235	0/1:8,0:8:0.27:0,0,6	0/0:14,0:14:14.76:0,15,58	0/0:20,0:20:8.81:0,9,92	0/0:11,0:11:22.25:0,22,138	1/1:8,3:11:20.27:398,20,0	1/1:5,3:8:24.08:327,24,0	0/1:2,4:6:13.53:129,0,14
chr10	7310163	.	CAT	C	339.78	PASS	AB=0.987;AC=14;AF=0.250;AN=56;BaseQRankSum=6.271;DP=464;FS=10.808;HRun=0;HaplotypeScore=141.1641;InbreedingCoeff=-0.1051;MQ=46.25;MQ0=14;MQRankSum=-4.439;QD=1.98;ReadPosRankSum=4.655;VQSLOD=1.3288;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:29:19.43:19,0,90	0/1:5,0:5:6.26:6,0,31	0/0:32,1:9:2.73:0,3,320	0/0:38,0:12:33.11:0,33,641	0/1:9,1:10:1.53:2,0,87	0/1:10,0:10:3.97:4,0,125	0/0:24,1:25:46.85:0,47,424	0/0:26,3:27:24.82:0,25,735	0/1:24,0:24:49.86:50,0,198	0/0:8,0:7:19.99:0,20,178	0/0:11,0:11:4.18:0,4,89	0/0:14,0:14:20.60:0,21,297	0/0:11,0:10:20.23:0,20,156	0/1:14,1:15:8.63:9,0,137	0/0:14,0:14:7.44:0,7,232	0/1:12,0:11:2.50:3,0,116	0/0:24,0:23:3.54:0,4,209	0/1:13,0:13:15.93:16,0,129	0/1:20,0:19:10.51:11,0,394	0/1:8,0:8:20.88:21,0,53	0/0:29,0:28:46.66:0,47,525	0/0:8,0:8:5.75:0,6,48	0/0:14,0:14:19.82:0,20,195	0/0:20,0:20:18.27:0,18,164	0/0:10,1:11:13.27:0,13,203	0/1:11,0:11:7.26:146,0,7	1/1:8,0:8:23.51:148,24,0	0/1:6,0:6:11.12:52,0,11
chr10	7310167	.	TGC	T	895.80	PASS	AB=0.988;AC=19;AF=0.339;AN=56;BaseQRankSum=4.453;DP=462;FS=6.262;HRun=0;HaplotypeScore=135.8780;InbreedingCoeff=-0.0538;MQ=45.40;MQ0=15;MQRankSum=-2.659;QD=3.73;ReadPosRankSum=4.312;VQSLOD=1.4741;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:27:15.36:113,15,0	0/1:5,0:5:11.23:11,0,19	0/0:33,0:8:4.30:0,4,156	0/0:40,0:11:20.20:0,20,279	0/1:8,0:8:9.30:9,0,58	0/1:11,0:11:13.44:13,0,130	0/0:22,0:22:32.76:0,33,239	0/1:33,0:31:94.34:94,0,451	0/1:23,0:23:82.24:82,0,140	0/0:7,0:6:18.02:0,18,205	0/0:9,0:9:0.49:0,0,61	0/1:15,0:15:5.68:6,0,221	0/0:12,0:11:21.43:0,21,154	0/1:16,0:16:17.66:18,0,99	0/0:14,0:14:1.81:0,2,221	0/1:11,0:11:12.60:13,0,89	0/1:23,0:22:17.17:17,0,174	0/1:13,0:13:45.68:46,0,53	0/1:19,0:17:26.71:27,0,317	0/1:10,0:10:29.19:60,0,29	0/0:30,0:29:36.12:0,36,383	0/0:8,0:8:6:0,6,52	0/0:14,0:14:12.74:0,13,106	0/0:21,0:21:14.75:0,15,85	0/0:11,0:11:7.16:0,7,157	0/1:9,2:11:0.82:207,0,1	1/1:5,3:8:23.97:210,24,0	1/1:2,3:6:15:136,15,0
chr10	7310169	.	C	CGTGT	5827.11	PASS	AB=0.892;AC=44;AF=0.786;AN=56;BaseQRankSum=-4.707;DP=470;FS=0.000;HRun=0;HaplotypeScore=133.4382;InbreedingCoeff=0.3514;MQ=45.56;MQ0=15;MQRankSum=-0.978;QD=15.25;ReadPosRankSum=0.764;VQSLOD=4.1948;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:27:34.06:680,34,0	1/1:3,2:5:3.01:73,3,0	0/0:34,0:8:0.93:0,1,53	0/0:41,0:11:9.03:0,9,144	1/1:6,2:8:6.02:147,6,0	1/1:5,8:14:14.77:256,15,0	1/1:16,4:23:17.25:208,17,0	0/1:33,0:31:19.77:234,0,20	1/1:12,10:23:35.85:715,36,0	0/1:6,0:6:6.60:7,0,13	1/1:6,2:8:3.01:73,3,0	1/1:12,2:15:16.80:218,17,0	1/1:11,0:11:10.41:125,10,0	1/1:14,2:16:18.03:314,18,0	1/1:7,7:18:6.22:233,6,0	1/1:4,7:12:11.77:232,12,0	1/1:14,10:23:22.59:428,23,0	1/1:4,8:14:21.07:514,21,0	1/1:16,3:18:22.02:353,22,0	1/1:6,3:9:15.04:280,15,0	0/1:20,6:28:13.43:157,0,13	1/1:7,0:8:2.74:12,3,0	1/1:12,1:13:6:94,6,0	1/1:20,1:21:10.14:157,10,0	1/1:10,1:12:18.04:267,18,0	0/1:9,0:10:8.05:49,0,8	0/0:7,0:7:7.06:0,7,25	0/0:6,0:6:6.07:0,6,25
chr10	7310225	.	A	AC	1411.26	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-2.139;DP=400;FS=6.137;HRun=5;HaplotypeScore=70.3686;InbreedingCoeff=0.9710;MQ=89.00;MQ0=0;MQRankSum=-1.378;QD=29.40;ReadPosRankSum=1.390;VQSLOD=4.2537;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,18:21:45.15:588,45,0	0/0:3,0:3:9.02:0,9,97	0/0:22,0:22:48.59:0,49,513	0/0:17,0:16:24.02:0,24,314	0/0:7,0:7:21.05:0,21,225	0/0:12,0:12:21.05:0,21,226	0/0:15,0:15:33.08:0,33,355	0/0:31,0:31:87.22:0,87,934	0/0:16,0:16:45.07:0,45,467	0/0:11,0:11:33.08:0,33,352	0/0:8,0:8:18.05:0,18,193	0/0:24,0:24:69.17:0,69,739	0/0:12,0:12:33.07:0,33,349	0/0:17,0:17:42.10:0,42,443	0/0:13,0:13:27.07:0,27,290	0/0:18,0:18:48.11:0,48,508	0/0:26,0:25:60.14:0,60,643	0/0:17,0:17:42.11:0,42,450	0/0:11,0:11:30.08:0,30,322	0/0:7,0:7:18.05:0,18,193	0/0:21,0:21:54.12:0,54,572	0/0:8,0:8:24.06:0,24,258	0/0:9,0:9:23.94:0,24,257	0/0:17,0:17:38.75:0,39,417	0/0:10,0:10:18.04:0,18,193	1/1:1,10:11:30.10:391,30,0	1/1:0,8:8:21.07:276,21,0	1/1:0,8:8:24.08:315,24,0
chr10	7311433	.	AC	A	9364.15	PASS	AB=0.854;AC=54;AF=0.964;AN=56;BaseQRankSum=1.989;DP=604;FS=2.694;HRun=3;HaplotypeScore=205.3799;InbreedingCoeff=-0.0078;MQ=53.82;MQ0=0;MQRankSum=-4.352;QD=15.50;ReadPosRankSum=2.542;VQSLOD=4.6095;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:29,7:36:63.79:532,64,0	1/1:6,3:9:18.91:96,19,0	0/1:4,1:5:24.78:25,0,48	0/1:6,1:7:15.33:15,0,97	1/1:23,9:32:47.53:327,48,0	1/1:7,12:19:52.95:337,53,0	1/1:4,14:18:43.11:267,43,0	1/1:6,10:16:35.44:251,35,0	1/1:11,10:21:47.09:316,47,0	1/1:11,13:24:45.13:480,45,0	1/1:14,12:26:62.46:468,62,0	1/1:9,6:14:12.82:50,13,0	1/1:19,13:32:72.35:515,72,0	1/1:11,14:24:46.81:259,47,0	1/1:19,12:30:62.24:386,62,0	1/1:8,11:19:47.53:331,48,0	1/1:9,6:14:23.30:189,23,0	1/1:7,2:9:23.57:197,24,0	1/1:12,7:19:35.72:315,36,0	1/1:15,15:30:85.13:617,85,0	1/1:17,10:27:63.07:501,63,0	1/1:12,10:22:52.87:354,53,0	1/1:11,12:23:56.34:383,56,0	1/1:11,7:18:24.91:206,25,0	1/1:13,11:24:56.87:436,57,0	1/1:22,11:32:85.60:737,86,0	1/1:19,17:36:89.88:584,90,0	1/1:7,6:13:28.30:190,28,0
chr10	7311438	.	C	CA	12564.16	PASS	AB=1.000;AC=53;AF=0.946;AN=56;BaseQRankSum=2.563;DP=616;FS=1.167;HRun=1;HaplotypeScore=212.0874;InbreedingCoeff=0.6592;MQ=51.88;MQ0=0;MQRankSum=-5.046;QD=20.60;ReadPosRankSum=2.970;VQSLOD=4.8987;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:30,8:38:68.38:636,68,0	1/1:5,4:9:23.56:170,24,0	0/1:6,0:6:12.10:12,0,61	0/0:6,0:6:16.65:0,17,116	1/1:24,13:37:55.80:436,56,0	1/1:8,12:20:53.35:416,53,0	1/1:4,17:21:62.19:542,62,0	1/1:6,11:17:45.04:478,45,0	1/1:10,10:20:44.37:334,44,0	1/1:10,14:24:55.98:643,56,0	1/1:14,12:26:64.70:583,65,0	1/1:9,7:15:23.63:173,24,0	1/1:19,13:32:79.90:641,80,0	1/1:10,14:23:55.10:398,55,0	1/1:18,12:29:71.12:606,71,0	1/1:8,14:22:56.40:504,56,0	1/1:8,6:13:23.82:226,24,0	1/1:6,2:8:20.98:213,21,0	1/1:11,8:19:42.08:489,42,0	1/1:15,17:32:89.29:825,89,0	1/1:16,9:25:59.90:540,60,0	1/1:9,12:21:55.97:456,56,0	1/1:12,13:25:61.45:509,61,0	1/1:12,8:20:32.79:291,33,0	1/1:11,12:23:56.56:505,57,0	1/1:20,12:31:83.97:912,84,0	1/1:18,17:34:96.95:757,97,0	1/1:8,6:14:29.82:270,30,0
chr10	7311697	.	TG	T	3105.74	PASS	AB=0.938;AC=14;AF=0.250;AN=56;BaseQRankSum=3.959;DP=529;FS=13.485;HRun=1;HaplotypeScore=106.3018;InbreedingCoeff=0.7872;MQ=60.07;MQ0=2;MQRankSum=-0.800;QD=20.04;ReadPosRankSum=0.371;VQSLOD=2.5852;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:26:78.06:0,78,1042	0/0:7,0:7:18.04:0,18,214	0/0:26,0:16:12.26:0,12,455	0/0:26,0:19:13.87:0,14,548	0/0:32,0:32:50.87:0,51,742	0/0:15,0:14:38.51:0,39,415	0/0:15,0:15:33.10:0,33,444	0/0:23,0:22:57.55:0,58,647	0/0:14,0:14:24.06:0,24,324	0/0:22,0:22:60.44:0,60,686	0/0:11,0:11:19.98:0,20,287	1/1:0,12:12:24.08:309,24,0	1/1:4,15:18:44.89:514,45,0	1/1:9,8:17:42.89:454,43,0	0/0:12,1:13:10.37:0,10,305	0/0:12,0:12:23.98:0,24,278	0/0:14,0:14:36.05:0,36,445	0/1:14,1:15:14.51:15,0,272	0/0:24,2:26:15.97:0,16,638	0/0:20,0:20:54.02:0,54,667	0/0:7,0:7:17.94:0,18,194	1/1:7,15:22:58.21:717,58,0	1/1:4,23:26:69.90:906,70,0	1/1:1,12:13:18.06:234,18,0	0/0:22,0:22:42.88:0,43,481	0/1:28,2:30:99:149,0,354	0/0:19,0:19:17.87:0,18,172	0/0:22,0:22:26.26:0,26,248
chr10	7311698	.	G	GTTTT	3758.84	PASS	AB=0.974;AC=32;AF=0.571;AN=56;BaseQRankSum=12.533;DP=533;FS=2.789;HRun=4;HaplotypeScore=132.4901;InbreedingCoeff=-0.1849;MQ=62.91;MQ0=2;MQRankSum=-5.855;QD=8.48;ReadPosRankSum=2.756;VQSLOD=-0.0129;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:26:72.21:0,72,1166	0/1:6,0:7:48.10:104,0,48	0/0:29,0:18:28.78:0,29,487	0/0:27,0:20:41.46:0,41,562	0/1:32,0:33:99:271,0,233	0/1:14,0:13:61.12:178,0,61	0/1:15,0:15:99:99,0,129	0/1:22,0:22:99:132,0,261	0/1:13,0:13:4.22:4,0,197	0/1:24,0:24:99:137,0,153	0/1:12,0:12:26.09:26,0,157	1/1:12,0:12:9.72:112,10,0	1/1:19,0:18:24.03:216,24,0	0/1:16,0:16:4.81:135,0,5	0/1:12,0:13:94.65:95,0,104	0/1:12,0:12:80.05:88,0,80	0/1:14,0:14:99:102,0,169	0/1:13,0:14:59.69:60,0,132	0/1:24,0:25:47.24:47,0,331	0/1:21,0:21:99:186,0,187	0/0:7,0:7:8.96:0,9,84	1/1:22,0:22:14.28:180,14,0	1/1:27,0:26:41.38:348,41,0	1/1:14,0:14:2.15:66,2,0	0/1:21,0:22:99:215,0,120	1/1:29,0:30:33.40:486,33,0	1/1:6,11:19:5.05:78,5,0	1/1:6,5:22:19:392,19,0
chr10	7311701	.	TTG	T	1635.14	PASS	AB=1.000;AC=16;AF=0.286;AN=56;BaseQRankSum=3.836;DP=530;FS=18.488;HRun=0;HaplotypeScore=118.2703;InbreedingCoeff=0.5960;MQ=63.22;MQ0=2;MQRankSum=2.404;QD=8.94;ReadPosRankSum=-1.174;VQSLOD=1.7349;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:26:72.14:0,72,1137	0/1:8,0:8:0.12:0,0,111	0/0:29,0:19:41.92:0,42,573	0/0:27,0:20:49.08:0,49,576	0/0:35,0:35:16.57:0,17,456	0/0:14,0:13:32.20:0,32,252	0/0:15,0:15:29.84:0,30,304	0/0:22,0:21:29.70:0,30,405	0/0:13,0:13:21.04:0,21,297	0/0:25,0:25:45.40:0,45,504	0/0:14,0:14:7.37:0,7,225	1/1:11,0:11:6.75:93,7,0	1/1:15,5:19:23.51:209,24,0	1/1:12,3:15:8.06:233,8,0	0/0:13,1:14:10.24:0,10,250	0/0:11,0:11:18.01:0,18,193	0/0:12,0:12:29.80:0,30,243	0/0:13,0:13:0.06:0,0,168	0/0:25,0:25:9.78:0,10,522	0/0:21,0:21:37.92:0,38,480	0/0:5,0:5:8.79:0,9,58	1/1:18,3:21:39.09:406,39,0	1/1:27,1:27:65.78:487,66,0	1/1:13,0:13:8.55:136,9,0	0/0:24,0:24:31.83:0,32,340	0/1:29,0:29:43.13:230,0,43	0/1:18,0:18:14.47:14,0,31	0/1:20,0:20:4:4,0,11
chr10	7311703	.	G	GTTTT	8725.24	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=4.083;DP=564;FS=4.309;HRun=8;HaplotypeScore=121.0934;InbreedingCoeff=0.7807;MQ=63.51;MQ0=2;MQRankSum=-5.974;QD=18.25;ReadPosRankSum=0.915;VQSLOD=1.6749;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:27:72.21:0,72,1049	1/1:4,0:8:18.01:274,18,0	0/0:30,0:19:38.28:0,38,482	0/0:28,0:21:37.05:0,37,496	1/1:15,1:41:52.56:731,53,0	1/1:5,0:16:20.08:459,20,0	1/1:6,2:18:21.05:367,21,0	1/1:9,2:23:33.49:463,33,0	1/1:7,1:14:3.01:58,3,0	1/1:5,0:27:46.21:541,46,0	1/1:6,2:19:10.87:136,11,0	1/1:5,0:10:15.04:164,15,0	1/1:10,0:19:33.06:356,33,0	1/1:8,0:14:30.67:289,31,0	1/1:6,0:17:14.98:248,15,0	1/1:2,0:10:12.04:230,12,0	1/1:5,0:13:15.05:287,15,0	1/1:5,2:16:9.03:142,9,0	1/1:16,1:27:38.06:307,38,0	1/1:7,1:23:39.46:612,39,0	1/1:4,0:4:1.74:21,2,0	1/1:5,0:20:56.82:607,57,0	1/1:6,0:28:78.09:846,78,0	1/1:7,0:14:18.02:193,18,0	1/1:6,0:27:30.08:532,30,0	1/1:30,0:30:28.97:396,29,0	1/1:17,0:17:4.26:76,4,0	1/1:18,0:18:18.05:390,18,0
chr10	7312855	.	AG	A	5515.97	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=17.306;DP=517;FS=50.560;HRun=1;HaplotypeScore=98.6935;InbreedingCoeff=0.9982;MQ=85.98;MQ0=0;MQRankSum=-5.256;QD=36.77;ReadPosRankSum=3.046;VQSLOD=1.1600;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:96.33:0,96,1534	0/0:6,0:6:18.06:0,18,286	0/0:16,0:16:48.15:0,48,728	0/0:20,0:20:57.07:0,57,885	0/0:18,0:18:51.17:0,51,815	0/0:9,0:9:27.09:0,27,429	0/0:20,0:20:60.19:0,60,936	0/0:20,0:20:60.20:0,60,958	0/0:20,0:20:60.19:0,60,933	0/0:29,0:29:87.25:0,87,1319	0/0:20,0:20:60.20:0,60,957	1/1:0,21:21:63.20:816,63,0	1/1:0,19:19:51.14:659,51,0	1/1:0,12:12:36.12:466,36,0	0/0:19,0:19:57.18:0,57,888	0/0:10,0:10:30.10:0,30,480	0/0:30,0:30:90.29:0,90,1403	0/0:33,0:33:99:0,99,1575	0/0:12,0:12:36.12:0,36,576	0/0:10,0:10:30.09:0,30,445	0/0:31,0:31:90.31:0,90,1436	1/1:0,19:19:57.18:736,57,0	1/1:2,15:17:48.14:600,48,0	1/1:3,15:18:45.13:568,45,0	0/0:12,0:12:33.11:0,33,528	1/1:0,14:14:42.14:543,42,0	1/1:0,20:20:57.19:737,57,0	1/1:0,10:10:30.10:388,30,0
chr10	7313893	.	TC	T	946.85	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=6.353;DP=591;FS=0.609;HRun=8;HaplotypeScore=119.0469;InbreedingCoeff=0.9864;MQ=68.64;MQ0=0;MQRankSum=-4.503;QD=20.15;ReadPosRankSum=1.435;VQSLOD=2.5393;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:89.75:0,90,1046	0/0:10,0:10:24.07:0,24,285	0/0:19,0:20:35.86:0,36,362	0/0:11,0:11:11.78:0,12,183	0/0:21,0:21:57.16:0,57,666	0/0:17,1:18:22.18:0,22,544	0/0:23,0:23:63.19:0,63,754	0/0:23,0:23:54.17:0,54,647	0/0:22,0:22:54.16:0,54,643	0/0:22,0:22:48.14:0,48,567	0/0:15,0:15:45.14:0,45,539	0/0:27,0:27:72.20:0,72,840	0/0:16,0:17:41.83:0,42,456	0/0:35,0:35:84.24:0,84,986	0/0:26,0:26:69.15:0,69,768	0/0:15,0:15:36.11:0,36,431	0/0:19,0:19:54.16:0,54,643	0/0:27,0:27:75.63:0,76,861	0/0:19,0:19:51.13:0,51,595	0/0:26,0:26:75.21:0,75,878	0/0:20,0:20:60.17:0,60,707	0/0:22,0:22:54.17:0,54,646	0/0:18,0:18:44.96:0,45,522	0/0:28,0:28:75.23:0,75,898	0/0:28,0:28:57.16:0,57,673	1/1:3,15:18:42.04:396,42,0	1/1:3,13:16:39.06:376,39,0	1/1:2,11:12:33.05:318,33,0
chr10	7313903	.	CA	C	5143.09	PASS	AB=0.988;AC=46;AF=0.821;AN=56;BaseQRankSum=9.442;DP=596;FS=4.847;HRun=1;HaplotypeScore=110.5215;InbreedingCoeff=0.5057;MQ=69.73;MQ0=0;MQRankSum=-2.430;QD=9.67;ReadPosRankSum=6.947;VQSLOD=2.6544;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:92.95:0,93,1414	1/1:10,0:10:24.40:104,24,0	0/0:17,0:17:33.09:0,33,561	0/0:12,1:13:12.41:0,12,205	0/1:18,1:19:14.25:179,0,14	1/1:18,0:18:32.17:177,32,0	1/1:26,0:26:12.38:195,12,0	0/1:24,0:24:18.39:132,0,18	1/1:25,0:25:58.34:283,58,0	1/1:21,0:21:47.69:156,48,0	1/1:18,0:18:19.68:155,20,0	1/1:27,0:27:36.97:253,37,0	0/1:15,0:15:9.47:123,0,9	1/1:29,0:29:50.47:331,50,0	1/1:22,0:22:58.25:293,58,0	1/1:17,0:17:13.18:131,13,0	1/1:22,0:22:32.11:236,32,0	1/1:25,1:26:27.61:278,28,0	1/1:16,0:16:34.18:125,34,0	1/1:26,1:27:47.77:342,48,0	1/1:24,0:24:19.03:220,19,0	1/1:24,0:24:28.72:184,29,0	1/1:18,0:18:29.80:197,30,0	1/1:30,0:30:54.45:312,54,0	0/1:25,0:25:47.31:118,0,47	1/1:15,0:15:30.91:172,31,0	1/1:19,0:19:48.77:274,49,0	1/1:15,0:15:33.89:171,34,0
chr10	7313904	.	AC	A	16252.83	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=3.151;DP=594;FS=8.390;HRun=4;HaplotypeScore=71.5872;InbreedingCoeff=0.9967;MQ=69.02;MQ0=0;MQRankSum=-1.790;QD=30.67;ReadPosRankSum=2.799;VQSLOD=5.1539;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:34:96.16:0,96,1294	1/1:0,10:10:27.08:324,27,0	0/0:17,1:17:37.88:0,38,493	0/0:11,1:12:18.25:0,18,235	1/1:4,16:20:48.11:560,48,0	1/1:1,17:18:48.15:576,48,0	1/1:2,24:26:59.83:719,60,0	1/1:2,22:24:63.18:743,63,0	1/1:0,25:25:63.19:755,63,0	1/1:0,21:21:63.16:741,63,0	1/1:1,17:18:45.14:540,45,0	1/1:1,26:27:63.10:755,63,0	1/1:1,13:14:36.11:431,36,0	1/1:0,28:28:78.24:935,78,0	1/1:0,22:22:63.19:755,63,0	1/1:1,16:17:39.12:468,39,0	1/1:1,21:22:57.17:683,57,0	1/1:3,23:26:72.16:834,72,0	1/1:0,16:16:45.12:516,45,0	1/1:2,25:27:78:894,78,0	1/1:2,22:24:66.20:792,66,0	1/1:1,23:24:54.16:648,54,0	1/1:2,16:18:45.14:539,45,0	1/1:1,29:30:81.25:972,81,0	1/1:3,21:24:45.14:539,45,0	1/1:3,12:15:42.12:491,42,0	1/1:0,19:19:51.16:610,51,0	1/1:0,15:15:36.11:431,36,0
chr10	7315038	.	ACAT	A	7037.74	PASS	AC=48;AF=0.889;AN=54;BaseQRankSum=4.579;DP=229;FS=2.985;HRun=0;HaplotypeScore=45.9591;InbreedingCoeff=0.7037;MQ=73.33;MQ0=1;MQRankSum=-7.805;QD=43.71;ReadPosRankSum=0.567;VQSLOD=5.9236;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:84.29:0,84,1903	1/1:0,3:3:9.03:150,9,0	0/0:14,1:12:27.09:0,27,613	0/0:19,0:18:39.13:0,39,786	1/1:1,13:14:30.10:497,30,0	1/1:0,4:4:12.04:200,12,0	1/1:0,6:6:18.06:299,18,0	1/1:1,22:22:63.22:1034,63,0	1/1:0,3:3:9.03:150,9,0	1/1:0,9:9:27.09:449,27,0	1/1:1,11:12:36.12:595,36,0	1/1:0,2:2:6.02:100,6,0	1/1:0,1:1:3.01:50,3,0	1/1:0,5:5:15.05:250,15,0	1/1:0,2:2:6.02:100,6,0	1/1:0,5:5:15.05:250,15,0	1/1:0,12:12:30.10:499,30,0	1/1:1,5:6:15.05:250,15,0	1/1:3,8:11:27.08:424,27,0	1/1:1,7:8:18.06:297,18,0	1/1:0,9:9:21.07:349,21,0	1/1:0,3:3:6.02:100,6,0	1/1:0,3:3:5.82:100,6,0	1/1:1,1:2:3.01:50,3,0	1/1:0,6:6:18.06:299,18,0	1/1:0,8:8:24.08:399,24,0	1/1:0,4:4:9.03:150,9,0	./.
chr10	7315076	.	C	CT	2813.03	PASS	AB=0.734;AC=44;AF=0.846;AN=52;BaseQRankSum=-0.004;DP=227;FS=0.000;HRun=6;HaplotypeScore=42.2174;InbreedingCoeff=0.3203;MQ=35.10;MQ0=17;MQRankSum=-5.492;QD=14.65;ReadPosRankSum=-3.433;VQSLOD=1.7466;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:23:54.12:0,54,551	1/1:2,0:2:2.98:22,3,0	./.	0/0:6,0:2:2.99:0,3,24	0/1:2,3:4:0:0,0,0	1/1:5,3:7:9:96,9,0	1/1:7,5:9:12:133,12,0	1/1:12,16:26:42.13:528,42,0	1/1:2,4:6:11.40:117,11,0	1/1:4,2:5:5.98:58,6,0	1/1:1,4:5:6.02:75,6,0	1/1:2,6:8:12.98:152,13,0	1/1:4,2:4:6.02:76,6,0	1/1:6,1:7:3.48:39,3,0	1/1:3,7:7:15.05:186,15,0	1/1:3,3:6:12.04:151,12,0	1/1:9,7:13:18.53:227,19,0	1/1:2,6:7:12.04:145,12,0	1/1:6,11:15:36.07:418,36,0	1/1:2,3:4:9.03:113,9,0	0/1:3,3:5:21.51:66,0,22	0/1:5,0:5:0:1,0,0	1/1:1,0:1:0.47:1,0,0	1/1:4,1:4:3.01:38,3,0	1/1:5,1:4:6.01:56,6,0	0/1:4,5:8:9.50:203,0,10	1/1:3,2:4:3.01:38,3,0	./.
chr10	7315385	.	AT	A	6460.39	PASS	AB=0.650;AC=52;AF=0.929;AN=56;BaseQRankSum=-0.263;DP=315;FS=7.870;HRun=1;HaplotypeScore=106.6030;InbreedingCoeff=0.2565;MQ=43.78;MQ0=1;MQRankSum=-1.269;QD=20.77;ReadPosRankSum=2.710;VQSLOD=4.6863;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,11:12:13.27:159,13,0	1/1:0,2:2:6.02:83,6,0	0/1:3,1:2:3.95:4,0,21	0/0:3,0:4:1.91:0,2,68	0/1:0,10:10:5.13:15,0,5	1/1:1,15:15:34:310,34,0	1/1:1,16:17:22.99:234,23,0	1/1:3,13:13:18.44:221,18,0	1/1:0,18:18:47.56:596,48,0	1/1:0,11:11:32.90:380,33,0	1/1:0,6:6:9.26:121,9,0	1/1:0,7:7:21.06:274,21,0	1/1:1,12:13:15.87:186,16,0	1/1:0,11:10:9.92:127,10,0	1/1:1,16:17:36.07:338,36,0	1/1:0,17:17:24.94:312,25,0	1/1:0,15:15:18.06:244,18,0	1/1:0,3:3:3.01:42,3,0	1/1:1,13:13:24.34:441,24,0	1/1:1,12:13:8.81:194,9,0	1/1:0,10:9:2.96:19,3,0	1/1:0,9:9:23.45:243,23,0	1/1:0,6:6:9.92:124,10,0	1/1:1,7:8:4.26:45,4,0	1/1:1,11:12:33.52:411,34,0	1/1:0,22:22:63.10:800,63,0	1/1:0,20:20:36.59:484,37,0	1/1:0,2:2:5.51:50,6,0
chr10	7315398	.	A	ACT	444.86	PASS	AB=0.810;AC=17;AF=0.315;AN=54;BaseQRankSum=1.163;DP=279;FS=17.893;HRun=0;HaplotypeScore=118.5059;InbreedingCoeff=-0.2037;MQ=37.20;MQ0=1;MQRankSum=0.078;QD=2.32;ReadPosRankSum=1.049;VQSLOD=1.3127;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:4,3:7:3.90:61,4,0	0/0:1,0:1:2.84:0,3,14	1/1:2,0:1:0.47:1,0,0	0/0:2,0:2:1.82:0,2,5	0/1:6,4:10:0:0,0,0	0/1:11,4:15:69.93:83,0,70	0/1:13,3:16:7.89:8,0,107	0/1:6,7:11:8.22:23,0,8	0/1:13,3:16:91.93:92,0,119	0/1:5,4:9:52.27:58,0,52	0/0:4,2:6:5.62:0,6,29	0/1:4,3:7:6.09:68,0,6	0/0:12,0:12:7.40:0,7,39	./.	0/1:12,5:17:23.65:24,0,84	0/1:15,1:16:13.11:13,0,91	0/0:12,1:13:3.64:0,4,133	0/0:3,0:3:3.01:0,3,38	0/0:14,0:13:27.41:0,27,170	0/1:9,4:13:11.75:12,0,100	0/0:4,3:6:0:0,0,0	0/0:7,2:9:7.62:0,8,37	0/0:3,1:4:0.46:0,0,1	0/0:5,0:5:5.22:0,5,32	0/1:10,1:11:32.95:33,0,125	0/1:20,1:21:75.08:75,0,170	0/1:18,1:19:26.48:26,0,147	0/0:2,0:2:5.88:0,6,36
chr10	7316761	.	CTT	C	8157.37	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=1.816;DP=532;FS=0.595;HRun=13;HaplotypeScore=86.5831;InbreedingCoeff=0.9348;MQ=63.93;MQ0=2;MQRankSum=-1.556;QD=16.96;ReadPosRankSum=4.551;VQSLOD=4.2188;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:33:84.62:0,85,1096	1/1:0,3:4:11.94:104,12,0	0/0:10,0:6:14.29:0,14,120	0/0:6,0:6:5.55:0,6,66	1/1:3,19:23:53.25:487,53,0	1/1:2,0:19:41.13:178,41,0	1/1:2,0:21:33.24:159,33,0	1/1:8,12:20:35.94:343,36,0	1/1:4,0:19:25.71:124,26,0	1/1:3,28:31:80.41:759,80,0	1/1:1,14:16:26.89:361,27,0	1/1:0,12:12:23.94:233,24,0	1/1:3,11:14:29.93:290,30,0	1/1:2,12:14:29.79:273,30,0	1/1:2,14:16:42.05:407,42,0	1/1:4,0:14:19.18:83,19,0	1/1:2,0:23:54.88:237,55,0	1/1:1,22:22:48.02:457,48,0	1/1:5,0:20:31.12:154,31,0	1/1:5,0:22:41.10:178,41,0	1/1:4,24:28:57.03:553,57,0	1/1:4,17:21:43.30:432,43,0	1/1:7,20:27:53.99:524,54,0	1/1:6,15:22:47.74:448,48,0	1/1:3,0:22:38.41:166,38,0	1/1:1,11:13:26.95:311,27,0	1/1:5,17:22:51.06:494,51,0	1/1:1,14:15:42.06:403,42,0
chr10	7316773	.	TTA	T	848.27	PASS	AB=0.984;AC=21;AF=0.375;AN=56;BaseQRankSum=2.179;DP=535;FS=22.078;HRun=0;HaplotypeScore=111.6965;InbreedingCoeff=-0.0803;MQ=68.24;MQ0=2;MQRankSum=0.649;QD=2.59;ReadPosRankSum=5.528;VQSLOD=0.2373;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,102,1375	1/1:4,0:4:8.60:45,9,0	0/0:16,0:11:11.17:0,11,196	0/1:7,0:7:11.60:30,0,12	0/1:23,0:23:42.97:83,0,43	0/0:18,0:18:37.08:0,37,145	0/0:23,0:23:39.41:0,39,191	0/1:18,1:19:36.37:36,0,97	0/0:15,0:15:18.38:0,18,77	0/1:29,0:29:1.33:68,0,1	0/1:17,0:17:25.11:34,0,25	0/1:16,0:16:26.08:26,0,70	0/1:12,1:13:0.37:79,0,0	0/1:14,0:14:8.94:49,0,9	0/1:16,1:17:18.11:60,0,18	0/0:13,0:13:22.67:0,23,107	0/0:27,0:27:51.70:0,52,260	0/1:26,0:25:29.11:55,0,29	0/0:19,0:19:12.66:0,13,98	0/0:22,0:22:50.10:0,50,228	0/1:29,0:29:49.48:49,0,73	0/1:20,0:20:46.47:46,0,52	0/1:23,0:23:40.16:79,0,40	0/1:21,0:21:35.59:36,0,81	0/0:19,0:19:29.67:0,30,104	1/1:13,0:13:2.91:53,3,0	1/1:19,0:19:13.77:86,14,0	0/1:16,1:17:7.96:102,0,8
chr10	7316959	.	AC	A	17206.40	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=14.085;DP=668;FS=0.000;HRun=2;HaplotypeScore=113.2976;InbreedingCoeff=0.9936;MQ=90.22;MQ0=0;MQRankSum=-5.686;QD=34.28;ReadPosRankSum=1.435;VQSLOD=4.5138;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,141,2110	1/1:0,8:8:24.08:297,24,0	0/0:27,0:28:12.31:0,12,928	0/0:23,0:23:66.14:0,66,908	1/1:0,24:24:66.21:818,66,0	1/1:1,19:20:54.17:669,54,0	1/1:1,24:25:69.22:855,69,0	1/1:1,28:29:84.21:982,84,0	1/1:0,26:26:72.23:892,72,0	1/1:1,27:28:81.25:995,81,0	1/1:0,20:20:57.15:690,57,0	1/1:1,21:22:60.19:744,60,0	1/1:0,21:21:60.19:742,60,0	1/1:0,19:19:54.17:669,54,0	1/1:3,23:26:75.21:904,75,0	1/1:0,20:20:60.19:744,60,0	1/1:0,17:17:42.13:521,42,0	1/1:0,12:12:33.10:409,33,0	1/1:1,20:21:60.13:714,60,0	1/1:3,23:26:75.21:906,75,0	1/1:4,26:30:81.17:958,81,0	1/1:0,30:30:87.08:1021,87,0	1/1:1,29:30:78.25:967,78,0	1/1:0,27:27:75.24:930,75,0	1/1:0,21:21:63.20:780,63,0	0/0:25,0:25:75.25:0,75,1119	0/0:32,0:32:90.28:0,90,1306	0/0:11,0:11:33.11:0,33,487
chr10	7317201	.	AG	A	21211.84	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=4.580;DP=681;FS=0.466;HRun=2;HaplotypeScore=116.5146;InbreedingCoeff=0.9987;MQ=80.64;MQ0=0;MQRankSum=-4.899;QD=35.12;ReadPosRankSum=2.720;VQSLOD=4.5540;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,114,1705	1/1:0,9:9:27.09:351,27,0	0/0:19,0:20:42.42:0,42,666	0/0:17,0:17:38.75:0,39,575	1/1:1,28:29:75.24:973,75,0	1/1:0,20:20:54.18:701,54,0	1/1:0,23:23:63.16:799,63,0	1/1:0,38:38:99:1333,105,0	1/1:0,24:24:69.22:896,69,0	1/1:0,24:24:72.20:895,72,0	1/1:2,20:22:54.18:701,54,0	1/1:0,18:18:45.15:584,45,0	1/1:0,22:22:60.19:778,60,0	1/1:0,25:25:66.21:857,66,0	1/1:0,37:37:99:1324,102,0	1/1:0,19:19:48.16:623,48,0	1/1:0,28:28:75.24:973,75,0	1/1:0,17:17:51.16:657,51,0	1/1:0,11:11:33.09:413,33,0	1/1:1,27:28:78.25:1004,78,0	1/1:0,25:25:72.23:935,72,0	1/1:0,31:31:87.28:1129,87,0	1/1:2,35:37:99:1285,99,0	1/1:0,28:28:69.22:895,69,0	1/1:0,15:15:33.11:428,33,0	1/1:0,31:31:93.30:1201,93,0	1/1:1,34:35:90.28:1167,90,0	1/1:0,8:8:24.08:311,24,0
chr10	7317843	.	A	AT	9306.26	PASS	AB=0.929;AC=33;AF=0.589;AN=56;BaseQRankSum=-15.735;DP=631;FS=5.591;HRun=9;HaplotypeScore=76.5399;InbreedingCoeff=0.9593;MQ=73.35;MQ0=0;MQRankSum=-2.396;QD=23.99;ReadPosRankSum=-1.045;VQSLOD=5.2729;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:43,1:45:79.82:0,80,910	1/1:2,8:10:24.03:253,24,0	0/0:24,0:23:41.97:0,42,364	0/0:23,0:21:44.97:0,45,389	1/1:3,23:26:66.10:703,66,0	1/1:2,20:22:54.15:597,54,0	1/1:4,18:22:36.57:399,37,0	1/1:3,25:28:72.18:787,72,0	1/1:0,19:19:45.12:498,45,0	1/1:4,25:29:78.18:850,78,0	1/1:5,9:14:24.06:266,24,0	0/0:2,0:19:28.52:0,29,84	0/0:1,0:18:28.44:0,28,84	0/0:1,0:15:26.48:0,26,78	1/1:2,29:31:52.15:804,52,0	1/1:4,16:20:48.13:531,48,0	1/1:5,27:31:40.12:671,40,0	1/1:0,21:21:48.13:531,48,0	1/1:1,26:27:78.21:863,78,0	1/1:4,20:24:38.32:625,38,0	1/1:2,20:22:47.77:531,48,0	0/0:0,0:11:20.37:0,20,60	0/0:2,0:19:34.63:0,35,101	0/0:3,0:21:30.54:0,31,90	1/1:1,14:15:36.10:398,36,0	0/1:24,2:26:0.39:0,0,455	0/0:37,2:39:77.76:0,78,896	0/0:8,1:9:20.98:0,21,182
chr10	7319291	.	A	AACACAC	10252.76	PASS	AB=0.782;AC=29;AF=0.518;AN=56;BaseQRankSum=-8.963;DP=645;FS=8.848;HRun=0;HaplotypeScore=272.1587;InbreedingCoeff=0.2791;MQ=48.98;MQ0=10;MQRankSum=-6.438;QD=25.07;ReadPosRankSum=-1.054;VQSLOD=2.7073;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:3,0:29:72.18:0,72,969	1/1:4,3:8:15.02:340,15,0	0/0:42,0:16:0.62:0,1,70	0/0:37,0:23:16.91:0,17,269	1/1:15,8:27:27.07:653,27,0	1/1:4,10:15:36.05:982,36,0	0/1:15,6:23:5.88:735,0,6	1/1:32,0:29:41.84:381,42,0	1/1:9,3:14:14.30:379,14,0	1/1:34,6:44:92.90:1700,93,0	0/1:19,3:22:14.87:163,0,15	0/1:2,0:16:12.51:19,0,13	0/0:9,0:20:0.36:0,0,81	0/0:5,0:9:6.50:0,6,70	1/1:13,10:24:11.71:1223,12,0	1/1:11,6:22:36.12:942,36,0	0/1:3,0:5:28.07:28,0,46	0/1:8,0:8:61.49:61,0,64	1/1:13,1:13:21.03:350,21,0	0/1:22,10:35:6.27:1335,0,6	0/1:25,1:26:89.44:89,0,167	0/0:10,0:28:2.20:0,2,7	0/0:19,0:30:7.35:0,7,24	0/1:2,0:12:1.29:29,0,1	1/1:22,8:32:25.30:795,25,0	0/1:6,1:25:47.70:48,0,578	0/0:13,0:34:47.62:0,48,598	0/0:0,0:6:12.04:0,12,168
chr10	7319304	.	A	ATT	404.87	PASS	AB=0.888;AC=11;AF=0.196;AN=56;BaseQRankSum=3.421;DP=665;FS=16.009;HRun=0;HaplotypeScore=245.5404;InbreedingCoeff=0.1954;MQ=44.51;MQ0=13;MQRankSum=-5.682;QD=2.41;ReadPosRankSum=1.735;VQSLOD=1.2084;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:95.41:0,95,850	0/0:8,0:8:14.04:0,14,115	0/0:54,0:22:36.10:0,36,722	0/0:43,0:24:36.79:0,37,789	0/0:24,1:24:27.24:0,27,205	0/0:19,0:18:38.39:0,38,199	0/0:20,1:21:12.08:0,12,215	0/0:36,0:31:92.37:0,92,1247	0/0:13,0:13:14.11:0,14,59	0/0:37,0:37:97.88:0,98,1044	0/0:18,0:18:17.37:0,17,169	1/1:16,0:17:21.91:149,22,0	0/1:22,0:22:40.86:41,0,153	0/1:12,0:12:25.51:26,0,39	0/0:22,0:22:22.19:0,22,102	0/0:25,0:25:31.91:0,32,176	0/1:7,2:9:33.87:37,0,34	0/1:5,4:9:21.29:87,0,21	0/0:14,0:12:31.96:0,32,329	0/0:32,0:32:27.01:0,27,194	0/1:20,14:33:65.64:123,0,66	0/1:24,0:24:27.38:27,0,114	0/1:26,0:26:11.14:11,0,173	1/1:15,0:15:13.84:63,14,0	0/0:27,0:27:22.90:0,23,85	0/0:25,0:25:71.68:0,72,653	0/0:32,0:32:65.87:0,66,585	0/0:7,0:7:17.95:0,18,161
chr10	7319329	.	T	TCA	626.86	PASS	AB=0.713;AC=3;AF=0.054;AN=56;BaseQRankSum=3.972;DP=598;FS=32.029;HRun=0;HaplotypeScore=229.8641;InbreedingCoeff=-0.0667;MQ=47.66;MQ0=8;MQRankSum=-3.184;QD=9.79;ReadPosRankSum=0.382;VQSLOD=1.9503;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,120,1879	0/0:5,0:5:6.02:0,6,97	0/0:55,0:35:99:0,99,1402	0/0:45,0:30:57.19:0,57,986	0/0:17,1:18:11.95:0,12,119	0/0:16,0:16:22.34:0,22,308	0/0:19,1:20:30.02:0,30,431	0/0:32,0:30:84.29:0,84,1355	0/0:14,0:14:15.25:0,15,204	0/0:20,0:20:54.12:0,54,776	0/0:8,0:8:11.51:0,12,119	0/0:18,0:18:44.47:0,44,541	0/0:20,0:20:47.31:0,47,594	0/0:16,0:16:11.73:0,12,128	0/0:20,1:21:26.74:0,27,418	0/0:19,0:19:33.52:0,34,473	0/1:10,2:12:86.30:86,0,175	0/1:3,6:9:62.28:282,0,62	0/0:15,0:13:30.10:0,30,464	0/0:24,0:25:29.85:0,30,352	0/1:23,20:40:75.44:358,0,75	0/0:17,0:17:45.15:0,45,705	0/0:15,0:15:38.07:0,38,528	0/0:17,0:17:14.44:0,14,176	0/0:15,0:16:23.40:0,23,285	0/0:24,0:24:72.20:0,72,1056	0/0:25,0:25:69.21:0,69,1120	0/0:6,0:6:15.05:0,15,234
chr10	7319346	.	ACATAC	A	376.45	PASS	AB=0.982;AC=13;AF=0.241;AN=54;BaseQRankSum=9.609;DP=550;FS=33.758;HRun=0;HaplotypeScore=226.4510;InbreedingCoeff=-0.3260;MQ=47.91;MQ0=11;MQRankSum=-5.621;QD=1.80;ReadPosRankSum=0.427;VQSLOD=1.5182;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,126,3601	0/0:3,0:3:3.90:0,4,45	0/0:53,0:32:59.27:0,59,2077	0/0:52,0:34:75.44:0,75,2000	./.	0/1:13,0:13:74.83:75,0,192	0/0:15,0:15:23.10:0,23,392	0/0:23,0:23:54.12:0,54,1177	0/1:18,0:18:23.14:23,0,130	0/1:18,0:18:37.49:37,0,807	0/1:6,0:6:20.47:20,0,34	0/1:13,0:13:23.46:23,0,401	0/1:13,0:13:88.91:89,0,196	0/1:15,0:15:27.23:27,0,98	0/1:18,0:18:66.81:67,0,149	0/1:17,0:17:47.10:47,0,277	0/0:11,0:11:18.65:0,19,220	0/1:8,0:8:5.56:6,0,304	0/0:16,0:12:13.07:0,13,481	0/0:20,1:21:13.52:0,14,108	0/1:41,0:38:40.91:41,0,288	0/0:14,0:14:27.09:0,27,487	0/0:10,0:10:8.77:0,9,287	0/1:9,4:13:30.78:45,0,31	0/1:16,0:16:24.02:24,0,70	0/0:22,0:22:62.76:0,63,1915	0/0:29,0:29:77.97:0,78,2102	0/0:8,0:8:21.07:0,21,551
chr10	7319351	.	C	CCACACACATAGACATT	17622.10	PASS	AB=1.000;AC=43;AF=0.768;AN=56;BaseQRankSum=1.923;DP=643;FS=23.493;HRun=0;HaplotypeScore=319.7638;InbreedingCoeff=0.8553;MQ=45.70;MQ0=17;MQRankSum=-10.662;QD=41.86;ReadPosRankSum=-3.720;VQSLOD=2.4980;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,117,4671	1/1:5,0:5:8.86:246,9,0	0/0:61,0:31:63.04:0,63,1731	0/0:50,0:32:65.76:0,66,1707	1/1:22,0:22:7.51:89,8,0	1/1:8,6:15:23.95:690,24,0	1/1:13,0:14:23.92:741,24,0	1/1:25,0:24:42.10:1327,42,0	1/1:9,13:22:17.96:633,18,0	1/1:22,0:23:50.57:1484,51,0	1/1:12,0:13:17.93:280,18,0	1/1:15,3:18:27.01:999,27,0	1/1:17,1:18:45.02:1496,45,0	1/1:12,10:23:38.93:1305,39,0	1/1:17,3:20:35.80:1160,36,0	1/1:20,2:22:26.94:1098,27,0	1/1:12,1:14:30.10:1269,30,0	1/1:9,1:10:22.21:584,22,0	1/1:18,3:16:17.07:1480,17,0	1/1:24,0:26:38.63:851,39,0	1/1:42,1:40:11.53:796,12,0	1/1:18,0:19:23.90:339,24,0	1/1:12,0:14:19.10:281,19,0	0/1:15,0:15:40.77:41,0,47	1/1:18,0:19:20.38:432,20,0	0/0:26,0:27:61.82:0,62,2498	0/0:28,0:28:64.30:0,64,2241	0/0:8,0:8:13.17:0,13,316
chr10	7319358	.	C	CATAG	5210.09	PASS	AB=0.890;AC=24;AF=0.429;AN=56;BaseQRankSum=8.641;DP=669;FS=0.000;HRun=0;HaplotypeScore=280.2999;InbreedingCoeff=-0.3244;MQ=43.41;MQ0=29;MQRankSum=-8.736;QD=12.29;ReadPosRankSum=-0.044;VQSLOD=3.8906;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,126,2444	0/1:5,1:6:15.98:48,0,16	0/0:55,0:22:60.51:0,61,1087	0/0:52,0:28:49.60:0,50,1129	0/0:19,3:22:7.43:0,7,84	0/1:15,1:16:34.24:86,0,34	0/1:12,2:14:56.65:460,0,57	0/1:23,2:21:99:400,0,369	0/1:20,0:20:35.71:84,0,36	0/1:21,5:26:99:584,0,306	0/1:13,3:16:76.70:123,0,77	1/1:14,2:17:18.04:286,18,0	0/1:17,1:18:12.67:294,0,13	0/1:20,0:20:33.35:110,0,33	0/1:19,5:25:99:352,0,118	0/1:19,2:21:99:106,0,123	0/1:14,2:16:99:308,0,156	0/1:9,1:10:99:112,0,149	0/1:19,1:14:99:265,0,196	0/1:25,6:32:40.90:470,0,41	0/1:42,5:44:99:499,0,299	1/1:16,5:21:10.77:199,11,0	0/1:13,3:16:4.97:153,0,5	1/1:13,2:15:4.70:25,5,0	0/1:16,6:22:98.65:245,0,99	0/0:29,0:29:87.20:0,87,1565	0/0:27,0:27:70.42:0,70,1258	0/0:11,0:11:20.96:0,21,299
chr10	7319359	.	ACACT	A	1339.64	PASS	AB=0.972;AC=19;AF=0.339;AN=56;BaseQRankSum=8.699;DP=633;FS=2.629;HRun=0;HaplotypeScore=262.8752;InbreedingCoeff=-0.3767;MQ=43.95;MQ0=29;MQRankSum=-6.817;QD=4.00;ReadPosRankSum=-4.160;VQSLOD=1.3723;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,126,3255	0/1:6,0:6:28.94:29,0,31	0/0:56,0:21:47.26:0,47,1036	0/0:52,0:28:39.94:0,40,1201	0/0:19,1:20:5.60:0,6,117	0/1:14,0:14:30.96:31,0,57	0/1:11,0:12:99:124,0,123	0/0:24,0:20:17.33:0,17,724	0/1:19,0:19:16.04:16,0,95	0/1:24,0:23:45.01:45,0,638	0/1:16,0:16:78.78:79,0,116	0/1:15,1:16:42.72:105,0,43	0/1:15,0:16:99:109,0,101	0/1:20,0:20:5.80:6,0,224	0/1:24,0:24:99:144,0,202	0/1:19,0:20:35.20:35,0,235	0/1:15,0:15:8.69:9,0,334	0/1:10,1:11:54.70:55,0,243	0/0:19,0:13:35.76:0,36,605	0/1:25,0:25:27.53:141,0,28	0/1:40,4:41:99:297,0,219	1/1:21,0:21:9.97:111,10,0	0/1:16,0:16:56.92:57,0,57	0/0:15,0:15:2.11:0,2,19	0/1:15,1:16:99:108,0,111	0/0:29,0:29:83.95:0,84,2042	0/0:27,0:27:61.31:0,61,1452	0/0:9,0:9:15.05:0,15,308
chr10	7319360	.	C	CAG	654.59	PASS	AB=0.991;AC=22;AF=0.393;AN=56;BaseQRankSum=8.715;DP=636;FS=1.926;HRun=0;HaplotypeScore=261.1643;InbreedingCoeff=-0.2678;MQ=44.00;MQ0=29;MQRankSum=-7.043;QD=1.84;ReadPosRankSum=-2.928;VQSLOD=1.5679;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,126,1847	0/1:6,0:6:9.38:9,0,35	0/0:53,0:22:60.67:0,61,774	0/0:52,0:27:60.62:0,61,830	0/0:21,0:21:6.38:0,6,40	0/1:14,0:14:6.64:7,0,35	0/1:13,0:13:21.31:88,0,21	0/1:25,0:21:99:100,0,195	0/0:18,0:18:2.63:0,3,45	0/1:24,0:23:99:116,0,200	0/1:16,0:16:4.10:4,0,81	0/1:15,0:15:6.85:69,0,7	0/1:17,0:17:16.88:17,0,74	0/1:20,0:20:5.85:6,0,36	0/1:24,0:24:32.52:33,0,97	0/0:20,0:20:6.58:0,7,117	0/1:15,0:15:33.95:34,0,109	0/1:11,0:11:24.70:25,0,118	0/1:16,0:12:13.88:14,0,132	0/1:25,0:25:30.82:54,0,31	0/1:36,7:41:93.09:93,0,179	1/1:22,0:22:7.94:53,8,0	1/1:16,0:16:1.14:38,1,0	1/1:15,0:15:2.22:22,2,0	0/1:16,0:16:30.42:30,0,66	0/0:30,0:30:83.40:0,83,1132	0/0:26,0:26:64.36:0,64,893	0/0:9,0:9:15:0,15,162
chr10	7319362	.	C	CAT	309.40	PASS	AB=0.977;AC=15;AF=0.268;AN=56;BaseQRankSum=8.458;DP=637;FS=21.588;HRun=0;HaplotypeScore=257.7802;InbreedingCoeff=-0.1688;MQ=44.10;MQ0=32;MQRankSum=-7.058;QD=1.17;ReadPosRankSum=-2.061;VQSLOD=1.0533;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,129,1981	0/0:6,0:6:8.41:0,8,63	0/0:57,0:21:53.89:0,54,754	0/0:53,0:26:65.73:0,66,832	0/0:21,0:21:6.38:0,6,40	0/0:15,0:15:13.93:0,14,72	0/1:13,0:13:24.17:72,0,24	0/1:23,0:19:11.86:12,0,240	0/0:19,0:19:6.65:0,7,66	0/1:24,0:24:88.67:89,0,245	0/0:17,0:17:17.44:0,17,119	0/1:15,0:15:15.45:17,0,15	0/0:18,0:18:2.20:0,2,86	0/0:20,0:20:0.67:0,1,52	0/1:24,1:25:30.08:30,0,120	0/0:19,0:20:3.49:0,3,113	0/1:14,0:14:23.05:23,0,111	0/1:11,0:11:29.07:29,0,127	0/1:17,0:13:12.22:12,0,168	0/1:25,1:26:34.32:50,0,34	0/1:35,7:39:80.18:80,0,135	1/1:21,0:21:1.28:16,1,0	0/0:15,0:15:3.50:0,4,12	1/1:15,0:15:2.22:22,2,0	0/1:17,0:17:1.65:2,0,69	0/0:30,0:30:86.32:0,86,1223	0/0:25,0:25:64.36:0,64,927	0/0:10,0:10:14.99:0,15,169
chr10	7319376	.	TCA	T	1031.18	PASS	AB=0.809;AC=13;AF=0.232;AN=56;BaseQRankSum=9.851;DP=729;FS=8.023;HRun=0;HaplotypeScore=282.6476;InbreedingCoeff=-0.3058;MQ=42.02;MQ0=37;MQRankSum=-9.157;QD=3.09;ReadPosRankSum=-6.174;VQSLOD=-0.3189;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,111,1882	0/1:8,3:11:54.65:55,0,254	0/0:53,0:14:33.02:0,33,498	0/0:55,0:25:35.69:0,36,693	0/1:20,5:25:22.88:23,0,182	0/0:13,0:13:8.90:0,9,284	0/1:14,2:16:16.58:17,0,286	0/0:35,1:31:50.79:0,51,1344	0/0:20,0:20:9.70:0,10,312	0/1:13,12:24:99:402,0,438	0/1:13,7:20:87.40:87,0,469	0/1:18,0:18:3.50:3,0,172	0/0:25,1:26:15.07:0,15,682	0/0:21,0:21:5.87:0,6,238	0/1:25,4:29:15.14:15,0,631	0/1:22,3:25:41.83:42,0,612	0/0:17,1:18:2.77:0,3,626	0/0:13,0:13:34.15:0,34,529	0/0:20,0:15:42.13:0,42,688	0/1:22,11:32:87.97:88,0,339	0/1:56,1:54:1.15:1,0,723	0/1:12,14:27:81.18:144,0,81	0/1:10,10:20:26.43:206,0,26	0/0:11,6:17:8.26:0,8,143	0/1:20,8:28:92.55:93,0,328	0/0:25,1:26:32.62:0,33,1103	0/0:22,0:22:48.15:0,48,795	0/0:11,0:10:27.07:0,27,434
chr10	7319400	.	CCA	C	1125.88	PASS	AB=0.740;AC=8;AF=0.143;AN=56;BaseQRankSum=5.113;DP=937;FS=3.890;HRun=0;HaplotypeScore=325.4128;InbreedingCoeff=0.4297;MQ=47.46;MQ0=25;MQRankSum=-7.916;QD=7.26;ReadPosRankSum=-0.320;VQSLOD=2.8277;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,117,1912	0/0:17,0:17:48.12:0,48,761	0/0:59,0:19:45.93:0,46,720	0/0:60,0:29:74.99:0,75,1081	0/0:32,0:32:28.41:0,28,490	0/0:15,0:15:30.10:0,30,512	0/0:36,0:36:81:0,81,1227	0/0:73,0:68:99:0,178,2535	0/0:23,0:23:46.66:0,47,790	0/0:41,0:40:99:0,117,1778	0/0:30,0:30:59.57:0,60,929	1/1:5,14:19:18.20:234,18,0	0/1:11,25:36:99:599,0,113	1/1:6,17:23:21.02:256,21,0	0/0:35,1:36:43.93:0,44,1270	0/0:35,0:35:87:0,87,1409	0/0:24,0:24:60.20:0,60,993	0/0:17,0:17:45.15:0,45,745	0/0:30,1:30:81.22:0,81,1216	0/0:34,0:33:64.23:0,64,951	0/0:76,0:73:99:0,114,1982	0/1:18,14:32:99:105,0,430	0/1:20,6:26:5.97:6,0,319	0/1:16,3:19:25.04:70,0,25	0/0:34,0:34:77.12:0,77,1162	0/0:33,0:34:99:0,99,1661	0/0:19,0:19:42.12:0,42,678	0/0:12,0:10:30.10:0,30,514
chr10	7319416	.	T	TCA	17019.04	PASS	AB=0.710;AC=35;AF=0.625;AN=56;BaseQRankSum=-11.454;DP=1061;FS=4.042;HRun=0;HaplotypeScore=301.5700;InbreedingCoeff=0.1503;MQ=48.49;MQ0=15;MQRankSum=0.497;QD=19.45;ReadPosRankSum=-1.779;VQSLOD=4.3004;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:96.30:0,96,1201	0/1:4,10:20:24.30:469,0,24	0/0:53,0:18:14.98:0,15,183	0/0:62,0:33:31.14:0,31,463	1/1:7,21:38:25.80:443,26,0	1/1:5,10:15:30.10:494,30,0	0/1:4,24:42:52.23:624,0,52	0/1:41,17:91:99:1099,0,225	1/1:4,19:23:46.42:787,46,0	0/1:10,19:43:99:780,0,111	0/1:7,12:33:18.61:350,0,19	1/1:5,16:22:41.40:658,41,0	1/1:8,29:45:30.95:1276,31,0	1/1:8,16:24:11.24:670,11,0	1/1:4,35:45:10.68:1153,11,0	1/1:5,29:40:36.75:1141,37,0	1/1:4,21:27:56.72:890,57,0	1/1:2,17:19:37.03:778,37,0	1/1:20,15:39:12.66:813,13,0	0/1:5,18:36:70.54:491,0,71	1/1:18,62:83:99:1962,106,0	0/1:2,22:40:53.59:613,0,54	0/1:2,16:34:25.65:307,0,26	0/1:8,11:26:68.36:177,0,68	0/1:0,31:43:29.78:1030,0,30	0/1:32,2:35:15.65:16,0,867	0/0:18,0:18:51.12:0,51,630	0/0:13,0:12:30.09:0,30,375
chr10	7319790	.	AACAC	A	13392.18	PASS	AB=0.763;AC=50;AF=0.893;AN=56;BaseQRankSum=7.330;DP=824;FS=2.630;HRun=0;HaplotypeScore=207.6595;InbreedingCoeff=0.4688;MQ=50.49;MQ0=17;MQRankSum=-1.899;QD=18.42;ReadPosRankSum=3.560;VQSLOD=4.3464;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:58:99:0,107,2257	1/1:2,9:11:21.07:344,21,0	0/1:41,1:10:25.28:25,0,398	0/0:38,0:8:6.27:0,6,109	1/1:8,21:30:53.35:813,53,0	1/1:8,11:19:27.09:442,27,0	1/1:9,17:26:44.75:473,45,0	1/1:23,18:40:53.26:785,53,0	1/1:10,0:31:21.02:197,21,0	1/1:12,22:36:59.56:1061,60,0	1/1:4,12:16:26.96:411,27,0	1/1:8,0:39:38.78:363,39,0	1/1:9,0:36:51.06:474,51,0	1/1:14,0:38:42.05:391,42,0	1/1:7,28:36:81.16:1245,81,0	1/1:4,20:26:51.17:836,51,0	1/1:10,16:25:36.12:590,36,0	0/1:4,12:16:24.29:502,0,24	1/1:12,6:17:12.02:170,12,0	1/1:11,14:26:39.09:610,39,0	1/1:28,21:49:45.02:676,45,0	1/1:4,0:31:39.04:362,39,0	1/1:5,0:15:6.01:56,6,0	1/1:15,0:29:2.21:27,2,0	1/1:8,17:26:42.10:659,42,0	1/1:8,23:32:62.63:1143,63,0	1/1:8,14:22:42.14:688,42,0	1/1:6,2:8:3.01:49,3,0
chr10	7320632	.	A	ATT	14575.07	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-9.363;DP=556;FS=5.020;HRun=8;HaplotypeScore=60.8722;InbreedingCoeff=0.9916;MQ=72.06;MQ0=3;MQRankSum=-1.727;QD=33.82;ReadPosRankSum=0.827;VQSLOD=4.8264;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,102,1137	1/1:1,5:7:12.04:190,12,0	0/0:12,0:13:26.14:0,26,328	0/0:13,0:13:30.34:0,30,294	1/1:3,20:23:57.19:903,57,0	1/1:0,20:22:59.68:894,60,0	1/1:1,17:18:39.13:619,39,0	1/1:5,31:41:99:1563,108,0	1/1:0,14:15:35.61:532,36,0	1/1:0,22:22:63.16:926,63,0	1/1:1,22:25:70.61:970,71,0	1/1:2,17:19:42.14:667,42,0	1/1:3,19:22:54.18:856,54,0	1/1:2,19:21:51.17:810,51,0	1/1:2,10:12:24.08:381,24,0	1/1:2,12:14:30.10:476,30,0	1/1:3,19:23:56.68:866,57,0	1/1:4,13:16:30.10:476,30,0	1/1:5,12:17:36.11:551,36,0	1/1:2,23:24:57.19:887,57,0	1/1:0,9:9:21.07:333,21,0	1/1:4,16:22:54.09:781,54,0	1/1:2,0:24:54.77:189,55,0	1/1:1,0:12:24.95:86,25,0	1/1:1,19:20:39.13:619,39,0	0/0:19,0:19:42.09:0,42,461	0/0:27,0:27:72.18:0,72,802	0/0:16,0:16:39.09:0,39,425
chr10	7320963	.	CTG	C	1773.77	PASS	AB=0.878;AC=21;AF=0.375;AN=56;BaseQRankSum=5.643;DP=690;FS=12.024;HRun=0;HaplotypeScore=118.3045;InbreedingCoeff=0.1667;MQ=53.79;MQ0=18;MQRankSum=4.646;QD=4.87;ReadPosRankSum=3.497;VQSLOD=2.1621;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:18,4:20:41.29:41,0,296	0/1:12,0:12:4.13:4,0,359	0/0:39,0:21:6.02:0,6,88	0/0:51,0:18:6.02:0,6,74	0/1:16,4:21:38.26:38,0,339	0/1:13,2:16:52.60:53,0,261	0/1:22,2:24:41.32:41,0,274	0/1:25,1:26:17.93:18,0,374	0/1:21,0:21:1.08:1,0,428	0/1:30,3:34:36.39:36,0,782	0/0:31,2:33:30.98:0,31,786	1/1:6,9:17:20.56:199,21,0	1/1:5,12:18:30.09:342,30,0	1/1:9,9:22:32.38:281,32,0	0/0:23,0:23:30.09:0,30,439	0/0:19,0:18:30.10:0,30,452	0/0:21,0:21:26.68:0,27,373	0/0:15,0:14:20.87:0,21,298	0/0:22,0:21:20.80:0,21,267	0/1:29,3:31:24.05:24,0,497	0/0:27,2:28:7.89:0,8,520	1/1:7,17:26:32.49:355,32,0	0/1:10,17:29:44.86:306,0,45	1/1:8,10:18:15.04:171,15,0	0/1:20,4:24:47.39:47,0,339	0/0:25,0:29:41.59:0,42,357	0/0:20,0:26:26.86:0,27,213	0/0:15,0:19:14.90:0,15,120
chr10	7321403	.	C	CCCACCCAT	11966.73	PASS	AB=0.830;AC=40;AF=0.714;AN=56;BaseQRankSum=2.852;DP=747;FS=2.468;HRun=0;HaplotypeScore=189.9143;InbreedingCoeff=0.2678;MQ=62.86;MQ0=7;MQRankSum=-6.154;QD=18.73;ReadPosRankSum=-2.191;VQSLOD=4.2552;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,103,1446	1/1:1,9:12:6.02:264,6,0	0/0:31,0:23:59.13:0,59,610	0/0:18,0:11:26.74:0,27,248	1/1:2,20:30:34.97:239,35,0	1/1:23,0:23:65.90:734,66,0	1/1:20,0:20:43.06:374,43,0	1/1:34,0:32:68.65:639,69,0	1/1:2,2:41:24.08:912,24,0	1/1:23,0:23:68.82:958,69,0	1/1:0,20:27:14.88:282,15,0	0/1:11,0:29:57.61:58,0,195	0/1:17,0:31:99:159,0,303	0/1:14,0:32:99:374,0,287	1/1:2,18:24:15.05:579,15,0	1/1:30,0:30:84.10:1347,84,0	1/1:24,0:24:49.16:705,49,0	1/1:8,0:12:23.87:213,24,0	1/1:25,0:25:71.95:1112,72,0	1/1:15,0:15:33.81:428,34,0	1/1:41,0:40:78.77:1083,79,0	0/1:16,0:29:99:118,0,326	0/1:25,0:25:94.72:95,0,203	0/0:9,0:18:8.02:0,8,89	1/1:22,0:22:56.60:599,57,0	0/1:37,0:36:99:334,0,407	0/1:44,0:44:99:256,0,504	0/1:8,0:8:46.18:108,0,46
chr10	7321412	.	C	CCATCCATCCATC	7580.24	PASS	AB=1.000;AC=49;AF=0.942;AN=52;BaseQRankSum=3.831;DP=747;FS=3.785;HRun=0;HaplotypeScore=240.6943;InbreedingCoeff=0.3431;MQ=57.49;MQ0=18;MQRankSum=-3.205;QD=11.45;ReadPosRankSum=0.258;VQSLOD=3.8055;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:38.20:0,38,948	1/1:8,0:8:6.49:144,6,0	./.	./.	1/1:27,0:27:5.95:54,6,0	1/1:26,0:26:21.05:291,21,0	1/1:23,0:23:12.74:86,13,0	0/1:31,0:27:5.29:38,0,5	1/1:40,0:40:23.92:1313,24,0	1/1:25,0:24:27.37:266,27,0	1/1:25,0:25:9.03:149,9,0	1/1:27,0:27:6.49:320,6,0	1/1:31,0:31:6.02:248,6,0	1/1:31,0:31:15.05:866,15,0	1/1:27,0:26:15.05:307,15,0	1/1:28,0:28:47.82:564,48,0	1/1:25,0:25:11.84:106,12,0	1/1:13,0:13:3.01:46,3,0	1/1:27,0:22:26.92:269,27,0	1/1:15,0:15:17.91:173,18,0	1/1:44,0:43:32.52:365,33,0	1/1:32,0:32:5.69:346,6,0	1/1:19,7:27:8.24:218,8,0	1/1:21,0:21:3.01:174,3,0	1/1:20,0:20:21.26:164,21,0	1/1:40,0:39:38.52:543,39,0	1/1:40,0:39:42.22:398,42,0	1/1:9,0:9:12:136,12,0
chr10	7323295	.	G	GTCC	15287.52	PASS	AB=0.655;AC=42;AF=0.750;AN=56;BaseQRankSum=14.850;DP=600;FS=2.420;HRun=0;HaplotypeScore=213.0119;InbreedingCoeff=0.7798;MQ=74.67;MQ0=0;MQRankSum=-16.304;QD=34.43;ReadPosRankSum=3.395;VQSLOD=4.9601;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,147,2645	1/1:1,10:11:33.04:527,33,0	0/0:19,0:19:44.29:0,44,795	0/0:26,0:26:72.21:0,72,1214	0/1:8,10:17:3.08:379,0,3	1/1:5,17:22:59.72:920,60,0	1/1:6,15:21:59.79:763,60,0	1/1:17,11:28:41.92:885,42,0	1/1:8,15:23:63.73:899,64,0	1/1:11,16:27:31.32:938,31,0	1/1:7,16:23:22.15:642,22,0	1/1:6,13:19:50.95:730,51,0	1/1:7,21:28:78.08:1183,78,0	1/1:9,13:22:59.89:818,60,0	1/1:7,13:20:31.67:715,32,0	1/1:4,11:15:44.94:637,45,0	0/1:6,6:12:19.09:294,0,19	1/1:6,6:12:3.33:297,3,0	1/1:7,6:13:36:460,36,0	1/1:13,28:41:21.97:1315,22,0	1/1:8,9:17:29.61:364,30,0	1/1:7,19:26:47.70:942,48,0	1/1:5,7:12:21.07:353,21,0	1/1:4,10:14:30:441,30,0	1/1:6,14:20:53.16:786,53,0	0/0:20,1:21:10.56:0,11,1003	0/0:37,0:37:99:0,111,1980	0/0:2,0:2:6.02:0,6,112
chr10	7323297	.	C	CTTGTT	29492.78	PASS	AB=0.701;AC=38;AF=0.679;AN=56;BaseQRankSum=15.240;DP=670;FS=0.000;HRun=0;HaplotypeScore=252.5117;InbreedingCoeff=0.3628;MQ=71.37;MQ0=0;MQRankSum=-16.943;QD=55.33;ReadPosRankSum=4.071;VQSLOD=4.9823;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,154,3507	1/1:1,10:11:33.11:820,33,0	0/0:19,0:19:45.16:0,45,1088	0/0:26,0:26:72.25:0,72,1593	0/1:13,10:22:24.77:951,0,25	0/1:7,17:24:9.09:1498,0,9	1/1:12,15:27:45.99:1749,46,0	0/1:18,11:29:4.24:1724,0,4	1/1:13,15:28:26.13:1675,26,0	1/1:13,16:29:56.01:1892,56,0	1/1:11,17:28:18.18:1322,18,0	1/1:15,13:28:29.91:1566,30,0	1/1:10,21:32:92.76:2184,93,0	1/1:9,13:22:29.71:1224,30,0	1/1:10,13:23:58.83:1386,59,0	0/1:6,11:17:31.51:927,0,32	1/1:8,6:14:38.62:856,39,0	1/1:7,6:13:9.12:617,9,0	0/1:8,6:14:25.86:721,0,26	1/1:15,28:43:45.89:2328,46,0	0/1:12,9:21:19.44:1067,0,19	1/1:11,18:30:58.16:1846,58,0	1/1:7,7:14:28.22:740,28,0	1/1:6,10:16:9.52:885,10,0	0/1:10,14:24:1.89:1500,0,2	0/1:22,1:23:15.40:15,0,1327	0/0:37,0:37:99:0,111,2538	0/0:2,0:2:6.02:0,6,140
chr10	7323820	.	AT	A	11012.32	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=11.156;DP=557;FS=9.322;HRun=8;HaplotypeScore=93.6261;InbreedingCoeff=0.9927;MQ=83.74;MQ0=0;MQRankSum=-2.358;QD=24.97;ReadPosRankSum=3.450;VQSLOD=5.0152;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:66.15:0,66,759	1/1:0,9:9:27.04:261,27,0	0/0:12,1:13:23.41:0,23,269	0/0:22,0:22:45.10:0,45,509	1/1:1,23:24:63.09:608,63,0	1/1:2,14:16:39.06:377,39,0	1/1:1,17:18:45.07:435,45,0	1/1:4,30:34:90.09:855,90,0	1/1:6,17:23:54.08:521,54,0	1/1:4,30:34:90.14:869,90,0	1/1:1,18:19:54.09:521,54,0	1/1:4,21:25:57.09:551,57,0	1/1:1,19:20:54.09:522,54,0	1/1:3,12:15:33.05:318,33,0	1/1:0,20:20:57.09:550,57,0	1/1:0,17:17:48.08:464,48,0	1/1:4,16:20:48.07:463,48,0	1/1:2,10:12:27.03:260,27,0	1/1:4,12:16:36.05:348,36,0	1/1:1,20:21:60.05:570,60,0	1/1:2,25:27:72.11:695,72,0	1/1:0,15:15:42.07:406,42,0	1/1:2,15:17:42.07:405,42,0	1/1:1,4:5:12.02:116,12,0	1/1:2,32:34:93.15:898,93,0	0/0:27,0:27:72.22:0,72,870	0/0:21,0:21:60.18:0,60,725	0/0:11,0:11:33.09:0,33,388
chr10	7324202	.	G	GTTTTT	6982.53	PASS	AB=0.670;AC=48;AF=0.857;AN=56;BaseQRankSum=-1.357;DP=535;FS=2.033;HRun=13;HaplotypeScore=140.1047;InbreedingCoeff=0.3980;MQ=66.89;MQ0=0;MQRankSum=-0.074;QD=13.94;ReadPosRankSum=-4.534;VQSLOD=0.9185;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:24:39.88:0,40,544	1/1:3,0:10:11.05:86,11,0	0/1:9,0:11:0.68:1,0,178	0/0:9,0:10:9.94:0,10,127	0/1:6,0:29:34.56:158,0,35	1/1:2,0:15:25.08:162,25,0	1/1:1,0:4:3.01:40,3,0	1/1:12,0:32:57.57:476,58,0	1/1:11,0:16:31.46:321,31,0	1/1:8,0:28:39.46:392,39,0	1/1:7,0:28:50.95:347,51,0	1/1:9,0:14:12.04:215,12,0	1/1:23,0:24:42.96:737,43,0	1/1:12,0:12:12.04:223,12,0	1/1:8,0:21:2.60:72,3,0	1/1:8,0:21:14.04:96,14,0	1/1:17,0:22:7.94:134,8,0	1/1:3,0:18:24.21:119,24,0	1/1:9,0:16:28.87:381,29,0	1/1:5,0:27:56.89:807,57,0	1/1:9,0:11:25.26:240,25,0	1/1:4,5:11:20.97:301,21,0	1/1:11,0:18:12.04:227,12,0	1/1:9,4:18:9.03:195,9,0	0/1:2,0:24:8.20:168,0,8	1/1:11,0:26:50.76:639,51,0	1/1:13,0:36:36.65:417,37,0	0/1:4,0:8:27.07:27,0,36
chr10	7325060	.	AT	A	14631.31	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=0.509;DP=534;FS=16.991;HRun=2;HaplotypeScore=148.8814;InbreedingCoeff=0.9920;MQ=66.88;MQ0=0;MQRankSum=-4.964;QD=31.74;ReadPosRankSum=2.768;VQSLOD=2.9082;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:91.38:0,91,1435	1/1:0,9:9:21.01:252,21,0	0/0:18,0:18:28.72:0,29,544	0/0:14,0:14:30.48:0,30,370	1/1:0,19:19:48.05:578,48,0	1/1:1,18:19:48.16:616,48,0	1/1:0,24:24:69.22:881,69,0	1/1:1,30:31:80.82:912,81,0	1/1:1,12:13:30.10:385,30,0	1/1:1,17:18:48.56:578,49,0	1/1:1,15:16:48.14:602,48,0	1/1:1,17:17:45.08:556,45,0	1/1:0,17:17:45.06:552,45,0	1/1:0,19:19:54.17:693,54,0	1/1:0,22:22:54.11:671,54,0	1/1:3,18:21:56.86:681,57,0	1/1:0,16:16:36.12:462,36,0	1/1:0,21:21:51.17:659,51,0	1/1:0,17:17:51.10:611,51,0	1/1:0,28:28:80.72:860,81,0	1/1:1,12:13:33.02:404,33,0	1/1:1,16:17:50.85:563,51,0	1/1:1,20:21:45.15:579,45,0	1/1:1,19:20:45.08:556,45,0	1/1:0,13:13:30.10:388,30,0	1/1:1,24:25:63.17:781,63,0	1/1:0,18:17:48.15:616,48,0	1/1:0,6:6:15.05:193,15,0
chr10	7325225	.	ATAAC	A	2639.54	PASS	AB=0.829;AC=16;AF=0.286;AN=56;BaseQRankSum=0.040;DP=516;FS=11.012;HRun=0;HaplotypeScore=180.9133;InbreedingCoeff=0.7599;MQ=41.72;MQ0=4;MQRankSum=1.413;QD=14.66;ReadPosRankSum=0.379;VQSLOD=2.6173;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:18:45.58:0,46,805	1/1:1,4:6:12.03:168,12,0	0/0:19,0:14:7.27:0,7,127	0/0:18,0:13:8.82:0,9,144	1/1:14,10:24:29.60:466,30,0	0/0:21,0:21:39.13:0,39,884	0/0:12,0:12:18.06:0,18,390	1/1:39,0:37:12.03:162,12,0	0/0:16,0:16:15.05:0,15,348	1/1:11,12:23:36.12:561,36,0	1/1:5,22:26:57.19:887,57,0	0/0:17,0:14:27.09:0,27,533	0/0:13,0:13:27.09:0,27,617	0/0:16,0:16:42.14:0,42,937	1/1:11,7:18:12.04:187,12,0	0/0:14,0:28:30.07:0,30,491	0/0:15,0:15:21.07:0,21,461	0/1:4,3:7:32.54:120,0,33	0/0:16,0:16:6.02:0,6,141	0/0:23,0:23:42.14:0,42,971	1/1:6,7:13:15.05:234,15,0	0/0:13,0:13:33.11:0,33,778	0/0:18,0:18:24.55:0,25,561	0/0:19,0:19:25.33:0,25,529	0/0:25,0:25:60.20:0,60,1343	0/1:14,1:23:51.29:51,0,586	0/0:6,0:16:23.94:0,24,352	0/0:5,0:10:15.05:0,15,262
chr10	7326553	.	TC	T	11121.11	PASS	AB=0.909;AC=29;AF=0.518;AN=56;BaseQRankSum=3.340;DP=646;FS=4.325;HRun=1;HaplotypeScore=72.6659;InbreedingCoeff=0.9198;MQ=82.19;MQ0=0;MQRankSum=-0.960;QD=34.75;ReadPosRankSum=2.226;VQSLOD=5.0715;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,126,2011	1/1:0,4:4:8.98:103,9,0	0/0:31,0:30:87.77:0,88,1391	0/0:22,0:21:59.11:0,59,850	1/1:0,31:31:84.28:1168,84,0	0/0:35,0:35:99:0,102,1604	0/0:30,0:30:90.29:0,90,1416	1/1:0,26:26:75.21:998,75,0	0/0:17,0:17:51.16:0,51,792	1/1:0,34:34:99:1367,99,0	1/1:0,20:20:51.17:695,51,0	1/1:0,13:13:36.12:503,36,0	1/1:0,25:25:69.23:965,69,0	1/1:0,16:16:45.15:629,45,0	1/1:0,20:20:54.18:755,54,0	0/0:21,0:21:63.21:0,63,1004	0/0:22,0:22:66.20:0,66,1027	1/1:0,9:9:21.07:290,21,0	0/0:28,0:28:84.27:0,84,1297	0/0:17,0:17:51.17:0,51,801	1/1:0,26:26:69.23:965,69,0	1/1:0,16:16:42.14:587,42,0	1/1:0,22:22:66.22:923,66,0	1/1:0,28:28:81.27:1133,81,0	0/0:20,0:20:60.20:0,60,958	0/1:27,3:30:38.61:39,0,1159	0/0:31,0:31:90.28:0,90,1390	0/0:10,0:10:30.07:0,30,433
chr10	7326884	.	TTGTGTGTGTG	T	4498.48	PASS	AB=1.000;AC=22;AF=0.407;AN=54;BaseQRankSum=5.101;DP=463;FS=12.915;HRun=0;HaplotypeScore=152.4385;InbreedingCoeff=0.3981;MQ=55.42;MQ0=4;MQRankSum=-7.706;QD=20.83;ReadPosRankSum=-0.133;VQSLOD=3.0965;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:39:57.58:0,58,1545	0/1:7,0:7:27.87:116,0,28	0/0:21,0:10:3.01:0,3,42	./.	0/1:25,0:25:66.85:378,0,67	1/1:5,6:11:11.78:359,12,0	1/1:11,2:13:9.03:200,9,0	0/0:26,0:25:16.51:0,17,156	1/1:7,4:11:24.04:482,24,0	0/1:15,0:15:75.06:177,0,75	0/1:15,0:15:16.99:390,0,17	0/0:9,0:10:12.04:0,12,359	0/0:11,0:10:21.07:0,21,871	0/0:10,0:10:9.03:0,9,438	1/1:17,0:17:7.24:574,7,0	1/1:12,6:18:20.55:616,21,0	0/0:23,0:27:24.91:0,25,158	0/1:11,0:11:54.19:54,0,57	1/1:14,1:15:0.75:109,1,0	1/1:6,3:9:15.51:339,16,0	0/1:28,0:27:13.23:13,0,84	0/0:14,0:14:20.54:0,21,765	0/0:13,0:13:18.05:0,18,607	0/0:21,0:21:36.56:0,37,1101	1/1:15,5:21:5.13:691,5,0	0/0:14,0:21:39.09:0,39,1012	0/0:5,0:7:6.02:0,6,181	0/0:8,0:10:12.02:0,12,212
chr10	7326912	.	GTGTGTGTGTGTGTA	G	3166.84	PASS	AB=0.994;AC=21;AF=0.375;AN=56;BaseQRankSum=8.783;DP=477;FS=8.475;HRun=0;HaplotypeScore=201.7808;InbreedingCoeff=-0.3017;MQ=49.71;MQ0=14;MQRankSum=-5.448;QD=10.42;ReadPosRankSum=1.327;VQSLOD=1.6933;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:29:66.62:0,67,2619	0/1:9,0:8:3.77:177,0,4	0/0:21,0:5:11.93:0,12,95	0/0:22,0:7:8.63:0,9,105	1/1:15,4:19:0.99:770,1,0	0/1:13,0:12:10.43:10,0,171	0/1:14,0:13:1.55:2,0,244	0/1:16,0:15:15.93:154,0,16	0/1:14,0:14:16.37:16,0,125	0/1:18,1:19:28.46:370,0,28	0/1:15,1:16:14.78:429,0,15	0/1:12,0:12:20.88:21,0,747	0/1:12,0:11:12.85:13,0,1289	0/1:12,0:12:51:51,0,616	1/1:16,3:19:30.17:930,30,0	0/1:14,0:14:43.09:43,0,100	0/0:25,0:25:53.96:0,54,935	0/1:11,0:11:25.18:91,0,25	0/0:7,0:7:10.63:0,11,150	0/0:13,0:13:4.85:0,5,458	0/1:28,0:27:63.64:102,0,64	0/1:16,0:16:37.05:37,0,882	0/1:20,0:20:34.58:35,0,1182	0/1:23,0:23:19.89:20,0,1504	0/1:17,0:17:57.55:58,0,145	0/0:30,0:30:78.19:0,78,2999	0/0:7,0:7:14.92:0,15,441	0/0:16,0:14:27.03:0,27,708
chr10	7326914	.	GTGTGTGTGTGTA	G	5452.42	PASS	AB=0.972;AC=28;AF=0.500;AN=56;BaseQRankSum=6.536;DP=469;FS=2.165;HRun=0;HaplotypeScore=177.3496;InbreedingCoeff=0.0073;MQ=49.97;MQ0=13;MQRankSum=-4.952;QD=17.04;ReadPosRankSum=0.813;VQSLOD=4.1388;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:31:69.49:0,69,2145	1/1:7,2:8:20.36:343,20,0	0/0:22,0:6:14.93:0,15,120	0/0:20,0:6:8.63:0,9,105	1/1:17,2:19:21.07:760,21,0	0/1:13,0:12:99:102,0,116	0/1:15,0:14:88.90:89,0,138	0/1:6,11:16:5.61:139,0,6	0/1:14,0:14:52.23:148,0,52	1/1:15,2:17:47.49:635,47,0	1/1:11,4:15:29.80:691,30,0	0/1:12,0:12:20.88:21,0,627	0/1:12,0:11:12.85:13,0,1069	0/1:13,0:13:92.97:93,0,511	1/1:13,6:19:54.05:1171,54,0	0/1:14,0:14:60.27:206,0,60	0/0:22,0:22:53.74:0,54,684	1/1:10,1:11:20.87:253,21,0	0/1:7,0:7:15.70:16,0,91	0/1:13,0:13:67.90:68,0,249	1/1:25,1:25:26.86:318,27,0	0/1:16,0:16:43:43,0,711	0/1:20,0:20:72.74:73,0,968	0/1:23,0:23:26.42:26,0,1121	0/1:15,0:15:90.41:245,0,90	0/0:29,0:29:30.17:0,30,2495	0/0:8,0:8:17.84:0,18,383	0/0:15,0:13:30.02:0,30,599
chr10	7326924	.	GTA	G	2715.22	PASS	AB=0.932;AC=26;AF=0.464;AN=56;BaseQRankSum=3.165;DP=442;FS=6.289;HRun=0;HaplotypeScore=113.5755;InbreedingCoeff=0.5006;MQ=53.32;MQ0=13;MQRankSum=0.304;QD=11.04;ReadPosRankSum=-1.822;VQSLOD=2.8231;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:27,2:27:7.61:8,0,492	1/1:8,1:8:17.87:133,18,0	0/0:23,0:8:14.42:0,14,150	0/0:20,0:8:14.15:0,14,157	1/1:13,0:13:38.81:292,39,0	0/0:15,0:14:27.43:0,27,188	0/0:14,1:14:20.29:0,20,183	1/1:12,0:11:19.21:150,19,0	0/0:10,0:10:16.96:0,17,111	1/1:16,0:16:44.58:338,45,0	1/1:11,1:12:32.86:251,33,0	1/1:9,1:10:9.43:133,9,0	0/1:13,1:13:59.46:155,0,59	0/1:12,1:13:25.45:138,0,25	1/1:18,1:19:53.70:405,54,0	0/0:13,0:13:9.50:0,10,83	0/0:21,0:21:5.42:0,5,208	1/1:8,1:9:17.78:118,18,0	0/0:7,0:7:19.83:0,20,169	0/0:13,0:13:27.71:0,28,212	1/1:21,0:20:17.86:139,18,0	0/1:15,1:16:36.70:89,0,37	1/1:14,6:20:4.11:253,4,0	0/1:19,4:23:13.51:305,0,14	0/0:13,0:13:3.76:0,4,134	0/0:26,0:26:14.87:0,15,456	0/1:10,0:10:11.61:12,0,121	0/0:20,0:18:20.12:0,20,221
chr10	7326984	.	A	AT	13687.56	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=1.927;DP=460;FS=20.713;HRun=6;HaplotypeScore=89.4614;InbreedingCoeff=0.9945;MQ=71.41;MQ0=0;MQRankSum=-2.159;QD=33.47;ReadPosRankSum=2.442;VQSLOD=3.1388;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:78.13:0,78,778	1/1:0,8:8:24.08:302,24,0	0/0:10,0:10:18.04:0,18,184	0/0:13,0:12:25.92:0,26,268	1/1:2,24:26:69.22:868,69,0	1/1:1,15:15:39.12:491,39,0	1/1:1,16:17:48.15:604,48,0	1/1:5,17:22:51.14:621,51,0	1/1:1,12:13:33.11:415,33,0	1/1:1,15:16:48.15:589,48,0	1/1:0,12:12:36.12:453,36,0	1/1:1,15:16:42.13:528,42,0	1/1:3,10:13:33.06:397,33,0	1/1:2,15:17:42.13:528,42,0	1/1:3,18:21:57.18:712,57,0	1/1:1,16:17:48.15:599,48,0	1/1:1,20:21:57.18:717,57,0	1/1:0,12:12:33.07:398,33,0	1/1:3,16:19:48.15:604,48,0	1/1:1,19:20:51.16:642,51,0	1/1:0,11:11:30.10:373,30,0	1/1:1,9:10:27.09:340,27,0	1/1:1,19:19:54.17:679,54,0	1/1:2,12:14:33.09:396,33,0	1/1:2,24:26:66.06:925,66,0	1/1:2,15:17:45.14:566,45,0	1/1:0,16:16:48.15:603,48,0	1/1:0,9:9:27.09:340,27,0
chr10	7327017	.	G	GT	2338.79	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-0.843;DP=433;FS=14.048;HRun=9;HaplotypeScore=119.5077;InbreedingCoeff=0.8971;MQ=68.52;MQ0=0;MQRankSum=-7.412;QD=21.66;ReadPosRankSum=-2.614;VQSLOD=1.9494;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:30:76.96:0,77,652	0/0:4,0:4:12:0,12,104	0/0:12,0:6:2.03:0,2,62	0/0:26,0:18:0.41:0,0,130	0/0:31,0:31:83.95:0,84,722	0/0:15,0:15:29.94:0,30,251	0/0:12,0:12:29.98:0,30,260	0/0:20,0:20:36.87:0,37,313	0/0:9,0:9:23.98:0,24,208	0/0:19,0:19:50.97:0,51,437	0/0:14,0:14:31.23:0,31,262	1/1:7,7:14:28.31:289,28,0	1/1:2,7:9:24.06:263,24,0	1/1:3,9:12:30.08:331,30,0	0/0:15,0:15:44.95:0,45,380	0/0:17,0:17:29.05:0,29,345	0/0:20,0:20:50.93:0,51,432	0/0:13,0:13:35.99:0,36,311	0/0:13,0:13:29.97:0,30,258	0/0:22,0:22:62.99:0,63,547	0/0:6,0:6:14.99:0,15,127	1/1:5,5:10:24.02:248,24,0	1/1:5,9:14:29.91:311,30,0	1/1:6,6:12:4.03:272,4,0	0/0:24,0:24:62.18:0,62,535	1/1:6,5:11:21.04:220,21,0	1/1:4,11:15:42.09:454,42,0	1/1:7,3:10:17.78:155,18,0
chr10	7327055	.	GAA	G	3600.13	PASS	AB=0.988;AC=50;AF=0.893;AN=56;BaseQRankSum=-1.145;DP=345;FS=6.278;HRun=3;HaplotypeScore=77.9425;InbreedingCoeff=0.3250;MQ=65.86;MQ0=17;MQRankSum=1.480;QD=12.20;ReadPosRankSum=3.001;VQSLOD=0.7114;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:34:3.43:0,3,483	1/1:6,0:6:1.08:42,1,0	0/0:12,0:6:1.92:0,2,58	0/1:39,0:16:2.64:3,0,51	1/1:19,0:18:41.92:342,42,0	1/1:12,0:12:16.69:146,17,0	1/1:6,0:6:12.87:101,13,0	1/1:5,0:5:0.14:59,0,0	1/1:3,0:3:1.86:29,2,0	1/1:10,0:10:3.86:183,4,0	1/1:10,1:10:20.83:159,21,0	1/1:3,0:3:5.66:38,6,0	1/1:12,0:12:17.70:119,18,0	1/1:7,0:7:8.86:58,9,0	1/1:6,2:8:14.98:124,15,0	1/1:14,2:15:35.88:287,36,0	1/1:20,1:21:47.62:352,48,0	1/1:10,1:11:22.21:200,22,0	1/1:14,0:13:24.19:295,24,0	1/1:12,2:13:17.84:157,18,0	1/1:11,0:10:10.39:91,10,0	0/1:9,0:8:0.86:99,0,1	1/1:3,0:3:5.99:50,6,0	1/1:8,1:8:11.95:91,12,0	1/1:17,0:16:22.46:210,22,0	1/1:12,0:12:16.38:227,16,0	1/1:8,0:8:10.73:75,11,0	1/1:8,0:4:8.94:65,9,0
chr10	7327201	.	TAA	T	6336.47	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=12.371;DP=550;FS=1.574;HRun=10;HaplotypeScore=77.6474;InbreedingCoeff=0.9376;MQ=76.60;MQ0=5;MQRankSum=0.011;QD=23.73;ReadPosRankSum=3.799;VQSLOD=4.6104;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,117,1651	1/1:1,6:7:15.03:167,15,0	0/1:18,0:16:6.66:7,0,255	0/0:17,0:15:19.84:0,20,244	1/1:2,19:21:51.13:563,51,0	0/0:23,0:23:57.17:0,57,847	0/0:22,0:22:66.16:0,66,989	1/1:4,23:27:69.16:759,69,0	0/0:16,0:16:38.92:0,39,583	1/1:2,26:28:78.21:869,78,0	1/1:1,10:11:30:317,30,0	1/1:1,17:18:42.11:468,42,0	1/1:0,16:15:33.09:368,33,0	1/1:0,12:12:30.08:333,30,0	1/1:2,19:21:51.13:568,51,0	0/0:19,0:19:48.16:0,48,762	0/0:32,0:33:86.78:0,87,1315	1/1:1,20:20:45.12:502,45,0	0/0:26,0:26:69.23:0,69,1056	0/0:16,0:16:42.14:0,42,636	1/1:3,14:17:36.09:401,36,0	1/1:4,8:12:24.06:263,24,0	1/1:3,12:14:30.08:334,30,0	1/1:0,21:21:26.94:418,27,0	0/0:22,0:22:51.17:0,51,793	0/0:15,0:18:47.45:0,47,556	0/0:14,0:14:39.13:0,39,599	0/0:14,0:14:39.13:0,39,611
chr10	7327597	.	GGAGAGA	G	99.09	PASS	AC=2;AF=0.040;AN=50;BaseQRankSum=1.398;DP=449;FS=19.123;HRun=0;HaplotypeScore=86.7907;InbreedingCoeff=0.3799;MQ=64.58;MQ0=5;MQRankSum=-2.369;QD=12.39;ReadPosRankSum=-0.397;VQSLOD=0.4708;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:19:3.01:0,3,65	0/0:7,0:7:0.89:0,1,2	0/0:29,0:17:0.47:0,0,1	./.	0/0:20,0:20:6.02:0,6,157	0/0:14,0:14:12.03:0,12,230	0/0:23,0:23:9.01:0,9,161	0/0:22,0:22:10.73:0,11,105	0/0:15,0:15:9.03:0,9,217	0/0:18,0:18:18.06:0,18,442	0/0:12,0:14:6.02:0,6,146	0/0:19,0:20:12.04:0,12,300	0/0:16,0:16:12.02:0,12,225	0/0:13,0:13:6.02:0,6,144	0/0:13,0:13:3.01:0,3,76	0/0:17,0:17:12.03:0,12,235	0/0:14,0:14:15.05:0,15,412	./.	0/0:20,0:20:12.04:0,12,318	0/0:18,0:18:15.05:0,15,390	0/0:14,0:13:12.04:0,12,281	0/0:9,0:9:0:0,0,0	0/0:7,0:7:3.01:0,3,42	0/0:21,0:19:3.01:0,3,78	0/0:10,0:9:9.02:0,9,211	./.	1/1:4,4:8:9.03:180,9,0	0/0:9,0:9:1.55:0,2,4
chr10	7328025	.	AT	A	1168.23	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.222;DP=550;FS=11.969;HRun=10;HaplotypeScore=57.2398;InbreedingCoeff=0.9395;MQ=71.41;MQ0=0;MQRankSum=-0.425;QD=17.18;ReadPosRankSum=2.651;VQSLOD=3.3662;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,1:34:67.05:0,67,907	0/0:11,0:11:30.07:0,30,324	0/0:10,1:10:14.71:0,15,125	0/0:6,0:6:8.94:0,9,71	0/0:28,0:31:86.86:0,87,911	0/0:23,0:23:66.18:0,66,730	0/0:10,0:10:27.07:0,27,299	0/0:33,0:34:81.04:0,81,869	0/0:14,0:14:42.11:0,42,465	0/0:22,0:24:62.84:0,63,659	0/0:35,2:37:67.15:0,67,949	0/0:11,0:12:35.93:0,36,379	0/0:14,1:15:16.02:0,16,386	0/0:18,1:20:27.91:0,28,511	0/0:16,1:17:19.06:0,19,432	0/0:9,0:10:23.90:0,24,247	0/0:27,0:27:72.17:0,72,785	0/0:10,0:10:27.54:0,28,300	0/0:20,0:20:54.11:0,54,577	0/0:26,0:26:63.14:0,63,678	0/0:3,0:3:9.02:0,9,100	0/0:21,0:21:51.14:0,51,564	0/0:27,0:27:72.19:0,72,789	0/0:17,0:17:51.14:0,51,564	0/0:22,0:22:54.15:0,54,597	1/1:5,27:32:47.76:639,48,0	1/1:6,17:23:14.80:357,15,0	1/1:0,13:13:35.99:313,36,0
chr10	7328455	.	T	TC	185.60	PASS	AC=22;AF=1.000;AN=22;DP=78;FS=0.000;HRun=3;HaplotypeScore=13.7012;InbreedingCoeff=-0.1107;MQ=45.93;MQ0=0;QD=3.44;VQSLOD=-0.1620;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,0:2:2.97:20,3,0	1/1:1,1:2:2.90:16,3,0	./.	./.	1/1:4,0:4:5.96:45,6,0	./.	./.	1/1:7,0:7:3:27,3,0	./.	1/1:6,0:6:3:29,3,0	./.	./.	./.	./.	./.	1/1:2,1:3:2.90:16,3,0	./.	./.	1/1:3,1:4:2.50:9,2,0	1/1:4,0:5:3:25,3,0	1/1:7,1:8:2.96:19,3,0	1/1:5,1:6:2.90:16,3,0	./.	./.	1/1:7,0:7:5.82:35,6,0	./.	./.	./.
chr10	7332083	.	CTCTGTCTGTCTG	C	1299.54	PASS	AB=0.847;AC=12;AF=0.214;AN=56;BaseQRankSum=0.729;DP=701;FS=10.036;HRun=0;HaplotypeScore=314.4401;InbreedingCoeff=0.5874;MQ=67.46;MQ0=2;MQRankSum=-4.307;QD=8.66;ReadPosRankSum=-1.752;VQSLOD=0.3773;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:35:54.18:0,54,1034	0/0:2,0:14:5.80:0,6,237	0/0:25,0:23:15.05:0,15,626	0/0:30,0:24:24.08:0,24,577	0/0:39,0:39:68.70:0,69,2758	0/0:16,7:23:3.07:0,3,9	1/1:7,6:13:3.01:100,3,0	0/0:37,0:37:42.14:0,42,1390	1/1:13,8:21:3.01:102,3,0	0/0:34,0:33:74.26:0,74,2833	0/0:27,0:27:39.13:0,39,1521	0/0:18,0:18:45.14:0,45,1041	0/0:25,0:25:54.18:0,54,1341	0/0:18,0:18:42.14:0,42,1529	0/0:30,0:30:49.28:0,49,2202	1/1:12,11:23:0.82:195,1,0	0/1:15,2:16:55.76:148,0,56	0/0:19,0:19:36.12:0,36,1454	1/1:11,6:17:21.07:455,21,0	1/1:10,21:31:12.04:263,12,0	0/0:32,0:32:54.15:0,54,2042	0/0:31,0:31:72.25:0,72,3420	0/0:32,0:31:58.07:0,58,1185	0/0:25,0:25:30.10:0,30,567	0/1:21,7:28:87.19:190,0,87	0/0:20,0:20:48.16:0,48,1789	0/0:23,0:22:30.10:0,30,1178	0/0:12,0:12:12.04:0,12,438
chr10	7332109	.	CTG	C	729.57	PASS	AB=0.931;AC=15;AF=0.268;AN=56;BaseQRankSum=6.346;DP=675;FS=1.138;HRun=0;HaplotypeScore=243.2177;InbreedingCoeff=0.2673;MQ=48.64;MQ0=9;MQRankSum=1.530;QD=2.81;ReadPosRankSum=3.121;VQSLOD=2.1859;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:35:3.11:0,3,121	0/0:13,0:13:5.76:0,6,107	0/0:9,0:7:15.05:0,15,273	0/0:14,0:9:23.75:0,24,362	0/0:37,0:36:69.69:0,70,1232	1/1:19,5:24:15.99:117,16,0	1/1:23,0:22:5.67:41,6,0	0/0:32,0:32:93.30:0,93,1453	1/1:12,6:18:8.49:69,8,0	0/0:39,0:35:77.37:0,77,1426	0/0:29,0:29:39.13:0,39,694	0/0:18,0:18:15.11:0,15,366	0/0:25,0:25:24.47:0,24,528	0/0:20,0:20:49.15:0,49,800	0/0:30,0:30:55.61:0,56,964	1/1:17,4:21:11.23:136,11,0	0/1:14,1:14:29.31:87,0,29	0/0:18,0:17:44.99:0,45,746	0/1:11,1:10:37.93:168,0,38	0/1:35,3:38:75.26:75,0,372	0/0:27,0:26:54.15:0,54,933	0/0:37,0:37:83.88:0,84,1456	0/1:29,0:28:3.07:3,0,196	0/1:27,0:27:22.34:22,0,89	0/1:12,7:19:95.58:96,0,159	0/1:34,0:33:83.37:83,0,832	0/0:21,0:20:1.68:0,2,519	0/0:9,0:9:14.26:0,14,223
chr10	7332113	.	CTGTCTG	C	1048.65	PASS	AB=0.954;AC=16;AF=0.286;AN=56;BaseQRankSum=7.794;DP=653;FS=2.970;HRun=0;HaplotypeScore=274.6016;InbreedingCoeff=0.2348;MQ=47.59;MQ0=9;MQRankSum=-4.204;QD=4.11;ReadPosRankSum=-2.539;VQSLOD=2.1343;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:35:19.35:0,19,230	0/1:13,0:13:24.47:24,0,124	0/0:6,0:5:12.04:0,12,349	0/0:11,0:8:4.11:0,4,161	0/0:36,0:35:63.03:0,63,1467	1/1:26,0:26:16.73:103,17,0	1/1:21,0:20:5.87:46,6,0	0/0:31,0:31:91.51:0,92,1613	1/1:19,0:19:10.59:99,11,0	0/1:35,0:31:37.55:38,0,1666	0/0:30,0:29:36:0,36,770	0/0:17,0:17:42.21:0,42,395	0/0:26,0:26:71.73:0,72,605	0/0:20,0:20:55.54:0,56,843	0/0:30,0:30:19.30:0,19,1180	1/1:18,0:18:10.31:166,10,0	0/1:12,0:11:18.14:18,0,19	0/0:18,0:17:9.59:0,10,771	0/1:10,1:9:12.57:131,0,13	0/1:33,2:35:41.34:125,0,41	0/0:24,0:23:18.65:0,19,1064	0/0:35,0:35:83.85:0,84,2215	0/0:30,0:29:31.71:0,32,322	0/0:25,0:25:15.68:0,16,138	0/1:16,7:23:65:206,0,65	0/1:33,0:32:99:250,0,877	0/0:21,0:20:34.82:0,35,554	0/1:9,0:9:16.97:17,0,234
chr10	7332117	.	CTG	C	1387.69	PASS	AB=0.998;AC=25;AF=0.446;AN=56;BaseQRankSum=4.655;DP=656;FS=0.000;HRun=0;HaplotypeScore=239.0191;InbreedingCoeff=0.1205;MQ=47.51;MQ0=9;MQRankSum=0.792;QD=3.32;ReadPosRankSum=-1.527;VQSLOD=2.3829;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:37,0:35:40.26:244,40,0	0/1:13,0:13:24.42:24,0,60	0/0:4,0:4:12.04:0,12,216	0/0:8,0:6:0.57:0,1,53	0/0:35,0:34:58.51:0,59,843	1/1:25,5:30:25.23:185,25,0	1/1:21,0:20:5.18:28,5,0	0/0:35,0:35:97.49:0,97,1356	1/1:13,6:19:10.58:88,11,0	0/1:33,0:29:60.45:60,0,966	0/0:27,0:26:30.08:0,30,443	0/1:17,0:17:30.93:35,0,31	0/1:25,0:25:19.90:20,0,95	0/0:20,0:20:20.76:0,21,379	0/0:31,0:31:19.28:0,19,660	1/1:17,4:21:13.24:166,13,0	1/1:11,0:10:5.16:29,5,0	0/0:18,0:17:9.53:0,10,483	0/1:13,0:11:39.81:40,0,87	0/1:36,1:37:52.10:54,0,52	0/0:23,0:22:15.61:0,16,599	0/0:37,0:37:86.95:0,87,1347	0/1:30,0:29:11.90:101,0,12	1/1:24,0:24:17.12:46,17,0	0/1:23,0:23:41.25:66,0,41	0/1:34,0:32:99:339,0,345	0/1:21,0:20:14.61:15,0,196	0/1:9,0:9:31.59:32,0,82
chr10	7332121	.	C	CTA	4115.99	PASS	AB=0.876;AC=33;AF=0.611;AN=54;BaseQRankSum=0.898;DP=685;FS=8.903;HRun=0;HaplotypeScore=244.1963;InbreedingCoeff=-0.0535;MQ=46.71;MQ0=8;MQRankSum=0.402;QD=7.17;ReadPosRankSum=-2.150;VQSLOD=1.8138;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:27,9:34:2.77:150,3,0	0/1:10,0:10:16.33:51,0,16	0/0:4,0:4:12.01:0,12,124	./.	0/0:26,8:33:31.35:0,31,326	1/1:32,0:32:36.04:411,36,0	1/1:21,1:21:8.09:87,8,0	0/1:52,0:52:99:477,0,1102	1/1:20,0:20:14.78:173,15,0	0/1:33,4:33:99:350,0,439	0/0:20,9:29:26.53:0,27,212	1/1:15,0:15:4.21:19,4,0	0/1:24,0:24:20.03:20,0,33	0/1:18,0:18:8.21:8,0,177	0/1:21,8:31:16.07:16,0,219	1/1:22,0:23:29.48:314,29,0	1/1:15,2:16:10.02:166,10,0	0/1:15,3:17:21.61:22,0,240	0/1:13,0:12:33.08:33,0,87	1/1:38,0:38:25.06:167,25,0	0/1:17,4:20:18.80:19,0,211	0/0:22,0:38:53.49:0,53,944	0/1:30,0:29:26.25:227,0,26	1/1:24,1:25:15.37:169,15,0	1/1:23,0:23:28.12:108,28,0	0/1:19,17:35:24.85:920,0,25	0/1:11,5:20:16.25:130,0,16	0/1:6,4:11:64.37:78,0,64
chr10	7335287	.	T	TGA	7827.60	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=3.661;DP=279;FS=31.203;HRun=0;HaplotypeScore=198.5821;InbreedingCoeff=0.5986;MQ=70.55;MQ0=9;MQRankSum=-7.450;QD=38.18;ReadPosRankSum=-0.868;VQSLOD=2.2911;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:81.28:0,81,1320	1/1:1,0:1:3.01:60,3,0	0/0:25,0:16:48.16:0,48,768	0/0:19,0:8:24.03:0,24,361	1/1:12,1:13:29.63:513,30,0	1/1:10,0:9:8.04:370,8,0	1/1:6,3:9:24.08:459,24,0	1/1:12,0:12:29.91:475,30,0	1/1:6,0:6:13.20:197,13,0	1/1:3,1:5:5.72:112,6,0	1/1:13,0:13:20.52:483,21,0	1/1:2,0:2:0.09:55,0,0	1/1:11,1:12:14.77:454,15,0	1/1:7,0:7:19.82:268,20,0	1/1:6,0:6:14.04:202,14,0	1/1:3,1:4:12.04:241,12,0	1/1:4,1:4:3.01:60,3,0	1/1:4,1:5:8.13:180,8,0	1/1:5,0:5:4.10:158,4,0	1/1:13,5:18:31.21:755,31,0	1/1:4,1:5:12.04:238,12,0	1/1:16,0:16:26.47:762,26,0	1/1:11,2:14:21.60:569,22,0	1/1:6,0:6:9.03:176,9,0	1/1:7,2:9:11.74:293,12,0	1/1:7,0:6:18.06:338,18,0	1/1:7,3:10:5.17:229,5,0	1/1:5,0:5:1.33:180,1,0
chr10	7336554	.	CTG	C	1664.55	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=-2.884;DP=541;FS=2.983;HRun=0;HaplotypeScore=100.9902;InbreedingCoeff=0.6552;MQ=57.25;MQ0=6;MQRankSum=5.342;QD=11.48;ReadPosRankSum=4.005;VQSLOD=3.6010;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:17,0:29:16.37:16,0,152	0/0:9,0:10:2.99:0,3,23	0/0:33,0:16:14.48:0,14,166	0/0:33,0:13:8.96:0,9,107	0/0:18,0:21:5.99:0,6,63	1/1:1,7:11:20.56:181,21,0	1/1:8,11:21:35.77:374,36,0	0/0:31,0:31:36.36:0,36,367	1/1:6,9:17:32.58:331,33,0	0/0:25,0:25:28.91:0,29,293	0/0:13,0:15:3:0,3,28	0/0:11,0:18:6:0,6,52	0/0:11,0:26:16.66:0,17,148	0/0:9,0:14:14.84:0,15,120	0/0:17,0:22:8.95:0,9,70	1/1:4,11:15:18.05:208,18,0	1/1:7,14:22:27.08:310,27,0	0/0:11,0:12:11.99:0,12,127	0/0:6,0:6:3.01:0,3,47	1/1:8,10:19:30.09:346,30,0	0/0:17,0:17:3.43:0,3,20	0/0:16,0:24:5.99:0,6,48	0/0:9,0:16:2.85:0,3,26	0/0:12,0:25:8.64:0,9,70	1/1:7,3:11:8.86:83,9,0	0/0:15,0:30:41.65:0,42,362	0/0:5,0:12:26.95:0,27,227	0/0:2,0:3:3:0,3,26
chr10	7336599	.	TGAGAGAGAGAGAGAGAGAGAGAGAGAGA	T	1696.72	PASS	AB=1.000;AC=7;AF=0.152;AN=46;BaseQRankSum=3.246;DP=442;FS=13.718;HRun=0;HaplotypeScore=225.4537;InbreedingCoeff=0.5756;MQ=45.98;MQ0=13;MQRankSum=-1.886;QD=23.90;ReadPosRankSum=0.519;VQSLOD=1.0304;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:21:27.56:0,28,2551	./.	0/0:29,0:13:2.80:0,3,13	0/1:28,0:9:5.22:5,0,29	./.	0/0:18,0:19:27.06:0,27,1271	0/0:33,0:32:34.47:0,34,2413	1/1:13,0:13:9.03:166,9,0	0/0:19,0:20:12.04:0,12,1007	1/1:10,8:19:3.68:1280,4,0	0/0:6,3:9:0.47:0,0,1	0/0:6,0:6:12.51:0,13,1107	0/0:22,0:19:15.88:0,16,641	0/0:15,0:15:21.07:0,21,2027	./.	0/0:14,0:17:30.99:0,31,2665	0/0:19,0:20:27.56:0,28,2502	1/1:4,7:11:6.02:361,6,0	0/0:12,0:11:24.08:0,24,1688	0/0:17,0:17:18.06:0,18,1154	./.	0/0:19,0:18:15.05:0,15,817	0/0:9,0:8:3.01:0,3,186	0/0:25,0:25:6.49:0,6,555	0/0:5,0:5:9.02:0,9,526	0/0:16,0:16:27.05:0,27,1320	0/0:10,0:12:24.08:0,24,1854	./.
chr10	7337660	.	ACT	A	6558.64	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=15.375;DP=778;FS=1.490;HRun=0;HaplotypeScore=90.4241;InbreedingCoeff=0.9998;MQ=73.57;MQ0=0;MQRankSum=1.330;QD=40.99;ReadPosRankSum=3.097;VQSLOD=6.5409;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,138,2665	0/0:12,0:12:33.11:0,33,637	0/0:12,0:12:33.11:0,33,591	0/0:12,0:12:33.02:0,33,481	0/0:28,0:28:84.27:0,84,1581	0/0:25,0:25:66.23:0,66,1254	0/0:21,0:21:63.22:0,63,1217	0/0:34,0:34:99:0,99,1843	0/0:40,0:40:99:0,120,2281	0/0:32,0:32:96.32:0,96,1820	0/0:23,0:23:69.24:0,69,1333	1/1:0,32:32:93.32:1424,93,0	1/1:0,34:34:93.32:1423,93,0	1/1:0,26:26:72.24:1103,72,0	0/0:34,0:34:99:0,99,1861	0/0:27,0:27:81.28:0,81,1550	0/0:29,0:29:87.28:0,87,1645	0/0:21,0:21:63.22:0,63,1217	0/0:31,0:31:93.31:0,93,1763	0/0:30,0:30:90.31:0,90,1721	0/0:51,0:51:99:0,150,2864	1/1:0,24:24:72.24:1103,72,0	1/1:1,20:21:51.17:781,51,0	1/1:0,23:23:48.16:725,48,0	0/0:25,0:25:75.26:0,75,1449	0/0:35,0:35:99:0,102,1938	0/0:33,0:33:99:0,99,1846	0/0:14,0:14:42.14:0,42,811
chr10	7338152	.	AT	A	5993.52	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=14.494;DP=651;FS=8.410;HRun=9;HaplotypeScore=76.2413;InbreedingCoeff=0.9972;MQ=82.84;MQ0=1;MQRankSum=-1.326;QD=16.38;ReadPosRankSum=2.818;VQSLOD=4.6763;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,99,1098	0/0:15,0:15:39.11:0,39,442	0/0:22,0:22:18.48:0,18,347	0/0:19,0:18:26.68:0,27,240	0/0:29,0:29:78.20:0,78,872	1/1:2,20:22:57.03:522,57,0	1/1:1,18:20:46.56:417,47,0	0/0:31,0:31:75.20:0,75,848	1/1:2,20:22:57.03:522,57,0	0/0:24,0:24:60.17:0,60,684	0/0:23,0:23:63.17:0,63,714	1/1:2,0:26:40.92:120,41,0	1/1:0,0:22:38.70:114,39,0	1/1:2,0:27:48.89:144,49,0	0/0:26,0:26:66.20:0,66,762	1/1:2,23:25:60.03:549,60,0	1/1:0,16:16:45.02:412,45,0	0/0:23,0:23:69.20:0,69,796	1/1:3,16:19:48:433,48,0	1/1:1,24:25:72:651,72,0	0/0:37,0:36:99:0,111,1252	1/1:2,0:13:20.37:60,20,0	1/1:4,0:17:22.34:66,22,0	1/1:2,0:30:52.96:156,53,0	1/1:2,14:16:39.02:357,39,0	1/1:3,20:23:28.41:511,28,0	1/1:2,32:34:81.04:741,81,0	1/1:0,8:8:24.01:220,24,0
chr10	7339593	.	TA	T	4802.78	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=10.689;DP=631;FS=0.368;HRun=2;HaplotypeScore=63.5882;InbreedingCoeff=0.9997;MQ=88.32;MQ0=0;MQRankSum=-3.415;QD=34.55;ReadPosRankSum=2.557;VQSLOD=5.1078;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:54.16:0,54,785	0/0:14,0:14:39.13:0,39,584	0/0:22,0:22:63.19:0,63,870	0/0:24,0:24:65.93:0,66,818	0/0:34,0:34:99:0,99,1463	0/0:26,0:26:72.18:0,72,1051	0/0:16,0:16:45.15:0,45,666	0/0:43,0:43:99:0,120,1702	0/0:23,0:23:66.19:0,66,948	0/0:35,0:35:99:0,102,1495	0/0:14,0:14:36.12:0,36,539	1/1:2,18:20:45.15:584,45,0	1/1:0,24:24:63.20:818,63,0	1/1:1,18:19:51.16:655,51,0	0/0:22,0:22:63.15:0,63,881	0/0:13,0:13:39.12:0,39,564	0/0:12,0:12:36.09:0,36,498	0/0:14,0:14:42.14:0,42,629	0/0:21,0:21:60.20:0,60,888	0/0:25,0:25:75.25:0,75,1124	0/0:25,0:25:72.21:0,72,1017	1/1:0,28:28:81.22:1032,81,0	1/1:0,26:26:75.24:974,75,0	1/1:0,22:22:57.19:740,57,0	0/0:22,0:22:66.22:0,66,989	0/0:23,0:23:63.20:0,63,909	0/0:36,0:36:99:0,108,1600	0/0:9,0:9:27.09:0,27,405
chr10	7339774	.	T	TACAC	4013.67	PASS	AB=0.766;AC=35;AF=0.673;AN=52;BaseQRankSum=-1.848;DP=771;FS=7.536;HRun=0;HaplotypeScore=188.0423;InbreedingCoeff=0.0290;MQ=60.38;MQ0=10;MQRankSum=-2.254;QD=6.65;ReadPosRankSum=-3.090;VQSLOD=1.2966;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:38:44.44:44,0,160	1/1:2,2:4:3.01:71,3,0	./.	./.	0/1:15,3:18:15.40:111,0,15	1/1:17,0:26:3.48:38,3,0	0/0:16,0:31:0.47:0,0,1	1/1:31,0:31:21.87:222,22,0	1/1:12,1:24:6.13:68,6,0	1/1:16,13:30:41.91:744,42,0	0/0:8,6:16:0.47:0,0,1	0/1:12,0:29:54.82:105,0,55	1/1:10,0:21:13.62:98,14,0	0/1:15,0:29:54.47:54,0,152	0/1:15,10:30:9.25:393,0,9	1/1:12,0:25:5.88:108,6,0	1/1:20,1:33:20.90:282,21,0	1/1:15,10:26:37.94:694,38,0	1/1:12,0:13:19.92:234,20,0	1/1:11,1:23:13.94:197,14,0	1/1:49,0:50:28.42:237,28,0	0/1:27,0:37:96.57:97,0,133	0/1:25,0:29:43.17:43,0,192	0/1:19,0:39:84.67:88,0,85	1/1:12,1:22:7.07:38,7,0	0/1:10,1:24:49:49,0,219	0/0:12,0:28:35.15:0,35,312	0/0:10,0:19:16.52:0,17,165
chr10	7340696	.	TG	T	3860.48	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=6.314;DP=622;FS=7.801;HRun=9;HaplotypeScore=86.6310;InbreedingCoeff=0.8877;MQ=76.79;MQ0=2;MQRankSum=0.463;QD=18.83;ReadPosRankSum=-1.595;VQSLOD=2.9514;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:2.88:0,3,503	1/1:0,12:12:36.02:329,36,0	0/0:30,1:27:36.48:0,36,373	0/1:30,0:23:47.41:47,0,101	1/1:6,20:26:63.02:576,63,0	0/0:22,0:22:60.18:0,60,690	0/0:17,0:17:39.12:0,39,450	1/1:5,21:26:62.96:561,63,0	0/0:18,0:18:51.14:0,51,579	1/1:6,24:30:71.99:646,72,0	1/1:6,19:25:57.01:520,57,0	0/0:31,0:31:75.22:0,75,865	0/0:16,0:16:42.12:0,42,485	0/0:20,0:20:51.15:0,51,586	1/1:2,23:25:57.03:522,57,0	0/0:19,0:19:47.89:0,48,515	0/0:18,0:18:24.88:0,25,449	1/1:3,13:16:36.01:329,36,0	0/0:17,0:18:41.98:0,42,454	0/0:28,0:28:57.14:0,57,638	1/1:3,12:15:36.02:329,36,0	0/0:27,0:27:66.18:0,66,752	0/0:18,0:18:54.13:0,54,601	0/0:17,0:17:51.15:0,51,589	0/0:20,0:20:45.12:0,45,510	0/0:27,0:27:69.19:0,69,786	0/0:29,0:29:75.20:0,75,845	0/0:16,0:16:33.10:0,33,381
chr10	7342028	.	AG	A	15592.72	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=14.506;DP=598;FS=1.717;HRun=4;HaplotypeScore=144.6762;InbreedingCoeff=0.9999;MQ=89.13;MQ0=1;MQRankSum=-5.181;QD=32.90;ReadPosRankSum=0.735;VQSLOD=3.0130;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:21:63.18:0,63,846	1/1:2,13:15:36.11:432,36,0	0/0:24,0:24:63.16:0,63,836	0/0:21,0:21:54.10:0,54,711	1/1:1,24:25:66.20:792,66,0	1/1:1,19:20:54.16:648,54,0	1/1:1,19:20:54.17:648,54,0	1/1:1,29:30:87.24:1021,87,0	1/1:0,20:20:51.16:612,51,0	1/1:2,19:21:54.16:648,54,0	1/1:1,22:23:60.18:720,60,0	1/1:0,20:20:57.17:684,57,0	1/1:0,21:21:63.19:756,63,0	1/1:0,15:15:45.14:540,45,0	1/1:1,24:24:66.20:792,66,0	1/1:1,17:18:51.16:612,51,0	1/1:1,20:21:60.18:720,60,0	1/1:2,18:20:54.15:635,54,0	1/1:1,26:27:78.23:927,78,0	1/1:1,27:28:81.25:972,81,0	1/1:1,16:16:45.14:540,45,0	1/1:1,21:22:57.17:684,57,0	1/1:1,28:29:81.25:972,81,0	1/1:0,17:17:48.15:576,48,0	1/1:1,19:20:57.07:664,57,0	0/0:22,0:22:60.19:0,60,825	0/0:24,0:24:69.23:0,69,960	0/0:11,0:11:33.11:0,33,462
chr10	7342509	.	GT	G	4018.09	PASS	AB=1.000;AC=32;AF=0.571;AN=56;BaseQRankSum=1.489;DP=383;FS=7.960;HRun=1;HaplotypeScore=59.0172;InbreedingCoeff=0.0154;MQ=69.53;MQ0=0;MQRankSum=-1.178;QD=12.88;ReadPosRankSum=-3.259;VQSLOD=0.7285;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:90:0,90,995	0/1:2,0:2:4.58:19,0,5	0/0:14,0:15:29.11:0,29,541	0/0:11,0:9:27:0,27,351	0/1:14,0:14:36.97:49,0,37	1/1:0,22:22:39.10:475,39,0	1/1:0,16:16:39.13:506,39,0	0/1:13,0:13:17.44:116,0,17	1/1:0,14:14:24.08:305,24,0	0/1:11,0:11:10.82:142,0,11	0/1:11,0:11:27.54:28,0,49	0/0:7,0:7:6.73:0,7,82	0/1:16,0:16:38.75:39,0,61	0/1:7,0:7:12.46:12,0,20	0/0:3,0:3:7.84:0,8,32	1/1:0,10:10:21.07:265,21,0	1/1:3,27:30:51.94:658,52,0	0/1:14,0:14:9.16:9,0,94	1/1:13,0:13:35.87:352,36,0	1/1:1,17:18:32.89:325,33,0	0/1:9,0:9:5.46:5,0,45	0/1:11,0:11:17.60:107,0,18	0/1:12,0:12:15.93:16,0,89	0/1:14,0:14:7.42:7,0,106	1/1:0,20:20:30.01:331,30,0	1/1:9,0:9:3.56:134,4,0	0/1:21,0:21:64.72:65,0,81	0/1:5,0:5:6.38:51,0,6
chr10	7342511	.	AG	A	3473.69	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=3.753;DP=386;FS=17.225;HRun=1;HaplotypeScore=61.8333;InbreedingCoeff=0.9721;MQ=70.17;MQ0=0;MQRankSum=1.047;QD=24.12;ReadPosRankSum=3.941;VQSLOD=2.3284;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,102,1548	0/0:2,0:2:6.01:0,6,72	0/0:16,0:16:41.83:0,42,608	0/0:9,0:7:21.05:0,21,294	0/0:13,0:13:36.08:0,36,488	1/1:25,0:25:43.01:546,43,0	1/1:16,0:16:39.13:501,39,0	0/0:13,0:13:39.07:0,39,476	1/1:14,0:14:24.08:314,24,0	0/0:10,0:10:27.02:0,27,285	0/0:11,0:11:24.02:0,24,297	0/0:8,0:8:24.06:0,24,322	0/0:18,0:18:51.10:0,51,662	0/0:9,0:9:21.49:0,21,258	0/0:4,0:4:12.04:0,12,188	1/1:9,0:9:21.07:273,21,0	1/1:26,1:27:54.16:687,54,0	0/0:14,0:14:42.06:0,42,581	1/1:0,16:16:41.83:412,42,0	1/1:17,1:18:32.39:358,32,0	0/0:8,0:8:24.07:0,24,354	0/0:12,0:12:35.99:0,36,418	0/0:12,0:12:36.08:0,36,486	0/0:13,0:13:39.12:0,39,569	1/1:19,0:19:30.05:382,30,0	0/0:9,0:9:24.01:0,24,248	0/0:16,0:16:45.74:0,46,599	0/0:6,0:6:17.88:0,18,198
chr10	7343520	.	A	AACAC	1256.58	PASS	AB=0.996;AC=26;AF=0.591;AN=44;BaseQRankSum=-0.792;DP=578;FS=0.000;HRun=0;HaplotypeScore=134.0714;InbreedingCoeff=0.2620;MQ=62.43;MQ0=25;MQRankSum=-0.116;QD=3.94;ReadPosRankSum=-1.197;VQSLOD=2.1440;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:31,0:30:0:0,0,0	0/1:7,0:9:3.68:4,0,47	./.	./.	0/0:14,0:14:2.30:0,2,8	1/1:17,0:16:7.84:104,8,0	1/1:26,0:25:3.01:47,3,0	./.	1/1:19,0:19:18.05:244,18,0	0/0:14,0:12:2.64:0,3,27	0/0:8,0:9:6.01:0,6,55	1/1:12,0:12:6.49:79,6,0	1/1:15,0:14:6.02:76,6,0	./.	0/0:18,0:18:2.53:0,3,45	1/1:16,0:16:12.51:192,13,0	0/1:33,0:32:5.87:221,0,6	0/0:15,0:15:3.05:0,3,28	./.	1/1:21,0:21:11.91:181,12,0	0/0:20,0:18:3:0,3,45	1/1:13,3:20:2.74:12,3,0	./.	0/1:38,0:37:32:32,0,71	1/1:18,0:19:12.02:163,12,0	1/1:15,0:14:0.94:1,1,0	0/1:13,0:17:0.28:0,0,23	0/1:5,0:7:31.27:31,0,44
chr10	7343537	.	A	ACG	1220.65	PASS	AB=0.964;AC=11;AF=0.196;AN=56;BaseQRankSum=4.336;DP=618;FS=0.458;HRun=0;HaplotypeScore=108.3715;InbreedingCoeff=-0.0154;MQ=48.98;MQ0=36;MQRankSum=1.388;QD=5.81;ReadPosRankSum=2.761;VQSLOD=2.8978;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:35:74.81:0,75,602	0/0:12,0:12:7.07:0,7,162	0/0:29,0:9:26.83:0,27,219	0/0:44,0:15:3.21:0,3,237	0/0:21,0:20:41.68:0,42,340	0/1:17,0:15:19.71:150,0,20	0/1:25,0:23:24.75:236,0,25	0/0:20,0:18:53.76:0,54,432	0/1:13,3:15:13.78:165,0,14	0/0:23,0:20:53.83:0,54,470	0/0:11,0:10:20.97:0,21,191	0/1:16,0:16:2.08:2,0,145	0/0:14,0:12:5.30:0,5,195	0/0:18,0:16:23.95:0,24,194	0/0:24,0:23:47.78:0,48,412	0/1:19,2:21:90.93:181,0,91	0/1:30,1:29:99:189,0,116	0/0:27,0:24:65.52:0,66,511	0/1:17,0:16:99:112,0,121	1/1:25,1:26:13.59:195,14,0	0/0:21,0:18:47.92:0,48,411	0/1:21,0:20:1.55:2,0,105	0/0:11,0:11:14.97:0,15,122	0/0:40,0:39:42.40:0,42,674	0/1:19,1:19:51.78:133,0,52	0/0:20,0:19:53.85:0,54,454	0/0:27,0:26:53.60:0,54,401	0/0:8,0:8:16.32:0,16,98
chr10	7343573	.	A	ACACACG	2931.57	PASS	AB=1.000;AC=18;AF=0.321;AN=56;BaseQRankSum=4.939;DP=566;FS=14.758;HRun=0;HaplotypeScore=139.3474;InbreedingCoeff=0.8261;MQ=52.61;MQ0=24;MQRankSum=-0.449;QD=14.96;ReadPosRankSum=-1.399;VQSLOD=2.2080;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:37:68.86:0,69,557	0/0:11,0:11:20.48:0,20,199	0/0:26,0:11:33.03:0,33,321	0/0:24,0:13:26.92:0,27,269	0/0:31,0:29:57.15:0,57,477	1/1:13,0:12:23.77:243,24,0	1/1:19,0:18:36.39:308,36,0	0/0:18,0:17:47.61:0,48,417	1/1:12,3:14:9.04:401,9,0	0/0:26,0:22:63.04:0,63,609	0/0:13,0:12:26.99:0,27,254	0/1:17,0:17:17.16:17,0,251	0/1:12,0:10:5.84:6,0,103	0/0:12,0:10:17.98:0,18,149	0/0:14,0:13:23.70:0,24,231	1/1:17,0:20:44.42:584,44,0	1/1:31,1:31:39:417,39,0	0/0:25,0:23:54.21:0,54,455	1/1:19,0:16:24.61:283,25,0	1/1:6,21:28:14.86:328,15,0	0/0:26,0:23:41.93:0,42,387	0/0:16,0:16:11.74:0,12,80	0/0:8,0:8:11.93:0,12,98	0/0:28,0:27:55.94:0,56,469	1/1:18,0:19:40.60:548,41,0	0/0:22,0:21:62.91:0,63,544	0/0:25,0:25:65.49:0,65,518	0/0:7,0:7:14.98:0,15,171
chr10	7344015	.	GCAACCA	G	9314.11	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=14.945;DP=622;FS=4.347;HRun=0;HaplotypeScore=134.7327;InbreedingCoeff=0.9995;MQ=89.55;MQ0=0;MQRankSum=-16.544;QD=55.77;ReadPosRankSum=3.148;VQSLOD=5.2371;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,147,5158	0/0:11,0:11:33.11:0,33,1185	0/0:28,0:28:79.65:0,80,2552	0/0:31,0:31:90.28:0,90,2719	0/0:14,0:14:42.14:0,42,1530	1/1:0,27:27:66.23:1617,66,0	1/1:3,16:19:24.08:591,24,0	0/0:24,0:24:72.25:0,72,2582	1/1:0,22:22:60.21:1467,60,0	0/0:16,0:16:48.15:0,48,1555	0/0:13,0:13:36.12:0,36,1188	0/0:22,0:22:63.22:0,63,2228	0/0:22,0:22:66.20:0,66,2189	0/0:22,0:22:66.21:0,66,2271	0/0:19,0:19:57.20:0,57,2068	1/1:1,18:19:54.19:1318,54,0	1/1:1,18:19:42.14:1034,42,0	0/0:15,0:15:42.14:0,42,1421	1/1:2,11:13:33.11:812,33,0	1/1:1,22:23:45.58:1013,46,0	0/0:41,0:41:99:0,123,4461	0/0:24,0:24:72.25:0,72,2546	0/0:21,0:21:63.22:0,63,2155	0/0:19,0:19:57.18:0,57,1951	1/1:1,24:25:60.21:1463,60,0	0/0:23,0:23:69.24:0,69,2461	0/0:28,0:28:84.29:0,84,2989	0/0:13,0:13:39.08:0,39,1131
chr10	7344898	.	T	TTTCC	12032.53	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=2.026;DP=852;FS=15.371;HRun=0;HaplotypeScore=195.0727;InbreedingCoeff=0.7479;MQ=55.53;MQ0=3;MQRankSum=-0.085;QD=15.47;ReadPosRankSum=0.597;VQSLOD=3.6644;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:62.93:0,63,936	1/1:23,0:23:28.24:228,28,0	0/0:19,0:16:6.02:0,6,78	0/0:21,0:17:14.97:0,15,168	1/1:32,0:32:21.94:196,22,0	1/1:17,0:18:9.02:133,9,0	1/1:31,0:30:3.33:181,3,0	1/1:38,0:37:21.25:102,21,0	1/1:22,0:22:17.41:186,17,0	1/1:40,0:40:17.78:221,18,0	1/1:16,0:16:5.97:73,6,0	1/1:33,0:33:69.17:1359,69,0	1/1:42,0:42:36.19:1346,36,0	1/1:37,0:37:55.04:1137,55,0	1/1:50,0:50:62.95:592,63,0	1/1:27,0:28:8.81:114,9,0	1/1:20,0:20:5.85:66,6,0	1/1:20,0:20:5.93:82,6,0	1/1:27,0:28:15.44:141,15,0	1/1:36,0:36:11.65:80,12,0	1/1:43,0:42:33.36:272,33,0	1/1:28,0:28:39.74:466,40,0	1/1:35,0:35:53.57:720,54,0	1/1:30,0:30:51.13:1014,51,0	1/1:25,0:25:14.92:151,15,0	1/1:13,30:46:48.19:1735,48,0	1/1:14,19:33:26.81:647,27,0	1/1:9,15:23:33.11:793,33,0
chr10	7344912	.	T	TCCTT	11969.14	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=2.063;DP=815;FS=13.734;HRun=0;HaplotypeScore=195.6418;InbreedingCoeff=0.7394;MQ=53.22;MQ0=3;MQRankSum=-0.235;QD=16.13;ReadPosRankSum=-0.494;VQSLOD=3.6578;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:60.36:0,60,932	1/1:21,0:21:28.24:228,28,0	0/0:15,0:8:6.02:0,6,78	0/0:26,0:21:14.96:0,15,168	1/1:28,0:28:21.94:196,22,0	1/1:16,0:16:9.91:134,10,0	1/1:28,0:27:1.57:127,2,0	1/1:38,0:37:23.75:112,24,0	1/1:21,0:21:17.41:186,17,0	1/1:36,0:36:18.26:222,18,0	1/1:16,0:16:5.97:73,6,0	1/1:37,0:37:69.17:1359,69,0	1/1:36,9:46:36.19:1346,36,0	1/1:35,0:35:55.04:1137,55,0	1/1:49,0:49:62.95:592,63,0	1/1:22,0:22:9.70:116,10,0	1/1:17,0:17:5.85:66,6,0	1/1:22,0:22:5.93:82,6,0	1/1:19,0:19:12.03:110,12,0	1/1:27,0:27:12.53:82,13,0	1/1:45,0:44:33.36:272,33,0	1/1:29,0:29:40.98:469,41,0	1/1:36,0:36:53.57:720,54,0	1/1:31,0:31:51.60:1014,52,0	1/1:19,0:19:15.81:152,16,0	1/1:48,0:48:48.19:1735,48,0	1/1:31,0:31:26.81:647,27,0	1/1:24,0:23:33.11:793,33,0
chr10	7344918	.	C	CTTCC	11956.53	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=1.889;DP=789;FS=13.734;HRun=0;HaplotypeScore=191.6478;InbreedingCoeff=0.7246;MQ=55.95;MQ0=3;MQRankSum=0.817;QD=16.75;ReadPosRankSum=-1.288;VQSLOD=3.5703;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:60.36:0,60,932	1/1:18,0:18:28.24:228,28,0	0/0:22,0:15:6.02:0,6,78	0/0:21,0:17:14.96:0,15,168	1/1:29,0:29:21.94:196,22,0	1/1:16,0:16:9.02:133,9,0	1/1:26,0:24:0.32:124,0,0	1/1:37,0:36:23.75:112,24,0	1/1:18,0:18:17.41:186,17,0	1/1:31,0:31:17.78:221,18,0	1/1:15,0:15:5.97:73,6,0	1/1:37,0:37:69.17:1359,69,0	1/1:46,0:46:36.19:1346,36,0	1/1:25,6:33:55.04:1137,55,0	1/1:53,0:53:62.95:592,63,0	1/1:17,0:17:8.81:114,9,0	1/1:14,0:14:5.85:66,6,0	1/1:23,0:23:5.93:82,6,0	1/1:15,0:15:12.03:110,12,0	1/1:27,0:27:12.53:82,13,0	1/1:41,0:40:33.36:272,33,0	1/1:32,0:32:39.74:466,40,0	1/1:37,0:36:53.57:720,54,0	1/1:34,0:34:51.60:1014,52,0	1/1:18,0:18:14.92:151,15,0	1/1:47,0:47:48.19:1735,48,0	1/1:29,0:29:26.81:647,27,0	1/1:21,0:20:33.11:793,33,0
chr10	7344928	.	T	TCC	2222.07	PASS	AB=0.908;AC=13;AF=0.232;AN=56;BaseQRankSum=6.309;DP=767;FS=0.326;HRun=0;HaplotypeScore=199.3511;InbreedingCoeff=-0.2972;MQ=62.39;MQ0=3;MQRankSum=-0.559;QD=6.14;ReadPosRankSum=4.751;VQSLOD=3.1701;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:95.77:0,96,1535	0/0:17,0:17:47.98:0,48,272	0/0:25,0:19:54.11:0,54,824	0/0:27,0:22:59.41:0,59,905	0/0:24,0:24:50.26:0,50,368	0/1:15,0:15:0.52:1,0,197	0/0:30,0:28:34.69:0,35,343	0/0:27,0:26:7.98:0,8,300	0/1:15,0:15:38.03:38,0,167	0/0:29,0:29:5.88:0,6,338	0/1:10,0:10:4.29:4,0,121	0/1:27,14:41:99:429,0,281	0/1:28,16:44:99:517,0,159	0/1:24,12:36:99:433,0,131	0/0:53,0:53:10.21:0,10,608	0/1:14,0:14:14.19:14,0,188	0/0:13,0:13:8.08:0,8,162	0/0:22,0:22:32.77:0,33,313	0/0:19,0:19:18.37:0,18,257	0/0:31,0:31:75.93:0,76,507	0/0:37,0:36:64.60:0,65,465	0/1:24,3:27:90.58:91,0,271	0/1:35,5:39:99:111,0,390	0/1:24,9:33:99:381,0,152	0/0:18,0:18:15.40:0,15,241	0/1:40,0:40:99:168,0,457	0/1:27,0:27:69.97:70,0,429	0/1:20,0:19:99:112,0,150
chr10	7344929	.	T	TTC	2084.16	PASS	AB=0.900;AC=12;AF=0.214;AN=56;BaseQRankSum=4.397;DP=771;FS=6.672;HRun=0;HaplotypeScore=197.5378;InbreedingCoeff=-0.2813;MQ=62.37;MQ0=2;MQRankSum=-0.932;QD=5.84;ReadPosRankSum=-0.164;VQSLOD=2.6149;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:99:0,99,1574	0/0:17,0:17:23.06:0,23,227	0/0:25,0:19:54.03:0,54,788	0/0:27,0:22:59.25:0,59,900	0/0:24,0:24:4.18:0,4,311	0/1:15,0:15:24.23:24,0,194	0/1:30,0:28:53.69:54,0,293	0/0:29,0:28:31:0,31,337	0/0:15,0:15:8.82:0,9,213	0/1:31,0:31:12.44:12,0,310	0/1:9,0:9:10.20:10,0,127	0/1:27,14:41:99:502,0,227	0/1:29,16:45:99:555,0,139	0/1:24,12:36:99:482,0,108	0/0:53,0:53:69.88:0,70,807	0/0:14,0:14:12.83:0,13,219	0/0:13,0:13:13.05:0,13,163	0/0:21,0:21:1.49:0,1,261	0/1:19,0:19:0.17:0,0,254	0/1:31,0:31:45.83:46,0,360	0/0:39,0:38:31.22:0,31,459	0/1:24,0:27:85.17:85,0,314	0/1:36,0:40:99:114,0,406	0/1:23,9:32:99:342,0,180	0/0:19,0:19:17.33:0,17,230	0/0:39,0:39:99:0,110,1091	0/0:27,0:27:55.58:0,56,610	0/0:19,0:19:43.35:0,43,350
chr10	7346386	.	G	GCACACACACACA	3139.22	PASS	AB=1.000;AC=35;AF=0.729;AN=48;BaseQRankSum=-1.022;DP=463;FS=3.841;HRun=0;HaplotypeScore=133.2108;InbreedingCoeff=0.2499;MQ=47.30;MQ0=23;MQRankSum=-2.042;QD=8.79;ReadPosRankSum=-2.429;VQSLOD=1.9929;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:33.11:0,33,728	1/1:8,0:8:9.88:101,10,0	./.	./.	0/1:18,0:18:4.80:120,0,5	1/1:23,0:21:18.47:436,18,0	1/1:21,0:19:1.89:5,2,0	0/1:25,0:22:93.96:215,0,94	./.	0/1:19,0:18:26.75:170,0,27	1/1:17,0:16:5.69:62,6,0	./.	1/1:8,0:7:6.91:167,7,0	1/1:12,0:12:9.50:212,9,0	1/1:12,0:11:0.89:2,1,0	1/1:10,0:10:3.48:106,3,0	1/1:6,7:12:3.01:108,3,0	0/1:22,0:20:34.95:35,0,65	1/1:8,4:14:20.95:401,21,0	1/1:10,0:10:9.50:284,10,0	0/1:24,0:20:67.07:145,0,67	1/1:19,0:18:12.51:369,13,0	1/1:18,0:17:12.03:228,12,0	1/1:23,0:18:6.01:120,6,0	0/1:15,0:13:0:0,0,0	0/1:26,0:21:1.58:2,0,674	0/0:19,0:16:24.02:0,24,561	0/0:26,0:24:12.74:0,13,563
chr10	7346403	.	C	CACAC	3233.06	PASS	AB=1.000;AC=42;AF=0.875;AN=48;BaseQRankSum=-0.360;DP=420;FS=1.381;HRun=0;HaplotypeScore=77.5098;InbreedingCoeff=0.3269;MQ=40.31;MQ0=28;MQRankSum=-0.843;QD=8.44;ReadPosRankSum=-1.977;VQSLOD=2.2371;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:30:0.29:0,0,1	1/1:6,0:6:9.50:117,9,0	./.	./.	1/1:18,0:18:21.07:333,21,0	1/1:22,0:19:18:210,18,0	1/1:21,0:19:0.47:1,0,0	1/1:25,0:21:5.98:321,6,0	./.	1/1:19,0:18:30.01:403,30,0	1/1:15,0:14:6.02:96,6,0	./.	1/1:6,0:5:6.49:69,6,0	1/1:10,0:10:9.03:123,9,0	1/1:10,0:8:0.47:1,0,0	1/1:10,0:10:3.48:37,3,0	1/1:15,0:13:3.48:37,3,0	1/1:21,0:18:30.06:417,30,0	1/1:12,0:12:17.61:166,18,0	1/1:10,0:10:9.03:131,9,0	1/1:21,0:17:27.02:396,27,0	1/1:18,0:17:12.04:185,12,0	1/1:16,0:15:12.03:169,12,0	1/1:23,0:18:5.91:95,6,0	0/1:14,0:12:0:0,0,0	0/1:24,0:19:30.43:30,0,47	0/0:16,0:13:8.47:0,8,112	0/1:17,0:14:7.33:7,0,44
chr10	7348279	.	TTCTGC	T	23547.21	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=11.779;DP=617;FS=12.703;HRun=0;HaplotypeScore=129.1592;InbreedingCoeff=0.9994;MQ=84.83;MQ0=0;MQRankSum=-8.089;QD=49.99;ReadPosRankSum=4.430;VQSLOD=4.3305;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,120,3664	1/1:1,12:13:36.12:756,36,0	0/0:21,0:21:51.15:0,51,1428	0/0:25,0:25:65.89:0,66,1853	1/1:0,24:24:72.20:1467,72,0	1/1:3,15:18:36.12:755,36,0	1/1:4,21:25:57.15:1153,57,0	1/1:6,23:29:69.24:1443,69,0	1/1:1,17:18:45.15:944,45,0	1/1:2,17:19:48.16:991,48,0	1/1:1,17:18:48.12:963,48,0	1/1:0,14:14:42.14:881,42,0	1/1:2,8:11:24.08:504,24,0	1/1:1,17:18:45.15:945,45,0	1/1:1,19:20:51.18:1070,51,0	1/1:1,11:12:30.10:630,30,0	1/1:2,29:31:59.93:1259,60,0	1/1:2,23:25:57.20:1197,57,0	1/1:0,15:15:45.15:932,45,0	1/1:4,25:29:63.17:1279,63,0	1/1:0,34:34:75.21:1531,75,0	1/1:2,23:25:57.20:1196,57,0	1/1:3,13:16:36.12:756,36,0	1/1:2,35:37:81.23:1700,81,0	1/1:0,20:20:57.20:1196,57,0	0/0:14,0:14:39.13:0,39,1210	0/0:24,0:24:66.21:0,66,1971	0/0:21,0:21:63.22:0,63,1952
chr10	7348439	.	C	CGTCTCTGTCTCTGTCTCT	18695.99	PASS	AB=1.000;AC=45;AF=0.804;AN=56;BaseQRankSum=-2.603;DP=826;FS=0.453;HRun=0;HaplotypeScore=267.6348;InbreedingCoeff=0.6911;MQ=57.56;MQ0=5;MQRankSum=-7.166;QD=29.03;ReadPosRankSum=-1.828;VQSLOD=3.3832;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,108,4107	1/1:10,0:10:14.98:206,15,0	0/0:41,0:20:22.51:0,23,428	0/0:52,0:35:48.84:0,49,970	1/1:29,0:29:21.65:463,22,0	1/1:4,18:33:12.04:1017,12,0	1/1:34,0:38:51.13:1715,51,0	1/1:46,0:41:66.91:1840,67,0	1/1:5,21:32:6.02:510,6,0	1/1:32,0:30:72.20:1795,72,0	1/1:25,0:24:17.26:292,17,0	1/1:2,17:25:6.02:510,6,0	1/1:5,17:30:3.01:255,3,0	1/1:5,15:25:9.03:759,9,0	1/1:23,0:23:8.99:75,9,0	1/1:6,14:28:15.05:1272,15,0	1/1:8,13:31:15.05:1095,15,0	1/1:31,0:32:70.95:2145,71,0	1/1:10,11:26:57.08:1746,57,0	1/1:1,16:29:6.02:510,6,0	1/1:27,0:27:29.09:490,29,0	1/1:5,15:30:9.03:596,9,0	1/1:6,16:28:8.89:535,9,0	1/1:5,17:32:6.02:504,6,0	1/1:3,5:11:3.01:255,3,0	0/1:20,0:20:99:109,0,1459	0/0:24,0:24:54.08:0,54,2174	0/0:14,0:14:33.11:0,33,1228
chr10	7350001	.	TC	T	18081.86	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=11.132;DP=643;FS=0.706;HRun=1;HaplotypeScore=81.2777;InbreedingCoeff=0.9950;MQ=92.84;MQ0=0;MQRankSum=-6.426;QD=37.36;ReadPosRankSum=2.683;VQSLOD=5.3916;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,117,1806	1/1:0,6:6:15.05:210,15,0	0/0:29,0:29:87.29:0,87,1344	0/0:28,0:28:61.06:0,61,1038	1/1:0,14:14:33.11:461,33,0	1/1:0,15:15:39.13:545,39,0	1/1:0,30:30:75.25:1049,75,0	1/1:1,35:36:99:1418,105,0	1/1:0,19:19:54.18:755,54,0	1/1:0,16:16:48.11:613,48,0	1/1:1,17:18:52.99:718,53,0	1/1:0,20:20:54.18:752,54,0	1/1:0,19:19:47.96:670,48,0	1/1:0,25:25:69.23:965,69,0	1/1:0,27:27:69.23:965,69,0	1/1:0,20:20:54.18:755,54,0	1/1:0,48:48:99:1673,120,0	1/1:0,22:22:57.19:797,57,0	1/1:0,28:28:84.26:1148,84,0	1/1:0,16:16:45.12:603,45,0	1/1:0,28:28:81.27:1133,81,0	1/1:0,8:8:21.07:291,21,0	1/1:0,10:10:21.07:294,21,0	1/1:0,36:36:96.25:1343,96,0	1/1:0,23:23:66.22:923,66,0	0/0:24,1:25:33.29:0,33,1098	0/0:25,0:25:72.24:0,72,1124	0/0:12,0:12:36.12:0,36,575
chr10	7350822	.	CACTTAGAGAAA	C	10839.58	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=14.350;DP=624;FS=0.000;HRun=0;HaplotypeScore=217.4313;InbreedingCoeff=0.9943;MQ=82.66;MQ0=0;MQRankSum=-14.548;QD=71.79;ReadPosRankSum=2.130;VQSLOD=4.5518;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,108,6061	0/0:13,0:13:39.13:0,39,1874	0/0:19,0:19:54.16:0,54,2655	0/0:29,0:29:87.21:0,87,3591	0/0:22,0:22:63.22:0,63,3108	1/1:1,14:15:42.14:1445,42,0	1/1:6,18:24:51.17:1747,51,0	0/0:26,0:26:75.25:0,75,3314	1/1:4,25:29:69.24:2460,69,0	0/0:19,0:18:51.18:0,51,2371	0/0:19,0:19:51.16:0,51,2257	0/0:22,0:22:66.23:0,66,3734	0/0:23,0:23:66.23:0,66,3637	0/0:21,0:21:63.22:0,63,3634	0/0:21,0:21:63.22:0,63,3139	1/1:2,20:22:48.16:1711,48,0	1/1:5,18:23:27.09:963,27,0	0/0:15,0:15:45.12:0,45,2192	1/1:7,9:16:26.92:696,27,0	1/1:2,13:15:39.13:1391,39,0	0/0:48,0:48:99:0,141,6594	0/0:29,0:29:87.29:0,87,4640	0/0:25,0:25:72.25:0,72,4102	0/0:33,0:33:96.29:0,96,4857	1/1:2,5:7:12.04:428,12,0	0/0:21,0:21:60.20:0,60,3094	0/0:23,0:23:69.22:0,69,3791	0/0:9,0:9:27.09:0,27,1558
chr10	7351160	.	TACA	T	797.34	PASS	AC=6;AF=0.115;AN=52;BaseQRankSum=-6.747;DP=517;FS=2.916;HRun=0;HaplotypeScore=123.7596;InbreedingCoeff=0.6621;MQ=60.29;MQ0=7;MQRankSum=5.431;QD=13.07;ReadPosRankSum=1.977;VQSLOD=3.4305;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:39.02:0,39,634	0/0:6,0:6:5.93:0,6,76	./.	./.	0/0:12,0:12:3.01:0,3,37	0/0:25,0:25:35.80:0,36,345	0/0:18,0:17:13.15:0,13,117	0/0:34,0:33:29.29:0,29,182	0/0:21,0:21:32.72:0,33,262	0/0:20,0:20:30:0,30,381	0/0:13,0:13:13.20:0,13,113	0/0:12,0:12:6.02:0,6,76	0/0:10,0:9:3.01:0,3,38	0/0:14,0:14:11.97:0,12,131	0/0:24,0:24:9.03:0,9,114	0/0:21,0:21:41.79:0,42,405	0/0:20,0:20:26.44:0,26,238	0/0:12,0:13:6.49:0,6,85	0/0:20,0:19:21:0,21,225	0/0:15,0:15:23.95:0,24,298	0/0:9,0:9:8.86:0,9,81	0/0:14,0:14:3.01:0,3,38	0/0:6,0:6:6.02:0,6,75	0/0:17,0:17:8.93:0,9,84	0/0:13,0:13:23.93:0,24,270	1/1:11,6:17:17.99:175,18,0	1/1:13,17:30:42.14:558,42,0	1/1:6,8:12:14.92:199,15,0
chr10	7351212	.	ATAG	A	4987.90	PASS	AB=0.989;AC=30;AF=0.536;AN=56;BaseQRankSum=1.398;DP=503;FS=4.953;HRun=0;HaplotypeScore=131.7204;InbreedingCoeff=0.1081;MQ=58.40;MQ0=0;MQRankSum=-0.042;QD=13.20;ReadPosRankSum=-1.975;VQSLOD=4.0179;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:40.16:0,40,1200	0/1:10,0:10:25.08:25,0,45	0/0:7,0:7:18.02:0,18,336	0/0:18,0:15:37.88:0,38,481	0/1:24,0:24:43.26:43,0,49	1/1:10,1:11:12.91:285,13,0	1/1:20,0:20:38.20:658,38,0	1/1:42,0:41:27.53:166,28,0	1/1:18,0:18:53.32:612,53,0	0/1:26,0:26:85.69:86,0,184	0/1:13,1:14:38.46:38,0,50	0/0:12,0:12:3.60:0,4,57	0/1:12,0:12:4.84:5,0,22	0/1:17,0:17:35.03:35,0,89	0/1:20,0:20:75.63:105,0,76	1/1:14,1:15:27.85:492,28,0	1/1:24,0:24:45.53:664,46,0	0/1:8,0:8:26.46:26,0,29	1/1:20,1:21:53.90:625,54,0	1/1:16,0:16:2.90:356,3,0	0/1:16,0:16:18.47:87,0,18	0/1:17,0:17:31.44:63,0,31	0/1:13,0:13:38.24:38,0,94	0/1:14,0:15:17.08:17,0,39	1/1:19,0:19:30.37:560,30,0	0/0:23,0:23:65.87:0,66,966	0/0:29,0:29:65.29:0,65,652	0/0:10,0:10:16.94:0,17,159
chr10	7352033	.	C	CTCTTTCTT	9077.48	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=0.262;DP=597;FS=13.027;HRun=0;HaplotypeScore=254.1032;InbreedingCoeff=0.5756;MQ=42.26;MQ0=10;MQRankSum=1.006;QD=16.41;ReadPosRankSum=-0.612;VQSLOD=2.4142;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,19:26:21.07:772,21,0	1/1:9,0:9:8.49:127,8,0	0/0:20,0:7:3.01:0,3,63	0/0:24,0:8:3.01:0,3,50	1/1:23,0:23:29.75:456,30,0	1/1:20,0:20:21.33:215,21,0	1/1:17,0:15:12.04:159,12,0	1/1:31,0:26:33.80:275,34,0	1/1:20,0:19:23.13:661,23,0	1/1:23,0:21:14.28:188,14,0	1/1:17,0:17:16.18:206,16,0	1/1:27,0:24:14.79:219,15,0	1/1:16,0:16:10.30:163,10,0	1/1:20,0:19:4.89:118,5,0	1/1:18,0:16:12.45:183,12,0	1/1:18,0:17:34.39:406,34,0	1/1:22,0:20:24.04:401,24,0	1/1:20,0:20:20.32:254,20,0	1/1:23,0:19:33.06:450,33,0	1/1:20,0:20:26.79:352,27,0	1/1:12,0:12:2.84:14,3,0	1/1:25,0:24:36.61:366,37,0	1/1:24,0:24:51.43:548,51,0	1/1:16,0:15:13.99:217,14,0	1/1:41,0:41:41.37:942,41,0	1/1:25,0:25:35.31:511,35,0	1/1:26,0:24:39.04:532,39,0	1/1:14,0:12:21.07:340,21,0
chr10	7352061	.	T	TTC	5829.87	PASS	AB=0.814;AC=23;AF=0.411;AN=56;BaseQRankSum=10.340;DP=650;FS=63.586;HRun=0;HaplotypeScore=183.8287;InbreedingCoeff=-0.7185;MQ=41.12;MQ0=14;MQRankSum=-8.136;QD=11.21;ReadPosRankSum=-1.068;VQSLOD=1.9329;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:24:99:111,0,154	0/1:10,2:12:99:134,0,283	0/0:35,0:8:19.63:0,20,225	0/0:33,0:3:2.84:0,3,45	0/1:29,5:34:99:222,0,856	0/1:16,4:20:99:182,0,466	0/1:15,1:13:61.12:61,0,314	0/0:33,0:29:14.77:0,15,824	0/1:18,0:17:99:225,0,224	0/1:24,4:27:76.43:76,0,914	0/1:11,3:14:99:115,0,256	0/1:17,7:21:99:127,0,457	0/1:10,7:17:99:242,0,360	0/1:14,0:19:25.54:26,0,468	0/1:13,6:17:99:151,0,423	0/1:11,9:19:99:499,0,211	0/1:16,4:21:99:209,0,198	0/1:13,6:19:99:179,0,279	0/1:28,2:27:99:277,0,539	0/1:19,4:23:99:207,0,412	0/0:8,1:9:15.05:0,15,228	0/1:11,10:20:99:552,0,192	0/1:15,13:28:99:638,0,493	0/0:17,3:19:32.18:0,32,517	0/1:19,8:36:99:653,0,541	0/1:23,5:28:99:297,0,728	0/1:26,6:30:99:327,0,646	0/1:10,4:13:64.15:319,0,64
chr10	7352065	.	C	CT	2344.38	PASS	AB=0.700;AC=13;AF=0.232;AN=56;BaseQRankSum=1.662;DP=622;FS=15.331;HRun=9;HaplotypeScore=172.6826;InbreedingCoeff=0.3943;MQ=41.02;MQ0=14;MQRankSum=-7.810;QD=12.34;ReadPosRankSum=2.287;VQSLOD=1.6214;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:32.31:0,32,243	0/0:10,0:11:3.20:0,3,140	0/0:35,0:8:16.40:0,16,112	0/0:33,0:3:2.81:0,3,20	0/0:33,0:33:74.79:0,75,634	1/1:6,15:21:11.10:368,11,0	1/1:4,12:13:31.33:334,31,0	0/0:27,0:24:59.90:0,60,507	0/1:7,13:19:4.61:300,0,5	0/0:30,0:29:55.46:0,55,594	0/0:12,0:12:2.57:0,3,160	0/0:21,0:18:26.14:0,26,320	0/0:15,0:15:17.61:0,18,219	0/0:20,0:19:41.21:0,41,345	0/0:19,0:17:5.10:0,5,270	0/1:10,11:20:54.26:194,0,54	0/1:8,12:19:10.82:154,0,11	0/0:17,0:17:10.55:0,11,181	0/1:8,13:20:46.77:305,0,47	1/1:7,15:22:2.48:345,2,0	0/0:9,0:9:14.99:0,15,130	0/0:22,0:20:28.28:0,28,218	0/0:28,0:28:36.10:0,36,383	0/0:19,0:17:32.66:0,33,279	1/1:19,18:36:30.90:499,31,0	0/0:25,1:26:13.87:0,14,418	0/0:31,0:29:20.09:0,20,467	0/1:11,0:10:8.25:8,0,41
chr10	7352068	.	T	TC	964.86	PASS	AB=0.940;AC=17;AF=0.304;AN=56;BaseQRankSum=7.796;DP=605;FS=31.050;HRun=0;HaplotypeScore=169.7767;InbreedingCoeff=-0.3179;MQ=41.47;MQ0=12;MQRankSum=-6.854;QD=3.09;ReadPosRankSum=1.258;VQSLOD=1.5158;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:32.91:0,33,416	0/1:11,1:12:33.93:34,0,264	0/0:34,0:8:11.96:0,12,184	0/0:33,0:3:3.01:0,3,40	0/0:33,0:33:76.83:0,77,1047	0/1:22,0:22:50.32:121,0,50	1/1:16,0:13:1.18:70,1,0	0/0:25,0:23:64.66:0,65,837	0/1:20,0:19:34.55:86,0,35	0/0:29,2:30:22.87:0,23,943	0/1:10,1:11:21.20:21,0,264	0/0:20,1:18:3.81:0,4,529	0/1:12,1:13:15.15:15,0,335	0/0:17,0:16:37.04:0,37,538	0/1:15,3:16:57.74:58,0,451	0/1:22,0:21:52.37:91,0,52	0/1:17,1:17:32.54:92,0,33	0/1:11,3:14:13.58:14,0,281	0/1:23,0:21:68.25:68,0,91	0/1:21,0:21:72.88:79,0,73	0/0:8,0:8:18.02:0,18,228	0/0:21,0:19:5.48:0,5,300	0/0:28,0:28:40.10:0,40,616	0/0:18,0:16:35.79:0,36,472	0/1:33,0:32:3.45:204,0,3	0/1:22,2:24:25.23:25,0,705	0/1:30,3:31:73.13:73,0,723	0/1:10,2:11:65.81:69,0,66
chr10	7352268	.	TA	T	19013.31	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=12.420;DP=712;FS=1.593;HRun=3;HaplotypeScore=93.1563;InbreedingCoeff=0.9997;MQ=86.22;MQ0=0;MQRankSum=-4.307;QD=33.89;ReadPosRankSum=1.061;VQSLOD=5.1170;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:69.19:0,69,970	1/1:0,18:18:51.16:632,51,0	0/0:30,0:30:80.15:0,80,1172	0/0:21,1:22:26.95:0,27,602	1/1:0,25:25:69.22:855,69,0	1/1:3,26:29:66.20:807,66,0	1/1:1,26:27:66.21:818,66,0	1/1:2,34:36:99:1254,102,0	1/1:0,25:25:60.19:740,60,0	1/1:2,30:32:90.27:1104,90,0	1/1:0,25:25:72.23:893,72,0	1/1:0,21:21:57.18:706,57,0	1/1:0,27:27:75.24:930,75,0	1/1:0,23:23:69.22:856,69,0	1/1:0,36:36:99:1302,105,0	1/1:1,18:19:51.16:630,51,0	1/1:2,22:24:60.19:744,60,0	1/1:0,13:13:36.11:446,36,0	1/1:1,21:22:63.18:765,63,0	1/1:2,40:42:99:1410,114,0	1/1:2,25:27:75.24:930,75,0	1/1:1,22:23:66.21:818,66,0	1/1:1,20:21:60.19:744,60,0	1/1:0,28:28:81.25:1004,81,0	1/1:0,18:18:51.16:626,51,0	0/0:26,0:26:75.25:0,75,1076	0/0:33,0:32:90.30:0,90,1288	0/0:15,0:15:39.13:0,39,562
chr10	7353925	.	C	CT	2078.07	PASS	AB=0.636;AC=24;AF=0.429;AN=56;BaseQRankSum=5.681;DP=349;FS=13.276;HRun=9;HaplotypeScore=43.9182;InbreedingCoeff=0.7176;MQ=68.25;MQ0=2;MQRankSum=-7.247;QD=14.95;ReadPosRankSum=0.875;VQSLOD=2.0016;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:24:59.96:0,60,516	0/0:6,0:7:15.85:0,16,115	0/0:16,0:14:14.07:0,14,169	0/0:11,0:8:14.70:0,15,116	0/0:24,0:24:59.99:0,60,521	1/1:3,5:9:17.88:180,18,0	0/1:4,4:8:0.37:118,0,0	0/0:33,0:33:86.92:0,87,742	1/1:0,5:5:15.04:166,15,0	0/0:9,0:9:17.98:0,18,154	0/0:7,0:7:18.47:0,18,158	1/1:1,1:8:17.04:85,17,0	0/1:2,0:7:0.06:54,0,0	1/1:3,0:8:17.16:90,17,0	0/0:8,0:8:17.99:0,18,156	1/1:1,4:5:15.04:166,15,0	0/1:10,10:18:14.43:264,0,14	0/0:18,0:18:41.99:0,42,365	0/1:8,13:20:7.03:373,0,7	1/1:5,13:18:39.06:417,39,0	0/0:9,0:9:20.98:0,21,178	1/1:3,0:5:2.84:14,3,0	1/1:0,0:7:8.52:43,9,0	1/1:2,0:3:2.84:14,3,0	1/1:1,11:11:27.07:298,27,0	0/0:14,0:14:35.97:0,36,309	0/0:13,0:13:23.99:0,24,208	0/0:16,0:16:47.99:0,48,416
chr10	7353950	.	A	AT	1463.68	PASS	AB=0.654;AC=24;AF=0.462;AN=52;BaseQRankSum=8.742;DP=295;FS=3.650;HRun=7;HaplotypeScore=33.2960;InbreedingCoeff=0.7298;MQ=45.24;MQ0=19;MQRankSum=-9.108;QD=14.07;ReadPosRankSum=0.630;VQSLOD=2.2801;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:22:42.05:0,42,399	0/0:6,0:5:12.02:0,12,116	1/1:3,0:1:2.74:12,3,0	0/0:5,0:3:2.87:0,3,15	0/0:22,0:22:53.87:0,54,516	1/1:2,0:10:17.37:98,17,0	1/1:1,0:4:11.59:64,12,0	0/0:31,0:30:57.02:0,57,536	1/1:3,5:7:12.04:145,12,0	0/0:13,0:10:27.04:0,27,260	0/0:10,0:9:21.03:0,21,201	1/1:1,6:6:12.04:144,12,0	0/1:2,4:6:10.94:147,0,11	1/1:1,3:4:9.03:109,9,0	0/0:6,0:5:12.02:0,12,116	1/1:0,4:4:12.04:145,12,0	0/1:10,0:13:46.56:47,0,89	0/0:14,0:12:28.29:0,28,263	1/1:6,9:11:27.08:326,27,0	1/1:3,10:10:24.07:289,24,0	0/0:9,0:7:15.02:0,15,144	./.	1/1:2,0:2:3.01:36,3,0	./.	1/1:2,0:10:20.13:102,20,0	0/0:14,0:12:33.05:0,33,318	0/0:8,0:8:21.03:0,21,203	0/0:20,0:18:36.05:0,36,348
chr10	7355417	.	T	TG	14988.45	PASS	AB=0.941;AC=29;AF=0.518;AN=56;BaseQRankSum=-11.423;DP=704;FS=0.881;HRun=0;HaplotypeScore=68.9948;InbreedingCoeff=0.9538;MQ=86.10;MQ0=0;MQRankSum=-2.854;QD=42.46;ReadPosRankSum=2.990;VQSLOD=5.5779;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,159,2171	0/0:11,0:11:33.11:0,33,460	0/1:15,1:16:2.60:3,0,524	0/0:34,0:34:74.32:0,74,1208	0/0:25,0:25:75.21:0,75,1011	1/1:0,32:32:96.33:1532,96,0	1/1:0,26:26:78.27:1247,78,0	0/0:34,0:34:99:0,99,1338	1/1:0,22:22:60.20:959,60,0	0/0:21,0:21:63.19:0,63,861	0/0:33,0:33:96.32:0,96,1340	1/1:0,26:26:69.24:1103,69,0	1/1:3,24:27:63.21:1006,63,0	1/1:0,27:27:72.25:1150,72,0	0/0:26,0:26:75.25:0,75,1048	1/1:0,17:17:51.17:815,51,0	1/1:0,15:16:42.14:657,42,0	0/0:14,0:14:42.14:0,42,587	1/1:2,22:24:72.25:1147,72,0	1/1:0,23:23:66.23:1055,66,0	0/0:37,0:37:99:0,108,1495	1/1:0,15:15:45.15:719,45,0	1/1:0,21:21:57.02:911,57,0	1/1:0,35:35:93.32:1486,93,0	1/1:0,26:26:75.26:1198,75,0	0/0:18,0:18:51.15:0,51,681	0/0:27,0:27:81.23:0,81,1081	0/0:18,0:18:54.18:0,54,753
chr10	7355573	.	G	GC	15297.02	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=19.080;DP=713;FS=0.878;HRun=0;HaplotypeScore=96.2135;InbreedingCoeff=0.9999;MQ=88.96;MQ0=0;MQRankSum=-4.084;QD=44.21;ReadPosRankSum=4.138;VQSLOD=4.7988;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:61,0:61:99:0,175,2433	0/0:15,0:15:45.15:0,45,629	0/0:28,0:27:72.23:0,72,988	0/0:26,0:27:67.69:0,68,887	0/0:33,0:33:90.30:0,90,1257	1/1:0,28:28:75.26:1199,75,0	1/1:1,25:26:72.25:1151,72,0	0/0:35,0:35:99:0,105,1435	1/1:1,26:27:78.27:1247,78,0	0/0:22,0:22:66.22:0,66,923	0/0:13,0:13:39.13:0,39,542	1/1:1,25:26:63.21:1007,63,0	1/1:1,22:23:66.22:1049,66,0	1/1:0,23:23:66.23:1055,66,0	0/0:20,0:19:60.20:0,60,839	1/1:0,20:20:57.19:911,57,0	1/1:0,23:23:60.20:959,60,0	0/0:15,0:15:45.13:0,45,610	1/1:3,29:32:93.30:1458,93,0	1/1:3,24:27:72.25:1147,72,0	0/0:38,0:38:99:0,114,1594	1/1:0,31:31:87.77:1383,88,0	1/1:0,12:12:33.11:527,33,0	1/1:0,32:32:93.32:1487,93,0	1/1:0,16:16:45.15:716,45,0	0/0:23,0:23:69.21:0,69,933	0/0:21,0:21:60.20:0,60,839	0/0:16,0:16:45.15:0,45,628
chr10	7355999	.	TTGTGTGTGTGTGTGTGTGTG	T	15407.16	PASS	AB=0.954;AC=30;AF=0.536;AN=56;BaseQRankSum=11.695;DP=605;FS=15.510;HRun=0;HaplotypeScore=313.5475;InbreedingCoeff=0.7819;MQ=58.04;MQ0=1;MQRankSum=-10.294;QD=50.19;ReadPosRankSum=5.404;VQSLOD=2.3835;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:37:48.14:0,48,3556	0/0:7,0:8:8.98:0,9,411	0/0:26,0:16:2.55:0,3,1335	0/0:24,0:14:27.09:0,27,1070	0/0:11,0:21:16.10:0,16,588	1/1:7,10:17:27.09:1062,27,0	1/1:6,13:19:21.07:846,21,0	0/0:38,0:38:75.25:0,75,4050	1/1:6,6:12:18.06:648,18,0	0/0:26,0:33:94.57:0,95,6036	0/0:24,0:24:8.84:0,9,593	1/1:9,9:18:18.06:787,18,0	1/1:7,10:17:24.08:1165,24,0	1/1:10,8:18:12.04:578,12,0	0/1:13,1:25:99:121,0,1737	1/1:4,14:18:33.11:1560,33,0	1/1:8,10:18:6.02:327,6,0	0/1:17,1:18:99:124,0,1534	1/1:12,8:20:24.06:840,24,0	1/1:6,23:29:63.17:2440,63,0	0/0:19,0:23:21.93:0,22,683	1/1:3,15:18:36.12:1542,36,0	1/1:6,16:22:35.98:1224,36,0	1/1:5,7:11:9.50:230,10,0	1/1:8,18:26:42.14:1913,42,0	0/0:10,0:30:84.29:0,84,6763	0/0:9,0:23:54.15:0,54,3304	0/0:4,0:10:21.07:0,21,1818
chr10	7357168	.	CTA	C	10023.41	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=18.067;DP=533;FS=3.434;HRun=0;HaplotypeScore=98.1316;InbreedingCoeff=0.9993;MQ=75.95;MQ0=0;MQRankSum=-1.869;QD=36.45;ReadPosRankSum=3.448;VQSLOD=7.3148;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:51.17:0,51,905	0/0:10,0:10:30.10:0,30,540	0/0:11,0:10:27.09:0,27,486	0/0:16,0:16:38.57:0,39,731	0/0:27,0:27:81.28:0,81,1443	1/1:2,30:32:84.28:1176,84,0	1/1:1,8:9:24.08:336,24,0	0/0:27,0:27:75.24:0,75,1297	1/1:0,14:14:39.13:546,39,0	0/0:21,0:21:60.21:0,60,1074	0/0:18,0:18:54.17:0,54,943	1/1:1,18:19:48.16:672,48,0	1/1:6,18:24:54.18:756,54,0	1/1:1,18:19:54.18:756,54,0	0/0:14,0:14:42.14:0,42,756	1/1:1,13:14:36.12:501,36,0	1/1:1,23:24:65.96:924,66,0	0/0:33,0:33:96.33:0,96,1729	1/1:1,21:22:63.21:881,63,0	1/1:3,23:26:69.02:937,69,0	0/0:12,0:12:30.10:0,30,540	1/1:0,16:16:44.91:608,45,0	1/1:3,18:21:48.16:672,48,0	1/1:3,15:18:42.14:586,42,0	1/1:0,17:17:48.16:672,48,0	0/0:19,0:19:54.13:0,54,912	0/0:20,0:20:57.19:0,57,1002	0/0:10,0:10:30.10:0,30,539
chr10	7357254	.	A	AT	3787.33	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=9.043;DP=483;FS=7.200;HRun=4;HaplotypeScore=90.1709;InbreedingCoeff=0.8542;MQ=72.31;MQ0=0;MQRankSum=-0.537;QD=22.41;ReadPosRankSum=-1.402;VQSLOD=2.1129;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:72.22:0,72,862	0/0:5,0:5:15.05:0,15,180	0/0:10,0:10:24.05:0,24,268	0/0:12,0:11:25.60:0,26,266	0/0:25,0:25:72.22:0,72,863	1/1:2,16:18:51.15:595,51,0	1/1:4,11:15:36.54:405,37,0	0/0:24,0:24:60.17:0,60,707	1/1:4,9:13:27.08:317,27,0	0/0:33,0:33:93.28:0,93,1107	0/0:14,0:14:42.12:0,42,492	0/1:17,0:17:24.18:24,0,25	0/0:20,0:20:5.12:0,5,46	0/0:12,0:12:15.95:0,16,42	0/0:12,0:12:30.09:0,30,360	1/1:7,6:13:16.50:292,17,0	1/1:5,16:21:53.92:616,54,0	0/0:27,0:27:75.70:0,76,896	1/1:9,13:22:42.95:457,43,0	1/1:16,12:29:54.54:622,55,0	0/0:1,0:1:3.01:0,3,36	0/0:9,0:9:10.56:0,11,27	0/0:12,0:12:15.28:0,15,46	0/0:17,0:17:20.79:0,21,55	1/1:8,13:21:41.66:458,42,0	0/0:15,0:15:45.13:0,45,530	0/0:26,0:26:78.24:0,78,931	0/0:16,0:16:45.09:0,45,536
chr10	7357257	.	TA	T	5702.57	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=15.460;DP=488;FS=0.000;HRun=1;HaplotypeScore=82.1051;InbreedingCoeff=0.9724;MQ=72.39;MQ0=0;MQRankSum=0.157;QD=23.86;ReadPosRankSum=-0.413;VQSLOD=4.5627;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:75.21:0,75,1007	0/0:5,0:5:15.05:0,15,209	0/0:11,0:11:29.71:0,30,302	0/0:12,0:11:19.04:0,19,309	0/0:25,0:25:75.23:0,75,1021	1/1:19,0:19:52.67:321,53,0	1/1:15,0:15:37.02:246,37,0	0/0:24,0:24:72.22:0,72,953	1/1:11,0:11:30.32:180,30,0	0/0:31,0:31:93.28:0,93,1266	0/0:15,0:15:45.09:0,45,558	1/1:7,12:19:54.13:675,54,0	1/1:1,18:19:57.18:766,57,0	1/1:2,10:12:36.06:451,36,0	0/0:12,0:12:36.09:0,36,462	1/1:13,0:13:33.11:250,33,0	1/1:22,0:22:58.03:349,58,0	0/0:30,0:30:90.09:0,90,1091	1/1:21,0:21:56.07:401,56,0	1/1:27,2:29:71.36:474,71,0	0/0:1,0:1:3.01:0,3,42	1/1:0,10:10:24.04:313,24,0	1/1:1,12:13:24.60:350,25,0	1/1:4,12:16:45.14:608,45,0	1/1:20,0:20:47.81:318,48,0	0/0:16,0:16:48.12:0,48,609	0/0:26,0:26:78.25:0,78,1066	0/0:16,0:16:45.15:0,45,627
chr10	7361301	.	TC	T	5075.35	PASS	AB=0.909;AC=17;AF=0.304;AN=56;BaseQRankSum=11.511;DP=520;FS=1.628;HRun=4;HaplotypeScore=50.9299;InbreedingCoeff=0.9206;MQ=80.98;MQ0=0;MQRankSum=-3.063;QD=30.03;ReadPosRankSum=-1.507;VQSLOD=4.2468;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:84.28:0,84,1176	1/1:0,12:12:36.11:432,36,0	0/0:16,0:16:42.11:0,42,588	0/0:14,0:14:32.74:0,33,445	1/1:0,30:30:87.27:1044,87,0	0/0:31,0:31:93.30:0,93,1286	0/0:19,0:18:51.17:0,51,713	1/1:0,20:20:60.17:709,60,0	0/0:17,0:17:51.17:0,51,712	1/1:1,20:21:60.18:720,60,0	1/1:0,17:17:45.14:540,45,0	0/0:15,0:15:45.15:0,45,630	0/0:19,0:19:57.19:0,57,795	0/0:8,0:8:24.07:0,24,317	1/1:0,21:21:60.18:719,60,0	0/0:17,0:17:48.16:0,48,672	0/0:23,0:23:69.23:0,69,965	1/1:0,10:10:30.09:360,30,0	0/0:17,0:17:48.16:0,48,668	0/0:21,0:21:57.19:0,57,793	1/1:2,16:18:45.14:540,45,0	0/0:14,0:14:42.14:0,42,586	0/0:24,0:24:72.24:0,72,1008	0/0:13,0:13:36.12:0,36,503	0/0:11,0:11:33.11:0,33,460	0/1:18,2:20:11.31:11,0,696	0/0:29,0:29:87.29:0,87,1212	0/0:14,0:14:42.14:0,42,588
chr10	7362961	.	CACAGTA	C	3627.72	PASS	AB=0.940;AC=26;AF=0.464;AN=56;BaseQRankSum=7.094;DP=905;FS=19.825;HRun=0;HaplotypeScore=244.3311;InbreedingCoeff=0.0907;MQ=53.01;MQ0=48;MQRankSum=-0.603;QD=6.34;ReadPosRankSum=-3.508;VQSLOD=0.5466;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:54:61.09:0,61,2007	0/1:12,0:11:5.95:6,0,183	0/0:69,0:19:53.40:0,53,771	0/0:76,0:29:40.42:0,40,539	0/1:18,0:13:24.91:25,0,174	1/1:27,1:22:30.51:338,31,0	1/1:36,0:31:11.28:138,11,0	0/0:36,0:23:66.02:0,66,965	1/1:33,0:32:40.79:332,41,0	0/1:36,0:29:73.97:74,0,429	0/0:18,0:15:14.52:0,15,180	0/1:25,0:23:10.57:11,0,563	0/1:34,0:34:99:179,0,726	0/1:43,0:41:18.46:18,0,704	0/1:40,0:37:68.54:69,0,488	1/1:30,0:23:46.42:613,46,0	1/1:36,0:34:51.16:802,51,0	0/1:15,0:14:45.68:46,0,192	0/1:6,15:17:24.38:581,0,24	0/1:6,15:20:0:0,0,1	0/1:71,0:62:6.70:7,0,562	0/0:24,0:23:44.80:0,45,941	0/0:14,0:13:21.06:0,21,323	0/0:38,0:36:6.37:0,6,1147	1/1:25,0:20:13.66:209,14,0	0/1:22,0:21:11.66:12,0,727	0/1:15,0:15:9.03:9,0,415	0/1:11,0:10:2.11:161,0,2
chr10	7362963	.	CAGTA	C	893.59	PASS	AB=0.939;AC=11;AF=0.196;AN=56;BaseQRankSum=7.633;DP=880;FS=27.358;HRun=0;HaplotypeScore=236.3962;InbreedingCoeff=-0.0129;MQ=53.49;MQ0=34;MQRankSum=-0.023;QD=3.75;ReadPosRankSum=-3.802;VQSLOD=0.9658;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:54:99:0,129,3349	0/0:11,0:10:18.05:0,18,382	0/0:70,0:20:57.05:0,57,1060	0/0:78,0:30:53.76:0,54,804	0/0:16,0:13:14.31:0,14,398	0/1:28,0:22:6.89:7,0,96	1/1:34,1:30:2.82:15,3,0	0/0:34,0:24:67.59:0,68,1344	0/0:29,1:29:3.44:0,3,234	0/0:34,0:29:50.41:0,50,956	0/0:17,1:15:15.03:0,15,293	0/0:24,0:22:39.15:0,39,1031	0/0:34,0:34:49.69:0,50,1419	0/0:42,0:40:66.99:0,67,1452	0/0:39,0:37:23.31:0,23,701	0/1:31,0:24:69.73:72,0,70	0/1:36,0:34:55.41:55,0,76	0/0:15,0:14:30.31:0,30,479	0/1:19,0:17:82.18:439,0,82	0/1:17,0:17:0:0,0,0	0/0:65,0:57:50.36:0,50,1166	0/0:23,0:23:59.87:0,60,1543	0/0:14,0:13:21.07:0,21,523	0/0:39,0:37:73.29:0,73,1948	0/1:24,1:20:14.28:45,0,14	0/1:19,2:21:66.42:66,0,912	0/1:11,4:15:99:149,0,177	0/1:8,3:10:34.89:183,0,35
chr10	7362967	.	AACAGACAC	A	2794.97	PASS	AB=1.000;AC=16;AF=0.286;AN=56;BaseQRankSum=-0.535;DP=835;FS=9.682;HRun=0;HaplotypeScore=268.6164;InbreedingCoeff=0.7915;MQ=54.46;MQ0=20;MQRankSum=-4.045;QD=12.10;ReadPosRankSum=0.189;VQSLOD=0.4780;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:87.34:0,87,2221	1/1:9,1:9:14.84:175,15,0	0/0:67,0:20:5.38:0,5,52	0/0:75,0:29:5.15:0,5,143	1/1:12,0:12:11.83:237,12,0	0/0:25,0:20:20.78:0,21,194	0/0:29,0:24:14.35:0,14,148	1/1:27,0:22:24.01:352,24,0	0/1:29,0:28:1.60:2,0,55	1/1:25,3:26:45.15:953,45,0	0/1:15,0:14:0:0,0,0	0/0:26,0:24:39.12:0,39,1064	0/0:37,0:37:53.21:0,53,1382	0/0:41,0:40:47.83:0,48,1305	1/1:36,2:36:26.24:347,26,0	0/0:29,0:22:40.96:0,41,298	0/0:32,0:30:47.40:0,47,350	1/1:15,0:14:1.15:437,1,0	0/0:20,0:19:27.84:0,28,195	0/0:16,0:16:0:0,0,1	1/1:57,0:51:21.72:472,22,0	0/0:27,0:27:39.12:0,39,965	0/0:14,0:13:12.04:0,12,285	0/0:38,0:36:53.34:0,53,1362	0/0:24,0:19:14.49:0,14,80	0/0:22,0:22:29.98:0,30,345	0/0:17,0:17:41.99:0,42,545	0/0:11,0:10:21.43:0,21,252
chr10	7362995	.	GAC	G	1319.21	PASS	AB=0.846;AC=7;AF=0.125;AN=56;BaseQRankSum=-0.279;DP=781;FS=31.399;HRun=0;HaplotypeScore=216.5871;InbreedingCoeff=-0.1491;MQ=46.26;MQ0=26;MQRankSum=-1.987;QD=7.05;ReadPosRankSum=2.458;VQSLOD=1.7921;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:42:99:0,108,1794	0/1:9,3:12:92.95:120,0,93	0/0:25,0:5:6.01:0,6,70	0/0:45,1:10:14.91:0,15,196	0/1:13,2:15:99:125,0,136	0/0:27,0:21:38.60:0,39,592	0/0:34,0:29:56.25:0,56,770	0/1:33,1:25:99:196,0,317	0/0:32,0:31:59.85:0,60,870	0/1:20,8:27:99:441,0,234	0/0:8,5:14:17.60:0,18,210	0/0:26,0:25:63.15:0,63,900	0/0:30,0:30:78.19:0,78,1127	0/0:37,0:36:72.19:0,72,1091	0/1:17,12:28:74.40:74,0,451	0/0:35,0:29:75.23:0,75,1232	0/0:34,0:32:89.68:0,90,1300	0/1:9,3:12:99:240,0,121	0/0:30,0:28:64:0,64,794	0/0:20,0:20:18.06:0,18,297	0/1:56,1:53:99:253,0,245	0/0:28,0:28:63.14:0,63,900	0/0:17,0:17:28.68:0,29,399	0/0:32,0:32:78.70:0,79,1232	0/0:27,1:23:36.10:0,36,593	0/0:18,0:18:50.95:0,51,704	0/0:21,0:21:57.16:0,57,750	0/0:14,0:12:27.98:0,28,430
chr10	7363003	.	GACACAGACAC	G	1972.85	PASS	AB=1.000;AC=18;AF=0.321;AN=56;BaseQRankSum=0.548;DP=792;FS=15.844;HRun=0;HaplotypeScore=298.6737;InbreedingCoeff=0.6523;MQ=45.85;MQ0=31;MQRankSum=-3.415;QD=7.07;ReadPosRankSum=-2.383;VQSLOD=0.8354;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:38:87.08:0,87,2418	1/1:10,1:11:11.03:84,11,0	0/1:30,0:3:0.82:1,0,29	0/0:47,0:8:5.99:0,6,129	1/1:16,1:17:18.15:163,18,0	0/0:30,0:25:57.17:0,57,695	0/0:33,0:31:57.11:0,57,733	0/1:31,0:22:79.20:98,0,79	0/0:34,0:34:54.02:0,54,999	1/1:26,2:28:57.72:801,58,0	1/1:8,4:13:14.41:51,14,0	0/0:29,0:27:60.18:0,60,1760	0/0:32,0:32:66.01:0,66,1967	0/0:36,0:35:72.08:0,72,1813	1/1:22,7:31:45.91:370,46,0	0/0:34,0:32:75.55:0,76,1249	0/0:34,0:32:92.50:0,92,1401	1/1:14,1:15:9.20:264,9,0	0/0:32,0:30:54.01:0,54,701	0/0:22,0:22:29.55:0,30,485	1/1:63,0:60:6.57:254,7,0	0/0:27,0:27:60.12:0,60,1292	0/0:16,0:16:30.54:0,31,634	0/0:30,0:30:62.63:0,63,1750	0/0:24,0:21:44.78:0,45,706	0/1:17,0:17:51.57:52,0,253	0/1:21,0:21:27.98:28,0,329	0/0:12,0:10:25.33:0,25,218
chr10	7363009	.	GACAC	G	3600.01	PASS	AB=0.745;AC=19;AF=0.339;AN=56;BaseQRankSum=-3.724;DP=794;FS=7.016;HRun=0;HaplotypeScore=235.3766;InbreedingCoeff=0.7166;MQ=48.66;MQ0=29;MQRankSum=-3.021;QD=13.24;ReadPosRankSum=-2.225;VQSLOD=2.1328;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:37:59.59:0,60,1145	1/1:6,3:9:13.26:174,13,0	0/0:34,0:5:2.88:0,3,97	0/0:53,0:12:17.79:0,18,271	1/1:7,9:16:9.18:183,9,0	0/0:26,0:25:43.91:0,44,382	0/0:31,0:29:47.51:0,48,553	1/1:15,15:23:38.61:474,39,0	0/0:33,0:34:49.47:0,49,770	1/1:18,13:31:59.91:845,60,0	1/1:6,10:16:17.96:298,18,0	0/0:11,0:29:57.06:0,57,811	0/0:8,0:29:56.13:0,56,763	0/0:14,0:37:54.95:0,55,741	1/1:18,15:32:56.83:843,57,0	0/0:33,0:34:38.99:0,39,723	0/0:34,0:34:54:0,54,847	1/1:8,6:14:13.60:192,14,0	0/0:23,0:21:37.12:0,37,399	0/0:17,0:18:29.54:0,30,313	1/1:25,39:61:32.76:405,33,0	0/0:9,0:25:37.56:0,38,458	0/0:6,0:17:20.99:0,21,227	0/0:16,0:28:45.93:0,46,754	0/0:24,0:23:50.18:0,50,512	0/1:12,2:20:99:106,0,132	0/1:15,1:23:58.73:59,0,166	0/1:10,0:12:22.41:22,0,64
chr10	7363010	.	ACAC	A	210.24	PASS	AB=0.994;AC=11;AF=0.196;AN=56;BaseQRankSum=3.575;DP=796;FS=2.009;HRun=0;HaplotypeScore=235.1330;InbreedingCoeff=0.0043;MQ=48.77;MQ0=29;MQRankSum=-2.928;QD=0.76;ReadPosRankSum=-0.556;VQSLOD=2.5763;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:39:83.53:0,84,1662	0/1:9,0:9:18.34:18,0,40	0/0:36,0:5:13.29:0,13,181	0/0:55,0:13:28.25:0,28,474	0/1:16,0:16:12.64:13,0,69	0/1:25,0:24:1.52:2,0,426	0/0:31,0:29:4.33:0,4,508	0/1:31,0:23:15.02:15,0,236	0/0:33,1:35:41.79:0,42,765	0/1:32,0:31:66.54:67,0,172	1/1:16,0:16:15.93:65,16,0	0/0:31,0:29:63.69:0,64,1160	0/0:29,0:29:68.89:0,69,1164	0/0:37,0:37:72.22:0,72,1154	0/1:33,0:32:22.61:131,0,23	0/1:34,2:35:1.05:1,0,674	0/0:34,1:34:33.14:0,33,780	0/1:14,0:14:10.38:10,0,145	0/0:22,0:20:9.08:0,9,373	0/0:16,1:17:30.06:0,30,325	0/1:64,0:60:30.94:31,0,144	0/0:24,0:24:57.19:0,57,928	0/0:17,0:17:23.98:0,24,440	0/0:28,0:28:61.45:0,61,1091	0/0:24,0:23:33.86:0,34,506	0/0:21,0:21:25.84:0,26,314	0/0:23,0:23:39.77:0,40,441	0/0:14,0:12:26.70:0,27,247
chr10	7363942	.	T	TGA	4228.75	PASS	AB=0.996;AC=25;AF=0.446;AN=56;BaseQRankSum=6.869;DP=600;FS=9.666;HRun=0;HaplotypeScore=115.1354;InbreedingCoeff=0.3614;MQ=53.94;MQ0=15;MQRankSum=2.580;QD=11.28;ReadPosRankSum=8.629;VQSLOD=2.8066;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:41,0:38:99:117,0,165	1/1:4,3:7:10.69:230,11,0	0/0:26,0:13:28.84:0,29,264	0/0:34,0:18:38.19:0,38,382	1/1:2,13:15:12:169,12,0	0/0:25,0:23:36.16:0,36,264	0/0:29,0:29:35.97:0,36,394	1/1:4,18:21:23.35:494,23,0	0/1:22,0:22:28.91:29,0,53	1/1:4,13:15:36.17:505,36,0	1/1:2,15:17:9.33:174,9,0	0/1:23,0:23:3:3,0,96	0/1:9,0:9:8.31:8,0,56	0/0:13,0:13:9.75:0,10,107	1/1:2,27:29:40.76:908,41,0	0/0:18,0:18:14.51:0,15,158	0/0:28,0:28:16.14:0,16,204	1/1:2,24:26:8.82:677,9,0	0/0:10,0:10:27.78:0,28,223	0/0:23,0:22:19.73:0,20,206	1/1:7,32:39:2.30:706,2,0	0/0:8,0:8:3:0,3,25	0/0:11,0:11:20.78:0,21,152	0/1:18,0:18:5.24:5,0,49	0/1:25,0:25:0.13:0,0,105	0/1:28,1:27:99:188,0,290	0/1:15,0:15:10.81:11,0,170	0/1:20,0:20:3.68:4,0,184
chr10	7364149	.	GTCTCTCTCTCTCTC	G	692.64	PASS	AB=1.000;AC=7;AF=0.140;AN=50;BaseQRankSum=4.170;DP=424;FS=2.187;HRun=0;HaplotypeScore=146.0409;InbreedingCoeff=0.4170;MQ=68.32;MQ0=10;MQRankSum=-1.930;QD=12.37;ReadPosRankSum=0.196;VQSLOD=2.4556;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:24:30.01:0,30,440	0/0:7,0:7:3.41:0,3,19	0/0:21,0:14:6.02:0,6,110	0/0:27,0:12:5.75:0,6,56	0/0:19,0:19:8.97:0,9,70	0/0:16,0:16:12.01:0,12,138	0/0:17,0:17:17.43:0,17,220	0/0:26,0:26:25.44:0,25,249	0/0:12,0:11:2.85:0,3,52	0/1:10,0:10:71.74:72,0,118	0/0:14,0:14:6.01:0,6,75	0/0:18,0:18:3.48:0,3,52	./.	./.	0/0:14,0:14:6:0,6,52	0/0:10,0:9:3.14:0,3,40	0/0:18,0:18:21.43:0,21,332	0/0:9,0:9:9.03:0,9,149	0/0:18,0:14:30.08:0,30,505	0/0:22,0:22:21.03:0,21,296	0/0:9,0:9:3.01:0,3,35	0/0:13,0:13:6.02:0,6,101	0/0:14,0:14:3.01:0,3,48	./.	0/0:18,0:17:14.66:0,15,152	1/1:6,8:13:23.90:331,24,0	1/1:5,11:16:3.01:119,3,0	1/1:16,0:16:23.71:301,24,0
chr10	7364185	.	CTCCCTCTT	C	1383.81	PASS	AB=0.933;AC=26;AF=0.684;AN=38;BaseQRankSum=-3.154;DP=280;FS=2.247;HRun=0;HaplotypeScore=70.7899;InbreedingCoeff=-0.0001;MQ=37.54;MQ0=25;MQRankSum=1.132;QD=7.56;ReadPosRankSum=3.131;VQSLOD=1.3856;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:19,0:16:78.03:110,0,78	1/1:3,0:3:5.95:66,6,0	./.	./.	1/1:7,0:7:3.01:50,3,0	1/1:13,0:11:2.94:48,3,0	1/1:18,0:14:4.14:79,4,0	1/1:5,0:4:6.90:71,7,0	0/0:6,0:5:3.58:0,4,9	1/1:8,0:7:12.02:169,12,0	./.	1/1:13,0:13:6.02:72,6,0	1/1:9,0:7:3.01:36,3,0	./.	./.	0/1:14,0:14:0.28:171,0,0	1/1:18,0:18:1.32:242,1,0	1/1:2,0:2:3.01:43,3,0	0/1:11,0:8:7.58:23,0,8	./.	./.	./.	./.	0/0:10,0:7:3.01:0,3,39	0/0:11,0:11:1.81:0,2,5	0/1:14,0:12:6.24:99,0,6	0/1:17,0:17:0.94:126,0,1	0/1:4,8:12:5.44:89,0,5
chr10	7365098	.	C	CCT	22353.16	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-5.588;DP=565;FS=2.851;HRun=0;HaplotypeScore=69.9407;InbreedingCoeff=0.9928;MQ=84.80;MQ0=0;MQRankSum=-5.391;QD=49.67;ReadPosRankSum=1.940;VQSLOD=6.0953;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,108,1550	1/1:1,8:9:24.08:450,24,0	0/0:27,0:27:72.21:0,72,1023	0/0:9,0:9:24.04:0,24,322	1/1:2,18:20:51.17:955,51,0	1/1:3,17:20:48.16:899,48,0	1/1:3,30:33:84.24:1536,84,0	1/1:4,23:28:75.18:1260,75,0	1/1:1,19:20:57.19:1048,57,0	1/1:0,12:12:36.12:674,36,0	1/1:0,13:14:39.13:724,39,0	1/1:0,21:21:63.22:1180,63,0	1/1:1,11:12:33.11:618,33,0	1/1:1,18:19:54.18:994,54,0	1/1:0,23:23:69.24:1293,69,0	1/1:1,26:27:75.26:1387,75,0	1/1:2,20:23:60.21:1124,60,0	1/1:2,19:21:50.63:940,51,0	1/1:3,17:20:57.19:1037,57,0	1/1:2,14:15:42.14:786,42,0	1/1:1,29:32:75.26:1405,75,0	1/1:1,18:19:51.17:955,51,0	1/1:1,19:20:54.19:1011,54,0	1/1:1,21:22:60.21:1124,60,0	1/1:1,18:19:51.17:953,51,0	0/0:12,0:12:36.11:0,36,512	0/0:26,0:26:78.25:0,78,1127	0/0:4,0:4:12.04:0,12,177
chr10	7367362	.	GT	G	8957.78	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=12.462;DP=676;FS=1.353;HRun=9;HaplotypeScore=70.8323;InbreedingCoeff=0.9979;MQ=73.25;MQ0=0;MQRankSum=-3.480;QD=22.51;ReadPosRankSum=0.706;VQSLOD=5.6963;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:37:99:0,99,1107	1/1:0,12:12:36.02:329,36,0	0/0:22,0:21:22.05:0,22,245	0/0:16,0:16:28.87:0,29,283	1/1:3,23:26:62.90:558,63,0	1/1:3,22:25:66.03:604,66,0	1/1:3,12:15:36.01:329,36,0	1/1:11,22:33:66.02:604,66,0	1/1:1,32:33:90.05:824,90,0	1/1:3,28:31:86.97:774,87,0	1/1:1,25:26:69.03:631,69,0	0/0:22,0:22:60.11:0,60,675	0/0:16,0:16:42.10:0,42,465	0/0:30,0:30:87.24:0,87,993	1/1:3,21:24:54.02:494,54,0	1/1:0,27:27:72.04:659,72,0	1/1:0,23:23:60.03:549,60,0	1/1:0,20:20:51.03:467,51,0	1/1:6,21:27:62.33:533,62,0	1/1:1,34:35:92.77:806,93,0	1/1:3,16:19:36.02:329,36,0	0/0:17,0:17:51.15:0,51,589	0/0:30,0:30:84.20:0,84,924	0/0:18,0:18:48.13:0,48,543	1/1:3,19:22:51.02:467,51,0	0/0:26,2:28:17.27:0,17,691	0/0:31,0:31:90.25:0,90,1026	0/0:9,0:9:27.08:0,27,311
chr10	7369652	.	T	TGGAG	5672.47	PASS	AB=0.979;AC=30;AF=0.536;AN=56;BaseQRankSum=5.306;DP=464;FS=7.632;HRun=0;HaplotypeScore=111.1906;InbreedingCoeff=0.8439;MQ=55.88;MQ0=0;MQRankSum=-9.983;QD=24.66;ReadPosRankSum=-3.157;VQSLOD=3.4727;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:81.24:0,81,1289	1/1:1,3:4:11.94:188,12,0	0/0:21,0:18:17.08:0,17,224	0/1:18,0:15:6.71:7,0,283	1/1:5,4:9:9.03:225,9,0	0/0:18,0:18:27.09:0,27,454	0/0:26,0:26:63.18:0,63,1014	1/1:16,1:17:30.10:568,30,0	0/0:20,0:20:57.19:0,57,921	1/1:12,11:23:45.14:1018,45,0	1/1:3,6:9:14.99:232,15,0	1/1:11,4:15:30.06:526,30,0	1/1:5,3:8:21.07:393,21,0	1/1:8,3:11:12.04:282,12,0	1/1:13,6:19:36.12:679,36,0	0/0:22,0:22:57.18:0,57,936	0/0:32,0:32:75.19:0,75,1149	1/1:12,2:14:30:474,30,0	0/0:7,0:7:15.05:0,15,247	0/0:15,0:15:6.23:0,6,332	1/1:19,5:24:23.68:411,24,0	1/1:6,6:12:20.94:307,21,0	1/1:9,0:9:6.02:93,6,0	1/1:10,5:15:15.05:269,15,0	0/0:11,0:11:33.09:0,33,510	0/1:22,1:23:1.57:2,0,815	0/0:14,0:14:27.06:0,27,401	0/0:9,0:9:21.07:0,21,352
chr10	7369687	.	AG	A	2529.70	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=5.700;DP=473;FS=2.052;HRun=6;HaplotypeScore=116.1884;InbreedingCoeff=0.9870;MQ=66.55;MQ0=2;MQRankSum=-9.777;QD=23.00;ReadPosRankSum=0.301;VQSLOD=2.2136;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:96.25:0,96,1216	1/1:0,5:5:15.04:160,15,0	0/0:23,0:18:47.93:0,48,561	0/0:37,0:29:33.41:0,33,429	1/1:3,7:10:21.05:224,21,0	0/0:10,0:10:30.10:0,30,392	0/0:28,0:28:81.01:0,81,984	1/1:4,12:16:35.90:387,36,0	0/0:20,0:20:54.15:0,54,693	1/1:2,16:18:51.13:547,51,0	1/1:2,10:12:24.06:258,24,0	0/0:13,0:13:30.08:0,30,366	0/0:12,0:12:36.09:0,36,443	0/0:10,0:10:30.10:0,30,392	1/1:0,20:20:60.15:644,60,0	0/0:24,0:24:66.20:0,66,841	0/0:33,0:33:93.27:0,93,1192	1/1:0,8:8:24.06:258,24,0	0/0:12,0:12:21.03:0,21,255	0/0:13,0:13:33.11:0,33,431	1/1:7,14:21:25:259,25,0	0/0:14,0:14:39.07:0,39,477	0/0:7,0:7:12.04:0,12,158	0/0:16,0:16:36.58:0,37,450	0/0:14,0:14:36.10:0,36,447	0/0:18,1:19:18.92:0,19,586	0/0:15,0:15:45.15:0,45,592	0/0:7,0:7:18.03:0,18,207
chr10	7369730	.	T	TC	9889.03	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=13.894;DP=510;FS=18.910;HRun=1;HaplotypeScore=99.6948;InbreedingCoeff=0.9840;MQ=74.08;MQ0=0;MQRankSum=-6.722;QD=43.37;ReadPosRankSum=1.413;VQSLOD=2.8253;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,123,1708	1/1:0,9:9:27.09:429,27,0	0/0:19,0:20:53.76:0,54,703	0/0:20,0:20:48.40:0,48,594	1/1:2,14:16:39.13:617,39,0	0/0:14,0:14:42.14:0,42,587	0/0:24,0:24:72.22:0,72,987	1/1:4,25:29:84.24:1288,84,0	0/0:21,0:21:63.21:0,63,880	1/1:2,22:24:66.22:1049,66,0	1/1:1,6:7:18.06:285,18,0	1/1:0,15:15:39.13:619,39,0	1/1:0,16:16:48.16:765,48,0	1/1:1,13:14:36.12:573,36,0	1/1:0,27:27:78.26:1223,78,0	0/0:27,0:27:78.26:0,78,1090	0/0:25,0:25:75.21:0,75,1008	1/1:0,9:9:27.09:430,27,0	0/0:12,0:12:36.12:0,36,504	0/0:18,0:18:51.17:0,51,713	1/1:0,23:23:60.20:936,60,0	1/1:0,15:15:42.14:669,42,0	1/1:0,10:10:24.08:383,24,0	1/1:0,14:14:39.13:623,39,0	0/0:21,0:21:57.17:0,57,779	0/0:16,0:16:48.16:0,48,670	0/0:20,0:20:60.20:0,60,838	0/0:2,0:2:6.02:0,6,84
chr10	7370083	.	CGCGA	C	868.53	PASS	AB=0.890;AC=12;AF=0.214;AN=56;BaseQRankSum=3.841;DP=565;FS=21.923;HRun=0;HaplotypeScore=146.5944;InbreedingCoeff=-0.2947;MQ=71.41;MQ0=6;MQRankSum=-5.627;QD=3.88;ReadPosRankSum=-2.619;VQSLOD=0.0157;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:37:96.23:0,96,2226	0/1:14,1:14:28.62:29,0,568	0/0:31,0:23:68.86:0,69,1344	0/0:27,1:20:59.96:0,60,1198	0/0:8,0:8:15.03:0,15,286	0/1:18,0:18:12.29:12,0,734	0/0:28,0:28:18.71:0,19,710	0/1:25,3:28:99:187,0,1158	0/1:11,11:21:88.18:88,0,330	0/1:24,1:25:99:115,0,1036	0/0:16,0:16:25.02:0,25,539	0/0:18,9:27:48.07:0,48,920	0/0:15,0:15:14.52:0,15,730	0/1:7,11:17:26.97:27,0,302	0/0:16,0:16:32.89:0,33,602	0/1:20,0:20:47.20:47,0,585	0/0:21,2:23:4.48:0,4,1021	0/1:6,0:6:42.71:43,0,201	0/1:9,7:16:99:327,0,393	0/1:12,0:12:15.58:16,0,518	0/1:30,1:30:94.31:94,0,748	0/0:26,1:27:7.94:0,8,1009	0/1:12,1:13:32.87:33,0,287	0/0:23,1:23:32.73:0,33,642	0/0:17,0:17:17.35:0,17,815	0/0:19,0:19:51.16:0,51,1101	0/0:22,0:22:63.67:0,64,1152	0/0:1,0:1:3.01:0,3,62
chr10	7370087	.	A	AACACACACACACAC	7754	PASS	AB=0.800;AC=45;AF=0.865;AN=52;BaseQRankSum=-0.368;DP=617;FS=6.316;HRun=0;HaplotypeScore=239.9123;InbreedingCoeff=0.5378;MQ=59.37;MQ0=6;MQRankSum=-3.937;QD=15.54;ReadPosRankSum=0.889;VQSLOD=2.9150;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:38:26.08:0,26,948	1/1:15,0:14:15.04:422,15,0	0/0:28,0:18:3.01:0,3,46	./.	1/1:6,2:15:0.47:1,0,0	1/1:12,0:25:12.88:212,13,0	1/1:20,0:30:15.68:496,16,0	1/1:26,0:26:30.10:634,30,0	1/1:19,0:20:11.79:288,12,0	1/1:22,0:22:30.10:835,30,0	1/1:15,0:15:9.03:295,9,0	1/1:26,0:26:18.06:396,18,0	1/1:14,0:25:3.01:103,3,0	1/1:17,0:16:9.92:264,10,0	1/1:10,7:23:3.01:199,3,0	1/1:13,0:28:18.04:497,18,0	1/1:24,0:25:24.80:547,25,0	1/1:5,3:11:12.04:603,12,0	1/1:14,0:14:22.95:667,23,0	1/1:9,0:13:6.02:115,6,0	1/1:29,0:28:15.05:417,15,0	1/1:30,0:30:8.89:174,9,0	1/1:10,0:16:6.02:205,6,0	1/1:20,0:32:8.82:274,9,0	1/1:15,0:20:3.01:103,3,0	0/1:15,0:20:9.35:9,0,206	0/0:13,0:26:32.15:0,32,496	./.
chr10	7371110	.	ATGTGTGTGTGTGTG	A	4115.68	PASS	AB=0.785;AC=19;AF=0.339;AN=56;BaseQRankSum=8.764;DP=775;FS=58.055;HRun=0;HaplotypeScore=276.1978;InbreedingCoeff=0.4596;MQ=61.52;MQ0=13;MQRankSum=-7.586;QD=13.11;ReadPosRankSum=1.595;VQSLOD=0.7684;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:39:39.60:0,40,1509	0/1:10,0:15:11.77:12,0,35	0/0:31,0:23:1.55:0,2,4	0/0:43,0:36:14.98:0,15,239	0/0:18,0:19:9.02:0,9,163	1/1:8,2:10:8.70:245,9,0	1/1:10,8:17:8.45:294,8,0	0/0:28,0:29:18.89:0,19,278	1/1:25,5:30:21.06:620,21,0	0/0:21,0:30:24.51:0,25,540	0/0:6,0:11:12.01:0,12,131	0/0:31,0:31:33.11:0,33,1779	0/0:28,0:29:39.12:0,39,2155	0/0:28,0:28:42.14:0,42,2332	0/1:32,0:44:49.38:49,0,215	1/1:12,20:32:36.12:1409,36,0	0/1:26,12:38:74.96:452,0,75	0/0:23,0:24:0.56:0,1,237	1/1:26,0:24:2.90:28,3,0	1/1:13,7:19:9.03:248,9,0	0/0:53,0:52:30.04:0,30,466	0/0:22,0:24:30.02:0,30,1655	0/0:23,0:22:33.10:0,33,1446	0/0:39,0:39:48.16:0,48,3059	1/1:17,10:26:9.03:324,9,0	0/1:23,1:33:99:223,0,586	0/1:17,1:19:99:211,0,206	0/0:4,0:4:9.02:0,9,179
chr10	7371218	.	GGT	G	4597.41	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=-7.890;DP=822;FS=1.903;HRun=0;HaplotypeScore=145.6994;InbreedingCoeff=0.8280;MQ=60.46;MQ0=19;MQRankSum=4.922;QD=15.74;ReadPosRankSum=6.001;VQSLOD=4.9479;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,1:36:8.97:0,9,707	1/1:5,3:8:17.89:187,18,0	0/0:53,0:20:6.02:0,6,77	0/0:41,0:19:17.71:0,18,244	1/1:5,17:21:48.31:514,48,0	0/0:8,0:22:17.34:0,17,136	0/0:19,0:24:25.80:0,26,194	1/1:15,12:25:21.01:214,21,0	0/0:12,0:33:24.63:0,25,221	1/1:17,27:45:86.17:915,86,0	1/1:4,10:15:30.98:349,31,0	0/0:5,0:26:5.99:0,6,50	0/0:5,0:34:14.15:0,14,127	0/0:4,0:27:6.01:0,6,63	1/1:19,22:42:50.12:945,50,0	0/0:11,0:21:40.03:0,40,288	0/0:14,0:22:28.96:0,29,255	1/1:14,19:33:12.30:475,12,0	0/0:20,0:26:27.57:0,28,222	0/1:14,0:28:0.35:0,0,127	1/1:25,43:69:89.49:997,89,0	0/0:12,0:37:19.68:0,20,101	0/0:6,0:11:11.75:0,12,104	0/0:13,0:37:4.25:0,4,29	0/0:8,0:27:29.92:0,30,250	0/0:28,0:28:47.99:0,48,334	0/0:18,0:18:16.69:0,17,125	0/0:3,0:2:2.99:0,3,23
chr10	7376011	.	A	AG	4662.99	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-5.909;DP=597;FS=1.193;HRun=7;HaplotypeScore=72.1540;InbreedingCoeff=0.9962;MQ=85.50;MQ0=0;MQRankSum=-3.211;QD=25.48;ReadPosRankSum=-0.511;VQSLOD=5.2091;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:61,0:61:99:0,153,1475	1/1:3,6:9:15.05:181,15,0	0/0:21,0:21:53.96:0,54,499	0/0:18,0:18:29.77:0,30,271	1/1:4,31:35:84.26:1012,84,0	0/0:20,0:20:48.07:0,48,459	0/0:20,0:20:54.03:0,54,511	1/1:5,16:21:45.01:498,45,0	0/0:15,0:14:30.04:0,30,290	1/1:11,11:22:30.09:362,30,0	1/1:3,22:26:59.96:671,60,0	0/0:25,0:25:72.09:0,72,685	0/0:13,0:13:36.03:0,36,341	0/0:13,0:13:36:0,36,333	1/1:1,19:20:48.08:561,48,0	0/0:17,0:17:48.08:0,48,463	0/0:20,0:20:51.08:0,51,492	1/1:1,13:14:33.10:399,33,0	0/0:19,0:19:48.06:0,48,459	0/0:26,0:26:63.08:0,63,604	1/1:4,32:36:81.25:979,81,0	0/0:14,0:14:36.05:0,36,347	0/0:14,0:14:36.06:0,36,348	0/0:20,0:20:54.06:0,54,514	0/0:26,0:26:69.10:0,69,663	0/0:16,0:16:48.08:0,48,463	0/0:28,0:28:72.11:0,72,695	0/0:8,0:8:21.01:0,21,196
chr10	7376139	.	TTGTGTGTGTGTG	T	2437.78	PASS	AB=0.746;AC=14;AF=0.259;AN=54;BaseQRankSum=7.193;DP=660;FS=3.825;HRun=0;HaplotypeScore=225.7776;InbreedingCoeff=0.6455;MQ=68.84;MQ0=15;MQRankSum=-5.951;QD=16.14;ReadPosRankSum=-1.184;VQSLOD=2.4557;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:52:45.15:0,45,2126	1/1:2,1:3:3.48:104,3,0	0/0:33,0:22:0:0,0,0	0/0:31,0:22:9.03:0,9,232	1/1:16,7:24:15.52:475,16,0	0/0:29,0:34:21.54:0,22,865	0/0:27,0:27:26.37:0,26,1089	1/1:31,0:29:0.27:1,0,0	0/0:22,0:27:23.12:0,23,976	1/1:22,6:27:18.53:624,19,0	1/1:10,7:18:15.05:305,15,0	0/0:19,0:30:42.47:0,42,1952	0/0:14,0:21:20.84:0,21,1044	0/0:13,0:20:33.11:0,33,1540	0/1:15,10:25:49.52:804,0,50	0/0:11,0:19:12.04:0,12,630	0/0:18,0:27:42.12:0,42,2132	1/1:5,3:8:5.50:207,6,0	0/0:20,0:24:31.34:0,31,1278	0/0:12,0:20:12.70:0,13,621	./.	0/0:15,0:25:23.32:0,23,1047	0/0:18,0:19:24.08:0,24,1156	0/0:17,0:29:36.11:0,36,1566	0/0:8,0:16:21.07:0,21,869	0/1:10,1:14:79.84:80,0,654	0/0:12,0:25:42.14:0,42,1412	0/0:7,0:7:9.03:0,9,436
chr10	7377217	.	G	GA	5987.48	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-15.099;DP=719;FS=5.401;HRun=8;HaplotypeScore=65.1800;InbreedingCoeff=0.9986;MQ=74.50;MQ0=0;MQRankSum=-1.378;QD=30.09;ReadPosRankSum=-2.624;VQSLOD=3.9488;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:87.01:0,87,790	1/1:2,9:11:27.08:312,27,0	0/0:26,0:24:53.45:0,53,456	0/0:16,0:16:20.84:0,21,205	1/1:0,33:33:99:1096,99,0	0/0:25,0:25:69.03:0,69,631	0/0:26,0:26:72.01:0,72,654	1/1:5,34:39:99:1177,102,0	0/0:31,0:31:93.05:0,93,851	1/1:3,31:34:96.28:1104,96,0	1/1:1,20:22:62.93:689,63,0	0/0:33,0:33:74.99:0,75,678	0/0:21,0:21:63.02:0,63,572	0/0:24,0:24:59.97:0,60,535	1/1:3,32:35:84.25:969,84,0	0/0:29,0:29:81.03:0,81,738	0/0:30,0:30:84.04:0,84,769	1/1:1,9:10:24.07:275,24,0	0/0:33,0:33:84.02:0,84,763	0/0:31,0:31:78:0,78,706	1/1:4,11:15:33.05:365,33,0	0/0:30,0:30:78.02:0,78,708	0/0:30,0:30:84.04:0,84,769	0/0:16,0:16:48:0,48,433	0/0:15,0:15:45.02:0,45,412	0/0:31,0:31:84.03:0,84,765	0/0:31,0:31:90.05:0,90,823	0/0:9,0:9:27.01:0,27,247
chr10	7378749	.	GTATTGT	G	17309.17	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=19.319;DP=672;FS=10.089;HRun=0;HaplotypeScore=152.7119;InbreedingCoeff=0.9981;MQ=85.99;MQ0=0;MQRankSum=-20.127;QD=59.69;ReadPosRankSum=1.945;VQSLOD=4.9474;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:35:99:0,108,3525	0/0:7,0:7:21.07:0,21,757	0/0:25,0:25:72.21:0,72,2274	0/0:29,0:29:86.59:0,87,2592	0/0:34,0:34:99:0,102,3582	1/1:3,22:24:69.24:1632,69,0	1/1:1,17:18:42.14:1008,42,0	0/0:31,0:31:90.30:0,90,3047	1/1:1,26:27:72.25:1711,72,0	0/0:35,0:35:99:0,102,3597	0/0:31,0:31:90.31:0,90,3228	1/1:2,12:14:36.12:863,36,0	1/1:1,28:29:81.28:1899,81,0	1/1:1,21:22:54.19:1296,54,0	0/0:28,0:28:78.25:0,78,2685	1/1:1,28:29:69.24:1642,69,0	1/1:2,14:16:39.13:924,39,0	0/0:23,0:23:69.20:0,69,2372	1/1:1,15:16:42.13:900,42,0	1/1:1,27:28:78.27:1836,78,0	0/0:30,0:30:87.30:0,87,3062	1/1:0,22:22:60.21:1403,60,0	1/1:1,16:17:36.12:846,36,0	1/1:0,9:9:18.06:414,18,0	1/1:1,17:18:39.13:936,39,0	0/0:22,0:22:66.20:0,66,2073	0/0:42,0:42:99:0,120,4261	0/0:9,0:9:27.09:0,27,941
chr10	7379406	.	CG	C	4840.31	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=10.318;DP=658;FS=24.834;HRun=4;HaplotypeScore=68.7297;InbreedingCoeff=0.9923;MQ=83.26;MQ0=0;MQRankSum=-0.181;QD=25.61;ReadPosRankSum=1.343;VQSLOD=3.1124;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,99,1322	1/1:3,6:9:12.04:144,12,0	0/0:19,0:20:45.13:0,45,568	0/0:24,0:24:24.68:0,25,442	1/1:1,25:25:60.18:719,60,0	0/0:22,0:22:57.17:0,57,762	0/0:29,0:29:81.23:0,81,1096	1/1:15,12:27:30.08:348,30,0	0/0:23,0:23:63.20:0,63,864	1/1:1,24:25:72.22:860,72,0	1/1:1,7:8:17.80:216,18,0	0/0:26,0:26:75.24:0,75,1030	0/0:26,0:26:78.24:0,78,1058	0/0:29,0:29:81.26:0,81,1116	1/1:3,20:23:54.16:648,54,0	0/0:21,0:21:54.17:0,54,741	0/0:37,0:37:99:0,102,1391	1/1:2,25:27:69.21:826,69,0	0/0:15,0:15:39.13:0,39,546	0/0:18,0:18:39.11:0,39,512	1/1:7,37:44:90.27:1079,90,0	0/0:16,0:16:36.12:0,36,497	0/0:22,0:22:51.16:0,51,707	0/0:28,0:28:78.25:0,78,1076	0/0:27,0:27:72.23:0,72,991	0/0:21,0:21:60.15:0,60,802	0/0:23,0:23:54.18:0,54,755	0/0:7,0:7:21.07:0,21,293
chr10	7379617	.	TACACACAC	T	2365.32	PASS	AB=0.961;AC=31;AF=0.620;AN=50;BaseQRankSum=4.209;DP=602;FS=0.000;HRun=0;HaplotypeScore=179.7605;InbreedingCoeff=0.0199;MQ=61.19;MQ0=19;MQRankSum=0.782;QD=5.29;ReadPosRankSum=1.169;VQSLOD=2.3624;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:36:36.10:0,36,852	0/0:12,0:14:5.99:0,6,48	./.	./.	0/0:12,0:9:5.47:0,5,36	1/1:16,3:16:14.04:80,14,0	1/1:17,2:19:14.84:164,15,0	0/0:34,0:25:18.10:0,18,103	1/1:16,1:15:15.81:230,16,0	0/1:25,0:24:99:175,0,107	0/1:15,0:16:19.34:36,0,19	0/1:22,0:22:11.30:202,0,11	1/1:22,0:23:11:200,11,0	0/1:15,0:15:24.64:124,0,25	1/1:18,0:17:5.73:124,6,0	1/1:10,3:13:0.76:26,1,0	1/1:16,0:15:8.36:162,8,0	0/1:26,0:26:99:121,0,105	1/1:9,1:10:11.22:143,11,0	1/1:28,2:28:11.74:77,12,0	0/1:30,0:26:1.06:1,0,68	0/1:26,0:24:30.42:65,0,30	0/1:14,0:15:2.60:29,0,3	0/1:24,0:24:58.13:58,0,80	0/1:24,4:27:11.57:74,0,12	0/1:24,2:27:48.10:264,0,48	1/1:20,3:22:8.89:172,9,0	./.
chr10	7379647	.	C	CACAG	2639.80	PASS	AB=0.975;AC=25;AF=0.446;AN=56;BaseQRankSum=0.195;DP=798;FS=46.893;HRun=0;HaplotypeScore=153.0262;InbreedingCoeff=-0.1473;MQ=36.40;MQ0=86;MQRankSum=0.979;QD=4.33;ReadPosRankSum=6.416;VQSLOD=1.2018;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:47:67.33:0,67,705	0/0:13,1:14:14.47:0,14,92	0/0:5,0:4:3.01:0,3,41	0/0:8,0:2:3.01:0,3,39	1/1:19,0:14:8.67:52,9,0	0/1:36,0:31:13.98:14,0,53	0/1:31,0:24:15.65:16,0,50	0/1:53,0:29:72.10:72,0,274	0/0:31,0:28:13.71:0,14,144	0/1:34,0:29:99:284,0,158	0/1:28,0:24:7.94:148,0,8	1/1:19,2:20:25.80:340,26,0	0/1:28,1:25:39.51:394,0,40	0/1:17,2:19:0.13:270,0,0	1/1:28,0:24:17.73:266,18,0	0/0:20,0:19:14.78:0,15,102	0/1:18,0:17:39.09:39,0,65	0/1:33,1:33:99:290,0,130	0/1:20,0:11:66.34:83,0,66	0/1:28,0:24:31.77:34,0,32	0/1:62,0:46:22.50:124,0,22	0/1:23,0:20:26.28:96,0,26	1/1:21,0:19:2.07:48,2,0	0/1:45,2:38:47.88:102,0,48	0/0:38,0:33:13.26:0,13,110	0/1:36,0:28:50.11:50,0,167	1/1:13,0:11:3.85:87,4,0	0/0:14,0:11:17.90:0,18,132
chr10	7379689	.	G	GAC	5065.38	PASS	AB=0.648;AC=34;AF=0.739;AN=46;BaseQRankSum=-3.519;DP=773;FS=0.000;HRun=0;HaplotypeScore=99.2927;InbreedingCoeff=0.1363;MQ=36.30;MQ0=87;MQRankSum=-4.155;QD=8.29;ReadPosRankSum=1.159;VQSLOD=4.4366;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:39:68.67:0,69,839	1/1:5,9:14:6.49:101,6,0	./.	./.	./.	0/1:17,24:39:36.66:42,0,37	0/0:17,23:31:3.01:0,3,38	1/1:35,15:24:36.11:523,36,0	0/1:9,21:29:6.92:138,0,7	0/1:20,4:17:36.77:340,0,37	./.	1/1:9,18:24:9.03:150,9,0	0/1:9,24:29:6.82:483,0,7	1/1:11,13:22:18.06:294,18,0	1/1:14,13:20:6.02:100,6,0	1/1:6,14:20:6.01:98,6,0	0/1:5,19:24:14.06:292,0,14	1/1:10,21:31:13.17:590,13,0	1/1:18,8:10:21.07:341,21,0	0/0:13,9:19:4.40:0,4,73	1/1:29,47:63:9.03:151,9,0	./.	1/1:7,11:16:6.02:100,6,0	1/1:14,30:35:12.04:201,12,0	1/1:11,14:21:3.01:50,3,0	1/1:19,17:26:22.27:725,22,0	1/1:13,1:9:3.48:50,3,0	0/1:10,9:17:14.11:296,0,14
chr10	7379757	.	GAC	G	1054.48	PASS	AB=0.857;AC=7;AF=0.130;AN=54;BaseQRankSum=4.641;DP=813;FS=0.628;HRun=0;HaplotypeScore=101.5655;InbreedingCoeff=0.7358;MQ=48.17;MQ0=40;MQRankSum=1.357;QD=16.74;ReadPosRankSum=0.787;VQSLOD=3.1186;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,1:43:49.11:0,49,1308	0/1:5,1:6:26.14:26,0,139	./.	0/0:17,0:2:5.97:0,6,63	0/0:21,0:21:42.14:0,42,689	0/0:30,0:30:33.11:0,33,543	0/0:43,0:42:82.76:0,83,1244	0/0:52,1:30:72.21:0,72,1101	0/0:23,0:23:33.11:0,33,552	0/0:30,0:28:75.24:0,75,1214	0/0:13,0:13:39.11:0,39,588	0/0:31,0:31:43.70:0,44,685	0/0:29,0:27:42.12:0,42,641	0/0:26,0:24:39.13:0,39,646	0/0:22,0:21:23.79:0,24,401	0/0:26,0:26:42.61:0,43,703	0/0:31,0:31:35.99:0,36,1010	0/0:30,0:30:60.20:0,60,979	0/0:31,1:16:3.86:0,4,528	0/0:18,0:17:39.13:0,39,633	0/0:103,1:96:99:0,168,2704	0/0:19,1:19:48.16:0,48,760	0/0:23,0:23:58.69:0,59,880	0/0:46,0:45:80.92:0,81,1274	0/0:23,1:24:10.01:0,10,668	1/1:14,14:23:9.66:523,10,0	1/1:3,14:15:33.11:417,33,0	1/1:2,10:12:18.06:229,18,0
chr10	7379853	.	GACACACAGAC	G	4067.26	PASS	AB=1.000;AC=39;AF=0.722;AN=54;BaseQRankSum=0.713;DP=670;FS=1.810;HRun=0;HaplotypeScore=155.4713;InbreedingCoeff=0.0321;MQ=39.27;MQ0=80;MQRankSum=0.549;QD=7.05;ReadPosRankSum=-1.130;VQSLOD=2.7426;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:38:17.05:0,17,746	0/1:12,0:12:28.97:92,0,29	./.	0/0:13,0:1:3:0,3,25	1/1:14,0:14:8.45:71,8,0	1/1:22,1:17:11.85:99,12,0	0/1:38,0:28:6.84:203,0,7	1/1:25,0:10:5.94:41,6,0	1/1:27,0:22:33.50:296,33,0	1/1:23,1:16:4.24:170,4,0	1/1:13,0:12:3:28,3,0	1/1:18,0:17:20.73:281,21,0	1/1:25,2:20:20.80:179,21,0	1/1:23,0:18:19.77:192,20,0	1/1:23,0:20:6.42:44,6,0	0/1:14,0:12:20.68:21,0,30	0/1:31,0:30:46.46:213,0,46	1/1:22,0:18:27.68:255,28,0	0/1:32,0:20:35.99:167,0,36	0/0:25,0:21:2.50:0,2,5	0/1:50,0:36:12.84:43,0,13	1/1:26,3:29:32.44:388,32,0	1/1:20,0:16:11.29:122,11,0	1/1:43,0:36:46.89:702,47,0	1/1:14,0:12:4.20:28,4,0	0/1:31,0:26:99:229,0,277	0/1:14,0:13:5.12:5,0,143	0/1:9,0:8:20.16:200,0,20
chr10	7379855	.	CACACAG	C	3654.31	PASS	AB=1.000;AC=42;AF=0.778;AN=54;BaseQRankSum=1.635;DP=667;FS=1.135;HRun=0;HaplotypeScore=132.9872;InbreedingCoeff=0.1045;MQ=39.01;MQ0=78;MQRankSum=1.142;QD=5.93;ReadPosRankSum=-0.208;VQSLOD=2.6124;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:45,0:37:41.04:41,0,506	0/1:12,0:12:18.18:61,0,18	./.	0/0:13,0:1:3:0,3,25	1/1:16,0:15:4.47:65,4,0	1/1:24,0:17:11.63:91,12,0	1/1:35,1:26:11.01:292,11,0	1/1:25,0:8:5.89:41,6,0	1/1:27,0:22:35.67:327,36,0	0/1:24,0:17:20.62:133,0,21	0/0:13,0:12:0.46:0,0,1	1/1:17,0:16:28.83:224,29,0	1/1:28,0:21:20.50:132,21,0	1/1:23,0:18:6.49:108,6,0	1/1:21,0:18:5.95:43,6,0	1/1:14,0:12:0.12:38,0,0	1/1:30,1:30:16.67:299,17,0	1/1:23,0:19:34.82:235,35,0	1/1:30,1:19:7.74:341,8,0	1/1:7,17:20:5.12:25,5,0	1/1:51,0:36:8.34:66,8,0	1/1:29,0:29:31.70:291,32,0	1/1:20,0:16:11.61:91,12,0	0/1:42,0:35:31.89:375,0,32	1/1:14,0:12:14.88:190,15,0	0/1:30,0:25:82.47:82,0,274	0/0:17,0:16:36.74:0,37,216	0/1:9,0:8:22.63:62,0,23
chr10	7379859	.	CAG	C	3107.15	PASS	AB=0.957;AC=40;AF=0.741;AN=54;BaseQRankSum=2.077;DP=673;FS=7.798;HRun=0;HaplotypeScore=116.5886;InbreedingCoeff=-0.0495;MQ=39.44;MQ0=74;MQRankSum=2.291;QD=4.89;ReadPosRankSum=-1.010;VQSLOD=2.3600;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:47,0:39:99:117,0,312	0/1:12,0:12:27.24:59,0,27	./.	0/0:13,0:1:3:0,3,25	1/1:16,0:15:10.86:103,11,0	1/1:26,0:19:12.39:91,12,0	1/1:36,0:27:25.90:270,26,0	0/1:27,0:9:15.32:29,0,15	1/1:24,1:20:34.80:240,35,0	0/1:23,0:17:16.58:107,0,17	0/1:3,10:12:10.31:10,0,14	1/1:18,0:17:38.02:255,38,0	1/1:28,0:21:24.74:144,25,0	1/1:21,0:16:5.82:107,6,0	1/1:22,0:19:5.95:43,6,0	1/1:15,0:13:3.95:58,4,0	1/1:30,0:29:28.33:291,28,0	1/1:23,0:19:0.35:165,0,0	0/1:31,0:20:21.27:216,0,21	0/1:23,0:21:11.43:11,0,15	0/1:51,0:37:39.48:67,0,39	1/1:27,1:28:34.69:271,35,0	1/1:21,0:18:17.21:125,17,0	1/1:45,0:38:38.32:325,38,0	1/1:15,0:13:16.55:123,17,0	0/1:30,0:25:18.18:18,0,291	0/0:17,0:16:20.43:0,20,179	0/1:9,0:8:18.66:19,0,35
chr10	7379861	.	GAC	G	886.23	PASS	AB=0.984;AC=28;AF=0.560;AN=50;BaseQRankSum=-0.087;DP=678;FS=1.969;HRun=0;HaplotypeScore=124.5579;InbreedingCoeff=-0.2777;MQ=39.49;MQ0=72;MQRankSum=0.149;QD=1.57;ReadPosRankSum=1.802;VQSLOD=2.4506;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:48,1:42:17.93:177,18,0	0/1:12,1:13:19.69:20,0,87	./.	./.	0/1:17,2:18:24.29:25,0,24	0/1:25,0:19:0:0,0,0	0/1:32,0:23:6.72:7,0,30	0/0:29,0:12:6.32:0,6,34	1/1:23,1:19:1.41:30,1,0	0/1:23,0:17:21.55:22,0,59	0/1:16,0:15:15.91:16,0,72	0/1:17,0:16:0.79:85,0,1	1/1:26,1:20:11.06:104,11,0	0/1:20,0:15:21.31:33,0,21	./.	0/1:16,0:14:21.48:21,0,28	0/1:30,0:29:18.07:22,0,18	0/1:22,0:18:15.40:15,0,88	0/1:28,0:18:8.95:9,0,37	0/0:24,0:22:5.14:0,5,46	0/1:54,0:40:24.67:25,0,119	1/1:28,0:28:8.40:77,8,0	1/1:20,1:18:5.47:62,5,0	0/1:45,0:38:68.33:118,0,68	0/0:20,0:18:11.30:0,11,90	0/1:27,0:25:9.46:66,0,9	0/1:16,0:15:20.28:20,0,30	1/1:6,0:8:11.65:80,12,0
chr10	7381618	.	T	TTAATTC	25668.61	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=3.466;DP=606;FS=3.677;HRun=0;HaplotypeScore=134.9658;InbreedingCoeff=0.9987;MQ=71.90;MQ0=0;MQRankSum=-18.558;QD=72.92;ReadPosRankSum=-2.646;VQSLOD=4.8229;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,126,2899	0/0:9,0:9:24.08:0,24,560	0/0:13,0:13:32.92:0,33,597	0/0:19,0:19:38.29:0,38,945	0/0:31,0:31:84.23:0,84,1801	1/1:8,0:20:24.30:1050,24,0	1/1:11,0:30:60.41:1950,60,0	0/0:21,0:21:60.19:0,60,1279	1/1:9,0:23:54.18:1407,54,0	0/0:20,0:20:57.20:0,57,1325	0/0:16,0:16:42.13:0,42,933	1/1:5,17:23:60.21:2035,60,0	1/1:1,10:12:33.11:1120,33,0	1/1:5,22:29:69.24:2410,69,0	0/0:22,0:22:63.20:0,63,1417	1/1:1,0:20:54.19:1537,54,0	1/1:6,0:25:54.18:1460,54,0	0/0:18,0:18:48.16:0,48,1114	1/1:11,0:26:72.21:1755,72,0	1/1:3,0:15:42.14:991,42,0	0/0:36,0:36:99:0,102,2326	1/1:4,15:19:51.17:1470,51,0	1/1:4,13:18:42.14:1222,42,0	1/1:7,9:16:30.57:996,31,0	1/1:3,0:22:37.03:1293,37,0	1/1:7,18:25:69.24:2326,69,0	1/1:6,16:22:60.21:1951,60,0	1/1:0,7:7:21.07:698,21,0
chr10	7383887	.	A	AGTGTGTGT	3752.57	PASS	AB=1.000;AC=30;AF=0.625;AN=48;BaseQRankSum=-3.175;DP=668;FS=13.166;HRun=0;HaplotypeScore=254.9943;InbreedingCoeff=0.1543;MQ=49.16;MQ0=9;MQRankSum=-1.895;QD=8.96;ReadPosRankSum=0.005;VQSLOD=1.1106;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:52:75.99:0,76,2200	0/1:17,0:17:13.94:14,0,32	0/0:32,0:16:2.74:0,3,12	./.	0/0:26,0:26:2.98:0,3,43	./.	1/1:22,0:21:8.79:114,9,0	1/1:28,0:28:11.17:80,11,0	0/1:26,0:26:6.74:47,0,7	0/1:26,0:26:95.21:221,0,95	1/1:19,0:21:1.22:3,1,0	1/1:8,9:20:3.01:124,3,0	1/1:14,12:26:18.06:641,18,0	1/1:3,10:15:6.01:248,6,0	0/1:26,0:26:4.91:5,0,188	0/1:24,0:23:34.35:199,0,34	0/1:21,0:21:71.11:153,0,71	0/1:14,0:14:21.18:21,0,65	1/1:23,0:23:19.97:211,20,0	0/0:37,0:37:2.68:0,3,39	0/1:27,0:27:0:0,0,0	./.	./.	1/1:22,1:24:17.98:354,18,0	0/0:20,0:20:5.14:0,5,21	1/1:7,9:24:37.94:881,38,0	1/1:10,6:19:3.01:124,3,0	1/1:9,6:15:9.03:312,9,0
chr10	7383911	.	TGTGCGCGCGCGCGCACGTGC	T	6479.28	PASS	AB=1.000;AC=33;AF=0.635;AN=52;BaseQRankSum=4.492;DP=528;FS=7.580;HRun=0;HaplotypeScore=264.0381;InbreedingCoeff=0.4095;MQ=40.65;MQ0=11;MQRankSum=-6.699;QD=18.10;ReadPosRankSum=1.087;VQSLOD=2.5561;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:91.35:0,91,6895	1/1:10,0:10:8.72:189,9,0	0/0:14,0:4:5.70:0,6,31	./.	1/1:15,0:15:3.89:147,4,0	./.	0/1:23,0:22:99:205,0,135	1/1:23,0:23:21.13:315,21,0	1/1:23,1:24:15.80:667,16,0	1/1:21,0:21:39.81:681,40,0	1/1:18,0:18:4.26:137,4,0	0/0:18,0:18:10.81:0,11,492	0/1:20,0:20:99:113,0,488	0/1:16,0:16:2.32:2,0,176	1/1:20,0:20:18.03:737,18,0	1/1:21,0:20:26.48:812,26,0	1/1:14,1:15:27.08:596,27,0	1/1:9,0:9:9.30:302,9,0	1/1:14,0:13:32.06:769,32,0	1/1:25,0:25:3.48:133,3,0	1/1:17,0:17:3.14:30,3,0	0/0:21,0:21:5.75:0,6,226	0/0:18,0:18:3.01:0,3,219	0/1:35,0:35:99:166,0,2189	1/1:2,9:11:6.02:336,6,0	0/1:21,0:21:99:143,0,1342	0/0:21,0:21:18.53:0,19,1154	0/0:8,0:7:8.39:0,8,378
chr10	7383912	.	GTGCGCGCGCGCGCA	G	5312.02	PASS	AB=1.000;AC=30;AF=0.556;AN=54;BaseQRankSum=6.288;DP=512;FS=10.723;HRun=0;HaplotypeScore=227.9596;InbreedingCoeff=0.3926;MQ=40.41;MQ0=10;MQRankSum=-6.950;QD=16.24;ReadPosRankSum=2.862;VQSLOD=2.6428;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:91.90:0,92,5270	1/1:8,2:10:12:270,12,0	0/0:12,0:3:8.98:0,9,79	0/0:11,0:1:3.01:0,3,40	1/1:11,3:14:7.33:142,7,0	./.	0/1:22,0:21:99:133,0,148	1/1:16,0:16:33.03:533,33,0	0/1:24,0:24:6.91:422,0,7	1/1:16,3:19:54.17:1076,54,0	1/1:12,4:16:6.02:147,6,0	0/0:19,0:19:13.67:0,14,482	0/1:21,0:21:13.56:14,0,562	0/0:16,0:16:8.75:0,9,190	1/1:13,5:18:18.06:672,18,0	0/1:21,0:20:28.56:410,0,29	1/1:15,0:15:26.66:279,27,0	1/1:7,2:9:21.07:422,21,0	1/1:13,0:12:7.37:419,7,0	1/1:25,0:25:3.48:89,3,0	1/1:16,0:16:6.47:76,6,0	0/0:21,0:21:4.83:0,5,162	0/0:17,0:17:3.01:0,3,174	0/1:36,0:36:4.81:5,0,1801	1/1:11,0:11:6.02:191,6,0	0/1:21,0:21:14.93:15,0,1161	0/0:21,0:21:18.53:0,19,905	0/0:8,0:7:9.03:0,9,349
chr10	7383913	.	TGCGCGCGCGCGCACGTGC	T	6401.74	PASS	AB=0.950;AC=33;AF=0.635;AN=52;BaseQRankSum=4.848;DP=493;FS=6.259;HRun=0;HaplotypeScore=246.6060;InbreedingCoeff=0.4187;MQ=39.67;MQ0=9;MQRankSum=-6.430;QD=19.34;ReadPosRankSum=0.994;VQSLOD=3.0660;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:94.17:0,94,6892	1/1:10,0:10:8.72:175,9,0	0/0:10,0:2:5.75:0,6,41	./.	1/1:14,0:14:4.37:133,4,0	./.	0/1:14,2:20:99:205,0,128	1/1:16,0:16:21.18:317,21,0	1/1:8,15:23:15.66:751,16,0	1/1:18,0:18:39.81:639,40,0	1/1:15,0:15:4.26:137,4,0	0/0:19,0:19:13.72:0,14,577	0/1:19,0:19:99:110,0,511	0/1:15,0:15:2.27:2,0,157	1/1:17,0:17:18.03:667,18,0	1/1:15,5:19:26.59:931,27,0	1/1:15,0:15:27.08:565,27,0	1/1:9,0:9:9.71:303,10,0	1/1:11,0:12:32.05:768,32,0	1/1:10,15:25:3.48:159,3,0	1/1:14,0:14:3.95:31,4,0	0/0:18,0:18:5.75:0,6,221	0/0:16,0:16:3.01:0,3,223	0/1:36,0:36:99:163,0,2285	1/1:11,0:11:6.02:274,6,0	0/1:20,0:20:72.22:72,0,1226	0/0:22,0:22:21.54:0,22,1313	0/0:8,0:7:8.39:0,8,341
chr10	7383924	.	GCA	G	400.87	PASS	AB=1.000;AC=32;AF=0.640;AN=50;BaseQRankSum=8.121;DP=353;FS=5.430;HRun=0;HaplotypeScore=138.0849;InbreedingCoeff=0.5593;MQ=41.74;MQ0=12;MQRankSum=-6.798;QD=2.62;ReadPosRankSum=4.809;VQSLOD=2.0900;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:75.77:0,76,1435	1/1:2,0:2:2.88:15,3,0	./.	./.	1/1:3,0:3:2.88:15,3,0	./.	1/1:16,0:15:4.96:37,5,0	1/1:4,0:4:8.88:29,9,0	1/1:16,1:17:11.78:62,12,0	1/1:3,0:3:8.62:47,9,0	1/1:5,0:5:2.90:16,3,0	0/0:27,0:27:24.65:0,25,223	0/0:16,0:16:12.10:0,12,183	0/0:15,0:15:15.14:0,15,116	1/1:5,0:5:14.47:80,14,0	1/1:9,0:8:13.99:67,14,0	1/1:10,1:10:0.37:11,0,0	1/1:2,0:2:5.78:31,6,0	1/1:6,1:6:12.81:85,13,0	1/1:15,1:16:2.84:14,3,0	1/1:9,0:6:1.82:6,2,0	0/1:15,0:15:11.88:12,0,59	0/0:13,0:13:6.01:0,6,73	0/0:39,0:39:19.51:0,20,542	1/1:10,0:10:5.87:40,6,0	0/1:19,0:19:9.15:9,0,231	0/0:21,0:21:35.60:0,36,399	0/0:6,0:5:11.98:0,12,109
chr10	7383931	.	CGTGTGTGTGTGTGT	C	2129.77	PASS	AB=0.905;AC=19;AF=0.365;AN=52;BaseQRankSum=8.553;DP=437;FS=1.575;HRun=0;HaplotypeScore=213.7872;InbreedingCoeff=0.1937;MQ=40.48;MQ0=15;MQRankSum=-7.362;QD=13.15;ReadPosRankSum=6.323;VQSLOD=2.1567;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:69.22:0,69,3330	0/1:4,2:6:50.34:106,0,50	./.	./.	1/1:8,3:11:2.94:111,3,0	0/0:16,0:16:3.01:0,3,45	0/1:19,0:18:32.42:52,0,32	0/0:6,0:6:6.02:0,6,177	0/1:21,0:21:91.85:293,0,92	0/1:8,3:11:99:307,0,541	1/1:3,4:7:3.01:85,3,0	0/0:24,0:24:37.75:0,38,2343	0/0:17,0:17:33.58:0,34,1539	0/0:16,0:18:15.05:0,15,946	1/1:9,5:14:15.05:566,15,0	0/1:11,0:10:36.61:279,0,37	1/1:15,0:14:1.34:82,1,0	0/1:6,2:7:99:130,0,347	0/1:10,0:10:72.90:73,0,262	1/1:17,0:17:3.01:51,3,0	0/0:19,0:16:0.47:0,0,1	0/0:15,0:15:15.05:0,15,961	0/0:11,0:12:12.04:0,12,662	0/0:39,0:42:61.65:0,62,3747	1/1:12,0:12:5.57:156,6,0	0/0:17,0:17:33.07:0,33,1667	0/0:22,0:23:37.02:0,37,1962	0/0:6,0:6:12.04:0,12,565
chr10	7383958	.	G	GCA	3769.98	PASS	AB=0.619;AC=29;AF=0.518;AN=56;BaseQRankSum=11.567;DP=579;FS=5.864;HRun=0;HaplotypeScore=166.0986;InbreedingCoeff=0.7911;MQ=51.03;MQ0=14;MQRankSum=-11.138;QD=14.01;ReadPosRankSum=0.810;VQSLOD=3.4185;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:80.83:0,81,1231	1/1:2,5:7:5.99:82,6,0	0/0:35,0:17:33.91:0,34,614	0/0:32,0:21:63.21:0,63,990	1/1:4,16:21:2.96:20,3,0	1/1:15,3:18:9.03:119,9,0	1/1:7,22:29:2.75:38,3,0	1/1:3,19:22:51.27:778,51,0	1/1:18,4:22:22.07:220,22,0	1/1:4,14:18:45.12:726,45,0	1/1:6,8:14:3.01:35,3,0	0/0:21,0:21:46.38:0,46,699	0/0:20,0:20:44.97:0,45,680	0/0:17,0:17:24.06:0,24,357	1/1:6,16:23:14.89:107,15,0	1/1:6,9:17:17.99:179,18,0	1/1:4,10:15:4.54:55,5,0	1/1:4,7:11:24.08:416,24,0	0/1:10,15:25:2.27:805,0,2	1/1:10,1:11:9:85,9,0	0/0:9,17:24:4.66:0,5,20	0/0:13,0:13:24.06:0,24,347	0/0:12,0:12:24.05:0,24,324	0/0:48,0:48:79.62:0,80,1203	1/1:12,2:14:9.01:104,9,0	0/0:18,0:17:9.28:0,9,645	0/0:24,0:24:51.15:0,51,751	0/0:5,0:5:12.02:0,12,158
chr10	7384134	.	GC	G	11316.83	PASS	AB=0.926;AC=33;AF=0.589;AN=56;BaseQRankSum=11.559;DP=637;FS=5.461;HRun=2;HaplotypeScore=65.7816;InbreedingCoeff=0.9529;MQ=91.22;MQ0=0;MQRankSum=-4.881;QD=31.35;ReadPosRankSum=0.944;VQSLOD=4.3904;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,129,1860	1/1:0,12:12:36.12:467,36,0	0/0:25,0:25:58.98:0,59,923	0/0:29,0:29:78.03:0,78,1005	1/1:0,20:20:57.19:739,57,0	1/1:0,24:24:66.17:832,66,0	1/1:1,13:14:33.11:428,33,0	1/1:0,38:38:99:1412,114,0	1/1:0,27:27:75.12:910,75,0	1/1:0,17:17:51.12:642,51,0	1/1:0,18:18:48.16:622,48,0	0/0:17,0:17:48.10:0,48,674	0/0:19,0:19:51.02:0,51,686	0/0:26,0:26:72.22:0,72,1057	1/1:0,25:25:59.98:683,60,0	1/1:0,23:23:57.06:682,57,0	1/1:2,26:28:66.21:856,66,0	1/1:0,21:21:54.13:681,54,0	1/1:0,12:12:36.11:454,36,0	1/1:1,20:21:60.03:719,60,0	1/1:0,22:22:54.13:682,54,0	0/0:21,0:21:60.20:0,60,897	0/0:15,0:15:45.10:0,45,627	0/0:35,0:35:94.89:0,95,1496	1/1:0,14:14:39.13:506,39,0	0/1:23,2:25:2.50:2,0,939	0/0:24,0:23:69.02:0,69,996	0/0:22,0:22:66.22:0,66,984
chr10	7386912	.	T	TTTTTG	18231.60	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=-14.520;DP=541;FS=17.803;HRun=0;HaplotypeScore=85.8315;InbreedingCoeff=0.9913;MQ=73.00;MQ0=1;MQRankSum=-2.330;QD=58.43;ReadPosRankSum=2.008;VQSLOD=4.0813;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:87.30:0,87,1688	1/1:2,12:15:30.10:854,30,0	0/0:25,0:19:30.29:0,30,379	0/0:23,0:20:14.41:0,14,597	1/1:2,17:22:54.12:1510,54,0	1/1:4,15:20:39.13:1145,39,0	1/1:5,5:10:12.04:351,12,0	1/1:5,20:30:69.20:1700,69,0	1/1:5,7:12:21.07:612,21,0	1/1:5,14:22:42.14:1176,42,0	1/1:2,16:22:48.16:1352,48,0	0/0:18,0:18:51.17:0,51,962	0/0:10,0:10:30.09:0,30,545	0/0:22,0:22:60.18:0,60,1059	1/1:4,17:21:42.14:1232,42,0	1/1:5,13:20:39.13:1130,39,0	1/1:0,21:23:51.18:1483,51,0	1/1:1,12:15:27.09:793,27,0	1/1:4,18:25:61.07:1642,61,0	1/1:4,23:27:69.23:1908,69,0	1/1:0,8:11:21.07:617,21,0	0/0:15,0:15:39.13:0,39,752	0/0:20,0:20:57.18:0,57,1048	0/0:12,0:12:33.06:0,33,572	1/1:5,9:17:27.05:725,27,0	0/0:11,0:11:27.09:0,27,527	0/0:22,0:22:54.17:0,54,1011	0/0:19,0:19:57.18:0,57,1066
chr10	7387298	.	T	TGCTC	5868.47	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=13.259;DP=604;FS=11.120;HRun=0;HaplotypeScore=146.5701;InbreedingCoeff=0.9931;MQ=76.54;MQ0=2;MQRankSum=-13.518;QD=63.10;ReadPosRankSum=3.121;VQSLOD=6.7392;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,108,2262	0/0:14,0:14:36.12:0,36,753	0/0:25,0:23:60.20:0,60,1123	0/0:22,0:16:39.09:0,39,778	0/0:45,0:45:99:0,129,2648	1/1:2,17:18:51.18:1173,51,0	1/1:1,4:5:15.05:336,15,0	0/0:29,0:29:84.29:0,84,1753	1/1:0,16:16:48.16:1110,48,0	0/0:26,0:26:75.26:0,75,1573	0/0:19,0:19:54.19:0,54,1131	0/0:21,0:21:63.21:0,63,1284	0/0:21,0:21:63.22:0,63,1321	0/0:18,0:18:54.19:0,54,1109	0/0:24,0:24:72.25:0,72,1510	1/1:1,8:9:27.09:645,27,0	1/1:1,6:7:15.05:348,15,0	0/0:17,0:17:48.16:0,48,990	1/1:2,4:6:18.06:418,18,0	1/1:2,12:14:36.11:803,36,0	0/0:22,0:22:66.21:0,66,1345	0/0:25,0:25:75.26:0,75,1573	0/0:37,0:37:99:0,108,2233	0/0:32,0:32:96.28:0,96,1914	1/1:1,16:16:45.15:1037,45,0	0/0:31,0:31:90.28:0,90,1780	0/0:28,0:28:84.28:0,84,1709	0/0:18,0:18:54.14:0,54,1017
chr10	7387300	.	GA	G	760.59	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=14.237;DP=613;FS=5.694;HRun=1;HaplotypeScore=128.6948;InbreedingCoeff=0.9837;MQ=77.45;MQ0=4;MQRankSum=-13.684;QD=8.45;ReadPosRankSum=4.705;VQSLOD=1.3044;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,111,1725	0/0:14,0:14:42.12:0,42,640	0/0:31,0:25:65.31:0,65,923	0/0:24,0:16:42.11:0,42,653	0/0:45,0:45:99:0,132,2083	1/1:2,17:18:46.20:206,46,0	1/1:0,4:4:11.16:51,11,0	0/0:30,0:30:90.30:0,90,1419	1/1:1,16:17:44.57:204,45,0	0/0:26,0:26:78.26:0,78,1224	0/0:19,0:19:57.19:0,57,909	0/0:21,0:21:63.21:0,63,1007	0/0:22,0:22:66.20:0,66,1009	0/0:19,0:19:57.19:0,57,909	0/0:24,0:24:72.25:0,72,1149	1/1:1,8:9:22.49:106,22,0	1/1:0,6:6:13.66:60,14,0	0/0:17,0:17:51.17:0,51,813	1/1:1,4:5:11.64:65,12,0	1/1:2,12:14:27.07:117,27,0	0/0:23,0:23:69.22:0,69,1079	0/0:25,0:25:75.26:0,75,1198	0/0:37,0:37:99:0,111,1738	0/0:32,0:32:93.25:0,93,1433	1/1:1,15:16:35.25:156,35,0	0/0:27,0:27:81.27:0,81,1272	0/0:29,0:29:87.28:0,87,1360	0/0:20,0:20:60.11:0,60,818
chr10	7387302	.	G	GCT	1925.13	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=14.552;DP=625;FS=9.267;HRun=0;HaplotypeScore=138.3141;InbreedingCoeff=0.9866;MQ=76.05;MQ0=4;MQRankSum=-13.163;QD=20.48;ReadPosRankSum=4.188;VQSLOD=3.6497;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,111,1757	0/0:13,0:13:39.13:0,39,636	0/0:32,0:24:54.05:0,54,857	0/0:27,0:18:43.18:0,43,695	0/0:45,0:45:99:0,132,2114	1/1:1,17:17:51.02:458,51,0	1/1:1,4:5:12.01:110,12,0	0/0:30,0:30:87.30:0,87,1416	1/1:0,16:17:48.02:428,48,0	0/0:26,0:26:78.27:0,78,1260	0/0:20,0:20:60.19:0,60,948	0/0:21,0:21:63.22:0,63,1028	0/0:21,0:21:63.22:0,63,1026	0/0:19,0:19:57.19:0,57,928	0/0:24,0:24:72.24:0,72,1151	1/1:3,8:11:25.84:217,26,0	1/1:0,6:6:15.01:139,15,0	0/0:17,0:17:51.17:0,51,828	1/1:2,4:5:12.02:120,12,0	1/1:2,12:15:31.25:272,31,0	0/0:23,0:23:69.24:0,69,1123	0/0:25,0:25:75.26:0,75,1217	0/0:36,0:36:99:0,108,1737	0/0:32,0:32:87.30:0,87,1417	1/1:0,14:16:44.70:388,45,0	0/0:28,0:28:84.27:0,84,1312	0/0:31,0:31:90.29:0,90,1435	0/0:21,0:21:57.19:0,57,914
chr10	7387305	.	G	GCCTC	6724.67	PASS	AB=0.714;AC=15;AF=0.268;AN=56;BaseQRankSum=14.702;DP=637;FS=3.135;HRun=0;HaplotypeScore=146.3874;InbreedingCoeff=0.9290;MQ=76.04;MQ0=6;MQRankSum=-13.698;QD=67.93;ReadPosRankSum=3.300;VQSLOD=6.7245;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,111,2242	0/0:13,0:13:39.13:0,39,818	0/0:36,0:25:67.46:0,67,1246	0/0:30,0:18:43.40:0,43,806	0/0:45,0:45:99:0,132,2656	1/1:0,17:17:51.18:1371,51,0	1/1:1,4:5:12.04:323,12,0	0/0:31,0:31:93.28:0,93,1830	1/1:2,16:18:54.17:1395,54,0	0/0:26,0:26:78.26:0,78,1600	0/0:20,0:20:59.99:0,60,1207	0/0:21,0:21:63.22:0,63,1321	0/0:21,0:21:63.22:0,63,1321	0/0:20,0:20:60.21:0,60,1244	0/0:23,0:23:69.22:0,69,1408	1/1:2,8:10:30.10:770,30,0	1/1:1,6:7:18.03:415,18,0	0/0:17,0:17:48.16:0,48,999	0/1:6,4:5:3.92:298,0,4	1/1:3,12:15:36.12:932,36,0	0/0:23,0:23:69.24:0,69,1447	0/0:26,0:26:75.25:0,75,1535	0/0:36,0:36:99:0,105,2201	0/0:30,0:30:87.30:0,87,1811	1/1:3,14:17:48.16:1221,48,0	0/0:28,0:28:84.27:0,84,1656	0/0:31,0:31:93.32:0,93,1948	0/0:21,0:21:63.22:0,63,1320
chr10	7389461	.	T	TGTAGTGTGAGAAATGCTCGGCG	34111.26	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-5.204;DP=739;FS=2.326;HRun=0;HaplotypeScore=413.8519;InbreedingCoeff=0.9981;MQ=79.87;MQ0=0;MQRankSum=-16.060;QD=159.40;ReadPosRankSum=-4.112;VQSLOD=3.1383;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,126,6797	1/1:12,3:17:39.13:3395,39,0	0/0:26,0:26:54.16:0,54,2106	0/0:21,0:21:51.94:0,52,1914	1/1:26,3:32:63.22:3057,63,0	0/0:19,0:18:54.16:0,54,2841	0/0:19,0:19:57.20:0,57,2513	1/1:41,0:40:96.33:6593,96,0	0/0:40,0:40:99:0,105,5493	1/1:23,6:39:99:7930,114,0	1/1:12,5:19:39.13:2561,39,0	0/0:32,0:32:93.32:0,93,4938	0/0:19,0:19:51.15:0,51,2710	0/0:33,0:33:87.30:0,87,4350	1/1:22,11:35:90.31:7397,90,0	0/0:19,0:19:57.18:0,57,3259	0/0:36,0:36:99:0,99,5393	1/1:10,2:13:27.09:2061,27,0	0/0:18,0:18:51.18:0,51,2115	0/0:36,0:36:99:0,105,5591	1/1:14,1:18:18.06:1118,18,0	0/0:25,0:25:72.23:0,72,3709	0/0:28,0:28:81.28:0,81,4593	0/0:27,0:27:78.27:0,78,4155	0/0:22,0:22:63.20:0,63,2838	0/0:22,0:22:63.22:0,63,3200	0/0:25,0:24:72.21:0,72,3799	0/0:10,0:10:24.08:0,24,1443
chr10	7390307	.	GCACA	G	422.39	PASS	AB=0.900;AC=17;AF=0.425;AN=40;BaseQRankSum=-0.068;DP=537;FS=6.403;HRun=0;HaplotypeScore=143.8719;InbreedingCoeff=0.3606;MQ=60.41;MQ0=16;MQRankSum=-0.358;QD=1.70;ReadPosRankSum=0.068;VQSLOD=2.2536;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:33,0:33:6.01:72,6,0	0/0:4,0:4:0:0,0,0	./.	0/0:23,0:13:0.47:0,0,1	./.	./.	0/1:28,0:26:0.33:0,0,0	1/1:16,0:14:2.22:7,2,0	./.	0/0:26,0:26:0:0,0,0	1/1:13,0:13:0.47:1,0,0	0/1:21,2:31:42.22:42,0,215	0/0:12,0:13:8.59:0,9,50	1/1:8,10:19:12.04:185,12,0	./.	1/1:8,0:7:3.01:30,3,0	0/0:26,0:26:2.98:0,3,21	1/1:11,0:15:6.01:56,6,0	./.	./.	./.	0/0:10,1:14:0:0,0,0	0/1:13,1:14:0:0,0,0	0/1:37,2:45:99:141,0,108	0/1:20,0:20:0:0,0,0	0/0:14,0:14:13.86:0,14,216	0/0:15,0:18:15:0,15,268	0/0:7,0:7:14.79:0,15,258
chr10	7390355	.	A	ACGCGCGCGCGCGCGCG	1154.81	PASS	AB=0.828;AC=2;AF=0.038;AN=52;BaseQRankSum=3.040;DP=712;FS=7.372;HRun=0;HaplotypeScore=239.5548;InbreedingCoeff=0.2527;MQ=42.12;MQ0=31;MQRankSum=-3.998;QD=34.99;ReadPosRankSum=-3.177;VQSLOD=1.5713;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:37:84.72:0,85,3505	0/0:11,0:11:14.92:0,15,552	0/0:77,0:13:36.05:0,36,1108	0/0:75,0:12:29.31:0,29,998	0/0:15,0:15:18.06:0,18,822	0/0:13,0:14:0.39:0,0,1	0/0:22,0:21:5.72:0,6,111	0/0:17,0:16:45.12:0,45,1817	./.	0/0:36,0:36:99:0,99,3567	0/0:13,0:13:15.05:0,15,706	0/0:33,0:33:70.17:0,70,2741	0/0:9,0:8:21.53:0,22,823	0/0:34,0:33:48.13:0,48,1848	0/0:18,0:18:15.19:0,15,707	./.	0/1:9,10:21:50.22:967,0,50	0/0:19,0:19:39.09:0,39,1536	0/1:12,0:12:99:275,0,349	0/0:20,0:19:1.25:0,1,3	0/0:62,0:60:81.76:0,82,3472	0/0:20,0:20:31.57:0,32,1377	0/0:8,0:9:15.04:0,15,585	0/0:48,0:50:78.12:0,78,3241	0/0:34,0:34:1.15:0,1,2	0/0:25,0:24:46.87:0,47,2382	0/0:10,0:9:21.05:0,21,705	0/0:10,0:10:30.10:0,30,1155
chr10	7390380	.	GCA	G	174.27	PASS	AB=0.989;AC=8;AF=0.143;AN=56;BaseQRankSum=5.606;DP=754;FS=28.254;HRun=0;HaplotypeScore=152.6026;InbreedingCoeff=0.1911;MQ=41.15;MQ0=29;MQRankSum=-6.525;QD=1.27;ReadPosRankSum=-2.545;VQSLOD=0.4316;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:87.30:0,87,1478	0/1:11,0:11:3.44:3,0,111	0/0:64,0:7:2.96:0,3,51	0/0:68,0:8:12.04:0,12,205	0/0:17,1:18:9.03:0,9,154	0/1:18,0:18:0.01:0,0,0	0/1:24,0:23:0.08:0,0,0	0/1:22,0:22:76.27:76,0,369	0/0:7,0:7:2.68:0,3,11	0/1:40,3:43:99:181,0,1229	0/0:17,0:16:15.05:0,15,257	0/0:39,0:38:72.11:0,72,1189	0/0:10,0:9:6.26:0,6,342	0/0:30,0:29:48.16:0,48,807	0/0:18,0:18:7.44:0,7,247	1/1:6,0:6:2.37:8,2,0	0/0:25,0:25:23.74:0,24,342	0/0:16,0:16:25.44:0,25,413	0/1:13,0:12:7.06:7,0,288	0/0:20,0:20:3.01:0,3,51	0/0:68,1:66:71.47:0,71,1161	0/0:27,0:27:56.86:0,57,922	0/0:13,0:13:21.07:0,21,352	0/0:43,0:41:60.21:0,60,1021	0/0:45,0:44:0.47:0,0,1	0/0:20,0:19:48.15:0,48,769	0/0:12,0:11:30.10:0,30,503	0/0:12,0:12:36.12:0,36,590
chr10	7390388	.	A	ATG	141.01	PASS	AB=0.907;AC=6;AF=0.107;AN=56;BaseQRankSum=5.314;DP=743;FS=13.820;HRun=0;HaplotypeScore=156.5764;InbreedingCoeff=0.1790;MQ=39.89;MQ0=23;MQRankSum=-6.425;QD=0.87;ReadPosRankSum=-2.894;VQSLOD=1.1857;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:90.31:0,90,1460	0/1:9,4:13:3.51:4,0,100	0/0:57,0:3:5.85:0,6,62	0/0:69,0:8:15.52:0,16,240	0/0:15,4:19:9.03:0,9,141	0/1:19,0:19:0.03:0,0,0	0/1:22,0:21:0.15:0,0,1	0/1:14,4:18:91.25:91,0,339	0/0:8,0:8:2.75:0,3,14	0/1:35,7:42:99:136,0,1116	0/0:14,3:16:15.05:0,15,235	0/0:38,0:37:72.19:0,72,1142	0/0:11,0:10:20.26:0,20,341	0/0:26,0:25:48.16:0,48,778	0/0:15,4:19:17.73:0,18,246	0/0:7,0:7:2.74:0,3,12	0/0:25,0:25:21.10:0,21,311	0/0:12,2:14:30.10:0,30,457	0/0:14,0:14:22.60:0,23,310	0/0:20,0:20:3.01:0,3,48	0/0:67,1:64:70.86:0,71,1054	0/0:25,0:25:56.87:0,57,930	0/0:12,0:12:21.07:0,21,343	0/0:41,0:39:59.97:0,60,978	0/1:48,0:47:0.03:0,0,0	0/0:20,0:19:51.16:0,51,796	0/0:15,0:14:33.11:0,33,521	0/0:12,0:12:36.12:0,36,587
chr10	7390390	.	ATG	A	117.88	PASS	AB=0.865;AC=13;AF=0.232;AN=56;BaseQRankSum=6.953;DP=722;FS=61.636;HRun=0;HaplotypeScore=150.8244;InbreedingCoeff=0.1318;MQ=40.17;MQ0=21;MQRankSum=-7.463;QD=0.67;ReadPosRankSum=-2.515;VQSLOD=-0.0234;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:96.33:0,96,1858	0/0:9,4:13:0.94:0,1,71	0/0:53,1:3:5.89:0,6,73	0/0:58,6:9:15.42:0,15,224	0/0:16,4:20:9.02:0,9,101	1/1:17,2:19:0.47:1,0,0	0/1:13,6:18:0.02:0,0,0	0/1:13,4:17:47.89:48,0,251	1/1:6,1:7:2.95:19,3,0	0/1:35,7:42:32.27:32,0,808	0/0:14,3:16:15.04:0,15,191	0/0:36,0:35:65.96:0,66,1243	0/1:11,0:10:18.52:19,0,397	0/0:24,0:23:45.15:0,45,912	0/0:15,4:19:7.39:0,7,157	1/1:5,2:7:3:26,3,0	0/1:22,3:25:20.57:21,0,178	0/1:9,4:14:52.19:52,0,245	0/1:14,0:14:33.92:34,0,221	0/0:18,1:19:3.01:0,3,35	0/0:64,1:61:43.77:0,44,744	0/0:26,0:26:60.12:0,60,1158	0/0:11,0:11:21.07:0,21,416	0/0:40,0:38:60.18:0,60,1203	0/0:46,2:47:0.47:0,0,1	0/0:19,0:18:54.14:0,54,895	0/0:15,0:15:39.13:0,39,725	0/0:12,0:12:36.12:0,36,726
chr10	7390392	.	G	GCA	4966.71	PASS	AB=0.812;AC=32;AF=0.571;AN=56;BaseQRankSum=-0.638;DP=725;FS=0.000;HRun=0;HaplotypeScore=145.7478;InbreedingCoeff=0.6747;MQ=39.61;MQ0=21;MQRankSum=-7.715;QD=12.77;ReadPosRankSum=-1.910;VQSLOD=4.3375;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:84.25:0,84,1085	1/1:4,9:13:8.34:113,8,0	0/0:54,0:3:3.01:0,3,37	0/0:65,0:9:8.87:0,9,65	1/1:9,11:20:9.03:145,9,0	1/1:6,14:20:2.98:21,3,0	0/1:13,7:20:0.15:0,0,0	1/1:7,10:17:39.13:619,39,0	1/1:4,3:7:3:26,3,0	1/1:20,24:44:99:1663,105,0	1/1:8,8:15:6.02:103,6,0	0/0:33,0:32:57.17:0,57,733	0/0:11,0:10:0.26:0,0,253	0/0:23,0:22:45.13:0,45,576	1/1:6,14:20:14.93:252,15,0	1/1:6,1:7:2.92:17,3,0	1/1:15,10:26:14.72:335,15,0	1/1:7,5:12:12.04:206,12,0	1/1:6,9:15:26.97:417,27,0	1/1:13,7:20:3.01:47,3,0	1/1:13,51:60:56.87:942,57,0	0/0:26,0:26:57.09:0,57,725	0/0:11,0:11:18.06:0,18,237	0/0:41,0:39:43.48:0,43,621	1/1:26,20:48:0.10:0,0,0	0/1:16,2:17:60.68:61,0,430	0/0:15,0:15:39.13:0,39,505	0/0:12,0:12:36.07:0,36,426
chr10	7390401	.	T	TAC	573.38	PASS	AB=0.983;AC=22;AF=0.393;AN=56;BaseQRankSum=6.441;DP=659;FS=12.722;HRun=0;HaplotypeScore=144.8322;InbreedingCoeff=0.4685;MQ=38.70;MQ0=21;MQRankSum=-6.616;QD=2.19;ReadPosRankSum=-1.439;VQSLOD=1.7358;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:87.26:0,87,1360	1/1:13,0:13:1.08:4,1,0	0/0:57,0:1:3.01:0,3,49	0/0:66,0:7:14.63:0,15,160	0/0:18,0:18:1.25:0,1,45	0/0:18,1:19:2.98:0,3,29	0/0:18,1:19:0.33:0,0,1	0/1:17,0:17:56.42:56,0,88	1/1:4,3:7:3.01:61,3,0	0/1:40,0:40:99:196,0,118	1/1:12,0:12:3.31:16,3,0	0/0:28,0:28:57.02:0,57,918	0/1:14,0:14:17.38:17,0,311	0/0:21,0:20:42.14:0,42,685	1/1:20,0:20:4.36:16,4,0	1/1:3,3:6:3.01:49,3,0	1/1:20,1:21:13.82:136,14,0	1/1:7,0:7:10.51:45,11,0	1/1:11,2:13:4.57:80,5,0	0/0:16,0:16:0.89:0,1,2	1/1:49,0:45:17.71:64,18,0	0/0:24,0:24:54.16:0,54,855	0/0:10,0:10:18.06:0,18,294	0/0:34,0:33:43.51:0,44,754	0/1:39,3:41:0.07:0,0,0	0/0:16,0:15:29.18:0,29,578	0/0:17,0:17:42.09:0,42,636	0/0:10,0:10:30.10:0,30,477
chr10	7390419	.	CACACACGT	C	320.83	PASS	AB=1.000;AC=11;AF=0.212;AN=52;BaseQRankSum=5.327;DP=614;FS=2.714;HRun=0;HaplotypeScore=162.7617;InbreedingCoeff=0.2475;MQ=35.31;MQ0=20;MQRankSum=-4.587;QD=2.51;ReadPosRankSum=0.022;VQSLOD=2.1709;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:69.10:0,69,2635	1/1:14,0:14:1.18:3,1,0	0/0:54,0:4:6.02:0,6,180	0/0:69,0:7:12.04:0,12,221	1/1:14,0:14:3.01:45,3,0	0/0:20,2:22:0.45:0,0,1	0/0:19,0:19:0:0,0,1	0/1:9,0:10:7.38:7,0,71	1/1:8,0:8:1.33:4,1,0	0/1:34,0:34:41.59:323,0,42	./.	0/0:32,0:31:43.87:0,44,1150	0/0:15,0:14:14.76:0,15,390	0/0:16,0:15:33.10:0,33,874	0/0:15,0:15:1.25:0,1,3	0/0:10,0:10:6.43:0,6,77	0/0:17,1:18:0.02:0,0,153	0/1:7,0:7:20.29:20,0,86	0/1:12,0:10:30.79:31,0,139	./.	0/1:29,0:28:0.01:0,0,0	0/0:20,0:20:39.10:0,39,1001	0/0:9,0:9:15.05:0,15,467	0/0:32,0:31:24.49:0,24,671	0/0:47,1:48:0.77:0,1,2	0/0:16,0:15:36.08:0,36,819	0/0:14,0:14:29.87:0,30,829	0/0:9,0:9:27.09:0,27,745
chr10	7390421	.	CACACGT	C	741.76	PASS	AB=1.000;AC=13;AF=0.250;AN=52;BaseQRankSum=4.527;DP=605;FS=0.759;HRun=0;HaplotypeScore=148.6466;InbreedingCoeff=0.1691;MQ=35.33;MQ0=20;MQRankSum=-4.885;QD=3.86;ReadPosRankSum=0.179;VQSLOD=1.9460;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:72.13:0,72,2322	1/1:12,0:12:1.18:3,1,0	0/1:55,0:5:10.55:11,0,148	0/0:68,0:7:11.53:0,12,190	1/1:14,0:14:3.01:45,3,0	0/0:20,2:22:0.45:0,0,1	0/0:18,0:18:0:0,0,0	0/1:9,0:9:37.80:40,0,38	1/1:8,0:8:2.61:44,3,0	0/1:32,0:32:28.08:544,0,28	./.	0/0:31,0:30:52.17:0,52,1084	0/0:15,0:14:13.50:0,13,327	0/0:16,0:15:33.10:0,33,742	0/0:15,0:15:1.25:0,1,3	0/0:10,0:10:1.39:0,1,8	0/1:17,0:17:73.46:73,0,93	0/1:7,0:7:88.18:90,0,88	0/1:10,0:8:19.56:20,0,58	./.	0/1:28,0:27:0.01:0,0,0	0/0:20,0:20:39.12:0,39,845	0/0:9,0:9:15.05:0,15,368	0/0:32,0:31:24.49:0,24,541	0/0:43,5:48:0.37:0,0,1	0/0:17,0:16:39.04:0,39,771	0/0:14,0:14:29.95:0,30,684	0/0:9,0:9:27.09:0,27,676
chr10	7390424	.	A	ACACACG	1732.71	PASS	AB=0.986;AC=22;AF=0.423;AN=52;BaseQRankSum=7.345;DP=594;FS=0.000;HRun=0;HaplotypeScore=156.2153;InbreedingCoeff=0.4544;MQ=34.84;MQ0=20;MQRankSum=-6.833;QD=7.47;ReadPosRankSum=-3.588;VQSLOD=1.7842;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:72.19:0,72,1614	0/0:10,0:10:0:0,0,0	0/0:57,0:5:8.68:0,9,122	0/0:67,0:9:11.95:0,12,232	1/1:12,0:12:3.01:45,3,0	1/1:21,1:22:0.37:1,0,0	1/1:18,0:18:2.91:53,3,0	0/1:9,0:9:99:125,0,114	1/1:8,0:8:6.32:150,6,0	1/1:31,0:31:21.05:673,21,0	./.	0/0:31,0:30:37.04:0,37,773	0/0:15,0:14:6.69:0,7,184	0/0:15,0:14:33.11:0,33,673	0/0:12,0:12:1.25:0,1,4	1/1:10,0:10:6.49:126,6,0	0/1:16,1:17:7.88:270,0,8	1/1:7,0:7:6.54:110,7,0	0/1:10,0:8:4.62:321,0,5	./.	1/1:23,0:22:0.89:2,1,0	0/0:20,0:20:39.13:0,39,792	0/0:9,0:9:15.05:0,15,270	0/0:31,0:30:20.37:0,20,416	1/1:48,2:50:0.55:2,1,0	0/1:15,0:14:7.08:7,0,536	0/0:14,0:14:30.08:0,30,478	0/0:9,0:9:19.65:0,20,379
chr10	7390425	.	C	CACGCAT	2700.36	PASS	AB=0.702;AC=22;AF=0.423;AN=52;BaseQRankSum=5.291;DP=538;FS=10.293;HRun=0;HaplotypeScore=128.0144;InbreedingCoeff=0.5700;MQ=35.14;MQ0=21;MQRankSum=-6.657;QD=15.34;ReadPosRankSum=-1.237;VQSLOD=2.3396;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:39:75.22:0,75,1758	0/1:4,3:9:0.04:0,0,0	0/0:54,0:6:8.61:0,9,136	0/0:66,0:10:14.52:0,15,268	1/1:1,6:10:3.01:45,3,0	1/1:9,5:16:0.41:1,0,0	0/1:2,10:13:0:0,0,0	0/1:3,1:5:58.36:101,0,58	1/1:3,5:8:3.31:113,3,0	1/1:6,7:24:60.17:1428,60,0	./.	0/0:30,0:29:47.84:0,48,962	0/0:14,0:14:11.26:0,11,227	0/0:15,0:14:33.11:0,33,775	0/0:2,4:11:1.25:0,1,3	1/1:3,6:9:6.42:226,6,0	1/1:4,11:15:12.37:510,12,0	1/1:0,1:5:11.87:173,12,0	0/1:4,2:5:23.61:256,0,24	./.	1/1:11,0:15:0.89:2,1,0	0/0:20,0:20:39.13:0,39,942	0/0:9,0:9:15.05:0,15,343	0/0:31,0:30:20.26:0,20,503	1/1:18,19:40:0.71:2,1,0	0/0:14,0:13:39.05:0,39,727	0/0:13,0:13:30.10:0,30,632	0/0:9,0:9:27.03:0,27,510
chr10	7390426	.	GTA	G	271.37	PASS	AB=0.944;AC=11;AF=0.220;AN=50;BaseQRankSum=3.355;DP=537;FS=1.811;HRun=0;HaplotypeScore=120.1657;InbreedingCoeff=0.1781;MQ=35.05;MQ0=21;MQRankSum=-3.404;QD=1.82;ReadPosRankSum=-0.714;VQSLOD=2.3894;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:78.24:0,78,1503	0/1:8,0:9:0.11:0,0,0	0/1:57,2:5:18.97:19,0,106	0/0:69,2:10:17.25:0,17,137	1/1:10,0:10:2.98:21,3,0	0/1:16,0:16:0:0,0,0	./.	0/1:3,2:5:41.89:83,0,42	0/0:8,0:8:3.21:0,3,12	0/1:22,2:24:82:236,0,82	./.	0/0:29,0:29:46.93:0,47,507	0/0:15,0:14:12.16:0,12,150	0/0:15,0:14:24.91:0,25,311	0/0:10,0:11:1.25:0,1,3	0/0:9,0:9:6.02:0,6,73	0/0:15,0:15:20.63:0,21,172	0/1:5,0:5:15.06:15,0,48	0/1:6,0:4:12.83:13,0,68	./.	1/1:13,1:15:1.07:3,1,0	0/0:19,0:19:39.04:0,39,410	0/0:9,0:9:15.03:0,15,169	0/0:32,0:31:22.83:0,23,238	0/0:40,0:40:0.94:0,1,2	0/0:14,0:13:35.05:0,35,377	0/0:13,0:13:30.02:0,30,340	0/0:9,0:9:27.07:0,27,313
chr10	7390427	.	T	TAC	3850.13	PASS	AB=0.877;AC=26;AF=0.565;AN=46;BaseQRankSum=-3.306;DP=545;FS=2.232;HRun=0;HaplotypeScore=113.9332;InbreedingCoeff=0.5980;MQ=35.12;MQ0=21;MQRankSum=1.712;QD=14.10;ReadPosRankSum=0.348;VQSLOD=3.3034;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:72.20:0,72,905	1/1:9,0:9:0.97:3,1,0	0/0:59,0:6:8.95:0,9,79	0/0:71,0:10:8.38:0,8,45	./.	1/1:15,0:16:1.36:3,1,0	./.	0/0:5,0:5:5.54:0,6,27	0/0:8,0:8:2.73:0,3,15	0/1:20,1:23:18.34:70,0,18	./.	1/1:10,23:32:41.02:677,41,0	1/1:7,10:16:20.23:182,20,0	1/1:7,7:13:18.06:284,18,0	./.	0/0:9,0:9:5.53:0,6,35	0/0:14,0:15:4.37:0,4,97	0/1:3,2:5:0.44:79,0,0	0/0:6,0:4:4.08:0,4,31	./.	0/1:13,2:15:0:0,0,0	1/1:8,12:20:33.07:478,33,0	1/1:2,8:10:12.04:202,12,0	1/1:13,20:32:27.05:375,27,0	0/1:39,0:41:0.02:0,0,0	1/1:7,7:13:39.12:587,39,0	1/1:1,12:13:27.09:455,27,0	1/1:1,9:10:27.09:454,27,0
chr10	7390434	.	A	ACGCACATG	665.32	PASS	AB=0.976;AC=12;AF=0.240;AN=50;BaseQRankSum=5.430;DP=553;FS=4.508;HRun=0;HaplotypeScore=154.6383;InbreedingCoeff=0.2973;MQ=34.87;MQ0=19;MQRankSum=-5.178;QD=5.04;ReadPosRankSum=-0.807;VQSLOD=2.5619;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:75.26:0,75,2054	0/1:8,1:9:9.96:10,0,43	0/0:61,0:7:9.44:0,9,242	0/0:76,0:12:15.05:0,15,237	./.	1/1:16,0:16:0.69:2,1,0	0/1:13,0:13:0:0,0,0	0/1:6,0:6:62.32:159,0,62	0/0:8,0:8:2.15:0,2,45	0/1:22,1:23:99:561,0,155	./.	0/0:35,0:34:46.41:0,46,511	0/0:16,0:16:12.92:0,13,171	0/0:12,0:11:24.03:0,24,305	0/0:7,2:9:0:0,0,1	0/0:10,0:10:5.08:0,5,101	0/0:15,0:15:21.13:0,21,331	1/1:5,0:5:9.41:41,9,0	0/1:9,0:7:4.25:4,0,169	./.	0/1:12,0:12:0:0,0,0	0/0:20,0:20:30.46:0,30,435	0/0:9,0:9:12.04:0,12,173	0/0:33,0:32:29.02:0,29,414	1/1:39,0:39:1.09:3,1,0	0/0:16,0:15:35.19:0,35,502	0/0:13,0:13:30.10:0,30,404	0/0:12,0:12:35.98:0,36,459
chr10	7390438	.	G	GCA	431.41	PASS	AB=1.000;AC=17;AF=0.354;AN=48;BaseQRankSum=0.068;DP=556;FS=20.102;HRun=0;HaplotypeScore=124.6679;InbreedingCoeff=0.0391;MQ=35.11;MQ0=22;MQRankSum=0.486;QD=1.74;ReadPosRankSum=2.668;VQSLOD=1.1136;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:69.10:0,69,824	0/0:9,0:9:5.91:0,6,56	0/0:59,0:8:8.88:0,9,120	0/0:79,0:10:11.79:0,12,125	./.	1/1:16,0:16:0.47:1,0,0	./.	0/0:4,0:4:12.02:0,12,133	0/1:8,0:8:0.01:0,0,0	0/0:20,0:20:21.43:0,21,171	./.	0/1:36,0:35:43.51:94,0,44	0/1:17,0:16:38.31:38,0,39	0/1:13,0:12:16.17:16,0,36	0/1:9,0:9:0:0,0,0	0/0:10,0:10:5.69:0,6,75	0/0:15,0:15:9.69:0,10,92	1/1:2,2:4:6.02:99,6,0	0/0:9,0:7:14.83:0,15,153	./.	0/0:11,2:14:0:0,0,0	0/1:22,0:22:13.36:13,0,57	1/1:8,0:8:6.77:19,7,0	0/1:34,0:33:17.08:17,0,95	0/1:38,0:38:0.13:0,0,0	0/1:17,0:16:68.31:104,0,68	0/1:14,0:14:28.90:93,0,29	0/1:12,0:12:10.21:69,0,10
chr10	7390448	.	ATG	A	221.84	PASS	AB=0.943;AC=11;AF=0.229;AN=48;BaseQRankSum=2.082;DP=544;FS=1.680;HRun=0;HaplotypeScore=119.8337;InbreedingCoeff=-0.0835;MQ=36.70;MQ0=23;MQRankSum=-2.163;QD=1.14;ReadPosRankSum=-1.349;VQSLOD=2.1488;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:38.14:0,38,837	0/1:9,0:9:2.69:34,0,3	0/1:59,3:10:19.15:19,0,254	0/0:74,2:9:10.88:0,11,249	./.	0/0:9,3:12:1.71:0,2,6	./.	0/1:4,0:4:31.18:31,0,66	0/1:7,1:8:0.15:0,0,0	0/1:15,0:15:57.43:109,0,57	./.	0/0:37,1:37:15.29:0,15,425	0/1:16,0:15:18.37:18,0,183	0/1:13,0:12:1.08:1,0,231	0/1:7,0:7:0:0,0,0	0/0:8,2:10:6.01:0,6,63	0/1:5,10:15:43.77:66,0,44	0/0:3,0:3:4.07:0,4,12	0/0:7,0:6:9.51:0,10,118	./.	0/0:11,4:13:0:0,0,0	0/0:19,0:19:30.47:0,30,357	0/1:8,0:8:29.63:30,0,151	0/1:34,1:34:33.43:33,0,285	0/0:30,6:36:3.46:0,3,14	0/0:16,1:16:16.02:0,16,322	0/0:14,0:14:10.77:0,11,332	0/0:12,0:12:31.45:0,31,279
chr10	7390450	.	G	GCA	2915.66	PASS	AB=1.000;AC=31;AF=0.705;AN=44;BaseQRankSum=-3.251;DP=548;FS=0.000;HRun=0;HaplotypeScore=108.8208;InbreedingCoeff=0.4640;MQ=37.05;MQ0=24;MQRankSum=3.823;QD=9.05;ReadPosRankSum=1.116;VQSLOD=3.3526;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,35:46:31.70:1045,32,0	0/0:9,0:9:5.26:0,5,22	0/0:68,0:9:14.73:0,15,180	0/0:75,0:8:17.99:0,18,197	./.	1/1:10,0:11:2.69:8,3,0	./.	0/0:4,0:4:5.42:0,5,22	0/1:7,0:8:0:0,0,0	0/1:15,0:15:29.75:30,0,35	./.	1/1:15,3:39:28.19:286,28,0	1/1:2,0:15:21.19:110,21,0	1/1:10,0:13:9:78,9,0	0/1:7,0:7:0:0,0,0	1/1:9,0:10:0.42:1,0,0	0/1:14,0:15:2.16:15,0,2	1/1:3,0:3:2.97:20,3,0	./.	./.	./.	1/1:7,2:19:0.52:181,1,0	1/1:8,0:9:8.96:69,9,0	1/1:15,0:35:0.96:96,1,0	0/1:34,0:36:0.14:0,0,0	1/1:3,12:15:39.09:613,39,0	1/1:6,8:14:15.05:247,15,0	1/1:0,9:9:15:247,15,0
chr10	7390458	.	A	ACG	1141.62	PASS	AB=0.967;AC=22;AF=0.440;AN=50;BaseQRankSum=2.121;DP=552;FS=2.972;HRun=0;HaplotypeScore=119.9239;InbreedingCoeff=-0.0526;MQ=37.66;MQ0=22;MQRankSum=-0.250;QD=3.81;ReadPosRankSum=6.830;VQSLOD=2.1885;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:49,0:49:96.77:463,0,97	0/1:8,0:8:0.23:0,0,14	0/0:68,0:10:14.73:0,15,201	0/0:75,0:9:17.40:0,17,235	./.	0/0:7,2:9:2.12:0,2,10	0/0:6,0:6:0:0,0,0	1/1:2,0:2:4.87:17,5,0	0/1:5,2:7:0.15:0,0,0	0/1:16,0:16:53.84:54,0,84	./.	0/1:40,0:39:42.97:43,0,109	0/1:17,0:17:24.93:25,0,69	0/0:17,0:17:7.64:0,8,70	0/1:9,0:9:0:0,0,0	1/1:6,3:9:0.42:1,0,0	0/1:13,0:13:1.01:50,0,1	0/0:2,0:2:4.21:0,4,23	0/1:6,0:6:8.03:8,0,13	./.	1/1:16,0:14:0.89:2,1,0	0/1:21,0:21:57.82:58,0,129	0/1:10,0:10:1.64:2,0,20	0/0:36,0:35:3.50:0,3,90	0/1:23,9:34:0.04:0,0,1	0/1:18,0:18:77.67:285,0,78	0/1:16,0:16:61.82:114,0,62	1/1:9,0:9:15.02:145,15,0
chr10	7390462	.	ACG	A	435.50	PASS	AB=0.970;AC=16;AF=0.364;AN=44;BaseQRankSum=5.351;DP=484;FS=0.784;HRun=0;HaplotypeScore=106.1599;InbreedingCoeff=0.3966;MQ=38.62;MQ0=21;MQRankSum=-2.420;QD=3.85;ReadPosRankSum=-1.235;VQSLOD=2.4942;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:98.77:0,99,994	1/1:4,4:8:5.93:85,6,0	0/0:62,0:8:16.85:0,17,248	0/0:74,0:10:20.43:0,20,307	./.	1/1:3,0:5:0.89:2,1,0	./.	1/1:0,2:2:6.02:85,6,0	0/1:5,0:5:0.10:0,0,0	1/1:10,5:15:34.77:325,35,0	./.	0/0:39,0:38:3.47:0,3,341	0/0:17,0:17:18.82:0,19,185	0/0:17,0:17:21.69:0,22,187	0/1:7,2:9:0:0,0,0	0/0:5,0:6:0:0,0,0	0/1:2,0:2:5.84:13,0,6	1/1:1,1:2:2.97:20,3,0	./.	./.	./.	0/1:21,0:21:20.67:21,0,168	0/1:10,0:10:12.03:12,0,63	0/1:34,0:33:4.11:4,0,131	0/0:18,0:19:0.23:0,0,1	0/0:20,0:20:38.21:0,38,479	0/0:14,0:14:25.76:0,26,232	0/0:9,0:9:15.02:0,15,141
chr10	7390468	.	G	GCGCGCACACA	462.13	PASS	AB=1.000;AC=23;AF=0.479;AN=48;BaseQRankSum=6.536;DP=494;FS=7.196;HRun=0;HaplotypeScore=143.1172;InbreedingCoeff=0.6278;MQ=38.48;MQ0=24;MQRankSum=-4.976;QD=5.78;ReadPosRankSum=-3.211;VQSLOD=1.0126;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,99,2744	0/1:10,0:10:7.09:20,0,7	0/0:62,0:8:10.09:0,10,379	0/0:77,0:11:17.88:0,18,410	./.	1/1:3,2:5:3.31:15,3,0	1/1:2,0:2:2.92:18,3,0	1/1:5,0:5:9.04:66,9,0	1/1:3,2:5:0.22:1,0,0	1/1:15,0:15:29.31:211,29,0	./.	0/0:37,0:37:54.04:0,54,652	0/0:17,0:17:22.62:0,23,330	0/0:20,0:20:26.53:0,27,534	1/1:7,0:7:0.10:0,0,0	1/1:3,3:6:0.31:1,0,0	1/1:3,0:3:5.95:85,6,0	1/1:2,0:2:3.01:43,3,0	1/1:2,0:2:6.02:152,6,0	./.	./.	0/0:19,0:19:30.04:0,30,564	0/0:12,0:12:11.83:0,12,172	0/0:30,0:30:2.97:0,3,298	1/1:9,8:18:0.22:0,0,0	0/0:22,0:22:61.66:0,62,1524	0/0:15,0:15:24.08:0,24,655	0/0:10,0:9:16.30:0,16,421
chr10	7390488	.	G	GCA	860.81	PASS	AB=0.961;AC=16;AF=0.333;AN=48;BaseQRankSum=6.951;DP=552;FS=1.635;HRun=0;HaplotypeScore=115.4154;InbreedingCoeff=0.5960;MQ=38.55;MQ0=25;MQRankSum=-6.810;QD=4.98;ReadPosRankSum=-0.084;VQSLOD=2.9276;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,99,1283	1/1:10,0:10:9.02:116,9,0	0/1:46,0:3:0:0,0,0	0/0:74,0:8:11.62:0,12,126	./.	0/1:8,1:9:0:0,0,0	./.	1/1:9,0:8:15.04:172,15,0	0/1:6,1:7:0.05:0,0,0	0/1:28,0:28:9.41:599,0,9	./.	0/0:41,0:41:60.08:0,60,755	0/0:18,0:18:30.10:0,30,389	0/0:25,0:25:38.98:0,39,492	0/1:11,0:11:0:0,0,0	0/1:6,0:6:0:0,0,0	1/1:3,0:3:2.94:20,3,0	1/1:3,0:2:6.02:80,6,0	./.	0/0:6,5:11:0:0,0,0	0/1:19,0:18:0:0,0,0	0/0:21,0:21:36.12:0,36,467	0/0:17,0:17:30.10:0,30,390	0/0:39,0:38:44.56:0,45,584	0/1:19,2:21:0.06:0,0,0	0/0:26,0:25:54.17:0,54,702	0/0:10,0:10:21.07:0,21,273	0/0:8,0:7:15.03:0,15,195
chr10	7390497	.	C	CAT	1353.81	PASS	AB=0.733;AC=17;AF=0.354;AN=48;BaseQRankSum=6.456;DP=608;FS=0.000;HRun=0;HaplotypeScore=109.5673;InbreedingCoeff=0.7274;MQ=38.39;MQ0=34;MQRankSum=-7.588;QD=11.19;ReadPosRankSum=-0.283;VQSLOD=3.2326;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:49:99:0,114,1680	1/1:0,7:10:8.93:169,9,0	0/0:64,0:3:8.87:0,9,62	0/0:87,0:16:26.47:0,26,278	./.	0/1:3,0:6:0:0,0,0	./.	1/1:4,6:10:17.90:278,18,0	0/1:3,0:7:0.01:0,0,0	1/1:10,16:32:34.63:868,35,0	./.	0/0:44,0:44:65.11:0,65,933	0/0:21,0:21:43.26:0,43,544	0/0:26,0:25:41.74:0,42,633	1/1:2,6:12:2.94:18,3,0	./.	1/1:1,0:3:2.85:15,3,0	1/1:1,2:3:9:143,9,0	0/0:3,0:1:0:0,0,0	0/0:6,0:10:0:0,0,0	1/1:5,4:20:2.80:13,3,0	0/0:20,0:20:36.11:0,36,561	0/0:20,0:19:32.78:0,33,490	0/0:45,0:44:56.97:0,57,814	0/1:6,0:15:0:0,0,0	0/0:29,0:28:68.97:0,69,951	0/0:9,0:8:24.01:0,24,353	0/0:10,0:8:20.69:0,21,278
chr10	7390498	.	GTACA	G	369.80	PASS	AB=0.895;AC=8;AF=0.167;AN=48;BaseQRankSum=5.928;DP=609;FS=0.000;HRun=0;HaplotypeScore=117.0924;InbreedingCoeff=0.4060;MQ=38.36;MQ0=34;MQRankSum=-4.335;QD=4.51;ReadPosRankSum=-1.465;VQSLOD=1.4204;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:48:99:0,114,2857	0/0:11,0:11:11.65:0,12,152	0/0:66,0:3:9.03:0,9,222	0/0:90,0:16:40.24:0,40,816	./.	0/0:5,0:6:0:0,0,0	./.	0/1:11,0:10:16.14:16,0,363	0/0:5,0:7:0.45:0,0,1	0/1:27,7:34:99:429,0,791	./.	0/0:41,0:41:68.95:0,69,1662	0/0:21,0:21:31.15:0,31,1094	0/0:26,0:25:41.93:0,42,1131	0/0:11,1:12:3.01:0,3,52	./.	1/1:3,0:3:2.79:13,3,0	0/0:4,0:3:9.03:0,9,180	0/1:2,1:1:0:0,0,0	0/1:4,0:10:0:0,0,0	1/1:19,2:20:2.84:14,3,0	0/0:19,0:19:26.57:0,27,956	0/0:20,0:19:36.12:0,36,973	0/0:46,0:45:44.78:0,45,1559	0/0:11,0:15:0:0,0,0	0/0:31,0:29:87.12:0,87,1946	0/0:9,0:8:24.05:0,24,533	0/0:10,0:8:23.97:0,24,465
chr10	7390503	.	C	CATGT	128.87	PASS	AB=0.983;AC=10;AF=0.200;AN=50;BaseQRankSum=4.990;DP=649;FS=1.194;HRun=0;HaplotypeScore=137.8564;InbreedingCoeff=0.3776;MQ=38.47;MQ0=33;MQRankSum=-4.629;QD=1.00;ReadPosRankSum=-0.027;VQSLOD=2.1027;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:49:99:0,120,2325	0/0:13,0:12:11.10:0,11,130	0/0:62,0:3:9.03:0,9,180	0/0:83,0:15:36.12:0,36,709	./.	0/1:8,0:8:0.11:0,0,0	0/0:3,0:3:0:0,0,0	0/1:17,0:15:11.12:11,0,302	1/1:7,0:7:0.37:1,0,0	0/1:36,2:38:99:152,0,849	./.	0/0:48,0:48:62.74:0,63,1248	0/0:21,0:21:54.18:0,54,1039	0/0:28,0:27:46.40:0,46,880	0/0:12,0:12:2.90:0,3,56	./.	0/1:4,0:4:1.31:36,0,1	0/0:4,0:3:9.03:0,9,144	0/0:3,0:1:0.47:0,0,1	0/1:11,0:11:0:0,0,0	1/1:22,3:24:2.65:31,3,0	0/0:18,0:18:39.13:0,39,746	0/0:20,0:19:36.12:0,36,718	0/0:49,0:48:65.99:0,66,1234	0/1:18,0:19:0.02:0,0,0	0/0:35,0:33:93.26:0,93,1739	0/0:11,0:10:24.07:0,24,428	0/0:11,0:9:21.05:0,21,393
chr10	7390506	.	A	ACG	66.84	PASS	AB=0.991;AC=5;AF=0.104;AN=48;BaseQRankSum=5.808;DP=650;FS=0.000;HRun=0;HaplotypeScore=124.3223;InbreedingCoeff=0.4107;MQ=38.66;MQ0=31;MQRankSum=-4.585;QD=0.86;ReadPosRankSum=-0.348;VQSLOD=2.1233;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:50:99:0,123,1652	0/0:13,1:13:8.65:0,9,42	0/0:61,0:3:9.03:0,9,128	0/0:79,0:15:36.12:0,36,530	./.	0/1:8,0:8:0:0,0,0	0/0:3,0:3:0:0,0,0	0/0:17,0:15:7.47:0,7,163	0/1:7,0:7:0.05:0,0,0	0/1:37,1:38:99:136,0,193	./.	0/0:49,0:49:64.12:0,64,1003	0/0:21,0:21:53.88:0,54,731	0/0:30,0:29:47.99:0,48,682	0/0:10,2:12:2.90:0,3,44	./.	0/0:4,0:4:5.21:0,5,22	0/0:4,0:3:6.93:0,7,25	0/0:3,0:1:0.89:0,1,2	0/0:12,0:12:0:0,0,0	1/1:25,0:24:2.81:16,3,0	0/0:18,0:18:25.12:0,25,525	0/0:20,0:19:36.11:0,36,529	0/0:51,0:50:47.84:0,48,883	./.	0/0:35,0:33:96.05:0,96,1245	0/0:9,0:8:21.06:0,21,293	0/0:11,0:9:17.75:0,18,249
chr10	7390508	.	A	ACATG	410.73	PASS	AB=0.995;AC=9;AF=0.180;AN=50;BaseQRankSum=6.356;DP=655;FS=1.980;HRun=0;HaplotypeScore=134.0167;InbreedingCoeff=0.3802;MQ=38.95;MQ0=29;MQRankSum=-5.766;QD=3.73;ReadPosRankSum=-0.550;VQSLOD=2.4925;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:53:99:0,120,2105	0/0:13,1:13:10.02:0,10,42	0/0:61,0:3:9.03:0,9,171	0/0:76,0:14:36.12:0,36,607	./.	0/1:8,0:8:0:0,0,0	0/0:3,0:3:0:0,0,0	0/1:17,0:15:31.14:31,0,166	0/0:6,0:6:0:0,0,0	0/1:37,1:38:99:433,0,360	./.	0/0:51,0:51:49.95:0,50,1264	0/0:20,0:20:54.12:0,54,902	0/0:31,0:30:55.39:0,55,945	0/0:11,2:13:2.90:0,3,52	./.	0/1:4,0:4:0.90:1,0,10	0/0:4,0:3:8.82:0,9,57	1/1:4,0:2:2.83:32,3,0	0/1:13,0:13:0:0,0,0	1/1:26,0:25:3.65:21,4,0	0/0:18,0:18:41.35:0,41,733	0/0:19,0:18:33.11:0,33,625	0/0:51,0:50:62.42:0,62,1144	0/0:18,0:17:0:0,0,0	0/0:35,0:33:96.20:0,96,1602	0/0:9,0:8:21.07:0,21,393	0/0:10,0:8:15.03:0,15,275
chr10	7390510	.	ACG	A	82.58	PASS	AB=0.964;AC=10;AF=0.208;AN=48;BaseQRankSum=5.547;DP=653;FS=0.000;HRun=0;HaplotypeScore=116.2615;InbreedingCoeff=0.2812;MQ=38.93;MQ0=27;MQRankSum=-5.307;QD=0.41;ReadPosRankSum=-2.378;VQSLOD=0.9931;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:50:83.88:0,84,1917	0/0:11,2:12:7.91:0,8,40	0/0:61,0:4:9.03:0,9,171	0/1:77,0:14:9.65:10,0,487	./.	./.	0/1:3,0:3:0:0,0,0	0/1:16,1:15:55.35:55,0,125	0/1:6,0:6:0.11:0,0,0	0/1:35,3:38:96.16:96,0,378	./.	0/0:49,0:49:68.84:0,69,1152	0/0:20,0:20:28.85:0,29,824	0/0:31,0:30:53.08:0,53,840	0/0:11,2:13:2.51:0,3,57	./.	0/0:3,0:3:2.84:0,3,14	0/0:4,0:3:9.02:0,9,92	1/1:4,0:2:3.45:23,3,0	0/1:12,0:12:0:0,0,0	0/1:21,5:25:0.02:0,0,0	0/0:18,0:18:22.02:0,22,618	0/0:21,0:20:39.03:0,39,635	0/0:50,0:49:51.10:0,51,1116	0/1:20,0:19:0:0,0,0	0/0:35,0:33:76.44:0,76,1404	0/0:9,0:8:20.86:0,21,354	0/0:10,0:8:14.84:0,15,253
chr10	7390512	.	G	GCA	938.41	PASS	AB=0.914;AC=16;AF=0.333;AN=48;BaseQRankSum=5.162;DP=664;FS=0.000;HRun=0;HaplotypeScore=122.6390;InbreedingCoeff=0.4157;MQ=38.78;MQ0=27;MQRankSum=-7.520;QD=5.36;ReadPosRankSum=-3.625;VQSLOD=1.6304;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:49:99:0,111,1407	1/1:9,5:13:4.56:55,5,0	0/0:60,0:4:9.03:0,9,115	0/0:76,0:14:35.78:0,36,391	./.	0/1:6,1:7:0:0,0,0	./.	0/1:15,2:16:24.41:188,0,24	0/1:7,0:7:0.01:0,0,0	0/1:24,14:38:95.72:632,0,96	./.	0/0:48,0:48:76.31:0,76,948	0/0:20,0:20:34.43:0,34,525	0/0:35,0:34:59.63:0,60,713	1/1:10,5:15:0.89:2,1,0	./.	0/1:3,0:3:0.01:0,0,0	1/1:2,3:4:9.03:138,9,0	1/1:5,0:3:3.01:36,3,0	0/0:14,0:14:0:0,0,0	0/1:19,6:24:0.05:0,0,0	0/1:18,0:18:9.92:10,0,402	0/0:21,0:20:36.07:0,36,442	0/0:50,0:49:32.04:0,32,740	0/1:20,0:19:0:0,0,0	0/0:36,0:35:65.27:0,65,981	0/0:9,0:8:21.07:0,21,266	0/0:10,0:8:11.77:0,12,154
chr10	7390522	.	ATG	A	186.70	PASS	AB=0.933;AC=9;AF=0.188;AN=48;BaseQRankSum=6.580;DP=678;FS=6.900;HRun=0;HaplotypeScore=115.9320;InbreedingCoeff=0.3367;MQ=39.04;MQ0=27;MQRankSum=-5.824;QD=2.07;ReadPosRankSum=-1.597;VQSLOD=1.6548;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:52:99:0,121,2338	1/1:11,1:11:5.43:39,5,0	0/0:65,1:6:14.23:0,14,178	0/0:86,0:16:6.02:0,6,477	./.	./.	0/1:2,1:3:0:0,0,0	0/1:15,1:14:38.34:38,0,70	0/1:5,0:6:0.07:0,0,0	0/1:33,1:34:86.75:184,0,87	./.	0/0:43,0:43:26.97:0,27,1297	0/0:20,0:20:50.67:0,51,839	0/0:36,0:35:68.87:0,69,1203	0/0:15,0:15:2.60:0,3,20	./.	0/0:3,0:3:3.01:0,3,34	1/1:4,1:4:1.78:34,2,0	0/0:5,0:6:7.46:0,7,67	0/1:12,0:13:0:0,0,0	0/0:28,0:27:6.01:0,6,26	0/0:19,0:19:38.16:0,38,691	0/0:20,0:19:20.14:0,20,704	0/0:52,1:52:43.98:0,44,1225	0/0:17,0:18:2.99:0,3,23	0/0:38,0:36:69.87:0,70,1604	0/0:10,0:9:19.61:0,20,336	0/0:11,0:9:19.04:0,19,386
chr10	7390524	.	GCA	G	385.82	PASS	AB=0.841;AC=12;AF=0.273;AN=44;BaseQRankSum=5.805;DP=670;FS=0.752;HRun=0;HaplotypeScore=113.6171;InbreedingCoeff=0.1853;MQ=39.03;MQ0=27;MQRankSum=-4.566;QD=2.22;ReadPosRankSum=-0.892;VQSLOD=2.3399;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:52,1:52:77.49:0,77,1740	1/1:8,4:11:2.43:17,2,0	0/0:63,1:5:12:0,12,145	0/0:85,0:16:29.21:0,29,315	./.	./.	./.	0/1:14,3:14:24.99:71,0,25	0/1:4,2:6:0.03:0,0,0	0/1:24,10:34:99:282,0,102	./.	0/1:42,1:43:6.02:6,0,870	0/0:19,1:20:11.19:0,11,664	0/0:36,1:36:63.17:0,63,1005	0/0:8,7:15:2.68:0,3,11	./.	0/0:3,0:3:2.94:0,3,21	1/1:2,3:4:6:61,6,0	0/1:5,1:6:28.67:50,0,29	0/1:11,2:13:0:0,0,0	0/1:22,6:27:0.05:0,0,0	0/0:18,0:18:31.13:0,31,436	0/0:20,0:19:39.05:0,39,592	0/0:51,0:50:55.41:0,55,870	./.	0/0:34,2:34:34.96:0,35,1025	0/1:8,2:9:18.80:19,0,192	0/0:9,1:8:24.08:0,24,381
chr10	7390553	.	CAT	C	150.10	PASS	AB=0.908;AC=9;AF=0.180;AN=50;BaseQRankSum=6.350;DP=582;FS=0.711;HRun=0;HaplotypeScore=124.6244;InbreedingCoeff=0.2875;MQ=43.79;MQ0=19;MQRankSum=-4.212;QD=1.22;ReadPosRankSum=-2.546;VQSLOD=1.9681;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,126,1898	0/0:13,0:11:7.70:0,8,36	0/0:23,0:3:5.91:0,6,39	0/0:38,0:7:17.62:0,18,144	0/0:23,0:23:11.06:0,11,85	./.	1/1:3,4:7:3.01:43,3,0	0/1:23,0:20:14.78:15,0,279	0/0:5,2:7:0.44:0,0,1	0/1:32,0:32:90.74:91,0,285	0/0:19,0:19:0.47:0,0,1	0/0:35,1:36:30.79:0,31,1186	0/0:27,0:27:47.12:0,47,756	0/0:33,0:33:59.92:0,60,1012	0/0:17,0:17:8.91:0,9,66	./.	0/0:3,2:5:2.91:0,3,17	0/1:11,1:12:31.08:31,0,66	1/1:8,1:6:8.43:84,8,0	0/1:5,8:13:0:0,0,0	0/1:27,0:22:9.91:10,0,57	0/0:19,0:19:38.25:0,38,645	0/0:16,0:16:35.82:0,36,454	0/0:43,0:43:47.84:0,48,1071	./.	0/0:31,0:31:35.67:0,36,836	0/0:12,0:10:33.06:0,33,537	0/0:11,0:10:28.55:0,29,383
chr10	7390555	.	T	TAC	1182.23	PASS	AB=0.900;AC=18;AF=0.360;AN=50;BaseQRankSum=5.063;DP=594;FS=0.000;HRun=0;HaplotypeScore=131.1373;InbreedingCoeff=0.2872;MQ=44.28;MQ0=18;MQRankSum=-1.283;QD=5.28;ReadPosRankSum=-4.424;VQSLOD=1.3373;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:80.87:0,81,911	0/1:9,4:11:2.47:94,0,2	./.	0/0:37,0:8:6.01:0,6,57	1/1:20,5:25:21.07:322,21,0	0/1:8,0:8:0:0,0,0	1/1:8,0:8:1.54:21,2,0	0/1:22,1:19:53.05:160,0,53	0/1:8,0:8:0:0,0,0	1/1:23,10:34:3.05:275,3,0	0/0:18,0:18:2.84:0,3,14	0/0:35,0:36:67.67:0,68,680	0/0:28,0:28:20.14:0,20,388	0/0:33,0:34:44.96:0,45,492	1/1:10,6:18:5.36:92,5,0	./.	1/1:6,0:6:3.01:35,3,0	0/1:4,9:15:18.53:126,0,19	0/1:8,0:5:18.64:50,0,19	0/0:14,0:14:0:0,0,0	0/1:25,2:22:9.40:143,0,9	0/0:18,0:19:38.82:0,39,400	0/0:16,0:16:15.02:0,15,161	0/0:41,0:41:47.86:0,48,524	./.	0/1:28,1:31:12.01:12,0,225	0/0:12,0:10:30.08:0,30,334	0/0:10,0:11:20.87:0,21,207
chr10	7390564	.	A	ACG	414.31	PASS	AB=0.940;AC=16;AF=0.286;AN=56;BaseQRankSum=6.667;DP=622;FS=6.570;HRun=0;HaplotypeScore=138.0096;InbreedingCoeff=0.1899;MQ=46.51;MQ0=17;MQRankSum=0.193;QD=1.94;ReadPosRankSum=1.731;VQSLOD=2.2612;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:57:99:0,125,1662	0/1:13,0:11:35.02:35,0,60	0/0:20,0:6:17.95:0,18,171	0/0:33,0:10:23.93:0,24,241	0/1:23,0:23:42.98:125,0,43	1/1:8,1:9:0.09:15,0,0	1/1:9,1:11:5.97:57,6,0	0/0:24,0:21:3.63:0,4,311	0/0:5,1:6:0.47:0,0,1	0/1:40,0:40:26.84:27,0,353	0/0:21,0:21:3.01:0,3,31	0/0:36,0:36:93.44:0,93,1161	0/0:29,0:29:70.95:0,71,808	0/0:31,0:31:71.75:0,72,864	0/1:21,0:21:27.31:27,0,54	0/0:7,3:10:0:0,0,0	0/1:11,1:12:2.79:33,0,3	0/1:17,0:17:46.51:47,0,148	1/1:8,1:6:1.61:133,2,0	1/1:12,1:13:2.97:20,3,0	0/1:30,0:26:41.99:42,0,97	0/0:20,0:20:51.08:0,51,665	0/0:19,0:19:35.76:0,36,398	0/0:43,0:43:86.79:0,87,1035	0/1:5,10:15:0:0,0,0	0/0:31,0:31:68.53:0,69,821	0/0:15,0:13:42.04:0,42,544	0/0:12,0:11:33:0,33,388
chr10	7390583	.	CAT	C	2126.91	PASS	AB=1.000;AC=28;AF=0.500;AN=56;BaseQRankSum=-0.105;DP=648;FS=21.723;HRun=0;HaplotypeScore=133.5865;InbreedingCoeff=0.6440;MQ=57.26;MQ0=6;MQRankSum=-3.647;QD=6.43;ReadPosRankSum=-5.160;VQSLOD=0.5041;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:57:99:0,141,2154	0/1:14,0:13:9.30:110,0,9	0/0:20,0:14:41.91:0,42,415	0/0:19,0:14:33.73:0,34,433	1/1:26,0:26:7.39:135,7,0	1/1:10,0:10:14.97:120,15,0	1/1:16,0:16:11.99:116,12,0	0/1:33,0:31:99:253,0,107	1/1:8,0:8:5.60:26,6,0	0/1:42,0:42:26.54:330,0,27	1/1:0,21:21:3.01:48,3,0	0/0:38,0:38:66.78:0,67,1388	0/0:27,0:27:74.86:0,75,1049	0/0:28,0:28:50.40:0,50,1001	1/1:23,0:23:16.73:150,17,0	1/1:14,0:14:8.97:70,9,0	1/1:14,0:14:26.07:151,26,0	0/1:21,0:21:4.87:176,0,5	1/1:19,0:19:42.64:308,43,0	1/1:18,0:18:13.79:101,14,0	1/1:32,0:30:15.90:216,16,0	0/0:21,0:21:47.21:0,47,818	0/0:14,0:14:26.83:0,27,392	0/0:38,0:38:86.72:0,87,1274	1/1:20,0:20:2.99:24,3,0	0/0:25,0:25:45.60:0,46,815	0/0:17,0:15:45.04:0,45,713	0/0:12,0:12:32.70:0,33,466
chr10	7390689	.	G	GA	16287.93	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=12.047;DP=719;FS=0.576;HRun=1;HaplotypeScore=110.8426;InbreedingCoeff=0.9999;MQ=84.86;MQ0=0;MQRankSum=-8.250;QD=40.82;ReadPosRankSum=-0.902;VQSLOD=4.3428;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,141,1802	1/1:0,11:11:30.10:449,30,0	0/0:22,0:22:57.09:0,57,718	0/0:29,0:29:80.88:0,81,1003	1/1:0,24:24:66.22:989,66,0	1/1:0,17:17:48.16:719,48,0	1/1:0,28:28:81.27:1213,81,0	1/1:0,27:26:75.25:1122,75,0	1/1:1,21:22:57.19:854,57,0	1/1:1,35:36:99:1464,99,0	1/1:1,14:15:39.09:559,39,0	0/0:32,0:32:87.26:0,87,1099	0/0:25,0:25:75.24:0,75,973	0/0:29,0:29:81.26:0,81,1052	1/1:0,23:23:69.23:1034,69,0	1/1:0,28:28:78.26:1168,78,0	1/1:3,30:33:90.25:1304,90,0	1/1:0,28:28:75.25:1124,75,0	1/1:1,16:17:45.15:674,45,0	1/1:0,23:23:63.21:943,63,0	1/1:2,42:44:99:1753,117,0	0/0:25,0:25:69.21:0,69,881	0/0:24,0:24:69.22:0,69,895	0/0:28,0:28:78.19:0,78,979	1/1:1,22:23:63.17:918,63,0	0/0:29,1:30:42.29:0,42,1033	0/0:14,0:14:36.12:0,36,467	0/0:11,0:11:33.11:0,33,429
chr10	7391689	.	TCTTTCTTTCTTCCTTCCTTTCTTC	T	16935.71	PASS	AB=1.000;AC=28;AF=0.500;AN=56;BaseQRankSum=7.618;DP=519;FS=11.724;HRun=0;HaplotypeScore=312.1841;InbreedingCoeff=0.6983;MQ=60.32;MQ0=12;MQRankSum=-2.156;QD=57.80;ReadPosRankSum=3.236;VQSLOD=2.6670;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:35:72.17:0,72,2215	1/1:9,0:9:27.09:1041,27,0	0/0:14,0:11:30.07:0,30,686	0/0:8,0:6:11.93:0,12,141	1/1:1,20:21:54.07:1444,54,0	1/1:17,0:16:19.51:901,20,0	0/1:15,0:15:6.87:708,0,7	1/1:3,38:40:99:1890,110,0	1/1:21,0:19:3.09:897,3,0	1/1:28,0:28:81.25:2590,81,0	1/1:19,0:19:51.12:1709,51,0	0/0:9,0:9:21.97:0,22,714	0/0:26,0:25:72.18:0,72,2570	0/0:7,0:7:15.05:0,15,567	1/1:6,0:6:18.06:703,18,0	0/1:9,0:8:9.04:304,0,9	1/1:22,0:22:58.29:1131,58,0	1/1:17,0:15:27.09:844,27,0	0/1:15,0:14:54.16:392,0,54	0/1:19,0:19:31.94:658,0,32	1/1:9,0:8:17.93:276,18,0	0/0:11,0:10:24.07:0,24,859	0/0:25,0:25:63.17:0,63,2178	0/0:22,0:21:32.53:0,33,1871	1/1:25,0:25:18.23:1449,18,0	0/0:15,0:15:18.56:0,19,1524	0/0:24,0:23:69.21:0,69,2528	0/0:28,0:24:75.13:0,75,2094
chr10	7391697	.	TCTTCCTTCCTTTCTTCCTTC	T	17131.29	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=4.428;DP=506;FS=14.792;HRun=0;HaplotypeScore=252.9281;InbreedingCoeff=0.9801;MQ=56.83;MQ0=25;MQRankSum=-0.098;QD=61.40;ReadPosRankSum=1.438;VQSLOD=2.7743;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:33:66.19:0,66,1693	1/1:10,0:10:27.09:819,27,0	0/0:13,0:10:24.07:0,24,465	0/0:7,0:5:11.95:0,12,134	1/1:20,0:20:48.12:1114,48,0	1/1:18,0:16:45.14:1271,45,0	1/1:15,0:15:36.12:1029,36,0	1/1:38,0:37:85.38:1142,85,0	1/1:19,0:17:51.15:1362,51,0	1/1:27,0:27:66.22:1902,66,0	1/1:17,0:17:45.13:1294,45,0	0/0:11,0:10:19:0,19,545	0/0:28,0:27:63.67:0,64,1967	0/0:8,0:7:15.04:0,15,433	1/1:6,0:6:18.06:566,18,0	1/1:7,0:6:18.05:458,18,0	1/1:29,0:22:63.16:1634,63,0	1/1:15,0:13:27.09:650,27,0	1/1:1,10:10:27.06:643,27,0	1/1:17,0:16:42.13:1034,42,0	1/1:8,0:6:11.07:147,11,0	0/0:8,0:7:21.05:0,21,648	0/0:22,0:21:57.20:0,57,1776	0/0:24,0:21:12.85:0,13,1456	1/1:22,0:22:66.23:2065,66,0	0/0:16,0:16:48.16:0,48,1371	0/0:25,0:23:66.23:0,66,2055	0/0:30,0:26:66.19:0,66,1628
chr10	7391818	.	C	CTG	4117.36	PASS	AC=14;AF=0.259;AN=54;BaseQRankSum=-9.173;DP=533;FS=12.084;HRun=0;HaplotypeScore=70.0260;InbreedingCoeff=0.9628;MQ=57.56;MQ0=25;MQRankSum=2.002;QD=24.95;ReadPosRankSum=-1.649;VQSLOD=3.4915;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:75.24:0,75,975	1/1:1,11:12:18.06:303,18,0	0/0:15,0:11:30.98:0,31,388	0/0:12,0:8:15.65:0,16,158	1/1:8,22:29:63.22:1054,63,0	0/0:18,0:15:33.11:0,33,429	0/0:12,0:12:33.11:0,33,429	1/1:11,30:36:87.26:1428,87,0	0/0:13,0:10:27.07:0,27,337	1/1:7,15:21:39.12:623,39,0	1/1:6,18:22:27.09:455,27,0	0/0:14,0:13:33.09:0,33,415	0/0:19,0:18:39.11:0,39,492	0/0:18,0:18:45.13:0,45,571	1/1:5,15:18:5.80:102,6,0	0/0:17,0:16:48.11:0,48,577	0/0:16,0:14:39.08:0,39,484	1/1:5,11:13:9.03:152,9,0	0/0:17,0:16:34.65:0,35,563	0/0:23,0:23:48.16:0,48,621	./.	0/0:8,0:8:24.08:0,24,312	0/0:22,0:21:51.10:0,51,603	0/0:29,0:27:49.14:0,49,656	0/0:13,0:13:33.11:0,33,429	0/0:23,0:19:51.16:0,51,651	0/0:23,0:20:54.15:0,54,685	0/0:14,0:13:21.07:0,21,273
chr10	7391892	.	T	TC	6077.32	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-13.029;DP=543;FS=1.171;HRun=2;HaplotypeScore=52.5230;InbreedingCoeff=0.9993;MQ=71.94;MQ0=0;MQRankSum=1.218;QD=38.46;ReadPosRankSum=3.226;VQSLOD=5.3148;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,99,1210	0/0:9,0:9:27.08:0,27,334	0/0:18,0:17:42.12:0,42,508	0/0:11,0:10:30.08:0,30,357	0/0:20,0:20:57.17:0,57,690	1/1:0,15:15:33.11:475,33,0	1/1:1,14:15:36.12:519,36,0	0/0:21,0:21:48.15:0,48,595	1/1:0,22:22:63.21:906,63,0	0/0:17,0:17:48.15:0,48,595	0/0:16,0:16:39.12:0,39,482	0/0:12,0:12:30.08:0,30,358	0/0:17,0:17:33.10:0,33,409	0/0:16,0:16:48.15:0,48,593	0/0:19,0:19:27.01:0,27,318	1/1:0,19:19:57.19:821,57,0	1/1:0,23:23:63.21:907,63,0	0/0:18,0:18:42.13:0,42,520	1/1:2,16:18:45.15:646,45,0	1/1:1,19:20:54.18:767,54,0	0/0:27,0:27:69.22:0,69,854	0/0:12,0:12:33.10:0,33,409	0/0:22,0:22:66.21:0,66,818	0/0:29,0:29:87.27:0,87,1077	1/1:0,26:26:72.24:1037,72,0	0/0:20,0:20:60.19:0,60,744	0/0:28,0:27:84.26:0,84,1032	0/0:16,0:16:48.15:0,48,595
chr10	7392341	.	G	GACTA	20447.63	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=-9.709;DP=611;FS=2.240;HRun=0;HaplotypeScore=95.4454;InbreedingCoeff=0.9987;MQ=89.83;MQ0=0;MQRankSum=-8.257;QD=63.11;ReadPosRankSum=0.440;VQSLOD=6.9357;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:64,0:64:99:0,184,3210	1/1:2,9:11:27.09:719,27,0	0/0:21,0:21:54.09:0,54,898	0/0:33,0:33:70.28:0,70,1274	1/1:3,12:17:36.04:830,36,0	1/1:3,19:23:57.20:1508,57,0	1/1:4,21:27:60.18:1540,60,0	1/1:7,28:35:99:2585,99,0	1/1:5,15:20:48.16:1275,48,0	1/1:0,19:20:57.18:1463,57,0	1/1:1,18:20:48.16:1278,48,0	0/0:15,0:15:42.14:0,42,784	0/0:25,0:25:69.15:0,69,1286	0/0:13,0:13:30.10:0,30,560	1/1:1,10:11:27.09:719,27,0	1/1:0,20:20:57.20:1519,57,0	1/1:1,25:27:63.22:1673,63,0	1/1:1,13:15:27.09:719,27,0	1/1:3,16:19:48.16:1268,48,0	1/1:3,11:14:27.06:660,27,0	1/1:1,26:29:66.23:1732,66,0	0/0:15,0:15:39.12:0,39,690	0/0:11,0:11:33.10:0,33,575	0/0:40,0:40:95.33:0,95,1680	1/1:2,13:15:36.12:959,36,0	0/0:23,0:23:66.22:0,66,1203	0/0:20,0:20:54.18:0,54,1007	0/0:7,0:7:21.07:0,21,392
chr10	7393576	.	T	TGA	5215.68	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-8.767;DP=470;FS=0.000;HRun=0;HaplotypeScore=61.2331;InbreedingCoeff=0.9935;MQ=77.00;MQ0=0;MQRankSum=1.207;QD=44.58;ReadPosRankSum=2.673;VQSLOD=6.5060;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:96.30:0,96,1382	0/0:5,0:5:15.05:0,15,221	0/0:10,0:10:24.03:0,24,296	0/0:18,0:18:16.95:0,17,509	0/0:20,0:20:57.19:0,57,834	1/1:2,16:19:39.13:729,39,0	1/1:1,19:21:42.01:786,42,0	0/0:23,0:23:60.20:0,60,884	1/1:0,12:12:30.10:560,30,0	0/0:11,0:10:27.09:0,27,398	0/0:10,0:10:30.10:0,30,442	0/0:18,0:18:54.16:0,54,771	0/0:9,0:9:24.08:0,24,353	0/0:20,0:20:60.20:0,60,871	0/0:16,0:16:48.16:0,48,706	0/0:13,0:13:39.13:0,39,573	1/1:1,17:18:45.15:843,45,0	0/0:24,0:24:66.22:0,66,971	1/1:1,15:16:45.13:780,45,0	1/1:0,20:20:54.19:1011,54,0	0/0:18,0:18:54.18:0,54,795	0/0:19,0:19:57.18:0,57,818	0/0:15,0:15:42.13:0,42,597	0/0:23,0:23:69.19:0,69,970	1/1:0,10:11:27.09:506,27,0	0/0:18,0:18:51.16:0,51,731	0/0:8,0:8:24.08:0,24,352	0/0:22,0:22:60.20:0,60,878
chr10	7393697	.	TACACACGCGCGTGCACGCGCGCGCGCGC	T	8370.46	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=8.603;DP=429;FS=7.439;HRun=0;HaplotypeScore=292.6853;InbreedingCoeff=0.9592;MQ=69.52;MQ0=2;MQRankSum=-6.807;QD=100.85;ReadPosRankSum=1.665;VQSLOD=3.4911;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,156,15136	0/0:6,0:6:12.04:0,12,986	0/0:11,0:8:20.92:0,21,211	0/0:10,0:8:23.47:0,23,220	0/0:19,0:19:29.96:0,30,1311	1/1:11,8:20:39.09:2185,39,0	1/1:7,1:8:8.98:266,9,0	0/0:25,0:25:75.21:0,75,3053	1/1:1,11:12:15.05:1079,15,0	0/0:21,0:21:63.17:0,63,4821	0/0:14,0:14:20.88:0,21,1077	0/0:12,0:12:23.99:0,24,1686	0/0:8,0:8:21.04:0,21,709	0/0:13,0:13:22.62:0,23,1047	0/0:11,0:11:30:0,30,1290	0/0:13,0:13:31.34:0,31,2586	1/1:6,2:8:17.94:524,18,0	0/0:26,0:26:48.13:0,48,2674	1/1:8,4:12:35.58:1255,36,0	1/1:5,5:10:21.06:1183,21,0	0/0:29,0:29:60.10:0,60,3294	0/0:11,0:11:15.69:0,16,709	0/0:13,0:13:20.43:0,20,836	0/0:22,0:22:21.02:0,21,766	1/1:4,9:13:27.09:1878,27,0	0/0:17,0:17:48.15:0,48,3155	0/0:10,0:10:20.79:0,21,1524	0/0:3,0:3:9.03:0,9,627
chr10	7393702	.	ACGCGCGTG	A	2049.73	PASS	AB=1.000;AC=16;AF=0.286;AN=56;BaseQRankSum=9.555;DP=409;FS=7.542;HRun=0;HaplotypeScore=168.8712;InbreedingCoeff=0.8144;MQ=61.39;MQ0=2;MQRankSum=-6.824;QD=23.03;ReadPosRankSum=4.274;VQSLOD=2.2078;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,157,6157	0/0:7,0:7:14.08:0,14,426	0/1:6,0:3:0.83:1,0,21	0/1:8,0:6:3.02:20,0,3	0/0:16,0:16:14.98:0,15,495	1/1:16,2:18:30.09:544,30,0	1/1:4,1:5:3.01:80,3,0	0/0:26,0:26:68.80:0,69,1522	1/1:11,1:12:15.05:304,15,0	0/0:22,0:22:63.21:0,63,2043	0/0:13,0:13:17.89:0,18,448	0/0:11,0:11:21:0,21,645	0/0:6,0:6:15.02:0,15,310	0/0:12,0:12:20.80:0,21,474	0/0:11,0:11:26.99:0,27,576	0/0:12,0:12:27.05:0,27,1019	1/1:7,1:8:6.02:139,6,0	0/0:27,0:27:18.02:0,18,1206	1/1:9,1:10:15.05:332,15,0	1/1:8,1:9:18.05:334,18,0	0/0:25,0:25:45.08:0,45,1327	0/0:11,0:11:19.35:0,19,419	0/0:14,0:14:23.79:0,24,444	0/0:20,0:20:12:0,12,340	1/1:10,3:13:24.08:481,24,0	0/0:17,0:17:42.13:0,42,1408	0/0:11,0:11:23.68:0,24,726	0/0:5,0:5:15.05:0,15,369
chr10	7393712	.	ACGCGCGCGCGCGCG	A	3596.72	PASS	AB=0.924;AC=16;AF=0.296;AN=54;BaseQRankSum=9.050;DP=373;FS=4.078;HRun=0;HaplotypeScore=189.8993;InbreedingCoeff=0.7026;MQ=52.04;MQ0=4;MQRankSum=-8.133;QD=43.33;ReadPosRankSum=4.561;VQSLOD=3.1637;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,157,9574	0/1:7,0:8:4.95:5,0,602	./.	0/0:4,0:2:5.69:0,6,63	0/0:15,0:15:14.98:0,15,602	1/1:9,1:11:27.09:913,27,0	1/1:1,0:2:3.01:103,3,0	0/0:15,0:16:32.28:0,32,1095	1/1:11,1:12:15.05:494,15,0	0/0:25,0:26:73.47:0,73,2720	0/0:15,0:15:20.89:0,21,571	0/0:13,0:13:27.01:0,27,905	0/0:5,0:5:9.03:0,9,281	0/0:13,0:13:20.16:0,20,383	0/0:9,0:9:23.99:0,24,585	0/0:14,0:14:33.02:0,33,1311	1/1:2,0:3:6.02:206,6,0	0/1:23,0:24:10.80:11,0,1447	1/1:4,0:5:15.05:529,15,0	1/1:5,1:6:15.05:509,15,0	0/0:23,0:22:36.09:0,36,1257	0/0:13,0:13:22:0,22,467	0/0:14,0:14:20.69:0,21,449	0/0:17,0:17:6.02:0,6,287	1/1:9,3:12:27.04:828,27,0	0/0:18,0:18:1.16:0,1,1941	0/0:10,0:10:20.27:0,20,845	0/0:7,0:6:18.03:0,18,509
chr10	7393722	.	G	GCGCACACA	3053.04	PASS	AB=0.993;AC=16;AF=0.308;AN=52;BaseQRankSum=1.615;DP=381;FS=4.121;HRun=0;HaplotypeScore=163.5828;InbreedingCoeff=-0.0559;MQ=47.93;MQ0=7;MQRankSum=-6.598;QD=15.90;ReadPosRankSum=-2.532;VQSLOD=2.3924;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,162,4117	0/1:10,0:10:11.84:211,0,12	./.	./.	1/1:16,0:16:2.46:22,2,0	0/0:11,0:11:27.09:0,27,431	0/0:2,0:2:2.50:0,2,9	0/1:19,0:19:32.25:329,0,32	0/0:12,0:12:14.64:0,15,232	0/1:23,0:22:99:665,0,134	0/1:16,0:16:14.65:205,0,15	0/1:18,0:18:35.75:208,0,36	0/0:5,0:5:3.01:0,3,67	0/1:9,0:9:0:0,0,0	1/1:8,0:8:3.01:107,3,0	0/1:13,0:14:6.90:352,0,7	0/0:3,0:3:5.38:0,5,64	0/1:25,0:24:49.99:532,0,50	0/0:5,0:5:9.20:0,9,168	0/0:6,0:6:14.26:0,14,224	0/0:13,6:20:2.99:0,3,24	0/0:17,0:17:5.98:0,6,68	0/0:17,0:17:3.01:0,3,58	0/0:15,0:15:2.37:0,2,66	0/0:12,0:12:3.21:0,3,359	0/1:18,0:18:86.92:354,0,87	0/1:10,0:10:78.06:78,0,151	1/1:6,0:4:9.02:132,9,0
chr10	7393724	.	G	GCACACACA	4683.94	PASS	AB=1.000;AC=31;AF=0.574;AN=54;BaseQRankSum=0.579;DP=380;FS=0.000;HRun=0;HaplotypeScore=159.3139;InbreedingCoeff=0.3172;MQ=48.16;MQ0=7;MQRankSum=-5.411;QD=19.68;ReadPosRankSum=-1.257;VQSLOD=4.2114;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:56:99:0,163,3843	1/1:2,6:9:11.84:301,12,0	1/1:4,0:1:2.68:11,3,0	./.	1/1:5,0:15:6:72,6,0	0/0:11,0:11:26.96:0,27,333	1/1:2,0:2:1.82:5,2,0	1/1:20,0:20:44.28:572,44,0	0/0:12,0:12:9.87:0,10,205	1/1:6,14:22:19.75:965,20,0	1/1:2,11:17:5.98:249,6,0	0/1:18,0:18:13.52:263,0,14	0/0:5,0:5:3.01:0,3,43	0/1:8,0:8:0:0,0,0	1/1:0,7:7:3.01:125,3,0	1/1:11,3:15:21.32:497,21,0	0/1:3,0:3:2.86:3,0,49	1/1:7,16:24:15.01:710,15,0	0/1:5,0:5:16.11:16,0,146	0/0:6,0:6:7.08:0,7,189	1/1:20,1:19:15.45:124,15,0	0/0:16,0:17:5.97:0,6,46	0/0:18,0:18:2.55:0,3,56	0/0:14,0:14:2.36:0,2,43	0/1:12,0:12:21.76:22,0,301	0/1:18,0:18:35.63:478,0,36	0/1:10,0:10:82.78:97,0,83	1/1:5,0:4:9.03:174,9,0
chr10	7393726	.	G	GCACACACA	6530.83	PASS	AB=0.835;AC=36;AF=0.667;AN=54;BaseQRankSum=-1.908;DP=435;FS=7.425;HRun=0;HaplotypeScore=183.9948;InbreedingCoeff=0.4186;MQ=47.72;MQ0=8;MQRankSum=-4.320;QD=20.28;ReadPosRankSum=-2.804;VQSLOD=3.0631;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:58:99:0,132,2512	1/1:11,0:11:11.86:321,12,0	1/1:4,0:1:2.99:23,3,0	./.	0/1:19,0:19:2.77:64,0,3	0/0:11,0:11:27.03:0,27,318	0/1:6,0:6:4.22:16,0,4	1/1:26,0:26:68.77:1090,69,0	0/0:11,0:11:9.80:0,10,185	1/1:23,0:22:47.47:1091,47,0	1/1:19,0:19:6.49:252,6,0	1/1:4,16:20:11.18:387,11,0	1/1:3,4:9:2.98:21,3,0	0/1:1,7:10:0:0,0,0	1/1:7,0:7:3.01:125,3,0	1/1:16,0:16:21.48:501,21,0	0/1:5,0:5:2.67:3,0,38	1/1:24,0:23:24.04:753,24,0	0/1:8,0:7:56.73:57,0,100	0/0:9,0:9:7.07:0,7,159	1/1:20,0:18:17.95:168,18,0	0/1:6,13:20:0:0,0,0	0/0:5,14:20:2.55:0,3,62	0/1:5,12:21:0:1,0,0	0/1:12,0:12:27.44:27,0,260	1/1:5,13:19:38.90:909,39,0	1/1:8,5:15:13.60:351,14,0	1/1:5,2:6:15.01:370,15,0
chr10	7393742	.	ACG	A	1856.55	PASS	AB=0.983;AC=20;AF=0.357;AN=56;BaseQRankSum=6.955;DP=515;FS=0.468;HRun=0;HaplotypeScore=175.1190;InbreedingCoeff=0.4832;MQ=50.22;MQ0=9;MQRankSum=-4.370;QD=7.61;ReadPosRankSum=1.626;VQSLOD=3.2522;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:63,0:63:99:0,135,2469	0/1:13,0:13:4.24:4,0,136	0/0:10,0:4:8.95:0,9,80	0/0:11,0:8:14.37:0,14,126	0/0:18,0:18:11.60:0,12,74	1/1:9,9:18:39.06:411,39,0	1/1:16,1:17:17.76:158,18,0	0/1:34,0:32:28.74:29,0,491	1/1:14,4:18:31.50:277,32,0	0/1:20,0:19:30.22:30,0,246	0/0:17,0:17:22.94:0,23,157	0/1:19,1:20:21.51:22,0,121	0/0:8,0:8:2.74:0,3,12	0/0:10,0:10:5.09:0,5,23	0/0:7,0:7:9.34:0,9,51	0/0:17,0:17:10.63:0,11,281	1/1:11,2:13:23.59:174,24,0	0/1:26,0:25:22.39:22,0,242	1/1:11,4:14:37.26:322,37,0	1/1:7,5:12:17.87:188,18,0	0/0:20,0:18:20.87:0,21,207	0/0:18,0:18:15.20:0,15,72	0/0:21,0:20:22.06:0,22,146	0/0:21,0:21:14.59:0,15,132	1/1:11,9:20:38.55:402,39,0	0/1:17,1:18:13.01:13,0,286	0/0:16,1:17:27.47:0,27,203	0/0:13,0:11:32.53:0,33,284
chr10	7393750	.	ACG	A	1965.79	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=6.331;DP=535;FS=0.000;HRun=0;HaplotypeScore=178.6735;InbreedingCoeff=0.9107;MQ=60.77;MQ0=5;MQRankSum=-3.245;QD=15.60;ReadPosRankSum=2.729;VQSLOD=3.6683;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,157,2689	0/0:13,0:13:1.88:0,2,317	0/0:22,0:17:46.97:0,47,515	0/0:14,0:11:29.07:0,29,425	0/0:17,0:17:11.67:0,12,134	1/1:16,3:19:39.06:409,39,0	1/1:18,0:18:22.63:206,23,0	0/0:35,0:33:83.11:0,83,1110	1/1:20,0:20:35.71:320,36,0	0/0:21,0:20:33.05:0,33,653	0/0:17,0:17:26.01:0,26,325	0/0:20,0:20:28.72:0,29,275	0/0:8,0:8:5.70:0,6,32	0/0:9,0:9:5.22:0,5,24	0/0:10,0:10:21.29:0,21,182	0/0:16,0:16:32.45:0,32,485	1/1:13,0:13:23.50:169,23,0	0/0:22,0:21:41.56:0,42,643	1/1:19,1:18:44.12:406,44,0	1/1:7,7:14:20.45:198,20,0	0/0:16,0:16:20.96:0,21,297	0/0:15,0:15:15.76:0,16,109	0/0:23,0:22:34.09:0,34,319	0/0:25,0:25:20.72:0,21,334	1/1:22,0:22:44.43:453,44,0	0/0:17,0:17:26.37:0,26,549	0/0:17,0:17:31.36:0,31,508	0/0:17,0:16:47.74:0,48,704
chr10	7394315	.	C	CT	7670.52	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-7.572;DP=799;FS=6.769;HRun=1;HaplotypeScore=133.4135;InbreedingCoeff=0.9997;MQ=83.36;MQ0=0;MQRankSum=-2.489;QD=44.86;ReadPosRankSum=1.349;VQSLOD=3.7473;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,150,2080	0/0:9,0:9:27.09:0,27,376	0/0:20,0:20:56.86:0,57,719	0/0:25,0:27:49.06:0,49,958	0/0:37,0:37:99:0,105,1465	1/1:2,21:23:63.21:1007,63,0	1/1:1,26:27:69.19:1075,69,0	0/0:31,0:31:93.29:0,93,1269	1/1:0,37:37:99:1630,102,0	0/0:28,0:28:84.27:0,84,1161	0/0:27,0:27:75.25:0,75,1043	0/0:26,0:26:78.25:0,78,1073	0/0:36,0:36:99:0,108,1508	0/0:32,0:32:96.32:0,96,1342	0/0:54,0:54:99:0,156,2145	0/0:30,0:30:90.29:0,90,1243	1/1:0,20:20:60.20:959,60,0	0/0:26,0:26:78.23:0,78,1070	1/1:0,20:20:60.19:937,60,0	1/1:0,22:22:63.21:1007,63,0	0/0:58,0:58:99:0,163,2238	0/0:25,0:25:72.24:0,72,1007	0/0:22,0:22:60.15:0,60,782	0/0:23,0:23:69.19:0,69,943	1/1:0,22:22:66.23:1055,66,0	0/0:32,0:32:93.30:0,93,1282	0/0:25,0:25:75.24:0,75,1032	0/0:10,0:10:30.10:0,30,419
chr10	7394499	.	TC	T	5239.68	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=17.675;DP=738;FS=4.746;HRun=2;HaplotypeScore=97.5645;InbreedingCoeff=0.9990;MQ=86.71;MQ0=0;MQRankSum=-3.296;QD=34.02;ReadPosRankSum=2.568;VQSLOD=5.0379;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,123,1812	0/0:13,0:13:36.12:0,36,540	0/0:32,0:32:85.09:0,85,1320	0/0:22,0:21:20.19:0,20,700	0/0:19,0:19:57.19:0,57,854	1/1:0,23:23:60.19:743,60,0	1/1:2,12:14:36.11:446,36,0	0/0:25,0:25:72.24:0,72,1061	1/1:0,32:32:96.30:1189,96,0	0/0:28,0:28:84.28:0,84,1237	0/0:15,0:15:45.15:0,45,672	0/0:28,0:28:81.01:0,81,1213	0/0:33,0:33:99:0,99,1463	0/0:32,0:32:93.30:0,93,1374	0/0:40,0:40:99:0,117,1693	0/0:37,0:37:99:0,111,1633	1/1:0,20:20:53.96:669,54,0	0/0:18,0:18:51.17:0,51,764	1/1:1,18:19:54.17:668,54,0	1/1:0,25:25:63.20:781,63,0	0/0:67,0:67:99:0,193,2825	0/0:27,0:27:75.24:0,75,1099	0/0:19,0:19:50.93:0,51,763	0/0:27,0:27:75.25:0,75,1106	1/1:1,20:21:60.19:743,60,0	0/0:19,0:19:54.17:0,54,791	0/0:19,0:19:57.15:0,57,826	0/0:21,0:21:63.21:0,63,942
chr10	7394656	.	AGAGAGAGAGAGAGAGAGAGAGAGAGT	A	1180.17	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=-1.237;DP=502;FS=30.839;HRun=0;HaplotypeScore=257.0356;InbreedingCoeff=-0.1352;MQ=50.73;MQ0=15;MQRankSum=0.766;QD=4.14;ReadPosRankSum=-7.478;VQSLOD=-0.5495;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:18,0:16:36.65:37,0,1478	0/0:11,0:11:3.42:0,3,1757	0/0:4,0:2:6.02:0,6,93	0/0:18,0:8:17.26:0,17,229	0/0:20,0:20:5.19:0,5,1513	0/1:22,0:22:47.87:48,0,1286	0/1:10,0:9:12.86:13,0,519	0/1:26,0:23:10.72:11,0,1669	0/0:24,0:24:18.06:0,18,665	0/1:17,0:16:99:120,0,1663	0/1:16,0:16:9.75:10,0,940	0/1:15,0:15:18.61:19,0,1423	0/1:26,0:26:32.31:32,0,2806	0/1:9,0:9:8.04:8,0,881	0/0:19,0:19:17.49:0,17,1562	0/1:20,0:19:55.55:56,0,1413	0/1:32,0:31:34.97:35,0,2183	0/0:22,0:19:24.18:0,24,1727	0/0:13,0:13:33.48:0,33,1198	0/0:17,0:17:24.06:0,24,960	0/1:11,0:11:35.82:36,0,412	0/0:21,0:21:10.86:0,11,1706	0/1:14,0:14:31.77:32,0,582	0/0:26,0:24:2.61:0,3,2810	0/0:22,0:22:6.91:0,7,294	1/1:4,16:20:44.37:590,44,0	1/1:7,17:23:2.27:212,2,0	1/1:5,0:5:11.93:89,12,0
chr10	7394672	.	AGAGAGAGAGT	A	6396.15	PASS	AB=0.995;AC=37;AF=0.661;AN=56;BaseQRankSum=1.423;DP=542;FS=41.679;HRun=0;HaplotypeScore=142.7923;InbreedingCoeff=-0.0981;MQ=61.96;MQ0=12;MQRankSum=0.074;QD=13.13;ReadPosRankSum=5.338;VQSLOD=1.8927;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:21:15.89:241,0,16	0/1:12,0:12:99:120,0,275	0/0:14,0:13:30.79:0,31,368	0/0:21,0:13:31.91:0,32,413	0/1:21,0:21:62.72:253,0,63	1/1:22,0:22:38.95:398,39,0	0/1:11,0:10:32.09:137,0,32	0/1:34,0:33:7.93:415,0,8	1/1:0,27:27:12.04:401,12,0	0/1:25,0:24:99:469,0,278	0/1:23,0:23:99:259,0,104	0/1:17,0:17:99:174,0,197	0/1:26,0:26:99:300,0,311	0/1:10,0:10:91.58:92,0,95	0/0:20,0:20:14.46:0,14,329	1/1:21,0:20:26.25:371,26,0	0/1:28,2:29:17.89:568,0,18	1/1:20,0:17:31.98:334,32,0	1/1:11,0:11:20.31:237,20,0	1/1:15,0:15:5.95:44,6,0	1/1:17,0:17:17:227,17,0	0/1:23,0:23:81.16:243,0,81	1/1:16,0:16:2.03:174,2,0	0/1:27,0:25:99:163,0,253	1/1:1,14:15:4.83:106,5,0	1/1:16,0:16:44.90:419,45,0	1/1:18,0:16:2.69:81,3,0	1/1:7,0:7:20.96:171,21,0
chr10	7394678	.	AGAGT	A	7519.59	PASS	AB=1.000;AC=51;AF=0.911;AN=56;BaseQRankSum=2.749;DP=520;FS=0.000;HRun=0;HaplotypeScore=89.7456;InbreedingCoeff=0.5763;MQ=66.92;MQ0=11;MQRankSum=-2.101;QD=15.70;ReadPosRankSum=4.430;VQSLOD=4.2325;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:18:41.77:332,42,0	1/1:9,0:9:20.97:175,21,0	0/0:17,0:16:31.89:0,32,425	0/0:24,0:16:40.03:0,40,516	1/1:16,0:16:41.95:348,42,0	1/1:17,0:17:40.53:300,41,0	1/1:12,0:11:29.79:230,30,0	1/1:38,0:37:65.14:643,65,0	1/1:27,0:27:12.04:161,12,0	0/1:29,0:29:18.76:600,0,19	1/1:20,0:20:35.96:301,36,0	1/1:16,0:16:35.61:282,36,0	1/1:24,0:24:56.09:435,56,0	1/1:11,0:11:29.81:238,30,0	1/1:2,15:17:2.84:53,3,0	1/1:20,0:19:53.77:455,54,0	1/1:29,0:28:53.02:478,53,0	1/1:17,0:15:38.07:300,38,0	1/1:12,0:12:26.80:248,27,0	1/1:14,0:14:2.96:19,3,0	1/1:18,0:18:41.91:339,42,0	1/1:19,0:19:38.81:310,39,0	1/1:15,0:15:29.93:243,30,0	1/1:23,0:21:47.52:379,48,0	1/1:14,0:14:3.01:40,3,0	1/1:16,0:16:44.89:377,45,0	1/1:18,0:16:2.95:39,3,0	1/1:8,0:8:23.96:195,24,0
chr10	7394680	.	AGT	A	7528.05	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=2.376;DP=521;FS=0.000;HRun=0;HaplotypeScore=74.3075;InbreedingCoeff=0.7129;MQ=67.99;MQ0=10;MQRankSum=-5.151;QD=15.72;ReadPosRankSum=3.702;VQSLOD=4.5628;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:18:41.61:331,42,0	1/1:7,0:7:20.98:175,21,0	0/0:17,0:16:31.42:0,31,423	0/0:25,0:17:46.67:0,47,545	1/1:16,0:16:41.95:348,42,0	1/1:17,0:17:38.75:295,39,0	1/1:12,0:11:29.79:230,30,0	1/1:39,0:38:68.82:649,69,0	1/1:27,0:27:12:106,12,0	1/1:29,0:29:60.51:667,61,0	1/1:18,0:18:35.96:301,36,0	1/1:18,0:18:38.63:313,39,0	1/1:22,0:22:53.19:418,53,0	1/1:13,0:13:32.82:267,33,0	1/1:16,0:16:2.94:23,3,0	1/1:20,0:19:50.80:421,51,0	1/1:29,0:28:53.81:455,54,0	1/1:16,0:15:38.79:300,39,0	1/1:13,0:13:29.83:271,30,0	1/1:0,14:14:2.96:19,3,0	1/1:17,0:17:44.90:364,45,0	1/1:18,0:18:35.44:286,35,0	1/1:16,0:16:32.92:268,33,0	1/1:24,0:22:44.61:363,45,0	1/1:14,0:14:3:26,3,0	1/1:16,0:16:44.88:363,45,0	1/1:18,0:16:2.99:25,3,0	1/1:10,0:10:29.95:244,30,0
chr10	7397302	.	T	TCTTCCTTCCTTCCTTC	24670.38	PASS	AB=1.000;AC=33;AF=0.589;AN=56;BaseQRankSum=4.499;DP=751;FS=1.057;HRun=0;HaplotypeScore=363.7708;InbreedingCoeff=0.9112;MQ=56.55;MQ0=1;MQRankSum=-12.547;QD=51.61;ReadPosRankSum=-2.522;VQSLOD=3.2569;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:57:99:0,119,5047	1/1:9,0:9:24.08:1130,24,0	0/0:21,0:16:30.08:0,30,907	0/0:18,0:15:26.64:0,27,795	1/1:9,28:42:17.98:656,18,0	1/1:35,0:35:31.68:1921,32,0	1/1:11,0:11:23.87:321,24,0	1/1:44,0:44:80.98:1879,81,0	1/1:33,0:33:79.65:1785,80,0	1/1:6,16:35:69.08:3060,69,0	1/1:25,0:25:56.99:2492,57,0	0/0:17,0:17:27.07:0,27,826	0/0:21,0:21:54.15:0,54,2030	0/0:18,0:18:33.10:0,33,1141	1/1:29,0:29:72.25:3384,72,0	1/1:2,12:21:9.03:688,9,0	1/1:22,0:22:38.30:1096,38,0	1/1:16,0:16:12.04:591,12,0	1/1:42,0:42:50.63:1506,51,0	1/1:35,0:35:23.25:1193,23,0	1/1:18,0:18:26.95:979,27,0	0/0:28,0:28:66.18:0,66,2410	0/0:21,0:21:42.97:0,43,1446	0/0:17,0:17:39.09:0,39,1126	1/1:41,0:41:45.36:1815,45,0	0/1:20,0:20:99:176,0,1652	0/0:33,0:33:54.12:0,54,1952	0/0:22,0:21:42.09:0,42,1389
chr10	7397318	.	CCTTTCTTTTTTT	C	3890.01	PASS	AB=0.979;AC=15;AF=0.268;AN=56;BaseQRankSum=4.003;DP=752;FS=0.000;HRun=0;HaplotypeScore=343.1506;InbreedingCoeff=-0.3699;MQ=51.25;MQ0=6;MQRankSum=-7.327;QD=9.68;ReadPosRankSum=1.026;VQSLOD=1.5284;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:57:99:0,135,7874	0/1:11,0:11:99:235,0,702	0/0:31,0:17:42.12:0,42,1329	0/0:21,0:12:29.16:0,29,1330	0/1:33,1:34:67.10:67,0,904	0/1:32,0:32:94.65:95,0,1724	0/1:11,0:11:99:213,0,523	0/1:22,15:37:99:526,0,1856	0/1:34,0:34:99:433,0,1750	0/1:33,0:33:99:135,0,2510	0/1:21,0:21:99:217,0,2020	0/0:17,0:17:33.09:0,33,1164	0/0:26,0:26:69.22:0,69,3118	0/0:21,0:21:48.16:0,48,2569	0/1:33,0:33:99:256,0,3077	0/0:17,0:17:8.71:0,9,48	0/1:18,0:18:99:173,0,699	0/1:12,0:12:82.67:83,0,516	0/1:29,0:28:99:338,0,1157	0/1:38,0:38:99:525,0,1236	0/1:13,0:13:99:150,0,853	0/0:33,0:33:93.29:0,93,4434	0/0:25,0:25:57.20:0,57,2533	0/0:18,0:18:48.15:0,48,2193	0/1:46,0:46:99:444,0,2645	0/0:25,0:25:57.41:0,57,2931	0/0:35,0:35:78.27:0,78,3613	0/0:24,0:23:51.12:0,51,2105
chr10	7397323	.	C	CT	2167.30	PASS	AB=0.729;AC=7;AF=0.125;AN=56;BaseQRankSum=-0.852;DP=759;FS=2.580;HRun=7;HaplotypeScore=209.9095;InbreedingCoeff=-0.1484;MQ=50.55;MQ0=6;MQRankSum=-4.083;QD=10.47;ReadPosRankSum=-0.733;VQSLOD=0.3362;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:57:99:0,156,1485	0/0:11,0:12:29.92:0,30,274	0/0:31,0:14:10.58:0,11,202	0/0:24,0:12:10.59:0,11,275	0/0:34,0:34:27.02:0,27,255	0/1:20,11:31:99:338,0,411	0/1:5,5:10:46.53:157,0,47	0/0:38,0:40:74.93:0,75,654	0/1:23,10:33:99:342,0,415	0/0:32,0:32:71.26:0,71,610	0/0:17,0:20:53.26:0,53,468	0/0:17,0:17:24.04:0,24,231	0/0:25,0:25:63.10:0,63,608	0/0:21,0:21:48.08:0,48,463	0/0:34,0:34:99:0,102,929	0/0:18,0:18:11.40:0,11,67	0/1:10,9:19:55.85:217,0,56	0/0:13,0:13:25.68:0,26,239	0/1:17,11:27:99:346,0,282	0/1:30,9:39:99:295,0,511	0/0:13,0:14:32.99:0,33,300	0/0:34,0:34:90.13:0,90,869	0/0:24,0:24:47.97:0,48,463	0/0:19,0:19:42.06:0,42,405	0/1:29,18:47:99:603,0,432	0/0:21,0:22:62.94:0,63,593	0/0:36,0:36:78.12:0,78,753	0/0:25,0:24:42.07:0,42,406
chr10	7397344	.	TTTCC	T	6866.53	PASS	AB=0.949;AC=24;AF=0.429;AN=56;BaseQRankSum=-2.409;DP=777;FS=4.638;HRun=0;HaplotypeScore=233.6584;InbreedingCoeff=0.4373;MQ=50.86;MQ0=4;MQRankSum=9.050;QD=15.36;ReadPosRankSum=1.248;VQSLOD=4.4100;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:56:99:0,126,2895	0/0:12,0:12:27.05:0,27,575	0/0:20,0:9:15.05:0,15,269	0/0:24,0:11:15.05:0,15,285	0/0:27,0:27:30.48:0,30,677	0/1:33,0:33:77.83:78,0,338	0/1:15,0:15:85.06:85,0,117	0/0:40,0:39:63.22:0,63,1073	0/1:31,0:32:76.66:77,0,358	0/0:31,0:31:79.41:0,79,1561	0/0:28,0:28:67.14:0,67,1358	1/1:1,17:18:17.80:305,18,0	1/1:5,17:22:33.11:547,33,0	1/1:4,23:27:41.96:712,42,0	0/0:37,0:37:94.81:0,95,1792	0/0:20,0:20:29.96:0,30,456	0/1:22,0:22:99:113,0,161	0/0:19,0:19:32.16:0,32,646	0/1:29,0:27:5.24:5,0,229	0/1:37,0:37:82.43:82,0,333	0/0:16,0:16:22.85:0,23,556	1/1:6,32:38:87.21:1327,87,0	1/1:2,26:28:38.95:591,39,0	1/1:4,17:21:36.12:610,36,0	0/1:47,0:47:71.02:71,0,395	1/1:3,18:21:55.43:910,55,0	1/1:3,34:37:63.22:1069,63,0	0/1:6,14:19:7.78:284,0,8
chr10	7398507	.	C	CAACAAACAAACAAACA	20176.61	PASS	AB=0.652;AC=39;AF=0.696;AN=56;BaseQRankSum=-7.016;DP=790;FS=8.066;HRun=0;HaplotypeScore=319.7343;InbreedingCoeff=0.8505;MQ=62.59;MQ0=5;MQRankSum=-10.234;QD=36.68;ReadPosRankSum=-5.341;VQSLOD=2.2259;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:4.49:0,4,2585	1/1:5,0:12:15.05:554,15,0	0/0:27,0:21:12.04:0,12,474	0/0:31,0:28:18.05:0,18,298	1/1:11,0:28:27.05:815,27,0	1/1:7,7:21:18.06:1353,18,0	1/1:16,0:27:33.11:1817,33,0	1/1:21,0:32:66.23:2303,66,0	1/1:24,3:39:18.53:1166,19,0	1/1:19,0:34:45.14:1487,45,0	1/1:7,0:20:18.06:826,18,0	0/0:35,0:35:68.88:0,69,2698	0/0:11,0:30:18.36:0,18,476	0/0:9,0:25:31.79:0,32,355	1/1:23,0:39:21.07:902,21,0	1/1:15,0:36:42.14:1821,42,0	1/1:21,0:30:30.10:1526,30,0	1/1:10,0:12:15.05:590,15,0	1/1:20,0:26:33.34:1370,33,0	1/1:19,5:30:15.02:760,15,0	1/1:20,0:30:15.89:487,16,0	0/1:14,0:30:76.96:77,0,219	0/0:13,0:26:16.65:0,17,232	0/0:10,0:27:25.11:0,25,419	1/1:12,6:29:9.03:681,9,0	1/1:15,0:31:45.15:852,45,0	1/1:11,0:26:33.04:543,33,0	1/1:13,0:15:9.03:246,9,0
chr10	7398667	.	CAA	C	10325.54	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-0.489;DP=625;FS=13.376;HRun=13;HaplotypeScore=93.7330;InbreedingCoeff=0.9716;MQ=65.68;MQ0=3;MQRankSum=-0.570;QD=18.44;ReadPosRankSum=4.394;VQSLOD=2.5654;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:78.28:0,78,1041	1/1:5,9:14:24.03:233,24,0	0/0:25,0:21:40.66:0,41,511	0/0:13,0:12:14.32:0,14,153	1/1:3,31:34:80.74:769,81,0	1/1:2,18:20:45.05:436,45,0	1/1:5,20:27:47.73:498,48,0	1/1:8,25:33:46.02:633,46,0	1/1:4,19:23:39.01:378,39,0	1/1:5,19:25:47.95:515,48,0	1/1:4,19:24:50.70:476,51,0	1/1:5,16:21:48.04:466,48,0	1/1:3,13:16:14.76:273,15,0	1/1:3,25:28:69.08:669,69,0	1/1:5,16:22:18.11:399,18,0	1/1:5,22:28:47.95:515,48,0	1/1:1,11:12:15.41:221,15,0	1/1:1,5:6:15.01:145,15,0	1/1:5,11:17:26.91:306,27,0	1/1:3,23:28:53.38:489,53,0	1/1:4,12:16:24.02:233,24,0	1/1:2,21:23:54:524,54,0	1/1:6,26:33:62.60:643,63,0	1/1:3,13:17:26.96:311,27,0	1/1:1,17:18:51.07:495,51,0	1/1:3,2:27:60.87:295,61,0	1/1:7,0:29:52:225,52,0	1/1:0,0:16:41.16:178,41,0
chr10	7399870	.	TTCTC	T	20268.19	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-6.017;DP=631;FS=8.923;HRun=0;HaplotypeScore=119.3667;InbreedingCoeff=0.9042;MQ=79.86;MQ0=3;MQRankSum=-5.806;QD=36.92;ReadPosRankSum=7.874;VQSLOD=3.8395;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,33:36:72.25:1271,72,0	1/1:1,7:8:18.06:318,18,0	0/0:37,0:30:66.20:0,66,1389	0/0:44,0:35:78.04:0,78,1529	1/1:2,25:27:63.14:1047,63,0	1/1:5,14:19:36.12:636,36,0	1/1:0,12:12:24.08:424,24,0	1/1:10,26:35:43.94:1175,44,0	1/1:2,16:18:42.10:709,42,0	1/1:3,20:23:54.16:900,54,0	1/1:0,22:22:60.16:1026,60,0	1/1:2,5:7:18.06:318,18,0	1/1:3,14:17:26.96:477,27,0	1/1:2,19:21:42.06:676,42,0	1/1:3,14:17:36.12:636,36,0	1/1:3,7:10:18.06:318,18,0	1/1:2,21:23:47.01:845,47,0	1/1:1,5:6:3.01:53,3,0	1/1:6,24:30:69.21:1147,69,0	1/1:5,30:35:81.11:1299,81,0	1/1:2,26:28:63.17:1080,63,0	1/1:0,26:26:65.98:968,66,0	1/1:4,16:20:41.57:708,42,0	1/1:0,15:15:33.11:583,33,0	1/1:1,14:15:32.98:484,33,0	1/1:5,23:28:66.17:1085,66,0	1/1:4,32:36:84.24:1450,84,0	1/1:0,14:14:36.12:636,36,0
chr10	7400298	.	C	CGTCCCTCCCTTCCTCCCCCCTCCCT	81060.10	PASS	AB=0.994;AC=40;AF=0.714;AN=56;BaseQRankSum=8.034;DP=650;FS=1.336;HRun=0;HaplotypeScore=467.7104;InbreedingCoeff=-0.0463;MQ=59.91;MQ0=2;MQRankSum=-12.641;QD=140.00;ReadPosRankSum=11.001;VQSLOD=3.6423;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:30,3:33:50.62:3592,51,0	1/1:12,0:12:30.06:2032,30,0	0/0:28,0:20:60.07:0,60,1418	0/0:41,0:32:48.59:0,49,1045	0/1:36,0:36:36.52:4471,0,37	0/1:15,0:15:39.44:2192,0,39	1/1:16,0:16:20.15:2189,20,0	0/1:26,0:26:95.34:1875,0,95	0/1:21,0:21:11.78:3837,0,12	0/1:36,0:37:5.66:5585,0,6	1/1:26,0:26:27.68:4128,28,0	1/1:24,1:25:74.78:4314,75,0	1/1:20,0:20:53.88:2967,54,0	1/1:34,2:36:99:7522,108,0	1/1:26,0:26:24.24:4553,24,0	1/1:21,0:20:38.21:4167,38,0	0/1:14,0:14:58.87:1104,0,59	1/1:12,0:11:6.09:1687,6,0	0/1:16,0:16:50.68:1289,0,51	1/1:27,0:27:23.11:4019,23,0	0/1:8,0:8:26.95:250,0,27	1/1:22,1:23:56.99:3924,57,0	1/1:22,3:25:57.15:3285,57,0	1/1:19,0:19:39.03:1735,39,0	0/1:19,0:20:37.84:1984,0,38	0/1:26,0:26:17.92:3152,0,18	0/1:24,0:24:31.44:3049,0,31	0/1:15,0:15:77.85:2159,0,78
chr10	7400306	.	C	CCTTCCTCCCCCCTCCCTCTCCCTCT	92370.42	PASS	AB=1.000;AC=51;AF=0.911;AN=56;BaseQRankSum=-0.241;DP=657;FS=3.119;HRun=0;HaplotypeScore=454.6524;InbreedingCoeff=0.7595;MQ=60.80;MQ0=3;MQRankSum=-7.400;QD=158.99;ReadPosRankSum=5.318;VQSLOD=4.2175;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:36,0:36:52.09:3703,52,0	1/1:11,1:12:33.10:2359,33,0	0/0:31,0:22:53.46:0,53,1301	0/0:45,0:30:27.69:0,28,844	1/1:34,5:39:78.51:5282,79,0	0/1:16,0:16:36.25:2615,0,36	1/1:16,0:16:45.13:2416,45,0	1/1:23,0:23:69.16:2457,69,0	1/1:14,0:18:54.19:4475,54,0	1/1:39,1:40:99:6746,105,0	1/1:22,3:25:66.18:4755,66,0	1/1:23,0:23:60.17:4201,60,0	1/1:19,0:19:51.05:3038,51,0	1/1:36,0:36:99:7694,108,0	1/1:27,1:28:81.22:5328,81,0	1/1:19,2:20:63.20:4818,63,0	1/1:14,0:14:27.07:2005,27,0	1/1:13,1:13:28.36:1987,28,0	1/1:17,0:17:47.93:1741,48,0	1/1:20,0:25:69.15:4725,69,0	1/1:9,0:9:9.03:322,9,0	1/1:27,0:27:68.98:4036,69,0	1/1:25,0:25:54.13:3280,54,0	1/1:20,0:20:36.02:1832,36,0	1/1:17,0:18:48.15:2419,48,0	1/1:25,1:26:72.17:3896,72,0	1/1:21,1:22:63.16:3737,63,0	1/1:11,0:11:30.09:2507,30,0
chr10	7400356	.	GA	G	13242.40	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=1.504;DP=531;FS=0.915;HRun=7;HaplotypeScore=148.1677;InbreedingCoeff=0.9865;MQ=73.54;MQ0=0;MQRankSum=-6.672;QD=26.54;ReadPosRankSum=3.709;VQSLOD=2.9340;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,34:36:87.18:887,87,0	1/1:0,5:5:15.03:153,15,0	0/0:15,0:15:30.09:0,30,364	0/0:17,0:15:21.02:0,21,238	1/1:4,24:28:72.16:733,72,0	1/1:2,12:14:36.08:367,36,0	1/1:0,11:11:30.06:306,30,0	1/1:2,21:23:63.14:641,63,0	1/1:1,12:13:33.07:337,33,0	1/1:6,27:33:81.15:814,81,0	1/1:2,19:21:54.12:551,54,0	1/1:0,15:15:45.10:459,45,0	1/1:0,15:15:45.10:459,45,0	1/1:6,16:22:42.09:428,42,0	1/1:5,21:26:63.14:643,63,0	1/1:2,20:22:60.14:612,60,0	1/1:1,20:21:54.12:551,54,0	1/1:0,11:11:33.08:337,33,0	1/1:1,17:18:48.11:490,48,0	1/1:1,15:16:45.10:459,45,0	1/1:0,16:16:45.10:458,45,0	1/1:6,21:27:63.14:643,63,0	1/1:3,18:21:54.12:550,54,0	1/1:0,23:23:66.15:673,66,0	1/1:1,10:11:30.07:306,30,0	1/1:3,20:23:60.06:592,60,0	1/1:2,19:21:57.12:581,57,0	1/1:0,7:7:21.05:214,21,0
chr10	7400601	.	G	GT	5724.32	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-15.017;DP=602;FS=4.006;HRun=9;HaplotypeScore=78.6913;InbreedingCoeff=0.9434;MQ=79.05;MQ0=0;MQRankSum=-2.696;QD=25.11;ReadPosRankSum=-1.120;VQSLOD=5.1405;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,21:23:60.16:664,60,0	1/1:3,11:14:33.09:365,33,0	0/0:23,0:23:14.27:0,14,310	0/0:22,0:23:40.71:0,41,364	1/1:3,23:26:66.18:726,66,0	0/0:27,0:27:65.94:0,66,565	0/0:16,0:16:44.97:0,45,386	1/1:9,23:32:43.09:683,43,0	0/0:19,0:19:47.99:0,48,417	1/1:4,27:31:36.06:846,36,0	1/1:2,17:20:44.86:444,45,0	0/0:18,0:18:47.98:0,48,417	0/0:14,0:14:26.97:0,27,234	0/0:19,0:19:56.99:0,57,495	1/1:2,13:15:39.11:431,39,0	1/1:5,18:24:48.13:530,48,0	0/0:19,0:19:44.96:0,45,387	1/1:3,9:12:1.02:239,1,0	0/0:14,0:14:32.99:0,33,287	0/0:27,0:27:74.92:0,75,642	1/1:5,26:31:72.19:796,72,0	0/0:26,0:26:59.97:0,60,521	0/0:33,0:33:83.96:0,84,729	0/0:23,0:23:59.94:0,60,517	0/0:15,1:16:5.80:0,6,279	0/0:21,1:22:23.78:0,24,433	0/0:26,0:26:68.94:0,69,591	0/0:9,0:9:14.99:0,15,130
chr10	7405046	.	AAAGG	A	6034.81	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=14.391;DP=724;FS=3.228;HRun=0;HaplotypeScore=125.1496;InbreedingCoeff=0.9992;MQ=70.91;MQ0=1;MQRankSum=1.345;QD=30.48;ReadPosRankSum=4.066;VQSLOD=5.0335;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,34:41:78.27:1304,78,0	0/0:17,0:17:36.10:0,36,832	0/0:29,0:24:39.07:0,39,867	0/0:23,0:24:27.40:0,27,717	0/0:34,0:34:81.25:0,81,1886	0/0:28,0:28:69.24:0,69,1680	0/0:22,0:22:39.11:0,39,863	0/0:31,0:31:63.21:0,63,1436	0/0:24,0:24:63.17:0,63,1406	0/0:30,0:30:81.27:0,81,1919	0/0:19,0:19:39.13:0,39,964	1/1:5,12:17:23.87:401,24,0	1/1:6,16:22:36.12:601,36,0	1/1:1,21:22:60.14:971,60,0	0/0:28,0:28:75.19:0,75,1667	0/0:25,0:25:60.19:0,60,1420	0/0:32,0:32:59.43:0,59,1739	0/0:21,0:21:60.19:0,60,1424	0/0:22,0:22:48.16:0,48,1166	0/0:25,0:25:63.22:0,63,1557	0/0:27,0:27:75.26:0,75,1843	1/1:5,25:30:57.03:858,57,0	1/1:7,23:30:48.16:797,48,0	1/1:7,29:36:66.23:1103,66,0	0/0:21,0:21:48.16:0,48,1175	0/0:30,0:30:78.27:0,78,1885	0/0:27,0:27:75.26:0,75,1849	0/0:10,0:10:27.09:0,27,668
chr10	7406348	.	AGAGAGAGAGAGAGAGAGAGG	A	1343.29	PASS	AB=1.000;AC=26;AF=0.481;AN=54;BaseQRankSum=-7.147;DP=483;FS=5.144;HRun=0;HaplotypeScore=190.3375;InbreedingCoeff=0.2581;MQ=50.76;MQ0=32;MQRankSum=-0.445;QD=4.71;ReadPosRankSum=-1.996;VQSLOD=2.3406;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:20.76:0,21,1168	1/1:11,0:11:9.02:106,9,0	./.	0/0:31,0:8:2.13:0,2,4	0/1:16,0:16:11.50:38,0,12	0/1:14,0:14:12.71:13,0,256	0/0:19,0:18:17.06:0,17,459	1/1:22,0:18:11.59:48,12,0	0/0:25,0:24:39.13:0,39,1428	1/1:15,0:14:22.22:224,22,0	1/1:9,0:7:12.01:137,12,0	0/1:18,0:17:40.44:40,0,308	0/0:12,0:11:8.24:0,8,140	0/0:13,0:12:6.10:0,6,275	1/1:16,0:16:29.89:271,30,0	1/1:5,17:22:3.01:162,3,0	0/1:7,0:6:10.39:10,0,283	1/1:12,0:11:3.01:103,3,0	0/0:13,0:13:10.38:0,10,433	0/0:20,0:19:9.03:0,9,187	1/1:35,0:35:28.05:249,28,0	0/1:16,0:16:16.55:17,0,117	0/1:25,0:25:35.90:36,0,133	1/1:12,0:11:2.68:11,3,0	0/0:14,0:11:20.39:0,20,504	0/1:16,0:16:32.49:32,0,206	0/1:19,0:18:26.07:26,0,356	0/0:9,0:4:9:0,9,132
chr10	7406350	.	AGAGAGAGAGAGAGAGAGG	A	1927.49	PASS	AB=1.000;AC=31;AF=0.574;AN=54;BaseQRankSum=-8.129;DP=480;FS=6.986;HRun=0;HaplotypeScore=172.4644;InbreedingCoeff=0.0380;MQ=47.97;MQ0=32;MQRankSum=1.845;QD=5.62;ReadPosRankSum=-3.484;VQSLOD=1.3668;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:20.53:0,21,973	1/1:13,0:13:14.17:102,14,0	./.	0/0:30,0:4:1.36:0,1,2	1/1:16,0:16:12.45:98,12,0	0/1:14,0:14:13.29:13,0,181	0/1:20,0:19:32.05:32,0,311	1/1:19,0:15:12.86:56,13,0	0/0:23,0:22:40.37:0,40,1088	1/1:17,0:16:29.41:259,29,0	1/1:12,0:10:20.92:168,21,0	0/1:18,0:17:81.75:82,0,213	0/1:12,0:11:33.87:34,0,79	0/0:12,0:11:9.83:0,10,233	1/1:15,0:15:28.96:201,29,0	1/1:20,0:20:3.01:129,3,0	0/1:7,0:6:10.39:10,0,218	1/1:3,7:9:3.01:148,3,0	0/1:13,0:13:13.82:14,0,295	0/0:22,0:21:8.92:0,9,125	1/1:35,0:35:44.06:449,44,0	0/1:16,0:16:16.55:17,0,99	0/1:25,0:25:57.85:58,0,104	1/1:12,0:11:3.01:44,3,0	0/1:14,0:11:30.37:30,0,328	0/1:16,0:16:44.38:84,0,44	0/1:19,0:18:71.70:72,0,138	0/0:9,0:4:5.46:0,5,60
chr10	7406362	.	AGAGAGG	A	5522.46	PASS	AB=1.000;AC=50;AF=0.893;AN=56;BaseQRankSum=-3.301;DP=504;FS=1.251;HRun=0;HaplotypeScore=102.4081;InbreedingCoeff=0.0935;MQ=50.81;MQ0=32;MQRankSum=1.218;QD=11.34;ReadPosRankSum=1.046;VQSLOD=3.7939;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:32,0:32:75.48:227,0,75	1/1:11,0:11:14.90:114,15,0	0/0:17,0:1:2.94:0,3,18	0/1:31,0:6:18.81:19,0,20	1/1:17,0:17:26.94:218,27,0	1/1:12,0:12:16.67:148,17,0	1/1:19,0:18:32.65:307,33,0	1/1:16,0:12:18.21:114,18,0	1/1:20,2:21:41.64:501,42,0	1/1:20,0:19:41.68:356,42,0	1/1:17,0:15:32.90:265,33,0	1/1:22,0:21:9.32:186,9,0	1/1:11,0:11:13.33:92,13,0	0/1:16,0:15:29.30:129,0,29	1/1:20,0:20:47.67:364,48,0	1/1:19,0:19:3.01:45,3,0	1/1:7,0:6:13.42:99,13,0	1/1:10,0:9:3.01:46,3,0	1/1:13,0:13:33.08:270,33,0	1/1:2,22:23:11.91:97,12,0	1/1:36,0:36:62.82:519,63,0	1/1:16,0:16:2.67:60,3,0	0/1:23,0:23:0.49:127,0,0	1/1:9,0:8:8.91:62,9,0	1/1:14,0:12:24:228,24,0	1/1:17,0:17:46.50:400,47,0	1/1:21,0:20:50.70:388,51,0	1/1:12,0:7:17.94:143,18,0
chr10	7406366	.	AGG	A	5954.44	PASS	AB=0.974;AC=53;AF=0.946;AN=56;BaseQRankSum=-3.949;DP=507;FS=1.275;HRun=3;HaplotypeScore=80.2535;InbreedingCoeff=-0.0248;MQ=51.32;MQ0=32;MQRankSum=2.315;QD=11.74;ReadPosRankSum=2.149;VQSLOD=1.7793;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:34,0:34:32.64:349,33,0	1/1:10,0:10:17.90:139,18,0	0/1:20,0:3:10.02:12,0,10	0/1:29,0:6:18.93:19,0,20	1/1:18,0:18:32.93:268,33,0	1/1:13,0:13:19.69:173,20,0	1/1:17,0:16:35.95:304,36,0	1/1:12,0:8:16.21:128,16,0	1/1:22,0:21:44.55:384,45,0	1/1:14,4:17:43.16:371,43,0	1/1:15,0:13:32.90:265,33,0	0/1:24,0:23:6.96:216,0,7	1/1:11,0:11:17.52:123,18,0	1/1:16,0:15:17.75:151,18,0	1/1:21,0:21:53.66:414,54,0	1/1:18,0:18:2.92:17,3,0	1/1:7,0:6:13.35:78,13,0	1/1:9,0:8:2.94:18,3,0	1/1:11,0:11:30:270,30,0	1/1:23,0:22:11.85:79,12,0	1/1:34,0:34:62.59:519,63,0	1/1:20,0:20:11.55:131,12,0	1/1:27,0:26:10.19:201,10,0	1/1:10,0:9:14.78:98,15,0	1/1:16,0:14:29.97:253,30,0	1/1:17,0:17:47.95:424,48,0	1/1:20,0:19:50.72:389,51,0	1/1:13,0:8:19.53:164,20,0
chr10	7406998	.	CT	C	2159.27	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=11.150;DP=530;FS=3.834;HRun=9;HaplotypeScore=49.6105;InbreedingCoeff=0.8372;MQ=73.11;MQ0=0;MQRankSum=-0.427;QD=17.99;ReadPosRankSum=1.302;VQSLOD=3.6773;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:41.89:0,42,723	0/0:2,0:2:6.02:0,6,69	0/0:12,0:12:26.98:0,27,281	0/1:13,0:13:15.13:15,0,143	0/0:23,0:23:66.16:0,66,730	0/0:25,0:25:69.20:0,69,787	0/0:14,0:14:39.10:0,39,441	0/0:27,1:28:38.72:0,39,691	0/0:23,0:23:69.20:0,69,796	0/0:22,0:22:57.16:0,57,650	0/0:24,0:24:66.17:0,66,743	1/1:0,10:10:27.01:247,27,0	1/1:2,13:15:33.02:302,33,0	1/1:2,21:23:54.03:494,54,0	0/0:15,0:15:36.11:0,36,415	0/0:15,0:15:42.12:0,42,476	0/0:30,0:30:81.22:0,81,915	0/0:7,0:7:21.06:0,21,242	0/0:23,0:23:57.15:0,57,637	0/0:26,1:27:47.76:0,48,803	0/0:16,0:17:42.12:0,42,485	1/1:1,17:18:45.02:412,45,0	1/1:3,23:26:66.03:604,66,0	1/1:2,13:15:1.39:267,1,0	0/0:21,0:21:60.17:0,60,685	0/0:23,0:23:54.16:0,54,623	0/0:21,0:21:57.11:0,57,634	0/0:12,0:12:33.10:0,33,381
chr10	7407963	.	AG	A	1094.10	PASS	AB=0.646;AC=13;AF=0.260;AN=50;BaseQRankSum=5.586;DP=1207;FS=3.321;HRun=2;HaplotypeScore=41.0743;InbreedingCoeff=0.7975;MQ=16.48;MQ0=657;MQRankSum=-1.435;QD=3.84;ReadPosRankSum=3.763;VQSLOD=0.7436;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:70,10:8:12.04:155,12,0	0/0:29,0:17:48.09:0,48,689	./.	./.	0/0:33,0:20:32.72:0,33,436	0/0:40,0:17:36.05:0,36,497	0/0:39,0:7:15.05:0,15,224	0/0:49,0:3:5.98:0,6,65	0/0:48,0:20:38.95:0,39,557	0/0:73,0:31:90.18:0,90,1286	0/0:32,0:20:30.05:0,30,421	1/1:16,11:8:11.25:124,11,0	1/1:15,19:12:12.04:155,12,0	0/1:14,17:12:23.65:212,0,24	0/0:34,0:14:27.09:0,27,403	0/0:32,0:11:33.11:0,33,492	0/0:118,0:8:11.93:0,12,150	0/0:70,0:4:6:0,6,68	0/0:61,0:6:15.05:0,15,224	0/0:44,0:29:80.98:0,81,1100	./.	1/1:8,29:19:15.05:194,15,0	1/1:9,19:13:27.09:349,27,0	1/1:45,3:2:6.02:77,6,0	0/0:24,0:14:26.98:0,27,351	0/0:52,0:17:48.16:0,48,717	0/0:43,0:26:60.20:0,60,879	0/0:32,0:8:18.06:0,18,253
chr10	7412035	.	CA	C	5107.68	PASS	AB=0.596;AC=17;AF=0.315;AN=54;BaseQRankSum=10.265;DP=728;FS=0.000;HRun=4;HaplotypeScore=57.4612;InbreedingCoeff=0.8787;MQ=45.26;MQ0=39;MQRankSum=-1.450;QD=23.65;ReadPosRankSum=-1.594;VQSLOD=3.3480;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:40:75.21:0,75,1022	1/1:0,5:5:15.05:180,15,0	0/0:28,0:4:12.04:0,12,151	./.	1/1:1,32:31:87.27:1043,87,0	0/0:27,0:27:63.21:0,63,880	0/0:12,0:6:6.02:0,6,76	1/1:2,6:3:8.99:88,9,0	0/0:29,0:27:45.12:0,45,608	1/1:3,32:29:78.22:922,78,0	1/1:2,33:32:72.22:855,72,0	0/0:12,0:12:24.08:0,24,336	0/0:16,0:16:27.05:0,27,356	0/0:22,0:22:57.19:0,57,786	1/1:1,16:13:30.09:360,30,0	1/1:1,20:19:45.14:537,45,0	0/0:37,0:30:60.17:0,60,806	0/1:9,19:23:22.55:552,0,23	0/0:17,0:6:18.06:0,18,252	0/0:27,0:25:72.24:0,72,1001	1/1:8,26:26:48.15:570,48,0	0/0:27,0:27:57.04:0,57,776	0/0:33,0:32:75.25:0,75,1050	0/0:23,0:20:30.06:0,30,398	0/0:25,0:25:75.25:0,75,1049	0/0:37,0:32:87.27:0,87,1200	0/0:39,0:37:75.23:0,75,1013	0/0:31,0:30:81.27:0,81,1134
chr10	7415655	.	AGC	A	1387.13	PASS	AB=0.859;AC=11;AF=0.262;AN=42;BaseQRankSum=4.914;DP=730;DS;FS=5.163;HRun=0;HaplotypeScore=74.5631;InbreedingCoeff=0.0101;MQ=44.18;MQ0=478;MQRankSum=-3.749;QD=5.01;ReadPosRankSum=3.093;VQSLOD=1.9053;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:66,5:8:7.81:203,0,8	0/1:3,1:4:19.87:38,0,20	0/0:31,0:16:31.96:0,32,660	0/0:41,0:21:63.02:0,63,911	0/0:11,0:10:14.99:0,15,128	0/0:6,0:2:2.94:0,3,18	./.	./.	1/1:16,4:5:6.81:169,7,0	0/0:28,0:2:6.01:0,6,55	0/0:8,0:8:11.99:0,12,101	./.	./.	./.	./.	1/1:17,0:3:6.01:60,6,0	0/1:36,0:9:49.80:124,0,50	0/0:33,0:3:6.02:0,6,89	./.	0/0:12,0:12:18:0,18,155	0/0:45,0:2:3.01:0,3,35	0/1:5,6:10:50.53:238,0,51	0/1:10,6:15:64.34:317,0,64	0/1:29,1:11:10.60:223,0,11	0/0:6,0:6:3:0,3,26	0/1:67,5:25:99:149,0,984	0/0:83,0:29:81.28:0,81,1507	0/0:18,0:13:39.13:0,39,729
chr10	7415657	.	C	CGCTGAGTGCCT	4162.29	PASS	AB=0.716;AC=12;AF=0.286;AN=42;BaseQRankSum=-6.750;DP=850;DS;FS=73.130;HRun=0;HaplotypeScore=102.8386;InbreedingCoeff=0.2014;MQ=41.01;MQ0=594;MQRankSum=-5.269;QD=23.92;ReadPosRankSum=1.422;VQSLOD=-0.5256;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:74,1:8:99:154,0,366	0/1:2,2:4:70.86:166,0,71	0/0:31,0:16:48.12:0,48,1134	0/0:41,0:21:30.54:0,31,1552	0/1:4,8:12:1.95:674,0,2	0/0:12,0:2:3.01:0,3,40	./.	./.	0/0:36,0:5:15.04:0,15,333	1/1:17,1:3:8.99:318,9,0	0/1:3,6:9:61.57:505,0,62	./.	./.	./.	./.	0/0:29,0:3:6.02:0,6,153	0/0:47,0:9:21.07:0,21,562	0/0:38,0:3:5.99:0,6,128	./.	1/1:5,8:12:18.06:1033,18,0	0/0:43,0:2:3.01:0,3,102	0/1:10,4:11:99:490,0,434	0/1:11,5:15:99:649,0,650	0/0:31,0:11:27.09:0,27,708	1/1:2,3:6:3.01:172,3,0	0/0:68,0:25:72.25:0,72,2375	0/0:61,0:29:81.28:0,81,2887	0/0:16,0:13:39.13:0,39,1391
chr10	7415658	.	GCA	G	1126.57	PASS	AB=0.944;AC=11;AF=0.262;AN=42;BaseQRankSum=4.890;DP=1044;DS;FS=5.300;HRun=0;HaplotypeScore=76.3754;InbreedingCoeff=-0.0125;MQ=36.90;MQ0=795;MQRankSum=-2.967;QD=2.74;ReadPosRankSum=3.785;VQSLOD=1.2061;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:97,0:8:12.75:102,0,13	0/1:5,0:3:18.19:18,0,25	0/0:31,0:16:47.19:0,47,851	0/0:41,0:21:63.14:0,63,1114	0/0:12,0:11:15.03:0,15,155	0/0:21,0:2:2.94:0,3,18	./.	./.	1/1:59,0:5:7.74:88,8,0	0/0:17,0:2:6:0,6,54	0/0:11,0:8:12.03:0,12,132	./.	./.	./.	./.	1/1:43,2:3:6.02:97,6,0	0/1:48,5:9:65.17:222,0,65	0/0:44,0:3:6.02:0,6,90	./.	0/0:14,0:11:18.04:0,18,184	0/0:43,0:2:3.01:0,3,50	0/1:15,0:11:64.81:120,0,65	0/1:16,3:15:83.47:245,0,83	0/1:28,7:11:23.14:336,0,23	0/0:6,0:5:3.01:0,3,31	0/1:82,0:24:29.92:30,0,1063	0/0:60,0:29:81.28:0,81,1637	0/0:19,0:14:39.13:0,39,791
chr10	7419852	.	TA	T	1392.84	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=1.644;DP=228;FS=11.773;HRun=6;HaplotypeScore=64.6797;InbreedingCoeff=0.7771;MQ=67.91;MQ0=1;MQRankSum=-5.753;QD=24.44;ReadPosRankSum=-2.249;VQSLOD=2.0047;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:52.98:0,53,666	1/1:1,3:4:9.02:97,9,0	0/0:12,0:7:5.45:0,5,45	0/0:20,0:10:0.56:0,1,96	1/1:0,6:6:18.05:193,18,0	0/0:7,0:7:21.03:0,21,255	0/0:3,0:3:6.02:0,6,79	1/1:4,10:13:33.06:345,33,0	0/0:6,0:6:18.06:0,18,236	1/1:0,3:3:9.02:97,9,0	1/1:0,11:11:33.04:341,33,0	0/0:2,0:2:3.01:0,3,39	0/0:5,0:5:8.96:0,9,96	0/0:4,0:4:12.04:0,12,158	1/1:2,2:4:9.02:96,9,0	1/1:1,7:8:21.05:225,21,0	0/0:16,0:16:45.13:0,45,569	1/1:1,4:5:15.04:161,15,0	0/0:16,0:15:42.10:0,42,518	0/0:14,0:14:42.12:0,42,531	1/1:0,2:2:3.01:32,3,0	0/0:1,0:1:2.94:0,3,18	0/0:2,0:2:6.02:0,6,79	0/0:4,0:4:8.10:0,8,117	0/0:7,0:7:18.06:0,18,237	0/0:10,0:10:30.10:0,30,394	0/0:9,0:9:27.09:0,27,355	0/0:12,0:12:30.10:0,30,394
chr10	7419869	.	AAC	A	2258.95	PASS	AB=0.988;AC=50;AF=0.893;AN=56;BaseQRankSum=-3.083;DP=263;FS=26.407;HRun=0;HaplotypeScore=76.6841;InbreedingCoeff=0.2218;MQ=56.57;MQ0=5;MQRankSum=-2.390;QD=9.65;ReadPosRankSum=0.590;VQSLOD=1.0951;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:22:46.04:56,0,46	1/1:3,0:3:8.86:73,9,0	0/1:18,1:7:4.45:4,0,7	0/0:29,0:10:20.62:0,21,241	1/1:9,0:8:23.42:141,23,0	1/1:7,0:7:16.20:57,16,0	1/1:4,0:4:6.66:20,7,0	1/1:16,2:16:23.76:232,24,0	1/1:4,0:4:8.88:29,9,0	0/1:4,0:4:41.02:43,0,41	1/1:10,0:10:29.18:167,29,0	1/1:3,0:3:8.85:57,9,0	1/1:4,0:4:6.41:45,6,0	1/1:4,0:4:11.78:89,12,0	1/1:5,0:5:14.70:96,15,0	1/1:8,1:9:26.61:229,27,0	1/1:18,0:18:34.46:128,34,0	1/1:5,0:5:11.87:95,12,0	1/1:18,0:15:14.04:107,14,0	0/1:14,0:14:8.40:84,0,8	1/1:3,0:3:8.86:57,9,0	1/1:2,0:2:5.87:36,6,0	1/1:2,0:2:5.88:36,6,0	1/1:4,0:4:11.18:104,11,0	1/1:8,1:9:21.42:89,21,0	1/1:10,0:10:22.99:106,23,0	1/1:9,1:10:22.99:109,23,0	1/1:14,0:14:31.08:101,31,0
chr10	7419870	.	AC	A	6908.19	PASS	AB=0.786;AC=52;AF=0.929;AN=56;BaseQRankSum=-2.784;DP=260;FS=34.337;HRun=1;HaplotypeScore=56.5256;InbreedingCoeff=0.3342;MQ=58.70;MQ0=6;MQRankSum=-1.441;QD=30.17;ReadPosRankSum=2.703;VQSLOD=2.8692;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:21,1:22:53.65:316,54,0	1/1:0,3:3:9.03:123,9,0	0/1:20,0:8:12.12:12,0,48	0/0:30,1:11:23.17:0,23,224	1/1:1,8:8:24.07:316,24,0	1/1:2,5:7:21.07:291,21,0	1/1:0,4:4:9.03:124,9,0	1/1:3,12:13:24.05:285,24,0	1/1:0,4:4:12.04:167,12,0	0/1:1,3:4:29.34:112,0,29	1/1:0,10:10:30.10:414,30,0	1/1:0,3:3:8.99:102,9,0	1/1:0,3:3:8.98:102,9,0	1/1:2,2:4:12:143,12,0	1/1:1,4:5:15.04:191,15,0	1/1:1,8:9:27.07:354,27,0	1/1:5,13:18:51.07:650,51,0	1/1:1,3:4:12.04:163,12,0	1/1:7,10:14:41.67:501,42,0	1/1:5,8:13:31.15:428,31,0	1/1:1,2:3:8.98:102,9,0	1/1:0,2:2:6.02:82,6,0	1/1:0,2:2:6.02:82,6,0	1/1:3,1:4:11.96:119,12,0	1/1:1,8:9:27.08:361,27,0	1/1:2,9:11:29.89:390,30,0	1/1:1,9:10:30.01:394,30,0	1/1:0,14:14:42.14:586,42,0
chr10	7419901	.	C	CA	2905.57	PASS	AB=0.708;AC=45;AF=0.804;AN=56;BaseQRankSum=-0.942;DP=296;FS=0.000;HRun=10;HaplotypeScore=69.0026;InbreedingCoeff=0.4812;MQ=59.79;MQ0=7;MQRankSum=-4.680;QD=12.80;ReadPosRankSum=-0.649;VQSLOD=3.3055;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:8,12:20:11.55:255,0,12	1/1:3,0:3:8.04:34,8,0	0/0:18,0:6:2.64:0,3,24	0/0:23,0:9:14.15:0,14,103	1/1:10,0:9:8.51:35,9,0	1/1:2,6:8:15.01:148,15,0	0/1:2,5:7:6.28:134,0,6	1/1:21,0:20:31.78:138,32,0	1/1:4,3:7:12.02:121,12,0	1/1:6,0:5:5.96:29,6,0	1/1:15,0:15:22.34:106,22,0	1/1:3,2:5:3.01:32,3,0	1/1:1,3:4:6.02:64,6,0	1/1:2,3:5:3.01:32,3,0	1/1:10,0:10:14.28:58,14,0	1/1:4,0:4:10.71:45,11,0	1/1:4,15:19:39.09:409,39,0	1/1:6,0:6:13.39:56,13,0	1/1:5,15:19:53.93:539,54,0	1/1:3,9:12:23.98:231,24,0	1/1:8,0:7:10.71:45,11,0	1/1:0,3:3:9.02:96,9,0	1/1:1,4:5:11.99:116,12,0	1/1:1,7:8:14.77:140,15,0	1/1:4,5:9:20.87:193,21,0	0/1:10,1:10:14:14,0,105	0/0:13,0:13:38.92:0,39,315	0/0:15,0:15:41.95:0,42,345
chr10	7419903	.	A	AAC	2752.46	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-1.946;DP=305;FS=11.944;HRun=0;HaplotypeScore=74.4187;InbreedingCoeff=0.8728;MQ=59.48;MQ0=9;MQRankSum=-3.396;QD=31.28;ReadPosRankSum=-0.467;VQSLOD=4.8219;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:21:47.18:0,47,311	1/1:0,3:3:9.03:155,9,0	0/0:18,0:6:3.47:0,3,30	0/0:23,0:9:18.93:0,19,209	1/1:3,7:9:26.42:274,26,0	0/0:7,0:7:13.08:0,13,64	0/0:7,0:7:14.54:0,15,80	1/1:8,15:22:45.14:731,45,0	0/0:8,0:8:17.27:0,17,111	1/1:2,4:5:15.05:226,15,0	1/1:2,13:15:42.02:602,42,0	0/0:5,0:5:11.51:0,12,71	0/0:4,0:4:7.36:0,7,27	0/0:6,0:6:8.54:0,9,51	1/1:0,10:10:18.06:297,18,0	1/1:0,4:4:12.04:206,12,0	0/0:19,0:19:40.54:0,41,195	1/1:1,5:7:15.04:259,15,0	0/0:20,0:19:20.69:0,21,153	0/0:12,0:11:24.21:0,24,124	1/1:1,8:9:12.04:207,12,0	0/0:3,0:3:7.49:0,7,28	0/0:5,0:5:7.69:0,8,29	0/0:8,0:8:11.63:0,12,42	0/0:10,0:10:7.57:0,8,90	0/0:12,0:11:26.56:0,27,322	0/0:13,0:13:39.13:0,39,591	0/0:14,0:14:42.14:0,42,642
chr10	7421505	.	TTCTCTCTCTC	T	291.51	PASS	AB=0.932;AC=8;AF=0.143;AN=56;BaseQRankSum=4.427;DP=606;FS=3.516;HRun=0;HaplotypeScore=175.4516;InbreedingCoeff=0.4600;MQ=72.26;MQ0=25;MQRankSum=1.283;QD=3.10;ReadPosRankSum=-1.076;VQSLOD=2.6167;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:33.11:0,33,1391	0/0:15,0:15:21.06:0,21,765	0/0:37,0:20:5.99:0,6,147	0/0:48,0:27:10.94:0,11,225	0/0:20,0:20:15.04:0,15,434	0/0:12,8:20:5.63:0,6,98	0/1:16,0:16:99:163,0,123	0/0:42,0:40:31.65:0,32,899	0/1:25,0:27:19.54:20,0,68	0/0:22,0:22:42.13:0,42,1341	0/0:8,0:8:12.04:0,12,388	0/0:16,0:16:11.40:0,11,97	0/0:24,0:23:10.17:0,10,198	0/0:12,0:12:23.86:0,24,251	0/0:22,0:22:33.10:0,33,1279	0/0:24,0:24:30.09:0,30,1184	1/1:18,0:18:8.94:126,9,0	0/0:9,0:9:15.05:0,15,609	1/1:19,0:19:7.57:68,8,0	0/0:16,0:17:6.01:0,6,61	0/0:33,0:28:42.14:0,42,1576	0/0:18,0:18:18:0,18,211	0/0:28,0:28:15.04:0,15,310	0/0:20,0:21:7.68:0,8,185	1/1:11,0:11:3.01:48,3,0	0/0:12,0:12:15.04:0,15,525	0/0:24,0:24:27.08:0,27,985	0/0:4,0:2:5.38:0,5,97
chr10	7421537	.	CTCTCTCTGTGTGTGTG	C	3575.31	PASS	AB=0.895;AC=26;AF=0.464;AN=56;BaseQRankSum=1.253;DP=546;FS=1.661;HRun=0;HaplotypeScore=191.2201;InbreedingCoeff=0.4478;MQ=47.35;MQ0=33;MQRankSum=3.788;QD=10.61;ReadPosRankSum=0.693;VQSLOD=2.8506;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:43,0:40:99:203,0,930	0/0:12,0:12:21.54:0,22,612	0/0:5,0:1:3.01:0,3,75	0/0:14,0:6:0.85:0,1,60	0/0:15,0:14:15.03:0,15,342	1/1:22,0:21:11.78:205,12,0	1/1:27,0:22:25.41:436,25,0	0/0:28,0:27:60.03:0,60,886	1/1:19,0:19:7.21:341,7,0	0/0:18,0:18:38.63:0,39,974	0/0:10,0:10:9.02:0,9,286	1/1:16,0:16:5.95:148,6,0	1/1:19,0:18:38.43:602,38,0	1/1:18,0:17:19.78:158,20,0	0/0:22,0:22:6.11:0,6,964	0/0:20,0:19:13.81:0,14,883	1/1:12,12:21:5.03:196,5,0	0/0:10,0:8:21.06:0,21,615	0/1:8,4:11:1.31:232,0,1	1/1:4,13:17:0.37:1,0,0	0/0:35,0:30:56.82:0,57,1261	0/1:15,0:15:1.68:130,0,2	0/1:11,0:28:26.21:26,0,82	1/1:31,0:30:30.31:327,30,0	1/1:3,0:16:3.01:48,3,0	0/1:20,0:20:99:346,0,459	0/0:19,0:19:25.64:0,26,641	0/1:10,0:6:56.59:176,0,57
chr10	7421539	.	CTCTCTGTGTGTGTGTG	C	3560.32	PASS	AB=1.000;AC=28;AF=0.500;AN=56;BaseQRankSum=-0.658;DP=539;FS=3.931;HRun=0;HaplotypeScore=188.8466;InbreedingCoeff=0.5167;MQ=46.18;MQ0=31;MQRankSum=3.369;QD=10.66;ReadPosRankSum=0.992;VQSLOD=2.7688;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:45,0:42:99:192,0,716	0/0:12,0:12:21.07:0,21,493	0/0:5,0:1:3.01:0,3,49	0/0:12,0:3:0.66:0,1,36	0/0:15,0:14:12:0,12,279	1/1:20,0:19:11.54:110,12,0	1/1:25,0:21:23.15:275,23,0	0/0:27,0:26:65.86:0,66,943	1/1:19,0:19:19.75:219,20,0	0/0:18,0:18:48.02:0,48,789	0/0:10,0:10:9.03:0,9,289	1/1:3,12:16:5.95:184,6,0	1/1:19,0:19:39.50:826,39,0	1/1:18,0:17:23.51:303,24,0	0/0:23,0:23:49.27:0,49,818	0/0:20,0:19:38.53:0,39,840	1/1:24,0:21:0.71:153,1,0	0/0:10,0:8:21.07:0,21,556	0/1:12,0:11:51.51:133,0,52	1/1:17,0:17:0.40:1,0,0	0/0:34,0:29:54.16:0,54,1122	1/1:15,0:15:19.45:279,19,0	1/1:27,0:27:2.92:65,3,0	1/1:31,0:30:30.10:486,30,0	1/1:16,0:16:3:26,3,0	0/1:20,0:20:99:202,0,455	0/0:19,0:19:24.95:0,25,448	0/1:10,0:6:54.70:107,0,55
chr10	7421543	.	CTGTGTGTGTGTG	C	1499.05	PASS	AB=0.921;AC=23;AF=0.479;AN=48;BaseQRankSum=2.925;DP=528;FS=23.551;HRun=0;HaplotypeScore=170.6195;InbreedingCoeff=0.3281;MQ=46.30;MQ0=29;MQRankSum=0.160;QD=5.08;ReadPosRankSum=-0.352;VQSLOD=1.1192;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:41,2:41:44.43:293,0,44	0/0:11,0:11:9:0,9,194	./.	./.	0/0:12,0:11:6.02:0,6,139	1/1:21,0:20:15.01:139,15,0	0/0:17,0:21:3.40:0,3,20	0/0:27,0:26:41.80:0,42,637	0/1:12,1:18:3.56:57,0,4	0/0:17,0:18:20.74:0,21,339	0/0:9,0:9:6.02:0,6,188	1/1:16,0:16:5.65:99,6,0	1/1:10,7:19:15.29:485,15,0	1/1:14,2:16:1.13:2,1,0	0/0:22,0:23:28.17:0,28,337	0/0:21,0:20:29.27:0,29,429	1/1:23,0:21:1.22:74,1,0	0/0:11,0:9:15.05:0,15,343	0/1:14,0:13:49.88:50,0,113	1/1:16,0:17:0.45:1,0,0	0/0:34,0:29:14.62:0,15,480	1/1:5,12:17:4.40:58,4,0	1/1:21,1:24:2.83:18,3,0	1/1:22,9:30:2.48:41,2,0	./.	0/1:20,0:22:99:229,0,236	./.	0/1:11,0:7:27.62:108,0,28
chr10	7424973	.	AT	A	4683.53	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=14.114;DP=630;FS=8.409;HRun=9;HaplotypeScore=72.9944;InbreedingCoeff=0.9960;MQ=79.80;MQ0=0;MQRankSum=-2.134;QD=22.30;ReadPosRankSum=0.041;VQSLOD=5.3775;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:62,0:62:99:0,177,2004	1/1:0,9:9:27.01:247,27,0	0/0:24,0:23:57.05:0,57,614	0/0:17,0:17:38.77:0,39,412	1/1:1,18:19:45.01:412,45,0	0/0:20,0:20:60.16:0,60,675	0/0:20,0:20:57.17:0,57,658	1/1:3,31:34:93.03:846,93,0	0/0:15,0:15:42.12:0,42,485	1/1:4,23:27:65.39:584,65,0	1/1:3,13:16:36.01:329,36,0	0/0:28,0:28:81.22:0,81,924	0/0:19,0:19:51.14:0,51,579	0/0:17,0:17:42.12:0,42,484	1/1:2,19:21:54.02:494,54,0	1/1:3,24:27:34.42:569,34,0	0/0:22,0:22:63.19:0,63,727	1/1:4,18:22:16.40:405,16,0	0/0:16,0:16:42.11:0,42,468	0/0:21,0:21:54.16:0,54,622	1/1:3,32:35:87.04:796,87,0	0/0:25,0:25:72.20:0,72,817	0/0:16,0:16:42.08:0,42,470	0/0:23,0:23:60.16:0,60,680	0/0:23,0:23:69.18:0,69,772	0/0:19,1:20:20.67:0,21,490	0/0:26,0:26:60.17:0,60,683	0/0:6,0:6:18.05:0,18,208
chr10	7426271	.	AT	A	1363.04	PASS	AB=0.929;AC=7;AF=0.125;AN=56;BaseQRankSum=3.037;DP=709;FS=1.036;HRun=8;HaplotypeScore=105.8111;InbreedingCoeff=0.8559;MQ=83.78;MQ0=0;MQRankSum=0.213;QD=18.42;ReadPosRankSum=-0.877;VQSLOD=2.8123;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,111,1303	0/0:11,0:11:33.10:0,33,398	0/0:23,1:23:33.68:0,34,639	0/0:25,0:24:45.34:0,45,518	0/0:31,0:31:81.25:0,81,978	0/0:21,0:21:60.16:0,60,711	0/0:25,0:25:66.18:0,66,774	0/0:30,1:32:49.12:0,49,846	0/0:16,0:17:45:0,45,521	0/0:33,0:33:87.26:0,87,1046	0/0:16,0:16:45.14:0,45,543	0/0:26,0:26:66.19:0,66,786	0/0:24,0:24:66.16:0,66,760	0/0:19,0:19:45.13:0,45,532	0/0:23,0:23:40.36:0,40,758	0/0:32,0:32:93.27:0,93,1102	0/0:25,0:25:72.20:0,72,853	0/0:25,0:25:63.19:0,63,759	0/0:36,0:36:90.20:0,90,1026	0/0:34,0:35:99:0,99,1150	0/0:26,0:26:66.19:0,66,784	0/0:30,0:30:84.25:0,84,1004	0/0:30,0:30:84.25:0,84,1005	0/0:30,0:30:84.19:0,84,975	0/1:12,1:13:6.87:7,0,307	1/1:5,24:29:38.83:645,39,0	1/1:1,26:27:75.02:711,75,0	1/1:0,5:5:15.02:145,15,0
chr10	7427083	.	A	AC	8502.93	PASS	AB=0.572;AC=44;AF=0.786;AN=56;BaseQRankSum=6.527;DP=555;FS=1.506;HRun=8;HaplotypeScore=99.2269;InbreedingCoeff=0.8243;MQ=78.21;MQ0=0;MQRankSum=-4.692;QD=18.94;ReadPosRankSum=2.598;VQSLOD=4.4624;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,19:25:17.67:457,18,0	1/1:2,7:9:18.05:208,18,0	0/0:30,0:27:60.96:0,61,507	0/0:21,0:17:38.46:0,38,345	0/1:9,22:31:0.82:480,0,1	1/1:3,11:14:24.02:261,24,0	0/1:5,19:24:12.81:373,0,13	1/1:14,13:27:45.09:499,45,0	1/1:1,20:21:48.14:554,48,0	1/1:8,8:16:21.06:242,21,0	1/1:4,14:18:30.09:344,30,0	1/1:9,1:15:35.77:198,36,0	1/1:2,1:18:25.57:130,26,0	1/1:1,0:11:22.73:115,23,0	1/1:2,18:20:36.11:415,36,0	1/1:1,20:21:48.14:554,48,0	1/1:1,25:26:75.22:866,75,0	1/1:3,11:14:30.09:346,30,0	1/1:3,11:14:33.10:380,33,0	1/1:6,26:32:72.64:815,73,0	1/1:8,19:27:20.68:492,21,0	1/1:3,1:13:14.20:72,14,0	1/1:3,0:13:19.81:114,20,0	1/1:5,0:23:34.09:173,34,0	1/1:4,13:17:36.11:414,36,0	0/0:18,0:18:39.02:0,39,357	0/0:29,0:29:68.97:0,69,623	0/0:8,0:8:21.01:0,21,192
chr10	7428290	.	GA	G	18150.81	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=3.173;DP=548;FS=0.622;HRun=2;HaplotypeScore=99.0014;InbreedingCoeff=0.9901;MQ=88.11;MQ0=0;MQRankSum=-10.261;QD=35.66;ReadPosRankSum=5.668;VQSLOD=4.7183;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,33:34:96.31:1245,96,0	1/1:0,12:12:33.11:428,33,0	0/0:22,0:22:66.12:0,66,897	0/0:17,0:17:48.09:0,48,670	1/1:0,23:23:63.20:817,63,0	1/1:0,21:21:57.19:739,57,0	1/1:0,12:12:30.10:389,30,0	1/1:0,32:32:90.19:1093,90,0	1/1:0,14:14:39.13:506,39,0	1/1:0,28:28:84.23:1055,84,0	1/1:0,21:21:63.20:812,63,0	1/1:0,20:20:54.18:701,54,0	1/1:0,24:25:69.22:895,69,0	1/1:0,14:14:42.14:545,42,0	1/1:0,28:28:75.24:973,75,0	1/1:0,19:19:51.17:662,51,0	1/1:1,21:22:54.18:699,54,0	1/1:0,10:10:24.08:311,24,0	1/1:0,10:10:30.07:369,30,0	1/1:0,18:18:48.05:599,48,0	1/1:1,17:18:48.16:623,48,0	1/1:0,24:25:72.23:930,72,0	1/1:0,18:19:54.18:699,54,0	1/1:0,16:16:42.14:545,42,0	1/1:0,17:17:51.17:662,51,0	1/1:2,24:26:75.24:961,75,0	1/1:0,20:20:54.18:698,54,0	1/1:0,5:5:15.05:195,15,0
chr10	7428950	.	CCACTTGGAT	C	5128.69	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=11.236;DP=681;FS=0.000;HRun=0;HaplotypeScore=188.3178;InbreedingCoeff=0.9967;MQ=87.64;MQ0=0;MQRankSum=-10.831;QD=84.08;ReadPosRankSum=2.163;VQSLOD=4.8605;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:58:99:0,169,7745	0/0:9,0:9:27.09:0,27,1220	0/0:22,0:22:63.22:0,63,2454	0/0:32,0:32:84.28:0,84,3403	0/0:17,0:17:48.16:0,48,2285	0/0:22,0:22:63.22:0,63,2931	0/0:24,0:24:72.23:0,72,3234	0/0:24,0:24:69.24:0,69,3098	0/0:30,0:30:84.29:0,84,3967	0/0:21,0:21:60.21:0,60,2834	0/0:27,0:27:81.28:0,81,3821	0/0:27,0:27:72.25:0,72,3384	0/0:20,0:20:57.20:0,57,2581	0/0:32,0:32:93.32:0,93,4431	0/0:22,0:22:63.22:0,63,2875	0/0:23,0:23:66.23:0,66,3005	0/0:28,0:28:84.29:0,84,4018	0/0:21,0:21:63.22:0,63,2809	0/0:17,0:17:45.15:0,45,2102	0/0:18,0:18:54.19:0,54,2527	0/0:41,0:41:99:0,117,5349	0/0:16,0:16:42.14:0,42,1772	0/0:22,0:22:63.22:0,63,3001	0/0:22,0:22:60.21:0,60,2916	0/0:25,0:25:69.22:0,69,3133	1/1:0,23:23:66.23:1972,66,0	1/1:2,30:32:87.30:2607,87,0	1/1:0,6:6:18.06:550,18,0
chr10	7429035	.	TGCGTGC	T	17610.62	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=0.913;DP=565;FS=12.641;HRun=0;HaplotypeScore=167.9224;InbreedingCoeff=0.8904;MQ=67.83;MQ0=0;MQRankSum=-6.453;QD=33.87;ReadPosRankSum=3.353;VQSLOD=4.0834;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,14:29:36.12:767,36,0	1/1:2,5:7:15.01:276,15,0	0/0:26,0:26:47.83:0,48,1142	0/0:19,0:19:23.36:0,23,652	1/1:9,16:25:48.45:661,48,0	1/1:3,15:18:48.15:986,48,0	1/1:10,17:27:63.04:1129,63,0	1/1:12,11:23:33.11:663,33,0	1/1:12,14:26:45.15:944,45,0	1/1:6,12:18:39.13:826,39,0	1/1:4,7:11:15.01:237,15,0	1/1:8,17:25:51.18:1089,51,0	1/1:9,15:24:42.10:853,42,0	1/1:6,21:27:57.15:1174,57,0	1/1:7,13:20:42.05:771,42,0	1/1:4,15:19:51.17:1051,51,0	1/1:11,5:16:15.01:276,15,0	1/1:4,10:14:33.07:644,33,0	1/1:9,2:11:6.02:128,6,0	1/1:4,4:8:12:187,12,0	1/1:27,11:37:36.91:532,37,0	1/1:7,16:23:38.97:576,39,0	1/1:7,13:20:42.09:763,42,0	1/1:7,8:15:12.04:256,12,0	1/1:4,8:12:30.04:555,30,0	1/1:12,12:24:36.12:769,36,0	1/1:15,17:32:57.15:1174,57,0	1/1:3,5:8:15.05:321,15,0
chr10	7429039	.	TGC	T	2488.81	PASS	AB=0.983;AC=26;AF=0.464;AN=56;BaseQRankSum=15.297;DP=544;FS=45.829;HRun=0;HaplotypeScore=179.7317;InbreedingCoeff=-0.7386;MQ=67.14;MQ0=0;MQRankSum=-14.281;QD=5.13;ReadPosRankSum=4.753;VQSLOD=1.5397;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:27,1:28:99:120,0,238	0/1:7,0:7:43.26:43,0,69	0/0:28,0:27:71.35:0,71,1140	0/0:20,0:20:40.48:0,40,580	0/1:25,1:26:99:180,0,264	0/1:18,0:18:33.10:115,0,33	0/1:28,0:28:99:133,0,149	0/1:18,0:18:75.15:75,0,94	0/1:22,1:23:45.62:162,0,46	0/1:18,0:18:14.11:97,0,14	0/1:10,1:11:34.56:66,0,35	0/1:24,0:24:99:123,0,165	0/1:21,0:21:99:110,0,147	0/1:26,0:26:99:151,0,103	0/1:18,0:18:92.50:111,0,93	0/1:19,0:19:71.94:128,0,72	0/1:17,2:19:84.72:85,0,202	0/1:13,0:13:59.35:82,0,59	0/0:11,0:11:4.83:0,5,280	0/1:7,0:7:59.49:59,0,75	0/1:37,1:37:99:136,0,244	0/1:22,0:22:99:148,0,142	0/1:19,1:20:98.61:126,0,99	0/1:13,0:13:20.29:20,0,138	0/1:13,0:13:41.81:94,0,42	0/1:20,0:20:82.08:82,0,140	0/1:29,0:30:99:145,0,140	1/1:5,0:5:13.39:54,13,0
chr10	7429092	.	T	TA	14886.28	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-2.910;DP=635;FS=0.989;HRun=1;HaplotypeScore=140.8640;InbreedingCoeff=0.9987;MQ=84.08;MQ0=0;MQRankSum=-1.276;QD=38.77;ReadPosRankSum=0.726;VQSLOD=4.4369;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,39:41:99:1612,111,0	1/1:0,14:14:39.13:584,39,0	0/0:26,0:26:68.90:0,69,781	0/0:21,0:21:51.68:0,52,679	1/1:2,27:29:75.17:1073,75,0	1/1:1,15:16:33.08:470,33,0	1/1:1,15:16:48.12:694,48,0	1/1:1,18:20:60.19:863,60,0	1/1:1,28:29:84.25:1234,84,0	1/1:1,19:20:57.18:832,57,0	1/1:1,12:13:36.08:514,36,0	0/0:20,0:20:57.19:0,57,739	0/0:19,0:19:48.15:0,48,619	0/0:30,0:30:84.27:0,84,1090	1/1:2,14:16:39.13:584,39,0	1/1:1,23:24:69.23:1033,69,0	1/1:1,30:31:81.27:1214,81,0	1/1:1,20:21:57.07:780,57,0	1/1:1,14:15:42.14:627,42,0	1/1:0,19:19:51.17:764,51,0	1/1:0,43:43:99:1423,105,0	0/0:30,0:30:78.22:0,78,983	0/0:26,0:26:60.17:0,60,749	0/0:15,0:15:33.11:0,33,428	1/1:2,15:17:39.13:584,39,0	0/0:23,1:24:21.22:0,21,757	0/0:33,0:33:90.28:0,90,1152	0/0:7,0:7:21.07:0,21,272
chr10	7430859	.	A	AC	4237.31	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-3.026;DP=602;FS=2.212;HRun=7;HaplotypeScore=64.4863;InbreedingCoeff=0.9871;MQ=80.91;MQ0=0;MQRankSum=-2.832;QD=15.99;ReadPosRankSum=3.124;VQSLOD=4.7791;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:84.13:0,84,810	0/0:5,0:5:15.02:0,15,145	0/0:21,0:21:53.95:0,54,503	0/0:20,0:20:42.78:0,43,381	0/0:28,0:28:72.10:0,72,688	1/1:8,1:24:20.21:108,20,0	1/1:3,0:18:22.74:120,23,0	0/0:26,0:26:51.06:0,51,489	1/1:3,1:19:14.48:81,14,0	0/0:24,0:24:63.09:0,63,604	0/0:15,0:15:36.05:0,36,347	1/1:4,15:19:36.11:435,36,0	1/1:1,23:24:66.20:797,66,0	1/1:3,24:27:57.17:685,57,0	0/0:19,0:19:45.06:0,45,434	0/0:29,0:29:61.40:0,61,753	1/1:4,3:31:34.73:219,35,0	0/0:16,0:16:42.06:0,42,405	1/1:7,0:15:20.34:118,20,0	1/1:6,0:13:11.87:79,12,0	0/0:40,0:40:99:0,111,1066	1/1:0,9:9:24.07:290,24,0	1/1:2,17:19:42.13:507,42,0	1/1:6,22:28:34.56:696,35,0	1/1:6,0:19:20.12:104,20,0	0/0:26,0:26:72.10:0,72,687	0/0:26,0:26:75.01:0,75,699	0/0:9,0:9:18.03:0,18,174
chr10	7436246	.	TCTTA	T	9224.48	PASS	AB=0.521;AC=15;AF=0.268;AN=56;BaseQRankSum=-6.823;DP=738;FS=1.017;HRun=0;HaplotypeScore=155.1662;InbreedingCoeff=0.8990;MQ=84.73;MQ0=0;MQRankSum=-7.322;QD=45.22;ReadPosRankSum=-0.304;VQSLOD=5.3394;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,144,3729	1/1:0,9:9:23.96:441,24,0	0/0:19,0:19:53.21:0,53,1309	0/0:34,0:34:48.59:0,49,1910	1/1:4,23:27:66.23:1196,66,0	0/0:19,0:19:54.19:0,54,1407	0/0:25,0:25:69.24:0,69,1822	1/1:6,19:25:57.08:830,57,0	0/0:23,0:23:66.23:0,66,1723	1/1:1,22:23:66.20:1153,66,0	1/1:1,19:20:51.17:933,51,0	0/0:27,0:27:78.27:0,78,2030	0/0:26,0:26:72.25:0,72,1881	0/0:21,0:21:57.18:0,57,1405	1/1:2,31:33:87.30:1600,87,0	0/1:4,45:49:29.04:2133,0,29	0/0:29,0:29:78.27:0,78,2040	1/1:0,18:18:51.17:938,51,0	0/0:18,0:18:39.13:0,39,1011	0/0:34,0:34:99:0,99,2607	0/0:34,0:34:99:0,99,2560	0/0:31,0:31:90.31:0,90,2357	0/0:31,0:31:87.30:0,87,2297	0/0:23,0:23:60.21:0,60,1585	0/0:22,0:22:63.22:0,63,1664	0/0:25,0:25:69.24:0,69,1822	0/0:39,0:39:99:0,114,2979	0/0:3,0:3:9.03:0,9,238
chr10	7438901	.	ACT	A	2714.29	PASS	AB=0.533;AC=7;AF=0.125;AN=56;BaseQRankSum=10.212;DP=774;FS=1.493;HRun=0;HaplotypeScore=96.7050;InbreedingCoeff=0.8309;MQ=64.34;MQ0=1;MQRankSum=0.454;QD=32.70;ReadPosRankSum=0.403;VQSLOD=5.8531;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,151,2645	0/0:11,0:11:27.09:0,27,478	0/0:29,0:26:69.19:0,69,1093	0/0:30,0:29:75.17:0,75,1133	0/0:25,0:25:75.26:0,75,1327	0/0:29,0:29:84.29:0,84,1491	0/0:30,0:30:75.26:0,75,1331	0/0:23,0:23:66.22:0,66,1143	0/0:31,0:31:90.31:0,90,1597	0/0:26,0:26:69.24:0,69,1217	0/0:14,0:14:42.14:0,42,745	0/0:41,0:41:99:0,120,2112	0/0:38,0:38:99:0,108,1874	0/0:30,0:30:87.28:0,87,1501	0/0:46,0:46:99:0,126,2224	0/0:31,0:31:93.32:0,93,1645	0/0:22,0:22:66.23:0,66,1170	0/0:39,0:38:81.28:0,81,1436	0/0:20,0:20:54.17:0,54,904	0/0:19,0:19:54.17:0,54,930	1/1:2,31:34:79.50:1075,80,0	0/0:27,0:27:78.27:0,78,1383	0/0:19,0:19:57.20:0,57,1004	0/0:36,0:36:99:0,102,1795	0/0:22,0:22:63.20:0,63,1090	0/1:3,21:24:37.30:797,0,37	1/1:0,20:20:57.19:783,57,0	1/1:0,5:5:15.05:206,15,0
chr10	7439726	.	TTGTGTGTGTG	T	2256.14	PASS	AB=0.833;AC=15;AF=0.268;AN=56;BaseQRankSum=-0.416;DP=684;FS=1.390;HRun=0;HaplotypeScore=224.7453;InbreedingCoeff=0.7901;MQ=68.68;MQ0=18;MQRankSum=-3.043;QD=12.97;ReadPosRankSum=1.520;VQSLOD=2.5205;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:33:26.15:0,26,536	1/1:5,9:15:18.05:387,18,0	0/0:41,0:19:12.86:0,13,176	0/0:50,0:28:16.80:0,17,170	1/1:10,17:28:16.54:141,17,0	0/0:20,0:33:24.07:0,24,776	0/0:13,0:22:23.52:0,24,517	1/1:24,0:23:0.69:34,1,0	0/0:10,0:23:30.97:0,31,1108	1/1:13,5:19:10:574,10,0	1/1:9,5:14:14.68:218,15,0	0/0:15,0:21:42.10:0,42,1649	0/0:15,0:18:36.10:0,36,1033	0/0:8,0:16:21.06:0,21,768	1/1:17,13:33:0.82:180,1,0	1/1:13,11:26:30.03:668,30,0	0/0:14,0:27:32.55:0,33,865	0/1:12,2:15:31.83:234,0,32	0/0:14,0:21:32.46:0,32,873	0/0:10,0:21:18.06:0,18,699	0/0:21,0:31:45.01:0,45,904	0/0:11,0:18:18.06:0,18,731	0/0:19,0:21:23.85:0,24,772	0/0:19,0:38:45.12:0,45,1626	0/0:9,0:20:27.06:0,27,983	0/0:21,0:23:39.07:0,39,754	0/0:10,0:18:36.12:0,36,896	0/0:4,0:8:21.07:0,21,553
chr10	7439778	.	ATCTG	A	2313.21	PASS	AB=0.553;AC=7;AF=0.125;AN=56;BaseQRankSum=2.302;DP=727;FS=1.827;HRun=0;HaplotypeScore=207.3645;InbreedingCoeff=0.9014;MQ=56.39;MQ0=7;MQRankSum=-1.526;QD=25.14;ReadPosRankSum=3.006;VQSLOD=3.5868;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:37.65:0,38,647	0/0:22,0:22:27.84:0,28,498	0/0:44,0:27:22.04:0,22,1564	0/0:39,0:20:30.32:0,30,870	0/0:35,0:35:29.23:0,29,496	0/0:29,0:29:39.13:0,39,915	0/0:13,0:12:21.07:0,21,505	0/0:41,0:41:93.28:0,93,1661	0/0:29,0:29:60.19:0,60,1384	0/0:26,0:25:59.67:0,60,997	0/0:23,0:23:26.63:0,27,400	0/0:22,0:22:51.15:0,51,1172	0/0:20,0:20:57.20:0,57,1412	0/0:17,0:17:45.15:0,45,1034	0/0:33,0:33:37.76:0,38,531	0/0:26,0:26:33.56:0,34,538	0/0:23,0:23:48.16:0,48,1160	0/0:17,0:17:35.17:0,35,654	0/0:16,0:15:30.10:0,30,734	0/0:26,0:25:48.05:0,48,1185	1/1:9,24:33:36.01:611,36,0	0/0:18,0:18:45.15:0,45,1116	0/0:22,0:22:47.89:0,48,1113	0/0:29,0:29:75.24:0,75,1799	0/0:30,0:29:63.22:0,63,1476	0/1:4,17:21:0:778,0,0	1/1:5,24:29:54.17:916,54,0	1/1:5,4:8:9.03:153,9,0
chr10	7439794	.	G	GTCTA	8978.54	PASS	AB=0.955;AC=19;AF=0.339;AN=56;BaseQRankSum=-12.379;DP=760;FS=1.203;HRun=0;HaplotypeScore=183.6496;InbreedingCoeff=0.9148;MQ=73.91;MQ0=1;MQRankSum=-2.407;QD=28.59;ReadPosRankSum=3.427;VQSLOD=4.9447;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,31:42:30.57:784,31,0	1/1:5,18:26:35.48:834,35,0	0/0:53,0:48:99:0,102,1602	0/0:24,0:22:29.87:0,30,714	1/1:4,36:42:29.29:722,29,0	0/0:24,0:24:41.84:0,42,686	0/0:11,0:10:27.07:0,27,418	1/1:9,30:41:96.16:1908,96,0	0/0:27,0:27:60.15:0,60,995	1/1:5,24:29:65.50:1583,65,0	1/1:1,23:26:24.99:625,25,0	0/0:26,0:26:63.11:0,63,913	0/0:22,0:22:66.18:0,66,1091	0/0:21,0:21:60.10:0,60,872	1/1:10,28:40:33.11:859,33,0	1/1:6,18:25:30.10:781,30,0	0/0:28,0:28:72.07:0,72,1000	1/1:1,21:22:33.11:862,33,0	0/0:12,0:13:19.80:0,20,533	0/0:29,0:29:56.78:0,57,880	0/0:30,0:30:48:0,48,529	0/0:22,0:22:56.06:0,56,828	0/0:19,0:19:51.12:0,51,803	0/0:33,0:33:86.77:0,87,1419	0/0:31,0:30:69.09:0,69,1064	0/1:20,1:21:20.56:21,0,521	0/0:28,0:28:63.13:0,63,677	0/0:5,0:5:12.02:0,12,127
chr10	7441588	.	GA	G	6730.49	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=4.330;DP=636;FS=2.273;HRun=2;HaplotypeScore=76.5712;InbreedingCoeff=0.9943;MQ=84.25;MQ0=0;MQRankSum=-1.063;QD=35.80;ReadPosRankSum=1.224;VQSLOD=5.4683;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:54.15:0,54,767	1/1:0,9:9:24.08:312,24,0	0/0:21,0:21:55.36:0,55,733	0/0:17,0:17:38.37:0,38,492	1/1:0,32:32:93.30:1207,93,0	0/0:31,0:31:90.30:0,90,1342	0/0:12,0:12:33.07:0,33,434	1/1:1,33:34:96.22:1154,96,0	0/0:22,0:22:60.20:0,60,892	1/1:0,19:19:57.19:739,57,0	1/1:0,25:25:72.15:912,72,0	0/0:25,0:25:75.25:0,75,1121	0/0:32,0:32:93.30:0,93,1369	0/0:19,0:19:57.17:0,57,813	1/1:0,24:24:72.23:935,72,0	1/1:1,26:27:30.29:890,30,0	0/0:18,0:18:54.17:0,54,789	1/1:1,17:18:45.62:583,46,0	0/0:27,0:27:78.23:0,78,1128	0/0:39,0:39:99:0,117,1733	0/0:22,0:22:57.19:0,57,853	0/0:19,0:19:57.19:0,57,854	0/0:26,0:26:78.25:0,78,1147	0/0:16,0:16:45.13:0,45,652	0/0:21,0:21:63.15:0,63,863	0/0:22,1:23:30.28:0,30,943	0/0:36,0:36:99:0,102,1463	0/0:4,0:4:12.04:0,12,165
chr10	7441628	.	TA	T	6072.85	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=5.412;DP=601;FS=8.744;HRun=8;HaplotypeScore=72.9566;InbreedingCoeff=0.9914;MQ=84.40;MQ0=0;MQRankSum=-1.412;QD=26.64;ReadPosRankSum=2.933;VQSLOD=5.3754;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:43.37:0,43,510	0/0:10,0:10:27.08:0,27,325	0/0:16,0:16:33.08:0,33,380	0/0:20,0:20:32.07:0,32,480	0/0:31,0:31:81.25:0,81,978	1/1:0,27:27:78.13:753,78,0	1/1:0,12:12:36.06:348,36,0	0/0:39,0:39:99:0,102,1220	1/1:1,23:24:66.11:637,66,0	0/0:25,0:25:69.20:0,69,824	0/0:25,0:25:63.19:0,63,759	0/0:24,0:24:69.19:0,69,818	0/0:28,0:28:78.23:0,78,932	0/0:15,0:15:42.13:0,42,507	0/0:27,0:27:72.21:0,72,861	0/0:20,0:20:51.13:0,51,593	1/1:0,15:15:42.07:406,42,0	0/0:16,0:16:42.11:0,42,492	1/1:3,25:28:75.09:713,75,0	1/1:1,31:32:90.14:869,90,0	1/1:1,13:14:36.06:348,36,0	0/0:16,0:16:45.14:0,45,544	0/0:22,0:22:60.17:0,60,705	0/0:22,0:22:60.17:0,60,712	1/1:1,24:25:69.11:666,69,0	1/1:1,20:21:57.09:551,57,0	1/1:1,26:27:72.12:695,72,0	1/1:0,3:3:9.01:87,9,0
chr10	7443554	.	G	GA	7168.87	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-0.993;DP=679;FS=0.301;HRun=8;HaplotypeScore=73.5194;InbreedingCoeff=0.9939;MQ=83.70;MQ0=0;MQRankSum=-1.875;QD=20.84;ReadPosRankSum=1.027;VQSLOD=4.9967;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:81.01:0,81,735	1/1:0,10:10:27.08:312,27,0	0/0:23,0:23:21.73:0,22,410	0/0:17,0:17:35.27:0,35,291	1/1:4,23:27:44.75:769,45,0	0/0:24,0:24:63.03:0,63,577	0/0:24,0:24:54:0,54,488	1/1:4,25:29:75.21:855,75,0	0/0:22,0:22:54.01:0,54,490	1/1:5,19:24:63.17:715,63,0	1/1:2,21:23:63.19:726,63,0	1/1:9,1:34:62.33:314,62,0	1/1:5,1:23:42.74:222,43,0	1/1:5,0:27:53.97:274,54,0	1/1:1,25:26:66.20:762,66,0	1/1:3,22:25:69.16:781,69,0	0/0:28,0:28:71.98:0,72,651	1/1:2,14:16:17.62:442,18,0	0/0:19,0:19:54.03:0,54,493	0/0:28,1:29:46.43:0,46,679	0/0:16,0:16:45:0,45,407	1/1:3,1:26:62.66:336,63,0	1/1:2,0:31:73.99:381,74,0	1/1:1,1:23:51.30:280,51,0	0/0:25,0:25:72.04:0,72,658	0/0:36,0:36:93.05:0,93,851	0/0:34,0:33:90.04:0,90,823	0/0:6,0:6:12:0,12,110
chr10	7444289	.	CAG	C	11300.54	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=15.732;DP=834;FS=1.199;HRun=0;HaplotypeScore=102.9329;InbreedingCoeff=0.9918;MQ=81.38;MQ0=3;MQRankSum=-1.891;QD=35.31;ReadPosRankSum=3.657;VQSLOD=6.8314;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:56:99:0,169,3098	0/0:13,0:13:30.09:0,30,522	0/0:28,0:28:52.13:0,52,1033	0/0:24,0:24:61.76:0,62,922	0/0:32,0:32:87.26:0,87,1560	1/1:0,16:16:36.12:528,36,0	1/1:0,34:34:81.27:1192,81,0	0/0:39,0:39:99:0,114,2033	1/1:4,32:36:25.11:1091,25,0	0/0:25,0:25:75.24:0,75,1311	0/0:28,0:28:78.25:0,78,1426	0/0:30,0:30:90.27:0,90,1580	0/0:31,0:31:93.32:0,93,1720	0/0:23,0:23:69.22:0,69,1243	0/0:41,0:41:99:0,120,2235	0/0:26,1:27:34.11:0,34,1317	1/1:3,35:38:93.31:1367,93,0	0/0:23,0:23:66.13:0,66,1121	1/1:3,24:27:72.17:958,72,0	1/1:0,28:28:75.25:1102,75,0	1/1:1,59:59:99:2251,154,0	0/0:31,0:31:84.23:0,84,1472	0/0:26,0:26:69.21:0,69,1210	0/0:37,0:37:99:0,108,1989	1/1:0,22:22:60.20:883,60,0	1/1:3,24:27:13.21:871,13,0	1/1:1,26:26:60.04:882,60,0	1/1:0,4:4:12.04:176,12,0
chr10	7444550	.	GCTCTCT	G	18120.43	PASS	AB=1.000;AC=53;AF=0.946;AN=56;BaseQRankSum=-0.913;DP=584;FS=17.176;HRun=0;HaplotypeScore=156.3216;InbreedingCoeff=0.5153;MQ=62.48;MQ0=0;MQRankSum=-4.677;QD=32.59;ReadPosRankSum=5.272;VQSLOD=3.4651;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:10,27:37:39.13:851,39,0	1/1:1,8:9:5.92:131,6,0	0/0:27,0:26:45.13:0,45,1304	0/1:27,0:22:9.05:9,0,786	1/1:2,20:22:30.10:654,30,0	1/1:4,27:31:51.18:1112,51,0	1/1:8,17:25:36.12:785,36,0	1/1:9,18:29:60.16:1130,60,0	1/1:3,17:20:39.13:851,39,0	1/1:3,19:22:54.18:1152,54,0	1/1:3,10:12:21.07:458,21,0	1/1:3,19:22:42.14:916,42,0	1/1:10,19:29:48.16:1047,48,0	1/1:5,16:22:41.76:892,42,0	1/1:5,17:22:36.12:785,36,0	1/1:3,6:9:12.04:262,12,0	1/1:6,8:14:18.06:393,18,0	1/1:5,4:9:9.03:196,9,0	1/1:4,4:8:12.04:254,12,0	1/1:10,13:23:21.07:458,21,0	1/1:7,7:14:6.02:131,6,0	1/1:0,24:24:48.16:1047,48,0	1/1:6,11:17:15.05:327,15,0	1/1:4,10:14:15.05:327,15,0	1/1:7,25:32:36.12:785,36,0	1/1:4,24:28:66.68:1400,67,0	1/1:2,26:28:75.26:1636,75,0	1/1:4,2:6:6.02:131,6,0
chr10	7444863	.	CTGTGTGTGTGTGTG	C	3751.38	PASS	AB=1.000;AC=13;AF=0.241;AN=54;BaseQRankSum=4.989;DP=583;FS=4.672;HRun=0;HaplotypeScore=199.5709;InbreedingCoeff=0.8014;MQ=54.29;MQ0=20;MQRankSum=-6.802;QD=27.58;ReadPosRankSum=3.982;VQSLOD=2.6971;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:29:42.09:0,42,2024	0/0:6,0:5:3.01:0,3,152	0/1:29,0:12:0:0,0,0	0/0:35,0:19:17.95:0,18,353	0/0:25,0:24:9.03:0,9,453	0/0:21,0:27:9.01:0,9,350	0/0:18,0:26:30.03:0,30,952	0/0:32,0:27:52.73:0,53,1964	0/0:7,0:7:9.03:0,9,439	0/0:24,0:21:36.09:0,36,1668	./.	1/1:8,11:19:21.06:819,21,0	1/1:5,12:17:14.61:591,15,0	1/1:7,7:15:30.10:1086,30,0	0/0:5,0:21:18.06:0,18,1038	0/0:22,0:22:20.88:0,21,958	0/0:21,0:21:30.10:0,30,1562	0/0:17,0:15:23:0,23,673	0/0:13,0:21:42.14:0,42,2141	0/0:27,0:26:24.08:0,24,1314	0/0:13,0:19:16.30:0,16,580	1/1:10,7:17:6.59:350,7,0	1/1:9,9:20:21.07:787,21,0	1/1:10,9:19:3.01:118,3,0	0/0:23,0:23:6.70:0,7,474	0/0:15,0:19:39.09:0,39,1755	0/0:19,0:19:25.33:0,25,1357	0/0:3,0:3:6.02:0,6,363
chr10	7444867	.	G	GC	1219.80	PASS	AB=0.714;AC=7;AF=0.130;AN=54;BaseQRankSum=-3.281;DP=569;FS=13.714;HRun=0;HaplotypeScore=117.1824;InbreedingCoeff=-0.1673;MQ=53.70;MQ0=20;MQRankSum=1.162;QD=8.47;ReadPosRankSum=1.187;VQSLOD=3.0709;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:32:59.83:0,60,705	0/1:3,3:5:32.91:87,0,33	0/0:25,0:9:6.15:0,6,219	0/0:34,0:18:49.01:0,49,609	0/1:10,12:21:70.77:84,0,71	0/0:27,0:26:33.91:0,34,417	0/0:27,0:27:45.08:0,45,597	0/1:19,14:28:99:399,0,365	0/0:6,0:6:9.02:0,9,105	0/1:12,10:18:99:350,0,162	./.	0/0:19,0:19:32.99:0,33,312	0/0:15,0:15:20.22:0,20,154	0/0:15,0:15:40.76:0,41,318	0/1:20,0:21:65.65:66,0,101	0/1:10,12:21:99:225,0,108	0/0:21,0:21:42.11:0,42,524	0/1:10,8:16:99:138,0,131	0/0:21,0:21:59.75:0,60,767	0/0:26,0:25:48.16:0,48,661	0/0:20,0:19:18.52:0,19,224	0/0:16,0:16:23.40:0,23,249	0/0:21,0:21:37.95:0,38,348	0/0:19,0:19:14.88:0,15,180	0/0:22,0:22:21:0,21,267	0/0:19,1:19:6.88:0,7,567	0/0:19,0:18:39.54:0,40,456	0/0:3,0:3:6.01:0,6,69
chr10	7445223	.	AT	A	1121.29	PASS	AB=0.913;AC=9;AF=0.161;AN=56;BaseQRankSum=8.568;DP=524;FS=1.128;HRun=9;HaplotypeScore=52.8144;InbreedingCoeff=0.8095;MQ=86.51;MQ0=0;MQRankSum=0.528;QD=15.36;ReadPosRankSum=-0.834;VQSLOD=3.3772;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:93.22:0,93,1040	0/0:2,0:2:3.01:0,3,35	0/1:18,2:21:56.51:57,0,277	0/0:20,0:21:24.61:0,25,477	0/0:21,0:21:51.15:0,51,588	0/0:28,0:28:75.22:0,75,866	0/0:19,0:19:51.62:0,52,584	0/0:20,0:20:48.12:0,48,537	0/0:15,0:15:36.11:0,36,416	0/0:16,0:16:42.12:0,42,485	0/0:13,0:13:36.09:0,36,406	0/0:17,0:17:51.15:0,51,589	0/0:23,0:23:66.17:0,66,744	0/0:23,0:23:60.16:0,60,680	0/0:23,0:23:69.21:0,69,796	0/0:20,0:20:60.17:0,60,685	0/0:22,0:23:60.01:0,60,672	0/0:16,0:16:42.12:0,42,485	0/0:20,0:20:48.14:0,48,554	0/0:19,0:19:54.16:0,54,617	1/1:3,20:23:54.02:494,54,0	0/0:19,0:19:51.15:0,51,589	0/0:25,0:25:66.15:0,66,743	0/0:25,0:25:69.16:0,69,781	0/0:10,0:10:27.08:0,27,312	1/1:1,17:18:19.40:428,19,0	1/1:0,8:8:24.01:220,24,0	1/1:0,3:3:9:82,9,0
chr10	7445631	.	T	TTAACTAAC	9953.13	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-7.884;DP=558;FS=1.357;HRun=0;HaplotypeScore=138.4823;InbreedingCoeff=0.9823;MQ=72.79;MQ0=0;MQRankSum=-10.968;QD=58.89;ReadPosRankSum=-2.853;VQSLOD=4.4718;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:57.13:0,57,1367	1/1:4,5:9:11.59:502,12,0	0/0:16,0:16:24.05:0,24,377	0/0:12,0:12:11.36:0,11,163	1/1:9,14:25:45.02:1329,45,0	0/0:24,0:24:66.23:0,66,1675	0/0:17,0:17:30.03:0,30,567	1/1:31,0:31:60.18:1403,60,0	0/0:26,0:26:49.98:0,50,1181	1/1:11,8:20:45.13:1402,45,0	1/1:8,7:17:30.10:1037,30,0	0/0:12,0:12:36.11:0,36,818	0/0:25,0:25:69.10:0,69,1414	0/0:18,0:18:45.12:0,45,1060	1/1:4,17:23:42.14:1692,42,0	1/1:6,29:35:60.20:2385,60,0	0/0:31,0:31:75.21:0,75,1682	1/1:9,0:9:14.85:203,15,0	0/0:12,0:12:33.05:0,33,591	0/0:27,0:27:69.21:0,69,1611	0/0:18,0:18:39.12:0,39,919	0/0:19,0:19:45.15:0,45,1137	0/0:11,0:11:18.01:0,18,358	0/0:23,0:23:57.20:0,57,1474	0/0:15,0:15:39.13:0,39,935	0/0:24,0:24:54.17:0,54,1258	0/0:26,0:25:54.10:0,54,1071	0/0:10,0:10:18.06:0,18,393
chr10	7447191	.	TA	T	1583.51	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=8.180;DP=687;FS=6.974;HRun=1;HaplotypeScore=65.8285;InbreedingCoeff=0.9984;MQ=88.89;MQ0=0;MQRankSum=-4.558;QD=35.99;ReadPosRankSum=2.046;VQSLOD=3.7856;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,44:44:99:1678,120,0	0/0:9,0:9:27.09:0,27,432	0/0:24,0:24:59.37:0,59,903	0/0:28,0:28:81.02:0,81,1206	0/0:27,0:27:81.28:0,81,1294	0/0:20,0:20:60.20:0,60,959	0/0:28,0:28:84.29:0,84,1336	0/0:25,0:25:75.26:0,75,1187	0/0:37,0:37:99:0,111,1749	0/0:24,0:24:69.23:0,69,1101	0/0:16,0:16:48.15:0,48,742	0/0:26,0:26:78.27:0,78,1243	0/0:34,0:34:99:0,102,1601	0/0:30,0:30:90.31:0,90,1436	0/0:27,0:27:75.24:0,75,1167	0/0:21,0:21:63.20:0,63,984	0/0:29,0:28:84.29:0,84,1343	0/0:15,0:15:45.15:0,45,719	0/0:15,0:15:45.11:0,45,672	0/0:28,0:28:84.29:0,84,1342	0/0:24,0:24:72.25:0,72,1151	0/0:18,0:18:54.17:0,54,840	0/0:24,0:24:69.24:0,69,1103	0/0:30,0:30:90.31:0,90,1436	0/0:21,0:21:63.20:0,63,978	0/0:29,0:29:87.29:0,87,1374	0/0:24,0:23:72.25:0,72,1145	0/0:10,0:10:30.10:0,30,480
chr10	7448296	.	C	CA	13307.09	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=0.860;DP=676;FS=27.285;HRun=8;HaplotypeScore=150.1150;InbreedingCoeff=0.9460;MQ=74.93;MQ0=0;MQRankSum=-6.699;QD=21.16;ReadPosRankSum=3.896;VQSLOD=3.1340;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,19:25:51.15:585,51,0	1/1:2,7:9:21.06:238,21,0	0/0:27,0:25:68.94:0,69,605	0/0:20,0:19:10.25:0,10,245	1/1:5,37:42:99:1225,111,0	1/1:13,14:27:63.08:677,63,0	1/1:10,7:17:35.52:349,36,0	1/1:4,10:14:32.96:337,33,0	1/1:15,6:21:39.06:412,39,0	1/1:7,23:30:84.03:902,84,0	1/1:3,27:30:81.11:883,81,0	1/1:4,1:28:19.27:110,19,0	1/1:6,0:24:43.32:217,43,0	1/1:6,1:28:17.66:142,18,0	1/1:0,19:19:54.15:609,54,0	1/1:3,18:21:48.11:526,48,0	1/1:11,5:15:29.40:283,29,0	1/1:6,12:18:11.64:369,12,0	1/1:9,5:14:35.69:350,36,0	1/1:11,20:31:84.66:912,85,0	1/1:0,25:25:60.17:679,60,0	1/1:8,1:31:75.17:427,75,0	1/1:3,0:16:22.38:110,22,0	1/1:7,0:35:30.69:196,31,0	1/1:16,12:28:45.08:488,45,0	1/1:5,27:32:87.09:910,87,0	1/1:7,33:40:99:1134,102,0	1/1:1,7:8:21.94:238,22,0
chr10	7448303	.	AAGC	A	5058.52	PASS	AB=0.905;AC=21;AF=0.375;AN=56;BaseQRankSum=-4.728;DP=673;FS=13.595;HRun=0;HaplotypeScore=195.9132;InbreedingCoeff=-0.3414;MQ=72.42;MQ0=4;MQRankSum=-5.097;QD=11.44;ReadPosRankSum=-2.865;VQSLOD=3.0782;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:1.77:0,2,220	0/1:8,0:8:74.17:74,0,77	0/0:31,0:23:69.13:0,69,1123	0/0:22,0:19:36.14:0,36,772	0/1:39,3:42:99:366,0,443	0/1:20,4:24:75.39:340,0,75	0/1:13,3:16:44.31:354,0,44	0/1:12,1:13:99:157,0,135	0/1:9,12:21:19.01:276,0,19	0/1:27,4:31:99:223,0,239	0/1:28,0:28:99:166,0,230	0/0:29,0:29:31.87:0,32,362	0/0:25,0:25:23.84:0,24,500	0/0:25,0:25:36.19:0,36,381	0/1:20,0:20:99:116,0,137	0/1:22,1:23:99:212,0,257	0/1:12,3:14:44.66:307,0,45	0/1:16,2:17:99:156,0,146	0/1:8,7:15:9.33:291,0,9	1/1:27,9:36:6.70:819,7,0	0/1:25,0:25:99:214,0,155	0/0:30,0:30:26.37:0,26,787	0/0:17,0:17:26.19:0,26,409	0/0:32,0:32:42.70:0,43,512	1/1:14,11:25:6.29:204,6,0	0/1:32,1:34:99:360,0,331	0/1:36,2:38:99:341,0,232	0/1:10,0:10:82.04:82,0,143
chr10	7448313	.	G	GAAAA	7729.04	PASS	AB=1.000;AC=18;AF=0.321;AN=56;BaseQRankSum=-4.520;DP=677;FS=6.366;HRun=3;HaplotypeScore=202.0494;InbreedingCoeff=0.8086;MQ=60.76;MQ0=10;MQRankSum=-10.116;QD=35.78;ReadPosRankSum=-3.028;VQSLOD=1.0907;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:54.63:0,55,317	0/0:7,0:7:16.60:0,17,86	0/0:31,0:16:39.02:0,39,465	0/0:21,0:13:33:0,33,530	0/0:41,0:41:94.26:0,94,583	1/1:4,20:25:48.42:1358,48,0	1/1:6,12:20:18.74:542,19,0	0/0:20,0:20:34.23:0,34,289	1/1:17,7:24:39.93:1000,40,0	0/0:34,0:34:74.66:0,75,503	0/0:28,0:27:59.03:0,59,369	0/0:23,0:23:7.97:0,8,97	0/1:22,0:22:32.61:33,0,133	1/1:23,0:23:7.36:56,7,0	0/0:18,0:18:47.65:0,48,245	0/0:24,0:24:52.65:0,53,388	1/1:15,5:19:39.24:719,39,0	0/0:20,0:18:40.27:0,40,274	1/1:8,6:14:29.29:808,29,0	1/1:23,13:36:78.08:1927,78,0	0/0:22,0:21:50.57:0,51,276	0/0:30,0:30:38.36:0,38,337	0/0:20,0:20:4.46:0,4,212	0/0:31,0:31:35.68:0,36,247	1/1:10,13:23:53.66:1282,54,0	0/0:30,0:30:80.67:0,81,569	0/0:37,0:37:91.24:0,91,484	0/1:9,0:8:4.63:5,0,62
chr10	7449195	.	C	CAAACAGTAGCT	24482.88	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-6.206;DP=691;FS=3.474;HRun=0;HaplotypeScore=208.6234;InbreedingCoeff=0.9972;MQ=75.48;MQ0=2;MQRankSum=-18.321;QD=136.78;ReadPosRankSum=0.012;VQSLOD=5.3221;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,20:35:75.21:4129,75,0	0/0:6,0:6:18.06:0,18,653	0/0:23,0:23:62.88:0,63,1927	0/0:16,0:16:42.14:0,42,1341	0/0:19,0:19:57.20:0,57,2100	0/0:24,0:24:72.23:0,72,2499	0/0:29,0:29:87.30:0,87,3124	0/0:24,0:24:72.23:0,72,2253	0/0:41,0:41:99:0,120,4400	0/0:21,0:21:60.20:0,60,2114	0/0:22,0:22:66.20:0,66,2169	1/1:8,17:24:69.24:4048,69,0	1/1:5,21:28:81.28:4688,81,0	1/1:7,16:29:72.25:4190,72,0	0/0:35,0:35:99:0,105,3587	0/0:26,0:26:78.25:0,78,2734	0/0:33,0:33:99:0,99,3438	0/0:20,0:20:60.21:0,60,2234	0/0:18,0:18:54.19:0,54,1730	0/0:23,0:23:69.24:0,69,2486	0/0:49,0:49:99:0,141,4820	1/1:11,10:24:60.21:3269,60,0	1/1:8,12:22:57.15:2988,57,0	1/1:3,9:15:21.96:1170,22,0	0/0:26,0:26:78.27:0,78,2721	0/0:25,0:25:75.24:0,75,2457	0/0:25,0:25:75.26:0,75,2663	0/0:7,0:7:21.07:0,21,783
chr10	7450295	.	GCACACACACACACACA	G	2188.20	PASS	AB=0.692;AC=10;AF=0.185;AN=54;BaseQRankSum=6.047;DP=517;FS=18.369;HRun=0;HaplotypeScore=187.7220;InbreedingCoeff=0.5423;MQ=64.92;MQ0=18;MQRankSum=-5.139;QD=16.70;ReadPosRankSum=-0.684;VQSLOD=1.2276;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:18:9.03:0,9,340	0/0:5,0:5:9.03:0,9,347	./.	0/0:48,0:21:5.91:0,6,40	0/0:11,0:13:21.05:0,21,1005	0/0:17,0:21:18.03:0,18,547	0/0:9,0:11:12.02:0,12,313	0/0:13,0:13:6.50:0,7,29	0/0:10,0:12:14.84:0,15,309	0/0:14,0:14:21.96:0,22,954	0/0:13,0:13:9.03:0,9,347	1/1:11,7:21:10:844,10,0	1/1:15,4:19:12.01:413,12,0	1/1:8,7:16:11.69:504,12,0	0/0:21,0:21:27.06:0,27,1226	0/0:10,0:11:9.92:0,10,529	0/0:18,0:19:15.02:0,15,488	0/0:16,0:15:18.04:0,18,489	0/0:13,0:12:6.90:0,7,184	0/0:11,0:13:12.51:0,13,406	0/0:29,0:34:42.14:0,42,2107	0/1:15,10:27:49.67:339,0,50	1/1:8,3:12:3.90:113,4,0	0/1:20,16:35:99:124,0,110	0/0:12,0:15:12.03:0,12,418	0/0:11,0:12:18.06:0,18,741	0/0:14,0:16:15.05:0,15,721	0/0:2,0:4:6.02:0,6,218
chr10	7451954	.	GGCACA	G	7124.49	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=8.922;DP=670;FS=6.019;HRun=0;HaplotypeScore=145.2821;InbreedingCoeff=0.9998;MQ=75.22;MQ0=0;MQRankSum=-8.611;QD=46.87;ReadPosRankSum=4.216;VQSLOD=4.7804;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,19:22:48.12:952,48,0	0/0:16,0:16:45.15:0,45,1346	0/0:22,0:22:57.20:0,57,1557	0/0:19,0:19:51.14:0,51,1255	0/0:33,0:33:93.32:0,93,2820	0/0:33,0:33:87.30:0,87,2613	0/0:23,0:23:57.20:0,57,1723	0/0:33,0:33:87.26:0,87,2376	0/0:19,0:19:54.17:0,54,1593	0/0:28,0:28:81.27:0,81,2413	0/0:31,0:31:90.31:0,90,2702	1/1:4,20:24:42.14:869,42,0	1/1:0,23:23:60.21:1243,60,0	1/1:1,20:21:57.20:1180,57,0	0/0:20,0:20:39.13:0,39,1173	0/0:21,0:21:54.19:0,54,1641	0/0:25,0:25:66.21:0,66,1960	0/0:13,0:13:39.13:0,39,1177	0/0:22,0:22:60.15:0,60,1696	0/0:36,0:36:99:0,102,2948	0/0:23,0:23:63.20:0,63,1869	1/1:1,23:24:66.18:1326,66,0	1/1:1,24:25:44.89:933,45,0	1/1:0,13:13:30.04:621,30,0	0/0:32,0:32:84.29:0,84,2577	0/0:30,0:30:87.29:0,87,2578	0/0:27,0:27:63.22:0,63,1935	0/0:12,0:12:36.12:0,36,1106
chr10	7452022	.	GTT	G	13838.81	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=3.844;DP=636;FS=17.106;HRun=9;HaplotypeScore=87.3606;InbreedingCoeff=0.9994;MQ=70.10;MQ0=2;MQRankSum=-0.331;QD=28.95;ReadPosRankSum=5.309;VQSLOD=3.4390;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,21:25:49.45:591,49,0	1/1:2,14:16:39.11:455,39,0	0/0:24,0:23:45.11:0,45,652	0/0:17,0:17:24.06:0,24,429	1/1:4,21:25:51.13:594,51,0	1/1:4,22:26:25.81:662,26,0	1/1:0,28:27:63.19:734,63,0	1/1:3,28:31:81.18:900,81,0	1/1:1,24:25:66.19:769,66,0	1/1:3,29:32:87.24:1011,87,0	1/1:0,21:21:60.18:699,60,0	0/0:19,0:19:48.16:0,48,778	0/0:22,0:22:51.17:0,51,829	0/0:20,0:20:48.16:0,48,773	1/1:0,18:17:48.14:559,48,0	1/1:1,31:31:78.23:909,78,0	1/1:2,23:25:63.18:734,63,0	1/1:2,14:16:39.11:454,39,0	1/1:3,17:19:48.11:549,48,0	1/1:1,21:22:54.14:629,54,0	1/1:1,23:24:63.19:734,63,0	0/0:18,0:18:51.13:0,51,807	0/0:20,0:20:57.15:0,57,904	0/0:18,0:18:51.16:0,51,797	1/1:1,18:19:45.13:524,45,0	1/1:2,30:32:90.25:1037,90,0	1/1:0,28:28:72.21:839,72,0	1/1:0,13:13:39.12:454,39,0
chr10	7453235	.	C	CCATAGTGTCTCATAGGAAGGTG	33036.93	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-13.658;DP=669;FS=14.287;HRun=0;HaplotypeScore=387.4589;InbreedingCoeff=0.9991;MQ=91.46;MQ0=0;MQRankSum=-17.268;QD=203.93;ReadPosRankSum=2.256;VQSLOD=4.0020;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:51.18:0,51,2974	0/0:11,0:11:33.11:0,33,2043	0/0:23,0:23:69.22:0,69,2927	0/0:37,0:37:99:0,108,4551	0/0:22,0:22:66.23:0,66,3404	0/0:32,0:32:93.32:0,93,5079	0/0:19,0:19:54.15:0,54,2587	0/0:26,0:26:69.23:0,69,3436	0/0:19,0:19:54.19:0,54,2769	0/0:27,0:27:78.25:0,78,3852	0/0:23,0:23:69.22:0,69,3279	1/1:17,10:31:78.27:6981,78,0	1/1:17,13:31:84.29:7892,84,0	1/1:14,5:23:51.17:4616,51,0	0/0:22,0:22:63.22:0,63,3606	0/0:34,0:34:99:0,102,5254	0/0:13,0:13:39.11:0,39,2064	0/0:7,0:7:21.07:0,21,1192	0/0:26,0:26:78.27:0,78,4129	0/0:31,0:31:90.27:0,90,4482	0/0:25,0:25:69.24:0,69,4024	1/1:19,10:30:69.24:5103,69,0	1/1:19,14:33:72.25:6186,72,0	1/1:11,2:14:33.11:2259,33,0	0/0:21,0:21:63.22:0,63,3475	0/0:21,0:21:60.21:0,60,3659	0/0:26,0:26:72.24:0,72,4198	0/0:25,0:25:75.26:0,75,4180
chr10	7454696	.	CTGTGTGTGTG	C	741.59	PASS	AB=0.900;AC=13;AF=0.271;AN=48;BaseQRankSum=0.999;DP=559;FS=1.259;HRun=0;HaplotypeScore=161.2766;InbreedingCoeff=0.3094;MQ=55.54;MQ0=15;MQRankSum=-1.702;QD=4.61;ReadPosRankSum=1.369;VQSLOD=2.2032;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:19,2:22:69.20:69,0,78	0/0:10,0:10:2.60:0,3,10	./.	./.	0/0:13,0:18:3.48:0,3,67	0/0:26,0:27:8.62:0,9,110	0/0:24,0:27:13.40:0,13,204	0/0:25,0:22:3.01:0,3,58	0/0:19,0:19:15.05:0,15,581	0/0:16,0:15:5.30:0,5,62	0/0:19,0:19:6.02:0,6,90	1/1:7,4:11:6.02:174,6,0	1/1:15,1:17:9.03:206,9,0	1/1:12,9:21:2.90:47,3,0	0/0:14,0:20:3.01:0,3,84	0/1:18,0:21:36.22:36,0,77	0/0:15,0:16:9.50:0,10,120	0/0:12,0:12:7.01:0,7,26	0/0:16,0:15:6.01:0,6,65	0/0:20,0:20:3.01:0,3,63	./.	0/0:16,0:16:0.47:0,0,1	0/0:14,5:18:1.41:0,1,2	1/1:27,2:29:5.96:158,6,0	0/0:8,0:9:3.01:0,3,50	0/1:24,0:23:2.35:58,0,2	./.	1/1:7,0:11:1.42:126,1,0
chr10	7454768	.	CAGAG	C	4275.37	PASS	AB=0.692;AC=21;AF=0.375;AN=56;BaseQRankSum=8.615;DP=534;FS=8.165;HRun=0;HaplotypeScore=125.7266;InbreedingCoeff=0.8540;MQ=53.49;MQ0=32;MQRankSum=-1.429;QD=27.41;ReadPosRankSum=2.018;VQSLOD=4.0347;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:28:57.20:0,57,1408	0/0:5,0:5:10.58:0,11,172	0/0:36,0:17:42.41:0,42,1027	0/0:41,0:18:36.39:0,36,595	0/0:14,0:13:26.71:0,27,685	1/1:2,17:17:39.03:684,39,0	1/1:4,19:19:33.05:623,33,0	0/0:28,0:28:43.41:0,43,1770	1/1:4,14:18:44.64:806,45,0	0/0:22,0:22:63.22:0,63,1601	0/0:18,0:18:42.14:0,42,1080	0/0:13,0:13:27.09:0,27,637	0/0:23,0:23:48.16:0,48,1229	0/0:18,0:16:30.10:0,30,781	0/0:27,0:26:48.16:0,48,1288	0/0:24,0:24:57.14:0,57,1394	1/1:8,9:16:29.55:398,30,0	0/0:14,0:14:41.43:0,41,895	1/1:0,9:8:24.04:403,24,0	1/1:3,8:11:15.05:262,15,0	1/1:7,6:13:5.76:114,6,0	0/0:20,0:20:42.14:0,42,1084	0/0:14,0:14:26.96:0,27,721	0/0:30,0:28:42.14:0,42,1022	1/1:4,13:15:10.69:225,11,0	0/1:5,4:9:59.94:291,0,60	1/1:7,6:11:4.80:232,5,0	1/1:2,5:7:5.31:237,5,0
chr10	7454820	.	AGAGG	A	1376.34	PASS	AB=0.994;AC=24;AF=0.429;AN=56;BaseQRankSum=6.720;DP=487;FS=28.405;HRun=0;HaplotypeScore=114.6618;InbreedingCoeff=0.5337;MQ=52.25;MQ0=29;MQRankSum=-1.463;QD=5.33;ReadPosRankSum=0.002;VQSLOD=0.5955;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:26.74:0,27,372	0/0:6,0:5:14.97:0,15,127	0/0:26,0:10:13.20:0,13,159	0/1:38,0:16:1.87:2,0,68	0/0:17,4:21:32.84:0,33,279	1/1:21,0:13:20.87:164,21,0	1/1:16,0:13:14.49:127,14,0	0/0:22,0:21:59.85:0,60,521	1/1:18,0:14:21.94:267,22,0	0/1:30,0:30:38.02:38,0,595	0/0:15,0:15:32.82:0,33,312	0/0:18,0:18:28.18:0,28,462	0/0:17,0:15:38.77:0,39,366	0/0:18,0:15:24.05:0,24,331	0/1:14,0:14:46.35:46,0,181	0/1:27,1:28:55.48:55,0,347	1/1:13,0:10:17.75:118,18,0	0/0:7,0:7:4.83:0,5,99	1/1:11,0:7:15.01:171,15,0	1/1:14,0:13:17.95:156,18,0	0/1:9,0:9:14.33:14,0,18	0/0:23,0:21:32.85:0,33,301	0/0:12,0:12:26.22:0,26,238	0/0:19,0:16:26.39:0,26,256	1/1:13,0:7:11.55:105,12,0	0/1:15,0:14:78.52:109,0,79	1/1:16,0:15:10.44:162,10,0	1/1:2,0:2:5.95:44,6,0
chr10	7454824	.	GGAGA	G	247.05	PASS	AB=0.880;AC=16;AF=0.333;AN=48;BaseQRankSum=2.162;DP=486;FS=18.961;HRun=0;HaplotypeScore=115.0424;InbreedingCoeff=0.3922;MQ=50.27;MQ0=32;MQRankSum=-1.329;QD=1.43;ReadPosRankSum=0.192;VQSLOD=1.1840;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:9.45:0,9,97	0/0:7,0:6:0.47:0,0,1	./.	./.	0/0:18,0:19:5.71:0,6,32	1/1:23,0:14:2.63:11,3,0	1/1:13,0:10:2.15:9,2,0	0/0:26,0:23:1.82:0,2,5	1/1:18,0:13:7.77:30,8,0	0/1:31,0:32:9.96:10,0,211	0/0:16,0:16:3:0,3,25	0/0:18,0:18:12.50:0,12,211	0/0:16,0:14:9.03:0,9,140	0/0:18,0:16:11.08:0,11,207	1/1:11,3:14:11.32:136,11,0	0/1:22,7:30:14.57:112,0,15	0/0:13,0:10:2.29:0,2,6	./.	1/1:10,0:6:5.99:53,6,0	1/1:14,0:13:2.75:17,3,0	0/0:8,0:8:2.79:0,3,47	0/0:22,0:20:5.99:0,6,64	0/0:11,0:11:2.99:0,3,24	0/0:20,0:16:5.96:0,6,77	1/1:19,0:13:1.21:9,1,0	0/0:16,0:15:28.49:0,28,321	0/0:17,0:16:7.20:0,7,55	./.
chr10	7454860	.	AG	A	2064.71	PASS	AB=0.836;AC=24;AF=0.429;AN=56;BaseQRankSum=4.180;DP=553;FS=6.766;HRun=1;HaplotypeScore=76.4667;InbreedingCoeff=0.3631;MQ=53.63;MQ0=66;MQRankSum=-0.805;QD=6.70;ReadPosRankSum=2.709;VQSLOD=0.7242;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:30:42.13:0,42,534	0/0:6,0:5:14.99:0,15,170	0/0:11,0:6:17.37:0,17,177	0/0:25,0:15:38.98:0,39,460	0/0:30,0:30:59.21:0,59,710	1/1:16,11:12:18.05:229,18,0	1/1:17,6:17:7.80:72,8,0	0/0:14,0:13:39.12:0,39,491	1/1:18,4:17:11.79:113,12,0	0/0:34,0:34:96.95:0,97,1198	0/0:21,0:20:51.16:0,51,644	0/1:13,6:17:99:115,0,246	0/1:19,1:14:3.93:4,0,156	0/1:17,3:16:32.60:33,0,120	0/0:19,0:19:48.03:0,48,537	0/0:28,0:28:44.13:0,44,472	1/1:3,9:8:18.01:217,18,0	0/0:6,0:6:18.02:0,18,210	1/1:9,7:8:2.75:247,3,0	1/1:10,4:11:8.98:93,9,0	0/1:8,8:11:21.74:143,0,22	0/1:15,3:15:39.45:39,0,97	0/0:20,0:17:11.53:0,12,152	0/1:20,1:15:15.70:16,0,112	1/1:15,7:13:11.27:137,11,0	0/1:35,0:31:99:434,0,113	0/1:6,9:13:99:207,0,121	1/1:1,6:4:12.04:160,12,0
chr10	7454861	.	G	GA	2293.29	PASS	AB=0.753;AC=24;AF=0.429;AN=56;BaseQRankSum=3.643;DP=566;FS=8.853;HRun=1;HaplotypeScore=78.9952;InbreedingCoeff=0.3958;MQ=55.77;MQ0=66;MQRankSum=-0.725;QD=7.26;ReadPosRankSum=2.339;VQSLOD=0.4413;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:30:41.59:0,42,476	0/0:7,0:6:14.94:0,15,169	0/0:12,0:7:16.25:0,16,175	0/0:26,0:16:39.06:0,39,465	0/0:31,0:31:59.48:0,59,710	1/1:21,6:12:17.97:218,18,0	1/1:10,14:19:5.11:66,5,0	0/0:14,0:13:39.08:0,39,462	1/1:9,14:19:10.19:79,10,0	0/0:33,0:33:94.65:0,95,1112	0/0:22,0:21:51.16:0,51,648	0/1:18,1:17:99:118,0,180	0/1:6,13:14:28.92:29,0,86	0/1:12,9:17:49.56:50,0,66	0/0:20,0:20:47.93:0,48,550	0/0:28,0:28:42.89:0,43,480	1/1:12,0:8:17.42:207,17,0	0/0:6,0:6:15.05:0,15,191	0/1:15,1:8:0.40:226,0,0	1/1:5,9:11:8.98:94,9,0	1/1:14,2:11:15.49:185,15,0	0/1:11,9:18:63.03:63,0,96	0/0:5,15:17:11.46:0,11,152	0/1:8,12:15:32.61:33,0,85	1/1:21,1:13:12:128,12,0	0/1:9,27:31:60.72:594,0,61	0/1:14,1:13:56.95:240,0,57	1/1:7,0:4:12.04:160,12,0
chr10	7456582	.	CA	C	3795.45	PASS	AB=0.735;AC=22;AF=0.393;AN=56;BaseQRankSum=1.699;DP=470;FS=0.775;HRun=11;HaplotypeScore=59.2082;InbreedingCoeff=0.8065;MQ=78.88;MQ0=0;MQRankSum=-1.858;QD=17.82;ReadPosRankSum=2.647;VQSLOD=4.6935;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:3,0:20:48.85:0,49,288	0/0:12,0:12:27.07:0,27,288	0/0:15,0:14:23.66:0,24,203	0/1:12,1:12:18.22:18,0,24	0/0:26,1:28:56.39:0,56,783	1/1:1,15:16:41.95:345,42,0	1/1:4,9:13:23.96:197,24,0	0/0:26,0:26:60.14:0,60,631	0/1:2,10:13:28.97:193,0,29	0/0:18,2:21:4.67:0,5,439	0/0:21,0:21:50.19:0,50,564	0/0:4,0:14:23.06:0,23,149	0/0:1,0:15:37.25:0,37,192	0/0:0,0:7:19.92:0,20,100	0/0:21,0:21:51.10:0,51,534	0/0:11,1:12:8.43:0,8,289	1/1:2,22:24:59.93:493,60,0	0/0:6,0:8:20.72:0,21,188	1/1:2,11:13:32.91:266,33,0	1/1:7,22:29:36.92:510,37,0	1/1:2,15:17:12.24:312,12,0	0/0:3,0:13:34.60:0,35,205	0/0:4,0:18:37.45:0,37,207	0/0:1,0:6:14.20:0,14,71	1/1:3,22:25:34.04:485,34,0	1/1:1,14:15:12.96:313,13,0	1/1:0,29:29:68.92:567,69,0	1/1:2,4:6:11.97:99,12,0
chr10	7457093	.	ACTTT	A	3105.58	PASS	AB=0.913;AC=17;AF=0.304;AN=56;BaseQRankSum=0.301;DP=319;FS=6.195;HRun=0;HaplotypeScore=69.9419;InbreedingCoeff=0.4909;MQ=83.40;MQ0=1;MQRankSum=2.960;QD=26.32;ReadPosRankSum=1.920;VQSLOD=2.5043;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:48.72:0,49,651	0/0:5,0:5:5.38:0,5,59	0/0:14,0:14:26.97:0,27,417	0/0:8,0:7:15.05:0,15,252	0/0:12,0:12:29.31:0,29,444	0/1:15,0:15:53.36:400,0,53	0/1:4,0:4:7.91:88,0,8	0/0:32,0:32:87.29:0,87,1494	1/1:7,0:7:1.64:204,2,0	0/0:12,0:12:29.88:0,30,491	0/0:16,0:16:40.99:0,41,599	0/0:8,0:8:14.41:0,14,209	0/0:9,0:9:21.99:0,22,295	0/0:19,0:19:38.97:0,39,614	0/0:10,0:10:21.86:0,22,277	0/0:5,0:5:13.61:0,14,132	0/1:20,0:20:99:466,0,130	0/0:11,0:11:29.69:0,30,451	1/1:0,7:7:21.07:342,21,0	0/1:2,7:9:10:213,0,10	1/1:16,0:16:36.12:574,36,0	0/0:7,0:7:18.05:0,18,275	0/0:6,0:6:12:0,12,160	0/0:5,0:5:6.02:0,6,99	0/1:10,0:10:23.76:244,0,24	1/1:12,0:12:33.11:496,33,0	1/1:6,0:6:12.02:168,12,0	1/1:11,1:12:6.02:94,6,0
chr10	7457098	.	CTTTCTTAT	C	3855.69	PASS	AB=0.968;AC=23;AF=0.411;AN=56;BaseQRankSum=3.538;DP=300;FS=1.066;HRun=0;HaplotypeScore=87.8304;InbreedingCoeff=-0.1392;MQ=78.22;MQ0=1;MQRankSum=-0.307;QD=20.51;ReadPosRankSum=1.821;VQSLOD=2.8874;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:20,0:20:19.91:20,0,587	0/1:3,0:3:13.47:13,0,45	0/0:10,0:10:26.97:0,27,417	0/0:7,0:6:15.05:0,15,252	0/0:13,0:13:10.50:0,10,416	0/1:15,0:15:99:376,0,306	0/1:3,0:3:60.15:88,0,60	0/0:35,0:35:99:0,102,1640	0/1:6,0:6:50.37:202,0,50	0/0:11,0:11:15.43:0,15,458	0/0:14,0:14:4.18:0,4,542	0/1:6,0:6:23.49:23,0,187	0/1:8,0:8:47.91:48,0,259	0/1:17,0:17:26.67:27,0,563	0/1:10,0:10:36.49:36,0,230	0/1:6,0:6:39.52:40,0,88	0/1:20,0:20:99:466,0,561	0/0:10,0:10:12.51:0,13,421	1/1:7,0:7:21.07:342,21,0	0/1:9,0:9:61.75:213,0,62	1/1:14,0:14:36.12:717,36,0	0/0:7,0:7:18.05:0,18,275	0/1:6,0:6:54.50:54,0,135	0/0:5,0:5:7.74:0,8,102	0/1:10,0:10:99:241,0,244	1/1:0,11:11:33.11:681,33,0	1/1:5,0:5:12.02:189,12,0	0/1:1,11:12:10.32:80,0,10
chr10	7457102	.	CTTATTTATTTAT	C	1672.89	PASS	AB=0.778;AC=25;AF=0.500;AN=50;BaseQRankSum=-3.180;DP=281;FS=0.000;HRun=0;HaplotypeScore=113.3583;InbreedingCoeff=0.6018;MQ=73.55;MQ0=1;MQRankSum=-4.073;QD=10.93;ReadPosRankSum=-1.564;VQSLOD=1.9844;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:15,0:21:0.04:0,0,33	1/1:1,1:2:3.01:103,3,0	./.	./.	1/1:8,4:12:12.04:256,12,0	0/0:14,0:14:18.53:0,19,928	0/0:3,0:3:3.01:0,3,174	1/1:27,6:33:17.97:271,18,0	0/0:5,0:5:3.90:0,4,157	1/1:6,4:10:9.02:178,9,0	1/1:11,3:14:9.03:253,9,0	1/1:4,0:5:1.55:4,2,0	1/1:6,0:8:2.44:6,2,0	1/1:11,0:15:0.61:2,1,0	1/1:5,5:10:9.03:308,9,0	1/1:2,4:6:9.03:307,9,0	0/0:18,0:18:28.45:0,28,1527	1/1:10,1:11:2.09:141,2,0	0/0:10,0:10:9.50:0,10,490	0/0:8,0:8:3.01:0,3,142	0/0:12,0:12:12.92:0,13,152	./.	1/1:3,0:6:0.04:1,0,0	0/0:3,0:5:0.47:0,0,1	0/0:8,0:8:12.04:0,12,678	0/0:11,0:11:13.66:0,14,90	0/0:4,0:4:9.03:0,9,152	0/0:12,0:12:6:0,6,138
chr10	7460012	.	C	CT	6017.43	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-10.986;DP=566;FS=14.121;HRun=8;HaplotypeScore=48.5900;InbreedingCoeff=0.9745;MQ=62.62;MQ0=11;MQRankSum=0.386;QD=27.73;ReadPosRankSum=2.657;VQSLOD=4.1836;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:90.05:0,90,823	0/0:5,0:5:15.01:0,15,137	0/0:46,0:12:17.97:0,18,154	0/0:29,0:9:8.24:0,8,50	0/0:32,0:32:96.02:0,96,871	1/1:1,11:12:33.10:380,33,0	1/1:3,5:7:15.04:173,15,0	0/0:45,0:42:99:0,114,1042	1/1:0,13:13:36.11:415,36,0	0/0:23,0:22:63.03:0,63,576	0/0:24,0:24:63.01:0,63,572	0/0:5,0:5:15.01:0,15,137	0/0:7,0:7:18.01:0,18,165	0/0:11,0:11:29.98:0,30,265	0/0:9,0:9:21:0,21,188	0/0:10,0:10:24.01:0,24,219	1/1:4,35:38:94.52:1076,95,0	0/0:18,0:18:38.99:0,39,357	1/1:9,25:28:66.20:761,66,0	1/1:6,25:31:75.17:841,75,0	1/1:1,7:8:18.05:208,18,0	0/0:15,0:15:33.01:0,33,302	0/0:21,0:20:60.02:0,60,544	0/0:18,0:18:51:0,51,461	1/1:3,20:23:60.18:692,60,0	1/1:4,20:24:38.71:684,39,0	1/1:2,19:21:57.16:648,57,0	1/1:0,4:4:12.04:138,12,0
chr10	7460289	.	CTCAGGG	C	14232.79	PASS	AB=0.570;AC=32;AF=0.571;AN=56;BaseQRankSum=16.384;DP=511;FS=21.399;HRun=0;HaplotypeScore=132.9310;InbreedingCoeff=0.8252;MQ=52.29;MQ0=0;MQRankSum=-16.685;QD=52.71;ReadPosRankSum=2.612;VQSLOD=3.5022;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:60.19:0,60,2006	0/0:13,0:13:36.12:0,36,1219	0/0:23,0:21:63.22:0,63,1996	0/0:21,0:19:34.58:0,35,1525	0/0:33,0:33:99:0,99,3367	1/1:2,21:23:57.20:1339,57,0	1/1:0,12:7:21.07:463,21,0	0/0:22,0:21:60.21:0,60,2083	1/1:0,22:22:51.18:1204,51,0	0/0:22,0:22:66.22:0,66,2158	0/0:17,0:17:48.16:0,48,1570	1/1:1,9:10:24.08:566,24,0	1/1:1,16:17:42.14:991,42,0	1/1:2,11:13:36.12:849,36,0	0/0:23,0:23:60.21:0,60,2116	0/0:18,0:18:54.19:0,54,1848	0/1:3,7:9:48.57:404,0,49	0/0:27,0:27:75.26:0,75,2668	1/1:4,17:19:42.10:941,42,0	1/1:1,14:15:36.08:751,36,0	1/1:2,7:9:12.04:182,12,0	1/1:0,12:12:36.12:817,36,0	1/1:1,18:19:51.17:1099,51,0	1/1:5,10:15:27.09:597,27,0	1/1:1,19:20:48.16:1133,48,0	0/1:5,22:27:99:1411,0,349	1/1:1,21:22:60.21:1416,60,0	1/1:2,1:3:3.01:71,3,0
chr10	7460535	.	TA	T	1817.85	PASS	AB=0.930;AC=12;AF=0.214;AN=56;BaseQRankSum=-2.248;DP=496;FS=2.684;HRun=2;HaplotypeScore=80.1041;InbreedingCoeff=0.3769;MQ=62.52;MQ0=1;MQRankSum=0.142;QD=10.63;ReadPosRankSum=1.419;VQSLOD=1.9138;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:24:5.31:77,0,5	0/0:6,0:6:18.06:0,18,269	0/0:18,0:13:33.82:0,34,377	0/0:22,0:21:55.15:0,55,712	0/0:22,0:22:66.18:0,66,908	0/1:23,0:23:20.55:21,0,90	0/1:20,0:20:16.84:17,0,101	0/0:27,0:27:75.22:0,75,1064	0/0:12,0:12:7.28:0,7,80	0/0:11,0:11:33.07:0,33,421	0/0:11,0:11:33.09:0,33,434	0/0:11,0:11:4.10:0,4,67	0/0:13,0:13:6.01:0,6,85	0/0:16,0:16:17.43:0,17,125	0/0:15,0:15:45.14:0,45,652	0/0:15,0:15:45.14:0,45,652	0/0:39,0:39:56.95:0,57,326	0/0:19,0:19:57.08:0,57,757	0/0:12,0:13:26.19:0,26,82	0/0:29,0:29:12.88:0,13,176	1/1:1,19:20:36.03:428,36,0	0/0:9,0:9:21.33:0,21,86	0/0:17,0:17:31.23:0,31,131	0/1:22,0:22:16.69:17,0,126	0/1:12,0:12:1.68:2,0,53	0/1:3,8:11:38.75:300,0,39	1/1:1,24:25:57.18:733,57,0	1/1:0,14:14:30.10:388,30,0
chr10	7460537	.	AT	A	996.24	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=5.299;DP=498;FS=2.909;HRun=8;HaplotypeScore=84.2379;InbreedingCoeff=0.8516;MQ=62.54;MQ0=1;MQRankSum=2.257;QD=10.49;ReadPosRankSum=4.505;VQSLOD=2.4113;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,21:24:57.09:550,57,0	0/0:7,0:7:21.02:0,21,237	0/0:16,1:12:19.18:0,19,269	0/0:21,0:20:50.15:0,50,551	0/0:23,0:23:60.10:0,60,692	0/0:23,0:23:56.93:0,57,582	0/0:19,0:19:50.98:0,51,583	0/0:26,0:26:66.19:0,66,786	0/0:12,0:12:36.09:0,36,420	0/0:12,0:12:30.09:0,30,353	0/0:10,0:10:27.04:0,27,291	0/0:11,0:11:30.09:0,30,361	0/0:13,0:13:36.10:0,36,422	0/0:17,0:17:48.06:0,48,546	0/0:15,0:15:45.13:0,45,534	0/0:15,0:15:42.13:0,42,507	0/0:39,0:39:98.25:0,98,1197	0/0:18,0:18:54.17:0,54,649	0/0:13,0:13:39.05:0,39,415	0/0:29,0:29:81.15:0,81,905	1/1:20,0:20:16.36:134,16,0	0/0:10,0:10:29.96:0,30,302	0/0:17,0:17:50.87:0,51,544	0/0:22,0:22:51.60:0,52,598	0/0:14,0:14:35.99:0,36,382	0/1:11,0:11:10.84:90,0,11	1/1:25,0:25:33.64:263,34,0	1/1:15,0:15:7.82:120,8,0
chr10	7461649	.	TC	T	4571.83	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=12.111;DP=578;FS=5.435;HRun=1;HaplotypeScore=61.2743;InbreedingCoeff=0.9966;MQ=86.31;MQ0=0;MQRankSum=-3.092;QD=36.87;ReadPosRankSum=3.808;VQSLOD=5.2244;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,102,1561	0/0:10,0:10:30.06:0,30,452	0/0:26,0:26:78.24:0,78,1220	0/0:24,0:24:72.23:0,72,1092	0/0:21,0:21:63.18:0,63,959	0/0:17,0:17:48.14:0,48,716	0/0:20,0:20:60.20:0,60,959	0/0:23,0:23:69.24:0,69,1101	0/0:27,0:27:78.24:0,78,1201	0/0:23,0:23:63.21:0,63,985	0/0:20,0:20:51.16:0,51,791	1/1:0,19:19:51.17:713,51,0	1/1:0,21:21:60.20:838,60,0	1/1:0,16:16:42.14:587,42,0	0/0:25,0:25:75.26:0,75,1199	0/0:17,0:17:51.17:0,51,813	0/0:15,0:15:45.13:0,45,693	0/0:5,0:5:15.01:0,15,212	0/0:21,0:20:60.20:0,60,936	0/0:17,0:17:48.16:0,48,759	0/0:29,0:29:87.26:0,87,1340	1/1:0,26:26:69.23:965,69,0	1/1:0,24:24:60.18:839,60,0	1/1:0,18:18:45.15:629,45,0	0/0:15,0:15:45.10:0,45,646	0/0:26,0:26:78.25:0,78,1207	0/0:28,0:28:79.15:0,79,1249	0/0:11,0:11:33.09:0,33,502
chr10	7462173	.	CTTTCCTAAGAGACTA	C	14410.46	PASS	AB=0.558;AC=20;AF=0.357;AN=56;BaseQRankSum=15.076;DP=507;FS=2.941;HRun=0;HaplotypeScore=209.9874;InbreedingCoeff=0.8010;MQ=71.19;MQ0=1;MQRankSum=-14.401;QD=86.81;ReadPosRankSum=3.996;VQSLOD=4.7996;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:69.22:0,69,4475	0/0:6,0:6:18.06:0,18,1311	0/0:15,0:13:27.09:0,27,1332	0/0:14,0:13:33.11:0,33,2054	0/0:36,0:36:99:0,108,7476	1/1:2,16:18:42.14:1839,42,0	1/1:2,5:7:15.05:657,15,0	0/0:41,0:41:99:0,102,6402	0/1:2,17:19:99:1793,0,176	0/0:32,0:32:87.30:0,87,6050	0/0:30,0:30:90.31:0,90,6082	0/0:13,0:13:36.12:0,36,2618	0/0:19,0:19:51.15:0,51,3076	0/0:17,0:17:51.15:0,51,3561	0/0:22,0:22:63.22:0,63,4595	0/0:11,0:11:24.08:0,24,1712	1/1:4,5:9:3.01:131,3,0	0/0:11,0:11:18.06:0,18,957	1/1:5,11:16:33.07:1069,33,0	1/1:4,19:23:51.18:2232,51,0	1/1:4,7:11:18.06:694,18,0	0/0:24,0:24:63.18:0,63,4009	0/0:18,0:18:54.14:0,54,3786	0/0:8,0:8:24.04:0,24,1398	1/1:0,21:21:54.19:2364,54,0	0/1:6,14:20:99:1794,0,176	1/1:3,12:15:33.11:1444,33,0	1/1:4,3:7:9.03:394,9,0
chr10	7462800	.	GA	G	567.29	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=0.610;DP=549;FS=2.033;HRun=2;HaplotypeScore=71.6938;InbreedingCoeff=0.9969;MQ=83.71;MQ0=0;MQRankSum=-3.740;QD=33.37;ReadPosRankSum=1.445;VQSLOD=3.8809;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,17:17:51.17:662,51,0	0/0:10,0:10:30.10:0,30,450	0/0:20,0:20:56.92:0,57,773	0/0:13,0:13:35.43:0,35,439	0/0:33,0:33:93.28:0,93,1330	0/0:24,0:24:72.24:0,72,1061	0/0:12,0:12:36.11:0,36,520	0/0:32,0:32:90.25:0,90,1272	0/0:24,0:24:69.22:0,69,1014	0/0:30,0:30:87.29:0,87,1305	0/0:19,0:19:54.18:0,54,807	0/0:10,0:10:30.10:0,30,450	0/0:17,0:17:51.17:0,51,762	0/0:16,0:16:48.16:0,48,719	0/0:19,0:19:57.19:0,57,854	0/0:16,0:16:48.16:0,48,720	0/0:12,0:12:36.11:0,36,519	0/0:10,0:10:30.10:0,30,441	0/0:27,0:27:81.26:0,81,1193	0/0:23,0:23:69.23:0,69,1034	0/0:16,0:16:48.15:0,48,697	0/0:24,0:24:72.24:0,72,1060	0/0:25,0:25:75.25:0,75,1124	0/0:12,0:12:36.11:0,36,519	0/0:28,0:28:84.26:0,84,1237	0/0:25,0:25:75.25:0,75,1125	0/0:26,0:26:78.25:0,78,1149	0/0:9,0:9:27.09:0,27,405
chr10	7463290	.	CAACCT	C	732.03	PASS	AB=0.938;AC=8;AF=0.148;AN=54;BaseQRankSum=4.311;DP=292;FS=30.385;HRun=0;HaplotypeScore=68.6003;InbreedingCoeff=0.2763;MQ=84.66;MQ0=2;MQRankSum=-4.749;QD=12.41;ReadPosRankSum=2.326;VQSLOD=1.1648;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:36.05:0,36,698	0/0:1,0:1:3.01:0,3,56	0/0:28,0:21:48.07:0,48,1301	0/0:17,0:13:10.61:0,11,713	0/0:7,0:7:5.98:0,6,89	0/0:10,0:9:23.74:0,24,225	0/1:14,0:14:27.86:28,0,52	0/0:18,0:17:51.17:0,51,1082	0/1:12,0:12:13.27:13,0,27	0/0:11,0:11:33.04:0,33,576	0/0:5,0:5:15.04:0,15,330	0/0:7,0:7:21.07:0,21,454	0/0:3,0:3:9.03:0,9,188	0/0:13,0:13:32.12:0,32,850	0/0:14,0:14:17.94:0,18,371	0/0:6,0:6:15.02:0,15,296	0/1:10,0:10:12.93:13,0,116	0/0:11,0:10:11.93:0,12,229	0/0:6,0:6:13.55:0,14,120	0/0:2,0:2:5.93:0,6,40	./.	0/0:8,0:8:18.05:0,18,431	0/0:7,0:7:13.29:0,13,298	0/0:21,0:21:29.28:0,29,715	0/0:9,0:9:4.55:0,5,32	0/1:8,3:12:29.09:471,0,29	1/1:4,2:6:12.04:196,12,0	1/1:5,0:5:9.03:148,9,0
chr10	7463291	.	AACCTC	A	1173.56	PASS	AB=0.932;AC=12;AF=0.231;AN=52;BaseQRankSum=3.464;DP=289;FS=57.505;HRun=0;HaplotypeScore=65.7089;InbreedingCoeff=0.4734;MQ=83.47;MQ0=2;MQRankSum=-5.545;QD=16.53;ReadPosRankSum=1.868;VQSLOD=1.0461;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:35.50:0,35,518	0/0:1,0:1:3.01:0,3,39	0/0:31,0:21:56.21:0,56,1309	0/0:16,0:12:26.79:0,27,664	0/0:7,0:7:3.01:0,3,54	0/0:9,0:9:3.51:0,4,59	0/1:12,0:13:7.18:64,0,7	0/0:18,0:17:51.16:0,51,816	1/1:11,0:12:10.24:66,10,0	0/0:11,0:11:32.81:0,33,479	0/0:4,0:4:12.04:0,12,295	0/0:7,0:7:21:0,21,385	0/0:3,0:3:9.03:0,9,132	0/0:13,0:13:32.12:0,32,818	0/0:14,0:14:17.81:0,18,250	0/0:6,0:6:15.02:0,15,277	0/1:10,0:10:11.26:68,0,11	0/0:11,0:10:11.78:0,12,137	0/1:4,0:4:4.66:5,0,15	./.	./.	0/0:7,0:7:15.05:0,15,387	0/0:7,0:7:15.04:0,15,313	0/0:21,0:21:29.24:0,29,700	1/1:8,0:9:11.95:71,12,0	0/1:9,3:12:26.79:608,0,27	1/1:2,3:6:12.04:239,12,0	1/1:0,5:5:9.03:209,9,0
chr10	7463292	.	ACCTC	A	1303.24	PASS	AB=1.000;AC=22;AF=0.423;AN=52;BaseQRankSum=5.249;DP=286;FS=51.388;HRun=0;HaplotypeScore=60.3090;InbreedingCoeff=0.6703;MQ=82.15;MQ0=4;MQRankSum=-6.368;QD=13.58;ReadPosRankSum=1.504;VQSLOD=1.2486;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:10.29:0,10,211	1/1:1,0:1:0.89:2,1,0	0/0:31,0:21:47.26:0,47,952	0/0:17,0:11:26.63:0,27,418	0/0:7,0:7:3.01:0,3,36	1/1:4,4:7:17.80:120,18,0	1/1:3,9:12:14.01:185,14,0	0/0:18,0:17:0.58:0,1,208	1/1:3,9:12:14.92:173,15,0	0/1:11,0:11:27.25:27,0,94	0/0:5,0:4:12:0,12,146	0/0:6,0:6:12.03:0,12,200	0/0:3,0:3:8.95:0,9,69	0/0:13,0:13:32.04:0,32,530	0/0:13,0:13:11.55:0,12,100	0/1:6,0:6:7.18:7,0,90	1/1:6,0:10:23.91:234,24,0	0/0:10,0:9:5.76:0,6,46	1/1:1,3:4:5.99:76,6,0	./.	./.	0/0:7,0:7:15.03:0,15,237	0/0:7,0:7:14.98:0,15,200	0/0:21,0:21:25.44:0,25,441	1/1:1,8:9:17.89:194,18,0	1/1:12,0:12:10.74:262,11,0	1/1:6,0:6:11.97:116,12,0	1/1:5,0:5:9.02:93,9,0
chr10	7463301	.	CCCCCA	C	586.75	PASS	AB=0.982;AC=26;AF=0.500;AN=52;BaseQRankSum=4.999;DP=285;FS=34.609;HRun=0;HaplotypeScore=70.2940;InbreedingCoeff=0.2040;MQ=72.74;MQ0=19;MQRankSum=-4.111;QD=3.60;ReadPosRankSum=4.995;VQSLOD=-0.2685;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:20,0:19:27.79:39,0,28	1/1:1,0:1:2.90:16,3,0	0/0:32,0:16:43.37:0,43,910	0/0:19,0:10:21.50:0,22,359	./.	1/1:9,0:8:0.38:15,0,0	0/1:10,2:12:23.24:80,0,23	0/1:19,0:14:17.12:82,0,17	1/1:10,2:12:5.98:73,6,0	0/1:13,0:11:19.66:56,0,20	0/0:5,0:4:11.61:0,12,77	0/0:5,0:4:9.03:0,9,141	0/0:2,0:2:0.47:0,0,1	0/0:12,0:12:27.56:0,28,323	0/1:10,0:10:0.01:0,0,0	0/1:7,0:7:9.79:10,0,56	0/1:9,0:9:20.10:66,0,20	0/1:9,0:8:11.84:15,0,12	1/1:7,0:5:1.77:18,2,0	1/1:4,0:3:2.97:20,3,0	./.	0/0:8,0:7:13.34:0,13,123	0/0:7,0:6:9.92:0,10,164	0/0:21,0:21:26.24:0,26,297	1/1:10,0:9:4.22:78,4,0	1/1:10,0:10:10.05:90,10,0	1/1:6,0:5:8.33:70,8,0	1/1:5,0:5:3.11:17,3,0
chr10	7463302	.	CCCCA	C	1502.50	PASS	AB=0.842;AC=31;AF=0.596;AN=52;BaseQRankSum=0.388;DP=282;FS=23.285;HRun=0;HaplotypeScore=64.7353;InbreedingCoeff=0.4756;MQ=71.24;MQ0=20;MQRankSum=-2.337;QD=9.27;ReadPosRankSum=3.515;VQSLOD=0.8531;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:2,0:19:5.99:73,6,0	1/1:1,0:1:3.01:53,3,0	0/0:31,0:15:43.56:0,44,652	0/0:19,0:10:21.11:0,21,248	./.	0/1:8,0:7:0.09:15,0,0	1/1:13,0:12:1.93:73,2,0	1/1:6,12:13:33.06:486,33,0	1/1:12,0:12:6.01:65,6,0	1/1:2,10:10:30.03:395,30,0	1/1:5,0:4:2.96:24,3,0	0/0:5,0:4:8.94:0,9,66	0/0:1,0:1:0.47:0,0,1	0/0:12,0:12:26.93:0,27,179	0/1:1,9:10:0.01:0,0,0	1/1:7,0:7:10.18:143,10,0	0/1:9,0:9:17.62:59,0,18	1/1:2,7:8:3.86:23,4,0	1/1:7,0:5:4.01:23,4,0	1/1:4,0:3:2.97:20,3,0	./.	0/0:8,0:7:0.86:0,1,47	0/0:7,0:6:0.96:0,1,73	0/0:21,0:21:25.61:0,26,173	1/1:10,0:9:5.14:71,5,0	1/1:11,0:11:15.54:92,16,0	1/1:6,0:5:0.67:44,1,0	0/0:5,0:5:4.36:0,4,19
chr10	7463344	.	AGAGAGAGAGAGGGAGAGG	A	1301.52	PASS	AB=1.000;AC=23;AF=0.426;AN=54;BaseQRankSum=4.054;DP=275;FS=17.935;HRun=0;HaplotypeScore=105.5984;InbreedingCoeff=0.4579;MQ=43.73;MQ0=20;MQRankSum=-2.885;QD=11.03;ReadPosRankSum=1.721;VQSLOD=0.7054;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:20:36.17:0,36,733	0/0:4,0:4:3.01:0,3,52	0/0:12,0:6:16.47:0,16,245	0/0:14,0:4:6.02:0,6,132	0/0:11,0:9:9.03:0,9,229	1/1:6,1:6:5.89:201,6,0	1/1:13,0:11:0.59:14,1,0	0/0:16,0:11:22.07:0,22,248	0/0:9,0:8:3.63:0,4,10	0/0:15,0:13:35.33:0,35,1085	0/0:10,0:10:16.77:0,17,615	1/1:5,0:5:2.98:21,3,0	1/1:9,0:9:7.49:83,7,0	1/1:11,0:11:3.01:33,3,0	0/0:5,0:5:5.03:0,5,81	0/0:5,0:5:10.22:0,10,175	1/1:6,2:7:14.48:197,14,0	0/0:11,0:8:14.94:0,15,347	1/1:7,0:5:5.90:40,6,0	1/1:9,1:8:5.74:191,6,0	0/0:8,0:5:0:0,0,0	1/1:11,0:11:1.06:13,1,0	0/0:8,0:7:2.37:0,2,8	0/1:17,0:17:7.82:74,0,8	./.	0/1:11,0:11:90.05:463,0,90	1/1:7,0:6:11.95:125,12,0	0/1:2,0:2:13.06:14,0,13
chr10	7463354	.	AGGGAGAGGGAGAGG	A	1009.13	PASS	AB=1.000;AC=18;AF=0.333;AN=54;BaseQRankSum=4.342;DP=292;FS=1.079;HRun=0;HaplotypeScore=107.5028;InbreedingCoeff=0.2535;MQ=48.44;MQ0=16;MQRankSum=-1.844;QD=8.85;ReadPosRankSum=0.872;VQSLOD=1.4771;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:40.20:0,40,910	0/0:4,0:4:2.77:0,3,77	0/0:23,0:11:24.44:0,24,604	0/0:21,0:10:16.77:0,17,321	0/0:10,0:9:12.04:0,12,302	0/1:7,0:6:25.97:92,0,26	0/0:14,0:12:4.45:0,4,14	0/1:11,0:11:6.29:6,0,167	0/0:9,0:8:8.95:0,9,68	0/0:14,0:12:13.80:0,14,936	0/0:12,0:13:27.01:0,27,763	1/1:2,0:3:3.01:38,3,0	1/1:4,4:8:12.24:302,12,0	1/1:1,9:11:3.01:48,3,0	0/0:6,0:6:11.95:0,12,243	0/1:5,0:5:10.34:10,0,159	0/1:9,0:8:44.45:82,0,44	0/0:12,0:9:17.31:0,17,354	0/0:7,0:5:11.91:0,12,84	1/1:12,0:10:5.11:107,5,0	0/0:9,0:6:2.74:0,3,12	1/1:9,0:11:1.07:29,1,0	0/0:5,4:7:2.99:0,3,23	1/1:17,1:18:10.69:175,11,0	./.	0/1:11,0:11:99:231,0,101	0/1:8,0:8:16.18:49,0,16	0/0:2,0:2:5.93:0,6,40
chr10	7463359	.	G	GAT	349.82	PASS	AB=1.000;AC=16;AF=0.296;AN=54;BaseQRankSum=5.907;DP=297;FS=9.225;HRun=0;HaplotypeScore=87.1334;InbreedingCoeff=0.1611;MQ=53.01;MQ0=15;MQRankSum=-1.850;QD=3.30;ReadPosRankSum=-3.421;VQSLOD=0.3506;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:36.07:0,36,479	0/0:4,0:4:5.99:0,6,68	0/0:27,0:12:0.93:0,1,276	0/0:24,0:12:19.47:0,19,301	0/0:12,0:11:12.04:0,12,177	0/0:8,0:7:4.65:0,5,31	0/1:13,0:11:5.72:33,0,6	0/0:9,0:9:22.04:0,22,177	1/1:10,0:9:1.77:4,2,0	0/0:17,0:15:35.76:0,36,420	0/0:12,0:12:24.08:0,24,365	1/1:3,0:3:3.01:40,3,0	0/1:6,0:6:37.44:38,0,37	1/1:10,1:11:3.01:47,3,0	0/0:7,0:7:9.50:0,10,139	0/0:5,0:5:8.92:0,9,84	0/1:10,0:9:17.07:17,0,58	0/0:12,0:10:23.52:0,24,234	0/1:7,0:5:44.81:47,0,45	0/0:11,0:10:5.80:0,6,33	0/0:8,0:5:2.92:0,3,17	1/1:11,0:11:0.45:1,0,0	0/0:7,1:6:2.98:0,3,21	1/1:11,7:18:11.67:176,12,0	./.	0/1:11,0:11:60.97:61,0,135	0/1:6,0:6:29.43:30,0,29	0/0:2,0:2:2.74:0,3,12
chr10	7463385	.	CACAG	C	1565.38	PASS	AC=18;AF=0.346;AN=52;BaseQRankSum=5.891;DP=312;FS=4.591;HRun=0;HaplotypeScore=96.6798;InbreedingCoeff=0.8096;MQ=58.32;MQ0=5;MQRankSum=-4.674;QD=19.57;ReadPosRankSum=-0.368;VQSLOD=2.5776;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:42.07:0,42,919	0/0:4,0:4:6.02:0,6,146	0/0:38,0:16:12.04:0,12,262	0/0:30,0:19:24.08:0,24,553	0/0:12,0:12:18.06:0,18,437	1/1:2,7:9:21:313,21,0	1/1:8,6:13:5.55:98,6,0	0/0:12,0:12:18.02:0,18,378	1/1:4,7:10:15.05:245,15,0	0/0:13,0:13:30.10:0,30,687	0/0:14,0:14:33.10:0,33,752	0/0:6,0:6:12.01:0,12,125	0/0:7,0:8:11.99:0,12,120	0/0:12,0:12:5.98:0,6,49	0/0:5,0:5:12.04:0,12,293	0/0:5,0:5:12.04:0,12,292	1/1:3,6:9:15.05:246,15,0	0/0:9,0:8:21.07:0,21,512	./.	1/1:3,6:9:14.97:213,15,0	1/1:5,4:8:3.01:49,3,0	0/0:7,0:7:6.01:0,6,58	0/0:9,0:9:2.99:0,3,24	0/0:17,0:18:11.61:0,12,106	1/1:1,2:3:6.02:98,6,0	1/1:3,6:9:18.06:295,18,0	1/1:1,6:7:12.04:197,12,0	./.
chr10	7465527	.	G	GT	266.81	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=0.696;DP=524;FS=10.289;HRun=6;HaplotypeScore=62.9874;InbreedingCoeff=0.9500;MQ=73.56;MQ0=0;MQRankSum=-2.904;QD=17.79;ReadPosRankSum=-1.659;VQSLOD=2.1625;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,12:15:32.98:361,33,0	0/0:11,0:11:30.07:0,30,306	0/0:19,0:18:48.10:0,48,485	0/0:13,0:13:11.72:0,12,198	0/0:29,0:29:84.17:0,84,851	0/0:13,0:13:39.09:0,39,398	0/0:19,0:19:54.09:0,54,537	0/0:40,0:40:99:0,99,990	0/0:21,0:21:57.11:0,57,575	0/0:32,0:32:92.53:0,93,904	0/0:25,0:25:69.14:0,69,698	0/0:15,0:15:33.06:0,33,329	0/0:18,0:18:51.09:0,51,503	0/0:19,0:19:51.10:0,51,509	0/0:16,0:16:45.09:0,45,452	0/0:7,0:7:21.05:0,21,214	0/0:19,0:19:37.16:0,37,476	0/0:23,0:23:62.99:0,63,618	0/0:23,0:23:66.15:0,66,673	0/0:27,0:27:72.16:0,72,734	0/0:13,0:13:33.07:0,33,337	0/0:9,0:9:21.04:0,21,210	0/0:26,0:26:72.14:0,72,719	0/0:7,0:7:18.03:0,18,180	0/0:17,0:17:48.11:0,48,490	0/0:21,0:21:57.12:0,57,581	0/0:18,0:18:51.10:0,51,514	0/0:9,0:9:24.01:0,24,234
chr10	7466333	.	ATGT	A	11362.65	PASS	AB=0.660;AC=21;AF=0.375;AN=56;BaseQRankSum=13.340;DP=710;FS=0.291;HRun=0;HaplotypeScore=108.5377;InbreedingCoeff=0.8067;MQ=70.84;MQ0=0;MQRankSum=-6.420;QD=42.08;ReadPosRankSum=2.360;VQSLOD=6.0394;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:57:99:0,159,3477	0/0:6,0:6:18.06:0,18,425	0/0:42,0:42:99:0,119,2642	0/0:36,0:36:99:0,105,2300	0/0:36,0:36:99:0,108,2369	1/1:0,22:22:60.12:992,60,0	0/1:1,21:22:9.87:812,0,10	0/0:28,0:28:81.27:0,81,1867	1/1:0,23:23:63.17:1067,63,0	0/0:31,0:31:93.32:0,93,2196	0/0:30,0:30:90.26:0,90,1963	0/0:23,0:23:66.21:0,66,1515	0/0:19,0:19:57.20:0,57,1347	0/0:30,0:30:87.30:0,87,2056	0/0:21,0:21:60.19:0,60,1372	0/1:16,1:17:1.76:2,0,1034	1/1:1,16:17:45.15:792,45,0	0/0:15,0:15:45.13:0,45,1014	1/1:0,22:22:66.22:1127,66,0	1/1:0,36:35:99:1707,105,0	1/1:1,14:15:36.08:602,36,0	0/0:29,0:29:87.30:0,87,2057	0/0:21,0:21:63.18:0,63,1395	0/0:16,0:16:45.15:0,45,1045	1/1:0,22:22:60.12:992,60,0	0/1:2,20:22:75.74:938,0,76	1/1:0,29:29:69.06:1202,69,0	1/1:0,23:23:66.18:1131,66,0
chr10	7466511	.	ATTCT	A	2179.66	PASS	AB=0.736;AC=3;AF=0.054;AN=56;BaseQRankSum=6.649;DP=697;FS=0.000;HRun=0;HaplotypeScore=125.9111;InbreedingCoeff=-0.0568;MQ=88.79;MQ0=0;MQRankSum=6.146;QD=15.46;ReadPosRankSum=-1.669;VQSLOD=2.7212;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:21,18:39:99:668,0,1187	0/0:13,0:13:39.13:0,39,1051	0/1:39,18:55:99:946,0,2084	0/1:31,13:45:99:665,0,1563	0/0:33,0:33:99:0,99,2631	0/0:20,0:20:60.19:0,60,1542	0/0:16,0:16:45.15:0,45,1232	0/0:35,0:35:99:0,102,2725	0/0:23,0:23:66.23:0,66,1791	0/0:14,0:14:42.14:0,42,1091	0/0:28,0:28:78.27:0,78,2125	0/0:26,0:26:75.26:0,75,2022	0/0:17,0:17:48.16:0,48,1300	0/0:25,0:25:72.25:0,72,1890	0/0:26,0:26:78.27:0,78,2054	0/0:13,0:13:36.11:0,36,902	0/0:20,0:20:57.20:0,57,1554	0/0:7,0:7:21.07:0,21,572	0/0:25,0:25:72.20:0,72,1904	0/0:30,0:30:90.31:0,90,2414	0/0:18,0:18:51.17:0,51,1397	0/0:17,0:17:48.16:0,48,1285	0/0:27,0:27:78.25:0,78,2064	0/0:14,0:14:39.13:0,39,1012	0/0:22,0:21:63.22:0,63,1689	0/0:31,0:31:90.31:0,90,2427	0/0:28,0:28:81.28:0,81,2137	0/0:28,0:28:79.15:0,79,2097
chr10	7466659	.	A	AT	5441.86	PASS	AB=0.873;AC=36;AF=0.643;AN=56;BaseQRankSum=-8.856;DP=610;FS=0.000;HRun=13;HaplotypeScore=73.6692;InbreedingCoeff=0.7100;MQ=70.15;MQ0=0;MQRankSum=-0.154;QD=12.90;ReadPosRankSum=0.719;VQSLOD=5.0034;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:35:45.21:0,45,131	0/0:6,0:7:10.91:0,11,66	0/0:26,2:25:7.13:0,7,80	0/1:21,0:20:5.99:6,0,79	0/0:34,0:38:58.68:0,59,512	1/1:3,16:20:33.38:440,33,0	1/1:1,18:19:27.47:397,27,0	0/1:31,2:34:0.24:0,0,277	1/1:3,14:18:29.20:301,29,0	0/0:25,1:27:36.60:0,37,388	0/0:25,0:26:54.32:0,54,361	1/1:4,12:16:33:299,33,0	1/1:4,19:23:6.45:202,6,0	1/1:3,11:15:20.86:182,21,0	0/0:12,0:12:23.67:0,24,161	0/1:10,1:12:7.12:7,0,102	1/1:6,9:15:27.92:253,28,0	0/0:14,0:15:37.74:0,38,253	1/1:10,15:27:0.98:407,1,0	1/1:16,21:38:21.65:458,22,0	1/1:2,6:8:12.01:111,12,0	1/1:7,15:23:25.56:359,26,0	1/1:7,22:30:30.31:412,30,0	0/1:4,6:10:2.56:121,0,3	1/1:3,18:23:36.15:454,36,0	1/1:3,18:24:44.99:519,45,0	1/1:6,24:31:30.26:403,30,0	1/1:8,4:13:12.01:111,12,0
chr10	7467054	.	AGTGTGTGT	A	7940.88	PASS	AB=0.772;AC=28;AF=0.500;AN=56;BaseQRankSum=4.692;DP=626;FS=2.742;HRun=0;HaplotypeScore=177.3244;InbreedingCoeff=0.7974;MQ=53.66;MQ0=18;MQRankSum=-10.179;QD=29.30;ReadPosRankSum=1.354;VQSLOD=4.2468;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:34:21.05:0,21,660	1/1:4,6:10:16.30:383,16,0	0/0:51,0:30:12.01:0,12,219	0/0:49,0:27:6.02:0,6,183	1/1:7,24:30:51.07:1097,51,0	0/0:19,0:25:33.10:0,33,1044	0/0:12,0:23:26.87:0,27,823	1/1:15,11:25:4.37:538,4,0	0/0:12,0:26:41.81:0,42,1517	1/1:10,18:27:54.12:1148,54,0	1/1:9,15:27:44.47:958,44,0	1/1:3,0:14:30.10:559,30,0	1/1:4,0:17:21.07:391,21,0	1/1:4,0:13:18.06:335,18,0	1/1:4,13:17:33.11:838,33,0	1/1:1,9:11:21.07:513,21,0	0/0:8,0:18:15.09:0,15,502	0/1:9,1:11:99:117,0,210	0/0:17,0:21:30.10:0,30,1071	0/0:8,0:18:35.87:0,36,1113	0/0:15,0:23:30.09:0,30,549	1/1:7,0:16:20.56:345,21,0	1/1:10,0:22:27.09:503,27,0	1/1:2,0:4:6.02:112,6,0	0/0:9,0:20:32.22:0,32,1083	0/1:13,2:23:99:104,0,848	0/0:9,0:20:36.10:0,36,658	0/0:9,0:21:42.11:0,42,901
chr10	7468028	.	AT	A	1174.55	PASS	AB=0.917;AC=3;AF=0.054;AN=56;BaseQRankSum=4.780;DP=595;FS=1.061;HRun=10;HaplotypeScore=69.7524;InbreedingCoeff=0.6045;MQ=68.51;MQ0=0;MQRankSum=-0.473;QD=11.75;ReadPosRankSum=1.139;VQSLOD=3.3134;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,56:67:99:1269,120,0	0/0:8,0:9:26.91:0,27,280	0/0:23,0:25:53.46:0,53,488	0/0:33,0:31:30.09:0,30,501	0/0:21,0:21:51.14:0,51,564	0/0:24,1:25:40.12:0,40,671	0/0:18,0:20:56.81:0,57,585	0/0:33,1:34:49.12:0,49,753	0/0:25,0:25:66.17:0,66,722	0/0:25,1:26:40.11:0,40,658	0/0:22,0:22:57.10:0,57,610	0/0:10,1:11:0.99:0,1,226	0/0:18,1:19:28.11:0,28,538	0/0:16,0:17:41.95:0,42,445	0/0:21,2:24:30.89:0,31,539	0/0:11,0:11:30.08:0,30,332	0/0:18,0:18:42.09:0,42,453	0/0:17,0:17:45.12:0,45,498	0/0:16,0:16:39.09:0,39,424	0/1:26,3:33:0.91:1,0,615	0/0:18,1:19:22.06:0,22,464	0/0:11,1:12:7.05:0,7,306	0/0:15,0:15:19.13:0,19,418	0/0:7,0:8:23.90:0,24,246	0/0:14,0:15:38.90:0,39,398	0/0:21,0:22:47.96:0,48,507	0/0:13,0:15:41.91:0,42,433	0/0:15,0:15:42.03:0,42,438
chr10	7468801	.	A	AT	2249.12	PASS	AB=0.632;AC=21;AF=0.750;AN=28;BaseQRankSum=-3.665;DP=205;FS=12.916;HRun=11;HaplotypeScore=29.6383;InbreedingCoeff=0.7420;MQ=63.43;MQ0=48;MQRankSum=-1.676;QD=18.14;ReadPosRankSum=0.601;VQSLOD=2.9983;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:25:56.76:0,57,441	./.	0/0:21,0:8:11.52:0,12,72	0/0:14,0:6:6.93:0,7,49	./.	1/1:3,9:7:21.01:203,21,0	1/1:3,17:19:47.93:471,48,0	./.	1/1:1,11:9:21.04:212,21,0	./.	./.	./.	./.	./.	./.	./.	1/1:1,9:9:27.05:274,27,0	./.	1/1:5,9:12:29.73:272,30,0	1/1:4,10:12:10.18:265,10,0	1/1:2,3:3:9.02:91,9,0	./.	./.	./.	1/1:1,5:6:15.03:152,15,0	1/1:3,8:10:26.87:250,27,0	0/1:5,7:7:4.49:107,0,4	1/1:0,2:3:8.85:75,9,0
chr10	7469050	.	CT	C	202.74	PASS	AB=0.611;AC=9;AF=0.643;AN=14;BaseQRankSum=0.085;DP=87;FS=2.808;HRun=12;HaplotypeScore=10.2788;MQ=32.95;MQ0=43;MQRankSum=-2.123;QD=4.94;ReadPosRankSum=-0.425;VQSLOD=-0.3888;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	1/1:0,2:2:2.99:23,3,0	./.	0/0:1,0:1:3:0,3,28	./.	./.	./.	1/1:5,11:4:11.95:93,12,0	./.	0/1:4,7:8:9.53:118,0,10	./.	./.	./.	./.	0/0:1,6:3:0:0,0,0	1/1:0,9:6:2.98:23,3,0	./.	./.	./.	./.	./.	./.	./.	./.	./.	1/1:2,1:2:2.99:23,3,0	./.	./.
chr10	7469291	.	GTTTA	G	286.44	PASS	AC=16;AF=0.500;AN=32;BaseQRankSum=-3.678;DP=110;FS=11.419;HRun=0;HaplotypeScore=20.0403;InbreedingCoeff=0.5278;MQ=57.73;MQ0=4;MQRankSum=-0.586;QD=5.03;ReadPosRankSum=2.363;VQSLOD=-0.3366;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:13:18.06:0,18,421	1/1:0,1:1:3.01:47,3,0	./.	./.	1/1:4,0:4:2.97:20,3,0	0/0:1,0:1:3.01:0,3,70	0/0:1,0:1:3.01:0,3,40	1/1:19,0:14:3:26,3,0	1/1:2,0:1:3.01:36,3,0	1/1:6,0:6:3:26,3,0	./.	./.	./.	./.	1/1:6,1:6:3.01:47,3,0	1/1:6,0:6:2.91:21,3,0	0/0:7,0:7:17.99:0,18,369	1/1:6,6:9:12.04:188,12,0	./.	0/0:3,0:3:8.99:0,9,150	./.	./.	./.	./.	0/0:4,0:3:9.03:0,9,193	./.	0/0:1,0:1:3.01:0,3,70	0/0:4,0:4:9.03:0,9,211
chr10	7473961	.	TCC	T	1144.05	PASS	AB=0.936;AC=13;AF=0.232;AN=56;BaseQRankSum=13.945;DP=1258;FS=0.362;HRun=2;HaplotypeScore=183.8920;InbreedingCoeff=-0.3023;MQ=35.60;MQ0=291;MQRankSum=-6.072;QD=2.05;ReadPosRankSum=3.821;VQSLOD=-0.5838;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:24,4:22:99:107,0,864	0/1:22,6:23:99:168,0,1018	0/0:43,0:26:72.24:0,72,1410	0/0:35,0:17:45.11:0,45,792	0/1:65,4:63:38.78:39,0,2714	0/1:31,5:21:99:138,0,854	0/0:23,0:14:33.04:0,33,617	0/0:73,0:36:99:0,108,2190	0/1:70,4:46:99:147,0,1442	0/0:86,0:68:99:0,190,3816	0/0:83,0:75:99:0,181,3561	0/0:36,0:26:66.23:0,66,1330	0/0:45,0:24:63.22:0,63,1248	0/0:34,0:21:48.16:0,48,960	0/0:57,0:45:99:0,117,2276	0/0:62,0:36:99:0,105,2086	0/1:15,7:16:99:286,0,340	0/1:30,2:25:31.47:31,0,1130	0/1:32,0:29:93.95:94,0,942	0/1:51,0:41:51.65:52,0,1224	0/1:20,0:13:55.75:56,0,331	0/0:29,0:22:57.20:0,57,1153	0/0:29,0:23:51.17:0,51,1016	0/0:31,0:21:45.09:0,45,863	0/0:34,0:30:78.06:0,78,1429	0/1:56,0:39:74.90:75,0,1286	0/1:78,0:41:69.43:69,0,1260	0/1:25,0:22:36:36,0,730
chr10	7473963	.	CT	C	2617.68	PASS	AB=0.814;AC=8;AF=0.143;AN=56;BaseQRankSum=8.424;DP=1456;FS=1.282;HRun=2;HaplotypeScore=164.7564;InbreedingCoeff=-0.1668;MQ=33.06;MQ0=498;MQRankSum=-5.285;QD=5.77;ReadPosRankSum=3.933;VQSLOD=0.8662;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:22:58.97:0,59,736	0/0:26,0:23:21.59:0,22,746	0/0:40,0:26:72.24:0,72,1055	0/0:32,1:17:42.12:0,42,597	0/0:69,0:63:99:0,163,2127	0/0:50,0:21:55.70:0,56,714	0/0:22,0:14:30.07:0,30,419	0/0:90,0:36:99:0,108,1592	0/1:74,19:46:99:456,0,991	0/0:86,0:67:99:0,184,2736	0/0:79,0:74:99:0,180,2515	0/0:46,0:26:63.21:0,63,941	0/0:59,0:24:63.18:0,63,911	0/0:44,0:21:45.12:0,45,648	0/0:65,0:44:99:0,114,1628	0/0:79,1:36:99:0,105,1543	0/1:33,0:16:28.08:28,0,288	0/0:37,0:27:71.50:0,72,961	0/1:25,12:29:99:382,0,634	0/1:32,19:41:99:363,0,839	0/1:16,6:13:99:197,0,234	0/0:30,0:22:57.19:0,57,852	0/0:27,0:23:48.12:0,48,692	0/0:38,0:21:42.14:0,42,621	0/0:35,0:30:78.26:0,78,1145	0/1:49,17:39:99:504,0,914	0/1:104,22:41:99:575,0,905	0/1:18,8:22:99:248,0,520
chr10	7475637	.	C	CT	16466.22	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-5.834;DP=497;FS=0.000;HRun=2;HaplotypeScore=54.7864;InbreedingCoeff=0.9751;MQ=54.69;MQ0=3;MQRankSum=-2.879;QD=35.95;ReadPosRankSum=5.162;VQSLOD=4.8409;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,38:40:93.26:1313,93,0	1/1:1,8:9:24.08:344,24,0	0/0:20,0:18:41.31:0,41,541	0/0:19,0:17:22.14:0,22,453	1/1:0,17:17:48.16:690,48,0	1/1:0,17:17:45.15:646,45,0	1/1:1,19:20:45.15:646,45,0	1/1:5,16:17:39.09:534,39,0	1/1:0,17:17:42.14:604,42,0	1/1:0,16:16:48.14:653,48,0	1/1:0,13:13:30.01:385,30,0	1/1:0,9:9:24.05:323,24,0	1/1:0,9:9:18.06:259,18,0	1/1:0,6:6:18.06:259,18,0	1/1:0,13:13:36.12:518,36,0	1/1:1,12:13:36.12:517,36,0	1/1:0,31:31:90.30:1295,90,0	1/1:4,17:20:54.14:740,54,0	1/1:3,15:18:51.14:708,51,0	1/1:0,21:20:57.19:820,57,0	1/1:2,25:25:66.22:950,66,0	1/1:2,9:11:27.09:384,27,0	1/1:0,5:5:15.05:212,15,0	1/1:1,22:23:57.19:820,57,0	1/1:1,22:23:63.17:882,63,0	1/1:1,21:21:60.19:844,60,0	1/1:2,26:28:60.20:861,60,0	1/1:0,7:7:18.06:259,18,0
chr10	7475793	.	G	GTATCTA	5344.28	PASS	AB=0.833;AC=33;AF=0.786;AN=42;BaseQRankSum=-0.860;DP=477;FS=1.231;HRun=0;HaplotypeScore=165.8454;InbreedingCoeff=0.4336;MQ=60.30;MQ0=2;MQRankSum=-0.953;QD=15.63;ReadPosRankSum=2.123;VQSLOD=4.2101;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:31,0:31:3.01:42,3,0	1/1:9,0:9:3.01:45,3,0	0/0:18,0:17:17.93:0,18,141	0/0:21,0:16:8.16:0,8,87	./.	1/1:9,13:21:6.02:160,6,0	0/1:8,2:10:1.75:170,0,2	1/1:43,0:41:49.89:810,50,0	1/1:11,12:23:2.95:55,3,0	1/1:19,0:19:23.59:402,24,0	1/1:23,0:23:3.01:44,3,0	0/0:8,0:8:0.39:0,0,1	./.	0/0:8,0:8:0.47:0,0,1	1/1:14,0:13:3.01:45,3,0	1/1:15,0:15:6.02:93,6,0	1/1:7,2:9:6.02:130,6,0	1/1:6,0:6:6.02:122,6,0	1/1:16,11:25:39.13:1038,39,0	./.	1/1:10,0:9:6.02:89,6,0	./.	./.	./.	./.	1/1:26,0:25:39.66:760,40,0	1/1:36,0:35:55.30:952,55,0	1/1:18,0:18:26.74:388,27,0
chr10	7475812	.	T	TG	304.44	PASS	AB=0.787;AC=7;AF=0.130;AN=54;BaseQRankSum=4.709;DP=513;FS=11.344;HRun=0;HaplotypeScore=155.7171;InbreedingCoeff=-0.0932;MQ=60.51;MQ0=4;MQRankSum=-3.868;QD=2.27;ReadPosRankSum=-2.504;VQSLOD=1.4966;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:15.03:0,15,191	0/0:13,0:13:3.01:0,3,42	0/0:19,0:15:30.06:0,30,379	0/0:31,0:19:26.09:0,26,298	0/0:20,8:27:12.04:0,12,167	0/0:17,5:21:5.91:0,6,58	0/0:16,0:16:26.98:0,27,345	0/0:39,0:37:95.43:0,95,1287	0/0:18,3:20:2.05:0,2,74	0/1:15,5:19:99:182,0,500	0/0:14,6:20:3.01:0,3,47	0/1:6,0:8:19.45:19,0,96	./.	0/1:7,0:8:4.25:4,0,36	0/0:10,5:14:2.89:0,3,42	0/1:13,7:20:39.04:39,0,75	0/0:12,2:14:9.50:0,9,115	0/0:6,0:6:14.74:0,15,209	0/0:22,0:18:53.71:0,54,586	0/0:23,0:22:4.47:0,4,46	0/0:7,2:8:6.02:0,6,84	0/0:4,0:4:3.01:0,3,41	0/1:2,0:7:0:0,0,0	0/0:6,0:6:0:0,0,0	0/0:21,4:25:3.48:0,3,42	0/1:20,3:23:59.23:59,0,713	0/1:38,9:46:99:113,0,801	0/0:16,0:16:29.59:0,30,418
chr10	7475815	.	C	CTA	1488.63	PASS	AB=0.989;AC=24;AF=0.480;AN=50;BaseQRankSum=-1.083;DP=518;FS=12.320;HRun=0;HaplotypeScore=157.5545;InbreedingCoeff=-0.2109;MQ=59.63;MQ0=6;MQRankSum=1.302;QD=3.76;ReadPosRankSum=0.272;VQSLOD=2.3563;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:24:30.39:30,0,115	1/1:14,0:14:3.01:44,3,0	0/0:26,0:16:13.04:0,13,280	0/0:34,0:19:2.29:0,2,214	./.	0/1:24,0:23:1.32:18,0,1	0/1:14,0:14:85.27:85,0,151	0/1:45,0:42:98.90:99,0,569	0/1:20,0:19:1.44:50,0,1	0/1:21,1:21:99:155,0,214	1/1:19,0:19:3.01:39,3,0	0/0:7,0:7:3.65:0,4,11	./.	0/0:8,0:8:1.95:0,2,5	1/1:16,0:15:2.80:45,3,0	0/1:20,0:20:3.24:85,0,3	0/1:13,1:14:2.20:100,0,2	0/1:6,0:6:33.17:33,0,109	0/1:19,0:15:99:292,0,170	1/1:20,0:19:0.97:3,1,0	1/1:8,1:8:6.02:89,6,0	./.	0/0:7,0:7:0:0,0,0	0/0:6,0:6:0.47:0,0,1	0/1:25,0:25:0:0,0,0	0/1:22,1:22:99:101,0,348	0/1:46,0:45:99:245,0,179	0/1:16,0:16:77.25:99,0,77
chr10	7475817	.	ATC	A	1489.52	PASS	AB=0.868;AC=23;AF=0.479;AN=48;BaseQRankSum=-1.166;DP=515;FS=2.807;HRun=0;HaplotypeScore=158.0868;InbreedingCoeff=-0.2317;MQ=59.20;MQ0=6;MQRankSum=2.568;QD=4.22;ReadPosRankSum=-1.925;VQSLOD=2.4923;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:15,10:25:27.40:27,0,182	1/1:11,3:14:3.01:44,3,0	0/0:27,0:15:30.11:0,30,404	0/0:37,0:18:19.04:0,19,343	./.	0/0:24,0:23:4.41:0,4,35	0/1:14,0:14:62.35:62,0,239	0/1:37,5:39:99:155,0,970	0/1:20,0:19:3.53:17,0,4	0/1:17,5:21:99:229,0,606	1/1:11,6:17:3.01:45,3,0	0/0:7,0:7:4.89:0,5,24	./.	0/0:8,0:8:3.17:0,3,17	1/1:9,7:15:3.01:45,3,0	0/1:14,6:20:32.45:67,0,32	0/1:12,2:14:30.67:31,0,38	0/1:4,2:6:33.50:34,0,115	0/1:20,0:15:28.70:29,0,423	0/0:20,0:19:1.73:0,2,5	1/1:7,1:7:6.02:89,6,0	./.	./.	1/1:6,0:6:0.89:2,1,0	0/1:24,0:24:0.05:0,0,0	0/1:19,4:22:99:216,0,739	0/1:31,14:44:99:412,0,641	0/1:14,3:17:99:120,0,182
chr10	7475829	.	TCTATG	T	1515.82	PASS	AB=0.980;AC=27;AF=0.540;AN=50;BaseQRankSum=3.328;DP=517;FS=0.558;HRun=0;HaplotypeScore=172.5681;InbreedingCoeff=0.0893;MQ=55.60;MQ0=10;MQRankSum=-3.276;QD=4.21;ReadPosRankSum=-2.883;VQSLOD=1.9482;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:14.95:0,15,498	./.	0/0:38,0:14:23.53:0,24,458	0/0:37,0:15:27.55:0,28,505	0/1:26,0:25:0.04:0,0,0	0/1:21,0:20:35.08:35,0,105	0/0:12,0:12:15.05:0,15,476	0/1:60,0:52:99:520,0,2514	1/1:18,0:17:2.12:5,2,0	0/1:18,0:17:99:181,0,527	1/1:12,6:18:3:27,3,0	1/1:3,2:5:5.91:97,6,0	./.	0/0:6,1:7:2.74:0,3,12	1/1:17,0:16:6.01:56,6,0	1/1:16,0:16:5.76:77,6,0	0/1:15,2:17:6.88:7,0,81	0/1:5,0:5:28.90:29,0,255	0/0:16,0:12:12.66:0,13,947	1/1:19,0:18:8.47:70,8,0	./.	1/1:3,0:3:2.60:10,3,0	0/1:7,0:7:0:0,0,0	1/1:5,0:5:1.25:3,1,0	0/1:24,0:24:0.21:0,0,0	0/1:20,3:22:99:241,0,973	0/1:44,0:43:99:250,0,769	0/1:14,0:14:52.86:53,0,575
chr10	7475831	.	TATG	T	1791.64	PASS	AB=0.826;AC=25;AF=0.500;AN=50;BaseQRankSum=3.164;DP=524;FS=0.564;HRun=0;HaplotypeScore=165.9417;InbreedingCoeff=-0.0052;MQ=56.44;MQ0=10;MQRankSum=-3.472;QD=5.40;ReadPosRankSum=-2.099;VQSLOD=2.7160;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:14.95:0,15,346	./.	0/0:40,1:16:20.25:0,20,320	0/0:38,0:16:23.08:0,23,340	0/1:23,3:25:0.09:0,0,0	0/1:12,9:21:52.70:53,0,59	0/1:11,2:13:33.02:33,0,307	0/1:50,11:53:99:465,0,1472	0/0:16,2:17:2.26:0,2,14	0/1:11,7:17:99:328,0,358	1/1:17,1:18:3.01:43,3,0	1/1:5,0:5:6.02:83,6,0	./.	0/0:8,0:8:2.62:0,3,12	1/1:12,5:16:5.98:47,6,0	1/1:9,7:16:5.45:100,5,0	0/1:11,5:16:44.22:44,0,52	0/1:5,0:5:23.58:24,0,177	0/0:16,1:13:10.74:0,11,628	1/1:15,4:18:9.50:153,9,0	./.	1/1:2,1:3:3.01:51,3,0	0/1:2,5:7:0:0,0,0	1/1:6,0:6:0.89:2,1,0	0/0:19,4:23:0.34:0,0,0	0/1:22,1:22:99:174,0,660	0/1:34,10:43:99:298,0,480	0/1:13,1:14:36.29:36,0,330
chr10	7475834	.	G	GATCTATCTATCT	6334.51	PASS	AB=0.800;AC=40;AF=0.769;AN=52;BaseQRankSum=0.528;DP=538;FS=16.546;HRun=0;HaplotypeScore=196.7289;InbreedingCoeff=0.5076;MQ=61.48;MQ0=10;MQRankSum=-3.087;QD=15.41;ReadPosRankSum=1.200;VQSLOD=2.8745;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:20.78:0,21,628	0/1:6,10:18:0:0,0,0	0/0:42,0:18:5.89:0,6,63	0/0:39,0:19:3.03:0,3,81	1/1:27,0:26:3.48:46,3,0	1/1:19,0:18:8.95:146,9,0	1/1:12,0:12:12.04:197,12,0	1/1:67,0:59:82.11:1553,82,0	1/1:17,0:16:5.92:79,6,0	1/1:19,0:18:41.99:786,42,0	1/1:17,0:17:3.01:69,3,0	1/1:5,0:5:6.02:182,6,0	./.	0/1:8,0:8:0:0,0,0	1/1:18,0:17:9.02:165,9,0	1/1:17,0:17:8.68:206,9,0	1/1:15,0:15:6.02:101,6,0	1/1:5,0:5:11.07:246,11,0	1/1:20,0:15:8.06:130,8,0	1/1:19,0:18:8.68:191,9,0	./.	1/1:3,0:3:3.01:51,3,0	0/0:7,0:7:0:0,0,0	0/0:6,0:6:0:0,0,0	1/1:24,0:24:2.56:47,3,0	1/1:24,0:23:35.70:1017,36,0	1/1:43,0:42:32.63:736,33,0	1/1:14,0:14:18.81:385,19,0
chr10	7475869	.	C	CTA	1202.35	PASS	AB=0.882;AC=10;AF=0.179;AN=56;BaseQRankSum=5.662;DP=519;FS=11.600;HRun=0;HaplotypeScore=139.2531;InbreedingCoeff=-0.2576;MQ=67.66;MQ0=4;MQRankSum=-7.319;QD=5.32;ReadPosRankSum=-4.167;VQSLOD=1.3881;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:36.07:0,36,544	0/0:16,0:16:2.96:0,3,46	0/1:28,0:18:28.85:29,0,212	0/0:34,0:20:19.11:0,19,231	0/0:27,3:29:20.43:0,20,281	0/1:20,3:22:13.35:13,0,251	0/1:13,1:14:99:120,0,205	0/1:46,1:42:99:362,0,633	0/0:18,3:20:2.69:0,3,298	0/1:21,0:22:99:140,0,546	0/0:16,2:18:14.79:0,15,194	0/0:6,0:6:11.47:0,11,106	0/0:3,0:3:9.02:0,9,116	0/0:11,1:12:16.53:0,17,232	0/0:15,0:14:9.02:0,9,93	0/0:13,2:17:13.89:0,14,147	0/1:14,1:15:17.19:17,0,170	0/1:3,3:6:61.61:105,0,62	0/0:11,1:10:22.29:0,22,344	0/0:16,5:20:24.17:0,24,299	0/0:10,0:11:15.05:0,15,227	0/0:6,0:6:13.60:0,14,186	0/0:8,0:8:6.02:0,6,89	0/0:7,1:8:7.27:0,7,94	0/0:18,9:27:22.90:0,23,326	0/1:24,2:26:99:219,0,568	0/1:25,5:30:99:118,0,298	0/1:8,5:13:99:219,0,112
chr10	7476029	.	T	TG	20396.09	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-8.175;DP=633;FS=7.338;HRun=4;HaplotypeScore=61.2474;InbreedingCoeff=0.9892;MQ=64.42;MQ0=1;MQRankSum=-4.145;QD=34.69;ReadPosRankSum=6.462;VQSLOD=4.6695;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,32:39:87.28:1175,87,0	1/1:0,13:13:39.09:512,39,0	0/0:25,0:25:69.15:0,69,762	0/0:20,0:20:54.14:0,54,599	1/1:2,27:29:69.10:892,69,0	1/1:3,23:25:69.17:920,69,0	1/1:3,18:21:45.15:615,45,0	1/1:4,31:33:84.23:1072,84,0	1/1:2,13:15:39.13:533,39,0	1/1:3,31:34:93.30:1256,93,0	1/1:1,19:20:54.18:737,54,0	1/1:2,7:9:15.05:205,15,0	1/1:1,18:19:48.16:655,48,0	1/1:1,25:26:66.22:900,66,0	1/1:0,12:12:30.10:410,30,0	1/1:0,20:20:51.17:697,51,0	1/1:0,23:23:66.22:899,66,0	1/1:1,19:20:54.18:739,54,0	1/1:3,24:26:75.23:1003,75,0	1/1:0,34:34:99:1354,99,0	1/1:2,24:26:63.21:862,63,0	1/1:0,10:10:30.10:410,30,0	1/1:2,14:16:39.13:529,39,0	1/1:1,20:21:60.20:819,60,0	1/1:0,25:25:69.23:943,69,0	1/1:0,28:27:78.25:1050,78,0	1/1:2,29:31:69.06:922,69,0	1/1:0,9:9:21.07:287,21,0
chr10	7477537	.	C	CTGCTTACTGGCTTTCTCAGCT	20285.34	PASS	AB=0.694;AC=21;AF=0.375;AN=56;BaseQRankSum=-2.964;DP=658;FS=1.388;HRun=0;HaplotypeScore=342.8713;InbreedingCoeff=0.9131;MQ=60.37;MQ0=4;MQRankSum=-11.781;QD=72.45;ReadPosRankSum=-4.570;VQSLOD=3.2007;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:72.23:0,72,3539	0/0:11,0:11:24.08:0,24,1315	0/0:26,0:22:27.08:0,27,697	0/0:17,0:16:15.05:0,15,607	0/0:31,0:31:51.18:0,51,2490	1/1:23,0:24:24.01:1184,24,0	1/1:22,0:22:27.08:1676,27,0	0/0:33,0:33:60.21:0,60,2452	1/1:11,11:22:33.04:2265,33,0	0/0:20,0:20:36.11:0,36,1658	0/0:21,0:21:33.10:0,33,1507	0/0:27,0:27:39.13:0,39,1840	0/0:21,0:20:43.37:0,43,1864	0/0:25,0:25:48.16:0,48,2327	0/0:23,0:23:51.14:0,51,2220	0/0:11,0:11:24.07:0,24,1107	1/1:20,3:22:36.12:2804,36,0	0/0:12,0:12:21.05:0,21,850	1/1:31,0:31:23.32:1624,23,0	1/1:17,16:37:24.04:1669,24,0	1/1:16,0:16:18.50:698,19,0	0/0:24,0:24:57.17:0,57,2824	0/0:30,0:30:51.15:0,51,2179	0/0:12,0:12:27.09:0,27,1314	1/1:29,0:29:27.09:1215,27,0	0/1:14,9:25:34.71:2285,0,35	1/1:22,16:40:45.15:3876,45,0	1/1:5,4:10:12.04:988,12,0
chr10	7478244	.	TACAA	T	13283.28	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=2.705;DP=590;FS=4.277;HRun=0;HaplotypeScore=139.9607;InbreedingCoeff=0.8952;MQ=67.58;MQ0=2;MQRankSum=-0.805;QD=24.37;ReadPosRankSum=4.031;VQSLOD=4.6547;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,13:20:42.14:678,42,0	1/1:4,0:16:21.02:196,21,0	0/0:22,0:18:12.04:0,12,250	0/0:23,0:20:25.15:0,25,437	1/1:3,0:21:15.02:140,15,0	1/1:8,23:31:63.21:1018,63,0	1/1:4,12:16:9.03:144,9,0	1/1:11,0:23:26.61:214,27,0	1/1:6,22:28:63.21:1017,63,0	1/1:9,0:29:60.05:552,60,0	1/1:4,0:18:15.02:140,15,0	1/1:4,14:18:36.12:582,36,0	1/1:9,16:25:39.13:630,39,0	1/1:5,13:18:36.12:582,36,0	1/1:2,0:19:24.03:224,24,0	1/1:10,0:21:15.02:140,15,0	1/1:4,14:18:39.13:630,39,0	1/1:2,0:6:9.01:84,9,0	1/1:8,10:18:30.09:442,30,0	1/1:9,18:27:39.13:629,39,0	1/1:6,8:14:21.07:339,21,0	1/1:9,16:24:48.16:776,48,0	1/1:5,15:20:39.13:630,39,0	1/1:6,10:16:21.07:339,21,0	1/1:4,20:24:54.18:873,54,0	1/1:6,24:30:72.23:1125,72,0	1/1:7,22:29:51.17:824,51,0	1/1:5,10:15:21.07:339,21,0
chr10	7478318	.	AAC	A	698.48	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=1.537;DP=639;FS=0.000;HRun=0;HaplotypeScore=118.4096;InbreedingCoeff=0.9973;MQ=70.77;MQ0=2;MQRankSum=-1.705;QD=29.10;ReadPosRankSum=1.543;VQSLOD=4.8159;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,21:24:57.15:793,57,0	0/0:12,0:12:36.12:0,36,647	0/0:17,0:14:42.14:0,42,743	0/0:21,0:18:54.14:0,54,921	0/0:19,0:19:54.19:0,54,966	0/0:23,0:23:63.22:0,63,1155	0/0:20,0:20:51.17:0,51,884	0/0:41,0:41:99:0,111,2000	0/0:30,0:30:87.30:0,87,1570	0/0:38,0:38:99:0,108,1883	0/0:23,0:23:60.21:0,60,1078	0/0:20,0:20:48.16:0,48,880	0/0:22,0:22:60.19:0,60,1063	0/0:19,0:19:57.18:0,57,1000	0/0:21,0:21:48.16:0,48,879	0/0:17,0:17:48.14:0,48,831	0/0:21,0:21:63.20:0,63,1103	0/0:16,0:16:45.15:0,45,790	0/0:20,0:20:57.17:0,57,937	0/0:30,0:30:84.29:0,84,1533	0/0:20,0:20:60.19:0,60,1068	0/0:24,0:23:69.24:0,69,1249	0/0:29,0:29:87.30:0,87,1587	0/0:13,0:13:30:0,30,540	0/0:31,0:31:84.29:0,84,1517	0/0:33,0:33:96.29:0,96,1724	0/0:24,0:24:72.25:0,72,1318	0/0:11,0:11:24.08:0,24,440
chr10	7479880	.	CTT	C	1937.33	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=-0.448;DP=603;FS=7.640;HRun=14;HaplotypeScore=86.5711;InbreedingCoeff=0.8928;MQ=75.31;MQ0=4;MQRankSum=0.062;QD=12.42;ReadPosRankSum=3.916;VQSLOD=2.5594;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:32:38.96:0,39,348	0/0:11,0:12:24.07:0,24,321	0/0:31,0:21:16.83:0,17,184	0/1:28,0:16:15.16:15,0,65	0/0:34,0:41:60.36:0,60,913	0/0:3,0:20:39.01:0,39,356	0/0:2,0:16:30:0,30,286	0/0:21,0:21:42.13:0,42,575	0/0:9,0:18:27.02:0,27,264	0/0:13,0:13:36.09:0,36,445	0/0:15,0:16:30.05:0,30,351	1/1:5,9:15:22.39:204,22,0	1/1:0,15:15:26.99:250,27,0	1/1:1,13:16:26.62:281,27,0	0/0:17,0:19:42.96:0,43,476	0/0:12,0:12:30.02:0,30,332	0/0:8,0:24:26.83:0,27,262	0/0:12,0:15:38.09:0,38,459	0/0:13,0:23:44.90:0,45,399	0/0:10,0:28:68.90:0,69,674	0/0:16,0:23:48.52:0,49,465	1/1:4,23:28:44.79:463,45,0	1/1:7,20:28:47.56:475,48,0	1/1:6,19:26:50.44:440,50,0	0/0:11,0:25:44.43:0,44,392	0/0:8,0:24:61.85:0,62,559	0/0:6,0:21:29.59:0,30,284	0/0:3,0:10:11.99:0,12,104
chr10	7480515	.	AG	A	5865.68	PASS	AB=0.982;AC=53;AF=0.946;AN=56;BaseQRankSum=-3.463;DP=570;FS=3.308;HRun=5;HaplotypeScore=74.0907;InbreedingCoeff=0.1223;MQ=65.24;MQ0=82;MQRankSum=0.204;QD=10.29;ReadPosRankSum=2.600;VQSLOD=2.0829;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:20:41.79:317,42,0	1/1:9,0:7:14.97:122,15,0	0/1:71,2:12:55.15:62,0,55	0/1:72,2:18:35.80:36,0,97	1/1:4,9:13:21.04:126,21,0	1/1:14,0:14:19.05:267,19,0	1/1:19,0:14:8.91:65,9,0	1/1:6,13:17:27.38:217,27,0	1/1:16,0:13:35.83:282,36,0	1/1:10,24:29:60.15:475,60,0	1/1:2,11:12:15.15:89,15,0	1/1:6,0:6:14.92:116,15,0	1/1:9,0:8:20.92:167,21,0	1/1:12,0:8:14.04:118,14,0	1/1:16,0:14:26.94:220,27,0	1/1:8,0:7:14.99:128,15,0	1/1:27,0:24:56.56:417,57,0	1/1:14,0:11:32.87:259,33,0	1/1:12,0:12:2.18:138,2,0	1/1:6,22:25:50.06:308,50,0	1/1:11,0:10:26.93:218,27,0	1/1:22,0:18:32.39:204,32,0	1/1:23,0:22:50.69:394,51,0	1/1:12,0:12:32.86:259,33,0	1/1:13,0:10:20.84:156,21,0	1/1:5,16:18:41.81:318,42,0	1/1:19,0:18:50.66:389,51,0	0/1:10,0:2:0:0,0,0
chr10	7480519	.	GGTTTTTTTTTTTTTTTTTTTTTTT	G	5130.19	PASS	AB=1.000;AC=38;AF=0.704;AN=54;BaseQRankSum=0.204;DP=585;FS=0.000;HRun=0;HaplotypeScore=242.8842;InbreedingCoeff=-0.1130;MQ=58.84;MQ0=104;MQRankSum=4.232;QD=9.63;ReadPosRankSum=1.018;VQSLOD=3.3336;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:20:31.48:0,31,978	0/1:8,0:6:8.34:8,0,145	0/1:70,0:9:59.13:59,0,244	0/1:73,0:17:26.53:27,0,816	0/1:15,0:13:28.15:28,0,145	0/1:13,0:13:99:247,0,124	1/1:9,0:14:5.62:357,6,0	0/1:20,0:16:81.76:82,0,286	1/1:17,0:14:30.13:273,30,0	0/1:36,0:30:99:138,0,355	0/1:16,0:15:37.68:38,0,71	1/1:8,0:8:0.62:79,1,0	1/1:9,0:8:14.82:157,15,0	0/1:12,0:7:25.02:98,0,25	0/1:17,0:15:63.93:64,0,232	0/1:9,0:8:38.35:88,0,38	1/1:25,0:21:51.32:563,51,0	0/0:18,0:13:4.03:0,4,228	0/1:10,0:9:3.76:133,0,4	1/1:26,0:23:50.07:307,50,0	1/1:10,0:9:26.93:218,27,0	1/1:8,17:20:28.31:491,28,0	1/1:21,1:21:27.74:325,28,0	1/1:15,0:13:29.06:200,29,0	1/1:12,0:9:7.82:293,8,0	1/1:22,0:18:38.98:314,39,0	1/1:18,0:17:50.69:543,51,0	./.
chr10	7481066	.	A	ACAC	15987.60	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-14.464;DP=609;FS=0.994;HRun=0;HaplotypeScore=78.1990;InbreedingCoeff=0.9994;MQ=80.05;MQ0=0;MQRankSum=-6.008;QD=53.65;ReadPosRankSum=2.255;VQSLOD=7.1985;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,33:32:81.28:1768,81,0	0/0:8,0:8:21.07:0,21,333	0/0:17,0:17:48.11:0,48,682	0/0:16,0:16:36.54:0,37,520	0/0:22,0:22:57.19:0,57,904	1/1:2,30:33:90.31:1962,90,0	1/1:2,22:27:60.21:1309,60,0	0/0:28,0:28:69.22:0,69,1043	1/1:7,20:27:69.21:1412,69,0	0/0:22,0:22:57.19:0,57,894	0/0:19,0:19:48.16:0,48,759	0/0:22,0:22:66.21:0,66,1024	0/0:30,0:30:81.28:0,81,1274	0/0:13,0:13:39.13:0,39,618	0/0:21,0:21:60.20:0,60,951	0/0:17,0:17:45.15:0,45,714	1/1:3,22:26:69.18:1400,69,0	0/0:14,0:14:42.14:0,42,666	1/1:5,14:19:48.16:1006,48,0	1/1:2,22:25:72.23:1516,72,0	1/1:2,20:23:66.23:1426,66,0	0/0:20,0:20:54.18:0,54,856	0/0:15,0:15:42.14:0,42,666	0/0:27,0:26:78.24:0,78,1206	1/1:6,19:27:57.01:1110,57,0	1/1:5,14:19:54.17:1094,54,0	1/1:7,15:21:57.20:1242,57,0	1/1:3,14:14:36.10:743,36,0
chr10	7481144	.	G	GA	10900.73	PASS	AB=0.958;AC=38;AF=0.679;AN=56;BaseQRankSum=4.917;DP=626;FS=4.602;HRun=9;HaplotypeScore=91.2337;InbreedingCoeff=0.8813;MQ=78.16;MQ0=0;MQRankSum=-1.357;QD=24.66;ReadPosRankSum=1.681;VQSLOD=5.3569;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,28:31:87.23:960,87,0	0/0:14,0:14:38.99:0,39,338	0/1:20,0:20:0.93:1,0,188	0/0:18,0:17:21.46:0,21,153	0/0:23,0:23:62.97:0,63,547	1/1:7,23:30:69.19:763,69,0	1/1:2,15:18:21.91:453,22,0	0/0:27,0:27:56.94:0,57,494	1/1:5,20:26:69.02:744,69,0	0/0:37,0:37:92.96:0,93,807	0/0:21,0:21:59.99:0,60,521	1/1:2,18:20:51.14:564,51,0	1/1:4,18:22:28.09:538,28,0	1/1:0,13:13:39.11:431,39,0	0/0:16,0:16:44.99:0,45,391	0/1:10,1:11:9.21:9,0,155	1/1:5,19:24:60.14:654,60,0	0/0:28,0:28:64.03:0,64,569	1/1:7,12:20:25.04:479,25,0	1/1:9,16:25:37.28:613,37,0	1/1:4,17:23:62.81:647,63,0	1/1:3,13:16:33.09:365,33,0	1/1:2,26:29:74.56:795,75,0	1/1:2,24:26:72.19:796,72,0	1/1:7,15:22:45.12:498,45,0	1/1:6,22:29:63.15:687,63,0	1/1:3,24:27:63.17:697,63,0	1/1:6,4:10:21.01:205,21,0
chr10	7481751	.	AT	A	731.62	PASS	AB=0.900;AC=17;AF=0.425;AN=40;BaseQRankSum=3.328;DP=141;FS=7.106;HRun=1;HaplotypeScore=68.6696;InbreedingCoeff=0.5361;MQ=48.12;MQ0=2;MQRankSum=-3.979;QD=7.32;ReadPosRankSum=5.036;VQSLOD=0.8811;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:3,0:3:6.02:0,6,72	./.	./.	0/1:8,0:2:0:0,0,0	0/0:1,0:1:3.01:0,3,38	1/1:10,2:12:8.98:100,9,0	1/1:5,0:5:8.90:60,9,0	0/0:8,0:7:18.06:0,18,227	1/1:8,3:11:26.47:172,26,0	0/0:2,0:2:6.02:0,6,76	0/0:1,0:1:3:0,3,26	./.	./.	./.	./.	0/0:2,0:2:6.02:0,6,75	0/1:8,1:9:3.29:34,0,3	0/0:7,0:7:21.07:0,21,273	0/0:11,0:11:31.59:0,32,169	1/1:13,8:21:20.37:226,20,0	0/1:2,0:2:0:0,0,0	./.	./.	0/0:2,0:2:6.02:0,6,76	1/1:5,1:6:14.74:94,15,0	0/1:8,2:10:8.55:9,0,55	0/1:9,4:13:0.20:130,0,0	1/1:0,3:3:8.71:49,9,0
chr10	7481753	.	ATATATATATATATATATATATATATATATATATATAT	A	6563.97	PASS	AB=0.891;AC=15;AF=0.395;AN=38;BaseQRankSum=6.517;DP=131;FS=4.832;HRun=0;HaplotypeScore=171.0330;InbreedingCoeff=0.3615;MQ=47.09;MQ0=2;MQRankSum=-2.324;QD=73.75;ReadPosRankSum=3.610;VQSLOD=3.7718;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:3,0:3:6.02:0,6,164	./.	./.	0/0:8,0:2:0.47:0,0,1	0/0:1,0:1:3.01:0,3,44	0/1:10,2:12:5.14:525,0,5	0/1:5,0:5:0:0,0,0	0/0:7,0:6:18.06:0,18,1317	1/1:7,3:10:9.03:800,9,0	0/0:1,0:1:3.01:0,3,96	./.	./.	0/0:2,0:2:3.01:0,3,356	./.	./.	./.	1/1:7,1:8:8.12:291,8,0	0/0:6,0:6:18.06:0,18,2327	0/0:11,0:11:18.17:0,18,161	1/1:12,8:20:35.68:2271,36,0	0/1:2,0:2:0:0,0,0	./.	./.	0/0:1,0:1:3.01:0,3,66	1/1:5,1:6:3.01:266,3,0	0/1:8,2:10:47.51:557,0,48	0/1:9,4:13:13.85:1052,0,14	1/1:0,3:3:9.03:803,9,0
chr10	7482112	.	T	TA	20258.07	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-8.746;DP=555;FS=0.585;HRun=3;HaplotypeScore=46.4300;InbreedingCoeff=0.9762;MQ=85.82;MQ0=0;MQRankSum=-10.946;QD=39.80;ReadPosRankSum=6.519;VQSLOD=3.5568;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,23:25:60.20:899,60,0	1/1:0,4:4:12.04:173,12,0	0/0:25,0:25:68.25:0,68,858	0/0:21,0:21:63.03:0,63,764	1/1:0,33:33:93.23:1344,93,0	1/1:1,22:23:57.19:854,57,0	1/1:0,15:15:42.14:629,42,0	1/1:3,21:24:66.19:933,66,0	1/1:1,22:23:63.21:944,63,0	1/1:0,23:22:69.23:1028,69,0	1/1:0,19:19:54.18:809,54,0	1/1:0,20:20:60.20:899,60,0	1/1:2,21:23:60.20:899,60,0	1/1:0,14:14:33.11:495,33,0	1/1:0,19:19:54.18:809,54,0	1/1:0,14:14:36.12:540,36,0	1/1:0,15:15:39.13:585,39,0	1/1:2,18:20:45.11:650,45,0	1/1:2,29:31:87.29:1299,87,0	1/1:2,24:26:72.24:1078,72,0	1/1:1,23:24:57.19:854,57,0	1/1:1,17:18:45.15:674,45,0	1/1:0,14:14:39.12:585,39,0	1/1:0,15:15:42.14:630,42,0	1/1:1,19:20:45.15:674,45,0	1/1:1,21:22:63.21:942,63,0	1/1:1,17:18:54.18:807,54,0	1/1:1,5:6:15.05:224,15,0
chr10	7486406	.	C	CT	1312.82	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.164;DP=626;FS=0.000;HRun=0;HaplotypeScore=71.2994;InbreedingCoeff=0.9616;MQ=67.49;MQ0=1;MQRankSum=-0.369;QD=30.53;ReadPosRankSum=0.412;VQSLOD=3.2810;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,40:42:90.31:1408,90,0	0/0:5,0:5:15.05:0,15,209	0/0:34,0:26:70.55:0,71,831	0/0:25,1:19:41.92:0,42,526	0/0:19,0:19:57.16:0,57,748	0/0:16,0:16:45.15:0,45,627	0/0:30,0:30:90.28:0,90,1240	0/0:31,0:31:90.28:0,90,1215	0/0:23,0:23:69.21:0,69,932	0/0:20,0:20:57.15:0,57,761	0/0:14,0:14:42.13:0,42,572	0/0:21,0:21:63.18:0,63,861	0/0:20,0:20:60.20:0,60,839	0/0:29,0:29:87.25:0,87,1193	0/0:18,0:18:54.18:0,54,755	0/0:13,0:13:36.12:0,36,503	0/0:39,0:39:99:0,114,1509	0/0:30,1:31:90.30:0,90,1256	0/0:19,0:18:54.16:0,54,721	0/0:13,0:13:36.12:0,36,503	0/0:37,0:37:99:0,111,1528	0/0:7,0:7:21.07:0,21,293	0/0:6,0:6:15.05:0,15,210	0/0:36,0:36:99:0,105,1407	0/0:21,0:21:60.17:0,60,804	0/0:24,0:24:72.21:0,72,960	0/0:24,0:24:72.16:0,72,981	0/0:7,0:7:21.07:0,21,293
chr10	7486817	.	TA	T	2730.09	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=11.271;DP=618;FS=5.563;HRun=1;HaplotypeScore=57.4165;InbreedingCoeff=0.9938;MQ=76.66;MQ0=0;MQRankSum=0.503;QD=32.50;ReadPosRankSum=0.886;VQSLOD=3.0858;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,99,1363	0/0:10,0:10:30.10:0,30,427	0/0:17,0:15:29.11:0,29,464	0/0:15,0:14:13.99:0,14,408	0/0:24,0:24:71.95:0,72,938	0/0:27,0:27:81.27:0,81,1156	0/0:18,0:18:54.14:0,54,718	0/0:25,0:25:72.21:0,72,965	0/0:18,0:18:54.10:0,54,710	0/0:37,0:37:99:0,108,1456	0/0:19,0:19:57.16:0,57,777	0/0:25,0:25:74.80:0,75,999	0/0:25,0:25:75.24:0,75,1054	0/0:25,0:25:75.21:0,75,1017	0/0:21,0:21:63.17:0,63,846	0/0:17,0:17:51.11:0,51,687	0/0:22,0:22:66.17:0,66,900	0/0:16,0:16:48.07:0,48,619	0/0:20,0:20:58.38:0,58,718	0/0:35,0:35:99:0,105,1444	1/1:0,18:18:48.16:669,48,0	0/0:19,0:19:57.18:0,57,796	0/0:17,0:17:51.10:0,51,686	0/0:18,0:18:48.72:0,49,703	0/0:28,0:28:84.22:0,84,1125	1/1:1,24:25:75.09:899,75,0	1/1:0,28:28:69.23:947,69,0	1/1:0,13:13:27.09:375,27,0
chr10	7487503	.	ATG	A	12333.42	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=14.397;DP=727;FS=0.675;HRun=0;HaplotypeScore=142.8837;InbreedingCoeff=0.9997;MQ=59.25;MQ0=2;MQRankSum=-0.721;QD=27.11;ReadPosRankSum=6.314;VQSLOD=5.8881;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,39:49:99:1259,99,0	0/0:15,0:15:36.11:0,36,460	0/0:46,0:27:48.11:0,48,720	0/0:32,0:22:35.41:0,35,681	0/0:23,0:23:65.88:0,66,833	1/1:2,19:21:48.15:611,48,0	1/1:2,23:25:54.17:687,54,0	0/0:35,0:35:72.18:0,72,888	1/1:3,21:24:51.16:649,51,0	0/0:25,0:25:60.18:0,60,744	0/0:20,0:20:45.14:0,45,573	1/1:1,14:15:36.12:458,36,0	1/1:1,21:22:47.76:610,48,0	1/1:5,34:39:96.31:1222,96,0	0/0:28,0:28:72.19:0,72,901	0/0:28,0:28:78.21:0,78,974	1/1:3,20:23:54.14:670,54,0	0/0:20,0:20:53.73:0,54,654	1/1:8,17:24:42.13:532,42,0	1/1:4,24:28:69.22:878,69,0	1/1:7,34:41:84.27:1068,84,0	1/1:1,17:18:45.14:573,45,0	1/1:1,12:13:29.97:381,30,0	1/1:8,27:35:60.19:763,60,0	1/1:6,18:24:42.13:534,42,0	1/1:5,15:20:48.15:599,48,0	1/1:5,15:20:36.11:458,36,0	1/1:3,10:13:29.86:381,30,0
chr10	7488084	.	CA	C	5355.23	PASS	AB=0.977;AC=23;AF=0.411;AN=56;BaseQRankSum=7.147;DP=578;FS=3.074;HRun=8;HaplotypeScore=75.9973;InbreedingCoeff=0.9578;MQ=79.70;MQ0=1;MQRankSum=-1.512;QD=19.54;ReadPosRankSum=3.988;VQSLOD=5.0619;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:56.96:0,57,500	0/0:8,0:8:21.06:0,21,254	0/1:41,0:36:0.67:1,0,548	0/0:33,0:22:26.79:0,27,233	0/0:23,0:23:63.17:0,63,733	1/1:0,20:20:57.09:550,57,0	1/1:4,13:17:30.05:290,30,0	0/0:33,0:33:52.84:0,53,675	1/1:3,17:20:39.06:377,39,0	0/0:26,0:26:63.18:0,63,744	0/0:18,0:18:48.14:0,48,571	0/0:12,0:13:30.06:0,30,336	0/0:15,0:15:42.13:0,42,507	0/0:7,0:7:18.05:0,18,207	0/0:19,0:19:57.17:0,57,689	0/0:19,0:19:48.15:0,48,580	1/1:3,29:32:75.11:724,75,0	0/0:12,0:12:33.10:0,33,399	1/1:2,19:21:57.09:550,57,0	1/1:1,23:24:66.10:634,66,0	1/1:2,12:14:30.04:290,30,0	0/0:13,0:14:41.99:0,42,483	0/0:20,0:20:51.13:0,51,593	0/0:17,0:17:45.14:0,45,544	1/1:2,18:20:42.07:406,42,0	1/1:6,26:32:78.12:753,78,0	1/1:1,16:17:42.07:406,42,0	1/1:1,14:15:39.06:376,39,0
chr10	7488272	.	AAG	A	2483.37	PASS	AB=0.780;AC=17;AF=0.304;AN=56;BaseQRankSum=1.725;DP=533;FS=0.990;HRun=0;HaplotypeScore=102.3772;InbreedingCoeff=0.5435;MQ=72.47;MQ0=25;MQRankSum=3.552;QD=13.80;ReadPosRankSum=-2.508;VQSLOD=3.2405;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:18:3.53:11,4,0	0/1:6,3:8:14.09:40,0,14	0/0:39,0:24:50.46:0,50,612	0/0:53,1:28:28.35:0,28,423	0/1:7,15:22:10.26:220,0,10	0/0:19,0:19:48.16:0,48,723	0/0:19,0:19:51.17:0,51,789	1/1:6,20:26:60.16:711,60,0	0/0:16,0:15:1.36:0,1,442	1/1:6,14:20:42.80:483,43,0	1/1:2,13:15:17.79:119,18,0	0/1:7,0:7:0.05:0,0,0	0/0:11,0:11:0.29:0,0,1	0/1:12,0:12:0.09:0,0,0	1/1:23,0:23:27.98:568,28,0	0/1:2,8:10:14.01:30,0,14	0/0:25,0:22:57.60:0,58,869	1/1:16,0:16:42:469,42,0	0/0:18,0:17:35.70:0,36,432	0/0:23,1:22:42.14:0,42,656	0/0:28,0:27:65.17:0,65,872	0/0:14,0:14:1.41:0,1,2	0/0:15,0:15:0:0,0,0	0/0:19,0:15:1.29:0,1,3	0/0:16,0:15:29.93:0,30,422	0/0:15,0:15:1.04:0,1,523	0/0:12,0:11:32.87:0,33,445	0/0:9,0:7:15.05:0,15,222
chr10	7489563	.	G	GGT	3101.38	PASS	AB=0.811;AC=44;AF=0.815;AN=54;BaseQRankSum=-1.725;DP=640;FS=2.115;HRun=0;HaplotypeScore=104.2932;InbreedingCoeff=-0.1468;MQ=56.29;MQ0=21;MQRankSum=0.204;QD=5.06;ReadPosRankSum=-1.016;VQSLOD=2.9422;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:31,15:47:99:140,0,106	1/1:2,0:10:8.56:64,9,0	./.	0/1:36,0:14:0:0,0,0	1/1:6,0:14:2.04:6,2,0	1/1:19,3:23:16.15:199,16,0	1/1:17,4:31:11.04:181,11,0	1/1:25,0:24:5.96:45,6,0	1/1:10,1:22:3.01:45,3,0	1/1:12,0:25:15.33:87,15,0	0/1:18,0:19:0:0,0,0	1/1:20,1:20:8.88:114,9,0	0/1:9,2:12:36.05:36,0,57	0/1:13,9:23:42.02:242,0,42	1/1:8,0:9:3.89:28,4,0	1/1:13,0:22:8.73:64,9,0	1/1:19,3:25:23.59:244,24,0	1/1:12,0:18:3:26,3,0	1/1:7,5:14:18.18:198,18,0	1/1:9,0:16:6.90:69,7,0	0/1:40,2:39:22.85:276,0,23	0/1:9,7:15:20.04:79,0,20	1/1:8,14:21:14.94:225,15,0	1/1:17,19:34:30.10:451,30,0	0/1:9,1:27:36.85:180,0,37	0/1:17,1:18:75.39:75,0,76	0/1:12,7:18:80.74:117,0,81	1/1:14,2:15:3.01:45,3,0
chr10	7490227	.	T	TTCC	19278.11	PASS	AB=0.563;AC=23;AF=0.411;AN=56;BaseQRankSum=14.493;DP=729;FS=1.991;HRun=0;HaplotypeScore=118.9085;InbreedingCoeff=0.9248;MQ=76.80;MQ0=0;MQRankSum=-6.285;QD=54.30;ReadPosRankSum=3.094;VQSLOD=7.0600;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,51:59:99:2626,123,0	0/0:9,0:9:24.03:0,24,368	0/0:25,0:25:50.32:0,50,824	0/0:20,0:20:41.28:0,41,701	0/0:18,0:18:42.08:0,42,628	1/1:1,26:27:69.24:1479,69,0	1/1:2,22:24:63.22:1370,63,0	0/0:34,0:34:84.27:0,84,1355	1/1:2,26:29:78.22:1696,78,0	0/0:17,0:17:48.15:0,48,756	0/0:8,0:8:21.07:0,21,349	0/0:24,0:24:69.24:0,69,1146	0/0:33,0:33:99:0,99,1584	0/0:40,0:40:99:0,117,1908	0/0:45,0:45:99:0,129,2090	0/0:28,0:27:84.27:0,84,1368	1/1:4,39:43:99:2432,108,0	0/0:8,0:8:24.05:0,24,372	1/1:8,20:29:75.20:1569,75,0	1/1:0,22:23:63.22:1385,63,0	1/1:2,38:41:99:2184,99,0	0/0:16,0:16:48.16:0,48,798	0/0:14,0:14:42.14:0,42,693	0/0:35,0:35:96.29:0,96,1568	1/1:0,19:19:51.18:1155,51,0	0/1:4,14:18:48.73:873,0,49	1/1:0,30:30:87.30:1966,87,0	1/1:0,13:13:24.08:543,24,0
chr10	7490729	.	GCTCTTCAGTGT	G	11118.92	PASS	AB=0.747;AC=18;AF=0.321;AN=56;BaseQRankSum=15.442;DP=658;FS=18.319;HRun=0;HaplotypeScore=221.6099;InbreedingCoeff=0.8262;MQ=87.21;MQ0=0;MQRankSum=-14.725;QD=54.50;ReadPosRankSum=-0.527;VQSLOD=2.6592;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,27:34:45.15:1556,45,0	1/1:1,11:12:30.10:1058,30,0	0/0:26,0:26:69.24:0,69,3626	0/0:25,0:25:60.18:0,60,2602	1/1:3,18:21:26.91:896,27,0	0/0:28,0:28:84.29:0,84,4571	0/0:29,0:29:84.27:0,84,4207	1/1:3,18:21:54.15:1621,54,0	0/0:30,0:30:90.31:0,90,5056	1/1:5,16:21:45.15:1499,45,0	1/1:3,16:19:42.14:1471,42,0	0/0:29,0:29:78.27:0,78,4228	0/0:24,0:24:72.25:0,72,3923	0/0:28,0:28:81.28:0,81,4504	1/1:3,24:27:36.12:1270,36,0	0/1:3,18:21:99:1385,0,127	0/0:28,0:28:81.28:0,81,4405	1/1:2,5:7:9.03:318,9,0	0/0:14,0:14:42.14:0,42,1942	0/0:30,0:30:87.24:0,87,4539	0/0:41,0:41:99:0,123,6601	0/0:23,0:23:66.23:0,66,3422	0/0:14,0:14:33.11:0,33,1814	0/0:36,0:36:99:0,102,5642	0/0:18,0:18:48.12:0,48,2573	0/1:20,1:21:45.65:46,0,3131	0/0:21,0:21:63.22:0,63,3443	0/0:10,0:10:30.10:0,30,1719
chr10	7492657	.	T	TTCC	5495.30	PASS	AB=0.952;AC=37;AF=0.661;AN=56;BaseQRankSum=0.547;DP=631;FS=37.859;HRun=0;HaplotypeScore=153.8114;InbreedingCoeff=0.5363;MQ=40.34;MQ0=35;MQRankSum=-2.562;QD=13.21;ReadPosRankSum=1.986;VQSLOD=2.9759;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:20:1.49:238,1,0	1/1:8,1:9:4.33:110,4,0	0/0:30,0:13:0.42:0,0,26	0/0:29,0:20:29.47:0,29,314	1/1:9,2:11:21.03:355,21,0	1/1:18,1:13:24.08:482,24,0	0/1:22,2:14:36.01:259,0,36	1/1:17,0:8:2.03:19,2,0	1/1:22,0:18:11.79:144,12,0	1/1:23,2:15:12.48:196,12,0	1/1:12,4:13:21.27:337,21,0	0/0:33,0:28:26.63:0,27,476	0/0:24,0:20:21.02:0,21,276	0/0:22,0:16:21.07:0,21,309	1/1:16,1:14:20.97:311,21,0	1/1:19,3:20:26.16:460,26,0	1/1:23,1:20:5.72:280,6,0	0/1:17,1:14:76.44:130,0,76	1/1:16,0:8:1.46:74,1,0	1/1:10,1:11:18.06:339,18,0	0/1:52,1:41:67.84:265,0,68	0/0:20,0:16:26.31:0,26,375	0/0:21,0:20:37.37:0,37,515	0/0:35,0:32:42.04:0,42,564	1/1:18,2:19:27.01:423,27,0	1/1:27,3:22:1.70:507,2,0	1/1:18,0:17:3.54:258,4,0	1/1:9,1:10:14.17:307,14,0
chr10	7492669	.	CTCT	C	2129.77	PASS	AB=0.928;AC=28;AF=0.500;AN=56;BaseQRankSum=2.842;DP=577;FS=50.568;HRun=0;HaplotypeScore=166.6778;InbreedingCoeff=-0.0103;MQ=38.87;MQ0=32;MQRankSum=-2.542;QD=5.45;ReadPosRankSum=0.645;VQSLOD=1.2798;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:22,4:15:13.72:133,0,14	0/1:9,0:9:8.55:36,0,9	0/0:28,0:8:20.99:0,21,192	0/0:32,0:18:33.99:0,34,436	0/1:13,0:13:14.30:153,0,14	1/1:9,6:11:5.70:153,6,0	0/1:17,3:11:87.99:93,0,88	0/1:12,0:6:2.69:3,0,67	1/1:13,2:12:11.99:124,12,0	1/1:23,0:13:18.74:140,19,0	1/1:16,0:13:2.93:180,3,0	0/1:29,0:24:30.89:31,0,812	0/0:26,0:21:23.78:0,24,416	0/0:21,0:15:25.26:0,25,501	1/1:17,0:14:19.50:175,19,0	0/1:21,0:18:53.11:202,0,53	0/1:17,2:16:26.78:76,0,27	0/1:20,0:15:36.73:37,0,41	0/1:12,1:6:18.40:51,0,18	1/1:5,4:9:16.24:135,16,0	0/1:38,2:30:62.34:75,0,62	0/0:27,0:24:49.67:0,50,752	0/0:22,0:21:51.02:0,51,919	0/0:28,0:25:42.14:0,42,876	1/1:10,5:14:0.78:118,1,0	0/1:26,3:21:48.92:199,0,49	0/1:18,1:17:77.98:78,0,175	0/1:4,4:8:1.25:118,0,1
chr10	7492675	.	CTTG	C	2301.40	PASS	AB=0.921;AC=31;AF=0.554;AN=56;BaseQRankSum=6.208;DP=505;FS=3.020;HRun=0;HaplotypeScore=157.5236;InbreedingCoeff=0.3653;MQ=38.72;MQ0=21;MQRankSum=-1.921;QD=7.62;ReadPosRankSum=2.105;VQSLOD=3.1128;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:18,2:11:7.22:143,7,0	0/0:6,0:6:1.09:0,1,39	0/0:30,0:7:21.06:0,21,384	0/0:36,0:16:30.12:0,30,517	0/1:10,0:10:86.74:142,0,87	1/1:12,1:10:3.23:109,3,0	1/1:16,1:9:5.79:135,6,0	0/0:9,0:6:17.41:0,17,190	1/1:6,1:7:9.03:104,9,0	0/1:16,1:9:6.65:13,0,7	0/1:13,0:12:17.47:149,0,17	0/1:30,2:26:67.92:68,0,730	0/0:23,1:19:21.94:0,22,367	0/0:16,3:15:30.10:0,30,611	1/1:9,3:9:10.57:110,11,0	0/1:15,1:14:25.12:277,0,25	1/1:18,2:15:8.88:232,9,0	0/1:14,4:14:5.65:94,0,6	1/1:5,2:4:6.46:75,6,0	1/1:6,0:6:14.48:113,14,0	1/1:24,6:23:0.50:119,1,0	0/0:28,0:26:59.20:0,59,1251	0/0:20,0:19:48.07:0,48,983	0/0:28,1:24:38.92:0,39,856	1/1:11,0:11:9.74:82,10,0	1/1:20,3:18:36.67:312,37,0	0/1:12,1:12:35.51:112,0,36	1/1:7,0:7:15.38:101,15,0
chr10	7492676	.	TTGTC	T	1204.78	PASS	AB=0.829;AC=25;AF=0.446;AN=56;BaseQRankSum=5.775;DP=482;FS=1.676;HRun=0;HaplotypeScore=162.7245;InbreedingCoeff=0.1701;MQ=39.30;MQ0=18;MQRankSum=-1.559;QD=4.43;ReadPosRankSum=1.474;VQSLOD=2.0839;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:16,4:11:30.72:55,0,31	0/0:4,0:4:11.96:0,12,160	0/0:29,0:7:20.96:0,21,461	0/0:36,0:16:31.57:0,32,625	0/1:7,0:10:58.36:58,0,134	1/1:6,6:10:15.56:125,16,0	1/1:14,3:8:11.05:72,11,0	0/0:8,0:6:18.06:0,18,272	1/1:5,2:7:8.09:41,8,0	0/0:14,0:9:8.37:0,8,152	0/1:12,0:12:20.56:65,0,21	0/1:31,1:26:14.27:14,0,915	0/0:20,3:19:18.49:0,18,395	0/0:19,0:15:30.10:0,30,734	0/1:9,0:9:11.09:17,0,11	0/1:9,0:13:87.36:131,0,87	1/1:14,3:14:9.29:129,9,0	0/1:13,3:14:33.52:119,0,34	0/1:3,2:4:11.52:48,0,12	1/1:2,4:6:14.55:88,15,0	0/1:23,3:21:5.14:71,0,5	0/0:26,0:25:60.21:0,60,1571	0/0:19,1:19:48.07:0,48,1120	0/0:29,0:24:38.49:0,38,996	1/1:7,5:11:5.34:75,5,0	0/1:15,3:18:28.42:104,0,28	0/1:11,1:11:86.35:86,0,128	1/1:3,4:7:10.45:94,10,0
chr10	7492681	.	CTTG	C	2036.74	PASS	AB=0.955;AC=29;AF=0.518;AN=56;BaseQRankSum=4.828;DP=493;FS=2.415;HRun=0;HaplotypeScore=153.4301;InbreedingCoeff=0.2154;MQ=38.37;MQ0=23;MQRankSum=-3.559;QD=6.79;ReadPosRankSum=-0.560;VQSLOD=2.8793;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:17,1:10:12.91:147,13,0	0/0:4,0:4:4.34:0,4,61	0/0:33,0:8:20.96:0,21,331	0/0:40,0:15:22.46:0,22,343	0/1:9,2:11:39.52:72,0,40	1/1:14,0:10:4.36:151,4,0	1/1:15,1:8:17.87:140,18,0	0/1:10,0:8:14.56:16,0,15	1/1:5,2:7:9.03:109,9,0	0/1:18,0:10:8.08:8,0,67	1/1:11,1:11:16:120,16,0	0/1:30,3:28:60.67:61,0,467	0/0:19,2:17:4.99:0,5,191	0/0:16,2:15:23.28:0,23,320	1/1:7,3:8:8.30:65,8,0	0/1:12,3:13:11.52:219,0,12	0/1:20,0:15:7.96:148,0,8	0/1:18,0:13:3.25:61,0,3	1/1:5,1:4:1.72:54,2,0	1/1:6,0:6:12:118,12,0	0/1:24,2:18:1.49:99,0,1	0/0:25,0:23:59.87:0,60,901	0/0:21,0:20:40.75:0,41,554	0/0:28,1:23:3.32:0,3,535	0/1:12,0:12:1.45:99,0,1	1/1:23,1:17:15.64:274,16,0	0/1:13,0:12:29.47:128,0,29	0/1:7,0:7:0.30:123,0,0
chr10	7492682	.	TTGTCC	T	1460.83	PASS	AB=0.825;AC=23;AF=0.411;AN=56;BaseQRankSum=5.276;DP=462;FS=9.605;HRun=0;HaplotypeScore=155.8658;InbreedingCoeff=0.1081;MQ=38.82;MQ0=23;MQRankSum=-2.537;QD=6.89;ReadPosRankSum=1.168;VQSLOD=2.2938;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:11,4:9:34.49:80,0,34	0/0:4,0:4:8.18:0,8,137	0/0:33,0:8:20.78:0,21,389	0/0:41,0:15:23.60:0,24,429	0/1:10,0:10:53.09:53,0,116	1/1:7,6:10:7.19:230,7,0	1/1:9,3:5:11.52:110,12,0	0/0:10,0:8:24.08:0,24,347	0/1:4,2:7:3.48:58,0,3	0/0:18,0:10:2.35:0,2,150	1/1:12,0:11:5.41:73,5,0	0/0:31,0:27:25.51:0,26,808	0/0:19,0:17:20.79:0,21,284	0/0:16,0:14:27.09:0,27,537	1/1:10,0:8:9.76:59,10,0	0/1:15,0:13:99:101,0,102	1/1:13,1:11:3.56:124,4,0	0/1:11,0:11:25.28:25,0,25	0/1:5,1:4:20:36,0,20	1/1:1,4:5:12.03:136,12,0	0/1:21,3:16:29.68:71,0,30	0/0:25,0:23:59.44:0,59,1325	0/0:21,0:20:42.62:0,43,792	0/0:27,0:21:34.34:0,34,615	0/1:5,4:10:16.40:153,0,16	0/1:16,3:12:47.69:125,0,48	0/1:11,1:11:57.80:58,0,216	0/1:2,4:6:21.43:148,0,21
chr10	7492771	.	CTCT	C	2331.01	PASS	AB=0.919;AC=14;AF=0.269;AN=52;BaseQRankSum=5.875;DP=1483;FS=3.527;HRun=0;HaplotypeScore=195.0650;InbreedingCoeff=-0.0221;MQ=19.07;MQ0=305;MQRankSum=-1.626;QD=3.50;ReadPosRankSum=0.640;VQSLOD=2.3747;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:97,0:54:35:0,35,1005	1/1:9,7:10:21.05:356,21,0	./.	./.	0/1:31,13:35:34.32:516,0,34	0/0:35,0:16:15.01:0,15,235	0/1:100,2:30:25.91:26,0,268	1/1:38,0:3:2.97:20,3,0	0/1:52,0:20:22.95:23,0,133	0/1:54,13:41:99:613,0,317	0/1:25,9:25:95.63:324,0,96	0/0:84,0:47:25.25:0,25,659	0/0:33,0:23:15.04:0,15,256	0/1:64,1:29:90.81:95,0,91	0/1:49,6:26:99:234,0,152	0/1:81,5:57:99:266,0,753	0/0:78,1:51:20.51:0,21,1041	0/0:50,0:24:18.06:0,18,407	0/0:42,0:9:14.84:0,15,335	0/0:17,0:11:11.47:0,11,174	0/0:131,2:66:7.10:0,7,691	0/0:37,1:25:18.63:0,19,339	0/0:35,0:22:11.16:0,11,176	0/1:77,1:42:0.02:0,0,179	0/1:28,0:18:9.87:10,0,170	0/0:110,0:37:28.47:0,28,820	0/0:37,0:20:29.84:0,30,428	0/0:25,0:9:11.99:0,12,178
chr10	7492797	.	CT	C	142.26	PASS	AB=0.830;AC=4;AF=0.077;AN=52;BaseQRankSum=6.645;DP=1409;FS=0.744;HRun=2;HaplotypeScore=182.1163;InbreedingCoeff=-0.1056;MQ=19.09;MQ0=312;MQRankSum=-1.263;QD=1.01;ReadPosRankSum=2.277;VQSLOD=-0.5186;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:93,0:52:65.36:0,65,890	0/1:9,5:10:31.74:79,0,32	./.	./.	0/1:31,7:28:38.77:39,0,174	0/0:38,0:14:8.34:0,8,125	0/0:90,0:29:20.74:0,21,280	0/0:56,0:4:3.01:0,3,45	0/0:44,0:19:17.88:0,18,207	0/1:51,8:32:99:100,0,398	0/1:25,5:23:31.17:31,0,161	0/0:79,0:42:57.09:0,57,762	0/0:41,0:20:15.92:0,16,204	0/0:56,0:27:33.90:0,34,381	0/0:54,2:26:7.76:0,8,240	0/0:87,3:57:12.93:0,13,733	0/0:76,0:51:56.13:0,56,742	0/0:42,0:19:18.84:0,19,200	0/0:39,0:9:18.06:0,18,268	0/0:11,0:9:10.98:0,11,111	0/0:132,0:71:58.36:0,58,851	0/0:44,0:28:16.11:0,16,372	0/0:35,0:22:33.02:0,33,398	0/0:66,0:35:14.84:0,15,177	0/0:27,0:14:11.94:0,12,116	0/0:102,0:45:75.21:0,75,1086	0/0:36,0:21:36.10:0,36,498	0/0:14,0:5:12.04:0,12,180
chr10	7492800	.	CCT	C	279.78	PASS	AB=0.874;AC=6;AF=0.115;AN=52;BaseQRankSum=5.985;DP=1391;FS=0.759;HRun=0;HaplotypeScore=186.2305;InbreedingCoeff=-0.1329;MQ=19.08;MQ0=308;MQRankSum=-1.047;QD=1.00;ReadPosRankSum=1.172;VQSLOD=2.4221;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:91,0:52:75.24:0,75,1277	0/1:9,5:10:61.28:114,0,61	./.	./.	0/1:31,7:28:63.16:63,0,218	0/0:38,0:14:12.03:0,12,198	0/0:97,0:31:21.07:0,21,382	0/0:56,0:4:3.01:0,3,58	0/0:41,0:17:15.50:0,15,212	0/1:49,8:32:99:162,0,500	0/1:25,5:23:45.46:45,0,231	0/0:81,0:43:57.20:0,57,1081	0/0:42,0:20:17.85:0,18,307	0/0:58,0:28:16.10:0,16,533	0/1:53,2:26:1.01:1,0,266	0/1:82,3:54:5.41:5,0,928	0/0:74,0:49:54.43:0,54,913	0/0:39,0:17:14:0,14,187	0/0:39,0:9:21.07:0,21,377	0/0:9,0:7:9.87:0,10,103	0/0:124,0:67:64.52:0,65,1189	0/0:46,0:28:19.11:0,19,588	0/0:37,0:24:38.93:0,39,655	0/0:61,0:32:17.76:0,18,286	0/0:27,0:14:11.07:0,11,162	0/0:103,0:45:78.22:0,78,1387	0/0:35,0:20:36.11:0,36,634	0/0:14,0:5:12.04:0,12,231
chr10	7492858	.	CTCT	C	497.51	PASS	AB=0.981;AC=20;AF=0.370;AN=54;BaseQRankSum=3.128;DP=1198;FS=0.556;HRun=0;HaplotypeScore=193.4653;InbreedingCoeff=-0.3529;MQ=18.54;MQ0=277;MQRankSum=-0.825;QD=0.55;ReadPosRankSum=-1.790;VQSLOD=2.6161;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:68,0:41:81.02:81,0,231	0/0:15,0:11:19.56:0,20,188	0/0:10,0:1:2.68:0,3,11	./.	0/0:28,0:17:16.32:0,16,176	0/1:33,3:16:99:102,0,116	0/1:69,0:18:0.27:0,0,197	0/1:74,0:4:8.04:8,0,80	0/0:33,0:18:3.54:0,4,138	0/0:62,0:27:5.63:0,6,408	0/1:19,0:18:27.93:28,0,118	0/1:56,1:29:20.78:21,0,251	0/1:49,0:17:35.38:35,0,55	0/0:42,2:18:17.89:0,18,138	0/1:30,0:19:30.43:30,0,158	0/1:61,1:38:36.45:36,0,235	0/1:52,1:34:47.75:48,0,225	1/1:30,0:17:7.28:68,7,0	0/1:58,0:14:5.42:5,0,191	0/1:16,0:8:26.42:26,0,44	0/1:104,4:55:16.10:16,0,226	0/1:38,3:24:33.65:34,0,55	0/0:36,2:30:7.27:0,7,330	0/1:60,1:31:53.82:54,0,80	0/0:25,0:12:11.41:0,11,79	0/1:57,1:26:30.23:30,0,233	0/0:24,0:14:2.34:0,2,180	1/1:14,0:6:2.99:24,3,0
chr10	7492888	.	CTCA	C	733.77	PASS	AB=0.953;AC=18;AF=0.321;AN=56;BaseQRankSum=5.054;DP=981;FS=20.135;HRun=0;HaplotypeScore=205.9689;InbreedingCoeff=-0.3546;MQ=19.47;MQ0=171;MQRankSum=1.104;QD=1.11;ReadPosRankSum=-3.770;VQSLOD=0.7699;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:68,2:45:14.91:0,15,510	0/1:9,0:9:43.34:43,0,87	1/1:36,0:1:2.68:11,3,0	0/0:37,0:2:6.02:0,6,97	0/1:20,0:17:4.68:125,0,5	0/0:27,2:13:1.43:0,1,232	0/0:47,0:11:20.45:0,20,156	0/0:27,0:7:11.03:0,11,94	0/0:26,2:18:2.09:0,2,144	0/1:41,2:22:74.32:74,0,198	0/1:19,0:13:54.84:55,0,65	0/1:43,2:33:51.98:52,0,228	0/1:31,2:16:3.38:3,0,129	0/1:31,5:22:99:112,0,123	0/1:27,2:21:79.78:80,0,160	0/1:30,1:18:56.96:73,0,57	0/1:48,1:26:11.51:12,0,88	0/1:28,0:16:18.02:18,0,250	0/0:27,0:7:12.02:0,12,150	0/0:14,0:7:11.94:0,12,112	0/1:85,0:46:66.57:67,0,226	0/1:32,2:21:1.21:1,0,199	0/1:29,1:25:18.63:19,0,236	0/1:63,1:38:80.80:81,0,225	0/0:16,0:6:8.82:0,9,78	0/1:56,5:28:58.07:58,0,278	0/0:13,2:11:17.92:0,18,226	0/0:10,0:6:6.02:0,6,83
chr10	7492897	.	C	CTCT	41.85	PASS	AB=0.994;AC=7;AF=0.125;AN=56;BaseQRankSum=3.349;DP=1038;FS=5.701;HRun=0;HaplotypeScore=220.6187;InbreedingCoeff=-0.0252;MQ=19.27;MQ0=184;MQRankSum=-1.138;QD=0.16;ReadPosRankSum=-4.577;VQSLOD=0.7217;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:73,0:46:27.04:0,27,669	0/0:13,0:9:20.58:0,21,187	1/1:34,0:1:1.25:3,1,0	0/0:34,0:2:6.02:0,6,81	0/1:25,0:19:43.48:43,0,94	0/0:32,0:15:20.28:0,20,295	0/0:58,0:14:20.40:0,20,225	0/0:33,0:6:2.90:0,3,16	0/0:27,1:18:24.56:0,25,279	0/0:42,0:22:24.41:0,24,357	0/0:20,0:12:5.86:0,6,165	0/1:46,0:34:9.14:9,0,403	0/0:35,0:15:6.02:0,6,251	0/1:40,0:23:6.71:7,0,128	0/0:32,0:20:13.04:0,13,226	0/1:33,1:19:61.91:62,0,88	0/0:50,0:25:0.86:0,1,173	0/0:32,0:16:20.61:0,21,272	0/0:22,0:6:12.04:0,12,190	0/0:17,0:9:17.94:0,18,199	0/1:85,0:46:28.84:29,0,307	0/0:31,0:18:14.91:0,15,233	0/0:31,0:25:38.67:0,39,469	0/0:64,2:34:32.15:0,32,321	0/0:24,0:8:11.94:0,12,127	0/0:72,0:36:30.98:0,31,677	0/0:18,0:13:20.99:0,21,307	0/0:10,0:8:6.02:0,6,95
chr10	7492918	.	CTCT	C	829.20	PASS	AB=0.991;AC=19;AF=0.352;AN=54;BaseQRankSum=4.397;DP=1187;FS=18.669;HRun=0;HaplotypeScore=230.4845;InbreedingCoeff=-0.3870;MQ=18.89;MQ0=222;MQRankSum=0.009;QD=0.97;ReadPosRankSum=-2.525;VQSLOD=0.9438;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:74,4:48:99:236,0,152	0/1:14,0:8:14.49:14,0,72	./.	0/0:19,0:1:3.01:0,3,59	0/1:23,0:15:6.63:7,0,110	0/0:42,0:17:14.54:0,15,142	1/1:75,0:17:8.30:49,8,0	0/0:55,0:3:3.73:0,4,103	0/0:35,1:19:17.09:0,17,134	0/1:55,0:26:25.54:26,0,168	0/1:17,0:7:12.52:20,0,13	0/0:49,1:34:27.32:0,27,466	0/1:42,0:21:0.87:1,0,259	0/1:60,0:38:49.72:50,0,201	0/0:39,0:23:22.38:0,22,218	0/1:34,0:14:22.82:23,0,35	0/1:62,0:33:59.86:94,0,60	0/1:31,0:13:17.16:31,0,17	0/1:39,0:9:0.87:1,0,106	0/0:17,0:8:0.80:0,1,21	0/1:92,3:50:65.57:66,0,123	0/0:42,0:28:28.66:0,29,416	0/1:32,0:25:76.24:76,0,134	0/1:63,0:34:77.84:78,0,138	0/1:25,0:13:12.45:12,0,83	0/1:85,3:51:99:169,0,691	0/0:19,0:13:12.90:0,13,237	0/1:15,0:10:26.67:27,0,39
chr10	7492927	.	C	CTCT	2087.40	PASS	AB=0.993;AC=24;AF=0.444;AN=54;BaseQRankSum=4.458;DP=1291;FS=9.215;HRun=0;HaplotypeScore=240.5435;InbreedingCoeff=-0.6491;MQ=18.61;MQ0=252;MQRankSum=0.202;QD=1.84;ReadPosRankSum=0.003;VQSLOD=0.9661;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:79,1:50:99:158,0,129	0/1:16,0:7:18.22:18,0,47	./.	0/0:8,0:1:2.97:0,3,20	0/1:26,0:17:32:32,0,57	0/1:44,0:19:57.92:58,0,67	1/1:78,0:20:19.11:195,19,0	0/0:79,0:7:4.10:0,4,49	0/1:42,1:21:15:192,0,15	0/1:58,0:26:23.16:23,0,149	0/1:17,0:7:15.72:47,0,16	0/1:57,0:37:99:113,0,295	0/1:45,0:20:99:139,0,144	0/1:69,0:41:99:116,0,153	0/0:44,0:24:32.03:0,32,234	0/1:36,2:15:14.75:15,0,31	0/1:58,3:30:40.64:191,0,41	0/1:32,0:12:3.06:3,0,36	0/1:51,0:11:38.69:39,0,57	0/0:19,0:10:3.55:0,4,34	0/1:93,2:49:30.23:138,0,30	0/1:47,0:31:99:142,0,184	0/1:36,0:27:77.25:233,0,77	0/1:68,0:32:72.15:151,0,72	0/1:32,0:16:82.71:94,0,83	0/1:100,0:55:99:114,0,611	0/1:19,0:12:25.35:25,0,64	0/1:14,0:9:0.37:0,0,60
chr10	7492930	.	C	CTCT	1307.88	PASS	AB=0.991;AC=17;AF=0.315;AN=54;BaseQRankSum=2.724;DP=1297;FS=2.794;HRun=0;HaplotypeScore=242.7741;InbreedingCoeff=-0.3905;MQ=18.59;MQ0=252;MQRankSum=-0.734;QD=1.37;ReadPosRankSum=-1.833;VQSLOD=2.5324;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:80,0:50:99:167,0,216	0/0:15,0:6:4.38:0,4,42	./.	0/0:9,0:1:2.97:0,3,20	0/1:24,0:16:14.42:14,0,70	0/1:40,0:17:45.46:102,0,45	0/1:83,0:22:38.06:42,0,38	0/1:81,0:7:13.04:13,0,53	0/1:44,0:22:55.14:93,0,55	0/0:58,0:25:8.19:0,8,159	0/0:19,0:8:6.98:0,7,51	0/0:59,0:37:14.49:0,14,387	0/0:46,0:20:15.87:0,16,229	0/1:70,0:41:46.71:47,0,334	0/1:43,0:24:24.61:25,0,107	1/1:37,0:15:6.17:85,6,0	0/1:55,4:30:36.45:227,0,36	0/0:30,0:11:8.68:0,9,54	0/1:54,0:13:38.55:39,0,49	0/0:20,0:11:6.20:0,6,36	0/1:96,2:50:99:208,0,115	0/0:44,0:28:3.60:0,4,204	0/1:35,0:26:82.03:82,0,136	0/1:65,0:30:24.05:24,0,143	0/1:32,0:16:72.15:82,0,72	0/1:102,0:54:99:209,0,537	0/0:20,0:14:12.19:0,12,140	0/0:13,0:8:5.98:0,6,57
chr10	7492939	.	TTCC	T	943.85	PASS	AB=0.995;AC=20;AF=0.370;AN=54;BaseQRankSum=4.059;DP=1309;FS=6.921;HRun=0;HaplotypeScore=246.6671;InbreedingCoeff=-0.3919;MQ=18.73;MQ0=257;MQRankSum=0.927;QD=0.98;ReadPosRankSum=-2.007;VQSLOD=1.1520;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:82,0:47:10.09:10,0,170	0/1:15,0:6:20.54:21,0,34	0/0:12,0:1:3.01:0,3,41	./.	0/1:30,0:23:60.10:60,0,86	1/1:39,0:16:11.71:90,12,0	0/1:84,0:26:48.22:50,0,48	0/0:80,0:9:5.98:0,6,61	0/1:46,0:23:34.18:38,0,34	0/1:61,1:23:91.92:100,0,92	0/1:22,0:12:6.27:6,0,24	0/0:53,0:33:22.23:0,22,313	0/0:49,0:22:2.36:0,2,209	0/1:67,1:40:38.01:38,0,253	0/0:46,0:27:14.90:0,15,377	0/0:34,1:15:3.73:0,4,91	0/1:53,1:28:41.42:88,0,41	0/0:31,0:11:7.63:0,8,33	0/1:64,0:14:41.70:42,0,63	0/1:25,0:17:78.32:116,0,78	0/1:98,0:49:4.96:5,0,189	0/1:46,0:30:6.46:6,0,415	0/1:33,0:24:99:162,0,104	0/1:58,1:28:58.14:107,0,58	1/1:32,0:17:0.17:117,0,0	0/1:99,2:52:34.47:34,0,572	0/0:18,0:12:5.94:0,6,47	0/0:11,0:7:3:0,3,27
chr10	7492951	.	CTCT	C	2660.35	PASS	AB=0.966;AC=27;AF=0.482;AN=56;BaseQRankSum=3.532;DP=1219;FS=42.005;HRun=0;HaplotypeScore=243.1002;InbreedingCoeff=-0.5626;MQ=22.25;MQ0=204;MQRankSum=-1.492;QD=2.39;ReadPosRankSum=0.559;VQSLOD=1.4750;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:74,0:46:99:110,0,140	1/1:18,1:12:3.51:116,4,0	0/0:24,0:2:3.01:0,3,30	0/0:26,0:4:9:0,9,81	0/1:27,3:23:51.26:150,0,51	1/1:29,5:14:20.86:223,21,0	0/1:69,7:23:60.44:156,0,60	0/1:65,0:9:15.31:42,0,15	0/1:42,4:24:7.40:178,0,7	0/1:56,2:24:81.62:196,0,82	0/1:16,1:10:35.52:60,0,36	0/0:50,0:31:4.18:0,4,257	0/1:45,0:22:17.85:18,0,238	0/1:67,0:41:99:157,0,281	0/1:45,1:29:58.71:59,0,214	0/1:34,1:16:32.57:60,0,33	0/1:45,0:25:86.12:108,0,86	0/1:26,1:11:19.11:19,0,36	0/1:46,3:14:5.48:109,0,5	0/1:14,5:17:77.41:250,0,77	0/1:83,1:45:23.93:24,0,132	0/1:46,0:32:17.14:17,0,540	0/1:36,0:28:99:117,0,145	0/1:52,0:26:44.24:72,0,44	1/1:22,9:19:23.51:363,24,0	0/1:91,1:50:99:197,0,409	0/1:16,0:11:13.62:14,0,41	0/0:7,0:4:2.37:0,2,8
chr10	7492954	.	TTCC	T	2645.15	PASS	AB=0.987;AC=32;AF=0.571;AN=56;BaseQRankSum=3.805;DP=1172;FS=49.759;HRun=0;HaplotypeScore=243.5681;InbreedingCoeff=-0.4293;MQ=23.71;MQ0=187;MQRankSum=0.096;QD=2.39;ReadPosRankSum=-2.528;VQSLOD=1.0723;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:74,0:45:81.03:81,0,170	1/1:18,0:12:1.61:78,2,0	0/0:25,0:4:3:0,3,38	0/0:30,0:5:9.03:0,9,155	0/1:30,0:24:17.32:101,0,17	1/1:31,1:13:19.79:154,20,0	0/1:71,0:22:45.54:46,0,69	1/1:59,0:7:0.28:1,0,0	1/1:41,0:23:6.74:154,7,0	0/1:54,0:23:99:113,0,130	0/1:14,0:10:44.41:44,0,52	0/1:47,1:30:51.42:51,0,136	0/1:40,2:22:99:106,0,170	0/1:61,3:39:99:431,0,223	0/1:48,0:31:34.29:34,0,86	1/1:34,0:15:11.54:109,12,0	0/1:44,0:25:43.21:43,0,119	0/1:26,0:11:29.28:32,0,29	1/1:44,0:13:22.80:200,23,0	0/1:20,0:18:40.32:139,0,40	0/1:79,1:44:46.61:47,0,132	0/1:46,2:33:99:147,0,405	0/1:33,2:28:99:220,0,173	1/1:48,1:25:5.82:145,6,0	0/1:29,0:20:5.46:128,0,5	0/1:87,1:47:99:143,0,420	0/1:16,0:11:53.72:54,0,64	0/0:6,0:3:3:0,3,27
chr10	7492972	.	CTCA	C	1440.89	PASS	AB=0.982;AC=24;AF=0.429;AN=56;BaseQRankSum=2.834;DP=838;FS=20.969;HRun=0;HaplotypeScore=226.1510;InbreedingCoeff=-0.5839;MQ=32.31;MQ0=88;MQRankSum=-3.044;QD=2.08;ReadPosRankSum=0.842;VQSLOD=1.2710;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:49,0:37:37.77:38,0,195	0/1:14,0:10:47.91:48,0,148	0/0:49,0:11:25.50:0,25,292	0/0:42,0:7:5.09:0,5,256	0/1:24,0:22:18.15:18,0,73	0/1:19,0:12:25.30:25,0,105	0/1:39,0:16:36.33:36,0,198	0/0:26,0:8:12.02:0,12,221	0/1:32,0:21:88.24:88,0,99	0/1:29,2:23:33.02:33,0,281	0/1:19,1:17:41.42:48,0,41	0/1:33,0:20:77.87:78,0,78	0/1:25,0:16:45.92:98,0,46	0/1:38,0:29:99:307,0,146	0/1:26,2:22:6.17:6,0,113	1/1:26,0:16:13.29:113,13,0	0/1:28,1:21:2.63:64,0,3	0/1:14,1:9:10.39:10,0,29	0/1:25,0:12:94.81:127,0,95	0/0:20,0:19:2.31:0,2,266	0/1:52,0:31:9.07:9,0,107	0/1:33,0:26:82.34:82,0,301	0/1:28,0:25:99:107,0,277	0/1:31,0:15:9.09:51,0,9	0/1:28,0:25:14.01:14,0,339	0/1:59,0:37:99:127,0,658	0/1:12,1:11:38.02:68,0,38	0/0:6,0:4:11.65:0,12,117
chr10	7492974	.	CAT	C	999.21	PASS	AB=0.875;AC=19;AF=0.339;AN=56;BaseQRankSum=2.068;DP=775;FS=53.146;HRun=0;HaplotypeScore=217.9905;InbreedingCoeff=-0.3769;MQ=34.91;MQ0=74;MQRankSum=0.571;QD=1.97;ReadPosRankSum=2.927;VQSLOD=0.7969;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:39,3:34:57.08:57,0,292	0/1:11,3:11:65.05:65,0,172	0/0:52,0:11:30.08:0,30,449	0/0:44,0:8:12.88:0,13,284	0/1:17,4:20:3.06:3,0,173	0/0:16,1:11:0.94:0,1,164	0/0:33,0:14:21.01:0,21,311	0/0:21,0:10:12.04:0,12,240	0/1:24,4:19:66.32:66,0,98	0/1:26,2:24:59.60:60,0,270	0/1:19,0:17:5.26:5,0,94	0/1:29,1:18:52.04:52,0,149	0/1:22,3:18:67.44:92,0,67	0/1:25,10:28:99:240,0,299	0/0:21,4:21:10.80:0,11,144	1/1:22,3:16:3.13:89,3,0	0/0:23,0:18:8.16:0,8,124	0/1:16,0:10:11.37:11,0,32	0/1:14,5:11:85.58:121,0,86	0/0:18,1:18:18.85:0,19,411	0/1:46,3:31:50.30:50,0,127	0/1:27,5:27:36.51:37,0,464	0/1:16,10:25:79.45:79,0,309	0/1:26,4:15:1.28:60,0,1	0/0:27,1:26:3.69:0,4,524	0/1:45,4:34:40.67:41,0,781	0/1:9,2:11:22.30:22,0,87	0/0:6,0:4:3.91:0,4,73
chr10	7493009	.	T	TC	438.29	PASS	AB=0.863;AC=15;AF=0.268;AN=56;BaseQRankSum=9.378;DP=734;FS=1.657;HRun=2;HaplotypeScore=190.0253;InbreedingCoeff=-0.3402;MQ=44.67;MQ0=18;MQRankSum=-7.546;QD=1.28;ReadPosRankSum=0.793;VQSLOD=-0.7462;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:39,1:36:7.34:7,0,913	0/1:13,2:15:20.46:20,0,486	0/0:52,0:21:32.13:0,32,650	0/0:63,0:19:38.61:0,39,500	0/1:21,1:21:16.07:16,0,350	0/1:11,3:12:73.78:74,0,260	0/0:19,0:17:45.15:0,45,624	0/0:27,2:28:13.27:0,13,624	0/0:21,2:22:2.96:0,3,714	0/1:26,3:30:30.94:31,0,672	0/1:18,3:20:12.70:13,0,514	0/1:21,2:20:7.04:7,0,461	0/0:20,1:20:17.25:0,17,556	0/0:41,2:41:28.88:0,29,1079	0/0:27,2:28:22.81:0,23,920	0/0:25,1:26:36.53:0,37,803	0/1:22,2:23:0.96:1,0,659	0/0:15,0:13:30.07:0,30,392	0/1:16,2:17:22.58:23,0,450	0/1:16,5:20:58.92:59,0,435	0/0:35,0:30:51.08:0,51,646	0/1:23,7:28:90.87:91,0,676	0/1:17,6:22:48.65:49,0,354	0/0:26,1:24:53.53:0,54,700	0/1:15,7:22:99:145,0,506	0/1:28,3:27:2.63:3,0,660	0/0:10,0:10:17.63:0,18,246	0/1:4,2:6:48.07:48,0,106
chr10	7493010	.	T	TC	212.22	PASS	AB=0.851;AC=10;AF=0.179;AN=56;BaseQRankSum=9.482;DP=741;FS=3.215;HRun=2;HaplotypeScore=192.6248;InbreedingCoeff=-0.2179;MQ=43.77;MQ0=17;MQRankSum=-6.773;QD=1.05;ReadPosRankSum=0.570;VQSLOD=-0.6324;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:40,1:36:37.98:0,38,851	0/1:15,2:17:4.78:5,0,434	0/0:51,0:21:30.97:0,31,538	0/0:63,0:19:38.62:0,39,461	0/1:21,1:21:1:1,0,356	0/1:10,3:12:54.89:55,0,227	0/0:20,0:18:45.14:0,45,555	0/0:27,2:28:49.81:0,50,576	0/0:21,2:22:12.38:0,12,642	0/1:27,3:30:18.27:18,0,588	0/0:19,3:21:3.89:0,4,461	0/0:23,2:21:3.12:0,3,412	0/0:19,1:19:31.50:0,32,510	0/0:40,2:41:34.06:0,34,928	0/0:27,2:28:29.25:0,29,803	0/0:25,1:26:41.20:0,41,718	0/0:22,2:23:6.20:0,6,581	0/0:17,0:15:30.05:0,30,351	0/1:16,2:18:12.70:13,0,402	0/1:16,5:20:37.30:37,0,386	0/0:34,0:30:54.05:0,54,615	0/1:23,7:28:61.62:62,0,597	0/1:17,6:22:7.29:7,0,325	0/0:26,1:24:53.90:0,54,632	0/1:15,7:22:99:111,0,446	0/0:29,3:28:13.11:0,13,613	0/0:10,0:10:17.69:0,18,221	0/1:5,1:6:36.77:37,0,95
chr10	7493621	.	GAC	G	464.17	PASS	AB=0.868;AC=13;AF=0.250;AN=52;BaseQRankSum=-4.757;DP=626;FS=2.995;HRun=0;HaplotypeScore=106.1964;InbreedingCoeff=0.3666;MQ=65.87;MQ0=25;MQRankSum=1.631;QD=2.55;ReadPosRankSum=0.435;VQSLOD=2.1184;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:6:0,6,63	0/0:9,0:9:5.32:0,5,49	./.	./.	0/0:26,0:26:19.45:0,19,116	0/0:15,0:15:2.74:0,3,12	0/0:26,0:26:5.90:0,6,45	0/0:29,0:27:5.98:0,6,55	0/0:24,0:23:2.74:0,3,12	0/0:20,0:20:20.58:0,21,166	0/0:21,0:21:13.36:0,13,135	1/1:13,6:18:12.03:129,12,0	0/1:16,3:21:6.11:107,0,6	1/1:15,4:19:3:32,3,0	0/0:18,0:18:19.98:0,20,148	0/0:19,0:19:23.01:0,23,194	0/0:16,0:15:3:0,3,25	0/0:24,0:24:37.20:0,37,321	0/0:20,0:18:0.89:0,1,2	0/0:16,0:15:8.61:0,9,52	1/1:41,0:40:0.42:0,0,0	1/1:16,1:18:8.86:78,9,0	1/1:7,0:7:2.99:23,3,0	0/1:29,6:39:11.57:222,0,12	0/0:17,0:16:5.99:0,6,49	0/0:14,0:12:15.37:0,15,196	0/1:18,0:17:11.71:12,0,39	0/0:10,0:9:3:0,3,25
chr10	7493625	.	C	CACACACACACACACAT	2311.43	PASS	AB=0.967;AC=16;AF=0.296;AN=54;BaseQRankSum=-2.825;DP=665;FS=1.135;HRun=0;HaplotypeScore=235.3673;InbreedingCoeff=0.0874;MQ=64.42;MQ0=26;MQRankSum=-2.643;QD=8.41;ReadPosRankSum=-0.844;VQSLOD=2.5633;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:26:44.35:217,0,44	0/0:10,0:10:7.63:0,8,74	0/0:38,0:13:2.52:0,3,44	0/0:58,0:24:9.63:0,10,84	0/0:25,0:25:12.46:0,12,153	0/0:24,0:24:5.20:0,5,26	1/1:26,0:26:17.75:270,18,0	0/0:27,0:25:7.99:0,8,119	./.	0/1:18,0:18:20.65:21,0,85	0/1:21,0:21:25.79:26,0,40	0/0:21,0:20:29.91:0,30,464	0/0:22,0:22:42.44:0,42,689	0/0:22,0:22:32.17:0,32,340	0/0:19,0:19:19.60:0,20,325	0/0:19,0:19:17.49:0,17,278	0/1:17,0:16:9.01:166,0,9	0/1:22,0:22:36.10:36,0,638	0/1:19,0:17:5.68:114,0,6	0/1:17,0:16:36.56:37,0,37	0/1:44,0:43:29.69:230,0,30	0/0:21,0:21:38.90:0,39,496	0/0:10,0:10:17.46:0,17,135	0/0:42,0:42:78.68:0,79,1192	0/1:18,0:17:26.51:163,0,27	1/1:16,0:14:18.67:500,19,0	1/1:18,0:17:22.07:478,22,0	0/1:6,5:11:17.91:224,0,18
chr10	7493627	.	C	CACACACACACACAT	2203.82	PASS	AB=0.929;AC=16;AF=0.296;AN=54;BaseQRankSum=-2.055;DP=671;FS=0.000;HRun=0;HaplotypeScore=219.3509;InbreedingCoeff=-0.1006;MQ=63.00;MQ0=27;MQRankSum=-2.471;QD=7.23;ReadPosRankSum=0.468;VQSLOD=2.1774;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:25:39.69:225,0,40	0/0:10,0:10:7.89:0,8,61	0/0:38,0:13:2.52:0,3,44	0/0:56,0:22:9.50:0,10,84	0/0:27,0:27:12.34:0,12,118	0/1:24,0:24:15.67:16,0,18	1/1:24,0:24:5.44:266,5,0	0/0:22,0:20:10.88:0,11,138	./.	0/1:18,0:18:26.07:26,0,74	0/1:20,0:20:25.61:26,0,44	0/0:22,0:21:41.88:0,42,549	0/0:21,0:21:44.96:0,45,673	0/0:22,0:22:35.16:0,35,349	0/0:19,0:19:19.59:0,20,257	0/0:19,0:19:17.47:0,17,209	0/1:5,12:18:9.01:198,0,9	0/1:23,0:23:39.24:39,0,521	0/1:20,0:17:27.06:96,0,27	0/1:16,0:15:36.96:37,0,38	0/1:42,0:41:9.78:232,0,10	0/0:21,0:21:44.41:0,44,513	0/0:12,0:12:23.10:0,23,194	0/0:45,0:45:85.65:0,86,1168	0/1:7,16:27:26.51:196,0,27	0/1:17,0:15:26.60:374,0,27	1/1:18,0:17:22.07:455,22,0	0/1:10,0:9:17.95:179,0,18
chr10	7493635	.	C	CACAT	3017.39	PASS	AB=0.887;AC=20;AF=0.357;AN=56;BaseQRankSum=-3.230;DP=664;FS=2.695;HRun=0;HaplotypeScore=121.2341;InbreedingCoeff=-0.0420;MQ=58.09;MQ0=29;MQRankSum=1.379;QD=8.29;ReadPosRankSum=3.737;VQSLOD=2.7229;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:26:25.85:124,0,26	0/1:1,10:11:4.03:150,0,4	0/0:33,0:7:11.79:0,12,92	0/0:49,0:19:18.04:0,18,162	0/1:4,23:28:12.82:225,0,13	0/1:22,0:22:6.27:6,0,46	0/1:26,0:26:7.80:8,0,223	0/1:26,0:24:47.24:238,0,47	0/1:32,0:31:17.84:18,0,19	1/1:12,0:22:12.77:455,13,0	1/1:17,0:17:30.04:488,30,0	0/0:21,0:20:44.97:0,45,414	0/0:19,0:19:47.89:0,48,438	0/0:22,0:22:35.92:0,36,298	1/1:4,15:21:10.04:302,10,0	0/1:5,16:21:8.93:376,0,9	0/1:17,0:16:35.93:43,0,36	0/1:16,6:22:43.56:641,0,44	0/0:19,0:15:22.58:0,23,217	0/0:16,0:15:12.10:0,12,91	0/0:41,0:40:51.51:0,52,365	0/0:22,0:22:47.93:0,48,416	0/0:12,0:12:29.21:0,29,237	0/0:45,0:45:99:0,103,906	0/1:29,0:28:45.88:46,0,52	0/1:18,0:16:12.82:13,0,169	0/1:17,0:16:40.34:40,0,141	0/1:8,0:7:20.21:20,0,71
chr10	7493637	.	C	CAT	1695.93	PASS	AB=0.987;AC=17;AF=0.304;AN=56;BaseQRankSum=1.911;DP=660;FS=4.191;HRun=0;HaplotypeScore=109.6210;InbreedingCoeff=0.0128;MQ=56.35;MQ0=28;MQRankSum=1.111;QD=5.03;ReadPosRankSum=4.777;VQSLOD=2.0171;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:27:37.19:118,0,37	0/1:11,0:11:3.83:59,0,4	0/0:32,0:7:13.98:0,14,109	0/0:47,0:18:23.51:0,24,185	1/1:27,0:27:2.52:101,3,0	0/1:22,0:22:0.54:1,0,46	0/1:27,0:27:0.64:1,0,261	0/1:27,0:25:99:159,0,136	0/1:29,0:28:6.19:6,0,19	0/1:21,0:21:70.93:249,0,71	1/1:17,0:17:28.39:262,28,0	0/0:20,0:19:44.92:0,45,365	0/0:19,0:19:47.73:0,48,375	0/0:22,0:22:39.07:0,39,312	0/1:19,2:21:3.11:221,0,3	0/1:20,1:21:10.98:189,0,11	0/1:17,0:16:17.90:18,0,36	0/1:22,1:23:4.07:423,0,4	0/0:21,0:17:26.39:0,26,253	0/0:16,0:15:15.06:0,15,110	0/0:37,0:36:51.34:0,51,367	0/0:22,0:22:47.58:0,48,383	0/0:12,0:12:29.29:0,29,236	0/0:47,0:47:99:0,107,828	0/1:28,0:27:32.58:33,0,49	0/0:18,0:16:7.84:0,8,188	0/1:18,0:17:13.75:14,0,169	0/0:8,0:7:5.05:0,5,77
chr10	7495894	.	AT	A	6627.58	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=3.776;DP=399;FS=80.440;HRun=1;HaplotypeScore=48.1328;InbreedingCoeff=0.9363;MQ=36.54;MQ0=29;MQRankSum=-8.695;QD=29.99;ReadPosRankSum=-1.053;VQSLOD=-0.1023;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,17:17:24.08:333,24,0	1/1:0,8:8:18.06:250,18,0	0/0:26,0:8:24.08:0,24,375	0/0:31,0:10:20.94:0,21,300	1/1:0,18:15:36.12:496,36,0	1/1:0,9:8:24.08:323,24,0	1/1:0,11:11:24.08:333,24,0	1/1:0,8:8:24.08:333,24,0	1/1:2,8:8:15.05:208,15,0	1/1:0,13:13:33.06:435,33,0	1/1:0,9:9:21.07:290,21,0	0/0:25,0:24:54.16:0,54,814	0/0:21,0:18:45.09:0,45,682	0/0:13,1:10:21.07:0,21,335	1/1:1,9:9:21.05:273,21,0	1/1:0,9:8:21.07:291,21,0	1/1:1,4:4:6.02:83,6,0	1/1:1,16:15:30.10:418,30,0	1/1:1,8:8:21.03:255,21,0	1/1:0,8:8:21.07:283,21,0	1/1:0,5:4:9.03:125,9,0	0/0:24,0:23:48.03:0,48,759	0/0:19,0:16:36.12:0,36,559	0/0:17,0:17:48.11:0,48,680	1/1:0,16:16:42.14:577,42,0	1/1:0,19:17:48.06:622,48,0	1/1:0,18:18:51.17:697,51,0	1/1:1,0:1:0.89:2,1,0
chr10	7496262	.	T	TACCC	21350.36	PASS	AB=0.615;AC=51;AF=0.911;AN=56;BaseQRankSum=-4.923;DP=366;FS=42.189;HRun=0;HaplotypeScore=61.1504;InbreedingCoeff=0.7729;MQ=52.22;MQ0=3;MQRankSum=-3.295;QD=62.25;ReadPosRankSum=3.429;VQSLOD=3.3040;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,14:17:30.10:832,30,0	1/1:0,6:7:15.05:419,15,0	0/0:14,0:12:32.22:0,32,557	0/0:8,0:7:20.97:0,21,336	1/1:4,12:17:27.09:740,27,0	1/1:4,9:13:30.10:812,30,0	1/1:1,5:7:15.05:418,15,0	0/1:9,13:22:2.73:1318,0,3	1/1:1,7:8:21.07:586,21,0	1/1:1,13:16:45.15:1232,45,0	1/1:4,8:14:21.07:577,21,0	1/1:1,9:9:27.06:690,27,0	1/1:2,6:10:20.81:585,21,0	1/1:2,5:9:18.06:501,18,0	1/1:1,8:9:21.07:585,21,0	1/1:1,8:9:27.09:745,27,0	1/1:1,20:21:57.20:1594,57,0	1/1:3,12:16:36.12:1007,36,0	1/1:6,10:17:48.09:1156,48,0	1/1:4,11:15:39.13:1075,39,0	1/1:4,5:8:15.05:418,15,0	1/1:2,11:14:36.08:923,36,0	1/1:3,13:17:42.14:1156,42,0	1/1:2,6:10:15.01:418,15,0	1/1:1,17:22:48.16:1331,48,0	1/1:3,11:14:36.12:1000,36,0	1/1:0,12:14:38.98:1086,39,0	1/1:0,1:2:6.02:145,6,0
chr10	7496453	.	T	TC	12352.30	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-5.023;DP=479;FS=0.843;HRun=4;HaplotypeScore=54.7594;InbreedingCoeff=0.9849;MQ=85.54;MQ0=0;MQRankSum=-2.844;QD=35.29;ReadPosRankSum=2.013;VQSLOD=5.3321;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,31:32:81.27:1106,81,0	1/1:0,5:5:12.04:164,12,0	0/0:17,0:17:48.08:0,48,507	0/0:18,0:18:32.27:0,32,344	1/1:0,10:10:27.09:369,27,0	1/1:1,14:15:33.11:451,33,0	1/1:1,22:23:57.19:773,57,0	1/1:4,19:23:57.19:778,57,0	1/1:1,20:21:60.20:820,60,0	1/1:0,11:11:33.11:449,33,0	1/1:1,4:5:15.04:191,15,0	0/0:24,0:24:66.17:0,66,739	0/0:14,0:14:39.09:0,39,432	0/0:20,0:20:57.16:0,57,646	1/1:0,17:17:45.15:615,45,0	1/1:0,19:19:50.96:696,51,0	1/1:2,22:24:60.20:821,60,0	1/1:2,12:14:27.09:369,27,0	1/1:2,18:20:54.18:731,54,0	1/1:1,9:10:24.08:327,24,0	1/1:0,33:33:93.31:1271,93,0	0/0:11,0:11:33.09:0,33,374	0/0:7,0:7:18.03:0,18,195	0/0:18,0:18:54.15:0,54,613	1/1:1,15:16:39.13:533,39,0	1/1:0,21:21:63.17:826,63,0	1/1:1,26:27:66.08:896,66,0	1/1:0,4:4:12.04:164,12,0
chr10	7497531	.	T	TAA	6560.88	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-11.787;DP=471;FS=3.281;HRun=9;HaplotypeScore=52.1994;InbreedingCoeff=0.9416;MQ=70.17;MQ0=0;MQRankSum=-1.157;QD=35.27;ReadPosRankSum=0.966;VQSLOD=4.8684;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:51.10:0,51,543	0/0:13,0:13:36.06:0,36,373	0/0:11,0:8:5.69:0,6,35	0/0:4,0:4:3:0,3,32	0/0:27,0:27:69.10:0,69,717	1/1:1,14:17:47.13:664,47,0	1/1:2,8:10:18.06:277,18,0	0/0:24,0:24:60.10:0,60,631	1/1:2,15:17:42.14:647,42,0	0/0:22,0:22:66.16:0,66,699	0/0:25,0:25:72.18:0,72,766	0/0:11,0:11:20.24:0,20,234	0/0:17,0:17:51.13:0,51,543	0/0:14,0:14:33.04:0,33,351	0/0:19,0:19:48.10:0,48,511	0/0:10,0:10:27.07:0,27,287	1/1:2,20:25:51.17:754,51,0	0/0:12,0:12:36.09:0,36,383	1/1:5,16:22:32.69:743,33,0	1/1:2,26:29:80.76:1203,81,0	1/1:1,2:3:6.02:92,6,0	0/0:20,0:20:54.13:0,54,575	0/0:23,0:23:66.15:0,66,694	0/0:10,0:10:27.05:0,27,280	1/1:0,13:13:33.11:508,33,0	1/1:5,12:19:41.11:570,41,0	1/1:3,18:23:54.04:780,54,0	1/1:0,8:8:21.07:323,21,0
chr10	7498923	.	AC	A	3578.10	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=8.692;DP=467;FS=9.267;HRun=6;HaplotypeScore=46.1762;InbreedingCoeff=0.9949;MQ=83.99;MQ0=0;MQRankSum=-2.586;QD=26.90;ReadPosRankSum=1.094;VQSLOD=3.5366;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:81.23:0,81,1034	0/0:11,0:11:30.08:0,30,379	0/0:18,0:18:29.74:0,30,461	0/0:13,0:13:23.21:0,23,240	0/0:13,0:13:36.12:0,36,472	1/1:1,19:20:54.13:580,54,0	1/1:1,23:24:60.15:645,60,0	0/0:25,0:25:60.17:0,60,762	1/1:1,16:17:45.11:483,45,0	0/0:11,0:11:33.11:0,33,434	0/0:12,0:12:33.03:0,33,419	0/0:31,0:31:87.28:0,87,1145	0/0:12,0:12:21.07:0,21,276	0/0:20,0:20:54.17:0,54,704	0/0:13,0:13:39.13:0,39,513	0/0:12,0:12:30.08:0,30,378	1/1:2,27:29:75.19:806,75,0	0/0:22,0:22:60.19:0,60,787	1/1:4,15:19:36.08:387,36,0	1/1:1,9:10:27.07:289,27,0	0/0:26,0:26:72.20:0,72,917	0/0:10,0:10:27.09:0,27,353	0/0:11,0:11:30.10:0,30,394	0/0:16,0:16:39.13:0,39,512	1/1:1,13:14:36.09:387,36,0	0/0:10,0:10:30.10:0,30,395	0/0:13,0:12:39.11:0,39,498	0/0:5,0:5:15.05:0,15,197
chr10	7499615	.	G	GT	2380.48	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-11.571;DP=579;FS=2.858;HRun=7;HaplotypeScore=74.7590;InbreedingCoeff=0.9977;MQ=79.68;MQ0=0;MQRankSum=0.989;QD=28.34;ReadPosRankSum=1.107;VQSLOD=4.4126;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:66.10:0,66,637	0/0:9,0:9:24.04:0,24,232	0/0:17,0:17:36.04:0,36,347	0/0:13,0:13:33.05:0,33,317	0/0:24,0:24:63.07:0,63,600	0/0:21,0:20:54.08:0,54,520	0/0:11,0:11:30.03:0,30,284	0/0:30,0:30:84.12:0,84,807	0/0:15,0:15:39.06:0,39,376	0/0:30,0:30:78.11:0,78,750	0/0:28,0:28:78.11:0,78,748	0/0:23,0:23:63.09:0,63,603	0/0:22,0:22:54.09:0,54,521	0/0:20,0:20:48.07:0,48,463	0/0:22,0:22:66.11:0,66,637	0/0:21,0:21:63.08:0,63,598	0/0:18,0:17:48.08:0,48,463	0/0:11,0:11:30.03:0,30,284	0/0:18,0:18:51.08:0,51,498	0/0:25,0:25:66.11:0,66,637	1/1:2,9:12:29.96:341,30,0	0/0:19,0:19:48.07:0,48,462	0/0:20,0:20:48.07:0,48,464	0/0:21,0:21:45.07:0,45,434	0/0:28,0:29:71.13:0,71,666	1/1:0,22:22:63.18:750,63,0	1/1:2,38:40:99:1196,99,0	1/1:3,7:10:21.06:254,21,0
chr10	7499642	.	A	ATTT	8063.86	PASS	AB=0.958;AC=29;AF=0.518;AN=56;BaseQRankSum=-0.630;DP=586;FS=9.063;HRun=9;HaplotypeScore=94.8192;InbreedingCoeff=0.9222;MQ=77.66;MQ0=0;MQRankSum=-1.171;QD=25.60;ReadPosRankSum=-0.585;VQSLOD=2.6140;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:25:26.32:92,26,0	0/0:10,0:10:27.07:0,27,340	0/1:22,0:20:19.48:19,0,385	0/0:15,0:14:12.75:0,13,239	0/0:24,0:23:66.20:0,66,831	1/1:3,18:20:45.15:887,45,0	1/1:5,7:12:24.08:465,24,0	0/0:28,0:28:69.10:0,69,813	1/1:4,12:17:36.12:708,36,0	0/0:36,0:35:90.24:0,90,1113	0/0:24,0:24:63.12:0,63,770	1/1:4,0:17:35.86:276,36,0	1/1:5,0:24:43.89:329,44,0	1/1:1,0:19:50.31:373,50,0	0/0:23,0:23:60.16:0,60,758	0/0:24,0:24:69.22:0,69,869	1/1:1,17:19:51.14:936,51,0	0/0:12,0:12:30.08:0,30,379	1/1:3,14:19:48.02:788,48,0	1/1:9,12:21:36.12:679,36,0	0/0:9,0:9:21.05:0,21,261	1/1:2,1:21:50.87:444,51,0	1/1:2,0:19:50.81:392,51,0	1/1:2,0:19:31.13:232,31,0	1/1:8,30:38:75.25:1444,75,0	0/0:24,0:24:66.16:0,66,820	0/0:34,0:34:84.23:0,84,1030	0/0:8,0:8:15.04:0,15,190
chr10	7499964	.	TC	T	20636.16	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=9.813;DP=735;FS=2.554;HRun=1;HaplotypeScore=99.3158;InbreedingCoeff=1.0000;MQ=92.28;MQ0=0;MQRankSum=-6.078;QD=38.50;ReadPosRankSum=3.243;VQSLOD=5.2422;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,132,2085	1/1:0,18:18:48.16:671,48,0	0/0:28,0:28:84.22:0,84,1260	0/0:37,0:37:99:0,102,1524	1/1:1,31:32:90.30:1250,90,0	1/1:0,17:17:45.15:629,45,0	1/1:0,23:23:69.23:965,69,0	1/1:0,36:36:99:1511,108,0	1/1:1,30:31:75.25:1049,75,0	1/1:1,29:30:90.28:1225,90,0	1/1:0,18:18:45.15:629,45,0	1/1:0,31:31:84.28:1175,84,0	1/1:1,20:21:51.17:704,51,0	1/1:0,25:25:69.23:965,69,0	1/1:0,35:35:93.31:1300,93,0	1/1:0,40:40:99:1553,111,0	1/1:0,33:33:96.32:1343,96,0	1/1:0,19:19:48.16:667,48,0	1/1:1,22:23:69.23:958,69,0	1/1:0,26:26:72.20:982,72,0	0/0:30,0:30:90.29:0,90,1413	1/1:0,21:21:57.19:797,57,0	1/1:0,21:21:56.84:794,57,0	1/1:0,20:20:60.20:839,60,0	1/1:0,16:16:45.15:629,45,0	0/0:23,0:23:69.24:0,69,1104	0/0:24,0:24:72.23:0,72,1126	0/0:13,0:13:39.13:0,39,623
chr10	7500165	.	GCACACA	G	2541.67	PASS	AB=0.853;AC=21;AF=0.404;AN=52;BaseQRankSum=-0.907;DP=494;FS=18.617;HRun=0;HaplotypeScore=124.2461;InbreedingCoeff=0.6346;MQ=65.25;MQ0=9;MQRankSum=-6.197;QD=13.52;ReadPosRankSum=2.373;VQSLOD=1.8493;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:31:26.54:307,27,0	1/1:8,1:9:3.01:61,3,0	./.	./.	1/1:4,4:9:15.05:249,15,0	0/0:19,0:20:24.08:0,24,493	0/0:17,0:19:30.10:0,30,753	0/0:16,0:16:1.25:0,1,3	0/0:14,0:15:21.07:0,21,499	1/1:16,1:17:3.47:71,3,0	1/1:11,3:16:15.05:261,15,0	0/0:18,0:17:8.64:0,9,200	0/0:15,0:15:6.02:0,6,126	0/0:21,0:19:6.02:0,6,160	1/1:11,5:20:13.08:477,13,0	0/1:12,6:19:79.23:585,0,79	0/0:22,0:29:51.99:0,52,1192	0/1:11,1:12:29.10:55,0,29	0/0:8,0:8:6:0,6,120	0/0:19,0:19:18.06:0,18,453	0/1:15,2:16:0:0,0,0	0/0:14,0:14:6.01:0,6,64	0/0:21,0:21:11.95:0,12,259	0/0:27,0:25:24.08:0,24,480	0/0:13,0:16:27.09:0,27,716	1/1:18,0:19:15.87:235,16,0	1/1:4,2:5:9.03:180,9,0	1/1:8,3:10:12.04:243,12,0
chr10	7500237	.	T	TA	14475.79	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-7.360;DP=581;FS=19.983;HRun=8;HaplotypeScore=80.0757;InbreedingCoeff=0.9920;MQ=80.72;MQ0=1;MQRankSum=-6.259;QD=28.44;ReadPosRankSum=3.577;VQSLOD=3.4814;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,34:36:70.74:1048,71,0	1/1:3,11:14:33.10:381,33,0	0/0:34,0:30:22.57:0,23,281	0/0:37,0:33:19.26:0,19,309	1/1:2,25:27:72.09:785,72,0	1/1:2,16:18:45.13:519,45,0	1/1:5,15:20:38.63:449,39,0	1/1:3,19:22:60.15:674,60,0	1/1:3,12:15:33.10:381,33,0	1/1:6,20:26:66.18:749,66,0	1/1:3,15:18:42.12:484,42,0	1/1:2,8:10:27.05:297,27,0	1/1:1,12:13:33.10:381,33,0	1/1:2,17:19:48.14:554,48,0	1/1:4,17:21:48.14:554,48,0	1/1:4,14:18:39.12:450,39,0	1/1:3,34:38:99:1122,99,0	1/1:1,17:18:48.14:553,48,0	1/1:4,13:17:42.07:458,42,0	1/1:3,20:24:60.01:672,60,0	1/1:3,11:14:27.08:312,27,0	1/1:1,12:13:33.10:381,33,0	1/1:1,16:17:23.74:526,24,0	1/1:0,22:22:56.85:657,57,0	1/1:3,14:17:42.12:484,42,0	1/1:2,19:21:63.17:708,63,0	1/1:1,19:20:51.15:589,51,0	1/1:1,10:11:27.08:309,27,0
chr10	7500903	.	A	AAC	3051.68	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=12.121;DP=762;FS=12.343;HRun=0;HaplotypeScore=98.2549;InbreedingCoeff=0.9999;MQ=82.29;MQ0=0;MQRankSum=-5.032;QD=47.68;ReadPosRankSum=1.871;VQSLOD=4.2531;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,58:64:99:3147,178,0	0/0:19,0:19:48.14:0,48,693	0/0:29,0:29:78.24:0,78,1114	0/0:21,0:21:60.12:0,60,839	0/0:27,0:27:78.25:0,78,1174	0/0:25,0:25:75.24:0,75,1125	0/0:22,0:22:63.20:0,63,945	0/0:26,0:26:72.23:0,72,1081	0/0:27,0:27:81.26:0,81,1219	0/0:29,0:29:87.24:0,87,1270	0/0:18,0:18:54.18:0,54,827	0/0:25,0:25:75.25:0,75,1129	0/0:41,0:41:99:0,123,1843	0/0:30,0:30:90.30:0,90,1357	0/0:29,0:29:87.29:0,87,1313	0/0:25,0:25:72.23:0,72,1079	0/0:41,0:41:99:0,117,1748	0/0:16,0:16:48.13:0,48,708	0/0:26,0:26:69.21:0,69,996	0/0:27,0:27:81.28:0,81,1239	0/0:36,0:36:99:0,105,1588	0/0:29,0:29:87.28:0,87,1311	0/0:15,0:15:39.13:0,39,596	0/0:23,0:23:69.23:0,69,1057	0/0:19,0:19:54.18:0,54,809	0/0:34,0:34:99:0,99,1516	0/0:22,0:22:63.21:0,63,943	0/0:17,0:17:51.17:0,51,781
chr10	7501813	.	GTA	G	6668.84	PASS	AB=1.000;AC=29;AF=0.537;AN=54;BaseQRankSum=15.574;DP=488;FS=0.000;HRun=0;HaplotypeScore=89.3642;InbreedingCoeff=0.9202;MQ=63.03;MQ0=1;MQRankSum=-2.317;QD=23.90;ReadPosRankSum=4.175;VQSLOD=5.1304;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,14:14:36.12:463,36,0	0/0:10,0:10:27.08:0,27,426	./.	0/1:12,0:7:12.61:13,0,22	0/0:23,0:23:60.19:0,60,965	1/1:5,10:15:27.07:334,27,0	1/1:2,9:11:21.07:261,21,0	0/0:49,0:49:99:0,114,1850	1/1:2,17:19:39.13:501,39,0	0/0:26,0:26:63.21:0,63,1037	0/0:15,0:15:33.11:0,33,554	1/1:2,17:19:33.11:425,33,0	1/1:4,23:27:48.16:617,48,0	1/1:3,18:21:33.11:424,33,0	0/0:16,0:15:38.33:0,38,577	0/0:9,0:9:24.08:0,24,387	1/1:1,24:25:63.20:802,63,0	0/0:14,0:14:27.09:0,27,455	1/1:3,12:14:33.08:397,33,0	1/1:7,29:34:57.18:733,57,0	0/0:6,0:6:15.05:0,15,253	1/1:0,15:15:39.13:502,39,0	1/1:3,22:25:48.15:617,48,0	1/1:1,6:7:12.92:156,13,0	1/1:4,13:17:33.11:425,33,0	0/0:14,0:14:33.11:0,33,528	0/0:22,0:22:57.18:0,57,933	0/0:5,0:5:15.03:0,15,225
chr10	7502432	.	A	ATTTT	6571.30	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=8.444;DP=550;FS=3.308;HRun=1;HaplotypeScore=116.1578;InbreedingCoeff=0.9866;MQ=52.89;MQ0=0;MQRankSum=-11.435;QD=63.80;ReadPosRankSum=0.031;VQSLOD=4.9205;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:51.18:0,51,1001	0/0:21,0:21:57.20:0,57,1119	0/0:18,0:14:39.13:0,39,719	0/0:18,0:17:45.13:0,45,806	0/0:39,0:39:96.33:0,96,1857	1/1:4,9:11:30.10:784,30,0	1/1:3,5:7:18.06:475,18,0	0/0:28,0:26:72.20:0,72,1334	1/1:2,12:14:30.10:816,30,0	0/0:23,0:23:69.19:0,69,1275	0/0:25,0:25:72.22:0,72,1346	0/0:14,0:14:39.13:0,39,756	0/0:20,0:20:54.18:0,54,1060	0/0:19,0:18:42.14:0,42,803	0/0:17,0:16:45.14:0,45,849	0/0:21,0:20:57.18:0,57,1070	1/1:2,7:9:18.06:466,18,0	0/0:18,0:16:42.10:0,42,782	1/1:2,4:5:12.04:328,12,0	1/1:3,28:32:84.29:2252,84,0	0/0:11,0:11:27.05:0,27,481	0/0:29,0:29:81.28:0,81,1582	0/0:32,0:32:90.31:0,90,1752	0/0:6,0:6:15.05:0,15,294	1/1:1,19:20:54.19:1450,54,0	0/0:29,0:29:75.18:0,75,1337	0/0:33,0:32:93.30:0,93,1773	0/0:7,0:7:17.72:0,18,304
chr10	7502994	.	G	GT	7129.07	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-15.021;DP=713;FS=1.017;HRun=4;HaplotypeScore=89.8165;InbreedingCoeff=0.9821;MQ=61.71;MQ0=2;MQRankSum=3.862;QD=35.82;ReadPosRankSum=0.156;VQSLOD=4.7105;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,121,1387	1/1:1,2:3:6.02:82,6,0	0/0:30,0:22:60.16:0,60,667	0/0:43,0:35:90.18:0,90,995	1/1:2,28:30:81.19:1065,81,0	0/0:27,0:27:81.23:0,81,918	0/0:16,0:16:42.12:0,42,476	1/1:2,38:39:99:1428,105,0	0/0:21,0:21:60.14:0,60,659	1/1:1,20:21:57.19:779,57,0	1/1:2,32:34:99:1353,102,0	0/0:13,0:13:36.10:0,36,405	0/0:23,0:23:66.19:0,66,748	0/0:22,0:22:54.15:0,54,610	1/1:2,27:29:69.23:944,69,0	1/1:0,14:14:36.12:493,36,0	0/0:35,0:35:90.25:0,90,1019	1/1:1,27:28:72.24:985,72,0	0/0:28,0:28:76.10:0,76,852	0/0:32,0:32:93.26:0,93,1055	0/0:17,0:17:51.13:0,51,566	0/0:23,0:23:66.19:0,66,748	0/0:20,0:20:48.13:0,48,544	0/0:14,0:14:36.09:0,36,399	0/0:15,0:15:42.10:0,42,463	0/0:37,2:39:26.18:0,26,1055	0/0:37,0:37:99:0,108,1224	0/0:13,0:13:39.11:0,39,442
chr10	7503299	.	G	GT	13426.99	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-10.098;DP=699;FS=1.032;HRun=7;HaplotypeScore=66.3486;InbreedingCoeff=0.9892;MQ=57.78;MQ0=4;MQRankSum=1.923;QD=29.71;ReadPosRankSum=1.649;VQSLOD=5.4147;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,26:28:76.41:890,76,0	1/1:1,7:8:15.05:181,15,0	0/0:21,0:13:13.23:0,13,142	0/0:18,0:9:12.48:0,12,114	1/1:3,26:29:69.21:834,69,0	0/0:35,0:35:96.08:0,96,900	0/0:23,0:23:60.08:0,60,575	1/1:7,14:19:33.09:389,33,0	0/0:27,0:27:66.09:0,66,637	1/1:1,30:31:90.24:1062,90,0	1/1:3,23:26:69.21:833,69,0	1/1:1,17:18:48.15:580,48,0	1/1:2,14:17:45.14:543,45,0	1/1:5,24:29:66.20:789,66,0	1/1:2,25:27:72.22:870,72,0	1/1:1,23:24:63.19:761,63,0	0/0:26,0:26:75.07:0,75,706	1/1:3,9:11:30.07:349,30,0	0/0:33,0:28:75.02:0,75,711	0/0:40,0:40:99:0,105,1009	1/1:3,12:15:30.09:362,30,0	1/1:3,29:32:84.26:1015,84,0	1/1:3,22:25:54.64:653,55,0	1/1:3,17:20:51.16:616,51,0	0/0:23,0:23:57.08:0,57,550	1/1:2,29:31:87.27:1050,87,0	1/1:4,36:40:91.22:1185,91,0	1/1:7,12:19:39.12:465,39,0
chr10	7504298	.	G	GT	3576.45	PASS	AB=0.560;AC=14;AF=0.250;AN=56;BaseQRankSum=-7.995;DP=586;FS=3.227;HRun=11;HaplotypeScore=66.6623;InbreedingCoeff=0.7496;MQ=61.91;MQ0=3;MQRankSum=2.215;QD=20.44;ReadPosRankSum=-0.901;VQSLOD=4.4226;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:21:15.12:0,15,276	0/1:1,3:6:8.37:91,0,8	0/0:10,0:5:3.49:0,3,55	0/0:10,0:7:7.42:0,7,51	1/1:4,22:27:39.70:558,40,0	0/0:23,0:24:37.85:0,38,422	0/0:14,1:16:4.41:0,4,204	1/1:8,22:29:24.67:556,25,0	0/0:25,0:26:61.80:0,62,470	0/1:7,20:27:20.80:537,0,21	1/1:5,18:24:53.90:521,54,0	0/0:20,0:20:53.79:0,54,418	0/0:12,0:12:32.86:0,33,255	0/0:14,1:16:10.26:0,10,244	1/1:7,18:25:30.88:495,31,0	1/1:2,17:21:47.76:455,48,0	0/0:22,0:22:41.14:0,41,293	1/1:3,12:15:36.07:365,36,0	0/0:25,0:22:21.76:0,22,267	0/0:34,0:34:83.49:0,83,633	0/0:11,0:14:24.95:0,25,174	0/0:21,0:20:50.78:0,51,391	0/0:33,1:34:54.52:0,55,569	0/0:20,0:20:36.01:0,36,337	0/0:23,1:24:24.59:0,25,367	0/0:21,1:23:19.61:0,20,320	0/0:28,3:31:44.24:0,44,524	0/0:6,0:8:19.02:0,19,128
chr10	7504811	.	G	GT	2144.88	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-0.576;DP=563;FS=1.624;HRun=7;HaplotypeScore=60.7378;InbreedingCoeff=0.9939;MQ=56.29;MQ0=10;MQRankSum=2.792;QD=27.15;ReadPosRankSum=-0.497;VQSLOD=4.1027;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:39.05:0,39,377	0/0:9,0:9:27.04:0,27,261	0/0:24,0:17:30.03:0,30,288	0/0:25,0:9:14.94:0,15,133	0/0:33,0:33:87.11:0,87,833	0/0:29,0:29:81.13:0,81,782	0/0:17,0:17:39.02:0,39,365	0/0:28,0:28:57.06:0,57,546	0/0:11,0:11:30.04:0,30,290	0/0:35,0:35:99:0,102,985	0/0:21,0:21:60.09:0,60,579	0/0:12,0:12:27.04:0,27,261	0/0:21,0:21:51.08:0,51,492	0/0:9,0:9:27.04:0,27,261	0/0:16,0:16:48.07:0,48,458	0/0:12,0:12:36.06:0,36,348	0/0:24,0:24:63.10:0,63,608	0/0:21,0:21:57.09:0,57,550	0/0:24,0:17:36.05:0,36,348	0/0:23,0:23:69.11:0,69,666	1/1:0,11:11:30.09:362,30,0	0/0:22,0:22:63.10:0,63,608	0/0:17,0:17:42.06:0,42,405	0/0:11,0:11:29.98:0,30,274	0/0:21,0:21:48.06:0,48,464	1/1:1,25:26:72.20:856,72,0	1/1:4,21:25:57.17:689,57,0	1/1:4,13:17:33.10:398,33,0
chr10	7506862	.	T	TA	5630.45	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-9.747;DP=618;FS=3.811;HRun=1;HaplotypeScore=68.5623;InbreedingCoeff=0.9992;MQ=59.42;MQ0=5;MQRankSum=-0.023;QD=39.93;ReadPosRankSum=3.074;VQSLOD=5.6546;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,26:30:48.50:1145,49,0	0/0:9,0:9:24.08:0,24,311	0/0:21,0:14:42.03:0,42,482	0/0:18,0:13:36.12:0,36,465	0/0:35,0:35:96.29:0,96,1222	0/0:25,0:25:69.19:0,69,865	0/0:20,0:20:51.15:0,51,647	0/0:27,0:26:69.21:0,69,882	0/0:23,0:23:63.18:0,63,801	0/0:24,0:24:63.17:0,63,789	0/0:10,0:10:27.09:0,27,350	1/1:0,16:16:48.16:719,48,0	1/1:1,24:26:75.25:1118,75,0	1/1:1,15:16:42.14:629,42,0	0/0:27,0:27:81.25:0,81,1035	0/0:27,0:27:78.24:0,78,991	0/0:27,0:27:78.16:0,78,963	0/0:25,0:25:68.60:0,69,856	0/0:35,0:30:84.26:0,84,1076	0/0:30,0:30:75.22:0,75,944	0/0:18,0:18:54.18:0,54,700	1/1:1,20:22:54.10:780,54,0	1/1:2,15:17:48.16:708,48,0	1/1:1,13:14:36.12:532,36,0	0/0:26,0:26:78.23:0,78,975	0/0:20,0:20:57.19:0,57,739	0/0:21,0:21:63.19:0,63,798	0/0:9,0:9:26.91:0,27,307
chr10	7507421	.	GCC	G	1898.38	PASS	AB=0.736;AC=26;AF=0.464;AN=56;BaseQRankSum=-0.709;DP=365;FS=1.221;HRun=12;HaplotypeScore=57.3361;InbreedingCoeff=0.6739;MQ=82.81;MQ0=2;MQRankSum=-0.742;QD=10.67;ReadPosRankSum=1.765;VQSLOD=1.5283;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:14,2:21:15.66:16,0,39	1/1:4,4:8:12:122,12,0	0/0:42,0:24:28.85:0,29,426	0/0:24,0:18:21.21:0,21,247	1/1:3,14:17:39.07:396,39,0	0/0:14,0:15:26.97:0,27,302	0/0:10,0:10:18.02:0,18,226	1/1:8,10:18:23.99:244,24,0	0/0:9,0:9:18.05:0,18,240	1/1:2,7:9:21.03:208,21,0	1/1:3,5:8:15.01:153,15,0	0/0:3,0:12:11.80:0,12,43	0/0:4,0:8:10.48:0,10,51	0/1:2,0:7:0.25:0,0,28	1/1:1,11:12:27.06:275,27,0	1/1:2,9:11:24.04:244,24,0	0/0:18,0:19:45.14:0,45,643	1/1:3,9:12:18.02:183,18,0	0/0:11,0:11:21.06:0,21,267	0/0:8,0:8:15.05:0,15,217	1/1:13,0:13:14.42:77,14,0	0/1:4,1:11:17.55:18,0,22	0/0:3,0:12:16.46:0,16,59	0/0:1,0:8:9.98:0,10,35	0/0:9,0:9:19.31:0,19,260	1/1:11,0:11:3.10:78,3,0	0/1:15,0:15:46.48:68,0,46	1/1:5,0:5:5.56:26,6,0
chr10	7507432	.	CCA	C	740	PASS	AB=0.930;AC=14;AF=0.250;AN=56;BaseQRankSum=6.936;DP=378;FS=3.529;HRun=0;HaplotypeScore=62.4439;InbreedingCoeff=0.2458;MQ=86.94;MQ0=2;MQRankSum=-0.210;QD=6.27;ReadPosRankSum=7.630;VQSLOD=2.1827;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:11,1:12:12.55:13,0,40	0/1:6,0:6:9.46:9,0,36	0/0:38,0:20:48.79:0,49,537	0/0:27,0:21:36.54:0,37,362	0/1:20,0:20:38.68:39,0,90	0/0:14,0:14:31.67:0,32,417	0/0:9,0:9:24.02:0,24,263	0/0:18,0:18:13.57:0,14,180	0/0:10,0:10:24:0,24,315	0/0:15,0:15:5.14:0,5,196	0/1:6,0:6:6.29:6,0,15	0/0:13,0:13:14.48:0,14,171	0/0:7,0:7:17.71:0,18,130	0/0:10,0:10:22.03:0,22,168	0/1:14,0:14:26.05:26,0,51	0/1:11,0:11:31.16:31,0,31	0/0:19,0:19:48.12:0,48,739	0/1:10,0:10:8.23:19,0,8	0/0:10,0:10:27.08:0,27,382	0/0:15,0:15:42.02:0,42,446	1/1:1,12:13:14.93:204,15,0	0/0:14,0:14:31.23:0,31,232	0/0:14,0:14:7.65:0,8,151	0/0:11,0:11:23.60:0,24,164	0/0:16,0:16:26.96:0,27,496	1/1:1,10:11:27.05:333,27,0	0/1:1,12:13:6.01:162,0,6	1/1:1,1:2:6:64,6,0
chr10	7508307	.	C	CAT	11205.80	PASS	AB=0.917;AC=19;AF=0.339;AN=56;BaseQRankSum=-13.460;DP=671;FS=1.353;HRun=0;HaplotypeScore=79.1012;InbreedingCoeff=0.8783;MQ=77.85;MQ0=0;MQRankSum=-0.539;QD=44.64;ReadPosRankSum=0.680;VQSLOD=5.9989;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,25:26:69.24:1292,69,0	1/1:0,15:15:33.11:619,33,0	0/0:15,0:15:36.05:0,36,462	0/0:13,0:13:1.37:0,1,414	1/1:0,26:27:63.22:1180,63,0	0/0:33,0:33:88.54:0,89,1268	0/0:21,0:21:63.21:0,63,925	1/1:3,36:41:99:2021,114,0	0/0:14,0:14:39.13:0,39,574	1/1:4,33:37:99:1893,102,0	1/1:2,18:21:48.16:878,48,0	0/0:30,0:30:90.30:0,90,1325	0/0:28,0:28:81.27:0,81,1191	0/0:24,0:24:69.22:0,69,992	1/1:1,28:29:78.27:1461,78,0	1/1:0,30:30:90.31:1685,90,0	0/0:22,0:22:63.19:0,63,907	1/1:2,1:3:8.82:124,9,0	0/0:30,0:30:81.21:0,81,1119	0/0:39,0:39:99:0,114,1648	0/0:25,0:25:72.24:0,72,1057	0/0:24,0:24:69.21:0,69,978	0/0:15,0:15:39.13:0,39,574	0/0:18,0:18:51.16:0,51,729	0/0:24,0:24:72.24:0,72,1053	0/1:20,2:22:52.22:52,0,735	0/0:32,0:32:90.30:0,90,1324	0/0:13,0:13:39.13:0,39,573
chr10	7508830	.	G	GC	24337.40	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-1.351;DP=643;FS=8.866;HRun=1;HaplotypeScore=148.2361;InbreedingCoeff=0.9833;MQ=85.51;MQ0=0;MQRankSum=-10.434;QD=40.70;ReadPosRankSum=7.091;VQSLOD=2.8510;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,26:26:66.22:988,66,0	1/1:1,10:11:30.10:449,30,0	0/0:23,0:23:64.95:0,65,723	0/0:22,0:22:15.25:0,15,542	1/1:1,45:45:99:1837,123,0	1/1:2,32:34:96.33:1436,96,0	1/1:2,11:13:33.11:492,33,0	1/1:2,27:29:81.27:1212,81,0	1/1:1,18:19:45.11:649,45,0	1/1:0,36:35:99:1528,105,0	1/1:2,28:30:78.26:1158,78,0	1/1:0,17:17:48.16:716,48,0	1/1:1,18:19:57.19:845,57,0	1/1:2,22:24:72.16:1020,72,0	1/1:1,17:18:48.16:719,48,0	1/1:0,24:24:66.22:987,66,0	1/1:1,17:18:48.16:713,48,0	1/1:0,6:6:18.06:265,18,0	1/1:1,19:20:57.17:827,57,0	1/1:0,29:30:90.23:1296,90,0	1/1:0,15:15:39.13:584,39,0	1/1:1,21:22:54.18:808,54,0	1/1:2,29:31:84.28:1253,84,0	1/1:2,10:12:33.07:468,33,0	1/1:0,23:23:69.23:1032,69,0	1/1:0,30:30:90.29:1328,90,0	1/1:5,33:39:99:1456,102,0	1/1:0,6:6:18.06:270,18,0
chr10	7509846	.	TA	T	16874.49	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=9.152;DP=714;FS=1.822;HRun=6;HaplotypeScore=105.4496;InbreedingCoeff=0.9937;MQ=91.01;MQ0=0;MQRankSum=-8.002;QD=27.71;ReadPosRankSum=4.690;VQSLOD=4.6378;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,138,1755	1/1:0,10:10:30.08:322,30,0	0/0:30,0:30:76.45:0,76,958	0/0:26,0:26:69.21:0,69,865	1/1:1,30:31:78.19:836,78,0	1/1:1,17:18:42.10:451,42,0	1/1:1,20:21:54.13:580,54,0	1/1:1,30:31:87.22:935,87,0	1/1:1,27:28:72.18:774,72,0	1/1:2,24:26:75.18:800,75,0	1/1:2,14:16:39.10:419,39,0	1/1:2,22:24:63.16:677,63,0	1/1:0,25:25:66.17:709,66,0	1/1:2,27:29:75.19:806,75,0	1/1:4,36:40:96.23:1032,96,0	1/1:1,24:25:66.17:709,66,0	1/1:3,21:24:60.15:645,60,0	1/1:1,6:7:15.04:161,15,0	1/1:0,19:19:57.14:613,57,0	1/1:0,27:27:81.20:869,81,0	1/1:3,42:45:99:1161,108,0	1/1:1,13:14:35.91:387,36,0	1/1:1,32:33:90.23:967,90,0	1/1:5,32:37:93.23:1000,93,0	1/1:1,16:17:39.10:419,39,0	1/1:0,18:18:54.11:570,54,0	1/1:4,29:33:69.17:742,69,0	1/1:0,11:11:27.07:290,27,0
chr10	7510998	.	CATCTATCT	C	657.37	PASS	AB=0.693;AC=10;AF=0.217;AN=46;BaseQRankSum=0.395;DP=537;FS=0.000;HRun=0;HaplotypeScore=162.7619;InbreedingCoeff=0.5968;MQ=65.38;MQ0=4;MQRankSum=-4.887;QD=5.92;ReadPosRankSum=-0.611;VQSLOD=2.0084;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:11.91:0,12,180	./.	./.	./.	0/0:34,0:34:24.08:0,24,872	1/1:14,14:28:2.88:73,3,0	./.	./.	1/1:10,6:16:3.01:73,3,0	0/0:13,0:24:41.94:0,42,383	0/0:25,0:25:27.09:0,27,985	0/0:20,0:23:15.04:0,15,378	0/0:13,0:28:27.09:0,27,883	0/0:11,0:21:24.08:0,24,707	0/0:15,0:15:12.03:0,12,384	0/0:15,0:15:15.05:0,15,525	0/0:12,3:15:0:0,0,0	0/0:26,0:26:17.08:0,17,1190	0/0:18,0:21:14.98:0,15,143	0/0:9,0:20:26.94:0,27,219	0/0:10,0:10:2.59:0,3,47	0/0:17,0:18:6.02:0,6,140	0/0:10,0:13:15.05:0,15,409	0/0:7,0:10:9.03:0,9,242	0/1:9,12:20:0:0,0,0	0/1:14,6:21:6.32:270,0,6	1/1:10,10:20:9.03:220,9,0	1/1:3,2:5:6.02:147,6,0
chr10	7511311	.	GCAAAA	G	16860.92	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-4.838;DP=561;FS=8.879;HRun=0;HaplotypeScore=121.7191;InbreedingCoeff=0.8845;MQ=70.23;MQ0=2;MQRankSum=-4.879;QD=35.50;ReadPosRankSum=3.762;VQSLOD=4.2401;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:57.15:0,57,1665	1/1:4,6:10:15.05:289,15,0	0/0:28,0:17:18.25:0,18,566	0/0:34,0:20:41.94:0,42,767	1/1:5,24:29:51.08:824,51,0	1/1:7,15:23:42.14:810,42,0	1/1:1,5:6:9.03:174,9,0	1/1:12,28:40:87.22:1426,87,0	1/1:2,9:11:24.08:463,24,0	1/1:3,15:18:45.12:783,45,0	1/1:3,18:21:50.83:776,51,0	1/1:2,8:10:18.06:347,18,0	1/1:2,15:17:45.15:868,45,0	1/1:1,27:28:60.20:1134,60,0	1/1:2,22:24:51.17:980,51,0	1/1:3,14:17:33.11:634,33,0	1/1:6,17:23:1.36:656,1,0	1/1:6,15:21:30.10:579,30,0	1/1:10,14:24:42.12:688,42,0	1/1:6,26:32:66.15:1183,66,0	1/1:2,11:13:27.09:476,27,0	1/1:2,10:12:20.02:297,20,0	1/1:3,12:15:27.09:521,27,0	1/1:1,10:11:24.08:438,24,0	1/1:5,23:28:48.63:905,49,0	1/1:2,12:14:36.11:627,36,0	1/1:2,19:21:39.13:752,39,0	1/1:0,7:7:12.04:231,12,0
chr10	7514228	.	A	AT	735.26	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-2.521;DP=593;FS=0.775;HRun=6;HaplotypeScore=53.6253;InbreedingCoeff=0.9568;MQ=77.22;MQ0=0;MQRankSum=-0.742;QD=25.35;ReadPosRankSum=-0.838;VQSLOD=3.1912;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,25:29:66.21:830,66,0	0/0:9,0:9:18.04:0,18,183	0/0:16,0:16:26.23:0,26,298	0/0:14,0:14:11.65:0,12,191	0/0:31,0:31:84.17:0,84,849	0/0:13,0:13:33.07:0,33,337	0/0:15,0:15:36.06:0,36,359	0/0:34,0:34:93.18:0,93,936	0/0:16,0:16:48.09:0,48,482	0/0:32,0:32:84.16:0,84,847	0/0:28,0:28:81.18:0,81,826	0/0:15,0:15:45.10:0,45,457	0/0:15,0:15:42.09:0,42,428	0/0:20,0:20:57.12:0,57,576	0/0:14,0:14:33.06:0,33,332	0/0:26,0:26:75.17:0,75,764	0/0:23,0:23:66.15:0,66,673	0/0:11,0:11:30.07:0,30,306	0/0:25,0:24:57.10:0,57,576	0/0:34,0:34:99:0,99,1003	0/0:11,0:11:33.08:0,33,337	0/0:14,0:14:39.07:0,39,391	0/0:25,0:25:66.13:0,66,667	0/0:16,0:16:45.10:0,45,459	0/0:29,0:29:84.16:0,84,839	0/0:27,0:27:72.15:0,72,734	0/0:38,0:38:99:0,111,1118	0/0:13,0:13:27.06:0,27,274
chr10	7514591	.	TA	T	426.59	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.890;DP=635;FS=1.908;HRun=8;HaplotypeScore=60.2496;InbreedingCoeff=0.9190;MQ=79.90;MQ0=0;MQRankSum=-3.322;QD=22.45;ReadPosRankSum=1.161;VQSLOD=4.2709;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,19:19:54.09:521,54,0	0/0:8,0:8:21.06:0,21,253	0/0:14,0:14:27.06:0,27,302	0/0:18,0:18:29.69:0,30,326	0/0:31,0:31:84.26:0,84,1015	0/0:22,0:22:63.19:0,63,761	0/0:20,0:20:57.04:0,57,667	0/0:26,0:26:66.20:0,66,787	0/0:21,0:21:54.13:0,54,637	0/0:30,0:30:87.27:0,87,1046	0/0:27,0:27:75.21:0,75,885	0/0:20,0:20:54.17:0,54,652	0/0:25,0:25:69.21:0,69,833	0/0:20,0:20:51.16:0,51,614	0/0:26,0:26:69.20:0,69,823	0/0:26,0:26:69.19:0,69,813	0/0:28,0:28:78.24:0,78,942	0/0:17,0:17:45.10:0,45,524	0/0:17,0:17:36.11:0,36,435	0/0:39,0:39:99:0,105,1258	0/0:12,0:12:30.09:0,30,362	0/0:25,0:25:69.21:0,69,832	0/0:19,0:19:57.17:0,57,689	0/0:12,0:12:33.10:0,33,399	0/0:27,0:27:69.21:0,69,834	0/0:36,0:36:99:0,99,1167	0/0:36,0:35:93.28:0,93,1122	0/0:13,1:14:7.32:0,7,370
chr10	7515675	.	C	CG	1477.97	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-7.835;DP=748;FS=0.644;HRun=1;HaplotypeScore=68.0410;InbreedingCoeff=0.9908;MQ=63.62;MQ0=0;MQRankSum=-0.466;QD=36.05;ReadPosRankSum=0.562;VQSLOD=3.8634;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,39:41:99:1573,105,0	0/0:13,0:13:36.07:0,36,446	0/0:12,0:13:30.08:0,30,375	0/0:9,0:8:18.06:0,18,233	0/0:18,0:18:48.11:0,48,604	0/0:18,0:18:54.18:0,54,701	0/0:27,0:27:78.25:0,78,1011	0/0:22,0:21:60.15:0,60,734	0/0:34,0:34:96.31:0,96,1246	0/0:27,0:27:75.24:0,75,966	0/0:15,0:15:42.14:0,42,544	0/0:27,0:27:81.26:0,81,1049	0/0:32,0:32:93.30:0,93,1205	0/0:27,0:27:78.24:0,78,997	0/0:40,0:40:99:0,117,1504	0/0:26,0:26:72.23:0,72,935	0/0:51,0:51:99:0,150,1946	0/0:32,0:32:90.29:0,90,1161	0/0:13,0:13:36.12:0,36,467	0/0:26,0:26:78.25:0,78,1012	0/0:45,0:45:99:0,129,1657	0/0:38,0:38:99:0,102,1323	0/0:28,0:28:75.23:0,75,959	0/0:31,0:31:93.30:0,93,1205	0/0:27,0:27:75.24:0,75,971	0/0:28,0:28:84.27:0,84,1084	0/0:29,0:29:81.25:0,81,1032	0/0:10,0:10:30.10:0,30,389
chr10	7515774	.	T	TG	20868.42	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-8.155;DP=712;FS=13.004;HRun=5;HaplotypeScore=69.4277;InbreedingCoeff=0.9836;MQ=69.36;MQ0=1;MQRankSum=-4.714;QD=31.57;ReadPosRankSum=6.119;VQSLOD=4.0553;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:13,24:37:84.23:1058,84,0	1/1:2,16:18:42.14:552,42,0	0/0:23,0:22:26.81:0,27,427	0/0:28,0:27:56.93:0,57,576	1/1:2,17:19:51.17:670,51,0	1/1:0,18:18:51.12:651,51,0	1/1:5,16:21:42.14:553,42,0	1/1:4,24:27:63.11:750,63,0	1/1:1,31:32:78.25:1026,78,0	1/1:1,24:25:69.21:891,69,0	1/1:1,14:15:33.11:434,33,0	1/1:3,29:32:75.24:987,75,0	1/1:1,28:29:75.24:985,75,0	1/1:4,13:17:39.13:513,39,0	1/1:1,35:36:96.31:1263,96,0	1/1:2,20:22:48.16:632,48,0	1/1:3,41:44:99:1460,111,0	1/1:3,17:20:48.16:631,48,0	1/1:1,18:19:54.17:706,54,0	1/1:3,24:27:57.19:750,57,0	1/1:4,34:38:90.29:1184,90,0	1/1:4,24:28:57.19:749,57,0	1/1:1,21:22:54.17:709,54,0	1/1:1,30:31:87.28:1145,87,0	1/1:4,21:25:51.17:668,51,0	1/1:2,23:25:66.18:833,66,0	1/1:2,27:29:69.22:908,69,0	1/1:0,4:4:12.04:158,12,0
chr10	7516943	.	AAC	A	67.26	PASS	AB=0.970;AC=13;AF=0.361;AN=36;BaseQRankSum=2.511;DP=416;FS=5.874;HRun=0;HaplotypeScore=58.6765;InbreedingCoeff=0.0173;MQ=73.09;MQ0=13;MQRankSum=-0.418;QD=0.45;ReadPosRankSum=2.060;VQSLOD=0.4647;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:26:7.26:7,0,16	./.	./.	./.	0/1:8,0:7:0:0,0,0	0/0:13,0:12:0:0,0,0	0/0:8,0:8:2.98:0,3,22	./.	0/1:14,0:15:2.63:3,0,28	1/1:14,0:14:2.84:14,3,0	./.	0/1:14,3:17:22.44:22,0,55	0/1:10,0:10:24.74:25,0,37	0/0:15,1:16:2.88:0,3,43	./.	1/1:10,0:10:2.84:14,3,0	1/1:14,1:14:8.38:71,8,0	0/0:15,0:15:8:0,8,41	./.	0/0:12,0:11:2.87:0,3,35	0/0:30,0:27:2.68:0,3,11	0/1:18,0:18:15.02:15,0,58	0/0:7,0:7:6.02:0,6,74	0/0:22,0:21:20.97:0,21,220	./.	./.	0/1:14,0:14:8.10:8,0,24	./.
chr10	7518123	.	C	CT	1249.91	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.864;DP=672;FS=3.027;HRun=3;HaplotypeScore=67.5783;InbreedingCoeff=0.9975;MQ=78.82;MQ0=0;MQRankSum=-4.778;QD=32.05;ReadPosRankSum=-2.052;VQSLOD=3.0516;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,33:39:99:1345,108,0	0/0:10,0:10:24.07:0,24,287	0/0:22,0:22:51.18:0,51,694	0/0:14,0:14:33.06:0,33,371	0/0:23,0:23:63.19:0,63,756	0/0:24,0:24:69.21:0,69,828	0/0:12,0:12:36.11:0,36,432	0/0:33,0:33:87.27:0,87,1043	0/0:23,0:23:66.19:0,66,781	0/0:28,0:27:72.22:0,72,864	0/0:15,0:15:42.13:0,42,504	0/0:23,0:23:66.16:0,66,792	0/0:31,0:31:78.24:0,78,936	0/0:28,0:28:81.25:0,81,969	0/0:26,0:26:78.24:0,78,935	0/0:20,0:20:60.17:0,60,708	0/0:26,0:26:69.21:0,69,827	0/0:16,0:16:45.14:0,45,538	0/0:33,0:33:90.27:0,90,1068	0/0:24,0:24:66.20:0,66,792	0/0:29,0:29:81.25:0,81,971	0/0:18,0:18:54.17:0,54,647	0/0:21,0:21:57.17:0,57,684	0/0:25,0:25:72.20:0,72,851	0/0:30,0:30:90.28:0,90,1079	0/0:27,0:27:78.24:0,78,936	0/0:33,0:32:99:0,99,1187	0/0:19,0:19:57.16:0,57,673
chr10	7518152	.	TG	T	1162.03	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=9.190;DP=629;FS=0.665;HRun=1;HaplotypeScore=64.8453;InbreedingCoeff=0.9996;MQ=86.05;MQ0=0;MQRankSum=-5.352;QD=33.20;ReadPosRankSum=-0.292;VQSLOD=3.1654;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,33:35:96.18:1257,96,0	0/0:14,0:14:42.14:0,42,666	0/0:23,0:23:59.37:0,59,929	0/0:21,0:21:60.10:0,60,876	0/0:23,0:23:69.22:0,69,1079	0/0:22,0:22:66.19:0,66,1003	0/0:15,0:15:45.15:0,45,715	0/0:37,0:37:99:0,111,1727	0/0:14,0:14:42.14:0,42,668	0/0:24,0:22:72.25:0,72,1151	0/0:15,0:15:45.11:0,45,651	0/0:28,0:28:84.26:0,84,1296	0/0:27,0:27:81.25:0,81,1266	0/0:25,0:25:75.23:0,75,1140	0/0:23,0:23:69.22:0,69,1074	0/0:23,0:23:69.22:0,69,1081	0/0:24,0:24:72.23:0,72,1118	0/0:17,0:17:51.17:0,51,815	0/0:30,0:30:87.27:0,87,1324	0/0:15,0:15:45.14:0,45,696	0/0:17,0:17:48.16:0,48,766	0/0:12,0:12:33.09:0,33,482	0/0:23,0:23:69.22:0,69,1073	0/0:23,0:23:69.13:0,69,1064	0/0:21,0:21:63.19:0,63,959	0/0:25,0:25:75.26:0,75,1196	0/0:38,0:38:99:0,114,1746	0/0:15,0:15:45.15:0,45,702
chr10	7518951	.	A	AAAAC	8497.98	PASS	AB=0.617;AC=21;AF=0.375;AN=56;BaseQRankSum=5.845;DP=788;FS=5.200;HRun=0;HaplotypeScore=143.6486;InbreedingCoeff=0.9120;MQ=53.29;MQ0=13;MQRankSum=-8.062;QD=26.47;ReadPosRankSum=-2.178;VQSLOD=3.7447;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:33,0:45:44.36:703,44,0	0/0:12,0:12:24.08:0,24,385	0/0:42,0:16:11.83:0,12,159	0/0:46,0:22:23.53:0,24,320	0/0:27,0:27:45.08:0,45,627	0/0:19,0:18:39.11:0,39,576	0/0:32,0:32:48.16:0,48,770	0/0:24,0:23:27.08:0,27,406	0/0:26,0:25:48.15:0,48,749	0/0:29,0:29:60.14:0,60,910	0/0:27,0:28:54.18:0,54,843	1/1:12,2:23:30.10:563,30,0	1/1:24,1:38:51.17:867,51,0	1/1:8,0:20:42.14:714,42,0	0/0:39,0:38:66.19:0,66,993	0/0:29,0:29:66.22:0,66,1045	0/0:30,0:30:66.20:0,66,1033	0/0:28,0:28:45.08:0,45,687	0/0:10,0:9:15.05:0,15,241	0/0:34,0:34:45.13:0,45,676	1/1:5,15:21:30.09:676,30,0	1/1:23,0:36:51.55:765,52,0	1/1:12,1:32:54.65:903,55,0	1/1:20,0:34:31.16:437,31,0	0/0:12,0:12:21.06:0,21,315	0/1:14,21:37:18.08:1504,0,18	1/1:7,18:27:45.15:1078,45,0	1/1:3,5:8:12.04:289,12,0
chr10	7519117	.	GGGA	G	16666.66	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-6.266;DP=710;FS=0.000;HRun=0;HaplotypeScore=116.9252;InbreedingCoeff=0.9858;MQ=64.59;MQ0=3;MQRankSum=-1.932;QD=28.11;ReadPosRankSum=5.738;VQSLOD=4.6168;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:42:77.07:0,77,1531	1/1:2,11:13:30.10:436,30,0	0/0:34,0:26:27.38:0,27,387	0/0:40,0:32:55.85:0,56,937	1/1:7,19:26:54.07:729,54,0	1/1:7,27:33:66.18:923,66,0	1/1:5,15:20:42.14:597,42,0	1/1:7,16:22:45.14:633,45,0	1/1:8,14:22:36.12:524,36,0	1/1:5,20:25:54.17:767,54,0	1/1:9,7:16:24.08:340,24,0	1/1:3,20:23:32.85:473,33,0	1/1:1,22:23:54.18:786,54,0	1/1:2,21:23:57.19:816,57,0	1/1:10,29:39:72.24:1040,72,0	1/1:4,20:24:54.18:786,54,0	1/1:3,25:27:63.21:917,63,0	1/1:4,13:17:30.07:414,30,0	1/1:5,12:17:36.08:483,36,0	1/1:3,22:25:60.17:843,60,0	1/1:9,30:39:72.24:1048,72,0	1/1:4,18:21:42.10:588,42,0	1/1:3,11:14:21.02:282,21,0	1/1:13,34:47:75.02:1091,75,0	1/1:2,14:16:39.13:561,39,0	1/1:9,23:32:69.22:985,69,0	1/1:5,12:17:30.10:433,30,0	1/1:2,5:7:12.04:175,12,0
chr10	7519160	.	A	AGAG	1256.59	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-4.494;DP=684;FS=0.778;HRun=0;HaplotypeScore=158.8961;InbreedingCoeff=0.8044;MQ=63.83;MQ0=1;MQRankSum=-1.581;QD=29.92;ReadPosRankSum=1.821;VQSLOD=4.1301;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,35:41:63.11:1351,63,0	0/0:10,0:10:24.08:0,24,345	0/0:41,0:27:44.86:0,45,601	0/0:42,0:31:42.17:0,42,680	0/0:19,0:19:39.12:0,39,539	0/0:24,0:24:51.16:0,51,724	0/0:24,0:24:63.20:0,63,898	0/0:28,0:29:36.11:0,36,507	0/0:18,0:18:42.14:0,42,611	0/0:22,0:22:33.11:0,33,480	0/0:8,0:8:3.01:0,3,44	0/0:26,0:26:54.12:0,54,768	0/0:28,0:28:69.17:0,69,960	0/0:22,0:22:57.18:0,57,804	0/0:32,0:32:78.26:0,78,1134	0/0:20,0:20:45.13:0,45,618	0/0:28,0:28:60.20:0,60,868	0/0:18,0:18:27.09:0,27,393	0/0:17,0:17:33.10:0,33,463	0/0:24,0:24:57.18:0,57,803	0/0:41,0:41:84.22:0,84,1176	0/0:18,0:18:45.14:0,45,636	0/0:16,0:16:36.12:0,36,524	0/0:43,0:42:90.25:0,90,1279	0/0:17,0:17:36.11:0,36,506	0/0:29,0:29:78.26:0,78,1135	0/0:18,0:18:36.12:0,36,524	0/0:7,0:7:8.72:0,9,169
chr10	7521147	.	A	AT	16734.13	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-10.946;DP=698;FS=25.867;HRun=9;HaplotypeScore=67.3666;InbreedingCoeff=0.9764;MQ=72.69;MQ0=0;MQRankSum=-5.546;QD=26.56;ReadPosRankSum=4.776;VQSLOD=3.4706;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,105,897	1/1:3,5:8:12.03:133,12,0	0/0:13,0:13:25.30:0,25,230	0/0:18,0:18:38.60:0,39,311	1/1:4,32:36:90.24:995,90,0	1/1:1,23:24:63.17:697,63,0	1/1:6,18:24:51.14:564,51,0	1/1:10,28:38:61.13:882,61,0	1/1:3,18:22:53.83:568,54,0	1/1:1,31:32:96.23:1051,96,0	1/1:3,23:26:69.18:755,69,0	1/1:6,31:37:72.19:797,72,0	1/1:8,26:34:66.18:730,66,0	1/1:0,25:25:72.19:796,72,0	1/1:1,30:31:78.21:863,78,0	1/1:3,14:17:42.11:465,42,0	1/1:0,14:14:42.11:465,42,0	1/1:3,18:21:45.12:498,45,0	1/1:5,17:22:50.49:531,50,0	1/1:6,33:39:69.26:954,69,0	1/1:4,9:13:21.06:232,21,0	1/1:4,20:25:66.01:704,66,0	1/1:2,30:32:64.20:935,64,0	1/1:2,24:26:63.17:697,63,0	1/1:0,27:27:75.20:830,75,0	1/1:3,27:31:87.06:936,87,0	1/1:4,17:22:44.18:525,44,0	1/1:0,4:4:12.03:133,12,0
chr10	7526637	.	T	TCACACACA	6854.24	PASS	AB=1.000;AC=49;AF=0.907;AN=54;BaseQRankSum=-0.168;DP=624;FS=0.000;HRun=0;HaplotypeScore=200.4525;InbreedingCoeff=0.4221;MQ=62.27;MQ0=21;MQRankSum=2.754;QD=13.23;ReadPosRankSum=0.541;VQSLOD=3.9253;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:22:6.02:131,6,0	./.	0/0:47,0:26:6.01:0,6,70	0/0:53,0:31:11.60:0,12,135	1/1:22,0:22:10.08:198,10,0	1/1:10,8:18:9.03:296,9,0	1/1:21,7:29:5.52:114,6,0	1/1:33,0:32:27.07:579,27,0	1/1:8,11:24:12.02:362,12,0	1/1:16,0:14:31.34:617,31,0	1/1:15,0:15:8.97:176,9,0	1/1:18,0:16:8.70:235,9,0	1/1:16,0:16:21.07:482,21,0	1/1:15,0:14:8.95:186,9,0	1/1:19,0:17:5.70:128,6,0	1/1:25,0:25:12.51:260,13,0	1/1:14,1:17:8.20:178,8,0	1/1:16,0:15:7.41:118,7,0	1/1:17,0:15:11.25:193,11,0	1/1:14,0:27:5.19:111,5,0	1/1:33,0:31:12.01:187,12,0	1/1:29,0:28:15.05:288,15,0	1/1:11,0:11:5.69:87,6,0	1/1:25,0:23:6.91:87,7,0	1/1:9,13:23:0.47:1,0,0	1/1:16,0:16:33.58:803,34,0	1/1:19,0:18:33.07:835,33,0	0/1:8,0:8:54.12:203,0,54
chr10	7526707	.	ATC	A	8174.50	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=13.172;DP=662;FS=0.670;HRun=0;HaplotypeScore=135.5999;InbreedingCoeff=0.9727;MQ=61.18;MQ0=1;MQRankSum=1.155;QD=28.99;ReadPosRankSum=5.491;VQSLOD=6.1847;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:6,0:6:0.13:0,0,0	1/1:0,8:8:24.04:293,24,0	0/0:33,0:25:55.20:0,55,920	0/0:44,0:35:69.83:0,70,1092	1/1:1,15:16:35.88:468,36,0	0/0:16,0:16:39.13:0,39,663	0/0:32,0:32:81.28:0,81,1334	1/1:7,19:24:54.17:700,54,0	0/0:26,0:26:59.93:0,60,1018	1/1:4,21:25:63.18:802,63,0	1/1:0,14:14:42.09:527,42,0	1/1:2,19:21:45.15:585,45,0	1/1:0,28:28:78.25:1014,78,0	1/1:2,16:18:36.12:468,36,0	1/1:4,24:28:66.21:858,66,0	1/1:2,27:29:69.22:898,69,0	0/0:14,0:13:39.13:0,39,649	1/1:1,14:15:39.13:507,39,0	0/0:21,0:20:45.14:0,45,726	0/0:19,0:19:45.03:0,45,744	0/0:78,0:77:99:0,183,2996	1/1:2,15:17:36.12:468,36,0	1/1:3,13:16:30.10:390,30,0	1/1:1,14:15:15.05:195,15,0	0/0:28,0:28:78.14:0,78,1310	0/0:26,0:26:75.24:0,75,1216	0/0:23,0:22:51.17:0,51,842	0/0:19,0:19:57.18:0,57,922
chr10	7526778	.	CATCTCTCTCT	C	5103.06	PASS	AB=0.975;AC=29;AF=0.518;AN=56;BaseQRankSum=8.182;DP=565;FS=25.736;HRun=0;HaplotypeScore=177.5841;InbreedingCoeff=0.7397;MQ=52.03;MQ0=21;MQRankSum=2.717;QD=17.30;ReadPosRankSum=2.367;VQSLOD=2.5848;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:10:3.90:0,4,21	1/1:5,0:5:15:137,15,0	0/0:20,0:5:12.01:0,12,118	0/0:34,0:21:49.81:0,50,499	1/1:22,1:23:32.12:535,32,0	0/0:8,0:8:21.01:0,21,290	0/0:19,0:18:23.87:0,24,232	1/1:23,0:23:31.64:453,32,0	0/0:16,0:15:34.11:0,34,279	1/1:18,0:16:44.50:383,44,0	1/1:13,1:17:21.62:259,22,0	1/1:12,2:15:35.05:397,35,0	1/1:18,0:20:50.47:601,50,0	1/1:9,3:12:10.64:92,11,0	1/1:20,0:20:46.74:391,47,0	1/1:21,1:22:53.90:448,54,0	0/1:16,0:15:10.57:11,0,241	1/1:19,0:16:6.52:289,7,0	0/0:19,0:19:22.90:0,23,520	0/1:20,0:20:19.44:19,0,378	0/0:53,0:51:69.55:0,70,743	1/1:18,2:20:37.65:575,38,0	1/1:10,0:13:11.49:185,11,0	0/1:23,1:22:90.68:329,0,91	0/0:28,0:28:51.71:0,52,775	0/0:19,0:19:50.54:0,51,1440	0/0:15,0:14:41.90:0,42,1173	0/0:28,0:27:78.37:0,78,1232
chr10	7526779	.	ATC	A	1740.74	PASS	AB=0.886;AC=40;AF=0.769;AN=52;BaseQRankSum=4.470;DP=558;FS=0.000;HRun=0;HaplotypeScore=128.0687;InbreedingCoeff=0.3654;MQ=51.99;MQ0=22;MQRankSum=0.847;QD=3.74;ReadPosRankSum=2.413;VQSLOD=2.5297;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:2,0:10:0:0,0,0	1/1:5,0:5:5.97:45,6,0	./.	0/1:34,0:21:0:0,0,0	1/1:24,0:23:23.70:177,24,0	1/1:8,0:8:5.95:42,6,0	./.	1/1:23,0:23:0.47:1,0,0	1/1:16,0:15:5.51:45,6,0	1/1:19,0:16:17.94:142,18,0	1/1:17,0:17:23.40:154,23,0	1/1:16,0:14:6.12:48,6,0	1/1:21,0:20:14.87:111,15,0	0/0:13,0:12:0:0,0,1	1/1:20,0:19:17.93:136,18,0	1/1:22,0:22:14.68:96,15,0	0/1:16,0:15:9.23:9,0,15	1/1:17,0:14:14.92:111,15,0	1/1:13,0:17:11.74:73,12,0	1/1:19,0:20:26.81:197,27,0	0/1:37,16:51:8.41:10,0,8	1/1:21,0:20:12.11:96,12,0	1/1:13,0:13:5.96:43,6,0	0/1:25,0:22:4.01:81,0,4	1/1:27,0:27:29.70:210,30,0	0/1:20,0:20:48.58:49,0,99	0/0:17,0:16:18.85:0,19,147	0/0:28,0:27:8.80:0,9,59
chr10	7526814	.	TCTCTCACACA	T	4331.06	PASS	AB=0.940;AC=39;AF=0.722;AN=54;BaseQRankSum=2.762;DP=456;FS=0.915;HRun=0;HaplotypeScore=119.4127;InbreedingCoeff=0.1679;MQ=41.86;MQ0=48;MQRankSum=2.716;QD=10.64;ReadPosRankSum=1.482;VQSLOD=3.1789;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:21,0:17:0.18:0,0,0	1/1:4,0:4:9.02:119,9,0	./.	0/0:3,0:1:1.25:0,1,3	1/1:15,0:14:25.26:241,25,0	1/1:9,0:9:5.83:89,6,0	0/0:21,0:18:0.94:0,1,2	0/0:12,0:11:0:0,0,0	1/1:10,0:9:10.40:182,10,0	1/1:17,0:14:20.98:234,21,0	1/1:19,0:17:26.73:308,27,0	1/1:13,0:9:7.93:114,8,0	1/1:13,0:12:23.08:249,23,0	1/1:15,0:14:4.04:48,4,0	1/1:22,0:20:33.03:454,33,0	1/1:16,0:15:24.05:320,24,0	0/1:7,19:23:35.06:94,0,35	1/1:26,0:22:19.47:401,19,0	0/1:12,0:11:26.89:137,0,27	1/1:18,0:17:30.04:351,30,0	0/1:39,0:34:42.70:50,0,43	1/1:13,0:12:14.35:162,14,0	1/1:14,0:13:6.01:57,6,0	0/1:34,0:26:14.83:239,0,15	1/1:18,0:17:30.09:440,30,0	0/1:17,0:16:23.70:24,0,255	0/0:12,0:11:18.22:0,18,296	0/1:16,0:10:17.99:18,0,197
chr10	7526818	.	TCACACACA	T	1483.90	PASS	AB=0.992;AC=27;AF=0.563;AN=48;BaseQRankSum=-1.399;DP=495;FS=13.681;HRun=0;HaplotypeScore=131.3182;InbreedingCoeff=0.1364;MQ=40.34;MQ0=48;MQRankSum=3.518;QD=4.64;ReadPosRankSum=0.753;VQSLOD=1.9771;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:25:0.92:0,1,1	1/1:5,0:6:3.01:35,3,0	./.	./.	0/0:14,0:13:2.68:0,3,11	0/1:9,0:9:0:0,0,0	1/1:22,1:20:2.52:42,3,0	0/0:15,0:13:3.01:0,3,61	1/1:11,0:10:7.68:171,8,0	0/1:21,0:18:22.83:25,0,23	0/1:20,0:18:0.82:30,0,1	1/1:13,0:9:3.01:65,3,0	1/1:10,2:11:6.02:140,6,0	0/1:15,1:15:12.02:37,0,12	1/1:21,0:21:15:293,15,0	1/1:17,0:16:12.03:198,12,0	0/1:30,0:27:13.31:44,0,13	0/1:29,0:25:35.30:183,0,35	0/0:12,0:11:7.77:0,8,83	0/0:19,0:19:2.36:0,2,13	0/0:39,0:34:2.46:0,2,16	1/1:15,0:14:2.59:73,3,0	./.	1/1:42,0:33:8.10:219,8,0	0/1:19,0:18:6.99:7,0,14	0/0:17,0:16:2.44:0,2,5	./.	1/1:12,0:8:3.01:56,3,0
chr10	7529817	.	TG	T	10537.15	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=15.683;DP=660;FS=3.331;HRun=2;HaplotypeScore=64.1878;InbreedingCoeff=0.9999;MQ=90.98;MQ0=0;MQRankSum=-3.699;QD=36.46;ReadPosRankSum=2.850;VQSLOD=5.5823;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:90.30:0,90,1349	1/1:0,13:13:36.10:467,36,0	0/0:35,0:34:96.33:0,96,1441	0/0:20,0:20:50.29:0,50,694	1/1:0,18:18:51.17:661,51,0	0/0:21,0:21:63.21:0,63,944	0/0:36,0:36:99:0,108,1600	1/1:2,20:22:60.18:762,60,0	0/0:22,0:22:63.21:0,63,944	1/1:0,26:26:78.25:1013,78,0	1/1:0,22:22:63.20:818,63,0	1/1:0,19:19:54.18:701,54,0	1/1:1,12:13:33.11:429,33,0	1/1:0,21:21:60.19:778,60,0	1/1:0,19:19:54.18:701,54,0	1/1:1,25:26:66.21:857,66,0	0/0:24,0:24:72.22:0,72,1041	1/1:0,24:24:69.22:896,69,0	0/0:26,0:26:75.25:0,75,1123	0/0:31,0:31:93.32:0,93,1394	0/0:33,0:33:96.31:0,96,1418	1/1:0,14:14:42.14:545,42,0	1/1:0,23:23:69.22:895,69,0	1/1:0,29:29:78.25:1013,78,0	0/0:27,0:27:81.26:0,81,1192	0/0:28,0:28:84.27:0,84,1239	0/0:26,0:26:78.25:0,78,1146	0/0:12,0:12:36.12:0,36,539
chr10	7529960	.	G	GA	4808.05	PASS	AB=0.778;AC=28;AF=0.500;AN=56;BaseQRankSum=-3.154;DP=476;FS=18.207;HRun=9;HaplotypeScore=56.6895;InbreedingCoeff=0.8631;MQ=68.29;MQ0=6;MQRankSum=0.862;QD=20.37;ReadPosRankSum=0.942;VQSLOD=3.6239;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,1:32:57.69:0,58,720	1/1:4,6:10:15.04:166,15,0	0/0:18,0:13:27.12:0,27,296	0/0:12,0:10:24.61:0,25,179	1/1:4,12:17:28.98:338,29,0	0/0:17,0:18:47.02:0,47,397	0/0:22,0:22:62.96:0,63,541	1/1:6,15:22:50.72:486,51,0	0/0:17,0:17:38.97:0,39,338	0/1:3,4:8:8.01:147,0,8	1/1:2,5:8:8.04:113,8,0	1/1:6,10:16:30.08:329,30,0	1/1:0,15:15:36.10:398,36,0	1/1:1,16:17:45.12:496,45,0	1/1:2,8:10:18.05:199,18,0	1/1:2,10:12:27.07:299,27,0	0/0:28,1:29:38.77:0,39,566	1/1:4,23:27:54.15:597,54,0	0/1:15,1:15:0.24:0,0,222	0/0:23,0:23:56.84:0,57,479	0/0:18,0:18:50.99:0,51,443	1/1:2,11:13:24.06:266,24,0	1/1:1,15:15:21.53:233,22,0	1/1:1,24:28:71.73:740,72,0	0/0:9,0:9:23.95:0,24,203	0/0:16,0:16:44.99:0,45,391	0/0:23,0:22:59.96:0,60,516	0/0:2,0:2:3:0,3,26
chr10	7531683	.	CT	C	12430.57	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=16.824;DP=696;FS=1.947;HRun=3;HaplotypeScore=76.7009;InbreedingCoeff=0.9942;MQ=86.11;MQ0=0;MQRankSum=-3.088;QD=34.06;ReadPosRankSum=2.619;VQSLOD=5.5439;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,99,1425	1/1:0,13:13:39.12:484,39,0	0/0:20,0:20:32.90:0,33,602	0/0:27,0:27:72.19:0,72,996	1/1:0,36:36:99:1263,102,0	0/0:17,0:17:51.16:0,51,715	0/0:15,0:15:45.12:0,45,625	1/1:3,31:34:93.29:1152,93,0	0/0:33,0:33:96.29:0,96,1344	1/1:0,33:33:99:1211,99,0	1/1:0,21:21:57.18:707,57,0	1/1:1,25:26:75.24:930,75,0	1/1:0,26:26:78.25:966,78,0	1/1:1,25:26:66.21:818,66,0	1/1:0,23:23:66.21:818,66,0	1/1:2,22:24:16.98:664,17,0	0/0:25,0:25:72.24:0,72,1037	1/1:0,14:14:36.11:444,36,0	0/0:22,0:22:65.43:0,65,914	0/0:24,0:24:72.23:0,72,1018	0/0:30,0:30:90.30:0,90,1295	1/1:0,35:35:99:1227,99,0	1/1:0,28:28:75.24:929,75,0	1/1:2,24:26:66.21:818,66,0	0/0:21,0:21:63.21:0,63,907	0/0:24,1:25:29.02:0,29,870	0/0:32,0:32:96.32:0,96,1379	0/0:4,0:4:12.02:0,12,153
chr10	7531880	.	GT	G	10489.43	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=15.625;DP=660;FS=6.411;HRun=4;HaplotypeScore=91.5904;InbreedingCoeff=0.9856;MQ=84.94;MQ0=0;MQRankSum=-12.630;QD=33.41;ReadPosRankSum=0.439;VQSLOD=5.0284;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,123,1648	1/1:1,8:9:24.07:285,24,0	0/0:29,0:29:84.26:0,84,1108	0/0:22,0:22:56.52:0,57,632	1/1:3,35:38:96.27:1120,96,0	0/0:17,0:17:45.14:0,45,609	0/0:21,0:21:57.18:0,57,773	1/1:7,12:19:54.14:618,54,0	0/0:27,0:27:78.25:0,78,1075	1/1:3,30:33:93.27:1104,93,0	1/1:3,19:22:63.19:748,63,0	1/1:3,23:26:78.22:918,78,0	1/1:2,15:17:51.16:610,51,0	1/1:2,19:21:63.19:752,63,0	1/1:0,30:30:90.28:1079,90,0	1/1:0,15:15:45.14:537,45,0	0/0:24,0:24:69.19:0,69,930	1/1:0,22:22:66.20:788,66,0	0/0:22,0:22:63.20:0,63,863	0/0:35,0:35:93.30:0,93,1277	0/0:25,0:25:75.25:0,75,1050	1/1:4,20:24:60.16:701,60,0	1/1:4,18:22:63.19:750,63,0	1/1:0,16:16:42.04:479,42,0	0/0:26,0:25:72.23:0,72,989	0/0:13,1:14:6.19:0,6,510	0/0:33,0:33:96.28:0,96,1320	0/0:8,0:8:24.08:0,24,336
chr10	7531925	.	T	TG	12888.82	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=2.679;DP=731;FS=5.020;HRun=4;HaplotypeScore=91.3483;InbreedingCoeff=0.9906;MQ=83.52;MQ0=0;MQRankSum=-7.784;QD=36.41;ReadPosRankSum=0.544;VQSLOD=4.7403;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,129,1462	1/1:2,6:8:18.06:245,18,0	0/0:32,0:32:63.18:0,63,775	0/0:18,0:17:18.59:0,19,307	1/1:4,40:44:99:1620,123,0	0/0:28,0:28:81.20:0,81,898	0/0:18,0:18:51.15:0,51,578	1/1:1,24:25:72.20:936,72,0	0/0:24,0:24:69.18:0,69,773	1/1:4,29:33:93.29:1237,93,0	1/1:2,33:35:99:1351,102,0	1/1:2,26:28:81.26:1080,81,0	1/1:4,19:23:60.20:816,60,0	1/1:1,21:22:57.19:777,57,0	1/1:2,23:25:63.21:859,63,0	1/1:1,18:19:54.18:736,54,0	0/0:34,0:34:99:0,99,1101	1/1:5,15:20:54.11:690,54,0	0/0:22,0:22:54.13:0,54,600	0/0:35,0:35:99:0,99,1094	0/0:29,0:29:81.23:0,81,918	1/1:2,25:27:69.14:898,69,0	1/1:2,17:19:54.18:724,54,0	1/1:5,21:26:69.17:920,69,0	0/0:27,0:27:78.20:0,78,866	0/0:17,1:18:10.18:0,10,479	0/0:40,0:40:99:0,117,1317	0/0:6,0:6:18.05:0,18,204
chr10	7532113	.	G	GA	9642.21	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-14.115;DP=681;FS=11.669;HRun=7;HaplotypeScore=65.6455;InbreedingCoeff=0.9998;MQ=73.48;MQ0=3;MQRankSum=-2.107;QD=30.81;ReadPosRankSum=1.604;VQSLOD=4.4786;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,135,1292	1/1:2,12:14:36.05:405,36,0	0/0:28,0:26:69.10:0,69,661	0/0:29,0:26:65.35:0,65,587	1/1:2,30:32:87.22:1031,87,0	0/0:30,0:30:78.07:0,78,743	0/0:24,0:24:72.10:0,72,688	1/1:2,32:34:96.24:1121,96,0	0/0:34,0:34:93.08:0,93,874	1/1:2,25:27:75.21:894,75,0	1/1:2,11:13:33.10:399,33,0	1/1:3,16:19:45.14:544,45,0	1/1:0,19:19:54.17:651,54,0	1/1:4,18:22:44.93:543,45,0	1/1:1,22:23:63.19:761,63,0	1/1:7,17:24:42.13:507,42,0	0/0:22,0:21:63.10:0,63,608	1/1:2,14:16:44.45:519,44,0	0/0:15,0:15:42.07:0,42,405	0/0:26,0:26:60.07:0,60,574	0/0:25,0:24:69.11:0,69,666	1/1:1,16:17:48.11:564,48,0	1/1:2,16:18:48.15:580,48,0	1/1:2,33:35:93.29:1124,93,0	0/0:17,0:17:42.04:0,42,398	0/0:26,0:26:69.08:0,69,656	0/0:26,0:26:72.11:0,72,695	0/0:14,0:14:27.04:0,27,261
chr10	7532849	.	CA	C	9668.88	PASS	AB=0.520;AC=27;AF=0.482;AN=56;BaseQRankSum=17.567;DP=619;FS=0.626;HRun=5;HaplotypeScore=94.4171;InbreedingCoeff=0.9437;MQ=82.38;MQ0=0;MQRankSum=-3.188;QD=31.19;ReadPosRankSum=1.645;VQSLOD=5.0914;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:81.26:0,81,1089	1/1:0,8:8:21.06:238,21,0	0/0:24,0:24:69.23:0,69,943	0/0:26,1:27:68.96:0,69,902	1/1:2,28:30:84.24:953,84,0	0/0:27,0:27:81.25:0,81,1085	0/0:19,0:19:54.17:0,54,723	1/1:4,34:38:99:1142,102,0	0/0:10,0:10:27.09:0,27,369	1/1:1,22:23:66.17:737,66,0	1/1:1,17:18:54.15:612,54,0	1/1:0,15:15:39.11:442,39,0	1/1:0,23:23:63.05:713,63,0	1/1:1,25:26:69.20:782,69,0	1/1:1,22:23:60.17:681,60,0	0/1:1,12:13:4.95:338,0,5	0/0:23,1:24:35.18:0,35,850	1/1:0,8:8:24.07:272,24,0	0/0:23,0:23:69.20:0,69,912	0/0:28,0:28:72.24:0,72,979	0/0:25,0:25:72.24:0,72,985	1/1:0,27:27:78.22:885,78,0	1/1:0,25:25:75.21:851,75,0	1/1:2,31:33:90.26:1021,90,0	0/0:28,0:28:75.23:0,75,994	0/0:22,0:22:60.20:0,60,819	0/0:16,0:16:45.15:0,45,615	0/0:8,0:8:18.06:0,18,246
chr10	7533010	.	ACTTGG	A	15999.16	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=14.120;DP=564;FS=0.653;HRun=0;HaplotypeScore=116.3507;InbreedingCoeff=0.9952;MQ=82.39;MQ0=0;MQRankSum=-7.144;QD=63.24;ReadPosRankSum=3.079;VQSLOD=5.5834;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:93.32:0,93,3023	1/1:0,9:9:24.08:559,24,0	0/0:24,0:24:69.24:0,69,2065	0/0:16,0:16:42.14:0,42,1242	1/1:0,27:27:81.28:1837,81,0	0/0:24,0:24:72.25:0,72,2399	0/0:15,0:15:45.15:0,45,1396	1/1:0,23:23:60.21:1352,60,0	0/0:17,0:17:51.17:0,51,1645	1/1:3,14:18:48.16:1112,48,0	1/1:0,22:22:63.22:1467,63,0	1/1:0,18:18:48.16:1118,48,0	1/1:0,18:18:54.19:1257,54,0	1/1:0,17:17:45.15:1048,45,0	1/1:0,14:14:33.11:769,33,0	1/1:0,11:11:24.08:559,24,0	0/0:20,0:20:60.21:0,60,1961	1/1:0,4:4:12.04:280,12,0	0/0:23,0:23:69.24:0,69,2273	0/0:34,0:34:99:0,102,3220	0/0:15,0:15:45.15:0,45,1499	1/1:0,23:23:66.23:1537,66,0	1/1:0,26:27:78.27:1777,78,0	1/1:0,22:22:57.20:1326,57,0	0/0:34,0:34:99:0,102,3228	0/0:19,0:19:57.20:0,57,1894	0/0:25,0:25:75.26:0,75,2404	0/0:13,0:13:39.13:0,39,1295
chr10	7533678	.	AG	A	11665.11	PASS	AB=0.517;AC=27;AF=0.482;AN=56;BaseQRankSum=19.502;DP=658;FS=0.287;HRun=1;HaplotypeScore=99.4931;InbreedingCoeff=0.9309;MQ=76.58;MQ0=0;MQRankSum=-0.163;QD=35.46;ReadPosRankSum=1.747;VQSLOD=4.8114;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:78.23:0,78,1186	1/1:0,14:14:30.01:393,30,0	0/0:13,0:13:29.23:0,29,439	0/0:15,0:15:37.74:0,38,479	1/1:0,24:24:72:927,72,0	0/0:33,0:33:99:0,99,1545	0/0:18,0:18:54.14:0,54,789	1/1:0,37:39:99:1467,117,0	0/0:26,0:26:78.22:0,78,1166	1/1:1,25:26:78.14:981,78,0	1/1:0,37:38:99:1471,111,0	1/1:0,20:20:45.15:626,45,0	1/1:0,25:25:63.21:876,63,0	1/1:0,24:24:54.18:750,54,0	1/1:0,28:28:78.26:1086,78,0	0/1:1,14:15:11.49:423,0,11	0/0:34,0:34:99:0,102,1497	1/1:0,16:16:45.15:619,45,0	0/0:13,0:13:39.13:0,39,619	0/0:43,0:43:99:0,129,1936	0/0:19,0:19:57.16:0,57,856	1/1:0,16:16:45.11:603,45,0	1/1:0,30:30:66.17:902,66,0	1/1:0,14:14:39.13:542,39,0	0/0:30,0:29:90.23:0,90,1304	0/0:22,0:22:66.21:0,66,1000	0/0:31,0:31:93.23:0,93,1353	0/0:5,0:5:15.03:0,15,213
chr10	7533952	.	G	GT	6432.08	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-14.179;DP=491;FS=2.678;HRun=8;HaplotypeScore=45.3501;InbreedingCoeff=0.9933;MQ=76.83;MQ0=0;MQRankSum=0.504;QD=26.58;ReadPosRankSum=0.545;VQSLOD=5.4002;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,15:19:42.12:485,42,0	1/1:1,11:12:24.07:277,24,0	0/0:10,1:11:17.84:0,18,152	0/0:13,0:12:20.93:0,21,177	1/1:9,15:24:42.12:485,42,0	0/0:22,0:22:51.01:0,51,467	0/0:19,0:19:47.99:0,48,433	1/1:5,19:25:54.16:623,54,0	0/0:25,0:25:63.03:0,63,577	1/1:2,19:21:60.18:687,60,0	1/1:2,23:25:69.20:794,69,0	1/1:1,7:8:21.06:242,21,0	1/1:3,12:15:27.08:312,27,0	1/1:0,12:12:33.10:381,33,0	1/1:0,12:12:36.11:416,36,0	1/1:2,14:16:36.11:416,36,0	0/0:19,0:19:48.02:0,48,438	1/1:4,10:14:30.09:346,30,0	0/0:18,0:18:39.01:0,39,357	0/0:28,0:28:81.04:0,81,741	0/0:14,0:14:39.02:0,39,357	1/1:2,6:8:15.04:173,15,0	1/1:1,13:14:32.97:381,33,0	1/1:1,16:17:36.11:415,36,0	0/0:16,0:16:39.01:0,39,357	0/0:20,1:21:16.40:0,16,405	0/0:28,0:28:74.96:0,75,672	0/0:15,0:15:39.01:0,39,357
chr10	7535208	.	CT	C	5540.77	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=10.945;DP=460;FS=5.597;HRun=1;HaplotypeScore=89.3867;InbreedingCoeff=0.9650;MQ=59.60;MQ0=1;MQRankSum=-11.066;QD=30.95;ReadPosRankSum=-1.156;VQSLOD=4.0424;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,114,1640	1/1:0,4:4:2.80:41,3,0	0/0:16,0:16:45.12:0,45,617	0/0:21,0:19:47.88:0,48,718	1/1:3,13:16:33.08:424,33,0	0/0:14,0:14:39.12:0,39,564	0/0:21,0:21:60.19:0,60,873	1/1:3,17:18:51.11:655,51,0	0/0:20,0:20:57.17:0,57,829	1/1:1,8:9:24.08:326,24,0	1/1:2,10:12:27.09:374,27,0	1/1:1,15:16:45.15:625,45,0	1/1:2,8:10:30.06:394,30,0	1/1:3,13:16:42.09:544,42,0	1/1:0,10:10:27.04:352,27,0	1/1:0,10:10:27.09:375,27,0	0/0:27,0:27:78.23:0,78,1122	1/1:1,15:16:45.05:565,45,0	0/0:18,0:18:46.13:0,46,722	0/0:12,0:12:36.12:0,36,539	0/0:33,0:33:99:0,99,1348	1/1:1,9:10:17.78:224,18,0	1/1:1,10:11:24.03:310,24,0	1/1:1,18:19:27.36:333,27,0	0/0:26,0:26:51.58:0,52,1029	0/0:16,0:16:45.14:0,45,642	0/0:15,0:15:45.12:0,45,628	0/0:3,0:3:9.03:0,9,130
chr10	7535215	.	TC	T	4900.13	PASS	AC=28;AF=0.519;AN=54;BaseQRankSum=12.327;DP=457;FS=5.828;HRun=6;HaplotypeScore=90.4623;InbreedingCoeff=0.9814;MQ=59.58;MQ0=1;MQRankSum=-9.897;QD=22.38;ReadPosRankSum=0.550;VQSLOD=3.7497;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,43:44:99:1225,114,0	./.	0/0:15,0:15:39.12:0,39,501	0/0:26,0:23:66.13:0,66,821	1/1:2,13:15:27.05:282,27,0	0/0:13,0:13:36.10:0,36,457	0/0:22,0:22:60.19:0,60,788	1/1:5,16:19:42.09:443,42,0	0/0:16,0:16:45.13:0,45,576	1/1:2,7:9:21.05:226,21,0	1/1:3,8:11:15.04:161,15,0	1/1:1,14:15:42.10:451,42,0	1/1:1,10:11:27.07:289,27,0	1/1:1,15:16:33.08:354,33,0	1/1:2,9:11:24.06:257,24,0	1/1:2,7:9:21.05:225,21,0	0/0:24,0:24:66.21:0,66,868	1/1:2,14:16:39.10:419,39,0	0/0:15,0:15:37.98:0,38,511	0/0:12,0:12:24.07:0,24,302	0/0:34,0:34:90.26:0,90,1152	1/1:1,9:10:11.80:129,12,0	1/1:2,9:11:24.03:245,24,0	1/1:5,15:20:18.40:194,18,0	0/0:25,0:25:75.24:0,75,986	0/0:17,0:17:45.12:0,45,554	0/0:15,0:15:39.11:0,39,495	0/0:3,0:3:9.03:0,9,118
chr10	7536417	.	TTA	T	720.21	PASS	AB=1.000;AC=6;AF=0.107;AN=56;BaseQRankSum=0.896;DP=529;FS=4.000;HRun=0;HaplotypeScore=133.4230;InbreedingCoeff=0.2305;MQ=71.66;MQ0=2;MQRankSum=-1.754;QD=8.57;ReadPosRankSum=-1.463;VQSLOD=3.0737;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,27:27:60.01:788,60,0	0/0:5,0:5:10.13:0,10,56	0/0:29,0:16:7.02:0,7,256	0/0:29,0:18:49.52:0,50,591	0/0:21,0:20:24.40:0,24,178	0/0:15,0:15:19.97:0,20,273	0/1:9,0:9:26.59:27,0,83	0/0:15,0:10:11.92:0,12,84	0/0:15,0:15:42.63:0,43,305	0/0:24,0:22:38.36:0,38,230	0/0:28,0:28:42.72:0,43,288	0/1:9,0:9:5:5,0,59	0/0:17,0:17:33.50:0,33,171	0/0:15,0:15:16.84:0,17,102	0/0:14,0:13:19.11:0,19,103	0/0:13,0:13:8.24:0,8,170	0/0:18,0:18:10.27:0,10,320	0/0:12,0:12:25.03:0,25,156	0/1:19,0:19:17.37:17,0,236	0/0:29,0:29:55.15:0,55,507	0/0:8,0:8:21.73:0,22,150	0/0:14,0:14:6.41:0,6,109	0/0:24,0:23:17.01:0,17,177	0/0:8,0:8:7.21:0,7,48	0/0:30,0:30:63.07:0,63,584	0/1:20,0:20:2.02:2,0,259	0/0:46,0:46:47.13:0,47,775	0/0:16,0:16:44.43:0,44,311
chr10	7536418	.	TAAAAAAA	T	5748.59	PASS	AB=0.955;AC=29;AF=0.518;AN=56;BaseQRankSum=2.302;DP=444;FS=6.282;HRun=10;HaplotypeScore=148.2567;InbreedingCoeff=0.8830;MQ=76.93;MQ0=2;MQRankSum=-12.740;QD=36.85;ReadPosRankSum=-0.326;VQSLOD=1.8394;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:60.68:0,61,1426	1/1:1,1:3:9.03:146,9,0	0/0:28,0:16:41.56:0,42,892	0/0:28,0:18:29.33:0,29,1149	1/1:2,6:10:21.07:476,21,0	0/0:15,0:15:45.15:0,45,1308	0/0:9,0:9:18.06:0,18,533	1/1:1,8:8:18.04:299,18,0	0/0:15,0:15:42.13:0,42,1255	1/1:5,9:15:30.10:702,30,0	1/1:3,5:13:27.09:521,27,0	1/1:0,3:6:18.06:353,18,0	1/1:1,7:11:21.07:425,21,0	1/1:2,7:14:39.12:750,39,0	1/1:0,6:9:21.07:400,21,0	1/1:4,1:7:18.05:256,18,0	0/0:18,0:18:51.15:0,51,1472	1/1:1,0:5:6.02:96,6,0	0/0:19,0:19:51.15:0,51,1424	0/0:28,0:28:67.52:0,68,1775	0/0:7,0:7:21.02:0,21,590	1/1:0,1:8:24.08:389,24,0	1/1:3,8:17:48.15:855,48,0	1/1:0,4:4:3.01:71,3,0	0/0:30,0:30:78.25:0,78,2404	0/1:20,1:21:9.20:9,0,1663	0/0:47,0:47:99:0,132,4100	0/0:15,0:16:48.16:0,48,1491
chr10	7536635	.	A	ATTG	13906.38	PASS	AB=0.935;AC=29;AF=0.518;AN=56;BaseQRankSum=-14.180;DP=630;FS=0.660;HRun=0;HaplotypeScore=77.3014;InbreedingCoeff=0.9174;MQ=54.16;MQ0=4;MQRankSum=-2.225;QD=43.73;ReadPosRankSum=2.709;VQSLOD=6.2700;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:23.84:0,24,918	1/1:2,6:8:21.07:458,21,0	0/0:34,0:23:60.21:0,60,959	0/0:29,0:26:69.17:0,69,1036	1/1:4,26:33:78.20:1654,78,0	0/0:27,0:27:75.10:0,75,1178	0/0:18,0:18:51.17:0,51,819	1/1:11,19:14:21.05:382,21,0	0/0:27,0:27:66.22:0,66,1055	1/1:2,12:16:39.11:808,39,0	1/1:2,11:13:33.03:679,33,0	1/1:2,14:16:30.10:638,30,0	1/1:2,22:24:63.22:1387,63,0	1/1:0,19:19:51.18:1123,51,0	1/1:0,15:15:42.14:926,42,0	1/1:1,19:20:51.18:1125,51,0	0/0:19,0:19:8.14:0,8,818	1/1:4,19:24:60.20:1273,60,0	0/0:21,0:21:48.13:0,48,707	0/0:30,0:30:87.27:0,87,1350	0/0:20,0:20:60.19:0,60,939	1/1:3,20:23:60.05:1196,60,0	1/1:1,20:21:57.20:1256,57,0	1/1:3,22:26:45.14:953,45,0	0/0:15,0:15:45.15:0,45,719	0/1:27,2:29:47.96:48,0,1167	0/0:30,0:30:90.26:0,90,1375	0/0:15,0:15:36.10:0,36,553
chr10	7537065	.	GTT	G	5528.49	PASS	AB=0.740;AC=30;AF=0.536;AN=56;BaseQRankSum=-0.483;DP=488;FS=17.142;HRun=12;HaplotypeScore=76.9822;InbreedingCoeff=0.8040;MQ=62.82;MQ0=1;MQRankSum=0.652;QD=19.60;ReadPosRankSum=1.736;VQSLOD=2.3636;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:15:29.52:0,30,300	1/1:3,6:11:2.46:135,2,0	0/0:16,0:9:14.03:0,14,154	0/1:11,1:8:15.45:15,0,143	1/1:4,22:28:44.32:548,44,0	0/1:3,1:16:5.05:5,0,54	0/0:3,0:8:9.98:0,10,35	1/1:2,17:18:45.09:457,45,0	0/0:2,1:16:5.43:0,5,99	1/1:3,21:24:60.09:610,60,0	1/1:5,24:29:69.12:700,69,0	1/1:4,6:12:14.49:186,14,0	1/1:2,11:13:33.07:330,33,0	1/1:1,10:12:23.77:296,24,0	1/1:4,21:25:54.08:549,54,0	1/1:3,13:17:38.82:378,39,0	0/0:3,1:13:8.26:0,8,50	1/1:2,13:15:36.06:360,36,0	0/0:4,0:18:40.95:0,41,212	0/0:4,0:23:44.64:0,45,156	0/0:12,0:12:33.05:0,33,382	1/1:1,16:17:39.05:397,39,0	1/1:4,15:20:38.80:378,39,0	1/1:1,9:11:17.79:183,18,0	0/0:1,0:17:34.93:0,35,123	0/0:23,2:27:14.18:0,14,882	0/0:29,0:32:77.18:0,77,998	0/0:9,0:9:12.04:0,12,179
chr10	7538402	.	A	AT	6656.12	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-4.543;DP=467;FS=5.289;HRun=8;HaplotypeScore=56.8210;InbreedingCoeff=0.9250;MQ=65.46;MQ0=0;MQRankSum=1.497;QD=26.10;ReadPosRankSum=1.023;VQSLOD=5.6877;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:12.27:0,12,118	1/1:1,6:7:18.05:208,18,0	0/0:6,0:5:2.97:0,3,20	0/0:7,0:8:3.01:0,3,24	1/1:2,23:25:60.03:650,60,0	0/0:20,1:20:4.33:0,4,281	0/0:10,0:10:23.99:0,24,215	1/1:12,33:45:74.81:1094,75,0	0/0:13,0:13:32.98:0,33,293	1/1:2,13:15:42.12:483,42,0	1/1:0,20:20:59.92:626,60,0	1/1:3,16:18:39.12:450,39,0	1/1:1,7:8:18:192,18,0	1/1:1,10:11:24.06:269,24,0	1/1:4,14:16:39.12:450,39,0	1/1:1,15:16:30.09:346,30,0	0/0:15,0:15:35.97:0,36,314	1/1:4,10:14:24.07:277,24,0	0/0:17,0:17:38.99:0,39,349	0/0:18,0:18:47.96:0,48,420	0/0:10,0:10:24:0,24,216	1/1:0,18:18:48.14:554,48,0	1/1:3,23:26:60.18:693,60,0	1/1:0,13:13:33.05:365,33,0	0/0:15,0:15:45.02:0,45,409	0/0:23,0:23:47.13:0,47,547	0/0:27,0:27:65.92:0,66,593	0/0:8,0:8:21.01:0,21,192
chr10	7539042	.	C	CT	8987.14	PASS	AB=0.950;AC=31;AF=0.554;AN=56;BaseQRankSum=7.160;DP=572;FS=3.456;HRun=7;HaplotypeScore=72.8726;InbreedingCoeff=0.9184;MQ=59.32;MQ0=4;MQRankSum=-1.232;QD=26.20;ReadPosRankSum=-0.052;VQSLOD=5.4478;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,20:24:57.17:688,57,0	1/1:2,9:11:24.07:290,24,0	0/0:18,0:8:9.03:0,9,156	0/1:18,1:13:13.62:14,0,214	1/1:6,28:34:75.23:901,75,0	0/0:19,0:19:48.07:0,48,464	0/0:10,0:10:24.02:0,24,226	1/1:9,20:23:42.12:494,42,0	0/0:13,0:13:39.06:0,39,376	1/1:4,25:29:75.23:906,75,0	1/1:5,30:35:93.16:1070,93,0	1/1:1,16:18:48.08:562,48,0	1/1:2,9:11:15.05:181,15,0	1/1:2,17:19:48.15:580,48,0	1/1:1,9:10:27.08:326,27,0	1/1:1,13:14:30.09:362,30,0	0/0:29,0:29:59.11:0,59,756	1/1:4,16:20:51.13:601,51,0	0/0:18,0:18:48.08:0,48,464	0/0:34,0:34:93.14:0,93,898	0/0:9,0:9:27.04:0,27,261	1/1:4,16:20:48.14:573,48,0	1/1:4,24:28:69.21:834,69,0	1/1:3,18:21:51.14:605,51,0	0/0:17,0:17:39.06:0,39,377	0/0:32,1:33:53.99:0,54,800	0/0:23,0:23:63.08:0,63,602	0/0:6,0:6:18.03:0,18,174
chr10	7539338	.	A	AT	7142.01	PASS	AB=0.529;AC=27;AF=0.482;AN=56;BaseQRankSum=-10.196;DP=536;FS=14.531;HRun=7;HaplotypeScore=54.3106;InbreedingCoeff=0.9143;MQ=60.88;MQ0=2;MQRankSum=0.250;QD=27.90;ReadPosRankSum=-1.733;VQSLOD=3.4713;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:60.09:0,60,579	1/1:0,2:2:6.02:72,6,0	0/0:24,0:17:20.43:0,20,266	0/0:18,0:14:39.06:0,39,374	1/1:2,18:20:48.15:580,48,0	0/0:21,0:21:57.09:0,57,550	0/0:12,0:12:24.03:0,24,232	1/1:6,27:30:43.23:793,43,0	0/0:10,0:10:30.05:0,30,290	1/1:4,19:23:57.17:688,57,0	1/1:3,19:22:50.95:535,51,0	1/1:1,14:15:36.11:435,36,0	1/1:1,9:10:24.07:290,24,0	1/1:0,20:20:45.14:544,45,0	1/1:4,23:27:69.21:833,69,0	1/1:1,24:25:40.20:753,40,0	0/0:40,0:40:99:0,108,1026	1/1:1,17:18:51.16:616,51,0	0/0:20,0:19:53.09:0,53,491	0/0:26,0:26:66.10:0,66,637	0/0:10,0:10:30.05:0,30,290	1/1:1,7:8:18.01:201,18,0	0/1:1,8:9:14.02:114,0,14	1/1:0,24:24:57.17:688,57,0	0/0:14,0:14:36.04:0,36,343	0/0:23,0:23:57.09:0,57,550	0/0:18,0:17:48.06:0,48,458	0/0:18,0:18:51.06:0,51,485
chr10	7539630	.	AG	A	1029.45	PASS	AB=0.922;AC=27;AF=0.482;AN=56;BaseQRankSum=14.156;DP=581;FS=159.104;HRun=2;HaplotypeScore=94.8767;InbreedingCoeff=0.6710;MQ=57.75;MQ0=9;MQRankSum=0.157;QD=4.60;ReadPosRankSum=2.301;VQSLOD=-0.0253;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,1:33:75.23:0,75,1364	1/1:7,0:7:3.98:26,4,0	0/0:12,0:7:21.07:0,21,300	0/0:14,0:12:34.13:0,34,432	1/1:13,0:13:2.34:38,2,0	0/0:22,1:23:47.27:0,47,964	0/0:31,1:32:67.43:0,67,1272	1/1:22,0:8:1.59:55,2,0	0/0:32,0:32:96.33:0,96,1437	1/1:21,0:20:30.01:190,30,0	1/1:13,0:13:9.93:47,10,0	0/1:13,2:15:18.13:79,0,18	1/1:11,0:11:1.38:31,1,0	1/1:17,2:18:28.57:122,29,0	1/1:16,2:18:30.30:143,30,0	1/1:12,0:12:20.28:86,20,0	0/0:42,1:42:91:0,91,1630	1/1:16,1:17:29.24:182,29,0	0/1:13,2:10:14.82:15,0,330	0/0:39,0:39:99:0,114,1683	0/0:17,0:17:51.14:0,51,722	0/1:9,0:9:1.04:27,0,1	1/1:15,0:15:1:35,1,0	1/1:17,0:17:22.73:154,23,0	0/0:37,0:37:99:0,111,1627	0/0:28,3:29:35.42:0,35,1136	0/0:36,0:35:99:0,108,1596	0/0:7,0:7:21.07:0,21,313
chr10	7541109	.	TGTGTCAGCACTCCTGG	T	2847.51	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.664;DP=600;FS=7.415;HRun=0;HaplotypeScore=247.3414;InbreedingCoeff=0.9449;MQ=66.37;MQ0=0;MQRankSum=-7.680;QD=98.19;ReadPosRankSum=0.703;VQSLOD=2.2107;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,24:29:63.22:2942,63,0	0/0:12,0:12:36.12:0,36,2722	0/0:19,0:17:48.16:0,48,2281	0/0:18,0:14:36.12:0,36,1859	0/0:24,0:24:72.23:0,72,5166	0/0:19,0:19:57.18:0,57,4105	0/0:19,0:19:57.18:0,57,3967	0/0:25,0:25:69.24:0,69,4111	0/0:35,0:35:99:0,105,7798	0/0:17,0:17:48.16:0,48,3621	0/0:19,0:19:54.19:0,54,4130	0/0:24,0:24:72.25:0,72,5343	0/0:22,0:22:66.20:0,66,4576	0/0:21,0:21:57.18:0,57,3992	0/0:20,0:20:60.18:0,60,4097	0/0:26,0:26:75.24:0,75,5665	0/0:26,0:26:78.25:0,78,5721	0/0:22,0:22:63.22:0,63,4502	0/0:21,0:21:63.22:0,63,3987	0/0:12,0:12:36.12:0,36,2370	0/0:34,0:34:99:0,102,6717	0/0:19,0:19:57.20:0,57,4140	0/0:17,0:17:51.18:0,51,3588	0/0:22,0:22:60.19:0,60,4481	0/0:18,0:18:54.19:0,54,4239	0/0:34,0:34:99:0,99,7462	0/0:23,0:23:66.23:0,66,5070	0/0:3,0:3:9.03:0,9,720
chr10	7541249	.	AC	A	7515.15	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=11.135;DP=558;FS=0.670;HRun=8;HaplotypeScore=63.9872;InbreedingCoeff=0.9982;MQ=74.81;MQ0=0;MQRankSum=-2.265;QD=25.39;ReadPosRankSum=1.504;VQSLOD=5.6517;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,26:33:78.12:753,78,0	1/1:0,10:10:30.05:290,30,0	0/0:16,0:16:30.93:0,31,367	0/0:16,0:16:28.38:0,28,320	1/1:3,22:24:63.07:600,63,0	0/0:21,0:20:48.15:0,48,580	0/0:8,0:8:24.06:0,24,279	1/1:4,21:25:60.08:573,60,0	0/0:22,1:23:40.23:0,40,768	1/1:2,19:21:60.10:579,60,0	1/1:2,16:18:47.87:463,48,0	1/1:1,19:20:51.08:492,51,0	1/1:2,14:16:42.06:405,42,0	1/1:4,12:16:36.05:347,36,0	1/1:1,25:26:75.12:724,75,0	1/1:0,18:18:54.09:521,54,0	0/0:31,0:31:87.25:0,87,1037	1/1:1,19:20:51.07:492,51,0	0/0:18,0:18:51.16:0,51,615	0/0:27,0:27:75.20:0,75,877	0/0:23,0:23:63.17:0,63,746	1/1:2,23:25:66.11:637,66,0	1/1:0,11:11:33.05:318,33,0	1/1:1,11:12:33.05:319,33,0	0/0:21,0:21:57.17:0,57,687	0/0:24,1:25:31.19:0,31,650	0/0:27,0:27:81.22:0,81,952	0/0:6,0:6:18.06:0,18,217
chr10	7542401	.	TTAAGTTTC	T	16888.96	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=17.309;DP=551;FS=5.161;HRun=0;HaplotypeScore=154.5349;InbreedingCoeff=0.9887;MQ=90.42;MQ0=0;MQRankSum=-16.872;QD=62.09;ReadPosRankSum=2.147;VQSLOD=4.8934;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:51.15:0,51,2132	1/1:0,8:8:18.06:503,18,0	0/0:31,0:31:78.27:0,78,3044	0/0:22,0:22:57.20:0,57,2250	1/1:2,31:33:72.25:1988,72,0	0/0:22,0:22:66.23:0,66,2900	0/0:20,0:20:57.18:0,57,2264	1/1:5,15:20:45.14:1122,45,0	0/0:14,0:14:42.13:0,42,1717	1/1:2,21:23:63.20:1664,63,0	1/1:5,27:32:66.14:1645,66,0	1/1:5,10:15:36.12:1002,36,0	1/1:1,11:12:27.56:756,28,0	1/1:1,18:19:51.18:1426,51,0	1/1:1,17:18:45.15:1258,45,0	1/1:2,18:20:36.12:1007,36,0	0/0:18,0:18:42.14:0,42,1847	1/1:3,4:7:9.03:252,9,0	0/0:12,0:12:30.10:0,30,1041	0/0:28,0:28:78.27:0,78,3428	0/0:10,0:10:30.10:0,30,1304	1/1:3,19:22:48.16:1342,48,0	1/1:1,33:34:90.31:2516,90,0	1/1:1,8:9:15.52:407,16,0	0/0:16,0:16:48.16:0,48,2112	0/0:24,0:24:69.24:0,69,2877	0/0:34,0:34:99:0,99,4124	0/0:11,0:11:33.11:0,33,1392
chr10	7543287	.	CA	C	723.44	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.736;DP=609;FS=6.935;HRun=3;HaplotypeScore=55.4243;InbreedingCoeff=0.9987;MQ=88.65;MQ0=0;MQRankSum=-3.408;QD=31.45;ReadPosRankSum=1.568;VQSLOD=3.5863;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:90.28:0,90,1275	0/0:12,0:12:33.11:0,33,475	0/0:22,0:22:59.67:0,60,810	0/0:22,0:22:59.87:0,60,819	0/0:21,0:21:63.21:0,63,907	0/0:32,0:32:93.31:0,93,1339	0/0:20,0:20:57.19:0,57,821	0/0:30,0:30:81.26:0,81,1147	0/0:22,1:23:32.04:0,32,912	0/0:23,0:23:69.22:0,69,964	0/0:19,0:19:57.19:0,57,811	0/0:19,0:19:54.16:0,54,743	0/0:17,0:17:51.16:0,51,717	0/0:23,0:23:69.23:0,69,994	1/1:0,23:23:66.21:818,66,0	0/0:17,0:17:51.17:0,51,733	0/0:19,0:19:57.14:0,57,778	0/0:12,0:12:36.10:0,36,499	0/0:34,0:33:99:0,102,1469	0/0:24,0:24:72.24:0,72,1037	0/0:28,0:28:81.27:0,81,1167	0/0:16,0:16:45.14:0,45,630	0/0:15,0:15:45.15:0,45,646	0/0:11,0:11:30.10:0,30,432	0/0:17,0:17:51.15:0,51,698	0/0:24,0:24:69.23:0,69,994	0/0:38,0:37:99:0,114,1605	0/0:16,0:16:45.12:0,45,611
chr10	7543752	.	A	AACACAC	6737.66	PASS	AB=0.974;AC=48;AF=0.889;AN=54;BaseQRankSum=-0.298;DP=796;FS=2.928;HRun=0;HaplotypeScore=201.8714;InbreedingCoeff=0.3979;MQ=53.79;MQ0=31;MQRankSum=-1.707;QD=9.95;ReadPosRankSum=-1.880;VQSLOD=3.7879;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:56.50:0,57,1061	1/1:9,4:14:3.01:73,3,0	0/0:31,0:15:3.01:0,3,44	./.	1/1:24,0:23:11.60:134,12,0	1/1:19,3:22:36.05:608,36,0	1/1:36,1:38:26.84:337,27,0	0/1:48,0:40:16.43:128,0,16	1/1:19,2:22:26.20:369,26,0	1/1:41,0:37:60.06:848,60,0	1/1:24,0:24:16.33:182,16,0	1/1:30,0:28:13.82:210,14,0	1/1:27,0:26:22.28:284,22,0	1/1:24,0:21:17.75:223,18,0	1/1:26,0:24:12.73:179,13,0	1/1:18,0:18:9.03:124,9,0	1/1:22,2:25:23.15:416,23,0	1/1:11,0:9:7.57:113,8,0	1/1:24,0:20:20.11:272,20,0	0/1:29,1:30:34.37:428,0,34	1/1:72,0:59:31.99:352,32,0	1/1:30,0:31:30.97:419,31,0	1/1:17,0:17:17.52:181,18,0	1/1:35,0:31:8.94:78,9,0	1/1:13,9:24:6.01:105,6,0	1/1:22,0:21:35.42:432,35,0	1/1:11,0:11:9.44:85,9,0	1/1:6,0:6:9.02:159,9,0
chr10	7543786	.	C	CA	2434.34	PASS	AB=0.894;AC=23;AF=0.426;AN=54;BaseQRankSum=3.612;DP=905;FS=136.957;HRun=1;HaplotypeScore=168.9358;InbreedingCoeff=-0.7260;MQ=40.76;MQ0=91;MQRankSum=-3.942;QD=3.21;ReadPosRankSum=-5.001;VQSLOD=-0.6810;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:45:60.61:0,61,1160	0/0:11,0:11:8.82:0,9,227	0/0:26,0:5:6.94:0,7,116	./.	0/1:21,4:25:29.26:29,0,308	0/1:21,0:20:13.09:13,0,254	0/1:39,1:41:99:125,0,586	0/1:73,2:48:99:159,0,927	0/1:26,0:23:99:114,0,169	0/1:52,3:44:99:333,0,813	0/1:16,10:23:99:243,0,222	0/1:23,6:26:58.69:59,0,316	0/1:25,3:24:56.13:56,0,257	0/1:26,4:26:99:100,0,397	0/1:21,1:21:41.04:41,0,247	0/1:11,3:13:43.83:44,0,142	0/1:20,0:18:1.01:1,0,255	0/1:15,2:13:70.41:70,0,156	0/1:38,0:19:99:114,0,256	0/1:27,0:24:81.15:81,0,283	0/1:92,16:87:99:271,0,1042	0/1:33,4:34:99:192,0,430	0/1:19,7:23:99:143,0,299	0/1:26,5:27:5.67:6,0,297	0/0:23,1:21:7.35:0,7,254	0/1:30,5:28:99:341,0,446	0/1:8,3:9:16.42:16,0,131	0/1:6,1:7:29.73:30,0,155
chr10	7543890	.	GCA	G	4174.56	PASS	AB=0.765;AC=24;AF=0.444;AN=54;BaseQRankSum=0.071;DP=1001;FS=5.567;HRun=0;HaplotypeScore=216.1480;InbreedingCoeff=0.7336;MQ=38.79;MQ0=67;MQRankSum=-2.604;QD=12.69;ReadPosRankSum=-0.766;VQSLOD=3.0290;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:33:48.12:0,48,753	1/1:4,7:9:18.01:207,18,0	0/0:99,0:9:14.85:0,15,162	0/0:111,1:19:11.89:0,12,276	1/1:9,11:18:18.06:229,18,0	0/0:21,0:20:0.84:0,1,517	0/0:44,0:39:23.84:0,24,896	0/1:44,9:38:99:293,0,343	0/0:32,0:30:39.92:0,40,899	1/1:15,15:25:12.60:685,13,0	./.	1/1:8,19:26:31.25:420,31,0	1/1:10,12:22:54.11:635,54,0	1/1:9,18:27:30.09:377,30,0	0/1:13,12:23:17.23:343,0,17	1/1:9,12:21:27.04:327,27,0	0/0:24,0:22:15.43:0,15,422	1/1:7,4:11:1.08:196,1,0	0/0:24,0:16:36.08:0,36,494	0/0:30,0:29:43.96:0,44,814	0/0:135,1:117:99:0,100,2098	1/1:9,16:23:6.02:77,6,0	1/1:9,19:28:21.02:233,21,0	1/1:17,12:24:11.99:152,12,0	0/0:24,0:24:32.60:0,33,508	0/0:51,0:46:32.20:0,32,948	0/0:19,0:18:32.94:0,33,626	0/0:3,0:2:6.02:0,6,101
chr10	7543921	.	AG	A	5891.21	PASS	AB=0.654;AC=32;AF=0.593;AN=54;BaseQRankSum=-0.307;DP=846;FS=7.994;HRun=1;HaplotypeScore=191.2371;InbreedingCoeff=-0.2073;MQ=36.68;MQ0=73;MQRankSum=2.114;QD=9.50;ReadPosRankSum=-0.389;VQSLOD=1.8384;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,24:26:36.97:421,37,0	0/1:1,7:8:10.60:87,0,11	0/0:97,4:11:24.02:0,24,310	0/0:97,11:15:34.28:0,34,420	0/1:1,13:13:0:0,0,0	0/1:11,6:15:71.75:211,0,72	0/1:17,20:29:99:440,0,281	0/1:17,23:34:99:808,0,145	0/1:12,12:20:99:268,0,146	0/1:6,23:26:25.33:803,0,25	0/0:0,15:14:0:0,0,0	1/1:3,22:25:18.82:220,19,0	1/1:2,12:13:23.93:278,24,0	1/1:1,23:22:18.17:188,18,0	1/1:3,15:16:9.03:126,9,0	1/1:2,11:12:7.15:87,7,0	0/1:12,9:18:99:171,0,103	0/1:3,7:8:23.95:229,0,24	0/1:19,2:14:43.63:44,0,426	0/1:13,10:22:99:199,0,147	0/1:47,58:84:99:552,0,202	0/1:2,21:19:0.25:0,0,0	1/1:2,21:22:3.99:45,4,0	1/1:8,21:20:8.24:103,8,0	0/1:6,14:20:23.39:219,0,23	0/1:27,9:33:99:234,0,789	0/1:6,5:11:99:157,0,196	./.
chr10	7543927	.	C	CAT	2448.69	PASS	AB=0.885;AC=21;AF=0.375;AN=56;BaseQRankSum=-2.442;DP=822;FS=0.495;HRun=0;HaplotypeScore=202.7458;InbreedingCoeff=-0.3008;MQ=34.71;MQ0=75;MQRankSum=5.864;QD=4.85;ReadPosRankSum=-1.034;VQSLOD=2.9350;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:15,18:26:32.28:405,32,0	0/1:9,0:9:10.91:28,0,11	0/0:101,0:10:15.65:0,16,195	0/0:106,0:12:21.40:0,21,222	0/0:14,0:13:0:0,0,0	0/1:9,4:10:57.55:58,0,60	0/1:23,10:26:99:294,0,261	0/1:46,0:39:40.07:40,0,310	0/1:13,7:17:99:251,0,149	0/0:29,0:25:16.03:0,16,301	0/1:15,0:14:0:0,0,1	0/1:22,0:22:15.88:16,0,28	0/1:11,0:10:0.01:0,0,47	0/1:24,0:22:8.70:26,0,9	0/1:18,0:16:0.05:13,0,0	0/0:13,0:12:3.87:0,4,25	0/1:16,7:19:99:191,0,129	0/1:10,0:8:1.23:1,0,83	0/1:22,1:14:34.85:35,0,302	0/1:15,6:21:99:181,0,122	0/1:69,28:76:99:524,0,190	0/1:22,0:19:0:0,0,1	0/0:22,0:21:2.97:0,3,21	0/0:29,0:18:5.60:0,6,33	0/1:9,10:19:41.85:130,0,42	0/1:31,4:33:99:240,0,714	0/1:6,4:10:99:159,0,188	0/0:2,0:1:2.74:0,3,12
chr10	7543952	.	A	AG	1335.30	PASS	AB=0.807;AC=11;AF=0.204;AN=54;BaseQRankSum=-3.025;DP=642;FS=10.645;HRun=0;HaplotypeScore=156.2805;InbreedingCoeff=-0.1672;MQ=26.24;MQ0=79;MQRankSum=-0.150;QD=5.00;ReadPosRankSum=4.330;VQSLOD=2.5400;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,1:23:15.15:0,15,147	0/0:6,0:6:5.88:0,6,47	0/0:63,0:6:17.91:0,18,206	0/0:76,0:5:15.04:0,15,191	./.	0/0:6,4:9:4.26:0,4,44	0/1:18,6:19:99:251,0,120	0/0:32,0:22:36.55:0,37,439	0/1:8,6:12:68.91:69,0,130	0/0:23,0:19:49.84:0,50,578	0/1:12,0:11:0:0,0,0	0/0:17,0:15:2.99:0,3,26	0/0:9,0:7:2.67:0,3,41	0/0:17,0:14:0.87:0,1,3	0/0:15,0:14:0.27:0,0,1	0/0:11,0:8:3.01:0,3,41	0/1:19,10:25:99:221,0,229	0/0:8,0:7:18.04:0,18,207	0/1:13,1:3:14.88:64,0,15	0/1:5,8:13:11.98:12,0,18	0/1:70,16:69:56.67:57,0,382	0/1:18,0:15:0:0,0,1	0/0:14,0:14:3.01:0,3,42	0/0:34,0:22:6.22:0,6,74	0/1:11,5:17:47.75:48,0,71	0/1:9,10:20:72.27:574,0,72	0/1:4,3:7:67.60:165,0,68	0/0:1,0:1:3.01:0,3,40
chr10	7543980	.	AC	A	445.92	PASS	AB=0.842;AC=19;AF=0.396;AN=48;BaseQRankSum=1.971;DP=514;FS=2.130;HRun=2;HaplotypeScore=102.1638;InbreedingCoeff=0.1239;MQ=23.42;MQ0=77;MQRankSum=-0.994;QD=3.01;ReadPosRankSum=1.217;VQSLOD=0.2451;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:17:2.92:0,3,17	0/0:6,0:5:1.61:0,2,11	0/0:77,0:7:7.63:0,8,77	0/0:76,0:8:18.04:0,18,210	./.	0/1:8,1:7:5.25:5,0,28	0/1:21,4:12:18.04:18,0,47	0/0:17,0:10:20.74:0,21,196	0/0:8,2:7:1.60:0,2,5	0/1:18,0:15:3.95:4,0,127	./.	1/1:12,1:12:5.39:52,5,0	1/1:9,0:8:2.99:23,3,0	1/1:6,1:6:2.98:22,3,0	./.	1/1:6,2:6:3.01:38,3,0	0/1:16,7:18:75.19:116,0,75	0/1:7,1:6:35.97:40,0,36	0/0:12,0:3:5.95:0,6,58	0/0:8,4:11:2.62:0,3,39	0/0:59,10:51:0.35:0,0,3	0/0:6,4:7:0:0,0,0	./.	0/0:24,4:20:2.91:0,3,21	0/1:5,3:8:0:0,0,0	0/1:10,5:11:16.04:164,0,16	1/1:3,1:3:6.48:55,6,0	1/1:0,1:1:3.01:38,3,0
chr10	7543981	.	C	CA	513.47	PASS	AB=0.975;AC=21;AF=0.438;AN=48;BaseQRankSum=2.251;DP=483;FS=3.459;HRun=1;HaplotypeScore=93.8240;InbreedingCoeff=0.1472;MQ=23.23;MQ0=76;MQRankSum=0.600;QD=3.52;ReadPosRankSum=0.743;VQSLOD=0.3880;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:15:2.98:0,3,27	0/0:5,0:4:1.19:0,1,6	0/0:76,0:7:7.48:0,7,77	0/0:75,0:8:18.04:0,18,211	./.	1/1:5,2:5:2.14:7,2,0	0/1:25,0:12:19.91:20,0,47	0/0:16,0:9:20.50:0,20,185	0/0:9,0:6:2.29:0,2,6	0/1:16,0:13:13.08:13,0,148	./.	1/1:11,1:11:4.11:28,4,0	1/1:9,0:8:3.46:24,3,0	1/1:6,1:6:3.37:22,3,0	./.	1/1:7,0:5:3.01:38,3,0	0/1:21,1:17:66.46:118,0,66	0/1:7,0:5:32.66:44,0,33	0/0:12,0:3:6.01:0,6,69	0/0:11,1:11:2.46:0,2,40	0/0:62,4:50:0.37:0,0,2	0/1:9,0:6:0.01:0,0,0	./.	0/0:17,6:15:2.86:0,3,21	0/1:7,0:7:0:0,0,0	0/1:11,2:9:16.66:197,0,17	1/1:3,1:3:6.49:95,6,0	1/1:1,0:1:3.01:38,3,0
chr10	7543987	.	AG	A	358.26	PASS	AB=0.819;AC=22;AF=0.440;AN=50;BaseQRankSum=2.961;DP=435;FS=5.266;HRun=1;HaplotypeScore=87.8680;InbreedingCoeff=0.0789;MQ=23.86;MQ0=68;MQRankSum=1.507;QD=2.33;ReadPosRankSum=1.063;VQSLOD=-0.6847;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,1:14:2.88:0,3,30	0/0:5,0:4:3.05:0,3,42	0/0:72,0:7:13.84:0,14,159	0/0:74,0:8:21.06:0,21,272	0/1:5,0:5:0:0,0,0	1/1:4,0:3:2.99:23,3,0	0/1:20,3:12:18.25:18,0,99	0/1:7,1:4:29.95:30,0,42	0/0:7,0:5:5.61:0,6,55	0/1:9,2:12:57.52:58,0,198	./.	1/1:11,2:13:5.61:56,6,0	1/1:9,0:8:2.74:15,3,0	1/1:3,1:5:2.88:15,3,0	0/1:8,1:8:0:0,0,0	./.	0/1:14,4:15:48.84:49,0,181	0/1:3,2:3:1.59:66,0,2	0/0:8,0:3:6.02:0,6,96	0/0:8,4:11:5.48:0,5,65	0/0:38,18:49:4.09:0,4,52	0/1:5,2:5:0:0,0,0	./.	1/1:12,4:15:3:39,3,0	0/0:4,2:7:0.47:0,0,1	0/1:3,3:4:35.98:73,0,36	0/1:1,1:2:23.54:24,0,39	1/1:2,0:2:3:26,3,0
chr10	7543988	.	GCACACAACACACA	G	1376	PASS	AB=0.990;AC=31;AF=0.646;AN=48;BaseQRankSum=0.259;DP=450;FS=0.939;HRun=0;HaplotypeScore=106.1651;InbreedingCoeff=0.0518;MQ=24.15;MQ0=67;MQRankSum=0.908;QD=6.71;ReadPosRankSum=0.595;VQSLOD=2.0588;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:14:1.24:3,1,0	1/1:5,1:4:2.74:38,3,0	0/0:72,0:7:16.52:0,17,138	0/0:74,0:8:21.07:0,21,299	1/1:3,3:6:2.50:9,2,0	1/1:5,0:3:2.97:20,3,0	0/1:23,0:14:85.32:85,0,112	0/1:13,0:7:22.86:23,0,85	1/1:9,0:7:5.16:67,5,0	0/1:12,1:12:30.46:378,0,30	./.	1/1:7,7:13:5.49:198,5,0	1/1:4,5:9:5.68:146,6,0	1/1:5,1:5:2.14:116,2,0	./.	./.	0/1:19,0:15:60.26:79,0,60	0/1:5,0:3:99:108,0,119	0/1:9,0:3:15.42:15,0,19	0/0:12,0:11:2.90:0,3,33	0/0:65,0:49:7.79:0,8,64	1/1:9,0:7:5.62:45,6,0	./.	1/1:21,0:15:1.35:109,1,0	1/1:8,0:8:2.90:43,3,0	0/1:6,0:4:4.77:5,0,34	1/1:2,0:2:3.01:32,3,0	0/0:1,0:2:4.46:0,4,20
chr10	7543994	.	A	AT	186.06	PASS	AB=0.925;AC=13;AF=0.271;AN=48;BaseQRankSum=3.252;DP=458;FS=2.119;HRun=0;HaplotypeScore=90.7336;InbreedingCoeff=-0.0301;MQ=24.49;MQ0=71;MQRankSum=-0.801;QD=1.43;ReadPosRankSum=2.572;VQSLOD=1.7170;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:16:2.43:22,2,0	1/1:5,0:3:2.97:21,3,0	0/0:72,0:7:16.86:0,17,196	0/0:74,0:8:21.06:0,21,277	0/0:5,0:5:3.01:0,3,38	1/1:5,0:3:2.98:21,3,0	0/1:18,3:14:12.69:13,0,166	0/1:23,2:13:81.80:83,0,82	0/0:6,2:7:6.37:0,6,59	0/1:10,0:10:59.60:60,0,65	./.	0/0:12,0:11:5.20:0,5,28	0/0:9,0:9:3.59:0,4,10	0/0:6,0:6:4.09:0,4,45	./.	./.	0/1:18,0:18:45.36:45,0,148	0/1:7,0:4:28.48:28,0,49	0/0:10,0:4:5.99:0,6,59	0/0:8,0:11:5.38:0,5,52	0/0:45,8:44:10.85:0,11,61	0/0:7,0:6:2.48:0,2,20	./.	0/0:18,0:12:1.37:0,1,4	0/0:6,0:7:3:0,3,26	0/1:3,0:2:0.50:0,0,15	0/0:1,0:2:2.97:0,3,20	0/1:2,0:3:20.70:21,0,30
chr10	7544001	.	A	AG	859.63	PASS	AB=0.885;AC=20;AF=0.417;AN=48;BaseQRankSum=-1.734;DP=486;FS=3.897;HRun=0;HaplotypeScore=98.2785;InbreedingCoeff=0.2093;MQ=26.72;MQ0=68;MQRankSum=2.114;QD=4.45;ReadPosRankSum=-2.149;VQSLOD=2.9830;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:19:3.47:0,3,31	0/0:7,0:4:5.60:0,6,82	0/0:59,0:5:11.92:0,12,119	0/0:58,0:7:15.04:0,15,190	0/0:5,0:6:1.82:0,2,5	0/0:6,0:4:3:0,3,28	0/1:19,7:18:90.26:132,0,90	0/1:31,1:19:49.92:50,0,203	1/1:7,2:7:8.37:81,8,0	0/1:14,0:11:70.75:71,0,180	./.	1/1:11,0:12:8.62:60,9,0	1/1:11,0:9:6.41:46,6,0	1/1:7,2:8:11.97:126,12,0	./.	./.	0/1:16,5:18:99:207,0,137	0/1:5,2:4:61.49:77,0,61	0/0:9,0:4:2.90:0,3,16	0/0:11,0:11:2.54:0,3,41	0/0:73,2:53:7.60:0,8,100	1/1:7,3:8:8.07:68,8,0	./.	1/1:18,4:14:2.37:47,2,0	1/1:9,1:10:3:43,3,0	0/0:7,0:5:14.87:0,15,157	0/1:5,0:3:5.87:6,0,36	0/0:4,0:4:12.01:0,12,135
chr10	7547137	.	C	CT	13216.79	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=0.215;DP=590;FS=4.186;HRun=6;HaplotypeScore=70.7819;InbreedingCoeff=0.9834;MQ=79.89;MQ0=0;MQRankSum=0.348;QD=31.77;ReadPosRankSum=0.479;VQSLOD=5.2790;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:85.07:0,85,858	1/1:2,10:12:27.09:340,27,0	0/0:26,0:26:40.26:0,40,568	0/0:15,0:16:9.19:0,9,248	1/1:3,21:24:63.16:772,63,0	1/1:0,26:26:60.19:755,60,0	1/1:2,15:17:42.61:529,43,0	1/1:6,25:32:75.21:927,75,0	1/1:1,17:18:42.13:528,42,0	1/1:1,20:21:60.15:722,60,0	1/1:2,24:26:69.18:850,69,0	1/1:3,11:14:27.09:340,27,0	1/1:2,14:16:36.11:450,36,0	1/1:0,11:11:33.11:415,33,0	1/1:0,15:15:42.13:528,42,0	1/1:1,16:17:45.14:566,45,0	1/1:2,34:36:99:1245,99,0	1/1:1,9:10:27.09:340,27,0	1/1:1,22:23:66.21:822,66,0	1/1:3,28:31:78.16:943,78,0	0/0:18,0:18:48.11:0,48,490	1/1:2,26:28:72.23:899,72,0	1/1:2,15:17:42.13:529,42,0	1/1:0,5:5:12.04:151,12,0	1/1:2,15:17:45.14:566,45,0	0/0:24,1:25:31.41:0,31,636	0/0:29,0:29:87.20:0,87,888	0/0:29,0:29:81.18:0,81,826
chr10	7548690	.	GGGGTT	G	9540.02	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-16.417;DP=705;FS=2.381;HRun=0;HaplotypeScore=212.6842;InbreedingCoeff=0.9995;MQ=76.27;MQ0=0;MQRankSum=-7.586;QD=54.51;ReadPosRankSum=-0.561;VQSLOD=5.1188;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,147,2420	0/0:12,0:12:36.12:0,36,599	0/0:13,0:14:35.08:0,35,538	0/0:15,0:15:31.66:0,32,517	0/0:37,0:37:99:0,106,1771	1/1:2,24:26:54.18:1186,54,0	1/1:2,18:20:45.15:988,45,0	0/0:26,0:26:75.15:0,75,1251	1/1:1,29:30:84.29:1844,84,0	0/0:22,0:22:65.96:0,66,1061	0/0:21,0:21:58.53:0,59,927	0/0:21,0:21:54.18:0,54,897	0/0:37,0:37:90.15:0,90,1465	0/0:28,0:28:72.25:0,72,1196	0/0:38,0:38:99:0,99,1653	0/0:21,0:21:60.20:0,60,1016	1/1:1,24:25:63.22:1384,63,0	0/0:13,0:13:35.99:0,36,564	1/1:3,20:23:60.19:1243,60,0	1/1:0,29:29:87.08:1653,87,0	0/0:39,0:39:99:0,105,1754	0/0:25,0:25:72.23:0,72,1141	0/0:19,0:19:50.76:0,51,833	0/0:29,0:29:78.24:0,78,1280	1/1:1,21:22:60.16:1242,60,0	0/0:28,0:28:78.22:0,78,1250	0/0:23,0:23:63.22:0,63,1079	0/0:8,0:8:24.08:0,24,399
chr10	7551573	.	A	ATTAAC	15391.66	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-7.877;DP=706;FS=2.813;HRun=0;HaplotypeScore=170.8135;InbreedingCoeff=0.9909;MQ=83.76;MQ0=0;MQRankSum=-18.060;QD=65.22;ReadPosRankSum=0.226;VQSLOD=5.7990;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:55:99:0,148,2941	0/0:11,0:11:27.08:0,27,516	0/0:29,0:29:62.98:0,63,1113	0/0:25,0:26:54.05:0,54,1038	0/0:28,0:28:81.26:0,81,1614	1/1:2,19:22:57.20:1728,57,0	1/1:6,10:18:36.12:1055,36,0	0/0:38,0:38:99:0,99,1954	1/1:5,16:22:51.18:1550,51,0	0/0:33,0:33:90.29:0,90,1756	0/0:24,0:24:60.13:0,60,1098	0/0:37,0:37:99:0,102,2041	0/0:17,0:17:45.15:0,45,889	0/0:30,0:30:72.23:0,72,1440	0/0:29,0:29:78.27:0,78,1600	0/0:23,0:23:57.18:0,57,1133	1/1:7,13:21:42.14:1222,42,0	0/0:15,0:15:36.12:0,36,739	1/1:10,10:20:42.12:1139,42,0	1/1:9,22:31:69.19:1980,69,0	1/1:5,10:17:21.07:579,21,0	0/0:20,0:20:48.16:0,48,985	0/0:16,0:16:42.14:0,42,841	0/0:39,0:39:99:0,111,2165	1/1:5,19:24:59.87:1703,60,0	1/1:7,16:23:51.17:1507,51,0	1/1:3,29:35:90.22:2663,90,0	1/1:2,1:3:9.03:264,9,0
chr10	7553459	.	CT	C	8373.92	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=2.473;DP=552;FS=2.813;HRun=10;HaplotypeScore=65.9078;InbreedingCoeff=0.8432;MQ=75.23;MQ0=1;MQRankSum=-2.473;QD=17.16;ReadPosRankSum=3.761;VQSLOD=5.6517;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:81.04:0,81,869	1/1:0,9:9:26.99:234,27,0	0/0:19,0:16:16.48:0,16,217	0/0:14,1:12:0.07:0,0,165	1/1:6,30:36:76.77:655,77,0	1/1:3,18:21:38.99:339,39,0	1/1:2,6:8:17.99:156,18,0	1/1:9,23:32:68.94:595,69,0	1/1:0,10:10:23.99:208,24,0	1/1:4,17:21:50.99:443,51,0	1/1:2,28:30:80.98:703,81,0	1/1:1,19:20:41.98:365,42,0	1/1:1,11:12:32.99:287,33,0	1/1:2,17:19:44.98:391,45,0	1/1:2,19:21:11.83:331,12,0	1/1:1,11:12:6.56:211,7,0	1/1:2,11:13:29.99:260,30,0	1/1:3,13:16:35.99:312,36,0	1/1:3,17:20:53.95:460,54,0	1/1:5,25:30:71.95:625,72,0	1/1:2,0:18:22.40:66,22,0	1/1:2,7:9:20.99:181,21,0	1/1:3,18:21:44.99:391,45,0	1/1:3,12:15:35.99:313,36,0	1/1:1,24:25:59.98:521,60,0	1/1:5,1:30:43.61:149,44,0	1/1:3,0:30:42.67:125,43,0	1/1:0,0:10:18.33:54,18,0
chr10	7554391	.	AT	A	241.96	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.417;DP=572;FS=0.000;HRun=7;HaplotypeScore=88.7791;InbreedingCoeff=0.9428;MQ=79.88;MQ0=0;MQRankSum=-2.822;QD=20.16;ReadPosRankSum=1.501;VQSLOD=2.9956;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,12:12:33.08:337,33,0	0/0:12,0:12:36.12:0,36,453	0/0:17,0:17:39.11:0,39,465	0/0:11,0:11:9.45:0,9,114	0/0:34,0:34:99:0,99,1245	0/0:27,0:27:78.20:0,78,952	0/0:13,0:13:39.12:0,39,490	0/0:36,0:36:96.30:0,96,1198	0/0:15,0:15:39.12:0,39,491	0/0:43,0:43:99:0,123,1537	0/0:29,0:29:87.27:0,87,1076	0/0:10,0:10:27.09:0,27,337	0/0:13,0:13:39.12:0,39,490	0/0:15,0:15:39.12:0,39,490	0/0:16,0:16:42.13:0,42,528	0/0:15,0:15:36.12:0,36,453	0/0:24,0:24:66.19:0,66,813	0/0:15,0:15:42.13:0,42,528	0/0:17,0:17:48.15:0,48,603	0/0:37,0:37:99:0,105,1297	0/0:7,0:7:21.07:0,21,264	0/0:23,0:23:66.21:0,66,830	0/0:26,0:26:69.17:0,69,829	0/0:10,0:10:30.10:0,30,377	0/0:32,0:32:90.29:0,90,1132	0/0:19,0:19:57.18:0,57,707	0/0:35,0:35:93.29:0,93,1158	0/0:9,0:9:27.09:0,27,340
chr10	7554836	.	G	GGTGTGTGTGT	15663.14	PASS	AB=0.616;AC=32;AF=0.571;AN=56;BaseQRankSum=4.754;DP=728;FS=2.970;HRun=0;HaplotypeScore=237.1034;InbreedingCoeff=0.6871;MQ=60.58;MQ0=4;MQRankSum=-10.218;QD=35.60;ReadPosRankSum=-1.283;VQSLOD=4.3101;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:44.30:0,44,1310	1/1:7,4:12:21.07:889,21,0	0/0:43,0:27:18.06:0,18,419	0/0:40,0:22:15.04:0,15,313	1/1:18,9:29:21.07:991,21,0	0/0:26,0:27:60.07:0,60,1471	0/0:18,0:19:36.11:0,36,988	1/1:33,0:33:27.08:728,27,0	0/0:32,0:33:63.21:0,63,1741	1/1:21,5:30:51.12:1800,51,0	1/1:16,10:29:30.57:1271,31,0	1/1:14,1:25:30.10:1288,30,0	1/1:12,0:24:27.05:1035,27,0	1/1:26,0:30:24.08:1035,24,0	1/1:15,6:26:27.09:1151,27,0	0/1:11,7:21:57.69:1365,0,58	0/0:24,0:25:41.44:0,41,1663	1/1:10,1:11:12.02:308,12,0	0/0:7,0:8:12.03:0,12,277	0/0:38,0:40:75.26:0,75,2222	0/1:8,0:25:79.98:97,0,80	1/1:21,1:27:30.10:1288,30,0	1/1:12,2:22:10.51:1255,11,0	1/1:13,1:21:15.52:589,16,0	0/0:23,0:25:54.19:0,54,1614	1/1:12,1:28:42.47:463,42,0	0/1:9,0:28:33.06:87,0,33	0/1:4,0:12:23.13:23,0,103
chr10	7555921	.	GAC	G	1083.90	PASS	AB=0.749;AC=20;AF=0.370;AN=54;BaseQRankSum=-0.076;DP=576;FS=0.688;HRun=0;HaplotypeScore=119.5747;InbreedingCoeff=0.4665;MQ=68.40;MQ0=8;MQRankSum=3.109;QD=4.30;ReadPosRankSum=2.625;VQSLOD=2.6903;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,5:20:12.75:115,13,0	0/0:2,0:9:3.47:0,3,27	0/0:21,0:17:0.47:0,0,1	0/0:30,0:25:0.89:0,1,2	0/0:32,0:32:10.59:0,11,92	0/1:12,4:15:50.84:51,0,117	1/1:13,6:19:3.01:33,3,0	0/0:19,0:19:20.82:0,21,172	0/1:9,4:16:1.23:139,0,1	0/0:17,0:17:29.43:0,29,248	0/0:10,0:10:3:0,3,25	0/0:20,0:19:20.59:0,21,182	0/0:10,0:23:3:0,3,26	0/0:20,0:19:12.82:0,13,110	./.	0/0:15,0:23:3:0,3,26	1/1:17,3:22:17.07:166,17,0	0/0:14,0:13:11.36:0,11,91	1/1:14,2:16:11.01:91,11,0	1/1:15,3:21:27.80:232,28,0	0/1:36,0:36:32.85:33,0,94	0/0:25,0:25:7.74:0,8,56	0/0:12,0:20:4.50:0,4,45	0/0:8,0:15:8.97:0,9,77	1/1:17,7:24:21.05:231,21,0	1/1:18,0:27:14.20:70,14,0	0/1:6,0:24:12.90:83,0,13	1/1:5,0:7:2.84:14,3,0
chr10	7556482	.	C	CACAA	15024.22	PASS	AB=1.000;AC=31;AF=0.554;AN=56;BaseQRankSum=-14.818;DP=676;FS=1.169;HRun=0;HaplotypeScore=114.2459;InbreedingCoeff=0.9183;MQ=64.34;MQ0=2;MQRankSum=-0.833;QD=36.73;ReadPosRankSum=0.359;VQSLOD=4.9992;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,27:35:51.64:1204,52,0	1/1:3,17:21:54.06:1163,54,0	0/0:24,0:18:26.65:0,27,331	0/0:35,0:30:40.98:0,41,575	1/1:12,23:37:69.03:1420,69,0	0/0:9,0:30:50.80:0,51,459	0/0:7,0:23:36.04:0,36,335	1/1:21,15:37:51.90:885,52,0	0/0:4,0:16:29.48:0,29,263	1/1:7,19:26:13.64:1271,14,0	1/1:5,21:26:53.84:1092,54,0	1/1:6,9:15:17.95:384,18,0	1/1:4,16:21:39.13:956,39,0	1/1:5,13:18:21.07:515,21,0	1/1:6,20:27:44.87:1094,45,0	1/1:6,20:28:48.16:1175,48,0	0/0:5,0:23:33.95:0,34,332	1/1:7,16:22:36.12:882,36,0	0/1:4,0:22:29.51:30,0,218	0/0:3,0:21:39.04:0,39,364	0/0:16,0:16:39.12:0,39,618	1/1:7,16:23:41.97:894,42,0	1/1:6,29:35:72.25:1765,72,0	1/1:5,9:15:12.04:294,12,0	0/0:1,0:15:39.04:0,39,363	0/0:21,0:21:51.16:0,51,816	0/0:34,0:34:75.24:0,75,1212	0/0:8,0:8:24.06:0,24,369
chr10	7556859	.	GCA	G	18235.37	PASS	AB=0.667;AC=51;AF=0.911;AN=56;BaseQRankSum=-1.796;DP=761;FS=5.997;HRun=0;HaplotypeScore=160.6621;InbreedingCoeff=0.8233;MQ=60.27;MQ0=1;MQRankSum=0.407;QD=25.68;ReadPosRankSum=7.548;VQSLOD=4.9992;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,35:42:84.18:1047,84,0	1/1:2,11:13:32.97:415,33,0	0/0:22,0:15:35.76:0,36,452	0/0:28,0:20:37.59:0,38,535	1/1:5,12:17:30.01:358,30,0	1/1:6,21:27:54.17:687,54,0	1/1:3,21:24:44.86:605,45,0	1/1:6,21:27:57.08:723,57,0	1/1:7,17:24:48.15:610,48,0	1/1:7,21:28:66.21:837,66,0	1/1:1,14:15:39.02:472,39,0	1/1:3,45:48:99:1409,111,0	1/1:8,27:35:75.24:953,75,0	1/1:4,35:39:93.30:1180,93,0	1/1:2,22:24:54.17:686,54,0	1/1:3,19:22:41.26:532,41,0	1/1:6,26:32:57.18:720,57,0	1/1:3,15:18:17.78:436,18,0	0/1:8,8:16:4.74:277,0,5	1/1:7,23:29:54.04:646,54,0	1/1:12,36:48:87.19:1105,87,0	1/1:5,33:37:71.98:853,72,0	1/1:5,26:31:51.16:644,51,0	1/1:5,23:28:57.18:725,57,0	1/1:4,22:25:51.16:648,51,0	1/1:6,26:32:75.02:904,75,0	1/1:1,16:17:36.12:457,36,0	1/1:0,9:9:24.08:305,24,0
chr10	7565098	.	G	GACA	15325.78	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-1.568;DP=639;FS=6.193;HRun=0;HaplotypeScore=94.9235;InbreedingCoeff=0.9953;MQ=96.42;MQ0=0;MQRankSum=-7.015;QD=61.06;ReadPosRankSum=3.354;VQSLOD=6.7645;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,12:13:39.13:847,39,0	0/0:14,0:14:42.14:0,42,700	0/0:34,0:34:99:0,102,1628	0/0:31,0:31:75:0,75,1069	0/0:24,0:24:69.24:0,69,1147	0/0:24,0:24:69.24:0,69,1150	0/0:19,0:19:51.16:0,51,820	0/0:29,0:29:87.29:0,87,1426	0/0:24,0:24:72.25:0,72,1200	0/0:21,0:21:60.21:0,60,998	0/0:19,0:19:57.19:0,57,949	1/1:3,21:24:69.24:1546,69,0	1/1:0,27:27:81.28:1834,81,0	1/1:2,12:14:42.14:949,42,0	0/0:27,0:27:81.25:0,81,1299	0/0:25,0:25:69.24:0,69,1143	0/0:27,0:27:78.27:0,78,1299	0/0:24,0:24:72.25:0,72,1198	0/0:7,0:7:12.04:0,12,200	0/0:16,0:16:45.14:0,45,725	1/1:0,18:19:54.19:1195,54,0	1/1:1,17:19:57.20:1214,57,0	1/1:2,17:19:48.16:1081,48,0	1/1:2,32:35:81.28:1836,81,0	0/0:23,0:23:63.22:0,63,1046	1/1:3,28:33:46.31:1985,46,0	1/1:1,36:38:99:2295,102,0	1/1:0,9:10:24.08:544,24,0
chr10	7569193	.	C	CA	17866.87	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-4.578;DP=584;FS=1.347;HRun=5;HaplotypeScore=63.0437;InbreedingCoeff=0.9973;MQ=74.11;MQ0=0;MQRankSum=-9.846;QD=33.21;ReadPosRankSum=6.303;VQSLOD=4.7054;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,23:26:47.99:612,48,0	1/1:0,9:9:24.08:316,24,0	0/0:23,0:23:60.13:0,60,641	0/0:23,0:23:51.12:0,51,542	1/1:2,22:24:57.19:750,57,0	1/1:2,27:29:69.22:907,69,0	1/1:2,12:14:33.11:434,33,0	1/1:3,19:22:54.16:690,54,0	1/1:1,20:21:57.19:749,57,0	1/1:2,21:23:63.20:829,63,0	1/1:2,28:30:72.23:947,72,0	1/1:1,13:14:36.12:474,36,0	1/1:0,16:16:45.15:591,45,0	1/1:0,19:19:54.18:710,54,0	1/1:2,13:15:33.11:434,33,0	1/1:1,23:24:60.20:789,60,0	1/1:2,15:17:45.15:592,45,0	1/1:1,14:15:42.14:552,42,0	1/1:2,13:15:39.13:513,39,0	1/1:1,37:38:99:1342,102,0	1/1:0,10:10:24.08:316,24,0	1/1:3,23:26:66.21:861,66,0	1/1:3,26:29:70.47:910,70,0	1/1:2,14:16:33.11:434,33,0	1/1:1,18:19:51.17:671,51,0	1/1:3,29:32:87.28:1144,87,0	1/1:2,21:23:63.20:829,63,0	1/1:0,11:12:36.12:472,36,0
chr10	7572958	.	T	TA	106.40	PASS	AB=0.818;AC=6;AF=0.176;AN=34;BaseQRankSum=2.078;DP=232;FS=5.014;HRun=10;HaplotypeScore=33.2826;InbreedingCoeff=0.4586;MQ=43.95;MQ0=50;MQRankSum=-1.242;QD=4.26;ReadPosRankSum=-0.892;VQSLOD=-0.5042;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,22:37:27.74:0,28,414	./.	0/1:4,0:3:5.31:5,0,16	./.	0/1:3,4:5:15.60:55,0,16	0/0:12,0:10:23.01:0,23,178	0/0:4,0:4:11.99:0,12,98	0/0:3,1:1:3:0,3,25	0/0:12,0:10:23.97:0,24,197	1/1:1,5:5:12.02:122,12,0	1/1:4,4:7:3.01:32,3,0	./.	./.	./.	./.	./.	0/0:14,0:13:29.91:0,30,238	./.	0/0:23,0:20:57.97:0,58,450	0/0:6,0:6:14.96:0,15,120	0/0:10,1:6:14.98:0,15,123	./.	./.	./.	0/0:5,0:4:10.95:0,11,72	0/0:25,0:19:56.93:0,57,468	0/0:16,0:12:26.89:0,27,221	0/0:15,0:9:26.97:0,27,222
chr10	7580363	.	A	ATT	1551.13	PASS	AB=0.883;AC=24;AF=0.632;AN=38;BaseQRankSum=-2.158;DP=388;FS=0.000;HRun=2;HaplotypeScore=12.4805;InbreedingCoeff=0.4095;MQ=16.06;MQ0=72;MQRankSum=4.566;QD=10.48;ReadPosRankSum=0.705;VQSLOD=0.5233;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	1/1:1,2:1:3.01:56,3,0	0/0:29,0:4:9.03:0,9,132	0/0:25,0:8:12.02:0,12,147	1/1:4,6:4:12:184,12,0	./.	./.	0/0:14,0:1:3:0,3,25	./.	0/1:9,1:4:76.31:97,0,76	1/1:7,2:3:8.24:119,8,0	0/0:5,4:1:3:0,3,29	1/1:1,4:1:3.01:56,3,0	1/1:7,3:1:2.97:20,3,0	./.	./.	./.	0/0:15,2:8:6:0,6,52	0/0:28,3:1:3.01:0,3,44	0/1:20,4:2:22.79:50,0,23	./.	1/1:1,9:4:9.03:168,9,0	1/1:5,9:5:15.01:244,15,0	./.	1/1:2,4:2:6.02:112,6,0	1/1:8,8:6:18.06:337,18,0	1/1:13,4:3:3.01:56,3,0	1/1:8,6:7:12.01:189,12,0
chr10	7581463	.	GGCGTCC	G	1735.79	PASS	AB=0.611;AC=15;AF=0.341;AN=44;BaseQRankSum=7.640;DP=582;FS=46.089;HRun=0;HaplotypeScore=52.6908;InbreedingCoeff=0.6559;MQ=26.55;MQ0=182;MQRankSum=-4.248;QD=13.46;ReadPosRankSum=1.431;VQSLOD=0.8093;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:62,0:41:63.21:0,63,2056	1/1:1,4:4:9.03:187,9,0	./.	./.	0/0:9,2:2:0:0,0,0	1/1:2,15:7:6.02:148,6,0	./.	./.	0/0:5,24:8:2.04:0,2,6	1/1:9,13:12:30.04:633,30,0	1/1:8,5:6:9.03:221,9,0	0/0:21,0:15:29.99:0,30,1086	0/0:22,0:21:42.13:0,42,1340	0/0:22,0:21:48.12:0,48,1536	1/1:3,17:14:18.06:443,18,0	1/1:3,9:7:3.01:74,3,0	0/0:34,11:5:3.01:0,3,110	1/1:12,6:5:6.02:148,6,0	0/1:8,14:3:12.94:39,0,13	./.	0/0:72,0:20:36.11:0,36,917	0/0:12,0:8:6.02:0,6,218	0/0:10,0:6:6.02:0,6,219	0/0:19,0:13:15.05:0,15,484	./.	0/0:31,0:21:63.22:0,63,2173	0/0:17,0:15:24.08:0,24,872	0/0:10,0:3:6.02:0,6,152
chr10	7581822	.	TATTATTATTATC	T	1846.14	PASS	AB=1.000;AC=30;AF=0.625;AN=48;BaseQRankSum=-2.834;DP=153;FS=0.000;HRun=0;HaplotypeScore=57.1941;InbreedingCoeff=0.1936;MQ=56.47;MQ0=0;MQRankSum=-0.829;QD=14.42;ReadPosRankSum=-3.167;VQSLOD=0.7669;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:11.72:0,12,68	1/1:2,0:2:6.01:60,6,0	./.	0/1:3,0:2:0.15:2,0,0	1/1:5,0:4:9.86:82,10,0	1/1:2,7:9:12.04:431,12,0	1/1:1,4:5:6.02:214,6,0	1/1:26,0:26:17.43:303,17,0	1/1:2,3:5:6.02:162,6,0	./.	./.	0/0:1,0:1:2.99:0,3,24	0/0:1,0:1:3:0,3,28	0/0:3,0:3:3:0,3,28	1/1:3,0:3:3.01:30,3,0	0/1:2,0:2:18.98:19,0,20	1/1:8,0:8:20.79:179,21,0	1/1:12,0:12:6.01:57,6,0	1/1:7,0:7:14.97:126,15,0	1/1:4,1:5:2.90:108,3,0	0/1:3,0:3:40.95:41,0,139	0/0:1,0:1:3:0,3,28	./.	0/0:1,0:1:3.01:0,3,50	1/1:1,0:1:3:28,3,0	0/1:6,0:6:36.92:37,0,366	0/1:13,0:12:19.07:19,0,1109	0/1:13,0:13:94.52:95,0,503
chr10	7582238	.	A	AGTGTGTGTGTGT	12721.22	PASS	AB=1.000;AC=48;AF=0.889;AN=54;BaseQRankSum=-0.647;DP=587;FS=2.905;HRun=0;HaplotypeScore=233.3594;InbreedingCoeff=0.4149;MQ=55.44;MQ0=16;MQRankSum=0.693;QD=24.46;ReadPosRankSum=3.552;VQSLOD=4.0530;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:24:3.01:54,3,0	1/1:7,0:7:3.01:64,3,0	0/0:36,0:16:12.02:0,12,176	0/0:21,0:16:2.38:0,2,243	0/1:21,0:21:7.99:111,0,8	1/1:20,0:20:8.54:311,9,0	1/1:19,0:18:13.90:433,14,0	1/1:23,0:22:27.07:588,27,0	1/1:26,0:24:27.02:451,27,0	1/1:30,0:29:45.89:1257,46,0	./.	1/1:10,11:21:18.06:997,18,0	1/1:7,11:21:10.28:470,10,0	1/1:15,9:28:30.57:1566,31,0	1/1:18,0:17:3.01:86,3,0	1/1:12,0:12:6.49:161,6,0	1/1:16,0:16:15.05:391,15,0	1/1:15,0:15:15:319,15,0	1/1:15,0:15:18.06:534,18,0	1/1:23,0:23:5.74:166,6,0	0/1:21,0:19:0:0,0,0	1/1:14,17:35:23.08:1153,23,0	1/1:17,0:16:5.78:238,6,0	1/1:18,11:31:14.31:638,14,0	1/1:17,0:15:7.81:76,8,0	1/1:24,0:22:60.18:1681,60,0	1/1:19,0:18:17.95:666,18,0	1/1:12,0:11:12:313,12,0
chr10	7582564	.	A	AT	10054.37	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-6.980;DP=564;FS=3.244;HRun=4;HaplotypeScore=59.6198;InbreedingCoeff=0.9982;MQ=92.03;MQ0=0;MQRankSum=-1.559;QD=35.40;ReadPosRankSum=-1.350;VQSLOD=4.8555;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:81.23:0,81,918	1/1:1,10:11:33.11:451,33,0	0/0:24,0:23:51.14:0,51,576	0/0:24,0:25:57.99:0,58,609	1/1:0,18:18:51.08:673,51,0	1/1:0,18:18:51.17:698,51,0	1/1:0,12:12:30.10:410,30,0	1/1:2,32:34:96.29:1281,96,0	1/1:3,9:12:24.08:328,24,0	1/1:4,25:29:75.21:975,75,0	1/1:2,8:10:17.97:221,18,0	0/0:18,0:18:51.15:0,51,579	0/0:12,0:12:36.10:0,36,408	0/0:16,0:16:45.13:0,45,510	1/1:0,15:15:45.15:616,45,0	1/1:0,14:14:36.12:493,36,0	1/1:0,20:20:60.20:820,60,0	1/1:0,10:10:27.09:369,27,0	1/1:2,22:24:66.18:856,66,0	1/1:3,33:36:96.15:1228,96,0	0/0:22,0:22:60.17:0,60,681	0/0:28,0:28:69.15:0,69,768	0/0:20,0:20:54.15:0,54,612	0/0:23,0:23:63.18:0,63,714	1/1:0,21:20:48.12:635,48,0	0/0:32,0:32:93.26:0,93,1055	0/0:20,0:19:51.14:0,51,578	0/0:10,0:10:30.09:0,30,340
chr10	7582706	.	G	GA	9157.03	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-9.576;DP=579;FS=0.737;HRun=9;HaplotypeScore=100.1664;InbreedingCoeff=0.9879;MQ=74.02;MQ0=0;MQRankSum=-0.836;QD=24.42;ReadPosRankSum=1.689;VQSLOD=4.8406;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:35:79.38:0,79,813	1/1:2,15:17:42.10:456,42,0	0/0:26,0:26:33.07:0,33,352	0/0:14,0:14:10.91:0,11,186	1/1:6,33:39:43.13:899,43,0	0/0:21,0:21:56.97:0,57,495	0/0:20,0:20:53.92:0,54,456	1/1:1,25:26:72.18:787,72,0	0/0:20,0:20:50.99:0,51,442	1/1:3,22:25:66.15:719,66,0	1/1:4,23:27:60.09:634,60,0	1/1:2,13:15:33.09:362,33,0	1/1:1,11:12:27.07:296,27,0	1/1:5,17:22:13.05:371,13,0	1/1:4,15:18:16.02:392,16,0	1/1:3,12:15:30.08:332,30,0	0/0:18,0:18:47.21:0,47,410	1/1:2,10:12:27.07:299,27,0	0/0:12,0:12:29.98:0,30,260	0/0:20,0:20:41.96:0,42,364	1/1:0,20:20:48.13:531,48,0	1/1:4,13:17:33.09:365,33,0	1/1:9,13:22:36.10:398,36,0	1/1:1,18:20:47.19:558,47,0	0/0:18,0:18:44.98:0,45,391	1/1:5,20:25:60.16:663,60,0	1/1:2,24:26:69.19:763,69,0	1/1:1,15:16:30.08:332,30,0
chr10	7583385	.	AT	A	2457.41	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=3.928;DP=696;FS=0.435;HRun=5;HaplotypeScore=118.0658;InbreedingCoeff=0.9997;MQ=79.06;MQ0=0;MQRankSum=-1.626;QD=28.57;ReadPosRankSum=1.846;VQSLOD=2.7298;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:99:0,99,1353	0/0:25,0:25:75.22:0,75,1007	0/0:19,0:19:51.13:0,51,626	0/0:20,0:20:43.81:0,44,622	0/0:50,0:50:99:0,147,1962	0/0:33,0:33:93.29:0,93,1254	0/0:20,0:20:60.20:0,60,821	0/0:28,0:28:66.21:0,66,889	0/0:23,0:23:66.21:0,66,886	0/0:19,0:19:54.18:0,54,738	0/0:25,0:25:69.22:0,69,929	0/0:22,0:22:63.17:0,63,826	0/0:27,0:27:78.25:0,78,1050	0/0:30,0:30:84.24:0,84,1088	0/0:18,0:18:54.18:0,54,739	0/0:19,0:19:51.14:0,51,665	0/0:19,0:19:54.10:0,54,683	0/0:16,0:16:48.15:0,48,640	0/0:16,0:16:45.10:0,45,593	0/0:39,0:39:99:0,117,1600	1/1:1,16:17:45.13:510,45,0	0/0:35,0:35:96.29:0,96,1281	0/0:32,0:32:96.29:0,96,1280	0/0:26,0:26:72.24:0,72,980	0/0:16,0:16:45.15:0,45,616	1/1:3,25:28:75.17:821,75,0	1/1:2,30:32:87.24:981,87,0	1/1:0,9:9:27.08:306,27,0
chr10	7583842	.	C	CTG	1835.35	PASS	AB=0.898;AC=44;AF=0.815;AN=54;BaseQRankSum=1.462;DP=671;FS=0.000;HRun=0;HaplotypeScore=174.8300;InbreedingCoeff=0.0370;MQ=68.01;MQ0=7;MQRankSum=-0.492;QD=3.17;ReadPosRankSum=-0.037;VQSLOD=2.4430;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:57,0:57:41.89:376,42,0	1/1:10,0:10:5.99:50,6,0	0/0:38,0:29:0:0,0,0	./.	1/1:20,0:19:2.99:24,3,0	1/1:26,0:26:5.69:53,6,0	1/1:38,0:38:7.46:71,7,0	1/1:37,0:37:36.87:233,37,0	1/1:23,0:22:5.88:54,6,0	1/1:25,0:25:12:104,12,0	1/1:16,0:16:2.95:22,3,0	0/1:19,0:19:0:0,0,0	1/1:22,0:22:20.88:180,21,0	0/1:20,0:20:0:0,0,0	1/1:16,0:15:2.99:24,3,0	0/0:26,0:24:0.31:0,0,1	1/1:15,0:15:2.50:9,2,0	1/1:17,0:16:8.94:66,9,0	1/1:18,0:17:3.47:27,3,0	1/1:27,0:27:2.22:7,2,0	0/1:20,11:30:23.58:80,0,24	1/1:18,0:16:5.98:48,6,0	1/1:22,0:19:8.97:69,9,0	1/1:33,0:31:2.99:24,3,0	1/1:15,0:15:8.98:73,9,0	0/1:19,1:20:47.31:78,0,47	0/1:13,10:23:44.18:202,0,44	0/1:11,0:11:23.61:72,0,24
chr10	7583860	.	G	GTA	848.93	PASS	AB=0.966;AC=12;AF=0.214;AN=56;BaseQRankSum=-2.157;DP=689;FS=6.425;HRun=0;HaplotypeScore=152.4269;InbreedingCoeff=-0.2379;MQ=46.61;MQ0=21;MQRankSum=1.634;QD=3.25;ReadPosRankSum=4.601;VQSLOD=1.7967;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:58:15.49:0,15,353	0/1:11,0:11:44.40:117,0,44	0/0:33,0:10:23.52:0,24,214	0/0:39,0:10:23.48:0,23,200	0/1:24,0:22:8.43:8,0,77	0/0:24,0:24:7.30:0,7,142	0/0:33,0:32:44.45:0,44,351	0/1:33,0:33:99:193,0,291	0/1:23,0:21:1.15:1,0,146	0/1:22,0:22:99:201,0,124	0/1:21,0:21:45.13:90,0,45	0/0:19,0:19:17.86:0,18,147	0/0:17,0:17:21.69:0,22,121	0/0:20,0:20:14.84:0,15,114	0/1:18,0:17:30.99:84,0,31	0/1:29,0:27:13.91:188,0,14	0/0:19,0:19:29.47:0,29,196	0/1:5,12:16:13.61:48,0,14	0/0:17,0:16:42.55:0,43,317	0/0:28,0:28:10.26:0,10,216	0/1:27,0:26:7.42:7,0,204	0/0:22,0:19:15.33:0,15,124	0/0:19,0:16:7.16:0,7,103	0/0:38,0:36:44.19:0,44,360	0/0:21,0:21:23.82:0,24,217	0/0:21,0:21:21.21:0,21,440	0/1:24,0:24:48.48:48,0,298	0/1:12,0:11:0.06:0,0,200
chr10	7584341	.	C	CCT	17074.49	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-0.721;DP=578;FS=14.898;HRun=0;HaplotypeScore=129.5850;InbreedingCoeff=0.9329;MQ=63.04;MQ0=4;MQRankSum=-3.381;QD=36.80;ReadPosRankSum=5.629;VQSLOD=5.6258;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:90.14:0,90,1140	1/1:0,10:10:24.08:432,24,0	0/0:38,0:29:62.59:0,63,857	0/0:33,0:22:50.26:0,50,677	1/1:0,29:29:57.19:1021,57,0	1/1:7,13:20:42.10:669,42,0	1/1:0,11:11:18.06:324,18,0	1/1:2,29:31:87.14:1283,87,0	1/1:3,12:15:33.10:564,33,0	1/1:10,18:27:81.09:1282,81,0	1/1:4,11:15:27.07:452,27,0	1/1:1,8:9:21.06:349,21,0	1/1:3,2:4:11.99:174,12,0	1/1:7,8:15:39.09:612,39,0	1/1:1,23:24:39.13:702,39,0	1/1:2,11:13:33.05:558,33,0	1/1:6,7:13:27:417,27,0	1/1:1,20:21:51.17:916,51,0	1/1:16,10:26:74.93:1014,75,0	1/1:5,17:21:48.16:857,48,0	1/1:8,12:20:22.22:522,22,0	1/1:0,3:3:6.02:108,6,0	1/1:1,15:15:16.36:472,16,0	1/1:1,10:11:12.04:216,12,0	1/1:1,29:29:54.18:972,54,0	1/1:1,33:34:96.27:1601,96,0	1/1:5,18:23:54.15:910,54,0	1/1:5,15:20:36.12:647,36,0
chr10	7584368	.	ATG	A	721.03	PASS	AB=0.923;AC=3;AF=0.054;AN=56;BaseQRankSum=-6.382;DP=520;FS=2.778;HRun=0;HaplotypeScore=158.0602;InbreedingCoeff=0.3908;MQ=50.66;MQ0=26;MQRankSum=3.544;QD=11.63;ReadPosRankSum=0.495;VQSLOD=3.5109;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,39:49:65.94:808,66,0	0/0:7,0:7:18.06:0,18,292	0/0:33,0:14:15:0,15,165	0/0:32,0:13:1.78:0,2,108	0/0:25,0:25:2.27:0,2,371	0/0:15,0:15:24.05:0,24,343	0/0:17,0:14:14.55:0,15,196	0/0:40,0:32:74.72:0,75,1101	0/0:12,0:12:27.07:0,27,412	0/0:25,0:21:51.17:0,51,808	0/0:11,0:10:11.91:0,12,164	0/0:8,0:8:12.04:0,12,199	0/0:3,0:3:8.90:0,9,115	0/0:9,0:8:15.05:0,15,240	0/0:19,0:19:33.11:0,33,539	0/0:12,0:11:18.06:0,18,287	0/0:11,0:11:24.08:0,24,398	0/0:22,0:22:44.36:0,44,849	0/0:17,0:16:24.04:0,24,347	0/0:18,0:18:29.96:0,30,492	0/0:23,0:19:18.06:0,18,296	0/0:2,0:2:6.02:0,6,100	0/0:14,0:14:27.08:0,27,424	0/0:15,0:15:6.02:0,6,95	0/0:24,0:24:45.13:0,45,716	0/0:27,0:26:63.18:0,63,958	0/0:17,0:17:33.08:0,33,519	0/1:11,1:12:16.70:17,0,271
chr10	7584407	.	TGA	T	73.57	PASS	AB=0.994;AC=15;AF=0.268;AN=56;BaseQRankSum=1.996;DP=451;FS=2.228;HRun=0;HaplotypeScore=178.7276;InbreedingCoeff=-0.1568;MQ=41.67;MQ0=31;MQRankSum=-1.766;QD=0.33;ReadPosRankSum=-2.031;VQSLOD=2.7521;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:39:90.27:0,90,1640	0/0:6,0:6:11.86:0,12,85	0/0:14,0:6:14.92:0,15,146	0/1:13,0:9:15.86:16,0,331	0/0:17,1:18:7.79:0,8,76	0/1:13,0:13:9.35:9,0,40	0/0:16,0:13:4.48:0,4,30	0/1:28,2:16:24.19:24,0,197	0/0:12,0:12:8.36:0,8,46	0/0:23,0:19:8.14:0,8,335	0/0:11,0:11:2.09:0,2,17	0/0:9,0:9:0.26:0,0,19	0/1:8,0:8:12.35:13,0,12	0/0:13,0:11:0.90:0,1,24	0/1:18,0:18:13.75:14,0,37	0/1:15,0:14:11.27:11,0,36	0/0:13,0:13:14.50:0,14,137	0/1:16,0:16:12.77:13,0,193	0/1:16,0:16:49.68:50,0,133	0/1:23,0:22:1.89:2,0,44	1/1:23,0:18:1.72:4,2,0	0/0:3,0:3:3:0,3,26	0/1:13,0:13:8.30:8,0,73	0/0:12,0:12:0:0,0,0	0/0:19,1:20:3.44:0,3,79	0/0:20,0:19:23.90:0,24,427	0/1:25,0:25:21.31:21,0,165	1/1:6,0:6:5.42:25,5,0
chr10	7584409	.	A	AGT	2792.13	PASS	AB=0.879;AC=39;AF=0.722;AN=54;BaseQRankSum=4.299;DP=453;FS=3.275;HRun=0;HaplotypeScore=177.8923;InbreedingCoeff=0.4295;MQ=41.55;MQ0=31;MQRankSum=-2.966;QD=8.14;ReadPosRankSum=0.266;VQSLOD=3.0697;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:39:81.26:0,81,1074	1/1:6,0:6:3.01:33,3,0	0/0:16,0:8:14.20:0,14,139	0/0:14,0:9:4.93:0,5,260	1/1:20,0:20:8.99:100,9,0	1/1:11,0:11:9.03:109,9,0	0/0:16,0:13:1.79:0,2,4	0/1:31,0:17:17.81:232,0,18	1/1:11,0:11:6.02:66,6,0	0/1:23,0:19:1.31:274,0,1	0/0:11,0:11:0.89:0,1,2	1/1:9,0:9:2.99:39,3,0	1/1:8,0:8:12.04:146,12,0	1/1:13,0:11:8.94:121,9,0	1/1:18,0:18:8.98:97,9,0	1/1:14,0:13:3.01:31,3,0	1/1:13,0:13:6.02:80,6,0	1/1:16,0:16:22.69:255,23,0	1/1:16,0:16:39.12:462,39,0	1/1:23,0:22:11.74:110,12,0	0/1:24,0:19:0.07:0,0,0	0/1:2,1:3:0:0,0,0	1/1:11,0:11:8.99:79,9,0	./.	1/1:20,0:20:9:90,9,0	1/1:21,0:20:24.07:289,24,0	1/1:23,0:23:23.98:253,24,0	0/1:4,4:9:3.46:64,0,3
chr10	7584412	.	G	GTA	4628.95	PASS	AB=0.769;AC=35;AF=0.648;AN=54;BaseQRankSum=-1.059;DP=459;FS=7.537;HRun=0;HaplotypeScore=169.5563;InbreedingCoeff=0.1358;MQ=42.38;MQ0=30;MQRankSum=-2.706;QD=13.57;ReadPosRankSum=2.803;VQSLOD=4.4430;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:40:93.21:0,93,1328	1/1:3,2:5:3.01:58,3,0	0/0:20,0:11:21.03:0,21,245	0/0:17,0:13:26.52:0,27,405	1/1:11,6:17:11.98:196,12,0	1/1:2,10:12:9.03:165,9,0	0/0:12,4:13:1.55:0,2,4	0/1:27,4:18:99:470,0,112	1/1:3,8:11:8.62:126,9,0	0/1:15,8:19:99:436,0,102	0/0:4,7:11:2.74:0,3,12	1/1:4,5:9:2.99:57,3,0	1/1:3,5:8:1.38:211,1,0	1/1:4,9:11:8.95:169,9,0	1/1:10,8:18:11.98:177,12,0	1/1:5,8:12:3:50,3,0	0/1:7,7:14:22.79:117,0,23	0/1:14,2:16:40.88:347,0,41	1/1:4,14:18:0.79:751,1,0	1/1:8,16:23:7.78:151,8,0	0/1:10,13:19:0.20:0,0,1	0/1:1,1:2:0:0,0,0	0/1:7,2:9:9.95:95,0,10	./.	1/1:11,8:19:7.07:134,7,0	0/1:16,6:21:94.79:433,0,95	1/1:8,15:23:9.25:386,9,0	0/1:8,2:10:13.06:99,0,13
chr10	7585028	.	TACAC	T	1177.04	PASS	AB=0.759;AC=21;AF=0.438;AN=48;BaseQRankSum=0.617;DP=421;FS=1.200;HRun=0;HaplotypeScore=102.4422;InbreedingCoeff=0.4145;MQ=65.96;MQ0=9;MQRankSum=-0.951;QD=6.92;ReadPosRankSum=1.608;VQSLOD=2.4920;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:21:0:0,0,0	./.	./.	./.	1/1:14,2:16:6.02:94,6,0	0/0:21,0:17:3.88:0,4,28	0/0:12,0:23:21.07:0,21,381	1/1:15,2:15:3:36,3,0	0/0:15,0:18:6:0,6,75	0/1:10,5:16:99:238,0,109	1/1:10,2:12:6.02:94,6,0	0/0:7,0:7:3.01:0,3,67	0/0:12,0:12:6.02:0,6,120	0/0:14,0:14:6.02:0,6,132	1/1:7,3:11:15.04:209,15,0	1/1:9,3:12:15.02:204,15,0	0/0:11,0:13:12.04:0,12,252	0/1:8,3:10:42.27:155,0,42	0/0:10,0:10:6.02:0,6,113	0/0:9,0:11:2.41:0,2,10	1/1:20,0:21:3:25,3,0	./.	0/0:11,0:11:5.82:0,6,136	1/1:21,0:20:2.80:10,3,0	0/0:9,0:8:11.69:0,12,225	1/1:4,0:10:15.02:139,15,0	0/1:9,0:13:14.89:47,0,15	1/1:3,0:6:9.01:84,9,0
chr10	7585081	.	TACACACACAC	T	1296.35	PASS	AB=0.916;AC=11;AF=0.212;AN=52;BaseQRankSum=2.801;DP=552;FS=0.910;HRun=0;HaplotypeScore=154.8495;InbreedingCoeff=0.4775;MQ=40.95;MQ0=37;MQRankSum=-4.235;QD=10.80;ReadPosRankSum=-3.723;VQSLOD=1.7964;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:15:1.36:0,1,3	0/0:5,0:8:12.04:0,12,219	./.	0/0:84,0:9:2.04:0,2,6	0/0:8,0:12:5.36:0,5,91	0/1:18,0:17:17.89:77,0,18	0/1:19,3:21:5.51:281,0,6	0/0:12,0:11:3.01:0,3,72	1/1:20,3:22:18.04:467,18,0	0/0:22,0:24:33.11:0,33,730	0/0:6,0:8:8.36:0,8,145	0/0:11,0:9:11.37:0,11,340	0/0:15,0:14:21.07:0,21,767	0/0:10,0:15:21.54:0,22,834	0/0:14,0:16:15.05:0,15,550	0/1:11,0:13:9.26:9,0,243	1/1:15,0:14:3.01:39,3,0	0/0:9,0:9:9:0,9,236	./.	1/1:12,4:15:10.34:147,10,0	0/0:31,0:29:17.99:0,18,678	0/0:12,0:12:18.06:0,18,730	0/0:8,0:8:5.12:0,5,211	0/0:23,0:21:23.67:0,24,1035	1/1:5,6:12:15.94:426,16,0	0/0:20,0:19:24.97:0,25,782	0/0:14,0:14:21.03:0,21,599	0/0:7,0:5:6.02:0,6,261
chr10	7586804	.	CT	C	3060.08	PASS	AB=0.882;AC=17;AF=0.304;AN=56;BaseQRankSum=1.158;DP=632;FS=1.163;HRun=12;HaplotypeScore=80.5620;InbreedingCoeff=0.9199;MQ=71.42;MQ0=0;MQRankSum=-0.741;QD=14.57;ReadPosRankSum=2.263;VQSLOD=4.4668;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:46:88.62:0,89,566	1/1:1,11:12:29.88:232,30,0	0/1:13,1:15:5.74:6,0,101	0/0:12,0:11:9.69:0,10,44	0/0:3,0:16:37.44:0,37,211	1/1:4,22:26:53.77:418,54,0	1/1:5,24:29:65.72:511,66,0	0/0:12,0:24:36.19:0,36,229	1/1:1,14:15:41.83:323,42,0	0/0:7,0:23:50.43:0,50,312	0/0:5,0:15:25.98:0,26,149	0/0:22,3:25:22.70:0,23,575	0/0:20,1:21:21.83:0,22,391	0/0:21,0:24:53.86:0,54,492	0/0:6,0:20:40.34:0,40,237	0/0:3,0:19:31.38:0,31,164	1/1:4,27:32:40.33:486,40,0	0/0:5,0:20:34.46:0,34,190	1/1:10,20:30:59.70:464,60,0	1/1:5,22:27:29.29:409,29,0	0/0:24,0:24:54.58:0,55,549	0/0:18,0:18:30.06:0,30,305	0/0:18,2:20:18.44:0,18,352	0/0:28,0:27:77.97:0,78,768	1/1:5,19:24:53.76:418,54,0	0/0:17,2:19:15.67:0,16,326	0/0:27,1:28:43.77:0,44,611	0/0:19,0:19:46.30:0,46,441
chr10	7586891	.	TCTC	T	1500.56	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.912;DP=616;FS=6.833;HRun=0;HaplotypeScore=93.8641;InbreedingCoeff=0.9969;MQ=93.82;MQ0=0;MQRankSum=-4.608;QD=39.49;ReadPosRankSum=2.628;VQSLOD=4.8619;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,37:38:99:1595,100,0	0/0:10,0:10:30.10:0,30,678	0/0:36,0:36:89.86:0,90,1588	0/0:30,0:30:78.26:0,78,1669	0/0:17,0:17:51.17:0,51,1116	0/0:18,0:18:45.15:0,45,1020	0/0:24,0:24:66.20:0,66,1365	0/0:22,0:22:63.22:0,63,1362	0/0:15,0:15:45.15:0,45,981	0/0:28,0:28:84.26:0,84,1858	0/0:13,0:13:30.10:0,30,679	0/0:14,0:14:42.14:0,42,950	0/0:23,0:23:66.23:0,66,1489	0/0:20,0:20:60.21:0,60,1341	0/0:21,0:21:57.15:0,57,1241	0/0:24,0:24:63.22:0,63,1428	0/0:30,0:30:72.25:0,72,1574	0/0:22,0:22:63.22:0,63,1418	0/0:18,0:18:54.19:0,54,1202	0/0:23,0:23:63.22:0,63,1425	0/0:24,0:24:69.24:0,69,1563	0/0:22,0:22:63.20:0,63,1385	0/0:20,0:20:57.20:0,57,1244	0/0:24,0:23:72.20:0,72,1526	0/0:20,0:20:51.17:0,51,1132	0/0:31,0:31:90.31:0,90,2039	0/0:21,0:21:54.17:0,54,1167	0/0:8,0:8:24.08:0,24,541
chr10	7587418	.	A	AG	807.02	PASS	AC=18;AF=0.333;AN=54;BaseQRankSum=-0.624;DP=384;FS=21.946;HRun=1;HaplotypeScore=53.3152;InbreedingCoeff=0.9056;MQ=58.97;MQ0=1;MQRankSum=3.365;QD=14.41;ReadPosRankSum=-0.390;VQSLOD=1.4359;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:21.27:0,21,113	0/0:5,0:5:14.90:0,15,115	0/0:23,0:12:15.10:0,15,284	0/0:9,0:5:11.79:0,12,103	0/0:21,0:21:39.43:0,39,319	0/0:14,0:14:37.56:0,38,247	0/0:21,0:19:33.29:0,33,237	0/0:29,0:29:77.12:0,77,674	0/0:7,0:7:10.49:0,10,75	0/0:17,0:17:40.78:0,41,377	0/0:18,0:18:40.01:0,40,388	1/1:7,0:6:14.97:121,15,0	1/1:3,0:3:8.94:66,9,0	1/1:3,0:3:5.87:39,6,0	0/0:18,0:18:43.14:0,43,398	0/0:22,0:22:49.67:0,50,447	0/0:16,0:16:20.69:0,21,157	0/0:18,0:18:41.39:0,41,347	0/0:14,0:13:35.79:0,36,274	0/0:17,0:14:35.43:0,35,243	1/1:12,0:12:30.08:237,30,0	1/1:5,0:5:14.97:123,15,0	1/1:0,2:2:3.01:40,3,0	1/1:5,0:5:8.97:70,9,0	0/0:16,0:13:27.15:0,27,164	1/1:12,1:13:15.29:141,15,0	./.	1/1:6,0:6:15.01:168,15,0
chr10	7587419	.	G	GT	1351.81	PASS	AB=0.944;AC=44;AF=0.786;AN=56;BaseQRankSum=4.666;DP=455;FS=8.635;HRun=16;HaplotypeScore=110.7216;InbreedingCoeff=0.1641;MQ=54.98;MQ0=1;MQRankSum=-4.033;QD=3.21;ReadPosRankSum=-0.961;VQSLOD=0.1517;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:28:11.13:55,11,0	1/1:9,0:9:11.50:59,12,0	0/0:24,0:13:5.51:0,6,30	0/0:10,0:5:2.26:0,2,8	1/1:14,8:23:6.34:123,6,0	1/1:19,0:19:13.11:68,13,0	1/1:27,0:23:20.56:103,21,0	0/1:28,2:30:44.63:52,0,45	1/1:9,0:9:15.72:83,16,0	0/1:16,1:17:16.76:17,0,35	0/1:16,3:19:9.77:10,0,52	1/1:7,0:6:0.47:1,0,0	0/1:3,0:3:0:0,0,0	1/1:3,0:3:0.47:1,0,0	0/1:17,1:18:23.90:24,0,53	0/1:22,1:23:31.04:31,0,38	1/1:23,0:22:18.64:106,19,0	0/1:15,2:18:33.68:39,0,34	1/1:16,0:15:8.65:46,9,0	1/1:19,0:16:6.50:29,6,0	1/1:15,0:15:11.84:59,12,0	0/1:5,0:5:0:0,0,0	1/1:2,0:2:2.92:17,3,0	1/1:4,0:4:0.89:2,1,0	1/1:22,0:19:21.29:123,21,0	1/1:14,6:20:38.24:202,38,0	1/1:21,0:21:20.02:103,20,0	1/1:21,0:16:26.63:136,27,0
chr10	7587422	.	T	TTTTTTTTGTTTTTG	12367.83	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=8.181;DP=441;FS=22.591;HRun=0;HaplotypeScore=206.6598;InbreedingCoeff=0.2334;MQ=54.45;MQ0=1;MQRankSum=-11.225;QD=49.08;ReadPosRankSum=3.212;VQSLOD=2.8752;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:4,19:33:17.99:1103,18,0	1/1:8,0:8:18.01:837,18,0	0/0:23,0:12:20.35:0,20,229	0/0:11,0:5:6:0,6,72	0/0:23,0:23:56.87:0,57,597	1/1:19,0:19:8.93:1610,9,0	0/1:26,0:22:44.85:1132,0,45	0/0:27,0:27:63.71:0,64,770	0/1:7,0:7:8.28:758,0,8	0/0:18,0:18:45.03:0,45,617	0/0:19,0:19:43.15:0,43,667	0/0:5,0:4:2.04:0,2,6	0/1:2,0:2:20.72:112,0,21	0/1:3,0:3:0.53:131,0,1	0/0:15,0:15:34.99:0,35,858	0/0:24,0:24:0.89:0,1,746	0/1:22,0:21:23.46:952,0,23	0/0:17,0:17:41.99:0,42,752	0/1:14,0:13:17.92:836,0,18	1/1:17,0:14:34.62:1237,35,0	0/1:13,0:13:32.87:374,0,33	0/0:5,0:5:9.01:0,9,83	0/0:2,0:2:2.68:0,3,11	1/1:5,0:5:3.40:85,3,0	1/1:22,0:19:3.42:1558,3,0	0/1:20,0:20:37.07:767,0,37	1/1:20,0:20:21.53:514,22,0	0/1:20,0:15:24.39:361,0,24
chr10	7588296	.	A	AC	3539.60	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-11.275;DP=660;FS=0.874;HRun=3;HaplotypeScore=61.7342;InbreedingCoeff=0.9860;MQ=64.23;MQ0=0;MQRankSum=-0.301;QD=36.87;ReadPosRankSum=1.792;VQSLOD=4.2507;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:75.20:0,75,876	0/0:11,0:11:30.08:0,30,349	0/0:14,0:14:33.56:0,34,380	0/0:13,0:11:14.97:0,15,177	0/0:38,0:38:99:0,108,1296	0/0:24,0:24:69.18:0,69,795	0/0:27,0:27:78.23:0,78,925	0/0:20,0:20:57.17:0,57,683	0/0:34,0:34:99:0,102,1211	0/0:31,0:31:84.23:0,84,986	0/0:23,0:23:63.19:0,63,747	0/0:27,0:27:78.23:0,78,924	0/0:27,0:27:75.22:0,75,887	0/0:16,0:16:48.15:0,48,576	0/0:21,0:21:60.14:0,60,684	0/0:28,0:28:84.25:0,84,997	0/0:27,0:27:72.17:0,72,826	0/0:15,0:15:42.13:0,42,499	0/0:10,0:10:24.06:0,24,278	0/0:34,0:34:93.22:0,93,1079	1/1:1,25:26:72.24:1008,72,0	0/0:21,0:21:57.17:0,57,684	0/0:34,0:34:99:0,99,1179	0/0:14,0:14:42.13:0,42,503	0/0:29,0:29:87.22:0,87,1011	1/1:2,33:35:33.77:1315,34,0	1/1:0,28:28:75.11:1049,75,0	1/1:2,5:7:12.04:168,12,0
chr10	7588812	.	A	AAACT	4084.38	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-9.784;DP=549;FS=0.526;HRun=0;HaplotypeScore=83.3769;InbreedingCoeff=0.9919;MQ=65.25;MQ0=0;MQRankSum=-1.231;QD=52.36;ReadPosRankSum=0.925;VQSLOD=4.6599;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:78.25:0,78,1282	0/0:7,0:7:21.07:0,21,353	0/0:7,0:6:15.04:0,15,215	0/0:12,0:12:24.06:0,24,361	0/0:18,0:18:38.72:0,39,614	0/0:16,0:16:33.11:0,33,554	0/0:16,0:16:42.13:0,42,672	0/0:31,0:31:72.23:0,72,1149	0/0:19,0:19:39.13:0,39,647	0/0:23,0:23:66.23:0,66,1101	0/0:27,0:27:66.23:0,66,1100	0/0:14,0:14:36.12:0,36,576	0/0:15,0:15:36.11:0,36,581	0/0:20,0:20:54.15:0,54,871	0/0:19,0:19:51.17:0,51,844	0/0:18,0:18:39.13:0,39,654	0/0:24,0:24:63.21:0,63,1047	0/0:15,0:15:36.12:0,36,598	0/0:28,0:28:60.17:0,60,923	0/0:26,0:26:66.21:0,66,1083	1/1:2,9:11:24.08:594,24,0	0/0:21,0:21:54.18:0,54,898	0/0:23,0:23:57.17:0,57,901	0/0:10,0:10:24.06:0,24,377	0/0:31,0:31:87.29:0,87,1436	1/1:5,21:26:38.25:1490,38,0	1/1:10,20:30:57.17:1408,57,0	1/1:0,11:11:24.08:594,24,0
chr10	7590062	.	A	AC	6168.81	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-6.455;DP=701;FS=4.385;HRun=6;HaplotypeScore=81.2714;InbreedingCoeff=0.9943;MQ=80.74;MQ0=0;MQRankSum=-1.792;QD=31.63;ReadPosRankSum=-1.097;VQSLOD=4.8086;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,33:36:93.30:1170,93,0	0/0:12,0:12:27.06:0,27,275	0/0:23,0:23:59.58:0,60,577	0/0:17,0:17:35.49:0,35,352	1/1:3,17:20:45.14:565,45,0	0/0:20,0:20:57.13:0,57,582	0/0:27,0:27:72.13:0,72,720	1/1:4,22:26:66.16:811,66,0	0/0:23,0:23:63.12:0,63,635	1/1:1,26:27:78.25:981,78,0	1/1:1,10:11:24.08:302,24,0	0/0:27,0:27:81.18:0,81,825	0/0:29,0:29:81.03:0,81,786	0/0:35,0:35:90.20:0,90,918	1/1:4,18:22:42.13:528,42,0	1/1:0,13:13:39.12:490,39,0	0/0:35,0:35:99:0,99,1001	1/1:3,37:40:99:1321,105,0	0/0:21,0:21:54.01:0,54,536	0/0:34,0:34:96.20:0,96,971	0/0:50,0:50:99:0,135,1370	0/0:30,0:30:87.19:0,87,887	0/0:13,0:13:36.08:0,36,367	0/0:37,0:37:99:0,99,981	0/0:15,0:15:39.09:0,39,397	0/0:36,1:37:61.48:0,61,941	0/0:17,0:17:45.08:0,45,453	0/0:4,0:4:12.03:0,12,122
chr10	7590752	.	TG	T	7120.10	PASS	AB=1.000;AC=39;AF=0.696;AN=56;BaseQRankSum=5.657;DP=466;FS=7.175;HRun=9;HaplotypeScore=50.4706;InbreedingCoeff=0.9011;MQ=83.14;MQ0=0;MQRankSum=-1.266;QD=20.46;ReadPosRankSum=3.094;VQSLOD=5.4271;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:77.13:0,77,878	1/1:0,5:5:15.01:137,15,0	0/1:18,0:18:14.78:15,0,153	0/0:14,1:15:8.21:0,8,146	1/1:4,20:24:54.02:494,54,0	1/1:1,12:13:33.02:302,33,0	1/1:2,11:13:27.01:247,27,0	1/1:6,23:29:63.01:572,63,0	1/1:2,17:19:48.02:439,48,0	1/1:2,18:20:48.02:439,48,0	1/1:3,19:22:51.02:466,51,0	0/0:11,0:11:18.04:0,18,198	0/0:15,0:15:39.12:0,39,449	0/0:8,0:8:24.07:0,24,277	1/1:0,16:16:45.02:412,45,0	1/1:0,15:15:38.99:357,39,0	1/1:1,20:21:42.02:384,42,0	1/1:4,7:11:21:192,21,0	1/1:2,9:12:29.03:248,29,0	1/1:4,11:15:33.01:301,33,0	1/1:4,15:19:39.01:357,39,0	0/0:10,0:10:30.08:0,30,337	0/0:14,0:14:39.12:0,39,450	0/0:11,0:11:30.04:0,30,321	1/1:1,23:24:66.03:604,66,0	1/1:3,12:15:36:329,36,0	1/1:3,24:27:66.03:604,66,0	1/1:0,9:9:24.01:220,24,0
chr10	7592854	.	T	TGG	3583.32	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=8.869;DP=559;FS=0.000;HRun=8;HaplotypeScore=88.6867;InbreedingCoeff=0.9788;MQ=93.35;MQ0=0;MQRankSum=-3.640;QD=12.53;ReadPosRankSum=-0.516;VQSLOD=0.5024;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,27:33:65.71:1008,66,0	1/1:2,0:9:14.97:52,15,0	0/0:26,0:26:57.11:0,57,620	0/0:24,0:24:45.02:0,45,482	1/1:12,1:21:11.72:106,12,0	1/1:5,0:21:25.04:96,25,0	1/1:4,0:15:24.95:86,25,0	1/1:11,4:19:33.05:386,33,0	1/1:0,0:21:44.92:154,45,0	1/1:7,1:12:15:136,15,0	1/1:6,0:12:8.97:77,9,0	0/0:24,0:24:60.13:0,60,660	0/0:22,0:22:60.16:0,60,669	0/0:18,0:18:48.08:0,48,516	1/1:6,3:22:39.07:431,39,0	1/1:6,2:17:27.06:300,27,0	1/1:4,0:20:32.44:111,32,0	1/1:3,1:11:24.39:227,24,0	1/1:3,0:21:16.31:170,16,0	1/1:0,0:22:52.65:184,53,0	0/0:26,0:26:66.14:0,66,727	0/0:21,0:21:39.06:0,39,424	0/0:19,0:19:42.02:0,42,458	0/0:22,0:22:60.16:0,60,668	1/1:0,0:9:17.47:60,17,0	0/0:26,0:26:63.12:0,63,694	0/0:31,0:31:87.23:0,87,970	0/0:14,0:14:30.03:0,30,333
chr10	7593271	.	CTAT	C	6153.04	PASS	AC=40;AF=0.769;AN=52;BaseQRankSum=4.980;DP=334;FS=1.967;HRun=0;HaplotypeScore=58.3414;InbreedingCoeff=0.8375;MQ=67.15;MQ0=0;MQRankSum=-0.270;QD=21.82;ReadPosRankSum=0.093;VQSLOD=4.6087;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,7:11:18.06:253,18,0	1/1:3,2:5:3.01:42,3,0	./.	0/0:3,0:2:3.01:0,3,48	1/1:5,7:12:17.97:208,18,0	1/1:4,12:16:33.11:463,33,0	1/1:7,3:10:9.03:126,9,0	1/1:12,18:30:54.12:681,54,0	1/1:3,9:12:18.06:253,18,0	1/1:3,8:11:21.05:276,21,0	1/1:7,6:13:15.05:211,15,0	0/0:8,0:8:9.03:0,9,180	0/0:7,0:7:12.04:0,12,238	0/0:10,0:10:21.07:0,21,421	1/1:4,6:10:18.06:253,18,0	1/1:3,6:9:15.05:211,15,0	1/1:7,24:31:66.22:927,66,0	1/1:6,7:13:21.07:295,21,0	1/1:6,11:18:36.02:405,36,0	1/1:12,7:19:18.06:247,18,0	1/1:2,6:8:18.06:253,18,0	./.	0/0:7,0:13:9.48:0,9,103	0/0:2,0:3:6.02:0,6,100	1/1:4,7:11:15.05:211,15,0	1/1:5,7:12:21.07:292,21,0	1/1:3,9:12:21.07:295,21,0	1/1:6,13:19:18.06:253,18,0
chr10	7596939	.	G	GACACACACACACAC	7532.76	PASS	AB=0.865;AC=32;AF=0.615;AN=52;BaseQRankSum=2.453;DP=697;FS=3.287;HRun=0;HaplotypeScore=275.3727;InbreedingCoeff=0.7314;MQ=55.77;MQ0=9;MQRankSum=-8.051;QD=18.60;ReadPosRankSum=-6.825;VQSLOD=1.8188;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:40:66.07:0,66,1719	0/0:12,0:12:12.04:0,12,403	0/0:39,0:20:2.98:0,3,22	./.	1/1:23,2:25:0.37:0,1,0	0/0:18,0:20:30.57:0,31,985	0/1:22,0:24:8.62:9,0,1241	1/1:28,0:28:59.65:2261,60,0	0/0:21,0:21:42.12:0,42,1401	1/1:23,0:23:19.60:485,20,0	1/1:20,0:20:3.48:98,3,0	./.	1/1:15,0:20:12.51:451,13,0	1/1:27,0:26:9.03:125,9,0	1/1:20,2:23:12.04:682,12,0	1/1:17,3:21:24.17:1023,24,0	0/0:29,0:31:16.52:0,17,1939	1/1:12,0:12:6.61:285,7,0	0/0:22,0:26:24.06:0,24,679	0/0:23,0:26:30.07:0,30,837	1/1:42,0:42:9.50:206,9,0	1/1:32,0:31:5.96:183,6,0	1/1:21,0:19:6.01:71,6,0	0/1:17,3:25:0:0,0,0	0/0:19,0:19:36.07:0,36,975	1/1:25,0:30:41.58:1128,42,0	1/1:17,0:20:6.02:103,6,0	1/1:2,0:6:15.05:421,15,0
chr10	7597464	.	CTGTGTGTGTG	C	1248.50	PASS	AC=16;AF=0.400;AN=40;BaseQRankSum=4.630;DP=593;FS=0.000;HRun=0;HaplotypeScore=151.3840;InbreedingCoeff=0.6616;MQ=68.73;MQ0=18;MQRankSum=-5.184;QD=7.13;ReadPosRankSum=-0.498;VQSLOD=2.3699;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:0.47:0,0,1	./.	./.	./.	./.	1/1:17,7:24:3.01:88,3,0	0/0:17,0:17:0.89:0,1,2	0/0:34,0:34:0.47:0,0,1	1/1:14,5:18:9.50:266,10,0	./.	1/1:16,3:19:3.01:89,3,0	0/0:22,0:29:31.29:0,31,450	0/0:9,0:17:15.11:0,15,261	0/0:10,0:14:12.04:0,12,218	1/1:18,7:27:12.04:281,12,0	1/1:12,1:13:3.43:89,3,0	1/1:23,1:24:15.03:322,15,0	1/1:22,1:22:3.01:88,3,0	0/0:11,0:11:0:0,0,0	./.	0/0:35,0:32:24.08:0,24,724	./.	./.	0/0:26,0:33:27.56:0,28,469	1/1:18,5:22:6.02:165,6,0	0/0:16,0:15:16.61:0,17,523	0/0:18,0:18:27.08:0,27,962	0/0:13,0:14:6.02:0,6,187
chr10	7600459	.	AT	A	3913.76	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=0.686;DP=598;FS=0.746;HRun=8;HaplotypeScore=131.9896;InbreedingCoeff=0.9935;MQ=82.26;MQ0=0;MQRankSum=-2.072;QD=24.01;ReadPosRankSum=-1.130;VQSLOD=1.8393;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:72.10:0,72,804	0/0:14,0:14:42.11:0,42,491	0/0:22,0:22:48.03:0,48,512	0/0:16,0:16:35.10:0,35,353	1/1:3,24:27:68.05:642,68,0	0/0:19,0:19:54.10:0,54,610	0/0:17,0:17:48.12:0,48,559	1/1:9,24:33:72.02:671,72,0	0/0:20,0:20:60.10:0,60,666	1/1:1,33:34:95.93:921,96,0	1/1:1,12:13:36.06:348,36,0	0/0:20,0:20:60.15:0,60,691	0/0:17,0:17:45.14:0,45,540	0/0:17,0:17:48.14:0,48,567	1/1:2,18:20:54.08:521,54,0	1/1:2,15:17:39.06:377,39,0	0/0:28,0:28:81.23:0,81,960	1/1:1,18:19:45.07:435,45,0	0/0:18,0:18:51.09:0,51,564	0/0:32,0:32:93.23:0,93,1079	0/0:4,0:11:11.47:0,11,58	0/0:17,0:17:48.14:0,48,571	0/0:27,0:28:78.05:0,78,859	0/0:24,0:24:66.19:0,66,780	0/0:17,0:17:34.84:0,35,464	0/0:5,0:24:62.28:0,62,371	0/0:2,0:33:83.21:0,83,422	0/0:3,0:15:31.73:0,32,168
chr10	7601874	.	TCCCCATTCCTCAGAACCCCG	T	18056.37	PASS	AB=0.751;AC=26;AF=0.464;AN=56;BaseQRankSum=16.025;DP=531;FS=0.793;HRun=0;HaplotypeScore=290.3532;InbreedingCoeff=0.8448;MQ=74.55;MQ0=0;MQRankSum=-14.184;QD=69.72;ReadPosRankSum=3.404;VQSLOD=3.6855;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,117,7019	0/0:14,0:14:36.12:0,36,2249	0/0:14,0:13:36.09:0,36,1195	0/0:26,0:26:49.90:0,50,2354	1/1:2,23:25:45.07:1601,45,0	0/0:14,0:14:42.11:0,42,2444	0/0:25,0:24:72.22:0,72,3832	1/1:3,16:19:48.01:700,48,0	0/0:18,0:18:51.16:0,51,3630	1/1:2,19:21:42.14:1931,42,0	1/1:3,17:20:33.06:1554,33,0	1/1:0,19:19:38.92:2102,39,0	1/1:2,13:15:24.08:1341,24,0	1/1:0,14:14:24.55:1342,25,0	1/1:1,16:17:29.90:1663,30,0	0/1:3,15:18:99:1644,0,254	0/0:29,0:29:81.25:0,81,6598	1/1:1,16:17:15.05:800,15,0	0/0:17,0:17:42.13:0,42,2283	0/0:17,0:17:48.13:0,48,3410	0/0:24,0:24:63.18:0,63,3648	1/1:2,15:17:27.09:1408,27,0	1/1:2,16:18:27.04:1363,27,0	1/1:1,16:17:9.03:503,9,0	0/0:13,0:13:30.09:0,30,2264	0/1:21,1:22:99:105,0,3730	0/0:12,0:12:33.11:0,33,3103	0/0:8,0:8:24.03:0,24,1555
chr10	7602387	.	A	ATG	16725.22	PASS	AB=0.741;AC=41;AF=0.732;AN=56;BaseQRankSum=-6.836;DP=796;FS=2.515;HRun=0;HaplotypeScore=116.9564;InbreedingCoeff=0.7712;MQ=73.35;MQ0=0;MQRankSum=-2.493;QD=26.38;ReadPosRankSum=1.950;VQSLOD=5.7141;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:62.31:0,62,940	1/1:1,7:8:21.07:339,21,0	0/0:37,0:35:44.52:0,45,560	0/1:32,0:31:3.28:3,0,412	1/1:7,16:23:51.17:823,51,0	0/1:7,20:27:9.60:857,0,10	1/1:4,21:25:45.15:726,45,0	1/1:19,28:47:50.86:1294,51,0	1/1:2,18:20:51.17:823,51,0	0/1:17,20:37:6.61:879,0,7	1/1:6,23:30:57.18:896,57,0	1/1:8,0:31:50.88:456,51,0	1/1:6,2:33:68.21:606,68,0	1/1:1,0:28:71.19:609,71,0	1/1:7,26:33:66.23:1065,66,0	1/1:6,29:35:75.26:1210,75,0	1/1:7,22:29:60.04:934,60,0	1/1:5,15:20:8.75:641,9,0	1/1:3,17:21:51.17:823,51,0	1/1:8,31:39:81.28:1307,81,0	0/0:24,0:24:57.17:0,57,692	1/1:9,0:25:35.99:317,36,0	1/1:9,0:33:59.96:520,60,0	1/1:4,0:31:71.97:629,72,0	1/1:5,21:26:60.20:968,60,0	0/0:29,0:29:81.24:0,81,972	0/0:24,0:23:60.13:0,60,690	0/0:15,0:15:27.08:0,27,327
chr10	7603404	.	CT	C	3856.31	PASS	AB=0.699;AC=28;AF=0.500;AN=56;BaseQRankSum=-10.618;DP=727;FS=6.217;HRun=14;HaplotypeScore=98.5307;InbreedingCoeff=0.6946;MQ=69.58;MQ0=7;MQRankSum=1.640;QD=9.43;ReadPosRankSum=3.235;VQSLOD=3.0915;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:18,26:45:62.98:434,63,0	1/1:4,12:16:2.38:138,2,0	0/1:35,1:20:14.15:14,0,91	0/0:26,0:14:10.49:0,10,96	0/0:23,0:28:28.92:0,29,270	1/1:6,15:23:42.65:279,43,0	1/1:9,13:25:9.98:181,10,0	0/0:19,0:31:39.84:0,40,248	1/1:3,9:12:2.64:140,3,0	0/0:15,0:33:67.25:0,67,404	0/0:5,0:21:37.58:0,38,206	1/1:13,10:23:22.46:149,22,0	1/1:10,16:28:45.57:299,46,0	1/1:7,21:28:53.52:370,54,0	0/0:10,0:25:31.79:0,32,189	0/0:10,0:29:26.05:0,26,169	0/1:7,16:25:1.06:265,0,1	0/0:6,0:21:31.25:0,31,158	0/1:11,14:26:3.22:256,0,3	1/1:10,11:23:7.73:238,8,0	0/0:24,1:25:38.21:0,38,251	1/1:10,15:25:17.10:241,17,0	1/1:5,17:22:41.57:288,42,0	1/1:5,26:32:67.48:458,67,0	0/1:7,11:20:24.44:107,0,24	0/0:36,0:36:75.12:0,75,324	0/0:29,0:29:68.20:0,68,345	0/0:10,0:10:19.58:0,20,98
chr10	7604423	.	A	AC	11825.34	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=19.977;DP=690;FS=0.288;HRun=1;HaplotypeScore=180.4359;InbreedingCoeff=0.9970;MQ=74.27;MQ0=0;MQRankSum=-14.259;QD=32.22;ReadPosRankSum=3.192;VQSLOD=4.5014;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:56:99:0,168,2149	0/0:10,0:10:27.06:0,27,333	0/0:35,0:34:93.07:0,93,1133	0/0:34,0:33:84.18:0,84,1031	1/1:4,14:18:51.12:610,51,0	0/0:14,0:14:39.11:0,39,485	0/0:34,0:34:99:0,102,1295	1/1:5,11:16:45.06:513,45,0	0/0:23,0:23:69.22:0,69,895	1/1:2,20:22:63.13:736,63,0	1/1:3,6:9:21:220,21,0	1/1:2,19:21:60.65:740,61,0	1/1:3,26:28:66.19:808,66,0	1/1:1,22:23:66.20:821,66,0	1/1:5,18:23:66.16:793,66,0	1/1:2,14:16:45.59:551,46,0	0/0:45,0:45:99:0,126,1593	1/1:1,28:29:75.22:936,75,0	0/0:21,0:21:57.18:0,57,730	0/0:28,0:28:84.27:0,84,1090	1/1:7,25:32:68.78:862,69,0	1/1:2,21:23:66.20:809,66,0	1/1:1,19:22:60.15:719,60,0	1/1:6,29:35:63.04:1092,63,0	0/0:23,0:22:69.21:0,69,881	1/1:8,13:21:55.28:685,55,0	1/1:3,19:23:63.14:748,63,0	1/1:0,5:5:15.05:182,15,0
chr10	7604425	.	T	TG	10337.53	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=20.916;DP=659;FS=0.000;HRun=1;HaplotypeScore=176.3649;InbreedingCoeff=0.9969;MQ=76.07;MQ0=0;MQRankSum=-11.200;QD=30.58;ReadPosRankSum=4.060;VQSLOD=4.4583;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:58:99:0,168,2118	0/0:9,0:9:27.09:0,27,350	0/0:34,0:34:96.26:0,96,1166	0/0:32,0:31:81.22:0,81,1020	1/1:0,16:16:45.13:531,45,0	0/0:14,0:14:39.13:0,39,506	0/0:33,0:33:99:0,99,1270	1/1:0,12:14:35.86:382,36,0	0/0:23,0:23:66.21:0,66,857	1/1:4,19:23:60.11:634,60,0	1/1:1,6:7:20.84:200,21,0	1/1:0,20:20:60.16:685,60,0	1/1:2,20:21:60.11:660,60,0	1/1:2,22:24:69.15:766,69,0	1/1:3,19:22:60.61:674,61,0	1/1:0,15:15:45.13:528,45,0	0/0:43,0:43:99:0,126,1607	1/1:3,23:26:74.63:822,75,0	0/0:21,0:21:60.18:0,60,766	0/0:30,0:30:84.26:0,84,1076	1/1:3,26:30:66.48:726,66,0	1/1:3,21:24:65.89:730,66,0	1/1:3,17:20:55.02:586,55,0	1/1:3,31:34:58.06:1015,58,0	0/0:24,0:23:69.20:0,69,880	1/1:2,13:15:45.11:519,45,0	1/1:0,21:21:63.17:708,63,0	1/1:0,5:5:15.04:170,15,0
chr10	7604520	.	AACC	A	12674.81	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=19.510;DP=589;FS=2.615;HRun=0;HaplotypeScore=184.4465;InbreedingCoeff=0.9963;MQ=78.18;MQ0=0;MQRankSum=-19.112;QD=39.36;ReadPosRankSum=-0.711;VQSLOD=5.5006;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,111,2362	0/0:10,0:10:27.09:0,27,612	0/0:16,0:16:42.11:0,42,791	0/0:24,0:24:68.69:0,69,1362	1/1:5,26:31:81.17:1083,81,0	0/0:23,0:23:66.23:0,66,1440	0/0:28,0:28:84.29:0,84,1896	1/1:5,9:14:33.09:507,33,0	0/0:20,0:20:60.21:0,60,1324	1/1:9,17:26:72.17:1085,72,0	1/1:0,13:13:39.11:522,39,0	1/1:4,25:29:81.25:1205,81,0	1/1:5,20:24:69.23:1037,69,0	1/1:2,11:13:33.10:491,33,0	1/1:1,17:18:54.13:800,54,0	1/1:3,21:24:69.23:1075,69,0	0/0:35,0:35:90.31:0,90,1981	1/1:4,6:10:21.03:316,21,0	0/0:24,0:24:66.22:0,66,1334	0/0:26,0:26:78.27:0,78,1733	1/1:4,6:10:20.96:229,21,0	1/1:1,18:19:54.18:789,54,0	1/1:2,18:20:60.05:797,60,0	1/1:4,12:16:33.02:421,33,0	0/0:24,0:24:66.23:0,66,1478	1/1:3,24:27:75.21:1172,75,0	1/1:4,18:22:63.13:929,63,0	1/1:1,4:5:15.02:216,15,0
chr10	7604529	.	CT	C	9707.80	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=19.445;DP=565;FS=2.679;HRun=3;HaplotypeScore=168.6982;InbreedingCoeff=0.9957;MQ=75.23;MQ0=0;MQRankSum=-18.151;QD=30.72;ReadPosRankSum=-2.589;VQSLOD=3.2376;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,105,1506	0/0:10,0:10:30.10:0,30,431	0/0:12,0:12:33.11:0,33,449	0/0:21,1:22:55.53:0,56,699	1/1:0,31:31:81.03:807,81,0	0/0:22,0:22:66.22:0,66,947	0/0:29,0:29:87.27:0,87,1218	1/1:1,15:16:45.14:551,45,0	0/0:20,0:20:60.20:0,60,864	1/1:0,22:22:63.15:744,63,0	1/1:1,14:15:41.34:401,41,0	1/1:0,27:27:77.29:815,77,0	1/1:4,21:24:69.13:763,69,0	1/1:0,13:13:33.06:369,33,0	1/1:0,20:20:57.13:660,57,0	1/1:1,22:23:69.14:781,69,0	0/0:31,0:31:90.26:0,90,1255	1/1:0,6:6:18.06:219,18,0	0/0:16,0:16:45.15:0,45,648	0/0:27,0:27:75.23:0,75,1044	1/1:2,8:10:20.42:220,20,0	1/1:1,18:19:51.03:535,51,0	1/1:0,21:21:54:571,54,0	1/1:0,16:16:41.96:434,42,0	0/0:23,0:23:60.19:0,60,848	1/1:0,26:26:78.21:916,78,0	1/1:0,21:21:63.12:738,63,0	1/1:0,5:5:15.05:184,15,0
chr10	7605533	.	CTCTGTCTCTGTCTCTG	C	3678.40	PASS	AB=0.954;AC=21;AF=0.375;AN=56;BaseQRankSum=-4.032;DP=569;FS=12.270;HRun=0;HaplotypeScore=253.9893;InbreedingCoeff=0.2672;MQ=48.36;MQ0=34;MQRankSum=3.322;QD=14.37;ReadPosRankSum=0.288;VQSLOD=1.1279;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:25:2.72:400,0,3	1/1:9,0:9:6.55:220,7,0	0/0:26,0:3:5.85:0,6,34	0/0:39,0:15:5.51:0,6,275	0/0:26,0:26:42.07:0,42,1434	0/1:9,0:9:18.02:138,0,18	1/1:16,0:14:24.08:495,24,0	0/0:35,0:31:68.87:0,69,980	0/1:15,0:15:18.13:177,0,18	0/0:30,0:27:55.82:0,56,1725	0/0:14,0:13:15.36:0,15,828	1/1:10,0:10:1.56:357,2,0	0/1:21,0:21:99:114,0,200	0/1:10,0:10:22.64:128,0,23	0/0:30,0:30:55.85:0,56,1963	0/0:17,0:17:45.09:0,45,1545	1/1:29,0:29:30.62:525,31,0	0/0:22,0:21:21.44:0,21,1710	1/1:12,0:11:6.41:387,6,0	1/1:16,0:14:15.79:301,16,0	0/0:32,0:32:33.49:0,33,354	0/1:16,0:16:14.03:177,0,14	0/0:10,0:8:2.04:0,2,23	0/1:20,0:19:27.85:63,0,28	0/1:6,15:21:0.48:16,0,0	0/0:26,0:25:65.93:0,66,693	0/1:25,0:24:99:180,0,362	0/0:6,0:6:14.99:0,15,207
chr10	7605547	.	CTG	C	1504.53	PASS	AB=0.994;AC=28;AF=0.500;AN=56;BaseQRankSum=-0.878;DP=576;FS=17.888;HRun=0;HaplotypeScore=170.3173;InbreedingCoeff=0.0380;MQ=49.24;MQ0=22;MQRankSum=1.220;QD=4.06;ReadPosRankSum=-3.393;VQSLOD=1.3369;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:34,0:32:39.65:40,0,105	1/1:10,1:11:0.25:97,0,0	1/1:10,0:1:2.37:8,2,0	0/0:15,0:6:3.32:0,3,44	0/0:31,0:30:18.65:0,19,228	1/1:15,0:15:1.74:105,2,0	1/1:17,1:16:17.95:143,18,0	0/0:31,0:28:55.78:0,56,280	0/1:13,1:14:7.51:81,0,8	0/0:32,1:31:35.42:0,35,428	0/0:22,0:20:14.57:0,15,155	0/1:13,0:13:77.32:77,0,92	0/1:18,0:18:99:121,0,299	0/1:17,0:17:99:112,0,252	0/0:28,0:28:39.58:0,40,295	0/0:14,0:14:18.37:0,18,169	1/1:30,1:31:20.73:175,21,0	0/0:31,0:30:20.49:0,20,263	1/1:11,2:13:1.84:117,2,0	1/1:18,1:17:4.60:111,5,0	0/1:26,0:26:21.85:22,0,248	1/1:17,0:17:5.84:40,6,0	0/1:11,0:9:0:0,0,0	0/1:18,0:17:50.81:51,0,104	0/1:26,0:26:5.96:24,0,6	0/1:29,0:28:98.52:99,0,331	0/1:27,0:26:99:212,0,320	0/1:4,0:4:13.01:37,0,13
chr10	7605549	.	GTCTCTCTCTCTCTCTCTC	G	2798.07	PASS	AB=0.867;AC=11;AF=0.204;AN=54;BaseQRankSum=1.278;DP=568;FS=0.000;HRun=0;HaplotypeScore=282.7014;InbreedingCoeff=0.5069;MQ=49.64;MQ0=21;MQRankSum=2.594;QD=20.42;ReadPosRankSum=0.122;VQSLOD=2.1359;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:31:26.85:0,27,662	0/1:12,0:12:17.64:18,0,415	0/0:8,0:1:0:0,0,0	0/0:10,0:5:0.94:0,1,2	0/0:31,0:30:48.09:0,48,1234	0/0:15,0:15:21.07:0,21,550	0/0:17,0:15:9.03:0,9,227	0/0:32,0:29:56.88:0,57,678	0/0:14,0:14:27.09:0,27,690	0/0:32,0:30:59.22:0,59,1223	0/0:22,0:20:10.83:0,11,466	0/1:13,0:13:99:318,0,104	0/0:18,0:18:31.83:0,32,283	0/0:15,0:15:23.91:0,24,243	0/0:26,0:26:46.96:0,47,1405	0/0:14,0:14:27.95:0,28,1146	0/0:30,0:30:15.94:0,16,353	0/0:31,0:30:59.64:0,60,1537	0/0:14,0:13:6.89:0,7,634	0/0:20,0:18:15.05:0,15,354	1/1:28,0:28:26.28:652,26,0	1/1:18,0:18:6.01:141,6,0	1/1:12,0:10:0.89:2,1,0	0/0:18,0:17:11.26:0,11,86	0/0:27,0:27:20.34:0,20,540	0/1:9,18:26:21.08:868,0,21	1/1:24,3:26:32.30:947,32,0	./.
chr10	7605577	.	CTCTCTCTG	C	4363.20	PASS	AB=0.953;AC=18;AF=0.333;AN=54;BaseQRankSum=-10.147;DP=591;FS=8.872;HRun=0;HaplotypeScore=196.5538;InbreedingCoeff=0.0977;MQ=59.77;MQ0=15;MQRankSum=-0.011;QD=14.54;ReadPosRankSum=0.687;VQSLOD=3.3087;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:34:27.56:0,28,493	0/0:12,0:12:8.40:0,8,446	0/0:13,0:10:23.09:0,23,240	0/0:17,0:13:29.75:0,30,277	0/1:30,0:29:73.09:513,0,73	0/0:14,0:14:27.08:0,27,505	0/0:17,0:15:9.03:0,9,178	1/1:5,22:25:54.76:659,55,0	0/0:18,0:18:42.08:0,42,694	0/1:35,0:34:19.50:1223,0,20	0/1:3,21:23:65.73:66,0,67	0/1:16,0:16:4.28:244,0,4	0/1:18,0:18:3.81:169,0,4	0/1:12,0:12:25.11:25,0,43	0/1:24,0:24:31.40:435,0,31	0/1:17,0:17:99:147,0,124	0/0:37,0:37:15.39:0,15,176	0/1:28,0:27:99:586,0,119	0/0:21,0:19:51.79:0,52,695	0/0:23,0:21:17.97:0,18,277	0/0:30,0:30:39.14:0,39,326	1/1:19,0:19:3.01:70,3,0	1/1:16,0:14:0.47:1,0,0	1/1:17,0:16:17.88:157,18,0	0/0:32,0:32:42.07:0,42,679	0/0:21,0:21:0.94:0,1,392	0/1:17,0:17:67.93:68,0,251	./.
chr10	7605579	.	CTCTCTG	C	3750.23	PASS	AB=1.000;AC=22;AF=0.407;AN=54;BaseQRankSum=-7.510;DP=601;FS=6.047;HRun=0;HaplotypeScore=187.6405;InbreedingCoeff=0.4169;MQ=59.84;MQ0=13;MQRankSum=-0.042;QD=12.38;ReadPosRankSum=3.171;VQSLOD=2.1579;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:37:27.30:0,27,440	0/0:12,0:12:19.39:0,19,349	0/0:13,0:10:23.09:0,23,239	0/0:17,0:13:30.02:0,30,299	0/1:30,0:29:40.70:200,0,41	0/0:14,0:14:27.06:0,27,372	0/0:18,0:16:9.03:0,9,148	1/1:27,0:25:48.08:486,48,0	0/0:18,0:18:42.08:0,42,554	1/1:37,0:36:19.23:805,19,0	0/1:24,0:23:39.84:40,0,43	1/1:14,3:17:20.87:330,21,0	1/1:17,1:18:42.16:540,42,0	1/1:12,0:12:29.96:351,30,0	0/1:25,0:25:34.33:240,0,34	0/1:17,0:17:79.11:84,0,79	0/0:37,0:37:15.28:0,15,164	0/1:28,0:27:99:262,0,114	0/0:21,0:19:51.13:0,51,605	0/0:22,0:21:17.97:0,18,247	0/0:34,0:34:2.44:0,2,172	1/1:0,19:19:3.01:66,3,0	1/1:1,14:14:0.47:1,0,0	1/1:17,0:16:22.62:293,23,0	0/0:32,0:32:45.07:0,45,585	0/0:21,0:21:3.16:0,3,147	0/1:17,0:17:34.73:53,0,35	./.
chr10	7605581	.	C	CTG	1538.15	PASS	AB=0.987;AC=18;AF=0.333;AN=54;BaseQRankSum=-4.521;DP=611;FS=7.649;HRun=0;HaplotypeScore=173.8547;InbreedingCoeff=0.7127;MQ=61.00;MQ0=12;MQRankSum=-0.494;QD=6.06;ReadPosRankSum=0.630;VQSLOD=2.6377;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:37,0:36:7.06:14,0,7	1/1:12,0:12:17.69:141,18,0	0/0:15,0:12:13.30:0,13,167	0/0:17,0:13:16.12:0,16,151	0/0:30,0:30:17.87:0,18,388	1/1:15,0:15:16.82:149,17,0	1/1:4,14:17:7.84:102,8,0	0/0:26,0:25:65.79:0,66,534	1/1:18,1:19:23.61:292,24,0	0/0:37,0:37:99:0,102,1020	0/1:24,0:23:12.80:13,0,54	0/0:17,0:17:14.64:0,15,169	0/0:19,0:19:48.55:0,49,537	0/0:13,0:13:33.03:0,33,371	0/0:25,0:25:28.53:0,29,337	0/0:16,0:18:10.49:0,10,155	0/1:35,2:37:2.94:98,0,3	0/0:27,0:27:45.06:0,45,500	1/1:19,2:19:41.27:408,41,0	1/1:6,16:21:15.49:147,15,0	0/0:34,0:34:50.45:0,50,346	0/0:20,0:20:2.94:0,3,18	0/1:15,0:14:0:0,0,0	0/0:16,0:15:23.71:0,24,220	1/1:32,1:33:43.89:364,44,0	0/0:22,0:22:56.49:0,56,421	0/0:17,0:17:41.80:0,42,324	./.
chr10	7605583	.	CTG	C	3783.04	PASS	AB=0.893;AC=23;AF=0.426;AN=54;BaseQRankSum=-8.430;DP=624;FS=8.950;HRun=0;HaplotypeScore=163.2533;InbreedingCoeff=0.6339;MQ=63.40;MQ0=12;MQRankSum=0.183;QD=12.13;ReadPosRankSum=-1.746;VQSLOD=2.2653;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:37:26.99:0,27,269	0/0:12,0:12:19.29:0,19,288	0/0:19,0:16:31.25:0,31,344	0/0:19,0:15:35.97:0,36,355	1/1:5,25:29:36.06:455,36,0	0/0:16,0:16:32.98:0,33,366	0/0:19,0:17:9.01:0,9,103	1/1:26,0:25:65.99:584,66,0	0/0:20,0:20:47.93:0,48,507	1/1:28,10:37:99:1126,105,0	1/1:24,0:23:5.86:57,6,0	0/1:6,12:18:15.79:106,0,16	0/1:17,2:19:33.37:193,0,33	0/1:13,0:13:42.12:42,0,60	1/1:4,22:26:25.39:324,25,0	1/1:2,14:16:18.03:211,18,0	0/0:4,0:38:8.94:0,9,72	1/1:3,24:27:39.11:515,39,0	0/0:22,0:20:51.85:0,52,492	0/0:22,0:21:17.84:0,18,159	0/0:34,0:34:51.03:0,51,581	1/1:20,0:20:2.98:30,3,0	0/1:15,0:14:0:0,0,0	1/1:15,1:15:12.58:137,13,0	0/0:33,0:33:56.98:0,57,584	0/1:23,1:24:1.89:2,0,614	0/0:19,0:19:44.67:0,45,532	./.
chr10	7605926	.	C	CTGTG	5502.42	PASS	AB=0.768;AC=41;AF=0.788;AN=52;BaseQRankSum=-1.109;DP=593;FS=5.136;HRun=0;HaplotypeScore=170.9478;InbreedingCoeff=0.3297;MQ=61.58;MQ0=5;MQRankSum=-1.022;QD=11.30;ReadPosRankSum=-0.531;VQSLOD=3.6902;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:27:30.03:0,30,280	0/1:4,8:12:24.21:399,0,24	./.	0/0:28,0:18:2.67:0,3,11	1/1:27,0:27:12.40:96,12,0	1/1:8,15:23:29.46:657,29,0	1/1:7,12:21:17.53:298,18,0	1/1:16,0:16:5.85:27,6,0	0/1:12,16:29:0.92:566,0,1	1/1:27,0:27:27.31:332,27,0	0/0:18,0:18:2.99:0,3,23	1/1:16,0:17:6.89:72,7,0	1/1:18,0:19:2.95:47,3,0	0/1:20,0:20:0.09:0,0,0	1/1:13,0:13:6.88:52,7,0	1/1:13,0:13:5.59:48,6,0	1/1:11,25:39:34.78:682,35,0	0/1:10,0:10:5.88:8,0,6	1/1:13,5:17:20.80:340,21,0	0/1:10,14:27:3.92:315,0,4	1/1:28,1:28:11.55:137,12,0	1/1:23,0:23:2.97:25,3,0	1/1:12,0:12:2.59:24,3,0	./.	1/1:12,8:22:11.51:169,12,0	1/1:29,0:32:50.83:720,51,0	1/1:13,0:19:21.04:325,21,0	1/1:12,0:15:17.91:165,18,0
chr10	7605954	.	GTA	G	815.56	PASS	AB=0.941;AC=19;AF=0.339;AN=56;BaseQRankSum=5.567;DP=655;FS=9.718;HRun=0;HaplotypeScore=178.0068;InbreedingCoeff=-0.3730;MQ=43.78;MQ0=15;MQRankSum=-4.104;QD=1.97;ReadPosRankSum=-1.153;VQSLOD=1.9823;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:27:62.96:63,0,86	0/1:12,0:12:5.97:6,0,191	0/0:26,0:8:5:0,5,59	0/0:36,0:14:25.47:0,25,199	0/1:22,9:30:73.23:73,0,97	0/0:23,0:22:22.34:0,22,367	0/0:21,0:21:35.65:0,36,313	0/1:33,1:28:51.70:52,0,482	0/1:30,0:30:12.60:13,0,257	0/1:27,4:31:99:179,0,307	1/1:13,3:15:0.89:2,1,0	0/1:15,2:17:11.37:52,0,11	0/1:21,1:22:3.49:3,0,49	0/0:19,0:18:11.14:0,11,89	0/1:15,2:17:15.76:59,0,16	0/1:12,0:12:13.98:14,0,62	0/0:38,0:38:57.77:0,58,535	0/1:11,4:15:82.33:82,0,83	0/0:20,0:19:22.45:0,22,340	0/0:27,0:26:23.36:0,23,357	0/1:32,0:29:27.59:28,0,133	0/1:13,2:15:16.01:46,0,16	0/1:18,1:19:14.50:18,0,14	0/0:8,0:8:0:0,0,0	0/0:21,0:21:40.97:0,41,349	0/1:43,0:42:99:121,0,498	0/1:18,0:18:61.26:61,0,124	0/1:24,0:24:93.04:93,0,207
chr10	7605961	.	TGC	T	360.12	PASS	AB=0.945;AC=12;AF=0.222;AN=54;BaseQRankSum=5.888;DP=671;FS=2.608;HRun=0;HaplotypeScore=185.0341;InbreedingCoeff=-0.1967;MQ=42.63;MQ0=18;MQRankSum=-5.556;QD=1.48;ReadPosRankSum=-3.063;VQSLOD=2.4061;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:50.97:0,51,685	0/0:13,0:13:2.04:0,2,399	0/0:34,0:9:18.78:0,19,238	0/0:42,0:13:33:0,33,534	0/1:28,4:31:32.07:32,0,203	0/0:18,1:19:42.05:0,42,760	0/0:19,0:19:42.08:0,42,721	0/1:34,1:28:42.76:43,0,1046	0/1:31,0:31:4.87:5,0,625	0/1:28,0:28:99:150,0,694	1/1:15,3:17:2.64:12,3,0	0/1:16,1:17:42.82:55,0,43	0/0:21,0:21:2.35:0,2,146	0/0:21,0:20:10.48:0,10,213	0/1:15,1:16:48.04:59,0,48	0/1:13,0:13:24.80:25,0,103	0/0:42,0:42:72.13:0,72,1212	0/1:11,3:14:74.09:74,0,287	0/0:20,0:18:13.08:0,13,662	0/0:26,0:26:33.68:0,34,796	0/0:39,0:35:3.19:0,3,284	0/1:12,2:14:19.54:20,0,52	0/0:18,0:18:2.41:0,2,55	./.	0/0:20,0:20:48.02:0,48,823	0/0:45,0:44:5.53:0,6,1140	0/0:14,0:14:16.67:0,17,256	0/1:26,0:26:25.93:26,0,434
chr10	7605971	.	TGTATGTGG	T	1272.01	PASS	AB=0.970;AC=11;AF=0.196;AN=56;BaseQRankSum=6.260;DP=731;FS=16.725;HRun=0;HaplotypeScore=266.8106;InbreedingCoeff=-0.0336;MQ=41.22;MQ0=20;MQRankSum=-6.190;QD=5.32;ReadPosRankSum=-2.964;VQSLOD=0.8265;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:60.21:0,60,1969	0/0:12,0:12:17.92:0,18,1044	0/0:50,0:12:28.77:0,29,791	0/0:45,0:15:39.09:0,39,823	0/0:34,0:33:12.01:0,12,408	0/0:24,0:24:52.03:0,52,1614	0/0:18,0:18:43.02:0,43,1364	0/0:47,0:38:36.26:0,36,1440	0/0:31,0:32:34.44:0,34,1528	0/1:35,0:35:14.27:14,0,1176	1/1:22,0:21:5.78:51,6,0	0/1:16,0:16:13.06:13,0,208	0/0:21,0:21:9.13:0,9,315	0/1:26,0:25:42.26:42,0,390	0/1:18,0:18:68.60:69,0,107	0/1:15,0:15:40.07:40,0,231	0/0:32,0:32:72.07:0,72,2362	0/1:14,0:14:1.35:1,0,298	0/0:20,0:19:48.16:0,48,1690	0/0:22,0:22:51.80:0,52,1782	0/0:41,0:37:22.71:0,23,593	0/0:17,0:17:6.46:0,6,121	0/0:19,0:19:3.57:0,4,109	0/0:10,0:10:0:0,0,0	0/0:21,0:21:54.15:0,54,1897	0/1:41,5:45:99:770,0,1780	0/1:15,2:16:99:171,0,372	0/1:28,2:30:99:241,0,784
chr10	7605972	.	GTA	G	113.85	PASS	AB=0.998;AC=13;AF=0.232;AN=56;BaseQRankSum=8.298;DP=730;FS=6.896;HRun=0;HaplotypeScore=223.7399;InbreedingCoeff=-0.0746;MQ=41.07;MQ0=20;MQRankSum=-5.420;QD=0.42;ReadPosRankSum=-3.824;VQSLOD=0.9954;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:62.19:0,62,1054	0/0:12,0:12:20.99:0,21,527	0/0:51,0:13:35.57:0,36,463	0/0:44,1:15:41.98:0,42,675	0/1:34,0:33:9.35:9,0,217	0/0:23,0:23:59.90:0,60,855	0/0:19,0:19:47.99:0,48,804	0/0:47,0:38:95.94:0,96,1392	0/0:30,0:30:34.19:0,34,732	0/1:35,0:35:55.07:55,0,804	1/1:22,0:21:4.55:17,5,0	0/1:17,0:17:7.86:8,0,111	0/0:21,0:21:20.66:0,21,284	0/1:26,0:25:1.35:1,0,236	0/1:18,0:18:21.67:22,0,66	0/1:14,0:14:9.78:10,0,109	0/0:32,0:32:78.18:0,78,1373	0/1:14,0:14:13.44:13,0,373	0/0:19,0:18:22.07:0,22,782	0/0:22,0:22:50.54:0,51,956	0/0:38,3:37:1.44:0,1,325	0/1:17,0:17:17.07:17,0,52	0/0:19,0:19:2.95:0,3,58	0/1:10,0:10:0:0,0,0	0/0:21,0:21:51.15:0,51,912	0/1:46,1:46:92.89:93,0,1173	0/1:17,0:16:3.94:4,0,227	0/0:30,0:30:4.12:0,4,520
chr10	7605978	.	GGGTA	G	1241.01	PASS	AB=0.944;AC=15;AF=0.268;AN=56;BaseQRankSum=7.910;DP=724;FS=22.143;HRun=0;HaplotypeScore=224.1665;InbreedingCoeff=-0.1586;MQ=41.67;MQ0=22;MQRankSum=-7.207;QD=3.77;ReadPosRankSum=-4.902;VQSLOD=0.2790;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:69.23:0,69,1719	0/1:11,0:11:0.64:1,0,767	0/0:62,0:17:44.07:0,44,905	0/0:49,0:16:39.96:0,40,746	0/0:31,2:32:12.03:0,12,222	0/0:20,1:21:52.06:0,52,1426	0/0:19,0:19:49.04:0,49,1239	0/1:36,4:31:99:173,0,1138	0/0:25,0:25:17.41:0,17,1336	0/1:29,4:33:99:340,0,695	1/1:16,3:18:5.90:116,6,0	0/1:17,1:18:78.14:78,0,150	0/1:18,1:19:50.04:50,0,162	0/1:26,0:25:99:175,0,165	0/1:13,2:15:47.63:209,0,48	0/1:11,2:13:99:105,0,104	0/0:29,0:29:72.15:0,72,1767	0/1:10,0:10:17.94:18,0,290	0/0:19,0:16:48.11:0,48,1281	0/0:21,0:21:42.93:0,43,1350	0/1:51,1:47:26.49:26,0,389	0/0:17,0:17:4.36:0,4,61	0/0:21,0:21:3.58:0,4,56	0/1:8,1:9:0:0,0,0	0/0:22,0:22:57.20:0,57,1498	0/1:47,0:46:51.10:51,0,1207	0/1:16,0:16:49.11:49,0,345	0/0:28,0:28:24.91:0,25,632
chr10	7605982	.	A	ATGTG	4659.81	PASS	AB=0.822;AC=27;AF=0.482;AN=56;BaseQRankSum=4.703;DP=777;FS=0.855;HRun=0;HaplotypeScore=239.0186;InbreedingCoeff=0.4633;MQ=41.17;MQ0=27;MQRankSum=-6.622;QD=10.29;ReadPosRankSum=-1.611;VQSLOD=4.0545;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:51.17:0,51,880	0/0:11,0:11:10.06:0,10,345	0/0:67,0:19:40.73:0,41,449	0/0:52,0:18:11.80:0,12,246	1/1:19,11:32:9.02:227,9,0	0/0:22,0:22:48.12:0,48,828	0/0:23,0:23:44.29:0,44,651	0/1:37,3:31:77.85:568,0,78	0/0:25,0:25:39.33:0,39,805	1/1:26,8:36:43.94:1064,44,0	1/1:12,8:19:6.01:141,6,0	0/1:8,8:19:38.94:220,0,39	1/1:11,7:18:14.73:363,15,0	1/1:17,15:32:31.07:614,31,0	1/1:12,5:19:17.01:329,17,0	1/1:11,6:17:17.25:323,17,0	0/0:28,0:29:59.95:0,60,930	1/1:8,2:10:14.89:209,15,0	0/0:22,0:19:42.05:0,42,611	0/0:20,0:20:42.08:0,42,663	0/1:46,0:51:47.03:84,0,47	1/1:7,13:21:5.29:22,5,0	1/1:12,11:24:2.52:76,3,0	0/1:7,1:8:0:0,0,0	0/0:23,0:23:51.16:0,51,853	0/1:35,1:52:99:312,0,520	0/1:16,0:16:19.51:20,0,274	0/1:20,0:29:86.89:87,0,340
chr10	7605992	.	G	GTA	1195.53	PASS	AB=0.966;AC=21;AF=0.375;AN=56;BaseQRankSum=8.940;DP=812;FS=1.934;HRun=0;HaplotypeScore=244.7305;InbreedingCoeff=0.2244;MQ=41.24;MQ0=29;MQRankSum=-5.931;QD=2.74;ReadPosRankSum=2.758;VQSLOD=2.6361;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:71.87:0,72,947	0/0:12,0:12:36.07:0,36,481	0/0:69,0:17:49.80:0,50,638	0/0:53,0:16:29:0,29,323	1/1:26,0:26:3.73:8,4,0	0/0:22,0:22:60.13:0,60,830	0/0:26,0:26:65.63:0,66,847	0/1:37,0:28:3.71:4,0,332	0/0:28,0:28:53.91:0,54,897	0/1:36,2:38:99:192,0,188	1/1:16,2:18:3.54:12,4,0	0/1:22,0:22:34.85:35,0,54	0/1:19,0:19:20.54:21,0,55	1/1:32,4:35:18:107,18,0	0/1:16,3:20:11.21:42,0,11	0/1:17,3:20:1.66:73,0,2	0/0:26,0:26:66.02:0,66,910	1/1:8,0:8:14.31:62,14,0	0/0:29,0:26:73.02:0,73,921	0/0:23,0:23:57.11:0,57,758	0/1:61,0:53:90.20:90,0,92	1/1:21,0:20:2.41:24,2,0	1/1:26,1:27:0.70:3,1,0	0/0:8,0:8:0:0,0,0	0/0:24,0:24:63.12:0,63,873	0/1:53,0:52:99:439,0,808	0/0:18,0:17:8.14:0,8,322	0/1:29,0:29:99:251,0,402
chr10	7606020	.	A	ATG	4562.71	PASS	AB=0.740;AC=30;AF=0.536;AN=56;BaseQRankSum=13.260;DP=856;FS=5.884;HRun=0;HaplotypeScore=258.3830;InbreedingCoeff=0.6684;MQ=40.56;MQ0=26;MQRankSum=-11.520;QD=9.22;ReadPosRankSum=-3.194;VQSLOD=3.4546;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,1:36:81.25:0,81,1052	0/0:7,0:7:18.53:0,19,235	0/0:57,0:15:21:0,21,238	0/0:56,0:13:28.89:0,29,337	1/1:24,0:27:6.45:50,6,0	0/0:25,0:25:72.18:0,72,926	0/0:39,0:39:93.29:0,93,1193	1/1:25,0:21:31.83:250,32,0	0/0:35,0:35:87.26:0,87,1106	1/1:37,0:44:70.88:564,71,0	1/1:11,1:16:8.98:86,9,0	1/1:22,0:31:36.13:365,36,0	1/1:15,0:22:30.58:323,31,0	1/1:21,1:36:10.90:275,11,0	1/1:19,0:30:20.50:155,21,0	1/1:15,0:24:31.57:266,32,0	0/0:24,0:24:47.47:0,47,728	1/1:6,0:7:5.55:65,6,0	0/0:26,0:22:45.15:0,45,585	0/0:24,0:24:66.21:0,66,857	1/1:20,36:55:7.56:180,8,0	1/1:15,0:17:4:35,4,0	1/1:19,0:26:0.93:3,1,0	0/1:9,0:11:0:0,0,0	0/0:29,0:29:84.26:0,84,1070	0/1:17,27:59:99:1180,0,106	0/1:5,11:21:9.57:322,0,10	0/1:2,10:30:46.31:443,0,46
chr10	7606026	.	GTGTA	G	199.15	PASS	AB=0.992;AC=16;AF=0.286;AN=56;BaseQRankSum=5.017;DP=873;FS=6.228;HRun=0;HaplotypeScore=281.9476;InbreedingCoeff=-0.1107;MQ=39.23;MQ0=33;MQRankSum=-3.403;QD=0.48;ReadPosRankSum=-4.309;VQSLOD=0.7681;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:93.15:0,93,2217	0/1:7,0:7:2.90:3,0,453	0/0:62,0:16:32.11:0,32,518	0/0:58,0:12:26.18:0,26,599	0/1:27,0:27:13.28:13,0,101	0/0:25,0:25:72.24:0,72,1812	0/0:39,0:39:99:0,104,2607	0/1:29,3:27:99:148,0,382	0/0:34,0:34:90.10:0,90,2200	0/1:43,0:41:87.73:88,0,656	0/1:16,0:16:2.42:2,0,71	0/1:31,0:31:10.17:10,0,106	0/1:22,0:21:8.59:9,0,59	0/1:34,0:34:10.57:11,0,54	0/1:30,1:31:6.18:6,0,157	0/1:24,0:23:7.89:8,0,274	0/0:24,0:24:63.01:0,63,1489	0/0:4,0:4:5.98:0,6,71	0/0:26,0:20:48.05:0,48,1119	0/0:25,0:25:72.25:0,72,1811	0/1:70,0:64:1.40:1,0,163	1/1:16,0:15:0.72:1,1,0	0/1:24,0:24:0:1,0,0	0/1:11,0:11:0:0,0,0	0/0:31,0:31:90.06:0,90,2072	0/0:63,0:60:99:0,108,1523	0/0:23,0:22:32.37:0,32,384	0/1:31,0:31:27.86:28,0,484
chr10	7606052	.	ATGTG	A	1211.43	PASS	AB=0.833;AC=10;AF=0.179;AN=56;BaseQRankSum=9.102;DP=951;FS=17.130;HRun=0;HaplotypeScore=301.0893;InbreedingCoeff=0.5507;MQ=40.18;MQ0=28;MQRankSum=-8.090;QD=6.73;ReadPosRankSum=-2.089;VQSLOD=0.3930;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,105,2519	0/0:10,0:10:27.09:0,27,658	0/0:58,0:20:53.96:0,54,1043	0/0:62,0:20:48.15:0,48,889	0/0:25,0:25:12.04:0,12,258	0/0:30,0:30:79.40:0,79,1907	0/0:53,0:53:99:0,131,3246	0/0:37,0:32:78.18:0,78,1804	0/0:43,0:43:99:0,111,2733	0/0:34,0:33:75.16:0,75,1492	0/0:20,0:20:9.03:0,9,220	1/1:11,19:30:37.04:553,37,0	1/1:6,17:23:36.05:528,36,0	1/1:15,21:35:4.18:227,4,0	0/1:31,0:31:12.91:13,0,303	0/1:28,0:27:32.29:32,0,527	0/0:29,0:29:66.20:0,66,1542	0/0:6,0:6:1.09:0,1,182	0/0:31,0:26:56.86:0,57,1287	0/0:25,0:25:66.15:0,66,1522	0/0:103,0:94:14.70:0,15,382	0/0:8,11:19:2.19:0,2,11	0/1:7,14:21:0.08:0,0,0	0/1:7,4:11:0.05:0,0,0	0/0:24,0:25:66.01:0,66,1630	0/0:61,0:58:99:0,147,3405	0/0:25,0:24:36.04:0,36,817	0/0:29,0:28:45.10:0,45,1073
chr10	7606081	.	T	TG	7424.25	PASS	AB=0.555;AC=30;AF=0.536;AN=56;BaseQRankSum=14.943;DP=847;FS=29.136;HRun=1;HaplotypeScore=224.8991;InbreedingCoeff=0.7846;MQ=47.18;MQ0=8;MQRankSum=-13.989;QD=17.51;ReadPosRankSum=-3.986;VQSLOD=1.3983;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:60,0:59:99:0,165,2259	0/0:11,0:11:33.11:0,33,458	0/0:61,0:31:87.28:0,87,1159	0/0:64,0:32:65.63:0,66,1126	1/1:0,18:18:14.41:200,14,0	0/0:29,0:29:87.29:0,87,1215	0/0:47,2:49:99:0,138,1857	1/1:10,15:24:61.08:816,61,0	0/0:41,0:42:99:0,117,1610	1/1:2,18:20:57.11:868,57,0	1/1:4,13:17:20.16:184,20,0	1/1:5,21:26:40.01:584,40,0	1/1:2,27:29:47.85:735,48,0	1/1:1,22:23:27.91:330,28,0	0/1:3,21:24:7.59:197,0,8	1/1:5,19:24:12.13:291,12,0	0/0:31,0:31:76.84:0,77,1154	1/1:1,5:6:16.87:245,17,0	0/0:32,0:32:84.26:0,84,1122	0/0:23,0:23:69.23:0,69,963	1/1:12,63:73:10.99:136,11,0	0/1:3,16:19:8.90:16,0,9	0/1:3,13:16:3.37:3,0,7	0/1:6,13:19:0.01:12,0,0	0/0:21,0:21:60.20:0,60,839	1/1:5,33:41:99:1781,117,0	1/1:4,19:25:38.58:598,39,0	1/1:0,9:13:27.09:429,27,0
chr10	7606091	.	A	ATGTG	4317.88	PASS	AB=0.896;AC=24;AF=0.429;AN=56;BaseQRankSum=10.511;DP=785;FS=28.257;HRun=0;HaplotypeScore=243.1394;InbreedingCoeff=0.4551;MQ=48.22;MQ0=11;MQRankSum=-11.850;QD=12.23;ReadPosRankSum=-6.761;VQSLOD=1.9975;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:55:99:0,138,2267	0/0:11,0:11:30.10:0,30,510	0/0:47,0:26:37.26:0,37,529	0/0:62,0:36:46.88:0,47,639	0/1:14,0:18:21.75:88,0,22	0/0:27,0:28:81.20:0,81,1257	0/0:44,0:44:99:0,102,1594	1/1:20,0:23:1.81:224,2,0	0/0:38,0:40:64.89:0,65,1353	1/1:6,1:18:45.07:702,45,0	0/1:9,0:16:14.79:15,0,18	1/1:12,6:20:29.73:547,30,0	1/1:14,18:34:38.96:855,39,0	1/1:14,12:26:24.58:494,25,0	1/1:7,0:28:2.46:277,2,0	1/1:4,0:23:50.19:497,50,0	0/0:30,0:32:52.81:0,53,1020	0/1:7,1:8:29.79:113,0,30	0/0:28,0:27:48.10:0,48,771	0/0:20,0:21:48.11:0,48,757	0/1:44,0:51:26.24:26,0,45	1/1:7,13:20:11.35:276,11,0	1/1:6,9:15:2.80:69,3,0	0/0:10,6:19:0.81:0,1,2	0/0:18,0:19:42.10:0,42,631	0/1:20,0:35:99:112,0,274	0/0:9,0:24:22.31:0,22,175	0/1:8,0:11:23.24:23,0,37
chr10	7606104	.	TGC	T	534.10	PASS	AB=0.986;AC=7;AF=0.125;AN=56;BaseQRankSum=7.455;DP=741;FS=2.931;HRun=0;HaplotypeScore=213.1171;InbreedingCoeff=0.1793;MQ=49.21;MQ0=6;MQRankSum=-5.582;QD=3.12;ReadPosRankSum=0.061;VQSLOD=2.7500;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:57:99:0,133,2628	0/0:11,0:11:33.01:0,33,590	0/0:32,0:21:31.98:0,32,656	0/0:50,0:30:71.40:0,71,1013	0/1:17,1:18:25.59:26,0,144	0/0:28,0:28:71.11:0,71,1410	0/0:40,0:40:99:0,111,1903	0/0:28,0:28:60.57:0,61,497	0/0:35,0:35:42.29:0,42,1529	0/0:18,1:19:1.36:0,1,296	0/0:15,1:16:22.63:0,23,133	0/0:19,3:22:18.93:0,19,280	0/0:31,1:32:56.21:0,56,487	0/0:22,3:25:36.74:0,37,269	0/1:31,0:31:20.18:20,0,84	0/0:29,0:29:46.32:0,46,324	0/0:27,0:27:55.91:0,56,1183	0/0:9,0:9:23.83:0,24,215	0/0:25,0:24:68.82:0,69,1004	0/0:17,0:17:30.16:0,30,806	0/1:57,1:54:47.99:48,0,142	0/0:18,0:19:23.77:0,24,158	0/0:11,3:14:10.66:0,11,95	0/0:19,1:20:12.87:0,13,87	0/0:15,0:15:32.07:0,32,775	0/1:35,0:35:94.66:306,0,95	0/1:21,0:21:6.46:191,0,6	1/1:8,0:6:11.82:76,12,0
chr10	7606613	.	G	GT	8729.86	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=7.301;DP=618;FS=4.166;HRun=6;HaplotypeScore=77.8731;InbreedingCoeff=0.9993;MQ=79.59;MQ0=0;MQRankSum=-5.842;QD=30.74;ReadPosRankSum=0.293;VQSLOD=5.3740;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,99,1003	0/0:10,0:10:27.06:0,27,275	0/0:17,0:17:35.92:0,36,417	0/0:25,0:24:38.32:0,38,420	1/1:1,31:32:81.13:962,81,0	0/0:20,0:20:57.11:0,57,573	0/0:17,0:17:42.09:0,42,428	1/1:1,29:31:84.21:1011,84,0	0/0:21,0:21:54.11:0,54,544	1/1:0,25:25:75.22:918,75,0	1/1:3,19:22:57.10:678,57,0	1/1:3,11:14:30.10:374,30,0	1/1:2,25:27:66.21:830,66,0	1/1:3,20:23:54.07:657,54,0	1/1:3,14:17:30.10:377,30,0	1/1:0,10:10:27.09:340,27,0	0/0:34,0:34:99:0,99,977	1/1:3,21:24:60.19:752,60,0	0/0:22,0:22:54.10:0,54,546	0/0:36,0:36:99:0,99,984	0/0:15,0:15:42.07:0,42,420	1/1:2,20:22:60.18:735,60,0	1/1:2,15:17:41.78:528,42,0	1/1:3,17:20:45.14:566,45,0	0/0:20,0:20:57.13:0,57,581	0/0:23,0:23:57.11:0,57,570	0/0:28,0:28:72.16:0,72,734	0/0:9,0:9:24.05:0,24,245
chr10	7607020	.	C	CACTA	5524.27	PASS	AB=0.830;AC=16;AF=0.308;AN=52;BaseQRankSum=-10.527;DP=726;FS=2.948;HRun=0;HaplotypeScore=131.8427;InbreedingCoeff=0.7889;MQ=69.66;MQ0=2;MQRankSum=4.081;QD=20.77;ReadPosRankSum=-3.356;VQSLOD=4.2645;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,14:26:36.12:843,36,0	./.	./.	0/1:25,0:19:0:0,0,0	1/1:20,13:34:42.06:827,42,0	0/0:12,0:26:24.03:0,24,223	0/0:13,0:18:3:0,3,28	1/1:36,0:35:9.03:153,9,0	0/0:10,0:28:40.29:0,40,367	1/1:21,18:41:63.19:1339,63,0	1/1:9,9:19:24.04:511,24,0	0/0:34,0:34:45.15:0,45,685	0/0:31,0:31:60.19:0,60,901	0/0:23,0:23:27.09:0,27,416	1/1:18,17:37:36.12:843,36,0	0/1:18,18:37:1.06:938,0,1	0/0:7,0:13:3:0,3,28	1/1:8,2:10:3.01:70,3,0	0/0:17,0:20:6.01:0,6,56	0/0:17,0:32:33.04:0,33,308	0/0:21,0:21:33.09:0,33,481	0/0:27,0:28:42.10:0,42,565	0/0:31,0:32:51.15:0,51,745	0/0:22,0:22:33.11:0,33,508	0/0:7,0:20:27:0,27,245	0/0:32,0:33:54.15:0,54,757	0/0:33,0:33:57.19:0,57,872	0/0:5,0:5:6.02:0,6,92
chr10	7607953	.	ACG	A	2410.53	PASS	AB=1.000;AC=31;AF=0.554;AN=56;BaseQRankSum=1.664;DP=553;FS=0.853;HRun=0;HaplotypeScore=161.1477;InbreedingCoeff=0.7176;MQ=70.28;MQ0=15;MQRankSum=-3.630;QD=8.40;ReadPosRankSum=-2.725;VQSLOD=3.1070;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:68.38:0,68,720	0/0:9,0:9:19.56:0,20,204	0/0:41,0:34:67.71:0,68,1440	0/0:45,1:34:41.26:0,41,1048	0/1:20,0:16:1.50:115,0,2	0/0:24,0:24:71.47:0,71,932	0/0:25,0:25:56.97:0,57,894	1/1:22,0:21:23.38:404,23,0	0/0:18,0:18:36.70:0,37,549	1/1:18,0:18:20.42:152,20,0	1/1:11,0:9:14.91:115,15,0	1/1:25,1:24:31.60:337,32,0	1/1:13,1:14:1.21:138,1,0	1/1:11,0:10:14.97:123,15,0	1/1:20,0:19:2.99:24,3,0	1/1:20,0:20:8.88:61,9,0	0/0:18,0:18:35.93:0,36,455	0/1:11,0:8:10.30:83,0,10	0/0:25,0:24:69.08:0,69,940	0/0:21,0:21:62.85:0,63,886	1/1:19,0:18:17.45:148,17,0	1/1:15,0:12:0.28:88,0,0	1/1:14,2:16:4.39:171,4,0	1/1:23,2:20:17.83:132,18,0	0/0:9,0:9:26.71:0,27,359	1/1:14,0:14:6.83:244,7,0	1/1:14,0:11:23.87:190,24,0	0/1:11,0:11:0.04:89,0,0
chr10	7607957	.	GCGCTCTCTCTCTCTCTCTCCTTCTCTT	G	6061.06	PASS	AB=1.000;AC=35;AF=0.625;AN=56;BaseQRankSum=-0.883;DP=543;FS=1.820;HRun=0;HaplotypeScore=346.0810;InbreedingCoeff=0.9012;MQ=69.34;MQ0=21;MQRankSum=-4.527;QD=21.72;ReadPosRankSum=-2.090;VQSLOD=2.5996;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:37.26:0,37,1880	0/1:10,0:10:3.82:4,0,523	0/0:43,0:31:58.10:0,58,1224	0/0:50,0:34:74.13:0,74,1193	1/1:19,0:15:17.98:192,18,0	0/0:24,0:24:60.93:0,61,1773	0/0:24,0:24:20.99:0,21,1146	1/1:20,0:19:51.40:562,51,0	0/0:18,0:18:37.16:0,37,1644	1/1:17,1:18:9.01:716,9,0	1/1:10,0:8:12.01:192,12,0	1/1:24,0:22:48.87:597,49,0	1/1:13,0:13:26.93:498,27,0	1/1:11,0:10:14.99:126,15,0	1/1:20,0:19:6.02:230,6,0	1/1:3,15:18:15.05:456,15,0	0/0:19,0:19:34.27:0,34,1201	1/1:10,0:7:20.99:322,21,0	0/0:25,0:24:49.31:0,49,1588	0/0:17,0:17:42.06:0,42,970	1/1:15,0:14:11.98:99,12,0	1/1:14,0:11:15.01:228,15,0	1/1:15,0:15:27.95:330,28,0	1/1:24,0:19:18:184,18,0	0/0:9,0:9:15.58:0,16,585	1/1:14,0:14:42.01:631,42,0	1/1:14,0:11:23.84:290,24,0	1/1:10,0:10:23.99:406,24,0
chr10	7607958	.	CGCTCTCTCTCTCTCTCTCCTTCTCT	C	6529.07	PASS	AB=1.000;AC=35;AF=0.625;AN=56;BaseQRankSum=-1.321;DP=548;FS=1.305;HRun=0;HaplotypeScore=325.4590;InbreedingCoeff=0.9094;MQ=67.96;MQ0=21;MQRankSum=-4.314;QD=23.66;ReadPosRankSum=-2.428;VQSLOD=2.8364;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:40.26:0,40,1977	0/1:10,0:10:3.82:4,0,467	0/0:48,0:32:60.68:0,61,1246	0/0:51,0:32:73.82:0,74,1160	1/1:18,0:14:17.98:192,18,0	0/0:26,0:26:60.79:0,61,1573	0/0:25,0:25:20.89:0,21,1005	1/1:19,0:18:51.40:563,51,0	0/0:18,0:18:37.52:0,38,1494	1/1:1,17:18:28.79:824,29,0	1/1:10,0:8:12.01:215,12,0	1/1:24,0:22:47.98:655,48,0	1/1:13,0:13:26.92:544,27,0	1/1:11,0:10:14.99:126,15,0	1/1:1,19:19:6.02:319,6,0	1/1:17,1:18:15.05:499,15,0	0/0:19,0:19:34.26:0,34,1088	1/1:10,0:7:20.99:367,21,0	0/0:25,0:24:48.99:0,49,1427	0/0:18,0:18:42.06:0,42,882	1/1:14,0:13:11.98:99,12,0	1/1:14,0:11:15.01:228,15,0	1/1:15,0:15:27.95:375,28,0	1/1:24,0:19:18:204,18,0	0/0:8,0:8:15.58:0,16,515	1/1:14,0:14:42.01:600,42,0	1/1:14,0:11:24.01:311,24,0	1/1:10,0:10:23.99:406,24,0
chr10	7607974	.	CT	C	1945.45	PASS	AB=0.851;AC=16;AF=0.308;AN=52;BaseQRankSum=-4.503;DP=465;FS=5.712;HRun=1;HaplotypeScore=143.6530;InbreedingCoeff=0.4895;MQ=57.00;MQ0=23;MQRankSum=4.355;QD=8.76;ReadPosRankSum=5.926;VQSLOD=1.3306;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,17:35:42.89:443,43,0	1/1:7,3:10:14.69:96,15,0	0/0:33,1:18:38.80:0,39,599	0/0:38,0:20:45.82:0,46,552	0/0:14,0:10:5.92:0,6,42	1/1:18,11:28:44.51:380,45,0	1/1:8,14:22:36.57:318,37,0	0/0:6,0:4:9.20:0,9,62	1/1:9,9:18:15.35:236,15,0	0/0:18,0:18:3.05:0,3,58	0/0:8,0:6:5.70:0,6,30	0/0:14,0:12:10.50:0,10,71	0/0:11,0:11:9.34:0,9,69	./.	0/1:20,0:19:1.73:2,0,11	0/0:18,0:18:8.07:0,8,37	0/1:16,7:23:72.50:152,0,72	0/0:8,0:4:7.14:0,7,66	0/1:20,7:26:82.30:232,0,82	1/1:16,5:21:27.61:192,28,0	./.	0/0:12,0:9:5.46:0,5,29	0/0:9,0:9:2.15:0,2,31	0/0:18,0:13:5.65:0,6,28	0/1:13,3:16:29.69:70,0,30	0/0:7,0:7:19.80:0,20,120	0/0:9,0:6:6.65:0,7,35	0/0:6,0:6:14.49:0,14,91
chr10	7607976	.	CCT	C	5974.22	PASS	AC=50;AF=0.926;AN=54;BaseQRankSum=0.790;DP=447;FS=0.000;HRun=0;HaplotypeScore=129.3827;InbreedingCoeff=0.5783;MQ=57.51;MQ0=25;MQRankSum=-1.164;QD=16.10;ReadPosRankSum=3.751;VQSLOD=4.9729;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:33,2:34:72.08:801,72,0	1/1:4,5:9:11.55:143,12,0	0/0:33,0:18:41.74:0,42,579	0/0:38,0:20:40.21:0,40,496	1/1:4,8:8:3.01:46,3,0	1/1:27,0:28:60.91:716,61,0	1/1:21,0:22:26.33:522,26,0	1/1:2,3:3:5.71:46,6,0	1/1:18,0:18:33.48:458,33,0	1/1:18,0:18:17.99:163,18,0	1/1:2,5:5:6.02:79,6,0	1/1:6,7:11:14.88:157,15,0	1/1:4,7:10:20.92:213,21,0	1/1:3,3:5:2.74:12,3,0	1/1:20,0:19:2.84:14,3,0	1/1:16,2:18:11.90:107,12,0	1/1:22,0:23:34.76:461,35,0	1/1:1,7:4:9.39:82,9,0	1/1:13,13:25:58.25:649,58,0	1/1:8,13:21:29.99:331,30,0	./.	1/1:3,7:7:6.01:71,6,0	1/1:5,4:9:8.97:67,9,0	1/1:8,10:12:6.02:67,6,0	1/1:16,0:16:31.91:370,32,0	1/1:1,4:5:13.86:163,14,0	1/1:0,8:5:9.03:112,9,0	1/1:2,2:4:12.02:123,12,0
chr10	7607977	.	CT	C	1851.42	PASS	AB=0.918;AC=38;AF=0.704;AN=54;BaseQRankSum=-0.546;DP=449;FS=8.100;HRun=2;HaplotypeScore=139.1432;InbreedingCoeff=0.2470;MQ=57.53;MQ0=26;MQRankSum=1.693;QD=5.51;ReadPosRankSum=3.798;VQSLOD=0.5336;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:20,16:35:45.71:384,46,0	1/1:5,4:9:13.45:67,13,0	0/0:32,1:18:41.75:0,42,507	0/0:38,0:20:47.02:0,47,487	1/1:12,0:8:2.22:7,2,0	1/1:14,14:27:63.58:390,64,0	1/1:7,15:22:41.12:278,41,0	0/1:5,0:3:0.80:1,0,2	1/1:9,9:18:16.15:200,16,0	1/1:18,0:18:2.68:15,3,0	1/1:7,0:5:1.34:6,1,0	1/1:13,0:11:3.76:16,4,0	0/1:11,0:9:3.09:29,0,3	1/1:6,0:5:2.50:9,2,0	0/1:20,0:19:1.79:2,0,17	0/0:18,0:18:0.26:0,0,17	0/1:14,7:22:47.45:117,0,47	0/1:10,0:6:1.82:2,0,8	0/1:18,8:25:47.97:213,0,48	1/1:16,5:21:21.70:147,22,0	./.	1/1:9,0:6:2.37:8,2,0	0/1:10,0:10:3.60:12,0,4	0/0:19,0:13:1.75:0,2,4	0/1:13,3:16:0.93:65,0,1	1/1:5,0:5:1.83:12,2,0	1/1:8,0:5:1.76:4,2,0	1/1:4,0:4:3.54:7,4,0
chr10	7607982	.	CT	C	1492.68	PASS	AB=0.861;AC=30;AF=0.556;AN=54;BaseQRankSum=1.332;DP=496;FS=4.240;HRun=2;HaplotypeScore=147.9628;InbreedingCoeff=0.4457;MQ=54.23;MQ0=28;MQRankSum=-4.440;QD=5.63;ReadPosRankSum=-3.905;VQSLOD=-0.7508;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:35,1:35:49.67:0,50,682	0/1:12,1:13:61.89:119,0,62	0/0:26,0:11:16.62:0,17,179	0/0:35,0:17:38.62:0,39,406	0/1:7,7:10:12.60:21,0,13	0/1:24,5:28:70.28:70,0,448	0/0:20,2:22:8.95:0,9,403	1/1:3,2:3:3.95:40,4,0	0/0:19,0:19:41.79:0,42,440	1/1:21,0:21:18.20:158,18,0	1/1:4,4:6:6.01:62,6,0	1/1:13,7:17:11.78:144,12,0	1/1:10,8:16:20.64:245,21,0	1/1:9,3:10:5.83:38,6,0	0/1:20,0:19:4.13:4,0,7	0/1:17,2:19:34.02:59,0,34	0/0:21,1:22:48.45:0,48,432	0/1:10,3:8:22.81:64,0,23	0/0:27,0:26:61.01:0,61,609	0/0:21,0:21:10.35:0,10,264	./.	1/1:6,4:7:3.01:38,3,0	1/1:12,4:16:9.47:91,9,0	1/1:9,14:17:6.02:76,6,0	0/0:17,1:18:9.70:0,10,259	1/1:4,4:8:18.51:205,19,0	1/1:7,5:9:15.01:169,15,0	1/1:2,2:4:9.13:80,9,0
chr10	7608024	.	TCC	T	2747.81	PASS	AB=0.933;AC=23;AF=0.411;AN=56;BaseQRankSum=2.078;DP=594;FS=2.383;HRun=3;HaplotypeScore=125.0546;InbreedingCoeff=0.7465;MQ=60.87;MQ0=14;MQRankSum=-0.850;QD=11.12;ReadPosRankSum=-0.269;VQSLOD=0.3169;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:33,2:33:6.60:340,7,0	1/1:9,1:10:20.77:147,21,0	0/0:22,0:12:11.66:0,12,152	0/0:26,0:11:13.33:0,13,202	0/0:30,0:30:66.02:0,66,671	1/1:22,2:23:19.15:223,19,0	1/1:16,1:17:22.50:227,22,0	0/0:24,0:23:54.15:0,54,562	0/1:9,3:12:39.61:161,0,40	0/0:39,0:39:93.92:0,94,1023	0/0:21,0:21:47.99:0,48,504	0/0:22,0:21:41.92:0,42,382	0/0:17,0:16:24.20:0,24,248	0/0:17,0:16:29.98:0,30,290	0/0:25,0:25:41.30:0,41,471	0/0:20,0:20:38.69:0,39,409	1/1:18,2:20:1.74:186,2,0	0/0:18,0:16:41.84:0,42,412	1/1:19,0:17:44.59:369,45,0	1/1:29,0:28:38.34:448,38,0	1/1:9,0:9:8.98:73,9,0	0/0:9,4:13:20.54:0,21,223	0/0:25,0:25:44.52:0,45,435	0/0:28,0:27:36.71:0,37,320	0/1:25,0:25:18.29:197,0,18	1/1:19,0:19:14.36:231,14,0	1/1:22,0:21:28.99:271,29,0	0/1:6,0:5:1.12:84,0,1
chr10	7608139	.	TG	T	8871.55	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=18.196;DP=653;FS=0.000;HRun=4;HaplotypeScore=111.4167;InbreedingCoeff=0.9976;MQ=76.26;MQ0=0;MQRankSum=-1.063;QD=30.70;ReadPosRankSum=2.550;VQSLOD=4.3111;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,39:39:99:1313,111,0	1/1:0,7:7:18.06:216,18,0	0/0:18,0:18:48.16:0,48,656	0/0:13,0:13:36.10:0,36,477	0/0:27,0:27:81.27:0,81,1132	1/1:2,24:26:66.20:791,66,0	1/1:1,19:20:48.15:576,48,0	0/0:26,0:26:75.22:0,75,1003	1/1:1,24:25:72.22:863,72,0	0/0:33,0:33:93.30:0,93,1273	0/0:24,0:24:72.24:0,72,1008	0/0:19,0:19:57.18:0,57,780	0/0:25,0:25:66.22:0,66,923	0/0:26,0:26:63.20:0,63,857	0/0:23,0:23:60.20:0,60,839	0/0:23,0:23:66.17:0,66,885	1/1:1,21:22:51.16:612,51,0	0/0:21,0:21:63.21:0,63,881	1/1:2,13:15:36.11:432,36,0	1/1:2,31:33:93.13:1053,93,0	1/1:4,19:23:51.16:612,51,0	0/0:32,0:32:90.29:0,90,1243	0/0:20,0:20:54.18:0,54,756	0/0:34,0:34:96.26:0,96,1304	1/1:1,25:26:69.21:828,69,0	1/1:3,21:24:18.22:604,18,0	1/1:0,19:19:54.17:648,54,0	1/1:1,9:10:27.08:324,27,0
chr10	7609193	.	G	GGTGTGT	13490.97	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=0.104;DP=734;FS=6.314;HRun=0;HaplotypeScore=224.0536;InbreedingCoeff=0.7301;MQ=65.76;MQ0=4;MQRankSum=-1.736;QD=20.69;ReadPosRankSum=2.307;VQSLOD=3.3831;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:43:2.11:68,2,0	1/1:4,7:13:20.15:681,20,0	0/0:37,0:28:17.74:0,18,242	0/0:44,0:28:32.84:0,33,556	1/1:25,0:25:14.76:313,15,0	1/1:9,5:20:18.06:389,18,0	1/1:15,10:30:21.07:559,21,0	1/1:32,0:31:33.04:738,33,0	1/1:11,21:36:38.30:1104,38,0	1/1:24,0:24:47.75:940,48,0	1/1:23,0:23:8.73:105,9,0	1/1:10,10:24:6.93:419,7,0	1/1:5,9:22:23.81:658,24,0	1/1:12,9:26:20.68:442,21,0	1/1:37,0:37:53.88:1256,54,0	1/1:32,0:34:48.41:966,48,0	1/1:15,0:23:11.63:459,12,0	1/1:23,1:24:29.99:614,30,0	1/1:15,3:19:23:418,23,0	1/1:13,11:28:30.10:799,30,0	1/1:32,0:31:11.91:177,12,0	1/1:8,4:14:12.04:330,12,0	1/1:8,8:19:18.06:408,18,0	1/1:17,11:32:8.77:174,9,0	1/1:8,7:16:9.03:292,9,0	1/1:21,0:20:33.02:620,33,0	1/1:25,0:24:32.91:432,33,0	1/1:8,0:7:10.28:131,10,0
chr10	7609225	.	TGA	T	2523.13	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=1.933;DP=714;FS=2.039;HRun=0;HaplotypeScore=190.7107;InbreedingCoeff=0.9728;MQ=58.87;MQ0=8;MQRankSum=-3.126;QD=14.10;ReadPosRankSum=4.136;VQSLOD=3.5212;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:38.92:0,39,647	0/0:14,0:14:30.85:0,31,507	0/0:41,0:25:31.11:0,31,647	0/0:56,0:37:81.49:0,81,1176	1/1:10,6:16:14.62:141,15,0	0/0:18,0:18:36.12:0,36,587	0/0:31,0:31:54.09:0,54,909	1/1:19,9:27:42.12:552,42,0	0/0:32,0:33:57.19:0,57,880	1/1:12,16:28:40.93:669,41,0	1/1:12,6:18:17.38:226,17,0	0/0:25,0:24:38.52:0,39,590	0/0:25,0:25:54.63:0,55,881	0/0:21,0:21:42.14:0,42,715	1/1:22,18:40:56.19:555,56,0	1/1:29,5:34:32.63:248,33,0	0/0:23,0:23:42.05:0,42,684	1/1:11,4:15:15.65:329,16,0	0/0:10,0:10:24.08:0,24,384	0/0:29,0:29:68.86:0,69,1064	0/0:31,0:28:51.03:0,51,678	0/0:16,0:16:32.99:0,33,509	0/0:20,0:20:44.64:0,45,722	0/0:34,0:34:42.57:0,43,676	0/0:17,0:17:27.06:0,27,438	0/0:22,0:21:48.16:0,48,807	0/0:32,0:32:69.23:0,69,1016	0/0:7,0:7:6.02:0,6,95
chr10	7609226	.	G	GTGTGTGTC	5397.67	PASS	AB=0.981;AC=25;AF=0.446;AN=56;BaseQRankSum=10.689;DP=686;FS=1.688;HRun=0;HaplotypeScore=246.6621;InbreedingCoeff=-0.4017;MQ=61.26;MQ0=8;MQRankSum=-10.800;QD=11.32;ReadPosRankSum=0.608;VQSLOD=3.9030;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:26.58:0,27,742	0/1:14,0:14:99:133,0,280	0/0:42,0:26:42.42:0,42,1182	0/0:58,0:39:93:0,93,1904	0/1:10,2:14:1.07:172,0,1	0/1:18,0:18:70.41:70,0,462	0/1:33,0:33:21.56:22,0,924	0/1:25,0:24:16.64:599,0,17	0/1:32,0:33:99:159,0,578	0/1:22,3:25:63.14:640,0,63	0/1:12,0:12:12.76:63,0,13	0/1:25,0:24:78.16:78,0,400	0/1:26,0:26:99:107,0,744	0/0:21,0:21:3.93:0,4,682	1/1:27,7:37:1.59:1255,2,0	1/1:10,14:30:17.26:1158,17,0	0/1:23,0:23:99:301,0,495	1/1:11,1:12:2.11:266,2,0	0/1:11,0:11:62.81:63,0,360	0/1:29,0:30:85.56:86,0,741	0/1:28,0:25:99:134,0,367	0/1:18,0:18:7.96:8,0,419	0/1:21,0:21:17.49:17,0,611	0/0:34,0:34:17.98:0,18,645	0/1:17,0:17:19.28:19,0,392	0/1:21,0:20:11.31:11,0,631	0/0:23,0:23:69.17:0,69,920	0/1:4,0:4:34.98:35,0,38
chr10	7610223	.	AT	A	8179.82	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=15.188;DP=792;FS=0.948;HRun=1;HaplotypeScore=75.0338;InbreedingCoeff=0.9987;MQ=80.46;MQ0=0;MQRankSum=-2.325;QD=38.58;ReadPosRankSum=2.340;VQSLOD=5.5512;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,160,2515	1/1:0,12:12:36.12:503,36,0	0/0:13,0:14:38.55:0,39,514	0/0:25,0:25:75.24:0,75,1156	0/0:30,0:30:90.29:0,90,1412	1/1:0,28:28:69.23:965,69,0	1/1:0,34:34:96.32:1342,96,0	0/0:41,0:41:99:0,123,1945	1/1:0,41:41:99:1594,114,0	0/0:32,0:32:90.29:0,90,1414	0/0:27,0:27:81.24:0,81,1226	0/0:21,0:21:63.21:0,63,1007	0/0:26,0:26:75.26:0,75,1199	0/0:25,0:25:75.26:0,75,1194	0/0:32,0:32:93.32:0,93,1484	0/0:19,1:20:18.22:0,18,801	1/1:0,26:26:72.24:1007,72,0	0/0:26,0:26:78.27:0,78,1247	1/1:0,17:17:51.17:713,51,0	1/1:0,32:32:87.29:1216,87,0	0/0:44,0:44:99:0,132,2057	0/0:37,0:37:99:0,105,1624	0/0:27,0:27:81.24:0,81,1246	0/0:27,0:27:75.21:0,75,1149	1/1:0,22:22:60.20:839,60,0	0/0:26,0:26:78.26:0,78,1226	0/0:31,0:29:93.32:0,93,1483	0/0:15,0:15:45.15:0,45,712
chr10	7610655	.	GACACAC	G	1784.78	PASS	AB=0.901;AC=27;AF=0.500;AN=54;BaseQRankSum=-1.653;DP=682;FS=2.379;HRun=0;HaplotypeScore=220.5820;InbreedingCoeff=0.2800;MQ=53.76;MQ0=12;MQRankSum=-2.576;QD=4.46;ReadPosRankSum=0.066;VQSLOD=2.7630;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:31,1:34:3:25,3,0	1/1:4,1:6:3.01:57,3,0	./.	0/0:30,0:17:2.94:0,3,18	0/0:23,0:22:2.49:0,2,6	1/1:15,1:17:3.89:52,4,0	0/1:20,3:23:36.20:169,0,36	0/1:29,0:25:6.78:7,0,32	1/1:22,6:30:17.70:156,18,0	0/1:22,0:23:75.12:82,0,75	0/1:11,0:15:0:1,0,0	0/0:20,0:22:29.25:0,29,414	0/0:19,0:19:30.04:0,30,622	0/0:24,0:23:9.02:0,9,170	0/1:25,0:31:21.60:35,0,22	0/1:28,0:31:7.66:46,0,8	1/1:14,7:21:6.02:123,6,0	0/0:14,0:14:11.29:0,11,83	1/1:14,1:13:9.03:183,9,0	0/0:20,6:23:1.88:0,2,23	0/1:39,0:35:12.89:90,0,13	0/0:21,0:21:5.74:0,6,126	0/0:18,0:18:0:0,0,0	0/0:44,0:43:53.95:0,54,1195	1/1:13,9:24:0.83:72,1,0	1/1:17,6:22:24.76:485,25,0	1/1:11,8:20:15.94:309,16,0	1/1:11,0:12:5.85:56,6,0
chr10	7610688	.	A	ACG	242.87	PASS	AB=0.959;AC=10;AF=0.179;AN=56;BaseQRankSum=-1.411;DP=754;FS=0.000;HRun=0;HaplotypeScore=231.0184;InbreedingCoeff=-0.0910;MQ=37.30;MQ0=42;MQRankSum=1.758;QD=0.89;ReadPosRankSum=-1.874;VQSLOD=2.2138;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:32,2:32:7.06:7,0,102	1/1:8,0:8:2.54:28,3,0	0/0:28,0:7:5.49:0,5,138	0/0:22,0:7:17.91:0,18,143	0/0:31,0:26:14.71:0,15,108	0/1:21,0:16:13.21:13,0,52	0/1:36,2:35:47.10:47,0,219	0/0:49,0:36:78.75:0,79,695	0/1:37,1:37:75.80:76,0,123	0/0:27,0:24:64.32:0,64,502	0/0:16,0:16:5.97:0,6,46	0/0:28,0:27:41.26:0,41,433	0/0:30,0:30:60.22:0,60,555	0/0:28,0:25:17.95:0,18,181	0/0:33,0:32:13.52:0,14,114	0/0:35,0:34:22.60:0,23,157	0/0:20,0:18:22.43:0,22,183	0/0:12,0:10:20.19:0,20,143	0/1:21,1:14:51.38:51,0,189	0/0:20,1:17:6.42:0,6,45	0/1:48,2:38:40.93:41,0,152	0/0:27,0:24:20.89:0,21,211	0/0:13,0:13:5.88:0,6,49	0/0:38,0:36:65.98:0,66,775	0/1:28,1:29:15.74:16,0,67	0/1:30,2:27:99:101,0,220	0/0:15,0:16:3.20:0,3,114	0/0:7,0:6:9.37:0,9,61
chr10	7610754	.	TCA	T	73.75	PASS	AB=0.888;AC=16;AF=0.286;AN=56;BaseQRankSum=6.135;DP=504;FS=1.096;HRun=0;HaplotypeScore=201.0961;InbreedingCoeff=0.2801;MQ=40.91;MQ0=11;MQRankSum=-2.202;QD=0.55;ReadPosRankSum=0.115;VQSLOD=2.3577;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:14,3:16:3.87:25,4,0	0/1:6,2:8:16.50:17,0,88	0/0:30,0:17:42.86:0,43,699	0/0:35,0:13:26.08:0,26,401	0/0:6,2:6:2.91:0,3,17	0/1:6,3:5:0.02:0,0,0	0/0:10,0:10:5.60:0,6,51	0/0:14,0:14:32.32:0,32,530	1/1:9,3:11:0.13:2,0,0	0/1:17,0:13:10.74:11,0,154	0/0:6,1:7:2.36:0,2,8	0/0:40,0:40:71.77:0,72,1430	0/0:29,0:29:59.68:0,60,1078	0/0:25,0:25:35.83:0,36,717	0/0:14,3:16:5.47:0,5,34	0/1:19,2:20:4.08:4,0,41	0/1:8,0:7:4.19:10,0,4	0/0:6,0:4:7.58:0,8,126	0/0:6,0:5:5.86:0,6,117	0/0:11,0:10:3:0,3,39	0/0:24,1:19:0.47:0,0,1	0/0:31,0:31:44.28:0,44,890	0/0:30,0:30:32.90:0,33,586	0/0:45,0:45:66.21:0,66,1318	1/1:15,1:15:2.67:12,3,0	0/1:16,3:16:60:60,0,223	1/1:3,0:3:1.49:23,1,0	1/1:3,2:5:5.71:47,6,0
chr10	7610787	.	ACACACT	A	1679.36	PASS	AB=0.853;AC=30;AF=0.536;AN=56;BaseQRankSum=3.087;DP=538;FS=18.285;HRun=0;HaplotypeScore=215.4475;InbreedingCoeff=0.2400;MQ=34.63;MQ0=39;MQRankSum=-7.122;QD=5.12;ReadPosRankSum=-2.685;VQSLOD=0.8875;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:10,5:14:3.71:54,4,0	0/1:5,4:9:38.37:145,0,38	0/1:12,0:5:0.19:1,0,0	0/0:23,0:4:0.35:0,0,0	0/0:5,1:6:0:0,0,0	0/0:7,1:6:1.42:0,1,5	0/1:12,2:12:6.84:61,0,7	1/1:40,0:18:10.09:409,10,0	1/1:7,0:6:1.70:6,2,0	1/1:12,2:8:6.72:228,7,0	0/1:4,3:7:0.34:1,0,0	0/0:36,0:34:44.73:0,45,748	0/1:24,0:23:24.72:25,0,565	0/1:28,0:28:23.77:24,0,614	0/1:8,2:10:0.01:1,0,0	1/1:11,6:16:5.87:69,6,0	0/1:4,4:8:21.93:64,0,22	1/1:6,2:7:14.65:170,15,0	1/1:14,0:4:3.92:14,4,0	1/1:7,5:12:9.01:168,9,0	0/1:50,4:35:0:1,0,0	0/0:40,0:39:29.28:0,29,604	0/0:37,0:35:29.35:0,29,733	0/0:44,0:42:44.80:0,45,810	0/0:11,5:15:1.25:0,1,5	0/1:19,5:12:99:242,0,130	1/1:5,1:5:5.92:30,6,0	1/1:3,2:5:11.11:118,11,0
chr10	7610793	.	T	TCA	1269.65	PASS	AB=0.962;AC=38;AF=0.679;AN=56;BaseQRankSum=2.755;DP=555;FS=6.938;HRun=0;HaplotypeScore=218.5148;InbreedingCoeff=0.0813;MQ=33.76;MQ0=42;MQRankSum=-2.508;QD=2.45;ReadPosRankSum=2.771;VQSLOD=1.9024;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:13,2:13:8.29:10,0,8	1/1:9,1:10:10.58:75,11,0	0/0:7,0:1:2.04:0,2,6	0/0:23,0:6:2.12:0,2,38	0/0:5,0:6:0:0,0,0	0/1:6,1:5:0.01:0,0,0	1/1:14,1:13:5.72:35,6,0	0/1:42,0:17:17.23:90,0,17	1/1:12,1:11:8.12:84,8,0	1/1:16,0:10:14.48:139,14,0	0/1:9,0:9:0.03:0,0,1	0/1:36,0:34:10.09:10,0,112	0/1:24,0:23:30.97:31,0,96	0/1:27,0:27:1.52:2,0,54	1/1:10,2:12:0.43:2,0,0	1/1:13,3:15:11.12:104,11,0	1/1:8,0:8:7.77:31,8,0	1/1:7,2:8:5.74:138,6,0	1/1:15,1:4:6.02:91,6,0	1/1:13,1:14:8.26:40,8,0	1/1:40,15:39:0.18:1,0,0	0/1:38,0:37:15.99:16,0,37	0/1:37,0:35:15.46:15,0,32	0/1:39,0:37:1.22:1,0,46	0/1:15,2:17:0:0,0,0	0/1:25,2:15:20.72:127,0,21	1/1:6,1:7:14.96:154,15,0	1/1:4,2:6:15.04:208,15,0
chr10	7610795	.	ACACACT	A	635.90	PASS	AB=0.970;AC=29;AF=0.518;AN=56;BaseQRankSum=3.753;DP=559;FS=0.000;HRun=0;HaplotypeScore=227.2616;InbreedingCoeff=-0.0228;MQ=33.64;MQ0=43;MQRankSum=-5.818;QD=1.65;ReadPosRankSum=-2.568;VQSLOD=1.9069;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:13:5.69:36,6,0	0/1:10,0:10:22.14:22,0,71	0/0:7,0:1:1.55:0,2,4	0/1:22,0:5:13.69:14,0,82	0/0:8,0:7:0:0,0,1	0/0:8,0:6:0.66:0,1,3	1/1:15,0:13:5.93:54,6,0	0/1:41,0:16:13.67:14,0,110	1/1:13,0:11:4.27:21,4,0	0/1:16,0:10:18.48:46,0,18	0/1:9,0:9:0.34:1,0,0	0/0:32,4:34:35.21:0,35,511	0/1:20,4:23:99:127,0,450	0/1:20,7:27:99:105,0,381	0/1:12,0:12:0.01:1,0,0	0/1:16,0:15:7.34:17,0,7	0/1:8,0:8:22.93:33,0,23	1/1:9,0:8:7.27:63,7,0	0/1:16,0:5:22.32:22,0,28	1/1:15,0:15:5.58:51,6,0	1/1:56,0:39:2.74:13,3,0	0/0:29,9:37:25.82:0,26,497	0/0:28,9:35:26.35:0,26,521	0/0:38,1:37:38.77:0,39,607	1/1:18,0:17:2.03:7,2,0	0/1:28,0:16:57.04:57,0,152	0/1:9,0:8:25.54:26,0,65	1/1:6,0:6:13.29:61,13,0
chr10	7610801	.	T	TCA	3417.57	PASS	AB=0.978;AC=42;AF=0.778;AN=54;BaseQRankSum=-2.468;DP=554;FS=8.860;HRun=0;HaplotypeScore=215.1941;InbreedingCoeff=-0.0191;MQ=31.33;MQ0=41;MQRankSum=1.293;QD=6.35;ReadPosRankSum=3.390;VQSLOD=1.9391;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:16,0:14:5.11:33,0,5	0/1:9,1:10:13.98:55,0,14	./.	0/1:24,0:3:5.19:5,0,34	0/0:9,0:8:0:0,0,1	1/1:9,0:7:0.60:2,1,0	1/1:14,2:14:7.12:59,7,0	0/1:39,0:15:48.32:61,0,48	1/1:12,0:10:7.93:38,8,0	1/1:12,0:6:10.74:63,11,0	0/1:11,0:11:0.05:0,0,1	1/1:21,11:31:22.30:364,22,0	1/1:22,4:25:35.33:501,35,0	1/1:16,7:24:25.64:356,26,0	0/1:11,0:11:0.38:0,0,1	1/1:14,0:13:10.71:62,11,0	0/1:6,0:6:7.81:36,0,8	1/1:9,0:8:3.99:103,4,0	0/1:18,0:8:25.76:26,0,26	1/1:14,1:16:5.56:72,6,0	1/1:56,0:38:2.70:16,3,0	1/1:28,13:39:22.99:384,23,0	1/1:24,13:35:22.29:387,22,0	1/1:21,15:35:35.98:561,36,0	1/1:17,1:17:2.36:11,2,0	0/1:25,1:15:45.87:134,0,46	0/1:9,0:9:12.44:12,0,72	1/1:6,0:6:13.93:75,14,0
chr10	7610804	.	C	CATAT	2685.67	PASS	AB=0.803;AC=26;AF=0.464;AN=56;BaseQRankSum=-1.060;DP=596;FS=8.155;HRun=0;HaplotypeScore=239.5395;InbreedingCoeff=-0.0586;MQ=32.66;MQ0=43;MQRankSum=-3.503;QD=7.38;ReadPosRankSum=-2.882;VQSLOD=1.2468;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:10,6:14:11.45:68,0,11	0/1:10,2:12:90.56:125,0,91	0/0:10,0:2:2.52:0,3,48	0/0:29,0:4:6.85:0,7,74	0/1:8,3:10:0.01:1,0,0	1/1:6,6:9:2.72:55,3,0	0/1:16,1:15:30.39:62,0,30	0/1:41,1:16:99:352,0,220	1/1:7,7:12:8.99:241,9,0	1/1:12,1:8:0.12:175,0,0	0/1:6,5:11:0.29:0,0,0	0/0:31,0:29:23.13:0,23,131	0/0:26,0:25:45.26:0,45,283	0/0:23,0:23:25.73:0,26,176	1/1:9,6:15:2.91:52,3,0	0/1:8,7:14:16.32:228,0,16	0/1:5,2:6:37.77:65,0,38	0/1:6,4:9:99:197,0,106	0/1:20,4:10:55.68:363,0,56	0/1:15,4:19:19.09:19,0,22	1/1:42,13:37:2.73:77,3,0	0/0:41,0:38:24.77:0,25,162	0/0:37,0:35:21.51:0,22,126	0/0:35,0:34:34.77:0,35,216	0/1:14,8:22:6.59:18,0,7	0/1:25,4:19:99:243,0,240	0/1:10,3:12:99:257,0,157	1/1:3,3:6:11.16:247,11,0
chr10	7610838	.	CTCA	C	157.30	PASS	AB=0.936;AC=14;AF=0.250;AN=56;BaseQRankSum=3.635;DP=591;FS=14.870;HRun=0;HaplotypeScore=247.7947;InbreedingCoeff=-0.0404;MQ=39.55;MQ0=39;MQRankSum=-0.266;QD=0.58;ReadPosRankSum=-2.718;VQSLOD=0.6422;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:14,3:17:1.76:0,2,17	0/0:11,1:14:7.94:0,8,109	0/0:50,0:6:11.36:0,11,222	0/1:68,0:10:19.69:20,0,166	0/1:16,2:17:0.28:0,0,1	0/1:12,1:12:19.11:19,0,82	0/1:12,1:13:9.76:10,0,72	0/0:23,0:17:48.15:0,48,1135	0/0:16,3:17:9.46:0,9,226	0/1:17,1:16:49.45:49,0,567	1/1:14,1:16:1.42:6,1,0	0/0:16,0:15:10.27:0,10,315	0/0:11,0:11:4.46:0,4,411	0/0:14,0:14:11.80:0,12,132	0/1:19,2:22:16.98:17,0,77	0/0:13,2:17:9.29:0,9,374	0/0:4,1:6:5.85:0,6,122	0/1:7,3:10:84.64:85,0,227	0/0:18,0:10:27.09:0,27,658	0/0:17,0:18:7.78:0,8,102	0/0:42,0:32:5.34:0,5,91	0/1:38,2:36:0.02:1,0,0	1/1:19,1:18:2.69:17,3,0	0/0:10,1:11:2.37:0,2,20	0/1:23,0:25:39.19:39,0,69	0/0:19,0:16:10.66:0,11,521	0/0:15,1:17:30.36:0,30,483	0/1:3,0:5:29.14:29,0,205
chr10	7610854	.	A	ACACACT	3770.58	PASS	AB=0.892;AC=32;AF=0.571;AN=56;BaseQRankSum=-5.094;DP=651;FS=11.966;HRun=0;HaplotypeScore=257.8691;InbreedingCoeff=-0.0411;MQ=32.56;MQ0=42;MQRankSum=-1.053;QD=7.56;ReadPosRankSum=1.603;VQSLOD=1.1421;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:19,1:18:0.01:0,0,0	1/1:10,2:12:2.79:57,3,0	0/0:37,0:2:5.93:0,6,86	0/0:47,0:6:6.02:0,6,81	0/1:17,9:25:0.02:0,0,1	1/1:10,7:15:5.71:189,6,0	0/1:22,3:21:8.52:156,0,9	0/1:31,0:19:94.76:284,0,95	0/1:19,6:23:8.38:119,0,8	1/1:30,3:25:18.89:617,19,0	1/1:13,8:21:2.74:47,3,0	0/1:14,0:13:59:59,0,116	0/1:14,0:14:26.60:50,0,27	0/0:18,0:16:0.18:0,0,0	0/1:21,6:25:16.78:18,0,17	1/1:21,3:22:16.30:362,16,0	0/0:6,1:7:0.47:0,0,1	0/1:15,2:16:11.37:204,0,11	1/1:18,0:7:9.03:198,9,0	1/1:18,5:22:8.33:183,8,0	1/1:41,0:27:2.78:38,3,0	0/0:43,0:39:2.44:0,2,14	0/1:18,0:16:0.02:0,0,0	0/1:15,0:15:0.02:0,0,0	0/1:17,8:22:8.88:68,0,9	0/1:23,3:21:99:516,0,166	0/1:15,7:22:66.86:435,0,67	1/1:4,0:4:5.85:174,6,0
chr10	7610855	.	C	CAT	148.99	PASS	AB=0.945;AC=13;AF=0.241;AN=54;BaseQRankSum=0.834;DP=658;FS=0.000;HRun=0;HaplotypeScore=254.0543;InbreedingCoeff=-0.0432;MQ=30.88;MQ0=42;MQRankSum=0.146;QD=0.52;ReadPosRankSum=1.920;VQSLOD=2.4035;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:20,0:18:0:0,0,0	0/0:12,0:12:0.02:0,0,14	0/1:36,0:2:0.07:0,0,41	0/0:44,0:5:5.91:0,6,62	0/1:23,4:26:0.01:0,0,0	0/1:18,0:16:4.60:5,0,13	0/0:26,0:21:14.02:0,14,82	0/0:30,0:19:42.23:0,42,350	0/1:21,5:24:7.82:22,0,8	0/1:34,1:26:81.41:81,0,151	0/1:20,1:21:0:1,0,0	0/0:14,0:13:15.92:0,16,163	0/0:15,0:15:23.77:0,24,193	0/0:18,0:16:2.91:0,3,18	0/0:26,2:25:2.35:0,2,33	0/1:21,5:24:39.17:39,0,47	0/0:7,0:7:1.18:0,1,3	0/1:16,0:15:2.79:3,0,111	0/0:15,0:4:9.36:0,9,61	0/0:23,1:23:3.47:0,3,10	0/0:40,1:27:2.73:0,3,14	0/0:44,0:39:5.11:0,5,58	./.	1/1:15,0:15:0.47:1,0,0	0/0:24,1:22:2.88:0,3,21	0/1:26,1:22:41.52:42,0,200	0/1:21,1:22:64.37:64,0,111	0/0:5,0:5:4.30:0,4,22
chr10	7610861	.	CAT	C	1097.61	PASS	AB=0.959;AC=33;AF=0.589;AN=56;BaseQRankSum=1.541;DP=645;FS=0.000;HRun=0;HaplotypeScore=236.9501;InbreedingCoeff=-0.0487;MQ=30.70;MQ0=42;MQRankSum=1.268;QD=2.02;ReadPosRankSum=0.284;VQSLOD=2.4344;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:21,1:20:0.01:0,0,0	1/1:10,0:10:2.94:18,3,0	0/0:28,0:2:3.01:0,3,58	0/0:37,0:4:5.58:0,6,33	1/1:27,0:27:2.39:16,2,0	0/1:19,0:17:10.57:11,0,18	0/1:29,2:24:27.84:43,0,28	0/1:29,0:15:35.87:36,0,234	0/1:24,3:25:22.71:23,0,23	0/1:32,2:25:78.83:79,0,189	0/1:21,1:22:0:0,0,0	1/1:12,0:12:10.64:110,11,0	1/1:16,0:15:22.83:141,23,0	0/0:13,0:11:1.24:0,1,3	1/1:27,4:26:6.60:45,7,0	1/1:24,2:22:18.76:149,19,0	0/0:6,1:8:2.22:0,2,7	0/1:13,0:13:29.91:30,0,38	0/1:17,1:6:24.04:60,0,24	1/1:24,2:25:5.85:76,6,0	1/1:40,2:28:2.96:19,3,0	1/1:42,0:38:5.54:43,6,0	0/1:19,0:17:0.06:0,0,0	0/0:14,0:15:0:0,0,0	0/1:21,2:20:1.59:14,0,2	0/1:25,1:23:99:160,0,111	0/1:21,0:21:50.45:104,0,50	1/1:4,2:6:5.97:60,6,0
chr10	7610863	.	TAC	T	48.88	PASS	AB=0.968;AC=23;AF=0.426;AN=54;BaseQRankSum=3.816;DP=659;FS=6.512;HRun=0;HaplotypeScore=244.4152;InbreedingCoeff=0.1422;MQ=30.79;MQ0=41;MQRankSum=-0.598;QD=0.11;ReadPosRankSum=2.242;VQSLOD=1.9226;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:21,0:20:0.01:0,0,0	0/1:9,0:9:0:0,0,0	0/0:23,0:2:3.01:0,3,50	0/1:33,0:4:0:0,0,0	0/0:28,0:28:3.87:0,4,27	0/0:19,0:17:5.36:0,5,47	0/1:32,0:24:6.61:7,0,74	0/0:33,0:18:37.14:0,37,434	0/1:26,0:25:4.98:5,0,39	0/1:32,2:25:4.93:5,0,464	0/1:22,0:22:0:0,0,0	1/1:17,0:17:8.90:37,9,0	1/1:17,0:16:0.52:5,1,0	0/0:9,4:11:2.97:0,3,21	0/1:33,0:27:6.14:6,0,11	1/1:27,0:22:0.33:19,0,0	0/0:10,0:10:3:0,3,27	0/0:14,0:14:5.50:0,5,144	0/1:22,0:7:8.05:8,0,73	0/1:22,1:24:0.39:15,0,0	./.	1/1:38,5:38:3.16:9,3,0	0/1:18,2:18:0.06:0,0,0	0/0:13,2:16:0:0,0,0	0/1:24,0:21:0.22:1,0,0	0/0:26,0:24:7.91:0,8,307	0/1:18,0:21:29.38:29,0,144	1/1:5,0:5:2.96:22,3,0
chr10	7610874	.	T	TCA	534.75	PASS	AB=0.976;AC=30;AF=0.577;AN=52;BaseQRankSum=-0.694;DP=763;FS=31.802;HRun=0;HaplotypeScore=248.9011;InbreedingCoeff=-0.0728;MQ=29.42;MQ0=56;MQRankSum=5.646;QD=0.85;ReadPosRankSum=-6.300;VQSLOD=-0.1685;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:27,1:26:0.30:2,0,0	1/1:10,0:10:4.41:14,4,0	./.	./.	1/1:33,2:33:16.03:58,16,0	0/1:15,1:13:6.59:7,0,31	0/1:46,1:39:45.56:46,0,97	0/0:41,0:19:21.19:0,21,321	0/1:32,1:31:4.35:52,0,4	0/1:43,1:33:89.09:89,0,345	1/1:17,3:20:2.59:10,3,0	0/0:17,1:18:11.27:0,11,77	0/1:21,0:18:6.19:6,0,39	0/1:13,0:10:0:0,0,0	0/1:40,0:34:8.08:39,0,8	0/1:30,0:25:8.19:13,0,8	1/1:12,1:13:0.52:42,1,0	0/1:14,2:16:52.09:52,0,97	0/1:22,1:6:4.70:5,0,70	1/1:27,4:30:6.33:39,6,0	1/1:64,7:52:2.39:24,2,0	0/1:48,0:43:1:1,0,3	0/0:22,0:17:0:0,0,0	0/0:21,0:20:0.34:0,0,1	1/1:22,0:19:7.49:28,7,0	0/1:29,2:25:99:126,0,368	0/1:20,0:20:5.04:5,0,192	0/1:13,0:13:1.40:8,0,1
chr10	7610882	.	TCA	T	1158.88	PASS	AB=0.935;AC=29;AF=0.558;AN=52;BaseQRankSum=-3.953;DP=792;FS=0.600;HRun=0;HaplotypeScore=258.9090;InbreedingCoeff=-0.4178;MQ=28.97;MQ0=61;MQRankSum=5.552;QD=1.61;ReadPosRankSum=-3.687;VQSLOD=1.3757;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:25:2.60:14,3,0	1/1:12,0:11:6.88:63,7,0	./.	./.	0/1:36,1:35:10.24:69,0,10	0/1:17,0:13:7:7,0,23	0/1:52,0:44:99:135,0,148	0/0:44,0:20:46.73:0,47,524	0/1:34,0:32:20.43:32,0,20	0/1:48,0:36:73.48:73,0,331	0/1:22,0:22:6.95:34,0,7	0/1:5,14:19:45.06:163,0,45	0/1:14,10:22:58.39:157,0,58	0/0:8,4:9:0:0,0,0	0/1:42,0:36:27.34:36,0,27	0/1:30,0:25:32.61:95,0,33	0/1:13,1:13:9.47:29,0,9	0/1:16,0:16:35.63:36,0,124	0/1:25,0:8:37.30:37,0,42	1/1:32,0:31:0.69:83,1,0	1/1:82,0:59:7.64:67,8,0	1/1:22,28:44:5.80:79,6,0	0/1:17,10:21:0.06:0,0,0	0/1:16,4:20:0.02:0,0,0	0/1:22,0:19:3.31:21,0,3	0/1:30,0:25:26.58:27,0,324	0/1:21,0:21:10.72:11,0,147	0/1:15,0:15:4.42:28,0,4
chr10	7610885	.	C	CAT	191.97	PASS	AB=0.946;AC=12;AF=0.231;AN=52;BaseQRankSum=3.302;DP=825;FS=3.104;HRun=0;HaplotypeScore=268.2095;InbreedingCoeff=-0.1067;MQ=29.55;MQ0=67;MQRankSum=-4.553;QD=0.66;ReadPosRankSum=-1.909;VQSLOD=2.4190;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,1:26:2.91:0,3,41	0/0:13,1:13:9.41:0,9,86	./.	./.	0/0:38,3:39:26.84:0,27,301	0/0:15,1:12:7.74:0,8,91	0/0:51,1:43:29.39:0,29,200	0/0:55,0:22:52.98:0,53,691	0/1:31,1:30:39.11:39,0,90	0/1:52,1:39:5.25:5,0,657	0/0:18,3:21:8.57:0,9,79	0/0:19,0:19:16.39:0,16,125	0/1:24,0:21:9.74:10,0,86	1/1:12,0:9:0.47:1,0,0	0/0:47,0:41:23.42:0,23,271	0/0:30,0:25:22.74:0,23,234	0/1:16,1:16:31.51:32,0,132	0/1:14,1:15:23.81:24,0,222	0/0:24,1:8:11.94:0,12,127	0/1:31,5:35:7.07:7,0,223	0/0:84,0:62:4.97:0,5,153	0/0:50,0:44:4.46:0,4,25	0/1:29,0:23:0.02:0,0,0	0/0:22,0:21:0.10:0,0,0	0/1:24,0:21:4.81:5,0,119	0/1:30,3:28:86.35:86,0,593	0/0:19,0:18:20.24:0,20,305	0/1:12,3:15:99:106,0,102
chr10	7610903	.	TAC	T	295.43	PASS	AB=0.807;AC=8;AF=0.154;AN=52;BaseQRankSum=4.166;DP=861;FS=5.754;HRun=0;HaplotypeScore=226.9881;InbreedingCoeff=0.1359;MQ=31.85;MQ0=72;MQRankSum=-4.596;QD=1.83;ReadPosRankSum=-0.459;VQSLOD=1.3889;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:28:2.63:0,3,35	0/0:16,0:15:18.36:0,18,212	./.	./.	0/0:41,0:39:48.14:0,48,579	0/1:16,0:12:7.97:8,0,26	0/0:50,0:42:28.01:0,28,479	0/0:58,0:17:39.02:0,39,466	0/0:35,0:31:27.97:0,28,372	0/0:60,0:48:62.28:0,62,1088	0/0:21,0:21:15.04:0,15,168	0/1:5,17:22:33.04:212,0,33	0/1:13,7:18:99:101,0,108	0/1:11,3:11:26.60:27,0,27	0/0:46,0:40:41.62:0,42,473	0/0:37,0:32:38.75:0,39,446	0/0:22,0:20:30.09:0,30,382	0/0:18,0:18:21.24:0,21,468	0/0:23,0:9:24.07:0,24,302	0/0:33,0:35:48.59:0,49,582	0/0:92,0:71:20.72:0,21,257	1/1:23,23:41:5.96:60,6,0	0/1:17,12:23:0.11:0,0,0	0/0:20,8:26:2.95:0,3,24	0/0:18,0:16:18.05:0,18,196	0/0:35,0:28:67.68:0,68,897	0/0:16,0:15:33.22:0,33,414	0/1:13,0:13:7.44:7,0,159
chr10	7610950	.	ACG	A	103.88	PASS	AB=0.936;AC=9;AF=0.161;AN=56;BaseQRankSum=4.879;DP=729;FS=14.363;HRun=0;HaplotypeScore=171.7297;InbreedingCoeff=0.0539;MQ=34.83;MQ0=16;MQRankSum=-3.375;QD=0.49;ReadPosRankSum=-4.969;VQSLOD=-0.5066;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:5.56:0,6,81	0/0:12,0:12:20.57:0,21,356	0/1:27,0:6:1.48:1,0,105	0/0:15,0:6:7.02:0,7,184	0/0:36,0:35:38.67:0,39,741	1/1:20,0:16:0.47:2,0,0	0/1:23,0:20:35.69:36,0,103	0/0:35,0:24:69.21:0,69,1233	0/0:33,1:32:0.81:0,1,298	0/0:51,0:46:99:0,124,2195	0/0:17,0:17:15.05:0,15,289	0/0:23,1:23:9.11:0,9,68	0/1:17,4:19:99:139,0,110	0/0:19,0:17:1.20:0,1,55	0/0:40,0:35:30.31:0,30,613	0/0:33,0:29:32.70:0,33,625	0/0:20,0:20:20.51:0,21,498	0/0:16,0:16:30.82:0,31,585	0/1:25,0:15:3.01:3,0,636	0/0:33,0:33:40.72:0,41,712	0/1:52,2:49:7.95:8,0,162	0/0:24,4:26:0:0,0,0	0/1:21,1:20:0:0,0,0	0/1:14,5:18:17.47:22,0,17	0/0:22,0:22:30.10:0,30,571	0/0:31,0:28:28.51:0,29,1106	0/0:15,0:14:10.22:0,10,404	0/0:9,0:9:18.06:0,18,324
chr10	7610960	.	TCACG	T	393.47	PASS	AB=0.859;AC=9;AF=0.167;AN=54;BaseQRankSum=4.677;DP=647;FS=8.588;HRun=0;HaplotypeScore=169.9275;InbreedingCoeff=0.4942;MQ=37.32;MQ0=15;MQRankSum=-3.101;QD=3.17;ReadPosRankSum=-2.221;VQSLOD=1.2617;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:20:1.46:0,1,77	0/0:10,0:10:17.87:0,18,457	0/0:27,0:6:12.86:0,13,186	0/0:18,0:8:17.35:0,17,223	0/0:33,0:32:29.56:0,30,575	1/1:16,0:15:0.47:2,0,0	0/0:16,0:14:5.24:0,5,145	0/0:29,0:19:44.94:0,45,1011	0/1:28,0:26:2.10:2,0,383	0/0:44,0:42:93.83:0,94,2263	0/0:17,0:17:15.05:0,15,393	1/1:10,12:22:11.65:223,12,0	1/1:12,11:22:15.23:277,15,0	0/0:5,8:14:1.20:0,1,3	0/0:34,0:32:30.05:0,30,637	0/0:26,0:26:29.51:0,30,695	0/0:20,0:20:9.55:0,10,378	0/0:15,0:15:32.94:0,33,620	0/0:25,0:17:19.25:0,19,783	0/0:28,0:28:32.14:0,32,721	0/0:43,1:43:9.03:0,9,198	./.	0/1:5,14:19:0:1,0,0	0/0:13,2:17:0.95:0,1,9	0/0:23,0:23:23.86:0,24,525	0/0:26,0:25:10.10:0,10,675	0/1:14,0:13:7.01:7,0,203	0/0:9,0:9:11.93:0,12,214
chr10	7610962	.	ACG	A	211.98	PASS	AB=0.851;AC=10;AF=0.185;AN=54;BaseQRankSum=4.850;DP=633;FS=11.271;HRun=0;HaplotypeScore=160.3057;InbreedingCoeff=0.4237;MQ=37.31;MQ0=15;MQRankSum=-2.281;QD=1.53;ReadPosRankSum=-1.966;VQSLOD=1.7435;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,1:20:2.56:0,3,57	0/0:10,0:10:17.65:0,18,345	0/0:28,0:7:15.45:0,15,215	0/0:19,0:8:8.99:0,9,219	0/0:31,2:32:19.73:0,20,406	1/1:14,1:14:0.47:2,0,0	0/0:16,0:14:5.32:0,5,114	0/0:26,0:17:44.94:0,45,789	0/1:27,0:25:2.14:2,0,270	0/0:41,1:40:45.10:0,45,1652	0/0:16,1:17:15.05:0,15,285	1/1:21,0:21:11.88:109,12,0	1/1:21,2:22:15.80:207,16,0	0/0:12,1:13:2.65:0,3,35	0/0:32,2:32:29.97:0,30,499	0/0:26,1:26:29.70:0,30,521	0/0:17,1:18:2.43:0,2,349	0/1:12,3:15:9.79:10,0,431	0/0:24,0:17:41.61:0,42,691	0/0:27,1:28:32.53:0,33,560	0/0:41,2:42:9.03:0,9,158	./.	0/1:18,0:18:0:0,0,0	0/1:7,8:17:2.28:2,0,19	0/0:22,0:22:13.11:0,13,373	0/0:26,0:24:25.20:0,25,590	0/0:13,1:13:12.96:0,13,251	0/0:9,0:9:11.93:0,12,185
chr10	7610978	.	ACT	A	534.92	PASS	AB=1.000;AC=16;AF=0.286;AN=56;BaseQRankSum=4.418;DP=606;FS=16.750;HRun=0;HaplotypeScore=143.8358;InbreedingCoeff=0.4459;MQ=34.79;MQ0=35;MQRankSum=-1.653;QD=2.48;ReadPosRankSum=1.043;VQSLOD=1.2868;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:16:3.48:0,3,48	0/0:9,0:9:12.47:0,12,117	0/0:18,0:3:9.03:0,9,173	0/0:19,0:7:12.57:0,13,246	0/1:27,0:26:5.72:6,0,88	1/1:15,0:14:2.82:16,3,0	0/0:22,0:20:7.46:0,7,61	0/0:34,0:17:28.47:0,28,503	0/0:23,0:21:14.69:0,15,158	0/0:46,0:42:60.24:0,60,1179	0/0:22,0:22:15.02:0,15,215	1/1:27,0:26:0.18:83,0,0	0/1:27,0:25:14.91:148,0,15	0/1:21,0:19:2.89:3,0,14	0/0:32,0:29:10.63:0,11,247	0/0:21,0:20:21.34:0,21,235	0/0:12,0:12:19.66:0,20,170	0/0:13,0:13:18.14:0,18,282	0/0:21,0:12:24.35:0,24,263	0/0:24,0:24:17.86:0,18,172	1/1:41,1:34:3:25,3,0	0/1:21,0:20:0.01:0,0,0	0/0:20,0:19:0:0,0,0	0/0:18,0:17:2.23:0,2,23	0/0:18,0:18:17.87:0,18,177	1/1:16,7:17:29.75:272,30,0	1/1:5,6:10:1.28:107,1,0	1/1:1,0:1:2.97:20,3,0
chr10	7610980	.	T	TCA	867.77	PASS	AB=0.929;AC=22;AF=0.423;AN=52;BaseQRankSum=2.185;DP=634;FS=0.957;HRun=0;HaplotypeScore=149.0604;InbreedingCoeff=0.1852;MQ=34.01;MQ0=37;MQRankSum=-2.839;QD=2.26;ReadPosRankSum=-0.344;VQSLOD=2.3078;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:18:2.22:0,2,7	1/1:8,0:8:2.73:16,3,0	0/0:18,0:3:8.92:0,9,76	0/0:17,0:7:11.11:0,11,149	0/0:27,0:25:3.21:0,3,13	1/1:15,0:14:2.88:35,3,0	1/1:30,0:28:3.19:15,3,0	0/1:37,0:17:1.53:2,0,180	0/1:24,0:22:15.01:15,0,33	0/1:47,0:43:99:221,0,147	0/0:22,0:22:8.76:0,9,56	1/1:12,18:28:12.43:174,12,0	0/1:18,12:27:9.41:302,0,9	1/1:9,11:18:2.04:6,2,0	0/0:31,0:28:6.62:0,7,51	0/1:20,0:19:16.36:16,0,26	0/1:12,0:12:9.85:10,0,32	0/0:13,0:13:18.67:0,19,154	0/0:17,0:9:2.68:0,3,16	0/0:26,0:26:7.44:0,7,59	0/1:47,0:37:0:0,0,0	./.	0/1:15,10:24:0:0,0,0	0/0:10,5:14:2.66:0,3,12	0/0:21,0:21:6.13:0,6,36	1/1:25,0:18:0.96:167,1,0	1/1:14,0:11:4.22:31,4,0	./.
chr10	7610987	.	CAT	C	872.28	PASS	AB=0.950;AC=24;AF=0.444;AN=54;BaseQRankSum=0.335;DP=651;FS=5.095;HRun=0;HaplotypeScore=144.8649;InbreedingCoeff=-0.2089;MQ=32.13;MQ0=50;MQRankSum=1.675;QD=1.73;ReadPosRankSum=-2.531;VQSLOD=1.8668;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:16:0.81:0,1,2	0/0:6,0:5:2.38:0,2,13	0/0:17,0:3:8.89:0,9,59	0/0:17,0:6:10.26:0,10,157	0/1:26,0:23:8.35:17,0,8	1/1:18,0:16:1.19:3,1,0	1/1:31,1:30:2.72:21,3,0	0/1:43,0:15:33.25:33,0,317	0/1:24,0:22:12.33:12,0,36	0/1:41,5:41:99:317,0,313	0/1:22,5:27:17.12:36,0,17	0/1:30,1:29:9.79:35,0,10	0/0:30,0:27:0.39:0,0,133	1/1:24,1:23:2.93:44,3,0	0/1:27,6:32:12.88:59,0,13	0/1:16,1:16:5.40:39,0,5	0/1:10,0:10:6.65:7,0,58	0/1:11,0:11:2.38:2,0,153	0/1:21,0:7:0.33:16,0,0	0/1:28,0:26:23.19:23,0,49	0/0:47,0:36:5.95:0,6,61	0/1:24,0:23:0.01:0,0,0	0/1:20,3:22:0:0,0,0	0/0:13,0:12:2.99:0,3,24	1/1:22,0:21:5.05:65,5,0	0/1:23,1:18:29.71:214,0,30	0/1:12,0:10:59.17:61,0,59	./.
chr10	7610994	.	ACACT	A	283.85	PASS	AB=0.942;AC=10;AF=0.192;AN=52;BaseQRankSum=1.499;DP=635;FS=7.239;HRun=0;HaplotypeScore=145.9649;InbreedingCoeff=-0.0472;MQ=30.85;MQ0=56;MQRankSum=-1.525;QD=1.21;ReadPosRankSum=-1.332;VQSLOD=2.1275;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:14:1.59:0,2,5	0/0:6,0:5:2.97:0,3,26	0/0:12,0:3:5.99:0,6,79	0/0:14,1:6:8.71:0,9,135	1/1:29,0:26:1.82:23,2,0	0/0:14,0:12:0:0,0,0	0/1:27,1:27:0.29:0,0,1	0/0:52,0:15:31.38:0,31,609	0/0:18,0:18:10.63:0,11,73	0/1:40,5:39:99:184,0,559	0/1:20,5:25:34.91:35,0,83	0/0:29,0:27:11.25:0,11,160	0/0:28,0:24:31.98:0,32,438	0/0:27,0:25:2.70:0,3,16	0/1:29,5:30:8.82:9,0,87	0/0:10,1:10:5.64:0,6,32	0/0:10,0:10:6.06:0,6,83	0/1:12,0:12:25.74:26,0,222	0/1:21,0:6:10.97:11,0,58	0/0:30,0:27:5.51:0,6,99	0/0:53,0:40:5.96:0,6,56	./.	0/0:23,0:21:5.93:0,6,40	0/0:13,0:12:5.44:0,5,46	0/0:20,0:19:5.69:0,6,34	0/1:26,1:18:65.26:65,0,166	0/1:13,0:10:6.01:53,0,6	./.
chr10	7610998	.	T	TCA	893.12	PASS	AB=0.905;AC=20;AF=0.385;AN=52;BaseQRankSum=2.607;DP=664;FS=7.806;HRun=0;HaplotypeScore=143.9165;InbreedingCoeff=0.0859;MQ=30.77;MQ0=56;MQRankSum=-1.606;QD=2.23;ReadPosRankSum=1.108;VQSLOD=1.9426;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:16,0:15:0.01:0,0,0	1/1:5,3:6:2.92:51,3,0	0/0:4,0:2:6.02:0,6,75	0/0:17,0:7:11.70:0,12,119	0/1:21,8:28:6.43:19,0,6	0/1:9,4:12:0.06:0,0,0	0/1:26,1:26:0:0,0,0	0/0:62,0:21:31.06:0,31,549	1/1:13,5:18:7.19:31,7,0	0/1:37,9:40:99:658,0,109	1/1:22,3:26:4.26:40,4,0	0/0:26,1:25:7.58:0,8,79	0/0:29,0:25:16.11:0,16,211	0/1:30,0:28:0.54:1,0,1	0/1:31,3:30:1.68:2,0,3	1/1:9,2:10:2.99:25,3,0	0/1:6,2:9:21.92:31,0,22	0/0:10,0:10:7.20:0,7,82	0/1:23,0:7:16.48:16,0,28	0/0:26,4:28:2.84:0,3,40	0/1:59,0:44:17.61:27,0,18	./.	0/0:22,2:22:5.93:0,6,40	0/0:12,0:12:2.93:0,3,33	0/0:18,3:20:1.49:0,1,4	0/1:32,0:24:68.52:115,0,69	0/1:13,0:10:13.35:13,0,18	./.
chr10	7611005	.	CAT	C	331.78	PASS	AB=0.977;AC=21;AF=0.404;AN=52;BaseQRankSum=2.353;DP=721;FS=0.807;HRun=0;HaplotypeScore=156.7960;InbreedingCoeff=-0.0516;MQ=30.34;MQ0=61;MQRankSum=0.426;QD=0.83;ReadPosRankSum=-3.340;VQSLOD=1.8401;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:18:2.96:19,3,0	1/1:8,0:7:2.22:16,2,0	0/0:5,0:3:9.02:0,9,138	0/0:16,0:6:8.92:0,9,128	0/0:30,1:26:11.66:0,12,72	1/1:11,2:12:0.37:0,0,0	0/1:28,0:27:0.27:0,0,1	0/0:67,0:26:54.17:0,54,940	0/1:24,1:21:24.65:32,0,25	0/1:54,1:44:99:118,0,457	0/1:25,0:25:14.14:14,0,41	0/0:28,0:26:8.81:0,9,117	0/0:29,0:25:31.07:0,31,466	1/1:33,0:29:1.93:8,2,0	0/1:37,3:35:2.37:2,0,36	0/1:14,0:11:18.94:19,0,44	0/1:10,0:10:10.20:82,0,10	0/0:12,0:11:2.30:0,2,211	0/1:28,0:9:25.46:25,0,115	0/1:27,1:26:18.08:18,0,53	0/0:61,3:46:5.97:0,6,72	./.	0/0:24,0:21:6.02:0,6,109	0/0:16,0:16:2.90:0,3,38	1/1:18,0:20:5.96:44,6,0	0/1:37,0:28:64.73:65,0,184	0/1:10,0:8:9.66:10,0,41	./.
chr10	7611007	.	T	TAC	1005.81	PASS	AB=0.972;AC=17;AF=0.327;AN=52;BaseQRankSum=1.531;DP=744;FS=1.642;HRun=0;HaplotypeScore=159.9819;InbreedingCoeff=0.1074;MQ=28.79;MQ0=61;MQRankSum=1.132;QD=3.43;ReadPosRankSum=-3.171;VQSLOD=2.1865;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:20,1:18:2.86:38,3,0	1/1:8,1:8:5.59:38,6,0	0/0:5,0:3:9.03:0,9,118	0/0:14,0:4:6.02:0,6,79	0/1:33,1:29:9.72:10,0,91	0/1:12,0:11:0:0,0,0	0/1:25,2:26:0.01:0,0,0	0/0:69,0:28:54.22:0,54,642	1/1:28,0:24:12.49:120,12,0	0/1:49,5:43:99:470,0,416	0/0:24,2:26:5.58:0,6,78	0/0:28,0:26:5.91:0,6,77	0/0:31,0:26:22.55:0,23,336	0/0:34,0:29:2.13:0,2,11	0/0:39,0:33:9.04:0,9,88	0/1:16,0:13:11.65:12,0,33	0/1:9,0:9:23.04:23,0,61	0/1:11,0:10:20.41:20,0,192	0/0:30,0:10:17.16:0,17,187	0/0:27,3:28:2.86:0,3,40	0/0:66,0:48:4.17:0,4,42	./.	0/0:27,0:24:6.02:0,6,79	0/0:17,0:17:2.93:0,3,36	1/1:14,3:19:6:94,6,0	0/1:35,3:30:99:309,0,141	0/1:10,0:8:15.28:17,0,15	./.
chr10	7611010	.	ACACACT	A	182.55	PASS	AB=0.992;AC=12;AF=0.214;AN=56;BaseQRankSum=3.889;DP=824;FS=7.521;HRun=0;HaplotypeScore=189.3914;InbreedingCoeff=0.0824;MQ=27.67;MQ0=63;MQRankSum=-1.580;QD=0.67;ReadPosRankSum=0.606;VQSLOD=2.3033;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:21,1:18:2.64:17,3,0	1/1:9,1:8:2.30:11,2,0	0/0:5,0:3:9.03:0,9,285	0/0:13,0:3:6.02:0,6,189	0/0:37,0:32:5.70:0,6,199	0/0:12,1:11:0.47:0,0,1	0/0:34,0:31:5.61:0,6,56	0/0:70,0:28:54.36:0,54,1157	0/1:33,0:29:10.02:10,0,67	0/1:60,0:49:99:148,0,1525	0/0:26,0:26:5.95:0,6,132	0/0:29,0:27:5.50:0,5,119	0/0:36,0:28:36.12:0,36,499	0/0:34,0:29:2.20:0,2,8	0/1:44,0:38:10.12:10,0,176	0/0:19,0:16:1.09:0,1,276	0/1:12,0:12:14.65:15,0,55	0/0:12,0:11:27.98:0,28,625	0/1:40,1:16:17.37:17,0,363	0/0:42,1:37:3.82:0,4,148	0/0:73,1:55:4.73:0,5,109	0/0:34,0:26:0:0,0,0	0/0:27,0:24:6.02:0,6,182	0/0:17,0:17:2.60:0,3,52	0/0:24,3:25:8.77:0,9,149	0/1:40,1:30:43.34:43,0,556	1/1:10,0:8:8.99:45,9,0	0/0:1,0:1:2.04:0,2,6
chr10	7611034	.	T	TCA	568.43	PASS	AB=0.993;AC=17;AF=0.304;AN=56;BaseQRankSum=-3.191;DP=919;FS=1.245;HRun=0;HaplotypeScore=203.9957;InbreedingCoeff=-0.1682;MQ=29.53;MQ0=45;MQRankSum=-0.603;QD=1.00;ReadPosRankSum=-0.327;VQSLOD=1.9627;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,1:24:5.76:0,6,75	0/0:13,0:11:12.48:0,12,123	0/0:12,0:4:5.91:0,6,53	0/0:16,0:3:8.59:0,9,67	0/1:36,0:31:24.19:24,0,71	0/0:13,0:12:0.41:0,0,1	0/0:42,0:38:14.68:0,15,150	0/1:68,0:38:59.86:172,0,60	0/1:47,1:44:20.42:20,0,261	0/1:71,0:59:57.38:57,0,872	0/1:24,0:24:26.58:27,0,27	1/1:25,3:26:5.39:55,5,0	0/1:33,2:29:39.92:151,0,40	0/1:37,0:32:0.03:1,0,0	0/1:56,0:45:57.02:57,0,57	0/1:25,0:22:31.68:40,0,32	0/0:21,0:21:31.60:0,32,257	0/1:17,0:16:20.28:20,0,123	0/1:42,0:20:29.19:29,0,186	0/0:44,0:37:14.41:0,14,186	0/0:80,0:66:15.31:0,15,155	1/1:36,1:28:2.72:12,3,0	0/0:31,0:28:5.97:0,6,51	0/0:17,0:14:0:0,0,1	0/0:27,0:25:9.03:0,9,114	0/1:34,0:29:28.54:29,0,471	0/1:12,0:9:21.08:21,0,61	0/0:4,0:4:2.97:0,3,20
chr10	7611042	.	TCA	T	5050.30	PASS	AB=0.771;AC=36;AF=0.667;AN=54;BaseQRankSum=0.481;DP=908;FS=9.984;HRun=0;HaplotypeScore=200.3748;InbreedingCoeff=-0.0279;MQ=30.91;MQ0=43;MQRankSum=2.710;QD=6.26;ReadPosRankSum=-0.764;VQSLOD=3.5069;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,11:24:8.97:98,9,0	1/1:3,9:10:14.96:174,15,0	0/0:13,0:3:3.01:0,3,39	0/0:15,0:2:3.01:0,3,51	1/1:25,11:32:0.14:133,0,0	0/0:4,6:9:0.47:0,0,1	0/1:34,14:44:30.53:66,0,31	0/1:59,1:35:22.10:22,0,125	1/1:15,32:43:48.71:595,49,0	0/1:42,28:62:36.10:1012,0,36	1/1:16,8:24:1.62:37,2,0	1/1:26,3:29:2.59:38,3,0	1/1:26,6:25:5.57:163,6,0	0/1:30,4:31:0.21:0,0,0	1/1:48,7:44:0.34:103,0,0	0/1:22,6:25:28.10:100,0,28	1/1:7,13:20:28.87:420,29,0	0/1:16,3:20:13.51:154,0,14	1/1:25,13:18:33.09:402,33,0	1/1:15,30:40:22.35:249,22,0	0/1:49,20:63:5.59:289,0,6	0/0:27,7:28:0.26:0,0,1	./.	0/1:13,2:13:0:0,0,0	1/1:4,25:27:14.81:187,15,0	1/1:9,21:25:0.78:617,1,0	0/1:5,5:9:18.54:160,0,19	0/1:1,5:6:8.51:33,0,9
chr10	7611053	.	CAT	C	1756.95	PASS	AB=0.984;AC=22;AF=0.407;AN=54;BaseQRankSum=7.818;DP=937;FS=3.450;HRun=0;HaplotypeScore=226.9636;InbreedingCoeff=-0.3195;MQ=33.34;MQ0=53;MQRankSum=-0.963;QD=2.35;ReadPosRankSum=6.772;VQSLOD=2.0778;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:35,2:34:8.56:9,0,98	1/1:11,0:9:13.27:76,13,0	0/0:10,0:1:3.01:0,3,54	0/0:12,0:1:3.01:0,3,57	0/1:42,1:38:53.48:53,0,131	0/0:12,0:11:9.33:0,9,73	0/1:44,0:39:37.73:38,0,51	0/0:65,0:41:99:0,103,804	1/1:50,0:45:18.44:256,18,0	0/1:74,1:63:99:371,0,344	0/0:26,0:26:7.11:0,7,127	0/1:26,1:25:2.74:29,0,3	0/1:28,1:25:9.95:155,0,10	0/1:33,2:30:0.58:1,0,1	0/1:59,1:49:56.89:57,0,247	0/1:33,0:29:16.58:17,0,224	0/1:23,0:23:59.26:153,0,59	0/1:23,0:23:50.47:50,0,184	0/1:38,0:18:16.57:127,0,17	0/1:46,1:40:52.74:56,0,53	0/1:82,0:69:61.67:62,0,133	0/0:31,1:25:2.79:0,3,26	./.	0/1:15,0:12:0:0,0,0	0/1:31,0:29:29.51:67,0,30	0/1:32,0:26:70.20:259,0,70	0/1:11,0:8:57.30:71,0,57	0/0:8,0:7:9.28:0,9,73
chr10	7611100	.	TCACACA	T	1046.54	PASS	AB=0.910;AC=20;AF=0.357;AN=56;BaseQRankSum=-0.233;DP=960;FS=12.450;HRun=0;HaplotypeScore=348.3684;InbreedingCoeff=-0.0835;MQ=40.90;MQ0=35;MQRankSum=-4.996;QD=1.78;ReadPosRankSum=-10.563;VQSLOD=-0.6222;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:50,0:51:83.41:83,0,895	0/1:14,0:13:7.64:8,0,229	1/1:16,0:2:0.47:1,0,0	0/0:31,0:4:8.80:0,9,99	0/0:38,0:37:29.74:0,30,797	0/1:21,0:21:0.08:0,0,603	0/1:36,0:33:41.26:41,0,315	0/1:46,0:22:99:107,0,232	0/1:61,0:58:37.69:38,0,910	0/1:58,0:50:50.07:50,0,1218	0/0:18,0:18:27:0,27,446	1/1:13,9:20:7.69:47,8,0	0/1:19,8:25:11.89:512,0,12	0/1:12,16:25:0.58:2,0,1	0/0:64,0:57:69.93:0,70,1568	0/0:38,0:36:57.05:0,57,1142	0/0:38,0:39:48.16:0,48,1230	0/1:24,0:28:36.21:36,0,507	0/1:24,0:14:55.16:55,0,389	0/0:38,0:33:0:0,0,610	0/1:103,0:94:99:101,0,1911	0/1:17,7:19:34.26:45,0,34	0/1:7,8:13:0.31:0,0,0	1/1:9,4:12:5.84:69,6,0	0/0:30,0:30:35.26:0,35,588	0/0:44,0:42:40.54:0,41,1165	0/0:15,0:16:18.91:0,19,407	0/0:11,0:12:3.97:0,4,224
chr10	7611106	.	A	ACT	20983.15	PASS	AB=0.721;AC=47;AF=0.839;AN=56;BaseQRankSum=-9.013;DP=980;FS=8.694;HRun=0;HaplotypeScore=247.4587;InbreedingCoeff=0.1023;MQ=42.37;MQ0=35;MQRankSum=5.748;QD=22.30;ReadPosRankSum=4.351;VQSLOD=3.4726;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:24,31:55:93.98:1685,94,0	1/1:4,7:13:24.08:436,24,0	1/1:23,0:2:0.47:1,0,0	0/0:39,0:5:11.79:0,12,119	0/1:6,30:37:6.79:652,0,7	1/1:9,14:23:36.84:692,37,0	1/1:16,23:37:11.35:358,11,0	1/1:32,12:24:47.25:941,47,0	1/1:23,34:57:79.95:1409,80,0	0/1:12,41:51:14.51:1520,0,15	1/1:5,14:19:1.01:436,1,0	1/1:23,0:22:7.40:61,7,0	0/1:28,0:27:14.14:354,0,14	0/1:28,0:25:0.26:0,0,0	1/1:12,49:57:44.10:1535,44,0	1/1:6,28:34:35.93:1071,36,0	1/1:15,25:40:62.20:1579,62,0	0/1:15,12:27:11.39:649,0,11	1/1:20,6:16:39.05:578,39,0	0/1:13,18:28:35.82:490,0,36	1/1:58,51:99:99:2838,156,0	1/1:21,0:20:11.96:125,12,0	1/1:15,0:14:2.74:25,3,0	1/1:13,0:12:8.71:94,9,0	1/1:8,22:32:10.78:607,11,0	1/1:14,29:43:93.17:1903,93,0	1/1:6,16:22:2.01:575,2,0	0/1:6,10:15:13.91:368,0,14
chr10	7611144	.	AC	A	4752.25	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=11.071;DP=1202;FS=20.539;HRun=1;HaplotypeScore=345.7533;InbreedingCoeff=0.9998;MQ=58.73;MQ0=15;MQRankSum=-8.881;QD=20.94;ReadPosRankSum=-9.245;VQSLOD=0.5016;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:68,0:66:99:0,138,2125	0/0:19,0:19:48.11:0,48,731	0/0:69,0:37:84.06:0,84,1065	0/0:93,1:42:87.02:0,87,1284	0/0:28,0:26:40.54:0,41,620	0/0:25,0:24:50.88:0,51,664	0/0:27,0:27:54.18:0,54,836	0/0:39,0:36:99:0,99,1505	0/0:46,0:46:80.25:0,80,1301	0/0:46,0:46:99:0,126,1947	0/0:24,0:24:36.64:0,37,549	1/1:1,46:46:99:1175,106,0	1/1:2,35:35:77.64:978,78,0	1/1:1,38:35:63.88:587,64,0	0/0:52,0:52:79.23:0,79,1236	0/0:32,0:32:69.16:0,69,1043	0/0:46,0:45:99:0,123,1934	0/0:34,0:33:90.27:0,90,1390	0/0:27,0:16:32.86:0,33,503	0/0:31,0:30:48.98:0,49,732	0/0:129,0:123:99:0,307,4576	1/1:0,32:31:62.11:524,62,0	1/1:2,23:22:32.62:382,33,0	1/1:3,44:44:99:1107,101,0	0/0:34,0:34:46.16:0,46,715	0/0:50,0:49:99:0,138,2159	0/0:35,0:35:81.16:0,81,1200	0/0:19,0:19:44.76:0,45,621
chr10	7612406	.	T	TA	6219.71	PASS	AB=0.923;AC=15;AF=0.268;AN=56;BaseQRankSum=-6.249;DP=709;FS=3.260;HRun=6;HaplotypeScore=89.1574;InbreedingCoeff=0.9248;MQ=88.10;MQ0=1;MQRankSum=-2.381;QD=28.93;ReadPosRankSum=0.566;VQSLOD=5.2718;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:43:99:0,117,1192	0/0:13,0:13:30.06:0,30,306	0/0:31,0:31:78.09:0,78,761	0/0:22,0:22:54.03:0,54,522	1/1:2,33:35:99:1243,99,0	0/0:19,0:19:51.08:0,51,510	0/0:16,0:16:42.09:0,42,429	1/1:3,27:29:83.07:1013,83,0	0/0:21,0:21:57.13:0,57,581	1/1:1,26:27:78.25:981,78,0	1/1:3,22:25:63.20:793,63,0	0/0:26,0:26:72.14:0,72,727	0/0:22,0:22:57.13:0,57,581	0/0:29,0:29:69.15:0,69,704	1/1:0,32:32:75.24:943,75,0	1/1:5,17:23:42.13:525,42,0	0/0:30,0:30:87.12:0,87,862	1/1:2,17:19:57.18:715,57,0	0/0:24,0:24:66.15:0,66,673	0/0:34,0:34:99:0,99,985	0/0:30,0:30:87.16:0,87,877	0/0:25,0:25:72.13:0,72,720	0/0:25,0:25:66.11:0,66,660	0/0:25,0:25:69.13:0,69,695	0/0:26,0:26:72.14:0,72,726	0/1:22,2:24:6.33:6,0,574	0/0:25,0:25:69.15:0,69,703	0/0:7,0:7:21.05:0,21,214
chr10	7613892	.	TAC	T	9447.07	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=16.502;DP=839;FS=3.881;HRun=0;HaplotypeScore=116.3412;InbreedingCoeff=0.9907;MQ=61.96;MQ0=13;MQRankSum=5.084;QD=26.46;ReadPosRankSum=3.629;VQSLOD=6.1997;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,99,1633	0/0:12,0:12:18.06:0,18,306	0/0:47,0:19:27.97:0,28,333	0/0:40,0:20:27.58:0,28,318	1/1:3,24:27:63.20:819,63,0	0/0:24,0:24:69.22:0,69,1125	0/0:34,0:34:87.25:0,87,1394	1/1:9,25:34:75.20:931,75,0	0/0:40,0:40:99:0,117,1873	1/1:8,24:31:69.16:849,69,0	1/1:4,13:16:27.56:352,28,0	1/1:6,26:32:57.18:741,57,0	1/1:3,26:29:69.22:897,69,0	1/1:2,24:26:51.05:663,51,0	1/1:4,27:31:60.19:780,60,0	1/1:5,25:28:9.18:690,9,0	0/0:33,0:33:96.28:0,96,1564	1/1:1,16:17:30.10:388,30,0	0/0:15,0:15:42.14:0,42,690	0/0:35,0:35:78.22:0,78,1241	0/0:58,0:58:99:0,156,2590	1/1:0,26:26:63.20:819,63,0	1/1:2,25:27:60.19:780,60,0	1/1:3,26:28:57.18:741,57,0	0/0:28,0:28:48.14:0,48,748	0/0:30,0:30:81.28:0,81,1378	0/0:35,0:35:81.15:0,81,1302	0/0:13,0:13:39.03:0,39,525
chr10	7614233	.	C	CGTTCCCGTTCCT	17853.60	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-7.177;DP=554;FS=7.919;HRun=0;HaplotypeScore=158.9174;InbreedingCoeff=0.9989;MQ=91.02;MQ0=0;MQRankSum=-13.601;QD=93.47;ReadPosRankSum=-0.094;VQSLOD=4.4692;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,9:37:45.15:2503,45,0	1/1:0,9:11:27.09:1663,27,0	0/0:23,0:23:66.14:0,66,1864	0/0:27,0:27:61.15:0,61,1823	0/0:22,0:22:65.98:0,66,2070	1/1:7,5:16:30.10:1430,30,0	1/1:7,7:23:39.13:2135,39,0	0/0:26,0:26:72.09:0,72,2159	1/1:2,5:13:21.07:1294,21,0	0/0:20,0:20:57.17:0,57,1854	0/0:15,0:15:45.05:0,45,1520	0/0:20,0:20:60.06:0,60,2070	0/0:13,0:13:36.10:0,36,1136	0/0:15,0:15:45.07:0,45,1436	0/0:16,0:16:42.14:0,42,1456	0/0:13,0:13:36.12:0,36,1310	1/1:5,10:31:36.12:1997,36,0	0/0:23,0:23:66.08:0,66,2136	1/1:5,4:20:57.15:2181,57,0	1/1:8,8:20:54.08:2613,54,0	0/0:26,0:26:78.25:0,78,2662	0/0:10,0:10:30.06:0,30,1045	0/0:14,0:14:39.13:0,39,1475	0/0:31,0:31:90.28:0,90,3179	1/1:2,9:19:33.11:2036,33,0	0/0:20,0:20:56.36:0,56,1842	0/0:17,0:17:51.11:0,51,1790	0/0:12,0:12:33.10:0,33,1163
chr10	7614971	.	CATGTGTGTGTGTGTGTGT	C	829.87	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=6.161;DP=641;FS=0.000;HRun=0;HaplotypeScore=268.1114;InbreedingCoeff=0.6960;MQ=65.75;MQ0=11;MQRankSum=3.120;QD=21.84;ReadPosRankSum=-0.998;VQSLOD=2.2087;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,105,1541	0/0:11,0:12:33.07:0,33,1000	0/0:25,0:17:23.66:0,24,345	0/0:33,0:20:44.54:0,45,515	0/0:11,0:12:30.02:0,30,830	0/0:11,0:11:17.49:0,17,604	0/0:35,0:34:75.83:0,76,1798	0/0:30,0:29:85.86:0,86,1386	0/0:22,0:22:34.74:0,35,749	0/0:15,0:15:45.11:0,45,1191	0/0:13,0:14:33.52:0,34,990	0/0:34,0:34:49.93:0,50,1103	0/0:22,0:22:60.99:0,61,1510	0/0:19,0:19:35.88:0,36,752	0/0:26,0:26:66.39:0,66,1455	0/0:26,0:27:62.76:0,63,1315	0/0:29,0:29:56.28:0,56,850	0/0:21,0:21:53.91:0,54,1175	0/0:16,0:14:39.46:0,39,500	0/0:13,0:13:27.03:0,27,718	0/0:3,51:50:0:0,0,0	0/0:19,0:19:35.47:0,35,529	0/0:12,0:12:14.80:0,15,328	0/0:43,0:43:54.76:0,55,751	0/0:17,0:17:38.12:0,38,907	1/1:0,20:20:45.04:594,45,0	1/1:0,14:14:6.33:316,6,0	0/1:4,0:4:40.94:41,0,103
chr10	7614972	.	ATGTGTGTG	A	1125.33	PASS	AB=0.785;AC=25;AF=0.481;AN=52;BaseQRankSum=2.630;DP=644;FS=1.017;HRun=0;HaplotypeScore=177.4429;InbreedingCoeff=0.1057;MQ=65.56;MQ0=11;MQRankSum=-3.639;QD=3.04;ReadPosRankSum=0.639;VQSLOD=2.6989;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:41,1:43:2.89:62,3,0	1/1:10,1:12:8.92:148,9,0	./.	./.	0/0:12,0:12:9.02:0,9,142	0/1:5,1:11:0.50:29,0,1	0/1:29,0:34:35.20:60,0,35	0/0:30,0:29:4.56:0,5,42	0/1:13,1:23:17.50:71,0,18	0/1:16,0:16:42.30:63,0,42	0/0:13,1:14:9.01:0,9,92	1/1:20,14:34:4.98:145,5,0	1/1:20,1:22:8.45:185,8,0	0/1:12,7:19:14.77:76,0,15	0/1:20,4:26:32.85:72,0,33	1/1:21,1:27:8.71:101,9,0	0/0:22,0:30:2.66:0,3,23	0/1:14,0:20:29.59:30,0,123	0/0:17,0:15:0.89:0,1,2	0/0:8,0:12:2.50:0,2,9	0/0:54,0:50:0:0,0,0	1/1:13,5:19:0.94:2,1,0	0/1:7,5:12:0.02:0,0,0	0/0:34,9:43:3.01:0,3,77	0/1:14,1:17:3.34:6,0,3	1/1:20,0:20:5.23:107,5,0	1/1:14,0:13:5.85:111,6,0	0/0:4,0:4:2.96:0,3,19
chr10	7615507	.	A	AC	16993.84	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-3.060;DP=660;FS=6.837;HRun=1;HaplotypeScore=83.9740;InbreedingCoeff=0.9956;MQ=92.20;MQ0=0;MQRankSum=-11.498;QD=28.09;ReadPosRankSum=7.553;VQSLOD=3.9979;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,38:39:99:1708,114,0	1/1:1,13:14:39.13:584,39,0	0/0:28,0:28:73.30:0,73,964	0/0:27,0:27:74.44:0,74,982	1/1:30,0:30:68.87:550,69,0	1/1:0,21:21:63.21:944,63,0	1/1:2,18:20:54.18:809,54,0	1/1:28,0:28:81.46:458,81,0	1/1:0,10:10:21.07:315,21,0	1/1:36,0:36:78.90:551,79,0	1/1:32,0:32:65.68:510,66,0	1/1:28,0:28:79.36:484,79,0	1/1:25,0:25:62.01:401,62,0	1/1:28,0:28:51.75:429,52,0	1/1:18,0:18:22.37:250,22,0	1/1:19,0:19:47.05:289,47,0	1/1:1,30:31:87.29:1304,87,0	1/1:17,2:19:56.17:407,56,0	1/1:0,12:12:36.10:519,36,0	1/1:1,34:35:99:1458,99,0	1/1:0,9:9:27.09:405,27,0	1/1:28,0:28:74.69:473,75,0	1/1:22,0:22:62.03:398,62,0	1/1:14,0:14:41.41:270,41,0	1/1:1,19:20:45.15:674,45,0	1/1:0,29:29:84.26:1234,84,0	1/1:1,24:24:69.23:1033,69,0	1/1:0,13:13:36.12:539,36,0
chr10	7615508	.	C	CT	18414.55	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-3.852;DP=665;FS=4.044;HRun=1;HaplotypeScore=79.6339;InbreedingCoeff=0.9897;MQ=91.49;MQ0=0;MQRankSum=-10.550;QD=30.14;ReadPosRankSum=7.540;VQSLOD=4.1866;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:40,0:40:92.86:741,93,0	1/1:14,0:14:16.73:235,17,0	0/0:27,0:27:69.98:0,70,926	0/0:27,0:27:63.24:0,63,889	1/1:1,30:31:87.29:1304,87,0	1/1:23,0:23:62.16:411,62,0	1/1:21,0:21:32.41:328,32,0	1/1:1,28:29:84.28:1258,84,0	1/1:11,0:11:20.71:135,21,0	1/1:1,35:36:99:1574,105,0	1/1:2,31:33:84.28:1259,84,0	1/1:0,28:28:81.27:1214,81,0	1/1:0,24:24:63.21:944,63,0	1/1:1,27:28:75.25:1124,75,0	1/1:1,16:17:45.15:675,45,0	1/1:0,19:19:48.16:720,48,0	1/1:31,0:31:64.97:537,65,0	1/1:2,17:19:57.07:801,57,0	1/1:12,0:12:31.79:197,32,0	1/1:35,0:35:73.87:604,74,0	1/1:9,0:9:26.62:173,27,0	1/1:2,28:30:78.22:1144,78,0	1/1:1,22:23:63.21:944,63,0	1/1:0,14:14:42.14:630,42,0	1/1:20,0:20:22.54:263,23,0	1/1:28,0:28:79.31:483,79,0	1/1:23,0:22:68.31:476,68,0	1/1:13,0:13:35.58:241,36,0
chr10	7617573	.	GGT	G	23288.17	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-2.687;DP=624;FS=1.669;HRun=0;HaplotypeScore=100.1750;InbreedingCoeff=0.9917;MQ=92.30;MQ0=0;MQRankSum=-11.412;QD=41.66;ReadPosRankSum=8.108;VQSLOD=6.0889;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,12:13:36.12:551,36,0	1/1:0,5:5:15.05:230,15,0	0/0:29,0:30:79.77:0,80,1356	0/0:35,0:35:96.28:0,96,1716	1/1:0,27:27:72.24:1094,72,0	1/1:0,26:26:72.20:1077,72,0	1/1:0,15:15:42.14:643,42,0	1/1:0,34:34:99:1552,102,0	1/1:0,20:20:51.17:779,51,0	1/1:1,22:23:69.23:1053,69,0	1/1:2,28:30:84.29:1287,84,0	1/1:0,22:22:63.21:965,63,0	1/1:1,26:27:75.25:1149,75,0	1/1:0,28:28:75.25:1147,75,0	1/1:1,19:20:51.17:781,51,0	1/1:1,23:24:60.20:919,60,0	1/1:1,27:28:71.60:1101,72,0	1/1:0,13:13:36.12:551,36,0	1/1:1,19:20:57.17:831,57,0	1/1:0,24:24:69.23:1057,69,0	1/1:0,20:20:57.19:873,57,0	1/1:1,18:19:42.14:643,42,0	1/1:1,19:20:45.15:689,45,0	1/1:1,16:17:48.16:735,48,0	1/1:0,23:23:60.20:919,60,0	1/1:0,18:18:51.17:781,51,0	1/1:0,31:31:87.30:1331,87,0	1/1:0,12:12:36.12:551,36,0
chr10	7618188	.	TTA	T	19077.59	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=17.063;DP=694;FS=0.639;HRun=0;HaplotypeScore=136.5200;InbreedingCoeff=0.9992;MQ=86.40;MQ0=0;MQRankSum=-5.383;QD=39.83;ReadPosRankSum=4.068;VQSLOD=6.5650;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,47:47:99:2021,132,0	1/1:0,11:11:27.05:387,27,0	0/0:26,0:26:62.40:0,62,1185	0/0:22,0:22:54.18:0,54,999	0/0:25,0:25:75.26:0,75,1443	1/1:1,31:32:84.20:1233,84,0	1/1:1,25:26:60.20:918,60,0	0/0:37,0:37:99:0,108,2011	1/1:2,18:20:54.18:827,54,0	0/0:27,0:27:78.26:0,78,1438	0/0:18,0:18:47.87:0,48,892	1/1:0,23:23:60.20:918,60,0	1/1:0,27:27:65.88:1010,66,0	1/1:2,20:22:63.17:938,63,0	0/0:27,0:27:81.26:0,81,1531	0/0:18,0:18:54.19:0,54,1042	1/1:0,42:42:99:1791,117,0	0/0:15,0:15:45.11:0,45,829	1/1:1,22:23:66.16:963,66,0	1/1:2,20:22:57.11:820,57,0	1/1:2,35:37:95.92:1469,96,0	1/1:0,21:21:57.02:768,57,0	1/1:0,22:22:63.17:938,63,0	1/1:0,28:28:74.45:1147,74,0	1/1:0,25:25:57.15:846,57,0	1/1:0,19:19:54.16:798,54,0	1/1:0,25:25:63.21:964,63,0	1/1:0,7:7:21.07:321,21,0
chr10	7618509	.	T	TA	3060.61	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=-9.564;DP=610;FS=1.330;HRun=8;HaplotypeScore=87.8358;InbreedingCoeff=0.9295;MQ=78.15;MQ0=0;MQRankSum=0.282;QD=22.34;ReadPosRankSum=-1.123;VQSLOD=3.3767;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:92.67:0,93,826	0/0:11,0:11:30:0,30,270	0/0:16,0:16:36.01:0,36,327	0/1:10,0:11:0.99:1,0,151	1/1:6,11:17:32.89:331,33,0	0/0:24,0:24:65.99:0,66,597	0/0:27,0:27:72.01:0,72,654	1/1:2,21:23:54.15:613,54,0	0/0:27,1:28:40.40:0,40,616	1/1:2,11:13:30.09:346,30,0	1/1:1,5:6:8.96:87,9,0	0/0:23,0:23:60:0,60,544	0/0:23,0:23:60:0,60,545	0/0:24,0:24:66:0,66,597	1/1:3,20:23:29.70:596,30,0	1/1:2,25:27:75.22:866,75,0	0/0:31,0:31:87.04:0,87,796	1/1:4,13:17:36.11:416,36,0	0/0:21,0:21:54.02:0,54,494	0/0:24,0:24:63.03:0,63,576	0/0:29,0:29:77.99:0,78,699	0/0:18,0:18:48:0,48,434	0/0:15,0:15:42:0,42,378	0/0:25,0:25:72.02:0,72,654	0/0:17,1:18:10.40:0,10,350	0/0:28,1:29:45.77:0,46,653	0/0:38,0:38:96.04:0,96,879	0/0:14,0:14:30.01:0,30,274
chr10	7618812	.	G	GGT	6748.59	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=15.504;DP=773;FS=1.514;HRun=0;HaplotypeScore=115.2417;InbreedingCoeff=0.9493;MQ=90.76;MQ0=0;MQRankSum=-3.081;QD=34.79;ReadPosRankSum=2.186;VQSLOD=6.9693;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:60,0:60:99:0,162,2045	0/0:11,0:11:33.09:0,33,407	0/0:35,0:34:54.50:0,55,763	0/0:35,0:35:68.58:0,69,760	1/1:4,21:27:45.15:745,45,0	0/0:23,0:23:66.21:0,66,840	0/0:31,0:31:75.24:0,75,955	1/1:18,18:35:75.23:1194,75,0	0/0:25,0:25:69.22:0,69,878	1/1:13,23:36:2.82:1097,3,0	1/1:3,11:14:18.06:300,18,0	0/0:26,0:26:69.22:0,69,878	0/0:31,0:31:90.27:0,90,1130	0/0:29,0:29:81.25:0,81,1017	1/1:2,25:28:72.25:1195,72,0	1/1:5,24:29:40.07:1214,40,0	0/0:38,0:38:99:0,111,1413	1/1:2,22:24:60.68:1004,61,0	0/0:17,0:17:39.11:0,39,483	0/0:29,0:29:69.22:0,69,878	0/0:41,0:41:99:0,108,1375	0/0:17,0:17:36.11:0,36,446	0/0:16,0:16:39.12:0,39,496	0/0:28,0:28:84.27:0,84,1070	0/0:17,0:17:45.14:0,45,573	0/0:38,2:40:7.96:0,8,1174	0/0:25,0:25:69.22:0,69,877	0/0:5,0:5:15.05:0,15,191
chr10	7619044	.	CT	C	3792.87	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=6.596;DP=668;FS=1.630;HRun=8;HaplotypeScore=114.6288;InbreedingCoeff=0.9702;MQ=77.73;MQ0=9;MQRankSum=-3.838;QD=25.63;ReadPosRankSum=-2.030;VQSLOD=2.2166;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:66.16:0,66,758	0/0:12,0:12:36.10:0,36,420	0/0:58,1:29:14.05:0,14,445	0/0:68,2:38:4.31:0,4,375	1/1:0,26:26:75.12:721,75,0	0/0:21,0:21:60.18:0,60,723	0/0:19,0:19:48.15:0,48,579	1/1:3,35:38:99:946,99,0	0/0:17,0:17:42.12:0,42,496	1/1:2,24:26:72.12:697,72,0	1/1:2,13:15:27.47:362,27,0	0/0:15,0:15:35.50:0,35,255	0/0:17,0:17:35.71:0,36,257	0/0:19,0:19:44.62:0,45,315	1/1:2,9:11:23.63:213,24,0	1/1:0,18:18:51.08:492,51,0	0/0:24,0:24:51.12:0,51,589	1/1:4,10:14:38.96:362,39,0	0/0:27,0:26:69.18:0,69,800	0/0:26,0:26:63.16:0,63,727	0/0:19,0:19:48.13:0,48,568	0/0:21,0:21:59.52:0,60,421	0/0:27,0:27:65.45:0,65,472	0/0:13,0:13:35.76:0,36,277	0/0:22,0:22:63.17:0,63,741	0/0:31,0:31:81.25:0,81,978	0/0:24,0:24:52.99:0,53,703	0/0:9,0:9:26.93:0,27,293
chr10	7619067	.	A	AT	2498.60	PASS	AB=0.987;AC=15;AF=0.268;AN=56;BaseQRankSum=10.469;DP=618;FS=1.951;HRun=7;HaplotypeScore=124.8487;InbreedingCoeff=0.9378;MQ=72.12;MQ0=9;MQRankSum=-8.585;QD=11.90;ReadPosRankSum=-3.714;VQSLOD=1.6472;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:62.79:0,63,567	0/0:13,0:13:36.05:0,36,345	0/0:63,0:27:11.47:0,11,283	0/1:75,0:33:0.59:1,0,150	1/1:21,6:26:44.96:437,45,0	0/0:21,0:21:57.09:0,57,549	0/0:13,0:13:24.03:0,24,231	1/1:19,11:31:60.75:653,61,0	0/0:15,0:15:42.06:0,42,402	1/1:18,6:24:42.12:479,42,0	1/1:14,3:17:26.38:381,26,0	0/0:19,0:19:45.05:0,45,423	0/0:16,0:16:35.84:0,36,313	0/0:18,0:18:39.04:0,39,365	1/1:8,2:10:21.06:183,21,0	1/1:10,3:14:21.20:279,21,0	0/0:30,0:30:69.07:0,69,657	1/1:8,3:11:30.29:282,30,0	0/0:20,0:20:44.09:0,44,407	0/0:22,0:21:54.03:0,54,505	0/0:12,0:12:27.02:0,27,249	0/0:8,0:8:24.04:0,24,228	0/0:22,0:22:53.90:0,54,500	0/0:12,0:12:34.94:0,35,299	0/0:22,0:22:60.05:0,60,570	0/0:26,0:26:66.10:0,66,631	0/0:24,0:24:59.82:0,60,536	0/0:7,0:7:13.57:0,14,118
chr10	7619071	.	TTTTC	T	3071.70	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=12.065;DP=610;FS=1.789;HRun=0;HaplotypeScore=146.3795;InbreedingCoeff=0.8515;MQ=69.06;MQ0=13;MQRankSum=-10.478;QD=16.25;ReadPosRankSum=-5.161;VQSLOD=2.5239;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:63.09:0,63,678	0/0:13,0:13:39.05:0,39,758	0/1:58,0:23:35.04:35,0,379	0/0:75,0:30:17.91:0,18,225	1/1:17,10:26:55.88:595,56,0	0/0:23,0:23:52.20:0,52,1258	0/0:9,0:9:27.09:0,27,565	1/1:28,2:30:68.61:669,69,0	0/0:15,0:15:45.15:0,45,905	1/1:14,7:21:39.81:424,40,0	1/1:10,6:16:46.02:468,46,0	0/0:19,0:19:45.10:0,45,477	0/0:16,0:16:36.03:0,36,373	0/0:20,0:20:40.12:0,40,433	1/1:6,3:9:24.06:319,24,0	1/1:11,3:14:0.02:320,0,0	0/0:32,0:32:84.07:0,84,1667	1/1:9,5:14:28.87:434,29,0	0/0:18,0:18:25.11:0,25,870	0/0:20,0:19:54.11:0,54,1043	0/0:10,0:10:27.03:0,27,285	0/0:10,0:10:23.73:0,24,239	0/0:23,0:23:54.82:0,55,605	0/0:13,0:13:35.62:0,36,353	0/0:22,0:22:63.14:0,63,1276	0/0:27,0:26:69.12:0,69,740	0/0:25,0:25:60.10:0,60,641	0/0:6,0:6:11.16:0,11,130
chr10	7619074	.	TC	T	1803.89	PASS	AB=0.966;AC=27;AF=0.482;AN=56;BaseQRankSum=13.021;DP=587;FS=16.660;HRun=1;HaplotypeScore=117.2606;InbreedingCoeff=0.3090;MQ=67.81;MQ0=14;MQRankSum=-2.967;QD=4.84;ReadPosRankSum=1.857;VQSLOD=-0.7567;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:23,1:24:42.71:99,0,43	0/0:13,0:13:35.23:0,35,364	0/0:56,0:22:20.50:0,21,238	0/1:69,3:29:6.66:7,0,94	1/1:23,0:22:49.77:263,50,0	0/0:23,0:23:42.47:0,42,597	0/0:10,0:10:26.97:0,27,285	1/1:26,0:26:57.59:331,58,0	0/0:15,0:15:37.20:0,37,414	1/1:17,0:17:36.24:192,36,0	1/1:16,1:17:46.27:247,46,0	0/1:19,0:19:8.27:26,0,8	0/1:14,1:15:2.43:70,0,2	0/1:21,0:21:24.01:55,0,24	1/1:7,1:8:16.86:122,17,0	1/1:11,0:11:25.84:158,26,0	0/0:30,0:30:80.03:0,80,828	1/1:14,1:15:28.85:179,29,0	0/1:17,1:17:12.11:12,0,437	0/0:20,0:19:43.79:0,44,507	0/1:10,0:10:13.68:15,0,14	0/1:10,0:10:2.09:2,0,4	0/1:21,1:22:23:23,0,148	0/1:11,2:13:1.21:95,0,1	0/0:22,0:22:44.83:0,45,595	0/0:24,1:24:6.05:0,6,59	0/1:25,0:25:15:83,0,15	1/1:6,0:6:5.61:15,6,0
chr10	7619075	.	CT	C	3638.70	PASS	AB=0.978;AC=33;AF=0.589;AN=56;BaseQRankSum=5.674;DP=604;FS=2.324;HRun=10;HaplotypeScore=123.3250;InbreedingCoeff=0.2990;MQ=66.19;MQ0=14;MQRankSum=-0.028;QD=7.71;ReadPosRankSum=3.693;VQSLOD=1.9488;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,20:25:4.32:412,4,0	0/0:12,1:13:10.05:0,10,338	0/1:52,2:21:18.63:19,0,85	0/1:71,3:30:52.26:52,0,58	0/1:25,0:24:14.30:14,0,45	0/0:23,1:24:7.60:0,8,521	0/0:10,0:10:4.05:0,4,271	0/1:26,2:28:38.71:39,0,45	0/0:15,0:15:16.06:0,16,398	0/1:20,0:20:5.02:8,0,5	0/1:19,1:20:19.94:23,0,20	1/1:1,18:19:41.99:365,42,0	1/1:2,13:15:32.99:285,33,0	1/1:3,18:21:38.44:337,38,0	1/1:8,0:8:3.84:18,4,0	0/1:12,0:12:5.06:5,0,32	0/0:29,0:29:78.17:0,78,838	0/1:12,0:16:7.46:7,0,41	0/0:20,0:19:19.54:0,20,349	0/1:20,0:19:6.78:7,0,379	1/1:2,8:10:26.98:231,27,0	1/1:1,9:10:20.99:182,21,0	1/1:9,14:23:2.71:252,3,0	1/1:3,10:13:32.99:284,33,0	0/0:21,0:21:56.74:0,57,607	1/1:4,21:24:62.98:547,63,0	1/1:4,22:26:53.35:451,53,0	1/1:1,5:6:9.92:101,10,0
chr10	7619097	.	TC	T	1829.93	PASS	AB=0.977;AC=16;AF=0.286;AN=56;BaseQRankSum=9.124;DP=562;FS=7.119;HRun=1;HaplotypeScore=103.4470;InbreedingCoeff=0.8337;MQ=59.41;MQ0=11;MQRankSum=-11.896;QD=8.32;ReadPosRankSum=-3.110;VQSLOD=-0.2982;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:65.68:0,66,632	0/0:12,0:12:34.29:0,34,342	0/1:42,0:12:6.79:7,0,92	0/1:40,2:15:13.17:13,0,50	1/1:26,3:27:68.97:465,69,0	0/0:22,0:22:59.67:0,60,554	0/0:11,0:11:32.65:0,33,321	1/1:23,0:23:46.59:288,47,0	0/0:11,0:11:29.75:0,30,278	1/1:22,0:22:50.09:343,50,0	1/1:24,1:25:56.95:353,57,0	0/0:18,0:18:47.99:0,48,473	0/0:16,0:16:36.69:0,37,310	0/0:18,0:18:15.60:0,16,260	1/1:10,1:11:26.68:181,27,0	1/1:10,1:11:25.21:163,25,0	0/0:35,0:34:86.72:0,87,840	1/1:14,1:15:32.95:217,33,0	0/0:22,0:21:26.28:0,26,381	0/0:21,0:20:50.75:0,51,523	0/0:11,0:11:14.59:0,15,255	0/0:10,0:10:20.58:0,21,225	0/0:16,0:16:34.74:0,35,351	0/0:11,0:11:29.81:0,30,326	0/0:27,0:27:58.94:0,59,626	0/0:28,0:27:45.84:0,46,604	0/0:25,0:25:40.01:0,40,431	0/0:6,0:6:15.01:0,15,149
chr10	7619591	.	TA	T	4832.61	PASS	AB=0.917;AC=48;AF=0.857;AN=56;BaseQRankSum=5.934;DP=510;FS=2.616;HRun=13;HaplotypeScore=77.0223;InbreedingCoeff=0.5045;MQ=74.85;MQ0=0;MQRankSum=-0.222;QD=10.35;ReadPosRankSum=0.881;VQSLOD=4.5721;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,0:22:28.50:82,28,0	1/1:0,5:5:11.93:88,12,0	0/1:18,0:14:11.19:11,0,80	0/1:7,0:6:3.63:4,0,12	1/1:2,1:28:40.52:132,41,0	1/1:8,27:37:78.61:559,79,0	1/1:1,22:24:61.69:443,62,0	1/1:8,0:34:50.45:149,50,0	1/1:3,13:16:26.79:197,27,0	1/1:3,0:22:42.10:131,42,0	1/1:2,0:18:27.02:81,27,0	1/1:2,9:11:26.83:197,27,0	1/1:2,11:15:31.84:224,32,0	1/1:2,12:14:32.76:240,33,0	1/1:0,0:14:20.37:59,20,0	1/1:2,0:22:35.51:103,36,0	1/1:1,24:25:56.66:416,57,0	1/1:1,0:11:14.26:41,14,0	1/1:7,18:26:55.68:397,56,0	1/1:5,18:24:30.58:307,31,0	0/1:3,1:4:9.89:10,0,76	1/1:2,9:11:23.77:170,24,0	1/1:1,19:20:41.47:306,41,0	1/1:0,8:8:23.86:175,24,0	1/1:3,15:18:18.55:299,19,0	0/0:15,0:16:41.88:0,42,381	0/0:25,0:27:33.54:0,34,454	0/1:11,2:13:13.75:14,0,204
chr10	7619832	.	GT	G	7237.68	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=12.411;DP=721;FS=0.963;HRun=3;HaplotypeScore=71.5471;InbreedingCoeff=0.9940;MQ=90.00;MQ0=0;MQRankSum=-5.124;QD=35.31;ReadPosRankSum=-0.353;VQSLOD=5.1658;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:87.29:0,87,1253	0/0:9,0:9:24.08:0,24,346	0/0:31,0:31:84.28:0,84,1184	0/0:29,0:29:46.24:0,46,1062	1/1:0,39:39:99:1413,114,0	0/0:39,0:39:99:0,108,1522	0/0:13,0:13:39.13:0,39,562	1/1:1,40:41:99:1450,120,0	0/0:33,0:33:93.29:0,93,1305	1/1:0,28:28:81.24:991,81,0	1/1:0,22:22:60.19:744,60,0	0/0:27,0:27:81.25:0,81,1146	0/0:25,0:25:75.25:0,75,1080	0/0:26,0:26:75.24:0,75,1063	1/1:0,32:32:96.30:1190,96,0	1/1:1,28:29:75.24:930,75,0	0/0:15,0:15:45.15:0,45,648	1/1:0,14:14:42.13:521,42,0	0/0:17,0:17:48.16:0,48,691	0/0:32,0:32:84.28:0,84,1209	0/0:26,0:26:66.20:0,66,929	0/0:29,0:29:87.28:0,87,1235	0/0:17,0:17:48.16:0,48,686	0/0:27,0:27:81.27:0,81,1166	0/0:22,0:22:66.21:0,66,933	0/0:23,1:24:35.04:0,35,957	0/0:40,0:40:99:0,120,1728	0/0:6,0:6:12.04:0,12,171
chr10	7620507	.	TACACAC	T	810.63	PASS	AB=0.933;AC=11;AF=0.220;AN=50;BaseQRankSum=4.460;DP=507;FS=3.620;HRun=0;HaplotypeScore=115.1434;InbreedingCoeff=0.6318;MQ=68.29;MQ0=8;MQRankSum=-4.164;QD=8.11;ReadPosRankSum=-0.910;VQSLOD=2.1398;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:22:6.02:0,6,145	0/0:7,0:7:9.03:0,9,229	./.	./.	0/0:10,0:17:11.20:0,11,331	0/0:24,0:24:21.07:0,21,540	0/0:20,0:24:24.08:0,24,705	0/0:28,0:28:30.08:0,30,767	0/0:9,0:11:18.04:0,18,393	0/0:17,0:17:22.63:0,23,623	0/0:12,0:12:2.21:0,2,70	1/1:11,7:19:15.05:305,15,0	1/1:4,8:14:18.06:328,18,0	1/1:14,4:19:12.04:225,12,0	0/0:16,0:20:10.92:0,11,274	0/0:7,0:11:15.04:0,15,298	0/0:19,0:27:31.04:0,31,761	0/0:20,0:20:21.12:0,21,358	0/0:11,0:11:3.89:0,4,28	0/0:14,0:16:21.07:0,21,489	0/0:19,0:23:27.08:0,27,661	./.	1/1:5,4:10:3.01:42,3,0	1/1:21,1:24:0.88:2,1,0	0/0:9,0:9:6.02:0,6,167	0/1:13,1:14:54.97:55,0,91	0/0:22,0:22:24.08:0,24,719	0/0:8,0:8:21.07:0,21,596
chr10	7620757	.	T	TG	50.82	PASS	AC=10;AF=0.200;AN=50;BaseQRankSum=4.627;DP=353;FS=3.247;HRun=0;HaplotypeScore=35.1143;InbreedingCoeff=0.7794;MQ=74.65;MQ0=2;MQRankSum=-0.907;QD=7.26;ReadPosRankSum=-3.048;VQSLOD=2.3070;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	0/0:14,0:14:39.11:0,39,513	0/0:12,0:11:24.39:0,24,318	0/0:15,0:13:35.95:0,36,439	./.	0/0:16,0:16:45.15:0,45,629	0/0:10,0:10:27:0,27,337	1/1:1,0:1:3:26,3,0	0/0:11,0:11:33.09:0,33,430	1/1:0,1:1:3.01:35,3,0	1/1:2,0:2:5.98:50,6,0	0/0:13,0:13:39.10:0,39,524	0/0:19,0:19:57.16:0,57,747	0/0:17,0:17:48.12:0,48,649	1/1:0,2:2:3.01:30,3,0	./.	0/0:32,0:32:90.28:0,90,1222	1/1:0,1:1:3.01:39,3,0	0/0:15,0:14:42.09:0,42,535	0/0:18,0:18:54.17:0,54,737	0/0:10,0:9:27.08:0,27,361	0/0:18,0:18:54.16:0,54,724	0/0:20,0:20:54.15:0,54,707	0/0:25,0:25:72.15:0,72,919	0/0:27,0:27:81.25:0,81,1084	0/0:20,0:20:57.16:0,57,746	0/0:14,0:14:42.10:0,42,537	0/0:11,0:11:20:0,20,327
chr10	7620950	.	ACTCTGAG	A	5845.94	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=13.176;DP=489;FS=6.567;HRun=0;HaplotypeScore=124.7127;InbreedingCoeff=0.9607;MQ=87.36;MQ0=0;MQRankSum=-12.876;QD=52.20;ReadPosRankSum=0.311;VQSLOD=4.6246;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,5:5:12.04:302,12,0	0/0:6,0:6:18.06:0,18,635	0/0:21,0:21:57.17:0,57,1933	0/0:17,0:17:33.11:0,33,1194	1/1:4,18:22:41.98:791,42,0	0/0:23,0:23:69.24:0,69,2586	0/0:18,0:18:45.14:0,45,1556	1/1:5,9:14:24.04:523,24,0	0/0:20,0:20:60.21:0,60,2316	1/1:1,19:20:54.19:1358,54,0	1/1:5,12:17:36.12:870,36,0	0/0:20,0:20:60.21:0,60,2243	0/0:25,0:25:63.22:0,63,2331	0/0:19,0:19:54.18:0,54,1956	1/1:1,13:14:36.08:850,36,0	1/1:4,14:18:45.11:1076,45,0	0/0:33,0:33:93.32:0,93,3642	1/1:0,2:2:3.01:76,3,0	0/0:17,0:17:48.16:0,48,1800	0/0:20,0:20:54.17:0,54,1999	0/0:16,0:16:39.13:0,39,1351	0/0:17,0:17:48.16:0,48,1816	0/0:19,0:19:54.18:0,54,1923	0/0:21,0:21:60.21:0,60,2215	0/0:16,0:16:45.15:0,45,1716	0/0:21,0:21:60.21:0,60,2288	0/0:23,0:23:57.20:0,57,2178	0/0:5,0:5:15.05:0,15,588
chr10	7621024	.	A	ATGCTAAGCAAGCAGTCTGCCAAC	19363.84	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=3.509;DP=455;FS=28.103;HRun=0;HaplotypeScore=254.9526;InbreedingCoeff=0.8806;MQ=87.67;MQ0=0;MQRankSum=-12.955;QD=166.93;ReadPosRankSum=-0.398;VQSLOD=3.1102;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,0:6:15.03:689,15,0	0/0:8,0:8:24.08:0,24,1245	0/0:21,0:21:56.15:0,56,2796	0/0:24,0:24:63.21:0,63,3204	1/1:14,3:18:45.15:3152,45,0	0/0:25,0:25:75.26:0,75,4199	0/0:13,0:13:39.13:0,39,2234	1/1:14,0:14:33.11:2000,33,0	0/0:22,0:22:63.22:0,63,3483	1/1:10,5:17:51.13:4217,51,0	1/1:8,5:13:36.12:2991,36,0	0/0:14,0:14:42.13:0,42,2213	0/0:23,0:23:66.23:0,66,3626	0/0:18,0:18:54.19:0,54,3114	1/1:8,3:11:30.10:2218,30,0	1/1:10,3:13:39.13:3640,39,0	0/0:21,0:21:60.19:0,60,3332	1/1:3,0:3:2.80:188,3,0	0/0:20,0:20:57.20:0,57,3308	0/0:15,0:15:39.13:0,39,1969	0/0:11,0:11:33.11:0,33,2014	0/0:20,0:20:60.21:0,60,3446	0/0:25,0:25:72.23:0,72,4238	0/0:15,0:15:40.38:0,40,2294	0/0:16,0:16:48.16:0,48,2709	0/1:21,0:21:99:270,0,3465	0/0:22,0:22:66.19:0,66,3483	0/0:6,0:6:18.06:0,18,1114
chr10	7621490	.	C	CT	2069.80	PASS	AB=0.890;AC=23;AF=0.411;AN=56;BaseQRankSum=-7.302;DP=543;FS=0.930;HRun=13;HaplotypeScore=81.0396;InbreedingCoeff=0.7551;MQ=75.05;MQ0=0;MQRankSum=1.011;QD=8.38;ReadPosRankSum=-0.974;VQSLOD=2.6984;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:26:45.86:0,46,378	0/0:9,0:9:26.76:0,27,183	0/1:20,0:20:2.65:3,0,46	0/0:9,0:8:5.07:0,5,27	0/1:21,2:24:4.02:4,0,245	0/0:23,1:24:52.80:0,53,351	0/1:11,4:15:50.78:51,0,130	0/0:28,0:28:41.19:0,41,278	0/0:19,0:19:35.51:0,36,241	0/0:18,0:18:41.41:0,41,277	0/0:23,0:24:22.99:0,23,245	1/1:5,15:20:28:348,28,0	1/1:5,12:17:23.80:199,24,0	1/1:4,11:15:18.01:163,18,0	0/0:25,0:27:64.42:0,64,436	0/0:18,0:19:49.61:0,50,335	0/0:8,0:9:16.90:0,17,109	0/0:6,0:8:9.94:0,10,53	0/0:21,0:21:36.76:0,37,243	0/0:27,3:30:21.19:0,21,402	1/1:3,12:15:21.91:197,22,0	1/1:15,9:24:39.81:327,40,0	1/1:8,19:27:6.35:185,6,0	1/1:2,13:17:9.42:220,9,0	0/0:25,0:25:56.13:0,56,372	1/1:4,13:17:9.43:224,9,0	1/1:4,23:28:17.08:274,17,0	1/1:1,4:5:9.01:84,9,0
chr10	7624320	.	G	GTC	1803.04	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=2.788;DP=356;FS=4.453;HRun=0;HaplotypeScore=61.0033;InbreedingCoeff=0.5861;MQ=85.14;MQ0=1;MQRankSum=-4.693;QD=12.97;ReadPosRankSum=-2.117;VQSLOD=2.7725;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,9:17:41.99:612,42,0	0/0:2,0:2:6.02:0,6,88	0/0:30,0:26:42.02:0,42,684	0/0:19,0:18:33.93:0,34,383	1/1:12,0:13:11.77:120,12,0	0/0:13,0:13:36.07:0,36,486	0/0:15,0:15:45.13:0,45,622	1/1:8,0:8:14.01:169,14,0	0/0:17,0:17:48.15:0,48,685	1/1:14,0:14:35.94:339,36,0	1/1:12,0:12:15.04:170,15,0	0/1:15,0:15:22.28:22,0,27	0/1:8,0:7:2.28:2,0,15	1/1:10,0:10:8.49:27,8,0	1/1:6,0:6:12.03:136,12,0	0/1:9,0:9:17:230,0,17	0/0:17,0:17:51.12:0,51,657	1/1:8,0:8:14.95:152,15,0	0/0:13,0:13:35.33:0,35,492	0/0:20,0:20:56.30:0,56,695	0/0:11,0:11:27.08:0,27,167	0/1:7,0:7:17.64:18,0,40	0/0:6,0:6:0.13:0,0,35	0/0:5,0:5:5.98:0,6,48	0/0:26,0:26:72.10:0,72,966	0/1:12,0:12:0.65:1,0,82	0/0:17,0:17:34.53:0,35,166	0/0:5,0:5:11.86:0,12,42
chr10	7624404	.	TG	T	3787.94	PASS	AB=0.902;AC=30;AF=0.536;AN=56;BaseQRankSum=-2.303;DP=385;FS=4.366;HRun=10;HaplotypeScore=56.4262;InbreedingCoeff=0.5252;MQ=59.31;MQ0=1;MQRankSum=3.716;QD=13.72;ReadPosRankSum=5.266;VQSLOD=3.6499;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:21:28.52:84,29,0	0/1:3,1:4:17.04:17,0,50	0/0:16,0:14:18.62:0,19,182	0/1:11,1:10:33.32:33,0,69	0/0:4,0:8:18.90:0,19,141	0/0:11,0:11:6.92:0,7,279	0/1:16,4:20:62.11:62,0,290	0/0:4,0:10:11.52:0,12,63	0/0:13,2:15:4.01:0,4,263	0/0:11,0:13:23.71:0,24,177	0/0:1,0:4:2.84:0,3,14	1/1:0,14:14:29.99:260,30,0	1/1:1,12:13:35.99:312,36,0	1/1:3,14:17:40.55:342,41,0	0/0:1,0:12:19.89:0,20,99	0/0:6,0:12:23.48:0,23,126	1/1:5,26:31:38.80:566,39,0	0/1:7,1:14:2.25:2,0,104	0/1:11,1:12:2.01:2,0,197	0/1:8,0:8:16.87:17,0,49	1/1:6,32:39:77.47:654,77,0	1/1:5,6:11:23.99:208,24,0	1/1:2,7:9:0.37:135,0,0	1/1:1,16:17:35.97:312,36,0	0/0:7,0:8:17.86:0,18,164	1/1:2,17:19:50.99:443,51,0	1/1:0,7:7:21:182,21,0	1/1:0,8:8:18:156,18,0
chr10	7624882	.	ACT	A	1495.81	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=8.490;DP=667;FS=0.619;HRun=0;HaplotypeScore=76.3490;InbreedingCoeff=0.9425;MQ=61.87;MQ0=0;MQRankSum=-2.364;QD=32.52;ReadPosRankSum=1.328;VQSLOD=5.0994;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,42:46:97.67:1591,98,0	0/0:8,0:8:24.05:0,24,387	0/0:21,0:20:60.17:0,60,970	0/0:18,0:17:27.96:0,28,712	0/0:31,0:31:90.31:0,90,1664	0/0:35,0:35:99:0,99,1853	0/0:16,0:16:42.14:0,42,776	0/0:42,0:42:99:0,105,1841	0/0:19,0:19:57.20:0,57,1066	0/0:23,0:23:69.23:0,69,1264	0/0:22,0:22:66.23:0,66,1223	0/0:25,0:25:75.22:0,75,1322	0/0:24,0:24:72.25:0,72,1333	0/0:20,0:20:60.19:0,60,1092	0/0:30,0:30:87.26:0,87,1535	0/0:29,0:29:87.26:0,87,1535	0/0:21,0:21:60.16:0,60,1055	0/0:16,0:16:48.16:0,48,897	0/0:22,0:21:60.19:0,60,1067	0/0:22,0:22:57.19:0,57,1067	0/0:19,0:19:54.17:0,54,980	0/0:26,0:26:75.25:0,75,1371	0/0:30,0:30:87.26:0,87,1562	0/0:23,0:23:63.20:0,63,1132	0/0:24,0:24:72.21:0,72,1255	0/0:27,0:27:75.24:0,75,1345	0/0:25,0:25:75.24:0,75,1369	0/0:3,0:3:9.02:0,9,137
chr10	7626168	.	GT	G	3134.70	PASS	AB=0.950;AC=16;AF=0.286;AN=56;BaseQRankSum=14.617;DP=622;FS=7.922;HRun=10;HaplotypeScore=93.5462;InbreedingCoeff=0.8012;MQ=66.73;MQ0=3;MQRankSum=-2.458;QD=15.44;ReadPosRankSum=1.083;VQSLOD=3.5885;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,2:33:5.81:0,6,677	0/0:10,1:11:4.03:0,4,272	0/0:33,0:19:32.25:0,32,307	0/1:24,0:17:7.79:8,0,84	1/1:5,35:40:71.69:783,72,0	0/0:22,1:23:34.11:0,34,605	0/0:17,0:17:48.13:0,48,531	1/1:11,18:29:50.96:442,51,0	0/0:21,0:21:63.12:0,63,671	1/1:3,29:32:86.95:751,87,0	1/1:4,14:18:29.98:260,30,0	0/0:13,0:13:39.03:0,39,393	0/0:15,0:16:44.93:0,45,456	0/0:21,2:23:11:0,11,562	1/1:2,13:15:38.99:339,39,0	1/1:3,21:24:52.05:533,52,0	0/0:16,0:16:45.12:0,45,497	1/1:1,11:12:23.99:208,24,0	0/0:15,0:16:41.93:0,42,435	0/0:23,0:23:54.15:0,54,597	0/0:22,0:22:60.07:0,60,620	0/0:19,0:22:50.70:0,51,493	0/0:25,0:25:72.04:0,72,764	0/0:25,0:25:60.15:0,60,655	0/0:24,0:24:60.15:0,60,656	0/0:24,0:24:63.17:0,63,697	0/0:29,1:31:51.95:0,52,759	0/1:7,1:9:8.17:8,0,129
chr10	7627190	.	GAATT	G	5692.18	PASS	AB=0.606;AC=13;AF=0.241;AN=54;BaseQRankSum=9.940;DP=628;FS=1.029;HRun=0;HaplotypeScore=74.7385;InbreedingCoeff=0.8579;MQ=35.51;MQ0=138;MQRankSum=-2.776;QD=33.29;ReadPosRankSum=1.195;VQSLOD=4.4201;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:18:21.07:0,21,517	0/0:8,0:8:24.08:0,24,694	0/0:30,0:2:3.01:0,3,87	./.	1/1:2,35:34:57.15:1150,57,0	0/0:19,0:14:42.14:0,42,1189	0/0:17,0:10:18.06:0,18,441	1/1:5,8:6:18.06:373,18,0	0/0:19,0:16:24.08:0,24,641	1/1:6,26:23:63.22:1320,63,0	1/1:0,22:21:48.16:988,48,0	0/0:19,0:18:33.11:0,33,954	0/0:20,0:20:33.11:0,33,839	0/0:20,0:19:21.07:0,21,527	1/1:3,23:24:39.13:817,39,0	1/1:3,18:18:35.91:754,36,0	0/0:27,0:13:24.08:0,24,606	0/1:7,13:12:99:290,0,225	0/0:24,0:15:45.15:0,45,1236	0/0:20,0:19:51.10:0,51,1271	0/0:18,0:9:18.06:0,18,507	0/0:19,0:19:33.11:0,33,906	0/0:27,0:26:45.15:0,45,1229	0/0:21,0:12:21.07:0,21,595	0/0:26,0:24:51.18:0,51,1414	0/0:26,0:23:69.24:0,69,1932	0/0:37,0:32:51.07:0,51,1436	0/0:18,0:12:18.06:0,18,521
chr10	7627420	.	C	CT	4722.24	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-10.162;DP=542;FS=13.111;HRun=7;HaplotypeScore=46.7364;InbreedingCoeff=0.9777;MQ=53.38;MQ0=5;MQRankSum=-1.827;QD=26.53;ReadPosRankSum=-1.371;VQSLOD=3.6912;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,14:14:24.07:290,24,0	0/0:6,0:6:9.01:0,9,87	0/0:18,0:11:27.03:0,27,255	0/0:14,0:6:11.40:0,11,83	1/1:3,21:24:57.17:688,57,0	0/0:24,0:24:66.10:0,66,636	0/0:15,0:16:42.06:0,42,400	1/1:8,29:34:78.20:915,78,0	0/0:14,0:14:36.04:0,36,341	1/1:3,20:23:57.16:676,57,0	1/1:1,24:25:60.18:724,60,0	0/0:18,0:18:54.09:0,54,521	0/0:21,0:21:60.10:0,60,579	0/0:15,0:15:45.07:0,45,434	1/1:0,22:22:57.17:685,57,0	1/1:4,16:20:45.14:544,45,0	0/0:23,0:23:51.06:0,51,485	1/1:5,5:10:18.01:201,18,0	0/0:18,1:18:14.81:0,15,416	0/0:30,0:30:84.13:0,84,810	0/0:6,0:6:18.03:0,18,174	0/0:16,0:16:36.05:0,36,348	0/0:21,0:21:57.09:0,57,549	0/0:16,0:16:42.05:0,42,399	0/0:16,0:16:39.06:0,39,377	0/0:39,1:41:74.91:0,75,998	0/0:22,0:22:66.11:0,66,637	0/0:8,0:8:21.03:0,21,203
chr10	7628002	.	T	TA	7863.14	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=2.017;DP=628;FS=10.045;HRun=1;HaplotypeScore=61.6204;InbreedingCoeff=0.9723;MQ=55.85;MQ0=14;MQRankSum=-0.024;QD=38.36;ReadPosRankSum=0.135;VQSLOD=4.7343;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,21:23:21.26:806,21,0	0/0:14,0:14:42.12:0,42,530	0/0:21,0:6:12.04:0,12,152	0/0:32,0:7:15.98:0,16,189	1/1:2,27:28:78.26:1156,78,0	0/0:30,0:29:87.28:0,87,1128	0/0:12,0:12:36.09:0,36,439	1/1:3,41:43:99:1637,111,0	0/0:20,0:20:60.19:0,60,767	1/1:0,25:25:75.25:1103,75,0	1/1:0,24:24:69.19:998,69,0	0/0:14,0:14:42.14:0,42,545	0/0:23,0:23:69.22:0,69,895	0/0:17,0:17:51.16:0,51,650	1/1:0,19:19:54.18:809,54,0	1/1:1,16:17:42.14:630,42,0	0/0:24,0:24:63.19:0,63,788	1/1:3,21:24:15.36:725,15,0	0/0:25,0:20:60.19:0,60,766	0/0:35,0:35:99:0,102,1301	0/0:3,0:3:6.02:0,6,78	0/0:19,0:19:57.19:0,57,739	0/0:22,0:22:63.20:0,63,817	0/0:23,0:21:63.18:0,63,789	0/0:23,0:23:66.21:0,66,856	0/0:21,0:21:60.19:0,60,778	0/0:33,0:33:99:0,99,1281	0/0:12,0:12:36.12:0,36,467
chr10	7631330	.	A	ACACACC	2807.12	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=0.228;DP=332;FS=8.369;HRun=0;HaplotypeScore=81.3498;InbreedingCoeff=0.5871;MQ=83.77;MQ0=3;MQRankSum=-3.831;QD=14.93;ReadPosRankSum=-0.088;VQSLOD=1.2830;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:15:12.50:156,13,0	0/0:4,0:4:3.01:0,3,60	0/0:24,0:18:3.01:0,3,46	0/0:35,0:25:6:0,6,62	1/1:12,0:12:6.02:163,6,0	0/0:5,0:5:6.01:0,6,85	0/0:21,0:20:18.04:0,18,311	1/1:24,0:24:6.02:98,6,0	0/0:9,0:9:9.03:0,9,163	1/1:10,0:9:3.01:53,3,0	1/1:13,0:13:3.87:37,4,0	1/1:6,3:9:9.03:287,9,0	1/1:6,0:6:3.01:89,3,0	1/1:1,4:5:2.88:96,3,0	1/1:11,1:12:15.05:478,15,0	1/1:5,4:9:9.03:288,9,0	0/0:8,0:8:4.26:0,4,64	1/1:6,0:6:3.01:63,3,0	0/0:14,0:14:9.03:0,9,159	0/0:10,0:10:12.03:0,12,188	1/1:14,0:14:2.86:24,3,0	1/1:8,2:11:5.62:166,6,0	1/1:3,4:7:5.32:107,5,0	1/1:10,1:10:12.04:255,12,0	0/0:13,0:13:15.05:0,15,302	1/1:10,3:13:18.06:436,18,0	1/1:6,2:8:2.90:96,3,0	1/1:1,1:2:3.01:96,3,0
chr10	7631413	.	GA	G	62.09	PASS	AB=0.720;AC=1;AF=0.018;AN=56;BaseQRankSum=0.166;DP=353;FS=5.192;HRun=1;HaplotypeScore=40.0348;InbreedingCoeff=-0.0456;MQ=49.47;MQ0=27;MQRankSum=1.570;QD=3.45;ReadPosRankSum=-0.872;VQSLOD=-0.2991;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:11,7:17:99:136,0,128	0/0:4,0:4:9.02:0,9,101	0/0:29,0:4:5.97:0,6,65	0/0:51,0:8:13.70:0,14,133	0/0:12,0:12:29.99:0,30,438	0/0:12,0:12:24.07:0,24,306	0/0:11,0:11:18.05:0,18,211	0/0:22,0:22:63.19:0,63,847	0/0:7,0:7:6.02:0,6,68	0/0:14,0:12:33.99:0,34,428	0/0:10,0:10:18.06:0,18,234	0/0:4,0:4:3.01:0,3,48	0/0:4,0:4:6.49:0,6,96	0/0:8,0:8:18.06:0,18,244	0/0:12,0:11:18.05:0,18,230	0/0:9,0:9:24.07:0,24,297	0/0:11,0:11:23.76:0,24,313	0/0:5,0:3:6.02:0,6,76	0/0:15,0:14:39.12:0,39,482	0/0:5,0:5:12.04:0,12,159	0/0:18,0:17:42.13:0,42,555	0/0:13,0:13:24.08:0,24,323	0/0:6,0:6:18.06:0,18,248	0/0:15,0:13:30.09:0,30,385	0/0:8,0:8:21.07:0,21,276	0/0:10,0:9:27.09:0,27,366	0/0:11,0:11:27.09:0,27,367	0/0:9,0:8:22.62:0,23,279
chr10	7632986	.	GA	G	6446.42	PASS	AB=0.909;AC=15;AF=0.268;AN=56;BaseQRankSum=13.106;DP=629;FS=2.866;HRun=1;HaplotypeScore=63.1463;InbreedingCoeff=0.9086;MQ=85.83;MQ0=0;MQRankSum=-5.663;QD=34.29;ReadPosRankSum=-1.318;VQSLOD=4.2422;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:88.85:0,89,1394	0/0:21,0:21:63.16:0,63,932	0/0:18,0:18:47.33:0,47,752	0/0:22,0:22:60.20:0,60,909	1/1:0,26:26:69.22:922,69,0	0/0:20,0:20:60.20:0,60,955	0/0:24,0:24:72.25:0,72,1151	1/1:0,35:35:99:1467,105,0	0/0:30,0:30:90.28:0,90,1390	1/1:0,22:22:66.22:915,66,0	1/1:0,18:18:45.15:607,45,0	0/0:21,0:21:63.21:0,63,1007	0/0:17,0:17:51.16:0,51,792	0/0:15,0:15:45.15:0,45,713	1/1:0,26:26:72.24:1007,72,0	1/1:1,24:25:21.28:875,21,0	0/0:22,0:22:66.16:0,66,972	1/1:0,16:16:45.15:629,45,0	0/0:19,0:19:57.18:0,57,863	0/0:26,0:26:78.27:0,78,1246	0/0:30,0:30:90.31:0,90,1436	0/0:17,0:17:51.14:0,51,766	0/0:18,0:18:54.18:0,54,860	0/0:17,0:17:51.17:0,51,807	0/0:21,0:21:60.18:0,60,914	0/1:18,2:20:23.74:24,0,781	0/0:34,0:34:99:0,102,1591	0/0:19,0:19:57.17:0,57,877
chr10	7633464	.	T	TG	8089.41	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-15.840;DP=676;FS=0.000;HRun=1;HaplotypeScore=59.0094;InbreedingCoeff=0.9995;MQ=86.47;MQ0=0;MQRankSum=-1.040;QD=40.86;ReadPosRankSum=0.976;VQSLOD=5.2354;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,19:20:51.17:764,51,0	0/0:18,0:18:48.16:0,48,623	0/0:27,0:26:66.19:0,66,816	0/0:19,0:19:52.64:0,53,618	1/1:1,26:27:75.25:1106,75,0	0/0:21,0:21:63.16:0,63,798	0/0:19,0:19:57.15:0,57,710	1/1:3,21:24:63.21:943,63,0	0/0:23,0:23:69.19:0,69,867	1/1:0,31:31:90.29:1320,90,0	1/1:0,29:29:78.26:1168,78,0	0/0:26,0:26:78.24:0,78,999	0/0:23,0:23:69.21:0,69,880	0/0:22,0:22:66.21:0,66,856	1/1:0,31:31:90.30:1349,90,0	1/1:1,25:26:72.24:1079,72,0	0/0:25,0:25:75.24:0,75,972	1/1:1,9:10:24.08:359,24,0	0/0:22,0:22:63.18:0,63,802	0/0:27,0:27:81.25:0,81,1038	0/0:23,0:23:69.22:0,69,896	0/0:20,0:20:54.16:0,54,687	0/0:32,0:32:96.31:0,96,1246	0/0:12,0:12:36.11:0,36,454	0/0:23,0:23:69.20:0,69,867	0/0:38,2:40:27.43:0,27,1339	0/0:33,0:32:99:0,99,1249	0/0:23,0:23:66.20:0,66,844
chr10	7633948	.	AGTGT	A	1102.22	PASS	AB=0.924;AC=19;AF=0.339;AN=56;BaseQRankSum=6.033;DP=654;FS=1.453;HRun=0;HaplotypeScore=141.1046;InbreedingCoeff=0.4563;MQ=63.79;MQ0=16;MQRankSum=-5.672;QD=4.92;ReadPosRankSum=0.686;VQSLOD=2.8050;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:12,13:29:6.38:98,6,0	0/0:7,0:7:18:0,18,295	0/0:64,0:22:14.66:0,15,117	0/0:53,0:20:8.93:0,9,76	1/1:20,0:20:24.02:277,24,0	0/0:23,0:23:33.08:0,33,523	0/0:29,0:29:39.43:0,39,720	0/0:28,0:28:12.38:0,12,260	0/0:17,0:17:29.89:0,30,607	0/1:17,0:17:27.02:120,0,27	0/1:22,0:22:59.96:60,0,60	1/1:7,11:20:15.04:217,15,0	0/0:7,6:14:2.74:0,3,12	1/1:7,8:16:6.08:85,6,0	1/1:11,0:11:2.48:33,2,0	0/1:9,0:9:27.18:27,0,41	0/0:16,0:19:47.63:0,48,930	0/1:19,0:19:77.83:106,0,78	0/0:27,0:27:34.57:0,35,519	0/0:18,0:17:35.72:0,36,505	0/0:25,0:39:2.86:0,3,24	0/1:10,15:26:1.69:112,0,2	1/1:8,4:12:9.02:107,9,0	1/1:8,15:23:3.48:40,3,0	0/0:15,0:15:35.84:0,36,665	0/0:21,0:33:57.14:0,57,748	0/0:8,0:16:6.02:0,6,116	0/0:20,0:28:25.24:0,25,318
chr10	7633976	.	TGTGC	T	1618.13	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=4.229;DP=526;FS=2.781;HRun=0;HaplotypeScore=139.8095;InbreedingCoeff=0.4336;MQ=55.40;MQ0=11;MQRankSum=-4.899;QD=6.97;ReadPosRankSum=1.677;VQSLOD=2.9431;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:24:54.97:55,0,66	0/0:6,0:6:12.01:0,12,184	0/0:23,0:8:1.65:0,2,40	0/0:36,0:8:2.17:0,2,53	1/1:2,17:19:24.07:413,24,0	0/0:14,0:14:38.69:0,39,507	0/0:21,0:21:41.99:0,42,755	1/1:22,0:22:22.90:146,23,0	0/0:14,0:14:36.15:0,36,628	1/1:1,18:19:50.46:500,50,0	1/1:4,19:23:6.01:109,6,0	1/1:15,0:15:0.72:124,1,0	0/0:13,0:13:8.71:0,9,56	0/1:19,0:19:28.68:29,0,75	1/1:2,6:8:2.51:51,3,0	1/1:3,3:6:3.01:54,3,0	0/0:23,0:23:65.89:0,66,1050	1/1:4,13:17:11.76:216,12,0	0/0:25,0:24:53.79:0,54,687	0/0:26,0:25:47.18:0,47,583	0/0:26,0:26:17.56:0,18,119	0/1:24,0:24:56.95:57,0,121	0/1:16,0:16:39.82:40,0,104	0/1:20,0:20:7.50:8,0,54	0/0:16,0:16:44.87:0,45,741	0/0:23,0:23:61.84:0,62,824	0/0:9,0:9:8.94:0,9,123	0/0:19,0:19:38.68:0,39,433
chr10	7634485	.	TTAAGAGA	T	4433.98	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=10.724;DP=726;FS=1.741;HRun=0;HaplotypeScore=163.8820;InbreedingCoeff=0.9975;MQ=93.75;MQ0=0;MQRankSum=-11.168;QD=65.21;ReadPosRankSum=0.684;VQSLOD=5.2313;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,108,4164	0/0:18,0:18:54.18:0,54,2166	0/0:33,0:33:96.27:0,96,3440	0/0:34,0:34:99:0,102,3640	0/0:34,0:34:99:0,99,3785	0/0:28,0:28:84.25:0,84,3176	0/0:21,0:21:63.22:0,63,2576	0/0:28,0:28:84.29:0,84,3428	0/0:35,0:35:99:0,105,4212	0/0:37,0:37:99:0,111,4336	0/0:20,0:20:57.20:0,57,2251	0/0:16,0:16:48.16:0,48,1967	0/0:34,0:34:99:0,102,4031	0/0:27,0:27:81.27:0,81,3224	0/0:42,0:42:99:0,126,5152	0/0:31,0:31:93.32:0,93,3784	0/0:18,0:18:54.19:0,54,2186	0/0:21,0:21:63.22:0,63,2578	0/0:16,0:16:48.16:0,48,1968	0/0:23,0:23:66.23:0,66,2736	1/1:0,14:14:17.81:502,18,0	0/0:28,0:28:84.29:0,84,3384	0/0:25,0:25:75.24:0,75,2963	0/0:23,0:23:69.24:0,69,2778	0/0:29,0:28:87.29:0,87,3460	1/1:0,16:16:48.16:1274,48,0	1/1:0,28:28:66.01:1841,66,0	1/1:0,10:10:30.10:816,30,0
chr10	7634915	.	CA	C	990.04	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.712;DP=615;FS=0.724;HRun=1;HaplotypeScore=61.9863;InbreedingCoeff=0.9988;MQ=85.82;MQ0=0;MQRankSum=-4.084;QD=36.67;ReadPosRankSum=0.762;VQSLOD=3.9562;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,27:27:78.26:1085,78,0	0/0:13,0:13:39.11:0,39,597	0/0:19,0:19:57.19:0,57,889	0/0:29,0:29:71.02:0,71,1114	0/0:36,0:36:99:0,108,1676	0/0:28,0:28:81.28:0,81,1294	0/0:25,0:25:75.24:0,75,1176	0/0:36,0:36:99:0,105,1597	0/0:16,0:16:45.15:0,45,719	0/0:27,0:27:78.27:0,78,1246	0/0:22,0:22:66.23:0,66,1053	0/0:10,0:10:30.10:0,30,480	0/0:27,0:27:78.25:0,78,1223	0/0:18,0:18:54.18:0,54,863	0/0:28,0:28:84.27:0,84,1319	0/0:14,0:14:42.14:0,42,671	0/0:23,0:23:69.19:0,69,1032	0/0:10,0:10:30.10:0,30,479	0/0:17,0:17:51.17:0,51,815	0/0:26,0:26:78.27:0,78,1246	0/0:14,0:14:42.13:0,42,646	0/0:20,0:20:60.19:0,60,937	0/0:25,0:25:75.24:0,75,1175	0/0:15,0:15:45.14:0,45,695	0/0:22,0:22:66.23:0,66,1053	0/0:25,0:25:75.23:0,75,1154	0/0:30,0:30:87.27:0,87,1342	0/0:13,0:13:39.13:0,39,623
chr10	7637226	.	TG	T	5402.24	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=12.114;DP=541;FS=7.073;HRun=5;HaplotypeScore=61.2312;InbreedingCoeff=0.9942;MQ=67.18;MQ0=4;MQRankSum=-1.603;QD=30.87;ReadPosRankSum=0.056;VQSLOD=5.2910;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,42:40:99:1330,120,0	0/0:9,0:8:18.06:0,18,246	0/0:14,0:9:24.08:0,24,328	0/0:19,0:16:39.12:0,39,513	1/1:0,20:20:54.15:612,54,0	0/0:20,0:20:36.07:0,36,469	0/0:18,0:18:48.16:0,48,644	1/1:2,28:29:75.21:848,75,0	0/0:16,0:16:42.12:0,42,556	1/1:0,14:14:42.12:476,42,0	1/1:0,14:13:36.10:406,36,0	0/0:20,0:19:48.16:0,48,649	0/0:14,0:14:36.12:0,36,491	0/0:19,0:19:42.13:0,42,554	1/1:0,22:22:63.18:712,63,0	1/1:0,14:14:42.12:474,42,0	0/0:32,0:32:81.27:0,81,1107	1/1:1,18:19:48.14:544,48,0	0/0:17,0:17:45.15:0,45,615	0/0:14,0:14:42.13:0,42,561	0/0:33,0:32:78.24:0,78,1048	0/0:16,0:16:39.04:0,39,504	0/0:13,0:13:27.09:0,27,369	0/0:24,0:23:51.17:0,51,697	0/0:13,0:13:36.12:0,36,492	0/0:16,1:17:14.26:0,14,580	0/0:27,0:27:75.23:0,75,1008	0/0:11,0:10:21.07:0,21,278
chr10	7637297	.	GA	G	2943.91	PASS	AB=0.635;AC=33;AF=0.589;AN=56;BaseQRankSum=-10.501;DP=511;FS=2.922;HRun=11;HaplotypeScore=78.6653;InbreedingCoeff=0.7104;MQ=52.68;MQ0=20;MQRankSum=1.623;QD=9.50;ReadPosRankSum=7.138;VQSLOD=2.5696;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:35:20.23:0,20,297	1/1:5,6:10:17.88:143,18,0	0/0:7,2:3:2.94:0,3,18	0/0:6,0:2:3.74:0,4,12	0/0:17,0:23:31.27:0,31,188	1/1:2,13:15:17.97:147,18,0	0/1:4,8:12:8.03:148,0,8	0/0:19,0:28:46.38:0,46,260	1/1:2,10:12:14.98:123,15,0	0/0:19,0:21:27.85:0,28,171	0/0:13,0:15:12.23:0,12,110	1/1:10,5:15:14.93:117,15,0	1/1:7,7:12:10.64:79,11,0	1/1:3,16:19:29.91:241,30,0	0/0:19,0:23:44.07:0,44,253	0/0:10,0:14:27.14:0,27,135	1/1:13,13:27:52.72:403,53,0	0/0:12,0:14:19.92:0,20,106	0/1:11,9:18:5.25:150,0,5	1/1:9,9:16:29.59:221,30,0	1/1:6,13:19:23.96:196,24,0	1/1:9,10:18:9.13:114,9,0	0/1:6,10:13:17.05:82,0,17	1/1:7,13:19:26.94:221,27,0	1/1:5,9:14:17.67:147,18,0	1/1:11,10:20:6.48:186,6,0	1/1:5,15:21:34.98:275,35,0	1/1:5,10:13:10.10:157,10,0
chr10	7637309	.	G	GA	353.51	PASS	AB=0.994;AC=9;AF=0.161;AN=56;BaseQRankSum=-0.418;DP=543;FS=3.722;HRun=12;HaplotypeScore=81.8753;InbreedingCoeff=0.0851;MQ=56.78;MQ0=17;MQRankSum=-1.742;QD=2.06;ReadPosRankSum=0.223;VQSLOD=-0.5213;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:22,10:30:13.79:383,14,0	0/1:12,0:11:4.81:5,0,93	0/0:14,0:7:4.53:0,5,75	0/1:10,0:5:1.39:1,0,37	0/1:23,0:22:56.27:56,0,146	0/0:15,0:16:22.40:0,22,144	0/0:15,0:15:2.69:0,3,173	0/0:34,1:34:37.90:0,38,368	0/0:14,0:14:9.94:0,10,131	0/0:17,0:18:17.29:0,17,170	0/0:13,0:12:23.11:0,23,148	0/0:14,0:14:14.67:0,15,99	0/0:11,0:8:11.57:0,12,73	0/0:23,0:24:33.59:0,34,219	0/0:21,1:21:42.98:0,43,274	0/0:16,0:15:5.78:0,6,143	0/1:31,0:32:12.15:12,0,301	0/1:13,0:12:4.57:5,0,82	0/0:19,0:18:37.18:0,37,256	0/0:23,1:22:13.90:0,14,332	0/0:14,0:14:26.85:0,27,195	0/0:18,0:17:39.45:0,39,262	0/0:22,0:19:32.58:0,33,210	0/0:19,0:19:23.32:0,23,257	0/1:19,0:19:13.63:14,0,194	0/1:28,0:28:0.32:0,0,330	0/0:24,0:24:42.36:0,42,355	0/0:13,0:15:21.37:0,21,157
chr10	7637582	.	AGTTTTGTTTT	A	737.31	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.290;DP=576;FS=4.266;HRun=0;HaplotypeScore=170.5285;InbreedingCoeff=0.9836;MQ=76.95;MQ0=2;MQRankSum=-5.722;QD=27.31;ReadPosRankSum=-0.833;VQSLOD=3.0957;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,16:27:36.12:832,36,0	0/0:10,0:10:27.09:0,27,1348	0/0:19,0:16:21.07:0,21,732	0/0:39,0:31:57.99:0,58,2061	0/0:29,0:29:66.23:0,66,3132	0/0:13,0:13:33.10:0,33,1532	0/0:11,0:11:27.09:0,27,1321	0/0:33,0:33:69.22:0,69,3032	0/0:23,0:23:45.15:0,45,2276	0/0:29,0:29:57.20:0,57,2524	0/0:18,0:17:42.14:0,42,1915	0/0:16,0:16:42.14:0,42,1975	0/0:14,0:14:36.12:0,36,1647	0/0:17,0:17:42.14:0,42,2122	0/0:17,0:17:42.14:0,42,2063	0/0:20,0:20:45.14:0,45,2107	0/0:16,0:16:33.11:0,33,1578	0/0:9,0:9:27.08:0,27,1140	0/0:20,0:20:39.12:0,39,1789	0/0:25,0:25:54.19:0,54,2516	0/0:24,0:24:54.19:0,54,2670	0/0:18,0:18:45.15:0,45,2022	0/0:17,0:17:30.10:0,30,1488	0/0:19,0:19:42.09:0,42,1870	0/0:16,0:16:39.13:0,39,1865	0/0:37,0:37:84.28:0,84,4045	0/0:31,0:31:60.21:0,60,2926	0/0:9,0:9:18.06:0,18,865
chr10	7639489	.	G	GA	3453.91	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-1.158;DP=635;FS=11.919;HRun=9;HaplotypeScore=84.4945;InbreedingCoeff=0.9789;MQ=80.13;MQ0=0;MQRankSum=-2.341;QD=25.40;ReadPosRankSum=3.072;VQSLOD=3.4722;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:31:59.61:0,60,627	0/0:7,0:7:20.97:0,21,177	0/0:22,0:23:50:0,50,422	0/0:12,0:13:28.88:0,29,226	0/0:22,0:22:32.66:0,33,444	0/0:21,0:21:56.99:0,57,495	0/0:17,1:18:11.81:0,12,331	0/0:19,0:19:41.98:0,42,365	0/0:25,0:26:74.02:0,74,631	0/0:34,0:35:86.01:0,86,735	0/0:19,0:19:50.98:0,51,443	1/1:5,19:24:8.45:546,8,0	1/1:4,16:20:48.13:527,48,0	1/1:3,14:18:44.95:479,45,0	0/0:21,0:21:56.96:0,57,491	0/0:22,0:22:59.95:0,60,515	0/0:23,0:22:62.96:0,63,541	0/0:19,0:19:53.98:0,54,469	0/0:18,0:18:44.96:0,45,387	0/0:33,0:33:89.97:0,90,781	0/0:18,0:18:44.97:0,45,390	1/1:2,25:27:75.20:825,75,0	1/1:4,26:31:69.49:745,69,0	1/1:1,15:16:30.08:332,30,0	0/0:33,0:33:80.95:0,81,703	0/0:32,0:32:74.93:0,75,645	0/0:24,0:24:53.97:0,54,469	0/0:22,0:22:59.94:0,60,516
chr10	7640086	.	A	AGGAGGGAG	2051.02	PASS	AB=0.789;AC=22;AF=0.440;AN=50;BaseQRankSum=-5.058;DP=238;FS=9.068;HRun=0;HaplotypeScore=60.0789;InbreedingCoeff=0.5910;MQ=65.48;MQ0=3;MQRankSum=-5.778;QD=25.01;ReadPosRankSum=1.364;VQSLOD=1.8402;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,10:18:9.03:300,9,0	0/0:5,0:5:9.03:0,9,236	0/0:14,0:6:14.97:0,15,333	0/0:29,0:23:50.97:0,51,880	1/1:3,3:6:9.03:376,9,0	0/0:6,0:5:17.62:0,18,343	0/0:13,0:13:36.07:0,36,779	1/1:8,0:8:6.01:87,6,0	0/0:9,0:9:21.06:0,21,499	1/1:4,1:5:3.01:127,3,0	1/1:2,2:4:3.01:127,3,0	./.	./.	1/1:2,0:2:3.01:50,3,0	1/1:3,1:5:6.02:251,6,0	1/1:2,0:2:2.97:20,3,0	0/0:18,0:18:27.09:0,27,639	1/1:3,4:7:6.02:253,6,0	0/1:10,0:6:11.95:12,0,271	0/0:12,0:12:30.10:0,30,754	0/0:19,0:19:33.08:0,33,722	./.	1/1:2,2:4:3.01:127,3,0	0/1:3,8:11:12.93:493,0,13	0/0:8,0:8:21.06:0,21,469	0/0:13,0:13:30.09:0,30,739	0/0:6,0:6:18.03:0,18,367	0/0:1,0:1:3.01:0,3,79
chr10	7640137	.	AG	A	470.93	PASS	AB=0.889;AC=38;AF=0.905;AN=42;BaseQRankSum=2.056;DP=77;FS=0.000;HRun=3;HaplotypeScore=23.0944;InbreedingCoeff=0.0968;MQ=47.48;MQ0=1;MQRankSum=0.769;QD=6.45;ReadPosRankSum=2.986;VQSLOD=0.5997;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	1/1:1,0:1:2.04:6,2,0	./.	0/1:5,0:2:13.63:14,0,14	1/1:1,0:1:2.04:6,2,0	1/1:7,0:6:11.14:48,11,0	1/1:4,0:4:6.51:33,7,0	1/1:1,0:1:2.97:20,3,0	1/1:3,0:3:5.02:28,5,0	1/1:1,0:1:2.04:6,2,0	./.	1/1:1,0:1:2.04:6,2,0	1/1:0,1:1:2.22:7,2,0	1/1:1,0:1:2.88:15,3,0	./.	0/0:1,0:1:2.98:0,3,21	1/1:7,0:7:4.07:12,4,0	1/1:1,0:1:2.98:21,3,0	1/1:2,0:2:2.68:15,3,0	1/1:5,0:5:9.11:45,9,0	1/1:15,0:14:29.15:170,29,0	./.	./.	1/1:1,0:1:2.99:23,3,0	0/1:7,0:7:13.44:13,0,15	1/1:0,4:4:5.87:35,6,0	1/1:3,0:3:8.73:49,9,0	./.
chr10	7641292	.	C	CAA	8914.93	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=12.327;DP=694;FS=0.966;HRun=8;HaplotypeScore=118.9493;InbreedingCoeff=0.9993;MQ=72.89;MQ0=1;MQRankSum=-1.868;QD=23.04;ReadPosRankSum=0.076;VQSLOD=3.6004;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,0:35:69.12:669,69,0	0/0:13,0:13:36.09:0,36,401	0/0:23,0:18:20.64:0,21,234	0/0:29,0:27:38.91:0,39,459	1/1:4,23:29:75.22:1134,75,0	0/0:19,0:19:51.13:0,51,569	0/0:14,0:14:39.10:0,39,428	1/1:10,30:41:90.28:1381,90,0	0/0:18,0:18:54.11:0,54,582	1/1:3,26:30:78.24:1183,78,0	1/1:1,28:30:84.24:1298,84,0	1/1:1,0:19:42.42:146,42,0	1/1:2,0:28:53.82:187,54,0	1/1:4,0:27:57.39:197,57,0	1/1:4,21:25:57.19:905,57,0	1/1:3,17:20:45.15:714,45,0	0/0:18,0:18:51.14:0,51,568	1/1:3,13:16:29.75:476,30,0	0/0:23,0:23:54.13:0,54,601	0/0:20,0:20:57.08:0,57,603	0/0:25,0:25:69.16:0,69,759	1/1:2,0:27:57.39:197,57,0	1/1:3,0:28:57.20:197,57,0	1/1:3,0:31:67.37:232,67,0	0/0:25,0:25:75.18:0,75,824	0/0:30,0:29:81.22:0,81,903	0/0:30,0:31:80.94:0,81,881	0/0:19,0:19:54.15:0,54,602
chr10	7641950	.	T	TAGACAGAC	2395.29	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=4.154;DP=742;FS=23.239;HRun=0;HaplotypeScore=251.3359;InbreedingCoeff=0.9194;MQ=57.60;MQ0=5;MQRankSum=-5.220;QD=12.10;ReadPosRankSum=-1.795;VQSLOD=0.8556;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:33,0:33:12.64:231,13,0	0/0:6,0:6:15.05:0,15,385	0/0:24,0:23:21.06:0,21,446	0/0:27,0:26:24.07:0,24,453	0/0:28,0:28:59.84:0,60,1279	0/0:30,0:30:75.26:0,75,1843	0/0:19,0:18:30.10:0,30,765	0/0:33,0:33:54.17:0,54,1181	0/0:19,0:18:42.13:0,42,999	0/0:33,0:33:73.48:0,73,1685	0/0:15,0:15:15.05:0,15,358	1/1:28,0:28:26.44:687,26,0	1/1:34,0:34:39.09:999,39,0	1/1:33,0:33:9.49:190,9,0	0/0:30,0:30:51.15:0,51,1169	0/0:32,0:32:75.26:0,75,1789	0/0:24,0:24:39.07:0,39,913	0/0:28,0:28:54.09:0,54,1277	0/0:32,0:30:60.11:0,60,1160	0/0:28,0:27:51.14:0,51,1194	0/0:25,0:25:39.12:0,39,898	1/1:15,10:24:2.99:24,3,0	1/1:25,0:25:6.02:157,6,0	1/1:20,0:20:12.28:290,12,0	0/0:29,0:29:48.02:0,48,1213	0/0:26,0:26:57.14:0,57,1250	0/0:37,0:37:78.25:0,78,1826	0/0:18,0:18:33.06:0,33,621
chr10	7641973	.	A	AC	810.22	PASS	AB=0.634;AC=7;AF=0.125;AN=56;BaseQRankSum=7.889;DP=694;FS=18.566;HRun=0;HaplotypeScore=181.5184;InbreedingCoeff=0.2419;MQ=53.28;MQ0=7;MQRankSum=-5.963;QD=5.30;ReadPosRankSum=-4.008;VQSLOD=1.4078;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:14,12:26:25.65:142,0,26	0/0:8,0:8:9.08:0,9,203	0/0:8,0:8:21.07:0,21,281	0/0:9,0:9:24.06:0,24,292	0/0:35,0:35:83.32:0,83,939	0/0:33,0:33:67.41:0,67,1034	0/0:19,0:18:32.39:0,32,426	0/0:37,0:36:99:0,105,1462	0/0:21,0:20:45.15:0,45,623	0/0:34,0:34:99:0,100,1321	0/0:10,0:10:17.86:0,18,216	0/1:11,14:30:26.18:248,0,26	0/1:11,17:29:1.64:348,0,2	0/1:10,18:30:32.10:38,0,32	0/0:26,0:26:54.18:0,54,747	0/0:36,0:36:82.52:0,83,1124	0/0:25,0:25:37.37:0,37,654	0/0:30,0:29:59.94:0,60,835	0/0:36,0:34:99:0,99,1343	0/0:26,0:25:61.95:0,62,770	0/0:19,0:18:45.04:0,45,553	0/0:16,1:18:10.03:0,10,93	0/1:11,8:23:54.97:55,0,67	1/1:10,3:15:8.68:111,9,0	0/0:33,0:33:31.78:0,32,681	0/0:34,0:34:99:0,102,1163	0/0:30,0:30:81.22:0,81,1081	0/0:13,0:13:33.11:0,33,434
chr10	7641974	.	TGATA	T	2805.45	PASS	AB=0.654;AC=19;AF=0.365;AN=52;BaseQRankSum=-7.746;DP=715;FS=23.881;HRun=0;HaplotypeScore=204.5352;InbreedingCoeff=0.7342;MQ=53.61;MQ0=8;MQRankSum=-3.399;QD=11.69;ReadPosRankSum=3.394;VQSLOD=1.7445;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:26:3.48:0,3,53	0/0:6,0:9:8.94:0,9,67	./.	./.	0/0:16,0:36:49.50:0,50,550	0/0:27,0:36:6.46:0,6,48	0/0:17,0:18:3:0,3,29	0/0:39,0:37:3.01:0,3,45	0/0:10,0:22:15.05:0,15,262	0/0:14,0:36:66.20:0,66,1089	0/0:5,0:10:7.08:0,7,64	1/1:21,9:30:8.32:113,8,0	1/1:19,10:29:23.96:321,24,0	1/1:22,7:29:9:139,9,0	0/0:13,0:26:18.06:0,18,311	0/0:20,0:38:33.10:0,33,539	0/0:19,0:26:20.88:0,21,236	0/0:20,0:31:12.30:0,12,283	0/0:23,0:35:45.10:0,45,681	0/0:16,0:27:28.25:0,28,335	1/1:8,11:18:24.08:369,24,0	1/1:16,3:18:14.80:230,15,0	1/1:13,10:23:11.10:184,11,0	1/1:14,0:14:2.68:20,3,0	0/0:19,0:38:20.97:0,21,196	0/1:14,18:34:99:742,0,123	1/1:17,13:30:33.11:507,33,0	1/1:3,9:13:24.08:369,24,0
chr10	7643773	.	AC	A	2872.40	PASS	AB=0.519;AC=7;AF=0.125;AN=56;BaseQRankSum=10.430;DP=569;FS=5.857;HRun=1;HaplotypeScore=52.6666;InbreedingCoeff=0.8385;MQ=78.28;MQ0=0;MQRankSum=-1.764;QD=37.30;ReadPosRankSum=2.616;VQSLOD=4.0527;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:81.28:0,81,1294	0/0:4,0:4:12.04:0,12,192	0/0:16,0:16:48.14:0,48,722	0/0:14,0:14:39.13:0,39,608	0/0:25,0:25:75.24:0,75,1174	0/0:17,0:17:48.15:0,48,743	0/0:20,0:20:60.16:0,60,926	0/0:23,0:23:66.18:0,66,968	0/0:24,0:24:69.22:0,69,1080	0/0:18,0:18:54.18:0,54,864	0/0:28,0:28:84.27:0,84,1316	0/0:19,0:19:57.18:0,57,886	0/0:25,0:25:75.26:0,75,1195	0/0:17,0:17:51.17:0,51,812	0/0:19,0:19:57.19:0,57,911	0/0:18,0:18:54.18:0,54,846	0/0:24,0:24:72.10:0,72,1070	0/0:25,0:25:75.26:0,75,1195	0/0:14,0:14:37.67:0,38,600	0/0:30,0:30:90.29:0,90,1415	1/1:0,15:15:45.15:629,45,0	0/0:17,0:17:48.16:0,48,765	0/0:17,0:17:51.17:0,51,815	0/0:24,0:24:72.25:0,72,1146	0/0:26,0:26:78.27:0,78,1247	0/1:2,26:28:11.67:1007,0,12	1/1:0,27:27:78.26:1091,78,0	1/1:0,7:7:21.07:294,21,0
chr10	7644681	.	T	TCTCTGTGG	42484.73	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-8.666;DP=635;FS=2.248;HRun=0;HaplotypeScore=148.0200;InbreedingCoeff=0.9949;MQ=81.94;MQ0=0;MQRankSum=-18.705;QD=101.64;ReadPosRankSum=0.336;VQSLOD=5.8927;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,15:22:54.18:2191,54,0	0/0:4,0:4:12.04:0,12,336	0/0:22,0:22:57.50:0,58,1636	0/0:27,0:27:69.07:0,69,1908	1/1:7,26:34:69.24:2991,69,0	0/0:31,0:31:93.31:0,93,2433	0/0:19,0:19:51.16:0,51,1366	1/1:10,18:29:78.27:3247,78,0	0/0:22,0:22:66.23:0,66,1815	1/1:8,19:29:81.28:3205,81,0	1/1:9,16:28:60.21:2594,60,0	1/1:4,22:29:78.27:3187,78,0	1/1:5,17:23:63.22:2488,63,0	1/1:9,12:22:54.10:1992,54,0	1/1:8,10:19:54.14:2152,54,0	1/1:6,13:19:54.19:2255,54,0	0/0:19,0:19:54.19:0,54,1509	1/1:2,8:12:30.10:1290,30,0	0/0:26,0:26:78.26:0,78,2041	0/0:29,0:29:81.26:0,81,2175	1/1:8,6:15:24.08:1024,24,0	1/1:3,18:26:60.21:2620,60,0	1/1:7,17:26:60.21:2618,60,0	1/1:8,8:18:27.09:1172,27,0	0/0:18,0:18:48.16:0,48,1305	1/1:3,12:15:45.15:1798,45,0	1/1:7,28:38:99:4195,99,0	1/1:6,8:14:36.12:1464,36,0
chr10	7645952	.	AAGGAACAAAGACTCTTCTTT	A	23555.56	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=15.440;DP=473;FS=2.158;HRun=0;HaplotypeScore=277.0523;InbreedingCoeff=0.9676;MQ=68.93;MQ0=1;MQRankSum=-14.183;QD=116.61;ReadPosRankSum=2.546;VQSLOD=4.5720;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,4:9:12.04:572,12,0	0/0:4,0:4:12.04:0,12,1168	0/0:11,0:11:28.34:0,28,1123	0/0:14,0:14:34.56:0,35,1362	1/1:5,20:25:63.22:3413,63,0	0/0:31,0:31:93.31:0,93,7688	0/0:15,0:15:45.15:0,45,4067	1/1:11,12:23:36.07:1086,36,0	0/0:22,0:22:66.23:0,66,5738	1/1:3,11:14:33.11:1888,33,0	1/1:6,14:20:45.15:2450,45,0	1/1:3,16:19:48.16:2746,48,0	1/1:4,8:12:24.08:1373,24,0	1/1:1,17:18:48.16:2746,48,0	1/1:3,5:7:18.06:933,18,0	1/1:4,10:14:33.11:1792,33,0	0/0:19,0:19:57.20:0,57,5085	1/1:4,2:6:9.03:393,9,0	0/0:13,0:13:33.11:0,33,2523	0/0:23,0:23:69.24:0,69,6086	0/0:22,0:22:66.23:0,66,6246	1/1:2,10:12:30.10:1716,30,0	1/1:4,14:18:39.13:2230,39,0	1/1:3,1:4:6.02:218,6,0	0/0:34,0:34:99:0,102,9086	0/0:20,0:20:60.21:0,60,5512	0/0:33,0:33:99:0,99,8937	0/0:10,0:10:30.10:0,30,2671
chr10	7646029	.	GTTTT	G	7828.52	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=16.055;DP=537;FS=3.684;HRun=15;HaplotypeScore=175.0881;InbreedingCoeff=0.9738;MQ=69.50;MQ0=3;MQRankSum=-16.388;QD=30.82;ReadPosRankSum=5.700;VQSLOD=2.0650;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,11:13:32.98:450,33,0	0/0:7,0:7:18.06:0,18,417	0/0:32,0:20:31.81:0,32,607	0/0:19,0:12:18.06:0,18,329	1/1:7,19:28:57.81:777,58,0	0/0:15,0:18:45.15:0,45,998	0/0:10,0:11:33:0,33,623	1/1:16,21:38:63.67:861,64,0	0/0:18,0:23:60.19:0,60,1263	1/1:2,9:11:26.85:366,27,0	1/1:2,16:18:47.97:653,48,0	1/1:6,21:27:59.81:817,60,0	1/1:5,21:26:62.85:858,63,0	1/1:6,11:17:32.66:449,33,0	1/1:0,14:14:42.14:572,42,0	1/1:2,15:17:42.03:572,42,0	0/0:21,0:21:57.18:0,57,1229	1/1:1,2:3:5.94:82,6,0	0/0:22,0:24:66.14:0,66,1401	0/0:14,0:19:48.11:0,48,1020	0/0:14,0:18:42.12:0,42,849	1/1:1,17:19:54.11:718,54,0	1/1:4,11:15:29.88:409,30,0	1/1:2,6:8:17.98:245,18,0	0/0:23,0:26:66.21:0,66,1357	0/0:25,1:31:49.35:0,49,1749	0/0:27,0:29:75.26:0,75,1627	0/0:3,0:3:9.03:0,9,207
chr10	7647278	.	CACACACAT	C	3912.51	PASS	AB=0.998;AC=33;AF=0.589;AN=56;BaseQRankSum=-0.876;DP=557;FS=0.000;HRun=0;HaplotypeScore=136.0332;InbreedingCoeff=-0.2664;MQ=64.33;MQ0=25;MQRankSum=0.896;QD=8.05;ReadPosRankSum=0.826;VQSLOD=2.3950;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:27:5.92:39,6,0	0/1:5,0:5:8.96:9,0,283	0/0:24,0:17:40.81:0,41,386	0/0:34,0:22:52.15:0,52,534	0/1:17,0:17:90.67:91,0,148	0/1:21,0:20:35.29:336,0,35	0/1:26,0:26:5.88:6,0,82	0/1:18,0:16:51.89:215,0,52	0/0:13,0:11:6.02:0,6,116	0/1:16,0:14:99:101,0,322	1/1:6,0:6:12:105,12,0	1/1:1,14:14:2.04:87,2,0	0/1:22,0:23:0.52:72,0,1	1/1:14,0:14:31.40:254,31,0	0/1:29,0:29:99:236,0,353	0/1:27,0:27:99:259,0,310	0/1:27,0:26:99:176,0,386	0/1:14,0:13:72.35:72,0,106	1/1:10,0:9:26.84:206,27,0	0/1:13,0:13:99:120,0,160	0/1:41,0:38:99:395,0,368	1/1:14,0:14:23.58:190,24,0	1/1:17,0:16:31.30:269,31,0	1/1:27,0:27:5.84:39,6,0	0/1:30,0:30:99:155,0,901	0/1:24,0:23:99:232,0,449	0/1:19,0:18:99:190,0,107	0/1:5,0:5:44.75:61,0,45
chr10	7647280	.	CACACAT	C	4570.58	PASS	AB=0.997;AC=36;AF=0.643;AN=56;BaseQRankSum=-1.446;DP=546;FS=0.422;HRun=0;HaplotypeScore=119.0733;InbreedingCoeff=-0.1513;MQ=67.41;MQ0=25;MQRankSum=-1.038;QD=9.68;ReadPosRankSum=1.358;VQSLOD=3.2811;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:25:5.92:39,6,0	0/1:5,0:5:8.96:9,0,210	0/0:26,0:19:46.81:0,47,438	0/0:35,0:23:55.09:0,55,552	0/1:16,0:16:79.70:91,0,80	1/1:21,0:20:32.56:371,33,0	0/1:24,1:25:38.73:48,0,39	1/1:14,0:12:32.87:260,33,0	0/0:13,0:11:6.01:0,6,66	0/1:18,0:16:99:147,0,174	1/1:6,0:6:12:105,12,0	1/1:15,0:14:2.04:55,2,0	1/1:22,0:22:10.15:70,10,0	1/1:13,0:13:32.89:276,33,0	0/1:27,0:27:99:335,0,170	0/1:26,0:26:99:265,0,136	0/1:26,0:25:99:202,0,196	0/1:13,0:12:74.72:91,0,75	1/1:12,0:11:32.85:260,33,0	0/1:13,0:13:99:120,0,109	0/1:39,0:36:99:423,0,160	1/1:13,1:14:26.63:248,27,0	1/1:15,0:14:34.05:293,34,0	1/1:2,25:27:2.84:14,3,0	0/1:31,0:31:99:202,0,579	0/1:24,0:23:99:309,0,243	0/1:19,0:18:12.88:278,0,13	0/1:5,0:5:22.21:61,0,22
chr10	7647282	.	CACAT	C	5309.94	PASS	AB=0.995;AC=44;AF=0.786;AN=56;BaseQRankSum=-0.473;DP=542;FS=0.977;HRun=0;HaplotypeScore=105.6252;InbreedingCoeff=0.0131;MQ=68.87;MQ0=22;MQRankSum=-2.746;QD=11.06;ReadPosRankSum=2.928;VQSLOD=3.7442;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,26:26:5.92:39,6,0	0/1:6,0:6:34.08:34,0,114	0/0:26,0:19:46.81:0,47,438	0/0:36,0:24:55.09:0,55,552	1/1:15,0:15:17.77:117,18,0	1/1:19,0:19:50.09:397,50,0	1/1:24,0:24:2.55:25,3,0	1/1:15,0:13:35.87:284,36,0	1/1:12,0:10:3.28:21,3,0	0/1:19,0:17:46.95:229,0,47	1/1:6,0:6:12:105,12,0	1/1:15,0:14:2.45:42,2,0	1/1:2,20:22:1.38:60,1,0	1/1:14,0:14:35.78:300,36,0	0/1:25,0:25:63.72:370,0,64	0/1:25,0:25:19.23:345,0,19	0/1:25,1:25:69.21:330,0,69	1/1:14,0:13:8.65:136,9,0	1/1:12,0:11:32.85:260,33,0	0/1:14,0:14:20.01:151,0,20	1/1:37,0:35:0.46:457,0,0	1/1:13,0:13:26.63:218,27,0	1/1:17,0:16:40.93:347,41,0	1/1:27,0:27:2.84:14,3,0	0/1:29,0:29:99:230,0,325	0/1:24,0:24:86.83:330,0,87	1/1:17,1:17:46.08:397,46,0	1/1:5,0:5:8.98:73,9,0
chr10	7647284	.	CAT	C	6349.93	PASS	AB=1.000;AC=50;AF=0.893;AN=56;BaseQRankSum=2.409;DP=517;FS=4.297;HRun=0;HaplotypeScore=85.1607;InbreedingCoeff=0.4330;MQ=72.95;MQ0=15;MQRankSum=-3.603;QD=14.08;ReadPosRankSum=3.046;VQSLOD=4.0828;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:26:5.92:39,6,0	0/1:5,0:5:38.06:60,0,38	0/0:28,0:21:52.80:0,53,484	0/0:38,0:26:58.09:0,58,578	1/1:0,13:13:17.78:117,18,0	1/1:17,0:17:50.88:437,51,0	1/1:2,24:26:4.42:54,4,0	1/1:1,15:15:38.86:308,39,0	1/1:3,7:9:5.79:64,6,0	1/1:15,1:15:24.03:317,24,0	1/1:6,0:6:12:105,12,0	1/1:15,0:14:2.96:28,3,0	1/1:20,0:20:5.53:34,6,0	1/1:14,0:14:38.91:329,39,0	1/1:25,0:25:67.43:545,67,0	1/1:20,0:20:50.16:410,50,0	1/1:24,0:24:10.53:322,11,0	1/1:16,0:15:41.26:321,41,0	1/1:12,0:12:35.84:286,36,0	1/1:11,0:11:26.68:226,27,0	1/1:33,0:31:73.75:609,74,0	1/1:14,0:14:29.34:243,29,0	1/1:16,0:16:41.78:349,42,0	1/1:27,0:27:2.78:14,3,0	0/1:26,0:26:64.43:309,0,64	1/1:22,0:22:22.67:361,23,0	1/1:17,0:16:47.83:388,48,0	1/1:4,0:4:8.98:73,9,0
chr10	7647951	.	TACACACACACAC	T	4626.53	PASS	AC=24;AF=0.444;AN=54;BaseQRankSum=-2.103;DP=465;FS=24.350;HRun=0;HaplotypeScore=157.4509;InbreedingCoeff=0.7958;MQ=46.46;MQ0=8;MQRankSum=-3.583;QD=25.01;ReadPosRankSum=-0.495;VQSLOD=2.4130;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:8,0:10:3.01:44,3,0	0/0:12,0:13:18.06:0,18,678	0/0:22,0:14:18.40:0,18,148	0/0:34,0:15:21.06:0,21,380	1/1:12,13:25:33.03:830,33,0	0/0:15,0:17:11.85:0,12,545	0/0:6,0:15:9:0,9,332	1/1:15,17:31:50.96:759,51,0	0/0:12,0:16:21.51:0,22,697	1/1:18,7:23:47.96:1053,48,0	1/1:10,5:15:15.03:370,15,0	./.	1/1:9,4:13:9.03:317,9,0	1/1:7,10:17:3.01:106,3,0	1/1:0,4:4:3.01:105,3,0	1/1:6,5:11:15.05:529,15,0	0/0:16,0:16:18.06:0,18,760	0/0:6,4:10:3.01:0,3,83	0/0:7,0:5:9.02:0,9,243	0/0:12,0:23:9.37:0,9,217	0/0:9,0:19:33.07:0,33,715	1/1:1,5:6:3.01:106,3,0	1/1:3,9:11:6.02:196,6,0	1/1:3,10:13:6.02:212,6,0	0/0:12,0:32:28.81:0,29,1277	0/0:6,0:16:42.06:0,42,902	0/0:11,0:17:26.86:0,27,460	0/0:4,0:14:27.09:0,27,623
chr10	7648048	.	ATCTC	A	2816.93	PASS	AB=0.922;AC=21;AF=0.389;AN=54;BaseQRankSum=4.438;DP=474;FS=1.038;HRun=0;HaplotypeScore=194.5310;InbreedingCoeff=0.1284;MQ=53.50;MQ0=6;MQRankSum=-3.746;QD=11.18;ReadPosRankSum=-0.239;VQSLOD=2.7575;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	0/1:7,0:7:18.40:18,0,79	0/0:23,0:14:32.90:0,33,476	0/0:20,0:12:18.93:0,19,275	1/1:8,17:25:5.67:113,6,0	0/1:21,0:21:18.64:19,0,298	0/1:13,0:13:36.90:37,0,68	1/1:11,25:32:8.93:987,9,0	0/1:17,0:17:41.09:41,0,200	0/1:10,11:21:67.25:797,0,67	1/1:3,20:23:15.28:278,15,0	0/1:5,1:6:7.80:8,0,14	0/0:11,0:11:6.65:0,7,96	0/1:15,0:14:1.05:1,0,67	1/1:4,7:11:8.79:164,9,0	1/1:2,10:12:7.98:319,8,0	0/0:17,0:16:3.37:0,3,214	0/1:2,3:5:99:155,0,104	0/1:15,0:12:8.32:8,0,251	0/1:18,0:18:35.66:36,0,321	0/0:29,0:29:38.64:0,39,624	0/0:12,0:11:1.96:0,2,7	0/0:6,0:6:8.69:0,9,75	0/1:7,0:7:0:0,0,0	0/0:18,0:18:16.95:0,17,330	0/0:28,0:26:72.20:0,72,1583	0/0:30,0:28:59.80:0,60,1306	0/0:23,0:22:58.96:0,59,1249
chr10	7648080	.	ATCTC	A	2558.93	PASS	AB=0.976;AC=34;AF=0.630;AN=54;BaseQRankSum=-1.433;DP=495;FS=4.321;HRun=0;HaplotypeScore=194.5618;InbreedingCoeff=0.1856;MQ=35.64;MQ0=24;MQRankSum=1.948;QD=7.66;ReadPosRankSum=-1.466;VQSLOD=2.6751;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	1/1:11,1:12:11.85:185,12,0	0/0:40,0:2:2.80:0,3,13	0/0:40,0:5:5.79:0,6,41	1/1:24,2:26:2.67:34,3,0	1/1:18,4:22:19.89:262,20,0	1/1:14,0:14:20.91:232,21,0	0/1:34,0:28:22.10:93,0,22	1/1:17,1:18:11.75:280,12,0	0/1:14,1:14:87.61:155,0,88	1/1:15,4:19:15.27:165,15,0	0/0:6,0:4:2.04:0,2,6	0/1:13,0:12:22.01:22,0,33	1/1:14,0:12:1.03:23,1,0	1/1:11,4:15:9.25:101,9,0	1/1:10,4:14:14.89:185,15,0	1/1:12,0:13:5.97:119,6,0	0/1:6,0:6:28.76:57,0,29	0/1:10,1:7:42.54:163,0,43	0/1:20,1:21:99:245,0,192	0/0:17,0:17:8.48:0,8,71	1/1:7,0:6:3:25,3,0	1/1:5,0:5:2.98:22,3,0	0/1:5,0:5:0:0,0,0	1/1:19,4:23:18.02:211,18,0	0/1:27,0:25:99:145,0,584	0/0:31,0:28:38.11:0,38,446	0/0:22,0:22:11.45:0,11,512
chr10	7648094	.	CTA	C	617.11	PASS	AB=0.990;AC=14;AF=0.280;AN=50;BaseQRankSum=-4.118;DP=491;FS=5.584;HRun=0;HaplotypeScore=197.8843;InbreedingCoeff=0.1718;MQ=37.47;MQ0=21;MQRankSum=3.174;QD=2.91;ReadPosRankSum=-3.603;VQSLOD=1.7189;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/1:13,0:13:28.31:122,0,28	0/0:40,0:4:1.45:0,1,3	0/1:49,1:6:11.94:12,0,16	0/0:24,0:24:2.78:0,3,16	0/1:23,0:23:56.94:77,0,57	1/1:13,0:13:14.90:112,15,0	0/0:35,0:29:64.57:0,65,966	0/1:20,1:21:0.98:147,0,1	0/0:12,0:11:29.16:0,29,461	0/0:15,0:15:14.63:0,15,90	0/0:6,0:4:4.69:0,5,20	0/0:10,0:9:6.77:0,7,37	1/1:11,0:9:2.80:13,3,0	0/0:14,0:14:8.70:0,9,58	0/0:14,0:14:20.68:0,21,165	0/1:11,0:11:23.08:53,0,23	0/0:6,0:6:8.17:0,8,157	0/1:14,0:10:54.47:54,0,136	0/1:26,0:26:83.26:83,0,279	0/0:11,0:11:3.01:0,3,39	0/1:4,0:4:0.04:0,0,0	./.	./.	1/1:23,2:25:8.03:87,8,0	0/0:31,0:28:69.36:0,69,1074	0/0:34,0:31:27.94:0,28,502	0/0:19,0:19:52.08:0,52,776
chr10	7648098	.	CTA	C	972.91	PASS	AB=0.963;AC=28;AF=0.538;AN=52;BaseQRankSum=0.772;DP=500;FS=1.269;HRun=0;HaplotypeScore=197.2752;InbreedingCoeff=0.2238;MQ=38.49;MQ0=23;MQRankSum=-0.098;QD=3.67;ReadPosRankSum=-2.999;VQSLOD=2.2727;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:7,0:4:0:0,0,0	0/1:12,1:13:3.15:118,0,3	0/0:45,0:6:5.25:0,5,70	0/0:61,0:9:3.04:0,3,34	1/1:22,0:22:2.68:17,3,0	0/1:19,5:24:9.52:70,0,10	1/1:11,0:11:8.99:75,9,0	0/0:30,0:25:46.61:0,47,445	0/1:22,0:22:0.97:148,0,1	0/1:12,0:11:45.04:45,0,270	1/1:12,0:12:13.57:78,14,0	1/1:6,0:4:0.47:1,0,0	1/1:9,0:8:5.93:50,6,0	1/1:12,0:10:2.73:17,3,0	1/1:14,0:14:7.33:45,7,0	1/1:14,0:14:13.57:81,14,0	0/1:11,0:11:1.33:69,0,1	0/1:6,0:6:27.15:27,0,128	0/1:12,2:11:82.02:113,0,82	0/1:26,0:26:64.46:64,0,279	0/0:11,0:11:0:0,0,1	0/1:4,0:4:0.04:0,0,0	./.	./.	1/1:23,3:26:8.36:106,8,0	0/0:34,0:31:27.58:0,28,581	0/0:32,0:29:26.28:0,26,231	0/0:19,0:19:36.07:0,36,251
chr10	7648100	.	A	ATC	903.90	PASS	AB=0.971;AC=24;AF=0.462;AN=52;BaseQRankSum=0.241;DP=502;FS=11.521;HRun=0;HaplotypeScore=194.7439;InbreedingCoeff=0.0665;MQ=39.97;MQ0=23;MQRankSum=-1.146;QD=3.12;ReadPosRankSum=0.788;VQSLOD=1.5010;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:6,0:4:0.47:1,0,0	1/1:8,4:12:15.01:181,15,0	0/0:49,0:6:8.94:0,9,79	0/0:62,0:10:3.95:0,4,58	0/1:21,0:21:0.05:0,0,0	1/1:19,5:24:5.58:96,6,0	./.	0/0:26,0:22:15.04:0,15,177	0/1:18,4:22:18.10:27,0,18	0/1:12,0:11:32.53:33,0,143	0/1:11,0:11:0.05:0,0,1	0/0:3,0:4:0:0,0,0	0/0:4,0:7:2.84:0,3,9	1/1:6,0:9:2.18:14,2,0	0/0:14,0:14:0.37:0,0,2	0/1:13,0:13:0:0,0,0	0/1:11,1:13:1.44:84,0,1	0/1:6,0:6:8.68:9,0,64	0/1:12,2:11:17.63:155,0,18	0/0:26,0:26:15.02:0,15,173	1/1:9,0:10:1.36:16,1,0	0/0:3,0:4:0:0,0,0	./.	0/1:1,0:1:0:0,0,0	1/1:21,7:28:7.30:47,7,0	0/1:35,0:32:80.20:217,0,80	0/1:32,0:29:51.45:51,0,57	0/1:18,0:18:56.28:100,0,56
chr10	7648102	.	C	CTA	1240.69	PASS	AB=0.965;AC=26;AF=0.481;AN=54;BaseQRankSum=1.389;DP=506;FS=5.940;HRun=0;HaplotypeScore=187.9176;InbreedingCoeff=0.0660;MQ=39.67;MQ0=23;MQRankSum=-3.517;QD=4.66;ReadPosRankSum=0.904;VQSLOD=2.6800;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:7,0:4:0.47:1,0,0	0/1:13,0:13:29.39:62,0,29	0/0:51,0:6:9.40:0,9,100	0/0:69,0:11:3.17:0,3,90	1/1:20,0:20:2.49:17,2,0	0/1:24,0:24:37.39:43,0,37	0/0:11,0:11:8.98:0,9,73	0/0:23,0:19:9.19:0,9,123	0/0:22,0:22:5.59:0,6,137	0/1:12,0:11:42.83:143,0,43	1/1:11,0:11:13.97:80,14,0	1/1:6,0:4:2.93:18,3,0	0/1:8,0:7:0.45:11,0,0	1/1:10,0:8:2.13:31,2,0	1/1:14,0:14:8.06:47,8,0	1/1:12,1:13:17.41:98,17,0	0/1:12,0:13:22.49:22,0,71	0/0:6,0:6:0.64:0,1,32	0/1:15,0:12:46.69:47,0,86	0/0:26,0:26:32.47:0,32,369	0/1:8,1:9:0:1,0,0	0/1:4,0:4:0.07:0,0,0	./.	0/1:1,0:1:0:0,0,0	0/0:28,0:28:8.14:0,8,52	0/1:32,3:32:99:301,0,182	0/1:26,7:30:63.47:165,0,63	0/1:18,0:18:39.63:302,0,40
chr10	7648104	.	C	CTCTA	2042.01	PASS	AB=0.982;AC=23;AF=0.426;AN=54;BaseQRankSum=1.236;DP=503;FS=11.465;HRun=0;HaplotypeScore=185.9676;InbreedingCoeff=0.4821;MQ=41.28;MQ0=21;MQRankSum=-3.563;QD=9.63;ReadPosRankSum=0.783;VQSLOD=2.3678;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:4:0:0,0,0	0/0:13,0:13:2.87:0,3,28	0/0:54,0:8:2.13:0,2,99	0/0:74,0:12:9.68:0,10,104	1/1:19,0:19:3.87:20,4,0	0/1:24,0:24:7.83:8,0,39	0/0:11,0:11:6.46:0,6,49	0/0:19,0:15:16:0,16,76	0/0:21,0:21:6.44:0,6,91	0/1:12,0:11:22.13:22,0,135	1/1:9,0:9:6.76:37,7,0	1/1:6,0:4:2.92:17,3,0	0/0:8,0:7:5.49:0,5,34	1/1:7,0:6:2.99:32,3,0	1/1:14,0:14:6.83:39,7,0	1/1:13,0:13:13.89:76,14,0	0/0:13,0:13:10.20:0,10,58	0/1:6,0:6:3.86:78,0,4	0/0:15,0:12:12.81:0,13,132	0/0:25,0:25:29.95:0,30,359	0/1:9,1:10:0.02:0,0,0	0/1:3,0:3:0.01:0,0,0	./.	0/0:1,0:1:0:0,0,0	0/0:28,0:28:9.68:0,10,88	1/1:32,5:34:81.51:1074,82,0	1/1:31,2:30:13.14:239,13,0	1/1:17,2:19:50.59:566,51,0
chr10	7648110	.	C	CAA	199.42	PASS	AB=0.955;AC=25;AF=0.463;AN=54;BaseQRankSum=5.112;DP=497;FS=9.574;HRun=0;HaplotypeScore=181.1752;InbreedingCoeff=0.2562;MQ=48.15;MQ0=13;MQRankSum=-2.684;QD=0.77;ReadPosRankSum=-2.120;VQSLOD=1.3278;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,0:5:0.47:1,0,0	0/0:12,0:12:6.90:0,7,69	0/0:59,0:14:15.75:0,16,193	0/1:75,0:16:3.78:4,0,134	1/1:13,2:14:0.89:3,1,0	0/1:24,0:24:0.76:1,0,36	0/0:9,0:9:2.75:0,3,46	0/0:12,0:10:27.04:0,27,345	0/0:20,0:20:10.22:0,10,103	0/1:11,1:11:57.60:58,0,271	1/1:5,4:9:9.20:33,9,0	1/1:6,0:4:2.75:14,3,0	1/1:7,0:7:2.84:9,3,0	1/1:8,0:7:1.94:14,2,0	1/1:10,4:13:7.98:34,8,0	0/1:9,4:11:19.61:38,0,20	0/0:12,0:12:10.41:0,10,117	0/0:6,0:6:14.72:0,15,115	0/0:16,0:13:13.06:0,13,223	0/0:28,0:28:28.70:0,29,446	1/1:10,0:10:0.47:1,0,0	1/1:3,0:3:0.72:2,1,0	./.	0/1:2,0:2:0:0,0,0	0/0:29,0:29:11.29:0,11,130	0/0:34,0:31:2.27:0,2,796	0/1:32,0:29:54.27:54,0,192	0/1:19,0:19:75.98:76,0,223
chr10	7648114	.	C	CTA	1238.19	PASS	AB=0.884;AC=30;AF=0.556;AN=54;BaseQRankSum=0.138;DP=499;FS=13.049;HRun=0;HaplotypeScore=177.6927;InbreedingCoeff=0.0756;MQ=54.22;MQ0=11;MQRankSum=-0.720;QD=3.86;ReadPosRankSum=-1.520;VQSLOD=2.0169;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:7,0:4:0.47:1,0,0	1/1:8,5:13:14.84:186,15,0	0/0:56,0:16:13.95:0,14,149	0/0:79,0:19:7.31:0,7,122	0/1:12,0:15:0.04:0,0,0	0/1:11,14:24:4.55:44,0,5	1/1:8,0:8:3.47:26,3,0	0/0:6,0:5:15.05:0,15,223	0/1:10,11:21:7.95:41,0,8	0/1:10,0:12:99:144,0,184	0/1:7,0:10:0.16:0,0,0	0/0:5,0:4:1.55:0,2,4	1/1:7,0:7:5.17:20,5,0	1/1:10,0:8:2:17,2,0	0/1:12,0:14:0.78:1,0,1	1/1:13,0:12:5.66:38,6,0	1/1:10,2:12:8.88:164,9,0	0/1:5,0:6:7.01:7,0,45	0/1:15,0:13:29.40:119,0,29	0/0:28,0:28:3.27:0,3,237	0/1:10,0:10:0:1,0,0	0/1:2,0:2:0.03:0,0,0	./.	0/1:3,0:3:0:0,0,0	1/1:25,6:31:2.20:68,2,0	0/1:32,0:29:99:170,0,242	0/1:31,0:28:99:109,0,109	0/1:19,0:19:99:216,0,124
chr10	7648118	.	C	CTA	1062.73	PASS	AB=0.996;AC=33;AF=0.611;AN=54;BaseQRankSum=-0.296;DP=495;FS=1.357;HRun=0;HaplotypeScore=179.1739;InbreedingCoeff=0.0801;MQ=56.78;MQ0=7;MQRankSum=-3.303;QD=3.05;ReadPosRankSum=-1.799;VQSLOD=2.2345;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:8,0:5:2.03:5,2,0	1/1:11,1:12:15:194,15,0	0/0:52,0:18:10.09:0,10,144	0/0:72,0:19:24.33:0,24,155	0/0:14,0:13:0:0,0,0	1/1:26,0:25:11.73:98,12,0	1/1:8,0:8:3.47:26,3,0	0/0:6,0:5:14.53:0,15,83	0/1:19,1:20:3.13:66,0,3	0/1:14,0:13:87.88:157,0,88	0/1:8,0:8:0.09:0,0,0	1/1:9,0:7:2.65:19,3,0	1/1:7,0:6:5.30:25,5,0	1/1:11,0:8:2.51:31,3,0	0/1:15,0:14:0.77:1,0,1	1/1:15,0:13:4.81:17,5,0	0/1:12,0:12:24.61:148,0,25	0/1:7,0:7:5.30:5,0,65	0/1:15,0:13:27.66:124,0,28	0/1:29,0:29:1.42:1,0,192	0/1:10,0:10:0:1,0,0	1/1:6,0:6:3.01:36,3,0	./.	0/1:3,0:3:0:0,0,0	1/1:28,3:31:13.84:127,14,0	0/1:35,0:32:90.87:91,0,198	0/1:32,0:29:13.01:13,0,102	0/1:16,0:16:18.79:19,0,83
chr10	7648120	.	CTA	C	227.52	PASS	AB=0.974;AC=18;AF=0.333;AN=54;BaseQRankSum=1.549;DP=497;FS=7.765;HRun=0;HaplotypeScore=179.1460;InbreedingCoeff=-0.0035;MQ=56.83;MQ0=5;MQRankSum=-1.357;QD=0.78;ReadPosRankSum=-3.364;VQSLOD=0.8652;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:8,0:5:0:0,0,0	0/1:12,0:12:23.91:24,0,67	0/0:53,0:20:12.45:0,12,251	0/1:71,0:20:12.64:13,0,90	0/0:14,0:13:0:0,0,0	0/0:25,1:25:14.16:0,14,123	0/0:3,5:8:2.76:0,3,47	0/0:9,0:8:20.98:0,21,275	0/0:21,0:21:4.91:0,5,99	0/0:14,0:13:34.80:0,35,415	0/0:8,0:8:0:0,0,1	0/1:9,0:7:0.08:0,0,0	1/1:5,0:4:5.96:49,6,0	1/1:11,0:8:2.30:15,2,0	0/1:15,0:14:0.08:0,0,2	0/0:15,0:13:2.72:0,3,19	0/1:12,0:12:10.26:10,0,139	0/1:7,0:7:3.54:4,0,126	0/1:12,0:13:15.17:15,0,162	0/0:27,1:28:20.27:0,20,333	0/1:10,0:10:0.01:0,0,0	0/0:6,0:6:0:0,0,0	./.	0/1:3,0:3:0:1,0,0	0/1:31,0:31:10.25:10,0,62	0/1:35,2:34:30.54:31,0,710	0/1:29,4:30:43.58:44,0,168	0/1:12,4:16:99:138,0,252
chr10	7648126	.	A	ATCTC	2701.67	PASS	AB=0.938;AC=31;AF=0.574;AN=54;BaseQRankSum=-0.907;DP=507;FS=1.441;HRun=0;HaplotypeScore=181.3537;InbreedingCoeff=0.4056;MQ=58.92;MQ0=5;MQRankSum=-0.591;QD=7.17;ReadPosRankSum=2.779;VQSLOD=2.8551;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:5:0.45:0,0,1	1/1:13,1:14:17.62:218,18,0	0/0:52,0:22:19.28:0,19,325	0/1:73,0:22:6.25:6,0,94	0/1:16,0:15:0.29:0,0,1	1/1:27,0:26:17.10:191,17,0	1/1:7,0:7:6:76,6,0	0/0:11,0:10:23.94:0,24,150	1/1:23,1:24:17.54:205,18,0	0/0:15,0:14:24.61:0,25,226	0/0:8,0:8:0:0,0,1	1/1:9,0:7:0.47:1,0,0	0/0:5,0:4:5.74:0,6,38	1/1:12,0:9:0.41:1,0,0	0/0:15,0:14:0:0,0,3	0/0:14,0:12:2.23:0,2,9	1/1:13,0:13:12.16:308,12,0	0/1:6,0:6:14.07:17,0,14	1/1:16,0:16:23.38:204,23,0	0/1:13,15:28:43.27:43,0,61	0/1:10,0:10:0.01:0,0,0	0/1:6,0:6:0:0,0,0	./.	1/1:3,0:3:0.24:0,0,0	0/1:29,3:32:1.97:195,0,2	1/1:32,2:31:80.51:986,81,0	1/1:28,3:28:0.46:124,0,0	1/1:16,0:16:30.08:270,30,0
chr10	7648136	.	CTA	C	61.29	PASS	AB=0.942;AC=12;AF=0.231;AN=52;BaseQRankSum=2.528;DP=508;FS=12.770;HRun=0;HaplotypeScore=178.5445;InbreedingCoeff=0.2339;MQ=64.61;MQ0=4;MQRankSum=-1.853;QD=0.34;ReadPosRankSum=-1.755;VQSLOD=1.8132;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:9,0:7:0.07:1,0,0	0/0:16,0:16:22.90:0,23,357	0/0:58,0:28:38.88:0,39,732	0/1:69,1:27:22.11:22,0,149	0/0:19,0:17:0:0,0,1	0/0:29,1:29:29.10:0,29,459	0/0:9,0:9:14.65:0,15,210	0/1:9,0:8:2.57:3,0,47	0/0:26,0:26:23.19:0,23,437	0/0:18,0:17:18.83:0,19,401	0/0:7,0:7:0:0,0,1	0/1:8,3:8:0:0,0,0	1/1:1,2:2:1.55:4,2,0	0/1:7,3:6:0.19:0,0,0	0/1:12,0:11:0.06:0,0,2	0/0:12,0:10:0.74:0,1,18	0/1:15,0:15:46.93:47,0,442	0/0:7,0:7:5.78:0,6,28	0/0:15,0:15:39.09:0,39,598	0/0:28,0:28:25.45:0,25,269	0/1:6,1:7:0:0,0,0	./.	./.	0/1:3,0:3:0:1,0,0	0/0:30,0:30:14.40:0,14,289	0/1:32,0:29:82.28:82,0,169	0/0:28,2:27:11.72:0,12,67	0/0:15,0:15:7.40:0,7,107
chr10	7648138	.	A	ATC	1739.01	PASS	AB=1.000;AC=26;AF=0.464;AN=56;BaseQRankSum=3.504;DP=501;FS=1.261;HRun=0;HaplotypeScore=170.8257;InbreedingCoeff=0.2146;MQ=65.16;MQ0=3;MQRankSum=-2.528;QD=5.66;ReadPosRankSum=3.998;VQSLOD=2.9278;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:9,0:7:0.18:1,0,0	0/1:16,0:16:16.35:16,0,171	0/0:56,0:28:33.90:0,34,592	0/1:65,0:28:39.75:40,0,120	0/0:17,0:15:0:0,0,1	0/0:31,0:30:8.44:0,8,320	0/0:9,0:9:14.64:0,15,175	0/0:6,0:5:14.87:0,15,109	0/0:26,0:26:10.12:0,10,250	0/1:18,0:18:34.54:139,0,35	0/0:8,0:8:0:0,0,1	1/1:11,0:8:0.47:1,0,0	1/1:3,0:2:2.99:23,3,0	0/0:12,0:8:0:0,0,1	0/1:10,0:9:0.02:0,0,1	1/1:11,0:9:4.50:25,5,0	0/1:13,0:15:27.59:28,0,173	1/1:4,1:5:2.94:37,3,0	0/1:15,0:15:36.06:36,0,351	0/1:29,0:29:99:159,0,192	0/1:7,0:7:0:0,0,0	0/1:6,0:6:0:0,0,0	0/1:3,0:3:0:0,0,0	0/1:1,0:3:0:0,0,0	0/0:28,0:28:13.08:0,13,162	1/1:16,17:30:62.72:913,63,0	1/1:17,11:27:4.61:167,5,0	1/1:9,6:15:14.76:294,15,0
chr10	7648140	.	C	CAA	611.27	PASS	AB=0.907;AC=20;AF=0.357;AN=56;BaseQRankSum=5.657;DP=517;FS=0.659;HRun=0;HaplotypeScore=180.8267;InbreedingCoeff=0.3502;MQ=69.06;MQ0=3;MQRankSum=-3.296;QD=2.45;ReadPosRankSum=0.457;VQSLOD=2.3542;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:4,5:8:3.41:8,3,0	0/0:16,0:16:23.56:0,24,338	0/0:57,0:30:53.01:0,53,786	0/1:68,0:31:37.47:37,0,159	0/1:12,8:16:0:1,0,0	0/0:29,0:28:33.92:0,34,511	0/0:11,0:11:19.43:0,19,276	0/0:6,0:5:15.03:0,15,180	0/0:26,0:26:22.55:0,23,368	0/1:17,7:20:99:478,0,197	0/1:6,2:8:0:1,0,0	1/1:8,1:7:2.69:13,3,0	1/1:3,1:3:3.01:61,3,0	0/1:11,1:8:0.25:0,0,0	0/1:6,5:9:0:2,0,0	1/1:5,7:10:11.41:119,11,0	0/0:15,0:15:10.75:0,11,451	0/0:4,0:5:6.85:0,7,37	0/0:16,0:16:39.01:0,39,566	0/0:29,0:29:28.75:0,29,350	0/1:7,0:7:0:0,0,0	0/1:7,0:7:0:0,0,0	0/1:3,0:3:0:0,0,0	0/1:4,0:4:0:0,0,0	0/0:28,0:28:14.28:0,14,250	0/1:29,0:30:17.87:18,0,196	0/0:23,0:27:1.88:0,2,51	0/1:12,0:15:5.20:5,0,15
chr10	7648142	.	CTA	C	316.16	PASS	AB=0.912;AC=18;AF=0.321;AN=56;BaseQRankSum=1.501;DP=517;FS=0.669;HRun=0;HaplotypeScore=180.8215;InbreedingCoeff=0.1762;MQ=69.17;MQ0=4;MQRankSum=-0.226;QD=1.29;ReadPosRankSum=-3.449;VQSLOD=1.3721;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:10,0:8:0.53:1,0,1	0/0:15,0:15:3.93:0,4,271	0/0:52,2:31:8:0,8,771	0/1:67,1:30:26.11:26,0,181	0/0:19,0:15:0:0,0,1	0/0:25,4:28:20.48:0,20,517	0/0:11,0:11:23.68:0,24,385	0/0:6,0:6:14.98:0,15,159	0/0:24,1:25:21.97:0,22,367	0/0:22,1:19:1.34:0,1,254	0/0:9,0:9:0:0,0,1	1/1:6,3:6:0.47:1,0,0	1/1:4,0:3:2.01:6,2,0	0/1:9,5:10:0.19:0,0,1	0/1:11,0:9:0.04:0,0,1	0/0:13,0:11:0.96:0,1,20	0/1:15,0:15:19.35:19,0,437	1/1:5,0:5:4.27:45,4,0	0/0:16,0:16:2.07:0,2,557	0/1:28,0:28:99:137,0,281	1/1:7,2:9:2.99:24,3,0	0/1:4,4:7:0:0,0,0	0/0:3,1:4:0:0,0,0	0/1:4,1:5:0.07:1,0,0	0/0:28,1:29:17.40:0,17,312	0/1:28,3:29:32.50:167,0,33	0/1:28,0:27:7.68:9,0,8	0/0:13,2:15:8.10:0,8,26
chr10	7648144	.	A	ATC	1442.95	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=0.257;DP=516;FS=3.861;HRun=0;HaplotypeScore=180.2159;InbreedingCoeff=0.3955;MQ=72.06;MQ0=4;MQRankSum=-1.902;QD=5.27;ReadPosRankSum=2.587;VQSLOD=3.2429;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:10,0:8:0.42:0,0,1	0/1:15,0:15:5.51:6,0,200	0/0:53,0:32:45.29:0,45,587	0/1:67,0:32:27.33:27,0,165	0/0:18,0:14:0:0,0,1	0/0:31,0:30:31.83:0,32,467	0/0:12,0:12:23.69:0,24,347	0/0:7,0:7:15.05:0,15,214	0/0:25,0:25:8.84:0,9,258	0/0:21,0:17:41.80:0,42,326	0/0:9,0:9:0:0,0,1	0/1:9,0:6:0:0,0,0	0/0:5,0:4:3.63:0,4,14	0/1:17,0:13:0.25:0,0,0	0/1:9,0:7:0.01:0,0,1	0/0:12,0:10:3.31:0,3,15	0/0:14,0:14:37.28:0,37,426	0/0:5,0:5:4.07:0,4,23	0/1:16,0:16:0.47:0,0,438	0/1:29,0:29:22.85:23,0,255	1/1:9,0:9:3.01:48,3,0	0/1:8,0:7:0:0,0,0	0/1:10,0:10:0.04:0,0,0	0/1:6,0:6:0.05:0,0,0	0/0:28,0:28:17.29:0,17,253	1/1:12,17:27:70.71:924,71,0	1/1:14,11:24:10.68:236,11,0	1/1:9,6:15:21.07:315,21,0
chr10	7648154	.	CAATCTCTCTA	C	275.50	PASS	AB=1.000;AC=10;AF=0.179;AN=56;BaseQRankSum=2.060;DP=511;FS=5.716;HRun=0;HaplotypeScore=204.3107;InbreedingCoeff=0.3321;MQ=67.96;MQ0=4;MQRankSum=-2.507;QD=2.24;ReadPosRankSum=-1.442;VQSLOD=2.2660;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:12:7.69:0,8,28	0/0:14,0:14:25.11:0,25,836	0/0:50,0:32:60.20:0,60,1216	0/1:41,0:24:7.88:8,0,230	0/0:17,0:13:0.94:0,1,2	0/0:31,0:30:55.47:0,55,1980	0/0:14,0:14:30.57:0,31,1257	0/1:7,0:7:18.35:86,0,18	0/0:27,0:27:32.18:0,32,1219	0/1:18,0:15:46.38:253,0,46	0/0:7,5:12:0:0,0,1	0/0:15,0:11:3.81:0,4,36	0/0:10,0:8:6.39:0,6,79	1/1:20,0:16:0.68:3,1,0	0/0:10,0:8:0:0,0,1	0/0:12,0:10:6.41:0,6,35	0/0:16,0:17:39.86:0,40,1332	1/1:4,0:5:4.25:32,4,0	0/0:17,0:16:45.15:0,45,1516	0/0:27,0:27:23.51:0,24,902	0/0:8,0:9:9.01:0,9,343	1/1:15,0:12:0.76:1,1,0	0/1:17,0:16:0.26:0,0,1	0/0:7,0:6:0:0,0,0	0/0:27,0:27:24.04:0,24,1077	0/0:25,0:24:41.18:0,41,1561	0/0:21,0:21:17.27:0,17,415	0/0:10,0:10:24.05:0,24,440
chr10	7648162	.	CTA	C	36.43	PASS	AB=0.969;AC=10;AF=0.179;AN=56;BaseQRankSum=2.410;DP=567;FS=2.659;HRun=0;HaplotypeScore=194.0546;InbreedingCoeff=0.3804;MQ=59.06;MQ0=9;MQRankSum=-0.538;QD=0.18;ReadPosRankSum=-0.671;VQSLOD=2.9414;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:13:0.67:0,1,3	0/0:13,0:13:27.04:0,27,486	0/0:44,0:22:43.47:0,43,700	0/1:41,0:20:2.74:3,0,176	0/1:16,4:16:0.27:0,0,1	0/0:33,0:32:43.39:0,43,917	0/0:15,0:14:30.07:0,30,578	0/0:9,0:9:26.71:0,27,317	0/0:27,0:27:32.90:0,33,561	0/1:21,2:19:74.79:97,0,75	0/1:14,0:14:0.27:0,0,1	0/0:20,0:14:3.22:0,3,13	0/1:16,0:11:0.92:1,0,5	0/1:24,0:19:0.47:1,0,0	0/0:10,0:8:0:0,0,1	0/0:9,2:9:1.39:0,1,3	0/0:18,0:18:44.81:0,45,746	0/0:4,0:4:0.84:0,1,2	0/0:15,0:14:39.13:0,39,752	0/0:26,0:26:26.94:0,27,488	0/0:11,0:11:9.03:0,9,167	0/1:29,0:26:1.02:1,0,1	1/1:31,0:27:2.34:24,2,0	0/1:10,0:9:0.15:0,0,0	0/0:24,0:24:38.80:0,39,580	0/0:27,0:26:71.97:0,72,1126	0/0:24,0:24:19.24:0,19,315	0/0:10,0:10:24.01:0,24,388
chr10	7648164	.	A	ATC	464.37	PASS	AB=0.905;AC=10;AF=0.179;AN=56;BaseQRankSum=2.778;DP=576;FS=0.000;HRun=0;HaplotypeScore=196.5576;InbreedingCoeff=0.3524;MQ=56.78;MQ0=10;MQRankSum=-1.785;QD=2.21;ReadPosRankSum=0.657;VQSLOD=1.8440;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:14:2.33:0,2,27	0/0:13,0:13:27.04:0,27,352	0/0:44,0:21:35.98:0,36,494	0/1:42,0:19:6.13:6,0,67	0/1:12,9:17:0.26:0,0,1	0/0:32,0:31:48.80:0,49,698	0/0:15,0:14:30.06:0,30,410	0/0:9,0:9:18.05:0,18,217	0/0:27,0:27:29.98:0,30,414	0/1:13,12:21:55.60:499,0,56	0/1:11,2:13:0.20:0,0,0	0/0:20,0:14:2.93:0,3,28	0/0:17,0:12:7.88:0,8,48	0/1:24,0:19:0.08:0,0,1	0/0:1,9:8:0:0,0,1	1/1:4,8:10:1.92:50,2,0	0/0:18,0:18:41.61:0,42,507	0/0:4,0:4:1.50:0,2,4	0/0:15,0:14:42.11:0,42,543	0/0:28,0:28:27.03:0,27,372	0/0:11,0:11:8.98:0,9,120	0/1:31,0:28:0.17:0,0,2	0/1:32,0:28:0.50:0,0,1	0/1:10,0:9:0.03:0,0,0	0/0:24,0:24:39:0,39,524	0/0:26,0:25:69.18:0,69,889	0/0:24,0:24:19.39:0,19,242	0/0:10,0:10:20.24:0,20,229
chr10	7648184	.	ATCTC	A	291.29	PASS	AB=0.977;AC=10;AF=0.185;AN=54;BaseQRankSum=4.736;DP=685;FS=6.974;HRun=0;HaplotypeScore=229.2941;InbreedingCoeff=0.3332;MQ=48.10;MQ0=14;MQRankSum=-5.446;QD=1.72;ReadPosRankSum=-4.283;VQSLOD=1.1640;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:16:2.34:0,2,16	0/0:11,0:11:26.82:0,27,411	0/0:48,0:16:5.89:0,6,347	0/0:58,0:16:17.79:0,18,152	0/0:26,1:23:1.73:0,2,46	0/0:35,0:34:71.82:0,72,926	0/0:16,0:15:30.27:0,30,355	0/1:24,0:22:99:153,0,448	0/0:31,0:31:50.03:0,50,625	0/1:36,4:35:99:195,0,939	0/0:27,1:28:4.62:0,5,120	0/0:21,0:17:3.48:0,3,36	0/0:16,0:12:5.99:0,6,29	1/1:25,0:21:2.86:20,3,0	0/1:15,0:12:0:1,0,0	1/1:16,1:15:7.40:35,7,0	0/0:19,1:20:30.44:0,30,501	./.	0/0:19,0:17:47.81:0,48,693	0/0:29,0:29:59.36:0,59,733	0/0:13,0:13:8.55:0,9,242	0/1:35,0:32:0.03:2,0,0	0/0:39,0:35:2.32:0,2,49	1/1:13,0:12:0.29:1,0,0	0/0:28,0:28:47.26:0,47,862	0/0:26,0:25:65.90:0,66,1213	0/0:19,0:19:14.61:0,15,273	0/0:6,0:6:14.98:0,15,321
chr10	7648206	.	CTA	C	918.56	PASS	AB=0.993;AC=24;AF=0.429;AN=56;BaseQRankSum=1.201;DP=747;FS=3.514;HRun=0;HaplotypeScore=237.0161;InbreedingCoeff=0.0758;MQ=43.48;MQ0=20;MQRankSum=0.496;QD=1.95;ReadPosRankSum=-3.083;VQSLOD=2.3290;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:17:19.10:19,0,52	0/1:11,0:11:3.22:3,0,37	0/0:29,0:5:11.93:0,12,189	0/0:57,0:11:8.59:0,9,201	0/0:34,0:31:13.68:0,14,106	0/1:38,0:37:16.14:16,0,92	1/1:16,0:15:5.08:56,5,0	0/1:34,0:27:13.69:14,0,988	0/1:33,0:33:3.74:4,0,56	0/1:49,0:42:99:272,0,630	0/0:31,1:31:5.41:0,5,116	0/1:25,0:21:16.84:113,0,17	0/1:20,1:17:97.85:98,0,112	1/1:27,3:26:12.78:116,13,0	1/1:16,0:14:2.09:17,2,0	1/1:20,0:20:2.78:14,3,0	0/0:21,0:21:14:0,14,114	1/1:7,0:7:8.73:55,9,0	0/1:21,0:21:28.16:58,0,28	0/1:33,0:33:4.83:5,0,88	0/0:13,0:13:11.06:0,11,179	1/1:37,2:36:16.62:151,17,0	0/1:42,2:40:26.17:75,0,26	0/1:11,0:10:0.19:0,0,0	0/0:34,0:34:3.87:0,4,53	0/0:27,0:26:57.41:0,57,600	0/0:25,0:25:10.87:0,11,140	0/0:5,0:5:11.93:0,12,168
chr10	7648208	.	ATC	A	2275.20	PASS	AB=0.885;AC=29;AF=0.518;AN=56;BaseQRankSum=2.736;DP=744;FS=0.482;HRun=0;HaplotypeScore=232.5189;InbreedingCoeff=-0.1499;MQ=43.48;MQ0=20;MQRankSum=0.640;QD=3.89;ReadPosRankSum=-3.978;VQSLOD=2.2193;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:21,1:17:36.07:36,0,39	0/1:11,0:11:0.09:0,0,23	0/0:29,0:5:12.02:0,12,159	0/0:56,0:11:11.04:0,11,137	0/0:36,1:34:16.42:0,16,105	0/1:38,0:37:43.58:44,0,66	1/1:15,0:14:1.31:63,1,0	0/1:30,4:27:95.81:96,0,835	0/1:31,0:31:3.30:3,0,20	0/1:22,26:41:99:774,0,516	0/0:22,10:31:5.23:0,5,100	0/1:15,10:21:3.38:238,0,3	0/1:10,12:18:78:178,0,78	1/1:15,15:26:14.98:177,15,0	1/1:10,6:14:2.98:43,3,0	1/1:19,1:20:1.47:4,1,0	0/1:19,2:21:35.37:35,0,39	1/1:1,6:7:9.03:119,9,0	0/1:20,0:20:43.11:43,0,73	0/1:31,0:31:64.56:70,0,65	0/1:12,0:13:3.63:4,0,124	1/1:23,16:37:23.88:314,24,0	0/1:20,23:40:5.75:143,0,6	0/1:4,7:10:0.08:0,0,0	0/1:31,0:31:11.05:11,0,25	0/1:28,0:27:31.63:32,0,246	0/1:27,0:27:3.47:3,0,81	0/0:5,0:5:8.07:0,8,104
chr10	7648210	.	CTCTATCTA	C	1438.30	PASS	AB=1.000;AC=10;AF=0.185;AN=54;BaseQRankSum=-5.509;DP=762;FS=7.557;HRun=0;HaplotypeScore=278.2731;InbreedingCoeff=0.6022;MQ=44.14;MQ0=20;MQRankSum=-1.677;QD=11.99;ReadPosRankSum=-0.064;VQSLOD=1.4107;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:19:5.05:0,5,49	0/0:11,0:11:17.98:0,18,464	./.	0/0:56,0:11:0:0,0,0	0/0:21,0:40:18.97:0,19,184	0/0:37,0:37:46.31:0,46,1264	0/0:16,0:15:9.49:0,9,186	0/0:33,0:25:14.88:0,15,214	0/0:32,0:32:48.01:0,48,1021	0/0:44,0:41:47.59:0,48,871	0/0:26,0:32:4.56:0,5,116	0/0:25,0:23:29.19:0,29,223	0/1:17,0:18:3.17:3,0,49	0/0:27,0:27:14.83:0,15,126	0/0:14,0:14:5.85:0,6,58	0/1:10,0:24:0.22:1,0,0	0/0:21,0:21:42.05:0,42,758	0/0:7,0:7:7.38:0,7,40	0/0:21,0:21:26.79:0,27,467	0/0:31,0:31:48.04:0,48,1487	1/1:13,1:14:6.02:130,6,0	0/0:36,0:37:16.94:0,17,87	0/0:38,0:40:11.42:0,11,63	0/0:12,0:11:2.95:0,3,43	0/0:31,0:31:37.14:0,37,1158	1/1:8,21:28:57.16:1212,57,0	1/1:7,19:26:6:151,6,0	1/1:4,1:5:3.01:75,3,0
chr10	7648212	.	CTA	C	771.26	PASS	AB=0.996;AC=15;AF=0.268;AN=56;BaseQRankSum=7.647;DP=765;FS=1.625;HRun=0;HaplotypeScore=240.1052;InbreedingCoeff=-0.0142;MQ=44.32;MQ0=21;MQRankSum=-6.722;QD=2.07;ReadPosRankSum=0.549;VQSLOD=2.1062;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:20:13.11:13,0,79	0/0:11,0:11:29.87:0,30,261	0/0:27,0:5:9.91:0,10,112	0/0:54,0:11:8.24:0,8,115	0/0:43,0:40:24.19:0,24,141	0/0:38,0:38:91.68:0,92,815	0/0:15,0:14:9.01:0,9,163	0/1:34,0:26:15.11:15,0,771	0/0:32,0:32:62.82:0,63,538	0/1:51,0:44:99:273,0,571	0/0:33,1:33:11.40:0,11,148	0/1:27,0:23:61.13:107,0,61	0/1:22,0:18:97.84:98,0,114	0/1:29,0:26:8.58:98,0,9	0/1:16,0:14:12.02:12,0,18	0/1:25,0:25:13.27:13,0,19	0/0:21,0:21:38.34:0,38,431	1/1:7,0:7:8.69:53,9,0	0/0:22,0:21:42.70:0,43,439	0/0:31,0:31:62.78:0,63,705	0/0:15,0:15:8.72:0,9,132	1/1:38,2:37:19.06:165,19,0	0/1:42,2:40:27.11:76,0,27	0/0:11,1:11:2.82:0,3,25	0/0:31,0:31:53.79:0,54,491	0/1:27,0:26:5.77:6,0,223	0/1:26,0:26:0.17:0,0,72	0/0:5,0:5:3.16:0,3,59
chr10	7648268	.	AC	A	4148.11	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=6.332;DP=741;FS=43.911;HRun=2;HaplotypeScore=148.4463;InbreedingCoeff=0.9997;MQ=60.85;MQ0=3;MQRankSum=-3.454;QD=30.73;ReadPosRankSum=1.145;VQSLOD=0.0456;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:30:63.16:0,63,898	0/0:14,0:14:39.11:0,39,545	0/0:35,0:30:90.24:0,90,1288	0/0:20,0:16:43.43:0,43,600	0/0:33,0:33:72.13:0,72,1049	0/0:31,0:31:93.24:0,93,1325	0/0:15,0:15:45.15:0,45,674	0/0:38,0:38:99:0,114,1695	0/0:35,0:35:99:0,105,1560	0/0:43,0:40:99:0,117,1720	0/0:27,0:26:75.24:0,75,1070	1/1:1,31:30:72.23:930,72,0	1/1:0,24:23:63.19:797,63,0	1/1:0,22:21:42.13:536,42,0	0/0:34,0:33:90.30:0,90,1346	0/0:33,0:32:59.84:0,60,875	0/0:23,0:23:66.20:0,66,963	0/0:21,0:21:48.16:0,48,713	0/0:18,0:18:51.17:0,51,759	0/0:39,0:39:99:0,117,1749	0/0:19,0:19:51.16:0,51,744	1/1:1,19:20:54.17:696,54,0	1/1:0,24:24:63.20:813,63,0	1/1:1,12:12:30.09:377,30,0	0/0:29,0:29:84.28:0,84,1228	0/0:29,0:28:81.27:0,81,1191	0/0:28,0:28:51.17:0,51,757	0/0:10,0:10:27.09:0,27,405
chr10	7649014	.	TA	T	5078.84	PASS	AB=0.833;AC=29;AF=0.518;AN=56;BaseQRankSum=9.149;DP=424;FS=10.231;HRun=10;HaplotypeScore=43.5781;InbreedingCoeff=0.8766;MQ=61.66;MQ0=1;MQRankSum=1.661;QD=21.34;ReadPosRankSum=1.980;VQSLOD=5.2967;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,32:32:89.98:781,90,0	0/0:5,0:5:9.02:0,9,100	0/0:10,1:5:9:0,9,89	0/0:12,1:8:17.16:0,17,159	1/1:0,31:31:89.98:780,90,0	0/0:8,0:8:21.06:0,21,232	0/0:10,0:10:21.06:0,21,232	1/1:6,19:25:50.97:442,51,0	0/0:22,0:22:57.15:0,57,628	1/1:2,14:16:41.99:365,42,0	1/1:1,15:16:44.99:390,45,0	1/1:0,8:8:24:208,24,0	1/1:0,13:13:35.99:313,36,0	1/1:1,13:14:38.99:339,39,0	1/1:0,9:9:21:182,21,0	1/1:0,13:13:38.99:339,39,0	0/0:17,1:19:27.90:0,28,509	1/1:0,9:9:20.99:182,21,0	0/1:12,3:14:35.30:35,0,293	0/0:23,0:23:60.16:0,60,664	0/0:18,1:19:25.06:0,25,495	1/1:1,12:13:32.99:286,33,0	1/1:2,13:15:2.65:253,3,0	1/1:1,8:9:20.99:182,21,0	0/0:13,0:13:36.10:0,36,398	0/0:14,1:15:16.06:0,16,405	0/0:22,1:23:43.13:0,43,703	0/0:4,0:4:12.03:0,12,132
chr10	7650734	.	G	GCA	3082.04	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=0.122;DP=520;FS=2.311;HRun=0;HaplotypeScore=114.1155;InbreedingCoeff=0.8168;MQ=69.39;MQ0=19;MQRankSum=-4.398;QD=13.76;ReadPosRankSum=-0.511;VQSLOD=3.6519;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:17,2:19:15.05:251,15,0	0/0:5,0:5:11.98:0,12,129	0/0:36,0:19:33.10:0,33,413	0/0:49,0:28:51.11:0,51,617	1/1:5,10:15:11.88:194,12,0	0/0:19,0:19:47.99:0,48,492	0/0:30,0:29:49.36:0,49,651	1/1:5,10:15:32.83:423,33,0	0/0:11,0:11:8.98:0,9,94	1/1:5,11:16:6.88:568,7,0	1/1:3,10:13:15:209,15,0	1/1:16,5:20:18.95:259,19,0	1/1:4,4:8:12.04:200,12,0	1/1:19,2:21:22.99:328,23,0	1/1:5,15:20:12.04:197,12,0	1/1:4,16:19:3.01:50,3,0	0/0:22,0:21:30.06:0,30,309	1/1:5,7:10:6.52:198,7,0	0/0:22,0:21:50.70:0,51,517	0/0:16,0:16:39.12:0,39,481	0/0:31,1:32:9.69:0,10,626	1/1:12,4:14:15.05:231,15,0	1/1:3,1:3:5.69:61,6,0	1/1:11,1:12:8.62:111,9,0	0/0:18,0:18:37.44:0,37,378	0/0:19,0:19:45.02:0,45,522	0/0:17,0:15:41.21:0,41,447	0/1:12,0:12:18.43:18,0,189
chr10	7650743	.	CACT	C	170.58	PASS	AB=0.939;AC=9;AF=0.161;AN=56;BaseQRankSum=2.833;DP=546;FS=1.045;HRun=0;HaplotypeScore=131.0820;InbreedingCoeff=0.1922;MQ=54.89;MQ0=24;MQRankSum=-1.279;QD=1.27;ReadPosRankSum=-3.222;VQSLOD=1.2324;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:14,3:16:36.92:37,0,46	0/0:5,0:5:15.03:0,15,212	0/0:30,0:13:33.11:0,33,512	0/0:41,0:19:57.16:0,57,805	0/0:16,0:16:10.64:0,11,96	0/0:18,0:18:48.16:0,48,767	0/0:32,0:31:54.90:0,55,1062	0/1:18,0:16:27.01:27,0,321	0/0:6,0:6:9.03:0,9,136	0/0:15,0:15:13.04:0,13,297	0/0:12,0:12:18.83:0,19,181	1/1:28,1:28:3.64:87,4,0	1/1:7,3:10:5.29:84,5,0	0/1:22,2:24:24.58:45,0,25	0/0:19,0:19:11.98:0,12,110	0/0:19,0:18:3.01:0,3,41	0/0:23,0:22:36.12:0,36,610	0/1:12,0:10:19.38:19,0,135	0/0:24,0:22:27.42:0,27,1007	0/0:20,0:20:42.90:0,43,721	0/0:38,0:38:69:0,69,1109	0/1:22,2:20:2.82:3,0,8	0/0:10,0:8:3:0,3,29	0/0:15,1:16:4.27:0,4,40	0/0:17,0:17:45.15:0,45,760	0/0:22,0:22:66.01:0,66,1100	0/0:19,0:16:50.89:0,51,891	0/0:10,0:10:23.81:0,24,449
chr10	7650780	.	C	CAG	2145.58	PASS	AB=0.934;AC=18;AF=0.321;AN=56;BaseQRankSum=2.698;DP=578;FS=2.061;HRun=0;HaplotypeScore=157.2456;InbreedingCoeff=-0.2705;MQ=54.51;MQ0=10;MQRankSum=1.128;QD=6.01;ReadPosRankSum=4.081;VQSLOD=3.3892;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:8.74:0,9,65	0/1:7,0:7:15.84:16,0,80	0/0:24,0:8:11.93:0,12,146	0/0:31,0:21:48.83:0,49,496	0/1:25,0:25:30.02:48,0,30	0/1:20,0:20:99:140,0,150	0/1:29,0:29:99:156,0,353	0/0:20,0:19:45.01:0,45,317	0/0:15,0:14:13.10:0,13,225	0/1:13,0:13:34.34:34,0,167	0/1:14,0:14:31.64:47,0,32	0/0:31,0:30:11.75:0,12,79	0/1:12,0:12:5.43:5,0,34	0/0:17,0:17:4.89:0,5,48	0/1:19,0:19:26.88:64,0,27	0/0:10,0:10:0.78:0,1,15	0/1:31,0:31:99:102,0,241	0/0:10,0:9:18.80:0,19,113	0/1:36,0:33:9.42:9,0,473	0/1:16,0:16:29.07:29,0,242	0/1:11,28:38:19.30:297,0,19	0/0:25,0:21:0.40:0,0,1	0/0:13,0:12:2.99:0,3,24	0/1:18,0:18:1.78:2,0,32	0/1:20,0:19:15.11:15,0,311	1/1:6,16:22:36.10:559,36,0	0/1:16,5:18:16.84:469,0,17	0/1:3,12:15:0.23:305,0,0
chr10	7650814	.	C	CCTAA	11657.88	PASS	AB=0.623;AC=24;AF=0.429;AN=56;BaseQRankSum=14.635;DP=512;FS=5.366;HRun=0;HaplotypeScore=153.2778;InbreedingCoeff=0.7627;MQ=78.30;MQ0=0;MQRankSum=-17.167;QD=50.47;ReadPosRankSum=0.023;VQSLOD=5.4216;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,13:15:42.14:947,42,0	0/0:10,0:10:30.10:0,30,629	0/0:18,0:18:52.09:0,52,947	0/0:23,0:23:64.24:0,64,1130	1/1:5,21:26:26.56:1385,27,0	0/0:22,0:22:60.16:0,60,1113	0/0:31,0:31:93.31:0,93,1912	1/1:11,13:25:54.68:1226,55,0	0/0:21,0:21:57.20:0,57,1181	0/1:5,13:18:0.06:876,0,0	0/1:6,14:20:3.76:859,0,4	1/1:3,11:14:36.12:787,36,0	1/1:6,9:15:14.78:761,15,0	1/1:5,6:11:30.10:687,30,0	1/1:9,13:22:28.28:1173,28,0	1/1:8,13:21:8.99:1057,9,0	0/0:27,0:27:57.18:0,57,1122	0/1:2,3:5:5.76:179,0,6	0/0:21,0:21:63.22:0,63,1259	0/0:19,0:19:57.20:0,57,1192	0/0:30,0:30:48.14:0,48,886	1/1:2,6:8:17.78:479,18,0	0/1:8,6:14:35.92:576,0,36	1/1:5,12:17:12.15:663,12,0	0/0:16,0:16:45.15:0,45,944	0/0:15,0:15:43.03:0,43,835	0/0:18,0:18:47.77:0,48,943	0/0:10,0:10:12.01:0,12,203
chr10	7650816	.	C	CTT	7316.81	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=12.925;DP=515;FS=23.283;HRun=1;HaplotypeScore=139.3557;InbreedingCoeff=0.9131;MQ=78.00;MQ0=0;MQRankSum=-15.600;QD=28.58;ReadPosRankSum=-3.070;VQSLOD=2.5107;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,13:17:42.06:523,42,0	0/0:10,0:10:30.10:0,30,459	0/0:17,0:17:26.19:0,26,534	0/0:24,0:24:33.75:0,34,733	1/1:7,21:28:71.48:916,71,0	0/0:20,0:20:54.13:0,54,759	0/0:31,0:31:93.30:0,93,1398	1/1:11,13:24:36.39:600,36,0	0/0:22,0:22:63.17:0,63,896	1/1:6,13:19:50.68:610,51,0	1/1:5,14:19:56.02:610,56,0	1/1:3,11:14:36.04:452,36,0	1/1:6,9:15:44.96:505,45,0	1/1:4,6:11:33.02:393,33,0	1/1:10,13:23:69.02:801,69,0	1/1:9,13:22:60.01:691,60,0	0/0:24,0:24:54.15:0,54,781	1/1:2,3:5:11.97:126,12,0	0/0:22,0:22:57.17:0,57,830	0/0:20,0:20:60.19:0,60,897	0/0:29,0:29:15.35:0,15,177	1/1:2,6:8:24.03:293,24,0	1/1:8,6:14:38.93:403,39,0	1/1:5,12:17:32.04:344,32,0	0/0:16,0:16:45.15:0,45,688	0/0:15,0:15:39.68:0,40,198	0/1:20,0:20:48.16:48,0,164	0/0:9,0:9:8.77:0,9,57
chr10	7653141	.	G	GT	6202.03	PASS	AB=0.725;AC=26;AF=0.464;AN=56;BaseQRankSum=-1.920;DP=633;FS=2.218;HRun=9;HaplotypeScore=72.2559;InbreedingCoeff=0.8506;MQ=79.07;MQ0=1;MQRankSum=-0.905;QD=18.62;ReadPosRankSum=-0.589;VQSLOD=5.0141;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,1:22:26.80:0,27,461	0/0:14,0:14:35.99:0,36,313	0/0:15,0:15:19.52:0,20,160	0/0:15,0:16:11.86:0,12,156	1/1:5,31:37:99:1044,99,0	0/0:34,3:37:41.59:0,42,815	0/0:21,0:21:53.95:0,54,464	1/1:9,21:30:40.07:648,40,0	0/0:17,0:17:41.97:0,42,361	1/1:3,28:31:84.19:910,84,0	1/1:3,29:32:84.15:902,84,0	1/1:3,0:18:39.77:199,40,0	1/1:4,1:23:42.57:212,43,0	1/1:3,1:26:52.04:287,52,0	0/1:5,15:20:20.98:444,0,21	1/1:5,11:16:39.09:416,39,0	0/0:29,1:30:41.79:0,42,592	1/1:0,10:11:29.91:313,30,0	0/0:13,0:13:32.98:0,33,284	0/0:33,1:34:50.76:0,51,666	0/0:20,0:20:44.96:0,45,390	1/1:2,1:22:54.43:300,54,0	1/1:1,0:26:68.18:341,68,0	1/1:2,1:11:22.89:133,23,0	0/0:26,0:25:65.95:0,66,573	0/1:24,4:29:54.11:54,0,407	0/0:28,0:28:71.97:0,72,625	0/0:7,0:7:21:0,21,182
chr10	7653534	.	TTCTACATCTTCA	T	11344.06	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=15.499;DP=796;FS=3.411;HRun=0;HaplotypeScore=261.7069;InbreedingCoeff=0.9984;MQ=53.72;MQ0=15;MQRankSum=-15.574;QD=82.80;ReadPosRankSum=3.358;VQSLOD=4.3662;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,157,9324	0/0:7,0:7:21.07:0,21,1182	0/0:34,0:17:33.11:0,33,1649	0/0:30,0:14:39.13:0,39,1937	0/0:17,0:17:51.16:0,51,2714	0/0:32,0:32:96.33:0,96,5398	0/0:23,0:23:66.23:0,66,3969	0/0:36,0:35:99:0,99,5764	0/0:26,0:26:78.27:0,78,4621	0/0:39,0:39:99:0,114,6834	0/0:41,0:41:99:0,117,6937	1/1:1,29:30:77.78:2933,78,0	1/1:3,24:27:66.23:2482,66,0	1/1:4,14:18:36.12:1354,36,0	0/0:24,0:24:72.25:0,72,4416	0/0:28,0:28:75.26:0,75,4362	0/0:27,0:27:78.27:0,78,4716	0/0:20,0:20:55.39:0,55,3110	0/0:28,0:25:72.23:0,72,3854	0/0:31,0:31:93.31:0,93,5518	0/0:47,0:47:99:0,138,8038	1/1:2,25:27:69.23:2362,69,0	1/1:1,16:17:36.12:1311,36,0	1/1:6,12:18:24.08:902,24,0	0/0:24,0:24:69.24:0,69,4134	0/0:35,0:35:99:0,102,6041	0/0:46,0:43:99:0,132,7475	0/0:9,0:9:27.07:0,27,1356
chr10	7655808	.	CGCT	C	7286.16	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=13.002;DP=689;FS=0.706;HRun=0;HaplotypeScore=103.3051;InbreedingCoeff=0.9970;MQ=71.56;MQ0=0;MQRankSum=-3.836;QD=38.76;ReadPosRankSum=4.696;VQSLOD=5.8807;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,51:52:99:1897,114,0	0/0:12,0:12:36.11:0,36,770	0/0:34,0:34:86.06:0,86,1535	0/0:29,0:29:66.35:0,66,1417	0/0:25,0:24:63.22:0,63,1382	0/0:25,0:25:66.23:0,66,1464	0/0:26,0:26:78.25:0,78,1702	0/0:28,0:28:81.28:0,81,1759	0/0:23,0:23:66.23:0,66,1475	0/0:24,0:24:66.22:0,66,1414	0/0:20,0:20:60.21:0,60,1357	1/1:1,24:25:69.02:1081,69,0	1/1:0,18:19:45.11:718,45,0	1/1:0,23:23:54.18:898,54,0	0/0:25,0:25:72.25:0,72,1585	0/0:26,0:26:78.27:0,78,1747	0/0:27,0:27:81.22:0,81,1629	0/0:17,0:17:45.13:0,45,931	0/0:20,0:20:60.16:0,60,1132	0/0:16,0:16:48.16:0,48,1039	0/0:42,0:42:99:0,120,2600	1/1:2,23:25:57.19:947,57,0	1/1:0,12:12:33.11:548,33,0	1/1:1,31:32:72.25:1198,72,0	0/0:20,0:20:45.15:0,45,1015	0/0:30,0:30:87.29:0,87,1851	0/0:27,0:27:75.24:0,75,1633	0/0:5,0:5:15.05:0,15,320
chr10	7656021	.	CA	C	550.38	PASS	AB=0.820;AC=13;AF=0.232;AN=56;BaseQRankSum=9.059;DP=645;FS=2.118;HRun=1;HaplotypeScore=118.8582;InbreedingCoeff=-0.2928;MQ=51.30;MQ0=46;MQRankSum=-2.292;QD=1.87;ReadPosRankSum=3.290;VQSLOD=-0.5591;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:30,1:27:42.19:42,0,114	0/1:8,2:8:26.36:26,0,65	0/0:41,0:19:57.15:0,57,686	0/0:43,0:20:54.48:0,54,640	0/0:21,0:19:24.05:0,24,324	0/1:19,3:18:50.84:51,0,63	0/1:32,11:38:81.30:81,0,168	0/0:21,0:19:55.06:0,55,705	0/1:13,6:17:21.87:82,0,22	0/0:17,0:13:34.87:0,35,431	0/0:12,0:12:18.05:0,18,234	0/1:12,9:21:69.79:71,0,70	0/1:10,7:15:20.18:66,0,20	0/1:12,3:13:24.65:25,0,51	0/0:15,0:15:15.04:0,15,172	0/0:22,0:22:26.95:0,27,351	0/1:26,11:34:99:117,0,150	0/0:19,0:15:27.93:0,28,338	0/1:13,1:11:37.93:38,0,75	0/0:16,2:17:30.85:0,31,160	0/0:41,0:34:51.16:0,51,678	0/0:14,5:18:13.21:0,13,99	0/1:13,2:13:2.29:2,0,28	0/1:19,8:25:52.94:59,0,53	0/1:19,5:22:37.25:40,0,37	0/0:26,0:23:62.66:0,63,684	0/0:27,0:25:56.94:0,57,655	0/0:8,0:6:12.03:0,12,143
chr10	7656128	.	GCAGA	G	1373.79	PASS	AB=0.757;AC=10;AF=0.227;AN=44;BaseQRankSum=5.574;DP=384;FS=22.915;HRun=0;HaplotypeScore=49.4670;InbreedingCoeff=0.1275;MQ=31.24;MQ0=116;MQRankSum=-0.060;QD=9.96;ReadPosRankSum=3.905;VQSLOD=0.1530;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:8:8.98:0,9,144	0/0:5,0:5:15.05:0,15,397	./.	./.	./.	0/0:23,0:12:15:0,15,340	0/0:32,0:12:32.98:0,33,781	0/0:5,0:4:11.86:0,12,85	0/0:24,0:20:23.66:0,24,564	0/0:4,0:1:2.88:0,3,15	./.	0/1:7,8:10:99:204,0,108	0/1:6,12:14:60.94:287,0,61	1/1:4,20:20:24.08:461,24,0	0/1:8,0:8:2.35:2,0,6	0/0:7,0:7:2.64:0,3,42	0/0:18,0:11:12:0,12,258	0/0:5,0:3:9:0,9,120	0/1:11,0:6:7.97:8,0,179	0/0:6,0:6:15.05:0,15,379	./.	1/1:1,8:8:6.02:115,6,0	0/1:3,11:12:30.27:30,0,36	0/1:23,11:24:44.51:397,0,45	0/0:11,0:6:15.04:0,15,348	0/0:6,0:2:5.96:0,6,45	./.	0/0:2,0:1:2.98:0,3,21
chr10	7656131	.	G	GAC	153.77	PASS	AB=0.937;AC=10;AF=0.263;AN=38;BaseQRankSum=-0.714;DP=385;FS=5.773;HRun=0;HaplotypeScore=56.8665;InbreedingCoeff=0.3141;MQ=31.47;MQ0=113;MQRankSum=-1.014;QD=1.60;ReadPosRankSum=-1.691;VQSLOD=0.4922;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:11,4:8:6.02:90,6,0	0/0:6,0:5:10.93:0,11,102	./.	./.	./.	0/0:22,0:12:14.86:0,15,138	0/0:29,0:12:32.72:0,33,309	./.	0/0:24,1:19:23.82:0,24,224	0/1:6,0:2:0:0,0,0	./.	0/1:11,3:10:38.43:73,0,38	0/0:23,0:14:20.05:0,20,117	0/0:23,0:20:22.73:0,23,112	./.	./.	0/0:17,0:11:8.61:0,9,75	1/1:6,0:4:6:53,6,0	0/1:10,0:6:29.45:36,0,29	0/0:9,0:8:14.71:0,15,107	0/0:19,0:7:0:0,0,0	0/0:9,0:8:5.68:0,6,28	0/0:16,0:12:2.73:0,3,14	0/1:34,3:24:12.69:13,0,84	0/0:11,0:6:14.96:0,15,135	1/1:7,0:3:0.47:1,0,0	./.	./.
chr10	7656241	.	GAC	G	447.51	PASS	AB=0.970;AC=14;AF=0.292;AN=48;BaseQRankSum=1.796;DP=524;FS=8.108;HRun=0;HaplotypeScore=57.4504;InbreedingCoeff=0.2284;MQ=30.09;MQ0=160;MQRankSum=0.461;QD=1.68;ReadPosRankSum=1.681;VQSLOD=-0.0372;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:20:8.55:0,9,97	0/0:12,0:7:5.70:0,6,68	./.	./.	./.	0/0:19,0:7:3.48:0,3,46	0/1:35,1:14:31.35:31,0,158	0/0:3,0:2:5.84:0,6,34	0/0:30,0:22:35.81:0,36,511	0/0:5,0:3:3.01:0,3,39	0/0:5,0:5:0:0,0,0	1/1:15,8:14:21.06:227,21,0	1/1:12,8:10:9.02:98,9,0	1/1:13,11:19:6.02:65,6,0	0/0:6,0:5:0:0,0,0	./.	0/1:27,1:20:6.94:7,0,281	0/0:7,0:4:5.93:0,6,58	0/1:18,1:8:20.71:21,0,103	0/1:37,0:28:10.56:11,0,101	0/0:27,0:14:8.96:0,9,82	0/1:36,0:21:36.45:36,0,222	1/1:16,2:8:6.02:66,6,0	0/1:24,2:11:0.75:27,0,1	0/0:16,0:8:9:0,9,95	0/0:18,0:11:17.91:0,18,160	0/0:8,0:7:5.99:0,6,51	0/0:9,0:6:3.01:0,3,31
chr10	7656249	.	C	CACAC	308.56	PASS	AB=1.000;AC=15;AF=0.341;AN=44;BaseQRankSum=-1.766;DP=586;FS=2.306;HRun=0;HaplotypeScore=69.9614;InbreedingCoeff=0.3145;MQ=31.09;MQ0=151;MQRankSum=-3.655;QD=1.90;ReadPosRankSum=-2.597;VQSLOD=0.6123;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:24:2.31:0,2,46	0/0:17,0:12:2.72:0,3,44	./.	./.	./.	0/0:23,0:10:1.93:0,2,45	0/1:37,0:16:25.82:26,0,182	1/1:8,0:6:6.12:26,6,0	0/0:34,0:29:18.62:0,19,347	1/1:5,0:3:2.94:18,3,0	./.	0/0:26,0:15:21.02:0,21,195	0/0:22,0:12:9.01:0,9,84	0/0:24,0:19:6.01:0,6,56	./.	./.	0/1:33,0:21:17.22:17,0,308	1/1:8,0:5:2.98:22,3,0	0/0:18,0:8:12.03:0,12,164	0/0:44,0:33:9.01:0,9,105	0/1:28,0:14:8.75:30,0,9	0/0:42,0:25:5.98:0,6,308	0/0:21,0:11:5.76:0,6,55	0/0:29,0:13:6.01:0,6,55	0/0:24,0:14:3.01:0,3,45	1/1:21,0:15:13.74:193,14,0	1/1:13,0:7:3.01:52,3,0	1/1:3,5:6:3.01:63,3,0
chr10	7656357	.	GACACACAC	G	2266.44	PASS	AB=0.906;AC=18;AF=0.360;AN=50;BaseQRankSum=-3.461;DP=548;FS=15.957;HRun=0;HaplotypeScore=106.4914;InbreedingCoeff=0.7285;MQ=34.86;MQ0=119;MQRankSum=-7.215;QD=15.11;ReadPosRankSum=0.605;VQSLOD=1.6430;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:19:8.76:9,0,296	0/0:3,0:5:6.01:0,6,89	0/0:21,0:1:3.01:0,3,78	./.	1/1:9,11:19:20.90:490,21,0	0/0:12,0:14:24.05:0,24,495	0/0:17,0:19:39.13:0,39,858	0/1:10,3:12:13.94:91,0,14	0/0:9,0:19:39.11:0,39,784	1/1:9,3:6:5.99:98,6,0	1/1:5,6:10:15.05:378,15,0	0/0:32,0:18:26.02:0,26,324	0/0:22,0:16:27.08:0,27,325	0/0:23,0:18:40.35:0,40,460	1/1:4,8:13:18.06:434,18,0	1/1:4,7:10:15.05:378,15,0	0/0:22,0:20:34.31:0,34,591	./.	0/0:13,0:15:21.03:0,21,319	0/0:8,0:12:11.24:0,11,381	./.	0/0:22,0:13:18.06:0,18,217	0/0:16,0:9:17.09:0,17,215	0/0:32,0:26:51.95:0,52,648	0/0:17,0:12:33.07:0,33,613	1/1:9,6:8:14.71:186,15,0	1/1:6,7:11:6.14:202,6,0	1/1:2,2:5:9.03:186,9,0
chr10	7656375	.	CACACA	C	1260.67	PASS	AB=1.000;AC=20;AF=0.357;AN=56;BaseQRankSum=13.323;DP=641;FS=34.904;HRun=0;HaplotypeScore=113.6442;InbreedingCoeff=0.3692;MQ=40.54;MQ0=102;MQRankSum=-1.471;QD=3.88;ReadPosRankSum=11.088;VQSLOD=-0.4504;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:38,0:26:7.47:89,0,7	0/0:10,0:10:18.53:0,19,322	0/0:23,0:5:15.05:0,15,251	0/0:29,0:8:24.08:0,24,312	0/1:26,0:25:99:151,0,118	0/0:20,0:15:22.01:0,22,343	0/0:24,0:19:45.15:0,45,690	0/0:16,0:15:20.21:0,20,502	0/0:28,0:26:52.89:0,53,723	0/0:18,0:14:13.42:0,13,417	0/1:12,0:11:19.71:111,0,20	1/1:31,1:20:19.89:133,20,0	1/1:29,0:19:21.34:70,21,0	1/1:25,1:22:28.60:106,29,0	0/1:15,0:15:51.41:133,0,51	0/1:17,0:16:95.76:96,0,193	0/0:44,0:30:51.13:0,51,697	0/0:10,0:6:18.05:0,18,212	0/0:22,0:20:57.39:0,57,771	0/0:20,0:17:8.97:0,9,369	0/0:27,0:19:12.04:0,12,151	1/1:25,0:13:14.08:46,14,0	1/1:22,1:16:17.24:116,17,0	1/1:34,1:28:54.51:288,55,0	0/0:25,0:17:40.54:0,41,572	0/1:16,0:14:14.28:14,0,357	0/1:17,0:16:57.21:57,0,133	0/1:12,0:12:44.63:45,0,244
chr10	7656377	.	CACA	C	4330.05	PASS	AB=1.000;AC=20;AF=0.357;AN=56;BaseQRankSum=8.194;DP=645;FS=30.384;HRun=0;HaplotypeScore=92.6400;InbreedingCoeff=0.4854;MQ=42.32;MQ0=99;MQRankSum=-1.350;QD=13.97;ReadPosRankSum=11.687;VQSLOD=2.1889;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:13,23:26:30.05:536,30,0	0/0:11,0:11:15.08:0,15,263	0/0:24,0:6:18.06:0,18,253	0/0:29,0:9:27.09:0,27,338	0/1:26,0:25:66.52:67,0,119	0/0:20,0:15:8.56:0,9,169	0/0:25,0:20:46.67:0,47,390	0/0:17,0:16:32.20:0,32,503	0/0:27,0:26:40.39:0,40,410	0/0:20,0:16:31.44:0,31,513	0/1:13,0:12:47.72:48,0,55	1/1:8,19:20:25.64:530,26,0	1/1:9,20:20:27.09:502,27,0	1/1:6,19:22:29.73:713,30,0	0/1:15,0:15:56.88:57,0,87	0/1:17,0:16:35.59:36,0,194	0/0:43,0:30:31.18:0,31,472	0/0:10,0:6:18.06:0,18,224	0/0:22,0:20:49.49:0,49,678	0/0:21,0:18:0.08:0,0,200	0/0:27,0:19:12.04:0,12,151	1/1:9,14:13:18.06:334,18,0	1/1:6,15:16:21.07:369,21,0	1/1:6,26:28:66.16:1113,66,0	0/0:23,0:17:20.70:0,21,308	0/0:16,0:14:10.27:0,10,384	0/1:18,0:17:17.50:18,0,167	0/1:13,0:13:7.87:8,0,235
chr10	7658677	.	AC	A	15402.52	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=12.388;DP=630;FS=3.693;HRun=1;HaplotypeScore=65.7752;InbreedingCoeff=0.9972;MQ=80.32;MQ0=0;MQRankSum=-3.236;QD=35.25;ReadPosRankSum=4.890;VQSLOD=4.9383;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,28:33:82.32:1193,82,0	0/0:6,0:6:18.06:0,18,285	0/0:19,0:19:20.46:0,20,602	0/0:12,0:12:29.41:0,29,386	1/1:0,33:33:96.02:1217,96,0	0/0:18,0:18:54.12:0,54,758	0/0:20,0:20:60.19:0,60,927	1/1:0,44:45:99:1750,135,0	0/0:14,0:14:42.10:0,42,614	1/1:1,31:32:96.19:1216,96,0	1/1:1,25:26:74.86:909,75,0	1/1:0,22:22:57.19:790,57,0	1/1:0,17:17:39.12:524,39,0	1/1:0,18:18:48.16:666,48,0	1/1:0,23:23:54.18:749,54,0	1/1:0,29:29:75.25:1037,75,0	0/0:28,0:28:84.25:0,84,1265	1/1:0,16:16:39.13:540,39,0	0/0:28,0:28:84.20:0,84,1181	0/0:24,0:24:72.13:0,72,1039	1/1:3,7:10:20.35:332,20,0	1/1:0,22:23:63.05:807,63,0	1/1:0,25:25:57.08:764,57,0	1/1:1,17:18:42.14:582,42,0	0/0:24,0:24:72.19:0,72,1045	1/1:0,24:24:72.21:954,72,0	1/1:1,26:27:66.22:914,66,0	1/1:0,16:16:33.11:457,33,0
chr10	7660601	.	TAC	T	574.56	PASS	AB=0.933;AC=28;AF=0.583;AN=48;BaseQRankSum=0.265;DP=649;FS=4.673;HRun=0;HaplotypeScore=151.9411;InbreedingCoeff=0.2654;MQ=55.71;MQ0=7;MQRankSum=-0.024;QD=1.42;ReadPosRankSum=2.519;VQSLOD=2.4904;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:32:0.85:0,1,2	1/1:8,0:8:2.04:6,2,0	./.	./.	0/1:19,0:15:0:0,0,0	0/1:20,0:20:3.96:27,0,4	1/1:24,2:26:6.48:65,6,0	0/0:21,0:21:0.89:0,1,2	1/1:17,0:22:8.56:43,9,0	1/1:23,0:23:2.84:14,3,0	1/1:16,0:15:2.84:9,3,0	1/1:18,0:20:6.20:30,6,0	0/1:19,0:22:15.36:17,0,15	./.	0/1:27,6:33:8.04:111,0,8	1/1:24,8:32:9.16:76,9,0	1/1:17,6:23:2.77:114,3,0	0/1:15,0:17:33.71:39,0,34	./.	1/1:17,5:22:9.02:93,9,0	0/0:46,0:44:27.97:0,28,281	1/1:24,0:31:2.76:14,3,0	0/1:14,0:14:0.01:0,0,0	0/1:25,0:24:0:0,0,0	0/1:23,3:26:15.73:55,0,16	0/0:22,0:22:15.50:0,16,173	0/0:15,0:15:26.88:0,27,261	0/0:13,0:13:18.08:0,18,144
chr10	7660927	.	T	TGATGGAGA	37885.26	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-5.169;DP=696;FS=3.596;HRun=0;HaplotypeScore=170.3941;InbreedingCoeff=0.9905;MQ=74.15;MQ0=0;MQRankSum=-16.784;QD=83.45;ReadPosRankSum=0.227;VQSLOD=5.2536;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,8:19:39.07:1171,39,0	0/0:10,0:10:30.06:0,30,719	0/0:30,0:28:69.22:0,69,1638	0/0:29,0:28:84.19:0,84,2041	1/1:6,6:12:18.05:682,18,0	0/0:24,0:24:60.20:0,60,1584	0/0:20,0:20:60.18:0,60,1509	1/1:9,25:40:99:4112,114,0	0/0:30,0:30:81.26:0,81,2117	1/1:13,12:25:62.57:2139,63,0	1/1:3,20:24:42.14:1839,42,0	1/1:12,21:34:75.19:2901,75,0	1/1:19,12:33:60.12:1905,60,0	1/1:12,19:32:63.16:2460,63,0	1/1:3,35:39:93.31:3873,93,0	1/1:5,36:45:18.39:4216,18,0	0/0:20,0:20:54.13:0,54,1236	1/1:0,11:11:33.11:1372,33,0	0/0:22,0:22:63.19:0,63,1536	0/0:27,0:27:78.27:0,78,2104	1/1:4,11:17:15.05:652,15,0	1/1:10,16:25:63.18:2279,63,0	1/1:10,7:17:33.10:1136,33,0	1/1:5,3:8:15.02:443,15,0	0/0:30,0:30:84.21:0,84,2094	1/1:4,25:34:84.06:2865,84,0	1/1:11,21:33:81.21:3238,81,0	1/1:1,4:5:15.05:603,15,0
chr10	7660971	.	T	TAC	5510.23	PASS	AB=0.892;AC=39;AF=0.696;AN=56;BaseQRankSum=-2.969;DP=663;FS=2.341;HRun=0;HaplotypeScore=244.1823;InbreedingCoeff=-0.3063;MQ=48.26;MQ0=7;MQRankSum=3.486;QD=8.77;ReadPosRankSum=-0.342;VQSLOD=4.0617;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:9,0:10:12.84:13,0,48	1/1:4,5:9:17.48:240,17,0	1/1:27,0:19:3.15:11,3,0	0/1:27,0:13:5.17:5,0,13	0/1:17,0:17:48.57:113,0,49	0/1:11,13:24:2.89:340,0,3	0/1:13,14:28:23.26:532,0,23	0/0:22,0:35:37.80:0,38,186	1/1:9,16:25:4.99:520,5,0	0/1:24,0:28:18.86:255,0,19	0/1:16,0:19:28.14:92,0,28	1/1:31,0:32:22.61:243,23,0	0/1:29,0:33:23.76:236,0,24	1/1:21,0:26:0.85:49,1,0	0/1:39,0:43:45.82:251,0,46	0/1:29,0:38:74.62:163,0,75	0/1:9,10:21:10.10:299,0,10	0/1:14,0:16:14.15:37,0,14	0/1:15,4:19:43.42:219,0,43	1/1:13,9:23:1.62:452,2,0	1/1:11,0:11:4.09:15,4,0	0/1:21,0:23:8.85:89,0,9	1/1:11,0:12:5.47:36,5,0	1/1:13,0:13:5.33:68,5,0	0/1:15,19:34:68.03:635,0,68	1/1:25,0:27:24.93:234,25,0	1/1:33,0:35:7.29:275,7,0	1/1:5,0:5:11.92:87,12,0
chr10	7660992	.	A	ACACACATTAG	18359.35	PASS	AB=0.705;AC=34;AF=0.607;AN=56;BaseQRankSum=3.977;DP=744;FS=10.636;HRun=0;HaplotypeScore=246.3869;InbreedingCoeff=0.8203;MQ=46.21;MQ0=12;MQRankSum=-13.664;QD=39.15;ReadPosRankSum=0.610;VQSLOD=3.0424;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:6,8:15:81.58:213,0,82	0/0:10,0:10:21.40:0,21,304	0/0:49,0:23:42.60:0,43,784	0/0:42,0:20:14.63:0,15,719	1/1:6,0:25:33.11:888,33,0	0/0:28,0:28:56.61:0,57,951	0/0:25,0:25:51.53:0,52,735	1/1:31,0:35:95.85:1398,96,0	0/0:22,0:22:51.15:0,51,773	1/1:8,1:34:83.53:2035,84,0	1/1:11,0:16:26.89:586,27,0	1/1:9,25:40:45.12:1776,45,0	1/1:10,32:46:60.20:2273,60,0	1/1:12,17:32:29.98:619,30,0	1/1:19,0:40:80.08:1990,80,0	1/1:18,0:34:72.60:1609,73,0	0/0:23,0:23:48.16:0,48,792	0/1:8,0:11:35.24:470,0,35	0/0:19,0:19:47.88:0,48,719	0/0:24,0:24:60.12:0,60,977	1/1:0,0:9:6.49:83,6,0	1/1:5,18:24:30.02:890,30,0	1/1:6,12:17:9.92:241,10,0	1/1:6,15:22:14.56:557,15,0	0/0:33,0:33:75.23:0,75,1289	1/1:12,0:27:74.11:1299,74,0	1/1:9,0:33:71.64:1179,72,0	1/1:2,0:6:12.04:257,12,0
chr10	7661452	.	T	TAC	20424.85	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-12.239;DP=705;FS=3.239;HRun=0;HaplotypeScore=77.6913;InbreedingCoeff=0.9953;MQ=78.94;MQ0=0;MQRankSum=-3.504;QD=41.68;ReadPosRankSum=1.942;VQSLOD=6.3469;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,42:49:99:2091,123,0	0/0:7,0:7:12.04:0,12,156	0/0:17,0:17:39.07:0,39,443	0/0:18,0:18:42.12:0,42,507	1/1:3,25:28:69.24:1173,69,0	0/0:23,0:23:57.18:0,57,741	0/0:28,0:28:72.23:0,72,936	1/1:10,23:34:72.23:1199,72,0	0/0:24,0:24:66.21:0,66,858	1/1:4,19:23:60.21:1014,60,0	1/1:4,21:25:66.23:1116,66,0	1/1:4,20:24:57.20:969,57,0	1/1:1,24:26:69.24:1173,69,0	1/1:4,19:23:54.18:918,54,0	1/1:3,29:33:81.28:1378,81,0	1/1:2,28:30:42.25:1288,42,0	0/0:23,0:23:63.20:0,63,819	1/1:1,14:15:36.12:612,36,0	0/0:29,0:29:66.20:0,66,844	0/0:26,0:26:66.21:0,66,858	1/1:4,40:45:99:1837,108,0	1/1:1,14:16:39.13:663,39,0	1/1:4,21:25:63.22:1069,63,0	1/1:7,26:34:69.24:1174,69,0	0/0:20,0:20:60.16:0,60,738	1/1:2,19:21:57.20:969,57,0	1/1:1,27:28:75.26:1273,75,0	1/1:0,10:10:30.10:510,30,0
chr10	7662231	.	GAGAAAA	G	9429.29	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=13.439;DP=561;FS=8.139;HRun=0;HaplotypeScore=139.0902;InbreedingCoeff=0.9410;MQ=66.44;MQ0=0;MQRankSum=-11.773;QD=26.49;ReadPosRankSum=2.463;VQSLOD=3.7175;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,15:29:21.07:433,21,0	0/0:12,0:12:21.07:0,21,660	0/0:30,0:26:33.10:0,33,781	0/0:16,0:14:17.93:0,18,353	1/1:4,16:20:26.85:431,27,0	0/0:22,0:22:60.20:0,60,1768	0/0:20,0:20:39.13:0,39,1241	1/1:13,16:29:48.07:778,48,0	0/0:25,0:25:48.16:0,48,1424	1/1:8,17:25:48.10:905,48,0	1/1:11,12:23:21.07:442,21,0	1/1:10,10:20:21.07:441,21,0	1/1:6,10:16:24.08:505,24,0	1/1:6,13:19:27.09:542,27,0	1/1:12,14:26:39.13:812,39,0	1/1:4,13:17:39.13:813,39,0	0/0:12,0:12:18.06:0,18,592	1/1:10,8:18:15.04:315,15,0	0/0:25,0:25:45.15:0,45,1270	0/0:24,0:24:60.21:0,60,1850	1/1:3,6:9:3.01:63,3,0	1/1:7,10:17:21.07:416,21,0	1/1:5,10:15:24.08:505,24,0	1/1:7,6:13:5.69:125,6,0	0/0:19,0:19:45.15:0,45,1389	1/1:8,12:20:38.80:767,39,0	1/1:15,18:33:48.15:970,48,0	1/1:4,3:7:9.03:165,9,0
chr10	7662536	.	A	AGTCATGTGAC	39799.74	PASS	AB=0.957;AC=37;AF=0.661;AN=56;BaseQRankSum=14.004;DP=576;FS=8.049;HRun=0;HaplotypeScore=232.4267;InbreedingCoeff=0.9029;MQ=74.55;MQ0=0;MQRankSum=-17.883;QD=101.01;ReadPosRankSum=1.659;VQSLOD=4.0714;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,12:28:33.11:1772,33,0	0/0:8,0:8:24.08:0,24,787	0/0:12,0:12:30.10:0,30,760	0/0:25,0:25:66.09:0,66,1530	1/1:9,11:20:22.72:1280,23,0	0/1:21,1:22:94.67:95,0,1915	0/0:23,0:23:66.23:0,66,2092	1/1:22,6:30:84.22:3505,84,0	0/0:18,0:18:54.17:0,54,1706	1/1:8,8:18:48.16:2527,48,0	1/1:5,5:11:14.80:801,15,0	1/1:14,11:26:63.22:3324,63,0	1/1:16,11:30:57.20:3036,57,0	1/1:13,20:33:75.26:3971,75,0	1/1:7,12:21:48.16:2564,48,0	1/1:3,10:13:36.12:1931,36,0	0/0:36,0:36:99:0,102,3331	1/1:3,14:17:51.18:2741,51,0	0/0:21,0:21:63.22:0,63,2062	0/0:20,0:20:60.21:0,60,1971	1/1:14,6:21:14.68:793,15,0	1/1:9,8:17:15.05:805,15,0	1/1:5,2:7:9.03:452,9,0	1/1:8,14:22:42.14:2237,42,0	0/0:19,0:19:54.19:0,54,1833	1/1:16,10:27:78.27:3653,78,0	1/1:10,13:24:66.20:3185,66,0	1/1:1,6:7:21.07:1130,21,0
chr10	7663305	.	C	CT	950.09	PASS	AB=1.000;AC=30;AF=0.536;AN=56;BaseQRankSum=11.038;DP=358;FS=46.155;HRun=0;HaplotypeScore=91.6343;InbreedingCoeff=0.6282;MQ=80.13;MQ0=4;MQRankSum=-1.800;QD=4.75;ReadPosRankSum=-0.939;VQSLOD=1.3062;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:13,1:14:16.23:88,16,0	0/0:10,0:10:30.07:0,30,384	0/0:19,0:17:34.99:0,35,431	0/0:27,0:19:31.95:0,32,409	1/1:8,0:8:12.84:53,13,0	0/0:17,0:17:45.12:0,45,579	0/0:29,0:29:84.13:0,84,1079	1/1:23,0:23:48.76:236,49,0	0/0:7,0:7:21.06:0,21,276	0/1:10,0:10:19.96:26,0,20	0/1:8,0:8:4.72:38,0,5	1/1:11,0:11:17.59:78,18,0	0/1:8,0:8:6.56:11,0,7	0/0:7,0:7:7.05:0,7,37	1/1:15,1:16:18.77:101,19,0	1/1:15,2:17:19:180,19,0	0/0:10,0:10:30.08:0,30,398	1/1:12,0:12:9.36:40,9,0	0/0:9,0:9:24:0,24,284	0/0:12,0:12:36:0,36,460	1/1:18,0:18:33.38:161,33,0	1/1:6,1:7:3.14:13,3,0	1/1:6,0:6:6.48:28,6,0	1/1:15,0:15:5.39:29,5,0	0/0:11,0:11:33.03:0,33,420	0/1:6,0:6:9.01:18,0,9	1/1:17,0:17:1.51:41,2,0	1/1:4,0:4:3.78:11,4,0
chr10	7663333	.	CAGAGAGAGAGACAGAGAG	C	2194.92	PASS	AB=0.883;AC=21;AF=0.389;AN=54;BaseQRankSum=4.686;DP=437;FS=12.560;HRun=0;HaplotypeScore=157.5687;InbreedingCoeff=0.3185;MQ=70.45;MQ0=30;MQRankSum=-0.086;QD=16.14;ReadPosRankSum=2.352;VQSLOD=1.9668;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:2,9:11:9.03:303,9,0	0/0:5,0:5:11.98:0,12,204	0/0:82,0:28:36.17:0,36,626	0/0:97,0:22:2.10:0,2,215	1/1:2,0:6:3.01:43,3,0	0/0:19,0:19:39.06:0,39,1488	0/0:20,0:20:50.89:0,51,893	0/1:6,8:14:99:197,0,104	0/0:10,0:10:23.92:0,24,558	1/1:2,6:8:10.74:264,11,0	1/1:2,0:2:5.99:50,6,0	0/1:10,0:10:31.93:32,0,129	0/1:8,0:8:18.95:19,0,22	0/0:5,0:5:3:0,3,28	1/1:1,10:11:6:299,6,0	1/1:10,3:14:27.01:700,27,0	0/0:12,0:12:20.99:0,21,742	0/1:2,10:12:99:257,0,103	0/0:7,0:6:12.03:0,12,415	0/0:14,0:14:30:0,30,709	0/1:12,0:12:33.98:34,0,69	0/1:9,0:9:0:0,0,0	./.	0/0:11,0:11:3:0,3,28	0/0:10,0:9:11.98:0,12,230	0/1:4,0:4:17.91:18,0,69	1/1:4,0:15:8.08:151,8,0	0/0:3,0:3:6.02:0,6,195
chr10	7663335	.	GAGAGAGAGAC	G	1971.53	PASS	AB=1.000;AC=29;AF=0.537;AN=54;BaseQRankSum=4.606;DP=429;FS=19.226;HRun=0;HaplotypeScore=113.8902;InbreedingCoeff=0.5990;MQ=67.12;MQ0=30;MQRankSum=-0.125;QD=13.69;ReadPosRankSum=2.154;VQSLOD=1.2436;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:12,0:12:8.91:112,9,0	0/0:5,0:5:11.94:0,12,90	0/0:79,0:25:4.35:0,4,252	0/0:96,0:21:2.10:0,2,117	1/1:6,0:6:3:28,3,0	0/0:18,0:18:39.04:0,39,651	0/0:23,0:23:59.90:0,60,720	0/1:12,0:12:17.76:130,0,18	0/0:10,0:10:23.92:0,24,268	1/1:8,0:8:12.43:144,12,0	1/1:2,0:2:5.99:50,6,0	1/1:8,2:10:18:288,18,0	1/1:2,7:9:6.01:119,6,0	1/1:1,3:4:3.01:94,3,0	1/1:11,0:11:6:149,6,0	1/1:14,0:14:27.01:419,27,0	0/0:12,0:12:20.99:0,21,341	0/1:12,0:12:63.90:107,0,64	0/0:7,0:6:11.88:0,12,102	0/0:13,0:13:30:0,30,408	1/1:9,0:9:14.98:124,15,0	0/1:9,0:9:0:0,0,0	./.	1/1:2,9:11:3.01:94,3,0	0/0:11,0:10:11.98:0,12,129	1/1:4,0:4:8.97:75,9,0	1/1:11,0:11:8.88:225,9,0	0/0:3,0:3:6.02:0,6,122
chr10	7663343	.	GAC	G	1040.81	PASS	AB=0.926;AC=36;AF=0.667;AN=54;BaseQRankSum=5.417;DP=408;FS=36.442;HRun=0;HaplotypeScore=75.4364;InbreedingCoeff=0.3140;MQ=64.14;MQ0=30;MQRankSum=-1.229;QD=3.72;ReadPosRankSum=0.880;VQSLOD=-0.0992;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,0:10:8.84:55,9,0	0/1:7,0:7:3.97:4,0,75	0/0:74,0:21:18.34:0,18,230	0/1:93,0:19:0.69:1,0,78	0/1:5,0:4:0:0,0,0	0/0:18,0:18:12.67:0,13,198	0/1:24,0:24:50.69:51,0,315	1/1:9,0:9:3.87:134,4,0	0/0:10,0:10:22.43:0,22,161	1/1:6,0:6:13.15:91,13,0	1/1:2,0:2:5.99:50,6,0	1/1:11,0:11:3.37:159,3,0	1/1:8,0:8:5.96:45,6,0	1/1:3,0:3:2.97:20,3,0	1/1:11,0:11:5.89:38,6,0	1/1:12,0:12:26.79:196,27,0	0/0:10,0:10:12.02:0,12,116	1/1:11,0:11:5.68:37,6,0	0/1:6,1:6:16.22:16,0,46	0/1:15,0:15:43.91:44,0,165	0/1:10,0:10:28.19:103,0,28	0/1:1,8:9:0:0,0,0	./.	1/1:10,0:10:2.97:20,3,0	0/0:9,0:8:10.79:0,11,76	1/1:3,0:3:8.97:75,9,0	1/1:11,0:11:8.82:58,9,0	1/1:3,0:3:2.80:7,3,0
chr10	7663345	.	CAGAG	C	1097.06	PASS	AB=0.990;AC=34;AF=0.654;AN=52;BaseQRankSum=1.968;DP=432;FS=5.052;HRun=0;HaplotypeScore=87.5475;InbreedingCoeff=0.1767;MQ=61.61;MQ0=31;MQRankSum=-1.717;QD=4.92;ReadPosRankSum=4.414;VQSLOD=0.8615;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:10,0:10:3:28,3,0	1/1:6,0:7:3:28,3,0	./.	0/0:92,0:18:0:0,0,0	1/1:5,0:4:2.92:17,3,0	1/1:11,7:18:18.05:261,18,0	1/1:23,1:24:5.62:194,6,0	0/1:10,0:10:0.25:0,0,0	1/1:8,2:10:3.01:47,3,0	1/1:6,0:6:1.77:26,2,0	./.	0/1:15,0:15:38.04:38,0,54	0/1:9,0:9:18.95:20,0,19	1/1:5,0:5:3:26,3,0	1/1:11,0:11:6.01:56,6,0	1/1:13,0:13:12.01:112,12,0	1/1:6,5:11:6.02:94,6,0	0/1:11,0:11:22.37:22,0,41	1/1:6,0:6:6.01:66,6,0	0/1:15,0:16:3.81:56,0,4	0/0:12,0:12:11.84:0,12,118	0/0:13,0:13:8.97:0,9,74	0/0:10,0:9:0:0,0,0	0/1:13,0:13:17.96:20,0,18	1/1:5,5:9:3.01:47,3,0	0/0:4,0:4:2.94:0,3,18	1/1:12,0:12:8.67:81,9,0	0/0:3,0:3:6.02:0,6,65
chr10	7664130	.	T	TCCCC	3428.93	PASS	AB=0.985;AC=22;AF=0.393;AN=56;BaseQRankSum=14.912;DP=422;FS=4.344;HRun=4;HaplotypeScore=119.7527;InbreedingCoeff=-0.0127;MQ=83.84;MQ0=1;MQRankSum=-12.662;QD=13.72;ReadPosRankSum=4.987;VQSLOD=0.0152;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:20,0:20:4.03:280,0,4	0/0:10,0:10:27.09:0,27,468	0/0:20,0:19:38.31:0,38,696	0/0:14,0:14:1.32:0,1,391	1/1:10,1:11:21.04:226,21,0	0/0:27,0:27:75.18:0,75,1208	0/0:23,0:23:69.21:0,69,1134	0/1:15,1:16:95.79:135,0,96	0/0:22,0:22:63.17:0,63,1048	0/1:17,0:17:52.56:138,0,53	1/1:12,0:12:4.04:155,4,0	0/1:17,0:17:23.84:323,0,24	0/1:18,0:18:33.87:265,0,34	0/1:16,0:16:24.93:160,0,25	0/1:13,0:13:9.94:218,0,10	0/1:16,1:17:20.91:282,0,21	0/0:18,0:18:51.08:0,51,767	0/1:8,0:8:4.97:87,0,5	0/0:12,0:12:29.73:0,30,378	0/0:7,0:7:15.03:0,15,228	0/1:8,0:8:14.98:47,0,15	0/1:9,1:10:29.46:133,0,29	0/1:15,0:15:43.85:171,0,44	1/1:16,0:16:24.50:231,25,0	0/0:19,0:19:25.24:0,25,727	0/1:15,0:15:40.85:194,0,41	0/1:10,0:10:2.93:143,0,3	1/1:11,0:10:27.01:239,27,0
chr10	7664137	.	C	CCACCGT	17732.85	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=2.548;DP=468;FS=3.100;HRun=0;HaplotypeScore=104.5323;InbreedingCoeff=0.9714;MQ=80.03;MQ0=1;MQRankSum=-13.799;QD=59.91;ReadPosRankSum=2.037;VQSLOD=5.3010;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,18:25:45.15:1540,45,0	0/0:9,0:9:27.09:0,27,637	0/0:17,0:17:42.14:0,42,942	0/0:14,0:14:27.86:0,28,658	1/1:6,9:17:24.08:848,24,0	0/0:25,0:25:66.21:0,66,1491	0/0:25,0:25:66.20:0,66,1426	1/1:9,5:20:54.12:1470,54,0	0/0:23,0:23:66.18:0,66,1418	1/1:4,9:16:45.11:1276,45,0	1/1:3,11:16:21.07:742,21,0	1/1:5,14:21:48.12:1615,48,0	1/1:3,16:20:36.12:1209,36,0	1/1:6,11:20:30.10:1063,30,0	1/1:3,9:13:27.09:955,27,0	1/1:4,12:18:36.12:1277,36,0	0/0:19,0:19:51.15:0,51,1111	1/1:2,6:10:12.04:427,12,0	0/0:14,0:14:33.09:0,33,644	0/0:6,0:6:18.06:0,18,398	1/1:1,9:12:6.02:213,6,0	1/1:6,3:10:12.04:425,12,0	1/1:5,11:18:21.06:744,21,0	1/1:1,13:19:27.56:912,28,0	0/0:19,0:19:48.16:0,48,1089	1/1:5,10:17:39.13:1335,39,0	1/1:2,7:11:21.06:664,21,0	1/1:1,10:12:30.10:1019,30,0
chr10	7665368	.	A	AG	4245.64	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=17.933;DP=581;FS=6.060;HRun=2;HaplotypeScore=249.6165;InbreedingCoeff=0.9678;MQ=58.59;MQ0=0;MQRankSum=-16.887;QD=10.78;ReadPosRankSum=2.637;VQSLOD=3.3062;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:21:41.92:282,42,0	0/0:11,0:11:30.09:0,30,372	0/0:10,0:10:28.39:0,28,305	0/0:4,0:4:3.01:0,3,37	1/1:32,0:32:71.52:472,72,0	0/0:28,0:28:81.24:0,81,992	0/0:20,0:20:60.18:0,60,732	1/1:24,1:25:39.29:211,39,0	0/0:21,0:21:63.20:0,63,781	1/1:29,0:29:52.43:246,52,0	1/1:22,0:22:36.85:172,37,0	1/1:29,0:29:57.76:296,58,0	1/1:23,0:23:55.99:328,56,0	1/1:26,0:26:48.67:253,49,0	1/1:21,2:23:49.69:309,50,0	1/1:18,0:18:33.80:163,34,0	0/0:24,0:24:69.22:0,69,855	1/1:9,0:9:19.55:95,20,0	0/0:18,0:18:51.13:0,51,600	0/0:35,0:35:99:0,105,1301	1/1:12,0:12:11.93:111,12,0	1/1:24,1:25:39.97:228,40,0	1/1:20,0:20:49.47:309,49,0	1/1:27,0:26:32.47:186,32,0	0/0:16,0:16:48.14:0,48,584	1/1:17,0:17:35.87:179,36,0	1/1:25,0:24:54.41:251,54,0	1/1:11,0:11:25.18:155,25,0
chr10	7665370	.	GTTCATCAAAAAATA	G	33468.01	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=17.915;DP=487;FS=2.992;HRun=0;HaplotypeScore=257.3823;InbreedingCoeff=0.9683;MQ=59.36;MQ0=0;MQRankSum=-17.341;QD=112.31;ReadPosRankSum=3.454;VQSLOD=4.2918;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,17:18:39.13:1623,39,0	0/0:11,0:11:33.11:0,33,2207	0/0:10,0:10:27.09:0,27,1205	0/0:1,0:1:3.01:0,3,160	1/1:3,24:27:69.18:2790,69,0	0/0:29,0:29:87.30:0,87,5478	0/0:22,0:22:63.22:0,63,3919	1/1:1,14:15:45.14:1731,45,0	0/0:21,0:21:63.22:0,63,4208	1/1:0,21:21:61.40:2454,61,0	1/1:0,14:14:42.09:1682,42,0	1/1:0,22:22:63.22:2678,63,0	1/1:1,22:23:57.20:2408,57,0	1/1:0,19:19:54.19:2293,54,0	1/1:2,17:19:54.05:2076,54,0	1/1:1,12:13:36.12:1536,36,0	0/0:25,0:25:75.26:0,75,4888	1/1:0,7:7:21.07:896,21,0	0/0:18,0:18:48.16:0,48,3136	0/0:36,0:36:99:0,108,6573	1/1:1,4:5:12.04:460,12,0	1/1:1,17:18:45.09:1805,45,0	1/1:0,17:18:54.19:2276,54,0	1/1:0,12:12:36.12:1518,36,0	0/0:16,0:16:45.15:0,45,2903	1/1:1,14:15:39.13:1663,39,0	1/1:1,22:23:57.20:2432,57,0	1/1:0,9:9:27.09:1146,27,0
chr10	7667691	.	G	GT	3159.58	PASS	AB=0.929;AC=16;AF=0.286;AN=56;BaseQRankSum=-8.722;DP=552;FS=10.848;HRun=10;HaplotypeScore=58.2717;InbreedingCoeff=0.8367;MQ=83.65;MQ0=1;MQRankSum=-0.907;QD=18.05;ReadPosRankSum=-1.591;VQSLOD=3.0558;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:29:57.23:0,57,552	0/0:10,0:10:29.95:0,30,243	0/0:19,0:19:28.39:0,28,218	0/0:23,0:25:22.46:0,22,210	1/1:4,14:19:41.90:418,42,0	0/0:16,1:17:12.99:0,13,312	0/0:14,0:14:29.94:0,30,243	1/1:15,15:32:62.63:599,63,0	0/0:23,0:23:62.91:0,63,517	1/1:7,21:28:41.49:636,41,0	1/1:4,16:20:22.01:423,22,0	0/0:20,0:21:55.95:0,56,444	0/0:22,0:22:62.89:0,63,511	0/0:17,0:17:44.89:0,45,361	1/1:3,13:16:33.08:352,33,0	1/1:3,19:22:26.48:487,26,0	0/0:21,0:21:46.75:0,47,375	1/1:4,17:23:23.18:420,23,0	0/0:22,0:22:62.91:0,63,515	0/0:23,0:24:58.69:0,59,461	0/0:10,0:10:14.94:0,15,123	0/0:10,0:10:26.95:0,27,221	0/0:25,0:25:56.90:0,57,467	0/1:9,0:9:5:5,0,170	0/0:24,1:25:33.87:0,34,473	0/0:16,0:16:35.95:0,36,296	0/0:26,0:26:68.91:0,69,566	0/1:5,1:6:20:20,0,62
chr10	7674447	.	AAGAGAGAGAGAGAG	A	4105.24	PASS	AB=0.832;AC=18;AF=0.360;AN=50;BaseQRankSum=5.705;DP=559;FS=6.400;HRun=0;HaplotypeScore=195.6386;InbreedingCoeff=0.4837;MQ=58.28;MQ0=20;MQRankSum=-6.382;QD=14.87;ReadPosRankSum=-1.293;VQSLOD=2.0242;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:15:18.06:0,18,800	0/0:4,0:4:6.02:0,6,225	./.	0/1:55,0:21:0:0,0,0	1/1:11,7:18:11.95:254,12,0	0/0:13,0:19:18.06:0,18,553	0/0:13,0:15:21.07:0,21,709	./.	0/0:16,0:24:39.13:0,39,1317	1/1:17,9:26:26.96:659,27,0	1/1:16,4:20:5.98:138,6,0	0/1:10,0:20:15.83:282,0,16	0/1:12,0:17:63.32:103,0,63	1/1:12,2:16:15.05:310,15,0	1/1:17,10:27:24.08:872,24,0	1/1:15,11:27:30.10:1159,30,0	0/0:7,0:14:21.07:0,21,725	0/1:11,6:17:62.25:109,0,62	0/0:20,0:20:15.05:0,15,422	0/0:14,0:18:33.09:0,33,910	0/0:15,0:15:12.03:0,12,336	0/1:10,0:12:27.03:105,0,27	./.	0/1:20,0:19:33.73:115,0,34	0/0:14,0:19:39.13:0,39,1585	0/0:10,0:14:21.07:0,21,692	0/0:20,0:25:45.15:0,45,2116	0/0:12,0:11:24.08:0,24,755
chr10	7674708	.	A	AATAC	14772.95	PASS	AB=0.709;AC=35;AF=0.625;AN=56;BaseQRankSum=-11.276;DP=798;FS=4.627;HRun=0;HaplotypeScore=117.3571;InbreedingCoeff=0.5706;MQ=63.30;MQ0=4;MQRankSum=-1.334;QD=23.98;ReadPosRankSum=-0.095;VQSLOD=4.5829;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:22,16:40:27.09:620,27,0	0/0:17,0:17:39.13:0,39,602	1/1:23,0:19:0.47:1,0,0	0/1:24,0:18:0:0,0,0	1/1:13,17:30:45.15:1042,45,0	0/0:33,0:34:54.15:0,54,777	0/0:25,0:25:30.04:0,30,378	1/1:41,0:40:30.03:362,30,0	0/0:32,0:32:48.16:0,48,743	0/1:18,22:40:17.96:1426,0,18	1/1:12,13:27:37.37:850,37,0	0/1:11,15:26:1.44:944,0,1	1/1:18,15:34:45.15:1052,45,0	1/1:6,16:22:36.12:847,36,0	1/1:22,17:40:48.16:1130,48,0	0/1:18,15:33:51.04:806,0,51	0/0:34,0:36:64.38:0,64,869	1/1:8,12:20:33.11:777,33,0	0/0:17,0:18:27.08:0,27,381	0/0:20,0:20:30.08:0,30,426	1/1:13,15:28:21.07:495,21,0	1/1:10,15:26:38.83:882,39,0	1/1:11,8:21:12.04:282,12,0	1/1:13,10:24:21.07:494,21,0	0/1:24,16:42:1.44:943,0,1	1/1:8,14:23:40.21:827,40,0	0/1:14,23:39:4.44:861,0,4	0/1:7,6:12:37.56:132,0,38
chr10	7674981	.	TGGGGGC	T	10252.95	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=14.137;DP=644;FS=25.432;HRun=0;HaplotypeScore=141.3708;InbreedingCoeff=0.9829;MQ=77.16;MQ0=0;MQRankSum=-15.019;QD=38.54;ReadPosRankSum=1.696;VQSLOD=2.9770;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,29:32:48.16:1067,48,0	0/0:17,0:17:42.10:0,42,1146	0/0:22,0:22:56.87:0,57,1553	0/0:19,0:19:46.15:0,46,1163	0/0:24,0:24:69.22:0,69,2269	0/0:12,0:12:33.11:0,33,1089	0/0:32,0:32:90.31:0,90,3112	0/0:22,0:22:57.18:0,57,1592	0/0:20,0:20:57.20:0,57,1943	0/0:25,0:25:75.25:0,75,2395	0/0:13,0:13:33.04:0,33,916	1/1:0,30:30:48.16:1067,48,0	1/1:3,21:24:42.14:993,42,0	1/1:0,25:25:54.18:1237,54,0	0/0:14,0:14:42.14:0,42,1433	0/0:26,0:26:75.26:0,75,2624	0/0:41,0:41:99:0,120,3952	0/0:22,0:22:63.20:0,63,2164	0/0:12,0:12:36.12:0,36,1198	0/0:24,0:24:72.24:0,72,2363	1/1:2,15:17:5.97:141,6,0	1/1:2,20:22:29.86:586,30,0	1/1:1,20:21:21.07:496,21,0	1/1:1,26:27:51.65:1206,52,0	0/0:33,0:32:93.32:0,93,3175	1/1:1,25:26:69.13:1182,69,0	1/1:1,35:36:83.05:1851,83,0	1/1:0,6:6:18.06:426,18,0
chr10	7677672	.	TA	T	4222.88	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=13.405;DP=497;FS=0.380;HRun=7;HaplotypeScore=46.7597;InbreedingCoeff=0.9947;MQ=73.19;MQ0=1;MQRankSum=-1.929;QD=25.91;ReadPosRankSum=1.652;VQSLOD=5.1470;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:60.66:0,61,754	0/0:10,0:10:30.10:0,30,377	0/0:11,0:11:19.58:0,20,205	0/0:10,0:10:18.05:0,18,215	1/1:1,31:32:90.20:918,90,0	0/0:25,0:25:63.20:0,63,791	0/0:13,0:13:36.11:0,36,442	1/1:2,19:21:57.06:557,57,0	0/0:15,0:15:45.14:0,45,565	1/1:2,17:19:51.11:520,51,0	1/1:1,23:23:57.12:581,57,0	0/0:20,0:20:60.18:0,60,738	0/0:16,0:16:45.14:0,45,566	0/0:7,0:7:21.05:0,21,248	1/1:1,20:21:57.13:581,57,0	1/1:1,18:19:17.88:484,18,0	0/0:16,0:16:48.15:0,48,602	1/1:5,22:26:57.13:581,57,0	0/0:13,0:13:33.11:0,33,415	0/0:25,0:25:69.21:0,69,852	0/0:15,0:15:45.13:0,45,552	0/0:8,0:8:24.08:0,24,301	0/0:22,0:22:60.19:0,60,755	0/0:17,0:17:42.13:0,42,527	0/0:22,0:22:60.19:0,60,751	0/0:13,0:13:39.12:0,39,491	0/0:21,0:21:60.16:0,60,728	0/0:13,0:13:39.12:0,39,491
chr10	7677834	.	TACACAC	T	597.01	PASS	AB=0.600;AC=13;AF=0.325;AN=40;BaseQRankSum=4.991;DP=419;FS=1.203;HRun=0;HaplotypeScore=121.4996;InbreedingCoeff=0.7429;MQ=61.58;MQ0=13;MQRankSum=-4.563;QD=5.33;ReadPosRankSum=1.496;VQSLOD=1.8090;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:19:14.09:0,14,141	0/0:10,0:10:9.97:0,10,143	./.	./.	./.	0/0:15,0:16:21.07:0,21,427	0/0:11,0:11:6.02:0,6,135	./.	0/0:13,0:13:24.08:0,24,602	1/1:12,0:15:12.04:157,12,0	./.	1/1:19,6:25:9.01:138,9,0	1/1:12,5:18:15.05:284,15,0	1/1:9,2:14:3.01:47,3,0	./.	1/1:9,0:14:5.69:53,6,0	0/0:20,0:21:30.03:0,30,663	./.	0/0:21,0:21:3.01:0,3,67	0/0:13,0:12:18.06:0,18,442	0/0:23,0:22:24.08:0,24,628	./.	0/1:2,3:6:0:0,0,0	1/1:19,0:19:3:60,3,0	0/0:13,0:15:27.09:0,27,840	0/0:8,0:8:12.03:0,12,231	0/0:13,0:17:26.84:0,27,495	0/0:11,0:11:12.01:0,12,269
chr10	7677884	.	TAGATAGAGACAGAGACAG	T	1661.49	PASS	AB=0.923;AC=13;AF=0.232;AN=56;BaseQRankSum=6.611;DP=512;FS=3.368;HRun=0;HaplotypeScore=240.4357;InbreedingCoeff=0.7140;MQ=57.77;MQ0=13;MQRankSum=-0.579;QD=18.67;ReadPosRankSum=-1.096;VQSLOD=1.9118;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:38.59:0,39,2734	0/0:4,0:4:9.03:0,9,736	0/0:45,0:26:45.69:0,46,1656	0/0:58,0:35:69.60:0,70,2662	1/1:5,8:13:0.89:2,1,0	0/0:15,0:15:30.10:0,30,2095	0/0:10,0:9:21.07:0,21,1571	1/1:11,8:17:24.07:509,24,0	0/0:15,0:15:21.07:0,21,1471	1/1:8,4:11:9.03:442,9,0	1/1:0,8:8:0.89:2,1,0	0/0:17,0:17:27.09:0,27,2096	0/0:19,0:19:34:0,34,2327	0/0:13,0:13:24.08:0,24,1720	0/0:6,8:14:0.47:0,0,1	1/1:6,5:11:3.01:147,3,0	0/0:25,0:25:54.19:0,54,3968	1/1:6,8:14:11.88:588,12,0	0/0:16,0:16:21.54:0,22,1141	0/0:15,0:15:30.10:0,30,2264	0/0:35,0:34:69.05:0,69,4430	0/0:5,0:5:15.05:0,15,1076	0/0:15,0:15:24.08:0,24,1631	0/0:17,0:16:32.40:0,32,2643	0/0:19,0:18:36.11:0,36,1981	0/1:11,1:11:99:120,0,1751	0/0:20,0:20:45.15:0,45,3182	0/0:18,0:18:45.15:0,45,2986
chr10	7678549	.	G	GGTA	2469.90	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=11.124;DP=682;FS=12.873;HRun=0;HaplotypeScore=133.0041;InbreedingCoeff=0.9921;MQ=87.39;MQ0=0;MQRankSum=-10.048;QD=34.79;ReadPosRankSum=1.613;VQSLOD=3.9585;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:81.21:0,81,1411	0/0:7,0:7:21.07:0,21,387	0/0:29,0:29:83.26:0,83,1428	0/0:26,0:26:72.22:0,72,1289	0/0:33,0:33:93.32:0,93,1718	0/0:31,0:30:93.28:0,93,1672	0/0:15,0:15:45.14:0,45,808	0/0:32,0:32:90.24:0,90,1408	0/0:25,0:25:72.22:0,72,1255	0/0:36,0:36:99:0,105,1949	0/0:21,0:21:57.11:0,57,1023	0/0:28,0:28:84.27:0,84,1533	0/0:25,0:25:72.23:0,72,1306	0/0:24,0:24:72.23:0,72,1299	0/0:31,0:31:93.31:0,93,1698	0/0:24,0:24:72.25:0,72,1330	0/0:16,0:16:48.16:0,48,895	0/0:18,0:18:48.14:0,48,862	0/0:24,0:24:69.23:0,69,1235	0/0:21,0:21:63.22:0,63,1174	1/1:3,10:13:14.96:187,15,0	0/0:20,0:20:57.19:0,57,1050	0/0:40,0:40:99:0,114,2078	0/0:32,0:32:96.30:0,96,1726	0/0:24,0:24:72.23:0,72,1289	1/1:2,23:28:81.24:1281,81,0	1/1:7,17:24:60.07:865,60,0	1/1:0,6:6:18.06:294,18,0
chr10	7678552	.	C	CA	1388.94	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=12.313;DP=687;FS=15.475;HRun=0;HaplotypeScore=114.8144;InbreedingCoeff=0.9854;MQ=86.97;MQ0=0;MQRankSum=-11.811;QD=16.94;ReadPosRankSum=2.347;VQSLOD=5.1707;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:84.28:0,84,1173	0/0:8,0:8:21.07:0,21,294	0/0:28,0:28:72.76:0,73,1062	0/0:27,0:27:75.22:0,75,977	0/0:34,0:34:93.30:0,93,1276	0/0:32,0:31:93.29:0,93,1283	0/0:15,0:15:45.15:0,45,629	0/0:27,0:27:75.23:0,75,1005	0/0:22,0:22:66.21:0,66,906	0/0:37,0:37:99:0,111,1552	0/0:21,0:21:60.20:0,60,832	0/0:28,0:28:84.28:0,84,1175	0/0:25,0:25:75.24:0,75,1031	0/0:25,0:25:75.25:0,75,1047	0/0:29,0:29:87.29:0,87,1212	0/0:25,0:25:72.24:0,72,1007	0/0:16,0:16:48.16:0,48,671	0/0:19,0:19:48.16:0,48,668	0/0:21,0:21:60.20:0,60,839	0/0:22,0:22:66.22:0,66,920	1/1:5,10:15:10.61:101,11,0	0/0:20,0:20:54.17:0,54,737	0/0:40,0:40:99:0,114,1593	0/0:31,0:31:93.31:0,93,1301	0/0:23,0:23:69.19:0,69,914	1/1:9,24:33:31.29:731,31,0	1/1:8,18:26:25.45:525,25,0	1/1:2,6:8:21.01:188,21,0
chr10	7679013	.	G	GAAAAAAAAAA	15365.23	PASS	AB=0.932;AC=28;AF=0.778;AN=36;BaseQRankSum=1.426;DP=298;FS=16.282;HRun=7;HaplotypeScore=145.4365;InbreedingCoeff=0.3134;MQ=45.41;MQ0=10;MQRankSum=-5.946;QD=56.49;ReadPosRankSum=-0.265;VQSLOD=1.1220;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:23:50.19:1497,50,0	1/1:3,0:6:9.03:349,9,0	0/0:16,0:11:19.02:0,19,696	0/0:8,0:5:8.90:0,9,190	./.	1/1:15,6:23:39.13:1880,39,0	1/1:4,0:4:3.01:103,3,0	./.	0/1:13,0:12:16.09:575,0,16	./.	./.	1/1:16,0:19:30.10:1296,30,0	1/1:12,9:20:3.24:706,3,0	1/1:15,5:24:33.11:1320,33,0	./.	0/1:2,0:2:11.82:21,0,12	1/1:13,0:20:18.53:662,19,0	./.	0/1:16,0:15:6.60:831,0,7	1/1:22,0:21:42.14:1347,42,0	./.	1/1:14,1:20:36.12:1435,36,0	1/1:14,1:21:36.12:1547,36,0	0/1:5,0:6:2.78:529,0,3	1/1:11,0:15:28.65:1267,29,0	./.	./.	./.
chr10	7683353	.	A	AACACACACACAC	10360.88	PASS	AB=1.000;AC=49;AF=0.907;AN=54;BaseQRankSum=1.122;DP=463;FS=4.967;HRun=0;HaplotypeScore=197.4175;InbreedingCoeff=0.4572;MQ=65.62;MQ0=7;MQRankSum=-1.749;QD=27.19;ReadPosRankSum=0.575;VQSLOD=4.0362;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:12,0:12:15.05:530,15,0	1/1:6,0:6:12.04:362,12,0	0/0:35,0:25:13.90:0,14,311	0/0:32,0:24:18.05:0,18,380	1/1:11,0:11:6.02:232,6,0	1/1:28,0:27:12.02:347,12,0	1/1:14,0:14:6.02:221,6,0	1/1:27,0:27:48.11:1426,48,0	1/1:14,0:14:10.58:115,11,0	1/1:12,0:12:21.07:1015,21,0	1/1:7,7:16:11.93:428,12,0	1/1:17,0:16:11.93:477,12,0	1/1:16,0:15:5.91:224,6,0	1/1:16,0:16:8.66:246,9,0	0/1:15,0:15:35.58:114,0,36	1/1:13,0:11:9.03:213,9,0	1/1:7,0:7:2.87:101,3,0	1/1:13,0:13:12.04:442,12,0	1/1:15,0:15:18.53:648,19,0	./.	1/1:9,0:13:3.01:103,3,0	1/1:22,6:28:9.18:345,9,0	1/1:7,4:12:9.03:293,9,0	1/1:14,0:14:6.43:45,6,0	1/1:19,0:19:21.34:456,21,0	1/1:14,0:13:24.08:715,24,0	1/1:21,0:21:42.01:984,42,0	1/1:6,0:6:15.02:280,15,0
chr10	7683374	.	A	ACACACAC	4033.47	PASS	AB=0.968;AC=38;AF=0.704;AN=54;BaseQRankSum=3.330;DP=370;FS=19.246;HRun=0;HaplotypeScore=128.6344;InbreedingCoeff=-0.1262;MQ=38.84;MQ0=42;MQRankSum=-2.722;QD=14.83;ReadPosRankSum=3.899;VQSLOD=1.3749;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:9:15.05:276,15,0	1/1:5,0:5:12.93:301,13,0	0/0:39,0:10:19.92:0,20,327	0/0:45,0:16:20.45:0,20,336	1/1:8,0:7:4.96:104,5,0	1/1:15,0:11:6.54:118,7,0	0/1:7,0:5:4:49,0,4	0/1:24,0:24:99:161,0,597	0/1:7,0:7:0.46:40,0,0	0/1:11,0:10:99:151,0,238	1/1:15,0:15:8.77:179,9,0	1/1:16,0:14:9.66:179,10,0	0/1:9,0:8:12.82:114,0,13	1/1:11,0:11:1.79:74,2,0	1/1:6,0:6:2.29:54,2,0	0/1:8,0:8:61.51:74,0,62	0/1:7,0:7:9.43:9,0,92	0/1:8,0:8:87.96:138,0,88	0/1:11,0:10:99:226,0,111	./.	1/1:10,0:7:2.07:49,2,0	0/1:16,0:16:37.86:57,0,38	1/1:8,0:7:9.03:142,9,0	1/1:8,0:8:6.33:45,6,0	1/1:13,0:10:17.85:293,18,0	0/1:11,0:10:92.41:312,0,92	1/1:17,3:18:15.72:674,16,0	0/1:3,1:5:22.22:216,0,22
chr10	7683390	.	AGT	A	1202.37	PASS	AB=0.971;AC=35;AF=0.673;AN=52;BaseQRankSum=6.969;DP=372;FS=6.124;HRun=0;HaplotypeScore=106.7000;InbreedingCoeff=0.0400;MQ=30.88;MQ0=45;MQRankSum=0.507;QD=4.47;ReadPosRankSum=2.472;VQSLOD=2.3328;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:13:14.83:103,15,0	1/1:2,0:2:4.76:23,5,0	0/0:24,0:3:8.55:0,9,52	0/0:36,0:9:4.77:0,5,22	1/1:10,0:9:5.64:34,6,0	1/1:17,2:15:17.73:116,18,0	1/1:11,0:8:6.36:37,6,0	0/1:15,13:28:76.27:202,0,76	1/1:6,2:7:8.45:55,8,0	0/1:12,0:11:26.65:27,0,106	0/1:14,0:14:0.01:0,0,0	0/1:17,0:15:5.99:14,0,6	0/1:10,0:9:12.41:44,0,12	1/1:8,0:7:2.97:20,3,0	1/1:9,0:9:2.72:18,3,0	1/1:11,0:10:17.80:125,18,0	1/1:6,0:6:7.87:48,8,0	0/1:8,0:8:24.16:75,0,24	0/1:13,0:12:16.03:88,0,16	./.	0/1:12,0:8:0:0,0,0	0/0:18,0:17:2.63:0,3,20	./.	0/1:8,0:6:0:0,0,0	1/1:9,0:6:5.88:36,6,0	0/1:12,0:12:17.30:112,0,17	1/1:21,0:18:16.74:149,17,0	0/1:5,0:5:14.09:20,0,14
chr10	7684357	.	TA	T	2708.93	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=7.048;DP=556;FS=3.161;HRun=6;HaplotypeScore=56.8437;InbreedingCoeff=0.9842;MQ=78.70;MQ0=0;MQRankSum=-1.037;QD=26.05;ReadPosRankSum=-3.356;VQSLOD=2.5370;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:39.13:0,39,510	0/0:13,0:13:39.13:0,39,513	0/0:21,0:21:48.15:0,48,602	0/0:6,0:6:12.04:0,12,158	1/1:2,32:34:90.23:967,90,0	0/0:28,0:28:84.26:0,84,1092	0/0:14,0:14:36.11:0,36,460	1/1:3,27:30:78.19:838,78,0	0/0:16,0:16:48.14:0,48,616	0/0:33,0:33:99:0,99,1260	0/0:23,0:23:60.20:0,60,790	0/0:16,0:16:48.14:0,48,617	0/0:14,0:14:42.14:0,42,553	0/0:18,0:18:54.16:0,54,692	1/1:2,15:17:36.09:387,36,0	1/1:1,22:23:63.16:677,63,0	0/0:19,0:19:54.17:0,54,706	0/0:7,0:7:18.06:0,18,236	0/0:19,0:19:42.14:0,42,552	0/0:28,0:28:84.27:0,84,1103	0/0:8,0:8:24.08:0,24,316	0/0:28,0:28:75.23:0,75,968	0/0:30,0:30:87.28:0,87,1142	0/0:11,0:11:33.11:0,33,434	0/0:29,0:29:81.26:0,81,1066	0/0:19,0:19:57.18:0,57,746	0/0:33,0:33:99:0,99,1288	0/0:5,0:5:15.05:0,15,197
chr10	7686312	.	G	GT	2226.95	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-9.523;DP=621;FS=0.000;HRun=8;HaplotypeScore=86.7652;InbreedingCoeff=0.9836;MQ=78.25;MQ0=0;MQRankSum=-0.533;QD=23.69;ReadPosRankSum=-0.764;VQSLOD=3.6884;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,105,955	0/0:15,0:15:36.96:0,37,352	0/0:28,0:25:27.19:0,27,324	0/0:17,0:17:10.63:0,11,167	1/1:2,20:22:57.17:658,57,0	0/0:31,1:32:55.41:0,55,757	0/0:20,0:20:50.99:0,51,457	1/1:10,20:29:63.14:691,63,0	0/0:21,0:21:57:0,57,518	0/0:24,0:24:63.03:0,63,577	0/0:19,0:19:45.02:0,45,411	0/0:15,0:15:36.01:0,36,330	0/0:27,0:27:78.03:0,78,711	0/0:18,0:18:48.01:0,48,435	1/1:3,14:17:39.12:450,39,0	1/1:6,19:25:50.98:588,51,0	0/0:20,0:20:51.03:0,51,467	0/0:5,0:5:15.01:0,15,137	0/0:25,0:26:59.01:0,59,518	0/0:14,0:14:39.02:0,39,357	0/0:31,0:31:84.03:0,84,765	0/0:26,0:26:62.97:0,63,565	0/0:16,0:16:47.99:0,48,430	0/0:22,0:22:59.97:0,60,536	0/0:20,0:20:60.03:0,60,549	0/0:26,0:26:65.77:0,66,588	0/0:36,0:36:99:0,102,922	0/0:12,0:12:29.98:0,30,268
chr10	7686810	.	CT	C	2228.92	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=9.610;DP=609;FS=3.431;HRun=6;HaplotypeScore=58.2050;InbreedingCoeff=0.9894;MQ=85.65;MQ0=0;MQRankSum=-0.978;QD=24.49;ReadPosRankSum=-0.074;VQSLOD=3.2299;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:81.26:0,81,1064	0/0:6,0:6:18.05:0,18,222	0/0:21,0:21:47.42:0,47,678	0/0:21,0:20:47.96:0,48,563	0/0:27,0:27:75.23:0,75,970	0/0:24,0:24:66.20:0,66,846	0/0:15,0:15:42.13:0,42,537	0/0:33,0:33:84.27:0,84,1105	0/0:24,0:24:69.19:0,69,888	0/0:29,0:28:69.22:0,69,895	0/0:26,0:26:75.24:0,75,986	0/0:19,0:19:54.15:0,54,681	0/0:29,0:29:84.27:0,84,1103	0/0:24,0:24:72.23:0,72,947	0/0:19,0:19:54.18:0,54,710	0/0:30,0:30:75.22:0,75,959	0/0:15,0:15:45.15:0,45,592	0/0:7,0:7:21.05:0,21,261	0/0:19,0:19:51.17:0,51,671	0/0:24,0:24:69.22:0,69,895	1/1:1,26:27:69.17:742,69,0	0/0:21,0:21:57.19:0,57,749	0/0:19,0:19:51.17:0,51,670	0/0:19,0:19:57.12:0,57,702	0/0:18,0:18:48.15:0,48,617	1/1:6,30:36:17.25:872,17,0	1/1:2,21:23:57.14:612,57,0	1/1:0,5:5:15.04:161,15,0
chr10	7687362	.	G	GAACACACAAACA	2333.52	PASS	AB=0.992;AC=23;AF=0.411;AN=56;BaseQRankSum=-6.435;DP=448;FS=6.831;HRun=0;HaplotypeScore=156.7778;InbreedingCoeff=0.3616;MQ=67.66;MQ0=7;MQRankSum=-2.024;QD=9.41;ReadPosRankSum=-2.074;VQSLOD=1.0979;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:32,0:32:15.69:181,0,16	1/1:7,0:7:8.89:52,9,0	0/0:26,0:15:5.11:0,5,323	0/0:23,0:12:28.69:0,29,437	0/1:28,0:28:99:114,0,471	1/1:19,0:19:3.01:164,3,0	1/1:15,0:15:5.97:46,6,0	0/1:26,0:25:67.45:67,0,190	1/1:11,0:13:18.02:264,18,0	0/0:14,0:13:18.65:0,19,277	0/1:14,0:14:75.55:76,0,80	0/1:11,0:11:10.94:11,0,62	0/0:7,0:7:9.03:0,9,136	0/0:15,0:15:18.06:0,18,282	0/0:16,0:16:15.94:0,16,345	0/0:15,0:15:13.07:0,13,432	1/1:10,5:19:11.95:294,12,0	0/1:11,0:10:25.91:39,0,26	1/1:16,0:15:13.26:357,13,0	1/1:13,0:13:17.83:298,18,0	0/0:15,0:14:14.94:0,15,260	0/1:15,0:16:67.10:67,0,264	0/0:16,0:16:13.87:0,14,214	0/0:15,0:15:12.04:0,12,146	1/1:8,0:8:9.50:492,10,0	0/0:18,0:18:30.49:0,30,713	0/0:18,0:18:19.68:0,20,920	0/0:2,0:2:0.89:0,1,2
chr10	7687363	.	A	AACACACAAACAC	4759.24	PASS	AB=0.952;AC=31;AF=0.554;AN=56;BaseQRankSum=-8.205;DP=469;FS=0.471;HRun=0;HaplotypeScore=165.7193;InbreedingCoeff=0.0834;MQ=65.44;MQ0=7;MQRankSum=-1.727;QD=12.59;ReadPosRankSum=-2.036;VQSLOD=3.2394;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:33,0:33:30.29:404,30,0	1/1:7,0:7:18.01:173,18,0	0/1:25,0:14:2.22:2,0,169	0/0:23,0:12:22.93:0,23,253	0/1:27,0:27:99:293,0,395	1/1:8,14:24:7.90:345,8,0	1/1:16,0:16:8.99:228,9,0	0/1:25,0:24:99:314,0,142	1/1:14,0:14:18.01:305,18,0	0/1:14,0:13:63.41:63,0,153	0/1:15,0:16:46.51:92,0,47	0/1:11,0:11:11.01:11,0,34	0/0:5,0:7:9.01:0,9,103	0/0:13,0:14:17.93:0,18,198	0/0:16,0:16:15.94:0,16,295	0/1:15,0:15:75.87:76,0,332	0/1:14,1:15:2.10:224,0,2	1/1:11,0:10:3.43:117,3,0	1/1:17,0:15:23.66:505,24,0	1/1:16,1:17:36.01:717,36,0	0/0:15,0:14:11.50:0,12,193	0/1:16,0:17:67.13:67,0,238	0/1:16,0:17:2.52:3,0,118	0/0:16,0:16:11.89:0,12,85	0/1:5,7:14:4.23:707,0,4	0/1:19,0:19:55.18:55,0,511	0/1:20,0:20:40.06:40,0,738	1/1:3,0:3:2.92:17,3,0
chr10	7687365	.	C	CACACAA	4322.28	PASS	AB=1.000;AC=34;AF=0.607;AN=56;BaseQRankSum=-3.154;DP=477;FS=3.057;HRun=0;HaplotypeScore=129.9209;InbreedingCoeff=-0.1431;MQ=64.64;MQ0=10;MQRankSum=-1.115;QD=10.29;ReadPosRankSum=-0.182;VQSLOD=3.7362;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:35,0:35:42.87:507,43,0	0/1:7,0:7:3.97:127,0,4	0/1:24,0:13:2.18:2,0,169	0/0:23,0:12:22.93:0,23,253	0/1:27,0:27:99:298,0,107	1/1:25,0:24:8.01:170,8,0	1/1:16,0:16:8.93:132,9,0	0/1:23,0:21:58.95:317,0,59	1/1:7,8:15:11.07:411,11,0	0/1:13,0:12:4.33:230,0,4	1/1:15,0:15:20.19:174,20,0	1/1:11,0:11:8.96:70,9,0	0/1:7,0:7:4.33:13,0,4	0/1:15,0:15:27.59:58,0,28	0/0:18,0:18:6.55:0,7,126	0/1:14,0:13:83.76:84,0,97	0/1:14,0:14:2.10:127,0,2	1/1:11,0:10:22.41:159,22,0	0/1:17,0:15:4.13:342,0,4	1/1:22,0:22:12.76:423,13,0	0/0:16,0:15:2.18:0,2,36	0/1:18,0:18:99:133,0,111	0/1:17,0:16:11.45:79,0,11	1/1:15,0:15:11.86:83,12,0	0/1:14,0:14:16.90:318,0,17	0/1:20,0:20:20.59:21,0,264	0/1:22,0:21:36.50:37,0,222	0/1:3,0:3:8.09:8,0,28
chr10	7687367	.	C	CACAA	4766.68	PASS	AB=0.982;AC=36;AF=0.643;AN=56;BaseQRankSum=-1.854;DP=468;FS=1.589;HRun=0;HaplotypeScore=120.2287;InbreedingCoeff=-0.3331;MQ=63.33;MQ0=10;MQRankSum=-0.545;QD=10.66;ReadPosRankSum=1.062;VQSLOD=4.5189;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:32,2:34:10.51:499,11,0	0/1:7,0:7:4.03:127,0,4	0/1:24,0:13:1.37:1,0,169	0/0:21,0:10:22.93:0,23,253	0/1:27,0:27:16.75:328,0,17	0/1:23,0:22:13:108,0,13	1/1:3,11:14:8.93:104,9,0	0/1:23,0:21:45.81:314,0,46	0/1:14,0:14:31.84:234,0,32	1/1:13,0:12:25.01:381,25,0	1/1:12,0:12:23.87:261,24,0	1/1:13,0:13:8.67:111,9,0	1/1:8,0:8:8.63:70,9,0	0/1:15,0:15:38.63:163,0,39	0/1:19,0:19:17.61:18,0,75	0/1:13,0:12:33.93:120,0,34	0/1:12,0:12:2.10:101,0,2	1/1:12,0:11:25.13:202,25,0	0/1:9,7:15:62.13:289,0,62	0/1:22,0:22:50.44:343,0,50	0/1:16,0:15:8.93:29,0,9	0/1:18,0:18:68.72:196,0,69	1/1:18,0:17:5.62:193,6,0	1/1:15,0:15:12.04:171,12,0	0/1:13,0:13:57.97:211,0,58	0/1:20,0:20:70.40:70,0,144	0/1:22,0:21:99:113,0,104	0/1:3,0:3:8.16:8,0,25
chr10	7687369	.	C	CAA	5532.45	PASS	AB=0.918;AC=40;AF=0.714;AN=56;BaseQRankSum=0.109;DP=461;FS=6.612;HRun=1;HaplotypeScore=96.7492;InbreedingCoeff=-0.0193;MQ=60.50;MQ0=11;MQRankSum=-0.019;QD=13.20;ReadPosRankSum=4.420;VQSLOD=2.0445;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:31,2:34:3.97:441,4,0	0/1:7,0:7:4.03:127,0,4	0/0:20,0:10:9.91:0,10,179	0/0:21,0:10:22.93:0,23,253	1/1:24,1:25:41.22:411,41,0	0/1:21,0:20:18.95:26,0,19	0/1:12,0:12:2.90:15,0,3	1/1:22,0:19:43.54:379,44,0	0/1:14,0:14:37.22:145,0,37	1/1:4,10:14:32.54:404,33,0	1/1:3,9:12:23.91:280,24,0	1/1:3,11:14:9.46:134,9,0	1/1:4,3:8:9.48:111,9,0	1/1:4,10:15:17.73:271,18,0	0/1:7,12:19:36.40:90,0,36	1/1:10,3:12:28.86:278,29,0	0/1:12,0:12:2.10:75,0,2	1/1:12,1:12:7.07:216,7,0	0/1:16,0:14:81.64:198,0,82	0/1:22,1:23:75.86:245,0,76	1/1:4,12:16:7.73:138,8,0	0/1:5,13:18:11.78:240,0,12	1/1:5,13:17:17.08:269,17,0	1/1:1,13:15:12.04:228,12,0	0/1:13,0:13:65.30:78,0,65	0/1:16,3:19:3.71:287,0,4	1/1:17,4:20:14.08:420,14,0	0/1:3,0:3:1.77:23,0,2
chr10	7687399	.	C	CAGAG	714.27	PASS	AB=0.943;AC=11;AF=0.196;AN=56;BaseQRankSum=5.319;DP=493;FS=5.927;HRun=0;HaplotypeScore=138.3740;InbreedingCoeff=0.1023;MQ=55.94;MQ0=24;MQRankSum=-3.952;QD=3.84;ReadPosRankSum=1.310;VQSLOD=2.1521;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:33:51.53:52,0,89	0/0:5,0:5:11.36:0,11,104	0/0:23,0:5:6.49:0,6,101	0/1:19,0:13:7.50:8,0,375	0/1:10,14:24:15.08:87,0,15	0/0:16,0:15:2.20:0,2,179	0/0:8,0:8:11.15:0,11,194	0/1:24,0:21:77.29:273,0,77	0/1:19,0:19:17.23:17,0,353	0/0:14,0:14:37.47:0,37,571	0/0:12,0:12:18.43:0,18,224	0/0:14,0:14:12.47:0,12,145	0/0:13,0:13:30.14:0,30,362	0/0:14,0:14:20.82:0,21,219	1/1:16,0:16:5.95:234,6,0	1/1:11,0:10:3.76:167,4,0	0/1:19,0:19:4.14:4,0,277	0/0:12,0:10:20.84:0,21,243	0/0:22,0:19:12.31:0,12,643	0/0:22,0:22:11.14:0,11,326	0/0:22,0:19:29.46:0,29,251	0/0:17,0:17:26.04:0,26,390	0/0:20,0:19:32.94:0,33,361	0/0:14,0:14:26.92:0,27,307	0/1:20,0:20:14.23:14,0,443	0/0:29,0:29:86.55:0,87,921	0/0:25,0:24:57.76:0,58,594	0/0:5,0:5:14.98:0,15,142
chr10	7687501	.	G	GAA	4671.12	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-6.176;DP=368;FS=18.183;HRun=10;HaplotypeScore=49.9353;InbreedingCoeff=0.9762;MQ=76.44;MQ0=1;MQRankSum=-0.255;QD=32.44;ReadPosRankSum=-0.073;VQSLOD=3.4479;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:82.88:0,83,852	0/0:13,0:14:41.83:0,42,409	0/0:9,0:8:11.47:0,11,101	0/0:13,0:12:27.02:0,27,270	0/0:16,0:16:39.07:0,39,397	0/0:17,0:18:40.16:0,40,451	0/0:6,0:6:11.98:0,12,122	0/0:23,0:23:57.09:0,57,579	0/0:13,0:13:30.01:0,30,305	1/1:4,15:19:42.14:617,42,0	1/1:3,10:15:30.09:431,30,0	1/1:1,6:8:21.07:314,21,0	1/1:3,5:8:12.04:179,12,0	1/1:2,6:9:18.06:252,18,0	0/0:6,0:6:15.03:0,15,152	0/0:11,0:11:33.07:0,33,335	0/0:14,0:14:33.06:0,33,335	1/1:2,5:7:20.53:255,21,0	0/0:14,0:14:30:0,30,305	0/0:14,0:14:33.06:0,33,336	1/1:1,4:6:14.54:188,15,0	1/1:1,7:8:18.06:260,18,0	1/1:4,6:10:18.06:268,18,0	1/1:1,8:9:24.08:358,24,0	0/0:16,0:16:39.07:0,39,397	1/1:1,15:17:45.10:626,45,0	1/1:5,14:19:45.11:647,45,0	1/1:2,6:9:20.56:277,21,0
chr10	7687872	.	CA	C	2117.95	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=1.710;DP=336;FS=8.120;HRun=6;HaplotypeScore=47.1245;InbreedingCoeff=0.9277;MQ=65.14;MQ0=0;MQRankSum=1.095;QD=22.77;ReadPosRankSum=3.649;VQSLOD=2.6327;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:11:24.08:0,24,310	1/1:1,5:6:15.04:161,15,0	0/0:7,0:7:15.05:0,15,197	0/0:3,0:2:5.38:0,5,47	0/0:32,0:32:63.16:0,63,797	1/1:2,12:14:30.07:322,30,0	1/1:1,6:7:18.04:193,18,0	0/0:26,0:26:75.24:0,75,973	1/1:1,9:10:18.04:193,18,0	0/0:24,0:23:57.19:0,57,750	0/0:18,0:18:39.08:0,39,493	0/0:8,0:8:24.08:0,24,316	0/0:11,0:11:30.08:0,30,379	0/0:8,0:8:21.07:0,21,276	0/0:8,0:8:24.08:0,24,316	0/0:11,0:11:27.09:0,27,355	1/1:0,16:16:45.11:484,45,0	0/0:13,0:13:33.11:0,33,434	1/1:2,12:14:36.09:387,36,0	1/1:2,13:15:33.08:355,33,0	0/0:5,0:5:9.03:0,9,118	0/0:3,0:3:9.03:0,9,118	0/0:5,0:5:12.04:0,12,158	0/0:4,0:4:5.98:0,6,59	1/1:2,9:11:21.05:226,21,0	0/0:21,0:21:60.17:0,60,761	0/0:17,0:17:42.14:0,42,552	0/0:7,0:7:18.06:0,18,237
chr10	7687884	.	GAT	G	1834.60	PASS	AB=1.000;AC=19;AF=0.352;AN=54;BaseQRankSum=6.822;DP=312;FS=10.232;HRun=0;HaplotypeScore=52.9790;InbreedingCoeff=0.8138;MQ=61.84;MQ0=1;MQRankSum=-0.822;QD=23.52;ReadPosRankSum=1.507;VQSLOD=3.4721;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:11:6:0,6,53	0/0:5,0:5:15.05:0,15,255	./.	0/1:6,0:4:7.10:7,0,16	0/0:31,0:31:51.17:0,51,860	0/0:12,0:12:33.08:0,33,508	0/0:7,0:7:18.06:0,18,296	0/0:35,0:35:90.31:0,90,1522	0/0:7,0:7:18.06:0,18,302	1/1:14,4:17:51.13:631,51,0	1/1:9,3:12:23.81:265,24,0	1/1:5,4:9:24.01:271,24,0	1/1:6,4:10:23.96:265,24,0	1/1:6,0:6:9.03:116,9,0	0/0:10,0:10:27.08:0,27,433	0/0:8,0:8:18.06:0,18,306	0/0:22,0:22:51.17:0,51,861	1/1:7,3:10:24.02:277,24,0	0/0:12,0:12:27.09:0,27,460	0/0:12,0:12:27.09:0,27,459	0/0:3,0:3:6.02:0,6,102	1/1:2,1:3:8.99:98,9,0	1/1:3,0:3:6.01:63,6,0	1/1:1,0:1:3.01:39,3,0	0/0:13,0:13:30.10:0,30,510	0/0:19,0:19:6.38:0,6,676	0/0:14,0:14:39.13:0,39,655	0/0:9,0:9:18.06:0,18,306
chr10	7687906	.	C	CAT	1917.35	PASS	AB=0.923;AC=21;AF=0.389;AN=54;BaseQRankSum=7.469;DP=338;FS=12.681;HRun=0;HaplotypeScore=56.5834;InbreedingCoeff=0.7378;MQ=62.70;MQ0=2;MQRankSum=0.682;QD=19.56;ReadPosRankSum=2.363;VQSLOD=2.3244;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:16:3:27,3,0	0/0:6,0:6:9.03:0,9,116	./.	0/0:12,0:8:5.26:0,5,32	0/0:29,0:29:48.15:0,48,604	0/1:11,1:12:17.49:17,0,324	0/0:4,0:4:9.03:0,9,116	0/0:42,0:42:99:0,102,1241	0/0:10,0:10:24.08:0,24,307	1/1:16,1:16:42.13:622,42,0	1/1:14,1:15:27.06:378,27,0	1/1:6,2:8:18.05:259,18,0	1/1:7,2:9:18.05:257,18,0	1/1:4,2:6:12.04:187,12,0	0/0:12,0:11:27.09:0,27,346	0/0:7,0:7:18.06:0,18,231	0/0:23,0:23:45.15:0,45,578	1/1:7,1:8:12.04:186,12,0	0/0:13,0:13:39.10:0,39,473	0/0:12,0:12:30.10:0,30,383	0/0:2,0:2:3.01:0,3,39	1/1:4,0:4:6.02:82,6,0	1/1:1,0:1:3.01:50,3,0	1/1:1,0:1:3.01:46,3,0	0/0:15,0:15:33.08:0,33,390	0/0:20,0:20:6.81:0,7,631	0/0:19,0:19:45.15:0,45,577	0/0:11,0:11:15.05:0,15,193
chr10	7688597	.	G	GA	2560.99	PASS	AC=14;AF=0.350;AN=40;BaseQRankSum=-9.317;DP=462;FS=9.339;HRun=0;HaplotypeScore=62.6614;InbreedingCoeff=0.8827;MQ=22.96;MQ0=168;MQRankSum=6.445;QD=14.07;ReadPosRankSum=-1.103;VQSLOD=4.3164;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:70,0:23:36.12:0,36,503	1/1:3,13:10:21.07:335,21,0	./.	./.	0/0:11,0:9:5.87:0,6,84	1/1:8,14:9:24.08:383,24,0	./.	./.	1/1:16,21:15:36.12:575,36,0	0/0:17,0:9:21.07:0,21,293	0/0:6,0:5:15.05:0,15,208	0/0:17,0:7:18.06:0,18,251	0/0:16,0:5:8.99:0,9,104	0/0:8,0:3:9.03:0,9,126	./.	./.	1/1:18,11:8:15.05:239,15,0	0/0:9,0:1:3.01:0,3,42	1/1:15,13:7:21.07:336,21,0	1/1:8,20:14:27.09:431,27,0	./.	0/0:7,0:6:12.04:0,12,167	0/0:6,0:4:9.03:0,9,126	./.	1/1:3,19:15:26.85:431,27,0	0/0:19,0:13:36.12:0,36,487	0/0:20,0:17:39.13:0,39,544	0/0:8,0:4:12.04:0,12,168
chr10	7688623	.	G	GA	1923.48	PASS	AB=0.714;AC=25;AF=0.568;AN=44;BaseQRankSum=8.220;DP=536;FS=3.831;HRun=2;HaplotypeScore=49.7848;InbreedingCoeff=0.7159;MQ=18.10;MQ0=215;MQRankSum=-3.923;QD=10.87;ReadPosRankSum=3.755;VQSLOD=2.0572;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:96,0:21:27.08:0,27,332	0/0:15,0:6:12.04:0,12,149	./.	./.	1/1:1,9:8:6.02:86,6,0	0/0:20,0:5:12.02:0,12,136	0/0:14,0:5:3.01:0,3,37	1/1:10,1:2:3.01:43,3,0	0/0:41,0:13:21.06:0,21,259	1/1:7,10:11:24.08:345,24,0	1/1:2,4:5:9.03:129,9,0	1/1:10,4:4:9.03:129,9,0	1/1:14,8:7:9.03:129,9,0	./.	./.	1/1:8,3:4:6.02:86,6,0	0/0:45,0:10:24.08:0,24,297	1/1:19,1:1:3.01:43,3,0	0/0:25,0:6:15.05:0,15,186	0/0:31,0:13:15.05:0,15,186	./.	1/1:2,8:8:15.05:215,15,0	1/1:2,5:5:9.03:129,9,0	./.	0/0:28,0:13:18.06:0,18,223	1/1:13,7:11:18.06:259,18,0	1/1:7,12:13:24.08:345,24,0	0/1:6,4:5:22.07:158,0,22
chr10	7688789	.	TGTG	T	2993.95	PASS	AB=0.831;AC=24;AF=0.462;AN=52;BaseQRankSum=9.952;DP=656;FS=0.000;HRun=0;HaplotypeScore=58.0737;InbreedingCoeff=0.7296;MQ=26.27;MQ0=213;MQRankSum=-7.573;QD=12.37;ReadPosRankSum=-0.792;VQSLOD=2.9948;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:77,0:28:48.12:0,48,1024	0/0:11,0:9:21.07:0,21,484	./.	./.	0/0:15,0:9:27.09:0,27,607	0/0:25,0:15:24.08:0,24,552	0/0:25,0:8:24.08:0,24,491	0/0:22,0:6:12.04:0,12,276	0/0:44,0:25:51.17:0,51,1114	1/1:4,17:14:42.14:715,42,0	1/1:5,6:5:6.02:102,6,0	1/1:13,13:12:15.05:255,15,0	1/1:8,6:4:9.03:153,9,0	1/1:6,10:8:3.01:51,3,0	0/0:32,0:22:60.21:0,60,1343	0/0:25,0:17:42.10:0,42,827	0/0:54,0:19:45.15:0,45,1036	0/1:26,5:6:99:138,0,123	0/0:17,0:9:27.09:0,27,622	0/0:38,0:27:66.23:0,66,1519	1/1:11,3:3:6.02:102,6,0	1/1:2,11:11:12.04:204,12,0	1/1:7,12:11:27.09:460,27,0	1/1:27,2:2:3.01:51,3,0	0/0:29,0:17:41.98:0,42,937	1/1:5,16:15:39.13:665,39,0	1/1:3,4:3:9.03:153,9,0	0/1:15,5:6:56.99:141,0,57
chr10	7690110	.	TA	T	9635.37	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=13.473;DP=575;FS=7.792;HRun=8;HaplotypeScore=58.1448;InbreedingCoeff=0.9942;MQ=70.78;MQ0=0;MQRankSum=0.922;QD=25.63;ReadPosRankSum=2.967;VQSLOD=5.6187;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:12,1:13:17.53:0,18,368	0/0:8,0:8:24.07:0,24,289	0/0:14,0:14:30.07:0,30,349	0/0:9,0:10:15.52:0,16,182	1/1:5,26:31:75.11:724,75,0	0/0:27,0:27:78.22:0,78,929	0/0:14,0:14:42.13:0,42,507	1/1:2,18:20:54.05:510,54,0	0/0:22,0:22:60.18:0,60,725	1/1:1,29:30:87.09:828,87,0	1/1:0,22:22:63.10:608,63,0	1/1:1,12:13:36.06:348,36,0	1/1:1,22:23:63.10:608,63,0	1/1:2,18:20:54.09:522,54,0	1/1:2,17:19:48.07:464,48,0	1/1:1,18:19:48.03:464,48,0	0/0:8,0:8:24.07:0,24,290	1/1:1,14:15:42.07:406,42,0	0/0:22,0:22:63.01:0,63,728	0/0:39,0:39:99:0,108,1305	1/1:0,16:16:45.07:435,45,0	1/1:3,26:29:75.04:712,75,0	1/1:2,28:30:78.12:753,78,0	1/1:1,7:8:21.03:203,21,0	0/0:22,0:22:63.19:0,63,761	1/1:4,34:38:99:980,102,0	1/1:0,33:33:92.98:898,93,0	1/1:1,9:10:18.03:174,18,0
chr10	7690853	.	AT	A	1595.40	PASS	AB=0.886;AC=17;AF=0.304;AN=56;BaseQRankSum=6.150;DP=587;FS=6.437;HRun=3;HaplotypeScore=193.0659;InbreedingCoeff=-0.1219;MQ=59.06;MQ0=1;MQRankSum=-3.476;QD=4.85;ReadPosRankSum=0.891;VQSLOD=0.1202;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:12:2.98:0,3,22	0/0:12,0:12:33.01:0,33,369	0/0:22,0:10:29.76:0,30,367	0/0:14,0:10:8.45:0,8,214	0/0:38,1:39:29.10:0,29,133	0/0:26,0:26:75.03:0,75,904	0/0:13,0:12:25.26:0,25,244	0/1:26,1:27:50.20:50,0,135	0/0:13,0:13:35.93:0,36,380	0/1:24,5:29:58.28:192,0,58	0/1:26,5:31:17.34:209,0,17	1/1:16,3:19:1.81:90,2,0	0/1:10,1:11:13.75:46,0,14	0/1:14,4:18:79.93:127,0,80	0/0:20,0:20:19.16:0,19,64	0/1:23,2:25:62.14:62,0,68	0/0:11,0:11:8.70:0,9,240	0/1:8,1:8:21.76:47,0,22	0/0:18,0:18:46.91:0,47,570	0/0:35,0:35:99:0,102,1278	0/1:11,1:12:3.66:76,0,4	0/1:16,2:18:31.48:58,0,31	0/1:24,2:26:55.26:64,0,55	0/1:7,2:9:13.38:29,0,13	0/0:22,0:22:66.04:0,66,817	0/1:15,5:20:16.01:200,0,16	0/1:29,3:32:38.07:172,0,38	1/1:42,1:42:41.84:337,42,0
chr10	7690854	.	T	TC	4654.28	PASS	AB=0.883;AC=31;AF=0.554;AN=56;BaseQRankSum=5.746;DP=590;FS=9.320;HRun=0;HaplotypeScore=184.8860;InbreedingCoeff=0.7624;MQ=59.14;MQ0=1;MQRankSum=1.241;QD=11.96;ReadPosRankSum=5.464;VQSLOD=4.6556;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:12:2.87:0,3,15	0/0:12,0:12:35.89:0,36,398	0/0:22,0:10:29.37:0,29,333	0/0:13,0:9:17.99:0,18,229	0/1:31,8:39:9.82:90,0,10	0/0:26,0:26:77.53:0,78,902	0/0:13,0:12:25.39:0,25,239	0/1:27,0:27:11.01:148,0,11	0/0:13,0:13:38.54:0,39,392	1/1:19,11:30:63.84:548,64,0	1/1:19,12:31:45.22:484,45,0	1/1:8,10:18:26.89:258,27,0	1/1:8,4:12:24.05:166,24,0	1/1:14,4:18:27.45:171,27,0	1/1:16,4:20:9.74:78,10,0	1/1:18,7:25:46.51:287,47,0	0/0:13,0:13:27.39:0,27,291	0/1:7,2:8:10.17:28,0,10	0/0:18,0:18:47.53:0,48,576	0/0:35,0:35:99:0,105,1268	1/1:9,3:12:26.49:196,26,0	1/1:12,5:17:23.53:184,24,0	1/1:22,5:27:33.04:326,33,0	1/1:7,2:9:11.51:59,12,0	0/0:23,0:23:65.66:0,66,815	1/1:16,4:20:45.33:307,45,0	1/1:25,7:32:59.87:419,60,0	1/1:21,22:42:99:907,106,0
chr10	7690855	.	T	TAC	8477.75	PASS	AB=0.826;AC=32;AF=0.571;AN=56;BaseQRankSum=5.055;DP=594;FS=6.792;HRun=0;HaplotypeScore=181.4732;InbreedingCoeff=0.8554;MQ=58.87;MQ0=1;MQRankSum=0.868;QD=21.57;ReadPosRankSum=4.252;VQSLOD=5.0300;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:12:3:0,3,25	0/0:12,0:12:31.87:0,32,331	0/0:22,0:10:29.83:0,30,412	0/0:13,0:9:18.03:0,18,268	0/1:32,0:40:3.25:243,0,3	0/0:26,0:26:74.16:0,74,910	0/0:13,0:12:25.68:0,26,279	1/1:32,0:32:22.97:392,23,0	0/0:12,0:12:30.41:0,30,322	1/1:19,11:30:81.56:991,82,0	1/1:20,12:32:60.75:824,61,0	1/1:8,10:18:38.19:429,38,0	1/1:8,4:12:32.82:354,33,0	1/1:14,4:18:22.42:332,22,0	1/1:17,0:21:27.77:170,28,0	1/1:18,7:25:44.85:537,45,0	0/0:13,0:13:33.71:0,34,368	0/1:7,2:8:9.49:97,0,9	0/0:18,0:18:25.84:0,26,542	0/0:35,0:35:98.01:0,98,1259	1/1:9,3:12:35.72:360,36,0	1/1:12,5:17:42.82:377,43,0	1/1:21,5:27:52.24:605,52,0	1/1:7,2:9:17.67:138,18,0	0/0:24,0:24:40.24:0,40,789	1/1:15,4:19:56.26:556,56,0	1/1:23,7:30:37.22:684,37,0	1/1:20,22:41:99:1387,119,0
chr10	7690857	.	AT	A	6329.20	PASS	AB=0.682;AC=21;AF=0.375;AN=56;BaseQRankSum=-1.419;DP=603;FS=20.844;HRun=3;HaplotypeScore=177.0392;InbreedingCoeff=0.0072;MQ=58.78;MQ0=1;MQRankSum=0.859;QD=15.82;ReadPosRankSum=2.610;VQSLOD=3.1417;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:13:9.03:0,9,113	0/0:12,0:12:33.08:0,33,408	0/0:22,0:10:26.83:0,27,374	0/0:13,0:9:1.02:0,1,233	0/1:20,22:42:99:524,0,157	0/0:26,0:26:75.21:0,75,1017	0/0:14,0:13:23.69:0,24,319	0/1:16,19:35:99:724,0,302	0/0:11,0:11:33.08:0,33,404	0/1:19,12:31:99:367,0,190	0/1:20,12:32:65.22:364,0,65	0/1:14,4:18:4.26:131,0,4	0/1:6,6:12:17.78:202,0,18	0/1:13,6:19:79.90:272,0,80	0/1:10,11:21:99:262,0,109	1/1:9,15:24:15.46:504,15,0	0/0:13,0:13:27.02:0,27,376	0/1:4,5:8:20.85:161,0,21	0/0:18,0:18:51.62:0,52,691	0/0:34,0:34:99:0,102,1396	0/1:6,8:14:19.74:225,0,20	0/1:8,10:18:33.50:337,0,33	1/1:9,17:26:10.97:583,11,0	1/1:4,5:9:1.63:153,2,0	0/0:26,0:26:78.20:0,78,1027	0/1:9,10:19:10.27:369,0,10	0/1:12,17:29:1.03:544,0,1	1/1:24,18:41:28.66:605,29,0
chr10	7690901	.	A	ATC	1370.26	PASS	AB=0.895;AC=11;AF=0.196;AN=56;BaseQRankSum=5.568;DP=645;FS=0.977;HRun=0;HaplotypeScore=171.2483;InbreedingCoeff=-0.2263;MQ=63.55;MQ0=2;MQRankSum=-0.576;QD=5.91;ReadPosRankSum=-2.353;VQSLOD=2.7900;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:10:6.49:0,6,90	0/1:6,6:12:70.25:188,0,70	0/0:12,0:11:30.03:0,30,372	0/0:10,0:9:23.93:0,24,342	0/1:48,0:48:5.37:5,0,995	0/1:13,2:15:50.17:260,0,50	0/1:16,0:15:44.86:45,0,95	0/0:50,0:50:99:0,106,1860	0/1:10,4:14:99:175,0,101	0/0:38,0:38:99:0,108,1365	0/0:38,0:38:76.45:0,76,1210	0/0:24,0:24:59.83:0,60,766	0/0:24,0:23:56.92:0,57,763	0/0:24,0:24:69.21:0,69,974	0/0:22,0:22:33.55:0,34,484	0/0:24,0:24:63.07:0,63,778	0/1:15,1:15:6.85:7,0,174	0/1:8,1:8:63.45:63,0,232	0/1:17,2:19:99:222,0,153	0/1:32,4:36:99:361,0,323	0/1:19,0:19:0.62:1,0,499	0/0:11,0:11:27.06:0,27,334	0/0:26,0:26:46.42:0,46,832	0/0:10,1:11:24.08:0,24,348	0/1:24,4:28:99:181,0,299	0/0:21,0:21:39.61:0,40,771	0/0:32,0:31:37.43:0,37,1063	0/0:35,0:35:34.18:0,34,799
chr10	7690903	.	A	ATC	968.02	PASS	AB=0.884;AC=8;AF=0.143;AN=56;BaseQRankSum=3.802;DP=642;FS=7.054;HRun=0;HaplotypeScore=171.3592;InbreedingCoeff=-0.1721;MQ=66.67;MQ0=2;MQRankSum=-0.542;QD=6.09;ReadPosRankSum=-1.464;VQSLOD=2.2787;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:10:6.49:0,6,85	0/1:8,6:14:51.01:212,0,51	0/0:14,0:13:36.05:0,36,425	0/0:12,0:11:23.93:0,24,326	0/0:48,0:48:75.81:0,76,1040	0/1:13,2:15:51.75:184,0,52	0/1:16,0:15:15.56:16,0,86	0/0:46,0:46:99:0,123,1685	0/1:10,4:14:66.06:180,0,66	0/0:38,0:38:99:0,114,1542	0/0:37,0:37:96.21:0,96,1334	0/0:25,0:25:59.90:0,60,837	0/0:24,0:23:59.97:0,60,817	0/0:24,0:24:72.23:0,72,1004	0/0:23,0:23:34.52:0,35,495	0/0:24,0:24:60.11:0,60,794	0/1:16,0:15:19.66:20,0,115	0/0:9,0:8:11.40:0,11,246	0/1:19,2:21:84.10:216,0,84	0/1:32,3:35:99:123,0,312	0/0:17,0:17:39.13:0,39,556	0/0:10,0:10:27.09:0,27,385	0/0:24,0:24:63.19:0,63,881	0/0:11,0:11:27.08:0,27,368	0/1:24,4:28:99:153,0,252	0/0:21,0:21:60.19:0,60,837	0/0:33,0:32:84.27:0,84,1178	0/0:32,0:32:81.23:0,81,1124
chr10	7692715	.	CAA	C	1437.74	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=1.286;DP=508;FS=1.832;HRun=12;HaplotypeScore=70.5355;InbreedingCoeff=0.9074;MQ=57.06;MQ0=10;MQRankSum=1.663;QD=19.17;ReadPosRankSum=0.049;VQSLOD=2.9382;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:32:57.92:0,58,581	0/0:12,0:12:33.04:0,33,444	0/0:3,0:1:3.01:0,3,43	0/0:12,0:7:15.52:0,16,173	1/1:7,20:27:54.02:538,54,0	0/0:13,0:15:32.04:0,32,388	0/0:13,0:14:35.60:0,36,474	1/1:5,14:18:42.03:418,42,0	0/0:11,0:12:32.10:0,32,418	0/0:23,0:24:63.12:0,63,837	0/0:24,0:27:62.18:0,62,849	0/0:22,0:22:47.74:0,48,671	0/0:16,0:17:42.09:0,42,581	0/0:18,0:19:41.63:0,42,581	1/1:7,10:15:30.06:305,30,0	1/1:1,11:11:33.08:336,33,0	0/0:26,0:28:60.11:0,60,813	0/0:16,0:17:35.61:0,36,500	0/0:11,0:14:41.57:0,42,519	0/0:21,0:22:50.65:0,51,699	0/0:6,0:6:8.99:0,9,109	0/0:16,0:17:35.61:0,36,495	0/0:17,0:19:47.13:0,47,642	0/0:16,0:18:31.96:0,32,419	0/0:20,0:20:54.17:0,54,764	0/0:30,0:30:72.20:0,72,1024	0/0:26,0:27:59.69:0,60,857	0/0:3,0:3:5.99:0,6,66
chr10	7694635	.	AAGTGTATATGGGGAAAGAGGTGGTGGGTGAGCTGAAACT	A	9667.89	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=8.297;DP=579;FS=25.968;HRun=0;HaplotypeScore=539.6179;InbreedingCoeff=0.9390;MQ=84.42;MQ0=0;MQRankSum=-9.025;QD=87.89;ReadPosRankSum=4.741;VQSLOD=0.6976;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:93.32:0,93,12375	0/0:7,0:7:18.06:0,18,2077	0/0:27,0:27:69.21:0,69,3712	0/0:21,0:21:57.13:0,57,3445	0/0:27,0:27:81.28:0,81,9363	0/0:23,0:23:69.24:0,69,10163	0/0:28,0:28:84.27:0,84,9645	0/0:29,0:29:84.28:0,84,6075	0/0:33,0:33:99:0,99,13665	1/1:13,2:15:18.05:822,18,0	1/1:5,7:12:21.07:2068,21,0	1/1:5,5:10:15.05:1503,15,0	1/1:4,3:7:9.03:902,9,0	1/1:3,1:4:6.02:350,6,0	0/0:25,0:25:69.24:0,69,10321	0/0:18,0:18:48.16:0,48,6795	0/0:32,0:32:87.26:0,87,11187	1/1:3,3:6:6.02:601,6,0	0/0:20,0:20:57.19:0,57,5213	0/0:26,0:26:78.27:0,78,10262	0/0:27,0:27:78.23:0,78,10398	1/1:17,10:27:18.06:1734,18,0	1/1:10,5:15:15.05:1347,15,0	1/1:12,2:14:9.38:341,9,0	0/0:16,0:16:45.15:0,45,6250	0/0:26,0:26:69.23:0,69,8565	0/0:27,0:27:81.28:0,81,10470	0/0:24,0:24:72.25:0,72,10477
chr10	7694747	.	G	GA	21275.28	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-7.327;DP=614;FS=9.394;HRun=4;HaplotypeScore=60.5194;InbreedingCoeff=0.9961;MQ=69.85;MQ0=0;MQRankSum=-4.262;QD=37.26;ReadPosRankSum=1.451;VQSLOD=4.6794;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:60.17:0,60,680	1/1:0,19:19:57.19:780,57,0	0/0:10,0:10:21.02:0,21,225	0/0:11,0:11:20.31:0,20,267	1/1:3,24:27:72.24:985,72,0	1/1:0,25:25:75.25:1026,75,0	1/1:1,10:11:30.10:410,30,0	1/1:1,27:27:81.27:1107,81,0	1/1:1,31:32:93.31:1272,93,0	1/1:3,31:33:93.29:1254,93,0	1/1:1,18:19:48.16:656,48,0	1/1:4,19:23:60.19:808,60,0	1/1:3,14:17:42.14:574,42,0	1/1:0,14:14:42.14:574,42,0	1/1:1,20:21:57.19:780,57,0	1/1:0,23:23:63.21:862,63,0	1/1:0,26:26:78.26:1067,78,0	1/1:1,10:11:27.05:348,27,0	1/1:1,16:17:48.16:656,48,0	1/1:2,32:34:90.26:1210,90,0	1/1:0,13:13:36.12:492,36,0	1/1:1,20:21:57.19:778,57,0	1/1:2,26:28:75.21:1004,75,0	1/1:1,14:15:33.11:451,33,0	1/1:1,28:29:75.25:1026,75,0	1/1:4,28:32:84.28:1149,84,0	1/1:1,31:32:87.29:1189,87,0	1/1:3,17:20:60.20:816,60,0
chr10	7695364	.	GTC	G	672.28	PASS	AB=1.000;AC=17;AF=0.340;AN=50;BaseQRankSum=2.043;DP=425;FS=4.167;HRun=0;HaplotypeScore=102.4843;InbreedingCoeff=0.4556;MQ=80.07;MQ0=7;MQRankSum=-1.243;QD=4.25;ReadPosRankSum=3.795;VQSLOD=2.3383;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:20:6.70:0,7,43	0/0:7,0:7:2.94:0,3,18	0/1:41,0:31:0.94:1,0,11	0/0:33,0:23:8.83:0,9,75	0/0:15,0:15:6.14:0,6,36	0/0:23,0:23:12.69:0,13,84	0/0:15,0:15:6.81:0,7,41	0/0:33,0:32:29.58:0,30,211	0/0:9,0:9:0.13:0,0,1	0/1:18,0:17:8.44:58,0,8	0/0:13,0:13:5.73:0,6,35	0/1:12,0:12:12.41:12,0,13	1/1:6,0:6:2.90:16,3,0	./.	0/0:10,0:9:0:0,0,0	./.	0/0:11,0:11:14.91:0,15,111	1/1:10,0:10:5.84:34,6,0	0/0:19,0:17:14.87:0,15,108	0/0:19,0:18:9.29:0,9,49	1/1:8,0:8:3:26,3,0	0/0:4,0:4:2.99:0,3,23	./.	1/1:9,0:9:2.93:19,3,0	0/0:10,0:10:3:0,3,28	1/1:14,1:14:7.14:194,7,0	1/1:15,4:18:26.32:207,26,0	1/1:12,8:20:24.05:257,24,0
chr10	7695383	.	TCTCTCTCTCTCTTTGTCTC	T	749.39	PASS	AB=0.874;AC=10;AF=0.179;AN=56;BaseQRankSum=4.611;DP=408;FS=2.601;HRun=0;HaplotypeScore=186.7132;InbreedingCoeff=0.2521;MQ=58.35;MQ0=18;MQRankSum=-4.427;QD=7.65;ReadPosRankSum=-0.435;VQSLOD=2.2598;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:23:38.54:0,39,895	0/0:5,0:5:6:0,6,231	0/0:37,0:17:11.13:0,11,283	0/0:54,0:19:46.51:0,47,831	0/0:11,0:10:22.17:0,22,360	0/0:18,0:18:36.83:0,37,573	0/0:11,0:11:14.91:0,15,375	0/1:35,0:34:9.77:10,0,2147	0/0:8,0:8:14.71:0,15,387	0/1:12,3:14:16.71:513,0,17	0/0:7,0:7:9.50:0,9,58	0/1:11,4:15:25.32:57,0,25	1/1:10,2:12:3.66:107,4,0	1/1:3,2:6:1.56:10,2,0	0/0:7,0:6:12.08:0,12,327	0/0:6,0:4:9.90:0,10,223	0/0:12,0:11:21.07:0,21,648	0/1:6,1:6:27.92:150,0,28	0/0:14,0:12:36.08:0,36,983	0/0:15,0:14:32.15:0,32,782	0/0:4,0:4:9.03:0,9,115	0/0:6,1:7:5.76:0,6,22	0/0:8,1:9:6.37:0,6,32	1/1:8,0:7:4.37:36,4,0	0/0:6,0:6:11.84:0,12,338	0/0:17,0:14:3.78:0,4,771	0/0:16,0:15:36.12:0,36,722	0/0:20,0:20:45.12:0,45,934
chr10	7695394	.	CTT	C	1862.64	PASS	AB=0.947;AC=39;AF=0.696;AN=56;BaseQRankSum=-5.152;DP=352;FS=0.968;HRun=3;HaplotypeScore=93.1096;InbreedingCoeff=0.3078;MQ=58.75;MQ0=18;MQRankSum=1.029;QD=6.42;ReadPosRankSum=3.156;VQSLOD=0.2570;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:21:19.64:163,20,0	0/0:4,0:4:0:0,0,0	0/0:33,0:10:0.26:0,0,67	0/1:56,1:15:33.21:44,0,33	1/1:10,0:9:2.81:76,3,0	1/1:11,0:11:0.27:53,0,0	1/1:9,0:9:8.30:57,8,0	1/1:26,0:26:54.75:347,55,0	1/1:7,0:7:10.98:85,11,0	1/1:14,1:13:26.61:212,27,0	0/0:4,1:5:0.47:0,0,1	1/1:11,3:14:8.22:91,8,0	0/1:10,2:12:4.79:52,0,5	1/1:6,0:6:1.78:5,2,0	1/1:7,0:6:10.94:61,11,0	1/1:6,0:4:8.22:66,8,0	0/1:9,0:8:2.94:3,0,3	1/1:2,4:5:6.02:72,6,0	1/1:12,0:10:11.71:86,12,0	1/1:12,0:11:1.04:81,1,0	0/0:2,0:2:0.47:0,0,1	0/0:6,0:6:3.16:0,3,8	0/0:7,1:8:0.47:0,0,1	1/1:8,1:8:5.97:67,6,0	0/0:3,0:3:1.25:0,1,3	1/1:14,0:11:25.67:163,26,0	1/1:13,0:12:16.13:84,16,0	1/1:14,0:14:24.34:108,24,0
chr10	7695395	.	TTTGTCTC	T	1120.12	PASS	AB=1.000;AC=18;AF=0.333;AN=54;BaseQRankSum=-1.131;DP=340;FS=1.398;HRun=0;HaplotypeScore=105.7823;InbreedingCoeff=0.3108;MQ=57.45;MQ0=18;MQRankSum=0.685;QD=8.24;ReadPosRankSum=2.921;VQSLOD=2.0541;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:21:27.48:0,27,179	0/0:4,0:4:3.01:0,3,66	0/0:32,0:9:16.24:0,16,249	0/0:58,0:15:25.83:0,26,275	0/0:10,0:9:1:0,1,53	0/0:9,0:9:1.23:0,1,31	0/0:9,0:9:2.85:0,3,80	0/1:23,0:23:99:152,0,160	0/1:7,0:7:2.12:2,0,21	1/1:14,0:12:13.55:240,14,0	0/0:4,0:4:0.47:0,0,1	0/0:14,0:14:3.86:0,4,14	1/1:12,0:12:2.67:24,3,0	1/1:6,0:6:2.14:9,2,0	0/0:7,0:6:7.42:0,7,56	0/1:6,0:4:5.81:6,0,6	0/0:8,0:7:8.24:0,8,97	0/1:6,0:5:2.34:52,0,2	0/1:10,0:8:38.98:39,0,176	0/1:11,0:10:1.76:2,0,79	./.	0/0:6,0:6:2.19:0,2,5	0/0:8,0:8:0.47:0,0,1	0/0:9,0:8:2.03:0,2,5	0/0:3,0:3:3.48:0,3,70	1/1:11,3:11:22.41:220,22,0	1/1:7,6:12:17.32:180,17,0	1/1:10,4:14:26.81:344,27,0
chr10	7695396	.	TTGTCTC	T	3085.27	PASS	AB=0.887;AC=33;AF=0.611;AN=54;BaseQRankSum=-3.920;DP=336;FS=0.000;HRun=0;HaplotypeScore=94.7219;InbreedingCoeff=0.1412;MQ=57.42;MQ0=16;MQRankSum=-0.311;QD=14.22;ReadPosRankSum=-0.223;VQSLOD=2.3852;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:21,0:21:30.92:32,0,31	0/0:4,0:4:3.01:0,3,39	0/0:35,0:10:14.88:0,15,197	0/0:58,0:15:5.02:0,5,124	0/1:8,2:9:8.94:52,0,9	1/1:9,0:9:5.44:52,5,0	0/1:9,0:9:25.05:45,0,25	0/1:5,18:23:7.84:693,0,8	1/1:7,0:7:9.46:76,9,0	1/1:4,9:12:26.97:460,27,0	0/0:1,2:3:0.47:0,0,1	1/1:8,5:13:12.71:112,13,0	1/1:4,8:12:8.66:124,9,0	1/1:3,3:6:2.20:8,2,0	1/1:5,1:6:0.85:35,1,0	1/1:6,0:4:8.49:66,8,0	0/1:8,0:7:25.35:26,0,25	1/1:6,0:5:5.97:82,6,0	0/1:7,2:8:88.95:169,0,89	0/1:11,0:10:19.04:88,0,19	./.	0/0:1,5:6:0.94:0,1,2	0/0:2,6:8:0.47:0,0,1	1/1:1,6:6:2.67:19,3,0	0/0:3,0:3:3.01:0,3,54	1/1:4,9:10:29.97:420,30,0	1/1:13,0:12:18.01:230,18,0	1/1:13,1:14:27.06:446,27,0
chr10	7695402	.	C	CTCTCTCTT	1494.51	PASS	AB=1.000;AC=40;AF=0.741;AN=54;BaseQRankSum=-0.826;DP=334;FS=10.238;HRun=0;HaplotypeScore=105.8701;InbreedingCoeff=0.2729;MQ=54.28;MQ0=15;MQRankSum=-2.662;QD=8.26;ReadPosRankSum=-1.628;VQSLOD=0.5759;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:16.71:0,17,233	1/1:4,0:4:3.01:114,3,0	0/0:43,0:14:25.56:0,26,340	0/0:74,0:15:16.64:0,17,299	1/1:7,0:6:6.91:38,7,0	1/1:9,0:9:15.09:73,15,0	1/1:7,0:7:5.65:31,6,0	1/1:25,0:25:42.12:378,42,0	1/1:6,0:6:11.36:75,11,0	0/1:12,0:11:59.97:60,0,94	1/1:2,0:2:0.47:1,0,0	1/1:10,0:10:3.60:25,4,0	1/1:10,0:10:8.63:59,9,0	0/1:6,0:6:0.05:0,0,0	0/1:7,0:6:24.02:32,0,24	1/1:4,0:2:2.92:19,3,0	1/1:1,7:7:8.99:269,9,0	0/1:4,0:4:12.61:13,0,31	1/1:7,0:7:13.07:281,13,0	1/1:9,0:8:10.13:79,10,0	./.	1/1:6,0:6:1.83:4,2,0	1/1:7,0:7:0.47:1,0,0	1/1:6,0:5:0.47:1,0,0	1/1:3,0:3:3.82:31,4,0	0/1:13,0:10:21.18:35,0,21	0/0:12,0:11:4.37:0,4,36	0/1:9,0:9:29.39:29,0,91
chr10	7695406	.	C	CTCTT	381.20	PASS	AB=0.976;AC=26;AF=0.481;AN=54;BaseQRankSum=1.074;DP=344;FS=4.102;HRun=0;HaplotypeScore=96.3682;InbreedingCoeff=0.3204;MQ=52.68;MQ0=17;MQRankSum=-2.613;QD=3.15;ReadPosRankSum=-4.005;VQSLOD=0.3367;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:18.10:0,18,248	1/1:0,4:4:3.01:61,3,0	0/0:53,0:15:21.24:0,21,312	0/0:81,0:17:26.90:0,27,284	1/1:7,0:6:6.04:16,6,0	0/1:8,0:8:2.64:40,0,3	1/1:7,0:7:5.17:20,5,0	0/1:31,0:30:13.63:14,0,212	0/1:5,0:5:2.37:45,0,2	0/0:11,0:10:23.87:0,24,195	1/1:2,0:2:0.47:1,0,0	0/0:10,0:10:6.01:0,6,52	0/0:9,0:9:1.87:0,2,26	0/0:6,0:6:0.28:0,0,1	0/0:7,0:6:0.11:0,0,33	1/1:4,0:2:2.92:19,3,0	0/1:8,0:7:4.11:100,0,4	0/0:4,0:4:5.93:0,6,48	0/1:5,1:6:2.58:109,0,3	1/1:8,0:7:9.87:54,10,0	./.	1/1:5,0:5:2.19:4,2,0	1/1:7,0:7:0.47:1,0,0	1/1:5,0:4:0.47:1,0,0	1/1:2,0:2:5.49:35,5,0	0/1:12,0:9:7.21:7,0,67	0/0:10,0:9:4.37:0,4,45	0/0:8,0:8:12.19:0,12,129
chr10	7695474	.	G	GACAC	370.42	PASS	AB=1.000;AC=27;AF=0.844;AN=32;BaseQRankSum=-0.050;DP=217;FS=0.000;HRun=0;HaplotypeScore=50.9788;InbreedingCoeff=0.2552;MQ=32.27;MQ0=42;MQRankSum=1.535;QD=3.25;ReadPosRankSum=-1.535;VQSLOD=1.1971;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:13,8:21:3.01:46,3,0	./.	./.	./.	0/0:7,0:5:0:0,0,0	./.	1/1:9,0:8:3.39:20,3,0	1/1:14,0:8:6.70:18,7,0	1/1:9,0:8:3.70:16,4,0	1/1:7,0:5:10.87:76,11,0	1/1:5,0:5:3.01:30,3,0	1/1:4,0:4:2.98:21,3,0	1/1:3,0:3:2.69:8,3,0	1/1:9,0:9:5.82:36,6,0	./.	./.	./.	1/1:4,0:4:6.06:34,6,0	1/1:14,0:10:16.01:69,16,0	./.	./.	0/1:4,0:4:0:0,0,0	./.	./.	./.	1/1:5,0:5:11.52:67,12,0	1/1:6,0:5:1.25:3,1,0	0/0:1,0:1:0.89:0,1,2
chr10	7695501	.	ACGCGCG	A	1125.31	PASS	AB=1.000;AC=24;AF=0.571;AN=42;BaseQRankSum=0.494;DP=259;FS=1.086;HRun=0;HaplotypeScore=72.2700;InbreedingCoeff=0.4861;MQ=47.38;MQ0=2;MQRankSum=-1.270;QD=7.81;ReadPosRankSum=0.988;VQSLOD=1.8266;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:32.14:0,32,683	./.	./.	./.	0/0:10,0:9:2.04:0,2,7	1/1:1,9:10:0.47:1,0,0	1/1:13,5:17:30.04:544,30,0	0/0:12,0:12:12.76:0,13,169	1/1:12,0:11:12.01:193,12,0	0/0:13,0:13:2.28:0,2,33	0/1:10,0:10:0:0,0,0	0/0:7,0:7:0:0,0,0	1/1:6,0:6:3.01:34,3,0	0/1:11,0:11:0:0,0,0	./.	0/0:4,0:4:4.07:0,4,12	./.	0/1:8,0:8:0.95:1,0,18	1/1:16,0:16:17.82:198,18,0	./.	1/1:11,0:10:0.47:1,0,0	1/1:5,0:5:0.47:1,0,0	1/1:16,0:16:2.67:18,3,0	0/0:11,0:11:0.10:0,0,0	./.	1/1:9,0:9:14.94:233,15,0	0/1:9,0:8:0.01:0,0,0	1/1:3,0:3:2.94:18,3,0
chr10	7695502	.	CGCGCGCGCAT	C	1157.75	PASS	AB=1.000;AC=24;AF=0.571;AN=42;BaseQRankSum=-0.580;DP=259;FS=0.000;HRun=0;HaplotypeScore=78.7683;InbreedingCoeff=0.4830;MQ=47.96;MQ0=1;MQRankSum=-0.998;QD=7.98;ReadPosRankSum=-0.364;VQSLOD=1.4886;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:32.14:0,32,1083	./.	0/0:3,0:1:2.37:0,2,8	./.	0/0:10,0:9:2.51:0,3,7	1/1:10,0:10:0.47:1,0,0	1/1:18,0:17:28.85:470,29,0	0/0:11,0:11:3.84:0,4,75	1/1:12,0:11:11.89:171,12,0	0/0:13,0:13:18.57:0,19,168	0/0:10,0:10:0:0,0,0	0/1:7,0:7:0:0,0,0	1/1:7,0:7:3:28,3,0	0/1:13,0:13:0:0,0,0	./.	0/0:4,0:4:4.07:0,4,12	./.	0/1:9,0:9:4.44:4,0,27	1/1:5,9:14:23.31:199,23,0	./.	1/1:4,6:10:0.47:1,0,0	1/1:5,0:5:0.47:1,0,0	1/1:17,0:17:2.55:12,3,0	0/1:11,0:11:0.02:0,0,0	./.	1/1:2,7:9:17.98:336,18,0	./.	1/1:3,0:3:3.01:55,3,0
chr10	7695506	.	CGCGCAT	C	1683.25	PASS	AB=0.769;AC=28;AF=0.667;AN=42;BaseQRankSum=1.263;DP=263;FS=12.260;HRun=0;HaplotypeScore=72.8611;InbreedingCoeff=0.5116;MQ=49.38;MQ0=0;MQRankSum=-1.626;QD=10.59;ReadPosRankSum=2.188;VQSLOD=0.9932;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:38.07:0,38,988	./.	1/1:3,0:1:2.74:12,3,0	./.	0/0:12,0:11:6.11:0,6,19	1/1:10,0:10:0.47:1,0,0	1/1:20,0:19:30.04:519,30,0	0/0:8,0:8:3.42:0,3,30	1/1:11,0:11:12:185,12,0	1/1:17,0:17:48.05:520,48,0	0/1:10,0:10:0:0,0,0	0/0:0,7:7:0:0,0,0	1/1:0,7:7:3.01:65,3,0	0/1:2,12:14:0:0,0,0	./.	0/0:4,0:4:4.07:0,4,12	./.	1/1:11,0:11:8.84:81,9,0	1/1:13,0:13:6.82:167,7,0	./.	1/1:9,0:9:0.47:1,0,0	1/1:1,5:6:0.47:1,0,0	1/1:1,17:18:3.21:35,3,0	0/0:0,11:11:0.10:0,0,0	./.	1/1:8,0:8:11.71:201,12,0	./.	1/1:2,0:2:2.84:14,3,0
chr10	7695508	.	CGCAT	C	1585.23	PASS	AB=0.918;AC=23;AF=0.575;AN=40;BaseQRankSum=0.577;DP=263;FS=7.400;HRun=0;HaplotypeScore=71.3008;InbreedingCoeff=0.4645;MQ=49.65;MQ0=0;MQRankSum=-2.218;QD=10.36;ReadPosRankSum=1.696;VQSLOD=1.4652;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:38.05:0,38,763	./.	1/1:3,0:1:2.74:12,3,0	./.	0/0:11,0:10:6.58:0,7,19	0/1:11,0:11:0:0,0,0	1/1:23,0:22:29.98:337,30,0	0/0:7,0:7:2.41:0,2,9	1/1:13,0:13:9.23:113,9,0	1/1:16,2:18:51.17:830,51,0	0/1:3,7:10:0:0,0,0	0/1:7,0:7:0:0,0,0	1/1:7,0:7:3.01:44,3,0	./.	./.	0/0:4,0:4:4.07:0,4,12	./.	1/1:1,10:11:9.03:158,9,0	0/1:10,0:10:3.29:79,0,3	./.	1/1:8,0:8:0.47:1,0,0	0/1:6,0:6:0:0,0,0	1/1:18,0:18:2.86:17,3,0	0/0:11,0:11:0:0,0,0	./.	1/1:8,0:8:6.76:109,7,0	./.	0/0:2,0:2:1.82:0,2,5
chr10	7695510	.	CAT	C	1033.62	PASS	AB=1.000;AC=23;AF=0.548;AN=42;BaseQRankSum=1.184;DP=253;FS=6.977;HRun=0;HaplotypeScore=67.6594;InbreedingCoeff=0.4285;MQ=53.58;MQ0=0;MQRankSum=-1.311;QD=7.03;ReadPosRankSum=1.807;VQSLOD=1.8403;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:41.64:0,42,684	./.	1/1:4,0:2:2.74:12,3,0	./.	0/0:1,0:11:4.41:0,4,15	0/1:10,0:10:0:0,0,0	1/1:22,0:21:24.82:146,25,0	0/0:4,0:4:1.55:0,2,4	1/1:10,0:10:8.59:51,9,0	1/1:2,17:19:54.15:679,54,0	0/0:7,2:9:0.47:0,0,1	0/1:7,0:7:0:0,0,0	1/1:7,0:7:3.01:45,3,0	./.	./.	0/0:1,0:3:4.07:0,4,12	./.	1/1:10,1:11:9.03:126,9,0	0/1:9,0:9:5.73:36,0,6	./.	0/1:6,0:6:0:0,0,0	0/1:6,0:6:0.02:0,0,0	1/1:17,1:18:2.66:17,3,0	0/0:11,0:11:0.17:0,0,0	1/1:10,1:11:0.47:1,0,0	1/1:7,0:7:3.61:34,4,0	./.	0/0:3,0:3:3.11:0,3,8
chr10	7695748	.	C	CTTTT	5977.09	PASS	AB=1.000;AC=35;AF=0.625;AN=56;BaseQRankSum=-8.730;DP=470;FS=7.566;HRun=10;HaplotypeScore=91.3297;InbreedingCoeff=0.8376;MQ=60.69;MQ0=9;MQRankSum=-0.346;QD=20.90;ReadPosRankSum=-0.271;VQSLOD=2.4217;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,114,1496	0/0:6,0:6:14.73:0,15,91	0/0:15,0:10:7.39:0,7,161	0/0:11,0:9:12.39:0,12,125	1/1:3,0:16:32.89:358,33,0	0/0:21,0:19:38.13:0,38,230	0/0:10,0:10:20.47:0,20,121	1/1:8,0:28:52.90:431,53,0	0/0:16,0:16:35.22:0,35,211	1/1:4,8:13:18.01:301,18,0	1/1:7,12:19:33.03:626,33,0	1/1:4,11:13:21.07:495,21,0	1/1:6,6:12:9.92:214,10,0	1/1:7,4:13:8.95:145,9,0	1/1:6,0:23:37.21:445,37,0	1/1:6,0:17:16.06:353,16,0	0/0:24,0:24:48.48:0,48,302	1/1:4,11:14:21.07:495,21,0	0/0:25,0:24:32.65:0,33,204	0/1:20,0:20:18.21:18,0,242	1/1:4,5:10:9.03:212,9,0	1/1:4,5:9:8.97:115,9,0	1/1:5,9:16:14.97:286,15,0	1/1:6,7:15:14.92:250,15,0	0/0:10,0:10:20.24:0,20,117	1/1:10,14:27:51.53:919,52,0	1/1:0,9:10:15.05:276,15,0	1/1:1,0:2:3.01:37,3,0
chr10	7695758	.	TC	T	3735.66	PASS	AB=0.929;AC=17;AF=0.304;AN=56;BaseQRankSum=-5.185;DP=414;FS=3.390;HRun=1;HaplotypeScore=67.2217;InbreedingCoeff=0.8682;MQ=56.57;MQ0=13;MQRankSum=3.045;QD=27.07;ReadPosRankSum=4.048;VQSLOD=3.6595;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,120,1609	1/1:1,7:7:15.05:203,15,0	0/0:7,0:5:12.04:0,12,169	0/0:9,0:7:13.20:0,13,120	0/0:18,0:18:29.09:0,29,282	1/1:2,16:16:39.13:540,39,0	1/1:0,11:11:21.07:290,21,0	0/0:26,0:24:17.26:0,17,271	1/1:0,17:17:36.12:496,36,0	0/0:12,0:11:26.12:0,26,187	0/0:13,0:13:26.57:0,27,184	0/0:15,0:14:32.87:0,33,253	0/0:6,0:6:11.89:0,12,85	0/0:9,0:9:17.92:0,18,136	0/0:25,0:24:50.77:0,51,391	0/1:12,1:13:8.58:9,0,193	1/1:2,23:25:47.94:673,48,0	0/0:13,0:12:23.90:0,24,180	1/1:1,15:15:42.09:528,42,0	1/1:3,17:20:51.15:705,51,0	0/0:12,0:12:17.96:0,18,145	0/0:7,0:7:11.93:0,12,90	0/0:15,0:14:17.71:0,18,127	0/0:13,0:12:17.52:0,18,136	1/1:0,10:10:21.07:291,21,0	0/0:19,0:18:47.38:0,47,365	0/0:11,0:11:20.92:0,21,176	0/0:1,0:1:2.99:0,3,23
chr10	7696380	.	CAGAGAGAGAAAG	C	6613.40	PASS	AB=0.942;AC=44;AF=0.786;AN=56;BaseQRankSum=-4.254;DP=579;FS=6.184;HRun=0;HaplotypeScore=166.8038;InbreedingCoeff=0.0424;MQ=69.12;MQ0=25;MQRankSum=-0.603;QD=13.44;ReadPosRankSum=2.533;VQSLOD=3.4691;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:64:0,64,831	1/1:7,0:7:14.90:174,15,0	0/0:55,0:19:1.73:0,2,147	0/1:78,0:24:27.43:27,0,162	0/1:14,0:14:74.77:75,0,227	1/1:16,0:16:32.96:273,33,0	1/1:13,0:13:26.97:224,27,0	1/1:27,0:27:67.13:550,67,0	1/1:17,0:17:47.89:392,48,0	1/1:24,0:24:54.06:536,54,0	1/1:16,1:17:38.92:316,39,0	1/1:17,1:18:44.91:477,45,0	0/1:3,1:21:2.30:103,0,2	1/1:0,10:10:3.01:68,3,0	0/1:16,0:16:86.79:172,0,87	0/1:19,0:18:99:268,0,276	1/1:16,0:16:44.43:317,44,0	1/1:10,1:11:8.81:264,9,0	1/1:18,0:18:42.03:399,42,0	1/1:17,0:17:20.36:208,20,0	0/1:25,0:24:99:119,0,423	1/1:23,0:23:44.94:396,45,0	1/1:19,0:19:41.95:348,42,0	1/1:6,9:15:3.01:60,3,0	1/1:9,0:8:20.98:177,21,0	0/1:16,0:16:46.50:287,0,46	0/1:17,0:17:44.02:237,0,44	1/1:9,0:9:1.15:145,1,0
chr10	7696388	.	GAA	G	7225.50	PASS	AB=1.000;AC=50;AF=0.893;AN=56;BaseQRankSum=-1.854;DP=548;FS=0.000;HRun=3;HaplotypeScore=75.1076;InbreedingCoeff=0.3613;MQ=63.37;MQ0=29;MQRankSum=-0.336;QD=14.51;ReadPosRankSum=1.210;VQSLOD=1.7525;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:39,0:38:99:122,0,431	1/1:6,0:6:14.89:112,15,0	0/0:50,0:14:1.80:0,2,147	0/1:76,0:22:0.72:1,0,165	1/1:10,0:10:26.56:206,27,0	1/1:16,0:16:32.96:273,33,0	1/1:11,0:11:26.96:223,27,0	1/1:1,23:23:68.83:565,69,0	1/1:17,0:17:47.89:392,48,0	1/1:20,0:20:54.05:509,54,0	1/1:15,0:15:38.92:316,39,0	1/1:16,0:16:44.87:361,45,0	1/1:20,0:19:2.98:22,3,0	0/1:10,0:10:0:0,0,0	1/1:15,0:14:23.88:219,24,0	1/1:19,0:18:34.47:310,34,0	1/1:16,0:16:44.57:322,45,0	1/1:10,0:11:14.77:185,15,0	1/1:16,0:16:42.01:375,42,0	1/1:13,0:13:20.64:173,21,0	1/1:28,0:27:59.92:497,60,0	1/1:17,0:17:44.93:369,45,0	1/1:15,0:15:41.95:347,42,0	0/1:12,0:12:14.92:19,0,15	1/1:9,0:8:20.98:177,21,0	1/1:19,0:19:57.03:520,57,0	1/1:20,0:20:53.64:418,54,0	1/1:8,0:8:23.95:193,24,0
chr10	7696445	.	G	GA	4368.40	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-8.376;DP=563;FS=2.563;HRun=4;HaplotypeScore=81.0791;InbreedingCoeff=0.9972;MQ=71.57;MQ0=10;MQRankSum=1.896;QD=34.40;ReadPosRankSum=0.328;VQSLOD=5.3063;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:63.16:0,63,702	1/1:1,13:14:39.13:534,39,0	0/0:27,0:14:38.85:0,39,391	0/0:55,0:32:80.86:0,81,881	0/0:30,0:29:81.21:0,81,908	1/1:0,16:15:42.14:568,42,0	1/1:2,11:13:30.06:389,30,0	0/0:28,0:28:63.13:0,63,699	1/1:1,9:9:27.09:354,27,0	0/0:30,0:30:87.24:0,87,974	0/0:20,0:20:47.78:0,48,578	0/0:17,0:16:42.10:0,42,460	0/0:20,0:20:57.13:0,57,628	0/0:15,0:15:42.12:0,42,476	0/0:16,0:16:42.12:0,42,474	0/0:12,0:11:24.03:0,24,272	1/1:2,17:19:53.85:701,54,0	0/0:9,0:9:24.54:0,25,273	1/1:3,16:19:45.13:591,45,0	1/1:3,12:15:36.59:493,37,0	0/0:24,0:24:53.72:0,54,606	0/0:24,0:23:60.05:0,60,668	0/0:28,0:28:56.47:0,56,637	0/0:13,0:13:18.05:0,18,204	1/1:1,20:20:54.18:739,54,0	0/0:20,0:20:54.14:0,54,603	0/0:15,0:14:27.07:0,27,306	0/0:8,0:8:24.07:0,24,272
chr10	7696664	.	CCTGGAATA	C	7684.47	PASS	AB=0.947;AC=17;AF=0.304;AN=56;BaseQRankSum=10.685;DP=628;FS=5.156;HRun=0;HaplotypeScore=218.2660;InbreedingCoeff=0.9089;MQ=88.34;MQ0=0;MQRankSum=-14.309;QD=55.28;ReadPosRankSum=0.749;VQSLOD=4.1165;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,132,5588	1/1:1,4:5:12.04:351,12,0	0/0:29,0:29:87.30:0,87,3529	0/0:20,0:20:60.17:0,60,1900	0/0:25,0:25:75.26:0,75,3176	1/1:1,16:17:45.15:1292,45,0	1/1:0,9:9:21.07:608,21,0	0/0:27,0:27:78.27:0,78,3500	1/1:1,23:24:48.16:1387,48,0	0/0:30,0:30:90.31:0,90,3954	0/0:28,0:28:81.28:0,81,3640	0/0:23,0:23:69.22:0,69,2883	0/0:25,0:25:75.26:0,75,3233	0/0:31,0:31:90.31:0,90,4072	0/0:30,0:30:90.31:0,90,4074	0/1:17,1:18:28.36:28,0,2124	1/1:1,12:13:27.09:789,27,0	0/0:14,0:14:36.12:0,36,1559	1/1:2,17:19:51.13:1323,51,0	1/1:2,18:20:36.12:1053,36,0	0/0:23,0:23:69.24:0,69,2874	0/0:32,0:32:96.33:0,96,4198	0/0:24,0:24:72.23:0,72,3093	0/0:31,0:31:93.30:0,93,3869	1/1:2,12:14:30.10:853,30,0	0/0:18,0:18:54.19:0,54,2349	0/0:28,0:28:84.29:0,84,3680	0/0:7,0:7:21.07:0,21,951
chr10	7697726	.	GCACACACACACACACA	G	226.63	PASS	AB=0.833;AC=3;AF=0.060;AN=50;BaseQRankSum=3.153;DP=630;FS=3.609;HRun=0;HaplotypeScore=235.4470;InbreedingCoeff=0.0878;MQ=61.58;MQ0=20;MQRankSum=2.185;QD=2.52;ReadPosRankSum=-0.954;VQSLOD=2.4587;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:35:30.10:0,30,1141	0/0:10,0:10:6.02:0,6,197	./.	./.	0/0:23,0:22:12:0,12,149	0/0:24,0:23:18.49:0,18,546	0/0:39,0:37:32.37:0,32,1129	0/0:21,0:20:17.85:0,18,133	0/0:23,0:23:12.04:0,12,648	0/0:24,0:22:17.24:0,17,422	0/0:12,0:14:15.05:0,15,259	0/0:22,0:24:27.09:0,27,716	0/0:13,0:13:12.04:0,12,448	0/0:17,0:20:12.04:0,12,313	0/0:5,0:7:2.60:0,3,10	0/0:11,0:11:12.04:0,12,225	0/0:37,0:37:21.07:0,21,1067	0/0:22,0:21:27.56:0,28,722	0/0:24,0:21:9.98:0,10,229	0/0:19,0:17:3.01:0,3,201	0/1:41,0:38:27.43:34,0,27	0/0:18,0:22:8.48:0,8,255	0/0:17,0:16:9.03:0,9,291	0/0:23,0:27:18.53:0,19,495	0/0:21,0:20:9.50:0,10,609	0/1:21,8:28:75.64:164,0,76	0/1:12,8:19:1.49:126,0,1	./.
chr10	7697734	.	A	ACG	1114.27	PASS	AB=0.792;AC=12;AF=0.214;AN=56;BaseQRankSum=-4.757;DP=612;FS=29.255;HRun=0;HaplotypeScore=105.5825;InbreedingCoeff=0.3076;MQ=54.11;MQ0=25;MQRankSum=1.477;QD=5.38;ReadPosRankSum=-1.978;VQSLOD=0.6514;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:31:15.48:0,15,444	1/1:11,0:11:14.80:157,15,0	0/0:25,0:15:33:0,33,312	0/0:20,0:12:27.50:0,27,281	0/0:21,0:20:41.70:0,42,321	1/1:19,0:18:14.16:175,14,0	0/1:41,0:39:10.43:469,0,10	0/0:19,0:18:53.39:0,53,411	0/1:8,18:26:36.67:37,0,81	0/0:26,0:23:57.63:0,58,522	0/0:12,0:12:26.46:0,26,207	0/0:23,0:23:31.90:0,32,368	0/0:13,0:13:29.93:0,30,242	0/0:20,0:20:35.71:0,36,273	0/0:9,0:7:8.95:0,9,69	0/1:11,0:11:1.60:2,0,119	0/1:7,27:34:21.32:160,0,21	0/0:22,0:20:4.78:0,5,208	0/1:22,0:18:89.05:114,0,89	1/1:7,12:18:3.01:56,3,0	0/0:44,0:39:68.54:0,69,546	0/0:19,0:19:10.52:0,11,208	0/0:16,0:15:22.46:0,22,233	0/0:29,0:29:38.11:0,38,301	0/1:8,14:22:18.32:99,0,18	0/0:29,0:28:55.04:0,55,470	0/0:21,0:19:35.79:0,36,275	0/0:5,0:4:8.98:0,9,73
chr10	7699040	.	TGAGTGTGTGA	T	4826.25	PASS	AB=0.990;AC=29;AF=0.518;AN=56;BaseQRankSum=4.384;DP=713;FS=4.406;HRun=0;HaplotypeScore=218.9885;InbreedingCoeff=0.0955;MQ=64.51;MQ0=15;MQRankSum=-3.772;QD=10.85;ReadPosRankSum=1.142;VQSLOD=3.7389;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:46:81.75:0,82,2131	0/1:7,0:7:8.27:113,0,8	0/0:36,0:22:13.94:0,14,594	0/0:55,0:36:7.60:0,8,1014	0/1:19,1:20:0.01:0,0,0	0/1:28,1:29:54.08:595,0,54	0/0:31,0:31:2.94:0,3,18	1/1:27,0:26:4.13:615,4,0	0/1:31,0:32:49.22:49,0,99	1/1:23,0:23:0.54:314,1,0	0/1:18,0:18:13.60:77,0,14	0/1:19,0:19:0.54:50,0,1	1/1:18,0:18:9.49:91,9,0	0/1:31,0:31:48.39:286,0,48	1/1:17,0:17:11.99:156,12,0	1/1:20,2:21:42.73:653,43,0	0/0:21,0:20:3.01:0,3,38	0/1:19,0:19:44.90:96,0,45	0/1:27,0:26:99:403,0,149	0/0:21,0:20:5.91:0,6,74	0/0:30,0:30:3:0,3,25	0/1:21,0:21:65.07:65,0,123	0/0:27,0:27:11.72:0,12,96	1/1:26,0:26:5.78:60,6,0	0/1:21,0:21:10.99:11,0,26	1/1:30,0:29:28.55:579,29,0	1/1:26,0:26:9.79:550,10,0	1/1:12,0:12:3.01:64,3,0
chr10	7699044	.	TGTGTGAGA	T	6844.06	PASS	AB=0.934;AC=39;AF=0.696;AN=56;BaseQRankSum=3.576;DP=703;FS=8.650;HRun=0;HaplotypeScore=193.9973;InbreedingCoeff=0.2966;MQ=62.54;MQ0=17;MQRankSum=-5.314;QD=13.34;ReadPosRankSum=1.755;VQSLOD=2.8440;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:45:81.74:0,82,1733	1/1:7,0:7:15.94:241,16,0	0/0:35,0:21:15.81:0,16,596	0/0:53,0:34:7.36:0,7,1014	0/1:3,17:20:0.01:0,0,0	1/1:27,0:27:53.54:824,54,0	0/1:32,0:32:12.03:20,0,12	1/1:3,24:26:71.81:883,72,0	1/1:29,2:31:12.17:272,12,0	1/1:23,0:23:0.23:407,0,0	0/1:18,0:18:13.55:194,0,14	1/1:20,0:20:7.87:150,8,0	1/1:17,0:17:9.50:206,10,0	0/1:32,0:32:16.57:570,0,17	1/1:2,16:18:11.62:331,12,0	1/1:20,1:20:47.79:738,48,0	0/1:21,0:20:2.47:43,0,2	0/1:17,0:17:13.55:100,0,14	1/1:27,0:26:28.34:597,28,0	0/0:22,0:21:5.26:0,5,22	0/0:34,0:33:2.73:0,3,25	1/1:20,0:20:4.47:88,4,0	0/1:24,0:24:16.59:17,0,39	1/1:25,0:25:5.97:138,6,0	1/1:20,1:21:5.59:53,6,0	1/1:30,0:29:30.81:499,31,0	1/1:23,0:23:9.79:424,10,0	1/1:12,0:11:3.01:51,3,0
chr10	7699046	.	TGTGAGA	T	6270.10	PASS	AB=0.905;AC=41;AF=0.732;AN=56;BaseQRankSum=4.838;DP=712;FS=11.135;HRun=0;HaplotypeScore=184.5256;InbreedingCoeff=0.3550;MQ=62.20;MQ0=17;MQRankSum=-5.192;QD=12.06;ReadPosRankSum=3.622;VQSLOD=3.2310;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:44:81.72:0,82,1425	1/1:7,0:7:18.06:284,18,0	0/0:35,0:21:11.96:0,12,591	0/0:51,0:32:8.72:0,9,1016	0/1:19,0:19:0.01:0,0,0	1/1:23,6:29:62.81:1032,63,0	0/1:3,28:31:11.76:65,0,12	1/1:26,0:25:45.46:752,45,0	1/1:6,25:31:29.14:482,29,0	1/1:23,0:23:0.13:218,0,0	0/1:20,0:20:33:92,0,33	1/1:20,0:20:8.25:122,8,0	1/1:17,0:17:9.97:108,10,0	0/1:33,0:33:16.60:291,0,17	1/1:18,0:18:11.99:199,12,0	1/1:22,0:21:42.59:637,43,0	1/1:3,19:22:8.90:157,9,0	0/1:19,0:19:32.06:51,0,32	1/1:26,0:25:69.45:831,69,0	1/1:23,0:22:5.75:30,6,0	0/0:37,0:36:2.81:0,3,25	1/1:19,0:19:4.47:59,4,0	0/0:24,0:24:0.23:0,0,42	1/1:28,0:28:5.91:72,6,0	1/1:1,21:22:8.96:126,9,0	1/1:30,0:29:29.87:327,30,0	1/1:23,0:23:9.90:299,10,0	1/1:12,0:11:3.01:38,3,0
chr10	7699048	.	TGAGA	T	5608.04	PASS	AB=1.000;AC=40;AF=0.714;AN=56;BaseQRankSum=4.864;DP=720;FS=17.546;HRun=0;HaplotypeScore=175.1668;InbreedingCoeff=0.2869;MQ=61.33;MQ0=18;MQRankSum=-5.669;QD=10.18;ReadPosRankSum=3.440;VQSLOD=2.9826;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:45:72.19:0,72,1117	1/1:8,0:8:21.07:332,21,0	0/0:34,0:20:4.42:0,4,584	0/0:49,1:30:4.04:0,4,1009	0/1:18,0:18:0.01:0,0,0	1/1:31,0:31:65.95:1045,66,0	0/1:31,0:31:11.87:32,0,12	1/1:26,0:24:57.36:768,57,0	1/1:29,2:31:29.43:381,29,0	0/1:24,0:24:0.20:122,0,0	0/1:20,0:20:13.73:53,0,14	1/1:20,0:20:7.94:62,8,0	1/1:17,0:17:9.41:65,9,0	0/1:34,0:34:16.69:166,0,17	1/1:18,0:18:11.98:143,12,0	1/1:21,0:20:33.55:587,34,0	1/1:22,1:22:9.50:137,10,0	0/1:18,0:18:14.86:25,0,15	1/1:2,24:25:70.24:1021,70,0	1/1:1,23:23:6.02:120,6,0	0/0:39,0:38:2.93:0,3,25	1/1:20,0:20:3.88:26,4,0	0/1:25,0:25:0.34:0,0,43	1/1:28,0:28:5.91:44,6,0	0/1:23,0:23:0.51:95,0,1	1/1:30,0:29:26.04:186,26,0	1/1:22,0:22:9.76:174,10,0	1/1:13,0:11:2.99:24,3,0
chr10	7699050	.	AGAGTGTGT	A	6351.19	PASS	AB=1.000;AC=39;AF=0.722;AN=54;BaseQRankSum=3.312;DP=719;FS=4.503;HRun=0;HaplotypeScore=196.0743;InbreedingCoeff=0.3791;MQ=60.59;MQ0=19;MQRankSum=-3.427;QD=12.05;ReadPosRankSum=3.204;VQSLOD=3.8398;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:44:84.05:0,84,1525	0/1:9,0:9:3.69:98,0,4	0/0:32,0:19:14.11:0,14,276	0/0:50,0:28:34.42:0,34,552	0/1:18,0:18:0.01:0,0,0	1/1:32,0:32:2.79:351,3,0	0/1:31,0:31:3.46:3,0,13	1/1:26,0:24:36.04:319,36,0	0/1:30,0:30:51.66:137,0,52	1/1:1,22:25:59.84:864,60,0	1/1:3,17:21:7.09:281,7,0	1/1:0,19:20:8:197,8,0	1/1:1,15:16:12.36:275,12,0	1/1:3,31:35:30.36:773,30,0	1/1:16,0:16:11.83:260,12,0	1/1:22,0:21:38.83:394,39,0	0/1:21,0:20:4.35:4,0,49	1/1:2,15:18:13.99:199,14,0	0/1:25,0:24:99:217,0,117	0/0:25,0:24:6.02:0,6,72	./.	1/1:2,18:21:16.80:202,17,0	1/1:1,22:24:5.13:55,5,0	1/1:2,26:29:5.77:173,6,0	0/1:23,0:23:9.21:9,0,23	1/1:1,1:29:26.55:884,27,0	1/1:0,0:21:26.78:589,27,0	1/1:3,0:12:3.01:65,3,0
chr10	7699052	.	AGT	A	927.62	PASS	AB=0.958;AC=29;AF=0.558;AN=52;BaseQRankSum=6.174;DP=728;FS=0.820;HRun=0;HaplotypeScore=179.0730;InbreedingCoeff=0.1642;MQ=59.05;MQ0=21;MQRankSum=-4.290;QD=1.94;ReadPosRankSum=6.343;VQSLOD=2.1052;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:18,23:45:5.40:294,0,5	0/0:9,0:9:0:0,0,1	./.	0/0:48,0:26:0:0,0,0	0/0:18,0:18:0:0,0,0	0/1:35,0:35:18.62:19,0,37	0/1:31,0:31:5.68:6,0,6	0/0:28,0:25:22.23:0,22,241	1/1:30,0:30:7.38:44,7,0	0/1:26,0:26:16.05:71,0,16	0/1:20,0:20:12.32:30,0,12	1/1:20,0:20:8.35:41,8,0	1/1:16,0:16:8.35:41,8,0	1/1:34,0:34:25.41:122,25,0	1/1:16,0:16:10.98:49,11,0	0/1:22,0:22:3.51:4,0,104	0/1:23,0:22:12.58:13,0,19	0/1:18,0:18:12.21:19,0,12	0/0:27,0:26:12.20:0,12,56	0/0:27,0:26:4.74:0,5,16	./.	1/1:21,0:21:3.46:15,3,0	0/1:23,0:23:0:0,0,0	1/1:29,0:29:5.68:28,6,0	0/0:25,0:25:5.54:0,6,69	1/1:31,0:30:2.10:141,2,0	1/1:21,0:21:25.43:124,25,0	1/1:14,0:12:2.84:14,3,0
chr10	7699354	.	TA	T	6037.40	PASS	AB=0.901;AC=28;AF=0.500;AN=56;BaseQRankSum=12.110;DP=600;FS=4.464;HRun=10;HaplotypeScore=66.1404;InbreedingCoeff=0.8328;MQ=77.22;MQ0=0;MQRankSum=-2.047;QD=18.75;ReadPosRankSum=5.398;VQSLOD=5.5535;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:90.16:0,90,951	0/0:6,0:6:9.02:0,9,100	0/1:14,2:16:30.20:30,0,125	0/1:19,1:21:15.54:16,0,204	0/0:20,0:20:45.11:0,45,491	0/0:16,0:16:42.11:0,42,463	0/0:23,1:24:28.08:0,28,529	0/0:18,0:18:45.11:0,45,491	0/0:20,0:21:63.05:0,63,649	1/1:3,19:22:56.64:475,57,0	1/1:3,12:15:32.89:272,33,0	1/1:3,19:22:50.99:443,51,0	1/1:0,20:20:53.99:469,54,0	1/1:2,21:23:59.99:521,60,0	0/0:22,0:22:54.10:0,54,572	0/0:15,0:15:45.10:0,45,483	0/0:35,1:36:70.07:0,70,984	1/1:1,16:17:47.99:417,48,0	0/0:21,2:24:4.86:0,5,479	0/0:20,1:21:25.08:0,25,495	1/1:3,20:23:23.80:435,24,0	1/1:5,22:27:65.97:573,66,0	1/1:0,19:19:35.78:312,36,0	1/1:2,27:29:77.98:677,78,0	0/0:15,0:15:36.10:0,36,398	1/1:4,23:27:62.91:533,63,0	1/1:6,23:29:68.97:599,69,0	1/1:1,10:12:32.03:266,32,0
chr10	7699725	.	CAACT	C	18926.12	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=4.478;DP=479;FS=3.514;HRun=0;HaplotypeScore=126.7350;InbreedingCoeff=0.9588;MQ=93.60;MQ0=1;MQRankSum=-10.835;QD=47.79;ReadPosRankSum=5.240;VQSLOD=5.6653;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:84.29:0,84,2295	1/1:2,8:10:18.06:349,18,0	0/0:21,0:21:60.20:0,60,1478	0/0:32,0:32:84.27:0,84,2076	1/1:2,15:17:39.13:734,39,0	1/1:0,12:12:30.10:581,30,0	1/1:0,17:17:51.17:988,51,0	1/1:0,29:29:84.23:1532,84,0	1/1:0,16:16:42.14:814,42,0	1/1:1,19:20:57.20:1105,57,0	1/1:1,18:19:39.13:734,39,0	1/1:0,16:16:48.16:929,48,0	1/1:1,15:16:36.12:672,36,0	1/1:3,15:18:42.14:814,42,0	1/1:0,13:13:39.13:756,39,0	1/1:0,12:12:36.12:697,36,0	1/1:0,10:10:30.10:576,30,0	1/1:1,15:16:42.14:814,42,0	1/1:4,12:15:30.10:563,30,0	1/1:1,11:12:27.09:523,27,0	1/1:1,10:11:24.08:444,24,0	1/1:1,20:21:60.21:1162,60,0	1/1:1,11:12:26.76:523,27,0	1/1:3,21:24:42.04:792,42,0	1/1:0,14:14:33.11:635,33,0	1/1:2,19:21:57.15:1048,57,0	1/1:0,19:19:54.18:1025,54,0	1/1:1,4:5:6.02:116,6,0
chr10	7699784	.	AGC	A	200.30	PASS	AB=0.865;AC=15;AF=0.268;AN=56;BaseQRankSum=3.358;DP=280;FS=10.132;HRun=0;HaplotypeScore=164.4589;InbreedingCoeff=-0.2183;MQ=40.56;MQ0=13;MQRankSum=-3.054;QD=1.62;ReadPosRankSum=-0.736;VQSLOD=2.0841;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:23:56.85:0,57,724	0/1:6,2:6:31.48:31,0,33	0/0:12,0:9:27.07:0,27,325	0/0:11,0:8:21.05:0,21,248	0/1:4,1:4:9.12:22,0,9	0/0:4,1:5:5.15:0,5,59	0/0:13,0:12:30.29:0,30,241	0/0:13,0:9:23.10:0,23,157	0/1:8,1:8:37.85:38,0,86	0/1:12,2:14:26.40:26,0,199	0/1:8,0:8:10.04:10,0,72	0/1:8,2:9:34.33:34,0,106	0/0:10,0:10:29.84:0,30,224	0/0:9,0:9:21.55:0,22,180	0/1:4,5:9:60.26:70,0,60	0/1:9,2:11:6.59:7,0,149	0/0:10,0:9:26.46:0,26,189	0/1:10,1:11:24.77:25,0,130	0/0:16,0:15:37.20:0,37,227	1/1:0,1:1:2.97:20,3,0	0/1:10,0:7:0.84:1,0,71	0/0:5,0:5:7.69:0,8,58	0/1:7,2:9:41.43:41,0,91	0/0:12,1:12:3.62:0,4,121	0/1:5,2:7:5.27:5,0,76	0/1:12,0:12:16.12:16,0,138	0/0:14,0:13:37.23:0,37,256	0/0:1,0:1:2.99:0,3,24
chr10	7699787	.	AGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAG	A	5604.06	PASS	AB=0.909;AC=25;AF=0.446;AN=56;BaseQRankSum=9.136;DP=250;FS=10.114;HRun=0;HaplotypeScore=266.5233;InbreedingCoeff=-0.1302;MQ=39.54;MQ0=13;MQRankSum=-5.233;QD=33.56;ReadPosRankSum=10.601;VQSLOD=1.4618;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:21:50.80:0,51,787	0/1:6,2:6:14.04:478,0,14	0/0:9,0:7:21.06:0,21,262	0/0:8,0:5:15.05:0,15,207	1/1:4,1:4:3.01:220,3,0	0/1:3,1:4:35.77:246,0,36	0/1:13,0:12:85.35:130,0,85	0/0:11,0:7:20.63:0,21,141	0/1:6,0:6:7.68:268,0,8	0/1:11,0:13:29.74:491,0,30	0/1:6,0:6:10.26:10,0,42	0/1:7,0:8:9.01:460,0,9	0/1:10,0:10:27.11:60,0,27	0/1:9,0:9:10.94:11,0,56	1/1:4,5:9:16.49:1220,16,0	1/1:9,1:11:4.03:696,4,0	0/1:10,0:9:42.69:43,0,76	1/1:8,0:9:25.94:378,26,0	0/1:14,0:13:3.09:3,0,185	1/1:0,1:1:3.01:222,3,0	0/0:9,0:6:7.07:0,7,35	0/1:3,0:3:5.83:6,0,17	0/1:5,0:7:60.23:198,0,60	0/1:11,0:11:60.01:230,0,60	0/1:5,2:7:34.44:236,0,34	0/0:9,0:9:16.43:0,16,103	0/0:14,0:13:30.46:0,30,195	0/0:1,0:1:2.99:0,3,24
chr10	7700138	.	TG	T	249.13	PASS	AB=0.756;AC=8;AF=0.143;AN=56;BaseQRankSum=5.577;DP=491;FS=2.267;HRun=1;HaplotypeScore=125.1145;InbreedingCoeff=-0.1835;MQ=50.17;MQ0=26;MQRankSum=-5.060;QD=2.09;ReadPosRankSum=2.241;VQSLOD=-0.4599;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:45:99:0,99,1289	0/0:7,0:7:12.51:0,13,158	0/0:28,0:7:18.94:0,19,212	0/0:35,0:14:41.90:0,42,485	0/0:28,0:27:24.53:0,25,306	0/0:14,0:14:34.35:0,34,447	0/0:33,0:31:53.65:0,54,729	0/0:18,0:18:51.01:0,51,650	0/0:13,0:13:14.07:0,14,167	0/1:11,3:14:31.61:32,0,210	0/1:7,4:11:23.10:51,0,23	0/1:10,4:16:66.78:67,0,117	0/1:9,2:12:35.46:35,0,60	0/1:7,4:13:20.72:63,0,21	0/0:17,0:15:11.88:0,12,149	0/0:6,0:6:3.01:0,3,38	0/0:17,0:16:33.10:0,33,418	0/1:8,3:10:58.07:58,0,91	0/0:7,0:5:15.05:0,15,198	0/0:14,0:14:21.06:0,21,265	0/0:31,0:30:21.47:0,21,246	0/1:8,2:11:15.47:15,0,66	0/0:9,2:10:5.81:0,6,72	0/1:20,8:26:61.58:62,0,118	0/0:17,0:17:21.54:0,22,293	0/0:11,0:12:20.07:0,20,312	0/0:9,0:9:13.75:0,14,166	0/0:6,0:5:15.05:0,15,188
chr10	7700140	.	TGTGTTGG	T	1914.07	PASS	AB=0.972;AC=23;AF=0.411;AN=56;BaseQRankSum=3.941;DP=492;FS=3.712;HRun=0;HaplotypeScore=153.1019;InbreedingCoeff=0.2219;MQ=50.55;MQ0=26;MQRankSum=-5.322;QD=7.20;ReadPosRankSum=-1.196;VQSLOD=2.0514;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:44:77.06:0,77,2292	0/0:7,0:7:11.74:0,12,158	0/0:27,0:7:19.88:0,20,368	0/0:34,0:13:39.04:0,39,700	0/1:27,0:26:46.61:47,0,115	0/0:15,0:15:29.42:0,29,263	0/0:35,0:33:40.75:0,41,445	0/0:18,0:18:35.36:0,35,344	0/1:12,0:12:8:8,0,160	0/1:14,2:15:4.90:206,0,5	1/1:8,3:11:2.74:68,3,0	1/1:15,3:17:29.12:415,29,0	1/1:9,2:11:11.35:280,11,0	1/1:9,4:13:17.43:270,17,0	0/1:17,0:15:1.70:2,0,60	0/1:5,0:5:0.45:8,0,0	0/0:19,0:18:8.63:0,9,345	0/1:9,3:11:11.99:147,0,12	0/0:8,0:6:15.59:0,16,174	0/1:14,0:14:19.69:20,0,151	0/1:32,0:30:3.32:67,0,3	1/1:9,2:11:5.22:152,5,0	0/0:10,1:10:6.07:0,6,25	1/1:22,7:26:7.60:240,8,0	0/1:17,0:17:10.93:11,0,192	0/1:11,0:11:31.53:91,0,32	0/1:10,0:9:19.86:60,0,20	0/0:6,0:5:9.86:0,10,30
chr10	7700145	.	TGG	T	5457.02	PASS	AB=0.885;AC=50;AF=0.893;AN=56;BaseQRankSum=6.412;DP=429;FS=7.101;HRun=9;HaplotypeScore=105.7814;InbreedingCoeff=0.6058;MQ=58.55;MQ0=20;MQRankSum=-1.013;QD=15.33;ReadPosRankSum=0.116;VQSLOD=2.6933;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:38:85.42:0,85,1285	1/1:4,4:8:8.48:76,8,0	0/1:22,0:8:5.29:5,0,287	0/0:32,0:16:26.68:0,27,571	1/1:6,11:16:23.05:241,23,0	1/1:8,5:13:24:275,24,0	1/1:8,16:22:29.09:346,29,0	1/1:3,10:13:30.09:349,30,0	0/1:7,3:10:2.28:29,0,2	1/1:3,7:10:30.09:348,30,0	1/1:5,8:13:8.98:88,9,0	1/1:7,8:15:23.84:262,24,0	1/1:6,7:13:21.01:237,21,0	1/1:7,4:11:15.04:168,15,0	1/1:3,10:13:17.98:191,18,0	1/1:0,3:3:6.02:68,6,0	1/1:12,6:17:33.59:341,34,0	1/1:6,4:9:15.03:173,15,0	1/1:3,3:5:9.02:105,9,0	1/1:3,12:15:21:224,21,0	1/1:4,23:26:27.05:308,27,0	1/1:4,9:13:17.98:207,18,0	1/1:4,7:10:6.02:70,6,0	1/1:15,15:28:36.08:412,36,0	1/1:10,5:15:16.70:201,17,0	1/1:3,9:12:33.10:383,33,0	1/1:2,6:8:15.04:174,15,0	1/1:1,5:5:15.04:175,15,0
chr10	7700274	.	G	GT	15486.79	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=-1.565;DP=622;FS=2.455;HRun=4;HaplotypeScore=105.3588;InbreedingCoeff=0.9991;MQ=79.82;MQ0=0;MQRankSum=-2.915;QD=34.72;ReadPosRankSum=1.722;VQSLOD=4.6827;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,147,1656	1/1:1,15:16:45.15:616,45,0	0/0:18,0:18:54.13:0,54,595	0/0:29,0:29:54.19:0,54,696	1/1:0,18:18:48.16:648,48,0	1/1:0,15:14:36.12:492,36,0	1/1:1,30:31:75.21:1005,75,0	1/1:7,35:42:99:1379,105,0	1/1:0,14:14:39.13:533,39,0	1/1:2,19:21:57.19:777,57,0	1/1:0,11:11:33.11:451,33,0	1/1:0,17:17:51.17:698,51,0	1/1:2,14:16:38.97:527,39,0	1/1:3,20:23:57.19:779,57,0	1/1:1,22:23:60.20:820,60,0	1/1:0,13:13:36.12:492,36,0	1/1:1,39:39:96.85:1349,97,0	1/1:0,9:9:21.07:287,21,0	1/1:3,12:15:36.12:492,36,0	1/1:4,14:18:42.14:569,42,0	0/0:27,0:27:72.19:0,72,807	1/1:1,24:25:66.22:903,66,0	1/1:0,19:19:54.18:739,54,0	1/1:1,38:39:96.32:1313,96,0	1/1:3,18:21:45.15:616,45,0	0/0:15,0:15:45.12:0,45,502	0/0:19,0:19:54.13:0,54,600	0/0:13,0:13:36.10:0,36,408
chr10	7700952	.	T	TGA	5678.88	PASS	AB=0.600;AC=15;AF=0.268;AN=56;BaseQRankSum=2.300;DP=640;FS=7.756;HRun=0;HaplotypeScore=111.6718;InbreedingCoeff=0.9072;MQ=77.63;MQ0=2;MQRankSum=-2.156;QD=33.41;ReadPosRankSum=0.789;VQSLOD=7.1029;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,129,1523	0/1:4,8:12:9.85:364,0,10	0/0:40,0:36:50.26:0,50,607	0/0:37,0:29:27.74:0,28,411	0/0:14,0:14:32.45:0,32,377	1/1:2,12:15:24.08:392,24,0	1/1:3,21:24:57.19:930,57,0	0/0:26,0:27:57.14:0,57,659	1/1:8,19:28:63.17:993,63,0	0/0:13,0:13:30.05:0,30,352	0/0:23,0:23:54.14:0,54,640	0/0:8,0:8:18.06:0,18,222	0/0:25,0:25:11.21:0,11,606	0/0:16,0:16:45.13:0,45,541	0/0:19,0:19:45.14:0,45,554	0/0:21,0:21:42.13:0,42,517	1/1:2,24:27:60.20:963,60,0	0/0:17,0:17:33.10:0,33,406	1/1:11,15:26:48.15:755,48,0	1/1:4,20:24:20.26:842,20,0	0/0:22,0:22:39.12:0,39,480	0/0:31,0:31:69.20:0,69,831	0/0:14,0:14:36.11:0,36,443	0/0:32,0:32:69.21:0,69,849	1/1:5,9:14:27.09:441,27,0	0/0:26,0:26:60.19:0,60,738	0/0:28,0:28:60.17:0,60,724	0/0:6,0:6:18.06:0,18,222
chr10	7701356	.	G	GTA	7258.75	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-13.478;DP=681;FS=14.843;HRun=0;HaplotypeScore=100.5518;InbreedingCoeff=0.9651;MQ=61.56;MQ0=6;MQRankSum=-0.131;QD=34.90;ReadPosRankSum=4.293;VQSLOD=6.2306;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:63.19:0,63,803	0/0:10,0:10:30.10:0,30,390	0/0:19,0:16:19.15:0,19,220	0/0:14,0:7:10.85:0,11,118	0/0:30,0:30:84.15:0,84,1024	0/0:20,0:20:57.16:0,57,711	0/0:17,0:17:30.10:0,30,389	0/0:45,0:43:99:0,108,1308	0/0:14,0:14:42.12:0,42,530	1/1:10,33:41:99:1851,114,0	1/1:2,26:27:45.15:765,45,0	1/1:3,18:20:3.17:624,3,0	1/1:6,25:32:57.20:965,57,0	1/1:3,18:22:45.15:760,45,0	0/0:32,0:32:87.22:0,87,1070	0/0:29,0:29:81.17:0,81,964	0/0:34,0:34:85.70:0,86,1025	1/1:4,10:14:36.12:611,36,0	0/0:15,0:14:42.10:0,42,500	0/0:28,0:28:75.22:0,75,945	0/0:36,0:36:99:0,105,1318	1/1:1,18:18:33.11:561,33,0	1/1:3,14:17:42.14:714,42,0	1/1:2,10:12:24.08:408,24,0	0/0:33,0:33:87.28:0,87,1130	0/0:35,0:35:90.29:0,90,1170	0/0:25,0:25:66.21:0,66,857	0/0:8,0:8:24.05:0,24,295
chr10	7701491	.	G	GATGT	4698.54	PASS	AB=0.846;AC=29;AF=0.537;AN=54;BaseQRankSum=-7.260;DP=450;FS=59.011;HRun=0;HaplotypeScore=134.0451;InbreedingCoeff=-0.4630;MQ=62.00;MQ0=11;MQRankSum=-0.116;QD=13.90;ReadPosRankSum=-9.284;VQSLOD=-0.2259;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:13,0:15:7.64:8,0,113	0/1:5,1:6:65.80:66,0,84	0/0:36,0:17:25.34:0,25,524	0/0:54,0:15:22.15:0,22,233	0/0:17,0:17:1.17:0,1,23	0/1:3,1:5:5.36:172,0,5	0/1:3,0:3:16.84:40,0,17	./.	0/1:10,0:10:31.50:31,0,58	0/1:27,1:30:99:424,0,201	0/1:20,2:26:93.01:550,0,93	0/1:20,2:23:99:326,0,103	0/1:19,1:23:53.30:360,0,53	1/1:6,4:10:18:363,18,0	0/1:3,3:6:20.87:74,0,21	0/1:17,3:20:99:343,0,199	0/1:20,0:21:42.03:69,0,42	0/1:14,0:15:41.97:248,0,42	1/1:8,0:6:6.47:54,6,0	1/1:14,0:14:1.08:2,1,0	1/1:9,5:16:0.12:76,0,0	0/1:8,5:14:87.34:423,0,87	0/1:10,0:12:0.99:120,0,1	0/1:10,1:13:58.30:86,0,58	0/1:5,3:9:28.09:75,0,28	0/1:8,5:14:39.74:527,0,40	0/1:16,0:16:14.66:93,0,15	1/1:5,2:6:9.03:168,9,0
chr10	7701546	.	GTA	G	295.63	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.460;DP=641;FS=6.711;HRun=0;HaplotypeScore=138.2711;InbreedingCoeff=0.8240;MQ=61.39;MQ0=7;MQRankSum=1.613;QD=18.48;ReadPosRankSum=0.832;VQSLOD=3.7821;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,16:16:29.99:390,30,0	0/0:4,0:4:12.04:0,12,204	0/0:12,0:5:9:0,9,115	0/0:18,0:9:5.29:0,5,49	0/0:23,0:23:32.97:0,33,561	0/0:13,0:13:36.12:0,36,610	0/0:15,0:15:39.13:0,39,663	0/0:69,0:65:99:0,150,2446	0/0:20,0:20:60.21:0,60,1020	0/0:34,0:34:99:0,99,1528	0/0:33,0:33:69.15:0,69,1098	0/0:25,0:25:60.12:0,60,1020	0/0:28,0:28:66.10:0,66,1046	0/0:22,0:21:60.17:0,60,980	0/0:24,0:24:63.19:0,63,1053	0/0:22,0:22:66.21:0,66,1095	0/0:30,0:29:51.17:0,51,849	0/0:27,0:27:75.26:0,75,1249	0/0:18,0:14:42.14:0,42,715	0/0:26,0:26:44.92:0,45,765	0/0:16,0:16:30.10:0,30,510	0/0:18,0:18:49.98:0,50,776	0/0:24,0:24:57.18:0,57,904	0/0:15,0:15:30.08:0,30,510	0/0:16,0:16:39.13:0,39,659	0/0:30,0:29:87.25:0,87,1420	0/0:31,0:31:57.18:0,57,937	0/0:10,0:10:27.09:0,27,457
chr10	7701907	.	TG	T	8015.51	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=13.298;DP=592;FS=2.709;HRun=2;HaplotypeScore=61.9565;InbreedingCoeff=0.9972;MQ=68.75;MQ0=1;MQRankSum=0.402;QD=39.49;ReadPosRankSum=0.924;VQSLOD=5.3279;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:90.31:0,90,1425	0/0:8,0:8:24.07:0,24,361	0/0:20,0:18:48.16:0,48,757	0/0:20,0:18:46.80:0,47,711	0/0:20,0:20:57.19:0,57,911	0/0:19,0:19:57.19:0,57,911	0/0:25,0:25:75.26:0,75,1199	0/0:24,0:24:72.23:0,72,1130	0/0:25,0:25:75.23:0,75,1169	1/1:0,18:18:54.14:717,54,0	1/1:0,26:26:66.22:923,66,0	1/1:0,15:15:45.15:629,45,0	1/1:0,31:31:90.30:1258,90,0	1/1:0,20:20:57.19:797,57,0	0/0:17,0:17:51.16:0,51,792	0/0:20,0:20:60.20:0,60,955	0/0:29,0:29:81.28:0,81,1295	1/1:2,17:19:37.19:714,37,0	0/0:20,0:19:54.18:0,54,860	0/0:21,0:21:60.19:0,60,935	0/0:31,0:31:93.32:0,93,1482	1/1:0,25:25:72.24:1006,72,0	1/1:0,20:20:57.19:797,57,0	1/1:0,29:29:84.28:1175,84,0	0/0:20,0:20:60.20:0,60,959	0/0:18,0:18:51.16:0,51,794	0/0:17,0:17:51.17:0,51,815	0/0:5,0:5:15.05:0,15,240
chr10	7703564	.	CAGCCTGGAA	C	4259.32	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=0.079;DP=646;FS=2.580;HRun=0;HaplotypeScore=228.9315;InbreedingCoeff=0.9403;MQ=80.94;MQ0=0;MQRankSum=-9.984;QD=56.79;ReadPosRankSum=3.092;VQSLOD=4.6661;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,126,4856	0/0:7,0:7:21.07:0,21,787	0/0:21,0:21:60.21:0,60,2599	0/0:17,0:17:12.34:0,12,1410	0/0:28,0:28:75.20:0,75,2318	0/0:21,0:21:63.22:0,63,2540	0/0:32,0:32:96.33:0,96,3856	0/0:33,0:33:86.33:0,86,2699	0/0:27,0:27:78.24:0,78,2921	0/0:21,0:21:63.21:0,63,2720	0/0:12,0:12:36.12:0,36,1751	0/0:20,0:20:60.21:0,60,2803	0/0:27,0:27:81.28:0,81,3800	0/0:27,0:27:78.27:0,78,3657	0/0:26,0:26:72.25:0,72,2356	0/0:21,0:21:60.21:0,60,2083	0/0:32,0:32:93.32:0,93,3786	0/0:25,0:25:72.25:0,72,3469	0/0:26,0:26:69.16:0,69,2277	0/0:25,0:25:75.26:0,75,2911	1/1:7,21:28:30.02:930,30,0	0/0:14,0:14:42.14:0,42,1985	0/0:23,0:23:66.22:0,66,2722	0/0:29,0:29:87.30:0,87,4148	0/0:15,0:15:39.13:0,39,1445	1/1:2,18:20:54.18:1561,54,0	1/1:1,23:24:54.19:1675,54,0	1/1:2,1:3:3.01:93,3,0
chr10	7704047	.	TA	T	9929.54	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=13.213;DP=664;FS=2.209;HRun=9;HaplotypeScore=68.1599;InbreedingCoeff=0.9941;MQ=79.17;MQ0=0;MQRankSum=-2.941;QD=23.64;ReadPosRankSum=2.198;VQSLOD=5.8472;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,16:18:41.94:373,42,0	1/1:1,11:12:30.01:274,30,0	0/0:22,1:24:17.63:0,18,434	0/0:11,0:11:12.03:0,12,132	1/1:2,25:27:65.98:597,66,0	1/1:1,33:35:98.09:884,98,0	1/1:1,22:23:57.03:522,57,0	1/1:2,27:29:80.97:722,81,0	1/1:2,24:26:69.04:631,69,0	0/0:35,0:36:68.93:0,69,986	0/0:26,0:26:66.16:0,66,732	0/0:20,0:20:60.15:0,60,671	0/0:18,0:18:51.10:0,51,573	0/0:25,0:25:66.20:0,66,761	1/1:2,27:29:78.03:714,78,0	1/1:1,22:23:63.03:577,63,0	1/1:0,9:10:29.05:253,29,0	0/0:18,0:18:48.08:0,48,527	1/1:2,21:23:60.03:549,60,0	1/1:2,27:29:80.90:716,81,0	1/1:0,19:20:53.07:473,53,0	0/0:24,0:24:63.16:0,63,708	0/0:25,0:25:66.20:0,66,762	0/0:17,0:17:48.14:0,48,554	1/1:3,28:31:84.04:769,84,0	1/1:5,32:37:64.43:844,64,0	1/1:1,27:28:69.04:631,69,0	1/1:2,18:20:46.89:401,47,0
chr10	7705106	.	GT	G	2964.56	PASS	AB=0.528;AC=7;AF=0.125;AN=56;BaseQRankSum=10.702;DP=648;FS=3.216;HRun=3;HaplotypeScore=61.3048;InbreedingCoeff=0.8136;MQ=57.53;MQ0=4;MQRankSum=2.153;QD=31.88;ReadPosRankSum=2.384;VQSLOD=3.9580;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,156,2275	0/0:6,0:6:18.06:0,18,270	0/0:14,0:10:27.09:0,27,389	0/0:30,0:27:81.22:0,81,1111	0/0:17,0:17:51.17:0,51,764	0/0:19,0:18:54.17:0,54,790	0/0:19,0:19:57.19:0,57,854	0/0:18,0:18:54.18:0,54,809	0/0:18,0:18:54.18:0,54,809	0/0:27,0:26:78.26:0,78,1152	0/0:15,0:15:42.13:0,42,609	0/0:29,0:29:87.29:0,87,1304	0/0:25,0:25:72.24:0,72,1061	0/0:25,0:25:75.22:0,75,1078	0/0:20,0:20:60.19:0,60,878	0/0:24,0:24:69.23:0,69,1033	0/0:31,0:31:93.32:0,93,1393	0/0:34,0:34:99:0,102,1500	0/0:33,0:29:87.29:0,87,1285	0/0:18,0:18:54.18:0,54,809	1/1:0,35:35:90.29:1169,90,0	0/0:16,0:16:48.15:0,48,698	0/0:21,0:21:60.20:0,60,898	0/0:24,0:24:69.23:0,69,1029	0/0:18,0:18:54.17:0,54,790	0/1:3,25:28:50.41:888,0,50	1/1:0,26:26:72.11:935,72,0	1/1:0,4:4:9.03:117,9,0
chr10	7707061	.	AGT	A	600.41	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=13.331;DP=706;FS=9.446;HRun=0;HaplotypeScore=106.4940;InbreedingCoeff=0.8069;MQ=61.27;MQ0=0;MQRankSum=-0.103;QD=5.66;ReadPosRankSum=2.727;VQSLOD=2.2218;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:93.32:0,93,1777	0/0:4,0:4:12.04:0,12,232	0/0:41,0:36:99:0,99,1823	0/0:32,0:30:64.67:0,65,1389	0/0:20,0:20:56.87:0,57,1062	0/0:22,0:22:66.23:0,66,1252	0/0:24,0:24:69.24:0,69,1333	0/0:24,0:24:66.23:0,66,1274	0/0:19,0:19:57.18:0,57,1056	0/0:42,0:42:99:0,123,2373	0/0:23,0:23:66.21:0,66,1232	0/0:27,0:27:78.27:0,78,1507	0/0:33,0:33:99:0,99,1872	0/0:22,0:22:66.23:0,66,1275	0/0:35,0:35:99:0,105,2019	0/0:24,0:24:72.25:0,72,1382	0/0:22,0:22:66.23:0,66,1275	0/0:15,0:15:39.13:0,39,741	0/0:18,0:17:51.17:0,51,981	0/0:30,0:30:90.31:0,90,1720	1/1:26,0:26:54.35:311,54,0	0/0:37,0:37:99:0,108,2029	0/0:20,0:20:57.20:0,57,1100	0/0:14,0:14:39.13:0,39,753	0/0:19,0:19:57.20:0,57,1101	0/1:31,0:31:99:114,0,116	1/1:36,0:36:51.64:294,52,0	1/1:9,4:13:8.87:24,9,0
chr10	7707062	.	G	GA	2897.11	PASS	AB=0.525;AC=7;AF=0.125;AN=56;BaseQRankSum=15.107;DP=705;FS=4.238;HRun=1;HaplotypeScore=84.3887;InbreedingCoeff=0.8278;MQ=61.31;MQ0=0;MQRankSum=-2.713;QD=26.83;ReadPosRankSum=2.019;VQSLOD=3.6124;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:93.28:0,93,1279	0/0:4,0:4:12.04:0,12,168	0/0:39,0:34:99:0,99,1297	0/0:33,0:31:61.92:0,62,981	0/0:21,0:21:56.77:0,57,776	0/0:22,0:22:66.22:0,66,919	0/0:24,0:24:69.23:0,69,965	0/0:23,0:23:66.22:0,66,923	0/0:19,0:19:57.15:0,57,760	0/0:42,0:42:99:0,123,1720	0/0:24,0:24:66.21:0,66,905	0/0:26,0:26:78.26:0,78,1091	0/0:33,0:33:99:0,99,1344	0/0:22,0:22:66.22:0,66,923	0/0:35,0:35:99:0,105,1466	0/0:24,0:24:72.24:0,72,1006	0/0:22,0:22:66.22:0,66,923	0/0:14,0:14:39.13:0,39,545	0/0:18,0:17:51.17:0,51,712	0/0:31,0:31:90.28:0,90,1240	1/1:5,22:27:78.05:833,78,0	0/0:37,0:37:99:0,108,1488	0/0:19,0:19:57.19:0,57,797	0/0:13,0:13:39.13:0,39,545	0/0:19,0:19:57.19:0,57,797	0/1:3,28:31:32.59:886,0,33	1/1:5,32:37:99:1069,101,0	1/1:5,8:13:24.53:257,25,0
chr10	7707063	.	T	TA	3004.44	PASS	AB=0.533;AC=7;AF=0.125;AN=56;BaseQRankSum=15.129;DP=710;FS=4.115;HRun=0;HaplotypeScore=84.5128;InbreedingCoeff=0.8278;MQ=61.16;MQ0=0;MQRankSum=0.126;QD=26.83;ReadPosRankSum=1.603;VQSLOD=4.3737;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:93.31:0,93,1293	0/0:4,0:4:12.04:0,12,168	0/0:38,0:33:93.29:0,93,1257	0/0:31,1:31:73.19:0,73,1035	0/0:21,0:21:56.79:0,57,775	0/0:22,0:22:66.22:0,66,921	0/0:24,0:24:69.23:0,69,965	0/0:24,0:24:66.22:0,66,923	0/0:19,0:19:54.18:0,54,754	0/0:41,0:41:99:0,123,1720	0/0:23,0:23:66.19:0,66,889	0/0:26,0:26:78.26:0,78,1091	0/0:34,0:34:99:0,99,1380	0/0:22,0:22:66.22:0,66,923	0/0:35,0:35:99:0,105,1468	0/0:24,0:24:72.24:0,72,1007	0/0:22,0:22:66.22:0,66,923	0/0:14,0:14:39.13:0,39,543	0/0:18,0:17:51.17:0,51,713	0/0:32,0:32:93.28:0,93,1266	1/1:5,22:27:76.69:837,77,0	0/0:37,0:37:99:0,108,1488	0/0:20,0:20:57.19:0,57,796	0/0:13,0:13:39.13:0,39,545	0/0:19,0:19:57.19:0,57,797	0/1:4,28:32:29.67:900,0,30	1/1:8,32:40:99:1158,111,0	1/1:5,8:13:24.06:257,24,0
chr10	7707193	.	G	GA	15602.09	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-17.989;DP=737;FS=1.899;HRun=8;HaplotypeScore=82.0405;InbreedingCoeff=0.9823;MQ=62.76;MQ0=2;MQRankSum=-0.897;QD=28.32;ReadPosRankSum=3.372;VQSLOD=5.0778;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,29:33:87.26:1004,87,0	1/1:2,13:16:38.95:430,39,0	0/0:18,0:16:37.26:0,37,332	0/0:16,0:15:29.81:0,30,274	0/0:2,0:43:81.48:0,81,239	1/1:6,21:27:8.39:603,8,0	1/1:1,18:19:42.12:485,42,0	0/0:5,0:42:62.93:0,63,192	1/1:1,20:22:60.01:672,60,0	1/1:6,32:38:99:1129,99,0	1/1:3,21:24:60.14:678,60,0	1/1:0,34:34:93.28:1073,93,0	1/1:1,24:25:68.99:796,69,0	1/1:2,18:20:54.16:623,54,0	0/0:2,0:40:73.33:0,73,216	0/0:0,0:26:46.75:0,47,138	1/1:3,20:23:38.73:694,39,0	1/1:3,13:16:14.68:423,15,0	1/1:6,17:22:54.09:606,54,0	1/1:4,37:42:86.71:1233,87,0	1/1:5,28:33:51.92:839,52,0	1/1:1,19:21:57:638,57,0	1/1:3,23:26:63.19:727,63,0	1/1:3,16:19:45.13:519,45,0	1/1:1,20:21:54.16:623,54,0	1/1:7,27:34:56.78:907,57,0	1/1:5,21:26:57.17:658,57,0	1/1:1,8:9:21.06:241,21,0
chr10	7707935	.	CCT	C	318.33	PASS	AB=0.974;AC=12;AF=0.222;AN=54;BaseQRankSum=0.620;DP=536;FS=8.278;HRun=0;HaplotypeScore=89.2185;InbreedingCoeff=0.4744;MQ=76.30;MQ0=16;MQRankSum=-0.037;QD=2.21;ReadPosRankSum=2.975;VQSLOD=1.0775;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:26,7:31:8.81:78,9,0	0/0:14,0:14:3.89:0,4,43	0/0:27,0:24:0.47:0,0,1	./.	1/1:9,2:12:8.87:97,9,0	0/1:17,1:18:20.67:21,0,73	0/0:17,0:23:21:0,21,198	1/1:27,0:27:2.94:18,3,0	0/0:10,0:15:5.95:0,6,52	0/0:21,0:19:15:0,15,152	0/0:8,0:9:3:0,3,25	0/0:19,0:22:8.98:0,9,74	0/0:20,0:20:2.80:0,3,26	0/0:14,0:18:11.98:0,12,99	1/1:12,7:19:14.62:139,15,0	1/1:8,0:20:19.89:98,20,0	0/0:13,0:24:15.02:0,15,161	0/0:3,0:5:8.99:0,9,74	0/0:17,0:16:8.94:0,9,103	0/1:15,0:15:22.42:22,0,170	0/0:14,0:14:2.98:0,3,21	0/0:15,0:16:9:0,9,84	0/0:17,0:20:5.83:0,6,50	0/0:17,0:17:14.99:0,15,151	0/0:15,0:15:15.46:0,15,129	0/0:19,0:27:38.90:0,39,407	0/0:12,0:20:8.94:0,9,67	0/0:13,0:12:2.97:0,3,20
chr10	7710641	.	CGTGTGTGT	C	2249.58	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=2.467;DP=604;FS=0.000;HRun=0;HaplotypeScore=150.1844;InbreedingCoeff=0.8114;MQ=66.42;MQ0=14;MQRankSum=-5.203;QD=13.23;ReadPosRankSum=0.266;VQSLOD=2.7403;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:33:24.04:0,24,533	1/1:10,4:16:14.72:269,15,0	0/0:22,0:16:3.01:0,3,54	0/0:22,0:17:3.01:0,3,43	0/0:11,0:19:5.05:0,5,111	1/1:14,13:28:24.08:480,24,0	1/1:11,6:18:9.49:179,9,0	0/0:32,0:31:21.02:0,21,383	1/1:9,13:22:12.04:261,12,0	0/0:15,0:19:24.08:0,24,660	0/0:10,0:18:14.68:0,15,403	0/0:16,0:21:21.07:0,21,558	0/0:14,0:24:25.33:0,25,732	0/0:12,0:21:12.04:0,12,346	0/0:11,0:20:22.79:0,23,607	0/0:9,0:19:15.05:0,15,433	1/1:14,4:17:6.02:147,6,0	0/0:11,0:15:24.06:0,24,729	1/1:11,1:12:3.01:75,3,0	1/1:22,16:39:22.13:779,22,0	0/0:17,0:14:3.01:0,3,105	0/0:18,0:28:23.78:0,24,639	0/0:11,0:17:17.90:0,18,529	0/0:22,0:32:42.14:0,42,1376	1/1:10,4:16:14.88:247,15,0	0/0:17,0:17:30.10:0,30,657	0/0:11,0:18:21.07:0,21,611	0/0:7,0:14:18.06:0,18,577
chr10	7710677	.	T	TGTGT	1869.59	PASS	AB=1.000;AC=35;AF=0.673;AN=52;BaseQRankSum=-5.882;DP=578;FS=0.000;HRun=0;HaplotypeScore=104.9696;InbreedingCoeff=0.0032;MQ=53.98;MQ0=19;MQRankSum=3.141;QD=4.14;ReadPosRankSum=-1.801;VQSLOD=1.0937;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:35,0:35:3.60:132,0,4	0/1:12,0:12:38.58:46,0,39	./.	./.	1/1:20,0:19:3.01:71,3,0	0/1:30,0:30:30.34:30,0,51	0/1:20,0:20:16.55:17,0,46	1/1:19,0:18:8.95:69,9,0	1/1:25,0:25:8.98:118,9,0	1/1:20,0:19:2.74:12,3,0	1/1:19,0:19:7.73:35,8,0	0/1:16,0:16:37.84:41,0,38	0/1:23,0:23:29.94:34,0,30	1/1:25,0:24:3.07:11,3,0	1/1:21,0:21:15.73:277,16,0	1/1:15,0:15:12.04:264,12,0	0/0:12,0:11:6.69:0,7,57	0/1:16,0:14:32.35:35,0,32	0/0:12,0:9:3:0,3,28	0/0:19,0:19:13.79:0,14,78	1/1:16,4:18:2.56:70,3,0	0/1:22,0:22:37.82:75,0,38	1/1:12,0:12:5.09:24,5,0	0/1:25,0:25:35.49:35,0,133	0/0:14,0:14:2.38:0,2,27	1/1:21,0:21:10.42:66,10,0	1/1:22,0:21:12.04:227,12,0	1/1:12,0:12:15.05:335,15,0
chr10	7711723	.	T	TAATA	1777.93	PASS	AB=1.000;AC=29;AF=0.725;AN=40;BaseQRankSum=-3.661;DP=210;FS=0.000;HRun=0;HaplotypeScore=40.3768;InbreedingCoeff=0.3390;MQ=52.15;MQ0=6;MQRankSum=0.571;QD=13.17;ReadPosRankSum=-1.267;VQSLOD=2.5661;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,0:6:2.05:44,2,0	1/1:1,2:3:6.02:142,6,0	./.	./.	1/1:5,1:6:3.01:71,3,0	1/1:6,4:10:9.03:213,9,0	./.	1/1:31,0:22:5.98:83,6,0	./.	0/0:7,0:9:3.89:0,4,30	0/0:12,0:12:0.47:0,0,1	./.	0/0:7,0:7:3:0,3,28	./.	1/1:4,2:6:6.02:142,6,0	1/1:3,1:4:3.01:71,3,0	1/1:10,11:21:27.09:637,27,0	0/1:4,0:8:5.97:6,0,97	1/1:9,1:9:3.01:71,3,0	1/1:5,2:7:6.02:142,6,0	./.	0/0:5,0:5:6.02:0,6,83	0/0:3,0:5:4.25:0,4,31	./.	1/1:4,2:6:3.01:71,3,0	1/1:8,0:8:3.01:52,3,0	1/1:4,0:4:6.02:102,6,0	1/1:5,0:5:3.01:52,3,0
chr10	7711829	.	AATTAGGC	A	2079.33	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=3.927;DP=192;FS=8.374;HRun=0;HaplotypeScore=50.0997;InbreedingCoeff=0.7850;MQ=78.11;MQ0=0;MQRankSum=-7.271;QD=59.41;ReadPosRankSum=-1.261;VQSLOD=2.0142;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:36.12:0,36,1380	0/0:2,0:2:6.02:0,6,240	0/0:6,0:6:18.06:0,18,673	0/0:4,0:4:9.03:0,9,253	1/1:1,11:12:30.10:729,30,0	0/0:8,0:8:24.08:0,24,960	0/0:4,0:4:12.04:0,12,480	1/1:0,16:13:39.12:955,39,0	0/0:3,0:3:9.01:0,9,264	0/0:7,0:7:21.07:0,21,839	0/0:9,0:9:24.08:0,24,960	0/0:3,0:3:9.03:0,9,360	0/0:2,0:2:6.02:0,6,240	0/0:3,0:3:9.03:0,9,360	1/1:0,3:3:9.03:234,9,0	1/1:0,4:4:12.04:312,12,0	0/0:16,0:16:48.14:0,48,1713	0/0:16,0:16:48.16:0,48,1846	0/0:12,0:12:30.10:0,30,1193	0/0:6,0:6:18.06:0,18,696	0/0:1,0:1:3.01:0,3,120	0/0:4,0:4:12.04:0,12,479	0/0:5,0:5:15.05:0,15,600	0/0:4,0:4:12.04:0,12,407	0/0:8,0:8:24.08:0,24,960	0/0:8,0:8:24.08:0,24,936	0/0:5,0:5:12.04:0,12,479	0/0:9,0:9:27.09:0,27,1018
chr10	7711943	.	TC	T	3047.90	PASS	AB=0.958;AC=36;AF=0.643;AN=56;BaseQRankSum=7.222;DP=242;FS=23.479;HRun=9;HaplotypeScore=28.1762;InbreedingCoeff=0.8052;MQ=74.92;MQ0=0;MQRankSum=0.549;QD=17.62;ReadPosRankSum=-0.197;VQSLOD=1.8657;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,15:19:36.01:328,36,0	1/1:0,2:2:6:55,6,0	0/1:10,0:9:0.30:0,0,70	0/1:10,1:7:8.69:20,0,9	1/1:0,4:4:11.97:102,12,0	1/1:0,5:5:12.01:110,12,0	1/1:1,6:7:15.01:137,15,0	1/1:7,18:25:53.96:481,54,0	1/1:0,6:6:18.01:165,18,0	0/0:6,0:6:18.05:0,18,208	0/0:7,0:7:15.04:0,15,173	0/0:10,0:10:27.07:0,27,302	0/0:6,0:6:15.04:0,15,173	0/0:9,0:9:24.05:0,24,262	1/1:1,8:10:26.04:225,26,0	1/1:3,9:12:30.01:274,30,0	1/1:1,7:8:21.01:192,21,0	0/0:7,0:7:18.03:0,18,189	1/1:2,11:13:32.99:296,33,0	1/1:1,5:6:9:82,9,0	1/1:0,9:9:24.01:220,24,0	0/0:7,0:7:21.06:0,21,242	0/0:11,0:11:33.10:0,33,381	0/0:6,0:6:9.03:0,9,104	1/1:1,7:8:18.01:165,18,0	1/1:2,11:13:32.99:292,33,0	1/1:1,3:4:9:82,9,0	1/1:0,1:1:3:27,3,0
chr10	7713051	.	G	GTT	14442.59	PASS	AB=0.696;AC=42;AF=0.750;AN=56;BaseQRankSum=-9.343;DP=673;FS=5.935;HRun=5;HaplotypeScore=107.5313;InbreedingCoeff=0.5671;MQ=45.37;MQ0=13;MQRankSum=5.291;QD=28.60;ReadPosRankSum=3.041;VQSLOD=3.8604;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,24:32:51.25:1071,51,0	1/1:1,6:8:18.02:278,18,0	0/0:56,0:16:35.58:0,36,388	0/0:54,0:20:48.11:0,48,588	1/1:7,18:25:12.81:672,13,0	1/1:3,18:21:19.19:577,19,0	1/1:2,8:9:12.04:210,12,0	0/1:27,15:35:22.33:713,0,22	1/1:1,11:12:30.07:493,30,0	0/1:5,23:26:5.10:1033,0,5	1/1:1,29:29:59.40:924,59,0	1/1:2,19:21:54.14:911,54,0	1/1:5,15:20:36.12:629,36,0	1/1:4,16:20:1.02:576,1,0	1/1:1,21:21:42.14:734,42,0	1/1:1,22:23:42.14:734,42,0	0/1:4,24:28:28.16:686,0,28	1/1:4,9:12:24.08:420,24,0	1/1:3,7:9:24.07:391,24,0	1/1:3,21:24:6.97:619,7,0	0/0:17,0:15:11.65:0,12,37	1/1:5,18:24:9.89:684,10,0	1/1:3,17:21:20.93:823,21,0	1/1:3,20:23:42.14:734,42,0	1/1:3,19:22:33.03:511,33,0	0/1:23,1:23:18.15:18,0,157	0/0:26,0:26:29.37:0,29,91	0/0:13,0:13:28.60:0,29,95
chr10	7713056	.	T	TG	2172.56	PASS	AB=0.564;AC=7;AF=0.125;AN=56;BaseQRankSum=-8.636;DP=657;FS=5.145;HRun=0;HaplotypeScore=142.7097;InbreedingCoeff=0.8172;MQ=48.01;MQ0=16;MQRankSum=-1.185;QD=28.22;ReadPosRankSum=-1.550;VQSLOD=2.8787;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:68.58:0,69,350	0/0:8,0:8:12.33:0,12,52	0/0:53,0:16:34.36:0,34,366	0/0:63,0:22:44.28:0,44,596	0/0:21,0:21:37.81:0,38,199	0/0:20,0:20:34.29:0,34,162	0/0:10,0:9:12.09:0,12,60	0/0:41,0:33:49.28:0,49,283	0/0:12,0:12:24.96:0,25,108	0/0:28,0:26:66.62:0,67,375	0/0:31,0:30:44.58:0,45,207	0/0:22,0:22:49.12:0,49,237	0/0:17,0:17:36.75:0,37,183	0/0:20,0:20:34.88:0,35,173	0/0:22,0:21:36.59:0,37,156	0/0:22,0:22:37.50:0,38,161	0/0:27,1:28:44.11:0,44,234	0/0:14,0:13:23.82:0,24,122	0/0:12,0:10:26.44:0,26,156	0/0:24,0:23:32.73:0,33,171	1/1:2,14:14:21:299,21,0	0/0:21,0:21:40.51:0,41,217	0/0:21,0:22:33.42:0,33,183	0/0:18,0:18:38.97:0,39,175	0/0:21,0:21:27.62:0,28,127	0/1:5,17:21:56.66:618,0,57	1/1:0,26:26:51.17:795,51,0	1/1:0,13:13:39.13:609,39,0
chr10	7713898	.	TTGCTCTGTAA	T	11235.83	PASS	AB=0.600;AC=17;AF=0.304;AN=56;BaseQRankSum=14.666;DP=594;FS=1.763;HRun=0;HaplotypeScore=184.0391;InbreedingCoeff=0.9059;MQ=57.76;MQ0=7;MQRankSum=-14.623;QD=72.96;ReadPosRankSum=2.393;VQSLOD=4.5125;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:90.31:0,90,4597	0/0:7,0:7:21.07:0,21,996	0/0:32,0:16:48.14:0,48,2153	0/0:33,0:24:44.48:0,44,2256	0/0:32,0:32:93.77:0,94,4489	0/0:31,0:31:93.32:0,93,4864	0/0:18,0:18:54.19:0,54,2857	0/0:33,0:33:96.31:0,96,4750	0/0:12,0:12:36.12:0,36,1767	1/1:3,21:24:60.05:1990,60,0	1/1:3,27:30:57.03:1850,57,0	1/1:0,8:8:18.06:607,18,0	1/1:1,12:13:33.11:1118,33,0	1/1:1,23:24:51.18:1727,51,0	0/0:18,0:18:54.19:0,54,2769	0/0:21,0:21:63.22:0,63,3349	0/0:22,0:22:66.21:0,66,3321	0/1:3,6:9:99:488,0,180	0/0:22,0:22:63.18:0,63,2936	0/0:21,0:21:63.22:0,63,3303	0/0:27,0:27:81.26:0,81,4166	1/1:0,17:17:45.15:1524,45,0	1/1:0,22:22:44.76:1524,45,0	1/1:2,5:7:12.04:407,12,0	0/0:18,0:18:54.19:0,54,2913	0/0:17,0:17:48.16:0,48,2522	0/0:38,0:38:99:0,114,5920	0/0:5,0:5:15.05:0,15,678
chr10	7714364	.	AGTTT	A	4352.50	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=12.110;DP=600;FS=0.939;HRun=0;HaplotypeScore=97.1367;InbreedingCoeff=0.9688;MQ=63.19;MQ0=0;MQRankSum=0.732;QD=46.30;ReadPosRankSum=3.370;VQSLOD=5.1733;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:63.22:0,63,1638	0/0:11,0:11:33.11:0,33,846	0/0:34,0:27:73.49:0,73,1823	0/0:17,0:17:42.11:0,42,1030	0/0:36,0:36:99:0,105,2763	0/0:17,0:17:48.15:0,48,1225	0/0:16,0:16:45.15:0,45,1193	0/0:19,0:19:54.19:0,54,1441	0/0:24,0:24:72.25:0,72,1867	0/0:27,0:27:78.27:0,78,2056	0/0:27,0:27:75.26:0,75,1918	0/0:13,0:13:33.11:0,33,880	0/0:20,0:20:54.19:0,54,1440	0/0:22,0:22:66.23:0,66,1732	0/0:12,0:12:33.11:0,33,880	0/0:15,0:15:42.13:0,42,1066	0/0:21,0:21:57.18:0,57,1464	0/0:25,0:24:67.47:0,67,1716	0/0:9,0:9:21.07:0,21,560	0/0:32,0:32:90.31:0,90,2400	1/1:3,19:22:51.17:952,51,0	0/0:19,0:19:57.20:0,57,1521	0/0:27,0:27:75.26:0,75,2000	0/0:21,0:21:54.19:0,54,1432	0/0:20,0:20:57.18:0,57,1461	1/1:0,31:30:87.30:1610,87,0	1/1:1,33:34:90.31:1679,90,0	1/1:0,7:7:6.02:112,6,0
chr10	7717753	.	CA	C	6567.51	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=11.017;DP=673;FS=12.683;HRun=2;HaplotypeScore=66.7913;InbreedingCoeff=0.9992;MQ=62.86;MQ0=0;MQRankSum=1.732;QD=37.53;ReadPosRankSum=1.510;VQSLOD=4.5264;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,105,1673	1/1:0,10:10:30.10:419,30,0	0/0:32,0:29:87.29:0,87,1374	0/0:25,0:23:69.20:0,69,1063	0/0:22,0:22:66.22:0,66,1043	1/1:0,27:27:78.26:1090,78,0	1/1:0,23:23:54.18:755,54,0	0/0:24,0:24:69.22:0,69,1059	1/1:0,21:21:54.18:755,54,0	0/0:33,0:33:99:0,99,1548	0/0:15,0:15:45.15:0,45,717	0/0:22,0:22:66.23:0,66,1055	0/0:36,0:36:99:0,108,1675	0/0:27,0:27:81.25:0,81,1270	0/0:20,0:20:57.18:0,57,888	0/0:23,0:23:69.21:0,69,1078	1/1:0,29:29:78.26:1089,78,0	0/0:13,0:13:39.13:0,39,621	1/1:1,14:15:45.14:615,45,0	1/1:0,32:32:87.29:1215,87,0	0/0:52,0:52:99:0,157,2471	0/0:16,0:16:48.16:0,48,767	0/0:14,0:14:42.14:0,42,665	0/0:20,0:20:60.20:0,60,955	1/1:0,18:18:45.15:629,45,0	0/0:33,0:33:96.30:0,96,1464	0/0:29,0:27:87.30:0,87,1387	0/0:7,0:7:21.07:0,21,336
chr10	7718565	.	TA	T	7375.07	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=8.604;DP=494;FS=1.520;HRun=3;HaplotypeScore=180.2530;InbreedingCoeff=0.9778;MQ=76.48;MQ0=1;MQRankSum=-14.797;QD=33.52;ReadPosRankSum=0.756;VQSLOD=3.9821;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:50.29:0,50,330	0/0:3,0:3:8.92:0,9,81	0/0:12,0:12:36.07:0,36,469	0/0:15,0:15:30.68:0,31,454	0/0:20,0:20:56.26:0,56,387	0/0:24,0:23:61.49:0,61,392	0/0:20,0:20:50.33:0,50,337	0/0:23,0:23:64.96:0,65,468	0/0:20,0:20:49.41:0,49,324	1/1:0,19:19:57.14:749,57,0	1/1:0,21:21:53.68:542,54,0	1/1:0,12:12:35.91:389,36,0	1/1:0,20:20:54.14:723,54,0	1/1:0,19:19:57.02:690,57,0	0/0:21,0:21:53.37:0,53,367	0/0:19,0:19:47.30:0,47,307	0/0:15,0:15:41.42:0,41,273	1/1:0,9:9:27.09:374,27,0	0/0:13,0:13:32.40:0,32,212	0/0:30,0:30:64.36:0,64,557	1/1:0,8:8:11.55:122,12,0	1/1:0,33:33:95.89:1110,96,0	1/1:1,26:27:78.13:991,78,0	1/1:0,12:12:18.27:218,18,0	0/0:19,0:19:56.16:0,56,365	1/1:0,18:18:54.16:721,54,0	1/1:0,18:18:48.07:621,48,0	1/1:0,4:4:9.03:125,9,0
chr10	7718566	.	A	ATT	9870.23	PASS	AB=1.000;AC=27;AF=0.482;AN=56;BaseQRankSum=-16.577;DP=497;FS=0.000;HRun=7;HaplotypeScore=181.1192;InbreedingCoeff=0.9175;MQ=75.65;MQ0=1;MQRankSum=11.292;QD=37.53;ReadPosRankSum=0.586;VQSLOD=2.8205;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,19:20:48.16:788,48,0	1/1:1,2:3:6.02:98,6,0	0/0:12,0:12:27.06:0,27,298	0/0:14,0:14:25.40:0,25,237	1/1:2,18:21:51.08:758,51,0	1/1:1,21:24:62.66:959,63,0	1/1:2,19:22:45.15:739,45,0	1/1:5,19:24:57.17:909,57,0	1/1:3,17:20:42.14:689,42,0	0/0:19,0:19:45.45:0,45,186	0/0:21,0:21:23.96:0,24,98	0/0:12,0:12:18.69:0,19,77	0/0:20,0:20:45.52:0,46,187	0/0:19,0:19:37.94:0,38,156	1/1:2,17:19:42.14:690,42,0	1/1:0,19:19:48.16:788,48,0	1/1:3,13:16:39.13:640,39,0	0/0:9,0:9:24.02:0,24,97	1/1:1,11:12:33.11:535,33,0	1/1:1,29:30:87.17:1341,87,0	0/0:8,0:8:5.02:0,5,22	0/0:33,0:33:58.47:0,58,239	0/0:27,0:27:56.98:0,57,232	0/1:12,0:12:0.91:1,0,30	1/1:0,20:20:57.19:936,57,0	0/0:18,0:18:45.55:0,46,188	0/0:18,0:18:37.47:0,37,154	0/0:4,0:4:8.04:0,8,33
chr10	7718581	.	TC	T	2785.58	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=16.556;DP=437;FS=2.195;HRun=1;HaplotypeScore=179.1101;InbreedingCoeff=0.9580;MQ=76.25;MQ0=1;MQRankSum=-16.089;QD=20.33;ReadPosRankSum=7.161;VQSLOD=3.6850;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:63.21:0,63,1007	0/0:3,0:3:9.03:0,9,144	0/0:13,0:13:36.03:0,36,476	0/0:11,0:11:14.72:0,15,371	0/0:18,0:18:54.17:0,54,837	0/0:28,0:27:72.25:0,72,1151	0/0:23,0:23:60.20:0,60,959	0/0:26,0:26:78.27:0,78,1246	0/0:19,0:19:57.19:0,57,909	1/1:0,15:15:44.86:353,45,0	1/1:0,11:11:29.81:217,30,0	1/1:0,4:4:11.88:83,12,0	1/1:0,16:17:50.71:374,51,0	1/1:0,14:14:41.76:307,42,0	0/0:22,0:22:57.19:0,57,911	0/0:19,0:19:54.18:0,54,861	0/0:14,0:14:42.13:0,42,642	1/1:0,5:5:14.96:120,15,0	0/0:23,0:23:69.22:0,69,1051	0/0:35,0:35:99:0,102,1628	1/1:0,3:3:8.95:66,9,0	1/1:0,18:18:50.62:364,51,0	1/1:0,19:19:56.63:412,57,0	1/1:1,4:5:14.90:108,15,0	0/0:25,0:25:72.23:0,72,1127	1/1:0,13:13:38.92:316,39,0	1/1:0,11:11:32.83:248,33,0	1/1:0,2:2:5.98:46,6,0
chr10	7718583	.	AGCTGAGTGGGGCTG	A	14745.01	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=16.471;DP=435;FS=2.757;HRun=0;HaplotypeScore=252.7244;InbreedingCoeff=0.9625;MQ=77.23;MQ0=1;MQRankSum=-15.907;QD=108.42;ReadPosRankSum=7.301;VQSLOD=4.1871;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:63.22:0,63,4470	0/0:4,0:4:12.04:0,12,850	0/0:13,0:13:39.07:0,39,1891	0/0:12,0:12:33.03:0,33,1542	0/0:18,0:18:54.19:0,54,3608	0/0:28,0:27:72.25:0,72,5015	0/0:23,0:23:60.21:0,60,3984	0/0:26,0:26:78.26:0,78,5176	0/0:19,0:19:57.18:0,57,3584	1/1:0,15:15:45.15:1669,45,0	1/1:0,11:11:30.10:1094,30,0	1/1:0,4:4:12.04:435,12,0	1/1:1,16:17:51.18:1865,51,0	1/1:0,14:14:42.14:1535,42,0	0/0:22,0:22:57.20:0,57,3690	0/0:18,0:18:51.18:0,51,3544	0/0:12,0:12:36.12:0,36,2441	1/1:0,5:5:15.05:558,15,0	0/0:23,0:23:63.22:0,63,3799	0/0:36,0:36:99:0,102,6621	1/1:0,3:3:9.03:329,9,0	1/1:0,18:18:51.18:1855,51,0	1/1:0,19:19:57.20:2077,57,0	1/1:0,4:4:12.04:435,12,0	0/0:24,0:24:66.23:0,66,4541	1/1:0,13:13:39.13:1457,39,0	1/1:0,11:11:33.11:1213,33,0	1/1:0,2:2:6.02:221,6,0
chr10	7718869	.	G	GA	7223.95	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-3.661;DP=538;FS=6.319;HRun=7;HaplotypeScore=58.3181;InbreedingCoeff=0.9960;MQ=70.80;MQ0=1;MQRankSum=-3.451;QD=26.36;ReadPosRankSum=2.776;VQSLOD=5.6736;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,21:23:60.18:725,60,0	0/0:6,0:6:18.03:0,18,174	0/0:11,0:11:17.22:0,17,142	0/0:8,0:8:18.02:0,18,173	0/0:29,0:29:75.12:0,75,724	0/0:20,0:20:51.08:0,51,492	0/0:17,0:17:51.08:0,51,493	0/0:35,0:34:81.09:0,81,778	0/0:17,0:17:51.08:0,51,493	1/1:2,25:27:75.20:891,75,0	1/1:3,18:21:57.17:685,57,0	1/1:1,10:11:27.08:326,27,0	1/1:0,14:14:36.11:435,36,0	1/1:2,21:23:60.18:725,60,0	0/0:21,0:21:60.08:0,60,574	0/0:14,0:14:42.07:0,42,406	0/0:20,0:20:51.08:0,51,492	1/1:0,10:10:30.09:362,30,0	0/0:20,0:20:57.02:0,57,535	0/0:30,0:31:89.17:0,89,846	1/1:1,0:13:34.47:175,34,0	1/1:1,21:22:63.19:761,63,0	1/1:0,25:25:75.23:906,75,0	1/1:3,11:14:33.10:399,33,0	0/0:15,0:15:45.07:0,45,435	1/1:5,1:35:88.75:473,89,0	1/1:4,0:24:44.02:230,44,0	1/1:1,0:11:25.88:132,26,0
chr10	7719027	.	GA	G	448.34	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.425;DP=565;FS=0.937;HRun=5;HaplotypeScore=65.2599;InbreedingCoeff=0.9935;MQ=92.47;MQ0=0;MQRankSum=-1.021;QD=23.60;ReadPosRankSum=2.174;VQSLOD=2.5929;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,16:19:48.13:543,48,0	0/0:16,0:16:48.16:0,48,655	0/0:24,0:24:63.16:0,63,806	0/0:22,1:23:26.14:0,26,689	0/0:35,0:35:99:0,99,1353	0/0:16,0:16:48.12:0,48,609	0/0:18,0:18:48.14:0,48,639	0/0:31,0:31:87.28:0,87,1175	0/0:18,0:18:54.18:0,54,738	0/0:31,0:31:84.27:0,84,1133	0/0:20,0:20:57.19:0,57,778	0/0:10,0:10:30.10:0,30,410	0/0:25,0:25:66.21:0,66,888	0/0:23,0:23:66.22:0,66,903	0/0:27,0:26:78.19:0,78,1044	0/0:14,0:14:36.12:0,36,492	0/0:18,0:18:51.17:0,51,698	0/0:9,0:9:24.08:0,24,328	0/0:20,0:20:57.15:0,57,731	0/0:17,0:17:42.14:0,42,574	0/0:12,0:12:33.11:0,33,450	0/0:21,0:21:60.18:0,60,792	0/0:27,0:27:75.25:0,75,1026	0/0:14,0:14:39.12:0,39,519	0/0:12,0:12:33.11:0,33,451	0/0:29,0:29:81.27:0,81,1107	0/0:28,0:28:81.27:0,81,1105	0/0:8,0:8:24.08:0,24,328
chr10	7719082	.	C	CG	9682.57	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-1.154;DP=598;FS=13.634;HRun=0;HaplotypeScore=75.2593;InbreedingCoeff=0.9948;MQ=83.50;MQ0=0;MQRankSum=-4.087;QD=44.21;ReadPosRankSum=2.238;VQSLOD=4.0139;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,19:20:57.19:903,57,0	0/0:11,0:11:33.10:0,33,445	0/0:21,0:21:56.96:0,57,679	0/0:15,0:15:32.03:0,32,427	1/1:1,26:27:69.24:1100,69,0	0/0:25,0:25:69.23:0,69,965	0/0:21,0:21:60.19:0,60,819	1/1:5,26:31:84.27:1278,84,0	0/0:17,0:17:51.17:0,51,713	0/0:32,0:32:93.31:0,93,1295	0/0:36,0:36:99:0,105,1468	0/0:17,0:17:48.16:0,48,671	0/0:24,0:24:72.24:0,72,1007	0/0:14,0:14:42.14:0,42,587	1/1:0,31:30:84.15:1341,84,0	1/1:0,22:22:60.20:958,60,0	0/0:13,0:13:39.13:0,39,545	0/0:6,0:7:12.04:0,12,166	0/0:23,0:23:57.19:0,57,797	0/0:16,0:16:45.14:0,45,611	1/1:0,8:8:24.08:383,24,0	0/0:21,0:21:60.20:0,60,839	0/0:23,0:23:69.23:0,69,963	0/0:13,0:13:39.13:0,39,545	0/0:30,0:30:90.30:0,90,1259	1/1:0,32:32:96.33:1524,96,0	1/1:3,28:32:90.31:1429,90,0	1/1:0,16:15:48.16:767,48,0
chr10	7720267	.	A	AT	888.91	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=0.495;DP=641;FS=0.000;HRun=0;HaplotypeScore=59.7779;InbreedingCoeff=0.9976;MQ=82.72;MQ0=0;MQRankSum=-2.494;QD=35.56;ReadPosRankSum=1.577;VQSLOD=3.2061;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,25:25:63.21:984,63,0	0/0:15,0:15:45.14:0,45,612	0/0:23,0:23:59.31:0,59,802	0/0:12,0:12:26.25:0,26,379	0/0:26,0:26:78.25:0,78,1063	0/0:18,0:18:54.14:0,54,690	0/0:14,0:14:42.10:0,42,536	0/0:35,0:35:99:0,99,1311	0/0:15,0:15:45.12:0,45,593	0/0:30,0:30:87.22:0,87,1178	0/0:20,0:20:60.20:0,60,837	0/0:25,0:25:75.25:0,75,1046	0/0:36,0:36:99:0,102,1374	0/0:22,0:22:66.17:0,66,896	0/0:20,0:20:60.19:0,60,821	0/0:31,0:31:93.22:0,93,1239	0/0:14,0:14:42.14:0,42,586	0/0:9,0:9:27.06:0,27,353	0/0:18,0:18:54.16:0,54,711	0/0:33,0:33:99:0,99,1302	0/0:33,0:33:96.23:0,96,1248	0/0:19,0:19:57.15:0,57,746	0/0:18,0:18:54.17:0,54,737	0/0:19,0:19:57.17:0,57,762	0/0:46,0:46:99:0,138,1891	0/0:20,0:20:57.14:0,57,737	0/0:30,0:30:90.30:0,90,1256	0/0:15,0:15:45.06:0,45,553
chr10	7720972	.	CAA	C	7410.62	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-3.357;DP=702;FS=0.324;HRun=3;HaplotypeScore=110.2740;InbreedingCoeff=0.9995;MQ=72.28;MQ0=0;MQRankSum=-1.300;QD=37.62;ReadPosRankSum=3.390;VQSLOD=4.3021;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,151,2864	1/1:0,11:11:29.94:459,30,0	0/0:17,0:16:48.15:0,48,858	0/0:17,0:17:48.10:0,48,816	0/0:30,0:30:87.30:0,87,1680	1/1:0,21:21:51.17:780,51,0	1/1:1,17:18:42.09:616,42,0	0/0:31,0:31:93.31:0,93,1753	1/1:1,23:24:60.20:917,60,0	0/0:29,0:29:87.28:0,87,1592	0/0:15,0:15:45.14:0,45,802	0/0:22,0:22:66.22:0,66,1244	0/0:21,0:21:63.21:0,63,1186	0/0:27,0:27:78.27:0,78,1475	0/0:24,0:24:66.21:0,66,1213	0/0:26,0:26:78.26:0,78,1476	1/1:2,30:32:78.26:1193,78,0	0/0:8,0:8:24.06:0,24,415	1/1:0,27:27:78.19:1103,78,0	1/1:1,34:35:81.28:1239,81,0	0/0:34,0:34:99:0,102,1930	0/0:28,0:28:75.24:0,75,1406	0/0:21,0:21:63.15:0,63,1116	0/0:35,0:35:99:0,102,1907	1/1:0,29:29:72.24:1102,72,0	0/0:30,0:30:90.29:0,90,1676	0/0:28,0:28:84.29:0,84,1622	0/0:12,0:12:36.12:0,36,652
chr10	7723135	.	G	GT	9349.94	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-17.745;DP=636;FS=25.359;HRun=1;HaplotypeScore=83.5020;InbreedingCoeff=0.9612;MQ=84.14;MQ0=0;MQRankSum=-1.041;QD=39.45;ReadPosRankSum=1.814;VQSLOD=2.9095;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,108,1319	1/1:0,11:11:33.11:495,33,0	0/0:20,0:20:48.98:0,49,660	0/0:18,0:18:40.58:0,41,550	0/0:26,0:26:78.10:0,78,971	1/1:0,23:23:57.19:854,57,0	1/1:1,18:19:45.15:674,45,0	0/0:25,0:24:75.23:0,75,961	1/1:0,17:17:48.16:719,48,0	0/0:36,0:36:99:0,105,1351	0/0:31,0:31:93.27:0,93,1176	0/0:25,0:25:72.23:0,72,935	0/0:29,0:29:84.26:0,84,1074	0/0:19,0:19:57.19:0,57,740	0/0:21,0:21:63.19:0,63,802	0/0:21,1:22:18.23:0,18,734	1/1:1,21:22:63.21:944,63,0	0/0:10,0:10:30.10:0,30,382	1/1:1,16:17:51.16:729,51,0	1/1:2,30:32:87.25:1279,87,0	1/1:4,13:17:39.13:584,39,0	0/0:26,0:26:72.23:0,72,934	0/0:36,0:36:99:0,108,1402	0/0:19,0:19:57.18:0,57,728	1/1:0,20:20:54.18:809,54,0	1/1:2,24:26:0.31:958,0,0	1/1:1,27:27:72.24:1079,72,0	1/1:0,5:5:15.05:225,15,0
chr10	7724805	.	A	AG	7116.33	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=16.147;DP=592;FS=0.680;HRun=0;HaplotypeScore=84.1178;InbreedingCoeff=0.9924;MQ=88.18;MQ0=0;MQRankSum=-2.011;QD=34.55;ReadPosRankSum=1.854;VQSLOD=4.4439;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,43:43:99:1656,111,0	0/0:7,0:7:21.07:0,21,294	0/0:22,0:22:63.16:0,63,824	0/0:21,0:21:57.17:0,57,768	0/0:17,0:17:51.17:0,51,713	0/0:15,0:15:45.14:0,45,611	0/0:28,0:28:84.28:0,84,1170	0/0:30,0:30:87.29:0,87,1209	0/0:32,0:32:96.29:0,96,1297	1/1:3,15:18:40.59:536,41,0	1/1:0,6:6:15.05:197,15,0	1/1:1,23:24:59.09:786,59,0	1/1:2,23:25:66.20:857,66,0	1/1:3,17:20:44.18:596,44,0	0/0:23,0:23:66.22:0,66,917	0/0:25,0:25:72.21:0,72,987	0/0:20,0:20:60.20:0,60,835	1/1:0,18:18:54.18:705,54,0	0/0:22,0:22:60.20:0,60,837	0/0:19,0:19:54.14:0,54,727	0/0:39,0:39:99:0,105,1436	1/1:3,13:16:39.12:511,39,0	1/1:1,11:12:35.33:445,35,0	1/1:1,23:24:63.21:828,63,0	0/0:23,0:23:66.21:0,66,908	0/0:14,0:14:42.14:0,42,585	0/0:25,0:24:72.23:0,72,992	0/0:4,0:4:12.04:0,12,167
chr10	7726261	.	G	GT	3811.90	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=0.754;DP=514;FS=2.854;HRun=8;HaplotypeScore=56.3541;InbreedingCoeff=0.9711;MQ=72.65;MQ0=0;MQRankSum=-1.263;QD=28.03;ReadPosRankSum=1.196;VQSLOD=4.2529;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:37.66:0,38,121	0/0:12,0:12:36.01:0,36,326	0/0:21,0:19:27.46:0,27,285	0/0:7,0:4:2.99:0,3,27	0/0:18,0:18:50.70:0,51,450	0/0:25,1:26:48.05:0,48,581	0/0:15,0:15:45.02:0,45,408	0/0:26,0:26:68.97:0,69,614	0/0:17,0:17:45.02:0,45,412	1/1:3,16:21:55.70:613,56,0	1/1:3,19:22:48.14:554,48,0	1/1:2,14:16:39.12:450,39,0	1/1:0,13:13:35.94:415,36,0	1/1:3,11:15:33.10:378,33,0	0/0:30,0:30:68.99:0,69,621	0/0:13,0:13:38.99:0,39,349	0/0:19,0:19:47.94:0,48,428	1/1:2,11:13:33.10:381,33,0	0/0:17,0:17:41.99:0,42,375	0/0:20,0:20:50.95:0,51,444	0/0:9,0:9:26.99:0,27,239	1/1:0,14:14:42.12:485,42,0	1/1:1,11:12:30:328,30,0	1/1:2,8:10:18.05:208,18,0	0/0:25,0:25:56.07:0,56,588	0/0:33,1:35:52.74:0,53,695	0/0:35,0:35:99:0,99,905	0/0:13,0:13:39.02:0,39,357
chr10	7727139	.	A	AT	602.14	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-5.568;DP=567;FS=7.961;HRun=4;HaplotypeScore=65.3285;InbreedingCoeff=0.9920;MQ=78.39;MQ0=0;MQRankSum=0.262;QD=28.67;ReadPosRankSum=0.484;VQSLOD=3.2043;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,17:20:51.17:697,51,0	0/0:8,0:8:24.04:0,24,254	0/0:24,0:24:46.33:0,46,575	0/0:10,0:10:23.97:0,24,244	0/0:18,0:18:54.12:0,54,598	0/0:18,0:18:51.15:0,51,578	0/0:23,0:23:69.20:0,69,782	0/0:31,0:31:69.17:0,69,759	0/0:12,0:12:33.09:0,33,374	0/0:27,0:27:75.21:0,75,843	0/0:27,0:27:78.21:0,78,873	0/0:23,0:23:68.99:0,69,741	0/0:23,0:23:66.17:0,66,737	0/0:17,0:17:51.15:0,51,578	0/0:27,0:27:72.20:0,72,816	0/0:17,0:17:51.11:0,51,559	0/0:15,0:15:45.08:0,45,485	0/0:12,0:12:30.07:0,30,329	0/0:25,0:25:63.16:0,63,699	0/0:30,0:30:87.25:0,87,986	0/0:15,0:15:39.06:0,39,411	0/0:18,0:18:48.09:0,48,530	0/0:19,0:19:54.15:0,54,611	0/0:9,0:9:24.07:0,24,272	0/0:25,0:25:72.20:0,72,816	0/0:37,0:37:99:0,111,1259	0/0:27,0:27:78.22:0,78,884	0/0:9,0:9:27.08:0,27,306
chr10	7727388	.	T	TCACACAC	1405.80	PASS	AB=0.925;AC=17;AF=0.304;AN=56;BaseQRankSum=8.670;DP=524;FS=22.497;HRun=0;HaplotypeScore=138.9319;InbreedingCoeff=-0.2919;MQ=64.42;MQ0=18;MQRankSum=-1.916;QD=5.19;ReadPosRankSum=-2.993;VQSLOD=0.4730;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:38:97.31:0,97,1290	0/0:9,0:8:9.03:0,9,123	0/0:22,0:14:42.13:0,42,557	0/0:35,0:21:60.18:0,60,776	0/0:13,0:15:39.13:0,39,673	0/1:24,0:25:37.49:37,0,441	0/0:15,0:22:24.78:0,25,459	0/0:27,0:24:69.06:0,69,858	0/0:19,0:25:21.34:0,21,416	0/1:20,0:20:99:508,0,178	0/0:14,0:14:20.90:0,21,281	0/1:14,1:19:19.76:20,0,373	0/1:17,0:17:99:153,0,267	0/1:16,0:15:52.62:53,0,260	0/0:15,0:15:42.14:0,42,773	0/0:14,0:13:39.13:0,39,702	0/1:17,0:24:4.85:5,0,368	0/1:10,0:8:57.93:58,0,92	0/1:11,0:10:17.95:18,0,265	0/1:12,0:12:99:104,0,156	0/1:23,0:22:95.43:95,0,331	0/0:15,0:15:8.76:0,9,122	0/1:11,0:11:57.35:57,0,199	0/1:26,0:22:99:135,0,369	0/1:8,0:14:1.33:1,0,241	0/1:25,0:24:99:138,0,510	0/1:8,0:16:99:127,0,212	1/1:1,0:1:3.01:52,3,0
chr10	7728856	.	TACACACCC	T	5091.34	PASS	AB=0.993;AC=13;AF=0.232;AN=56;BaseQRankSum=-4.810;DP=739;FS=0.430;HRun=0;HaplotypeScore=254.8518;InbreedingCoeff=0.4976;MQ=60.62;MQ0=12;MQRankSum=-5.729;QD=21.57;ReadPosRankSum=-2.733;VQSLOD=3.8333;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:49.14:0,49,2668	0/0:6,0:6:11.77:0,12,73	0/0:43,0:14:15.05:0,15,617	0/1:48,0:23:11.54:12,0,580	1/1:1,28:29:29.55:771,30,0	0/0:40,0:40:67.67:0,68,421	0/0:23,0:23:39.49:0,39,241	1/1:6,25:31:75.18:1464,75,0	0/0:26,0:26:55.90:0,56,348	0/1:20,0:20:7.67:8,0,1233	0/0:19,0:19:39.84:0,40,1283	0/0:17,0:17:17.19:0,17,1213	0/0:32,0:32:71.37:0,71,2909	0/0:40,0:40:99:0,111,3361	1/1:1,27:28:48.03:1318,48,0	1/1:0,25:27:53.86:1428,54,0	0/0:18,0:18:31.87:0,32,194	0/1:10,0:10:40.81:41,0,693	0/1:16,0:16:9.69:10,0,129	0/0:34,0:33:43.98:0,44,311	0/0:40,0:39:90.30:0,90,2281	0/0:16,0:16:39.13:0,39,1171	0/0:16,0:16:48.16:0,48,1421	0/0:30,0:30:65.78:0,66,2148	0/1:26,1:27:40.65:41,0,197	0/0:25,0:25:18.17:0,18,1490	0/0:34,0:34:56.87:0,57,1434	0/0:2,0:2:6.02:0,6,159
chr10	7728858	.	C	CAT	4017.20	PASS	AB=0.538;AC=7;AF=0.125;AN=56;BaseQRankSum=-8.421;DP=750;FS=2.038;HRun=0;HaplotypeScore=194.7937;InbreedingCoeff=0.8348;MQ=59.78;MQ0=13;MQRankSum=1.132;QD=34.93;ReadPosRankSum=-1.480;VQSLOD=4.0227;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:75.85:0,76,1254	0/0:7,0:7:17.76:0,18,118	0/0:42,0:13:27.14:0,27,430	0/0:45,0:22:13.86:0,14,464	0/0:29,0:29:18.43:0,18,131	0/0:36,0:36:71.23:0,71,481	0/0:23,0:23:36.93:0,37,255	0/0:30,0:29:69.50:0,70,521	0/0:26,0:26:59.37:0,59,403	0/0:20,0:20:37.64:0,38,675	0/0:19,0:19:48.12:0,48,618	0/0:17,0:17:44.63:0,45,599	0/0:32,0:32:84.50:0,85,1262	0/0:42,0:42:99:0,120,1601	0/0:28,0:28:49.40:0,49,286	0/0:27,0:27:47.88:0,48,275	0/0:18,0:18:35.63:0,36,242	0/0:10,0:10:30.02:0,30,364	0/0:15,0:15:42.04:0,42,289	0/0:34,0:33:48.01:0,48,335	1/1:6,41:49:80.60:1722,81,0	0/0:16,0:16:45.12:0,45,583	0/0:16,0:16:48.14:0,48,643	0/0:30,0:30:80.79:0,81,1028	0/0:28,0:28:50.26:0,50,347	0/1:4,23:28:4.84:1141,0,5	1/1:5,30:35:54.37:1039,54,0	1/1:0,2:2:6.02:115,6,0
chr10	7728859	.	ACACC	A	8224.21	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=-6.377;DP=744;FS=2.362;HRun=0;HaplotypeScore=197.6686;InbreedingCoeff=0.6471;MQ=59.75;MQ0=13;MQRankSum=-5.876;QD=19.44;ReadPosRankSum=0.892;VQSLOD=4.7797;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:54.73:0,55,1414	1/1:1,6:7:15.05:261,15,0	0/0:42,0:13:9.81:0,10,390	0/1:46,0:22:9.10:9,0,531	1/1:29,0:29:28.94:267,29,0	1/1:2,32:34:69.24:1308,69,0	1/1:0,23:23:42.03:794,42,0	1/1:30,0:29:62.64:520,63,0	1/1:1,25:26:57.20:1081,57,0	0/1:21,0:21:61.57:62,0,532	0/1:18,0:18:5.08:5,0,553	0/0:16,0:16:17.15:0,17,589	0/0:32,0:32:70.54:0,71,1378	0/0:43,0:43:85.28:0,85,1595	1/1:28,0:28:48.10:500,48,0	1/1:27,0:27:54.12:557,54,0	1/1:1,17:18:33.11:626,33,0	0/1:10,0:10:40.82:41,0,323	1/1:3,12:15:41.46:621,41,0	1/1:3,31:33:41.15:794,41,0	0/0:48,0:47:72.68:0,73,727	0/0:16,0:16:17.80:0,18,555	0/0:16,0:16:43.90:0,44,661	0/1:30,0:30:8.37:8,0,949	1/1:4,23:27:41.93:771,42,0	0/0:28,0:28:13.15:0,13,441	0/0:32,0:32:58.76:0,59,489	0/0:2,0:2:6:0,6,55
chr10	7728861	.	ACC	A	4667.29	PASS	AB=0.964;AC=39;AF=0.696;AN=56;BaseQRankSum=9.654;DP=735;FS=0.335;HRun=3;HaplotypeScore=185.6140;InbreedingCoeff=-0.0060;MQ=59.84;MQ0=12;MQRankSum=-0.211;QD=7.11;ReadPosRankSum=-0.194;VQSLOD=0.9322;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:44,0:44:58.17:58,0,581	1/1:6,0:6:14.81:98,15,0	0/0:44,0:14:10.30:0,10,359	0/1:46,0:22:22.47:22,0,354	1/1:29,0:29:26.79:164,27,0	1/1:33,0:33:68.43:476,68,0	1/1:23,0:23:41.43:288,41,0	1/1:27,0:26:58.31:402,58,0	1/1:25,0:25:56.53:393,57,0	0/1:18,1:19:99:132,0,201	0/1:17,1:18:67.82:68,0,226	0/1:17,0:17:26.04:26,0,245	0/0:33,0:33:7.35:0,7,586	0/1:40,3:43:99:118,0,623	1/1:27,0:27:46.79:277,47,0	1/1:27,0:27:53.16:313,53,0	1/1:17,0:17:32.74:228,33,0	0/1:10,0:10:40.94:41,0,138	1/1:15,0:15:41.53:289,42,0	1/1:32,1:32:44.66:335,45,0	1/1:48,0:47:40.71:148,41,0	0/1:15,1:16:29.61:30,0,212	0/1:16,1:17:65.70:66,0,267	0/1:27,3:31:99:173,0,375	1/1:25,0:25:41.60:286,42,0	1/1:28,0:28:10.54:201,11,0	0/1:32,0:32:2.49:35,0,2	0/0:2,0:2:0.35:0,0,2
chr10	7728964	.	TAGG	T	1681.01	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.352;DP=745;FS=2.082;HRun=0;HaplotypeScore=114.0338;InbreedingCoeff=0.9973;MQ=77.37;MQ0=0;MQRankSum=-3.252;QD=35.77;ReadPosRankSum=1.648;VQSLOD=4.6481;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:11,36:47:99:1776,117,0	0/0:10,0:10:30.10:0,30,662	0/0:27,0:27:75.23:0,75,1526	0/0:30,0:31:81.28:0,81,1750	0/0:33,0:33:90.31:0,90,1983	0/0:37,0:37:99:0,105,2236	0/0:29,0:29:81.28:0,81,1786	0/0:36,0:36:99:0,105,2224	0/0:30,0:30:84.24:0,84,1710	0/0:19,0:19:51.18:0,51,1116	0/0:21,0:21:63.21:0,63,1339	0/0:17,0:17:51.18:0,51,1115	0/0:22,0:22:66.21:0,66,1393	0/0:31,0:31:84.29:0,84,1823	0/0:31,0:31:90.26:0,90,1821	0/0:27,0:27:72.24:0,72,1475	0/0:19,0:19:54.19:0,54,1191	0/0:14,0:14:36.12:0,36,794	0/0:17,0:17:45.14:0,45,952	0/0:28,0:28:81.26:0,81,1733	0/0:43,0:43:99:0,108,2349	0/0:31,0:31:87.28:0,87,1878	0/0:21,0:21:63.22:0,63,1355	0/0:34,0:34:96.29:0,96,2058	0/0:17,0:17:45.15:0,45,992	0/0:31,0:31:87.30:0,87,1906	0/0:34,0:34:96.33:0,96,2086	0/0:8,0:8:24.08:0,24,529
chr10	7729045	.	C	CA	1144.40	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-5.358;DP=712;FS=1.359;HRun=7;HaplotypeScore=124.1544;InbreedingCoeff=0.8505;MQ=80.94;MQ0=0;MQRankSum=-3.492;QD=26.01;ReadPosRankSum=0.409;VQSLOD=2.3889;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,38:44:79.36:1239,79,0	0/0:10,0:10:30.05:0,30,290	0/0:21,0:21:44.34:0,44,396	0/0:18,0:18:38.07:0,38,325	0/0:32,0:32:87.12:0,87,835	0/0:32,0:32:75.11:0,75,724	0/0:22,0:22:54.04:0,54,507	0/0:36,0:36:99:0,102,985	0/0:40,0:40:99:0,108,1036	0/0:24,0:24:57.08:0,57,550	0/0:19,0:19:54.07:0,54,517	0/0:23,0:23:57.07:0,57,544	0/0:32,0:32:93.14:0,93,897	0/0:30,0:30:72.10:0,72,691	0/0:25,0:25:63.05:0,63,592	0/0:23,0:23:60.08:0,60,579	0/0:22,0:22:60.08:0,60,574	0/0:13,0:13:39.03:0,39,368	0/0:20,0:20:57.09:0,57,547	0/0:34,0:34:93.12:0,93,892	0/0:21,0:21:54.07:0,54,517	0/0:22,0:22:57.09:0,57,549	0/0:28,0:28:69.06:0,69,658	0/0:29,0:29:81.13:0,81,782	0/0:20,0:20:57.09:0,57,550	0/0:35,0:35:99:0,99,948	0/0:36,0:36:99:0,99,949	0/0:1,0:1:3:0,3,29
chr10	7729600	.	TG	T	5745.77	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-4.792;DP=601;FS=2.538;HRun=1;HaplotypeScore=80.3515;InbreedingCoeff=0.9992;MQ=92.45;MQ0=0;MQRankSum=-6.524;QD=38.05;ReadPosRankSum=2.068;VQSLOD=5.5411;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,144,2184	1/1:0,7:7:21.07:294,21,0	0/0:16,0:16:48.08:0,48,670	0/0:34,0:34:96.27:0,96,1443	0/0:21,0:21:60.20:0,60,958	1/1:0,18:18:39.13:545,39,0	1/1:0,23:23:54.18:755,54,0	0/0:35,0:35:99:0,99,1518	1/1:0,21:21:60.19:838,60,0	0/0:15,0:15:45.15:0,45,720	0/0:18,0:18:51.17:0,51,810	0/0:30,0:30:90.31:0,90,1437	0/0:17,0:17:51.16:0,51,789	0/0:18,0:18:54.18:0,54,862	0/0:17,0:17:51.17:0,51,806	0/0:19,0:19:57.19:0,57,911	1/1:0,21:21:60.20:839,60,0	0/0:15,0:15:45.15:0,45,719	1/1:0,23:23:69.23:965,69,0	1/1:0,13:13:39.13:545,39,0	0/0:35,0:35:99:0,105,1648	0/0:20,0:20:60.20:0,60,952	0/0:12,0:12:33.10:0,33,502	0/0:19,0:19:57.17:0,57,877	1/1:0,25:25:69.23:965,69,0	0/0:20,0:20:60.18:0,60,893	0/0:27,0:26:78.25:0,78,1223	0/0:12,0:12:36.12:0,36,575
chr10	7730319	.	A	AC	489.27	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-3.125;DP=583;FS=2.297;HRun=1;HaplotypeScore=79.2354;InbreedingCoeff=0.9888;MQ=90.68;MQ0=0;MQRankSum=-2.614;QD=34.95;ReadPosRankSum=1.400;VQSLOD=3.7510;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,14:14:39.13:584,39,0	0/0:9,0:9:27.07:0,27,336	0/0:19,0:19:44.81:0,45,556	0/0:28,0:28:62.01:0,62,713	0/0:34,0:34:99:0,102,1293	0/0:26,0:26:78.24:0,78,997	0/0:13,0:13:39.11:0,39,492	0/0:33,0:33:96.29:0,96,1212	0/0:20,0:20:57.16:0,57,713	0/0:36,0:36:99:0,108,1391	0/0:23,0:23:66.21:0,66,857	0/0:19,0:19:57.19:0,57,740	0/0:20,0:20:60.15:0,60,722	0/0:27,0:27:78.20:0,78,957	0/0:22,0:22:66.20:0,66,843	0/0:20,0:20:60.18:0,60,765	0/0:16,0:16:45.15:0,45,584	0/0:14,0:14:39.13:0,39,505	0/0:18,0:18:48.16:0,48,623	0/0:29,0:29:84.24:0,84,1050	0/0:6,0:6:18.04:0,18,217	0/0:24,0:24:72.19:0,72,883	0/0:21,0:21:60.18:0,60,763	0/0:19,0:19:57.19:0,57,739	0/0:20,0:20:60.18:0,60,753	0/0:20,0:20:54.17:0,54,689	0/0:25,0:25:75.23:0,75,953	0/0:8,0:8:24.08:0,24,311
chr10	7731117	.	C	CT	919.94	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-6.791;DP=724;FS=1.533;HRun=7;HaplotypeScore=86.7284;InbreedingCoeff=0.9654;MQ=79.02;MQ0=0;MQRankSum=-0.091;QD=28.75;ReadPosRankSum=0.860;VQSLOD=4.0518;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,30:32:84.26:1015,84,0	0/0:13,0:13:36.06:0,36,348	0/0:21,0:21:48.05:0,48,455	0/0:18,0:18:11.88:0,12,283	0/0:37,0:37:99:0,108,1036	0/0:38,0:38:99:0,102,985	0/0:15,0:15:45.06:0,45,429	0/0:33,0:33:87.12:0,87,832	0/0:26,0:26:75.07:0,75,707	0/0:33,0:33:90.14:0,90,865	0/0:27,0:27:72.10:0,72,691	0/0:22,0:22:66.09:0,66,631	0/0:18,0:18:48.06:0,48,458	0/0:22,0:22:57.07:0,57,544	0/0:36,0:36:99:0,99,956	0/0:37,0:37:99:0,105,994	0/0:20,0:20:60.10:0,60,579	0/0:19,0:19:54.08:0,54,521	0/0:21,0:21:51.07:0,51,489	0/0:34,0:34:96.15:0,96,927	0/0:25,0:25:66.10:0,66,637	0/0:27,0:27:75.09:0,75,713	0/0:29,0:29:81.13:0,81,782	0/0:20,0:20:57.09:0,57,550	0/0:18,0:18:48.07:0,48,463	0/0:41,0:41:99:0,117,1124	0/0:35,0:35:93.11:0,93,885	0/0:7,0:7:21.03:0,21,203
chr10	7732595	.	C	CATAT	3942.96	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=3.944;DP=591;FS=5.047;HRun=0;HaplotypeScore=99.9477;InbreedingCoeff=0.9720;MQ=76.21;MQ0=0;MQRankSum=-0.742;QD=46.94;ReadPosRankSum=-0.604;VQSLOD=4.1912;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:96.33:0,96,1669	0/0:14,0:14:42.14:0,42,725	0/0:18,0:17:29.59:0,30,472	0/0:19,0:15:12.04:0,12,115	1/1:4,26:31:69.24:1751,69,0	0/0:14,0:14:36.12:0,36,626	0/0:14,0:14:36.12:0,36,626	1/1:17,13:33:57.14:1280,57,0	0/0:20,0:20:42.14:0,42,722	0/0:31,0:32:84.27:0,84,1390	0/0:19,0:19:48.16:0,48,834	0/0:19,0:19:48.15:0,48,807	0/0:24,0:24:63.22:0,63,1082	0/0:14,0:14:36.12:0,36,626	1/1:3,5:9:12.04:303,12,0	1/1:3,8:11:24.08:609,24,0	0/0:19,0:19:51.16:0,51,858	0/0:32,0:32:84.21:0,84,1372	0/0:22,0:22:45.14:0,45,741	0/0:31,0:31:84.28:0,84,1432	0/0:10,0:10:21.07:0,21,365	0/0:8,0:8:12.04:0,12,209	0/0:16,0:16:45.15:0,45,782	0/0:10,0:10:27.05:0,27,437	0/0:40,0:40:99:0,99,1715	0/0:25,0:25:72.23:0,72,1190	0/0:31,0:31:90.31:0,90,1560	0/0:13,0:13:30.02:0,30,521
chr10	7733136	.	A	AAAAG	1941.85	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-7.087;DP=654;FS=17.619;HRun=0;HaplotypeScore=100.1965;InbreedingCoeff=0.8440;MQ=70.37;MQ0=0;MQRankSum=-3.028;QD=57.11;ReadPosRankSum=0.542;VQSLOD=4.0809;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,30:34:81.28:2037,81,0	0/0:7,0:7:18.06:0,18,310	0/0:11,0:11:27.09:0,27,455	0/0:20,0:20:42.14:0,42,673	0/0:31,0:31:81.26:0,81,1352	0/0:25,0:25:60.16:0,60,1000	0/0:29,0:29:75.22:0,75,1208	0/0:37,0:37:77.37:0,77,1288	0/0:18,0:18:48.16:0,48,825	0/0:22,0:22:57.19:0,57,956	0/0:26,0:26:69.23:0,69,1161	0/0:31,0:31:81.25:0,81,1334	0/0:26,0:26:71.83:0,72,1189	0/0:25,0:25:72.22:0,72,1183	0/0:18,0:18:45.15:0,45,774	0/0:22,0:22:60.21:0,60,1029	0/0:40,0:40:99:0,114,1933	0/0:18,0:18:48.16:0,48,820	0/0:20,0:20:54.18:0,54,926	0/0:24,0:24:60.21:0,60,1029	0/0:20,0:20:48.13:0,48,794	0/0:17,0:17:33.10:0,33,534	0/0:21,0:21:60.21:0,60,1031	0/0:26,0:26:75.21:0,75,1258	0/0:23,0:22:60.19:0,60,1004	0/0:34,0:34:93.31:0,93,1567	0/0:28,0:28:75.26:0,75,1288	0/0:1,0:1:3.01:0,3,52
chr10	7733665	.	CT	C	3815.53	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=11.617;DP=676;FS=4.251;HRun=2;HaplotypeScore=68.1950;InbreedingCoeff=0.9994;MQ=81.27;MQ0=0;MQRankSum=-1.241;QD=36.00;ReadPosRankSum=-0.880;VQSLOD=3.8651;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:84.27:0,84,1235	0/0:8,0:8:24.08:0,24,358	0/0:19,0:19:54.17:0,54,730	0/0:17,0:17:42.13:0,42,583	1/1:3,20:23:60.18:759,60,0	0/0:19,0:19:57.18:0,57,836	0/0:26,0:26:78.26:0,78,1156	1/1:1,29:30:87.28:1129,87,0	0/0:26,0:26:75.21:0,75,1098	0/0:32,0:32:93.31:0,93,1378	0/0:21,0:21:60.19:0,60,878	0/0:24,0:24:69.22:0,69,1014	0/0:17,0:17:51.16:0,51,744	0/0:25,0:25:75.25:0,75,1105	1/1:0,28:28:78.25:1009,78,0	1/1:1,24:25:72.22:918,72,0	0/0:25,0:25:75.25:0,75,1120	0/0:32,0:32:84.25:0,84,1210	0/0:26,0:26:78.26:0,78,1168	0/0:31,0:31:93.30:0,93,1375	0/0:16,0:16:48.16:0,48,719	0/0:34,0:34:99:0,99,1481	0/0:23,0:23:69.21:0,69,997	0/0:21,0:21:63.20:0,63,924	0/0:24,0:24:69.21:0,69,1009	0/0:25,0:25:75.21:0,75,1063	0/0:33,0:32:99:0,99,1464	0/0:16,0:16:48.11:0,48,655
chr10	7733717	.	C	CT	3965.23	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-5.784;DP=665;FS=2.223;HRun=8;HaplotypeScore=76.0252;InbreedingCoeff=0.9909;MQ=78.74;MQ0=4;MQRankSum=-1.343;QD=28.94;ReadPosRankSum=-1.318;VQSLOD=3.5163;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,19:23:51.15:612,51,0	0/0:7,0:7:18.03:0,18,174	0/0:51,0:32:51.01:0,51,461	0/0:40,0:22:13.31:0,13,216	1/1:6,38:44:99:1533,129,0	0/0:26,0:26:72.09:0,72,690	0/0:21,0:21:54.07:0,54,516	1/1:8,16:24:22.15:526,22,0	0/0:23,0:23:66.09:0,66,631	0/0:33,0:33:81.10:0,81,774	0/0:22,0:22:57.08:0,57,546	0/0:23,0:23:60.98:0,61,581	0/0:19,0:19:51.08:0,51,492	0/0:22,0:22:60.04:0,60,565	1/1:14,13:27:37.25:714,37,0	1/1:4,15:19:48.15:580,48,0	0/0:16,0:16:39.06:0,39,377	0/0:31,0:31:68.83:0,69,659	0/0:18,0:18:41.92:0,42,375	0/0:30,0:30:78.08:0,78,742	0/0:9,0:9:21.03:0,21,203	0/0:29,0:29:66.09:0,66,632	0/0:24,0:24:60.07:0,60,573	0/0:18,0:18:48.04:0,48,451	0/0:18,0:18:48.07:0,48,458	0/0:20,0:20:54.07:0,54,516	0/0:18,0:18:54.07:0,54,516	0/0:10,0:10:30.05:0,30,288
chr10	7734285	.	AGTGT	A	3556.54	PASS	AB=0.869;AC=27;AF=0.519;AN=52;BaseQRankSum=3.025;DP=772;FS=5.749;HRun=0;HaplotypeScore=180.3138;InbreedingCoeff=0.7755;MQ=62.98;MQ0=4;MQRankSum=-2.758;QD=9.88;ReadPosRankSum=4.169;VQSLOD=2.1114;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:43:56.12:0,56,1154	1/1:8,4:12:12:162,12,0	./.	0/0:47,0:35:8.25:0,8,106	1/1:10,0:22:5.74:51,6,0	1/1:14,9:23:15.01:210,15,0	1/1:19,8:27:11.91:297,12,0	./.	1/1:19,13:33:24.21:446,24,0	0/0:26,0:33:52.05:0,52,959	0/0:10,0:12:5.53:0,6,90	0/0:25,0:40:29.90:0,30,446	0/0:18,0:26:24.08:0,24,429	0/0:30,0:40:11.73:0,12,182	1/1:17,0:29:27.03:251,27,0	1/1:14,0:27:33.02:302,33,0	1/1:19,21:39:60.20:945,60,0	0/0:12,0:26:36.09:0,36,667	1/1:8,3:11:6.01:75,6,0	1/1:7,7:14:17.77:169,18,0	0/1:35,0:40:0.03:0,0,0	0/0:15,0:29:23.54:0,24,429	0/0:10,0:15:6.02:0,6,118	0/0:21,0:46:54.03:0,54,906	1/1:15,7:22:17.71:256,18,0	0/1:16,1:28:22.62:224,0,23	1/1:17,0:25:18.02:168,18,0	0/1:4,0:4:0:0,0,0
chr10	7735854	.	TC	T	7841.46	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=13.888;DP=692;FS=17.208;HRun=1;HaplotypeScore=75.5751;InbreedingCoeff=0.9952;MQ=82.99;MQ0=4;MQRankSum=-2.347;QD=40.21;ReadPosRankSum=3.268;VQSLOD=3.3755;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,132,2052	0/0:12,0:12:36.11:0,36,552	0/0:40,0:37:74.06:0,74,1287	0/0:42,0:35:76.59:0,77,1228	0/0:23,0:23:69.22:0,69,1068	0/0:14,0:14:42.06:0,42,614	0/0:23,0:23:69.21:0,69,1057	0/0:29,0:29:81.24:0,81,1246	0/0:24,0:24:72.25:0,72,1141	1/1:0,20:20:60.18:818,60,0	1/1:0,18:18:51.13:691,51,0	1/1:0,32:32:87.29:1215,87,0	1/1:0,14:14:42.14:587,42,0	1/1:0,29:29:87.29:1216,87,0	0/0:26,0:26:78.25:0,78,1219	0/0:27,0:27:81.24:0,81,1246	0/0:24,0:24:72.18:0,72,1064	1/1:0,25:25:72.24:1007,72,0	0/0:27,0:27:81.26:0,81,1254	0/0:19,0:19:57.18:0,57,888	0/0:38,0:38:99:0,114,1795	1/1:0,17:17:51.17:713,51,0	1/1:0,19:19:54.18:755,54,0	1/1:0,21:21:60.20:839,60,0	0/0:28,0:28:84.25:0,84,1270	0/0:32,0:32:96.32:0,96,1508	0/0:19,0:17:54.18:0,54,862	0/0:4,0:4:12.04:0,12,192
chr10	7737502	.	TG	T	12833.48	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=17.765;DP=849;FS=1.434;HRun=1;HaplotypeScore=149.0603;InbreedingCoeff=0.9972;MQ=79.73;MQ0=1;MQRankSum=-3.932;QD=39.25;ReadPosRankSum=3.112;VQSLOD=4.4684;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,35:34:96.32:1343,96,0	0/0:15,0:15:42.14:0,42,668	0/0:19,0:19:57.19:0,57,883	0/0:23,0:23:60.20:0,60,950	0/0:30,0:30:90.29:0,90,1415	0/0:33,0:33:96.33:0,96,1531	0/0:25,0:25:75.22:0,75,1151	0/0:35,0:35:99:0,105,1636	0/0:37,0:37:99:0,111,1742	1/1:0,42:42:99:1702,123,0	1/1:0,30:30:90.26:1237,90,0	1/1:0,39:39:99:1385,99,0	1/1:1,33:34:99:1377,99,0	1/1:0,31:31:90.30:1259,90,0	0/0:39,0:39:99:0,117,1794	0/0:25,0:25:75.26:0,75,1199	0/0:18,0:18:54.18:0,54,863	1/1:0,18:18:45.15:629,45,0	0/0:22,0:22:63.20:0,63,974	0/0:36,0:36:99:0,108,1680	0/0:43,0:43:99:0,126,1990	1/1:0,34:34:99:1385,99,0	1/1:0,35:34:99:1384,99,0	1/1:0,29:29:81.27:1133,81,0	0/0:28,0:28:84.29:0,84,1343	0/0:31,2:33:15.38:0,15,1383	0/0:54,0:54:99:0,160,2497	0/0:7,0:7:21.07:0,21,303
chr10	7737923	.	AC	A	10855.05	PASS	AB=0.830;AC=43;AF=0.768;AN=56;BaseQRankSum=-13.940;DP=653;FS=3.210;HRun=9;HaplotypeScore=124.1353;InbreedingCoeff=0.7346;MQ=75.65;MQ0=0;MQRankSum=-0.801;QD=20.88;ReadPosRankSum=4.252;VQSLOD=3.9315;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:7:8.70:0,9,52	1/1:1,17:18:42.02:385,42,0	0/1:19,1:19:25.44:25,0,282	0/1:13,0:13:3.32:3,0,133	0/0:43,0:43:99:0,99,433	1/1:2,30:32:87.05:796,87,0	1/1:4,16:20:49.57:443,50,0	0/0:33,0:33:63.33:0,63,292	1/1:2,20:22:57.02:522,57,0	1/1:3,22:25:66.03:603,66,0	1/1:1,16:17:47.94:425,48,0	1/1:1,29:30:81.04:741,81,0	1/1:3,15:18:39.02:356,39,0	1/1:1,29:30:75.04:686,75,0	0/0:24,0:24:54.89:0,55,232	0/0:25,1:26:41.36:0,41,253	1/1:0,25:25:57.03:521,57,0	1/1:0,18:18:48.01:433,48,0	1/1:3,16:19:47.92:419,48,0	1/1:7,24:31:39.35:597,39,0	1/1:0,28:28:69.04:632,69,0	1/1:3,22:25:68.91:611,69,0	1/1:1,21:22:56.68:521,57,0	1/1:2,13:15:27.01:247,27,0	1/1:4,15:19:4.40:295,4,0	1/1:2,29:31:80.09:776,80,0	1/1:6,22:28:63.03:576,63,0	0/1:2,12:14:1.60:241,0,2
chr10	7737924	.	C	CA	4567.49	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-13.827;DP=665;FS=6.513;HRun=2;HaplotypeScore=148.6296;InbreedingCoeff=0.9716;MQ=75.36;MQ0=0;MQRankSum=-1.020;QD=34.87;ReadPosRankSum=-3.036;VQSLOD=3.1299;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:7:6.54:0,7,69	0/0:18,0:18:43.93:0,44,259	0/0:20,0:19:21.49:0,21,366	0/0:13,0:13:20.91:0,21,276	1/1:0,43:43:99:1548,120,0	0/0:32,0:32:90.66:0,91,530	0/0:20,0:20:58.73:0,59,376	1/1:4,33:37:99:1163,99,0	0/0:23,0:23:58.55:0,59,343	0/0:25,0:25:73.14:0,73,443	0/0:17,0:17:46.85:0,47,278	0/0:31,0:31:78.37:0,78,444	0/0:18,0:18:46.58:0,47,288	0/0:30,0:30:76.09:0,76,442	1/1:1,23:24:60.19:854,60,0	1/1:2,25:27:58.50:1002,59,0	0/0:26,0:26:55.52:0,56,316	0/0:19,0:19:46.83:0,47,272	0/0:19,0:19:30.20:0,30,272	0/0:31,0:31:88.18:0,88,569	0/0:29,0:29:67.26:0,67,383	0/0:28,0:28:49.34:0,49,362	0/0:22,0:22:55.45:0,55,316	0/0:15,0:15:32.32:0,32,203	0/0:20,0:20:47.11:0,47,322	0/0:31,0:31:68.55:0,69,498	0/0:26,0:26:64.09:0,64,370	0/0:14,0:14:32.23:0,32,208
chr10	7740226	.	AC	A	3516.61	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=10.788;DP=735;FS=1.364;HRun=1;HaplotypeScore=109.5743;InbreedingCoeff=0.9998;MQ=89.34;MQ0=0;MQRankSum=-1.805;QD=38.22;ReadPosRankSum=2.525;VQSLOD=3.7109;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:93.26:0,93,1426	0/0:16,0:16:48.11:0,48,712	0/0:34,0:34:99:0,102,1547	0/0:20,0:20:58.41:0,58,884	0/0:27,0:27:81.27:0,81,1281	0/0:25,0:25:75.22:0,75,1149	0/0:25,0:25:75.24:0,75,1176	0/0:34,0:34:99:0,102,1575	0/0:28,0:28:84.29:0,84,1342	0/0:27,0:27:81.28:0,81,1294	0/0:18,0:18:51.17:0,51,815	0/0:34,0:34:96.28:0,96,1449	0/0:40,0:40:99:0,120,1842	0/0:28,0:28:84.29:0,84,1340	0/0:35,0:35:99:0,105,1632	0/0:31,0:31:93.30:0,93,1446	0/0:36,0:36:99:0,105,1647	0/0:16,0:16:48.10:0,48,703	0/0:14,0:14:42.14:0,42,650	0/0:21,0:20:60.20:0,60,931	1/1:0,25:25:66.22:923,66,0	0/0:25,0:25:75.26:0,75,1195	0/0:28,0:28:81.28:0,81,1294	0/0:22,0:22:66.20:0,66,1021	0/0:27,0:27:81.25:0,81,1256	1/1:0,30:30:90.24:1190,90,0	1/1:1,26:27:72.20:985,72,0	1/1:0,10:10:30.10:419,30,0
chr10	7743294	.	CT	C	1596.51	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=10.500;DP=795;FS=3.561;HRun=2;HaplotypeScore=78.8334;InbreedingCoeff=0.9960;MQ=97.52;MQ0=1;MQRankSum=-6.586;QD=32.58;ReadPosRankSum=0.175;VQSLOD=3.4796;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,48:49:99:1691,132,0	0/0:16,0:16:48.15:0,48,744	0/0:48,0:48:99:0,141,2152	0/0:32,0:31:77.94:0,78,1186	0/0:23,0:23:69.22:0,69,1075	0/0:24,0:24:72.25:0,72,1143	0/0:21,0:21:63.20:0,63,983	0/0:40,0:40:99:0,120,1913	0/0:30,0:30:90.31:0,90,1439	0/0:33,0:33:99:0,99,1583	0/0:23,0:23:69.21:0,69,1057	0/0:30,0:30:90.29:0,90,1415	0/0:24,0:24:72.25:0,72,1151	0/0:39,0:39:99:0,117,1869	0/0:36,0:36:99:0,105,1679	0/0:31,0:31:93.30:0,93,1462	0/0:29,0:29:87.30:0,87,1388	0/0:22,0:22:66.20:0,66,1027	0/0:18,0:18:54.18:0,54,864	0/0:23,0:23:69.24:0,69,1099	0/0:41,0:41:99:0,123,1943	0/0:32,0:32:96.33:0,96,1531	0/0:28,0:28:84.29:0,84,1334	0/0:23,0:23:69.24:0,69,1103	0/0:23,0:23:66.20:0,66,1009	0/0:24,0:24:72.25:0,72,1151	0/0:26,0:26:78.25:0,78,1224	0/0:7,0:6:21.07:0,21,335
chr10	7744204	.	G	GA	23248.87	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-8.781;DP=676;FS=7.753;HRun=3;HaplotypeScore=59.7825;InbreedingCoeff=0.9905;MQ=87.84;MQ0=0;MQRankSum=-11.284;QD=37.02;ReadPosRankSum=5.807;VQSLOD=4.8274;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,38:39:99:1469,105,0	1/1:0,5:5:15.01:188,15,0	0/0:22,0:22:63.19:0,63,746	0/0:26,0:26:75.11:0,75,851	1/1:0,28:28:84.28:1175,84,0	1/1:3,25:28:75.25:1050,75,0	1/1:1,20:21:57.19:798,57,0	1/1:3,32:35:96.28:1287,96,0	1/1:2,30:32:84.28:1175,84,0	1/1:3,18:22:57.18:775,57,0	1/1:0,21:21:60.16:818,60,0	1/1:0,19:19:57.19:798,57,0	1/1:2,28:30:75.24:1034,75,0	1/1:3,21:24:63.21:882,63,0	1/1:1,34:35:96.32:1344,96,0	1/1:0,26:26:72.24:1007,72,0	1/1:2,30:32:78.26:1092,78,0	1/1:0,13:13:33.11:462,33,0	1/1:1,21:22:63.20:865,63,0	1/1:1,14:15:42.10:565,42,0	1/1:0,39:39:99:1470,105,0	1/1:0,20:20:51.13:684,51,0	1/1:1,17:18:39.09:524,39,0	1/1:2,33:35:93.31:1302,93,0	1/1:0,14:14:36.12:504,36,0	1/1:1,24:25:69.21:933,69,0	1/1:2,20:22:51.15:714,51,0	1/1:0,8:8:24.08:336,24,0
chr10	7747888	.	T	TGG	1558.21	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-0.724;DP=574;FS=3.105;HRun=2;HaplotypeScore=117.3502;InbreedingCoeff=0.9224;MQ=72.54;MQ0=18;MQRankSum=-0.774;QD=11.21;ReadPosRankSum=-1.494;VQSLOD=0.1915;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:24:54.56:0,55,445	1/1:8,0:8:23.92:192,24,0	0/0:36,0:21:53.20:0,53,550	0/0:46,0:35:89.13:0,89,899	0/0:18,0:15:29.58:0,30,225	1/1:2,11:13:8.51:94,9,0	1/1:28,0:27:62.93:577,63,0	0/0:23,0:22:59.90:0,60,522	1/1:17,0:16:2.97:20,3,0	0/0:25,0:24:44.65:0,45,380	0/0:9,0:8:5.99:0,6,50	0/0:26,0:26:57.60:0,58,451	0/0:23,0:23:56.25:0,56,411	0/0:27,0:27:44.65:0,45,360	0/0:20,0:20:44.29:0,44,357	0/0:13,0:13:19.71:0,20,157	1/1:5,26:31:11.99:133,12,0	0/0:12,0:12:17.74:0,18,188	1/1:16,0:16:38.48:324,38,0	1/1:12,0:12:20.73:229,21,0	0/0:31,0:30:50.65:0,51,403	0/0:11,0:11:14.70:0,15,117	0/0:13,0:13:11.01:0,11,77	0/0:30,0:30:62.62:0,63,485	1/1:13,0:13:21:185,21,0	0/0:19,0:18:41.90:0,42,360	0/0:19,0:19:50.14:0,50,375	0/0:9,0:8:20.94:0,21,166
chr10	7747889	.	GGTGTGTGTGTGT	G	1210.49	PASS	AB=0.829;AC=18;AF=0.391;AN=46;BaseQRankSum=5.837;DP=590;FS=11.468;HRun=0;HaplotypeScore=195.5446;InbreedingCoeff=0.4611;MQ=70.79;MQ0=19;MQRankSum=-5.906;QD=5.71;ReadPosRankSum=-0.271;VQSLOD=1.5753;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:23.55:0,24,1033	0/0:8,0:9:12.04:0,12,515	./.	./.	0/1:14,0:14:13.20:13,0,228	0/0:18,0:18:5.02:0,5,306	0/0:29,0:28:17.95:0,18,567	0/0:23,0:22:5.99:0,6,61	./.	0/0:24,0:23:1.55:0,2,4	1/1:8,0:8:3.01:63,3,0	1/1:21,3:25:6.38:186,6,0	1/1:22,1:23:6.02:159,6,0	1/1:18,6:25:5.98:204,6,0	0/1:17,0:22:72.24:72,0,202	0/0:11,0:13:6.85:0,7,93	0/0:35,0:35:13.60:0,14,621	./.	0/0:20,0:20:12.51:0,13,573	0/0:13,0:13:6.02:0,6,317	./.	1/1:7,4:11:2.74:73,3,0	0/1:7,6:13:0:0,0,0	0/1:29,0:30:0:0,0,0	0/0:12,0:12:6.02:0,6,250	1/1:18,0:18:6.02:167,6,0	1/1:12,0:18:14.67:418,15,0	0/0:9,0:8:3.01:0,3,148
chr10	7749492	.	GTGATTGGTGTCAGTCA	G	2666.79	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=7.405;DP=855;FS=7.835;HRun=0;HaplotypeScore=349.1924;InbreedingCoeff=0.8211;MQ=66.79;MQ0=0;MQRankSum=-3.252;QD=12.12;ReadPosRankSum=-0.645;VQSLOD=0.9673;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:61,0:61:99:0,108,4483	1/1:6,1:7:3.01:130,3,0	0/0:12,0:9:0:0,0,0	0/1:19,0:15:0:0,0,0	0/0:23,0:23:39.13:0,39,1950	1/1:16,11:27:9.03:388,9,0	1/1:36,0:36:6.01:73,6,0	0/0:30,0:30:6.01:0,6,83	1/1:18,16:34:21.07:888,21,0	0/0:32,0:32:39.10:0,39,1311	0/0:16,0:16:21.07:0,21,933	0/0:39,0:39:54.19:0,54,2677	0/0:52,0:52:87.27:0,87,4331	0/0:34,0:34:63.22:0,63,3077	0/0:40,0:40:66.23:0,66,3200	0/0:55,0:55:96.33:0,96,4664	1/1:24,10:34:6.02:259,6,0	0/0:17,0:17:18.06:0,18,875	1/1:21,6:26:15.02:339,15,0	1/1:14,13:27:24.02:689,24,0	0/0:52,0:52:78.27:0,78,3837	0/0:23,0:23:27.09:0,27,1166	0/0:23,0:23:39.13:0,39,1958	0/0:45,0:45:57.20:0,57,2626	1/1:9,0:9:3.01:79,3,0	0/0:28,0:28:45.15:0,45,2290	0/0:35,0:35:63.22:0,63,3270	0/0:18,0:18:48.16:0,48,2306
chr10	7751599	.	AACACACACACAC	A	991.10	PASS	AB=0.750;AC=7;AF=0.130;AN=54;BaseQRankSum=2.622;DP=612;FS=1.051;HRun=0;HaplotypeScore=201.4887;InbreedingCoeff=0.5764;MQ=68.39;MQ0=17;MQRankSum=-1.239;QD=10.43;ReadPosRankSum=1.641;VQSLOD=2.6895;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:37:27.08:0,27,681	0/0:10,0:10:9.03:0,9,464	./.	0/0:35,0:22:1.82:0,2,5	0/0:18,0:18:5.93:0,6,166	0/0:7,0:15:9.03:0,9,469	0/0:31,0:31:30.10:0,30,1567	0/0:21,0:21:13.60:0,14,432	0/0:14,0:13:12.04:0,12,598	0/0:16,0:20:27.98:0,28,1387	0/0:13,0:16:18.04:0,18,729	0/0:23,0:22:27.56:0,28,1265	0/0:20,0:18:21.07:0,21,853	0/0:22,0:21:39.13:0,39,1983	0/0:30,0:38:15.52:0,16,555	0/0:18,0:18:6.02:0,6,250	0/0:23,0:24:30.08:0,30,1461	0/0:19,0:20:27.09:0,27,1400	0/0:14,0:14:10.64:0,11,334	0/0:7,0:8:9.50:0,10,366	1/1:20,9:27:3.01:103,3,0	0/0:15,0:24:22.62:0,23,1041	0/0:16,0:16:18.03:0,18,732	0/0:20,0:32:30.10:0,30,1485	0/0:10,0:10:9.03:0,9,456	0/1:16,8:24:99:357,0,142	1/1:14,10:23:8.19:281,8,0	1/1:14,2:17:12.04:377,12,0
chr10	7753028	.	TC	T	1036.74	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.214;DP=597;FS=2.956;HRun=7;HaplotypeScore=65.2168;InbreedingCoeff=0.9360;MQ=74.39;MQ0=0;MQRankSum=-2.326;QD=21.60;ReadPosRankSum=2.125;VQSLOD=3.4690;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,42:48:99:1132,111,0	0/0:10,0:10:27.09:0,27,339	0/0:23,0:23:41.63:0,42,554	0/0:17,0:16:18.07:0,18,277	0/0:16,0:16:33.11:0,33,415	0/0:17,0:17:45.14:0,45,566	0/0:25,0:25:69.21:0,69,853	0/0:26,0:26:60.17:0,60,732	0/0:12,0:12:36.10:0,36,440	0/0:18,0:18:51.16:0,51,641	0/0:15,0:15:42.13:0,42,522	0/0:24,0:24:69.21:0,69,854	0/0:22,0:22:63.17:0,63,753	0/0:24,0:24:72.23:0,72,905	0/0:31,0:31:87.27:0,87,1082	0/0:25,0:25:57.17:0,57,703	0/0:34,0:34:92.32:0,92,1137	0/0:11,0:11:33.11:0,33,415	0/0:27,0:27:57.17:0,57,696	0/0:20,0:20:57.16:0,57,690	0/0:33,0:33:96.16:0,96,1125	0/0:21,0:21:57.16:0,57,692	0/0:14,0:14:36.11:0,36,452	0/0:29,0:29:84.74:0,85,1053	0/0:18,0:18:48.15:0,48,600	0/0:11,0:11:30.09:0,30,366	0/0:23,0:23:69.17:0,69,814	0/0:3,0:3:9.03:0,9,113
chr10	7753281	.	GGACAGACAGACAGACA	G	10466.02	PASS	AB=0.645;AC=32;AF=0.593;AN=54;BaseQRankSum=0.239;DP=728;FS=0.000;HRun=0;HaplotypeScore=278.7477;InbreedingCoeff=0.7438;MQ=57.51;MQ0=8;MQRankSum=-6.014;QD=23.10;ReadPosRankSum=2.784;VQSLOD=2.9718;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:54:78.95:105,0,79	0/0:6,0:10:15.05:0,15,590	0/0:22,0:12:12.04:0,12,343	0/0:27,0:16:6.02:0,6,194	1/1:10,11:20:26.95:634,27,0	0/0:14,0:27:48.16:0,48,1776	0/0:15,0:31:36.10:0,36,1127	1/1:19,15:33:43.96:497,44,0	0/0:14,0:32:54.16:0,54,1628	1/1:12,14:26:42.03:1009,42,0	1/1:6,8:14:12:414,12,0	1/1:9,22:31:30.10:1321,30,0	1/1:12,15:27:17.82:792,18,0	1/1:18,20:38:33.11:1452,33,0	1/1:12,15:28:18.06:772,18,0	1/1:14,17:31:24.08:1056,24,0	0/0:18,0:32:54.11:0,54,1917	1/1:8,9:17:6.02:264,6,0	0/0:19,0:23:29.13:0,29,700	0/0:10,0:25:42.14:0,42,1586	./.	1/1:12,12:24:12.04:436,12,0	1/1:12,11:22:5.53:210,6,0	1/1:13,18:31:12.04:528,12,0	0/0:12,0:25:27.08:0,27,922	0/1:10,0:23:68.77:528,0,69	1/1:8,0:22:8.92:335,9,0	1/1:1,0:9:3.01:112,3,0
chr10	7753799	.	C	CAGAGAGAGAGAGAG	1411.60	PASS	AB=0.980;AC=21;AF=0.375;AN=56;BaseQRankSum=9.610;DP=530;FS=19.198;HRun=0;HaplotypeScore=191.7528;InbreedingCoeff=-0.3989;MQ=43.85;MQ0=20;MQRankSum=-5.552;QD=4.64;ReadPosRankSum=-3.981;VQSLOD=0.5729;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:16,0:16:35.63:36,0,177	1/1:11,0:11:5.04:38,5,0	0/0:64,0:17:37.89:0,38,1117	0/0:42,0:9:21.53:0,22,535	0/0:18,0:17:23.23:0,23,699	0/1:16,0:16:82.32:82,0,130	0/1:18,0:17:70.12:70,0,543	0/0:24,0:22:57.65:0,58,2066	0/1:13,0:13:63.15:63,0,370	0/1:15,0:15:85.82:86,0,747	1/1:12,0:12:3.48:70,3,0	0/1:18,0:18:55.07:55,0,608	0/0:19,1:20:11.78:0,12,324	0/1:14,0:16:99:172,0,189	0/0:17,0:16:7.97:0,8,356	0/1:12,0:12:99:111,0,187	0/1:21,0:21:63.72:64,0,899	0/1:15,2:17:99:154,0,294	0/1:22,0:20:99:206,0,666	0/1:24,0:24:72.38:72,0,278	0/0:11,0:11:15.04:0,15,543	0/0:17,0:17:2.56:0,3,24	0/0:12,0:13:1.28:0,1,41	0/1:12,2:14:13.23:13,0,358	0/1:19,0:19:15.46:15,0,135	0/1:18,0:18:99:168,0,1793	0/1:18,0:17:35.60:36,0,1194	0/1:4,0:4:59.25:59,0,328
chr10	7753803	.	C	CACAT	2409.74	PASS	AB=0.898;AC=28;AF=0.500;AN=56;BaseQRankSum=4.081;DP=503;FS=3.681;HRun=0;HaplotypeScore=136.9193;InbreedingCoeff=0.2333;MQ=46.65;MQ0=19;MQRankSum=-0.745;QD=7.70;ReadPosRankSum=-0.297;VQSLOD=2.1057;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:14,0:14:14.07:31,0,14	1/1:11,0:11:6.02:77,6,0	0/0:50,0:18:41.64:0,42,490	0/0:43,0:9:18.16:0,18,169	0/0:16,0:15:15.33:0,15,249	0/1:16,0:16:14.74:41,0,15	0/1:14,0:15:25.56:64,0,26	0/0:22,0:20:59.29:0,59,856	0/1:13,0:13:14.05:60,0,14	1/1:4,11:15:29.62:571,30,0	0/0:4,8:12:1.11:0,1,3	1/1:13,4:18:17.75:268,18,0	1/1:2,14:19:12.45:220,12,0	1/1:8,7:15:11.92:135,12,0	0/0:16,0:15:9.79:0,10,127	0/1:10,0:10:14.85:15,0,41	1/1:21,0:22:8.54:133,9,0	0/1:5,12:17:5.22:435,0,5	0/1:25,0:23:79.91:139,0,80	0/1:25,0:25:30.91:40,0,31	0/0:9,0:9:12.03:0,12,193	0/1:0,15:16:0.13:0,0,0	1/1:2,9:13:2.49:23,2,0	1/1:11,1:12:20.81:280,21,0	1/1:19,0:19:3.01:42,3,0	0/1:17,0:17:17.66:18,0,549	0/0:18,0:17:28.37:0,28,413	0/0:4,0:4:9.81:0,10,93
chr10	7753809	.	C	CAGAGAGAGAGAGAGAGAGA	17138.27	PASS	AB=1.000;AC=32;AF=0.571;AN=56;BaseQRankSum=9.560;DP=479;FS=25.810;HRun=0;HaplotypeScore=244.2427;InbreedingCoeff=-0.1471;MQ=47.93;MQ0=16;MQRankSum=-7.342;QD=48.14;ReadPosRankSum=6.111;VQSLOD=2.6109;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:2,1:13:1.55:0,2,4	1/1:11,0:11:6.02:351,6,0	0/0:44,0:18:8.65:0,9,1001	0/0:41,0:11:23.81:0,24,556	0/0:15,0:14:9.54:0,10,93	1/1:15,0:15:11.78:590,12,0	0/1:17,0:16:59.28:147,0,59	0/1:27,0:25:99:413,0,195	0/1:11,0:11:1.07:964,0,1	0/1:13,0:13:17.49:864,0,17	1/1:12,0:12:6.02:231,6,0	0/1:18,0:18:72.33:766,0,72	1/1:17,0:17:3.97:792,4,0	1/1:14,0:14:3.75:1417,4,0	0/1:15,0:14:22.19:1042,0,22	1/1:9,0:9:7.48:179,7,0	0/1:21,0:21:48.21:1672,0,48	0/1:14,0:14:18.95:765,0,19	0/1:24,0:22:41.94:2199,0,42	0/1:24,0:24:12.47:204,0,12	0/0:10,0:10:12.83:0,13,96	1/1:11,0:11:5.96:157,6,0	1/1:14,0:14:8.85:94,9,0	0/1:11,0:11:42.93:247,0,43	1/1:19,0:19:3.01:192,3,0	0/1:17,0:17:79.80:1609,0,80	0/1:18,0:17:46.47:1988,0,46	0/1:4,0:4:6.97:257,0,7
chr10	7753811	.	C	CACACAGAGAGAGAGAGAGA	24875.98	PASS	AB=0.956;AC=44;AF=0.786;AN=56;BaseQRankSum=7.751;DP=599;FS=16.611;HRun=0;HaplotypeScore=320.8929;InbreedingCoeff=0.2895;MQ=46.26;MQ0=16;MQRankSum=-4.382;QD=50.66;ReadPosRankSum=4.188;VQSLOD=2.5771;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,0:7:0.68:96,1,0	1/1:1,0:12:6.02:473,6,0	0/0:43,0:19:33.18:0,33,1140	0/0:37,0:11:19.27:0,19,517	0/0:28,0:27:1.77:0,2,168	1/1:14,0:26:14.79:753,15,0	1/1:23,0:22:14.09:449,14,0	0/1:43,0:41:99:773,0,327	1/1:12,0:12:24.07:1311,24,0	1/1:18,0:18:45.10:1653,45,0	1/1:12,0:16:6.02:256,6,0	1/1:16,0:22:32.53:1238,33,0	1/1:18,0:18:29.32:1271,29,0	1/1:19,0:19:30.10:1703,30,0	0/1:23,0:22:40.68:1099,0,41	0/1:14,0:15:13.31:259,0,13	1/1:24,0:24:51.17:2510,51,0	1/1:17,0:17:33.11:1403,33,0	1/1:14,0:28:72.21:3310,72,0	1/1:5,1:28:8.50:248,8,0	0/1:11,0:11:0.02:0,0,121	1/1:13,0:13:5.96:121,6,0	1/1:18,0:18:12.74:121,13,0	1/1:11,0:12:17.87:425,18,0	1/1:8,0:27:3.01:242,3,0	0/1:21,0:26:1.93:2672,0,2	0/1:24,0:24:82.56:2231,0,83	1/1:3,0:6:9:258,9,0
chr10	7754207	.	C	CAA	2494.41	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.369;DP=768;FS=10.846;HRun=3;HaplotypeScore=111.3458;InbreedingCoeff=0.9837;MQ=82.25;MQ0=0;MQRankSum=-4.069;QD=44.54;ReadPosRankSum=1.257;VQSLOD=2.3046;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,53:56:99:2589,147,0	0/0:6,0:6:14.96:0,15,185	0/0:25,0:26:58.24:0,58,818	0/0:17,0:18:42.21:0,42,544	0/0:37,0:37:89.54:0,90,1182	0/0:23,0:23:69.23:0,69,964	0/0:30,0:30:81.24:0,81,1098	0/0:34,0:34:90.30:0,90,1259	0/0:31,0:31:90.30:0,90,1259	0/0:31,0:31:90.30:0,90,1249	0/0:20,0:20:57.19:0,57,797	0/0:19,0:19:57.19:0,57,796	0/0:36,0:36:99:0,108,1509	0/0:24,0:24:66.19:0,66,904	0/0:42,0:42:99:0,126,1744	0/0:25,0:25:75.18:0,75,992	0/0:39,0:39:99:0,105,1409	0/0:28,0:28:84.24:0,84,1137	0/0:18,0:18:51.14:0,51,693	0/0:21,0:21:60.13:0,60,812	0/0:27,0:27:78.26:0,78,1090	0/0:29,0:29:87.18:0,87,1189	0/0:22,0:22:63.21:0,63,880	0/0:25,0:25:66.22:0,66,924	0/0:24,0:24:57.19:0,57,797	0/0:26,0:26:78.26:0,78,1091	0/0:41,0:41:99:0,108,1475	0/0:10,0:10:30.10:0,30,420
chr10	7754581	.	A	ACATTCTTTTTTCG	98010.55	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-5.163;DP=756;FS=26.929;HRun=0;HaplotypeScore=229.7922;InbreedingCoeff=0.9819;MQ=71.31;MQ0=0;MQRankSum=-10.110;QD=138.63;ReadPosRankSum=3.604;VQSLOD=3.6425;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:19,13:37:81.28:4455,81,0	1/1:5,3:9:21.07:1222,21,0	0/0:23,0:23:50.35:0,50,1771	0/0:25,0:26:60.20:0,60,1946	1/1:13,15:29:78.27:4276,78,0	1/1:5,19:29:72.25:4484,72,0	1/1:14,5:19:57.20:2864,57,0	1/1:29,6:35:99:5735,102,0	1/1:13,13:28:72.25:4032,72,0	1/1:21,18:42:99:6078,120,0	1/1:6,9:15:42.14:2346,42,0	1/1:13,15:31:72.25:4084,72,0	1/1:11,14:29:72.25:3903,72,0	1/1:14,15:31:74.71:4245,75,0	1/1:8,18:26:75.26:4518,75,0	1/1:13,24:40:99:6484,108,0	1/1:14,7:24:51.17:2941,51,0	1/1:6,5:12:33.11:1697,33,0	1/1:20,7:31:87.28:3834,87,0	1/1:10,15:29:78.26:4316,78,0	1/1:11,5:21:36.12:1942,36,0	1/1:15,20:38:96.33:5397,96,0	1/1:18,13:34:83.96:4167,84,0	1/1:12,2:17:33.11:1511,33,0	1/1:13,12:28:69.24:3624,69,0	1/1:13,18:36:99:5251,99,0	1/1:7,16:31:65.89:4001,66,0	1/1:3,1:4:12:603,12,0
chr10	7754692	.	AC	A	8186.67	PASS	AB=1.000;AC=25;AF=0.446;AN=56;BaseQRankSum=13.789;DP=736;FS=11.085;HRun=3;HaplotypeScore=127.6587;InbreedingCoeff=0.9300;MQ=58.35;MQ0=4;MQRankSum=-1.310;QD=20.21;ReadPosRankSum=5.568;VQSLOD=3.5008;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,111,1517	0/0:13,0:13:39.11:0,39,523	0/0:21,0:19:52.93:0,53,655	0/0:12,0:12:33.10:0,33,443	1/1:0,37:37:99:1338,108,0	0/0:26,0:26:69.23:0,69,988	0/0:20,0:20:57.19:0,57,819	1/1:0,36:37:99:1300,105,0	0/0:26,1:27:41.07:0,41,1041	1/1:24,3:27:78.55:485,79,0	1/1:29,0:27:75.76:488,76,0	1/1:46,0:46:99:640,113,0	1/1:36,0:36:72.06:403,72,0	1/1:35,0:35:67.25:379,67,0	1/1:1,37:38:99:1210,99,0	1/1:1,22:23:63.20:780,63,0	0/0:26,0:26:72.24:0,72,1031	0/1:13,0:12:14.76:105,0,15	0/0:22,0:22:63.21:0,63,906	0/0:22,0:22:66.21:0,66,931	0/0:21,0:21:32.37:0,32,712	1/1:32,0:30:72.80:453,73,0	1/1:25,0:25:57.99:326,58,0	1/1:27,0:26:49.36:279,49,0	0/0:21,0:21:63.21:0,63,903	0/0:18,0:18:37.61:0,38,713	0/0:28,0:28:81.23:0,81,1142	0/0:17,0:17:48.15:0,48,672
chr10	7754694	.	CCTCT	C	13118.01	PASS	AB=0.822;AC=19;AF=0.339;AN=56;BaseQRankSum=0.977;DP=741;FS=17.320;HRun=0;HaplotypeScore=153.2379;InbreedingCoeff=0.7700;MQ=60.41;MQ0=4;MQRankSum=2.071;QD=40.24;ReadPosRankSum=5.027;VQSLOD=4.2571;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,111,2981	0/0:13,0:13:39.13:0,39,1061	0/0:23,0:20:58.78:0,59,1170	0/0:15,0:15:41.27:0,41,901	0/0:37,0:37:70.73:0,71,904	0/0:26,0:26:72.72:0,73,1984	0/0:20,0:20:60.21:0,60,1676	0/1:38,0:38:24.49:24,0,678	0/0:26,0:26:77.07:0,77,2116	1/1:4,23:27:81.28:1642,81,0	1/1:0,29:27:78.27:1555,78,0	1/1:0,46:46:99:2448,117,0	1/1:1,34:35:75.20:1561,75,0	1/1:0,35:35:72.25:1483,72,0	0/0:39,0:39:67.40:0,67,912	0/0:22,0:22:63.03:0,63,571	0/0:27,0:27:75.26:0,75,2071	0/1:1,12:12:56.54:476,0,57	0/0:21,0:21:63.22:0,63,1649	0/0:22,0:22:66.21:0,66,1754	0/0:21,0:21:53.39:0,53,1396	1/1:1,32:31:78.27:1565,78,0	1/1:0,25:25:60.09:1253,60,0	1/1:0,27:26:54.18:1101,54,0	0/0:21,0:21:63.22:0,63,1733	0/1:17,1:18:8.71:9,0,1249	0/0:28,0:28:84.24:0,84,2143	0/0:17,0:17:48.16:0,48,1332
chr10	7754830	.	C	CTTCCTCCCTCTG	19832.54	PASS	AB=0.545;AC=24;AF=0.429;AN=56;BaseQRankSum=-11.646;DP=849;FS=5.011;HRun=0;HaplotypeScore=224.2188;InbreedingCoeff=0.8336;MQ=56.88;MQ0=3;MQRankSum=-11.955;QD=55.87;ReadPosRankSum=1.099;VQSLOD=4.4318;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,30:45:42.26:2650,42,0	1/1:2,8:10:15.05:888,15,0	0/0:37,0:29:46.48:0,46,1111	0/0:40,0:22:20.46:0,20,564	0/0:27,0:27:69.23:0,69,2168	1/1:6,18:27:21.07:1257,21,0	1/1:6,22:32:33.11:1936,33,0	0/0:28,0:28:48.11:0,48,1149	0/1:4,16:28:67.35:1054,0,67	0/0:32,0:32:87.17:0,87,2543	0/0:21,0:21:55.98:0,56,1577	0/0:43,0:43:99:0,114,3416	0/0:33,0:33:84.20:0,84,2511	0/0:35,0:35:84.27:0,84,2785	0/0:41,0:41:99:0,105,3457	0/0:34,0:34:87.15:0,87,2568	1/1:11,16:34:17.98:719,18,0	0/0:24,0:24:49.10:0,49,1834	1/1:7,13:22:54.09:1819,54,0	1/1:2,12:19:24.08:1155,24,0	1/1:9,15:31:20.54:1044,21,0	0/0:32,0:32:84.26:0,84,2347	0/0:27,0:27:72.23:0,72,2218	0/0:40,0:40:99:0,99,3014	1/1:2,27:31:36.12:2154,36,0	0/1:6,20:32:45.16:2486,0,45	1/1:3,32:39:39.13:2312,39,0	1/1:1,4:5:6.02:360,6,0
chr10	7755712	.	GCACA	G	4167.62	PASS	AB=0.775;AC=40;AF=0.714;AN=56;BaseQRankSum=0.187;DP=727;FS=2.214;HRun=0;HaplotypeScore=172.3995;InbreedingCoeff=0.0111;MQ=58.42;MQ0=17;MQRankSum=-0.302;QD=7.12;ReadPosRankSum=0.959;VQSLOD=2.8501;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:29:2.92:11,0,3	0/1:8,0:15:20.76:21,0,37	0/0:56,0:21:0.98:0,1,3	0/0:65,0:25:5.51:0,6,57	0/1:12,1:20:22.81:23,0,102	1/1:6,0:13:12.01:111,12,0	0/1:18,0:22:7.77:63,0,8	0/1:24,2:24:36.24:36,0,82	1/1:17,0:17:5.39:54,5,0	1/1:19,9:28:10.47:541,10,0	1/1:14,1:14:4.55:70,5,0	1/1:21,12:30:29.85:427,30,0	1/1:25,10:29:26.91:438,27,0	1/1:21,6:25:15.88:238,16,0	0/1:18,2:27:25.27:25,0,153	0/0:9,1:18:18.92:0,19,83	1/1:7,0:22:11.48:102,11,0	0/1:11,14:24:17.05:445,0,17	1/1:15,0:14:7.30:43,7,0	1/1:17,0:22:8.96:71,9,0	1/1:28,0:29:6.92:67,7,0	1/1:18,5:22:17.29:263,17,0	0/1:14,4:20:22.85:66,0,23	1/1:19,22:38:44.23:718,44,0	0/1:13,0:17:18.52:49,0,19	1/1:14,0:17:17.32:156,17,0	1/1:12,0:12:15.95:113,16,0	0/1:5,0:7:17.44:17,0,26
chr10	7755760	.	TCA	T	178.38	PASS	AB=0.957;AC=4;AF=0.071;AN=56;BaseQRankSum=2.825;DP=935;FS=10.481;HRun=0;HaplotypeScore=183.6053;InbreedingCoeff=0.4673;MQ=40.52;MQ0=54;MQRankSum=2.581;QD=2.29;ReadPosRankSum=0.814;VQSLOD=2.0386;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:6,23:27:21.04:268,21,0	0/0:9,0:8:5.28:0,5,99	0/0:86,0:11:26.86:0,27,384	0/0:102,0:16:38.89:0,39,458	0/0:17,0:16:26.97:0,27,390	0/1:16,1:16:8.47:8,0,420	0/0:34,0:28:50.49:0,50,820	0/0:34,0:26:66.19:0,66,1060	0/1:31,1:29:5.07:5,0,467	0/0:35,1:34:27.67:0,28,961	0/0:12,0:12:18.06:0,18,301	0/0:35,0:32:54.18:0,54,893	0/0:33,0:30:54.18:0,54,873	0/0:36,1:33:16.10:0,16,751	0/0:44,0:44:71.80:0,72,1164	0/0:40,0:37:77.86:0,78,1296	0/0:31,0:26:39.13:0,39,650	0/0:36,0:32:68.68:0,69,1216	0/0:16,0:10:24.08:0,24,378	0/0:28,0:23:44.95:0,45,751	0/0:52,0:45:48.11:0,48,803	0/0:29,0:27:43.52:0,44,854	0/0:19,0:17:26.99:0,27,452	0/0:58,1:48:60.20:0,60,991	0/0:21,0:19:24.08:0,24,401	0/0:25,0:23:69.22:0,69,1106	0/0:14,0:12:24.08:0,24,401	0/0:7,0:7:18.53:0,19,302
chr10	7755815	.	T	TCA	1520.73	PASS	AB=0.943;AC=17;AF=0.315;AN=54;BaseQRankSum=-0.395;DP=820;FS=3.074;HRun=0;HaplotypeScore=148.9307;InbreedingCoeff=0.4660;MQ=34.69;MQ0=90;MQRankSum=0.550;QD=5.10;ReadPosRankSum=0.502;VQSLOD=3.0088;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,3:21:2.27:0,2,37	1/1:8,1:8:8.94:93,9,0	0/0:41,0:3:9.02:0,9,102	./.	0/0:12,0:8:9.03:0,9,106	1/1:12,3:13:13.87:285,14,0	1/1:19,8:21:6.01:96,6,0	0/0:37,0:24:53.60:0,54,664	1/1:27,7:27:13.14:291,13,0	0/0:49,0:37:78.51:0,79,916	0/0:14,0:12:8.86:0,9,100	0/0:34,0:23:20.59:0,21,306	0/0:30,0:25:29.91:0,30,329	0/0:42,0:34:35.54:0,36,401	0/0:39,0:31:38.42:0,38,432	0/0:39,0:31:53.66:0,54,582	0/1:25,6:21:3.65:343,0,4	0/1:26,0:23:5.55:6,0,378	0/1:24,0:8:50.93:51,0,58	1/1:27,2:21:17.40:248,17,0	0/1:59,0:51:17.53:18,0,31	0/0:13,0:11:11.82:0,12,119	0/0:11,0:11:24.08:0,24,300	0/0:38,0:37:17.89:0,18,193	0/1:24,4:23:16.45:247,0,16	0/0:15,0:13:12.28:0,12,82	0/0:10,0:10:5.40:0,5,47	1/1:5,0:5:2.53:19,3,0
chr10	7755821	.	ACACACACT	A	1162.30	PASS	AB=0.978;AC=18;AF=0.321;AN=56;BaseQRankSum=1.466;DP=794;FS=0.000;HRun=0;HaplotypeScore=186.9339;InbreedingCoeff=0.2731;MQ=33.92;MQ0=83;MQRankSum=-1.146;QD=3.47;ReadPosRankSum=-0.719;VQSLOD=2.4492;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,1:18:0.80:0,1,38	1/1:8,0:7:9.90:98,10,0	0/0:36,0:3:9.02:0,9,102	0/1:51,0:5:0:0,0,0	0/0:14,0:9:8.76:0,9,155	1/1:15,1:14:4.10:204,4,0	0/1:26,1:21:15.89:56,0,16	0/0:31,0:22:48.05:0,48,935	1/1:27,2:22:14.62:185,15,0	0/0:49,0:38:69.46:0,69,944	0/0:13,0:12:8.72:0,9,67	0/0:37,0:25:36.17:0,36,554	0/0:32,0:26:36.98:0,37,459	0/0:41,0:32:37.72:0,38,577	0/0:34,0:30:40.71:0,41,635	0/0:38,0:31:59.34:0,59,802	0/1:31,1:21:42.40:165,0,42	0/0:29,0:23:40.35:0,40,645	0/1:24,1:8:51.23:51,0,58	1/1:24,2:20:16.34:198,16,0	0/1:61,0:45:17.46:17,0,122	0/0:16,0:13:14.69:0,15,144	0/0:10,0:10:24.08:0,24,492	0/0:50,0:39:27.31:0,27,385	0/1:25,2:24:17.91:268,0,18	0/1:14,0:11:45.63:46,0,100	0/1:11,0:10:25.07:25,0,73	1/1:4,0:5:2.58:19,3,0
chr10	7755825	.	A	ACT	656.97	PASS	AB=0.989;AC=12;AF=0.214;AN=56;BaseQRankSum=3.471;DP=754;FS=5.190;HRun=0;HaplotypeScore=152.3865;InbreedingCoeff=0.2921;MQ=32.87;MQ0=87;MQRankSum=-0.619;QD=3.22;ReadPosRankSum=1.162;VQSLOD=2.5431;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:14:4.89:0,5,70	1/1:8,0:7:6.52:33,7,0	0/0:39,0:3:9.03:0,9,133	0/0:51,0:5:5.94:0,6,41	0/0:14,0:9:8.86:0,9,106	1/1:15,0:13:18.66:154,19,0	0/1:26,0:19:19.21:41,0,19	0/0:28,0:21:62.99:0,63,859	1/1:26,0:20:9.41:132,9,0	0/0:47,0:37:87.06:0,87,1217	0/0:12,0:10:11.73:0,12,101	0/0:35,0:22:38.68:0,39,472	0/0:28,2:24:34.27:0,34,423	0/0:41,0:31:41.84:0,42,531	0/0:33,2:29:34.83:0,35,543	0/0:36,2:32:60.74:0,61,822	0/1:31,1:20:3.05:199,0,3	0/1:24,1:21:29.78:30,0,512	0/1:22,0:7:11.33:11,0,108	0/1:22,0:17:30.93:107,0,31	0/0:55,0:40:8.09:0,8,76	0/0:14,0:11:8.83:0,9,123	0/0:12,0:12:27.08:0,27,391	0/0:45,3:38:29.69:0,30,356	0/1:28,0:25:42.60:109,0,43	0/0:13,0:9:20.78:0,21,178	0/0:10,0:9:8.90:0,9,90	0/0:6,0:5:7.12:0,7,40
chr10	7755827	.	ACT	A	411.60	PASS	AB=0.939;AC=14;AF=0.250;AN=56;BaseQRankSum=3.065;DP=742;FS=3.016;HRun=0;HaplotypeScore=145.2556;InbreedingCoeff=0.0141;MQ=32.41;MQ0=91;MQRankSum=-2.659;QD=1.46;ReadPosRankSum=-4.478;VQSLOD=0.6906;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:18,1:13:2.52:0,3,57	1/1:7,1:7:9.74:60,10,0	0/0:39,0:3:8.77:0,9,118	0/1:51,0:5:0.01:0,0,0	0/0:14,0:9:8.76:0,9,159	0/1:13,1:12:18.97:19,0,51	0/1:27,1:19:17.25:28,0,17	0/0:27,0:21:57.09:0,57,869	0/1:26,0:20:37.17:37,0,76	0/0:45,0:35:70.70:0,71,1048	0/0:11,0:9:8.90:0,9,153	0/0:33,1:21:22.87:0,23,427	0/0:30,0:24:2:0,2,370	0/0:41,0:31:5.04:0,5,521	0/0:34,0:28:14.21:0,14,565	0/0:38,0:31:42.46:0,42,766	0/0:32,0:20:25.49:0,25,249	0/0:22,0:18:32.11:0,32,607	0/1:22,0:7:28.70:29,0,43	0/1:20,1:17:41.52:42,0,65	0/1:48,5:37:37.98:38,0,49	0/0:14,0:11:14.93:0,15,170	0/0:13,0:12:24.05:0,24,394	0/0:47,0:37:27.39:0,27,313	0/1:28,0:25:49.41:50,0,49	0/1:11,2:9:62.34:123,0,62	0/1:6,3:8:47.05:74,0,47	1/1:6,0:5:8.95:66,9,0
chr10	7755839	.	T	TCA	731.16	PASS	AB=0.908;AC=18;AF=0.346;AN=52;BaseQRankSum=1.550;DP=692;FS=13.579;HRun=0;HaplotypeScore=145.0376;InbreedingCoeff=-0.0601;MQ=29.67;MQ0=98;MQRankSum=-3.658;QD=1.92;ReadPosRankSum=-1.163;VQSLOD=1.7753;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:16,2:13:0.21:0,0,2	1/1:8,0:7:4.83:53,5,0	0/0:30,0:3:2.50:0,2,9	./.	0/0:11,2:8:8.75:0,9,85	0/1:15,1:13:15.92:48,0,16	1/1:27,5:24:9.02:149,9,0	0/1:27,0:20:99:122,0,101	0/0:19,6:19:10.15:0,10,82	0/1:35,2:28:97.16:97,0,257	0/0:11,2:9:5.49:0,5,24	0/1:31,4:21:45.24:45,0,194	0/1:28,4:22:56.40:175,0,56	0/1:35,6:29:30.63:31,0,140	0/1:30,1:24:19.11:19,0,128	0/1:35,3:27:21.38:21,0,168	0/0:24,4:17:5.68:0,6,85	0/0:20,1:18:0.63:0,1,178	1/1:27,0:5:3.01:48,3,0	1/1:19,2:20:0.91:4,1,0	0/0:40,0:29:5.62:0,6,75	0/0:9,5:11:14.67:0,15,144	0/0:8,3:9:3:0,3,25	0/0:45,0:32:12.76:0,13,138	0/1:13,9:19:0.56:1,0,1	0/1:11,1:7:60.95:61,0,85	0/0:5,2:7:5.81:0,6,52	./.
chr10	7755854	.	CA	C	1182.51	PASS	AB=0.947;AC=20;AF=0.385;AN=52;BaseQRankSum=0.098;DP=637;FS=2.370;HRun=2;HaplotypeScore=126.1410;InbreedingCoeff=-0.4159;MQ=25.44;MQ0=103;MQRankSum=-2.424;QD=2.98;ReadPosRankSum=-2.405;VQSLOD=-0.7351;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:14,4:13:2.80:20,3,0	0/1:8,1:8:0.55:1,0,40	0/0:34,0:1:3.01:0,3,45	./.	0/1:14,0:8:23.61:24,0,123	0/1:12,0:10:36.06:51,0,36	0/0:26,1:19:10.23:0,10,102	0/1:21,0:14:64.69:65,0,289	1/1:18,1:14:4.83:38,5,0	0/1:34,0:24:37.32:388,0,37	0/1:10,1:6:36.02:61,0,36	0/1:33,2:22:88.96:89,0,134	0/1:33,2:23:99:101,0,199	0/1:32,1:22:41.25:41,0,119	0/1:19,4:15:46.90:47,0,203	0/1:34,3:26:99:177,0,105	0/1:16,2:11:35.86:65,0,36	0/1:12,1:11:51.30:51,0,162	0/0:23,0:5:9.03:0,9,135	0/1:16,2:17:26.19:26,0,54	0/0:32,5:24:6.01:0,6,90	0/1:19,0:15:52.60:53,0,120	./.	0/0:30,7:23:8.18:0,8,134	0/1:25,1:23:6.71:29,0,7	0/0:14,0:8:5.61:0,6,195	0/0:4,2:5:3.01:0,3,45	0/0:3,0:1:3.01:0,3,45
chr10	7755855	.	A	ACAC	2749.28	PASS	AB=0.786;AC=21;AF=0.404;AN=52;BaseQRankSum=-2.381;DP=636;FS=0.685;HRun=0;HaplotypeScore=123.6048;InbreedingCoeff=-0.5277;MQ=25.05;MQ0=105;MQRankSum=-2.408;QD=6.45;ReadPosRankSum=-3.539;VQSLOD=1.4972;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,0:13:2.37:43,2,0	0/0:5,0:7:1.56:0,2,38	0/0:34,0:1:3.01:0,3,54	./.	0/1:8,2:7:58.46:58,0,155	0/1:8,3:10:34.74:82,0,35	0/1:20,1:17:17.43:17,0,71	0/1:17,0:12:99:146,0,306	1/1:14,0:14:0.08:66,0,0	0/1:9,18:23:43.85:804,0,44	0/1:9,3:7:46.42:133,0,46	0/1:22,11:24:99:165,0,149	0/1:19,9:23:99:248,0,100	0/1:19,7:23:99:106,0,136	0/1:14,4:13:99:118,0,204	0/1:23,8:25:99:406,0,135	0/1:9,2:10:45.44:120,0,45	0/1:8,1:9:89.57:90,0,205	0/0:21,0:5:9.03:0,9,142	0/1:15,1:18:24.14:63,0,24	0/0:16,0:25:5.83:0,6,112	0/1:16,3:15:99:125,0,153	./.	0/0:21,4:23:8.65:0,9,168	0/1:18,2:21:4.81:66,0,5	0/1:15,0:12:32.71:33,0,229	0/0:8,0:7:3.01:0,3,56	0/0:2,0:1:3.01:0,3,56
chr10	7755870	.	TCA	T	61.95	PASS	AB=0.899;AC=5;AF=0.096;AN=52;BaseQRankSum=2.642;DP=707;FS=2.454;HRun=0;HaplotypeScore=152.8173;InbreedingCoeff=0.0727;MQ=28.00;MQ0=88;MQRankSum=-3.215;QD=0.71;ReadPosRankSum=0.129;VQSLOD=2.8796;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:12:1.05:0,1,2	0/0:9,0:8:3.01:0,3,51	./.	./.	0/0:17,0:14:17.91:0,18,216	0/0:14,0:11:2.88:0,3,50	0/0:31,1:20:1.89:0,2,34	0/0:28,0:16:34.05:0,34,481	0/0:25,1:16:2.98:0,3,28	0/0:21,0:16:6.20:0,6,249	0/0:16,0:13:6.02:0,6,81	0/0:37,1:29:29.39:0,29,299	0/0:37,1:27:30.16:0,30,494	0/0:35,1:27:29.60:0,30,311	0/0:32,0:23:35.96:0,36,403	0/0:40,0:28:23:0,23,355	0/0:16,1:12:3.85:0,4,71	0/0:19,0:15:12.86:0,13,177	0/0:32,0:10:21.07:0,21,297	0/0:21,0:20:8.87:0,9,80	0/1:45,4:34:59.08:59,0,172	0/0:22,0:18:9.02:0,9,97	0/0:10,0:7:6.01:0,6,62	0/0:42,3:36:27.63:0,28,324	0/0:25,0:22:6.02:0,6,99	0/1:20,4:18:41.33:41,0,389	0/1:10,1:10:29.92:30,0,60	1/1:2,1:2:3.01:39,3,0
chr10	7755882	.	T	TCA	591.61	PASS	AB=0.937;AC=13;AF=0.250;AN=52;BaseQRankSum=-1.507;DP=684;FS=0.000;HRun=0;HaplotypeScore=151.5594;InbreedingCoeff=-0.2204;MQ=29.90;MQ0=60;MQRankSum=-2.423;QD=1.73;ReadPosRankSum=0.037;VQSLOD=2.5898;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:9:1.75:0,2,5	0/0:8,0:8:3.01:0,3,38	./.	./.	0/1:14,1:13:36.77:78,0,37	0/0:13,0:11:3:0,3,26	0/0:28,0:17:0.82:0,1,2	0/1:30,2:16:35.76:129,0,36	0/0:26,0:16:1.63:0,2,19	0/1:21,2:16:87.88:113,0,88	0/0:16,1:13:2.99:0,3,37	0/1:29,8:29:30.43:30,0,77	0/1:31,4:26:79.35:136,0,79	0/1:36,1:28:43.25:43,0,106	0/1:38,0:27:51.86:52,0,137	0/1:33,6:28:13.68:14,0,170	0/1:17,0:12:14.13:14,0,23	0/0:20,1:17:21.40:0,21,166	0/1:22,0:10:23.78:24,0,94	1/1:21,0:21:5.85:64,6,0	0/0:47,0:35:30.74:0,31,345	0/0:20,2:19:11.15:0,11,69	0/0:8,2:9:5.74:0,6,45	0/0:40,0:34:31.19:0,31,239	0/1:23,0:20:9.67:34,0,10	0/0:31,1:24:22.58:0,23,525	0/0:14,0:12:9.02:0,9,99	0/0:5,0:3:6.01:0,6,64
chr10	7755902	.	ACT	A	1812.69	PASS	AB=0.954;AC=28;AF=0.500;AN=56;BaseQRankSum=-1.805;DP=686;FS=5.866;HRun=0;HaplotypeScore=141.4633;InbreedingCoeff=-0.3505;MQ=40.10;MQ0=47;MQRankSum=1.170;QD=2.91;ReadPosRankSum=-3.189;VQSLOD=1.2666;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:9,0:5:0:0,0,0	0/1:6,1:7:16.58:19,0,17	0/0:12,0:6:11.92:0,12,183	0/0:17,0:2:0.47:0,0,1	0/1:21,0:18:35.75:36,0,42	0/1:12,0:9:5.81:19,0,6	0/1:19,1:11:0:0,0,0	0/1:31,0:12:7.36:7,0,157	0/0:18,2:11:6.30:0,6,66	0/1:19,1:16:57.38:57,0,117	0/1:12,0:9:13.96:14,0,40	0/1:40,3:36:78.58:79,0,107	0/1:36,1:30:49.41:49,0,210	0/1:36,0:29:69.02:69,0,83	0/1:42,1:35:93.75:94,0,150	0/1:39,0:32:10.70:11,0,246	0/0:12,2:11:2.34:0,2,27	0/1:24,2:20:38.21:107,0,38	0/1:17,1:8:1.48:70,0,1	1/1:14,4:18:4.96:23,5,0	1/1:29,39:47:31.64:414,32,0	0/1:20,1:20:28.83:29,0,82	0/1:17,0:14:28.28:28,0,66	0/1:49,1:42:95.55:96,0,187	0/1:14,1:14:7.81:76,0,8	0/1:18,15:27:4.78:483,0,5	1/1:5,11:14:9.46:106,9,0	1/1:0,8:6:6.02:73,6,0
chr10	7755937	.	T	TCA	151.27	PASS	AB=0.986;AC=14;AF=0.250;AN=56;BaseQRankSum=6.031;DP=880;FS=25.668;HRun=0;HaplotypeScore=176.2744;InbreedingCoeff=0.3507;MQ=46.99;MQ0=54;MQRankSum=3.184;QD=0.47;ReadPosRankSum=-2.042;VQSLOD=0.7144;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:10:0:0,0,0	1/1:7,0:6:4.90:21,5,0	0/0:58,0:8:10.16:0,10,98	0/1:72,0:16:7.38:7,0,122	0/0:20,1:20:33.58:0,34,430	1/1:17,0:12:10.63:43,11,0	1/1:24,0:22:8.41:51,8,0	0/0:29,0:21:51.15:0,51,641	0/1:20,1:16:14.36:14,0,83	0/0:26,1:25:2.68:0,3,551	0/0:12,0:12:26.69:0,27,349	0/0:37,3:33:27.14:0,27,758	0/0:35,1:30:47.95:0,48,588	0/0:38,2:33:30.04:0,30,387	0/0:53,1:46:63.06:0,63,782	0/0:41,0:35:76.12:0,76,975	0/1:23,0:19:14.12:14,0,44	0/0:18,1:16:23.96:0,24,293	0/1:21,0:13:17.55:83,0,18	1/1:20,0:18:9.38:41,9,0	0/1:105,3:87:21.51:22,0,1253	0/0:22,0:20:33.11:0,33,427	0/0:20,0:18:26.55:0,27,349	0/0:57,5:51:20.99:0,21,590	0/1:10,0:10:12.61:17,0,13	0/0:28,0:21:57.13:0,57,721	0/0:21,0:16:24.01:0,24,289	0/0:11,0:9:21.07:0,21,273
chr10	7755947	.	TCA	T	61.05	PASS	AB=0.994;AC=10;AF=0.179;AN=56;BaseQRankSum=-0.046;DP=1002;FS=21.137;HRun=0;HaplotypeScore=173.1203;InbreedingCoeff=-0.0190;MQ=43.52;MQ0=90;MQRankSum=0.640;QD=0.19;ReadPosRankSum=-3.361;VQSLOD=0.4513;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:15:1.55:0,2,4	0/0:8,1:8:1.16:0,1,3	0/0:48,0:6:5.85:0,6,51	0/0:64,0:15:12.93:0,13,189	0/0:24,0:21:38.82:0,39,643	0/0:18,0:12:2.30:0,2,5	0/1:29,0:27:20.61:21,0,42	0/0:30,0:20:33.96:0,34,645	0/0:26,1:20:22.96:0,23,207	0/0:28,0:24:61.12:0,61,821	0/0:14,1:13:26.65:0,27,430	0/1:46,0:37:8.17:8,0,870	0/1:41,0:36:40.50:40,0,688	0/1:43,0:34:7.65:8,0,417	0/0:59,0:49:66.10:0,66,1013	0/0:41,0:35:76.02:0,76,1205	0/0:37,0:28:28.58:0,29,236	0/1:22,0:18:16.25:16,0,294	0/1:25,1:16:12.09:12,0,44	0/0:25,1:21:5.14:0,5,38	0/0:138,0:110:99:0,137,2103	0/1:25,0:22:5.52:6,0,450	0/0:26,1:25:17.96:0,18,298	0/1:72,1:58:72.91:73,0,751	1/1:10,0:9:1.83:4,2,0	0/0:32,0:23:57.67:0,58,926	0/0:27,0:19:26.96:0,27,448	0/0:14,0:12:24.06:0,24,380
chr10	7755979	.	T	TCA	157.82	PASS	AB=0.976;AC=8;AF=0.154;AN=52;BaseQRankSum=3.171;DP=1049;FS=17.780;HRun=0;HaplotypeScore=173.4075;InbreedingCoeff=-0.0117;MQ=36.24;MQ0=134;MQRankSum=-5.230;QD=0.74;ReadPosRankSum=-3.355;VQSLOD=0.9589;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:16:1.15:3,1,0	0/1:16,0:13:3.86:4,0,66	./.	./.	0/0:23,0:19:27.51:0,28,331	0/0:19,0:12:15.05:0,15,189	0/1:59,0:37:12.89:13,0,419	0/0:38,0:17:39.06:0,39,419	0/0:34,0:24:32.65:0,33,343	0/1:33,3:29:99:194,0,259	0/0:20,4:23:15.05:0,15,195	0/0:52,0:43:61.11:0,61,653	0/0:41,0:33:42.34:0,42,502	0/0:45,0:31:18.21:0,18,245	0/0:48,0:39:25.42:0,25,333	0/0:36,0:28:42.57:0,43,510	0/0:44,0:32:35.39:0,35,412	0/0:25,0:20:16.02:0,16,320	0/0:43,1:20:38.69:0,39,431	0/0:42,0:35:15.49:0,15,195	0/0:151,1:120:99:0,132,1787	0/0:35,0:30:28.62:0,29,331	0/0:36,0:30:18.02:0,18,214	0/0:75,0:59:61.79:0,62,760	0/0:17,0:15:6.02:0,6,78	0/1:36,1:17:23.47:23,0,235	0/1:22,1:15:28.98:29,0,176	0/1:18,0:16:6.23:6,0,276
chr10	7756003	.	ACACACACACT	A	1785.87	PASS	AB=0.967;AC=12;AF=0.231;AN=52;BaseQRankSum=-1.392;DP=1092;FS=2.286;HRun=0;HaplotypeScore=248.1892;InbreedingCoeff=0.5100;MQ=35.57;MQ0=125;MQRankSum=-1.151;QD=6.47;ReadPosRankSum=-3.930;VQSLOD=1.4549;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:14:3.01:0,3,39	1/1:12,0:9:5.86:40,6,0	./.	./.	0/0:28,0:25:30.06:0,30,576	1/1:20,0:14:12:206,12,0	0/1:60,0:36:12.82:253,0,13	0/0:44,0:23:35.96:0,36,387	0/1:41,0:30:27.20:217,0,27	0/0:35,0:27:49.51:0,50,757	0/0:23,0:22:14.89:0,15,362	0/0:44,0:37:37.97:0,38,712	0/0:43,0:31:29.62:0,30,406	0/0:45,0:30:14.94:0,15,355	0/0:49,0:37:24.08:0,24,485	0/0:44,0:35:23.89:0,24,441	0/1:45,0:34:77.87:502,0,78	0/0:25,0:20:33.09:0,33,684	0/1:33,6:19:6.64:238,0,7	1/1:36,0:29:14.91:261,15,0	0/0:163,0:128:99:0,156,3270	0/0:35,0:31:32.99:0,33,741	0/0:33,0:27:20.12:0,20,582	0/0:87,0:72:98.72:0,99,1927	1/1:23,0:19:12.93:231,13,0	0/0:32,0:15:17.83:0,18,253	0/0:21,0:14:11.90:0,12,182	0/0:18,0:15:17.87:0,18,287
chr10	7756013	.	T	TCA	1826.82	PASS	AB=0.967;AC=15;AF=0.268;AN=56;BaseQRankSum=4.325;DP=1020;FS=7.727;HRun=0;HaplotypeScore=158.2602;InbreedingCoeff=-0.0217;MQ=37.28;MQ0=103;MQRankSum=-0.942;QD=3.92;ReadPosRankSum=-3.897;VQSLOD=1.3324;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:11:1.20:0,1,36	0/1:10,1:9:8.05:135,0,8	0/0:21,0:1:2.92:0,3,17	0/1:24,0:2:16.22:16,0,32	0/0:23,0:21:27.25:0,27,371	1/1:15,1:12:11.71:160,12,0	0/1:47,5:30:67.27:301,0,67	0/0:37,0:21:51.12:0,51,629	0/1:25,3:19:18.52:181,0,19	0/1:31,2:25:99:105,0,425	0/0:22,0:21:18.06:0,18,234	0/1:41,0:36:48.01:48,0,468	0/1:47,0:35:5.42:5,0,389	0/0:42,0:29:16.49:0,16,230	0/0:48,0:37:29.23:0,29,371	0/0:37,0:29:32.15:0,32,381	0/1:42,0:32:99:320,0,128	0/0:27,0:22:38.96:0,39,468	0/1:30,0:11:14.61:173,0,15	0/1:30,1:23:17.49:227,0,17	0/0:155,0:123:99:0,170,2085	0/0:32,0:30:48.03:0,48,583	0/0:34,0:29:36.06:0,36,437	0/1:87,1:73:99:115,0,1037	1/1:15,7:17:11.62:203,12,0	0/0:27,0:15:22.11:0,22,259	0/0:15,0:11:11.91:0,12,150	0/0:16,0:15:23.76:0,24,260
chr10	7756101	.	TCA	T	295.28	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.670;DP=914;FS=2.050;HRun=0;HaplotypeScore=144.5046;InbreedingCoeff=0.8886;MQ=54.65;MQ0=25;MQRankSum=-1.908;QD=15.54;ReadPosRankSum=-0.430;VQSLOD=3.5817;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,9:16:33.06:390,33,0	0/0:14,0:14:24.08:0,24,398	0/0:45,0:12:5.75:0,6,53	0/0:60,1:23:18.27:0,18,312	0/0:21,0:20:57.13:0,57,889	0/0:24,0:22:48.16:0,48,773	0/0:46,2:39:42.25:0,42,1233	0/0:30,0:28:57.15:0,57,792	0/0:21,0:20:39.07:0,39,592	0/0:30,0:26:75.24:0,75,1198	0/0:19,0:19:42.14:0,42,697	0/0:35,0:32:61.05:0,61,922	0/0:43,0:42:95.27:0,95,1449	0/0:35,1:33:33.74:0,34,1077	0/0:32,0:30:48.64:0,49,799	0/0:40,0:37:75.78:0,76,1339	0/0:35,1:34:22.12:0,22,859	0/0:18,0:16:33.11:0,33,524	0/0:28,0:20:36.10:0,36,550	0/0:24,0:24:57.17:0,57,893	0/0:81,3:73:99:0,107,1637	0/0:20,1:19:44.76:0,45,715	0/0:24,0:22:33.07:0,33,529	0/0:47,1:47:82.12:0,82,1334	0/0:36,0:36:93.14:0,93,1426	0/0:34,0:29:63.21:0,63,996	0/0:23,0:21:26.80:0,27,500	0/0:16,1:17:39.11:0,39,600
chr10	7756113	.	ACT	A	75.17	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.129;DP=849;FS=2.029;HRun=0;HaplotypeScore=138.0014;InbreedingCoeff=0.7594;MQ=54.35;MQ0=28;MQRankSum=-3.011;QD=3.76;ReadPosRankSum=-1.665;VQSLOD=2.0389;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,1:17:7.50:157,8,0	0/0:11,0:11:23.95:0,24,438	0/0:38,0:8:2.78:0,3,68	0/0:53,1:22:29.80:0,30,381	0/0:21,0:20:54.15:0,54,918	0/0:25,0:23:48.06:0,48,776	0/0:43,1:35:68.67:0,69,1326	0/0:28,0:26:63.11:0,63,907	0/0:20,0:19:32.59:0,33,617	0/0:33,0:28:80.97:0,81,1302	0/0:18,0:18:45.13:0,45,763	0/0:29,0:28:61.76:0,62,973	0/0:38,0:37:88.96:0,89,1452	0/0:37,0:35:57.46:0,57,1178	0/0:27,3:27:46.94:0,47,873	0/0:39,0:36:88.07:0,88,1490	0/0:31,0:29:21.30:0,21,874	0/0:14,0:12:33.04:0,33,478	0/0:27,0:17:39.10:0,39,597	0/0:24,0:24:56.96:0,57,935	0/0:77,0:63:99:0,104,1655	0/0:20,0:18:44.72:0,45,774	0/0:20,0:19:35.49:0,35,603	0/0:45,0:44:75.80:0,76,1374	0/0:34,0:34:84.17:0,84,1465	0/0:29,1:27:66.15:0,66,1055	0/0:23,0:21:35.64:0,36,554	0/0:17,0:17:38:0,38,562
chr10	7756695	.	CT	C	13530.92	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-4.132;DP=659;FS=27.096;HRun=10;HaplotypeScore=68.7054;InbreedingCoeff=0.9793;MQ=76.99;MQ0=0;MQRankSum=-5.317;QD=21.51;ReadPosRankSum=4.038;VQSLOD=3.7480;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,23:28:68.94:593,69,0	1/1:0,8:8:24:208,24,0	0/0:17,0:17:24.06:0,24,260	0/0:13,0:13:21.04:0,21,222	1/1:3,34:38:99:865,101,0	1/1:2,20:22:56.99:495,57,0	1/1:4,15:21:43.06:351,43,0	1/1:8,27:35:80.97:703,81,0	1/1:3,18:21:53.98:469,54,0	1/1:7,16:23:47.93:412,48,0	1/1:1,26:27:71.93:618,72,0	1/1:1,17:18:50.99:443,51,0	1/1:3,27:30:71.96:625,72,0	1/1:3,23:26:59.97:518,60,0	1/1:1,24:25:59.99:521,60,0	1/1:3,16:19:47.98:417,48,0	1/1:2,26:28:71.96:619,72,0	1/1:2,11:13:32.99:286,33,0	1/1:3,24:27:71.95:617,72,0	1/1:3,32:35:95.65:818,96,0	1/1:2,14:18:38.03:319,38,0	1/1:2,23:25:62.98:547,63,0	1/1:1,33:34:92.98:807,93,0	1/1:1,9:10:26.99:234,27,0	1/1:1,24:25:62.98:547,63,0	1/1:4,26:30:47.77:635,48,0	1/1:8,29:38:88.97:759,89,0	1/1:0,5:5:12:104,12,0
chr10	7756887	.	T	TTA	10600.03	PASS	AB=0.553;AC=24;AF=0.429;AN=56;BaseQRankSum=-17.603;DP=607;FS=0.677;HRun=0;HaplotypeScore=93.2788;InbreedingCoeff=0.8368;MQ=72.06;MQ0=1;MQRankSum=0.387;QD=35.81;ReadPosRankSum=-0.694;VQSLOD=6.6968;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:54.17:0,54,682	0/0:11,0:11:30.08:0,30,365	0/0:14,0:14:29.83:0,30,343	0/0:13,0:13:21.06:0,21,256	1/1:8,21:29:57.19:948,57,0	0/0:31,0:31:78.25:0,78,985	0/0:24,0:24:60.19:0,60,757	1/1:10,35:45:99:1730,108,0	0/0:16,0:16:45.14:0,45,568	1/1:6,29:35:84.26:1335,84,0	1/1:5,14:19:1.26:561,1,0	1/1:3,17:19:39.13:648,39,0	1/1:3,21:25:19.32:860,19,0	1/1:0,10:10:24.08:399,24,0	1/1:0,18:18:48.16:798,48,0	1/1:2,14:16:33.11:549,33,0	0/0:21,0:21:60.12:0,60,709	0/1:4,11:15:7.77:418,0,8	0/0:15,0:15:39.12:0,39,492	0/0:23,0:23:54.17:0,54,680	0/0:19,0:19:51.15:0,51,631	1/1:4,20:24:54.18:885,54,0	1/1:4,26:30:66.21:1097,66,0	0/1:1,8:9:10.77:372,0,11	0/0:24,0:24:66.18:0,66,805	0/0:30,0:30:75.24:0,75,947	0/0:38,0:38:99:0,105,1285	0/0:12,0:12:36.12:0,36,454
chr10	7758190	.	TACACACACACACACAC	T	1246.23	PASS	AB=0.900;AC=22;AF=0.440;AN=50;BaseQRankSum=3.193;DP=351;FS=13.556;HRun=0;HaplotypeScore=140.0581;InbreedingCoeff=0.4697;MQ=59.32;MQ0=13;MQRankSum=-2.666;QD=8.84;ReadPosRankSum=-1.060;VQSLOD=1.9332;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:18:3.01:90,3,0	0/0:5,0:6:8.52:0,9,167	./.	./.	0/0:16,0:15:24.08:0,24,665	0/0:7,0:8:8.39:0,8,84	./.	0/0:13,0:12:3:0,3,28	0/0:7,0:9:4.97:0,5,18	1/1:10,1:11:3.01:50,3,0	1/1:8,1:9:3.01:131,3,0	1/1:8,0:7:6.02:180,6,0	1/1:9,0:9:6.02:94,6,0	1/1:3,4:7:3.48:131,3,0	0/0:12,0:12:18.06:0,18,570	0/0:7,0:9:9.03:0,9,217	0/0:19,0:21:19.79:0,20,511	1/1:8,0:7:3.01:68,3,0	0/0:12,0:12:9.39:0,9,89	0/0:13,0:17:9.91:0,10,155	0/0:14,0:25:7.43:0,7,128	1/1:9,6:16:2.52:111,3,0	1/1:5,3:8:5.85:261,6,0	1/1:21,0:22:6.02:202,6,0	0/1:11,0:11:12.87:13,0,103	0/0:9,0:9:13.59:0,14,214	0/1:9,0:12:77.11:77,0,91	0/0:4,0:4:3.01:0,3,67
chr10	7761745	.	A	AT	21857.84	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-6.378;DP=663;FS=3.609;HRun=0;HaplotypeScore=67.6083;InbreedingCoeff=0.8769;MQ=76.43;MQ0=0;MQRankSum=-4.280;QD=34.53;ReadPosRankSum=4.782;VQSLOD=4.4781;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,37:38:99:1405,105,0	1/1:0,16:16:42.03:540,42,0	0/0:16,0:14:14.14:0,14,199	0/0:14,0:13:2.23:0,2,171	1/1:1,23:24:68.87:817,69,0	1/1:1,32:33:81.27:1102,81,0	1/1:0,22:22:45.15:613,45,0	1/1:0,35:35:99:1280,102,0	1/1:1,27:28:69.23:939,69,0	1/1:0,28:28:81.19:1008,81,0	1/1:0,20:20:57.06:750,57,0	1/1:0,23:23:54.18:735,54,0	1/1:0,22:22:51.17:694,51,0	1/1:0,28:28:69.23:935,69,0	1/1:0,28:28:66:899,66,0	1/1:5,17:22:61.59:791,62,0	1/1:0,23:23:63.21:857,63,0	1/1:0,23:23:57.19:776,57,0	1/1:1,24:24:72.18:914,72,0	1/1:0,17:17:50.86:595,51,0	1/1:2,17:19:57.12:737,57,0	1/1:0,17:17:45.15:612,45,0	1/1:0,27:27:66.12:874,66,0	1/1:0,21:21:51.17:694,51,0	1/1:1,29:30:81.27:1103,81,0	1/1:1,23:24:68.70:888,69,0	1/1:1,29:30:69.23:933,69,0	1/1:0,10:10:27.09:367,27,0
chr10	7762709	.	ATGTGTGTG	A	4586.86	PASS	AB=0.767;AC=40;AF=0.833;AN=48;BaseQRankSum=2.402;DP=643;FS=2.051;HRun=0;HaplotypeScore=202.4657;InbreedingCoeff=0.0999;MQ=64.96;MQ0=7;MQRankSum=-0.102;QD=9.03;ReadPosRankSum=1.204;VQSLOD=3.8791;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:41,0:44:17.97:193,18,0	0/1:12,1:13:9.45:38,0,9	./.	0/0:24,0:21:0.89:0,1,2	./.	1/1:11,5:17:6.49:150,6,0	0/0:10,3:14:0:0,0,0	./.	1/1:14,1:16:7.24:60,7,0	0/1:16,9:24:21.34:345,0,21	1/1:6,7:14:3.01:56,3,0	1/1:17,15:34:30.57:722,31,0	1/1:9,8:17:11.19:297,11,0	1/1:17,5:24:9.03:205,9,0	1/1:15,13:30:20.97:482,21,0	0/1:13,2:24:4.21:232,0,4	1/1:22,3:26:12.81:214,13,0	1/1:8,5:14:4.31:128,4,0	1/1:15,3:17:5.71:146,6,0	1/1:20,7:29:5.10:102,5,0	1/1:22,0:32:6.02:104,6,0	0/1:11,7:18:0:0,0,0	./.	1/1:19,18:37:2.63:74,3,0	1/1:11,7:19:9.50:200,10,0	1/1:20,0:30:24.08:521,24,0	1/1:16,2:19:6.02:131,6,0	1/1:4,0:4:9.03:188,9,0
chr10	7762760	.	C	CGCGT	3984.70	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=7.146;DP=653;FS=8.918;HRun=0;HaplotypeScore=211.7826;InbreedingCoeff=0.8982;MQ=58.17;MQ0=8;MQRankSum=0.562;QD=20.12;ReadPosRankSum=0.315;VQSLOD=2.3778;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,27:36:2.88:74,3,0	1/1:8,0:8:2.51:64,3,0	0/0:11,0:4:7.56:0,8,71	0/0:17,0:10:7:0,7,60	0/0:19,0:19:18:0,18,243	1/1:18,0:19:36.10:657,36,0	1/1:19,0:19:24.08:520,24,0	0/0:23,0:23:64.65:0,65,1064	1/1:13,0:12:15.02:229,15,0	0/0:20,0:19:48.14:0,48,833	0/0:17,0:17:27.09:0,27,487	0/0:41,0:41:87.21:0,87,1468	0/0:24,0:24:53.98:0,54,808	0/0:24,0:24:46.79:0,47,809	0/0:36,0:36:69.22:0,69,1207	0/0:30,0:30:9.51:0,10,1173	1/1:21,5:27:50.81:804,51,0	0/0:12,0:12:26.98:0,27,451	1/1:17,0:16:44.71:543,45,0	1/1:31,0:30:35.70:589,36,0	0/0:35,0:35:37.66:0,38,632	0/0:24,0:24:57.07:0,57,918	0/0:21,0:21:24.04:0,24,413	0/0:50,0:49:66.09:0,66,1133	1/1:28,0:28:29.56:504,30,0	0/0:29,0:28:59.30:0,59,899	0/0:17,0:17:41.42:0,41,628	0/0:4,0:4:12:0,12,160
chr10	7762774	.	TC	T	4271.14	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=2.798;DP=688;FS=8.738;HRun=2;HaplotypeScore=182.7281;InbreedingCoeff=0.9720;MQ=76.05;MQ0=2;MQRankSum=-2.668;QD=22.60;ReadPosRankSum=-0.114;VQSLOD=3.5526;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:23.24:0,23,302	1/1:1,12:13:21.03:273,21,0	0/0:21,1:16:43.30:0,43,581	0/0:28,0:22:60.20:0,60,858	0/0:13,0:13:33.06:0,33,449	1/1:1,22:23:42.14:545,42,0	1/1:3,18:21:29.71:389,30,0	0/0:31,0:31:87.28:0,87,1269	1/1:1,12:13:24.08:312,24,0	0/0:18,0:18:54.18:0,54,796	0/0:12,0:12:33.11:0,33,495	0/0:37,0:37:90.26:0,90,1322	0/0:26,0:26:69.23:0,69,1032	0/0:25,0:25:69.19:0,69,1009	0/0:40,0:40:90.18:0,90,1269	0/0:33,1:34:60.29:0,60,1333	1/1:1,31:32:61.55:746,62,0	0/0:13,0:13:33.11:0,33,488	1/1:1,17:18:51.12:643,51,0	1/1:3,33:36:63.20:819,63,0	0/0:37,0:37:78.58:0,79,1044	0/0:24,0:24:66.22:0,66,989	0/0:25,1:26:6.19:0,6,590	0/0:40,0:40:83.58:0,84,1259	1/1:2,31:33:41.64:545,42,0	0/0:18,0:17:51.17:0,51,764	0/0:18,0:18:51.17:0,51,757	0/0:4,0:4:9.03:0,9,135
chr10	7765701	.	GA	G	269.93	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.407;DP=391;FS=4.366;HRun=10;HaplotypeScore=43.1165;InbreedingCoeff=0.7918;MQ=58.03;MQ0=9;MQRankSum=0.606;QD=13.50;ReadPosRankSum=1.747;VQSLOD=3.2335;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,18:20:41.97:365,42,0	0/0:7,0:6:8.98:0,9,86	0/0:5,0:5:15.01:0,15,154	0/0:5,0:4:9.42:0,9,66	0/0:17,0:16:33.08:0,33,358	0/0:9,0:9:24.06:0,24,265	0/0:10,0:9:21.06:0,21,232	0/0:24,2:25:33.90:0,34,572	0/0:13,1:14:36.10:0,36,397	0/0:14,0:14:36.08:0,36,389	0/0:15,0:15:45.12:0,45,498	0/0:9,0:9:21.06:0,21,232	0/0:16,0:16:45.12:0,45,498	0/0:16,0:16:44.95:0,45,479	0/0:12,0:12:30.08:0,30,332	0/0:14,1:14:10.04:0,10,339	0/0:26,0:26:66.18:0,66,730	0/0:16,0:16:28.59:0,29,478	0/0:21,0:20:57.15:0,57,624	0/0:19,0:18:51.14:0,51,563	0/0:8,0:8:21.06:0,21,232	0/0:10,0:10:18.05:0,18,197	0/0:14,0:14:28.30:0,28,292	0/0:13,0:13:30.08:0,30,332	0/0:16,0:16:35.80:0,36,363	0/0:13,0:13:36.09:0,36,391	0/0:19,0:17:39.57:0,40,429	0/0:4,0:4:9.02:0,9,99
chr10	7768635	.	T	TAGTG	41669.94	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-3.243;DP=744;FS=1.903;HRun=0;HaplotypeScore=127.1124;InbreedingCoeff=0.9149;MQ=86.68;MQ0=0;MQRankSum=-11.375;QD=60.65;ReadPosRankSum=5.627;VQSLOD=6.3013;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,25:30:63.22:1662,63,0	1/1:1,10:11:30.10:792,30,0	0/0:37,0:37:99:0,99,1732	0/0:20,0:20:42.13:0,42,706	1/1:6,33:43:78.11:2056,78,0	1/1:1,25:27:66.23:1741,66,0	1/1:6,11:17:30.10:790,30,0	1/1:15,23:42:96.27:2250,96,0	1/1:5,23:28:69.24:1819,69,0	1/1:3,41:45:99:3254,126,0	1/1:6,24:31:72.25:1887,72,0	1/1:7,13:21:45.15:1181,45,0	1/1:5,20:26:60.21:1540,60,0	1/1:5,13:20:42.14:1106,42,0	1/1:2,19:21:57.20:1503,57,0	1/1:6,25:30:69.24:1819,69,0	1/1:1,12:13:33.11:870,33,0	1/1:1,2:3:3.01:79,3,0	1/1:4,13:18:48.14:1191,48,0	1/1:7,37:46:99:2612,99,0	1/1:7,18:25:45.15:1188,45,0	1/1:1,29:31:84.29:2216,84,0	1/1:6,25:31:72.25:1901,72,0	1/1:2,11:13:30.10:792,30,0	1/1:3,21:25:60.21:1575,60,0	1/1:8,31:40:99:2615,102,0	1/1:4,32:40:99:2598,99,0	1/1:1,8:9:24.08:634,24,0
chr10	7768784	.	TATCC	T	7450.94	PASS	AB=0.603;AC=32;AF=0.571;AN=56;BaseQRankSum=3.848;DP=731;FS=0.000;HRun=0;HaplotypeScore=140.9375;InbreedingCoeff=0.8195;MQ=60.23;MQ0=10;MQRankSum=4.293;QD=17.09;ReadPosRankSum=3.125;VQSLOD=4.5848;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:41,0:40:9.03:131,9,0	0/0:15,0:15:30.09:0,30,648	0/0:50,0:36:77.70:0,78,1465	0/0:53,0:32:60.13:0,60,1174	1/1:21,0:20:23.88:392,24,0	0/0:26,0:26:59.23:0,59,1247	0/0:18,0:18:42.08:0,42,912	1/1:9,16:25:48.15:780,48,0	0/0:26,0:26:69.24:0,69,1563	1/1:11,20:30:4.88:913,5,0	1/1:14,3:17:33.07:541,33,0	1/1:8,23:31:13.22:168,13,0	1/1:20,3:23:5.13:680,5,0	1/1:26,4:30:13.41:808,13,0	1/1:25,0:23:30.04:416,30,0	1/1:35,0:34:6.02:93,6,0	0/0:17,0:17:33.09:0,33,712	1/1:16,0:15:12.74:369,13,0	0/0:17,0:16:30.09:0,30,636	0/0:21,0:21:42.13:0,42,958	1/1:4,25:29:12.04:206,12,0	0/1:12,24:36:0.43:280,0,0	0/1:7,13:20:8.43:140,0,8	1/1:16,1:17:10.48:312,10,0	0/0:28,0:28:48.14:0,48,1085	1/1:7,17:24:51.17:862,51,0	0/0:24,0:24:61.72:0,62,901	1/1:0,15:15:21.07:359,21,0
chr10	7768797	.	ATCCACCAT	A	6349.84	PASS	AB=0.943;AC=23;AF=0.411;AN=56;BaseQRankSum=-1.068;DP=775;FS=2.228;HRun=0;HaplotypeScore=184.1337;InbreedingCoeff=0.0159;MQ=54.67;MQ0=65;MQRankSum=2.025;QD=12.33;ReadPosRankSum=4.213;VQSLOD=3.7183;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:7,39:42:6.93:173,7,0	0/0:16,0:16:29.80:0,30,908	0/0:44,0:27:77.43:0,77,1464	0/0:47,0:24:60.13:0,60,1171	1/1:2,0:23:23.43:391,23,0	0/0:29,0:27:62.24:0,62,1507	0/0:15,0:16:42.08:0,42,961	1/1:34,0:22:48.15:780,48,0	0/0:24,0:23:69.24:0,69,2047	0/1:30,0:28:99:779,0,349	0/1:24,0:25:99:490,0,179	0/1:31,0:32:99:122,0,346	0/1:25,0:27:99:464,0,400	0/1:30,0:29:99:710,0,428	1/1:2,22:22:29.72:874,30,0	1/1:0,0:34:9:151,9,0	0/0:19,0:17:33.09:0,33,868	0/1:16,0:16:99:345,0,258	0/0:23,0:16:42.11:0,42,858	0/0:18,0:18:54.17:0,54,1471	0/1:41,0:36:31.99:32,0,372	0/1:31,0:35:99:222,0,121	0/1:17,0:20:84.92:85,0,132	0/1:15,0:16:99:172,0,271	0/0:24,0:22:48.14:0,48,1242	0/1:25,0:21:99:411,0,259	0/1:28,0:27:71.80:72,0,854	0/1:16,0:16:78.03:78,0,118
chr10	7768798	.	TCCA	T	1610.14	PASS	AB=0.995;AC=28;AF=0.500;AN=56;BaseQRankSum=9.871;DP=777;FS=3.198;HRun=0;HaplotypeScore=153.7497;InbreedingCoeff=0.3218;MQ=54.64;MQ0=66;MQRankSum=3.551;QD=3.11;ReadPosRankSum=3.392;VQSLOD=2.5214;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:47,0:42:4.99:46,5,0	0/0:16,0:16:29.06:0,29,410	0/0:42,0:25:53.49:0,53,670	0/0:46,0:24:56.68:0,57,712	0/1:24,0:23:10.56:38,0,11	0/0:29,0:27:53.03:0,53,695	0/0:17,0:17:3.43:0,3,565	0/1:35,0:22:81.54:82,0,100	0/0:25,0:24:72.24:0,72,1211	0/1:35,0:28:27.23:106,0,27	1/1:24,3:25:1.89:204,2,0	1/1:32,1:32:4.63:104,5,0	1/1:25,2:27:9.40:227,9,0	1/1:31,0:30:12.92:205,13,0	1/1:24,0:22:28.99:179,29,0	1/1:34,0:34:8.56:55,9,0	0/0:19,0:17:30.10:0,30,434	1/1:17,0:16:11.33:131,11,0	0/0:22,0:15:33.68:0,34,513	0/0:19,0:18:51.12:0,51,795	0/1:41,0:36:55.84:56,0,182	0/1:36,0:35:28.07:28,0,35	0/1:21,1:21:34.28:80,0,34	1/1:14,2:16:17.48:106,17,0	0/0:24,0:22:41.47:0,41,640	0/1:25,0:21:76.05:100,0,76	0/1:28,0:27:4.59:5,0,292	1/1:16,0:16:4.78:50,5,0
chr10	7768801	.	A	ACCAT	2958.39	PASS	AB=0.931;AC=27;AF=0.540;AN=50;BaseQRankSum=-3.800;DP=776;FS=2.902;HRun=0;HaplotypeScore=162.5257;InbreedingCoeff=0.5388;MQ=54.67;MQ0=66;MQRankSum=1.936;QD=7.16;ReadPosRankSum=-1.399;VQSLOD=2.7491;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:42:3:0,3,27	1/1:5,10:15:12.04:278,12,0	./.	./.	0/1:25,0:24:0:0,0,0	1/1:15,10:24:12.04:278,12,0	1/1:17,0:18:4.26:45,4,0	./.	0/0:28,0:27:27.06:0,27,360	1/1:31,0:29:21.96:143,22,0	0/1:22,0:24:24.31:346,0,24	1/1:31,0:32:26.99:429,27,0	0/1:25,0:27:7.92:280,0,8	1/1:28,0:29:24.96:330,25,0	0/0:24,0:22:29.47:0,29,247	0/1:34,0:34:18.84:19,0,22	1/1:9,9:21:9.03:208,9,0	1/1:15,0:17:3.33:112,3,0	0/0:22,0:15:9:0,9,106	0/0:20,0:19:21.05:0,21,292	0/0:39,0:36:23.68:0,24,341	0/1:30,0:35:16.76:17,0,31	1/1:19,0:22:7.23:159,7,0	1/1:16,0:17:23.98:289,24,0	1/1:15,11:24:9.03:208,9,0	0/0:26,0:22:27.09:0,27,367	0/0:11,0:24:33.66:0,34,307	0/0:16,0:16:18.02:0,18,213
chr10	7769796	.	T	TA	17344.62	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-8.756;DP=551;FS=10.383;HRun=5;HaplotypeScore=48.6693;InbreedingCoeff=0.9878;MQ=87.57;MQ0=0;MQRankSum=-9.452;QD=33.88;ReadPosRankSum=5.118;VQSLOD=4.3674;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,7:7:21.07:276,21,0	1/1:0,6:6:18.06:237,18,0	0/0:19,0:19:45.08:0,45,479	0/0:20,0:20:48.88:0,49,490	1/1:2,26:28:75.24:987,75,0	1/1:1,30:31:78.25:1026,78,0	1/1:1,10:11:30.10:395,30,0	1/1:5,30:35:87.27:1129,87,0	1/1:3,13:16:30.10:395,30,0	1/1:5,21:26:66.18:846,66,0	1/1:1,22:23:66.09:810,66,0	1/1:1,18:19:48.16:632,48,0	1/1:2,21:23:57.19:750,57,0	1/1:2,14:16:39.13:513,39,0	1/1:0,15:15:42.14:553,42,0	1/1:0,15:15:39.13:513,39,0	1/1:1,14:15:39.13:513,39,0	1/1:0,7:7:18.06:237,18,0	1/1:0,26:26:78.25:1026,78,0	1/1:3,38:41:99:1456,111,0	1/1:0,10:10:27.09:355,27,0	1/1:4,18:22:42.14:553,42,0	1/1:0,28:28:81.26:1066,81,0	1/1:0,10:10:27.09:355,27,0	1/1:3,25:27:69.22:908,69,0	1/1:2,16:18:48.16:632,48,0	1/1:2,23:25:60.19:788,60,0	1/1:1,10:11:30.10:395,30,0
chr10	7775378	.	A	AT	1590.93	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=-7.468;DP=592;FS=6.526;HRun=7;HaplotypeScore=82.4774;InbreedingCoeff=-0.1264;MQ=67.55;MQ0=0;MQRankSum=-0.747;QD=5.30;ReadPosRankSum=-4.509;VQSLOD=-0.7006;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,36:38:96.29:1159,96,0	0/0:10,0:10:27.04:0,27,260	0/1:8,0:7:2.24:2,0,30	0/1:8,0:9:6.81:7,0,36	0/1:30,0:30:39.76:85,0,40	0/0:27,0:26:81.11:0,81,774	0/0:20,0:20:54.02:0,54,506	0/1:37,0:36:23.08:103,0,23	0/0:13,0:13:39.04:0,39,369	0/1:16,0:16:11.06:34,0,11	0/0:20,1:21:1.49:0,1,38	0/0:19,0:19:27.14:0,27,82	0/0:20,0:20:21.80:0,22,57	0/1:15,0:15:3.37:3,0,23	0/1:14,0:14:4.79:5,0,27	0/1:18,0:18:14.50:52,0,14	0/0:20,0:20:54.03:0,54,502	0/1:23,0:23:9.02:9,0,68	0/0:18,0:18:38.09:0,38,353	0/0:34,0:34:96.09:0,96,904	0/1:21,0:21:36.10:50,0,36	0/1:27,0:27:31.74:85,0,32	0/1:21,0:21:30.49:74,0,30	0/0:23,0:23:19.90:0,20,67	0/0:22,0:22:53.68:0,54,488	0/1:23,0:23:12.34:76,0,12	0/0:31,0:31:32.43:0,32,131	0/0:14,0:14:22.95:0,23,92
chr10	7776241	.	CT	C	517.59	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.973;DP=476;FS=2.028;HRun=5;HaplotypeScore=44.6473;InbreedingCoeff=0.9630;MQ=74.29;MQ0=0;MQRankSum=-1.056;QD=25.88;ReadPosRankSum=0.427;VQSLOD=2.4348;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,20:20:54.15:612,54,0	0/0:6,0:6:15.05:0,15,204	0/0:20,0:20:57.19:0,57,767	0/0:16,0:16:21.85:0,22,332	0/0:23,0:23:60.18:0,60,797	0/0:16,0:16:48.15:0,48,640	0/0:26,0:26:75.21:0,75,992	0/0:30,0:30:84.26:0,84,1121	0/0:11,0:11:33.11:0,33,451	0/0:20,0:20:60.18:0,60,792	0/0:16,0:16:45.15:0,45,616	0/0:12,0:12:36.12:0,36,493	0/0:17,0:17:51.16:0,51,682	0/0:11,0:11:33.11:0,33,451	0/0:14,0:14:39.13:0,39,532	0/0:12,0:12:33.11:0,33,452	0/0:28,0:28:75.24:0,75,1009	0/0:19,0:19:51.17:0,51,698	0/0:16,0:16:36.12:0,36,492	0/0:25,0:25:69.22:0,69,928	0/0:17,0:17:48.16:0,48,656	0/0:9,0:9:24.08:0,24,328	0/0:17,0:17:51.17:0,51,697	0/0:6,0:6:15.05:0,15,205	0/0:16,0:16:45.14:0,45,599	0/0:13,0:13:36.10:0,36,475	0/0:26,0:26:72.23:0,72,967	0/0:14,0:14:33.11:0,33,451
chr10	7776901	.	G	GA	28604.78	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=0.296;DP=799;FS=8.171;HRun=5;HaplotypeScore=134.0051;InbreedingCoeff=0.9978;MQ=72.30;MQ0=0;MQRankSum=-6.857;QD=37.84;ReadPosRankSum=5.503;VQSLOD=2.6364;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,54:57:99:2057,147,0	1/1:0,12:12:36.12:504,36,0	0/0:23,0:23:50.76:0,51,570	0/0:20,0:20:48.06:0,48,539	1/1:1,30:31:81.23:1107,81,0	1/1:2,19:21:57.19:798,57,0	1/1:0,25:25:66.22:923,66,0	1/1:2,29:31:87.29:1213,87,0	1/1:2,30:32:84.28:1176,84,0	1/1:2,44:46:99:1782,129,0	1/1:1,32:33:99:1372,99,0	1/1:1,20:21:48.16:672,48,0	1/1:0,34:34:96.17:1343,96,0	1/1:1,27:28:78.26:1090,78,0	1/1:0,28:28:84.28:1176,84,0	1/1:1,31:32:87.29:1219,87,0	1/1:1,39:40:99:1660,120,0	1/1:0,26:26:72.24:1008,72,0	1/1:2,18:20:51.17:713,51,0	1/1:0,32:32:93.31:1288,93,0	1/1:6,33:39:78.26:1092,78,0	1/1:2,23:25:69.18:930,69,0	1/1:1,31:32:87.29:1218,87,0	1/1:3,36:39:99:1386,99,0	1/1:1,16:17:42.14:588,42,0	1/1:0,24:24:72.22:990,72,0	1/1:0,24:23:72.24:1005,72,0	1/1:0,7:7:21.07:294,21,0
chr10	7777737	.	T	TC	21806.45	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-8.549;DP=621;FS=8.067;HRun=3;HaplotypeScore=56.9865;InbreedingCoeff=0.9876;MQ=89.13;MQ0=0;MQRankSum=-9.667;QD=37.86;ReadPosRankSum=6.079;VQSLOD=4.4929;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,32:35:84.28:1169,84,0	1/1:2,6:8:15.05:210,15,0	0/0:23,0:23:51.17:0,51,685	0/0:22,0:22:19.74:0,20,401	1/1:2,31:33:78.19:1068,78,0	1/1:0,23:23:60.20:840,60,0	1/1:0,24:24:60.20:840,60,0	1/1:0,20:20:60.20:839,60,0	1/1:0,18:18:48.16:672,48,0	1/1:1,18:19:54.17:737,54,0	1/1:3,21:24:57.19:797,57,0	1/1:1,25:26:75.25:1050,75,0	1/1:0,24:24:66.22:923,66,0	1/1:0,12:12:36.12:504,36,0	1/1:0,24:24:57.19:798,57,0	1/1:0,28:28:84.28:1176,84,0	1/1:0,11:11:30.10:420,30,0	1/1:0,13:13:33.11:458,33,0	1/1:1,28:29:84.28:1175,84,0	1/1:0,26:26:78.22:1064,78,0	1/1:0,22:22:63.21:882,63,0	1/1:0,21:21:57.19:796,57,0	1/1:0,22:22:60.20:840,60,0	1/1:2,17:19:48.16:672,48,0	1/1:0,28:28:84.28:1176,84,0	1/1:1,30:31:93.28:1275,93,0	1/1:1,27:28:78.05:1088,78,0	1/1:0,8:8:24.08:336,24,0
chr10	7778665	.	CGG	C	5911.64	PASS	AB=0.861;AC=50;AF=0.893;AN=56;BaseQRankSum=1.595;DP=489;FS=3.069;HRun=13;HaplotypeScore=113.1424;InbreedingCoeff=0.5970;MQ=69.29;MQ0=0;MQRankSum=-1.899;QD=13.23;ReadPosRankSum=5.592;VQSLOD=3.7617;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:20:9.43:0,9,70	1/1:3,0:10:16.20:68,16,0	0/1:9,0:10:11.28:11,0,127	0/0:21,0:20:22.53:0,23,310	1/1:15,5:22:29.31:230,29,0	1/1:5,0:18:37.84:159,38,0	1/1:7,0:22:41.12:178,41,0	1/1:9,10:19:29.93:276,30,0	1/1:5,0:15:27.12:115,27,0	1/1:10,9:22:29.37:267,29,0	1/1:9,10:20:41.79:386,42,0	1/1:4,12:16:32.91:298,33,0	1/1:13,9:23:32.70:293,33,0	1/1:5,9:15:32.78:301,33,0	1/1:7,15:23:50.52:469,51,0	1/1:6,17:24:56.75:524,57,0	1/1:6,0:19:37.68:160,38,0	1/1:2,7:10:23.77:216,24,0	1/1:11,0:16:13.66:59,14,0	1/1:5,0:19:29.91:128,30,0	0/1:8,5:13:6.59:127,0,7	1/1:7,4:11:17.95:162,18,0	1/1:10,7:17:13.69:201,14,0	1/1:10,10:22:38.51:343,39,0	1/1:5,0:16:32.58:138,33,0	1/1:8,8:16:26.96:254,27,0	1/1:13,8:23:53.13:492,53,0	1/1:5,1:6:5.97:58,6,0
chr10	7778677	.	GGT	G	1281.23	PASS	AB=0.883;AC=17;AF=0.304;AN=56;BaseQRankSum=5.072;DP=489;FS=42.062;HRun=0;HaplotypeScore=115.5744;InbreedingCoeff=-0.4562;MQ=71.41;MQ0=0;MQRankSum=-1.603;QD=4.13;ReadPosRankSum=10.721;VQSLOD=-0.3122;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:30:0,30,279	0/0:8,0:8:15.77:0,16,70	0/0:13,0:13:34.02:0,34,330	0/0:17,1:17:1.59:0,2,390	0/1:12,5:17:91.74:109,0,92	0/0:20,0:20:11.14:0,11,166	0/0:21,0:21:35.53:0,36,180	0/1:21,2:23:54.21:54,0,247	0/0:20,0:20:36.24:0,36,285	0/1:20,0:20:15.79:16,0,137	0/1:16,3:19:71.19:152,0,71	0/1:19,1:20:90.83:91,0,91	0/1:20,3:23:99:102,0,131	0/1:13,2:15:45.37:79,0,45	0/1:21,3:24:65.72:112,0,66	0/1:27,3:30:96.43:96,0,152	0/0:19,0:19:6.89:0,7,134	0/1:10,0:10:26.65:35,0,27	0/0:12,0:12:16.06:0,16,151	0/0:18,0:18:27:0,27,134	0/1:14,1:15:16.33:16,0,112	0/1:8,3:11:53.13:85,0,53	0/1:18,1:19:71.03:71,0,141	0/1:15,4:19:20.66:82,0,21	0/0:16,0:16:12.69:0,13,101	0/1:11,1:12:33.16:46,0,33	0/1:21,9:30:99:260,0,160	0/1:2,1:3:14.06:31,0,14
chr10	7778789	.	ATT	A	6012.14	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-0.375;DP=525;FS=7.434;HRun=15;HaplotypeScore=79.4576;InbreedingCoeff=0.8052;MQ=71.60;MQ0=2;MQRankSum=-1.247;QD=12.96;ReadPosRankSum=3.914;VQSLOD=3.8890;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:19:35.56:0,36,418	1/1:2,1:14:27.65:132,28,0	0/0:26,0:14:11.29:0,11,95	0/0:15,0:7:14.03:0,14,126	1/1:9,16:27:46.92:378,47,0	1/1:7,1:24:41.31:191,41,0	1/1:3,0:16:32.90:141,33,0	1/1:10,28:40:86.27:729,86,0	1/1:0,0:10:13.72:59,14,0	1/1:5,17:25:31.96:350,32,0	1/1:2,11:15:32.60:269,33,0	1/1:4,8:13:5.76:199,6,0	1/1:7,11:19:29.58:249,30,0	1/1:3,5:9:5.75:97,6,0	1/1:7,14:22:4.68:256,5,0	1/1:2,17:20:41.70:355,42,0	1/1:7,0:26:41.01:176,41,0	1/1:4,19:24:41.63:355,42,0	1/1:5,0:17:30.25:132,30,0	1/1:7,0:26:43.74:188,44,0	1/1:1,8:9:23.99:211,24,0	1/1:6,12:20:26.49:267,26,0	1/1:4,11:16:23.85:198,24,0	1/1:2,7:11:26.44:208,26,0	1/1:3,1:13:22.16:109,22,0	1/1:5,16:21:47.90:411,48,0	1/1:6,12:21:29.21:279,29,0	1/1:1,3:5:2.85:71,3,0
chr10	7782331	.	A	ATGTAACACCTAGG	68614.35	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-7.903;DP=659;FS=32.472;HRun=0;HaplotypeScore=160.5282;InbreedingCoeff=0.9522;MQ=82.24;MQ0=0;MQRankSum=-11.642;QD=113.41;ReadPosRankSum=5.919;VQSLOD=3.3063;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,17:41:60.21:3164,60,0	1/1:3,5:12:23.57:1246,24,0	0/0:23,0:23:66.19:0,66,1945	0/0:31,0:31:87.22:0,87,2542	1/1:11,8:24:45.02:2003,45,0	1/1:2,9:19:33.11:1909,33,0	1/1:7,12:28:48.16:3017,48,0	1/1:22,5:40:99:6397,120,0	1/1:3,12:19:36.12:2400,36,0	1/1:3,11:20:57.13:3003,57,0	1/1:3,9:16:42.14:2089,42,0	1/1:8,14:27:66.23:4212,66,0	1/1:6,18:29:66.23:4134,66,0	1/1:8,19:34:78.27:4758,78,0	1/1:11,12:34:66.23:3840,66,0	1/1:5,17:29:63.22:4076,63,0	1/1:7,5:19:24.08:1247,24,0	1/1:3,2:16:12.04:752,12,0	1/1:3,4:14:42.14:2423,42,0	1/1:6,9:28:48.12:2371,48,0	1/1:5,2:12:15.05:519,15,0	1/1:7,6:20:33.11:1830,33,0	1/1:6,11:30:47.76:2782,48,0	1/1:4,4:14:15.52:915,16,0	1/1:5,13:23:48.16:2876,48,0	1/1:3,9:20:57.17:2789,57,0	1/1:9,11:32:50.75:3063,51,0	1/1:0,4:5:12.04:801,12,0
chr10	7784211	.	A	AGGAGAAGG	7604.73	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-6.080;DP=504;FS=2.555;HRun=0;HaplotypeScore=127.2647;InbreedingCoeff=0.9840;MQ=70.57;MQ0=2;MQRankSum=-11.373;QD=53.93;ReadPosRankSum=-3.610;VQSLOD=4.3092;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:63.22:0,63,1644	1/1:3,1:4:12.03:283,12,0	0/0:23,0:19:20.75:0,21,435	0/0:24,0:24:33.46:0,33,526	0/0:20,0:20:51.16:0,51,1191	1/1:4,13:18:36.12:1440,36,0	1/1:10,12:24:30.10:1187,30,0	0/0:17,0:17:12.03:0,12,245	1/1:2,9:14:30.10:1243,30,0	0/0:15,0:15:42.13:0,42,959	0/0:18,0:18:51.16:0,51,1222	0/0:25,0:25:69.21:0,69,1684	0/0:13,0:13:33.11:0,33,802	0/0:12,0:12:30.10:0,30,779	0/0:18,0:18:48.16:0,48,1248	0/0:15,0:15:36.10:0,36,806	1/1:9,11:23:18.06:662,18,0	0/0:9,0:9:18.03:0,18,413	1/1:19,1:19:30.09:918,30,0	1/1:2,14:20:29.94:765,30,0	0/0:32,0:32:72.25:0,72,1832	0/0:10,0:10:24.07:0,24,541	0/0:10,0:10:18.06:0,18,440	0/0:19,0:19:42.13:0,42,1024	1/1:11,7:18:48.04:1106,48,0	0/0:21,0:21:48.15:0,48,1119	0/0:19,0:19:48.15:0,48,1194	0/0:15,0:15:36.05:0,36,722
chr10	7784290	.	GAATTAATT	G	7423.61	PASS	AC=36;AF=0.783;AN=46;BaseQRankSum=-0.323;DP=349;FS=5.014;HRun=0;HaplotypeScore=106.2807;InbreedingCoeff=0.7858;MQ=48.88;MQ0=2;MQRankSum=-3.713;QD=25.25;ReadPosRankSum=-0.984;VQSLOD=4.0368;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:2,0:11:20.11:389,20,0	1/1:7,0:16:19.82:340,20,0	./.	./.	1/1:8,13:21:33.07:717,33,0	1/1:2,0:8:18.04:303,18,0	./.	1/1:26,6:31:15.04:301,15,0	1/1:8,0:13:16.87:284,17,0	1/1:7,9:16:27.09:679,27,0	1/1:6,7:13:18.06:409,18,0	0/0:9,0:12:8.99:0,9,74	0/0:3,0:5:5.99:0,6,49	0/0:2,0:5:8.99:0,9,74	1/1:8,7:15:18.06:412,18,0	1/1:5,6:11:15.05:377,15,0	1/1:8,0:11:6.02:112,6,0	1/1:5,5:10:9.03:227,9,0	1/1:16,0:22:14.24:190,14,0	1/1:10,0:19:27.01:357,27,0	./.	./.	0/0:5,0:6:3:0,3,25	0/0:2,0:3:3:0,3,25	1/1:9,0:19:26.29:423,26,0	1/1:9,9:18:27.09:680,27,0	1/1:7,12:19:30.10:734,30,0	1/1:12,7:19:21.07:489,21,0
chr10	7787494	.	GAACTCTGTGTATGTTTCT	G	12220.39	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=13.779;DP=647;FS=4.685;HRun=0;HaplotypeScore=311.4161;InbreedingCoeff=0.9914;MQ=82.42;MQ0=1;MQRankSum=-12.984;QD=97.76;ReadPosRankSum=4.043;VQSLOD=4.1068;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,102,8134	1/1:1,7:8:24.08:1238,24,0	0/0:21,0:20:57.19:0,57,3500	0/0:29,0:29:74.83:0,75,3463	0/0:41,0:41:99:0,114,9017	1/1:2,18:20:48.16:2476,48,0	1/1:8,5:13:12.04:619,12,0	0/0:43,0:43:99:0,126,9420	1/1:4,9:13:14.63:773,15,0	0/0:31,0:31:93.31:0,93,7519	0/0:23,0:23:63.20:0,63,5112	0/0:23,0:23:60.20:0,60,4791	0/0:22,0:22:66.23:0,66,5374	0/0:23,0:23:69.24:0,69,5335	0/0:27,0:27:75.24:0,75,6095	0/0:19,0:19:51.17:0,51,3986	1/1:3,12:15:27.09:1292,27,0	0/0:18,0:18:54.17:0,54,4279	1/1:4,12:16:36.07:1569,36,0	1/1:7,14:21:42.14:2086,42,0	0/0:24,0:24:69.24:0,69,5481	0/0:25,0:25:72.24:0,72,5625	0/0:18,0:18:54.19:0,54,4526	0/0:25,0:25:75.20:0,75,5970	1/1:3,16:19:42.14:2167,42,0	0/0:28,0:28:84.29:0,84,7154	0/0:29,0:28:87.28:0,87,6629	0/0:18,0:18:51.14:0,51,3695
chr10	7788453	.	A	ATCCTGACTCGGGC	70692.74	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-6.035;DP=604;FS=1.299;HRun=0;HaplotypeScore=173.0116;InbreedingCoeff=0.9763;MQ=75.37;MQ0=0;MQRankSum=-10.413;QD=126.24;ReadPosRankSum=5.909;VQSLOD=5.1869;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,10:36:48.16:2730,48,0	1/1:3,4:9:14.89:952,15,0	0/0:24,0:24:65.87:0,66,1982	0/0:20,0:20:51.18:0,51,1890	1/1:1,16:21:45.15:2928,45,0	1/1:7,5:23:36.12:2184,36,0	1/1:10,6:23:36.12:2245,36,0	1/1:13,4:37:99:4224,105,0	1/1:6,8:16:33.11:2138,33,0	1/1:10,15:29:84.24:4908,84,0	1/1:5,11:21:39.13:2542,39,0	1/1:3,8:15:33.11:2198,33,0	1/1:5,11:21:48.16:2878,48,0	1/1:9,13:23:66.23:3765,66,0	1/1:7,14:23:62.82:4022,63,0	1/1:8,12:23:57.20:3628,57,0	1/1:7,3:16:30.10:1710,30,0	1/1:6,3:12:21.07:1239,21,0	1/1:7,8:21:60.19:3067,60,0	1/1:9,8:27:45.15:2980,45,0	1/1:7,1:15:15.05:781,15,0	1/1:12,7:28:51.09:2860,51,0	1/1:5,9:19:33.11:2159,33,0	1/1:7,6:20:27.09:1774,27,0	1/1:7,10:23:54.18:3376,54,0	1/1:10,13:27:67.82:4436,68,0	1/1:6,14:24:57.20:3766,57,0	1/1:1,5:8:18.06:1201,18,0
chr10	7788656	.	TAC	T	4348.23	PASS	AB=0.750;AC=46;AF=0.885;AN=52;BaseQRankSum=-1.820;DP=646;FS=6.799;HRun=0;HaplotypeScore=109.7441;InbreedingCoeff=0.1820;MQ=57.36;MQ0=13;MQRankSum=2.546;QD=7.70;ReadPosRankSum=-0.229;VQSLOD=3.6524;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:41:24.49:0,24,245	1/1:6,5:12:17.88:180,18,0	./.	./.	1/1:9,2:11:2.87:33,3,0	1/1:9,11:19:20.89:210,21,0	1/1:20,8:28:29.75:293,30,0	0/1:28,0:27:12.50:85,0,13	1/1:10,12:23:26.90:278,27,0	1/1:11,0:23:27.09:127,27,0	1/1:10,0:17:14.14:70,14,0	1/1:13,0:18:17.21:103,17,0	1/1:7,0:16:17.08:85,17,0	1/1:8,0:24:34.15:170,34,0	1/1:12,14:26:32.30:338,32,0	0/1:10,16:30:3.71:313,0,4	1/1:18,13:33:10.53:399,11,0	1/1:9,1:26:4.28:171,4,0	1/1:9,3:12:9.02:98,9,0	0/1:17,11:27:30.14:118,0,30	1/1:16,18:33:17.88:178,18,0	1/1:10,0:17:14.20:70,14,0	1/1:7,0:17:19.72:98,20,0	1/1:24,0:44:42.61:210,43,0	1/1:7,8:15:17.88:180,18,0	0/1:16,12:30:44.92:349,0,45	1/1:9,8:17:14.87:147,15,0	1/1:6,2:9:5.85:47,6,0
chr10	7791328	.	CAG	C	1369.17	PASS	AB=0.960;AC=25;AF=0.481;AN=52;BaseQRankSum=-0.328;DP=557;FS=5.198;HRun=0;HaplotypeScore=169.6843;InbreedingCoeff=0.3742;MQ=37.60;MQ0=38;MQRankSum=-0.086;QD=4.14;ReadPosRankSum=-0.932;VQSLOD=2.7514;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:26:42.57:0,43,697	0/0:12,0:12:2.92:0,3,47	./.	./.	0/1:17,1:17:0:0,0,0	0/0:39,0:35:26.58:0,27,270	0/0:21,0:17:9.03:0,9,139	0/1:27,1:15:18.33:18,0,187	0/0:13,0:13:11.52:0,12,183	0/1:33,1:29:99:135,0,202	0/1:13,1:14:0:0,0,0	1/1:13,0:12:6.60:81,7,0	1/1:18,1:19:7.57:74,8,0	1/1:19,2:20:9.05:143,9,0	1/1:18,2:20:8.69:94,9,0	0/1:22,1:21:68.75:93,0,69	0/0:19,0:18:11.80:0,12,91	0/1:19,0:17:70.55:71,0,114	0/0:21,0:14:16.19:0,16,120	0/0:24,0:22:9.84:0,10,121	1/1:22,0:14:7.23:65,7,0	1/1:14,2:16:6.02:78,6,0	0/0:20,2:22:0:0,0,0	1/1:13,0:10:9:99,9,0	0/0:22,1:20:5.58:0,6,36	0/1:31,2:28:99:212,0,141	1/1:18,3:19:24.98:263,25,0	1/1:17,0:13:6.39:112,6,0
chr10	7791336	.	G	GAC	967.46	PASS	AB=0.961;AC=18;AF=0.346;AN=52;BaseQRankSum=-3.150;DP=533;FS=4.741;HRun=0;HaplotypeScore=174.2888;InbreedingCoeff=-0.0956;MQ=36.17;MQ0=46;MQRankSum=3.228;QD=3.25;ReadPosRankSum=-2.392;VQSLOD=2.3723;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:29:54.54:0,55,728	0/0:10,0:10:8.84:0,9,106	./.	./.	0/0:17,0:16:2.99:0,3,24	0/0:40,0:35:38.42:0,38,524	0/0:19,0:15:11.15:0,11,140	0/0:27,0:11:14.05:0,14,364	0/0:13,0:13:27.06:0,27,364	0/1:31,1:27:99:120,0,620	0/1:13,0:14:0:0,0,0	0/1:13,0:12:15.52:16,0,25	0/1:19,0:19:28.89:68,0,29	0/1:21,1:22:69.71:172,0,70	0/1:18,1:19:13.21:71,0,13	0/1:22,1:21:94.12:94,0,121	0/0:15,0:14:27.80:0,28,333	0/1:18,1:17:27.93:28,0,147	0/0:17,0:10:29.55:0,30,391	0/0:24,0:22:14.73:0,15,216	1/1:22,1:14:3.06:67,3,0	1/1:16,0:16:5.68:28,6,0	1/1:15,1:16:3.01:33,3,0	0/1:12,0:9:13.39:63,0,13	0/0:18,0:15:5.76:0,6,70	0/1:29,0:24:46.08:46,0,568	0/1:18,4:20:99:269,0,120	0/1:18,0:14:43.66:44,0,232
chr10	7791340	.	CAG	C	4103.69	PASS	AB=0.712;AC=42;AF=0.808;AN=52;BaseQRankSum=-0.273;DP=520;FS=8.949;HRun=0;HaplotypeScore=161.7033;InbreedingCoeff=-0.0432;MQ=35.72;MQ0=45;MQRankSum=0.166;QD=8.46;ReadPosRankSum=-3.548;VQSLOD=2.0046;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:29:33.54:0,34,557	1/1:2,8:10:5.86:76,6,0	./.	./.	1/1:5,13:17:6:62,6,0	1/1:18,22:35:26.75:332,27,0	1/1:10,7:13:2.28:38,2,0	0/1:21,9:14:53.72:215,0,54	1/1:9,4:13:17.97:203,18,0	0/1:13,14:23:99:527,0,138	0/1:3,10:13:0:0,0,0	1/1:5,8:12:8.74:91,9,0	1/1:4,15:19:12.03:142,12,0	1/1:10,12:21:17.33:186,17,0	1/1:5,14:19:5.64:57,6,0	0/1:7,13:18:69.25:69,0,69	0/1:9,6:14:19.41:200,0,19	0/1:19,1:18:99:136,0,151	0/1:11,6:11:7.36:297,0,7	1/1:7,17:22:8.86:112,9,0	1/1:19,5:15:4.09:60,4,0	1/1:3,14:17:3.01:38,3,0	1/1:3,11:14:2.57:35,3,0	1/1:9,3:9:6:63,6,0	1/1:4,12:14:3.59:41,4,0	0/1:16,13:24:98.74:505,0,99	1/1:11,8:17:26.89:283,27,0	1/1:12,5:13:27.08:334,27,0
chr10	7791392	.	CAG	C	9196.92	PASS	AB=1.000;AC=53;AF=0.946;AN=56;BaseQRankSum=-0.968;DP=659;FS=2.698;HRun=0;HaplotypeScore=176.1310;InbreedingCoeff=0.2983;MQ=62.77;MQ0=26;MQRankSum=-1.262;QD=15.30;ReadPosRankSum=6.640;VQSLOD=4.4772;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,23:28:35.98:453,36,0	1/1:2,7:9:18.06:227,18,0	0/0:57,1:19:1.06:0,1,385	0/1:76,0:28:28.05:28,0,200	1/1:5,23:28:15.05:188,15,0	1/1:11,25:33:50.85:643,51,0	1/1:4,11:14:15.03:189,15,0	1/1:18,18:29:19.77:635,20,0	1/1:2,11:13:18.06:227,18,0	1/1:6,16:22:48.15:601,48,0	1/1:1,17:18:27.09:341,27,0	1/1:2,10:11:18.06:227,18,0	1/1:6,14:20:18.06:227,18,0	1/1:4,19:23:29.77:365,30,0	1/1:4,18:22:5.71:75,6,0	1/1:7,16:21:20.75:260,21,0	1/1:5,11:15:18.05:227,18,0	1/1:8,12:19:16.17:382,16,0	1/1:3,19:20:56.75:676,57,0	1/1:5,19:24:35.96:449,36,0	1/1:11,10:16:24.08:303,24,0	1/1:4,10:14:18.06:227,18,0	1/1:1,15:16:20.62:265,21,0	1/1:4,6:8:6.02:76,6,0	1/1:6,6:11:8.48:113,8,0	1/1:5,21:26:63.19:781,63,0	1/1:3,15:16:39.12:489,39,0	1/1:3,17:20:42.13:523,42,0
chr10	7791426	.	GA	G	2393.78	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=3.589;DP=584;FS=8.226;HRun=7;HaplotypeScore=150.2389;InbreedingCoeff=0.9831;MQ=80.56;MQ0=1;MQRankSum=-7.542;QD=23.70;ReadPosRankSum=-3.641;VQSLOD=1.2435;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:33:60.19:0,60,747	0/0:10,0:10:24.08:0,24,302	0/0:29,0:22:39.17:0,39,479	0/0:31,0:25:21.28:0,21,373	1/1:1,28:29:75.12:737,75,0	0/0:27,0:27:66.20:0,66,817	0/0:13,0:13:15.05:0,15,188	1/1:5,32:37:96.19:971,96,0	0/0:22,0:22:51.15:0,51,627	0/0:25,0:25:66.19:0,66,793	0/0:23,0:23:57.17:0,57,706	0/0:16,0:16:42.13:0,42,528	0/0:23,0:23:48.03:0,48,581	0/0:23,0:23:54.12:0,54,648	1/1:3,16:19:45.09:452,45,0	1/1:1,15:16:39.08:394,39,0	0/0:20,0:20:48.13:0,48,577	0/0:17,0:17:48.14:0,48,590	0/0:23,0:23:63.19:0,63,781	0/0:26,0:26:69.15:0,69,864	0/0:14,0:13:36.12:0,36,452	0/0:9,0:9:21.05:0,21,264	0/0:15,0:15:36.11:0,36,448	0/0:7,0:7:12.03:0,12,138	0/0:8,0:8:21.07:0,21,264	0/0:25,0:25:63.20:0,63,793	0/0:22,0:22:57.17:0,57,695	0/0:21,0:21:51.16:0,51,641
chr10	7792614	.	AGT	A	23237.73	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=4.093;DP=672;FS=3.253;HRun=0;HaplotypeScore=85.8025;InbreedingCoeff=0.9994;MQ=60.70;MQ0=10;MQRankSum=3.187;QD=38.60;ReadPosRankSum=1.923;VQSLOD=6.8033;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:84.29:0,84,1573	1/1:1,14:14:36.12:530,36,0	0/0:16,0:12:27.09:0,27,506	0/0:24,0:21:47.75:0,48,817	1/1:2,26:28:72.24:1053,72,0	1/1:0,16:15:42.14:619,42,0	1/1:1,28:29:81.27:1193,81,0	1/1:4,32:35:99:1438,99,0	1/1:1,24:25:69.23:1016,69,0	1/1:1,27:28:81.23:1150,81,0	1/1:0,18:18:48.16:707,48,0	1/1:0,18:18:54.18:795,54,0	1/1:1,23:24:63.21:928,63,0	1/1:0,30:29:81.27:1193,81,0	1/1:1,22:23:66.22:972,66,0	1/1:0,37:36:96.32:1414,96,0	1/1:0,34:33:96.32:1414,96,0	1/1:0,14:14:39.13:574,39,0	1/1:3,16:18:42.61:620,43,0	1/1:4,14:18:39.10:551,39,0	1/1:3,35:38:87.29:1281,87,0	1/1:1,21:22:60.20:883,60,0	1/1:1,22:22:57.19:840,57,0	1/1:0,15:15:36.12:530,36,0	1/1:0,23:23:57.19:840,57,0	1/1:1,33:34:99:1437,99,0	1/1:0,20:20:54.16:773,54,0	1/1:2,13:13:33.11:486,33,0
chr10	7793208	.	TACTGAAAGTACAG	T	12411.04	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=15.555;DP=642;FS=4.140;HRun=0;HaplotypeScore=237.4996;InbreedingCoeff=0.9758;MQ=71.44;MQ0=0;MQRankSum=-14.765;QD=87.40;ReadPosRankSum=2.305;VQSLOD=4.5951;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,114,7123	1/1:1,4:5:12.04:479,12,0	0/0:12,0:12:30.57:0,31,1412	0/0:13,0:14:33.06:0,33,1686	0/0:34,0:34:99:0,102,6298	1/1:4,22:26:60.21:2396,60,0	1/1:4,14:18:33.11:1313,33,0	0/0:34,0:34:84.29:0,84,5001	1/1:1,16:17:45.15:1797,45,0	0/0:32,0:32:96.33:0,96,5908	0/0:19,0:19:48.16:0,48,3007	0/0:30,0:30:87.30:0,87,5202	0/0:30,0:30:87.30:0,87,5198	0/0:22,0:22:66.21:0,66,3622	0/0:30,0:30:90.31:0,90,5559	0/0:28,0:28:84.29:0,84,5440	1/1:4,9:13:18.06:711,18,0	0/0:20,0:20:60.21:0,60,3443	1/1:6,9:15:27.07:982,27,0	1/1:3,20:23:60.17:2248,60,0	0/0:25,0:25:72.23:0,72,4307	0/0:20,0:20:54.19:0,54,3397	0/0:25,0:25:54.18:0,54,3466	0/0:15,0:15:45.15:0,45,2823	1/1:4,21:25:63.22:2485,63,0	0/0:29,0:29:87.30:0,87,5223	0/0:41,0:41:99:0,117,7251	0/0:2,0:2:6.02:0,6,372
chr10	7793950	.	CT	C	2083.95	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.132;DP=829;FS=1.755;HRun=1;HaplotypeScore=93.8277;InbreedingCoeff=0.9970;MQ=85.21;MQ0=0;MQRankSum=-4.693;QD=34.16;ReadPosRankSum=0.651;VQSLOD=3.4978;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,61:61:99:2179,157,0	0/0:9,0:9:27.09:0,27,432	0/0:33,0:33:93.04:0,93,1417	0/0:24,0:24:69.23:0,69,1066	0/0:26,0:26:69.24:0,69,1098	0/0:22,0:22:66.22:0,66,1052	0/0:35,0:35:99:0,105,1648	0/0:30,0:29:87.27:0,87,1308	0/0:22,0:22:66.22:0,66,1044	0/0:34,0:34:99:0,99,1544	0/0:19,0:19:54.17:0,54,838	0/0:38,0:38:99:0,111,1729	0/0:28,0:28:84.23:0,84,1266	0/0:37,0:37:99:0,108,1699	0/0:33,0:33:99:0,99,1553	0/0:35,0:35:99:0,105,1675	0/0:42,0:42:99:0,126,1964	0/0:25,0:25:75.26:0,75,1198	0/0:23,0:23:69.22:0,69,1060	0/0:22,0:22:60.20:0,60,959	0/0:56,0:56:99:0,169,2654	0/0:24,0:24:69.22:0,69,1080	0/0:21,0:21:63.21:0,63,1003	0/0:44,0:44:99:0,132,2109	0/0:27,0:27:78.27:0,78,1239	0/0:30,0:30:87.30:0,87,1388	0/0:21,0:21:60.20:0,60,959	0/0:8,0:8:24.08:0,24,384
chr10	7794325	.	AACACACACACAC	A	1747.79	PASS	AB=0.900;AC=15;AF=0.278;AN=54;BaseQRankSum=4.578;DP=375;FS=15.201;HRun=0;HaplotypeScore=116.8357;InbreedingCoeff=0.7037;MQ=56.93;MQ0=7;MQRankSum=-6.099;QD=16.65;ReadPosRankSum=1.567;VQSLOD=1.1647;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:22:7.84:0,8,311	1/1:3,2:5:3.01:103,3,0	./.	0/0:18,0:5:5.98:0,6,62	0/0:9,0:16:24.02:0,24,881	1/1:8,6:14:12.04:413,12,0	1/1:4,3:7:3.01:103,3,0	0/0:30,0:29:24.06:0,24,757	1/1:6,3:10:6.02:147,6,0	0/0:10,0:11:24.08:0,24,836	0/0:14,0:20:33.11:0,33,1140	0/0:3,0:5:12.01:0,12,282	0/0:5,0:5:9.03:0,9,404	0/0:6,0:7:12.04:0,12,447	0/0:6,0:8:3.01:0,3,116	0/0:11,0:13:18.06:0,18,942	1/1:5,9:14:8.87:224,9,0	0/0:11,0:15:23.07:0,23,806	0/1:16,2:18:8.22:196,0,8	1/1:3,10:13:8.70:309,9,0	0/0:9,0:9:9.03:0,9,515	0/0:3,0:8:15.05:0,15,504	0/0:5,0:12:21.01:0,21,691	0/0:5,0:10:15.05:0,15,573	1/1:13,11:24:18.06:423,18,0	0/0:20,0:20:30.09:0,30,1348	0/0:7,0:8:21.07:0,21,1041	0/0:10,0:11:12.04:0,12,565
chr10	7795605	.	T	TA	23770.82	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-10.395;DP=736;FS=0.564;HRun=4;HaplotypeScore=71.0494;InbreedingCoeff=0.9937;MQ=88.95;MQ0=0;MQRankSum=-11.303;QD=34.91;ReadPosRankSum=4.855;VQSLOD=5.0324;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,29:32:69.23:944,69,0	1/1:0,9:9:18.06:246,18,0	0/0:25,0:26:68.19:0,68,726	0/0:29,0:29:69.07:0,69,716	1/1:3,20:23:60.20:821,60,0	1/1:1,24:25:72.24:985,72,0	1/1:3,30:33:81.23:1087,81,0	1/1:4,36:40:99:1393,105,0	1/1:1,21:22:63.20:847,63,0	1/1:7,38:45:99:1544,114,0	1/1:3,20:23:54.18:738,54,0	1/1:2,19:21:54.18:739,54,0	1/1:1,30:31:84.28:1149,84,0	1/1:2,23:25:63.21:862,63,0	1/1:2,37:39:99:1436,105,0	1/1:4,38:42:99:1354,99,0	1/1:2,21:23:51.17:697,51,0	1/1:1,13:14:36.12:492,36,0	1/1:1,27:28:78.68:1015,79,0	1/1:0,25:25:69.19:923,69,0	1/1:1,24:25:60.20:813,60,0	1/1:1,28:29:72.24:985,72,0	1/1:2,23:25:66.22:902,66,0	1/1:1,23:24:66.22:903,66,0	1/1:0,21:21:60.20:820,60,0	1/1:0,23:23:66.21:887,66,0	1/1:3,23:26:66.22:903,66,0	1/1:0,7:7:21.07:287,21,0
chr10	7795939	.	GCATCATCATCATCATCATCATCAT	G	2529.95	PASS	AB=0.938;AC=28;AF=0.538;AN=52;BaseQRankSum=2.943;DP=608;FS=12.099;HRun=0;HaplotypeScore=325.4326;InbreedingCoeff=0.2948;MQ=74.75;MQ0=8;MQRankSum=0.192;QD=7.49;ReadPosRankSum=-0.627;VQSLOD=0.6887;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:21:9.03:0,9,119	0/0:1,0:5:6.02:0,6,72	0/0:36,0:30:3:0,3,27	0/0:28,0:24:5.51:0,6,51	1/1:8,5:13:2.92:17,3,0	0/1:13,0:13:43.06:43,0,228	0/1:31,0:31:53.13:53,0,129	1/1:19,9:28:3.77:285,4,0	0/0:19,0:27:12.02:0,12,170	1/1:18,3:21:5.79:101,6,0	./.	1/1:21,13:34:2.49:9,2,0	1/1:7,13:19:6.02:217,6,0	1/1:20,13:32:5.93:159,6,0	1/1:13,19:32:5.93:120,6,0	1/1:8,11:18:5.89:37,6,0	1/1:7,0:11:5.75:92,6,0	0/1:18,0:18:99:363,0,148	0/1:10,0:13:60.35:86,0,60	0/0:9,0:14:9.02:0,9,113	0/0:31,17:47:0.89:0,1,2	0/0:8,7:15:0.47:0,0,1	0/0:6,5:11:0:0,0,0	./.	0/0:7,0:10:3.01:0,3,36	1/1:12,7:19:18.04:397,18,0	1/1:16,10:26:9.03:521,9,0	1/1:1,4:5:3.01:183,3,0
chr10	7796035	.	GCAC	G	5942.60	PASS	AB=1.000;AC=33;AF=0.589;AN=56;BaseQRankSum=-3.114;DP=516;FS=1.082;HRun=0;HaplotypeScore=129.4269;InbreedingCoeff=0.7132;MQ=49.96;MQ0=20;MQRankSum=1.996;QD=16.28;ReadPosRankSum=3.453;VQSLOD=4.3279;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:7:9.37:0,9,63	0/0:5,0:5:8.99:0,9,75	0/1:4,0:3:15.95:16,0,18	0/0:8,0:6:0.45:0,0,41	1/1:5,0:5:5.59:34,6,0	0/0:11,0:8:14.89:0,15,112	0/0:37,0:35:45.90:0,46,404	1/1:13,8:15:20.82:162,21,0	0/0:32,0:32:60.85:0,61,550	1/1:2,6:8:17.96:160,18,0	1/1:3,0:3:2.58:24,3,0	1/1:42,1:42:86.02:843,86,0	1/1:30,0:30:55.96:523,56,0	1/1:41,0:40:73.62:801,74,0	1/1:32,1:32:71.55:698,72,0	1/1:23,1:24:41.99:460,42,0	0/0:18,0:17:25.21:0,25,203	1/1:25,0:25:31.39:580,31,0	0/0:12,0:9:9:0,9,78	0/0:1,0:1:2.99:0,3,24	1/1:46,0:41:50.77:461,51,0	1/1:4,0:4:1.89:18,2,0	0/0:3,0:3:0.47:0,0,1	1/1:46,0:46:59.21:565,59,0	0/0:13,0:11:16.35:0,16,119	1/1:5,1:3:2.68:26,3,0	1/1:18,1:19:41.98:433,42,0	1/1:7,0:6:14.89:138,15,0
chr10	7798132	.	T	TAC	4150.44	PASS	AB=0.861;AC=32;AF=0.571;AN=56;BaseQRankSum=2.341;DP=703;FS=1.120;HRun=0;HaplotypeScore=175.2349;InbreedingCoeff=0.1407;MQ=53.68;MQ0=13;MQRankSum=-1.421;QD=8.09;ReadPosRankSum=-0.545;VQSLOD=3.4422;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:13.87:0,14,414	0/0:10,0:10:2.49:0,2,10	0/1:38,0:21:6.98:7,0,218	0/0:49,0:28:38.86:0,39,381	1/1:7,9:16:2.97:49,3,0	0/0:23,0:22:5.22:0,5,260	0/1:31,0:31:14.13:14,0,32	1/1:37,0:36:19.27:628,19,0	0/1:17,0:17:19.28:19,0,28	1/1:17,5:21:46.39:630,46,0	0/1:15,3:17:14.64:188,0,15	1/1:18,6:24:6.41:52,6,0	0/1:10,21:31:20.71:76,0,21	1/1:11,12:22:3.01:34,3,0	0/0:13,11:24:5.14:0,5,21	1/1:30,4:32:16.17:502,16,0	0/1:15,0:15:71.98:72,0,100	1/1:15,1:15:14.29:209,14,0	0/0:26,0:25:43.60:0,44,426	0/0:17,0:16:2.22:0,2,7	0/1:18,26:46:27.57:31,0,28	0/1:16,2:18:5.35:63,0,5	1/1:17,0:16:23.82:291,24,0	1/1:36,0:35:27.08:389,27,0	0/1:23,0:23:11.50:11,0,18	0/1:13,13:26:16.46:559,0,16	1/1:3,9:12:6:61,6,0	1/1:1,11:12:18.06:265,18,0
chr10	7798139	.	A	ACACACACACATACG	5233.84	PASS	AB=0.982;AC=31;AF=0.554;AN=56;BaseQRankSum=1.586;DP=714;FS=0.474;HRun=0;HaplotypeScore=269.3849;InbreedingCoeff=-0.4111;MQ=51.84;MQ0=13;MQRankSum=-1.408;QD=8.44;ReadPosRankSum=5.002;VQSLOD=3.0633;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:39.15:0,39,428	0/0:10,0:10:2.58:0,3,74	0/1:32,0:16:7:7,0,391	0/0:44,0:24:35.84:0,36,716	0/1:19,0:19:18.63:39,0,19	0/1:25,0:24:24.56:25,0,273	0/1:39,0:39:37.39:37,0,41	0/1:33,0:32:43.22:690,0,43	0/1:16,0:16:30.49:34,0,30	1/1:24,0:23:51.97:795,52,0	0/1:19,0:18:14.37:169,0,14	0/1:14,10:29:35.39:35,0,51	0/1:32,0:32:32.97:308,0,33	0/1:21,0:20:24.56:25,0,42	0/1:27,0:27:22.31:242,0,22	0/1:33,0:31:31.99:538,0,32	0/1:16,0:16:66.75:67,0,202	0/1:20,0:18:99:291,0,126	0/1:25,0:24:5.62:6,0,453	1/1:20,0:19:3.24:43,3,0	0/1:47,0:47:8.33:8,0,87	0/1:17,0:16:5.57:51,0,6	1/1:16,0:15:23.72:335,24,0	1/1:39,0:38:6:372,6,0	0/1:22,0:22:30.64:31,0,41	0/1:22,0:22:47.67:781,0,48	1/1:13,0:13:5.95:77,6,0	1/1:14,0:14:2.50:229,3,0
chr10	7798146	.	CAT	C	2655.24	PASS	AB=0.948;AC=33;AF=0.589;AN=56;BaseQRankSum=0.265;DP=701;FS=20.504;HRun=0;HaplotypeScore=173.1513;InbreedingCoeff=-0.0652;MQ=49.90;MQ0=13;MQRankSum=2.457;QD=4.61;ReadPosRankSum=-3.434;VQSLOD=1.1964;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:36,1:37:29.87:30,0,251	0/1:12,0:12:20.15:40,0,20	0/0:26,0:10:12.51:0,13,181	0/0:41,0:19:19.14:0,19,213	0/1:19,0:19:7.41:39,0,7	0/1:26,0:25:25.42:25,0,221	0/1:37,0:37:45.41:112,0,45	0/1:10,23:32:11.28:384,0,11	0/0:16,0:16:6.38:0,6,41	0/1:20,3:22:28.18:215,0,28	0/1:18,1:18:1.55:92,0,2	1/1:27,1:28:0.29:35,0,0	1/1:31,1:32:3.62:150,4,0	1/1:21,1:21:9.19:59,9,0	1/1:23,3:26:17.30:166,17,0	1/1:29,3:30:3.09:225,3,0	0/1:17,0:17:25.67:26,0,85	1/1:17,3:18:23.84:290,24,0	0/0:23,0:22:43.77:0,44,447	0/0:17,0:16:2.83:0,3,27	0/1:46,1:47:12.08:56,0,12	1/1:15,1:15:7.49:52,7,0	1/1:14,2:15:17.76:149,18,0	1/1:35,4:38:36.07:256,36,0	0/1:22,0:22:14.43:14,0,39	0/1:25,0:25:27.48:282,0,27	1/1:12,0:12:1.84:38,2,0	0/1:15,1:16:7.74:87,0,8
chr10	7798148	.	T	TACGCACAC	3720.25	PASS	AB=0.945;AC=33;AF=0.589;AN=56;BaseQRankSum=0.501;DP=687;FS=11.729;HRun=0;HaplotypeScore=210.8275;InbreedingCoeff=-0.2003;MQ=48.89;MQ0=14;MQRankSum=0.103;QD=6.20;ReadPosRankSum=3.919;VQSLOD=1.3441;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:36,0:35:18.99:219,0,19	1/1:12,0:12:3.84:52,4,0	0/0:25,0:9:18.48:0,18,169	0/0:42,0:18:25.78:0,26,285	0/1:17,0:17:16.20:35,0,16	1/1:24,0:23:32.57:405,33,0	1/1:37,0:37:11.62:402,12,0	0/1:33,0:32:2.07:270,0,2	0/1:3,14:21:9.92:127,0,10	1/1:23,0:22:1.70:260,2,0	1/1:19,0:18:2.97:38,3,0	0/1:28,0:28:0.40:0,0,28	0/1:30,0:30:25.46:114,0,25	0/0:20,0:19:4.70:0,5,16	0/1:21,0:21:57.37:70,0,57	0/1:28,0:26:18.47:118,0,18	1/1:17,0:17:1.16:365,1,0	0/1:20,0:18:99:127,0,131	1/1:26,0:25:15.31:197,15,0	0/1:17,0:16:0.67:98,0,1	0/1:48,0:48:9.75:37,0,10	0/1:16,0:15:9.94:17,0,10	1/1:12,0:11:5.75:125,6,0	0/1:37,0:36:1.21:172,0,1	0/1:2,14:23:2.64:127,0,3	0/1:26,0:25:2.07:252,0,2	0/1:13,0:13:24.20:49,0,24	0/1:16,0:16:18.57:45,0,19
chr10	7798149	.	A	ACG	1511.81	PASS	AB=0.954;AC=26;AF=0.464;AN=56;BaseQRankSum=1.093;DP=686;FS=21.413;HRun=0;HaplotypeScore=177.5473;InbreedingCoeff=-0.4624;MQ=48.45;MQ0=16;MQRankSum=1.462;QD=2.75;ReadPosRankSum=6.663;VQSLOD=0.5762;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:37,0:36:43.74:195,0,44	0/1:2,10:12:37.54:49,0,38	0/0:24,0:8:18.48:0,18,169	0/0:43,0:17:26.78:0,27,286	0/1:17,0:17:11.16:11,0,41	1/1:24,0:23:4.99:176,5,0	0/1:16,21:37:20.87:21,0,125	0/1:36,0:35:86.60:178,0,87	0/1:23,0:23:13.97:30,0,14	0/1:21,0:21:59.78:143,0,60	0/1:16,0:16:18.46:32,0,18	0/0:27,0:27:3.70:0,4,33	0/1:31,0:31:3.81:4,0,101	0/0:20,0:19:9.77:0,10,63	0/0:22,0:22:18.36:0,18,137	0/1:28,0:26:41.97:115,0,42	0/1:18,0:18:39.09:83,0,39	0/1:20,0:18:13.17:13,0,171	1/1:25,0:24:12.60:154,13,0	1/1:7,10:16:2.80:54,3,0	0/1:47,0:47:12.61:13,0,40	0/1:16,0:15:14.04:14,0,29	0/1:12,0:11:15.52:116,0,16	0/1:37,0:36:47.01:95,0,47	0/1:19,0:19:15.13:39,0,15	0/1:25,0:24:90.31:90,0,127	0/1:14,0:14:6.93:7,0,47	0/1:16,0:16:37.75:38,0,64
chr10	7798150	.	C	CGCACACAC	3781	PASS	AB=0.998;AC=33;AF=0.589;AN=56;BaseQRankSum=0.566;DP=688;FS=13.076;HRun=0;HaplotypeScore=210.5254;InbreedingCoeff=-0.2357;MQ=47.19;MQ0=17;MQRankSum=0.988;QD=6.29;ReadPosRankSum=3.731;VQSLOD=1.5998;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:38,0:37:19.46:219,0,19	1/1:15,0:15:3.84:52,4,0	0/0:24,0:8:18.40:0,18,169	0/0:43,0:16:28.95:0,29,290	0/1:18,0:18:16.20:35,0,16	1/1:15,4:23:32.57:405,33,0	1/1:36,0:36:11.62:402,12,0	0/1:35,0:34:1.18:271,0,1	0/1:22,0:22:9.92:127,0,10	1/1:21,0:20:1.77:260,2,0	1/1:16,0:16:3.02:38,3,0	0/1:26,0:27:25.06:38,0,25	0/1:31,0:31:25.72:114,0,26	0/0:19,0:19:4.70:0,5,16	0/1:22,0:22:57.37:70,0,57	0/1:26,0:24:18.45:118,0,18	1/1:17,0:17:1.16:365,1,0	0/1:20,0:18:99:127,0,131	1/1:25,0:23:18.74:217,19,0	0/1:17,0:16:0.67:98,0,1	0/1:49,0:49:9.09:37,0,9	0/1:17,0:16:9.94:17,0,10	1/1:12,0:11:5.75:125,6,0	0/1:38,0:37:1.21:172,0,1	0/1:19,0:19:2.64:127,0,3	0/1:25,0:24:0.78:253,0,1	0/1:14,0:14:24.20:49,0,24	0/1:16,0:16:18.57:45,0,19
chr10	7798708	.	TAA	T	13609.42	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-4.634;DP=615;FS=5.782;HRun=12;HaplotypeScore=126.0731;InbreedingCoeff=0.9613;MQ=72.85;MQ0=1;MQRankSum=-5.850;QD=23.34;ReadPosRankSum=3.817;VQSLOD=3.9517;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,28:35:71.88:785,72,0	1/1:1,6:7:18.04:182,18,0	0/0:20,0:18:11.03:0,11,310	0/0:12,0:11:17.80:0,18,192	1/1:3,20:23:26.02:463,26,0	1/1:6,11:17:30.04:304,30,0	1/1:2,20:22:54.99:603,55,0	1/1:2,17:19:48.06:481,48,0	1/1:3,24:28:47.83:540,48,0	1/1:2,19:21:57.09:572,57,0	1/1:3,24:27:72.14:732,72,0	1/1:0,17:17:42.04:427,42,0	1/1:1,22:24:56.86:561,57,0	1/1:3,23:26:63.12:641,63,0	1/1:3,26:29:69.14:701,69,0	1/1:6,21:27:56.83:561,57,0	1/1:4,28:33:86.89:866,87,0	1/1:1,13:14:36.08:366,36,0	1/1:4,15:19:45.05:457,45,0	1/1:1,18:19:51.09:518,51,0	1/1:5,17:22:44.63:456,45,0	1/1:4,26:30:72.11:732,72,0	1/1:4,11:17:26.50:308,26,0	1/1:9,23:32:63.03:641,63,0	1/1:6,21:27:60.10:610,60,0	1/1:4,9:14:29.73:278,30,0	1/1:2,23:25:66.14:671,66,0	1/1:1,7:8:15.02:153,15,0
chr10	7799811	.	GA	G	12409.96	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=3.011;DP=559;FS=13.090;HRun=8;HaplotypeScore=114.2898;InbreedingCoeff=0.9641;MQ=80.86;MQ0=0;MQRankSum=-6.917;QD=23.68;ReadPosRankSum=3.249;VQSLOD=3.7923;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,16:19:42.06:405,42,0	1/1:0,3:3:9.01:87,9,0	0/0:26,0:26:54.11:0,54,614	0/0:9,0:9:23.66:0,24,255	1/1:4,13:17:30.03:284,30,0	1/1:3,15:18:45.07:433,45,0	1/1:0,20:20:57.09:550,57,0	1/1:4,24:28:72.11:695,72,0	1/1:4,23:27:54.08:522,54,0	1/1:3,19:22:17.83:452,18,0	1/1:2,10:12:33.04:313,33,0	1/1:1,21:22:60.10:579,60,0	1/1:5,23:28:47.35:589,47,0	1/1:3,15:18:39.06:376,39,0	1/1:4,23:27:66.11:637,66,0	1/1:1,29:30:84.14:811,84,0	1/1:2,19:21:54.09:521,54,0	1/1:6,18:24:57.04:550,57,0	1/1:1,11:12:33.05:318,33,0	1/1:3,23:26:63.08:608,63,0	1/1:1,17:18:48.08:464,48,0	1/1:2,11:13:30.04:290,30,0	1/1:1,13:14:36.06:347,36,0	1/1:1,22:23:66.10:637,66,0	1/1:1,23:24:51.08:492,51,0	1/1:3,17:20:48.05:457,48,0	1/1:1,26:28:77.15:729,77,0	1/1:0,10:10:27.04:261,27,0
chr10	7800491	.	C	CT	9755.40	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-14.962;DP=728;FS=1.842;HRun=10;HaplotypeScore=83.7704;InbreedingCoeff=0.9904;MQ=73.41;MQ0=0;MQRankSum=0.106;QD=21.87;ReadPosRankSum=0.625;VQSLOD=5.5587;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:40:85.90:0,86,693	0/0:12,0:12:35.94:0,36,292	0/0:19,0:17:29.92:0,30,242	0/0:13,0:13:16.22:0,16,126	1/1:5,23:28:70.13:683,70,0	0/0:27,0:28:70.92:0,71,572	0/0:31,0:31:80.85:0,81,662	1/1:5,26:31:69.17:729,69,0	0/0:35,0:36:94.91:0,95,769	1/1:9,25:34:50.50:723,50,0	1/1:5,17:22:45.11:480,45,0	1/1:6,19:25:48.12:512,48,0	1/1:5,13:19:47.92:483,48,0	1/1:4,18:22:57.08:582,57,0	1/1:6,29:36:81.04:846,81,0	1/1:4,30:35:81.04:846,81,0	0/0:23,0:23:53.92:0,54,443	1/1:7,18:25:45.07:468,45,0	0/0:23,0:23:38.92:0,39,320	0/0:29,0:29:65.90:0,66,542	1/1:5,20:25:41.27:474,41,0	1/1:5,30:35:78.08:795,78,0	1/1:4,18:24:27.20:469,27,0	1/1:5,19:24:45.11:480,45,0	0/0:28,0:27:65.39:0,65,541	1/1:5,21:26:59.92:594,60,0	1/1:4,22:27:47.95:494,48,0	1/1:3,4:7:9.49:97,9,0
chr10	7800988	.	CT	C	16212.05	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=14.117;DP=792;FS=1.835;HRun=3;HaplotypeScore=83.5559;InbreedingCoeff=0.9956;MQ=82.97;MQ0=0;MQRankSum=-2.755;QD=34.57;ReadPosRankSum=4.458;VQSLOD=5.3373;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,163,2332	0/0:16,0:16:45.15:0,45,648	0/0:27,0:27:33.02:0,33,738	0/0:23,0:23:60.18:0,60,817	1/1:2,31:33:84.26:1041,84,0	0/0:32,0:32:87.28:0,87,1236	0/0:30,0:30:90.26:0,90,1240	1/1:3,26:29:78.23:955,78,0	0/0:22,0:22:66.22:0,66,951	1/1:3,29:32:87.25:1064,87,0	1/1:0,23:23:69.22:855,69,0	1/1:1,29:30:87.27:1079,87,0	1/1:1,32:33:87.27:1079,87,0	1/1:2,25:27:75.23:929,75,0	1/1:2,33:35:96.30:1190,96,0	1/1:1,28:29:78.25:967,78,0	0/0:38,0:38:99:0,108,1534	1/1:1,22:23:66.21:818,66,0	0/0:25,0:25:69.22:0,69,977	0/0:32,0:32:96.32:0,96,1381	1/1:1,38:39:99:1376,111,0	1/1:0,28:28:81.25:1004,81,0	1/1:0,25:25:72.23:893,72,0	1/1:0,33:33:90.28:1116,90,0	0/0:24,0:24:72.24:0,72,1036	1/1:0,23:23:69.20:843,69,0	1/1:0,23:23:69.22:855,69,0	1/1:0,4:4:12.04:149,12,0
chr10	7804535	.	T	TACAC	7720.79	PASS	AB=0.621;AC=28;AF=0.519;AN=54;BaseQRankSum=-9.654;DP=548;FS=8.436;HRun=0;HaplotypeScore=128.5447;InbreedingCoeff=0.5201;MQ=59.63;MQ0=16;MQRankSum=6.804;QD=22.31;ReadPosRankSum=-1.588;VQSLOD=3.8358;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:24:11.78:0,12,100	0/0:2,0:10:13.57:0,14,115	0/0:26,0:14:3.01:0,3,48	./.	1/1:17,12:38:37.86:691,38,0	0/0:7,0:14:15.90:0,16,141	0/0:3,0:12:17.98:0,18,159	1/1:20,3:23:14.99:197,15,0	0/0:5,0:17:21.02:0,21,195	1/1:9,8:21:41.79:703,42,0	1/1:9,6:16:12.04:288,12,0	1/1:8,5:20:17.80:372,18,0	1/1:5,5:14:15.05:340,15,0	1/1:3,5:10:15.05:357,15,0	1/1:6,9:20:20.54:385,21,0	0/1:4,6:12:29.97:342,0,30	0/0:12,0:20:6.74:0,7,58	0/1:7,8:16:23.91:469,0,24	0/0:5,0:13:23.82:0,24,209	0/0:4,0:21:17.34:0,17,122	1/1:18,11:36:32.58:673,33,0	0/1:8,6:18:27.17:292,0,27	0/1:8,5:17:51.95:393,0,52	0/1:8,18:32:0.40:913,0,0	0/0:6,0:15:15.02:0,15,140	1/1:15,0:15:12.03:195,12,0	0/1:7,13:23:15.25:686,0,15	1/1:3,4:10:20.81:424,21,0
chr10	7805161	.	ATC	A	6533.10	PASS	AB=0.929;AC=19;AF=0.339;AN=56;BaseQRankSum=6.906;DP=748;FS=5.523;HRun=0;HaplotypeScore=134.3930;InbreedingCoeff=0.9211;MQ=84.06;MQ0=1;MQRankSum=-2.847;QD=27.22;ReadPosRankSum=1.569;VQSLOD=6.2610;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,47:51:99:1439,114,0	1/1:1,6:7:18.06:227,18,0	0/0:49,0:46:93.08:0,93,1288	0/0:35,0:31:15.80:0,16,779	0/0:21,0:21:48.16:0,48,776	1/1:3,14:17:42.13:530,42,0	1/1:3,27:30:72.23:909,72,0	0/0:29,0:29:60.21:0,60,997	1/1:6,15:21:42.13:530,42,0	0/0:31,0:31:75.26:0,75,1244	0/0:12,0:12:36.12:0,36,598	0/0:25,0:25:69.23:0,69,1127	0/0:20,0:20:57.19:0,57,947	0/0:31,0:31:81.26:0,81,1318	0/0:28,0:28:78.27:0,78,1293	0/0:40,1:41:67.49:0,67,1651	1/1:2,27:29:69.22:871,69,0	0/0:17,0:17:48.16:0,48,788	1/1:7,20:27:10.30:657,10,0	1/1:1,22:23:54.17:682,54,0	0/0:36,0:36:96.28:0,96,1519	0/0:35,0:35:93.32:0,93,1543	0/1:12,1:13:7.78:8,0,372	0/0:26,0:26:66.22:0,66,1090	1/1:1,21:22:54.05:681,54,0	0/0:22,0:22:54.18:0,54,879	0/0:29,0:29:84.29:0,84,1382	0/0:21,0:21:33.11:0,33,543
chr10	7807927	.	G	GA	15183.14	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-15.658;DP=652;FS=0.311;HRun=3;HaplotypeScore=61.6616;InbreedingCoeff=0.9993;MQ=69.39;MQ0=0;MQRankSum=-0.004;QD=36.41;ReadPosRankSum=3.470;VQSLOD=5.3600;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:75.18:0,75,863	0/0:8,0:8:24.07:0,24,288	0/0:14,0:13:24.05:0,24,278	0/0:19,0:17:39.42:0,39,431	1/1:4,34:38:90.26:1237,90,0	0/0:21,0:21:60.12:0,60,701	0/0:21,0:21:57.16:0,57,671	1/1:2,20:23:57.18:781,57,0	0/0:22,0:22:63.19:0,63,756	1/1:2,26:28:78.26:1091,78,0	1/1:1,20:21:57.15:775,57,0	1/1:1,25:26:72.24:1008,72,0	1/1:4,25:29:69.23:965,69,0	1/1:2,18:20:54.18:752,54,0	1/1:1,23:24:60.20:840,60,0	1/1:4,33:37:89.89:1228,90,0	0/0:35,0:35:93.26:0,93,1092	1/1:0,18:18:48.16:671,48,0	0/0:16,0:16:48.13:0,48,557	0/0:35,0:35:96.29:0,96,1151	1/1:0,11:11:30.10:420,30,0	1/1:2,16:18:48.16:669,48,0	1/1:2,24:26:72.24:1007,72,0	1/1:1,19:20:57.19:798,57,0	0/0:17,0:17:51.16:0,51,611	1/1:2,25:27:75.24:1033,75,0	1/1:1,31:33:84.25:1154,84,0	1/1:0,18:18:54.18:755,54,0
chr10	7808357	.	CAT	C	4508.58	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=12.375;DP=572;FS=0.385;HRun=0;HaplotypeScore=96.9645;InbreedingCoeff=0.9429;MQ=64.00;MQ0=2;MQRankSum=-0.187;QD=23.00;ReadPosRankSum=2.066;VQSLOD=5.2219;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,14:15:24.08:303,24,0	1/1:2,9:11:21.07:265,21,0	0/0:9,0:4:2.90:0,3,16	0/0:15,0:9:2.60:0,3,10	0/0:33,0:33:81.21:0,81,1223	1/1:1,28:29:63.20:795,63,0	1/1:3,13:16:21.07:265,21,0	0/0:32,0:32:78.25:0,78,1229	1/1:0,18:18:48.15:605,48,0	0/0:38,0:38:99:0,105,1634	0/0:28,0:28:75.26:0,75,1246	0/0:16,0:16:33.11:0,33,548	0/0:16,0:16:42.12:0,42,648	0/0:27,0:27:66.23:0,66,1070	0/0:17,0:17:36.04:0,36,514	0/0:18,1:19:19.33:0,19,803	1/1:1,16:17:24.08:303,24,0	0/0:13,0:13:30.10:0,30,474	1/1:7,19:24:57.10:652,57,0	1/1:5,27:32:51.16:643,51,0	0/0:7,0:7:21.07:0,21,345	0/0:11,0:11:33.11:0,33,544	0/0:16,0:16:45.14:0,45,715	0/0:12,0:12:30.10:0,30,494	1/1:5,27:32:54.17:678,54,0	0/0:29,1:30:46.40:0,46,1236	0/0:24,0:25:60.16:0,60,893	0/0:11,0:11:30.09:0,30,472
chr10	7813186	.	G	GCA	28484.83	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=1.241;DP=674;FS=0.613;HRun=0;HaplotypeScore=112.6341;InbreedingCoeff=0.9956;MQ=81.45;MQ0=1;MQRankSum=-10.427;QD=45.21;ReadPosRankSum=4.684;VQSLOD=6.0545;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,53:56:99:2626,144,0	1/1:0,8:8:21.07:385,21,0	0/0:22,0:22:60.20:0,60,840	0/0:22,0:22:57.06:0,57,759	1/1:1,17:19:45.15:818,45,0	1/1:1,18:19:54.19:988,54,0	1/1:7,27:35:72.25:1318,72,0	1/1:7,36:43:99:1840,108,0	1/1:2,17:19:42.14:769,42,0	1/1:3,23:27:69.24:1261,69,0	1/1:2,11:15:36.12:646,36,0	1/1:2,25:27:69.24:1262,69,0	1/1:2,22:25:60.21:1098,60,0	1/1:2,25:27:72.25:1317,72,0	1/1:2,33:35:96.33:1750,96,0	1/1:2,20:23:51.17:934,51,0	1/1:0,20:20:54.19:988,54,0	1/1:1,20:21:60.21:1083,60,0	1/1:2,12:14:36.10:625,36,0	1/1:0,14:14:39.13:713,39,0	1/1:2,29:30:78.27:1423,78,0	1/1:1,22:23:63.22:1142,63,0	1/1:1,13:16:39.13:707,39,0	1/1:2,31:33:76.20:1375,76,0	1/1:0,22:23:63.22:1141,63,0	1/1:3,19:23:57.17:1011,57,0	1/1:7,16:23:48.16:878,48,0	1/1:2,8:9:21.07:385,21,0
chr10	7813441	.	TTGTGTGTG	T	4853.58	PASS	AB=0.706;AC=36;AF=0.667;AN=54;BaseQRankSum=1.176;DP=700;FS=7.363;HRun=0;HaplotypeScore=192.2654;InbreedingCoeff=0.5135;MQ=60.11;MQ0=12;MQRankSum=-2.645;QD=9.93;ReadPosRankSum=1.501;VQSLOD=2.7823;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:36,9:45:7.64:111,0,8	1/1:5,8:13:9.03:228,9,0	0/0:21,0:17:11.68:0,12,98	0/0:25,0:18:6.01:0,6,66	0/0:9,0:17:10.28:0,10,191	1/1:12,11:23:9.03:228,9,0	1/1:14,13:27:7.27:119,7,0	0/0:25,0:23:14.53:0,15,101	1/1:12,14:26:21.02:486,21,0	1/1:10,13:22:27.32:380,27,0	1/1:10,5:16:3.01:56,3,0	1/1:11,23:34:20.86:452,21,0	1/1:11,26:37:19.89:687,20,0	1/1:6,23:30:7.21:190,7,0	0/0:12,0:21:18.03:0,18,308	0/0:14,0:29:25.27:0,25,415	1/1:5,23:28:12.04:248,12,0	1/1:13,1:14:9.72:197,10,0	0/1:13,5:17:3.02:161,0,3	1/1:10,13:23:12.04:268,12,0	0/0:28,27:55:2.95:0,3,25	./.	1/1:7,10:17:5.89:91,6,0	0/1:20,32:53:40.85:65,0,41	1/1:7,7:14:9.03:169,9,0	1/1:7,9:16:26.61:444,27,0	1/1:7,8:16:5.35:131,5,0	0/1:4,9:12:19.13:142,0,19
chr10	7817425	.	A	ATG	9423.82	PASS	AB=0.688;AC=48;AF=0.857;AN=56;BaseQRankSum=-1.609;DP=845;FS=0.674;HRun=0;HaplotypeScore=155.2184;InbreedingCoeff=0.3984;MQ=44.23;MQ0=25;MQRankSum=5.443;QD=12.33;ReadPosRankSum=6.563;VQSLOD=4.1889;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:34,2:37:31.02:272,31,0	1/1:6,1:19:21.01:207,21,0	0/0:36,0:17:27.05:0,27,296	0/0:45,0:24:41.95:0,42,487	1/1:10,20:28:18.36:429,18,0	1/1:16,1:24:20.47:159,20,0	1/1:11,2:27:24.01:225,24,0	0/1:29,14:38:53.62:606,0,54	0/1:8,1:29:6.41:109,0,6	1/1:25,10:32:54.18:843,54,0	0/1:14,4:18:24.83:233,0,25	1/1:9,21:28:25.10:433,25,0	1/1:5,28:32:41.91:665,42,0	1/1:7,21:26:36.12:586,36,0	1/1:20,13:27:29.77:448,30,0	1/1:11,19:27:24.08:391,24,0	1/1:14,2:30:8.68:190,9,0	1/1:16,5:16:21.35:405,21,0	1/1:15,0:22:20.18:138,20,0	1/1:5,3:36:42.05:436,42,0	1/1:18,1:15:9.01:102,9,0	1/1:7,21:27:8.48:649,8,0	1/1:13,8:20:30.10:479,30,0	0/1:13,22:31:12.91:318,0,13	1/1:7,2:31:24.01:212,24,0	1/1:10,0:29:60.14:467,60,0	1/1:4,1:22:33:291,33,0	1/1:0,0:7:15.01:133,15,0
chr10	7817479	.	GTC	G	275.69	PASS	AB=0.993;AC=22;AF=0.423;AN=52;BaseQRankSum=3.359;DP=1402;FS=0.000;HRun=0;HaplotypeScore=209.7121;InbreedingCoeff=-0.2762;MQ=22.56;MQ0=436;MQRankSum=-1.940;QD=0.29;ReadPosRankSum=0.615;VQSLOD=2.3028;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:85,0:37:4.48:21,4,0	0/1:32,1:25:3.90:43,0,4	./.	./.	0/1:38,0:29:29.43:29,0,68	0/1:46,0:28:9.23:9,0,89	0/0:71,1:21:5.67:0,6,43	0/1:62,1:19:83.33:83,0,138	0/1:53,0:22:0.19:0,0,78	0/0:50,0:29:22.18:0,22,360	1/1:15,0:10:1.25:3,1,0	0/1:54,0:23:6.25:6,0,32	0/1:51,0:27:21.22:21,0,111	0/1:40,0:24:13.39:13,0,66	0/1:60,0:30:2.39:2,0,45	0/1:41,1:27:23.27:23,0,26	0/1:80,2:35:24.65:25,0,148	0/1:59,0:24:20.55:21,0,185	0/0:31,0:9:2.06:0,2,69	0/0:56,0:43:20.75:0,21,179	0/0:178,0:40:8.96:0,9,96	0/0:37,0:24:5.28:0,5,99	1/1:25,0:14:8.09:35,8,0	0/1:74,0:32:3.95:4,0,20	0/1:51,0:31:19.51:20,0,20	0/1:45,1:28:38.11:38,0,310	0/1:39,0:18:22.71:23,0,127	0/0:22,0:10:16.50:0,17,136
chr10	7817481	.	CTG	C	793.07	PASS	AB=0.958;AC=23;AF=0.442;AN=52;BaseQRankSum=-1.822;DP=1403;FS=3.798;HRun=0;HaplotypeScore=207.5844;InbreedingCoeff=-0.0303;MQ=22.20;MQ0=433;MQRankSum=0.400;QD=1.02;ReadPosRankSum=-0.971;VQSLOD=2.6662;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:83,2:38:1.52:0,2,4	0/0:32,0:24:5.37:0,5,30	./.	./.	1/1:34,3:29:11.87:93,12,0	0/0:43,3:28:2.28:0,2,49	1/1:71,4:23:0.20:0,0,0	0/1:49,4:14:14.63:149,0,15	0/1:53,1:20:9.95:10,0,100	0/0:48,0:28:39.96:0,40,416	1/1:14,1:10:1.25:3,1,0	0/1:48,5:21:8.76:23,0,9	0/1:51,2:28:47.87:132,0,48	1/1:40,2:25:4.04:72,4,0	1/1:58,1:30:2.44:57,2,0	0/1:41,3:27:32.59:89,0,33	0/0:86,0:36:5.80:0,6,136	0/1:60,0:25:84.91:85,0,145	0/1:31,1:9:23.72:24,0,65	0/0:54,4:44:3.01:0,3,50	0/0:169,2:41:17.75:0,18,166	0/1:37,1:24:1.91:34,0,2	1/1:20,4:13:6.08:48,6,0	0/0:75,2:33:2.80:0,3,13	0/1:49,2:31:0.55:1,0,1	0/1:45,2:28:41.33:41,0,298	0/1:34,2:16:74.46:74,0,102	0/0:23,0:10:8.49:0,8,110
chr10	7817485	.	G	GCATT	325.12	PASS	AB=0.955;AC=12;AF=0.231;AN=52;BaseQRankSum=5.908;DP=1439;FS=13.623;HRun=0;HaplotypeScore=217.7838;InbreedingCoeff=0.0647;MQ=21.16;MQ0=470;MQRankSum=-3.271;QD=0.65;ReadPosRankSum=-4.560;VQSLOD=0.6443;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:89,1:38:2.15:15,0,2	0/0:33,0:23:17.78:0,18,225	./.	./.	0/1:32,4:26:57.94:58,0,189	0/0:45,0:26:9.42:0,9,144	1/1:76,0:23:1.44:4,1,0	0/0:51,0:13:36.11:0,36,541	0/0:59,0:22:15.81:0,16,244	0/1:50,2:28:99:181,0,975	1/1:13,2:10:2.99:23,3,0	0/0:53,0:20:15.53:0,16,167	0/0:54,0:26:27.97:0,28,372	0/0:43,0:24:20.66:0,21,294	0/0:61,0:30:8.69:0,9,200	0/0:44,0:27:21.06:0,21,298	0/0:89,0:36:31.72:0,32,450	0/0:61,0:27:33.08:0,33,526	0/0:30,0:9:18.06:0,18,341	0/0:59,0:44:21.03:0,21,349	0/0:181,0:44:15.61:0,16,329	0/1:35,3:24:27.74:28,0,252	0/1:25,2:14:19.13:83,0,19	0/1:80,1:33:6.40:17,0,6	0/0:50,0:29:3.90:0,4,15	0/1:45,1:25:29.20:29,0,931	0/1:37,1:16:26.24:26,0,374	0/0:23,0:10:18.01:0,18,265
chr10	7817491	.	G	GTC	457.60	PASS	AB=0.997;AC=23;AF=0.442;AN=52;BaseQRankSum=-1.442;DP=1453;FS=0.000;HRun=0;HaplotypeScore=197.9335;InbreedingCoeff=-0.0770;MQ=19.71;MQ0=491;MQRankSum=0.534;QD=0.53;ReadPosRankSum=-4.758;VQSLOD=1.3572;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:90,0:36:11.18:13,0,11	0/1:35,0:25:10.97:14,0,11	./.	./.	1/1:31,2:23:11.45:44,11,0	0/0:46,0:26:10.50:0,10,103	0/1:81,0:26:0.08:0,0,0	0/1:44,0:11:16.58:135,0,17	0/1:64,0:23:9.24:9,0,123	0/0:49,0:25:0.05:0,0,508	1/1:16,0:11:3.04:8,3,0	0/1:49,1:18:19.02:19,0,28	0/1:51,1:24:87.26:87,0,90	1/1:41,0:20:4.48:49,4,0	1/1:59,1:27:5.83:62,6,0	0/1:44,0:25:35.32:54,0,35	0/0:90,0:34:21.76:0,22,209	0/1:65,0:28:12.68:13,0,174	0/1:29,0:8:5.83:6,0,78	0/0:57,0:42:3.01:0,3,46	0/0:192,0:49:17.93:0,18,182	0/1:38,0:22:1.70:2,0,34	1/1:28,0:14:6.08:49,6,0	0/0:82,0:31:2.74:0,3,12	0/0:55,0:32:1.86:0,2,29	0/1:52,0:30:3.16:3,0,471	0/1:36,0:13:36.85:37,0,119	0/0:23,0:8:11.46:0,11,150
chr10	7817519	.	GTC	G	351.70	PASS	AB=0.991;AC=22;AF=0.440;AN=50;BaseQRankSum=1.876;DP=1486;FS=1.883;HRun=0;HaplotypeScore=179.0490;InbreedingCoeff=0.0094;MQ=17.92;MQ0=546;MQRankSum=-2.990;QD=0.34;ReadPosRankSum=0.810;VQSLOD=2.9513;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:84,0:33:0:0,0,0	1/1:34,0:21:0.34:6,0,0	./.	./.	1/1:33,0:18:5.08:14,5,0	0/1:43,0:23:12.75:13,0,97	1/1:79,0:26:1.26:18,1,0	./.	0/1:64,0:23:0.77:1,0,128	0/1:46,1:24:74.03:74,0,111	1/1:18,2:11:0.97:3,1,0	0/1:58,0:21:5.13:61,0,5	0/1:51,0:20:11.43:38,0,11	0/0:47,3:22:5.32:0,5,46	0/0:54,2:24:1.68:0,2,5	0/0:47,0:26:6.30:0,6,29	0/0:102,0:37:5.19:0,5,304	0/0:69,0:27:20.50:0,20,294	0/1:30,0:7:6.30:6,0,92	0/0:63,0:45:5.13:0,5,34	0/1:207,2:53:26.02:26,0,179	0/1:31,2:16:1.54:4,0,2	0/0:27,1:13:2.02:0,2,6	0/1:91,0:32:0.05:0,0,0	1/1:56,1:29:5.38:41,5,0	0/1:50,1:30:86.31:172,0,86	0/1:36,0:11:2.48:2,0,14	0/0:28,0:8:8.95:0,9,115
chr10	7817521	.	CTG	C	683.60	PASS	AB=0.939;AC=24;AF=0.480;AN=50;BaseQRankSum=-0.264;DP=1485;FS=0.000;HRun=0;HaplotypeScore=184.5703;InbreedingCoeff=0.0808;MQ=17.93;MQ0=548;MQRankSum=-1.931;QD=0.68;ReadPosRankSum=0.683;VQSLOD=2.6433;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:82,5:35:0.04:0,0,0	1/1:35,0:22:2.90:8,3,0	./.	./.	1/1:30,4:19:1.08:8,1,0	0/0:40,2:23:3.51:0,4,80	1/1:79,1:26:1.30:35,1,0	./.	0/0:62,0:21:12.41:0,12,124	0/1:44,4:25:92.21:157,0,92	1/1:17,2:11:0.97:3,1,0	0/1:54,6:23:25.95:77,0,26	1/1:42,8:20:3.38:76,3,0	0/0:49,3:24:5.32:0,5,56	0/0:52,2:23:1.79:0,2,6	0/0:45,3:26:1.66:0,2,8	0/1:101,3:39:25.72:26,0,329	0/0:70,0:27:23.72:0,24,316	0/0:28,1:7:12.40:0,12,150	0/0:54,9:46:4.17:0,4,15	0/1:202,2:53:9.11:9,0,230	0/1:28,3:14:0.92:21,0,1	0/0:27,1:13:2.02:0,2,6	1/1:90,1:32:1.08:3,1,0	1/1:50,4:26:5.47:77,5,0	0/1:43,6:28:99:272,0,140	1/1:35,2:12:2.88:22,3,0	0/1:27,0:8:23.87:24,0,66
chr10	7817525	.	G	GCATT	382.56	PASS	AB=0.981;AC=17;AF=0.340;AN=50;BaseQRankSum=4.701;DP=1514;FS=1.986;HRun=0;HaplotypeScore=216.8044;InbreedingCoeff=0.0715;MQ=17.94;MQ0=550;MQRankSum=-2.389;QD=0.57;ReadPosRankSum=-3.927;VQSLOD=2.1206;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:88,0:33:3.45:0,3,22	0/0:36,0:23:5.56:0,6,99	./.	./.	1/1:34,0:19:5.31:16,5,0	0/0:41,0:22:9.50:0,9,156	0/1:78,0:26:2.17:2,0,28	./.	0/0:60,0:20:12.66:0,13,238	0/1:47,4:28:99:282,0,678	0/1:21,1:13:0.04:11,0,0	0/1:63,1:24:28.56:29,0,109	0/0:54,1:25:2.30:0,2,177	0/1:55,0:26:1.95:2,0,63	1/1:51,1:22:2.36:22,2,0	0/1:50,0:28:0.97:1,0,61	0/0:104,0:38:39.51:0,40,605	0/0:71,0:28:27.09:0,27,551	0/0:28,0:7:15.05:0,15,300	0/0:66,0:49:4.07:0,4,65	0/0:203,0:48:18.38:0,18,397	0/0:33,0:16:1.80:0,2,31	1/1:30,0:13:1.73:5,2,0	1/1:95,0:33:1.46:5,1,0	0/1:52,1:26:2.76:3,0,58	0/1:52,1:28:99:115,0,669	0/1:38,0:14:16.98:17,0,153	0/0:30,0:10:12.04:0,12,206
chr10	7817547	.	GTC	G	55.39	PASS	AB=0.994;AC=11;AF=0.212;AN=52;BaseQRankSum=3.400;DP=1423;FS=1.865;HRun=0;HaplotypeScore=205.8851;InbreedingCoeff=-0.0196;MQ=17.92;MQ0=496;MQRankSum=-1.255;QD=0.10;ReadPosRankSum=-4.931;VQSLOD=1.6915;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:83,0:29:7.43:0,7,52	0/1:26,0:17:2.36:2,0,48	./.	./.	1/1:37,1:22:0.90:7,1,0	0/0:37,0:19:2.96:0,3,19	0/1:70,1:23:6.22:13,0,6	0/0:36,0:1:2.98:0,3,21	0/0:45,0:17:3.72:0,4,96	0/1:54,0:31:53.64:54,0,355	0/0:24,0:17:2.04:0,2,7	0/0:55,0:19:5.62:0,6,58	0/1:45,0:22:24.25:40,0,24	0/0:49,0:21:5.95:0,6,70	0/1:53,0:23:0.82:13,0,1	0/1:45,1:27:22.50:23,0,27	0/0:94,0:39:22.78:0,23,423	0/0:57,0:25:29.68:0,30,446	0/0:25,0:6:18.06:0,18,280	0/1:60,0:43:1.85:2,0,47	0/0:198,0:42:15.05:0,15,277	0/0:34,1:22:5.16:0,5,17	0/0:28,0:13:1.95:0,2,6	0/1:87,0:35:0.03:0,0,0	0/0:45,0:24:7.90:0,8,42	0/1:57,1:27:19.16:19,0,296	0/0:39,1:14:13.61:0,14,84	0/0:32,0:11:2.32:0,2,98
chr10	7817551	.	G	GCATT	67.79	PASS	AB=0.994;AC=11;AF=0.212;AN=52;BaseQRankSum=6.276;DP=1476;FS=4.628;HRun=0;HaplotypeScore=254.8583;InbreedingCoeff=0.2170;MQ=18.19;MQ0=499;MQRankSum=2.426;QD=0.19;ReadPosRankSum=-6.584;VQSLOD=0.9667;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:85,0:29:6.44:0,6,82	0/0:26,0:16:11.59:0,12,171	./.	./.	1/1:36,2:22:11.44:62,11,0	0/0:42,0:23:2.68:0,3,20	0/1:69,0:24:18.99:19,0,52	0/0:51,0:6:14.94:0,15,162	0/0:48,0:17:7.31:0,7,168	0/0:56,1:34:0.38:0,0,1131	1/1:28,1:22:0.97:21,1,0	0/0:61,0:22:14.40:0,14,267	0/0:45,1:26:6.52:0,7,290	0/0:48,0:21:1.74:0,2,71	0/1:54,1:26:9.12:18,0,9	0/1:48,0:27:4.40:4,0,137	0/0:92,0:38:32.21:0,32,551	0/0:59,0:27:6.04:0,6,597	0/0:26,0:6:18.06:0,18,377	0/0:56,0:42:2.52:0,3,66	0/0:200,0:42:12.38:0,12,310	1/1:39,1:27:2.30:58,2,0	0/1:33,0:17:0.33:2,0,0	0/0:86,0:35:1.05:0,1,3	0/1:47,0:26:10.98:11,0,88	0/0:60,0:28:62.05:0,62,1031	0/0:41,0:15:17.61:0,18,285	0/0:32,0:11:9.03:0,9,188
chr10	7817573	.	CTG	C	378.17	PASS	AB=0.951;AC=16;AF=0.308;AN=52;BaseQRankSum=-1.745;DP=1344;FS=34.141;HRun=0;HaplotypeScore=229.1874;InbreedingCoeff=-0.1797;MQ=18.44;MQ0=416;MQRankSum=-1.123;QD=0.54;ReadPosRankSum=-0.728;VQSLOD=1.3458;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:73,1:21:15.80:16,0,45	0/0:24,1:18:9.99:0,10,68	./.	0/0:10,0:3:0.51:0,1,32	0/0:29,2:21:2.93:0,3,29	1/1:36,2:19:2.71:34,3,0	0/0:66,0:17:9.44:0,9,55	0/0:67,0:12:19.32:0,19,246	0/1:36,3:17:25.56:26,0,122	0/1:64,1:42:65.95:66,0,252	0/1:31,1:25:0.79:12,0,1	0/0:53,2:24:8.71:0,9,43	0/1:41,3:27:20.34:118,0,20	0/0:45,3:24:5.57:0,6,41	1/1:57,3:28:0.99:3,1,0	0/1:45,2:28:9.10:42,0,9	0/1:65,5:28:54.78:55,0,176	0/1:52,3:28:75.81:76,0,299	0/0:20,0:4:6.02:0,6,90	0/1:42,4:34:1.99:2,0,59	./.	0/0:31,3:24:9.88:0,10,30	0/1:27,2:18:5.41:7,0,5	0/0:70,1:31:4.04:0,4,12	0/0:31,1:18:5.45:0,5,56	0/1:52,2:26:19.64:20,0,160	0/1:38,1:17:39.24:39,0,55	0/0:21,1:9:6.02:0,6,99
chr10	7817579	.	G	GCATT	2231.98	PASS	AB=0.961;AC=23;AF=0.411;AN=56;BaseQRankSum=9.153;DP=1307;FS=12.382;HRun=0;HaplotypeScore=229.5252;InbreedingCoeff=-0.2184;MQ=18.68;MQ0=375;MQRankSum=-0.485;QD=2.51;ReadPosRankSum=-5.512;VQSLOD=-0.0340;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:68,2:22:55.92:136,0,56	0/1:22,2:17:59.65:219,0,60	0/0:13,0:1:2.04:0,2,6	0/0:18,0:4:9:0,9,138	0/1:28,1:20:18.81:42,0,19	0/0:39,0:19:2.58:0,3,37	1/1:63,2:19:10.63:127,11,0	0/0:66,0:14:36.12:0,36,710	0/0:37,0:17:11.59:0,12,241	0/1:65,2:45:99:404,0,1092	0/1:31,0:25:7.32:47,0,7	0/1:52,0:23:74.47:93,0,74	0/1:39,4:27:99:254,0,189	0/1:43,2:24:97.54:143,0,98	0/1:55,3:28:31:31,0,67	0/1:44,3:29:99:229,0,218	0/0:63,0:27:6.14:0,6,376	0/1:55,0:28:8.22:8,0,598	0/0:19,0:5:11.93:0,12,204	0/1:40,3:31:42.29:109,0,42	0/0:142,0:24:3.01:0,3,60	1/1:36,0:28:16.40:101,16,0	1/1:29,0:19:15.92:85,16,0	1/1:66,2:31:3.46:27,3,0	0/1:29,0:18:38.18:66,0,38	0/1:52,1:25:99:130,0,578	0/1:38,1:18:99:146,0,148	0/0:20,0:9:6.02:0,6,126
chr10	7817589	.	CTG	C	1482.20	PASS	AB=0.895;AC=19;AF=0.339;AN=56;BaseQRankSum=-4.387;DP=1217;FS=8.971;HRun=0;HaplotypeScore=214.3666;InbreedingCoeff=-0.1108;MQ=20.56;MQ0=294;MQRankSum=0.035;QD=1.84;ReadPosRankSum=1.391;VQSLOD=1.7233;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:63,0:22:19.57:20,0,41	0/0:20,0:16:5.97:0,6,71	1/1:27,0:3:2.42:8,2,0	0/0:29,0:6:14.62:0,15,158	0/0:19,6:18:0.04:0,0,2	0/0:37,0:18:7.26:0,7,74	0/0:59,0:18:3.65:0,4,21	1/1:58,6:18:6.41:318,6,0	0/0:30,0:15:8.17:0,8,115	0/1:49,15:46:99:550,0,260	1/1:20,10:26:1.25:44,1,0	0/1:42,7:25:22.50:62,0,22	0/1:33,8:30:25.63:67,0,26	0/1:34,8:23:5.07:34,0,5	0/1:47,11:30:29.45:33,0,29	0/1:39,7:31:31.53:138,0,32	0/0:57,0:27:10.85:0,11,110	0/1:42,3:24:27.69:28,0,183	0/0:23,0:6:9.03:0,9,126	0/1:43,0:31:2.17:2,0,58	0/1:114,5:21:0:0,0,0	0/0:26,10:30:8.99:0,9,25	0/1:24,4:20:4.02:7,0,4	0/0:47,7:28:4.04:0,4,12	0/0:27,0:16:5.61:0,6,63	0/1:43,9:25:99:264,0,117	0/1:31,2:17:53.99:54,0,73	0/0:14,0:6:6.02:0,6,102
chr10	7817591	.	G	GCATT	4891.45	PASS	AB=0.907;AC=24;AF=0.429;AN=56;BaseQRankSum=7.420;DP=1197;FS=17.865;HRun=0;HaplotypeScore=241.5823;InbreedingCoeff=-0.2308;MQ=20.64;MQ0=293;MQRankSum=2.339;QD=5.34;ReadPosRankSum=-3.874;VQSLOD=1.7957;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:60,3:22:54.66:208,0,55	0/1:16,4:16:91.59:319,0,92	0/0:28,0:3:2.84:0,3,9	0/0:30,0:6:13.28:0,13,215	0/1:23,2:19:29.16:61,0,29	0/0:35,0:18:8.71:0,9,181	1/1:55,2:17:5.11:161,5,0	0/0:62,0:18:48.12:0,48,647	0/0:31,0:15:10.08:0,10,234	0/1:53,11:46:99:940,0,849	0/1:26,5:26:4.69:120,0,5	0/1:43,5:25:24.54:319,0,25	0/1:35,4:30:99:519,0,242	0/1:36,4:23:22.87:266,0,23	0/0:58,0:30:2.57:0,3,91	0/1:38,6:29:99:246,0,229	0/1:52,1:26:61.34:61,0,300	0/1:42,3:24:99:182,0,542	0/0:23,0:6:12.04:0,12,246	0/1:38,3:30:44.20:210,0,44	0/1:119,0:22:0:0,0,0	1/1:31,5:30:16.39:227,16,0	1/1:23,4:19:13.78:173,14,0	1/1:51,0:27:0.76:21,1,0	0/1:24,2:15:51.97:52,0,56	0/1:44,6:25:99:451,0,443	0/1:28,5:17:99:354,0,191	0/0:14,0:6:6.02:0,6,126
chr10	7817599	.	GTC	G	550.19	PASS	AB=0.991;AC=16;AF=0.286;AN=56;BaseQRankSum=-3.071;DP=1064;FS=3.823;HRun=0;HaplotypeScore=194.2470;InbreedingCoeff=-0.1135;MQ=22.56;MQ0=234;MQRankSum=-2.621;QD=0.81;ReadPosRankSum=-0.225;VQSLOD=2.4265;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:20:5.56:0,6,64	0/0:18,0:14:8.84:0,9,81	1/1:39,0:5:7.33:24,7,0	0/0:49,0:8:16.72:0,17,163	0/0:25,0:20:5.52:0,6,25	0/0:32,0:18:9:0,9,126	0/1:45,0:13:2.08:5,0,2	0/1:50,0:17:99:127,0,117	0/0:26,0:16:11.41:0,11,133	0/1:61,1:44:99:247,0,350	0/1:27,1:25:8.41:12,0,8	0/1:43,0:24:14.22:39,0,14	0/1:35,0:26:18.41:18,0,61	0/1:32,1:20:10.51:11,0,20	0/1:52,0:27:12.17:12,0,55	0/1:38,0:25:66.43:66,0,85	0/0:45,1:24:15.31:0,15,103	0/1:39,0:22:1.79:2,0,123	0/0:20,0:6:11.57:0,12,141	0/0:34,0:28:12.21:0,12,84	0/1:92,1:18:0:0,0,0	0/0:31,2:28:12.97:0,13,52	0/0:22,0:16:7.08:0,7,27	0/1:42,1:22:0.19:0,0,3	0/0:21,0:15:5.93:0,6,78	0/1:47,0:23:99:106,0,208	0/1:28,0:15:22.46:22,0,93	0/0:8,0:5:6.02:0,6,93
chr10	7818172	.	C	CT	503.02	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-6.601;DP=624;FS=2.067;HRun=7;HaplotypeScore=91.7414;InbreedingCoeff=0.9740;MQ=61.58;MQ0=0;MQRankSum=0.181;QD=19.35;ReadPosRankSum=1.104;VQSLOD=3.2181;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,19:25:35.78:598,36,0	0/0:13,0:13:39.05:0,39,371	0/0:13,0:8:14.98:0,15,132	0/0:16,0:10:17.58:0,18,148	0/0:32,0:32:96.15:0,96,924	0/0:16,0:16:45.06:0,45,429	0/0:15,0:15:44.97:0,45,421	0/0:43,0:44:99:0,108,1037	0/0:20,0:20:57.09:0,57,550	0/0:36,0:36:90.04:0,90,865	0/0:22,0:21:57.08:0,57,545	0/0:16,0:16:45.07:0,45,434	0/0:17,0:17:39.03:0,39,376	0/0:26,0:26:69.11:0,69,665	0/0:26,0:26:72.08:0,72,689	0/0:23,0:23:63.09:0,63,608	0/0:25,0:25:66.09:0,66,630	0/0:17,0:17:42.07:0,42,405	0/0:19,0:18:42.06:0,42,405	0/0:34,0:34:93.15:0,93,896	0/0:11,0:11:27.03:0,27,261	0/0:15,0:15:45.06:0,45,428	0/0:28,0:28:69.09:0,69,662	0/0:13,0:13:33.05:0,33,319	0/0:28,0:28:81.13:0,81,780	0/0:26,0:26:75.11:0,75,718	0/0:32,0:32:90.13:0,90,869	0/0:15,0:15:42.07:0,42,405
chr10	7818343	.	TC	T	555.29	PASS	AB=0.730;AC=9;AF=0.161;AN=56;BaseQRankSum=7.659;DP=520;FS=0.442;HRun=2;HaplotypeScore=134.1867;InbreedingCoeff=-0.0985;MQ=66.30;MQ0=6;MQRankSum=-6.570;QD=3.70;ReadPosRankSum=3.457;VQSLOD=0.5607;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:16,5:20:41.76:105,0,42	0/1:2,1:3:10.63:11,0,11	0/0:29,0:14:36.11:0,36,497	0/0:39,0:24:63.14:0,63,862	0/0:29,0:29:67.91:0,68,433	0/1:12,6:18:51.41:67,0,51	0/1:11,10:21:64.39:64,0,86	0/0:26,0:26:42.60:0,43,421	0/1:6,10:16:40.28:87,0,40	0/0:17,0:17:49.20:0,49,291	0/0:16,0:16:34.96:0,35,236	0/0:12,0:12:14.59:0,15,194	0/0:17,0:17:47.29:0,47,322	0/0:13,0:13:36.35:0,36,244	0/0:27,0:26:69.67:0,70,451	0/0:19,0:19:51.15:0,51,321	0/1:8,3:11:27.22:27,0,56	0/0:11,0:11:28.54:0,29,206	0/1:13,3:15:59.17:71,0,59	0/1:11,8:19:57.68:94,0,58	0/0:13,0:13:38.42:0,38,247	0/0:15,0:14:38.24:0,38,237	0/0:17,0:17:48.61:0,49,319	0/0:25,0:25:71.18:0,71,492	0/1:11,14:25:2.94:169,0,3	0/0:17,0:15:43.98:0,44,276	0/0:20,0:20:51.78:0,52,372	0/0:8,0:8:20.86:0,21,152
chr10	7818346	.	TCC	T	1343.30	PASS	AB=0.735;AC=10;AF=0.179;AN=56;BaseQRankSum=8.442;DP=514;FS=7.168;HRun=2;HaplotypeScore=142.7101;InbreedingCoeff=0.0915;MQ=65.65;MQ0=6;MQRankSum=-8.145;QD=9.08;ReadPosRankSum=5.404;VQSLOD=0.5712;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:16,5:20:27.04:163,0,27	0/1:2,1:3:5.33:29,0,5	0/0:29,0:13:32.86:0,33,558	0/0:41,0:25:60.10:0,60,943	0/0:27,0:27:71.28:0,71,993	0/1:12,6:18:14.83:176,0,15	0/1:11,10:21:57.81:169,0,58	0/0:25,0:25:68.88:0,69,868	0/1:7,10:17:10.17:199,0,10	0/0:18,0:18:50.52:0,51,568	0/0:16,0:16:43.54:0,44,528	0/0:12,0:12:32.89:0,33,537	0/0:16,0:16:46.97:0,47,616	0/0:13,0:13:35.71:0,36,590	0/0:26,0:25:71.23:0,71,971	0/0:18,0:18:53.10:0,53,809	0/1:9,3:12:24.79:100,0,25	0/0:10,0:10:30.10:0,30,543	0/1:9,3:11:28.03:100,0,28	0/1:9,9:18:26.15:173,0,26	0/0:13,0:13:38.79:0,39,630	0/0:15,0:14:38.46:0,38,501	0/0:17,0:17:35.36:0,35,572	0/0:25,0:25:71.74:0,72,1219	1/1:12,14:26:19.08:385,19,0	0/0:18,0:16:47.41:0,47,715	0/0:20,0:20:58.92:0,59,786	0/0:7,0:7:20.80:0,21,319
chr10	7818550	.	TACAC	T	1837.75	PASS	AB=0.765;AC=13;AF=0.250;AN=52;BaseQRankSum=-2.532;DP=551;FS=11.157;HRun=0;HaplotypeScore=126.5551;InbreedingCoeff=0.3818;MQ=55.91;MQ0=19;MQRankSum=0.436;QD=10.38;ReadPosRankSum=2.256;VQSLOD=2.6707;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:16,6:22:11.78:129,0,12	0/1:7,5:14:4.80:198,0,5	./.	./.	0/0:22,0:22:14.64:0,15,245	0/1:14,13:27:19.24:261,0,19	1/1:17,5:22:15.04:216,15,0	0/0:26,0:26:37.40:0,37,476	0/1:12,8:20:25.89:210,0,26	0/0:17,0:17:28.57:0,29,397	0/0:11,0:20:6.12:0,6,51	0/0:12,0:25:11.95:0,12,161	0/0:12,0:12:8.96:0,9,139	0/0:11,0:22:6.02:0,6,104	0/0:15,0:24:5.86:0,6,40	0/0:17,0:18:17.63:0,18,244	1/1:7,12:20:30.09:451,30,0	0/0:9,0:11:10.28:0,10,167	0/1:17,0:16:36.63:40,0,37	1/1:9,6:16:24.02:311,24,0	0/0:23,0:21:7.57:0,8,94	0/0:12,0:22:11.70:0,12,209	0/0:11,0:11:12.04:0,12,202	0/0:21,0:21:32.68:0,33,478	1/1:7,8:18:5.55:185,6,0	0/0:20,0:20:29.55:0,30,396	0/0:6,0:18:12.03:0,12,181	0/0:5,0:4:3.01:0,3,51
chr10	7818582	.	C	CACACAC	2899.23	PASS	AB=1.000;AC=31;AF=0.574;AN=54;BaseQRankSum=-8.488;DP=591;FS=4.967;HRun=0;HaplotypeScore=140.1075;InbreedingCoeff=0.6871;MQ=53.37;MQ0=16;MQRankSum=0.233;QD=7.77;ReadPosRankSum=-5.444;VQSLOD=0.2559;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:9:0,9,107	0/0:13,0:12:15.05:0,15,209	./.	0/1:23,0:10:0:0,0,0	1/1:21,0:21:15.02:283,15,0	0/0:35,0:35:17.89:0,18,223	0/1:25,0:25:2.14:2,0,53	1/1:39,0:39:23.01:166,23,0	0/0:21,0:20:20.97:0,21,252	1/1:21,0:21:19.26:262,19,0	0/1:21,0:21:0:0,0,0	1/1:24,0:23:9.03:173,9,0	0/0:7,4:12:1.03:0,1,5	1/1:27,0:27:6.02:192,6,0	1/1:23,0:23:3.01:78,3,0	1/1:17,0:17:12.04:234,12,0	0/0:22,0:22:26.24:0,26,347	0/0:11,0:10:0.71:0,1,2	0/0:16,0:16:2.37:0,2,8	0/0:25,0:25:21.07:0,21,293	1/1:22,0:18:9.02:154,9,0	1/1:26,0:25:5.76:159,6,0	1/1:15,0:15:12.04:215,12,0	1/1:26,0:26:23.55:444,24,0	0/0:17,0:17:18.03:0,18,230	1/1:24,0:23:18.10:404,18,0	1/1:17,0:17:9.03:289,9,0	1/1:2,0:1:2.98:22,3,0
chr10	7821282	.	A	ATG	235.38	PASS	AB=0.938;AC=13;AF=0.232;AN=56;BaseQRankSum=6.586;DP=327;FS=32.864;HRun=0;HaplotypeScore=129.6931;InbreedingCoeff=-0.3254;MQ=47.77;MQ0=39;MQRankSum=-6.538;QD=1.52;ReadPosRankSum=-2.545;VQSLOD=0.5651;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:17,1:14:60.85:61,0,255	0/0:3,0:3:2.17:0,2,47	0/0:12,0:5:7.82:0,8,78	0/0:15,0:5:6.12:0,6,58	0/0:8,0:8:18.52:0,19,267	0/0:9,1:9:9.87:0,10,172	0/0:8,0:5:15.05:0,15,232	0/1:14,3:11:25.65:56,0,26	0/1:13,0:12:39.45:39,0,163	0/0:13,0:11:17.19:0,17,291	0/1:8,0:6:25.86:26,0,132	0/1:8,0:6:30.61:31,0,74	0/1:6,0:6:5.68:6,0,191	0/1:8,0:7:6.12:6,0,122	0/0:7,0:7:15.03:0,15,217	0/1:15,0:15:8.33:8,0,313	0/0:11,0:11:15.01:0,15,193	0/0:14,0:12:24.67:0,25,298	0/1:15,0:9:14.43:14,0,171	0/1:7,5:12:70.98:71,0,150	0/0:16,0:12:12.68:0,13,103	0/0:13,2:13:3.44:0,3,349	0/1:9,1:8:1.45:1,0,139	0/0:13,0:12:25.90:0,26,350	0/0:16,3:17:7.32:0,7,401	0/1:13,1:12:12.24:12,0,284	0/1:9,2:9:43.30:43,0,141	0/0:7,1:8:2.63:0,3,166
chr10	7821312	.	A	ATG	62.73	PASS	AB=0.845;AC=11;AF=0.196;AN=56;BaseQRankSum=4.284;DP=352;FS=5.125;HRun=0;HaplotypeScore=159.6147;InbreedingCoeff=-0.0865;MQ=34.97;MQ0=43;MQRankSum=-0.619;QD=0.52;ReadPosRankSum=-3.109;VQSLOD=1.0373;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,2:12:17.72:0,18,146	0/0:4,0:4:10.16:0,10,87	1/1:8,0:4:0.94:1,1,0	0/1:12,0:2:3.17:6,0,3	0/1:4,11:15:17.21:17,0,106	0/0:10,2:11:23.70:0,24,218	0/0:12,2:12:28.01:0,28,338	0/1:20,3:16:90.92:91,0,175	0/0:16,3:18:4.32:0,4,309	0/1:11,2:10:27.40:27,0,210	0/1:3,5:7:0.73:1,0,20	0/0:6,0:6:17.61:0,18,160	0/0:6,0:6:11.76:0,12,147	0/0:17,1:17:30.79:0,31,275	0/0:6,2:8:12.76:0,13,151	0/0:13,1:14:35:0,35,387	0/0:15,1:14:30.55:0,31,303	0/1:12,1:12:5.55:6,0,286	0/0:16,1:12:5.67:0,6,173	0/1:5,0:5:5.33:5,0,59	0/0:13,1:10:4.52:0,5,74	0/0:10,5:13:14.28:0,14,176	0/0:7,3:8:6.02:0,6,72	0/0:4,0:4:1.92:0,2,18	0/1:16,2:17:7.81:8,0,150	0/0:18,3:14:7.02:0,7,304	0/0:13,2:14:21.25:0,21,130	0/1:4,1:4:21.26:21,0,23
chr10	7821342	.	AAGAC	A	4205.13	PASS	AB=0.500;AC=49;AF=0.907;AN=54;BaseQRankSum=1.501;DP=131;FS=1.506;HRun=0;HaplotypeScore=150.2155;InbreedingCoeff=0.3419;MQ=68.34;MQ0=3;MQRankSum=-1.670;QD=42.05;ReadPosRankSum=2.553;VQSLOD=4.2451;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,1:1:3.01:45,3,0	1/1:0,2:2:6.01:62,6,0	0/0:10,0:6:7.24:0,7,169	0/0:19,0:8:15.52:0,16,330	0/1:0,3:3:5.47:12,0,5	1/1:0,9:9:27.09:453,27,0	1/1:0,2:2:6.02:111,6,0	./.	1/1:0,7:7:18.53:342,19,0	1/1:0,4:4:12.04:249,12,0	1/1:1,4:5:2.10:61,2,0	1/1:0,2:2:6.02:121,6,0	1/1:0,7:7:21.07:433,21,0	1/1:1,9:10:27.09:477,27,0	1/1:0,2:2:6.02:103,6,0	1/1:0,5:5:15.05:296,15,0	1/1:0,3:3:3.01:62,3,0	1/1:0,2:2:6.02:108,6,0	1/1:0,3:3:9.03:170,9,0	1/1:0,4:4:9.43:112,9,0	1/1:0,2:2:2.51:43,3,0	1/1:1,4:5:10.71:177,11,0	1/1:0,5:5:11.40:100,11,0	1/1:0,1:1:3.01:62,3,0	1/1:2,4:6:14.28:129,14,0	1/1:0,4:4:9.03:187,9,0	1/1:0,5:5:14.72:237,15,0	1/1:0,1:1:3.01:53,3,0
chr10	7821364	.	GTT	G	1578.81	PASS	AB=1.000;AC=43;AF=0.935;AN=46;BaseQRankSum=1.578;DP=66;FS=0.000;HRun=2;HaplotypeScore=137.1548;InbreedingCoeff=-0.0468;MQ=61.78;MQ0=0;MQRankSum=-1.732;QD=25.06;ReadPosRankSum=1.578;VQSLOD=2.5220;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,1:1:3.01:31,3,0	1/1:0,1:1:2.92:17,3,0	0/0:2,0:1:0:0,0,0	0/1:6,0:4:19.03:19,0,21	1/1:0,3:3:2.67:14,3,0	1/1:0,7:7:21.05:261,21,0	./.	./.	1/1:0,4:4:9.03:144,9,0	1/1:0,3:3:9.03:143,9,0	1/1:0,5:5:3.01:49,3,0	1/1:0,1:1:3.01:49,3,0	1/1:0,4:4:12.04:194,12,0	1/1:0,5:5:15.05:204,15,0	1/1:0,1:1:3.01:33,3,0	1/1:0,1:1:3.01:49,3,0	./.	./.	1/1:0,1:1:3.01:32,3,0	1/1:0,3:3:5.90:44,6,0	./.	1/1:0,3:3:3.48:38,3,0	1/1:0,3:3:3.15:12,3,0	1/1:0,1:1:3.01:48,3,0	1/1:0,3:3:5.58:32,6,0	1/1:0,1:1:3.01:47,3,0	1/1:0,5:5:12.51:167,13,0	1/1:0,1:1:3.01:39,3,0
chr10	7821369	.	GTT	G	1408.73	PASS	AC=42;AF=0.955;AN=44;BaseQRankSum=1.654;DP=62;FS=0.000;HRun=3;HaplotypeScore=141.7956;InbreedingCoeff=0.1155;MQ=43.67;MQ0=0;MQRankSum=-1.732;QD=24.71;ReadPosRankSum=1.654;VQSLOD=2.2231;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,1:1:3:28,3,0	1/1:0,1:1:2.84:14,3,0	./.	0/0:3,0:2:2.99:0,3,23	1/1:0,3:3:1.38:3,1,0	1/1:0,7:7:21.02:240,21,0	./.	./.	1/1:0,4:4:9.03:135,9,0	1/1:0,3:3:9.03:134,9,0	1/1:0,5:5:3.01:45,3,0	1/1:0,1:1:3.01:45,3,0	1/1:0,4:4:12.04:182,12,0	1/1:0,5:5:15.04:189,15,0	1/1:0,1:1:3.01:30,3,0	1/1:0,1:1:3.01:46,3,0	./.	./.	1/1:0,1:1:3:29,3,0	1/1:0,3:3:5.90:41,6,0	./.	1/1:1,2:3:3.45:22,3,0	1/1:0,3:3:2.37:9,2,0	1/1:0,1:1:3.01:45,3,0	1/1:0,3:3:5.18:26,5,0	1/1:0,1:1:3.01:44,3,0	1/1:0,5:5:12.03:153,12,0	1/1:0,1:1:3.01:36,3,0
chr10	7821381	.	AAATC	A	1343.23	PASS	AB=0.500;AC=41;AF=0.976;AN=42;BaseQRankSum=1.657;DP=59;FS=3.405;HRun=0;HaplotypeScore=143.9420;InbreedingCoeff=-0.1217;MQ=43.71;MQ0=0;MQRankSum=1.657;QD=23.57;ReadPosRankSum=1.506;VQSLOD=3.7461;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,1:1:2.99:24,3,0	1/1:0,1:1:2.88:15,3,0	./.	./.	0/1:0,3:3:5.40:12,0,5	1/1:0,7:7:20.95:213,21,0	./.	./.	1/1:0,4:4:9.03:124,9,0	1/1:0,3:3:9.03:128,9,0	1/1:0,5:5:2.08:42,2,0	1/1:0,1:1:3.01:43,3,0	1/1:0,4:4:12.04:172,12,0	1/1:0,5:5:15.01:159,15,0	1/1:0,1:1:2.99:23,3,0	1/1:0,1:1:3.01:43,3,0	./.	./.	1/1:0,1:1:3:27,3,0	1/1:0,3:3:6.42:42,6,0	./.	1/1:0,3:3:2.89:33,3,0	1/1:0,3:3:4.92:24,5,0	1/1:0,1:1:3.01:43,3,0	1/1:0,3:3:5.36:22,5,0	1/1:0,1:1:3.01:42,3,0	1/1:0,5:5:14.68:154,15,0	1/1:0,1:1:3.01:35,3,0
chr10	7821386	.	GCATCTTA	G	2116.55	PASS	AC=42;AF=1.000;AN=42;BaseQRankSum=1.257;DP=59;FS=0.000;HRun=0;HaplotypeScore=144.1873;InbreedingCoeff=-0.0991;MQ=43.71;MQ0=0;MQRankSum=-1.461;QD=37.13;ReadPosRankSum=1.121;VQSLOD=3.4734;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,1:1:3.01:36,3,0	1/1:0,1:1:2.74:12,3,0	./.	./.	1/1:0,3:3:5.36:28,5,0	1/1:0,7:7:21.06:297,21,0	./.	./.	1/1:0,4:4:9.50:165,10,0	1/1:0,3:3:9.03:193,9,0	1/1:0,5:5:8.94:104,9,0	1/1:0,1:1:3.01:64,3,0	1/1:0,4:4:12.04:251,12,0	1/1:0,5:5:15.05:266,15,0	1/1:0,1:1:3.01:32,3,0	1/1:0,1:1:3.01:65,3,0	./.	./.	1/1:0,1:1:3.01:49,3,0	1/1:0,3:3:5.04:34,5,0	./.	1/1:0,3:3:7.24:71,7,0	1/1:0,3:3:8.28:53,8,0	1/1:0,1:1:3.01:64,3,0	1/1:0,3:3:5.97:56,6,0	1/1:0,1:1:3.01:64,3,0	1/1:0,5:5:10.61:224,11,0	1/1:0,1:1:3.01:64,3,0
chr10	7824300	.	C	CTCTA	4539.09	PASS	AB=0.750;AC=33;AF=0.635;AN=52;BaseQRankSum=0.735;DP=586;FS=6.005;HRun=0;HaplotypeScore=110.6207;InbreedingCoeff=0.6993;MQ=54.99;MQ0=12;MQRankSum=-2.002;QD=12.44;ReadPosRankSum=0.802;VQSLOD=3.5687;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:12,0:13:3.22:13,3,0	0/0:12,0:12:15.05:0,15,228	./.	./.	1/1:29,1:32:22.53:258,23,0	0/0:19,0:19:21.04:0,21,297	0/0:15,0:15:17.98:0,18,222	1/1:40,0:32:2.97:20,3,0	0/0:17,0:17:30.03:0,30,407	1/1:23,0:25:44.25:571,44,0	1/1:38,0:37:14.61:170,15,0	1/1:6,0:10:6.07:58,6,0	0/0:11,0:11:0.59:0,1,2	1/1:20,0:19:0.65:2,1,0	1/1:15,5:19:12.04:266,12,0	0/1:12,6:18:18.87:477,0,19	0/0:21,0:20:23.99:0,24,316	1/1:6,0:6:1.85:7,2,0	0/0:19,0:18:18.06:0,18,275	0/0:42,0:42:57.18:0,57,840	1/1:8,3:11:27.07:581,27,0	1/1:12,0:15:3.13:25,3,0	1/1:26,0:29:11.70:95,12,0	1/1:16,0:16:3.01:49,3,0	0/0:25,0:25:39.09:0,39,571	1/1:17,2:19:21.06:431,21,0	1/1:11,18:31:36.12:817,36,0	1/1:8,10:17:30.10:700,30,0
chr10	7824479	.	GTATCTATCTCTCTATC	G	3540.94	PASS	AB=0.943;AC=39;AF=0.696;AN=56;BaseQRankSum=-2.738;DP=605;FS=41.560;HRun=0;HaplotypeScore=199.3034;InbreedingCoeff=0.1296;MQ=58.22;MQ0=20;MQRankSum=-0.475;QD=7.38;ReadPosRankSum=3.077;VQSLOD=1.1404;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:16:0:0,0,2	0/0:4,0:4:0.47:0,0,1	0/0:52,0:21:29.44:0,29,252	0/0:45,0:17:24.74:0,25,190	1/1:5,28:31:17.96:145,18,0	1/1:17,0:16:11.70:125,12,0	0/1:6,0:6:0.03:0,0,0	1/1:45,0:37:77.69:623,78,0	1/1:15,0:15:11.49:119,11,0	0/1:25,0:23:99:173,0,733	0/1:32,0:31:76.42:76,0,159	1/1:2,0:20:8.83:64,9,0	0/1:26,0:24:40.91:41,0,193	0/1:5,0:18:5.87:64,0,6	1/1:10,16:24:12:157,12,0	1/1:16,0:16:1.98:83,2,0	0/1:19,0:13:32.09:35,0,32	0/1:16,0:11:27.41:27,0,90	1/1:3,0:10:23.92:316,24,0	1/1:27,0:22:7.21:58,7,0	1/1:7,0:6:5.93:115,6,0	1/1:11,0:11:5.99:49,6,0	1/1:3,0:15:11.98:98,12,0	1/1:7,0:20:8.57:61,9,0	0/1:14,0:14:0.72:28,0,1	0/1:23,1:23:99:776,0,180	1/1:3,22:24:8.98:210,9,0	1/1:8,0:6:11.97:96,12,0
chr10	7824481	.	ATCTATCTC	A	2964.17	PASS	AB=1.000;AC=36;AF=0.643;AN=56;BaseQRankSum=-2.471;DP=584;FS=13.666;HRun=0;HaplotypeScore=158.2334;InbreedingCoeff=0.2501;MQ=58.81;MQ0=18;MQRankSum=-1.639;QD=6.86;ReadPosRankSum=5.462;VQSLOD=1.3244;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:16:0:0,0,2	0/0:4,0:4:0:0,0,1	0/0:48,0:21:27.07:0,27,249	0/0:44,0:17:24.74:0,25,189	1/1:32,0:30:17.96:145,18,0	0/0:17,0:16:8.40:0,8,74	0/1:6,0:6:0.03:0,0,0	1/1:42,0:34:61.52:604,62,0	0/1:16,0:16:4.19:44,0,4	0/1:24,0:22:99:173,0,491	1/1:33,0:32:1.79:198,2,0	1/1:21,0:19:9:88,9,0	1/1:4,21:23:27:556,27,0	1/1:18,0:17:15.01:151,15,0	1/1:25,0:23:11.49:84,11,0	0/0:15,0:15:0.89:0,1,3	0/1:20,0:12:10.37:25,0,10	0/1:16,0:11:29.35:40,0,29	1/1:11,0:10:9.45:150,9,0	1/1:25,0:20:8.20:60,8,0	0/1:7,0:6:5.96:11,0,6	1/1:1,9:10:5.99:49,6,0	1/1:14,0:14:11.98:98,12,0	1/1:20,0:20:8.78:85,9,0	0/1:13,0:13:6.54:34,0,7	0/1:23,0:22:99:317,0,187	1/1:23,0:23:8.99:112,9,0	1/1:8,0:6:11.97:96,12,0
chr10	7824485	.	ATCTC	A	2948.31	PASS	AB=1.000;AC=41;AF=0.732;AN=56;BaseQRankSum=-1.499;DP=563;FS=18.780;HRun=0;HaplotypeScore=141.5810;InbreedingCoeff=0.2616;MQ=59.93;MQ0=14;MQRankSum=-1.696;QD=6.49;ReadPosRankSum=3.547;VQSLOD=1.5680;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:14:0:0,0,2	0/0:4,0:4:0:0,0,0	0/0:45,0:21:29.37:0,29,260	0/0:37,0:17:22.51:0,23,185	1/1:30,0:29:17.96:145,18,0	0/1:19,0:18:19.17:20,0,19	0/1:5,0:5:0.03:0,0,0	1/1:41,0:33:59.85:603,60,0	1/1:17,0:17:14.52:88,15,0	0/1:24,0:22:99:220,0,162	1/1:8,25:32:29.89:303,30,0	1/1:20,0:18:8.67:61,9,0	1/1:24,0:23:26.99:286,27,0	1/1:17,0:16:14.64:103,15,0	1/1:23,0:22:11.91:92,12,0	1/1:15,0:15:2.27:17,2,0	0/1:19,0:11:6.13:26,0,6	1/1:15,2:12:12.59:177,13,0	1/1:10,0:10:21.90:163,22,0	1/1:24,0:19:8.63:61,9,0	0/1:7,0:6:9.28:11,0,9	1/1:9,0:9:5.98:49,6,0	1/1:13,0:13:11.98:98,12,0	1/1:19,0:19:8.37:57,8,0	0/1:13,0:13:4.06:37,0,4	0/1:23,0:22:86.84:304,0,87	1/1:23,0:23:8.78:84,9,0	1/1:9,0:6:11.97:96,12,0
chr10	7824495	.	C	CG	652.17	PASS	AB=0.955;AC=11;AF=0.212;AN=52;BaseQRankSum=0.850;DP=540;FS=14.642;HRun=0;HaplotypeScore=128.0113;InbreedingCoeff=0.2822;MQ=57.47;MQ0=16;MQRankSum=2.670;QD=5.18;ReadPosRankSum=-4.569;VQSLOD=1.5902;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:17,6:18:2.35:47,2,0	0/1:3,0:3:0:0,0,0	0/0:35,0:18:3.25:0,3,407	0/0:34,0:14:26.40:0,26,342	0/0:29,0:28:17.89:0,18,251	0/0:19,0:18:12.07:0,12,125	./.	0/0:43,0:24:69.22:0,69,938	0/0:13,0:13:4.27:0,4,52	0/0:22,0:20:57.18:0,57,782	0/0:28,0:27:29.90:0,30,395	0/0:21,0:19:12.01:0,12,147	0/0:23,0:22:22.81:0,23,163	0/0:16,0:16:18:0,18,212	0/1:19,0:19:35.67:36,0,114	1/1:11,5:16:11.83:191,12,0	0/0:21,0:13:2.77:0,3,122	0/0:18,0:13:23.38:0,23,239	0/1:9,0:9:5.18:5,0,128	0/0:23,0:21:3.20:0,3,132	1/1:2,6:7:9.03:138,9,0	0/0:12,0:12:9.03:0,9,126	0/0:14,0:14:11.72:0,12,167	0/0:18,0:20:12.03:0,12,149	0/0:15,0:15:0.96:0,1,77	0/1:17,7:23:99:344,0,518	0/1:23,0:23:27.72:28,0,75	./.
chr10	7824499	.	C	CG	1253.61	PASS	AB=0.892;AC=11;AF=0.212;AN=52;BaseQRankSum=1.087;DP=551;FS=12.357;HRun=0;HaplotypeScore=127.8878;InbreedingCoeff=0.2479;MQ=57.02;MQ0=21;MQRankSum=1.636;QD=8.53;ReadPosRankSum=-4.074;VQSLOD=2.3215;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,1:20:3.15:0,3,42	0/1:3,0:3:0:0,0,0	0/0:28,0:14:17.45:0,17,307	0/1:27,0:10:37.91:38,0,175	0/0:29,0:29:20.90:0,21,293	1/1:10,11:19:19.04:292,19,0	./.	0/0:44,0:21:57.10:0,57,752	1/1:6,6:12:17.53:258,18,0	0/0:24,0:22:63.21:0,63,877	0/0:29,0:28:35.92:0,36,479	0/0:22,0:20:12.04:0,12,161	0/0:24,0:23:24:0,24,231	0/0:16,0:17:18.06:0,18,241	0/0:19,0:19:13.86:0,14,172	0/0:16,0:16:11.42:0,11,91	0/1:17,7:16:68.22:199,0,68	0/0:18,0:14:23.28:0,23,277	0/1:10,0:10:99:168,0,102	0/1:19,7:24:99:206,0,100	0/1:8,0:7:6.45:6,0,14	0/0:15,0:15:12.04:0,12,168	0/0:14,0:14:14.71:0,15,191	0/0:22,0:22:12.06:0,12,164	0/1:9,6:15:9.14:234,0,9	0/0:24,0:23:62.47:0,62,747	0/0:23,0:23:11.45:0,11,135	./.
chr10	7825166	.	CT	C	5930.59	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-4.147;DP=281;FS=26.480;HRun=9;HaplotypeScore=42.4658;InbreedingCoeff=0.7087;MQ=72.60;MQ0=0;MQRankSum=-0.131;QD=22.05;ReadPosRankSum=2.466;VQSLOD=3.3860;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,20:22:57.03:522,57,0	1/1:0,5:5:15.01:137,15,0	0/0:8,0:7:5.83:0,6,30	0/0:4,0:3:7.83:0,8,70	1/1:3,10:13:30.01:273,30,0	1/1:2,14:16:36.02:329,36,0	1/1:1,8:9:18.01:165,18,0	1/1:2,17:19:51.01:462,51,0	1/1:1,9:10:18:165,18,0	1/1:1,11:12:30:271,30,0	1/1:3,15:18:32.97:300,33,0	1/1:1,5:6:15.01:137,15,0	1/1:0,7:7:17.79:165,18,0	1/1:0,6:6:18.01:165,18,0	1/1:1,5:6:12:110,12,0	1/1:0,10:10:30.02:275,30,0	1/1:4,16:20:52.95:488,53,0	1/1:0,11:11:30.02:275,30,0	1/1:5,12:17:35.99:324,36,0	1/1:2,14:16:42.02:384,42,0	1/1:1,3:4:9:82,9,0	1/1:0,4:4:12.01:110,12,0	1/1:0,1:1:3:27,3,0	1/1:0,10:10:27.01:247,27,0	1/1:2,5:7:12.01:110,12,0	1/1:2,5:7:15:134,15,0	1/1:2,7:9:18.01:165,18,0	1/1:0,4:4:12.01:110,12,0
chr10	7826167	.	T	TG	360.46	PASS	AC=24;AF=0.800;AN=30;BaseQRankSum=3.303;DP=91;FS=6.468;HRun=0;HaplotypeScore=18.0744;InbreedingCoeff=0.3446;MQ=187.77;MQ0=0;MQRankSum=-5.736;QD=15.02;ReadPosRankSum=-3.250;VQSLOD=3.1617;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:2,4:6:0:0,0,0	1/1:0,1:1:3.01:39,3,0	0/0:29,0:29:78:0,78,987	0/0:21,0:21:51.15:0,51,679	1/1:2,0:2:3:26,3,0	1/1:1,0:1:2.96:19,3,0	./.	1/1:0,5:5:12.01:135,12,0	1/1:0,1:1:3.01:38,3,0	1/1:0,1:1:3.01:45,3,0	./.	./.	./.	1/1:0,2:2:2.96:19,3,0	./.	1/1:1,0:1:2.96:19,3,0	1/1:2,0:2:2.61:22,3,0	./.	./.	./.	1/1:0,2:2:3.01:41,3,0	./.	./.	./.	./.	1/1:0,1:1:3.01:38,3,0	1/1:0,5:5:2.99:24,3,0	./.
chr10	7826399	.	T	TGC	3901.13	PASS	AB=1.000;AC=46;AF=0.852;AN=54;BaseQRankSum=2.492;DP=454;FS=11.938;HRun=0;HaplotypeScore=224.6657;InbreedingCoeff=0.5970;MQ=53.55;MQ0=3;MQRankSum=-2.847;QD=10.75;ReadPosRankSum=2.812;VQSLOD=2.0968;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:41.66:0,42,327	1/1:8,0:8:8.97:102,9,0	0/0:34,0:17:35:0,35,361	0/0:22,0:14:29.25:0,29,267	1/1:10,0:10:5.99:48,6,0	1/1:17,1:18:25.46:185,25,0	1/1:20,0:20:17.60:180,18,0	1/1:23,2:25:66.20:531,66,0	1/1:13,0:13:17.59:112,18,0	1/1:18,0:18:10.43:271,10,0	1/1:11,0:11:6.63:43,7,0	1/1:18,0:18:23.20:135,23,0	1/1:9,0:9:20.63:130,21,0	1/1:14,0:14:11.81:68,12,0	1/1:16,0:16:17.08:91,17,0	1/1:14,0:14:23.61:199,24,0	1/1:14,0:14:14.22:94,14,0	0/1:7,0:7:24.43:96,0,24	0/1:17,0:17:10.49:234,0,10	1/1:24,0:24:35.02:245,35,0	./.	1/1:6,6:12:17.80:153,18,0	1/1:13,0:13:5.90:37,6,0	1/1:14,0:14:11.24:57,11,0	1/1:10,0:10:11.63:78,12,0	1/1:24,1:25:61.47:432,61,0	1/1:11,11:22:32.35:255,32,0	1/1:11,0:11:19.84:127,20,0
chr10	7826409	.	TCGCCC	T	6489.05	PASS	AC=46;AF=0.920;AN=50;BaseQRankSum=3.454;DP=191;FS=2.501;HRun=0;HaplotypeScore=161.4520;InbreedingCoeff=0.5118;MQ=47.54;MQ0=3;MQRankSum=-0.019;QD=41.33;ReadPosRankSum=3.627;VQSLOD=5.1999;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,0:6:12.03:134,12,0	1/1:1,2:3:6.02:93,6,0	0/0:19,0:6:4.93:0,5,135	0/0:9,0:3:7.27:0,7,129	./.	1/1:2,11:13:27.09:537,27,0	1/1:1,9:10:21.06:398,21,0	./.	1/1:0,6:6:12.04:245,12,0	1/1:0,7:7:21.07:442,21,0	1/1:0,6:6:6.49:116,6,0	1/1:0,11:13:20.33:429,20,0	1/1:0,9:9:21.07:424,21,0	1/1:0,6:6:12.04:250,12,0	1/1:0,9:9:15.05:311,15,0	1/1:1,4:5:15.05:296,15,0	1/1:0,3:3:6.02:123,6,0	1/1:0,4:4:12.04:227,12,0	1/1:1,0:1:3.01:52,3,0	1/1:2,9:11:24.07:459,24,0	./.	1/1:0,6:6:15.03:296,15,0	1/1:0,5:5:3.01:61,3,0	1/1:0,5:5:9.03:175,9,0	1/1:0,3:3:6.02:126,6,0	1/1:3,7:10:24.08:489,24,0	1/1:2,10:12:30.10:621,30,0	1/1:0,4:4:9.03:183,9,0
chr10	7826416	.	TGA	T	2265.10	PASS	AB=1.000;AC=45;AF=0.938;AN=48;BaseQRankSum=2.934;DP=165;FS=0.000;HRun=0;HaplotypeScore=177.4394;InbreedingCoeff=0.3728;MQ=48.44;MQ0=1;MQRankSum=0.972;QD=15.20;ReadPosRankSum=2.915;VQSLOD=3.3053;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,0:4:11.36:56,11,0	1/1:1,1:2:3:26,3,0	0/0:14,0:5:5.86:0,6,37	0/1:5,0:3:3.21:3,0,27	./.	1/1:2,5:11:23.57:162,24,0	1/1:2,7:9:17.97:147,18,0	./.	1/1:1,5:6:11.98:99,12,0	1/1:2,4:7:20.82:158,21,0	1/1:3,2:6:6.39:41,6,0	1/1:3,10:13:20.97:175,21,0	1/1:1,8:9:20.98:177,21,0	1/1:1,5:6:11.97:97,12,0	1/1:0,8:9:14.98:124,15,0	1/1:0,4:4:11.99:100,12,0	1/1:0,3:3:5.99:49,6,0	1/1:0,4:4:9:79,9,0	./.	1/1:1,8:10:20.91:163,21,0	./.	1/1:1,4:6:14.83:115,15,0	1/1:0,3:5:3:25,3,0	1/1:1,4:5:8.94:67,9,0	1/1:1,1:3:5.72:30,6,0	1/1:0,7:7:20.93:175,21,0	1/1:3,7:11:29.80:233,30,0	1/1:2,2:4:8.80:68,9,0
chr10	7826441	.	AGG	A	3531.41	PASS	AB=0.800;AC=49;AF=0.980;AN=50;BaseQRankSum=3.260;DP=283;FS=7.169;HRun=2;HaplotypeScore=197.7040;InbreedingCoeff=0.2027;MQ=37.07;MQ0=0;MQRankSum=0.362;QD=12.98;ReadPosRankSum=2.357;VQSLOD=0.7082;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:4:11.36:56,11,0	1/1:5,2:7:8.93:68,9,0	./.	./.	./.	1/1:5,12:17:24.04:237,24,0	1/1:5,10:15:8.18:165,8,0	1/1:5,2:7:4.83:89,5,0	1/1:5,6:11:13.84:122,14,0	1/1:4,7:11:18.57:234,19,0	1/1:10,6:16:6.48:62,6,0	1/1:5,11:16:20.96:196,21,0	1/1:3,10:13:24:255,24,0	1/1:7,8:15:15.01:142,15,0	1/1:6,9:15:18.03:182,18,0	1/1:6,4:10:18.01:167,18,0	1/1:9,3:12:9.87:112,10,0	1/1:2,4:6:5.92:106,6,0	1/1:4,0:4:2.47:7,2,0	1/1:6,10:16:20.95:212,21,0	0/1:6,2:8:0:0,0,0	1/1:7,6:13:15.03:151,15,0	1/1:4,5:9:3:29,3,0	1/1:4,5:9:9.02:95,9,0	1/1:4,4:8:5.44:58,5,0	1/1:3,8:11:32.88:312,33,0	1/1:4,10:14:37.22:345,37,0	1/1:1,4:5:12.03:128,12,0
chr10	7828158	.	A	ATGGTTTTT	28181.70	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-6.127;DP=575;FS=6.354;HRun=0;HaplotypeScore=126.4947;InbreedingCoeff=0.8211;MQ=86.11;MQ0=0;MQRankSum=-8.607;QD=54.40;ReadPosRankSum=3.190;VQSLOD=4.4524;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,6:19:1.74:649,2,0	1/1:2,5:8:18.06:745,18,0	0/0:30,0:29:39.09:0,39,794	0/0:26,0:26:39.60:0,40,977	1/1:9,13:22:39.10:1124,39,0	1/1:14,6:22:24.08:882,24,0	1/1:6,7:14:24.08:993,24,0	1/1:21,5:26:30.08:831,30,0	1/1:9,9:21:27.09:1118,27,0	1/1:12,11:23:45.15:1731,45,0	1/1:12,12:25:48.16:1543,48,0	1/1:11,11:22:39.13:1527,39,0	1/1:13,8:22:30.10:1239,30,0	1/1:6,12:19:33.11:1366,33,0	1/1:16,9:27:30.10:1227,30,0	1/1:8,8:16:24.08:994,24,0	1/1:6,4:12:9.03:329,9,0	1/1:8,4:13:15.05:575,15,0	1/1:18,4:21:27.09:956,27,0	1/1:15,13:30:60.21:2192,60,0	1/1:11,3:17:9.03:302,9,0	1/1:12,8:21:24.08:677,24,0	1/1:6,11:18:36.10:1442,36,0	1/1:7,7:17:15.05:572,15,0	1/1:11,15:26:42.14:1714,42,0	1/1:11,8:20:33.11:1302,33,0	1/1:13,13:26:42.14:1654,42,0	1/1:8,2:10:12.04:497,12,0
chr10	7828343	.	T	TGTTACTG	41430.15	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-3.862;DP=520;FS=13.714;HRun=0;HaplotypeScore=105.3962;InbreedingCoeff=0.8668;MQ=74.91;MQ0=0;MQRankSum=-9.189;QD=85.25;ReadPosRankSum=2.174;VQSLOD=5.2419;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,22:26:42.14:1623,42,0	1/1:0,11:14:32.99:1271,33,0	0/0:16,0:16:48.16:0,48,1216	0/0:18,0:18:48.16:0,48,1253	1/1:9,15:26:57.20:2062,57,0	1/1:2,10:13:30.10:1148,30,0	1/1:5,11:17:45.15:1657,45,0	1/1:11,16:32:93.29:2971,93,0	1/1:4,7:15:24.08:948,24,0	1/1:5,14:20:48.16:1887,48,0	1/1:3,14:20:45.15:1680,45,0	1/1:2,15:20:48.16:1913,48,0	1/1:5,15:21:57.20:2206,57,0	1/1:5,11:18:42.14:1585,42,0	1/1:2,6:10:18.06:683,18,0	1/1:3,15:18:51.18:2011,51,0	1/1:0,4:5:6.02:241,6,0	1/1:3,3:7:8.01:302,8,0	1/1:7,7:19:51.13:1443,51,0	1/1:4,26:34:90.22:3250,90,0	1/1:3,3:7:12.04:411,12,0	1/1:4,15:22:54.10:1874,54,0	1/1:7,17:25:57.20:2165,57,0	1/1:0,8:10:9.03:362,9,0	1/1:9,17:29:72.20:2648,72,0	1/1:3,12:21:57.13:1792,57,0	1/1:5,22:32:69.24:2709,69,0	1/1:1,4:5:15.05:588,15,0
chr10	7828808	.	T	TCAGTA	19542.49	PASS	AC=48;AF=0.923;AN=52;BaseQRankSum=-3.751;DP=468;FS=1.508;HRun=0;HaplotypeScore=130.4086;InbreedingCoeff=0.9165;MQ=72.62;MQ0=1;MQRankSum=-8.313;QD=48.73;ReadPosRankSum=4.538;VQSLOD=4.9237;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,25:35:44.75:1361,45,0	1/1:1,3:4:9.03:272,9,0	0/0:24,0:20:45.11:0,45,828	0/0:30,0:26:50.93:0,51,892	1/1:3,12:16:21:561,21,0	1/1:2,15:17:33.11:962,33,0	1/1:1,14:15:21.07:633,21,0	1/1:12,7:19:39.13:1169,39,0	1/1:5,10:15:24.05:591,24,0	1/1:4,9:13:30.09:834,30,0	1/1:1,7:8:9.03:273,9,0	1/1:1,17:18:33.11:991,33,0	1/1:10,17:27:48.02:1377,48,0	1/1:2,14:16:26.65:816,27,0	1/1:4,20:24:42.11:1201,42,0	1/1:5,18:23:53.95:1561,54,0	1/1:3,12:15:30.10:907,30,0	1/1:4,9:13:27.09:817,27,0	1/1:8,6:14:30.10:845,30,0	1/1:6,10:16:18.06:510,18,0	1/1:6,18:23:17.96:507,18,0	./.	./.	1/1:6,18:24:24.07:726,24,0	1/1:1,10:11:18.06:545,18,0	1/1:3,11:14:33.11:1000,33,0	1/1:4,8:13:18.06:540,18,0	1/1:0,6:6:18.06:545,18,0
chr10	7828825	.	A	ATGTGTGTGTGTG	11473.82	PASS	AB=1.000;AC=45;AF=0.938;AN=48;BaseQRankSum=-3.585;DP=547;FS=25.396;HRun=0;HaplotypeScore=273.5389;InbreedingCoeff=0.1604;MQ=50.83;MQ0=5;MQRankSum=-0.266;QD=25.27;ReadPosRankSum=-1.573;VQSLOD=2.4949;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:0.38:0,0,1	1/1:3,2:5:9.03:468,9,0	./.	./.	1/1:22,0:23:24.02:328,24,0	1/1:22,1:24:17.69:576,18,0	1/1:18,0:19:6.89:141,7,0	0/1:22,0:22:5.93:137,0,6	1/1:14,4:20:27.08:936,27,0	1/1:19,1:19:36.12:1366,36,0	1/1:10,0:9:3.01:54,3,0	1/1:23,2:25:9.03:435,9,0	1/1:17,6:25:33.11:1519,33,0	1/1:18,3:21:15.02:509,15,0	1/1:16,0:22:12.81:183,13,0	1/1:18,0:25:21.20:325,21,0	1/1:16,0:16:15.05:636,15,0	1/1:20,0:20:18.02:672,18,0	1/1:17,0:17:24.04:541,24,0	1/1:15,1:16:6:199,6,0	1/1:29,0:27:11.42:121,11,0	1/1:13,0:13:5.94:95,6,0	./.	1/1:23,0:23:8.80:167,9,0	1/1:14,1:15:15.04:409,15,0	1/1:25,0:22:19.30:498,19,0	1/1:18,0:18:27.09:1161,27,0	./.
chr10	7838876	.	G	GGC	1979.73	PASS	AB=0.958;AC=36;AF=0.692;AN=52;BaseQRankSum=-2.951;DP=141;FS=1.551;HRun=0;HaplotypeScore=156.9375;InbreedingCoeff=0.1348;MQ=68.39;MQ0=5;MQRankSum=-2.186;QD=16.64;ReadPosRankSum=-0.346;VQSLOD=3.8026;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,1:4:11.77:159,12,0	0/0:3,0:2:1.25:0,1,3	0/0:5,0:4:6.02:0,6,83	0/0:6,0:6:15.05:0,15,235	0/1:8,2:10:27.22:42,0,27	1/1:7,0:7:8.95:134,9,0	1/1:2,0:2:3.01:60,3,0	1/1:11,0:10:19.10:312,19,0	0/0:2,0:2:1.95:0,2,5	1/1:3,0:3:9.02:128,9,0	1/1:6,0:6:7.06:115,7,0	1/1:4,0:4:0.91:54,1,0	0/0:4,0:4:1.28:0,1,2	1/1:7,0:7:4.67:112,5,0	0/1:4,0:4:5.34:83,0,5	0/1:4,0:4:0.59:56,0,1	1/1:4,0:4:6.02:107,6,0	1/1:4,0:4:6.02:105,6,0	0/1:8,0:8:41.64:45,0,42	1/1:5,2:7:5.17:95,5,0	1/1:3,0:3:6:68,6,0	1/1:3,0:2:3.01:56,3,0	0/1:7,0:7:2.15:51,0,2	./.	0/1:10,1:11:32.47:196,0,32	1/1:7,0:7:0.56:82,1,0	1/1:1,1:2:4.57:53,5,0	./.
chr10	7839081	.	ATG	A	7522.02	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=1.443;DP=456;FS=11.068;HRun=0;HaplotypeScore=115.1969;InbreedingCoeff=0.6571;MQ=62.18;MQ0=5;MQRankSum=-1.121;QD=18.67;ReadPosRankSum=2.685;VQSLOD=4.4842;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,21:25:45.61:564,46,0	1/1:0,5:5:15.05:188,15,0	0/0:33,0:23:11.30:0,11,153	0/0:20,0:13:14.79:0,15,206	1/1:5,12:17:2.96:20,3,0	1/1:4,10:14:21.07:263,21,0	1/1:6,16:22:48.07:565,48,0	1/1:23,5:28:9.02:112,9,0	1/1:4,15:19:42.01:508,42,0	1/1:5,12:16:36.04:383,36,0	1/1:5,7:12:6.49:76,6,0	1/1:3,11:14:32.98:360,33,0	1/1:8,6:14:12.04:150,12,0	1/1:2,17:19:42.13:524,42,0	1/1:1,6:7:9.03:113,9,0	1/1:2,5:7:12.04:149,12,0	1/1:6,15:21:36.11:450,36,0	1/1:8,19:27:57.18:713,57,0	1/1:8,6:13:14.99:157,15,0	1/1:1,6:7:9.03:113,9,0	1/1:6,5:11:12.03:149,12,0	1/1:4,8:12:9.03:113,9,0	1/1:2,10:12:15.04:188,15,0	1/1:4,14:18:36.12:450,36,0	1/1:2,16:18:14.87:170,15,0	1/1:8,14:22:45.09:520,45,0	1/1:2,14:16:39.12:488,39,0	1/1:4,1:5:3.01:38,3,0
chr10	7843374	.	ATCAAGTAACC	A	38314.37	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=11.427;DP=634;FS=3.202;HRun=0;HaplotypeScore=227.5408;InbreedingCoeff=0.9030;MQ=56.37;MQ0=1;MQRankSum=-13.322;QD=70.30;ReadPosRankSum=4.900;VQSLOD=4.7852;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,147,7117	1/1:1,9:10:24.08:814,24,0	0/0:18,0:18:54.17:0,54,2555	0/0:21,0:21:60.19:0,60,2630	1/1:0,26:26:35.78:1075,36,0	1/1:2,23:25:60.21:2036,60,0	1/1:0,15:15:36.12:1221,36,0	1/1:8,23:31:69.24:2022,69,0	1/1:1,32:33:63.22:2013,63,0	1/1:1,29:30:87.30:2755,87,0	1/1:3,14:16:30.10:1018,30,0	1/1:2,19:21:57.20:1932,57,0	1/1:0,22:23:57.20:1933,57,0	1/1:0,25:25:57.19:1868,57,0	1/1:2,25:27:69.24:2336,69,0	1/1:2,38:40:90.26:2785,90,0	1/1:2,11:13:30.10:1018,30,0	1/1:0,3:3:3.01:102,3,0	1/1:3,20:23:60.20:1923,60,0	1/1:1,19:20:48.16:1501,48,0	1/1:5,17:22:23.59:586,24,0	1/1:4,19:23:45.11:1381,45,0	1/1:1,26:27:51.08:1582,51,0	1/1:1,16:17:17.48:464,17,0	1/1:1,18:19:39.13:1323,39,0	1/1:1,17:18:51.13:1572,51,0	1/1:1,34:35:84.29:2850,84,0	1/1:0,2:2:6.02:203,6,0
chr10	7845158	.	CA	C	9592.45	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=12.201;DP=590;FS=0.331;HRun=7;HaplotypeScore=60.4258;InbreedingCoeff=0.9915;MQ=89.41;MQ0=3;MQRankSum=-3.082;QD=26.21;ReadPosRankSum=3.432;VQSLOD=5.4496;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:51.08:0,51,618	0/0:8,0:8:24.08:0,24,302	0/0:24,0:24:51.16:0,51,620	0/0:24,0:24:37.57:0,38,459	1/1:2,29:31:87.17:877,87,0	0/0:33,0:33:87.28:0,87,1094	0/0:9,0:9:24.06:0,24,287	1/1:9,26:32:43.41:744,43,0	0/0:25,0:25:63.18:0,63,769	1/1:0,26:26:78.16:784,78,0	1/1:1,14:15:42.10:428,42,0	1/1:1,22:23:66.15:673,66,0	1/1:2,22:24:51.11:520,51,0	1/1:3,16:19:48.11:487,48,0	1/1:2,20:21:48.11:490,48,0	1/1:2,17:19:51.12:520,51,0	0/0:14,0:14:36.11:0,36,451	1/1:0,8:8:21.05:214,21,0	0/0:16,1:17:11.52:0,12,457	0/0:33,0:33:96.31:0,96,1206	1/1:3,14:17:33.07:337,33,0	1/1:0,16:16:48.11:490,48,0	1/1:0,27:27:77.75:795,78,0	1/1:0,22:21:60.14:612,60,0	0/0:17,0:17:51.14:0,51,622	1/1:3,28:31:81.17:826,81,0	1/1:2,24:25:63.14:643,63,0	1/1:0,5:5:15.03:153,15,0
chr10	7846724	.	GA	G	10365.29	PASS	AB=0.600;AC=51;AF=0.911;AN=56;BaseQRankSum=-5.164;DP=566;FS=8.522;HRun=10;HaplotypeScore=65.6050;InbreedingCoeff=0.7704;MQ=68.99;MQ0=0;MQRankSum=-3.844;QD=19.71;ReadPosRankSum=5.568;VQSLOD=5.2475;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,0:27:28.03:102,28,0	1/1:0,10:10:26.99:234,27,0	0/0:20,0:16:35.51:0,36,324	0/0:20,0:16:32.09:0,32,306	1/1:1,23:24:26.78:461,27,0	1/1:3,21:24:62.97:547,63,0	1/1:2,16:18:44.99:391,45,0	1/1:8,23:32:72.98:600,73,0	1/1:0,16:16:44.99:391,45,0	1/1:8,20:28:56.91:494,57,0	1/1:6,18:25:22.83:415,23,0	1/1:3,16:19:44.99:391,45,0	1/1:5,15:20:44.96:390,45,0	1/1:0,11:11:32.99:287,33,0	1/1:3,17:20:53.98:467,54,0	1/1:2,13:15:35.99:313,36,0	1/1:6,16:22:15.07:359,15,0	1/1:0,9:9:26.99:234,27,0	1/1:2,20:23:59.96:516,60,0	1/1:4,30:34:80.95:703,81,0	1/1:1,12:13:32.99:287,33,0	1/1:2,18:20:25.73:368,26,0	1/1:5,24:29:65.88:573,66,0	0/1:3,6:9:48.35:86,0,48	1/1:0,10:10:23.99:208,24,0	1/1:2,32:34:95.90:819,96,0	1/1:1,21:22:59.99:521,60,0	1/1:3,9:12:23.99:208,24,0
chr10	7849529	.	G	GA	13994.29	PASS	AB=0.794;AC=52;AF=0.929;AN=56;BaseQRankSum=-3.043;DP=541;FS=3.475;HRun=8;HaplotypeScore=75.3957;InbreedingCoeff=0.4821;MQ=62.69;MQ0=2;MQRankSum=4.563;QD=26.35;ReadPosRankSum=3.296;VQSLOD=5.6861;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,18:18:42.12:485,42,0	0/1:3,7:10:4.27:186,0,4	0/1:14,0:13:18.94:19,0,149	0/0:10,0:10:12.07:0,12,178	1/1:6,35:41:93.23:1059,93,0	1/1:1,17:18:51.15:586,51,0	1/1:3,12:15:30.09:343,30,0	1/1:5,17:22:48.11:532,48,0	1/1:5,15:20:22.91:459,23,0	1/1:7,18:25:54.14:611,54,0	1/1:3,17:20:54.07:601,54,0	1/1:1,17:18:48.14:554,48,0	1/1:3,21:24:56.90:657,57,0	1/1:0,22:22:66.20:762,66,0	1/1:1,22:23:54.16:623,54,0	1/1:1,23:24:60.18:692,60,0	1/1:5,10:15:30.09:344,30,0	1/1:1,13:14:33.10:381,33,0	1/1:4,10:11:27:275,27,0	1/1:3,18:21:53.99:599,54,0	1/1:1,15:16:39.12:450,39,0	1/1:3,11:14:33.10:381,33,0	1/1:1,15:16:45.13:519,45,0	1/1:2,15:17:39.12:450,39,0	1/1:2,25:28:63.05:704,63,0	1/1:3,18:21:54.15:615,54,0	1/1:7,26:33:72.21:831,72,0	1/1:0,8:8:24.07:277,24,0
chr10	7851917	.	T	TC	20863.56	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-11.671;DP=662;FS=2.098;HRun=3;HaplotypeScore=55.5022;InbreedingCoeff=0.9940;MQ=63.52;MQ0=0;MQRankSum=-1.891;QD=36.10;ReadPosRankSum=4.733;VQSLOD=5.2138;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:96.29:0,96,1150	1/1:0,11:11:30.10:420,30,0	0/0:24,0:22:66.16:0,66,749	0/0:25,0:23:60.15:0,60,701	1/1:2,24:26:69.16:941,69,0	1/1:1,35:36:87.29:1218,87,0	1/1:1,19:20:51.17:707,51,0	1/1:3,21:24:63.21:881,63,0	1/1:0,22:22:66.22:924,66,0	1/1:1,23:24:72.23:987,72,0	1/1:2,25:27:69.23:961,69,0	1/1:1,24:25:60.07:840,60,0	1/1:0,21:21:54.18:756,54,0	1/1:2,21:23:57.19:798,57,0	1/1:0,30:30:81.27:1134,81,0	1/1:1,14:15:30.10:420,30,0	1/1:2,27:29:69.23:966,69,0	1/1:0,22:22:63.18:860,63,0	1/1:2,14:16:36.12:504,36,0	1/1:6,27:33:78.21:1068,78,0	1/1:1,27:28:72.24:1007,72,0	1/1:2,23:25:69.23:965,69,0	1/1:1,20:21:60.20:839,60,0	1/1:0,18:18:48.16:672,48,0	1/1:2,24:26:69.23:966,69,0	1/1:4,16:20:51.14:690,51,0	1/1:1,28:29:81.27:1131,81,0	1/1:0,7:7:15.05:210,15,0
chr10	7854609	.	G	GTTTTT	13216.10	PASS	AB=1.000;AC=36;AF=0.643;AN=56;BaseQRankSum=-6.368;DP=524;FS=2.215;HRun=9;HaplotypeScore=161.1266;InbreedingCoeff=0.8322;MQ=74.64;MQ0=0;MQRankSum=-10.195;QD=39.45;ReadPosRankSum=-6.251;VQSLOD=0.3601;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:20.94:0,21,315	0/1:9,0:9:3.04:3,0,207	0/0:25,0:25:40.69:0,41,594	0/0:17,0:16:17.90:0,18,282	1/1:22,8:34:73.23:1395,73,0	0/0:25,0:25:65.83:0,66,935	0/0:20,0:20:42.04:0,42,621	1/1:16,8:25:65.94:1143,66,0	0/1:15,0:15:11.52:12,0,380	1/1:22,1:25:63.05:1224,63,0	1/1:22,2:31:80.20:1308,80,0	1/1:10,0:11:29.85:408,30,0	1/1:16,0:19:56.93:983,57,0	1/1:9,2:14:41.97:829,42,0	1/1:18,7:25:60.15:1352,60,0	1/1:5,8:16:42.07:929,42,0	0/0:18,0:18:31.90:0,32,455	1/1:5,0:6:7.43:144,7,0	0/0:19,0:19:38.87:0,39,483	0/0:35,0:35:83.98:0,84,1121	1/1:7,0:7:11.98:191,12,0	1/1:10,2:16:44.86:761,45,0	1/1:14,1:17:38.84:566,39,0	1/1:10,0:10:15.70:267,16,0	0/0:17,0:17:42.07:0,42,578	1/1:24,0:26:71.58:820,72,0	1/1:24,0:24:71.62:862,72,0	1/1:1,0:1:2.98:21,3,0
chr10	7854645	.	AAGTT	A	16780.01	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-1.835;DP=471;FS=8.626;HRun=0;HaplotypeScore=114.6493;InbreedingCoeff=0.8637;MQ=76.58;MQ0=2;MQRankSum=-8.097;QD=39.02;ReadPosRankSum=4.923;VQSLOD=4.7810;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,13:15:15.05:280,15,0	1/1:0,7:7:18.06:336,18,0	0/0:21,0:21:57.20:0,57,1401	0/0:20,0:19:35.62:0,36,868	1/1:4,24:28:49.84:909,50,0	1/1:4,26:30:72.11:1267,72,0	1/1:1,25:26:57.19:1027,57,0	1/1:1,18:19:51.17:951,51,0	1/1:3,14:16:33.11:616,33,0	1/1:1,21:22:63.18:1110,63,0	1/1:3,11:14:24.08:430,24,0	1/1:2,9:11:18.06:336,18,0	1/1:4,11:15:27.09:503,27,0	1/1:0,16:16:45.15:839,45,0	1/1:3,14:17:39.13:727,39,0	1/1:0,18:18:36.06:633,36,0	1/1:3,16:19:30.10:533,30,0	1/1:2,5:7:7.88:218,8,0	1/1:0,20:20:51.16:894,51,0	1/1:1,30:31:72.18:1282,72,0	1/1:1,8:8:18.06:336,18,0	1/1:1,14:15:35.95:593,36,0	1/1:2,10:12:21.07:392,21,0	1/1:1,11:12:24:403,24,0	1/1:0,10:10:27.09:504,27,0	1/1:0,11:11:33.10:583,33,0	1/1:1,27:28:57.13:1025,57,0	1/1:0,1:1:3.01:56,3,0
chr10	7855195	.	CT	C	2005.36	PASS	AB=1.000;AC=51;AF=0.911;AN=56;BaseQRankSum=4.441;DP=570;FS=30.208;HRun=14;HaplotypeScore=173.1964;InbreedingCoeff=0.4819;MQ=69.70;MQ0=3;MQRankSum=-2.587;QD=3.69;ReadPosRankSum=5.885;VQSLOD=-0.4633;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,14:15:33.58:228,34,0	1/1:12,0:12:18.24:52,18,0	0/0:26,0:18:17.60:0,18,189	0/1:22,0:17:5.65:6,0,28	1/1:35,0:35:50.07:143,50,0	1/1:27,0:27:42.46:121,42,0	1/1:12,0:12:12:34,12,0	0/1:29,0:29:1.03:26,0,1	1/1:19,0:19:22.10:63,22,0	1/1:23,0:23:29.52:86,30,0	1/1:17,0:17:26.38:75,26,0	1/1:17,0:17:18.19:52,18,0	1/1:19,0:19:26.47:75,26,0	1/1:21,0:21:34.58:98,35,0	1/1:19,0:19:38.48:109,38,0	1/1:19,0:19:32.32:92,32,0	0/1:14,0:14:0.06:27,0,0	1/1:10,0:10:8.52:24,9,0	1/1:14,0:14:18.40:53,18,0	1/1:39,0:39:15.56:99,16,0	1/1:18,0:18:14.09:59,14,0	1/1:20,0:20:30.49:87,30,0	1/1:16,0:16:20.18:58,20,0	1/1:21,0:21:30.39:87,30,0	1/1:24,0:24:32.54:93,33,0	1/1:21,0:21:32.12:92,32,0	1/1:25,0:25:38.55:110,39,0	1/1:16,0:16:26.39:75,26,0
chr10	7855206	.	TTTTA	T	19404.76	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-0.018;DP=550;FS=21.351;HRun=0;HaplotypeScore=133.7793;InbreedingCoeff=0.9884;MQ=67.61;MQ0=3;MQRankSum=-3.361;QD=39.68;ReadPosRankSum=5.940;VQSLOD=3.3932;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:42.06:0,42,572	1/1:0,12:12:27.09:470,27,0	0/0:27,0:19:35.66:0,36,504	0/0:18,0:13:31.12:0,31,243	1/1:1,34:35:89.82:1393,90,0	1/1:0,27:27:63.22:1098,63,0	1/1:0,14:14:18.06:311,18,0	1/1:1,21:22:65.20:813,65,0	1/1:0,17:17:33.11:574,33,0	1/1:1,24:25:72.13:1026,72,0	1/1:0,16:16:47.95:732,48,0	1/1:0,15:15:27.09:472,27,0	1/1:1,18:19:39.10:680,39,0	1/1:0,24:24:51.17:890,51,0	1/1:0,22:22:57.20:993,57,0	1/1:0,20:20:48.16:837,48,0	1/1:1,12:13:22.73:414,23,0	1/1:1,8:9:15.34:226,15,0	1/1:0,13:13:39.07:585,39,0	1/1:0,36:36:99:1576,105,0	1/1:0,17:17:42.08:696,42,0	1/1:0,18:18:48.08:800,48,0	1/1:0,15:15:30.42:522,30,0	1/1:0,19:19:45.15:785,45,0	1/1:0,21:21:48.16:837,48,0	1/1:0,17:17:51.15:858,51,0	1/1:7,20:27:78.05:1155,78,0	1/1:1,15:16:21.54:660,22,0
chr10	7855522	.	TTTGTTGTTG	T	8267.41	PASS	AB=0.668;AC=48;AF=0.857;AN=56;BaseQRankSum=3.021;DP=451;FS=33.352;HRun=0;HaplotypeScore=140.7426;InbreedingCoeff=0.4858;MQ=67.69;MQ0=7;MQRankSum=-3.477;QD=22.71;ReadPosRankSum=0.682;VQSLOD=2.5983;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:66.21:0,66,1641	0/1:1,1:4:10.98:77,0,11	0/0:24,0:19:10.99:0,11,156	0/0:25,0:22:17.72:0,18,313	1/1:8,4:15:17.95:307,18,0	1/1:9,6:16:33.09:659,33,0	1/1:12,0:12:4.78:174,5,0	1/1:13,8:18:24.05:351,24,0	1/1:14,12:29:54.17:1290,54,0	1/1:5,6:11:18.05:372,18,0	1/1:5,0:7:3.01:63,3,0	1/1:2,10:12:21.07:560,21,0	1/1:3,10:13:12.04:332,12,0	1/1:7,11:18:21:489,21,0	1/1:6,9:15:21.07:538,21,0	1/1:6,7:13:12.04:301,12,0	1/1:16,0:18:15.01:217,15,0	0/1:9,4:13:10.94:158,0,11	1/1:19,0:19:9.01:137,9,0	1/1:13,9:22:6.02:123,6,0	1/1:8,8:16:3.01:62,3,0	1/1:6,5:12:17.97:298,18,0	1/1:2,2:4:3.01:61,3,0	1/1:7,0:8:6.02:111,6,0	1/1:13,0:15:9.03:174,9,0	1/1:12,10:25:39.12:892,39,0	1/1:5,9:15:21.03:421,21,0	1/1:11,0:11:6.02:101,6,0
chr10	7855577	.	T	TGGTGG	909.79	PASS	AB=0.909;AC=15;AF=0.268;AN=56;BaseQRankSum=2.125;DP=417;FS=8.807;HRun=0;HaplotypeScore=135.1550;InbreedingCoeff=0.0362;MQ=39.43;MQ0=15;MQRankSum=-4.066;QD=6.36;ReadPosRankSum=1.039;VQSLOD=2.0733;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:24:21.02:0,21,364	0/0:6,0:6:18.06:0,18,326	0/0:25,0:2:6.02:0,6,128	0/0:37,0:9:24.08:0,24,504	0/1:8,0:11:3.04:3,0,23	0/0:17,0:16:20.81:0,21,318	0/0:21,0:20:54.18:0,54,1074	0/0:14,0:11:28.30:0,28,516	0/0:25,0:25:53.56:0,54,832	0/1:10,0:9:66.01:66,0,182	1/1:1,2:3:9.01:131,9,0	0/1:12,1:14:86.51:87,0,360	0/1:12,0:12:81.74:82,0,261	0/1:17,3:20:99:204,0,319	0/0:13,0:13:28.16:0,28,373	0/1:11,0:13:11.10:11,0,158	0/0:18,0:18:21.07:0,21,450	0/1:8,0:8:22.21:22,0,185	0/0:21,0:18:50.87:0,51,935	0/0:13,0:12:27.04:0,27,452	0/1:17,0:17:0.08:0,0,0	0/1:12,2:14:99:99,0,188	1/1:5,2:7:15.05:285,15,0	0/1:7,1:8:57.92:58,0,68	0/0:10,0:9:10.58:0,11,164	0/0:18,0:19:8.41:0,8,440	0/0:9,0:9:17.49:0,17,283	0/1:4,0:5:20.52:21,0,128
chr10	7855580	.	ATGG	A	1731.52	PASS	AC=18;AF=0.360;AN=50;BaseQRankSum=-7.316;DP=418;FS=8.950;HRun=0;HaplotypeScore=118.7657;InbreedingCoeff=0.8003;MQ=39.75;MQ0=14;MQRankSum=4.667;QD=11.24;ReadPosRankSum=1.460;VQSLOD=3.0282;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:8,17:24:9.03:121,9,0	1/1:4,2:6:6:64,6,0	./.	./.	0/0:11,0:11:14.99:0,15,169	1/1:9,8:16:5.93:76,6,0	1/1:14,6:20:42.14:571,42,0	0/0:14,0:11:6.02:0,6,72	1/1:13,12:25:15.05:205,15,0	0/0:11,0:9:9.03:0,9,133	0/0:3,0:3:9.03:0,9,115	0/0:14,0:14:11.83:0,12,133	0/0:11,0:11:8.62:0,9,84	0/0:20,0:20:21.01:0,21,255	0/0:14,0:14:15.01:0,15,173	0/0:15,0:15:30.03:0,30,365	1/1:6,11:17:15.05:204,15,0	0/0:6,0:6:2.94:0,3,18	1/1:13,8:18:24.07:325,24,0	1/1:13,1:13:21.07:270,21,0	./.	0/0:13,0:14:14.96:0,15,156	0/0:8,0:8:18:0,18,191	0/0:9,0:9:6.43:0,6,60	1/1:5,4:8:6.02:82,6,0	0/0:22,0:21:27.03:0,27,334	0/0:9,0:9:9.03:0,9,109	0/0:5,0:5:5.99:0,6,62
chr10	7856331	.	C	CACACAC	3582.39	PASS	AC=36;AF=0.692;AN=52;BaseQRankSum=3.781;DP=656;FS=10.204;HRun=0;HaplotypeScore=141.5391;InbreedingCoeff=0.8423;MQ=52.49;MQ0=13;MQRankSum=-5.591;QD=8.29;ReadPosRankSum=-2.947;VQSLOD=1.1051;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:45,0:45:12.03:154,12,0	0/0:12,0:12:9.87:0,10,366	./.	./.	1/1:28,0:28:10.13:77,10,0	0/0:20,0:19:25.91:0,26,357	0/0:30,0:30:45.06:0,45,623	1/1:36,0:35:16.98:138,17,0	0/0:19,0:19:28.50:0,28,723	1/1:22,10:34:47.15:568,47,0	1/1:21,0:21:11.29:139,11,0	1/1:18,0:18:8.44:82,8,0	1/1:18,0:18:3.01:98,3,0	1/1:18,0:17:6.02:76,6,0	1/1:26,0:26:11.80:146,12,0	1/1:24,0:23:13.67:139,14,0	0/0:27,0:27:36.72:0,37,460	1/1:13,0:12:24.69:447,25,0	0/0:11,0:10:2.96:0,3,40	0/0:34,0:34:31.16:0,31,817	1/1:25,0:25:21.97:239,22,0	1/1:20,0:20:23.02:320,23,0	1/1:21,0:21:10.22:136,10,0	1/1:25,0:25:9.03:174,9,0	0/0:26,0:26:55.27:0,55,737	1/1:33,0:33:46.81:341,47,0	1/1:23,0:22:14.96:238,15,0	1/1:4,0:4:8.45:69,8,0
chr10	7857140	.	AACACACACACACACAC	A	9556.73	PASS	AB=0.824;AC=46;AF=0.852;AN=54;BaseQRankSum=3.254;DP=629;FS=7.753;HRun=0;HaplotypeScore=296.1051;InbreedingCoeff=0.4461;MQ=66.75;MQ0=16;MQRankSum=-0.630;QD=17.73;ReadPosRankSum=1.853;VQSLOD=2.4490;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:0.01:0,0,187	1/1:2,8:10:9.03:216,9,0	0/0:29,0:20:6.02:0,6,79	0/0:25,0:19:6.01:0,6,67	1/1:19,1:20:18.04:267,18,0	1/1:17,2:19:21.04:464,21,0	1/1:23,0:21:21.48:251,21,0	1/1:29,0:28:7.37:206,7,0	0/1:15,18:33:99:600,0,149	1/1:24,0:24:36.12:807,36,0	1/1:14,2:16:9.03:247,9,0	1/1:19,0:19:21.07:368,21,0	1/1:21,3:23:15.90:629,16,0	1/1:27,1:27:33.11:716,33,0	1/1:17,2:19:12.04:379,12,0	1/1:29,4:33:30.07:794,30,0	1/1:5,15:19:6.02:264,6,0	1/1:13,0:13:8.97:122,9,0	0/1:11,0:10:0.85:74,0,1	1/1:19,10:29:8.15:47,8,0	1/1:33,0:30:9.03:145,9,0	1/1:13,1:14:9.02:228,9,0	1/1:19,3:21:18.06:464,18,0	1/1:25,2:24:9.03:251,9,0	1/1:16,2:18:18.06:461,18,0	1/1:29,0:28:45.04:870,45,0	1/1:21,2:24:35.43:686,35,0	./.
chr10	7857190	.	CAG	C	246.40	PASS	AB=1.000;AC=18;AF=0.321;AN=56;BaseQRankSum=7.192;DP=645;FS=3.044;HRun=0;HaplotypeScore=208.9964;InbreedingCoeff=-0.3235;MQ=45.09;MQ0=40;MQRankSum=-5.904;QD=0.71;ReadPosRankSum=0.048;VQSLOD=2.7696;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,16:19:2.90:16,3,0	0/1:17,0:17:15.78:16,0,325	0/0:14,0:2:5.99:0,6,56	0/1:26,0:10:7.64:8,0,45	0/0:24,0:23:4.12:0,4,257	0/0:32,0:30:6.21:0,6,650	0/0:25,0:22:4.50:0,4,417	0/0:23,0:22:47.84:0,48,478	0/0:40,0:40:27.46:0,27,853	0/1:24,0:20:66.53:67,0,257	0/1:18,0:18:0.78:1,0,167	0/1:22,0:22:41.86:42,0,129	0/1:27,0:26:73.46:73,0,127	0/1:23,0:22:4.07:4,0,173	0/0:32,0:30:54.57:0,55,580	0/0:35,0:35:11.93:0,12,441	0/0:27,0:26:31.55:0,32,374	0/1:8,0:7:24.98:25,0,39	0/1:11,0:9:15.02:15,0,77	0/1:22,0:22:3.23:3,0,485	0/0:36,0:30:31.17:0,31,273	0/1:15,0:15:14.61:15,0,115	0/1:18,0:16:32.06:32,0,64	0/1:29,0:24:6.03:6,0,26	0/1:24,0:24:6.15:6,0,630	0/1:22,0:17:33.88:34,0,252	0/1:22,0:21:31.15:31,0,332	0/0:8,0:7:20.70:0,21,219
chr10	7857192	.	GACAC	G	5232.66	PASS	AB=0.939;AC=27;AF=0.482;AN=56;BaseQRankSum=-0.936;DP=632;FS=18.552;HRun=0;HaplotypeScore=197.5081;InbreedingCoeff=0.1054;MQ=45.40;MQ0=38;MQRankSum=3.294;QD=12.06;ReadPosRankSum=0.816;VQSLOD=2.9604;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:18,0:17:0:0,0,0	0/1:17,0:18:5.30:5,0,363	0/0:18,0:3:8.99:0,9,90	0/0:28,0:12:27.46:0,27,189	0/1:22,1:24:50.27:292,0,50	0/0:26,0:29:25.47:0,25,855	0/0:23,0:21:33.09:0,33,561	0/1:23,0:22:7.13:262,0,7	0/0:38,0:40:67.93:0,68,1093	1/1:25,0:21:1.92:360,2,0	0/1:14,2:17:52.44:120,0,52	1/1:22,0:22:20.19:334,20,0	1/1:22,3:25:11.95:415,12,0	1/1:21,1:21:16.09:422,16,0	0/1:28,2:28:17.69:571,0,18	0/1:28,4:32:39.60:698,0,40	0/1:25,0:24:13.69:14,0,395	1/1:8,0:7:6.02:70,6,0	0/0:11,0:9:0.89:0,1,2	0/0:23,0:23:6.94:0,7,635	0/1:37,0:31:0.47:316,0,0	1/1:14,1:15:24.07:296,24,0	0/1:12,3:13:19.67:160,0,20	1/1:27,2:25:6.59:125,7,0	0/0:20,0:23:41.76:0,42,865	0/1:20,0:16:2.15:310,0,2	0/1:16,2:18:99:318,0,99	0/1:8,0:7:48.10:146,0,48
chr10	7857196	.	C	CAG	7815.73	PASS	AB=0.739;AC=25;AF=0.446;AN=56;BaseQRankSum=-7.367;DP=653;FS=9.642;HRun=0;HaplotypeScore=179.3035;InbreedingCoeff=0.0283;MQ=46.53;MQ0=38;MQRankSum=2.875;QD=18.09;ReadPosRankSum=1.544;VQSLOD=4.3509;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:18:5.36:0,5,31	0/1:17,1:18:36.19:36,0,272	0/0:21,0:5:8.07:0,8,100	0/0:33,0:15:27.51:0,28,199	1/1:10,15:25:0.45:487,0,0	0/0:29,0:27:35.56:0,36,677	0/0:24,0:21:19.03:0,19,383	1/1:9,18:26:30.67:599,31,0	0/0:40,0:40:44.16:0,44,842	0/1:16,9:21:44.73:491,0,45	0/1:9,10:19:25.62:158,0,26	0/1:10,10:20:10.91:468,0,11	0/1:13,13:25:40.87:506,0,41	1/1:7,15:21:11.46:607,11,0	1/1:12,20:33:30.51:934,31,0	0/1:18,15:33:27.15:950,0,27	0/1:22,1:22:10.89:11,0,352	0/1:7,3:9:26.27:103,0,26	0/0:9,0:7:5.75:0,6,47	0/0:23,0:23:28.41:0,28,442	1/1:10,29:35:20.66:555,21,0	1/1:5,10:15:10.06:396,10,0	0/1:11,4:13:16.84:144,0,17	0/1:22,7:25:3.47:119,0,3	0/0:23,0:23:50:0,50,665	0/1:10,14:20:5.63:564,0,6	0/1:9,7:16:34.60:426,0,35	0/1:3,6:8:15.61:261,0,16
chr10	7858379	.	TA	T	9240.89	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=9.328;DP=634;FS=6.009;HRun=9;HaplotypeScore=71.4079;InbreedingCoeff=0.9591;MQ=79.98;MQ0=0;MQRankSum=-1.604;QD=23.04;ReadPosRankSum=1.388;VQSLOD=5.8397;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:71.87:0,72,797	0/0:6,0:6:18.05:0,18,208	0/0:16,1:16:0.05:0,0,329	0/0:13,0:14:20.21:0,20,194	1/1:1,33:34:95.97:868,96,0	0/0:18,0:18:48.13:0,48,543	0/0:18,0:18:51.15:0,51,589	1/1:4,29:33:83.99:754,84,0	0/0:18,0:18:51.15:0,51,588	1/1:5,25:30:77.82:693,78,0	1/1:1,27:28:77.94:697,78,0	1/1:1,26:27:69.04:631,69,0	1/1:2,23:25:60.03:549,60,0	1/1:2,12:14:27.01:247,27,0	1/1:1,25:26:75.04:686,75,0	1/1:1,18:19:54.03:494,54,0	0/0:29,0:29:58.11:0,58,845	1/1:5,13:18:35.99:329,36,0	0/0:20,0:20:57.15:0,57,641	0/0:38,0:38:99:0,102,1177	1/1:2,12:14:33.02:302,33,0	1/1:2,27:29:74.91:667,75,0	1/1:4,21:25:60.02:549,60,0	1/1:1,7:8:21.01:192,21,0	0/0:29,0:29:81.22:0,81,916	1/1:6,20:26:28.40:511,28,0	1/1:2,36:38:96.05:878,96,0	1/1:0,7:7:21.01:192,21,0
chr10	7858564	.	AG	A	21614.58	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=1.431;DP=658;FS=0.000;HRun=1;HaplotypeScore=68.8876;InbreedingCoeff=0.9792;MQ=90.61;MQ0=0;MQRankSum=-6.949;QD=38.53;ReadPosRankSum=6.644;VQSLOD=4.7066;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,126,1900	1/1:0,10:10:30.10:416,30,0	0/0:30,0:30:75.21:0,75,1216	0/0:25,0:25:72.10:0,72,1046	1/1:0,19:19:57.19:797,57,0	1/1:0,23:23:66.22:923,66,0	1/1:0,28:28:72.24:1007,72,0	1/1:0,23:23:69.23:965,69,0	1/1:0,20:20:54.18:755,54,0	1/1:0,32:33:99:1342,99,0	1/1:2,22:24:66.22:923,66,0	1/1:0,27:27:66.22:923,66,0	1/1:1,19:20:57.18:778,57,0	1/1:0,22:22:57.19:797,57,0	1/1:0,34:34:96.32:1343,96,0	1/1:0,16:16:42.14:587,42,0	1/1:0,28:28:72.24:1007,72,0	1/1:0,11:11:30.10:419,30,0	1/1:0,25:25:75.20:1009,75,0	1/1:0,23:23:63.21:873,63,0	1/1:0,29:29:81.27:1133,81,0	1/1:0,17:17:45.15:629,45,0	1/1:0,28:28:78.26:1091,78,0	1/1:0,30:30:81.27:1133,81,0	1/1:0,22:22:63.21:881,63,0	1/1:0,21:21:63.21:879,63,0	1/1:0,25:25:63.21:881,63,0	1/1:0,3:3:9.03:126,9,0
chr10	7860727	.	C	CGTGTGT	3786.42	PASS	AC=28;AF=0.560;AN=50;BaseQRankSum=-0.779;DP=694;FS=0.000;HRun=0;HaplotypeScore=169.3053;InbreedingCoeff=0.7798;MQ=63.86;MQ0=17;MQRankSum=-3.044;QD=10.76;ReadPosRankSum=-2.397;VQSLOD=2.4514;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:37:7.78:0,8,72	0/0:7,0:8:12.04:0,12,223	./.	./.	1/1:15,0:22:6.02:77,6,0	0/0:21,0:21:20.84:0,21,336	0/0:34,0:35:13.98:0,14,278	1/1:24,0:24:17.94:288,18,0	0/0:23,0:25:27.98:0,28,527	1/1:20,0:27:33:526,33,0	0/0:12,2:20:2.87:0,3,16	1/1:15,8:29:9.03:228,9,0	1/1:17,6:25:20.97:470,21,0	./.	1/1:17,7:30:2.85:38,3,0	1/1:11,3:20:8.94:230,9,0	0/0:22,0:23:24.08:0,24,463	1/1:12,0:12:12.01:278,12,0	1/1:18,0:22:5.12:62,5,0	0/0:16,0:18:27.04:0,27,472	1/1:47,0:43:15.03:251,15,0	0/0:19,0:22:0.47:0,0,1	0/0:21,1:25:0.78:0,1,2	1/1:15,9:30:9.03:170,9,0	0/0:17,0:19:12.02:0,12,188	1/1:21,0:27:33.08:621,33,0	1/1:8,3:20:15.05:365,15,0	1/1:10,0:9:9.02:180,9,0
chr10	7863098	.	T	TAGAC	16357.05	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-16.403;DP=784;FS=3.606;HRun=0;HaplotypeScore=153.9900;InbreedingCoeff=0.9879;MQ=72.71;MQ0=6;MQRankSum=1.162;QD=35.64;ReadPosRankSum=1.880;VQSLOD=5.2044;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:93.22:0,93,1365	0/0:8,0:8:12.04:0,12,187	0/0:46,0:38:38.75:0,39,482	0/0:49,0:37:39.05:0,39,501	1/1:9,14:22:33.11:786,33,0	0/0:22,0:22:54.17:0,54,840	0/0:25,0:25:51.14:0,51,771	1/1:31,26:62:77.86:1452,78,0	0/0:22,0:22:42.13:0,42,652	1/1:7,12:20:42.10:881,42,0	1/1:7,16:25:33.11:796,33,0	1/1:3,13:17:24.55:580,25,0	1/1:4,28:32:69.17:1664,69,0	1/1:6,16:23:30.10:724,30,0	1/1:13,27:41:17.80:1473,18,0	1/1:7,22:29:57.20:1377,57,0	0/0:37,0:37:78.11:0,78,1092	1/1:5,9:17:21.07:495,21,0	0/0:20,0:20:33.07:0,33,482	0/0:31,0:31:69.22:0,69,1078	1/1:10,23:35:51.18:1232,51,0	1/1:8,16:25:29.98:724,30,0	1/1:4,13:17:27.09:648,27,0	1/1:9,20:29:54.19:1282,54,0	0/0:21,0:21:36.12:0,36,580	1/1:13,16:29:45.14:1039,45,0	1/1:5,21:26:44.76:1086,45,0	1/1:4,4:8:11.28:118,11,0
chr10	7864071	.	A	AG	28911.29	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-10.356;DP=716;FS=0.000;HRun=1;HaplotypeScore=63.0617;InbreedingCoeff=0.9837;MQ=90.51;MQ0=0;MQRankSum=-11.976;QD=43.80;ReadPosRankSum=6.671;VQSLOD=3.9598;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,41:44:99:1918,120,0	1/1:0,5:5:12.04:192,12,0	0/0:25,0:25:66.21:0,66,898	0/0:31,0:31:90.25:0,90,1174	1/1:2,33:35:90.31:1439,90,0	1/1:1,26:26:72.25:1151,72,0	1/1:0,20:20:51.17:816,51,0	1/1:1,24:25:72.23:1125,72,0	1/1:0,33:33:96.33:1534,96,0	1/1:0,33:33:99:1574,99,0	1/1:0,11:11:33.11:528,33,0	1/1:1,42:43:99:1727,108,0	1/1:1,28:29:84.29:1329,84,0	1/1:0,27:27:78.27:1247,78,0	1/1:1,38:39:99:1726,108,0	1/1:0,27:27:75.26:1199,75,0	1/1:0,17:17:45.15:719,45,0	1/1:1,10:11:30.10:480,30,0	1/1:2,27:29:87.30:1389,87,0	1/1:1,20:21:54.18:863,54,0	1/1:0,22:22:60.20:959,60,0	1/1:0,22:22:63.21:1006,63,0	1/1:0,26:26:66.22:1055,66,0	1/1:0,23:23:60.20:959,60,0	1/1:1,23:24:60.20:959,60,0	1/1:1,28:29:84.29:1341,84,0	1/1:0,28:28:75.26:1197,75,0	1/1:0,10:10:30.10:479,30,0
chr10	7864407	.	TGA	T	5873.71	PASS	AB=1.000;AC=40;AF=0.714;AN=56;BaseQRankSum=4.619;DP=597;FS=2.062;HRun=0;HaplotypeScore=103.1783;InbreedingCoeff=-0.0275;MQ=78.22;MQ0=6;MQRankSum=-5.017;QD=10.76;ReadPosRankSum=8.840;VQSLOD=4.1273;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:32,0:32:6.75:133,0,7	0/1:7,0:7:3.31:21,0,3	0/0:29,0:25:64.92:0,65,871	0/0:22,0:20:44.45:0,44,569	0/1:32,0:32:49.07:163,0,49	0/1:25,0:24:28.32:92,0,28	1/1:22,0:22:11.90:101,12,0	0/1:35,0:35:81.68:82,0,82	1/1:19,0:19:16.71:106,17,0	1/1:6,14:20:41.99:485,42,0	1/1:8,15:23:41.98:482,42,0	1/1:3,21:23:50.76:666,51,0	1/1:3,16:17:33.10:438,33,0	1/1:1,16:16:42.14:576,42,0	0/1:31,0:31:18.35:103,0,18	0/1:24,0:24:10.83:77,0,11	0/1:16,0:16:53.15:53,0,65	1/1:2,16:18:39.09:514,39,0	0/1:14,0:14:28.16:44,0,28	1/1:21,0:20:16.52:126,17,0	0/1:19,0:19:4.59:71,0,5	1/1:2,10:12:24.07:314,24,0	1/1:14,11:25:45.11:568,45,0	1/1:3,13:16:27.09:365,27,0	0/1:27,0:27:24.74:103,0,25	0/1:29,0:29:69.01:69,0,75	1/1:17,0:17:12.05:100,12,0	1/1:2,0:2:4.87:18,5,0
chr10	7864411	.	AGAG	A	872.67	PASS	AB=1.000;AC=16;AF=0.286;AN=56;BaseQRankSum=1.910;DP=582;FS=10.960;HRun=0;HaplotypeScore=130.6384;InbreedingCoeff=0.7720;MQ=77.66;MQ0=6;MQRankSum=-3.230;QD=5.59;ReadPosRankSum=3.886;VQSLOD=1.8558;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:63.86:0,64,276	0/0:8,0:8:13.08:0,13,64	0/0:30,0:26:68.35:0,68,1141	0/0:19,0:17:44.72:0,45,741	0/0:31,0:31:75.07:0,75,366	0/0:26,0:25:46.52:0,47,215	0/0:23,0:23:40.32:0,40,183	0/0:38,0:38:89.51:0,90,433	0/0:20,0:20:40.51:0,41,164	1/1:15,1:16:6.22:179,6,0	1/1:17,2:19:9.47:170,9,0	1/1:22,0:21:36.38:145,36,0	1/1:18,1:17:26.72:133,27,0	0/1:19,0:18:26.15:74,0,26	0/0:27,0:27:56.40:0,56,267	0/0:25,0:25:43.43:0,43,193	0/0:17,0:17:26.36:0,26,184	0/1:19,0:19:27.70:79,0,28	0/0:14,0:14:32.84:0,33,148	0/0:23,0:22:42.56:0,43,172	0/0:19,0:19:38.44:0,38,174	1/1:11,1:12:19.73:109,20,0	1/1:17,0:17:24.25:112,24,0	1/1:13,0:13:20.22:67,20,0	0/0:26,0:26:56.51:0,57,257	0/0:26,0:26:66.84:0,67,360	0/0:19,0:19:37.66:0,38,155	0/0:2,0:2:4.99:0,5,19
chr10	7864413	.	AGG	A	10044.74	PASS	AB=1.000;AC=48;AF=0.857;AN=56;BaseQRankSum=-1.708;DP=581;FS=0.565;HRun=10;HaplotypeScore=88.0523;InbreedingCoeff=0.3695;MQ=78.38;MQ0=6;MQRankSum=-3.950;QD=18.95;ReadPosRankSum=8.197;VQSLOD=2.9482;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,27:30:66.17:735,66,0	1/1:0,7:8:5.95:124,6,0	0/0:31,0:27:47.98:0,48,631	0/0:20,0:18:33:0,33,428	1/1:6,25:31:72.17:798,72,0	1/1:4,23:26:45.11:501,45,0	1/1:1,22:23:45.11:501,45,0	1/1:5,31:36:93.14:976,93,0	1/1:0,19:19:45.12:501,45,0	1/1:15,0:15:16.01:119,16,0	1/1:18,0:18:7.91:124,8,0	1/1:23,0:22:6.46:204,6,0	1/1:17,0:15:31.27:159,31,0	0/1:23,0:22:99:147,0,102	1/1:2,23:25:57.14:635,57,0	1/1:1,23:24:45.12:502,45,0	1/1:4,12:17:35.83:380,36,0	0/1:21,0:21:48.64:133,0,49	1/1:2,12:14:36.07:386,36,0	1/1:1,21:21:48.12:535,48,0	1/1:1,18:20:33.03:426,33,0	1/1:12,0:12:22.69:120,23,0	0/1:18,0:18:7.13:133,0,7	0/1:15,0:15:18.25:100,0,18	1/1:3,21:24:57.15:635,57,0	1/1:3,22:26:54.01:636,54,0	1/1:1,18:19:42.09:468,42,0	1/1:0,3:3:6.02:67,6,0
chr10	7867333	.	GC	G	16054.42	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=16.008;DP=678;FS=3.469;HRun=2;HaplotypeScore=83.7192;InbreedingCoeff=0.9974;MQ=74.77;MQ0=0;MQRankSum=-1.867;QD=34.90;ReadPosRankSum=1.546;VQSLOD=5.2827;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,28:29:78.25:1013,78,0	0/0:18,0:18:54.17:0,54,787	0/0:10,0:10:25.30:0,25,323	0/0:16,0:16:45.15:0,45,672	1/1:1,21:22:52.16:733,52,0	0/0:28,0:28:84.28:0,84,1256	0/0:21,0:21:63.20:0,63,923	1/1:1,42:43:99:1519,120,0	0/0:23,0:23:69.22:0,69,1014	1/1:0,28:28:84.26:1076,84,0	1/1:0,25:25:75.24:974,75,0	1/1:0,26:26:72.23:935,72,0	1/1:1,18:19:54.18:701,54,0	1/1:0,30:30:81.26:1052,81,0	1/1:0,34:34:90.29:1169,90,0	1/1:0,22:22:57.19:740,57,0	0/0:28,0:28:84.28:0,84,1259	1/1:1,23:24:66.19:841,66,0	0/0:18,0:18:51.15:0,51,725	0/0:28,0:28:81.27:0,81,1212	1/1:1,23:24:57.19:740,57,0	1/1:1,27:28:78.14:973,78,0	1/1:0,25:25:66.16:857,66,0	1/1:0,23:23:60.20:779,60,0	0/0:28,0:28:81.22:0,81,1136	1/1:2,23:25:66.18:827,66,0	1/1:1,26:27:72.23:932,72,0	1/1:0,6:6:15.05:195,15,0
chr10	7868336	.	GGA	G	17484.63	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=10.934;DP=747;FS=3.821;HRun=0;HaplotypeScore=107.4156;InbreedingCoeff=0.9697;MQ=70.47;MQ0=4;MQRankSum=-0.019;QD=36.81;ReadPosRankSum=4.899;VQSLOD=7.0669;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,45:49:99:1915,107,0	0/0:13,0:13:30.10:0,30,534	0/0:31,0:28:53.86:0,54,1078	0/0:49,0:43:95.26:0,95,1584	1/1:1,26:27:69.23:966,69,0	0/0:26,0:26:72.23:0,72,1266	0/0:37,0:37:99:0,105,1827	1/1:3,21:24:63.15:827,63,0	0/0:32,0:31:93.32:0,93,1673	1/1:0,26:26:78.25:1076,78,0	1/1:0,16:16:33.09:462,33,0	1/1:2,30:32:90.30:1260,90,0	1/1:3,23:26:63.21:882,63,0	1/1:2,36:38:99:1429,102,0	1/1:0,29:29:81.27:1134,81,0	1/1:1,27:27:75.25:1050,75,0	0/0:29,0:29:84.29:0,84,1512	1/1:1,18:19:12.20:672,12,0	0/0:17,0:17:39.13:0,39,703	0/0:19,0:18:57.18:0,57,997	1/1:4,26:29:66.22:924,66,0	1/1:1,22:23:60.20:833,60,0	1/1:1,11:12:30.10:420,30,0	1/1:2,38:40:99:1513,108,0	0/0:18,0:18:51.17:0,51,919	1/1:1,31:32:93.30:1283,93,0	1/1:1,20:21:57.19:798,57,0	1/1:0,1:1:3.01:42,3,0
chr10	7868553	.	AATGGGAGGAGAGACAGGGG	A	2700.49	PASS	AB=0.968;AC=20;AF=0.417;AN=48;BaseQRankSum=0.578;DP=620;FS=5.245;HRun=0;HaplotypeScore=272.0751;InbreedingCoeff=0.0664;MQ=54.45;MQ0=37;MQRankSum=0.063;QD=8.49;ReadPosRankSum=7.351;VQSLOD=1.5652;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:26:35.72:89,0,36	0/0:15,0:14:3.01:0,3,43	./.	0/0:38,0:12:6.01:0,6,65	0/1:7,6:13:2.30:80,0,2	0/0:28,0:28:27.08:0,27,1119	0/0:35,0:35:48.13:0,48,1231	./.	0/0:29,0:29:48.15:0,48,1538	0/1:21,0:18:50.96:184,0,51	1/1:14,0:14:3.01:54,3,0	0/1:15,0:14:35.70:36,0,40	1/1:20,0:20:12.04:274,12,0	1/1:20,0:18:12.03:208,12,0	1/1:31,0:31:24.48:689,24,0	0/1:22,0:21:99:306,0,100	0/0:26,0:26:33.09:0,33,1378	0/1:8,0:8:99:106,0,327	0/0:18,0:15:3.01:0,3,115	0/0:13,0:12:18.05:0,18,478	0/1:44,0:35:38.28:128,0,38	0/1:22,0:21:26.47:243,0,26	./.	0/1:26,0:25:99:163,0,281	0/0:20,0:20:21.06:0,21,581	1/1:18,0:18:11.95:157,12,0	0/1:15,0:14:14.76:144,0,15	./.
chr10	7868593	.	TG	T	1280.60	PASS	AB=0.841;AC=15;AF=0.268;AN=56;BaseQRankSum=1.849;DP=545;FS=4.184;HRun=3;HaplotypeScore=97.8759;InbreedingCoeff=-0.3840;MQ=44.86;MQ0=41;MQRankSum=-0.196;QD=4.94;ReadPosRankSum=-3.160;VQSLOD=-0.5534;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:25,2:24:77.95:78,0,278	0/0:8,0:8:15.05:0,15,216	0/0:37,0:9:26.30:0,26,327	0/0:29,0:6:15.04:0,15,194	0/1:14,0:13:50.20:50,0,194	0/0:20,0:19:48.15:0,48,673	0/0:31,1:32:87.26:0,87,1200	0/0:41,0:25:69.21:0,69,959	0/0:25,0:25:69.20:0,69,952	0/1:16,3:19:57.35:57,0,594	0/1:9,2:9:16.05:16,0,237	0/1:11,1:11:6.97:7,0,357	0/1:12,3:13:99:113,0,268	0/1:8,4:10:99:112,0,148	0/1:16,7:21:99:307,0,357	0/1:12,6:16:99:206,0,230	0/0:23,0:23:66.19:0,66,924	0/1:8,2:10:49.38:49,0,236	0/0:19,0:17:45.15:0,45,644	0/0:23,0:23:60.19:0,60,844	0/1:32,5:29:91.34:91,0,482	0/1:5,4:9:99:126,0,108	0/0:3,0:2:3.01:0,3,43	0/1:19,6:22:66.85:67,0,270	0/0:22,0:21:54.17:0,54,754	0/1:14,1:12:85.31:85,0,266	0/1:9,3:9:70.16:70,0,192	0/0:4,0:4:3.01:0,3,43
chr10	7868717	.	CG	C	850.20	PASS	AB=0.982;AC=15;AF=0.278;AN=54;BaseQRankSum=6.137;DP=556;FS=14.029;HRun=5;HaplotypeScore=148.4853;InbreedingCoeff=-0.1997;MQ=50.44;MQ0=27;MQRankSum=-0.923;QD=2.83;ReadPosRankSum=-1.094;VQSLOD=-0.5159;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,15:23:5.36:448,5,0	0/0:14,0:12:33.06:0,33,401	./.	0/1:20,0:7:0.56:1,0,111	0/0:15,0:15:2.95:0,3,382	0/0:15,0:15:36.05:0,36,425	0/0:25,0:25:57.14:0,57,742	0/0:15,2:10:30.10:0,30,410	0/0:22,0:22:57.15:0,57,730	0/1:29,1:26:7.27:7,0,647	0/0:12,0:10:15.02:0,15,186	0/1:26,0:23:85:85,0,442	0/1:21,0:18:54.91:55,0,447	0/1:15,1:15:4.33:4,0,283	0/1:33,1:27:6.82:7,0,635	0/1:20,0:21:40.63:41,0,580	0/0:32,0:32:82.15:0,82,1095	0/1:8,0:8:51.88:52,0,108	0/0:14,0:13:30.10:0,30,410	0/0:13,0:11:24.05:0,24,296	0/1:34,0:28:59.57:60,0,388	0/1:6,1:6:67.01:86,0,67	0/1:15,0:13:9.39:9,0,263	0/1:26,0:24:88.74:89,0,383	0/0:23,0:23:51.11:0,51,620	0/0:13,1:14:39.12:0,39,519	0/0:22,0:17:32.78:0,33,419	0/1:5,0:5:54.88:55,0,70
chr10	7868735	.	CA	C	4089.72	PASS	AB=0.569;AC=14;AF=0.250;AN=56;BaseQRankSum=-12.259;DP=597;FS=7.029;HRun=1;HaplotypeScore=142.0205;InbreedingCoeff=0.7764;MQ=50.29;MQ0=26;MQRankSum=7.294;QD=30.07;ReadPosRankSum=2.216;VQSLOD=3.0442;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:27:66.11:0,66,935	0/1:2,4:6:77.47:149,0,77	0/0:27,0:3:8.96:0,9,90	0/0:23,0:8:17.90:0,18,265	0/0:17,0:17:30.10:0,30,478	1/1:1,12:13:24.08:334,24,0	1/1:4,21:25:38.74:695,39,0	0/0:28,0:20:57.17:0,57,882	1/1:0,15:15:36.12:501,36,0	0/0:34,0:30:90.29:0,90,1411	0/0:16,0:15:20.14:0,20,334	0/0:24,0:22:51.12:0,51,749	0/0:18,0:17:39.05:0,39,526	0/0:22,0:20:39.13:0,39,621	0/0:29,0:24:48.16:0,48,765	0/0:23,0:22:54.14:0,54,830	1/1:0,29:29:81.27:1127,81,0	0/0:10,0:8:11.99:0,12,156	0/1:2,12:11:17.93:301,0,18	1/1:0,14:14:24.04:313,24,0	0/0:40,0:33:44.85:0,45,702	0/0:13,0:13:30.09:0,30,446	0/0:16,0:15:33.11:0,33,524	0/0:33,0:30:61.95:0,62,899	1/1:0,20:20:48.14:669,48,0	0/0:24,0:22:63.21:0,63,1006	0/0:29,0:24:48.02:0,48,756	0/0:6,0:6:6.02:0,6,96
chr10	7868791	.	CG	C	5640.87	PASS	AB=0.673;AC=21;AF=0.375;AN=56;BaseQRankSum=6.249;DP=745;FS=18.460;HRun=5;HaplotypeScore=137.2947;InbreedingCoeff=-0.1536;MQ=46.13;MQ0=34;MQRankSum=-3.604;QD=10.83;ReadPosRankSum=4.623;VQSLOD=2.0760;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:19,25:37:79.64:970,80,0	0/0:8,0:8:18.05:0,18,227	0/0:29,0:5:12.01:0,12,129	0/0:24,0:4:12.03:0,12,138	0/1:5,12:13:50.83:86,0,51	0/0:25,0:24:51.15:0,51,666	0/0:35,0:35:87.19:0,87,1145	0/1:8,9:9:39.53:55,0,40	0/0:19,0:19:48.13:0,48,611	0/1:20,9:27:99:311,0,232	0/1:18,0:17:21.43:21,0,111	0/1:9,14:27:73.04:179,0,73	1/1:14,14:24:66.18:741,66,0	0/1:10,22:32:99:351,0,105	0/1:5,22:29:59.08:112,0,59	0/1:12,31:40:23.90:552,0,24	0/0:28,0:28:78.23:0,78,1035	0/1:7,9:15:64.86:117,0,65	0/0:17,0:12:36.04:0,36,439	0/0:19,0:18:27.08:0,27,354	0/1:12,35:41:34.27:185,0,34	0/1:14,14:26:90.29:235,0,90	0/1:13,5:19:70.82:267,0,71	1/1:24,12:39:13.47:680,13,0	0/0:16,0:15:33.09:0,33,421	0/1:11,18:25:99:380,0,154	0/1:13,18:27:99:340,0,153	0/1:4,5:9:31.93:58,0,32
chr10	7868796	.	GT	G	1892.72	PASS	AB=0.970;AC=19;AF=0.339;AN=56;BaseQRankSum=10.536;DP=740;FS=7.984;HRun=1;HaplotypeScore=139.6418;InbreedingCoeff=-0.1900;MQ=47.89;MQ0=31;MQRankSum=-3.339;QD=3.86;ReadPosRankSum=7.755;VQSLOD=-0.0481;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:37,2:33:68.98:359,69,0	0/0:7,0:7:18.06:0,18,248	0/0:30,0:6:17.86:0,18,199	0/0:28,1:6:12.03:0,12,148	0/1:22,0:16:24.16:24,0,54	0/0:27,0:26:57.07:0,57,778	0/0:35,0:35:84.22:0,84,1235	0/1:17,0:11:2.67:3,0,104	0/0:18,0:17:39.13:0,39,595	0/1:29,0:25:29.42:29,0,316	0/0:20,0:19:5.92:0,6,154	0/1:25,1:25:93.56:94,0,98	1/1:27,0:23:60.62:347,61,0	0/1:32,2:32:97.66:163,0,98	0/1:31,0:30:26.35:26,0,115	0/1:38,2:36:18.01:267,0,18	0/0:31,0:31:87.18:0,87,1189	0/1:16,0:15:31.96:32,0,102	0/0:18,0:12:33.04:0,33,472	0/0:18,0:17:38.98:0,39,490	0/1:51,0:45:45.71:46,0,124	0/1:27,2:26:79.99:80,0,149	0/1:18,1:17:62.43:71,0,62	0/1:42,1:40:99:237,0,111	0/0:17,0:15:36.05:0,36,470	0/1:29,0:25:99:108,0,207	0/1:27,2:24:95.81:143,0,96	0/1:7,1:8:34.81:35,0,37
chr10	7868959	.	C	CAG	13935.11	PASS	AB=0.539;AC=31;AF=0.554;AN=56;BaseQRankSum=-5.618;DP=609;FS=2.554;HRun=0;HaplotypeScore=108.7281;InbreedingCoeff=0.5720;MQ=61.03;MQ0=6;MQRankSum=0.074;QD=36.38;ReadPosRankSum=1.445;VQSLOD=6.6299;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,22:20:45.15:913,45,0	0/0:8,0:8:15.05:0,15,241	0/0:39,0:32:26.34:0,26,786	0/0:31,0:21:33.09:0,33,471	1/1:2,10:13:9.50:166,10,0	0/0:18,0:20:45.24:0,45,717	0/0:26,0:26:78.21:0,78,1193	1/1:5,20:18:50.74:900,51,0	0/0:28,0:28:75.20:0,75,1151	0/1:1,11:11:12.63:542,0,13	1/1:3,3:6:12.03:204,12,0	0/1:4,25:29:36.24:975,0,36	1/1:2,21:21:9.08:987,9,0	1/1:2,23:24:5.16:915,5,0	1/1:2,24:27:5.55:927,6,0	0/1:3,29:30:14.85:1380,0,15	0/0:28,0:28:72.24:0,72,1172	0/1:2,9:11:15.83:519,0,16	0/0:17,0:17:51.12:0,51,778	0/0:14,0:14:36.11:0,36,554	1/1:11,29:40:83.52:1710,84,0	1/1:4,13:14:30.03:566,30,0	1/1:1,5:7:6.02:121,6,0	1/1:4,28:33:32.06:1302,32,0	0/0:14,0:14:36.12:0,36,585	0/1:4,10:16:46.80:552,0,47	1/1:0,24:24:54.19:1095,54,0	1/1:1,6:8:9.03:162,9,0
chr10	7872428	.	G	GT	3536.09	PASS	AB=0.542;AC=15;AF=0.268;AN=56;BaseQRankSum=-11.614;DP=639;FS=9.396;HRun=10;HaplotypeScore=64.3750;InbreedingCoeff=0.9356;MQ=77.76;MQ0=0;MQRankSum=0.822;QD=22.38;ReadPosRankSum=-0.049;VQSLOD=4.1937;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:54.04:0,54,693	1/1:3,11:14:32.03:350,32,0	0/0:17,0:20:33.91:0,34,247	0/0:10,0:10:8.98:0,9,74	0/0:32,0:32:79.93:0,80,660	1/1:3,20:23:54.14:576,54,0	1/1:3,22:25:14.45:359,14,0	0/0:26,0:26:42.77:0,43,360	0/1:2,11:13:0.58:200,0,1	0/0:28,0:28:65.69:0,66,529	0/0:27,0:27:68.90:0,69,566	0/0:14,0:14:38.94:0,39,320	0/0:28,0:28:74.91:0,75,616	0/0:30,0:30:71.88:0,72,591	0/0:22,0:23:61.91:0,62,493	0/0:26,0:26:65.89:0,66,541	1/1:1,14:15:33.08:352,33,0	0/0:18,1:19:15.95:0,16,332	1/1:2,21:24:53.25:583,53,0	1/1:3,25:28:75.08:764,75,0	0/0:15,0:15:32.94:0,33,270	0/0:30,1:31:36.04:0,36,483	0/0:33,0:33:71.85:0,72,590	0/0:21,0:21:51.81:0,52,420	1/1:1,15:16:33.08:352,33,0	0/0:20,0:21:43.95:0,44,351	0/0:32,0:32:74.88:0,75,616	0/0:9,0:9:17.98:0,18,148
chr10	7872963	.	CTTTTCT	C	17319.85	PASS	AB=0.929;AC=53;AF=0.946;AN=56;BaseQRankSum=-1.243;DP=592;FS=1.369;HRun=0;HaplotypeScore=143.9315;InbreedingCoeff=0.4858;MQ=61.95;MQ0=2;MQRankSum=-3.568;QD=30.02;ReadPosRankSum=3.046;VQSLOD=4.8899;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,13:15:6.02:95,6,0	1/1:3,5:8:11.89:160,12,0	0/0:15,0:12:7.65:0,8,98	0/1:23,0:17:6.71:7,0,216	1/1:6,24:30:53.67:989,54,0	1/1:6,17:23:33.03:644,33,0	1/1:6,11:17:29.89:577,30,0	1/1:16,21:37:63.16:1053,63,0	1/1:5,12:17:24.08:502,24,0	1/1:6,22:28:63.22:1301,63,0	1/1:9,24:33:69.22:1277,69,0	1/1:3,18:21:39.13:816,39,0	1/1:4,8:12:15.05:313,15,0	1/1:7,14:21:33.11:690,33,0	1/1:4,11:15:24.08:502,24,0	1/1:3,13:16:24.03:458,24,0	1/1:13,6:19:12.04:251,12,0	1/1:8,3:11:18.04:311,18,0	1/1:15,16:31:48.08:867,48,0	1/1:10,22:32:57.19:1139,57,0	1/1:2,6:8:8.21:174,8,0	1/1:5,17:22:42.14:791,42,0	1/1:3,25:28:47.33:971,47,0	1/1:5,8:13:6.02:125,6,0	1/1:6,12:18:27.09:553,27,0	1/1:6,22:28:66.22:1337,66,0	1/1:6,21:27:42.14:878,42,0	1/1:10,11:21:5.99:538,6,0
chr10	7874996	.	TGC	T	792.65	PASS	AC=30;AF=0.882;AN=34;BaseQRankSum=-1.408;DP=193;FS=0.000;HRun=0;HaplotypeScore=22.4772;InbreedingCoeff=0.2021;MQ=31.93;MQ0=75;MQRankSum=-1.625;QD=5.28;ReadPosRankSum=1.300;VQSLOD=1.7279;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,9:6:13.94:137,14,0	./.	1/1:1,0:1:2.98:21,3,0	0/0:1,0:1:2.80:0,3,13	./.	1/1:4,0:1:3:28,3,0	./.	./.	1/1:20,0:6:3:28,3,0	./.	./.	1/1:10,1:4:12.01:111,12,0	1/1:15,0:8:18.03:171,18,0	1/1:16,0:8:3:28,3,0	1/1:14,0:6:3:28,3,0	1/1:13,0:9:9.01:83,9,0	./.	1/1:10,0:6:3:25,3,0	1/1:3,1:1:3.01:44,3,0	./.	1/1:3,8:3:1.25:3,1,0	0/0:1,1:1:0:0,0,0	./.	1/1:7,4:4:6.02:88,6,0	./.	1/1:1,0:1:3:26,3,0	1/1:7,0:5:5.84:55,6,0	./.
chr10	7874997	.	GCC	G	1218.93	PASS	AC=30;AF=0.882;AN=34;BaseQRankSum=-1.223;DP=164;FS=0.000;HRun=3;HaplotypeScore=20.1103;InbreedingCoeff=0.2040;MQ=34.62;MQ0=48;MQRankSum=-1.733;QD=9.23;ReadPosRankSum=1.121;VQSLOD=0.3769;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,1:6:15.19:158,15,0	./.	1/1:1,0:1:3.01:46,3,0	0/0:1,0:1:2.80:0,3,13	./.	1/1:1,1:1:3.01:46,3,0	./.	./.	1/1:4,10:6:3.01:46,3,0	./.	./.	1/1:4,5:4:12.04:183,12,0	1/1:5,10:8:18.06:275,18,0	1/1:6,8:8:3.01:46,3,0	1/1:4,9:6:3.01:46,3,0	1/1:4,8:9:9.03:137,9,0	./.	1/1:1,9:6:3.01:46,3,0	1/1:4,0:1:3.01:44,3,0	./.	1/1:8,2:3:1.25:3,1,0	0/0:2,0:1:0:0,0,0	./.	1/1:6,2:4:6.91:90,7,0	./.	1/1:0,1:1:3.01:46,3,0	1/1:3,4:5:6.02:92,6,0	./.
chr10	7875237	.	TGTGATACTGATTCTCTCCCTG	T	380.63	PASS	AB=1.000;AC=16;AF=0.667;AN=24;BaseQRankSum=2.097;DP=485;FS=6.329;HRun=0;HaplotypeScore=66.3863;InbreedingCoeff=0.1589;MQ=21.24;MQ0=208;MQRankSum=-1.554;QD=1.74;ReadPosRankSum=-1.456;VQSLOD=0.7609;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:43,0:34:43.26:43,0,275	./.	./.	./.	./.	1/1:14,0:8:6.02:68,6,0	0/1:23,0:9:0:0,0,0	./.	./.	1/1:7,0:4:6.02:94,6,0	0/1:7,0:5:0:0,0,0	0/1:21,0:10:42.98:51,0,43	./.	1/1:14,0:7:5.93:40,6,0	1/1:23,0:10:5.95:42,6,0	./.	./.	./.	./.	0/0:14,8:15:2.90:0,3,16	1/1:45,0:21:6.91:97,7,0	./.	0/0:11,0:4:3.01:0,3,36	1/1:22,0:12:3.01:40,3,0	./.	./.	./.	./.
chr10	7875466	.	TG	T	606.85	PASS	AC=2;AF=0.037;AN=54;BaseQRankSum=-5.390;DP=461;FS=0.000;HRun=2;HaplotypeScore=51.7201;InbreedingCoeff=0.6148;MQ=35.47;MQ0=126;MQRankSum=3.216;QD=25.29;ReadPosRankSum=1.232;VQSLOD=3.3055;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,22:22:54.18:701,54,0	0/0:4,0:3:9:0,9,85	0/0:30,0:1:3.01:0,3,40	./.	0/0:8,0:6:14.98:0,15,127	0/0:12,0:11:12.02:0,12,117	0/0:18,0:11:18:0,18,160	0/0:22,0:9:23.91:0,24,197	0/0:8,0:7:11.94:0,12,102	0/0:15,0:8:17.94:0,18,153	0/0:9,0:7:8.94:0,9,67	0/0:15,0:13:18:0,18,163	0/0:12,0:12:20.99:0,21,198	0/0:16,0:15:24.05:0,24,237	0/0:13,0:12:15.03:0,15,146	0/0:7,0:7:17.96:0,18,161	0/0:20,0:15:26.98:0,27,236	0/0:9,1:7:9:0,9,82	0/0:23,0:9:26.91:0,27,214	0/0:16,0:15:26.93:0,27,218	0/0:34,0:27:53.87:0,54,437	0/0:10,0:8:17.96:0,18,154	0/0:9,0:6:12.02:0,12,120	0/0:29,0:27:32.92:0,33,266	0/0:23,0:19:53.91:0,54,473	0/0:16,0:12:35.86:0,36,283	0/0:10,0:9:17.98:0,18,160	0/0:6,0:5:8.98:0,9,72
chr10	7875635	.	AT	A	8031.35	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-2.302;DP=362;FS=7.030;HRun=8;HaplotypeScore=40.8580;InbreedingCoeff=0.8976;MQ=82.10;MQ0=0;MQRankSum=-7.642;QD=23.83;ReadPosRankSum=4.326;VQSLOD=5.0130;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,10:12:18.02:174,18,0	1/1:0,10:10:27.04:261,27,0	0/0:13,0:13:33.55:0,34,380	0/0:12,0:12:29.92:0,30,333	1/1:0,14:14:36.05:347,36,0	1/1:0,12:12:30.05:290,30,0	1/1:1,8:9:21.02:203,21,0	1/1:4,20:24:60.08:579,60,0	1/1:0,13:13:33.05:319,33,0	1/1:2,12:12:30.03:285,30,0	1/1:2,12:14:36.06:348,36,0	1/1:2,10:12:30.04:290,30,0	1/1:1,11:12:33.05:319,33,0	1/1:1,8:9:21.03:203,21,0	1/1:2,12:14:33.05:319,33,0	1/1:1,15:16:42.07:405,42,0	1/1:2,16:17:39.05:377,39,0	1/1:0,13:13:36.06:348,36,0	1/1:1,9:10:27.04:261,27,0	1/1:0,9:9:27.04:261,27,0	1/1:1,12:13:33.05:319,33,0	1/1:0,8:8:21.03:203,21,0	1/1:1,13:14:33.05:319,33,0	1/1:1,5:6:15.02:145,15,0	1/1:0,17:17:45.07:435,45,0	1/1:1,20:21:60.05:564,60,0	1/1:3,18:21:45.06:434,45,0	1/1:0,2:1:3:29,3,0
chr10	7876389	.	ACACACACACAC	A	2077.39	PASS	AB=0.981;AC=18;AF=0.346;AN=52;BaseQRankSum=6.371;DP=1020;FS=9.826;HRun=0;HaplotypeScore=356.9332;InbreedingCoeff=-0.1770;MQ=31.95;MQ0=85;MQRankSum=-4.698;QD=3.59;ReadPosRankSum=-5.517;VQSLOD=0.3869;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:37:20.67:0,21,948	0/1:14,1:14:4.91:173,0,5	./.	0/0:71,0:12:12.03:0,12,146	0/0:20,0:18:9.38:0,9,271	1/1:32,2:31:39.98:502,40,0	0/1:46,0:39:5.90:145,0,6	0/0:78,0:48:42.15:0,42,597	0/1:28,0:28:64.97:354,0,65	0/0:32,0:24:46.19:0,46,940	0/1:22,0:20:19.29:19,0,190	0/1:37,0:35:54.36:54,0,753	0/0:21,0:16:3.20:0,3,250	0/0:23,0:18:8.11:0,8,162	0/1:27,0:24:0.68:1,0,398	0/1:17,0:16:24.04:24,0,467	0/1:25,0:24:83.35:210,0,83	0/0:33,0:28:28.25:0,28,950	0/1:29,0:21:90.23:177,0,90	1/1:19,3:18:8.71:207,9,0	0/1:147,0:114:99:109,0,1008	0/1:28,0:25:64.32:65,0,64	0/0:12,0:12:1.93:0,2,213	0/1:47,0:41:19.87:20,0,641	0/1:19,2:19:19.93:161,0,20	0/0:46,0:39:56.42:0,56,1223	0/1:27,0:24:11.83:12,0,474	./.
chr10	7876391	.	ACACACACAC	A	2305.71	PASS	AB=0.956;AC=24;AF=0.462;AN=52;BaseQRankSum=2.871;DP=1014;FS=9.029;HRun=0;HaplotypeScore=338.5276;InbreedingCoeff=-0.1812;MQ=31.50;MQ0=89;MQRankSum=-3.486;QD=3.49;ReadPosRankSum=-6.241;VQSLOD=0.2585;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:37:23.95:0,24,710	0/1:14,2:14:2.08:169,0,2	./.	0/0:69,0:11:9.03:0,9,110	0/1:20,0:18:7.89:8,0,142	1/1:28,6:31:38.71:460,39,0	1/1:44,1:38:15.51:175,16,0	0/0:78,0:48:31.22:0,31,366	1/1:27,2:28:4.60:478,5,0	0/0:31,0:24:28.87:0,29,664	0/1:22,0:20:20.49:20,0,120	0/1:35,0:34:87.60:88,0,386	0/1:19,0:14:8.29:8,0,156	0/1:23,0:18:7.32:7,0,76	0/1:25,0:24:18.70:19,0,146	0/1:18,0:16:39.10:39,0,285	0/1:23,2:24:74.01:222,0,74	0/1:32,0:28:4.16:4,0,507	0/1:29,0:22:91.39:178,0,91	1/1:17,5:18:12.39:186,12,0	0/1:143,0:115:99:140,0,648	0/1:26,0:25:38.53:80,0,39	0/1:13,0:13:1.92:2,0,130	0/1:41,0:39:38.29:38,0,416	0/1:15,6:19:12.47:143,0,12	0/0:46,0:39:48.44:0,48,784	0/0:24,0:20:3.73:0,4,320	./.
chr10	7876400	.	C	CCA	6700.65	PASS	AB=0.966;AC=40;AF=0.769;AN=52;BaseQRankSum=-4.403;DP=994;FS=65.787;HRun=0;HaplotypeScore=302.8993;InbreedingCoeff=-0.0481;MQ=30.21;MQ0=97;MQRankSum=0.897;QD=7.85;ReadPosRankSum=0.622;VQSLOD=2.2224;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:31,5:29:3.46:242,0,3	1/1:16,0:14:18.42:185,18,0	./.	0/0:78,0:8:14.85:0,15,155	1/1:17,0:15:8.73:112,9,0	1/1:30,0:29:37.37:384,37,0	1/1:43,0:37:30.04:399,30,0	0/1:76,0:44:5.96:748,0,6	1/1:26,0:27:36.85:311,37,0	0/1:32,0:22:80.69:386,0,81	0/1:19,0:17:1.38:61,0,1	1/1:33,0:31:34.98:288,35,0	1/1:14,0:11:18.01:153,18,0	1/1:25,1:20:10.22:88,10,0	1/1:26,0:23:25.63:310,26,0	1/1:18,0:19:37.23:345,37,0	0/1:25,2:26:6.13:306,0,6	1/1:29,1:24:0.65:198,1,0	0/1:36,0:28:54.50:253,0,54	1/1:19,0:14:14.97:154,15,0	0/1:142,4:109:79.20:505,0,79	0/1:23,0:20:0.10:93,0,0	1/1:11,0:11:12.33:122,12,0	1/1:42,1:38:7.90:205,8,0	1/1:23,0:21:12.18:120,12,0	0/1:46,0:41:35.76:551,0,36	0/1:20,0:17:4.52:183,0,5	./.
chr10	7876444	.	ACACACACACAC	A	8806.95	PASS	AB=0.954;AC=37;AF=0.685;AN=54;BaseQRankSum=2.146;DP=981;FS=4.909;HRun=0;HaplotypeScore=293.5295;InbreedingCoeff=-0.3603;MQ=24.53;MQ0=180;MQRankSum=-0.859;QD=9.49;ReadPosRankSum=3.415;VQSLOD=3.0481;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:39,0:30:19.63:328,20,0	0/1:25,1:17:11.53:397,0,12	0/0:17,0:1:3.01:0,3,38	./.	0/1:18,3:16:65.79:182,0,66	0/1:34,2:26:23.30:565,0,23	0/1:54,0:35:99:311,0,111	0/1:85,0:42:99:187,0,425	1/1:36,2:25:9.03:543,9,0	0/1:46,2:21:99:637,0,112	1/1:17,5:17:23.32:307,23,0	1/1:33,2:29:30.31:450,30,0	0/1:19,1:9:64.49:131,0,64	0/1:26,2:18:99:342,0,101	0/1:33,2:21:1.64:382,0,2	1/1:16,3:16:18.83:489,19,0	0/1:23,3:21:87.46:743,0,87	0/1:20,1:14:41.27:257,0,41	0/1:41,0:13:99:158,0,111	0/1:20,0:14:83.75:84,0,121	0/1:118,1:80:22.78:264,0,23	1/1:18,1:14:27.03:450,27,0	1/1:16,1:9:6.77:55,7,0	1/1:41,1:32:1.54:61,2,0	1/1:29,2:17:20.88:419,21,0	0/1:48,4:30:99:529,0,157	1/1:20,2:15:3.24:380,3,0	1/1:5,2:3:9.03:155,9,0
chr10	7876450	.	ACACAC	A	3516.93	PASS	AB=0.937;AC=31;AF=0.596;AN=52;BaseQRankSum=1.390;DP=990;FS=3.853;HRun=0;HaplotypeScore=281.0569;InbreedingCoeff=-0.5525;MQ=22.68;MQ0=189;MQRankSum=-0.615;QD=3.71;ReadPosRankSum=-1.524;VQSLOD=2.2340;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:44,0:35:2.35:229,2,0	0/1:29,0:18:63.81:85,0,64	./.	./.	0/1:18,5:16:53.51:54,0,65	0/1:35,0:24:93.78:196,0,94	0/1:57,0:38:15.33:15,0,270	0/1:75,1:41:99:116,0,479	0/1:32,1:20:23.01:138,0,23	0/1:44,3:23:99:315,0,256	1/1:19,3:16:17.35:109,17,0	1/1:27,4:31:11.40:327,11,0	0/1:19,1:10:44.49:44,0,124	0/1:25,3:18:96.01:167,0,96	0/1:28,4:20:32:114,0,32	1/1:17,2:17:7.80:196,8,0	0/1:25,0:20:99:139,0,156	0/1:24,1:16:22.09:214,0,22	0/1:44,0:14:1.76:2,0,112	0/1:19,0:15:63.99:64,0,129	0/1:115,2:78:7.04:233,0,7	1/1:16,3:15:21.12:243,21,0	0/1:14,5:9:0.10:10,0,0	0/1:41,1:33:3.37:3,0,43	0/1:28,0:16:39.05:49,0,39	0/1:51,0:27:99:181,0,159	0/1:20,1:16:1.83:148,0,2	0/1:7,0:4:3.33:127,0,3
chr10	7876452	.	ACAC	A	3030.64	PASS	AB=0.975;AC=29;AF=0.558;AN=52;BaseQRankSum=2.007;DP=968;FS=0.487;HRun=0;HaplotypeScore=273.2245;InbreedingCoeff=-0.4824;MQ=21.10;MQ0=187;MQRankSum=0.756;QD=3.65;ReadPosRankSum=-0.526;VQSLOD=2.2105;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:43,0:34:7.64:219,0,8	0/1:26,2:17:75.74:112,0,76	./.	./.	0/1:23,0:15:39.17:76,0,39	0/1:29,4:22:99:165,0,154	0/0:49,6:37:6.83:0,7,297	0/1:80,0:39:76.95:77,0,398	0/1:31,3:20:62.12:130,0,62	0/1:51,0:23:99:243,0,219	1/1:23,0:16:16.59:104,17,0	1/1:37,0:31:25.39:296,25,0	0/1:21,0:10:31.48:31,0,109	0/1:28,0:18:82.33:133,0,82	0/1:32,0:19:13.05:122,0,13	0/1:19,1:17:2.71:156,0,3	0/1:25,0:20:99:99,0,191	0/1:22,1:16:10.45:207,0,10	0/0:43,0:14:6.73:0,7,176	0/1:16,1:12:63.38:63,0,117	1/1:114,3:75:1.04:190,1,0	1/1:22,0:15:31.12:254,31,0	1/1:21,0:10:1.72:5,2,0	0/1:39,2:32:25.60:26,0,26	0/1:28,1:16:30.18:30,0,93	0/1:52,0:27:99:164,0,128	0/1:23,0:16:5.19:171,0,5	0/1:8,0:4:2.92:104,0,3
chr10	7876534	.	CAT	C	4131.38	PASS	AB=0.979;AC=40;AF=0.714;AN=56;BaseQRankSum=3.659;DP=1082;FS=38.613;HRun=0;HaplotypeScore=228.9469;InbreedingCoeff=-0.2760;MQ=37.40;MQ0=117;MQRankSum=4.941;QD=4.04;ReadPosRankSum=6.508;VQSLOD=1.2928;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:40,1:34:16.35:151,16,0	0/1:17,0:14:38.97:39,0,76	0/0:60,0:1:3.01:0,3,57	0/1:69,0:7:30.96:31,0,115	1/1:32,0:30:11.20:134,11,0	0/1:22,0:21:8.83:96,0,9	0/1:52,1:41:83.96:144,0,84	0/1:79,1:35:58.42:58,0,211	1/1:34,0:28:19.49:195,19,0	0/1:49,0:35:3.02:274,0,3	0/1:18,1:16:11.01:33,0,11	0/1:45,2:39:14.87:192,0,15	1/1:34,0:32:23.45:271,23,0	0/1:35,0:32:32.39:163,0,32	0/1:30,0:26:55.18:76,0,55	1/1:20,0:19:7.03:161,7,0	1/1:36,0:29:48.59:254,49,0	1/1:26,0:23:9.67:116,10,0	1/1:37,0:17:23.67:163,24,0	1/1:24,0:21:0.75:102,1,0	1/1:112,2:79:43.55:376,44,0	1/1:29,0:27:36.78:173,37,0	1/1:23,0:21:28.80:127,29,0	1/1:53,0:50:77.30:417,77,0	0/1:12,0:12:8.64:38,0,9	0/1:46,0:38:85.91:232,0,86	0/1:18,0:17:28.90:87,0,29	0/1:9,0:9:26.49:26,0,44
chr10	7876536	.	TAC	T	11014.80	PASS	AB=0.751;AC=48;AF=0.857;AN=56;BaseQRankSum=-5.280;DP=1055;FS=30.484;HRun=0;HaplotypeScore=194.3731;InbreedingCoeff=0.3078;MQ=37.95;MQ0=107;MQRankSum=6.380;QD=11.90;ReadPosRankSum=4.933;VQSLOD=3.1824;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:27,13:33:10.23:231,10,0	0/1:12,4:12:5.33:98,0,5	0/0:59,0:2:6.02:0,6,92	0/0:68,0:8:16.21:0,16,172	1/1:7,22:27:19.46:454,19,0	1/1:12,11:21:8.26:241,8,0	1/1:40,12:40:1.95:324,2,0	0/1:73,8:36:12.88:152,0,13	1/1:10,21:26:38.60:476,39,0	1/1:24,23:34:66.20:791,66,0	1/1:8,9:15:12.04:147,12,0	1/1:24,23:39:42.11:510,42,0	1/1:12,22:32:24.51:722,25,0	1/1:17,18:31:26.19:483,26,0	1/1:14,18:26:1.37:262,1,0	1/1:4,16:19:38.95:465,39,0	1/1:12,22:28:51.16:622,51,0	1/1:11,15:22:3.25:246,3,0	1/1:22,14:17:39.18:481,39,0	0/1:8,15:21:1.74:364,0,2	1/1:61,50:74:79.51:979,80,0	1/1:13,15:26:38.71:466,39,0	1/1:6,17:21:31.04:364,31,0	1/1:19,35:49:75.19:911,75,0	1/1:6,7:12:11.82:146,12,0	0/1:24,20:37:8.79:642,0,9	1/1:8,10:17:27.08:330,27,0	1/1:9,0:9:9.03:109,9,0
chr10	7877180	.	T	TA	12019.50	PASS	AB=0.715;AC=51;AF=0.911;AN=56;BaseQRankSum=-1.599;DP=659;FS=2.481;HRun=10;HaplotypeScore=117.6070;InbreedingCoeff=0.3542;MQ=67.52;MQ0=0;MQRankSum=-5.429;QD=18.63;ReadPosRankSum=1.659;VQSLOD=4.3536;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:25:41.46:207,41,0	1/1:3,0:11:11.48:61,11,0	0/1:18,0:16:28.66:29,0,94	0/0:13,0:13:19.94:0,20,168	1/1:6,22:28:26:678,26,0	1/1:10,0:16:29.53:158,30,0	1/1:8,0:17:31.86:150,32,0	1/1:9,22:31:63.10:646,63,0	1/1:11,0:20:38.79:199,39,0	1/1:10,30:40:71.56:951,72,0	1/1:8,20:28:69.15:716,69,0	1/1:7,16:23:13.85:545,14,0	1/1:4,18:22:34.32:555,34,0	1/1:4,19:23:60.13:628,60,0	1/1:7,14:21:23.48:455,23,0	0/1:6,13:19:1.17:400,0,1	1/1:14,0:25:51.71:279,52,0	1/1:5,23:28:28.86:698,29,0	1/1:17,0:21:36.19:193,36,0	1/1:22,0:30:46.93:260,47,0	1/1:8,12:21:41.92:421,42,0	1/1:5,18:23:54.14:540,54,0	1/1:8,21:29:69.09:706,69,0	0/1:3,12:16:13.36:259,0,13	1/1:22,0:39:75.68:427,76,0	1/1:3,26:28:56.55:799,57,0	1/1:5,31:37:84.92:1014,85,0	1/1:3,1:5:5.88:46,6,0
chr10	7877236	.	T	TA	15020.81	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-4.278;DP=576;FS=1.569;HRun=7;HaplotypeScore=79.2895;InbreedingCoeff=0.9638;MQ=86.40;MQ0=0;MQRankSum=-8.866;QD=28.23;ReadPosRankSum=5.104;VQSLOD=5.1154;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,15:20:42.13:503,42,0	1/1:2,2:4:9.03:108,9,0	0/0:24,0:24:45.06:0,45,432	0/0:19,0:20:39.01:0,39,363	1/1:6,13:19:39.07:445,39,0	1/1:2,16:18:45.14:544,45,0	1/1:2,26:28:78.24:942,78,0	1/1:3,20:23:54.17:652,54,0	1/1:3,16:19:45.14:544,45,0	1/1:6,21:27:63.19:761,63,0	1/1:3,18:21:51.14:600,51,0	1/1:3,23:26:72.08:838,72,0	1/1:2,24:26:72.22:862,72,0	1/1:1,21:22:57.17:688,57,0	1/1:4,15:19:42.13:507,42,0	1/1:2,18:20:48.15:580,48,0	1/1:3,22:25:63.19:755,63,0	1/1:3,23:26:57.17:688,57,0	1/1:7,18:25:54.17:652,54,0	1/1:7,11:18:36.06:407,36,0	1/1:2,19:21:51.16:616,51,0	1/1:6,7:13:21.48:227,21,0	1/1:4,17:21:45.10:526,45,0	1/1:3,6:9:23.59:258,24,0	1/1:11,18:29:51.16:615,51,0	1/1:3,20:23:63.19:761,63,0	1/1:5,19:24:63.17:737,63,0	1/1:1,5:6:18.05:207,18,0
chr10	7877756	.	A	AC	11231.26	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-0.251;DP=684;FS=1.044;HRun=6;HaplotypeScore=127.2653;InbreedingCoeff=0.9976;MQ=83.82;MQ0=1;MQRankSum=-3.874;QD=28.95;ReadPosRankSum=1.955;VQSLOD=3.5182;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,111,1101	0/0:6,0:6:18.04:0,18,184	0/0:45,0:37:74.52:0,75,689	0/0:50,0:42:31.75:0,32,543	1/1:0,26:26:75.04:882,75,0	0/0:18,0:18:36.07:0,36,364	0/0:18,0:18:48.10:0,48,484	1/1:7,12:20:41.89:425,42,0	0/0:21,0:21:54.08:0,54,532	1/1:2,32:34:96.25:1163,96,0	1/1:0,21:21:54.09:658,54,0	1/1:2,16:18:38.79:464,39,0	1/1:2,21:23:57.16:701,57,0	1/1:2,20:22:48.15:604,48,0	1/1:2,32:34:69.22:868,69,0	1/1:1,22:23:57.18:717,57,0	0/0:28,0:28:69.15:0,69,703	1/1:2,14:16:39.12:490,39,0	0/0:19,0:19:51.10:0,51,514	0/0:19,0:19:54.04:0,54,526	1/1:2,16:18:39.12:488,39,0	1/1:1,20:21:51.16:641,51,0	1/1:2,14:16:38.76:445,39,0	1/1:1,31:32:72.23:905,72,0	0/0:25,0:25:72.04:0,72,703	1/1:3,21:24:57.14:686,57,0	1/1:1,31:32:69.22:868,69,0	1/1:2,6:8:18.06:226,18,0
chr10	7877945	.	CTT	C	11429.49	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=13.577;DP=621;FS=5.503;HRun=9;HaplotypeScore=85.4388;InbreedingCoeff=0.9966;MQ=77.57;MQ0=3;MQRankSum=-3.621;QD=29.61;ReadPosRankSum=4.248;VQSLOD=5.0698;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:93.32:0,93,1523	0/0:5,0:5:15.05:0,15,245	0/0:22,0:22:40.95:0,41,540	0/0:13,0:13:26.57:0,27,307	1/1:2,24:26:66.19:769,66,0	0/0:22,0:22:66.21:0,66,1056	0/0:18,0:18:45.15:0,45,734	1/1:5,16:22:50.86:571,51,0	0/0:18,0:20:44.64:0,45,691	1/1:1,31:32:96.29:1117,96,0	1/1:6,23:29:63.17:733,63,0	1/1:0,22:21:63.19:734,63,0	1/1:0,15:15:36.11:419,36,0	1/1:2,24:26:66.19:769,66,0	1/1:2,26:28:69.20:804,69,0	1/1:4,25:29:75.21:874,75,0	0/0:24,0:24:63.21:0,63,1023	1/1:1,19:20:45.13:524,45,0	0/0:19,0:19:42.14:0,42,684	0/0:41,0:41:99:0,117,1891	1/1:1,16:17:45.13:524,45,0	1/1:1,12:13:36.10:420,36,0	1/1:0,31:30:75.22:874,75,0	1/1:0,11:11:24.07:280,24,0	0/0:16,0:16:39.11:0,39,608	1/1:2,16:18:48.12:548,48,0	1/1:4,36:39:99:1223,105,0	1/1:0,7:7:21.06:245,21,0
chr10	7878625	.	AT	A	9294.82	PASS	AB=0.991;AC=41;AF=0.732;AN=56;BaseQRankSum=9.700;DP=546;FS=0.000;HRun=4;HaplotypeScore=109.1164;InbreedingCoeff=0.3964;MQ=75.57;MQ0=1;MQRankSum=-2.465;QD=19.36;ReadPosRankSum=-1.947;VQSLOD=3.4665;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:36,1:37:41.84:42,0,183	0/1:16,0:16:19.37:19,0,53	0/0:16,1:15:20.51:0,21,325	0/0:15,0:13:16.18:0,16,193	1/1:4,22:27:56.10:656,56,0	0/0:12,0:12:3.92:0,4,68	0/1:9,0:9:3.46:3,0,35	1/1:5,22:27:65.55:689,66,0	0/0:22,0:22:25.40:0,25,124	1/1:0,19:20:59.28:657,59,0	1/1:4,10:14:39.08:433,39,0	1/1:0,15:15:30.09:357,30,0	1/1:1,17:18:36.11:428,36,0	1/1:0,13:14:36.11:429,36,0	1/1:1,22:23:48.15:572,48,0	1/1:0,20:20:45.13:537,45,0	0/1:22,0:22:18.03:18,0,91	1/1:5,18:23:60.07:681,60,0	0/1:24,1:25:4.15:4,0,114	0/1:23,0:23:46.03:46,0,83	1/1:1,18:19:46.37:600,46,0	1/1:2,13:15:42.02:479,42,0	1/1:6,6:13:30.56:273,31,0	1/1:3,15:18:51.09:580,51,0	0/1:24,0:24:20.60:21,0,92	1/1:1,19:20:57.17:677,57,0	1/1:1,28:32:77.40:879,77,0	1/1:0,6:6:18.05:214,18,0
chr10	7878796	.	CAAAA	C	3173.27	PASS	AB=0.688;AC=15;AF=0.268;AN=56;BaseQRankSum=-13.335;DP=559;FS=4.688;HRun=15;HaplotypeScore=145.5064;InbreedingCoeff=0.8996;MQ=58.51;MQ0=20;MQRankSum=0.048;QD=22.04;ReadPosRankSum=0.691;VQSLOD=1.7347;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:40:87.97:0,88,556	1/1:1,10:10:24.08:327,24,0	0/0:23,0:6:11.60:0,12,104	0/0:10,0:7:19.65:0,20,226	0/0:29,0:29:81.07:0,81,888	1/1:5,8:13:20.97:285,21,0	1/1:6,10:16:26.97:368,27,0	0/0:21,0:20:49.29:0,49,475	1/1:5,13:20:25.25:329,25,0	0/0:22,0:21:44.38:0,44,363	0/0:23,0:23:57.15:0,57,657	0/0:20,0:19:45.11:0,45,508	0/0:14,0:14:21.54:0,22,333	0/0:13,0:13:33.08:0,33,370	0/0:24,0:24:54.05:0,54,564	0/0:19,0:17:42.09:0,42,433	1/1:3,21:26:51.11:660,51,0	0/0:19,0:16:42.10:0,42,468	0/1:12,9:20:24.48:317,0,24	1/1:5,17:23:49.34:639,49,0	0/0:18,0:18:36.95:0,37,406	0/0:16,0:16:33.05:0,33,327	0/0:14,0:14:33.08:0,33,361	0/0:26,0:25:66.09:0,66,704	1/1:1,12:13:33.08:449,33,0	0/0:25,0:25:59.75:0,60,569	0/0:27,0:27:66.03:0,66,695	0/0:9,0:7:21.04:0,21,237
chr10	7879217	.	CAT	C	4954.49	PASS	AB=0.766;AC=46;AF=0.821;AN=56;BaseQRankSum=4.259;DP=478;FS=5.859;HRun=0;HaplotypeScore=98.2120;InbreedingCoeff=0.4219;MQ=65.24;MQ0=7;MQRankSum=0.649;QD=11.91;ReadPosRankSum=4.797;VQSLOD=4.0086;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:24:8.41:63,8,0	1/1:1,9:11:9.01:105,9,0	1/1:23,0:7:0.47:1,0,0	0/0:37,0:21:5.54:0,6,44	0/1:7,2:12:65.64:66,0,141	1/1:6,11:20:26.74:274,27,0	0/0:11,0:11:14.94:0,15,118	0/1:30,2:31:99:103,0,167	1/1:8,4:12:9.03:105,9,0	1/1:8,9:20:29.19:340,29,0	1/1:4,6:11:14.74:155,15,0	1/1:6,2:10:8.86:84,9,0	1/1:4,9:15:23.74:239,24,0	1/1:6,6:15:29.71:285,30,0	0/1:7,1:9:35.13:56,0,35	0/0:14,0:14:18:0,18,174	1/1:7,10:30:55.81:487,56,0	1/1:10,6:19:20.56:181,21,0	1/1:3,9:13:14.46:236,14,0	1/1:14,8:24:41.51:430,42,0	1/1:4,6:11:17.89:190,18,0	1/1:3,3:8:8.86:85,9,0	0/1:5,8:15:3.42:190,0,3	1/1:6,5:12:6.02:70,6,0	1/1:2,14:18:32.93:366,33,0	1/1:10,10:20:41.78:415,42,0	1/1:6,10:19:29.92:330,30,0	1/1:8,2:12:11.70:98,12,0
chr10	7879942	.	GTA	G	3524.20	PASS	AB=0.949;AC=25;AF=0.446;AN=56;BaseQRankSum=-10.209;DP=542;FS=15.110;HRun=0;HaplotypeScore=111.0014;InbreedingCoeff=0.4064;MQ=60.25;MQ0=15;MQRankSum=1.687;QD=13.00;ReadPosRankSum=-0.016;VQSLOD=2.6222;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:57.87:0,58,764	0/0:12,0:12:15.47:0,15,91	0/0:34,0:12:32.95:0,33,304	0/0:33,0:16:39.45:0,39,343	0/1:3,18:20:0.07:0,0,0	0/0:22,0:22:28.62:0,29,207	0/0:29,0:29:60.99:0,61,479	1/1:28,0:27:74.84:639,75,0	0/0:23,0:23:55.63:0,56,403	1/1:13,0:13:33.96:301,34,0	1/1:9,0:9:17.35:131,17,0	0/1:12,0:12:23.68:142,0,24	0/1:11,0:11:11.18:38,0,11	0/1:22,0:22:17.39:297,0,17	1/1:14,0:14:15.74:267,16,0	0/1:17,0:17:73.34:193,0,73	0/0:30,0:29:30.95:0,31,288	1/1:19,1:20:20.52:201,21,0	0/0:17,0:17:45.92:0,46,351	0/0:25,0:25:41.22:0,41,275	1/1:21,0:19:22.61:285,23,0	0/1:17,0:17:26.61:152,0,27	0/1:8,0:8:7.86:52,0,8	0/1:17,0:17:31.47:113,0,31	0/0:12,0:12:20.72:0,21,156	1/1:16,0:16:24.59:308,25,0	0/1:20,0:20:19.14:291,0,19	1/1:5,0:5:14.94:115,15,0
chr10	7879943	.	T	TAC	572.32	PASS	AB=0.916;AC=22;AF=0.393;AN=56;BaseQRankSum=0.017;DP=570;FS=0.748;HRun=0;HaplotypeScore=133.4125;InbreedingCoeff=0.4262;MQ=60.21;MQ0=15;MQRankSum=1.355;QD=2.03;ReadPosRankSum=-1.535;VQSLOD=2.4934;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:37,0:37:20.78:21,0,866	0/0:12,0:12:21.54:0,22,291	0/0:34,0:12:33.09:0,33,461	0/0:33,0:16:45.97:0,46,554	0/1:21,0:20:0:0,0,0	0/0:23,0:23:33.09:0,33,449	0/0:30,0:30:63.18:0,63,899	1/1:28,0:27:5.13:50,5,0	0/0:24,0:24:63.19:0,63,864	1/1:14,0:14:9.62:100,10,0	0/0:10,0:10:2.80:0,3,14	1/1:11,1:12:3.27:64,3,0	1/1:4,8:14:2.98:49,3,0	0/1:22,0:22:1.10:18,0,1	0/0:15,0:15:5.70:0,6,34	0/1:18,0:18:2.84:3,0,104	0/0:30,0:29:33.06:0,33,559	0/1:10,11:22:0.19:181,0,0	0/0:17,0:17:47.95:0,48,637	0/0:27,0:27:51.15:0,51,674	0/1:22,0:20:4.81:28,0,5	1/1:19,0:19:14.20:134,14,0	1/1:6,3:9:2.45:43,2,0	0/1:11,9:21:15.68:37,0,16	0/0:12,0:12:21.07:0,21,291	0/1:17,0:17:0.85:5,0,1	0/0:21,0:21:11.72:0,12,95	1/1:6,0:6:0.43:1,0,0
chr10	7879945	.	TACACACACACACAC	T	3650.14	PASS	AB=0.816;AC=15;AF=0.278;AN=54;BaseQRankSum=4.915;DP=615;FS=0.000;HRun=0;HaplotypeScore=231.7100;InbreedingCoeff=0.7738;MQ=58.55;MQ0=17;MQRankSum=-7.007;QD=20.86;ReadPosRankSum=1.491;VQSLOD=2.5516;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:39:54.19:0,54,2900	1/1:3,9:12:18.10:594,18,0	0/0:34,0:12:3.01:0,3,91	./.	0/0:24,0:23:2.42:0,2,166	1/1:12,10:23:20.90:539,21,0	0/1:24,6:31:99:164,0,164	0/0:28,0:26:27.09:0,27,938	1/1:16,6:23:15.05:567,15,0	0/0:16,0:16:24.08:0,24,1179	0/0:12,0:12:12.04:0,12,641	0/0:19,0:19:29.82:0,30,1530	0/0:19,0:19:16.30:0,16,662	0/0:24,0:24:48.16:0,48,2558	0/0:16,0:16:18.06:0,18,947	0/0:19,0:19:30.10:0,30,1712	1/1:18,11:29:15.03:430,15,0	0/0:24,0:24:30.10:0,30,1649	1/1:12,5:17:15.03:367,15,0	1/1:12,13:26:27.09:882,27,0	0/0:29,0:26:21.07:0,21,1094	0/0:21,0:21:35.67:0,36,2043	0/0:10,0:10:6.02:0,6,384	0/0:22,0:22:18.06:0,18,1098	1/1:8,5:13:3.01:107,3,0	0/0:20,0:20:27.08:0,27,1293	0/0:23,0:23:27.56:0,28,1525	0/0:8,0:8:15.05:0,15,700
chr10	7880318	.	C	CTT	26957.53	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-1.083;DP=609;FS=1.223;HRun=2;HaplotypeScore=86.6560;InbreedingCoeff=0.9995;MQ=89.42;MQ0=3;MQRankSum=-10.967;QD=48.05;ReadPosRankSum=6.461;VQSLOD=4.4351;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,14:16:36.12:673,36,0	1/1:0,16:16:39.13:730,39,0	0/0:26,0:26:59.36:0,59,1029	0/0:22,0:22:57.13:0,57,797	1/1:1,24:24:69.24:1292,69,0	1/1:0,20:20:60.21:1124,60,0	1/1:1,14:16:42.14:787,42,0	1/1:5,27:34:81.26:1441,81,0	1/1:0,13:13:30.10:562,30,0	1/1:1,28:29:84.29:1556,84,0	1/1:0,22:22:66.23:1234,66,0	1/1:0,16:17:42.07:787,42,0	1/1:1,16:18:45.15:843,45,0	1/1:1,25:27:69.24:1292,69,0	1/1:0,17:17:45.15:843,45,0	1/1:1,22:23:54.19:1012,54,0	1/1:2,25:28:63.22:1180,63,0	1/1:2,20:21:51.17:955,51,0	1/1:4,18:21:54.14:931,54,0	1/1:2,24:26:75.21:1348,75,0	1/1:0,13:13:39.13:730,39,0	1/1:0,17:18:51.13:914,51,0	1/1:0,15:16:41.35:737,41,0	1/1:3,13:16:36.12:674,36,0	1/1:0,19:19:51.17:954,51,0	1/1:0,28:29:87.27:1555,87,0	1/1:0,35:34:99:1851,99,0	1/1:2,21:23:51.17:954,51,0
chr10	7880567	.	CAACA	C	14529.03	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=16.435;DP=675;FS=1.809;HRun=0;HaplotypeScore=138.3041;InbreedingCoeff=0.9559;MQ=62.79;MQ0=0;MQRankSum=-4.227;QD=36.88;ReadPosRankSum=4.718;VQSLOD=5.2693;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,111,2671	0/0:5,0:5:15.05:0,15,377	0/0:31,0:29:63.59:0,64,1444	0/0:23,0:21:8.81:0,9,1025	1/1:4,13:17:27:420,27,0	0/0:28,0:28:75.25:0,75,1807	0/0:28,0:28:75.26:0,75,1739	1/1:6,19:25:57.14:844,57,0	0/0:24,0:24:60.21:0,60,1524	1/1:5,23:28:72.25:1257,72,0	1/1:0,23:23:57.19:962,57,0	1/1:4,19:23:51.17:893,51,0	1/1:2,16:18:35.98:630,36,0	1/1:2,19:21:39.13:667,39,0	1/1:1,33:34:81.28:1403,81,0	1/1:3,33:36:1.30:1237,1,0	0/0:33,0:33:90.30:0,90,2134	1/1:5,23:28:57.20:998,57,0	0/0:30,0:30:72.23:0,72,1697	0/0:25,0:25:72.25:0,72,1834	1/1:1,13:14:30.05:492,30,0	1/1:4,20:24:45.15:772,45,0	1/1:4,22:26:63.16:1069,63,0	1/1:2,24:26:45.15:788,45,0	0/0:14,0:14:36.12:0,36,919	1/1:1,18:19:54.16:888,54,0	1/1:5,20:25:51.17:892,51,0	1/1:0,7:7:18.06:315,18,0
chr10	7881276	.	A	AGTGTGTGTGT	10512.35	PASS	AB=1.000;AC=51;AF=0.911;AN=56;BaseQRankSum=-0.592;DP=565;FS=0.000;HRun=0;HaplotypeScore=214.8221;InbreedingCoeff=0.3501;MQ=67.20;MQ0=4;MQRankSum=-3.004;QD=21.11;ReadPosRankSum=1.871;VQSLOD=3.8670;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:15:3.01:149,3,0	1/1:6,2:8:5.99:170,6,0	0/0:27,0:23:18.06:0,18,442	0/0:40,0:28:15.03:0,15,206	1/1:25,0:24:6.02:263,6,0	1/1:29,3:33:27.09:1281,27,0	1/1:23,3:27:24.08:1009,24,0	1/1:26,0:25:18.06:777,18,0	0/1:9,0:9:12.43:133,0,12	1/1:23,0:23:18.05:526,18,0	1/1:30,0:30:7.96:330,8,0	1/1:21,0:21:3.01:130,3,0	1/1:20,0:20:15.05:549,15,0	1/1:7,0:7:9.03:376,9,0	1/1:15,0:14:1.29:125,1,0	1/1:18,0:18:9.03:389,9,0	1/1:11,3:14:9.03:405,9,0	1/1:11,0:10:9.03:383,9,0	1/1:16,1:17:22.89:755,23,0	1/1:24,2:26:9.03:436,9,0	1/1:16,0:15:3.01:44,3,0	1/1:18,0:17:8.63:389,9,0	1/1:14,0:14:8.50:375,8,0	1/1:22,0:23:15.02:520,15,0	1/1:17,1:21:0.15:231,0,0	1/1:19,0:19:6.02:267,6,0	1/1:30,0:30:9.50:328,10,0	1/1:9,0:9:9.03:171,9,0
chr10	7881303	.	G	GTCTGTGTGTGTGTA	14411.06	PASS	AB=0.932;AC=33;AF=0.589;AN=56;BaseQRankSum=7.318;DP=560;FS=20.262;HRun=0;HaplotypeScore=235.2267;InbreedingCoeff=-0.2401;MQ=49.62;MQ0=7;MQRankSum=-8.692;QD=29.53;ReadPosRankSum=6.532;VQSLOD=2.4338;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:12.04:0,12,191	0/1:7,0:7:99:138,0,110	0/0:31,0:21:58.50:0,58,1312	0/0:28,0:20:57.09:0,57,900	0/1:22,0:21:25.60:240,0,26	0/1:30,0:30:99:395,0,266	0/1:29,0:29:99:766,0,360	1/1:21,0:20:45.35:999,45,0	0/1:14,0:13:99:121,0,199	0/1:17,0:17:27.62:601,0,28	0/1:25,0:25:8.24:397,0,8	0/1:10,0:21:48.83:492,0,49	0/1:15,0:16:33.83:759,0,34	1/1:1,0:10:9.03:409,9,0	1/1:8,0:16:12.04:697,12,0	0/1:10,0:25:0.33:898,0,0	0/1:17,0:16:99:341,0,166	1/1:7,0:15:21.07:1047,21,0	0/1:16,0:16:99:425,0,247	0/1:16,0:16:53.85:211,0,54	0/1:14,0:12:8.95:99,0,9	1/1:9,0:26:11.56:682,12,0	1/1:3,0:17:8.65:410,9,0	1/1:11,0:28:20.21:877,20,0	0/1:15,0:15:49.87:180,0,50	0/1:10,0:25:24.58:1156,0,25	1/1:20,1:33:16.97:1800,17,0	0/1:9,0:9:23.93:272,0,24
chr10	7881385	.	AGGGTGTTTG	A	850.36	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.028;DP=588;FS=1.226;HRun=0;HaplotypeScore=151.0842;InbreedingCoeff=0.9428;MQ=89.13;MQ0=0;MQRankSum=-5.071;QD=50.02;ReadPosRankSum=-0.232;VQSLOD=3.4497;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,16:17:30.10:945,30,0	0/0:3,0:3:9.03:0,9,418	0/0:27,0:27:81.26:0,81,3397	0/0:19,0:19:57.20:0,57,2535	0/0:26,0:26:78.27:0,78,3747	0/0:25,0:25:72.25:0,72,3325	0/0:15,0:15:42.10:0,42,1914	0/0:16,0:16:48.16:0,48,2240	0/0:22,0:22:66.23:0,66,3231	0/0:25,0:25:72.23:0,72,3171	0/0:15,0:15:45.15:0,45,2165	0/0:19,0:19:39.13:0,39,1891	0/0:32,0:32:93.32:0,93,4495	0/0:17,0:17:45.15:0,45,2165	0/0:20,0:20:48.16:0,48,2341	0/0:22,0:22:50.85:0,51,2504	0/0:22,0:22:66.23:0,66,3089	0/0:18,0:17:42.14:0,42,2007	0/0:25,0:25:75.26:0,75,3478	0/0:26,0:26:78.27:0,78,3827	0/0:17,0:17:48.16:0,48,2316	0/0:19,0:19:54.19:0,54,2514	0/0:24,0:24:66.23:0,66,3272	0/0:29,0:29:57.20:0,57,2806	0/0:26,0:26:78.27:0,78,3809	0/0:20,0:20:60.19:0,60,2673	0/0:32,0:32:83.84:0,84,4017	0/0:10,0:10:24.08:0,24,1162
chr10	7881594	.	CA	C	7320.45	PASS	AB=0.895;AC=35;AF=0.625;AN=56;BaseQRankSum=9.277;DP=534;FS=5.728;HRun=10;HaplotypeScore=59.9157;InbreedingCoeff=0.8856;MQ=78.25;MQ0=1;MQRankSum=1.620;QD=20.17;ReadPosRankSum=3.655;VQSLOD=5.8854;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:18:47.96:0,48,512	0/0:7,0:7:21.06:0,21,232	0/0:12,0:11:14.62:0,15,135	0/0:14,1:14:3.11:0,3,118	1/1:5,17:22:20.80:409,21,0	0/0:20,0:20:16.08:0,16,405	0/0:11,1:12:7.03:0,7,306	1/1:2,23:25:68.97:595,69,0	0/0:21,0:21:63.11:0,63,668	1/1:5,19:24:56.98:495,57,0	1/1:2,19:21:53.99:469,54,0	1/1:1,12:13:32.99:286,33,0	1/1:4,22:26:32.94:422,33,0	1/1:1,17:18:47.99:417,48,0	1/1:1,21:22:56.99:495,57,0	1/1:1,14:15:41.99:365,42,0	0/0:18,1:19:28.06:0,28,525	1/1:1,14:15:35.99:312,36,0	0/1:15,2:17:10.01:10,0,350	0/0:25,0:25:66.13:0,66,710	1/1:2,13:15:35.99:312,36,0	1/1:4,19:24:52.30:448,52,0	1/1:1,17:18:44.99:391,45,0	1/1:4,20:24:56.97:495,57,0	0/0:22,0:22:57.15:0,57,630	1/1:1,18:19:53.89:456,54,0	1/1:1,33:35:89.02:761,89,0	1/1:3,7:10:20.99:182,21,0
chr10	7883604	.	A	AT	7066.02	PASS	AB=0.889;AC=27;AF=0.482;AN=56;BaseQRankSum=-13.549;DP=577;FS=1.888;HRun=9;HaplotypeScore=84.2427;InbreedingCoeff=0.9281;MQ=75.86;MQ0=0;MQRankSum=-1.972;QD=25.98;ReadPosRankSum=1.247;VQSLOD=5.1385;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:35.98:0,36,313	0/0:14,0:15:41.03:0,41,345	0/0:12,0:12:26.97:0,27,229	0/0:10,0:10:17.10:0,17,134	1/1:1,20:21:54.15:597,54,0	0/0:24,0:24:65.97:0,66,569	0/0:26,0:26:65.93:0,66,569	1/1:8,28:36:58.15:861,58,0	0/0:25,0:25:65.96:0,66,569	1/1:3,22:25:40.15:660,40,0	1/1:3,15:18:45.12:498,45,0	1/1:2,13:16:39.11:431,39,0	1/1:1,13:14:33.09:364,33,0	1/1:4,11:15:24.06:266,24,0	1/1:4,19:23:51.11:553,51,0	1/1:1,19:20:54.15:597,54,0	0/0:35,0:35:99:0,105,907	1/1:0,18:18:54.15:597,54,0	0/0:26,0:26:62.94:0,63,537	0/0:33,0:33:86.94:0,87,748	0/0:10,0:10:20.97:0,21,178	1/1:4,23:27:69.19:763,69,0	1/1:2,17:19:48.13:531,48,0	1/1:2,10:12:30.08:332,30,0	0/0:22,0:22:62.99:0,63,547	0/0:27,0:27:71.98:0,72,625	0/0:25,0:25:68.98:0,69,599	0/1:7,1:8:15.20:15,0,112
chr10	7883935	.	AAAC	A	1365.73	PASS	AB=0.976;AC=14;AF=0.250;AN=56;BaseQRankSum=4.625;DP=735;FS=5.654;HRun=0;HaplotypeScore=185.8723;InbreedingCoeff=0.7848;MQ=54.13;MQ0=10;MQRankSum=6.967;QD=7.76;ReadPosRankSum=1.560;VQSLOD=2.7931;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,1:35:18.04:0,18,1188	1/1:11,0:11:23.54:142,24,0	0/0:69,0:26:26.61:0,27,388	0/0:60,0:30:38.87:0,39,620	0/0:22,0:22:35.95:0,36,367	1/1:17,2:19:26.97:219,27,0	0/1:19,1:20:17.37:134,0,17	0/0:26,0:26:18.47:0,18,202	0/1:19,0:19:26.83:44,0,27	0/0:15,0:15:24.33:0,24,198	0/0:24,0:24:37.41:0,37,417	0/0:30,0:30:45.62:0,46,426	0/0:25,0:25:39.60:0,40,258	0/0:21,0:21:27.78:0,28,155	0/0:23,0:23:30.09:0,30,351	0/0:18,0:18:33.28:0,33,373	1/1:33,2:35:45.84:315,46,0	0/0:20,0:20:16.69:0,17,170	1/1:21,4:21:34.02:319,34,0	1/1:25,0:24:6.63:141,7,0	0/0:11,0:10:24.08:0,24,466	0/0:26,0:26:41:0,41,382	0/0:12,0:12:19.46:0,19,202	0/0:30,0:30:37.36:0,37,457	1/1:19,3:22:21.89:240,22,0	0/0:38,0:38:96.33:0,96,1845	0/0:39,0:39:96.31:0,96,1796	0/0:12,0:12:27.09:0,27,480
chr10	7883956	.	AAACAAC	A	6335.83	PASS	AB=0.908;AC=20;AF=0.357;AN=56;BaseQRankSum=-3.858;DP=740;FS=1.676;HRun=0;HaplotypeScore=215.0157;InbreedingCoeff=0.6519;MQ=57.56;MQ0=8;MQRankSum=-4.371;QD=21.55;ReadPosRankSum=-1.598;VQSLOD=4.4854;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:87.35:0,87,2360	0/0:9,0:9:23.86:0,24,352	0/0:52,0:20:39.33:0,39,800	0/0:41,0:21:26.43:0,26,603	0/1:26,0:26:99:211,0,347	0/0:19,0:21:54.08:0,54,744	0/0:20,0:21:52.64:0,53,697	0/1:29,0:29:99:382,0,274	0/0:15,0:17:47.71:0,48,802	1/1:3,11:14:33.07:559,33,0	1/1:9,13:22:42.05:687,42,0	1/1:5,22:27:42.11:857,42,0	1/1:2,27:29:54.18:1060,54,0	1/1:2,21:23:39.13:844,39,0	0/0:19,0:19:13.93:0,14,414	0/1:20,0:20:10.52:11,0,344	0/0:40,0:41:99:0,107,1434	0/1:8,11:19:53.97:58,0,54	0/0:25,0:23:53.74:0,54,703	0/0:23,0:22:60.17:0,60,1073	0/0:18,0:17:49.05:0,49,1243	1/1:5,30:35:71.94:984,72,0	1/1:4,18:22:19.22:370,19,0	1/1:8,20:28:1.13:313,1,0	0/0:27,0:28:73.83:0,74,1053	0/0:38,0:38:96.33:0,96,2826	0/0:45,0:45:99:0,102,2927	0/0:9,0:9:18.06:0,18,606
chr10	7885364	.	G	GA	597.43	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-4.115;DP=621;FS=1.728;HRun=8;HaplotypeScore=62.2804;InbreedingCoeff=0.9542;MQ=83.75;MQ0=0;MQRankSum=-3.037;QD=19.27;ReadPosRankSum=0.795;VQSLOD=3.6226;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,24:31:60.18:692,60,0	0/0:6,0:6:12:0,12,110	0/0:22,0:22:31.71:0,32,298	0/0:25,0:24:55.57:0,56,466	0/0:31,0:31:84.04:0,84,768	0/0:25,1:26:31.36:0,31,584	0/0:23,0:23:57:0,57,516	0/0:35,0:35:78.03:0,78,713	0/0:7,0:7:18.01:0,18,165	0/0:23,0:23:57.03:0,57,522	0/0:13,0:13:39:0,39,352	0/0:21,0:21:60.03:0,60,548	0/0:23,0:23:69.04:0,69,631	0/0:22,0:22:60.02:0,60,549	0/0:21,0:21:60.03:0,60,549	0/0:22,0:22:60.01:0,60,544	0/0:21,0:21:51.02:0,51,467	0/0:16,0:16:35.98:0,36,323	0/0:24,0:24:56.98:0,57,515	0/0:20,0:20:48.01:0,48,439	0/0:16,0:16:45.02:0,45,411	0/0:22,0:22:57.01:0,57,516	0/0:19,0:18:48.02:0,48,439	0/0:7,0:7:18:0,18,165	0/0:23,0:23:59.98:0,60,533	0/0:34,0:33:90.04:0,90,824	0/0:39,0:39:96.03:0,96,879	0/0:29,0:28:87.05:0,87,795
chr10	7885671	.	TTTC	T	1584.66	PASS	AC=14;AF=0.259;AN=54;BaseQRankSum=8.256;DP=514;FS=50.023;HRun=0;HaplotypeScore=110.0494;InbreedingCoeff=0.9459;MQ=58.80;MQ0=15;MQRankSum=-8.076;QD=16.17;ReadPosRankSum=1.239;VQSLOD=1.4860;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:49:99:0,130,3011	./.	0/0:24,0:12:33.11:0,33,743	0/0:25,0:17:43.35:0,43,880	0/0:20,0:20:60.15:0,60,1108	1/1:8,3:10:5.08:217,5,0	1/1:7,4:8:15.91:162,16,0	0/0:34,0:33:87.23:0,87,1865	1/1:15,4:19:39.18:343,39,0	0/0:18,0:16:44.54:0,45,891	0/0:11,0:11:33.11:0,33,757	0/0:11,0:11:27.54:0,28,461	0/0:9,0:9:24.07:0,24,428	0/0:12,0:11:33.09:0,33,608	0/0:21,0:20:48.15:0,48,1084	0/0:16,0:15:45.12:0,45,907	1/1:6,5:11:5.57:245,6,0	0/0:13,0:13:34.67:0,35,748	1/1:11,1:9:12.01:124,12,0	1/1:8,5:13:31.64:325,32,0	0/0:37,0:34:99:0,102,2210	0/0:15,0:15:45.12:0,45,901	0/0:15,0:15:39.01:0,39,694	0/0:15,0:15:34:0,34,666	1/1:15,6:21:38.68:354,39,0	0/0:28,0:27:78.27:0,78,1812	0/0:20,0:19:51.13:0,51,1122	0/0:20,0:20:60.21:0,60,1376
chr10	7885677	.	CTCT	C	1436.53	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=9.073;DP=553;FS=29.090;HRun=0;HaplotypeScore=114.9822;InbreedingCoeff=0.8871;MQ=53.79;MQ0=35;MQRankSum=-9.052;QD=11.05;ReadPosRankSum=0.435;VQSLOD=1.6679;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:50:99:0,105,2384	1/1:4,0:4:5.92:39,6,0	0/0:23,0:11:30.05:0,30,535	0/0:25,0:16:29.73:0,30,643	0/0:17,0:17:43.60:0,44,417	1/1:9,3:11:7.17:205,7,0	1/1:10,4:10:15.02:151,15,0	0/0:39,0:31:73.49:0,73,876	1/1:14,4:18:27.15:244,27,0	0/0:21,0:18:49.20:0,49,518	0/0:13,0:12:32.90:0,33,303	0/0:9,0:9:17.15:0,17,240	0/1:11,0:10:3.33:3,0,88	0/0:13,0:12:29.27:0,29,318	0/0:20,0:19:47.27:0,47,552	0/0:16,0:15:38.28:0,38,416	1/1:8,5:13:29.77:285,30,0	0/0:13,0:13:34.46:0,34,375	1/1:11,1:6:9.90:98,10,0	1/1:10,5:15:17.78:276,18,0	0/0:44,0:36:99:0,102,2142	0/0:16,0:16:40.63:0,41,348	0/0:16,0:16:17.38:0,17,239	0/0:18,0:17:29.79:0,30,233	1/1:24,6:30:11.53:331,12,0	0/0:32,0:30:84.19:0,84,1691	0/0:17,0:16:48.15:0,48,995	0/0:20,0:20:60.18:0,60,1259
chr10	7885689	.	CTCT	C	2425.76	PASS	AB=0.979;AC=25;AF=0.446;AN=56;BaseQRankSum=5.074;DP=580;FS=10.077;HRun=0;HaplotypeScore=115.8382;InbreedingCoeff=-0.1185;MQ=42.72;MQ0=67;MQRankSum=-3.777;QD=6.85;ReadPosRankSum=-1.338;VQSLOD=1.9499;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:42:99:0,101,2175	0/0:5,0:5:4.11:0,4,34	0/0:25,0:8:19.07:0,19,156	0/0:28,0:13:27.44:0,27,257	0/1:17,0:13:2.79:169,0,3	0/1:14,0:13:90.58:116,0,91	1/1:19,0:12:12.79:67,13,0	0/1:42,0:24:38.87:270,0,39	0/1:20,0:16:47.64:98,0,48	0/1:21,1:18:83.98:186,0,84	0/1:13,0:12:30.22:186,0,30	0/1:9,1:10:58.06:58,0,78	0/1:12,0:10:28.66:62,0,29	0/1:12,0:11:60.35:60,0,95	1/1:17,0:16:1.06:127,1,0	1/1:16,0:15:6.82:196,7,0	1/1:13,0:12:24.32:209,24,0	0/1:11,0:11:14.13:127,0,14	0/1:17,0:7:24.41:24,0,43	0/1:18,0:18:36.42:139,0,36	0/0:49,0:41:99:0,99,2018	0/1:13,1:12:55.69:130,0,56	1/1:11,2:13:9.83:179,10,0	0/1:13,2:12:6.79:80,0,7	0/1:39,0:39:29.40:117,0,29	0/0:36,0:31:70.21:0,70,1740	0/0:17,0:16:45.10:0,45,892	0/0:21,0:20:56.96:0,57,1008
chr10	7885710	.	TTTC	T	1502.93	PASS	AB=0.965;AC=27;AF=0.482;AN=56;BaseQRankSum=9.389;DP=517;FS=26.799;HRun=0;HaplotypeScore=103.0540;InbreedingCoeff=0.0709;MQ=39.31;MQ0=75;MQRankSum=-8.414;QD=5.92;ReadPosRankSum=-3.783;VQSLOD=0.0070;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:46:99:0,117,2611	0/0:4,0:4:5.94:0,6,44	0/0:29,0:3:3.92:0,4,14	0/0:43,0:6:5.82:0,6,62	0/1:12,0:7:12.14:51,0,12	0/1:16,0:14:82.15:164,0,82	0/1:23,0:15:10.18:117,0,10	0/1:19,0:4:13.93:14,0,16	0/1:15,0:11:24.89:86,0,25	0/1:11,2:8:12.93:89,0,13	1/1:4,0:3:2.99:23,3,0	0/1:8,1:9:12.79:46,0,13	1/1:12,0:10:11.93:97,12,0	1/1:7,0:7:8.35:58,8,0	0/1:9,2:10:18.68:148,0,19	1/1:11,0:9:4.26:80,4,0	0/1:13,0:12:66.76:105,0,67	1/1:5,1:4:8.98:77,9,0	1/1:13,0:10:14.84:112,15,0	1/1:14,0:12:0.67:125,1,0	0/0:57,0:48:99:0,120,2496	0/1:8,0:6:40.80:41,0,47	1/1:7,0:7:11.86:79,12,0	0/0:11,0:8:7.51:0,8,48	0/1:40,0:39:62.20:168,0,62	0/0:33,0:29:67.36:0,67,1619	0/0:15,0:13:39.13:0,39,902	0/0:18,0:16:38.76:0,39,837
chr10	7885733	.	CCTT	C	459.07	PASS	AB=0.976;AC=24;AF=0.462;AN=52;BaseQRankSum=3.589;DP=522;FS=2.060;HRun=0;HaplotypeScore=101.3479;InbreedingCoeff=0.0107;MQ=36.46;MQ0=109;MQRankSum=-5.795;QD=1.90;ReadPosRankSum=-4.527;VQSLOD=0.8321;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:71,0:63:99:0,110,2520	0/0:7,0:6:1.96:0,2,36	1/1:25,0:2:0.44:1,0,0	0/0:44,0:5:3:0,3,61	0/0:8,0:6:6.70:0,7,35	0/0:23,0:18:12.92:0,13,254	0/0:35,0:19:9.91:0,10,116	0/1:19,0:5:9.01:9,0,72	0/1:12,1:7:19.03:32,0,19	0/1:8,2:5:7.63:62,0,8	./.	0/1:4,0:3:10.45:10,0,13	1/1:5,1:4:5.91:65,6,0	1/1:5,0:2:1.25:3,1,0	1/1:12,0:9:4.66:23,5,0	0/0:10,0:8:2.75:0,3,48	0/1:9,0:8:7.05:7,0,39	1/1:5,1:3:3.65:47,4,0	0/1:21,0:9:16.62:17,0,38	1/1:14,0:10:8.61:36,9,0	0/0:62,0:52:60.74:0,61,1336	1/1:4,1:3:5.93:40,6,0	./.	0/1:9,0:5:22.65:23,0,53	0/1:39,0:37:99:114,0,146	0/1:31,0:26:45.62:46,0,288	0/0:16,0:13:10.97:0,11,327	0/1:14,0:12:77.48:77,0,170
chr10	7885749	.	CTCT	C	378.40	PASS	AB=0.953;AC=19;AF=0.352;AN=54;BaseQRankSum=3.057;DP=600;FS=13.586;HRun=0;HaplotypeScore=112.5833;InbreedingCoeff=-0.0271;MQ=33.44;MQ0=129;MQRankSum=-5.715;QD=1.46;ReadPosRankSum=-2.377;VQSLOD=1.1132;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:74,0:64:99:0,119,2432	0/1:12,1:11:9.21:9,0,30	./.	0/0:36,0:3:2.66:0,3,13	0/0:15,0:10:10.27:0,10,140	0/1:27,1:21:25.08:25,0,410	0/1:42,4:26:99:166,0,206	0/0:28,0:8:23.95:0,24,322	1/1:17,1:10:5.23:57,5,0	0/1:16,0:9:18.06:18,0,35	1/1:3,0:1:2.37:8,2,0	0/1:9,0:7:10.93:11,0,23	1/1:6,0:5:5.58:25,6,0	0/0:6,0:3:2.39:0,2,36	0/1:15,0:11:27.59:28,0,97	0/1:17,1:14:14.12:14,0,146	0/1:10,1:9:31.35:31,0,90	1/1:6,0:3:1.88:18,2,0	0/0:20,0:8:17.62:0,18,161	0/1:23,3:21:62.68:63,0,119	0/0:68,0:56:99:0,154,2771	0/0:6,0:3:2.04:0,2,6	0/1:4,0:2:0:0,0,0	0/0:11,0:5:8.97:0,9,103	0/1:37,4:39:55.44:55,0,369	0/0:26,0:17:36.17:0,36,672	0/0:19,0:14:6.73:0,7,399	0/0:17,0:13:33.40:0,33,566
chr10	7885764	.	CTCT	C	535.56	PASS	AB=0.975;AC=21;AF=0.404;AN=52;BaseQRankSum=8.469;DP=671;FS=8.879;HRun=0;HaplotypeScore=130.5781;InbreedingCoeff=-0.1455;MQ=31.19;MQ0=132;MQRankSum=-7.330;QD=1.47;ReadPosRankSum=-2.953;VQSLOD=1.2798;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:73,0:62:99:0,119,2390	0/0:20,0:18:2.63:0,3,107	./.	./.	0/0:22,1:17:11.78:0,12,75	0/1:34,0:27:57.35:57,0,249	0/1:50,0:26:45.34:45,0,127	0/1:40,0:19:10.55:11,0,211	0/1:25,0:17:15.25:15,0,37	0/1:16,2:10:13.44:87,0,13	1/1:6,0:4:1.82:5,2,0	0/1:7,0:5:12.52:13,0,18	0/1:7,2:8:1.17:72,0,1	0/1:8,0:5:22.61:25,0,23	1/1:15,2:14:0.81:113,1,0	0/1:17,0:13:24.41:49,0,24	0/1:12,0:10:7.87:8,0,21	1/1:6,0:2:0.56:12,1,0	0/1:20,0:9:2.04:2,0,166	0/1:43,0:37:55.56:56,0,233	0/0:67,0:57:99:0,135,2485	1/1:7,2:6:5.88:36,6,0	0/0:8,0:5:1.23:0,1,3	0/0:9,0:3:5.96:0,6,44	0/1:42,1:40:76.02:76,0,327	0/0:23,0:13:33.06:0,33,657	0/0:17,0:13:20.09:0,20,391	0/0:19,0:14:36.75:0,37,518
chr10	7885779	.	CTCT	C	1264.29	PASS	AB=0.952;AC=22;AF=0.393;AN=56;BaseQRankSum=6.878;DP=680;FS=10.634;HRun=0;HaplotypeScore=135.9345;InbreedingCoeff=0.0711;MQ=34.41;MQ0=114;MQRankSum=-7.245;QD=3.90;ReadPosRankSum=-3.435;VQSLOD=0.9670;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:72,0:62:99:0,110,2408	0/1:21,1:21:26.83:27,0,34	0/0:29,0:1:2.96:0,3,19	0/0:47,0:7:5.69:0,6,52	1/1:12,9:17:17.76:185,18,0	0/0:31,0:24:17.65:0,18,187	0/1:46,0:25:4.30:4,0,112	0/1:22,10:19:55.29:300,0,55	0/0:23,0:20:15.62:0,16,105	0/1:18,1:14:42.36:139,0,42	1/1:7,1:7:8.38:43,8,0	0/1:6,0:5:25.47:25,0,30	0/1:8,1:8:40:40,0,40	0/0:10,0:8:2.82:0,3,37	1/1:12,4:13:0.12:175,0,0	1/1:8,5:9:13.29:207,13,0	0/1:13,0:10:27:27,0,37	0/0:7,0:4:1.55:0,2,4	0/1:14,0:7:11.57:12,0,55	0/1:46,1:42:99:175,0,124	0/0:65,0:54:99:0,136,2707	1/1:10,2:10:0.08:0,0,0	1/1:5,3:5:6.97:30,7,0	0/0:15,0:9:1.72:0,2,4	0/1:37,1:36:38.66:39,0,227	0/0:23,0:14:33.06:0,33,637	0/0:17,0:14:36.91:0,37,650	0/0:15,0:11:30.05:0,30,542
chr10	7885782	.	T	TTTG	1975.46	PASS	AB=0.949;AC=20;AF=0.357;AN=56;BaseQRankSum=7.457;DP=672;FS=36.066;HRun=0;HaplotypeScore=140.8308;InbreedingCoeff=-0.1658;MQ=36.28;MQ0=111;MQRankSum=-8.566;QD=6.23;ReadPosRankSum=-4.288;VQSLOD=0.1651;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:75,0:64:99:0,118,2024	0/0:22,0:21:23.38:0,23,221	0/0:30,0:1:3.01:0,3,34	0/0:47,0:8:9.10:0,9,82	1/1:22,0:18:8.42:141,8,0	0/1:30,0:24:99:215,0,149	0/0:47,0:27:15.04:0,15,216	0/1:30,0:18:65.66:66,0,159	0/1:17,6:20:54.72:55,0,157	0/1:17,1:13:89.24:219,0,89	0/1:6,2:7:22.80:176,0,23	0/0:6,0:5:1.03:0,1,80	0/1:7,2:8:27.78:266,0,28	0/1:9,0:8:67.79:160,0,68	0/1:17,0:13:40.28:174,0,40	0/1:12,0:9:56.66:57,0,61	0/1:13,0:10:37.71:38,0,136	0/1:8,0:5:11.91:16,0,12	0/0:11,0:5:11.76:0,12,93	0/1:48,1:43:89.51:90,0,362	0/0:63,0:53:99:0,138,2382	1/1:11,0:9:12.04:183,12,0	1/1:7,1:5:8.01:34,8,0	0/1:17,0:11:31.49:97,0,31	0/1:31,2:32:99:161,0,400	0/0:21,0:13:30.10:0,30,527	0/0:18,0:15:42.12:0,42,678	0/0:15,0:11:30.06:0,30,487
chr10	7885791	.	CTTG	C	2104.89	PASS	AB=0.767;AC=23;AF=0.411;AN=56;BaseQRankSum=7.719;DP=637;FS=23.246;HRun=0;HaplotypeScore=128.3028;InbreedingCoeff=-0.2939;MQ=40.40;MQ0=85;MQRankSum=-7.378;QD=6.30;ReadPosRankSum=-1.893;VQSLOD=1.1511;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:77,0:67:99:0,121,2648	0/1:6,10:19:74.94:75,0,121	0/0:42,0:3:5.61:0,6,71	0/0:53,0:9:14.87:0,15,217	0/1:18,4:20:81.33:81,0,103	0/1:9,15:23:99:126,0,116	0/1:25,3:24:80.58:81,0,83	0/0:25,0:19:10.63:0,11,312	0/1:18,0:17:51.23:51,0,65	0/1:12,4:12:99:149,0,144	0/1:6,2:7:43.52:157,0,44	0/1:3,1:3:24.78:25,0,57	0/1:6,3:9:7.67:154,0,8	0/1:3,5:7:5.89:99,0,6	0/1:10,3:9:11.46:122,0,11	1/1:10,1:10:4.61:125,5,0	0/1:3,5:8:48.08:48,0,58	1/1:5,1:4:0.76:36,1,0	0/1:8,0:4:9.75:10,0,52	0/1:20,17:41:99:289,0,221	0/0:57,0:49:99:0,135,3046	1/1:7,6:11:15.03:165,15,0	0/1:6,1:5:14.11:55,0,14	0/1:12,5:12:31.98:128,0,32	0/1:23,6:30:99:294,0,303	0/0:18,1:13:36.12:0,36,781	0/0:15,0:13:36.12:0,36,828	0/0:13,0:10:21.07:0,21,495
chr10	7885806	.	CTCT	C	1564.68	PASS	AB=0.983;AC=22;AF=0.393;AN=56;BaseQRankSum=7.327;DP=714;FS=12.937;HRun=0;HaplotypeScore=136.0324;InbreedingCoeff=-0.1380;MQ=40.97;MQ0=94;MQRankSum=-7.705;QD=3.64;ReadPosRankSum=0.706;VQSLOD=2.0881;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:74,0:67:99:0,113,2517	0/1:24,0:24:58.99:59,0,113	0/0:39,0:4:11.98:0,12,113	0/1:46,0:10:3.41:3,0,101	0/0:24,0:21:30.53:0,31,409	0/1:22,1:22:44.27:44,0,230	0/1:48,0:30:34.03:34,0,178	0/1:33,0:16:10.52:11,0,320	0/0:20,0:18:7.89:0,8,199	0/1:23,0:19:2.66:225,0,3	0/1:15,0:12:18.78:105,0,19	0/1:6,0:5:52.56:53,0,56	0/1:14,0:14:31.40:219,0,31	1/1:10,0:7:20.96:180,21,0	0/1:17,0:13:20.10:20,0,163	0/1:13,0:12:3.05:3,0,215	0/0:15,0:10:22.18:0,22,193	0/1:11,0:8:25.70:41,0,26	0/1:19,1:8:32.82:33,0,142	0/1:45,5:44:99:237,0,198	0/0:51,0:44:99:0,111,2226	1/1:15,0:14:17.89:144,18,0	1/1:7,1:7:12.02:131,12,0	0/1:25,0:20:14.18:112,0,14	0/1:26,3:29:82.60:83,0,255	0/0:27,0:18:45.13:0,45,857	0/0:16,0:15:39.12:0,39,817	0/0:16,0:12:33.11:0,33,745
chr10	7885809	.	TTCC	T	2262.53	PASS	AB=0.852;AC=21;AF=0.375;AN=56;BaseQRankSum=6.993;DP=717;FS=29.479;HRun=0;HaplotypeScore=134.1315;InbreedingCoeff=0.0238;MQ=41.45;MQ0=90;MQRankSum=-8.111;QD=6.07;ReadPosRankSum=1.625;VQSLOD=1.4617;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:76,0:68:99:0,128,2304	0/1:23,0:23:2.26:2,0,251	0/0:38,0:4:6.90:0,7,88	0/1:44,0:10:6.70:7,0,59	0/1:23,1:21:58.19:58,0,364	0/0:23,0:22:10.15:0,10,368	0/0:46,0:30:20.29:0,20,288	0/1:29,3:16:99:101,0,120	0/0:20,0:18:25.65:0,26,320	0/1:19,6:21:16.39:442,0,16	1/1:4,11:12:8.15:190,8,0	0/1:3,4:5:41.40:115,0,41	0/1:4,10:14:44.15:407,0,44	1/1:4,6:7:21.07:315,21,0	0/1:19,2:17:85.84:86,0,268	0/0:13,1:13:7.60:0,8,301	0/0:15,0:10:24.04:0,24,361	0/1:5,6:8:23.67:81,0,24	0/1:25,0:11:6.78:7,0,254	0/1:47,0:41:42:42,0,398	0/0:51,0:43:99:0,102,1911	0/1:6,10:15:1.46:208,0,1	1/1:2,6:7:12.03:171,12,0	1/1:11,16:22:3.94:184,4,0	0/1:24,0:24:16.49:16,0,462	0/0:27,0:19:51.15:0,51,913	0/0:15,0:14:39.13:0,39,752	0/0:19,0:15:42.09:0,42,740
chr10	7888037	.	C	CGT	3775.98	PASS	AB=1.000;AC=33;AF=0.589;AN=56;BaseQRankSum=13.318;DP=729;FS=7.805;HRun=0;HaplotypeScore=249.5517;InbreedingCoeff=-0.4199;MQ=56.83;MQ0=2;MQRankSum=-10.834;QD=5.65;ReadPosRankSum=3.314;VQSLOD=2.0523;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,120,1582	1/1:15,0:15:14.32:97,14,0	0/0:16,0:12:12.45:0,12,132	0/1:26,0:17:13.29:13,0,152	0/1:26,0:26:35.56:94,0,36	0/1:24,0:24:19.78:134,0,20	0/1:39,0:39:36.25:168,0,36	0/1:35,0:35:10.12:10,0,174	0/1:35,0:35:94.09:131,0,94	0/1:29,0:29:45.63:135,0,46	1/1:10,0:10:0.80:76,1,0	0/1:27,0:27:10.47:132,0,10	0/1:38,0:38:87.62:182,0,88	0/1:33,0:33:58.92:193,0,59	0/1:28,0:28:22.17:232,0,22	0/1:32,0:32:71.14:200,0,71	0/1:25,0:25:77.65:78,0,104	0/1:23,0:23:19.41:87,0,19	0/1:17,0:17:52.75:53,0,104	0/1:16,0:16:36.49:107,0,36	1/1:10,42:52:11.21:128,11,0	0/1:29,0:29:24.29:61,0,24	0/1:19,0:19:7.56:8,0,65	1/1:32,0:32:14.16:69,14,0	0/1:19,0:19:39.09:74,0,39	1/1:4,19:23:51.40:766,51,0	1/1:6,5:11:30.09:464,30,0	1/1:0,5:5:6.02:85,6,0
chr10	7888039	.	T	TGC	7523.91	PASS	AB=1.000;AC=51;AF=0.911;AN=56;BaseQRankSum=6.654;DP=711;FS=0.000;HRun=0;HaplotypeScore=237.3617;InbreedingCoeff=0.6844;MQ=54.57;MQ0=3;MQRankSum=-5.363;QD=11.81;ReadPosRankSum=-0.061;VQSLOD=4.2779;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,114,1299	1/1:15,0:15:14.44:151,14,0	0/1:16,0:9:12.96:13,0,49	0/0:27,0:19:9.33:0,9,83	1/1:28,0:28:44.67:355,45,0	1/1:20,1:21:41.25:375,41,0	1/1:37,2:39:58.32:549,58,0	1/1:36,0:36:47.69:354,48,0	1/1:33,0:33:53.03:410,53,0	1/1:29,0:29:67.99:594,68,0	1/1:11,0:11:19.55:159,20,0	1/1:27,0:27:29.42:286,29,0	1/1:33,2:35:31.39:450,31,0	1/1:31,1:32:40.36:389,40,0	1/1:26,1:27:56.01:555,56,0	1/1:32,0:32:61.93:544,62,0	1/1:23,0:23:11.97:199,12,0	1/1:22,0:22:23.70:245,24,0	1/1:13,1:14:21.66:197,22,0	1/1:13,2:15:26.78:266,27,0	1/1:49,0:49:13.84:92,14,0	1/1:26,0:27:23.01:156,23,0	1/1:19,0:19:8.80:34,9,0	1/1:32,0:32:32.89:230,33,0	1/1:19,0:19:24.11:207,24,0	1/1:19,0:19:47.24:418,47,0	1/1:11,0:11:26.97:250,27,0	1/1:5,0:5:5.88:46,6,0
chr10	7888046	.	G	GCGCACACACA	24574.10	PASS	AB=0.903;AC=50;AF=0.893;AN=56;BaseQRankSum=1.805;DP=824;FS=2.492;HRun=0;HaplotypeScore=327.2333;InbreedingCoeff=0.5509;MQ=48.35;MQ0=4;MQRankSum=-4.904;QD=32.81;ReadPosRankSum=0.176;VQSLOD=3.3188;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,113,3201	1/1:2,3:17:15.01:691,15,0	0/1:21,0:10:20.68:21,0,46	0/0:25,0:13:12.78:0,13,96	1/1:22,6:30:38.28:669,38,0	1/1:20,0:28:48.06:1199,48,0	1/1:36,2:43:59.21:1397,59,0	1/1:46,0:46:99:1637,104,0	1/1:27,2:41:22.06:1163,22,0	1/1:6,0:29:80.46:1599,80,0	1/1:2,0:11:12.02:325,12,0	1/1:1,0:28:23.93:639,24,0	1/1:5,0:34:48.16:1467,48,0	1/1:8,0:38:30.10:829,30,0	1/1:27,9:38:53.97:1540,54,0	1/1:21,15:37:66.06:2121,66,0	0/1:19,2:25:8.04:1504,0,8	1/1:5,0:25:33.11:996,33,0	1/1:17,1:20:45.71:1021,46,0	1/1:12,0:17:21.96:719,22,0	1/1:60,0:61:11.16:226,11,0	1/1:5,0:30:15:334,15,0	1/1:2,0:18:2.78:40,3,0	1/1:32,0:42:38.55:666,39,0	1/1:15,2:20:23.95:309,24,0	1/1:18,0:24:71.57:1962,72,0	1/1:15,0:19:42.03:1252,42,0	1/1:3,0:4:8.90:249,9,0
chr10	7888095	.	GCA	G	4295.25	PASS	AB=0.921;AC=19;AF=0.339;AN=56;BaseQRankSum=3.268;DP=788;FS=7.080;HRun=0;HaplotypeScore=229.3080;InbreedingCoeff=0.7115;MQ=50.02;MQ0=6;MQRankSum=1.395;QD=15.29;ReadPosRankSum=2.230;VQSLOD=3.8782;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,1:50:89.34:0,89,1915	1/1:3,6:9:10.37:204,10,0	0/0:29,0:18:31.65:0,32,454	0/0:26,1:13:30.05:0,30,410	0/0:17,1:18:23.61:0,24,390	1/1:7,19:27:57.01:679,57,0	1/1:10,15:25:39.12:477,39,0	0/0:47,0:47:59.88:0,60,1287	1/1:9,30:40:74.39:1024,74,0	0/0:22,0:21:51.15:0,51,807	0/0:8,0:9:15.04:0,15,222	0/1:31,4:36:86.23:86,0,900	0/1:34,2:36:31.05:31,0,1044	0/0:36,0:36:60.20:0,60,978	0/0:43,1:44:50.44:0,50,1331	0/1:28,2:30:10.82:11,0,819	1/1:6,23:32:57:836,57,0	0/0:20,1:21:8.25:0,8,647	1/1:7,10:17:30.08:357,30,0	1/1:4,9:13:27.08:332,27,0	0/0:68,1:69:95.38:0,95,2056	0/0:18,1:19:2.18:0,2,539	0/0:10,0:10:20.67:0,21,342	0/0:39,1:40:9.91:0,10,624	1/1:5,10:14:21.07:259,21,0	0/0:28,1:29:44.41:0,44,1199	0/0:27,1:27:44.37:0,44,1234	0/0:9,0:9:27.09:0,27,440
chr10	7888140	.	TAC	T	3621.61	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=6.415;DP=848;FS=27.015;HRun=0;HaplotypeScore=152.9593;InbreedingCoeff=0.9946;MQ=57.12;MQ0=2;MQRankSum=1.097;QD=27.65;ReadPosRankSum=0.208;VQSLOD=2.3132;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,132,2162	0/0:5,0:5:15.05:0,15,255	0/0:40,0:34:54.86:0,55,1025	0/0:37,0:29:60.12:0,60,931	1/1:1,11:12:24.07:303,24,0	0/0:28,0:27:65.99:0,66,1034	0/0:32,0:32:75.26:0,75,1266	1/1:10,40:50:99:1459,117,0	0/0:34,0:34:87.30:0,87,1462	0/0:17,0:17:48.16:0,48,804	0/0:13,0:13:33.11:0,33,561	0/0:44,0:44:99:0,117,1979	0/0:47,0:47:99:0,126,2106	0/0:40,0:40:99:0,102,1710	1/1:3,32:35:69.22:897,69,0	1/1:4,30:34:30.25:963,30,0	0/0:32,0:31:74.43:0,74,1226	0/0:23,0:23:60.20:0,60,984	0/0:18,0:18:45.15:0,45,750	0/0:14,0:14:36.12:0,36,605	0/0:80,0:80:99:0,176,2856	0/0:23,0:23:54.17:0,54,888	0/0:14,0:14:36.11:0,36,581	0/0:47,0:46:84.27:0,84,1372	0/0:17,0:16:36.12:0,36,592	0/0:27,0:27:66.20:0,66,1051	0/0:27,0:27:78.22:0,78,1259	0/0:11,0:11:33.11:0,33,553
chr10	7888249	.	TACACACACATAC	T	6426.43	PASS	AB=0.632;AC=17;AF=0.304;AN=56;BaseQRankSum=12.004;DP=743;FS=17.422;HRun=0;HaplotypeScore=261.5816;InbreedingCoeff=0.9013;MQ=66.49;MQ0=3;MQRankSum=-11.260;QD=42.56;ReadPosRankSum=2.542;VQSLOD=3.1821;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,129,6534	0/0:10,0:10:27.09:0,27,1600	0/0:32,0:27:62.87:0,63,2525	0/0:50,0:41:99:0,111,4538	0/0:12,0:12:27.09:0,27,1509	0/0:23,0:22:45.15:0,45,2501	0/0:44,0:44:99:0,105,5456	0/0:59,0:59:99:0,169,7755	0/0:34,0:34:72.15:0,72,3192	1/1:1,9:10:24.03:672,24,0	1/1:0,13:13:20.73:724,21,0	1/1:3,19:22:33.11:1193,33,0	1/1:1,18:19:26.99:955,27,0	1/1:6,10:16:18.06:655,18,0	0/0:32,0:32:81.28:0,81,4538	0/0:24,0:24:42.14:0,42,2443	0/0:38,0:38:96.14:0,96,4551	0/1:5,7:12:99:629,0,163	0/0:15,0:15:39.13:0,39,1850	0/0:7,0:7:21.06:0,21,995	0/0:103,0:103:99:0,263,13937	1/1:2,15:17:18.06:655,18,0	1/1:2,11:13:21.07:705,21,0	1/1:8,21:28:10.05:238,10,0	0/0:11,0:11:30.09:0,30,1573	0/0:24,0:24:69.22:0,69,3585	0/0:16,0:16:39.13:0,39,2266	0/0:8,0:8:21.07:0,21,1260
chr10	7888371	.	GCA	G	4768.99	PASS	AB=0.877;AC=49;AF=0.875;AN=56;BaseQRankSum=-3.282;DP=376;FS=9.707;HRun=0;HaplotypeScore=87.6610;InbreedingCoeff=0.3130;MQ=55.44;MQ0=13;MQRankSum=4.875;QD=14.63;ReadPosRankSum=4.781;VQSLOD=3.6650;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,7:10:18.06:221,18,0	1/1:1,5:6:2.90:37,3,0	0/0:26,0:8:10.65:0,11,96	0/0:24,0:7:8.30:0,8,112	1/1:11,0:11:2.98:21,3,0	1/1:6,10:16:16.17:244,16,0	1/1:6,10:16:7.56:308,8,0	0/1:36,0:34:15.17:231,0,15	1/1:5,6:10:22.85:238,23,0	1/1:4,6:10:20.90:236,21,0	1/1:1,7:8:3.01:37,3,0	0/1:5,6:12:1.55:133,0,2	1/1:0,11:11:18.06:221,18,0	1/1:4,8:11:15.05:185,15,0	0/1:18,0:18:12.13:143,0,12	1/1:12,1:13:20.88:163,21,0	1/1:5,12:16:20.80:258,21,0	1/1:5,5:8:6.02:74,6,0	1/1:5,5:10:21.06:247,21,0	1/1:3,4:7:6.02:74,6,0	1/1:6,13:19:33.10:406,33,0	1/1:3,2:5:6.02:74,6,0	1/1:1,3:4:3.01:37,3,0	1/1:7,5:12:15.05:184,15,0	1/1:4,10:14:14.88:184,15,0	1/1:1,7:8:21.07:258,21,0	1/1:5,10:16:24.07:295,24,0	1/1:6,6:12:23.90:261,24,0
chr10	7888387	.	ACG	A	2947.89	PASS	AB=1.000;AC=49;AF=0.875;AN=56;BaseQRankSum=-2.802;DP=306;FS=26.028;HRun=0;HaplotypeScore=81.6469;InbreedingCoeff=-0.0128;MQ=54.14;MQ0=12;MQRankSum=4.448;QD=10.27;ReadPosRankSum=1.704;VQSLOD=1.6715;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:9,0:9:17.61:79,18,0	1/1:5,0:5:2.74:12,3,0	0/1:17,0:5:8.76:9,0,50	0/0:19,0:6:0.07:0,0,115	1/1:1,7:7:3.01:46,3,0	1/1:13,0:13:21.40:128,21,0	1/1:11,0:11:24.78:119,25,0	1/1:5,27:30:77.89:876,78,0	0/1:9,0:8:3.92:67,0,4	1/1:11,0:9:3.88:62,4,0	1/1:10,0:10:2.71:17,3,0	1/1:8,0:8:10.98:48,11,0	1/1:13,0:13:6.94:60,7,0	1/1:8,0:7:13.72:60,14,0	1/1:3,8:11:27.08:390,27,0	1/1:2,10:12:20.81:286,21,0	1/1:17,0:16:3.97:95,4,0	0/1:9,0:7:18.78:19,0,27	0/1:12,0:12:14.16:87,0,14	1/1:5,0:5:5.49:24,5,0	1/1:13,0:13:30.19:131,30,0	1/1:2,0:2:5.49:24,5,0	1/1:3,0:3:2.88:15,3,0	1/1:7,0:7:13.78:60,14,0	0/1:12,0:12:40.83:41,0,43	1/1:7,0:7:18.52:74,19,0	1/1:12,0:12:22.12:99,22,0	1/1:9,2:10:13.82:146,14,0
chr10	7888394	.	CATAT	C	192.18	PASS	AB=0.832;AC=6;AF=0.200;AN=30;BaseQRankSum=-2.099;DP=258;FS=0.000;HRun=0;HaplotypeScore=86.4744;InbreedingCoeff=0.3542;MQ=55.58;MQ0=11;MQRankSum=-1.155;QD=3.15;ReadPosRankSum=-0.708;VQSLOD=1.3658;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	0/0:17,0:6:0:0,0,0	./.	0/0:10,0:11:11.07:0,11,177	0/0:5,0:7:6.02:0,6,96	0/1:33,0:32:5.47:5,0,524	0/0:4,0:5:6.02:0,6,105	1/1:7,1:8:12.03:152,12,0	0/0:7,2:9:2.84:0,3,43	./.	1/1:7,0:7:3.01:48,3,0	./.	./.	0/0:10,0:10:3.01:0,3,70	0/0:16,0:18:22.49:0,22,302	0/1:5,3:7:3.47:88,0,3	0/0:7,0:9:15.05:0,15,296	./.	./.	./.	./.	./.	0/0:9,0:10:9.03:0,9,171	0/0:6,0:6:3.01:0,3,72	./.	0/0:9,0:10:12.04:0,12,232
chr10	7888805	.	CA	C	12833	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=13.396;DP=752;FS=1.173;HRun=2;HaplotypeScore=76.4980;InbreedingCoeff=0.9989;MQ=85.75;MQ0=0;MQRankSum=-2.884;QD=35.55;ReadPosRankSum=1.813;VQSLOD=5.4758;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,111,1620	0/0:12,0:12:36.12:0,36,539	0/0:29,0:29:65.48:0,65,1094	0/0:28,0:28:76.42:0,76,1120	1/1:0,33:33:90.29:1168,90,0	0/0:30,0:30:87.28:0,87,1284	0/0:22,0:22:66.22:0,66,989	1/1:0,37:37:99:1347,108,0	0/0:29,0:29:81.19:0,81,1164	1/1:1,32:33:93.25:1173,93,0	1/1:0,24:24:69.22:896,69,0	1/1:0,27:27:75.24:973,75,0	1/1:0,28:28:81.26:1052,81,0	1/1:1,31:32:87.28:1128,87,0	1/1:0,24:24:69.22:896,69,0	1/1:1,38:39:63.39:1318,63,0	0/0:22,0:22:66.20:0,66,949	1/1:0,9:9:18.06:234,18,0	0/0:26,0:26:75.20:0,75,1081	0/0:23,0:23:66.20:0,66,950	0/0:22,0:22:66.22:0,66,988	1/1:1,28:29:78.25:1013,78,0	1/1:0,24:24:63.20:818,63,0	1/1:0,22:22:63.20:817,63,0	0/0:27,0:27:78.24:0,78,1147	0/0:34,0:34:96.31:0,96,1404	0/0:27,0:27:81.27:0,81,1194	0/0:22,0:22:54.18:0,54,809
chr10	7889899	.	C	CCCAA	30860.02	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-14.184;DP=668;FS=4.650;HRun=0;HaplotypeScore=97.7299;InbreedingCoeff=0.9973;MQ=75.06;MQ0=1;MQRankSum=-7.671;QD=70.78;ReadPosRankSum=3.892;VQSLOD=7.4154;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,22:23:69.24:1861,69,0	0/0:12,0:12:27.09:0,27,513	0/0:28,0:26:74.59:0,75,1281	0/0:24,0:23:56.78:0,57,1026	1/1:3,21:24:66.23:1772,66,0	0/0:30,0:30:90.29:0,90,1664	0/0:18,0:18:48.16:0,48,905	1/1:12,16:29:81.23:1980,81,0	0/0:18,0:18:51.17:0,51,957	1/1:4,30:34:96.33:2552,96,0	1/1:5,21:25:69.17:1669,69,0	1/1:1,15:16:45.15:1210,45,0	1/1:7,22:29:78.25:2029,78,0	1/1:5,20:25:69.24:1774,69,0	1/1:3,27:31:84.25:2162,84,0	1/1:4,21:25:56.78:1498,57,0	0/0:21,0:21:63.16:0,63,1117	1/1:4,15:19:51.13:1296,51,0	0/0:25,0:25:69.18:0,69,1230	0/0:26,0:26:78.27:0,78,1466	1/1:2,5:8:15.01:344,15,0	1/1:4,21:25:69.24:1853,69,0	1/1:3,26:29:78.22:2036,78,0	1/1:4,17:21:57.12:1377,57,0	0/0:30,0:30:84.29:0,84,1572	1/1:4,26:30:84.27:2156,84,0	1/1:4,28:33:96.33:2562,96,0	1/1:0,9:9:27.09:729,27,0
chr10	7889986	.	G	GT	9597.41	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-14.089;DP=582;FS=8.631;HRun=6;HaplotypeScore=53.1622;InbreedingCoeff=0.9986;MQ=85.12;MQ0=0;MQRankSum=-3.999;QD=33.09;ReadPosRankSum=3.342;VQSLOD=4.6688;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,11:11:27.09:338,27,0	0/0:7,0:7:21.05:0,21,214	0/0:23,0:23:54.14:0,54,553	0/0:14,0:14:25.89:0,26,266	0/0:30,0:31:89.23:0,89,893	0/0:30,0:30:84.18:0,84,851	0/0:19,0:19:39.07:0,39,390	0/0:35,0:35:95.96:0,96,898	0/0:16,0:16:48.08:0,48,475	1/1:4,25:29:78.24:971,78,0	1/1:4,28:32:81.22:1001,81,0	1/1:0,8:8:24.08:302,24,0	1/1:2,22:24:66.21:830,66,0	1/1:2,24:26:69.22:868,69,0	0/0:19,0:19:51.05:0,51,507	0/0:22,0:22:60.13:0,60,611	0/0:16,0:16:45.10:0,45,459	1/1:2,20:22:26.58:647,27,0	0/0:16,0:16:45.09:0,45,453	0/0:25,0:25:69.15:0,69,703	1/1:2,19:21:54.17:679,54,0	1/1:1,19:20:54.17:679,54,0	1/1:4,17:21:57.16:693,57,0	1/1:4,15:19:48.13:589,48,0	0/0:19,0:19:51.05:0,51,497	1/1:1,21:22:63.20:793,63,0	1/1:4,21:25:66.21:830,66,0	1/1:0,10:10:30.10:377,30,0
chr10	7890332	.	TTAA	T	14221.82	PASS	AB=0.512;AC=35;AF=0.625;AN=56;BaseQRankSum=14.562;DP=533;FS=16.125;HRun=0;HaplotypeScore=122.5331;InbreedingCoeff=0.9461;MQ=69.39;MQ0=0;MQRankSum=-3.259;QD=37.62;ReadPosRankSum=3.281;VQSLOD=5.2327;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,24:26:57.15:901,57,0	0/0:8,0:8:24.07:0,24,476	0/0:10,0:10:30.10:0,30,608	0/0:6,0:6:16.92:0,17,223	1/1:2,25:27:57.19:919,57,0	0/0:14,0:14:36.11:0,36,728	0/0:21,0:21:63.22:0,63,1390	1/1:4,32:36:96.30:1478,96,0	0/0:20,0:20:54.19:0,54,1205	1/1:3,20:23:60.18:915,60,0	1/1:1,20:21:42.14:685,42,0	1/1:1,18:19:45.15:722,45,0	1/1:0,25:25:66.23:1076,66,0	1/1:0,20:20:45.15:734,45,0	1/1:0,14:14:33.11:538,33,0	1/1:0,6:6:18.06:294,18,0	0/0:24,0:24:69.24:0,69,1505	1/1:1,19:20:42.14:686,42,0	0/0:11,0:11:27.08:0,27,561	0/0:18,0:18:50.38:0,50,1011	1/1:4,27:31:54.18:868,54,0	1/1:0,16:16:33.11:539,33,0	1/1:0,17:17:51.17:832,51,0	1/1:1,25:26:60.20:980,60,0	0/0:23,0:23:51.17:0,51,1117	0/1:1,21:22:0.85:930,0,1	1/1:2,23:25:60.20:979,60,0	1/1:1,3:4:9.03:147,9,0
chr10	7890574	.	TA	T	2254.57	PASS	AB=0.929;AC=9;AF=0.161;AN=56;BaseQRankSum=2.706;DP=598;FS=0.429;HRun=6;HaplotypeScore=84.1233;InbreedingCoeff=0.8834;MQ=69.47;MQ0=0;MQRankSum=1.021;QD=21.27;ReadPosRankSum=-1.785;VQSLOD=2.4342;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,102,1231	0/0:12,0:12:36.12:0,36,463	0/1:12,0:11:7.05:7,0,123	0/0:12,0:11:15.16:0,15,199	1/1:0,31:31:84.01:847,84,0	0/0:15,0:15:42.10:0,42,501	0/0:16,0:16:48.13:0,48,590	1/1:2,28:30:81.13:825,81,0	0/0:18,0:18:54.15:0,54,667	0/0:24,0:23:54.17:0,54,693	0/0:16,0:16:39.12:0,39,488	0/0:21,0:21:47.93:0,48,597	0/0:26,0:26:69.13:0,69,838	0/0:27,0:27:75.07:0,75,909	1/1:0,18:18:36.09:386,36,0	1/1:1,13:14:33.08:353,33,0	0/0:31,0:31:93.23:0,93,1123	0/0:26,0:26:78.17:0,78,919	0/0:20,0:20:54.16:0,54,669	0/0:38,0:38:99:0,108,1358	0/0:13,0:13:36.10:0,36,446	0/0:19,0:19:42.07:0,42,518	0/0:20,0:20:59.06:0,59,665	0/0:13,0:13:39.09:0,39,459	0/0:34,0:34:99:0,99,1196	0/0:22,0:22:63.19:0,63,784	0/0:23,0:23:63.02:0,63,722	0/0:10,0:10:24.06:0,24,282
chr10	7891655	.	T	TG	8698.31	PASS	AC=28;AF=0.538;AN=52;BaseQRankSum=-6.706;DP=647;FS=2.457;HRun=4;HaplotypeScore=62.6848;InbreedingCoeff=0.9380;MQ=48.49;MQ0=34;MQRankSum=-0.876;QD=26.52;ReadPosRankSum=4.591;VQSLOD=3.7839;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,23:27:54.18:737,54,0	0/0:16,0:16:48.11:0,48,525	./.	./.	0/0:32,0:32:75.15:0,75,823	0/0:30,0:29:51.10:0,51,549	0/0:22,0:21:47.97:0,48,490	0/0:29,0:23:60.14:0,60,665	0/0:19,0:19:54.10:0,54,582	1/1:12,21:29:4.03:780,4,0	1/1:4,24:27:60.15:796,60,0	1/1:2,18:20:27.09:369,27,0	1/1:5,18:22:45.15:614,45,0	1/1:1,16:17:42.14:573,42,0	0/0:22,0:21:36.09:0,36,399	0/0:13,0:13:21.04:0,21,228	0/0:32,0:28:66.18:0,66,739	1/1:11,9:16:0.13:225,0,0	0/0:20,0:15:33.09:0,33,374	0/0:34,0:34:93.27:0,93,1054	1/1:2,8:9:18.06:236,18,0	1/1:0,15:15:30.01:383,30,0	1/1:2,36:38:87.01:1182,87,0	1/1:1,12:13:27.09:368,27,0	0/0:35,0:35:87.21:0,87,964	1/1:4,20:22:54.16:721,54,0	1/1:7,22:27:56.34:771,56,0	1/1:3,26:26:69.23:943,69,0
chr10	7892127	.	TGAGAGAGA	T	6772.61	PASS	AB=0.759;AC=29;AF=0.537;AN=54;BaseQRankSum=-1.341;DP=625;FS=15.854;HRun=0;HaplotypeScore=166.9035;InbreedingCoeff=0.5500;MQ=57.39;MQ0=24;MQRankSum=-7.193;QD=17.59;ReadPosRankSum=1.971;VQSLOD=3.4658;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:15.03:0,15,320	0/1:2,0:8:0.99:1,0,74	./.	0/1:63,0:26:12.11:12,0,14	1/1:11,11:22:17.44:503,17,0	0/1:12,0:32:32.39:32,0,361	0/0:5,0:18:7.08:0,7,233	1/1:29,0:26:2.51:7,3,0	0/0:8,0:17:26.92:0,27,214	1/1:11,13:24:9.56:620,10,0	1/1:13,10:25:24.03:441,24,0	1/1:7,8:17:21.07:495,21,0	1/1:6,13:19:21.06:485,21,0	1/1:8,14:21:24.08:610,24,0	1/1:3,9:13:33.10:765,33,0	1/1:9,8:17:12.41:596,12,0	0/0:8,0:24:41.92:0,42,340	0/1:11,1:12:83.38:109,0,83	0/0:13,0:20:26.24:0,26,649	0/0:16,0:27:1.44:0,1,178	0/0:7,0:7:3.01:0,3,102	1/1:7,17:24:38.45:933,38,0	1/1:6,16:24:36.59:908,37,0	1/1:10,11:21:9.03:230,9,0	0/1:7,0:13:26.39:26,0,78	0/0:27,0:25:54.16:0,54,1523	0/0:22,0:20:21.41:0,21,446	0/0:10,0:9:21.07:0,21,713
chr10	7896391	.	G	GCC	3025.91	PASS	AB=0.600;AC=24;AF=0.429;AN=56;BaseQRankSum=9.827;DP=495;FS=0.426;HRun=9;HaplotypeScore=74.4449;InbreedingCoeff=0.8478;MQ=85.23;MQ0=0;MQRankSum=-0.518;QD=15.52;ReadPosRankSum=-2.932;VQSLOD=1.2513;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:21:50.70:0,51,490	1/1:2,0:7:5.97:49,6,0	0/1:8,0:17:0.83:88,0,1	0/0:17,0:17:26.99:0,27,276	1/1:7,7:15:20.45:210,20,0	1/1:2,1:8:9.02:110,9,0	1/1:4,3:19:15:159,15,0	1/1:3,7:11:17.53:216,18,0	1/1:5,1:14:22.86:223,23,0	0/0:23,0:23:54.09:0,54,569	0/0:16,0:16:18.28:0,18,356	0/0:21,0:21:60.15:0,60,639	0/0:24,0:24:60.14:0,60,638	0/0:20,0:20:57.14:0,57,606	1/1:3,22:27:62.14:868,62,0	1/1:1,23:26:56.64:813,57,0	0/1:2,0:12:10.89:151,0,11	0/0:21,0:22:51.04:0,51,587	1/1:11,0:17:20.99:187,21,0	1/1:4,3:7:11.90:91,12,0	0/0:16,0:16:37.31:0,37,386	0/0:24,0:24:57.05:0,57,580	0/0:31,0:32:60.05:0,60,693	0/0:24,0:24:60.14:0,60,639	1/1:4,0:15:8.51:76,9,0	0/0:13,0:13:36.09:0,36,383	0/0:18,0:20:56.84:0,57,578	0/0:7,0:7:15.04:0,15,160
chr10	7896741	.	TGGA	T	4287.12	PASS	AC=8;AF=0.148;AN=54;BaseQRankSum=13.039;DP=729;FS=12.251;HRun=0;HaplotypeScore=107.2569;InbreedingCoeff=0.9977;MQ=84.14;MQ0=0;MQRankSum=-4.706;QD=35.43;ReadPosRankSum=0.931;VQSLOD=5.3613;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,49:56:99:2104,138,0	0/0:6,0:6:18.06:0,18,397	0/0:25,0:25:60.17:0,60,1162	0/0:21,0:21:51.19:0,51,932	0/0:17,0:17:39.12:0,39,829	0/0:18,0:18:51.16:0,51,1080	0/0:38,0:38:99:0,111,2353	0/0:29,0:29:78.26:0,78,1700	0/0:37,0:37:93.31:0,93,2022	0/0:22,0:22:63.21:0,63,1338	0/0:14,0:14:42.14:0,42,938	0/0:31,0:31:87.30:0,87,1913	0/0:21,0:21:60.14:0,60,1249	0/0:25,0:25:72.23:0,72,1566	0/0:37,0:37:99:0,108,2365	0/0:30,0:30:81.28:0,81,1771	0/0:45,0:45:99:0,132,2945	0/0:21,0:21:57.20:0,57,1271	0/0:16,0:16:45.15:0,45,938	0/0:27,0:27:81.27:0,81,1765	1/1:2,24:26:50.78:596,51,0	0/0:37,0:37:96.32:0,96,2103	0/0:32,0:32:93.32:0,93,2075	0/0:41,0:41:99:0,114,2542	0/0:18,0:18:51.16:0,51,1098	1/1:2,14:16:42.14:686,42,0	1/1:1,22:23:57.15:901,57,0	./.
chr10	7896935	.	T	TTTTTCTTGATTCTTCACC	51120.80	PASS	AC=24;AF=0.444;AN=54;BaseQRankSum=2.974;DP=686;FS=7.601;HRun=0;HaplotypeScore=301.8394;InbreedingCoeff=0.9996;MQ=76.73;MQ0=3;MQRankSum=-20.043;QD=171.55;ReadPosRankSum=-0.095;VQSLOD=3.3746;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:23,15:40:99:7946,105,0	1/1:9,4:14:38.91:2833,39,0	0/0:34,0:32:66.45:0,66,2262	0/0:27,0:21:30.13:0,30,910	0/0:28,0:28:84.29:0,84,4184	1/1:13,5:19:48.16:3564,48,0	1/1:18,4:25:57.15:3426,57,0	0/0:24,0:24:60.20:0,60,2516	1/1:11,3:16:39.09:2561,39,0	0/0:23,0:23:63.21:0,63,2803	0/0:16,0:16:48.16:0,48,2246	0/0:22,0:22:63.22:0,63,3051	0/0:25,0:25:75.26:0,75,3669	0/0:23,0:23:69.24:0,69,3372	0/0:29,0:29:81.23:0,81,3380	0/0:20,0:20:60.21:0,60,2955	1/1:24,5:30:75.26:5245,75,0	0/0:28,0:28:81.28:0,81,3668	1/1:7,5:13:36.12:2502,36,0	1/1:20,10:32:63.21:4475,63,0	1/1:12,0:12:24.04:1277,24,0	0/0:28,0:28:69.21:0,69,2917	0/0:24,0:24:72.22:0,72,3275	0/0:34,0:34:99:0,102,4852	1/1:28,9:39:93.32:6336,93,0	1/1:18,10:28:72.25:5853,72,0	1/1:15,9:29:72.72:5103,73,0	./.
chr10	7897390	.	A	AT	3799.34	PASS	AB=0.537;AC=9;AF=0.161;AN=56;BaseQRankSum=6.149;DP=685;FS=6.676;HRun=3;HaplotypeScore=87.2776;InbreedingCoeff=0.8842;MQ=83.18;MQ0=0;MQRankSum=-3.833;QD=36.89;ReadPosRankSum=1.682;VQSLOD=4.0067;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,26:26:75.25:1050,75,0	0/0:16,0:16:48.13:0,48,563	0/0:21,0:21:60.17:0,60,702	0/0:20,0:20:56.83:0,57,643	0/0:26,0:26:78.22:0,78,922	0/0:32,0:32:90.28:0,90,1080	0/0:23,0:23:57.10:0,57,645	0/0:29,0:29:78.21:0,78,908	0/0:30,0:30:81.25:0,81,972	0/0:35,0:35:99:0,102,1214	0/0:21,0:21:63.19:0,63,756	0/0:29,0:29:87.27:0,87,1043	0/0:33,0:33:99:0,99,1185	0/0:30,0:30:81.24:0,81,960	0/0:28,0:28:84.23:0,84,985	0/0:30,0:30:90.25:0,90,1057	0/0:22,0:22:57.17:0,57,683	0/0:16,0:16:42.13:0,42,502	0/0:29,0:29:78.23:0,78,927	0/0:23,0:23:66.19:0,66,780	1/1:0,18:18:45.15:630,45,0	0/0:23,0:23:63.15:0,63,721	0/0:20,0:20:60.18:0,60,719	0/0:22,0:22:66.15:0,66,763	0/0:24,0:24:69.21:0,69,828	0/1:3,19:22:8.80:734,0,9	1/1:0,22:21:63.21:882,63,0	1/1:0,15:15:36.12:504,36,0
chr10	7897430	.	AT	A	6642.39	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=7.127;DP=730;FS=0.637;HRun=4;HaplotypeScore=92.3620;InbreedingCoeff=0.9984;MQ=78.22;MQ0=0;MQRankSum=-0.272;QD=32.40;ReadPosRankSum=3.165;VQSLOD=5.1894;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:81.16:0,81,1052	1/1:0,12:12:36.11:432,36,0	0/0:19,0:19:48.12:0,48,608	0/0:15,0:15:17.97:0,18,511	0/0:37,0:37:99:0,111,1518	1/1:2,34:36:87.27:1044,87,0	1/1:1,26:27:69.21:828,69,0	0/0:36,0:36:99:0,102,1386	1/1:0,28:28:81.25:972,81,0	0/0:37,0:37:99:0,102,1426	0/0:17,0:17:48.16:0,48,670	0/0:27,0:27:78.23:0,78,1043	0/0:38,0:38:99:0,111,1520	0/0:24,0:24:69.23:0,69,963	0/0:29,0:29:87.28:0,87,1202	0/0:29,0:29:87.29:0,87,1218	1/1:0,26:26:72.22:861,72,0	0/0:20,0:20:57.15:0,57,775	1/1:0,22:22:66.19:782,66,0	1/1:0,23:23:66.20:788,66,0	0/0:21,0:21:57.16:0,57,761	0/0:27,0:27:78.22:0,78,1048	0/0:27,0:27:81.26:0,81,1106	0/0:26,0:26:66.22:0,66,922	1/1:1,30:31:78.24:936,78,0	0/0:29,1:30:48.27:0,48,1097	0/0:22,0:21:63.20:0,63,864	0/0:15,0:15:27.09:0,27,375
chr10	7898084	.	G	GCTGAATCAAACTTAGAGATAGACTCAAATAC	13469.38	PASS	AB=0.909;AC=9;AF=0.161;AN=56;BaseQRankSum=6.134;DP=602;FS=3.776;HRun=0;HaplotypeScore=438.6656;InbreedingCoeff=0.7901;MQ=95.48;MQ0=0;MQRankSum=-10.670;QD=264.11;ReadPosRankSum=3.988;VQSLOD=3.9230;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,0:5:9.03:644,9,0	0/0:14,0:14:42.14:0,42,3032	0/0:31,0:31:87.30:0,87,4261	0/0:26,0:26:75.19:0,75,3457	0/0:25,0:25:72.23:0,72,4126	0/0:33,0:33:96.30:0,96,6165	0/0:21,0:21:60.18:0,60,3636	0/0:43,0:43:99:0,123,6501	0/0:22,0:22:66.20:0,66,4342	0/0:24,0:24:72.24:0,72,4533	0/0:20,0:20:57.15:0,57,3399	0/0:24,0:24:72.21:0,72,4715	0/0:23,0:23:66.23:0,66,4911	0/0:20,0:20:60.21:0,60,4392	0/0:31,0:31:76.12:0,76,6121	0/0:29,0:29:87.28:0,87,5661	0/0:26,0:26:75.26:0,75,4874	0/0:13,0:13:33.11:0,33,2613	0/0:22,0:22:66.23:0,66,4537	0/0:27,0:27:81.26:0,81,5254	1/1:3,0:3:6.02:398,6,0	0/0:14,0:14:42.14:0,42,3142	0/0:22,0:22:66.23:0,66,4759	0/0:21,0:21:63.22:0,63,4776	0/0:20,0:20:60.20:0,60,4388	0/1:9,1:10:99:2916,0,216	1/1:21,3:28:72.25:8734,72,0	1/1:1,1:5:6.02:779,6,0
chr10	7899497	.	TACACACACAC	T	1439.46	PASS	AB=0.846;AC=20;AF=0.357;AN=56;BaseQRankSum=4.568;DP=475;FS=0.991;HRun=0;HaplotypeScore=150.1583;InbreedingCoeff=0.5664;MQ=61.11;MQ0=19;MQRankSum=-2.869;QD=8.94;ReadPosRankSum=-0.672;VQSLOD=2.3281;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:19:0:0,0,0	1/1:3,5:8:3.01:79,3,0	0/0:29,0:9:6.02:0,6,75	0/0:39,0:19:6.47:0,6,123	0/0:23,0:21:20.87:0,21,266	1/1:6,6:14:2.69:88,3,0	1/1:15,1:17:3.01:83,3,0	0/0:16,0:15:1.90:0,2,24	1/1:9,0:13:3.01:86,3,0	0/0:22,0:23:26.69:0,27,800	0/0:19,0:18:18.06:0,18,415	0/0:14,0:13:12.04:0,12,314	0/0:19,0:19:21.07:0,21,405	0/0:14,0:14:14.03:0,14,191	0/0:18,0:17:3.90:0,4,53	0/0:15,0:13:6:0,6,55	0/1:10,5:15:13.97:83,0,14	0/0:11,0:11:15.52:0,16,353	0/0:6,0:5:0.89:0,1,2	1/1:10,8:17:3.01:73,3,0	0/1:15,0:13:0:0,0,0	0/0:14,0:13:12.04:0,12,286	0/0:9,0:9:12.04:0,12,295	0/0:25,0:25:17.13:0,17,340	1/1:8,5:14:3.01:47,3,0	1/1:13,0:17:24.69:562,25,0	1/1:14,0:22:12.04:272,12,0	1/1:2,0:5:9.03:231,9,0
chr10	7899566	.	A	AGAGC	2324.38	PASS	AB=0.947;AC=26;AF=0.464;AN=56;BaseQRankSum=6.259;DP=686;FS=20.859;HRun=0;HaplotypeScore=202.1507;InbreedingCoeff=-0.0849;MQ=53.78;MQ0=37;MQRankSum=1.769;QD=5.17;ReadPosRankSum=8.540;VQSLOD=0.6457;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:5.92:0,6,92	0/1:12,0:9:14.16:14,0,28	0/0:39,0:23:24.62:0,25,609	0/0:49,0:27:60.36:0,60,913	0/0:30,0:27:25.12:0,25,411	0/1:19,0:19:18.41:139,0,18	0/1:14,0:14:15.65:16,0,40	0/0:27,0:25:48.55:0,49,574	0/1:30,0:30:69.82:164,0,70	0/1:18,14:29:99:259,0,125	1/1:31,0:29:6.43:139,6,0	1/1:28,0:28:38.50:442,39,0	1/1:29,0:28:36.12:419,36,0	0/0:13,18:31:4.38:0,4,21	0/0:25,0:22:1.66:0,2,274	0/0:21,0:18:31.84:0,32,452	1/1:16,0:16:5.14:135,5,0	0/1:3,0:9:8.31:60,0,8	0/1:18,0:18:0.13:0,0,194	0/1:23,0:21:41.29:41,0,98	0/1:11,0:9:8.09:8,0,76	0/1:26,0:26:12.62:112,0,13	1/1:8,15:22:0.69:6,1,0	1/1:27,0:28:4.73:293,5,0	0/1:16,0:15:21.75:59,0,22	0/1:34,0:33:58.41:58,0,415	0/1:31,0:29:99:114,0,209	0/1:13,0:11:13.01:13,0,93
chr10	7899613	.	GGATA	G	4017.57	PASS	AB=1.000;AC=25;AF=0.446;AN=56;BaseQRankSum=0.122;DP=579;FS=3.235;HRun=0;HaplotypeScore=216.7261;InbreedingCoeff=0.4143;MQ=66.87;MQ0=6;MQRankSum=1.742;QD=13.57;ReadPosRankSum=2.319;VQSLOD=3.1482;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:9.03:0,9,196	1/1:7,0:7:20.74:263,21,0	0/0:27,0:24:21.01:0,21,305	0/0:31,0:26:26.11:0,26,413	0/0:31,0:31:44.95:0,45,738	1/1:19,0:19:23.43:301,23,0	1/1:5,0:11:5.75:77,6,0	0/0:30,0:30:60.10:0,60,858	1/1:23,0:23:30.05:375,30,0	0/1:26,0:25:29.84:422,0,30	0/1:24,0:24:24.02:330,0,24	0/1:20,0:20:70.20:232,0,70	0/1:27,0:27:89.62:376,0,90	0/1:26,0:26:49.66:50,0,156	0/0:25,0:25:40.38:0,40,456	0/0:18,0:18:36.21:0,36,566	1/1:11,0:11:8.60:106,9,0	1/1:6,0:6:3.01:44,3,0	1/1:6,0:6:6.01:73,6,0	1/1:19,0:19:29.10:389,29,0	0/0:8,0:8:18.06:0,18,298	0/0:15,13:28:14.50:0,14,134	0/1:28,0:28:48.81:200,0,49	0/1:21,0:21:23.93:211,0,24	1/1:22,0:20:39.13:570,39,0	0/0:25,0:24:57.19:0,57,1151	0/0:34,0:34:54.18:0,54,902	0/0:11,0:10:18.33:0,18,267
chr10	7899624	.	TAG	T	271.03	PASS	AB=0.980;AC=14;AF=0.250;AN=56;BaseQRankSum=2.938;DP=609;FS=8.853;HRun=0;HaplotypeScore=220.9609;InbreedingCoeff=-0.1369;MQ=53.99;MQ0=11;MQRankSum=-1.427;QD=0.95;ReadPosRankSum=2.981;VQSLOD=1.2511;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:18,0:18:7.58:8,0,202	0/1:9,0:9:7.28:7,0,47	0/0:19,0:16:45.05:0,45,680	0/0:21,0:18:48.08:0,48,751	0/0:36,0:36:49.51:0,50,818	0/1:18,0:18:15.90:16,0,106	0/0:14,0:14:4.11:0,4,156	0/0:37,0:36:62.97:0,63,1547	0/1:29,0:29:9.43:9,0,266	0/1:24,2:25:99:144,0,352	0/0:20,1:21:14.20:0,14,310	0/1:19,1:20:22.78:23,0,329	0/1:26,2:28:25.61:26,0,446	0/0:23,2:25:13.81:0,14,535	0/0:26,0:26:54.46:0,54,688	0/0:19,0:18:39.05:0,39,611	0/0:13,0:13:3.84:0,4,44	1/1:9,0:9:12.29:110,12,0	0/0:6,0:5:7.35:0,7,81	0/1:20,0:20:6.34:6,0,117	0/0:11,0:9:21.07:0,21,390	0/1:28,0:28:9.34:9,0,482	0/1:30,2:32:1.30:1,0,327	0/1:21,0:21:41.21:41,0,179	0/1:27,0:25:19.68:20,0,186	0/0:25,0:24:67.10:0,67,1191	0/0:38,0:37:54.19:0,54,1037	0/0:12,0:11:25.61:0,26,362
chr10	7899626	.	G	GAT	1702.82	PASS	AB=0.969;AC=18;AF=0.321;AN=56;BaseQRankSum=10.970;DP=610;FS=0.000;HRun=0;HaplotypeScore=217.9866;InbreedingCoeff=-0.2227;MQ=50.90;MQ0=13;MQRankSum=-9.467;QD=4.95;ReadPosRankSum=0.933;VQSLOD=2.7771;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:18,1:18:8.13:8,0,155	1/1:8,1:9:5.77:137,6,0	0/0:17,0:14:35.06:0,35,424	0/0:18,0:15:35.71:0,36,471	0/0:38,0:37:42.57:0,43,572	0/1:18,0:18:3.74:186,0,4	0/1:13,0:13:10.52:11,0,65	0/0:37,0:36:47.75:0,48,1170	0/1:26,1:28:43.86:210,0,44	0/1:26,0:25:99:192,0,238	0/0:20,1:21:1.77:0,2,218	0/1:19,1:20:99:121,0,206	0/1:27,1:28:85.10:85,0,266	0/1:26,0:26:62.83:122,0,63	0/0:28,0:27:38.91:0,39,481	0/0:21,0:19:32.94:0,33,444	0/1:11,1:12:1.53:73,0,2	0/1:7,2:9:19.53:115,0,20	0/1:6,0:5:18.95:21,0,19	0/1:20,0:20:7.45:202,0,7	0/0:11,0:9:20.96:0,21,298	0/1:27,1:28:6.99:113,0,7	0/1:30,1:31:91.55:92,0,223	0/1:23,0:23:60.98:61,0,185	0/1:28,0:26:36.39:113,0,36	0/0:24,0:23:34.62:0,35,796	0/0:38,0:37:53.02:0,53,702	0/0:13,0:12:15.29:0,15,183
chr10	7899628	.	TAG	T	2433.25	PASS	AB=0.952;AC=22;AF=0.393;AN=56;BaseQRankSum=2.997;DP=609;FS=8.669;HRun=0;HaplotypeScore=209.8681;InbreedingCoeff=0.5332;MQ=50.10;MQ0=13;MQRankSum=1.869;QD=9.11;ReadPosRankSum=-1.170;VQSLOD=2.3103;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:19:10.42:0,10,211	1/1:4,5:9:26.15:266,26,0	0/0:18,0:14:35.06:0,35,503	0/0:18,0:15:38.72:0,39,635	0/0:37,0:36:49.50:0,49,800	1/1:7,10:17:28.33:328,28,0	1/1:12,1:13:16.83:92,17,0	0/0:40,0:39:99:0,109,1548	1/1:13,12:25:38.43:371,38,0	0/1:27,0:26:97.25:97,0,178	0/0:22,0:22:4.92:0,5,170	0/1:20,0:20:44.74:45,0,181	0/1:28,0:28:2.95:3,0,184	0/0:26,0:25:11.14:0,11,262	0/0:26,0:25:57.43:0,57,658	0/0:21,0:19:44.97:0,45,657	1/1:9,4:13:16.58:167,17,0	1/1:9,0:9:12.21:72,12,0	0/1:3,2:4:8.15:83,0,8	1/1:6,14:20:43.35:469,43,0	0/0:11,0:9:21.07:0,21,388	0/0:27,0:27:5.52:0,6,247	0/1:30,0:30:52.80:53,0,236	0/1:23,0:23:30.95:31,0,110	1/1:10,18:28:55.82:557,56,0	0/0:25,0:24:72.19:0,72,1223	0/0:38,0:37:54.19:0,54,1027	0/0:10,0:12:20.37:0,20,288
chr10	7899630	.	G	GAT	3138.02	PASS	AB=1.000;AC=26;AF=0.464;AN=56;BaseQRankSum=4.288;DP=601;FS=6.119;HRun=0;HaplotypeScore=204.4911;InbreedingCoeff=0.5459;MQ=47.57;MQ0=13;MQRankSum=1.858;QD=9.15;ReadPosRankSum=-1.107;VQSLOD=2.7272;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:19:6.77:0,7,123	0/1:9,0:9:0.86:1,0,24	0/0:14,0:10:21.01:0,21,268	0/0:15,0:12:29.12:0,29,370	0/0:37,0:36:39.59:0,40,531	0/1:19,0:19:12.65:13,0,18	0/1:16,0:16:1.42:33,0,1	0/0:38,0:37:79.08:0,79,1125	0/1:23,0:23:0.75:1,0,36	1/1:20,6:25:44.41:653,44,0	1/1:16,5:21:37.88:371,38,0	1/1:14,6:20:30.27:305,30,0	1/1:21,9:30:25.29:428,25,0	1/1:16,10:25:40.03:510,40,0	0/0:24,0:23:30.07:0,30,403	0/0:21,0:19:38.86:0,39,487	0/1:12,0:12:5.01:5,0,8	1/1:9,0:9:12.21:72,12,0	0/1:6,0:5:10.15:10,0,41	0/1:22,0:22:11.41:11,0,38	0/0:12,0:10:20.79:0,21,272	1/1:18,9:27:28.89:443,29,0	1/1:20,8:28:27.84:283,28,0	1/1:20,3:23:23.38:189,23,0	0/1:26,0:24:8.55:9,0,58	0/0:26,0:25:66.32:0,66,892	0/0:38,0:37:52.41:0,52,676	0/0:13,0:12:15.91:0,16,167
chr10	7899634	.	GAT	G	4301.70	PASS	AB=0.871;AC=36;AF=0.643;AN=56;BaseQRankSum=4.806;DP=610;FS=1.296;HRun=0;HaplotypeScore=197.1812;InbreedingCoeff=0.0618;MQ=46.79;MQ0=13;MQRankSum=-0.220;QD=8.47;ReadPosRankSum=-1.188;VQSLOD=4.1972;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:19,3:21:29.97:30,0,143	1/1:5,5:10:28.35:281,28,0	0/0:13,0:9:21.07:0,21,316	0/0:16,0:13:33.10:0,33,456	0/0:36,0:35:46.46:0,46,570	1/1:11,9:20:34.39:339,34,0	1/1:15,1:16:20.69:110,21,0	0/1:25,14:38:99:425,0,884	1/1:12,12:24:38.36:382,38,0	1/1:23,3:25:27.37:277,27,0	0/1:16,2:18:1.22:40,0,1	1/1:20,1:21:7.91:148,8,0	0/1:22,6:28:9.67:89,0,10	0/1:22,2:23:1.11:38,0,1	0/1:22,2:23:40.43:40,0,333	0/1:16,6:20:83.57:84,0,414	1/1:5,8:13:12.47:116,12,0	1/1:8,2:10:14.25:139,14,0	0/1:5,2:6:46.31:111,0,46	1/1:9,13:22:44.31:416,44,0	0/1:9,4:11:21.79:22,0,261	1/1:25,1:26:0.90:42,1,0	0/1:27,2:29:13.28:124,0,13	1/1:19,2:21:1.69:81,2,0	1/1:11,18:29:63.19:598,63,0	0/1:31,0:30:99:333,0,831	0/0:37,0:36:54.01:0,54,713	0/1:13,0:12:35.95:36,0,192
chr10	7899636	.	T	TATAGATAGATAGATAG	4712.16	PASS	AB=0.904;AC=38;AF=0.679;AN=56;BaseQRankSum=-10.417;DP=626;FS=28.782;HRun=0;HaplotypeScore=319.1312;InbreedingCoeff=-0.0845;MQ=47.20;MQ0=13;MQRankSum=5.419;QD=8.03;ReadPosRankSum=-6.321;VQSLOD=1.3869;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:21:6.54:152,7,0	0/1:9,0:9:18.45:18,0,314	0/0:12,0:9:6.02:0,6,91	0/0:14,0:11:6.79:0,7,105	1/1:25,0:35:8.79:251,9,0	0/1:21,0:21:46.13:46,0,310	0/1:16,0:16:22.96:23,0,107	1/1:40,0:39:57.12:880,57,0	0/1:23,0:23:30.02:30,0,328	1/1:21,0:26:17.16:336,17,0	1/1:13,0:18:4.87:151,5,0	0/1:18,0:24:2.93:130,0,3	0/1:19,0:28:20.41:133,0,20	0/1:15,0:24:29.59:114,0,30	1/1:12,0:22:9.03:129,9,0	1/1:19,0:20:12.03:155,12,0	0/0:12,0:12:8.10:0,8,161	1/1:10,0:10:13.53:113,14,0	0/1:7,0:6:41.12:41,0,104	0/1:24,0:24:68.53:69,0,511	1/1:13,0:11:3.01:43,3,0	0/1:17,0:26:31.08:77,0,31	1/1:20,0:28:6.91:144,7,0	0/1:17,0:21:3.98:152,0,4	0/1:29,0:27:43:43,0,835	1/1:21,0:32:39.08:864,39,0	1/1:25,15:47:6.02:356,6,0	1/1:6,4:13:10.53:264,11,0
chr10	7902082	.	CT	C	11231.60	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=7.954;DP=675;FS=0.392;HRun=10;HaplotypeScore=74.4354;InbreedingCoeff=0.9708;MQ=75.44;MQ0=0;MQRankSum=-2.128;QD=20.72;ReadPosRankSum=3.579;VQSLOD=5.6764;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,27:35:65.70:639,66,0	1/1:1,12:13:32.99:287,33,0	0/0:18,0:17:19.20:0,19,320	0/0:16,0:16:6.29:0,6,205	0/0:26,1:27:48.18:0,48,743	1/1:1,25:27:74.02:631,74,0	1/1:0,22:22:62.99:547,63,0	0/0:27,1:29:60.16:0,60,657	1/1:2,15:17:41.99:365,42,0	1/1:6,29:35:59.39:729,59,0	1/1:5,26:33:79.05:663,79,0	1/1:2,18:20:50.99:443,51,0	1/1:4,19:23:41.98:365,42,0	1/1:4,25:29:65.98:573,66,0	0/0:24,1:25:43.02:0,43,647	0/0:17,0:18:50.97:0,51,545	1/1:0,21:21:56.99:495,57,0	1/1:6,19:25:60.84:518,61,0	1/1:8,13:21:38.98:339,39,0	1/1:4,22:26:65.98:573,66,0	1/1:3,15:18:41.99:365,42,0	1/1:4,23:27:68.94:592,69,0	1/1:3,22:25:65.98:573,66,0	1/1:3,35:38:71.80:852,72,0	1/1:5,14:18:11.77:331,12,0	1/1:6,22:28:65.97:572,66,0	1/1:5,27:32:68.97:599,69,0	1/1:0,8:8:21:182,21,0
chr10	7902696	.	T	TACAG	12620.93	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=17.516;DP=561;FS=2.749;HRun=0;HaplotypeScore=130.1797;InbreedingCoeff=0.9600;MQ=68.97;MQ0=0;MQRankSum=-18.013;QD=58.43;ReadPosRankSum=1.621;VQSLOD=6.7269;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,13:16:38.94:799,39,0	1/1:1,7:8:24.07:483,24,0	0/0:13,0:13:39.02:0,39,696	0/0:11,0:11:21.04:0,21,338	0/0:26,0:26:78.26:0,78,1570	1/1:0,28:30:87.30:1903,87,0	1/1:2,15:17:48.16:1048,48,0	0/0:37,0:37:93.30:0,93,1834	1/1:0,10:13:36.12:777,36,0	0/0:33,0:33:96.33:0,96,1975	0/0:26,0:26:78.26:0,78,1588	0/0:23,0:23:69.22:0,69,1409	0/0:19,0:19:54.19:0,54,1133	0/0:31,0:31:93.29:0,93,1858	0/0:23,0:23:69.24:0,69,1448	0/0:22,0:22:60.21:0,60,1246	1/1:4,6:10:17.49:371,17,0	0/0:20,0:20:53.94:0,54,1041	1/1:3,17:20:47.25:1217,47,0	1/1:2,22:24:72.25:1553,72,0	1/1:3,7:10:15.94:419,16,0	0/0:25,0:25:75.26:0,75,1574	0/0:20,0:20:54.17:0,54,1095	0/0:16,0:16:48.16:0,48,1007	1/1:1,13:14:42.14:874,42,0	1/1:3,18:21:0.25:1190,0,0	1/1:4,22:27:62.16:1591,62,0	1/1:0,6:6:18.06:396,18,0
chr10	7902698	.	T	TC	4968.42	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=18.799;DP=554;FS=3.229;HRun=0;HaplotypeScore=124.7113;InbreedingCoeff=0.9949;MQ=69.96;MQ0=0;MQRankSum=-17.844;QD=23.55;ReadPosRankSum=2.131;VQSLOD=5.9491;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,13:16:41.68:326,42,0	1/1:0,7:7:20.98:178,21,0	0/0:15,0:15:25.24:0,25,444	0/0:10,0:10:21.02:0,21,239	0/0:27,0:27:78.12:0,78,1012	1/1:2,28:30:86.71:727,87,0	1/1:2,15:17:44.42:374,44,0	0/0:37,0:37:99:0,102,1299	1/1:3,11:14:38.93:326,39,0	0/0:33,0:33:96.27:0,96,1251	0/0:24,0:24:72.24:0,72,1002	0/0:23,0:23:69.18:0,69,925	0/0:20,0:20:57.18:0,57,780	0/0:30,0:30:90.25:0,90,1178	0/0:24,0:24:72.22:0,72,974	0/0:21,0:21:63.19:0,63,848	1/1:4,6:10:26.53:203,27,0	0/0:18,0:18:51.16:0,51,695	1/1:1,17:18:54.06:505,54,0	1/1:3,22:25:68.64:577,69,0	1/1:2,7:9:23.35:161,23,0	0/0:25,0:25:75.25:0,75,1047	0/0:19,0:19:57.17:0,57,766	0/0:17,0:17:51.13:0,51,689	1/1:2,13:15:44.93:376,45,0	1/1:1,18:19:15.11:439,15,0	1/1:3,22:25:74.85:620,75,0	1/1:0,6:6:17.99:157,18,0
chr10	7903104	.	CCACACA	C	2946.09	PASS	AB=0.995;AC=18;AF=0.391;AN=46;BaseQRankSum=-2.277;DP=593;FS=1.400;HRun=0;HaplotypeScore=129.2659;InbreedingCoeff=0.4003;MQ=52.41;MQ0=40;MQRankSum=1.346;QD=11.60;ReadPosRankSum=0.558;VQSLOD=2.9195;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:31,0:31:36.94:625,37,0	0/1:9,0:9:21.07:21,0,41	./.	./.	0/0:13,0:13:9.03:0,9,213	0/0:25,0:25:19.80:0,20,211	0/1:32,0:29:62.06:62,0,136	0/0:26,0:25:11.99:0,12,171	0/1:20,0:20:90.90:92,0,91	1/1:26,0:23:24.23:466,24,0	./.	1/1:19,1:21:30.05:446,30,0	1/1:13,0:16:18.04:316,18,0	1/1:12,0:20:12.03:194,12,0	0/0:28,0:26:21.07:0,21,461	0/0:24,0:23:33.11:0,33,762	0/1:17,0:16:30.64:31,0,67	1/1:11,0:10:15.05:255,15,0	0/0:15,0:16:15.30:0,15,149	0/1:12,0:11:11.07:11,0,30	0/0:32,0:29:12.04:0,12,279	./.	./.	0/1:30,0:31:8.13:599,0,8	0/0:12,0:11:11.74:0,12,172	0/0:23,0:23:29.44:0,29,1261	0/0:8,0:8:3.48:0,3,53	0/0:9,0:6:9:0,9,178
chr10	7903139	.	CACACACAGAGAGAG	C	3563.81	PASS	AB=0.963;AC=13;AF=0.260;AN=50;BaseQRankSum=-2.753;DP=506;FS=0.501;HRun=0;HaplotypeScore=173.5598;InbreedingCoeff=0.0851;MQ=45.47;MQ0=45;MQRankSum=4.079;QD=14.20;ReadPosRankSum=0.518;VQSLOD=2.7371;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:37,0:35:99:581,0,116	0/1:8,0:8:1.84:2,0,136	./.	./.	0/0:16,0:14:9.03:0,9,213	0/0:25,0:23:28.86:0,29,438	0/1:30,0:24:86.24:86,0,274	0/0:23,0:20:23.05:0,23,297	0/1:17,0:17:90.82:91,0,113	0/1:11,11:17:26.32:443,0,26	0/0:14,0:13:0.89:0,1,2	1/1:24,0:22:39.08:615,39,0	0/1:22,0:22:20.53:635,0,21	1/1:16,0:15:5.52:184,6,0	0/0:22,0:18:21.07:0,21,480	0/0:23,0:22:37.84:0,38,821	0/1:19,0:17:15.43:15,0,222	0/1:14,0:12:0.82:278,0,1	0/0:23,0:19:34.44:0,34,403	0/0:8,0:7:8.79:0,9,63	0/0:16,0:14:12.51:0,13,280	0/0:14,0:13:9.03:0,9,142	./.	0/1:42,0:40:45.69:634,0,46	0/0:12,0:11:15.22:0,15,248	0/0:32,0:32:50.42:0,50,1914	0/0:5,0:5:5.14:0,5,173	0/0:9,0:5:11.99:0,12,287
chr10	7903193	.	G	GAA	1289.31	PASS	AB=0.608;AC=9;AF=0.161;AN=56;BaseQRankSum=7.087;DP=625;FS=1.902;HRun=1;HaplotypeScore=99.3800;InbreedingCoeff=0.8006;MQ=60.96;MQ0=31;MQRankSum=2.037;QD=12.16;ReadPosRankSum=2.210;VQSLOD=0.8715;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:29:45.73:378,46,0	0/0:16,0:16:39.37:0,39,293	0/0:33,0:17:41.50:0,42,361	0/0:35,0:16:39.15:0,39,361	0/0:30,0:28:53.83:0,54,429	0/0:30,0:27:51.16:0,51,442	0/0:26,0:26:50.86:0,51,435	0/0:34,0:32:86.51:0,87,732	0/0:19,0:19:50.96:0,51,431	0/0:17,0:17:38.75:0,39,357	0/0:10,0:10:26.29:0,26,199	0/0:19,0:18:41.67:0,42,346	0/0:19,0:19:40.73:0,41,321	0/0:13,0:13:26.96:0,27,221	0/0:33,0:30:63.07:0,63,497	0/0:21,0:20:48.77:0,49,393	0/0:17,0:16:42.43:0,42,363	0/0:14,0:13:32.87:0,33,272	0/0:30,0:27:76.14:0,76,650	0/0:16,0:16:32.33:0,32,256	1/1:9,0:8:20.98:182,21,0	0/0:25,0:25:53.56:0,54,460	0/0:13,0:13:29.96:0,30,248	0/0:28,0:26:50.81:0,51,415	0/0:20,0:20:41.89:0,42,347	0/1:11,20:30:72.69:407,0,73	1/1:19,0:18:18.60:276,19,0	1/1:17,0:14:1.43:200,1,0
chr10	7906461	.	ATGTGTGTG	A	4002.16	PASS	AC=16;AF=0.296;AN=54;BaseQRankSum=1.940;DP=683;FS=0.000;HRun=0;HaplotypeScore=190.6880;InbreedingCoeff=0.8458;MQ=60.27;MQ0=8;MQRankSum=-8.252;QD=20.84;ReadPosRankSum=-0.215;VQSLOD=2.6985;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:40:10.83:0,11,170	1/1:4,9:15:21.07:475,21,0	./.	0/0:40,0:21:6:0,6,51	0/0:13,0:19:33.11:0,33,1050	1/1:8,16:23:33.11:796,33,0	1/1:5,11:16:12.04:304,12,0	0/0:28,0:28:34.58:0,35,588	1/1:16,16:32:12.63:677,13,0	0/0:20,0:19:9.50:0,10,133	0/0:17,0:17:8.41:0,8,83	0/0:33,0:33:25.50:0,26,356	0/0:37,0:37:28.90:0,29,352	0/0:27,0:27:18.01:0,18,188	0/0:21,0:24:39.11:0,39,1106	0/0:22,0:25:48.11:0,48,1487	1/1:14,13:28:0.91:387,1,0	0/0:20,0:20:21.06:0,21,264	1/1:17,9:27:17.55:557,18,0	1/1:7,15:22:19.78:456,20,0	0/0:36,0:35:21.81:0,22,398	0/0:18,0:18:9:0,9,88	0/0:18,0:18:6.02:0,6,71	0/0:28,0:28:17.09:0,17,387	1/1:10,17:26:8.22:350,8,0	0/0:14,0:14:17.73:0,18,229	0/0:12,0:14:15.05:0,15,404	0/0:3,0:4:9:0,9,98
chr10	7906493	.	GTGTGTA	G	2531.72	PASS	AB=1.000;AC=26;AF=0.464;AN=56;BaseQRankSum=9.308;DP=692;FS=8.731;HRun=0;HaplotypeScore=171.7044;InbreedingCoeff=-0.0627;MQ=50.88;MQ0=17;MQRankSum=-4.409;QD=5.33;ReadPosRankSum=5.960;VQSLOD=1.6220;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:31:74.79:95,0,75	0/1:15,0:15:22.56:150,0,23	0/0:47,0:18:39.47:0,39,393	0/0:45,0:18:30.81:0,31,372	0/0:22,0:22:50.66:0,51,918	0/1:27,0:25:53.91:239,0,54	0/1:22,0:22:66.17:66,0,178	0/0:30,0:30:44.50:0,44,790	0/1:24,0:24:63.77:188,0,64	1/1:22,1:22:31.65:391,32,0	0/0:18,0:18:0.71:0,1,2	1/1:32,1:33:30.46:188,30,0	1/1:22,1:23:9.95:137,10,0	1/1:32,1:32:7.89:36,8,0	0/0:25,0:24:53.65:0,54,1028	0/0:27,0:26:47.13:0,47,1318	0/1:29,0:29:99:121,0,134	1/1:22,0:22:22.10:101,22,0	0/1:18,0:17:74.07:167,0,74	0/1:33,0:33:99:108,0,279	0/1:29,0:28:99:163,0,161	1/1:17,0:17:3.63:14,4,0	0/1:16,0:16:5.32:138,0,5	0/1:22,0:22:47.47:160,0,47	0/1:29,0:28:96.42:96,0,141	0/1:18,0:18:99:104,0,162	0/1:9,0:9:47.86:48,0,199	0/0:3,0:3:6.01:0,6,64
chr10	7906495	.	GTGTA	G	3706.13	PASS	AB=0.997;AC=30;AF=0.536;AN=56;BaseQRankSum=8.724;DP=693;FS=8.471;HRun=0;HaplotypeScore=153.1169;InbreedingCoeff=0.0587;MQ=51.98;MQ0=17;MQRankSum=-5.206;QD=7.53;ReadPosRankSum=6.145;VQSLOD=1.7736;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:32,0:30:26.10:98,0,26	0/1:15,0:15:25.44:57,0,25	0/0:49,0:21:28.12:0,28,433	0/0:46,0:19:30.81:0,31,372	0/0:23,0:23:39.77:0,40,683	0/1:27,0:25:63.83:95,0,64	0/1:23,0:23:9.02:9,0,201	0/0:28,0:28:47.83:0,48,718	0/1:25,0:25:75.95:76,0,105	1/1:22,1:22:58.57:505,59,0	1/1:4,13:17:2.92:18,3,0	1/1:3,30:33:33.11:601,33,0	1/1:5,18:23:11.99:417,12,0	1/1:3,28:30:8.79:170,9,0	0/0:24,1:24:8.86:0,9,658	0/0:27,0:26:61.57:0,62,1056	0/1:30,0:30:22.17:22,0,165	1/1:2,20:22:24.03:413,24,0	0/1:18,0:17:61.32:61,0,89	0/1:34,0:34:23.51:24,0,303	0/1:28,0:28:61.90:168,0,62	1/1:4,13:17:3.48:57,3,0	1/1:13,3:16:29.49:305,29,0	1/1:16,5:21:8:405,8,0	0/1:29,0:28:30.63:31,0,162	0/1:18,0:18:84.88:105,0,85	0/1:9,0:9:68.89:69,0,74	0/0:2,0:3:5.96:0,6,44
chr10	7906497	.	GTA	G	2371.09	PASS	AB=1.000;AC=28;AF=0.500;AN=56;BaseQRankSum=4.899;DP=681;FS=4.250;HRun=0;HaplotypeScore=140.0673;InbreedingCoeff=0.6876;MQ=52.39;MQ0=17;MQRankSum=1.062;QD=7.48;ReadPosRankSum=2.638;VQSLOD=3.5105;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:33,0:31:8.76:192,9,0	0/1:16,0:16:5.29:5,0,71	0/0:49,0:21:28.63:0,29,433	0/0:43,0:17:30.81:0,31,372	0/0:21,1:22:8.44:0,8,438	0/0:27,0:25:13.82:0,14,116	0/0:25,0:25:34.78:0,35,290	0/0:28,0:28:44.79:0,45,628	0/0:25,0:25:28.99:0,29,171	1/1:22,0:21:60.22:488,60,0	1/1:16,1:17:2.92:18,3,0	1/1:32,0:32:32.91:263,33,0	1/1:21,0:21:12.03:176,12,0	1/1:29,0:28:8.61:72,9,0	0/0:26,0:25:26.49:0,26,494	0/0:26,0:25:33.57:0,34,703	0/0:28,0:30:25.01:0,25,204	1/1:22,0:22:23.90:186,24,0	0/1:17,0:16:8.60:9,0,125	0/0:33,0:33:29.35:0,29,356	1/1:29,0:28:22.06:268,22,0	1/1:16,0:16:3.46:25,3,0	1/1:15,0:15:29.26:240,29,0	1/1:19,2:21:24.49:335,24,0	0/0:30,0:28:24.59:0,25,241	1/1:15,0:15:13.42:219,13,0	0/1:9,0:9:7.75:76,0,8	0/1:3,0:3:5.27:5,0,8
chr10	7907957	.	TA	T	11405	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=4.787;DP=689;FS=7.284;HRun=9;HaplotypeScore=91.0930;InbreedingCoeff=0.9971;MQ=68.15;MQ0=1;MQRankSum=-1.820;QD=23.71;ReadPosRankSum=2.655;VQSLOD=5.3333;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,34:35:90.05:824,90,0	0/0:12,0:12:33.09:0,33,372	0/0:15,1:16:14.65:0,15,411	0/0:17,0:17:39.11:0,39,440	1/1:5,29:35:86.07:775,86,0	0/0:20,0:20:57.16:0,57,649	0/0:21,1:22:32.71:0,33,630	1/1:3,31:34:93.05:850,93,0	0/0:16,0:16:45.12:0,45,510	1/1:2,21:23:63.02:572,63,0	1/1:1,27:28:75.04:686,75,0	1/1:3,26:29:75.04:687,75,0	1/1:2,21:23:57.03:522,57,0	1/1:0,19:19:57.03:522,57,0	1/1:3,24:27:40.42:624,40,0	1/1:4,28:32:81.04:741,81,0	0/0:33,0:33:90.26:0,90,1029	1/1:3,13:16:39.02:357,39,0	0/0:15,0:15:39.08:0,39,429	0/0:26,0:26:63.18:0,63,719	1/1:1,25:26:72.04:659,72,0	1/1:4,28:32:78.04:714,78,0	1/1:1,27:28:72.04:659,72,0	1/1:1,15:16:42.02:384,42,0	0/0:31,0:31:90.24:0,90,1017	1/1:3,34:37:99:916,102,0	1/1:3,26:30:74.07:665,74,0	1/1:0,10:10:27.01:247,27,0
chr10	7908679	.	TCA	T	5606	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=13.202;DP=586;FS=0.000;HRun=0;HaplotypeScore=67.1449;InbreedingCoeff=0.9999;MQ=88.19;MQ0=0;MQRankSum=-1.851;QD=38.66;ReadPosRankSum=4.165;VQSLOD=6.8208;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,129,2325	1/1:0,14:14:42.14:619,42,0	0/0:26,0:26:72.69:0,73,1273	0/0:20,0:20:51.12:0,51,822	0/0:19,0:19:57.18:0,57,1035	1/1:0,14:14:36.12:530,36,0	1/1:0,12:12:33.11:486,33,0	0/0:40,0:40:99:0,108,2014	1/1:0,21:21:57.19:840,57,0	0/0:19,0:19:57.20:0,57,1063	0/0:20,0:20:54.19:0,54,1011	0/0:23,0:23:69.24:0,69,1285	0/0:29,0:29:87.30:0,87,1629	0/0:22,0:22:60.21:0,60,1102	0/0:21,0:21:63.22:0,63,1173	0/0:22,0:22:63.22:0,63,1164	1/1:0,23:23:54.18:795,54,0	0/0:12,0:12:36.12:0,36,674	1/1:1,20:21:60.16:840,60,0	1/1:1,19:20:54.18:789,54,0	0/0:26,0:26:75.24:0,75,1372	0/0:20,0:20:54.18:0,54,993	0/0:14,0:14:42.14:0,42,772	0/0:14,0:14:39.13:0,39,708	1/1:1,19:20:48.16:707,48,0	0/0:21,0:21:60.21:0,60,1116	0/0:17,0:17:51.17:0,51,949	0/0:13,0:13:39.13:0,39,730
chr10	7908990	.	GC	G	5176.11	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=8.783;DP=512;FS=12.182;HRun=7;HaplotypeScore=71.5696;InbreedingCoeff=0.9906;MQ=80.21;MQ0=0;MQRankSum=-1.055;QD=24.19;ReadPosRankSum=2.700;VQSLOD=4.5328;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:96.24:0,96,1153	1/1:4,9:13:27.06:275,27,0	0/0:24,0:22:37.78:0,38,543	0/0:31,0:29:38.30:0,38,479	1/1:1,12:13:33.07:334,33,0	1/1:2,21:23:54.12:551,54,0	1/1:1,15:16:42.09:428,42,0	1/1:4,14:18:39.04:381,39,0	1/1:1,14:15:42.09:428,42,0	0/0:18,1:19:20.55:0,21,561	0/0:16,0:16:45.14:0,45,565	0/0:18,0:18:48.12:0,48,566	0/0:16,0:16:42.13:0,42,523	0/0:13,0:13:36.08:0,36,413	1/1:8,18:26:48.08:490,48,0	1/1:0,20:20:42.09:428,42,0	1/1:1,33:34:90.21:918,90,0	0/0:35,0:35:90.25:0,90,1113	1/1:1,12:13:36.07:363,36,0	1/1:1,8:9:24.05:245,24,0	0/0:13,0:13:36.12:0,36,452	0/0:12,0:12:33.08:0,33,390	0/0:11,0:11:33.11:0,33,413	0/0:16,0:16:42.13:0,42,527	1/1:1,13:14:33.07:335,33,0	0/0:21,0:21:54.17:0,54,676	0/0:16,0:16:48.11:0,48,566	0/0:3,0:3:9.03:0,9,113
chr10	7909069	.	GC	G	6611.29	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=2.981;DP=565;FS=1.091;HRun=1;HaplotypeScore=66.5487;InbreedingCoeff=0.9968;MQ=88.51;MQ0=0;MQRankSum=-1.905;QD=39.35;ReadPosRankSum=1.385;VQSLOD=5.5164;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,102,1607	0/0:13,0:13:36.12:0,36,575	0/0:21,0:21:63.21:0,63,969	0/0:24,0:24:43.73:0,44,945	0/0:20,0:20:60.14:0,60,886	0/0:18,0:18:45.14:0,45,696	0/0:17,0:17:51.16:0,51,789	0/0:20,0:20:57.10:0,57,834	0/0:19,0:19:57.18:0,57,888	1/1:0,22:22:66.20:905,66,0	1/1:1,9:10:21.07:294,21,0	1/1:0,24:24:66.22:923,66,0	1/1:0,11:11:33.11:461,33,0	1/1:0,18:18:51.17:713,51,0	0/0:24,0:24:66.22:0,66,1050	0/0:14,0:14:42.14:0,42,670	0/0:44,0:44:99:0,123,1938	1/1:0,35:35:96.32:1343,96,0	0/0:21,0:21:63.19:0,63,959	0/0:17,0:17:49.98:0,50,770	0/0:24,0:24:72.25:0,72,1148	1/1:0,15:15:45.15:629,45,0	1/1:0,17:17:48.16:671,48,0	1/1:0,16:16:48.16:671,48,0	0/0:12,0:12:33.10:0,33,503	0/0:19,1:20:18.23:0,18,870	0/0:29,0:29:84.29:0,84,1343	0/0:6,0:6:18.06:0,18,288
chr10	7909246	.	A	AG	1129.80	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=10.838;DP=537;FS=5.160;HRun=0;HaplotypeScore=115.9992;InbreedingCoeff=0.9986;MQ=99.16;MQ0=1;MQRankSum=-10.794;QD=21.32;ReadPosRankSum=1.794;VQSLOD=4.9465;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,129,1789	0/0:11,0:11:33.11:0,33,461	0/0:29,0:28:77.97:0,78,976	0/0:31,0:31:90.16:0,90,1181	1/1:2,18:20:56.78:459,57,0	0/0:17,0:17:51.16:0,51,696	0/0:17,0:17:51.17:0,51,713	1/1:1,6:7:21.03:199,21,0	0/0:14,0:14:39.13:0,39,545	0/0:18,0:18:48.15:0,48,654	0/0:17,0:17:48.15:0,48,653	0/0:16,0:16:48.16:0,48,671	0/0:13,0:13:36.10:0,36,472	0/0:26,0:26:75.25:0,75,1048	1/1:1,13:14:41.89:344,42,0	1/1:0,12:12:35.93:287,36,0	0/0:21,0:21:63.21:0,63,880	0/0:15,0:15:45.15:0,45,629	0/0:12,0:12:36.12:0,36,503	0/0:15,0:15:45.14:0,45,614	0/0:28,0:28:81.27:0,81,1132	0/0:19,0:19:54.14:0,54,733	0/0:16,0:16:48.13:0,48,651	0/0:16,0:16:48.15:0,48,654	0/0:29,0:29:84.28:0,84,1175	0/0:20,0:20:60.19:0,60,823	0/0:30,0:30:90.30:0,90,1258	0/0:11,0:11:33.11:0,33,461
chr10	7909247	.	ATACACC	A	2020.61	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=11.690;DP=540;FS=5.200;HRun=0;HaplotypeScore=168.9920;InbreedingCoeff=0.9975;MQ=100.12;MQ0=1;MQRankSum=-10.698;QD=38.86;ReadPosRankSum=2.013;VQSLOD=3.3032;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,129,4655	0/0:11,0:11:33.11:0,33,1195	0/0:29,0:29:87.23:0,87,2701	0/0:32,0:32:96.33:0,96,3224	1/1:2,18:20:57.14:774,57,0	0/0:18,0:18:54.19:0,54,1956	0/0:17,0:17:51.18:0,51,1919	1/1:0,6:6:18.06:276,18,0	0/0:15,0:15:45.15:0,45,1640	0/0:17,0:17:47.67:0,48,1773	0/0:16,0:16:48.16:0,48,1733	0/0:17,0:17:51.16:0,51,1795	0/0:13,0:13:36.12:0,36,1354	0/0:26,0:26:78.24:0,78,2782	1/1:1,13:14:42.12:598,42,0	1/1:0,12:12:36.12:532,36,0	0/0:21,0:21:63.22:0,63,2269	0/0:15,0:15:45.15:0,45,1693	0/0:12,0:12:36.12:0,36,1296	0/0:15,0:15:45.14:0,45,1391	0/0:28,0:28:84.29:0,84,2929	0/0:19,0:19:54.19:0,54,1868	0/0:15,0:15:45.15:0,45,1679	0/0:17,0:17:51.18:0,51,1858	0/0:29,0:29:87.30:0,87,3251	0/0:19,0:19:57.19:0,57,2013	0/0:32,0:32:96.33:0,96,3467	0/0:11,0:11:33.11:0,33,1206
chr10	7909255	.	GCCACTTGC	G	3533.30	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=11.536;DP=536;FS=7.474;HRun=0;HaplotypeScore=189.3818;InbreedingCoeff=0.9971;MQ=98.64;MQ0=0;MQRankSum=-11.232;QD=72.11;ReadPosRankSum=2.145;VQSLOD=3.1470;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,123,5445	0/0:12,0:12:32.84:0,33,1187	0/0:24,0:24:72.11:0,72,2799	0/0:34,0:34:96.28:0,96,3581	1/1:0,18:18:54.05:1212,54,0	0/0:19,0:19:57.20:0,57,1986	0/0:18,0:18:54.19:0,54,1779	1/1:0,6:6:18.06:454,18,0	0/0:15,0:15:45.15:0,45,1646	0/0:19,0:19:56.22:0,56,1714	0/0:18,0:18:54.19:0,54,1823	0/0:19,0:19:57.20:0,57,1942	0/0:13,0:13:39.09:0,39,1335	0/0:27,0:27:81.28:0,81,2882	1/1:0,13:13:39.13:970,39,0	1/1:0,12:12:36.12:897,36,0	0/0:20,0:20:60.21:0,60,2084	0/0:19,0:19:54.19:0,54,1821	0/0:12,0:12:36.12:0,36,1288	0/0:9,0:9:27.09:0,27,961	0/0:28,0:28:81.28:0,81,2790	0/0:16,0:16:48.15:0,48,1505	0/0:15,0:15:45.15:0,45,1470	0/0:17,0:17:51.18:0,51,1762	0/0:31,0:31:93.29:0,93,3094	0/0:19,0:19:54.19:0,54,1861	0/0:31,0:31:90.30:0,90,3162	0/0:10,0:10:30.10:0,30,967
chr10	7911120	.	C	CT	6180.98	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-9.939;DP=651;FS=0.666;HRun=8;HaplotypeScore=61.3838;InbreedingCoeff=0.9921;MQ=82.37;MQ0=0;MQRankSum=-0.619;QD=29.43;ReadPosRankSum=0.607;VQSLOD=4.9402;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:81:0,81,730	0/0:6,0:6:18.01:0,18,165	0/0:22,0:22:11.30:0,11,303	0/0:15,0:14:21.18:0,21,231	0/0:26,1:27:40.42:0,40,624	0/0:27,0:27:63:0,63,571	0/0:20,0:20:57.03:0,57,522	0/0:35,0:35:83.99:0,84,753	0/0:22,0:22:60.01:0,60,544	1/1:3,23:26:66.20:762,66,0	1/1:1,24:25:69.20:796,69,0	1/1:1,16:17:42.12:485,42,0	1/1:1,21:22:57.17:658,57,0	1/1:3,24:27:66.16:746,66,0	0/0:21,0:21:60.01:0,60,544	0/0:28,0:28:78.03:0,78,714	0/0:17,0:17:48:0,48,432	1/1:1,24:25:63.19:727,63,0	0/0:24,0:24:62.34:0,62,575	0/0:30,1:31:49.42:0,49,707	0/0:18,0:18:48.03:0,48,439	1/1:2,26:28:69.20:796,69,0	1/1:2,20:22:57.17:658,57,0	1/1:1,17:18:48.14:554,48,0	0/0:25,0:25:72.02:0,72,654	0/0:27,0:27:69:0,69,628	0/0:39,0:39:99:0,108,963	0/0:8,0:8:24.01:0,24,220
chr10	7911289	.	AGTTATGGATCGG	A	13985.98	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=16.491;DP=664;FS=1.592;HRun=0;HaplotypeScore=241.0126;InbreedingCoeff=0.9870;MQ=91.03;MQ0=0;MQRankSum=-16.748;QD=84.25;ReadPosRankSum=3.743;VQSLOD=4.7780;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:64,0:64:99:0,193,11112	0/0:6,0:6:18.06:0,18,1077	0/0:27,0:27:81.20:0,81,3940	0/0:31,0:31:90.31:0,90,4674	0/0:25,0:25:75.26:0,75,4214	0/0:22,0:21:66.21:0,66,3895	0/0:24,0:24:72.22:0,72,3749	0/0:29,0:29:87.29:0,87,4923	0/0:24,0:24:72.22:0,72,4055	1/1:0,21:21:50.84:1880,51,0	1/1:0,17:17:41.04:1347,41,0	1/1:0,22:22:48.16:1877,48,0	1/1:0,15:15:36.12:1341,36,0	1/1:1,28:29:81.28:3137,81,0	0/0:27,0:27:78.27:0,78,4703	0/0:25,0:25:75.26:0,75,4332	0/0:20,0:20:60.21:0,60,3609	1/1:0,9:9:18.06:712,18,0	0/0:26,0:26:78.25:0,78,4418	0/0:22,0:22:66.21:0,66,3713	0/0:35,0:35:99:0,102,6143	1/1:0,21:21:57.02:1812,57,0	1/1:0,20:20:41.94:1193,42,0	1/1:0,12:12:17.73:686,18,0	0/0:24,0:24:69.24:0,69,3896	0/0:23,0:23:69.23:0,69,3911	0/0:41,0:41:99:0,123,6828	0/0:3,0:3:9.03:0,9,559
chr10	7912418	.	A	AATGATG	5979.50	PASS	AC=24;AF=0.462;AN=52;BaseQRankSum=-7.932;DP=768;FS=1.084;HRun=0;HaplotypeScore=218.3059;InbreedingCoeff=0.9099;MQ=62.77;MQ0=8;MQRankSum=-9.580;QD=17.90;ReadPosRankSum=-3.981;VQSLOD=3.9416;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:31:9.03:0,9,126	1/1:12,4:16:12.04:353,12,0	./.	./.	1/1:26,1:32:3.01:72,3,0	1/1:22,10:37:37.30:999,37,0	1/1:20,1:28:17.93:372,18,0	1/1:40,0:40:8.97:87,9,0	1/1:24,8:33:30.10:878,30,0	0/0:30,0:29:33.86:0,34,635	0/0:29,0:29:36.11:0,36,666	0/0:15,0:14:21.07:0,21,419	0/0:30,0:30:60.19:0,60,1149	0/0:34,0:34:63.16:0,63,1181	1/1:16,1:23:18.06:441,18,0	1/1:15,0:22:9.50:224,10,0	1/1:14,6:20:21.07:625,21,0	0/0:22,0:23:31.61:0,32,542	1/1:19,0:19:6.02:192,6,0	1/1:23,5:32:30.10:864,30,0	0/0:19,0:29:11.06:0,11,119	0/0:28,0:28:33.10:0,33,565	0/0:33,0:33:42.13:0,42,764	0/0:34,0:34:50.34:0,50,923	1/1:19,11:32:29.90:873,30,0	0/0:12,0:22:33.10:0,33,445	0/0:14,0:24:21.07:0,21,291	0/0:8,0:11:9.03:0,9,126
chr10	7912599	.	G	GCACA	2745.03	PASS	AB=0.830;AC=34;AF=0.680;AN=50;BaseQRankSum=-3.452;DP=705;FS=6.096;HRun=0;HaplotypeScore=136.4791;InbreedingCoeff=0.1045;MQ=63.76;MQ0=15;MQRankSum=3.468;QD=4.77;ReadPosRankSum=-1.588;VQSLOD=2.0883;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:49:1.83:2,0,49	0/1:12,0:12:0.38:0,0,99	./.	./.	0/0:18,0:20:3:0,3,28	0/1:28,1:30:52.33:101,0,52	0/1:27,0:39:43.89:44,0,81	1/1:27,0:26:2.95:20,3,0	0/1:18,0:25:18.14:18,0,37	1/1:11,8:20:24.91:327,25,0	1/1:7,4:15:5.75:83,6,0	1/1:6,10:19:15.05:352,15,0	1/1:21,11:35:26.56:516,27,0	1/1:16,14:36:17.71:364,18,0	0/0:17,0:31:23.95:0,24,212	0/0:10,0:20:15.49:0,15,140	0/1:17,0:32:26.76:27,0,184	1/1:9,6:15:8.86:155,9,0	1/1:18,2:23:20.60:216,21,0	0/1:14,0:14:10.01:161,0,10	1/1:34,0:47:8.01:36,8,0	0/1:12,8:23:37.31:132,0,37	0/1:8,4:15:37.63:74,0,38	1/1:23,10:39:13.02:169,13,0	0/1:14,0:20:3.53:4,0,84	1/1:12,0:18:8.74:79,9,0	1/1:10,0:17:5.49:24,5,0	./.
chr10	7914266	.	CCTCTCTCTCTCTCTCTCTCT	C	670.63	PASS	AB=0.833;AC=8;AF=0.167;AN=48;BaseQRankSum=4.265;DP=362;FS=0.000;HRun=0;HaplotypeScore=134.6928;InbreedingCoeff=0.3327;MQ=40.03;MQ0=58;MQRankSum=-3.666;QD=10.82;ReadPosRankSum=-1.088;VQSLOD=2.4282;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:17:15.05:0,15,910	1/1:4,1:5:3.01:145,3,0	./.	./.	0/0:16,0:15:21.05:0,21,524	0/1:11,1:12:50.29:151,0,50	./.	./.	1/1:9,0:11:2.90:139,3,0	0/0:17,0:16:15.05:0,15,810	0/0:12,0:12:15.94:0,16,742	0/0:13,0:12:18.06:0,18,912	0/0:10,0:10:18.53:0,19,807	0/0:12,0:14:24.08:0,24,1098	0/0:5,0:5:12.04:0,12,326	0/1:9,0:12:99:178,0,306	1/1:20,1:15:3.17:177,3,0	0/0:8,0:8:10.28:0,10,213	0/0:6,0:4:3:0,3,27	0/0:9,0:9:2.68:0,3,11	0/0:16,0:14:18.06:0,18,717	0/0:10,0:10:9.50:0,10,329	0/0:13,0:12:9.97:0,10,408	0/0:23,0:21:18.06:0,18,749	0/0:11,3:12:2.98:0,3,21	0/0:22,0:21:45.15:0,45,1570	0/0:8,0:8:12.04:0,12,453	0/0:4,0:3:3.01:0,3,42
chr10	7914587	.	G	GAGAC	2037.71	PASS	AB=0.736;AC=14;AF=0.250;AN=56;BaseQRankSum=-2.119;DP=767;FS=7.795;HRun=0;HaplotypeScore=174.2787;InbreedingCoeff=-0.3312;MQ=59.94;MQ0=13;MQRankSum=-5.328;QD=5.19;ReadPosRankSum=-0.617;VQSLOD=1.9996;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:58.62:0,59,1483	0/0:18,0:18:33.90:0,34,474	0/0:27,0:14:18.74:0,19,186	0/0:30,0:17:35.22:0,35,373	0/0:36,0:36:56.17:0,56,830	0/0:22,0:21:49.56:0,50,686	0/1:20,0:20:26.79:27,0,453	0/1:33,0:29:99:159,0,458	0/1:31,0:30:9.21:9,0,916	0/1:13,1:35:99:297,0,416	0/1:16,10:27:55.24:55,0,215	0/1:7,2:25:99:305,0,132	0/1:13,1:37:99:300,0,377	0/1:9,3:26:99:350,0,301	0/0:30,0:30:78.84:0,79,1159	0/0:22,0:22:50.97:0,51,870	0/0:32,0:32:84.15:0,84,1257	0/1:2,1:17:83.97:89,0,84	0/0:28,0:26:31.22:0,31,543	0/0:26,0:25:53.11:0,53,602	0/0:21,0:20:20.09:0,20,113	0/1:8,1:33:99:160,0,143	0/1:9,0:23:79.29:79,0,183	0/1:5,1:20:99:116,0,126	0/0:19,0:19:28.24:0,28,351	0/1:29,2:30:99:192,0,183	0/1:31,1:32:55.54:56,0,251	0/0:15,0:15:17.98:0,18,96
chr10	7914605	.	CAG	C	8720.94	PASS	AB=0.984;AC=32;AF=0.571;AN=56;BaseQRankSum=-2.479;DP=719;FS=0.377;HRun=0;HaplotypeScore=122.1329;InbreedingCoeff=0.4512;MQ=56.74;MQ0=15;MQRankSum=0.401;QD=16.80;ReadPosRankSum=1.009;VQSLOD=4.6250;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:90.79:0,91,1497	1/1:1,11:12:23.43:328,23,0	0/0:11,0:4:6.02:0,6,83	0/0:27,0:13:17.75:0,18,252	1/1:1,34:35:47.99:659,48,0	1/1:0,21:20:42.14:571,42,0	1/1:7,14:21:25.14:333,25,0	1/1:11,26:31:62.47:890,62,0	1/1:5,23:27:54.18:734,54,0	0/1:32,0:31:99:479,0,527	0/1:22,1:23:99:108,0,290	0/0:24,0:24:36.04:0,36,454	0/1:32,0:32:4.84:5,0,408	0/1:22,0:22:99:103,0,300	1/1:1,29:30:69.23:948,69,0	1/1:2,18:20:35.91:494,36,0	1/1:4,28:32:56.84:831,57,0	0/0:19,0:19:11.98:0,12,124	1/1:10,18:27:32.67:662,33,0	1/1:2,21:22:41.66:571,42,0	0/1:25,0:24:11.06:11,0,54	0/0:31,0:31:35.02:0,35,388	0/0:20,0:19:14.49:0,14,127	0/0:24,0:24:24.05:0,24,367	1/1:1,17:18:24.08:324,24,0	0/1:28,2:29:99:576,0,116	0/1:35,1:36:91.42:91,0,118	0/1:14,0:13:0.92:1,0,68
chr10	7914607	.	G	GAGAC	6542.13	PASS	AB=0.998;AC=29;AF=0.518;AN=56;BaseQRankSum=-6.050;DP=724;FS=2.171;HRun=0;HaplotypeScore=151.7756;InbreedingCoeff=-0.3970;MQ=55.83;MQ0=15;MQRankSum=-3.732;QD=10.37;ReadPosRankSum=-1.726;VQSLOD=4.4227;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:92.75:0,93,1610	0/0:11,0:11:21.49:0,21,142	0/0:12,0:4:6.02:0,6,82	0/0:27,0:14:18.01:0,18,249	0/1:34,0:34:99:105,0,124	0/1:21,0:19:99:111,0,124	0/1:22,0:22:65.09:76,0,65	1/1:36,0:30:2.29:531,2,0	0/1:29,0:28:65.54:66,0,180	0/1:31,0:30:99:150,0,392	0/1:24,0:24:69.69:70,0,263	0/1:25,0:25:99:236,0,283	0/1:31,0:31:99:167,0,216	0/1:24,0:24:99:118,0,213	0/1:30,0:30:97.84:98,0,227	0/1:19,0:19:22.43:22,0,162	0/1:29,0:30:78.46:78,0,286	0/1:19,0:19:57.42:123,0,57	0/1:29,0:28:99:169,0,125	0/1:22,0:21:63.82:161,0,64	1/1:0,25:25:17.65:485,18,0	0/1:30,0:30:99:113,0,234	0/1:22,0:21:42.65:83,0,43	0/1:26,0:26:22.12:22,0,267	0/1:18,0:18:10.09:126,0,10	1/1:6,25:30:18.84:1586,19,0	1/1:3,31:38:51.17:1361,51,0	1/1:2,12:13:18.06:485,18,0
chr10	7914826	.	TC	T	15810.04	PASS	AB=0.550;AC=31;AF=0.554;AN=56;BaseQRankSum=11.434;DP=927;FS=4.177;HRun=1;HaplotypeScore=170.4278;InbreedingCoeff=0.9281;MQ=63.12;MQ0=4;MQRankSum=-5.986;QD=31.37;ReadPosRankSum=-1.012;VQSLOD=4.1972;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:70,0:70:99:0,199,3122	1/1:0,17:17:36.12:503,36,0	0/0:36,0:21:56.95:0,57,894	0/0:40,0:26:76.07:0,76,1116	1/1:9,19:28:53.90:733,54,0	1/1:2,17:17:42.02:587,42,0	1/1:3,38:41:86.59:1215,87,0	1/1:0,41:41:99:1639,120,0	1/1:2,40:42:99:1380,99,0	0/0:31,0:30:87.30:0,87,1380	0/0:15,0:15:42.14:0,42,669	0/0:29,0:29:84.29:0,84,1341	0/0:36,0:36:96.33:0,96,1531	0/0:42,0:42:99:0,117,1846	1/1:7,35:42:95.97:1340,96,0	1/1:5,30:35:65.85:921,66,0	1/1:5,29:34:77.93:1047,78,0	0/0:29,0:29:81.26:0,81,1271	1/1:1,20:21:60.12:825,60,0	1/1:1,24:25:61.61:841,62,0	1/1:2,51:52:99:1469,105,0	0/0:16,0:16:45.15:0,45,720	0/0:17,0:17:45.14:0,45,696	0/0:62,0:62:99:0,175,2729	1/1:3,18:21:42.01:587,42,0	0/1:6,27:33:22.61:1061,0,23	1/1:4,36:40:91.73:1238,92,0	1/1:3,9:12:33.09:423,33,0
chr10	7914852	.	G	GTCA	13371.59	PASS	AB=0.849;AC=30;AF=0.536;AN=56;BaseQRankSum=3.324;DP=992;FS=0.298;HRun=0;HaplotypeScore=217.9652;InbreedingCoeff=0.8643;MQ=55.02;MQ0=8;MQRankSum=-6.188;QD=24.49;ReadPosRankSum=-3.496;VQSLOD=4.1183;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:74,0:74:99:0,159,2046	1/1:11,10:21:42.09:682,42,0	0/0:29,0:12:23.96:0,24,226	0/0:34,0:19:34.94:0,35,388	1/1:31,4:35:57.09:872,57,0	1/1:15,9:22:39.10:692,39,0	1/1:35,7:42:62.52:899,63,0	1/1:37,0:37:19.14:503,19,0	1/1:25,21:46:81.19:1391,81,0	0/0:36,0:35:78.06:0,78,951	0/0:24,0:24:50.99:0,51,574	0/0:34,0:33:77.38:0,77,1023	0/0:29,0:29:60.11:0,60,777	0/0:40,0:40:93.17:0,93,1210	1/1:29,15:44:78.16:1281,78,0	1/1:25,16:41:36.28:1207,36,0	1/1:24,12:36:60.18:1100,60,0	0/0:27,0:27:63.13:0,63,815	1/1:18,4:20:16.10:403,16,0	1/1:26,8:34:53.94:780,54,0	0/1:38,6:42:9.38:395,0,9	0/0:26,0:26:57.07:0,57,698	0/0:23,0:23:44.97:0,45,508	0/0:69,0:69:99:0,150,1977	1/1:23,8:31:45.10:719,45,0	0/1:28,8:36:11.70:942,0,12	1/1:20,17:37:43:1147,43,0	1/1:3,13:16:18.06:359,18,0
chr10	7915508	.	CA	C	4389.84	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=9.158;DP=661;FS=3.053;HRun=7;HaplotypeScore=78.9207;InbreedingCoeff=0.9939;MQ=76.07;MQ0=0;MQRankSum=-1.446;QD=26.61;ReadPosRankSum=3.203;VQSLOD=5.6757;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:66.20:0,66,818	1/1:1,11:12:33.08:337,33,0	0/0:22,0:21:51.14:0,51,597	0/0:18,0:17:13.29:0,13,326	0/0:27,0:27:75.23:0,75,926	1/1:0,22:22:57.12:580,57,0	1/1:0,12:12:30.07:306,30,0	0/0:35,0:35:84.20:0,84,986	1/1:2,18:20:51.11:520,51,0	0/0:32,0:32:84.27:0,84,1057	0/0:23,0:23:57.18:0,57,703	0/0:31,0:31:78.20:0,78,929	0/0:25,0:25:51.16:0,51,641	0/0:25,0:25:69.19:0,69,851	0/0:32,0:32:66.20:0,66,817	0/0:18,0:18:51.16:0,51,642	1/1:3,21:24:57.13:581,57,0	0/0:19,0:19:51.10:0,51,621	1/1:4,15:19:45.08:452,45,0	1/1:2,22:24:66.13:665,66,0	0/0:8,0:8:18.01:0,18,204	0/0:22,0:22:57.16:0,57,682	0/0:28,0:28:58.06:0,58,719	0/0:24,0:24:54.17:0,54,677	1/1:1,31:32:93.21:948,93,0	0/0:38,1:39:68.64:0,69,1145	0/0:28,0:28:78.22:0,78,953	0/0:9,0:9:21.07:0,21,264
chr10	7915562	.	AAAGG	A	7168.96	PASS	AB=0.740;AC=41;AF=0.759;AN=54;BaseQRankSum=-0.497;DP=567;FS=4.958;HRun=0;HaplotypeScore=155.6389;InbreedingCoeff=0.3619;MQ=69.54;MQ0=8;MQRankSum=-2.805;QD=14.37;ReadPosRankSum=-2.218;VQSLOD=3.9609;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,13:26:18.53:286,19,0	0/1:5,0:9:4.95:97,0,5	./.	0/0:8,0:5:3.01:0,3,45	0/1:4,0:23:8.42:160,0,8	0/1:12,0:16:63.44:63,0,72	0/0:8,0:8:8.10:0,8,35	0/0:15,0:21:11.90:0,12,91	1/1:7,0:15:24.03:223,24,0	1/1:12,14:26:45.09:617,45,0	1/1:9,14:23:35.97:463,36,0	1/1:8,19:26:30.10:475,30,0	1/1:10,26:36:57.19:902,57,0	1/1:11,11:22:21.07:333,21,0	1/1:6,0:25:33.04:307,33,0	1/1:4,0:13:17.99:167,18,0	0/1:12,0:13:18.94:19,0,36	1/1:11,7:18:15.05:238,15,0	1/1:11,0:12:6.01:56,6,0	1/1:9,0:18:5.13:219,5,0	0/0:4,0:9:2.94:0,3,18	1/1:6,21:28:51:727,51,0	1/1:8,17:25:23.22:370,23,0	1/1:11,13:24:18.06:285,18,0	1/1:16,0:24:13.58:242,14,0	1/1:13,1:44:25.90:615,26,0	0/1:12,0:19:29.67:166,0,30	1/1:4,0:9:15.02:140,15,0
chr10	7915630	.	TGAGGGAGGGAAG	T	2142.83	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=4.837;DP=567;FS=6.875;HRun=0;HaplotypeScore=249.5228;InbreedingCoeff=0.8600;MQ=58.44;MQ0=1;MQRankSum=-8.479;QD=28.57;ReadPosRankSum=0.469;VQSLOD=2.0249;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:75.24:0,75,4068	0/0:8,0:8:15:0,15,688	0/0:21,0:18:20.69:0,21,385	0/1:11,0:7:0.03:0,0,152	0/0:28,0:28:59.86:0,60,2970	0/0:17,0:17:48.16:0,48,2520	0/0:26,0:26:54.09:0,54,2026	0/0:22,0:22:17.53:0,18,485	0/0:25,0:25:60.15:0,60,3051	0/0:29,0:29:57.15:0,57,2399	0/0:22,0:22:42.13:0,42,1744	0/0:30,0:30:54.19:0,54,2227	0/0:28,0:28:51.18:0,51,2185	0/0:16,0:16:36.12:0,36,1610	0/0:18,0:18:27.03:0,27,1056	0/0:15,0:15:30.05:0,30,1353	0/0:17,0:17:39.13:0,39,2140	0/0:11,0:10:27.09:0,27,1069	0/0:12,0:12:21.03:0,21,665	0/0:24,0:23:45.11:0,45,2447	1/1:5,0:5:5.97:124,6,0	0/0:24,0:24:45.15:0,45,2108	0/0:18,0:18:33.11:0,33,1576	0/0:27,0:27:72.23:0,72,3249	0/0:22,0:22:45.15:0,45,2180	1/1:25,8:33:47.88:1035,48,0	1/1:8,14:22:35.81:1007,36,0	1/1:3,1:4:5.95:123,6,0
chr10	7917410	.	TGG	T	6297.38	PASS	AB=0.917;AC=46;AF=0.821;AN=56;BaseQRankSum=-2.223;DP=518;FS=1.919;HRun=12;HaplotypeScore=83.3786;InbreedingCoeff=0.6815;MQ=71.85;MQ0=3;MQRankSum=0.346;QD=13.23;ReadPosRankSum=3.310;VQSLOD=3.7524;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:14,21:34:60.09:608,60,0	1/1:0,0:10:21.96:95,22,0	0/0:14,0:9:8.99:0,9,107	0/1:13,0:10:6.23:6,0,28	1/1:7,11:20:35.53:328,36,0	1/1:3,0:22:52.07:224,52,0	1/1:8,0:22:35.63:154,36,0	1/1:17,10:27:22.13:241,22,0	1/1:5,0:16:27.34:118,27,0	1/1:15,14:30:44.77:430,45,0	1/1:10,7:17:27.02:271,27,0	1/1:4,6:11:23.77:225,24,0	1/1:4,9:13:22.76:242,23,0	1/1:3,7:10:21.04:213,21,0	1/1:9,27:36:77.91:793,78,0	1/1:4,12:16:36.07:366,36,0	1/1:6,1:25:44.15:208,44,0	1/1:5,17:22:48.07:488,48,0	1/1:5,0:19:39.30:168,39,0	1/1:13,0:25:26.51:109,27,0	0/1:12,1:15:11.54:12,0,61	1/1:5,11:15:27.05:274,27,0	1/1:11,10:21:30.03:305,30,0	1/1:5,8:14:26.78:256,27,0	1/1:5,0:21:38.14:163,38,0	0/0:6,0:9:4.72:0,5,16	0/0:11,0:16:17.97:0,18,77	0/0:1,0:3:2.50:0,2,9
chr10	7917421	.	GGA	G	1071.13	PASS	AB=0.948;AC=18;AF=0.321;AN=56;BaseQRankSum=2.209;DP=471;FS=47.704;HRun=0;HaplotypeScore=92.0685;InbreedingCoeff=-0.1245;MQ=68.31;MQ0=3;MQRankSum=0.565;QD=3.72;ReadPosRankSum=8.669;VQSLOD=-0.3141;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:22,3:24:9.89:217,10,0	0/0:13,0:13:8.61:0,9,95	0/0:16,0:9:18.40:0,18,194	0/1:8,0:5:7.97:8,0,71	0/1:21,1:22:33.30:33,0,183	0/0:23,0:23:10.28:0,10,123	0/0:18,0:18:34.59:0,35,180	0/1:21,2:23:42.78:43,0,268	0/1:12,0:12:0.36:0,0,27	0/1:27,1:28:99:126,0,257	0/1:13,4:17:78.21:130,0,78	0/1:11,1:12:27.33:27,0,78	0/1:13,0:13:45.41:45,0,48	0/1:10,1:11:43.71:44,0,51	0/1:35,1:36:99:134,0,120	0/1:17,0:17:62.30:110,0,62	0/0:21,0:21:14.11:0,14,67	1/1:18,1:19:15.06:129,15,0	0/0:20,0:20:39.83:0,40,222	0/0:14,0:14:3.68:0,4,106	0/0:15,0:15:20.01:0,20,241	0/1:12,1:12:3.31:51,0,3	0/1:19,1:20:44.77:45,0,133	0/1:11,1:12:28.06:92,0,28	0/0:16,0:16:27.90:0,28,121	0/0:10,0:10:26.85:0,27,223	0/0:12,0:12:28.73:0,29,213	0/0:5,0:5:11.64:0,12,78
chr10	7918947	.	TACAC	T	1762.96	PASS	AB=0.783;AC=33;AF=0.660;AN=50;BaseQRankSum=-2.050;DP=520;FS=6.872;HRun=0;HaplotypeScore=98.9450;InbreedingCoeff=0.1350;MQ=62.50;MQ0=22;MQRankSum=-1.892;QD=4.99;ReadPosRankSum=0.090;VQSLOD=1.5575;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:29,1:30:1.42:109,1,0	0/1:7,0:7:6.99:16,0,7	./.	./.	1/1:14,0:22:9.01:84,9,0	0/1:11,8:18:20.85:156,0,21	1/1:14,6:19:3.01:46,3,0	./.	0/1:8,1:18:22.38:57,0,22	0/1:17,4:21:1.06:110,0,1	1/1:10,0:10:6:64,6,0	1/1:3,5:8:3.01:46,3,0	1/1:9,7:16:5.99:92,6,0	0/1:16,3:19:45.52:165,0,46	1/1:8,0:23:2.40:199,2,0	1/1:8,0:21:15.02:139,15,0	1/1:15,0:13:0.72:96,1,0	1/1:8,3:10:2:44,2,0	0/0:12,0:12:5.49:0,5,24	1/1:12,4:15:3.95:47,4,0	0/0:26,0:24:6.01:0,6,74	0/1:22,6:25:14.72:83,0,15	0/1:3,1:7:3.41:61,0,3	1/1:12,1:16:11.99:122,12,0	1/1:11,11:22:12.04:173,12,0	0/0:21,0:21:27.89:0,28,305	0/0:13,0:12:12.04:0,12,217	0/0:9,0:9:3.01:0,3,49
chr10	7918969	.	C	CACAT	940.83	PASS	AB=0.559;AC=6;AF=0.107;AN=56;BaseQRankSum=1.407;DP=591;FS=20.045;HRun=0;HaplotypeScore=110.3093;InbreedingCoeff=0.5196;MQ=52.38;MQ0=36;MQRankSum=4.227;QD=8.96;ReadPosRankSum=2.392;VQSLOD=1.0839;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:45.19:0,45,474	0/0:8,0:8:19.78:0,20,151	0/0:21,0:4:12.02:0,12,148	0/0:26,0:7:14.95:0,15,124	0/0:20,0:19:26.93:0,27,229	0/0:18,0:17:35.92:0,36,329	0/0:25,0:21:41.74:0,42,345	0/0:26,0:23:65.69:0,66,520	0/0:18,0:17:29.95:0,30,306	0/0:22,0:21:61.87:0,62,526	0/0:12,0:12:26.27:0,26,225	0/0:16,0:15:11.93:0,12,98	0/0:20,0:20:35.22:0,35,277	0/0:20,0:20:16.60:0,17,338	0/0:23,0:23:39:0,39,362	0/0:19,0:19:32.99:0,33,299	0/0:22,0:19:38.48:0,38,329	0/0:15,0:14:25.87:0,26,202	0/0:18,0:17:47.75:0,48,384	0/0:18,0:17:27.30:0,27,227	0/1:9,25:35:17.02:76,0,17	0/0:24,0:21:29.97:0,30,264	0/0:17,0:16:26.97:0,27,262	0/0:19,0:18:27.86:0,28,241	0/0:25,0:25:42:0,42,391	1/1:9,23:34:20.75:667,21,0	0/1:3,12:14:34.33:244,0,34	1/1:3,13:16:2.92:79,3,0
chr10	7919300	.	G	GTA	7326.78	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-5.355;DP=780;FS=0.339;HRun=0;HaplotypeScore=128.2408;InbreedingCoeff=0.9969;MQ=68.58;MQ0=0;MQRankSum=-1.193;QD=36.09;ReadPosRankSum=3.691;VQSLOD=7.0078;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:81.07:0,81,1019	1/1:2,6:8:15.05:257,15,0	0/0:26,0:25:46.69:0,47,518	0/0:20,0:17:25.88:0,26,293	0/0:28,0:28:78.23:0,78,1003	1/1:4,25:29:69.24:1182,69,0	1/1:1,18:19:48.16:822,48,0	0/0:52,0:52:99:0,132,1649	1/1:6,34:40:78.27:1335,78,0	0/0:31,0:30:81.26:0,81,1054	0/0:33,0:33:84.19:0,84,1026	0/0:31,0:31:81.21:0,81,1016	0/0:33,0:33:87.23:0,87,1093	0/0:31,0:31:78.24:0,78,1008	0/0:32,0:32:93.27:0,93,1189	0/0:30,1:31:35.88:0,36,1034	1/1:2,15:17:32.70:524,33,0	0/0:11,0:11:30.10:0,30,393	1/1:6,16:21:48.15:794,48,0	1/1:3,32:35:84.29:1438,84,0	0/0:26,0:26:69.17:0,69,858	0/0:26,0:26:60.13:0,60,724	0/0:40,0:40:99:0,108,1304	0/0:16,0:16:39.07:0,39,478	1/1:5,28:33:57.20:976,57,0	0/0:32,0:32:75.20:0,75,951	0/0:30,0:29:78.23:0,78,994	0/0:18,0:18:45.07:0,45,539
chr10	7919672	.	TG	T	2538.34	PASS	AB=0.893;AC=19;AF=0.339;AN=56;BaseQRankSum=-0.792;DP=582;FS=4.237;HRun=11;HaplotypeScore=102.2352;InbreedingCoeff=0.7251;MQ=79.25;MQ0=0;MQRankSum=-1.379;QD=11.04;ReadPosRankSum=3.711;VQSLOD=3.3538;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:20:8.19:0,8,76	1/1:2,5:7:8.98:74,9,0	0/0:23,1:24:8.76:0,9,236	0/1:25,0:22:2.88:3,0,132	0/0:26,0:26:61.79:0,62,257	1/1:5,17:22:47.87:388,48,0	1/1:3,13:16:24.85:199,25,0	0/0:36,0:36:65.96:0,66,301	1/1:4,23:27:50.93:419,51,0	0/1:16,2:18:24.41:24,0,132	0/1:10,4:14:47.63:48,0,104	0/0:16,0:16:32.97:0,33,300	0/0:27,0:27:41.93:0,42,383	0/0:16,0:16:35.99:0,36,329	0/0:30,0:30:69.64:0,70,287	0/0:20,0:20:45.14:0,45,187	1/1:2,19:22:55.91:442,56,0	0/0:15,0:15:21.05:0,21,224	1/1:6,11:18:37.69:281,38,0	1/1:12,23:36:61.81:488,62,0	0/0:23,4:28:11.62:0,12,278	0/0:12,2:14:8.08:0,8,114	0/0:17,0:17:20.98:0,21,192	0/0:13,0:13:27.06:0,27,281	1/1:6,18:25:46.94:375,47,0	0/0:13,0:13:9.02:0,9,96	0/0:31,1:32:19.82:0,20,555	0/0:4,0:4:9.01:0,9,88
chr10	7919675	.	G	GA	3709.42	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-7.407;DP=559;FS=1.868;HRun=0;HaplotypeScore=93.2544;InbreedingCoeff=0.9773;MQ=79.87;MQ0=0;MQRankSum=-1.499;QD=34.35;ReadPosRankSum=5.553;VQSLOD=3.1247;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:14.56:0,15,96	0/0:7,0:7:11.89:0,12,84	0/0:24,0:23:55.42:0,55,539	0/0:25,0:22:46.08:0,46,398	1/1:0,26:27:75.06:944,75,0	0/0:23,0:23:65.28:0,65,480	0/0:18,0:18:32.80:0,33,248	1/1:0,29:31:87.03:1007,87,0	0/0:28,0:28:62.58:0,63,462	0/0:16,0:16:39.03:0,39,406	0/0:15,0:15:39:0,39,404	0/0:17,0:17:48.04:0,48,548	0/0:24,0:24:66.03:0,66,712	0/0:17,0:17:48.08:0,48,552	1/1:0,28:28:78.26:1063,78,0	1/1:0,22:22:51.17:695,51,0	0/0:22,0:22:59.55:0,60,434	0/0:11,0:11:33.04:0,33,387	0/0:18,0:18:50.30:0,50,373	0/0:35,0:35:92.39:0,92,693	0/0:24,0:24:43.49:0,43,506	0/0:15,0:15:32.83:0,33,331	0/0:19,0:19:41.97:0,42,420	0/0:13,0:13:36.08:0,36,451	0/0:25,0:25:64.94:0,65,476	0/0:10,0:10:27.01:0,27,282	0/0:29,0:29:85.36:0,85,1007	0/0:4,0:4:12.02:0,12,135
chr10	7922334	.	T	TGGA	13393.76	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=4.373;DP=555;FS=12.285;HRun=0;HaplotypeScore=69.7290;InbreedingCoeff=0.8174;MQ=50.34;MQ0=18;MQRankSum=3.870;QD=26.79;ReadPosRankSum=7.455;VQSLOD=3.4080;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,33:25:51.18:1139,51,0	1/1:1,9:8:18.06:402,18,0	0/0:27,0:25:59.99:0,60,860	0/0:28,0:28:69.19:0,69,1057	1/1:4,19:20:21.07:469,21,0	1/1:2,15:10:12.04:268,12,0	1/1:2,15:14:33.11:736,33,0	1/1:6,5:5:6:75,6,0	1/1:7,18:17:18.06:401,18,0	1/1:2,24:19:48.16:1045,48,0	1/1:6,13:17:24.08:536,24,0	1/1:2,18:12:27.09:600,27,0	1/1:4,17:12:24.08:533,24,0	1/1:5,18:19:36.12:780,36,0	1/1:8,17:18:27.09:603,27,0	1/1:4,20:13:24.08:536,24,0	1/1:6,14:14:21.07:469,21,0	1/1:3,9:11:16.30:338,16,0	1/1:2,12:9:24.04:460,24,0	1/1:2,16:10:18.06:402,18,0	1/1:0,2:2:3.01:67,3,0	1/1:8,23:22:27.09:602,27,0	1/1:3,14:11:24.08:535,24,0	1/1:2,7:8:12.04:268,12,0	1/1:2,11:8:21.07:469,21,0	1/1:2,17:15:36.07:692,36,0	1/1:0,18:13:30.10:634,30,0	1/1:0,7:6:15.05:335,15,0
chr10	7923374	.	T	TCCCC	3228.29	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-5.994;DP=486;FS=4.518;HRun=6;HaplotypeScore=80.0705;InbreedingCoeff=0.9796;MQ=84.08;MQ0=0;MQRankSum=-5.224;QD=39.37;ReadPosRankSum=0.036;VQSLOD=1.1297;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:16:12.03:194,12,0	0/0:6,0:6:15.04:0,15,243	0/0:21,0:21:38.63:0,39,669	0/0:11,0:11:21.04:0,21,305	0/0:23,0:23:60.19:0,60,970	0/0:23,0:23:63.20:0,63,1019	0/0:8,0:8:21.07:0,21,340	0/0:38,0:38:99:0,99,1500	0/0:16,0:16:45.15:0,45,729	0/0:30,0:30:84.28:0,84,1359	0/0:20,0:20:54.17:0,54,874	0/0:12,0:12:36.12:0,36,583	0/0:14,0:14:42.14:0,42,680	0/0:19,0:19:57.19:0,57,921	0/0:16,0:16:45.12:0,45,703	0/0:14,0:14:39.11:0,39,585	0/0:17,0:17:51.15:0,51,795	0/0:14,0:14:39.13:0,39,632	0/0:17,0:17:45.15:0,45,729	0/0:22,0:22:57.18:0,57,923	1/1:2,13:17:30.10:762,30,0	0/0:13,0:13:33.10:0,33,534	0/0:25,0:25:72.24:0,72,1166	0/0:12,0:12:36.11:0,36,558	0/0:13,0:13:33.10:0,33,534	1/1:5,17:24:48.15:1104,48,0	1/1:6,12:18:42.14:1032,42,0	1/1:1,5:6:12.04:307,12,0
chr10	7923936	.	AT	A	4774.39	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=4.398;DP=462;FS=0.833;HRun=1;HaplotypeScore=95.7921;InbreedingCoeff=0.9915;MQ=72.30;MQ0=0;MQRankSum=-2.555;QD=36.17;ReadPosRankSum=2.127;VQSLOD=5.0537;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:42.14:0,42,625	0/0:4,0:4:12.03:0,12,158	0/0:9,2:8:21.01:0,21,264	0/0:29,0:25:61.74:0,62,723	0/0:24,0:24:65.28:0,65,870	0/0:20,0:20:51.13:0,51,697	0/0:16,0:16:45.15:0,45,660	0/0:31,0:31:93.29:0,93,1338	0/0:10,0:10:26.28:0,26,345	1/1:0,13:13:39.10:523,39,0	1/1:0,16:16:48.12:648,48,0	1/1:3,17:20:51.06:646,51,0	1/1:1,9:10:29.97:391,30,0	1/1:0,16:16:42.14:586,42,0	0/0:22,0:22:66.21:0,66,952	0/0:12,0:12:26.94:0,27,401	0/0:14,0:14:39.09:0,39,536	1/1:0,12:12:36.12:502,36,0	0/0:17,0:17:51.13:0,51,705	0/0:21,0:21:63.21:0,63,942	0/0:5,0:5:15.05:0,15,223	1/1:1,11:12:36.03:458,36,0	1/1:0,15:15:33.09:460,33,0	1/1:2,16:18:45.01:561,45,0	0/0:16,0:16:48.09:0,48,690	0/0:18,0:18:54.18:0,54,782	0/0:28,0:28:78.09:0,78,1094	0/0:17,0:17:48.09:0,48,688
chr10	7923952	.	TACAC	T	1992.10	PASS	AC=14;AF=0.269;AN=52;BaseQRankSum=3.865;DP=534;FS=0.605;HRun=0;HaplotypeScore=151.4429;InbreedingCoeff=0.7886;MQ=58.52;MQ0=5;MQRankSum=-0.023;QD=15.44;ReadPosRankSum=3.851;VQSLOD=3.2496;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:16:3:28,3,0	0/0:2,0:5:9.02:0,9,132	0/0:17,0:10:3.01:0,3,45	0/0:29,0:21:9.03:0,9,190	1/1:5,15:24:33.11:500,33,0	0/0:17,0:23:27.09:0,27,552	0/0:9,0:14:17.91:0,18,371	./.	0/0:8,0:13:15.05:0,15,279	0/0:23,0:23:49.94:0,50,898	0/0:26,0:25:3.01:0,3,69	0/0:23,0:26:30.09:0,30,534	0/0:12,0:13:12.02:0,12,184	0/0:18,0:18:3.01:0,3,53	1/1:10,12:24:39.12:575,39,0	1/1:2,12:15:30.06:453,30,0	0/0:9,0:18:27.09:0,27,525	0/0:14,0:15:18.53:0,19,341	0/0:19,0:19:27.08:0,27,544	0/0:18,0:27:26.83:0,27,437	./.	0/0:18,0:17:9.03:0,9,174	0/0:24,0:24:6.02:0,6,106	0/0:24,0:25:6.23:0,6,76	0/0:17,0:24:17.87:0,18,347	1/1:6,0:15:15.02:140,15,0	1/1:8,0:24:39.04:363,39,0	1/1:6,0:11:12.01:112,12,0
chr10	7924082	.	GA	G	2251.22	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=13.276;DP=517;FS=4.757;HRun=8;HaplotypeScore=60.5885;InbreedingCoeff=0.9876;MQ=68.14;MQ0=0;MQRankSum=-0.903;QD=23.70;ReadPosRankSum=1.947;VQSLOD=4.4611;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,16:16:42.07:405,42,0	0/0:10,0:10:30.09:0,30,361	0/0:5,0:5:10.58:0,11,113	0/0:13,0:12:21.06:0,21,245	0/0:35,0:35:99:0,99,1185	0/0:26,0:26:72.19:0,72,854	0/0:14,0:14:39.12:0,39,471	0/0:21,0:20:54.17:0,54,652	0/0:10,0:10:27.08:0,27,326	0/0:16,0:16:42.11:0,42,483	0/0:25,0:25:69.20:0,69,824	0/0:19,0:19:57.17:0,57,678	0/0:30,0:30:75.21:0,75,886	0/0:20,0:20:54.16:0,54,646	0/0:23,0:23:60.17:0,60,715	0/0:18,0:18:54.16:0,54,642	0/0:14,0:14:36.11:0,36,435	0/0:16,0:16:48.15:0,48,580	0/0:25,0:25:72.21:0,72,857	0/0:21,0:21:57.16:0,57,674	1/1:2,9:11:27.04:261,27,0	0/0:10,0:10:21.06:0,21,254	0/0:20,0:20:60.18:0,60,725	0/0:17,0:17:45.07:0,45,525	0/0:14,0:14:33.10:0,33,399	1/1:1,25:26:75.10:717,75,0	1/1:3,27:30:75.11:724,75,0	1/1:1,11:12:33.05:319,33,0
chr10	7924672	.	T	TACAC	1543.53	PASS	AB=0.886;AC=19;AF=0.679;AN=28;BaseQRankSum=2.680;DP=124;FS=0.000;HRun=0;HaplotypeScore=70.2266;InbreedingCoeff=0.2573;MQ=41.93;MQ0=7;MQRankSum=-0.230;QD=19.06;ReadPosRankSum=3.577;VQSLOD=2.6999;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	1/1:6,0:6:8.94:80,9,0	0/0:6,0:2:2.98:0,3,22	0/0:13,0:4:11.23:0,11,96	./.	1/1:5,1:6:6:92,6,0	./.	0/1:11,0:9:18.79:204,0,19	1/1:5,0:5:3.01:42,3,0	./.	./.	./.	./.	./.	./.	1/1:2,0:2:2.99:24,3,0	1/1:7,5:11:15.80:353,16,0	0/0:2,0:1:2.90:0,3,16	1/1:6,4:8:21.91:354,22,0	1/1:4,5:9:14.83:212,15,0	./.	./.	./.	./.	1/1:9,1:10:13.49:172,13,0	0/1:3,0:4:9.24:77,0,9	0/1:5,0:5:7.23:47,0,7	./.
chr10	7924736	.	AT	A	1287.69	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-0.944;DP=273;FS=14.223;HRun=5;HaplotypeScore=44.2464;InbreedingCoeff=0.9313;MQ=71.47;MQ0=0;MQRankSum=2.295;QD=26.28;ReadPosRankSum=2.040;VQSLOD=2.0256;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:23.99:0,24,286	0/0:8,0:8:24.08:0,24,328	0/0:4,0:4:12.04:0,12,156	0/0:8,0:8:21.07:0,21,272	0/0:14,0:14:42.10:0,42,551	0/0:12,0:12:33.07:0,33,429	0/0:12,0:12:33.08:0,33,417	0/0:22,0:22:60.16:0,60,795	0/0:6,0:6:18.05:0,18,230	1/1:0,9:9:27.08:306,27,0	1/1:0,3:3:9.03:102,9,0	1/1:0,6:6:18.05:198,18,0	1/1:0,4:4:12.03:136,12,0	1/1:0,3:3:3.01:34,3,0	0/0:7,0:7:21.07:0,21,287	0/0:10,0:10:27.09:0,27,369	0/0:16,0:16:45.15:0,45,610	1/1:1,7:8:21.06:238,21,0	0/0:12,0:12:30.06:0,30,389	0/0:24,0:24:66.21:0,66,886	0/0:4,0:4:12.04:0,12,164	1/1:0,4:4:12.03:136,12,0	1/1:2,4:6:12.03:136,12,0	1/1:0,6:6:18.05:204,18,0	0/0:14,0:14:39.12:0,39,516	0/0:9,0:9:24.08:0,24,323	0/0:16,0:16:48.12:0,48,631	0/0:15,0:15:33.11:0,33,449
chr10	7926389	.	AT	A	5571.45	PASS	AB=0.909;AC=44;AF=0.786;AN=56;BaseQRankSum=-0.866;DP=493;FS=0.959;HRun=10;HaplotypeScore=161.6195;InbreedingCoeff=0.7560;MQ=69.90;MQ0=0;MQRankSum=-1.911;QD=14.29;ReadPosRankSum=-0.861;VQSLOD=3.1794;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:29.27:0,29,263	1/1:4,12:16:38.89:327,39,0	0/0:13,0:13:17.78:0,18,170	0/1:7,2:6:20.04:39,0,20	1/1:3,18:21:44.83:380,45,0	1/1:5,14:19:38.99:337,39,0	1/1:2,7:9:20.99:181,21,0	1/1:11,20:31:59.97:520,60,0	1/1:3,15:18:44.29:387,44,0	1/1:24,0:24:48.95:226,49,0	1/1:23,0:23:52.64:245,53,0	1/1:14,0:14:23.70:91,24,0	1/1:22,0:22:41.92:183,42,0	1/1:18,0:18:29.70:131,30,0	1/1:6,16:22:41.95:361,42,0	1/1:4,12:16:29.99:258,30,0	1/1:2,17:19:47.99:414,48,0	1/1:10,0:10:8.20:57,8,0	1/1:6,4:10:11.99:103,12,0	1/1:2,18:20:50.92:440,51,0	0/0:12,0:12:20.22:0,20,85	1/1:10,0:10:8.50:90,9,0	1/1:18,0:18:32.20:136,32,0	1/1:14,0:14:27.37:125,27,0	1/1:1,21:22:59.96:515,60,0	0/0:27,0:27:46.13:0,46,230	0/0:19,0:19:27.57:0,28,205	0/1:5,0:5:21.97:24,0,22
chr10	7926398	.	T	TA	7571.33	PASS	AB=1.000;AC=45;AF=0.804;AN=56;BaseQRankSum=-0.220;DP=493;FS=3.060;HRun=0;HaplotypeScore=159.1258;InbreedingCoeff=0.5524;MQ=70.33;MQ0=0;MQRankSum=-1.871;QD=16.60;ReadPosRankSum=2.148;VQSLOD=6.6645;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:33:14.96:49,0,15	1/1:14,0:14:37.91:197,38,0	0/0:13,0:13:22.76:0,23,224	0/0:11,0:8:9.07:0,9,84	1/1:24,0:24:64.94:373,65,0	1/1:15,0:15:35.90:171,36,0	1/1:7,0:7:19.92:104,20,0	1/1:26,0:26:65.47:309,65,0	1/1:19,0:19:54.12:307,54,0	1/1:3,21:24:66.17:774,66,0	1/1:4,22:26:60.45:710,60,0	1/1:0,11:11:30.09:358,30,0	1/1:2,16:18:46.19:581,46,0	1/1:1,18:19:29.40:363,29,0	1/1:22,0:22:57.23:337,57,0	1/1:13,0:13:30.24:161,30,0	1/1:20,0:20:53.07:286,53,0	1/1:0,9:9:24.01:276,24,0	1/1:8,0:8:14.69:92,15,0	1/1:18,0:18:51.11:277,51,0	0/0:8,0:8:3.69:0,4,11	1/1:2,11:13:23.83:317,24,0	1/1:4,21:25:47.97:532,48,0	1/1:2,11:13:27.62:366,28,0	1/1:27,0:27:78.21:472,78,0	0/1:27,0:27:9.56:63,0,10	0/1:25,0:25:24.42:96,0,24	0/0:5,0:5:2.49:0,2,7
chr10	7926547	.	AGTGG	A	9032.31	PASS	AB=1.000;AC=45;AF=0.804;AN=56;BaseQRankSum=-1.242;DP=619;FS=9.244;HRun=0;HaplotypeScore=168.8247;InbreedingCoeff=0.2074;MQ=64.66;MQ0=1;MQRankSum=-2.481;QD=16.19;ReadPosRankSum=0.914;VQSLOD=4.1313;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:20,0:20:7.93:134,0,8	1/1:1,11:12:4.26:54,4,0	0/0:36,0:27:78.32:0,78,1438	0/0:25,0:20:59.36:0,59,1096	1/1:0,30:30:20.74:153,21,0	1/1:2,19:21:7.79:107,8,0	1/1:17,0:17:44.43:476,44,0	1/1:0,20:20:54.08:749,54,0	1/1:15,1:16:39.80:530,40,0	0/1:26,0:26:41.27:250,0,41	1/1:25,0:25:21.16:263,21,0	0/1:25,0:25:3.35:150,0,3	1/1:29,0:29:12.12:141,12,0	0/1:24,0:24:47.82:97,0,48	1/1:0,23:23:36.08:632,36,0	1/1:0,28:28:60.20:1114,60,0	1/1:28,1:29:74.75:956,75,0	0/1:19,0:19:8.04:118,0,8	1/1:0,12:12:36.04:475,36,0	1/1:32,0:32:85.72:956,86,0	1/1:10,0:10:12.24:103,12,0	0/1:18,0:18:20.72:89,0,21	0/1:23,0:23:34.71:214,0,35	1/1:10,0:10:14.88:109,15,0	1/1:24,0:24:55:575,55,0	1/1:29,0:29:27.78:238,28,0	1/1:24,0:24:30.69:257,31,0	1/1:12,0:12:14.98:92,15,0
chr10	7926623	.	G	GATAGATAA	4638.40	PASS	AB=1.000;AC=25;AF=0.446;AN=56;BaseQRankSum=2.781;DP=577;FS=7.486;HRun=0;HaplotypeScore=178.0433;InbreedingCoeff=0.7081;MQ=56.82;MQ0=11;MQRankSum=-1.351;QD=15.83;ReadPosRankSum=0.379;VQSLOD=3.4003;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:5,0:27:3.57:124,4,0	0/0:9,0:9:21.02:0,21,313	0/0:23,0:12:34.35:0,34,306	0/0:24,0:9:27.01:0,27,276	0/0:19,0:19:29.56:0,30,265	0/0:17,0:16:33.02:0,33,535	0/0:24,0:24:65.87:0,66,879	0/0:40,0:40:86.42:0,86,725	0/0:18,0:18:50.96:0,51,728	1/1:24,2:25:57.06:883,57,0	1/1:3,13:17:18.23:118,18,0	1/1:2,14:17:6.02:254,6,0	1/1:2,23:31:2.76:92,3,0	1/1:3,19:25:11.30:397,11,0	0/0:20,0:20:24.31:0,24,197	0/0:25,0:24:40.63:0,41,362	0/0:15,0:15:39.04:0,39,630	1/1:16,0:17:45:733,45,0	0/0:17,0:15:36.03:0,36,470	0/0:22,0:22:58.27:0,58,836	0/1:18,0:18:99:225,0,136	1/1:1,14:16:13.23:82,13,0	1/1:16,0:16:36.98:401,37,0	1/1:19,0:19:34.54:410,35,0	0/0:11,0:10:22.57:0,23,296	0/1:23,0:23:99:304,0,168	0/1:28,0:27:99:388,0,172	1/1:13,0:11:26.96:229,27,0
chr10	7926784	.	A	AT	7654.42	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-6.413;DP=594;FS=0.680;HRun=6;HaplotypeScore=119.8451;InbreedingCoeff=0.9933;MQ=68.86;MQ0=0;MQRankSum=-4.870;QD=30.14;ReadPosRankSum=-0.525;VQSLOD=3.3262;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:39.09:0,39,398	1/1:0,10:10:30.09:371,30,0	0/0:25,0:24:51.99:0,52,516	0/0:13,0:12:14.97:0,15,152	1/1:3,27:30:72.17:873,72,0	1/1:4,17:21:54.14:662,54,0	1/1:3,20:23:57.18:716,57,0	1/1:8,33:41:99:1220,102,0	1/1:2,11:13:33.11:414,33,0	0/0:34,0:34:96.22:0,96,977	0/0:20,0:20:45.10:0,45,459	0/0:16,0:16:42.09:0,42,428	0/0:20,0:20:45.10:0,45,459	0/0:20,0:20:51.11:0,51,520	1/1:6,19:25:63.18:762,63,0	1/1:8,16:25:51.05:586,51,0	1/1:3,4:7:12:133,12,0	0/0:16,0:16:48.08:0,48,481	1/1:4,13:17:42.13:520,42,0	1/1:4,20:24:63.20:792,63,0	0/0:16,0:16:45.10:0,45,457	0/0:26,0:26:72.16:0,72,734	0/0:19,0:19:42.09:0,42,428	0/0:14,0:14:39.07:0,39,390	1/1:1,17:18:48.15:604,48,0	0/0:28,0:28:81.18:0,81,826	0/0:27,0:27:66.15:0,66,673	0/0:28,0:27:78.17:0,78,791
chr10	7926794	.	GTGT	G	15250.30	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=1.713;DP=588;FS=12.483;HRun=0;HaplotypeScore=122.7303;InbreedingCoeff=0.9188;MQ=65.24;MQ0=0;MQRankSum=-4.115;QD=27.63;ReadPosRankSum=4.198;VQSLOD=4.7225;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,12:19:30.10:429,30,0	1/1:6,5:11:21.06:283,21,0	0/0:23,0:24:29.74:0,30,616	0/0:11,0:10:14.97:0,15,299	1/1:13,20:33:60.20:841,60,0	1/1:5,16:22:57.16:793,57,0	1/1:11,7:18:24.08:343,24,0	1/1:25,15:40:5.23:821,5,0	1/1:7,6:13:27.07:353,27,0	1/1:13,21:34:54.18:760,54,0	1/1:8,15:23:42.14:600,42,0	1/1:1,15:16:39.13:558,39,0	1/1:4,16:20:39.13:558,39,0	1/1:4,13:17:36.12:515,36,0	1/1:8,14:22:42.14:601,42,0	1/1:2,19:21:51.17:729,51,0	1/1:3,4:7:17.99:233,18,0	1/1:3,11:14:33.11:472,33,0	1/1:8,5:13:18.06:257,18,0	1/1:9,16:25:54.18:763,54,0	1/1:9,8:17:21.07:301,21,0	1/1:4,27:31:69.23:987,69,0	1/1:4,16:20:29.79:429,30,0	1/1:2,13:15:30:429,30,0	1/1:2,14:16:39.13:558,39,0	1/1:8,22:30:66.22:931,66,0	1/1:5,22:27:54.10:773,54,0	1/1:5,23:27:66.22:931,66,0
chr10	7926884	.	AAACT	A	2101.82	PASS	AB=0.773;AC=8;AF=0.143;AN=56;BaseQRankSum=7.929;DP=611;FS=11.192;HRun=0;HaplotypeScore=148.6531;InbreedingCoeff=-0.1667;MQ=87.09;MQ0=0;MQRankSum=-8.256;QD=12.97;ReadPosRankSum=-4.819;VQSLOD=1.1761;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:66.23:0,66,1807	0/1:7,3:10:99:131,0,107	0/0:28,0:28:72.25:0,72,1865	0/0:21,0:21:50.40:0,50,1370	0/0:28,0:28:69.24:0,69,1881	0/1:17,9:26:99:517,0,140	0/1:14,4:18:99:169,0,130	0/0:30,0:30:90.31:0,90,2448	0/1:12,3:15:99:154,0,135	0/0:32,0:32:81.28:0,81,2174	0/0:24,0:24:60.20:0,60,1593	0/0:15,0:15:42.14:0,42,1136	0/0:32,0:32:90.29:0,90,2406	0/0:23,0:23:66.23:0,66,1808	0/0:26,0:26:72.23:0,72,1907	0/0:16,0:16:39.13:0,39,1069	0/1:12,5:17:77.02:174,0,77	0/0:11,0:11:33.11:0,33,860	0/1:12,13:25:99:613,0,135	0/1:28,6:34:99:301,0,362	0/0:19,0:19:54.19:0,54,1465	0/0:25,0:25:63.22:0,63,1675	0/0:19,0:19:51.18:0,51,1381	0/0:17,0:17:42.04:0,42,1140	0/1:11,6:17:99:179,0,178	0/0:23,0:23:63.22:0,63,1704	0/0:25,0:25:69.24:0,69,1879	0/0:11,0:11:33.08:0,33,764
chr10	7926887	.	C	CCACA	3191.11	PASS	AB=0.680;AC=8;AF=0.143;AN=56;BaseQRankSum=12.005;DP=552;FS=1.729;HRun=0;HaplotypeScore=132.4225;InbreedingCoeff=-0.0415;MQ=88.59;MQ0=0;MQRankSum=-9.846;QD=30.10;ReadPosRankSum=4.688;VQSLOD=3.2199;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:66.23:0,66,1383	0/1:3,4:7:39.37:242,0,39	0/0:25,0:25:72.22:0,72,1409	0/0:21,0:21:54.04:0,54,1044	0/0:28,0:28:69.24:0,69,1445	0/1:9,8:17:99:477,0,120	0/1:4,3:7:44.94:179,0,45	0/0:32,0:32:90.31:0,90,1869	0/1:7,6:13:6.19:594,0,6	0/0:34,0:34:87.28:0,87,1737	0/0:23,0:23:60.12:0,60,1211	0/0:15,0:15:41.77:0,42,877	0/0:31,0:31:87.30:0,87,1823	0/0:24,0:24:69.22:0,69,1409	0/0:26,0:26:69.24:0,69,1446	0/0:16,0:16:39.13:0,39,818	0/1:5,5:10:3.66:306,0,4	0/0:11,0:11:33.11:0,33,649	0/1:13,3:16:99:161,0,206	0/1:7,15:22:59.62:942,0,60	0/0:18,0:18:54.19:0,54,1120	0/0:24,0:24:63.22:0,63,1295	0/0:19,0:19:54.17:0,54,1088	0/0:16,0:16:42.14:0,42,879	0/1:6,8:14:48.95:426,0,49	0/0:24,0:24:66.22:0,66,1327	0/0:25,0:25:69.24:0,69,1438	0/0:10,0:10:30.06:0,30,550
chr10	7926888	.	T	TGAAACCAAATGA	12997.11	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=14.209;DP=552;FS=6.564;HRun=0;HaplotypeScore=199.2759;InbreedingCoeff=0.9946;MQ=88.45;MQ0=0;MQRankSum=-13.737;QD=118.16;ReadPosRankSum=0.502;VQSLOD=4.0027;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:69.22:0,69,2563	1/1:3,4:7:21.07:974,21,0	0/0:25,0:25:72.22:0,72,2233	0/0:21,0:21:49.88:0,50,1702	0/0:27,0:27:69.71:0,70,2637	1/1:10,8:18:48.16:2216,48,0	1/1:5,3:8:21.07:870,21,0	0/0:33,0:33:93.30:0,93,3071	1/1:8,6:14:13.97:1303,14,0	0/0:34,0:34:84.29:0,84,3003	0/0:23,0:23:60.16:0,60,2204	0/0:15,0:15:41.93:0,42,1460	0/0:31,0:31:90.29:0,90,3396	0/0:24,0:24:69.24:0,69,2589	0/0:25,0:25:72.23:0,72,2665	0/0:15,0:15:39.13:0,39,1545	1/1:5,5:10:24.08:1109,24,0	0/0:11,0:11:33.05:0,33,1110	1/1:15,3:18:54.10:1715,54,0	1/1:6,14:21:63.22:3212,63,0	0/0:18,0:18:54.19:0,54,1941	0/0:23,0:23:63.15:0,63,2320	0/0:19,0:19:54.19:0,54,1970	0/0:16,0:16:42.14:0,42,1568	1/1:6,8:14:33.11:1598,33,0	0/0:24,0:24:69.18:0,69,2367	0/0:24,0:24:69.71:0,70,2461	0/0:10,0:10:27.07:0,27,937
chr10	7927471	.	A	AGTGT	7426.39	PASS	AB=0.800;AC=50;AF=0.893;AN=56;BaseQRankSum=-3.258;DP=771;FS=9.564;HRun=0;HaplotypeScore=157.9600;InbreedingCoeff=0.0516;MQ=52.89;MQ0=16;MQRankSum=-0.656;QD=10.24;ReadPosRankSum=2.883;VQSLOD=3.9019;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:23,3:47:5.76:143,6,0	1/1:9,0:15:12:158,12,0	1/1:47,0:21:0.47:1,0,0	0/0:45,0:10:0:0,0,0	1/1:9,18:30:16.60:351,17,0	1/1:16,1:28:9.03:157,9,0	1/1:16,0:26:10.66:104,11,0	0/1:38,0:37:6.50:125,0,6	1/1:10,2:26:17.09:267,17,0	1/1:23,2:33:11.64:512,12,0	0/1:7,15:22:17.80:506,0,18	1/1:12,6:18:9.03:204,9,0	1/1:7,14:24:23.03:391,23,0	1/1:13,11:25:9.03:202,9,0	1/1:8,19:29:37.81:749,38,0	1/1:12,14:29:4.65:512,5,0	0/1:18,0:20:4.70:193,0,5	1/1:8,7:15:6.02:143,6,0	1/1:17,0:14:6.01:55,6,0	1/1:23,0:23:12:138,12,0	0/1:25,20:52:4.17:350,0,4	1/1:10,10:23:20.54:383,21,0	1/1:8,11:19:7.81:213,8,0	1/1:19,11:30:8.02:386,8,0	1/1:12,1:22:7.12:115,7,0	1/1:27,0:28:47.45:623,47,0	1/1:12,6:19:10.92:167,11,0	1/1:10,2:14:19.90:277,20,0
chr10	7927928	.	CT	C	3427.44	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=6.131;DP=680;FS=2.485;HRun=1;HaplotypeScore=74.6577;InbreedingCoeff=0.9180;MQ=86.58;MQ0=0;MQRankSum=-0.769;QD=36.46;ReadPosRankSum=0.730;VQSLOD=4.0926;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,117,1841	0/0:14,0:14:42.12:0,42,625	0/0:21,0:21:63.07:0,63,931	0/0:27,0:26:49.98:0,50,991	0/0:32,0:32:96.31:0,96,1512	0/0:30,0:30:90.29:0,90,1416	0/0:16,0:16:48.16:0,48,768	0/0:30,0:30:87.29:0,87,1372	0/0:36,0:36:99:0,108,1727	0/0:30,0:30:87.29:0,87,1373	0/0:21,0:21:63.21:0,63,1007	0/0:24,0:24:72.25:0,72,1141	0/0:22,0:22:66.23:0,66,1053	0/0:24,0:24:72.25:0,72,1151	0/0:26,0:26:78.27:0,78,1245	0/0:29,0:29:87.28:0,87,1368	0/0:15,0:15:45.12:0,45,669	0/0:7,0:7:18.06:0,18,278	0/0:18,0:18:54.18:0,54,857	0/0:29,0:29:81.28:0,81,1295	1/1:0,27:27:69.23:964,69,0	0/0:40,0:40:99:0,120,1919	0/0:19,0:19:57.19:0,57,911	0/0:21,0:21:63.21:0,63,1007	0/0:16,0:16:48.15:0,48,744	1/1:2,32:34:3.34:1187,3,0	1/1:1,30:31:87.19:1192,87,0	1/1:0,2:2:6.02:84,6,0
chr10	7928320	.	TTACTAC	T	5394.17	PASS	AB=0.825;AC=41;AF=0.820;AN=50;BaseQRankSum=-1.433;DP=595;FS=5.319;HRun=0;HaplotypeScore=131.7651;InbreedingCoeff=0.4073;MQ=56.17;MQ0=16;MQRankSum=-2.786;QD=11.63;ReadPosRankSum=2.247;VQSLOD=3.7045;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:29:23.54:0,24,145	1/1:5,0:11:15.04:194,15,0	./.	./.	1/1:10,0:21:15.94:209,16,0	1/1:13,0:20:9.02:101,9,0	./.	0/0:22,0:22:8.04:0,8,42	1/1:7,0:22:7.77:100,8,0	1/1:19,13:32:39.09:665,39,0	1/1:12,13:25:29.57:246,30,0	1/1:6,16:23:24.05:425,24,0	1/1:11,13:24:24.08:480,24,0	1/1:9,16:25:18.06:332,18,0	1/1:8,0:27:33.11:454,33,0	1/1:10,0:21:12.04:167,12,0	0/1:13,0:13:2.97:145,0,3	0/1:11,0:17:18.65:107,0,19	0/1:9,0:13:12.80:77,0,13	1/1:14,0:25:13.12:180,13,0	0/0:10,8:18:0:0,0,0	1/1:11,7:18:14.88:177,15,0	1/1:15,11:26:8.43:140,8,0	1/1:7,7:14:6.02:121,6,0	1/1:5,0:21:24:280,24,0	1/1:14,7:21:21.03:310,21,0	1/1:10,15:25:20.90:422,21,0	1/1:9,10:19:3.01:60,3,0
chr10	7928564	.	GATAA	G	875.40	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.862;DP=642;FS=1.777;HRun=0;HaplotypeScore=103.0785;InbreedingCoeff=0.9759;MQ=81.57;MQ0=0;MQRankSum=-2.039;QD=31.26;ReadPosRankSum=1.222;VQSLOD=3.7028;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,26:28:54.19:970,54,0	0/0:12,0:12:36.12:0,36,867	0/0:24,0:24:57.18:0,57,1294	0/0:20,0:20:13.42:0,13,737	0/0:24,0:24:60.21:0,60,1533	0/0:15,0:15:45.15:0,45,1149	0/0:11,0:11:33.10:0,33,779	0/0:34,0:34:84.28:0,84,2083	0/0:22,0:22:63.19:0,63,1543	0/0:27,0:27:72.24:0,72,1718	0/0:30,0:30:75.26:0,75,1919	0/0:30,0:30:78.22:0,78,1914	0/0:20,0:20:57.18:0,57,1427	0/0:22,0:22:54.19:0,54,1402	0/0:31,0:31:78.22:0,78,1895	0/0:10,0:10:27.08:0,27,647	0/0:19,0:19:51.18:0,51,1294	0/0:15,0:15:39.07:0,39,959	0/0:28,0:27:60.20:0,60,1501	0/0:42,0:42:99:0,114,2751	0/0:17,0:17:48.16:0,48,1221	0/0:22,0:22:63.20:0,63,1466	0/0:20,0:20:48.16:0,48,1236	0/0:30,0:30:81.22:0,81,1967	0/0:21,0:21:57.18:0,57,1353	0/0:18,0:18:48.16:0,48,1197	0/0:34,0:34:93.32:0,93,2315	0/0:16,0:16:30.08:0,30,686
chr10	7929287	.	GAAAA	G	16526.66	PASS	AB=0.511;AC=27;AF=0.482;AN=56;BaseQRankSum=17.548;DP=644;FS=1.307;HRun=4;HaplotypeScore=115.7911;InbreedingCoeff=0.9228;MQ=86.67;MQ0=0;MQRankSum=-6.857;QD=51.33;ReadPosRankSum=5.695;VQSLOD=2.8483;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,17:17:36.12:753,36,0	0/0:19,0:19:57.20:0,57,1615	0/0:24,0:24:71.27:0,71,1860	0/0:22,0:22:60.20:0,60,1564	0/0:22,0:22:66.21:0,66,1806	0/0:24,0:24:72.23:0,72,1871	0/0:18,0:18:54.17:0,54,1472	0/0:29,0:29:87.29:0,87,2447	0/0:26,0:26:78.27:0,78,2217	1/1:0,37:37:99:2230,111,0	1/1:0,20:20:42.14:880,42,0	1/1:0,22:22:60.21:1257,60,0	1/1:0,30:30:84.29:1759,84,0	1/1:0,26:26:66.23:1361,66,0	0/0:22,0:22:66.21:0,66,1851	0/0:22,0:22:66.23:0,66,1873	0/0:19,0:19:57.20:0,57,1602	1/1:0,19:19:42.14:881,42,0	0/0:23,0:23:66.23:0,66,1900	0/0:20,0:20:60.21:0,60,1668	1/1:0,19:19:36.12:755,36,0	1/1:0,26:26:57.20:1194,57,0	1/1:0,32:32:84.29:1760,84,0	1/1:0,13:13:27.09:566,27,0	0/0:32,0:32:96.33:0,96,2735	0/1:1,23:24:14.53:1373,0,15	1/1:0,31:31:75.26:1568,75,0	1/1:0,6:6:9.03:189,9,0
chr10	7929462	.	TC	T	7400.76	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=6.561;DP=491;FS=5.291;HRun=4;HaplotypeScore=52.9919;InbreedingCoeff=0.9869;MQ=90.13;MQ0=0;MQRankSum=-3.123;QD=32.32;ReadPosRankSum=0.668;VQSLOD=5.2638;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:39.11:0,39,526	1/1:0,4:4:12.04:144,12,0	0/0:21,0:21:45.15:0,45,622	0/0:19,0:19:47.97:0,48,615	1/1:0,19:19:57.14:669,57,0	1/1:1,19:20:54.15:637,54,0	1/1:2,10:12:27.05:309,27,0	1/1:1,23:24:66.17:759,66,0	1/1:0,19:19:57.17:683,57,0	0/0:12,0:12:30.10:0,30,419	0/0:11,0:11:33.11:0,33,460	0/0:17,0:17:51.17:0,51,714	0/0:32,0:32:87.28:0,87,1189	0/0:30,0:30:90.30:0,90,1259	1/1:1,26:27:75.23:900,75,0	1/1:1,25:26:69.21:828,69,0	1/1:1,21:22:60.18:719,60,0	0/0:11,0:11:30.10:0,30,420	1/1:0,17:17:51.14:599,51,0	1/1:1,23:24:63.11:722,63,0	0/0:13,0:13:39.12:0,39,529	0/0:12,0:12:33.11:0,33,461	0/0:13,0:13:39.13:0,39,545	0/0:10,0:10:30.10:0,30,420	1/1:0,15:15:36.11:432,36,0	0/0:15,1:16:9.21:0,9,552	0/0:25,0:25:72.17:0,72,974	0/0:7,0:7:21.07:0,21,294
chr10	7929836	.	CAG	C	337.01	PASS	AB=0.865;AC=12;AF=0.240;AN=50;BaseQRankSum=2.503;DP=518;FS=2.680;HRun=0;HaplotypeScore=120.2561;InbreedingCoeff=0.3886;MQ=62.28;MQ0=6;MQRankSum=-1.784;QD=2.07;ReadPosRankSum=3.547;VQSLOD=2.3245;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:17:5.31:28,5,0	0/0:3,0:9:6:0,6,52	./.	./.	1/1:25,0:25:6.74:21,7,0	0/0:14,0:14:26.91:0,27,214	0/0:21,0:21:29.94:0,30,256	./.	0/0:16,0:16:14.94:0,15,119	0/0:21,0:20:5.95:0,6,47	0/0:21,0:21:21.12:0,21,359	0/0:17,0:17:15.19:0,15,274	0/0:19,1:20:3.53:0,4,362	0/0:14,0:15:9.97:0,10,297	1/1:20,0:20:19.75:95,20,0	1/1:18,0:18:8.52:42,9,0	0/0:23,0:23:20.97:0,21,171	0/1:16,5:21:99:132,0,170	0/0:20,0:20:11.55:0,12,79	0/0:15,0:16:17.98:0,18,161	0/0:22,3:24:13.92:0,14,87	0/1:15,2:18:63.36:63,0,191	0/0:13,1:13:15.03:0,15,190	0/1:19,3:22:98.26:98,0,216	0/0:21,0:21:17.73:0,18,161	0/1:19,2:22:8.50:9,0,212	0/0:13,0:24:24.03:0,24,251	0/0:6,0:7:3:0,3,26
chr10	7929838	.	G	GAGAGAA	5287.31	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=-0.063;DP=550;FS=2.793;HRun=0;HaplotypeScore=155.6959;InbreedingCoeff=0.7402;MQ=61.36;MQ0=6;MQRankSum=-5.734;QD=21.67;ReadPosRankSum=-1.790;VQSLOD=4.5959;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:32.94:0,33,319	1/1:9,0:9:12.47:245,12,0	0/0:14,0:7:17.95:0,18,161	0/0:17,0:10:11.12:0,11,129	1/1:25,0:25:56.64:445,57,0	1/1:16,0:16:5.55:315,6,0	0/1:21,0:21:43.95:285,0,44	1/1:18,0:17:38.86:324,39,0	1/1:4,15:20:21.07:627,21,0	0/0:22,0:21:53.62:0,54,519	0/0:23,0:23:60.01:0,60,801	0/0:17,0:17:42.02:0,42,559	0/0:21,0:21:60:0,60,819	0/0:17,0:17:44.68:0,45,673	0/1:20,0:20:76.08:244,0,76	0/1:18,0:18:26.40:227,0,26	1/1:7,17:26:27.09:772,27,0	0/0:21,0:21:53.91:0,54,675	1/1:7,13:22:19.42:503,19,0	1/1:22,0:22:53.98:676,54,0	0/0:25,0:24:52.81:0,53,401	0/0:18,0:18:50.32:0,50,552	0/0:15,0:14:35.37:0,35,451	0/0:23,0:23:59.96:0,60,851	1/1:7,17:27:35.44:623,35,0	0/0:23,0:23:49.46:0,49,431	0/0:24,0:24:19.64:0,20,396	0/0:7,0:7:20.72:0,21,161
chr10	7929840	.	G	GAGAA	4681.12	PASS	AB=0.821;AC=21;AF=0.375;AN=56;BaseQRankSum=-0.944;DP=556;FS=2.842;HRun=0;HaplotypeScore=145.1387;InbreedingCoeff=0.5857;MQ=59.31;MQ0=7;MQRankSum=-4.574;QD=17.40;ReadPosRankSum=0.252;VQSLOD=4.7827;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:35.87:0,36,309	1/1:9,0:9:12.47:175,12,0	0/0:13,0:6:17.95:0,18,161	0/0:16,0:9:11.12:0,11,129	1/1:25,0:25:56.64:445,57,0	0/1:7,12:20:14.74:491,0,15	0/1:5,14:21:14.26:494,0,14	1/1:18,0:17:38.86:324,39,0	1/1:20,0:20:21.07:372,21,0	0/0:24,0:23:59.57:0,60,548	0/0:23,0:23:65.37:0,65,747	0/0:17,0:17:42.02:0,42,505	0/0:21,0:21:63.01:0,63,752	0/0:17,0:17:47.83:0,48,610	0/1:20,0:20:8.47:246,0,8	1/1:18,0:18:13.75:242,14,0	1/1:23,2:25:27.09:552,27,0	0/0:21,0:21:53.90:0,54,588	1/1:19,0:19:20.23:392,20,0	1/1:22,1:23:1.58:519,2,0	0/0:26,0:24:53.87:0,54,438	0/0:18,0:18:51.41:0,51,532	0/0:16,0:15:36:0,36,423	0/0:22,0:22:60.04:0,60,736	0/1:25,2:27:32.14:411,0,32	0/0:22,0:22:48.28:0,48,420	0/1:24,0:24:16.60:17,0,316	0/0:9,0:9:17.98:0,18,149
chr10	7929842	.	G	GAA	3219.64	PASS	AB=0.980;AC=18;AF=0.321;AN=56;BaseQRankSum=2.260;DP=564;FS=1.685;HRun=1;HaplotypeScore=130.4254;InbreedingCoeff=0.3876;MQ=57.07;MQ0=9;MQRankSum=-4.412;QD=12.29;ReadPosRankSum=2.155;VQSLOD=0.7947;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:38.54:0,39,295	0/1:8,0:8:5.99:73,0,6	0/0:13,0:6:17.95:0,18,161	0/0:15,0:7:11.13:0,11,130	1/1:25,0:25:56.64:446,57,0	0/1:19,2:21:8.19:357,0,8	1/1:18,2:19:12.43:313,12,0	1/1:15,0:14:38.86:324,39,0	0/1:20,0:20:0.94:147,0,1	0/0:25,0:24:65.59:0,66,596	0/0:25,0:25:68.99:0,69,711	0/0:17,0:17:45.48:0,45,475	0/0:22,0:22:65.99:0,66,687	0/0:20,0:20:50.59:0,51,551	1/1:20,0:20:38.65:308,39,0	1/1:16,0:16:38.56:284,39,0	0/1:23,1:24:24.83:255,0,25	0/0:21,0:21:53.82:0,54,496	0/1:19,0:19:63.37:258,0,63	0/1:23,0:23:55.05:344,0,55	0/0:26,0:24:56.87:0,57,464	0/0:19,0:19:50.53:0,51,474	0/0:17,0:16:41.99:0,42,427	0/0:22,0:22:62.85:0,63,643	0/1:26,1:27:15.15:246,0,15	0/0:23,0:23:35.42:0,35,450	0/1:24,0:24:51.61:52,0,279	0/0:10,0:10:1.65:0,2,172
chr10	7929845	.	AGAGAGAGAGAG	A	1241.50	PASS	AB=0.704;AC=3;AF=0.054;AN=56;BaseQRankSum=6.475;DP=568;FS=0.784;HRun=0;HaplotypeScore=216.6440;InbreedingCoeff=-0.0596;MQ=55.77;MQ0=10;MQRankSum=-5.974;QD=21.41;ReadPosRankSum=3.502;VQSLOD=2.7485;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:44.68:0,45,1183	0/0:8,0:8:8.99:0,9,449	0/0:14,0:6:18.06:0,18,229	0/0:16,0:6:17.87:0,18,183	0/1:12,11:24:99:352,0,108	0/0:21,0:21:42.14:0,42,2076	0/0:20,0:19:30.10:0,30,1652	0/0:16,0:15:37.58:0,38,221	0/0:24,0:24:29.94:0,30,1214	0/0:25,0:24:72.23:0,72,2346	0/0:25,0:25:69.23:0,69,2985	0/0:16,0:16:42.61:0,43,1776	0/0:23,0:23:69.24:0,69,3100	0/0:22,0:22:56.85:0,57,2071	0/1:9,10:19:48.21:677,0,48	0/1:11,4:15:99:313,0,102	0/0:24,0:24:30.10:0,30,1550	0/0:22,0:22:57.17:0,57,2005	0/0:17,0:17:49.66:0,50,1828	0/0:23,0:23:56.73:0,57,2150	0/0:25,0:23:54.18:0,54,1852	0/0:19,0:19:54.12:0,54,2475	0/0:18,0:17:45.15:0,45,1669	0/0:22,0:22:62.98:0,63,2499	0/0:25,0:25:30.08:0,30,1571	0/0:23,0:23:67.78:0,68,2597	0/0:25,0:25:57.19:0,57,2154	0/0:10,0:10:30.10:0,30,818
chr10	7930645	.	AAAAAAAG	A	1301.82	PASS	AB=0.989;AC=13;AF=0.232;AN=56;BaseQRankSum=5.374;DP=523;FS=5.637;HRun=0;HaplotypeScore=120.6764;InbreedingCoeff=-0.0487;MQ=49.55;MQ0=19;MQRankSum=-2.345;QD=5.54;ReadPosRankSum=5.729;VQSLOD=1.5688;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:33,2:34:99:279,0,253	0/0:10,0:9:11.93:0,12,151	0/0:22,0:6:9.05:0,9,119	0/1:28,0:8:1.15:1,0,64	0/0:26,0:26:35.16:0,35,439	0/0:26,0:25:39.08:0,39,910	0/0:13,0:12:24.06:0,24,392	0/0:28,0:27:40.22:0,40,644	0/0:11,0:11:28.80:0,29,421	0/1:22,0:22:28.27:28,0,336	0/1:18,0:17:20.18:20,0,159	0/1:12,0:12:11.51:12,0,16	0/1:17,0:15:6.72:7,0,139	0/0:12,0:12:4.73:0,5,48	0/0:18,0:18:29.69:0,30,288	0/0:23,0:22:38.03:0,38,372	0/0:25,0:22:55.77:0,56,1040	0/0:17,0:15:5.48:0,5,125	0/0:15,0:14:42.13:0,42,762	0/0:17,0:17:40.90:0,41,741	0/0:6,0:6:7.76:0,8,28	0/1:18,0:18:26.20:26,0,157	0/1:13,0:13:20.31:20,0,112	0/1:9,0:8:10.76:11,0,52	0/0:19,0:19:49.89:0,50,1001	0/1:25,0:25:3.92:397,0,4	1/1:22,1:22:21.54:445,22,0	0/1:14,1:13:13.53:206,0,14
chr10	7930646	.	AAAAAAG	A	1653.32	PASS	AB=0.990;AC=16;AF=0.286;AN=56;BaseQRankSum=7.312;DP=503;FS=7.006;HRun=0;HaplotypeScore=107.9565;InbreedingCoeff=0.0607;MQ=51.68;MQ0=14;MQRankSum=-4.916;QD=7.62;ReadPosRankSum=7.792;VQSLOD=0.3412;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:35,0:34:99:139,0,265	0/0:10,0:9:11.63:0,12,114	0/0:22,0:6:11.02:0,11,122	0/0:29,0:9:1.82:0,2,76	0/0:25,1:26:26.82:0,27,325	0/0:26,0:25:39.08:0,39,776	0/0:12,0:12:24.05:0,24,333	0/0:29,0:28:29.16:0,29,518	0/0:11,0:11:28.22:0,28,360	0/1:21,1:22:99:126,0,277	0/1:18,0:17:83.65:84,0,130	0/1:8,0:8:12.40:36,0,12	0/1:16,1:15:53.42:53,0,95	0/1:8,0:8:10.54:11,0,24	0/0:18,0:18:18.44:0,18,204	0/0:21,0:21:27.90:0,28,212	0/0:25,0:22:52.28:0,52,868	0/1:15,0:14:2.06:2,0,95	0/0:15,0:14:42.13:0,42,649	0/0:17,0:17:40.33:0,40,622	0/0:6,0:6:3.49:0,3,8	0/1:15,0:15:57.85:58,0,109	0/1:10,0:10:27.82:28,0,62	0/1:9,0:8:39.64:40,0,47	0/0:19,0:19:49.47:0,49,896	1/1:22,3:25:15.08:490,15,0	1/1:18,4:21:30.36:510,30,0	1/1:5,8:13:0.82:240,1,0
chr10	7930647	.	AAAAAG	A	1555.49	PASS	AB=0.989;AC=16;AF=0.286;AN=56;BaseQRankSum=7.646;DP=487;FS=3.618;HRun=0;HaplotypeScore=97.2989;InbreedingCoeff=0.0917;MQ=53.67;MQ0=14;MQRankSum=-5.239;QD=7.27;ReadPosRankSum=7.389;VQSLOD=0.8304;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:31,0:30:79.29:79,0,290	0/0:10,0:9:11.72:0,12,96	0/0:23,0:7:14.04:0,14,138	0/0:29,0:9:1.66:0,2,70	0/1:23,0:23:0.78:1,0,197	0/0:26,0:25:39.02:0,39,650	0/0:12,0:12:23.82:0,24,264	0/0:28,0:27:16.59:0,17,414	0/0:11,0:11:27.86:0,28,308	0/1:20,1:21:99:156,0,259	0/1:18,0:17:73.49:73,0,149	0/1:7,0:7:11.80:36,0,12	0/1:16,0:14:81.23:90,0,81	0/1:9,0:9:27.37:27,0,33	0/0:16,1:17:3.18:0,3,136	0/0:20,1:21:19.90:0,20,147	0/0:25,0:22:51.90:0,52,737	0/0:14,0:13:6.64:0,7,79	0/0:15,0:14:42.09:0,42,523	0/0:18,0:18:42.93:0,43,533	0/0:5,0:5:1.41:0,1,3	0/1:13,1:14:87.29:103,0,87	0/1:10,0:10:24.94:25,0,50	0/1:9,0:8:24.68:25,0,46	0/0:19,0:19:49.04:0,49,761	1/1:23,1:24:20.88:450,21,0	1/1:19,2:20:30.41:455,30,0	1/1:11,0:11:14.85:202,15,0
chr10	7932758	.	AAC	A	5607.29	PASS	AB=0.730;AC=37;AF=0.712;AN=52;BaseQRankSum=-3.241;DP=830;FS=0.000;HRun=0;HaplotypeScore=154.6455;InbreedingCoeff=0.4477;MQ=62.18;MQ0=32;MQRankSum=3.356;QD=9.59;ReadPosRankSum=4.187;VQSLOD=4.6110;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:29:25.20:0,25,226	1/1:6,0:6:6.02:67,6,0	./.	./.	1/1:15,7:21:2.51:33,3,0	0/1:8,11:20:18.35:203,0,18	0/1:17,12:34:2.27:289,0,2	0/1:23,0:21:11.16:34,0,11	1/1:15,16:31:38.94:412,39,0	1/1:21,13:34:41.89:432,42,0	1/1:6,7:14:6.02:67,6,0	1/1:22,15:38:35.72:347,36,0	1/1:14,12:27:12.50:199,13,0	0/1:19,18:43:0.83:344,0,1	1/1:13,15:30:26.90:280,27,0	0/1:24,12:39:70.18:503,0,70	1/1:10,21:30:36.10:399,36,0	1/1:13,17:33:47.63:474,48,0	1/1:14,4:18:7.64:97,8,0	1/1:18,12:31:26.36:252,26,0	0/0:59,0:54:8.54:0,9,60	1/1:12,7:20:14.87:147,15,0	1/1:11,8:19:20.73:210,21,0	1/1:17,28:45:57.15:632,57,0	1/1:11,9:20:18.01:186,18,0	0/0:26,0:25:25.71:0,26,147	0/0:12,0:30:7.31:0,7,40	0/0:7,0:7:2.37:0,2,8
chr10	7933203	.	GCTATGA	G	15418.83	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=19.159;DP=622;FS=13.006;HRun=0;HaplotypeScore=154.0063;InbreedingCoeff=0.9754;MQ=71.87;MQ0=0;MQRankSum=-19.019;QD=59.76;ReadPosRankSum=-0.224;VQSLOD=4.5921;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,31:33:81.28:1942,81,0	0/0:19,0:19:57.20:0,57,2055	0/0:19,0:19:54.19:0,54,1868	0/0:21,0:21:42.52:0,43,1576	0/0:33,0:33:96.33:0,96,3421	0/0:23,0:23:66.23:0,66,2258	0/0:31,0:31:87.30:0,87,2897	0/0:32,0:32:96.33:0,96,3243	0/0:24,0:24:72.25:0,72,2530	1/1:2,25:27:72.22:1653,72,0	1/1:0,15:15:36.12:829,36,0	1/1:1,19:20:54.19:1283,54,0	1/1:0,14:14:42.14:1008,42,0	1/1:1,25:26:66.23:1584,66,0	0/0:44,0:44:99:0,129,4512	0/0:20,0:20:57.20:0,57,1988	0/0:25,0:24:72.25:0,72,2531	1/1:1,14:15:36.12:862,36,0	0/0:15,0:15:39.13:0,39,1351	0/0:27,0:27:78.27:0,78,2767	1/1:2,11:13:27.09:647,27,0	1/1:0,20:20:60.21:1436,60,0	1/1:2,26:28:63.22:1509,63,0	1/1:2,10:12:21:504,21,0	0/0:31,0:31:93.32:0,93,3347	1/1:2,14:16:42.13:940,42,0	1/1:2,16:18:48.16:1150,48,0	1/1:0,1:1:3.01:72,3,0
chr10	7934924	.	TAC	T	5079.48	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-1.711;DP=769;FS=4.328;HRun=0;HaplotypeScore=156.4090;InbreedingCoeff=0.9955;MQ=89.30;MQ0=0;MQRankSum=-3.805;QD=35.52;ReadPosRankSum=1.277;VQSLOD=6.3508;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,120,2198	0/0:6,0:6:15.05:0,15,275	0/0:27,0:27:75.23:0,75,1272	0/0:30,0:30:78.16:0,78,1220	1/1:3,27:30:69.23:988,69,0	0/0:23,0:23:69.24:0,69,1264	0/0:26,0:26:78.15:0,78,1309	1/1:4,42:46:99:1599,117,0	0/0:31,0:31:90.26:0,90,1537	0/0:40,0:40:99:0,114,2090	0/0:19,0:19:57.20:0,57,1037	0/0:28,0:28:72.23:0,72,1288	0/0:34,0:34:99:0,99,1774	0/0:30,0:30:87.30:0,87,1579	1/1:2,28:30:72.24:1031,72,0	1/1:0,37:37:99:1461,102,0	0/0:32,0:32:96.29:0,96,1683	0/0:14,0:14:42.14:0,42,752	0/0:28,0:28:84.27:0,84,1473	0/0:31,0:31:90.29:0,90,1613	0/0:27,0:27:72.25:0,72,1310	0/0:16,0:16:48.16:0,48,879	0/0:28,0:28:84.27:0,84,1508	0/0:22,0:22:63.22:0,63,1155	0/0:32,0:32:96.28:0,96,1669	0/0:24,0:24:69.24:0,69,1262	0/0:25,0:25:75.26:0,75,1363	0/0:13,0:13:36.12:0,36,659
chr10	7935824	.	A	AC	23016.06	PASS	AB=0.913;AC=45;AF=0.804;AN=56;BaseQRankSum=18.696;DP=766;FS=0.651;HRun=1;HaplotypeScore=186.0553;InbreedingCoeff=0.8865;MQ=82.97;MQ0=0;MQRankSum=-8.380;QD=37.98;ReadPosRankSum=6.516;VQSLOD=3.9387;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,49:53:99:1908,129,0	1/1:1,8:9:24.04:335,24,0	0/0:26,0:26:78.23:0,78,987	0/0:31,0:31:87.28:0,87,1109	0/0:27,0:27:81.26:0,81,1052	1/1:0,27:27:78.26:1169,78,0	1/1:1,25:26:75.25:1116,75,0	0/0:40,0:39:99:0,114,1480	1/1:2,21:23:54.18:809,54,0	1/1:0,21:21:63.21:943,63,0	1/1:2,17:19:48.16:719,48,0	1/1:3,29:32:90.30:1346,90,0	1/1:2,25:27:75.25:1105,75,0	1/1:0,25:25:72.24:1078,72,0	0/0:36,0:36:99:0,108,1389	0/1:19,2:21:29.76:30,0,641	1/1:1,28:29:72.20:1054,72,0	1/1:2,15:17:40.22:667,40,0	1/1:3,13:15:48.09:665,48,0	1/1:2,24:26:75.25:1104,75,0	1/1:1,37:38:99:1574,105,0	1/1:3,29:32:66.22:989,66,0	1/1:0,27:27:72.24:1078,72,0	1/1:1,27:28:81.23:1189,81,0	1/1:4,32:36:78.26:1161,78,0	1/1:2,22:24:66.22:980,66,0	1/1:3,32:34:99:1458,99,0	1/1:0,15:15:36.12:539,36,0
chr10	7936303	.	CGTGTGTGT	C	5606.22	PASS	AB=0.664;AC=22;AF=0.407;AN=54;BaseQRankSum=10.089;DP=696;FS=9.345;HRun=0;HaplotypeScore=205.3192;InbreedingCoeff=0.8246;MQ=63.47;MQ0=4;MQRankSum=-10.819;QD=20.61;ReadPosRankSum=-0.798;VQSLOD=3.3559;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:39:25.64:0,26,547	1/1:7,3:10:9.03:224,9,0	./.	0/0:19,0:11:9.03:0,9,127	1/1:20,0:37:13.29:280,13,0	1/1:14,14:28:24.08:575,24,0	0/1:12,6:18:14.02:294,0,14	1/1:20,0:26:12.30:57,12,0	0/1:6,15:22:6.07:1061,0,6	0/0:28,0:28:36.11:0,36,1116	0/0:26,0:26:41.09:0,41,1573	0/0:25,0:25:45.15:0,45,1614	0/0:21,0:21:21.07:0,21,672	0/0:23,0:23:48.16:0,48,1481	1/1:9,0:27:32.54:642,33,0	1/1:12,0:30:27.27:781,27,0	1/1:9,3:12:11.87:298,12,0	0/0:18,0:17:38.34:0,38,1052	1/1:12,1:14:9.03:204,9,0	1/1:15,11:26:33.07:740,33,0	0/0:42,0:43:57.18:0,57,1717	0/0:22,0:21:42.14:0,42,1491	0/0:27,0:27:42.14:0,42,1454	0/0:38,0:38:87.30:0,87,3055	1/1:11,8:21:20.96:449,21,0	0/0:27,0:28:48.12:0,48,1249	0/0:25,0:26:48.16:0,48,1797	0/0:10,0:13:30.10:0,30,829
chr10	7936343	.	TGC	T	1912.86	PASS	AB=0.976;AC=11;AF=0.196;AN=56;BaseQRankSum=-0.987;DP=630;FS=2.980;HRun=0;HaplotypeScore=145.9157;InbreedingCoeff=-0.1065;MQ=56.80;MQ0=8;MQRankSum=2.534;QD=8.43;ReadPosRankSum=-2.445;VQSLOD=2.9932;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:32:62.87:0,63,500	0/1:6,0:6:1.83:2,0,72	0/0:21,0:10:29.86:0,30,273	0/0:19,0:11:28.30:0,28,284	0/0:32,0:32:55.20:0,55,400	0/0:21,0:21:19.47:0,19,148	0/0:16,0:16:26.75:0,27,232	0/0:27,0:26:65.78:0,66,559	0/0:25,0:25:41.64:0,42,261	1/1:30,1:31:1.08:503,1,0	0/1:21,1:22:99:179,0,139	0/1:26,1:27:99:288,0,137	0/1:16,0:16:44.08:184,0,44	0/1:17,2:19:99:154,0,146	0/0:26,0:26:34.83:0,35,235	0/0:30,0:30:35.02:0,35,305	0/0:15,0:15:10.87:0,11,196	0/1:16,0:16:96.88:141,0,97	0/0:7,0:7:17.50:0,17,119	0/0:20,0:20:28.62:0,29,195	0/0:31,0:30:52.99:0,53,871	0/1:18,0:18:10.92:11,0,178	0/1:24,1:25:99:230,0,112	0/1:47,0:46:99:360,0,314	0/0:17,0:17:30.74:0,31,182	0/0:21,0:21:62.82:0,63,744	0/0:28,0:28:78.99:0,79,1067	0/0:14,0:14:0.02:0,0,332
chr10	7936619	.	C	CT	4502.92	PASS	AB=0.795;AC=16;AF=0.286;AN=56;BaseQRankSum=-13.280;DP=622;FS=8.540;HRun=9;HaplotypeScore=71.0342;InbreedingCoeff=0.8880;MQ=67.07;MQ0=0;MQRankSum=-0.457;QD=23.70;ReadPosRankSum=-1.518;VQSLOD=4.9474;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:86.96:0,87,751	1/1:2,8:10:18.05:199,18,0	0/1:13,0:13:1.20:1,0,184	0/0:10,1:9:17.87:0,18,145	0/0:6,0:26:36.43:0,36,107	1/1:1,25:26:69.19:763,69,0	0/1:8,18:26:0.95:445,0,1	0/0:6,0:31:39.21:0,39,123	1/1:3,18:21:57.15:630,57,0	0/0:26,0:26:59.98:0,60,521	0/0:28,0:28:74.98:0,75,651	0/0:19,0:20:52.97:0,53,440	0/0:23,0:23:59.97:0,60,521	0/0:14,0:14:35.12:0,35,310	0/0:2,0:31:57.04:0,57,168	0/0:1,0:23:40.74:0,41,119	1/1:2,19:21:31.12:571,31,0	0/0:30,0:30:74.96:0,75,651	1/1:2,19:21:54.85:559,55,0	1/1:6,30:35:59.06:871,59,0	0/0:17,0:17:8.89:0,9,306	0/0:24,0:24:59.91:0,60,508	0/0:25,0:25:68.98:0,69,599	0/0:21,0:20:59.99:0,60,521	1/1:0,16:16:42.11:465,42,0	0/0:23,0:23:65.99:0,66,573	0/0:20,0:20:53.99:0,54,469	0/0:6,0:6:18:0,18,156
chr10	7937253	.	A	AT	10106.19	PASS	AB=0.625;AC=27;AF=0.482;AN=56;BaseQRankSum=1.292;DP=684;FS=2.943;HRun=8;HaplotypeScore=95.8913;InbreedingCoeff=0.9281;MQ=76.02;MQ0=0;MQRankSum=-2.471;QD=28.71;ReadPosRankSum=2.062;VQSLOD=4.5417;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,31:32:87.26:1003,87,0	0/0:8,0:8:21.01:0,21,192	0/0:12,0:12:16:0,16,163	0/0:22,0:22:35.46:0,35,405	0/0:29,0:29:81.04:0,81,741	0/0:18,0:18:51.02:0,51,467	0/0:29,0:29:78.01:0,78,705	0/0:27,0:27:62.99:0,63,565	0/0:28,0:28:81.03:0,81,737	1/1:3,26:29:78.21:888,78,0	1/1:5,20:25:57.17:658,57,0	1/1:2,20:22:57.17:658,57,0	1/1:7,23:31:66.09:761,66,0	1/1:6,27:33:81.21:917,81,0	0/0:33,0:33:87.04:0,87,796	0/0:27,0:27:66.02:0,66,601	0/0:27,0:27:81.04:0,81,741	0/1:2,3:5:15.40:92,0,15	0/0:22,0:22:54:0,54,487	0/0:35,0:35:96.03:0,96,874	1/1:1,16:17:45.13:519,45,0	1/1:0,24:24:66.15:747,66,0	1/1:2,28:29:81.24:935,81,0	1/1:1,17:18:51.15:589,51,0	0/0:15,0:15:33.01:0,33,302	1/1:1,28:29:81.24:935,81,0	1/1:9,25:34:50.60:817,51,0	1/1:2,20:22:51.15:589,51,0
chr10	7937710	.	CTTTG	C	5196.49	PASS	AB=0.511;AC=7;AF=0.125;AN=56;BaseQRankSum=-0.312;DP=709;FS=9.265;HRun=0;HaplotypeScore=155.1744;InbreedingCoeff=0.8415;MQ=80.92;MQ0=0;MQRankSum=-4.917;QD=45.99;ReadPosRankSum=0.875;VQSLOD=5.0628;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,105,2756	0/0:22,0:22:57.20:0,57,1475	0/0:23,0:23:56:0,56,1344	0/0:20,0:21:54.06:0,54,1108	1/1:3,27:30:75.26:1391,75,0	0/0:33,0:33:96.32:0,96,2474	0/0:14,0:14:42.14:0,42,1102	1/1:3,30:33:90.29:1629,90,0	0/0:20,0:20:54.19:0,54,1361	0/0:29,0:29:84.29:0,84,2175	0/0:23,0:23:57.20:0,57,1521	0/0:28,0:28:81.25:0,81,1984	0/0:22,0:22:57.16:0,57,1301	0/0:32,0:32:90.30:0,90,2345	1/1:2,24:26:60.21:1120,60,0	0/1:1,23:24:15.64:1057,0,16	0/0:33,0:33:90.27:0,90,2271	0/0:25,0:25:75.26:0,75,1891	0/0:33,0:33:78.26:0,78,1987	0/0:39,0:38:99:0,102,2691	0/0:23,0:23:63.22:0,63,1647	0/0:23,0:23:66.23:0,66,1707	0/0:25,0:25:72.25:0,72,1777	0/0:16,0:16:42.14:0,42,1086	0/0:15,0:15:42.14:0,42,1101	0/0:18,0:18:51.17:0,51,1307	0/0:30,0:30:78.27:0,78,2069	0/0:12,0:12:36.12:0,36,853
chr10	7938749	.	ACCACCACTGCCCCCACC	A	29462.89	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=19.298;DP=707;FS=11.465;HRun=0;HaplotypeScore=349.0258;InbreedingCoeff=0.9985;MQ=76.23;MQ0=0;MQRankSum=-17.660;QD=93.24;ReadPosRankSum=4.102;VQSLOD=3.5804;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,14:21:42.14:2043,42,0	1/1:3,13:16:36.12:1705,36,0	0/0:20,0:19:45.15:0,45,2803	0/0:28,0:28:72.19:0,72,4089	1/1:3,19:22:39.04:1287,39,0	1/1:7,26:33:75.26:3602,75,0	1/1:3,20:23:45.15:2187,45,0	1/1:14,16:30:48.13:1673,48,0	1/1:4,28:32:75.26:3626,75,0	0/0:37,0:37:99:0,102,7677	0/0:22,0:22:60.21:0,60,4592	0/0:21,0:21:60.21:0,60,4721	0/0:41,0:41:99:0,111,8273	0/0:34,0:34:96.31:0,96,6601	1/1:3,26:29:72.25:3504,72,0	1/1:5,19:24:54.19:2628,54,0	1/1:3,9:12:18.02:750,18,0	0/0:18,0:18:54.19:0,54,4115	1/1:7,8:14:24.06:827,24,0	1/1:6,22:28:57.15:2385,57,0	0/0:33,0:33:81.28:0,81,6202	0/0:26,0:26:78.27:0,78,6080	0/0:17,0:17:45.15:0,45,3515	0/0:26,0:26:78.27:0,78,5834	1/1:3,28:31:72.20:3246,72,0	0/0:34,0:34:99:0,99,7287	0/0:23,0:23:63.22:0,63,4439	0/0:11,0:11:33.11:0,33,2600
chr10	7939991	.	CAAAA	C	2353.37	PASS	AB=0.875;AC=11;AF=0.196;AN=56;BaseQRankSum=3.117;DP=480;FS=6.977;HRun=14;HaplotypeScore=95.9272;InbreedingCoeff=0.9046;MQ=80.26;MQ0=0;MQRankSum=-2.439;QD=17.56;ReadPosRankSum=3.096;VQSLOD=1.9119;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,0:17:12.34:31,12,0	0/0:5,0:5:15.05:0,15,333	0/0:18,0:15:24.45:0,24,412	0/1:18,0:19:3.76:4,0,88	1/1:3,18:21:32.82:467,33,0	0/0:13,0:17:45.15:0,45,963	0/0:19,0:23:40.31:0,40,851	1/1:2,30:30:84.19:1094,84,0	0/0:14,0:17:48.16:0,48,931	0/0:14,0:16:41.97:0,42,719	0/0:9,0:11:24.08:0,24,500	0/0:6,0:12:18.04:0,18,274	0/0:24,0:26:72.20:0,72,1279	0/0:11,0:14:30.09:0,30,528	1/1:5,18:24:41.54:550,42,0	1/1:3,16:19:27.02:382,27,0	0/0:16,0:18:48.16:0,48,926	0/0:15,0:19:39.13:0,39,849	0/0:10,0:11:30.10:0,30,615	0/0:26,0:28:78.18:0,78,1441	0/0:2,0:10:23.57:0,24,161	0/0:8,0:12:36.11:0,36,593	0/0:10,0:13:33.11:0,33,574	0/0:12,0:15:32.94:0,33,578	0/0:14,0:15:42.14:0,42,834	0/0:2,0:13:33.75:0,34,284	0/0:7,0:18:25.81:0,26,187	0/0:1,0:13:33.34:0,33,209
chr10	7940429	.	G	GA	11306	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-4.978;DP=603;FS=15.396;HRun=8;HaplotypeScore=74.6515;InbreedingCoeff=0.8878;MQ=78.45;MQ0=3;MQRankSum=-8.601;QD=20.30;ReadPosRankSum=4.463;VQSLOD=3.7512;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,17:18:51.15:587,51,0	1/1:2,1:12:22.89:136,23,0	0/0:23,0:23:51.03:0,51,435	0/0:21,0:22:12.07:0,12,254	1/1:4,20:24:57.09:628,57,0	1/1:2,1:23:51.30:280,51,0	1/1:4,1:21:18.06:186,18,0	1/1:6,29:35:62.79:967,63,0	1/1:1,0:10:22.73:115,23,0	1/1:5,22:28:69.02:766,69,0	1/1:3,15:19:47.97:534,48,0	1/1:4,16:20:48.14:554,48,0	1/1:4,20:24:57.17:658,57,0	1/1:4,12:16:2.65:284,3,0	1/1:4,23:27:66.20:762,66,0	1/1:2,16:20:38.78:410,39,0	1/1:3,1:20:31.55:185,32,0	1/1:3,13:16:36.11:415,36,0	1/1:5,2:21:48.91:279,49,0	1/1:5,2:30:71.52:402,72,0	1/1:4,0:14:22.73:115,23,0	1/1:3,20:23:60.18:692,60,0	1/1:3,25:28:72.20:823,72,0	1/1:1,17:18:45.13:519,45,0	1/1:4,1:28:68.35:366,68,0	1/1:2,2:22:54.42:309,54,0	1/1:5,1:26:42.61:216,43,0	1/1:2,0:10:22.73:115,23,0
chr10	7942050	.	T	TCATCCTTAGGGTGATA	57399.57	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=-11.377;DP=666;FS=0.000;HRun=0;HaplotypeScore=268.8890;InbreedingCoeff=0.9843;MQ=74.07;MQ0=0;MQRankSum=-18.610;QD=146.43;ReadPosRankSum=-1.483;VQSLOD=4.1606;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:57.20:0,57,2467	1/1:4,8:9:27.09:2048,27,0	0/0:21,0:21:54.18:0,54,1837	0/0:20,0:20:42.14:0,42,1397	1/1:20,0:32:64.48:2820,64,0	1/1:15,10:30:66.23:4596,66,0	1/1:14,4:20:39.13:1568,39,0	1/1:34,0:34:84.27:4500,84,0	1/1:7,11:21:54.14:3697,54,0	0/0:28,0:28:78.25:0,78,3308	0/0:22,0:22:60.18:0,60,2461	0/0:27,0:27:78.27:0,78,3476	0/0:32,0:32:90.31:0,90,3615	0/0:21,0:21:57.20:0,57,2545	1/1:16,0:31:84.25:5260,84,0	1/1:15,0:28:72.25:4464,72,0	1/1:12,6:20:51.18:3526,51,0	0/0:22,0:22:60.21:0,60,2646	1/1:6,3:11:27.09:1338,27,0	1/1:16,13:32:90.15:5382,90,0	1/1:9,0:9:6.02:268,6,0	0/0:22,0:22:50.86:0,51,2070	0/0:27,0:27:75.26:0,75,3441	0/0:8,0:8:21.07:0,21,931	1/1:16,7:27:54.10:3499,54,0	1/1:13,13:30:84.26:5843,84,0	1/1:16,18:35:99:6845,99,0	1/1:7,4:11:24.08:1745,24,0
chr10	7943372	.	AG	A	2282.87	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=9.985;DP=639;FS=4.099;HRun=6;HaplotypeScore=60.1293;InbreedingCoeff=0.9996;MQ=88.75;MQ0=0;MQRankSum=-1.341;QD=25.65;ReadPosRankSum=2.450;VQSLOD=4.1174;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,99,1272	0/0:14,0:14:42.13:0,42,539	0/0:19,0:19:48.11:0,48,578	0/0:28,0:28:75.20:0,75,934	0/0:29,0:29:84.27:0,84,1104	0/0:24,0:24:72.23:0,72,941	0/0:19,0:19:57.15:0,57,731	0/0:35,0:35:96.30:0,96,1250	0/0:14,0:14:36.12:0,36,474	0/0:22,0:22:63.20:0,63,828	0/0:23,0:23:60.17:0,60,758	0/0:19,0:19:57.16:0,57,721	0/0:18,0:18:48.16:0,48,631	0/0:21,0:21:57.19:0,57,750	0/0:24,0:24:66.21:0,66,855	0/0:19,0:19:57.19:0,57,750	0/0:24,0:24:63.20:0,63,828	0/0:30,0:30:87.25:0,87,1123	0/0:20,0:20:54.16:0,54,696	0/0:31,0:31:87.28:0,87,1144	1/1:2,20:22:60.15:645,60,0	0/0:24,0:24:72.22:0,72,931	0/0:23,0:23:60.19:0,60,776	0/0:10,0:10:27.09:0,27,355	0/0:24,0:24:69.21:0,69,886	1/1:2,24:26:35.71:735,36,0	1/1:0,22:22:63.16:677,63,0	1/1:4,15:19:36.09:387,36,0
chr10	7944709	.	T	TCA	7452.45	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=1.631;DP=604;FS=0.000;HRun=0;HaplotypeScore=131.4260;InbreedingCoeff=0.9984;MQ=67.65;MQ0=0;MQRankSum=-0.915;QD=37.08;ReadPosRankSum=0.253;VQSLOD=6.5942;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:72.21:0,72,906	1/1:3,7:10:21.07:346,21,0	0/0:18,0:16:33.04:0,33,400	0/0:10,0:9:23.99:0,24,247	0/0:35,0:35:84.24:0,84,1051	1/1:5,27:33:69.24:1164,69,0	1/1:1,15:16:42.14:709,42,0	0/0:29,0:29:60.18:0,60,760	1/1:6,26:33:54.18:911,54,0	0/0:4,0:24:51.20:0,51,254	0/0:0,0:21:48.29:0,48,238	0/0:3,0:27:56.82:0,57,280	0/0:0,0:20:51.22:0,51,255	0/0:2,0:18:31.33:0,31,157	0/0:21,0:21:45.15:0,45,579	0/0:13,0:13:36.10:0,36,450	1/1:2,21:23:48.16:810,48,0	0/0:0,0:15:31.25:0,31,154	1/1:2,12:14:36.09:578,36,0	1/1:4,40:44:99:1822,108,0	0/0:20,0:20:54.16:0,54,679	0/0:2,0:14:34.09:0,34,168	0/0:3,0:16:28.41:0,28,140	0/0:0,0:13:28.41:0,28,140	1/1:1,27:28:66.23:1113,66,0	0/0:14,0:15:41.97:0,42,516	0/0:32,0:32:90.26:0,90,1127	0/0:14,0:14:42.14:0,42,540
chr10	7947237	.	GCCTTCA	G	321.88	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.762;DP=721;FS=1.622;HRun=0;HaplotypeScore=144.5244;InbreedingCoeff=0.9765;MQ=82.60;MQ0=0;MQRankSum=-4.187;QD=35.76;ReadPosRankSum=-1.962;VQSLOD=3.0264;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:72.17:0,72,2360	0/0:18,0:18:51.17:0,51,1757	0/0:30,0:30:78.10:0,78,2594	0/0:25,0:25:75.26:0,75,2438	0/0:28,0:28:84.29:0,84,2945	0/0:25,0:25:75.26:0,75,2635	0/0:15,0:15:45.15:0,45,1622	0/0:34,0:34:96.30:0,96,3240	0/0:33,0:33:93.32:0,93,3220	0/0:44,0:44:99:0,132,4540	0/0:29,0:29:87.23:0,87,2964	0/0:25,0:25:72.25:0,72,2535	0/0:32,0:32:87.30:0,87,3095	0/0:22,0:22:66.23:0,66,2378	0/0:24,0:24:69.24:0,69,2448	0/0:26,0:26:75.26:0,75,2641	0/0:27,0:27:75.26:0,75,2640	0/0:17,0:17:51.15:0,51,1751	0/0:21,0:21:63.20:0,63,2001	0/0:40,0:40:99:0,117,4207	1/1:1,8:8:18.06:412,18,0	0/0:25,0:25:72.14:0,72,2336	0/0:27,0:27:81.28:0,81,2866	0/0:26,0:26:75.26:0,75,2644	0/0:24,0:24:72.24:0,72,2392	0/0:29,0:29:81.26:0,81,2756	0/0:36,0:36:99:0,105,3590	0/0:5,0:5:15.05:0,15,541
chr10	7948069	.	G	GT	4523.80	PASS	AB=0.769;AC=32;AF=0.571;AN=56;BaseQRankSum=-2.974;DP=528;FS=24.749;HRun=12;HaplotypeScore=62.6031;InbreedingCoeff=0.4790;MQ=61.29;MQ0=11;MQRankSum=-3.273;QD=12.74;ReadPosRankSum=-0.738;VQSLOD=2.5919;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:42:84:0,84,616	0/0:14,0:13:26.83:0,27,197	0/1:12,0:11:4.05:4,0,48	0/0:6,0:5:2.97:0,3,22	1/1:5,13:19:26.10:301,26,0	0/0:22,0:19:44.72:0,45,328	0/0:25,2:27:4.21:0,4,357	1/1:10,18:29:40.91:515,41,0	0/1:10,1:10:5.32:5,0,129	1/1:12,16:27:44.92:401,45,0	0/1:7,5:10:4.03:99,0,4	1/1:7,9:13:24.04:234,24,0	1/1:3,12:16:38.85:354,39,0	1/1:5,9:14:26.95:239,27,0	0/1:6,3:9:9.88:76,0,10	1/1:5,13:18:13.95:275,14,0	0/0:26,0:26:49.18:0,49,339	0/1:8,8:13:32.79:186,0,33	0/0:16,0:18:26.42:0,26,169	0/1:14,1:16:6.36:6,0,112	1/1:5,0:10:11.36:57,11,0	1/1:10,13:23:41.81:374,42,0	0/1:6,12:17:0.86:154,0,1	1/1:6,12:17:17.15:328,17,0	0/0:17,0:16:32.75:0,33,241	1/1:7,16:22:41.83:366,42,0	1/1:8,13:21:33.01:308,33,0	0/1:5,11:16:7.85:241,0,8
chr10	7948335	.	G	GGTGTGT	5256.99	PASS	AB=0.979;AC=29;AF=0.537;AN=54;BaseQRankSum=1.338;DP=683;FS=5.352;HRun=0;HaplotypeScore=182.7744;InbreedingCoeff=0.3067;MQ=62.48;MQ0=10;MQRankSum=-7.316;QD=11.45;ReadPosRankSum=-3.747;VQSLOD=3.1528;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:42,0:41:10.59:11,0,178	0/1:9,0:9:11.93:12,0,172	./.	0/1:21,0:13:0:0,0,0	1/1:8,11:19:4.03:130,4,0	0/0:15,0:15:30.96:0,31,523	0/0:21,0:31:42.29:0,42,625	1/1:40,0:40:5.75:223,6,0	0/0:17,0:16:19.27:0,19,261	1/1:29,0:31:18.31:506,18,0	0/1:16,0:16:24.63:131,0,25	1/1:27,0:28:20.39:325,20,0	0/1:19,0:20:45.90:213,0,46	0/1:26,0:26:66.97:281,0,67	1/1:7,8:18:20.10:457,20,0	1/1:11,9:23:27.09:658,27,0	0/0:42,0:42:67.17:0,67,1192	0/1:26,0:25:27.75:430,0,28	0/0:17,0:16:4.69:0,5,65	0/0:21,0:22:6.47:0,6,459	0/0:21,0:42:19.20:0,19,486	1/1:14,0:14:15.05:409,15,0	0/1:20,0:20:85.67:109,0,86	0/1:31,0:38:99:166,0,119	0/0:15,0:17:36.50:0,37,604	1/1:13,7:25:32.08:483,32,0	1/1:18,3:24:26.14:480,26,0	1/1:8,6:15:9.03:233,9,0
chr10	7948364	.	G	GTGTGTGTA	4336.54	PASS	AB=0.956;AC=22;AF=0.393;AN=56;BaseQRankSum=2.872;DP=687;FS=4.077;HRun=0;HaplotypeScore=173.2513;InbreedingCoeff=0.3196;MQ=51.36;MQ0=14;MQRankSum=-5.826;QD=12.15;ReadPosRankSum=3.208;VQSLOD=3.9181;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:39:15.05:0,15,280	0/0:6,0:6:12.02:0,12,260	0/0:18,0:2:2.97:0,3,20	0/0:27,0:5:1.84:0,2,30	0/1:22,0:21:27.55:28,0,85	0/0:19,0:19:44.41:0,44,670	0/0:32,0:32:61.78:0,62,936	0/0:25,0:25:5.74:0,6,181	0/0:19,0:18:38:0,38,450	1/1:21,0:21:24.84:341,25,0	1/1:20,0:19:26.92:381,27,0	1/1:8,16:33:11.53:504,12,0	1/1:9,12:24:9.03:230,9,0	1/1:12,3:29:24.04:509,24,0	0/1:23,0:23:99:186,0,129	0/1:25,0:25:99:185,0,151	0/0:43,0:43:59.07:0,59,1575	0/1:9,7:20:21.33:426,0,21	0/0:12,0:12:20.93:0,21,237	0/0:26,0:26:48.03:0,48,706	0/0:44,0:44:77.94:0,78,1057	1/1:1,0:17:14.92:313,15,0	1/1:14,2:22:20.66:433,21,0	0/1:43,0:42:14.90:362,0,15	0/0:18,0:18:42.11:0,42,843	0/1:22,0:22:99:180,0,100	0/1:22,0:22:99:155,0,110	0/1:13,0:12:18.13:104,0,18
chr10	7948368	.	GTGTA	G	572.47	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=2.142;DP=682;FS=25.575;HRun=0;HaplotypeScore=146.2260;InbreedingCoeff=0.2704;MQ=54.20;MQ0=12;MQRankSum=-1.486;QD=4.09;ReadPosRankSum=-1.473;VQSLOD=0.9289;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:5,33:37:21.96:359,22,0	0/0:7,0:7:15.50:0,15,292	0/0:19,0:2:2.99:0,3,25	0/0:29,0:7:7.97:0,8,48	0/0:23,0:22:27.81:0,28,251	0/0:21,0:21:57.04:0,57,955	0/0:35,0:35:45.92:0,46,890	0/1:27,0:27:30.53:31,0,369	0/0:18,0:18:44.94:0,45,616	0/0:22,0:22:30.31:0,30,729	0/0:21,0:20:11.62:0,12,410	0/1:31,0:31:9.93:10,0,299	0/0:25,0:25:23.33:0,23,258	0/0:31,0:30:32.85:0,33,523	0/0:20,0:20:39:0,39,407	0/0:23,1:24:46.87:0,47,580	0/0:41,0:41:99:0,108,1968	0/0:20,0:20:4.30:0,4,375	0/0:9,0:9:23.01:0,23,246	0/0:22,0:22:55.84:0,56,913	0/1:44,0:44:99:293,0,253	0/0:17,0:17:30.63:0,31,289	0/0:20,0:20:26.82:0,27,491	0/0:43,0:42:44.79:0,45,551	0/0:18,0:18:37.68:0,38,680	0/0:22,0:22:41.37:0,41,665	0/0:21,0:21:30.30:0,30,415	0/0:14,0:13:20.69:0,21,245
chr10	7948370	.	GTA	G	367.94	PASS	AB=0.982;AC=11;AF=0.196;AN=56;BaseQRankSum=6.293;DP=690;FS=10.992;HRun=0;HaplotypeScore=130.9440;InbreedingCoeff=-0.0293;MQ=54.44;MQ0=12;MQRankSum=-3.733;QD=1.63;ReadPosRankSum=-1.173;VQSLOD=1.3595;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:38,0:37:17.51:149,18,0	0/1:7,0:7:5.94:6,0,202	0/0:19,0:2:2.99:0,3,25	0/0:27,0:7:7.97:0,8,48	0/0:24,0:23:10.46:0,10,164	0/0:21,0:21:57.02:0,57,707	0/0:35,0:35:34.04:0,34,629	0/1:29,2:31:99:117,0,427	0/0:19,0:19:36.30:0,36,459	0/0:19,0:20:32.71:0,33,476	0/0:22,0:21:5.51:0,6,288	0/1:32,0:32:30.67:31,0,155	0/0:25,0:25:19.51:0,20,145	0/0:31,0:30:23.58:0,24,386	0/1:19,1:20:4.19:4,0,273	0/0:25,0:25:35.14:0,35,385	0/0:40,0:40:99:0,108,1440	0/1:18,0:18:14.70:15,0,236	0/0:9,0:9:15.32:0,15,193	0/0:24,0:24:27.41:0,27,654	0/0:44,0:44:19.20:0,19,361	0/1:18,0:18:6.99:7,0,132	0/0:19,0:19:14.72:0,15,372	0/0:45,0:44:43.37:0,43,522	0/1:18,1:19:68.09:68,0,417	0/1:22,0:22:30.31:30,0,355	0/1:21,0:21:86.80:87,0,271	0/0:14,0:13:20.73:0,21,164
chr10	7949085	.	TC	T	6908.62	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=12.063;DP=576;FS=1.459;HRun=2;HaplotypeScore=72.3104;InbreedingCoeff=0.9880;MQ=81.54;MQ0=0;MQRankSum=0.031;QD=32.74;ReadPosRankSum=5.125;VQSLOD=4.6759;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,23:23:60.19:772,60,0	0/0:7,0:7:21.07:0,21,313	0/0:24,1:22:16.42:0,16,400	0/0:27,0:23:21:0,21,374	0/0:28,0:28:84.26:0,84,1206	0/0:16,0:16:44.57:0,45,669	0/0:9,0:9:24.93:0,25,318	0/0:36,0:36:99:0,105,1373	0/0:16,0:16:45.13:0,45,630	1/1:2,20:22:66.15:794,66,0	1/1:1,24:25:72.12:876,72,0	1/1:0,17:17:48.15:620,48,0	1/1:0,18:18:45.15:581,45,0	1/1:4,19:23:59.19:777,59,0	0/0:12,0:12:36.07:0,36,493	0/0:22,0:22:59.60:0,60,851	0/0:20,0:20:60.18:0,60,852	1/1:3,10:13:27.09:348,27,0	0/0:28,0:28:78.68:0,79,1044	0/0:24,0:24:67.73:0,68,926	0/0:12,0:12:33.06:0,33,447	1/1:1,17:18:48.07:583,48,0	1/1:1,34:35:78.23:987,78,0	1/1:3,14:17:48.09:571,48,0	0/0:19,0:19:57.17:0,57,814	0/0:23,0:23:63.17:0,63,882	0/0:37,0:36:99:0,111,1529	0/0:3,0:3:9.03:0,9,134
chr10	7949086	.	CCT	C	1217.59	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=16.479;DP=568;FS=1.456;HRun=0;HaplotypeScore=101.1423;InbreedingCoeff=0.9877;MQ=81.83;MQ0=0;MQRankSum=-0.252;QD=5.85;ReadPosRankSum=5.712;VQSLOD=2.7493;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:23:40.30:110,40,0	0/0:7,0:7:21.07:0,21,424	0/0:26,0:22:18.82:0,19,575	0/0:27,0:23:25.85:0,26,511	0/0:28,0:28:84.28:0,84,1649	0/0:16,0:16:48.11:0,48,926	0/0:9,0:9:27:0,27,431	0/0:36,0:36:99:0,108,1845	0/0:15,0:15:45.13:0,45,835	1/1:20,2:22:48.46:249,48,0	1/1:25,1:26:39.34:173,39,0	1/1:17,0:17:31.90:88,32,0	1/1:18,0:18:30.30:84,30,0	1/1:21,1:22:26.60:158,27,0	0/0:12,0:12:36.08:0,36,652	0/0:21,0:21:63.14:0,63,1155	0/0:21,0:21:63.18:0,63,1163	1/1:10,0:10:17.67:49,18,0	0/0:27,0:27:81.19:0,81,1435	0/0:23,0:23:69.18:0,69,1277	0/0:12,0:12:36.12:0,36,686	1/1:17,1:18:30.33:125,30,0	1/1:34,1:35:52.52:184,53,0	1/1:14,3:17:35.51:218,36,0	0/0:19,0:19:57.18:0,57,1097	0/0:21,0:21:63.17:0,63,1167	0/0:37,0:36:99:0,111,2140	0/0:3,0:3:9.03:0,9,182
chr10	7949438	.	GA	G	4969.72	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=14.226;DP=639;FS=1.443;HRun=9;HaplotypeScore=63.7879;InbreedingCoeff=0.9383;MQ=76.81;MQ0=0;MQRankSum=-1.800;QD=23.44;ReadPosRankSum=3.328;VQSLOD=5.7427;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,20:20:57.03:522,57,0	0/0:13,0:13:33.10:0,33,381	0/0:12,1:12:1.61:0,2,192	0/0:20,1:21:2.52:0,3,251	0/0:34,1:35:74.78:0,75,1076	0/0:33,0:33:84.21:0,84,955	0/0:23,0:23:63.18:0,63,717	0/0:30,0:30:78.21:0,78,884	0/0:18,0:18:54.14:0,54,611	1/1:3,22:25:63.03:576,63,0	1/1:2,26:28:72.03:659,72,0	1/1:1,26:27:72.04:659,72,0	1/1:1,22:23:63.03:577,63,0	1/1:1,22:23:54.03:494,54,0	0/0:29,0:29:81.22:0,81,922	0/0:24,0:25:63.02:0,63,707	0/0:14,0:14:36.11:0,36,415	1/1:0,9:9:21.01:192,21,0	0/0:22,0:22:57.17:0,57,655	0/0:40,0:40:99:0,111,1281	0/0:28,0:28:84.25:0,84,969	1/1:1,18:19:48.02:439,48,0	1/1:1,20:21:48.03:439,48,0	1/1:1,16:17:45.02:412,45,0	0/0:16,0:16:48.12:0,48,534	0/0:28,0:28:69.20:0,69,796	0/0:33,1:34:74.83:0,75,1103	0/0:5,0:5:15.04:0,15,173
chr10	7953059	.	CA	C	7736.89	PASS	AB=0.909;AC=19;AF=0.339;AN=56;BaseQRankSum=13.377;DP=721;FS=0.622;HRun=2;HaplotypeScore=77.0893;InbreedingCoeff=0.9200;MQ=73.22;MQ0=0;MQRankSum=-2.797;QD=31.32;ReadPosRankSum=3.448;VQSLOD=4.6075;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:90.28:0,90,1323	0/0:9,0:9:24.08:0,24,360	0/0:26,0:26:78.26:0,78,1152	0/0:36,0:36:96.06:0,96,1390	0/0:36,0:36:99:0,105,1531	0/0:19,0:19:57.11:0,57,807	0/0:24,0:24:72.24:0,72,1078	0/0:29,0:29:84.26:0,84,1204	0/0:25,0:25:75.25:0,75,1120	1/1:1,31:32:93.30:1207,93,0	1/1:0,20:20:51.17:662,51,0	1/1:0,25:25:69.22:896,69,0	1/1:0,20:20:57.07:699,57,0	1/1:0,20:20:57.19:740,57,0	0/0:26,0:26:75.24:0,75,1104	0/0:28,0:28:84.28:0,84,1259	0/0:36,0:36:99:0,105,1573	1/1:1,19:20:51.17:661,51,0	0/0:27,0:27:78.25:0,78,1147	0/0:32,0:32:96.32:0,96,1419	0/0:31,0:31:90.30:0,90,1343	1/1:0,26:26:78.25:1013,78,0	1/1:2,22:24:57.03:740,57,0	1/1:0,30:30:84.27:1091,84,0	0/0:21,0:21:63.20:0,63,925	0/1:27,3:30:29.59:30,0,1063	0/0:29,0:29:87.29:0,87,1302	0/0:10,0:10:30.09:0,30,430
chr10	7953403	.	GA	G	7283.33	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=9.392;DP=592;FS=5.709;HRun=11;HaplotypeScore=68.4272;InbreedingCoeff=0.9315;MQ=67.61;MQ0=0;MQRankSum=0.069;QD=17.85;ReadPosRankSum=2.501;VQSLOD=6.0896;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,21:26:15.93:337,16,0	0/0:10,0:10:30.08:0,30,320	0/0:11,0:11:21.01:0,21,209	0/0:9,0:9:6:0,6,55	1/1:9,23:32:59.88:493,60,0	0/0:20,1:21:29.47:0,29,505	0/0:16,1:20:4.87:0,5,407	1/1:6,17:26:3.48:352,3,0	0/0:15,0:15:36.93:0,37,365	1/1:9,23:32:68.87:563,69,0	1/1:1,23:24:65.91:542,66,0	1/1:0,13:13:32.96:271,33,0	1/1:2,23:25:53.94:443,54,0	1/1:3,14:18:43.97:351,44,0	1/1:5,19:24:53.93:443,54,0	1/1:2,16:18:18.96:362,19,0	0/0:18,0:18:45.08:0,45,463	1/1:4,9:13:17.96:148,18,0	0/0:20,0:22:47.34:0,47,424	0/0:30,2:32:43.71:0,44,737	1/1:2,24:26:59.89:487,60,0	1/1:4,21:25:56.91:468,57,0	1/1:5,21:26:53.91:443,54,0	1/1:2,20:22:53.92:443,54,0	0/0:25,0:25:38.70:0,39,592	1/1:2,24:26:71.89:589,72,0	1/1:2,23:25:41.26:449,41,0	1/1:2,5:7:11.98:98,12,0
chr10	7954197	.	TG	T	6881.62	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=16.217;DP=647;FS=4.841;HRun=2;HaplotypeScore=78.2981;InbreedingCoeff=0.9999;MQ=93.40;MQ0=0;MQRankSum=-4.050;QD=36.41;ReadPosRankSum=2.954;VQSLOD=5.6077;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,141,2070	0/0:11,0:11:30.06:0,30,424	0/0:32,0:32:90.19:0,90,1222	0/0:26,0:26:64.52:0,65,917	1/1:0,28:28:75.24:974,75,0	0/0:13,0:13:39.12:0,39,564	0/0:24,0:24:72.23:0,72,1058	1/1:1,23:24:69.21:883,69,0	0/0:21,0:21:63.21:0,63,944	0/0:24,0:24:69.23:0,69,1035	0/0:17,0:17:45.15:0,45,675	0/0:26,0:26:78.24:0,78,1132	0/0:19,0:19:54.18:0,54,809	0/0:22,0:22:66.22:0,66,975	1/1:0,24:24:66.21:857,66,0	1/1:0,20:20:54.17:701,54,0	0/0:29,0:29:84.26:0,84,1235	0/0:17,0:17:48.16:0,48,719	0/0:20,0:20:57.16:0,57,797	0/0:22,0:22:63.20:0,63,925	1/1:0,25:25:66.21:857,66,0	0/0:22,0:22:66.22:0,66,980	0/0:18,0:18:54.18:0,54,809	0/0:27,0:27:81.27:0,81,1214	0/0:21,0:21:63.21:0,63,943	1/1:0,25:25:75.24:974,75,0	1/1:0,31:31:90.29:1168,90,0	1/1:0,12:12:36.12:467,36,0
chr10	7956642	.	CT	C	6149.14	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=12.640;DP=650;FS=5.938;HRun=1;HaplotypeScore=62.8048;InbreedingCoeff=0.9996;MQ=59.03;MQ0=5;MQRankSum=2.221;QD=35.14;ReadPosRankSum=-0.268;VQSLOD=4.4783;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:93.25:0,93,1426	0/0:11,0:11:27.09:0,27,431	0/0:21,0:13:30.09:0,30,456	0/0:22,0:11:32.80:0,33,411	1/1:0,35:35:68.88:886,69,0	0/0:25,0:25:75.26:0,75,1196	0/0:25,0:25:75.24:0,75,1174	1/1:0,25:24:72.11:906,72,0	0/0:15,0:15:45.12:0,45,672	0/0:34,0:34:99:0,102,1612	0/0:34,0:34:66.22:0,66,1054	0/0:16,0:16:45.15:0,45,714	0/0:20,0:20:60.17:0,60,906	0/0:27,0:27:81.26:0,81,1271	1/1:0,20:20:57.19:796,57,0	1/1:0,20:20:51.17:712,51,0	0/0:13,0:13:36.12:0,36,575	0/0:26,0:26:69.19:0,69,1065	0/0:18,0:17:48.16:0,48,746	0/0:29,0:29:84.27:0,84,1319	1/1:0,13:13:36.12:503,36,0	0/0:21,0:21:63.21:0,63,1000	0/0:29,0:28:78.27:0,78,1246	0/0:17,0:17:48.16:0,48,767	0/0:40,0:40:90.30:0,90,1415	1/1:0,22:22:66.20:903,66,0	1/1:0,21:21:60.16:815,60,0	1/1:0,19:19:45.15:628,45,0
chr10	7957313	.	CCAGGTG	C	10984.26	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=8.254;DP=724;FS=11.104;HRun=0;HaplotypeScore=166.2382;InbreedingCoeff=0.8820;MQ=49.94;MQ0=14;MQRankSum=-17.236;QD=43.25;ReadPosRankSum=-0.705;VQSLOD=3.9213;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:16,34:49:90.31:2041,90,0	0/0:9,0:9:24.08:0,24,750	0/0:19,0:2:3.01:0,3,106	0/1:20,0:8:8.96:9,0,390	0/0:24,0:24:66.23:0,66,2165	0/0:27,0:27:78.27:0,78,2566	0/0:33,0:33:93.32:0,93,3141	0/0:30,0:26:66.21:0,66,1799	0/0:26,0:26:78.27:0,78,2699	1/1:3,20:23:60.14:1265,60,0	1/1:0,7:6:6.02:124,6,0	1/1:4,24:28:66.23:1522,66,0	1/1:4,24:28:72.25:1672,72,0	1/1:1,22:23:66.23:1519,66,0	0/0:38,0:38:99:0,108,3733	0/0:33,0:33:93.32:0,93,3175	0/0:43,0:43:99:0,123,4252	1/1:5,16:21:36.12:837,36,0	0/0:29,0:25:63.22:0,63,2087	0/0:19,0:19:48.15:0,48,1554	0/0:56,0:55:99:0,144,4674	1/1:1,17:18:45.15:970,45,0	1/1:0,16:15:27.09:627,27,0	1/1:2,18:20:18.21:400,18,0	0/0:26,0:26:54.19:0,54,1717	0/0:21,0:21:57.18:0,57,1889	0/0:34,0:34:99:0,99,3338	0/0:3,0:3:9.03:0,9,256
chr10	7958303	.	G	GT	4893.37	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-13.666;DP=741;FS=0.694;HRun=9;HaplotypeScore=74.0457;InbreedingCoeff=0.9777;MQ=84.95;MQ0=0;MQRankSum=-1.678;QD=22.87;ReadPosRankSum=-1.893;VQSLOD=4.8925;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,123,1061	0/0:16,0:16:44.95:0,45,383	0/0:24,0:24:53.75:0,54,451	0/0:24,0:25:44.81:0,45,384	1/1:7,27:34:82.42:883,82,0	0/0:35,0:35:98.96:0,99,855	0/0:19,0:19:47.97:0,48,417	1/1:8,27:35:81.14:863,81,0	0/0:31,0:31:74.96:0,75,648	0/0:38,0:38:99:0,108,936	0/0:27,0:28:70.98:0,71,598	0/0:18,0:18:38.96:0,39,339	0/0:30,0:30:83.97:0,84,728	0/0:23,0:23:62.97:0,63,543	1/1:4,23:28:28.09:539,28,0	1/1:4,23:28:69.02:743,69,0	0/0:20,0:20:50.99:0,51,442	0/0:9,0:9:20.58:0,21,182	0/0:23,0:23:65.96:0,66,568	0/0:34,0:34:51.18:0,51,661	1/1:5,18:24:44.87:462,45,0	0/0:25,0:25:65.96:0,66,573	0/0:29,0:30:77:0,77,657	0/0:27,0:27:71.78:0,72,617	0/0:23,0:23:53.96:0,54,465	1/1:5,21:26:37.09:626,37,0	1/1:7,24:31:5.04:512,5,0	1/1:0,8:8:24.06:265,24,0
chr10	7958799	.	G	GATATATATAT	3951.67	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=0.631;DP=363;FS=14.961;HRun=0;HaplotypeScore=112.6473;InbreedingCoeff=0.8165;MQ=70.84;MQ0=0;MQRankSum=-4.556;QD=38.00;ReadPosRankSum=-4.947;VQSLOD=0.6814;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:54.19:0,54,1580	0/0:8,0:8:15.05:0,15,425	0/0:13,0:12:13.85:0,14,198	0/0:15,0:14:2.80:0,3,374	1/1:6,2:8:12.02:249,12,0	0/1:19,0:19:1.42:1,0,1190	0/0:9,0:9:18.04:0,18,427	1/1:36,0:36:72.11:1695,72,0	0/0:14,0:14:39.11:0,39,1065	0/0:15,0:15:21.17:0,21,1221	0/0:18,0:18:51.15:0,51,1352	0/0:9,0:9:21.06:0,21,545	0/0:14,0:14:30.08:0,30,762	0/0:16,0:16:33.10:0,33,949	1/1:5,2:7:12.02:357,12,0	1/1:5,2:7:12.04:388,12,0	0/0:15,0:15:42.10:0,42,1130	0/0:5,0:5:2.68:0,3,272	0/0:18,0:18:36.07:0,36,885	0/0:17,0:17:36.12:0,36,1102	1/1:1,0:3:6.02:139,6,0	0/0:4,0:4:6.02:0,6,187	0/0:12,0:12:33.10:0,33,875	0/0:8,0:8:18.01:0,18,403	0/0:22,0:22:60.17:0,60,1719	1/1:3,2:5:12.04:523,12,0	1/1:7,2:9:14.90:391,15,0	1/1:10,0:10:9.03:209,9,0
chr10	7958844	.	AATAT	A	3741	PASS	AC=18;AF=0.333;AN=54;BaseQRankSum=10.711;DP=324;FS=8.843;HRun=0;HaplotypeScore=56.8094;InbreedingCoeff=0.8778;MQ=69.23;MQ0=1;MQRankSum=-1.951;QD=35.63;ReadPosRankSum=-1.618;VQSLOD=2.3200;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,20:22:45.15:773,45,0	0/0:8,0:10:29.89:0,30,671	1/1:12,0:6:0.88:2,1,0	0/0:22,0:13:0.72:0,1,52	1/1:0,8:8:24.04:380,24,0	0/0:24,0:24:69.20:0,69,1557	0/0:6,0:6:12.04:0,12,302	1/1:7,23:31:66.18:1024,66,0	0/0:11,0:11:21.07:0,21,528	0/0:14,0:14:33.11:0,33,809	0/0:12,0:12:33.10:0,33,779	0/0:10,0:10:24.08:0,24,604	0/0:6,0:6:15.05:0,15,369	0/0:10,0:10:30.10:0,30,755	1/1:0,7:7:21.07:360,21,0	1/1:0,3:3:6.02:103,6,0	0/0:16,0:16:45.15:0,45,1122	0/0:9,0:9:24.08:0,24,577	0/0:12,0:12:24.08:0,24,581	0/0:20,0:20:51.18:0,51,1278	./.	0/0:5,0:5:12.04:0,12,302	0/0:5,0:5:9.03:0,9,227	0/0:4,0:4:9.03:0,9,227	0/0:20,0:21:56.97:0,57,1322	1/1:0,10:10:30.08:482,30,0	1/1:0,8:8:24.08:411,24,0	1/1:0,4:4:12.04:206,12,0
chr10	7960725	.	A	AACAT	19158.39	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=16.448;DP=523;FS=2.504;HRun=0;HaplotypeScore=198.8012;InbreedingCoeff=0.9576;MQ=63.54;MQ0=0;MQRankSum=-16.746;QD=55.69;ReadPosRankSum=3.419;VQSLOD=5.6899;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,8:10:23.47:441,23,0	0/0:12,0:12:36.12:0,36,715	0/0:15,0:15:32.48:0,32,426	0/0:6,0:6:3.53:0,4,116	1/1:8,11:19:36.12:712,36,0	0/0:24,0:24:69.22:0,69,1342	0/0:17,0:17:48.16:0,48,913	1/1:13,16:29:87.28:1894,87,0	0/0:23,0:23:69.24:0,69,1367	1/1:12,14:26:75.18:1688,75,0	1/1:4,8:12:26.89:592,27,0	1/1:6,22:28:78.24:1639,78,0	1/1:14,22:36:93.04:2080,93,0	1/1:5,15:22:57.20:1238,57,0	1/1:2,23:25:72.02:1614,72,0	1/1:3,21:24:72.25:1621,72,0	0/0:25,0:25:66.23:0,66,1315	1/1:1,3:4:9.03:204,9,0	0/0:17,0:17:51.15:0,51,949	0/0:26,0:26:75.25:0,75,1452	1/1:5,3:8:15.05:313,15,0	1/1:6,6:12:18.76:453,19,0	1/1:4,15:19:46.52:1035,47,0	1/1:4,3:7:12.04:248,12,0	0/0:14,0:14:42.14:0,42,839	1/1:10,17:27:64.80:1429,65,0	1/1:12,16:28:71.84:1554,72,0	1/1:3,5:8:18.06:403,18,0
chr10	7960727	.	G	GAGATGTT	33462.22	PASS	AB=1.000;AC=37;AF=0.661;AN=56;BaseQRankSum=15.728;DP=539;FS=0.340;HRun=0;HaplotypeScore=190.7928;InbreedingCoeff=0.9188;MQ=59.81;MQ0=0;MQRankSum=-15.855;QD=90.68;ReadPosRankSum=1.525;VQSLOD=5.2727;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,8:13:35.99:959,36,0	0/0:12,0:12:36.12:0,36,987	0/0:13,0:13:18.62:0,19,398	0/1:5,0:5:12.20:12,0,158	1/1:12,11:23:53.08:1425,53,0	0/0:22,0:22:66.23:0,66,1845	0/0:17,0:17:51.18:0,51,1371	1/1:19,16:35:99:3327,105,0	0/0:23,0:23:69.24:0,69,1900	1/1:13,14:27:81.27:2870,81,0	1/1:4,7:14:38.96:1044,39,0	1/1:5,21:27:78.27:2720,78,0	1/1:9,21:31:90.15:2808,90,0	1/1:5,17:22:63.17:2081,63,0	1/1:11,23:34:99:3452,102,0	1/1:2,20:23:69.24:2428,69,0	0/0:25,0:25:72.25:0,72,1872	1/1:3,3:6:15.02:461,15,0	0/0:16,0:16:48.16:0,48,1333	0/0:27,0:27:78.27:0,78,2108	1/1:4,3:7:17.98:407,18,0	1/1:4,6:10:30.06:883,30,0	1/1:4,15:20:60.16:1969,60,0	1/1:3,3:9:18.06:510,18,0	0/0:15,0:15:42.14:0,42,1167	1/1:7,17:28:81.26:2809,81,0	1/1:10,16:26:75.24:2452,75,0	1/1:4,5:9:27.09:844,27,0
chr10	7961515	.	GTA	G	967.99	PASS	AB=0.556;AC=15;AF=0.341;AN=44;BaseQRankSum=-7.423;DP=338;FS=0.000;HRun=0;HaplotypeScore=89.6494;InbreedingCoeff=0.5912;MQ=73.65;MQ0=2;MQRankSum=5.916;QD=11.66;ReadPosRankSum=3.477;VQSLOD=3.0700;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:8:9.02:0,9,89	1/1:4,1:6:8.86:85,9,0	0/0:21,0:8:5.75:0,6,44	0/0:43,0:21:11.20:0,11,135	0/0:12,0:12:0.47:0,0,1	0/1:2,7:10:25.59:170,0,26	./.	0/0:53,0:52:98.56:0,99,719	1/1:3,3:6:9.03:106,9,0	1/1:4,0:4:1.25:3,1,0	./.	./.	0/0:3,0:4:5.98:0,6,47	0/0:1,0:3:3:0,3,26	0/0:11,0:11:5.73:0,6,35	0/0:5,0:5:2.74:0,3,12	1/1:5,5:10:9.02:106,9,0	0/0:4,0:4:2.96:0,3,19	1/1:13,6:22:29.36:255,29,0	1/1:9,2:11:6.02:71,6,0	0/0:6,0:6:5.73:0,6,35	./.	./.	./.	1/1:2,9:14:32.59:325,33,0	0/0:21,0:21:24.74:0,25,241	0/0:18,0:18:29.69:0,30,232	0/0:23,0:23:20.54:0,21,139
chr10	7961527	.	A	ATG	1469.58	PASS	AB=0.837;AC=14;AF=0.280;AN=50;BaseQRankSum=1.737;DP=328;FS=14.216;HRun=0;HaplotypeScore=98.1687;InbreedingCoeff=0.0343;MQ=74.10;MQ0=5;MQRankSum=-4.131;QD=6.84;ReadPosRankSum=0.386;VQSLOD=2.4011;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:4.61:0,5,109	0/0:4,0:4:11.91:0,12,87	0/0:26,0:10:7.49:0,7,79	0/1:58,0:23:5.83:6,0,97	0/1:10,3:13:54.51:55,0,56	0/0:11,0:10:23.84:0,24,195	0/0:2,0:2:5.99:0,6,50	0/1:49,6:54:99:612,0,318	0/0:4,0:4:11.93:0,12,88	0/0:4,0:4:9.90:0,10,86	0/0:2,0:2:6:0,6,51	0/0:2,0:2:5.99:0,6,50	1/1:2,0:2:3.47:10,3,0	1/1:2,0:2:2.50:9,2,0	0/1:7,4:11:35:50,0,35	0/1:7,1:8:12.95:13,0,79	0/0:10,0:9:20.90:0,21,161	0/0:4,0:4:5.94:0,6,42	0/0:15,0:15:35.62:0,36,251	0/0:4,0:4:8.95:0,9,67	0/1:4,1:5:16.49:22,0,16	./.	./.	./.	0/0:15,0:15:41.70:0,42,305	0/1:14,6:20:63.95:217,0,64	1/1:7,9:16:19.10:359,19,0	0/1:17,8:25:30.97:262,0,31
chr10	7961538	.	T	TATAC	3566.41	PASS	AB=0.848;AC=21;AF=0.375;AN=56;BaseQRankSum=-0.294;DP=351;FS=0.541;HRun=0;HaplotypeScore=91.9590;InbreedingCoeff=0.6396;MQ=73.64;MQ0=5;MQRankSum=-4.119;QD=15.85;ReadPosRankSum=0.575;VQSLOD=2.7738;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:2,0:12:10.65:11,0,41	0/0:6,0:6:18.02:0,18,189	0/0:27,0:12:7.20:0,7,148	0/1:56,0:22:14.97:15,0,168	1/1:10,3:15:23.75:204,24,0	0/0:12,0:11:30.05:0,30,339	0/0:3,0:3:8.99:0,9,74	1/1:34,6:53:99:1272,104,0	0/0:7,0:7:14.77:0,15,151	0/0:3,0:3:6.01:0,6,56	0/0:4,0:4:11.99:0,12,100	0/0:3,0:3:8.99:0,9,74	1/1:2,0:2:6.01:59,6,0	0/1:4,0:4:25.54:26,0,35	1/1:8,3:12:17.97:151,18,0	1/1:8,1:9:17.97:148,18,0	0/0:9,0:8:21:0,21,211	0/0:5,0:5:8.44:0,8,71	0/0:15,0:15:38.94:0,39,410	0/0:8,0:8:17.97:0,18,169	1/1:5,1:6:8.98:72,9,0	0/0:3,0:2:6:0,6,51	0/0:2,0:2:5.99:0,6,50	0/0:2,0:2:2.99:0,3,24	0/0:17,0:17:47.97:0,48,534	1/1:8,6:21:26.23:702,26,0	1/1:8,9:17:37.26:606,37,0	1/1:9,8:17:21.01:301,21,0
chr10	7962007	.	ACCCACCACCTGT	A	5197.92	PASS	AB=1.000;AC=46;AF=0.852;AN=54;BaseQRankSum=-8.138;DP=134;FS=12.143;HRun=0;HaplotypeScore=104.4416;InbreedingCoeff=-0.1207;MQ=56.22;MQ0=0;MQRankSum=2.072;QD=39.98;ReadPosRankSum=0.516;VQSLOD=3.5240;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:6,0:6:9.17:161,0,9	1/1:4,0:4:2.91:132,3,0	1/1:4,0:3:3.01:43,3,0	./.	1/1:9,0:9:3.70:296,4,0	1/1:6,1:7:11.14:437,11,0	1/1:3,0:3:7.84:154,8,0	1/1:1,0:1:3.01:78,3,0	0/0:2,0:2:5.44:0,5,24	0/1:6,0:6:6.66:254,0,7	0/1:6,0:6:22.07:210,0,22	1/1:3,0:3:2.41:135,2,0	0/1:8,0:8:15.86:337,0,16	1/1:4,1:5:1.26:288,1,0	1/1:4,0:4:12.04:268,12,0	1/1:3,0:3:9.03:235,9,0	1/1:5,0:5:9.38:296,9,0	1/1:1,0:1:2.97:20,3,0	1/1:4,0:3:6.01:75,6,0	1/1:0,5:5:3.01:95,3,0	1/1:2,0:2:3.01:80,3,0	0/1:9,0:9:6.09:217,0,6	1/1:3,0:3:4.76:162,5,0	1/1:7,0:7:10.73:277,11,0	0/1:10,0:10:19.59:292,0,20	1/1:10,0:10:8.81:428,9,0	1/1:3,0:3:9.03:188,9,0	1/1:2,0:2:0.66:40,1,0
chr10	7962026	.	ACGT	A	344.38	PASS	AB=0.937;AC=15;AF=0.288;AN=52;BaseQRankSum=-7.146;DP=158;FS=0.934;HRun=0;HaplotypeScore=112.0077;InbreedingCoeff=-0.3093;MQ=49.60;MQ0=0;MQRankSum=-1.035;QD=3.63;ReadPosRankSum=-6.448;VQSLOD=-0.0966;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:9,1:10:38.14:48,0,38	0/0:4,0:4:10.76:0,11,87	0/1:3,0:2:4.95:15,0,5	0/1:4,0:4:9.23:33,0,9	0/0:7,0:7:5.71:0,6,55	0/1:8,0:8:17.36:17,0,52	0/1:7,2:9:27.92:111,0,28	./.	0/1:5,1:6:42.88:55,0,43	0/1:7,1:8:42.83:43,0,98	0/0:7,0:7:9.09:0,9,89	0/0:2,1:3:4.20:0,4,22	0/0:7,0:7:10.94:0,11,84	0/1:6,0:6:2.33:2,0,46	0/1:2,1:3:11.59:12,0,12	0/1:5,0:5:18.61:19,0,29	0/1:7,0:7:11.98:49,0,12	./.	0/0:3,0:2:5.94:0,6,41	0/0:4,0:4:0.47:0,0,1	0/1:3,0:3:0:1,0,0	0/1:12,0:12:46.54:47,0,83	0/0:2,0:2:3.89:0,4,29	0/1:7,0:7:19.92:20,0,72	0/0:10,0:10:12.16:0,12,184	0/0:11,0:11:25.98:0,26,162	0/0:4,0:4:5.87:0,6,44	0/1:3,0:3:9.02:9,0,36
chr10	7962059	.	GGGA	G	156.79	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=1.772;DP=361;FS=3.606;HRun=0;HaplotypeScore=101.5504;InbreedingCoeff=0.6325;MQ=65.25;MQ0=2;MQRankSum=-1.853;QD=8.71;ReadPosRankSum=0.354;VQSLOD=3.0750;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,9:18:18.05:247,18,0	0/0:4,0:4:3.01:0,3,62	0/0:24,0:12:16.60:0,17,271	0/0:15,0:11:17.41:0,17,258	0/0:12,0:12:21.06:0,21,391	0/0:15,0:15:30.10:0,30,615	0/0:16,0:16:42.09:0,42,820	0/0:31,0:29:51.17:0,51,953	0/0:7,0:7:18.02:0,18,308	0/0:20,0:20:48.12:0,48,875	0/0:11,0:11:15.05:0,15,294	0/0:10,0:10:24.08:0,24,493	0/0:10,0:10:18.06:0,18,373	0/0:5,0:5:11.93:0,12,185	0/0:10,0:10:24.08:0,24,491	0/0:10,0:10:30.10:0,30,614	0/0:14,0:13:36.12:0,36,705	0/0:7,0:7:15.05:0,15,311	0/0:15,0:14:39.08:0,39,654	0/0:6,0:6:12.04:0,12,225	0/0:12,0:12:12.04:0,12,249	0/0:15,0:14:21.06:0,21,362	0/0:9,0:9:15.52:0,16,281	0/0:13,0:13:27.07:0,27,519	0/0:19,0:19:45.12:0,45,790	0/0:21,0:21:45.08:0,45,817	0/0:9,0:9:24.08:0,24,483	0/0:2,0:2:3.01:0,3,62
chr10	7962119	.	GGTGTGTGTGT	G	120.02	PASS	AB=0.947;AC=9;AF=0.196;AN=46;BaseQRankSum=3.687;DP=423;FS=14.256;HRun=0;HaplotypeScore=123.7972;InbreedingCoeff=0.4306;MQ=66.92;MQ0=20;MQRankSum=-2.435;QD=1.82;ReadPosRankSum=1.143;VQSLOD=1.6018;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:24:15.03:0,15,218	0/0:5,0:5:6.01:0,6,116	./.	./.	0/0:17,0:17:6.02:0,6,78	0/0:10,0:14:15.05:0,15,422	0/0:13,0:13:6.02:0,6,158	0/0:11,0:11:2.98:0,3,22	0/0:9,0:8:6.02:0,6,158	0/0:21,0:20:11.41:0,11,67	1/1:9,0:8:2.98:22,3,0	./.	0/0:16,0:15:6:0,6,66	0/0:10,0:10:3.01:0,3,43	0/1:17,0:18:12.05:24,0,12	./.	0/0:20,0:20:33.91:0,34,740	0/0:13,0:12:2.49:0,2,6	0/0:18,0:16:12.04:0,12,325	0/0:12,0:11:12.04:0,12,336	0/0:19,0:17:0:0,0,0	1/1:11,6:16:3:89,3,0	0/0:11,2:14:5.95:0,6,43	1/1:16,0:16:2.98:23,3,0	0/0:18,0:18:27.09:0,27,687	0/0:19,0:19:6.02:0,6,85	./.	1/1:3,0:6:9:84,9,0
chr10	7963305	.	C	CTA	12765.22	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-15.531;DP=640;FS=0.000;HRun=0;HaplotypeScore=70.9273;InbreedingCoeff=0.9998;MQ=86.15;MQ0=0;MQRankSum=-1.621;QD=53.41;ReadPosRankSum=1.164;VQSLOD=5.1222;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,29:31:87.03:1718,87,0	0/0:10,0:10:30.10:0,30,489	0/0:16,0:16:39.13:0,39,613	0/0:26,0:26:56.21:0,56,829	1/1:1,24:26:69.17:1350,69,0	0/0:21,0:21:60.20:0,60,972	0/0:16,0:16:45.11:0,45,703	1/1:2,35:39:99:2193,117,0	0/0:19,0:19:57.18:0,57,905	0/0:38,0:38:99:0,111,1790	0/0:21,0:21:60.19:0,60,950	0/0:13,0:13:36.10:0,36,562	0/0:36,0:36:99:0,108,1755	0/0:27,0:27:81.21:0,81,1266	1/1:0,14:15:36.12:731,36,0	1/1:0,22:22:63.22:1280,63,0	0/0:25,0:25:75.26:0,75,1223	0/0:14,0:14:36.11:0,36,559	0/0:21,0:21:60.17:0,60,889	0/0:20,0:20:60.20:0,60,978	1/1:0,23:23:60.21:1219,60,0	0/0:21,0:21:60.17:0,60,924	0/0:15,0:15:45.11:0,45,683	0/0:23,0:23:69.24:0,69,1125	0/0:19,0:19:57.16:0,57,881	1/1:0,31:31:93.23:1837,93,0	1/1:0,31:33:81.28:1645,81,0	1/1:6,13:19:39.13:792,39,0
chr10	7963961	.	AAAAC	A	11648.06	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=9.874;DP=654;FS=2.825;HRun=0;HaplotypeScore=115.3116;InbreedingCoeff=0.9439;MQ=73.33;MQ0=7;MQRankSum=0.498;QD=29.05;ReadPosRankSum=3.822;VQSLOD=4.8366;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:28:50.96:0,51,871	0/0:15,0:15:30.09:0,30,657	0/0:31,0:23:21.04:0,21,416	0/0:25,0:22:24.38:0,24,467	1/1:11,18:29:48.16:755,48,0	0/0:22,0:22:57.20:0,57,1351	0/0:22,0:22:37.37:0,37,872	1/1:12,15:27:42.05:526,42,0	0/0:10,0:10:24.08:0,24,587	1/1:10,19:28:54.18:827,54,0	1/1:8,20:28:54.18:842,54,0	1/1:3,18:21:45.15:740,45,0	1/1:5,17:22:42.06:690,42,0	1/1:6,20:26:60.20:975,60,0	1/1:5,15:20:36.12:592,36,0	1/1:10,19:28:33.11:543,33,0	0/0:22,0:22:45.13:0,45,1010	1/1:4,16:20:3.05:371,3,0	0/0:21,0:21:36.12:0,36,879	0/0:27,0:27:2.04:0,2,1087	1/1:9,19:28:44.27:716,44,0	1/1:2,13:15:39.13:583,39,0	1/1:7,16:23:42.14:690,42,0	1/1:3,18:20:42.14:690,42,0	0/0:29,0:29:54.16:0,54,1169	1/1:8,16:24:51.17:826,51,0	1/1:5,23:27:60.02:986,60,0	1/1:4,7:11:18.06:296,18,0
chr10	7964089	.	T	TA	3964.52	PASS	AB=0.806;AC=35;AF=0.625;AN=56;BaseQRankSum=1.049;DP=564;FS=1.268;HRun=13;HaplotypeScore=80.6227;InbreedingCoeff=0.5809;MQ=76.50;MQ0=5;MQRankSum=-0.270;QD=10.22;ReadPosRankSum=-0.320;VQSLOD=3.1355;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:16,0:18:1.95:2,0,187	0/1:7,1:8:13.02:13,0,65	0/0:26,0:18:6.72:0,7,79	0/1:26,0:20:10.53:11,0,101	0/1:11,17:29:11.05:291,0,11	0/0:15,0:15:36.56:0,37,248	0/0:15,2:17:8:0,8,198	1/1:18,4:40:54.57:299,55,0	0/0:17,0:17:43.15:0,43,280	1/1:15,12:27:44.88:401,45,0	1/1:6,10:16:9.35:214,9,0	1/1:4,9:14:2:159,2,0	1/1:3,17:21:35.78:309,36,0	1/1:7,7:15:14.66:252,15,0	1/1:5,3:18:23.21:156,23,0	1/1:2,2:17:22.87:127,23,0	0/0:24,1:28:46.19:0,46,437	1/1:4,9:13:0.44:147,0,0	0/0:15,0:15:20.48:0,20,135	0/0:22,0:22:62.07:0,62,411	1/1:3,9:13:20.86:182,21,0	1/1:5,10:15:9.44:226,9,0	0/1:6,16:22:4.66:242,0,5	1/1:1,15:18:41.59:350,42,0	0/0:33,1:35:45.86:0,46,437	1/1:5,1:20:38.72:242,39,0	1/1:6,1:22:34.25:186,34,0	1/1:2,1:15:28.57:157,29,0
chr10	7967309	.	T	TGA	9518.35	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-11.724;DP=540;FS=6.696;HRun=0;HaplotypeScore=63.7986;InbreedingCoeff=0.9944;MQ=78.71;MQ0=1;MQRankSum=-3.522;QD=44.90;ReadPosRankSum=-1.445;VQSLOD=5.3370;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,41:45:99:2050,117,0	0/0:6,0:6:15.05:0,15,203	0/0:21,0:21:53.58:0,54,675	0/0:14,0:14:30.07:0,30,385	1/1:1,15:15:39:683,39,0	0/0:23,0:23:60.20:0,60,812	0/0:23,0:23:60.15:0,60,775	1/1:8,26:34:81.28:1420,81,0	0/0:21,0:21:54.18:0,54,730	0/0:14,0:14:39.11:0,39,511	0/0:8,0:8:15.05:0,15,203	0/0:26,0:26:69.21:0,69,917	0/0:17,0:17:48.16:0,48,647	0/0:11,0:11:27.09:0,27,365	1/1:0,25:24:60.21:1052,60,0	1/1:4,24:28:72.25:1262,72,0	0/0:16,0:16:45.15:0,45,609	0/0:18,0:18:42.14:0,42,568	0/0:17,0:17:48.16:0,48,647	0/0:16,0:16:42.14:0,42,568	1/1:2,11:13:27.09:473,27,0	0/0:11,0:11:30.10:0,30,406	0/0:13,0:13:30.10:0,30,404	0/0:36,0:36:90.30:0,90,1218	0/0:17,0:17:48.16:0,48,649	1/1:0,18:18:54.18:946,54,0	1/1:2,19:21:60.17:1001,60,0	1/1:0,12:12:36.12:630,36,0
chr10	7967379	.	CT	C	2038.88	PASS	AB=0.668;AC=19;AF=0.339;AN=56;BaseQRankSum=4.486;DP=468;FS=0.000;HRun=13;HaplotypeScore=66.1040;InbreedingCoeff=0.6684;MQ=73.26;MQ0=0;MQRankSum=0.127;QD=10.73;ReadPosRankSum=4.798;VQSLOD=3.2162;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:13,21:34:57.25:496,57,0	0/0:4,0:4:8.95:0,9,77	0/0:15,0:13:4.21:0,4,104	0/0:12,1:13:16.44:0,16,92	0/0:21,1:22:19.97:0,20,328	0/0:10,1:12:6.22:0,6,200	0/0:14,0:15:35.80:0,36,318	0/0:25,0:25:62.93:0,63,564	0/0:22,1:23:26.15:0,26,403	1/1:6,13:19:32.71:241,33,0	1/1:3,9:12:21.33:154,21,0	1/1:7,13:20:10.45:197,10,0	1/1:3,8:12:28.86:203,29,0	1/1:5,13:19:5.29:230,5,0	0/0:22,0:22:27.22:0,27,382	0/0:15,0:15:26.01:0,26,239	0/0:16,2:19:4.03:0,4,330	1/1:7,9:17:19.90:137,20,0	0/1:12,2:15:13.96:14,0,181	0/0:17,0:17:35.53:0,36,321	0/0:16,0:16:20.12:0,20,310	0/1:3,10:13:18.67:145,0,19	0/1:2,8:10:31.49:126,0,31	1/1:5,13:19:43.46:295,43,0	0/0:16,0:16:41.01:0,41,365	0/0:15,0:15:30.03:0,30,283	0/0:21,0:21:42.03:0,42,392	0/0:6,0:7:14.86:0,15,131
chr10	7967448	.	A	AT	4431.28	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-9.426;DP=426;FS=12.127;HRun=8;HaplotypeScore=45.8254;InbreedingCoeff=0.9785;MQ=57.15;MQ0=5;MQRankSum=-0.289;QD=27.19;ReadPosRankSum=-1.119;VQSLOD=4.1783;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,18:22:29.74:577,30,0	0/0:3,0:3:9:0,9,82	0/0:7,0:6:15.01:0,15,137	0/0:11,0:10:11.98:0,12,106	1/1:4,17:21:51.15:589,51,0	0/0:9,0:9:21.01:0,21,192	0/0:18,1:19:13.45:0,13,377	1/1:6,12:17:36.09:405,36,0	0/0:13,0:13:27.01:0,27,247	0/0:24,0:24:51.01:0,51,464	0/0:13,0:13:39.01:0,39,352	0/0:16,0:16:33.02:0,33,301	0/0:15,0:15:38.05:0,38,335	0/0:16,0:15:33.01:0,33,302	1/1:3,12:14:36.11:415,36,0	1/1:2,15:17:39.12:450,39,0	0/0:15,0:14:36.02:0,36,329	0/0:16,0:16:42.02:0,42,384	0/0:9,0:9:24.01:0,24,219	0/0:13,0:13:39.02:0,39,357	1/1:2,15:16:39.12:450,39,0	0/0:14,0:14:36.01:0,36,329	0/0:21,0:21:57.03:0,57,522	0/0:13,0:13:33.02:0,33,302	0/0:15,0:15:36.01:0,36,330	1/1:3,9:12:30.06:332,30,0	1/1:3,20:23:62.80:700,63,0	1/1:3,14:16:47.81:513,48,0
chr10	7968116	.	CAGAGAGAG	C	175.89	PASS	AB=1.000;AC=3;AF=0.075;AN=40;BaseQRankSum=2.267;DP=470;FS=19.444;HRun=0;HaplotypeScore=120.8474;InbreedingCoeff=0.3919;MQ=67.13;MQ0=10;MQRankSum=-2.741;QD=5.33;ReadPosRankSum=0.785;VQSLOD=0.9671;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:19:11.81:0,12,115	0/0:7,0:7:3.48:0,3,47	./.	./.	./.	0/0:22,0:21:12.04:0,12,189	0/0:16,0:15:6.02:0,6,156	./.	0/0:20,0:19:9.01:0,9,142	0/0:22,0:22:13.36:0,13,139	0/0:19,0:19:3.01:0,3,43	0/0:22,0:24:9.03:0,9,296	0/0:22,0:22:6.28:0,6,128	./.	1/1:18,6:24:12.04:259,12,0	0/0:9,0:9:6.91:0,7,188	0/0:22,0:23:24.06:0,24,359	0/0:8,0:8:5.99:0,6,66	./.	0/0:19,0:18:15.02:0,15,172	./.	0/0:23,0:23:9.03:0,9,135	./.	0/1:9,0:8:0:0,0,0	0/0:12,0:12:6.02:0,6,91	0/0:15,0:14:6.15:0,6,31	0/0:16,0:16:1.36:0,1,3	0/0:17,0:16:9:0,9,91
chr10	7968279	.	G	GA	2015.72	PASS	AB=0.727;AC=19;AF=0.339;AN=56;BaseQRankSum=9.417;DP=570;FS=13.365;HRun=1;HaplotypeScore=106.2894;InbreedingCoeff=0.4465;MQ=46.82;MQ0=93;MQRankSum=-7.562;QD=10.18;ReadPosRankSum=-3.543;VQSLOD=-0.3111;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:2,2:11:4.87:0,5,28	0/0:7,0:8:11.30:0,11,214	0/0:54,0:3:9.03:0,9,114	0/0:71,0:11:7.80:0,8,182	1/1:14,13:23:1.94:19,2,0	0/0:19,0:25:26.96:0,27,533	0/0:19,1:19:38.43:0,38,543	1/1:14,2:16:23.46:265,23,0	0/0:13,0:18:0.66:0,1,342	0/1:13,9:20:99:349,0,258	0/1:9,8:17:19.27:19,0,48	0/0:12,5:12:8.96:0,9,86	0/1:12,6:16:42.37:217,0,42	0/0:6,3:8:11.99:0,12,141	1/1:8,14:17:12.30:109,12,0	1/1:5,8:10:17.90:183,18,0	0/0:22,1:28:30.13:0,30,790	0/1:3,4:7:20.96:170,0,21	0/0:18,0:18:51.04:0,51,648	0/0:23,0:26:48.55:0,49,714	0/0:4,1:4:3.01:0,3,37	0/0:13,7:20:17.88:0,18,188	0/1:10,2:11:4.02:4,0,33	0/0:8,0:6:6.02:0,6,78	0/0:23,0:20:34.28:0,34,683	1/1:4,13:16:35.09:527,35,0	1/1:10,9:14:8.94:182,9,0	1/1:4,4:6:12.01:154,12,0
chr10	7968284	.	G	GA	1384.95	PASS	AB=0.712;AC=14;AF=0.250;AN=56;BaseQRankSum=9.579;DP=547;FS=7.986;HRun=1;HaplotypeScore=102.1067;InbreedingCoeff=0.1996;MQ=43.03;MQ0=91;MQRankSum=-7.210;QD=8.01;ReadPosRankSum=-2.056;VQSLOD=-0.2216;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:9,2:11:8.82:9,0,39	0/0:8,0:8:9.35:0,9,188	0/0:47,0:2:6.02:0,6,83	0/0:61,0:8:11.52:0,12,125	0/1:14,11:22:1.78:16,0,2	0/0:27,0:24:23.81:0,24,496	0/0:18,0:17:37.26:0,37,528	1/1:14,1:15:23.25:221,23,0	0/0:21,0:20:0.15:0,0,351	0/1:4,9:19:99:305,0,242	0/0:3,6:14:12.01:0,12,129	0/0:7,4:12:8.99:0,9,88	0/1:5,6:16:26.17:152,0,26	0/0:3,3:11:12:0,12,129	0/1:11,10:16:0.44:43,0,0	1/1:7,8:12:1.90:130,2,0	0/0:29,1:28:24.33:0,24,756	0/1:2,3:6:9.66:131,0,10	0/0:19,0:18:39.55:0,40,555	0/0:29,0:25:47.46:0,47,688	0/0:5,0:3:1.52:0,2,39	0/0:10,7:20:21.02:0,21,224	0/0:4,2:10:2.90:0,3,24	0/0:8,0:8:15.02:0,15,165	0/0:25,0:22:47.18:0,47,671	0/1:4,8:11:8.70:292,0,9	0/1:13,5:14:21.07:111,0,21	1/1:6,4:8:6.55:129,7,0
chr10	7968287	.	GA	G	407.85	PASS	AB=0.892;AC=9;AF=0.161;AN=56;BaseQRankSum=8.460;DP=542;FS=5.212;HRun=2;HaplotypeScore=103.2166;InbreedingCoeff=-0.0202;MQ=41.87;MQ0=90;MQRankSum=-6.970;QD=3.29;ReadPosRankSum=-2.309;VQSLOD=-0.6104;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:8.96:0,9,106	0/0:9,0:9:24.06:0,24,319	0/0:43,0:2:5.98:0,6,56	0/0:55,1:6:5.97:0,6,46	0/0:22,3:22:19.72:0,20,206	0/0:27,0:24:50.74:0,51,661	0/0:20,0:19:48.63:0,49,703	0/0:19,0:15:2.36:0,2,113	0/0:21,0:20:48.13:0,48,657	0/1:18,3:19:99:139,0,144	0/0:14,0:14:9.11:0,9,61	0/0:17,0:12:9.11:0,9,76	1/1:18,0:16:5.12:71,5,0	0/0:10,1:11:8.87:0,9,71	0/1:18,4:17:6.98:7,0,114	0/1:15,0:12:55.61:56,0,130	0/0:28,0:26:57.20:0,57,859	0/1:6,0:6:13.92:43,0,14	0/0:17,0:16:45.12:0,45,643	0/0:29,0:25:65.48:0,65,882	0/0:5,0:3:2.82:0,3,43	0/0:20,0:20:16.43:0,16,136	0/0:10,1:10:1.55:0,2,4	0/0:10,0:8:12.02:0,12,68	0/0:24,0:21:57.19:0,57,841	0/1:10,2:11:84.71:101,0,85	0/1:16,4:15:60.60:61,0,151	0/1:8,2:8:64.15:64,0,107
chr10	7968288	.	A	AG	733.02	PASS	AB=0.839;AC=9;AF=0.161;AN=56;BaseQRankSum=7.999;DP=524;FS=0.000;HRun=1;HaplotypeScore=93.1820;InbreedingCoeff=-0.2256;MQ=42.33;MQ0=89;MQRankSum=-7.519;QD=5.39;ReadPosRankSum=-3.041;VQSLOD=-0.7382;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:9,1:10:8.94:0,9,100	0/0:9,0:9:23.28:0,23,281	0/0:42,0:2:5.97:0,6,52	0/0:52,0:4:5.97:0,6,46	0/0:19,4:20:19.03:0,19,178	0/0:27,0:24:50.43:0,50,598	0/0:20,0:19:47.88:0,48,646	0/1:25,0:19:58.61:59,0,144	0/0:23,0:22:46.30:0,46,541	0/1:15,3:16:99:183,0,211	0/0:8,4:12:11.87:0,12,84	0/0:13,3:11:11.88:0,12,98	0/1:12,5:15:19.66:108,0,20	0/0:10,2:11:11.68:0,12,100	0/1:16,3:14:29.41:29,0,69	0/1:7,7:11:99:103,0,111	0/0:26,1:26:55.97:0,56,754	0/1:3,2:5:23.40:78,0,23	0/0:17,0:16:45.08:0,45,596	0/0:28,0:24:65.57:0,66,797	0/0:5,0:3:3.01:0,3,42	0/0:14,4:18:20.70:0,21,175	0/0:10,1:10:2.85:0,3,18	0/0:11,0:9:9.31:0,9,84	0/0:24,0:21:57.17:0,57,771	0/1:7,1:7:86.11:97,0,86	0/1:19,1:15:99:99,0,142	0/1:8,2:8:85.28:115,0,85
chr10	7969980	.	GA	G	5560.93	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=17.480;DP=650;FS=1.393;HRun=8;HaplotypeScore=74.2538;InbreedingCoeff=0.9995;MQ=77.86;MQ0=0;MQRankSum=-1.385;QD=25.16;ReadPosRankSum=2.506;VQSLOD=5.7044;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,21:21:54.09:521,54,0	0/0:9,0:9:27.08:0,27,326	0/0:22,0:21:46.47:0,46,580	0/0:17,0:16:39.04:0,39,437	1/1:3,23:26:63.09:608,63,0	0/0:28,0:28:84.24:0,84,1002	0/0:17,0:17:45.14:0,45,544	1/1:0,30:30:90.15:868,90,0	0/0:21,0:21:60.17:0,60,714	0/0:26,0:26:66.20:0,66,797	0/0:22,0:22:66.20:0,66,793	0/0:23,0:23:66.18:0,66,776	0/0:27,0:27:78.23:0,78,930	0/0:24,0:24:63.19:0,63,758	1/1:1,29:30:81.13:782,81,0	1/1:2,24:26:60.10:579,60,0	0/0:15,0:15:45.11:0,45,529	0/0:25,0:25:67.76:0,68,800	0/0:17,0:17:48.15:0,48,580	0/0:39,0:39:99:0,111,1341	1/1:1,12:13:33.05:319,33,0	0/0:22,0:22:60.18:0,60,724	0/0:29,0:29:81.25:0,81,979	0/0:17,0:17:42.13:0,42,507	0/0:29,0:29:78.23:0,78,931	1/1:7,25:32:75.11:724,75,0	1/1:3,32:35:96.15:926,96,0	1/1:0,8:8:24.04:232,24,0
chr10	7970922	.	CCAGGCA	C	1360.58	PASS	AB=0.714;AC=17;AF=0.315;AN=54;BaseQRankSum=5.953;DP=427;FS=26.165;HRun=0;HaplotypeScore=102.0664;InbreedingCoeff=0.6204;MQ=59.25;MQ0=4;MQRankSum=-6.064;QD=8.20;ReadPosRankSum=-0.546;VQSLOD=0.4117;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:8.92:0,9,91	0/0:6,0:5:15.05:0,15,422	0/0:12,0:11:13.82:0,14,420	0/0:22,0:16:24:0,24,345	./.	0/0:16,0:16:39.12:0,39,1102	0/0:33,0:32:82.57:0,83,2180	0/0:3,0:3:0:0,0,0	0/0:23,0:23:57.19:0,57,1386	1/1:4,11:15:33.11:661,33,0	1/1:1,7:8:1.88:64,2,0	1/1:3,18:21:12.03:191,12,0	1/1:1,15:15:12.04:219,12,0	1/1:3,17:20:9.03:198,9,0	0/0:6,0:6:5.80:0,6,58	0/0:4,0:4:3.01:0,3,34	0/0:42,0:41:99:0,102,2759	0/1:6,11:14:19.92:51,0,20	0/0:15,0:15:21:0,21,429	0/0:15,0:15:20.99:0,21,428	0/0:13,0:13:12.29:0,12,94	1/1:1,12:13:10.14:76,10,0	1/1:2,9:11:3.01:66,3,0	0/1:5,34:39:0:0,0,0	0/0:23,0:23:57.19:0,57,1513	0/0:9,0:9:5.98:0,6,60	0/1:6,0:6:0.68:1,0,31	0/0:1,0:1:1.82:0,2,5
chr10	7971959	.	TTA	T	2361.27	PASS	AB=0.848;AC=29;AF=0.604;AN=48;BaseQRankSum=-0.057;DP=241;FS=0.000;HRun=0;HaplotypeScore=51.5280;InbreedingCoeff=0.5304;MQ=80.18;MQ0=3;MQRankSum=-0.592;QD=13.81;ReadPosRankSum=1.428;VQSLOD=3.2871;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:16.95:0,17,132	./.	0/0:16,0:7:6.47:0,6,64	0/1:20,1:12:12.32:35,0,12	1/1:2,8:10:18.05:216,18,0	0/0:2,0:8:15:0,15,132	0/0:4,0:5:3:0,3,26	1/1:17,18:36:56.94:606,57,0	./.	0/1:4,3:7:11.90:96,0,12	1/1:1,2:3:6.02:72,6,0	1/1:4,3:7:9.03:108,9,0	1/1:3,4:7:12.04:144,12,0	1/1:3,3:6:9.03:108,9,0	1/1:1,5:6:12.04:144,12,0	1/1:3,3:6:9.03:108,9,0	0/1:14,2:16:32.82:33,0,484	1/1:1,5:6:9.03:108,9,0	0/0:0,0:3:6:0,6,53	0/0:4,0:5:6.01:0,6,74	0/0:4,0:5:3:0,3,26	./.	1/1:3,3:6:9.03:108,9,0	./.	0/0:1,0:4:9:0,9,79	1/1:5,6:11:18.01:189,18,0	1/1:3,6:9:8.10:170,8,0	1/1:6,8:14:24.07:288,24,0
chr10	7972232	.	G	GCA	2924.58	PASS	AB=0.773;AC=38;AF=0.731;AN=52;BaseQRankSum=-0.860;DP=510;FS=6.266;HRun=0;HaplotypeScore=92.5471;InbreedingCoeff=-0.3207;MQ=66.03;MQ0=7;MQRankSum=-0.320;QD=6.53;ReadPosRankSum=-0.258;VQSLOD=2.6619;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:33,0:33:15.46:135,15,0	1/1:4,2:6:9.01:112,9,0	./.	./.	0/0:14,0:14:0:0,0,0	0/1:13,9:25:34.63:77,0,35	1/1:8,6:15:6.92:253,7,0	1/1:34,0:34:24.32:196,24,0	0/1:12,5:17:46.98:154,0,47	0/1:25,0:25:17.44:193,0,17	1/1:10,6:14:9.03:134,9,0	0/1:18,8:26:70.65:207,0,71	0/1:9,9:18:54.90:240,0,55	0/1:16,5:24:72.34:162,0,72	1/1:14,0:13:3.88:27,4,0	1/1:17,0:17:9.46:77,9,0	1/1:14,0:13:5.98:48,6,0	0/1:7,4:12:24.34:184,0,24	0/1:10,1:11:6.47:62,0,6	0/1:9,5:14:19.91:80,0,20	1/1:21,0:20:8.97:71,9,0	1/1:3,0:9:6:52,6,0	0/1:13,4:16:26.51:38,0,27	0/1:15,6:21:9.34:266,0,9	0/1:8,9:18:23.49:80,0,23	1/1:15,1:14:11.96:96,12,0	1/1:17,0:17:11.95:96,12,0	1/1:7,0:7:3:25,3,0
chr10	7972242	.	A	ACACACACACACACG	3172.03	PASS	AB=0.896;AC=14;AF=0.250;AN=56;BaseQRankSum=0.032;DP=536;FS=7.635;HRun=0;HaplotypeScore=185.5721;InbreedingCoeff=0.2794;MQ=54.23;MQ0=12;MQRankSum=-4.995;QD=14.82;ReadPosRankSum=-1.953;VQSLOD=1.4843;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:35,0:35:43.89:345,0,44	0/0:7,0:7:15.90:0,16,204	0/0:21,0:9:11.98:0,12,113	0/0:33,0:11:20.99:0,21,192	0/1:2,11:15:0:0,0,0	0/0:26,0:26:30:0,30,498	0/0:16,0:16:0.67:0,1,511	0/1:32,0:32:1.72:562,0,2	0/0:18,0:18:42.03:0,42,643	0/0:26,0:26:24.21:0,24,411	0/0:13,0:10:17.77:0,18,252	0/0:23,0:23:24.11:0,24,719	0/0:19,0:19:43.21:0,43,813	0/0:22,0:22:36.03:0,36,680	1/1:14,1:14:16.03:309,16,0	0/1:10,9:24:23:548,0,23	0/1:14,0:13:99:139,0,193	0/0:12,0:12:30.16:0,30,500	0/0:9,0:9:21.65:0,22,213	0/0:15,0:15:21.02:0,21,347	0/1:19,0:18:12.79:84,0,13	0/1:13,0:12:6.56:7,0,102	0/0:16,0:15:23.50:0,23,317	0/0:24,0:24:54.41:0,54,694	0/0:22,0:21:24.02:0,24,374	0/1:20,0:18:13.75:518,0,14	1/1:18,0:18:9.04:612,9,0	1/1:0,6:9:3.01:204,3,0
chr10	7972248	.	A	ACACACACACACG	1048.15	PASS	AB=0.992;AC=11;AF=0.196;AN=56;BaseQRankSum=1.478;DP=542;FS=0.824;HRun=0;HaplotypeScore=160.1200;InbreedingCoeff=0.2673;MQ=51.91;MQ0=13;MQRankSum=-3.968;QD=6.31;ReadPosRankSum=2.239;VQSLOD=2.3047;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,15:38:1.79:317,2,0	0/0:8,0:8:18.89:0,19,201	0/0:26,0:10:12:0,12,120	0/0:32,0:9:18:0,18,171	0/0:18,0:18:2.66:0,3,24	0/0:28,0:28:38.05:0,38,516	0/0:14,0:14:27.75:0,28,436	0/1:33,0:33:37.12:37,0,309	0/0:17,0:17:36.03:0,36,534	0/0:23,0:23:2.85:0,3,353	0/0:13,0:10:18.02:0,18,225	0/0:18,0:18:33.06:0,33,554	0/0:20,0:20:46.17:0,46,724	0/0:22,0:22:41.39:0,41,635	0/1:15,0:14:99:107,0,138	0/1:22,0:23:39.33:389,0,39	0/1:14,0:13:75.43:75,0,118	0/0:12,0:12:29.74:0,30,436	0/0:10,0:10:18.85:0,19,175	0/0:15,0:15:18.02:0,18,283	1/1:20,0:19:14.86:131,15,0	0/1:14,0:13:7.13:7,0,76	0/0:17,0:16:20.99:0,21,279	0/0:23,0:23:54.40:0,54,626	0/0:21,0:20:24.01:0,24,333	0/0:20,0:18:41.01:0,41,336	0/0:19,0:19:29.44:0,29,215	1/1:9,0:9:3.01:130,3,0
chr10	7972252	.	A	ACG	377.21	PASS	AB=0.976;AC=17;AF=0.304;AN=56;BaseQRankSum=7.295;DP=549;FS=3.258;HRun=0;HaplotypeScore=86.6453;InbreedingCoeff=-0.3254;MQ=50.58;MQ0=14;MQRankSum=2.484;QD=1.29;ReadPosRankSum=10.018;VQSLOD=0.0808;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:36,0:36:3:3,0,76	0/1:8,0:8:20.29:20,0,83	0/0:25,0:8:23.99:0,24,225	0/0:34,0:10:27.03:0,27,263	0/0:15,0:15:5.99:0,6,50	0/0:30,0:30:7.88:0,8,321	0/1:14,0:14:85.73:86,0,90	0/0:33,0:33:1.80:0,2,511	0/1:19,0:19:21.44:21,0,305	0/0:24,0:24:51.50:0,51,405	0/1:12,0:9:42.73:43,0,57	0/1:19,0:19:58.89:59,0,200	0/1:22,0:22:63.56:64,0,308	0/1:24,0:24:18.16:18,0,288	0/0:17,0:16:12.40:0,12,177	0/1:20,0:20:24.64:25,0,87	0/0:14,0:13:22.93:0,23,166	0/1:13,0:13:59.93:60,0,138	0/0:10,0:10:11.13:0,11,200	0/1:14,0:14:15.16:15,0,146	0/1:10,12:22:26.81:27,0,80	0/0:15,0:14:10.55:0,11,96	0/1:16,0:15:4.91:5,0,133	0/1:23,0:23:64.08:64,0,251	0/1:21,0:20:10.18:10,0,169	0/0:21,0:19:49.20:0,49,383	0/0:18,0:18:25.47:0,25,282	1/1:9,0:9:2.49:9,2,0
chr10	7974222	.	TC	T	5182.59	PASS	AB=0.780;AC=18;AF=0.321;AN=56;BaseQRankSum=11.560;DP=578;FS=1.511;HRun=6;HaplotypeScore=65.6884;InbreedingCoeff=0.8732;MQ=76.64;MQ0=1;MQRankSum=-0.327;QD=23.03;ReadPosRankSum=2.507;VQSLOD=4.3579;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,18:23:50.94:548,51,0	0/0:10,0:10:27.09:0,27,355	0/1:33,0:27:0.53:1,0,403	0/0:36,0:29:59.63:0,60,767	1/1:2,27:29:81.20:868,81,0	0/0:23,0:23:69.22:0,69,907	0/0:12,0:12:28.25:0,28,425	1/1:5,21:26:63.61:668,64,0	0/0:16,0:16:45.15:0,45,587	0/0:12,0:12:36.12:0,36,473	0/0:20,0:20:57.18:0,57,730	0/0:15,0:15:42.14:0,42,551	0/0:19,0:19:57.14:0,57,704	0/0:15,0:15:42.13:0,42,544	1/1:0,19:19:54.14:580,54,0	1/1:1,16:17:51.13:547,51,0	0/0:27,0:27:78.25:0,78,1013	0/0:21,0:21:51.17:0,51,665	0/0:13,0:13:36.12:0,36,467	0/0:31,0:31:90.27:0,90,1165	1/1:1,9:10:27.07:290,27,0	0/0:20,0:20:54.18:0,54,709	0/0:20,0:20:54.18:0,54,706	0/0:17,0:17:51.17:0,51,671	0/0:26,0:26:72.23:0,72,932	0/1:5,18:23:18.81:520,0,19	1/1:3,30:33:84.21:903,84,0	1/1:3,8:11:24.06:258,24,0
chr10	7975314	.	C	CAATA	11382.78	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-7.675;DP=582;FS=43.009;HRun=0;HaplotypeScore=93.8302;InbreedingCoeff=0.9721;MQ=90.35;MQ0=0;MQRankSum=-8.483;QD=69.83;ReadPosRankSum=1.226;VQSLOD=3.1695;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,14:17:38.62:985,39,0	0/0:13,0:13:39.13:0,39,779	0/0:25,0:25:72.11:0,72,1187	0/0:25,0:25:72.22:0,72,1330	1/1:3,19:22:57.19:1544,57,0	0/0:18,0:18:54.17:0,54,1042	0/0:29,0:29:84.29:0,84,1671	1/1:11,7:20:51.13:1300,51,0	0/0:24,0:24:69.22:0,69,1343	0/0:33,0:32:77.33:0,77,1824	0/0:17,0:17:25.56:0,26,898	0/0:23,0:23:63.22:0,63,1242	0/0:27,0:27:78.21:0,78,1556	0/0:28,0:28:78.25:0,78,1511	1/1:4,21:26:72.25:1983,72,0	1/1:2,13:14:39.13:1064,39,0	0/0:15,0:15:45.04:0,45,817	0/0:13,0:13:36.12:0,36,718	0/0:18,0:18:54.17:0,54,1042	0/0:18,0:18:54.16:0,54,1008	1/1:4,18:22:54.19:1508,54,0	0/0:27,0:27:78.27:0,78,1558	0/0:25,0:25:75.26:0,75,1486	0/0:15,0:15:45.15:0,45,895	0/0:26,0:26:75.26:0,75,1477	1/1:6,13:23:66.17:1574,66,0	1/1:2,15:17:48.16:1342,48,0	1/1:0,1:1:3.01:84,3,0
chr10	7975390	.	T	TACACAC	4269.79	PASS	AB=0.929;AC=32;AF=0.615;AN=52;BaseQRankSum=-0.824;DP=559;FS=9.530;HRun=0;HaplotypeScore=143.0873;InbreedingCoeff=0.6243;MQ=54.68;MQ0=16;MQRankSum=-5.629;QD=11.99;ReadPosRankSum=0.673;VQSLOD=3.6580;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:20:34.91:0,35,529	0/0:21,0:21:39.50:0,39,549	1/1:31,0:9:0.47:1,0,0	0/0:26,0:11:8.19:0,8,147	1/1:19,0:17:9.03:186,9,0	0/0:26,0:26:52.10:0,52,612	0/0:22,0:22:5.05:0,5,359	1/1:25,0:25:21.07:340,21,0	0/0:20,0:20:33.40:0,33,362	1/1:28,0:29:63.94:1306,64,0	1/1:19,0:21:9.03:209,9,0	0/1:12,3:20:0.09:0,0,0	1/1:20,1:22:21.02:402,21,0	1/1:17,1:18:6.02:103,6,0	1/1:16,0:17:9.02:195,9,0	1/1:9,0:8:12.02:199,12,0	0/0:13,0:13:1.17:0,1,263	1/1:13,0:12:2.88:15,3,0	0/0:14,0:14:7.02:0,7,226	0/1:33,0:33:9.83:10,0,633	./.	1/1:15,0:15:12.04:270,12,0	./.	0/1:17,0:16:0:0,0,0	0/1:23,0:23:2.14:2,0,480	1/1:22,0:18:30.10:655,30,0	1/1:13,0:12:9.03:148,9,0	1/1:4,0:4:9.03:227,9,0
chr10	7975408	.	C	CACACACAC	4324.49	PASS	AB=1.000;AC=34;AF=0.630;AN=54;BaseQRankSum=1.308;DP=574;FS=1.196;HRun=0;HaplotypeScore=165.6634;InbreedingCoeff=0.6765;MQ=46.88;MQ0=17;MQRankSum=-7.072;QD=12.61;ReadPosRankSum=-3.539;VQSLOD=3.4099;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:20:33.84:0,34,651	0/0:23,0:23:41.59:0,42,759	1/1:23,0:3:0.89:2,1,0	0/0:21,0:7:8.19:0,8,169	1/1:20,0:18:9.03:233,9,0	0/0:31,0:30:53.46:0,53,852	0/0:24,0:24:4.84:0,5,477	1/1:28,0:27:8.72:192,9,0	0/0:22,0:22:33.43:0,33,516	1/1:33,0:33:55.71:1008,56,0	1/1:20,0:20:8.63:159,9,0	1/1:18,0:18:0.94:2,1,0	1/1:28,0:27:11.38:419,11,0	1/1:23,0:21:6.02:103,6,0	1/1:15,0:14:9.03:199,9,0	1/1:8,0:7:11.74:257,12,0	0/0:21,0:21:0.96:0,1,344	1/1:8,4:11:12.29:222,12,0	0/0:14,0:14:8.50:0,8,304	0/1:41,0:40:10.04:10,0,933	0/1:7,0:7:0:0,0,0	1/1:14,0:13:12.04:220,12,0	./.	1/1:16,0:15:0.47:1,0,0	0/0:22,0:22:17.69:0,18,663	1/1:20,0:16:27.09:753,27,0	1/1:12,0:11:9.50:182,10,0	1/1:5,0:4:12.04:364,12,0
chr10	7975414	.	C	CAGAGAGAG	2140.37	PASS	AB=0.737;AC=31;AF=0.596;AN=52;BaseQRankSum=3.717;DP=626;FS=48.746;HRun=0;HaplotypeScore=186.6004;InbreedingCoeff=0.6318;MQ=46.59;MQ0=17;MQRankSum=-7.310;QD=5.53;ReadPosRankSum=-1.833;VQSLOD=1.1126;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:21:16.26:107,16,0	0/0:21,0:23:28.27:0,28,893	./.	0/0:21,0:7:3.01:0,3,40	0/1:22,0:19:0:0,0,0	0/0:31,0:31:15.08:0,15,975	0/0:21,0:21:38.83:0,39,804	1/1:32,0:30:40.92:303,41,0	0/0:20,0:21:32.55:0,33,570	1/1:24,7:40:43.60:827,44,0	0/1:10,10:26:0.24:0,0,0	1/1:19,1:20:6.49:148,6,0	1/1:14,11:34:11.99:202,12,0	1/1:10,1:22:3.01:35,3,0	./.	1/1:10,0:7:2.54:11,3,0	0/0:22,0:22:11.30:0,11,672	1/1:16,1:15:21.45:324,21,0	0/1:11,0:13:8.02:8,0,234	0/0:40,0:39:58.84:0,59,1520	1/1:9,0:8:2.60:10,3,0	1/1:10,5:19:2.85:42,3,0	0/1:5,0:34:0:0,0,0	0/1:2,2:21:0.01:0,0,0	0/0:22,0:23:36.12:0,36,833	1/1:23,0:18:28.92:196,29,0	1/1:13,0:11:2.04:6,2,0	1/1:5,0:4:8.99:88,9,0
chr10	7975442	.	GAC	G	116.50	PASS	AB=0.986;AC=10;AF=0.185;AN=54;BaseQRankSum=5.241;DP=690;FS=24.252;HRun=0;HaplotypeScore=161.5615;InbreedingCoeff=0.0151;MQ=48.64;MQ0=23;MQRankSum=-2.272;QD=0.46;ReadPosRankSum=-0.230;VQSLOD=1.2930;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:24:72.05:72,0,135	0/1:26,0:26:23.63:24,0,403	0/0:27,0:11:19.19:0,19,215	0/1:45,0:11:1.09:1,0,123	0/0:34,0:31:0.47:0,0,1	0/0:31,0:30:52.24:0,52,586	0/0:22,0:22:40.25:0,40,459	0/1:46,4:46:75.80:76,0,709	0/0:23,0:23:2.98:0,3,247	0/1:41,0:41:1.41:1,0,610	0/0:21,1:22:11.98:0,12,97	0/0:16,1:17:17.63:0,18,160	0/1:24,1:24:0.79:1,0,68	0/0:27,0:25:19.14:0,19,151	./.	0/0:11,0:9:2.04:0,2,6	0/0:26,0:26:30.45:0,30,354	0/1:17,0:14:9.94:10,0,242	0/1:22,0:21:6.22:6,0,267	0/0:50,0:48:77.86:0,78,877	0/0:9,0:8:2.80:0,3,24	0/0:17,1:17:2.18:0,2,166	0/0:21,0:21:14.96:0,15,121	0/0:21,0:20:11.92:0,12,89	0/0:23,0:23:16.59:0,17,521	0/0:24,0:22:4.55:0,5,191	0/0:16,0:15:4.43:0,4,62	1/1:4,0:4:8.39:46,8,0
chr10	7975456	.	CAG	C	305.16	PASS	AB=0.921;AC=8;AF=0.143;AN=56;BaseQRankSum=8.745;DP=726;FS=18.175;HRun=0;HaplotypeScore=160.0638;InbreedingCoeff=0.5043;MQ=54.85;MQ0=22;MQRankSum=-6.857;QD=2.88;ReadPosRankSum=-0.163;VQSLOD=1.3015;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,2:22:15.92:0,16,510	0/0:24,0:24:60.07:0,60,1001	0/0:51,0:18:48:0,48,751	0/0:63,0:25:47.38:0,47,850	0/0:32,2:31:0.47:0,0,1	0/0:27,0:27:72.19:0,72,1200	0/0:22,0:22:48.07:0,48,817	0/1:48,4:50:84.33:84,0,670	0/0:25,0:25:75.17:0,75,1293	0/0:34,0:34:44.28:0,44,1336	0/0:23,0:23:30.10:0,30,509	0/0:12,0:12:18.06:0,18,319	0/0:27,0:27:30.44:0,30,462	0/0:24,0:22:26.45:0,26,420	1/1:11,1:10:0.47:1,0,0	0/0:15,0:13:5.05:0,5,54	0/0:27,0:27:37.34:0,37,915	0/0:17,0:16:38.96:0,39,621	0/0:24,0:23:66.12:0,66,980	0/0:46,0:45:99:0,123,2092	0/0:11,0:11:11.85:0,12,202	0/0:19,0:18:27.08:0,27,451	0/0:19,0:19:30.10:0,30,532	0/0:26,0:25:24.06:0,24,382	0/0:24,0:24:63.20:0,63,1090	0/1:19,2:19:76.27:226,0,76	1/1:17,0:16:13.92:100,14,0	1/1:4,0:4:2.88:15,3,0
chr10	7975458	.	G	GAGAT	1370.19	PASS	AB=0.979;AC=12;AF=0.214;AN=56;BaseQRankSum=9.731;DP=740;FS=30.809;HRun=0;HaplotypeScore=180.1260;InbreedingCoeff=0.3691;MQ=54.95;MQ0=24;MQRankSum=-8.971;QD=6.68;ReadPosRankSum=-1.416;VQSLOD=0.7710;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:22:11.08:0,11,538	0/0:25,0:25:63.06:0,63,1075	0/0:57,0:19:24.32:0,24,808	0/0:67,0:25:38.77:0,39,908	1/1:31,3:31:0.42:1,0,0	0/0:27,0:27:72.20:0,72,1260	0/0:22,0:22:48.11:0,48,873	0/1:51,0:49:99:491,0,110	0/0:26,0:26:75.17:0,75,1371	0/1:37,0:37:17.90:18,0,1419	0/0:23,0:23:30.10:0,30,537	0/0:12,0:12:18.06:0,18,335	0/1:25,0:25:11.89:12,0,435	0/0:23,0:22:26.45:0,26,444	1/1:11,1:10:3.01:38,3,0	0/0:12,3:13:2.92:0,3,48	0/0:27,0:27:43.70:0,44,1000	0/0:17,0:16:42.01:0,42,734	0/0:25,0:24:66.12:0,66,1017	0/0:47,0:46:99:0,126,2248	0/0:11,0:11:11.96:0,12,211	0/0:19,0:18:26.98:0,27,480	0/0:18,0:18:30.10:0,30,569	0/0:26,0:26:24.06:0,24,405	0/0:24,0:24:63.20:0,63,1162	0/1:20,2:20:44.40:636,0,44	1/1:14,2:16:17.09:306,17,0	1/1:7,0:7:2.50:9,2,0
chr10	7975462	.	GACAGACAT	G	2231.92	PASS	AB=0.700;AC=7;AF=0.130;AN=54;BaseQRankSum=8.044;DP=716;FS=17.916;HRun=0;HaplotypeScore=206.5827;InbreedingCoeff=0.7361;MQ=56.81;MQ0=23;MQRankSum=-7.576;QD=23.25;ReadPosRankSum=-2.318;VQSLOD=1.7743;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:21:26.85:0,27,1128	0/0:23,0:23:57.17:0,57,1684	0/0:59,0:20:56.77:0,57,1088	0/0:64,0:25:44.89:0,45,1750	0/0:9,26:32:0.42:0,0,1	0/0:27,0:27:56.98:0,57,1980	0/0:19,0:19:47.90:0,48,1428	1/1:13,30:41:79.80:1167,80,0	0/0:26,0:26:72.22:0,72,2758	0/0:34,1:35:12.48:0,12,3072	0/0:18,0:18:30.99:0,31,1184	0/0:12,0:12:24.08:0,24,841	0/0:23,0:23:18.35:0,18,916	0/0:21,0:20:27.02:0,27,928	1/1:11,4:13:9.03:181,9,0	0/0:4,12:14:5.05:0,5,105	0/0:27,0:27:53.26:0,53,1898	0/0:18,0:18:39.60:0,40,1381	0/0:22,0:21:53.90:0,54,1577	0/0:47,0:46:99:0,114,3892	0/0:11,0:11:14.96:0,15,503	0/0:19,0:18:33.58:0,34,1103	0/0:19,0:19:32.93:0,33,1305	0/0:25,0:25:29.97:0,30,1019	0/0:22,0:22:63.07:0,63,1883	0/1:12,9:19:99:692,0,151	1/1:3,14:17:18.03:333,18,0	./.
chr10	7975546	.	C	CAG	787.29	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-2.381;DP=694;FS=3.317;HRun=0;HaplotypeScore=94.2724;InbreedingCoeff=0.9836;MQ=76.46;MQ0=0;MQRankSum=-2.268;QD=32.80;ReadPosRankSum=2.012;VQSLOD=6.1044;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,21:24:51.17:882,51,0	0/0:10,0:10:30.10:0,30,399	0/0:31,0:30:72.24:0,72,958	0/0:31,0:29:64.59:0,65,803	0/0:33,0:33:87.29:0,87,1157	0/0:37,0:37:96.31:0,96,1277	0/0:18,0:18:48.14:0,48,624	0/0:50,0:50:99:0,123,1631	0/0:24,0:24:60.20:0,60,799	0/0:33,0:33:81.26:0,81,1078	0/0:32,0:32:81.25:0,81,1058	0/0:18,0:18:54.18:0,54,719	0/0:15,0:15:32.97:0,33,414	0/0:20,0:20:60.20:0,60,798	0/0:25,0:25:72.22:0,72,942	0/0:21,0:21:39.08:0,39,485	0/0:17,0:17:48.16:0,48,639	0/0:16,0:16:39.13:0,39,519	0/0:29,0:29:78.25:0,78,1022	0/0:38,0:38:99:0,102,1324	0/0:19,0:19:48.12:0,48,605	0/0:21,0:21:57.17:0,57,743	0/0:25,0:25:66.20:0,66,862	0/0:20,0:20:45.13:0,45,582	0/0:20,0:20:60.20:0,60,799	0/0:27,0:27:72.24:0,72,955	0/0:29,0:28:69.21:0,69,902	0/0:11,0:11:15.05:0,15,200
chr10	7978901	.	TTTAACTCTTGTTAC	T	12805.11	PASS	AB=0.512;AC=12;AF=0.214;AN=56;BaseQRankSum=15.685;DP=583;FS=0.837;HRun=0;HaplotypeScore=229.9345;InbreedingCoeff=0.7858;MQ=85.19;MQ0=0;MQRankSum=-14.761;QD=95.56;ReadPosRankSum=2.223;VQSLOD=4.7684;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,114,6731	0/0:14,0:14:42.14:0,42,2751	0/0:18,0:18:54.19:0,54,3191	0/0:24,0:24:72.18:0,72,3919	1/1:0,26:26:54.18:2145,54,0	0/0:31,0:31:93.30:0,93,6170	0/0:18,0:18:54.18:0,54,3243	1/1:0,17:17:51.07:1757,51,0	0/0:18,0:18:54.19:0,54,3871	0/0:31,0:31:93.32:0,93,6419	0/0:21,0:21:63.22:0,63,4076	0/0:17,0:17:51.18:0,51,3380	0/0:16,0:16:48.16:0,48,3032	0/0:17,0:17:51.18:0,51,3403	1/1:0,21:21:48.16:2120,48,0	0/1:1,17:18:99:1810,0,172	0/0:24,0:24:72.24:0,72,4831	0/0:10,0:10:27.09:0,27,1627	0/0:15,0:15:45.12:0,45,2266	0/0:33,0:33:99:0,99,6230	0/0:21,0:21:63.21:0,63,4244	0/0:18,0:18:54.19:0,54,3745	0/0:29,0:29:87.29:0,87,5857	0/0:20,0:20:60.15:0,60,3500	0/0:16,0:16:48.16:0,48,3284	0/1:1,23:24:99:2190,0,151	1/1:0,21:21:44.69:1988,45,0	1/1:0,7:7:18.06:795,18,0
chr10	7980111	.	C	CA	5897.35	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-15.430;DP=679;FS=6.276;HRun=7;HaplotypeScore=61.3649;InbreedingCoeff=0.9911;MQ=79.86;MQ0=1;MQRankSum=0.926;QD=30.09;ReadPosRankSum=0.438;VQSLOD=5.2365;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:75.07:0,75,716	0/0:15,0:15:45.07:0,45,435	0/0:20,0:20:33.94:0,34,285	0/0:15,0:15:35.92:0,36,330	1/1:2,32:33:84.22:998,84,0	0/0:22,0:22:60.10:0,60,579	0/0:27,0:27:72.11:0,72,695	1/1:4,22:27:69.08:812,69,0	0/0:30,0:30:84.11:0,84,803	0/0:37,0:37:99:0,99,956	0/0:21,0:21:57.09:0,57,550	0/0:22,0:22:57.07:0,57,544	0/0:24,0:24:60.08:0,60,579	0/0:26,0:26:72.09:0,72,687	1/1:1,30:30:87.27:1051,87,0	1/1:4,22:26:11.25:703,11,0	0/0:30,0:30:90.13:0,90,864	0/0:22,0:22:60.07:0,60,572	0/0:16,0:16:33.04:0,33,315	0/0:26,0:26:66.09:0,66,632	1/1:1,24:25:69.21:834,69,0	0/0:26,0:26:72.09:0,72,687	0/0:24,0:24:69.08:0,69,659	0/0:30,0:30:90.15:0,90,869	0/0:22,0:22:54.07:0,54,521	1/1:3,23:26:43.21:781,43,0	1/1:3,15:18:45.13:537,45,0	1/1:0,9:9:15.05:181,15,0
chr10	7980215	.	GT	G	11343.29	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=13.899;DP=670;FS=1.830;HRun=8;HaplotypeScore=67.4524;InbreedingCoeff=0.9520;MQ=75.50;MQ0=0;MQRankSum=-0.084;QD=24.99;ReadPosRankSum=2.011;VQSLOD=5.7836;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,35:36:96.15:927,96,0	0/0:13,0:13:30.07:0,30,341	0/0:17,0:17:29.99:0,30,319	0/0:6,0:6:1.62:0,2,58	1/1:3,22:25:51.07:493,51,0	0/0:28,0:28:75.23:0,75,906	0/0:32,0:31:90.26:0,90,1074	1/1:0,31:31:93.13:892,93,0	0/0:19,0:19:54.17:0,54,652	1/1:2,29:31:87.10:830,87,0	1/1:0,19:19:54.09:521,54,0	1/1:1,25:26:75.12:724,75,0	1/1:1,18:19:44.75:434,45,0	1/1:1,26:27:78.13:753,78,0	1/1:1,17:18:45.07:435,45,0	1/1:2,22:24:26.86:543,27,0	0/0:28,2:30:29.31:0,29,909	1/1:3,30:33:84.07:800,84,0	0/0:16,0:16:36.08:0,36,401	0/0:29,0:29:78.23:0,78,932	1/1:3,30:33:81.13:782,81,0	1/1:3,20:23:60.09:579,60,0	1/1:3,26:29:69.10:666,69,0	1/1:3,23:26:69.11:666,69,0	0/0:26,0:26:72.20:0,72,856	1/1:1,22:23:66.09:631,66,0	1/1:1,24:25:63.03:608,63,0	1/1:4,2:6:6.01:58,6,0
chr10	7983021	.	T	TTCTC	2366.24	PASS	AB=0.871;AC=26;AF=0.542;AN=48;BaseQRankSum=1.220;DP=553;FS=20.774;HRun=0;HaplotypeScore=112.7829;InbreedingCoeff=0.4392;MQ=63.06;MQ0=18;MQRankSum=0.019;QD=7.97;ReadPosRankSum=-0.796;VQSLOD=1.2921;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:18,0:26:0:0,0,0	1/1:11,0:10:2.21:87,2,0	0/0:25,0:17:2.89:0,3,45	./.	0/0:17,0:17:16.30:0,16,227	0/1:27,0:25:2.94:345,0,3	0/1:24,0:23:33.67:172,0,34	0/0:29,0:30:10.27:0,10,147	1/1:6,5:9:3.01:68,3,0	1/1:31,0:31:34.89:432,35,0	./.	1/1:16,0:16:12.49:185,12,0	1/1:12,0:16:6.02:112,6,0	1/1:17,0:17:3.01:36,3,0	0/0:13,0:13:8.36:0,8,122	0/0:9,0:9:5.75:0,6,56	1/1:14,11:27:0.28:121,0,0	1/1:4,0:4:7.27:108,7,0	0/1:17,1:25:48.23:175,0,48	1/1:28,0:28:15.51:218,16,0	./.	0/0:12,1:14:0:0,0,0	./.	1/1:11,0:12:6.02:88,6,0	1/1:16,0:16:26.30:374,26,0	0/0:22,0:20:22.88:0,23,325	0/0:28,0:27:26.30:0,26,341	0/0:13,0:12:2.52:0,3,208
chr10	7983057	.	C	CTG	953.67	PASS	AB=0.910;AC=20;AF=0.357;AN=56;BaseQRankSum=-0.200;DP=506;FS=4.839;HRun=0;HaplotypeScore=97.1729;InbreedingCoeff=0.0605;MQ=49.31;MQ0=17;MQRankSum=-0.290;QD=3.27;ReadPosRankSum=2.048;VQSLOD=1.6124;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:29:14.96:118,15,0	0/1:7,0:7:6.06:6,0,61	0/0:17,0:4:2.81:0,3,14	0/1:16,0:5:2.86:3,0,23	0/1:12,15:26:28.31:40,0,28	0/0:27,0:27:3.73:0,4,209	0/0:21,0:20:17.94:0,18,145	0/1:24,0:23:4.61:198,0,5	0/0:12,0:11:10.55:0,11,78	0/1:24,0:24:50.93:51,0,157	0/1:14,0:12:13.23:13,0,61	0/0:22,0:22:4.99:0,5,220	0/1:11,0:11:14.62:15,0,85	0/0:14,0:14:11.78:0,12,96	0/1:12,0:12:25.40:76,0,25	0/1:2,4:6:7.93:40,0,8	0/0:25,0:25:25.53:0,26,197	0/0:9,0:9:13.64:0,14,128	0/1:19,0:17:30.62:31,0,74	0/0:23,0:22:22.51:0,23,175	1/1:11,0:11:11.96:97,12,0	0/0:11,0:11:17.59:0,18,146	0/0:17,0:14:17.95:0,18,144	0/0:15,0:14:18.97:0,19,163	0/1:20,0:20:17.81:18,0,134	1/1:14,10:22:16.93:215,17,0	0/1:14,13:26:28.29:41,0,28	1/1:15,1:17:10.81:165,11,0
chr10	7984851	.	C	CT	15124.30	PASS	AB=0.519;AC=29;AF=0.518;AN=56;BaseQRankSum=-12.056;DP=703;FS=1.946;HRun=3;HaplotypeScore=66.9936;InbreedingCoeff=0.9553;MQ=90.15;MQ0=0;MQRankSum=-4.455;QD=42.01;ReadPosRankSum=-0.290;VQSLOD=4.1237;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:87.27:0,87,1187	1/1:0,11:11:24.08:384,24,0	0/0:26,0:26:52.68:0,53,935	0/0:27,0:27:75.21:0,75,999	1/1:0,27:27:72.24:1140,72,0	1/1:1,23:24:69.24:1103,69,0	1/1:0,23:23:54.18:863,54,0	1/1:0,31:31:90.28:1390,90,0	1/1:0,28:28:78.27:1247,78,0	0/0:30,0:30:87.28:0,87,1201	0/0:28,0:28:84.28:0,84,1174	0/0:22,0:22:66.22:0,66,922	0/0:31,0:31:93.30:0,93,1283	0/0:19,0:19:57.19:0,57,796	1/1:1,28:29:75.26:1199,75,0	1/1:0,14:14:36.12:576,36,0	1/1:1,27:28:30.28:1061,30,0	0/0:27,0:27:69.23:0,69,965	1/1:0,21:21:63.21:998,63,0	1/1:0,34:34:93.32:1486,93,0	0/0:24,0:24:72.24:0,72,1002	0/0:31,0:31:87.29:0,87,1217	0/0:24,0:24:72.23:0,72,989	0/0:25,0:25:72.23:0,72,990	1/1:0,16:16:45.15:720,45,0	0/1:2,25:27:2.05:1086,0,2	1/1:0,37:37:93.32:1486,93,0	1/1:0,10:10:24.08:384,24,0
chr10	7986132	.	A	ACAAACACACTAG	80145.91	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-4.957;DP=668;FS=1.305;HRun=0;HaplotypeScore=205.7279;InbreedingCoeff=0.9776;MQ=73.69;MQ0=0;MQRankSum=-10.372;QD=129.06;ReadPosRankSum=5.238;VQSLOD=5.3127;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:17,12:34:60.04:3502,60,0	1/1:3,5:11:21.07:1247,21,0	0/0:23,0:23:48.34:0,48,1672	0/0:24,0:24:65.94:0,66,1880	1/1:13,20:35:63.22:3412,63,0	1/1:8,8:16:39.13:2252,39,0	1/1:16,10:28:57.20:3267,57,0	1/1:25,5:33:93.32:4881,93,0	1/1:15,12:29:72.20:3797,72,0	1/1:10,14:27:81.26:4353,81,0	1/1:10,8:18:45.15:2592,45,0	1/1:10,15:25:63.22:3659,63,0	1/1:7,5:15:35.96:2078,36,0	1/1:10,11:23:51.18:2928,51,0	1/1:5,10:20:36.12:2188,36,0	1/1:13,11:28:75.26:4361,75,0	1/1:11,9:21:51.18:2686,51,0	1/1:2,3:5:12.04:642,12,0	1/1:17,4:24:54.19:2590,54,0	1/1:13,17:32:78.27:4486,78,0	1/1:14,4:24:27.56:1437,28,0	1/1:7,15:22:57.20:3333,57,0	1/1:5,15:21:48.16:2758,48,0	1/1:18,4:25:36.59:2096,37,0	1/1:18,10:28:69.24:3885,69,0	1/1:12,21:33:93.32:5163,93,0	1/1:15,16:37:96.30:5457,96,0	1/1:2,4:6:18.06:1096,18,0
chr10	7986905	.	AT	A	2521.65	PASS	AB=1.000;AC=18;AF=0.321;AN=56;BaseQRankSum=-0.668;DP=552;FS=6.393;HRun=11;HaplotypeScore=66.8169;InbreedingCoeff=0.8166;MQ=66.13;MQ0=2;MQRankSum=-0.371;QD=14.58;ReadPosRankSum=1.921;VQSLOD=4.1881;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:26:28.53:0,29,148	1/1:0,6:6:17.98:148,18,0	0/1:9,0:7:7.66:8,0,39	0/1:7,0:6:10.40:19,0,10	0/0:4,1:22:26.67:0,27,236	1/1:3,20:23:50.92:419,51,0	1/1:2,12:14:35.95:296,36,0	0/0:15,0:32:59.90:0,60,335	1/1:5,13:19:15.51:254,16,0	0/0:28,0:28:69.17:0,69,736	0/0:15,0:15:36.08:0,36,377	0/0:18,1:19:17.44:0,17,378	0/0:21,0:21:41.86:0,42,554	0/0:17,0:17:45.11:0,45,480	0/0:4,0:20:42.68:0,43,215	0/0:5,0:19:45.79:0,46,248	1/1:1,26:27:68.92:567,69,0	0/0:10,0:13:29.74:0,30,284	1/1:6,11:17:3.93:235,4,0	1/1:8,17:26:52.92:424,53,0	0/0:13,0:13:9.71:0,10,259	0/0:27,0:27:66.16:0,66,694	0/0:19,1:20:21.33:0,21,414	0/0:17,0:18:44.95:0,45,460	1/1:6,17:24:30.22:356,30,0	0/0:9,0:28:57.82:0,58,318	0/0:7,0:23:27.51:0,28,139	0/0:7,0:15:28.41:0,28,157
chr10	7987320	.	AGAGAGG	A	1630.54	PASS	AB=0.833;AC=16;AF=0.286;AN=56;BaseQRankSum=3.730;DP=348;FS=0.667;HRun=0;HaplotypeScore=75.5187;InbreedingCoeff=0.6648;MQ=73.41;MQ0=13;MQRankSum=-5.059;QD=16.31;ReadPosRankSum=0.979;VQSLOD=2.3123;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:33.03:0,33,527	1/1:0,1:1:3.01:37,3,0	0/1:31,0:11:23.85:24,0,96	0/0:47,0:25:47.57:0,48,761	0/0:20,0:20:36.39:0,36,1208	1/1:8,8:12:30.08:583,30,0	1/1:1,11:12:12.04:283,12,0	0/0:18,0:18:42.12:0,42,697	1/1:7,3:10:18.02:369,18,0	0/0:16,0:16:45.11:0,45,949	0/0:8,0:8:20.98:0,21,324	0/0:6,0:6:12.04:0,12,427	0/0:12,0:12:33.11:0,33,911	0/0:5,0:5:14.41:0,14,259	0/0:11,0:11:30.09:0,30,869	0/0:15,0:15:20.16:0,20,862	0/1:3,3:5:23.07:132,0,23	0/0:3,0:3:8.97:0,9,150	1/1:4,1:4:11.98:186,12,0	1/1:3,12:12:8.99:128,9,0	0/0:8,0:8:18.05:0,18,400	0/0:10,0:10:30.06:0,30,686	0/0:15,0:14:0.34:0,0,831	0/0:10,0:10:24.06:0,24,676	1/1:3,1:3:3.01:70,3,0	0/0:18,0:18:54.18:0,54,1312	0/0:11,0:11:30.10:0,30,869	0/0:2,0:2:6.02:0,6,116
chr10	7987367	.	A	AAG	1614.04	PASS	AB=0.811;AC=32;AF=0.615;AN=52;BaseQRankSum=-4.257;DP=373;FS=2.852;HRun=0;HaplotypeScore=80.5712;InbreedingCoeff=0.3986;MQ=52.65;MQ0=14;MQRankSum=-0.156;QD=6.53;ReadPosRankSum=-2.489;VQSLOD=2.4848;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:15:3:25,3,0	./.	./.	0/1:27,0:6:0:0,0,0	0/0:8,0:19:17.04:0,17,84	1/1:12,0:12:3:26,3,0	1/1:11,0:11:3.46:25,3,0	0/0:27,0:26:8.15:0,8,39	1/1:15,0:14:5.98:50,6,0	1/1:8,5:13:18.45:222,18,0	0/1:3,6:9:18.34:149,0,18	1/1:3,7:9:6.02:91,6,0	1/1:8,10:18:21.07:317,21,0	1/1:0,5:8:18.04:233,18,0	0/0:6,0:11:19.04:0,19,89	0/0:6,0:9:8.28:0,8,37	0/1:6,0:6:0:0,0,0	0/1:4,6:10:18.32:167,0,18	1/1:14,0:13:13.21:103,13,0	1/1:11,0:11:2.99:23,3,0	0/0:3,0:11:8.52:0,9,42	1/1:5,4:8:3.01:45,3,0	1/1:17,0:16:2.91:26,3,0	0/1:7,9:15:18.33:166,0,18	1/1:11,0:10:8.99:77,9,0	0/1:9,0:11:24.78:37,0,25	0/0:7,0:18:27.54:0,28,134	0/0:3,0:9:16.80:0,17,79
chr10	7987856	.	A	AATGTCC	3890.38	PASS	AC=22;AF=1.000;AN=22;DP=82;FS=0.000;HRun=0;HaplotypeScore=50.1987;InbreedingCoeff=-0.0888;MQ=20.40;MQ0=34;QD=63.78;VQSLOD=3.3522;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	1/1:3,9:9:27.09:962,27,0	./.	./.	./.	./.	1/1:1,5:4:12.04:436,12,0	1/1:4,4:4:12.04:438,12,0	./.	1/1:1,0:1:3.01:109,3,0	./.	./.	./.	./.	./.	./.	1/1:4,2:3:6.02:219,6,0	./.	1/1:4,3:7:18.06:646,18,0	1/1:0,4:2:6.02:219,6,0	1/1:1,0:1:3.01:108,3,0	./.	1/1:2,4:4:12.04:428,12,0	1/1:5,1:2:6.02:215,6,0	1/1:3,1:1:3.01:110,3,0
chr10	7987992	.	GGACATCCGGGA	G	9635.74	PASS	AC=40;AF=0.909;AN=44;BaseQRankSum=1.771;DP=131;FS=0.000;HRun=0;HaplotypeScore=117.4297;InbreedingCoeff=0.4251;MQ=59.63;MQ0=10;MQRankSum=-3.379;QD=90.90;ReadPosRankSum=2.958;VQSLOD=4.7729;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	1/1:0,3:1:3.01:112,3,0	0/0:10,0:3:5.75:0,6,30	0/0:13,0:4:5.68:0,6,39	1/1:0,9:9:27.09:849,27,0	1/1:0,4:4:9.03:335,9,0	./.	./.	./.	1/1:0,5:4:12.04:447,12,0	1/1:0,4:4:12.04:447,12,0	1/1:0,3:3:9.03:335,9,0	1/1:0,5:4:12.04:447,12,0	1/1:0,12:12:36.12:1341,36,0	1/1:0,8:7:21.07:781,21,0	1/1:0,4:3:9.03:335,9,0	1/1:0,1:1:3.01:112,3,0	1/1:0,1:1:3.01:112,3,0	./.	1/1:1,8:5:15.05:522,15,0	./.	1/1:0,5:5:15.05:558,15,0	1/1:0,2:2:6.02:223,6,0	1/1:0,1:1:3.01:112,3,0	1/1:0,7:2:6.02:223,6,0	1/1:0,12:11:33.11:1229,33,0	1/1:0,10:10:27.09:1005,27,0	1/1:0,1:1:3.01:112,3,0
chr10	7988159	.	C	CA	651.34	PASS	AC=12;AF=0.231;AN=52;BaseQRankSum=6.836;DP=540;FS=14.228;HRun=4;HaplotypeScore=53.7461;InbreedingCoeff=0.8883;MQ=43.57;MQ0=51;MQRankSum=-4.435;QD=13.29;ReadPosRankSum=0.056;VQSLOD=1.2507;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:27:57.14:0,57,634	./.	0/0:29,0:3:9.01:0,9,83	0/0:34,0:3:9.02:0,9,94	0/0:27,0:24:51.04:0,51,577	1/1:1,7:6:15.05:202,15,0	./.	0/0:30,0:15:27.08:0,27,306	1/1:1,8:5:9.03:123,9,0	0/0:34,0:29:84.21:0,84,938	0/0:23,0:21:54.15:0,54,611	0/0:13,0:12:33.09:0,33,373	0/0:20,0:20:42.11:0,42,476	0/0:28,0:27:75.21:0,75,848	0/0:32,0:31:78.22:0,78,883	0/0:17,0:17:48.14:0,48,544	1/1:2,10:5:6.02:82,6,0	0/0:13,0:12:33.09:0,33,374	1/1:3,1:2:3.01:41,3,0	1/1:2,5:7:15.05:205,15,0	0/0:27,0:26:60.14:0,60,668	0/0:29,0:26:66.17:0,66,737	0/0:25,0:22:66.19:0,66,748	0/0:14,0:14:30.09:0,30,340	1/1:2,7:4:12.04:164,12,0	0/0:30,0:28:84.24:0,84,951	0/0:25,0:24:63.18:0,63,713	0/0:9,0:7:21.06:0,21,238
chr10	7988515	.	T	TG	710.85	PASS	AB=0.887;AC=16;AF=0.286;AN=56;BaseQRankSum=10.046;DP=638;FS=37.125;HRun=0;HaplotypeScore=60.0821;InbreedingCoeff=0.3522;MQ=48.01;MQ0=12;MQRankSum=-10.008;QD=3.86;ReadPosRankSum=0.575;VQSLOD=1.5358;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:26:60.20:0,60,828	1/1:5,0:2:5.98:47,6,0	0/0:6,0:1:3:0,3,25	0/0:16,0:1:3.01:0,3,39	0/0:41,4:39:55.78:0,56,1270	1/1:21,1:20:14.99:157,15,0	0/1:9,0:7:34.35:34,0,83	0/0:39,0:20:57.19:0,57,797	1/1:11,0:7:5.97:45,6,0	0/1:27,6:29:99:104,0,931	0/0:26,1:24:51.10:0,51,677	0/0:20,0:20:57.19:0,57,797	0/0:27,1:28:27.09:0,27,958	0/0:19,0:18:51.17:0,51,707	0/0:22,0:22:66.22:0,66,923	0/1:21,4:25:85.95:86,0,806	0/1:11,0:9:25.79:59,0,26	0/0:23,0:22:63.21:0,63,878	1/1:16,0:12:17.90:133,18,0	1/1:7,0:5:2.99:23,3,0	0/0:33,0:33:90.28:0,90,1234	0/0:35,4:32:39.62:0,40,1126	0/0:29,5:27:81.26:0,81,1114	0/0:32,0:32:87.29:0,87,1216	0/1:4,2:3:11.86:64,0,12	0/0:26,3:24:72.22:0,72,974	0/1:33,6:38:99:131,0,1191	0/0:15,0:15:39.13:0,39,545
chr10	7989640	.	GC	G	374.36	PASS	AC=10;AF=0.294;AN=34;BaseQRankSum=3.274;DP=310;FS=3.117;HRun=1;HaplotypeScore=26.8714;InbreedingCoeff=0.6495;MQ=19.54;MQ0=100;MQRankSum=0.357;QD=9.36;ReadPosRankSum=0.690;VQSLOD=1.1262;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	1/1:0,7:6:11.55:167,12,0	./.	./.	0/0:20,0:14:17.98:0,18,255	./.	./.	./.	1/1:0,8:2:2.97:20,3,0	0/0:18,0:13:39.13:0,39,623	0/0:18,0:15:17.85:0,18,285	0/0:6,0:3:0:0,0,0	0/0:14,0:10:12.04:0,12,191	./.	./.	0/0:9,0:3:3.01:0,3,48	./.	./.	1/1:2,2:1:3.01:42,3,0	1/1:1,8:5:6.02:84,6,0	./.	0/0:21,0:13:15.05:0,15,239	0/0:15,0:9:17.98:0,18,254	0/0:5,0:2:3.01:0,3,48	1/1:0,12:9:15.01:187,15,0	0/0:14,0:9:27.09:0,27,421	0/0:12,0:4:6.02:0,6,95	0/0:2,0:1:3.01:0,3,48
chr10	7989947	.	A	AAGAAG	6752.56	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=9.565;DP=483;FS=124.622;HRun=0;HaplotypeScore=97.5073;InbreedingCoeff=0.9821;MQ=57.22;MQ0=4;MQRankSum=-11.993;QD=61.39;ReadPosRankSum=2.091;VQSLOD=1.6376;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:84.21:0,84,1596	1/1:0,8:9:21.07:633,21,0	0/0:14,0:12:30.05:0,30,519	0/0:4,0:4:9.03:0,9,149	0/0:19,0:18:54.11:0,54,947	1/1:1,6:7:12.04:362,12,0	1/1:0,10:11:27.09:812,27,0	0/0:26,0:24:66.21:0,66,1252	1/1:2,15:17:33.11:989,33,0	0/0:30,0:30:87.28:0,87,1634	0/0:19,0:19:51.17:0,51,916	0/0:17,0:17:48.16:0,48,982	0/0:20,0:20:57.16:0,57,1052	0/0:20,0:20:54.08:0,54,985	0/0:20,0:20:57.11:0,57,1069	0/0:18,0:17:48.16:0,48,972	1/1:0,7:8:18.06:524,18,0	0/0:10,0:10:24.08:0,24,476	1/1:0,13:14:42.08:1026,42,0	1/1:1,22:25:48.16:1322,48,0	0/0:17,0:17:45.14:0,45,906	0/0:26,0:24:66.22:0,66,1323	0/0:23,0:23:63.20:0,63,1219	0/0:18,0:18:54.19:0,54,1104	1/1:1,14:14:36.12:1085,36,0	0/0:15,0:15:42.12:0,42,780	0/0:19,0:19:51.14:0,51,982	0/0:9,0:9:24.08:0,24,510
chr10	7990881	.	GA	G	5352.35	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=16.857;DP=560;FS=1.606;HRun=3;HaplotypeScore=81.5516;InbreedingCoeff=0.9996;MQ=78.13;MQ0=0;MQRankSum=-3.182;QD=34.53;ReadPosRankSum=3.211;VQSLOD=5.4975;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:93.28:0,93,1300	1/1:0,11:11:33.10:409,33,0	0/0:18,0:17:48.16:0,48,675	0/0:12,0:12:32.90:0,33,437	0/0:27,0:27:81.27:0,81,1158	1/1:0,14:14:42.13:521,42,0	1/1:1,16:17:45.14:558,45,0	0/0:36,0:36:99:0,102,1466	1/1:0,18:18:54.17:669,54,0	0/0:27,0:27:81.26:0,81,1145	0/0:19,0:19:57.19:0,57,813	0/0:16,0:16:48.14:0,48,672	0/0:22,0:22:63.20:0,63,888	0/0:29,0:29:84.27:0,84,1191	0/0:20,0:20:57.19:0,57,817	0/0:19,0:19:57.18:0,57,796	1/1:2,29:31:81.25:1002,81,0	0/0:15,0:15:42.14:0,42,599	1/1:0,16:16:48.15:595,48,0	1/1:0,22:22:63.20:781,63,0	0/0:9,0:9:27.09:0,27,389	0/0:11,0:11:33.10:0,33,458	0/0:13,0:13:39.12:0,39,545	0/0:16,0:16:48.12:0,48,668	1/1:2,24:26:66.21:818,66,0	0/0:23,1:24:32.01:0,32,896	0/0:28,0:28:84.28:0,84,1208	0/0:13,0:13:39.09:0,39,518
chr10	7991379	.	CT	C	493.85	PASS	AB=0.983;AC=25;AF=0.595;AN=42;BaseQRankSum=0.239;DP=182;FS=8.450;HRun=3;HaplotypeScore=98.6923;InbreedingCoeff=0.2351;MQ=53.11;MQ0=4;MQRankSum=-2.279;QD=5.61;ReadPosRankSum=-0.217;VQSLOD=-0.1406;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,2:4:2.84:62,3,0	0/0:2,0:2:1:0,1,6	0/0:34,0:10:31:0,31,360	0/0:40,1:16:38.18:0,38,503	1/1:7,0:8:16.97:92,17,0	0/1:7,0:7:1.69:2,0,51	./.	./.	0/0:1,0:1:1.55:0,2,4	1/1:2,0:2:2.37:8,2,0	0/1:9,0:9:26.23:57,0,26	1/1:2,0:2:2.98:22,3,0	1/1:3,2:4:4.53:58,5,0	1/1:2,0:2:2.98:22,3,0	./.	./.	0/0:2,0:2:0.47:0,0,1	0/1:1,0:3:0.40:0,0,10	./.	0/1:13,0:15:20.18:20,0,43	./.	0/1:10,1:11:10.63:60,0,11	1/1:10,1:11:3.60:95,4,0	1/1:2,0:2:3:28,3,0	0/0:12,0:12:3.96:0,4,29	1/1:4,0:4:7.75:46,8,0	./.	1/1:3,0:3:8.79:52,9,0
chr10	7991380	.	T	TTTC	4098.75	PASS	AB=1.000;AC=37;AF=0.881;AN=42;BaseQRankSum=2.645;DP=185;FS=52.997;HRun=0;HaplotypeScore=90.3702;InbreedingCoeff=0.3918;MQ=52.77;MQ0=5;MQRankSum=-3.280;QD=38.31;ReadPosRankSum=4.353;VQSLOD=2.0093;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,0:4:4.75:89,5,0	1/1:2,0:2:5.68:38,6,0	0/0:34,0:10:32.42:0,32,427	0/0:41,0:16:38.10:0,38,534	1/1:2,6:8:21.07:481,21,0	0/1:7,0:7:14.99:126,0,15	./.	./.	1/1:1,0:1:2.92:17,3,0	1/1:0,2:2:3.01:71,3,0	1/1:6,3:9:18.01:397,18,0	1/1:1,0:1:3.01:60,3,0	1/1:4,2:5:9.03:169,9,0	1/1:2,0:2:3.01:61,3,0	./.	./.	1/1:2,0:2:5.77:33,6,0	1/1:2,1:3:4.26:74,4,0	./.	1/1:15,0:15:43.59:448,44,0	./.	1/1:3,9:12:33.11:728,33,0	1/1:3,8:11:33.07:646,33,0	1/1:2,1:2:3.48:60,3,0	1/1:12,0:12:34.88:256,35,0	1/1:2,2:4:9.03:171,9,0	./.	1/1:3,0:3:9.03:175,9,0
chr10	7991381	.	TCTC	T	1879.38	PASS	AB=0.703;AC=20;AF=0.476;AN=42;BaseQRankSum=2.424;DP=187;FS=10.829;HRun=0;HaplotypeScore=97.8657;InbreedingCoeff=0.4388;MQ=52.49;MQ0=5;MQRankSum=-2.272;QD=29.37;ReadPosRankSum=0.814;VQSLOD=3.3355;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:3,1:4:15.42:75,0,15	1/1:0,2:2:6.02:99,6,0	0/0:35,0:10:31.17:0,31,556	0/0:43,0:16:38.59:0,39,671	0/0:7,0:8:12.68:0,13,77	1/1:1,6:7:9.01:236,9,0	./.	./.	1/1:0,1:1:3.01:55,3,0	0/0:2,0:2:2.99:0,3,23	0/0:4,0:9:7.86:0,8,88	0/1:0,0:1:0:0,0,0	0/0:5,0:5:2.56:0,3,55	1/1:1,0:2:0.89:2,1,0	./.	./.	1/1:0,2:2:6.02:110,6,0	0/0:3,0:3:5.77:0,6,34	./.	1/1:2,13:15:45.15:724,45,0	./.	0/0:11,0:12:29.46:0,29,273	0/1:9,0:11:8.23:8,0,192	0/0:3,0:2:2.54:0,3,10	1/1:0,12:12:36.12:622,36,0	0/1:2,0:4:14.58:34,0,15	./.	1/1:0,0:3:8.89:60,9,0
chr10	7991390	.	CTT	C	41.05	PASS	AB=0.874;AC=10;AF=0.217;AN=46;BaseQRankSum=5.913;DP=212;FS=3.926;HRun=3;HaplotypeScore=104.2236;InbreedingCoeff=0.3041;MQ=49.48;MQ0=9;MQRankSum=-0.684;QD=0.87;ReadPosRankSum=3.940;VQSLOD=-0.2513;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:4,0:4:2.19:2,0,85	0/1:2,1:3:10.58:11,0,11	0/0:42,0:12:17.52:0,18,327	0/0:48,0:17:29.81:0,30,438	0/0:7,0:7:16.17:0,16,149	0/1:5,2:7:13.01:13,0,18	./.	./.	0/1:1,0:1:0:0,0,0	0/0:4,0:4:5.99:0,6,58	0/0:9,0:9:20.32:0,20,197	0/0:1,0:1:2.84:0,3,14	0/0:7,0:6:8.52:0,9,107	0/0:2,0:2:2.80:0,3,13	./.	./.	1/1:0,2:2:5.52:25,6,0	0/0:3,0:3:6.02:0,6,89	./.	0/1:9,6:15:2.93:34,0,3	0/0:2,0:2:0.47:0,0,1	0/0:15,0:15:36.50:0,37,491	0/0:14,0:13:21.62:0,22,362	0/0:3,0:2:2.97:0,3,20	1/1:7,5:12:14.17:74,14,0	0/0:3,0:3:5.47:0,5,30	0/0:1,0:1:3:0,3,29	0/1:3,0:3:0:0,0,0
chr10	7991394	.	C	CT	1891.52	PASS	AB=1.000;AC=37;AF=0.881;AN=42;BaseQRankSum=2.600;DP=209;FS=28.711;HRun=3;HaplotypeScore=96.1023;InbreedingCoeff=0.2865;MQ=52.28;MQ0=10;MQRankSum=-1.321;QD=12.20;ReadPosRankSum=2.741;VQSLOD=0.9942;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,2:5:14.64:126,15,0	1/1:1,0:3:2.38:16,2,0	0/1:44,0:10:13.26:13,0,148	0/0:49,0:16:14.60:0,15,225	1/1:3,6:9:20.90:178,21,0	1/1:2,0:5:14.85:104,15,0	./.	./.	1/1:1,0:1:2.88:15,3,0	1/1:1,4:5:8.99:100,9,0	1/1:4,4:8:15.50:152,15,0	1/1:1,0:1:3:27,3,0	1/1:3,5:6:6.02:69,6,0	1/1:2,0:2:3:27,3,0	./.	./.	1/1:0,0:2:5.67:29,6,0	1/1:2,1:3:3.01:39,3,0	./.	1/1:6,0:14:31.87:202,32,0	0/0:2,0:2:0.46:0,0,1	1/1:7,8:14:31.75:300,32,0	1/1:3,10:12:29.97:291,30,0	1/1:1,2:2:3:26,3,0	1/1:7,0:12:35.18:232,35,0	./.	1/1:1,1:2:5.98:54,6,0	./.
chr10	7991395	.	T	TC	1183.24	PASS	AB=0.917;AC=34;AF=0.773;AN=44;BaseQRankSum=3.823;DP=208;FS=30.030;HRun=1;HaplotypeScore=105.7427;InbreedingCoeff=0.4072;MQ=49.30;MQ0=10;MQRankSum=-1.261;QD=10.56;ReadPosRankSum=3.774;VQSLOD=0.1515;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,1:5:2.40:47,2,0	1/1:3,0:3:8.17:59,8,0	0/0:43,0:9:2.28:0,2,205	0/0:47,0:15:24.92:0,25,247	1/1:8,0:9:11.31:48,11,0	1/1:3,2:5:13.13:96,13,0	./.	./.	1/1:0,1:1:3:29,3,0	1/1:5,0:5:6.85:48,7,0	1/1:6,0:8:15.32:61,15,0	1/1:0,0:1:2.04:6,2,0	0/1:8,0:6:9.19:21,0,9	1/1:2,0:3:2.22:7,2,0	./.	0/0:1,0:1:2.68:0,3,11	1/1:2,0:2:6.01:62,6,0	1/1:3,0:3:2.94:18,3,0	./.	1/1:10,3:13:30.16:216,30,0	0/0:1,1:2:0.43:0,0,1	1/1:13,0:13:24.93:113,25,0	1/1:13,0:12:22.48:97,22,0	0/1:4,1:3:0.59:3,0,1	1/1:5,7:12:35.91:349,36,0	./.	1/1:2,0:2:5.29:23,5,0	./.
chr10	7991398	.	TC	T	940.79	PASS	AB=0.857;AC=36;AF=0.818;AN=44;BaseQRankSum=2.891;DP=211;FS=25.894;HRun=1;HaplotypeScore=95.3318;InbreedingCoeff=0.3835;MQ=43.09;MQ0=10;MQRankSum=-1.538;QD=8.11;ReadPosRankSum=3.512;VQSLOD=-0.4603;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,1:8:14.20:81,14,0	0/1:3,0:3:6.57:7,0,11	0/0:42,1:9:13.10:0,13,252	0/0:48,0:15:27.90:0,28,302	1/1:9,0:9:17.18:74,17,0	0/1:3,2:5:20:39,0,20	./.	./.	1/1:0,1:1:2.99:23,3,0	1/1:5,0:5:8.76:50,9,0	1/1:8,0:8:13.41:56,13,0	1/1:2,0:2:2.80:13,3,0	1/1:9,0:7:11.26:58,11,0	1/1:3,0:3:2.80:13,3,0	./.	1/1:1,0:1:2.98:21,3,0	1/1:2,0:2:5.97:44,6,0	1/1:3,0:3:2.86:16,3,0	./.	1/1:8,3:11:21.95:105,22,0	0/0:1,0:2:0.88:0,1,2	1/1:13,0:12:21.61:93,22,0	1/1:14,0:13:25.50:110,26,0	1/1:5,0:3:4.96:23,5,0	1/1:5,7:12:34.74:212,35,0	./.	1/1:2,0:2:5.70:31,6,0	./.
chr10	7991399	.	CT	C	1736.38	PASS	AB=0.670;AC=35;AF=0.795;AN=44;BaseQRankSum=1.832;DP=215;FS=31.480;HRun=2;HaplotypeScore=88.0421;InbreedingCoeff=0.2668;MQ=46.17;MQ0=10;MQRankSum=-1.894;QD=14.72;ReadPosRankSum=3.475;VQSLOD=1.7771;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,5:8:6.50:98,7,0	0/1:2,1:3:19.45:23,0,19	0/0:42,1:9:11.13:0,11,197	0/0:48,1:16:21.68:0,22,243	1/1:1,8:9:16.74:155,17,0	0/1:3,2:5:18.55:59,0,19	./.	./.	1/1:1,0:1:2.60:10,3,0	0/1:1,5:6:7.93:99,0,8	1/1:4,4:8:4.11:110,4,0	1/1:2,0:2:2.96:19,3,0	1/1:1,8:7:12.03:138,12,0	1/1:2,1:3:2.94:18,3,0	./.	1/1:0,1:1:3.01:39,3,0	1/1:0,2:2:5.98:47,6,0	1/1:2,1:3:5.98:54,6,0	./.	1/1:5,6:11:22.67:160,23,0	0/0:2,0:2:0.87:0,1,2	1/1:3,10:12:23.77:229,24,0	1/1:3,11:13:29.86:282,30,0	1/1:2,2:4:5.02:27,5,0	1/1:7,5:12:34.09:232,34,0	./.	1/1:0,2:2:6.01:68,6,0	./.
chr10	7991400	.	T	TC	1796.91	PASS	AB=0.971;AC=35;AF=0.761;AN=46;BaseQRankSum=1.569;DP=221;FS=17.874;HRun=1;HaplotypeScore=96.6479;InbreedingCoeff=0.1126;MQ=45.92;MQ0=9;MQRankSum=-0.952;QD=10.51;ReadPosRankSum=4.337;VQSLOD=0.3149;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,1:8:1.72:103,2,0	0/1:3,0:3:10.44:29,0,10	0/0:39,0:9:1.62:0,2,183	0/1:50,0:16:2.34:2,0,194	1/1:10,0:10:15.40:159,15,0	0/1:5,0:5:11.02:59,0,11	./.	./.	1/1:1,0:1:2.84:14,3,0	0/1:6,0:6:7.98:82,0,8	1/1:8,0:8:14.93:130,15,0	1/1:2,0:2:2.97:20,3,0	1/1:10,0:8:11.98:121,12,0	1/1:3,0:3:2.96:19,3,0	0/0:3,0:2:0.47:0,0,1	1/1:2,0:2:2.94:18,3,0	1/1:2,0:2:6.01:57,6,0	1/1:3,0:3:5.98:56,6,0	./.	1/1:11,0:11:16.83:165,17,0	0/0:1,1:2:0.84:0,1,2	1/1:12,1:12:23.77:238,24,0	1/1:14,0:13:29.88:282,30,0	0/1:5,1:4:0.89:18,0,1	1/1:12,0:12:34.55:290,35,0	./.	1/1:2,0:2:5.91:46,6,0	./.
chr10	7991410	.	CTT	C	657.89	PASS	AB=0.923;AC=25;AF=0.500;AN=50;BaseQRankSum=2.762;DP=241;FS=5.685;HRun=3;HaplotypeScore=95.5299;InbreedingCoeff=0.3479;MQ=43.07;MQ0=10;MQRankSum=-1.027;QD=4.09;ReadPosRankSum=0.742;VQSLOD=-0.4919;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:9,0:9:49.60:50,0,96	1/1:2,0:2:3.59:10,4,0	0/1:38,0:7:4.15:4,0,85	0/1:48,0:15:39.80:40,0,106	1/1:11,0:11:14.46:179,14,0	0/1:2,1:3:9.44:9,0,12	./.	./.	0/0:1,0:1:1.82:0,2,5	0/0:10,0:9:20.99:0,21,265	0/0:10,0:10:8.61:0,9,192	0/0:5,0:5:6.32:0,6,53	0/0:10,0:8:15.05:0,15,279	0/0:6,0:5:6.49:0,6,76	1/1:5,0:4:9.03:117,9,0	0/1:2,0:2:1.76:3,0,2	1/1:2,0:2:0.67:7,1,0	0/0:3,0:3:5.98:0,6,76	./.	1/1:5,2:7:9.75:63,10,0	1/1:3,0:3:6.02:76,6,0	0/0:13,0:12:24.51:0,25,419	0/0:20,0:18:35.81:0,36,537	1/1:10,0:7:2.74:12,3,0	0/1:6,4:10:1.35:117,0,1	1/1:7,0:6:9.45:91,9,0	0/1:2,0:2:0.70:1,0,47	1/1:1,0:1:3.01:36,3,0
chr10	7991422	.	C	CTT	1091.91	PASS	AB=0.928;AC=20;AF=0.400;AN=50;BaseQRankSum=-0.698;DP=234;FS=3.630;HRun=1;HaplotypeScore=91.3871;InbreedingCoeff=0.1210;MQ=47.64;MQ0=10;MQRankSum=-2.599;QD=7.33;ReadPosRankSum=-1.433;VQSLOD=-0.1408;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:9,0:9:36.77:37,0,77	1/1:1,1:2:0.65:53,1,0	0/1:30,0:7:19.81:20,0,68	0/1:46,0:16:25.23:25,0,97	1/1:4,6:10:24.08:389,24,0	0/0:2,0:2:4.15:0,4,19	./.	./.	0/0:1,0:1:2.90:0,3,16	0/1:11,0:10:11.92:12,0,271	0/0:7,0:7:10.59:0,11,140	0/0:4,0:4:6.02:0,6,77	0/0:11,0:9:15.05:0,15,221	0/0:8,0:7:6.02:0,6,92	1/1:1,4:4:9.03:162,9,0	1/1:0,2:2:6.02:115,6,0	0/0:1,0:1:2.60:0,3,10	0/0:3,0:3:3.01:0,3,46	./.	0/1:4,0:4:12.45:17,0,12	1/1:3,0:3:5.93:40,6,0	0/0:14,0:13:30.02:0,30,376	0/0:20,0:18:30.02:0,30,448	0/0:10,0:7:4.78:0,5,25	0/1:12,0:11:32.49:32,0,59	0/1:4,6:9:2.01:222,0,2	0/1:3,1:3:11.06:66,0,11	1/1:0,1:1:3.01:56,3,0
chr10	7991423	.	T	TTC	534.55	PASS	AB=0.969;AC=16;AF=0.320;AN=50;BaseQRankSum=-1.264;DP=234;FS=6.484;HRun=0;HaplotypeScore=94.7245;InbreedingCoeff=0.1815;MQ=47.67;MQ0=10;MQRankSum=-0.550;QD=5.29;ReadPosRankSum=0.672;VQSLOD=2.4411;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:8,1:9:24.57:25,0,91	0/1:2,0:2:16.90:31,0,17	0/0:31,0:7:14.46:0,14,140	0/1:44,0:15:9.05:9,0,140	1/1:10,0:10:23.85:234,24,0	0/0:2,0:2:5.99:0,6,57	./.	./.	0/0:1,0:1:3:0,3,25	0/1:10,1:10:33.82:34,0,350	0/0:7,0:7:10.59:0,11,151	0/0:4,0:4:6.02:0,6,96	0/0:12,0:10:15.05:0,15,243	0/0:8,0:7:6.02:0,6,98	1/1:4,1:4:9.02:103,9,0	1/1:2,0:2:6.02:70,6,0	0/0:1,0:1:3:0,3,29	0/0:3,0:3:3.01:0,3,49	./.	0/0:4,0:4:9.77:0,10,72	1/1:3,0:3:1.77:4,2,0	0/0:14,0:13:30.10:0,30,470	0/0:20,0:18:30.03:0,30,488	0/0:7,3:7:1.77:0,2,11	0/0:12,0:11:8.49:0,8,200	0/1:10,0:9:30.69:110,0,31	0/1:4,0:3:29.09:29,0,54	1/1:1,0:1:3.01:35,3,0
chr10	7991474	.	C	CTCTT	6656.88	PASS	AB=0.667;AC=35;AF=0.673;AN=52;BaseQRankSum=-3.064;DP=319;FS=3.711;HRun=0;HaplotypeScore=87.0149;InbreedingCoeff=0.6885;MQ=41.03;MQ0=11;MQRankSum=0.155;QD=32.47;ReadPosRankSum=2.620;VQSLOD=4.9181;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:7.21:0,7,317	0/0:3,0:3:5.86:0,6,38	0/0:35,0:10:13.85:0,14,175	0/0:36,0:8:13.44:0,13,114	1/1:9,2:11:22.98:308,23,0	0/0:7,0:4:1.31:0,1,25	1/1:3,0:2:5.95:43,6,0	1/1:18,0:7:8.96:70,9,0	./.	1/1:15,6:21:42.35:985,42,0	1/1:5,11:16:16.02:598,16,0	1/1:6,2:8:15.05:362,15,0	1/1:12,2:13:30.06:577,30,0	1/1:11,1:11:21.03:457,21,0	1/1:9,1:9:23.97:311,24,0	1/1:5,2:7:20.93:350,21,0	0/0:5,0:5:2.32:0,2,26	1/1:4,1:5:9.03:206,9,0	0/0:0,0:1:3:0,3,28	1/1:1,0:1:3:28,3,0	./.	1/1:10,5:14:33.05:756,33,0	1/1:6,18:24:32.81:520,33,0	0/1:8,8:13:2.21:208,0,2	0/0:6,0:5:10.37:0,10,59	1/1:6,3:8:20.99:340,21,0	1/1:8,3:10:30.03:463,30,0	1/1:3,1:3:3.01:74,3,0
chr10	7991497	.	TTC	T	1096.98	PASS	AB=0.881;AC=24;AF=0.444;AN=54;BaseQRankSum=5.258;DP=301;FS=45.672;HRun=0;HaplotypeScore=115.7671;InbreedingCoeff=0.1056;MQ=33.44;MQ0=5;MQRankSum=-3.067;QD=6.81;ReadPosRankSum=0.876;VQSLOD=1.3035;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:5.06:0,5,339	1/1:3,0:3:4.77:28,5,0	0/0:16,1:4:12.04:0,12,229	0/0:28,0:5:5.31:0,5,29	1/1:9,1:9:9.44:183,9,0	0/1:11,2:10:8.24:155,0,8	0/1:8,0:5:11.79:12,0,16	0/0:10,0:5:8.96:0,9,97	1/1:4,1:3:6:55,6,0	0/1:21,1:22:50.74:51,0,264	0/1:15,3:18:91.42:91,0,134	0/1:11,0:11:9.08:9,0,81	0/1:11,0:11:20.01:20,0,134	0/0:13,0:12:1.91:0,2,43	1/1:6,0:6:9.27:103,9,0	1/1:8,0:8:5.27:103,5,0	0/1:3,2:5:8.61:59,0,9	0/1:5,1:5:25.17:25,0,45	0/0:3,0:3:3.01:0,3,50	0/1:3,3:5:6.09:6,0,30	./.	0/0:15,0:15:20.64:0,21,265	0/0:22,0:22:17.49:0,17,275	0/0:15,0:14:11.86:0,12,133	0/1:7,1:7:2.68:51,0,3	1/1:9,1:10:2.95:124,3,0	1/1:11,0:10:15.24:185,15,0	0/0:2,0:2:0.89:0,1,2
chr10	7991499	.	CCTT	C	565.60	PASS	AB=0.800;AC=15;AF=0.278;AN=54;BaseQRankSum=4.498;DP=301;FS=37.390;HRun=0;HaplotypeScore=122.7757;InbreedingCoeff=0.2037;MQ=32.32;MQ0=7;MQRankSum=-2.028;QD=6.02;ReadPosRankSum=1.384;VQSLOD=1.4132;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:21.54:0,22,397	0/1:2,1:3:9.84:21,0,10	0/0:18,0:4:12.04:0,12,166	0/0:30,0:6:8.60:0,9,68	0/1:6,3:9:8.87:30,0,9	0/1:10,4:11:41.94:102,0,42	0/1:7,1:5:13.76:14,0,20	0/0:6,0:5:8.10:0,8,62	1/1:4,1:3:5.52:25,6,0	0/0:20,2:22:35.64:0,36,520	0/0:17,0:17:33.32:0,33,524	0/0:9,1:10:16.54:0,17,227	0/0:9,2:12:23.19:0,23,318	0/0:9,2:11:16.95:0,17,173	0/1:2,4:6:3.77:103,0,4	0/1:2,3:7:0.20:76,0,0	0/1:5,0:5:12.98:28,0,13	0/0:6,0:5:8.27:0,8,146	0/0:3,0:3:8.99:0,9,100	0/1:6,0:5:2.35:2,0,48	./.	0/0:14,2:16:34.58:0,35,498	0/0:21,0:21:25.09:0,25,490	0/0:16,0:14:14.84:0,15,219	0/1:7,1:7:22.83:28,0,23	1/1:5,2:11:5.79:92,6,0	1/1:3,6:10:9.93:198,10,0	0/0:2,0:2:2.68:0,3,11
chr10	7991538	.	CTCTT	C	3438.35	PASS	AB=0.725;AC=25;AF=0.463;AN=54;BaseQRankSum=-3.963;DP=310;FS=6.725;HRun=0;HaplotypeScore=111.0835;InbreedingCoeff=0.4866;MQ=33.45;MQ0=23;MQRankSum=1.823;QD=19.43;ReadPosRankSum=0.615;VQSLOD=2.8973;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:17.97:0,18,298	0/0:4,0:4:3.01:0,3,36	0/0:27,0:5:12:0,12,203	0/0:28,0:4:9.02:0,9,145	0/1:10,7:17:64.52:409,0,65	0/0:15,0:14:21.53:0,22,135	0/0:6,0:3:2.04:0,2,6	1/1:14,0:6:5.21:72,5,0	0/0:6,0:6:2.74:0,3,34	0/1:7,5:11:3.44:295,0,3	0/1:11,6:16:12.41:368,0,12	1/1:8,4:11:21.05:320,21,0	1/1:10,2:11:12.31:216,12,0	1/1:5,3:7:12.04:198,12,0	1/1:4,4:7:18.06:297,18,0	1/1:2,4:6:12.04:200,12,0	0/0:4,0:4:5.69:0,6,43	1/1:5,1:6:9.03:125,9,0	0/0:6,0:5:8.95:0,9,89	0/0:10,0:9:10.41:0,10,93	0/0:6,0:6:9.03:0,9,216	1/1:8,0:8:4.71:45,5,0	1/1:12,2:14:11.89:130,12,0	0/1:11,2:11:4.89:90,0,5	0/0:8,0:8:9.07:0,9,69	0/1:6,7:12:7.29:324,0,7	1/1:5,11:15:21.07:349,21,0	./.
chr10	7991558	.	TTCTCTCTCCCTC	T	1306.64	PASS	AB=0.917;AC=11;AF=0.204;AN=54;BaseQRankSum=5.677;DP=313;FS=8.947;HRun=0;HaplotypeScore=135.5302;InbreedingCoeff=0.5282;MQ=34.80;MQ0=15;MQRankSum=-2.082;QD=24.20;ReadPosRankSum=-1.801;VQSLOD=1.3258;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:21.36:0,21,953	0/0:1,0:1:3.01:0,3,31	0/0:23,0:8:24.08:0,24,562	0/0:28,0:8:14.99:0,15,401	0/0:15,0:15:36.12:0,36,981	1/1:10,2:11:2.53:297,3,0	./.	0/0:18,0:11:29.84:0,30,809	1/1:6,0:6:17.92:271,18,0	0/0:18,0:17:8.26:0,8,1104	0/0:23,0:22:42.02:0,42,1149	0/0:12,0:11:20.43:0,20,432	0/1:12,0:10:0.55:1,0,361	0/0:14,0:13:8.01:0,8,458	0/0:8,0:7:18.04:0,18,408	0/0:5,0:5:15.05:0,15,354	1/1:6,0:6:11.07:241,11,0	0/0:7,0:7:12.04:0,12,341	1/1:3,0:2:5.66:32,6,0	0/1:6,3:9:1.90:428,0,2	0/0:7,0:7:12.04:0,12,421	0/0:6,0:5:7.20:0,7,139	0/0:12,0:12:12.75:0,13,333	0/0:15,0:12:3.86:0,4,97	0/1:6,0:6:11.86:182,0,12	0/0:15,0:13:30.10:0,30,754	0/0:13,0:12:16.95:0,17,538	0/0:2,0:2:2.92:0,3,17
chr10	7991563	.	TCTCCCTC	T	541.41	PASS	AB=0.854;AC=6;AF=0.111;AN=54;BaseQRankSum=5.473;DP=322;FS=4.890;HRun=0;HaplotypeScore=122.4764;InbreedingCoeff=0.1040;MQ=35.14;MQ0=15;MQRankSum=-1.384;QD=15.92;ReadPosRankSum=-2.188;VQSLOD=2.3795;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:20.34:0,20,920	0/0:1,0:1:3.01:0,3,88	0/0:22,0:8:24.08:0,24,845	0/0:28,0:8:20.35:0,20,532	0/0:16,0:16:21.84:0,22,880	0/1:10,0:10:73.88:83,0,74	./.	0/0:17,0:11:33.11:0,33,1044	1/1:3,3:6:8.61:197,9,0	0/0:18,0:16:38.06:0,38,1101	0/0:23,0:22:41.17:0,41,1022	0/0:13,0:12:21.07:0,21,377	0/0:13,0:11:19.31:0,19,342	0/0:15,0:14:17.06:0,17,472	0/0:11,0:10:2.14:0,2,316	0/0:5,0:5:15.05:0,15,317	0/1:3,1:4:23.96:98,0,24	0/0:7,0:7:12.04:0,12,307	0/0:4,0:3:5.94:0,6,52	0/1:8,0:9:66:154,0,66	0/0:7,0:7:12.04:0,12,470	0/0:9,0:8:6.60:0,7,222	0/0:13,0:13:20.85:0,21,481	0/0:15,0:12:8.71:0,9,130	0/1:3,2:5:72.82:132,0,73	0/0:17,0:15:36.12:0,36,892	0/0:15,0:13:23.97:0,24,504	0/0:2,0:2:2.99:0,3,24
chr10	7991578	.	T	TTC	457.98	PASS	AB=0.972;AC=29;AF=0.604;AN=48;BaseQRankSum=-5.083;DP=393;FS=1.795;HRun=0;HaplotypeScore=123.8237;InbreedingCoeff=0.4586;MQ=35.29;MQ0=20;MQRankSum=0.682;QD=1.65;ReadPosRankSum=-1.082;VQSLOD=2.5127;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:18:4.63:167,5,0	./.	./.	./.	1/1:23,0:23:5.23:43,5,0	0/0:12,0:11:5.97:0,6,52	0/0:2,0:1:3.01:0,3,33	1/1:25,0:17:0.45:1,0,0	0/0:11,0:10:24.04:0,24,240	1/1:20,0:19:4.88:47,5,0	0/1:30,0:30:0.63:1,0,23	1/1:14,0:14:8.89:64,9,0	0/0:15,0:13:0.81:0,1,1	0/1:17,0:17:10.53:16,0,11	1/1:12,0:12:11.13:70,11,0	1/1:7,0:7:0.47:1,0,0	0/0:4,0:4:9.02:0,9,98	1/1:11,0:10:2.50:21,2,0	0/0:4,0:4:3.01:0,3,33	0/0:11,0:11:18.01:0,18,182	1/1:6,5:11:2.60:44,3,0	1/1:12,0:11:5.86:45,6,0	0/1:12,0:12:0:0,0,0	1/1:19,0:16:0.47:1,0,0	0/0:8,0:8:11.99:0,12,113	1/1:21,0:18:8.26:72,8,0	1/1:20,0:18:0.94:3,1,0	./.
chr10	7991921	.	GTT	G	1888.79	PASS	AB=0.621;AC=17;AF=0.304;AN=56;BaseQRankSum=8.543;DP=441;FS=0.483;HRun=11;HaplotypeScore=64.9680;InbreedingCoeff=0.8823;MQ=70.73;MQ0=1;MQRankSum=-6.536;QD=18.70;ReadPosRankSum=-1.314;VQSLOD=2.2813;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:28:64.24:0,64,1031	1/1:0,8:8:21.05:222,21,0	0/0:21,0:16:15.92:0,16,184	0/0:24,0:16:3.97:0,4,100	0/0:20,0:20:52.98:0,53,759	1/1:2,5:7:20.08:196,20,0	1/1:4,6:10:21.04:223,21,0	0/0:16,0:17:36.10:0,36,513	1/1:2,9:11:30.07:319,30,0	0/0:13,0:13:36.10:0,36,515	0/0:13,0:14:33.06:0,33,474	0/0:18,0:18:51.17:0,51,777	0/0:19,0:19:51.10:0,51,679	0/0:13,0:14:32.48:0,32,380	0/0:18,0:18:39.13:0,39,600	0/0:15,0:15:42.14:0,42,646	1/1:3,10:13:33.08:350,33,0	0/0:8,0:9:23.57:0,24,332	1/1:3,8:10:18.03:192,18,0	1/1:4,10:14:30.06:317,30,0	0/1:7,2:18:85.13:86,0,85	0/0:17,0:17:36.12:0,36,554	0/0:15,0:15:37.89:0,38,509	0/0:17,0:17:45.14:0,45,673	1/1:3,6:9:18.04:191,18,0	0/0:21,0:21:57.15:0,57,833	0/0:31,0:32:84.20:0,84,1182	0/0:5,0:5:15.02:0,15,206
chr10	7991941	.	T	TG	2137.19	PASS	AB=0.619;AC=15;AF=0.268;AN=56;BaseQRankSum=2.763;DP=477;FS=0.490;HRun=8;HaplotypeScore=65.1656;InbreedingCoeff=0.9089;MQ=68.96;MQ0=1;MQRankSum=-5.883;QD=20.35;ReadPosRankSum=-0.512;VQSLOD=3.4514;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:56.99:0,57,517	1/1:1,6:7:18.05:208,18,0	0/0:24,0:17:31.66:0,32,267	0/0:26,0:16:22.19:0,22,184	0/0:22,0:22:54.03:0,54,494	1/1:1,8:9:24.07:277,24,0	1/1:3,6:9:12.04:138,12,0	0/0:22,0:22:53.98:0,54,487	1/1:3,12:16:39.01:432,39,0	0/0:10,0:11:20.04:0,20,171	0/0:22,0:23:56.04:0,56,492	0/0:19,0:19:44.99:0,45,405	0/0:11,0:11:33.02:0,33,302	0/0:10,0:10:24:0,24,218	0/0:21,0:21:54.01:0,54,489	0/0:19,0:19:32.99:0,33,298	1/1:6,10:16:2.63:284,3,0	0/0:11,0:11:17.99:0,18,164	0/1:5,7:13:0.51:230,0,1	1/1:6,14:20:33.10:380,33,0	0/0:19,0:19:41.92:0,42,377	0/0:13,0:13:30:0,30,272	0/0:16,0:16:35.94:0,36,316	0/0:16,0:16:45.02:0,45,412	1/1:1,14:15:33.10:381,33,0	0/0:25,0:25:53.04:0,53,472	0/0:26,0:26:51.01:0,51,466	0/0:12,0:12:24.01:0,24,220
chr10	7993079	.	C	CA	6607.54	PASS	AC=20;AF=0.370;AN=54;BaseQRankSum=-10.423;DP=518;FS=2.059;HRun=5;HaplotypeScore=52.4627;InbreedingCoeff=0.9977;MQ=85.14;MQ0=0;MQRankSum=-3.174;QD=33.54;ReadPosRankSum=1.619;VQSLOD=5.3362;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,25:26:72.23:947,72,0	0/0:6,0:6:18.05:0,18,193	0/0:25,0:25:69.16:0,69,727	0/0:11,0:11:24.05:0,24,253	0/0:18,0:18:54.14:0,54,580	0/0:21,0:21:57.14:0,57,612	0/0:10,0:10:24.06:0,24,258	0/0:21,0:21:48.12:0,48,516	0/0:18,0:18:51.13:0,51,548	1/1:5,25:30:72.22:933,72,0	1/1:1,16:17:45.10:573,45,0	1/1:1,13:14:33.10:426,33,0	1/1:0,22:22:66.21:867,66,0	1/1:1,23:24:63.20:829,63,0	0/0:22,0:22:63.16:0,63,677	0/0:13,0:13:36.08:0,36,379	0/0:31,0:31:90.21:0,90,959	1/1:0,9:9:24.08:316,24,0	0/0:16,0:16:42.11:0,42,451	0/0:26,0:26:48.10:0,48,515	0/0:12,0:12:33.08:0,33,354	1/1:2,13:15:30.05:375,30,0	1/1:0,21:21:54.18:710,54,0	1/1:2,17:19:48.16:632,48,0	0/0:22,0:22:48.10:0,48,509	0/0:24,0:24:60.15:0,60,645	0/0:25,0:25:66.16:0,66,709	./.
chr10	7993519	.	CT	C	724.52	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=14.510;DP=567;FS=7.924;HRun=7;HaplotypeScore=106.7499;InbreedingCoeff=0.8853;MQ=78.14;MQ0=0;MQRankSum=-1.501;QD=4.61;ReadPosRankSum=2.128;VQSLOD=0.1672;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:43.65:0,44,259	0/0:4,0:4:12.04:0,12,151	0/0:37,0:27:47.49:0,47,540	0/0:40,0:34:39.88:0,40,587	0/0:26,0:26:69.20:0,69,837	0/0:24,0:24:72.22:0,72,893	0/0:15,0:15:36.11:0,36,441	0/0:30,0:30:73.10:0,73,887	0/0:19,0:19:51.16:0,51,642	1/1:17,0:17:24.74:167,25,0	0/1:19,0:19:3.79:65,0,4	1/1:16,0:16:24.87:90,25,0	1/1:11,1:12:22.01:92,22,0	1/1:17,2:19:7.58:140,8,0	0/0:11,0:11:33.11:0,33,415	0/0:20,0:20:57.16:0,57,694	0/0:31,0:31:90.26:0,90,1105	1/1:16,1:17:14.92:131,15,0	0/0:16,0:16:45.14:0,45,566	0/0:29,0:29:78.24:0,78,968	0/0:9,0:9:24.06:0,24,289	1/1:12,1:13:7.76:78,8,0	1/1:21,0:22:5.47:70,5,0	1/1:22,0:22:16.49:89,16,0	0/0:15,0:15:42.13:0,42,528	0/0:27,0:27:72.22:0,72,896	0/0:15,0:14:42.09:0,42,499	0/0:24,0:24:60.18:0,60,739
chr10	7993691	.	CA	C	5329.11	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=15.230;DP=597;FS=1.055;HRun=8;HaplotypeScore=57.7822;InbreedingCoeff=0.9618;MQ=74.39;MQ0=0;MQRankSum=-0.836;QD=24.22;ReadPosRankSum=3.681;VQSLOD=5.5042;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,15:17:45.07:434,45,0	0/0:8,0:8:18.06:0,18,217	0/0:12,0:12:17.96:0,18,185	0/0:12,0:12:2.23:0,2,109	0/0:37,0:37:99:0,108,1292	0/0:26,0:26:66.20:0,66,797	0/0:22,0:22:63.17:0,63,738	0/0:28,0:28:75.23:0,75,906	0/0:20,0:20:48.15:0,48,580	1/1:4,26:30:78.12:753,78,0	1/1:1,29:30:75.11:724,75,0	1/1:1,12:13:36.06:348,36,0	1/1:1,21:22:57.09:550,57,0	1/1:4,20:24:63.09:607,63,0	0/0:23,2:25:40.22:0,40,758	0/0:19,0:19:54.16:0,54,643	0/0:17,0:17:45.13:0,45,532	1/1:2,10:12:30.05:290,30,0	0/0:16,0:16:48.15:0,48,580	0/0:26,0:26:75.22:0,75,894	0/0:16,0:16:48.15:0,48,580	1/1:3,20:23:57.09:550,57,0	1/1:7,20:27:57.09:550,57,0	1/1:3,18:21:54.08:522,54,0	0/0:13,0:13:36.11:0,36,435	0/0:26,0:26:72.22:0,72,866	0/0:41,0:40:99:0,114,1340	0/0:12,1:13:10.10:0,10,368
chr10	7994344	.	C	CT	30.88	PASS	AB=0.902;AC=10;AF=0.179;AN=56;BaseQRankSum=7.098;DP=273;FS=13.170;HRun=0;HaplotypeScore=116.3982;InbreedingCoeff=-0.2028;MQ=49.85;MQ0=2;MQRankSum=-3.875;QD=0.33;ReadPosRankSum=0.291;VQSLOD=1.5327;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:8:13.29:0,13,170	0/1:2,0:2:8.47:8,0,36	0/0:7,0:3:1.93:0,2,39	0/0:12,0:6:0.76:0,1,4	0/0:9,1:10:7.14:0,7,116	0/1:4,3:7:44.88:45,0,51	0/0:7,0:7:21.07:0,21,293	0/0:8,0:7:11.92:0,12,167	0/0:13,0:13:28.09:0,28,369	0/1:16,0:16:14.97:15,0,345	0/0:9,0:9:13:0,13,160	0/0:10,4:14:21.33:0,21,347	0/0:14,1:15:36.05:0,36,473	0/0:16,1:17:39.80:0,40,510	0/1:7,3:9:10.35:10,0,102	0/1:10,1:10:4.82:5,0,278	0/0:4,1:4:12:0,12,145	0/0:7,0:7:18.06:0,18,251	0/1:3,0:2:19.03:19,0,36	0/0:10,2:12:17.41:0,17,262	0/0:10,0:10:14.65:0,15,184	0/0:8,1:9:17.63:0,18,219	0/1:9,3:12:14.88:15,0,119	0/0:8,0:8:6.84:0,7,176	0/1:19,0:19:22.45:22,0,312	0/1:9,0:9:17.76:18,0,215	0/0:6,2:7:17.30:0,17,162	0/1:4,1:5:6.49:6,0,79
chr10	7996907	.	C	CA	120.30	PASS	AB=0.834;AC=7;AF=0.125;AN=56;BaseQRankSum=3.142;DP=443;FS=1.528;HRun=0;HaplotypeScore=296.7482;InbreedingCoeff=-0.1824;MQ=47.56;MQ0=0;MQRankSum=-1.861;QD=1.03;ReadPosRankSum=1.414;VQSLOD=2.2684;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:33.61:0,34,380	0/1:6,3:9:21.87:22,0,152	0/0:10,0:7:17.97:0,18,196	0/0:8,0:7:5.11:0,5,110	0/0:16,4:20:11.44:0,11,172	0/0:10,1:11:0.79:0,1,254	0/0:6,1:7:9.33:0,9,125	0/1:11,1:12:35.58:36,0,206	0/0:15,3:18:35.73:0,36,440	0/0:28,0:28:15.99:0,16,554	0/0:22,0:22:23.91:0,24,223	0/0:13,0:13:22.54:0,23,331	0/0:15,0:15:34.41:0,34,432	0/0:11,0:11:17.44:0,17,178	0/0:14,3:17:19.55:0,20,202	0/1:13,4:17:47.34:47,0,255	0/0:12,1:13:3.43:0,3,199	0/0:9,0:9:17.65:0,18,215	0/0:7,1:8:12.31:0,12,157	0/0:28,2:30:42:0,42,636	0/0:4,0:4:6.02:0,6,84	0/0:24,0:24:23.08:0,23,347	0/0:26,0:26:44.11:0,44,567	0/0:16,0:16:7.11:0,7,126	0/1:21,6:27:38.57:39,0,264	0/1:20,4:24:60.51:61,0,448	0/1:16,5:21:30.74:31,0,444	0/1:6,1:7:12.90:13,0,114
chr10	7996926	.	T	TTC	1098.28	PASS	AB=0.864;AC=14;AF=0.250;AN=56;BaseQRankSum=8.798;DP=501;FS=53.765;HRun=0;HaplotypeScore=306.5403;InbreedingCoeff=-0.3597;MQ=49.64;MQ0=0;MQRankSum=-8.070;QD=4.22;ReadPosRankSum=5.640;VQSLOD=1.1541;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:44.97:0,45,565	0/1:7,4:12:99:168,0,200	0/0:16,0:12:33.10:0,33,483	0/0:10,0:9:9.30:0,9,283	0/0:16,4:22:7.81:0,8,336	0/1:11,1:13:37.97:38,0,250	0/0:8,1:9:14.40:0,14,203	0/1:11,1:13:20.86:21,0,338	0/1:19,3:22:60.19:60,0,674	0/1:24,5:29:99:213,0,621	0/0:22,1:23:0.84:0,1,409	0/1:9,2:11:0.54:1,0,312	0/1:15,2:17:22.59:23,0,627	0/0:11,2:13:6.41:0,6,389	0/0:13,3:16:31.18:0,31,502	0/1:12,4:16:99:128,0,417	0/0:15,1:16:9.07:0,9,453	0/1:10,1:11:20.54:21,0,345	0/1:9,1:10:62.85:63,0,227	0/0:31,2:37:12.37:0,12,753	0/0:8,0:8:18.04:0,18,253	0/1:19,4:23:18.97:19,0,291	0/0:23,3:26:21.76:0,22,638	0/0:18,0:18:14.95:0,15,218	0/1:24,6:33:99:214,0,615	0/1:20,4:28:94.30:94,0,669	0/1:15,5:22:99:185,0,483	0/0:9,0:9:6.61:0,7,176
chr10	7996947	.	CT	C	4346.75	PASS	AB=0.650;AC=50;AF=0.893;AN=56;BaseQRankSum=-3.308;DP=469;FS=29.868;HRun=1;HaplotypeScore=223.2169;InbreedingCoeff=0.4366;MQ=54.68;MQ0=0;MQRankSum=-1.292;QD=9.75;ReadPosRankSum=4.713;VQSLOD=0.5079;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,20:22:49:316,49,0	1/1:4,5:9:10.37:54,10,0	0/0:14,0:13:18.90:0,19,112	0/0:9,0:9:4.84:0,5,63	1/1:6,16:22:39.35:238,39,0	1/1:1,17:18:37.52:229,38,0	1/1:0,10:10:23.50:147,23,0	0/1:5,10:15:37.32:75,0,37	1/1:4,17:21:46.94:293,47,0	0/1:12,9:21:73.17:73,0,86	1/1:4,13:17:34.13:200,34,0	1/1:3,6:9:16.81:109,17,0	1/1:4,12:16:20.09:183,20,0	1/1:4,9:13:26.17:164,26,0	1/1:2,16:18:40.45:235,40,0	1/1:6,12:18:31.15:195,31,0	1/1:1,20:21:37.29:222,37,0	1/1:2,9:11:4.38:100,4,0	1/1:1,5:6:10.03:52,10,0	1/1:7,19:26:45.83:260,46,0	1/1:0,12:12:18.96:86,19,0	1/1:11,9:20:19.34:108,19,0	1/1:8,13:21:32.74:205,33,0	1/1:4,11:15:19.46:133,19,0	1/1:10,19:29:35.01:255,35,0	1/1:5,22:27:5.22:236,5,0	1/1:8,11:19:2.57:108,3,0	1/1:1,9:10:14.23:73,14,0
chr10	7997007	.	GA	G	4788.51	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=8.179;DP=512;FS=2.155;HRun=2;HaplotypeScore=106.3944;InbreedingCoeff=0.9993;MQ=71.83;MQ0=0;MQRankSum=-4.802;QD=32.35;ReadPosRankSum=2.480;VQSLOD=4.6658;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:75.24:0,75,1082	0/0:9,0:9:27.06:0,27,381	0/0:19,0:19:54.16:0,54,785	0/0:12,0:12:27.09:0,27,392	0/0:15,0:15:45.15:0,45,674	0/0:24,0:24:72.24:0,72,1077	0/0:11,0:11:33.11:0,33,494	0/0:24,0:24:72.24:0,72,1079	0/0:27,0:27:78.19:0,78,1110	1/1:1,16:17:48.15:595,48,0	1/1:4,14:18:42.09:503,42,0	1/1:0,15:15:45.14:557,45,0	1/1:1,20:21:60.12:711,60,0	1/1:3,10:13:33.03:375,33,0	0/0:18,0:18:48.16:0,48,718	0/0:12,0:12:36.09:0,36,505	0/0:33,0:33:96.27:0,96,1377	1/1:2,11:13:36.09:431,36,0	0/0:14,0:14:42.14:0,42,629	0/0:26,0:26:72.20:0,72,1044	0/0:18,0:18:48.14:0,48,697	1/1:0,23:23:60.19:743,60,0	1/1:0,11:11:30.09:372,30,0	1/1:2,15:17:42.09:502,42,0	0/0:19,0:19:51.17:0,51,764	0/0:22,1:23:29.06:0,29,870	0/0:20,0:20:60.16:0,60,874	0/0:10,0:10:30.10:0,30,450
chr10	7997298	.	T	TA	3862.24	PASS	AB=0.712;AC=14;AF=0.250;AN=56;BaseQRankSum=-10.743;DP=618;FS=2.622;HRun=10;HaplotypeScore=77.3109;InbreedingCoeff=0.6427;MQ=71.04;MQ0=0;MQRankSum=-0.257;QD=18.39;ReadPosRankSum=-1.216;VQSLOD=3.9235;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:96:0,96,808	0/1:4,7:11:3.56:171,0,4	0/0:19,0:16:12.10:0,12,260	0/0:11,0:12:19.33:0,19,150	0/0:23,0:24:64.92:0,65,518	1/1:10,26:36:56.56:807,57,0	1/1:4,13:17:8.44:295,8,0	0/0:31,0:31:59.87:0,60,491	0/1:4,15:19:19.79:426,0,20	0/0:21,0:22:38.68:0,39,424	0/0:19,0:19:47.92:0,48,391	0/0:22,0:22:53.90:0,54,439	0/0:19,0:20:52.97:0,53,424	0/0:17,1:18:9.91:0,10,281	0/0:25,0:25:71.87:0,72,584	0/0:18,0:18:53.90:0,54,437	0/1:10,9:19:12.03:270,0,12	0/0:16,0:16:41.94:0,42,345	1/1:9,20:29:63.11:649,63,0	1/1:4,28:32:53.50:756,54,0	0/1:25,0:24:9.11:9,0,380	0/0:17,0:17:41.90:0,42,339	0/0:23,0:24:55.92:0,56,443	0/0:25,0:25:68.89:0,69,563	1/1:2,20:22:45.11:479,45,0	0/0:17,0:17:38.94:0,39,318	0/0:30,0:30:80.87:0,81,659	0/0:11,0:11:26.95:0,27,222
chr10	7998091	.	CCCT	C	1540.52	PASS	AB=0.842;AC=22;AF=0.393;AN=56;BaseQRankSum=1.892;DP=332;FS=3.196;HRun=0;HaplotypeScore=104.0485;InbreedingCoeff=-0.1331;MQ=43.11;MQ0=9;MQRankSum=-0.534;QD=8.46;ReadPosRankSum=1.653;VQSLOD=2.9139;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:13:17.52:0,18,133	0/1:3,1:4:29.31:29,0,50	0/0:31,0:12:30.30:0,30,584	0/0:54,0:20:46.72:0,47,775	1/1:7,2:9:11.57:92,12,0	1/1:11,1:12:14.28:133,14,0	0/1:13,2:15:41.12:46,0,41	0/1:11,0:11:85.81:86,0,286	0/1:6,3:9:20:44,0,20	0/1:13,0:13:2.88:3,0,329	0/0:7,0:7:9.02:0,9,133	0/0:7,0:7:9.63:0,10,196	0/0:10,0:10:0.77:0,1,94	0/0:3,0:3:3.01:0,3,74	0/1:5,3:8:18.94:19,0,33	0/1:6,3:9:37.84:93,0,38	0/1:11,6:17:5.26:241,0,5	0/1:3,0:3:16.81:17,0,30	0/1:12,4:14:99:228,0,191	0/1:8,1:8:61.92:62,0,63	0/1:4,1:5:18.98:19,0,33	0/0:10,0:10:17.86:0,18,265	0/0:8,0:8:2.99:0,3,25	0/0:5,0:5:9.03:0,9,218	1/1:5,2:7:2.62:11,3,0	0/1:7,4:11:99:169,0,124	1/1:7,4:11:16.07:201,16,0	0/1:11,2:13:44.32:215,0,44
chr10	7998094	.	TTCTTCC	T	2634.33	PASS	AB=0.882;AC=22;AF=0.407;AN=54;BaseQRankSum=2.820;DP=266;FS=11.809;HRun=0;HaplotypeScore=90.4439;InbreedingCoeff=-0.2848;MQ=40.83;MQ0=10;MQRankSum=0.072;QD=17.11;ReadPosRankSum=1.654;VQSLOD=2.0029;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:10,0:9:33.48:33,0,37	0/1:4,0:4:60.25:60,0,86	0/0:31,0:11:27.09:0,27,789	0/0:52,0:18:38.79:0,39,983	1/1:6,0:6:1.57:84,2,0	1/1:6,0:7:11.97:147,12,0	0/1:8,0:11:48.48:69,0,48	0/0:6,0:6:18.06:0,18,328	0/1:8,0:8:26.04:42,0,26	0/1:4,6:10:99:316,0,354	0/0:2,2:4:6.02:0,6,171	0/1:2,4:6:60.78:61,0,209	0/1:3,4:7:54.54:195,0,55	0/0:3,0:3:3.01:0,3,105	0/0:6,0:6:3.01:0,3,63	0/1:8,0:7:55.78:193,0,56	0/1:11,0:13:8.26:361,0,8	0/1:1,1:2:30.02:63,0,30	0/1:13,0:11:99:269,0,204	0/1:8,0:7:50.47:101,0,50	0/0:3,0:3:3.01:0,3,46	0/1:3,8:11:13.84:14,0,288	./.	0/0:3,1:4:9.03:0,9,281	0/1:6,0:6:5.46:15,0,5	0/1:10,0:9:99:276,0,119	1/1:6,0:7:17.85:322,18,0	0/1:6,0:7:2.67:172,0,3
chr10	7998097	.	TTCC	T	1070	PASS	AB=0.847;AC=20;AF=0.370;AN=54;BaseQRankSum=5.106;DP=255;FS=9.019;HRun=0;HaplotypeScore=82.8552;InbreedingCoeff=-0.0209;MQ=40.31;MQ0=12;MQRankSum=-1.503;QD=9.30;ReadPosRankSum=1.756;VQSLOD=2.2789;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:6:2.21:0,2,24	0/1:4,1:5:26.41:26,0,48	0/0:27,0:10:24.08:0,24,450	0/0:48,0:15:41.86:0,42,666	1/1:4,2:6:1.27:35,1,0	1/1:5,1:5:5.95:59,6,0	0/0:6,2:8:4.54:0,5,27	0/0:6,0:6:17.69:0,18,115	0/0:4,3:7:2.97:0,3,20	0/1:11,0:11:99:157,0,218	0/0:4,0:4:6.02:0,6,104	0/1:7,0:7:20.55:21,0,146	0/1:7,0:7:44.35:82,0,44	0/0:4,0:3:3.01:0,3,64	0/0:3,3:6:3.01:0,3,42	0/1:5,3:8:28.66:91,0,29	0/1:9,5:14:3.09:179,0,3	1/1:2,0:2:3.48:34,3,0	0/1:9,3:10:41.72:119,0,42	0/1:7,1:7:15.15:15,0,22	0/0:3,1:4:2.88:0,3,15	0/0:11,0:11:3.57:0,4,168	./.	0/0:4,0:4:9.03:0,9,163	0/1:4,2:6:2.95:3,0,6	0/1:7,4:10:45.36:149,0,45	1/1:2,4:6:14.84:164,15,0	1/1:4,2:6:1.39:87,1,0
chr10	7998104	.	CCTCCCTCTCTCTCT	C	2430.52	PASS	AB=0.954;AC=34;AF=0.607;AN=56;BaseQRankSum=3.416;DP=278;FS=4.341;HRun=0;HaplotypeScore=109.6475;InbreedingCoeff=0.3310;MQ=35.85;MQ0=22;MQRankSum=-4.011;QD=13.89;ReadPosRankSum=2.969;VQSLOD=1.9866;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:9,0:8:3.09:11,0,3	1/1:2,1:5:8.92:138,9,0	0/0:19,0:8:14.97:0,15,125	0/0:38,0:14:18.40:0,18,208	1/1:2,2:5:2.37:16,2,0	1/1:2,0:8:3.01:104,3,0	1/1:11,0:8:2.52:18,3,0	1/1:6,0:6:17.89:134,18,0	1/1:3,1:7:3.01:82,3,0	0/1:12,0:12:34.30:34,0,637	0/0:6,0:6:6.02:0,6,222	0/1:10,0:10:4.15:4,0,374	0/1:7,0:7:42.11:60,0,42	0/0:6,0:5:3.01:0,3,100	1/1:5,2:7:6.02:119,6,0	1/1:4,1:7:14.84:175,15,0	1/1:9,8:16:23.10:268,23,0	0/1:6,0:6:5.29:5,0,333	1/1:5,0:11:13.99:262,14,0	1/1:3,6:7:5.74:140,6,0	1/1:8,0:6:5.78:44,6,0	0/0:13,0:13:9.03:0,9,331	0/0:5,0:5:0:0,0,0	0/0:6,0:6:8.92:0,9,399	0/0:2,6:8:0:0,0,0	0/1:8,5:11:85.49:399,0,85	1/1:5,1:5:11.89:183,12,0	1/1:3,2:5:14.98:399,15,0
chr10	7998161	.	C	CGTGTGT	1828.74	PASS	AB=0.933;AC=31;AF=0.620;AN=50;BaseQRankSum=-3.032;DP=478;FS=0.000;HRun=0;HaplotypeScore=122.9500;InbreedingCoeff=0.2636;MQ=37.70;MQ0=73;MQRankSum=-3.436;QD=4.75;ReadPosRankSum=-4.116;VQSLOD=0.3507;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:14:6.02:115,6,0	0/0:10,0:9:1.73:0,2,5	0/0:5,0:3:6.02:0,6,111	0/0:7,0:3:6.02:0,6,123	0/1:10,4:14:0:0,0,0	0/1:30,0:29:16.95:17,0,133	0/1:29,0:21:2.58:41,0,3	1/1:30,0:27:21.53:422,22,0	0/1:24,0:21:1.22:1,0,129	1/1:24,0:14:12.30:198,12,0	0/1:9,0:7:0.02:0,0,0	1/1:14,0:13:3.01:52,3,0	1/1:10,0:8:9.03:152,9,0	./.	0/1:12,11:27:0.25:0,0,0	1/1:10,3:16:0.57:182,1,0	0/0:22,0:20:2.96:0,3,172	./.	0/0:22,0:14:8.39:0,8,131	0/1:21,0:18:8.99:9,0,59	1/1:26,0:19:3:25,3,0	1/1:17,0:13:2.93:52,3,0	0/1:7,0:5:0.19:0,0,0	1/1:17,0:13:2.83:20,3,0	0/1:15,0:14:11.53:12,0,18	1/1:17,2:18:15.93:324,16,0	1/1:8,4:13:12.04:342,12,0	./.
chr10	7998397	.	T	TC	2182.22	PASS	AB=0.950;AC=22;AF=0.393;AN=56;BaseQRankSum=0.696;DP=425;FS=0.986;HRun=1;HaplotypeScore=74.8054;InbreedingCoeff=0.8346;MQ=79.25;MQ0=0;MQRankSum=1.429;QD=12.26;ReadPosRankSum=2.049;VQSLOD=2.3000;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:16,1:19:35.10:222,35,0	0/0:7,0:10:17.61:0,18,213	0/1:16,0:10:13.86:14,0,118	0/1:21,0:20:3.91:4,0,161	0/0:14,0:18:38.86:0,39,386	0/0:15,0:17:39.48:0,39,436	0/0:14,0:15:42.05:0,42,457	0/0:18,0:21:54.96:0,55,590	0/0:11,0:14:23.80:0,24,253	1/1:2,17:19:46.92:467,47,0	1/1:0,10:11:29.78:332,30,0	1/1:4,12:16:12.04:182,12,0	1/1:4,6:10:6:92,6,0	1/1:2,12:14:8.86:131,9,0	0/0:14,0:14:25.82:0,26,262	0/0:8,0:8:15:0,15,162	0/0:20,0:26:53.50:0,54,605	1/1:5,11:16:19.11:235,19,0	0/0:13,0:13:27.06:0,27,323	0/0:11,0:11:30.06:0,30,347	0/0:9,0:10:20.97:0,21,242	1/1:2,9:11:17.89:214,18,0	1/1:0,8:8:14.95:179,15,0	1/1:10,5:15:29.34:322,29,0	0/0:17,0:17:39.02:0,39,400	0/0:23,0:24:36.68:0,37,592	0/0:15,0:15:27.45:0,27,274	0/0:11,0:13:21.34:0,21,243
chr10	8001652	.	G	GCTCT	578.64	PASS	AB=1.000;AC=33;AF=0.786;AN=42;BaseQRankSum=0.125;DP=608;FS=8.059;HRun=0;HaplotypeScore=145.4381;InbreedingCoeff=0.2989;MQ=65.75;MQ0=20;MQRankSum=0.178;QD=1.66;ReadPosRankSum=-0.196;VQSLOD=1.8436;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:1.17:0,1,5	1/1:11,0:11:11.45:106,11,0	./.	0/0:54,0:32:1.42:0,1,8	1/1:20,0:20:2.99:24,3,0	1/1:26,0:24:5.52:23,6,0	1/1:21,0:21:2.95:20,3,0	1/1:32,0:28:0.93:2,1,0	1/1:26,0:25:0.89:2,1,0	1/1:23,0:23:12.54:85,13,0	0/0:11,0:11:0:0,0,0	1/1:11,0:11:4.55:29,5,0	1/1:14,0:14:5.37:33,5,0	./.	./.	1/1:10,0:10:3.47:26,3,0	1/1:12,0:11:0.30:1,0,0	1/1:15,0:13:7.73:76,8,0	1/1:27,0:25:3.40:53,3,0	./.	0/0:33,0:28:4.26:0,4,81	./.	./.	1/1:37,0:34:5.29:29,5,0	./.	1/1:26,0:26:17.87:142,18,0	0/1:16,0:16:8.54:13,0,9	1/1:19,0:17:4.16:16,4,0
chr10	8001679	.	CTCTCTCTCTG	C	755.74	PASS	AB=0.953;AC=28;AF=0.636;AN=44;BaseQRankSum=-0.344;DP=589;FS=29.650;HRun=0;HaplotypeScore=128.0021;InbreedingCoeff=0.0839;MQ=35.28;MQ0=68;MQRankSum=2.272;QD=2.04;ReadPosRankSum=-0.317;VQSLOD=0.9572;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:16:0.38:0,0,2	1/1:8,0:8:13.47:93,13,0	./.	0/0:21,0:8:1.04:0,1,7	1/1:12,0:12:3.88:26,4,0	1/1:25,0:21:9.31:46,9,0	1/1:18,0:14:2.75:20,3,0	0/0:58,0:27:17.22:0,17,370	1/1:28,0:26:3.76:62,4,0	0/1:25,0:23:11.08:88,0,11	0/1:15,0:13:0:0,0,0	1/1:12,0:11:3.47:26,3,0	1/1:14,0:13:5.67:37,6,0	./.	./.	1/1:15,0:15:3.47:26,3,0	0/1:16,0:14:21.60:45,0,22	1/1:19,0:14:7.45:100,7,0	0/1:24,0:20:51.04:51,0,84	0/1:7,11:17:0:0,0,0	0/0:35,0:24:23.06:0,23,223	./.	./.	1/1:39,0:33:12.41:92,12,0	./.	0/1:36,0:33:99:132,0,131	0/1:30,0:24:28.27:28,0,32	0/1:17,0:13:17.33:17,0,25
chr10	8001717	.	CTG	C	359.71	PASS	AB=0.958;AC=20;AF=0.476;AN=42;BaseQRankSum=4.660;DP=450;FS=1.836;HRun=0;HaplotypeScore=56.9187;InbreedingCoeff=0.1523;MQ=25.82;MQ0=88;MQRankSum=-0.942;QD=1.47;ReadPosRankSum=-0.223;VQSLOD=1.5848;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:15:2.98:22,3,0	0/1:5,0:5:11.03:13,0,11	./.	./.	./.	0/1:23,2:20:37.84:61,0,38	0/1:11,3:7:0:0,0,0	0/0:39,0:15:33.41:0,33,221	0/0:22,0:19:16.39:0,16,110	1/1:9,0:6:1.29:42,1,0	./.	0/0:4,0:3:0:0,0,0	1/1:4,0:3:1.55:4,2,0	./.	0/0:29,0:19:0:0,0,0	1/1:10,1:10:2.96:19,3,0	0/0:15,1:8:1.92:0,2,61	1/1:18,0:9:11.87:68,12,0	0/0:25,0:21:22.14:0,22,281	1/1:13,0:13:0.47:1,0,0	0/0:30,0:15:2.98:0,3,22	./.	./.	1/1:24,0:14:1.25:3,1,0	0/0:8,0:8:8.85:0,9,56	0/1:45,0:35:12.25:199,0,12	0/1:31,0:21:20.87:21,0,38	0/1:23,0:15:28.17:28,0,60
chr10	8001721	.	CTCTCTCTCTCTCTCTG	C	763.37	PASS	AB=1.000;AC=7;AF=0.194;AN=36;BaseQRankSum=0.701;DP=446;FS=3.402;HRun=0;HaplotypeScore=82.2541;InbreedingCoeff=0.1349;MQ=25.31;MQ0=91;MQRankSum=0.290;QD=4.36;ReadPosRankSum=2.899;VQSLOD=1.3167;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:14:0.89:0,1,2	0/0:6,0:6:3.01:0,3,78	./.	./.	./.	0/0:26,0:20:14.92:0,15,270	0/0:17,0:7:3:0,3,26	0/1:31,0:12:2.08:65,0,2	0/0:20,0:17:15.04:0,15,218	0/0:8,0:5:6.89:0,7,45	./.	0/0:5,0:4:0:0,0,0	./.	./.	0/0:30,0:20:0.47:0,0,1	0/0:9,0:8:0:0,0,0	0/0:16,0:7:12.03:0,12,138	0/1:17,0:8:9.66:17,0,10	0/1:28,0:22:5.91:6,0,677	./.	0/0:30,0:14:3.01:0,3,73	./.	./.	./.	0/0:10,0:10:9.03:0,9,198	1/1:21,22:34:18.94:707,19,0	0/1:30,0:20:26.35:41,0,26	0/1:26,0:15:34.55:35,0,78
chr10	8001735	.	CTG	C	854.51	PASS	AB=0.973;AC=12;AF=0.333;AN=36;BaseQRankSum=3.604;DP=458;FS=3.330;HRun=0;HaplotypeScore=43.6364;InbreedingCoeff=0.3361;MQ=24.34;MQ0=92;MQRankSum=-0.023;QD=4.70;ReadPosRankSum=-0.551;VQSLOD=1.9963;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:14:2.98:22,3,0	0/0:4,3:7:5.49:0,5,66	./.	./.	./.	0/1:26,0:18:2.04:2,0,160	0/0:24,0:10:2.63:0,3,14	1/1:19,0:5:2.97:21,3,0	0/0:20,1:18:17.94:0,18,291	0/0:6,0:4:5.51:0,6,29	./.	0/0:6,0:3:0:0,0,0	0/1:6,0:4:0:0,0,0	./.	0/0:31,4:22:0:0,0,0	./.	0/0:19,0:9:11.99:0,12,177	1/1:14,1:6:8.83:81,9,0	0/0:31,0:25:20.37:0,20,708	./.	0/0:36,0:16:3.01:0,3,57	./.	./.	./.	0/0:10,0:10:9.03:0,9,161	1/1:37,1:28:61.07:752,61,0	0/1:28,1:19:19.51:42,0,20	0/1:23,2:12:51.88:52,0,82
chr10	8001737	.	G	GTC	363.71	PASS	AB=0.978;AC=9;AF=0.281;AN=32;BaseQRankSum=3.968;DP=472;FS=10.403;HRun=0;HaplotypeScore=48.3344;InbreedingCoeff=0.2883;MQ=24.14;MQ0=94;MQRankSum=-1.654;QD=1.89;ReadPosRankSum=0.000;VQSLOD=0.2014;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:7,0:7:6.01:0,6,65	./.	./.	./.	0/0:28,0:19:11.03:0,11,122	0/0:26,0:12:3.60:0,4,18	0/1:19,0:4:0:0,0,0	0/0:22,0:20:18.04:0,18,214	0/0:5,0:3:2.87:0,3,19	./.	./.	./.	./.	0/1:35,1:22:0:0,0,0	./.	0/0:18,0:8:9.03:0,9,105	0/0:16,0:6:1.24:0,1,9	0/1:33,0:26:51.76:52,0,480	0/1:10,0:10:0:0,0,0	0/0:37,0:18:2.97:0,3,38	./.	./.	./.	0/0:10,0:10:9.03:0,9,114	1/1:37,0:27:24.53:323,25,0	1/1:30,0:19:5.64:51,6,0	0/1:26,0:13:25.69:42,0,26
chr10	8001811	.	CTG	C	343.72	PASS	AB=0.992;AC=20;AF=0.625;AN=32;BaseQRankSum=0.725;DP=487;FS=0.000;HRun=0;HaplotypeScore=30.0530;InbreedingCoeff=0.0309;MQ=18.21;MQ0=170;MQRankSum=-0.027;QD=1.28;ReadPosRankSum=-2.336;VQSLOD=-0.1119;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	./.	0/1:19,0:8:0:0,0,0	0/0:25,0:6:0:0,0,0	./.	1/1:15,0:8:5.16:25,5,0	1/1:8,3:3:3.30:20,3,0	./.	0/0:20,0:6:0:0,0,0	./.	./.	0/1:28,0:16:0:0,0,0	1/1:10,17:16:5.97:63,6,0	0/1:18,1:7:13.27:13,0,13	1/1:9,0:4:5.95:43,6,0	0/1:13,0:9:11.01:11,0,34	0/0:8,0:5:0:0,0,0	0/1:45,0:19:12.87:17,0,13	./.	./.	./.	1/1:9,0:5:2.96:19,3,0	0/1:28,0:9:24.26:45,0,24	1/1:25,0:15:14.94:96,15,0	1/1:19,0:8:11.88:85,12,0
chr10	8001938	.	T	TCCTTCGACTTCATGGCTGTTG	13604.53	PASS	AB=0.677;AC=48;AF=0.960;AN=50;BaseQRankSum=-0.318;DP=125;FS=28.413;HRun=0;HaplotypeScore=120.0041;InbreedingCoeff=-0.1469;MQ=103.59;MQ0=0;MQRankSum=-2.943;QD=111.51;ReadPosRankSum=1.712;VQSLOD=2.7877;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,0:2:6.02:392,6,0	1/1:5,0:5:9:353,9,0	0/1:4,1:8:22.22:953,0,22	0/1:6,1:11:57.19:1044,0,57	1/1:6,0:5:15.05:746,15,0	1/1:5,0:4:3.01:270,3,0	1/1:4,0:4:3.01:79,3,0	1/1:3,0:3:6.02:127,6,0	1/1:2,0:2:6.02:366,6,0	1/1:12,0:12:31.33:1854,31,0	1/1:5,0:5:9.03:442,9,0	1/1:1,0:1:3.01:50,3,0	1/1:3,0:3:8.99:553,9,0	1/1:2,0:2:3.01:269,3,0	1/1:2,0:2:3.01:38,3,0	./.	./.	./.	1/1:3,0:2:3.01:50,3,0	1/1:12,0:12:30.10:2076,30,0	1/1:1,0:1:3.01:74,3,0	1/1:9,0:9:18.06:1349,18,0	1/1:7,0:7:15.05:807,15,0	1/1:2,0:2:3.01:260,3,0	1/1:9,0:9:18.06:1114,18,0	1/1:3,0:3:8.99:185,9,0	1/1:2,0:2:2.98:21,3,0	1/1:3,0:3:3.01:133,3,0
chr10	8008540	.	GACAACAACAACA	G	5210.69	PASS	AB=0.665;AC=29;AF=0.537;AN=54;BaseQRankSum=0.146;DP=539;FS=1.170;HRun=0;HaplotypeScore=183.6434;InbreedingCoeff=0.3924;MQ=70.80;MQ0=3;MQRankSum=-4.641;QD=15.89;ReadPosRankSum=1.571;VQSLOD=4.0559;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:10,15:25:66.28:315,0,66	0/1:5,0:8:21.84:22,0,138	./.	0/0:22,0:19:9.03:0,9,178	0/1:8,1:19:99:114,0,149	0/0:4,0:14:18.04:0,18,252	0/0:9,0:19:35.99:0,36,381	0/0:34,0:34:6.58:0,7,28	0/1:16,0:29:17.53:18,0,226	1/1:10,17:27:39.08:1071,39,0	1/1:8,6:14:13.55:259,14,0	1/1:7,10:16:15.05:486,15,0	1/1:6,8:14:12.04:412,12,0	1/1:5,14:19:21.07:721,21,0	0/1:13,0:25:22.87:175,0,23	0/1:8,1:18:57.27:195,0,57	0/0:12,0:22:11.95:0,12,145	1/1:10,6:16:9.03:309,9,0	0/0:18,0:23:18.05:0,18,269	0/0:8,0:17:27.09:0,27,501	0/0:9,0:18:33.11:0,33,1092	1/1:5,10:15:23.82:326,24,0	1/1:8,10:18:5:204,5,0	1/1:14,2:17:15:254,15,0	0/0:9,0:16:15.03:0,15,170	0/1:11,1:23:55.92:193,0,56	1/1:9,0:17:11.97:95,12,0	1/1:7,0:7:5.95:42,6,0
chr10	8009721	.	GT	G	2643.33	PASS	AB=0.933;AC=19;AF=0.339;AN=56;BaseQRankSum=3.575;DP=620;FS=9.354;HRun=11;HaplotypeScore=84.9215;InbreedingCoeff=0.8599;MQ=76.45;MQ0=5;MQRankSum=0.853;QD=12.53;ReadPosRankSum=3.528;VQSLOD=2.9862;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:32:89.88:0,90,914	0/0:18,0:18:39.10:0,39,416	0/0:40,0:21:1.56:0,2,64	0/0:29,0:19:11.53:0,12,102	0/0:4,0:24:45.31:0,45,239	0/0:22,0:23:56.98:0,57,589	0/0:12,1:13:8.42:0,8,287	0/0:12,0:26:42.70:0,43,239	0/1:23,2:28:4.77:5,0,493	1/1:9,17:26:50.87:417,51,0	1/1:6,11:17:32.91:270,33,0	1/1:3,12:17:5.03:226,5,0	1/1:5,20:25:21.91:385,22,0	1/1:7,11:18:35.93:295,36,0	0/0:7,0:17:31.66:0,32,178	0/0:2,0:13:25.69:0,26,134	0/0:28,0:29:57.89:0,58,659	1/1:2,12:17:13.10:281,13,0	0/0:28,0:28:69.65:0,70,737	0/0:16,1:19:29.16:0,29,483	0/0:12,1:14:11.26:0,11,302	1/1:3,16:20:34.96:277,35,0	1/1:6,10:18:15.81:250,16,0	1/1:5,19:25:51.93:443,52,0	0/0:28,0:29:66:0,66,686	0/0:6,0:16:28.70:0,29,161	0/0:7,0:22:39.76:0,40,220	0/0:5,0:14:17.65:0,18,92
chr10	8010510	.	AAGGAGAAGGAGAAGGAGAAGG	A	1210.16	PASS	AB=1.000;AC=27;AF=0.519;AN=52;BaseQRankSum=-0.749;DP=400;FS=3.175;HRun=0;HaplotypeScore=155.9298;InbreedingCoeff=0.4722;MQ=35.47;MQ0=101;MQRankSum=-3.634;QD=5.43;ReadPosRankSum=-5.690;VQSLOD=0.6871;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:24:45.06:45,0,288	0/0:8,0:6:18.06:0,18,429	./.	./.	0/1:14,0:7:13.86:31,0,14	0/0:27,0:22:40.68:0,41,1121	0/0:22,0:15:29.02:0,29,519	1/1:16,0:9:13.99:34,14,0	0/0:17,0:14:15.85:0,16,540	1/1:7,5:11:10.59:141,11,0	1/1:7,7:9:10.52:115,11,0	1/1:12,0:9:18.12:244,18,0	1/1:7,0:5:5.81:46,6,0	1/1:11,0:6:10.59:176,11,0	0/1:19,0:13:11.91:201,0,12	0/1:14,0:12:6.24:90,0,6	0/0:19,0:14:33.55:0,34,785	1/1:6,0:5:8.16:53,8,0	0/0:16,0:8:12.59:0,13,418	0/0:18,0:10:13.62:0,14,390	0/0:12,0:8:4.48:0,4,88	1/1:6,6:6:6.02:94,6,0	1/1:6,3:4:0.47:1,0,0	1/1:21,0:9:10.83:104,11,0	0/0:16,0:13:24.60:0,25,670	0/0:21,0:14:5.44:0,5,139	0/1:20,0:14:12.64:13,0,40	1/1:7,0:2:1.55:4,2,0
chr10	8010516	.	AAGGAGAAGGAGAAGG	A	1500.36	PASS	AB=1.000;AC=33;AF=0.635;AN=52;BaseQRankSum=-1.801;DP=414;FS=7.009;HRun=0;HaplotypeScore=121.0630;InbreedingCoeff=0.6052;MQ=32.47;MQ0=114;MQRankSum=-3.569;QD=5.64;ReadPosRankSum=-3.987;VQSLOD=0.5478;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:22:99:174,0,132	0/0:8,0:6:18.03:0,18,305	./.	./.	1/1:7,6:6:9:97,9,0	0/0:27,0:21:12.89:0,13,765	0/0:23,0:15:2.97:0,3,262	1/1:16,0:9:13.99:34,14,0	0/0:17,0:13:12.75:0,13,332	1/1:12,0:11:9.75:98,10,0	1/1:16,0:10:10.64:67,11,0	1/1:15,0:11:18.22:144,18,0	1/1:8,0:6:4.52:12,5,0	1/1:10,0:5:10.57:110,11,0	1/1:18,0:11:24.38:344,24,0	1/1:16,0:13:24.15:222,24,0	0/0:21,0:15:21.04:0,21,520	1/1:7,0:5:9.07:52,9,0	0/0:16,0:9:10.04:0,10,298	0/0:19,0:10:13.58:0,14,267	0/1:12,0:7:4.59:5,0,14	1/1:13,0:6:5.98:56,6,0	1/1:11,0:5:2.03:5,2,0	0/1:19,0:7:5.85:27,0,6	0/0:16,0:13:24.60:0,25,452	1/1:21,0:14:6.12:119,6,0	1/1:23,0:13:21.92:115,22,0	1/1:7,0:1:1.55:4,2,0
chr10	8010608	.	GAAA	G	2080.05	PASS	AB=0.543;AC=13;AF=0.232;AN=56;BaseQRankSum=3.179;DP=462;FS=4.132;HRun=4;HaplotypeScore=63.7920;InbreedingCoeff=0.8750;MQ=58.38;MQ0=42;MQRankSum=3.332;QD=14.75;ReadPosRankSum=-1.316;VQSLOD=-0.4354;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:20:42.24:0,42,433	0/0:7,0:7:17.91:0,18,141	0/0:29,0:16:32.25:0,32,397	0/0:14,0:3:9.01:0,9,95	1/1:20,0:19:53.63:405,54,0	0/0:19,0:18:41.55:0,42,356	0/0:12,0:10:29.86:0,30,253	1/1:5,24:27:71.82:590,72,0	0/0:12,0:11:26.96:0,27,231	0/0:13,0:12:32.94:0,33,289	0/0:12,0:12:35.74:0,36,269	0/0:8,0:7:20.83:0,21,148	0/0:9,0:7:14.94:0,15,119	0/0:8,0:8:16.99:0,17,134	1/1:16,0:14:38.84:331,39,0	1/1:4,12:15:2.91:49,3,0	0/0:31,0:29:68.56:0,69,567	0/0:9,0:8:18.44:0,18,150	0/0:20,0:17:50.92:0,51,529	0/0:20,0:17:41.90:0,42,346	0/0:12,0:10:24.89:0,25,214	0/0:14,0:13:31.73:0,32,255	0/0:15,0:13:35.92:0,36,309	0/0:11,0:8:23.74:0,24,161	0/0:22,0:22:48.09:0,48,407	0/1:3,16:18:0.11:423,0,0	1/1:23,0:19:43.25:383,43,0	1/1:1,17:17:6.01:77,6,0
chr10	8018612	.	TA	T	1605	PASS	AB=1.000;AC=20;AF=0.357;AN=56;BaseQRankSum=10.132;DP=271;FS=2.790;HRun=8;HaplotypeScore=35.0348;InbreedingCoeff=0.8296;MQ=68.22;MQ0=1;MQRankSum=0.062;QD=20.06;ReadPosRankSum=1.707;VQSLOD=3.1107;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:33.10:0,33,399	0/0:3,0:3:9.02:0,9,97	0/1:6,0:6:19.33:19,0,94	0/1:4,0:4:3.16:3,0,49	0/0:15,0:15:42.13:0,42,507	0/0:11,0:11:15.05:0,15,181	0/0:13,0:13:39.12:0,39,471	0/0:19,0:19:45.09:0,45,517	0/0:22,0:22:54.13:0,54,626	1/1:0,12:12:36.06:347,36,0	1/1:0,11:11:30.05:290,30,0	1/1:1,4:5:12.02:116,12,0	1/1:0,4:4:12.02:115,12,0	1/1:0,8:8:24.04:232,24,0	0/0:5,0:5:11.97:0,12,127	0/0:6,0:6:18.06:0,18,217	0/0:20,0:20:45.13:0,45,532	1/1:0,9:9:24.04:232,24,0	0/0:12,0:12:30.09:0,30,362	0/0:7,0:7:21.06:0,21,254	0/0:8,0:7:21.01:0,21,223	1/1:0,6:6:18.03:173,18,0	1/1:1,8:9:21.03:203,21,0	1/1:0,6:6:9.01:86,9,0	0/0:12,0:12:27.08:0,27,326	0/0:9,0:9:27.07:0,27,315	0/0:10,0:10:27.07:0,27,314	0/0:7,0:7:21.06:0,21,254
chr10	8018646	.	G	GA	415.81	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-3.152;DP=370;FS=12.300;HRun=6;HaplotypeScore=55.1947;InbreedingCoeff=0.9717;MQ=81.57;MQ0=0;MQRankSum=-1.354;QD=27.72;ReadPosRankSum=0.590;VQSLOD=3.2556;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,14:15:42.09:511,42,0	0/0:7,0:7:21.02:0,21,205	0/0:13,0:13:22.52:0,23,291	0/0:11,0:11:24.03:0,24,234	0/0:18,0:18:54.12:0,54,551	0/0:9,0:9:21.05:0,21,214	0/0:15,0:15:42.09:0,42,428	0/0:22,0:22:66.15:0,66,673	0/0:25,0:25:57.11:0,57,573	0/0:13,0:13:36.08:0,36,367	0/0:14,0:14:39.09:0,39,398	0/0:7,0:7:21.05:0,21,214	0/0:8,0:8:21.04:0,21,214	0/0:16,0:16:39.07:0,39,391	0/0:11,0:11:30.07:0,30,306	0/0:12,0:12:33.07:0,33,337	0/0:19,0:19:45.10:0,45,459	0/0:16,0:16:45.10:0,45,459	0/0:10,0:10:30.07:0,30,306	0/0:15,0:15:39.07:0,39,391	0/0:19,0:19:48.10:0,48,489	0/0:10,0:10:30.07:0,30,306	0/0:11,0:11:27.06:0,27,275	0/0:10,0:10:24.03:0,24,236	0/0:13,0:13:33.07:0,33,337	0/0:11,0:11:33.08:0,33,337	0/0:12,0:12:36.06:0,36,359	0/0:8,0:8:24.05:0,24,245
chr10	8018771	.	G	GA	4765.35	PASS	AB=0.926;AC=19;AF=0.352;AN=54;BaseQRankSum=-11.058;DP=490;FS=2.386;HRun=4;HaplotypeScore=50.4394;InbreedingCoeff=0.9089;MQ=84.72;MQ0=0;MQRankSum=-2.066;QD=28.88;ReadPosRankSum=2.042;VQSLOD=4.4786;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,99,1097	./.	0/0:18,0:18:45.06:0,45,494	0/0:18,0:18:36.09:0,36,391	0/0:8,0:8:24.07:0,24,272	0/0:16,0:16:33.09:0,33,374	0/0:19,0:19:54.12:0,54,593	0/0:28,0:28:75.21:0,75,851	0/0:29,0:29:84.22:0,84,943	1/1:2,18:20:57.19:774,57,0	1/1:0,15:15:42.10:553,42,0	1/1:1,12:13:30.10:410,30,0	1/1:3,5:8:21.04:268,21,0	1/1:4,18:22:51.14:677,51,0	0/0:21,0:21:57.16:0,57,647	0/0:10,0:10:30.09:0,30,340	0/0:23,0:23:63.16:0,63,704	1/1:3,11:14:36.10:472,36,0	0/0:16,0:16:45.11:0,45,501	0/0:16,0:16:48.06:0,48,511	0/0:26,0:26:60.13:0,60,661	1/1:0,13:13:33.11:451,33,0	1/1:0,10:10:27.09:369,27,0	1/1:4,21:25:57.19:780,57,0	0/0:17,0:17:48.14:0,48,545	0/1:23,2:25:9.90:10,0,677	0/0:22,0:20:60.17:0,60,680	0/0:3,0:3:6.02:0,6,68
chr10	8018867	.	GC	G	5383.57	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=16.602;DP=530;FS=17.674;HRun=2;HaplotypeScore=64.5187;InbreedingCoeff=0.9514;MQ=89.38;MQ0=0;MQRankSum=-2.404;QD=37.39;ReadPosRankSum=5.953;VQSLOD=3.0034;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,117,1750	0/0:3,0:3:9.03:0,9,135	0/0:20,0:20:54.18:0,54,796	0/0:19,0:19:57.02:0,57,761	0/0:18,0:17:45.15:0,45,674	0/0:27,0:27:81.27:0,81,1214	0/0:14,0:14:42.14:0,42,630	0/0:24,0:24:69.23:0,69,1017	0/0:27,0:27:78.26:0,78,1165	1/1:0,24:24:72.22:921,72,0	1/1:0,17:17:51.17:662,51,0	1/1:0,12:12:36.12:467,36,0	1/1:0,20:20:54.18:701,54,0	1/1:2,16:18:48.16:623,48,0	0/0:30,0:30:90.27:0,90,1308	0/0:25,0:25:75.25:0,75,1124	0/0:22,0:22:66.22:0,66,989	1/1:1,13:14:42.12:529,42,0	0/0:14,0:14:42.10:0,42,605	0/0:16,0:16:45.15:0,45,672	0/0:25,0:25:72.24:0,72,1075	1/1:0,10:10:30.10:389,30,0	1/1:0,14:14:39.13:506,39,0	1/1:0,15:15:45.15:584,45,0	0/0:15,0:15:45.15:0,45,674	0/0:12,1:13:0.17:0,0,501	0/0:21,0:21:60.20:0,60,899	0/0:12,0:12:36.12:0,36,536
chr10	8019760	.	T	TA	4586.48	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-1.996;DP=645;FS=2.058;HRun=8;HaplotypeScore=68.5447;InbreedingCoeff=0.9503;MQ=67.70;MQ0=3;MQRankSum=-0.359;QD=26.82;ReadPosRankSum=-0.756;VQSLOD=5.2854;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:50:99:0,141,1266	0/0:8,0:7:17.99:0,18,159	0/0:17,0:13:14.31:0,14,187	0/0:14,0:11:0.71:0,1,109	1/1:2,20:22:57.10:640,57,0	0/0:17,0:17:49.82:0,50,439	0/0:22,0:22:57.02:0,57,522	1/1:12,24:36:69.21:796,69,0	0/0:24,0:24:63.02:0,63,576	0/0:21,0:21:60.02:0,60,544	0/0:26,0:26:59.95:0,60,539	0/0:24,0:24:69.03:0,69,631	0/0:27,0:27:68.98:0,69,625	0/0:42,0:42:99:0,108,974	1/1:1,34:35:93.28:1073,93,0	1/1:1,18:19:48.14:554,48,0	0/0:25,0:25:69.01:0,69,623	0/0:7,0:7:18.01:0,18,165	0/0:24,0:23:53.96:0,54,476	0/0:18,0:18:53.76:0,54,475	0/0:35,0:35:96.05:0,96,878	0/0:13,0:13:39.02:0,39,356	0/0:14,0:14:32.78:0,33,271	0/0:18,0:18:48.02:0,48,439	0/0:26,0:26:57.25:0,57,493	1/1:4,20:24:54.16:623,54,0	1/1:4,23:26:57.17:658,57,0	1/1:1,7:8:21.06:242,21,0
chr10	8019925	.	ATG	A	1021.74	PASS	AB=0.761;AC=4;AF=0.071;AN=56;BaseQRankSum=8.786;DP=664;FS=2.838;HRun=0;HaplotypeScore=74.8993;InbreedingCoeff=0.3759;MQ=62.19;MQ0=3;MQRankSum=-0.354;QD=10.87;ReadPosRankSum=0.222;VQSLOD=2.8630;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:15,16:32:60.51:688,61,0	0/0:20,1:21:23.28:0,23,861	0/0:28,0:12:2.90:0,3,112	0/0:22,0:11:6.32:0,6,165	0/1:32,3:35:11.78:12,0,1274	0/0:14,0:14:39.13:0,39,636	0/0:20,1:21:17.28:0,17,782	0/0:24,0:24:37.22:0,37,772	0/0:15,0:15:33.11:0,33,532	0/0:42,0:41:99:0,111,1751	0/0:20,0:20:57.17:0,57,867	0/0:16,1:17:8.22:0,8,578	0/0:23,0:23:55.07:0,55,894	0/0:26,0:26:75.24:0,75,1184	0/0:22,0:22:54.17:0,54,855	0/0:21,0:21:54.16:0,54,849	0/0:20,0:20:48.09:0,48,711	0/0:22,0:22:48.11:0,48,718	0/0:23,0:23:45.60:0,46,670	0/0:28,0:28:77.02:0,77,1217	0/1:9,18:27:52.70:435,0,53	0/0:22,0:22:51.17:0,51,824	0/0:26,0:26:24.77:0,25,858	0/0:23,0:23:60.20:0,60,975	0/0:21,0:21:14.48:0,14,743	0/0:29,1:29:22.42:0,22,1209	0/0:26,1:27:23.30:0,23,880	0/0:12,0:12:24.08:0,24,391
chr10	8019997	.	GA	G	748.23	PASS	AB=0.971;AC=3;AF=0.054;AN=56;BaseQRankSum=7.517;DP=617;FS=5.106;HRun=8;HaplotypeScore=66.7460;InbreedingCoeff=0.5594;MQ=76.31;MQ0=1;MQRankSum=-0.022;QD=10.54;ReadPosRankSum=2.245;VQSLOD=2.1794;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,33:37:87.13:840,87,0	0/0:15,0:15:33.10:0,33,399	0/1:32,1:23:11.44:11,0,258	0/0:19,0:11:14.66:0,15,147	0/0:32,0:32:87.25:0,87,1039	0/0:13,0:13:36.11:0,36,435	0/0:11,1:12:1.12:0,1,297	0/0:29,0:29:84.25:0,84,1004	0/0:17,0:17:45.13:0,45,532	0/0:32,0:32:83.85:0,84,988	0/0:25,0:25:69.20:0,69,824	0/0:13,0:13:33.09:0,33,387	0/0:22,0:22:63.18:0,63,749	0/0:22,0:22:57.15:0,57,661	0/0:19,0:19:57.14:0,57,673	0/0:19,0:19:28.30:0,28,623	0/0:19,0:19:57.14:0,57,663	0/0:12,0:12:30.09:0,30,362	0/0:30,0:30:87.24:0,87,1016	0/0:30,1:31:58.29:0,58,986	0/0:11,0:11:26.92:0,27,282	0/0:10,0:10:27.08:0,27,326	0/0:21,0:21:60.17:0,60,713	0/0:22,0:22:66.20:0,66,795	0/0:26,0:25:78.24:0,78,942	0/0:32,0:32:90.25:0,90,1065	0/0:31,0:31:72.41:0,72,983	0/0:12,0:12:27.08:0,27,326
chr10	8020708	.	C	CA	26777.60	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-11.285;DP=670;FS=8.326;HRun=1;HaplotypeScore=58.0694;InbreedingCoeff=0.9975;MQ=97.46;MQ0=0;MQRankSum=-13.213;QD=44.33;ReadPosRankSum=7.588;VQSLOD=3.3858;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,33:33:96.33:1534,96,0	1/1:0,10:10:30.10:480,30,0	0/0:38,0:38:99:0,113,1458	0/0:28,0:28:81.27:0,81,1127	1/1:0,22:22:66.23:1055,66,0	1/1:0,20:20:51.17:815,51,0	1/1:0,18:18:51.17:815,51,0	1/1:0,33:34:99:1528,102,0	1/1:0,29:29:72.20:1123,72,0	1/1:2,32:34:99:1565,99,0	1/1:0,19:19:51.11:785,51,0	1/1:0,20:20:60.20:959,60,0	1/1:0,23:23:54.18:861,54,0	1/1:1,26:27:72.25:1150,72,0	1/1:0,32:32:90.29:1439,90,0	1/1:0,26:26:69.24:1102,69,0	1/1:0,26:26:75.26:1198,75,0	1/1:0,7:7:21.07:335,21,0	1/1:1,14:15:42.13:649,42,0	1/1:1,29:30:78.27:1247,78,0	1/1:3,33:36:99:1642,105,0	1/1:0,19:20:60.20:945,60,0	1/1:1,18:20:51.17:805,51,0	1/1:1,18:19:54.18:863,54,0	1/1:0,29:29:81.28:1295,81,0	1/1:0,19:19:54.18:863,54,0	1/1:0,25:25:75.26:1198,75,0	1/1:0,11:11:33.11:527,33,0
chr10	8021154	.	C	CA	9725.12	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-5.503;DP=585;FS=19.703;HRun=4;HaplotypeScore=126.6082;InbreedingCoeff=0.9966;MQ=70.59;MQ0=1;MQRankSum=-7.583;QD=29.12;ReadPosRankSum=1.541;VQSLOD=3.0429;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,14:17:31.72:328,32,0	1/1:0,6:6:15.01:184,15,0	0/0:22,0:22:60.17:0,60,676	0/0:18,0:17:42.09:0,42,463	0/0:27,0:27:59.23:0,59,665	1/1:1,17:18:42.06:529,42,0	1/1:0,16:16:30.06:386,30,0	0/0:23,0:23:51.07:0,51,541	1/1:2,22:24:63.03:814,63,0	1/1:6,25:31:78.26:1055,78,0	1/1:2,24:26:57.45:672,57,0	1/1:1,15:16:39.13:525,39,0	1/1:2,21:23:57.06:721,57,0	1/1:0,17:17:45.06:573,45,0	0/0:31,0:31:62.24:0,62,700	0/0:21,0:21:39.07:0,39,443	1/1:2,11:13:27.05:348,27,0	1/1:0,12:12:33.11:450,33,0	1/1:5,7:12:21.07:286,21,0	1/1:1,19:20:54.01:641,54,0	0/0:23,0:23:63.18:0,63,714	1/1:3,23:26:45.15:615,45,0	1/1:1,14:15:33.07:430,33,0	1/1:0,18:18:40.71:474,41,0	1/1:0,22:22:57.02:695,57,0	0/0:26,0:26:69.20:0,69,783	0/0:44,0:44:99:0,123,1374	0/0:16,0:16:48.14:0,48,545
chr10	8021198	.	TA	T	216.11	PASS	AB=0.889;AC=5;AF=0.093;AN=54;BaseQRankSum=-0.114;DP=439;FS=1.113;HRun=1;HaplotypeScore=171.2653;InbreedingCoeff=-0.0565;MQ=41.67;MQ0=14;MQRankSum=-3.246;QD=3.00;ReadPosRankSum=-1.674;VQSLOD=-0.6921;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:19:11.78:0,12,163	0/0:4,0:4:3.01:0,3,46	./.	0/0:1,0:1:0:0,0,0	0/0:19,0:19:12.04:0,12,193	0/0:11,0:11:18.95:0,19,277	0/0:10,0:8:6.02:0,6,94	0/0:30,0:24:72.24:0,72,1063	0/0:8,0:8:9.03:0,9,135	0/1:15,5:20:99:155,0,517	0/0:15,4:18:9.82:0,10,142	0/1:8,4:11:85.63:86,0,260	0/0:24,0:23:53.66:0,54,686	0/0:16,0:14:23.90:0,24,318	0/0:21,0:21:27.09:0,27,415	0/0:17,0:17:14.82:0,15,213	0/1:11,0:10:27.68:28,0,103	0/1:15,2:16:37.48:37,0,469	0/0:3,0:3:9.03:0,9,135	0/0:11,0:10:14.99:0,15,182	0/0:19,0:18:48.58:0,49,591	0/0:21,0:20:23.61:0,24,278	0/0:11,1:11:20.90:0,21,292	0/0:9,0:8:2.93:0,3,45	0/1:12,0:12:24.68:25,0,151	0/0:31,0:30:87.24:0,87,1163	0/0:35,0:35:90.21:0,90,1086	0/0:23,0:22:57.17:0,57,781
chr10	8021207	.	AGAT	A	5989.99	PASS	AB=0.929;AC=42;AF=0.808;AN=52;BaseQRankSum=3.997;DP=454;FS=1.225;HRun=0;HaplotypeScore=178.3666;InbreedingCoeff=0.1924;MQ=41.31;MQ0=12;MQRankSum=3.127;QD=14.72;ReadPosRankSum=0.208;VQSLOD=4.5488;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:20:35.10:35,0,39	1/1:8,0:8:8.81:137,9,0	./.	./.	0/1:20,1:21:29.35:87,0,29	1/1:11,0:11:15.04:208,15,0	1/1:10,0:8:3:25,3,0	0/0:30,0:23:69.06:0,69,803	1/1:10,0:10:11.88:183,12,0	1/1:22,0:22:21.85:874,22,0	0/1:19,1:19:35.08:168,0,35	1/1:14,0:13:29.95:437,30,0	1/1:21,0:20:41.99:619,42,0	1/1:14,0:13:17.77:253,18,0	1/1:23,0:23:18.02:161,18,0	1/1:19,1:20:17.59:143,18,0	1/1:11,0:10:8.54:96,9,0	1/1:17,0:16:39.96:538,40,0	1/1:4,0:4:12.03:165,12,0	0/0:17,0:16:30.10:0,30,410	0/1:10,6:16:99:200,0,270	1/1:19,1:19:14.99:208,15,0	1/1:11,0:10:15.02:186,15,0	1/1:9,1:9:2.58:46,3,0	1/1:14,0:14:14.61:209,15,0	0/1:30,2:31:5.38:265,0,5	1/1:19,8:27:21.62:490,22,0	0/1:27,0:26:49.95:255,0,50
chr10	8021210	.	T	TA	6237.96	PASS	AB=0.774;AC=42;AF=0.808;AN=52;BaseQRankSum=3.935;DP=455;FS=1.265;HRun=1;HaplotypeScore=166.3534;InbreedingCoeff=0.1855;MQ=42.07;MQ0=12;MQRankSum=2.815;QD=15.14;ReadPosRankSum=-1.189;VQSLOD=4.3833;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:14,9:19:25:25,0,32	1/1:0,8:8:8.89:131,9,0	./.	./.	0/1:3,9:22:29.33:74,0,29	1/1:2,10:12:18.05:251,18,0	1/1:8,3:9:2.88:25,3,0	0/0:27,0:23:69.19:0,69,819	1/1:1,8:9:11.79:181,12,0	1/1:1,22:23:29.66:915,30,0	0/1:3,17:19:24.41:165,0,24	1/1:4,12:15:32.87:464,33,0	1/1:3,18:20:44.91:658,45,0	1/1:1,12:12:17.67:247,18,0	1/1:1,11:23:18.02:154,18,0	1/1:9,9:20:14.07:135,14,0	1/1:5,5:10:12.01:136,12,0	1/1:4,12:17:40.92:551,41,0	1/1:3,3:6:15.03:195,15,0	0/0:11,5:15:30.10:0,30,413	0/1:15,1:16:99:200,0,243	1/1:3,15:17:15.04:201,15,0	1/1:3,9:11:15.02:181,15,0	1/1:4,6:9:2.61:46,3,0	1/1:2,12:14:14.81:201,15,0	0/1:19,5:31:17.97:320,0,18	1/1:22,5:28:19.41:483,19,0	0/1:17,4:25:61.02:297,0,61
chr10	8021213	.	TA	T	761.56	PASS	AB=0.963;AC=8;AF=0.154;AN=52;BaseQRankSum=-1.823;DP=451;FS=0.000;HRun=1;HaplotypeScore=184.4701;InbreedingCoeff=0.1426;MQ=41.79;MQ0=12;MQRankSum=5.192;QD=4.98;ReadPosRankSum=2.842;VQSLOD=0.3030;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:19:18.98:19,0,39	0/0:8,0:8:7.79:0,8,50	./.	./.	0/0:19,2:21:3.89:0,4,78	0/0:15,0:15:26.78:0,27,272	0/1:10,0:8:0:0,0,0	0/0:28,0:23:63.18:0,63,886	0/0:8,0:8:8.98:0,9,71	0/0:24,0:24:68.29:0,68,536	0/0:21,0:20:17.79:0,18,177	0/0:16,0:15:34.19:0,34,287	0/0:20,0:19:39.35:0,39,240	0/0:12,0:11:14.57:0,15,90	0/0:23,0:23:2.79:0,3,66	0/1:20,1:21:7.81:17,0,8	0/0:10,0:9:8.88:0,9,72	0/0:18,0:17:37.46:0,37,230	0/0:6,0:6:17.89:0,18,179	0/0:16,0:15:30.10:0,30,479	0/1:16,0:16:99:114,0,295	0/0:18,0:17:16.17:0,16,149	0/0:11,0:10:14.88:0,15,132	0/0:10,0:9:2.96:0,3,20	0/0:13,0:13:11.87:0,12,85	0/1:26,5:30:51.76:237,0,52	1/1:23,5:28:15.63:365,16,0	0/1:23,1:23:99:138,0,113
chr10	8021217	.	TA	T	516.44	PASS	AB=0.850;AC=6;AF=0.115;AN=52;BaseQRankSum=0.930;DP=457;FS=0.604;HRun=1;HaplotypeScore=174.8861;InbreedingCoeff=0.0930;MQ=42.57;MQ0=16;MQRankSum=5.097;QD=4.27;ReadPosRankSum=-0.432;VQSLOD=-0.1086;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,2:18:10.37:0,10,98	0/0:8,0:8:9.03:0,9,122	./.	./.	0/0:17,6:23:5.98:0,6,96	0/0:15,0:15:24.97:0,25,356	0/0:10,0:8:3.01:0,3,44	0/0:31,0:27:81.24:0,81,1163	0/0:8,0:8:12.04:0,12,181	0/0:27,0:26:72.17:0,72,1009	0/0:20,0:19:18.85:0,19,277	0/0:16,0:15:36.07:0,36,515	0/0:22,0:21:48.15:0,48,670	0/0:14,0:13:21.06:0,21,286	0/0:15,7:22:6.90:0,7,97	0/1:13,9:21:42.15:85,0,42	0/0:11,0:10:12.01:0,12,146	0/0:17,0:16:16.50:0,17,479	0/0:5,0:5:12.51:0,13,167	0/0:15,0:14:33.10:0,33,504	0/1:10,5:15:99:101,0,294	0/0:16,0:15:17.93:0,18,259	0/0:10,0:9:15.05:0,15,233	0/0:9,0:8:3.01:0,3,44	0/0:12,0:12:12.04:0,12,183	0/1:29,2:30:99:101,0,141	1/1:20,8:28:6.49:314,6,0	0/1:25,0:24:35.23:35,0,209
chr10	8022095	.	AT	A	15365.11	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=9.545;DP=652;FS=4.358;HRun=7;HaplotypeScore=115.1453;InbreedingCoeff=0.9980;MQ=81.59;MQ0=0;MQRankSum=-4.743;QD=26.96;ReadPosRankSum=2.836;VQSLOD=4.3789;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,126,1585	1/1:1,14:15:39.09:398,39,0	0/0:21,0:21:51.04:0,51,569	0/0:13,0:13:26.92:0,27,310	1/1:2,22:24:66.14:673,66,0	1/1:0,15:15:36.08:367,36,0	1/1:2,14:16:36.08:367,36,0	1/1:2,18:20:51.08:513,51,0	1/1:2,28:30:84.19:856,84,0	1/1:0,18:18:54.12:551,54,0	1/1:0,14:14:38.83:379,39,0	1/1:2,24:26:60.13:612,60,0	1/1:0,29:29:84.19:857,84,0	1/1:3,21:24:60.11:611,60,0	1/1:4,22:26:60.14:612,60,0	1/1:3,24:27:72.15:734,72,0	1/1:1,26:27:72.16:734,72,0	1/1:0,16:16:45.10:459,45,0	1/1:3,25:28:75.10:750,75,0	1/1:1,25:26:72.12:724,72,0	1/1:7,27:34:96.12:944,96,0	1/1:1,20:21:57.12:581,57,0	1/1:1,24:25:65.93:673,66,0	1/1:2,22:24:63.13:643,63,0	1/1:1,19:20:57.13:581,57,0	1/1:3,31:34:93.19:949,93,0	1/1:2,20:22:57.12:581,57,0	1/1:0,9:9:21.05:214,21,0
chr10	8023958	.	C	CAAG	17225.58	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-15.830;DP=663;FS=1.321;HRun=0;HaplotypeScore=86.0802;InbreedingCoeff=0.9995;MQ=90.94;MQ0=0;MQRankSum=-6.464;QD=53.00;ReadPosRankSum=2.836;VQSLOD=7.2325;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:69.20:0,69,1055	1/1:0,11:11:30.10:662,30,0	0/0:33,0:33:81.29:0,81,1363	0/0:24,0:24:63.17:0,63,967	1/1:1,27:28:75.05:1482,75,0	1/1:1,21:22:60.21:1323,60,0	1/1:2,19:22:57.20:1256,57,0	1/1:3,20:23:60.18:1207,60,0	1/1:0,25:25:60.21:1323,60,0	0/0:30,0:30:87.30:0,87,1395	0/0:22,0:22:66.21:0,66,1035	0/0:24,0:24:66.23:0,66,1060	0/0:29,0:29:84.23:0,84,1276	0/0:23,0:23:66.23:0,66,1060	1/1:2,21:23:60.21:1322,60,0	1/1:0,10:10:27.09:594,27,0	1/1:1,22:25:60.21:1323,60,0	0/0:16,0:17:42.61:0,43,672	1/1:3,10:14:33.10:671,33,0	1/1:0,24:25:51.18:1123,51,0	0/0:27,0:27:75.23:0,75,1154	0/0:30,0:30:84.26:0,84,1323	0/0:22,0:22:60.19:0,60,939	0/0:33,0:33:90.31:0,90,1445	1/1:3,22:25:54.06:1190,54,0	1/1:1,22:24:24.05:1434,24,0	1/1:1,26:27:66.23:1455,66,0	1/1:1,17:21:39.13:860,39,0
chr10	8024664	.	G	GA	2503.14	PASS	AB=0.895;AC=18;AF=0.321;AN=56;BaseQRankSum=-7.948;DP=631;FS=0.813;HRun=13;HaplotypeScore=82.3264;InbreedingCoeff=0.4241;MQ=69.89;MQ0=0;MQRankSum=-0.865;QD=9.04;ReadPosRankSum=-3.579;VQSLOD=2.1683;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:25:36.47:0,36,129	0/1:11,0:11:2.36:2,0,102	0/1:18,0:14:24.49:24,0,27	0/1:12,0:12:4.31:4,0,33	1/1:9,28:39:51.96:559,52,0	0/0:27,1:29:20.69:0,21,268	0/0:10,1:15:4.97:0,5,153	1/1:11,21:35:54.91:454,55,0	0/0:20,1:21:6.99:0,7,183	0/0:28,0:28:47.43:0,47,326	0/0:31,1:33:39.52:0,40,407	0/0:10,0:12:1.02:0,1,110	0/1:15,4:19:44.90:45,0,163	0/0:19,0:19:38.60:0,39,263	1/1:9,10:19:3.78:302,4,0	1/1:8,8:16:0.44:138,0,0	0/1:22,2:27:9.06:9,0,197	0/0:18,0:18:26.60:0,27,185	0/0:16,0:16:32.62:0,33,222	0/0:20,0:23:43.57:0,44,292	0/0:2,0:15:24.44:0,24,72	0/0:22,1:25:26.67:0,27,313	0/0:27,1:28:25.56:0,26,317	0/0:19,1:23:20.72:0,21,266	0/0:20,1:24:16.68:0,17,235	1/1:15,24:39:45.31:522,45,0	1/1:12,21:34:42.25:505,42,0	0/1:3,5:8:20.15:114,0,20
chr10	8025349	.	CTTTG	C	9643.18	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=14.475;DP=621;FS=12.908;HRun=0;HaplotypeScore=100.8961;InbreedingCoeff=0.9848;MQ=70.48;MQ0=5;MQRankSum=-0.091;QD=26.94;ReadPosRankSum=3.418;VQSLOD=3.8669;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,18:24:45.15:737,45,0	1/1:1,6:7:18.06:285,18,0	0/0:25,0:18:12.04:0,12,255	0/0:18,0:17:24.08:0,24,537	1/1:10,15:25:39.13:625,39,0	1/1:5,16:21:30.10:491,30,0	1/1:7,16:23:35.90:572,36,0	1/1:15,19:34:57.06:733,57,0	1/1:3,9:12:18.06:295,18,0	0/0:31,0:31:69.19:0,69,1472	0/0:26,0:26:72.23:0,72,1606	0/0:16,0:16:39.12:0,39,873	0/0:20,0:20:48.14:0,48,1109	0/0:17,0:17:24.08:0,24,580	1/1:2,21:21:45.15:737,45,0	1/1:2,9:11:24.08:393,24,0	1/1:8,32:40:66.23:1080,66,0	0/0:19,0:19:39.11:0,39,864	1/1:13,12:25:36.03:530,36,0	1/1:8,17:25:39.13:638,39,0	0/0:20,0:20:29.64:0,30,962	0/0:26,0:26:66.22:0,66,1518	0/0:27,1:28:11.06:0,11,1292	0/0:17,0:17:36.12:0,36,856	1/1:6,15:21:30.10:491,30,0	1/1:6,23:28:63.20:1007,63,0	1/1:7,21:28:47.87:784,48,0	1/1:3,7:10:15.05:246,15,0
chr10	8026931	.	C	CGTGTGTGTGTGTGTGTGTGTG	36529.89	PASS	AB=1.000;AC=52;AF=0.929;AN=56;BaseQRankSum=-0.113;DP=590;FS=15.807;HRun=0;HaplotypeScore=361.6241;InbreedingCoeff=0.3861;MQ=62.28;MQ0=0;MQRankSum=-4.731;QD=63.86;ReadPosRankSum=3.217;VQSLOD=2.6221;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:31:9.03:678,9,0	1/1:5,0:5:3.01:212,3,0	0/1:31,0:24:1.69:2,0,675	0/0:18,0:17:21.07:0,21,741	1/1:18,0:25:10.29:720,10,0	1/1:31,0:30:17.47:1676,17,0	1/1:33,0:33:36.52:1425,37,0	1/1:27,0:27:40.67:1502,41,0	1/1:20,0:20:18.04:1130,18,0	1/1:25,0:28:54.08:2800,54,0	1/1:19,0:17:6.02:294,6,0	1/1:20,0:25:30.10:2098,30,0	1/1:15,0:15:30:1730,30,0	1/1:20,1:22:24.08:1934,24,0	0/1:24,0:24:2.62:2450,0,3	1/1:13,0:18:15.14:1498,15,0	1/1:13,0:13:15.05:962,15,0	1/1:14,0:20:11.27:1841,11,0	1/1:21,0:21:33.54:1492,34,0	1/1:13,0:13:3.01:55,3,0	1/1:15,0:15:1.63:256,2,0	1/1:21,0:25:24.08:2066,24,0	1/1:10,0:10:5.69:243,6,0	1/1:23,0:23:20.92:1756,21,0	1/1:12,0:12:5.54:329,6,0	1/1:19,0:22:54.11:2916,54,0	1/1:19,0:25:57.19:3792,57,0	1/1:12,0:16:15.05:675,15,0
chr10	8028270	.	T	TTGTGGCTAAA	16445.97	PASS	AB=0.838;AC=52;AF=0.963;AN=54;BaseQRankSum=1.014;DP=254;FS=15.723;HRun=0;HaplotypeScore=160.6644;InbreedingCoeff=-0.0518;MQ=77.21;MQ0=0;MQRankSum=-3.952;QD=64.75;ReadPosRankSum=1.627;VQSLOD=3.5400;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:15:42.11:970,42,0	1/1:1,0:1:3.01:47,3,0	0/1:12,1:14:99:515,0,196	0/1:5,0:8:54.51:340,0,55	1/1:9,0:9:24.04:440,24,0	1/1:10,0:10:26.79:595,27,0	1/1:10,0:10:27.09:832,27,0	1/1:12,0:12:33.11:998,33,0	1/1:6,0:6:15.05:337,15,0	1/1:11,0:11:31.90:719,32,0	1/1:10,0:10:27.06:557,27,0	1/1:12,0:12:33.04:724,33,0	1/1:4,0:4:12.04:323,12,0	1/1:12,0:12:36.11:793,36,0	1/1:14,0:14:39.10:993,39,0	1/1:8,0:8:21.04:447,21,0	1/1:5,0:5:15.05:324,15,0	1/1:6,0:6:15.05:497,15,0	1/1:9,0:9:27.09:769,27,0	1/1:9,0:9:24.08:552,24,0	1/1:5,0:5:12.04:348,12,0	1/1:9,0:9:24.08:602,24,0	1/1:5,0:5:12.01:211,12,0	1/1:6,0:6:15.52:298,16,0	1/1:14,0:14:42.14:1048,42,0	1/1:13,0:13:34.49:980,34,0	1/1:17,0:17:48.15:1188,48,0	./.
chr10	8028358	.	C	CAGCA	1329.90	PASS	AB=0.800;AC=47;AF=0.940;AN=50;BaseQRankSum=3.303;DP=113;FS=29.423;HRun=0;HaplotypeScore=72.5301;InbreedingCoeff=0.2391;MQ=37.25;MQ0=1;MQRankSum=-3.388;QD=12.20;ReadPosRankSum=0.982;VQSLOD=1.4425;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:0,0:1:2.94:18,3,0	1/1:0,0:3:8.36:39,8,0	0/1:3,1:3:11.98:12,0,47	0/0:4,0:2:6.01:0,6,56	1/1:0,0:9:17.75:65,18,0	1/1:0,0:7:19.63:91,20,0	1/1:0,0:2:5.60:26,6,0	1/1:0,0:3:8.96:69,9,0	1/1:0,0:5:11.19:51,11,0	1/1:0,0:6:17.96:150,18,0	1/1:0,0:5:12.94:50,13,0	1/1:0,0:3:5.60:26,6,0	1/1:0,0:3:5.54:25,6,0	1/1:0,0:4:11.02:48,11,0	1/1:0,0:5:13.78:60,14,0	1/1:0,0:5:14.24:71,14,0	1/1:0,0:1:2.96:19,3,0	1/1:0,0:1:2.98:21,3,0	./.	1/1:0,0:10:27.87:128,28,0	./.	1/1:0,0:5:10.38:42,10,0	1/1:0,0:5:12.88:49,13,0	./.	1/1:0,0:6:14.08:66,14,0	1/1:0,0:7:20.84:148,21,0	1/1:0,0:7:20.44:127,20,0	1/1:0,0:2:5.88:36,6,0
chr10	8028830	.	CT	C	803.64	PASS	AB=0.850;AC=20;AF=0.435;AN=46;BaseQRankSum=5.197;DP=306;FS=0.000;HRun=2;HaplotypeScore=36.9762;InbreedingCoeff=-0.5808;MQ=17.05;MQ0=191;MQRankSum=0.013;QD=3.32;ReadPosRankSum=3.300;VQSLOD=-0.0460;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:30,1:5:29.87:30,0,52	./.	./.	./.	0/0:3,0:3:3.01:0,3,41	0/1:6,4:7:65.02:134,0,65	0/1:17,5:12:99:158,0,171	0/1:28,3:10:89.61:90,0,204	0/1:9,2:8:53.07:53,0,165	0/1:7,1:5:23.89:24,0,128	0/1:5,1:3:32.73:33,0,35	0/1:6,2:4:29.83:30,0,52	0/1:9,3:5:29.82:30,0,74	0/1:6,1:4:29.80:30,0,74	0/1:9,5:8:99:131,0,121	0/1:4,1:3:32.83:33,0,35	0/0:12,1:2:6.02:0,6,83	0/0:20,0:3:9.03:0,9,123	0/1:14,1:5:26.86:27,0,96	0/0:2,0:1:3.01:0,3,41	./.	0/1:7,3:5:42.75:43,0,49	./.	1/1:17,1:1:3.01:39,3,0	0/0:2,0:1:2.97:0,3,20	0/1:10,1:7:23.83:24,0,146	0/1:11,1:6:23.66:24,0,129	1/1:11,0:1:2.37:8,2,0
chr10	8031827	.	GA	G	798.24	PASS	AB=0.839;AC=24;AF=0.429;AN=56;BaseQRankSum=-7.114;DP=585;FS=3.628;HRun=15;HaplotypeScore=74.1230;InbreedingCoeff=0.0345;MQ=37.20;MQ0=73;MQRankSum=2.546;QD=1.97;ReadPosRankSum=1.824;VQSLOD=-0.7095;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:50,7:48:99:128,0,155	1/1:6,2:7:5.70:37,6,0	0/0:27,0:5:3.07:0,3,11	0/1:23,1:13:3.07:3,0,76	0/1:19,1:12:10.41:10,0,17	0/1:17,2:18:49.63:52,0,50	0/1:16,7:21:38.78:81,0,39	0/1:45,1:11:26.99:29,0,27	0/1:15,5:19:23.92:72,0,24	1/1:11,0:6:1.48:4,1,0	0/0:7,0:7:0.97:0,1,10	0/0:17,0:10:19.21:0,19,85	0/0:15,0:14:3.39:0,3,31	0/0:18,0:15:11.34:0,11,73	1/1:4,0:12:5.76:17,6,0	1/1:7,1:15:14.47:52,14,0	1/1:25,13:35:4.90:143,5,0	0/0:15,0:13:22.21:0,22,112	0/1:14,6:13:28.67:104,0,29	1/1:18,3:14:4.44:62,4,0	0/0:13,0:5:2.44:0,2,12	0/0:8,0:5:3.99:0,4,15	0/0:12,0:5:2.80:0,3,13	0/0:13,0:10:19.27:0,19,86	0/1:8,7:12:14.49:90,0,14	0/0:12,0:9:2.36:0,2,29	0/1:15,1:11:9.19:34,0,9	1/1:9,1:8:7.76:42,8,0
chr10	8031835	.	A	AAC	2205.21	PASS	AB=0.854;AC=22;AF=0.393;AN=56;BaseQRankSum=1.971;DP=660;FS=0.000;HRun=0;HaplotypeScore=78.5808;InbreedingCoeff=-0.1652;MQ=46.66;MQ0=39;MQRankSum=-3.832;QD=5.00;ReadPosRankSum=4.410;VQSLOD=2.3117;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:57,5:53:99:232,0,703	0/0:8,0:6:11.25:0,11,85	0/1:45,0:14:4.96:5,0,136	0/1:40,0:17:62.87:63,0,142	0/1:19,7:18:61.71:74,0,62	0/1:18,4:21:99:123,0,209	0/1:14,12:25:99:234,0,183	0/0:34,0:17:8.44:0,8,144	0/0:21,0:20:29.86:0,30,274	0/0:17,0:8:17.85:0,18,134	1/1:8,2:8:0.69:43,1,0	1/1:12,10:13:2.28:304,2,0	0/1:17,7:17:77.17:113,0,77	0/1:15,10:18:28.91:211,0,29	0/0:19,0:16:14.47:0,14,104	0/0:18,0:14:19.24:0,19,160	0/0:37,1:35:5.49:0,5,359	0/1:11,6:12:18.34:301,0,18	0/0:21,0:14:40.17:0,40,351	0/0:22,2:18:16.15:0,16,164	0/1:19,1:8:36.07:55,0,36	0/1:12,1:6:10.94:70,0,11	1/1:10,5:6:3.01:43,3,0	1/1:5,10:11:21.07:324,21,0	0/0:19,0:13:30.02:0,30,290	0/1:14,4:16:66.48:66,0,176	0/1:17,3:12:69.63:70,0,84	0/1:17,0:11:40.13:40,0,48
chr10	8032204	.	TTAAA	T	132.75	PASS	AB=0.900;AC=5;AF=0.139;AN=36;BaseQRankSum=3.068;DP=458;FS=17.843;HRun=0;HaplotypeScore=26.3137;InbreedingCoeff=0.3436;MQ=23.95;MQ0=193;MQRankSum=-1.322;QD=4.74;ReadPosRankSum=-0.167;VQSLOD=-0.4315;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	0/0:29,0:8:12.04:0,12,245	1/1:4,6:6:6.02:119,6,0	./.	0/0:29,0:1:3.01:0,3,84	./.	0/0:27,0:11:27.09:0,27,659	0/0:17,0:5:3.01:0,3,84	0/0:19,0:6:3.01:0,3,84	0/0:19,0:6:9.50:0,10,240	0/0:29,0:16:21.07:0,21,537	0/0:13,0:7:9.50:0,10,252	0/0:22,0:10:9.97:0,10,253	1/1:7,2:5:2.96:59,3,0	0/0:23,0:8:6.02:0,6,168	./.	./.	./.	0/0:28,0:14:33.11:0,33,882	0/0:19,1:7:6.02:0,6,168	0/0:26,0:14:9.03:0,9,251	./.	0/0:25,0:10:27.09:0,27,745	0/0:20,0:7:15.05:0,15,419	0/1:8,1:3:53.87:54,0,78
chr10	8033027	.	G	GTTA	8561.45	PASS	AC=50;AF=0.926;AN=54;BaseQRankSum=-0.038;DP=246;FS=9.978;HRun=0;HaplotypeScore=50.2129;InbreedingCoeff=0.5634;MQ=67.97;MQ0=0;MQRankSum=-4.659;QD=37.72;ReadPosRankSum=3.859;VQSLOD=5.0075;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,12:17:27.09:509,27,0	1/1:0,2:2:3.01:63,3,0	0/0:8,0:7:15.05:0,15,211	0/0:9,0:8:15.05:0,15,202	1/1:2,5:7:15.05:281,15,0	1/1:3,8:11:21.07:391,21,0	./.	1/1:14,23:38:72.20:1214,72,0	1/1:1,5:6:15.05:315,15,0	1/1:5,2:7:15.04:264,15,0	1/1:8,4:12:20.87:384,21,0	1/1:1,2:3:6.02:126,6,0	1/1:0,2:2:6.02:126,6,0	1/1:0,1:1:3.01:63,3,0	1/1:0,4:4:12.04:252,12,0	1/1:1,1:2:3.01:63,3,0	1/1:3,13:16:30.10:630,30,0	1/1:4,9:13:27.09:568,27,0	1/1:4,9:13:30.09:550,30,0	1/1:1,8:9:21.07:388,21,0	1/1:0,2:2:6.02:91,6,0	1/1:2,2:4:6.02:126,6,0	1/1:2,7:9:9.02:190,9,0	1/1:0,4:4:9.03:190,9,0	1/1:6,11:17:30.09:595,30,0	1/1:3,2:5:12.01:186,12,0	1/1:5,11:16:48.01:806,48,0	1/1:2,5:7:9.03:190,9,0
chr10	8033066	.	TAGAGAGAG	T	1122.47	PASS	AB=1.000;AC=15;AF=0.326;AN=46;BaseQRankSum=3.135;DP=350;FS=2.747;HRun=0;HaplotypeScore=117.5490;InbreedingCoeff=0.5445;MQ=48.18;MQ0=17;MQRankSum=-1.093;QD=10.90;ReadPosRankSum=0.833;VQSLOD=2.1719;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:6.02:0,6,146	1/1:5,0:5:3.01:56,3,0	./.	./.	0/1:16,0:15:7.55:8,0,123	1/1:17,3:20:19.39:334,19,0	1/1:6,0:6:3.92:149,4,0	0/0:40,0:34:18.95:0,19,557	1/1:10,1:11:8.98:206,9,0	0/0:13,0:13:30.06:0,30,789	0/0:17,0:17:3.50:0,3,295	./.	0/0:7,0:6:0.47:0,0,1	1/1:5,0:4:2.37:8,2,0	0/0:8,0:8:3.48:0,3,59	./.	1/1:17,2:19:15.03:306,15,0	0/0:9,0:10:6.02:0,6,178	./.	0/0:12,0:13:0.47:0,0,1	0/0:6,0:5:6.02:0,6,191	0/0:7,0:6:3.01:0,3,53	0/0:7,0:6:2.73:0,3,53	0/0:6,0:4:3.01:0,3,112	1/1:14,4:18:12.02:203,12,0	0/0:9,0:8:18.06:0,18,648	0/0:18,0:18:24.08:0,24,623	0/0:12,0:10:19.62:0,20,577
chr10	8033168	.	GAGCCATCGCTC	G	14037.88	PASS	AB=0.611;AC=31;AF=0.554;AN=56;BaseQRankSum=15.236;DP=394;FS=64.764;HRun=0;HaplotypeScore=145.2691;InbreedingCoeff=0.8860;MQ=69.16;MQ0=0;MQRankSum=-12.950;QD=78.42;ReadPosRankSum=0.148;VQSLOD=2.4526;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:90.24:0,90,4744	0/0:7,0:7:21.07:0,21,1185	0/0:8,0:8:21.07:0,21,897	0/0:19,0:19:57.19:0,57,2692	1/1:3,8:11:21.07:749,21,0	0/0:22,0:22:66.23:0,66,3804	0/0:16,0:16:48.16:0,48,2754	1/1:9,28:35:69.11:1839,69,0	0/0:16,0:16:45.14:0,45,2295	0/1:4,7:11:99:677,0,149	1/1:0,13:13:36.12:1283,36,0	1/1:1,7:8:21.07:749,21,0	1/1:0,7:7:21.07:748,21,0	1/1:0,10:10:27.09:963,27,0	1/1:1,17:18:42.14:1497,42,0	1/1:1,3:4:6.02:214,6,0	0/0:33,0:33:99:0,99,5640	1/1:1,4:5:6.02:214,6,0	0/0:19,0:19:57.20:0,57,2986	0/0:9,0:9:21.07:0,21,1211	0/0:21,0:21:63.22:0,63,3582	1/1:0,7:7:21.07:748,21,0	1/1:1,8:9:27.09:962,27,0	1/1:0,7:7:11.56:427,12,0	0/0:13,0:13:39.13:0,39,2077	1/1:1,10:11:30.10:1049,30,0	1/1:0,15:16:42.14:1492,42,0	1/1:1,4:5:12.04:428,12,0
chr10	8034410	.	GCA	G	2024.99	PASS	AB=0.939;AC=31;AF=0.574;AN=54;BaseQRankSum=0.716;DP=646;FS=0.605;HRun=0;HaplotypeScore=94.2759;InbreedingCoeff=0.5081;MQ=64.68;MQ0=13;MQRankSum=1.720;QD=5.96;ReadPosRankSum=1.802;VQSLOD=2.9577;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:28,4:32:19.43:163,19,0	1/1:9,5:14:6.02:65,6,0	0/0:34,0:14:0:0,0,0	./.	1/1:10,1:15:6.01:65,6,0	1/1:8,3:11:3.01:32,3,0	1/1:18,4:28:34.87:269,35,0	1/1:34,0:34:2.94:21,3,0	1/1:7,10:20:29.74:287,30,0	0/0:22,1:23:0.56:0,1,274	0/0:16,0:16:6.02:0,6,87	0/0:32,0:34:44.36:0,44,476	0/0:14,0:21:14.80:0,15,182	0/0:24,0:32:13.05:0,13,180	1/1:9,10:20:17.86:176,18,0	1/1:9,10:21:26.72:246,27,0	1/1:11,14:25:23.87:240,24,0	0/1:11,1:18:20.48:20,0,58	0/1:17,3:20:17.53:34,0,18	1/1:9,7:16:15.04:162,15,0	0/0:23,0:24:26.13:0,26,232	0/0:28,0:29:0.38:0,0,234	0/0:13,0:17:2.41:0,2,26	0/0:23,0:35:27.03:0,27,288	1/1:10,6:16:14.83:143,15,0	1/1:20,5:25:22.72:208,23,0	1/1:10,3:13:3.01:32,3,0	0/1:9,0:9:23.56:40,0,24
chr10	8035228	.	TCCTATTA	T	20655.51	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=13.288;DP=589;FS=4.939;HRun=0;HaplotypeScore=167.3997;InbreedingCoeff=0.9862;MQ=80.04;MQ0=0;MQRankSum=-18.796;QD=58.18;ReadPosRankSum=4.634;VQSLOD=4.4629;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,18:22:42.10:1047,42,0	1/1:1,7:8:18.06:474,18,0	0/0:29,0:29:87.24:0,87,2972	0/0:13,0:13:36.12:0,36,1203	0/0:38,0:38:99:0,108,4338	1/1:1,20:21:42.14:1106,42,0	1/1:2,23:25:48.16:1264,48,0	0/0:34,0:34:96.33:0,96,3449	1/1:0,18:18:48.16:1264,48,0	1/1:3,24:27:69.24:1818,69,0	1/1:0,23:23:66.23:1739,66,0	1/1:0,15:15:39.13:1027,39,0	1/1:3,12:15:33.11:869,33,0	1/1:1,17:18:51.18:1343,51,0	0/0:29,0:29:87.30:0,87,3418	0/0:21,0:21:60.19:0,60,2326	1/1:3,17:20:45.15:1186,45,0	1/1:0,5:5:12.04:316,12,0	1/1:4,17:21:51.16:1252,51,0	1/1:1,31:32:69.24:1818,69,0	1/1:3,9:12:12.04:317,12,0	1/1:1,26:27:54.19:1423,54,0	1/1:1,16:17:38.92:1027,39,0	1/1:2,17:19:30.01:732,30,0	1/1:0,10:10:24.08:632,24,0	0/0:29,0:29:84.29:0,84,3323	0/0:36,0:36:99:0,108,4285	0/0:5,0:5:15.05:0,15,529
chr10	8035984	.	C	CCTGTAACTGGATTCCATTATGGAA	2352.73	PASS	AB=0.661;AC=26;AF=0.929;AN=28;BaseQRankSum=-2.724;DP=44;FS=13.945;HRun=0;HaplotypeScore=35.9784;InbreedingCoeff=-0.1818;MQ=133.43;MQ0=0;MQRankSum=-1.346;QD=63.59;ReadPosRankSum=-1.910;VQSLOD=0.5209;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	1/1:1,0:1:2.98:21,3,0	0/1:2,1:8:22.36:1183,0,22	0/1:2,0:3:0.12:230,0,0	1/1:1,0:1:3.01:73,3,0	./.	1/1:2,0:2:5.99:62,6,0	1/1:4,0:4:9.03:190,9,0	1/1:3,0:3:8.99:120,9,0	./.	./.	./.	1/1:2,0:2:3:25,3,0	./.	./.	1/1:4,0:4:11.91:133,12,0	./.	./.	1/1:5,0:5:9.03:211,9,0	1/1:1,0:1:3.01:73,3,0	./.	./.	./.	1/1:1,0:1:3.01:43,3,0	./.	./.	1/1:1,0:1:2.97:20,3,0	1/1:1,0:1:3.01:50,3,0
chr10	8040423	.	CT	C	7565.11	PASS	AB=0.975;AC=48;AF=0.857;AN=56;BaseQRankSum=-1.293;DP=627;FS=1.668;HRun=1;HaplotypeScore=246.6741;InbreedingCoeff=-0.1579;MQ=72.24;MQ0=0;MQRankSum=-3.278;QD=12.07;ReadPosRankSum=9.736;VQSLOD=2.9433;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:31,0:30:37.77:238,0,38	1/1:9,0:9:8.36:124,8,0	0/1:16,2:18:43.42:43,0,174	0/1:24,3:27:28.24:28,0,181	1/1:31,0:31:73.15:446,73,0	1/1:21,0:21:49.74:303,50,0	1/1:19,0:18:46.53:274,47,0	1/1:33,0:33:86.87:411,87,0	1/1:29,0:29:27.29:390,27,0	1/1:29,0:29:15.70:283,16,0	1/1:28,1:29:72.84:436,73,0	1/1:18,1:19:15.02:267,15,0	1/1:31,0:30:14.16:373,14,0	1/1:26,0:26:39.39:385,39,0	0/1:24,0:24:21.47:290,0,21	1/1:17,0:17:11.21:226,11,0	1/1:18,0:18:37.91:221,38,0	0/1:9,0:8:0.71:70,0,1	0/1:19,0:19:35.84:149,0,36	1/1:22,0:22:61.37:374,61,0	0/1:9,0:9:7.03:40,0,7	1/1:28,0:28:81.92:504,82,0	1/1:28,0:28:31.41:333,31,0	0/1:17,0:17:18.17:127,0,18	1/1:15,0:15:40.74:238,41,0	1/1:31,0:31:67.44:428,67,0	1/1:31,0:31:65.04:444,65,0	1/1:7,0:7:20.43:117,20,0
chr10	8041797	.	TGTGCGTGTGTGTGTTTGTGTGTGTGTGCACGCAC	T	94.40	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.333;DP=722;FS=4.707;HRun=0;HaplotypeScore=501.4748;InbreedingCoeff=0.7918;MQ=60.82;MQ0=19;MQRankSum=0.734;QD=7.26;ReadPosRankSum=-2.322;VQSLOD=0.0214;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,106,15358	0/0:12,0:12:36.12:0,36,4630	0/0:59,0:21:38.62:0,39,2792	0/0:70,0:23:44.20:0,44,2241	0/0:34,0:34:93.26:0,93,11518	0/0:30,0:30:84.29:0,84,10461	0/0:19,0:18:48.15:0,48,5362	0/0:29,0:29:84.19:0,84,5916	0/0:16,0:16:45.12:0,45,4836	0/0:32,0:32:96.33:0,96,11286	0/0:30,0:30:87.30:0,87,11168	0/0:10,0:10:27.56:0,28,3735	0/0:12,0:12:36.12:0,36,5018	0/0:13,0:13:39.13:0,39,4889	0/0:17,0:17:51.17:0,51,5798	0/0:12,0:12:33.11:0,33,4100	0/0:29,0:28:78.21:0,78,8997	0/0:13,0:13:39.13:0,39,3619	0/0:21,0:20:60.14:0,60,4149	0/0:38,0:38:99:0,111,12233	1/1:0,13:13:3.01:172,3,0	0/0:25,0:25:75.24:0,75,9709	0/0:28,0:28:81.28:0,81,9937	0/0:21,0:21:63.13:0,63,5923	0/0:26,0:26:78.26:0,78,8738	0/0:28,0:28:81.28:0,81,10814	0/0:27,0:27:72.22:0,72,8246	0/0:12,0:12:30.10:0,30,2773
chr10	8042418	.	GT	G	1610.39	PASS	AC=28;AF=1.000;AN=28;DP=118;FS=0.000;HRun=5;HaplotypeScore=54.0362;InbreedingCoeff=-0.0811;MQ=19.66;MQ0=63;QD=20.65;VQSLOD=2.6802;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	1/1:0,3:3:9.02:99,9,0	./.	./.	1/1:1,11:11:24.06:253,24,0	./.	./.	./.	./.	1/1:0,9:9:27.08:316,27,0	1/1:0,3:3:9.02:96,9,0	./.	1/1:2,2:2:6.02:64,6,0	./.	1/1:3,1:1:3.01:33,3,0	./.	1/1:6,1:1:3.01:33,3,0	./.	./.	1/1:2,8:8:24.06:262,24,0	./.	1/1:2,2:2:6.01:64,6,0	1/1:1,5:5:15.04:160,15,0	./.	1/1:0,2:2:6.02:66,6,0	1/1:0,4:4:12.04:138,12,0	1/1:3,1:1:3.01:33,3,0	1/1:4,2:2:6.02:68,6,0
chr10	8042664	.	C	CA	701.87	PASS	AC=18;AF=1.000;AN=18;BaseQRankSum=-1.281;DP=112;FS=0.000;HRun=1;HaplotypeScore=88.8461;MQ=13.34;MQ0=87;MQRankSum=0.829;QD=23.40;ReadPosRankSum=1.432;VQSLOD=3.6482;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	1/1:0,2:2:6.01:73,6,0	./.	./.	1/1:0,2:2:5.97:63,6,0	./.	./.	./.	./.	1/1:1,1:1:3.01:45,3,0	1/1:0,3:3:2.27:83,2,0	./.	./.	./.	./.	./.	./.	./.	./.	1/1:0,8:8:17.36:168,17,0	./.	1/1:1,2:2:6.02:87,6,0	1/1:1,2:2:3.01:45,3,0	./.	1/1:1,4:4:12.04:165,12,0	1/1:1,1:1:3.01:45,3,0	./.	./.
chr10	8042703	.	CT	C	223.19	PASS	AC=14;AF=1.000;AN=14;BaseQRankSum=1.393;DP=101;FS=0.000;HRun=1;HaplotypeScore=55.4034;MQ=9.13;MQ0=91;MQRankSum=0.000;QD=13.95;ReadPosRankSum=-0.696;VQSLOD=2.3032;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	1/1:0,2:2:1.51:28,2,0	./.	./.	./.	./.	./.	./.	./.	1/1:1,2:2:5.95:55,6,0	1/1:1,1:1:3.01:36,3,0	./.	./.	./.	./.	./.	./.	./.	./.	1/1:1,2:2:6.02:68,6,0	./.	1/1:2,1:1:3.01:35,3,0	1/1:1,1:1:3.01:38,3,0	./.	1/1:0,1:1:3.01:32,3,0	./.	./.	./.
chr10	8042849	.	GTTTTTTGGTTGTTTGTTTGGTTTTTTTTTT	G	18634.13	PASS	AC=50;AF=0.926;AN=54;BaseQRankSum=7.279;DP=260;FS=72.375;HRun=0;HaplotypeScore=254.5618;InbreedingCoeff=0.6491;MQ=69.75;MQ0=21;MQRankSum=-3.015;QD=100.18;ReadPosRankSum=7.613;VQSLOD=1.5694;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,4:10:18.01:610,18,0	1/1:0,2:2:6.02:465,6,0	0/0:35,0:18:47.84:0,48,1302	0/0:35,0:15:29.96:0,30,603	1/1:4,3:6:18.02:669,18,0	1/1:7,4:10:21.04:898,21,0	1/1:4,2:5:12.02:246,12,0	./.	1/1:3,6:9:18.03:1183,18,0	1/1:2,2:4:12.04:588,12,0	1/1:3,2:5:12.02:544,12,0	1/1:7,7:12:27.07:1357,27,0	1/1:3,5:7:18.06:1394,18,0	1/1:7,7:13:30.10:1462,30,0	1/1:8,0:7:21.07:420,21,0	1/1:3,6:9:18.02:802,18,0	1/1:5,0:5:8.93:103,9,0	1/1:1,1:2:2.96:232,3,0	1/1:5,1:6:18.05:506,18,0	1/1:4,7:11:27.04:1370,27,0	1/1:4,3:4:6.02:290,6,0	1/1:6,4:10:27.05:1137,27,0	1/1:5,4:9:21.05:895,21,0	1/1:3,1:3:4.50:254,4,0	1/1:4,5:9:27.07:1358,27,0	1/1:3,4:7:21.07:1094,21,0	1/1:3,1:4:6.02:293,6,0	1/1:1,3:3:6.02:465,6,0
chr10	8042850	.	T	TCA	4067.64	PASS	AB=0.667;AC=49;AF=0.907;AN=54;BaseQRankSum=6.625;DP=249;FS=50.474;HRun=0;HaplotypeScore=187.8818;InbreedingCoeff=0.6297;MQ=70.95;MQ0=23;MQRankSum=-4.806;QD=23.51;ReadPosRankSum=5.705;VQSLOD=1.8087;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,5:9:14.52:166,15,0	1/1:2,0:2:5.91:39,6,0	0/0:39,0:18:19.25:0,19,246	0/0:37,0:15:19.64:0,20,291	1/1:4,3:6:17.89:222,18,0	1/1:4,5:8:20.91:218,21,0	1/1:3,3:5:12.03:157,12,0	./.	1/1:6,1:7:17.79:155,18,0	1/1:2,2:4:11.99:115,12,0	1/1:2,2:4:11.90:126,12,0	1/1:9,4:11:26.80:246,27,0	1/1:7,0:6:17.66:111,18,0	1/1:7,6:12:29.58:252,30,0	1/1:1,8:7:21.06:229,21,0	1/1:6,3:9:17.90:208,18,0	1/1:0,4:4:9.02:147,9,0	0/1:1,1:2:1.06:18,0,1	1/1:1,5:6:17.99:210,18,0	1/1:7,3:10:26.80:280,27,0	1/1:5,2:4:8.97:88,9,0	1/1:4,5:10:26.06:261,26,0	1/1:4,4:8:20.86:208,21,0	1/1:1,2:3:5.87:76,6,0	1/1:5,4:9:26.81:248,27,0	1/1:5,3:7:20.89:188,21,0	1/1:1,1:2:5.95:54,6,0	1/1:4,0:3:5.95:43,6,0
chr10	8043285	.	GTTGCCACCTCAGTT	G	501.54	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.725;DP=562;FS=3.994;HRun=0;HaplotypeScore=202.8142;InbreedingCoeff=0.9514;MQ=59.15;MQ0=5;MQRankSum=-3.525;QD=45.59;ReadPosRankSum=-1.377;VQSLOD=3.2629;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,138,8916	0/0:6,0:6:15.02:0,15,795	0/0:21,0:14:42.14:0,42,2424	0/0:22,0:15:45.15:0,45,2681	0/0:18,0:18:42.14:0,42,2539	0/0:24,0:24:72.25:0,72,4546	0/0:13,0:13:36.12:0,36,2322	0/0:20,0:20:57.20:0,57,3159	0/0:25,0:25:75.26:0,75,4775	0/0:24,0:24:72.25:0,72,4879	0/0:22,0:22:60.19:0,60,3722	0/0:17,0:17:48.16:0,48,3202	0/0:25,0:25:75.26:0,75,4858	0/0:16,0:16:42.14:0,42,2786	0/0:27,0:27:81.28:0,81,5251	0/0:20,0:19:57.20:0,57,3802	0/0:37,0:37:99:0,111,7003	0/0:20,0:20:60.21:0,60,4041	0/0:22,0:19:54.18:0,54,3474	0/0:17,0:17:48.15:0,48,3028	1/1:3,8:11:15.04:590,15,0	0/0:11,0:11:26.99:0,27,1737	0/0:13,0:13:33.10:0,33,2021	0/0:30,0:30:90.29:0,90,5868	0/0:17,0:17:42.14:0,42,2672	0/0:20,0:20:60.21:0,60,3915	0/0:11,0:11:30.10:0,30,1822	0/0:5,0:5:15.05:0,15,894
chr10	8043516	.	A	ATATATATATATATATG	669.52	PASS	AB=1.000;AC=21;AF=0.553;AN=38;BaseQRankSum=0.185;DP=135;FS=8.787;HRun=0;HaplotypeScore=46.3647;InbreedingCoeff=0.3374;MQ=82.21;MQ0=4;MQRankSum=0.522;QD=10.30;ReadPosRankSum=-0.354;VQSLOD=-0.3446;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:3:6:0,6,138	1/1:1,0:1:2.98:22,3,0	1/1:19,0:5:0.45:11,0,0	0/0:35,0:14:8.37:0,8,109	./.	1/1:4,0:4:1.55:4,2,0	1/1:2,0:2:3:25,3,0	0/0:10,0:7:12.01:0,12,109	1/1:4,0:4:5.83:38,6,0	./.	./.	./.	0/0:2,0:2:2.99:0,3,23	./.	0/1:1,0:1:0:0,0,0	./.	1/1:7,3:15:3.01:230,3,0	0/1:7,0:7:10.55:385,0,11	1/1:3,0:3:0.19:23,0,0	1/1:1,0:1:3:25,3,0	./.	./.	0/1:2,0:2:0:0,0,0	./.	1/1:6,0:6:2.99:23,3,0	0/0:3,0:3:3.89:0,4,28	0/0:1,0:1:2.99:0,3,24	0/0:3,0:3:5.66:0,6,48
chr10	8044460	.	GAGA	G	3848.70	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=12.108;DP=554;FS=11.552;HRun=0;HaplotypeScore=72.5701;InbreedingCoeff=0.9969;MQ=57.52;MQ0=1;MQRankSum=1.926;QD=33.47;ReadPosRankSum=2.215;VQSLOD=3.7132;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:57.15:0,57,1223	0/0:14,0:14:42.14:0,42,902	0/0:27,0:15:30.10:0,30,628	0/0:26,0:14:42.14:0,42,859	1/1:0,22:22:60.20:928,60,0	0/0:23,0:23:66.23:0,66,1418	0/0:20,0:20:54.19:0,54,1160	1/1:6,23:26:27.09:416,27,0	0/0:21,0:21:63.22:0,63,1353	0/0:21,0:21:63.22:0,63,1354	0/0:25,0:25:72.25:0,72,1542	0/0:17,0:17:48.16:0,48,1031	0/0:18,0:18:48.16:0,48,1029	0/0:13,0:13:33.11:0,33,708	1/1:0,11:11:24.08:371,24,0	1/1:0,11:11:27.09:418,27,0	0/0:16,0:16:42.14:0,42,889	0/0:17,0:17:51.18:0,51,1095	0/0:22,1:21:16.81:0,17,1234	0/0:30,0:30:84.29:0,84,1787	0/0:16,0:16:39.13:0,39,838	0/0:26,0:26:66.23:0,66,1418	0/0:22,0:22:66.23:0,66,1388	0/0:18,0:18:48.16:0,48,1031	0/0:22,0:22:66.23:0,66,1418	1/1:1,12:13:36.12:555,36,0	1/1:2,18:20:48.16:743,48,0	1/1:0,9:9:27.09:418,27,0
chr10	8045070	.	A	AT	3032.64	PASS	AB=0.722;AC=16;AF=0.286;AN=56;BaseQRankSum=-6.247;DP=447;FS=3.232;HRun=10;HaplotypeScore=69.1331;InbreedingCoeff=0.8309;MQ=63.01;MQ0=3;MQRankSum=-0.154;QD=18.95;ReadPosRankSum=-2.086;VQSLOD=3.8476;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:8,18:25:42.11:448,42,0	0/0:0,0:6:12.22:0,12,35	0/0:9,0:6:8.99:0,9,74	0/0:16,0:15:13.75:0,14,158	1/1:8,13:20:38.99:389,39,0	0/0:1,0:13:20.37:0,20,59	0/0:0,0:5:8.15:0,8,24	1/1:5,22:22:34.59:531,35,0	0/0:4,0:12:16.28:0,16,47	0/0:21,0:21:44.92:0,45,368	0/0:17,0:17:44.94:0,45,369	0/0:14,0:14:23.93:0,24,197	0/0:12,0:12:32.96:0,33,271	0/0:15,0:15:41.94:0,42,345	0/1:4,7:11:0.58:200,0,1	1/1:3,10:13:30.08:320,30,0	0/0:4,0:20:30.55:0,31,88	0/0:8,0:8:11.98:0,12,99	0/0:6,0:13:18.32:0,18,53	0/0:3,0:20:24.90:0,25,72	0/1:8,2:10:37:37,0,145	0/0:14,0:15:37.98:0,38,301	0/0:30,0:30:59.87:0,60,493	0/0:16,0:17:34.97:0,35,274	0/0:0,0:17:26.47:0,26,76	1/1:9,15:23:29.46:508,29,0	1/1:0,17:17:48.12:512,48,0	1/1:0,11:11:27.07:288,27,0
chr10	8047056	.	C	CTT	15851.09	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-14.457;DP=568;FS=1.100;HRun=2;HaplotypeScore=57.5196;InbreedingCoeff=0.9753;MQ=54.93;MQ0=15;MQRankSum=6.527;QD=47.89;ReadPosRankSum=3.386;VQSLOD=4.7317;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:66.21:0,66,951	1/1:0,8:8:21.07:393,21,0	0/0:22,0:5:6.02:0,6,83	0/0:18,0:4:9.03:0,9,131	0/0:25,0:25:72.24:0,72,1059	1/1:1,19:20:54.14:973,54,0	1/1:1,21:23:51.17:953,51,0	0/0:35,0:29:78.22:0,78,1092	1/1:0,16:16:42.14:787,42,0	1/1:1,33:34:96.33:1798,96,0	1/1:1,15:16:45.07:770,45,0	1/1:0,20:20:54.19:1012,54,0	1/1:1,15:16:36.06:674,36,0	1/1:1,12:13:36.12:674,36,0	0/0:24,0:24:69.22:0,69,997	0/0:7,0:7:21.06:0,21,289	1/1:1,18:19:54.19:1011,54,0	1/1:0,24:25:72.25:1348,72,0	1/1:5,16:16:42.14:787,42,0	1/1:1,25:26:75.19:1334,75,0	0/0:23,0:23:63.19:0,63,927	1/1:1,20:21:60.17:1088,60,0	1/1:1,22:23:54.19:1012,54,0	1/1:2,13:16:33.09:618,33,0	1/1:1,12:13:33.11:618,33,0	0/0:23,0:22:60.17:0,60,815	0/0:26,0:26:72.24:0,72,1055	0/0:11,0:11:33.11:0,33,485
chr10	8051281	.	T	TA	19451.34	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=8.157;DP=664;FS=2.456;HRun=0;HaplotypeScore=146.0477;InbreedingCoeff=0.9677;MQ=88.21;MQ0=0;MQRankSum=-12.069;QD=31.94;ReadPosRankSum=7.100;VQSLOD=4.1321;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,32:33:90.19:1207,90,0	1/1:0,7:7:21.07:289,21,0	0/0:24,0:24:72.15:0,72,915	0/0:31,0:31:90.12:0,90,1169	1/1:1,25:26:54.11:722,54,0	1/1:1,26:27:60.20:837,60,0	1/1:2,25:27:51.17:694,51,0	1/1:2,30:32:90.07:1033,90,0	1/1:0,25:25:57.19:777,57,0	1/1:2,33:35:99:1330,100,0	1/1:1,24:25:66.16:871,66,0	1/1:1,21:22:57.19:776,57,0	1/1:0,20:20:54.14:719,54,0	1/1:2,31:34:71.91:911,72,0	1/1:0,20:20:60.20:834,60,0	1/1:0,14:14:36.12:491,36,0	1/1:0,18:18:42.07:556,42,0	1/1:1,12:13:24.08:336,24,0	1/1:2,20:22:53.89:661,54,0	1/1:2,27:29:60.18:812,60,0	1/1:1,16:17:44.87:530,45,0	1/1:2,22:24:51.06:688,51,0	1/1:2,23:25:50.92:686,51,0	1/1:1,28:29:54.02:732,54,0	1/1:1,16:17:39.13:532,39,0	1/1:6,34:40:99:1474,111,0	1/1:0,20:19:60.20:826,60,0	1/1:2,6:8:9.03:127,9,0
chr10	8051954	.	ACG	A	5675.24	PASS	AB=0.916;AC=43;AF=0.768;AN=56;BaseQRankSum=-6.258;DP=652;FS=9.943;HRun=0;HaplotypeScore=157.9431;InbreedingCoeff=0.2018;MQ=57.07;MQ0=16;MQRankSum=-0.464;QD=10.36;ReadPosRankSum=0.714;VQSLOD=4.1384;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:38,1:38:1.15:398,1,0	1/1:10,1:11:23.95:206,24,0	0/0:29,0:6:8.86:0,9,82	0/0:51,0:18:0.72:0,1,69	0/1:26,0:24:15.34:37,0,15	0/1:6,22:28:26.24:130,0,26	1/1:21,4:25:51.34:482,51,0	1/1:24,0:24:30.86:386,31,0	1/1:3,22:23:31.64:398,32,0	1/1:31,0:31:74.50:620,74,0	1/1:15,0:15:6.88:52,7,0	1/1:25,0:25:20.72:156,21,0	1/1:23,0:23:26.96:222,27,0	1/1:21,0:21:42.39:351,42,0	0/1:14,3:17:19.72:88,0,20	0/1:16,0:16:6.39:121,0,6	1/1:5,33:36:41.84:493,42,0	1/1:13,0:13:11.99:100,12,0	1/1:4,18:22:54.69:491,55,0	1/1:4,24:28:29.99:374,30,0	0/0:23,0:22:5.74:0,6,38	1/1:21,0:21:11.98:98,12,0	1/1:20,0:20:5.95:43,6,0	0/1:25,0:25:0.03:0,0,0	1/1:1,15:16:12.04:165,12,0	0/1:21,0:21:8.34:160,0,8	0/1:11,0:11:13.71:58,0,14	1/1:7,0:7:4.70:46,5,0
chr10	8051956	.	G	GCA	1138.71	PASS	AB=0.798;AC=13;AF=0.232;AN=56;BaseQRankSum=-2.415;DP=652;FS=5.050;HRun=0;HaplotypeScore=179.7870;InbreedingCoeff=0.5199;MQ=56.22;MQ0=16;MQRankSum=-0.925;QD=6.66;ReadPosRankSum=-0.706;VQSLOD=2.7305;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:64.83:0,65,780	0/0:12,0:12:14.83:0,15,183	0/0:28,0:6:3.27:0,3,131	0/0:51,0:16:31.84:0,32,324	0/1:8,18:25:1.99:197,0,2	0/0:27,0:27:20.54:0,21,169	0/0:23,0:23:51.76:0,52,439	0/1:24,0:24:19.03:39,0,19	0/0:25,0:23:13.75:0,14,166	0/0:35,0:35:80.48:0,80,717	0/0:14,0:14:5.90:0,6,47	0/0:24,0:24:20.22:0,20,166	0/0:25,0:25:29.73:0,30,248	0/0:21,0:21:35.21:0,35,415	1/1:9,10:19:15.48:363,15,0	0/1:11,4:15:0.39:243,0,0	0/0:37,0:35:43.59:0,44,279	0/0:13,0:13:12:0,12,107	0/0:21,0:21:42.64:0,43,452	0/0:28,0:28:29.86:0,30,177	1/1:22,0:20:5.04:38,5,0	0/0:21,0:21:11.98:0,12,107	0/0:21,0:21:5.99:0,6,55	0/1:26,0:26:0:0,0,0	0/0:16,0:16:11.50:0,12,59	1/1:16,4:20:7.94:256,8,0	0/1:4,7:11:7.31:111,0,7	1/1:2,5:7:1.94:43,2,0
chr10	8051958	.	GCGCACA	G	5199.67	PASS	AB=0.913;AC=28;AF=0.500;AN=56;BaseQRankSum=-6.420;DP=654;FS=9.101;HRun=0;HaplotypeScore=184.9676;InbreedingCoeff=-0.0407;MQ=56.05;MQ0=17;MQRankSum=-1.415;QD=11.18;ReadPosRankSum=-3.523;VQSLOD=2.6751;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:39,0:38:99:363,0,535	0/1:12,0:13:61.56:62,0,108	0/0:27,0:6:6.80:0,7,85	0/0:50,0:15:8.38:0,8,207	0/1:26,0:24:23.69:24,0,234	0/0:25,1:27:5.61:0,6,225	0/1:20,0:23:71.88:275,0,72	0/1:25,0:25:99:289,0,163	0/1:24,1:23:39.94:40,0,277	1/1:2,30:35:86.75:1287,87,0	1/1:1,12:14:6.82:147,7,0	0/1:4,19:24:6.61:384,0,7	1/1:1,22:23:27.09:653,27,0	1/1:15,3:22:8.52:531,9,0	0/0:18,0:18:18.41:0,18,503	0/1:15,0:15:65.19:65,0,319	0/1:35,0:35:13.24:13,0,329	1/1:0,13:14:12.04:272,12,0	0/1:20,0:21:99:242,0,131	0/0:26,1:27:13.69:0,14,273	0/0:24,0:22:5.85:0,6,83	1/1:2,15:20:12.04:250,12,0	1/1:1,19:22:5.79:136,6,0	0/1:1,23:25:0:0,0,0	0/0:16,0:16:12.03:0,12,123	0/1:21,0:21:99:108,0,452	0/1:13,0:13:21.32:21,0,324	0/1:7,0:7:38.71:39,0,46
chr10	8052447	.	GACACACACACACACAC	G	7002.54	PASS	AB=0.801;AC=46;AF=0.821;AN=56;BaseQRankSum=-0.750;DP=408;FS=12.485;HRun=0;HaplotypeScore=171.7663;InbreedingCoeff=0.3647;MQ=64.93;MQ0=16;MQRankSum=-0.135;QD=21.22;ReadPosRankSum=3.709;VQSLOD=3.0367;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:19:11.61:0,12,64	1/1:3,4:7:9.03:305,9,0	0/0:35,0:13:5.99:0,6,69	0/1:37,0:25:2.08:2,0,202	1/1:5,5:9:11.86:100,12,0	0/1:13,11:24:3.68:486,0,4	1/1:9,8:17:17.99:397,18,0	1/1:13,0:10:11.80:88,12,0	1/1:8,3:13:15.05:466,15,0	1/1:6,5:12:21.03:507,21,0	1/1:6,2:8:9.03:128,9,0	1/1:4,3:7:9.03:286,9,0	1/1:11,7:18:17.01:445,17,0	0/1:6,3:10:24.85:173,0,25	1/1:5,4:8:14.81:273,15,0	1/1:7,5:11:13.37:366,13,0	1/1:5,4:9:9.03:250,9,0	1/1:3,2:6:5.23:140,5,0	0/1:10,2:12:20.66:255,0,21	1/1:13,6:19:0.41:234,0,0	0/0:14,0:23:9.03:0,9,196	1/1:7,7:14:12.03:141,12,0	1/1:10,5:14:18.06:330,18,0	1/1:10,0:9:9.03:138,9,0	1/1:4,5:9:12.04:151,12,0	1/1:6,5:11:12.04:532,12,0	1/1:8,6:13:0.53:486,1,0	1/1:3,2:5:9.03:323,9,0
chr10	8052474	.	ACACACAC	A	1345.62	PASS	AB=0.939;AC=23;AF=0.411;AN=56;BaseQRankSum=8.710;DP=348;FS=26.177;HRun=0;HaplotypeScore=143.0464;InbreedingCoeff=-0.2740;MQ=34.59;MQ0=17;MQRankSum=-2.782;QD=6.17;ReadPosRankSum=8.561;VQSLOD=0.2267;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:12.75:0,13,131	1/1:6,0:6:5.61:86,6,0	0/0:6,0:1:3:0,3,27	0/0:8,0:2:6.02:0,6,84	0/0:17,0:17:5.89:0,6,60	0/1:22,0:21:35.73:86,0,36	1/1:10,0:10:6.02:86,6,0	0/0:13,0:10:27.09:0,27,339	1/1:7,0:8:0.30:96,0,0	0/1:16,1:17:99:162,0,286	1/1:7,1:8:1.98:20,2,0	0/1:13,0:13:67.08:69,0,67	0/1:12,1:14:36.27:163,0,36	0/1:9,0:9:17.71:36,0,18	0/1:9,2:10:32.39:42,0,32	0/1:9,1:9:25.60:133,0,26	0/1:10,2:12:26.48:26,0,150	0/1:6,0:5:50.89:70,0,51	0/1:13,0:11:69.41:69,0,251	0/0:20,0:15:2.32:0,2,64	0/0:23,0:21:11.30:0,11,121	0/0:16,0:15:5.37:0,5,53	0/1:16,0:13:21.53:38,0,22	0/0:6,0:5:2.81:0,3,17	0/1:6,0:6:0:0,0,0	0/1:12,0:11:92.67:148,0,93	0/1:13,0:13:46.53:94,0,47	0/1:6,0:5:39:75,0,39
chr10	8052893	.	A	AT	4079.47	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=-8.719;DP=503;FS=5.521;HRun=7;HaplotypeScore=52.7782;InbreedingCoeff=0.9093;MQ=76.87;MQ0=0;MQRankSum=-1.629;QD=26.15;ReadPosRankSum=-1.953;VQSLOD=3.4952;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:99:0,99,950	0/0:10,0:10:30.05:0,30,289	0/1:13,0:13:3.66:4,0,190	0/0:16,0:15:36.03:0,36,337	1/1:7,20:27:74.97:838,75,0	0/0:14,0:14:39.06:0,39,377	0/0:18,0:18:51.07:0,51,486	1/1:5,26:31:78.21:918,78,0	0/0:19,0:19:45.05:0,45,429	0/0:26,0:26:78.11:0,78,744	0/0:22,0:22:63.05:0,63,599	0/0:7,0:7:12:0,12,111	0/0:14,0:14:36.06:0,36,347	0/0:23,0:23:45.06:0,45,435	1/1:2,14:16:36.11:432,36,0	1/1:2,13:15:36.11:432,36,0	0/0:20,0:20:54.08:0,54,517	0/0:19,0:19:54.05:0,54,513	0/0:20,0:20:57.04:0,57,533	0/0:19,0:19:51.02:0,51,477	0/0:9,0:9:24.04:0,24,232	0/0:7,0:7:21.03:0,21,200	0/0:17,0:17:47.29:0,47,442	0/0:12,0:12:24.03:0,24,232	0/0:22,0:22:51.06:0,51,492	1/1:2,18:20:28.19:623,28,0	1/1:2,23:24:63.19:761,63,0	1/1:7,2:9:6.02:72,6,0
chr10	8052974	.	CT	C	13209.04	PASS	AB=1.000;AC=53;AF=0.946;AN=56;BaseQRankSum=-1.165;DP=514;FS=5.394;HRun=6;HaplotypeScore=55.1585;InbreedingCoeff=0.6360;MQ=83.78;MQ0=0;MQRankSum=-6.480;QD=26.58;ReadPosRankSum=4.475;VQSLOD=5.2363;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,44:46:99:1384,129,0	1/1:3,6:9:18.04:193,18,0	0/1:16,0:16:40.90:41,0,194	0/0:17,0:17:27.05:0,27,321	1/1:1,22:23:66.03:678,66,0	1/1:0,21:21:60.15:644,60,0	1/1:2,16:18:42.11:451,42,0	1/1:8,14:22:63.07:626,63,0	1/1:1,15:16:39.10:419,39,0	1/1:2,23:25:65.90:688,66,0	1/1:2,19:21:54.13:579,54,0	1/1:1,15:16:39.10:419,39,0	1/1:1,10:11:30.07:322,30,0	1/1:3,13:16:33.08:354,33,0	1/1:4,6:10:21.04:217,21,0	1/1:3,9:12:33.05:338,33,0	1/1:3,20:23:51.13:548,51,0	1/1:1,17:18:48.12:515,48,0	1/1:1,18:19:54.03:532,54,0	1/1:3,21:24:63.11:664,63,0	1/1:1,10:11:27.07:290,27,0	1/1:1,12:13:27.06:290,27,0	1/1:2,14:16:42.10:451,42,0	1/1:0,11:11:30.08:322,30,0	1/1:2,18:20:54.13:580,54,0	1/1:3,26:29:78.19:836,78,0	1/1:7,18:25:60.13:634,60,0	1/1:0,6:6:18.05:193,18,0
chr10	8053790	.	TACACACACAC	T	1382.09	PASS	AB=0.881;AC=27;AF=0.614;AN=44;BaseQRankSum=3.496;DP=439;FS=2.568;HRun=0;HaplotypeScore=129.6898;InbreedingCoeff=0.2216;MQ=66.63;MQ0=20;MQRankSum=-2.482;QD=6.43;ReadPosRankSum=0.827;VQSLOD=2.5387;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:32:23.75:24,0,59	./.	./.	./.	0/1:16,1:18:25.24:106,0,25	0/0:12,0:18:2.60:0,3,10	0/0:14,0:18:6.08:0,6,64	0/0:21,0:21:6.49:0,6,82	1/1:9,0:13:3:30,3,0	1/1:8,4:9:7.19:142,7,0	./.	1/1:10,1:11:2.59:88,3,0	1/1:6,4:11:8.82:247,9,0	1/1:8,3:11:6.02:177,6,0	1/1:8,0:10:6.01:59,6,0	1/1:8,1:9:3.01:89,3,0	0/0:19,0:20:2.60:0,3,10	./.	0/0:11,0:11:8.02:0,8,69	0/1:7,1:9:3.38:83,0,3	0/0:23,0:23:27.09:0,27,605	1/1:7,1:7:3.01:88,3,0	1/1:4,6:10:3.01:88,3,0	1/1:10,6:16:6.02:158,6,0	0/1:11,0:14:23.71:24,0,32	0/1:18,0:17:3.10:3,0,32	1/1:8,3:12:5.11:116,5,0	./.
chr10	8055810	.	C	CA	20629.77	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-8.750;DP=583;FS=4.732;HRun=2;HaplotypeScore=53.8907;InbreedingCoeff=0.9932;MQ=59.32;MQ0=3;MQRankSum=6.097;QD=38.78;ReadPosRankSum=5.865;VQSLOD=4.8546;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,21:24:66.12:905,66,0	1/1:0,6:6:18.06:259,18,0	0/0:26,0:21:60.17:0,60,723	0/0:25,0:22:66.03:0,66,776	1/1:1,35:36:99:1512,105,0	1/1:0,28:28:78.26:1123,78,0	1/1:1,18:19:48.16:691,48,0	1/1:0,26:22:66.21:929,66,0	1/1:1,26:27:72.24:1037,72,0	1/1:1,21:22:60.19:846,60,0	1/1:1,24:25:66.22:950,66,0	1/1:1,10:11:30.10:432,30,0	1/1:1,25:26:69.23:994,69,0	1/1:1,11:13:36.12:517,36,0	1/1:0,17:17:51.17:734,51,0	1/1:0,17:17:48.16:691,48,0	1/1:1,26:27:78.19:1078,78,0	1/1:1,16:17:45.15:648,45,0	1/1:4,10:13:30.10:432,30,0	1/1:3,27:30:81.27:1167,81,0	1/1:1,19:20:54.18:778,54,0	1/1:1,23:24:63.21:907,63,0	1/1:0,25:25:60.07:841,60,0	1/1:1,6:7:21.06:284,21,0	1/1:1,16:17:45.15:648,45,0	1/1:0,19:19:57.17:801,57,0	1/1:2,15:16:48.06:668,48,0	1/1:0,18:18:54.15:756,54,0
chr10	8055971	.	C	CA	8352.26	PASS	AB=0.778;AC=37;AF=0.661;AN=56;BaseQRankSum=-10.005;DP=472;FS=0.773;HRun=8;HaplotypeScore=48.7080;InbreedingCoeff=0.7748;MQ=67.05;MQ0=0;MQRankSum=-0.264;QD=25.23;ReadPosRankSum=2.393;VQSLOD=5.4648;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,19:22:48.31:554,48,0	1/1:1,7:8:18.05:208,18,0	0/1:10,1:11:4.77:5,0,119	0/0:12,0:11:21:0,21,191	0/0:28,0:28:75.03:0,75,682	1/1:0,12:12:36.11:415,36,0	1/1:2,9:11:2.62:284,3,0	0/0:26,0:26:57:0,57,518	1/1:1,20:21:60.18:692,60,0	1/1:3,16:19:48.13:543,48,0	1/1:2,19:21:54.16:623,54,0	1/1:0,11:11:33.10:381,33,0	1/1:3,15:19:41.96:465,42,0	1/1:2,15:17:36.09:406,36,0	0/0:6,0:6:15:0,15,137	0/0:16,0:16:48.01:0,48,434	1/1:6,20:26:43.28:681,43,0	1/1:4,13:17:36.45:426,36,0	1/1:0,14:15:44.97:499,45,0	1/1:2,17:19:51.15:589,51,0	0/0:15,0:15:42.02:0,42,384	1/1:1,9:10:30.05:332,30,0	1/1:3,12:15:36.11:411,36,0	0/1:2,9:11:3.39:218,0,3	1/1:0,18:19:48.14:553,48,0	0/1:22,4:26:66.62:67,0,477	0/0:26,0:26:71.99:0,72,645	0/0:12,0:12:36.02:0,36,329
chr10	8061905	.	ACT	A	688.22	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.386;DP=661;FS=0.950;HRun=0;HaplotypeScore=74.1314;InbreedingCoeff=0.9996;MQ=90.55;MQ0=0;MQRankSum=-2.400;QD=43.01;ReadPosRankSum=0.855;VQSLOD=5.1213;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:93.32:0,93,1870	0/0:14,0:14:42.13:0,42,805	0/0:28,0:28:84.29:0,84,1706	0/0:26,0:26:78.27:0,78,1512	0/0:28,0:28:81.23:0,81,1603	0/0:25,0:25:75.24:0,75,1468	0/0:20,0:20:60.21:0,60,1199	0/0:28,0:28:84.28:0,84,1664	0/0:20,0:20:60.21:0,60,1204	0/0:36,0:36:99:0,108,2194	0/0:30,0:30:90.29:0,90,1789	0/0:20,0:20:60.18:0,60,1181	0/0:25,0:25:75.26:0,75,1524	0/0:28,0:28:84.29:0,84,1707	0/0:22,0:22:66.23:0,66,1341	0/0:12,0:12:36.12:0,36,732	0/0:12,0:12:36.12:0,36,713	0/0:12,0:12:36.12:0,36,731	0/0:17,0:17:51.18:0,51,1036	0/0:35,0:35:99:0,105,2087	1/1:0,16:16:48.16:783,48,0	0/0:19,0:19:57.20:0,57,1158	0/0:30,0:30:90.31:0,90,1829	0/0:19,0:19:54.15:0,54,1057	0/0:27,0:27:81.28:0,81,1646	0/0:23,0:23:69.24:0,69,1402	0/0:43,0:43:99:0,129,2580	0/0:15,0:15:45.10:0,45,836
chr10	8063754	.	T	TACACACACACACACAC	11528.96	PASS	AB=0.994;AC=29;AF=0.518;AN=56;BaseQRankSum=2.999;DP=588;FS=5.635;HRun=0;HaplotypeScore=308.6622;InbreedingCoeff=-0.1258;MQ=51.35;MQ0=8;MQRankSum=-5.117;QD=24.58;ReadPosRankSum=-1.971;VQSLOD=2.5294;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:7.28:0,7,257	0/1:12,0:12:52.94:791,0,53	0/0:19,0:8:11.20:0,11,243	0/1:30,0:20:17.02:17,0,410	1/1:19,0:19:11.44:97,11,0	0/1:33,0:32:49.26:49,0,127	0/0:10,0:10:14.51:0,15,127	1/1:22,0:21:39.28:785,39,0	0/1:22,0:22:99:956,0,152	0/1:26,0:25:99:718,0,492	0/1:19,0:19:28.85:29,0,160	0/1:25,0:25:99:962,0,203	0/1:24,0:24:92.73:1530,0,93	0/1:20,0:20:82.37:109,0,82	1/1:23,0:23:36.04:544,36,0	1/1:18,0:17:19.47:522,19,0	0/1:9,0:9:36.79:37,0,75	0/1:15,0:15:99:935,0,104	0/1:20,0:19:99:500,0,166	0/1:22,0:22:99:122,0,155	0/0:12,0:12:24:0,24,248	0/0:32,0:31:6.88:0,7,52	0/0:25,0:25:17.91:0,18,146	0/1:13,0:13:79.86:121,0,80	0/1:29,0:29:99:263,0,101	1/1:35,0:33:83.89:2072,84,0	1/1:17,0:17:15.91:122,16,0	1/1:1,7:12:5.99:249,6,0
chr10	8063758	.	T	TACACACACACACACACAC	13848.22	PASS	AB=1.000;AC=50;AF=0.926;AN=54;BaseQRankSum=-0.293;DP=602;FS=21.279;HRun=0;HaplotypeScore=315.3560;InbreedingCoeff=0.3394;MQ=48.64;MQ0=9;MQRankSum=0.194;QD=24.34;ReadPosRankSum=2.199;VQSLOD=2.3562;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:20:9.90:115,10,0	1/1:12,0:12:15.05:920,15,0	0/0:24,0:8:14.95:0,15,239	0/1:32,0:19:21.90:22,0,246	1/1:22,0:22:5.61:47,6,0	1/1:34,0:33:11:160,11,0	1/1:10,0:10:8.98:71,9,0	1/1:23,0:23:40.55:802,41,0	1/1:21,0:21:20.38:1056,20,0	1/1:22,0:25:33.94:997,34,0	1/1:18,0:18:6.02:110,6,0	1/1:25,0:25:23.80:1171,24,0	1/1:24,0:24:35.17:1876,35,0	1/1:20,0:20:11.69:229,12,0	1/1:22,0:22:27.55:804,28,0	1/1:18,0:17:12.01:350,12,0	1/1:10,0:10:5.23:98,5,0	1/1:15,0:15:23.84:1038,24,0	1/1:20,0:19:34.89:826,35,0	1/1:12,0:22:11.68:235,12,0	./.	1/1:34,0:33:2.50:9,2,0	1/1:23,0:23:17.66:158,18,0	0/1:14,0:14:0.51:64,0,1	1/1:27,0:27:11.96:379,12,0	1/1:36,0:34:62.59:2065,63,0	1/1:7,8:28:0.94:2,1,0	1/1:12,0:11:6.02:245,6,0
chr10	8063760	.	C	CAT	3148.03	PASS	AB=1.000;AC=34;AF=0.630;AN=54;BaseQRankSum=-6.133;DP=613;FS=15.688;HRun=0;HaplotypeScore=156.5291;InbreedingCoeff=0.7365;MQ=46.78;MQ0=10;MQRankSum=3.487;QD=8.72;ReadPosRankSum=3.060;VQSLOD=2.5393;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:21:2.21:176,2,0	1/1:12,0:12:8.99:91,9,0	0/0:26,0:9:24.07:0,24,310	0/0:32,0:17:39.67:0,40,350	0/0:21,0:21:18.88:0,19,144	1/1:32,1:32:17.18:197,17,0	1/1:11,0:11:15.02:192,15,0	0/0:24,0:23:8.57:0,9,289	0/1:23,0:23:1:215,0,1	1/1:26,0:25:21.04:431,21,0	1/1:18,0:18:21.47:210,21,0	1/1:25,0:25:32.78:278,33,0	1/1:24,0:24:15.74:119,16,0	1/1:22,0:22:11.89:142,12,0	0/0:22,0:22:13.33:0,13,153	0/0:18,0:17:12.82:0,13,93	1/1:11,0:11:8.53:49,9,0	1/1:15,0:15:23.71:175,24,0	0/1:21,0:20:50.66:139,0,51	1/1:23,0:23:5.18:165,5,0	1/1:10,0:10:23.84:188,24,0	./.	1/1:24,0:24:20.32:251,20,0	1/1:15,0:15:14.97:166,15,0	1/1:27,0:27:14.87:159,15,0	0/0:35,0:33:72.95:0,73,587	0/0:28,0:28:20.74:0,21,166	0/0:12,0:11:1.03:0,1,40
chr10	8065662	.	T	TTCTC	1071.60	PASS	AB=1.000;AC=41;AF=0.820;AN=50;BaseQRankSum=-0.732;DP=533;FS=0.000;HRun=0;HaplotypeScore=125.6175;InbreedingCoeff=0.1525;MQ=71.15;MQ0=7;MQRankSum=-0.983;QD=2.46;ReadPosRankSum=-2.112;VQSLOD=2.0403;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:32,0:32:3.01:42,3,0	1/1:9,0:9:5.57:66,6,0	./.	0/1:37,0:18:0:1,0,0	0/1:20,0:20:0:0,0,0	0/1:10,0:10:0:0,0,0	1/1:11,0:14:2.74:12,3,0	./.	1/1:12,0:12:3.01:39,3,0	1/1:23,0:25:17.62:96,18,0	0/1:21,0:20:6.07:18,0,6	1/1:8,1:9:7.84:112,8,0	1/1:16,0:16:6.02:105,6,0	1/1:13,0:13:3.48:40,3,0	1/1:13,0:15:2.74:13,3,0	1/1:9,0:10:5.69:30,6,0	1/1:16,0:16:6.03:165,6,0	1/1:14,0:14:13.40:193,13,0	1/1:16,0:16:0.47:1,0,0	0/1:23,0:23:0.07:0,0,0	0/1:15,0:15:0:0,0,0	1/1:20,0:20:3.01:39,3,0	1/1:18,0:18:3.01:39,3,0	0/0:15,6:22:0.47:0,0,1	1/1:25,0:25:6:51,6,0	1/1:18,0:18:3.90:55,4,0	0/1:27,0:27:42.62:43,0,83	./.
chr10	8065745	.	G	GT	4660.99	PASS	AB=0.906;AC=54;AF=0.964;AN=56;BaseQRankSum=-3.204;DP=260;FS=17.098;HRun=0;HaplotypeScore=121.0752;InbreedingCoeff=0.0253;MQ=65.44;MQ0=0;MQRankSum=-4.076;QD=17.93;ReadPosRankSum=3.262;VQSLOD=5.9923;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,16:16:41.76:339,42,0	1/1:1,7:8:23.88:191,24,0	0/1:10,1:10:59.50:107,0,60	0/1:14,2:13:42.82:164,0,43	1/1:0,10:10:0.94:4,1,0	1/1:0,15:14:41.94:344,42,0	1/1:0,15:15:38.94:318,39,0	1/1:1,16:17:51.02:460,51,0	1/1:0,8:8:20.98:173,21,0	1/1:0,11:11:33.02:299,33,0	1/1:1,10:11:14.93:116,15,0	1/1:0,5:5:11.99:99,12,0	1/1:0,5:5:11.98:98,12,0	1/1:0,4:4:8.99:76,9,0	1/1:0,4:4:11.99:99,12,0	1/1:0,1:1:3:25,3,0	1/1:0,12:12:28.90:229,29,0	1/1:1,4:5:7.69:79,8,0	1/1:1,5:6:15.02:141,15,0	1/1:0,9:9:14.98:125,15,0	1/1:2,9:11:14.98:124,15,0	1/1:0,5:5:14.98:125,15,0	1/1:0,12:12:20.95:169,21,0	1/1:0,15:15:11.96:97,12,0	1/1:0,8:8:20.98:173,21,0	1/1:0,8:8:24.01:214,24,0	1/1:0,8:8:23.83:194,24,0	1/1:0,3:3:9:77,9,0
chr10	8065748	.	C	CT	5224.60	PASS	AB=0.806;AC=54;AF=0.964;AN=56;BaseQRankSum=-2.183;DP=255;FS=27.863;HRun=1;HaplotypeScore=116.1657;InbreedingCoeff=-0.0532;MQ=61.59;MQ0=0;MQRankSum=-4.289;QD=20.49;ReadPosRankSum=1.816;VQSLOD=3.4653;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:16:39.48:347,39,0	1/1:8,0:8:23.75:199,24,0	0/1:5,2:7:18.08:140,0,18	0/1:12,3:11:35.98:151,0,36	1/1:10,0:10:15.31:100,15,0	1/1:15,0:14:41.99:367,42,0	1/1:15,0:15:38.94:328,39,0	1/1:17,0:17:51.06:475,51,0	1/1:8,0:8:23.94:200,24,0	1/1:11,0:11:33.04:308,33,0	1/1:11,0:11:20.83:154,21,0	1/1:5,0:5:12:106,12,0	1/1:5,0:5:12.01:107,12,0	1/1:4,0:4:11.94:93,12,0	1/1:4,0:4:12.01:107,12,0	1/1:1,0:1:3:27,3,0	1/1:12,0:12:27.76:222,28,0	1/1:5,0:5:11.98:104,12,0	1/1:7,0:7:20.87:179,21,0	1/1:9,0:9:17.97:151,18,0	1/1:11,0:11:17.97:152,18,0	1/1:5,0:5:14.99:129,15,0	1/1:12,0:12:29.88:237,30,0	1/1:15,0:15:17.86:141,18,0	1/1:8,0:8:21.01:187,21,0	1/1:8,0:8:24.02:218,24,0	1/1:8,0:8:24:213,24,0	1/1:3,0:3:9.01:83,9,0
chr10	8066893	.	CT	C	5266.54	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=11.120;DP=476;FS=1.250;HRun=2;HaplotypeScore=45.6235;InbreedingCoeff=0.9977;MQ=87.59;MQ0=0;MQRankSum=-3.107;QD=40.20;ReadPosRankSum=2.922;VQSLOD=5.0011;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:63.21:0,63,991	0/0:6,0:6:18.06:0,18,288	0/0:20,0:20:60.17:0,60,918	0/0:13,0:13:36.43:0,36,487	1/1:0,22:22:66.22:909,66,0	0/0:18,0:18:54.18:0,54,859	0/0:12,0:12:36.10:0,36,551	1/1:0,22:22:66.22:920,66,0	0/0:23,0:23:66.23:0,66,1053	0/0:21,0:21:63.21:0,63,1007	0/0:17,0:17:51.16:0,51,787	0/0:15,0:15:45.15:0,45,717	0/0:14,0:14:42.13:0,42,643	0/0:16,0:16:48.16:0,48,762	1/1:0,14:14:42.14:587,42,0	1/1:0,20:20:57.19:796,57,0	0/0:24,0:24:69.21:0,69,1077	0/0:7,0:7:21.07:0,21,332	0/0:17,0:17:51.17:0,51,811	0/0:24,0:24:69.22:0,69,1080	0/0:15,0:15:45.15:0,45,719	0/0:13,0:13:39.13:0,39,619	0/0:16,0:16:48.15:0,48,740	0/0:16,0:16:48.16:0,48,763	0/0:16,0:16:48.16:0,48,767	1/1:0,14:14:42.14:587,42,0	1/1:0,22:22:54.18:754,54,0	1/1:0,17:17:51.17:713,51,0
chr10	8067163	.	A	ATTGT	29583.77	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-2.229;DP=660;FS=0.776;HRun=0;HaplotypeScore=101.3355;InbreedingCoeff=0.9870;MQ=77.78;MQ0=3;MQRankSum=-8.093;QD=48.50;ReadPosRankSum=5.179;VQSLOD=5.0956;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,20:27:45.15:1108,45,0	1/1:0,5:5:15.05:373,15,0	0/0:27,0:27:21.95:0,22,696	0/0:22,0:22:25.68:0,26,418	1/1:5,24:31:66.12:1501,66,0	1/1:6,16:23:33.11:822,33,0	1/1:8,14:22:39.09:907,39,0	1/1:17,20:41:78.22:1709,78,0	1/1:7,23:31:60.21:1488,60,0	1/1:5,18:23:57.20:1417,57,0	1/1:4,20:24:60.16:1430,60,0	1/1:7,13:20:45.15:1096,45,0	1/1:4,18:21:48.16:1183,48,0	1/1:4,14:18:42.14:1024,42,0	1/1:3,17:21:33.11:818,33,0	1/1:5,18:23:48.16:1191,48,0	1/1:5,15:21:42.62:1047,43,0	1/1:7,10:17:27.09:671,27,0	1/1:13,13:25:45.13:998,45,0	1/1:11,32:44:96.26:2242,96,0	1/1:9,17:30:39.13:964,39,0	1/1:5,16:23:51.18:1269,51,0	1/1:5,23:29:60.21:1460,60,0	1/1:6,23:29:63.22:1568,63,0	1/1:3,9:12:24.08:592,24,0	1/1:9,12:21:45.14:1065,45,0	1/1:1,13:13:39.13:970,39,0	1/1:2,9:11:27.09:669,27,0
chr10	8070550	.	G	GTTA	8248.25	PASS	AB=0.552;AC=13;AF=0.232;AN=56;BaseQRankSum=-10.233;DP=508;FS=0.000;HRun=0;HaplotypeScore=93.7621;InbreedingCoeff=0.8960;MQ=88.32;MQ0=1;MQRankSum=-9.608;QD=56.88;ReadPosRankSum=-0.762;VQSLOD=6.6220;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:57.16:0,57,941	0/0:12,0:12:33.10:0,33,537	0/0:16,0:16:48.14:0,48,779	0/0:23,0:23:66.21:0,66,1086	1/1:4,28:32:84.29:1885,84,0	0/0:22,0:22:62.80:0,63,1021	0/0:14,0:14:42.14:0,42,710	1/1:7,11:20:54.15:1152,54,0	0/0:18,0:18:51.17:0,51,870	0/0:20,0:20:54.18:0,54,921	0/0:23,0:23:69.24:0,69,1167	0/0:18,0:18:54.18:0,54,913	0/0:17,0:17:48.14:0,48,790	0/0:22,0:22:66.23:0,66,1126	1/1:1,18:18:45.15:975,45,0	1/1:0,15:15:42.14:968,42,0	0/0:12,0:12:33.11:0,33,563	0/0:6,0:6:15.02:0,15,227	0/0:9,0:9:21.07:0,21,358	0/0:26,0:26:75.26:0,75,1260	0/0:18,0:18:54.18:0,54,914	0/0:13,0:13:39.13:0,39,665	0/0:20,0:20:57.19:0,57,969	0/0:10,0:10:30.10:0,30,512	0/0:25,0:25:72.23:0,72,1188	0/1:3,13:16:54.20:895,0,54	1/1:6,21:28:69.24:1544,69,0	1/1:1,14:15:36.12:829,36,0
chr10	8071125	.	GTGTGTGTT	G	3891.67	PASS	AB=1.000;AC=46;AF=0.852;AN=54;BaseQRankSum=-5.837;DP=512;FS=19.220;HRun=0;HaplotypeScore=159.6357;InbreedingCoeff=-0.1464;MQ=53.60;MQ0=15;MQRankSum=2.775;QD=7.77;ReadPosRankSum=-1.353;VQSLOD=1.1067;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:16:0.27:164,0,0	0/1:12,0:12:9.01:21,0,9	0/1:30,0:11:36.41:36,0,48	0/1:18,0:7:11.47:37,0,11	1/1:22,0:22:2.14:43,2,0	1/1:13,0:13:5.14:47,5,0	0/1:15,0:15:1.43:13,0,1	1/1:16,0:16:28.82:220,29,0	1/1:21,0:20:0.06:53,0,0	1/1:30,0:28:58.26:588,58,0	1/1:18,2:20:35.24:282,35,0	1/1:12,0:11:17.26:140,17,0	1/1:19,0:19:17.92:208,18,0	1/1:13,1:14:23.63:247,24,0	0/1:13,0:13:5.90:10,0,6	1/1:14,0:14:8.96:181,9,0	1/1:13,0:13:2.57:100,3,0	0/1:17,0:16:48.82:138,0,49	0/1:16,0:16:3.38:140,0,3	1/1:36,0:36:38.63:328,39,0	1/1:13,0:13:6.41:141,6,0	1/1:18,1:19:20.51:130,21,0	1/1:22,0:22:29.08:216,29,0	./.	1/1:27,0:27:12.26:112,12,0	0/1:28,0:25:4.16:272,0,4	1/1:21,0:21:5.78:23,6,0	1/1:3,0:3:1.25:3,1,0
chr10	8071127	.	GTGTGTT	G	6251.68	PASS	AB=0.986;AC=50;AF=0.926;AN=54;BaseQRankSum=-1.271;DP=517;FS=1.017;HRun=0;HaplotypeScore=142.0729;InbreedingCoeff=-0.0761;MQ=53.66;MQ0=16;MQRankSum=1.713;QD=12.33;ReadPosRankSum=3.981;VQSLOD=3.9414;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:18:23.29:190,23,0	1/1:12,0:12:23.53:153,24,0	0/1:29,0:10:36.63:37,0,48	0/1:19,0:7:11.47:37,0,11	1/1:22,0:22:10.29:89,10,0	1/1:16,0:16:17.74:116,18,0	0/1:16,0:16:1.39:13,0,1	1/1:17,0:17:47.49:341,47,0	1/1:21,0:20:20.53:124,21,0	1/1:2,26:26:65.46:958,65,0	1/1:5,15:20:35.24:285,35,0	1/1:11,1:11:17.36:173,17,0	1/1:1,18:19:18.17:424,18,0	1/1:2,12:14:23.65:324,24,0	1/1:14,0:14:8.37:52,8,0	1/1:13,1:14:35.75:315,36,0	1/1:13,0:13:8.53:126,9,0	0/1:16,1:16:25.74:138,0,26	1/1:15,0:15:24.69:252,25,0	1/1:34,2:36:70.85:561,71,0	1/1:13,0:13:6.41:141,6,0	1/1:1,17:18:20.51:168,21,0	1/1:5,17:22:29.09:323,29,0	./.	1/1:26,1:27:26.63:218,27,0	1/1:28,0:25:61.06:483,61,0	1/1:22,0:22:23.42:184,23,0	1/1:4,0:3:3:26,3,0
chr10	8071129	.	GTGTT	G	6848.16	PASS	AB=0.883;AC=50;AF=0.926;AN=54;BaseQRankSum=-1.609;DP=516;FS=2.162;HRun=0;HaplotypeScore=129.6938;InbreedingCoeff=-0.0724;MQ=53.46;MQ0=18;MQRankSum=0.867;QD=13.56;ReadPosRankSum=4.469;VQSLOD=4.4343;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:19:26.27:185,26,0	1/1:0,12:12:23.91:371,24,0	0/1:31,0:10:36.89:37,0,47	0/1:20,0:7:11.94:37,0,12	1/1:0,21:21:9.56:158,10,0	1/1:1,15:16:17.84:221,18,0	0/1:2,14:16:1.01:13,0,1	1/1:17,0:17:47.52:342,48,0	1/1:1,19:19:20.76:238,21,0	1/1:28,0:26:65.39:650,65,0	1/1:18,0:18:35.24:240,35,0	1/1:12,1:12:20.34:166,20,0	1/1:19,0:19:18.13:232,18,0	1/1:14,0:14:23.39:216,23,0	1/1:2,12:14:8.57:129,9,0	1/1:11,2:13:35.76:313,36,0	1/1:12,1:13:13.23:163,13,0	0/1:16,0:15:9.65:138,0,10	1/1:2,13:15:24.29:388,24,0	1/1:3,32:35:71.10:747,71,0	1/1:13,0:13:6.59:141,7,0	1/1:18,0:18:20.51:136,21,0	1/1:21,0:21:29.30:227,29,0	./.	1/1:2,25:27:26.75:294,27,0	1/1:3,25:25:58.29:600,58,0	1/1:0,23:23:23.70:410,24,0	1/1:1,3:3:3.01:57,3,0
chr10	8071131	.	GTT	G	5119.78	PASS	AB=1.000;AC=51;AF=0.944;AN=54;BaseQRankSum=-0.972;DP=508;FS=1.136;HRun=3;HaplotypeScore=125.0404;InbreedingCoeff=-0.0497;MQ=52.01;MQ0=19;MQRankSum=2.163;QD=10.30;ReadPosRankSum=4.824;VQSLOD=1.8272;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:17:26.04:157,26,0	1/1:12,0:12:23.81:180,24,0	0/1:33,0:9:36.89:37,0,47	0/1:19,0:6:11.93:37,0,12	1/1:21,0:21:14.63:102,15,0	1/1:15,0:15:17.79:126,18,0	0/1:16,0:16:1.01:13,0,1	1/1:1,16:17:47.56:344,48,0	1/1:20,0:19:20.72:144,21,0	1/1:28,0:26:65.16:525,65,0	1/1:18,0:18:35.18:212,35,0	1/1:11,0:10:20.46:158,20,0	1/1:19,0:19:17.99:149,18,0	1/1:14,0:14:23.50:159,24,0	1/1:13,0:13:8.44:66,8,0	1/1:14,0:14:38.72:291,39,0	1/1:12,0:12:17.66:139,18,0	1/1:16,0:15:7.89:149,8,0	1/1:14,0:14:22.81:271,23,0	1/1:35,0:35:70.93:498,71,0	1/1:13,0:13:6.55:141,7,0	1/1:18,0:18:20.49:122,20,0	1/1:18,1:19:29.23:186,29,0	./.	1/1:26,0:26:26.67:185,27,0	1/1:29,0:25:64.70:517,65,0	1/1:23,0:23:23.57:188,24,0	1/1:4,0:3:3:25,3,0
chr10	8072811	.	T	TAGAC	8563.98	PASS	AC=34;AF=0.630;AN=54;BaseQRankSum=0.780;DP=663;FS=2.494;HRun=0;HaplotypeScore=158.8452;InbreedingCoeff=0.9387;MQ=60.88;MQ0=5;MQRankSum=1.365;QD=20.54;ReadPosRankSum=2.142;VQSLOD=4.9573;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:26:29.58:373,30,0	1/1:15,0:15:38.60:345,39,0	0/0:20,0:17:19.36:0,19,249	0/0:20,0:19:29.08:0,29,314	0/0:28,0:28:65.88:0,66,737	1/1:17,0:17:32.58:285,33,0	1/1:21,0:19:29.94:247,30,0	0/0:42,0:41:82.47:0,82,820	1/1:22,0:22:4:211,4,0	1/1:41,0:41:99:1357,110,0	1/1:18,1:19:38.76:454,39,0	1/1:33,0:32:55.10:519,55,0	1/1:30,0:29:65.88:576,66,0	./.	0/0:21,0:21:60:0,60,618	0/0:20,0:19:57.02:0,57,631	1/1:19,0:19:50.23:450,50,0	1/1:4,0:4:11.95:134,12,0	1/1:26,0:26:71.54:640,72,0	1/1:35,0:34:76.89:595,77,0	0/0:22,0:22:38.99:0,39,376	1/1:19,0:19:41.72:415,42,0	1/1:35,0:34:64.96:701,65,0	1/1:20,0:20:38.69:296,39,0	1/1:35,0:35:78.20:966,78,0	0/0:19,0:19:11.69:0,12,322	0/0:30,0:30:31.80:0,32,439	0/0:2,0:1:0:0,0,0
chr10	8072815	.	CAGAT	C	807.42	PASS	AB=1.000;AC=18;AF=0.360;AN=50;BaseQRankSum=-1.387;DP=667;FS=10.845;HRun=0;HaplotypeScore=191.2995;InbreedingCoeff=0.0992;MQ=59.86;MQ0=7;MQRankSum=0.867;QD=2.74;ReadPosRankSum=-1.204;VQSLOD=1.2215;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:11.79:0,12,145	0/0:14,0:14:18.51:0,19,265	./.	./.	0/1:28,0:28:27.71:28,0,87	0/1:17,0:17:14.11:14,0,58	0/0:21,0:19:2.37:0,2,8	0/0:42,0:40:0:0,0,0	0/1:22,0:22:14.62:15,0,80	0/0:42,0:42:65.46:0,65,615	0/1:19,0:19:20.38:20,0,64	0/1:28,0:27:0.33:0,0,181	0/0:30,0:29:14.98:0,15,149	./.	0/1:23,0:23:27.95:59,0,28	0/1:22,0:21:13.29:13,0,105	0/0:23,0:23:6.33:0,6,115	0/1:5,0:5:12.97:13,0,39	0/0:26,0:25:13.39:0,13,177	0/0:38,0:37:25.06:0,25,272	1/1:9,10:19:12.04:183,12,0	0/1:20,0:20:16.11:16,0,44	0/1:36,0:35:40.23:40,0,84	0/0:21,0:21:26.63:0,27,321	0/0:34,0:34:42.24:0,42,580	1/1:19,2:21:26.41:179,26,0	1/1:28,4:31:32.69:319,33,0	1/1:3,0:2:6.02:67,6,0
chr10	8072875	.	CAGAT	C	18369.36	PASS	AB=1.000;AC=42;AF=0.750;AN=56;BaseQRankSum=-6.097;DP=729;FS=1.311;HRun=0;HaplotypeScore=176.3577;InbreedingCoeff=0.5987;MQ=55.98;MQ0=6;MQRankSum=1.300;QD=30.72;ReadPosRankSum=4.307;VQSLOD=5.0484;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:72.08:0,72,1272	1/1:14,0:14:7.81:430,8,0	0/0:14,0:11:33.10:0,33,528	0/0:15,0:12:32.61:0,33,408	0/0:9,29:38:14.13:0,14,76	1/1:16,0:16:11.80:371,12,0	1/1:20,0:18:11.26:271,11,0	1/1:5,24:27:72.07:894,72,0	1/1:1,24:25:6.02:113,6,0	1/1:50,0:50:99:1926,139,0	1/1:25,0:25:52.75:719,53,0	0/1:24,0:23:99:433,0,109	0/1:25,0:25:14.25:741,0,14	1/1:18,0:18:45.11:682,45,0	1/1:29,0:29:25.20:857,25,0	0/1:22,0:22:4.20:688,0,4	1/1:19,0:19:46.68:737,47,0	1/1:5,0:5:13.33:102,13,0	1/1:24,0:24:58.50:851,59,0	1/1:41,0:41:99:1564,101,0	0/0:31,0:31:47.01:0,47,953	1/1:31,0:31:69.62:994,70,0	1/1:31,0:31:54.06:726,54,0	0/1:28,0:28:99:633,0,178	1/1:43,0:43:92.80:1447,93,0	1/1:0,33:33:96.25:1395,96,0	1/1:20,4:23:65.95:867,66,0	1/1:22,0:21:63.17:928,63,0
chr10	8073193	.	GT	G	10705.24	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=0.252;DP=667;FS=30.494;HRun=10;HaplotypeScore=97.2870;InbreedingCoeff=0.9938;MQ=74.07;MQ0=0;MQRankSum=-6.745;QD=16.73;ReadPosRankSum=5.456;VQSLOD=3.5870;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,41:49:99:1042,120,0	1/1:1,10:11:29.99:260,30,0	0/0:10,0:10:20.09:0,20,191	0/0:17,0:17:27.05:0,27,282	1/1:4,0:27:36.64:108,37,0	1/1:1,24:25:71.98:624,72,0	1/1:1,11:12:29.99:260,30,0	1/1:8,0:35:45.27:141,45,0	1/1:3,24:27:69.45:599,69,0	1/1:6,30:36:59.72:741,60,0	1/1:1,20:21:26.80:462,27,0	1/1:1,17:18:47.89:407,48,0	1/1:1,13:14:35.99:312,36,0	1/1:1,16:17:47.99:416,48,0	1/1:2,0:23:30.55:90,31,0	1/1:1,0:26:40.74:120,41,0	1/1:2,29:31:84.93:731,85,0	1/1:0,9:9:26.99:234,27,0	1/1:2,16:18:47.99:416,48,0	1/1:5,30:35:89.97:777,90,0	1/1:4,16:20:38.99:338,39,0	1/1:2,27:29:80.97:703,81,0	1/1:3,21:24:59.98:521,60,0	1/1:6,21:27:26.76:462,27,0	1/1:6,18:24:57.83:490,58,0	1/1:0,1:30:60.04:193,60,0	1/1:0,0:31:59.08:174,59,0	1/1:3,0:21:28.51:84,29,0
chr10	8074106	.	G	GA	7814.97	PASS	AB=0.526;AC=13;AF=0.232;AN=56;BaseQRankSum=-15.187;DP=646;FS=5.395;HRun=4;HaplotypeScore=60.3182;InbreedingCoeff=0.8992;MQ=83.31;MQ0=0;MQRankSum=-1.147;QD=40.49;ReadPosRankSum=-0.312;VQSLOD=3.4806;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:96.31:0,96,1245	0/0:10,0:10:30.10:0,30,388	0/0:21,0:21:63.20:0,63,801	0/0:19,0:19:22.83:0,23,551	1/1:1,33:35:93.27:1350,93,0	0/0:32,0:32:93.29:0,93,1192	0/0:17,0:17:45.15:0,45,584	1/1:1,25:26:75.25:1124,75,0	0/0:19,0:19:51.17:0,51,661	0/0:29,0:29:84.27:0,84,1090	0/0:21,0:21:60.16:0,60,749	0/0:25,0:25:69.22:0,69,896	0/0:21,0:21:60.20:0,60,779	0/0:20,0:20:60.19:0,60,776	1/1:0,29:29:75.25:1124,75,0	1/1:0,24:24:69.23:1034,69,0	0/0:17,0:17:51.17:0,51,662	0/0:13,0:13:39.13:0,39,503	0/0:17,0:17:48.14:0,48,609	0/0:30,0:30:90.29:0,90,1169	0/0:14,0:14:36.12:0,36,467	0/0:27,0:27:81.26:0,81,1047	0/0:21,0:21:63.20:0,63,818	0/0:25,0:25:75.24:0,75,972	0/0:22,0:22:63.19:0,63,803	0/1:4,36:40:35.49:1474,0,35	1/1:0,26:26:78.26:1169,78,0	1/1:1,12:13:36.12:539,36,0
chr10	8075233	.	C	CT	4362.88	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-9.617;DP=569;FS=0.373;HRun=9;HaplotypeScore=62.1737;InbreedingCoeff=0.9702;MQ=72.22;MQ0=0;MQRankSum=1.098;QD=25.51;ReadPosRankSum=-2.563;VQSLOD=4.5226;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:62.94:0,63,541	0/0:10,0:10:26.99:0,27,234	0/0:12,0:10:11.32:0,11,87	0/0:18,0:18:6.31:0,6,161	1/1:2,34:36:93.21:1011,93,0	0/0:27,0:27:65.97:0,66,572	0/0:18,0:18:41.96:0,42,364	1/1:5,19:24:56.74:573,57,0	0/0:11,0:11:32.96:0,33,279	0/0:26,0:27:64.96:0,65,541	0/0:27,0:27:68.95:0,69,599	0/0:21,0:21:47.93:0,48,408	0/0:14,0:14:41.99:0,42,364	0/0:13,0:13:32.99:0,33,286	1/1:1,19:19:45.12:497,45,0	1/1:2,22:24:47.94:531,48,0	0/0:29,0:29:74.93:0,75,642	0/0:15,0:14:38.96:0,39,333	0/0:23,0:23:56.95:0,57,488	0/0:25,0:25:59.97:0,60,521	0/0:3,0:11:14.26:0,14,42	0/0:17,0:17:44.98:0,45,390	0/0:28,0:28:71.95:0,72,619	0/0:10,0:10:23.99:0,24,208	0/0:18,0:18:41.98:0,42,365	1/1:3,23:26:49.03:724,49,0	1/1:4,28:32:75.20:829,75,0	1/1:3,6:9:18.05:199,18,0
chr10	8075334	.	G	GGTGTGTGT	14368.74	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-1.030;DP=626;FS=0.000;HRun=0;HaplotypeScore=165.2353;InbreedingCoeff=0.4988;MQ=58.36;MQ0=19;MQRankSum=0.038;QD=26.71;ReadPosRankSum=2.987;VQSLOD=4.3799;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:26:9.01:122,9,0	1/1:5,1:9:15.05:534,15,0	0/0:41,0:26:4.26:0,4,103	0/0:47,0:20:2.30:0,2,32	1/1:24,0:23:22.45:393,22,0	1/1:18,7:26:17.15:678,17,0	1/1:20,9:31:30.09:894,30,0	1/1:26,0:25:29.74:538,30,0	1/1:11,3:13:6.02:245,6,0	1/1:16,0:25:34.63:595,35,0	1/1:9,8:19:18.06:622,18,0	1/1:11,4:17:15.05:557,15,0	1/1:16,0:17:19.31:716,19,0	1/1:11,5:17:12.04:471,12,0	1/1:17,0:17:6.02:179,6,0	1/1:20,0:20:9.03:310,9,0	1/1:16,4:22:21.07:802,21,0	1/1:13,4:15:8.77:307,9,0	1/1:24,0:23:12.04:253,12,0	1/1:7,13:22:15.05:558,15,0	1/1:15,0:11:8.36:174,8,0	1/1:5,4:11:21.07:795,21,0	1/1:14,11:26:27.09:1002,27,0	1/1:19,0:19:8.72:294,9,0	1/1:8,13:26:51.16:1753,51,0	1/1:29,0:26:42.14:1156,42,0	1/1:20,0:20:9.03:311,9,0	1/1:10,0:10:4.57:108,5,0
chr10	8075364	.	T	TGTGTGTGG	9818.88	PASS	AB=0.967;AC=31;AF=0.554;AN=56;BaseQRankSum=6.926;DP=539;FS=0.000;HRun=0;HaplotypeScore=142.3653;InbreedingCoeff=-0.3857;MQ=59.82;MQ0=16;MQRankSum=-9.355;QD=22.02;ReadPosRankSum=4.338;VQSLOD=4.2515;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:31,0:27:45.04:45,0,160	0/1:7,1:8:53.77:357,0,54	0/0:35,0:20:46.97:0,47,537	0/0:35,0:18:37.52:0,38,425	1/1:20,0:20:39.34:640,39,0	0/1:20,0:20:99:442,0,111	0/1:20,0:20:99:533,0,101	1/1:24,0:24:68.55:716,69,0	0/1:7,0:7:87.36:87,0,104	0/1:19,0:17:99:357,0,157	0/1:10,1:11:37.79:426,0,38	0/1:12,0:12:96.66:350,0,97	0/1:10,2:16:30.95:354,0,31	0/1:12,1:13:95.73:194,0,96	1/1:20,0:20:8.63:134,9,0	1/1:19,0:19:9.03:301,9,0	0/1:16,0:16:83.65:240,0,84	0/1:14,0:12:99:156,0,160	0/1:15,0:15:99:212,0,201	0/1:23,0:23:99:419,0,280	0/1:18,0:14:87.73:122,0,88	0/1:15,0:15:99:463,0,131	0/1:18,1:19:99:857,0,104	0/0:14,0:23:15.83:0,16,120	0/1:25,0:24:79.67:1439,0,80	1/1:23,0:20:25.98:553,26,0	1/1:21,0:21:12:318,12,0	0/1:12,0:12:8.67:108,0,9
chr10	8075365	.	G	GTGTGTGTGTGTGT	7563.40	PASS	AB=0.932;AC=32;AF=0.571;AN=56;BaseQRankSum=11.394;DP=538;FS=2.404;HRun=0;HaplotypeScore=190.0379;InbreedingCoeff=-0.4639;MQ=61.38;MQ0=15;MQRankSum=-8.477;QD=16.02;ReadPosRankSum=4.090;VQSLOD=3.8292;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:21,0:26:22.92:23,0,321	0/1:8,0:8:98.90:198,0,99	0/0:34,0:20:51.16:0,51,673	0/0:30,0:18:40.99:0,41,497	1/1:10,0:21:36.26:932,36,0	0/1:19,0:19:99:195,0,242	0/1:19,0:20:99:262,0,198	1/1:18,0:25:61.83:768,62,0	0/1:9,0:8:35.58:36,0,182	0/1:18,0:17:99:143,0,278	0/1:11,0:11:96.20:181,0,96	0/1:13,0:13:99:179,0,173	0/1:10,0:12:60.21:217,0,60	0/1:13,0:13:83.34:83,0,200	1/1:2,1:23:8.04:222,8,0	1/1:0,0:18:9.03:521,9,0	0/1:17,0:17:89.19:89,0,229	0/1:12,0:12:99:169,0,324	0/1:17,0:17:99:172,0,316	0/1:23,0:23:99:172,0,503	0/1:11,0:14:99:235,0,176	0/1:16,0:16:99:232,0,261	0/1:20,0:19:99:506,0,195	0/1:17,0:17:63.32:63,0,250	0/1:24,0:24:99:691,0,197	0/1:5,0:21:2.26:542,0,2	1/1:1,0:24:9.03:515,9,0	1/1:4,0:14:8.72:215,9,0
chr10	8075666	.	CG	C	11416.59	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=16.944;DP=560;FS=9.464;HRun=2;HaplotypeScore=81.6987;InbreedingCoeff=0.9980;MQ=92.69;MQ0=0;MQRankSum=-2.783;QD=36.24;ReadPosRankSum=3.511;VQSLOD=5.1118;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:63.20:0,63,923	1/1:0,13:13:36.12:466,36,0	0/0:19,0:19:54.11:0,54,718	0/0:29,0:29:75.25:0,75,1098	0/0:17,0:17:51.13:0,51,703	1/1:0,33:33:96.31:1246,96,0	1/1:0,10:10:30.10:389,30,0	0/0:30,0:30:87.28:0,87,1264	1/1:0,22:22:60.20:779,60,0	1/1:0,19:19:57.18:727,57,0	1/1:0,16:16:48.16:622,48,0	1/1:0,26:26:75.24:974,75,0	1/1:0,24:24:66.21:853,66,0	1/1:0,30:30:84.27:1089,84,0	0/0:24,0:24:69.23:0,69,1034	0/0:23,0:23:66.21:0,66,970	1/1:1,10:11:27.09:350,27,0	1/1:0,6:6:18.06:232,18,0	1/1:3,17:20:53.91:673,54,0	1/1:0,15:15:45.11:565,45,0	0/0:28,0:28:81.27:0,81,1213	1/1:1,13:14:33.11:428,33,0	1/1:0,17:16:42.14:544,42,0	1/1:0,22:22:66.21:857,66,0	1/1:0,17:17:48.16:622,48,0	0/0:19,0:19:57.18:0,57,834	0/0:28,0:28:84.27:0,84,1235	0/0:7,0:7:21.07:0,21,315
chr10	8075913	.	GA	G	2799.54	PASS	AB=1.000;AC=15;AF=0.278;AN=54;BaseQRankSum=9.761;DP=368;FS=33.300;HRun=7;HaplotypeScore=35.8825;InbreedingCoeff=0.8390;MQ=68.31;MQ0=0;MQRankSum=2.963;QD=23.72;ReadPosRankSum=-0.442;VQSLOD=1.3494;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:27.09:0,27,340	0/0:5,0:5:12.04:0,12,151	0/0:4,0:4:6.01:0,6,75	0/1:6,0:6:15.47:15,0,57	1/1:4,23:27:66.15:673,66,0	0/0:9,0:9:21.07:0,21,264	0/0:4,0:4:12.04:0,12,151	1/1:4,24:28:72.12:717,72,0	0/0:11,0:11:27.09:0,27,340	0/0:18,0:18:54.17:0,54,679	0/0:20,0:20:57.18:0,57,717	0/0:9,0:9:27.09:0,27,340	0/0:17,0:17:42.13:0,42,515	0/0:12,0:12:36.12:0,36,453	1/1:0,8:8:24.05:245,24,0	1/1:0,10:10:30.07:306,30,0	0/0:20,0:20:57.14:0,57,699	0/0:24,1:25:38.58:0,39,793	0/0:18,0:18:54.17:0,54,679	0/0:24,0:24:72.22:0,72,892	0/0:7,0:7:21.07:0,21,264	0/0:2,0:2:6.02:0,6,75	0/0:10,0:10:30.10:0,30,378	./.	0/0:26,0:26:66.20:0,66,819	1/1:2,16:18:13.37:452,13,0	1/1:1,18:19:51.12:520,51,0	1/1:0,2:2:6.01:61,6,0
chr10	8077234	.	AT	A	13163.86	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-4.953;DP=523;FS=9.742;HRun=7;HaplotypeScore=67.4836;InbreedingCoeff=0.9891;MQ=77.82;MQ0=0;MQRankSum=-7.714;QD=26.54;ReadPosRankSum=5.233;VQSLOD=5.0287;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,11:11:33.07:336,33,0	1/1:1,14:14:36.08:367,36,0	0/0:16,0:16:38.92:0,39,379	0/0:11,0:11:19.49:0,19,212	1/1:4,23:27:63.14:643,63,0	1/1:1,23:24:60.13:611,60,0	1/1:0,8:8:18.04:184,18,0	1/1:3,38:41:99:1163,114,0	1/1:0,9:9:24.05:245,24,0	1/1:0,22:22:66.15:673,66,0	1/1:0,21:21:57.13:580,57,0	1/1:0,13:13:39.09:398,39,0	1/1:1,22:23:54.12:551,54,0	1/1:3,13:16:36.08:366,36,0	1/1:1,20:21:60.14:612,60,0	1/1:0,11:11:33.08:337,33,0	1/1:0,25:25:72.16:735,72,0	1/1:2,8:10:21.05:214,21,0	1/1:1,17:18:51.08:510,51,0	1/1:0,31:31:84.19:857,84,0	1/1:1,14:15:42.10:429,42,0	1/1:3,20:23:48.08:480,48,0	1/1:2,16:17:45.10:459,45,0	1/1:0,12:12:36.08:367,36,0	1/1:2,24:26:66.15:673,66,0	1/1:0,15:15:45.10:458,45,0	1/1:8,19:27:51.10:519,51,0	1/1:1,13:14:39.09:398,39,0
chr10	8077705	.	AAG	A	3453.91	PASS	AB=0.902;AC=22;AF=0.393;AN=56;BaseQRankSum=6.768;DP=610;FS=7.493;HRun=0;HaplotypeScore=126.2088;InbreedingCoeff=-0.1051;MQ=42.86;MQ0=126;MQRankSum=1.557;QD=8.42;ReadPosRankSum=1.346;VQSLOD=3.1282;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:17:38.87:0,39,451	0/1:8,2:9:36.35:143,0,36	0/1:12,0:5:4.47:4,0,133	0/0:6,0:4:8.74:0,9,111	0/0:26,0:19:50.47:0,50,505	0/1:24,5:24:73.67:126,0,74	0/1:18,0:12:94.57:235,0,95	0/0:28,0:22:63.19:0,63,771	0/1:19,2:15:23.91:128,0,24	0/1:14,6:18:53.84:361,0,54	0/1:24,3:22:42.10:308,0,42	0/1:15,3:8:33.32:33,0,38	0/1:13,5:15:46.16:163,0,46	1/1:29,2:17:0.45:183,0,0	0/0:24,0:21:59.93:0,60,850	0/0:16,0:13:39.13:0,39,540	1/1:24,1:12:8.23:117,8,0	0/1:19,0:13:83.48:179,0,83	0/1:11,1:7:59.70:118,0,60	0/1:30,3:32:99:364,0,339	0/0:13,0:5:12.04:0,12,148	1/1:23,3:18:13.23:267,13,0	1/1:19,4:14:12.63:286,13,0	0/1:30,0:17:13.12:118,0,13	0/1:33,5:36:99:320,0,142	0/0:32,0:23:24.76:0,25,791	0/0:14,0:12:23.53:0,24,247	0/0:14,0:9:21.05:0,21,245
chr10	8077707	.	G	GA	4515.53	PASS	AB=0.876;AC=26;AF=0.464;AN=56;BaseQRankSum=10.940;DP=628;FS=13.851;HRun=2;HaplotypeScore=128.0990;InbreedingCoeff=0.2252;MQ=44.28;MQ0=123;MQRankSum=-0.212;QD=10.60;ReadPosRankSum=2.281;VQSLOD=1.8943;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:16:35.99:0,36,402	0/1:6,5:10:10.72:187,0,11	0/1:13,0:6:4.74:5,0,159	0/0:7,0:5:9.03:0,9,111	0/0:25,0:18:39.76:0,40,513	0/1:25,3:23:70.48:188,0,70	0/1:18,0:12:62.84:235,0,63	0/0:28,0:22:63.13:0,63,757	1/1:19,3:17:8.53:190,9,0	1/1:21,1:20:4.54:386,5,0	1/1:21,7:23:4.29:400,4,0	0/1:21,0:11:42.31:92,0,42	0/1:16,2:16:1.72:201,0,2	1/1:30,0:16:32.09:274,32,0	0/0:25,0:22:60.18:0,60,728	0/0:16,0:13:39.11:0,39,452	1/1:23,2:13:26.81:237,27,0	0/1:16,4:14:29.71:263,0,30	0/1:13,2:10:47.87:170,0,48	0/1:29,7:35:99:458,0,157	0/0:15,0:7:12.04:0,12,148	1/1:22,4:18:1.44:288,1,0	1/1:20,3:14:27.67:274,28,0	1/1:28,2:17:5.99:164,6,0	0/1:26,13:37:30.60:501,0,31	0/0:32,0:24:26.77:0,27,691	0/0:15,0:13:27.06:0,27,305	0/0:13,0:8:18.06:0,18,222
chr10	8077712	.	AG	A	5503.16	PASS	AB=0.778;AC=20;AF=0.357;AN=56;BaseQRankSum=9.103;DP=620;FS=12.820;HRun=1;HaplotypeScore=130.8982;InbreedingCoeff=-0.0756;MQ=50.75;MQ0=94;MQRankSum=-1.555;QD=13.69;ReadPosRankSum=3.751;VQSLOD=3.0756;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:17:42.08:0,42,555	0/1:6,7:12:14.53:251,0,15	0/0:17,0:10:22.26:0,22,332	0/0:9,0:7:18.02:0,18,243	0/0:24,0:20:56.86:0,57,674	0/1:19,8:22:58.71:176,0,59	0/1:15,0:12:51.42:266,0,51	0/0:31,0:25:71.25:0,71,948	1/1:14,7:17:26.92:295,27,0	0/1:14,9:21:29.33:510,0,29	1/1:20,11:26:7.35:473,7,0	0/1:14,6:11:36.05:171,0,36	0/1:10,9:17:30.85:257,0,31	0/1:23,2:16:21:233,0,21	0/0:23,0:23:66.10:0,66,913	0/0:17,0:14:42.04:0,42,567	1/1:20,5:15:32.82:320,33,0	0/1:13,5:14:67.07:271,0,67	0/1:11,6:12:41.85:316,0,42	0/1:22,13:34:99:603,0,194	0/0:15,0:7:18.06:0,18,255	0/1:17,7:17:47.65:311,0,48	0/1:18,7:16:4.22:319,0,4	0/1:22,3:17:42.64:186,0,43	0/1:20,19:37:41.06:545,0,41	0/0:29,0:24:30.29:0,30,887	0/0:15,0:13:26.98:0,27,338	0/0:13,0:8:18.06:0,18,248
chr10	8077771	.	AC	A	235.81	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-3.547;DP=490;FS=2.372;HRun=2;HaplotypeScore=170.3529;InbreedingCoeff=0.9825;MQ=76.87;MQ0=0;MQRankSum=1.361;QD=21.44;ReadPosRankSum=-1.215;VQSLOD=3.2191;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:40.74:0,41,173	0/0:13,0:13:34.88:0,35,161	0/0:16,0:16:48.14:0,48,685	0/0:11,0:11:27.77:0,28,441	0/0:18,1:19:31.33:0,31,213	0/0:21,0:21:48.22:0,48,228	0/0:11,0:11:25.78:0,26,113	0/0:28,0:28:73.37:0,73,367	0/0:20,0:21:43.56:0,44,195	0/0:26,0:26:69.18:0,69,362	0/0:25,0:25:58.19:0,58,293	0/0:17,0:17:37.13:0,37,155	0/0:22,0:22:56:0,56,240	0/0:15,0:15:28.65:0,29,150	0/0:19,0:19:40.03:0,40,176	0/0:10,0:10:23.37:0,23,105	0/0:15,0:15:37.40:0,37,167	0/0:7,0:7:16.92:0,17,63	0/0:14,0:14:36.68:0,37,168	0/0:28,0:28:68.96:0,69,329	1/1:1,10:11:33.05:330,33,0	0/0:17,0:17:47.40:0,47,248	0/0:16,0:16:39.42:0,39,188	0/0:14,0:14:32.34:0,32,153	0/0:25,0:25:59.02:0,59,276	0/0:25,0:25:69.01:0,69,355	0/0:16,0:16:36.13:0,36,173	0/0:11,0:11:30.72:0,31,147
chr10	8077773	.	CTA	C	20685.42	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=3.401;DP=482;FS=2.767;HRun=0;HaplotypeScore=104.0134;InbreedingCoeff=0.9962;MQ=78.74;MQ0=0;MQRankSum=-8.690;QD=45.56;ReadPosRankSum=5.410;VQSLOD=6.3747;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,15:18:51.13:802,51,0	1/1:0,13:13:39.13:636,39,0	0/0:17,0:17:51.13:0,51,958	0/0:11,0:11:27.77:0,28,585	1/1:1,17:18:48.16:780,48,0	1/1:0,19:19:51.17:832,51,0	1/1:0,11:11:30.10:489,30,0	1/1:0,28:28:84.29:1367,84,0	1/1:1,19:20:57.19:928,57,0	1/1:1,25:26:78.26:1251,78,0	1/1:0,24:24:60.20:979,60,0	1/1:0,16:16:45.15:733,45,0	1/1:0,22:22:66.23:1075,66,0	1/1:0,13:13:36.12:585,36,0	1/1:0,18:18:48.16:782,48,0	1/1:1,8:9:27.09:440,27,0	1/1:1,14:15:42.14:685,42,0	1/1:0,7:7:21.07:342,21,0	1/1:0,14:14:42.14:683,42,0	1/1:0,28:28:78.27:1272,78,0	1/1:11,0:11:33.11:498,33,0	1/1:0,16:16:45.15:734,45,0	1/1:0,17:17:45.15:734,45,0	1/1:0,13:13:36.12:586,36,0	1/1:0,25:25:66.23:1076,66,0	1/1:2,23:25:75.26:1220,75,0	1/1:0,17:17:39.13:636,39,0	1/1:0,11:11:33.11:538,33,0
chr10	8077774	.	TA	T	3126.39	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=7.560;DP=482;FS=4.106;HRun=2;HaplotypeScore=156.9187;InbreedingCoeff=0.9843;MQ=78.74;MQ0=0;MQRankSum=-8.371;QD=6.89;ReadPosRankSum=4.861;VQSLOD=1.1907;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:18:35.52:112,36,0	1/1:13,0:13:28.86:91,29,0	0/0:17,0:17:48.16:0,48,688	0/0:10,0:11:24.75:0,25,375	1/1:17,1:18:36.23:122,36,0	1/1:19,0:19:37.74:119,38,0	1/1:11,0:11:22.20:70,22,0	1/1:28,0:28:63.06:210,63,0	1/1:20,0:20:42.18:133,42,0	1/1:26,0:26:55.51:175,56,0	1/1:24,0:24:44.40:140,44,0	1/1:16,0:16:33.30:105,33,0	1/1:22,0:22:48.84:154,49,0	1/1:13,0:13:26.94:86,27,0	1/1:18,0:18:35.52:112,36,0	1/1:9,0:9:19.98:63,20,0	1/1:15,0:15:31.08:98,31,0	1/1:7,0:7:15.92:52,16,0	1/1:14,0:14:31.84:112,32,0	1/1:28,0:28:57.88:183,58,0	1/1:1,10:11:33.05:330,33,0	1/1:16,0:16:33.30:105,33,0	1/1:17,0:17:33.30:105,33,0	1/1:13,0:13:26.64:84,27,0	1/1:25,0:25:48.84:154,49,0	1/1:25,0:25:54.84:172,55,0	1/1:17,0:17:28.86:91,29,0	1/1:11,0:11:24.42:77,24,0
chr10	8078401	.	AACACACACACACACACAC	A	7323.32	PASS	AB=0.878;AC=35;AF=0.673;AN=52;BaseQRankSum=7.213;DP=483;FS=0.000;HRun=0;HaplotypeScore=233.1934;InbreedingCoeff=0.0678;MQ=62.12;MQ0=7;MQRankSum=-5.327;QD=20.46;ReadPosRankSum=1.686;VQSLOD=3.4252;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:35:30.10:0,30,1580	0/1:9,0:15:34.61:124,0,35	./.	0/0:30,0:27:15.05:0,15,352	0/1:19,0:18:22.10:83,0,22	1/1:12,1:21:27.09:816,27,0	0/1:10,0:16:99:169,0,149	0/0:27,0:24:9.90:0,10,166	1/1:10,0:17:1.19:156,1,0	1/1:18,0:18:9.02:322,9,0	1/1:4,12:18:18.06:652,18,0	1/1:5,7:12:12.04:583,12,0	1/1:7,7:15:6.40:787,6,0	1/1:7,5:12:9.03:419,9,0	0/1:13,0:13:14.91:273,0,15	0/1:5,0:5:43.72:101,0,44	1/1:12,0:20:0.91:82,1,0	./.	0/1:20,0:25:24.56:387,0,25	0/1:10,0:16:7.81:74,0,8	0/0:11,0:11:3.01:0,3,158	1/1:16,2:19:12.04:397,12,0	1/1:5,15:21:17.09:693,17,0	1/1:14,8:22:3.01:146,3,0	1/1:9,0:18:15.05:428,15,0	0/1:11,1:12:63.49:184,0,63	0/1:15,0:15:3.94:311,0,4	1/1:4,0:4:6.02:137,6,0
chr10	8078434	.	ACACACACACACAC	A	5395.83	PASS	AB=0.965;AC=24;AF=0.429;AN=56;BaseQRankSum=12.328;DP=480;FS=27.327;HRun=0;HaplotypeScore=178.9738;InbreedingCoeff=-0.5284;MQ=52.10;MQ0=27;MQRankSum=-8.681;QD=17.46;ReadPosRankSum=10.360;VQSLOD=1.6969;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:81.27:0,81,2598	0/1:9,0:9:77.64:217,0,78	0/0:38,0:8:21.03:0,21,257	0/0:48,0:17:21.02:0,21,429	0/1:12,3:16:91.78:150,0,92	0/1:14,0:12:42.66:677,0,43	0/1:19,0:19:77.11:77,0,319	0/0:22,0:19:14.23:0,14,226	0/1:13,0:12:99:132,0,143	0/1:13,0:11:99:122,0,251	0/1:16,0:16:45.70:285,0,46	0/1:11,0:12:99:299,0,127	0/1:16,0:16:99:390,0,258	0/1:9,0:8:60.71:209,0,61	0/1:17,4:21:75.06:478,0,75	0/1:10,2:12:92.85:163,0,93	0/1:22,0:22:45.21:45,0,364	0/0:8,0:7:18.06:0,18,221	0/1:16,0:15:99:244,0,312	0/1:8,0:8:40.28:40,0,93	0/0:17,0:15:20.90:0,21,416	0/1:13,0:11:99:150,0,197	0/1:24,0:24:99:347,0,211	1/1:15,0:15:3.48:82,3,0	0/1:13,0:13:99:375,0,124	0/1:8,1:8:32.19:193,0,32	1/1:4,5:9:1.28:553,1,0	0/1:8,1:9:22.78:168,0,23
chr10	8079385	.	C	CAAA	17824.84	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=1.239;DP=530;FS=10.251;HRun=5;HaplotypeScore=126.8487;InbreedingCoeff=0.9154;MQ=75.53;MQ0=0;MQRankSum=-9.107;QD=39.18;ReadPosRankSum=3.020;VQSLOD=3.0482;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:75.24:0,75,1105	1/1:1,0:5:8.83:144,9,0	0/0:28,0:28:52.94:0,53,810	0/0:17,0:15:38.77:0,39,510	1/1:4,0:17:32.94:419,33,0	1/1:3,0:25:48.16:761,48,0	1/1:1,0:22:45.15:735,45,0	1/1:6,0:23:60.19:904,60,0	1/1:0,1:18:42.14:678,42,0	1/1:0,14:15:45.15:961,45,0	1/1:2,17:21:60.21:1250,60,0	1/1:3,15:18:39.13:827,39,0	1/1:1,18:19:45.15:968,45,0	1/1:2,17:19:48.16:1026,48,0	1/1:0,0:24:42.14:548,42,0	1/1:0,1:21:51.17:694,51,0	1/1:0,0:28:69.24:1109,69,0	1/1:0,10:10:30.10:646,30,0	1/1:1,0:29:83.93:1355,84,0	1/1:2,0:23:56.68:902,57,0	1/1:0,0:16:2.68:11,3,0	1/1:0,14:15:45.11:874,45,0	1/1:3,8:12:20.82:377,21,0	1/1:4,16:20:40.85:841,41,0	1/1:0,0:15:24.08:385,24,0	1/1:1,0:17:45.13:657,45,0	1/1:2,0:17:39.13:548,39,0	1/1:1,0:6:15.05:204,15,0
chr10	8080012	.	T	TCACACA	972.55	PASS	AB=0.942;AC=35;AF=0.648;AN=54;BaseQRankSum=4.264;DP=299;FS=20.983;HRun=0;HaplotypeScore=76.6607;InbreedingCoeff=0.1532;MQ=28.31;MQ0=39;MQRankSum=-3.298;QD=3.94;ReadPosRankSum=-1.854;VQSLOD=-0.1686;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:17:3.30:7,3,0	1/1:5,0:5:9.38:104,9,0	./.	0/0:2,0:1:3.01:0,3,40	0/0:11,0:9:2.68:0,3,11	1/1:12,0:10:0.47:1,0,0	1/1:19,0:14:5.03:23,5,0	0/1:14,0:12:2.76:3,0,81	1/1:6,0:6:0.47:1,0,0	0/1:13,0:11:43.40:337,0,43	1/1:12,0:12:0.94:2,1,0	1/1:8,0:8:0.94:2,1,0	0/1:4,8:12:0:0,0,0	1/1:10,0:7:0.47:1,0,0	1/1:15,0:13:7.42:72,7,0	1/1:14,0:13:11.35:125,11,0	0/1:13,0:9:5.87:87,0,6	0/0:9,0:6:6.27:0,6,32	1/1:3,0:3:8.96:143,9,0	0/0:14,0:13:0.39:0,0,0	0/0:5,0:3:2.98:0,3,21	1/1:10,0:6:0.47:1,0,0	1/1:21,0:20:0.94:2,1,0	0/0:11,0:9:2.92:0,3,18	0/1:15,0:10:17.38:30,0,17	0/1:10,0:10:15.95:81,0,16	0/1:9,0:9:27.07:27,0,42	1/1:5,0:3:0.28:52,0,0
chr10	8080044	.	ACCTCT	A	582.95	PASS	AB=0.947;AC=16;AF=0.320;AN=50;BaseQRankSum=-1.329;DP=258;FS=0.000;HRun=0;HaplotypeScore=60.8161;InbreedingCoeff=0.0527;MQ=27.88;MQ0=15;MQRankSum=1.054;QD=5.03;ReadPosRankSum=5.036;VQSLOD=0.6511;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:10,0:9:1.44:14,0,1	1/1:3,0:3:5.41:130,5,0	./.	0/0:2,0:1:3.01:0,3,62	0/0:14,0:13:3.48:0,3,81	0/0:9,1:12:2.36:0,2,5	0/1:15,1:16:27.22:27,0,63	0/0:11,0:10:24.52:0,25,566	./.	0/1:10,1:10:53.63:54,0,627	0/0:11,1:12:1.41:0,1,3	0/0:6,0:6:1.89:0,2,4	./.	0/0:7,0:7:0:0,0,0	1/1:14,0:13:0.21:58,0,0	1/1:11,0:9:13.16:217,13,0	0/1:10,0:10:30.85:31,0,189	1/1:3,2:2:3.01:51,3,0	0/1:8,0:7:9.17:9,0,353	0/0:18,0:18:1.89:0,2,5	0/0:7,1:6:0.63:0,1,2	0/0:8,0:6:0.47:0,0,1	0/0:17,1:18:1.41:0,1,3	0/0:6,0:6:0.94:0,1,2	0/1:10,0:10:0.85:23,0,1	0/0:6,0:6:10.27:0,10,463	0/1:8,0:8:43.64:44,0,176	0/1:5,0:4:51.56:52,0,123
chr10	8081443	.	G	GGAA	927.13	PASS	AB=0.991;AC=21;AF=0.404;AN=52;BaseQRankSum=0.405;DP=804;FS=0.000;HRun=0;HaplotypeScore=148.1603;InbreedingCoeff=-0.4428;MQ=20.87;MQ0=273;MQRankSum=1.082;QD=1.47;ReadPosRankSum=-1.989;VQSLOD=2.2245;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:17:9.57:81,0,10	0/1:16,0:10:12.21:12,0,54	./.	./.	0/1:32,0:22:41.40:88,0,41	0/1:28,0:17:9.02:32,0,9	0/0:46,0:9:4.11:0,4,79	0/1:39,0:24:99:173,0,105	0/0:22,0:9:5.84:0,6,37	0/1:57,0:33:76.90:77,0,287	0/0:20,0:13:14.77:0,15,97	0/1:24,0:6:6.52:7,0,41	0/1:18,0:9:7.30:23,0,7	1/1:14,0:4:4.21:23,4,0	0/1:31,0:17:55.62:63,0,56	0/1:28,0:13:23.86:102,0,24	0/1:23,0:12:4.41:4,0,79	0/0:21,0:9:4.51:0,5,25	0/1:26,0:14:23.22:23,0,149	0/1:36,0:33:41.56:42,0,116	0/0:54,0:17:15.90:0,16,86	0/1:31,2:25:81.07:81,0,139	0/1:28,1:20:5.92:6,0,76	0/1:20,0:11:0.40:0,0,0	0/1:53,2:39:95.67:96,0,186	0/1:65,0:37:78.52:79,0,381	0/0:10,0:4:2.22:0,2,7	0/1:24,0:11:2.84:56,0,3
chr10	8081485	.	GGAA	G	2320.27	PASS	AB=0.993;AC=35;AF=0.625;AN=56;BaseQRankSum=-3.872;DP=655;FS=38.757;HRun=0;HaplotypeScore=114.2248;InbreedingCoeff=0.2586;MQ=29.73;MQ0=172;MQRankSum=0.963;QD=4.36;ReadPosRankSum=-3.131;VQSLOD=0.0976;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:23,4:19:29.25:303,29,0	1/1:7,4:6:3:25,3,0	0/0:13,0:5:6.03:0,6,49	0/1:13,0:4:7.64:8,0,38	0/0:35,0:27:0.44:0,0,237	1/1:19,1:14:18.65:122,19,0	1/1:34,0:13:32.74:246,33,0	0/0:18,0:11:25.92:0,26,175	1/1:21,1:10:8.94:66,9,0	0/1:31,0:18:12.02:148,0,12	0/1:18,0:15:2.41:98,0,2	1/1:15,0:8:16.20:122,16,0	1/1:13,0:10:17.80:126,18,0	0/1:16,0:8:9.39:50,0,9	0/1:18,0:10:14.47:14,0,141	0/0:26,0:15:23.99:0,24,335	1/1:27,1:18:24.73:271,25,0	1/1:19,0:8:8.93:64,9,0	1/1:17,0:8:8.07:131,8,0	0/1:21,1:18:2.07:104,0,2	1/1:38,0:13:11.93:92,12,0	0/1:30,0:22:12.80:99,0,13	1/1:22,0:17:9.34:97,9,0	1/1:16,0:12:5.06:80,5,0	0/1:45,1:37:9.61:222,0,10	0/1:56,0:37:6.97:7,0,418	0/0:7,0:4:6:0,6,54	0/0:24,0:12:17.97:0,18,158
chr10	8082726	.	AT	A	14942.02	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=10.487;DP=650;FS=3.410;HRun=7;HaplotypeScore=87.6294;InbreedingCoeff=0.9529;MQ=89.65;MQ0=0;MQRankSum=-4.143;QD=28.35;ReadPosRankSum=4.450;VQSLOD=5.2241;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,129,1580	1/1:1,0:1:3.01:30,3,0	0/0:28,0:28:69.21:0,69,841	0/0:20,0:20:45.08:0,45,527	1/1:3,34:37:96.21:979,96,0	1/1:0,12:12:36.08:367,36,0	1/1:3,19:22:48.10:490,48,0	1/1:1,26:27:78.16:788,78,0	1/1:1,26:27:72.16:735,72,0	1/1:1,32:33:93.19:940,93,0	1/1:0,18:18:48.10:490,48,0	1/1:0,19:19:57.13:582,57,0	1/1:0,25:25:75.17:765,75,0	1/1:1,23:24:66.15:673,66,0	1/1:1,24:25:69.16:704,69,0	1/1:0,17:17:48.11:490,48,0	1/1:3,25:27:69.15:704,69,0	1/1:1,26:27:78.18:796,78,0	1/1:2,19:21:57.11:574,57,0	1/1:2,22:24:66.15:673,66,0	0/0:29,0:29:78.21:0,78,963	1/1:0,19:19:54.12:551,54,0	1/1:0,15:15:42.09:429,42,0	1/1:0,15:15:45.10:459,45,0	1/1:1,22:23:66.15:673,66,0	1/1:0,29:29:84.19:857,84,0	1/1:0,26:26:78.18:796,78,0	1/1:0,13:13:39.09:398,39,0
chr10	8084396	.	TA	T	14174.40	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=7.033;DP=678;FS=6.466;HRun=2;HaplotypeScore=74.2039;InbreedingCoeff=0.9997;MQ=85.10;MQ0=0;MQRankSum=0.516;QD=35.98;ReadPosRankSum=4.213;VQSLOD=5.4258;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,111,1580	1/1:0,9:9:24.08:311,24,0	0/0:23,0:23:42.02:0,42,653	0/0:28,0:28:81.82:0,82,1048	0/0:28,0:28:84.22:0,84,1219	1/1:0,29:29:81.25:1051,81,0	1/1:0,27:27:69.22:895,69,0	0/0:32,0:32:90.29:0,90,1327	1/1:0,31:31:84.27:1089,84,0	1/1:0,24:24:66.16:824,66,0	1/1:0,18:18:54.14:683,54,0	1/1:1,25:26:75.24:973,75,0	1/1:0,22:22:63.20:814,63,0	1/1:1,34:35:99:1284,99,0	0/0:33,0:33:93.05:0,93,1265	0/0:25,0:25:72.24:0,72,1066	1/1:0,14:14:33.11:428,33,0	1/1:0,15:15:39.13:506,39,0	1/1:0,24:24:72.19:903,72,0	1/1:0,23:23:66.15:835,66,0	0/0:22,0:22:57.15:0,57,829	1/1:0,24:24:72.23:933,72,0	1/1:0,22:22:63.20:817,63,0	1/1:0,26:26:78.25:1012,78,0	1/1:0,25:25:63.20:817,63,0	0/0:23,0:23:69.23:0,69,1032	0/0:18,0:18:54.14:0,54,764	0/0:15,0:15:45.15:0,45,674
chr10	8084524	.	G	GTAGCTCTCTGGGTATGACGACC	29747.14	PASS	AB=0.682;AC=55;AF=0.982;AN=56;BaseQRankSum=0.331;DP=265;FS=28.486;HRun=0;HaplotypeScore=293.6852;InbreedingCoeff=-0.0632;MQ=87.76;MQ0=0;MQRankSum=-2.494;QD=112.25;ReadPosRankSum=2.239;VQSLOD=3.2961;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,0:10:21.54:1332,22,0	1/1:3,0:3:6.02:503,6,0	1/1:9,1:13:30.97:1856,31,0	0/1:8,0:15:48.58:1585,0,49	1/1:8,0:8:7.84:234,8,0	1/1:6,0:6:9.03:527,9,0	1/1:8,0:8:15.05:875,15,0	1/1:15,0:15:45.15:2952,45,0	1/1:14,0:13:24.04:1236,24,0	1/1:18,0:18:37.94:2446,38,0	1/1:8,0:8:8.77:302,9,0	1/1:9,0:9:27.09:2155,27,0	1/1:12,0:12:27.09:1706,27,0	1/1:12,0:12:21.07:1376,21,0	1/1:8,0:8:9.90:365,10,0	1/1:13,0:13:27.09:1375,27,0	1/1:2,0:2:3.01:223,3,0	1/1:3,0:3:6.02:235,6,0	1/1:6,0:6:17.09:974,17,0	1/1:8,0:8:14.74:420,15,0	1/1:6,0:6:3.01:67,3,0	1/1:8,0:8:8.82:373,9,0	1/1:13,0:13:11.63:720,12,0	1/1:7,0:7:6.02:422,6,0	1/1:7,0:7:6.02:388,6,0	1/1:12,0:12:36.12:2740,36,0	1/1:14,0:14:30.09:2033,30,0	1/1:7,0:7:9.03:328,9,0
chr10	8084525	.	T	TAGCTCTCTGGGTATGACGACCCCA	2566.10	PASS	AB=0.714;AC=25;AF=0.962;AN=26;BaseQRankSum=-2.303;DP=44;FS=11.975;HRun=0;HaplotypeScore=37.5698;InbreedingCoeff=-0.2057;MQ=165.70;MQ0=0;MQRankSum=-0.446;QD=69.35;ReadPosRankSum=0.371;VQSLOD=0.9953;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,0:2:3.48:51,3,0	./.	1/1:4,1:8:19.29:1200,19,0	0/1:6,0:10:63.63:827,0,64	./.	./.	./.	./.	./.	1/1:1,0:1:3.01:49,3,0	./.	./.	1/1:2,0:2:3.01:49,3,0	./.	1/1:1,0:1:3:25,3,0	1/1:3,0:3:3.01:105,3,0	./.	1/1:2,0:2:3.01:49,3,0	1/1:1,0:1:3.01:56,3,0	1/1:1,0:1:2.97:20,3,0	1/1:2,0:2:3.01:67,3,0	./.	./.	./.	./.	./.	1/1:2,0:2:2.99:24,3,0	1/1:2,0:2:6.02:125,6,0
chr10	8087536	.	GTATATATATATATATATA	G	6057.43	PASS	AC=30;AF=0.625;AN=48;BaseQRankSum=0.678;DP=320;FS=4.017;HRun=0;HaplotypeScore=135.3703;InbreedingCoeff=0.6596;MQ=60.06;MQ0=9;MQRankSum=-2.699;QD=30.75;ReadPosRankSum=4.238;VQSLOD=3.7089;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:6,8:13:3.01:148,3,0	1/1:2,3:5:6.02:297,6,0	0/0:11,0:2:3.01:0,3,42	0/0:29,0:9:12.03:0,12,175	0/0:4,0:7:6.02:0,6,210	1/1:5,12:17:3.01:148,3,0	1/1:2,3:5:5.98:168,6,0	0/0:17,0:26:48.16:0,48,1617	1/1:7,2:9:6.02:297,6,0	1/1:8,14:22:38.94:1164,39,0	1/1:5,16:21:12.04:571,12,0	1/1:3,5:8:9.03:425,9,0	1/1:5,6:10:9.03:445,9,0	1/1:3,8:12:6.02:297,6,0	./.	0/0:0,0:1:3.01:0,3,80	1/1:4,12:16:8.99:314,9,0	1/1:3,3:5:3.01:148,3,0	1/1:7,9:14:27.07:905,27,0	1/1:10,9:19:5.98:136,6,0	./.	./.	./.	0/0:3,1:4:0:0,0,0	1/1:4,10:14:12.04:593,12,0	0/0:4,0:5:9.03:0,9,200	0/0:6,0:11:18.05:0,18,373	0/0:4,0:8:18.06:0,18,555
chr10	8089512	.	C	CA	184.12	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-1.834;DP=358;FS=9.530;HRun=7;HaplotypeScore=46.7548;InbreedingCoeff=0.7862;MQ=74.83;MQ0=0;MQRankSum=0.579;QD=18.41;ReadPosRankSum=-1.233;VQSLOD=2.1440;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:45.07:0,45,434	0/0:12,0:12:36.06:0,36,347	0/0:12,0:8:23.99:0,24,222	0/0:11,0:11:31.82:0,32,276	0/0:13,0:13:30.04:0,30,289	0/0:13,0:13:33.05:0,33,318	0/0:20,0:20:54.03:0,54,512	0/0:22,0:22:57.07:0,57,545	0/0:11,0:11:30.04:0,30,289	0/0:23,0:23:66.05:0,66,624	0/0:10,0:10:21.03:0,21,203	0/0:15,0:15:33.03:0,33,312	0/0:13,0:13:39.06:0,39,376	0/0:19,0:19:57.09:0,57,550	0/0:14,0:14:36.05:0,36,347	0/0:9,0:9:21.03:0,21,203	0/0:12,0:12:30.04:0,30,290	0/0:7,0:7:15.02:0,15,145	0/0:16,0:16:45.07:0,45,435	0/0:5,0:5:6:0,6,58	1/1:2,8:10:24.06:277,24,0	0/0:12,0:12:30.05:0,30,289	0/0:6,0:6:18.03:0,18,174	0/0:9,0:9:24.02:0,24,225	0/0:3,0:3:6.01:0,6,58	0/0:19,0:19:45.95:0,46,436	0/0:17,0:17:51.08:0,51,491	0/0:6,0:6:15.02:0,15,145
chr10	8089847	.	TCACACA	T	205.61	PASS	AB=0.968;AC=11;AF=0.393;AN=28;BaseQRankSum=0.760;DP=478;FS=0.000;HRun=0;HaplotypeScore=134.0471;InbreedingCoeff=0.3527;MQ=65.74;MQ0=36;MQRankSum=1.267;QD=2.14;ReadPosRankSum=2.426;VQSLOD=2.3805;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	0/0:9,0:8:2.22:0,2,7	./.	./.	./.	./.	0/0:26,0:22:6.01:0,6,73	0/0:13,0:12:1.55:0,2,4	0/0:13,0:12:5.99:0,6,48	1/1:11,0:10:0.47:1,0,0	./.	./.	./.	1/1:12,0:13:3.01:59,3,0	./.	1/1:7,0:12:3.01:51,3,0	0/1:29,0:30:10.41:10,0,24	0/0:15,0:15:0.89:0,1,2	0/0:12,0:11:9.03:0,9,124	0/0:9,0:8:2.90:0,3,16	0/0:20,0:16:0:0,0,0	1/1:19,0:18:12:129,12,0	./.	./.	./.	1/1:8,0:7:3.01:54,3,0	./.	./.
chr10	8091046	.	T	TGAAAAGGAACAGAG	2001.28	PASS	AB=0.818;AC=30;AF=0.938;AN=32;BaseQRankSum=-2.238;DP=46;FS=12.661;HRun=0;HaplotypeScore=21.9499;InbreedingCoeff=-0.2064;MQ=119.71;MQ0=0;MQRankSum=-2.171;QD=54.09;ReadPosRankSum=-0.702;VQSLOD=1.0124;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	1/1:1,0:1:2.97:20,3,0	0/1:3,1:7:26.13:614,0,26	0/1:3,0:3:7.93:27,0,8	./.	./.	./.	1/1:2,0:2:6.02:136,6,0	./.	1/1:2,0:2:3.01:82,3,0	1/1:1,0:1:3.01:97,3,0	1/1:2,0:2:6.02:150,6,0	1/1:3,0:3:9:124,9,0	1/1:2,0:2:3.01:92,3,0	./.	./.	1/1:2,0:3:6.02:156,6,0	./.	1/1:2,0:2:6.01:106,6,0	./.	1/1:1,0:2:3.01:139,3,0	./.	1/1:3,0:3:9.03:196,9,0	1/1:1,0:1:3.01:74,3,0	./.	1/1:1,0:1:3:27,3,0	1/1:2,0:2:3.01:49,3,0	./.
chr10	8092375	.	AAC	A	3117.28	PASS	AB=0.713;AC=18;AF=0.321;AN=56;BaseQRankSum=-2.885;DP=652;FS=1.538;HRun=0;HaplotypeScore=113.4489;InbreedingCoeff=0.5970;MQ=59.44;MQ0=15;MQRankSum=3.405;QD=13.38;ReadPosRankSum=3.150;VQSLOD=3.7178;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:12,0:21:8.52:42,9,0	0/0:4,0:9:17.99:0,18,155	0/0:29,0:9:3.01:0,3,44	0/0:48,0:25:8.73:0,9,61	0/0:14,0:17:2.84:0,3,18	0/0:13,0:30:48.01:0,48,506	0/0:15,0:27:32.88:0,33,285	0/0:27,0:26:31.13:0,31,297	0/0:12,0:31:44.88:0,45,415	0/1:9,17:26:2.04:516,0,2	1/1:5,15:21:50.71:539,51,0	1/1:10,10:19:24.07:274,24,0	1/1:8,8:17:17.88:185,18,0	1/1:11,16:27:7.96:535,8,0	0/0:23,0:23:3:0,3,25	0/0:14,0:15:3:0,3,26	0/0:24,0:43:72.88:0,73,753	0/1:4,5:9:20.28:164,0,20	0/0:17,0:24:25.14:0,25,256	0/0:13,0:25:38.05:0,38,383	0/0:16,0:16:12:0,12,117	0/1:10,10:18:0.82:187,0,1	1/1:9,11:20:29.67:317,30,0	1/1:11,16:28:50.79:529,51,0	0/0:13,0:22:27.01:0,27,273	0/1:21,1:20:19.38:19,0,280	0/0:17,0:19:11.95:0,12,108	0/0:11,0:11:5.94:0,6,41
chr10	8093209	.	GTAGA	G	19247.99	PASS	AB=0.938;AC=35;AF=0.625;AN=56;BaseQRankSum=18.823;DP=805;FS=1.195;HRun=0;HaplotypeScore=160.9193;InbreedingCoeff=0.9222;MQ=79.07;MQ0=0;MQRankSum=-5.888;QD=40.02;ReadPosRankSum=3.717;VQSLOD=4.7290;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,154,3944	1/1:11,0:11:29.99:476,30,0	0/0:24,0:24:66.22:0,66,1598	0/0:18,0:18:48.13:0,48,1114	0/0:28,0:28:72.25:0,72,1824	1/1:22,0:22:60.12:1049,60,0	1/1:30,0:30:81.16:1378,81,0	0/0:22,0:22:60.21:0,60,1584	1/1:24,4:29:78.24:1400,78,0	1/1:3,37:40:99:1969,111,0	1/1:1,17:18:27.01:497,27,0	1/1:3,31:34:75.26:1380,75,0	1/1:1,23:24:60.21:1103,60,0	1/1:1,30:31:69.24:1269,69,0	0/0:44,0:44:99:0,123,3181	0/0:35,0:35:50.22:0,50,2488	1/1:27,0:27:72.22:1261,72,0	1/1:1,10:11:24.08:442,24,0	1/1:19,0:19:45.13:751,45,0	1/1:26,0:26:72.16:1223,72,0	0/0:52,2:54:92.30:0,92,3685	1/1:2,39:41:90.30:1655,90,0	1/1:1,24:25:48.64:884,49,0	1/1:4,34:37:72.25:1325,72,0	1/1:25,0:25:63.22:1157,63,0	0/1:28,2:30:29.03:29,0,1791	0/0:38,0:38:99:0,105,2667	0/0:6,0:6:18.06:0,18,475
chr10	8093214	.	TA	T	5380.55	PASS	AB=0.877;AC=30;AF=0.536;AN=56;BaseQRankSum=21.605;DP=795;FS=1.850;HRun=1;HaplotypeScore=165.1042;InbreedingCoeff=0.6951;MQ=80.40;MQ0=0;MQRankSum=-6.430;QD=12.04;ReadPosRankSum=5.833;VQSLOD=3.6949;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,157,2447	1/1:3,8:11:29.86:269,30,0	0/0:23,0:23:69.23:0,69,1078	0/0:21,0:21:57.13:0,57,831	0/0:26,0:26:78.27:0,78,1237	1/1:3,20:23:35.92:488,36,0	1/1:6,26:32:39.59:586,40,0	0/0:22,0:22:66.21:0,66,1034	1/1:6,24:30:54.46:551,54,0	0/1:40,0:40:20.24:280,0,20	1/1:17,0:17:21.34:74,21,0	0/1:33,0:33:12.27:141,0,12	0/1:25,0:26:10.19:121,0,10	1/1:31,0:31:54.54:190,55,0	0/0:43,0:43:99:0,129,2016	0/0:36,1:37:86.12:0,86,1676	1/1:3,22:25:71.77:614,72,0	1/1:11,0:11:2.03:46,2,0	0/1:3,15:18:22.16:362,0,22	1/1:3,24:27:71.53:598,72,0	0/0:52,0:52:99:0,145,2383	1/1:39,0:39:71.78:274,72,0	1/1:24,0:24:38.41:133,38,0	1/1:34,0:33:56.91:198,57,0	1/1:6,20:26:41.51:454,42,0	0/0:28,0:28:66.32:0,66,1186	0/0:37,0:37:99:0,108,1714	0/0:6,0:6:18.06:0,18,288
chr10	8093220	.	ATGG	A	5610.35	PASS	AB=0.621;AC=15;AF=0.268;AN=56;BaseQRankSum=5.881;DP=807;FS=2.676;HRun=0;HaplotypeScore=196.3892;InbreedingCoeff=0.9495;MQ=79.27;MQ0=0;MQRankSum=-7.509;QD=28.77;ReadPosRankSum=0.612;VQSLOD=5.0871;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,162,3706	1/1:4,7:11:27.07:320,27,0	0/0:22,0:22:63.19:0,63,1407	0/0:22,0:22:56.37:0,56,1289	0/0:24,0:24:72.23:0,72,1688	1/1:4,17:21:40.15:663,40,0	1/1:8,23:31:50.10:798,50,0	0/0:25,0:25:75.24:0,75,1725	1/1:11,23:34:65.57:959,66,0	0/0:44,0:44:99:0,108,783	0/0:18,0:18:25.39:0,25,133	0/0:34,0:34:71.87:0,72,518	0/0:29,0:29:57.39:0,57,451	0/0:34,0:34:72.43:0,72,363	0/0:46,0:46:99:0,138,3197	0/0:35,1:36:69.17:0,69,2308	1/1:4,22:26:57.51:828,58,0	0/0:10,0:10:25.40:0,25,164	0/1:7,11:18:0.74:464,0,1	1/1:5,22:27:53.67:774,54,0	0/0:51,0:51:99:0,150,3589	0/0:36,0:36:79.21:0,79,344	0/0:24,0:24:41.36:0,41,169	0/0:36,0:35:73.18:0,73,483	1/1:7,20:27:59.30:804,59,0	0/0:26,0:26:73.68:0,74,1694	0/0:34,0:34:99:0,102,2502	0/0:6,0:6:18.06:0,18,443
chr10	8093585	.	T	TG	4411.17	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-3.433;DP=579;FS=27.792;HRun=7;HaplotypeScore=73.6941;InbreedingCoeff=0.9880;MQ=73.63;MQ0=1;MQRankSum=1.334;QD=26.73;ReadPosRankSum=0.741;VQSLOD=3.0800;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:65.31:0,65,614	0/0:5,0:5:9.01:0,9,87	0/0:23,0:21:24.16:0,24,277	0/0:28,0:23:36.68:0,37,291	1/1:3,15:18:39.12:471,39,0	0/0:23,0:22:66.10:0,66,635	0/0:16,0:16:33.01:0,33,307	1/1:5,13:19:41.98:443,42,0	0/0:17,0:17:36.04:0,36,345	0/0:19,0:19:45.06:0,45,430	0/0:26,0:26:75.11:0,75,719	0/0:19,0:19:42.06:0,42,405	0/0:25,0:25:72.11:0,72,695	0/0:12,0:12:33.05:0,33,317	1/1:3,20:23:51.16:615,51,0	1/1:1,15:16:35.94:435,36,0	0/0:21,0:21:60.09:0,60,579	0/0:14,0:14:39.06:0,39,377	0/0:11,0:11:30.04:0,30,285	0/0:9,0:9:21.02:0,21,196	0/0:24,0:24:57.08:0,57,549	0/0:20,0:20:54.08:0,54,521	0/0:16,0:16:42.06:0,42,405	0/0:26,0:26:69.11:0,69,666	0/0:29,0:29:87.14:0,87,839	1/1:5,23:28:37.22:718,37,0	1/1:3,26:29:60.18:725,60,0	1/1:4,28:32:84.25:1005,84,0
chr10	8094749	.	GCACACACACA	G	4200.18	PASS	AB=0.950;AC=32;AF=0.615;AN=52;BaseQRankSum=0.434;DP=595;FS=0.000;HRun=0;HaplotypeScore=199.6826;InbreedingCoeff=0.6301;MQ=67.72;MQ0=15;MQRankSum=-3.889;QD=12.25;ReadPosRankSum=1.622;VQSLOD=1.9464;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:36:24.06:0,24,664	./.	./.	0/0:30,0:19:0:0,0,0	1/1:15,0:14:2.83:17,3,0	0/0:17,0:21:9.53:0,10,189	0/0:21,0:21:2.80:0,3,46	0/1:32,0:31:28.12:61,0,28	0/0:20,0:31:13.85:0,14,327	1/1:22,1:22:15.23:298,15,0	1/1:11,0:10:5.98:75,6,0	1/1:17,7:23:26.37:195,26,0	1/1:15,9:24:35.98:642,36,0	1/1:11,7:18:23.70:247,24,0	1/1:15,6:20:26.69:404,27,0	1/1:15,8:23:29.43:336,29,0	0/0:22,0:22:21.55:0,22,722	1/1:11,5:15:9.27:465,9,0	0/0:19,0:16:10.57:0,11,297	0/0:9,0:12:0.89:0,1,2	1/1:32,1:33:10.35:87,10,0	1/1:12,2:14:6.95:144,7,0	1/1:14,1:16:11.79:114,12,0	1/1:28,5:33:8.31:178,8,0	0/0:17,0:17:13.96:0,14,176	1/1:12,3:15:18.04:349,18,0	1/1:11,4:15:23.86:461,24,0	0/1:8,0:9:89.02:129,0,89
chr10	8094800	.	TAC	T	5858.31	PASS	AB=0.818;AC=24;AF=0.429;AN=56;BaseQRankSum=1.976;DP=848;FS=11.463;HRun=0;HaplotypeScore=306.3198;InbreedingCoeff=0.1134;MQ=46.33;MQ0=22;MQRankSum=0.417;QD=9.90;ReadPosRankSum=1.393;VQSLOD=3.4173;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:45:99:0,102,1626	0/0:7,0:7:18.06:0,18,223	0/1:33,1:16:2.81:3,0,412	0/0:45,0:23:49.34:0,49,697	0/1:14,3:16:53.15:53,0,77	0/0:21,0:20:30.05:0,30,347	0/0:28,0:28:58.68:0,59,681	0/1:32,30:59:99:815,0,181	0/0:28,0:28:30.31:0,30,361	0/1:31,3:32:69.17:259,0,69	0/1:14,3:17:49.39:148,0,49	0/1:32,12:44:79.90:459,0,80	1/1:18,10:27:27.09:334,27,0	0/1:35,11:46:70.51:376,0,71	0/1:35,8:43:25.57:542,0,26	1/1:23,10:31:18.78:455,19,0	0/0:27,0:25:55.72:0,56,660	1/1:15,8:21:11.52:301,12,0	0/0:22,0:19:46.83:0,47,462	0/0:8,0:8:17.42:0,17,192	1/1:13,38:48:13.16:386,13,0	0/1:11,22:33:19.46:198,0,19	0/1:18,5:23:36.61:232,0,37	1/1:33,17:50:13.06:368,13,0	0/0:23,0:22:4.10:0,4,381	0/1:21,5:26:32.20:451,0,32	1/1:11,8:19:23.55:418,24,0	0/1:6,1:7:33.50:60,0,33
chr10	8094832	.	GAC	G	2981.83	PASS	AB=0.761;AC=15;AF=0.268;AN=56;BaseQRankSum=3.635;DP=1017;FS=38.627;HRun=0;HaplotypeScore=320.6880;InbreedingCoeff=-0.3817;MQ=54.55;MQ0=11;MQRankSum=-6.639;QD=4.93;ReadPosRankSum=-2.411;VQSLOD=1.6535;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,105,1721	0/0:5,0:5:15.05:0,15,255	0/0:51,0:28:62.57:0,63,858	0/0:68,0:41:81.14:0,81,1119	0/0:14,14:28:1.07:0,1,575	0/0:18,0:18:39.13:0,39,650	0/0:28,1:29:36.24:0,36,1179	0/1:52,13:63:99:399,0,1421	0/0:23,0:23:51.16:0,51,816	0/1:22,19:41:99:608,0,536	0/1:13,14:27:99:206,0,407	0/1:32,18:50:99:157,0,940	0/1:23,13:36:98.63:99,0,669	0/1:39,7:46:62.99:63,0,710	0/1:34,17:51:99:132,0,1038	0/1:26,10:35:76.62:77,0,742	0/0:28,0:28:78.24:0,78,1255	0/1:14,10:23:99:268,0,304	0/0:19,0:14:39.10:0,39,633	0/0:13,0:13:36.11:0,36,579	0/0:64,0:64:99:0,108,1690	0/1:36,5:42:99:164,0,620	0/1:19,9:28:99:106,0,578	0/1:45,15:60:99:132,0,732	0/0:22,0:21:62.70:0,63,1017	0/1:32,9:41:99:194,0,1266	0/1:16,6:22:32.82:33,0,575	0/1:15,21:36:99:501,0,570
chr10	8095007	.	GCACA	G	1586.55	PASS	AB=0.920;AC=26;AF=0.520;AN=50;BaseQRankSum=-2.784;DP=644;FS=1.537;HRun=0;HaplotypeScore=183.7963;InbreedingCoeff=0.2090;MQ=48.69;MQ0=15;MQRankSum=2.822;QD=3.50;ReadPosRankSum=2.361;VQSLOD=2.1970;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:32,0:32:22.88:23,0,48	0/0:9,0:9:12.03:0,12,161	./.	./.	0/1:12,3:15:0:0,0,0	0/0:13,0:13:1.44:0,1,39	0/0:21,0:20:6.85:0,7,51	0/0:46,0:45:19.77:0,20,161	0/0:14,0:13:7.97:0,8,88	0/1:37,0:38:58.52:59,0,98	1/1:21,3:24:5.89:93,6,0	1/1:24,4:27:1.71:78,2,0	1/1:20,0:20:2.07:40,2,0	1/1:23,4:28:12.45:174,12,0	1/1:16,8:25:8.72:140,9,0	1/1:12,4:15:3.01:47,3,0	0/0:26,0:23:18.14:0,18,205	0/1:26,11:36:69.31:333,0,69	0/0:20,0:19:17.99:0,18,178	0/1:15,0:15:34.94:35,0,88	1/1:28,0:24:9.70:74,10,0	0/0:14,9:23:0.38:0,0,1	1/1:19,1:21:9.50:124,9,0	1/1:54,3:58:23.08:306,23,0	0/1:22,0:21:3.65:4,0,72	0/1:24,3:27:99:131,0,190	0/1:14,2:16:26.89:84,0,27	./.
chr10	8097974	.	GACAC	G	13123.41	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=17.583;DP=754;FS=0.000;HRun=0;HaplotypeScore=177.1285;InbreedingCoeff=0.9657;MQ=52.22;MQ0=24;MQRankSum=-9.548;QD=33.06;ReadPosRankSum=-1.807;VQSLOD=3.9120;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:38:83.76:0,84,1756	0/0:15,0:15:36.12:0,36,835	0/0:51,0:4:5.95:0,6,46	0/0:41,0:13:17.95:0,18,236	1/1:7,15:22:60.17:950,60,0	0/0:20,0:20:47.95:0,48,1113	0/0:16,0:18:41.93:0,42,957	1/1:9,24:33:72.12:1029,72,0	0/0:28,0:28:69.24:0,69,1695	1/1:11,19:30:77.68:1194,78,0	1/1:11,20:31:42.13:655,42,0	1/1:11,21:32:66.21:1092,66,0	1/1:8,15:23:51.17:845,51,0	1/1:8,14:22:33.11:560,33,0	1/1:9,22:31:67.42:1141,67,0	1/1:5,15:20:48.16:798,48,0	0/0:30,0:32:77.78:0,78,1607	1/1:6,5:11:17.80:301,18,0	0/0:34,0:31:78.19:0,78,1530	0/0:26,0:27:72.03:0,72,1710	0/0:30,0:30:78.25:0,78,1813	1/1:14,20:33:63.21:1036,63,0	1/1:7,21:27:42.14:714,42,0	1/1:10,11:21:24.52:375,25,0	0/0:20,1:21:6.03:0,6,1224	1/1:6,23:29:81.19:1287,81,0	1/1:7,16:23:57.17:894,57,0	1/1:1,6:7:15.05:255,15,0
chr10	8098041	.	AC	A	12174.04	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=18.489;DP=582;FS=11.683;HRun=2;HaplotypeScore=124.5169;InbreedingCoeff=0.9908;MQ=72.81;MQ0=0;MQRankSum=-3.927;QD=35.19;ReadPosRankSum=2.365;VQSLOD=3.2741;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:93.32:0,93,1394	0/0:7,0:7:21.07:0,21,314	0/0:10,0:11:25.20:0,25,429	0/0:13,0:13:12.33:0,12,430	1/1:0,19:19:48.16:623,48,0	0/0:15,0:15:45.15:0,45,675	0/0:19,0:19:57.18:0,57,836	1/1:1,26:27:78.24:999,78,0	0/0:27,0:27:81.27:0,81,1212	1/1:0,26:26:75.24:970,75,0	1/1:2,24:26:66.21:856,66,0	1/1:1,18:19:54.17:697,54,0	1/1:0,15:15:39.13:506,39,0	1/1:2,16:18:45.15:584,45,0	1/1:1,18:19:45.15:584,45,0	1/1:3,12:15:36.12:467,36,0	0/0:24,0:24:69.23:0,69,1033	1/1:0,14:14:39.13:504,39,0	0/0:24,0:24:72.21:0,72,1019	0/0:26,0:26:78.26:0,78,1167	0/0:19,0:19:57.19:0,57,853	1/1:2,25:27:75.24:973,75,0	1/1:0,28:28:81.26:1051,81,0	1/1:1,22:23:60.20:779,60,0	0/0:17,0:17:48.16:0,48,720	1/1:0,32:32:96.31:1246,96,0	1/1:2,31:33:93.30:1207,93,0	1/1:3,2:5:12.01:126,12,0
chr10	8098804	.	T	TA	3970.45	PASS	AB=0.588;AC=15;AF=0.268;AN=56;BaseQRankSum=-13.216;DP=546;FS=3.320;HRun=9;HaplotypeScore=48.9948;InbreedingCoeff=0.8894;MQ=82.03;MQ0=0;MQRankSum=0.794;QD=26.83;ReadPosRankSum=1.991;VQSLOD=4.1719;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:50.97:0,51,439	1/1:1,7:8:18.05:199,18,0	0/0:19,0:19:41.95:0,42,359	0/0:13,0:12:0.46:0,0,113	0/0:32,0:32:92.96:0,93,803	1/1:3,22:25:60.16:662,60,0	0/1:6,14:20:3.98:417,0,4	0/0:38,0:38:86.91:0,87,748	1/1:3,20:23:31.10:571,31,0	0/0:33,0:33:89.95:0,90,776	0/0:24,0:24:65.98:0,66,573	0/0:19,0:19:56.99:0,57,495	0/0:21,0:21:53.98:0,54,468	0/0:8,0:9:25.99:0,26,208	0/0:20,0:20:47.94:0,48,410	0/0:12,0:12:32.95:0,33,278	1/1:1,6:7:15.04:166,15,0	0/0:27,0:27:65.86:0,66,558	1/1:0,16:16:48.09:509,48,0	1/1:3,25:28:75.16:816,75,0	0/0:11,0:11:32.99:0,33,287	0/0:11,0:11:32.99:0,33,287	0/0:21,0:22:65.02:0,65,553	0/0:9,0:9:26.99:0,27,234	1/1:1,20:21:57.15:631,57,0	0/0:22,0:22:56.98:0,57,495	0/0:30,1:31:44.78:0,45,614	0/0:7,0:7:20.16:0,20,152
chr10	8099198	.	T	TA	5391.64	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-14.467;DP=492;FS=3.877;HRun=5;HaplotypeScore=43.1821;InbreedingCoeff=0.9949;MQ=73.95;MQ0=0;MQRankSum=-0.269;QD=36.19;ReadPosRankSum=1.306;VQSLOD=4.4448;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:8:18.04:0,18,193	1/1:1,10:11:30.10:395,30,0	0/0:8,0:8:24.06:0,24,253	0/0:10,0:10:24.04:0,24,249	0/0:28,0:28:78.18:0,78,830	1/1:0,27:27:75.24:987,75,0	1/1:1,12:13:33.11:434,33,0	0/0:33,0:33:75.18:0,75,806	1/1:1,18:19:51.17:671,51,0	0/0:19,0:19:54.13:0,54,580	0/0:20,0:20:60.15:0,60,644	0/0:13,0:13:39.08:0,39,411	0/0:19,0:19:51.13:0,51,548	0/0:17,0:17:48.10:0,48,508	0/0:17,0:17:48.12:0,48,516	0/0:16,0:16:48.10:0,48,507	1/1:0,12:12:33.11:434,33,0	0/0:28,0:28:72.14:0,72,755	1/1:2,21:23:60.17:773,60,0	1/1:1,31:32:93.30:1224,93,0	0/0:6,0:6:15.04:0,15,161	0/0:15,0:15:39.10:0,39,419	0/0:14,0:14:33.08:0,33,354	0/0:9,0:9:27.07:0,27,290	1/1:0,12:12:36.12:474,36,0	0/0:23,0:23:63.16:0,63,677	0/0:22,0:21:66.17:0,66,709	0/0:18,0:18:45.11:0,45,484
chr10	8099644	.	G	GGGATGGATGGAT	983.87	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=0.336;DP=641;FS=10.624;HRun=0;HaplotypeScore=211.7123;InbreedingCoeff=0.9841;MQ=65.05;MQ0=0;MQRankSum=-4.941;QD=32.80;ReadPosRankSum=-2.998;VQSLOD=1.7829;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:12,14:30:27.09:1078,27,0	0/0:9,0:9:24.07:0,24,762	0/0:29,0:25:36.09:0,36,886	0/0:29,0:25:47.95:0,48,1099	0/0:22,0:22:33.10:0,33,983	0/0:20,0:20:54.19:0,54,1794	0/0:15,0:15:27.08:0,27,731	0/0:43,0:43:54.17:0,54,1435	0/0:23,0:23:39.13:0,39,1319	0/0:31,0:31:72.23:0,72,2174	0/0:25,0:25:54.17:0,54,1635	0/0:15,0:15:39.13:0,39,1282	0/0:18,0:18:42.14:0,42,1400	0/0:23,0:23:66.21:0,66,2077	0/0:23,0:23:54.16:0,54,1606	0/0:20,0:20:45.13:0,45,1436	0/0:11,0:11:18.03:0,18,461	0/0:14,0:14:33.10:0,33,959	0/0:22,0:22:27.09:0,27,886	0/0:29,0:29:63.22:0,63,2114	0/0:28,0:28:54.19:0,54,1849	0/0:18,0:18:42.14:0,42,1299	0/0:28,0:28:51.16:0,51,1496	0/0:15,0:15:36.11:0,36,1063	0/0:24,0:24:63.21:0,63,2131	0/0:22,0:22:45.15:0,45,1370	0/0:35,0:34:90.30:0,90,2955	0/0:19,0:19:24.08:0,24,809
chr10	8099941	.	CAA	C	3560.99	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-3.678;DP=462;FS=7.044;HRun=10;HaplotypeScore=76.0565;InbreedingCoeff=0.9680;MQ=72.46;MQ0=2;MQRankSum=-1.255;QD=25.08;ReadPosRankSum=3.722;VQSLOD=3.3353;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:20:56.14:0,56,783	1/1:2,5:7:9.02:100,9,0	0/0:14,0:13:23.02:0,23,282	0/0:17,1:17:33.08:0,33,432	0/0:24,0:24:54.18:0,54,815	1/1:1,16:17:39.10:435,39,0	1/1:1,22:23:57.15:635,57,0	0/0:27,0:28:54.14:0,54,792	1/1:2,16:18:42.11:468,42,0	0/0:2,0:15:39.90:0,40,365	0/0:5,0:14:23.93:0,24,203	0/0:5,0:16:27.04:0,27,276	0/0:2,0:11:21.03:0,21,202	0/0:1,0:13:30.05:0,30,288	0/0:24,0:24:60.02:0,60,950	0/0:13,0:13:36.12:0,36,571	1/1:1,24:24:60.16:669,60,0	0/0:3,0:10:18.01:0,18,191	1/1:3,15:18:36.01:452,36,0	1/1:2,17:19:45.10:501,45,0	0/0:24,0:24:57.19:0,57,896	0/0:3,0:15:35.42:0,35,331	0/0:4,0:13:20.81:0,21,196	0/0:1,0:7:6.01:0,6,57	1/1:1,13:14:27.07:301,27,0	0/0:17,0:18:35.59:0,36,509	0/0:13,0:13:30.10:0,30,474	0/0:9,0:9:21.06:0,21,312
chr10	8100059	.	G	GTT	4200.27	PASS	AB=1.000;AC=37;AF=0.661;AN=56;BaseQRankSum=1.199;DP=408;FS=4.754;HRun=13;HaplotypeScore=85.2930;InbreedingCoeff=0.8614;MQ=62.25;MQ0=12;MQRankSum=-4.617;QD=15.73;ReadPosRankSum=-3.270;VQSLOD=2.2048;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:1,0:16:30.19:0,30,130	1/1:3,4:10:24.02:268,24,0	0/1:14,0:10:7.37:7,0,21	0/0:10,0:7:6.53:0,7,49	0/0:11,0:11:17.80:0,18,158	1/1:3,8:13:23.56:290,24,0	1/1:7,6:13:24.07:310,24,0	0/0:24,0:21:32.77:0,33,290	1/1:6,5:10:14.94:157,15,0	1/1:7,2:12:17.50:190,18,0	1/1:5,6:13:27.03:325,27,0	1/1:5,8:13:15.05:200,15,0	1/1:3,3:6:5.97:60,6,0	1/1:5,6:13:17.99:197,18,0	0/0:11,0:11:17.62:0,18,144	0/0:13,0:12:14.87:0,15,132	1/1:10,8:18:29.04:302,29,0	1/1:4,4:8:11.47:93,11,0	1/1:14,1:16:25.25:271,25,0	1/1:16,8:23:40.88:470,41,0	1/1:7,0:12:10.48:50,10,0	1/1:8,11:19:33.38:378,33,0	1/1:9,9:18:23.52:270,24,0	1/1:7,0:5:5.91:39,6,0	1/1:9,12:21:27.03:324,27,0	0/0:14,0:16:29.79:0,30,308	0/0:22,0:24:29.50:0,29,352	0/0:14,0:13:32.97:0,33,291
chr10	8107588	.	A	ATCTCTCTCTCTCTC	4096.98	PASS	AB=0.894;AC=25;AF=0.500;AN=50;BaseQRankSum=-5.374;DP=516;FS=0.916;HRun=0;HaplotypeScore=186.7349;InbreedingCoeff=0.4788;MQ=55.51;MQ0=13;MQRankSum=0.730;QD=14.95;ReadPosRankSum=-2.227;VQSLOD=2.1015;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:11,0:13:0:0,0,0	1/1:7,2:7:4.26:205,4,0	0/0:20,0:16:9.03:0,9,255	0/1:23,0:14:1.28:1,0,72	0/0:28,0:28:5.77:0,6,667	1/1:13,8:21:0.47:1,0,0	1/1:8,0:8:6.02:202,6,0	1/1:45,0:40:54.16:1052,54,0	1/1:7,9:16:5.95:201,6,0	0/0:19,0:19:12.93:0,13,342	./.	0/0:15,0:15:10.80:0,11,297	0/0:21,0:21:3.01:0,3,98	0/0:14,0:14:3.48:0,3,99	0/0:11,0:22:0.47:0,0,1	1/1:9,0:13:6.02:89,6,0	1/1:8,0:9:9.03:413,9,0	0/0:13,0:14:8.03:0,8,97	1/1:18,3:17:18.05:502,18,0	./.	0/0:10,0:13:0.89:0,1,2	0/0:5,0:11:0.47:0,0,1	0/1:25,0:25:1.08:5,0,1	0/1:13,0:12:0:0,0,0	./.	0/1:9,0:18:75.37:733,0,75	1/1:15,0:24:6.49:182,6,0	1/1:11,0:11:16.30:510,16,0
chr10	8107604	.	CTCTCTCTCTCTCTGTGTGTGTG	C	3733.49	PASS	AB=0.743;AC=17;AF=0.304;AN=56;BaseQRankSum=6.440;DP=482;FS=4.793;HRun=0;HaplotypeScore=190.7880;InbreedingCoeff=0.6215;MQ=46.34;MQ0=17;MQRankSum=-3.124;QD=21.58;ReadPosRankSum=2.590;VQSLOD=2.4047;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:18:15.89:0,16,482	0/0:11,0:9:21.05:0,21,848	0/0:15,0:11:29.92:0,30,1066	0/0:17,0:8:15.05:0,15,510	0/0:25,0:25:60.19:0,60,3833	0/0:23,0:23:12.51:0,13,593	0/0:9,0:8:12.04:0,12,460	0/0:38,0:32:87.30:0,87,3595	0/0:16,0:16:15.52:0,16,755	1/1:2,20:22:41.60:1369,42,0	1/1:5,16:21:3.01:153,3,0	1/1:2,12:13:15.05:915,15,0	1/1:3,14:16:2.73:184,3,0	1/1:2,14:16:8.70:503,9,0	0/0:21,0:21:12.04:0,12,527	0/0:13,0:13:18.06:0,18,1033	0/0:9,0:8:13.74:0,14,326	0/1:7,5:13:99:108,0,188	0/0:17,0:13:36.11:0,36,1658	0/0:18,0:15:8.99:0,9,245	0/0:7,0:7:3.01:0,3,145	1/1:16,1:16:4.56:102,5,0	1/1:9,16:25:6.49:341,6,0	0/1:2,10:11:0:0,0,0	0/0:22,0:20:15.05:0,15,759	0/1:16,0:14:58.73:59,0,1662	0/0:18,0:18:21.07:0,21,1042	0/0:10,0:10:30.10:0,30,1336
chr10	8107714	.	ATAGTTGTGTT	A	10830.17	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=14.367;DP=475;FS=1.809;HRun=0;HaplotypeScore=166.5200;InbreedingCoeff=0.9792;MQ=96.84;MQ0=0;MQRankSum=-13.454;QD=80.82;ReadPosRankSum=1.391;VQSLOD=5.0053;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:58.73:0,59,3072	0/0:6,0:6:18.06:0,18,971	0/0:24,0:24:72.20:0,72,2901	0/0:30,0:30:81.23:0,81,3768	0/0:24,0:24:72.25:0,72,3849	0/0:28,0:28:84.29:0,84,4513	0/0:18,0:18:54.17:0,54,2772	0/0:20,0:20:60.21:0,60,3100	0/0:20,0:20:60.21:0,60,3227	1/1:1,17:18:51.17:1612,51,0	1/1:0,15:15:36.12:1218,36,0	1/1:1,11:12:33.11:1068,33,0	1/1:1,22:23:57.20:1932,57,0	1/1:2,19:21:48.16:1627,48,0	0/0:19,0:19:51.17:0,51,2735	0/0:12,0:12:36.12:0,36,1871	0/0:12,0:12:33.10:0,33,1601	1/1:1,3:4:9.03:305,9,0	0/0:11,0:11:33.11:0,33,1643	0/0:19,0:19:57.20:0,57,3035	0/0:11,0:11:30.10:0,30,1568	1/1:2,18:20:51.18:1728,51,0	1/1:1,14:15:33.11:1119,33,0	1/1:1,5:6:11.60:221,12,0	0/0:21,0:21:63.22:0,63,3245	0/0:23,0:23:69.24:0,69,3674	0/0:18,0:18:54.19:0,54,2898	0/0:4,0:4:12.04:0,12,637
chr10	8107891	.	GTAT	G	1568.51	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=13.675;DP=622;FS=8.612;HRun=0;HaplotypeScore=96.9349;InbreedingCoeff=0.9510;MQ=67.70;MQ0=15;MQRankSum=2.225;QD=10.74;ReadPosRankSum=-2.083;VQSLOD=2.0562;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:76.74:0,77,734	0/0:15,0:15:44.82:0,45,397	0/0:20,0:14:23.07:0,23,268	0/0:15,0:12:25.91:0,26,232	1/1:2,24:25:31.61:179,32,0	0/0:31,0:30:87.95:0,88,707	0/0:27,0:25:74.74:0,75,599	1/1:2,29:29:81.24:506,81,0	0/0:26,0:26:72.40:0,72,562	0/0:28,0:28:83.45:0,83,661	0/0:16,0:16:47.75:0,48,373	0/0:15,0:14:34.51:0,35,269	0/0:31,0:30:79.11:0,79,583	0/0:22,0:22:59.88:0,60,445	1/1:2,17:18:5.95:42,6,0	1/1:22,0:21:59.07:420,59,0	0/0:25,0:25:74.84:0,75,605	0/0:20,0:17:44.65:0,45,331	0/0:16,0:15:43.23:0,43,394	0/0:22,0:22:57.82:0,58,442	0/0:12,0:12:35.86:0,36,286	0/0:27,0:27:72.46:0,72,599	0/0:24,0:24:61.76:0,62,470	0/0:30,0:30:80.88:0,81,667	0/0:19,0:19:52.87:0,53,418	1/1:2,0:18:43.38:278,43,0	1/1:16,0:16:43.61:313,44,0	1/1:4,10:14:3.81:18,4,0
chr10	8108348	.	ATTTT	A	12932.08	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-5.928;DP=628;FS=7.542;HRun=12;HaplotypeScore=130.1720;InbreedingCoeff=0.9820;MQ=67.17;MQ0=4;MQRankSum=-2.762;QD=29.26;ReadPosRankSum=4.642;VQSLOD=2.9490;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,0:58:8.77:88,9,0	0/0:1,0:9:27:0,27,346	0/0:10,0:9:18.06:0,18,359	0/0:12,0:11:15.15:0,15,448	1/1:4,20:24:48.09:726,48,0	0/0:6,0:18:47.89:0,48,614	0/0:7,0:25:65.96:0,66,875	1/1:8,14:22:42.06:588,42,0	0/0:6,0:17:45.14:0,45,602	1/1:6,22:28:63.14:951,63,0	1/1:2,19:21:45.09:681,45,0	1/1:0,23:22:51.17:772,51,0	1/1:2,21:22:54.18:817,54,0	1/1:1,29:31:69.21:1023,69,0	1/1:3,14:18:42.11:614,42,0	1/1:3,21:24:54.16:817,54,0	0/0:8,0:30:81.16:0,81,1067	1/1:0,12:12:30.10:454,30,0	0/0:5,0:12:21.07:0,21,262	0/0:7,0:25:66.10:0,66,827	1/1:2,27:30:72.21:1090,72,0	1/1:2,19:20:45.11:681,45,0	1/1:0,19:19:54.17:817,54,0	1/1:1,21:22:48.16:726,48,0	0/0:4,0:27:72.13:0,72,868	1/1:4,23:27:68.34:1041,68,0	1/1:8,27:34:56.81:862,57,0	1/1:0,4:4:12.04:182,12,0
chr10	8109219	.	A	AAC	5151.89	PASS	AB=0.912;AC=26;AF=0.464;AN=56;BaseQRankSum=-5.375;DP=638;FS=5.091;HRun=0;HaplotypeScore=125.2650;InbreedingCoeff=0.0550;MQ=70.46;MQ0=13;MQRankSum=0.748;QD=10.76;ReadPosRankSum=0.222;VQSLOD=3.9939;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:14,20:35:48.03:205,0,48	1/1:10,0:10:16.12:96,16,0	0/1:50,0:31:23.46:23,0,38	0/0:36,0:25:3.37:0,3,35	0/0:26,0:27:56.38:0,56,561	0/1:30,0:31:0.27:304,0,0	0/1:36,0:35:35.38:297,0,35	0/0:21,0:22:21.70:0,22,92	0/1:21,0:21:26.48:185,0,26	1/1:12,3:15:32.89:458,33,0	0/1:12,2:14:48.25:199,0,48	0/1:15,1:16:2.70:255,0,3	1/1:18,7:25:46.66:629,47,0	0/1:16,3:18:1.78:341,0,2	0/0:9,0:14:29.63:0,30,158	0/0:10,0:15:19.44:0,19,90	1/1:32,0:31:51.92:426,52,0	0/1:16,2:18:11.77:220,0,12	1/1:17,0:16:10.73:104,11,0	0/1:22,0:22:22.55:125,0,23	1/1:22,0:21:18.03:139,18,0	0/1:13,2:16:19.74:130,0,20	0/1:16,3:19:5.10:232,0,5	0/1:34,5:41:28.44:616,0,28	0/1:18,0:18:70.87:165,0,71	0/0:21,0:23:39.32:0,39,193	0/0:9,0:17:34.81:0,35,167	0/0:0,0:3:2.84:0,3,14
chr10	8109260	.	T	TCA	1612.66	PASS	AB=0.828;AC=16;AF=0.286;AN=56;BaseQRankSum=-4.965;DP=624;FS=3.642;HRun=0;HaplotypeScore=143.5956;InbreedingCoeff=0.1981;MQ=51.81;MQ0=30;MQRankSum=0.001;QD=6.40;ReadPosRankSum=-1.021;VQSLOD=3.3789;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:37:38.27:0,38,380	0/0:9,0:9:12.03:0,12,136	0/0:14,0:2:2.59:0,3,32	0/1:19,0:3:5.06:5,0,22	0/0:13,0:32:22.73:0,23,112	0/0:34,0:34:52.31:0,52,480	0/0:29,0:28:22.07:0,22,311	0/0:21,0:22:5.41:0,5,16	0/0:24,0:22:31.87:0,32,267	1/1:13,1:22:13.20:123,13,0	0/0:8,0:18:2.74:0,3,12	0/1:5,9:16:15.59:215,0,16	0/1:20,3:24:69.18:224,0,69	0/1:14,2:15:12.23:216,0,12	0/0:11,0:24:11.22:0,11,56	0/0:15,0:18:10.81:0,11,55	0/0:27,0:26:43.90:0,44,463	1/1:7,6:14:3.01:46,3,0	0/1:6,0:6:1.68:2,0,15	0/0:23,0:25:25.28:0,25,233	1/1:26,1:22:28.71:228,29,0	1/1:11,10:21:7.11:146,7,0	0/1:7,12:18:19.29:166,0,19	0/1:18,23:39:56.16:382,0,56	0/0:19,0:20:23.25:0,23,219	0/1:12,0:23:20.75:21,0,51	0/0:9,0:20:7.18:0,7,101	0/0:5,0:4:2.84:0,3,14
chr10	8110087	.	A	ACT	2593.19	PASS	AB=0.707;AC=40;AF=0.741;AN=54;BaseQRankSum=-2.721;DP=547;FS=21.981;HRun=0;HaplotypeScore=143.6579;InbreedingCoeff=0.3107;MQ=53.14;MQ0=11;MQRankSum=1.713;QD=5.88;ReadPosRankSum=1.837;VQSLOD=1.8624;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:18:4.41:0,4,26	1/1:4,7:12:7.81:228,8,0	0/0:20,0:11:0.28:0,0,14	0/0:29,0:16:11.95:0,12,100	0/1:6,0:16:0:0,0,0	1/1:9,19:28:3.82:139,4,0	1/1:13,1:14:5.57:90,6,0	1/1:27,0:26:31.42:178,31,0	1/1:23,2:25:30.66:316,31,0	0/1:9,0:15:14.33:129,0,14	0/1:6,0:14:0.10:0,0,0	1/1:21,0:23:13.88:113,14,0	0/1:17,0:28:1.21:1,0,95	0/0:8,0:15:0.47:0,0,1	1/1:11,0:12:2.60:10,3,0	0/1:5,0:17:10.09:10,0,29	1/1:13,17:30:22.22:392,22,0	0/1:7,0:7:4.80:37,0,5	1/1:26,1:26:5.31:181,5,0	1/1:24,3:28:6.10:186,6,0	1/1:17,0:17:5.99:49,6,0	1/1:6,0:14:2.60:11,3,0	1/1:11,0:15:11.73:87,12,0	./.	1/1:13,2:14:16.49:177,16,0	1/1:7,0:18:32.55:291,33,0	1/1:7,0:21:8.88:79,9,0	1/1:4,0:4:2.99:24,3,0
chr10	8110099	.	TCTCACACA	T	1433.89	PASS	AB=0.957;AC=9;AF=0.167;AN=54;BaseQRankSum=-4.012;DP=520;FS=9.548;HRun=0;HaplotypeScore=165.3310;InbreedingCoeff=-0.1187;MQ=48.25;MQ0=11;MQRankSum=2.380;QD=7.97;ReadPosRankSum=-3.482;VQSLOD=1.2530;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:17:4.63:0,5,112	0/0:10,0:10:15.51:0,16,148	0/0:24,0:10:26.06:0,26,524	0/0:28,0:12:17.05:0,17,466	0/0:21,0:18:7.69:0,8,77	0/1:28,0:28:25.16:25,0,149	0/1:15,0:15:49.15:165,0,49	0/0:29,0:27:66.68:0,67,976	0/1:25,0:25:99:441,0,311	0/0:14,0:13:38.90:0,39,688	0/0:13,0:13:2.35:0,2,73	0/0:21,0:20:20.52:0,21,309	0/0:19,0:19:18.02:0,18,408	1/1:13,0:11:1.25:3,1,0	0/0:16,0:16:6.01:0,6,78	0/0:15,0:15:11.95:0,12,182	0/1:32,0:31:99:164,0,403	0/0:6,0:6:15.01:0,15,305	0/1:12,9:20:99:335,0,194	0/1:31,0:31:99:357,0,245	0/0:20,0:19:12.01:0,12,197	0/0:12,0:11:5.37:0,5,37	0/0:17,0:16:11.75:0,12,116	./.	0/1:15,0:15:71.23:71,0,128	0/0:21,0:18:45.08:0,45,974	0/0:15,0:14:14.45:0,14,256	0/0:2,0:2:3.46:0,3,25
chr10	8110101	.	TCACACA	T	1741.71	PASS	AB=0.926;AC=12;AF=0.222;AN=54;BaseQRankSum=-3.107;DP=559;FS=2.234;HRun=0;HaplotypeScore=167.4233;InbreedingCoeff=0.1113;MQ=47.69;MQ0=11;MQRankSum=3.083;QD=9.47;ReadPosRankSum=-2.712;VQSLOD=2.3576;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:20:7.17:0,7,163	0/1:10,1:11:19.67:52,0,20	0/0:26,0:11:24.08:0,24,516	0/0:26,0:11:15.03:0,15,367	0/0:21,0:19:5.71:0,6,143	0/1:25,1:26:30.07:47,0,30	1/1:13,1:15:12.04:211,12,0	0/0:35,0:33:48.64:0,49,1127	0/1:22,1:24:13.20:519,0,13	0/0:19,0:17:35.95:0,36,731	0/0:14,0:14:2.27:0,2,73	0/0:16,0:24:11.67:0,12,216	0/0:21,0:21:18.05:0,18,411	1/1:12,0:10:0.89:2,1,0	0/0:6,0:20:6.02:0,6,116	0/0:17,0:17:9.03:0,9,149	0/1:28,1:29:99:185,0,142	0/0:7,0:7:15.05:0,15,298	0/1:20,0:19:25.05:311,0,25	0/1:24,4:31:48.80:448,0,49	0/0:19,0:18:8.98:0,9,213	0/0:15,0:14:2.84:0,3,29	0/0:20,0:18:5.78:0,6,108	./.	1/1:15,0:15:3.98:109,4,0	0/0:24,0:21:45.12:0,45,877	0/0:15,0:14:9.03:0,9,219	0/0:6,0:6:6.02:0,6,111
chr10	8110824	.	CT	C	4452.54	PASS	AB=0.585;AC=49;AF=0.875;AN=56;BaseQRankSum=-2.165;DP=580;FS=2.915;HRun=14;HaplotypeScore=78.4160;InbreedingCoeff=0.7021;MQ=74.11;MQ0=1;MQRankSum=-0.043;QD=8.39;ReadPosRankSum=5.689;VQSLOD=4.2800;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,21:29:59.15:406,59,0	1/1:2,3:5:8.92:62,9,0	0/0:25,0:16:19.16:0,19,162	0/0:15,0:14:5.91:0,6,65	1/1:6,2:25:38.03:132,38,0	1/1:7,20:28:27.70:327,28,0	1/1:8,13:24:34.52:225,35,0	1/1:6,1:21:31.15:102,31,0	1/1:4,6:11:13.86:88,14,0	1/1:10,16:27:44.87:293,45,0	1/1:10,14:23:32.50:223,32,0	1/1:0,11:11:23.77:164,24,0	1/1:8,7:15:9.44:129,9,0	1/1:7,13:20:32.67:226,33,0	1/1:2,0:17:20.60:60,21,0	1/1:2,0:16:26.47:76,26,0	1/1:12,16:29:12.38:224,12,0	1/1:5,12:17:28.51:203,29,0	1/1:11,8:19:7.77:150,8,0	1/1:15,22:40:14.51:335,15,0	0/0:7,0:7:4.17:0,4,20	1/1:5,13:18:23.78:180,24,0	1/1:5,16:22:37.57:252,38,0	1/1:4,7:11:17.81:123,18,0	0/1:7,17:24:2.21:187,0,2	1/1:12,1:35:40.78:128,41,0	1/1:6,0:33:45.71:132,46,0	1/1:4,0:8:8.13:23,8,0
chr10	8111771	.	A	AC	7363.61	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-12.764;DP=609;FS=3.831;HRun=4;HaplotypeScore=59.6051;InbreedingCoeff=0.9674;MQ=88.01;MQ0=0;MQRankSum=-1.208;QD=34.09;ReadPosRankSum=1.030;VQSLOD=5.5251;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,23:27:60.20:821,60,0	1/1:0,14:14:33.11:450,33,0	0/0:25,0:25:69.11:0,69,755	0/0:21,0:21:56.86:0,57,608	1/1:2,22:24:59.78:796,60,0	0/0:24,0:24:66.19:0,66,749	0/0:22,0:22:60.17:0,60,680	1/1:7,26:33:81.22:1071,81,0	0/0:20,0:20:57.16:0,57,645	0/0:14,0:14:42.10:0,42,467	0/0:17,0:17:45.13:0,45,510	0/0:17,0:17:48.12:0,48,535	0/0:17,0:17:48.14:0,48,544	0/0:18,0:18:54.14:0,54,603	1/1:2,16:18:51.17:693,51,0	1/1:2,13:15:2.06:417,2,0	0/0:41,0:41:99:0,117,1312	0/0:41,0:41:99:0,114,1279	0/0:17,0:17:45.11:0,45,500	0/0:16,0:16:42.10:0,42,466	1/1:2,33:35:87.29:1190,87,0	0/0:16,0:16:39.11:0,39,442	0/0:22,0:22:66.19:0,66,747	0/0:24,0:24:63.18:0,63,714	0/0:21,0:21:57.09:0,57,618	1/1:1,19:20:57.19:779,57,0	1/1:0,24:25:69.23:941,69,0	1/1:0,5:5:15.05:205,15,0
chr10	8112012	.	C	CATTTCCCTGCCCTC	1727.18	PASS	AB=0.600;AC=25;AF=0.962;AN=26;BaseQRankSum=-2.358;DP=40;FS=8.239;HRun=0;HaplotypeScore=21.4094;InbreedingCoeff=-0.1860;MQ=132.94;MQ0=0;MQRankSum=-0.818;QD=50.80;ReadPosRankSum=0.818;VQSLOD=1.1242;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	1/1:2,1:5:10.28:411,10,0	0/1:2,0:6:31.47:539,0,31	1/1:2,0:2:3:25,3,0	./.	./.	1/1:2,0:2:3:27,3,0	./.	1/1:4,0:4:9.03:199,9,0	./.	./.	./.	1/1:1,0:2:6.02:181,6,0	1/1:4,0:4:3.01:58,3,0	./.	1/1:2,0:2:6.02:88,6,0	1/1:1,0:1:2.99:24,3,0	./.	./.	1/1:1,0:1:3.01:41,3,0	1/1:2,0:2:6.01:75,6,0	./.	./.	1/1:2,0:2:3.01:49,3,0	1/1:0,0:1:3.01:92,3,0	./.	./.
chr10	8112091	.	A	AT	15596.60	PASS	AB=0.751;AC=54;AF=0.964;AN=56;BaseQRankSum=-2.576;DP=390;FS=4.058;HRun=0;HaplotypeScore=115.8751;InbreedingCoeff=-0.0428;MQ=49.28;MQ0=1;MQRankSum=-3.477;QD=39.99;ReadPosRankSum=3.766;VQSLOD=4.6431;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,15:16:42.14:659,42,0	1/1:0,5:5:15.05:239,15,0	0/1:7,4:10:99:165,0,151	0/1:7,3:8:70.31:127,0,70	1/1:0,14:14:30.10:477,30,0	1/1:1,10:11:30.10:478,30,0	1/1:1,15:16:42.14:658,42,0	1/1:3,15:18:48.15:734,48,0	1/1:0,11:11:33.11:525,33,0	1/1:2,29:31:90.30:1406,90,0	1/1:0,22:22:57.19:905,57,0	1/1:0,8:8:21.07:334,21,0	1/1:1,12:13:27.09:430,27,0	1/1:0,5:5:15.05:239,15,0	1/1:1,14:15:42.14:667,42,0	1/1:1,8:9:21.03:307,21,0	1/1:0,11:11:24.08:382,24,0	1/1:0,8:8:24.08:383,24,0	1/1:2,11:13:39.13:618,39,0	1/1:2,24:26:63.21:1002,63,0	1/1:0,7:7:21.07:335,21,0	1/1:0,13:13:33.11:525,33,0	1/1:1,24:25:66.23:1050,66,0	1/1:0,15:15:33.11:524,33,0	1/1:1,25:27:69.24:1092,69,0	1/1:0,14:14:42.14:670,42,0	1/1:2,12:14:36.12:573,36,0	1/1:0,2:2:6.02:95,6,0
chr10	8112622	.	A	ATT	17066.13	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-6.251;DP=615;FS=6.840;HRun=8;HaplotypeScore=81.6813;InbreedingCoeff=0.9963;MQ=77.51;MQ0=2;MQRankSum=-6.345;QD=29.32;ReadPosRankSum=5.039;VQSLOD=4.7012;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,27:32:72.25:1143,72,0	1/1:1,9:10:27.09:418,27,0	0/0:15,0:15:33.01:0,33,346	0/0:17,0:17:29.78:0,30,363	1/1:4,32:37:92.36:1356,92,0	1/1:1,15:16:45.15:714,45,0	1/1:3,20:23:51.17:810,51,0	1/1:6,20:26:60.19:913,60,0	1/1:1,16:19:41.62:609,42,0	1/1:2,0:31:41.80:215,42,0	1/1:2,0:15:33.63:138,34,0	1/1:2,25:29:77.23:1143,77,0	1/1:1,10:13:29.59:437,30,0	1/1:4,9:15:29.32:400,29,0	1/1:2,0:28:64.88:223,65,0	1/1:2,17:20:48.16:762,48,0	1/1:1,24:26:72.14:1112,72,0	1/1:1,0:18:42.42:146,42,0	1/1:5,31:36:96.29:1471,96,0	1/1:2,21:23:63.17:955,63,0	1/1:2,11:13:27.09:428,27,0	1/1:0,0:23:52.40:180,52,0	1/1:3,0:30:59.89:206,60,0	1/1:1,0:12:24.95:86,25,0	1/1:2,13:16:36.12:552,36,0	1/1:2,23:27:74.71:1107,75,0	1/1:5,25:31:74.23:1112,74,0	1/1:0,9:9:27.09:429,27,0
chr10	8115206	.	ATGTG	A	7440.84	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-0.874;DP=700;FS=1.658;HRun=0;HaplotypeScore=138.7817;InbreedingCoeff=0.8509;MQ=62.34;MQ0=11;MQRankSum=3.922;QD=19.58;ReadPosRankSum=5.836;VQSLOD=4.2329;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:35:51.38:0,51,1012	1/1:3,4:7:9.03:144,9,0	0/0:29,0:19:6.02:0,6,86	0/0:23,0:12:9.03:0,9,140	1/1:7,15:23:38.96:602,39,0	1/1:7,18:25:39.13:609,39,0	1/1:8,9:17:21.03:308,21,0	1/1:19,7:25:4.46:269,4,0	1/1:7,13:22:32.89:472,33,0	0/0:30,0:26:61.03:0,61,828	0/0:11,0:19:6.49:0,6,123	1/1:5,14:19:45.15:706,45,0	1/1:5,11:17:26.81:411,27,0	1/1:5,17:24:27.06:411,27,0	0/0:15,0:41:20.23:0,20,213	1/1:9,15:26:17.20:568,17,0	1/1:18,21:38:47.70:751,48,0	0/0:13,0:30:24.08:0,24,465	1/1:22,4:25:12.03:191,12,0	1/1:14,9:25:33.49:422,33,0	0/0:18,0:41:42.14:0,42,730	0/0:8,0:19:0.47:0,0,2	0/0:14,0:27:9.56:0,10,128	0/0:7,0:21:5.94:0,6,93	1/1:12,12:24:39.57:597,40,0	1/1:13,6:21:24.05:338,24,0	1/1:14,17:33:41.53:594,42,0	1/1:5,1:6:3.01:48,3,0
chr10	8115729	.	GA	G	9894.88	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=13.022;DP=560;FS=32.940;HRun=1;HaplotypeScore=84.8208;InbreedingCoeff=0.9965;MQ=64.29;MQ0=0;MQRankSum=-1.485;QD=34.72;ReadPosRankSum=0.315;VQSLOD=2.6471;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:61.04:0,61,356	1/1:0,7:7:18.06:251,18,0	0/0:26,0:24:59.48:0,59,830	0/0:19,0:17:16.34:0,16,531	1/1:0,13:13:33.11:461,33,0	1/1:0,16:16:36.07:480,36,0	1/1:0,22:22:51.17:712,51,0	1/1:1,11:12:33.10:444,33,0	1/1:2,19:21:63.16:843,63,0	0/0:29,0:29:84.22:0,84,1186	0/0:23,0:23:69.20:0,69,989	1/1:1,24:25:41.17:756,41,0	1/1:0,21:21:45.15:625,45,0	1/1:1,16:17:32.37:460,32,0	0/0:31,0:31:93.29:0,93,1371	1/1:0,22:22:57.19:797,57,0	1/1:0,22:22:56.75:789,57,0	0/0:21,0:21:63.19:0,63,941	1/1:0,9:9:27.09:377,27,0	1/1:0,13:13:36.08:480,36,0	0/0:22,0:22:56.36:0,56,257	0/0:24,0:24:69.23:0,69,1052	0/0:19,0:19:57.16:0,57,817	0/0:28,0:28:81.21:0,81,1191	1/1:0,24:24:63.21:875,63,0	1/1:0,14:14:42.13:570,42,0	1/1:3,15:18:51.14:677,51,0	1/1:3,6:9:24.05:300,24,0
chr10	8116398	.	C	CCAACCAAAAG	790.45	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.631;DP=684;FS=0.000;HRun=0;HaplotypeScore=190.8835;InbreedingCoeff=0.9902;MQ=57.50;MQ0=3;MQRankSum=-3.371;QD=46.50;ReadPosRankSum=-2.351;VQSLOD=3.0152;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,105,3496	0/0:11,0:11:30.10:0,30,946	0/0:32,0:22:57.15:0,57,1530	0/0:28,0:26:71.91:0,72,1912	0/0:34,0:34:96.28:0,96,2918	0/0:23,0:23:66.21:0,66,2119	0/0:28,0:28:81.18:0,81,2511	0/0:26,0:26:75.24:0,75,2206	0/0:27,0:27:81.28:0,81,2671	0/0:27,0:27:81.26:0,81,2621	0/0:24,0:23:66.19:0,66,2121	0/0:22,0:22:66.21:0,66,2054	0/0:21,0:21:63.17:0,63,1957	0/0:26,0:26:78.23:0,78,2474	0/0:29,0:29:87.25:0,87,2531	0/0:30,0:30:87.26:0,87,2785	0/0:34,0:34:99:0,99,3136	0/0:41,0:41:99:0,119,3814	0/0:12,0:11:33.09:0,33,891	0/0:25,0:25:72.23:0,72,2332	1/1:1,7:17:18.06:881,18,0	0/0:14,0:14:42.14:0,42,1293	0/0:18,0:18:54.19:0,54,1753	0/0:18,0:18:54.19:0,54,1773	0/0:22,0:22:66.21:0,66,2224	0/0:19,0:19:57.17:0,57,1717	0/0:30,0:30:87.26:0,87,2725	0/0:9,0:9:27.07:0,27,837
chr10	8117693	.	A	AT	10066.40	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-15.043;DP=579;FS=6.738;HRun=7;HaplotypeScore=52.1233;InbreedingCoeff=0.9966;MQ=77.43;MQ0=0;MQRankSum=-3.085;QD=30.88;ReadPosRankSum=-0.392;VQSLOD=4.9084;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,141,1347	1/1:0,5:5:15.05:181,15,0	0/0:24,0:24:60:0,60,560	0/0:14,0:13:20.65:0,21,216	1/1:1,24:25:69.21:833,69,0	1/1:1,14:15:42.13:507,42,0	1/1:4,17:21:22.18:551,22,0	1/1:6,26:32:76.20:926,76,0	1/1:3,14:17:42.13:507,42,0	0/0:25,0:25:66.06:0,66,629	0/0:23,0:23:66.10:0,66,637	1/1:1,18:19:54.17:652,54,0	1/1:2,14:16:36.11:435,36,0	1/1:1,15:16:45.14:541,45,0	0/0:23,0:23:63.10:0,63,608	1/1:1,14:15:35.66:434,36,0	1/1:1,16:17:45.14:544,45,0	0/0:17,0:17:39.06:0,39,376	1/1:4,17:21:54.15:638,54,0	1/1:3,18:21:51.11:600,51,0	0/0:16,0:16:39.06:0,39,377	0/0:27,0:27:78.11:0,78,747	0/0:16,0:16:48.07:0,48,458	0/0:19,0:19:51.03:0,51,483	1/1:1,24:26:72.22:868,72,0	1/1:3,18:21:54.17:652,54,0	1/1:5,21:26:60.18:725,60,0	1/1:0,13:13:39.12:471,39,0
chr10	8118269	.	GAC	G	3712.22	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=7.836;DP=956;FS=73.464;HRun=0;HaplotypeScore=167.2366;InbreedingCoeff=0.8952;MQ=45.79;MQ0=37;MQRankSum=0.571;QD=9.42;ReadPosRankSum=0.550;VQSLOD=0.7471;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:72,2:70:3.28:0,3,1550	1/1:3,5:8:6.02:75,6,0	0/0:63,0:20:35.07:0,35,434	0/0:58,0:20:26.92:0,27,321	1/1:11,11:23:24.08:299,24,0	1/1:8,9:17:23.97:277,24,0	1/1:27,9:30:21.07:258,21,0	1/1:24,17:26:51.12:605,51,0	1/1:16,12:21:21.06:263,21,0	0/0:59,0:55:99:0,117,1889	0/0:24,0:23:63.17:0,63,961	1/1:25,12:33:9.01:107,9,0	1/1:6,25:29:24.08:300,24,0	1/1:8,7:13:6.49:76,6,0	0/0:49,0:49:75.17:0,75,1235	1/1:22,8:26:8.07:175,8,0	1/1:13,2:13:10.95:119,11,0	0/0:32,1:33:25.05:0,25,797	1/1:21,5:14:11.47:177,11,0	1/1:11,10:20:9.02:113,9,0	0/0:83,1:74:10.63:0,11,674	0/0:41,1:39:48.10:0,48,779	0/0:22,0:21:39.13:0,39,637	0/0:53,1:54:52.79:0,53,1383	1/1:6,6:11:18.06:224,18,0	1/1:20,5:22:20.67:277,21,0	1/1:15,6:20:18.06:220,18,0	1/1:5,2:7:12.04:148,12,0
chr10	8118317	.	G	GAC	3816.54	PASS	AB=0.877;AC=21;AF=0.420;AN=50;BaseQRankSum=-5.369;DP=871;FS=19.502;HRun=0;HaplotypeScore=118.6062;InbreedingCoeff=0.4092;MQ=35.55;MQ0=120;MQRankSum=4.468;QD=7.69;ReadPosRankSum=4.667;VQSLOD=1.4840;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:74,0:65:99:0,121,1496	0/0:8,0:7:0:0,0,0	0/0:20,1:1:3.01:0,3,38	0/0:18,0:2:3.01:0,3,38	./.	./.	0/1:24,0:14:0.02:0,0,0	0/0:57,0:8:21.05:0,21,227	0/1:15,0:9:0:1,0,0	0/1:31,12:34:2.47:755,0,2	1/1:13,9:20:41.42:561,41,0	0/0:26,0:22:2.95:0,3,34	0/0:20,0:16:14.30:0,14,102	./.	1/1:22,36:51:17.65:301,18,0	0/0:21,0:17:11.66:0,12,97	0/1:11,0:5:0.64:17,0,1	1/1:5,28:30:9.33:362,9,0	0/0:38,0:12:20.08:0,20,215	0/0:34,0:30:6.90:0,7,79	0/1:78,38:83:14.03:130,0,14	1/1:23,13:31:42.58:623,43,0	0/1:12,22:29:39.58:230,0,40	1/1:24,35:54:50.84:802,51,0	0/0:16,0:16:5.83:0,6,44	0/1:30,0:19:19.65:20,0,276	1/1:9,0:7:4.48:11,4,0	1/1:6,0:4:1.82:5,2,0
chr10	8118331	.	C	CAT	51.82	PASS	AB=0.977;AC=7;AF=0.135;AN=52;BaseQRankSum=4.458;DP=951;FS=8.159;HRun=0;HaplotypeScore=139.6768;InbreedingCoeff=0.0416;MQ=34.41;MQ0=147;MQRankSum=-2.692;QD=0.27;ReadPosRankSum=1.944;VQSLOD=1.8964;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:75,0:65:99:0,132,1905	0/0:9,0:8:2.88:0,3,15	./.	0/0:4,0:1:2.99:0,3,24	./.	0/0:10,1:8:3.01:0,3,36	0/1:29,0:17:0.04:0,0,0	0/0:74,0:15:42.06:0,42,530	0/0:16,0:10:3:0,3,28	0/1:50,1:39:29.31:29,0,524	0/0:25,0:22:36.53:0,37,431	0/0:29,0:25:6.02:0,6,82	0/0:21,1:16:6.11:0,6,155	0/0:21,0:15:3.01:0,3,45	0/0:54,1:46:29.59:0,30,274	0/0:21,2:18:11.61:0,12,118	1/1:16,0:8:2.24:44,2,0	0/0:36,0:32:27.27:0,27,222	0/0:42,0:10:23.86:0,24,261	0/1:37,0:30:9.66:10,0,82	0/0:126,0:89:20.90:0,21,236	0/0:39,0:33:48.23:0,48,456	0/0:32,2:29:29.90:0,30,322	0/0:68,1:60:86.70:0,87,874	0/1:18,1:19:10.58:11,0,46	0/1:38,2:24:67.11:67,0,483	0/0:15,0:12:1.76:0,2,139	0/0:7,0:4:2.80:0,3,13
chr10	8118351	.	CAT	C	520.16	PASS	AB=1.000;AC=24;AF=0.462;AN=52;BaseQRankSum=7.766;DP=969;FS=34.541;HRun=0;HaplotypeScore=139.1845;InbreedingCoeff=0.2812;MQ=34.37;MQ0=158;MQRankSum=-8.990;QD=1.14;ReadPosRankSum=-1.226;VQSLOD=1.0654;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:80,0:70:99:0,136,2069	1/1:9,0:7:2.94:18,3,0	./.	./.	1/1:22,2:19:2.22:7,2,0	1/1:12,0:8:5.88:37,6,0	0/1:34,0:22:0:0,0,0	0/1:83,0:20:9.54:171,0,10	0/0:18,1:14:0.55:0,1,3	0/1:47,0:36:21.52:22,0,866	0/0:26,0:23:30.68:0,31,680	1/1:25,0:20:4.22:35,4,0	0/1:20,0:14:43.54:44,0,44	1/1:22,0:15:2.90:16,3,0	0/0:54,0:44:41.99:0,42,646	1/1:26,0:20:8.75:51,9,0	1/1:21,1:12:5.33:31,5,0	0/0:40,0:36:24.03:0,24,742	0/1:35,0:6:18.56:19,0,28	0/1:33,0:26:10.06:10,0,68	0/0:124,0:85:25.65:0,26,448	0/0:38,0:33:34.64:0,35,874	0/0:32,0:28:23.95:0,24,506	0/0:70,0:60:93.20:0,93,1576	0/0:21,0:18:3.01:0,3,57	0/1:36,0:22:81.88:82,0,100	1/1:13,0:11:19.59:100,20,0	0/1:14,0:9:1.45:41,0,1
chr10	8118353	.	TAC	T	1155.29	PASS	AB=0.803;AC=24;AF=0.462;AN=52;BaseQRankSum=7.751;DP=964;FS=37.774;HRun=0;HaplotypeScore=137.1282;InbreedingCoeff=0.3949;MQ=34.42;MQ0=156;MQRankSum=-9.396;QD=2.63;ReadPosRankSum=0.791;VQSLOD=0.9520;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:76,0:67:99:0,117,1958	0/0:5,2:7:0:0,0,0	./.	./.	1/1:16,7:20:2.22:7,2,0	1/1:6,5:7:6.02:66,6,0	0/1:23,12:23:0.01:0,0,0	1/1:66,13:20:35.94:407,36,0	0/0:11,6:14:2.77:0,3,17	0/0:46,1:35:10.90:0,11,822	0/0:23,0:21:36.12:0,36,588	1/1:12,13:21:6.01:65,6,0	0/1:13,9:15:47.04:87,0,47	1/1:10,12:15:3.01:34,3,0	0/0:53,0:44:45.11:0,45,658	1/1:17,9:20:8.82:100,9,0	1/1:21,3:13:4.67:23,5,0	0/1:36,1:35:3.73:4,0,695	0/1:33,2:6:28.59:62,0,29	0/1:18,14:26:32.93:33,0,45	0/0:124,1:87:24.55:0,25,408	0/0:37,0:32:54.18:0,54,848	0/0:33,0:29:38.85:0,39,569	0/0:63,0:61:93.26:0,93,1496	0/0:11,10:18:3.01:0,3,51	0/1:26,8:20:42.18:197,0,42	1/1:7,6:11:15.38:173,15,0	1/1:11,3:9:5.90:66,6,0
chr10	8118361	.	CACAT	C	1716.06	PASS	AB=0.987;AC=21;AF=0.404;AN=52;BaseQRankSum=7.573;DP=1018;FS=38.257;HRun=0;HaplotypeScore=163.8424;InbreedingCoeff=0.3322;MQ=34.92;MQ0=150;MQRankSum=-9.774;QD=4.20;ReadPosRankSum=-1.421;VQSLOD=0.9963;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:76,0:69:99:0,130,2794	1/1:10,1:10:2.50:9,2,0	./.	./.	1/1:26,1:23:2.50:9,2,0	1/1:15,0:10:4.99:105,5,0	0/1:37,0:22:0.11:0,0,0	0/1:77,0:24:36.76:381,0,37	0/0:22,0:17:5.44:0,5,29	0/0:51,0:39:50.05:0,50,1429	0/0:25,0:22:41.98:0,42,822	1/1:29,0:24:9.01:134,9,0	0/1:25,0:16:36.94:163,0,37	1/1:22,0:17:3.01:55,3,0	0/0:56,0:47:54.15:0,54,1106	1/1:29,1:23:8.98:160,9,0	0/0:26,0:14:8.23:0,8,56	0/0:45,0:40:8.38:0,8,1015	0/1:35,0:10:17.51:124,0,18	0/1:36,0:31:5.87:6,0,86	0/0:129,0:93:22.16:0,22,640	0/0:36,0:31:54.52:0,55,1171	0/0:31,0:28:42.11:0,42,783	0/0:71,0:61:99:0,101,2280	0/0:28,1:24:2.99:0,3,80	0/1:35,1:22:99:268,0,139	1/1:15,0:14:21.74:308,22,0	0/1:13,1:9:6.56:158,0,7
chr10	8118365	.	TAC	T	1138.41	PASS	AB=0.832;AC=22;AF=0.423;AN=52;BaseQRankSum=8.056;DP=1026;FS=26.193;HRun=0;HaplotypeScore=148.8371;InbreedingCoeff=0.2042;MQ=35.00;MQ0=148;MQRankSum=-8.333;QD=2.43;ReadPosRankSum=-0.059;VQSLOD=0.9198;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:74,1:69:99:0,128,2027	0/0:10,1:10:0:0,0,0	./.	./.	1/1:14,11:21:2.22:7,2,0	1/1:10,6:10:6.02:71,6,0	0/0:30,10:22:0.47:0,0,1	0/1:65,12:23:99:210,0,130	0/0:15,7:17:5.35:0,5,48	0/0:47,0:36:68.03:0,68,1181	0/0:22,0:20:36.12:0,36,582	1/1:18,14:25:9.02:95,9,0	0/1:12,12:15:44.62:119,0,45	1/1:13,12:20:3.01:34,3,0	0/0:55,0:45:51.17:0,51,832	1/1:17,12:20:8.97:93,9,0	0/1:28,2:17:13.01:13,0,45	0/1:47,0:42:21.11:21,0,776	0/1:28,3:10:72.19:120,0,72	0/1:22,17:33:41.52:68,0,42	0/0:127,1:92:24.55:0,25,409	0/0:36,0:31:55.06:0,55,887	0/0:30,0:28:39.11:0,39,605	0/0:76,0:66:99:0,108,1668	0/1:21,10:25:16.35:16,0,60	0/1:26,7:20:99:124,0,147	1/1:8,7:14:18.81:208,19,0	1/1:11,3:9:5.18:104,5,0
chr10	8118411	.	GAC	G	61.66	PASS	AB=1.000;AC=8;AF=0.167;AN=48;BaseQRankSum=6.526;DP=1075;FS=14.933;HRun=0;HaplotypeScore=159.0955;InbreedingCoeff=-0.0062;MQ=34.39;MQ0=158;MQRankSum=-5.530;QD=0.26;ReadPosRankSum=0.385;VQSLOD=1.6746;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:77,1:69:99:0,134,2106	./.	./.	./.	0/1:33,0:29:8.59:9,0,138	0/0:23,0:10:3:0,3,50	0/1:53,0:25:17.07:17,0,77	./.	0/1:23,0:15:38.29:45,0,38	0/0:63,1:53:99:0,105,1532	0/0:27,0:24:33.11:0,33,543	0/0:30,0:23:4.26:0,4,53	0/0:28,0:19:9.31:0,9,137	1/1:26,1:19:3.89:29,4,0	0/0:58,1:47:37:0,37,1095	0/0:28,0:20:8.98:0,9,119	0/1:33,0:20:13.04:14,0,13	0/0:45,0:43:93.19:0,93,1417	0/0:41,0:15:30.08:0,30,419	0/0:31,0:28:20.97:0,21,292	0/0:82,3:61:2.09:0,2,36	0/0:43,0:36:67.04:0,67,1063	0/0:31,1:29:45.09:0,45,678	0/0:71,0:59:99:0,111,1773	0/0:39,0:30:12.04:0,12,198	0/1:43,0:29:4.74:5,0,277	0/1:25,0:22:64.62:65,0,219	0/0:14,0:8:13.86:0,14,205
chr10	8118423	.	CAT	C	317.79	PASS	AB=0.865;AC=10;AF=0.200;AN=50;BaseQRankSum=7.133;DP=1026;FS=25.312;HRun=0;HaplotypeScore=153.5385;InbreedingCoeff=-0.0187;MQ=34.17;MQ0=168;MQRankSum=-5.747;QD=1.20;ReadPosRankSum=-1.571;VQSLOD=1.0849;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:81,1:73:99:0,131,2278	0/1:8,4:10:0.03:0,0,0	./.	./.	0/1:30,3:28:13.93:14,0,160	0/0:17,5:11:3.73:0,4,58	0/1:50,2:22:35.77:36,0,66	./.	0/1:16,5:13:39.11:99,0,39	0/0:63,0:48:73.09:0,73,1734	0/0:25,0:22:33.08:0,33,528	0/0:27,4:22:4.10:0,4,60	0/1:22,6:18:21.92:22,0,101	1/1:14,9:16:5.97:63,6,0	0/0:66,0:52:55.13:0,55,1150	0/0:22,4:17:8.97:0,9,141	0/1:27,2:20:22.22:22,0,55	0/0:42,0:40:92.53:0,93,1594	0/0:42,0:15:32.83:0,33,431	0/0:31,2:29:20.98:0,21,330	0/0:70,0:43:0.64:0,1,33	0/0:42,0:35:68.79:0,69,1064	0/0:32,0:28:45.08:0,45,791	0/0:64,0:57:99:0,108,1767	0/0:26,10:28:13.57:0,14,222	0/1:37,3:23:52.49:52,0,281	0/1:20,7:24:99:141,0,172	0/0:15,0:10:11.92:0,12,221
chr10	8118425	.	TAC	T	93.20	PASS	AB=0.995;AC=9;AF=0.180;AN=50;BaseQRankSum=6.200;DP=1021;FS=14.873;HRun=0;HaplotypeScore=155.1521;InbreedingCoeff=0.0346;MQ=34.12;MQ0=168;MQRankSum=-6.050;QD=0.42;ReadPosRankSum=0.406;VQSLOD=2.1746;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:83,0:74:99:0,137,2083	0/1:12,0:10:0:0,0,0	./.	./.	0/0:33,0:28:2.22:0,2,129	0/0:22,0:11:3.90:0,4,54	0/1:48,0:18:21.09:21,0,41	./.	0/1:20,0:12:24.19:48,0,24	0/0:62,1:48:72.69:0,73,1672	0/0:25,0:22:30:0,30,408	0/0:29,0:20:3.01:0,3,52	0/1:27,1:18:30.93:31,0,68	1/1:22,0:15:3.47:27,3,0	0/0:65,0:51:68.51:0,69,1036	0/0:26,0:17:9.03:0,9,137	0/1:30,0:20:1.51:2,0,144	0/0:42,0:40:87.30:0,87,1433	0/0:41,0:14:29.82:0,30,341	0/0:34,0:30:20.86:0,21,296	0/0:68,2:44:2.96:0,3,21	0/0:43,0:36:57.18:0,57,941	0/0:34,0:30:45.15:0,45,748	0/0:61,1:56:87.17:0,87,1438	0/0:37,0:29:14.40:0,14,203	0/1:38,0:22:2.35:2,0,308	0/1:26,0:23:65.17:78,0,65	0/0:15,0:10:12.03:0,12,167
chr10	8118435	.	GAC	G	38.94	PASS	AB=1.000;AC=6;AF=0.120;AN=50;BaseQRankSum=4.648;DP=979;FS=8.003;HRun=0;HaplotypeScore=143.4006;InbreedingCoeff=0.0960;MQ=32.81;MQ0=174;MQRankSum=-5.016;QD=0.31;ReadPosRankSum=-1.421;VQSLOD=2.0893;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:82,1:73:99:0,110,1794	0/1:12,0:10:0:0,0,0	./.	./.	0/0:34,0:29:4.23:0,4,24	0/0:14,1:9:3.88:0,4,26	0/0:49,0:21:5.56:0,6,30	0/0:67,1:3:2.96:0,3,19	1/1:22,0:13:1.17:59,1,0	0/0:64,0:47:81.71:0,82,1464	0/0:20,0:17:20.97:0,21,292	0/0:22,2:16:2.99:0,3,24	0/1:26,0:17:8.92:16,0,9	0/0:20,0:13:4.88:0,5,20	0/0:63,1:49:59.94:0,60,942	0/0:25,1:17:9.17:0,9,73	0/1:32,0:21:22.33:22,0,179	0/0:37,0:35:77:0,77,1125	./.	0/0:41,0:35:7.86:0,8,82	0/0:71,2:46:2.97:0,3,20	0/0:39,0:31:48.16:0,48,811	0/0:32,0:28:39.13:0,39,640	0/0:47,0:41:75.21:0,75,1218	0/0:34,0:26:11.22:0,11,106	0/1:32,0:19:45.87:46,0,150	0/0:21,0:18:15.76:0,16,81	0/0:14,0:9:3.42:0,3,21
chr10	8118445	.	CAT	C	76.35	PASS	AB=0.968;AC=16;AF=0.308;AN=52;BaseQRankSum=5.752;DP=889;FS=7.213;HRun=0;HaplotypeScore=132.6015;InbreedingCoeff=0.2805;MQ=32.49;MQ0=171;MQRankSum=-4.984;QD=0.29;ReadPosRankSum=-2.731;VQSLOD=1.5051;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:77,0:69:99:0,119,1873	0/1:11,2:9:0:0,0,0	./.	./.	1/1:31,1:26:0.81:2,1,0	0/0:14,0:8:0.47:0,0,1	0/0:37,0:15:10.30:0,10,75	0/0:58,0:3:8.35:0,8,56	1/1:16,0:9:4.55:42,5,0	0/0:61,1:44:33.72:0,34,1419	0/0:18,0:16:10:0,10,272	1/1:21,0:15:0.47:1,0,0	1/1:23,0:17:5.89:67,6,0	0/1:18,0:12:0:0,0,0	0/0:59,0:46:54.30:0,54,883	0/0:23,0:15:1.46:0,1,22	0/1:28,0:19:5.58:6,0,206	0/0:34,0:31:52.50:0,52,1068	0/0:23,0:2:2.98:0,3,21	0/1:36,1:32:26.50:26,0,56	0/0:58,0:34:3.48:0,3,34	0/0:37,0:31:48.15:0,48,846	0/0:33,0:30:39.02:0,39,567	0/0:45,0:38:75.03:0,75,1234	0/1:29,0:23:13.43:13,0,50	0/1:31,1:21:25.87:26,0,187	0/0:23,0:20:3.39:0,3,47	1/1:13,0:9:2.96:19,3,0
chr10	8118457	.	G	GAC	2080.73	PASS	AB=0.920;AC=27;AF=0.540;AN=50;BaseQRankSum=1.848;DP=837;FS=0.000;HRun=0;HaplotypeScore=123.5001;InbreedingCoeff=-0.0045;MQ=30.81;MQ0=167;MQRankSum=-0.247;QD=3.32;ReadPosRankSum=1.493;VQSLOD=2.1327;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:71,0:65:87.98:0,88,1159	1/1:13,1:11:0.69:2,1,0	./.	./.	0/0:19,9:22:0:0,0,0	0/1:9,2:5:0:0,0,0	0/1:32,2:14:39.90:87,0,40	0/1:52,2:4:28.15:90,0,28	0/0:12,1:7:2.61:0,3,34	1/1:71,0:47:10.25:468,10,0	1/1:19,0:18:11.89:93,12,0	0/1:18,3:15:0:0,0,0	0/1:16,3:14:1.57:53,0,2	./.	0/1:51,1:39:2.74:160,0,3	0/1:16,1:10:29.69:30,0,30	0/0:21,0:14:12.01:0,12,130	0/1:29,0:25:61.25:141,0,61	1/1:18,0:5:5.94:42,6,0	1/1:23,12:30:8.93:106,9,0	0/1:48,2:29:0.01:0,0,0	0/1:38,0:34:64.05:190,0,64	1/1:31,0:27:18.04:186,18,0	0/1:41,0:34:14.94:202,0,15	0/0:24,2:21:2.55:0,3,37	0/1:26,9:22:99:208,0,101	0/1:20,6:22:37.19:113,0,37	1/1:5,2:4:5.38:46,5,0
chr10	8118467	.	C	CAT	341.07	PASS	AB=0.991;AC=16;AF=0.333;AN=48;BaseQRankSum=2.331;DP=771;FS=6.979;HRun=0;HaplotypeScore=124.9351;InbreedingCoeff=-0.2966;MQ=30.52;MQ0=163;MQRankSum=-2.063;QD=0.69;ReadPosRankSum=5.144;VQSLOD=1.6648;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:68,0:63:99:0,100,1557	0/0:17,0:14:2.92:0,3,17	./.	./.	0/0:22,0:18:0:0,0,0	./.	0/1:34,0:13:39.27:44,0,39	0/1:42,0:4:35.51:55,0,36	0/0:11,0:5:3.01:0,3,44	0/1:66,0:41:60.51:61,0,215	0/0:18,0:17:1.32:0,1,23	0/0:16,0:12:0:0,0,0	0/1:18,0:14:15.84:25,0,16	./.	0/1:45,0:36:10.93:11,0,89	0/1:12,0:7:10.62:11,0,40	0/0:19,0:13:13.77:0,14,70	0/1:24,0:20:7.18:7,0,133	0/0:21,0:7:14.02:0,14,87	1/1:31,0:25:8.75:55,9,0	0/1:45,4:32:0.30:0,0,1	0/1:42,0:37:17.05:17,0,165	0/1:30,0:28:19.94:21,0,20	0/1:37,0:29:7.05:7,0,196	0/0:16,0:15:3.48:0,3,47	0/1:34,0:22:98.25:98,0,125	0/1:21,0:17:44.23:44,0,82	0/1:6,0:4:6.97:14,0,7
chr10	8118469	.	C	CAT	3556.52	PASS	AB=0.967;AC=23;AF=0.479;AN=48;BaseQRankSum=-2.583;DP=748;FS=0.000;HRun=0;HaplotypeScore=111.3561;InbreedingCoeff=0.0531;MQ=30.89;MQ0=158;MQRankSum=2.130;QD=7.58;ReadPosRankSum=1.414;VQSLOD=3.3128;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:64,0:61:99:0,119,1475	0/0:16,0:13:2.92:0,3,17	./.	./.	0/0:20,0:16:0:0,0,0	0/0:10,0:6:0.89:0,1,2	0/1:31,0:13:5.21:47,0,5	0/1:41,0:4:32.51:53,0,33	0/0:11,0:5:2.89:0,3,19	0/1:48,15:39:13.79:863,0,14	1/1:10,9:18:15.04:216,15,0	./.	0/1:17,0:13:15.73:16,0,28	./.	1/1:26,20:36:14.65:359,15,0	0/1:10,0:7:11.66:12,0,37	0/1:18,0:13:4.18:4,0,44	1/1:17,7:19:1.67:329,2,0	0/0:23,0:8:0.93:0,1,66	1/1:32,0:26:5.70:38,6,0	0/0:47,0:30:2.67:0,3,20	1/1:29,13:37:27.08:449,27,0	1/1:13,17:28:30.05:427,30,0	1/1:27,10:29:44.96:555,45,0	0/0:14,0:14:3.01:0,3,35	0/1:31,1:23:99:126,0,128	0/1:17,0:14:23.46:48,0,23	0/1:7,0:4:6.01:14,0,6
chr10	8118499	.	CAG	C	622.91	PASS	AB=0.987;AC=21;AF=0.438;AN=48;BaseQRankSum=3.685;DP=770;FS=1.940;HRun=0;HaplotypeScore=123.3229;InbreedingCoeff=-0.0625;MQ=29.86;MQ0=132;MQRankSum=-0.062;QD=1.51;ReadPosRankSum=0.138;VQSLOD=2.5703;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:65,0:62:70.43:0,70,1844	0/1:18,0:14:8.55:9,0,36	./.	./.	1/1:19,0:17:2.90:22,3,0	1/1:14,0:9:2.99:24,3,0	0/0:41,0:20:11.10:0,11,81	0/0:54,0:7:9.30:0,9,62	./.	0/1:59,0:36:99:198,0,120	1/1:17,0:16:8.39:40,8,0	0/0:20,0:12:2.02:0,2,6	0/1:14,0:10:13.72:14,0,23	./.	0/1:41,1:29:32.36:40,0,32	0/1:14,0:7:5.60:6,0,30	0/0:19,0:13:9.06:0,9,50	0/1:25,1:18:16.19:127,0,16	0/0:34,0:7:13.57:0,14,144	0/1:37,0:31:21.65:22,0,30	0/0:47,1:30:1.85:0,2,16	0/1:42,1:38:17.06:17,0,45	1/1:29,0:26:16.53:79,17,0	0/1:35,0:30:16:141,0,16	1/1:19,0:17:2.38:13,2,0	0/0:36,0:22:15.69:0,16,256	0/1:15,1:15:3.74:4,0,91	0/1:8,0:5:16.36:16,0,33
chr10	8118501	.	GAC	G	1645.19	PASS	AB=0.891;AC=18;AF=0.360;AN=50;BaseQRankSum=-0.576;DP=767;FS=0.000;HRun=0;HaplotypeScore=123.6655;InbreedingCoeff=0.3438;MQ=29.88;MQ0=129;MQRankSum=0.960;QD=4.25;ReadPosRankSum=0.117;VQSLOD=2.8317;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:64,1:62:92.19:0,92,1595	0/0:11,0:14:3.41:0,3,19	./.	./.	0/0:17,0:17:0.88:0,1,2	0/0:13,0:10:1.90:0,2,6	0/0:37,1:20:0.49:0,0,2	0/0:49,0:7:11.77:0,12,74	./.	0/1:37,22:36:21.26:540,0,21	1/1:2,14:16:9.03:115,9,0	0/0:17,0:12:2.02:0,2,6	0/0:15,0:11:1.98:0,2,40	0/0:12,0:10:2.04:0,2,6	1/1:30,11:29:9.15:136,9,0	0/0:12,0:8:3.41:0,3,19	0/1:15,3:13:0:0,0,0	1/1:17,8:17:2.34:174,2,0	0/0:34,0:8:2.58:0,3,49	0/1:24,0:30:2.99:3,0,16	1/1:43,2:29:0.36:1,0,0	1/1:13,29:37:6.02:76,6,0	1/1:14,16:27:23.53:244,24,0	1/1:22,12:30:39.12:483,39,0	0/0:9,1:16:2.74:0,3,12	0/1:26,1:21:12.17:12,0,197	0/0:14,0:16:8.49:0,8,61	0/0:9,0:7:1.06:0,1,24
chr10	8118513	.	CAT	C	1097.27	PASS	AB=0.994;AC=30;AF=0.577;AN=52;BaseQRankSum=2.733;DP=737;FS=10.054;HRun=0;HaplotypeScore=125.3817;InbreedingCoeff=-0.0808;MQ=30.87;MQ0=129;MQRankSum=-0.696;QD=1.79;ReadPosRankSum=1.905;VQSLOD=1.9877;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:61,0:59:81.73:0,82,1735	1/1:19,0:14:2.86:17,3,0	./.	./.	1/1:20,0:17:2.90:22,3,0	0/0:16,1:13:9.86:0,10,44	1/1:42,1:20:3.11:23,3,0	0/1:62,0:13:49.09:49,0,84	1/1:13,0:6:0.47:1,0,0	0/1:50,1:33:29.80:299,0,30	0/1:20,0:19:7.20:54,0,7	0/0:17,0:12:3.89:0,4,12	0/1:13,0:8:3.93:4,0,15	0/0:13,0:10:2.04:0,2,6	0/1:38,1:27:12.46:103,0,12	1/1:15,0:8:2.55:11,3,0	0/0:12,0:7:5.86:0,6,36	0/1:26,0:18:45.47:92,0,45	0/1:30,0:4:28.84:29,0,47	0/1:39,0:33:2.16:35,0,2	1/1:40,2:24:0.47:2,0,0	0/1:41,1:38:37.28:38,0,37	1/1:29,1:27:20.53:160,21,0	1/1:35,0:30:31.21:215,31,0	1/1:19,0:17:0.10:10,0,0	0/1:36,0:23:40.62:41,0,178	0/1:11,0:9:0.39:0,0,32	0/1:8,0:7:19.93:36,0,20
chr10	8118527	.	G	GAC	927.37	PASS	AB=0.954;AC=23;AF=0.460;AN=50;BaseQRankSum=4.142;DP=740;FS=42.797;HRun=0;HaplotypeScore=129.4218;InbreedingCoeff=0.3633;MQ=32.29;MQ0=120;MQRankSum=-6.536;QD=2.78;ReadPosRankSum=-2.905;VQSLOD=0.1418;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:61,0:61:99:0,111,1287	1/1:15,5:15:2.88:23,3,0	0/1:9,0:2:0:0,0,0	./.	1/1:16,2:15:0.47:2,0,0	0/0:9,7:13:1.24:0,1,3	0/0:38,2:19:0.63:0,1,3	0/1:57,0:17:42.71:201,0,43	1/1:10,2:7:5.23:54,5,0	0/0:50,0:34:62.57:0,63,632	0/0:21,0:20:26.49:0,26,284	./.	0/1:11,0:7:6.71:13,0,7	1/1:10,3:11:3.01:46,3,0	0/0:34,0:24:32.36:0,32,398	./.	0/1:10,0:7:11.48:31,0,11	0/0:31,0:22:23:0,23,339	1/1:36,0:9:19.36:189,19,0	0/1:22,9:25:31.46:43,0,31	0/1:36,0:19:0.11:0,0,0	0/0:42,0:39:29.39:0,29,314	0/0:28,0:24:32.81:0,33,355	0/0:37,0:33:54.16:0,54,654	1/1:19,4:21:4.17:52,4,0	0/1:32,4:25:35.96:189,0,36	1/1:9,4:11:14.63:160,15,0	1/1:2,4:5:6.10:78,6,0
chr10	8118539	.	CAG	C	454.41	PASS	AB=0.988;AC=18;AF=0.333;AN=54;BaseQRankSum=3.954;DP=748;FS=2.682;HRun=0;HaplotypeScore=131.8545;InbreedingCoeff=0.0125;MQ=34.70;MQ0=105;MQRankSum=-5.314;QD=1.28;ReadPosRankSum=-3.653;VQSLOD=1.6390;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:62,0:60:58.29:0,58,1700	0/1:20,0:15:9.14:13,0,9	0/1:22,0:5:13.39:18,0,13	0/1:27,0:6:36.02:36,0,50	1/1:18,0:15:5.96:46,6,0	0/0:18,0:14:11.02:0,11,58	1/1:36,0:19:0.92:16,1,0	0/1:47,2:16:81.76:196,0,82	0/1:11,0:8:0:0,0,0	0/0:55,0:41:57.68:0,58,1117	0/0:21,0:20:16.89:0,17,405	0/0:16,0:11:4.07:0,4,12	0/1:9,0:5:11.55:12,0,13	0/0:15,0:12:5.04:0,5,33	0/0:36,0:28:44.94:0,45,691	./.	0/1:10,0:8:10.52:12,0,11	0/1:31,0:22:26.81:27,0,559	0/1:35,1:11:31.98:78,0,32	0/0:27,1:23:12.12:0,12,106	0/1:31,2:18:0.01:0,0,0	0/0:44,0:39:38.87:0,39,591	0/0:24,0:20:11.31:0,11,504	0/0:40,0:36:36:0,36,922	0/0:23,0:21:3.85:0,4,33	0/1:34,0:23:66.33:66,0,80	1/1:11,0:9:9.24:53,9,0	0/1:7,0:6:24.70:33,0,25
chr10	8118541	.	G	GAC	704.74	PASS	AB=0.963;AC=24;AF=0.462;AN=52;BaseQRankSum=5.946;DP=730;FS=18.318;HRun=0;HaplotypeScore=135.4048;InbreedingCoeff=0.3870;MQ=35.05;MQ0=99;MQRankSum=-5.520;QD=2.09;ReadPosRankSum=-2.448;VQSLOD=0.7561;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:59,0:57:98.64:0,99,1098	0/1:17,2:14:4.08:18,0,4	0/0:25,0:7:8.61:0,9,73	0/1:27,0:6:2.56:3,0,101	1/1:17,0:14:2.46:13,2,0	1/1:13,5:14:3.01:46,3,0	1/1:33,3:19:3.37:79,3,0	0/1:47,0:16:28.47:84,0,28	1/1:6,5:7:3.01:44,3,0	0/0:54,0:42:81.85:0,82,865	0/0:20,0:19:27.08:0,27,322	./.	0/1:8,1:5:24.63:25,0,29	0/0:11,4:12:1.25:0,1,3	0/0:35,0:27:41.64:0,42,490	./.	1/1:10,1:9:1.47:18,1,0	0/0:30,0:22:37:0,37,421	1/1:32,2:11:11.23:132,11,0	0/0:21,4:22:2.47:0,2,20	0/1:32,0:17:0.11:0,0,0	0/0:43,0:38:33.09:0,33,393	0/0:24,0:20:35.92:0,36,402	0/0:38,0:36:50.90:0,51,571	1/1:18,5:21:2.05:5,2,0	0/1:32,1:23:36.39:122,0,36	1/1:7,5:10:14.98:199,15,0	1/1:5,2:6:7.38:77,7,0
chr10	8118603	.	A	AAACTGAG	14225.99	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=5.003;DP=495;FS=147.060;HRun=0;HaplotypeScore=125.4367;InbreedingCoeff=0.9447;MQ=87.21;MQ0=0;MQRankSum=-13.411;QD=71.85;ReadPosRankSum=-1.211;VQSLOD=1.4641;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,114,2756	1/1:3,2:7:9.03:303,9,0	0/0:25,0:23:57.16:0,57,1271	0/0:26,0:26:69.03:0,69,1379	1/1:0,15:16:27.09:1067,27,0	1/1:3,10:14:30.06:1095,30,0	1/1:1,9:12:18.06:716,18,0	1/1:2,10:20:54.11:1484,54,0	1/1:1,7:11:18.06:661,18,0	0/0:33,0:33:84.26:0,84,1980	0/0:17,0:17:51.15:0,51,1220	1/1:0,8:9:15.05:596,15,0	1/1:0,4:4:12.04:478,12,0	1/1:1,4:5:9.03:301,9,0	0/0:25,0:25:63.22:0,63,1588	1/1:1,3:4:3.01:119,3,0	1/1:4,2:6:12.02:382,12,0	0/0:27,0:27:66.20:0,66,1641	1/1:5,8:15:36.11:1003,36,0	1/1:9,10:19:42.10:1319,42,0	0/0:19,0:19:52.02:0,52,1230	0/0:30,0:30:69.23:0,69,1715	0/0:20,0:20:54.18:0,54,1335	0/0:32,0:32:90.27:0,90,2193	1/1:6,13:18:45.15:1620,45,0	1/1:5,8:13:36.12:1215,36,0	1/1:2,8:13:30.10:1083,30,0	1/1:1,7:9:21.07:783,21,0
chr10	8118606	.	C	CT	977.76	PASS	AB=0.951;AC=26;AF=0.464;AN=56;BaseQRankSum=14.663;DP=490;FS=111.451;HRun=0;HaplotypeScore=119.0240;InbreedingCoeff=0.3605;MQ=88.08;MQ0=0;MQRankSum=-13.807;QD=5.07;ReadPosRankSum=4.286;VQSLOD=0.0871;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,120,1603	1/1:4,1:5:7.45:60,7,0	0/0:25,0:23:61.71:0,62,778	0/0:25,0:25:71.44:0,71,919	0/1:17,0:17:17.35:78,0,17	0/1:12,0:12:17.18:43,0,17	1/1:13,0:12:4.98:33,5,0	0/1:19,0:19:41.43:41,0,331	1/1:10,1:11:14.89:101,15,0	0/0:32,0:32:93.30:0,93,1267	0/0:19,0:19:51.16:0,51,695	1/1:9,0:9:11.10:36,11,0	1/1:4,0:4:8.88:29,9,0	1/1:5,1:6:7.45:59,7,0	0/0:27,0:27:66.21:0,66,906	1/1:3,0:3:2.22:7,2,0	0/1:5,0:5:4.04:4,0,67	0/0:27,0:27:66.20:0,66,903	0/1:10,1:11:37.29:37,0,126	0/1:21,1:20:99:100,0,188	0/0:19,0:19:54.18:0,54,750	0/0:28,0:28:75.25:0,75,1046	0/0:21,0:21:57.16:0,57,774	0/0:32,0:32:90.27:0,90,1236	0/1:17,3:19:31.11:232,0,31	0/1:11,2:13:72.22:72,0,83	1/1:12,2:14:23.78:150,24,0	1/1:8,1:9:16.33:89,16,0
chr10	8119450	.	C	CTTCCCTTTGAAAC	19398.64	PASS	AB=0.800;AC=55;AF=0.982;AN=56;BaseQRankSum=0.455;DP=246;FS=9.491;HRun=0;HaplotypeScore=285.3480;InbreedingCoeff=-0.0389;MQ=69.43;MQ0=0;MQRankSum=-2.204;QD=78.86;ReadPosRankSum=1.221;VQSLOD=3.3672;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:12:18.05:709,18,0	1/1:2,0:2:3.01:151,3,0	1/1:6,0:8:18.06:758,18,0	0/1:6,1:7:0.25:528,0,0	1/1:11,0:12:30.10:1410,30,0	1/1:9,0:9:20.93:554,21,0	1/1:7,0:7:20.28:867,20,0	1/1:20,0:20:51.17:1844,51,0	1/1:14,0:14:23.91:949,24,0	1/1:8,0:8:15.04:551,15,0	1/1:7,0:7:8.96:321,9,0	1/1:6,0:6:11.85:355,12,0	1/1:10,0:10:20.97:733,21,0	1/1:12,0:13:30.05:1134,30,0	1/1:11,0:11:26.91:894,27,0	1/1:9,0:9:14.54:649,15,0	1/1:5,0:5:3.01:164,3,0	1/1:6,0:6:15.05:723,15,0	1/1:5,0:6:12.04:579,12,0	1/1:9,0:9:18.06:683,18,0	1/1:5,0:5:12.04:452,12,0	1/1:5,0:6:9.03:394,9,0	1/1:7,0:7:8.98:238,9,0	1/1:7,0:7:21.07:809,21,0	1/1:13,0:13:27.09:1304,27,0	1/1:13,0:13:21.07:607,21,0	1/1:11,0:11:21.07:993,21,0	1/1:2,0:2:5.99:48,6,0
chr10	8119451	.	T	TTCCCTTTGAAA	1571.73	PASS	AB=0.714;AC=33;AF=0.971;AN=34;BaseQRankSum=-2.361;DP=38;FS=0.000;HRun=0;HaplotypeScore=14.4053;InbreedingCoeff=-0.1832;MQ=128.47;MQ0=0;MQRankSum=-1.435;QD=44.91;ReadPosRankSum=-1.805;VQSLOD=2.5297;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,0:3:3:25,3,0	./.	1/1:2,1:5:12.04:432,12,0	0/1:3,1:4:8.76:212,0,9	1/1:1,0:1:3.01:106,3,0	1/1:2,0:2:5.96:45,6,0	./.	1/1:3,0:3:6.02:107,6,0	./.	1/1:1,0:1:3:26,3,0	./.	./.	1/1:1,0:1:2.97:20,3,0	1/1:1,0:1:3.01:106,3,0	1/1:1,0:1:2.97:20,3,0	./.	./.	./.	1/1:2,0:2:3.01:125,3,0	1/1:2,0:2:6.02:103,6,0	1/1:2,0:2:3.01:60,3,0	1/1:1,0:1:3.01:119,3,0	./.	1/1:1,0:1:3.01:49,3,0	./.	1/1:2,0:2:3.01:49,3,0	./.	1/1:2,0:2:5.99:48,6,0
chr10	8121078	.	A	AATAT	20277.88	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-14.722;DP=602;FS=22.468;HRun=0;HaplotypeScore=89.3785;InbreedingCoeff=0.9856;MQ=68.22;MQ0=0;MQRankSum=-4.117;QD=53.50;ReadPosRankSum=-0.723;VQSLOD=3.7108;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:90.27:0,90,1562	1/1:0,9:9:24.08:595,24,0	0/0:17,0:16:39.09:0,39,643	0/0:11,0:11:7.38:0,7,203	1/1:2,39:45:99:2552,99,0	1/1:3,25:29:57.20:1461,57,0	1/1:0,11:14:30.10:772,30,0	1/1:8,32:48:99:2476,120,0	1/1:1,21:23:51.18:1290,51,0	0/0:23,0:23:66.22:0,66,1148	0/0:27,0:27:72.25:0,72,1277	1/1:0,10:10:21.07:521,21,0	1/1:3,14:17:30.10:749,30,0	1/1:3,14:19:45.15:1112,45,0	0/0:18,0:18:51.15:0,51,852	1/1:1,12:15:27.09:697,27,0	1/1:0,14:14:36.12:927,36,0	0/0:20,0:20:51.15:0,51,852	1/1:3,14:18:42.14:1034,42,0	1/1:4,16:22:27.09:697,27,0	0/0:10,0:10:24.08:0,24,427	0/0:21,0:21:51.17:0,51,897	0/0:22,0:22:48.14:0,48,776	0/0:14,0:14:42.10:0,42,708	1/1:4,19:26:54.19:1393,54,0	1/1:4,30:36:42.91:2257,43,0	1/1:1,20:21:51.18:1291,51,0	1/1:2,7:12:18.06:454,18,0
chr10	8121852	.	G	GT	201.56	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=3.127;DP=634;FS=0.000;HRun=7;HaplotypeScore=61.9959;InbreedingCoeff=0.6220;MQ=86.66;MQ0=0;MQRankSum=0.981;QD=6.95;ReadPosRankSum=-1.036;VQSLOD=-0.1220;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,132,1249	0/0:7,0:7:18.03:0,18,174	0/0:23,0:24:38.21:0,38,340	0/1:20,0:21:15.26:15,0,210	0/0:28,0:28:78.09:0,78,745	0/0:22,0:21:66.06:0,66,623	0/0:28,0:28:69.05:0,69,648	0/0:29,0:29:65.91:0,66,606	0/0:21,0:21:63.10:0,63,608	0/0:29,0:29:81.11:0,81,776	0/0:20,0:20:48.07:0,48,463	0/0:21,0:21:60.10:0,60,579	0/0:27,0:27:72.03:0,72,666	0/0:11,0:11:24.04:0,24,232	0/0:18,0:18:51.05:0,51,482	0/0:24,0:24:69.11:0,69,666	0/0:29,0:29:81.12:0,81,777	0/0:21,0:21:57.09:0,57,550	0/0:22,0:22:60.09:0,60,579	0/0:19,0:19:51.08:0,51,492	1/1:0,8:8:24.07:290,24,0	0/0:27,0:27:78.13:0,78,753	0/0:32,0:32:90.14:0,90,868	0/0:23,0:23:57.08:0,57,550	0/0:28,0:28:78.10:0,78,746	0/0:14,0:14:36.06:0,36,348	0/0:30,0:30:86.97:0,87,807	0/0:4,0:4:9.01:0,9,87
chr10	8122677	.	C	CATA	8844	PASS	AB=0.926;AC=15;AF=0.268;AN=56;BaseQRankSum=-16.085;DP=695;FS=5.477;HRun=0;HaplotypeScore=112.9744;InbreedingCoeff=0.9075;MQ=93.09;MQ0=0;MQRankSum=-3.299;QD=47.81;ReadPosRankSum=2.028;VQSLOD=7.2145;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,105,1711	0/0:11,0:11:30.10:0,30,474	0/0:24,0:24:69.14:0,69,1038	0/0:40,0:40:93.29:0,93,1471	0/0:28,0:28:81.28:0,81,1323	0/0:17,0:17:48.15:0,48,760	0/0:35,0:35:96.33:0,96,1568	0/0:32,0:32:90.29:0,90,1423	0/0:32,0:32:93.30:0,93,1495	1/1:3,17:20:54.19:1205,54,0	1/1:2,23:26:63.21:1373,63,0	0/0:24,0:24:69.21:0,69,1079	0/0:23,0:23:63.22:0,63,1029	0/0:24,0:24:66.20:0,66,1030	1/1:3,19:23:54.19:1206,54,0	0/0:22,0:22:57.19:0,57,931	0/0:27,0:27:75.26:0,75,1225	1/1:1,22:23:54.19:1206,54,0	0/0:13,0:13:39.13:0,39,626	0/0:29,0:29:84.27:0,84,1348	0/0:34,0:34:99:0,99,1566	1/1:3,25:28:72.25:1607,72,0	1/1:1,16:17:42.14:909,42,0	1/1:0,23:23:57.20:1273,57,0	0/0:20,0:20:57.19:0,57,931	0/1:23,2:25:64.88:65,0,951	0/0:31,0:31:87.30:0,87,1420	0/0:7,0:7:18.06:0,18,294
chr10	8122939	.	T	TACAGACAA	27419.25	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-12.598;DP=778;FS=7.046;HRun=0;HaplotypeScore=172.0839;InbreedingCoeff=0.9864;MQ=70.25;MQ0=3;MQRankSum=-16.189;QD=59.35;ReadPosRankSum=0.418;VQSLOD=4.4580;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,135,3336	1/1:1,6:7:9.03:371,9,0	0/0:49,0:45:45.31:0,45,1711	0/0:46,0:44:71.95:0,72,1645	1/1:8,16:26:38.98:1263,39,0	1/1:11,22:33:54.19:2255,54,0	1/1:15,11:26:24.08:985,24,0	1/1:14,19:39:75.18:2176,75,0	1/1:8,21:33:54.17:2244,54,0	0/0:23,0:23:48.15:0,48,1134	0/0:30,0:30:66.22:0,66,1667	1/1:7,18:26:45.15:1881,45,0	1/1:5,19:25:48.16:1998,48,0	1/1:8,23:34:51.18:2090,51,0	0/0:26,0:26:66.20:0,66,1630	1/1:6,11:18:18.06:762,18,0	1/1:17,16:35:36.08:1415,36,0	0/0:14,0:14:35.85:0,36,771	1/1:6,15:23:51.17:1829,51,0	1/1:7,17:26:30.03:1025,30,0	1/1:7,13:23:15.48:517,15,0	0/0:23,0:23:45.15:0,45,1118	0/0:21,0:21:54.19:0,54,1401	0/0:29,0:29:75.18:0,75,1787	1/1:5,10:16:21.07:886,21,0	1/1:11,25:36:66.65:2523,67,0	1/1:5,21:26:57.20:2319,57,0	1/1:0,7:7:21.07:881,21,0
chr10	8123514	.	A	AC	3045.64	PASS	AB=1.000;AC=27;AF=0.482;AN=56;BaseQRankSum=-2.513;DP=624;FS=77.924;HRun=0;HaplotypeScore=107.0886;InbreedingCoeff=0.5849;MQ=56.17;MQ0=17;MQRankSum=-2.980;QD=8.56;ReadPosRankSum=7.144;VQSLOD=0.5760;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:59.56:0,60,473	1/1:13,0:13:3.94:118,4,0	0/0:66,0:12:11.15:0,11,100	0/0:74,0:29:43.46:0,43,323	1/1:43,0:43:10.64:245,11,0	0/1:14,0:14:5.75:91,0,6	1/1:9,0:9:16.20:116,16,0	1/1:41,0:41:33.95:290,34,0	1/1:19,0:19:7.49:154,7,0	0/0:16,0:16:48:0,48,432	0/0:10,0:10:27.68:0,28,213	1/1:17,1:18:17.64:212,18,0	1/1:14,0:13:38.05:234,38,0	0/0:1,11:11:2.92:0,3,17	0/0:11,0:11:23.88:0,24,192	1/1:25,2:27:20.19:342,20,0	1/1:16,0:16:16.51:137,17,0	0/0:19,0:19:50.80:0,51,405	0/1:26,0:24:19.95:193,0,20	0/1:19,0:19:19.71:170,0,20	0/0:5,0:5:7.54:0,8,37	0/0:9,0:9:23.99:0,24,212	0/0:9,0:9:23.97:0,24,207	0/0:16,0:16:36.82:0,37,302	1/1:24,0:24:27.86:249,28,0	0/1:30,0:30:35.72:264,0,36	1/1:34,0:34:8.60:349,9,0	0/1:9,0:9:4.93:87,0,5
chr10	8123535	.	TTCTCTCTCTCTCTCTC	T	541.66	PASS	AB=1.000;AC=7;AF=0.159;AN=44;BaseQRankSum=0.125;DP=434;FS=5.993;HRun=0;HaplotypeScore=147.8282;InbreedingCoeff=0.4802;MQ=46.97;MQ0=23;MQRankSum=0.225;QD=4.55;ReadPosRankSum=-0.776;VQSLOD=2.3093;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:15:21.51:0,22,501	0/0:8,0:8:15.01:0,15,429	0/0:72,0:13:5.99:0,6,97	0/1:68,0:19:4.61:5,0,135	1/1:28,0:28:0.47:1,0,0	./.	0/0:12,0:11:3.48:0,3,200	0/0:33,0:33:25.90:0,26,739	0/0:14,0:13:0.47:0,0,1	1/1:7,6:12:15.05:404,15,0	./.	0/0:7,0:7:9.03:0,9,359	0/0:10,0:9:9.03:0,9,483	0/0:5,0:5:6.02:0,6,203	1/1:4,5:10:6.02:237,6,0	0/0:9,0:9:13.29:0,13,488	0/0:8,0:9:9.03:0,9,360	./.	0/0:19,0:20:30.05:0,30,1137	0/0:7,0:8:3.44:0,3,20	./.	0/0:7,4:11:0.47:0,0,1	./.	0/0:4,0:4:0:0,0,0	0/0:15,0:15:3.48:0,3,83	0/0:14,0:15:27.09:0,27,858	0/0:11,0:10:15.05:0,15,550	./.
chr10	8123542	.	T	TCTCTCTCTCC	3588.08	PASS	AB=0.925;AC=28;AF=0.560;AN=50;BaseQRankSum=0.761;DP=453;FS=37.982;HRun=0;HaplotypeScore=142.2700;InbreedingCoeff=0.4161;MQ=44.71;MQ0=31;MQRankSum=-1.777;QD=15.27;ReadPosRankSum=1.904;VQSLOD=0.7857;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:17:17.50:0,18,239	1/1:9,0:9:20.73:260,21,0	0/0:71,0:13:9.51:0,10,78	0/0:82,0:19:10.97:0,11,94	0/1:5,22:29:0:0,0,0	1/1:9,0:9:23.73:158,24,0	0/1:16,0:15:11.26:122,0,11	1/1:30,0:30:58.96:466,59,0	1/1:15,0:14:0.92:197,1,0	0/0:11,0:10:14.95:0,15,122	0/0:2,0:2:3:0,3,26	1/1:9,0:9:0.36:211,0,0	1/1:11,0:9:15.15:350,15,0	1/1:7,0:6:6.22:69,6,0	0/0:9,0:9:6.02:0,6,131	1/1:10,1:11:13.55:369,14,0	0/1:11,0:10:2.05:142,0,2	./.	1/1:22,0:22:15.47:546,15,0	0/1:9,0:9:15.97:30,0,16	./.	0/0:9,0:9:11.68:0,12,100	0/0:6,0:5:5.99:0,6,50	./.	1/1:16,0:16:8.93:128,9,0	1/1:15,0:15:10.26:348,10,0	0/1:13,0:12:21.95:177,0,22	0/1:3,0:2:9.84:14,0,10
chr10	8123544	.	T	TCTCTCTCC	2880.56	PASS	AB=1.000;AC=28;AF=0.538;AN=52;BaseQRankSum=1.258;DP=455;FS=41.196;HRun=0;HaplotypeScore=130.5858;InbreedingCoeff=0.2769;MQ=41.42;MQ0=34;MQRankSum=-1.868;QD=11.71;ReadPosRankSum=2.286;VQSLOD=0.8558;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:15:16.96:0,17,212	1/1:9,0:9:20.73:222,21,0	0/0:69,0:12:9.15:0,9,77	0/0:84,0:20:11.08:0,11,94	0/1:29,0:29:0:0,0,0	1/1:9,0:9:23.73:158,24,0	0/1:16,0:15:30.91:109,0,31	1/1:27,0:27:36.14:441,36,0	1/1:15,0:14:0.91:159,1,0	0/0:11,0:10:14.95:0,15,122	0/1:4,0:4:17.33:18,0,17	1/1:9,0:9:0.43:176,0,0	1/1:12,0:10:15.30:283,15,0	0/1:7,0:6:0.05:10,0,0	0/0:9,0:9:6.02:0,6,105	1/1:5,5:12:13.55:292,14,0	0/1:12,0:11:0.07:131,0,0	./.	1/1:20,0:20:14.51:464,15,0	0/1:9,0:9:15.30:30,0,15	./.	0/0:9,0:9:11.82:0,12,101	0/0:5,0:4:5.99:0,6,50	0/1:7,0:7:0.17:0,0,0	1/1:16,0:16:8.93:128,9,0	0/1:15,0:14:15.48:297,0,15	0/1:15,0:14:42.90:111,0,43	0/1:3,0:2:10.49:14,0,10
chr10	8124418	.	G	GCACACA	4675.82	PASS	AB=0.769;AC=46;AF=0.885;AN=52;BaseQRankSum=-3.487;DP=604;FS=6.763;HRun=0;HaplotypeScore=164.6708;InbreedingCoeff=0.1274;MQ=55.71;MQ0=7;MQRankSum=-3.018;QD=9.13;ReadPosRankSum=-1.082;VQSLOD=3.4319;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:31:15.52:0,16,217	1/1:10,1:11:3.26:75,3,0	./.	./.	0/1:10,0:21:8.91:48,0,9	1/1:5,9:17:15.02:363,15,0	1/1:13,11:30:23.94:371,24,0	1/1:33,0:33:32.63:243,33,0	1/1:11,6:21:8.56:247,9,0	1/1:26,1:27:23.22:297,23,0	1/1:11,1:19:6:91,6,0	1/1:19,3:21:24.06:451,24,0	1/1:8,7:17:9.03:232,9,0	1/1:7,7:16:8.24:163,8,0	1/1:25,0:28:18.02:269,18,0	0/1:9,0:19:36.52:89,0,37	1/1:20,0:20:20.97:270,21,0	0/1:17,0:17:8.45:16,0,8	1/1:15,1:16:9.47:169,9,0	1/1:18,2:23:8.18:158,8,0	0/1:18,0:25:4.11:9,0,4	1/1:22,0:23:3.11:88,3,0	1/1:8,1:23:2.17:67,2,0	1/1:27,0:28:23.21:301,23,0	1/1:15,1:16:11.74:194,12,0	1/1:22,1:21:28.08:296,28,0	1/1:6,2:9:3.14:72,3,0	1/1:5,2:7:3.90:99,4,0
chr10	8124459	.	GGT	G	704.77	PASS	AB=0.957;AC=19;AF=0.339;AN=56;BaseQRankSum=4.513;DP=529;FS=38.757;HRun=0;HaplotypeScore=134.8851;InbreedingCoeff=-0.3922;MQ=50.76;MQ0=17;MQRankSum=-2.830;QD=2.37;ReadPosRankSum=-1.438;VQSLOD=0.6721;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:27:20.08:0,20,175	0/1:11,0:11:2.48:2,0,171	0/0:38,0:5:14.94:0,15,191	0/0:35,0:7:15.92:0,16,156	0/1:21,1:22:76.65:77,0,409	0/1:19,0:18:34.30:34,0,146	0/0:23,1:23:12.87:0,13,377	0/0:24,0:24:60.12:0,60,1010	0/1:20,0:20:43.09:43,0,80	0/1:23,1:24:99:117,0,419	1/1:15,1:16:11.06:78,11,0	0/1:17,0:14:32.42:32,0,126	0/1:10,0:10:10.22:10,0,126	0/1:16,2:16:76.12:80,0,76	0/1:24,1:25:56.37:56,0,199	0/0:17,0:17:33.06:0,33,570	0/0:13,1:14:9.07:0,9,295	0/1:11,2:13:30.30:30,0,246	0/0:11,0:10:0.45:0,0,254	0/1:15,1:17:16.85:17,0,189	0/1:22,0:20:16.58:17,0,194	0/1:16,5:21:98.88:99,0,112	0/0:23,0:23:0.35:0,0,211	0/0:17,0:17:32.86:0,33,631	0/1:12,0:12:48.93:49,0,66	0/1:13,0:12:18.71:19,0,251	0/1:9,0:9:65.28:78,0,65	0/1:6,1:5:22.68:23,0,23
chr10	8124461	.	TAG	T	735.67	PASS	AB=0.850;AC=12;AF=0.222;AN=54;BaseQRankSum=0.649;DP=557;FS=11.094;HRun=0;HaplotypeScore=138.6132;InbreedingCoeff=0.4761;MQ=51.30;MQ0=17;MQRankSum=2.203;QD=4.97;ReadPosRankSum=4.550;VQSLOD=2.3352;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:29:4.06:0,4,10	0/0:11,0:11:12.26:0,12,111	./.	0/0:35,0:8:3.01:0,3,44	0/1:20,0:21:2.94:3,0,103	0/0:24,0:22:8.50:0,9,79	0/0:23,0:23:11.92:0,12,107	0/0:28,0:28:28.33:0,28,351	0/0:17,0:19:14.38:0,14,98	1/1:17,8:25:26.33:246,26,0	1/1:13,3:16:12.03:130,12,0	0/0:15,0:14:11.87:0,12,121	0/0:9,0:11:8.97:0,9,73	0/0:21,0:19:12.45:0,12,100	0/1:16,5:23:4.16:164,0,4	0/1:16,1:17:8.32:8,0,290	0/0:13,0:16:33.04:0,33,388	1/1:11,1:14:17.19:147,17,0	0/0:8,0:10:8.16:0,8,51	0/0:13,0:19:8.28:0,8,61	0/0:21,0:21:5.03:0,5,29	1/1:17,2:21:17.49:136,17,0	0/0:22,0:22:8.60:0,9,124	0/0:19,0:19:30.09:0,30,421	0/1:7,4:11:55.44:62,0,55	0/0:13,0:19:38.30:0,38,388	0/0:11,0:12:18.09:0,18,119	0/0:8,0:6:3.48:0,3,39
chr10	8124472	.	A	AGAGA	1635.23	PASS	AB=1.000;AC=29;AF=0.558;AN=52;BaseQRankSum=-2.919;DP=559;FS=0.740;HRun=0;HaplotypeScore=147.6796;InbreedingCoeff=0.6189;MQ=51.19;MQ0=16;MQRankSum=-3.444;QD=5.78;ReadPosRankSum=-5.228;VQSLOD=0.8402;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:32,0:31:0:0,0,1	1/1:11,0:11:7.19:66,7,0	./.	./.	0/0:20,0:20:11.55:0,12,125	0/1:22,0:20:18.75:19,0,39	1/1:15,0:14:7.84:96,8,0	1/1:26,0:26:12.52:83,13,0	1/1:21,0:20:15.04:249,15,0	0/0:26,0:25:21.09:0,21,177	0/0:16,0:16:11.52:0,12,100	1/1:13,4:15:8.02:204,8,0	1/1:11,0:11:9.03:192,9,0	1/1:19,0:17:8.76:121,9,0	0/0:21,0:20:3.97:0,4,162	0/0:18,0:18:24.06:0,24,332	0/1:16,0:16:32.03:32,0,74	0/0:18,0:18:14.27:0,14,127	1/1:10,0:9:3.54:51,4,0	1/1:20,0:20:8.78:206,9,0	1/1:20,0:19:5.49:35,5,0	0/0:23,0:23:12.43:0,12,139	0/0:22,0:22:5.56:0,6,90	0/0:23,0:23:9.61:0,10,365	0/0:11,0:11:14.81:0,15,127	1/1:20,0:19:25.31:251,25,0	1/1:13,0:13:19.05:212,19,0	1/1:9,0:7:0.47:1,0,0
chr10	8126503	.	GCACACACACA	G	593.40	PASS	AB=0.860;AC=12;AF=0.231;AN=52;BaseQRankSum=0.837;DP=592;FS=10.371;HRun=0;HaplotypeScore=201.2340;InbreedingCoeff=0.4136;MQ=64.71;MQ0=11;MQRankSum=1.415;QD=2.79;ReadPosRankSum=2.512;VQSLOD=2.0091;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:36.59:0,37,1327	0/0:8,0:9:8.53:0,9,290	1/1:26,0:20:1.55:4,2,0	0/1:32,0:25:0:0,0,0	0/0:18,0:20:14.98:0,15,343	0/0:11,0:13:21:0,21,402	0/0:27,0:29:24.08:0,24,740	0/0:23,0:22:14.97:0,15,209	0/0:25,0:30:27.64:0,28,555	0/1:10,0:14:6:6,0,229	./.	0/0:23,0:24:18.05:0,18,503	0/0:19,0:20:24.07:0,24,526	0/0:26,0:26:36.05:0,36,1012	0/1:19,8:29:57.38:156,0,57	0/0:19,0:22:9.03:0,9,170	0/0:17,0:19:27.09:0,27,712	0/1:17,1:18:98.08:252,0,98	0/0:13,0:13:3.48:0,3,76	0/0:9,0:11:9.03:0,9,204	1/1:48,0:46:17.66:267,18,0	./.	1/1:9,1:11:2.94:18,3,0	1/1:27,4:34:2.69:24,3,0	0/0:11,0:11:6.02:0,6,248	0/0:15,0:16:15.05:0,15,388	0/0:23,0:23:12.88:0,13,292	0/0:8,0:9:15.05:0,15,435
chr10	8126569	.	G	GCA	14443.72	PASS	AB=0.558;AC=34;AF=0.607;AN=56;BaseQRankSum=-1.203;DP=808;FS=0.724;HRun=0;HaplotypeScore=144.7808;InbreedingCoeff=0.8732;MQ=50.17;MQ0=26;MQRankSum=2.516;QD=30.34;ReadPosRankSum=1.423;VQSLOD=6.2332;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:74.26:0,74,920	1/1:4,11:14:25.26:447,25,0	0/0:53,0:9:23.77:0,24,255	0/0:68,0:19:40.42:0,40,457	1/1:4,11:15:23.71:400,24,0	1/1:1,21:22:45.15:752,45,0	1/1:7,29:35:63.21:1047,63,0	1/1:12,26:38:15.83:1124,16,0	1/1:6,22:29:61.67:948,62,0	0/0:23,0:23:54.17:0,54,683	0/0:17,0:16:42.14:0,42,540	1/1:3,30:33:78.27:1311,78,0	1/1:3,20:25:42.14:708,42,0	1/1:4,18:22:42.14:708,42,0	0/0:27,0:27:51.17:0,51,655	1/1:5,16:21:42.10:674,42,0	1/1:2,21:22:45.15:743,45,0	0/0:27,0:27:69.17:0,69,862	1/1:7,9:15:27.09:455,27,0	1/1:2,10:12:17.66:303,18,0	1/1:16,84:99:55.74:2612,56,0	0/0:26,0:25:45.14:0,45,575	0/0:17,0:17:39.13:0,39,501	0/0:38,0:38:63.20:0,63,807	1/1:3,15:18:33.11:557,33,0	0/1:7,17:23:17.25:799,0,17	0/1:2,15:17:2.49:517,0,2	1/1:2,8:10:21.07:338,21,0
chr10	8126700	.	TC	T	174.51	PASS	AB=0.917;AC=3;AF=0.054;AN=56;BaseQRankSum=4.128;DP=611;FS=17.071;HRun=5;HaplotypeScore=69.7144;InbreedingCoeff=0.7132;MQ=88.11;MQ0=0;MQRankSum=-1.752;QD=7.59;ReadPosRankSum=0.897;VQSLOD=-0.0816;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:75.25:0,75,1018	0/0:6,0:6:15.05:0,15,204	0/0:23,0:23:65.72:0,66,776	0/0:27,0:27:75.22:0,75,981	0/0:18,0:18:45.15:0,45,614	0/0:16,0:16:48.16:0,48,656	0/0:15,0:15:39.12:0,39,515	0/0:24,0:24:72.21:0,72,966	0/0:26,0:26:75.23:0,75,1009	0/0:34,0:34:90.29:0,90,1217	0/0:23,0:23:66.19:0,66,869	0/0:26,0:26:75.24:0,75,1008	0/0:22,0:22:60.17:0,60,802	0/0:23,0:23:66.21:0,66,886	0/0:25,0:25:75.25:0,75,1016	0/0:20,0:20:60.20:0,60,820	0/0:31,0:31:90.30:0,90,1229	0/0:19,0:19:51.17:0,51,696	0/0:27,0:27:78.21:0,78,1010	0/0:21,0:21:60.20:0,60,819	1/1:5,7:12:23:267,23,0	0/0:23,0:23:66.21:0,66,887	0/0:21,0:21:60.11:0,60,777	0/0:30,0:30:89.66:0,90,1194	0/0:24,0:24:72.23:0,72,967	0/0:26,0:26:75.25:0,75,1024	0/0:12,0:12:36.12:0,36,490	0/1:10,1:11:3.90:4,0,339
chr10	8127847	.	CTTTG	C	16498.36	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=14.280;DP=615;FS=10.329;HRun=0;HaplotypeScore=111.1466;InbreedingCoeff=0.9989;MQ=81.35;MQ0=0;MQRankSum=-11.130;QD=44.71;ReadPosRankSum=3.827;VQSLOD=5.2784;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,138,3632	1/1:0,10:10:24.08:426,24,0	0/0:22,0:22:48.12:0,48,1166	0/0:26,0:26:71.69:0,72,1679	1/1:2,19:21:45.15:840,45,0	1/1:1,21:22:48.16:896,48,0	1/1:4,24:28:63.22:1157,63,0	1/1:3,21:24:63.22:1136,63,0	1/1:1,18:19:45.15:835,45,0	0/0:22,0:22:63.21:0,63,1629	0/0:18,0:18:51.16:0,51,1305	1/1:1,26:27:69.24:1287,69,0	1/1:0,18:18:51.17:935,51,0	1/1:1,19:20:57.19:1047,57,0	0/0:23,0:23:66.23:0,66,1731	1/1:0,19:19:54.19:1008,54,0	1/1:0,25:25:63.22:1175,63,0	0/0:10,0:10:30.10:0,30,800	1/1:3,10:13:30.10:524,30,0	1/1:2,18:20:54.19:1004,54,0	1/1:1,32:33:66.04:1229,66,0	0/0:20,0:20:51.18:0,51,1356	0/0:25,0:25:63.20:0,63,1620	0/0:30,0:30:84.29:0,84,2241	1/1:2,18:20:33.11:616,33,0	1/1:2,18:20:51.17:943,51,0	1/1:1,21:22:57.20:1048,57,0	1/1:1,7:8:21.07:392,21,0
chr10	8127981	.	GCC	G	8360.06	PASS	AB=0.543;AC=33;AF=0.589;AN=56;BaseQRankSum=19.148;DP=539;FS=1.438;HRun=2;HaplotypeScore=171.7037;InbreedingCoeff=0.9186;MQ=89.29;MQ0=0;MQRankSum=-18.197;QD=36.19;ReadPosRankSum=4.706;VQSLOD=5.0945;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,157,3154	1/1:0,8:8:24.08:338,24,0	0/0:25,0:25:75.26:0,75,1488	0/0:26,0:26:72.25:0,72,1396	1/1:0,19:19:48.15:630,48,0	1/1:0,4:4:12.04:164,12,0	1/1:1,14:14:42.13:557,42,0	1/1:0,8:10:18.06:254,18,0	1/1:1,14:15:39.13:528,39,0	0/0:24,0:24:72.25:0,72,1433	0/0:18,0:18:51.17:0,51,1027	1/1:1,14:15:42.09:557,42,0	1/1:2,18:20:57.19:771,57,0	1/1:0,12:12:36.12:504,36,0	0/0:18,0:18:54.17:0,54,1052	1/1:0,10:10:30.10:414,30,0	1/1:0,7:7:18.06:248,18,0	0/0:27,0:27:81.25:0,81,1607	1/1:0,8:8:21.07:299,21,0	1/1:0,16:16:33.11:454,33,0	0/0:45,0:45:99:0,135,2599	0/0:21,0:21:63.21:0,63,1254	0/0:23,0:23:63.22:0,63,1266	0/0:28,0:28:84.29:0,84,1706	1/1:2,25:27:75.23:1010,75,0	0/1:3,16:19:99:584,0,129	1/1:1,16:17:48.16:671,48,0	1/1:0,9:9:27.09:378,27,0
chr10	8127986	.	GCC	G	4816.28	PASS	AB=0.556;AC=33;AF=0.589;AN=56;BaseQRankSum=19.119;DP=540;FS=1.857;HRun=3;HaplotypeScore=182.9713;InbreedingCoeff=0.9184;MQ=89.83;MQ0=0;MQRankSum=-18.802;QD=21.50;ReadPosRankSum=4.881;VQSLOD=2.9520;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,159,2940	1/1:0,8:8:23.99:207,24,0	0/0:24,0:25:69.16:0,69,1245	0/0:27,0:27:72.24:0,72,1294	1/1:0,19:19:46.84:326,47,0	1/1:0,4:4:11.97:96,12,0	1/1:0,14:13:38.89:311,39,0	1/1:1,7:9:17.98:156,18,0	1/1:0,14:14:35.87:286,36,0	0/0:24,0:24:72.24:0,72,1341	0/0:19,0:19:57.18:0,57,1032	1/1:0,14:14:40.49:324,40,0	1/1:1,16:19:53.49:413,53,0	1/1:0,12:12:35.96:300,36,0	0/0:20,0:20:60.21:0,60,1145	1/1:0,10:10:29.95:248,30,0	1/1:1,7:8:17.98:150,18,0	0/0:31,0:31:90.27:0,90,1680	1/1:0,8:8:21:186,21,0	1/1:0,14:15:33.79:267,34,0	0/0:44,0:44:99:0,129,2441	0/0:21,0:21:62.23:0,62,1134	0/0:23,0:23:66.22:0,66,1243	0/0:28,0:28:81.28:0,81,1564	1/1:0,25:25:68.30:575,68,0	0/1:4,16:20:99:335,0,109	1/1:0,16:16:47.95:409,48,0	1/1:0,9:9:26.97:227,27,0
chr10	8127990	.	TC	T	6501.08	PASS	AB=0.556;AC=33;AF=0.589;AN=56;BaseQRankSum=18.939;DP=554;FS=0.000;HRun=3;HaplotypeScore=170.1210;InbreedingCoeff=0.9216;MQ=88.53;MQ0=0;MQRankSum=-18.260;QD=27.55;ReadPosRankSum=3.424;VQSLOD=3.7917;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,151,2395	1/1:1,8:9:27.06:278,27,0	0/0:25,0:25:72.25:0,72,1144	0/0:26,0:26:71.98:0,72,1105	1/1:1,19:20:45.52:442,46,0	1/1:1,4:5:15:145,15,0	1/1:2,14:15:45.10:465,45,0	1/1:3,7:10:24.02:235,24,0	1/1:1,14:15:39.09:409,39,0	0/0:27,0:27:78.26:0,78,1220	0/0:18,0:18:54.17:0,54,838	1/1:2,14:16:47.60:475,48,0	1/1:3,16:19:53.52:515,54,0	1/1:1,12:13:39.08:398,39,0	0/0:22,0:22:66.22:0,66,1048	1/1:0,10:10:30.08:320,30,0	1/1:1,7:8:18.04:193,18,0	0/0:32,0:32:93.32:0,93,1477	1/1:0,8:8:21.04:215,21,0	1/1:1,14:15:39.01:385,39,0	0/0:43,0:43:99:0,126,2014	0/0:21,0:21:63.20:0,63,970	0/0:25,0:25:72.25:0,72,1142	0/0:28,0:28:84.29:0,84,1337	1/1:0,25:25:75.02:759,75,0	0/1:4,16:20:85.73:423,0,86	1/1:2,16:18:54.11:556,54,0	1/1:0,9:9:27.07:287,27,0
chr10	8128090	.	CT	C	4793.12	PASS	AB=0.792;AC=38;AF=0.679;AN=56;BaseQRankSum=9.004;DP=608;FS=3.114;HRun=12;HaplotypeScore=69.8484;InbreedingCoeff=0.3740;MQ=74.49;MQ0=1;MQRankSum=-0.867;QD=10.18;ReadPosRankSum=2.456;VQSLOD=4.4385;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:70:0,70,829	0/1:2,6:8:12.13:91,0,12	0/1:21,1:19:6.39:6,0,135	0/1:14,0:14:18.34:18,0,112	1/1:6,19:26:30.73:350,31,0	1/1:2,21:23:50.80:394,51,0	1/1:4,17:22:18.20:300,18,0	1/1:10,18:28:14.33:256,14,0	1/1:5,7:12:15.73:150,16,0	0/0:21,0:22:25.11:0,25,421	0/1:22,4:26:38.08:38,0,311	1/1:7,18:26:49.79:373,50,0	1/1:4,20:26:27.33:369,27,0	1/1:2,12:14:26.88:209,27,0	0/1:22,3:25:0.58:1,0,535	1/1:5,16:22:34.90:261,35,0	1/1:0,16:16:32.87:255,33,0	0/1:17,3:21:12.77:13,0,409	0/1:5,6:12:38.08:90,0,38	1/1:4,31:35:80.22:588,80,0	1/1:2,0:18:24.44:71,24,0	0/0:30,0:30:52.99:0,53,561	0/0:16,1:18:8.80:0,9,237	0/0:28,3:32:5.84:0,6,488	1/1:6,14:21:6.81:215,7,0	0/1:6,16:22:13.11:257,0,13	1/1:3,18:21:38.62:302,39,0	1/1:2,8:10:23.90:186,24,0
chr10	8128469	.	C	CAG	16715.54	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-10.035;DP=811;FS=11.724;HRun=0;HaplotypeScore=109.0198;InbreedingCoeff=0.9947;MQ=70.15;MQ0=4;MQRankSum=-1.353;QD=35.12;ReadPosRankSum=-0.204;VQSLOD=6.0702;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:44.07:0,44,968	1/1:1,11:12:27.09:449,27,0	0/0:48,0:31:40.73:0,41,733	0/0:77,0:41:25.55:0,26,468	1/1:4,20:24:54.18:896,54,0	1/1:3,14:16:33.11:548,33,0	1/1:7,23:30:60.21:997,60,0	1/1:6,22:28:66.23:1093,66,0	1/1:3,29:32:37.39:1159,37,0	0/0:25,0:25:19:0,19,677	0/0:19,0:19:51.15:0,51,630	1/1:9,32:41:87.30:1446,87,0	1/1:4,25:29:22.41:903,22,0	1/1:0,21:23:51.17:847,51,0	0/0:21,0:22:57:0,57,682	1/1:4,26:29:31.39:1059,31,0	1/1:5,23:28:66.23:1097,66,0	0/0:19,0:19:48.15:0,48,602	1/1:7,18:25:16.31:801,16,0	1/1:6,19:26:23.39:723,23,0	1/1:5,43:48:99:1945,117,0	0/0:22,0:22:57.16:0,57,694	0/0:24,0:23:57.18:0,57,719	0/0:44,0:44:99:0,117,1476	1/1:7,12:19:21.07:349,21,0	1/1:4,23:28:37.43:1135,37,0	1/1:3,22:24:57.19:947,57,0	1/1:3,8:11:21.04:321,21,0
chr10	8129693	.	C	CATGTG	6038.05	PASS	AB=1.000;AC=33;AF=0.611;AN=54;BaseQRankSum=-2.179;DP=715;FS=7.283;HRun=0;HaplotypeScore=172.1428;InbreedingCoeff=0.5757;MQ=72.26;MQ0=11;MQRankSum=-1.428;QD=12.99;ReadPosRankSum=0.144;VQSLOD=3.8929;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:68.56:0,69,1107	0/1:8,0:8:14.78:15,0,35	0/0:46,0:32:51.54:0,52,632	0/0:59,0:32:59.42:0,59,655	1/1:25,0:25:23.66:405,24,0	1/1:23,0:23:6.02:103,6,0	1/1:33,0:29:12.37:193,12,0	1/1:33,0:33:24.90:960,25,0	1/1:12,24:34:5.70:80,6,0	0/1:20,0:20:34.45:34,0,223	0/0:15,0:13:15.05:0,15,206	1/1:28,0:28:23.32:505,23,0	1/1:24,0:24:27.09:489,27,0	1/1:26,0:24:32.85:546,33,0	0/0:25,0:25:17.81:0,18,247	1/1:34,0:34:33.11:619,33,0	1/1:27,0:26:17.09:275,17,0	0/1:13,0:13:50.53:51,0,282	1/1:27,0:26:39.13:663,39,0	1/1:18,0:18:2.99:47,3,0	0/1:27,0:26:8.65:9,0,456	0/0:16,0:16:12.04:0,12,165	0/0:11,0:10:3.01:0,3,41	0/0:30,0:30:17.26:0,17,240	0/1:21,0:21:0.21:0,0,0	1/1:21,0:20:48.12:666,48,0	1/1:21,0:20:23.73:377,24,0	./.
chr10	8129709	.	A	ATGTGATGTGTGTGTG	12221.39	PASS	AB=1.000;AC=35;AF=0.648;AN=54;BaseQRankSum=-4.371;DP=821;FS=3.113;HRun=0;HaplotypeScore=288.0483;InbreedingCoeff=0.3318;MQ=55.32;MQ0=21;MQRankSum=-3.403;QD=20.13;ReadPosRankSum=-1.336;VQSLOD=3.3007;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:40:60.30:0,60,2340	0/0:4,0:10:3.01:0,3,41	0/0:37,0:22:51.96:0,52,634	0/0:51,0:23:59.23:0,59,653	1/1:31,0:32:33.65:615,34,0	1/1:4,15:28:6.02:219,6,0	1/1:46,0:41:20.23:454,20,0	1/1:39,0:38:46.72:1263,47,0	1/1:41,0:39:17.97:511,18,0	0/1:24,0:24:99:1024,0,190	0/1:17,0:14:62.68:63,0,194	1/1:31,0:31:23.67:573,24,0	1/1:30,0:30:36.53:786,37,0	1/1:35,0:32:34.08:862,34,0	0/1:24,0:24:17.89:18,0,227	1/1:37,0:36:45.15:1119,45,0	1/1:11,1:31:27.03:1186,27,0	0/1:16,0:16:99:178,0,384	1/1:25,0:23:57.26:935,57,0	1/1:7,10:32:2.71:47,3,0	0/1:26,0:22:8.67:9,0,440	0/1:23,0:23:83.94:84,0,147	0/1:13,0:11:35.30:98,0,35	0/0:21,0:33:20.93:0,21,273	0/0:10,0:30:0.65:0,1,2	1/1:4,18:33:69.22:1483,69,0	1/1:20,0:19:34.05:695,34,0	./.
chr10	8129713	.	G	GA	3931.31	PASS	AB=0.824;AC=19;AF=0.339;AN=56;BaseQRankSum=-2.174;DP=787;FS=41.914;HRun=0;HaplotypeScore=160.1520;InbreedingCoeff=-0.3670;MQ=53.55;MQ0=23;MQRankSum=0.989;QD=8.22;ReadPosRankSum=3.175;VQSLOD=1.7225;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:98.05:0,98,1244	0/1:8,0:8:0.92:1,0,37	0/0:38,0:20:51.14:0,51,656	0/0:52,0:22:59.75:0,60,675	0/1:14,16:30:99:348,0,125	0/1:22,0:22:18.46:18,0,68	0/1:22,24:41:99:160,0,218	0/1:21,7:38:99:759,0,264	0/0:40,0:38:13:0,13,230	0/0:23,0:23:59.04:0,59,727	0/0:18,0:15:18.53:0,19,249	0/1:16,16:32:19.49:253,0,19	0/1:11,16:27:99:347,0,113	0/1:18,18:33:99:400,0,151	0/0:25,0:24:24.07:0,24,317	0/1:19,20:38:99:362,0,242	0/1:24,1:25:90.39:104,0,90	0/1:16,0:17:7.49:7,0,392	0/1:10,13:21:80.04:515,0,80	0/1:27,0:27:50.32:50,0,51	0/1:24,1:21:8.66:9,0,452	0/0:22,0:22:18.06:0,18,237	0/0:13,0:11:6.02:0,6,81	0/0:33,0:32:20.26:0,20,280	0/1:26,0:25:4.74:5,0,37	0/1:28,0:25:99:282,0,214	0/1:8,8:15:83.30:301,0,83	1/1:11,0:11:2.60:10,3,0
chr10	8129823	.	TACAGAGAA	T	113.50	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.952;DP=682;FS=9.689;HRun=0;HaplotypeScore=206.7613;InbreedingCoeff=0.9287;MQ=89.61;MQ0=0;MQRankSum=-2.802;QD=10.32;ReadPosRankSum=-1.069;VQSLOD=1.6855;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,126,5250	0/0:7,0:7:21.07:0,21,952	0/0:20,0:20:60.19:0,60,2231	0/0:37,0:37:99:0,108,3832	0/0:17,0:17:51.18:0,51,2281	0/0:26,0:26:78.27:0,78,3394	0/0:31,0:30:87.30:0,87,3742	0/0:24,0:24:66.22:0,66,2724	0/0:29,0:28:84.27:0,84,3487	0/0:29,0:29:84.29:0,84,3692	0/0:15,0:15:45.15:0,45,1942	0/0:24,0:24:69.22:0,69,2732	0/0:21,0:21:63.22:0,63,2530	0/0:35,0:34:96.33:0,96,4217	0/0:29,0:29:87.28:0,87,3672	0/0:31,0:31:93.32:0,93,4162	0/0:22,0:22:60.21:0,60,2610	0/0:22,0:22:66.23:0,66,2906	0/0:23,0:23:69.23:0,69,2843	0/0:18,0:18:54.17:0,54,2335	1/1:6,5:11:8.71:196,9,0	0/0:30,0:30:90.31:0,90,4059	0/0:26,0:26:78.27:0,78,3388	0/0:21,0:21:45.15:0,45,1908	0/0:31,0:31:93.28:0,93,3983	0/0:24,0:23:69.24:0,69,2992	0/0:26,0:26:78.27:0,78,3423	0/0:8,0:8:24.08:0,24,1056
chr10	8130374	.	G	GGGTT	24560.72	PASS	AB=0.536;AC=33;AF=0.589;AN=56;BaseQRankSum=-14.063;DP=562;FS=1.447;HRun=0;HaplotypeScore=80.6211;InbreedingCoeff=0.9230;MQ=82.96;MQ0=0;MQRankSum=-5.694;QD=70.98;ReadPosRankSum=1.492;VQSLOD=7.1077;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,111,2118	1/1:2,3:5:15.01:299,15,0	0/0:14,0:14:33.04:0,33,518	0/0:22,0:22:41.90:0,42,910	1/1:2,17:19:51.02:1207,51,0	1/1:2,23:25:69.24:1862,69,0	1/1:4,10:16:36.12:898,36,0	1/1:11,20:33:96.33:2524,96,0	1/1:0,16:17:42.14:1150,42,0	0/0:24,0:24:69.24:0,69,1337	0/0:11,0:11:33.11:0,33,640	1/1:0,24:23:69.24:1889,69,0	1/1:1,19:22:60.21:1626,60,0	1/1:0,21:23:63.12:1721,63,0	0/0:20,0:20:54.17:0,54,1013	1/1:1,22:23:66.18:1744,66,0	1/1:1,23:25:60.21:1644,60,0	0/0:9,0:9:24.08:0,24,463	1/1:4,24:29:84.21:2162,84,0	1/1:1,22:23:66.03:1555,66,0	0/0:33,0:33:99:0,99,1849	0/0:16,0:16:48.14:0,48,865	0/0:16,0:16:45.14:0,45,815	0/0:13,0:13:39.13:0,39,756	1/1:2,15:18:51.05:1206,51,0	0/1:2,12:15:71.19:963,0,71	1/1:0,20:21:57.20:1535,57,0	1/1:0,7:8:21.07:575,21,0
chr10	8134410	.	G	GCACA	16743.61	PASS	AB=0.589;AC=43;AF=0.768;AN=56;BaseQRankSum=-2.435;DP=773;FS=2.463;HRun=0;HaplotypeScore=135.6434;InbreedingCoeff=0.6041;MQ=63.46;MQ0=10;MQRankSum=0.439;QD=26.96;ReadPosRankSum=3.552;VQSLOD=4.7254;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:69.18:0,69,1116	1/1:5,9:17:29.57:618,30,0	0/0:22,0:11:0.02:0,0,203	0/0:29,0:14:17.97:0,18,227	0/0:39,0:41:95.84:0,96,1441	1/1:6,17:25:53.65:1193,54,0	1/1:7,12:23:32.37:631,32,0	1/1:14,17:34:63.14:1164,63,0	1/1:3,15:19:33.11:812,33,0	1/1:6,0:32:72.27:345,72,0	0/1:7,0:22:61.26:111,0,61	1/1:8,15:27:38.01:779,38,0	1/1:6,23:34:65.70:1491,66,0	1/1:6,21:30:59.59:1300,60,0	1/1:6,0:40:29.73:298,30,0	0/0:20,0:22:57.12:0,57,829	1/1:4,10:15:30.10:722,30,0	0/1:7,0:20:19.77:94,0,20	1/1:6,8:15:26.83:546,27,0	1/1:5,16:23:44.89:1026,45,0	1/1:6,0:31:1.70:189,2,0	1/1:10,0:27:37.25:164,37,0	0/1:10,0:38:78.82:211,0,79	1/1:5,0:19:27.45:125,27,0	1/1:9,31:44:65.70:1508,66,0	1/1:6,24:36:80.49:1638,80,0	1/1:6,22:32:62.42:1336,62,0	1/1:1,9:10:18.06:445,18,0
chr10	8135897	.	GGTGTGTGT	G	8685.07	PASS	AB=0.781;AC=43;AF=0.796;AN=54;BaseQRankSum=4.687;DP=675;FS=13.404;HRun=0;HaplotypeScore=191.6830;InbreedingCoeff=0.4965;MQ=68.37;MQ0=7;MQRankSum=-9.536;QD=16.77;ReadPosRankSum=1.230;VQSLOD=3.3093;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:34:57.16:0,57,2041	1/1:10,4:14:3.01:76,3,0	0/0:38,0:27:3.48:0,3,66	./.	0/0:17,0:21:30.07:0,30,598	1/1:13,12:27:29.96:652,30,0	1/1:11,7:20:21.07:460,21,0	1/1:19,0:19:5.98:81,6,0	1/1:13,11:26:26.70:634,27,0	0/1:24,0:29:22.54:23,0,61	0/1:10,2:16:23.90:238,0,24	1/1:13,12:26:36.49:826,36,0	1/1:15,13:28:24.08:605,24,0	1/1:7,13:22:24.08:544,24,0	1/1:12,2:31:19.44:306,19,0	0/0:22,0:35:63.18:0,63,1289	1/1:12,7:20:3.55:486,4,0	0/1:11,0:16:26.99:27,0,31	1/1:7,1:10:9.03:184,9,0	1/1:14,14:29:44.74:1034,45,0	1/1:27,1:25:12.04:222,12,0	1/1:20,0:34:12.69:152,13,0	1/1:13,0:23:17.05:94,17,0	1/1:20,0:27:8.84:43,9,0	1/1:11,12:25:30.10:714,30,0	1/1:11,9:20:21.05:477,21,0	1/1:7,11:21:29.23:679,29,0	1/1:2,1:4:6.02:131,6,0
chr10	8136929	.	ATATGTG	A	133.30	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.903;DP=915;FS=1.736;HRun=0;HaplotypeScore=211.9448;InbreedingCoeff=0.9830;MQ=58.84;MQ0=1;MQRankSum=-2.781;QD=4.76;ReadPosRankSum=-1.700;VQSLOD=2.0230;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:81.28:0,81,2715	0/0:15,0:15:29.73:0,30,859	0/0:45,0:39:95.25:0,95,2441	0/0:39,0:31:76.78:0,77,2118	0/0:30,0:30:75.25:0,75,2513	0/0:26,0:26:48.16:0,48,1522	0/0:31,0:31:77.97:0,78,2431	0/0:54,0:54:99:0,147,4444	0/0:35,0:35:51.17:0,51,1686	0/0:37,0:37:96.33:0,96,3090	0/0:30,0:30:75.07:0,75,2261	0/0:37,0:37:84.29:0,84,2927	0/0:35,0:35:69.22:0,69,2294	0/0:23,0:23:45.15:0,45,1378	0/0:33,0:33:84.27:0,84,2688	0/0:39,0:39:90.31:0,90,2670	0/0:31,0:31:69.24:0,69,2408	0/0:30,0:30:75.24:0,75,2176	0/0:22,0:22:57.20:0,57,1712	0/0:35,0:35:75.24:0,75,2523	1/1:2,26:28:14.92:222,15,0	0/0:47,0:47:99:0,120,3855	0/0:20,0:20:57.18:0,57,1806	0/0:35,0:34:90.30:0,90,2775	0/0:36,0:36:69.24:0,69,2317	0/0:34,0:34:90.12:0,90,2610	0/0:35,0:35:84.29:0,84,2692	0/0:21,0:21:42.14:0,42,1239
chr10	8136959	.	G	GTGTATGTA	13719.91	PASS	AB=0.637;AC=44;AF=0.846;AN=52;BaseQRankSum=1.905;DP=1001;FS=10.933;HRun=0;HaplotypeScore=247.6215;InbreedingCoeff=0.0809;MQ=56.00;MQ0=9;MQRankSum=-1.187;QD=15.33;ReadPosRankSum=-2.249;VQSLOD=2.3800;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:51.13:0,51,1049	1/1:5,12:18:12.04:489,12,0	./.	./.	1/1:17,0:33:26.95:243,27,0	1/1:10,14:27:18.06:720,18,0	1/1:28,0:28:15.02:319,15,0	1/1:66,0:66:35.72:278,36,0	1/1:13,31:49:36.11:1335,36,0	0/1:19,0:43:53.48:471,0,53	1/1:11,0:33:38.78:315,39,0	1/1:24,22:47:21.07:800,21,0	1/1:16,21:38:9.03:365,9,0	1/1:6,21:31:18.06:716,18,0	0/1:13,0:42:5.46:467,0,5	0/1:19,0:43:42.80:321,0,43	1/1:19,0:27:12:198,12,0	1/1:14,0:29:3.96:172,4,0	1/1:17,1:16:9.02:259,9,0	1/1:15,18:36:25.88:869,26,0	1/1:29,0:36:28.86:301,29,0	0/1:19,0:46:99:341,0,143	0/1:13,0:28:19.98:168,0,20	0/1:16,0:31:80.30:208,0,80	1/1:15,18:38:21.05:756,21,0	1/1:15,25:43:81.15:2240,81,0	1/1:19,20:43:27.09:1012,27,0	1/1:12,6:18:9.03:356,9,0
chr10	8137856	.	T	TA	1803.20	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=11.304;DP=486;FS=3.547;HRun=6;HaplotypeScore=52.5899;InbreedingCoeff=0.9810;MQ=71.44;MQ0=0;MQRankSum=0.422;QD=31.09;ReadPosRankSum=1.769;VQSLOD=4.3405;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:42.07:0,42,420	0/0:10,0:10:30.07:0,30,306	0/0:8,0:8:21.05:0,21,213	0/0:10,0:10:23.84:0,24,227	1/1:3,37:40:99:1283,102,0	0/0:18,0:18:48.11:0,48,489	0/0:10,0:10:27.06:0,27,275	0/0:25,0:25:69.13:0,69,694	0/0:11,0:11:30.07:0,30,306	0/0:18,0:18:51.12:0,51,520	0/0:17,0:17:48.11:0,48,490	0/0:15,0:15:39.09:0,39,398	0/0:17,0:17:48.11:0,48,490	0/0:19,0:19:51.12:0,51,520	0/0:6,0:6:15.03:0,15,153	1/1:1,17:18:51.16:642,51,0	0/0:26,0:26:72.16:0,72,735	0/0:20,0:20:60.14:0,60,611	0/0:20,0:20:54.11:0,54,546	0/0:24,0:24:63.11:0,63,629	0/0:8,0:8:24.05:0,24,245	0/0:11,0:11:30.07:0,30,306	0/0:10,0:10:30.07:0,30,306	0/0:9,0:9:24.05:0,24,245	0/0:36,0:36:99:0,102,1036	0/0:29,0:29:81.18:0,81,822	0/0:26,0:26:69.15:0,69,704	0/0:9,0:9:18.03:0,18,184
chr10	8138211	.	G	GC	2082.95	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-9.087;DP=673;FS=1.182;HRun=0;HaplotypeScore=64.2905;InbreedingCoeff=0.9979;MQ=77.40;MQ0=0;MQRankSum=-1.196;QD=41.66;ReadPosRankSum=1.660;VQSLOD=4.3550;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:90.28:0,90,1239	0/0:17,0:17:51.17:0,51,712	0/0:27,0:27:81.24:0,81,1066	0/0:27,0:27:77.16:0,77,973	1/1:1,28:29:81.28:1294,81,0	0/0:35,0:35:99:0,102,1426	0/0:18,0:18:51.17:0,51,710	0/0:28,0:28:78.26:0,78,1090	0/0:28,0:28:81.27:0,81,1131	0/0:31,0:31:90.26:0,90,1232	0/0:30,0:30:90.29:0,90,1240	0/0:23,0:23:69.23:0,69,964	0/0:18,0:18:54.18:0,54,754	0/0:26,0:26:78.26:0,78,1091	0/0:28,0:28:84.28:0,84,1164	1/1:0,21:21:57.19:910,57,0	0/0:18,0:18:48.14:0,48,653	0/0:19,0:19:54.16:0,54,736	0/0:15,0:15:45.15:0,45,629	0/0:26,0:26:75.24:0,75,1030	0/0:18,0:18:51.16:0,51,696	0/0:26,0:26:78.25:0,78,1075	0/0:25,0:25:75.25:0,75,1048	0/0:16,0:16:48.14:0,48,651	0/0:26,0:26:72.24:0,72,1006	0/0:26,0:26:78.25:0,78,1072	0/0:34,0:34:99:0,99,1385	0/0:7,0:7:21.07:0,21,290
chr10	8138525	.	TA	T	1894.30	PASS	AB=0.974;AC=36;AF=0.643;AN=56;BaseQRankSum=4.381;DP=589;FS=2.727;HRun=1;HaplotypeScore=101.7136;InbreedingCoeff=0.1573;MQ=67.81;MQ0=0;MQRankSum=-3.859;QD=3.98;ReadPosRankSum=8.139;VQSLOD=0.1583;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:66.17:0,66,953	1/1:14,0:14:23.49:65,23,0	0/0:27,0:22:59.93:0,60,773	0/0:20,0:19:33.91:0,34,501	0/0:25,0:25:71.27:0,71,413	1/1:22,0:22:22.93:100,23,0	0/1:19,0:19:27.66:62,0,28	0/1:35,0:35:39.38:39,0,201	0/1:15,0:15:19.84:43,0,20	1/1:29,0:29:5.77:93,6,0	0/1:25,1:26:28.75:129,0,29	1/1:16,0:16:31.89:113,32,0	1/1:10,1:11:18.84:82,19,0	0/1:15,1:16:37.49:89,0,37	1/1:29,0:29:12.45:140,12,0	0/0:18,0:18:47.90:0,48,256	1/1:14,0:14:26.93:99,27,0	0/1:9,1:10:20.01:52,0,20	0/1:19,0:19:14.87:59,0,15	1/1:35,0:35:27.02:181,27,0	0/1:25,0:25:46.64:47,0,52	1/1:23,1:25:1.72:124,2,0	1/1:16,0:16:5.58:83,6,0	1/1:21,0:21:1.44:95,1,0	1/1:18,0:18:27.50:76,28,0	0/1:24,2:26:31.53:93,0,32	1/1:27,0:27:35.38:185,35,0	0/1:8,0:8:6.12:30,0,6
chr10	8138526	.	AC	A	11642.68	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-0.687;DP=581;FS=0.615;HRun=8;HaplotypeScore=68.9244;InbreedingCoeff=0.9938;MQ=66.26;MQ0=0;MQRankSum=-2.842;QD=22.61;ReadPosRankSum=2.808;VQSLOD=5.5228;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:57.13:0,57,672	1/1:0,14:14:39.06:377,39,0	0/0:24,0:20:47.95:0,48,511	0/0:18,0:17:18.11:0,18,291	1/1:4,0:25:42.77:126,43,0	1/1:0,22:22:60.10:579,60,0	1/1:3,16:19:45.07:434,45,0	1/1:11,23:34:63.08:603,63,0	1/1:2,13:15:36.06:348,36,0	1/1:1,27:28:84.12:804,84,0	1/1:3,21:24:54:509,54,0	1/1:0,16:16:42.07:405,42,0	1/1:1,10:11:24.03:231,24,0	1/1:5,11:16:36.05:347,36,0	1/1:2,27:29:75.12:724,75,0	1/1:3,0:18:30.55:90,31,0	1/1:0,14:14:36.06:347,36,0	1/1:3,7:10:24.04:231,24,0	1/1:2,17:19:48.04:455,48,0	1/1:1,34:35:96.15:927,96,0	1/1:4,21:25:57.09:550,57,0	1/1:4,21:25:60.07:578,60,0	1/1:1,15:16:38.91:376,39,0	1/1:2,19:21:54.08:521,54,0	1/1:0,18:18:51.08:492,51,0	1/1:5,21:26:69.09:659,69,0	1/1:1,26:27:75.12:724,75,0	1/1:1,7:8:21.03:203,21,0
chr10	8138887	.	CGT	C	1275.12	PASS	AB=0.891;AC=14;AF=0.250;AN=56;BaseQRankSum=11.488;DP=694;FS=0.969;HRun=0;HaplotypeScore=92.6311;InbreedingCoeff=0.1546;MQ=70.74;MQ0=10;MQRankSum=-0.524;QD=5.34;ReadPosRankSum=3.156;VQSLOD=2.6638;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,3:32:4.63:0,5,1014	0/1:12,2:14:49.59:50,0,212	0/0:52,0:28:39.10:0,39,557	0/0:38,0:26:23.65:0,24,266	1/1:8,9:18:23.90:261,24,0	0/0:18,1:19:0.77:0,1,461	0/1:20,3:23:60.84:61,0,491	0/1:32,2:34:16.51:17,0,703	0/0:25,2:27:24.85:0,25,840	0/0:29,2:31:8.79:0,9,1029	0/0:15,0:15:36.12:0,36,568	0/1:21,3:24:45.80:46,0,742	0/0:28,0:28:54.17:0,54,828	0/0:16,0:16:39.13:0,39,605	0/0:21,2:23:12.86:0,13,669	1/1:5,18:25:62.74:680,63,0	0/0:33,2:36:4.58:0,5,981	0/0:11,0:11:13.15:0,13,321	0/1:27,1:27:4.35:4,0,531	0/0:31,2:33:7.63:0,8,1024	1/1:9,0:26:42.61:210,43,0	0/0:21,0:21:48.14:0,48,712	0/1:19,2:21:28.52:29,0,523	0/0:34,2:36:1.60:0,2,971	0/0:13,0:13:24.08:0,24,377	0/1:14,3:17:60.85:61,0,518	0/0:24,0:24:36.12:0,36,566	0/1:6,1:7:23.27:23,0,130
chr10	8140059	.	TTCTC	T	8089.75	PASS	AB=0.975;AC=24;AF=0.429;AN=56;BaseQRankSum=12.043;DP=756;FS=0.285;HRun=0;HaplotypeScore=208.0187;InbreedingCoeff=-0.7517;MQ=46.53;MQ0=8;MQRankSum=-4.599;QD=12.48;ReadPosRankSum=0.546;VQSLOD=4.4055;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:40.17:0,40,1381	0/0:5,0:5:15.05:0,15,337	0/0:34,0:14:33.09:0,33,591	0/0:40,0:17:44.94:0,45,926	0/1:32,0:32:99:300,0,256	0/1:36,0:36:99:497,0,1120	0/1:23,0:23:99:388,0,361	0/1:38,0:38:99:551,0,738	0/1:30,0:30:99:474,0,553	0/1:42,0:42:99:335,0,1318	0/1:15,0:15:99:175,0,336	0/1:27,0:27:99:486,0,618	0/1:33,1:34:99:467,0,1132	0/1:28,0:28:99:509,0,603	0/1:31,6:37:99:435,0,1086	0/1:29,0:29:99:249,0,288	0/1:32,0:32:99:275,0,731	0/1:13,0:13:99:162,0,395	0/1:19,0:18:99:146,0,600	0/1:19,6:25:99:270,0,662	0/1:22,0:22:99:302,0,240	0/1:20,0:20:99:164,0,567	0/1:22,0:21:99:228,0,473	0/1:24,0:24:99:167,0,364	0/1:28,0:28:99:307,0,991	0/1:19,9:28:99:374,0,748	0/1:36,0:36:99:606,0,910	0/1:8,0:8:41.29:225,0,41
chr10	8140063	.	C	CCT	293.56	PASS	AB=0.972;AC=9;AF=0.161;AN=56;BaseQRankSum=8.705;DP=753;FS=4.071;HRun=0;HaplotypeScore=213.4150;InbreedingCoeff=-0.0297;MQ=46.39;MQ0=8;MQRankSum=4.023;QD=1.82;ReadPosRankSum=-5.165;VQSLOD=1.4100;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:61.23:0,61,1060	0/0:5,0:5:15.05:0,15,235	0/0:34,0:15:33:0,33,490	0/0:41,0:17:42.14:0,42,664	0/0:31,0:31:69.62:0,70,683	0/0:35,0:36:50.08:0,50,939	0/1:24,0:24:13.32:13,0,336	0/0:33,0:33:25.21:0,25,630	0/0:28,0:28:45.91:0,46,511	0/1:40,0:40:99:112,0,980	0/1:14,1:15:34.94:35,0,227	0/0:28,0:28:16.89:0,17,589	0/0:34,0:34:56.45:0,56,956	0/0:29,0:29:59.18:0,59,654	0/0:37,0:37:6.10:0,6,888	0/0:30,0:30:61.09:0,61,651	0/0:33,0:33:61.68:0,62,840	0/1:12,0:12:58.22:58,0,262	0/0:23,0:21:33.51:0,34,698	0/0:26,0:26:55.56:0,56,640	0/0:21,0:22:24.50:0,25,335	0/1:18,1:19:34.64:35,0,408	0/1:20,1:20:94.26:94,0,402	0/1:23,1:24:68.14:68,0,444	0/0:27,0:27:50.64:0,51,804	0/0:28,0:28:37.26:0,37,714	0/0:36,0:36:11.26:0,11,742	1/1:6,0:6:1.81:14,2,0
chr10	8140084	.	TC	T	1664.08	PASS	AB=0.818;AC=13;AF=0.232;AN=56;BaseQRankSum=14.139;DP=726;FS=5.477;HRun=2;HaplotypeScore=158.0606;InbreedingCoeff=-0.3076;MQ=51.27;MQ0=7;MQRankSum=-11.591;QD=4.58;ReadPosRankSum=-1.379;VQSLOD=-0.0435;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:89.49:0,89,1325	0/0:11,0:11:33.11:0,33,488	0/0:26,0:16:47.79:0,48,627	0/0:35,0:17:38.91:0,39,532	0/0:28,0:28:70.88:0,71,980	0/1:27,6:33:99:137,0,1013	0/0:21,2:23:19.51:0,20,731	0/0:27,0:27:70.15:0,70,976	0/1:14,13:27:99:321,0,490	0/0:40,0:40:72.77:0,73,1320	0/0:14,1:15:16.59:0,17,367	0/1:20,7:27:99:202,0,761	0/1:25,9:34:99:263,0,925	0/1:26,8:34:99:203,0,884	0/1:31,6:37:99:101,0,1031	0/0:29,0:29:72.66:0,73,956	0/1:33,3:36:26.42:26,0,1039	0/0:11,0:11:22.85:0,23,339	0/0:22,1:21:4.02:0,4,645	0/1:18,7:25:99:151,0,690	0/1:19,0:19:7.47:7,0,337	0/0:18,0:18:19.24:0,19,567	0/0:21,1:21:16.10:0,16,612	0/0:21,1:22:25.84:0,26,588	0/1:21,3:24:15:15,0,741	0/1:21,4:25:81.25:81,0,824	0/1:30,8:37:99:210,0,1047	0/1:1,3:4:32.91:98,0,33
chr10	8140091	.	CT	C	1169.30	PASS	AB=0.808;AC=12;AF=0.214;AN=56;BaseQRankSum=12.902;DP=730;FS=4.704;HRun=3;HaplotypeScore=149.5278;InbreedingCoeff=-0.2897;MQ=54.11;MQ0=4;MQRankSum=-11.623;QD=3.53;ReadPosRankSum=-2.234;VQSLOD=-0.4696;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:95.51:0,96,1325	0/0:11,0:11:33.11:0,33,467	0/0:28,0:18:39.01:0,39,593	0/0:35,0:22:55.46:0,55,652	0/0:30,0:30:85.03:0,85,1104	0/1:27,5:32:70.19:70,0,971	0/0:21,0:21:51.16:0,51,715	0/0:23,0:23:66.21:0,66,920	0/1:18,10:28:99:258,0,619	0/0:41,0:41:99:0,108,1398	0/0:15,1:16:41.44:0,41,484	0/1:21,7:28:99:163,0,779	0/1:25,8:33:99:185,0,892	0/1:27,7:35:99:140,0,943	0/1:30,7:37:71.96:72,0,1051	0/0:28,0:28:72.17:0,72,969	0/0:33,4:37:9.20:0,9,1137	0/0:11,0:11:31.46:0,31,379	0/1:20,3:22:22.46:22,0,589	0/1:20,7:27:99:129,0,759	0/1:16,5:21:43.57:44,0,464	0/0:19,0:19:50.10:0,50,664	0/0:21,1:21:52.14:0,52,743	0/0:16,3:19:24.46:0,24,550	0/0:22,3:25:0.39:0,0,825	0/1:23,3:26:37.27:37,0,833	0/1:31,6:36:99:106,0,1115	0/1:1,3:4:31.17:92,0,31
chr10	8140206	.	ATG	A	1179.37	PASS	AB=0.963;AC=18;AF=0.321;AN=56;BaseQRankSum=10.064;DP=670;FS=0.000;HRun=0;HaplotypeScore=98.6015;InbreedingCoeff=0.6349;MQ=74.24;MQ0=2;MQRankSum=-0.678;QD=5.49;ReadPosRankSum=1.781;VQSLOD=2.4817;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:75.19:0,75,1134	0/0:14,0:14:33.06:0,33,467	0/0:42,0:35:50.94:0,51,758	0/1:35,1:33:21.01:21,0,527	1/1:26,0:26:50.79:398,51,0	0/0:30,0:30:75.22:0,75,1182	0/0:27,0:27:51.16:0,51,812	0/0:25,0:25:60.16:0,60,866	0/0:31,0:31:81.22:0,81,1301	0/1:15,0:15:9.76:19,0,10	1/1:8,0:8:6.47:52,6,0	0/0:31,0:31:78.14:0,78,1153	0/0:27,0:27:72.15:0,72,1108	0/0:23,0:23:48.13:0,48,730	1/1:12,0:12:6.47:53,6,0	1/1:22,0:22:47.86:378,48,0	0/0:33,0:34:61.01:0,61,1087	0/0:9,0:9:1.14:0,1,3	0/1:19,3:22:12.46:12,0,409	0/0:38,0:38:90.25:0,90,1427	1/1:37,1:38:58.51:217,59,0	1/1:12,0:12:12.70:128,13,0	0/1:8,0:8:2.22:21,0,2	1/1:16,0:16:4.87:69,5,0	0/0:23,0:23:60.18:0,60,939	0/0:27,0:27:72.20:0,72,1131	0/0:25,1:26:10.61:0,11,910	0/0:11,0:11:23.95:0,24,360
chr10	8140217	.	TGTG	T	1781.29	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=4.908;DP=639;FS=0.000;HRun=0;HaplotypeScore=106.4686;InbreedingCoeff=0.3495;MQ=68.95;MQ0=4;MQRankSum=-0.950;QD=14.60;ReadPosRankSum=-0.077;VQSLOD=3.1118;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:84.25:0,84,1707	0/0:13,0:13:39.10:0,39,714	0/0:37,0:29:66.05:0,66,1223	0/0:36,0:31:40.26:0,40,823	1/1:1,28:28:51.12:861,51,0	0/0:28,0:28:78.23:0,78,1668	0/0:21,0:21:57.18:0,57,1200	0/0:25,0:25:72.21:0,72,1329	0/0:29,0:29:84.23:0,84,1848	0/1:12,0:15:12.10:12,0,117	0/1:5,0:7:35.49:35,0,62	0/0:29,0:29:87.20:0,87,1724	0/0:26,0:26:78.12:0,78,1583	0/0:20,0:20:54.13:0,54,1103	0/1:6,0:15:5.19:43,0,5	1/1:0,23:23:47.89:841,48,0	0/0:29,0:29:67.18:0,67,1559	0/0:3,0:9:6.67:0,7,33	0/0:17,0:17:41.29:0,41,764	0/0:31,0:31:93.30:0,93,2050	0/0:36,0:36:50.14:0,50,178	0/1:11,0:12:57.73:105,0,58	0/0:9,0:11:3.54:0,4,41	0/1:5,0:20:35.61:36,0,36	0/0:24,0:24:69.22:0,69,1458	0/0:27,0:27:78.26:0,78,1688	0/0:27,1:28:21.35:0,21,1340	0/0:8,0:8:24.05:0,24,497
chr10	8140218	.	GT	G	2261.23	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=9.735;DP=627;FS=0.000;HRun=1;HaplotypeScore=82.4759;InbreedingCoeff=0.9739;MQ=68.44;MQ0=4;MQRankSum=-1.351;QD=13.38;ReadPosRankSum=0.366;VQSLOD=2.4208;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:83.81:0,84,1078	0/0:13,0:13:39.06:0,39,468	0/0:37,1:30:58.79:0,59,766	0/0:34,0:29:46.65:0,47,614	1/1:29,0:28:49.96:304,50,0	0/0:27,0:27:78.22:0,78,1055	0/0:24,0:24:66.12:0,66,833	0/0:27,0:27:78.16:0,78,938	0/0:28,0:28:84.22:0,84,1157	1/1:16,0:15:13.60:133,14,0	1/1:7,0:7:12.75:99,13,0	0/0:30,0:30:90.14:0,90,1136	0/0:26,0:26:75.12:0,75,975	0/0:19,0:19:51.14:0,51,690	1/1:11,0:11:11.87:92,12,0	1/1:23,0:23:46.98:283,47,0	0/0:29,0:29:75.14:0,75,991	1/1:5,0:5:8.55:51,9,0	0/0:17,0:17:24.36:0,24,465	0/0:31,0:31:93.29:0,93,1293	1/1:1,34:35:80.86:1089,81,0	1/1:12,0:12:18.41:156,18,0	1/1:12,0:12:17.97:134,18,0	1/1:19,0:19:19.92:137,20,0	0/0:23,0:23:69.20:0,69,936	0/0:26,0:26:78.22:0,78,1060	0/0:27,0:27:49.54:0,50,879	0/0:8,0:8:18.64:0,19,290
chr10	8140779	.	A	AAAT	5583.44	PASS	AB=0.900;AC=44;AF=0.880;AN=50;BaseQRankSum=-2.920;DP=269;FS=2.832;HRun=0;HaplotypeScore=46.4622;InbreedingCoeff=0.2418;MQ=79.49;MQ0=0;MQRankSum=0.426;QD=23.56;ReadPosRankSum=-0.115;VQSLOD=4.2461;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:11,0:11:18.83:19,0,265	1/1:1,0:1:3.01:36,3,0	0/0:15,0:14:2.84:0,3,40	0/0:8,0:7:3.01:0,3,35	1/1:7,0:7:6:58,6,0	1/1:2,14:18:39.13:771,39,0	1/1:5,2:7:3.01:59,3,0	1/1:17,15:33:57.18:1055,57,0	1/1:5,3:8:12.04:233,12,0	1/1:7,0:7:12.04:153,12,0	1/1:8,0:8:6.02:79,6,0	1/1:2,2:4:6.02:119,6,0	1/1:8,5:13:12.04:237,12,0	0/1:6,2:8:29.28:163,0,29	1/1:10,0:10:3.01:46,3,0	1/1:6,0:9:6.02:76,6,0	1/1:6,13:21:33.11:630,33,0	1/1:11,0:11:12.04:162,12,0	1/1:5,5:11:15.05:274,15,0	1/1:3,3:6:9.50:179,10,0	1/1:2,0:2:1.25:3,1,0	./.	./.	./.	1/1:2,7:9:18.06:356,18,0	1/1:5,3:8:9.03:178,9,0	1/1:5,9:14:18.06:356,18,0	1/1:5,5:11:18.06:341,18,0
chr10	8143281	.	AC	A	1524.92	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.978;DP=672;FS=6.561;HRun=3;HaplotypeScore=90.8820;InbreedingCoeff=0.9973;MQ=93.85;MQ0=0;MQRankSum=-1.043;QD=29.33;ReadPosRankSum=2.910;VQSLOD=3.2301;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:58:99:0,169,2343	0/0:10,0:10:30.10:0,30,432	0/0:30,0:30:81.19:0,81,1060	0/0:31,0:31:81.22:0,81,1101	1/1:1,23:24:63.09:754,63,0	0/0:21,0:21:60.20:0,60,854	0/0:20,0:20:60.20:0,60,859	0/0:27,0:27:65.69:0,66,898	0/0:32,0:32:96.31:0,96,1347	0/0:23,0:23:63.21:0,63,904	0/0:13,0:13:36.07:0,36,482	0/0:29,0:29:81.27:0,81,1165	0/0:26,0:26:75.25:0,75,1077	0/0:26,0:26:72.19:0,72,996	0/0:28,0:28:84.26:0,84,1170	1/1:1,27:28:72.23:893,72,0	0/0:22,0:22:66.22:0,66,950	0/0:13,0:13:39.12:0,39,543	0/0:22,0:22:63.20:0,63,889	0/0:26,0:26:75.23:0,75,1054	0/0:34,0:34:99:0,99,1422	0/0:16,0:16:42.10:0,42,565	0/0:16,0:16:33.09:0,33,452	0/0:30,0:30:90.29:0,90,1256	0/0:18,0:18:54.17:0,54,759	0/0:12,0:12:33.11:0,33,472	0/0:30,0:30:87.26:0,87,1215	0/0:7,0:7:21.06:0,21,284
chr10	8143527	.	A	AACACACACACACACAC	14502.74	PASS	AB=0.909;AC=45;AF=0.865;AN=52;BaseQRankSum=3.313;DP=645;FS=1.312;HRun=0;HaplotypeScore=325.0010;InbreedingCoeff=0.6674;MQ=53.48;MQ0=2;MQRankSum=-5.633;QD=28.83;ReadPosRankSum=-1.637;VQSLOD=3.0906;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:41:75.20:0,75,2793	1/1:12,0:12:11.69:241,12,0	0/0:37,0:24:11.39:0,11,1396	0/0:42,0:31:30.67:0,31,1114	1/1:22,2:26:2.93:229,3,0	1/1:18,0:18:8.99:210,9,0	1/1:33,0:32:22.30:714,22,0	1/1:31,0:28:30.10:1386,30,0	1/1:25,0:25:14.06:520,14,0	1/1:13,0:13:18.04:731,18,0	./.	1/1:26,0:26:10.04:686,10,0	1/1:20,0:20:12.04:443,12,0	./.	1/1:27,0:27:12.48:275,12,0	1/1:31,7:41:48.81:3120,49,0	1/1:19,0:19:21.07:1035,21,0	1/1:10,0:10:9.03:507,9,0	1/1:19,0:19:27.05:996,27,0	1/1:10,0:10:0.47:1,0,0	1/1:32,0:28:8.51:266,9,0	1/1:19,0:19:8.68:193,9,0	1/1:20,0:20:2.68:88,3,0	0/1:18,0:20:0.49:1,0,0	1/1:20,0:20:6:177,6,0	1/1:26,0:25:11.92:397,12,0	1/1:29,0:29:30.10:1755,30,0	1/1:7,0:7:9.03:533,9,0
chr10	8143549	.	C	CTA	3161.54	PASS	AB=0.532;AC=21;AF=0.389;AN=54;BaseQRankSum=-6.188;DP=481;FS=3.955;HRun=0;HaplotypeScore=103.1709;InbreedingCoeff=0.5917;MQ=68.79;MQ0=2;MQRankSum=-3.184;QD=15.65;ReadPosRankSum=0.990;VQSLOD=3.6911;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:90.24:0,90,1344	0/0:2,4:6:2.76:0,3,16	0/0:46,0:34:99:0,99,1419	0/0:32,0:23:59.90:0,60,828	0/0:18,0:18:28.32:0,28,425	0/1:2,11:14:13.83:49,0,14	0/1:2,15:16:21.25:129,0,21	1/1:1,21:20:52.37:939,52,0	0/1:1,21:25:1.67:171,0,2	0/0:14,0:14:34.20:0,34,311	0/0:7,0:7:8.98:0,9,73	1/1:0,16:16:6.01:61,6,0	0/1:1,16:17:5.72:113,0,6	./.	0/0:19,0:19:19.43:0,19,147	0/0:26,0:26:41.44:0,41,366	1/1:0,13:14:9.03:129,9,0	0/0:7,0:7:14.88:0,15,112	1/1:2,7:10:10.46:314,10,0	1/1:10,1:11:27.06:398,27,0	0/0:24,0:24:23.55:0,24,298	0/0:13,0:13:14.12:0,14,119	0/0:1,0:5:2.29:0,2,9	0/0:15,0:15:2.72:0,3,24	0/1:4,13:18:0:0,0,0	1/1:1,13:14:39.06:564,39,0	1/1:1,17:19:21.04:273,21,0	1/1:0,5:5:12.04:207,12,0
chr10	8143814	.	T	TA	12769.77	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=14.525;DP=641;FS=0.602;HRun=1;HaplotypeScore=91.6823;InbreedingCoeff=0.9996;MQ=93.99;MQ0=0;MQRankSum=-2.788;QD=40.28;ReadPosRankSum=2.373;VQSLOD=5.2049;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:90.26:0,90,1137	1/1:0,13:13:36.12:539,36,0	0/0:34,0:34:99:0,102,1165	0/0:25,0:25:71.99:0,72,876	0/0:29,0:29:78.13:0,78,955	1/1:2,30:32:90.30:1348,90,0	1/1:0,24:24:66.22:983,66,0	1/1:0,48:47:99:2067,144,0	1/1:2,14:16:33.11:494,33,0	0/0:22,0:22:60.19:0,60,767	0/0:16,0:16:48.14:0,48,608	1/1:0,11:11:27.09:404,27,0	1/1:0,17:17:42.14:628,42,0	1/1:0,9:9:27.09:403,27,0	0/0:27,0:27:81.21:0,81,1030	0/0:28,0:28:81.22:0,81,1008	1/1:1,19:20:60.20:883,60,0	0/0:16,0:16:45.14:0,45,577	1/1:0,23:23:69.23:1030,69,0	1/1:1,22:23:63.21:930,63,0	0/0:28,0:28:84.22:0,84,1032	0/0:23,0:23:66.09:0,66,800	0/0:24,0:24:69.22:0,69,882	0/0:22,0:22:66.20:0,66,841	1/1:1,15:16:39.13:583,39,0	1/1:3,22:25:30.30:906,30,0	1/1:0,18:18:45.15:674,45,0	1/1:0,22:22:60.20:897,60,0
chr10	8144324	.	GT	G	11184.14	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=18.598;DP=650;FS=11.335;HRun=6;HaplotypeScore=93.9247;InbreedingCoeff=0.9996;MQ=82.75;MQ0=0;MQRankSum=-2.768;QD=27.82;ReadPosRankSum=4.653;VQSLOD=4.4405;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:42.14:0,42,551	1/1:0,12:12:36.09:387,36,0	0/0:18,0:18:38.95:0,39,549	0/0:18,0:18:44.83:0,45,538	1/1:2,41:43:99:1208,114,0	1/1:0,24:24:66.17:709,66,0	1/1:3,16:19:39.10:419,39,0	1/1:1,22:23:66.16:709,66,0	1/1:2,24:26:63.16:677,63,0	0/0:38,0:38:99:0,108,1409	0/0:22,0:22:57.19:0,57,750	1/1:1,23:24:54.14:580,54,0	1/1:1,30:31:84.21:903,84,0	1/1:2,15:17:45.11:483,45,0	0/0:21,0:21:57.19:0,57,750	1/1:2,25:27:72.18:774,72,0	1/1:0,16:16:42.11:451,42,0	0/0:12,0:12:33.11:0,33,432	1/1:2,15:17:48.11:510,48,0	1/1:1,27:28:75.13:790,75,0	0/0:25,0:25:69.22:0,69,908	0/0:33,0:33:96.30:0,96,1248	0/0:37,0:37:99:0,102,1325	0/0:9,0:9:27.09:0,27,355	1/1:3,20:23:54.13:580,54,0	1/1:3,30:33:53.71:907,54,0	1/1:2,28:30:75.19:806,75,0	1/1:0,9:9:27.07:290,27,0
chr10	8145554	.	CTGTGTGTGTGTGTG	C	9020	PASS	AB=0.653;AC=28;AF=0.519;AN=54;BaseQRankSum=6.845;DP=568;FS=4.573;HRun=0;HaplotypeScore=223.6332;InbreedingCoeff=0.7340;MQ=61.29;MQ0=11;MQRankSum=-8.989;QD=30.78;ReadPosRankSum=2.274;VQSLOD=3.6848;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:33:36.12:0,36,1290	1/1:3,4:7:9.03:354,9,0	./.	0/0:28,0:18:2.93:0,3,66	0/0:17,0:35:13.85:0,14,84	1/1:8,17:26:33.11:1277,33,0	0/1:4,9:13:99:112,0,130	1/1:30,0:30:4.87:125,5,0	1/1:8,15:24:27.09:1001,27,0	0/0:7,0:13:27.09:0,27,733	0/0:13,0:20:24.05:0,24,595	1/1:10,10:20:21.07:826,21,0	1/1:11,17:28:30.10:1138,30,0	1/1:7,6:14:15.05:514,15,0	0/0:10,0:17:21.05:0,21,473	0/0:15,0:26:28.46:0,28,151	1/1:8,0:6:3.01:48,3,0	0/0:13,0:18:23.08:0,23,518	1/1:12,5:16:14.92:453,15,0	1/1:9,17:26:21.07:826,21,0	0/0:22,0:22:20.84:0,21,214	0/0:4,0:14:6.02:0,6,206	0/0:6,0:12:9.02:0,9,231	0/0:9,0:21:17.84:0,18,540	1/1:8,12:20:12.04:430,12,0	1/1:10,14:23:23.02:1216,23,0	1/1:10,11:20:15.05:590,15,0	0/1:9,6:14:19.52:112,0,20
chr10	8145914	.	CTCTT	C	2295.60	PASS	AB=0.765;AC=14;AF=0.280;AN=50;BaseQRankSum=10.525;DP=529;FS=1.162;HRun=0;HaplotypeScore=93.8015;InbreedingCoeff=0.7244;MQ=61.72;MQ0=3;MQRankSum=2.028;QD=14.72;ReadPosRankSum=0.942;VQSLOD=3.3457;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:42.13:0,42,900	0/0:9,0:9:12.04:0,12,284	./.	./.	0/0:28,0:28:57.18:0,57,1245	0/0:21,0:21:42.12:0,42,907	0/0:13,0:13:24.04:0,24,497	0/0:50,0:50:35.82:0,36,439	0/0:15,0:15:27.09:0,27,597	1/1:11,22:33:69.19:998,69,0	1/1:12,16:28:33.11:509,33,0	0/0:15,0:15:30.09:0,30,641	0/0:25,0:25:36.12:0,36,791	0/0:22,0:22:42.13:0,42,945	1/1:2,13:15:15.05:236,15,0	0/0:18,0:18:42.12:0,42,857	0/0:14,0:14:24.04:0,24,474	1/1:8,0:8:1.74:11,2,0	0/0:14,0:14:9.01:0,9,125	0/0:27,0:27:48.11:0,48,903	./.	1/1:6,6:12:12.04:189,12,0	1/1:6,12:18:15.89:280,16,0	0/1:8,12:21:25.06:214,0,25	0/0:19,0:19:33.04:0,33,687	0/1:19,2:21:33.08:33,0,682	0/0:30,0:30:69.20:0,69,1481	0/0:9,0:9:12:0,12,188
chr10	8148167	.	G	GCACACA	14211.33	PASS	AB=0.839;AC=46;AF=0.821;AN=56;BaseQRankSum=-8.580;DP=683;FS=0.640;HRun=0;HaplotypeScore=183.6745;InbreedingCoeff=0.6346;MQ=59.35;MQ0=13;MQRankSum=-0.762;QD=24.98;ReadPosRankSum=-1.027;VQSLOD=4.1819;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:24:59.20:59,0,486	1/1:3,5:10:15.05:489,15,0	0/0:39,0:21:9.03:0,9,171	0/0:26,0:14:2.24:0,2,50	0/0:6,0:28:43.69:0,44,480	1/1:13,2:30:31.09:619,31,0	1/1:17,8:26:11.49:632,11,0	1/1:29,1:33:24.52:483,25,0	1/1:14,10:29:32.29:937,32,0	1/1:16,0:34:49.52:692,50,0	1/1:9,0:26:18.19:254,18,0	1/1:9,8:20:20.26:624,20,0	1/1:10,12:28:42.14:1190,42,0	1/1:3,11:16:27.09:762,27,0	1/1:12,0:23:9.46:149,9,0	0/0:4,0:21:37.20:0,37,437	1/1:11,5:21:18.06:469,18,0	1/1:10,0:22:16.53:281,17,0	1/1:11,6:19:33.06:769,33,0	1/1:10,8:22:8.22:292,8,0	1/1:12,3:17:11.51:170,12,0	1/1:10,9:22:26.95:821,27,0	0/1:10,0:19:45.04:174,0,45	1/1:7,0:22:35.35:461,35,0	1/1:13,14:38:54.18:1347,54,0	1/1:11,9:25:49.03:1192,49,0	1/1:12,13:30:36.59:1050,37,0	1/1:2,1:7:12.04:295,12,0
chr10	8148988	.	TTGCTGCTGCTGCTGC	T	2579.38	PASS	AB=1.000;AC=22;AF=0.458;AN=48;BaseQRankSum=-2.852;DP=503;FS=16.729;HRun=0;HaplotypeScore=241.8960;InbreedingCoeff=0.1947;MQ=54.17;MQ0=6;MQRankSum=-2.247;QD=9.31;ReadPosRankSum=-2.263;VQSLOD=0.9257;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:12.04:0,12,624	0/0:12,0:12:14.33:0,14,104	./.	./.	1/1:15,0:16:0.61:64,1,0	0/1:16,0:16:51.62:52,0,101	0/1:21,0:21:34.01:34,0,352	0/1:29,0:29:0.68:1,0,206	0/0:21,0:21:2.74:0,3,212	1/1:10,3:12:11.99:279,12,0	0/1:17,0:17:18.47:87,0,18	0/1:20,0:20:28.61:29,0,227	0/0:17,0:17:28.41:0,28,183	0/0:15,0:15:10.92:0,11,94	1/1:22,0:22:55.01:991,55,0	0/0:21,0:27:23.32:0,23,150	0/0:16,0:16:8.80:0,9,78	1/1:14,0:14:0.12:254,0,0	0/0:20,0:17:14.39:0,14,186	0/1:18,0:18:98.87:108,0,99	0/1:22,0:22:10.76:109,0,11	./.	1/1:17,5:22:11.99:249,12,0	1/1:22,0:22:26.49:415,26,0	1/1:15,0:15:3.48:43,3,0	./.	0/0:22,0:21:28.37:0,28,215	0/1:10,0:10:23.68:28,0,24
chr10	8148992	.	TGCTGCTGCTGC	T	3006.59	PASS	AB=0.948;AC=21;AF=0.375;AN=56;BaseQRankSum=13.922;DP=477;FS=49.002;HRun=0;HaplotypeScore=189.5170;InbreedingCoeff=-0.4498;MQ=53.51;MQ0=7;MQRankSum=-11.309;QD=8.57;ReadPosRankSum=11.215;VQSLOD=0.3667;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:51.15:0,51,1037	0/1:13,0:13:14.20:14,0,110	0/0:13,0:9:24.08:0,24,305	0/0:11,0:9:27.04:0,27,318	0/1:11,0:12:34.14:34,0,106	0/1:16,0:16:30.80:31,0,113	0/1:24,0:24:24.80:25,0,344	0/0:25,0:24:59.10:0,59,503	0/1:21,0:21:62.54:125,0,63	0/1:11,2:12:99:207,0,133	0/1:15,0:15:13.11:13,0,162	0/1:20,0:20:98.02:98,0,180	0/1:16,0:16:78.87:79,0,82	0/1:15,0:16:50.16:57,0,50	1/1:9,13:22:31.15:1150,31,0	0/1:17,0:27:99:184,0,132	0/0:16,0:16:8.46:0,8,126	0/1:11,2:13:68.11:226,0,68	0/0:19,0:16:22.46:0,22,256	0/1:15,0:15:44.84:45,0,141	0/1:21,0:21:99:126,0,104	0/0:9,0:9:20.54:0,21,126	0/1:16,4:20:73.42:293,0,73	0/1:18,4:22:89.79:362,0,90	0/1:17,0:17:17.21:17,0,108	0/0:10,0:10:23.18:0,23,167	0/1:21,0:20:53.09:53,0,111	0/1:7,0:7:33.64:34,0,105
chr10	8149015	.	CTGCTGCTGCTGT	C	6749.76	PASS	AB=0.996;AC=38;AF=0.679;AN=56;BaseQRankSum=9.925;DP=423;FS=6.056;HRun=0;HaplotypeScore=141.9471;InbreedingCoeff=0.0415;MQ=51.77;MQ0=7;MQRankSum=-8.362;QD=18.24;ReadPosRankSum=9.194;VQSLOD=1.8863;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:45.50:0,46,753	1/1:11,0:11:11.89:172,12,0	0/0:12,0:5:8.20:0,8,145	0/0:14,0:8:21.05:0,21,294	0/1:7,0:7:62.60:63,0,113	1/1:3,16:19:10.96:177,11,0	0/1:21,1:22:71.45:217,0,71	0/1:14,0:13:11.02:240,0,11	1/1:19,1:20:35.96:658,36,0	0/1:12,0:11:99:202,0,146	0/1:9,0:9:36.32:36,0,113	1/1:17,1:18:1.17:447,1,0	1/1:15,0:15:24.08:390,24,0	0/1:19,0:19:6.95:230,0,7	1/1:22,0:22:8.12:1172,8,0	0/1:21,0:21:8.37:253,0,8	1/1:20,0:20:6.02:100,6,0	1/1:10,0:10:0.11:257,0,0	1/1:11,0:10:22.66:201,23,0	1/1:4,12:16:8.69:177,9,0	0/1:19,0:19:99:251,0,135	0/0:6,0:6:6.56:0,7,54	0/1:17,0:17:99:305,0,107	0/1:20,0:20:56.83:479,0,57	1/1:19,0:19:5.52:104,6,0	1/1:5,0:4:12.01:108,12,0	1/1:22,0:21:4.89:376,5,0	1/1:1,1:2:5.99:135,6,0
chr10	8149018	.	CTGCTGCTGT	C	7740.16	PASS	AB=0.953;AC=38;AF=0.679;AN=56;BaseQRankSum=9.275;DP=425;FS=9.069;HRun=0;HaplotypeScore=120.6515;InbreedingCoeff=0.1314;MQ=52.61;MQ0=7;MQRankSum=-8.025;QD=20.98;ReadPosRankSum=8.420;VQSLOD=2.2961;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:48.68:0,49,627	1/1:1,9:10:10.28:280,10,0	0/0:13,0:6:11.17:0,11,140	0/0:15,0:10:27.04:0,27,307	0/1:8,0:8:78.77:79,0,137	1/1:18,1:19:12.04:268,12,0	1/1:2,18:20:12.04:328,12,0	1/1:16,0:15:34.49:258,34,0	1/1:1,20:21:35.95:1040,36,0	0/1:12,0:11:98.08:98,0,163	0/1:10,0:10:7.87:8,0,177	1/1:3,14:17:20.56:686,21,0	1/1:0,14:14:24.08:736,24,0	0/1:2,16:18:6.94:394,0,7	0/1:21,0:21:19.88:578,0,20	0/1:21,0:21:55.43:666,0,55	1/1:2,18:20:6.02:162,6,0	0/1:10,0:10:34.06:88,0,34	1/1:2,8:9:23.92:316,24,0	1/1:16,0:16:11.29:208,11,0	0/1:20,0:20:99:156,0,164	0/0:7,0:7:9.14:0,9,78	0/1:18,0:18:99:135,0,153	0/1:20,0:20:80.07:223,0,80	1/1:1,18:19:5.52:84,6,0	1/1:5,0:4:12.01:108,12,0	1/1:2,20:21:24.86:727,25,0	1/1:2,0:2:6.02:112,6,0
chr10	8149829	.	T	TA	1986.99	PASS	AB=0.745;AC=15;AF=0.268;AN=56;BaseQRankSum=-4.281;DP=454;FS=4.400;HRun=11;HaplotypeScore=56.2234;InbreedingCoeff=0.7255;MQ=61.23;MQ0=4;MQRankSum=3.146;QD=15.05;ReadPosRankSum=1.290;VQSLOD=4.3116;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:29:61.73:0,62,465	0/0:8,0:8:20.92:0,21,162	0/0:16,0:9:4.66:0,5,75	0/1:8,0:6:11.96:12,0,21	0/0:7,0:23:35.20:0,35,107	0/0:11,0:11:20.90:0,21,162	0/0:15,0:15:35.84:0,36,279	0/0:25,0:26:55.78:0,56,423	0/0:15,0:15:29.86:0,30,230	1/1:7,21:29:37.35:580,37,0	0/1:7,6:13:25.43:131,0,25	0/0:18,0:17:31.08:0,31,236	0/0:12,0:12:23.86:0,24,186	0/0:17,0:17:32.86:0,33,255	0/1:2,9:11:2.25:162,0,2	0/0:3,0:7:9.37:0,9,28	0/0:23,0:23:50.75:0,51,390	1/1:6,18:25:48.82:473,49,0	0/0:16,0:15:29.85:0,30,230	0/0:22,0:21:50.74:0,51,392	1/1:0,6:6:12.02:122,12,0	1/1:2,7:9:18:172,18,0	1/1:4,13:17:15.85:342,16,0	1/1:0,12:13:18.04:183,18,0	0/0:18,0:18:19.25:0,19,259	0/0:18,1:19:20.36:0,20,341	0/0:12,0:10:26.90:0,27,209	0/0:7,0:7:17.93:0,18,139
chr10	8149854	.	GA	G	373.87	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.538;DP=477;FS=3.122;HRun=9;HaplotypeScore=68.8290;InbreedingCoeff=0.9327;MQ=64.34;MQ0=0;MQRankSum=-1.502;QD=12.46;ReadPosRankSum=-1.095;VQSLOD=3.2125;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:33:72.03:0,72,797	0/0:12,0:12:27.08:0,27,312	0/0:18,0:15:11.82:0,12,152	0/0:8,0:6:8.57:0,9,79	1/1:3,14:16:39.01:355,39,0	0/0:12,0:12:30.09:0,30,343	0/0:18,0:18:48.14:0,48,551	0/0:26,0:26:69.16:0,69,761	0/0:20,0:20:39.01:0,39,411	0/0:28,0:28:60.17:0,60,684	0/0:6,0:6:15.04:0,15,173	0/0:21,0:20:36.05:0,36,389	0/0:13,0:13:32.98:0,33,352	0/0:17,0:17:39.59:0,40,451	0/0:12,0:12:30.04:0,30,331	1/1:1,12:8:15:137,15,0	0/0:22,0:22:57.14:0,57,642	0/0:18,0:18:42.12:0,42,485	0/0:20,1:20:26.69:0,27,560	0/0:22,0:22:51.13:0,51,571	0/0:13,0:13:33.08:0,33,369	0/0:11,0:11:24.07:0,24,277	0/0:13,0:13:39.12:0,39,450	0/0:19,0:18:33.08:0,33,370	0/0:18,0:18:39.12:0,39,450	0/0:22,0:22:60.18:0,60,692	0/0:16,0:14:33.10:0,33,376	0/0:8,0:8:24.07:0,24,277
chr10	8153457	.	TA	T	7951.77	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-1.389;DP=349;FS=19.204;HRun=8;HaplotypeScore=41.4994;InbreedingCoeff=0.9178;MQ=73.25;MQ0=0;MQRankSum=-0.666;QD=25.82;ReadPosRankSum=3.613;VQSLOD=3.2960;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:26.95:0,27,305	1/1:0,6:6:15.02:145,15,0	0/0:16,0:15:28.68:0,29,289	0/0:16,0:11:16.44:0,16,179	1/1:0,17:17:51.08:493,51,0	1/1:1,12:13:36.06:348,36,0	1/1:1,7:8:15.02:145,15,0	1/1:3,18:21:54.08:521,54,0	1/1:0,7:7:21.03:203,21,0	1/1:2,12:14:36.05:348,36,0	1/1:0,15:15:42.06:404,42,0	1/1:0,9:9:24.04:232,24,0	1/1:0,6:6:18.03:174,18,0	1/1:0,3:3:6.01:58,6,0	1/1:0,5:5:15.02:145,15,0	1/1:1,14:15:42.06:406,42,0	1/1:2,23:25:69.11:666,69,0	1/1:2,18:20:48.08:463,48,0	1/1:0,15:15:45.03:426,45,0	1/1:1,21:22:57.08:549,57,0	1/1:0,5:5:12.02:116,12,0	1/1:1,11:12:33.05:317,33,0	1/1:1,15:16:45.07:434,45,0	1/1:0,7:7:15.02:145,15,0	1/1:0,13:13:39.06:377,39,0	1/1:1,5:6:15.02:145,15,0	1/1:1,16:17:42.07:406,42,0	1/1:0,11:11:30.05:290,30,0
chr10	8180748	.	G	GC	1103.97	PASS	AB=0.902;AC=12;AF=0.214;AN=56;BaseQRankSum=10.305;DP=666;FS=6.644;HRun=0;HaplotypeScore=115.3244;InbreedingCoeff=-0.2582;MQ=66.34;MQ0=6;MQRankSum=-9.232;QD=4.26;ReadPosRankSum=-5.699;VQSLOD=0.9960;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:52:99:0,154,2087	0/0:11,0:11:11.53:0,12,358	0/0:34,0:28:83.71:0,84,1036	0/0:44,1:30:48.98:0,49,728	0/1:19,13:32:99:315,0,590	0/1:22,0:22:48.31:48,0,610	0/1:19,3:22:99:112,0,571	0/0:27,0:29:20.57:0,21,911	0/1:23,0:23:7.06:7,0,678	0/1:28,5:33:99:140,0,1025	0/1:16,0:16:2.35:2,0,523	0/0:22,0:22:22.03:0,22,590	0/0:13,0:13:36.10:0,36,463	0/1:14,5:19:99:176,0,450	0/0:16,0:16:44.64:0,45,584	0/1:15,9:24:99:292,0,516	0/0:24,0:24:66.20:0,66,883	0/1:15,0:15:7.49:7,0,443	0/0:24,0:23:63.12:0,63,820	0/0:31,0:31:90.30:0,90,1248	0/1:13,3:16:63.90:64,0,417	0/0:18,0:18:51.15:0,51,674	0/1:21,0:21:75.80:76,0,628	0/0:17,0:17:21.66:0,22,537	0/1:16,0:16:8.52:9,0,449	0/0:31,0:31:93.20:0,93,1236	0/0:32,0:32:41.43:0,41,1078	0/0:8,0:8:5.78:0,6,222
chr10	8181735	.	TACACACTCAA	T	1280.23	PASS	AB=0.987;AC=19;AF=0.339;AN=56;BaseQRankSum=5.529;DP=686;FS=59.997;HRun=0;HaplotypeScore=208.4658;InbreedingCoeff=-0.0172;MQ=58.30;MQ0=12;MQRankSum=-5.035;QD=4.00;ReadPosRankSum=-0.910;VQSLOD=0.7162;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:83.88:0,84,2200	0/1:17,0:17:13.55:156,0,14	0/0:46,0:25:39.04:0,39,842	0/0:58,0:35:50.71:0,51,1080	0/0:26,0:26:1.02:0,1,2	1/1:21,0:21:3.01:51,3,0	0/1:23,0:22:13.27:13,0,64	0/0:31,0:31:20.76:0,21,118	0/1:32,2:34:29.27:318,0,29	0/1:20,0:20:30.11:77,0,30	0/0:13,0:13:2.75:0,3,6	1/1:13,0:13:6.02:165,6,0	1/1:23,1:23:8.34:178,8,0	0/0:28,0:28:0.47:0,0,1	0/0:15,0:14:3.66:0,4,8	0/1:20,0:20:18.78:38,0,19	0/1:18,0:17:11.97:12,0,30	0/1:16,0:15:13.86:14,0,39	0/1:19,0:19:43.99:44,0,131	0/0:22,0:22:8.62:0,9,70	0/0:50,0:49:19.93:0,20,140	0/0:21,0:22:2.03:0,2,6	0/0:14,0:14:6.88:0,7,45	1/1:21,0:20:1.17:35,1,0	0/1:23,1:24:9.04:36,0,9	0/1:19,0:18:13.30:13,0,55	0/1:30,0:30:5.48:281,0,5	0/0:4,0:4:0.42:0,0,1
chr10	8181742	.	TCAAACACACA	T	5106.13	PASS	AB=0.700;AC=39;AF=0.696;AN=56;BaseQRankSum=-0.477;DP=660;FS=1.025;HRun=0;HaplotypeScore=187.8730;InbreedingCoeff=0.2405;MQ=55.86;MQ0=17;MQRankSum=-0.751;QD=10.01;ReadPosRankSum=4.228;VQSLOD=3.7812;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:88.28:0,88,1939	1/1:1,17:19:4.89:168,5,0	0/0:37,0:19:46.98:0,47,438	0/0:53,0:30:50.72:0,51,551	1/1:1,0:26:2.69:17,3,0	0/1:1,20:21:29.58:55,0,30	1/1:22,0:21:35.42:294,35,0	1/1:30,0:29:73.22:563,73,0	1/1:7,27:33:14.50:331,14,0	1/1:19,0:20:27.06:513,27,0	1/1:13,0:13:26.93:215,27,0	1/1:1,11:12:6.02:189,6,0	1/1:5,20:24:17.39:260,17,0	0/1:3,25:29:2.67:3,0,12	0/1:10,1:14:0.33:91,0,0	1/1:1,0:20:6.08:67,6,0	0/1:2,14:17:15.51:37,0,16	0/1:3,0:14:15.96:43,0,16	1/1:19,0:18:34.46:320,34,0	0/1:3,16:19:10.20:12,0,10	0/1:50,0:47:8.87:474,0,9	0/0:1,0:21:2.03:0,2,6	1/1:7,0:11:16.88:129,17,0	1/1:20,0:20:32.64:290,33,0	0/1:19,3:22:4.79:265,0,5	1/1:16,0:15:40.94:356,41,0	1/1:2,22:27:14.25:360,14,0	0/1:5,0:5:9.89:55,0,10
chr10	8182253	.	G	GC	11614.50	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-2.979;DP=500;FS=13.579;HRun=5;HaplotypeScore=73.4497;InbreedingCoeff=0.9425;MQ=66.39;MQ0=1;MQRankSum=-1.690;QD=25.64;ReadPosRankSum=0.654;VQSLOD=3.3602;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:63.30:0,63,704	1/1:3,8:11:27.02:334,27,0	0/0:9,0:7:14.70:0,15,133	0/0:5,0:4:9.01:0,9,88	1/1:29,0:29:66.03:789,66,0	1/1:2,12:13:35.98:451,36,0	1/1:1,20:21:51.11:649,51,0	1/1:6,16:22:51.11:628,51,0	1/1:5,15:20:44.45:539,44,0	1/1:15,0:16:34.91:349,35,0	1/1:16,1:17:31.64:463,32,0	1/1:0,5:5:15.05:197,15,0	1/1:1,6:7:15.05:196,15,0	1/1:1,13:14:36.12:469,36,0	1/1:23,0:23:18.45:150,18,0	1/1:0,7:7:21.06:254,21,0	1/1:4,13:17:41.64:542,42,0	1/1:2,10:12:33.99:423,34,0	1/1:22,0:22:63.02:675,63,0	1/1:3,19:22:57.12:728,57,0	1/1:4,16:19:33.99:434,34,0	1/1:26,0:26:41.12:571,41,0	1/1:24,0:24:11.50:93,12,0	1/1:28,1:29:19.56:179,20,0	1/1:1,14:15:36.12:473,36,0	1/1:2,25:27:71.99:868,72,0	1/1:3,16:20:52.41:667,52,0	1/1:1,12:13:39.11:493,39,0
chr10	8182255	.	C	CT	4497.39	PASS	AB=1.000;AC=46;AF=0.821;AN=56;BaseQRankSum=2.354;DP=498;FS=14.608;HRun=0;HaplotypeScore=107.3687;InbreedingCoeff=0.4208;MQ=64.22;MQ0=1;MQRankSum=-0.449;QD=9.91;ReadPosRankSum=3.894;VQSLOD=4.5014;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:65.66:0,66,1067	1/1:9,1:10:25.54:159,26,0	0/0:8,0:6:18.05:0,18,232	0/0:4,0:3:9.03:0,9,125	1/1:27,0:27:35.25:355,35,0	1/1:14,1:14:30.28:199,30,0	1/1:20,1:21:47.35:250,47,0	0/1:22,0:22:26.38:161,0,26	1/1:17,2:19:4.83:246,5,0	1/1:15,0:15:3.58:78,4,0	0/1:16,0:16:4.23:212,0,4	1/1:5,0:5:14.25:82,14,0	0/1:8,0:8:7.42:80,0,7	1/1:14,0:14:36.71:225,37,0	1/1:22,0:22:1.19:11,1,0	1/1:7,0:7:19.76:102,20,0	1/1:19,0:19:41.88:244,42,0	1/1:13,0:13:12.88:135,13,0	1/1:22,0:23:30.04:212,30,0	1/1:21,1:22:14.84:259,15,0	1/1:20,0:19:32.34:180,32,0	1/1:25,0:25:16.29:270,16,0	1/1:24,0:24:5.57:37,6,0	0/1:30,0:30:20.24:20,0,37	1/1:15,0:15:10.66:137,11,0	1/1:28,0:28:27.29:328,27,0	1/1:19,1:20:33:271,33,0	1/1:13,1:14:37.45:244,37,0
chr10	8182256	.	C	CCCCTT	15604.57	PASS	AB=0.885;AC=50;AF=0.893;AN=56;BaseQRankSum=-4.447;DP=525;FS=17.702;HRun=0;HaplotypeScore=122.4771;InbreedingCoeff=0.6032;MQ=61.92;MQ0=2;MQRankSum=-0.069;QD=30.36;ReadPosRankSum=-0.270;VQSLOD=3.3962;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:32:99:162,0,610	1/1:11,0:11:33.11:481,33,0	0/0:7,0:5:14.70:0,15,133	0/0:4,0:3:9.01:0,9,88	1/1:0,2:30:71.62:846,72,0	1/1:17,0:16:20.04:583,20,0	1/1:23,0:23:57.19:778,57,0	1/1:21,0:21:51.10:626,51,0	1/1:22,0:22:54.18:806,54,0	1/1:3,12:15:37.31:628,37,0	1/1:3,13:16:45.15:689,45,0	1/1:7,0:7:21.07:315,21,0	1/1:9,0:9:21.07:349,21,0	1/1:15,0:15:42.14:584,42,0	1/1:2,21:23:19.42:567,19,0	1/1:9,0:9:27.09:501,27,0	1/1:20,0:20:18.47:622,18,0	0/1:12,0:13:5.47:250,0,5	1/1:6,18:25:68.99:965,69,0	1/1:25,0:25:63.21:890,63,0	1/1:20,0:19:33:432,33,0	1/1:2,20:24:52.11:827,52,0	1/1:1,22:25:12.34:233,12,0	1/1:4,26:30:17.36:568,17,0	1/1:15,0:15:39.13:548,39,0	1/1:30,0:30:81.15:1062,81,0	1/1:21,0:21:32.16:713,32,0	1/1:15,0:15:42.14:577,42,0
chr10	8185652	.	CT	C	8374.55	PASS	AB=0.583;AC=49;AF=0.875;AN=56;BaseQRankSum=7.228;DP=478;FS=2.842;HRun=9;HaplotypeScore=85.5718;InbreedingCoeff=0.8199;MQ=60.61;MQ0=4;MQRankSum=2.888;QD=20.58;ReadPosRankSum=2.154;VQSLOD=5.5919;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:39,1:40:80.19:0,80,1134	1/1:1,8:9:24.01:220,24,0	0/0:18,0:8:14.62:0,15,133	0/0:12,0:10:12.92:0,13,135	1/1:2,20:21:45.02:410,45,0	1/1:1,14:15:39.02:357,39,0	1/1:3,12:15:33.01:302,33,0	1/1:5,20:22:54.01:489,54,0	1/1:4,14:18:39.01:357,39,0	1/1:5,20:23:56.99:513,57,0	1/1:0,12:11:33.02:302,33,0	1/1:1,7:8:21.01:192,21,0	1/1:0,8:8:21.01:192,21,0	1/1:3,14:17:41.99:377,42,0	1/1:1,10:10:24.01:220,24,0	1/1:1,16:17:39.02:357,39,0	1/1:2,20:22:57.03:521,57,0	1/1:0,5:5:12.01:110,12,0	1/1:4,13:15:33.01:302,33,0	1/1:1,23:24:57.02:521,57,0	1/1:3,9:11:18.01:165,18,0	1/1:2,14:16:36.02:329,36,0	1/1:2,17:19:48.02:439,48,0	0/1:4,10:14:7.58:193,0,8	1/1:1,15:16:39.02:357,39,0	1/1:5,22:27:66.03:603,66,0	1/1:7,16:23:48.02:439,48,0	1/1:5,5:10:12:110,12,0
chr10	8185994	.	CT	C	4609.39	PASS	AB=0.565;AC=43;AF=0.768;AN=56;BaseQRankSum=2.806;DP=297;FS=12.750;HRun=10;HaplotypeScore=34.7895;InbreedingCoeff=0.8660;MQ=60.94;MQ0=1;MQRankSum=2.639;QD=20.31;ReadPosRankSum=-0.558;VQSLOD=4.2037;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:42.05:0,42,449	1/1:0,3:3:6:52,6,0	0/0:8,0:4:9.02:0,9,99	0/0:11,0:10:18.70:0,19,202	0/0:12,0:11:18.05:0,18,199	1/1:0,8:8:21:182,21,0	1/1:0,10:10:24:208,24,0	1/1:8,21:27:56.93:486,57,0	1/1:2,5:7:14.99:130,15,0	1/1:0,14:13:38.99:338,39,0	1/1:0,11:11:26.98:234,27,0	1/1:0,5:5:12:104,12,0	1/1:1,4:5:9:78,9,0	1/1:1,3:4:9:78,9,0	1/1:1,6:7:17.99:156,18,0	0/0:11,0:11:30.08:0,30,332	1/1:4,13:18:41.02:342,41,0	1/1:1,5:6:15:130,15,0	1/1:4,4:7:12:104,12,0	1/1:1,12:13:35.99:313,36,0	0/0:11,0:11:27.07:0,27,299	1/1:1,7:8:23.95:201,24,0	1/1:2,8:10:23.94:201,24,0	1/1:1,18:19:50.99:443,51,0	1/1:0,5:6:14.03:110,14,0	0/1:3,10:13:0.17:224,0,0	1/1:2,14:16:35.99:311,36,0	1/1:0,7:7:21:182,21,0
chr10	8186629	.	TA	T	579.77	PASS	AC=10;AF=1.00;AN=10;DP=589;FS=0.000;HRun=3;HaplotypeScore=16.1167;MQ=6.67;MQ0=522;QD=6.44;VQSLOD=0.1815;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	1/1:4,0:1:2.97:20,3,0	./.	./.	./.	./.	./.	./.	./.	./.	1/1:14,7:6:6.02:74,6,0	./.	./.	./.	./.	./.	./.	./.	./.	1/1:21,9:8:24.08:296,24,0	./.	./.	1/1:13,5:4:9.03:111,9,0	./.	1/1:9,8:7:12.04:148,12,0	./.	./.	./.
chr10	8188633	.	AT	A	10598.42	PASS	AB=0.957;AC=50;AF=0.893;AN=56;BaseQRankSum=2.254;DP=489;FS=6.475;HRun=4;HaplotypeScore=46.6106;InbreedingCoeff=0.7411;MQ=49.75;MQ0=15;MQRankSum=-2.458;QD=22.94;ReadPosRankSum=1.147;VQSLOD=3.5358;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:21,1:22:0.59:1,0,657	1/1:0,5:4:9.03:108,9,0	0/1:22,1:5:6.24:6,0,151	0/0:18,0:9:27.05:0,27,340	1/1:1,26:25:51.15:611,51,0	1/1:1,17:18:45.14:540,45,0	1/1:1,11:11:27.08:324,27,0	1/1:4,16:15:39.09:453,39,0	1/1:1,20:20:51.16:612,51,0	1/1:0,25:23:66.20:790,66,0	1/1:1,18:18:39.12:467,39,0	1/1:0,22:22:45.14:540,45,0	1/1:1,15:16:36.11:432,36,0	1/1:0,12:12:33.10:395,33,0	1/1:0,15:15:30.09:360,30,0	1/1:0,16:16:36.11:432,36,0	1/1:3,19:19:39.12:464,39,0	1/1:2,9:9:24.06:288,24,0	1/1:6,14:16:33.10:396,33,0	1/1:1,17:17:30.09:359,30,0	0/0:9,0:9:27.09:0,27,377	1/1:1,16:15:33.10:396,33,0	1/1:0,23:19:42.13:503,42,0	1/1:0,13:11:24.07:287,24,0	1/1:2,8:9:15.05:180,15,0	1/1:1,20:19:57.17:683,57,0	1/1:3,26:27:69.21:827,69,0	1/1:1,4:5:12.04:144,12,0
chr10	8188794	.	T	TC	14704.83	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=1.676;DP=449;FS=18.437;HRun=0;HaplotypeScore=81.3568;InbreedingCoeff=0.9790;MQ=58.00;MQ0=4;MQRankSum=-1.746;QD=39.96;ReadPosRankSum=3.134;VQSLOD=3.2349;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:69.21:0,69,946	1/1:2,10:12:30.09:456,30,0	0/0:19,0:10:23.17:0,23,308	0/0:22,0:17:47.77:0,48,578	1/1:2,25:27:72.23:1125,72,0	1/1:1,13:14:33.11:526,33,0	1/1:0,10:9:24.08:383,24,0	1/1:2,18:18:51.17:802,51,0	1/1:3,9:12:30.10:475,30,0	1/1:0,22:22:63.21:1007,63,0	1/1:1,25:25:69.23:1100,69,0	1/1:2,6:8:15.04:216,15,0	1/1:0,5:5:15.05:239,15,0	1/1:3,16:19:48.16:749,48,0	1/1:0,15:15:39.13:622,39,0	1/1:1,5:5:12.04:191,12,0	1/1:4,12:16:48.07:700,48,0	1/1:2,9:11:29.31:438,29,0	1/1:1,8:9:27.07:388,27,0	1/1:1,20:21:60.20:944,60,0	0/0:16,0:16:48.16:0,48,671	1/1:1,19:20:57.19:907,57,0	1/1:1,14:15:39.11:596,39,0	1/1:0,8:7:21.07:335,21,0	1/1:0,9:9:24.08:383,24,0	1/1:2,16:17:48.16:768,48,0	1/1:5,25:29:48.06:686,48,0	1/1:0,15:15:42.14:668,42,0
chr10	8188861	.	C	CT	5248.54	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=8.146;DP=365;FS=33.538;HRun=9;HaplotypeScore=93.2870;InbreedingCoeff=0.7997;MQ=44.90;MQ0=8;MQRankSum=-2.140;QD=16.99;ReadPosRankSum=1.639;VQSLOD=3.2870;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:17:41.97:0,42,360	1/1:12,0:12:26.65:181,27,0	0/0:13,0:3:5.99:0,6,52	0/0:11,0:9:20.95:0,21,174	1/1:5,22:25:11.21:578,11,0	1/1:4,0:4:8.93:68,9,0	1/1:6,0:3:2.94:18,3,0	1/1:16,0:10:8.90:61,9,0	1/1:15,0:15:38.48:268,38,0	1/1:6,16:20:42.08:453,42,0	1/1:7,19:25:10.88:545,11,0	1/1:13,0:13:32.62:234,33,0	1/1:3,0:3:5.94:43,6,0	1/1:16,0:15:35.64:266,36,0	1/1:2,2:4:8.98:86,9,0	1/1:1,7:7:18.05:199,18,0	1/1:10,0:9:17.74:117,18,0	1/1:3,3:6:9.02:100,9,0	1/1:7,0:6:11.86:83,12,0	1/1:16,0:15:41.49:286,41,0	0/0:14,0:14:35.99:0,36,313	1/1:3,7:9:15.04:166,15,0	1/1:6,16:20:42.07:451,42,0	1/1:2,7:8:15.04:166,15,0	1/1:18,0:17:44.59:327,45,0	1/1:15,0:13:35:203,35,0	1/1:13,0:13:32.63:235,33,0	1/1:9,0:9:14.93:116,15,0
chr10	8188867	.	T	TA	5882.31	PASS	AB=1.000;AC=42;AF=0.750;AN=56;BaseQRankSum=6.097;DP=340;FS=25.405;HRun=0;HaplotypeScore=76.9991;InbreedingCoeff=0.3788;MQ=44.17;MQ0=7;MQRankSum=-0.256;QD=20.21;ReadPosRankSum=3.740;VQSLOD=3.9403;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:15:45.11:0,45,603	1/1:2,9:10:27.09:378,27,0	0/0:9,0:3:9.01:0,9,107	0/0:9,0:8:23.87:0,24,271	0/1:27,0:25:87.81:135,0,88	1/1:3,3:5:9.03:128,9,0	1/1:1,5:3:3.01:43,3,0	1/1:1,13:7:14.99:173,15,0	1/1:1,15:16:42.13:580,42,0	0/1:22,0:19:64.41:64,0,70	0/1:25,0:22:50.83:119,0,51	1/1:1,11:12:33.10:468,33,0	1/1:0,2:2:6.02:85,6,0	1/1:1,14:14:42.06:553,42,0	0/1:4,0:4:11.16:16,0,11	1/1:9,0:7:14.71:61,15,0	1/1:0,8:7:20.96:266,21,0	1/1:3,0:3:6.99:26,7,0	1/1:2,4:5:14.96:188,15,0	1/1:4,14:16:45.11:604,45,0	0/0:15,0:15:42.04:0,42,541	0/1:9,0:8:11.77:41,0,12	0/1:18,0:16:3.56:70,0,4	1/1:8,0:7:11.47:41,11,0	1/1:1,16:16:45.15:633,45,0	1/1:0,15:13:39.11:539,39,0	1/1:3,10:13:33.11:459,33,0	1/1:2,5:6:15.04:213,15,0
chr10	8188961	.	TC	T	498.62	PASS	AC=4;AF=0.095;AN=42;BaseQRankSum=-3.437;DP=165;FS=30.833;HRun=1;HaplotypeScore=29.4997;InbreedingCoeff=0.3708;MQ=36.32;MQ0=15;MQRankSum=4.576;QD=27.70;ReadPosRankSum=0.550;VQSLOD=1.5964;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:15:30.03:0,30,439	./.	0/0:8,0:7:21.04:0,21,303	0/0:6,0:4:6.02:0,6,78	0/0:9,0:5:6.02:0,6,93	0/0:5,0:4:6.02:0,6,93	0/0:3,0:1:2.92:0,3,17	0/0:6,0:5:12.04:0,12,180	0/0:6,0:4:3.01:0,3,47	0/0:9,0:7:18.06:0,18,274	0/0:10,0:7:12.04:0,12,177	0/0:5,0:4:9.03:0,9,140	./.	0/0:5,0:5:12.04:0,12,186	0/0:4,0:2:3.01:0,3,46	0/0:5,0:3:3.01:0,3,47	./.	1/1:1,1:1:2.50:9,2,0	./.	./.	1/1:0,16:15:42.14:587,42,0	0/0:8,0:6:12.04:0,12,184	0/0:6,0:3:3.01:0,3,47	./.	0/0:5,0:3:6.02:0,6,93	0/0:7,0:4:12.04:0,12,187	0/0:6,0:6:2.69:0,3,46	./.
chr10	8188988	.	T	TC	1449.95	PASS	AC=28;AF=0.875;AN=32;BaseQRankSum=3.314;DP=168;FS=55.397;HRun=5;HaplotypeScore=28.4417;InbreedingCoeff=0.5528;MQ=24.18;MQ0=48;MQRankSum=-4.222;QD=17.68;ReadPosRankSum=0.956;VQSLOD=-0.2433;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:13:12.03:0,12,129	./.	./.	./.	1/1:1,4:4:9.03:112,9,0	1/1:1,5:5:15.05:197,15,0	./.	1/1:3,1:1:3.01:39,3,0	1/1:3,2:3:8.99:99,9,0	1/1:3,6:8:15.05:197,15,0	1/1:0,7:7:12.04:151,12,0	1/1:1,3:4:6.02:79,6,0	./.	1/1:3,5:6:12.04:157,12,0	1/1:0,1:1:3.01:39,3,0	1/1:2,2:4:6.02:79,6,0	./.	./.	1/1:6,3:2:3.01:39,3,0	./.	0/0:24,0:12:30.07:0,30,321	1/1:0,6:6:15.01:177,15,0	1/1:3,6:6:9.03:118,9,0	./.	./.	./.	1/1:2,3:3:6.02:79,6,0	./.
chr10	8196282	.	TCTTGATA	T	1011.78	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.678;DP=512;FS=0.000;HRun=0;HaplotypeScore=120.9059;InbreedingCoeff=0.9639;MQ=61.92;MQ0=0;MQRankSum=-5.946;QD=42.16;ReadPosRankSum=0.311;VQSLOD=3.2398;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,114,4410	0/0:10,0:10:30.10:0,30,1177	0/0:24,0:24:69.21:0,69,2348	0/0:20,0:20:57.20:0,57,2028	1/1:4,11:15:21.07:565,21,0	0/0:12,0:12:36.12:0,36,1424	0/0:24,0:24:72.25:0,72,2846	0/0:29,0:29:84.28:0,84,3094	0/0:19,0:19:54.19:0,54,2172	0/0:22,0:22:66.23:0,66,2602	0/0:19,0:19:51.08:0,51,2014	0/0:20,0:20:60.21:0,60,2286	0/0:21,0:21:60.21:0,60,2433	0/0:12,0:12:36.12:0,36,1419	0/0:20,0:20:48.15:0,48,1863	1/1:1,8:9:21.07:566,21,0	0/0:32,0:32:93.32:0,93,3731	0/0:10,0:10:30.10:0,30,1229	0/0:22,0:22:66.22:0,66,2497	0/0:14,0:14:42.14:0,42,1603	0/0:41,0:41:99:0,120,4610	0/0:13,0:13:39.13:0,39,1524	0/0:17,0:17:51.18:0,51,1945	0/0:14,0:14:36.12:0,36,1470	0/0:4,0:4:9.03:0,9,296	0/0:8,0:8:24.08:0,24,955	0/0:14,0:14:42.14:0,42,1716	0/0:8,0:8:24.08:0,24,924
chr10	8196416	.	GTT	G	2534.71	PASS	AB=0.631;AC=36;AF=0.643;AN=56;BaseQRankSum=-1.427;DP=361;FS=0.534;HRun=16;HaplotypeScore=84.6381;InbreedingCoeff=0.2713;MQ=65.50;MQ0=6;MQRankSum=-2.338;QD=9.42;ReadPosRankSum=-0.337;VQSLOD=1.7298;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,2:29:1.40:0,1,415	1/1:5,3:9:11.67:87,12,0	0/0:18,0:12:5:0,5,144	0/0:14,0:13:4.26:0,4,43	0/0:19,0:19:38.47:0,38,307	1/1:2,4:7:5.92:92,6,0	1/1:4,6:12:3.11:130,3,0	1/1:10,10:20:26.21:224,26,0	0/1:9,0:10:11.12:54,0,11	1/1:4,12:19:17.71:275,18,0	1/1:5,8:15:20.58:161,21,0	1/1:1,5:6:17.95:145,18,0	1/1:3,1:4:5.39:34,5,0	1/1:0,6:6:14.95:125,15,0	1/1:4,4:8:11.85:100,12,0	0/0:4,0:4:11.96:0,12,94	1/1:1,4:6:2.91:66,3,0	0/1:3,4:10:6.20:81,0,6	0/1:16,10:31:3.98:209,0,4	1/1:6,11:19:11.48:170,11,0	0/0:5,0:7:5.97:0,6,58	0/1:5,6:12:18.35:130,0,18	1/1:5,9:16:11.20:128,11,0	1/1:4,2:4:5.97:50,6,0	0/1:3,5:12:13.59:90,0,14	0/1:8,7:16:0.05:129,0,0	0/1:1,11:17:7.34:176,0,7	0/1:1,2:4:0.08:42,0,0
chr10	8196424	.	T	TG	502.28	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-0.991;DP=382;FS=1.955;HRun=0;HaplotypeScore=86.8716;InbreedingCoeff=0.9214;MQ=60.75;MQ0=8;MQRankSum=1.786;QD=22.83;ReadPosRankSum=3.042;VQSLOD=5.2773;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:62.96:0,63,620	0/0:8,0:8:20.84:0,21,150	0/0:16,0:10:26.46:0,26,201	0/0:13,0:11:25.33:0,25,171	1/1:0,18:18:44.49:477,44,0	0/0:7,0:7:20.89:0,21,158	0/0:13,0:13:35.80:0,36,269	0/0:24,0:22:53.28:0,53,399	0/0:10,0:8:20.92:0,21,168	0/0:20,0:19:56.79:0,57,442	0/0:16,0:13:35.78:0,36,266	0/0:9,0:9:26.86:0,27,203	0/0:6,0:6:11.96:0,12,94	0/0:7,0:7:20.88:0,21,154	0/0:10,0:10:29.84:0,30,227	1/1:0,4:4:12.04:141,12,0	0/0:7,0:7:17.89:0,18,133	0/0:8,0:8:23.94:0,24,194	0/0:31,0:29:80.61:0,81,627	0/0:17,0:17:44.78:0,45,341	0/0:7,0:7:14.87:0,15,120	0/0:14,0:12:29.84:0,30,238	0/0:21,0:20:45.86:0,46,321	0/0:7,0:5:11.91:0,12,86	0/0:18,0:18:50.60:0,51,365	0/0:16,0:15:44.11:0,44,351	0/0:18,0:18:44.53:0,45,342	0/0:7,0:7:14.93:0,15,113
chr10	8196656	.	T	TTGTGAAGAG	49372.56	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-1.126;DP=531;FS=4.608;HRun=0;HaplotypeScore=146.1118;InbreedingCoeff=0.9897;MQ=60.56;MQ0=0;MQRankSum=-12.785;QD=108.04;ReadPosRankSum=1.857;VQSLOD=5.7437;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:45.11:0,45,1225	1/1:3,8:13:30.10:1295,30,0	0/0:18,0:16:48.16:0,48,1294	0/0:24,0:24:63.22:0,63,1758	1/1:7,15:23:57.19:2291,57,0	1/1:9,12:22:54.19:2360,54,0	1/1:9,4:13:36.12:1530,36,0	1/1:16,8:26:72.23:2739,72,0	1/1:7,16:24:57.19:2475,57,0	1/1:9,14:24:66.23:3117,66,0	1/1:9,21:31:84.28:3533,84,0	1/1:6,9:15:42.14:1797,42,0	1/1:8,13:25:54.18:2426,54,0	1/1:4,10:16:33:1418,33,0	1/1:3,12:17:45.15:1980,45,0	1/1:3,11:15:42.14:1834,42,0	1/1:4,4:11:18.06:870,18,0	1/1:2,3:7:15.05:539,15,0	1/1:9,9:18:48.16:2119,48,0	1/1:5,6:15:39.13:1341,39,0	0/0:17,0:17:51.18:0,51,1520	1/1:7,13:22:57.19:2382,57,0	1/1:12,23:36:96.19:3980,96,0	1/1:2,5:7:18.03:706,18,0	1/1:4,4:9:24.08:932,24,0	1/1:12,14:27:75.25:3300,75,0	1/1:10,19:29:75.26:3389,75,0	1/1:4,4:9:24.08:1021,24,0
chr10	8197537	.	AATTT	A	818.90	PASS	AB=1.000;AC=29;AF=0.906;AN=32;BaseQRankSum=0.817;DP=183;FS=0.000;HRun=0;HaplotypeScore=34.6097;InbreedingCoeff=0.0425;MQ=74.66;MQ0=6;MQRankSum=-0.320;QD=6.94;ReadPosRankSum=1.883;VQSLOD=0.8576;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:5:6.02:0,6,140	./.	./.	./.	./.	1/1:7,2:9:9.02:118,9,0	./.	1/1:28,0:28:2.97:20,3,0	1/1:0,1:1:3.01:46,3,0	./.	1/1:6,0:6:3.01:40,3,0	1/1:3,1:4:3.01:46,3,0	1/1:1,1:2:3.01:46,3,0	./.	1/1:0,0:1:3:28,3,0	1/1:1,0:2:3:28,3,0	1/1:7,3:10:5.04:91,5,0	0/1:7,0:7:33.48:33,0,58	1/1:13,2:13:6.02:93,6,0	./.	./.	./.	./.	./.	1/1:6,1:7:3.01:46,3,0	1/1:4,1:5:3.01:46,3,0	1/1:5,2:7:6.02:92,6,0	1/1:13,1:14:9.03:139,9,0
chr10	8197607	.	TC	T	6967.36	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=0.724;DP=229;FS=2.241;HRun=2;HaplotypeScore=30.5833;InbreedingCoeff=0.8473;MQ=79.44;MQ0=1;MQRankSum=-2.300;QD=39.81;ReadPosRankSum=1.107;VQSLOD=4.5771;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:36.12:0,36,570	1/1:0,2:2:6.02:84,6,0	0/0:8,0:9:21.07:0,21,336	0/0:12,0:12:33.07:0,33,479	0/0:10,0:10:30.10:0,30,477	1/1:1,11:12:33.05:422,33,0	1/1:0,4:4:9.03:126,9,0	1/1:0,23:23:69.22:949,69,0	1/1:0,3:3:9.03:126,9,0	1/1:0,5:5:15.05:210,15,0	1/1:1,7:8:21.06:277,21,0	1/1:0,4:4:12.04:168,12,0	1/1:0,7:7:21.07:294,21,0	1/1:0,6:6:18.06:250,18,0	1/1:0,2:2:6.02:84,6,0	0/0:5,0:5:12.04:0,12,192	1/1:1,8:8:21.07:288,21,0	1/1:0,6:6:18.06:252,18,0	1/1:0,18:18:54.18:755,54,0	1/1:0,13:13:39.13:543,39,0	0/0:6,0:6:18.06:0,18,286	1/1:0,3:3:3.01:42,3,0	1/1:0,7:7:21.07:294,21,0	1/1:0,1:1:3.01:42,3,0	1/1:0,5:5:15.05:210,15,0	1/1:0,11:11:33.11:462,33,0	1/1:0,13:13:39.13:545,39,0	1/1:0,13:13:39.13:545,39,0
chr10	8197684	.	C	CA	7432.57	PASS	AB=0.786;AC=50;AF=0.893;AN=56;BaseQRankSum=-6.471;DP=317;FS=0.000;HRun=9;HaplotypeScore=36.4284;InbreedingCoeff=0.5962;MQ=75.70;MQ0=0;MQRankSum=-1.432;QD=25.81;ReadPosRankSum=0.876;VQSLOD=4.9688;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:41.99:0,42,364	1/1:0,2:2:6.02:66,6,0	0/0:11,0:13:10.63:0,11,131	0/1:11,0:10:1.11:1,0,110	1/1:1,10:11:30.08:330,30,0	1/1:1,16:17:45.12:498,45,0	1/1:0,3:3:6.02:66,6,0	1/1:4,27:30:55.10:801,55,0	1/1:1,9:10:1.02:239,1,0	1/1:2,12:14:33.07:356,33,0	1/1:2,6:8:18.05:199,18,0	1/1:1,4:5:12.03:133,12,0	1/1:4,5:9:20.85:212,21,0	1/1:3,13:16:45.10:482,45,0	1/1:1,6:7:15.04:166,15,0	1/1:1,7:8:18.05:199,18,0	1/1:4,14:18:48.12:524,48,0	1/1:0,4:4:12.03:131,12,0	1/1:5,8:13:36.09:389,36,0	1/1:4,12:16:39.11:431,39,0	1/1:0,13:13:30.08:332,30,0	1/1:0,9:9:27.07:299,27,0	1/1:3,7:10:24.06:265,24,0	1/1:2,3:5:9.02:100,9,0	0/1:2,6:8:5:178,0,5	1/1:5,10:15:33.08:358,33,0	1/1:4,11:15:33.09:365,33,0	1/1:3,7:10:30.05:311,30,0
chr10	8198115	.	TG	T	20082.37	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=5.215;DP=663;FS=1.476;HRun=3;HaplotypeScore=103.9502;InbreedingCoeff=0.9966;MQ=84.83;MQ0=0;MQRankSum=-7.263;QD=34.39;ReadPosRankSum=5.947;VQSLOD=4.4919;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:84.27:0,84,1175	1/1:0,6:6:18.06:223,18,0	0/0:21,0:21:60.18:0,60,844	0/0:28,0:28:83.69:0,84,1060	1/1:1,33:34:93.22:1133,93,0	1/1:0,25:25:60.19:744,60,0	1/1:0,14:14:39.12:484,39,0	1/1:0,29:29:87.27:1078,87,0	1/1:0,24:24:66.21:818,66,0	1/1:0,31:31:93.29:1153,93,0	1/1:1,23:24:63.08:744,63,0	1/1:0,14:14:36.11:446,36,0	1/1:0,28:28:78.25:965,78,0	1/1:1,20:21:57.18:707,57,0	1/1:0,33:33:87.27:1079,87,0	1/1:3,24:27:66.21:818,66,0	1/1:0,12:12:33.10:409,33,0	1/1:2,18:20:57.18:705,57,0	1/1:0,17:17:51.16:632,51,0	1/1:0,46:46:99:1655,135,0	1/1:0,17:17:51.16:632,51,0	1/1:0,25:25:66.21:818,66,0	1/1:0,31:31:84.22:1024,84,0	1/1:1,9:10:27.08:335,27,0	1/1:0,20:20:60.19:744,60,0	1/1:0,25:25:75.22:916,75,0	1/1:0,35:35:99:1226,99,0	1/1:0,16:16:48.15:595,48,0
chr10	8198797	.	G	GTC	4145.05	PASS	AB=0.973;AC=41;AF=0.788;AN=52;BaseQRankSum=5.658;DP=641;FS=8.731;HRun=0;HaplotypeScore=222.1258;InbreedingCoeff=0.4422;MQ=41.00;MQ0=17;MQRankSum=-1.301;QD=7.56;ReadPosRankSum=3.070;VQSLOD=2.2637;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:23:37.92:0,38,501	1/1:10,0:9:8.55:89,9,0	0/0:16,0:11:20.74:0,21,272	0/0:24,0:13:22.79:0,23,311	1/1:29,2:30:8.98:78,9,0	1/1:20,0:19:11.39:104,11,0	1/1:15,1:14:4.58:15,5,0	1/1:50,4:53:15.29:745,15,0	1/1:23,0:20:8.98:72,9,0	0/1:46,1:42:4.91:577,0,5	./.	1/1:18,0:15:9.02:92,9,0	1/1:20,2:21:2.93:245,3,0	1/1:20,1:22:8.88:106,9,0	0/1:28,0:27:0.11:0,0,0	0/1:17,2:17:26.74:120,0,27	1/1:11,0:9:9.16:71,9,0	1/1:7,0:6:8.97:76,9,0	0/1:23,0:20:13.91:199,0,14	1/1:35,2:34:11.74:110,12,0	./.	1/1:19,2:19:8.70:96,9,0	1/1:31,2:31:11.82:106,12,0	0/1:9,0:9:0.11:0,0,0	1/1:17,1:17:5.48:75,5,0	1/1:33,1:32:33.61:465,34,0	1/1:27,0:25:44.85:403,45,0	1/1:17,0:17:26.94:299,27,0
chr10	8198798	.	T	TCC	7295.41	PASS	AB=0.721;AC=39;AF=0.722;AN=54;BaseQRankSum=2.990;DP=637;FS=4.134;HRun=1;HaplotypeScore=212.9441;InbreedingCoeff=0.2219;MQ=40.47;MQ0=17;MQRankSum=-3.204;QD=12.96;ReadPosRankSum=-0.264;VQSLOD=1.5228;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:23:48.09:0,48,655	1/1:4,7:10:10.37:143,10,0	0/0:14,0:10:22.01:0,22,307	0/0:24,0:13:32.84:0,33,446	1/1:16,15:30:11.74:182,12,0	1/1:11,9:19:21.77:366,22,0	0/1:11,5:14:2.86:25,0,3	0/1:35,18:52:99:958,0,347	1/1:9,13:19:32.80:307,33,0	0/1:26,20:39:99:941,0,143	1/1:10,7:14:11.90:85,12,0	1/1:5,13:15:26.81:272,27,0	0/1:12,9:21:41.18:360,0,41	1/1:9,13:22:17.71:231,18,0	1/1:9,19:27:14.30:99,14,0	0/1:10,9:17:48.31:253,0,48	0/1:7,4:9:7.21:122,0,7	1/1:1,5:6:5.20:89,5,0	0/1:19,4:20:99:203,0,186	1/1:16,20:33:20.78:263,21,0	./.	1/1:11,10:19:11.67:192,12,0	1/1:18,16:33:23.72:271,24,0	0/1:4,5:9:0.11:0,0,0	1/1:9,8:16:16.73:181,17,0	0/1:19,15:32:99:600,0,130	1/1:10,17:25:38.80:621,39,0	1/1:2,15:18:15.20:529,15,0
chr10	8198799	.	CTCTG	C	5898.24	PASS	AB=0.969;AC=40;AF=0.769;AN=52;BaseQRankSum=2.755;DP=637;FS=10.044;HRun=0;HaplotypeScore=226.4563;InbreedingCoeff=0.4026;MQ=40.00;MQ0=18;MQRankSum=-3.379;QD=11.43;ReadPosRankSum=0.664;VQSLOD=3.0664;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:24:38.25:0,38,880	1/1:10,0:9:7.11:103,7,0	0/0:14,0:10:20.72:0,21,355	0/0:23,0:13:22.30:0,22,363	1/1:31,1:30:8.98:78,9,0	1/1:21,0:20:14.85:138,15,0	1/1:15,0:13:5.72:37,6,0	1/1:50,3:52:99:1496,132,0	1/1:21,0:18:9:88,9,0	1/1:43,2:38:19.85:876,20,0	./.	1/1:18,0:15:8.77:108,9,0	0/1:21,1:21:18.28:312,0,18	1/1:21,0:21:8.94:70,9,0	0/0:28,0:27:0.25:0,0,1	0/1:18,0:16:97.46:167,0,97	1/1:10,1:9:12.80:111,13,0	1/1:7,0:6:8.74:134,9,0	0/1:21,2:20:13.80:303,0,14	1/1:37,0:34:11.98:126,12,0	./.	1/1:21,0:19:9.02:98,9,0	1/1:36,0:34:11.82:107,12,0	1/1:7,1:8:0.36:1,0,0	0/1:18,0:16:11.39:68,0,11	1/1:33,0:31:18.60:682,19,0	1/1:28,0:26:15.69:434,16,0	1/1:18,0:18:29.35:362,29,0
chr10	8198801	.	CTG	C	4621.51	PASS	AB=0.953;AC=39;AF=0.750;AN=52;BaseQRankSum=5.514;DP=632;FS=0.000;HRun=0;HaplotypeScore=220.7970;InbreedingCoeff=0.3850;MQ=38.12;MQ0=18;MQRankSum=-5.628;QD=8.97;ReadPosRankSum=2.603;VQSLOD=4.1802;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:25:3.32:0,3,730	0/1:9,1:9:2.26:44,0,2	0/0:14,0:10:23.97:0,24,385	0/0:19,0:10:23.71:0,24,381	1/1:32,0:30:8.35:55,8,0	1/1:17,3:19:14.31:116,14,0	1/1:14,1:13:5.23:56,5,0	1/1:48,4:51:84.32:894,84,0	1/1:21,0:18:9:86,9,0	1/1:42,2:37:49.43:745,49,0	./.	1/1:16,2:15:4.69:48,5,0	0/1:20,1:20:5.44:185,0,5	1/1:15,5:20:8.91:83,9,0	0/0:27,1:27:0.42:0,0,1	0/1:18,0:16:67.82:133,0,68	1/1:11,0:9:12.39:101,12,0	1/1:6,1:6:12.01:148,12,0	1/1:19,3:19:12.83:297,13,0	1/1:38,2:37:11.98:126,12,0	./.	1/1:20,1:19:7.26:46,7,0	1/1:35,2:35:11.12:77,11,0	1/1:7,1:8:0.47:1,0,0	0/1:16,2:16:0.37:9,0,0	1/1:30,4:32:67.25:721,67,0	1/1:26,4:28:39.88:459,40,0	0/1:16,0:16:3.78:196,0,4
chr10	8198803	.	G	GTC	2768.95	PASS	AB=0.934;AC=40;AF=0.769;AN=52;BaseQRankSum=4.886;DP=620;FS=1.302;HRun=0;HaplotypeScore=227.2953;InbreedingCoeff=0.3386;MQ=34.96;MQ0=20;MQRankSum=-4.859;QD=5.14;ReadPosRankSum=2.641;VQSLOD=3.1313;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:23:42.92:0,43,552	1/1:9,1:9:0.37:19,0,0	0/0:11,0:9:18.06:0,18,242	0/0:17,0:8:15.05:0,15,195	1/1:29,0:27:2.99:24,3,0	1/1:18,1:17:4.97:45,5,0	0/1:13,2:13:1.51:2,0,2	1/1:47,4:50:96.05:659,96,0	1/1:10,5:17:2.94:18,3,0	0/1:42,2:37:16.36:362,0,16	./.	1/1:14,3:15:2.98:28,3,0	1/1:16,3:20:12.16:163,12,0	1/1:16,2:20:8.88:131,9,0	0/1:28,1:28:0.10:0,0,0	0/1:16,2:16:58.85:85,0,59	1/1:9,0:9:3.86:23,4,0	1/1:6,1:6:10.21:84,10,0	1/1:11,1:18:17.67:189,18,0	1/1:34,4:37:8.64:99,9,0	./.	1/1:20,3:21:2:46,2,0	1/1:34,2:34:9.01:116,9,0	0/1:8,0:8:0.11:0,0,0	0/1:16,1:16:14.49:19,0,14	1/1:31,3:33:37.49:427,37,0	1/1:29,1:28:20.40:209,20,0	1/1:16,0:16:14.32:167,14,0
chr10	8198805	.	CTCTG	C	3815.22	PASS	AB=0.769;AC=38;AF=0.731;AN=52;BaseQRankSum=5.389;DP=624;FS=4.827;HRun=0;HaplotypeScore=232.9064;InbreedingCoeff=0.2293;MQ=33.22;MQ0=20;MQRankSum=-4.893;QD=7.44;ReadPosRankSum=2.642;VQSLOD=2.1976;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:23:28.51:0,29,806	1/1:6,4:9:3.75:24,4,0	0/0:10,0:8:18.06:0,18,311	0/0:16,0:8:15.05:0,15,248	1/1:15,13:26:2.99:24,3,0	0/1:13,7:18:9.23:71,0,9	1/1:12,3:13:5.47:28,5,0	1/1:41,11:51:60.75:674,61,0	1/1:10,8:15:3.01:36,3,0	1/1:29,17:39:38.08:656,38,0	./.	1/1:9,9:15:2.74:35,3,0	0/1:13,8:20:27.39:195,0,27	1/1:17,3:20:8.94:94,9,0	0/0:19,10:28:0.26:0,0,1	0/1:12,6:16:70.53:139,0,71	1/1:8,2:8:8.96:87,9,0	1/1:6,1:6:12.01:158,12,0	0/1:19,2:18:95.08:177,0,95	1/1:25,16:38:9.02:117,9,0	./.	1/1:16,8:22:3.47:49,3,0	1/1:25,11:34:9.01:117,9,0	1/1:8,0:8:0.36:1,0,0	0/1:11,7:16:13.96:20,0,14	0/1:25,11:34:0.26:511,0,0	1/1:15,15:28:27.25:386,27,0	1/1:6,10:16:15.95:218,16,0
chr10	8198807	.	CTG	C	5955.08	PASS	AB=0.967;AC=43;AF=0.796;AN=54;BaseQRankSum=4.030;DP=619;FS=5.367;HRun=0;HaplotypeScore=216.7688;InbreedingCoeff=0.4322;MQ=32.79;MQ0=20;MQRankSum=-4.822;QD=11.39;ReadPosRankSum=1.783;VQSLOD=4.3322;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:24:42.18:0,42,660	1/1:9,1:9:2.93:52,3,0	0/0:10,0:8:18.05:0,18,283	0/0:12,0:6:15.05:0,15,239	1/1:28,0:26:2.99:24,3,0	0/1:19,1:18:0.51:72,0,1	1/1:13,2:13:5.50:26,5,0	1/1:32,20:51:58.75:1389,59,0	1/1:19,0:16:6:67,6,0	1/1:35,9:37:73.52:1027,74,0	./.	1/1:15,2:14:2.90:42,3,0	1/1:19,1:19:12.17:225,12,0	1/1:22,0:22:11.90:105,12,0	0/0:23,5:27:0.42:0,0,1	0/1:20,0:18:46.50:175,0,47	1/1:9,1:8:8.55:69,9,0	1/1:7,0:6:7.90:126,8,0	1/1:21,0:18:13.27:432,13,0	1/1:36,5:38:9.02:108,9,0	1/1:12,0:9:2.98:22,3,0	1/1:20,3:21:3.01:33,3,0	1/1:30,7:35:11.94:104,12,0	1/1:7,1:8:0.47:1,0,0	0/1:17,1:16:2.15:20,0,2	1/1:26,10:34:85.42:1068,85,0	1/1:22,5:25:43.96:529,44,0	1/1:16,0:16:19.24:240,19,0
chr10	8198809	.	G	GTC	1573.52	PASS	AB=0.977;AC=35;AF=0.648;AN=54;BaseQRankSum=6.467;DP=603;FS=11.278;HRun=0;HaplotypeScore=226.9507;InbreedingCoeff=0.0786;MQ=32.24;MQ0=21;MQRankSum=-0.628;QD=3.03;ReadPosRankSum=-0.110;VQSLOD=1.3562;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:23:19.74:0,20,465	0/1:8,1:8:2.18:2,0,3	0/0:9,0:7:8.99:0,9,101	0/0:9,0:4:6.01:0,6,68	1/1:26,0:24:1.25:3,1,0	0/1:19,1:18:13.80:17,0,14	1/1:15,0:13:2.13:13,2,0	0/1:48,0:47:99:219,0,163	1/1:15,4:16:5.93:41,6,0	0/1:42,1:37:14.14:340,0,14	./.	1/1:16,1:14:2.97:20,3,0	0/1:21,0:20:4.79:84,0,5	1/1:18,2:20:11.39:83,11,0	0/1:24,0:23:0.20:0,0,0	0/1:20,0:18:4.87:101,0,5	1/1:10,0:8:5.73:34,6,0	1/1:6,1:6:4.53:70,5,0	0/1:21,0:18:61.97:62,0,93	1/1:38,3:38:8.16:46,8,0	1/1:12,0:9:2.98:22,3,0	1/1:23,1:22:1.62:13,2,0	1/1:35,1:33:9.33:44,9,0	0/1:7,0:7:0.11:0,0,0	0/0:20,0:18:1.22:0,1,18	0/1:35,1:34:85.85:214,0,86	0/1:27,1:25:3.81:145,0,4	1/1:13,1:14:13.81:145,14,0
chr10	8198851	.	CTCTCTCTTTG	C	6281.83	PASS	AB=1.000;AC=37;AF=0.685;AN=54;BaseQRankSum=-4.633;DP=572;FS=13.963;HRun=0;HaplotypeScore=204.5970;InbreedingCoeff=0.1996;MQ=53.59;MQ0=13;MQRankSum=5.802;QD=14.31;ReadPosRankSum=3.439;VQSLOD=2.8766;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:22:51.50:0,52,866	1/1:9,0:8:11.77:197,12,0	0/0:27,0:16:29.75:0,30,458	0/0:44,0:21:43.74:0,44,467	1/1:17,0:17:24.78:334,25,0	1/1:19,0:18:23.15:312,23,0	1/1:9,0:9:5.59:99,6,0	0/1:19,0:18:33.50:407,0,33	1/1:19,0:15:24.03:304,24,0	0/1:33,0:28:90.76:350,0,91	./.	1/1:23,0:19:20.60:243,21,0	0/1:23,0:23:27.15:359,0,27	0/1:21,0:21:4.84:199,0,5	1/1:24,0:23:25.35:361,25,0	0/1:11,0:10:46.26:177,0,46	1/1:12,0:9:18.05:240,18,0	0/1:4,0:4:1.18:79,0,1	0/1:12,0:11:25.91:174,0,26	0/1:38,0:35:0:0,0,0	1/1:7,0:7:12.02:171,12,0	1/1:23,0:21:1.41:3,1,0	1/1:31,0:27:21.06:312,21,0	0/1:11,0:11:15.59:247,0,16	0/0:18,0:17:1.23:0,1,6	1/1:15,13:27:15.46:714,15,0	1/1:31,0:28:5.02:780,5,0	1/1:15,0:15:0.13:220,0,0
chr10	8198855	.	CTCTTTG	C	7705.32	PASS	AB=0.986;AC=46;AF=0.852;AN=54;BaseQRankSum=-1.369;DP=553;FS=7.874;HRun=0;HaplotypeScore=163.3134;InbreedingCoeff=0.6519;MQ=56.90;MQ0=11;MQRankSum=2.336;QD=17.80;ReadPosRankSum=2.785;VQSLOD=3.6091;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:23:48.12:0,48,734	1/1:9,0:8:17.66:264,18,0	0/0:31,0:20:41.70:0,42,633	0/0:47,0:23:49.24:0,49,506	1/1:15,1:16:27.06:369,27,0	1/1:16,0:15:23.77:306,24,0	1/1:11,0:11:5.93:99,6,0	1/1:21,0:20:42.05:587,42,0	1/1:20,0:16:27.05:413,27,0	1/1:34,0:29:54.73:650,55,0	./.	1/1:20,0:17:20.40:254,20,0	1/1:24,1:25:36.30:617,36,0	1/1:21,0:21:16.68:269,17,0	1/1:21,0:20:26.38:403,26,0	1/1:11,0:10:20.97:265,21,0	1/1:13,0:10:21.06:285,21,0	1/1:4,0:4:5.78:87,6,0	1/1:13,0:12:5.17:264,5,0	0/1:34,1:33:0:1,0,0	1/1:7,0:7:12.02:173,12,0	1/1:23,0:21:0.47:2,0,0	1/1:25,0:21:24.06:353,24,0	0/1:10,0:10:15.27:247,0,15	1/1:17,0:16:2.81:19,3,0	1/1:21,1:23:51.07:676,51,0	1/1:26,0:25:48.17:825,48,0	1/1:10,0:10:16.03:278,16,0
chr10	8198857	.	CTTTG	C	8733.13	PASS	AB=0.743;AC=44;AF=0.815;AN=54;BaseQRankSum=-0.870;DP=534;FS=5.562;HRun=0;HaplotypeScore=139.4544;InbreedingCoeff=0.7061;MQ=58.47;MQ0=8;MQRankSum=1.559;QD=21.94;ReadPosRankSum=2.548;VQSLOD=4.5721;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:21:41.22:0,41,666	1/1:9,0:8:17.99:265,18,0	0/0:32,0:21:44.64:0,45,651	0/0:48,0:24:51.42:0,51,585	1/1:14,1:15:30.09:453,30,0	1/1:11,5:15:24.08:380,24,0	1/1:9,1:11:5.46:99,5,0	1/1:8,13:20:45.92:616,46,0	1/1:17,0:13:27.09:439,27,0	1/1:10,22:28:56.68:660,57,0	./.	1/1:17,2:16:20.72:336,21,0	1/1:25,0:25:53.66:709,54,0	1/1:13,6:19:19.79:287,20,0	1/1:18,2:20:26.49:408,26,0	1/1:9,0:9:17.64:290,18,0	1/1:12,0:11:24.06:329,24,0	1/1:4,0:4:9:108,9,0	1/1:7,3:10:27.01:352,27,0	0/1:9,25:32:0.08:0,0,0	1/1:7,0:7:12.04:196,12,0	1/1:4,18:21:0.47:2,0,0	1/1:19,1:18:30.10:473,30,0	0/1:9,1:10:15.26:271,0,15	0/0:2,14:16:1.01:0,1,2	1/1:18,3:20:51.14:729,51,0	1/1:25,3:26:60.17:956,60,0	1/1:12,0:12:18.48:372,18,0
chr10	8200284	.	T	TCTC	33741.54	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-10.760;DP=681;FS=5.213;HRun=0;HaplotypeScore=77.2975;InbreedingCoeff=0.9995;MQ=80.54;MQ0=0;MQRankSum=-6.288;QD=56.05;ReadPosRankSum=2.759;VQSLOD=7.2488;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,117,1915	1/1:0,13:13:33.11:751,33,0	0/0:22,0:22:57.19:0,57,942	0/0:17,0:17:39.04:0,39,581	1/1:3,24:28:69.15:1515,69,0	1/1:0,25:25:57.20:1304,57,0	1/1:1,18:19:39.13:898,39,0	1/1:2,24:27:78.25:1722,78,0	1/1:6,25:31:78.27:1772,78,0	1/1:6,26:33:87.26:1923,87,0	1/1:0,23:23:60.12:1326,60,0	1/1:1,13:15:35.92:662,36,0	1/1:0,18:20:51.18:1142,51,0	1/1:1,22:23:65.99:1306,66,0	1/1:2,31:34:84.29:1921,84,0	1/1:1,27:28:78.20:1721,78,0	1/1:3,24:27:60.21:1357,60,0	1/1:0,15:15:33.11:761,33,0	1/1:4,11:15:38.67:829,39,0	1/1:1,33:36:99:2287,102,0	1/1:3,20:23:54.19:1219,54,0	1/1:3,33:36:93.32:2111,93,0	1/1:1,20:21:54.19:1243,54,0	1/1:0,17:17:42.14:967,42,0	1/1:0,19:19:42.55:916,43,0	1/1:0,19:21:60.18:1276,60,0	1/1:5,35:41:93.10:2121,93,0	1/1:0,12:12:30.10:691,30,0
chr10	8201022	.	GA	G	1260.88	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.611;DP=564;FS=13.669;HRun=7;HaplotypeScore=56.1620;InbreedingCoeff=0.9689;MQ=78.47;MQ0=0;MQRankSum=-0.061;QD=23.79;ReadPosRankSum=0.396;VQSLOD=2.6731;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:60.18:0,60,740	0/0:8,0:8:18.06:0,18,226	0/0:26,0:24:51.41:0,51,601	0/0:17,0:15:14.10:0,14,260	1/1:1,36:37:99:1016,102,0	0/0:20,0:20:54.16:0,54,666	0/0:8,0:8:24.08:0,24,300	0/0:32,0:32:87.24:0,87,1040	0/0:28,0:28:75.23:0,75,930	0/0:27,0:27:75.23:0,75,931	0/0:27,0:27:75.24:0,75,944	0/0:12,0:12:33.10:0,33,404	0/0:20,0:20:51.15:0,51,629	0/0:15,0:15:45.14:0,45,555	0/0:22,0:22:60.18:0,60,744	1/1:2,14:16:36.08:367,36,0	0/0:24,0:24:60.19:0,60,755	0/0:25,0:25:72.10:0,72,826	0/0:13,0:13:39.11:0,39,479	0/0:27,0:27:81.24:0,81,997	0/0:5,0:5:12.04:0,12,151	0/0:14,0:14:39.12:0,39,489	0/0:23,0:23:69.20:0,69,844	0/0:9,0:9:27.04:0,27,322	0/0:22,0:22:60.18:0,60,743	0/0:26,0:26:75.17:0,75,890	0/0:26,0:26:69.21:0,69,853	0/0:12,0:12:36.09:0,36,426
chr10	8201963	.	T	TA	1081.33	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=-6.394;DP=406;FS=5.086;HRun=10;HaplotypeScore=42.8540;InbreedingCoeff=0.7440;MQ=73.83;MQ0=1;MQRankSum=0.417;QD=20.02;ReadPosRankSum=-0.627;VQSLOD=4.1116;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:20:55.91:0,56,440	0/0:12,0:12:29.45:0,29,220	0/0:13,0:12:25.93:0,26,191	0/1:8,0:6:17.60:18,0,25	1/1:5,34:39:55.85:968,56,0	0/0:14,0:15:35:0,35,277	0/0:4,0:4:11.97:0,12,96	0/0:24,0:24:50.72:0,51,414	0/0:10,0:11:25.99:0,26,199	0/0:18,0:18:38.93:0,39,316	0/0:26,0:27:58.93:0,59,470	0/0:8,0:8:17.84:0,18,139	0/0:10,0:10:29.95:0,30,243	0/0:6,0:6:14.97:0,15,121	0/0:17,0:17:44.91:0,45,366	1/1:0,7:7:21.05:224,21,0	0/0:19,0:19:50.91:0,51,415	0/0:10,0:10:17.96:0,18,148	0/0:13,0:13:32.96:0,33,271	0/0:25,0:26:67.96:0,68,548	0/0:8,0:9:17:0,17,129	0/0:7,0:7:20.98:0,21,172	0/0:14,0:14:38.95:0,39,320	0/0:4,0:4:11.99:0,12,99	0/0:21,0:21:53.88:0,54,439	0/0:14,0:15:37.98:0,38,300	0/0:19,0:19:38.82:0,39,317	0/0:10,0:10:29.91:0,30,240
chr10	8202497	.	TCAGTGC	T	2815.18	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.235;DP=698;FS=4.902;HRun=0;HaplotypeScore=147.2211;InbreedingCoeff=0.9783;MQ=63.50;MQ0=0;MQRankSum=-10.390;QD=45.41;ReadPosRankSum=2.852;VQSLOD=3.4208;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,153,5367	0/0:9,0:8:27.09:0,27,968	0/0:23,0:18:51.18:0,51,1760	0/0:30,0:25:72.24:0,72,2380	1/1:1,28:29:57.20:1402,57,0	0/0:23,0:23:63.22:0,63,2244	0/0:30,0:30:87.30:0,87,3129	0/0:27,0:27:81.28:0,81,2844	0/0:30,0:30:90.31:0,90,3236	0/0:25,0:25:72.25:0,72,2588	0/0:13,0:13:39.13:0,39,1385	0/0:16,0:16:48.14:0,48,1582	0/0:22,0:22:66.23:0,66,2418	0/0:31,0:31:84.29:0,84,3020	0/0:33,0:33:99:0,99,3621	1/1:0,18:18:54.19:1329,54,0	0/0:21,0:21:60.21:0,60,2148	0/0:20,0:20:54.19:0,54,1960	0/0:18,0:18:54.17:0,54,1871	0/0:37,0:37:99:0,111,3970	1/1:3,12:15:9.02:221,9,0	0/0:27,0:27:75.26:0,75,2674	0/0:27,0:27:81.26:0,81,2801	0/0:31,0:31:90.31:0,90,3230	0/0:21,0:21:63.21:0,63,2142	0/0:28,0:28:78.26:0,78,2694	0/0:30,0:30:90.31:0,90,3258	0/0:10,0:10:30.10:0,30,1099
chr10	8202979	.	TA	T	78.15	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=3.770;DP=439;FS=1.700;HRun=6;HaplotypeScore=44.7505;InbreedingCoeff=0.5859;MQ=64.98;MQ0=0;MQRankSum=0.895;QD=5.58;ReadPosRankSum=0.051;VQSLOD=-0.7652;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:51.15:0,51,656	0/0:3,0:3:6.02:0,6,79	0/0:11,0:9:27:0,27,322	0/1:9,0:9:17.17:17,0,88	0/0:21,0:21:57.19:0,57,749	0/0:13,0:13:33.11:0,33,434	0/0:8,0:8:24.08:0,24,316	0/0:33,0:33:90.28:0,90,1160	0/0:15,0:15:42.14:0,42,552	0/0:22,0:22:63.20:0,63,817	0/0:12,0:12:33.02:0,33,411	0/0:13,0:13:36.12:0,36,473	0/0:15,0:15:39.13:0,39,513	0/0:15,0:15:42.14:0,42,552	0/0:13,0:13:39.13:0,39,513	0/0:16,0:16:45.15:0,45,592	0/0:21,0:21:57.09:0,57,712	0/0:21,0:21:57.14:0,57,728	0/0:15,0:15:45.14:0,45,578	0/0:25,0:25:75.23:0,75,972	1/1:0,5:5:15.04:161,15,0	0/0:7,0:7:20.90:0,21,230	0/0:10,0:10:20.97:0,21,239	0/0:7,0:7:21.07:0,21,276	0/0:31,0:30:87.27:0,87,1132	0/0:19,0:19:54.15:0,54,674	0/0:24,0:24:69.18:0,69,856	0/0:17,0:17:48.16:0,48,632
chr10	8203284	.	T	TTG	1198.85	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=3.722;DP=663;FS=1.251;HRun=0;HaplotypeScore=130.9510;InbreedingCoeff=0.8250;MQ=55.88;MQ0=8;MQRankSum=-4.631;QD=5.74;ReadPosRankSum=-2.116;VQSLOD=2.9933;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:46:56.88:0,57,622	0/0:11,0:12:20.89:0,21,217	0/0:21,0:8:6.02:0,6,67	0/0:22,0:12:8.26:0,8,78	1/1:13,16:29:11.37:607,11,0	0/0:17,0:17:30.04:0,30,309	0/0:28,0:31:56.45:0,56,561	0/0:28,0:28:27.03:0,27,290	0/0:19,0:19:33.09:0,33,372	1/1:27,0:26:9.36:77,9,0	1/1:17,0:19:14.99:128,15,0	0/0:19,0:21:47.63:0,48,481	0/0:22,0:23:23:0,23,462	0/0:17,0:17:33.09:0,33,372	1/1:18,1:24:26.93:235,27,0	0/0:26,1:30:16.91:0,17,572	0/0:26,0:26:45.37:0,45,476	1/1:21,0:21:8.91:82,9,0	0/0:22,0:21:6.01:0,6,68	0/0:24,1:26:5.13:0,5,459	1/1:14,0:15:6.01:69,6,0	1/1:20,0:23:6:52,6,0	1/1:20,0:25:5.76:52,6,0	1/1:24,0:26:11.74:89,12,0	0/0:24,0:25:41.93:0,42,442	0/0:39,0:39:16.91:0,17,657	0/0:18,0:21:35.60:0,36,346	0/0:4,0:3:3.01:0,3,34
chr10	8204253	.	CT	C	12047.75	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=12.054;DP=708;FS=1.084;HRun=9;HaplotypeScore=74.5423;InbreedingCoeff=0.9856;MQ=78.34;MQ0=0;MQRankSum=-3.762;QD=22.90;ReadPosRankSum=1.351;VQSLOD=5.6877;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,141,1607	1/1:4,6:10:14.95:129,15,0	0/0:18,1:18:16.23:0,16,399	0/0:24,0:23:12.77:0,13,366	0/0:32,0:32:90.24:0,90,1018	1/1:4,14:18:35.97:321,36,0	1/1:2,26:28:61.59:553,62,0	1/1:3,29:32:86.99:784,87,0	1/1:3,20:23:54.03:494,54,0	1/1:0,26:26:78.02:707,78,0	1/1:6,15:21:39.02:357,39,0	1/1:2,32:34:87.04:796,87,0	1/1:1,17:18:51.03:467,51,0	1/1:0,20:20:60.03:549,60,0	1/1:4,26:30:72.03:659,72,0	0/0:26,0:26:72.21:0,72,831	1/1:4,38:42:99:988,108,0	1/1:0,20:20:54.03:494,54,0	1/1:4,16:20:48.01:439,48,0	1/1:2,18:20:51.02:466,51,0	0/0:30,0:30:84.22:0,84,943	1/1:2,28:30:84.04:769,84,0	1/1:2,21:23:59.68:549,60,0	1/1:3,27:30:75.04:686,75,0	1/1:2,18:20:51.02:467,51,0	1/1:4,26:31:80.06:714,80,0	1/1:2,22:24:57.03:522,57,0	1/1:0,6:6:15.01:137,15,0
chr10	8204832	.	T	TA	6669.28	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-9.833;DP=601;FS=0.000;HRun=6;HaplotypeScore=57.8122;InbreedingCoeff=0.9997;MQ=70.30;MQ0=1;MQRankSum=-1.387;QD=32.22;ReadPosRankSum=3.387;VQSLOD=5.1117;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:75.17:0,75,765	0/0:10,0:10:30.04:0,30,292	0/0:25,0:24:59.31:0,59,621	0/0:16,0:15:28.87:0,29,276	1/1:1,28:29:78.25:981,78,0	0/0:20,0:20:54.10:0,54,543	0/0:16,0:16:42.09:0,42,428	0/0:30,0:30:84.15:0,84,832	0/0:25,0:25:75.16:0,75,758	1/1:2,27:29:78.25:979,78,0	1/1:4,17:21:51.16:642,51,0	0/0:23,0:23:66.14:0,66,668	0/0:20,0:20:54.12:0,54,551	0/0:22,0:22:60.12:0,60,604	1/1:1,14:15:42.13:528,42,0	1/1:1,13:14:33.11:415,33,0	0/0:24,0:24:60.06:0,60,587	1/1:0,20:20:54.17:679,54,0	0/0:21,0:21:54.09:0,54,537	0/0:26,0:26:59.23:0,59,741	1/1:2,15:17:45.14:566,45,0	1/1:2,14:16:42.13:528,42,0	1/1:5,17:22:51.08:633,51,0	1/1:1,23:24:57.18:717,57,0	0/0:25,0:25:75.14:0,75,749	0/0:26,0:26:69.15:0,69,704	0/0:28,0:28:81.17:0,81,821	0/0:11,0:11:30.07:0,30,306
chr10	8205366	.	CG	C	5811.68	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=17.546;DP=624;FS=6.753;HRun=1;HaplotypeScore=102.6914;InbreedingCoeff=0.9678;MQ=82.11;MQ0=1;MQRankSum=-6.611;QD=39.27;ReadPosRankSum=4.167;VQSLOD=4.8649;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,105,1599	0/0:7,0:7:21.07:0,21,335	0/0:37,0:35:76.07:0,76,1346	0/0:40,0:36:73.83:0,74,1374	0/0:27,0:27:81.26:0,81,1262	0/0:28,0:28:81.28:0,81,1289	0/0:24,0:24:72.23:0,72,1120	0/0:26,0:26:78.18:0,78,1167	0/0:20,0:20:60.20:0,60,957	1/1:0,25:25:72.24:1002,72,0	1/1:0,11:11:30.10:418,30,0	0/0:16,0:16:48.15:0,48,738	0/0:22,0:23:60.89:0,61,997	0/0:16,0:16:48.16:0,48,761	1/1:0,31:31:87.28:1213,87,0	0/0:17,0:17:51.17:0,51,810	0/0:23,0:23:69.21:0,69,1061	1/1:0,14:14:39.13:545,39,0	0/0:23,0:23:69.20:0,69,1051	0/0:18,0:18:54.18:0,54,852	0/0:25,0:25:69.24:0,69,1096	1/1:0,25:25:72.24:1003,72,0	1/1:0,19:19:54.18:752,54,0	1/1:0,23:23:63.21:879,63,0	0/0:21,0:21:63.21:0,63,1005	0/0:23,1:24:27.31:0,27,962	0/0:22,0:22:63.09:0,63,943	0/0:2,0:2:2.99:0,3,24
chr10	8205502	.	A	AT	971.74	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-2.824;DP=654;FS=4.323;HRun=8;HaplotypeScore=100.9889;InbreedingCoeff=0.9900;MQ=85.08;MQ0=0;MQRankSum=-3.050;QD=26.26;ReadPosRankSum=2.122;VQSLOD=3.7931;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,105,961	0/0:13,0:13:39.02:0,39,357	0/0:22,0:22:42.60:0,43,351	0/0:22,0:22:46.26:0,46,331	1/1:2,18:20:51.11:574,51,0	0/0:29,0:29:71.75:0,72,654	0/0:18,0:18:44.99:0,45,402	0/0:27,0:27:63.01:0,63,574	0/0:27,1:28:31.39:0,31,541	0/0:32,0:32:87.02:0,87,788	0/0:29,0:29:78.04:0,78,714	0/0:19,0:19:54.01:0,54,491	0/0:14,0:14:39.01:0,39,352	0/0:18,0:18:51.02:0,51,466	0/0:33,0:33:84.02:0,84,769	1/1:2,15:17:45.13:519,45,0	0/0:22,0:22:57.01:0,57,516	0/0:21,0:20:63.02:0,63,572	0/0:23,0:23:44.98:0,45,405	0/0:21,0:21:51.03:0,51,467	0/0:23,0:23:63.03:0,63,576	0/0:19,0:19:51.01:0,51,461	0/0:28,0:28:75.04:0,75,686	0/0:26,0:26:63:0,63,571	0/0:26,0:26:78.01:0,78,703	0/0:25,0:25:71.06:0,71,634	0/0:29,0:29:68.98:0,69,621	0/0:10,0:10:14.26:0,14,136
chr10	8205577	.	T	TTGTG	4244.06	PASS	AB=0.846;AC=42;AF=0.840;AN=50;BaseQRankSum=-1.095;DP=656;FS=0.000;HRun=0;HaplotypeScore=140.3576;InbreedingCoeff=0.1471;MQ=66.13;MQ0=11;MQRankSum=-1.242;QD=8.32;ReadPosRankSum=-1.784;VQSLOD=3.7770;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:34:8.22:0,8,61	1/1:6,1:8:5.75:82,6,0	./.	./.	0/0:15,0:17:3:0,3,26	0/1:25,3:31:34.32:106,0,34	0/1:15,6:26:25.54:274,0,26	1/1:36,0:34:8.94:74,9,0	1/1:21,1:22:18.06:302,18,0	1/1:30,0:30:12.04:202,12,0	1/1:24,0:24:15.05:298,15,0	1/1:13,7:21:8.77:152,9,0	1/1:19,0:19:9.01:136,9,0	1/1:20,0:22:17.20:300,17,0	1/1:28,0:28:21.07:426,21,0	0/1:10,0:12:33.08:33,0,37	1/1:19,7:27:12.49:234,12,0	1/1:14,0:13:3.01:69,3,0	1/1:16,2:18:12.51:260,13,0	0/1:13,2:16:40.37:64,0,40	./.	1/1:25,0:25:18.06:314,18,0	1/1:14,0:14:10.31:158,10,0	1/1:28,0:28:18.95:348,19,0	1/1:24,6:30:3.01:70,3,0	1/1:31,0:30:18.99:235,19,0	1/1:20,2:22:3.01:70,3,0	1/1:3,0:3:3.01:37,3,0
chr10	8205611	.	G	GTGTA	3071.90	PASS	AB=0.888;AC=22;AF=0.393;AN=56;BaseQRankSum=6.138;DP=625;FS=2.141;HRun=0;HaplotypeScore=121.3852;InbreedingCoeff=-0.1829;MQ=55.37;MQ0=15;MQRankSum=1.196;QD=7.62;ReadPosRankSum=7.380;VQSLOD=1.4655;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:49:96.68:0,97,809	0/1:6,0:6:35.69:36,0,40	0/0:21,0:5:8.89:0,9,76	0/0:25,0:12:29.99:0,30,284	0/0:20,0:20:44.90:0,45,370	0/1:28,0:28:0.08:0,0,324	0/1:29,0:29:83.47:83,0,316	0/0:31,0:29:77.39:0,77,604	0/1:17,0:17:99:114,0,165	1/1:4,18:23:29.79:470,30,0	0/1:3,16:19:21.87:377,0,22	0/1:21,0:20:62.52:63,0,135	0/1:14,0:14:36.50:37,0,140	0/1:17,0:17:92.36:98,0,92	1/1:1,23:27:21.07:557,21,0	0/0:17,0:17:26.77:0,27,339	0/1:26,0:26:99:112,0,161	0/1:3,14:18:16.02:66,0,16	0/1:17,0:16:4.54:5,0,199	0/1:14,0:14:28.11:28,0,133	0/0:33,0:32:53.77:0,54,425	0/1:7,17:30:57.18:402,0,57	1/1:4,3:27:9.38:282,9,0	0/1:7,24:35:22.74:479,0,23	0/1:18,0:17:8.17:8,0,240	0/0:23,0:21:6.86:0,7,313	0/1:16,0:16:26.07:26,0,141	0/0:2,0:2:5.94:0,6,42
chr10	8207035	.	G	GTC	714.82	PASS	AB=0.856;AC=8;AF=0.154;AN=52;BaseQRankSum=7.817;DP=581;FS=28.555;HRun=0;HaplotypeScore=120.6897;InbreedingCoeff=-0.1737;MQ=49.93;MQ0=26;MQRankSum=1.897;QD=4.13;ReadPosRankSum=-2.905;VQSLOD=0.8378;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:27:59.90:0,60,779	0/0:12,0:12:30.10:0,30,394	./.	./.	0/1:24,8:31:99:135,0,318	0/0:22,0:21:60.11:0,60,782	0/0:27,0:27:48.15:0,48,637	0/0:37,0:23:57.13:0,57,699	0/0:22,0:22:48.16:0,48,638	0/1:19,4:18:99:113,0,380	0/0:22,2:22:21.05:0,21,278	0/0:13,0:13:36.12:0,36,479	0/0:19,0:19:54.08:0,54,677	0/0:16,0:14:39.13:0,39,518	0/0:12,2:13:18.06:0,18,240	0/1:7,5:12:99:203,0,130	0/0:28,0:28:66.67:0,67,865	0/1:18,2:17:99:133,0,184	0/0:18,0:14:36.11:0,36,464	0/0:22,0:22:48.09:0,48,616	0/1:19,2:20:72.79:73,0,215	0/1:17,3:18:75.20:75,0,215	0/1:18,3:20:99:109,0,175	0/1:22,2:22:3.10:3,0,212	0/0:20,0:19:45.15:0,45,589	0/0:26,0:26:60.13:0,60,775	0/0:26,0:26:72.24:0,72,952	0/0:24,0:24:60.13:0,60,745
chr10	8207099	.	CTCTCTG	C	1021.23	PASS	AB=1.000;AC=16;AF=0.296;AN=54;BaseQRankSum=1.404;DP=577;FS=0.575;HRun=0;HaplotypeScore=146.9512;InbreedingCoeff=0.6966;MQ=47.62;MQ0=28;MQRankSum=-0.920;QD=6.30;ReadPosRankSum=-3.477;VQSLOD=1.7843;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:29:40.79:0,41,1046	0/0:8,0:8:21.04:0,21,496	./.	0/0:26,0:4:4.58:0,5,20	1/1:19,0:17:13.17:89,13,0	0/0:13,0:13:18.01:0,18,295	0/0:23,0:21:38.61:0,39,666	0/0:36,0:29:74.89:0,75,843	0/0:20,0:20:39.52:0,40,720	1/1:14,0:13:24.02:282,24,0	0/0:3,17:19:2.03:0,2,6	0/0:16,0:16:36.45:0,36,1079	0/0:18,0:18:26.27:0,26,560	0/0:24,0:22:42.54:0,43,941	1/1:20,0:17:18.92:151,19,0	0/1:16,0:15:21.76:22,0,43	0/0:36,0:34:55.77:0,56,1414	0/1:25,0:19:99:189,0,225	0/0:19,0:14:5.13:0,5,329	0/0:23,0:23:39.10:0,39,1102	1/1:13,0:11:3:25,3,0	1/1:19,0:17:17.98:190,18,0	1/1:17,1:16:11.95:140,12,0	1/1:18,0:15:9.13:118,9,0	0/0:18,0:18:26.28:0,26,602	0/0:21,0:21:25.68:0,26,1012	0/0:40,0:38:63.50:0,63,1313	0/0:7,0:7:11.97:0,12,132
chr10	8207103	.	CTG	C	997.93	PASS	AB=1.000;AC=18;AF=0.333;AN=54;BaseQRankSum=4.772;DP=570;FS=10.221;HRun=0;HaplotypeScore=127.1441;InbreedingCoeff=0.5755;MQ=46.37;MQ0=31;MQRankSum=0.123;QD=5.04;ReadPosRankSum=-3.527;VQSLOD=1.5269;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,1:30:38.88:0,39,553	0/0:8,0:8:21.04:0,21,290	./.	0/0:21,0:4:0.01:0,0,5	1/1:20,1:19:17.35:128,17,0	0/0:12,0:12:14.97:0,15,155	0/0:21,3:22:23.75:0,24,395	0/0:37,0:29:83.25:0,83,678	0/0:23,0:22:24.99:0,25,455	1/1:13,0:12:32.85:275,33,0	0/0:19,0:18:2.03:0,2,6	0/1:18,0:17:2.54:3,0,527	0/0:17,0:17:26.24:0,26,310	0/0:26,0:23:38.81:0,39,493	1/1:19,0:16:17.95:150,18,0	0/1:15,0:14:10.03:98,0,10	0/0:36,0:34:34.48:0,34,668	0/1:25,0:19:94.58:148,0,95	0/0:20,0:14:8.84:0,9,242	0/0:23,0:23:39.10:0,39,610	1/1:15,0:13:3:25,3,0	1/1:19,0:17:17.97:154,18,0	1/1:17,0:15:11.94:99,12,0	1/1:18,0:15:9:82,9,0	0/1:18,0:18:17.51:18,0,281	0/0:19,0:19:8.28:0,8,499	0/0:40,0:38:33.63:0,34,649	0/0:6,0:6:11.95:0,12,92
chr10	8207129	.	C	CTG	2037.17	PASS	AB=0.857;AC=38;AF=0.731;AN=52;BaseQRankSum=1.689;DP=540;FS=0.783;HRun=0;HaplotypeScore=129.0809;InbreedingCoeff=-0.1747;MQ=44.54;MQ0=28;MQRankSum=-0.193;QD=4.12;ReadPosRankSum=-1.790;VQSLOD=2.8038;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:27:17.83:0,18,154	1/1:5,4:8:3.01:46,3,0	0/1:3,0:3:10.01:10,0,10	./.	1/1:24,0:22:14.48:112,14,0	0/1:6,4:10:36.89:40,0,37	1/1:26,0:24:22.14:237,22,0	0/1:29,0:18:25.47:54,0,25	0/1:22,0:20:17.69:271,0,18	1/1:14,0:13:27.15:189,27,0	1/1:24,0:23:5.94:41,6,0	0/1:21,0:20:7.38:199,0,7	0/1:8,8:16:20.84:39,0,21	1/1:16,10:23:2.61:46,3,0	1/1:18,0:16:5.39:47,5,0	0/1:16,0:15:15.79:84,0,16	0/1:27,10:34:24.68:77,0,25	1/1:21,0:16:14.86:114,15,0	0/1:19,1:14:2.11:2,0,40	0/1:21,11:32:71.68:72,0,101	./.	1/1:21,0:18:2.99:23,3,0	1/1:13,0:12:2.94:18,3,0	1/1:15,0:11:2.77:23,3,0	0/1:11,7:18:0:0,0,0	1/1:11,10:21:0.94:263,1,0	0/1:19,14:31:21.04:121,0,21	1/1:2,3:6:5.05:52,5,0
chr10	8209335	.	AAAT	A	2386.55	PASS	AB=1.000;AC=25;AF=0.568;AN=44;BaseQRankSum=7.516;DP=223;FS=14.623;HRun=0;HaplotypeScore=38.4634;InbreedingCoeff=0.6133;MQ=77.64;MQ0=0;MQRankSum=-0.822;QD=16.24;ReadPosRankSum=0.143;VQSLOD=1.5724;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:22.32:0,22,413	1/1:0,0:4:8.93:63,9,0	./.	./.	0/0:2,0:3:3.01:0,3,39	1/1:10,0:18:26.30:177,26,0	./.	1/1:19,13:32:39.10:481,39,0	./.	0/0:6,0:6:9.03:0,9,176	0/0:3,0:3:6.02:0,6,117	1/1:4,0:6:5.95:42,6,0	1/1:5,0:6:2.98:21,3,0	1/1:2,0:3:2.98:21,3,0	0/0:5,0:5:9.03:0,9,165	0/0:5,0:5:3.01:0,3,44	1/1:6,20:26:51.17:688,51,0	0/1:13,0:13:13.31:13,0,416	./.	1/1:1,0:3:5.95:42,6,0	0/0:4,0:4:0.47:0,0,1	./.	0/0:6,0:6:15.04:0,15,245	0/0:2,0:2:3.01:0,3,59	1/1:1,0:7:17.86:126,18,0	1/1:3,3:6:9.03:122,9,0	1/1:1,5:6:12.04:162,12,0	1/1:0,16:17:45.11:588,45,0
chr10	8209801	.	GAGCAATGTCATCTCAGA	G	679.53	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.096;DP=688;FS=3.701;HRun=0;HaplotypeScore=298.6418;InbreedingCoeff=0.9803;MQ=94.36;MQ0=0;MQRankSum=-2.815;QD=56.63;ReadPosRankSum=-0.435;VQSLOD=2.6299;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,135,9990	0/0:8,0:8:24.08:0,24,1857	0/0:36,0:36:99:0,108,6316	0/0:33,0:30:72.40:0,72,4194	0/0:28,0:28:84.29:0,84,6593	0/0:23,0:23:66.23:0,66,5414	0/0:24,0:24:72.25:0,72,6076	0/0:32,0:32:96.33:0,96,7061	0/0:21,0:21:60.21:0,60,5109	0/0:34,0:34:99:0,102,8072	0/0:17,0:17:51.18:0,51,4146	0/0:34,0:34:99:0,102,7728	0/0:28,0:28:84.29:0,84,6843	0/0:30,0:30:87.30:0,87,6666	0/0:27,0:27:81.25:0,81,5395	0/0:19,0:19:57.20:0,57,4506	0/0:31,0:31:93.29:0,93,7025	0/0:22,0:22:66.23:0,66,5375	0/0:17,0:17:48.14:0,48,3056	0/0:31,0:31:93.32:0,93,7850	1/1:0,12:12:14.88:768,15,0	0/0:13,0:13:39.13:0,39,2922	0/0:18,0:18:51.17:0,51,4251	0/0:16,0:16:48.16:0,48,3564	0/0:22,0:22:66.23:0,66,4842	0/0:24,0:24:72.25:0,72,5530	0/0:33,0:33:99:0,99,7935	0/0:9,0:9:27.09:0,27,2258
chr10	8212233	.	AGTGTGTGTGTGT	A	2401.95	PASS	AB=0.696;AC=14;AF=0.250;AN=56;BaseQRankSum=4.269;DP=642;FS=4.711;HRun=0;HaplotypeScore=208.5671;InbreedingCoeff=0.6669;MQ=68.09;MQ0=11;MQRankSum=-4.975;QD=13.57;ReadPosRankSum=0.192;VQSLOD=2.1447;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:38:55.05:0,55,2603	0/0:7,0:10:12.50:0,12,425	0/0:29,0:23:3.01:0,3,71	0/0:37,0:22:3.01:0,3,33	0/0:19,0:26:36.09:0,36,714	0/0:17,0:27:14.53:0,15,633	0/0:24,0:25:39.13:0,39,1749	0/0:28,0:28:24.08:0,24,854	0/0:14,0:20:21.94:0,22,948	1/1:19,6:24:18.02:372,18,0	1/1:13,9:22:18.02:499,18,0	0/0:17,0:23:15.05:0,15,637	0/0:18,0:23:21.07:0,21,965	0/0:22,0:20:12.04:0,12,535	1/1:16,8:23:20.18:590,20,0	0/1:15,0:22:18.11:18,0,298	0/0:17,0:28:21.07:0,21,1104	1/1:9,3:12:9.03:287,9,0	0/0:15,0:17:17.42:0,17,679	0/0:16,0:20:8.99:0,9,235	0/0:9,0:12:7.27:0,7,295	1/1:15,9:24:15:330,15,0	1/1:14,6:21:4.54:110,5,0	0/1:12,14:26:50.41:374,0,50	0/0:13,0:14:18.05:0,18,835	0/0:21,0:27:30.09:0,30,1477	0/0:24,0:25:45.12:0,45,1812	0/0:4,0:10:18.06:0,18,939
chr10	8213108	.	CCTCTCTCTCTCTCT	C	1263.63	PASS	AB=0.871;AC=22;AF=0.550;AN=40;BaseQRankSum=-0.984;DP=375;FS=3.074;HRun=0;HaplotypeScore=122.8862;InbreedingCoeff=0.4583;MQ=54.53;MQ0=33;MQRankSum=0.280;QD=7.85;ReadPosRankSum=2.753;VQSLOD=2.0928;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:16.47:0,16,494	./.	./.	./.	0/1:15,1:20:5.39:63,0,5	1/1:11,1:12:3.01:109,3,0	1/1:13,0:11:6:97,6,0	0/0:12,0:11:3.39:0,3,9	./.	0/0:13,0:13:11.52:0,12,205	0/0:12,0:12:11.25:0,11,212	1/1:11,1:10:2.95:38,3,0	./.	1/1:5,1:5:3.01:94,3,0	0/0:12,0:11:6.90:0,7,67	1/1:8,2:9:3.01:114,3,0	1/1:12,1:10:9.03:215,9,0	0/0:12,0:9:10.28:0,10,265	1/1:15,0:14:1.68:108,2,0	0/0:9,1:11:0.47:0,0,1	0/0:12,0:11:3.01:0,3,152	0/1:11,0:10:1.09:1,0,98	./.	1/1:13,1:12:0.01:0,0,0	./.	1/1:16,2:16:19.88:445,20,0	1/1:10,2:11:3.01:112,3,0	./.
chr10	8213162	.	TCACACACACACA	T	1312.16	PASS	AB=0.861;AC=22;AF=0.524;AN=42;BaseQRankSum=2.380;DP=375;FS=0.000;HRun=0;HaplotypeScore=119.1926;InbreedingCoeff=0.0910;MQ=32.58;MQ0=61;MQRankSum=0.074;QD=7.21;ReadPosRankSum=0.517;VQSLOD=2.1911;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:22:14.99:0,15,489	1/1:4,0:2:3.01:41,3,0	./.	./.	./.	1/1:16,0:12:1.63:27,2,0	1/1:17,0:12:1.70:66,2,0	0/0:19,0:16:0:0,0,0	1/1:12,6:18:3.01:89,3,0	1/1:10,0:10:3.01:84,3,0	0/0:16,0:16:0:0,0,0	./.	0/0:5,0:2:0.47:0,0,1	1/1:5,0:7:2.46:71,2,0	./.	0/0:11,0:10:0.47:0,0,1	1/1:11,0:12:1.39:65,1,0	./.	0/1:8,0:11:25.59:185,0,26	0/1:9,1:8:9.94:119,0,10	0/1:19,0:12:9.41:21,0,9	./.	0/0:10,0:13:0.94:0,1,2	0/0:17,0:14:0.47:0,0,1	1/1:13,0:13:2.68:63,3,0	1/1:9,3:12:11.73:331,12,0	0/1:18,1:21:99:259,0,112	0/0:6,0:1:3.01:0,3,115
chr10	8213229	.	T	TA	3127.93	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-5.156;DP=442;FS=1.477;HRun=8;HaplotypeScore=78.3156;InbreedingCoeff=0.9666;MQ=70.48;MQ0=5;MQRankSum=-0.583;QD=22.50;ReadPosRankSum=-0.596;VQSLOD=3.9191;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:48:0,48,430	0/0:9,0:9:27.01:0,27,247	0/0:28,0:18:38.98:0,39,351	0/0:28,0:14:22.45:0,22,181	1/1:4,11:15:33.03:364,33,0	0/0:9,0:9:27.01:0,27,247	0/0:15,0:15:39.02:0,39,357	0/0:15,0:15:38.97:0,39,340	0/0:17,0:17:27.01:0,27,247	1/1:3,15:18:45.13:519,45,0	1/1:3,9:12:27.08:312,27,0	0/0:13,0:13:27.01:0,27,247	0/0:4,0:4:12.01:0,12,110	0/0:8,0:8:17.99:0,18,157	1/1:0,12:12:33.03:364,33,0	1/1:2,11:13:30.09:346,30,0	0/0:22,0:22:50.94:0,51,456	1/1:2,6:8:9.03:104,9,0	0/0:18,0:18:48.01:0,48,438	0/0:20,0:20:56.96:0,57,508	0/0:14,0:13:23.98:0,24,214	1/1:2,13:15:36.02:398,36,0	1/1:1,16:17:40.28:435,40,0	1/1:5,24:29:45.49:499,45,0	0/0:14,0:14:35.99:0,36,324	0/0:29,1:30:49.39:0,49,688	0/0:18,0:18:35.99:0,36,329	0/0:2,0:2:6:0,6,55
chr10	8213368	.	T	TTG	806.93	PASS	AB=0.916;AC=15;AF=0.300;AN=50;BaseQRankSum=-2.469;DP=510;FS=0.906;HRun=0;HaplotypeScore=96.3104;InbreedingCoeff=0.3096;MQ=72.87;MQ0=9;MQRankSum=-0.711;QD=4.39;ReadPosRankSum=-0.596;VQSLOD=2.7106;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:27,1:29:31.38:31,0,66	0/0:10,0:10:11.85:0,12,104	0/0:26,0:17:0:0,0,0	./.	0/0:27,0:26:12.01:0,12,120	0/0:13,0:14:3.08:0,3,70	0/0:17,0:19:5.68:0,6,46	0/0:31,0:30:1.21:0,1,28	0/0:10,0:10:9.02:0,9,95	1/1:22,0:22:6.01:71,6,0	0/1:14,0:14:0:0,0,0	0/0:14,0:14:12.03:0,12,129	./.	0/0:9,0:10:3.01:0,3,32	1/1:7,3:9:6.02:89,6,0	0/0:20,0:21:18.32:0,18,166	0/0:18,0:20:5.63:0,6,209	1/1:11,9:23:15.05:222,15,0	0/0:12,0:13:5.84:0,6,46	0/0:14,0:14:11.56:0,12,110	./.	0/1:11,7:19:16.30:162,0,16	1/1:7,2:11:3:27,3,0	1/1:15,9:25:17.80:234,18,0	0/1:19,0:20:83.91:84,0,130	0/0:20,0:19:2.87:0,3,32	0/0:20,0:22:14.70:0,15,125	0/1:9,1:10:35.44:35,0,37
chr10	8214434	.	C	CT	2294.82	PASS	AB=0.920;AC=15;AF=0.268;AN=56;BaseQRankSum=-8.907;DP=597;FS=4.060;HRun=10;HaplotypeScore=60.3402;InbreedingCoeff=0.8791;MQ=67.52;MQ0=2;MQRankSum=0.516;QD=14.90;ReadPosRankSum=3.126;VQSLOD=4.1076;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:24:61.94:0,62,494	0/0:11,0:11:26.97:0,27,222	0/0:31,0:17:41.13:0,41,300	0/0:24,0:12:11.82:0,12,153	0/0:26,0:26:59.59:0,60,492	0/0:22,0:22:56.91:0,57,465	0/0:21,0:21:44.91:0,45,369	0/0:28,0:28:46.36:0,46,473	0/0:13,0:13:29.95:0,30,246	1/1:6,8:14:24.06:254,24,0	1/1:4,15:19:39.06:403,39,0	0/0:21,0:21:53.82:0,54,432	0/0:17,0:17:44.95:0,45,369	0/0:21,0:21:53.89:0,54,433	1/1:3,11:14:24.06:256,24,0	0/0:23,0:23:53.86:0,54,437	0/0:33,0:34:94.91:0,95,769	1/1:3,21:24:42.11:448,42,0	0/0:16,0:16:41.94:0,42,344	0/0:25,0:25:59.89:0,60,489	0/0:18,0:20:49:0,49,381	1/1:2,10:12:21.05:224,21,0	1/1:2,15:17:42.11:447,42,0	1/1:10,20:31:4.70:445,5,0	0/0:27,0:28:82.92:0,83,665	0/1:21,2:23:12.81:13,0,318	0/0:32,0:33:91.89:0,92,738	0/0:5,0:5:14.91:0,15,115
chr10	8215975	.	C	CT	3648.03	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=-4.125;DP=522;FS=0.879;HRun=8;HaplotypeScore=71.8398;InbreedingCoeff=0.8562;MQ=72.89;MQ0=5;MQRankSum=1.779;QD=24.48;ReadPosRankSum=-0.720;VQSLOD=4.0828;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:90.03:0,90,818	0/0:9,0:9:24.01:0,24,220	0/0:42,0:19:2.54:0,3,236	0/0:29,0:14:5.21:0,5,87	1/1:10,22:32:81.01:905,81,0	0/0:16,0:16:44.52:0,45,394	0/0:13,0:13:36.02:0,36,330	0/0:29,0:29:53.97:0,54,483	0/0:16,0:16:37.24:0,37,328	1/1:6,10:16:45.12:504,45,0	1/1:3,11:14:33.10:379,33,0	0/0:16,0:16:48.01:0,48,433	0/0:18,0:18:41.95:0,42,370	0/0:16,0:16:42.02:0,42,384	1/1:3,15:18:20.99:366,21,0	1/1:9,8:17:42.12:480,42,0	0/0:26,0:27:65.04:0,65,578	1/1:2,9:11:24.07:277,24,0	0/0:18,0:17:36:0,36,329	0/0:16,0:16:44.92:0,45,399	0/0:5,0:5:5.56:0,6,55	1/1:2,8:9:24.07:274,24,0	1/1:4,12:15:27.08:312,27,0	1/1:0,9:9:12.04:138,12,0	0/0:24,0:24:50.18:0,50,531	0/0:21,0:21:54.01:0,54,489	0/0:25,0:25:62.92:0,63,555	0/1:6,0:6:12.46:12,0,70
chr10	8216348	.	T	TA	3986.23	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-10.354;DP=534;FS=3.380;HRun=9;HaplotypeScore=52.0851;InbreedingCoeff=0.9523;MQ=75.77;MQ0=0;MQRankSum=-1.798;QD=25.72;ReadPosRankSum=-0.493;VQSLOD=4.0851;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:49.38:0,49,576	0/0:6,0:6:14.99:0,15,130	0/0:11,0:11:7.36:0,7,98	0/0:10,0:10:9.35:0,9,64	0/0:30,0:30:74.93:0,75,642	0/0:32,0:33:91.99:0,92,783	0/0:19,1:20:11.79:0,12,328	0/0:22,0:22:53.95:0,54,463	0/0:14,0:14:41.99:0,42,364	1/1:5,13:18:39.11:431,39,0	1/1:3,16:19:45.12:498,45,0	0/0:15,0:15:41.99:0,42,364	0/0:23,0:23:59.97:0,60,517	0/0:13,0:13:32.99:0,33,286	1/1:1,14:15:42.11:465,42,0	0/0:20,0:20:53.97:0,54,465	0/0:21,0:21:56.99:0,57,495	1/1:2,13:15:39.11:431,39,0	0/0:18,0:18:32.98:0,33,286	0/0:29,0:29:62.96:0,63,547	1/1:3,13:16:33.09:365,33,0	1/1:7,21:28:34.11:605,34,0	1/1:3,19:22:49.68:528,50,0	1/1:2,20:22:60.16:664,60,0	0/0:19,0:19:44.97:0,45,391	0/0:20,0:20:47.98:0,48,417	0/0:22,0:22:56.91:0,57,484	0/0:5,0:5:5.97:0,6,52
chr10	8217268	.	CA	C	2606.02	PASS	AB=0.728;AC=38;AF=0.679;AN=56;BaseQRankSum=0.111;DP=488;FS=4.788;HRun=13;HaplotypeScore=95.6118;InbreedingCoeff=0.3145;MQ=65.67;MQ0=12;MQRankSum=-2.134;QD=6.97;ReadPosRankSum=1.664;VQSLOD=2.9250;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:24:49.96:0,50,471	0/1:3,3:6:14.97:54,0,15	0/0:53,0:22:37.14:0,37,266	0/1:48,0:12:10.03:10,0,17	0/0:20,3:23:7.19:0,7,377	1/1:3,9:11:26.85:197,27,0	1/1:6,4:10:14.83:107,15,0	0/1:9,9:18:3.37:132,0,3	1/1:5,4:9:11.11:72,11,0	1/1:3,0:17:33.49:103,33,0	1/1:2,0:16:28.51:82,29,0	1/1:4,1:7:9.84:39,10,0	0/1:9,7:16:5.45:146,0,5	1/1:3,11:15:33.89:230,34,0	1/1:6,0:13:16.39:52,16,0	0/0:10,0:10:26.96:0,27,244	1/1:12,20:33:31.77:377,32,0	1/1:2,0:11:19.69:56,20,0	0/1:14,5:19:20.98:169,0,21	0/1:5,2:8:15.35:50,0,15	0/0:4,0:4:0:0,0,0	1/1:1,0:10:15.58:46,16,0	1/1:4,0:21:36.44:106,36,0	1/1:7,0:14:26.38:93,26,0	0/1:8,13:21:12.50:198,0,13	1/1:9,10:19:32.78:218,33,0	1/1:3,3:6:11.73:80,12,0	0/1:8,7:16:10.44:164,0,10
chr10	8217299	.	AAAAC	A	1666.10	PASS	AB=0.972;AC=13;AF=0.232;AN=56;BaseQRankSum=5.056;DP=494;FS=5.343;HRun=0;HaplotypeScore=125.8951;InbreedingCoeff=0.1516;MQ=53.16;MQ0=10;MQRankSum=-3.341;QD=6.56;ReadPosRankSum=2.931;VQSLOD=2.0512;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:21:54.87:0,55,599	0/0:5,0:5:11.02:0,11,99	0/1:39,0:7:16.27:17,0,16	0/1:57,0:14:3.50:3,0,9	0/1:25,0:25:99:274,0,109	0/0:11,0:11:25.92:0,26,334	0/0:12,0:12:34.79:0,35,356	0/0:21,0:19:20.27:0,20,363	0/0:7,0:7:14.73:0,15,133	1/1:25,0:25:49.47:458,49,0	0/1:13,0:13:26.22:115,0,26	0/0:7,0:7:17.51:0,18,131	0/0:16,0:16:38.44:0,38,357	0/0:15,0:15:14.49:0,14,331	0/1:18,0:17:21.72:144,0,22	0/1:8,4:12:6.15:125,0,6	0/0:30,0:30:56.47:0,56,706	1/1:13,2:14:29.21:253,29,0	0/0:20,0:19:49.70:0,50,504	0/0:13,0:13:31.32:0,31,268	0/0:4,0:4:5.23:0,5,29	0/1:7,0:7:9.36:78,0,9	0/1:28,0:27:65:271,0,65	0/1:12,0:10:61.40:91,0,61	0/0:17,0:17:50.93:0,51,713	0/0:17,0:17:29.08:0,29,409	0/0:10,0:9:24.02:0,24,203	0/0:13,0:13:24.08:0,24,373
chr10	8217302	.	AC	A	999.75	PASS	AB=0.968;AC=16;AF=0.286;AN=56;BaseQRankSum=-0.143;DP=491;FS=125.494;HRun=1;HaplotypeScore=107.2594;InbreedingCoeff=-0.2125;MQ=58.14;MQ0=9;MQRankSum=-3.786;QD=4.57;ReadPosRankSum=2.405;VQSLOD=0.0570;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:20,3:22:68.64:69,0,157	0/0:4,0:4:6.06:0,6,34	0/0:35,5:7:3.89:0,4,56	0/0:54,4:18:2.48:0,2,28	0/0:23,1:24:21.22:0,21,221	0/0:12,0:12:10.74:0,11,118	0/1:11,1:12:59.16:69,0,59	0/1:20,0:18:97.84:98,0,141	1/1:4,3:7:10.26:76,10,0	0/0:25,0:25:27.11:0,27,174	0/0:14,0:14:18.38:0,18,114	0/1:6,0:6:20.03:84,0,20	0/1:16,0:16:28.15:177,0,28	0/1:15,0:15:53.95:54,0,90	0/0:17,0:16:4.16:0,4,43	0/0:12,0:12:0.98:0,1,53	0/1:26,3:29:99:178,0,135	0/1:14,0:13:20.52:21,0,29	0/1:19,1:19:73.45:73,0,111	0/1:13,0:13:25.32:25,0,102	0/0:4,0:4:3.25:0,3,13	0/0:7,0:7:4.03:0,4,39	0/0:28,0:28:0.22:0,0,164	0/0:12,0:10:10.71:0,11,87	0/1:16,1:17:41.15:41,0,181	0/1:17,0:17:74.97:75,0,90	1/1:10,0:9:6.85:114,7,0	0/0:15,0:15:15.79:0,16,117
chr10	8217303	.	CAAAA	C	3543.80	PASS	AB=0.864;AC=18;AF=0.321;AN=56;BaseQRankSum=-0.013;DP=506;FS=2.000;HRun=16;HaplotypeScore=124.7588;InbreedingCoeff=0.7878;MQ=58.83;MQ0=10;MQRankSum=-2.066;QD=16.56;ReadPosRankSum=1.919;VQSLOD=1.6367;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:22:47.95:0,48,630	0/0:3,0:4:9.02:0,9,101	0/0:44,0:7:1.66:0,2,64	0/1:60,0:19:25.94:26,0,59	1/1:10,14:24:41.78:545,42,0	0/0:7,0:12:21.94:0,22,298	0/0:8,0:12:36.11:0,36,500	0/0:20,0:19:41.58:0,42,463	0/0:5,0:7:15.05:0,15,190	1/1:2,23:25:72.14:912,72,0	1/1:7,5:14:27.68:298,28,0	0/0:4,0:6:15.05:0,15,194	0/0:11,0:17:46.90:0,47,558	0/0:10,0:16:28.80:0,29,405	1/1:5,12:16:20.89:261,21,0	1/1:7,5:12:20.60:247,21,0	0/0:22,0:29:55.92:0,56,815	1/1:7,5:13:30.97:364,31,0	0/0:15,0:19:45.57:0,46,553	0/0:7,0:13:29.96:0,30,349	0/0:4,0:4:3.42:0,3,37	0/1:4,3:8:4.03:152,0,4	1/1:9,18:28:29.48:545,29,0	1/1:10,2:10:14.53:194,15,0	0/0:13,0:17:45.06:0,45,756	0/0:13,0:20:45.11:0,45,555	0/0:8,0:11:32.99:0,33,356	0/0:4,0:15:24.08:0,24,367
chr10	8217358	.	A	ACC	148.59	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=0.958;DP=458;FS=0.000;HRun=8;HaplotypeScore=78.0673;InbreedingCoeff=0.9401;MQ=78.69;MQ0=1;MQRankSum=-1.285;QD=16.51;ReadPosRankSum=-0.471;VQSLOD=1.1237;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:25:65.91:0,66,714	0/0:5,0:5:12.02:0,12,133	0/0:29,0:26:44.70:0,45,469	0/0:20,0:15:20.52:0,21,208	0/0:22,0:22:63.16:0,63,696	0/0:13,0:13:30.08:0,30,333	0/0:16,0:16:35.95:0,36,448	0/0:32,0:32:66.11:0,66,721	0/0:14,0:14:36.07:0,36,391	0/0:19,0:19:42.09:0,42,468	0/0:11,0:11:21.04:0,21,234	0/0:9,0:9:27.05:0,27,291	0/0:8,0:8:24.06:0,24,267	0/0:14,0:14:42.11:0,42,468	0/0:17,0:17:33.08:0,33,368	0/0:15,0:15:33.08:0,33,365	0/0:25,0:25:69.17:0,69,768	0/0:13,0:13:39.07:0,39,422	0/0:21,0:22:47.85:0,48,512	0/0:12,0:12:33.09:0,33,367	1/1:1,8:9:15.05:237,15,0	0/0:15,0:15:39.10:0,39,434	0/0:15,0:15:30.08:0,30,333	0/0:12,0:12:33.07:0,33,358	0/0:16,0:16:30.05:0,30,334	0/0:10,0:10:30.08:0,30,330	0/0:18,0:17:51.12:0,51,559	0/0:20,0:20:39.09:0,39,435
chr10	8218416	.	T	TACACAC	3980.50	PASS	AB=0.993;AC=17;AF=0.304;AN=56;BaseQRankSum=8.836;DP=743;FS=4.531;HRun=0;HaplotypeScore=222.2634;InbreedingCoeff=0.5408;MQ=66.25;MQ0=9;MQRankSum=-6.859;QD=15.73;ReadPosRankSum=-3.598;VQSLOD=2.1033;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:32:36.51:0,37,1111	0/0:9,0:9:12.04:0,12,207	0/0:43,0:31:3.25:0,3,243	0/0:42,0:27:9.58:0,10,168	1/1:14,6:20:18.04:273,18,0	0/0:17,0:18:30.04:0,30,520	0/0:29,0:31:41.66:0,42,749	0/0:38,0:39:6.16:0,6,551	0/0:29,0:34:60.22:0,60,1312	1/1:35,0:35:58.43:1172,58,0	0/1:15,0:14:0:0,0,0	0/1:27,0:28:14.90:15,0,1045	0/0:36,0:37:56.96:0,57,1137	0/0:26,0:26:44.26:0,44,770	1/1:24,0:24:23.90:473,24,0	1/1:17,10:28:47.82:1187,48,0	0/1:31,0:32:2.55:3,0,928	0/1:8,0:9:27.06:261,0,27	0/0:21,0:21:13.16:0,13,533	0/0:24,0:27:51.96:0,52,839	0/0:24,0:21:0.31:0,0,0	1/1:34,0:34:20.97:431,21,0	0/0:23,0:23:3.78:0,4,18	1/1:16,0:16:3.01:69,3,0	0/0:32,0:34:51.72:0,52,1280	0/0:27,0:29:60.11:0,60,950	0/0:15,0:15:33.08:0,33,642	0/1:11,0:11:96.11:96,0,169
chr10	8218444	.	CTCCCTCCCTCACATGTACATGCATATAT	C	3661.40	PASS	AB=0.968;AC=11;AF=0.196;AN=56;BaseQRankSum=6.448;DP=845;FS=10.495;HRun=0;HaplotypeScore=517.1816;InbreedingCoeff=-0.0579;MQ=51.71;MQ0=17;MQRankSum=-9.577;QD=14.53;ReadPosRankSum=-1.822;VQSLOD=-0.0639;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,100,6973	0/0:7,0:6:18.06:0,18,1191	0/0:42,0:22:10.67:0,11,762	0/0:45,0:20:4.95:0,5,530	0/1:34,0:31:99:246,0,1109	0/0:19,0:19:54.19:0,54,3069	0/0:24,0:24:69.24:0,69,2979	0/0:38,0:37:99:0,107,2737	0/0:41,0:40:53.83:0,54,5954	0/1:28,2:30:99:1071,0,587	0/0:13,2:13:8.38:0,8,612	0/0:32,0:32:70.27:0,70,5072	0/0:40,0:40:99:0,117,6817	0/0:26,0:26:69.99:0,70,4150	0/1:32,1:33:99:689,0,883	0/1:46,0:46:99:394,0,1304	0/0:30,0:29:52.54:0,53,3292	0/1:10,1:11:99:412,0,440	0/1:20,0:18:3.33:3,0,2288	0/0:26,0:26:72.23:0,72,3543	0/0:78,0:68:7.03:0,7,845	0/1:26,2:28:99:787,0,252	0/1:18,1:19:2.49:2,0,303	1/1:20,0:20:5.57:18,6,0	0/0:34,0:34:99:0,102,5540	0/0:30,0:30:90.26:0,90,4100	0/0:20,0:20:57.03:0,57,3299	0/1:11,0:11:36.72:37,0,1591
chr10	8218466	.	CATAT	C	1939.01	PASS	AB=0.876;AC=15;AF=0.268;AN=56;BaseQRankSum=13.727;DP=894;FS=0.426;HRun=0;HaplotypeScore=255.6022;InbreedingCoeff=0.5142;MQ=53.32;MQ0=3;MQRankSum=-9.996;QD=5.06;ReadPosRankSum=-1.458;VQSLOD=1.9707;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:48:99:0,126,2914	0/0:9,0:9:27.09:0,27,697	0/0:33,0:19:18.21:0,18,650	0/0:31,0:19:26.40:0,26,515	0/1:31,1:32:20.61:21,0,256	0/0:20,0:19:60.20:0,60,1541	0/0:24,0:24:60.09:0,60,1361	0/0:43,0:42:99:0,114,2685	0/0:35,0:35:41.83:0,42,2137	1/1:38,4:43:45.75:1034,46,0	1/1:18,1:19:10.44:49,10,0	0/0:42,0:42:83.44:0,83,2748	0/0:35,0:35:99:0,99,2404	0/0:25,0:25:72.25:0,72,1763	1/1:37,2:40:26.93:297,27,0	0/1:36,6:43:99:335,0,401	0/0:26,0:25:58.06:0,58,1474	0/1:14,1:15:38.58:162,0,39	0/0:21,0:21:29.35:0,29,1304	0/0:24,0:24:66.19:0,66,1514	0/1:71,12:84:33.63:34,0,676	1/1:30,3:36:16.01:85,16,0	0/1:29,4:34:31.47:58,0,31	1/1:18,7:25:7.46:47,7,0	0/0:30,0:30:87.12:0,87,2020	0/0:28,0:28:84.29:0,84,2106	0/0:20,0:20:56.79:0,57,1408	0/0:17,0:17:20.51:0,21,1023
chr10	8218468	.	TATATAC	T	2259.23	PASS	AB=0.840;AC=11;AF=0.196;AN=56;BaseQRankSum=10.350;DP=884;FS=0.000;HRun=0;HaplotypeScore=279.4065;InbreedingCoeff=-0.2480;MQ=53.85;MQ0=2;MQRankSum=-10.501;QD=5.76;ReadPosRankSum=-1.106;VQSLOD=1.4298;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,135,4155	0/0:9,0:9:27.09:0,27,928	0/0:28,0:16:26.94:0,27,785	0/0:26,0:17:26.39:0,26,653	0/1:20,14:32:20.53:21,0,283	0/0:20,0:19:60.21:0,60,2156	0/0:24,0:24:63.11:0,63,1956	0/0:43,0:43:99:0,117,3569	0/0:34,1:35:7.65:0,8,2872	0/1:34,12:45:99:1080,0,311	0/1:14,5:19:39.81:40,0,159	0/0:41,0:41:83.23:0,83,3810	0/0:34,0:34:99:0,99,3246	0/0:26,0:26:75.26:0,75,2443	0/1:30,9:40:99:437,0,136	0/1:34,8:42:99:383,0,517	0/0:26,0:26:60.65:0,61,2067	0/1:12,1:13:99:110,0,141	0/0:22,0:22:66.13:0,66,1836	0/0:24,0:24:66.20:0,66,1942	0/1:84,0:77:22.15:22,0,1016	0/1:28,8:37:99:130,0,115	0/1:23,10:33:99:106,0,151	0/1:20,5:25:58.60:59,0,64	0/0:29,0:29:87.29:0,87,2685	0/0:29,0:29:87.30:0,87,2907	0/0:21,0:21:59.70:0,60,1930	0/1:15,0:17:20.26:20,0,1362
chr10	8218472	.	TACAC	T	2558.96	PASS	AB=0.780;AC=11;AF=0.196;AN=56;BaseQRankSum=9.508;DP=945;FS=0.917;HRun=0;HaplotypeScore=265.7068;InbreedingCoeff=0.2681;MQ=53.31;MQ0=3;MQRankSum=-6.767;QD=8.25;ReadPosRankSum=0.220;VQSLOD=2.3535;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:56:99:0,124,2831	0/0:10,0:10:27.09:0,27,655	0/1:27,0:16:4.47:4,0,346	0/0:23,0:16:23.71:0,24,383	0/0:25,0:32:19.59:0,20,89	0/0:23,0:22:69.24:0,69,1592	0/0:24,0:25:65.90:0,66,1442	0/0:39,0:39:84.27:0,84,1831	0/0:32,0:32:66.44:0,66,1756	0/1:37,16:52:99:911,0,232	0/1:12,8:20:21.30:347,0,21	0/0:42,0:42:99:0,111,2559	0/0:38,0:38:99:0,99,2148	0/0:26,0:27:66:0,66,1442	0/1:26,18:44:27.96:370,0,28	0/1:34,1:47:99:119,0,155	0/0:26,0:25:61.06:0,61,1331	0/1:10,6:16:99:258,0,109	0/0:26,0:26:59.50:0,60,1104	0/0:25,0:25:51.15:0,51,1096	0/0:97,0:105:43.57:0,44,664	0/1:30,11:42:2.82:263,0,3	1/1:21,11:33:19.06:274,19,0	1/1:17,9:26:11.48:167,11,0	0/0:28,0:28:69.19:0,69,1499	0/0:30,0:31:87.07:0,87,1883	0/0:22,0:22:54.18:0,54,1250	0/0:16,0:16:29.18:0,29,833
chr10	8218509	.	G	GCACA	443.48	PASS	AB=0.817;AC=5;AF=0.089;AN=56;BaseQRankSum=5.902;DP=1099;FS=0.586;HRun=0;HaplotypeScore=287.2289;InbreedingCoeff=-0.1009;MQ=50.48;MQ0=11;MQRankSum=-1.294;QD=1.29;ReadPosRankSum=-3.199;VQSLOD=1.4242;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:48:94.43:0,94,1443	0/0:15,0:15:14.49:0,14,458	0/1:30,0:9:22.01:22,0,181	0/0:34,0:20:26.03:0,26,245	0/1:28,0:38:72.99:73,0,195	0/0:32,0:33:26.89:0,27,1069	0/0:32,0:33:84.28:0,84,1373	0/0:29,0:29:25.21:0,25,585	0/0:35,0:36:69.21:0,69,1076	0/0:61,0:64:99:0,113,1744	0/0:27,0:27:46.60:0,47,738	0/0:41,0:43:99:0,99,1533	0/0:27,0:31:62.25:0,62,1001	0/0:29,0:31:81.23:0,81,1242	0/0:48,0:50:72.77:0,73,887	0/1:30,0:54:99:152,0,471	0/0:29,0:32:65.87:0,66,1158	0/0:20,0:21:9.88:0,10,470	0/0:13,0:13:29.97:0,30,390	0/0:13,0:14:29.77:0,30,436	0/1:113,83:192:99:254,0,445	0/0:46,0:51:39.66:0,40,822	0/0:36,0:37:33.63:0,34,479	0/0:31,0:32:44.95:0,45,696	0/0:25,0:25:50.36:0,50,736	0/0:34,0:35:90.26:0,90,1441	0/0:16,0:16:42.10:0,42,634	0/1:9,0:11:59.08:59,0,294
chr10	8218641	.	G	GCA	1256.60	PASS	AB=0.523;AC=3;AF=0.054;AN=56;BaseQRankSum=-5.839;DP=973;FS=5.577;HRun=0;HaplotypeScore=149.1421;InbreedingCoeff=0.6119;MQ=56.85;MQ0=7;MQRankSum=0.304;QD=20.94;ReadPosRankSum=1.883;VQSLOD=3.7589;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:45:99:0,114,1383	0/0:17,0:17:51.16:0,51,631	0/0:47,0:28:7.48:0,7,326	0/0:38,0:16:30.08:0,30,342	0/1:2,21:23:41.30:410,0,41	0/0:21,0:21:51.11:0,51,600	0/0:38,0:38:75.22:0,75,912	0/0:36,0:38:79.45:0,79,883	0/0:41,0:41:95.97:0,96,1168	0/0:33,0:33:78.24:0,78,951	0/0:23,0:23:45.14:0,45,557	0/0:41,0:43:95.94:0,96,1117	0/0:41,0:42:99:0,102,1240	0/0:41,0:41:96.30:0,96,1183	0/0:31,0:31:66.13:0,66,772	1/1:7,30:36:28.29:953,28,0	0/0:37,0:39:86.88:0,87,994	0/0:29,0:29:72.06:0,72,867	0/0:18,0:18:39.04:0,39,439	0/0:26,0:26:63.20:0,63,780	0/0:86,0:88:99:0,141,1794	0/0:30,0:30:42.13:0,42,519	0/0:32,0:32:57.14:0,57,687	0/0:36,0:36:99:0,102,1262	0/0:37,0:39:98.95:0,99,1163	0/0:35,0:35:98.87:0,99,1156	0/0:27,0:27:72.18:0,72,850	0/0:14,0:14:42.13:0,42,518
chr10	8220523	.	G	GAAC	2742.81	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=0.260;DP=656;FS=0.000;HRun=0;HaplotypeScore=104.0282;InbreedingCoeff=0.9948;MQ=64.34;MQ0=1;MQRankSum=-1.383;QD=30.82;ReadPosRankSum=0.318;VQSLOD=3.4227;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:84.24:0,84,1116	0/0:10,0:10:30.10:0,30,410	0/0:31,0:24:27.01:0,27,326	0/0:26,0:19:33.06:0,33,408	1/1:6,18:24:51.02:922,51,0	0/0:17,0:17:39.12:0,39,519	0/0:31,0:31:54.13:0,54,688	0/0:28,0:28:48.15:0,48,632	1/1:6,14:20:42.14:828,42,0	0/0:26,0:26:51.16:0,51,686	0/0:9,0:10:27.06:0,27,350	0/0:19,0:19:39.13:0,39,535	0/0:30,0:30:63.19:0,63,846	0/0:20,0:20:45.12:0,45,583	0/0:31,0:31:65.31:0,65,871	1/1:9,21:30:51.18:1006,51,0	0/0:27,0:27:48.16:0,48,657	0/0:17,0:19:41.79:0,42,554	0/0:25,0:25:36.05:0,36,465	0/0:29,0:29:54.17:0,54,725	1/1:15,0:15:15.43:146,15,0	0/0:19,0:19:36.12:0,36,493	0/0:22,0:22:51.13:0,51,663	0/0:25,0:27:42.70:0,43,711	0/0:19,0:19:39.11:0,39,517	0/0:17,0:18:39.08:0,39,488	0/0:35,0:35:60.18:0,60,800	0/0:10,0:10:30.10:0,30,411
chr10	8221558	.	A	ATC	860.04	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-4.063;DP=550;FS=0.900;HRun=0;HaplotypeScore=61.5014;InbreedingCoeff=0.9953;MQ=87.81;MQ0=0;MQRankSum=-3.071;QD=40.95;ReadPosRankSum=-0.625;VQSLOD=5.0616;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:72.24:0,72,1060	0/0:7,0:7:21.07:0,21,309	0/0:26,0:26:57.83:0,58,871	0/0:12,0:12:36.10:0,36,486	0/0:24,0:24:66.22:0,66,972	0/0:13,0:13:39.13:0,39,574	0/0:23,0:23:69.23:0,69,1016	0/0:29,0:29:87.25:0,87,1193	0/0:17,0:17:51.16:0,51,731	0/0:24,0:24:63.21:0,63,926	0/0:12,0:12:36.12:0,36,530	0/0:20,0:20:57.19:0,57,836	0/0:22,0:22:66.22:0,66,970	0/0:27,0:27:81.27:0,81,1193	0/0:24,0:24:72.23:0,72,1040	0/0:20,0:20:57.19:0,57,839	0/0:21,0:21:60.20:0,60,884	0/0:15,0:15:45.15:0,45,663	0/0:22,0:22:63.21:0,63,924	0/0:20,0:20:57.19:0,57,839	1/1:1,20:21:51.17:955,51,0	0/0:11,0:11:33.11:0,33,484	0/0:14,0:14:42.14:0,42,618	0/0:15,0:15:42.14:0,42,619	0/0:27,0:27:75.25:0,75,1103	0/0:21,0:21:60.20:0,60,882	0/0:21,0:21:60.19:0,60,857	0/0:17,0:16:48.16:0,48,703
chr10	8221661	.	CTCTG	C	409.96	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.423;DP=456;FS=5.369;HRun=0;HaplotypeScore=74.3159;InbreedingCoeff=0.9744;MQ=96.31;MQ0=0;MQRankSum=-2.155;QD=34.16;ReadPosRankSum=1.307;VQSLOD=3.4075;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:78.25:0,78,1970	0/0:13,0:13:39.13:0,39,1040	0/0:20,0:20:51.17:0,51,1239	0/0:28,0:28:55.45:0,55,1497	0/0:14,0:14:36.12:0,36,959	0/0:20,0:20:54.18:0,54,1362	0/0:15,0:15:39.13:0,39,1040	0/0:25,0:25:69.23:0,69,1788	0/0:13,0:13:39.13:0,39,1040	0/0:12,0:12:36.12:0,36,959	0/0:15,0:15:45.15:0,45,1138	0/0:14,0:14:39.12:0,39,945	0/0:13,0:13:36.12:0,36,896	0/0:21,0:21:63.22:0,63,1680	0/0:21,0:21:57.20:0,57,1496	0/0:14,0:14:36.12:0,36,960	0/0:17,0:17:48.16:0,48,1277	0/0:6,0:6:18.06:0,18,480	0/0:17,0:17:39.13:0,39,1013	0/0:22,0:22:60.21:0,60,1600	1/1:0,12:12:27.09:504,27,0	0/0:10,0:10:30.10:0,30,760	0/0:17,0:17:48.16:0,48,1279	0/0:17,0:17:51.18:0,51,1360	0/0:16,0:16:48.16:0,48,1281	0/0:13,0:13:39.13:0,39,1040	0/0:18,0:18:51.18:0,51,1357	0/0:6,0:6:15.05:0,15,400
chr10	8221827	.	CGT	C	6206.23	PASS	AB=0.590;AC=47;AF=0.839;AN=56;BaseQRankSum=3.567;DP=445;FS=0.000;HRun=0;HaplotypeScore=76.4164;InbreedingCoeff=0.6059;MQ=68.15;MQ0=13;MQRankSum=3.957;QD=17.24;ReadPosRankSum=2.650;VQSLOD=4.4318;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,1:21:19.36:0,19,735	1/1:1,2:4:8.86:84,9,0	0/0:34,0:12:11.75:0,12,119	0/0:29,1:14:14.06:0,14,89	1/1:6,0:20:18.49:138,18,0	0/1:6,11:18:10.87:326,0,11	1/1:4,10:15:8.95:303,9,0	1/1:18,11:29:30.06:328,30,0	1/1:1,10:13:32.76:341,33,0	1/1:4,0:14:22.73:112,23,0	1/1:4,0:14:25.57:126,26,0	1/1:1,12:12:36.11:418,36,0	1/1:2,6:8:15.04:174,15,0	1/1:7,7:15:35.94:393,36,0	1/1:1,0:16:39.77:195,40,0	1/1:0,0:10:25.57:126,26,0	1/1:5,19:25:53.56:584,54,0	1/1:3,0:8:14.20:70,14,0	0/1:8,11:20:10.91:314,0,11	1/1:1,12:12:33.10:383,33,0	1/1:3,0:12:19.89:98,20,0	0/1:1,0:6:1.10:42,0,1	1/1:3,0:12:22.73:112,23,0	1/1:0,0:8:22.73:112,23,0	1/1:4,13:16:33.10:382,33,0	1/1:1,9:11:26.63:259,27,0	1/1:2,8:10:18.05:209,18,0	1/1:7,17:27:56.49:578,56,0
chr10	8227548	.	AAAC	A	1178.99	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.677;DP=753;FS=9.366;HRun=0;HaplotypeScore=112.8774;InbreedingCoeff=0.9997;MQ=88.89;MQ0=0;MQRankSum=-0.928;QD=42.11;ReadPosRankSum=3.317;VQSLOD=4.9800;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,111,2459	0/0:11,0:11:33.11:0,33,737	0/0:29,0:29:46.88:0,47,1646	0/0:28,0:28:81.22:0,81,1619	0/0:27,0:27:78.27:0,78,1731	0/0:32,0:32:93.30:0,93,1997	0/0:29,0:29:81.25:0,81,1689	0/0:36,0:36:99:0,102,2179	0/0:38,0:38:99:0,111,2476	0/0:27,0:27:78.27:0,78,1727	0/0:22,0:22:60.20:0,60,1288	0/0:17,0:17:51.18:0,51,1139	0/0:39,0:39:99:0,114,2526	0/0:37,0:37:99:0,111,2463	0/0:41,0:41:99:0,114,2435	0/0:26,0:26:75.24:0,75,1624	0/0:36,0:36:99:0,105,2246	0/0:25,0:25:72.25:0,72,1607	0/0:17,0:17:48.16:0,48,1022	0/0:18,0:18:54.18:0,54,1166	1/1:1,27:28:78.27:1274,78,0	0/0:31,0:31:90.31:0,90,2010	0/0:20,0:20:57.20:0,57,1273	0/0:23,0:23:66.21:0,66,1412	0/0:22,0:22:60.21:0,60,1324	0/0:20,0:20:57.19:0,57,1234	0/0:24,0:24:66.23:0,66,1473	0/0:13,0:13:39.13:0,39,871
chr10	8228007	.	GTGTGTA	G	180.28	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=2.774;DP=771;FS=8.692;HRun=0;HaplotypeScore=167.0998;InbreedingCoeff=0.9340;MQ=65.54;MQ0=11;MQRankSum=0.003;QD=3.84;ReadPosRankSum=1.268;VQSLOD=2.2058;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:94.42:0,94,1775	0/0:13,0:13:39.05:0,39,1030	0/0:28,0:19:51.03:0,51,569	0/0:30,0:15:32.94:0,33,402	1/1:19,3:22:5.77:212,6,0	0/0:31,0:31:75.11:0,75,1601	0/0:22,0:22:63.01:0,63,1421	0/0:26,0:26:66.07:0,66,879	0/0:29,0:28:79.72:0,80,1571	0/0:14,0:13:39.01:0,39,471	0/0:24,0:24:56.69:0,57,1073	0/0:30,0:30:89.10:0,89,1501	0/0:39,0:38:99:0,108,2204	0/0:26,0:26:65.99:0,66,1515	0/0:46,0:46:99:0,129,3109	1/1:23,2:25:16.50:76,16,0	0/0:30,0:28:72.05:0,72,1776	0/0:24,0:24:60.11:0,60,1375	0/0:25,0:24:65.18:0,65,1033	0/0:32,0:32:81.19:0,81,1850	0/0:37,0:35:65.97:0,66,933	0/0:34,0:34:95.08:0,95,2044	0/0:29,0:29:81.16:0,81,2019	0/0:19,0:18:51.02:0,51,1321	0/0:17,0:17:45.07:0,45,1037	0/0:29,0:29:86.92:0,87,2054	0/0:32,0:32:87.21:0,87,2140	0/0:17,0:17:48.09:0,48,1254
chr10	8228009	.	GTGTA	G	504.22	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=2.453;DP=789;FS=13.717;HRun=0;HaplotypeScore=139.9976;InbreedingCoeff=0.9947;MQ=65.23;MQ0=11;MQRankSum=-0.788;QD=10.73;ReadPosRankSum=0.005;VQSLOD=2.2201;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:67.67:0,68,1327	0/0:13,0:13:39.01:0,39,756	0/0:28,0:19:51.03:0,51,545	0/0:30,0:15:32.68:0,33,342	1/1:15,8:23:33.33:322,33,0	0/0:31,0:31:75.06:0,75,1206	0/0:24,0:24:68.99:0,69,1204	0/0:27,0:27:72.80:0,73,796	0/0:31,0:30:61.38:0,61,1244	0/0:14,0:13:39:0,39,401	0/0:25,0:25:36.35:0,36,795	0/0:32,0:32:89.01:0,89,1155	0/0:40,0:39:99:0,111,1657	0/0:26,0:26:65.97:0,66,1176	0/0:47,0:47:99:0,109,2357	1/1:4,20:24:17.82:302,18,0	0/0:31,0:29:72.03:0,72,1387	0/0:24,0:24:63.05:0,63,1049	0/0:26,0:25:67.78:0,68,912	0/0:32,0:32:83.07:0,83,1329	0/0:37,0:35:65.78:0,66,694	0/0:36,0:36:28.30:0,28,1474	0/0:29,0:29:81.12:0,81,1555	0/0:21,0:20:34.11:0,34,1011	0/0:18,0:18:48.07:0,48,866	0/0:29,0:29:86.92:0,87,1567	0/0:33,0:33:86.15:0,86,1596	0/0:17,0:17:48.07:0,48,947
chr10	8229132	.	GC	G	6998.31	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=19.044;DP=768;FS=5.917;HRun=1;HaplotypeScore=96.3153;InbreedingCoeff=0.9995;MQ=85.74;MQ0=1;MQRankSum=-7.680;QD=39.99;ReadPosRankSum=2.799;VQSLOD=5.2328;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,120,1869	0/0:10,0:10:30.10:0,30,476	0/0:28,0:28:84.24:0,84,1255	0/0:20,0:20:60.19:0,60,906	0/0:30,0:30:90.31:0,90,1439	0/0:24,0:24:72.25:0,72,1151	0/0:26,0:26:78.27:0,78,1247	0/0:34,0:34:99:0,102,1607	0/0:30,0:30:90.29:0,90,1415	1/1:0,27:27:81.23:1083,81,0	1/1:0,24:24:72.24:1007,72,0	0/0:29,0:29:87.30:0,87,1391	0/0:32,0:32:96.31:0,96,1509	0/0:33,0:33:99:0,99,1558	1/1:0,29:29:84.28:1175,84,0	0/0:43,0:43:99:0,129,2060	0/0:30,0:30:90.24:0,90,1358	1/1:0,29:29:84.28:1175,84,0	0/0:15,0:15:45.14:0,45,697	0/0:26,0:26:78.25:0,78,1219	0/0:59,0:58:99:0,175,2778	1/1:0,18:18:48.16:670,48,0	1/1:0,23:23:66.22:923,66,0	1/1:0,25:25:69.23:965,69,0	0/0:17,0:17:51.16:0,51,790	0/0:33,0:33:96.33:0,96,1536	0/0:26,0:26:78.23:0,78,1195	0/0:8,0:8:24.08:0,24,378
chr10	8229306	.	G	GT	8975.37	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-16.652;DP=722;FS=7.877;HRun=5;HaplotypeScore=68.4395;InbreedingCoeff=0.9689;MQ=82.73;MQ0=0;MQRankSum=-5.343;QD=32.76;ReadPosRankSum=2.376;VQSLOD=5.4221;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,99,1063	0/0:20,0:20:57.14:0,57,612	0/0:24,0:24:60.10:0,60,626	0/0:21,0:21:54.13:0,54,574	1/1:2,29:31:84.27:1105,84,0	0/0:27,0:27:78.18:0,78,829	0/0:19,0:19:51.13:0,51,548	0/0:24,0:24:66.17:0,66,709	0/0:23,0:23:63.16:0,63,677	1/1:4,27:31:84.27:1103,84,0	1/1:2,20:22:54.18:710,54,0	0/0:32,0:32:96.24:0,96,1031	0/0:30,0:30:86.90:0,87,934	0/0:22,0:22:57.13:0,57,605	1/1:2,35:37:93.30:1224,93,0	1/1:3,33:36:58.04:1113,58,0	0/0:24,0:24:63.14:0,63,669	1/1:1,17:18:44.85:573,45,0	0/0:33,0:33:99:0,99,1043	0/0:28,0:28:69.17:0,69,741	1/1:4,19:23:51.17:668,51,0	1/1:2,19:21:51.16:664,51,0	1/1:1,24:25:63.20:829,63,0	1/1:4,26:30:75.24:987,75,0	0/0:20,0:20:57.14:0,57,612	0/0:27,2:29:2.25:0,2,726	0/0:30,0:30:84.17:0,84,889	0/0:7,0:7:15.03:0,15,161
chr10	8230119	.	TA	T	846.26	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=7.992;DP=580;FS=0.000;HRun=11;HaplotypeScore=61.9266;InbreedingCoeff=0.8386;MQ=74.86;MQ0=1;MQRankSum=-1.756;QD=14.59;ReadPosRankSum=0.738;VQSLOD=3.9356;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,1:43:79.52:0,80,1014	0/0:6,0:6:18.01:0,18,176	0/0:22,0:21:23.19:0,23,311	0/0:16,0:14:14.18:0,14,110	1/1:3,22:26:58.86:464,59,0	0/0:18,0:18:32.21:0,32,398	0/0:15,2:17:17.46:0,17,390	0/0:22,0:22:37.86:0,38,561	0/0:11,1:12:1.84:0,2,251	0/0:19,0:19:32.30:0,32,416	0/0:25,0:26:72:0,72,741	0/0:13,0:13:33.08:0,33,352	0/0:13,0:13:33.05:0,33,334	0/0:22,0:22:54.11:0,54,561	0/0:22,0:22:57.13:0,57,601	1/1:4,13:17:29.95:246,30,0	0/0:34,1:35:62.56:0,63,856	0/0:25,0:25:39.29:0,39,607	0/0:14,1:15:14.44:0,14,342	0/0:22,3:25:1.26:0,1,608	1/1:2,12:15:35.18:277,35,0	0/0:18,1:19:29.32:0,29,476	0/0:30,3:33:13.26:0,13,737	0/0:20,0:20:57.14:0,57,608	0/0:27,0:28:78.03:0,78,814	0/0:20,0:19:51.12:0,51,537	0/0:22,0:21:63.13:0,63,656	0/0:8,0:8:23.99:0,24,241
chr10	8231609	.	TGA	T	11277.39	PASS	AB=0.615;AC=43;AF=0.768;AN=56;BaseQRankSum=-0.187;DP=703;FS=9.134;HRun=0;HaplotypeScore=105.4206;InbreedingCoeff=0.8785;MQ=66.74;MQ0=7;MQRankSum=1.220;QD=21.52;ReadPosRankSum=1.339;VQSLOD=5.2812;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,1:28:24.43:0,24,854	1/1:2,8:11:20.55:223,21,0	0/0:27,0:19:16.80:0,17,182	0/0:35,1:18:9.66:0,10,88	0/0:29,1:30:27.46:0,27,920	1/1:4,24:28:66.20:787,66,0	1/1:6,22:30:56.84:636,57,0	1/1:9,24:33:59.17:673,59,0	1/1:6,21:27:54.17:644,54,0	1/1:3,20:23:57.17:677,57,0	1/1:4,14:18:27.08:322,27,0	1/1:5,23:29:63.02:729,63,0	1/1:9,22:33:62.85:707,63,0	1/1:0,18:19:47.98:550,48,0	1/1:6,27:33:72.22:854,72,0	0/0:24,0:23:54.17:0,54,830	1/1:7,9:18:26.75:278,27,0	0/1:6,10:16:27.06:223,0,27	1/1:8,4:12:12.01:129,12,0	1/1:10,23:33:47.98:551,48,0	0/0:31,0:34:69.21:0,69,1043	1/1:5,14:19:33.10:393,33,0	1/1:9,18:27:39.12:463,39,0	1/1:9,18:27:45.14:535,45,0	1/1:7,23:29:48.15:572,48,0	1/1:7,16:22:42.13:500,42,0	1/1:3,22:27:56.84:636,57,0	1/1:0,7:8:17.89:193,18,0
chr10	8235278	.	G	GAA	1593.93	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=11.329;DP=588;FS=14.791;HRun=2;HaplotypeScore=86.3961;InbreedingCoeff=0.9843;MQ=87.28;MQ0=0;MQRankSum=-10.929;QD=27.48;ReadPosRankSum=-0.524;VQSLOD=1.5816;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:48.14:0,48,684	0/0:14,0:14:42.09:0,42,559	0/0:22,0:22:66.20:0,66,921	0/0:24,0:24:53.03:0,53,710	1/1:5,18:23:44.94:614,45,0	0/0:27,0:27:81.26:0,81,1172	0/0:22,0:22:63.20:0,63,907	0/0:30,0:29:84.27:0,84,1215	0/0:14,0:14:39.12:0,39,553	0/0:28,0:27:81.26:0,81,1145	0/0:23,0:23:66.22:0,66,969	0/0:18,0:18:51.17:0,51,747	0/0:25,0:25:69.20:0,69,992	0/0:24,0:24:69.19:0,69,952	0/0:28,0:28:81.27:0,81,1191	1/1:2,17:19:54.16:726,54,0	0/0:17,0:17:48.13:0,48,667	1/1:0,6:6:18.02:230,18,0	0/0:23,0:23:63.17:0,63,869	0/0:36,0:36:99:0,105,1498	1/1:6,4:10:10.04:181,10,0	0/0:17,0:17:51.17:0,51,750	0/0:15,0:15:42.11:0,42,575	0/0:27,0:27:69.23:0,69,1014	0/0:16,0:16:42.07:0,42,535	0/0:20,0:20:60.20:0,60,867	0/0:31,0:31:93.28:0,93,1327	0/0:12,0:12:36.06:0,36,466
chr10	8235281	.	T	TGGTGC	4156.37	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=10.577;DP=586;FS=7.325;HRun=0;HaplotypeScore=113.6724;InbreedingCoeff=0.9910;MQ=90.46;MQ0=0;MQRankSum=-10.822;QD=70.45;ReadPosRankSum=-0.985;VQSLOD=4.9684;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:51.18:0,51,1173	0/0:14,0:14:42.10:0,42,842	0/0:26,0:26:66.23:0,66,1484	0/0:25,0:25:56.86:0,57,1184	1/1:4,17:22:57.19:1518,57,0	0/0:27,0:27:81.28:0,81,1886	0/0:21,0:21:63.22:0,63,1465	0/0:31,0:30:90.29:0,90,1977	0/0:14,0:14:42.13:0,42,933	0/0:28,0:27:81.28:0,81,1888	0/0:23,0:23:69.24:0,69,1604	0/0:19,0:19:57.16:0,57,1217	0/0:26,0:26:75.24:0,75,1699	0/0:23,0:23:69.24:0,69,1585	0/0:27,0:27:81.28:0,81,1888	1/1:6,17:23:66.23:1814,66,0	0/0:15,0:15:45.15:0,45,1049	1/1:0,6:6:15.02:428,15,0	0/0:20,0:20:60.20:0,60,1355	0/0:37,0:37:99:0,111,2545	1/1:4,4:8:15.05:396,15,0	0/0:17,0:17:51.18:0,51,1187	0/0:14,0:14:39.13:0,39,905	0/0:26,0:26:78.27:0,78,1808	0/0:14,0:14:42.10:0,42,881	0/0:20,0:20:60.21:0,60,1398	0/0:31,0:31:93.28:0,93,2073	0/0:12,0:12:36.12:0,36,839
chr10	8236727	.	AC	A	1247.56	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.264;DP=657;FS=0.000;HRun=1;HaplotypeScore=60.3118;InbreedingCoeff=0.9946;MQ=83.31;MQ0=0;MQRankSum=-0.239;QD=37.80;ReadPosRankSum=0.424;VQSLOD=3.9590;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:36:99:0,105,1675	0/0:16,0:16:48.16:0,48,766	0/0:21,0:21:63.21:0,63,973	0/0:19,0:18:48.13:0,48,729	0/0:22,0:22:66.23:0,66,1054	0/0:35,0:35:99:0,102,1581	0/0:18,0:18:54.18:0,54,860	0/0:39,0:39:99:0,114,1778	0/0:21,0:21:63.20:0,63,979	0/0:28,0:28:84.27:0,84,1300	0/0:22,0:22:66.21:0,66,1028	0/0:23,0:23:69.19:0,69,1032	0/0:33,0:33:96.33:0,96,1534	0/0:11,0:11:33.08:0,33,480	0/0:26,0:26:78.27:0,78,1246	0/0:13,0:13:39.13:0,39,623	0/0:23,0:23:69.24:0,69,1097	0/0:9,0:8:27.09:0,27,431	0/0:14,0:14:42.14:0,42,672	0/0:29,0:29:87.24:0,87,1318	1/1:0,33:33:96.32:1342,96,0	0/0:26,0:26:78.21:0,78,1174	0/0:24,0:24:72.24:0,72,1131	0/0:22,0:22:66.17:0,66,983	0/0:31,0:31:93.29:0,93,1441	0/0:23,0:23:69.24:0,69,1103	0/0:32,0:31:93.29:0,93,1460	0/0:7,0:7:21.07:0,21,335
chr10	8238283	.	A	AATAT	511.82	PASS	AB=0.929;AC=8;AF=0.148;AN=54;BaseQRankSum=-1.939;DP=177;FS=1.243;HRun=0;HaplotypeScore=30.5232;InbreedingCoeff=0.4046;MQ=87.50;MQ0=2;MQRankSum=1.612;QD=15.99;ReadPosRankSum=0.967;VQSLOD=2.9661;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:5:15.04:0,15,232	0/0:3,0:3:6.01:0,6,78	0/0:6,0:6:9.02:0,9,102	0/0:23,0:11:1.69:0,2,18	1/1:0,3:5:9.03:225,9,0	0/0:11,0:11:30.10:0,30,511	0/0:1,0:1:3.01:0,3,51	0/0:21,0:21:42.11:0,42,589	0/0:4,0:4:12.03:0,12,180	0/0:11,0:11:33.10:0,33,497	0/0:3,0:3:9.02:0,9,127	0/0:2,0:2:6.01:0,6,79	0/0:2,0:2:6.01:0,6,77	0/0:5,0:5:9.02:0,9,129	0/0:2,0:2:6.02:0,6,102	1/1:2,0:2:3:26,3,0	0/0:9,0:9:27.08:0,27,424	1/1:2,8:11:15.05:376,15,0	0/0:9,0:9:21.07:0,21,347	0/1:5,0:6:7:7,0,142	0/0:1,0:1:3.01:0,3,51	0/0:1,0:1:3.01:0,3,51	./.	0/0:3,0:3:9.02:0,9,128	0/0:7,0:7:15.04:0,15,216	0/1:8,0:8:2.77:3,0,263	0/0:10,0:10:24.05:0,24,356	0/0:6,0:6:12.04:0,12,205
chr10	8240459	.	G	GAA	2294.52	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-10.083;DP=655;FS=4.983;HRun=8;HaplotypeScore=73.5750;InbreedingCoeff=0.9830;MQ=73.50;MQ0=0;MQRankSum=-0.356;QD=35.85;ReadPosRankSum=1.355;VQSLOD=3.6521;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:63.14:0,63,691	0/0:21,0:21:63.17:0,63,702	0/0:14,0:14:30.06:0,30,326	0/0:13,0:14:10.51:0,11,261	1/1:3,26:31:83.72:1239,84,0	0/0:32,0:33:86.97:0,87,948	0/0:15,0:15:36.08:0,36,401	0/0:40,0:40:96.20:0,96,1062	0/0:17,0:17:48.13:0,48,535	0/0:35,0:35:90.21:0,90,992	0/0:29,0:29:75.19:0,75,836	0/0:30,0:30:72.18:0,72,801	0/0:26,0:26:75.18:0,75,826	0/0:28,0:28:78.21:0,78,870	0/0:21,0:21:60.12:0,60,651	1/1:1,19:21:44.48:675,44,0	0/0:24,0:24:63.15:0,63,702	1/1:1,11:12:33.11:523,33,0	0/0:28,0:28:75.14:0,75,811	0/0:35,0:35:90.23:0,90,1003	0/0:11,0:11:30.08:0,30,334	0/0:21,0:21:60.14:0,60,658	0/0:29,0:29:72.18:0,72,803	0/0:17,0:17:39.10:0,39,435	0/0:21,0:21:54.11:0,54,593	0/0:22,0:22:57.12:0,57,627	0/0:29,0:29:75.18:0,75,824	0/0:8,0:8:21.06:0,21,234
chr10	8240558	.	T	TTG	14005.98	PASS	AB=0.826;AC=36;AF=0.643;AN=56;BaseQRankSum=-13.796;DP=794;FS=0.000;HRun=0;HaplotypeScore=95.1970;InbreedingCoeff=0.8207;MQ=62.21;MQ0=11;MQRankSum=0.198;QD=26.23;ReadPosRankSum=1.193;VQSLOD=5.8464;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:81.24:0,81,951	1/1:3,13:16:0.57:487,1,0	0/0:31,0:17:27.55:0,28,316	0/1:22,0:13:5.27:5,0,157	1/1:13,28:40:72.72:1138,73,0	1/1:8,19:26:12.61:678,13,0	1/1:7,11:18:27.09:428,27,0	1/1:7,21:28:21.69:854,22,0	1/1:4,13:18:14.01:456,14,0	0/0:41,0:41:99:0,102,1200	0/0:25,0:25:54.16:0,54,640	1/1:8,16:24:42.14:645,42,0	1/1:8,15:23:39.13:612,39,0	1/1:3,27:29:57.19:897,57,0	0/0:27,0:27:63.18:0,63,734	1/1:5,29:34:39.70:1104,40,0	0/1:13,14:28:40.91:436,0,41	1/1:8,8:16:24.08:380,24,0	1/1:15,13:28:41.78:580,42,0	1/1:5,43:48:99:1591,105,0	0/0:19,0:19:36.11:0,36,426	0/0:23,0:23:54.16:0,54,640	0/0:35,0:35:75.22:0,75,880	0/0:19,0:19:33.09:0,33,382	1/1:8,22:30:54.18:856,54,0	1/1:9,26:34:45.69:1162,46,0	1/1:13,29:44:78.24:1191,78,0	1/1:8,12:20:33.11:505,33,0
chr10	8242793	.	AGAGG	A	213.56	PASS	AB=0.958;AC=16;AF=0.320;AN=50;BaseQRankSum=-1.975;DP=312;FS=53.665;HRun=0;HaplotypeScore=61.6933;InbreedingCoeff=-0.0958;MQ=28.76;MQ0=89;MQRankSum=4.981;QD=1.32;ReadPosRankSum=-1.244;VQSLOD=-0.5732;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:8:6.40:0,6,14	0/1:5,0:5:32.42:32,0,85	./.	./.	./.	0/1:12,0:8:17.14:17,0,27	0/1:19,0:13:17.59:18,0,48	0/0:28,0:26:2.85:0,3,95	0/1:8,0:5:8.87:78,0,9	0/0:24,0:21:21.59:0,22,131	0/0:4,0:3:2.92:0,3,17	0/1:8,2:8:17.71:33,0,18	0/1:10,0:6:3.61:4,0,13	0/0:10,0:9:5.26:0,5,22	0/0:9,0:6:2.01:0,2,5	1/1:11,0:8:6.46:50,6,0	0/0:10,0:4:2.97:0,3,20	1/1:9,0:4:2.99:24,3,0	0/1:16,0:10:0.18:0,0,16	0/0:10,0:9:5.10:0,5,14	1/1:14,0:7:2.03:24,2,0	0/0:12,0:8:3.02:0,3,6	0/0:7,0:6:5.67:0,6,34	0/1:25,0:15:33.07:33,0,36	0/0:7,0:6:5.06:0,5,22	0/1:14,0:10:25.46:25,0,64	0/1:6,3:9:6.36:6,0,37	0/0:10,0:2:1.25:0,1,3
chr10	8243109	.	GA	G	4529.52	PASS	AB=0.919;AC=38;AF=0.679;AN=56;BaseQRankSum=7.067;DP=536;FS=3.024;HRun=12;HaplotypeScore=66.0904;InbreedingCoeff=0.8050;MQ=73.99;MQ0=2;MQRankSum=1.181;QD=12.05;ReadPosRankSum=2.989;VQSLOD=4.9498;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:23:60.04:0,60,583	1/1:0,9:9:20.92:163,21,0	0/0:12,0:11:14.87:0,15,113	0/1:14,1:14:10.41:10,0,45	1/1:3,0:27:34.36:99,34,0	1/1:8,16:26:39.90:290,40,0	1/1:5,12:17:35.84:279,36,0	1/1:6,20:26:23.29:364,23,0	1/1:3,15:18:42.24:344,42,0	0/0:37,0:41:96.07:0,96,924	0/1:16,2:18:10.38:10,0,259	1/1:4,16:20:34.65:260,35,0	1/1:2,12:14:32.86:255,33,0	1/1:2,7:9:20.91:162,21,0	0/0:17,0:17:29.35:0,29,272	1/1:3,1:23:33.54:111,34,0	1/1:4,15:19:20.54:281,21,0	1/1:1,0:12:22.41:65,22,0	1/1:9,13:22:41.75:318,42,0	1/1:4,18:22:44.79:346,45,0	0/0:18,1:19:24.87:0,25,415	0/0:13,2:15:15.80:0,16,325	0/0:17,0:17:40.46:0,40,405	0/0:13,0:15:32.74:0,33,303	1/1:3,12:15:32.86:255,33,0	1/1:7,13:21:13.41:274,13,0	1/1:7,19:27:0.91:363,1,0	1/1:2,14:16:35.84:279,36,0
chr10	8244490	.	CA	C	2073.59	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=9.933;DP=345;FS=8.872;HRun=5;HaplotypeScore=31.4642;InbreedingCoeff=0.8644;MQ=70.72;MQ0=0;MQRankSum=-1.846;QD=28.02;ReadPosRankSum=2.451;VQSLOD=2.7581;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:39.10:0,39,500	0/0:5,0:5:15.05:0,15,205	0/0:7,0:7:20.43:0,20,245	0/1:4,0:4:13.79:14,0,47	0/0:20,0:20:57.19:0,57,779	0/0:12,0:11:36.10:0,36,474	0/0:5,0:5:12.04:0,12,164	0/0:32,0:32:90.28:0,90,1189	0/0:8,0:8:21.07:0,21,287	1/1:0,18:18:54.15:613,54,0	1/1:1,27:28:78.22:885,78,0	0/0:5,0:5:12.03:0,12,148	0/0:9,0:9:27.09:0,27,363	0/0:14,0:14:42.14:0,42,574	1/1:0,7:7:21.06:238,21,0	0/0:12,0:12:30.09:0,30,395	0/0:24,0:24:65.95:0,66,899	0/0:9,0:9:24.08:0,24,328	0/0:17,0:17:48.13:0,48,637	0/0:12,0:12:36.11:0,36,476	0/0:4,0:4:12.04:0,12,164	1/1:0,5:5:15.04:170,15,0	1/1:1,6:7:18.05:204,18,0	1/1:0,5:5:12.03:136,12,0	0/0:16,0:16:48.16:0,48,657	0/0:22,1:23:35.16:0,35,824	0/0:20,0:20:60.18:0,60,803	0/0:4,0:4:12.01:0,12,144
chr10	8245109	.	T	TAAAG	39206.49	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-12.069;DP=753;FS=2.785;HRun=0;HaplotypeScore=104.4885;InbreedingCoeff=0.9990;MQ=90.93;MQ0=0;MQRankSum=-10.156;QD=61.55;ReadPosRankSum=6.594;VQSLOD=6.1634;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,141,2726	1/1:0,9:10:27.09:743,27,0	0/0:34,0:34:90.56:0,91,1600	0/0:34,0:34:95.93:0,96,1563	1/1:1,28:29:75.05:1667,75,0	1/1:0,18:19:48.16:1328,48,0	1/1:3,29:34:72.72:2004,73,0	1/1:3,24:32:87.19:1817,87,0	1/1:0,27:29:72.25:2010,72,0	1/1:2,25:30:84.27:2068,84,0	1/1:0,23:24:50.96:1065,51,0	1/1:0,23:25:53.99:1507,54,0	1/1:3,23:28:60.07:1604,60,0	1/1:1,29:31:63.22:1755,63,0	1/1:0,38:41:93.32:2598,93,0	1/1:2,27:29:57.20:1591,57,0	1/1:2,33:36:81.21:2197,81,0	1/1:1,17:18:45.15:1212,45,0	1/1:0,21:24:72.18:1685,72,0	1/1:0,19:20:54.13:1443,54,0	1/1:0,28:29:75.08:1840,75,0	1/1:0,21:24:57.36:1206,57,0	1/1:0,14:14:30.02:709,30,0	1/1:0,32:34:69.21:1927,69,0	1/1:0,15:16:33.07:858,33,0	1/1:1,28:31:90.29:2348,90,0	1/1:1,18:19:48.16:1338,48,0	1/1:0,10:10:27.05:690,27,0
chr10	8246421	.	A	AT	6446.18	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-13.159;DP=530;FS=2.988;HRun=7;HaplotypeScore=45.4490;InbreedingCoeff=0.9843;MQ=72.61;MQ0=0;MQRankSum=-2.078;QD=32.07;ReadPosRankSum=2.472;VQSLOD=4.7092;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:57.06:0,57,542	0/0:6,0:6:15.02:0,15,145	0/0:11,0:11:27.03:0,27,254	0/0:6,0:6:12:0,12,109	1/1:3,24:29:81.19:948,81,0	0/0:25,0:25:69.08:0,69,655	0/0:14,0:14:36.05:0,36,347	0/0:26,0:26:63.08:0,63,605	0/0:20,0:20:57.06:0,57,539	1/1:6,36:42:99:1325,111,0	1/1:1,29:30:84.26:1015,84,0	0/0:16,0:16:39.06:0,39,376	0/0:22,0:22:60.10:0,60,579	0/0:15,0:15:42.07:0,42,406	1/1:1,14:15:42.13:507,42,0	1/1:2,21:23:57.17:689,57,0	0/0:13,0:13:39.05:0,39,371	1/1:3,17:20:45.14:543,45,0	0/0:17,0:17:45.05:0,45,424	0/0:23,0:23:60.08:0,60,574	0/0:9,0:9:24.04:0,24,232	1/1:1,10:11:33.10:397,33,0	1/1:0,17:17:51.16:616,51,0	1/1:1,13:14:10.19:406,10,0	0/0:21,0:21:57.09:0,57,550	0/0:25,0:25:72.10:0,72,688	0/0:30,0:30:84.12:0,84,804	0/0:9,0:9:21.03:0,21,203
chr10	8247131	.	TG	T	772.74	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=8.670;DP=500;FS=8.444;HRun=3;HaplotypeScore=58.1787;InbreedingCoeff=0.8324;MQ=66.27;MQ0=12;MQRankSum=3.219;QD=5.56;ReadPosRankSum=-0.701;VQSLOD=-0.3750;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:17.81:0,18,132	0/0:9,0:9:17.98:0,18,149	0/1:38,0:13:4.27:4,0,107	0/0:13,0:5:11.82:0,12,96	0/0:23,0:25:47.59:0,48,387	0/0:21,0:21:36.99:0,37,366	0/0:12,0:12:27.05:0,27,280	0/0:28,0:27:55.94:0,56,440	0/0:13,0:13:32.85:0,33,269	1/1:20,0:20:2.07:213,2,0	1/1:20,0:20:30.13:215,30,0	0/0:19,0:19:47.88:0,48,408	0/0:17,0:16:35.80:0,36,285	0/0:20,0:20:50.49:0,50,449	1/1:3,12:15:4.78:19,5,0	0/0:15,0:15:27.01:0,27,273	0/0:17,0:17:44.54:0,45,364	0/0:18,0:18:26.10:0,26,267	0/0:22,0:18:53.80:0,54,440	0/0:18,0:18:41.40:0,41,321	0/0:8,0:8:20.94:0,21,181	1/1:19,0:19:25.73:241,26,0	1/1:16,0:16:22.61:185,23,0	1/1:10,0:10:11.90:67,12,0	0/0:17,0:16:38.95:0,39,331	0/0:21,0:21:39.65:0,40,340	0/0:22,0:21:38.68:0,39,309	0/0:5,0:4:11.95:0,12,94
chr10	8252124	.	CTCTT	C	1290.18	PASS	AB=1.000;AC=34;AF=0.654;AN=52;BaseQRankSum=-3.391;DP=480;FS=5.439;HRun=0;HaplotypeScore=116.6840;InbreedingCoeff=0.0305;MQ=45.51;MQ0=14;MQRankSum=-0.160;QD=3.15;ReadPosRankSum=-6.186;VQSLOD=-0.3414;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:23.93:0,24,347	0/0:9,0:8:2.55:0,3,24	./.	0/1:32,0:7:2.18:2,0,39	0/0:12,0:12:1.63:0,2,21	0/1:23,0:23:27.03:27,0,48	1/1:31,0:29:11.20:83,11,0	1/1:26,0:25:15.15:73,15,0	0/1:19,0:19:2.86:34,0,3	1/1:12,0:10:29.56:236,30,0	./.	0/1:19,0:19:19.82:20,0,62	0/1:23,0:23:42.90:70,0,43	1/1:11,0:11:5.99:40,6,0	1/1:10,0:10:12.43:127,12,0	0/1:21,0:21:2.79:58,0,3	0/1:26,0:26:1.42:16,0,1	0/0:8,0:8:3.02:0,3,19	0/1:11,0:10:14.76:40,0,15	1/1:14,0:14:2.89:19,3,0	1/1:17,1:17:0.46:30,0,0	1/1:10,0:10:19.82:185,20,0	1/1:16,0:16:14.26:171,14,0	1/1:6,0:7:0:39,0,0	1/1:25,0:24:11.42:68,11,0	0/1:22,0:22:18.25:47,0,18	0/1:25,0:25:25.88:49,0,26	1/1:7,0:7:0.37:1,0,0
chr10	8252132	.	C	CTCTT	86.52	PASS	AB=1.000;AC=18;AF=0.429;AN=42;BaseQRankSum=-0.925;DP=465;FS=0.000;HRun=0;HaplotypeScore=128.3449;InbreedingCoeff=0.2128;MQ=46.22;MQ0=14;MQRankSum=-4.085;QD=0.35;ReadPosRankSum=2.034;VQSLOD=1.8623;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	./.	0/0:24,0:24:0.66:0,1,26	0/1:25,0:23:0:0,0,0	0/1:27,0:24:0:0,0,0	1/1:21,0:21:5.50:39,5,0	0/0:12,0:10:4.47:0,4,79	./.	0/1:19,0:19:12.76:23,0,13	1/1:24,0:24:5.31:13,5,0	0/0:10,0:10:5.78:0,6,31	0/0:14,0:14:11.95:0,12,95	1/1:17,0:17:3.01:37,3,0	1/1:25,0:25:3.40:22,3,0	0/0:7,0:8:2.94:0,3,18	0/0:15,0:12:4.55:0,5,29	./.	1/1:15,0:14:2.60:10,3,0	0/0:11,0:11:10.36:0,10,101	0/1:16,0:16:7.41:7,0,107	0/0:9,0:9:8.23:0,8,69	0/0:23,0:22:5.43:0,5,32	0/1:23,0:23:10.75:11,0,46	0/1:25,0:25:10.60:11,0,26	1/1:7,0:7:3.01:39,3,0
chr10	8252170	.	CTTTCTTTCTTTG	C	4211.68	PASS	AB=1.000;AC=34;AF=0.607;AN=56;BaseQRankSum=-4.531;DP=397;FS=11.061;HRun=0;HaplotypeScore=117.4420;InbreedingCoeff=0.2623;MQ=54.07;MQ0=13;MQRankSum=-0.134;QD=13.54;ReadPosRankSum=-5.799;VQSLOD=0.2539;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:14.88:0,15,204	1/1:7,0:6:2.92:17,3,0	0/0:4,0:3:8.60:0,9,71	0/0:3,0:2:0.47:0,0,1	1/1:1,12:13:29.39:177,29,0	1/1:22,0:22:6.02:146,6,0	1/1:17,0:15:23.86:346,24,0	1/1:20,0:19:38.46:295,38,0	0/0:14,0:14:2.50:0,2,9	0/1:18,0:16:78.50:192,0,79	0/1:8,0:8:26.14:74,0,26	0/1:13,0:13:8.13:308,0,8	0/1:20,0:20:26.11:80,0,26	1/1:8,0:8:6.02:141,6,0	0/1:13,0:13:43:43,0,178	1/1:12,0:12:2.74:12,3,0	1/1:29,0:28:67.66:693,68,0	0/0:6,0:6:0.54:0,1,2	1/1:9,0:7:12.02:269,12,0	1/1:19,0:19:36.47:233,36,0	1/1:9,0:9:23.72:165,24,0	0/0:11,0:11:0.06:0,0,243	0/0:15,0:13:3.20:0,3,212	0/1:7,0:7:12.97:13,0,80	1/1:22,0:21:9.03:173,9,0	1/1:23,0:23:50.57:617,51,0	1/1:22,0:22:14.81:218,15,0	0/0:5,0:1:2.84:0,3,14
chr10	8252174	.	CTTTCTTTG	C	4767.64	PASS	AB=1.000;AC=48;AF=0.857;AN=56;BaseQRankSum=-0.643;DP=395;FS=0.851;HRun=0;HaplotypeScore=91.4157;InbreedingCoeff=0.4519;MQ=56.33;MQ0=11;MQRankSum=-1.246;QD=13.28;ReadPosRankSum=-1.564;VQSLOD=3.3105;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:20.86:0,21,207	1/1:2,4:5:2.92:17,3,0	0/0:5,0:4:11.55:0,12,88	0/0:6,0:4:6.49:0,6,70	1/1:13,0:13:29.39:177,29,0	1/1:3,19:22:9.39:155,9,0	1/1:15,0:13:23.93:300,24,0	1/1:21,0:20:41.64:323,42,0	1/1:17,0:17:5.50:38,5,0	1/1:17,0:16:26.37:270,26,0	1/1:9,0:9:11.49:112,11,0	1/1:11,0:11:28.61:296,29,0	1/1:5,12:17:9.83:79,10,0	1/1:1,8:9:6.02:143,6,0	1/1:13,0:13:4.77:149,5,0	1/1:1,12:13:3.01:72,3,0	1/1:29,0:28:76.27:698,76,0	1/1:6,0:6:9.41:68,9,0	1/1:9,0:6:12.51:217,13,0	1/1:4,18:22:41.21:254,41,0	1/1:8,1:9:23.76:182,24,0	0/1:11,0:11:7.17:54,0,7	1/1:15,0:13:12.44:136,12,0	1/1:7,0:7:6.38:49,6,0	1/1:4,17:20:9.91:174,10,0	1/1:22,0:22:57.68:579,58,0	0/1:21,0:21:16.61:185,0,17	1/1:4,0:1:3.01:39,3,0
chr10	8252178	.	CTTTG	C	3915.73	PASS	AB=0.919;AC=45;AF=0.804;AN=56;BaseQRankSum=-0.512;DP=387;FS=0.000;HRun=0;HaplotypeScore=73.4509;InbreedingCoeff=0.2603;MQ=57.27;MQ0=9;MQRankSum=-0.900;QD=11.19;ReadPosRankSum=-1.704;VQSLOD=2.3715;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:23.76:0,24,207	1/1:6,0:5:2.92:17,3,0	0/0:7,0:6:17.23:0,17,129	0/0:6,0:4:6.02:0,6,69	1/1:13,0:13:29.39:177,29,0	0/1:22,0:22:0.72:66,0,1	1/1:12,0:11:23.89:232,24,0	1/1:23,0:23:37.72:382,38,0	1/1:2,15:17:6.07:41,6,0	1/1:5,12:16:24.15:320,24,0	1/1:9,0:9:18.38:147,18,0	1/1:11,0:11:6.30:176,6,0	1/1:17,0:17:0.09:51,0,0	1/1:8,0:8:6.02:71,6,0	0/1:13,0:13:33.47:99,0,33	1/1:13,0:13:3.01:37,3,0	1/1:29,0:28:68.29:586,68,0	1/1:5,0:5:10.16:63,10,0	1/1:9,0:6:12.91:138,13,0	1/1:20,0:20:41.23:254,41,0	1/1:8,0:8:23.73:167,24,0	0/1:10,0:10:21:35,0,21	1/1:17,0:15:2.32:163,2,0	0/1:6,0:6:35.84:41,0,36	1/1:18,0:18:8.61:81,9,0	1/1:2,21:23:55.64:467,56,0	0/1:6,13:19:30.35:62,0,30	1/1:5,0:2:5.95:43,6,0
chr10	8252372	.	AAC	A	11993.94	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=6.783;DP=500;FS=0.000;HRun=0;HaplotypeScore=162.5228;InbreedingCoeff=0.9540;MQ=70.87;MQ0=1;MQRankSum=-7.951;QD=30.75;ReadPosRankSum=3.998;VQSLOD=6.5378;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:92.99:0,93,1430	1/1:3,0:3:6.02:77,6,0	0/0:37,1:33:61.13:0,61,746	0/0:28,0:22:37.12:0,37,459	1/1:1,21:22:63.11:781,63,0	1/1:16,9:25:66.19:826,66,0	1/1:0,8:8:18.06:238,18,0	1/1:6,19:25:60.08:663,60,0	1/1:6,5:11:30.08:366,30,0	1/1:4,23:27:66.14:800,66,0	1/1:1,6:7:17.96:198,18,0	1/1:10,6:16:48.10:570,48,0	1/1:14,3:17:45.04:569,45,0	1/1:9,2:11:24.07:292,24,0	1/1:4,10:14:42.11:516,42,0	1/1:1,21:22:51.17:678,51,0	1/1:12,2:14:32.97:352,33,0	1/1:0,8:8:24.08:318,24,0	1/1:14,9:23:45.23:680,45,0	1/1:12,6:18:45.02:495,45,0	0/0:10,0:10:10.74:0,11,52	1/1:4,15:19:39:459,39,0	1/1:1,16:17:30.04:378,30,0	1/1:3,17:20:45.14:585,45,0	1/1:10,6:15:36.11:457,36,0	1/1:9,10:19:54.16:684,54,0	1/1:14,4:18:51.12:621,51,0	1/1:7,3:10:30.10:391,30,0
chr10	8252378	.	CACAA	C	7044.77	PASS	AB=1.000;AC=35;AF=0.625;AN=56;BaseQRankSum=8.078;DP=485;FS=8.897;HRun=0;HaplotypeScore=195.9149;InbreedingCoeff=0.7525;MQ=70.94;MQ0=1;MQRankSum=-11.164;QD=23.80;ReadPosRankSum=4.177;VQSLOD=3.7502;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,100,2456	1/1:0,2:2:6.02:83,6,0	0/0:38,0:34:87.60:0,88,1453	0/0:26,0:20:32.08:0,32,720	0/1:26,0:26:42.17:42,0,95	1/1:11,12:23:66.04:801,66,0	1/1:8,0:8:17.91:135,18,0	1/1:24,3:27:34.30:595,34,0	1/1:5,5:10:30.06:415,30,0	0/0:26,0:26:33.95:0,34,248	0/0:7,0:7:9.90:0,10,32	1/1:10,7:17:46.76:541,47,0	1/1:4,13:17:44.12:591,44,0	1/1:3,5:8:24.06:297,24,0	0/0:14,0:14:9.34:0,9,103	1/1:21,0:21:33.70:116,34,0	1/1:7,5:12:32.95:390,33,0	0/1:10,0:10:3.13:46,0,3	1/1:21,5:26:14.40:562,14,0	1/1:10,5:15:44.63:458,45,0	0/0:9,0:9:19.52:0,20,204	0/1:15,0:15:7.42:7,0,80	0/0:16,0:16:5.41:0,5,51	0/0:17,0:18:18.20:0,18,90	1/1:7,6:12:35.84:371,36,0	1/1:11,7:18:45.33:585,45,0	1/1:8,10:17:51.09:626,51,0	1/1:3,7:10:30.06:382,30,0
chr10	8252380	.	CA	C	298.27	PASS	AB=1.000;AC=28;AF=0.500;AN=56;BaseQRankSum=11.608;DP=477;FS=0.000;HRun=10;HaplotypeScore=195.0054;InbreedingCoeff=0.6711;MQ=70.97;MQ0=1;MQRankSum=-10.777;QD=1.36;ReadPosRankSum=1.150;VQSLOD=0.0418;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,3:35:38.58:0,39,865	1/1:2,0:2:3.85:11,4,0	0/0:37,0:32:45.05:0,45,429	0/0:23,1:18:5.68:0,6,258	0/0:27,0:27:19.81:0,20,116	1/1:22,0:22:17.69:54,18,0	0/0:8,0:8:2.83:0,3,6	0/1:26,0:26:4.98:5,0,32	1/1:10,0:10:12.04:39,12,0	0/0:24,0:24:27.33:0,27,135	0/0:7,0:7:6.55:0,7,40	1/1:17,0:17:9.80:31,10,0	1/1:17,0:17:22.50:66,23,0	1/1:8,0:8:7.51:22,8,0	0/0:15,0:15:18.51:0,19,73	0/0:21,0:21:13.40:0,13,26	1/1:12,0:12:10.52:30,11,0	0/0:10,0:10:6.13:0,6,19	0/1:25,0:25:20.89:21,0,27	1/1:14,0:14:6.32:21,6,0	1/1:7,2:9:9.60:61,10,0	0/0:15,0:15:11.87:0,12,51	0/0:16,0:16:7.97:0,8,16	0/0:19,0:19:2.55:0,3,13	1/1:13,0:12:9.54:28,10,0	1/1:18,0:18:6.63:25,7,0	1/1:16,0:15:17.54:53,18,0	1/1:10,0:10:9.91:29,10,0
chr10	8252392	.	C	CCCCTCAGTTCTAAT	42117	PASS	AB=0.786;AC=31;AF=0.554;AN=56;BaseQRankSum=-2.226;DP=542;FS=8.609;HRun=0;HaplotypeScore=276.5675;InbreedingCoeff=0.9150;MQ=61.71;MQ0=1;MQRankSum=-16.876;QD=141.33;ReadPosRankSum=-1.097;VQSLOD=3.3524;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:96.33:0,96,3854	1/1:1,2:3:9.03:604,9,0	0/0:27,0:23:40.36:0,40,1395	0/0:20,0:15:27.89:0,28,688	0/0:28,0:28:84.10:0,84,2761	1/1:15,12:27:78.06:3984,78,0	1/1:10,0:10:30.10:1360,30,0	1/1:34,0:34:93.10:4805,93,0	1/1:12,4:16:47.63:1963,48,0	0/0:28,0:28:81.28:0,81,3141	0/0:8,0:8:21.07:0,21,809	1/1:12,7:20:60.13:2808,60,0	1/1:13,12:27:77.83:4232,78,0	1/1:9,5:14:42.14:1772,42,0	0/0:18,0:18:48.15:0,48,1810	0/0:20,0:20:53.47:0,53,1676	1/1:10,4:14:42.04:2395,42,0	0/0:10,0:10:19.87:0,20,782	1/1:25,3:29:77.78:3080,78,0	1/1:15,4:19:48.16:1887,48,0	1/1:3,0:9:13.28:540,13,0	0/0:12,0:12:36.11:0,36,1174	0/0:17,0:17:42.13:0,42,1572	0/0:21,0:21:57.20:0,57,2288	1/1:16,5:21:63.21:3726,63,0	0/1:16,6:22:65.59:3328,0,66	1/1:12,9:21:66.12:3719,66,0	1/1:3,7:10:30.10:1911,30,0
chr10	8252442	.	T	TC	7860.30	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-12.324;DP=544;FS=0.000;HRun=7;HaplotypeScore=105.8803;InbreedingCoeff=0.9784;MQ=85.74;MQ0=0;MQRankSum=-8.899;QD=29.00;ReadPosRankSum=1.255;VQSLOD=4.2466;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:81.11:0,81,777	1/1:1,8:8:15.05:181,15,0	0/0:23,0:23:55.57:0,56,514	0/0:27,0:27:55.29:0,55,490	0/0:33,0:33:90.14:0,90,868	1/1:3,15:18:45.14:543,45,0	1/1:3,17:20:44.93:505,45,0	1/1:8,15:24:41.99:484,42,0	1/1:0,16:16:48.15:580,48,0	0/0:25,0:25:69.10:0,69,666	0/0:13,0:13:39.06:0,39,376	1/1:2,16:18:48.15:576,48,0	1/1:5,20:25:60.18:724,60,0	1/1:1,18:19:51.16:616,51,0	0/0:23,0:23:69.09:0,69,661	0/0:25,0:25:66.11:0,66,636	1/1:1,16:17:39.12:471,39,0	0/0:7,0:7:20.98:0,21,193	1/1:3,24:26:69.21:830,69,0	1/1:1,11:12:30.09:362,30,0	0/0:11,0:11:12:0,12,110	0/0:11,0:11:30.05:0,30,289	0/0:17,0:17:39.06:0,39,376	0/0:27,0:27:66.09:0,66,637	1/1:1,19:20:54.17:652,54,0	1/1:2,17:19:51.16:615,51,0	1/1:5,19:24:31.20:649,31,0	1/1:1,2:3:6.02:71,6,0
chr10	8252908	.	GA	G	290.46	PASS	AB=0.935;AC=3;AF=0.054;AN=56;BaseQRankSum=4.146;DP=572;FS=0.850;HRun=9;HaplotypeScore=70.2201;InbreedingCoeff=0.6435;MQ=79.11;MQ0=1;MQRankSum=-0.303;QD=6.60;ReadPosRankSum=-2.627;VQSLOD=0.8129;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,111,1271	0/0:11,0:11:30.09:0,30,346	0/1:27,2:24:39.67:40,0,439	0/0:23,0:18:26.71:0,27,270	0/0:14,0:14:39.09:0,39,432	0/0:20,0:20:51.15:0,51,588	0/0:9,0:10:26.91:0,27,291	0/0:26,1:27:38.71:0,39,688	0/0:19,0:19:51.15:0,51,587	0/0:23,0:23:60.16:0,60,681	0/0:19,0:19:54.16:0,54,623	0/0:22,1:23:32.71:0,33,622	0/0:26,0:27:69.03:0,69,772	0/0:26,0:26:63.13:0,63,711	0/0:22,0:22:57.16:0,57,650	0/0:28,0:28:75.21:0,75,856	0/0:18,0:18:51.15:0,51,589	0/0:8,0:8:24.07:0,24,277	0/0:14,0:14:42.12:0,42,485	0/0:21,0:21:57.16:0,57,649	1/1:2,13:15:39.02:357,39,0	0/0:21,0:21:57.15:0,57,642	0/0:18,0:19:53.99:0,54,603	0/0:16,0:16:48.14:0,48,554	0/0:13,0:13:36.09:0,36,406	0/0:32,0:32:84.24:0,84,956	0/0:25,0:25:69.21:0,69,796	0/0:7,0:7:21.06:0,21,242
chr10	8252976	.	TACACACACAC	T	1212.28	PASS	AC=10;AF=0.192;AN=52;BaseQRankSum=4.325;DP=538;FS=1.006;HRun=0;HaplotypeScore=175.5901;InbreedingCoeff=0.8564;MQ=53.50;MQ0=20;MQRankSum=-2.645;QD=12.25;ReadPosRankSum=-0.326;VQSLOD=2.5653;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:37:51.18:0,51,1845	0/0:3,0:3:3.01:0,3,74	./.	0/0:22,0:4:0.47:0,0,1	0/0:17,0:18:18.06:0,18,483	0/0:13,0:12:15.05:0,15,527	0/0:22,0:20:17.27:0,17,738	0/0:31,0:31:15.28:0,15,168	0/0:13,0:14:27.09:0,27,1092	1/1:22,0:24:12.31:220,12,0	1/1:12,0:16:6.01:113,6,0	0/0:25,0:25:45.15:0,45,1616	0/0:19,0:20:32.60:0,33,1113	0/0:20,0:21:33.09:0,33,1103	1/1:9,9:19:18.06:532,18,0	0/0:15,0:19:27.07:0,27,750	0/0:20,0:21:24.08:0,24,891	0/0:6,0:9:15.05:0,15,421	0/0:17,0:17:14.17:0,14,455	0/0:15,0:14:24.08:0,24,972	0/0:25,0:24:27.09:0,27,887	1/1:16,3:18:9.03:218,9,0	1/1:15,5:20:14.99:285,15,0	./.	0/0:19,0:22:39.13:0,39,1471	0/0:24,0:23:41.51:0,42,1420	0/0:13,0:13:33.11:0,33,1246	0/0:13,0:12:24:0,24,893
chr10	8253993	.	A	ATG	12585.70	PASS	AB=0.560;AC=17;AF=0.304;AN=56;BaseQRankSum=-15.356;DP=957;FS=3.362;HRun=0;HaplotypeScore=132.6912;InbreedingCoeff=0.8776;MQ=62.34;MQ0=3;MQRankSum=0.042;QD=37.57;ReadPosRankSum=2.215;VQSLOD=6.7124;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:37:92.68:0,93,1046	0/0:12,0:12:33.11:0,33,412	0/0:36,0:20:8.16:0,8,219	0/0:36,1:25:17.35:0,17,222	1/1:4,43:46:82.88:1894,83,0	0/0:28,0:28:69.14:0,69,828	0/0:24,0:24:63.14:0,63,756	0/0:45,0:45:99:0,105,1302	0/0:35,0:35:99:0,99,1214	1/1:10,49:59:99:2293,155,0	1/1:6,28:34:78.27:1288,78,0	0/0:47,0:47:99:0,135,1685	0/0:45,0:45:99:0,132,1649	0/0:38,0:38:99:0,99,1225	1/1:5,44:49:99:1830,111,0	1/1:4,40:45:99:1783,108,0	0/0:25,0:25:66.13:0,66,790	1/1:6,11:17:3.59:559,4,0	0/0:15,0:15:27.08:0,27,338	0/0:31,0:31:81.26:0,81,1013	0/0:48,0:49:99:0,132,1582	0/1:6,21:28:8.84:914,0,9	1/1:4,19:24:51.17:842,51,0	1/1:6,24:30:72.24:1182,72,0	0/0:41,0:41:99:0,102,1276	0/0:41,1:42:67.80:0,68,1365	0/0:32,0:32:84.25:0,84,1037	0/0:3,0:3:9.03:0,9,109
chr10	8254186	.	GGT	G	22651.99	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=8.666;DP=1008;FS=7.360;HRun=0;HaplotypeScore=300.4076;InbreedingCoeff=0.9065;MQ=59.89;MQ0=11;MQRankSum=3.613;QD=25.65;ReadPosRankSum=4.855;VQSLOD=4.4923;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,1:48:64.43:0,64,1585	1/1:1,7:7:18.06:227,18,0	0/0:36,0:20:30.43:0,30,422	0/0:41,0:23:10.95:0,11,557	1/1:2,29:31:54.17:681,54,0	1/1:5,21:25:59.40:726,59,0	1/1:10,22:33:40.20:659,40,0	1/1:12,50:62:99:1746,128,0	1/1:7,49:52:95.85:1417,96,0	1/1:12,39:51:99:1433,114,0	1/1:1,19:19:41.96:530,42,0	1/1:9,48:56:99:1495,120,0	1/1:9,49:57:99:1664,132,0	1/1:8,40:46:99:1325,105,0	1/1:14,51:65:99:1627,129,0	1/1:6,44:49:99:1550,123,0	1/1:8,11:18:16.75:362,17,0	1/1:6,5:12:17.68:201,18,0	1/1:8,15:22:42.13:522,42,0	1/1:8,24:32:54:682,54,0	1/1:19,26:45:41.58:666,42,0	1/1:4,18:22:1.90:487,2,0	1/1:0,19:19:36.11:455,36,0	1/1:9,35:40:78.25:985,78,0	1/1:2,23:25:51.16:644,51,0	1/1:6,36:42:99:1321,105,0	1/1:0,28:28:78.25:984,78,0	1/1:0,7:7:21.07:265,21,0
chr10	8254252	.	ATG	A	1132.59	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.851;DP=1190;FS=0.000;HRun=0;HaplotypeScore=309.6959;InbreedingCoeff=0.9839;MQ=55.59;MQ0=10;MQRankSum=0.166;QD=16.90;ReadPosRankSum=0.586;VQSLOD=3.0413;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:68,0:68:99:0,167,2715	0/0:11,0:11:33.10:0,33,518	0/0:65,0:30:54.63:0,55,856	0/0:63,0:35:41.13:0,41,984	0/0:47,0:47:99:0,111,1845	0/0:23,0:23:48.15:0,48,784	0/0:37,0:37:78.23:0,78,1252	0/0:51,0:50:99:0,123,1930	0/0:53,0:53:99:0,144,2358	0/0:59,0:59:99:0,147,2387	0/0:31,0:31:78.26:0,78,1307	0/0:53,0:53:99:0,111,2120	0/0:49,0:49:99:0,114,1789	0/0:55,1:56:99:0,105,2228	0/0:57,0:57:99:0,147,2382	0/0:53,0:52:99:0,147,2410	0/0:35,0:35:90.04:0,90,1450	0/0:23,0:23:41.91:0,42,718	0/0:16,0:15:33.11:0,33,557	0/0:48,0:48:99:0,135,2197	1/1:5,62:67:88.48:1227,88,0	0/0:35,0:35:84.29:0,84,1412	0/0:23,0:23:54.18:0,54,913	0/0:44,0:44:99:0,108,1752	0/0:35,0:35:84.26:0,84,1372	0/0:47,0:46:99:0,129,2151	0/0:32,1:33:39.30:0,39,1212	0/0:6,0:6:15.05:0,15,250
chr10	8254512	.	TAA	T	15565.59	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=5.788;DP=571;FS=9.114;HRun=8;HaplotypeScore=170.3533;InbreedingCoeff=0.9513;MQ=62.93;MQ0=0;MQRankSum=-3.119;QD=29.88;ReadPosRankSum=3.074;VQSLOD=3.3823;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:72.25:0,72,1210	1/1:1,5:6:12.03:146,12,0	0/0:14,0:14:15.67:0,16,187	0/0:10,0:10:21.02:0,21,262	1/1:6,28:34:78.18:928,78,0	1/1:2,19:21:45.14:549,45,0	1/1:0,19:19:57.18:695,57,0	1/1:6,26:32:75.18:878,75,0	1/1:4,17:21:51.15:622,51,0	1/1:2,17:19:54.16:646,54,0	1/1:2,29:31:81.24:978,81,0	1/1:3,14:17:36.10:435,36,0	1/1:1,21:22:54.17:659,54,0	1/1:2,11:13:27.08:329,27,0	1/1:3,30:33:78.23:948,78,0	1/1:5,21:26:60.18:732,60,0	1/1:3,18:21:48.15:585,48,0	1/1:2,3:5:9.03:110,9,0	1/1:1,13:14:39.10:462,39,0	1/1:1,32:33:90.27:1097,90,0	1/1:0,6:6:12.04:146,12,0	1/1:2,20:22:54.16:649,54,0	1/1:1,26:27:66.20:805,66,0	1/1:0,12:12:30.09:366,30,0	1/1:2,26:28:75.23:911,75,0	1/1:1,25:26:72.19:864,72,0	1/1:1,21:22:57.18:695,57,0	1/1:0,11:11:27.08:329,27,0
chr10	8254901	.	C	CA	18554.19	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-11.978;DP=718;FS=0.000;HRun=7;HaplotypeScore=59.7250;InbreedingCoeff=0.9957;MQ=78.72;MQ0=0;MQRankSum=-4.700;QD=30.42;ReadPosRankSum=0.272;VQSLOD=5.0561;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,129,1246	1/1:1,10:11:30.09:362,30,0	0/0:22,0:22:51.02:0,51,478	0/0:16,0:16:20.98:0,21,192	1/1:5,34:40:99:1141,99,0	1/1:0,20:20:57.17:689,57,0	1/1:5,14:19:36.11:435,36,0	1/1:3,31:34:90.22:1033,90,0	1/1:0,20:20:57.17:689,57,0	1/1:5,28:33:84.24:1002,84,0	1/1:2,28:30:84.22:998,84,0	1/1:4,22:26:66.18:783,66,0	1/1:3,24:27:66.20:796,66,0	1/1:0,22:22:57.17:689,57,0	1/1:4,27:31:78.24:942,78,0	1/1:6,21:27:58.99:694,59,0	1/1:2,30:32:84.26:1015,84,0	1/1:0,10:10:30.09:362,30,0	1/1:3,18:21:54.15:631,54,0	1/1:3,22:25:66.20:797,66,0	0/0:24,0:24:54.06:0,54,516	1/1:2,17:19:19.17:515,19,0	1/1:5,27:32:52.29:913,52,0	1/1:1,20:21:60.18:725,60,0	1/1:3,28:31:81.25:979,81,0	1/1:3,25:28:75.21:894,75,0	1/1:5,38:44:99:1217,102,0	1/1:0,7:7:21.06:254,21,0
chr10	8255029	.	TG	T	18534.24	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=9.316;DP=622;FS=2.007;HRun=2;HaplotypeScore=114.5188;InbreedingCoeff=0.9942;MQ=86.52;MQ0=0;MQRankSum=-7.220;QD=34.39;ReadPosRankSum=5.213;VQSLOD=4.4709;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,126,1841	1/1:1,5:6:15.05:186,15,0	0/0:24,0:23:63.20:0,63,904	0/0:17,0:17:48.16:0,48,692	1/1:1,26:27:78.19:949,78,0	1/1:1,32:33:96.30:1188,96,0	1/1:1,17:18:48.15:595,48,0	1/1:1,31:32:93.29:1153,93,0	1/1:0,19:19:54.17:669,54,0	1/1:0,27:27:81.24:988,81,0	1/1:0,21:21:57.18:707,57,0	1/1:0,16:16:42.13:521,42,0	1/1:0,15:15:42.13:521,42,0	1/1:2,11:13:33.10:409,33,0	1/1:0,29:29:87.27:1078,87,0	1/1:0,22:22:60.19:744,60,0	1/1:1,26:27:75.24:929,75,0	1/1:1,14:15:42.13:520,42,0	1/1:3,15:18:45.14:558,45,0	1/1:1,20:21:57.18:706,57,0	1/1:0,25:25:72.23:893,72,0	1/1:23,0:23:39.05:478,39,0	1/1:0,23:23:66.21:818,66,0	1/1:1,20:21:60.19:744,60,0	1/1:1,19:21:60.19:744,60,0	1/1:0,23:23:69.18:839,69,0	1/1:0,31:31:90.28:1115,90,0	1/1:0,13:13:39.12:483,39,0
chr10	8255031	.	GT	G	18518.38	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=9.068;DP=621;FS=2.575;HRun=1;HaplotypeScore=114.4982;InbreedingCoeff=0.9942;MQ=86.63;MQ0=0;MQRankSum=-6.412;QD=34.48;ReadPosRankSum=5.720;VQSLOD=4.4455;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,129,2026	1/1:5,0:5:15.05:186,15,0	0/0:25,0:24:69.22:0,69,1054	0/0:16,0:16:48.14:0,48,727	1/1:26,0:26:78.19:949,78,0	1/1:33,0:33:96.30:1188,96,0	1/1:18,0:18:48.15:595,48,0	1/1:32,0:32:93.29:1153,93,0	1/1:19,0:19:54.17:669,54,0	1/1:29,0:29:81.24:988,81,0	1/1:21,0:21:57.18:707,57,0	1/1:17,0:17:42.13:521,42,0	1/1:15,0:15:42.13:521,42,0	1/1:12,0:12:33.10:409,33,0	1/1:29,0:29:87.27:1078,87,0	1/1:23,0:23:60.19:744,60,0	1/1:26,0:26:75.24:929,75,0	1/1:14,0:14:42.13:520,42,0	1/1:18,0:18:45.14:558,45,0	1/1:20,0:20:57.18:706,57,0	1/1:25,0:25:72.23:893,72,0	1/1:0,23:23:39.05:486,39,0	1/1:23,0:23:66.21:818,66,0	1/1:20,0:20:60.19:744,60,0	1/1:21,0:21:60.19:744,60,0	1/1:24,0:24:65.01:816,65,0	1/1:31,0:31:90.28:1115,90,0	1/1:13,0:13:39.12:483,39,0
chr10	8255964	.	G	GCCTG	18950.21	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=9.436;DP=750;FS=13.338;HRun=0;HaplotypeScore=228.4011;InbreedingCoeff=0.9396;MQ=53.74;MQ0=0;MQRankSum=-8.227;QD=29.15;ReadPosRankSum=1.868;VQSLOD=3.0269;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:69.20:0,69,1135	1/1:16,0:16:42:698,42,0	0/0:25,0:22:47.74:0,48,724	0/0:26,0:25:45.92:0,46,751	1/1:42,0:41:45.04:693,45,0	1/1:30,0:30:56.88:810,57,0	1/1:32,0:32:53.84:720,54,0	1/1:36,0:36:68.71:702,69,0	1/1:23,0:23:56.98:1012,57,0	1/1:31,0:30:71.64:1052,72,0	1/1:30,0:30:36.02:602,36,0	1/1:23,0:23:54.03:1088,54,0	1/1:28,0:28:68.97:1157,69,0	1/1:30,12:43:51.10:1023,51,0	1/1:30,0:30:51.11:954,51,0	1/1:28,0:28:78.15:1572,78,0	1/1:23,0:23:27.91:369,28,0	1/1:14,0:14:27.53:546,28,0	1/1:17,0:17:32.72:439,33,0	1/1:31,0:31:48.28:738,48,0	0/0:17,0:17:2.19:0,2,7	1/1:17,0:17:23.81:389,24,0	1/1:35,0:35:39.10:786,39,0	1/1:23,0:23:18.02:263,18,0	1/1:28,0:28:42.02:556,42,0	1/1:31,0:31:71.64:1278,72,0	1/1:32,0:32:77.99:1292,78,0	1/1:7,0:7:15.02:210,15,0
chr10	8255972	.	G	GCC	6903.34	PASS	AB=0.751;AC=24;AF=0.429;AN=56;BaseQRankSum=13.610;DP=766;FS=56.513;HRun=0;HaplotypeScore=234.1809;InbreedingCoeff=-0.7403;MQ=64.72;MQ0=0;MQRankSum=-13.698;QD=10.60;ReadPosRankSum=9.469;VQSLOD=1.7788;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:87.28:0,87,1382	0/1:7,8:15:8.33:363,0,8	0/0:34,0:32:93.31:0,93,1437	0/0:33,0:32:73.85:0,74,1178	0/1:27,14:41:99:190,0,244	0/1:16,12:28:45.20:318,0,45	0/1:28,4:32:99:224,0,278	0/1:38,2:40:99:127,0,451	0/1:14,11:25:99:400,0,138	0/1:24,7:30:99:423,0,204	0/1:21,8:29:99:216,0,384	0/1:9,15:24:74.15:449,0,74	0/1:16,13:29:82.43:447,0,82	0/1:26,13:39:99:374,0,197	0/1:17,13:30:42.36:341,0,42	0/1:11,19:30:48.60:704,0,49	0/1:17,7:24:99:101,0,251	0/1:10,4:14:73.36:162,0,73	0/1:12,3:15:99:172,0,124	0/1:17,13:30:99:274,0,138	0/0:15,1:16:12.37:0,12,126	0/1:17,7:24:99:105,0,267	0/1:19,17:36:99:246,0,250	0/1:22,3:25:99:111,0,145	0/1:17,7:24:99:186,0,137	0/1:18,12:30:99:438,0,168	0/1:18,10:29:99:451,0,103	0/1:5,1:7:18.92:81,0,19
chr10	8255974	.	G	GTC	5351.34	PASS	AB=0.760;AC=25;AF=0.446;AN=56;BaseQRankSum=11.693;DP=776;FS=38.109;HRun=0;HaplotypeScore=240.8296;InbreedingCoeff=-0.6463;MQ=66.44;MQ0=0;MQRankSum=-13.402;QD=8.10;ReadPosRankSum=10.856;VQSLOD=1.8248;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:90.25:0,90,1308	0/1:8,8:16:17.56:151,0,18	0/0:35,0:33:89.28:0,89,1249	0/0:32,0:32:67.26:0,67,1021	0/1:27,14:41:99:138,0,129	0/1:16,12:28:46.03:189,0,46	0/1:28,4:32:99:159,0,165	0/1:40,2:42:99:159,0,234	0/1:15,11:26:66.76:349,0,67	0/1:24,7:30:99:257,0,174	0/1:20,8:28:99:133,0,197	0/1:11,15:26:47.35:382,0,47	0/1:15,13:28:94.82:327,0,95	0/1:26,13:39:99:320,0,113	0/1:16,13:29:5.03:305,0,5	1/1:11,19:30:18.15:604,18,0	0/1:17,7:24:99:108,0,148	0/1:10,4:14:44.64:142,0,45	0/1:12,3:15:99:125,0,108	0/1:18,12:31:79.04:231,0,79	0/0:15,0:16:10.66:0,11,50	0/1:18,7:25:99:130,0,112	0/1:19,17:36:99:214,0,126	0/1:21,3:24:41.90:42,0,84	0/1:18,7:25:62.69:63,0,106	0/1:19,12:31:99:411,0,115	0/1:22,10:33:99:359,0,164	0/1:5,2:7:37.50:55,0,37
chr10	8256322	.	G	GTC	30963.15	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-11.176;DP=762;FS=0.000;HRun=0;HaplotypeScore=86.0031;InbreedingCoeff=0.9889;MQ=83.86;MQ0=2;MQRankSum=-7.839;QD=46.21;ReadPosRankSum=3.200;VQSLOD=6.1753;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,117,1676	1/1:2,11:13:33.11:593,33,0	0/0:24,0:25:32.89:0,33,754	0/0:28,0:28:72.12:0,72,982	1/1:1,22:23:60.20:1063,60,0	1/1:1,31:33:90.31:1632,90,0	1/1:1,21:22:54.19:990,54,0	1/1:2,32:34:96.33:1725,96,0	1/1:0,29:30:81.28:1477,81,0	1/1:2,22:24:66.23:1203,66,0	1/1:2,22:23:57.20:1037,57,0	1/1:1,20:22:54.19:990,54,0	1/1:3,29:32:72.25:1320,72,0	1/1:0,21:21:54.19:989,54,0	1/1:5,23:30:66.23:1210,66,0	1/1:0,36:36:99:1924,105,0	1/1:3,33:39:90.31:1648,90,0	1/1:1,17:18:48.16:879,48,0	1/1:3,15:18:45.15:815,45,0	1/1:4,35:40:96.33:1742,96,0	1/1:0,29:29:72.25:1318,72,0	1/1:0,27:27:66.23:1207,66,0	1/1:0,27:27:69.24:1231,69,0	1/1:1,21:22:51.17:935,51,0	1/1:0,26:26:78.27:1428,78,0	1/1:5,33:37:96.33:1737,96,0	1/1:1,37:38:90.14:1648,90,0	1/1:0,4:4:12.04:220,12,0
chr10	8256968	.	C	CA	576.54	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-4.310;DP=698;FS=2.150;HRun=0;HaplotypeScore=129.4872;InbreedingCoeff=0.9380;MQ=88.22;MQ0=0;MQRankSum=-2.160;QD=38.44;ReadPosRankSum=-0.391;VQSLOD=3.0549;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:81.09:0,81,1086	0/0:4,0:4:9.03:0,9,126	0/0:27,0:26:47.37:0,47,884	0/0:30,0:30:74.25:0,74,893	0/0:29,0:29:87.15:0,87,1125	0/0:34,0:34:96.28:0,96,1318	0/0:28,0:28:72.24:0,72,1000	0/0:27,0:27:72.20:0,72,974	0/0:24,0:24:72.18:0,72,967	0/0:32,0:32:96.32:0,96,1336	0/0:18,0:18:54.18:0,54,754	0/0:24,0:24:72.24:0,72,1005	0/0:34,0:34:99:0,102,1397	0/0:23,0:23:63.17:0,63,858	0/0:39,0:39:99:0,117,1633	0/0:19,0:19:57.19:0,57,795	0/0:26,0:26:78.19:0,78,1059	0/0:19,0:19:54.18:0,54,749	0/0:13,0:13:39.13:0,39,544	0/0:24,0:24:72.24:0,72,1005	1/1:0,15:15:42.14:671,42,0	0/0:23,0:23:66.18:0,66,900	0/0:16,0:16:48.12:0,48,646	0/0:29,0:29:87.28:0,87,1199	0/0:37,0:37:99:0,108,1508	0/0:22,0:22:66.22:0,66,914	0/0:45,0:45:99:0,135,1858	0/0:6,0:6:18.06:0,18,251
chr10	8258412	.	GTCT	G	782.79	PASS	AB=0.987;AC=16;AF=0.286;AN=56;BaseQRankSum=4.781;DP=420;FS=29.717;HRun=0;HaplotypeScore=83.8075;InbreedingCoeff=0.1442;MQ=71.30;MQ0=0;MQRankSum=-3.184;QD=4.55;ReadPosRankSum=-2.167;VQSLOD=0.2723;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:30.08:0,30,490	0/0:7,0:7:6.14:0,6,28	0/0:18,0:15:35.55:0,36,496	0/1:10,0:8:22.25:22,0,160	0/0:22,0:22:66.23:0,66,1290	0/1:6,0:6:4.71:78,0,5	0/1:15,0:15:37.54:76,0,38	0/1:13,0:14:30.53:31,0,52	1/1:10,1:11:4.27:119,4,0	0/0:17,0:17:48.16:0,48,862	0/0:16,0:16:45.15:0,45,883	0/1:15,0:15:33.75:52,0,34	0/0:12,0:12:2.44:0,2,91	0/1:9,0:9:12.01:12,0,54	0/0:24,0:24:72.24:0,72,1401	0/0:14,0:14:42.14:0,42,856	1/1:25,3:28:14.40:372,14,0	0/0:11,0:11:33.07:0,33,601	0/1:13,0:13:9.50:16,0,9	1/1:12,1:13:8.33:72,8,0	0/0:20,0:20:54.13:0,54,644	0/0:19,0:19:54.19:0,54,1062	0/0:19,0:19:51.17:0,51,1033	0/0:23,0:23:69.24:0,69,1402	0/1:11,0:11:0.01:0,0,0	0/1:12,0:12:36.20:36,0,39	0/1:14,0:15:22.32:59,0,22	0/0:11,0:11:11.91:0,12,61
chr10	8258415	.	TTCC	T	2641.52	PASS	AB=1.000;AC=31;AF=0.554;AN=56;BaseQRankSum=-6.682;DP=402;FS=7.330;HRun=0;HaplotypeScore=75.5339;InbreedingCoeff=0.8810;MQ=70.52;MQ0=1;MQRankSum=-1.151;QD=14.28;ReadPosRankSum=-5.826;VQSLOD=0.5954;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:27.51:0,28,391	1/1:6,0:7:11.93:98,12,0	0/0:19,0:14:18.57:0,19,420	0/1:10,0:8:7.97:8,0,152	0/0:22,0:22:66.17:0,66,1174	1/1:3,2:6:13.59:191,14,0	1/1:12,1:15:30.04:221,30,0	1/1:11,1:13:27.03:269,27,0	1/1:9,1:11:24.81:223,25,0	0/0:18,0:18:48.12:0,48,747	0/0:17,0:17:48.14:0,48,908	1/1:10,1:12:23.35:227,23,0	1/1:9,0:9:2.54:50,3,0	1/1:8,0:8:15.05:116,15,0	0/0:23,0:23:69.21:0,69,1343	0/0:15,0:15:45.12:0,45,856	1/1:3,20:25:33.58:537,34,0	0/0:11,0:11:33.08:0,33,577	1/1:12,0:12:14.75:162,15,0	1/1:4,8:13:17.57:139,18,0	0/0:20,0:20:53.99:0,54,562	0/0:19,0:19:57.12:0,57,1015	0/0:17,0:17:51.15:0,51,989	0/0:24,0:24:72.20:0,72,1434	1/1:1,0:9:5.88:36,6,0	1/1:1,9:10:20.96:193,21,0	1/1:9,2:14:19.70:202,20,0	1/1:11,0:11:24.18:191,24,0
chr10	8259257	.	GCTCT	G	189.43	PASS	AB=0.962;AC=7;AF=0.146;AN=48;BaseQRankSum=1.098;DP=646;FS=2.282;HRun=0;HaplotypeScore=155.0224;InbreedingCoeff=0.1516;MQ=65.74;MQ0=23;MQRankSum=2.074;QD=1.75;ReadPosRankSum=1.028;VQSLOD=2.4465;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:34,4:37:99:220,0,125	0/1:10,0:10:14.92:15,0,83	./.	0/0:69,0:31:0.89:0,1,2	./.	0/0:20,0:20:6.01:0,6,91	0/0:26,0:26:9:0,9,124	0/0:26,0:25:9.55:0,10,92	0/1:28,0:28:4.57:5,0,38	0/0:25,0:24:12.02:0,12,172	0/0:9,0:9:3.01:0,3,46	0/0:21,0:20:5.99:0,6,79	0/0:16,0:15:6.46:0,6,61	0/0:27,0:26:12.50:0,12,151	0/0:33,0:33:30.04:0,30,532	1/1:19,0:19:1.72:4,2,0	0/0:24,0:22:6.87:0,7,72	./.	0/0:15,0:14:2.97:0,3,20	0/0:18,0:18:6.01:0,6,59	0/0:25,0:26:3.01:0,3,32	0/0:17,0:17:3.01:0,3,61	1/1:12,0:12:5.05:50,5,0	0/0:22,0:21:12:0,12,204	0/0:17,0:17:9.01:0,9,124	0/0:26,0:26:27.88:0,28,284	0/0:20,0:18:17.99:0,18,230	./.
chr10	8259374	.	A	AGTGT	9287.55	PASS	AB=0.664;AC=40;AF=0.741;AN=54;BaseQRankSum=-0.815;DP=726;FS=7.334;HRun=0;HaplotypeScore=141.3053;InbreedingCoeff=-0.1551;MQ=58.15;MQ0=22;MQRankSum=-1.452;QD=14.44;ReadPosRankSum=0.459;VQSLOD=4.0999;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:41:41.62:0,42,764	0/1:3,5:10:12.93:214,0,13	1/1:31,0:15:2.04:6,2,0	./.	1/1:7,0:22:0.98:7,1,0	0/1:6,12:20:9.89:342,0,10	1/1:19,19:42:41.35:829,41,0	1/1:21,8:32:27:397,27,0	1/1:6,12:23:26.83:564,27,0	0/1:12,0:14:16.09:16,0,40	1/1:7,0:12:16.70:83,17,0	0/1:7,12:22:24.46:423,0,24	0/1:9,15:27:15.34:568,0,15	1/1:3,20:26:38.60:779,39,0	0/1:10,0:33:45.81:206,0,46	1/1:6,0:16:9.87:115,10,0	1/1:14,17:32:44.21:883,44,0	0/1:9,0:10:19.76:64,0,20	1/1:13,4:15:15.17:173,15,0	1/1:6,15:22:32.79:733,33,0	0/1:28,0:51:99:107,0,209	0/1:16,0:22:73.96:172,0,74	0/1:4,0:21:6.40:134,0,6	0/1:16,0:43:99:166,0,170	0/1:8,9:23:27.38:317,0,27	1/1:9,19:30:14.95:1018,15,0	1/1:6,13:23:35.33:685,35,0	1/1:3,4:7:12.04:288,12,0
chr10	8259861	.	A	ATT	12583.28	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=-15.185;DP=635;FS=4.185;HRun=9;HaplotypeScore=71.1770;InbreedingCoeff=0.9889;MQ=75.58;MQ0=2;MQRankSum=-1.678;QD=35.75;ReadPosRankSum=0.620;VQSLOD=5.0238;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:75.17:0,75,798	1/1:3,5:8:15.01:205,15,0	0/0:22,0:21:41.81:0,42,421	0/0:10,0:10:10.46:0,10,124	0/0:41,0:41:99:0,117,1245	1/1:2,19:22:48.16:722,48,0	1/1:0,5:7:18.06:260,18,0	1/1:13,24:37:72.24:1100,72,0	1/1:0,20:20:51.17:785,51,0	0/0:31,0:31:84.20:0,84,894	0/0:28,0:29:77.91:0,78,810	1/1:2,12:14:36.12:549,36,0	1/1:2,14:17:38.96:569,39,0	1/1:1,13:13:30.10:462,30,0	0/0:27,0:27:69.15:0,69,734	0/0:28,0:28:72.17:0,72,766	1/1:2,25:29:77.24:1125,77,0	0/0:19,0:19:48.11:0,48,510	1/1:7,17:25:62.67:888,63,0	1/1:6,39:46:99:1740,120,0	1/1:3,0:12:24.04:230,24,0	0/0:21,0:21:54.11:0,54,568	0/0:20,0:20:53.99:0,54,571	0/0:8,0:8:17.52:0,18,189	1/1:1,28:29:78.26:1201,78,0	1/1:4,20:24:60.20:920,60,0	1/1:6,29:35:87.29:1320,87,0	1/1:0,12:12:33.11:508,33,0
chr10	8260318	.	T	TATCA	12802.95	PASS	AB=0.955;AC=21;AF=0.375;AN=56;BaseQRankSum=-14.203;DP=664;FS=11.075;HRun=0;HaplotypeScore=102.0887;InbreedingCoeff=0.9206;MQ=84.32;MQ0=1;MQRankSum=-4.313;QD=52.69;ReadPosRankSum=3.026;VQSLOD=5.6618;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:90.23:0,90,1561	0/0:7,0:7:18.06:0,18,336	0/0:19,0:19:41.10:0,41,674	0/0:24,0:25:61.04:0,61,1028	1/1:1,25:28:63.13:1555,63,0	0/0:31,0:31:93.28:0,93,1669	0/0:24,0:24:66.23:0,66,1229	0/0:37,0:37:99:0,99,1726	0/0:22,0:22:63.17:0,63,1078	1/1:3,23:27:69.24:1838,69,0	1/1:1,16:22:39.09:978,39,0	0/0:34,0:34:87.27:0,87,1552	0/0:21,0:21:57.15:0,57,961	0/0:28,0:28:75.24:0,75,1368	1/1:2,26:29:60.21:1598,60,0	1/1:0,22:23:51.18:1358,51,0	0/0:26,0:26:75.26:0,75,1389	1/1:0,10:11:30.10:799,30,0	0/0:31,0:31:90.24:0,90,1532	0/0:33,0:33:93.27:0,93,1641	1/1:0,19:19:45.11:1138,45,0	1/1:2,27:30:69.24:1835,69,0	1/1:2,18:21:48.16:1278,48,0	1/1:0,8:11:15.52:400,16,0	0/0:15,0:15:45.14:0,45,801	0/1:20,1:21:25.87:26,0,869	0/0:25,0:25:72.25:0,72,1342	0/0:10,0:10:30.07:0,30,484
chr10	8260524	.	A	AGTGTGTGTGTGTGT	1520.36	PASS	AB=1.000;AC=19;AF=0.352;AN=54;BaseQRankSum=1.049;DP=604;FS=51.730;HRun=0;HaplotypeScore=241.1900;InbreedingCoeff=0.2169;MQ=64.93;MQ0=5;MQRankSum=-3.262;QD=5.55;ReadPosRankSum=-4.221;VQSLOD=0.3710;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:23.37:0,23,2200	0/0:11,0:11:9.03:0,9,257	1/1:24,0:18:0.41:1,0,0	./.	0/0:23,0:24:12.01:0,12,361	0/1:23,0:23:18.70:19,0,107	0/0:24,0:22:21.09:0,21,431	0/1:27,0:27:27.81:28,0,295	0/0:18,0:17:2.69:0,3,50	1/1:22,0:21:27.09:800,27,0	1/1:15,0:14:0.94:2,1,0	0/0:21,0:20:7.36:0,7,79	0/0:26,0:26:33.09:0,33,1054	0/0:18,0:17:27.56:0,28,745	1/1:19,0:16:12:219,12,0	0/0:20,0:20:6.10:0,6,156	0/1:16,0:15:5.81:273,0,6	0/1:21,0:21:80.68:81,0,486	0/1:20,0:19:25.51:26,0,176	0/0:30,0:29:27.09:0,27,790	0/0:19,0:18:1.66:0,2,77	1/1:17,0:17:3.01:55,3,0	1/1:14,0:15:6.02:122,6,0	0/0:12,6:18:0.88:0,1,2	0/0:30,0:30:13.60:0,14,284	0/1:32,0:32:4.20:4,0,1141	0/1:22,0:22:46.57:47,0,185	0/0:9,0:9:5.56:0,6,129
chr10	8260554	.	T	TGTGAGAGAGAGA	2555.66	PASS	AB=0.974;AC=18;AF=0.321;AN=56;BaseQRankSum=2.482;DP=537;FS=9.272;HRun=0;HaplotypeScore=189.0771;InbreedingCoeff=-0.1121;MQ=49.17;MQ0=16;MQRankSum=-5.150;QD=9.23;ReadPosRankSum=-1.270;VQSLOD=1.6785;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,105,2321	0/1:8,0:7:21.58:136,0,22	0/0:7,0:5:6.01:0,6,128	0/0:14,0:7:4.60:0,5,80	0/1:20,0:20:12.05:12,0,51	0/0:21,0:20:3:0,3,25	0/1:30,0:28:8.89:193,0,9	0/1:22,0:16:49.38:66,0,49	1/1:18,0:16:0.47:1,0,0	0/1:19,0:18:18.73:19,0,603	0/0:11,0:10:5.63:0,6,109	1/1:20,0:19:9.68:96,10,0	0/1:13,6:22:23.65:93,0,24	0/1:14,0:13:28.51:99,0,29	0/0:21,0:18:19.88:0,20,559	0/1:17,0:16:13.76:89,0,14	1/1:15,0:14:8.86:199,9,0	0/0:20,0:20:6.01:0,6,412	0/1:14,0:14:9.17:543,0,9	0/0:32,0:30:6.46:0,6,50	0/0:11,0:10:2.97:0,3,20	0/0:22,0:21:20.98:0,21,626	0/0:15,0:15:9.03:0,9,205	0/0:22,0:19:12.04:0,12,298	0/0:15,0:15:5.95:0,6,45	0/1:28,0:25:8.13:722,0,8	0/1:24,0:24:25.22:334,0,25	0/1:4,0:4:10.94:108,0,11
chr10	8260556	.	T	TGAGAGAGAGAGAGA	6965.25	PASS	AB=1.000;AC=34;AF=0.630;AN=54;BaseQRankSum=-3.795;DP=607;FS=11.362;HRun=0;HaplotypeScore=219.5987;InbreedingCoeff=0.6319;MQ=48.35;MQ0=16;MQRankSum=-5.108;QD=17.41;ReadPosRankSum=0.398;VQSLOD=2.5811;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:53.60:0,54,2149	1/1:10,0:9:15.03:389,15,0	0/0:4,0:4:5.99:0,6,141	0/0:16,0:8:5.18:0,5,107	1/1:23,0:23:6.96:52,7,0	./.	1/1:33,0:31:25.07:479,25,0	1/1:31,0:25:46.21:680,46,0	0/0:4,6:17:0.47:0,0,1	0/1:19,0:18:36.97:37,0,605	0/0:12,0:11:9.03:0,9,164	1/1:24,0:23:18.96:350,19,0	1/1:28,0:26:38.96:662,39,0	1/1:19,0:18:21.01:312,21,0	0/0:23,0:20:25.84:0,26,595	1/1:18,0:17:12.38:194,12,0	1/1:7,4:20:9.03:396,9,0	0/1:18,0:18:99:127,0,343	1/1:20,0:19:38.09:1061,38,0	1/1:11,0:34:2.97:20,3,0	1/1:11,0:10:2.61:40,3,0	0/0:23,0:22:21.49:0,21,639	0/0:14,0:14:9.03:0,9,239	0/0:21,0:18:12.04:0,12,322	1/1:12,0:26:0.47:1,0,0	1/1:30,1:27:62.51:1535,63,0	1/1:7,14:28:8.91:438,9,0	1/1:4,0:4:9.03:192,9,0
chr10	8260574	.	G	GGAGAGAGAGG	2071.28	PASS	AB=0.976;AC=16;AF=0.286;AN=56;BaseQRankSum=5.605;DP=651;FS=22.412;HRun=0;HaplotypeScore=203.3414;InbreedingCoeff=-0.2977;MQ=64.70;MQ0=21;MQRankSum=-4.898;QD=5.63;ReadPosRankSum=2.937;VQSLOD=1.3034;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:86.98:0,87,1823	0/1:12,0:11:68.78:109,0,69	0/0:34,0:19:14.74:0,15,211	0/1:48,0:23:37.70:38,0,154	0/1:24,0:26:3.04:3,0,70	1/1:22,0:21:4.07:12,4,0	0/1:30,0:28:34:154,0,34	0/1:35,0:29:24.98:25,0,121	0/0:16,0:14:2.01:0,2,38	0/0:21,0:20:44.85:0,45,753	0/0:14,0:13:12.03:0,12,218	0/1:20,0:19:17.49:68,0,17	0/1:33,0:31:50.09:50,0,148	0/1:20,0:19:69.15:83,0,69	0/0:19,0:16:36.08:0,36,632	0/1:21,0:21:69.99:70,0,85	0/1:15,0:15:59.84:134,0,60	0/0:15,0:15:6.84:0,7,322	0/1:18,4:22:99:499,0,151	0/0:22,0:20:5.96:0,6,45	0/0:14,0:13:8.92:0,9,64	0/0:20,0:19:26.75:0,27,596	0/0:10,0:10:9.03:0,9,213	0/0:23,0:20:12.04:0,12,284	0/0:27,0:27:11.57:0,12,101	0/1:34,0:30:99:629,0,111	0/1:20,0:20:39.75:258,0,40	0/1:6,0:6:53.80:94,0,54
chr10	8260969	.	AT	A	8715.74	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=15.195;DP=679;FS=5.396;HRun=2;HaplotypeScore=65.2530;InbreedingCoeff=0.9998;MQ=87.49;MQ0=0;MQRankSum=0.180;QD=35.43;ReadPosRankSum=3.479;VQSLOD=5.5091;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:87.24:0,87,1230	0/0:11,0:11:33.11:0,33,494	0/0:25,0:25:56.35:0,56,825	0/0:25,0:25:71.75:0,72,886	1/1:0,21:21:60.09:738,60,0	0/0:23,0:23:69.19:0,69,988	0/0:22,0:22:66.22:0,66,988	0/0:39,0:39:99:0,117,1680	0/0:23,0:23:69.23:0,69,1033	1/1:0,35:35:99:1253,102,0	1/1:1,21:22:63.12:795,63,0	0/0:20,0:20:60.19:0,60,874	0/0:25,0:25:75.24:0,75,1101	0/0:27,0:27:78.21:0,78,1088	1/1:0,35:35:87.28:1129,87,0	1/1:0,23:23:66.21:856,66,0	0/0:20,0:20:60.18:0,60,876	1/1:0,11:11:27.09:349,27,0	0/0:31,0:31:93.29:0,93,1337	0/0:30,0:30:90.30:0,90,1336	1/1:1,16:17:45.15:584,45,0	1/1:0,28:28:81.18:1028,81,0	1/1:0,29:29:84.18:1050,84,0	1/1:0,25:25:72.23:934,72,0	0/0:19,0:19:57.18:0,57,830	0/0:24,0:24:72.23:0,72,1042	0/0:28,0:28:84.22:0,84,1176	0/0:12,0:12:36.10:0,36,518
chr10	8261741	.	G	GCCTATGCAGA	20052.82	PASS	AB=0.941;AC=13;AF=0.232;AN=56;BaseQRankSum=-8.752;DP=833;FS=0.342;HRun=0;HaplotypeScore=234.8490;InbreedingCoeff=0.8990;MQ=78.75;MQ0=0;MQRankSum=-17.328;QD=96.41;ReadPosRankSum=-0.762;VQSLOD=4.3964;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:74,0:74:99:0,220,6887	0/0:20,0:20:57.19:0,57,1757	0/0:26,0:26:69.21:0,69,1889	0/0:20,0:20:54.14:0,54,1346	0/0:32,0:32:87.27:0,87,2716	0/0:18,0:18:48.16:0,48,1582	0/0:22,0:22:57.18:0,57,1778	0/0:39,0:39:99:0,114,3355	0/0:25,0:25:66.21:0,66,2100	1/1:18,25:46:99:6229,132,0	1/1:7,15:25:45.15:2371,45,0	0/0:25,0:25:72.25:0,72,2250	0/0:20,0:20:57.18:0,57,1777	0/0:34,0:34:99:0,99,3133	1/1:11,19:34:87.30:4403,87,0	0/0:31,0:31:87.28:0,87,2791	0/0:37,0:37:99:0,105,3277	0/0:21,0:21:60.21:0,60,1942	0/0:27,0:27:72.21:0,72,2262	0/0:36,0:36:99:0,105,3277	0/0:51,0:51:99:0,154,4888	1/1:12,19:33:72.25:3740,72,0	1/1:9,10:22:36.12:1871,36,0	1/1:7,5:16:21.07:1056,21,0	0/0:21,0:21:63.22:0,63,1981	0/1:30,2:32:99:382,0,2488	0/0:25,0:25:72.25:0,72,2366	0/0:21,0:21:56.98:0,57,1735
chr10	8263269	.	C	CA	10014.77	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-14.876;DP=856;FS=0.870;HRun=4;HaplotypeScore=80.0545;InbreedingCoeff=0.9994;MQ=85.11;MQ0=0;MQRankSum=-2.811;QD=36.42;ReadPosRankSum=4.175;VQSLOD=4.9836;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:61,0:61:99:0,171,1911	0/0:7,0:7:21.06:0,21,238	0/0:26,0:26:75.16:0,75,813	0/0:28,0:28:66.16:0,66,735	1/1:4,28:32:81.27:1098,81,0	0/0:16,0:15:45.11:0,45,501	0/0:39,0:39:99:0,114,1283	0/0:39,0:39:99:0,111,1252	0/0:28,0:28:81.21:0,81,907	1/1:1,23:25:69.23:941,69,0	1/1:3,16:19:48.16:646,48,0	0/0:44,0:44:99:0,129,1434	0/0:42,0:42:99:0,123,1394	0/0:33,0:33:93.23:0,93,1042	1/1:1,32:33:93.31:1272,93,0	1/1:1,26:27:75.21:1006,75,0	0/0:42,0:42:99:0,120,1350	1/1:1,31:32:87.29:1190,87,0	0/0:24,0:24:69.15:0,69,760	0/0:20,0:20:54.15:0,54,613	0/0:43,0:43:99:0,126,1428	1/1:3,27:30:84.24:1121,84,0	1/1:7,26:33:75.25:1026,75,0	1/1:1,43:44:99:1714,126,0	0/0:27,0:27:72.19:0,72,808	0/0:23,0:23:60.17:0,60,681	0/0:25,0:25:75.21:0,75,850	0/0:14,0:14:42.12:0,42,475
chr10	8264261	.	GA	G	1024.79	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=12.959;DP=608;FS=3.637;HRun=1;HaplotypeScore=95.2356;InbreedingCoeff=0.9589;MQ=86.55;MQ0=0;MQRankSum=-2.335;QD=8.01;ReadPosRankSum=2.117;VQSLOD=1.1895;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:69.20:0,69,1004	0/0:7,0:7:21.06:0,21,279	0/0:19,0:18:54.14:0,54,747	0/0:24,0:24:68.61:0,69,904	0/0:20,0:20:57.11:0,57,803	0/0:14,0:14:42.10:0,42,568	0/0:21,0:21:63.18:0,63,900	0/0:31,0:31:90.26:0,90,1247	0/0:23,0:23:69.22:0,69,1012	1/1:20,0:20:27.22:218,27,0	1/1:29,0:29:23.28:161,23,0	0/0:20,0:20:60.19:0,60,878	0/0:36,0:36:99:0,108,1570	0/0:29,0:29:87.28:0,87,1282	1/1:25,1:26:65.36:328,65,0	0/0:31,0:31:93.28:0,93,1335	0/0:28,0:28:84.25:0,84,1214	0/0:23,0:23:69.19:0,69,969	0/0:15,0:15:45.13:0,45,649	0/0:19,0:19:57.19:0,57,850	0/0:22,0:22:63.20:0,63,921	1/1:12,2:14:21.60:201,22,0	1/1:16,1:17:2.61:88,3,0	1/1:22,0:22:45.90:208,46,0	0/0:18,0:18:54.12:0,54,761	0/0:24,0:24:72.21:0,72,1003	0/0:24,0:24:72.24:0,72,1053	0/0:8,0:8:24.08:0,24,359
chr10	8268265	.	A	ATG	11885.42	PASS	AB=0.608;AC=26;AF=0.464;AN=56;BaseQRankSum=-15.896;DP=852;FS=0.308;HRun=0;HaplotypeScore=108.4839;InbreedingCoeff=0.6795;MQ=62.66;MQ0=11;MQRankSum=1.317;QD=26.89;ReadPosRankSum=0.272;VQSLOD=5.9662;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:62.40:0,62,730	1/1:1,5:7:11.69:171,12,0	0/0:49,0:26:26.86:0,27,284	0/0:33,0:22:29.02:0,29,308	0/0:26,0:26:54.17:0,54,651	0/1:14,14:28:99:429,0,147	1/1:8,20:28:24.02:879,24,0	1/1:19,31:50:36.62:1350,37,0	1/1:8,24:32:9.19:862,9,0	0/0:31,0:33:83.92:0,84,968	0/0:27,0:27:66.19:0,66,785	0/1:7,19:26:8.05:626,0,8	1/1:6,21:26:14.99:726,15,0	1/1:6,28:35:73.13:1159,73,0	0/0:27,0:29:67.25:0,67,753	0/0:31,0:35:95.77:0,96,1078	1/1:9,12:21:25.68:448,26,0	0/0:24,0:24:8.75:0,9,531	1/1:12,12:24:43.03:664,43,0	1/1:9,27:36:5.90:1084,6,0	0/0:6,0:43:96.34:0,96,471	0/0:25,0:26:56.77:0,57,665	0/0:28,0:28:54.15:0,54,640	0/0:26,0:26:51.15:0,51,615	0/1:8,23:30:87.52:666,0,88	1/1:9,26:34:62.02:1160,62,0	1/1:11,28:40:11.94:1178,12,0	0/1:6,12:18:77.47:485,0,77
chr10	8269020	.	GA	G	10661.80	PASS	AB=0.924;AC=52;AF=0.929;AN=56;BaseQRankSum=-2.587;DP=604;FS=13.390;HRun=11;HaplotypeScore=66.2589;InbreedingCoeff=0.6126;MQ=75.40;MQ0=0;MQRankSum=-2.167;QD=18.29;ReadPosRankSum=2.568;VQSLOD=5.0352;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:21:48.07:0,48,498	1/1:3,9:12:8.39:200,8,0	0/1:19,1:20:9.06:9,0,169	0/1:15,2:17:0.58:1,0,197	1/1:7,26:33:45.89:584,46,0	1/1:3,16:19:44.94:369,45,0	1/1:3,16:20:46.96:372,47,0	1/1:4,20:24:30.93:461,31,0	1/1:1,21:22:62.92:517,63,0	1/1:2,20:22:59.91:490,60,0	1/1:3,17:20:44.91:369,45,0	1/1:3,16:19:47.93:394,48,0	1/1:5,22:27:30.93:461,31,0	1/1:1,23:25:70.96:572,71,0	1/1:2,30:32:86.88:714,87,0	1/1:3,26:29:74.90:616,75,0	1/1:2,24:26:62.87:511,63,0	1/1:5,15:20:41.94:345,42,0	1/1:2,15:17:6.93:264,7,0	1/1:0,27:27:68.88:566,69,0	1/1:9,13:22:35.78:285,36,0	1/1:2,25:27:71.90:591,72,0	1/1:2,12:14:29.95:246,30,0	1/1:0,14:14:35.96:296,36,0	1/1:3,13:16:38.93:320,39,0	1/1:5,21:26:62.90:517,63,0	1/1:6,18:24:47.94:394,48,0	1/1:0,9:9:23.97:197,24,0
chr10	8269127	.	TTGTG	T	3560.58	PASS	AB=0.848;AC=32;AF=0.615;AN=52;BaseQRankSum=5.957;DP=601;FS=1.100;HRun=0;HaplotypeScore=107.0696;InbreedingCoeff=0.6280;MQ=70.10;MQ0=8;MQRankSum=-0.686;QD=9.65;ReadPosRankSum=2.090;VQSLOD=2.8422;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:32,1:33:47.20:47,0,635	1/1:4,2:7:12.02:147,12,0	./.	./.	0/0:28,1:32:38.59:0,39,678	1/1:10,12:23:21.05:288,21,0	1/1:11,10:22:24.06:334,24,0	1/1:23,0:23:3.48:46,3,0	1/1:6,10:19:24.06:318,24,0	0/0:18,0:18:30.56:0,31,574	0/0:16,0:16:21.07:0,21,475	1/1:12,3:17:11.87:155,12,0	1/1:21,11:34:30.09:431,30,0	1/1:8,5:14:12.03:169,12,0	0/0:20,0:23:26.83:0,27,537	0/1:17,1:25:20.38:20,0,376	0/1:9,4:14:5.93:41,0,6	0/1:12,1:13:33.30:33,0,134	1/1:15,0:16:5.29:53,5,0	1/1:14,14:28:20.86:294,21,0	0/0:28,0:27:30.06:0,30,459	0/0:24,0:24:39.12:0,39,763	0/0:15,0:15:15.05:0,15,328	0/0:30,0:33:56.90:0,57,1135	1/1:8,11:18:23.84:375,24,0	1/1:19,10:29:27.41:346,27,0	1/1:12,8:20:21.06:309,21,0	1/1:11,0:9:13.87:153,14,0
chr10	8269904	.	AT	A	8772.13	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-7.006;DP=613;FS=1.447;HRun=9;HaplotypeScore=73.0926;InbreedingCoeff=0.9976;MQ=75.47;MQ0=0;MQRankSum=-2.425;QD=21.71;ReadPosRankSum=2.195;VQSLOD=5.7804;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:63.18:0,63,717	1/1:0,10:10:24.01:220,24,0	0/0:15,0:15:35.99:0,36,367	0/0:16,0:15:33.22:0,33,378	1/1:5,24:30:74.07:664,74,0	1/1:0,21:21:60.03:549,60,0	1/1:2,13:15:36.02:329,36,0	1/1:7,24:32:74.02:651,74,0	1/1:2,19:21:54.02:494,54,0	0/0:29,0:29:81.23:0,81,920	0/0:23,0:23:63.18:0,63,720	1/1:4,17:21:45.02:411,45,0	1/1:5,27:32:66.01:604,66,0	1/1:0,18:18:48.03:439,48,0	0/0:26,0:26:72.20:0,72,822	1/1:2,15:17:39.02:357,39,0	1/1:0,8:8:24.01:220,24,0	1/1:2,19:21:51.03:467,51,0	1/1:5,12:17:31.99:318,32,0	1/1:3,21:24:59.96:535,60,0	1/1:1,7:8:18.01:165,18,0	0/0:28,0:28:81.23:0,81,925	0/0:31,0:31:93.24:0,93,1042	0/0:18,0:18:51.11:0,51,574	1/1:5,20:25:57.02:522,57,0	1/1:4,29:33:23.74:708,24,0	1/1:1,30:31:75.04:686,75,0	1/1:2,18:20:48:433,48,0
chr10	8274063	.	ATG	A	1598.64	PASS	AB=0.821;AC=24;AF=0.444;AN=54;BaseQRankSum=-1.861;DP=626;FS=5.800;HRun=0;HaplotypeScore=120.8993;InbreedingCoeff=0.5472;MQ=59.42;MQ0=6;MQRankSum=0.859;QD=5.97;ReadPosRankSum=3.218;VQSLOD=2.5823;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:27:27.06:0,27,354	1/1:11,1:12:5.85:47,6,0	./.	0/0:26,0:20:0:0,0,0	0/0:14,0:18:11.03:0,11,82	0/1:14,7:22:36.88:223,0,37	1/1:15,4:20:17.88:177,18,0	0/0:23,0:22:0:0,0,0	1/1:17,5:23:23.36:210,23,0	0/0:21,0:24:24.02:0,24,280	0/0:18,0:19:14.05:0,14,129	0/1:18,4:22:28.60:115,0,29	1/1:13,4:19:17.71:158,18,0	1/1:20,2:23:11.86:112,12,0	0/1:27,1:32:38.22:38,0,192	0/0:26,0:32:37.65:0,38,315	1/1:20,8:28:0.55:214,1,0	0/0:18,0:26:35.35:0,35,317	0/0:17,0:16:5.85:0,6,53	1/1:5,1:10:11.53:75,12,0	0/0:50,1:50:28.91:0,29,440	0/0:21,0:22:20.40:0,20,219	0/0:14,0:15:11.51:0,12,109	0/0:28,0:31:23.83:0,24,209	1/1:11,4:17:20.46:170,20,0	1/1:13,2:16:7.11:76,7,0	1/1:11,4:18:15.34:145,15,0	0/1:2,1:3:16.08:27,0,16
chr10	8274200	.	CG	C	14580.81	PASS	AB=0.681;AC=54;AF=0.964;AN=56;BaseQRankSum=-0.042;DP=436;FS=13.251;HRun=1;HaplotypeScore=263.1142;InbreedingCoeff=-0.0384;MQ=47.61;MQ0=7;MQRankSum=-3.814;QD=33.44;ReadPosRankSum=1.897;VQSLOD=1.1075;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,19:20:51.11:661,51,0	1/1:0,7:7:21.07:289,21,0	0/1:5,11:3:24.49:24,0,25	0/1:14,6:10:34.01:36,0,34	1/1:0,18:18:39.13:532,39,0	1/1:0,25:25:72.24:980,72,0	1/1:1,14:15:39.01:492,39,0	1/1:0,4:4:9.03:118,9,0	1/1:0,21:21:60.20:830,60,0	1/1:1,7:8:24.01:284,24,0	1/1:1,7:8:15.05:191,15,0	1/1:0,19:19:54.18:735,54,0	1/1:0,20:20:60.20:829,60,0	1/1:0,25:25:75.15:979,75,0	1/1:0,19:19:54.17:717,54,0	1/1:0,19:19:57.19:770,57,0	1/1:1,11:12:18.03:219,18,0	1/1:0,8:8:24.08:334,24,0	1/1:0,9:9:27.09:376,27,0	1/1:0,20:20:57.19:778,57,0	1/1:0,14:14:32.89:398,33,0	1/1:0,9:9:27.09:356,27,0	1/1:0,7:7:18.06:233,18,0	1/1:0,8:8:11.97:142,12,0	1/1:1,17:18:38.99:504,39,0	1/1:0,26:26:78.26:1081,78,0	1/1:0,29:29:87.29:1203,87,0	1/1:0,12:12:36.12:492,36,0
chr10	8274783	.	ATAGC	A	28064.04	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=10.251;DP=737;FS=7.564;HRun=0;HaplotypeScore=142.0966;InbreedingCoeff=0.9845;MQ=87.55;MQ0=2;MQRankSum=-9.520;QD=44.13;ReadPosRankSum=7.545;VQSLOD=4.6338;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,123,3186	1/1:2,10:12:21.07:392,21,0	0/0:31,0:31:81.26:0,81,2048	0/0:27,0:27:75.26:0,75,1862	1/1:2,15:17:27.09:504,27,0	1/1:3,18:21:45.15:840,45,0	1/1:0,27:27:69.24:1280,69,0	1/1:1,36:37:99:1969,108,0	1/1:2,33:35:84.29:1567,84,0	1/1:2,21:23:63.22:1165,63,0	1/1:2,10:12:12.04:224,12,0	1/1:3,31:34:90.31:1680,90,0	1/1:4,35:39:99:1896,102,0	1/1:2,22:24:57.20:1064,57,0	1/1:2,33:35:87.20:1623,87,0	1/1:1,33:34:78.27:1456,78,0	1/1:0,34:33:93.32:1735,93,0	1/1:4,22:25:57.20:1063,57,0	1/1:4,15:19:48.14:837,48,0	1/1:1,21:22:42.14:784,42,0	1/1:4,28:32:72.25:1337,72,0	1/1:2,16:18:39.13:728,39,0	1/1:1,9:10:18.06:336,18,0	1/1:2,24:26:54.10:1008,54,0	1/1:1,21:21:48.16:895,48,0	1/1:3,29:32:84.22:1446,84,0	1/1:2,25:27:72.25:1342,72,0	1/1:0,18:18:48.16:896,48,0
chr10	8276607	.	TA	T	3642.83	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=7.327;DP=738;FS=2.638;HRun=7;HaplotypeScore=79.4376;InbreedingCoeff=0.9998;MQ=79.99;MQ0=0;MQRankSum=3.007;QD=26.40;ReadPosRankSum=2.539;VQSLOD=4.4694;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,135,1651	0/0:10,0:10:30.10:0,30,377	0/0:16,0:16:36.11:0,36,441	0/0:19,0:19:51.14:0,51,608	0/0:28,0:28:78.23:0,78,957	0/0:25,0:25:72.19:0,72,887	0/0:28,0:28:81.26:0,81,1016	0/0:31,0:31:84.24:0,84,1022	0/0:32,0:32:87.28:0,87,1094	1/1:2,18:20:54.12:551,54,0	1/1:0,19:19:48.10:490,48,0	0/0:26,0:26:72.23:0,72,906	0/0:38,0:38:90.29:0,90,1132	0/0:34,0:34:99:0,102,1258	1/1:2,37:39:99:1041,102,0	0/0:28,0:28:78.25:0,78,981	0/0:27,0:27:75.23:0,75,931	0/0:30,0:30:90.29:0,90,1126	0/0:26,0:26:63.20:0,63,790	0/0:22,0:22:60.19:0,60,754	0/0:26,0:26:72.23:0,72,906	1/1:2,14:16:42.09:429,42,0	1/1:3,25:28:63.14:643,63,0	1/1:0,16:16:48.11:490,48,0	0/0:17,0:17:51.16:0,51,640	0/0:34,0:34:93.30:0,93,1170	0/0:42,0:42:99:0,114,1421	0/0:13,0:13:39.12:0,39,491
chr10	8277350	.	AGG	A	670.71	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.567;DP=746;FS=9.735;HRun=3;HaplotypeScore=90.9843;InbreedingCoeff=0.9940;MQ=86.47;MQ0=1;MQRankSum=-2.642;QD=26.83;ReadPosRankSum=2.231;VQSLOD=1.9183;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,129,2364	0/0:11,0:11:30.10:0,30,573	0/0:27,0:27:81.28:0,81,1532	0/0:25,0:25:69.24:0,69,1306	0/0:31,0:31:87.28:0,87,1546	0/0:26,0:26:78.26:0,78,1459	0/0:29,0:29:87.28:0,87,1648	0/0:39,0:39:99:0,108,1975	0/0:37,0:37:99:0,108,2063	0/0:32,0:32:96.32:0,96,1763	0/0:22,0:22:57.20:0,57,1072	0/0:30,0:30:90.30:0,90,1700	0/0:33,0:33:99:0,99,1878	0/0:32,0:32:93.32:0,93,1768	0/0:33,0:33:99:0,99,1901	0/0:27,0:27:81.28:0,81,1565	0/0:44,0:44:99:0,126,2434	0/0:14,0:14:42.14:0,42,810	0/0:14,0:14:42.14:0,42,775	0/0:24,0:24:69.20:0,69,1315	1/1:1,24:24:57.18:766,57,0	0/0:27,0:27:78.27:0,78,1430	0/0:23,0:23:69.23:0,69,1232	0/0:22,0:22:63.18:0,63,1149	0/0:20,0:20:57.18:0,57,1003	0/0:22,0:22:57.18:0,57,1035	0/0:24,0:24:69.24:0,69,1309	0/0:8,0:8:19.70:0,20,404
chr10	8277355	.	C	CA	754.02	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.688;DP=652;FS=21.875;HRun=1;HaplotypeScore=69.2709;InbreedingCoeff=0.9955;MQ=91.25;MQ0=1;MQRankSum=-3.203;QD=27.93;ReadPosRankSum=0.601;VQSLOD=2.1506;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:87.29:0,87,1216	0/0:10,0:10:30.10:0,30,420	0/0:26,0:26:75.19:0,75,993	0/0:29,0:29:77.06:0,77,961	0/0:20,0:20:48.16:0,48,669	0/0:23,0:23:69.22:0,69,946	0/0:29,0:29:87.27:0,87,1199	0/0:37,0:37:84.28:0,84,1175	0/0:34,0:34:99:0,102,1406	0/0:22,0:22:57.19:0,57,784	0/0:17,0:17:39.13:0,39,545	0/0:28,0:28:81.27:0,81,1132	0/0:31,0:31:90.30:0,90,1255	0/0:30,0:30:87.29:0,87,1216	0/0:32,0:32:93.30:0,93,1283	0/0:29,0:29:84.27:0,84,1158	0/0:43,0:43:99:0,129,1728	0/0:14,0:14:42.12:0,42,569	0/0:14,0:14:39.12:0,39,532	0/0:22,0:22:63.21:0,63,881	1/1:3,24:26:63.16:849,63,0	0/0:18,0:18:48.16:0,48,671	0/0:15,0:15:42.12:0,42,569	0/0:21,0:21:63.21:0,63,876	0/0:11,0:11:33.11:0,33,461	0/0:11,0:11:33.11:0,33,462	0/0:22,0:22:66.22:0,66,917	0/0:8,0:8:21.96:0,22,293
chr10	8277607	.	C	CT	786.84	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-6.415;DP=754;FS=0.000;HRun=3;HaplotypeScore=68.4135;InbreedingCoeff=0.9995;MQ=86.17;MQ0=0;MQRankSum=-2.289;QD=35.77;ReadPosRankSum=0.464;VQSLOD=4.0706;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:87.21:0,87,1004	0/0:12,0:12:36.10:0,36,420	0/0:23,0:23:60.17:0,60,706	0/0:29,0:29:69.04:0,69,781	0/0:39,0:39:99:0,117,1389	0/0:36,0:36:99:0,105,1259	0/0:28,0:28:78.23:0,78,924	0/0:33,0:33:90.23:0,90,1035	0/0:13,0:13:36.11:0,36,431	0/0:30,0:30:87.27:0,87,1044	0/0:34,0:34:99:0,99,1163	0/0:27,0:27:78.23:0,78,926	0/0:27,0:27:78.24:0,78,933	0/0:24,0:24:69.19:0,69,806	0/0:35,0:35:96.23:0,96,1095	0/0:29,0:29:87.25:0,87,1032	0/0:20,0:20:60.17:0,60,707	0/0:21,0:21:63.19:0,63,755	0/0:19,0:19:57.16:0,57,672	0/0:32,0:32:93.26:0,93,1093	1/1:0,22:22:63.21:882,63,0	0/0:24,0:24:66.19:0,66,782	0/0:33,0:33:93.29:0,93,1115	0/0:24,0:24:72.20:0,72,851	0/0:33,0:33:93.28:0,93,1115	0/0:26,0:26:72.20:0,72,845	0/0:40,0:40:99:0,114,1319	0/0:12,0:12:33.10:0,33,396
chr10	8277932	.	C	CAA	2617.69	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-5.699;DP=564;FS=14.640;HRun=11;HaplotypeScore=73.3535;InbreedingCoeff=0.9900;MQ=77.96;MQ0=0;MQRankSum=-0.202;QD=26.71;ReadPosRankSum=1.118;VQSLOD=2.1814;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:60.03:0,60,582	0/0:15,0:15:39.06:0,39,378	0/0:20,0:18:29.91:0,30,272	0/0:15,0:16:11.47:0,11,132	0/0:20,0:21:53.81:0,54,506	0/0:22,0:23:68.82:0,69,640	0/0:18,0:18:42.02:0,42,407	0/0:35,0:35:84:0,84,794	0/0:18,0:18:32.04:0,32,368	1/1:3,10:15:36.89:436,37,0	1/1:4,16:20:51.13:710,51,0	0/0:11,0:13:23.71:0,24,265	0/0:24,0:24:51.81:0,52,565	0/0:16,0:18:38.48:0,38,344	1/1:3,16:20:42.14:594,42,0	0/0:27,0:27:63:0,63,651	0/0:18,0:18:50.75:0,51,477	0/0:25,0:25:62.86:0,63,598	0/0:20,0:20:50.83:0,51,474	0/0:15,0:16:38.75:0,39,360	0/0:4,0:14:27.41:0,27,119	1/1:6,9:16:26.58:356,27,0	1/1:3,15:19:36.17:483,36,0	1/1:1,6:8:17.55:226,18,0	0/0:31,0:34:86.80:0,87,875	0/0:17,0:18:35.98:0,36,398	0/0:26,0:26:69.08:0,69,663	0/0:20,0:21:62.84:0,63,594
chr10	8279067	.	GC	G	3137.94	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.699;DP=688;FS=3.998;HRun=1;HaplotypeScore=65.5071;InbreedingCoeff=0.9942;MQ=89.67;MQ0=0;MQRankSum=-2.776;QD=36.92;ReadPosRankSum=4.195;VQSLOD=4.1195;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:87.26:0,87,1361	0/0:13,0:13:36.12:0,36,558	0/0:20,0:20:54.33:0,54,867	0/0:31,0:31:73.44:0,73,1104	1/1:0,20:20:60.13:807,60,0	0/0:33,0:33:99:0,99,1519	0/0:23,0:23:66.19:0,66,1002	0/0:35,0:35:99:0,105,1595	0/0:26,0:26:78.27:0,78,1247	0/0:26,0:26:75.26:0,75,1197	0/0:13,0:13:39.13:0,39,619	0/0:25,0:25:72.21:0,72,1099	0/0:35,0:35:99:0,105,1630	0/0:31,0:31:90.31:0,90,1436	0/0:44,0:44:99:0,132,2079	1/1:0,40:40:99:1468,105,0	0/0:29,0:29:87.28:0,87,1365	1/1:1,24:25:72.24:1006,72,0	0/0:20,0:20:58.44:0,58,912	0/0:28,0:28:84.27:0,84,1315	0/0:12,0:12:36.12:0,36,568	0/0:20,0:20:60.20:0,60,946	0/0:20,0:20:60.20:0,60,955	0/0:25,0:25:75.22:0,75,1150	0/0:13,0:13:39.13:0,39,619	0/0:18,0:18:54.17:0,54,829	0/0:29,0:29:87.28:0,87,1366	0/0:5,0:5:15.03:0,15,212
chr10	8281102	.	A	ATTGTTGTTG	20251.20	PASS	AB=0.621;AC=29;AF=0.518;AN=56;BaseQRankSum=-13.900;DP=794;FS=4.223;HRun=0;HaplotypeScore=172.4627;InbreedingCoeff=0.9210;MQ=60.98;MQ0=1;MQRankSum=-12.958;QD=47.43;ReadPosRankSum=-1.721;VQSLOD=4.2144;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:84.03:0,84,2241	1/1:7,12:19:21.07:972,21,0	0/0:29,0:21:26.19:0,26,506	0/0:31,0:28:44.83:0,45,1006	0/0:35,0:36:90.22:0,90,2158	1/1:5,15:22:27.09:1248,27,0	1/1:7,14:21:18.06:758,18,0	1/1:35,0:35:51.12:684,51,0	1/1:11,12:27:30.10:1373,30,0	0/0:38,0:38:78.26:0,78,1999	0/0:28,0:28:72.20:0,72,1817	1/1:10,24:38:42.14:1939,42,0	1/1:8,20:33:41.91:1779,42,0	1/1:13,16:29:27.09:1249,27,0	0/0:29,0:28:75.22:0,75,1891	0/0:34,0:34:81.25:0,81,2147	1/1:13,15:33:18.06:814,18,0	0/0:12,0:12:27.09:0,27,752	1/1:13,9:26:39.05:1285,39,0	1/1:13,27:42:75.05:2921,75,0	0/0:17,0:17:42.13:0,42,1112	0/0:25,0:25:54.17:0,54,1454	0/0:22,0:22:44.92:0,45,966	0/0:33,0:33:87.23:0,87,2171	1/1:9,12:25:15.05:692,15,0	0/1:14,21:36:24.64:1897,0,25	1/1:10,20:34:42.62:1946,43,0	1/1:1,6:7:15.05:695,15,0
chr10	8283828	.	C	CAG	1827.44	PASS	AB=0.772;AC=10;AF=0.179;AN=56;BaseQRankSum=-3.556;DP=733;FS=2.725;HRun=0;HaplotypeScore=96.6784;InbreedingCoeff=0.5322;MQ=63.67;MQ0=8;MQRankSum=0.027;QD=11.49;ReadPosRankSum=1.276;VQSLOD=3.5767;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:63.08:0,63,769	0/1:7,1:8:15.04:188,0,15	1/1:15,0:6:5.12:20,5,0	0/1:23,0:14:5.38:5,0,16	0/0:40,0:40:83.04:0,83,966	1/1:5,22:26:27.09:435,27,0	0/1:10,15:25:21.29:179,0,21	0/0:27,0:27:44.42:0,44,519	0/0:20,0:20:45.14:0,45,545	0/0:36,0:35:75.22:0,75,901	0/0:24,0:25:54.47:0,54,631	0/0:28,0:28:67.03:0,67,773	0/0:15,0:15:36.05:0,36,406	0/0:29,2:31:71.90:0,72,817	0/0:35,0:35:87.08:0,87,1015	0/0:21,0:22:57.01:0,57,667	1/1:9,22:31:48.14:748,48,0	0/0:23,0:23:54.17:0,54,652	0/0:26,0:24:34.84:0,35,357	0/0:31,0:32:81.02:0,81,907	0/0:0,0:11:19.89:0,20,98	0/0:31,0:31:60.17:0,60,711	0/0:25,0:25:51.15:0,51,617	0/0:18,0:20:47.81:0,48,531	0/1:8,21:29:6.30:406,0,6	0/0:37,0:40:88.88:0,89,985	0/0:33,0:33:75.23:0,75,908	0/0:19,0:19:42.12:0,42,505
chr10	8285319	.	A	AAG	41.03	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=1.546;DP=704;FS=1.642;HRun=0;HaplotypeScore=129.3108;InbreedingCoeff=0.8772;MQ=82.50;MQ0=0;MQRankSum=-1.055;QD=10.26;ReadPosRankSum=-2.553;VQSLOD=3.2843;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:84.24:0,84,1317	0/0:6,0:6:17.99:0,18,154	0/0:22,0:22:60.20:0,60,975	0/0:20,0:20:50.30:0,50,789	0/0:37,0:37:99:0,108,960	0/0:32,0:32:93.01:0,93,826	0/0:17,0:17:49.22:0,49,419	0/0:36,0:36:99:0,105,890	0/0:29,0:29:87.08:0,87,827	0/0:31,0:31:92.82:0,93,784	0/0:29,0:29:86.99:0,87,764	0/0:31,0:31:91.52:0,92,802	0/0:25,0:25:75.03:0,75,689	0/0:31,0:31:90.02:0,90,810	0/0:26,0:26:77.98:0,78,685	0/0:23,0:23:68.97:0,69,604	0/0:27,0:27:81.02:0,81,727	0/0:19,0:19:56.98:0,57,508	0/0:23,0:23:61.21:0,61,511	0/0:23,0:23:68.97:0,69,598	1/1:0,4:4:6.02:121,6,0	0/0:24,0:24:72.06:0,72,692	0/0:27,0:27:78.05:0,78,719	0/0:27,0:27:76.23:0,76,693	0/0:29,0:29:63.99:0,64,722	0/0:32,0:32:92.92:0,93,815	0/0:31,0:31:84.53:0,85,792	0/0:14,0:14:42.07:0,42,422
chr10	8285846	.	CA	C	5330.46	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=12.820;DP=682;FS=11.145;HRun=8;HaplotypeScore=67.7776;InbreedingCoeff=0.9945;MQ=91.75;MQ0=0;MQRankSum=-0.894;QD=25.26;ReadPosRankSum=1.702;VQSLOD=5.1747;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,1:46:99:0,109,1561	0/0:9,0:9:21.05:0,21,243	0/0:30,0:30:68:0,68,767	0/0:26,0:26:38.92:0,39,651	1/1:0,25:25:75.12:724,75,0	0/0:22,0:22:60.18:0,60,725	0/0:19,0:19:48.14:0,48,569	0/0:30,0:30:75.21:0,75,886	0/0:22,0:22:66.19:0,66,786	1/1:1,24:25:72.12:695,72,0	1/1:2,26:28:72.11:695,72,0	0/0:21,0:21:57.13:0,57,672	0/0:34,0:35:96.15:0,96,1125	0/0:19,0:19:54.17:0,54,651	1/1:1,28:29:78.12:753,78,0	1/1:4,22:26:60.09:579,60,0	0/0:23,0:23:66.20:0,66,797	1/1:0,10:10:30.05:290,30,0	0/0:22,0:22:54.17:0,54,652	0/0:27,0:27:70.09:0,70,824	0/0:33,0:33:84.25:0,84,1003	1/1:1,16:17:42.06:406,42,0	1/1:4,17:21:48.07:464,48,0	1/1:3,27:30:75.11:724,75,0	0/0:20,0:20:57.17:0,57,688	0/0:29,0:29:78.24:0,78,942	0/0:34,0:34:70.31:0,70,1108	0/0:4,0:4:12.04:0,12,145
chr10	8286498	.	GA	G	337.24	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.322;DP=670;FS=2.440;HRun=4;HaplotypeScore=62.5952;InbreedingCoeff=0.9948;MQ=77.57;MQ0=0;MQRankSum=-2.200;QD=24.09;ReadPosRankSum=0.216;VQSLOD=2.5071;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:75.25:0,75,1042	0/0:9,0:9:27.09:0,27,378	0/0:20,0:20:60.18:0,60,816	0/0:14,0:14:39.09:0,39,524	0/0:37,0:37:99:0,108,1463	0/0:31,0:31:87.26:0,87,1171	0/0:17,0:17:51.14:0,51,667	0/0:39,0:38:99:0,117,1611	0/0:18,0:18:48.15:0,48,655	0/0:36,0:36:99:0,105,1432	0/0:22,0:22:60.20:0,60,840	0/0:21,0:21:60.16:0,60,787	0/0:32,0:32:93.27:0,93,1280	0/0:19,0:19:57.19:0,57,798	0/0:28,0:28:78.26:0,78,1092	0/0:20,0:20:57.19:0,57,798	0/0:20,0:20:54.16:0,54,723	0/0:25,0:25:66.18:0,66,882	0/0:19,0:19:54.18:0,54,756	0/0:29,0:29:84.28:0,84,1175	1/1:0,14:14:36.11:432,36,0	0/0:28,0:28:78.24:0,78,1059	0/0:33,0:33:96.32:0,96,1340	0/0:17,0:17:51.17:0,51,714	0/0:29,0:29:87.27:0,87,1198	0/0:34,0:34:99:0,99,1351	0/0:26,0:26:78.23:0,78,1058	0/0:7,0:7:21.07:0,21,294
chr10	8286645	.	GAAGA	G	688.98	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.320;DP=722;FS=1.033;HRun=0;HaplotypeScore=115.4531;InbreedingCoeff=0.9954;MQ=83.32;MQ0=0;MQRankSum=-3.613;QD=36.26;ReadPosRankSum=2.603;VQSLOD=3.7263;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,102,2662	0/0:11,0:11:30.10:0,30,798	0/0:38,0:36:93.25:0,93,2125	0/0:26,0:27:69.09:0,69,1402	0/0:35,0:35:99:0,102,2674	0/0:33,0:33:96.31:0,96,2440	0/0:23,0:23:63.22:0,63,1623	0/0:37,0:37:96.30:0,96,2263	0/0:29,0:29:78.26:0,78,1965	0/0:28,0:28:84.27:0,84,2154	0/0:28,0:28:72.23:0,72,1800	0/0:24,0:24:69.24:0,69,1811	0/0:34,0:34:93.28:0,93,2366	0/0:23,0:23:66.21:0,66,1602	0/0:35,0:35:99:0,99,2590	0/0:19,0:19:54.16:0,54,1308	0/0:16,0:16:48.10:0,48,1112	0/0:20,0:20:57.12:0,57,1286	0/0:22,0:22:60.19:0,60,1430	0/0:36,0:36:99:0,99,2511	1/1:1,18:19:42.14:784,42,0	0/0:25,0:25:72.25:0,72,1860	0/0:29,0:29:81.27:0,81,2107	0/0:20,0:20:57.18:0,57,1464	0/0:17,0:17:45.14:0,45,1058	0/0:26,0:26:75.25:0,75,1881	0/0:23,0:23:66.23:0,66,1759	0/0:10,0:10:21.07:0,21,560
chr10	8287075	.	CTA	C	2000.45	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=4.473;DP=703;FS=5.089;HRun=0;HaplotypeScore=102.0518;InbreedingCoeff=0.9908;MQ=82.96;MQ0=0;MQRankSum=-1.615;QD=33.34;ReadPosRankSum=1.866;VQSLOD=6.1576;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:90.28:0,90,1595	0/0:5,0:5:15.05:0,15,266	0/0:22,0:22:63.20:0,63,1087	0/0:19,0:19:24.71:0,25,772	1/1:1,25:26:63.21:926,63,0	0/0:30,0:30:90.29:0,90,1651	0/0:26,0:26:75.26:0,75,1389	0/0:46,0:46:99:0,132,2377	0/0:22,0:22:60.16:0,60,1005	0/0:23,0:23:66.22:0,66,1181	0/0:17,0:17:48.16:0,48,869	0/0:29,0:29:81.26:0,81,1476	0/0:25,0:25:72.25:0,72,1348	0/0:25,0:25:69.21:0,69,1222	0/0:25,0:25:75.26:0,75,1403	1/1:4,22:26:69.20:972,69,0	0/0:21,0:21:60.21:0,60,1123	1/1:3,5:8:18.04:244,18,0	0/0:20,0:20:54.19:0,54,1008	0/0:42,0:42:99:0,123,2207	0/0:23,0:23:39.13:0,39,706	0/0:21,0:21:63.22:0,63,1179	0/0:27,0:27:75.22:0,75,1340	0/0:21,0:21:60.19:0,60,1091	0/0:26,0:26:78.25:0,78,1418	0/0:34,0:34:99:0,99,1818	0/0:44,0:44:99:0,123,2187	0/0:18,0:17:54.19:0,54,1006
chr10	8287120	.	A	ATATGTG	84.28	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=0.640;DP=783;FS=0.000;HRun=0;HaplotypeScore=219.4476;InbreedingCoeff=0.8809;MQ=61.89;MQ0=4;MQRankSum=-0.867;QD=2.55;ReadPosRankSum=-1.522;VQSLOD=1.8132;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,105,2266	0/0:9,0:9:24.01:0,24,523	0/0:29,0:17:38.92:0,39,725	0/0:30,0:16:42.11:0,42,726	0/0:24,0:24:65.24:0,65,1306	0/0:32,0:32:90.31:0,90,2039	0/0:32,0:32:46.38:0,46,1584	0/0:39,0:39:99:0,114,2318	0/0:25,0:25:69.22:0,69,1544	0/0:29,0:29:87.28:0,87,1928	0/0:15,0:15:38.72:0,39,878	0/0:29,0:29:75.19:0,75,1691	0/0:37,0:37:99:0,102,2251	0/0:25,0:25:63.22:0,63,1424	0/0:30,0:30:90.29:0,90,1975	0/0:41,0:41:99:0,110,2221	0/0:18,0:18:44.85:0,45,953	0/0:17,0:17:41.93:0,42,826	0/0:24,0:24:65.68:0,66,1214	0/0:31,0:31:87.74:0,88,1950	1/1:3,25:33:5.96:165,6,0	0/0:30,0:30:81.26:0,81,1861	0/0:21,0:21:48.16:0,48,1079	0/0:26,0:26:72.19:0,72,1614	0/0:24,0:24:72.23:0,72,1576	0/0:33,0:33:96.30:0,96,2039	0/0:43,0:43:99:0,126,2588	0/0:15,0:15:30:0,30,461
chr10	8287124	.	GTA	G	1253.64	PASS	AB=0.991;AC=17;AF=0.304;AN=56;BaseQRankSum=9.537;DP=768;FS=19.228;HRun=0;HaplotypeScore=142.9697;InbreedingCoeff=-0.2461;MQ=59.55;MQ0=4;MQRankSum=1.849;QD=2.84;ReadPosRankSum=6.136;VQSLOD=1.1122;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:96.07:0,96,1504	0/1:9,0:9:11.14:50,0,11	0/0:27,0:13:32.94:0,33,363	0/0:31,0:16:38.13:0,38,528	0/0:22,0:23:28.21:0,28,243	0/1:33,0:33:99:111,0,162	0/1:31,0:31:99:116,0,132	0/1:35,0:35:4.25:4,0,505	0/1:24,0:24:38.21:132,0,38	0/0:32,0:32:65.57:0,66,1280	0/0:14,0:14:28.87:0,29,639	0/1:29,0:29:35.60:150,0,36	0/1:34,2:36:99:229,0,165	0/1:27,0:27:81.13:81,0,176	0/0:29,0:29:76.91:0,77,1401	0/0:39,0:39:91.43:0,91,455	0/1:18,1:19:39.02:39,0,129	0/0:17,0:17:30.73:0,31,177	0/0:20,0:20:5.26:0,5,274	0/1:31,0:31:85.30:85,0,192	1/1:33,0:33:7.38:67,7,0	0/0:31,0:31:71.71:0,72,1278	0/0:20,0:20:26.59:0,27,547	0/1:25,0:25:1.09:1,0,801	0/1:26,0:26:94.37:94,0,132	0/1:31,1:32:82.63:83,0,316	0/1:44,0:44:99:135,0,199	0/1:8,0:8:10.09:33,0,10
chr10	8287126	.	ATG	A	7962.05	PASS	AB=0.823;AC=38;AF=0.679;AN=56;BaseQRankSum=3.285;DP=772;FS=14.951;HRun=0;HaplotypeScore=124.3737;InbreedingCoeff=0.7220;MQ=59.52;MQ0=4;MQRankSum=2.552;QD=15.22;ReadPosRankSum=4.086;VQSLOD=4.0538;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:40.75:0,41,1042	1/1:1,7:9:20.89:223,21,0	0/0:29,0:13:9.03:0,9,130	0/0:33,0:18:27.09:0,27,390	1/1:8,0:23:28.72:168,29,0	1/1:9,21:32:62.17:648,62,0	1/1:9,18:31:50.48:509,50,0	1/1:23,12:36:17.43:353,17,0	1/1:4,19:24:53.99:606,54,0	0/0:31,1:32:28.37:0,28,869	0/0:13,2:15:1.29:0,1,449	1/1:5,20:28:59.35:633,59,0	1/1:10,21:33:71.88:791,72,0	1/1:11,16:27:24.38:403,24,0	0/0:29,1:30:37.40:0,37,1018	1/1:9,0:39:67.54:358,68,0	1/1:8,10:18:23.86:257,24,0	1/1:6,0:17:25.21:124,25,0	1/1:14,7:21:17.94:190,18,0	1/1:9,20:32:15.20:560,15,0	0/0:34,0:34:2.41:0,2,6	0/0:31,1:33:4.42:0,4,940	0/1:18,4:22:37.11:37,0,319	0/1:18,6:24:99:117,0,591	1/1:8,15:25:47.81:515,48,0	1/1:15,14:30:47.95:522,48,0	1/1:12,27:42:75.19:808,75,0	1/1:3,7:10:12.04:139,12,0
chr10	8287784	.	TA	T	1205.90	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.272;DP=849;FS=0.000;HRun=1;HaplotypeScore=82.1442;InbreedingCoeff=0.9826;MQ=71.42;MQ0=1;MQRankSum=0.367;QD=34.45;ReadPosRankSum=0.760;VQSLOD=3.4778;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:61,0:61:99:0,184,2899	0/0:8,0:8:24.08:0,24,383	0/0:18,0:18:54.18:0,54,830	0/0:25,0:25:62.84:0,63,1009	0/0:22,0:22:66.23:0,66,1053	0/0:31,0:31:90.29:0,90,1414	0/0:24,0:24:72.21:0,72,1102	0/0:26,0:26:78.25:0,78,1210	0/0:43,0:43:99:0,129,2014	0/0:30,0:30:87.30:0,87,1391	0/0:22,0:22:63.21:0,63,1007	0/0:36,0:36:99:0,108,1656	0/0:31,0:31:93.32:0,93,1464	0/0:38,0:38:99:0,111,1744	0/0:39,0:39:99:0,117,1847	0/0:44,0:44:99:0,132,2010	0/0:50,0:50:99:0,150,2335	0/0:42,0:41:99:0,120,1877	0/0:27,0:27:81.13:0,81,1240	0/0:28,0:28:84.24:0,84,1291	1/1:0,35:35:93.31:1301,93,0	0/0:23,0:23:69.24:0,69,1098	0/0:28,0:28:81.26:0,81,1265	0/0:38,0:38:99:0,114,1819	0/0:20,0:20:60.20:0,60,959	0/0:28,0:28:84.29:0,84,1343	0/0:27,0:27:81.25:0,81,1269	0/0:5,0:5:15.05:0,15,236
chr10	8288750	.	T	TGG	517.51	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-5.255;DP=651;FS=4.109;HRun=5;HaplotypeScore=80.3765;InbreedingCoeff=0.9795;MQ=82.72;MQ0=0;MQRankSum=-2.142;QD=30.44;ReadPosRankSum=0.699;VQSLOD=3.2106;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,102,1281	0/0:6,0:6:18.06:0,18,229	0/0:24,0:24:72.15:0,72,871	0/0:19,0:19:28.71:0,29,331	0/0:33,0:33:90.15:0,90,1032	0/0:28,0:28:78.15:0,78,959	0/0:34,0:34:96.27:0,96,1192	0/0:18,0:18:45.13:0,45,558	0/0:20,0:20:57.17:0,57,712	0/0:25,0:25:69.20:0,69,856	0/0:17,0:17:45.14:0,45,572	0/0:23,0:23:66.20:0,66,826	0/0:22,0:22:63.16:0,63,758	0/0:27,0:27:75.24:0,75,953	0/0:34,0:34:99:0,99,1193	0/0:23,0:23:63.18:0,63,776	0/0:26,0:26:72.23:0,72,916	0/0:23,0:23:63.13:0,63,757	0/0:14,0:14:42.12:0,42,511	0/0:30,0:30:87.28:0,87,1107	1/1:1,16:17:16.43:607,16,0	0/0:25,0:25:69.18:0,69,851	0/0:20,0:20:54.11:0,54,654	0/0:24,0:24:69.20:0,69,865	0/0:24,0:24:66.17:0,66,800	0/0:30,0:30:78.23:0,78,970	0/0:16,0:16:42.11:0,42,521	0/0:12,0:12:36.12:0,36,458
chr10	8290150	.	A	AC	1864.34	PASS	AB=0.994;AC=23;AF=0.411;AN=56;BaseQRankSum=3.482;DP=748;FS=33.462;HRun=0;HaplotypeScore=106.5043;InbreedingCoeff=0.4181;MQ=64.81;MQ0=1;MQRankSum=2.539;QD=4.34;ReadPosRankSum=1.464;VQSLOD=1.7053;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:80.45:0,80,786	0/1:11,0:11:1.60:25,0,2	0/0:32,0:16:40.89:0,41,310	0/1:17,0:8:5.61:6,0,47	0/0:32,0:32:91.38:0,91,726	0/1:23,0:23:37.16:135,0,37	1/1:23,0:23:13.61:132,14,0	1/1:29,2:31:38.93:268,39,0	0/1:26,0:26:14.26:71,0,14	0/0:22,0:22:62.29:0,62,642	0/0:31,0:31:89.23:0,89,829	0/1:34,2:36:6.94:205,0,7	0/1:24,0:24:18.73:50,0,19	1/1:24,1:25:24.34:129,24,0	0/0:39,0:39:99:0,108,1218	0/0:29,0:29:86.82:0,87,794	1/1:23,0:23:15.91:100,16,0	0/0:17,0:17:47.76:0,48,366	1/1:28,0:28:29.36:251,29,0	0/1:37,0:37:11.29:66,0,11	0/0:17,0:17:43.60:0,44,295	0/0:31,0:31:87.51:0,88,959	0/0:21,0:21:59.76:0,60,624	0/0:14,0:14:39.35:0,39,355	0/1:28,0:28:11.44:145,0,11	1/1:31,0:31:4.03:181,4,0	0/1:48,0:48:1.14:145,0,1	1/1:19,0:19:22.36:149,22,0
chr10	8290789	.	T	TC	7977.25	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=17.848;DP=684;FS=13.247;HRun=0;HaplotypeScore=121.7143;InbreedingCoeff=0.9997;MQ=90.80;MQ0=0;MQRankSum=-5.031;QD=36.43;ReadPosRankSum=4.147;VQSLOD=3.2447;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,117,1620	0/0:15,0:15:45.15:0,45,628	0/0:31,0:31:93.29:0,93,1250	0/0:24,0:24:60.88:0,61,859	1/1:0,18:18:45.15:635,45,0	0/0:23,0:23:69.21:0,69,947	0/0:21,0:21:63.20:0,63,863	0/0:27,0:27:81.26:0,81,1118	0/0:29,0:29:87.25:0,87,1178	1/1:5,9:14:36.09:470,36,0	1/1:0,9:10:27.09:376,27,0	0/0:36,0:36:99:0,108,1493	0/0:23,0:23:69.21:0,69,946	0/0:32,0:32:96.29:0,96,1294	1/1:1,28:29:81.27:1155,81,0	1/1:4,31:35:56.29:1312,56,0	0/0:26,0:26:78.24:0,78,1067	1/1:1,17:18:33.11:472,33,0	0/0:22,0:22:66.21:0,66,907	0/0:30,0:30:90.30:0,90,1255	1/1:0,27:27:72.24:1020,72,0	1/1:0,26:26:69.23:997,69,0	1/1:1,15:16:45.15:639,45,0	1/1:0,26:26:61.27:902,61,0	0/0:16,0:16:48.14:0,48,652	0/0:26,1:27:35.05:0,35,990	0/0:28,0:28:81.26:0,81,1115	0/0:13,0:13:39.13:0,39,545
chr10	8295126	.	TTTAAAATGAG	T	15561.09	PASS	AC=32;AF=0.593;AN=54;BaseQRankSum=11.823;DP=402;FS=143.623;HRun=0;HaplotypeScore=141.2546;InbreedingCoeff=0.9766;MQ=100.24;MQ0=0;MQRankSum=-11.417;QD=71.71;ReadPosRankSum=5.871;VQSLOD=1.9727;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,19:24:45.15:1468,45,0	1/1:0,4:4:12.04:395,12,0	0/0:30,0:26:81.25:0,81,3202	0/0:27,0:23:75.26:0,75,3361	0/0:15,0:15:39.13:0,39,1715	1/1:1,11:12:24.08:778,24,0	1/1:3,12:15:33.11:1085,33,0	1/1:3,5:8:15.02:368,15,0	1/1:5,9:14:27.09:888,27,0	0/0:18,0:18:48.16:0,48,2505	0/0:11,0:11:33.11:0,33,1512	1/1:2,16:18:42.14:1382,42,0	1/1:3,15:18:36.12:1176,36,0	1/1:4,15:19:33.11:1086,33,0	0/0:15,0:15:45.15:0,45,2214	0/0:13,0:13:36.12:0,36,1762	1/1:1,13:14:39.13:1282,39,0	0/0:9,0:9:27.09:0,27,1283	1/1:1,11:12:30.09:813,30,0	1/1:1,9:10:24.08:767,24,0	./.	0/0:16,0:16:48.16:0,48,2336	0/0:18,0:18:54.18:0,54,2664	0/0:10,0:10:27.09:0,27,1368	1/1:2,13:15:39.13:1283,39,0	1/1:1,13:14:39.12:1211,39,0	1/1:2,16:18:42.14:1381,42,0	1/1:0,2:2:6.02:198,6,0
chr10	8296619	.	A	AT	22936.86	PASS	AB=0.818;AC=55;AF=0.982;AN=56;BaseQRankSum=-2.410;DP=614;FS=0.000;HRun=2;HaplotypeScore=124.0057;InbreedingCoeff=-0.0115;MQ=66.73;MQ0=0;MQRankSum=-2.405;QD=37.36;ReadPosRankSum=1.961;VQSLOD=4.3942;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,27:28:78.13:1071,78,0	1/1:0,8:8:24.08:346,24,0	1/1:4,6:10:21.06:284,21,0	0/1:7,2:9:2.02:99,0,2	1/1:1,21:22:57.19:821,57,0	1/1:1,22:23:60.20:864,60,0	1/1:4,19:23:57.15:788,57,0	1/1:0,26:27:78.23:1086,78,0	1/1:3,20:23:66.19:904,66,0	1/1:1,23:24:66.22:950,66,0	1/1:1,15:16:39.13:562,39,0	1/1:6,32:38:96.07:1255,96,0	1/1:3,36:39:99:1469,108,0	1/1:2,28:30:81.27:1146,81,0	1/1:4,32:36:99:1350,99,0	1/1:4,20:24:63.18:884,63,0	1/1:1,19:19:48.16:690,48,0	1/1:0,21:20:63.21:907,63,0	1/1:1,17:18:51.17:728,51,0	1/1:2,13:15:39.13:562,39,0	1/1:0,32:33:90.19:1113,90,0	1/1:0,17:17:51.17:734,51,0	1/1:1,9:10:30.01:399,30,0	1/1:2,21:23:60.16:828,60,0	1/1:1,10:11:27.09:389,27,0	1/1:1,22:23:69.23:988,69,0	1/1:1,35:36:99:1420,99,0	1/1:0,7:7:21.07:302,21,0
chr10	8300150	.	C	CA	7116.26	PASS	AB=0.794;AC=40;AF=0.714;AN=56;BaseQRankSum=-7.687;DP=494;FS=0.462;HRun=10;HaplotypeScore=52.8986;InbreedingCoeff=0.7122;MQ=70.01;MQ0=0;MQRankSum=-0.533;QD=17.48;ReadPosRankSum=0.161;VQSLOD=5.1385;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,27:27:54.14:576,54,0	1/1:2,9:11:2.42:231,2,0	0/1:7,0:6:3.71:4,0,60	0/0:7,0:8:11:0,11,77	1/1:7,0:20:25.19:159,25,0	1/1:5,12:17:32.95:334,33,0	1/1:2,21:23:54.14:576,54,0	1/1:6,19:26:25.56:489,26,0	1/1:4,10:14:24.06:255,24,0	0/0:19,0:20:52.94:0,53,422	0/1:11,1:12:2.02:2,0,192	0/1:7,10:18:11.03:333,0,11	1/1:5,13:18:36.09:384,36,0	1/1:8,6:14:23.99:241,24,0	0/0:14,0:14:32.95:0,33,271	1/1:6,1:20:17.04:85,17,0	1/1:2,19:21:53.97:558,54,0	1/1:4,0:16:16.08:84,16,0	0/1:4,7:11:0.59:199,0,1	1/1:11,17:28:41.42:619,41,0	1/1:0,9:9:18.05:192,18,0	0/0:17,0:18:40.98:0,41,326	0/0:21,0:21:41.85:0,42,337	0/0:6,0:6:14.97:0,15,120	1/1:8,21:30:56.97:585,57,0	1/1:10,20:32:56.79:563,57,0	1/1:5,20:25:26.49:487,26,0	1/1:2,6:8:15.04:160,15,0
chr10	8300530	.	TG	T	2246.70	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=11.403;DP=705;FS=2.346;HRun=1;HaplotypeScore=75.4393;InbreedingCoeff=0.9970;MQ=82.54;MQ0=0;MQRankSum=1.469;QD=36.83;ReadPosRankSum=2.031;VQSLOD=4.2371;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,126,1975	0/0:11,0:11:33.11:0,33,527	0/0:22,0:22:65.22:0,65,974	0/0:26,0:26:69.12:0,69,1086	1/1:0,22:22:66.22:923,66,0	0/0:22,0:22:66.20:0,66,1024	0/0:27,0:27:78.27:0,78,1242	0/0:31,0:31:90.30:0,90,1418	0/0:28,0:28:84.27:0,84,1320	0/0:31,0:31:93.31:0,93,1462	0/0:24,0:24:72.25:0,72,1151	0/0:26,0:26:78.24:0,78,1201	0/0:29,0:29:87.30:0,87,1387	0/0:38,0:38:99:0,114,1797	0/0:27,0:27:81.26:0,81,1269	1/1:0,18:18:54.18:754,54,0	0/0:23,0:23:66.22:0,66,1037	1/1:0,21:21:51.17:713,51,0	0/0:16,0:16:48.16:0,48,767	0/0:26,0:26:75.26:0,75,1199	0/0:20,0:20:60.18:0,60,926	0/0:24,0:24:72.25:0,72,1143	0/0:28,0:28:81.26:0,81,1265	0/0:37,0:37:99:0,111,1689	0/0:23,0:23:69.22:0,69,1080	0/0:26,0:26:78.21:0,78,1218	0/0:30,0:30:90.31:0,90,1439	0/0:6,0:6:18.06:0,18,287
chr10	8301038	.	AT	A	13184.39	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=11.478;DP=724;FS=3.358;HRun=8;HaplotypeScore=70.4739;InbreedingCoeff=0.9627;MQ=73.65;MQ0=0;MQRankSum=-3.752;QD=24.28;ReadPosRankSum=2.233;VQSLOD=5.8163;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,30:30:75.12:724,75,0	1/1:1,8:9:21.03:203,21,0	0/0:16,0:16:38.67:0,39,410	0/0:14,0:13:1.83:0,2,244	1/1:4,34:38:96.15:927,96,0	1/1:3,26:29:72.11:695,72,0	1/1:0,25:25:54.09:522,54,0	1/1:2,21:23:63.10:608,63,0	1/1:1,24:25:66.11:637,66,0	0/0:25,1:26:46.07:0,46,809	0/0:23,1:24:37.21:0,37,722	1/1:5,25:30:75.11:724,75,0	1/1:1,27:28:69.11:666,69,0	1/1:2,29:31:81.13:782,81,0	0/0:23,0:23:69.21:0,69,834	1/1:2,27:29:69.10:666,69,0	1/1:3,30:33:78.11:753,78,0	1/1:1,20:21:54.09:521,54,0	1/1:1,17:18:51.07:486,51,0	1/1:3,44:47:99:1246,129,0	1/1:0,22:22:57.09:550,57,0	0/0:29,0:29:84.26:0,84,1014	0/0:24,0:24:63.18:0,63,741	0/0:25,0:25:63.19:0,63,761	1/1:3,36:39:93.14:898,93,0	1/1:1,26:27:44.85:704,45,0	1/1:4,26:29:71.87:695,72,0	1/1:3,6:9:18.03:174,18,0
chr10	8305784	.	AAATATG	A	18714.64	PASS	AB=0.571;AC=33;AF=0.589;AN=56;BaseQRankSum=15.399;DP=607;FS=1.776;HRun=0;HaplotypeScore=144.0120;InbreedingCoeff=0.9015;MQ=76.62;MQ0=0;MQRankSum=-18.334;QD=54.88;ReadPosRankSum=2.370;VQSLOD=5.2370;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,28:35:60.21:1332,60,0	1/1:1,9:10:24.08:549,24,0	0/0:27,0:27:74.47:0,74,2394	0/0:28,0:28:75.26:0,75,2508	0/0:29,0:29:72.22:0,72,2402	1/1:6,20:26:69.20:1574,69,0	1/1:3,17:20:51.17:1165,51,0	1/1:1,20:21:63.22:1458,63,0	1/1:2,22:24:72.25:1629,72,0	0/0:23,0:23:66.23:0,66,2190	0/0:18,0:18:51.65:0,52,1818	1/1:0,24:24:60.20:1358,60,0	1/1:2,27:29:63.22:1473,63,0	1/1:5,19:24:60.12:1268,60,0	0/0:29,0:29:87.30:0,87,3061	0/0:36,0:36:99:0,108,3727	1/1:2,15:17:42.14:974,42,0	0/0:15,0:15:42.14:0,42,1486	1/1:1,10:11:33.11:756,33,0	1/1:2,16:18:54.10:1107,54,0	1/1:3,9:12:26.27:439,26,0	0/0:17,0:17:48.13:0,48,1597	0/0:17,0:17:51.18:0,51,1816	0/0:27,0:27:75.26:0,75,2673	1/1:5,12:17:39.09:867,39,0	0/1:5,15:19:55.86:1042,0,56	1/1:3,29:32:72.20:1650,72,0	1/1:0,1:1:3.01:71,3,0
chr10	8305869	.	TA	T	9582.25	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=14.100;DP=681;FS=6.929;HRun=9;HaplotypeScore=84.9919;InbreedingCoeff=0.9744;MQ=73.16;MQ0=0;MQRankSum=-2.748;QD=23.31;ReadPosRankSum=1.674;VQSLOD=5.5748;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,44:45:99:1153,126,0	1/1:0,13:13:33.01:302,33,0	0/0:17,0:17:42.11:0,42,458	0/0:10,0:10:7.87:0,8,194	0/0:35,0:35:90.23:0,90,1015	1/1:2,27:29:75.03:686,75,0	1/1:1,29:30:78.03:714,78,0	1/1:5,27:32:78.02:709,78,0	1/1:2,18:20:51.01:467,51,0	0/0:24,0:24:63.19:0,63,727	0/0:19,0:19:45.13:0,45,513	1/1:4,19:23:63.01:571,63,0	1/1:7,19:26:66.03:602,66,0	1/1:3,27:30:72.03:659,72,0	0/0:33,0:33:93.27:0,93,1066	0/0:35,1:36:62.80:0,63,977	1/1:0,21:21:57.03:522,57,0	0/0:15,0:15:39.07:0,39,435	1/1:3,16:19:48.02:439,48,0	1/1:1,26:27:78.04:714,78,0	1/1:0,15:15:42.02:384,42,0	0/0:25,0:25:60.18:0,60,692	0/0:23,0:23:63.19:0,63,727	0/0:33,0:33:96.25:0,96,1086	1/1:4,18:22:51.02:467,51,0	1/1:5,24:28:40.39:618,40,0	1/1:9,19:28:57.02:521,57,0	1/1:0,2:2:6:55,6,0
chr10	8306063	.	GGT	G	475.65	PASS	AB=0.833;AC=27;AF=0.675;AN=40;BaseQRankSum=2.855;DP=549;FS=0.000;HRun=0;HaplotypeScore=89.6650;InbreedingCoeff=0.4300;MQ=65.75;MQ0=11;MQRankSum=-0.826;QD=1.53;ReadPosRankSum=1.621;VQSLOD=1.5892;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:22,1:21:3.01:31,3,0	1/1:10,0:10:3.01:31,3,0	./.	./.	./.	1/1:21,0:21:6:54,6,0	1/1:20,2:26:11.70:90,12,0	./.	0/0:13,0:14:15.04:0,15,197	0/0:10,0:10:0.47:0,0,1	0/0:18,0:17:15.04:0,15,188	1/1:22,1:24:8.59:57,9,0	./.	1/1:12,2:14:3:31,3,0	0/1:28,7:35:73.36:73,0,134	1/1:23,0:32:14.20:70,14,0	1/1:26,2:29:5.84:45,6,0	1/1:6,0:11:5.68:28,6,0	1/1:20,0:20:3:26,3,0	./.	1/1:36,0:35:1.87:5,2,0	0/0:12,0:12:6:0,6,66	0/0:14,0:13:0:0,0,0	0/0:28,0:28:9.01:0,9,106	./.	./.	1/1:22,3:24:3.01:31,3,0	1/1:4,1:5:3.01:31,3,0
chr10	8307410	.	C	CTGTGTGTGTGTGTGTG	2718.76	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=5.245;DP=379;FS=3.297;HRun=0;HaplotypeScore=155.5563;InbreedingCoeff=0.1004;MQ=60.39;MQ0=9;MQRankSum=-3.058;QD=10.30;ReadPosRankSum=-2.210;VQSLOD=2.4428;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:15:7.16:83,7,0	1/1:2,2:7:3:226,3,0	0/0:25,0:17:47.21:0,47,658	0/0:23,0:14:30.05:0,30,653	1/1:19,0:19:12.44:95,12,0	1/1:6,0:21:4.90:414,5,0	1/1:13,0:12:9.64:95,10,0	0/1:16,0:16:99:202,0,404	0/1:10,0:10:79.05:88,0,79	0/1:16,0:13:99:297,0,230	0/0:10,0:10:17.79:0,18,160	0/0:10,0:10:12.01:0,12,134	0/1:16,0:15:70.13:70,0,193	0/0:9,0:8:21:0,21,223	0/0:15,0:14:33.51:0,34,401	1/1:16,0:13:11.93:92,12,0	1/1:10,0:10:20.70:139,21,0	1/1:5,0:5:8.74:355,9,0	0/1:9,0:8:42.70:43,0,122	0/1:15,0:15:76.13:76,0,235	0/1:18,0:16:15.11:15,0,291	0/1:6,0:6:19.39:57,0,19	0/0:13,0:12:14.95:0,15,165	0/1:9,0:9:62.43:92,0,62	1/1:21,0:21:20.89:175,21,0	0/1:7,0:7:99:256,0,115	0/1:12,0:11:35.83:36,0,245	0/0:10,0:10:1.23:0,1,166
chr10	8307412	.	C	CTGTGTGTGTGTG	5826.25	PASS	AB=1.000;AC=40;AF=0.870;AN=46;BaseQRankSum=-0.234;DP=474;FS=0.000;HRun=0;HaplotypeScore=178.9459;InbreedingCoeff=0.2887;MQ=54.58;MQ0=9;MQRankSum=0.018;QD=16.23;ReadPosRankSum=-0.198;VQSLOD=3.8221;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:31,0:29:6.11:90,6,0	1/1:7,0:7:6:181,6,0	0/0:29,0:18:3.01:0,3,62	0/0:25,0:15:9.02:0,9,159	1/1:26,0:26:5.25:41,5,0	1/1:22,0:18:7.40:311,7,0	0/1:21,0:19:9.13:63,0,9	1/1:24,0:24:39.74:1182,40,0	1/1:14,0:14:15.05:412,15,0	1/1:17,0:14:15.05:633,15,0	./.	./.	1/1:18,0:17:11.05:237,11,0	./.	1/1:20,0:19:6.15:195,6,0	./.	0/1:11,0:11:0:0,0,0	1/1:6,0:6:9.03:392,9,0	1/1:15,0:14:15.28:300,15,0	1/1:17,4:21:2.37:174,2,0	1/1:19,0:17:3.01:89,3,0	1/1:7,0:8:2.80:116,3,0	1/1:14,0:13:3:25,3,0	1/1:12,2:14:3.39:175,3,0	1/1:23,0:22:3:25,3,0	1/1:10,0:10:21.07:831,21,0	1/1:18,0:17:9.03:356,9,0	./.
chr10	8309986	.	AGTTT	A	6332.42	PASS	AC=12;AF=0.222;AN=54;BaseQRankSum=15.649;DP=650;FS=2.176;HRun=0;HaplotypeScore=101.7875;InbreedingCoeff=0.9641;MQ=58.43;MQ0=10;MQRankSum=-2.065;QD=49.47;ReadPosRankSum=2.403;VQSLOD=5.8731;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,99,2539	0/0:16,0:16:42.14:0,42,1085	./.	0/0:14,0:2:3.01:0,3,62	0/0:31,0:31:84.23:0,84,2062	0/0:24,0:24:69.24:0,69,1733	0/0:22,0:22:66.22:0,66,1625	0/0:25,0:23:57.20:0,57,1439	0/0:21,0:21:63.22:0,63,1630	1/1:0,25:25:75.26:1338,75,0	1/1:1,22:23:60.21:1078,60,0	0/0:27,0:27:75.26:0,75,1918	0/0:34,0:34:93.32:0,93,2417	0/0:26,0:26:72.24:0,72,1801	1/1:0,30:30:87.30:1553,87,0	0/0:22,0:22:63.22:0,63,1585	0/0:25,0:25:63.19:0,63,1581	0/0:13,0:13:39.13:0,39,1013	0/0:29,0:28:69.24:0,69,1760	0/0:26,0:26:66.23:0,66,1677	0/0:26,0:26:63.22:0,63,1637	1/1:3,21:24:63.22:1126,63,0	1/1:0,13:13:39.13:697,39,0	1/1:2,11:13:30.57:540,31,0	0/0:21,0:21:60.21:0,60,1548	0/0:25,1:26:21.42:0,21,1776	0/0:29,0:28:78.23:0,78,1942	0/0:16,0:16:42.14:0,42,1091
chr10	8310539	.	G	GAGAA	9054.80	PASS	AB=0.835;AC=45;AF=0.804;AN=56;BaseQRankSum=-6.469;DP=646;FS=13.152;HRun=0;HaplotypeScore=127.9979;InbreedingCoeff=0.1141;MQ=61.45;MQ0=19;MQRankSum=-0.050;QD=14.70;ReadPosRankSum=0.910;VQSLOD=3.9962;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:5,0:16:15.89:65,0,16	1/1:14,0:14:3.41:214,3,0	0/0:14,0:12:5.45:0,5,220	0/0:16,0:10:23.61:0,24,226	1/1:30,0:32:45.05:599,45,0	1/1:21,0:21:18.43:272,18,0	1/1:21,0:18:32.86:294,33,0	1/1:42,0:42:99:1036,114,0	0/1:20,0:20:59.66:298,0,60	1/1:28,0:26:25.93:506,26,0	1/1:36,0:36:75.47:633,75,0	0/1:24,0:24:28.30:168,0,28	1/1:26,0:25:9.76:333,10,0	0/1:16,0:15:58.19:152,0,58	1/1:29,0:27:45.75:358,46,0	0/1:10,15:27:25.07:97,0,25	1/1:32,0:32:46.47:641,46,0	0/1:5,1:8:15.09:65,0,15	1/1:21,0:20:34.40:394,34,0	1/1:18,0:17:35.04:334,35,0	1/1:8,0:6:8.91:70,9,0	1/1:33,0:32:70.31:578,70,0	1/1:19,0:16:7.40:199,7,0	1/1:23,0:23:21.82:299,22,0	1/1:26,0:25:55.22:463,55,0	1/1:29,0:29:60.46:543,60,0	0/1:34,0:31:43.09:418,0,43	1/1:7,0:5:2.03:26,2,0
chr10	8311281	.	TCCAGGGTG	T	25749.85	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=19.335;DP=612;FS=2.151;HRun=0;HaplotypeScore=175.5875;InbreedingCoeff=0.9942;MQ=73.53;MQ0=0;MQRankSum=-19.700;QD=75.96;ReadPosRankSum=1.521;VQSLOD=5.2135;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,144,6196	0/0:10,0:10:30.10:0,30,1359	0/0:17,0:17:48.14:0,48,1751	0/0:16,0:16:42.14:0,42,1642	0/0:34,0:34:99:0,102,4515	0/0:24,0:24:72.25:0,72,3084	0/0:19,0:19:57.20:0,57,2479	1/1:3,22:25:66.23:1895,66,0	1/1:1,13:14:39.13:1141,39,0	1/1:0,17:18:54.15:1476,54,0	1/1:1,23:24:60.21:1749,60,0	1/1:4,24:28:63.22:1844,63,0	1/1:0,25:25:69.24:2020,69,0	1/1:1,22:23:63.22:1844,63,0	1/1:3,24:27:60.21:1756,60,0	0/0:23,0:23:69.24:0,69,2945	0/0:36,0:36:99:0,105,4233	0/0:16,0:16:48.15:0,48,1962	1/1:3,13:16:39.13:1063,39,0	1/1:0,25:25:69.24:2020,69,0	1/1:0,10:10:27.09:779,27,0	1/1:0,14:14:39.13:1141,39,0	1/1:1,12:13:32.96:963,33,0	1/1:0,8:8:18.06:527,18,0	0/0:30,0:30:90.31:0,90,3840	1/1:2,21:23:63.22:1845,63,0	1/1:1,41:42:99:3336,114,0	1/1:0,4:4:12.04:351,12,0
chr10	8313310	.	ATATATATG	A	164.49	PASS	AB=0.917;AC=6;AF=0.143;AN=42;BaseQRankSum=-0.448;DP=184;FS=9.772;HRun=0;HaplotypeScore=59.1352;InbreedingCoeff=0.1196;MQ=76.16;MQ0=0;MQRankSum=-1.657;QD=4.11;ReadPosRankSum=-1.762;VQSLOD=-0.0688;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:11,0:11:15.36:15,0,100	./.	0/0:7,0:5:6.02:0,6,67	0/0:14,0:8:8.43:0,8,65	0/0:8,0:8:5.98:0,6,47	0/0:6,0:6:0.93:0,1,1	./.	0/0:28,0:28:45.34:0,45,578	./.	0/1:4,4:8:44.31:163,0,44	1/1:4,0:4:3.01:46,3,0	0/0:3,0:3:8.89:0,9,91	0/0:9,0:9:21.05:0,21,416	0/0:5,0:5:6.02:0,6,142	./.	0/0:1,0:1:0.47:0,0,1	0/0:8,0:8:12.35:0,12,272	0/1:14,0:14:3.17:3,0,148	0/0:7,0:7:17.69:0,18,148	0/0:6,0:6:11.90:0,12,129	0/0:3,0:3:8.97:0,9,81	./.	0/1:3,0:3:14.89:41,0,15	./.	0/0:5,0:5:7.88:0,8,75	./.	0/0:13,0:13:24.07:0,24,396	0/0:5,0:5:5.91:0,6,54
chr10	8313314	.	ATATG	A	878.63	PASS	AB=0.958;AC=17;AF=0.405;AN=42;BaseQRankSum=-0.835;DP=164;FS=11.246;HRun=0;HaplotypeScore=44.2199;InbreedingCoeff=0.5052;MQ=72.57;MQ0=0;MQRankSum=-2.140;QD=14.40;ReadPosRankSum=0.369;VQSLOD=1.5885;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,0:8:20.77:178,21,0	./.	0/0:5,0:3:5.97:0,6,51	0/0:16,0:8:8.17:0,8,66	1/1:6,0:6:5.99:50,6,0	1/1:5,0:5:6:71,6,0	./.	0/0:27,0:27:17.23:0,17,553	./.	0/1:6,1:7:7.76:103,0,8	1/1:1,3:4:2.98:22,3,0	0/0:3,0:3:8.99:0,9,74	0/0:7,0:7:21.02:0,21,270	0/0:5,0:5:6.02:0,6,102	./.	1/1:1,0:1:3.01:48,3,0	0/1:8,0:9:81.59:86,0,82	1/1:14,0:14:40.82:360,41,0	0/0:7,0:7:18:0,18,184	0/0:5,0:5:12.01:0,12,147	0/0:3,0:3:8.95:0,9,67	./.	0/1:2,0:2:15.01:16,0,15	./.	1/1:5,0:5:11.98:99,12,0	./.	0/0:12,0:12:24:0,24,275	0/0:3,0:3:5.74:0,6,43
chr10	8313318	.	G	GTA	1402.95	PASS	AB=0.900;AC=17;AF=0.500;AN=34;BaseQRankSum=-5.154;DP=147;FS=0.000;HRun=0;HaplotypeScore=37.3956;InbreedingCoeff=0.5344;MQ=64.44;MQ0=0;MQRankSum=0.411;QD=18.96;ReadPosRankSum=-1.016;VQSLOD=2.7591;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:7:13.97:0,14,93	./.	./.	0/0:14,0:6:8.92:0,9,86	0/0:4,0:4:5.95:0,6,41	0/0:5,0:5:0.47:0,0,1	./.	1/1:10,19:29:71.18:886,71,0	./.	0/0:6,0:6:2.69:0,3,8	./.	1/1:4,0:4:6.02:78,6,0	1/1:4,2:6:9.03:142,9,0	1/1:1,4:5:3.01:51,3,0	./.	0/0:1,0:1:0.47:0,0,1	0/1:8,1:9:29.97:31,0,30	0/0:13,0:13:18.84:0,19,138	1/1:6,0:6:9.03:140,9,0	1/1:4,0:4:3.01:47,3,0	./.	./.	./.	./.	0/0:5,0:5:8.93:0,9,62	./.	1/1:8,0:8:6.02:75,6,0	1/1:3,0:3:6.02:83,6,0
chr10	8313350	.	ATG	A	1261.97	PASS	AB=1.000;AC=41;AF=0.820;AN=50;BaseQRankSum=-4.329;DP=117;FS=6.378;HRun=0;HaplotypeScore=29.2784;InbreedingCoeff=0.2104;MQ=77.40;MQ0=1;MQRankSum=-0.092;QD=14.85;ReadPosRankSum=-2.536;VQSLOD=1.2398;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,0:3:3:25,3,0	1/1:2,0:2:3:25,3,0	0/0:10,0:6:8.88:0,9,77	0/0:15,0:6:4.13:0,4,13	1/1:1,0:1:3:25,3,0	1/1:4,0:4:5.99:50,6,0	1/1:3,0:3:5.99:50,6,0	1/1:14,3:17:5.04:319,5,0	1/1:1,1:2:5.99:50,6,0	0/1:9,0:9:0.80:74,0,1	1/1:2,0:2:2.99:24,3,0	1/1:1,0:1:3:29,3,0	0/0:5,0:5:9.18:0,9,49	0/1:2,0:2:4.52:18,0,5	./.	./.	0/1:9,0:9:29.11:62,0,29	1/1:8,0:8:17.86:131,18,0	1/1:3,1:4:9:97,9,0	1/1:0,2:2:5.99:50,6,0	1/1:1,0:1:3:25,3,0	1/1:1,0:1:3:25,3,0	1/1:1,0:1:3:25,3,0	1/1:2,0:2:2.99:24,3,0	1/1:1,0:1:3:25,3,0	1/1:2,2:4:12:104,12,0	1/1:4,2:5:17.86:133,18,0	./.
chr10	8313404	.	A	AT	2428.35	PASS	AB=0.591;AC=21;AF=0.375;AN=56;BaseQRankSum=-8.778;DP=280;FS=17.976;HRun=11;HaplotypeScore=41.9544;InbreedingCoeff=0.8330;MQ=84.97;MQ0=0;MQRankSum=-0.693;QD=20.93;ReadPosRankSum=-1.145;VQSLOD=2.3666;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:0,0:17:32.59:0,33,94	0/0:0,0:4:8.15:0,8,24	0/0:9,0:10:6.73:0,7,89	0/0:13,0:13:17.76:0,18,127	0/0:3,0:9:12.21:0,12,35	0/0:1,0:7:12.22:0,12,35	0/0:2,0:12:18.33:0,18,53	1/1:5,16:21:46.31:451,46,0	1/1:2,11:13:33.07:335,33,0	0/0:14,0:14:26.87:0,27,209	0/0:5,0:6:13.97:0,14,99	1/1:0,6:6:15.03:152,15,0	1/1:1,6:7:15.03:152,15,0	1/1:0,8:8:21.04:213,21,0	0/0:16,0:16:41.81:0,42,325	0/0:0,0:4:8.15:0,8,24	0/0:1,0:8:14.26:0,14,41	0/0:1,0:8:12.21:0,12,35	0/1:4,9:13:33.68:225,0,34	1/1:0,5:5:15.03:152,15,0	1/1:5,14:20:18.68:357,19,0	0/0:4,0:4:8.94:0,9,67	0/0:12,0:12:35.86:0,36,279	0/0:11,0:11:26.88:0,27,209	0/0:1,0:9:14.26:0,14,41	1/1:0,15:15:39.07:390,39,0	1/1:0,6:5:15.03:152,15,0	1/1:0,2:2:6.01:61,6,0
chr10	8313595	.	CGCCTTCCACT	C	5370.27	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=11.208;DP=541;FS=4.012;HRun=0;HaplotypeScore=164.6927;InbreedingCoeff=0.9565;MQ=89.12;MQ0=0;MQRankSum=-11.641;QD=66.30;ReadPosRankSum=2.035;VQSLOD=4.4110;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:96.33:0,96,4737	0/0:6,0:6:12:0,12,490	0/0:18,0:18:51.16:0,51,1908	0/0:26,0:26:62.38:0,62,2563	0/0:8,0:8:24.07:0,24,1024	0/0:19,0:19:48.16:0,48,2461	0/0:25,0:25:66.21:0,66,3239	0/0:15,0:15:36.11:0,36,1401	0/0:20,0:20:57.20:0,57,2932	1/1:1,16:17:45.14:1373,45,0	1/1:1,10:11:18.06:578,18,0	0/0:21,0:21:63.22:0,63,3157	0/0:21,0:21:60.21:0,60,2938	0/0:26,0:26:72.24:0,72,3581	1/1:0,23:23:57.20:1826,57,0	0/0:17,0:17:51.18:0,51,2631	0/0:39,0:39:99:0,114,5672	0/0:27,0:27:75.26:0,75,3735	0/0:21,0:21:54.17:0,54,2294	0/0:14,0:14:42.13:0,42,1951	0/0:49,0:49:99:0,129,6370	1/1:0,5:5:9.03:289,9,0	1/1:1,8:9:18.06:577,18,0	1/1:8,8:16:24.08:726,24,0	0/0:8,0:8:24.08:0,24,1241	0/0:14,0:14:42.14:0,42,1989	0/0:29,0:29:81.28:0,81,4048	0/0:2,0:2:6.02:0,6,312
chr10	8314271	.	CAG	C	7725.08	PASS	AB=0.545;AC=23;AF=0.442;AN=52;BaseQRankSum=-1.420;DP=505;FS=5.277;HRun=0;HaplotypeScore=73.1855;InbreedingCoeff=0.8456;MQ=85.65;MQ0=0;MQRankSum=-1.069;QD=30.41;ReadPosRankSum=7.721;VQSLOD=6.1296;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:96.04:0,96,1120	0/0:7,0:7:9:0,9,91	0/0:18,0:18:40.95:0,41,582	0/0:21,0:20:33.29:0,33,372	0/0:16,0:17:41.95:0,42,553	0/0:18,0:18:44.92:0,45,422	0/0:21,0:21:60.06:0,60,777	1/1:0,20:22:50.72:643,51,0	1/1:0,24:24:51.17:809,51,0	./.	0/0:12,0:12:3.83:0,4,19	1/1:1,25:27:63.20:1009,63,0	1/1:0,24:26:72.24:1117,72,0	1/1:0,23:23:48.16:769,48,0	0/0:12,0:12:6.88:0,7,112	0/0:17,0:17:45.08:0,45,571	0/0:24,0:24:63.14:0,63,917	0/0:14,0:14:33.04:0,33,429	1/1:6,3:11:31.73:336,32,0	0/1:2,10:12:12.05:212,0,12	1/1:0,33:34:75.21:1175,75,0	1/1:13,0:13:3:27,3,0	0/0:11,0:11:17.56:0,18,109	1/1:5,0:18:8.80:65,9,0	0/0:14,0:14:30.07:0,30,449	1/1:0,27:28:69.04:1038,69,0	1/1:0,16:16:33.11:523,33,0	./.
chr10	8316570	.	T	TC	7773.90	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-10.773;DP=577;FS=4.519;HRun=0;HaplotypeScore=68.5384;InbreedingCoeff=0.9973;MQ=82.01;MQ0=0;MQRankSum=-4.518;QD=44.17;ReadPosRankSum=2.286;VQSLOD=5.4180;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:0,13:13:33.11:526,33,0	1/1:1,10:11:33.09:502,33,0	0/0:16,0:16:48.13:0,48,618	0/0:17,0:17:48.13:0,48,640	1/1:1,30:31:87.28:1364,87,0	1/1:2,16:18:54.13:831,54,0	1/1:0,13:13:36.12:575,36,0	0/0:32,0:32:87.27:0,87,1185	0/0:23,0:23:69.23:0,69,946	0/0:29,0:29:81.26:0,81,1119	0/0:29,0:29:87.29:0,87,1216	0/0:18,0:18:54.17:0,54,739	0/0:24,0:24:72.23:0,72,982	0/0:22,0:22:66.22:0,66,923	0/0:26,0:26:78.26:0,78,1089	1/1:2,25:27:81.25:1256,81,0	1/1:1,23:24:63.21:1005,63,0	1/1:0,20:20:57.19:901,57,0	0/0:16,0:16:45.15:0,45,628	0/0:31,0:31:93.31:0,93,1298	0/0:9,0:9:27.09:0,27,376	0/0:18,0:18:54.18:0,54,755	0/0:22,0:22:66.21:0,66,905	0/0:15,0:15:45.15:0,45,628	1/1:1,18:18:51.17:814,51,0	0/0:19,0:19:57.17:0,57,777	0/0:30,0:30:90.30:0,90,1250	0/0:5,0:5:15.05:0,15,203
chr10	8316638	.	G	GA	5610.68	PASS	AB=0.801;AC=39;AF=0.696;AN=56;BaseQRankSum=4.146;DP=500;FS=48.799;HRun=9;HaplotypeScore=113.6508;InbreedingCoeff=0.7319;MQ=82.49;MQ0=4;MQRankSum=-7.045;QD=15.00;ReadPosRankSum=-1.628;VQSLOD=1.1848;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:12,0:24:46.83:242,47,0	1/1:6,0:9:14.35:79,14,0	0/0:39,1:31:24.26:0,24,247	0/1:28,0:19:8.72:9,0,95	1/1:14,1:28:48.79:280,49,0	1/1:10,0:16:30.97:159,31,0	1/1:5,0:10:25.88:145,26,0	0/1:13,12:26:18.85:434,0,19	1/1:5,11:16:39.09:417,39,0	0/0:17,0:17:38.98:0,39,338	0/0:18,0:18:32.97:0,33,286	1/1:9,12:21:39.08:414,39,0	1/1:9,6:15:27.05:283,27,0	1/1:9,11:20:45.08:472,45,0	0/0:13,0:14:35.02:0,35,292	1/1:12,0:19:4.22:123,4,0	1/1:10,0:14:20.26:117,20,0	1/1:8,0:15:26.26:136,26,0	1/1:6,11:17:39.10:422,39,0	1/1:10,9:19:36.04:369,36,0	1/1:4,7:11:30.94:315,31,0	0/0:13,0:13:29.99:0,30,260	0/0:14,0:14:35.99:0,36,313	0/0:9,0:9:17.98:0,18,156	1/1:7,1:17:33.85:207,34,0	1/1:8,11:19:19.06:424,19,0	1/1:8,15:23:28.09:538,28,0	0/1:3,1:4:19.15:24,0,19
chr10	8316659	.	C	CA	4492.17	PASS	AB=0.837;AC=41;AF=0.732;AN=56;BaseQRankSum=4.005;DP=503;FS=12.610;HRun=12;HaplotypeScore=106.5053;InbreedingCoeff=0.6206;MQ=80.75;MQ0=5;MQRankSum=-3.953;QD=10.12;ReadPosRankSum=-0.419;VQSLOD=2.5427;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:19,1:20:32.21:206,32,0	1/1:8,0:8:17.22:88,17,0	0/1:55,0:36:14.87:15,0,124	0/1:32,0:20:4.76:5,0,74	1/1:26,0:27:31.54:240,32,0	1/1:15,0:14:34.76:193,35,0	1/1:9,1:10:26.61:196,27,0	1/1:12,23:36:28.17:577,28,0	1/1:2,9:11:21.02:199,21,0	0/0:15,0:17:30.88:0,31,209	0/1:11,1:13:4.23:4,0,118	1/1:6,13:19:24.03:231,24,0	0/1:5,10:15:0.41:135,0,0	1/1:3,12:15:25.59:238,26,0	0/0:12,0:12:29.82:0,30,219	1/1:15,0:15:32.21:180,32,0	1/1:13,0:13:31.44:163,31,0	1/1:15,1:17:38.88:221,39,0	1/1:11,12:23:14.53:268,15,0	1/1:2,8:13:10.62:215,11,0	1/1:6,7:13:17.97:161,18,0	0/0:10,0:10:23.86:0,24,175	0/0:13,0:13:35.79:0,36,262	0/0:6,0:7:16.95:0,17,115	1/1:19,0:19:17.39:170,17,0	1/1:8,12:20:43.26:399,43,0	0/1:12,12:27:26.94:271,0,27	1/1:2,3:5:14.37:118,14,0
chr10	8316671	.	A	AAC	5321.46	PASS	AB=1.000;AC=22;AF=0.393;AN=56;BaseQRankSum=0.087;DP=491;FS=0.000;HRun=0;HaplotypeScore=103.7182;InbreedingCoeff=0.7143;MQ=83.25;MQ0=3;MQRankSum=-4.281;QD=24.30;ReadPosRankSum=-0.466;VQSLOD=5.0773;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,9:16:39.04:541,39,0	1/1:3,5:9:27.06:376,27,0	0/0:54,0:37:26.75:0,27,471	0/1:29,0:19:4.35:4,0,222	1/1:12,11:27:49.90:917,50,0	1/1:4,10:14:42.12:651,42,0	1/1:3,7:10:26.41:351,26,0	0/0:35,0:35:56.98:0,57,410	0/0:12,0:12:10.90:0,11,76	0/0:16,0:16:48.08:0,48,542	0/0:10,0:10:29.40:0,29,317	0/0:17,0:18:18.14:0,18,106	0/0:18,0:18:21.02:0,21,162	0/0:16,0:16:30.02:0,30,156	0/0:11,0:11:33.10:0,33,422	1/1:3,10:14:39.51:584,40,0	1/1:3,9:13:39.04:588,39,0	1/1:6,8:16:47.85:618,48,0	0/0:23,0:23:20.64:0,21,278	0/1:15,0:15:19.67:20,0,122	0/1:11,0:11:7.20:7,0,62	0/0:9,0:9:27.07:0,27,342	0/0:16,0:16:42.11:0,42,524	0/0:8,0:8:24.03:0,24,271	1/1:7,8:17:43.17:631,43,0	0/0:20,0:20:18.93:0,19,142	0/1:26,0:26:32.13:32,0,217	0/0:6,0:6:9.15:0,9,40
chr10	8319149	.	G	GACT	13545.95	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-15.092;DP=755;FS=15.882;HRun=0;HaplotypeScore=104.5649;InbreedingCoeff=0.9930;MQ=87.87;MQ0=0;MQRankSum=-8.479;QD=55.29;ReadPosRankSum=3.790;VQSLOD=6.1741;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,36:39:90.31:2213,90,0	1/1:0,13:14:36.12:885,36,0	0/0:31,0:31:45.20:0,45,1418	0/0:24,0:24:69.17:0,69,1143	1/1:0,35:36:87.30:2138,87,0	1/1:1,26:27:54.19:1329,54,0	1/1:1,21:23:54.19:1328,54,0	0/0:27,0:27:81.27:0,81,1477	0/0:21,0:21:63.20:0,63,1143	0/0:26,0:26:78.26:0,78,1409	0/0:23,0:23:66.22:0,66,1205	0/0:35,0:35:99:0,105,1928	0/0:30,0:30:90.26:0,90,1584	0/0:29,0:29:87.25:0,87,1526	0/0:31,0:31:90.31:0,90,1665	1/1:2,28:33:10.31:1495,10,0	1/1:1,21:24:54.19:1329,54,0	1/1:3,17:21:48.14:1130,48,0	0/0:17,0:17:51.16:0,51,908	0/0:40,0:40:99:0,117,2173	0/0:32,0:32:96.33:0,96,1783	0/0:19,0:19:56.56:0,57,1003	0/0:25,0:25:75.26:0,75,1394	0/0:21,0:21:63.19:0,63,1112	1/1:1,27:28:69.24:1698,69,0	0/0:32,0:32:96.32:0,96,1755	0/0:33,0:32:99:0,99,1837	0/0:14,0:14:39.13:0,39,726
chr10	8319781	.	GA	G	5305.61	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=19.655;DP=717;FS=7.991;HRun=4;HaplotypeScore=175.8115;InbreedingCoeff=0.9931;MQ=79.02;MQ0=0;MQRankSum=-18.149;QD=19.80;ReadPosRankSum=-0.887;VQSLOD=2.9150;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,102,1426	0/0:13,0:13:39.13:0,39,546	0/0:19,0:19:54.15:0,54,719	0/0:24,0:24:48.13:0,48,783	0/0:35,0:35:99:0,99,1385	0/0:33,0:33:96.32:0,96,1344	0/0:31,0:31:90.25:0,90,1193	1/1:10,18:28:53.99:479,54,0	1/1:3,21:24:59.63:466,60,0	0/0:27,0:27:81.27:0,81,1135	0/0:21,0:21:60.18:0,60,807	1/1:6,19:25:62.44:497,62,0	1/1:10,21:31:74.13:575,74,0	1/1:5,24:29:74.88:630,75,0	0/0:41,0:41:99:0,111,1521	0/0:32,0:32:87.29:0,87,1219	0/0:27,0:27:78.26:0,78,1092	0/0:15,0:15:45.15:0,45,630	1/1:3,10:13:32.99:288,33,0	1/1:8,21:29:74.53:604,75,0	1/1:9,11:20:38.95:336,39,0	0/0:19,0:19:57.18:0,57,782	0/0:20,0:20:60.19:0,60,823	0/0:39,0:39:99:0,117,1638	0/0:16,0:16:42.14:0,42,588	1/1:6,31:37:14.93:727,15,0	1/1:5,23:26:74.16:605,74,0	1/1:0,4:4:11.98:100,12,0
chr10	8319787	.	TA	T	2833.88	PASS	AB=0.525;AC=21;AF=0.375;AN=56;BaseQRankSum=20.555;DP=660;FS=8.856;HRun=1;HaplotypeScore=179.2024;InbreedingCoeff=0.9444;MQ=81.41;MQ0=0;MQRankSum=-19.145;QD=13.49;ReadPosRankSum=1.493;VQSLOD=2.4456;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,105,1644	0/0:13,0:13:39.13:0,39,619	0/0:20,0:20:60.18:0,60,914	0/0:23,0:23:59.25:0,59,946	0/0:32,0:32:96.33:0,96,1529	0/0:31,0:31:93.32:0,93,1481	0/0:30,0:30:90.29:0,90,1415	1/1:0,17:17:49.96:300,50,0	1/1:0,21:21:57.85:286,58,0	0/0:31,0:31:90.30:0,90,1413	0/0:20,0:20:60.19:0,60,935	1/1:1,19:20:57.10:287,57,0	1/1:3,21:24:67.17:327,67,0	1/1:0,24:24:68.52:346,69,0	0/0:40,0:40:99:0,120,1845	0/0:31,0:31:93.32:0,93,1487	0/0:29,0:29:84.26:0,84,1299	0/0:16,0:16:45.15:0,45,711	1/1:0,10:10:29.51:185,30,0	1/1:1,21:22:62.69:313,63,0	1/1:0,11:11:31.35:158,31,0	0/0:19,0:19:57.19:0,57,911	0/0:22,0:22:66.21:0,66,1032	0/0:41,0:41:99:0,123,1940	0/0:17,0:17:51.17:0,51,815	0/1:3,29:32:3.02:405,0,3	1/1:2,22:25:71.11:382,71,0	1/1:0,4:4:11.65:66,12,0
chr10	8319789	.	TAAAAC	T	8562.35	PASS	AB=0.517;AC=21;AF=0.375;AN=56;BaseQRankSum=20.425;DP=658;FS=6.212;HRun=0;HaplotypeScore=215.9550;InbreedingCoeff=0.9191;MQ=81.19;MQ0=0;MQRankSum=-19.867;QD=40.77;ReadPosRankSum=1.679;VQSLOD=4.1262;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,105,3245	0/0:12,0:12:33.11:0,33,1062	0/0:19,0:19:54.19:0,54,1715	0/0:23,0:23:69.23:0,69,1961	0/0:31,0:31:90.31:0,90,2804	0/0:29,0:29:87.30:0,87,2759	0/0:29,0:29:87.30:0,87,2787	1/1:0,17:17:51.17:744,51,0	1/1:0,21:21:63.20:865,63,0	0/0:32,0:32:93.31:0,93,2858	0/0:20,0:20:60.21:0,60,1902	1/1:1,19:20:60.20:828,60,0	1/1:2,20:23:69.12:928,69,0	1/1:1,24:25:75.23:1028,75,0	0/0:40,0:40:99:0,120,3778	0/0:32,0:32:96.33:0,96,3056	0/0:29,0:29:84.29:0,84,2618	0/0:17,0:17:48.16:0,48,1519	1/1:1,10:11:33.11:481,33,0	1/1:1,21:22:66.21:903,66,0	1/1:1,11:12:33.11:460,33,0	0/0:19,0:19:57.20:0,57,1811	0/0:22,0:22:66.23:0,66,2116	0/0:42,0:42:99:0,126,3914	0/0:17,0:17:51.18:0,51,1643	0/1:2,29:31:99:1161,0,101	1/1:2,22:24:72.11:992,72,0	1/1:0,4:4:12.04:172,12,0
chr10	8319793	.	A	AGT	1684.42	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=20.398;DP=666;FS=5.597;HRun=0;HaplotypeScore=204.8961;InbreedingCoeff=0.9192;MQ=80.30;MQ0=0;MQRankSum=-19.475;QD=7.76;ReadPosRankSum=1.165;VQSLOD=3.1146;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,102,1636	0/0:11,0:11:33.11:0,33,534	0/0:19,0:19:57.19:0,57,913	0/0:22,0:22:66.06:0,66,1027	0/0:30,0:30:87.28:0,87,1371	0/0:30,0:30:90.28:0,90,1416	0/0:30,0:30:87.30:0,87,1416	1/1:17,0:17:40.29:136,40,0	1/1:21,0:21:38.21:165,38,0	0/0:32,0:32:90.31:0,90,1455	0/0:21,0:21:63.19:0,63,988	1/1:20,0:20:41.58:186,42,0	1/1:21,0:21:46.04:158,46,0	1/1:24,1:25:54.91:229,55,0	0/0:40,0:40:99:0,117,1899	0/0:34,0:34:99:0,102,1653	0/0:29,0:29:79.29:0,79,1314	0/0:16,0:16:48.16:0,48,778	1/1:11,0:11:26.97:136,27,0	1/1:21,4:25:55.82:272,56,0	1/1:15,0:15:28.86:144,29,0	0/0:18,0:18:54.18:0,54,881	0/0:22,0:22:66.23:0,66,1068	0/0:42,0:42:99:0,120,1922	0/0:18,0:18:54.18:0,54,875	0/1:32,0:32:21.16:179,0,21	1/1:24,0:24:55.08:228,55,0	1/1:6,0:6:11.76:73,12,0
chr10	8320770	.	CT	C	3122.10	PASS	AB=0.996;AC=36;AF=0.643;AN=56;BaseQRankSum=0.085;DP=595;FS=22.680;HRun=9;HaplotypeScore=107.4377;InbreedingCoeff=0.1842;MQ=72.14;MQ0=15;MQRankSum=-1.866;QD=7.75;ReadPosRankSum=8.763;VQSLOD=-0.3437;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:6,11:17:35.93:316,36,0	1/1:2,7:9:27:242,27,0	0/0:80,2:32:36.46:0,36,283	0/0:75,0:28:23.56:0,24,198	1/1:7,12:19:34.54:300,35,0	1/1:3,16:19:51.01:460,51,0	1/1:4,13:17:45.02:411,45,0	0/1:29,0:29:2.99:3,0,199	0/1:8,0:8:7.92:8,0,15	0/1:20,0:20:0.47:0,0,53	1/1:26,0:26:4.98:55,5,0	0/1:19,0:19:19.50:20,0,53	1/1:17,0:17:2.61:73,3,0	0/0:13,0:13:5.36:0,5,108	0/1:19,0:19:15.82:16,0,33	1/1:4,5:8:18.01:165,18,0	1/1:7,14:20:44.92:396,45,0	1/1:2,10:12:32.92:285,33,0	0/0:14,0:14:1.62:0,2,68	0/1:25,1:26:40.60:41,0,79	0/0:5,0:5:0.88:0,1,11	1/1:14,0:14:14.75:43,15,0	0/1:21,0:21:17.40:17,0,28	0/1:12,0:12:11.35:22,0,11	1/1:7,11:18:41.99:376,42,0	0/1:19,0:19:7.89:8,0,82	1/1:20,0:20:0.30:31,0,0	0/1:12,0:12:5.91:6,0,23
chr10	8320779	.	TG	T	6221.90	PASS	AB=1.000;AC=47;AF=0.839;AN=56;BaseQRankSum=-6.455;DP=553;FS=5.894;HRun=8;HaplotypeScore=96.6556;InbreedingCoeff=0.1488;MQ=70.35;MQ0=13;MQRankSum=1.333;QD=13.02;ReadPosRankSum=7.328;VQSLOD=3.8579;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:14,0:14:2.05:33,0,2	0/1:11,0:11:27.04:27,0,32	0/0:72,0:30:17.55:0,18,185	0/1:63,0:22:1.78:2,0,111	0/1:18,0:18:40.81:41,0,60	0/1:20,0:20:33.57:62,0,34	0/1:17,0:17:26.98:31,0,27	1/1:10,14:24:38.87:363,39,0	1/1:2,6:8:18.03:173,18,0	1/1:4,12:16:39:365,39,0	1/1:3,22:25:71.87:652,72,0	1/1:7,12:19:42.05:397,42,0	1/1:1,16:17:39.06:374,39,0	1/1:2,13:15:11.83:115,12,0	1/1:4,13:17:36.05:345,36,0	1/1:7,0:6:4.21:16,4,0	1/1:18,0:17:4.55:48,5,0	0/1:12,0:12:2.91:31,0,3	1/1:3,13:16:38.97:348,39,0	1/1:4,23:27:30.41:532,30,0	1/1:1,4:5:6.01:58,6,0	1/1:1,16:17:44.80:391,45,0	1/1:2,17:19:42:394,42,0	1/1:1,9:10:24.04:231,24,0	1/1:14,0:14:22.38:85,22,0	1/1:10,12:22:58.53:525,59,0	1/1:1,19:20:48.08:463,48,0	1/1:1,4:6:14.06:122,14,0
chr10	8320787	.	GT	G	982.44	PASS	AB=0.972;AC=22;AF=0.393;AN=56;BaseQRankSum=-5.785;DP=526;FS=2.254;HRun=1;HaplotypeScore=109.8110;InbreedingCoeff=0.0619;MQ=71.63;MQ0=7;MQRankSum=4.374;QD=2.97;ReadPosRankSum=7.592;VQSLOD=-0.3056;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:29.66:0,30,142	0/0:12,0:12:31.78:0,32,225	0/1:47,3:21:19.60:20,0,175	0/0:47,1:19:16.48:0,16,223	0/0:17,1:18:29.03:0,29,242	0/0:25,0:25:61.35:0,61,431	0/0:18,0:18:43.03:0,43,335	0/1:21,0:21:22.69:23,0,80	0/1:7,1:8:7.70:45,0,8	1/1:14,0:14:8.27:43,8,0	1/1:23,1:24:48.31:187,48,0	0/1:17,1:18:26.61:95,0,27	1/1:18,0:18:1.36:65,1,0	0/1:14,0:14:10.62:11,0,15	1/1:14,2:16:3.52:91,4,0	0/0:9,0:8:22.94:0,23,169	0/0:18,0:17:40.74:0,41,241	0/0:12,0:12:31.76:0,32,186	0/1:16,0:16:8.01:29,0,8	0/1:32,0:32:72.70:73,0,88	0/0:6,0:6:1.32:0,1,39	0/1:20,0:20:45.72:69,0,46	1/1:18,0:18:5.90:68,6,0	0/1:10,0:10:3.55:40,0,4	0/0:16,0:16:36.15:0,36,213	0/1:19,3:22:16.94:171,0,17	0/1:23,0:23:23.42:114,0,23	0/1:6,0:6:6.36:11,0,6
chr10	8320816	.	A	AGAAG	10310.63	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-4.089;DP=477;FS=0.000;HRun=0;HaplotypeScore=100.6988;InbreedingCoeff=0.9978;MQ=80.11;MQ0=0;MQRankSum=-9.879;QD=64.85;ReadPosRankSum=-0.191;VQSLOD=6.5679;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,11:13:36.12:843,36,0	1/1:1,9:10:27.09:686,27,0	0/0:12,0:12:30.10:0,30,559	0/0:17,0:17:45.15:0,45,816	1/1:6,21:27:72.22:1741,72,0	1/1:6,22:28:84.29:2058,84,0	1/1:3,13:16:42.07:901,42,0	0/0:26,0:26:78.25:0,78,1447	0/0:11,0:11:30.10:0,30,567	0/0:14,0:14:39.13:0,39,736	0/0:22,0:22:66.21:0,66,1198	0/0:16,0:16:45.13:0,45,783	0/0:20,0:20:48.16:0,48,911	0/0:18,0:18:30.10:0,30,554	0/0:14,0:14:36.12:0,36,682	1/1:2,9:10:30.09:725,30,0	1/1:6,11:16:45.15:1091,45,0	1/1:6,8:14:39.10:911,39,0	0/0:11,0:11:33.10:0,33,568	0/0:29,0:29:87.28:0,87,1610	0/0:8,0:8:21.06:0,21,367	0/0:21,0:21:60.18:0,60,1074	0/0:20,0:20:57.20:0,57,1082	0/0:10,0:10:24.08:0,24,456	1/1:6,17:23:57.18:1354,57,0	0/0:23,0:23:69.22:0,69,1250	0/0:18,0:18:42:0,42,765	0/0:7,0:7:21.07:0,21,398
chr10	8320890	.	TC	T	5796.34	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=17.005;DP=537;FS=0.736;HRun=1;HaplotypeScore=66.8907;InbreedingCoeff=0.9948;MQ=70.88;MQ0=0;MQRankSum=-3.214;QD=33.31;ReadPosRankSum=3.061;VQSLOD=4.5883;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,12:12:33.04:389,33,0	1/1:0,9:9:27.03:316,27,0	0/0:17,0:17:51.17:0,51,815	0/0:11,0:11:30.07:0,30,451	1/1:0,25:25:66.21:818,66,0	1/1:0,24:24:66.21:817,66,0	1/1:0,13:13:30.09:372,30,0	0/0:35,0:35:99:0,105,1638	0/0:14,0:14:42.14:0,42,664	0/0:16,0:16:42.14:0,42,671	0/0:24,0:24:66.22:0,66,1047	0/0:20,0:20:60.20:0,60,959	0/0:14,0:14:42.14:0,42,653	0/0:18,0:18:54.17:0,54,821	0/0:17,0:17:51.17:0,51,815	1/1:0,25:25:69.22:854,69,0	1/1:0,15:15:39.12:483,39,0	1/1:0,23:23:66.21:818,66,0	0/0:32,0:32:93.30:0,93,1436	0/0:27,0:27:78.27:0,78,1247	0/0:13,0:13:39.12:0,39,593	0/0:20,0:20:60.20:0,60,957	0/0:19,0:19:57.19:0,57,909	0/0:24,0:24:72.23:0,72,1127	1/1:0,28:28:75.24:929,75,0	0/0:18,0:18:54.18:0,54,842	0/0:20,0:20:60.17:0,60,905	0/0:4,0:4:12.04:0,12,192
chr10	8324386	.	AAC	A	7543.02	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=17.991;DP=583;FS=16.779;HRun=0;HaplotypeScore=94.1251;InbreedingCoeff=0.9993;MQ=75.34;MQ0=0;MQRankSum=-3.136;QD=40.99;ReadPosRankSum=4.319;VQSLOD=5.5743;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,17:17:48.16:711,48,0	1/1:0,9:9:24.08:357,24,0	0/0:20,0:19:40.51:0,41,628	0/0:14,0:13:26.77:0,27,449	1/1:0,30:30:84.14:1193,84,0	1/1:0,21:21:57.19:851,57,0	1/1:0,10:10:27.09:402,27,0	0/0:39,0:39:99:0,117,2084	0/0:15,0:15:45.15:0,45,864	0/0:28,0:28:83.93:0,84,1482	0/0:23,0:23:69.07:0,69,1286	0/0:23,0:23:69.21:0,69,1263	0/0:21,0:21:63.19:0,63,1112	0/0:19,0:19:57.14:0,57,972	0/0:22,0:22:66.20:0,66,1191	1/1:0,27:27:78.26:1166,78,0	1/1:0,22:22:63.16:916,63,0	1/1:0,16:16:45.13:650,45,0	0/0:18,0:18:54.15:0,54,944	0/0:32,0:32:96.26:0,96,1679	0/0:13,0:13:34.40:0,34,656	0/0:18,0:18:54.16:0,54,954	0/0:17,0:17:51.03:0,51,877	0/0:13,0:13:39.10:0,39,685	1/1:0,32:32:87.29:1297,87,0	0/0:19,0:19:57.18:0,57,1067	0/0:30,0:30:90.30:0,90,1699	0/0:14,0:14:39.08:0,39,644
chr10	8326425	.	ATG	A	2607.57	PASS	AB=0.811;AC=27;AF=0.500;AN=54;BaseQRankSum=-1.879;DP=748;FS=7.111;HRun=0;HaplotypeScore=147.2537;InbreedingCoeff=0.5250;MQ=63.88;MQ0=6;MQRankSum=-0.785;QD=6.86;ReadPosRankSum=2.461;VQSLOD=2.6008;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:18,17:33:12.25:250,12,0	0/1:4,6:11:23.02:149,0,23	./.	0/0:37,0:29:0.47:0,0,1	1/1:15,8:22:18.05:200,18,0	1/1:12,16:29:32.75:328,33,0	1/1:8,11:20:23.90:248,24,0	0/0:34,0:34:18.93:0,19,216	0/1:12,0:21:6.32:6,0,103	1/1:10,0:31:32.01:176,32,0	1/1:7,0:16:2.18:13,2,0	0/0:13,0:31:2.73:0,3,93	0/0:12,0:31:24:0,24,210	0/0:20,0:27:29.03:0,29,270	1/1:11,0:37:31.14:153,31,0	1/1:17,15:33:35.89:381,36,0	1/1:11,10:23:38.73:383,39,0	0/1:11,6:16:32.10:112,0,32	0/0:23,0:22:12.88:0,13,121	0/0:14,0:28:4.79:0,5,31	0/0:24,0:50:10.73:0,11,194	1/1:12,0:23:3.50:35,4,0	0/1:12,0:16:13.36:30,0,13	0/1:13,0:13:5.99:6,0,27	1/1:13,16:30:32.06:327,32,0	0/0:18,0:32:38.51:0,39,259	0/0:14,0:30:19.82:0,20,159	0/0:11,0:15:16.56:0,17,142
chr10	8327907	.	AGT	A	19281.19	PASS	AB=0.969;AC=53;AF=0.946;AN=56;BaseQRankSum=-3.764;DP=795;FS=0.000;HRun=0;HaplotypeScore=109.0342;InbreedingCoeff=0.6711;MQ=72.52;MQ0=9;MQRankSum=-2.096;QD=25.99;ReadPosRankSum=6.198;VQSLOD=5.6827;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,30:34:39.39:950,39,0	1/1:1,11:12:33.10:406,33,0	0/0:53,0:39:29.97:0,30,941	0/1:29,1:25:12.01:12,0,174	1/1:2,30:30:84.26:1034,84,0	1/1:8,17:24:39.12:480,39,0	1/1:7,21:28:54.17:665,54,0	1/1:14,17:31:51.16:627,51,0	1/1:4,24:29:20.12:741,20,0	1/1:8,19:28:60.01:705,60,0	1/1:2,16:19:47.94:551,48,0	1/1:3,34:37:96.30:1182,96,0	1/1:3,40:43:99:1404,114,0	1/1:5,30:35:75.23:923,75,0	1/1:5,33:37:90.28:1108,90,0	1/1:6,25:31:66.21:812,66,0	1/1:3,22:25:51.16:628,51,0	1/1:3,15:18:36.11:443,36,0	1/1:7,10:17:30.09:369,30,0	1/1:5,27:32:72.19:870,72,0	1/1:2,11:13:30.09:369,30,0	1/1:1,16:17:45.14:554,45,0	1/1:8,17:24:45.14:554,45,0	1/1:2,38:40:99:1219,99,0	1/1:6,22:29:63.20:776,63,0	1/1:6,23:29:69.22:850,69,0	1/1:8,19:28:50.99:605,51,0	1/1:2,13:14:36.11:443,36,0
chr10	8328122	.	TTGTGTGTG	T	2010.75	PASS	AB=0.821;AC=17;AF=0.315;AN=54;BaseQRankSum=6.051;DP=763;FS=1.451;HRun=0;HaplotypeScore=174.6593;InbreedingCoeff=0.8046;MQ=61.23;MQ0=27;MQRankSum=-6.317;QD=8.86;ReadPosRankSum=0.378;VQSLOD=2.1052;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:26,8:34:2.78:13,3,0	1/1:3,10:13:12.04:270,12,0	./.	0/0:58,0:25:2.22:0,2,7	1/1:15,2:17:17.97:244,18,0	1/1:11,7:18:12.04:270,12,0	0/1:36,9:46:7.25:131,0,7	0/0:27,0:26:15.02:0,15,285	0/0:18,0:17:18.02:0,18,493	0/0:21,0:21:30.08:0,30,806	0/0:13,0:16:15.05:0,15,400	0/0:19,0:22:30.07:0,30,823	0/0:29,0:29:45.11:0,45,1556	0/0:25,0:26:39.13:0,39,1356	0/0:20,0:26:17.94:0,18,587	1/1:11,16:27:27.09:645,27,0	1/1:16,12:29:5.97:95,6,0	1/1:8,7:15:8.31:209,8,0	0/0:21,0:21:30.09:0,30,671	0/0:15,0:15:24.54:0,25,619	0/0:79,0:80:75.68:0,76,2181	0/0:21,0:25:26:0,26,689	0/0:15,0:22:14.83:0,15,431	0/0:18,0:29:15.05:0,15,453	1/1:18,8:26:15.01:320,15,0	0/0:19,0:20:27.79:0,28,922	0/0:17,0:16:24.04:0,24,648	0/0:6,0:5:9.03:0,9,369
chr10	8329649	.	AC	A	5706.23	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-5.590;DP=541;FS=1.082;HRun=7;HaplotypeScore=83.6261;InbreedingCoeff=0.9992;MQ=74.04;MQ0=0;MQRankSum=-0.347;QD=27.30;ReadPosRankSum=-0.753;VQSLOD=5.0140;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:28:59.91:0,60,313	0/0:0,0:13:34.09:0,34,174	0/0:11,0:11:24.04:0,24,268	0/0:10,0:10:24.06:0,24,277	0/0:1,0:19:45.58:0,46,236	0/0:0,0:18:48.36:0,48,246	0/0:2,0:16:34.09:0,34,174	1/1:2,22:24:66.13:662,66,0	1/1:1,11:12:33.01:324,33,0	0/0:16,0:16:42.12:0,42,516	0/0:23,0:23:63.19:0,63,774	1/1:1,17:18:51.12:520,51,0	1/1:1,17:18:51.11:519,51,0	1/1:1,18:19:51.12:520,51,0	0/0:18,0:18:45.13:0,45,553	0/0:0,0:24:68.18:0,68,348	0/0:1,0:22:56.41:0,56,283	0/0:4,0:34:82.55:0,83,421	1/1:2,11:13:33.07:337,33,0	1/1:1,29:30:87.13:867,87,0	1/1:1,11:11:30.06:306,30,0	0/0:21,0:21:57.18:0,57,717	0/0:24,0:24:72.21:0,72,881	0/0:17,0:17:51.16:0,51,641	0/0:1,0:18:45.45:0,45,232	1/1:3,21:24:63.13:643,63,0	1/1:4,18:22:51.11:520,51,0	1/1:0,17:17:48.11:490,48,0
chr10	8330753	.	CT	C	6345.29	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-2.775;DP=557;FS=3.958;HRun=11;HaplotypeScore=91.2522;InbreedingCoeff=0.7910;MQ=66.61;MQ0=5;MQRankSum=-0.475;QD=12.95;ReadPosRankSum=4.550;VQSLOD=5.0941;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,20:24:47.84:392,48,0	1/1:1,9:10:20.96:172,21,0	0/0:37,1:16:15.83:0,16,179	0/0:28,0:11:1.19:0,1,73	1/1:4,17:21:44.91:369,45,0	1/1:3,23:26:56.87:466,57,0	1/1:3,11:14:23.97:197,24,0	1/1:4,0:22:36.89:118,37,0	1/1:2,0:7:10.18:29,10,0	1/1:8,18:26:50.73:414,51,0	1/1:1,19:20:50.90:418,51,0	1/1:1,0:21:34.41:100,34,0	1/1:7,0:20:22.30:65,22,0	1/1:0,0:17:24.44:71,24,0	1/1:4,19:23:44.84:369,45,0	1/1:2,12:14:38.53:305,39,0	1/1:5,20:24:53.79:443,54,0	1/1:4,18:22:56.85:461,57,0	1/1:5,0:19:26.47:77,26,0	1/1:0,0:12:20.36:59,20,0	1/1:2,0:12:14.25:41,14,0	1/1:1,20:21:47.93:394,48,0	1/1:2,17:19:41.95:345,42,0	1/1:1,17:18:41.95:345,42,0	1/1:6,21:27:53.86:443,54,0	1/1:2,2:16:29.33:118,29,0	1/1:3,0:27:38.64:112,39,0	1/1:2,0:5:8.15:24,8,0
chr10	8331972	.	CTT	C	2764.31	PASS	AB=0.519;AC=19;AF=0.339;AN=56;BaseQRankSum=2.027;DP=410;FS=1.607;HRun=11;HaplotypeScore=71.4923;InbreedingCoeff=0.9169;MQ=81.70;MQ0=3;MQRankSum=1.045;QD=20.33;ReadPosRankSum=3.764;VQSLOD=3.1045;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,15:17:45.11:479,45,0	1/1:2,2:4:8.70:63,9,0	0/0:37,0:22:23.60:0,24,229	0/0:19,0:11:9.83:0,10,153	1/1:1,14:16:41.83:427,42,0	1/1:3,13:16:39.07:415,39,0	1/1:5,10:15:27.03:287,27,0	0/0:32,0:32:82.24:0,82,1194	0/0:7,0:7:14.97:0,15,179	0/0:4,0:13:22.46:0,22,77	0/1:1,1:14:1.48:1,0,65	0/0:9,0:9:21.03:0,21,289	0/0:16,0:17:38.57:0,39,526	0/0:14,0:14:36.09:0,36,527	0/0:1,0:10:20.37:0,20,75	1/1:1,10:13:35.56:343,36,0	1/1:2,16:18:42.10:447,42,0	1/1:3,6:9:15.03:160,15,0	0/0:12,0:12:27.09:0,27,415	0/0:25,0:25:69.22:0,69,1039	0/0:2,0:10:14.97:0,15,51	0/0:2,0:7:12.23:0,12,43	0/0:2,0:15:27.54:0,28,131	0/0:3,0:9:12.48:0,12,43	1/1:1,13:14:33.08:351,33,0	0/0:16,0:18:44.09:0,44,588	0/0:10,0:10:27.09:0,27,416	0/0:9,0:10:29.59:0,30,424
chr10	8337896	.	TTCTCTC	T	1358.21	PASS	AB=1.000;AC=19;AF=0.396;AN=48;BaseQRankSum=-0.464;DP=502;FS=5.162;HRun=0;HaplotypeScore=102.0890;InbreedingCoeff=0.4520;MQ=67.43;MQ0=21;MQRankSum=2.932;QD=8.33;ReadPosRankSum=2.603;VQSLOD=1.7901;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:18:9:0,9,145	./.	0/0:25,0:16:0.47:0,0,1	./.	0/0:22,0:21:5.91:0,6,68	0/1:22,0:20:19.66:20,0,66	0/1:17,0:17:14.78:15,0,19	0/0:41,0:40:2.71:0,3,5	1/1:6,0:6:9.03:154,9,0	0/0:19,0:19:15.05:0,15,348	0/0:18,0:18:0:0,0,0	1/1:10,3:13:3.01:44,3,0	1/1:9,0:9:9.03:167,9,0	./.	0/0:21,0:21:6.02:0,6,123	0/0:11,0:11:6.02:0,6,160	0/0:26,0:20:21.07:0,21,486	0/0:15,0:12:6.02:0,6,104	0/1:14,0:13:53.75:54,0,81	./.	1/1:11,0:11:18:228,18,0	0/0:21,0:21:3:0,3,71	0/0:14,0:14:3.01:0,3,52	0/0:22,0:21:12.04:0,12,286	1/1:16,0:16:9.50:178,9,0	1/1:15,7:19:12.77:357,13,0	1/1:24,0:24:15.02:227,15,0	1/1:9,0:7:6:75,6,0
chr10	8337948	.	CTGTGTGTGTGTGTG	C	463.58	PASS	AB=0.758;AC=5;AF=0.096;AN=52;BaseQRankSum=1.033;DP=409;FS=7.482;HRun=0;HaplotypeScore=142.1352;InbreedingCoeff=0.5648;MQ=41.77;MQ0=31;MQRankSum=-2.288;QD=8.92;ReadPosRankSum=1.733;VQSLOD=2.2579;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:12.01:0,12,634	0/0:5,0:4:3.01:0,3,165	./.	0/0:2,0:1:3.01:0,3,148	0/0:16,0:16:15:0,15,798	0/0:24,0:23:14.17:0,14,718	0/0:18,0:18:18.23:0,18,733	0/0:22,0:19:30.02:0,30,1010	0/0:8,0:8:10.85:0,11,362	1/1:10,5:15:14.98:550,15,0	0/1:8,5:13:0:0,0,0	0/0:13,0:11:15.52:0,16,743	0/0:19,0:19:33.11:0,33,1041	0/0:12,0:12:15.05:0,15,570	./.	0/0:12,0:12:17.87:0,18,849	0/0:26,0:19:24.43:0,24,1288	0/0:11,0:9:15.05:0,15,498	0/0:14,0:12:25.75:0,26,650	0/0:13,0:11:24.08:0,24,1126	0/0:20,0:19:26.88:0,27,1305	0/1:9,4:13:0.19:0,0,0	0/1:8,2:9:0:0,0,0	0/0:9,8:16:2.89:0,3,16	0/0:21,0:19:20.99:0,21,939	0/0:25,0:22:43.70:0,44,1821	0/0:20,0:19:36.33:0,36,1428	0/0:13,0:10:30.09:0,30,1167
chr10	8338503	.	A	AGT	1813.96	PASS	AB=0.902;AC=34;AF=0.630;AN=54;BaseQRankSum=-2.242;DP=582;FS=9.087;HRun=0;HaplotypeScore=141.6514;InbreedingCoeff=0.2523;MQ=58.29;MQ0=6;MQRankSum=0.149;QD=4.01;ReadPosRankSum=-1.259;VQSLOD=1.8945;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:24:7.32:34,7,0	1/1:3,0:9:3:26,3,0	1/1:22,0:17:0.47:1,0,0	./.	1/1:25,0:26:14.62:124,15,0	1/1:23,0:26:15.48:147,15,0	1/1:17,0:19:14.04:134,14,0	0/1:26,0:26:33.50:34,0,33	0/0:12,0:12:18.15:0,18,124	1/1:24,2:26:16.39:189,16,0	0/1:18,4:22:20.13:215,0,20	0/0:28,0:28:4.26:0,4,120	0/0:15,0:15:22.90:0,23,158	0/0:17,0:16:20.86:0,21,171	0/1:17,4:21:56.80:111,0,57	1/1:20,1:28:33:322,33,0	1/1:20,1:20:4.97:18,5,0	1/1:11,0:12:5.37:34,5,0	0/1:19,0:18:3.30:41,0,3	0/1:22,0:22:36.64:37,0,136	1/1:25,0:25:8.54:70,9,0	0/1:11,9:20:10.20:164,0,10	1/1:12,2:14:8.86:112,9,0	0/1:21,4:25:42.94:116,0,43	1/1:12,0:24:6:52,6,0	0/1:19,0:19:11.29:11,0,51	0/0:22,0:23:32.49:0,32,237	0/0:12,0:12:11.70:0,12,70
chr10	8338541	.	TGC	T	3165.01	PASS	AB=0.970;AC=33;AF=0.589;AN=56;BaseQRankSum=2.303;DP=526;FS=36.503;HRun=0;HaplotypeScore=185.3775;InbreedingCoeff=-0.6401;MQ=47.66;MQ0=13;MQRankSum=2.972;QD=6.02;ReadPosRankSum=-3.581;VQSLOD=1.1567;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:19,0:19:18.65:64,0,19	1/1:9,0:9:3.21:67,3,0	0/1:18,0:8:11.90:19,0,12	0/1:22,0:4:7.92:25,0,8	0/1:17,0:18:30.30:78,0,30	0/1:26,0:26:0.87:186,0,1	0/1:21,0:21:8.98:81,0,9	0/1:20,0:20:28.27:199,0,28	0/1:14,0:14:42.99:43,0,122	0/1:18,0:18:5.96:177,0,6	0/1:22,0:22:67.23:122,0,67	0/1:27,2:29:94.33:94,0,137	0/1:15,2:17:99:148,0,122	0/1:13,0:12:14.97:15,0,165	0/1:18,1:19:31.71:224,0,32	0/1:28,0:28:6.82:221,0,7	1/1:16,0:15:17.87:140,18,0	1/1:14,0:14:17.99:142,18,0	1/1:22,0:20:23.44:295,23,0	0/1:22,0:22:99:114,0,146	1/1:26,0:25:25.94:183,26,0	0/1:19,0:18:31.58:75,0,32	0/1:9,0:9:12.21:17,0,12	0/1:20,1:20:35.58:151,0,36	0/1:17,0:17:8.54:17,0,9	0/1:11,7:18:53.36:122,0,53	0/1:19,1:20:99:187,0,148	0/1:8,1:9:22.55:110,0,23
chr10	8338544	.	GCA	G	760.32	PASS	AB=0.976;AC=20;AF=0.357;AN=56;BaseQRankSum=-3.095;DP=506;FS=27.085;HRun=0;HaplotypeScore=198.0482;InbreedingCoeff=-0.2042;MQ=47.48;MQ0=12;MQRankSum=1.576;QD=2.23;ReadPosRankSum=-1.643;VQSLOD=1.0915;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:16,1:17:7.32:69,7,0	0/0:9,0:9:2.83:0,3,25	0/0:17,0:8:1.41:0,1,50	0/0:22,0:4:7.86:0,8,86	0/1:18,0:18:13.40:13,0,53	0/1:22,2:24:40.81:41,0,73	0/1:18,1:19:75.62:80,0,76	0/0:18,0:18:9.69:0,10,129	0/0:16,0:16:22.03:0,22,277	0/1:17,0:17:12.41:12,0,115	0/1:24,0:24:54.26:54,0,144	0/1:26,1:27:53.35:53,0,169	0/1:17,1:18:37.05:37,0,212	0/0:12,0:11:15.55:0,16,265	0/1:20,0:20:16.78:17,0,118	0/1:26,1:27:59.20:59,0,135	1/1:15,0:16:13.77:162,14,0	0/0:14,0:14:0.01:0,0,17	0/1:19,0:17:22.95:84,0,23	0/1:20,0:20:12.02:12,0,327	1/1:23,0:22:11.21:134,11,0	0/0:17,0:16:15.38:0,15,132	0/0:10,0:10:9.44:0,9,76	0/1:20,0:19:16.44:16,0,175	0/0:14,1:15:5.95:0,6,41	0/0:15,0:15:16.25:0,16,197	0/1:21,0:21:18.56:19,0,353	0/1:10,1:11:60.13:60,0,133
chr10	8340726	.	T	TCACA	1007.41	PASS	AC=30;AF=0.714;AN=42;BaseQRankSum=-1.221;DP=411;FS=2.811;HRun=0;HaplotypeScore=126.3878;InbreedingCoeff=0.3562;MQ=70.65;MQ0=5;MQRankSum=-1.701;QD=4.91;ReadPosRankSum=0.701;VQSLOD=2.6778;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:21:2.74:0,3,12	0/0:6,0:6:0:0,0,0	./.	./.	./.	./.	0/0:11,0:14:2.99:0,3,24	1/1:22,0:22:2.99:23,3,0	1/1:13,0:13:2.97:20,3,0	1/1:17,0:17:5.99:90,6,0	1/1:10,0:10:2.43:52,2,0	1/1:4,6:10:6.02:140,6,0	1/1:7,3:10:12:211,12,0	1/1:13,3:14:8.51:146,9,0	1/1:19,0:18:5.60:28,6,0	./.	0/0:19,0:19:0:0,0,0	./.	1/1:15,0:14:5.96:44,6,0	1/1:10,4:15:8.60:91,9,0	0/0:12,0:11:1.55:0,2,4	0/0:11,0:11:1.83:0,2,5	1/1:15,0:15:1.07:4,1,0	1/1:12,0:11:2.99:24,3,0	./.	1/1:10,0:10:6.01:94,6,0	1/1:11,2:13:5.85:79,6,0	1/1:8,0:8:6:63,6,0
chr10	8341098	.	C	CA	48.70	PASS	AC=8;AF=0.400;AN=20;BaseQRankSum=-2.486;DP=57;FS=3.041;HRun=0;HaplotypeScore=17.4256;InbreedingCoeff=0.4399;MQ=106.36;MQ0=1;MQRankSum=-2.971;QD=4.87;ReadPosRankSum=-1.516;VQSLOD=2.7171;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:13,0:6:9.45:0,9,64	0/0:14,0:10:18.72:0,19,140	./.	./.	./.	./.	0/0:2,0:2:0:0,0,0	./.	./.	./.	0/0:1,0:1:0:0,0,0	./.	0/0:1,0:1:0:0,0,0	1/1:2,0:2:2.97:20,3,0	./.	./.	./.	1/1:0,1:1:3.01:43,3,0	./.	./.	./.	./.	1/1:0,2:2:3.01:32,3,0	0/0:1,0:1:0:0,0,0	./.	1/1:5,0:5:3:37,3,0
chr10	8343896	.	A	AT	8016.94	PASS	AB=0.588;AC=21;AF=0.375;AN=56;BaseQRankSum=-14.221;DP=657;FS=7.593;HRun=8;HaplotypeScore=57.5710;InbreedingCoeff=0.9275;MQ=78.86;MQ0=0;MQRankSum=-1.463;QD=28.43;ReadPosRankSum=-0.935;VQSLOD=4.7817;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:96.04:0,96,879	0/0:11,0:11:30.02:0,30,275	0/0:19,0:19:35.97:0,36,318	0/0:11,0:11:23.93:0,24,205	0/0:36,0:36:99:0,108,988	0/0:32,0:32:96.05:0,96,879	0/0:14,0:14:29.96:0,30,260	1/1:4,27:31:81.20:903,81,0	1/1:2,17:19:51.15:589,51,0	0/0:29,0:29:78.04:0,78,714	0/0:20,0:20:57.01:0,57,516	1/1:0,19:19:54.16:623,54,0	1/1:5,27:34:81.07:907,81,0	1/1:6,26:32:50.77:836,51,0	0/0:24,0:24:60.01:0,60,545	0/0:32,0:32:87.03:0,87,795	0/0:18,0:18:51.01:0,51,462	0/0:14,0:14:41.98:0,42,376	1/1:3,16:19:48.12:541,48,0	1/1:4,24:28:69.16:778,69,0	1/1:3,21:24:63.19:727,63,0	0/0:21,0:21:54.02:0,54,494	0/0:16,0:16:45.01:0,45,407	0/0:22,0:22:60.03:0,60,549	0/0:19,0:19:53.98:0,54,486	1/1:2,29:31:84.23:958,84,0	1/1:3,32:35:90.26:1033,90,0	0/1:3,7:10:12.42:123,0,12
chr10	8344540	.	A	AGT	1030.22	PASS	AB=0.914;AC=29;AF=0.558;AN=52;BaseQRankSum=-0.798;DP=559;FS=2.327;HRun=0;HaplotypeScore=84.3759;InbreedingCoeff=0.2316;MQ=65.84;MQ0=19;MQRankSum=0.867;QD=2.82;ReadPosRankSum=-3.220;VQSLOD=1.4196;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:25,6:33:25.81:38,0,26	1/1:10,0:10:2.99:24,3,0	./.	./.	1/1:21,3:24:12.03:158,12,0	0/1:12,5:17:34.97:35,0,55	0/1:26,0:25:48.76:77,0,49	1/1:16,0:16:2.37:8,2,0	1/1:14,2:16:12.02:152,12,0	0/0:19,0:19:5.69:0,6,63	0/0:18,0:16:6.01:0,6,64	0/1:21,0:21:0:0,0,0	1/1:20,0:19:8.86:88,9,0	1/1:15,4:18:3.01:44,3,0	0/0:27,0:27:12.02:0,12,128	0/0:15,0:16:8.85:0,9,78	0/1:22,0:22:1.98:38,0,2	0/1:13,5:19:0.92:79,0,1	1/1:22,0:21:9.87:91,10,0	1/1:12,0:12:9.02:111,9,0	0/0:19,0:20:5.85:0,6,46	0/1:18,0:18:0:0,0,0	0/0:13,0:13:5.85:0,6,46	0/0:18,0:18:3:0,3,32	1/1:10,2:18:9.01:96,9,0	1/1:24,0:23:8.21:90,8,0	0/1:9,0:9:16.95:17,0,26	0/1:14,2:14:25.85:38,0,26
chr10	8346790	.	C	CAAAAAAAAAAAA	17247.80	PASS	AB=0.979;AC=54;AF=0.964;AN=56;BaseQRankSum=-1.856;DP=527;FS=0.000;HRun=15;HaplotypeScore=183.0849;InbreedingCoeff=0.1788;MQ=40.62;MQ0=16;MQRankSum=-2.113;QD=32.73;ReadPosRankSum=0.879;VQSLOD=1.4507;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:19:36.09:843,36,0	1/1:13,0:13:14.75:176,15,0	1/1:22,0:4:3.95:36,4,0	0/1:22,0:6:6.65:27,0,7	1/1:28,0:28:52.87:1377,53,0	1/1:5,11:25:6.57:180,7,0	1/1:12,0:11:18.03:430,18,0	1/1:25,0:23:37.87:456,38,0	1/1:16,0:14:24.04:521,24,0	1/1:24,0:19:38.41:814,38,0	1/1:14,0:13:17.64:466,18,0	1/1:17,0:15:24.41:488,24,0	1/1:14,0:14:30.04:912,30,0	1/1:22,0:19:36.04:1177,36,0	1/1:10,0:10:21.07:495,21,0	1/1:24,0:22:16.38:886,16,0	1/1:31,0:28:57.08:1686,57,0	1/1:21,0:18:39.06:1055,39,0	1/1:22,0:20:46.90:759,47,0	1/1:24,0:22:26.83:304,27,0	0/1:3,0:2:0:0,0,0	1/1:6,0:6:11.98:232,12,0	1/1:9,0:8:6.02:222,6,0	1/1:5,0:4:3.01:57,3,0	1/1:20,0:19:33.11:1125,33,0	1/1:28,0:28:71.72:1526,72,0	1/1:30,0:26:26.98:527,27,0	1/1:16,0:12:23.47:471,23,0
chr10	8346800	.	A	AG	895.38	PASS	AB=0.954;AC=10;AF=0.185;AN=54;BaseQRankSum=-0.938;DP=495;FS=26.138;HRun=0;HaplotypeScore=90.4485;InbreedingCoeff=-0.2461;MQ=53.22;MQ0=9;MQRankSum=1.453;QD=4.39;ReadPosRankSum=0.123;VQSLOD=1.1448;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:18:38.02:0,38,262	0/0:11,0:11:17.72:0,18,121	0/0:30,0:12:9.72:0,10,88	0/1:28,0:12:8.62:9,0,64	0/0:27,0:26:58.07:0,58,381	0/0:23,0:23:12.32:0,12,101	0/0:12,0:11:26.29:0,26,181	0/1:23,0:22:78.77:79,0,171	0/1:13,1:12:46.71:88,0,47	0/0:22,0:17:44.19:0,44,309	0/0:9,0:9:23.73:0,24,165	0/1:13,0:11:43.54:44,0,62	0/1:19,0:19:62.72:173,0,63	0/1:17,1:15:34.32:157,0,34	0/0:8,0:8:22.81:0,23,145	0/0:21,0:19:37.77:0,38,260	0/0:29,0:26:71.13:0,71,486	0/0:19,0:16:44.54:0,45,314	0/1:22,0:22:99:112,0,238	0/1:11,11:21:86.08:92,0,86	./.	0/0:7,0:7:19.92:0,20,145	0/0:3,0:3:8.91:0,9,65	0/0:2,0:1:2.96:0,3,19	0/0:23,0:22:39.92:0,40,284	0/1:26,0:26:99:208,0,171	0/0:24,0:20:5.89:0,6,119	0/1:18,0:14:74.57:75,0,92
chr10	8348146	.	T	TACACAC	9155.29	PASS	AB=0.850;AC=51;AF=0.981;AN=52;BaseQRankSum=-1.527;DP=732;FS=0.000;HRun=0;HaplotypeScore=214.4419;InbreedingCoeff=0.2756;MQ=55.89;MQ0=11;MQRankSum=0.456;QD=13.83;ReadPosRankSum=1.390;VQSLOD=3.8087;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:41,3:44:33.07:659,33,0	1/1:7,5:13:5.68:193,6,0	./.	./.	1/1:21,2:23:17.94:299,18,0	1/1:16,1:18:21.03:399,21,0	1/1:16,6:24:8.13:219,8,0	1/1:30,0:29:26.48:411,26,0	1/1:14,1:20:18.06:478,18,0	1/1:22,0:22:15.05:361,15,0	1/1:14,0:14:2.04:6,2,0	1/1:19,0:26:11.87:343,12,0	1/1:17,1:24:9.03:268,9,0	1/1:27,0:32:12:267,12,0	1/1:44,0:45:29.13:673,29,0	1/1:35,6:42:46.64:1130,47,0	1/1:17,3:30:21.07:477,21,0	1/1:14,0:26:3.90:40,4,0	1/1:14,0:19:26.12:473,26,0	0/1:14,0:17:0:0,0,0	1/1:16,0:16:9.03:173,9,0	1/1:34,0:34:21.08:407,21,0	1/1:21,0:21:12.68:187,13,0	1/1:31,0:31:9.57:152,10,0	1/1:19,9:33:12.79:298,13,0	1/1:18,1:24:30.09:612,30,0	1/1:16,1:20:14.98:413,15,0	1/1:10,0:12:12.47:218,12,0
chr10	8348152	.	C	CACACACACAT	8056.42	PASS	AB=0.978;AC=28;AF=0.519;AN=54;BaseQRankSum=6.271;DP=761;FS=6.239;HRun=0;HaplotypeScore=255.1976;InbreedingCoeff=-0.4668;MQ=53.65;MQ0=12;MQRankSum=-5.496;QD=12.43;ReadPosRankSum=5.210;VQSLOD=2.3727;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:40,0:40:99:274,0,211	0/1:14,0:14:59.87:66,0,60	0/0:29,0:14:9.01:0,9,86	0/0:41,0:16:26.15:0,26,255	0/1:22,0:22:72.13:132,0,72	0/1:21,0:20:92.88:133,0,93	0/1:25,0:24:78.27:92,0,78	0/1:30,0:29:99:188,0,407	0/1:22,0:22:80.77:345,0,81	1/1:9,15:29:54.85:1188,55,0	./.	0/1:26,0:26:74.35:336,0,74	0/1:22,0:22:77.35:238,0,77	0/1:33,0:33:99:193,0,187	1/1:8,34:46:16.86:1312,17,0	0/1:41,0:41:99:507,0,127	0/1:29,0:29:58.13:281,0,58	0/0:25,0:25:16.40:0,16,128	0/1:21,0:21:99:407,0,171	0/1:18,0:18:1.12:1,0,135	0/1:19,0:19:76.40:80,0,76	1/1:11,24:41:14.47:595,14,0	1/1:4,17:25:8.48:359,8,0	0/1:6,24:32:10.19:518,0,10	0/1:37,0:37:71.16:71,0,225	0/1:27,0:27:99:334,0,233	0/1:18,0:18:99:355,0,101	0/1:9,0:9:47.55:51,0,48
chr10	8348154	.	C	CACACACAT	7597.45	PASS	AB=0.997;AC=26;AF=0.464;AN=56;BaseQRankSum=9.156;DP=747;FS=6.751;HRun=0;HaplotypeScore=232.1962;InbreedingCoeff=-0.5600;MQ=51.69;MQ0=12;MQRankSum=-5.484;QD=11.96;ReadPosRankSum=7.911;VQSLOD=2.0522;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:40,0:40:99:273,0,210	0/1:15,0:15:59.66:89,0,60	0/0:26,0:12:11.94:0,12,107	0/0:42,0:15:26.16:0,26,257	0/1:22,0:22:65.81:132,0,66	0/1:21,0:20:99:159,0,111	0/1:25,0:24:77.06:114,0,77	0/1:28,0:27:99:195,0,405	0/1:23,0:23:99:395,0,125	0/1:28,1:28:14.30:887,0,14	0/0:19,0:19:5.67:0,6,35	0/1:25,0:25:73.98:292,0,74	0/1:22,0:22:76.35:267,0,76	0/1:32,0:32:99:243,0,209	0/1:41,1:42:4.07:956,0,4	0/1:40,0:40:99:584,0,134	0/1:29,0:29:52.16:369,0,52	0/0:24,0:24:6.12:0,6,116	0/1:21,0:21:99:450,0,177	0/1:19,0:19:1.12:1,0,135	0/1:20,0:20:77.48:77,0,93	1/1:36,1:38:14.92:516,15,0	1/1:24,2:26:8.97:267,9,0	0/1:31,0:31:9.47:416,0,9	0/1:35,0:35:99:109,0,205	0/1:27,0:27:99:371,0,236	0/1:18,0:18:99:372,0,101	0/1:7,0:7:45.56:61,0,46
chr10	8348283	.	C	CA	5705.21	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-15.370;DP=724;FS=9.835;HRun=8;HaplotypeScore=72.6100;InbreedingCoeff=0.9953;MQ=79.69;MQ0=0;MQRankSum=-3.213;QD=27.70;ReadPosRankSum=1.859;VQSLOD=5.1679;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,23:27:66.20:762,66,0	1/1:1,6:7:18.05:208,18,0	0/0:20,0:20:34.01:0,34,359	0/0:20,0:20:45:0,45,401	1/1:5,23:28:69.16:781,69,0	1/1:2,16:18:45.10:505,45,0	1/1:4,25:28:69.21:796,69,0	0/0:38,0:38:99:0,102,933	0/0:23,0:23:63.01:0,63,571	0/0:35,0:35:81.04:0,81,741	0/0:26,0:26:75.03:0,75,682	0/0:21,0:21:54.02:0,54,494	0/0:31,0:31:87.04:0,87,796	0/0:27,0:27:63.02:0,63,576	0/0:39,0:39:83.49:0,83,936	1/1:4,25:29:20.30:741,20,0	1/1:4,18:22:26.69:561,27,0	1/1:3,18:21:51.15:589,51,0	0/0:32,0:31:78.01:0,78,707	0/0:28,0:28:78.04:0,78,714	0/0:19,0:19:51.02:0,51,467	0/0:22,0:22:66.04:0,66,604	0/0:29,0:29:78.02:0,78,708	0/0:31,0:31:69.02:0,69,627	1/1:1,24:25:66.20:762,66,0	0/0:36,0:36:96.04:0,96,875	0/0:34,0:33:90.03:0,90,824	0/0:7,0:7:15:0,15,137
chr10	8348766	.	CT	C	8480.70	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=11.903;DP=585;FS=4.793;HRun=1;HaplotypeScore=58.2093;InbreedingCoeff=0.9874;MQ=66.05;MQ0=0;MQRankSum=-1.635;QD=38.03;ReadPosRankSum=0.151;VQSLOD=5.1624;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:57.19:0,57,895	0/0:10,0:10:30.09:0,30,457	0/0:9,0:9:26.92:0,27,379	0/0:10,0:10:9.34:0,9,301	0/0:31,0:31:93.32:0,93,1482	0/0:20,0:20:60.20:0,60,957	0/0:11,0:11:33.11:0,33,528	1/1:0,24:24:69.23:962,69,0	1/1:0,19:19:51.17:713,51,0	0/0:37,0:37:99:0,108,1709	0/0:24,0:24:72.21:0,72,1101	1/1:0,18:18:45.15:629,45,0	1/1:0,18:18:45.15:629,45,0	1/1:0,19:19:45.15:629,45,0	0/0:24,0:24:72.23:0,72,1127	0/0:30,0:30:90.31:0,90,1438	0/0:28,0:28:81.21:0,81,1243	0/0:19,0:19:51.07:0,51,781	1/1:0,24:24:72.24:999,72,0	1/1:0,31:31:84.28:1167,84,0	1/1:0,20:20:57.19:797,57,0	0/0:18,0:18:54.18:0,54,859	0/0:27,0:27:81.26:0,81,1271	0/0:10,0:10:30.10:0,30,480	0/0:35,0:35:99:0,105,1652	1/1:0,18:18:48.16:660,48,0	1/1:0,27:27:81.27:1130,81,0	1/1:0,5:5:12.04:168,12,0
chr10	8349323	.	AAAGGTG	A	16960.38	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=19.518;DP=698;FS=19.762;HRun=0;HaplotypeScore=179.7404;InbreedingCoeff=0.9985;MQ=83.23;MQ0=0;MQRankSum=-20.030;QD=52.03;ReadPosRankSum=2.886;VQSLOD=3.6306;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,38:41:90.31:2048,90,0	1/1:0,12:12:36.12:806,36,0	0/0:29,0:29:75.25:0,75,2249	0/0:26,0:26:58.34:0,58,1920	1/1:2,17:19:42.01:829,42,0	1/1:2,13:15:39.13:876,39,0	1/1:4,11:15:33.11:769,33,0	0/0:31,0:31:84.28:0,84,2772	0/0:31,0:31:90.31:0,90,3209	1/1:7,19:26:57.18:1283,57,0	1/1:5,17:22:42.01:829,42,0	0/0:34,0:34:99:0,99,3482	0/0:30,0:30:90.31:0,90,3192	0/0:33,0:33:93.32:0,93,3284	1/1:4,28:32:81.28:1855,81,0	1/1:2,35:37:99:2414,105,0	1/1:5,21:26:51.18:1189,51,0	1/1:0,9:9:27.09:629,27,0	0/0:26,0:26:66.20:0,66,2214	0/0:23,0:23:66.21:0,66,2256	0/0:39,0:39:99:0,114,4050	1/1:0,20:20:51.13:1106,51,0	1/1:1,11:12:30.06:649,30,0	1/1:6,11:17:17.61:419,18,0	1/1:3,20:23:57.19:1260,57,0	0/0:27,0:27:75.26:0,75,2656	0/0:22,0:22:60.19:0,60,2041	0/0:21,0:21:60.21:0,60,2078
chr10	8350529	.	AAAC	A	5233.06	PASS	AB=0.994;AC=32;AF=0.571;AN=56;BaseQRankSum=-2.729;DP=541;FS=6.174;HRun=0;HaplotypeScore=105.7180;InbreedingCoeff=0.2736;MQ=79.00;MQ0=5;MQRankSum=-2.546;QD=12.49;ReadPosRankSum=4.910;VQSLOD=4.0808;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:29,2:31:42.74:243,43,0	0/1:10,0:10:29.93:33,0,30	0/0:27,0:19:50.84:0,51,583	0/0:20,0:16:26.16:0,26,396	1/1:28,0:28:59.58:319,60,0	1/1:22,4:25:44.48:307,44,0	0/1:14,1:15:14.29:88,0,14	0/1:23,0:23:49.88:50,0,420	0/1:22,0:22:11.15:11,0,378	1/1:1,23:24:69.12:934,69,0	1/1:2,22:24:45.17:600,45,0	0/1:18,0:18:16.82:17,0,343	0/0:17,0:17:20.01:0,20,405	0/0:12,0:12:32.92:0,33,289	1/1:0,17:17:41.87:632,42,0	1/1:20,0:20:36.25:182,36,0	1/1:29,0:28:18.88:115,19,0	0/1:12,0:12:24.16:30,0,24	0/1:23,0:23:71.55:72,0,354	0/0:20,0:20:33.72:0,34,543	0/0:13,0:13:8.18:0,8,73	1/1:1,16:17:41.99:606,42,0	1/1:2,15:17:31.51:571,32,0	1/1:0,12:12:21.07:325,21,0	0/1:17,0:17:42.96:49,0,43	0/1:23,0:23:39.89:40,0,438	0/1:11,0:11:11.13:11,0,252	0/0:13,0:13:36.02:0,36,377
chr10	8350530	.	AAC	A	6628.57	PASS	AB=0.933;AC=37;AF=0.661;AN=56;BaseQRankSum=-4.500;DP=537;FS=25.585;HRun=0;HaplotypeScore=92.4962;InbreedingCoeff=0.2325;MQ=79.16;MQ0=5;MQRankSum=-1.162;QD=14.93;ReadPosRankSum=4.725;VQSLOD=2.8591;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,28:31:59.18:728,59,0	0/1:1,9:10:9.30:123,0,9	0/0:28,0:20:52.99:0,53,481	0/0:19,0:15:22.54:0,23,280	1/1:0,27:27:70.60:682,71,0	1/1:4,21:24:51.08:610,51,0	1/1:3,12:15:10.03:231,10,0	0/1:24,0:24:85.53:86,0,192	0/1:23,0:23:83.23:83,0,106	1/1:24,0:24:68.78:539,69,0	1/1:23,0:23:52.44:359,52,0	0/1:18,0:18:22.04:22,0,146	0/1:17,0:17:16.19:16,0,150	0/0:12,0:12:16.46:0,16,76	1/1:17,0:17:41.31:312,41,0	1/1:7,14:21:62.17:731,62,0	1/1:2,25:26:39.24:591,39,0	1/1:1,10:11:6.16:186,6,0	0/1:22,0:22:99:112,0,121	0/0:21,0:21:3.90:0,4,232	0/1:11,2:13:8.85:55,0,9	1/1:17,0:17:41.33:304,41,0	1/1:16,1:17:31.79:323,32,0	1/1:12,0:12:20.92:163,21,0	1/1:2,15:17:3.51:295,4,0	0/1:22,0:22:56.08:56,0,162	0/1:11,0:11:20.29:20,0,84	0/0:13,0:13:31.39:0,31,185
chr10	8350531	.	AC	A	5155.03	PASS	AB=1.000;AC=47;AF=0.839;AN=56;BaseQRankSum=-1.659;DP=534;FS=3.056;HRun=4;HaplotypeScore=90.4408;InbreedingCoeff=0.4630;MQ=80.01;MQ0=5;MQRankSum=-3.719;QD=10.88;ReadPosRankSum=1.767;VQSLOD=2.4141;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:30,1:31:58.87:373,59,0	1/1:10,0:10:11.78:72,12,0	0/0:27,0:20:46.72:0,47,360	0/0:19,1:16:25:0,25,236	1/1:27,0:27:70.72:443,71,0	1/1:25,0:24:50.01:302,50,0	1/1:15,1:16:22.61:159,23,0	0/1:25,0:25:16.01:221,0,16	1/1:21,2:23:20.43:219,20,0	1/1:24,0:24:67.81:439,68,0	1/1:22,1:23:52.61:323,53,0	1/1:18,0:18:5.73:72,6,0	0/1:16,0:16:9.21:82,0,9	1/1:12,0:12:0.97:19,1,0	1/1:17,0:17:38.24:238,38,0	1/1:20,1:21:62.13:432,62,0	1/1:26,1:26:47.03:303,47,0	1/1:11,0:11:14.71:89,15,0	1/1:21,0:21:28.10:239,28,0	0/1:20,0:20:1.02:49,0,1	1/1:3,10:13:17.99:196,18,0	1/1:17,0:17:39.66:228,40,0	1/1:17,0:17:31.14:231,31,0	1/1:12,0:12:20.56:122,21,0	1/1:16,0:16:23.54:143,24,0	1/1:21,0:21:12.25:119,12,0	1/1:10,1:11:3.46:40,3,0	0/0:12,0:12:0.02:0,0,7
chr10	8352276	.	A	AAGGCAC	12586.98	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-2.301;DP=786;FS=5.499;HRun=0;HaplotypeScore=178.2052;InbreedingCoeff=0.9974;MQ=84.78;MQ0=0;MQRankSum=-16.069;QD=71.93;ReadPosRankSum=-0.514;VQSLOD=5.2605;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:71.68:0,72,1880	0/0:12,0:12:30.10:0,30,692	0/0:22,0:22:54.18:0,54,1104	0/0:32,0:32:71.37:0,71,1330	0/0:43,0:43:99:0,120,2662	0/0:37,0:37:99:0,102,2260	0/0:31,0:31:87.28:0,87,1907	0/0:32,0:32:89.36:0,89,1895	0/0:20,0:20:57.20:0,57,1272	1/1:11,31:42:99:3902,117,0	1/1:5,17:23:48.16:1621,48,0	0/0:24,0:24:60.21:0,60,1359	0/0:37,0:37:99:0,105,2343	0/0:23,0:23:57.20:0,57,1312	1/1:9,20:30:63.22:2041,63,0	0/0:36,0:36:99:0,102,2323	0/0:26,0:26:72.21:0,72,1568	0/0:20,0:20:57.20:0,57,1239	0/0:25,0:25:66.18:0,66,1355	0/0:35,0:35:87.28:0,87,1916	0/0:32,0:32:90.24:0,90,1883	1/1:11,13:25:42.14:1388,42,0	1/1:7,28:36:87.21:2957,87,0	1/1:3,15:19:21.07:679,21,0	0/0:27,0:27:81.27:0,81,1802	0/0:29,0:29:81.26:0,81,1718	0/0:30,0:30:78.27:0,78,1775	0/0:6,0:6:18.06:0,18,415
chr10	8352822	.	T	TTGA	31115.59	PASS	AB=0.547;AC=39;AF=0.696;AN=56;BaseQRankSum=12.075;DP=739;FS=0.639;HRun=0;HaplotypeScore=131.8449;InbreedingCoeff=0.9110;MQ=81.47;MQ0=0;MQRankSum=-6.589;QD=58.05;ReadPosRankSum=3.716;VQSLOD=6.7587;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,47:53:99:3125,138,0	1/1:1,8:9:21.07:476,21,0	0/0:22,0:22:57.14:0,57,877	0/0:22,0:22:28.66:0,29,779	1/1:2,27:29:63.22:1411,63,0	1/1:2,17:21:57.20:1247,57,0	1/1:1,32:34:90.31:2021,90,0	1/1:4,26:32:87.28:1862,87,0	1/1:0,20:20:60.21:1359,60,0	0/0:24,0:24:69.21:0,69,1071	0/0:21,0:21:57.14:0,57,896	1/1:4,33:37:99:2402,108,0	1/1:2,26:28:72.25:1631,72,0	1/1:2,27:30:75.26:1699,75,0	0/0:43,0:43:99:0,129,2142	1/1:1,37:39:99:2379,105,0	1/1:2,26:29:72.25:1630,72,0	1/1:1,15:16:48.16:1087,48,0	1/1:4,15:20:57.20:1254,57,0	1/1:1,25:27:72.25:1605,72,0	1/1:5,24:29:54.19:1206,54,0	0/0:29,0:29:78.24:0,78,1236	0/0:15,0:15:42.14:0,42,676	0/0:27,0:27:75.26:0,75,1250	1/1:1,20:22:57.20:1292,57,0	0/1:5,22:29:18.79:1479,0,19	1/1:2,25:27:75.26:1680,75,0	1/1:0,5:5:12.04:272,12,0
chr10	8353573	.	CT	C	7998.66	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-11.435;DP=521;FS=20.500;HRun=10;HaplotypeScore=64.8869;InbreedingCoeff=0.9664;MQ=79.26;MQ0=2;MQRankSum=-3.729;QD=20.15;ReadPosRankSum=2.100;VQSLOD=3.8823;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,41:46:99:938,108,0	1/1:1,10:11:26.99:234,27,0	0/0:17,0:14:4.53:0,5,218	0/0:20,0:17:23.61:0,24,172	1/1:1,23:24:59.93:515,60,0	1/1:2,21:23:59.99:521,60,0	1/1:1,13:14:29.99:260,30,0	1/1:11,15:26:44.90:377,45,0	1/1:0,16:16:47.99:417,48,0	0/0:8,0:19:28.57:0,29,156	0/0:3,0:21:47.65:0,48,269	1/1:4,17:22:41.03:345,41,0	1/1:4,8:12:23.99:208,24,0	1/1:3,10:13:20.96:179,21,0	0/0:0,0:13:28.41:0,28,142	1/1:2,11:13:29.98:260,30,0	1/1:4,24:28:68.98:599,69,0	1/1:2,20:23:55.03:449,55,0	1/1:5,20:25:59.97:518,60,0	1/1:2,27:29:77.90:668,78,0	1/1:2,7:9:17.98:156,18,0	0/0:1,0:7:17.04:0,17,85	0/0:1,0:15:34.26:0,34,189	0/0:3,0:12:25.73:0,26,147	1/1:3,16:19:44.99:391,45,0	1/1:1,17:18:50.98:443,51,0	1/1:1,19:20:47.99:417,48,0	1/1:2,4:6:12:104,12,0
chr10	8356073	.	GA	G	8320.71	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=11.347;DP=569;FS=1.224;HRun=10;HaplotypeScore=78.3434;InbreedingCoeff=0.9712;MQ=68.60;MQ0=3;MQRankSum=-2.833;QD=20.80;ReadPosRankSum=1.209;VQSLOD=5.7336;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,23:29:62.98:547,63,0	1/1:1,12:13:29.99:260,30,0	0/0:18,0:13:26.94:0,27,213	0/0:11,0:9:7.83:0,8,61	1/1:4,28:32:80.97:702,81,0	1/1:2,15:17:38.99:339,39,0	1/1:3,11:14:23.99:208,24,0	1/1:7,19:26:56.94:480,57,0	1/1:4,12:16:38.72:315,39,0	0/0:28,0:28:78.20:0,78,851	0/0:29,0:29:78.20:0,78,846	1/1:4,12:16:38.97:329,39,0	1/1:4,14:18:41.94:349,42,0	1/1:0,19:19:56.89:471,57,0	0/0:14,0:14:7.06:0,7,306	1/1:2,16:18:41.99:365,42,0	1/1:1,19:20:44.88:391,45,0	1/1:2,9:11:23.98:208,24,0	1/1:1,15:16:44.92:371,45,0	1/1:9,23:32:86.95:736,87,0	1/1:1,9:10:21:182,21,0	0/0:25,0:25:48.13:0,48,531	0/0:29,0:29:52.35:0,52,804	0/0:15,0:15:42.11:0,42,464	1/1:3,18:21:47.98:417,48,0	1/1:4,20:24:68.94:580,69,0	1/1:7,20:27:65.86:542,66,0	1/1:5,16:21:62.94:528,63,0
chr10	8356084	.	GT	G	5379.88	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=11.943;DP=549;FS=1.108;HRun=7;HaplotypeScore=88.9504;InbreedingCoeff=0.9280;MQ=67.86;MQ0=3;MQRankSum=-3.456;QD=24.13;ReadPosRankSum=0.148;VQSLOD=4.7781;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:71.23:0,71,582	0/0:11,0:11:29.94:0,30,240	0/0:18,1:13:13.71:0,14,126	0/1:8,0:6:9.35:9,0,22	0/0:32,0:32:76.88:0,77,710	0/0:17,0:17:44.92:0,45,384	0/0:13,0:13:29.65:0,30,245	1/1:7,15:22:54.09:535,54,0	1/1:3,11:15:41.98:405,42,0	0/0:29,0:29:72.23:0,72,904	0/0:27,0:27:69.22:0,69,868	1/1:1,15:16:39.07:387,39,0	1/1:3,14:17:48.08:473,48,0	1/1:3,16:19:48.04:460,48,0	0/0:11,0:11:24.08:0,24,302	0/0:21,0:21:56.99:0,57,516	0/0:19,0:19:44.58:0,45,344	0/0:10,0:10:26.89:0,27,228	1/1:7,11:18:45.05:436,45,0	1/1:9,22:31:81.14:803,81,0	0/0:9,0:9:23.98:0,24,208	0/0:19,0:19:54.17:0,54,668	0/0:30,0:30:89.85:0,90,1080	0/0:14,0:14:30.10:0,30,377	0/0:18,0:18:47.97:0,48,405	1/1:2,24:26:72.13:718,72,0	1/1:1,28:29:66.12:653,66,0	1/1:6,16:22:51.09:501,51,0
chr10	8357547	.	GA	G	3743.02	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=12.210;DP=675;FS=4.272;HRun=10;HaplotypeScore=75.9830;InbreedingCoeff=0.9584;MQ=56.47;MQ0=12;MQRankSum=1.369;QD=17.25;ReadPosRankSum=4.879;VQSLOD=4.3261;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,33:37:77.98:677,78,0	1/1:4,6:10:14.99:130,15,0	0/0:18,1:6:3.14:0,3,51	0/0:22,0:10:7.43:0,7,81	1/1:11,21:32:44.97:390,45,0	1/1:3,21:24:47.94:409,48,0	1/1:5,10:14:26.99:234,27,0	0/0:31,0:30:66.14:0,66,716	0/0:21,0:22:56.89:0,57,575	0/0:23,0:23:53.98:0,54,578	0/0:32,0:33:78.19:0,78,846	0/0:20,0:20:54.09:0,54,576	0/0:19,0:19:45.08:0,45,478	0/0:19,0:19:32.98:0,33,347	0/0:20,0:20:48.12:0,48,525	1/1:1,16:17:44.99:390,45,0	1/1:4,39:42:86.97:755,87,0	1/1:1,20:21:35.52:470,36,0	0/0:31,0:30:84.03:0,84,897	0/0:28,0:28:69.10:0,69,730	0/0:22,0:22:45.08:0,45,471	0/0:14,0:14:36.07:0,36,382	0/0:28,0:27:69.02:0,69,719	0/0:32,0:34:80.98:0,81,865	1/1:4,14:18:32.99:286,33,0	0/0:24,0:22:48.11:0,48,516	0/0:22,0:22:34.05:0,34,561	0/0:21,0:20:50.97:0,51,545
chr10	8357654	.	GAAGGAAGATGAGAAAGAC	G	6656.38	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=10.774;DP=657;FS=1.063;HRun=0;HaplotypeScore=284.7217;InbreedingCoeff=0.9251;MQ=72.29;MQ0=3;MQRankSum=-11.164;QD=44.67;ReadPosRankSum=1.184;VQSLOD=3.9811;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,22:26:18.06:906,18,0	1/1:3,10:13:12.04:604,12,0	0/0:38,0:33:55.43:0,55,2548	0/0:41,0:31:45.24:0,45,1719	1/1:13,11:24:57.18:1743,57,0	1/1:0,12:12:12.04:475,12,0	1/1:3,10:13:3.01:151,3,0	0/0:31,0:31:81.28:0,81,3967	0/0:21,0:21:57.18:0,57,3771	0/0:26,0:26:57.20:0,57,3825	0/0:15,0:15:39.13:0,39,2980	0/0:20,0:20:57.18:0,57,3742	0/0:22,0:22:54.19:0,54,4136	0/0:24,0:24:66.23:0,66,4547	0/0:28,0:28:69.24:0,69,4918	1/1:1,6:7:12.04:598,12,0	1/1:18,3:21:35.29:1400,35,0	1/1:2,14:16:3.01:151,3,0	0/0:36,0:36:84.29:0,84,5019	0/0:33,0:33:90.28:0,90,6121	0/0:32,0:32:93.28:0,93,6216	0/0:14,0:14:39.13:0,39,2479	0/0:23,0:23:57.20:0,57,3924	0/0:29,0:29:69.24:0,69,4962	1/1:2,15:17:15.05:628,15,0	0/0:35,0:35:84.28:0,84,5227	0/0:24,0:24:63.22:0,63,4385	0/0:16,0:16:42.14:0,42,2879
chr10	8357662	.	ATG	A	1397.69	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=11.914;DP=624;FS=1.676;HRun=0;HaplotypeScore=105.6574;InbreedingCoeff=0.9197;MQ=68.98;MQ0=2;MQRankSum=-11.755;QD=10.43;ReadPosRankSum=2.792;VQSLOD=3.3436;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:22:12.20:81,12,0	1/1:10,0:10:11.50:59,12,0	0/0:36,0:32:85.52:0,86,1553	0/0:30,0:22:53.18:0,53,846	1/1:17,8:25:54.33:610,54,0	1/1:12,0:12:11.76:106,12,0	1/1:10,0:10:2.88:15,3,0	0/0:34,0:34:99:0,102,1947	0/0:24,0:24:69.22:0,69,1364	0/0:23,0:23:66.20:0,66,1302	0/0:15,0:15:42.14:0,42,842	0/0:21,0:21:63.20:0,63,1212	0/0:18,0:18:54.19:0,54,1087	0/0:23,0:23:66.21:0,66,1290	0/0:28,0:28:81.28:0,81,1630	1/1:6,0:6:11.63:71,12,0	1/1:7,12:19:44.15:538,44,0	1/1:14,0:14:2.88:15,3,0	0/0:36,0:36:99:0,108,2149	0/0:33,0:33:96.30:0,96,1853	0/0:36,0:36:99:0,108,2020	0/0:14,0:14:42.14:0,42,839	0/0:22,0:22:66.23:0,66,1334	0/0:25,0:25:72.25:0,72,1443	1/1:15,0:15:14.63:100,15,0	0/0:32,0:32:93.27:0,93,1808	0/0:21,0:21:63.20:0,63,1239	0/0:19,0:19:57.20:0,57,1154
chr10	8357803	.	TAGAG	T	7543.23	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=16.907;DP=647;FS=15.013;HRun=0;HaplotypeScore=129.0958;InbreedingCoeff=0.9164;MQ=74.22;MQ0=0;MQRankSum=-16.234;QD=40.56;ReadPosRankSum=2.428;VQSLOD=4.5301;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,28:33:66.54:1295,67,0	1/1:0,5:5:15.05:276,15,0	0/0:16,0:15:33.11:0,33,774	0/1:13,0:14:18.48:18,0,310	1/1:2,20:22:32.80:618,33,0	1/1:1,16:17:42.10:775,42,0	1/1:3,14:17:39.05:735,39,0	0/0:34,0:34:99:0,99,2687	0/0:33,0:33:96.32:0,96,2583	0/0:22,0:22:63.22:0,63,1720	0/0:21,0:21:63.22:0,63,1751	0/0:20,0:20:60.19:0,60,1601	0/0:23,0:23:69.24:0,69,1918	0/0:31,0:31:93.31:0,93,2531	0/0:26,0:26:78.25:0,78,2037	1/1:1,22:23:63.22:1230,63,0	1/1:2,18:20:51.09:929,51,0	1/1:0,5:5:15.05:299,15,0	0/0:22,0:22:60.21:0,60,1602	0/0:26,0:26:78.27:0,78,2168	0/0:37,0:37:99:0,108,2938	0/0:21,0:21:63.22:0,63,1717	0/0:21,0:21:63.22:0,63,1727	0/0:24,0:24:69.22:0,69,1861	1/1:2,28:30:75.14:1368,75,0	0/0:31,0:31:93.32:0,93,2593	0/0:38,0:38:99:0,114,3180	0/0:15,0:15:45.15:0,45,1259
chr10	8358653	.	C	CA	7124.06	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=2.817;DP=677;FS=7.388;HRun=5;HaplotypeScore=69.2589;InbreedingCoeff=0.9998;MQ=82.94;MQ0=0;MQRankSum=-1.921;QD=34.25;ReadPosRankSum=0.558;VQSLOD=4.9785;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,21:22:63.20:829,63,0	1/1:0,10:10:30.10:395,30,0	0/0:17,0:17:36.09:0,36,387	0/0:23,0:23:59.46:0,59,594	1/1:3,33:36:93.20:1164,93,0	1/1:0,25:25:72.23:947,72,0	1/1:2,18:20:36.12:473,36,0	0/0:31,0:31:81.18:0,81,858	0/0:22,0:22:66.17:0,66,709	0/0:37,0:37:99:0,105,1129	0/0:27,0:27:78.20:0,78,838	0/0:22,0:22:66.17:0,66,708	0/0:24,0:24:69.17:0,69,741	0/0:30,0:30:90.23:0,90,966	0/0:23,0:23:66.17:0,66,709	1/1:2,25:27:72.23:948,72,0	1/1:1,16:17:39.13:513,39,0	1/1:1,16:17:45.15:592,45,0	0/0:23,0:23:63.16:0,63,676	0/0:39,0:39:99:0,108,1147	0/0:17,0:17:48.12:0,48,516	0/0:23,0:23:63.16:0,63,677	0/0:29,0:29:84.21:0,84,903	0/0:13,0:13:33.08:0,33,354	1/1:0,34:34:96.31:1263,96,0	0/0:31,0:31:87.22:0,87,935	0/0:27,0:27:78.20:0,78,837	0/0:11,0:11:33.08:0,33,355
chr10	8359122	.	GTGTGT	G	4768.20	PASS	AB=0.946;AC=26;AF=0.464;AN=56;BaseQRankSum=5.645;DP=495;FS=6.975;HRun=0;HaplotypeScore=143.5340;InbreedingCoeff=0.3196;MQ=64.89;MQ0=6;MQRankSum=-8.148;QD=17.34;ReadPosRankSum=-2.828;VQSLOD=3.4078;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,11:25:41.98:565,42,0	0/1:3,4:7:8.55:146,0,9	0/0:38,0:23:66.01:0,66,1283	0/0:33,0:27:68.39:0,68,1681	1/1:1,11:13:21.91:320,22,0	1/1:5,12:17:49.98:755,50,0	1/1:2,18:20:46.93:783,47,0	0/1:16,0:16:89.62:90,0,272	0/1:13,0:14:0.54:1,0,185	0/0:16,0:16:45.77:0,46,782	0/0:15,0:15:19.01:0,19,621	0/1:15,0:15:24.65:25,0,195	0/1:18,0:18:12.07:12,0,218	0/1:15,0:15:30.77:31,0,89	0/0:24,0:24:67.79:0,68,1261	1/1:2,18:20:43.96:730,44,0	1/1:4,4:9:18.02:254,18,0	1/1:5,7:12:6.17:260,6,0	0/1:11,0:10:32.47:69,0,32	0/1:10,0:10:13.73:14,0,130	0/1:33,0:33:99:169,0,190	0/0:15,0:15:44.31:0,44,832	0/0:23,0:23:64.48:0,64,1240	0/0:24,0:24:68.28:0,68,1226	1/1:5,8:13:35.35:510,35,0	0/0:12,0:12:14.75:0,15,226	0/0:18,0:18:14.06:0,14,375	0/1:5,0:5:7.52:36,0,8
chr10	8359124	.	GT	G	1482.82	PASS	AB=0.926;AC=25;AF=0.446;AN=56;BaseQRankSum=5.444;DP=496;FS=2.100;HRun=1;HaplotypeScore=129.4357;InbreedingCoeff=0.1661;MQ=67.18;MQ0=6;MQRankSum=-8.578;QD=5.15;ReadPosRankSum=-1.207;VQSLOD=-0.0257;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:23:4.36:19,0,4	0/0:7,0:7:0.94:0,1,56	0/0:40,0:25:69:0,69,898	0/0:31,0:25:69.15:0,69,956	1/1:13,0:14:8.45:21,8,0	0/1:17,0:17:21.27:23,0,21	1/1:20,0:20:22.23:61,22,0	0/1:16,2:18:88.09:157,0,88	0/1:9,4:13:9.45:117,0,9	0/0:17,0:17:46.56:0,47,508	0/0:14,0:14:17.17:0,17,410	0/1:13,1:14:14.18:97,0,14	0/1:14,3:17:8.45:178,0,8	1/1:16,0:14:12.41:86,12,0	0/0:24,0:24:67.97:0,68,833	1/1:20,0:20:4.14:38,4,0	1/1:8,0:9:6.70:15,7,0	0/0:12,0:12:3.78:0,4,59	0/1:11,1:11:6.25:87,0,6	0/1:10,0:10:9.92:97,0,10	1/1:36,2:38:4.71:402,5,0	0/0:15,0:15:44.68:0,45,583	0/0:22,0:22:62.69:0,63,847	0/0:25,0:25:67.47:0,67,804	0/1:13,0:13:4.20:15,0,4	0/1:11,1:11:17.67:18,0,70	0/1:15,2:17:17.87:149,0,18	1/1:4,1:5:8.98:83,9,0
chr10	8359134	.	G	GT	1606.16	PASS	AB=0.778;AC=17;AF=0.304;AN=56;BaseQRankSum=9.165;DP=491;FS=1.477;HRun=2;HaplotypeScore=128.9696;InbreedingCoeff=0.8955;MQ=74.16;MQ0=8;MQRankSum=-9.686;QD=12.08;ReadPosRankSum=1.613;VQSLOD=2.4672;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:20,9:28:53.53:367,54,0	0/1:5,2:7:1.60:65,0,2	0/0:31,1:21:48.02:0,48,524	0/0:30,0:27:34.78:0,35,553	1/1:3,7:10:15.94:110,16,0	1/1:7,11:18:41.34:307,41,0	1/1:4,15:19:44.34:295,44,0	0/0:21,0:21:37.21:0,37,383	0/0:12,0:12:23.01:0,23,200	0/0:17,0:17:51:0,51,514	0/0:14,0:14:36.09:0,36,394	0/0:14,0:14:18:0,18,189	0/0:16,0:16:38.21:0,38,296	0/0:16,0:14:8.54:0,9,116	0/0:22,0:22:66.12:0,66,727	1/1:7,10:17:31.75:218,32,0	1/1:1,4:10:13.25:86,13,0	1/1:8,2:10:10.75:121,11,0	0/0:19,0:18:39.80:0,40,330	0/0:8,0:8:6.63:0,7,92	0/0:37,0:36:38.19:0,38,417	0/0:16,0:16:44.47:0,44,497	0/0:20,0:20:54.14:0,54,608	0/0:27,0:27:67.04:0,67,676	1/1:5,8:13:32.37:240,32,0	0/0:12,0:11:23.75:0,24,196	0/0:20,0:20:37.55:0,38,322	0/0:3,0:3:5.98:0,6,46
chr10	8359180	.	A	AGT	2060.05	PASS	AB=0.781;AC=31;AF=0.646;AN=48;BaseQRankSum=-1.945;DP=581;FS=2.481;HRun=0;HaplotypeScore=140.3619;InbreedingCoeff=0.0629;MQ=73.15;MQ0=13;MQRankSum=-0.760;QD=5.02;ReadPosRankSum=0.056;VQSLOD=2.8788;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:24:2.13:5,2,0	./.	./.	./.	0/1:12,0:12:0.01:0,0,0	1/1:26,0:23:5.15:73,5,0	1/1:28,0:28:3.74:25,4,0	1/1:26,0:25:6.08:50,6,0	0/1:16,3:19:43.99:150,0,44	0/0:15,0:13:5.64:0,6,39	0/0:17,0:17:15.02:0,15,154	0/1:12,6:19:99:112,0,107	1/1:11,2:13:18.05:243,18,0	0/1:11,11:25:32.05:323,0,32	0/0:34,0:34:54.13:0,54,576	1/1:25,0:22:2.61:26,3,0	1/1:14,0:14:3.46:27,3,0	1/1:11,0:11:6:52,6,0	1/1:8,7:16:15.05:214,15,0	0/1:6,6:12:20.46:122,0,20	1/1:49,0:46:12.95:174,13,0	./.	0/0:16,0:16:11.86:0,12,111	0/1:19,1:21:26.80:27,0,108	1/1:15,0:15:3.47:26,3,0	0/1:13,5:17:41.98:116,0,42	0/1:16,8:24:8.95:242,0,9	0/1:4,6:10:14.45:205,0,14
chr10	8360522	.	ATG	A	2159.59	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=15.830;DP=902;FS=5.444;HRun=0;HaplotypeScore=225.0873;InbreedingCoeff=0.6931;MQ=56.73;MQ0=14;MQRankSum=-0.263;QD=8.24;ReadPosRankSum=3.404;VQSLOD=3.0378;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,147,2366	0/0:17,0:17:42.14:0,42,678	0/0:44,0:15:20.18:0,20,164	0/0:36,0:9:8.22:0,8,74	0/0:28,0:28:22.39:0,22,955	0/0:23,0:23:40.20:0,40,865	0/0:34,0:34:84.24:0,84,1277	0/0:41,0:39:33.63:0,34,945	0/0:29,1:30:42.61:0,43,1183	0/1:41,0:41:5.89:317,0,6	0/1:21,0:21:4.79:188,0,5	0/0:40,0:40:99:0,117,1826	0/0:22,0:22:60.18:0,60,954	0/0:39,2:41:99:0,108,1750	0/1:48,0:48:29.95:363,0,30	0/0:34,0:34:84.21:0,84,1250	0/0:23,0:23:60.18:0,60,949	0/0:23,0:23:12.09:0,12,747	0/0:13,0:13:36.10:0,36,533	0/0:28,1:29:39.63:0,40,1124	1/1:65,0:65:39.90:474,40,0	1/1:22,0:22:44.56:277,45,0	1/1:28,0:28:29.68:261,30,0	1/1:37,0:37:58.22:453,58,0	0/0:35,0:35:96.33:0,96,1554	0/0:41,0:41:99:0,102,1822	0/0:16,1:17:9.59:0,10,710	0/0:14,0:14:39.12:0,39,609
chr10	8360533	.	TGC	T	6926.89	PASS	AB=0.932;AC=18;AF=0.321;AN=56;BaseQRankSum=3.256;DP=868;FS=5.683;HRun=0;HaplotypeScore=211.0021;InbreedingCoeff=0.6376;MQ=58.41;MQ0=8;MQRankSum=-0.206;QD=19.03;ReadPosRankSum=0.959;VQSLOD=4.6637;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:59,0:59:19.44:0,19,1042	0/0:17,0:17:20.47:0,20,305	0/0:33,0:11:9.01:0,9,100	0/0:25,0:4:2.64:0,3,57	0/1:23,3:26:78.13:78,0,400	0/1:22,1:23:48.36:48,0,367	0/1:35,2:37:35.80:36,0,486	0/0:27,0:27:48.34:0,48,870	0/0:30,0:30:64.33:0,64,1191	1/1:2,33:37:97.70:1259,98,0	1/1:2,18:20:39.13:544,39,0	0/0:44,0:44:99:0,123,1992	0/0:24,0:24:66.13:0,66,1069	0/0:45,0:45:99:0,120,1948	1/1:5,38:45:81.27:1131,81,0	0/0:31,0:31:25.42:0,25,500	0/0:21,0:21:38.14:0,38,452	0/1:22,2:24:89.43:89,0,314	0/0:14,0:14:36.03:0,36,557	0/0:28,0:28:59.42:0,59,1120	1/1:3,59:63:95.78:1312,96,0	1/1:1,23:24:45.49:629,45,0	1/1:1,28:29:48.16:670,48,0	1/1:1,35:36:81.27:1130,81,0	0/0:35,0:35:52.89:0,53,706	0/0:41,1:42:75.39:0,75,1874	0/0:17,0:17:32.49:0,32,800	0/0:12,0:12:36.12:0,36,627
chr10	8361215	.	CT	C	15342.38	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=17.251;DP=698;FS=5.582;HRun=4;HaplotypeScore=84.6808;InbreedingCoeff=1.0000;MQ=84.95;MQ0=1;MQRankSum=-2.877;QD=38.74;ReadPosRankSum=4.713;VQSLOD=3.8817;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,32:32:90.30:1258,90,0	1/1:0,22:22:63.21:879,63,0	0/0:24,0:24:69.18:0,69,1012	0/0:21,0:21:60.19:0,60,901	1/1:0,30:30:84.28:1169,84,0	1/1:0,35:35:99:1385,99,0	1/1:0,29:28:72.24:1007,72,0	0/0:33,0:33:99:0,99,1533	0/0:30,0:30:90.31:0,90,1420	1/1:0,25:25:75.25:1047,75,0	1/1:0,28:28:81.27:1131,81,0	0/0:22,0:22:66.21:0,66,1033	0/0:25,0:25:75.26:0,75,1192	0/0:27,0:27:81.26:0,81,1244	1/1:0,27:27:75.04:1048,75,0	1/1:0,20:20:51.17:713,51,0	1/1:0,12:12:33.11:462,33,0	1/1:1,19:20:57.06:770,57,0	0/0:20,0:20:60.19:0,60,910	0/0:25,0:25:75.24:0,75,1166	1/1:0,15:15:39.13:544,39,0	1/1:0,23:23:66.22:916,66,0	1/1:0,25:25:72.24:1006,72,0	1/1:0,27:27:69.23:958,69,0	1/1:0,25:25:75.25:1048,75,0	0/0:33,0:33:96.33:0,96,1534	0/0:24,0:23:72.25:0,72,1143	0/0:18,0:18:54.18:0,54,863
chr10	8361874	.	TA	T	686.17	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.610;DP=706;FS=1.821;HRun=3;HaplotypeScore=65.7802;InbreedingCoeff=0.9993;MQ=83.83;MQ0=0;MQRankSum=-2.436;QD=29.83;ReadPosRankSum=-0.293;VQSLOD=2.9481;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:38:99:0,114,1600	0/0:10,0:10:30.10:0,30,432	0/0:19,0:19:51.17:0,51,726	0/0:23,0:23:59.64:0,60,790	0/0:36,0:36:99:0,105,1473	0/0:19,0:19:57.19:0,57,820	0/0:22,0:22:66.21:0,66,932	0/0:27,0:27:75.24:0,75,1064	0/0:22,0:22:63.19:0,63,888	0/0:32,0:32:96.32:0,96,1380	0/0:24,0:24:72.24:0,72,1036	0/0:16,0:16:48.16:0,48,690	0/0:28,0:28:78.26:0,78,1121	0/0:33,0:33:99:0,99,1387	0/0:36,0:36:99:0,105,1512	0/0:35,0:35:99:0,102,1469	0/0:24,0:24:72.23:0,72,1017	0/0:15,0:14:45.15:0,45,637	0/0:18,0:18:48.16:0,48,691	0/0:30,0:30:84.28:0,84,1198	1/1:0,23:23:63.20:781,63,0	0/0:32,0:32:87.29:0,87,1253	0/0:20,0:20:57.19:0,57,821	0/0:26,0:26:78.21:0,78,1083	0/0:27,0:27:78.21:0,78,1065	0/0:34,0:34:96.31:0,96,1350	0/0:23,0:23:69.22:0,69,976	0/0:13,0:13:36.12:0,36,518
chr10	8362063	.	TTC	T	15387.54	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=14.173;DP=669;FS=5.361;HRun=0;HaplotypeScore=82.8805;InbreedingCoeff=0.9996;MQ=80.31;MQ0=0;MQRankSum=-1.854;QD=39.86;ReadPosRankSum=6.296;VQSLOD=6.8392;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,42:44:99:1647,108,0	1/1:0,9:9:27.09:413,27,0	0/0:15,0:15:33.12:0,33,732	0/0:25,0:25:53.60:0,54,1075	1/1:0,22:22:57.19:872,57,0	1/1:0,19:19:45.15:689,45,0	1/1:0,22:22:57.19:873,57,0	0/0:39,0:39:99:0,117,2223	0/0:24,0:24:72.23:0,72,1323	1/1:0,22:22:66.20:969,66,0	1/1:1,28:29:78.21:1152,78,0	0/0:21,0:21:63.20:0,63,1184	0/0:17,0:17:51.16:0,51,952	0/0:17,0:17:51.17:0,51,968	1/1:0,41:41:99:1745,114,0	1/1:0,38:38:99:1583,105,0	1/1:1,24:25:63.21:965,63,0	1/1:0,13:13:39.13:597,39,0	0/0:26,0:26:78.27:0,78,1474	0/0:29,0:27:72.25:0,72,1381	1/1:2,16:18:33.11:505,33,0	1/1:1,22:23:66.21:989,66,0	1/1:0,19:19:39.13:597,39,0	1/1:1,22:23:60.20:918,60,0	1/1:0,19:19:57.19:873,57,0	0/0:37,1:38:88.58:0,89,2075	0/0:23,0:23:69.24:0,69,1299	0/0:9,0:9:27.07:0,27,486
chr10	8362305	.	C	CA	8505.84	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=-0.390;DP=533;FS=9.645;HRun=8;HaplotypeScore=102.8909;InbreedingCoeff=0.9890;MQ=65.10;MQ0=0;MQRankSum=-6.212;QD=27.09;ReadPosRankSum=0.879;VQSLOD=4.2827;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,28:31:81.24:929,81,0	1/1:3,4:7:15.04:166,15,0	0/0:11,0:11:32.95:0,33,284	0/0:16,0:16:21.72:0,22,198	1/1:8,17:26:53.95:580,54,0	1/1:3,12:15:36.11:415,36,0	1/1:4,18:22:57.09:628,57,0	0/0:23,0:22:51.02:0,51,463	0/0:23,0:23:60.02:0,60,549	1/1:4,11:15:39.12:448,39,0	1/1:9,12:21:44.30:473,44,0	0/0:22,0:22:60.01:0,60,549	0/0:19,0:19:42:0,42,384	0/0:15,0:15:36.01:0,36,329	1/1:4,19:23:57.17:658,57,0	1/1:2,25:27:75.22:865,75,0	1/1:4,16:20:45.13:519,45,0	1/1:0,14:14:42.12:485,42,0	0/0:14,0:14:39.01:0,39,356	0/0:22,0:22:44.98:0,45,402	1/1:2,0:15:31.25:159,31,0	1/1:2,18:20:60.05:648,60,0	1/1:4,17:21:57.08:617,57,0	1/1:5,18:23:45.13:519,45,0	1/1:3,10:13:36.06:397,36,0	0/0:23,0:23:66.03:0,66,600	0/0:25,0:25:69.02:0,69,632	0/0:6,0:6:9:0,9,82
chr10	8362359	.	TGCCATTAAGAAATG	T	22647.75	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=14.519;DP=462;FS=11.875;HRun=0;HaplotypeScore=216.7788;InbreedingCoeff=0.9928;MQ=72.13;MQ0=0;MQRankSum=-15.593;QD=94.37;ReadPosRankSum=1.362;VQSLOD=3.7211;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,11:18:36.10:1369,36,0	1/1:1,5:6:15.05:640,15,0	0/0:18,0:18:42.14:0,42,1791	0/0:13,0:11:29.12:0,29,1329	1/1:3,19:24:56.81:2372,57,0	1/1:3,12:15:33.11:1408,33,0	1/1:3,12:15:36.12:1522,36,0	0/0:26,0:26:57.20:0,57,3540	0/0:21,0:21:63.22:0,63,4074	1/1:2,11:13:33.11:1408,33,0	1/1:2,16:20:54.19:2298,54,0	0/0:15,0:15:45.15:0,45,3156	0/0:20,0:20:60.21:0,60,3948	0/0:18,0:18:39.01:0,39,2656	1/1:3,12:15:36.12:1536,36,0	1/1:9,12:21:42.13:1629,42,0	1/1:6,12:18:33.11:1408,33,0	1/1:2,11:13:36.12:1304,36,0	0/0:15,0:15:45.15:0,45,2638	0/0:24,0:24:72.25:0,72,4802	1/1:3,6:8:12.04:511,12,0	1/1:3,9:12:33.08:1137,33,0	1/1:3,12:15:39.13:1547,39,0	1/1:2,12:14:26.92:1151,27,0	1/1:0,11:11:33.11:1408,33,0	0/0:17,0:17:48.16:0,48,3102	0/0:25,0:25:75.26:0,75,5189	0/0:10,0:10:27.09:0,27,1909
chr10	8362361	.	CCATTAAGAAATGG	C	15555.70	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=16.482;DP=415;FS=12.900;HRun=0;HaplotypeScore=212.7906;InbreedingCoeff=0.9927;MQ=73.03;MQ0=0;MQRankSum=-16.045;QD=78.96;ReadPosRankSum=1.962;VQSLOD=3.1293;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:12,0:13:33.11:919,33,0	1/1:5,0:5:15.05:446,15,0	0/0:16,0:16:42.14:0,42,1587	0/0:13,0:12:29.26:0,29,1272	1/1:19,2:21:57.19:1641,57,0	1/1:12,0:12:33.11:980,33,0	1/1:12,0:12:36.12:1056,36,0	0/0:21,0:21:57.20:0,57,3398	0/0:21,0:21:63.22:0,63,3784	1/1:11,0:11:33.11:980,33,0	1/1:17,2:19:54.19:1613,54,0	0/0:15,0:15:45.15:0,45,2949	0/0:20,0:20:60.21:0,60,3684	0/0:18,0:18:39.09:0,39,2473	1/1:12,0:12:36.12:1069,36,0	1/1:14,0:14:39.13:1099,39,0	1/1:13,0:13:33.11:980,33,0	1/1:12,0:12:30.65:838,31,0	0/0:16,0:16:48.13:0,48,2485	0/0:24,0:24:72.25:0,72,4466	1/1:6,0:5:12.04:356,12,0	1/1:11,0:11:27.08:739,27,0	1/1:13,0:13:39.13:1058,39,0	1/1:12,0:12:27.09:802,27,0	1/1:11,0:11:33.11:980,33,0	0/0:17,0:17:48.16:0,48,2902	0/0:26,0:26:78.27:0,78,4989	0/0:10,0:10:27.09:0,27,1792
chr10	8363088	.	CT	C	2515.97	PASS	AB=0.946;AC=14;AF=0.250;AN=56;BaseQRankSum=7.011;DP=588;FS=4.307;HRun=9;HaplotypeScore=68.6412;InbreedingCoeff=0.8397;MQ=73.46;MQ0=0;MQRankSum=4.003;QD=16.03;ReadPosRankSum=1.115;VQSLOD=3.9471;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,126,1386	0/0:10,0:10:30.07:0,30,336	0/1:18,1:18:14.15:14,0,210	0/1:15,1:16:2.36:2,0,169	0/0:25,0:25:72.21:0,72,827	0/0:19,0:20:53.97:0,54,584	0/0:26,0:25:72.09:0,72,785	0/0:24,0:24:57.16:0,57,648	0/0:19,0:19:51.11:0,51,564	1/1:4,25:29:75.04:686,75,0	1/1:3,19:22:54.02:493,54,0	0/0:23,0:23:63.14:0,63,709	0/0:15,0:15:42.12:0,42,485	0/0:16,0:16:39.11:0,39,448	1/1:4,12:16:33.01:302,33,0	0/0:10,0:10:27.04:0,27,297	0/0:27,0:26:60.18:0,60,689	0/0:14,0:14:36.11:0,36,412	0/0:25,0:25:66.16:0,66,732	0/0:23,0:23:63.08:0,63,708	0/0:23,0:23:60.18:0,60,692	1/1:2,16:18:42.02:384,42,0	1/1:3,9:12:27.01:247,27,0	1/1:2,23:25:63.03:576,63,0	0/0:24,0:24:60.16:0,60,681	0/0:32,0:32:87.25:0,87,995	0/0:21,0:21:63.17:0,63,711	0/0:7,0:7:12.51:0,13,139
chr10	8363150	.	G	GGTGT	1429.23	PASS	AB=0.986;AC=33;AF=0.786;AN=42;BaseQRankSum=-0.432;DP=463;FS=7.543;HRun=0;HaplotypeScore=110.6940;InbreedingCoeff=0.2176;MQ=60.13;MQ0=19;MQRankSum=0.478;QD=4.64;ReadPosRankSum=-0.569;VQSLOD=1.6680;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	1/1:16,0:15:2.98:22,3,0	1/1:21,0:20:8.99:75,9,0	0/1:24,0:20:0.08:0,0,0	1/1:19,0:18:2.97:20,3,0	1/1:12,4:16:8.92:155,9,0	1/1:18,0:17:5.99:48,6,0	1/1:12,0:11:2.04:6,2,0	0/1:22,1:23:35.43:205,0,35	1/1:8,0:10:2.74:12,3,0	1/1:9,6:17:3.01:70,3,0	1/1:16,0:16:7.82:78,8,0	0/0:4,0:4:0:0,0,0	./.	0/0:9,0:9:0:0,0,0	0/1:20,0:18:0:0,0,0	./.	0/0:14,0:13:0.47:0,0,1	1/1:16,0:14:6.45:49,6,0	1/1:18,0:17:14.04:162,14,0	1/1:16,0:15:2.59:69,3,0	./.	1/1:24,0:24:18.02:240,18,0	1/1:13,2:14:5.71:155,6,0	1/1:6,0:5:11.98:148,12,0
chr10	8363188	.	T	TGCGCGCGCGCGC	854.14	PASS	AB=0.944;AC=14;AF=0.269;AN=52;BaseQRankSum=3.724;DP=352;FS=3.679;HRun=0;HaplotypeScore=120.6703;InbreedingCoeff=0.1397;MQ=39.23;MQ0=31;MQRankSum=-3.493;QD=5.55;ReadPosRankSum=-2.146;VQSLOD=2.0941;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:5.93:0,6,41	./.	1/1:18,0:1:3.01:32,3,0	0/1:32,0:5:53.78:54,0,160	1/1:9,0:7:1.25:3,1,0	0/1:8,6:14:17.95:175,0,18	1/1:22,0:19:2.24:6,2,0	0/0:7,0:6:15.03:0,15,352	0/0:10,0:9:6.02:0,6,102	0/1:13,0:11:99:185,0,105	0/0:6,0:4:6.02:0,6,126	0/0:15,0:15:21.07:0,21,515	0/0:14,0:14:21.07:0,21,497	0/0:16,0:15:6.09:0,6,65	0/0:8,0:8:12:0,12,298	0/0:6,0:6:1.63:0,2,6	0/1:9,0:9:16.90:126,0,17	1/1:6,0:6:15.01:383,15,0	0/0:13,0:11:5.08:0,5,668	0/0:11,0:11:9.79:0,10,215	0/0:12,0:11:5.20:0,5,115	0/0:11,0:9:5.90:0,6,213	0/0:11,0:10:9.03:0,9,195	0/1:9,0:8:8.94:9,0,129	./.	0/1:19,0:17:22.22:22,0,1116	0/0:15,0:14:25.06:0,25,609	0/0:9,0:7:15.05:0,15,436
chr10	8363190	.	T	TGCGCGCGCGCGCGT	942.05	PASS	AB=1.000;AC=16;AF=0.308;AN=52;BaseQRankSum=3.108;DP=333;FS=5.589;HRun=0;HaplotypeScore=123.6545;InbreedingCoeff=0.2849;MQ=38.85;MQ0=29;MQRankSum=-2.831;QD=6.45;ReadPosRankSum=-1.690;VQSLOD=1.1513;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:6,1:13:0:0,0,0	./.	1/1:19,0:1:3.01:32,3,0	0/1:29,0:5:53.80:54,0,160	1/1:5,0:6:1.24:3,1,0	1/1:13,0:11:3.01:161,3,0	1/1:9,0:16:2.03:5,2,0	0/0:7,0:6:11.87:0,12,313	0/0:10,0:9:6.02:0,6,96	0/1:13,0:11:55.81:246,0,56	0/0:6,0:4:6.01:0,6,76	0/0:15,0:15:18.93:0,19,449	0/0:14,0:14:7.58:0,8,408	0/0:16,0:15:3.48:0,3,50	0/0:8,0:8:9.03:0,9,233	0/0:5,0:5:2.22:0,2,7	1/1:8,0:8:5.98:136,6,0	1/1:6,0:6:12.04:415,12,0	0/1:13,0:11:5.78:6,0,664	0/0:11,0:11:6.01:0,6,109	0/0:12,0:11:5.97:0,6,71	0/0:11,0:9:5.74:0,6,188	0/0:11,0:10:8.96:0,9,152	0/0:9,0:8:2.08:0,2,98	./.	0/1:18,0:16:25.23:25,0,944	0/0:15,0:14:23.97:0,24,576	0/0:9,0:7:15.05:0,15,401
chr10	8363192	.	T	TGCGCGCGCGCGC	962.41	PASS	AB=1.000;AC=14;AF=0.250;AN=56;BaseQRankSum=1.322;DP=320;FS=1.259;HRun=0;HaplotypeScore=127.2974;InbreedingCoeff=0.1302;MQ=40.88;MQ0=28;MQRankSum=-2.573;QD=6.68;ReadPosRankSum=-0.010;VQSLOD=2.5807;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:8:1.17:0,1,3	1/1:4,0:4:0.12:1,0,0	0/1:20,0:2:0.86:14,0,1	0/1:28,0:5:53.71:54,0,177	0/0:9,0:7:0.74:0,1,8	0/1:14,0:12:8.17:175,0,8	0/1:12,0:10:0.10:1,0,0	0/0:7,0:6:15.05:0,15,407	0/0:10,0:9:6.02:0,6,91	0/1:13,0:11:9.94:328,0,10	0/0:7,0:5:7.74:0,8,41	0/0:15,0:15:18.01:0,18,404	0/0:14,0:14:18.45:0,18,367	0/0:15,0:14:3.35:0,3,48	0/0:8,1:9:11.40:0,11,165	0/0:5,0:5:3.01:0,3,108	1/1:7,0:7:3.01:125,3,0	1/1:5,0:5:9.03:314,9,0	0/1:14,0:12:5.80:6,0,652	0/0:9,0:9:6:0,6,64	0/0:12,0:11:2.99:0,3,26	0/0:11,1:10:8.40:0,8,158	0/0:9,2:10:5.96:0,6,98	0/1:9,0:8:8.95:9,0,59	0/0:10,0:9:2.50:0,2,9	0/1:18,0:16:70.53:71,0,952	0/0:14,0:13:20.77:0,21,682	0/0:9,0:7:15.05:0,15,337
chr10	8363199	.	GCA	G	85.70	PASS	AB=0.984;AC=14;AF=0.280;AN=50;BaseQRankSum=0.775;DP=278;FS=13.259;HRun=0;HaplotypeScore=59.2813;InbreedingCoeff=0.1017;MQ=43.82;MQ0=23;MQRankSum=2.645;QD=0.83;ReadPosRankSum=-2.645;VQSLOD=-0.4463;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:5,0:5:4.22:4,0,11	./.	0/1:21,0:2:14.28:22,0,14	0/0:29,0:6:11.97:0,12,108	0/0:9,0:7:2.85:0,3,17	0/0:13,0:11:7.28:0,7,28	./.	0/0:7,0:6:15.05:0,15,217	0/0:8,0:7:5.93:0,6,59	0/1:10,0:9:13.40:13,0,17	0/0:5,0:4:2.74:0,3,12	0/1:12,2:14:27.77:28,0,99	0/0:11,0:11:15.01:0,15,173	0/0:12,0:12:2.88:0,3,42	1/1:7,1:8:5.99:48,6,0	0/0:4,0:4:3.01:0,3,37	1/1:5,0:5:0.89:2,1,0	0/0:3,0:3:5.54:0,6,25	0/0:14,0:12:17.92:0,18,335	./.	0/1:7,0:6:0:0,0,0	0/1:9,0:8:0:0,0,0	0/1:10,0:9:12.89:29,0,13	1/1:5,1:5:2.71:20,3,0	0/0:9,0:9:4.44:0,4,14	0/0:13,0:12:27.92:0,28,385	0/0:15,0:14:27.06:0,27,348	0/1:8,0:7:45.08:45,0,120
chr10	8363200	.	C	CGCGCGCGCGCGTGCGTGT	1685.44	PASS	AB=1.000;AC=20;AF=0.435;AN=46;BaseQRankSum=-1.106;DP=282;FS=4.653;HRun=0;HaplotypeScore=142.8755;InbreedingCoeff=0.2684;MQ=43.65;MQ0=21;MQRankSum=0.041;QD=11.70;ReadPosRankSum=-1.591;VQSLOD=1.5843;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/0:4,0:4:1.68:0,2,5	0/0:21,0:2:1.57:0,2,13	0/1:29,0:6:59.60:60,0,214	1/1:9,0:7:1.24:3,1,0	0/1:13,0:12:0.14:187,0,0	0/0:12,0:10:2.50:0,2,9	0/0:7,0:6:12.04:0,12,516	0/0:7,0:7:6.02:0,6,129	1/1:0,6:12:8.26:574,8,0	./.	0/0:14,0:14:16.05:0,16,376	0/0:9,0:9:12.04:0,12,440	0/0:12,0:12:3.32:0,3,89	1/1:6,0:6:6.01:68,6,0	0/0:4,0:4:3.01:0,3,145	1/1:0,0:8:3.01:121,3,0	1/1:1,0:6:9.03:529,9,0	0/1:14,0:12:5.83:6,0,835	./.	./.	0/1:8,0:7:0:0,0,0	1/1:10,0:9:5.95:59,6,0	1/1:1,2:7:3.01:45,3,0	./.	0/1:12,0:11:99:130,0,973	0/0:15,0:14:25.76:0,26,1023	0/1:8,0:7:43.21:43,0,140
chr10	8364276	.	AC	A	12701.72	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=7.827;DP=689;FS=0.295;HRun=3;HaplotypeScore=75.4522;InbreedingCoeff=0.9948;MQ=53.25;MQ0=5;MQRankSum=1.683;QD=31.36;ReadPosRankSum=5.804;VQSLOD=4.5895;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,42:45:99:1375,114,0	1/1:0,8:8:21.07:260,21,0	0/0:19,0:14:42.10:0,42,520	0/0:15,0:11:32.54:0,33,378	1/1:0,18:18:42:467,42,0	1/1:0,27:27:69.10:815,69,0	1/1:0,23:23:57.18:705,57,0	0/0:37,0:36:96.26:0,96,1259	0/0:16,0:16:48.01:0,48,633	1/1:0,34:34:99:1221,99,0	1/1:1,19:20:57.18:705,57,0	0/0:17,0:17:50.94:0,51,641	0/0:29,0:29:87.27:0,87,1222	0/0:25,0:25:72.22:0,72,1014	1/1:1,35:36:84.26:1038,84,0	1/1:1,28:29:75.24:927,75,0	1/1:0,26:26:72.17:872,72,0	1/1:2,18:20:11.89:589,12,0	0/0:26,0:22:47.52:0,48,654	0/0:34,0:34:96.20:0,96,1320	1/1:3,28:31:66.21:817,66,0	1/1:2,13:15:42.13:516,42,0	1/1:0,23:23:63.16:763,63,0	1/1:1,21:22:57.18:705,57,0	1/1:1,27:28:75.23:926,75,0	0/0:23,1:24:28.81:0,29,818	0/0:25,0:25:75.03:0,75,978	0/0:17,0:16:45.13:0,45,627
chr10	8364462	.	TAC	T	5189.66	PASS	AC=48;AF=0.960;AN=50;BaseQRankSum=1.420;DP=181;FS=0.000;HRun=0;HaplotypeScore=206.0109;InbreedingCoeff=0.2593;MQ=34.05;MQ0=2;MQRankSum=-1.535;QD=29.49;ReadPosRankSum=2.183;VQSLOD=5.6725;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,5:5:6.02:85,6,0	1/1:3,2:5:15.04:188,15,0	./.	0/0:3,0:1:3.01:0,3,46	1/1:1,4:5:3.01:41,3,0	1/1:1,4:5:6.02:77,6,0	1/1:2,5:6:5.80:121,6,0	./.	1/1:2,2:4:6.02:82,6,0	1/1:4,2:6:18.06:254,18,0	1/1:4,1:5:12.04:163,12,0	1/1:6,4:10:24.08:331,24,0	1/1:9,4:13:27.09:367,27,0	1/1:4,4:8:18.06:250,18,0	1/1:10,3:13:36.12:492,36,0	1/1:6,4:10:27.09:375,27,0	1/1:1,3:4:3.01:43,3,0	1/1:0,6:4:9.03:128,9,0	1/1:4,3:7:21.07:297,21,0	1/1:8,4:12:24.08:329,24,0	./.	1/1:2,5:6:6.02:83,6,0	1/1:1,3:4:2.68:11,3,0	1/1:0,2:2:3.01:43,3,0	1/1:10,2:11:30.08:384,30,0	1/1:3,2:5:15.05:211,15,0	1/1:8,6:14:39.13:540,39,0	1/1:5,2:7:21.07:293,21,0
chr10	8364465	.	A	ATGG	7621.66	PASS	AC=48;AF=0.960;AN=50;BaseQRankSum=1.652;DP=185;FS=0.000;HRun=0;HaplotypeScore=197.1755;InbreedingCoeff=0.2650;MQ=33.68;MQ0=6;MQRankSum=-1.732;QD=43.30;ReadPosRankSum=1.652;VQSLOD=5.5705;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,0:5:6.02:85,6,0	1/1:2,2:5:15.05:266,15,0	./.	0/0:5,0:1:3.01:0,3,56	1/1:4,1:5:3.01:70,3,0	1/1:4,1:5:6.02:105,6,0	1/1:5,2:6:11.95:170,12,0	./.	1/1:2,2:4:6.02:137,6,0	1/1:2,4:6:18.06:339,18,0	1/1:1,4:5:12.04:278,12,0	1/1:4,6:10:24.08:492,24,0	1/1:4,9:13:27.09:613,27,0	1/1:4,4:8:18.06:360,18,0	1/1:3,10:13:36.12:766,36,0	1/1:4,6:10:27.09:538,27,0	1/1:3,1:4:3.01:58,3,0	1/1:6,0:4:9.03:128,9,0	1/1:3,4:7:21.07:387,21,0	1/1:4,8:12:24.08:548,24,0	./.	1/1:5,2:6:6.02:127,6,0	1/1:4,0:4:2.90:16,3,0	1/1:2,0:2:3.01:43,3,0	1/1:2,9:11:30.10:645,30,0	1/1:2,3:5:15.05:281,15,0	1/1:6,8:14:39.13:751,39,0	1/1:2,5:7:21.07:419,21,0
chr10	8364468	.	TG	T	936.21	PASS	AB=0.643;AC=32;AF=0.640;AN=50;BaseQRankSum=8.387;DP=187;FS=0.000;HRun=3;HaplotypeScore=220.7417;InbreedingCoeff=-0.0854;MQ=33.50;MQ0=9;MQRankSum=0.438;QD=5.71;ReadPosRankSum=7.278;VQSLOD=-0.0248;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:5:3:0,3,29	0/1:2,3:5:17.49:27,0,17	./.	0/0:6,0:1:3.01:0,3,39	1/1:4,1:5:2.84:14,3,0	1/1:4,1:5:2.84:14,3,0	0/1:5,2:6:4.36:4,0,49	./.	1/1:2,2:4:5.72:29,6,0	0/1:2,4:6:25.78:45,0,26	1/1:1,4:5:11.36:56,11,0	0/1:4,6:10:33.43:65,0,33	1/1:4,9:13:25.57:129,26,0	0/1:4,4:8:38.37:40,0,38	1/1:3,10:13:2.87:116,3,0	0/1:4,6:10:57.85:61,0,58	1/1:4,0:4:0.89:2,1,0	0/0:6,0:4:9.01:0,9,87	0/1:4,4:7:41.46:41,0,67	1/1:4,8:12:22.86:116,23,0	./.	1/1:5,2:6:3.73:17,4,0	1/1:3,0:4:2.04:6,2,0	0/0:2,0:2:3:0,3,28	1/1:2,10:12:27.66:132,28,0	0/1:2,3:5:31.46:31,0,43	0/1:6,8:14:81.97:82,0,104	0/1:2,5:7:37.70:54,0,38
chr10	8364473	.	T	TCCCCAGGTA	20387.31	PASS	AB=0.704;AC=42;AF=0.875;AN=48;BaseQRankSum=-2.297;DP=273;FS=0.000;HRun=0;HaplotypeScore=379.9514;InbreedingCoeff=0.1014;MQ=31.69;MQ0=13;MQRankSum=-0.053;QD=79.33;ReadPosRankSum=8.113;VQSLOD=3.8696;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,0:7:11.87:380,12,0	1/1:5,3:8:15.39:667,15,0	./.	./.	1/1:9,1:10:6.87:395,7,0	1/1:8,1:9:10.91:436,11,0	0/1:6,2:7:16.71:314,0,17	./.	1/1:6,2:8:24.06:754,24,0	1/1:10,4:14:8.95:929,9,0	1/1:4,4:8:17.27:662,17,0	1/1:5,6:11:12.14:1035,12,0	1/1:8,9:17:43.56:1904,44,0	0/1:4,4:8:4.27:630,0,4	0/1:9,10:18:2.30:1629,0,2	1/1:6,5:12:27.16:1381,27,0	1/1:6,0:6:12.01:311,12,0	1/1:8,0:6:9.53:355,10,0	1/1:4,4:7:21.07:821,21,0	0/1:10,8:18:2.90:1432,0,3	./.	1/1:8,1:10:0.87:765,1,0	1/1:12,0:11:7.71:567,8,0	0/0:2,0:2:2.98:0,3,21	1/1:7,10:15:7.71:1526,8,0	1/1:7,3:9:24.55:809,25,0	1/1:10,8:18:52.73:1771,53,0	1/1:3,5:8:15.36:914,15,0
chr10	8364922	.	ACACTTTGATCTTCC	A	12171.13	PASS	AC=42;AF=1.000;AN=42;BaseQRankSum=2.790;DP=406;FS=0.000;HRun=0;HaplotypeScore=185.5585;InbreedingCoeff=-0.0569;MQ=18.15;MQ0=252;MQRankSum=1.042;QD=36.55;ReadPosRankSum=2.185;VQSLOD=3.8222;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:33,1:1:3.01:126,3,0	1/1:3,2:3:3.01:126,3,0	./.	./.	1/1:4,7:9:15.05:554,15,0	1/1:12,9:11:29.56:1186,30,0	1/1:13,2:2:3.01:126,3,0	./.	1/1:19,0:6:15.05:555,15,0	1/1:14,3:10:24.08:664,24,0	1/1:5,8:12:20.99:805,21,0	1/1:16,0:3:9.03:239,9,0	1/1:15,0:4:12.04:501,12,0	1/1:17,0:6:18.06:550,18,0	1/1:10,1:3:3.01:125,3,0	1/1:6,6:6:18.06:754,18,0	1/1:17,1:1:3.01:126,3,0	./.	./.	1/1:18,0:16:36.12:1025,36,0	./.	1/1:8,5:6:9.03:309,9,0	1/1:15,9:19:41.60:1417,42,0	./.	1/1:3,8:10:27.09:1018,27,0	1/1:17,0:8:21.07:609,21,0	1/1:22,0:12:31.97:1108,32,0	1/1:4,0:2:6.02:250,6,0
chr10	8364929	.	GATCTTCCTTCT	G	6562.84	PASS	AC=42;AF=1.000;AN=42;DP=391;FS=0.000;HRun=0;HaplotypeScore=188.5221;InbreedingCoeff=-0.0585;MQ=17.15;MQ0=260;QD=20.83;VQSLOD=3.6750;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:35,0:1:3.01:73,3,0	1/1:4,0:2:3.01:73,3,0	./.	./.	1/1:12,0:9:14.97:308,15,0	1/1:19,0:10:28.91:662,29,0	1/1:13,0:2:3.01:73,3,0	./.	1/1:15,4:5:14.88:346,15,0	1/1:16,0:8:18.12:244,18,0	1/1:10,0:8:20.94:455,21,0	1/1:15,1:3:8.60:110,9,0	1/1:11,4:4:12.04:332,12,0	1/1:12,3:6:17.62:292,18,0	1/1:8,0:1:3.01:73,3,0	1/1:13,0:6:18.06:437,18,0	1/1:18,0:1:3.01:73,3,0	./.	./.	1/1:9,5:12:35.01:510,35,0	./.	1/1:16,0:6:7.84:151,8,0	1/1:22,0:16:37.24:691,37,0	./.	1/1:11,0:9:25.89:542,26,0	1/1:13,3:7:20.46:306,20,0	1/1:12,7:10:32.53:643,33,0	1/1:2,2:2:6.02:169,6,0
chr10	8365974	.	GCACACA	G	5255.65	PASS	AB=0.840;AC=30;AF=0.556;AN=54;BaseQRankSum=-3.811;DP=575;FS=4.013;HRun=0;HaplotypeScore=153.9517;InbreedingCoeff=0.7297;MQ=60.83;MQ0=5;MQRankSum=-10.285;QD=17.29;ReadPosRankSum=2.347;VQSLOD=4.2307;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,6:16:6.02:124,6,0	1/1:5,8:14:24.08:474,24,0	./.	0/0:23,0:17:6.02:0,6,170	1/1:11,13:25:21.54:433,22,0	1/1:12,9:22:18.06:351,18,0	0/1:12,6:17:37.48:56,0,37	0/0:26,0:21:12.03:0,12,386	0/0:15,0:23:33.11:0,33,910	1/1:11,5:18:21.05:336,21,0	1/1:4,7:12:18.06:351,18,0	0/0:23,0:30:45.11:0,45,1168	0/0:13,0:21:41.17:0,41,1078	0/0:13,0:24:45.15:0,45,1217	1/1:19,2:21:9.03:184,9,0	1/1:9,10:19:21.07:433,21,0	1/1:7,8:15:9.03:185,9,0	1/1:8,5:14:9.03:166,9,0	0/0:9,0:12:24.08:0,24,686	0/0:27,0:31:41.17:0,41,1030	0/0:20,0:18:6.02:0,6,167	1/1:15,10:27:36.07:660,36,0	1/1:2,10:13:24.08:475,24,0	1/1:11,7:19:15.05:289,15,0	1/1:11,14:30:2.56:725,3,0	0/0:14,0:20:36.12:0,36,1019	0/1:12,0:19:14.83:15,0,563	0/0:6,0:6:6.02:0,6,186
chr10	8366038	.	AAG	A	5038.79	PASS	AB=0.987;AC=21;AF=0.375;AN=56;BaseQRankSum=-9.425;DP=675;FS=9.059;HRun=0;HaplotypeScore=181.7407;InbreedingCoeff=0.8604;MQ=62.18;MQ0=10;MQRankSum=1.361;QD=17.38;ReadPosRankSum=-0.203;VQSLOD=4.1263;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,1:33:49.41:0,49,938	0/0:21,0:21:52.40:0,52,765	0/0:44,1:25:0.36:0,0,331	0/1:75,1:36:30.78:31,0,316	0/0:29,0:28:45.08:0,45,682	0/0:20,0:20:45.03:0,45,615	0/0:28,0:27:57.19:0,57,859	1/1:21,9:30:53.81:615,54,0	1/1:5,11:16:32.85:353,33,0	0/0:22,0:22:42.47:0,42,701	0/0:12,0:12:24.08:0,24,388	1/1:11,19:30:72.18:853,72,0	1/1:8,11:18:45.05:513,45,0	1/1:8,16:24:50.99:597,51,0	0/0:20,1:21:17.50:0,17,713	0/0:21,0:21:45.09:0,45,643	0/0:14,0:14:27.09:0,27,424	0/0:7,0:7:15.05:0,15,243	1/1:13,2:15:17.88:190,18,0	1/1:8,11:18:36.06:409,36,0	0/0:19,0:17:27.09:0,27,408	0/0:21,1:22:30.10:0,30,456	0/0:22,0:22:45.15:0,45,728	0/0:14,0:14:30.04:0,30,393	0/0:34,0:34:57.17:0,57,839	1/1:5,31:36:43.97:938,44,0	1/1:6,14:19:42.12:501,42,0	1/1:4,0:4:3.95:40,4,0
chr10	8366104	.	C	CAGAG	1645.25	PASS	AB=0.946;AC=24;AF=0.444;AN=54;BaseQRankSum=8.747;DP=637;FS=0.000;HRun=0;HaplotypeScore=194.4275;InbreedingCoeff=0.5262;MQ=43.45;MQ0=29;MQRankSum=-0.857;QD=4.84;ReadPosRankSum=-0.081;VQSLOD=2.5492;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:37,0:34:21.34:161,21,0	1/1:20,1:21:27.98:312,28,0	0/0:14,0:2:2.68:0,3,11	0/1:45,0:4:15.51:16,0,16	1/1:16,3:19:5.83:48,6,0	1/1:19,2:21:18.35:208,18,0	0/1:15,0:11:0:0,0,0	0/0:36,0:31:59.85:0,60,776	0/0:24,0:20:27.09:0,27,444	0/1:17,0:18:4.92:181,0,5	0/1:11,0:11:2.09:2,0,8	0/0:30,0:27:42.01:0,42,602	0/0:25,0:21:42.06:0,42,621	0/0:27,0:24:35.42:0,35,541	0/1:27,0:33:15.05:36,0,15	1/1:18,5:22:30.05:442,30,0	0/1:14,1:15:13.94:128,0,14	1/1:15,1:13:7.41:100,7,0	0/0:17,0:15:33.06:0,33,481	0/0:22,0:19:22.17:0,22,344	1/1:15,2:13:2.38:24,2,0	0/0:13,0:15:3.40:0,3,18	1/1:18,0:21:3.18:44,3,0	./.	1/1:24,0:23:15.16:128,15,0	0/0:27,0:28:27.17:0,27,949	0/0:32,0:31:76.33:0,76,1156	0/0:14,0:12:23.81:0,24,333
chr10	8366114	.	GAC	G	672.24	PASS	AB=0.801;AC=9;AF=0.167;AN=54;BaseQRankSum=1.201;DP=600;FS=5.084;HRun=0;HaplotypeScore=179.9951;InbreedingCoeff=0.0796;MQ=41.86;MQ0=31;MQRankSum=0.739;QD=4.28;ReadPosRankSum=-2.296;VQSLOD=2.6318;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:32,0:29:5.80:6,0,107	0/0:20,0:20:41.44:0,41,341	0/0:13,0:2:5.69:0,6,46	0/0:32,0:2:2.28:0,2,19	0/0:17,0:17:0.33:0,0,1	0/0:22,0:22:23.30:0,23,188	0/1:14,0:10:0.03:0,0,0	0/0:37,0:30:86.84:0,87,1273	0/0:26,0:22:36.09:0,36,599	0/1:11,6:17:39.13:330,0,39	0/1:5,6:11:31.22:38,0,31	0/0:27,0:24:51.63:0,52,892	0/0:21,0:17:42.12:0,42,729	0/0:26,0:22:45.59:0,46,738	0/1:16,17:33:67.04:153,0,67	0/0:21,0:20:18.91:0,19,161	0/0:18,0:18:34.85:0,35,296	0/0:17,0:13:2.80:0,3,148	0/0:18,0:16:47.94:0,48,726	0/0:16,0:13:22.32:0,22,403	1/1:14,1:11:2.06:23,2,0	0/1:11,4:15:9.95:110,0,10	0/1:14,6:20:49.82:137,0,50	./.	0/0:25,0:24:24.99:0,25,257	0/0:31,0:30:32.69:0,33,1245	0/0:31,0:30:86.28:0,86,1411	0/0:15,0:13:27.07:0,27,431
chr10	8366128	.	GAC	G	1712.61	PASS	AB=0.960;AC=21;AF=0.389;AN=54;BaseQRankSum=-2.128;DP=569;FS=18.313;HRun=0;HaplotypeScore=172.7135;InbreedingCoeff=-0.3683;MQ=40.50;MQ0=32;MQRankSum=-4.497;QD=4.02;ReadPosRankSum=5.636;VQSLOD=1.4178;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:24:12.69:13,0,218	0/1:13,3:16:25.48:25,0,258	0/0:10,0:2:6:0,6,76	./.	0/1:12,1:13:0.09:0,0,0	0/1:19,5:24:72.56:73,0,205	0/0:11,1:10:2.97:0,3,26	0/1:42,0:35:99:323,0,119	0/1:25,0:21:27.69:93,0,28	0/1:16,0:15:76.10:76,0,105	0/0:8,0:7:3.01:0,3,54	0/1:22,0:19:56.35:57,0,56	0/1:24,0:20:34.29:113,0,34	0/1:27,0:23:9.75:94,0,10	0/0:34,0:34:18.82:0,19,314	0/1:18,3:20:99:123,0,142	0/1:21,0:21:15.39:15,0,306	0/1:17,0:13:59.82:60,0,150	0/1:20,0:18:79.82:118,0,80	0/1:21,0:18:46.59:47,0,68	0/0:16,0:13:0.36:0,0,2	0/0:14,0:14:1.90:0,2,111	0/0:14,0:14:8.20:0,8,157	0/0:11,0:11:11.99:0,12,139	0/1:19,4:22:9.72:10,0,192	0/1:23,0:22:99:135,0,106	1/1:30,0:29:60.05:401,60,0	1/1:14,0:11:6.11:86,6,0
chr10	8366130	.	CAG	C	4291.56	PASS	AB=1.000;AC=22;AF=0.407;AN=54;BaseQRankSum=-11.415;DP=564;FS=17.253;HRun=0;HaplotypeScore=163.3814;InbreedingCoeff=0.7835;MQ=40.27;MQ0=33;MQRankSum=-2.498;QD=15.44;ReadPosRankSum=5.551;VQSLOD=3.7459;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:23:23.30:0,23,201	0/0:16,0:16:22.31:0,22,196	0/0:10,0:2:5.97:0,6,68	./.	0/1:13,0:13:0.09:0,0,0	0/0:23,0:23:16.21:0,16,188	0/0:12,0:10:3.01:0,3,33	1/1:16,26:35:75.16:887,75,0	1/1:5,19:20:21.07:262,21,0	0/0:14,0:13:19.91:0,20,141	0/0:9,0:8:6.01:0,6,63	1/1:5,17:19:17.54:224,18,0	1/1:3,20:20:30.09:375,30,0	1/1:1,25:22:25.74:336,26,0	0/0:35,0:35:27.64:0,28,249	0/1:21,0:20:15.13:15,0,132	0/0:18,0:18:33.37:0,33,283	0/0:18,0:14:11.76:0,12,95	1/1:10,10:18:32.93:384,33,0	1/1:7,14:18:15.05:188,15,0	0/0:14,1:13:0.47:0,0,1	0/0:15,0:15:8.68:0,9,94	0/0:14,0:14:8.19:0,8,92	0/0:11,0:10:12.03:0,12,125	0/0:22,1:22:17.26:0,17,149	1/1:12,9:20:32.52:422,33,0	1/1:4,26:30:75.03:936,75,0	1/1:4,10:11:21.07:262,21,0
chr10	8366150	.	GAC	G	3617.17	PASS	AB=0.693;AC=31;AF=0.554;AN=56;BaseQRankSum=6.485;DP=593;FS=11.837;HRun=0;HaplotypeScore=140.5350;InbreedingCoeff=0.8281;MQ=43.47;MQ0=29;MQRankSum=2.004;QD=11.71;ReadPosRankSum=3.758;VQSLOD=2.7156;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,20:20:27.09:385,27,0	1/1:3,11:14:23.81:289,24,0	0/1:29,1:7:2.44:2,0,119	0/0:36,0:2:3.01:0,3,58	0/1:1,10:11:0.09:0,0,0	1/1:7,13:20:22.37:281,22,0	1/1:2,15:16:12.04:170,12,0	0/0:48,0:42:99:0,114,1408	0/0:19,0:16:26.84:0,27,325	1/1:15,2:16:35.94:472,36,0	1/1:3,6:8:5.98:85,6,0	0/0:21,0:18:21.42:0,21,238	0/0:31,0:28:59.29:0,59,770	0/0:29,0:25:39.44:0,39,488	1/1:9,23:32:26.23:385,26,0	1/1:4,18:21:20.78:292,21,0	1/1:1,18:19:30.50:405,31,0	1/1:3,12:12:12.04:171,12,0	0/0:17,0:14:41.91:0,42,453	0/0:16,0:14:24.02:0,24,315	0/1:6,14:18:0.11:0,0,0	1/1:1,17:18:9.01:129,9,0	1/1:2,12:14:8.93:129,9,0	1/1:1,10:10:12.04:164,12,0	1/1:4,15:18:17.99:257,18,0	0/0:21,0:20:10.64:0,11,606	0/0:31,0:30:82.76:0,83,854	0/0:15,0:11:30:0,30,354
chr10	8366156	.	GAC	G	3870.67	PASS	AB=0.976;AC=32;AF=0.571;AN=56;BaseQRankSum=5.731;DP=602;FS=7.797;HRun=0;HaplotypeScore=139.8174;InbreedingCoeff=0.8412;MQ=44.99;MQ0=22;MQRankSum=2.121;QD=12.17;ReadPosRankSum=3.764;VQSLOD=3.2377;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:22,1:22:27.15:386,27,0	1/1:12,0:12:23.81:304,24,0	0/1:35,0:9:17.09:17,0,256	0/0:33,0:5:5.91:0,6,74	1/1:16,0:16:11.72:97,12,0	1/1:19,0:19:19.42:259,19,0	1/1:19,0:18:12.04:170,12,0	0/0:49,0:43:99:0,120,2082	0/0:22,0:19:39.10:0,39,659	1/1:3,16:18:43.28:516,43,0	1/1:8,0:7:5.98:86,6,0	0/0:22,0:19:27.56:0,28,470	0/0:31,0:28:69.05:0,69,1177	0/0:27,0:24:43.01:0,43,766	1/1:27,0:27:26.23:385,26,0	1/1:24,0:23:23.77:316,24,0	1/1:18,1:19:30.50:403,31,0	1/1:14,0:12:15.02:193,15,0	0/0:17,0:14:41.79:0,42,660	0/0:18,0:16:30.08:0,30,508	0/1:19,1:18:0.11:0,0,0	1/1:18,0:18:12.01:154,12,0	1/1:13,0:13:8.93:129,9,0	1/1:11,0:10:12.04:175,12,0	1/1:20,1:20:20.51:280,21,0	0/0:21,0:20:14.23:0,14,837	0/0:31,0:30:84.28:0,84,1501	0/0:13,0:10:27.09:0,27,513
chr10	8367534	.	G	GA	6141.86	PASS	AB=0.594;AC=18;AF=0.321;AN=56;BaseQRankSum=-17.311;DP=619;FS=8.499;HRun=9;HaplotypeScore=105.0501;InbreedingCoeff=0.8337;MQ=83.50;MQ0=0;MQRankSum=-3.728;QD=26.14;ReadPosRankSum=-0.103;VQSLOD=4.0012;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,138,1190	0/0:5,0:5:8.99:0,9,78	0/0:23,0:22:28.92:0,29,261	0/0:19,0:19:16.70:0,17,129	0/0:22,0:22:56.97:0,57,495	0/0:20,0:20:47.96:0,48,416	0/0:22,0:22:56.94:0,57,490	1/1:7,25:32:49.14:769,49,0	1/1:1,12:13:33.09:365,33,0	0/0:17,0:17:47.99:0,48,416	0/0:16,0:16:41.97:0,42,365	1/1:4,24:28:72.15:783,72,0	1/1:1,23:24:60.16:664,60,0	1/1:1,23:24:66.18:730,66,0	0/0:26,0:26:68.96:0,69,595	0/0:18,0:18:47.99:0,48,417	0/0:23,0:24:62.02:0,62,527	0/0:17,0:17:38.98:0,39,339	0/1:6,9:15:33.67:263,0,34	1/1:5,25:30:75.17:817,75,0	0/0:18,0:20:50.03:0,50,423	0/0:20,0:21:56.01:0,56,474	0/0:18,0:18:35.95:0,36,308	0/0:21,0:21:56.98:0,57,494	0/0:18,0:19:34.80:0,35,291	0/1:6,21:27:5.97:624,0,6	1/1:6,32:39:93.25:1027,93,0	1/1:0,3:3:9.02:100,9,0
chr10	8370118	.	C	CCTA	26140.58	PASS	AB=0.931;AC=33;AF=0.589;AN=56;BaseQRankSum=-1.722;DP=749;FS=7.536;HRun=0;HaplotypeScore=111.3733;InbreedingCoeff=0.9274;MQ=87.29;MQ0=0;MQRankSum=-6.601;QD=55.03;ReadPosRankSum=3.676;VQSLOD=6.6150;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,36:37:96.33:2204,96,0	1/1:1,15:17:48.16:1099,48,0	0/0:24,0:23:50.43:0,50,675	0/0:33,0:32:87.92:0,88,1314	1/1:0,28:30:72.25:1657,72,0	1/1:1,25:26:69.24:1589,69,0	1/1:1,26:28:69.24:1582,69,0	0/0:26,0:26:66.22:0,66,1102	0/0:30,0:30:87.23:0,87,1375	1/1:0,33:33:96.31:2137,96,0	1/1:0,27:27:72.25:1651,72,0	0/0:27,0:27:81.28:0,81,1379	0/0:25,0:25:75.21:0,75,1190	0/0:27,0:27:78.25:0,78,1298	1/1:1,33:34:87.30:1999,87,0	1/1:1,28:29:72.24:1659,72,0	1/1:2,25:27:54.19:1239,54,0	1/1:0,18:18:51.18:1174,51,0	0/0:23,0:23:66.23:0,66,1124	0/0:32,0:32:84.27:0,84,1402	1/1:2,31:33:93.32:2140,93,0	1/1:1,27:28:63.22:1441,63,0	1/1:1,25:26:63.22:1446,63,0	1/1:1,30:31:75.26:1728,75,0	1/1:0,23:22:60.21:1381,60,0	0/1:25,2:27:16.95:17,0,1073	0/0:18,0:18:54.15:0,54,864	0/0:9,0:9:24.08:0,24,402
chr10	8370795	.	TTA	T	936.04	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=-3.073;DP=719;FS=0.000;HRun=0;HaplotypeScore=115.7501;InbreedingCoeff=0.3337;MQ=76.82;MQ0=1;MQRankSum=-2.083;QD=8.21;ReadPosRankSum=-5.597;VQSLOD=1.5073;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:61.54:0,62,858	0/0:9,0:9:0.72:0,1,158	0/0:24,0:23:60.04:0,60,935	0/0:15,0:15:25.56:0,26,461	0/1:29,0:29:17.72:18,0,409	0/1:25,0:25:1.92:2,0,440	0/0:26,0:26:47.81:0,48,515	0/0:29,0:28:80.30:0,80,1532	0/0:34,0:34:99:0,102,1846	0/0:29,0:29:30.38:0,30,500	0/0:18,0:18:53.76:0,54,425	0/0:29,0:29:87.30:0,87,1655	0/0:35,0:35:99:0,105,1753	0/0:26,0:26:78.25:0,78,1435	0/1:29,0:29:46.65:47,0,451	0/0:29,0:29:34.97:0,35,563	0/0:21,0:21:62.78:0,63,498	0/0:20,0:20:56.46:0,56,458	0/0:19,0:19:57.18:0,57,1010	0/0:27,0:27:81.22:0,81,1397	1/1:0,31:30:66.22:985,66,0	0/0:20,0:20:59.71:0,60,466	0/0:22,0:22:39.42:0,39,454	0/0:39,0:39:41.32:0,41,752	0/0:24,0:24:22.91:0,23,462	0/0:30,0:30:90.26:0,90,1637	0/0:36,0:36:99:0,108,1926	0/0:6,0:6:18.06:0,18,346
chr10	8371257	.	TTTG	T	12598.99	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=0.859;DP=614;FS=2.410;HRun=0;HaplotypeScore=170.5976;InbreedingCoeff=0.8593;MQ=56.29;MQ0=5;MQRankSum=-0.508;QD=22.42;ReadPosRankSum=2.115;VQSLOD=5.0549;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:25:35.44:241,35,0	1/1:6,0:10:20.82:146,21,0	0/0:27,0:13:14.72:0,15,224	0/0:25,0:18:14.31:0,14,220	1/1:15,0:28:50.18:328,50,0	1/1:9,0:16:23.74:162,24,0	1/1:10,0:16:22.09:151,22,0	1/1:14,6:20:30.01:347,30,0	1/1:7,19:26:57.19:799,57,0	1/1:17,12:29:57.10:690,57,0	1/1:12,13:25:51.11:647,51,0	1/1:7,13:20:45.14:611,45,0	1/1:9,18:27:57.18:783,57,0	1/1:11,16:27:60.20:839,60,0	1/1:11,18:29:66.22:924,66,0	1/1:8,0:24:50.62:363,51,0	1/1:11,0:18:22.58:154,23,0	1/1:3,0:17:5.95:42,6,0	1/1:14,4:17:27.08:358,27,0	1/1:11,19:30:72.20:957,72,0	1/1:16,0:17:14.20:77,14,0	1/1:5,9:14:36.08:482,36,0	1/1:10,14:23:51.17:714,51,0	1/1:8,12:20:45.05:565,45,0	1/1:5,0:12:23.68:157,24,0	1/1:6,24:30:81.26:1112,81,0	1/1:12,14:26:54.10:699,54,0	1/1:8,6:14:5.11:249,5,0
chr10	8371295	.	GTTTTTTGT	G	7495.97	PASS	AB=0.905;AC=30;AF=0.536;AN=56;BaseQRankSum=11.840;DP=653;FS=2.363;HRun=0;HaplotypeScore=268.0131;InbreedingCoeff=0.8093;MQ=49.94;MQ0=15;MQRankSum=-9.348;QD=22.38;ReadPosRankSum=3.683;VQSLOD=3.8062;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,20:29:27.01:558,27,0	1/1:1,8:9:17.91:334,18,0	0/0:31,0:13:11.34:0,11,187	0/0:21,0:7:8.04:0,8,105	1/1:9,20:29:65.37:942,65,0	1/1:3,14:17:21.07:521,21,0	1/1:8,17:25:3.63:249,4,0	0/0:33,0:28:45.09:0,45,1045	0/0:31,0:31:59.93:0,60,1330	1/1:26,0:26:37.33:590,37,0	1/1:17,0:17:6.02:88,6,0	0/0:17,0:17:27.06:0,27,616	0/0:32,0:32:78.26:0,78,2093	0/0:24,0:24:48.16:0,48,1197	1/1:33,0:33:54.17:987,54,0	1/1:11,16:27:44.72:829,45,0	0/1:13,4:16:12.01:391,0,12	1/1:15,1:16:11.96:176,12,0	0/0:24,0:22:42.05:0,42,852	0/0:28,0:28:60.04:0,60,1221	0/1:16,0:15:10.14:89,0,10	1/1:19,0:19:23.97:409,24,0	1/1:19,0:18:24.04:440,24,0	1/1:22,0:22:30.04:487,30,0	1/1:4,10:13:23.95:405,24,0	0/0:38,0:37:37.43:0,37,1872	0/0:22,0:22:45.15:0,45,1254	0/0:17,0:17:48.15:0,48,1192
chr10	8371310	.	GTTTTTTTGT	G	7350.16	PASS	AB=0.985;AC=29;AF=0.518;AN=56;BaseQRankSum=7.844;DP=634;FS=8.215;HRun=0;HaplotypeScore=268.5794;InbreedingCoeff=0.2091;MQ=52.20;MQ0=8;MQRankSum=-6.135;QD=15.98;ReadPosRankSum=2.139;VQSLOD=2.5685;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:26:33.34:293,0,33	1/1:8,0:8:17.91:201,18,0	0/1:16,0:10:5.84:6,0,307	0/0:17,0:10:18.04:0,18,266	0/1:29,1:30:99:409,0,203	1/1:16,0:16:21.07:289,21,0	0/1:24,0:24:2.65:143,0,3	0/0:29,0:23:18.99:0,19,928	0/1:33,0:33:4.63:5,0,1072	1/1:9,21:29:57.07:1058,57,0	1/1:7,6:13:9:164,9,0	0/0:15,0:15:2.83:0,3,599	0/0:33,0:33:34.81:0,35,1867	0/0:20,0:20:1.38:0,1,1069	1/1:6,33:39:53.96:1403,54,0	0/1:27,1:28:16.57:454,0,17	0/1:19,0:18:99:172,0,107	0/1:21,1:22:86.89:87,0,243	0/0:26,0:24:41.56:0,42,868	0/1:28,0:28:17.70:18,0,986	1/1:13,0:13:14.94:212,15,0	1/1:4,19:23:38.96:719,39,0	1/1:3,15:18:26.90:648,27,0	1/1:18,5:23:39:865,39,0	0/1:15,0:15:39.45:193,0,39	0/1:34,0:34:11.63:12,0,1900	0/0:18,0:18:43.33:0,43,1201	0/0:16,0:16:43.98:0,44,1179
chr10	8371318	.	GT	G	5519.26	PASS	AB=1.000;AC=38;AF=0.679;AN=56;BaseQRankSum=-0.237;DP=589;FS=1.574;HRun=10;HaplotypeScore=173.4085;InbreedingCoeff=0.7084;MQ=59.87;MQ0=5;MQRankSum=-2.957;QD=12.63;ReadPosRankSum=8.521;VQSLOD=2.3451;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:15.04:0,15,193	0/1:9,0:9:0.97:1,0,25	0/1:17,0:11:24.04:24,0,145	0/0:12,0:10:9.69:0,10,119	0/0:32,0:32:36.57:0,37,438	1/1:14,0:14:5.79:12,6,0	0/0:22,0:23:7.12:0,7,69	1/1:8,23:26:65.92:559,66,0	1/1:4,24:28:59.08:559,59,0	1/1:22,0:21:51.53:344,52,0	0/1:7,0:7:12.23:63,0,12	1/1:3,10:13:20.98:182,21,0	1/1:4,28:32:77.92:669,78,0	1/1:3,21:24:17.79:384,18,0	1/1:35,0:35:43.78:209,44,0	0/1:27,0:27:0.73:1,0,135	0/0:15,0:17:25.67:0,26,230	0/0:19,0:19:20.56:0,21,381	1/1:11,11:21:24.25:259,24,0	1/1:5,19:24:47.95:414,48,0	1/1:2,8:10:18:156,18,0	1/1:20,0:20:13.20:202,13,0	1/1:16,0:16:20.63:108,21,0	1/1:6,16:22:23.89:279,24,0	0/0:18,0:18:18.49:0,18,216	1/1:12,18:30:53.93:467,54,0	1/1:4,13:17:35.96:312,36,0	1/1:4,12:16:35.98:312,36,0
chr10	8371440	.	AGCTACAGGTTT	A	884.25	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.874;DP=701;FS=1.235;HRun=0;HaplotypeScore=221.5053;InbreedingCoeff=0.9977;MQ=73.07;MQ0=0;MQRankSum=-4.941;QD=68.02;ReadPosRankSum=-0.358;VQSLOD=3.3251;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:75.26:0,75,4161	0/0:9,0:9:27.07:0,27,1368	0/0:11,0:11:33.11:0,33,1640	0/0:16,0:16:48.16:0,48,2174	0/0:29,0:29:87.28:0,87,4635	0/0:31,0:31:93.31:0,93,4954	0/0:28,0:28:84.29:0,84,4434	0/0:25,0:23:63.22:0,63,3405	0/0:31,0:31:90.31:0,90,4913	0/0:31,0:31:93.31:0,93,5018	0/0:31,0:31:93.27:0,93,4956	0/0:21,0:21:63.19:0,63,3308	0/0:28,0:28:84.29:0,84,4872	0/0:20,0:20:60.21:0,60,3230	0/0:36,0:36:99:0,99,5388	0/0:33,0:33:99:0,99,5582	0/0:26,0:26:78.27:0,78,4387	0/0:16,0:16:48.12:0,48,2446	0/0:19,0:19:57.18:0,57,2975	0/0:36,0:36:99:0,105,5644	1/1:0,13:13:27.09:978,27,0	0/0:29,0:29:84.29:0,84,4669	0/0:30,0:30:82.22:0,82,4512	0/0:35,0:35:99:0,105,5834	0/0:23,0:23:69.24:0,69,3759	0/0:20,0:20:57.20:0,57,3148	0/0:25,0:25:75.26:0,75,4008	0/0:23,0:23:69.24:0,69,3876
chr10	8371890	.	T	TC	4419.23	PASS	AB=0.595;AC=19;AF=0.339;AN=56;BaseQRankSum=-14.938;DP=600;FS=12.893;HRun=8;HaplotypeScore=98.2773;InbreedingCoeff=0.9383;MQ=77.05;MQ0=2;MQRankSum=-1.916;QD=23.26;ReadPosRankSum=-0.097;VQSLOD=3.8648;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:78.02:0,78,707	0/0:6,0:6:18.01:0,18,164	0/0:40,0:29:38.44:0,38,349	0/0:38,0:27:46.09:0,46,377	0/0:27,0:27:72:0,72,649	0/0:17,0:17:45.02:0,45,411	0/0:27,0:27:38.90:0,39,525	1/1:4,20:24:48.11:533,48,0	1/1:1,10:11:27.08:312,27,0	0/0:27,0:27:60.02:0,60,549	0/0:20,0:20:54.02:0,54,494	1/1:2,13:15:24.07:277,24,0	1/1:6,11:17:42.11:471,42,0	1/1:5,13:18:13.03:358,13,0	0/0:16,0:17:41.03:0,41,357	0/0:20,0:20:51.02:0,51,467	0/0:26,0:26:75.01:0,75,680	0/0:17,0:17:51.03:0,51,467	1/1:5,19:24:32.71:630,33,0	1/1:7,11:18:30.09:346,30,0	0/0:1,0:25:40.26:0,40,117	0/0:19,0:19:51.02:0,51,464	0/0:12,0:12:33.02:0,33,302	0/0:24,0:24:66.03:0,66,604	0/0:17,0:17:42.02:0,42,383	0/1:7,15:22:3.81:454,0,4	1/1:2,11:13:30.09:346,30,0	1/1:2,26:28:60.18:692,60,0
chr10	8372311	.	GGGC	G	1289.78	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.253;DP=662;FS=3.336;HRun=0;HaplotypeScore=101.1071;InbreedingCoeff=0.9976;MQ=80.15;MQ0=0;MQRankSum=-1.717;QD=36.85;ReadPosRankSum=2.063;VQSLOD=4.5356;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,151,3621	1/1:2,5:7:21.07:342,21,0	0/0:18,0:18:51.18:0,51,1214	0/0:16,0:16:45.14:0,45,1037	0/0:18,0:18:54.17:0,54,1280	0/0:27,0:27:78.27:0,78,1899	0/0:26,0:26:78.27:0,78,1907	0/0:28,0:28:84.29:0,84,2058	0/0:19,0:19:57.20:0,57,1377	0/0:21,0:21:63.21:0,63,1487	0/0:21,0:21:63.22:0,63,1542	0/0:19,0:19:57.18:0,57,1357	0/0:22,0:22:66.23:0,66,1600	0/0:29,0:29:87.30:0,87,2113	0/0:31,0:31:93.31:0,93,2218	0/0:25,0:25:75.24:0,75,1800	1/1:4,24:28:71.24:1068,71,0	0/0:20,0:20:60.20:0,60,1393	0/0:23,0:23:69.22:0,69,1638	0/0:26,0:26:78.24:0,78,1820	0/0:35,0:35:99:0,105,2539	0/0:19,0:19:57.18:0,57,1342	0/0:21,0:21:63.22:0,63,1484	0/0:25,0:25:69.24:0,69,1677	0/0:25,0:25:72.25:0,72,1749	0/0:30,0:30:90.31:0,90,2217	0/0:23,0:22:69.24:0,69,1698	0/0:10,0:10:30.10:0,30,739
chr10	8372316	.	G	GATTC	2405.93	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.232;DP=661;FS=5.371;HRun=0;HaplotypeScore=114.0576;InbreedingCoeff=0.9956;MQ=80.86;MQ0=0;MQRankSum=-2.595;QD=66.83;ReadPosRankSum=1.176;VQSLOD=5.5736;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,150,3063	1/1:2,5:7:18.06:471,18,0	0/0:19,0:19:54.17:0,54,960	0/0:17,0:17:48.14:0,48,824	0/0:22,0:22:63.20:0,63,1259	0/0:27,0:27:78.23:0,78,1531	0/0:26,0:26:78.25:0,78,1535	0/0:30,0:30:87.27:0,87,1677	0/0:17,0:17:51.18:0,51,1069	0/0:20,0:20:60.19:0,60,1215	0/0:21,0:21:63.18:0,63,1278	0/0:18,0:18:54.19:0,54,1132	0/0:22,0:22:66.23:0,66,1368	0/0:28,0:28:84.27:0,84,1722	0/0:31,0:31:90.28:0,90,1812	0/0:24,0:24:72.25:0,72,1510	1/1:5,24:29:82.16:2054,82,0	0/0:18,0:18:51.15:0,51,1029	0/0:25,0:25:75.23:0,75,1433	0/0:24,0:24:69.23:0,69,1411	0/0:35,0:35:99:0,105,2126	0/0:18,0:18:54.18:0,54,1088	0/0:20,0:20:60.21:0,60,1246	0/0:24,0:24:66.23:0,66,1383	0/0:24,0:24:72.25:0,72,1510	0/0:31,0:31:90.31:0,90,1887	0/0:23,0:22:69.20:0,69,1364	0/0:10,0:10:30.09:0,30,589
chr10	8373242	.	T	TA	7136.88	PASS	AB=1.000;AC=44;AF=0.786;AN=56;BaseQRankSum=1.911;DP=581;FS=2.571;HRun=6;HaplotypeScore=78.0024;InbreedingCoeff=0.0976;MQ=74.06;MQ0=0;MQRankSum=-3.546;QD=13.02;ReadPosRankSum=11.324;VQSLOD=1.6780;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:16:34.36:147,34,0	1/1:11,0:11:4.40:69,4,0	0/0:26,0:21:15:0,15,201	0/0:7,0:4:8.44:0,8,53	0/1:33,0:33:87.41:169,0,87	0/1:20,0:20:24.01:99,0,24	1/1:20,0:20:29.99:114,30,0	0/1:40,0:40:94.73:156,0,95	0/1:16,0:16:12.60:89,0,13	1/1:3,35:38:99:1220,105,0	1/1:2,27:29:80.62:905,81,0	1/1:23,0:23:3.52:134,4,0	1/1:15,0:15:8.09:93,8,0	1/1:28,0:28:33.87:204,34,0	1/1:1,29:30:78.25:971,78,0	1/1:21,0:21:27.04:161,27,0	0/1:19,0:19:7.61:90,0,8	1/1:16,0:16:31.48:128,31,0	0/1:17,0:17:34.61:81,0,35	0/1:21,0:21:31.19:123,0,31	0/1:9,0:9:1.90:52,0,2	1/1:1,15:16:45.06:539,45,0	1/1:1,18:19:48.15:597,48,0	1/1:0,11:11:30.09:373,30,0	1/1:22,0:22:1.50:125,2,0	1/1:23,1:24:16.27:147,16,0	1/1:21,0:21:28.70:202,29,0	1/1:13,0:13:34.68:148,35,0
chr10	8373647	.	T	TG	12399.32	PASS	AB=0.540;AC=19;AF=0.339;AN=56;BaseQRankSum=-16.534;DP=798;FS=0.268;HRun=1;HaplotypeScore=75.0152;InbreedingCoeff=0.9210;MQ=84.41;MQ0=0;MQRankSum=-4.067;QD=40.13;ReadPosRankSum=0.390;VQSLOD=5.2872;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,150,1899	0/0:11,0:11:33.11:0,33,428	0/0:26,0:26:77.96:0,78,950	0/0:25,0:25:64.97:0,65,770	0/0:20,0:20:60.20:0,60,779	0/0:28,0:28:81.26:0,81,1052	0/0:36,0:36:99:0,99,1271	1/1:1,28:29:84.27:1239,84,0	0/0:18,0:18:54.18:0,54,701	0/0:32,0:32:93.30:0,93,1207	0/0:25,0:25:72.23:0,72,934	1/1:1,30:31:90.30:1349,90,0	1/1:2,28:30:84.27:1237,84,0	1/1:1,39:40:99:1684,114,0	0/0:35,0:35:99:0,105,1349	0/0:32,0:32:93.29:0,93,1193	0/0:34,0:34:96.31:0,96,1246	0/0:26,0:26:78.21:0,78,989	1/1:3,20:23:66.21:966,66,0	1/1:1,24:25:66.18:964,66,0	1/1:4,50:54:99:1980,114,0	0/0:23,0:23:69.22:0,69,895	0/0:17,0:17:45.15:0,45,583	0/0:30,0:30:90.28:0,90,1153	0/0:20,0:20:54.16:0,54,687	0/1:5,29:34:20.61:1182,0,21	1/1:0,32:32:87.29:1304,87,0	1/1:0,11:11:33.11:495,33,0
chr10	8374833	.	TA	T	7148.82	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=15.402;DP=712;FS=2.545;HRun=6;HaplotypeScore=67.7064;InbreedingCoeff=0.9984;MQ=80.94;MQ0=0;MQRankSum=-1.776;QD=27.29;ReadPosRankSum=2.277;VQSLOD=5.5013;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,34:37:90.22:967,90,0	1/1:1,7:8:18.04:192,18,0	0/0:21,0:21:57.17:0,57,715	0/0:14,0:14:29.53:0,30,322	1/1:1,30:31:84.11:877,84,0	1/1:0,28:28:75.19:806,75,0	1/1:3,22:25:60.15:643,60,0	0/0:41,0:41:99:0,111,1447	1/1:3,30:33:87.18:922,87,0	0/0:33,0:33:90.26:0,90,1165	0/0:25,0:25:72.21:0,72,916	0/0:25,0:25:72.23:0,72,947	0/0:24,0:24:69.21:0,69,884	0/0:30,0:30:84.26:0,84,1092	0/0:27,0:27:75.24:0,75,973	1/1:1,25:26:69.17:742,69,0	1/1:2,21:23:63.16:677,63,0	1/1:0,19:19:54.14:580,54,0	0/0:17,0:17:48.16:0,48,632	0/0:32,0:32:81.25:0,81,1049	0/0:30,0:30:87.28:0,87,1143	0/0:21,0:21:60.16:0,60,770	0/0:33,0:33:87.28:0,87,1142	0/0:24,0:24:72.19:0,72,928	1/1:5,27:32:69.17:742,69,0	0/0:20,1:21:24.93:0,25,666	0/0:21,0:21:60.20:0,60,789	0/0:11,0:11:33.11:0,33,433
chr10	8375285	.	CTCTA	C	11172.78	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=18.916;DP=720;FS=3.044;HRun=0;HaplotypeScore=140.4033;InbreedingCoeff=0.9992;MQ=85.71;MQ0=1;MQRankSum=-6.931;QD=45.60;ReadPosRankSum=3.974;VQSLOD=5.6721;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,32:33:69.24:1310,69,0	1/1:0,8:8:20.97:398,21,0	0/0:31,0:31:93.26:0,93,2251	0/0:25,0:24:56.94:0,57,1215	1/1:3,28:31:75.26:1422,75,0	1/1:0,24:24:51.07:929,51,0	1/1:2,19:21:48.16:910,48,0	0/0:36,0:36:99:0,99,2546	1/1:0,22:22:66.23:1234,66,0	0/0:35,0:35:99:0,102,2614	0/0:28,0:28:78.27:0,78,2098	0/0:26,0:26:72.25:0,72,1892	0/0:23,0:23:60.21:0,60,1619	0/0:24,0:24:63.20:0,63,1640	0/0:31,0:30:90.29:0,90,2329	1/1:2,31:33:81.28:1497,81,0	1/1:1,26:27:57.20:1082,57,0	1/1:3,14:17:45.11:797,45,0	0/0:18,0:18:54.19:0,54,1449	0/0:23,0:23:69.22:0,69,1807	0/0:15,0:15:45.15:0,45,1180	0/0:29,0:29:87.28:0,87,2290	0/0:30,0:30:90.30:0,90,2365	0/0:24,0:24:69.24:0,69,1843	1/1:0,29:29:84.29:1594,84,0	0/0:36,0:36:99:0,105,2779	0/0:31,0:31:90.29:0,90,2372	0/0:10,0:10:27.09:0,27,729
chr10	8375947	.	C	CCTCTCTCTCT	9746.77	PASS	AB=0.996;AC=47;AF=0.870;AN=54;BaseQRankSum=-5.056;DP=670;FS=1.186;HRun=0;HaplotypeScore=201.5321;InbreedingCoeff=0.1130;MQ=52.29;MQ0=15;MQRankSum=2.469;QD=15.72;ReadPosRankSum=1.758;VQSLOD=4.0971;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:32,0:31:10.93:220,11,0	0/1:8,0:8:2.21:134,0,2	0/0:22,0:7:2.51:0,3,52	0/1:44,0:17:3.22:9,0,3	1/1:23,0:24:13.32:141,13,0	0/1:30,0:30:8.20:351,0,8	0/1:23,0:22:8.63:96,0,9	1/1:40,0:40:34.64:280,35,0	1/1:15,0:15:23.31:226,23,0	1/1:24,0:23:37.24:646,37,0	1/1:22,0:21:24.06:447,24,0	1/1:20,0:21:23.82:556,24,0	./.	1/1:25,3:29:49.62:1056,50,0	1/1:28,0:29:26.20:294,26,0	1/1:20,1:22:21.55:330,22,0	1/1:11,0:12:12.04:321,12,0	1/1:10,0:9:15.01:428,15,0	1/1:15,4:20:9.40:284,9,0	1/1:19,0:19:26.81:368,27,0	1/1:23,0:23:21.90:284,22,0	1/1:19,0:19:17.04:267,17,0	1/1:11,7:20:2.19:148,2,0	1/1:20,3:23:11.71:327,12,0	0/1:22,0:22:9.50:286,0,10	1/1:32,0:32:66.90:918,67,0	1/1:24,1:25:29.94:660,30,0	1/1:23,0:23:42.01:672,42,0
chr10	8376008	.	CCT	C	3675.54	PASS	AB=0.800;AC=19;AF=0.339;AN=56;BaseQRankSum=6.859;DP=469;FS=5.783;HRun=0;HaplotypeScore=104.6185;InbreedingCoeff=0.8936;MQ=54.28;MQ0=27;MQRankSum=-4.779;QD=27.85;ReadPosRankSum=0.399;VQSLOD=5.0739;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,8:13:29.97:363,30,0	1/1:4,3:7:12.03:140,12,0	0/0:25,0:5:5.99:0,6,70	0/0:38,0:11:19.11:0,19,219	1/1:4,11:15:33.10:413,33,0	1/1:8,12:19:41.72:505,42,0	1/1:5,8:13:30.10:378,30,0	0/0:27,0:24:60.19:0,60,962	1/1:2,23:24:72.22:900,72,0	0/0:9,0:8:20.99:0,21,309	0/0:13,0:12:29.93:0,30,462	0/0:12,0:12:27.08:0,27,417	0/0:14,0:14:21.07:0,21,349	0/0:22,0:22:27.09:0,27,411	0/0:15,0:15:36.54:0,37,559	1/1:4,9:12:30.08:357,30,0	1/1:5,2:4:11.85:114,12,0	0/1:3,1:4:13.39:32,0,13	0/0:16,0:10:27.07:0,27,406	0/0:11,0:9:18.06:0,18,298	0/0:27,1:25:46.37:0,46,705	0/0:25,0:24:53.37:0,53,935	0/0:17,0:17:39.03:0,39,605	0/0:16,1:14:30.06:0,30,458	1/1:5,10:15:39.11:473,39,0	0/0:23,0:20:33.04:0,33,487	0/0:11,0:11:20.90:0,21,291	0/0:13,0:11:33.04:0,33,464
chr10	8376043	.	C	CG	3637.43	PASS	AB=0.625;AC=17;AF=0.304;AN=56;BaseQRankSum=0.255;DP=473;FS=9.290;HRun=0;HaplotypeScore=112.0609;InbreedingCoeff=0.6762;MQ=49.43;MQ0=33;MQRankSum=-1.834;QD=21.91;ReadPosRankSum=6.169;VQSLOD=5.0070;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,9:12:24.07:310,24,0	0/1:2,5:7:27.66:138,0,28	0/0:30,0:12:26.36:0,26,244	0/0:22,0:8:16.97:0,17,145	1/1:8,15:24:45.14:587,45,0	1/1:4,14:18:39.09:470,39,0	0/1:8,16:22:43.38:298,0,43	0/0:20,0:15:13.76:0,14,149	1/1:8,20:26:66.15:807,66,0	0/0:20,0:18:39.10:0,39,457	0/0:11,0:11:30.54:0,31,342	0/0:17,0:17:28.80:0,29,206	0/0:15,0:15:14.43:0,14,138	0/0:22,0:21:28.58:0,29,176	0/0:17,0:16:36.04:0,36,372	1/1:6,12:16:38.89:472,39,0	1/1:3,6:7:14.78:171,15,0	1/1:3,3:4:11.95:137,12,0	0/0:7,0:6:0.29:0,0,52	0/0:16,0:15:20.61:0,21,158	0/0:31,0:23:27:0,27,232	0/0:16,0:17:38.97:0,39,390	0/0:7,0:7:15.03:0,15,169	0/0:25,0:22:41.90:0,42,418	0/1:10,8:16:24.88:246,0,25	0/0:15,0:12:18.15:0,18,171	0/0:9,0:8:15.22:0,15,101	0/0:6,0:4:7.07:0,7,36
chr10	8376045	.	CCT	C	2679.34	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=-10.063;DP=461;FS=30.934;HRun=0;HaplotypeScore=114.4091;InbreedingCoeff=0.9251;MQ=50.46;MQ0=26;MQRankSum=3.089;QD=10.98;ReadPosRankSum=-3.017;VQSLOD=1.2456;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:10:24:0,24,211	0/0:7,0:7:11.98:0,12,100	0/0:31,0:12:18.97:0,19,212	0/0:21,0:8:7.89:0,8,125	0/0:26,0:26:47.74:0,48,413	0/0:19,0:19:38.65:0,39,324	0/0:23,0:22:29.94:0,30,253	1/1:18,0:16:22.80:118,23,0	0/0:26,0:24:59.97:0,60,516	1/1:14,6:18:36.08:425,36,0	1/1:4,7:11:21.07:271,21,0	1/1:17,0:17:31.63:167,32,0	1/1:16,0:17:23.29:141,23,0	1/1:22,0:22:25.85:134,26,0	1/1:10,7:16:35.74:403,36,0	0/0:18,0:16:42.01:0,42,381	0/0:9,0:7:14.99:0,15,130	0/0:6,0:4:11.97:0,12,99	1/1:7,0:6:8.56:43,9,0	1/1:14,0:14:17.11:86,17,0	1/1:26,0:21:16.70:86,17,0	1/1:10,7:17:23.85:294,24,0	1/1:5,1:6:8.81:81,9,0	1/1:5,17:20:33.11:425,33,0	0/0:19,0:18:27:0,27,235	1/1:12,2:12:14.58:120,15,0	1/1:10,0:9:17.28:93,17,0	1/1:6,0:4:2.21:14,2,0
chr10	8376046	.	CTCT	C	3793.50	PASS	AB=0.869;AC=21;AF=0.375;AN=56;BaseQRankSum=-10.516;DP=430;FS=10.832;HRun=0;HaplotypeScore=112.2983;InbreedingCoeff=0.7879;MQ=51.40;MQ0=23;MQRankSum=-0.578;QD=24.63;ReadPosRankSum=-4.718;VQSLOD=2.0157;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:10:24.08:0,24,411	0/0:7,0:7:11.95:0,12,209	0/0:30,0:12:32.27:0,32,385	0/0:20,0:8:19.56:0,20,239	0/0:26,0:26:48.16:0,48,828	0/0:19,0:19:31.09:0,31,647	0/0:21,0:20:27.41:0,27,509	1/1:1,15:15:39.46:549,39,0	0/0:24,0:23:53.13:0,53,995	0/0:18,0:16:24.05:0,24,125	0/1:9,0:9:6.70:7,0,40	1/1:1,15:16:36.05:598,36,0	1/1:12,3:16:35.81:462,36,0	1/1:1,20:21:32.83:508,33,0	0/0:16,0:15:15.87:0,16,59	0/0:16,0:15:42.14:0,42,743	0/0:9,0:7:15.05:0,15,245	0/0:5,0:4:12.04:0,12,196	1/1:1,5:6:15.02:222,15,0	1/1:0,12:12:26.97:395,27,0	1/1:14,7:18:27.97:424,28,0	0/0:15,0:15:11.34:0,11,31	0/1:5,0:6:12.40:12,0,49	0/0:21,0:20:15.73:0,16,41	0/0:17,0:17:30.08:0,30,497	1/1:3,10:11:15.46:248,15,0	1/1:1,8:8:17.94:321,18,0	0/1:4,2:4:2.90:49,0,3
chr10	8376121	.	CTCTCTCTCTCTCTT	C	2138.73	PASS	AB=0.889;AC=19;AF=0.352;AN=54;BaseQRankSum=6.705;DP=448;FS=41.071;HRun=0;HaplotypeScore=180.5741;InbreedingCoeff=0.7729;MQ=45.84;MQ0=43;MQRankSum=-5.782;QD=18.93;ReadPosRankSum=1.004;VQSLOD=1.4406;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:9,3:12:10.91:554,11,0	1/1:2,0:2:2.96:19,3,0	0/0:27,0:3:6.01:0,6,136	0/0:30,0:8:19.51:0,20,325	1/1:9,2:8:1.92:15,2,0	1/1:8,1:9:17.78:232,18,0	1/1:34,0:34:19.82:670,20,0	0/0:18,0:12:30.05:0,30,789	1/1:8,2:8:14.33:312,14,0	0/0:22,0:19:51.17:0,51,2065	0/0:12,0:11:11.68:0,12,187	0/0:13,0:11:24.04:0,24,915	0/0:26,0:24:54.14:0,54,1593	0/0:24,0:22:60.02:0,60,1988	0/0:22,0:21:47.95:0,48,1352	1/1:8,3:10:11.50:169,12,0	0/1:7,1:7:10.26:121,0,10	1/1:4,1:4:3.01:107,3,0	0/0:15,0:8:21.01:0,21,741	0/0:16,0:16:38.94:0,39,1265	0/0:25,0:17:30.49:0,30,828	0/0:23,0:21:44.23:0,44,1424	0/0:8,0:8:8.99:0,9,270	0/0:20,0:17:15.87:0,16,576	1/1:10,1:10:8.55:129,9,0	0/0:18,0:15:45.03:0,45,1204	0/0:10,0:10:17.98:0,18,571	./.
chr10	8376133	.	CTT	C	597.31	PASS	AB=0.818;AC=12;AF=0.214;AN=56;BaseQRankSum=5.512;DP=415;FS=2.316;HRun=3;HaplotypeScore=115.8810;InbreedingCoeff=0.0771;MQ=44.94;MQ0=33;MQRankSum=-4.165;QD=6.87;ReadPosRankSum=1.883;VQSLOD=0.5459;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:7,3:10:6.62:174,0,7	0/0:0,1:1:2.04:0,2,6	0/0:32,0:3:8.69:0,9,95	0/0:38,0:10:17.14:0,17,166	0/0:5,2:5:3.44:0,3,21	0/1:4,3:7:44.98:66,0,45	0/1:9,13:22:41.92:268,0,42	0/0:19,0:13:32.94:0,33,358	0/1:6,1:6:20.88:75,0,21	0/0:21,0:19:53.83:0,54,819	0/0:12,0:11:11.68:0,12,109	0/0:18,0:16:44.81:0,45,523	0/0:24,0:22:13.27:0,13,657	0/0:26,0:24:50.94:0,51,975	0/0:19,0:18:47.64:0,48,610	0/1:4,0:4:3.87:4,0,48	1/1:6,0:5:5.05:46,5,0	1/1:3,0:3:3.01:45,3,0	0/0:14,0:7:21.04:0,21,322	0/0:17,0:17:41.74:0,42,595	0/1:20,0:16:15.92:16,0,374	0/0:21,0:20:47.20:0,47,716	0/0:7,0:7:11.95:0,12,147	0/0:19,0:16:17.79:0,18,268	0/1:1,3:4:16.89:38,0,17	0/0:22,0:21:12:0,12,563	0/0:11,0:11:1.94:0,2,206	0/1:4,0:2:7.37:7,0,8
chr10	8376149	.	TTGTGTG	T	3796.22	PASS	AB=0.767;AC=33;AF=0.786;AN=42;BaseQRankSum=1.946;DP=391;FS=0.000;HRun=0;HaplotypeScore=118.0197;InbreedingCoeff=0.2146;MQ=45.49;MQ0=30;MQRankSum=0.490;QD=13.61;ReadPosRankSum=0.622;VQSLOD=2.8397;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:11:3.01:42,3,0	./.	./.	./.	0/0:5,0:5:0:0,0,0	1/1:6,0:6:2.84:14,3,0	1/1:19,0:19:0.47:1,0,0	0/0:15,0:11:3.98:0,4,50	./.	1/1:16,2:17:15.04:221,15,0	1/1:3,0:6:5.70:83,6,0	1/1:12,5:19:36.08:615,36,0	1/1:18,4:21:32.77:570,33,0	1/1:18,5:26:37.60:552,38,0	1/1:14,5:18:27.01:456,27,0	./.	./.	./.	1/1:9,0:7:9.02:109,9,0	1/1:10,6:17:27.03:455,27,0	0/1:16,0:15:6.59:74,0,7	0/1:16,1:22:1.84:84,0,2	1/1:4,1:5:6.02:103,6,0	1/1:15,4:17:12:171,12,0	0/0:6,0:6:0:0,0,0	0/1:12,2:20:28.63:220,0,29	1/1:7,0:8:2.84:14,3,0	1/1:1,0:2:2.68:11,3,0
chr10	8376451	.	GAGA	G	21713.96	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=6.396;DP=848;FS=13.372;HRun=0;HaplotypeScore=145.1539;InbreedingCoeff=0.9993;MQ=85.31;MQ0=0;MQRankSum=-6.352;QD=42.91;ReadPosRankSum=2.573;VQSLOD=6.1524;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:42:99:0,126,2852	0/0:8,0:8:21.07:0,21,475	0/0:32,0:32:68.71:0,69,1674	0/0:29,0:28:77.75:0,78,1534	0/0:24,0:24:69.24:0,69,1555	0/0:26,0:26:78.25:0,78,1725	0/0:24,0:24:72.25:0,72,1594	1/1:5,28:33:84.27:1368,84,0	0/0:41,0:41:99:0,120,2626	1/1:0,41:42:99:1915,117,0	1/1:0,17:17:48.16:797,48,0	1/1:0,30:30:84.29:1398,84,0	1/1:1,36:37:96.33:1597,96,0	1/1:3,36:39:99:1744,105,0	1/1:2,50:52:99:2246,135,0	0/0:34,0:34:99:0,99,2243	0/0:23,0:23:66.23:0,66,1480	0/0:25,0:25:66.23:0,66,1492	1/1:3,31:34:93.30:1497,93,0	1/1:0,25:25:60.21:999,60,0	1/1:5,41:46:96.33:1599,96,0	1/1:2,17:19:45.15:745,45,0	1/1:0,25:25:72.25:1193,72,0	1/1:0,35:35:93.32:1548,93,0	0/0:33,0:33:93.28:0,93,2059	1/1:3,28:31:81.25:1321,81,0	1/1:3,29:32:78.27:1297,78,0	1/1:0,9:9:27.09:450,27,0
chr10	8378005	.	ATCCATCCATCCGTCCATCTG	A	7572.18	PASS	AB=0.831;AC=16;AF=0.286;AN=56;BaseQRankSum=9.492;DP=801;FS=65.532;HRun=0;HaplotypeScore=388.5186;InbreedingCoeff=0.7963;MQ=53.91;MQ0=8;MQRankSum=-8.618;QD=53.70;ReadPosRankSum=0.263;VQSLOD=2.1208;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:11,5:16:33.57:680,0,34	1/1:0,8:8:9.03:384,9,0	0/0:55,0:23:39:0,39,1118	0/0:48,0:29:59.83:0,60,2463	1/1:17,2:19:26.82:273,27,0	1/1:11,6:17:33.11:1368,33,0	1/1:12,3:15:36.04:981,36,0	0/0:51,0:51:99:0,114,4960	0/0:37,0:37:72.14:0,72,2799	0/0:42,0:42:99:0,114,7998	0/0:15,0:15:36.12:0,36,2649	0/0:36,0:36:99:0,102,7231	0/0:39,0:39:99:0,99,7126	0/0:42,0:42:99:0,108,6328	0/0:47,0:47:99:0,129,8446	1/1:15,9:24:66.06:2648,66,0	1/1:6,1:7:7.67:196,8,0	0/1:8,1:9:48.01:208,0,48	0/0:32,0:31:75.16:0,75,4248	0/0:20,0:20:54.10:0,54,3363	0/0:58,0:58:99:0,141,10617	0/0:23,0:23:51.08:0,51,2647	0/0:16,0:16:33.11:0,33,1967	0/0:33,0:32:87.13:0,87,6043	1/1:4,21:26:18.06:834,18,0	0/0:30,0:30:84.23:0,84,5645	0/0:28,0:28:42.11:0,42,4150	0/0:8,0:8:15:0,15,1037
chr10	8378025	.	G	GTCCA	1892.11	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=12.379;DP=757;FS=33.125;HRun=0;HaplotypeScore=176.3451;InbreedingCoeff=0.8929;MQ=50.05;MQ0=11;MQRankSum=-10.440;QD=13.61;ReadPosRankSum=-0.239;VQSLOD=1.6763;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:12,0:12:12.03:148,12,0	1/1:9,0:9:11.89:113,12,0	0/0:51,0:16:27.08:0,27,414	0/0:51,0:23:29.35:0,29,470	1/1:11,0:11:2.75:13,3,0	1/1:11,0:11:13.33:187,13,0	1/1:10,0:10:17.54:194,18,0	0/0:42,0:42:77.49:0,77,1270	1/1:26,9:35:44.52:1065,45,0	0/0:42,0:42:99:0,102,1709	0/0:17,0:17:48.16:0,48,800	0/0:39,0:39:99:0,102,1669	0/0:40,0:40:90.31:0,90,1508	0/0:40,0:40:93.29:0,93,1517	0/0:44,0:44:99:0,105,1742	1/1:19,0:19:14.77:200,15,0	1/1:5,0:5:5.50:46,6,0	0/1:4,0:4:0.02:37,0,0	0/0:31,0:28:60.21:0,60,1005	0/0:19,0:19:39.12:0,39,623	0/0:64,0:64:99:0,154,2609	0/0:15,0:15:27.09:0,27,441	0/0:15,0:15:30.10:0,30,483	0/0:40,0:39:87.30:0,87,1439	1/1:23,0:23:15.67:89,16,0	0/0:37,0:37:87.27:0,87,1391	0/0:26,0:26:60.20:0,60,990	0/0:5,0:5:15.05:0,15,253
chr10	8378065	.	A	AT	906.85	PASS	AB=0.942;AC=10;AF=0.179;AN=56;BaseQRankSum=11.183;DP=725;FS=1.774;HRun=0;HaplotypeScore=172.6263;InbreedingCoeff=0.2279;MQ=50.91;MQ0=6;MQRankSum=-9.911;QD=7.56;ReadPosRankSum=-1.335;VQSLOD=3.5950;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:16,0:14:11.96:12,0,129	0/1:9,0:9:77.19:85,0,77	0/0:44,0:24:52.33:0,52,704	0/0:31,0:13:29.83:0,30,375	0/0:18,0:18:3.19:0,3,8	0/1:14,1:15:53.54:54,0,148	0/0:8,0:8:13.32:0,13,169	0/0:36,0:35:96.24:0,96,1285	1/1:3,8:20:50.70:392,51,0	0/0:35,0:35:99:0,102,1404	0/0:17,0:17:48.12:0,48,644	0/0:42,0:42:99:0,123,1710	0/0:40,0:40:99:0,114,1510	0/0:43,0:43:99:0,115,1643	0/0:35,0:35:99:0,99,1326	0/1:24,0:24:73.17:147,0,73	1/1:3,2:5:6.27:105,6,0	0/1:3,2:5:69.62:70,0,71	0/0:17,0:16:45.12:0,45,578	0/0:21,0:20:57.15:0,57,743	0/0:70,0:70:99:0,162,2220	0/0:20,0:19:45.01:0,45,628	0/0:23,0:23:63.18:0,63,856	0/0:43,0:42:62.49:0,62,1381	0/1:26,0:26:99:193,0,102	0/0:29,0:29:84.28:0,84,1169	0/0:23,0:23:66.22:0,66,919	0/0:10,0:10:23.52:0,24,270
chr10	8378080	.	AT	A	183.67	PASS	AB=0.941;AC=4;AF=0.071;AN=56;BaseQRankSum=6.157;DP=712;FS=4.679;HRun=1;HaplotypeScore=192.1610;InbreedingCoeff=0.2826;MQ=51.68;MQ0=8;MQRankSum=-5.702;QD=2.96;ReadPosRankSum=0.971;VQSLOD=-0.0399;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:12:21.89:0,22,181	0/0:9,0:8:17.37:0,17,136	0/0:39,0:17:51.09:0,51,723	0/0:29,0:16:45.11:0,45,638	1/1:21,0:21:1.17:5,1,0	0/0:19,0:19:30.42:0,30,317	0/0:6,0:6:14.08:0,14,179	0/0:37,0:36:99:0,106,1586	0/1:26,4:30:99:258,0,228	0/0:33,0:33:99:0,99,1530	0/0:13,0:13:39.12:0,39,600	0/0:38,0:38:99:0,104,1632	0/0:34,0:34:96.33:0,96,1527	0/0:41,0:41:99:0,117,1844	0/0:33,0:33:81.26:0,81,1259	0/0:26,0:26:68.15:0,68,579	0/0:7,0:7:16.39:0,16,175	0/0:6,0:6:18.06:0,18,249	0/0:15,0:15:45.14:0,45,688	0/0:18,0:18:51.17:0,51,814	0/0:68,0:68:99:0,157,2350	0/0:23,0:23:48.16:0,48,765	0/0:21,0:21:51.11:0,51,772	0/0:43,0:43:99:0,106,1657	0/0:24,0:24:29.56:0,30,192	0/0:26,0:26:72.23:0,72,1107	0/0:27,0:27:66.21:0,66,1022	0/1:11,0:11:0.87:1,0,259
chr10	8378090	.	CCAT	C	3130.63	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=14.945;DP=737;FS=9.939;HRun=0;HaplotypeScore=211.3689;InbreedingCoeff=0.8832;MQ=49.68;MQ0=10;MQRankSum=-13.565;QD=17.69;ReadPosRankSum=-2.682;VQSLOD=1.8383;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,1:13:24.04:298,24,0	1/1:12,0:11:20.99:240,21,0	0/0:44,0:21:38.26:0,38,725	0/0:30,0:19:7.90:0,8,478	1/1:21,0:21:5.87:85,6,0	1/1:26,0:26:51.10:647,51,0	1/1:5,1:6:5.75:43,6,0	0/0:34,0:34:84.28:0,84,1601	1/1:21,9:31:53.56:737,54,0	0/0:33,0:33:93.31:0,93,1763	0/0:14,0:14:39.13:0,39,813	0/0:40,0:40:94.36:0,94,2122	0/0:37,0:37:99:0,105,2145	0/0:41,0:41:99:0,105,2247	0/0:33,0:33:78.23:0,78,1449	1/1:31,0:31:58.36:591,58,0	1/1:8,0:8:10.37:111,10,0	0/1:5,0:5:6.55:17,0,7	0/0:18,0:18:51.17:0,51,855	0/0:19,0:19:54.18:0,54,1065	0/0:69,0:69:99:0,130,2681	0/0:21,0:21:48.16:0,48,1035	0/0:21,0:21:51.17:0,51,933	0/0:43,0:42:92.83:0,93,1894	1/1:22,0:22:47.56:570,48,0	0/0:24,0:24:60.20:0,60,1233	0/0:27,0:27:69.23:0,69,1387	0/0:11,0:11:26.16:0,26,413
chr10	8378092	.	A	AC	1057.25	PASS	AB=0.928;AC=15;AF=0.268;AN=56;BaseQRankSum=13.391;DP=733;FS=4.715;HRun=2;HaplotypeScore=197.2553;InbreedingCoeff=0.3198;MQ=50.52;MQ0=10;MQRankSum=-12.091;QD=5.08;ReadPosRankSum=-0.957;VQSLOD=0.1099;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:13,1:13:2.92:51,3,0	1/1:11,0:10:13.35:105,13,0	0/0:46,0:23:51.94:0,52,658	0/1:33,0:21:0.11:0,0,532	1/1:21,0:21:3.03:11,3,0	0/1:26,0:26:27.75:128,0,28	0/1:5,1:6:2.40:2,0,94	0/0:31,0:31:90.30:0,90,1256	1/1:23,9:31:3.98:356,4,0	0/0:31,0:31:93.31:0,93,1300	0/0:13,0:13:39.13:0,39,545	0/0:40,0:40:99:0,104,1409	0/0:37,0:37:99:0,105,1461	0/0:40,0:40:99:0,108,1469	0/0:32,0:32:81.27:0,81,1124	0/1:27,4:31:6.29:318,0,6	0/1:6,2:8:16.03:74,0,16	0/1:4,0:4:14.41:14,0,62	0/0:20,0:20:57.18:0,57,773	0/0:19,0:19:57.17:0,57,772	0/0:67,0:67:99:0,139,1907	0/0:22,0:22:48.02:0,48,671	0/0:21,0:21:51.03:0,51,712	0/0:40,0:40:93.78:0,94,1290	0/1:21,1:22:52.83:151,0,53	0/0:26,0:26:69.13:0,69,935	0/0:27,0:27:69.23:0,69,953	0/0:11,0:11:27.03:0,27,322
chr10	8378093	.	T	TC	4224.33	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=16.428;DP=762;FS=4.939;HRun=1;HaplotypeScore=212.5278;InbreedingCoeff=0.9349;MQ=49.86;MQ0=11;MQRankSum=-15.294;QD=20.71;ReadPosRankSum=-3.289;VQSLOD=3.5544;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,8:16:26.12:360,26,0	1/1:5,9:13:35.92:419,36,0	0/0:43,1:23:21.54:0,22,612	0/0:32,1:20:13.25:0,13,514	1/1:14,8:22:6.45:79,6,0	1/1:11,20:31:67.58:880,68,0	1/1:9,1:9:11.73:122,12,0	0/0:33,0:33:84.26:0,84,1077	1/1:24,11:34:67.35:672,67,0	0/0:31,0:31:93.30:0,93,1207	0/0:13,0:13:39.13:0,39,506	0/0:39,0:39:94.34:0,94,1263	0/0:38,0:38:99:0,105,1359	0/0:39,0:39:99:0,105,1361	0/0:33,0:33:78.22:0,78,982	1/1:16,20:36:71.94:909,72,0	1/1:5,3:8:13.23:148,13,0	1/1:3,2:5:0.49:53,0,0	0/0:20,0:20:57.18:0,57,730	0/0:21,0:21:54.18:0,54,701	0/0:65,0:65:99:0,131,1709	0/0:22,0:22:48.02:0,48,623	0/0:21,0:21:51.03:0,51,662	0/0:41,0:40:92.33:0,92,1194	1/1:9,17:26:59.39:582,59,0	0/0:25,0:25:60.12:0,60,790	0/0:27,0:27:69.22:0,69,894	0/0:11,0:11:24.07:0,24,257
chr10	8378101	.	CCATT	C	1379.79	PASS	AB=0.981;AC=14;AF=0.250;AN=56;BaseQRankSum=12.543;DP=794;FS=39.184;HRun=0;HaplotypeScore=251.0011;InbreedingCoeff=0.4835;MQ=48.24;MQ0=9;MQRankSum=-13.168;QD=6.60;ReadPosRankSum=-0.668;VQSLOD=1.3999;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:18,0:18:24.03:107,0,24	1/1:14,0:13:0.16:130,0,0	0/0:45,0:23:29.24:0,29,910	0/0:38,0:23:56.92:0,57,936	0/1:24,0:24:0.24:27,0,0	1/1:30,0:30:45.05:286,45,0	0/1:12,0:11:11.27:51,0,11	0/0:34,0:34:96.21:0,96,1854	0/1:35,5:39:19.86:384,0,20	0/0:33,0:33:99:0,99,2213	0/0:17,0:17:47.17:0,47,857	0/0:42,0:42:99:0,108,2234	0/0:40,0:40:99:0,111,2620	0/0:39,0:39:99:0,105,2436	0/0:34,0:34:92.86:0,93,1728	0/1:35,0:35:6.09:228,0,6	1/1:7,0:7:8.85:63,9,0	0/1:4,0:4:2.70:12,0,3	0/0:19,0:19:51.09:0,51,999	0/0:21,0:21:62.59:0,63,1231	0/0:65,0:65:99:0,136,2945	0/0:27,0:27:59.98:0,60,1220	0/0:24,0:24:53.84:0,54,1086	0/0:42,0:41:86.44:0,86,1864	1/1:25,0:25:13.06:258,13,0	0/0:26,0:26:78.12:0,78,1593	0/0:28,0:28:72.11:0,72,1594	0/0:11,0:11:16.32:0,16,421
chr10	8378103	.	AT	A	2027.91	PASS	AB=0.747;AC=11;AF=0.196;AN=56;BaseQRankSum=10.769;DP=797;FS=7.294;HRun=2;HaplotypeScore=215.7857;InbreedingCoeff=-0.0303;MQ=48.87;MQ0=9;MQRankSum=-9.379;QD=11.08;ReadPosRankSum=1.715;VQSLOD=1.8916;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:13,6:19:99:234,0,102	0/1:9,6:14:83.61:174,0,84	0/0:44,1:24:50.84:0,51,858	0/0:39,1:23:62.96:0,63,843	0/1:21,3:24:24.57:34,0,25	0/1:14,16:30:99:447,0,114	0/1:7,5:11:39.69:98,0,40	0/0:35,0:35:99:0,105,1466	0/0:40,0:39:51.27:0,51,516	0/0:33,0:33:99:0,99,1468	0/0:18,0:18:48.07:0,48,648	0/0:42,0:42:99:0,108,1558	0/0:41,0:41:99:0,111,1642	0/0:38,0:38:99:0,105,1546	0/0:35,0:35:93.24:0,93,1340	0/1:18,17:35:99:546,0,198	0/1:6,2:8:35.16:36,0,35	1/1:0,4:4:11.24:110,11,0	0/0:19,0:19:54.17:0,54,779	0/0:21,0:21:60.20:0,60,893	0/0:63,0:63:99:0,123,1829	0/0:26,0:26:45.14:0,45,657	0/0:23,0:23:51:0,51,664	0/0:40,0:39:80.87:0,81,1185	0/1:9,16:25:96.41:429,0,96	0/0:27,0:27:78.26:0,78,1145	0/0:28,0:28:72.24:0,72,1070	0/1:10,1:11:71.73:72,0,242
chr10	8378126	.	C	CACTT	2368.64	PASS	AB=0.875;AC=13;AF=0.232;AN=56;BaseQRankSum=6.674;DP=907;FS=34.699;HRun=0;HaplotypeScore=324.2878;InbreedingCoeff=-0.3064;MQ=49.65;MQ0=17;MQRankSum=-10.567;QD=6.35;ReadPosRankSum=-5.815;VQSLOD=1.0751;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:17,9:26:99:221,0,499	0/1:14,5:18:99:411,0,367	0/0:58,0:23:47.78:0,48,1068	0/0:66,0:28:55.86:0,56,1235	0/1:27,7:35:99:150,0,216	0/1:35,5:40:99:343,0,801	0/1:15,5:19:99:109,0,418	0/0:38,0:37:99:0,102,2087	0/0:43,0:42:78.44:0,78,1009	0/0:25,0:25:74.81:0,75,1414	0/0:23,0:23:39.44:0,39,726	0/1:42,0:42:95.54:96,0,1651	0/0:38,0:38:38.85:0,39,1776	0/1:41,0:41:99:124,0,1636	0/0:47,0:47:99:0,103,2026	0/1:30,6:36:99:262,0,1046	0/1:8,6:15:99:232,0,182	0/1:8,1:9:71.67:72,0,176	0/1:16,0:16:46.87:47,0,655	0/0:23,0:23:8.89:0,9,930	0/0:46,0:46:76.65:0,77,2060	0/0:26,0:26:51.44:0,51,1008	0/0:24,0:24:46.97:0,47,941	0/0:40,0:40:67.08:0,67,1290	0/1:38,5:42:99:413,0,772	0/1:31,0:31:44.08:44,0,1239	0/0:29,0:29:20.22:0,20,1052	0/0:5,0:8:20.51:0,21,284
chr10	8378134	.	CACTT	C	2404.38	PASS	AB=0.912;AC=18;AF=0.321;AN=56;BaseQRankSum=4.221;DP=937;FS=0.360;HRun=0;HaplotypeScore=320.7800;InbreedingCoeff=-0.4547;MQ=47.52;MQ0=26;MQRankSum=-8.203;QD=4.53;ReadPosRankSum=-7.354;VQSLOD=0.1343;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:24,5:30:99:272,0,686	0/1:20,1:20:99:268,0,437	0/0:63,0:23:55.05:0,55,1120	0/0:70,0:29:86.79:0,87,1640	0/1:36,9:45:99:336,0,212	0/1:39,6:45:99:353,0,1243	0/1:23,0:22:98.58:99,0,596	0/1:41,2:42:0.56:1,0,2527	0/0:46,0:45:60.89:0,61,974	0/1:25,0:25:8.13:8,0,974	0/1:24,0:24:37.29:37,0,492	0/1:36,0:36:41.28:41,0,1445	0/0:36,0:36:36.55:0,37,1936	0/0:37,0:37:33.59:0,34,1652	0/1:49,0:49:87.03:87,0,1030	0/1:34,2:36:87.25:87,0,1331	0/1:12,5:17:99:203,0,217	0/1:5,6:11:78.96:79,0,189	0/0:18,0:17:17.33:0,17,929	0/1:21,0:21:99:211,0,759	0/0:39,0:39:25.61:0,26,1820	0/0:26,0:26:27.12:0,27,858	0/1:24,0:24:18.29:18,0,560	0/0:39,2:41:10.06:0,10,960	0/1:38,9:45:99:330,0,1101	0/0:30,0:30:21.07:0,21,1468	0/1:28,0:28:89.47:89,0,1128	0/1:4,0:6:41.48:41,0,99
chr10	8378138	.	TATCCATCCATCC	T	6530.17	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-1.426;DP=998;FS=8.888;HRun=0;HaplotypeScore=420.3155;InbreedingCoeff=0.9574;MQ=48.24;MQ0=26;MQRankSum=-2.129;QD=34.01;ReadPosRankSum=2.369;VQSLOD=2.8790;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:53.98:0,54,1212	0/0:22,0:21:48.15:0,48,983	0/0:58,0:19:27.98:0,28,1068	0/0:69,0:28:29.29:0,29,834	0/0:47,0:47:25.53:0,26,445	0/0:45,0:45:99:0,102,2056	0/0:23,0:22:35.14:0,35,993	0/0:45,0:43:66.18:0,66,1907	0/0:28,0:45:17.70:0,18,386	1/1:7,18:25:51.16:1438,51,0	1/1:6,17:23:32.94:670,33,0	0/0:15,0:47:66.51:0,67,1746	0/0:23,0:37:46.94:0,47,1938	0/0:20,0:46:63.19:0,63,1292	1/1:12,39:51:81.15:2439,81,0	0/0:37,0:38:78.08:0,78,2207	0/0:18,0:18:35.98:0,36,719	0/0:11,0:11:12.02:0,12,267	0/0:14,0:20:39.12:0,39,812	0/0:10,0:28:50.43:0,50,873	0/0:29,0:43:38.05:0,38,868	1/1:9,17:26:30.40:802,30,0	1/1:7,17:24:20.94:610,21,0	1/1:20,23:43:17.68:571,18,0	0/0:47,0:45:73.07:0,73,1396	0/0:12,1:42:6.34:0,6,2772	0/0:18,0:34:44.62:0,45,1364	0/0:5,0:8:8.96:0,9,253
chr10	8378627	.	TAC	T	9400.36	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=17.335;DP=800;FS=1.655;HRun=0;HaplotypeScore=102.7738;InbreedingCoeff=0.9998;MQ=94.68;MQ0=0;MQRankSum=-8.366;QD=41.05;ReadPosRankSum=4.438;VQSLOD=6.8720;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,48:49:99:2020,132,0	1/1:0,17:17:48.16:735,48,0	0/0:41,0:41:99:0,117,2115	0/0:31,0:31:85.77:0,86,1460	1/1:0,21:21:57.19:872,57,0	1/1:0,18:18:54.18:826,54,0	1/1:0,20:20:54.18:827,54,0	0/0:36,0:36:99:0,105,1922	0/0:35,0:35:99:0,102,1835	0/0:39,0:39:99:0,117,2215	0/0:17,0:17:45.15:0,45,861	0/0:30,0:30:90.31:0,90,1737	0/0:43,0:43:99:0,129,2389	0/0:20,0:20:60.21:0,60,1148	0/0:26,0:26:78.25:0,78,1464	1/1:1,26:27:75.25:1147,75,0	1/1:0,26:26:63.21:954,63,0	1/1:2,12:14:33.11:505,33,0	0/0:23,0:23:69.24:0,69,1312	0/0:23,0:23:69.22:0,69,1285	0/0:39,0:39:99:0,114,2157	0/0:36,0:36:99:0,108,2061	0/0:18,0:18:54.19:0,54,1043	0/0:31,0:31:93.31:0,93,1762	1/1:1,36:37:99:1515,99,0	0/0:29,0:29:87.27:0,87,1609	0/0:45,0:45:99:0,126,2426	0/0:9,0:9:27.09:0,27,521
chr10	8378885	.	C	CATCT	9263.74	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=-6.018;DP=864;FS=4.223;HRun=0;HaplotypeScore=144.7614;InbreedingCoeff=0.6368;MQ=56.05;MQ0=45;MQRankSum=1.627;QD=18.06;ReadPosRankSum=-0.142;VQSLOD=4.5843;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:46:91.41:0,91,745	0/0:10,0:10:20.65:0,21,180	0/0:61,0:22:42.55:0,43,438	0/0:63,0:20:33.31:0,33,402	0/0:19,0:18:34.82:0,35,272	0/0:17,0:17:29.82:0,30,257	0/0:27,0:27:72.01:0,72,570	1/1:31,0:26:68.75:580,69,0	1/1:29,0:29:25.43:299,25,0	1/1:31,0:30:60.60:575,61,0	1/1:27,0:26:16.10:418,16,0	1/1:1,31:34:36.12:970,36,0	1/1:1,29:33:41.82:1051,42,0	1/1:2,31:34:14.95:404,15,0	0/1:33,0:33:20.08:398,0,20	0/0:36,0:36:82.98:0,83,739	0/0:21,0:20:50.48:0,50,415	0/0:22,0:22:44.04:0,44,351	1/1:23,0:23:40:491,40,0	1/1:4,27:30:68.52:964,69,0	0/1:62,0:61:99:744,0,230	1/1:1,21:24:24.07:571,24,0	1/1:1,26:28:17.78:449,18,0	1/1:1,25:27:24.08:645,24,0	0/0:28,0:28:50.35:0,50,402	0/1:21,0:21:50.84:250,0,51	0/1:38,0:38:99:432,0,118	0/1:6,0:6:23.51:24,0,58
chr10	8378924	.	CCATCCATCCATT	C	4501.21	PASS	AB=0.996;AC=25;AF=0.446;AN=56;BaseQRankSum=-2.742;DP=801;FS=8.794;HRun=0;HaplotypeScore=243.9575;InbreedingCoeff=0.4514;MQ=62.99;MQ0=14;MQRankSum=-0.397;QD=10.02;ReadPosRankSum=-2.937;VQSLOD=1.8217;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:11,40:50:13.52:328,14,0	1/1:3,14:17:8.98:236,9,0	0/0:26,0:18:54.11:0,54,574	0/0:34,0:23:56.61:0,57,623	1/1:4,18:21:25.99:350,26,0	1/1:4,17:21:15.05:400,15,0	1/1:34,0:34:76.94:730,77,0	0/0:29,0:25:59.22:0,59,577	0/1:31,1:32:99:165,0,128	0/1:31,0:31:99:203,0,838	0/1:26,0:24:99:164,0,816	0/0:35,0:35:66.09:0,66,2475	0/0:38,0:38:86.87:0,87,2311	0/0:34,0:33:57.08:0,57,1331	0/1:33,0:33:99:201,0,1392	1/1:9,22:31:12:347,12,0	1/1:17,0:16:32.88:284,33,0	1/1:4,14:18:5.11:149,5,0	0/0:12,0:10:29.97:0,30,374	0/0:32,0:30:81.14:0,81,2169	0/0:55,0:54:99:0,125,3317	0/1:28,0:27:99:167,0,244	0/1:27,0:27:99:220,0,403	0/1:29,0:29:99:259,0,898	1/1:4,28:32:12.04:298,12,0	0/0:24,0:24:69.15:0,69,1706	0/0:27,0:27:72.08:0,72,2115	0/0:6,0:6:18.05:0,18,715
chr10	8378928	.	CCATCCATT	C	4745.54	PASS	AB=1.000;AC=27;AF=0.482;AN=56;BaseQRankSum=0.056;DP=800;FS=0.699;HRun=0;HaplotypeScore=199.7610;InbreedingCoeff=0.5878;MQ=67.98;MQ0=7;MQRankSum=-2.057;QD=10.62;ReadPosRankSum=-0.266;VQSLOD=3.4750;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:49,0:48:14.79:179,15,0	1/1:17,0:17:8.98:144,9,0	0/0:26,0:22:66.11:0,66,685	0/0:34,0:27:61.27:0,61,688	1/1:21,0:20:23.75:240,24,0	1/1:21,0:21:14.91:223,15,0	1/1:34,0:34:77.82:689,78,0	0/0:27,0:25:63.06:0,63,593	1/1:7,25:32:15.05:389,15,0	0/1:32,0:32:99:340,0,322	0/1:26,0:24:99:190,0,428	0/0:36,0:36:72.07:0,72,1743	0/0:37,0:37:86.31:0,86,1405	0/0:33,0:32:57.08:0,57,998	0/1:34,0:34:99:343,0,748	1/1:28,1:29:12.35:271,12,0	1/1:16,0:15:35.86:285,36,0	1/1:17,0:17:5.59:60,6,0	0/0:13,0:12:10.09:0,10,300	0/0:33,0:31:86.96:0,87,1423	0/0:53,0:52:99:0,118,2391	1/1:28,0:27:26.13:474,26,0	0/1:27,0:27:99:395,0,112	0/1:33,0:33:99:373,0,441	1/1:31,0:31:11.94:149,12,0	0/0:26,0:26:75.14:0,75,1344	0/0:28,0:28:72.01:0,72,1534	0/0:6,0:6:8.52:0,9,480
chr10	8378932	.	CCATT	C	4612.28	PASS	AB=0.923;AC=28;AF=0.500;AN=56;BaseQRankSum=0.741;DP=765;FS=4.920;HRun=0;HaplotypeScore=149.8979;InbreedingCoeff=0.5262;MQ=72.47;MQ0=4;MQRankSum=-2.419;QD=10.88;ReadPosRankSum=-0.209;VQSLOD=4.2272;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:41,0:41:15.74:126,16,0	1/1:15,0:15:8.86:88,9,0	0/0:32,0:28:84.09:0,84,850	0/0:37,0:29:58.95:0,59,700	1/1:19,0:18:23.75:184,24,0	1/1:17,0:17:14.91:139,15,0	1/1:29,0:30:83.76:698,84,0	0/0:25,0:23:61.12:0,61,589	1/1:31,0:31:15.05:179,15,0	0/1:7,23:30:50.76:517,0,51	0/1:24,0:23:99:244,0,232	0/0:36,0:36:72.05:0,72,1081	0/0:37,0:37:80.29:0,80,1033	0/0:31,0:31:63.03:0,63,736	0/1:35,1:36:99:544,0,264	1/1:23,0:23:11.87:142,12,0	1/1:13,0:14:38.87:312,39,0	1/1:14,0:14:2.99:23,3,0	0/1:13,0:12:16.91:17,0,217	0/0:32,0:30:69.52:0,70,917	0/0:50,0:50:99:0,128,1834	1/1:30,0:29:54.82:546,55,0	0/1:26,0:26:16.78:377,0,17	0/1:32,0:32:81.70:384,0,82	1/1:28,0:28:11.89:93,12,0	0/0:27,0:27:81.10:0,81,1033	0/0:27,0:27:69.87:0,70,1078	0/0:7,0:7:20.94:0,21,328
chr10	8385895	.	A	ATT	6842.83	PASS	AB=0.577;AC=33;AF=0.589;AN=56;BaseQRankSum=0.035;DP=585;FS=11.040;HRun=9;HaplotypeScore=78.5518;InbreedingCoeff=0.9245;MQ=68.96;MQ0=7;MQRankSum=-1.349;QD=19.28;ReadPosRankSum=0.118;VQSLOD=2.4540;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:84.20:0,84,892	0/0:10,0:10:23.86:0,24,237	0/0:14,0:10:15.57:0,16,127	0/0:18,0:14:24.02:0,24,251	0/0:26,0:26:57.09:0,57,607	0/0:17,0:17:42.09:0,42,447	0/0:14,0:14:39.10:0,39,415	1/1:14,30:47:99:1433,107,0	1/1:2,0:16:27.45:94,27,0	1/1:1,0:28:67.25:231,67,0	1/1:4,0:26:47.41:163,47,0	1/1:7,8:17:27.51:363,28,0	1/1:5,21:27:48.50:678,48,0	1/1:3,10:13:27.09:413,27,0	1/1:4,0:17:27.95:111,28,0	0/0:21,0:21:54.11:0,54,567	0/0:45,0:45:99:0,123,1287	0/0:10,0:10:21.03:0,21,223	1/1:7,10:16:32.55:424,33,0	1/1:4,26:32:80.73:1154,81,0	1/1:3,8:11:21.07:323,21,0	1/1:2,0:16:24.95:86,25,0	1/1:6,0:19:32.91:122,33,0	0/1:4,0:15:5:52,0,5	0/0:24,0:24:64.96:0,65,676	1/1:9,12:22:33.11:508,33,0	1/1:6,17:25:41.63:596,42,0	1/1:1,4:5:6.02:93,6,0
chr10	8388866	.	G	GA	2939.21	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=7.647;DP=704;FS=0.320;HRun=10;HaplotypeScore=92.7348;InbreedingCoeff=0.8605;MQ=66.70;MQ0=1;MQRankSum=-0.125;QD=13.93;ReadPosRankSum=-0.050;VQSLOD=3.6859;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,105,862	0/0:13,0:13:32.94:0,33,271	0/0:17,0:14:32.85:0,33,261	0/1:12,0:10:16.49:16,0,89	0/0:28,1:30:44.59:0,45,557	0/0:20,0:20:56.93:0,57,467	0/0:25,0:25:64.72:0,65,537	0/0:33,2:35:7.90:0,8,475	1/1:2,23:25:63.16:672,63,0	1/1:34,0:34:80.25:439,80,0	1/1:22,0:22:46.84:274,47,0	0/0:20,0:20:56.91:0,57,465	0/0:28,0:28:83.87:0,84,686	0/0:17,0:17:47.94:0,48,394	1/1:33,0:33:81.97:478,82,0	0/0:25,1:26:30.93:0,31,460	0/0:17,0:17:44.91:0,45,365	0/0:15,1:16:3.95:0,4,239	0/0:26,1:28:7.18:0,7,377	0/0:37,0:37:99:0,102,837	0/0:23,0:23:53.90:0,54,443	1/1:25,0:25:58.65:352,59,0	1/1:35,0:35:93.75:551,94,0	1/1:25,0:25:61.43:356,61,0	0/0:36,1:37:63.93:0,64,731	0/0:20,0:20:45.83:0,46,454	0/0:30,1:31:51.85:0,52,627	0/0:14,0:14:35.94:0,36,295
chr10	8388875	.	A	AG	6291.60	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=-11.177;DP=722;FS=0.994;HRun=0;HaplotypeScore=84.4916;InbreedingCoeff=0.8983;MQ=69.01;MQ0=1;MQRankSum=0.552;QD=32.60;ReadPosRankSum=2.490;VQSLOD=4.6134;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,114,1527	0/0:12,0:12:33.09:0,33,458	0/0:22,0:19:53.41:0,53,542	0/0:13,0:11:18.19:0,18,239	0/0:33,0:33:86.96:0,87,1135	0/0:22,0:22:63.19:0,63,846	0/0:25,0:25:72.22:0,72,961	0/0:31,0:31:76.29:0,76,1039	0/1:26,0:26:29.96:57,0,30	1/1:1,32:33:96.27:1273,96,0	1/1:0,17:17:48.15:656,48,0	0/0:23,0:23:66.19:0,66,867	0/0:33,0:33:90.28:0,90,1212	0/0:18,0:18:54.16:0,54,712	1/1:2,29:31:84.28:1172,84,0	0/0:26,0:26:63.76:0,64,885	0/0:16,0:16:48.10:0,48,625	0/0:18,0:18:41.92:0,42,554	0/0:25,0:25:62.55:0,63,818	0/0:41,0:41:99:0,123,1589	0/0:22,0:22:63.15:0,63,814	1/1:0,27:27:74.83:915,75,0	1/1:0,34:34:96.32:1340,96,0	1/1:0,25:25:63.21:879,63,0	0/0:36,0:36:90.04:0,90,1308	0/0:22,1:23:27.27:0,27,832	0/0:34,0:34:96.09:0,96,1266	0/0:15,0:15:45.11:0,45,573
chr10	8388937	.	T	TA	6453.39	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-16.234;DP=693;FS=14.082;HRun=7;HaplotypeScore=76.0386;InbreedingCoeff=0.9962;MQ=76.08;MQ0=1;MQRankSum=-4.897;QD=30.02;ReadPosRankSum=3.487;VQSLOD=4.0619;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,31:33:90.28:1087,90,0	1/1:1,9:10:21.06:254,21,0	0/0:15,0:15:39.02:0,39,363	0/0:12,0:12:20.97:0,21,193	1/1:6,23:29:70.46:836,70,0	1/1:1,26:27:75.23:906,75,0	1/1:2,17:19:45.14:544,45,0	0/0:35,0:35:87.10:0,87,830	0/0:17,0:17:42.06:0,42,406	0/0:24,0:24:69.10:0,69,662	0/0:16,0:16:39.05:0,39,372	0/0:27,0:27:78.11:0,78,748	0/0:26,0:26:69.10:0,69,661	0/0:26,0:26:75.12:0,75,724	0/0:32,0:32:93.12:0,93,891	1/1:3,23:26:59.90:725,60,0	1/1:1,25:26:63.19:761,63,0	1/1:1,17:18:51.16:616,51,0	0/0:27,0:27:60.09:0,60,579	0/0:33,0:33:81.12:0,81,782	0/0:34,0:33:90.13:0,90,863	0/0:26,0:26:63.09:0,63,608	0/0:34,0:34:75.10:0,75,724	0/0:30,0:30:72.11:0,72,694	1/1:4,23:27:60.18:725,60,0	0/0:24,0:23:66.07:0,66,625	0/0:35,0:35:99:0,99,956	0/0:5,0:5:15.02:0,15,145
chr10	8391024	.	GTGTTTCAGGT	G	957.22	PASS	AB=0.545;AC=1;AF=0.018;AN=56;BaseQRankSum=5.406;DP=552;FS=6.662;HRun=0;HaplotypeScore=169.4922;InbreedingCoeff=-0.0227;MQ=89.59;MQ0=0;MQRankSum=-5.640;QD=53.18;ReadPosRankSum=0.428;VQSLOD=2.7007;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,135,6586	0/0:6,0:6:18.06:0,18,943	0/0:18,0:18:42.06:0,42,1618	0/0:34,0:34:96.33:0,96,4373	0/0:9,0:9:27.08:0,27,1174	0/0:24,0:24:69.24:0,69,3485	0/0:22,0:22:63.22:0,63,2623	0/0:27,0:27:69.24:0,69,3360	0/1:3,15:18:37.75:1032,0,38	0/0:16,0:16:42.14:0,42,1887	0/0:9,0:9:27.09:0,27,1370	0/0:20,0:20:57.20:0,57,2627	0/0:18,0:18:51.18:0,51,2667	0/0:22,0:22:63.22:0,63,3119	0/0:27,0:27:81.28:0,81,3918	0/0:19,0:19:51.17:0,51,2565	0/0:31,0:31:87.30:0,87,4115	0/0:9,0:9:27.09:0,27,1198	0/0:24,0:24:69.24:0,69,3512	0/0:12,0:12:27.09:0,27,1410	0/0:31,0:31:87.30:0,87,4279	0/0:2,0:2:6.02:0,6,312	0/0:10,0:10:30.10:0,30,1463	0/0:36,0:36:93.30:0,93,4537	0/0:11,0:11:30.10:0,30,1531	0/0:21,0:21:63.22:0,63,2973	0/0:22,0:22:66.23:0,66,2841	0/0:7,0:7:15.02:0,15,509
chr10	8391227	.	T	TTA	2665.07	PASS	AB=0.814;AC=33;AF=0.825;AN=40;BaseQRankSum=-4.022;DP=199;FS=14.070;HRun=0;HaplotypeScore=40.4662;InbreedingCoeff=0.4277;MQ=84.94;MQ0=3;MQRankSum=-2.381;QD=17.77;ReadPosRankSum=1.747;VQSLOD=1.9031;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,0:7:10.08:37,10,0	./.	0/0:7,0:5:2.60:0,3,10	0/0:29,0:17:15.94:0,16,135	0/1:3,0:3:0:0,0,0	1/1:8,0:8:12.48:46,12,0	./.	1/1:12,20:30:45.95:887,46,0	1/1:1,0:4:9:79,9,0	1/1:3,0:3:2.50:9,2,0	0/1:3,0:4:0:0,0,0	1/1:3,1:4:3.01:49,3,0	1/1:2,0:2:6.02:96,6,0	1/1:1,2:3:6.02:97,6,0	./.	1/1:5,0:5:9.98:36,10,0	1/1:21,0:22:32.94:134,33,0	1/1:8,0:8:12.48:46,12,0	1/1:4,5:9:15.05:236,15,0	./.	./.	./.	./.	./.	1/1:6,0:6:4.99:18,5,0	1/1:1,5:6:15.05:243,15,0	0/1:4,5:9:21.62:180,0,22	1/1:3,12:15:36.12:584,36,0
chr10	8391243	.	A	AT	1596.64	PASS	AB=0.971;AC=25;AF=0.543;AN=46;BaseQRankSum=1.870;DP=201;FS=25.818;HRun=1;HaplotypeScore=40.0069;InbreedingCoeff=0.4673;MQ=92.57;MQ0=4;MQRankSum=-2.865;QD=12.38;ReadPosRankSum=7.880;VQSLOD=-0.1957;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,5:6:9.03:144,9,0	./.	0/0:9,0:7:11.41:0,11,103	0/0:32,0:18:23.46:0,23,282	1/1:3,0:3:9.03:114,9,0	1/1:0,9:8:15.05:240,15,0	./.	0/1:32,0:30:33.22:33,0,375	1/1:4,0:4:6.81:21,7,0	0/1:5,1:6:29.77:30,0,182	0/0:3,0:3:6:0,6,66	0/0:4,0:4:6.88:0,7,116	1/1:2,0:2:3.47:10,3,0	0/1:3,0:3:1.32:1,0,34	./.	1/1:1,6:6:12.04:192,12,0	1/1:0,16:17:39.13:605,39,0	1/1:0,6:6:15.05:240,15,0	0/1:8,0:8:1.09:1,0,70	0/0:5,0:5:12.03:0,12,145	0/0:3,0:3:9.03:0,9,119	0/0:4,0:4:12.04:0,12,160	./.	./.	1/1:1,4:5:6.02:96,6,0	1/1:6,0:6:7.77:19,8,0	0/0:11,0:11:6.38:0,6,171	0/1:15,0:15:16.74:17,0,92
chr10	8391840	.	TA	T	11213.03	PASS	AB=0.938;AC=35;AF=0.625;AN=56;BaseQRankSum=14.816;DP=699;FS=0.304;HRun=8;HaplotypeScore=70.6925;InbreedingCoeff=0.9393;MQ=76.84;MQ0=0;MQRankSum=-0.190;QD=25.14;ReadPosRankSum=0.590;VQSLOD=5.4854;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,108,1305	0/0:21,0:21:63.19:0,63,761	0/1:13,1:15:5.06:5,0,186	0/0:16,0:15:21.02:0,21,243	0/0:37,0:37:96.27:0,96,1130	0/0:25,0:25:66.20:0,66,797	0/0:17,0:17:42.12:0,42,496	1/1:4,26:30:78.09:741,78,0	1/1:1,17:18:48.08:464,48,0	1/1:3,33:36:99:956,99,0	1/1:2,24:26:69.10:666,69,0	1/1:2,21:23:63.10:608,63,0	1/1:1,33:34:93.15:898,93,0	1/1:2,21:23:60.09:579,60,0	1/1:1,34:35:99:985,102,0	0/0:31,0:31:84.25:0,84,1003	0/0:23,0:23:63.19:0,63,760	0/0:16,0:16:39.08:0,39,455	1/1:1,25:26:75.12:724,75,0	1/1:2,35:37:99:1014,105,0	1/1:1,14:15:39.06:377,39,0	1/1:1,16:17:45.07:435,45,0	1/1:3,28:31:77.82:753,78,0	1/1:2,14:16:39.06:377,39,0	0/0:29,0:29:87.25:0,87,1038	1/1:3,29:32:87.09:819,87,0	1/1:1,25:26:69.11:666,69,0	1/1:0,6:6:15.02:145,15,0
chr10	8392974	.	G	GA	22507.97	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-7.364;DP=736;FS=5.471;HRun=6;HaplotypeScore=64.7757;InbreedingCoeff=0.9968;MQ=74.62;MQ0=0;MQRankSum=-5.316;QD=31.84;ReadPosRankSum=5.545;VQSLOD=4.8435;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:2,41:43:99:1542,123,0	1/1:2,10:12:30.10:377,30,0	0/0:19,0:19:48.08:0,48,476	0/0:10,0:10:19.66:0,20,187	1/1:2,40:42:99:1434,120,0	1/1:0,21:21:51.16:642,51,0	1/1:3,25:28:66.21:830,66,0	1/1:5,19:24:54.17:679,54,0	1/1:1,18:19:54.17:679,54,0	1/1:4,35:40:99:1282,105,0	1/1:4,18:22:48.15:604,48,0	1/1:1,23:24:66.21:830,66,0	1/1:2,27:29:69.22:868,69,0	1/1:5,28:33:72.23:906,72,0	1/1:2,17:19:51.16:642,51,0	1/1:1,24:25:66.21:830,66,0	1/1:1,28:29:69.22:868,69,0	1/1:4,26:30:69.22:868,69,0	1/1:2,17:19:51.16:642,51,0	1/1:1,23:24:72.23:897,72,0	1/1:3,18:21:51.16:640,51,0	1/1:9,29:38:84.27:1057,84,0	1/1:5,27:32:75.24:943,75,0	1/1:6,35:41:99:1245,99,0	1/1:2,21:23:63.20:789,63,0	1/1:3,26:29:78.25:978,78,0	1/1:0,20:20:54.17:679,54,0	1/1:0,20:20:60.19:755,60,0
chr10	8394017	.	C	CG	9929.55	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-2.978;DP=776;FS=6.656;HRun=1;HaplotypeScore=134.3569;InbreedingCoeff=0.9998;MQ=83.84;MQ0=0;MQRankSum=-3.109;QD=39.25;ReadPosRankSum=4.255;VQSLOD=3.9398;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,47:49:99:1797,120,0	1/1:0,12:12:27.09:405,27,0	0/0:25,0:25:59.73:0,60,747	0/0:20,0:21:32.36:0,32,515	1/1:0,17:17:51.17:764,51,0	1/1:0,41:41:99:1753,117,0	1/1:2,31:33:75.25:1122,75,0	0/0:37,0:37:99:0,108,1337	0/0:30,0:30:90.28:0,90,1116	0/0:31,0:31:93.29:0,93,1144	0/0:18,0:18:54.17:0,54,669	0/0:33,0:33:99:0,99,1189	0/0:24,0:24:71.70:0,72,851	0/0:38,0:38:99:0,108,1325	0/0:25,0:25:75.24:0,75,930	1/1:1,29:30:78.26:1169,78,0	1/1:3,26:29:75.25:1124,75,0	1/1:0,22:22:63.21:944,63,0	0/0:29,0:29:81.25:0,81,1000	0/0:29,0:29:75.20:0,75,901	0/0:41,0:41:99:0,117,1434	0/0:25,0:25:69.16:0,69,801	0/0:22,0:22:63.18:0,63,767	0/0:28,0:28:84.24:0,84,1025	1/1:1,19:20:57.19:853,57,0	0/0:20,0:20:51.16:0,51,628	0/0:35,0:35:99:0,105,1300	0/0:12,0:12:33.10:0,33,402
chr10	8395371	.	TG	T	8846.71	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=16.766;DP=603;FS=11.723;HRun=1;HaplotypeScore=107.7387;InbreedingCoeff=0.9989;MQ=76.62;MQ0=0;MQRankSum=-0.188;QD=37.81;ReadPosRankSum=3.675;VQSLOD=3.9932;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,51:51:99:1887,135,0	1/1:0,18:18:48.16:671,48,0	0/0:12,0:12:26.53:0,27,248	0/0:13,0:13:35.20:0,35,381	1/1:0,12:12:27.09:376,27,0	1/1:0,18:18:48.16:671,48,0	1/1:0,25:25:69.23:965,69,0	0/0:22,0:22:63.11:0,63,907	0/0:18,0:18:54.18:0,54,860	0/0:31,0:31:87.29:0,87,1368	0/0:12,0:12:30.10:0,30,473	0/0:22,0:22:66.21:0,66,1029	0/0:24,0:24:72.25:0,72,1151	0/0:26,0:26:78.27:0,78,1243	0/0:26,0:26:78.27:0,78,1244	1/1:0,17:17:48.16:671,48,0	1/1:0,37:37:99:1510,108,0	1/1:0,26:26:72.24:1007,72,0	0/0:20,0:20:57.18:0,57,856	0/0:16,0:16:39.13:0,39,623	0/0:27,0:27:81.21:0,81,1236	0/0:17,0:17:48.12:0,48,698	0/0:13,0:13:33.10:0,33,502	0/0:27,0:27:81.28:0,81,1294	1/1:0,30:30:78.24:1090,78,0	0/0:20,0:20:57.19:0,57,889	0/0:16,0:16:48.13:0,48,740	0/0:7,0:7:21.05:0,21,303
chr10	8395515	.	C	CAT	11830.79	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=4.534;DP=769;FS=5.474;HRun=0;HaplotypeScore=94.5749;InbreedingCoeff=0.9994;MQ=91.05;MQ0=0;MQRankSum=-8.467;QD=51.22;ReadPosRankSum=3.494;VQSLOD=5.4376;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,38:38:99:2085,108,0	1/1:0,7:7:21.07:405,21,0	0/0:32,0:32:92.49:0,92,1324	0/0:28,0:28:84.24:0,84,1215	1/1:0,31:31:93.32:1796,93,0	1/1:0,24:24:69.24:1333,69,0	1/1:5,19:24:50.96:940,51,0	0/0:22,0:22:60.20:0,60,901	0/0:23,0:23:63.19:0,63,921	0/0:29,0:29:87.26:0,87,1306	0/0:29,0:29:81.28:0,81,1238	0/0:31,0:31:90.25:0,90,1331	0/0:33,0:33:99:0,99,1511	0/0:33,0:33:90.27:0,90,1335	0/0:34,0:34:99:0,99,1491	1/1:1,31:32:84.29:1622,84,0	1/1:1,24:25:57.20:1101,57,0	1/1:2,21:23:57.20:1101,57,0	0/0:20,0:20:60.18:0,60,880	0/0:43,0:43:99:0,117,1771	0/0:28,0:28:84.27:0,84,1266	0/0:27,0:27:81.26:0,81,1219	0/0:24,0:24:72.08:0,72,1068	0/0:33,0:33:96.28:0,96,1444	1/1:0,25:26:75.26:1449,75,0	0/0:28,0:28:81.27:0,81,1222	0/0:26,0:26:75.25:0,75,1146	0/0:15,0:15:45.15:0,45,689
chr10	8397488	.	G	GTCCA	148.09	PASS	AB=0.922;AC=6;AF=0.111;AN=54;BaseQRankSum=1.634;DP=299;FS=5.325;HRun=0;HaplotypeScore=65.3306;InbreedingCoeff=0.0694;MQ=51.21;MQ0=1;MQRankSum=-1.852;QD=2.21;ReadPosRankSum=-0.208;VQSLOD=0.9924;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:9.03:0,9,176	0/0:6,0:6:3.01:0,3,59	0/0:12,0:11:30.10:0,30,525	0/0:12,0:11:27.09:0,27,512	0/0:18,2:21:9.03:0,9,153	0/0:13,1:14:0:0,0,0	0/0:12,0:12:5.80:0,6,82	0/1:13,1:14:53.45:53,0,382	0/0:10,0:10:3.01:0,3,47	0/0:11,0:11:30.06:0,30,487	0/0:11,0:11:3.01:0,3,43	0/0:4,2:6:0.47:0,0,1	0/0:11,0:11:2.97:0,3,47	1/1:11,0:11:0.94:1,1,0	0/0:8,0:8:3.01:0,3,59	0/1:20,0:20:0:0,0,1	0/0:5,0:5:3.01:0,3,39	0/0:5,0:5:12.04:0,12,183	0/1:8,2:10:99:140,0,334	0/0:10,1:10:2.99:0,3,24	0/0:10,1:12:11.66:0,12,179	./.	0/0:9,0:9:3.01:0,3,59	0/0:8,0:8:6.02:0,6,117	0/0:12,0:12:0.47:0,0,1	0/1:11,1:12:47.47:47,0,451	0/0:10,0:10:5.98:0,6,112	0/0:4,0:4:3.01:0,3,55
chr10	8399206	.	AG	A	7476.10	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=14.348;DP=710;FS=24.431;HRun=2;HaplotypeScore=65.4844;InbreedingCoeff=0.9999;MQ=83.63;MQ0=0;MQRankSum=-2.595;QD=33.83;ReadPosRankSum=4.994;VQSLOD=2.9625;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,49:49:99:1692,132,0	1/1:0,12:12:36.12:467,36,0	0/0:18,0:18:54.12:0,54,760	0/0:22,0:22:62.90:0,63,800	1/1:1,25:26:69.22:885,69,0	1/1:0,25:25:72.23:930,72,0	1/1:0,22:22:54.18:700,54,0	0/0:33,0:33:99:0,99,1330	0/0:26,0:26:78.17:0,78,1100	0/0:23,0:23:66.20:0,66,934	0/0:15,0:15:45.14:0,45,655	0/0:21,0:21:63.20:0,63,921	0/0:32,0:32:96.29:0,96,1378	0/0:35,0:35:99:0,105,1537	0/0:35,0:35:99:0,102,1489	1/1:1,25:26:66.21:856,66,0	1/1:1,28:29:63.20:817,63,0	1/1:0,11:11:30.10:389,30,0	0/0:24,0:24:66.18:0,66,927	0/0:30,0:30:87.28:0,87,1280	0/0:31,0:31:93.30:0,93,1368	0/0:24,0:24:72.23:0,72,1054	0/0:12,0:12:36.11:0,36,516	0/0:29,0:29:84.27:0,84,1237	1/1:0,21:21:57.19:739,57,0	0/0:29,0:29:84.25:0,84,1181	0/0:27,0:27:78.18:0,78,1081	0/0:23,0:23:69.23:0,69,1032
chr10	8399433	.	TC	T	5985.64	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=12.617;DP=618;FS=2.300;HRun=6;HaplotypeScore=61.8874;InbreedingCoeff=0.9619;MQ=74.81;MQ0=0;MQRankSum=-6.186;QD=25.69;ReadPosRankSum=-0.156;VQSLOD=4.9333;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:81.17:0,81,1021	0/0:9,0:9:24.05:0,24,298	0/0:27,0:26:60.61:0,61,803	0/0:23,0:21:53.74:0,54,658	0/0:29,0:29:78.25:0,78,1023	0/0:19,0:19:57.19:0,57,750	0/0:17,0:17:48.16:0,48,631	1/1:5,22:27:66.15:702,66,0	0/0:18,0:18:54.18:0,54,711	0/0:28,0:28:78.24:0,78,1002	0/0:20,0:20:57.17:0,57,736	1/1:2,15:17:45.11:484,45,0	1/1:2,22:24:57.14:613,57,0	1/1:2,24:26:63.16:677,63,0	0/0:24,0:24:72.20:0,72,903	0/0:21,0:21:63.20:0,63,829	0/0:24,0:24:66.21:0,66,866	0/0:10,0:10:30.10:0,30,395	1/1:5,16:21:48.07:496,48,0	1/1:1,29:30:81.20:868,81,0	1/1:1,15:16:45.11:484,45,0	0/0:32,0:32:93.27:0,93,1203	0/0:18,0:18:51.16:0,51,657	0/0:13,0:13:39.13:0,39,513	0/0:24,0:24:69.20:0,69,889	1/1:4,24:28:0.36:696,0,0	1/1:2,18:20:51.13:548,51,0	1/1:2,22:24:39.10:419,39,0
chr10	8400305	.	AAGAAG	A	10432.93	PASS	AB=0.571;AC=19;AF=0.339;AN=56;BaseQRankSum=6.184;DP=776;FS=0.000;HRun=0;HaplotypeScore=181.0160;InbreedingCoeff=0.9216;MQ=80.28;MQ0=0;MQRankSum=-12.947;QD=38.93;ReadPosRankSum=-1.063;VQSLOD=4.4470;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:75.24:0,75,2047	0/0:10,0:10:27.09:0,27,803	0/0:39,0:38:87.21:0,87,1827	0/0:26,0:23:42.12:0,42,958	0/0:34,0:34:84.26:0,84,2279	0/0:36,0:36:99:0,102,2912	0/0:27,0:27:63.20:0,63,1755	1/1:4,29:33:84.21:1414,84,0	0/0:24,0:24:60.19:0,60,1714	0/0:31,0:31:87.28:0,87,2331	0/0:14,0:14:39.12:0,39,1022	1/1:3,19:22:51.04:941,51,0	1/1:4,26:30:69.20:1279,69,0	1/1:4,28:32:69.24:1338,69,0	0/0:45,0:45:99:0,120,3487	0/0:33,0:33:78.25:0,78,2155	0/0:31,0:31:81.25:0,81,2256	0/0:23,0:23:57.19:0,57,1599	1/1:3,13:16:39.13:721,39,0	1/1:0,38:38:86.78:1206,87,0	1/1:8,10:18:17.24:275,17,0	0/0:27,0:27:72.25:0,72,2098	0/0:19,0:19:45.14:0,45,1220	0/0:38,0:38:93.30:0,93,2658	0/0:22,0:22:60.19:0,60,1644	0/1:8,24:32:13.85:1289,0,14	1/1:4,31:35:78.18:1495,78,0	1/1:3,9:12:24.08:473,24,0
chr10	8402254	.	TA	T	13341.89	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-3.094;DP=641;FS=7.937;HRun=9;HaplotypeScore=107.3356;InbreedingCoeff=0.9954;MQ=78.86;MQ0=0;MQRankSum=-8.295;QD=22.73;ReadPosRankSum=6.691;VQSLOD=4.0350;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,19:22:59.07:528,59,0	1/1:1,11:12:30.01:275,30,0	0/0:33,0:29:67.33:0,67,695	0/0:21,0:18:32.79:0,33,310	1/1:1,26:27:75.03:686,75,0	1/1:2,25:27:72.03:659,72,0	1/1:2,13:15:33.01:302,33,0	1/1:9,26:35:77.97:695,78,0	1/1:2,18:20:45.02:412,45,0	1/1:3,30:33:90.04:823,90,0	1/1:1,25:27:74.03:656,74,0	1/1:3,21:24:43.44:529,43,0	1/1:2,19:21:45.02:412,45,0	1/1:5,30:35:84.04:769,84,0	1/1:3,23:26:60.03:549,60,0	1/1:2,17:19:51.03:467,51,0	1/1:2,21:22:60.03:549,60,0	1/1:0,18:18:48.03:439,48,0	1/1:4,13:17:36.01:329,36,0	1/1:2,24:26:72:651,72,0	1/1:3,5:10:19.07:149,19,0	1/1:1,24:26:68.98:623,69,0	1/1:0,21:21:48.03:439,48,0	1/1:1,13:14:39.02:357,39,0	1/1:1,25:26:34.42:569,34,0	1/1:3,23:26:69.01:625,69,0	1/1:0,24:24:66.04:604,66,0	1/1:1,12:13:27.01:247,27,0
chr10	8403323	.	CACACACACAT	C	3729.94	PASS	AB=1.000;AC=38;AF=0.679;AN=56;BaseQRankSum=-7.569;DP=636;FS=5.176;HRun=0;HaplotypeScore=159.7225;InbreedingCoeff=0.0517;MQ=50.11;MQ0=17;MQRankSum=-0.069;QD=7.27;ReadPosRankSum=-4.838;VQSLOD=0.8695;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:24,2:25:4.48:493,4,0	1/1:6,0:6:7.11:45,7,0	0/1:31,0:6:9.92:26,0,10	0/0:47,0:10:3.93:0,4,171	0/1:10,0:10:0:0,0,0	1/1:17,0:17:0.94:2,1,0	1/1:24,2:26:1.47:109,1,0	1/1:20,0:20:2.69:199,3,0	0/1:25,0:25:46.24:46,0,599	1/1:26,0:26:74.70:751,75,0	1/1:2,10:12:5.93:53,6,0	0/1:20,0:20:33.68:162,0,34	0/1:19,0:19:72.84:73,0,142	0/1:26,0:26:53.38:53,0,252	1/1:3,19:22:11.81:243,12,0	0/1:23,0:23:1.57:41,0,2	1/1:37,1:38:36.18:441,36,0	1/1:33,0:33:2.22:181,2,0	0/1:13,0:13:63.71:123,0,64	0/0:8,0:8:5.93:0,6,40	0/0:54,0:52:9.03:0,9,121	1/1:7,12:19:12.21:140,12,0	1/1:12,2:14:21.79:169,22,0	1/1:36,1:37:3.27:94,3,0	1/1:9,0:9:17.99:163,18,0	0/1:34,0:31:99:104,0,301	0/0:13,0:13:6.95:0,7,132	0/1:7,0:7:19.63:20,0,74
chr10	8403325	.	CACACACAT	C	4824.96	PASS	AB=0.923;AC=41;AF=0.732;AN=56;BaseQRankSum=-6.409;DP=634;FS=0.631;HRun=0;HaplotypeScore=141.5857;InbreedingCoeff=-0.0214;MQ=50.02;MQ0=19;MQRankSum=1.131;QD=8.44;ReadPosRankSum=-5.224;VQSLOD=1.6418;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:25,1:25:53.22:555,53,0	1/1:3,3:6:10.84:147,11,0	0/1:32,0:6:9.92:26,0,10	0/1:47,0:9:3.03:3,0,103	0/1:3,7:10:0:0,0,0	1/1:4,13:17:6:61,6,0	1/1:8,17:25:11.42:88,11,0	1/1:18,0:18:37.14:252,37,0	0/1:25,0:25:94.07:94,0,391	1/1:26,0:26:75.58:658,76,0	1/1:12,0:12:5.83:33,6,0	1/1:21,0:21:31.51:278,32,0	0/1:19,0:19:45.99:137,0,46	0/1:26,0:26:59.70:106,0,60	1/1:21,0:21:11.73:158,12,0	1/1:4,17:21:8.14:170,8,0	1/1:34,3:37:64.88:732,65,0	0/1:7,26:33:6.26:421,0,6	0/1:14,0:14:24.98:143,0,25	0/0:8,0:8:0:0,0,0	0/0:54,0:52:8.52:0,9,42	1/1:19,0:19:11.73:87,12,0	1/1:14,0:14:21.68:149,22,0	1/1:6,31:37:5.87:77,6,0	1/1:9,1:10:17.92:143,18,0	0/1:35,0:32:99:134,0,126	0/1:14,0:14:30.07:92,0,30	0/1:7,0:7:23.06:82,0,23
chr10	8403327	.	CACACAT	C	5144.54	PASS	AB=1.000;AC=52;AF=0.929;AN=56;BaseQRankSum=-3.446;DP=629;FS=3.490;HRun=0;HaplotypeScore=126.6344;InbreedingCoeff=0.0916;MQ=49.64;MQ0=20;MQRankSum=4.040;QD=8.18;ReadPosRankSum=-3.483;VQSLOD=2.6593;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:24:53.01:449,53,0	1/1:6,0:6:14.81:115,15,0	0/1:34,0:6:9.92:26,0,10	0/1:49,0:9:15.01:15,0,100	0/1:9,0:9:0:0,0,0	1/1:15,1:16:4.17:20,4,0	1/1:24,0:24:8.21:41,8,0	1/1:17,0:17:42.44:290,42,0	0/1:25,0:25:99:155,0,219	1/1:26,0:26:73.41:631,73,0	1/1:11,0:11:5.83:33,6,0	1/1:21,0:21:37.31:352,37,0	1/1:19,1:20:34.45:301,34,0	1/1:24,3:27:38.49:347,38,0	1/1:20,0:20:11.68:130,12,0	1/1:19,0:19:5.18:74,5,0	1/1:38,0:38:58.32:501,58,0	1/1:33,0:33:4.14:245,4,0	1/1:15,0:14:28.39:227,28,0	1/1:8,0:8:0.85:2,1,0	1/1:54,0:52:8.23:36,8,0	1/1:18,0:18:11.03:70,11,0	1/1:14,0:14:23.84:171,24,0	1/1:35,0:36:5.56:64,6,0	1/1:10,0:10:17.92:143,18,0	1/1:32,0:30:32.55:291,33,0	1/1:14,1:15:32.58:262,33,0	1/1:7,0:7:14.58:154,15,0
chr10	8403329	.	CACAT	C	6103.50	PASS	AB=0.990;AC=52;AF=0.929;AN=56;BaseQRankSum=-3.141;DP=627;FS=3.698;HRun=0;HaplotypeScore=111.0985;InbreedingCoeff=0.0225;MQ=49.32;MQ0=20;MQRankSum=3.870;QD=9.73;ReadPosRankSum=-2.445;VQSLOD=3.2196;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:25:53.01:432,53,0	1/1:6,0:6:14.79:101,15,0	0/1:34,0:5:9.92:26,0,10	0/1:51,0:12:24.01:24,0,115	0/1:9,0:9:0:0,0,0	1/1:15,0:15:5.89:37,6,0	1/1:22,0:22:8.81:53,9,0	1/1:17,0:17:44.55:316,45,0	0/1:23,1:24:93.79:211,0,94	1/1:27,0:27:79.73:670,80,0	1/1:11,0:11:5.83:33,6,0	1/1:23,0:23:46.70:410,47,0	1/1:19,2:21:41.78:389,42,0	1/1:26,1:27:49.78:484,50,0	1/1:20,0:20:11.75:102,12,0	1/1:18,0:18:5.44:53,5,0	1/1:39,0:39:66.78:545,67,0	1/1:31,0:31:6.75:178,7,0	1/1:14,0:13:35.80:280,36,0	1/1:0,8:8:5.96:73,6,0	1/1:4,49:51:9.03:170,9,0	1/1:18,0:18:11.42:83,11,0	1/1:14,0:14:23.84:171,24,0	1/1:35,0:35:5.72:50,6,0	1/1:10,0:10:17.92:143,18,0	1/1:3,28:29:51.76:532,52,0	1/1:14,0:14:41.01:343,41,0	1/1:7,1:8:9.94:197,10,0
chr10	8404570	.	G	GCA	19957.36	PASS	AB=0.593;AC=36;AF=0.643;AN=56;BaseQRankSum=-16.279;DP=946;FS=5.585;HRun=0;HaplotypeScore=96.1569;InbreedingCoeff=0.6740;MQ=62.76;MQ0=7;MQRankSum=-0.708;QD=30.28;ReadPosRankSum=0.787;VQSLOD=6.7448;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,38:45:93.32:1508,93,0	0/1:3,9:12:32.13:359,0,32	0/0:40,0:27:34.93:0,35,342	0/0:37,0:28:33.06:0,33,362	1/1:3,35:39:74.54:1661,75,0	1/1:5,19:25:51.17:828,51,0	1/1:10,25:37:42.14:682,42,0	1/1:16,19:35:23.57:845,24,0	1/1:7,32:38:11.15:1175,11,0	0/0:37,0:37:90.27:0,90,1092	0/0:26,0:26:66.13:0,66,747	1/1:8,27:34:7.75:1142,8,0	1/1:6,26:32:26.72:922,27,0	1/1:11,38:49:1.37:1545,1,0	0/0:37,0:36:90.24:0,90,1083	1/1:5,23:28:69.23:1093,69,0	1/1:5,19:23:48.16:779,48,0	1/1:6,21:27:14.51:742,15,0	1/1:9,15:26:20.45:743,20,0	0/1:10,26:36:25.78:1091,0,26	0/1:20,34:52:13.75:1285,0,14	0/0:30,0:30:75.24:0,75,917	0/0:24,0:25:54:0,54,637	0/0:52,0:54:99:0,126,1500	1/1:2,24:27:60.20:974,60,0	0/1:12,21:34:1.13:947,0,1	1/1:4,30:34:30.46:1166,30,0	1/1:7,12:19:30.10:472,30,0
chr10	8406203	.	CT	C	16012.44	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=2.226;DP=653;FS=8.271;HRun=6;HaplotypeScore=135.4062;InbreedingCoeff=0.9931;MQ=77.84;MQ0=0;MQRankSum=-6.039;QD=26.51;ReadPosRankSum=5.915;VQSLOD=3.1116;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,38:35:99:1034,99,0	1/1:0,7:7:21.05:227,21,0	0/0:22,1:20:45.09:0,45,536	0/0:25,0:21:48.09:0,48,589	1/1:4,22:26:60.04:618,60,0	1/1:1,22:23:57.14:612,57,0	1/1:5,21:25:60.15:645,60,0	1/1:0,25:25:75.15:783,75,0	1/1:0,25:24:69.14:730,69,0	1/1:2,27:28:78.10:800,78,0	1/1:2,10:12:30.07:322,30,0	1/1:0,22:22:54.14:580,54,0	1/1:5,23:27:60.15:646,60,0	1/1:1,15:15:36.09:388,36,0	1/1:1,24:22:54.13:580,54,0	1/1:2,30:26:69.09:730,69,0	1/1:0,25:23:66.17:709,66,0	1/1:1,13:12:30.08:322,30,0	1/1:4,25:28:72.16:759,72,0	1/1:1,18:19:51.11:539,51,0	1/1:2,36:37:96.24:1032,96,0	1/1:3,17:20:47.22:489,47,0	1/1:0,15:15:44.94:452,45,0	1/1:1,27:26:62.94:647,63,0	1/1:0,24:24:69.17:739,69,0	1/1:3,28:31:84.21:902,84,0	1/1:2,19:21:51.12:546,51,0	1/1:1,5:6:18.01:182,18,0
chr10	8406227	.	AGTGTGT	A	1815.12	PASS	AB=1.000;AC=15;AF=0.278;AN=54;BaseQRankSum=0.575;DP=714;FS=2.145;HRun=0;HaplotypeScore=267.3774;InbreedingCoeff=0.8232;MQ=55.12;MQ0=23;MQRankSum=-7.046;QD=9.76;ReadPosRankSum=-1.641;VQSLOD=2.4918;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:43:64.69:0,65,1131	0/0:7,0:8:8.53:0,9,159	0/0:23,0:8:0.47:0,0,1	./.	0/0:21,0:27:26.96:0,27,542	0/0:22,0:26:28.97:0,29,493	0/0:20,0:25:21.05:0,21,385	0/0:32,0:31:16.22:0,16,170	1/1:15,5:23:15.52:286,16,0	1/1:14,9:24:34.05:589,34,0	1/1:10,6:16:12.41:144,12,0	0/0:21,0:21:24.08:0,24,474	0/0:26,0:25:33.31:0,33,575	0/0:21,0:18:22.32:0,22,402	1/1:12,12:20:23.96:408,24,0	0/0:23,0:26:27.06:0,27,584	0/0:27,0:28:39.09:0,39,795	0/0:13,0:12:18.03:0,18,336	0/0:29,0:24:18.01:0,18,246	0/0:24,0:24:27.09:0,27,505	0/0:38,0:32:44.95:0,45,791	1/1:7,9:16:12.03:211,12,0	1/1:7,10:19:18.45:292,18,0	1/1:23,5:24:2.98:62,3,0	0/0:27,0:31:35.77:0,36,677	0/1:32,0:32:8.91:9,0,638	0/0:26,0:26:24.90:0,25,602	0/0:9,0:9:14.98:0,15,228
chr10	8406228	.	G	GTA	8168.77	PASS	AB=1.000;AC=41;AF=0.732;AN=56;BaseQRankSum=-5.627;DP=721;FS=14.977;HRun=0;HaplotypeScore=208.4850;InbreedingCoeff=0.0049;MQ=54.97;MQ0=24;MQRankSum=2.755;QD=12.23;ReadPosRankSum=1.978;VQSLOD=3.1628;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:45,2:43:31.01:669,31,0	1/1:6,1:7:18.01:229,18,0	0/0:23,0:8:14.38:0,14,118	0/0:30,0:10:20.99:0,21,189	1/1:24,4:28:6.11:409,6,0	1/1:27,1:27:37.39:491,37,0	1/1:24,1:25:53.89:505,54,0	1/1:33,0:32:31:502,31,0	1/1:24,0:23:38.18:306,38,0	1/1:26,0:25:37.50:413,37,0	0/1:16,0:16:34.80:127,0,35	0/1:20,0:20:6.12:151,0,6	0/1:27,0:25:29.30:181,0,29	0/1:23,0:19:52.64:80,0,53	0/1:24,0:20:35.35:175,0,35	1/1:31,2:25:53.12:521,53,0	1/1:29,2:28:44.85:719,45,0	1/1:13,3:13:2.28:174,2,0	1/1:29,0:24:49.41:494,49,0	0/1:25,0:25:30.13:163,0,30	0/1:41,0:34:0.95:299,0,1	0/1:17,0:16:20.54:38,0,21	0/1:19,0:19:9.31:129,0,9	1/1:29,0:24:28.47:217,28,0	1/1:31,2:31:30.18:484,30,0	1/1:32,0:32:35.98:442,36,0	0/1:26,0:26:10.49:214,0,10	0/1:9,0:9:37.02:37,0,43
chr10	8406261	.	TGTGC	T	1968.73	PASS	AB=0.981;AC=19;AF=0.339;AN=56;BaseQRankSum=-1.685;DP=671;FS=10.207;HRun=0;HaplotypeScore=188.0951;InbreedingCoeff=-0.3526;MQ=45.68;MQ0=35;MQRankSum=-2.033;QD=4.93;ReadPosRankSum=2.792;VQSLOD=1.5060;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:41:70.34:0,70,840	0/1:5,0:5:4.86:5,0,133	0/0:23,0:1:2.84:0,3,14	0/0:24,0:1:0.47:0,0,1	0/0:27,0:27:29.09:0,29,503	0/0:27,0:26:41.58:0,42,426	0/0:24,0:19:18.03:0,18,307	0/1:23,0:21:39.85:178,0,40	0/1:18,0:14:42.90:65,0,43	0/1:22,0:21:84.06:84,0,144	0/0:15,0:15:12.56:0,13,166	0/1:22,0:22:87.72:179,0,88	0/1:23,4:26:38.02:377,0,38	0/1:25,0:21:37.82:168,0,38	0/1:26,0:22:25.48:25,0,274	0/0:25,0:17:33.06:0,33,489	0/0:29,0:26:57.60:0,58,678	0/1:17,0:14:8:8,0,307	1/1:15,2:10:2.71:130,3,0	0/1:24,3:27:24.74:172,0,25	0/1:45,1:36:80.38:204,0,80	0/1:23,0:22:3.85:4,0,163	0/1:20,0:20:27.15:27,0,97	0/1:24,0:18:4.46:4,0,59	0/0:30,0:28:22.47:0,22,478	0/1:23,1:23:85.58:251,0,86	0/1:23,1:24:72.02:211,0,72	0/1:9,0:8:9.50:28,0,10
chr10	8406263	.	TGC	T	3566.58	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=-1.973;DP=661;FS=14.967;HRun=0;HaplotypeScore=164.0580;InbreedingCoeff=0.7457;MQ=45.47;MQ0=34;MQRankSum=-0.858;QD=12.83;ReadPosRankSum=0.215;VQSLOD=2.8109;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:39:59.77:0,60,483	0/1:5,0:5:5.86:6,0,57	0/0:24,0:1:2.84:0,3,14	0/0:20,0:1:0.47:0,0,1	0/0:27,0:27:23:0,23,296	0/0:26,0:25:21.70:0,22,202	0/0:23,0:18:17.79:0,18,215	1/1:5,16:20:17.41:238,17,0	0/1:18,0:14:4.86:5,0,60	0/0:22,0:21:26.59:0,27,229	0/0:15,0:15:24.62:0,25,208	1/1:20,2:22:44.87:386,45,0	1/1:24,4:27:65.37:573,65,0	1/1:18,6:20:38.45:363,38,0	0/0:27,0:23:41.70:0,42,378	0/0:24,0:16:28.06:0,28,262	0/0:28,0:26:47.49:0,47,431	0/1:18,0:15:20.04:20,0,210	1/1:16,0:9:23.92:192,24,0	1/1:23,3:26:47.85:433,48,0	1/1:46,1:36:61.78:483,62,0	0/0:23,0:22:26.09:0,26,217	0/0:20,0:20:19.93:0,20,161	0/0:25,0:18:6.99:0,7,68	0/0:29,0:27:16.75:0,17,254	1/1:22,0:21:38.66:314,39,0	1/1:17,5:22:31.39:398,31,0	1/1:6,3:8:14.83:155,15,0
chr10	8406269	.	CGT	C	434.17	PASS	AB=0.992;AC=16;AF=0.286;AN=56;BaseQRankSum=3.061;DP=667;FS=16.168;HRun=0;HaplotypeScore=165.1010;InbreedingCoeff=0.0771;MQ=45.83;MQ0=26;MQRankSum=1.219;QD=1.47;ReadPosRankSum=3.186;VQSLOD=1.4922;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:38:57.59:0,58,705	0/0:8,0:8:15.01:0,15,153	0/0:27,0:1:3.01:0,3,33	0/0:27,0:1:0.47:0,0,1	0/0:24,0:24:0.72:0,1,381	0/0:24,0:23:26.82:0,27,316	0/1:22,0:17:11.65:12,0,287	0/1:23,0:22:14.52:15,0,148	0/1:20,1:17:1.37:1,0,224	0/0:22,0:21:38.92:0,39,482	0/0:15,0:15:29.96:0,30,398	0/1:20,0:20:29.41:84,0,29	1/1:24,1:24:16.94:162,17,0	0/1:24,0:20:32.48:81,0,32	0/0:32,0:28:74.77:0,75,886	0/0:22,0:15:27.51:0,28,356	0/0:29,0:26:27.16:0,27,566	0/0:19,0:16:27.53:0,28,350	0/1:14,0:10:4.43:4,0,20	0/1:26,1:27:17.49:35,0,17	0/1:46,0:35:17.56:18,0,63	0/0:27,0:27:45.43:0,45,518	0/0:22,0:22:35.75:0,36,376	0/0:26,1:20:16.91:0,17,216	0/1:27,0:25:0.32:0,0,349	1/1:17,0:16:0.13:7,0,0	0/1:20,0:20:69.53:109,0,70	1/1:9,0:8:8.79:55,9,0
chr10	8411235	.	TTCTCTCTC	T	1263.18	PASS	AB=0.969;AC=22;AF=0.423;AN=52;BaseQRankSum=-0.488;DP=701;FS=10.181;HRun=0;HaplotypeScore=195.5153;InbreedingCoeff=0.1355;MQ=51.16;MQ0=17;MQRankSum=2.973;QD=3.57;ReadPosRankSum=1.455;VQSLOD=1.2990;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:15,12:24:0.47:0,0,1	0/1:5,0:8:0:0,0,0	./.	./.	1/1:18,1:20:8.92:63,9,0	1/1:15,1:25:3.01:54,3,0	1/1:22,1:23:6.47:98,6,0	0/0:45,0:45:14.97:0,15,181	0/0:27,0:27:10.97:0,11,313	0/0:27,0:27:24.08:0,24,672	0/0:27,0:26:9.50:0,10,200	0/0:37,0:37:23.61:0,24,378	0/1:33,0:32:99:147,0,349	0/1:36,0:35:11.24:11,0,257	0/0:35,0:34:21.40:0,21,696	0/0:19,0:24:3.72:0,4,39	1/1:11,0:11:6.02:137,6,0	1/1:11,0:8:6.02:132,6,0	0/1:24,0:24:50.67:51,0,129	0/1:24,0:24:4.52:5,0,33	0/0:34,0:29:8.87:0,9,243	0/1:29,0:29:50.75:51,0,295	0/1:24,0:23:23.26:23,0,134	0/1:22,0:21:43.84:44,0,443	1/1:19,1:23:24.55:532,25,0	0/1:19,0:19:37.96:38,0,198	0/0:31,0:31:21.62:0,22,537	0/1:19,0:19:38.69:39,0,47
chr10	8411278	.	TCTCTCACACA	T	3806.60	PASS	AB=0.996;AC=27;AF=0.519;AN=52;BaseQRankSum=3.973;DP=592;FS=28.755;HRun=0;HaplotypeScore=218.7666;InbreedingCoeff=-0.1246;MQ=36.67;MQ0=55;MQRankSum=-3.035;QD=8.33;ReadPosRankSum=-1.792;VQSLOD=1.2219;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:28:1.36:0,1,3	1/1:11,0:8:2.60:37,3,0	./.	./.	1/1:22,0:20:2.97:20,3,0	0/1:28,0:27:42.93:43,0,54	0/1:21,0:16:20.37:20,0,30	1/1:25,0:23:33.50:750,33,0	0/1:20,0:20:11.72:12,0,180	0/0:17,0:15:24.15:0,24,372	0/0:11,0:10:6.48:0,6,63	0/1:27,0:25:54.98:121,0,55	0/1:35,0:33:29.10:621,0,29	0/1:32,0:32:17.52:303,0,18	0/0:29,0:28:19.09:0,19,368	1/1:25,0:24:8.68:89,9,0	0/1:21,0:14:19.92:105,0,20	0/1:12,0:5:22.91:30,0,23	0/1:11,0:11:3.78:199,0,4	0/0:7,12:18:0.28:0,0,0	0/0:25,0:19:8.20:0,8,120	0/1:30,0:27:31.49:31,0,94	0/1:18,0:17:31.59:32,0,40	0/1:33,0:26:56.99:57,0,232	1/1:28,0:26:20.05:183,20,0	1/1:17,0:16:14.58:474,15,0	0/1:33,0:30:9.84:533,0,10	1/1:6,0:6:7.13:146,7,0
chr10	8411282	.	TCACACA	T	2849.43	PASS	AB=0.874;AC=25;AF=0.521;AN=48;BaseQRankSum=1.804;DP=591;FS=68.654;HRun=0;HaplotypeScore=204.4310;InbreedingCoeff=0.0380;MQ=36.67;MQ0=51;MQRankSum=-4.727;QD=7.60;ReadPosRankSum=-3.230;VQSLOD=-0.2305;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	1/1:10,0:8:3.01:38,3,0	./.	./.	0/0:23,0:21:2.53:0,3,15	0/1:29,0:28:27.16:27,0,58	0/0:20,0:16:4.58:0,5,36	1/1:6,21:25:62.87:878,63,0	0/1:18,1:19:12:12,0,47	0/0:15,0:13:7.57:0,8,85	1/1:9,0:8:0.47:1,0,0	1/1:15,8:24:8.64:131,9,0	0/1:22,12:32:11.55:423,0,12	0/1:24,9:32:6.93:211,0,7	0/1:29,0:28:1.19:1,0,14	1/1:25,0:24:10.68:92,11,0	0/1:24,0:17:34.57:63,0,35	0/0:13,0:6:6.93:0,7,43	0/1:11,1:12:24.41:136,0,24	1/1:17,2:18:0.47:1,0,0	1/1:22,2:19:1.63:6,2,0	0/0:30,0:27:3.46:0,3,25	./.	0/0:33,0:26:10.71:0,11,51	0/0:30,0:28:4.48:0,4,21	0/1:10,7:16:44.89:437,0,45	0/1:22,9:29:13.28:420,0,13	1/1:3,3:6:6.02:113,6,0
chr10	8411333	.	CACACACACACACACAA	C	3228.29	PASS	AB=0.943;AC=26;AF=0.542;AN=48;BaseQRankSum=3.446;DP=681;FS=12.280;HRun=0;HaplotypeScore=253.2715;InbreedingCoeff=0.2166;MQ=51.09;MQ0=28;MQRankSum=-0.083;QD=7.34;ReadPosRankSum=3.685;VQSLOD=0.3639;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	1/1:10,0:9:3.48:35,3,0	0/0:16,0:10:14.94:0,15,352	0/0:9,0:1:2.99:0,3,23	1/1:31,0:30:0.47:1,0,0	0/0:23,0:23:13.69:0,14,73	0/1:20,0:20:2.71:3,0,100	0/0:38,0:36:63.86:0,64,489	1/1:32,0:32:4.60:121,5,0	1/1:2,25:26:56.43:1203,56,0	./.	0/1:28,0:27:29.30:29,0,145	1/1:26,0:26:7.68:459,8,0	0/1:27,0:27:81.31:277,0,81	1/1:3,34:37:11.40:293,11,0	1/1:30,0:30:5.96:50,6,0	1/1:27,0:23:6:55,6,0	0/0:9,0:4:1.03:0,1,3	0/0:16,0:16:6.29:0,6,92	0/0:17,0:17:20.59:0,21,156	0/1:22,0:21:1.86:2,0,25	./.	0/1:3,17:19:0.16:1,0,0	1/1:9,24:29:0.47:1,0,0	./.	0/1:30,0:30:99:398,0,323	0/1:27,0:24:99:314,0,134	0/1:13,0:13:99:133,0,139
chr10	8411337	.	CACACACACACAA	C	11023.93	PASS	AB=0.780;AC=42;AF=0.875;AN=48;BaseQRankSum=-2.533;DP=664;FS=0.891;HRun=0;HaplotypeScore=199.7927;InbreedingCoeff=0.4896;MQ=53.34;MQ0=25;MQRankSum=2.381;QD=20.92;ReadPosRankSum=5.381;VQSLOD=3.5148;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	1/1:1,9:9:3.01:109,3,0	0/0:18,0:12:25.61:0,26,315	0/0:10,0:2:6.02:0,6,70	1/1:7,20:27:2.92:17,3,0	1/1:23,0:23:32.61:635,33,0	1/1:23,0:23:51.08:838,51,0	1/1:38,0:36:9.03:1164,9,0	1/1:1,28:29:4.82:185,5,0	1/1:26,0:25:34.04:408,34,0	./.	1/1:21,4:24:51.15:968,51,0	1/1:5,21:26:22.24:722,22,0	1/1:18,6:24:36.09:777,36,0	1/1:36,0:36:8.55:116,9,0	1/1:1,32:33:15.05:423,15,0	1/1:6,21:23:6.02:205,6,0	1/1:8,0:4:6.02:79,6,0	1/1:14,0:14:39.04:596,39,0	1/1:15,2:17:30.10:524,30,0	1/1:21,0:20:13.41:310,13,0	./.	0/1:19,0:18:0:1,0,0	1/1:30,0:27:0.47:1,0,0	./.	0/1:7,26:33:27.25:1382,0,27	1/1:19,6:23:47:996,47,0	1/1:10,3:13:24.23:567,24,0
chr10	8411953	.	AT	A	4829.64	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=13.488;DP=741;FS=4.492;HRun=6;HaplotypeScore=71.1956;InbreedingCoeff=0.9999;MQ=85.24;MQ0=0;MQRankSum=-0.785;QD=29.27;ReadPosRankSum=2.548;VQSLOD=5.7349;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:93.30:0,93,1222	0/0:18,0:18:54.18:0,54,711	0/0:27,0:27:72.22:0,72,892	0/0:20,0:20:44.89:0,45,516	0/0:33,0:33:96.30:0,96,1248	0/0:24,0:23:69.22:0,69,907	0/0:18,0:18:48.13:0,48,601	0/0:44,0:44:99:0,120,1579	0/0:35,0:35:96.28:0,96,1229	1/1:3,30:33:90.21:960,90,0	1/1:1,32:33:90.22:967,90,0	0/0:24,0:24:63.20:0,63,827	0/0:23,0:23:69.22:0,69,907	0/0:35,0:35:99:0,105,1365	1/1:3,26:29:78.19:838,78,0	0/0:24,0:24:69.22:0,69,908	0/0:31,0:31:87.27:0,87,1129	0/0:18,0:18:54.18:0,54,708	0/0:14,0:14:33.11:0,33,434	0/0:27,0:27:81.26:0,81,1065	0/0:18,0:18:51.17:0,51,670	1/1:0,22:22:66.17:709,66,0	1/1:0,20:20:57.14:613,57,0	1/1:4,24:28:69.17:742,69,0	0/0:26,0:26:75.21:0,75,956	0/0:29,1:30:49:0,49,981	0/0:38,0:38:99:0,108,1407	0/0:17,0:17:51.17:0,51,671
chr10	8412426	.	TCAAACAAACAAACAAA	T	15716.24	PASS	AB=0.626;AC=39;AF=0.722;AN=54;BaseQRankSum=5.551;DP=596;FS=1.778;HRun=0;HaplotypeScore=262.6507;InbreedingCoeff=0.2977;MQ=51.22;MQ0=6;MQRankSum=-8.454;QD=31.56;ReadPosRankSum=6.853;VQSLOD=3.4364;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,15:25:9.03:399,9,0	1/1:4,9:13:8.58:399,9,0	0/0:19,0:11:15.05:0,15,457	0/0:29,0:20:45.11:0,45,2322	1/1:13,26:39:66.09:2077,66,0	1/1:6,10:16:12.04:532,12,0	1/1:8,7:15:5.91:266,6,0	0/0:17,0:27:51.07:0,51,699	0/0:9,0:15:24.08:0,24,969	1/1:10,20:29:51.12:1861,51,0	1/1:16,14:30:36.04:1394,36,0	0/1:7,0:13:38.87:78,0,39	0/1:9,0:22:39.48:169,0,39	1/1:3,0:22:25.11:417,25,0	1/1:7,16:23:24.08:1065,24,0	0/1:3,10:14:99:777,0,109	1/1:15,15:30:15.02:665,15,0	1/1:5,12:17:6.02:266,6,0	0/1:15,0:23:69.61:70,0,298	0/1:13,0:26:99:149,0,189	./.	1/1:8,15:23:30.10:1331,30,0	1/1:2,15:17:32.54:1315,33,0	1/1:8,4:12:3.01:133,3,0	1/1:9,15:24:27.09:1198,27,0	0/1:7,0:21:99:298,0,131	0/1:3,0:25:4.46:546,0,4	1/1:3,0:15:30.07:311,30,0
chr10	8412651	.	TCTGA	T	9661.32	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=5.982;DP=741;FS=1.016;HRun=0;HaplotypeScore=135.4742;InbreedingCoeff=0.9993;MQ=86.24;MQ0=0;MQRankSum=-4.081;QD=40.77;ReadPosRankSum=5.102;VQSLOD=5.3679;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,36:41:81.28:1453,81,0	1/1:1,7:8:24.08:424,24,0	0/0:24,0:23:57.19:0,57,1370	0/0:31,0:31:75.25:0,75,1687	1/1:2,26:28:66.23:1182,66,0	1/1:1,12:13:33.11:590,33,0	1/1:3,19:22:51.17:913,51,0	0/0:28,0:28:72.25:0,72,1781	1/1:1,19:20:51.17:917,51,0	0/0:26,0:26:75.26:0,75,1378	0/0:18,0:18:51.16:0,51,969	0/0:35,0:35:90.29:0,90,2229	0/0:35,0:35:93.28:0,93,2297	0/0:37,0:37:99:0,99,2550	0/0:29,0:29:87.30:0,87,1714	1/1:1,30:31:66.23:1186,66,0	1/1:6,35:40:90.31:1618,90,0	1/1:2,14:16:30.10:537,30,0	0/0:31,0:31:72.23:0,72,1789	0/0:36,0:36:99:0,102,2561	0/0:38,0:38:99:0,108,2754	0/0:22,0:22:63.21:0,63,1239	0/0:17,0:17:39.13:0,39,751	0/0:25,0:25:72.23:0,72,1361	1/1:2,15:17:48.16:843,48,0	0/0:30,0:30:81.28:0,81,2030	0/0:34,0:33:93.28:0,93,2257	0/0:8,0:8:24.08:0,24,603
chr10	8413192	.	C	CACTACCACCACCGCCTCT	26807.03	PASS	AB=0.583;AC=21;AF=0.375;AN=56;BaseQRankSum=-4.911;DP=783;FS=1.061;HRun=0;HaplotypeScore=310.9152;InbreedingCoeff=0.9029;MQ=75.11;MQ0=0;MQRankSum=-13.102;QD=78.61;ReadPosRankSum=-2.335;VQSLOD=3.8168;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,132,5251	0/0:14,0:14:42.14:0,42,1611	0/0:21,0:21:56.80:0,57,1856	0/0:27,0:27:72.24:0,72,2038	0/0:26,0:26:69.24:0,69,2741	0/0:21,0:21:63.20:0,63,2547	0/0:33,0:33:90.31:0,90,3898	1/1:15,0:46:99:4016,129,0	1/1:12,13:37:48.16:3282,48,0	0/0:13,0:13:33.11:0,33,1397	0/0:21,0:21:63.19:0,63,2626	1/1:10,16:33:45.15:3632,45,0	1/1:7,19:33:47.87:3406,48,0	1/1:9,23:40:45.03:3473,45,0	0/0:38,0:38:99:0,108,4368	0/0:26,0:26:69.24:0,69,2777	0/0:20,0:20:57.18:0,57,2411	0/0:26,0:25:74.26:0,74,3151	1/1:2,0:15:39.13:1259,39,0	1/1:14,7:33:39.13:1938,39,0	1/1:8,6:36:6.02:520,6,0	0/0:28,0:28:81.28:0,81,3508	0/0:20,0:20:54.19:0,54,2309	0/0:30,0:30:81.28:0,81,3697	0/0:29,0:29:84.29:0,84,3388	0/1:8,5:28:80.81:2516,0,81	1/1:4,13:23:20.91:1726,21,0	1/1:0,8:17:12.04:1040,12,0
chr10	8416192	.	AG	A	743.20	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.585;DP=743;FS=0.000;HRun=6;HaplotypeScore=70.9780;InbreedingCoeff=0.9997;MQ=88.42;MQ0=0;MQRankSum=-2.027;QD=22.52;ReadPosRankSum=0.234;VQSLOD=2.8509;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,129,1617	0/0:13,0:13:39.13:0,39,513	0/0:31,0:31:84.22:0,84,1053	0/0:23,0:23:53.91:0,54,657	0/0:36,0:36:99:0,99,1257	0/0:27,0:27:78.24:0,78,1013	0/0:19,0:19:57.17:0,57,733	0/0:24,0:24:63.20:0,63,816	1/1:3,30:33:78.19:838,78,0	0/0:23,0:23:63.19:0,63,803	0/0:25,0:25:66.13:0,66,846	0/0:24,0:24:69.22:0,69,894	0/0:24,0:24:63.19:0,63,812	0/0:31,0:31:87.26:0,87,1108	0/0:31,0:31:84.25:0,84,1076	0/0:20,0:19:57.13:0,57,725	0/0:21,0:21:63.19:0,63,812	0/0:20,0:20:57.14:0,57,729	0/0:16,0:16:48.14:0,48,605	0/0:44,0:44:99:0,123,1614	0/0:29,0:29:75.22:0,75,957	0/0:24,0:24:69.22:0,69,906	0/0:16,0:16:48.14:0,48,615	0/0:21,0:21:63.19:0,63,804	0/0:40,0:40:99:0,114,1455	0/0:31,0:31:81.25:0,81,1038	0/0:39,0:39:99:0,114,1449	0/0:11,0:11:33.11:0,33,434
chr10	8417237	.	G	GA	725.95	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=1.101;DP=786;FS=0.000;HRun=4;HaplotypeScore=87.6205;InbreedingCoeff=0.9994;MQ=83.78;MQ0=0;MQRankSum=-2.666;QD=34.57;ReadPosRankSum=-1.256;VQSLOD=3.2718;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,135,1531	0/0:10,0:10:30.09:0,30,339	0/0:25,0:25:72.11:0,72,789	0/0:21,0:21:52.02:0,52,574	0/0:30,0:30:90.26:0,90,1020	0/0:21,0:21:60.17:0,60,681	0/0:17,0:17:48.14:0,48,545	0/0:20,0:20:48.14:0,48,545	1/1:1,20:21:60.20:821,60,0	0/0:33,0:33:93.26:0,93,1055	0/0:16,0:16:48.12:0,48,535	0/0:44,0:44:99:0,126,1411	0/0:40,0:40:99:0,111,1236	0/0:49,0:49:99:0,132,1497	0/0:50,0:50:99:0,141,1589	0/0:26,0:26:78.22:0,78,884	0/0:28,0:28:84.24:0,84,953	0/0:17,0:17:45.11:0,45,499	0/0:27,0:27:81.23:0,81,919	0/0:35,0:35:99:0,102,1147	0/0:26,0:26:66.17:0,66,738	0/0:42,0:42:99:0,120,1352	0/0:23,0:23:63.18:0,63,710	0/0:21,0:21:57.10:0,57,621	0/0:19,0:19:54.14:0,54,604	0/0:26,0:26:69.19:0,69,775	0/0:37,0:37:99:0,102,1157	0/0:14,0:14:42.12:0,42,476
chr10	8418915	.	CTGTGTGTGTGTG	C	4353.91	PASS	AB=0.794;AC=17;AF=0.304;AN=56;BaseQRankSum=3.099;DP=639;FS=7.749;HRun=0;HaplotypeScore=215.1697;InbreedingCoeff=0.6727;MQ=62.15;MQ0=5;MQRankSum=-8.142;QD=19.10;ReadPosRankSum=-1.724;VQSLOD=2.6716;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:25,15:39:14.69:269,15,0	1/1:8,5:13:6.02:208,6,0	0/0:19,0:15:9.03:0,9,314	0/0:21,0:18:3.95:0,4,83	1/1:14,15:29:29.88:550,30,0	1/1:14,18:33:34.59:1010,35,0	1/1:9,12:22:15.01:403,15,0	0/0:26,0:27:12.03:0,12,254	0/0:21,0:21:44.87:0,45,1841	0/0:20,0:32:38.92:0,39,637	0/1:7,0:12:15.49:15,0,95	0/0:10,0:20:34.88:0,35,732	0/0:12,0:26:48.12:0,48,1119	0/0:11,0:21:24.05:0,24,462	0/0:22,0:39:66.16:0,66,1757	1/1:7,15:24:33.11:1052,33,0	1/1:8,4:12:6.02:208,6,0	0/1:15,0:15:46.75:58,0,47	0/0:18,0:17:12.01:0,12,250	0/0:18,0:27:36.10:0,36,809	0/0:13,0:13:27.06:0,27,665	0/0:18,0:30:42.08:0,42,573	0/0:10,0:16:17.89:0,18,291	0/0:17,0:21:18.06:0,18,307	0/1:14,11:27:8.24:581,0,8	0/0:22,0:28:52.69:0,53,1048	0/0:10,0:15:21.07:0,21,485	0/0:10,0:12:14.41:0,14,328
chr10	8420902	.	TG	T	618.36	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.172;DP=698;FS=8.003;HRun=1;HaplotypeScore=65.4229;InbreedingCoeff=0.9839;MQ=85.36;MQ0=0;MQRankSum=-2.320;QD=36.37;ReadPosRankSum=2.053;VQSLOD=3.7640;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:37:99:0,114,1822	0/0:13,0:13:39.11:0,39,597	0/0:25,0:25:74.74:0,75,1138	0/0:18,0:18:30.51:0,31,664	0/0:33,0:33:99:0,99,1578	0/0:25,0:25:75.26:0,75,1199	0/0:24,0:24:72.23:0,72,1124	0/0:41,0:41:99:0,123,1922	1/1:0,17:17:51.17:713,51,0	0/0:25,0:25:75.26:0,75,1199	0/0:35,0:35:99:0,102,1602	0/0:40,0:40:99:0,120,1890	0/0:35,0:35:99:0,105,1574	0/0:28,0:28:84.29:0,84,1339	0/0:28,0:28:84.26:0,84,1291	0/0:29,0:29:87.30:0,87,1387	0/0:17,0:17:51.17:0,51,815	0/0:14,0:14:39.09:0,39,594	0/0:24,0:24:72.25:0,72,1151	0/0:13,0:13:39.13:0,39,621	0/0:32,0:32:96.33:0,96,1534	0/0:22,0:22:63.21:0,63,1007	0/0:23,0:23:63.21:0,63,1003	0/0:23,0:23:69.24:0,69,1098	0/0:26,0:26:78.27:0,78,1245	0/0:26,0:26:78.26:0,78,1224	0/0:19,0:19:54.17:0,54,833	0/0:5,0:5:15.05:0,15,240
chr10	8422648	.	AG	A	6380.47	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=19.192;DP=631;FS=9.027;HRun=2;HaplotypeScore=162.7768;InbreedingCoeff=0.9896;MQ=67.86;MQ0=0;MQRankSum=-18.794;QD=35.25;ReadPosRankSum=3.220;VQSLOD=3.2215;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,102,1481	0/0:10,0:10:30.10:0,30,449	0/0:32,0:32:90.10:0,90,1301	0/0:22,0:21:57.19:0,57,825	0/0:23,0:23:69.22:0,69,1013	0/0:26,0:26:75.25:0,75,1122	0/0:18,0:18:54.13:0,54,764	1/1:0,22:22:66.21:849,66,0	0/0:27,0:27:81.27:0,81,1213	0/0:23,0:23:66.22:0,66,988	0/0:16,0:16:45.12:0,45,632	1/1:0,25:24:69.22:866,69,0	1/1:2,17:19:54.11:627,54,0	1/1:0,22:22:63.09:767,63,0	0/0:34,0:34:99:0,99,1457	0/0:32,0:32:90.28:0,90,1306	0/0:36,0:36:99:0,108,1555	0/0:24,0:24:66.20:0,66,967	1/1:0,7:7:21.07:269,21,0	1/1:1,28:29:87.14:1061,87,0	1/1:2,7:9:18.06:223,18,0	0/0:13,0:13:36.10:0,36,500	0/0:18,0:18:51.16:0,51,743	0/0:22,0:22:63.20:0,63,923	0/0:39,0:39:99:0,111,1606	1/1:1,18:19:9.21:611,9,0	1/1:1,19:20:60.19:761,60,0	1/1:0,9:9:27.09:345,27,0
chr10	8422653	.	TC	T	3739.01	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=19.127;DP=618;FS=12.422;HRun=1;HaplotypeScore=169.5747;InbreedingCoeff=0.9807;MQ=70.61;MQ0=0;MQRankSum=-18.988;QD=21.12;ReadPosRankSum=3.062;VQSLOD=2.3621;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,105,1630	0/0:10,0:10:30.09:0,30,457	0/0:34,0:34:96.16:0,96,1470	0/0:19,0:18:54.01:0,54,793	0/0:24,0:24:72.25:0,72,1148	0/0:27,0:27:81.28:0,81,1295	0/0:18,0:18:51.17:0,51,813	1/1:0,22:22:65.86:528,66,0	0/0:28,0:28:84.29:0,84,1337	0/0:23,0:23:69.24:0,69,1103	0/0:14,0:14:42.14:0,42,671	1/1:0,25:24:68.60:510,69,0	1/1:1,16:17:49.79:340,50,0	1/1:0,22:22:62.55:454,63,0	0/0:33,0:33:96.31:0,96,1508	0/0:29,0:29:84.29:0,84,1343	0/0:37,0:37:99:0,108,1697	0/0:21,0:21:60.20:0,60,959	1/1:0,7:7:20.95:167,21,0	1/1:0,28:28:83.31:606,83,0	1/1:1,7:8:17.81:123,18,0	0/0:12,0:12:36.12:0,36,576	0/0:18,0:18:54.15:0,54,813	0/0:22,0:22:66.23:0,66,1052	0/0:37,0:37:99:0,111,1747	1/1:1,18:19:5.51:344,6,0	1/1:0,20:20:59.70:453,60,0	1/1:0,9:9:26.93:214,27,0
chr10	8422655	.	TCC	T	4994.31	PASS	AB=0.514;AC=19;AF=0.339;AN=56;BaseQRankSum=19.133;DP=621;FS=12.350;HRun=2;HaplotypeScore=178.1570;InbreedingCoeff=0.9321;MQ=71.27;MQ0=0;MQRankSum=-18.760;QD=27.75;ReadPosRankSum=2.843;VQSLOD=3.1640;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,105,2026	0/0:9,0:9:27.09:0,27,549	0/0:34,0:34:99:0,99,1895	0/0:19,0:18:54.16:0,54,983	0/0:24,0:24:72.25:0,72,1452	0/0:27,0:27:81.28:0,81,1634	0/0:19,0:19:54.16:0,54,1026	1/1:0,22:22:66.15:683,66,0	0/0:29,0:29:87.29:0,87,1710	0/0:24,0:24:72.24:0,72,1409	0/0:14,0:14:42.14:0,42,819	1/1:1,25:25:72.12:699,72,0	1/1:0,17:17:51.04:476,51,0	1/1:0,22:22:63.09:603,63,0	0/0:32,0:32:96.32:0,96,1887	0/0:29,0:29:84.29:0,84,1696	0/0:38,0:38:99:0,111,2130	0/0:21,0:21:60.21:0,60,1199	1/1:1,7:8:24.04:241,24,0	1/1:0,28:28:84.11:807,84,0	1/1:0,7:9:18:162,18,0	0/0:12,0:12:36.12:0,36,722	0/0:17,0:17:51.16:0,51,973	0/0:22,0:22:66.20:0,66,1301	0/0:36,0:36:99:0,108,2181	0/1:1,18:19:6.93:457,0,7	1/1:1,19:20:60.11:589,60,0	1/1:0,9:9:27.06:278,27,0
chr10	8423219	.	AT	A	430.83	PASS	AB=0.917;AC=3;AF=0.054;AN=56;BaseQRankSum=6.193;DP=708;FS=0.850;HRun=8;HaplotypeScore=65.6336;InbreedingCoeff=0.6545;MQ=73.28;MQ0=0;MQRankSum=0.289;QD=11.97;ReadPosRankSum=2.294;VQSLOD=2.6663;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:30:84.12:0,84,983	0/0:11,0:12:35.98:0,36,413	0/0:12,0:12:35.85:0,36,410	0/1:10,1:11:13.41:13,0,131	0/0:28,0:28:78.24:0,78,942	0/0:29,0:29:87.27:0,87,1051	0/0:26,0:26:63.19:0,63,761	0/0:49,0:49:99:0,120,1416	1/1:4,21:25:54.08:522,54,0	0/0:37,0:37:99:0,102,1232	0/0:21,0:21:60.18:0,60,712	0/0:24,0:24:69.21:0,69,833	0/0:27,0:27:81.24:0,81,967	0/0:29,0:29:78.24:0,78,942	0/0:31,0:31:93.29:0,93,1123	0/0:30,0:30:78.22:0,78,920	0/0:17,0:16:45.14:0,45,543	0/0:15,0:15:39.12:0,39,471	0/0:28,0:28:66.20:0,66,788	0/0:33,0:33:87.27:0,87,1051	0/0:18,0:18:48.15:0,48,580	0/0:29,0:29:81.25:0,81,978	0/0:25,0:25:72.21:0,72,859	0/0:19,0:19:48.15:0,48,579	0/0:27,0:27:69.17:0,69,806	0/0:30,0:30:84.26:0,84,1014	0/0:36,0:35:93.29:0,93,1123	0/0:10,0:10:18.06:0,18,217
chr10	8425565	.	CA	C	20561.22	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=0.750;DP=599;FS=0.000;HRun=2;HaplotypeScore=62.3429;InbreedingCoeff=0.9892;MQ=79.09;MQ0=0;MQRankSum=-9.075;QD=36.26;ReadPosRankSum=5.628;VQSLOD=4.9338;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,26:27:72.23:934,72,0	1/1:0,10:10:27.09:351,27,0	0/0:17,0:16:48.16:0,48,695	0/0:15,0:14:37.51:0,38,520	1/1:0,33:33:96.31:1246,96,0	1/1:0,24:24:66.21:856,66,0	1/1:0,10:10:21.07:273,21,0	1/1:0,41:41:99:1597,123,0	1/1:1,17:18:51.17:662,51,0	1/1:1,18:19:55.41:690,55,0	1/1:0,20:20:57.19:740,57,0	1/1:0,21:21:63.20:818,63,0	1/1:2,20:22:57.18:740,57,0	1/1:0,25:25:72.23:935,72,0	1/1:0,24:24:69.22:895,69,0	1/1:0,24:24:66.21:856,66,0	1/1:0,17:17:42.14:545,42,0	1/1:0,17:17:48.16:623,48,0	1/1:0,15:15:45.15:585,45,0	1/1:0,33:33:93.30:1207,93,0	1/1:2,19:21:51.17:662,51,0	1/1:0,15:15:45.15:584,45,0	1/1:1,16:17:51.16:653,51,0	1/1:0,6:6:15.05:195,15,0	1/1:1,20:21:51.17:662,51,0	1/1:0,28:28:84.26:1076,84,0	1/1:0,36:36:99:1324,102,0	1/1:2,21:23:69.04:851,69,0
chr10	8425661	.	ATCTG	A	3646.89	PASS	AB=1.000;AC=35;AF=0.625;AN=56;BaseQRankSum=12.631;DP=614;FS=14.376;HRun=0;HaplotypeScore=181.2406;InbreedingCoeff=0.3023;MQ=52.57;MQ0=7;MQRankSum=-2.177;QD=7.32;ReadPosRankSum=-0.798;VQSLOD=1.5318;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:31:34.86:262,35,0	1/1:7,0:7:11.68:93,12,0	0/1:14,0:6:0:0,0,0	0/0:8,0:4:3.47:0,3,29	1/1:23,0:23:38.83:307,39,0	1/1:23,0:23:37.24:248,37,0	1/1:22,0:20:30.23:228,30,0	0/0:30,0:29:62.72:0,63,515	1/1:2,14:16:2.96:19,3,0	0/1:25,0:24:58.49:265,0,58	1/1:24,0:22:14.07:119,14,0	0/1:22,0:22:81.01:81,0,198	0/1:22,0:22:31.11:31,0,280	0/1:23,0:23:68.10:68,0,146	0/1:25,0:22:25.51:156,0,26	1/1:33,0:32:62.11:441,62,0	1/1:30,0:30:21:241,21,0	0/1:21,0:21:10.32:218,0,10	0/0:13,0:12:12.86:0,13,226	0/1:29,0:29:67.01:67,0,284	0/1:16,0:16:50.01:50,0,161	1/1:22,0:21:18.13:163,18,0	1/1:29,0:27:26.46:208,26,0	1/1:12,0:12:8.99:75,9,0	1/1:25,0:28:33.75:307,34,0	0/0:31,0:30:59.18:0,59,1001	0/0:21,0:21:27:0,27,599	0/0:13,0:13:39.06:0,39,688
chr10	8425673	.	GTCTA	G	1225.35	PASS	AB=0.977;AC=14;AF=0.269;AN=52;BaseQRankSum=-2.123;DP=595;FS=9.192;HRun=0;HaplotypeScore=193.8891;InbreedingCoeff=0.6424;MQ=51.86;MQ0=6;MQRankSum=2.828;QD=6.96;ReadPosRankSum=2.444;VQSLOD=2.0902;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:13.16:0,13,98	0/0:7,0:7:2.48:0,2,24	./.	./.	0/0:24,0:24:5.97:0,6,49	0/0:25,0:24:15.19:0,15,95	0/0:20,0:17:2.60:0,3,6	0/0:30,0:29:1.25:0,1,3	0/0:18,0:18:12.40:0,12,93	0/0:20,0:19:18.66:0,19,225	0/0:23,0:21:3.37:0,3,26	1/1:9,16:25:18.06:276,18,0	1/1:20,1:21:23.84:267,24,0	1/1:10,11:21:15.05:230,15,0	0/0:23,0:20:15.94:0,16,176	0/0:32,0:31:14.58:0,15,145	0/0:30,0:30:12.91:0,13,97	0/0:22,0:22:19.30:0,19,193	1/1:16,1:17:14.99:146,15,0	1/1:16,14:30:17.92:276,18,0	1/1:9,7:16:12.04:184,12,0	0/0:18,0:17:7.78:0,8,50	0/0:27,0:25:11.79:0,12,100	0/0:13,0:13:3:0,3,25	0/1:25,0:25:4.74:7,0,5	0/0:32,0:31:36.48:0,36,652	0/1:20,1:21:12.89:13,0,461	0/0:13,0:13:27.05:0,27,487
chr10	8425775	.	TA	T	386.67	PASS	AB=0.875;AC=3;AF=0.054;AN=56;BaseQRankSum=3.538;DP=622;FS=16.394;HRun=11;HaplotypeScore=79.4190;InbreedingCoeff=0.4891;MQ=70.99;MQ0=1;MQRankSum=-0.591;QD=10.45;ReadPosRankSum=-0.062;VQSLOD=1.1198;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,1:30:48.73:0,49,695	0/0:6,0:6:18.05:0,18,192	0/0:23,2:23:2.03:0,2,271	0/1:12,2:12:48.94:49,0,57	0/0:30,2:32:48.40:0,48,699	0/0:16,1:18:26.31:0,26,463	0/0:18,2:20:4.83:0,5,454	0/0:29,1:29:66.16:0,66,697	1/1:3,20:23:53.93:443,54,0	0/0:28,1:30:26.32:0,26,469	0/0:19,1:20:26.40:0,26,463	0/0:21,0:21:51.10:0,51,528	0/0:22,3:26:19.69:0,20,587	0/0:16,0:16:42.09:0,42,440	0/0:17,3:20:27.01:0,27,343	0/0:20,3:23:29.43:0,29,497	0/0:30,1:31:65.56:0,66,894	0/0:15,0:15:27.03:0,27,411	0/0:20,1:21:23.46:0,23,443	0/0:21,2:25:19.54:0,20,575	0/0:11,2:13:8.40:0,8,283	0/0:29,1:30:56.47:0,56,779	0/0:22,0:22:32.51:0,33,524	0/0:20,0:20:48.12:0,48,511	0/0:19,0:19:42.02:0,42,432	0/0:30,0:30:78.16:0,78,812	0/0:33,0:33:86.86:0,87,888	0/0:8,0:8:24.04:0,24,243
chr10	8427735	.	T	TACACAC	1913.99	PASS	AB=1.000;AC=20;AF=0.400;AN=50;BaseQRankSum=-0.676;DP=408;FS=13.047;HRun=0;HaplotypeScore=118.5433;InbreedingCoeff=0.5271;MQ=54.05;MQ0=18;MQRankSum=-3.969;QD=10.46;ReadPosRankSum=-4.648;VQSLOD=0.0406;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:9.03:0,9,136	0/0:2,0:2:3.01:0,3,48	./.	./.	0/0:12,0:13:9.02:0,9,117	0/0:15,0:15:1.46:0,1,233	0/1:15,0:15:31.92:32,0,137	1/1:34,0:33:22.69:543,23,0	0/1:8,0:8:0:0,0,0	0/0:11,0:10:8.83:0,9,122	0/0:12,0:15:14.85:0,15,201	1/1:12,1:13:6.02:122,6,0	1/1:12,2:12:5.93:106,6,0	./.	0/0:12,0:12:12.14:0,12,175	0/0:6,0:6:4.55:0,5,29	0/0:12,0:12:15.26:0,15,294	0/1:7,0:7:57.62:58,0,86	1/1:8,0:7:3.01:41,3,0	1/1:21,1:21:12:263,12,0	0/0:19,0:19:0.47:0,0,1	0/1:6,0:9:0:0,0,0	0/0:8,0:8:6.02:0,6,81	0/0:19,0:20:12.96:0,13,191	0/0:10,0:12:15.04:0,15,219	1/1:23,1:23:33.91:551,34,0	1/1:19,1:20:5.94:132,6,0	1/1:8,1:9:13.75:228,14,0
chr10	8427771	.	C	CACACATAT	2076.58	PASS	AB=0.981;AC=22;AF=0.407;AN=54;BaseQRankSum=-4.676;DP=350;FS=2.984;HRun=0;HaplotypeScore=131.9789;InbreedingCoeff=-0.4300;MQ=49.43;MQ0=5;MQRankSum=-0.707;QD=7.24;ReadPosRankSum=1.274;VQSLOD=2.0487;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:6.01:0,6,61	0/1:6,0:6:7.76:231,0,8	./.	0/1:3,0:1:0:0,0,0	0/1:14,0:14:38.75:39,0,44	0/1:12,0:12:99:141,0,120	0/1:7,0:7:32.42:32,0,72	0/1:41,0:41:99:219,0,706	0/1:4,4:10:0:0,0,0	0/1:13,0:13:24.04:348,0,24	0/1:10,0:10:57.11:57,0,62	0/1:17,0:17:48.12:83,0,48	0/1:15,0:13:27.02:27,0,60	0/0:13,0:13:6.02:0,6,79	0/1:9,0:9:34.74:35,0,53	0/0:5,0:5:2.80:0,3,8	0/1:16,0:16:98.62:99,0,134	0/1:13,0:13:22.78:188,0,23	0/1:5,0:5:8.62:9,0,26	1/1:22,0:20:12.04:221,12,0	0/0:8,0:7:0.03:0,0,0	0/1:4,0:4:0:0,0,0	0/0:8,0:8:6.01:0,6,56	0/0:7,0:7:13.06:0,13,91	0/1:14,0:14:99:151,0,100	0/1:23,0:22:99:237,0,368	0/1:21,0:20:57.13:57,0,213	0/1:12,0:11:41.97:42,0,104
chr10	8427783	.	CAT	C	2958.91	PASS	AB=0.773;AC=30;AF=0.556;AN=54;BaseQRankSum=-2.406;DP=307;FS=1.568;HRun=0;HaplotypeScore=83.4686;InbreedingCoeff=0.6859;MQ=55.34;MQ0=3;MQRankSum=1.022;QD=14.43;ReadPosRankSum=0.408;VQSLOD=3.4849;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:2.74:0,3,12	0/0:5,0:5:15.05:0,15,246	0/0:4,0:1:2.84:0,3,14	0/0:3,0:3:3.01:0,3,32	0/0:13,0:13:4.56:0,5,37	0/0:10,0:10:19.62:0,20,292	0/0:2,0:2:3.01:0,3,46	1/1:8,28:36:81.25:993,81,0	0/0:6,0:6:11.77:0,12,142	1/1:12,0:12:28.96:250,29,0	1/1:9,0:9:5.45:43,5,0	1/1:6,12:18:5.98:74,6,0	1/1:2,11:12:8.51:101,9,0	1/1:1,13:14:5.91:74,6,0	1/1:8,0:8:9.34:86,9,0	0/1:4,0:4:0:0,0,0	0/0:14,0:14:18.03:0,18,264	1/1:13,1:14:17.43:222,17,0	1/1:2,4:6:12.04:146,12,0	0/0:7,11:17:0.23:0,0,0	./.	1/1:3,0:3:6.02:74,6,0	0/1:1,5:6:0.02:0,0,0	1/1:4,0:4:6.02:74,6,0	0/0:13,0:13:21.06:0,21,317	1/1:8,19:26:54.12:636,54,0	1/1:4,15:19:17.92:222,18,0	1/1:2,10:11:12.03:141,12,0
chr10	8427785	.	T	TAC	1115.18	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=-2.371;DP=309;FS=2.878;HRun=0;HaplotypeScore=92.9914;InbreedingCoeff=0.2131;MQ=55.40;MQ0=3;MQRankSum=1.468;QD=6.76;ReadPosRankSum=-2.625;VQSLOD=2.6734;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,0:12:4.06:11,4,0	0/0:5,0:5:14.97:0,15,122	0/0:4,0:1:2.84:0,3,14	0/0:3,0:3:2.75:0,3,30	0/0:6,9:15:4.94:0,5,16	0/0:10,0:10:3.62:0,4,171	0/0:2,0:2:3.01:0,3,46	0/1:35,0:35:48.41:48,0,176	0/0:7,0:7:2.85:0,3,146	1/1:14,0:14:34.91:431,35,0	1/1:9,0:9:4.08:79,4,0	0/0:17,0:17:8.24:0,8,41	0/1:13,0:12:14.39:19,0,14	0/0:14,0:14:4.66:0,5,18	1/1:8,0:8:3.10:115,3,0	1/1:1,3:4:3.01:57,3,0	0/0:13,0:13:10.63:0,11,135	0/1:14,0:14:9.02:285,0,9	0/1:6,0:6:24.60:32,0,25	0/0:17,0:16:0.35:0,0,1	0/1:3,0:2:0:0,0,0	1/1:3,0:3:5.75:49,6,0	0/0:6,0:6:0:0,0,0	1/1:3,0:3:8.47:41,8,0	0/0:12,0:12:25.80:0,26,256	0/1:26,0:25:87.22:87,0,115	0/0:19,0:18:18.39:0,18,85	0/1:15,0:14:16.22:16,0,20
chr10	8429291	.	T	TA	6786.51	PASS	AB=0.668;AC=49;AF=0.875;AN=56;BaseQRankSum=-5.562;DP=628;FS=4.121;HRun=12;HaplotypeScore=84.3893;InbreedingCoeff=0.1685;MQ=76.50;MQ0=0;MQRankSum=-1.731;QD=11.16;ReadPosRankSum=2.249;VQSLOD=4.8061;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,23:32:15.77:278,16,0	0/1:1,7:8:0.88:154,0,1	0/1:24,0:24:21.58:22,0,157	0/0:18,0:19:16.61:0,17,121	1/1:5,22:27:19.08:403,19,0	1/1:8,21:29:14.25:299,14,0	1/1:5,14:19:45.47:441,45,0	1/1:10,30:41:77.04:729,77,0	1/1:7,1:19:25.73:143,26,0	1/1:12,1:29:46.47:259,46,0	1/1:7,2:28:43.73:255,44,0	1/1:4,10:14:8.14:111,8,0	1/1:6,17:23:27.04:263,27,0	1/1:6,20:26:14.15:298,14,0	1/1:5,2:29:42.89:233,43,0	0/1:8,15:24:48.54:209,0,49	1/1:4,13:17:27.04:263,27,0	1/1:4,13:17:11.10:261,11,0	0/1:3,9:12:13.58:192,0,14	1/1:10,25:37:46.97:543,47,0	0/1:8,11:19:9.89:76,0,10	1/1:6,1:21:25.70:129,26,0	1/1:6,0:25:22.88:125,23,0	1/1:2,1:12:5.68:29,6,0	1/1:4,17:21:37.30:353,37,0	1/1:8,19:27:28.07:378,28,0	1/1:4,17:23:16.83:298,17,0	1/1:3,0:3:5.85:43,6,0
chr10	8429850	.	TATC	T	144.74	PASS	AB=0.889;AC=3;AF=0.056;AN=54;BaseQRankSum=4.644;DP=531;FS=1.025;HRun=0;HaplotypeScore=149.0076;InbreedingCoeff=0.0590;MQ=57.37;MQ0=30;MQRankSum=-4.146;QD=2.37;ReadPosRankSum=-2.116;VQSLOD=2.0246;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:13:9.03:0,9,150	0/0:7,0:7:15.05:0,15,249	0/0:12,0:7:15.04:0,15,210	0/1:24,0:14:22.81:63,0,23	0/0:14,0:10:8.98:0,9,211	0/0:16,0:14:27.09:0,27,577	0/0:16,0:12:24.08:0,24,471	0/0:31,0:27:71.89:0,72,879	0/0:20,0:17:22.18:0,22,694	0/0:29,0:25:73.71:0,74,1309	0/0:12,0:10:12.04:0,12,239	0/0:25,0:21:47.59:0,48,636	0/0:42,0:35:77.27:0,77,1068	0/0:29,0:29:52.29:0,52,726	0/1:23,0:17:5.71:6,0,193	0/0:14,0:13:18.06:0,18,360	0/0:3,0:2:0:0,0,0	0/0:4,0:3:3.01:0,3,74	0/1:7,7:12:99:169,0,151	0/0:25,0:24:57.18:0,57,805	0/0:25,0:23:56.17:0,56,782	0/0:7,0:5:6.02:0,6,137	0/0:24,0:18:13.13:0,13,481	./.	0/0:14,0:13:33.11:0,33,699	0/0:35,0:27:78.14:0,78,1157	0/0:33,0:29:45.26:0,45,902	0/0:14,0:13:38.32:0,38,605
chr10	8429853	.	C	CTATT	3541.94	PASS	AB=0.932;AC=18;AF=0.333;AN=54;BaseQRankSum=-2.312;DP=519;FS=6.352;HRun=0;HaplotypeScore=140.2537;InbreedingCoeff=-0.0500;MQ=58.29;MQ0=30;MQRankSum=-4.569;QD=11.89;ReadPosRankSum=-3.094;VQSLOD=2.4596;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:11:0.94:0,1,2	0/1:2,0:7:44.13:111,0,44	0/0:15,0:10:11.08:0,11,138	0/0:23,0:14:6.19:0,6,42	0/1:14,0:10:12.02:12,0,39	0/1:16,0:14:29.93:30,0,104	0/0:13,0:11:9.42:0,9,93	0/1:33,0:28:99:104,0,235	0/1:20,0:17:7.42:7,0,55	0/1:28,0:24:89.83:90,0,167	1/1:13,0:11:0.88:2,1,0	0/1:24,0:20:4.70:5,0,180	0/0:41,0:34:41.33:0,41,445	0/0:27,0:27:12.22:0,12,273	0/1:25,0:17:14.31:14,0,19	0/0:12,0:11:9.02:0,9,125	0/1:3,0:2:0:0,0,0	0/0:3,0:2:3:0,3,25	0/0:13,0:12:7.96:0,8,95	0/0:24,0:23:41.64:0,42,300	0/0:24,0:22:40.45:0,40,300	0/0:7,0:5:1.26:0,1,22	0/1:23,0:17:25.99:26,0,77	./.	0/1:10,0:11:74.67:75,0,97	0/1:23,12:27:36.24:1151,0,36	1/1:20,11:27:44.99:1251,45,0	1/1:7,7:13:38.69:665,39,0
chr10	8429861	.	C	CT	2140.40	PASS	AB=0.777;AC=18;AF=0.360;AN=50;BaseQRankSum=-2.215;DP=477;FS=5.082;HRun=1;HaplotypeScore=123.4622;InbreedingCoeff=-0.1140;MQ=62.37;MQ0=30;MQRankSum=0.426;QD=9.77;ReadPosRankSum=-5.409;VQSLOD=-0.7006;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,5:9:6.02:95,6,0	0/1:5,0:5:31.48:52,0,31	0/0:16,0:11:19.22:0,19,203	0/0:27,0:15:20.58:0,21,207	0/1:6,5:7:35.81:42,0,36	0/1:5,11:14:56.83:307,0,57	0/1:6,6:9:30.31:132,0,30	0/0:34,0:29:78.23:0,78,1052	0/1:6,10:12:14.75:331,0,15	0/1:10,14:20:99:532,0,156	1/1:8,6:12:12.04:189,12,0	0/0:20,0:16:26.94:0,27,356	0/0:38,0:31:66.49:0,66,902	0/0:26,0:26:42.61:0,43,589	0/1:18,6:14:35.81:42,0,36	0/1:8,3:10:15.87:16,0,75	./.	./.	0/0:13,0:12:35.84:0,36,360	0/0:20,0:19:33.11:0,33,462	0/0:24,0:22:42.12:0,42,568	1/1:7,2:6:3.01:48,3,0	0/1:12,6:11:26.75:153,0,27	./.	0/1:8,1:9:59.85:218,0,60	0/0:31,0:23:7.32:0,7,429	0/1:26,1:23:21.71:22,0,182	0/1:12,0:11:36.51:121,0,37
chr10	8429870	.	AGCTAGCTC	A	342.71	PASS	AB=0.914;AC=11;AF=0.212;AN=52;BaseQRankSum=4.900;DP=404;FS=11.543;HRun=0;HaplotypeScore=136.9165;InbreedingCoeff=0.1901;MQ=65.45;MQ0=31;MQRankSum=-2.215;QD=4.51;ReadPosRankSum=-5.929;VQSLOD=-0.6475;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:6,1:6:5.85:34,6,0	0/0:5,0:5:8.48:0,8,89	0/0:21,0:14:20.43:0,20,565	0/0:30,0:16:9.51:0,10,313	0/0:7,1:5:5.89:0,6,174	0/1:6,2:6:43.83:44,0,196	0/0:6,0:3:1.80:0,2,103	0/0:35,0:27:74.30:0,74,2080	0/1:7,3:7:79.74:80,0,112	0/1:20,0:16:99:150,0,557	1/1:10,0:8:5.98:49,6,0	0/0:19,0:15:20.91:0,21,644	0/0:35,0:28:56.32:0,56,1503	0/0:24,0:24:38.21:0,38,1111	0/0:19,0:8:0.52:0,1,126	0/0:7,0:6:6.02:0,6,210	0/0:2,0:1:0:0,0,0	./.	0/0:13,0:12:36.08:0,36,982	0/0:18,0:17:30.08:0,30,813	0/0:20,0:18:30.06:0,30,786	1/1:8,0:5:3:27,3,0	0/0:11,0:5:1.80:0,2,126	./.	0/1:7,0:6:12.92:13,0,201	0/0:25,0:17:48.15:0,48,1448	0/0:22,0:18:36.09:0,36,865	0/1:6,0:5:84.03:84,0,307
chr10	8429874	.	AGCTC	A	138.26	PASS	AB=0.943;AC=10;AF=0.192;AN=52;BaseQRankSum=5.114;DP=377;FS=2.556;HRun=0;HaplotypeScore=110.7133;InbreedingCoeff=0.2370;MQ=66.60;MQ0=30;MQRankSum=-1.996;QD=1.87;ReadPosRankSum=-4.370;VQSLOD=0.7590;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:5,0:4:1.77:4,2,0	0/0:5,0:5:9.03:0,9,121	0/1:23,1:14:8.05:8,0,369	0/0:29,0:16:22.19:0,22,251	0/0:8,0:5:6.01:0,6,82	0/0:7,0:5:3.58:0,4,99	0/0:5,0:2:3.01:0,3,51	0/0:34,0:25:68.52:0,69,1102	0/1:9,0:6:3.44:3,0,78	0/1:10,3:10:99:129,0,344	1/1:8,1:7:5.96:43,6,0	0/0:18,0:14:20.99:0,21,329	0/0:33,0:26:47.91:0,48,762	0/0:23,0:23:35.19:0,35,577	0/0:18,0:7:3.90:0,4,88	0/0:7,0:6:6.02:0,6,102	0/0:2,0:1:0:0,0,0	./.	0/0:13,0:12:35.99:0,36,440	0/0:16,0:15:27.05:0,27,383	0/0:17,0:15:24.06:0,24,371	1/1:8,0:5:3:25,3,0	0/0:11,0:5:2.99:0,3,86	./.	0/0:6,0:5:6.02:0,6,102	0/0:24,0:16:45.10:0,45,780	0/0:20,0:16:30.07:0,30,441	0/1:6,0:5:47.27:47,0,146
chr10	8429926	.	T	TCTAC	91.55	PASS	AB=0.915;AC=9;AF=0.161;AN=56;BaseQRankSum=-1.033;DP=246;FS=0.000;HRun=0;HaplotypeScore=64.1202;InbreedingCoeff=0.0878;MQ=27.09;MQ0=28;MQRankSum=-0.839;QD=1.02;ReadPosRankSum=-0.717;VQSLOD=1.1800;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:9:2.96:0,3,54	0/0:1,0:1:3.01:0,3,34	0/0:7,0:2:2.94:0,3,18	0/0:5,0:2:1.25:0,1,3	0/0:11,0:6:6.02:0,6,96	0/0:4,0:3:0:0,0,0	0/0:3,0:1:0:0,0,0	0/0:14,0:4:8.96:0,9,68	0/0:17,0:14:6.01:0,6,72	0/1:18,3:12:99:138,0,128	0/0:4,2:6:3:0,3,25	0/1:8,0:4:0:0,0,0	1/1:11,0:7:2.80:16,3,0	0/1:10,0:9:11.34:11,0,19	0/0:22,2:15:24.98:0,25,133	0/0:11,0:9:0:0,0,0	0/0:3,0:2:3.01:0,3,53	0/0:3,0:1:2.96:0,3,19	0/0:3,0:2:3.01:0,3,54	0/0:3,0:3:2.99:0,3,24	0/1:11,0:10:0.04:0,0,0	0/1:8,2:8:17.01:17,0,35	0/1:10,1:8:12.15:12,0,43	0/1:5,2:6:0:0,0,0	0/0:2,0:1:2.94:0,3,18	0/0:13,0:8:17.94:0,18,173	0/0:8,0:5:4.24:0,4,28	0/0:7,0:5:4.55:0,5,29
chr10	8429945	.	T	TCTAG	4692.48	PASS	AB=0.820;AC=35;AF=0.700;AN=50;BaseQRankSum=-4.874;DP=303;FS=7.453;HRun=0;HaplotypeScore=86.5756;InbreedingCoeff=0.1768;MQ=39.42;MQ0=22;MQRankSum=0.378;QD=19.88;ReadPosRankSum=-2.590;VQSLOD=3.0917;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:8,3:9:2.89:0,3,18	1/1:2,0:2:2.98:21,3,0	0/0:15,0:2:6.02:0,6,100	0/0:14,0:6:7.55:0,8,77	1/1:6,2:6:5.97:73,6,0	1/1:3,5:6:3.01:56,3,0	0/0:4,0:1:0:0,0,0	1/1:8,0:1:2.97:20,3,0	0/1:17,0:15:46.50:90,0,46	0/1:17,6:15:99:372,0,109	0/0:9,0:8:3.89:0,4,33	./.	1/1:13,5:16:21.06:465,21,0	1/1:6,7:11:24.08:609,24,0	1/1:20,4:17:17.37:412,17,0	0/1:4,6:7:27.16:158,0,27	./.	./.	0/1:4,1:5:38.94:104,0,39	1/1:9,2:11:6.02:153,6,0	1/1:8,4:10:2.98:56,3,0	0/1:9,2:10:20.34:163,0,20	1/1:8,1:7:12.02:223,12,0	1/1:5,5:8:5.90:152,6,0	1/1:3,1:4:2.88:25,3,0	1/1:14,7:19:10.19:736,10,0	1/1:9,2:11:26.97:549,27,0	1/1:10,1:11:12.04:258,12,0
chr10	8429956	.	A	AGCTC	2727.37	PASS	AB=0.952;AC=20;AF=0.385;AN=52;BaseQRankSum=-0.862;DP=439;FS=28.151;HRun=0;HaplotypeScore=118.6191;InbreedingCoeff=-0.3656;MQ=38.86;MQ0=49;MQRankSum=-0.250;QD=8.44;ReadPosRankSum=7.403;VQSLOD=0.2036;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:8:5.44:0,5,48	0/0:6,0:6:13.50:0,14,98	0/0:20,0:3:9.01:0,9,148	0/0:18,0:6:10.49:0,10,106	0/1:10,0:8:15.01:15,0,40	0/1:19,0:12:25.94:26,0,49	./.	0/0:16,0:8:2.91:0,3,137	0/1:12,10:18:73.21:87,0,73	0/1:25,1:16:99:302,0,162	0/0:12,0:9:13.69:0,14,100	0/0:16,0:13:8.72:0,9,62	0/1:24,0:22:40.94:280,0,41	0/1:19,0:16:19.90:401,0,20	0/1:25,9:24:67.76:357,0,68	0/1:16,0:11:77.84:78,0,105	0/1:5,0:3:0:0,0,0	./.	0/1:8,0:6:39.88:40,0,106	0/1:21,0:18:73.57:74,0,170	1/1:15,0:12:2.65:39,3,0	0/1:13,0:12:88.45:88,0,128	0/1:9,3:10:12.30:202,0,12	1/1:11,2:10:5.87:109,6,0	0/0:7,0:5:4.35:0,4,28	0/1:26,0:21:99:330,0,205	0/1:23,0:22:71.40:306,0,71	0/1:16,0:15:97.90:140,0,98
chr10	8429959	.	TACCTATC	T	376.35	PASS	AB=0.976;AC=15;AF=0.288;AN=52;BaseQRankSum=5.389;DP=451;FS=6.727;HRun=0;HaplotypeScore=134.9947;InbreedingCoeff=-0.1768;MQ=39.10;MQ0=50;MQRankSum=-5.804;QD=1.60;ReadPosRankSum=-3.520;VQSLOD=0.2335;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:6:2.23:0,2,17	0/0:6,0:6:0.18:0,0,221	0/0:19,0:3:9.02:0,9,189	0/0:17,0:6:9.91:0,10,159	0/1:13,0:11:6.12:6,0,477	0/1:19,0:12:8.94:9,0,92	./.	0/0:17,0:8:21.07:0,21,603	0/1:22,1:17:8.07:104,0,8	0/0:24,0:15:33.30:0,33,1137	0/1:12,0:9:17.05:17,0,407	0/0:16,0:13:8.97:0,9,184	0/0:25,1:23:49.35:0,49,1256	0/0:19,0:16:36.06:0,36,1125	0/1:33,0:23:33.09:33,0,839	0/1:15,1:11:80.44:80,0,208	1/1:5,0:3:2.78:13,3,0	./.	0/0:8,0:6:3.45:0,3,492	0/0:24,0:21:32.81:0,33,823	1/1:13,1:11:2.84:19,3,0	0/0:13,0:12:27.05:0,27,881	0/1:13,0:11:25.70:26,0,412	0/1:14,0:11:19.54:20,0,222	0/0:7,0:5:4.57:0,5,116	0/1:27,1:23:54.03:54,0,1990	0/1:25,1:23:37.04:37,0,1069	0/1:17,2:18:99:101,0,991
chr10	8429966	.	CATCT	C	900.22	PASS	AB=0.909;AC=19;AF=0.380;AN=50;BaseQRankSum=2.902;DP=491;FS=1.407;HRun=0;HaplotypeScore=126.6972;InbreedingCoeff=0.0372;MQ=39.00;MQ0=56;MQRankSum=-0.259;QD=3.31;ReadPosRankSum=-0.948;VQSLOD=1.9027;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:7,0:6:0.03:0,0,0	0/1:9,0:9:51.33:136,0,51	0/0:17,0:2:3.01:0,3,49	./.	0/0:10,0:9:18.06:0,18,425	0/1:10,0:12:3:60,0,3	./.	0/0:21,0:8:23.90:0,24,324	1/1:12,0:16:2.80:13,3,0	0/0:24,0:18:40.65:0,41,817	0/0:9,0:11:13.29:0,13,291	0/1:12,2:15:58.98:59,0,63	0/1:25,4:26:81.94:82,0,778	0/0:19,0:17:35.98:0,36,761	0/0:24,0:20:25.64:0,26,581	0/1:12,0:11:3.12:94,0,3	1/1:2,0:2:3:27,3,0	./.	0/1:10,0:8:6.87:7,0,391	0/1:12,10:23:99:250,0,465	1/1:7,3:10:0.07:1,0,0	0/0:16,0:14:24.04:0,24,526	0/0:15,0:14:21.02:0,21,427	0/0:13,0:11:8.88:0,9,163	1/1:3,0:5:9.28:77,9,0	0/1:30,2:29:37.15:37,0,1511	0/1:25,4:28:99:110,0,888	0/1:16,2:18:93.84:94,0,789
chr10	8429997	.	CTATT	C	888.85	PASS	AB=0.927;AC=12;AF=0.222;AN=54;BaseQRankSum=0.700;DP=774;FS=6.457;HRun=0;HaplotypeScore=171.6585;InbreedingCoeff=-0.2607;MQ=33.63;MQ0=142;MQRankSum=1.465;QD=2.45;ReadPosRankSum=3.566;VQSLOD=2.1691;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:15:6.94:0,7,42	0/1:11,5:14:99:225,0,146	0/0:7,0:1:3:0,3,25	./.	0/0:25,0:17:26.98:0,27,342	0/1:24,6:15:88.10:88,0,117	0/0:19,7:9:1.55:0,2,4	0/0:45,0:11:23.93:0,24,248	0/0:28,0:21:26.80:0,27,186	0/0:44,0:26:45.95:0,46,1232	0/0:30,0:18:26.76:0,27,441	0/1:27,0:22:61.26:61,0,136	0/0:41,1:31:21.45:0,21,878	0/1:35,0:26:38.41:38,0,806	0/0:36,0:20:33.95:0,34,725	0/1:22,7:21:99:166,0,185	0/0:9,0:6:3.61:0,4,58	0/0:12,0:2:2.98:0,3,21	0/1:24,0:10:10.87:11,0,441	0/1:47,0:34:91.68:92,0,582	0/1:19,1:11:1.85:2,0,3	0/0:31,0:18:36.93:0,37,696	0/0:29,0:20:45.89:0,46,716	0/0:18,0:13:13.78:0,14,233	0/1:14,2:12:99:113,0,103	0/1:54,1:36:45.79:46,0,1867	0/1:38,1:35:52.66:53,0,1060	0/1:23,2:24:99:135,0,963
chr10	8430036	.	CATCT	C	5270.67	PASS	AB=0.831;AC=27;AF=0.540;AN=50;BaseQRankSum=3.848;DP=1062;FS=26.563;HRun=0;HaplotypeScore=293.1013;InbreedingCoeff=-0.6900;MQ=36.15;MQ0=153;MQRankSum=-1.403;QD=5.43;ReadPosRankSum=-1.119;VQSLOD=2.3374;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:37,8:37:99:128,0,212	0/1:21,5:24:99:210,0,165	./.	./.	0/1:20,5:44:99:212,0,103	0/1:35,6:28:99:101,0,286	0/0:32,0:16:18.06:0,18,360	./.	0/1:37,7:34:99:193,0,789	0/1:37,5:34:78.14:78,0,832	0/1:30,6:27:99:252,0,189	1/1:23,5:26:15.85:191,16,0	0/1:38,7:39:34.61:160,0,35	0/1:25,9:25:22.81:304,0,23	0/1:43,4:31:99:299,0,183	0/1:42,5:41:99:205,0,885	0/1:19,1:16:15.05:15,0,652	0/1:14,7:11:99:255,0,186	0/1:20,4:17:8.92:161,0,9	1/1:54,10:58:19.58:371,20,0	1/1:16,6:9:7.02:31,7,0	0/1:37,4:30:99:143,0,602	0/1:35,5:29:99:167,0,510	0/1:20,6:22:96.44:189,0,96	0/1:25,7:26:62.63:63,0,591	0/1:41,10:41:91.21:578,0,91	0/1:45,7:49:19.20:549,0,19	0/1:22,9:30:11.74:415,0,12
chr10	8430055	.	CTATCTATCTATCTATCTATCTATT	C	1115.82	PASS	AB=0.942;AC=5;AF=0.100;AN=50;BaseQRankSum=-1.600;DP=1028;FS=10.919;HRun=0;HaplotypeScore=509.2606;InbreedingCoeff=-0.1182;MQ=36.17;MQ0=145;MQRankSum=-3.696;QD=4.54;ReadPosRankSum=-1.678;VQSLOD=0.0190;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:41:46.07:0,46,1349	0/0:28,0:23:31.77:0,32,1394	./.	./.	0/0:59,0:46:45:0,45,1608	0/0:39,0:24:54.36:0,54,1707	0/0:30,0:16:32.57:0,33,1206	./.	0/0:42,0:34:81.16:0,81,3505	0/0:48,0:36:99:0,99,4283	0/0:40,0:26:48.39:0,48,2254	0/0:24,0:19:16.87:0,17,476	0/1:36,1:24:99:217,0,850	0/0:38,0:25:38.78:0,39,1392	0/0:40,0:24:41.67:0,42,1801	0/0:48,0:39:95.02:0,95,4504	0/0:24,0:19:42.15:0,42,2147	0/0:25,0:17:48.10:0,48,1632	0/0:24,0:16:33.11:0,33,1025	0/1:40,22:50:26.07:26,0,1348	0/0:21,0:10:4.46:0,4,243	0/0:47,0:29:57.62:0,58,2538	0/0:47,0:31:56.37:0,56,2611	0/0:28,0:23:26.65:0,27,1240	0/0:39,0:26:50.84:0,51,2453	0/1:60,0:37:99:632,0,2247	0/1:50,0:41:99:177,0,2333	0/1:37,0:31:99:179,0,1851
chr10	8430153	.	CT	C	630.51	PASS	AB=0.839;AC=13;AF=0.250;AN=52;BaseQRankSum=-1.854;DP=374;FS=2.940;HRun=1;HaplotypeScore=116.4677;InbreedingCoeff=-0.0683;MQ=37.13;MQ0=57;MQRankSum=1.218;QD=4.64;ReadPosRankSum=-2.142;VQSLOD=-0.2457;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:7:3.01:0,3,44	1/1:4,1:3:3.01:42,3,0	./.	./.	0/0:21,0:15:29.90:0,30,399	0/0:9,1:6:5.84:0,6,88	0/0:10,0:7:6:0,6,69	0/0:28,0:4:12.04:0,12,176	0/0:16,0:13:27.08:0,27,397	0/0:30,0:26:61.88:0,62,688	0/0:20,0:14:26.68:0,27,279	0/0:5,0:5:4.56:0,5,83	0/1:9,6:14:99:220,0,149	0/1:11,1:6:35.72:36,0,38	0/0:15,0:8:9.17:0,9,85	0/1:10,1:8:33.20:33,0,71	0/0:10,1:7:7.69:0,8,107	0/1:9,2:10:38.20:38,0,197	0/0:15,0:5:15.05:0,15,223	0/1:13,4:17:98.40:98,0,178	1/1:9,1:7:3.01:42,3,0	0/0:11,0:10:19.27:0,19,203	0/0:21,0:18:36.09:0,36,432	0/0:12,0:7:2.91:0,3,46	0/1:8,1:8:21.01:21,0,158	0/1:12,4:15:99:126,0,321	0/1:18,1:15:0.35:0,0,435	0/1:6,5:8:8.78:114,0,9
chr10	8430191	.	G	GCTAT	3577.12	PASS	AB=0.956;AC=37;AF=0.685;AN=54;BaseQRankSum=2.687;DP=282;FS=28.375;HRun=0;HaplotypeScore=106.7456;InbreedingCoeff=0.5708;MQ=49.04;MQ0=13;MQRankSum=-7.630;QD=20.32;ReadPosRankSum=-3.171;VQSLOD=1.3508;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,6:9:9.01:142,9,0	1/1:4,1:5:8.95:124,9,0	1/1:5,0:3:4.07:12,4,0	0/0:6,0:4:4.20:0,4,55	1/1:4,4:8:5.99:49,6,0	1/1:2,10:9:11.97:217,12,0	0/1:4,0:4:0:0,0,0	1/1:4,0:1:2.99:24,3,0	0/1:17,1:15:41.34:41,0,489	0/1:21,1:20:89:89,0,515	0/0:24,0:23:51.16:0,51,901	1/1:3,1:4:2.71:38,3,0	1/1:1,5:6:15.05:398,15,0	1/1:5,7:9:8.95:178,9,0	0/0:21,0:15:32.65:0,33,491	1/1:4,8:8:18.03:371,18,0	1/1:6,5:9:14.97:288,15,0	1/1:4,7:11:24.03:584,24,0	1/1:3,0:3:8.94:110,9,0	0/0:6,2:8:0:0,0,0	./.	0/0:13,0:12:15.03:0,15,229	0/0:26,0:24:35.59:0,36,531	0/0:6,0:5:6.01:0,6,112	1/1:4,3:7:12:154,12,0	1/1:3,3:5:14.99:242,15,0	1/1:5,4:8:20.85:314,21,0	1/1:3,2:5:11.96:202,12,0
chr10	8430200	.	C	CATCT	7851.17	PASS	AB=0.909;AC=33;AF=0.635;AN=52;BaseQRankSum=-6.967;DP=334;FS=15.789;HRun=0;HaplotypeScore=118.2837;InbreedingCoeff=0.7453;MQ=48.84;MQ0=11;MQRankSum=2.025;QD=33.41;ReadPosRankSum=3.222;VQSLOD=3.8291;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:10:18.03:0,18,280	0/0:5,0:5:15.05:0,15,234	0/0:7,0:3:8.39:0,8,98	0/0:6,0:4:0.97:0,1,21	0/0:12,0:12:15.05:0,15,245	0/0:16,0:13:20.77:0,21,347	./.	1/1:2,0:2:6.02:121,6,0	1/1:3,17:18:4.09:651,4,0	1/1:7,15:19:45.15:1128,45,0	1/1:5,22:25:60.21:1503,60,0	1/1:3,1:4:3.01:36,3,0	1/1:11,1:12:7.60:188,8,0	1/1:14,0:11:5.45:101,5,0	1/1:5,19:18:39.13:978,39,0	0/0:13,0:9:6.42:0,6,200	0/0:12,0:11:14.51:0,15,160	0/1:9,0:10:0.22:0,0,162	1/1:6,0:5:15.05:341,15,0	1/1:19,0:19:2.70:58,3,0	./.	1/1:9,6:14:18.06:451,18,0	1/1:3,24:25:45.15:1127,45,0	1/1:3,4:7:8.97:195,9,0	0/0:10,0:10:21.05:0,21,316	1/1:8,0:7:15.94:324,16,0	1/1:10,1:10:18.06:330,18,0	1/1:5,0:5:15.05:318,15,0
chr10	8430218	.	T	TG	463.07	PASS	AB=0.732;AC=9;AF=0.161;AN=56;BaseQRankSum=7.599;DP=429;FS=0.687;HRun=0;HaplotypeScore=163.6006;InbreedingCoeff=-0.1287;MQ=49.41;MQ0=6;MQRankSum=-8.142;QD=3.51;ReadPosRankSum=1.638;VQSLOD=2.9701;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:11:18.05:0,18,213	0/0:9,0:9:26.98:0,27,277	0/0:15,0:6:15:0,15,165	0/0:15,0:10:15.83:0,16,197	0/0:19,0:19:18.53:0,19,227	0/0:19,0:16:23.86:0,24,282	0/0:5,0:5:6.02:0,6,73	0/1:9,1:9:28.59:29,0,36	0/0:21,0:18:38.97:0,39,379	0/0:26,0:25:74.86:0,75,782	0/0:27,0:27:68.72:0,69,583	0/0:3,2:5:2.99:0,3,24	0/1:14,5:19:38.55:39,0,225	0/1:8,8:13:38.91:39,0,92	0/0:24,0:22:50.95:0,51,476	0/0:19,0:15:31.50:0,32,444	0/0:11,0:10:14.40:0,14,207	0/1:14,0:14:4.77:5,0,255	0/1:3,4:6:68.36:93,0,68	0/1:17,15:32:13.85:14,0,157	0/0:2,0:2:3.01:0,3,36	0/0:16,0:16:26.77:0,27,246	0/0:27,0:27:51.13:0,51,412	0/0:11,0:10:18.03:0,18,214	0/0:13,0:13:29.79:0,30,357	0/1:8,6:13:99:143,0,140	0/1:7,8:14:41.81:126,0,42	0/1:1,4:5:2.21:112,0,2
chr10	8430219	.	CATCT	C	5367.80	PASS	AB=0.783;AC=35;AF=0.625;AN=56;BaseQRankSum=-1.237;DP=431;FS=11.736;HRun=0;HaplotypeScore=160.8437;InbreedingCoeff=0.7002;MQ=49.40;MQ0=6;MQRankSum=-3.262;QD=21.56;ReadPosRankSum=-3.450;VQSLOD=3.2922;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,11:11:17.98:300,18,0	1/1:2,7:9:27.09:454,27,0	0/0:15,0:6:15.02:0,15,251	0/0:15,0:10:17.95:0,18,354	1/1:1,18:19:20.93:345,21,0	1/1:5,13:16:20.19:324,20,0	1/1:1,5:6:6.02:101,6,0	1/1:1,9:9:18.05:255,18,0	0/0:21,0:18:36.12:0,36,891	0/0:26,0:25:66.18:0,66,1582	0/0:27,0:27:69.24:0,69,1706	1/1:3,2:5:2.88:51,3,0	1/1:6,12:19:26.29:418,26,0	1/1:8,5:13:14.92:205,15,0	0/0:24,0:22:54.19:0,54,1339	1/1:2,17:16:35.02:616,35,0	0/1:3,7:10:17.53:173,0,18	0/1:6,5:14:20.07:233,0,20	1/1:6,1:6:15.05:232,15,0	1/1:15,17:32:15.80:286,16,0	1/1:1,1:2:3.01:51,3,0	0/0:15,0:16:23.63:0,24,536	0/0:26,0:27:51.18:0,51,1241	0/0:11,0:10:18.06:0,18,448	1/1:0,13:13:30.10:505,30,0	1/1:7,6:13:14.11:434,14,0	1/1:9,6:14:20.56:255,21,0	0/1:5,0:5:9.36:131,0,9
chr10	8430297	.	CATCT	C	2911.57	PASS	AB=0.758;AC=20;AF=0.435;AN=46;BaseQRankSum=3.744;DP=572;FS=4.509;HRun=0;HaplotypeScore=153.0108;InbreedingCoeff=0.6254;MQ=51.75;MQ0=7;MQRankSum=2.662;QD=12.55;ReadPosRankSum=2.366;VQSLOD=2.8075;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:10,0:11:2.37:8,2,0	./.	./.	./.	0/0:22,0:22:2.46:0,2,10	0/1:5,0:22:0:0,0,0	0/0:15,0:13:5.27:0,5,21	0/0:32,0:30:9.03:0,9,134	1/1:12,6:17:36.09:526,36,0	1/1:19,12:31:48.16:738,48,0	0/1:11,14:24:43.09:345,0,43	0/0:14,0:14:24.08:0,24,507	0/0:32,0:31:36.12:0,36,772	0/0:15,0:21:24.95:0,25,391	1/1:13,6:18:18.06:278,18,0	1/1:8,0:27:3:28,3,0	0/1:7,0:6:0.01:0,0,0	./.	0/1:15,4:15:99:244,0,185	0/0:46,0:47:56.92:0,57,1123	1/1:6,5:10:11.35:186,11,0	0/0:23,0:22:36.10:0,36,760	1/1:16,10:26:35.88:537,36,0	1/1:9,3:14:11.99:186,12,0	./.	0/0:35,0:35:54.17:0,54,1097	0/0:30,0:30:50.43:0,50,1053	0/0:5,0:5:12.04:0,12,218
chr10	8432689	.	G	GGT	49.12	PASS	AB=0.943;AC=5;AF=0.119;AN=42;BaseQRankSum=-2.700;DP=566;FS=0.000;HRun=0;HaplotypeScore=122.4606;InbreedingCoeff=0.1892;MQ=67.41;MQ0=10;MQRankSum=2.342;QD=0.49;ReadPosRankSum=-0.089;VQSLOD=1.6383;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:2.68:0,3,14	./.	./.	0/1:35,0:19:0:0,0,0	0/1:20,0:19:0:0,0,0	0/0:19,0:18:11.32:0,11,56	0/0:36,0:35:17.04:0,17,84	./.	0/1:19,4:22:19.36:120,0,19	0/0:17,0:17:3:0,3,32	0/0:7,0:7:2.84:0,3,14	0/0:25,0:25:5.68:0,6,28	0/0:25,0:25:6.33:0,6,30	0/0:27,0:27:0:0,0,0	0/0:14,0:14:6.02:0,6,64	0/0:19,0:19:11.36:0,11,56	1/1:21,0:20:0.47:1,0,0	./.	./.	0/0:11,0:11:2.84:0,3,14	0/0:27,0:25:0.89:0,1,2	0/0:18,0:18:6:0,6,64	./.	0/0:38,0:38:2.98:0,3,289	0/0:17,0:17:8.52:0,9,42	0/0:31,0:30:5.26:0,5,28	0/0:10,0:10:5.68:0,6,28	./.
chr10	8434067	.	GA	G	6422.67	PASS	AB=0.917;AC=35;AF=0.625;AN=56;BaseQRankSum=6.229;DP=358;FS=2.151;HRun=5;HaplotypeScore=59.8620;InbreedingCoeff=0.9267;MQ=77.65;MQ0=0;MQRankSum=-1.771;QD=27.68;ReadPosRankSum=0.719;VQSLOD=4.9166;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:36.12:0,36,492	0/0:5,0:5:15.05:0,15,205	0/0:12,0:11:18.48:0,18,221	0/0:15,0:13:34.35:0,34,446	0/0:15,0:15:39.12:0,39,517	0/0:15,0:15:36.06:0,36,454	0/0:6,0:6:15.05:0,15,205	1/1:2,34:36:99:1136,102,0	1/1:2,14:16:45.08:495,45,0	1/1:0,10:10:30.09:340,30,0	1/1:0,11:11:30.09:339,30,0	1/1:1,11:12:36.09:397,36,0	1/1:3,9:12:27.03:292,27,0	1/1:1,11:12:33.09:374,33,0	1/1:2,13:15:33.01:357,33,0	0/1:10,1:11:0.90:1,0,377	0/0:17,0:17:42.10:0,42,560	0/0:21,0:21:51.15:0,51,680	1/1:3,17:20:48.09:529,48,0	1/1:4,8:12:27.06:296,27,0	1/1:1,9:10:24.07:272,24,0	1/1:2,4:6:9.03:102,9,0	1/1:1,13:14:39.11:441,39,0	1/1:2,2:4:6.02:68,6,0	0/0:6,0:6:18.06:0,18,246	1/1:0,11:11:33.09:374,33,0	1/1:1,11:12:33.09:372,33,0	1/1:0,8:8:21.06:238,21,0
chr10	8434096	.	TA	T	472.61	PASS	AB=0.833;AC=15;AF=0.278;AN=54;BaseQRankSum=7.262;DP=223;FS=0.000;HRun=3;HaplotypeScore=68.2030;InbreedingCoeff=0.6010;MQ=53.62;MQ0=0;MQRankSum=-2.322;QD=8.92;ReadPosRankSum=-1.914;VQSLOD=0.2985;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:33.11:0,33,470	0/0:1,0:1:2.96:0,3,19	0/1:5,0:2:2.11:2,0,3	0/0:9,0:5:11.62:0,12,124	0/0:11,0:11:11.21:0,11,273	0/0:14,0:14:29.96:0,30,354	0/1:1,1:2:31.07:31,0,35	0/0:26,0:26:25.61:0,26,864	1/1:3,4:7:20.24:142,20,0	1/1:3,3:6:17.40:100,17,0	1/1:6,4:10:18.71:107,19,0	0/0:8,0:8:12.76:0,13,168	0/0:4,0:4:10.58:0,11,128	0/0:7,0:7:17.22:0,17,234	1/1:4,2:6:8.31:63,8,0	0/0:6,0:6:14.85:0,15,166	0/0:17,0:17:25.49:0,25,500	0/0:16,0:16:38.82:0,39,354	0/0:11,0:11:9.45:0,9,264	0/0:6,0:6:6.12:0,6,50	0/0:7,0:7:13.58:0,14,153	./.	1/1:5,6:11:22:146,22,0	1/1:0,1:1:0.89:2,1,0	0/0:3,0:3:8.98:0,9,102	0/1:4,1:5:29.54:49,0,30	0/0:3,0:3:4.56:0,5,46	0/0:8,0:8:15.25:0,15,141
chr10	8434097	.	AAATAATAAT	A	3172.69	PASS	AB=1.000;AC=31;AF=0.574;AN=54;BaseQRankSum=3.042;DP=226;FS=0.741;HRun=0;HaplotypeScore=94.1123;InbreedingCoeff=0.6363;MQ=53.21;MQ0=0;MQRankSum=-4.134;QD=24.98;ReadPosRankSum=-1.556;VQSLOD=2.8727;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:27.09:0,27,1135	0/0:0,0:1:3.01:0,3,118	0/0:5,0:2:2.22:0,2,7	0/0:9,0:5:3.01:0,3,34	0/0:4,0:11:24.07:0,24,714	0/0:7,0:15:18.06:0,18,666	0/0:2,0:2:3.01:0,3,44	1/1:26,1:27:15.05:346,15,0	1/1:7,0:7:12.04:250,12,0	1/1:6,0:6:9.03:187,9,0	0/1:11,0:11:13.24:232,0,13	1/1:5,2:7:6.02:145,6,0	1/1:3,1:4:3.01:84,3,0	1/1:6,2:8:9.03:187,9,0	1/1:6,0:6:6.02:125,6,0	0/0:3,0:6:9.03:0,9,333	0/0:10,0:19:27.09:0,27,699	0/0:7,0:16:21.07:0,21,822	1/1:8,3:11:15.05:358,15,0	1/1:1,4:5:6.02:167,6,0	1/1:6,2:8:9.03:178,9,0	./.	1/1:10,0:10:21.06:357,21,0	1/1:1,0:1:3.01:49,3,0	0/0:2,0:3:6.02:0,6,198	1/1:3,2:5:9.03:229,9,0	1/1:2,1:3:3.01:84,3,0	1/1:4,4:8:18.03:382,18,0
chr10	8434101	.	AAT	A	340.23	PASS	AB=0.884;AC=15;AF=0.268;AN=56;BaseQRankSum=9.294;DP=225;FS=3.982;HRun=0;HaplotypeScore=74.1417;InbreedingCoeff=0.0965;MQ=53.88;MQ0=0;MQRankSum=-4.431;QD=4.42;ReadPosRankSum=2.925;VQSLOD=2.1494;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:33.11:0,33,575	0/0:1,0:1:3.01:0,3,38	0/1:4,0:2:5.05:9,0,5	0/0:8,0:4:5.85:0,6,68	0/0:11,0:11:33.11:0,33,456	0/0:15,0:15:30.10:0,30,436	0/0:2,0:2:3.01:0,3,51	0/0:28,0:28:68.95:0,69,812	1/1:1,4:5:13.95:84,14,0	0/1:5,3:8:14.02:99,0,14	0/1:10,4:14:22.15:97,0,22	0/0:6,0:6:6.65:0,7,118	0/0:3,0:3:0.76:0,1,66	0/0:7,0:7:17.85:0,18,179	1/1:4,2:6:6.49:49,6,0	0/0:6,0:6:15.05:0,15,188	0/0:21,0:21:54.17:0,54,686	0/0:17,0:17:36.11:0,36,445	0/1:8,0:8:3.91:4,0,100	0/1:5,0:5:7.50:8,0,29	0/0:6,0:6:6.42:0,6,129	0/0:1,0:1:1.25:0,1,3	0/1:5,6:11:10.63:91,0,11	1/1:1,1:2:1.82:5,2,0	0/0:4,0:4:12.04:0,12,170	0/1:3,1:4:15.98:28,0,16	0/1:2,0:2:2.24:2,0,32	0/1:8,0:8:11.97:12,0,93
chr10	8434106	.	T	TA	628.04	PASS	AB=0.938;AC=18;AF=0.321;AN=56;BaseQRankSum=4.388;DP=210;FS=10.117;HRun=2;HaplotypeScore=65.9439;InbreedingCoeff=-0.0053;MQ=55.19;MQ0=0;MQRankSum=-3.128;QD=6.54;ReadPosRankSum=-0.497;VQSLOD=-0.4166;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:33.10:0,33,407	1/1:1,0:1:0.47:1,0,0	0/0:5,0:3:1.85:0,2,33	0/0:6,0:3:3:0,3,26	0/0:12,0:12:22.26:0,22,261	0/0:14,0:14:16.95:0,17,221	0/0:1,0:1:3.01:0,3,37	0/1:17,6:23:99:240,0,466	1/1:5,0:5:1.50:8,2,0	0/1:6,0:6:1.40:1,0,47	0/1:13,0:13:32.94:53,0,33	0/1:5,0:5:34.16:73,0,34	0/0:2,0:2:5.50:0,6,46	0/1:4,1:5:71.26:71,0,92	0/1:6,0:6:8.69:15,0,9	0/0:4,0:4:2.06:0,2,36	0/0:23,0:23:34.29:0,34,415	0/0:17,0:17:16.34:0,16,221	0/0:8,0:8:15.73:0,16,108	0/0:4,0:4:4.99:0,5,17	0/1:2,1:3:0.22:68,0,0	0/0:1,0:1:2.98:0,3,21	0/1:10,0:10:18.69:44,0,19	1/1:2,0:2:3:26,3,0	0/0:5,0:5:11.57:0,12,148	1/1:3,0:3:7.82:45,8,0	0/1:4,0:4:34.34:51,0,34	0/1:10,0:10:77.30:77,0,78
chr10	8434110	.	AAT	A	842.79	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=9.732;DP=220;FS=2.841;HRun=0;HaplotypeScore=67.4978;InbreedingCoeff=0.4250;MQ=52.71;MQ0=0;MQRankSum=-7.792;QD=11.24;ReadPosRankSum=2.262;VQSLOD=3.3994;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:27.09:0,27,500	0/0:1,0:1:3.01:0,3,38	0/0:5,0:3:9.01:0,9,93	0/1:7,0:3:2.19:2,0,32	0/0:13,0:13:33.11:0,33,467	0/0:17,0:17:33.11:0,33,472	0/0:1,0:1:3.01:0,3,54	0/0:24,0:24:59.01:0,59,776	1/1:4,1:5:14.96:126,15,0	1/1:5,0:5:13.57:119,14,0	1/1:10,2:12:27.04:279,27,0	0/1:4,0:4:0.94:1,0,40	0/1:2,0:2:3.76:4,0,32	0/0:5,0:5:14.73:0,15,140	1/1:5,1:6:14.91:137,15,0	0/0:6,0:6:15.05:0,15,188	0/0:22,0:22:51.16:0,51,650	0/0:17,0:17:42.13:0,42,529	0/0:11,0:11:3.49:0,3,221	0/1:5,0:5:10.50:10,0,29	0/1:3,0:3:0.71:1,0,68	1/1:1,0:1:3.01:36,3,0	1/1:9,0:9:26.83:233,27,0	1/1:2,0:2:2.99:24,3,0	0/0:5,0:5:15.05:0,15,207	0/1:4,0:4:26.07:35,0,26	0/0:6,0:6:8.30:0,8,153	0/1:10,0:10:11.94:12,0,157
chr10	8434112	.	TAATAATAATAA	T	2762.37	PASS	AB=0.978;AC=23;AF=0.411;AN=56;BaseQRankSum=9.188;DP=218;FS=2.707;HRun=0;HaplotypeScore=95.7535;InbreedingCoeff=0.2357;MQ=52.39;MQ0=0;MQRankSum=-7.284;QD=25.11;ReadPosRankSum=1.844;VQSLOD=2.4146;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:27.09:0,27,1516	0/0:1,0:1:3.01:0,3,158	0/0:5,0:3:9.02:0,9,124	0/0:7,0:3:6.02:0,6,95	0/0:11,0:11:33.11:0,33,1261	0/0:17,0:17:36.11:0,36,1249	0/0:1,0:1:3.01:0,3,89	0/1:23,0:23:6.09:6,0,590	1/1:1,4:5:15.05:402,15,0	1/1:2,3:7:21.04:409,21,0	1/1:6,4:11:32.26:577,32,0	0/1:3,0:3:13.98:17,0,14	0/1:2,0:2:16.99:17,0,54	0/0:5,0:5:1.99:0,2,94	1/1:2,2:5:12.02:245,12,0	0/0:6,0:6:15.05:0,15,534	0/0:22,0:22:51.51:0,52,1536	0/0:17,0:17:42.14:0,42,1615	0/1:11,0:11:99:130,0,217	0/1:5,0:5:36.73:37,0,50	0/1:3,0:3:17.21:17,0,21	1/1:4,0:5:15.02:196,15,0	1/1:0,6:9:27.07:621,27,0	1/1:0,1:2:3.01:75,3,0	0/0:6,0:6:18.06:0,18,589	0/1:3,1:4:47.70:125,0,48	0/1:5,0:5:7.76:8,0,143	0/1:10,0:10:64.26:64,0,148
chr10	8434121	.	TAA	T	1621.35	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=8.201;DP=240;FS=7.512;HRun=2;HaplotypeScore=66.7800;InbreedingCoeff=0.5634;MQ=54.00;MQ0=0;MQRankSum=-6.820;QD=20.79;ReadPosRankSum=3.806;VQSLOD=1.4924;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:27.09:0,27,526	0/0:1,0:1:3.01:0,3,41	0/0:4,0:3:8.96:0,9,95	0/0:5,0:3:6.02:0,6,70	0/0:12,0:12:36.12:0,36,532	0/0:17,0:17:36.12:0,36,539	0/0:3,0:3:9.03:0,9,134	0/0:26,0:26:65.38:0,65,817	1/1:5,1:6:18.05:217,18,0	1/1:3,7:10:30.08:388,30,0	1/1:6,4:10:29.92:361,30,0	0/0:4,0:4:2.59:0,3,69	0/1:2,0:2:3.29:3,0,12	0/0:5,0:5:14.70:0,15,124	1/1:3,2:5:15.05:196,15,0	0/0:7,0:7:18.06:0,18,239	0/0:22,0:22:54.64:0,55,723	0/0:19,0:19:48.10:0,48,615	0/0:12,0:12:8.29:0,8,307	0/1:7,0:7:3.37:3,0,103	0/1:3,0:3:0.22:0,0,72	1/1:0,7:7:17.98:234,18,0	1/1:7,3:10:30.01:339,30,0	1/1:1,1:2:2.98:21,3,0	0/0:8,0:8:24.07:0,24,324	0/1:6,0:6:36.04:36,0,89	0/0:7,0:7:11.80:0,12,206	0/1:10,0:10:6.89:7,0,177
chr10	8434123	.	A	AT	1339.60	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=5.741;DP=242;FS=6.086;HRun=1;HaplotypeScore=64.3371;InbreedingCoeff=0.7984;MQ=56.97;MQ0=0;MQRankSum=-4.467;QD=25.28;ReadPosRankSum=0.546;VQSLOD=3.2863;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:27.02:0,27,329	0/0:1,0:1:0.89:0,1,2	0/0:4,0:4:8.86:0,9,92	0/0:5,0:3:6.02:0,6,64	0/0:13,0:13:29:0,29,275	0/0:17,0:17:30.11:0,30,357	0/0:3,0:3:9.03:0,9,116	0/0:23,0:23:62.87:0,63,780	1/1:5,1:6:17.53:152,18,0	1/1:10,0:10:29.64:330,30,0	1/1:8,2:10:29.34:332,29,0	0/0:4,0:4:11.70:0,12,109	0/0:1,0:1:2.68:0,3,11	0/0:4,0:4:8.86:0,9,110	1/1:4,1:5:14.62:156,15,0	0/0:7,0:7:14.53:0,15,160	0/0:21,0:21:42.90:0,43,470	0/0:19,0:19:33.37:0,33,331	0/0:13,0:13:32.11:0,32,344	0/0:8,0:8:17.38:0,17,164	0/0:3,0:3:8.70:0,9,89	1/1:7,0:7:17.98:234,18,0	1/1:12,1:13:34.89:303,35,0	1/1:2,0:2:2.84:14,3,0	0/0:7,0:7:18.94:0,19,235	0/0:6,0:6:1.32:0,1,112	0/0:10,0:10:23.72:0,24,256	0/0:10,0:10:22.75:0,23,200
chr10	8434952	.	T	TACACAC	4176.11	PASS	AB=0.778;AC=35;AF=0.648;AN=54;BaseQRankSum=1.480;DP=581;FS=9.826;HRun=0;HaplotypeScore=131.8349;InbreedingCoeff=0.7566;MQ=68.58;MQ0=13;MQRankSum=-2.596;QD=11.38;ReadPosRankSum=-1.492;VQSLOD=2.1445;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:27,12:41:1.74:4,2,0	1/1:13,0:13:18.06:416,18,0	0/0:25,0:17:2.59:0,3,10	0/0:37,0:31:17.93:0,18,239	1/1:18,0:17:15.05:356,15,0	1/1:13,0:20:0.40:164,0,0	1/1:27,0:27:17.43:408,17,0	1/1:27,0:26:23.79:315,24,0	0/0:16,0:15:15.39:0,15,111	0/0:22,0:22:38.90:0,39,646	0/0:12,0:12:8.83:0,9,146	1/1:4,4:8:3.01:88,3,0	1/1:11,0:11:5.73:43,6,0	./.	0/0:20,0:20:24.04:0,24,372	1/1:20,8:26:4.91:21,5,0	1/1:18,0:18:27.95:523,28,0	1/1:10,0:17:18.06:397,18,0	1/1:16,0:16:18.90:304,19,0	1/1:21,0:21:7.73:205,8,0	1/1:15,0:15:8.95:132,9,0	0/0:27,0:27:33.36:0,33,538	0/0:10,0:10:6.02:0,6,117	0/0:29,0:26:36.59:0,37,675	0/1:20,0:28:0:0,0,0	1/1:28,0:28:23.02:353,23,0	1/1:11,10:22:9.03:154,9,0	1/1:8,0:7:17.73:292,18,0
chr10	8434982	.	CAGAGAG	C	485.52	PASS	AB=1.000;AC=13;AF=0.283;AN=46;BaseQRankSum=3.190;DP=530;FS=26.111;HRun=0;HaplotypeScore=109.5521;InbreedingCoeff=0.4980;MQ=44.83;MQ0=14;MQRankSum=-0.330;QD=3.19;ReadPosRankSum=2.189;VQSLOD=0.4736;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:9.03:0,9,183	0/1:16,0:16:26.71:27,0,279	./.	0/0:19,0:10:3.01:0,3,72	0/0:17,0:16:3.01:0,3,90	0/0:15,0:14:6.02:0,6,140	0/0:24,0:24:20.92:0,21,427	0/0:35,0:33:33.03:0,33,573	1/1:12,0:20:6.02:102,6,0	1/1:15,7:23:15.66:335,16,0	1/1:8,3:11:0.47:1,0,0	0/0:7,0:7:3.01:0,3,66	0/0:9,0:8:5.52:0,6,78	./.	1/1:12,18:31:1.73:25,2,0	0/0:27,0:24:15.52:0,16,408	0/0:19,0:19:21.07:0,21,483	0/0:18,0:18:24.08:0,24,507	0/0:25,0:22:11.84:0,12,151	./.	./.	1/1:17,4:21:6.02:124,6,0	./.	1/1:19,10:27:0.47:1,0,0	0/0:26,0:26:14.32:0,14,304	0/0:21,0:19:15.94:0,16,264	0/0:21,0:19:19.29:0,19,357	0/0:10,0:7:3.01:0,3,69
chr10	8435143	.	T	TTACA	1666.79	PASS	AB=0.545;AC=13;AF=0.232;AN=56;BaseQRankSum=-2.477;DP=556;FS=0.000;HRun=0;HaplotypeScore=107.5027;InbreedingCoeff=0.7754;MQ=72.56;MQ0=6;MQRankSum=2.301;QD=9.75;ReadPosRankSum=0.232;VQSLOD=2.4393;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:77.74:0,78,749	0/0:7,0:7:11.98:0,12,107	0/0:38,0:23:51.02:0,51,485	0/0:24,0:19:44.88:0,45,479	0/0:9,0:9:24.02:0,24,321	0/0:16,0:15:10.30:0,10,298	0/0:27,0:27:57.73:0,58,519	0/0:27,0:27:77.40:0,77,635	1/1:3,16:19:9.03:239,9,0	1/1:3,21:26:65.67:677,66,0	1/1:3,14:19:5.78:116,6,0	0/0:14,0:14:38.98:0,39,394	0/0:16,0:16:44.45:0,44,454	0/0:18,0:18:47.84:0,48,548	0/1:5,23:30:21.51:148,0,22	0/0:20,0:20:50.96:0,51,538	0/0:21,0:21:6.31:0,6,492	0/0:18,0:18:14.91:0,15,286	0/0:8,0:8:20.90:0,21,165	0/0:12,0:12:26.81:0,27,233	0/0:33,0:33:31.04:0,31,625	1/1:22,1:23:12.50:211,12,0	1/1:3,6:9:2.68:80,3,0	1/1:9,31:44:18.03:370,18,0	0/0:14,0:14:24.42:0,24,287	0/0:9,0:9:14.62:0,15,105	0/0:16,0:14:38.31:0,38,363	0/0:4,0:4:11.88:0,12,85
chr10	8435144	.	T	TACATAC	1312.04	PASS	AB=1.000;AC=14;AF=0.250;AN=56;BaseQRankSum=1.190;DP=588;FS=0.000;HRun=0;HaplotypeScore=135.8175;InbreedingCoeff=0.7442;MQ=69.71;MQ0=8;MQRankSum=1.985;QD=6.59;ReadPosRankSum=0.742;VQSLOD=2.0292;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:35:77.75:0,78,848	0/0:9,0:11:11.58:0,12,121	0/0:37,0:22:51.02:0,51,485	0/0:23,0:18:44.88:0,45,479	0/0:9,0:9:24.02:0,24,375	0/0:18,0:17:22.29:0,22,338	0/0:24,0:29:62.57:0,63,618	0/0:26,0:26:77.40:0,77,635	1/1:21,0:20:9.03:142,9,0	1/1:26,0:26:57.48:615,57,0	1/1:19,0:19:4.56:52,5,0	0/0:13,0:15:38.98:0,39,438	0/0:16,0:17:44.94:0,45,513	0/0:16,0:17:47.84:0,48,631	0/1:29,0:29:35.38:84,0,35	0/0:20,0:20:50.96:0,51,598	0/0:21,0:24:32.18:0,32,609	0/1:20,0:20:1.42:1,0,299	0/0:11,0:11:22.67:0,23,169	0/0:15,0:15:26.81:0,27,247	0/0:36,0:36:34.16:0,34,720	1/1:5,19:27:11.71:328,12,0	1/1:10,0:10:2.99:48,3,0	1/1:47,0:46:17.40:213,17,0	0/0:14,0:14:23.50:0,23,338	0/0:8,0:8:14.34:0,14,104	0/0:15,0:14:37.55:0,38,389	0/0:5,0:5:11.88:0,12,85
chr10	8436148	.	AAC	A	4951.97	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=9.080;DP=696;FS=2.676;HRun=0;HaplotypeScore=101.2751;InbreedingCoeff=0.9231;MQ=71.25;MQ0=10;MQRankSum=-3.017;QD=24.39;ReadPosRankSum=1.939;VQSLOD=5.7866;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,43:50:99:1215,99,0	1/1:3,2:5:9.03:112,9,0	0/0:54,0:22:31.69:0,32,381	0/0:36,0:13:9.50:0,10,143	1/1:3,15:18:30.10:375,30,0	1/1:2,14:16:39.12:488,39,0	1/1:4,28:32:72.23:901,72,0	0/0:23,1:23:7.59:0,8,588	0/0:22,1:23:48.16:0,48,789	0/0:22,0:22:48.16:0,48,770	0/0:14,0:14:30.10:0,30,495	0/0:26,0:26:57.16:0,57,908	0/0:29,0:29:75.26:0,75,1229	0/0:32,0:32:75.26:0,75,1207	0/0:27,0:27:78.26:0,78,1269	1/1:3,26:29:13.62:701,14,0	1/1:6,13:19:36.11:447,36,0	1/1:2,13:15:33.11:413,33,0	0/0:19,0:19:45.13:0,45,710	0/0:17,0:17:18.05:0,18,270	0/0:31,2:33:0.25:0,0,1048	0/0:26,0:26:72.25:0,72,1176	0/0:22,0:22:45.15:0,45,737	0/0:31,0:31:54.95:0,55,1235	1/1:2,16:18:24.08:300,24,0	0/0:33,2:35:18.22:0,18,1298	0/0:15,0:14:39.13:0,39,625	0/0:8,0:8:15.05:0,15,247
chr10	8436227	.	A	AGAGAGG	5984.40	PASS	AB=1.000;AC=42;AF=0.750;AN=56;BaseQRankSum=-5.329;DP=628;FS=73.711;HRun=0;HaplotypeScore=156.6532;InbreedingCoeff=-0.1277;MQ=45.42;MQ0=27;MQRankSum=-2.179;QD=10.01;ReadPosRankSum=3.752;VQSLOD=1.5024;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:50,0:48:62.40:704,62,0	1/1:12,0:12:6.29:170,6,0	0/0:30,0:7:10.96:0,11,69	0/1:62,0:6:1.13:1,0,13	1/1:19,1:20:7.34:214,7,0	1/1:13,0:12:18.36:222,18,0	1/1:30,0:31:32.72:494,33,0	1/1:32,0:30:39.12:404,39,0	1/1:12,0:11:12.44:116,12,0	0/1:23,0:23:75.88:164,0,76	1/1:11,0:10:7.22:128,7,0	0/1:19,0:19:31.59:32,0,432	0/1:23,0:22:99:163,0,263	0/1:26,0:26:99:238,0,345	0/1:21,0:20:43.45:180,0,43	1/1:17,1:19:31.98:430,32,0	1/1:15,2:18:21.34:406,21,0	1/1:10,1:12:5.04:289,5,0	0/1:23,0:22:99:117,0,182	0/1:24,0:23:98.34:98,0,230	1/1:26,0:25:25.72:314,26,0	1/1:18,0:16:17.98:126,18,0	1/1:12,0:11:17.01:96,17,0	0/1:21,0:20:27.35:113,0,27	1/1:18,0:17:30.62:279,31,0	0/1:27,0:26:99:255,0,228	0/1:14,0:13:32.17:123,0,32	0/1:11,0:9:24.06:109,0,24
chr10	8436231	.	A	AGG	4497.59	PASS	AB=0.990;AC=33;AF=0.589;AN=56;BaseQRankSum=-2.138;DP=608;FS=85.040;HRun=1;HaplotypeScore=112.9535;InbreedingCoeff=-0.4983;MQ=44.68;MQ0=27;MQRankSum=-2.026;QD=7.71;ReadPosRankSum=3.950;VQSLOD=0.0252;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:50,0:48:13.47:406,13,0	0/1:13,0:13:28.55:76,0,29	0/0:25,0:6:8.92:0,9,64	0/1:52,0:4:0.87:1,0,14	0/1:20,0:20:1.55:138,0,2	0/1:13,0:12:5.94:149,0,6	0/1:30,2:32:44.97:298,0,45	0/1:28,0:26:37.56:342,0,38	1/1:11,0:10:3.50:48,3,0	0/1:26,0:26:99:182,0,123	0/1:12,0:11:42.63:73,0,43	0/1:17,0:17:33.09:33,0,180	0/1:23,0:22:76.71:197,0,77	0/1:27,0:27:99:241,0,137	1/1:20,0:19:15.51:223,16,0	0/1:20,0:20:18.89:173,0,19	0/1:18,0:18:2.97:216,0,3	0/1:13,0:13:12.55:149,0,13	0/1:22,0:21:99:110,0,144	0/1:23,0:22:83.80:84,0,140	1/1:26,0:25:23:305,23,0	0/1:17,0:15:26.18:109,0,26	0/1:11,0:10:42.63:46,0,43	1/1:20,0:19:30.61:179,31,0	0/1:16,3:18:30.04:236,0,30	0/1:25,0:24:99:253,0,129	0/1:13,0:12:43.73:115,0,44	1/1:11,0:9:4.15:114,4,0
chr10	8436501	.	A	AACTCTGGAACCCATCTTCCCACTGCT	2870.49	PASS	AB=0.769;AC=25;AF=0.962;AN=26;BaseQRankSum=0.361;DP=43;FS=9.467;HRun=0;HaplotypeScore=39.0210;InbreedingCoeff=-0.2064;MQ=160.27;MQ0=0;MQRankSum=-1.871;QD=79.74;ReadPosRankSum=1.477;VQSLOD=0.7109;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	1/1:1,0:1:3:27,3,0	1/1:5,1:7:7.07:689,7,0	0/1:7,0:10:31.70:1206,0,32	1/1:1,0:1:3.01:50,3,0	./.	./.	1/1:1,0:1:2.98:21,3,0	./.	1/1:1,0:1:3:26,3,0	1/1:1,0:1:3:27,3,0	./.	./.	1/1:5,0:5:9.02:494,9,0	./.	./.	./.	1/1:2,0:2:2.99:24,3,0	./.	1/1:1,0:1:3:25,3,0	./.	1/1:3,0:3:3:25,3,0	./.	./.	./.	./.	1/1:2,0:2:2.98:21,3,0	1/1:1,0:1:3.01:318,3,0
chr10	8437780	.	GTGTGTGTGTGTGTA	G	997.41	PASS	AB=0.987;AC=15;AF=0.375;AN=40;BaseQRankSum=-2.341;DP=403;FS=0.000;HRun=0;HaplotypeScore=166.5860;InbreedingCoeff=0.0893;MQ=32.61;MQ0=17;MQRankSum=-3.220;QD=4.75;ReadPosRankSum=2.070;VQSLOD=2.6549;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:11,0:11:3.55:4,0,36	0/0:11,0:10:6.02:0,6,220	./.	./.	0/0:21,0:21:15.05:0,15,492	0/0:18,0:15:3.01:0,3,42	0/1:29,0:22:0.13:0,0,0	0/1:28,0:19:84.97:108,0,85	1/1:23,0:21:17.92:343,18,0	0/1:22,1:20:14.83:573,0,15	0/1:19,1:20:0:0,0,1	./.	0/0:12,0:12:3.01:0,3,35	0/0:13,0:13:2.37:0,2,8	1/1:17,4:21:0.35:1,0,0	0/0:13,0:12:6.02:0,6,227	0/0:11,0:11:0.78:0,1,203	0/0:9,0:9:7.90:0,8,333	0/1:6,0:6:5.12:5,0,47	./.	./.	1/1:22,3:24:0.65:2,1,0	./.	./.	0/0:20,0:18:9.03:0,9,370	0/1:11,0:9:57.43:57,0,136	1/1:13,0:11:0.87:14,1,0	./.
chr10	8437782	.	GTGTGTGTGTGTA	G	1255.49	PASS	AB=0.985;AC=16;AF=0.381;AN=42;BaseQRankSum=-2.248;DP=329;FS=2.006;HRun=0;HaplotypeScore=114.1329;InbreedingCoeff=0.0364;MQ=34.40;MQ0=16;MQRankSum=-3.503;QD=7.56;ReadPosRankSum=2.625;VQSLOD=2.1763;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:8,0:8:3.14:3,0,36	0/0:7,0:6:6.02:0,6,173	./.	./.	0/0:15,0:15:15.01:0,15,389	0/0:13,0:10:6.01:0,6,70	0/0:23,0:16:2.86:0,3,24	0/1:28,0:21:53.91:140,0,54	1/1:19,3:20:20.81:496,21,0	0/1:16,1:14:5.93:597,0,6	0/1:13,1:14:0:0,0,1	./.	0/0:12,0:12:3.01:0,3,35	0/0:14,0:14:2.37:0,2,8	1/1:12,2:14:0.35:1,0,0	0/0:8,0:7:6.49:0,6,212	0/1:9,0:9:0.20:0,0,197	0/1:5,0:5:8.94:9,0,263	0/1:5,0:5:11.21:11,0,32	./.	0/0:7,0:2:2.94:0,3,18	1/1:18,0:17:0.67:2,1,0	./.	./.	0/0:14,0:12:8.90:0,9,294	0/1:12,0:10:68.69:97,0,69	1/1:14,0:12:0.99:14,1,0	./.
chr10	8437784	.	GTGTGTGTGTA	G	1230.99	PASS	AB=0.982;AC=19;AF=0.452;AN=42;BaseQRankSum=-1.730;DP=336;FS=0.976;HRun=0;HaplotypeScore=112.9274;InbreedingCoeff=0.2894;MQ=34.67;MQ0=17;MQRankSum=-2.930;QD=6.48;ReadPosRankSum=2.707;VQSLOD=1.9413;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:7,0:7:3.14:3,0,36	0/0:7,0:6:6.02:0,6,126	./.	./.	0/0:15,0:15:14.90:0,15,285	0/0:13,0:10:4.56:0,5,46	0/1:23,0:16:0.14:0,0,0	0/1:30,0:23:1.63:185,0,2	1/1:22,0:20:20.79:398,21,0	0/1:16,1:14:0:506,0,0	0/1:12,1:13:0:0,0,1	./.	0/0:12,0:12:2.92:0,3,17	0/0:15,0:15:1.25:0,1,3	1/1:14,0:14:0.35:1,0,0	0/0:8,0:7:6.02:0,6,187	0/0:9,0:9:1.42:0,1,140	0/1:5,0:5:8.94:9,0,204	0/1:5,0:5:11.10:31,0,11	./.	1/1:9,0:4:3.48:12,3,0	1/1:15,3:17:0.05:1,0,0	./.	./.	0/0:14,0:12:8.90:0,9,220	1/1:12,0:10:21.30:184,21,0	1/1:15,0:13:4.76:23,5,0	./.
chr10	8437786	.	GTGTGTGTA	G	1627.03	PASS	AB=1.000;AC=31;AF=0.738;AN=42;BaseQRankSum=-2.413;DP=345;FS=1.018;HRun=0;HaplotypeScore=112.6841;InbreedingCoeff=0.1068;MQ=35.33;MQ0=17;MQRankSum=-2.040;QD=5.98;ReadPosRankSum=0.624;VQSLOD=1.9749;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:8,0:8:3.14:3,0,36	0/0:7,0:6:6.02:0,6,79	./.	./.	0/0:14,0:14:11.84:0,12,174	0/1:15,0:12:32.74:35,0,33	1/1:23,0:16:2.81:24,3,0	1/1:31,0:24:35.41:295,35,0	1/1:22,1:21:23.79:317,24,0	1/1:15,2:14:6.79:464,7,0	0/1:13,0:13:0:0,0,0	./.	1/1:12,0:12:0.47:1,0,0	1/1:15,0:15:2.87:15,3,0	1/1:11,3:14:0.07:1,0,0	0/1:9,0:8:14.94:15,0,137	0/1:10,0:10:18.44:18,0,126	0/1:6,0:6:27.92:28,0,144	1/1:5,0:5:5.85:77,6,0	./.	1/1:9,0:4:5.78:35,6,0	1/1:17,3:19:5.70:46,6,0	./.	./.	0/1:15,0:13:13.44:13,0,134	1/1:3,9:10:29.92:333,30,0	1/1:15,0:13:5.87:35,6,0	./.
chr10	8437788	.	GTGTGTA	G	1730.87	PASS	AB=1.000;AC=32;AF=0.762;AN=42;BaseQRankSum=-2.513;DP=356;FS=0.000;HRun=0;HaplotypeScore=114.0426;InbreedingCoeff=-0.1181;MQ=35.75;MQ0=17;MQRankSum=-0.802;QD=5.81;ReadPosRankSum=-0.351;VQSLOD=2.2117;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:9,0:9:20.17:20,0,28	0/0:7,0:6:5.21:0,5,31	./.	./.	0/1:14,0:14:13.08:13,0,70	0/1:15,0:12:26.77:35,0,27	1/1:23,0:16:2.88:24,3,0	1/1:32,0:25:46.92:334,47,0	1/1:23,1:22:23.68:247,24,0	1/1:18,0:15:2.81:351,3,0	0/1:13,0:13:0:0,0,0	./.	1/1:0,12:12:2.94:18,3,0	1/1:0,15:15:3:33,3,0	1/1:20,0:20:6.19:49,6,0	0/1:9,0:8:14.94:15,0,108	0/1:12,0:12:39.07:39,0,68	0/1:6,0:6:27.96:28,0,84	1/1:1,3:4:8.82:102,9,0	./.	1/1:9,0:4:5.82:36,6,0	1/1:21,0:20:8.60:62,9,0	./.	./.	0/1:15,0:13:16.28:16,0,62	1/1:12,0:10:29.96:389,30,0	1/1:0,15:14:6.41:45,6,0	./.
chr10	8438854	.	GT	G	6856.39	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=12.769;DP=797;FS=0.300;HRun=4;HaplotypeScore=88.4581;InbreedingCoeff=0.9999;MQ=76.30;MQ0=0;MQRankSum=-6.472;QD=33.94;ReadPosRankSum=1.654;VQSLOD=5.1760;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,138,1914	0/0:13,0:13:39.13:0,39,546	0/0:16,0:15:42.13:0,42,574	0/0:20,0:20:51.01:0,51,647	0/0:39,0:39:99:0,117,1638	0/0:26,0:26:78.24:0,78,1074	0/0:18,0:18:51.17:0,51,712	0/0:34,0:34:93.30:0,93,1288	1/1:0,26:26:69.21:828,69,0	1/1:1,36:37:99:1283,108,0	1/1:0,28:28:81.25:968,81,0	0/0:32,0:32:96.31:0,96,1328	0/0:28,0:28:81.27:0,81,1133	0/0:39,0:39:99:0,117,1621	1/1:1,30:31:87.27:1044,87,0	0/0:34,0:34:96.27:0,96,1305	0/0:23,0:22:69.23:0,69,965	0/0:21,0:20:63.21:0,63,879	0/0:21,0:21:60.17:0,60,791	0/0:36,0:36:99:0,108,1508	0/0:33,0:33:96.32:0,96,1344	1/1:1,30:31:87.27:1041,87,0	1/1:0,29:29:84.26:1008,84,0	1/1:1,19:20:57.17:684,57,0	0/0:37,0:37:99:0,102,1429	0/0:34,1:35:66.32:0,66,1334	0/0:34,0:34:99:0,99,1381	0/0:10,0:10:30.10:0,30,420
chr10	8442356	.	TTA	T	2044.33	PASS	AB=1.000;AC=19;AF=0.396;AN=48;BaseQRankSum=-7.139;DP=202;FS=6.612;HRun=0;HaplotypeScore=54.9357;InbreedingCoeff=0.6460;MQ=95.28;MQ0=1;MQRankSum=0.516;QD=18.76;ReadPosRankSum=2.496;VQSLOD=2.8922;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,9:11:24.08:295,24,0	1/1:1,2:3:3.01:37,3,0	0/0:14,0:11:6.38:0,6,55	0/1:34,0:16:11.31:11,0,128	1/1:1,4:5:9.03:111,9,0	1/1:0,10:10:30.09:369,30,0	1/1:0,2:2:6.02:74,6,0	0/0:11,0:34:80.73:0,81,731	0/0:1,0:3:6:0,6,51	0/0:0,0:2:6:0,6,53	./.	0/0:1,0:3:6:0,6,53	0/0:1,0:3:6:0,6,53	0/0:0,0:1:3:0,3,27	0/0:1,0:5:12.01:0,12,106	1/1:0,2:2:6.02:74,6,0	1/1:3,14:17:39.12:480,39,0	1/1:1,16:17:48.15:591,48,0	0/0:3,0:6:9:0,9,80	0/0:1,0:5:12.01:0,12,106	./.	./.	0/0:0,0:1:3:0,3,27	./.	1/1:1,5:8:17.72:176,18,0	0/0:2,0:3:5.04:0,5,33	0/0:1,0:2:6.01:0,6,69	0/0:4,0:8:15.02:0,15,155
chr10	8444243	.	AGT	A	3058.02	PASS	AC=48;AF=0.960;AN=50;BaseQRankSum=0.099;DP=644;FS=2.230;HRun=0;HaplotypeScore=169.6098;InbreedingCoeff=0.2215;MQ=68.56;MQ0=12;MQRankSum=1.907;QD=5.72;ReadPosRankSum=-1.161;VQSLOD=3.3774;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:22,17:43:35.36:304,35,0	1/1:6,7:13:9.02:99,9,0	./.	0/0:22,0:16:0.47:0,0,1	1/1:7,7:15:20.89:212,21,0	1/1:8,9:16:11.87:113,12,0	1/1:18,9:27:15.51:165,16,0	./.	1/1:7,0:10:5.68:28,6,0	1/1:17,0:22:11.83:57,12,0	1/1:14,0:18:2.84:14,3,0	1/1:10,0:27:20.97:116,21,0	1/1:16,0:25:19.67:95,20,0	1/1:6,0:20:15.40:91,15,0	1/1:10,0:20:19.89:98,20,0	1/1:8,5:13:8.86:80,9,0	1/1:16,21:39:38.77:390,39,0	1/1:12,28:40:54.58:622,55,0	1/1:13,0:19:14.20:70,14,0	1/1:5,0:11:2.84:14,3,0	./.	1/1:9,0:19:8.52:42,9,0	1/1:5,0:15:7.90:35,8,0	1/1:19,0:31:8.41:42,8,0	1/1:8,7:17:17.71:160,18,0	1/1:14,0:27:28.16:136,28,0	1/1:16,0:32:28.38:140,28,0	1/1:5,0:10:2.84:14,3,0
chr10	8444601	.	AT	A	602.59	PASS	AB=1.000;AC=15;AF=0.357;AN=42;BaseQRankSum=-2.824;DP=71;FS=8.827;HRun=1;HaplotypeScore=20.0379;InbreedingCoeff=0.5290;MQ=56.58;MQ0=8;MQRankSum=-4.831;QD=22.32;ReadPosRankSum=3.590;VQSLOD=2.9371;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:1,0:1:3.01:0,3,38	0/0:2,0:2:5.61:0,6,49	0/0:4,0:1:2.99:0,3,24	0/0:9,0:1:2.97:0,3,20	0/0:3,0:2:6.02:0,6,65	./.	0/0:1,0:1:3.01:0,3,38	0/0:2,0:2:6.02:0,6,76	1/1:0,5:5:15.02:181,15,0	1/1:1,5:6:15.05:200,15,0	1/1:0,4:4:6.02:80,6,0	0/1:1,0:1:0:0,0,0	0/0:1,0:1:3.01:0,3,30	0/0:1,0:1:3.01:0,3,33	1/1:0,6:6:17.90:161,18,0	./.	0/0:9,0:8:17.54:0,18,216	0/0:7,0:6:16.58:0,17,179	./.	./.	./.	./.	1/1:0,1:1:3.01:40,3,0	1/1:0,3:3:5.93:40,6,0	0/0:2,0:2:2.37:0,2,8	1/1:0,1:1:3.01:40,3,0	0/0:1,0:1:2.68:0,3,11	./.
chr10	8445625	.	ATTTT	A	8651.02	PASS	AB=0.569;AC=23;AF=0.411;AN=56;BaseQRankSum=-2.973;DP=698;FS=1.548;HRun=14;HaplotypeScore=126.7285;InbreedingCoeff=0.9049;MQ=68.32;MQ0=4;MQRankSum=-0.901;QD=27.38;ReadPosRankSum=9.915;VQSLOD=2.5880;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:34:36.08:0,36,624	0/0:4,0:9:15.68:0,16,321	0/0:14,0:12:23.99:0,24,352	0/0:10,0:10:6.13:0,6,179	1/1:8,25:34:55.13:767,55,0	0/0:8,0:33:55.43:0,55,1121	0/0:10,0:24:36.12:0,36,731	1/1:11,24:35:62.88:890,63,0	1/1:5,0:28:62.78:497,63,0	0/0:16,0:24:54.14:0,54,1025	0/0:9,0:25:57.20:0,57,1100	1/1:5,19:23:31.23:719,31,0	1/1:4,22:26:60.10:849,60,0	1/1:4,23:26:54.04:764,54,0	0/0:17,0:35:45.14:0,45,843	0/0:8,0:22:39.12:0,39,782	0/0:6,0:21:33.11:0,33,663	0/0:4,0:16:24.08:0,24,485	1/1:9,16:25:44.90:637,45,0	1/1:3,23:27:61.30:852,61,0	1/1:6,24:30:63.08:892,63,0	0/0:9,0:26:69.24:0,69,1374	0/0:13,0:27:36.83:0,37,760	0/0:12,0:35:34.88:0,35,649	0/0:9,0:24:36.11:0,36,675	0/1:7,25:33:99:936,0,156	1/1:2,19:19:48.11:679,48,0	1/1:0,5:5:12.04:170,12,0
chr10	8446499	.	G	GAGTT	10145.39	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-13.290;DP=748;FS=11.798;HRun=0;HaplotypeScore=111.5110;InbreedingCoeff=0.9998;MQ=77.66;MQ0=1;MQRankSum=-2.994;QD=64.21;ReadPosRankSum=2.747;VQSLOD=6.8973;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:96.33:0,96,1790	0/0:15,0:15:39.12:0,39,697	0/0:22,0:22:45.53:0,46,861	0/0:18,0:18:47.01:0,47,880	0/0:28,0:28:75.22:0,75,1323	0/0:21,0:21:60.19:0,60,1088	0/0:28,0:28:78.25:0,78,1423	0/0:31,0:31:84.28:0,84,1539	0/0:34,0:34:99:0,99,1840	1/1:2,15:16:45.15:1155,45,0	1/1:3,25:28:78.23:2004,78,0	0/0:24,0:24:66.21:0,66,1186	0/0:30,0:30:87.27:0,87,1543	0/0:29,0:29:81.26:0,81,1464	1/1:3,25:29:69.24:1838,69,0	0/0:27,0:27:78.24:0,78,1378	0/0:21,0:21:60.21:0,60,1120	0/0:11,0:11:27.05:0,27,448	0/0:25,0:25:69.21:0,69,1219	0/0:37,0:37:99:0,102,1885	0/0:28,0:28:84.25:0,84,1504	1/1:1,27:29:78.18:1911,78,0	1/1:4,28:33:75.68:1878,76,0	1/1:1,19:21:51.18:1358,51,0	0/0:27,0:27:72.25:0,72,1329	0/0:35,0:35:99:0,102,1842	0/0:47,0:46:99:0,123,2150	0/0:17,0:17:51.14:0,51,870
chr10	8446687	.	T	TA	3732.33	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-13.464;DP=593;FS=0.000;HRun=8;HaplotypeScore=73.7911;InbreedingCoeff=0.9566;MQ=73.50;MQ0=0;MQRankSum=-1.786;QD=29.62;ReadPosRankSum=2.206;VQSLOD=3.4716;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,114,1038	0/0:14,0:14:41.99:0,42,374	0/0:12,0:12:14.82:0,15,124	0/0:7,0:7:9:0,9,82	0/0:26,0:26:78.04:0,78,713	0/0:29,1:30:43.41:0,43,651	0/0:12,0:12:30.01:0,30,274	0/0:38,0:37:99:0,108,982	0/0:20,0:20:45.01:0,45,412	1/1:4,21:25:60.18:692,60,0	1/1:2,20:22:60.18:692,60,0	0/0:15,1:16:4.39:0,4,290	0/0:24,0:24:48.01:0,48,439	0/0:19,0:19:54.03:0,54,494	1/1:0,22:22:63.19:727,63,0	0/0:13,0:13:36.01:0,36,325	0/0:31,0:31:80.98:0,81,728	0/0:8,0:9:23.04:0,23,198	0/0:22,0:23:65.06:0,65,577	0/0:31,0:31:78.04:0,78,714	0/0:10,0:10:27.01:0,27,247	1/1:3,18:22:57.16:651,57,0	1/1:2,20:22:51.15:589,51,0	1/1:1,12:13:33.10:381,33,0	0/0:20,0:20:54.03:0,54,494	0/0:27,0:27:72.03:0,72,659	0/0:32,0:31:87.04:0,87,796	0/0:13,0:13:39.02:0,39,357
chr10	8446708	.	AT	A	5170.23	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=5.390;DP=580;FS=2.392;HRun=8;HaplotypeScore=69.0672;InbreedingCoeff=0.9703;MQ=67.89;MQ0=0;MQRankSum=2.055;QD=24.39;ReadPosRankSum=0.207;VQSLOD=5.5707;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,123,1471	0/0:14,0:14:33.09:0,33,387	0/0:11,0:10:14.31:0,14,110	0/0:3,0:2:1.74:0,2,6	0/0:33,0:33:87.25:0,87,1039	0/0:28,0:28:83.99:0,84,991	0/0:17,0:17:48.14:0,48,569	1/1:7,21:28:63.07:598,63,0	0/0:17,0:17:39.12:0,39,471	0/0:31,0:31:90.27:0,90,1077	0/0:21,0:21:57.17:0,57,689	1/1:0,13:13:39.06:377,39,0	1/1:2,19:21:48.08:464,48,0	1/1:1,18:19:51.08:493,51,0	0/0:23,0:23:63.18:0,63,750	0/0:14,0:14:36.11:0,36,435	0/0:30,0:30:75.22:0,75,894	0/0:9,0:9:27.06:0,27,306	1/1:4,17:21:48.05:458,48,0	1/1:1,33:34:86.98:818,87,0	1/1:0,10:10:27.04:261,27,0	0/0:20,0:20:60.17:0,60,713	0/0:21,0:21:51.16:0,51,616	0/0:12,0:12:30.08:0,30,352	0/0:20,0:20:54.17:0,54,652	1/1:0,22:22:66.09:631,66,0	1/1:4,27:31:78.12:753,78,0	1/1:2,11:13:33.05:319,33,0
chr10	8448957	.	GCACACACA	G	4852.85	PASS	AB=0.787;AC=19;AF=0.352;AN=54;BaseQRankSum=3.793;DP=737;FS=29.499;HRun=0;HaplotypeScore=205.0880;InbreedingCoeff=0.7179;MQ=65.65;MQ0=17;MQRankSum=-9.446;QD=18.52;ReadPosRankSum=1.572;VQSLOD=2.3276;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:27:29.77:0,30,948	0/0:5,0:6:15.05:0,15,532	0/0:50,0:29:8.99:0,9,117	0/0:60,0:29:6.01:0,6,91	0/0:10,0:17:11.98:0,12,98	0/0:33,0:38:78.17:0,78,2348	0/1:21,0:22:28.77:29,0,874	1/1:16,13:29:15.42:371,15,0	1/1:9,13:23:21.07:508,21,0	0/0:20,0:23:47.93:0,48,971	0/0:13,0:29:33.02:0,33,719	1/1:8,12:23:25.80:711,26,0	1/1:3,12:17:32.60:689,33,0	1/1:3,13:20:29.79:652,30,0	0/0:14,0:27:29.20:0,29,759	0/0:15,0:31:47.43:0,47,973	0/0:26,0:27:48.15:0,48,1730	0/0:11,0:16:17.27:0,17,351	1/1:8,4:10:12.01:224,12,0	1/1:7,10:19:17.80:391,18,0	0/1:21,14:35:55.19:64,0,55	0/0:16,0:31:26.23:0,26,745	0/0:13,0:26:30.56:0,31,617	0/0:22,0:38:57.11:0,57,984	0/0:18,0:23:48.15:0,48,1670	0/1:16,12:28:13.83:520,0,14	1/1:12,18:33:29.92:694,30,0	./.
chr10	8449397	.	TA	T	8672.16	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=13.435;DP=651;FS=4.456;HRun=8;HaplotypeScore=64.4939;InbreedingCoeff=0.9995;MQ=76.22;MQ0=0;MQRankSum=0.097;QD=25.81;ReadPosRankSum=5.321;VQSLOD=5.4027;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:1,13:14:39.06:376,39,0	1/1:1,13:14:39.06:377,39,0	0/0:20,0:20:47.75:0,48,479	0/0:13,0:13:24.06:0,24,269	1/1:3,30:33:87.10:831,87,0	1/1:0,28:28:74.94:713,75,0	1/1:1,11:12:30.05:290,30,0	0/0:42,0:42:96.28:0,96,1141	0/0:24,0:24:63.17:0,63,747	1/1:1,33:34:99:941,99,0	1/1:2,30:32:84.12:810,84,0	0/0:17,0:17:51.16:0,51,616	0/0:24,0:24:69.18:0,69,802	0/0:23,0:23:66.20:0,66,797	1/1:0,23:23:66.11:637,66,0	1/1:1,23:24:69.11:666,69,0	1/1:2,22:24:57.09:550,57,0	1/1:0,16:16:48.08:463,48,0	0/0:17,0:17:51.05:0,51,595	0/0:36,1:37:79.30:0,79,1191	0/0:14,0:14:39.12:0,39,471	1/1:3,16:19:48.02:454,48,0	1/1:0,28:28:81.13:782,81,0	1/1:0,11:11:30.05:290,30,0	1/1:4,20:24:51.08:492,51,0	0/0:34,0:34:96.28:0,96,1148	0/0:39,0:39:81.01:0,81,1148	0/0:11,0:11:33.10:0,33,399
chr10	8450586	.	A	AAGACGTGTAGATTGATAGAACTGGG	46391.24	PASS	AB=0.711;AC=54;AF=0.964;AN=56;BaseQRankSum=-2.994;DP=330;FS=13.647;HRun=0;HaplotypeScore=352.4643;InbreedingCoeff=-0.0495;MQ=53.03;MQ0=0;MQRankSum=-1.956;QD=140.58;ReadPosRankSum=1.729;VQSLOD=3.2754;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:11:12.04:1046,12,0	1/1:2,0:2:5.93:200,6,0	0/1:3,0:7:13.85:950,0,14	0/1:8,1:11:35.46:1119,0,35	1/1:14,0:14:29.88:2038,30,0	1/1:19,0:19:37.72:2675,38,0	1/1:12,0:12:33.05:2332,33,0	1/1:14,0:14:36.11:2205,36,0	1/1:9,0:9:23.11:1382,23,0	1/1:16,0:16:32.87:2678,33,0	1/1:15,0:15:34.73:902,35,0	1/1:15,0:15:29.42:1857,29,0	1/1:20,0:20:51.66:1986,52,0	1/1:11,0:11:25.27:1783,25,0	1/1:18,0:18:43.01:2395,43,0	1/1:18,0:18:34.68:2282,35,0	1/1:4,0:4:9.03:729,9,0	1/1:5,0:5:15.01:1094,15,0	1/1:8,0:8:24.07:1116,24,0	1/1:13,0:13:26.12:2205,26,0	1/1:12,0:12:27.09:996,27,0	1/1:15,0:15:43.46:2888,43,0	1/1:12,0:12:26.45:2108,26,0	1/1:7,0:7:16.30:1013,16,0	1/1:10,0:10:26.99:1240,27,0	1/1:19,0:19:38.21:3055,38,0	1/1:11,0:11:24.19:1926,24,0	1/1:2,0:2:5.38:191,5,0
chr10	8451386	.	A	AG	3382.17	PASS	AB=0.921;AC=45;AF=0.804;AN=56;BaseQRankSum=3.721;DP=456;FS=102.522;HRun=0;HaplotypeScore=101.7820;InbreedingCoeff=0.0093;MQ=40.53;MQ0=41;MQRankSum=-0.113;QD=8.07;ReadPosRankSum=3.699;VQSLOD=0.0503;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:29:53.43:329,53,0	1/1:3,0:3:8.18:37,8,0	0/0:37,0:6:0.82:0,1,24	0/1:22,0:3:0.67:1,0,33	1/1:18,0:17:24.69:133,25,0	0/1:7,0:7:11.30:11,0,14	1/1:16,0:15:21.90:155,22,0	1/1:19,3:23:38.38:362,38,0	1/1:13,0:13:10.29:91,10,0	1/1:20,0:17:8.03:149,8,0	0/1:9,2:10:0.73:65,0,1	1/1:14,1:15:4.43:32,4,0	1/1:14,6:20:41.14:285,41,0	1/1:6,9:15:11.56:140,12,0	0/1:12,0:10:34.40:34,0,43	1/1:14,0:13:19.37:98,19,0	0/1:20,0:20:2.67:126,0,3	0/1:14,0:14:1.78:44,0,2	1/1:17,2:16:33.70:210,34,0	1/1:6,13:18:17.43:145,17,0	0/1:2,2:4:10.27:11,0,10	1/1:16,1:17:0.69:72,1,0	1/1:9,0:6:12.99:68,13,0	0/1:9,0:9:34.02:34,0,40	1/1:11,0:11:7.98:70,8,0	1/1:5,19:24:54.27:409,54,0	1/1:5,12:18:15.27:176,15,0	0/1:10,4:7:10.36:99,0,10
chr10	8451389	.	A	AC	2957.53	PASS	AB=1.000;AC=43;AF=0.768;AN=56;BaseQRankSum=1.820;DP=477;FS=117.410;HRun=0;HaplotypeScore=107.5033;InbreedingCoeff=0.1603;MQ=42.07;MQ0=40;MQRankSum=-0.622;QD=7.27;ReadPosRankSum=6.212;VQSLOD=0.4306;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:32,0:30:54.54:294,55,0	1/1:3,0:3:8.01:34,8,0	0/0:39,0:7:9.52:0,10,62	0/0:25,0:4:6.23:0,6,50	1/1:18,0:17:22.70:100,23,0	0/0:6,0:6:1.05:0,1,9	1/1:17,0:16:29.71:137,30,0	1/1:26,0:25:27.77:287,28,0	1/1:13,0:13:15.07:88,15,0	1/1:20,0:17:10.85:105,11,0	0/1:12,0:11:17.22:58,0,17	1/1:3,10:16:0.33:36,0,0	1/1:20,1:21:35.06:272,35,0	1/1:15,0:15:22.62:164,23,0	0/1:12,0:10:27.57:31,0,28	1/1:15,0:14:18.72:88,19,0	1/1:22,0:22:27.79:153,28,0	0/1:15,0:15:10.47:31,0,10	1/1:20,0:17:27.36:184,27,0	1/1:20,0:19:12.27:143,12,0	0/1:4,0:4:11.25:23,0,11	1/1:19,0:19:0.94:55,1,0	0/1:12,0:9:2.14:38,0,2	0/1:9,0:9:25.31:25,0,39	1/1:11,0:11:15.51:69,16,0	1/1:23,1:24:49.27:389,49,0	1/1:18,0:18:28.97:196,29,0	0/1:13,0:7:7.22:108,0,7
chr10	8451403	.	AAG	A	5091.85	PASS	AB=1.000;AC=54;AF=0.964;AN=56;BaseQRankSum=0.328;DP=518;FS=14.003;HRun=0;HaplotypeScore=109.4168;InbreedingCoeff=-0.0629;MQ=52.50;MQ0=24;MQRankSum=-0.996;QD=9.83;ReadPosRankSum=-0.389;VQSLOD=3.4106;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,32:36:42.08:445,42,0	1/1:0,3:3:6.02:66,6,0	0/1:38,0:12:66.67:76,0,67	0/1:26,0:7:29.09:46,0,29	1/1:11,10:21:60.85:486,61,0	1/1:0,8:8:11.89:80,12,0	1/1:6,15:20:25.59:254,26,0	1/1:25,2:26:65.13:435,65,0	1/1:17,0:17:14.73:107,15,0	1/1:26,0:23:44.68:307,45,0	1/1:13,0:12:7.40:86,7,0	1/1:17,0:17:15.26:90,15,0	1/1:18,0:18:30.10:144,30,0	1/1:15,2:17:27.19:171,27,0	1/1:14,0:12:27.01:164,27,0	1/1:3,13:15:14.99:151,15,0	1/1:4,24:28:36.39:343,36,0	1/1:0,18:18:12.03:132,12,0	1/1:16,1:15:32.50:179,33,0	1/1:20,1:20:30.94:171,31,0	1/1:3,0:3:8.90:59,9,0	1/1:19,0:19:12.42:108,12,0	1/1:12,0:9:20.74:132,21,0	1/1:11,0:11:0.04:62,0,0	1/1:3,13:16:12.46:119,12,0	1/1:24,1:25:54.86:335,55,0	1/1:18,2:20:35.07:228,35,0	1/1:9,0:8:19.60:116,20,0
chr10	8451404	.	AG	A	5523.69	PASS	AB=0.923;AC=54;AF=0.964;AN=56;BaseQRankSum=-1.133;DP=512;FS=1.589;HRun=1;HaplotypeScore=99.8253;InbreedingCoeff=-0.0474;MQ=53.09;MQ0=23;MQRankSum=-0.338;QD=10.79;ReadPosRankSum=0.840;VQSLOD=2.9762;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:34,1:34:41.66:304,42,0	1/1:3,0:3:5.95:42,6,0	0/1:33,5:12:67.81:75,0,68	0/1:25,1:7:23.26:61,0,23	1/1:20,1:21:60.70:415,61,0	1/1:8,0:8:11.89:81,12,0	1/1:16,2:17:23.87:190,24,0	1/1:29,0:28:76.09:491,76,0	1/1:0,16:16:14.96:139,15,0	1/1:25,0:23:54.64:379,55,0	1/1:12,1:12:23.60:128,24,0	1/1:18,0:18:20.47:127,20,0	1/1:18,0:18:42.67:234,43,0	1/1:17,0:17:32.43:206,32,0	1/1:14,1:13:36.91:247,37,0	1/1:13,1:14:14.86:102,15,0	1/1:25,2:27:35.80:277,36,0	1/1:18,0:18:11.85:84,12,0	1/1:17,0:15:40.06:231,40,0	1/1:21,0:20:37.04:220,37,0	1/1:4,0:4:11.85:78,12,0	1/1:19,0:19:35.75:194,36,0	1/1:13,0:10:24.73:176,25,0	1/1:11,0:11:22.63:128,23,0	1/1:14,0:14:12.37:83,12,0	1/1:25,0:25:64.04:414,64,0	1/1:19,1:20:43.45:281,43,0	1/1:9,0:8:20.45:138,20,0
chr10	8451639	.	C	CGTGT	11488.52	PASS	AB=0.777;AC=34;AF=0.607;AN=56;BaseQRankSum=-3.279;DP=690;FS=7.106;HRun=0;HaplotypeScore=121.8189;InbreedingCoeff=0.6849;MQ=58.36;MQ0=7;MQRankSum=2.521;QD=23.54;ReadPosRankSum=0.481;VQSLOD=3.9829;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:12,22:39:28.05:1077,0,28	1/1:1,7:12:17.49:243,17,0	0/1:42,0:21:4.99:5,0,146	0/0:32,0:19:14.23:0,14,229	1/1:7,13:25:44.62:971,45,0	0/1:6,16:30:38.74:1053,0,39	1/1:13,11:29:36.76:705,37,0	0/0:26,0:28:42.07:0,42,577	1/1:6,0:24:46.84:219,47,0	1/1:3,17:27:62.86:1162,63,0	1/1:9,11:23:29.84:662,30,0	0/0:21,0:21:54.18:0,54,866	0/0:25,0:25:60.12:0,60,927	0/0:24,0:24:48.15:0,48,747	1/1:6,10:18:20.81:451,21,0	1/1:4,12:16:24.08:583,24,0	1/1:8,15:27:44.41:925,44,0	1/1:14,4:19:32.79:552,33,0	0/0:15,0:16:3.34:0,3,182	0/0:20,0:22:42.61:0,43,634	1/1:10,0:40:27.67:280,28,0	1/1:4,8:14:14.52:243,15,0	1/1:4,12:19:23.30:460,23,0	1/1:9,20:33:50.91:1161,51,0	1/1:7,13:24:32.85:722,33,0	0/1:23,1:25:16.18:16,0,748	0/0:21,0:22:38.48:0,38,738	0/0:12,0:12:13.33:0,13,243
chr10	8453005	.	CGAAAGAAA	C	2220.66	PASS	AB=0.842;AC=13;AF=0.260;AN=50;BaseQRankSum=0.638;DP=560;FS=9.308;HRun=0;HaplotypeScore=151.4042;InbreedingCoeff=0.7245;MQ=72.72;MQ0=3;MQRankSum=-6.063;QD=14.80;ReadPosRankSum=1.423;VQSLOD=1.9780;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:10.28:0,10,322	0/0:9,0:9:9.03:0,9,293	./.	./.	0/0:34,0:33:27.08:0,27,835	0/0:21,0:21:18.06:0,18,643	0/0:16,0:16:18.06:0,18,434	0/0:28,0:27:0.89:0,1,2	0/0:12,0:21:18.05:0,18,574	0/0:25,0:24:30.10:0,30,1005	0/0:22,0:21:27.09:0,27,843	1/1:14,9:23:12.04:291,12,0	1/1:22,9:31:15.05:367,15,0	1/1:11,5:16:15.05:330,15,0	0/0:25,0:25:21.06:0,21,690	0/0:19,0:19:12.04:0,12,425	0/0:21,0:21:13.55:0,14,328	0/0:11,0:11:3.34:0,3,156	1/1:18,2:20:6.02:107,6,0	1/1:15,4:19:7.75:218,8,0	0/0:12,0:12:1.25:0,1,3	0/0:22,0:22:30.10:0,30,957	0/0:24,0:24:19.61:0,20,550	0/0:19,0:19:11.97:0,12,254	0/0:24,0:24:18.06:0,18,596	0/1:13,3:16:88.80:231,0,89	1/1:14,9:25:36.12:843,36,0	./.
chr10	8453064	.	A	AGAAAGAC	1825.01	PASS	AB=0.760;AC=20;AF=0.357;AN=56;BaseQRankSum=-2.701;DP=682;FS=2.354;HRun=0;HaplotypeScore=171.0197;InbreedingCoeff=-0.4052;MQ=65.81;MQ0=6;MQRankSum=1.139;QD=3.57;ReadPosRankSum=-7.371;VQSLOD=0.5422;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:15,0:15:61.19:61,0,151	0/1:12,0:12:63.43:63,0,110	0/0:14,0:12:28.09:0,28,452	0/0:9,0:9:13.57:0,14,358	0/1:3,0:25:99:250,0,261	0/1:1,0:21:31.42:120,0,31	0/1:28,0:27:46.79:47,0,259	0/1:50,0:50:99:127,0,437	0/0:24,0:23:46.10:0,46,776	0/1:1,0:33:99:260,0,289	0/1:2,0:27:79.28:79,0,427	0/1:21,0:21:53.42:53,0,224	0/1:33,0:33:67.70:68,0,450	0/0:20,0:20:29.94:0,30,345	0/1:22,0:22:94.82:95,0,332	0/1:1,1:26:2.62:214,0,3	0/1:5,1:37:39.59:40,0,127	0/0:1,0:9:3.01:0,3,30	0/0:23,0:23:64.02:0,64,397	0/0:21,0:21:12.96:0,13,353	0/1:16,0:16:78.82:79,0,102	0/1:1,0:31:99:153,0,306	0/1:2,0:29:74.77:75,0,128	1/1:1,0:24:6.01:62,6,0	0/1:5,0:33:44.03:44,0,94	0/1:24,0:24:97.20:97,0,283	0/0:36,0:36:80.09:0,80,878	0/0:14,0:13:14.86:0,15,182
chr10	8453237	.	TACACAC	T	10392.34	PASS	AB=0.561;AC=29;AF=0.518;AN=56;BaseQRankSum=12.791;DP=774;FS=1.587;HRun=0;HaplotypeScore=163.8996;InbreedingCoeff=0.9332;MQ=55.24;MQ0=19;MQRankSum=-12.644;QD=30.84;ReadPosRankSum=3.270;VQSLOD=4.8177;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:15,6:22:28.04:541,28,0	1/1:1,6:7:9.03:194,9,0	0/0:66,0:23:34.89:0,35,607	0/0:55,0:25:35.99:0,36,610	1/1:4,29:33:66.23:1331,66,0	1/1:10,24:33:48.16:1012,48,0	1/1:6,14:20:30.10:644,30,0	0/0:37,0:39:86.16:0,86,1989	0/0:20,0:26:31.14:0,31,576	1/1:11,19:29:53.70:967,54,0	1/1:7,20:27:51.17:1054,51,0	0/0:14,0:17:42.13:0,42,1204	0/0:38,0:38:81.26:0,81,2472	0/0:35,0:36:81.24:0,81,2240	1/1:8,24:32:51.09:1004,51,0	0/1:5,17:23:2.78:673,0,3	1/1:4,11:16:20.99:401,21,0	1/1:5,7:12:11.95:258,12,0	0/0:26,0:23:44.84:0,45,758	0/0:31,0:32:78.27:0,78,2312	0/0:28,0:28:69.71:0,70,2148	1/1:0,17:18:42.14:846,42,0	1/1:6,13:20:33.11:654,33,0	1/1:8,16:24:14.72:321,15,0	1/1:3,14:18:24.08:493,24,0	0/0:31,0:31:84.14:0,84,2489	0/0:32,0:33:90.22:0,90,2777	0/0:7,0:7:12.04:0,12,339
chr10	8453239	.	C	CAAAACACACACACAT	1315.81	PASS	AB=1.000;AC=6;AF=0.107;AN=56;BaseQRankSum=3.428;DP=772;FS=9.035;HRun=0;HaplotypeScore=318.3740;InbreedingCoeff=0.2099;MQ=55.10;MQ0=18;MQRankSum=-5.875;QD=10.87;ReadPosRankSum=-2.826;VQSLOD=0.7781;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:13.98:0,14,686	0/0:7,0:7:12.04:0,12,350	0/0:67,0:23:28.08:0,28,866	0/0:56,0:25:54.16:0,54,832	0/1:32,0:32:11.74:12,0,899	0/0:33,0:32:48.03:0,48,1087	0/1:20,0:20:3.45:3,0,421	0/0:41,0:41:83.05:0,83,1933	1/1:12,12:29:29.72:1402,30,0	0/0:29,0:28:57.30:0,57,1191	0/0:27,0:27:40.61:0,41,1031	0/0:18,0:18:48.14:0,48,1436	0/0:37,0:37:99:0,105,2927	0/0:35,0:35:99:0,102,3029	0/0:32,0:31:45.98:0,46,1215	0/0:22,0:22:2.85:0,3,722	0/0:16,0:16:10.98:0,11,379	0/0:11,0:11:22.58:0,23,372	0/0:25,0:22:0.10:0,0,594	0/0:32,0:32:93.26:0,93,2621	0/0:28,0:28:77.67:0,78,2366	0/1:18,0:18:5.11:5,0,652	0/1:20,0:20:6.44:6,0,667	0/0:24,0:24:2.60:0,3,533	0/0:17,0:17:27.19:0,27,720	0/0:31,0:31:22.09:0,22,2356	0/0:33,0:33:93.32:0,93,2691	0/0:7,0:7:18.79:0,19,494
chr10	8453736	.	TAGAGAGAGAGAGAGAG	T	4197.46	PASS	AB=0.800;AC=17;AF=0.304;AN=56;BaseQRankSum=6.638;DP=483;FS=31.287;HRun=0;HaplotypeScore=203.8356;InbreedingCoeff=0.7974;MQ=75.30;MQ0=6;MQRankSum=-7.649;QD=32.04;ReadPosRankSum=0.903;VQSLOD=0.9426;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:20,2:22:5.50:305,5,0	1/1:5,2:7:6.02:263,6,0	0/0:27,0:18:3.01:0,3,42	0/0:40,0:21:6.94:0,7,79	1/1:11,6:19:18.06:741,18,0	1/1:15,6:20:21.05:782,21,0	1/1:12,3:16:15.05:542,15,0	0/0:23,0:23:21.07:0,21,858	0/0:11,0:13:18.06:0,18,1082	0/0:18,0:24:48.16:0,48,2555	0/0:12,0:13:17.09:0,17,843	0/0:11,0:11:9.03:0,9,436	0/0:12,0:17:21.07:0,21,920	0/0:12,0:15:18.06:0,18,851	0/0:11,0:18:33.11:0,33,1803	1/1:12,3:15:12.03:424,12,0	1/1:7,3:10:9.03:389,9,0	0/1:6,1:7:13.84:106,0,14	0/0:17,0:19:23.67:0,24,1084	0/0:18,0:19:33.11:0,33,1492	0/0:12,0:11:18.05:0,18,827	0/0:17,0:17:21.06:0,21,830	0/0:10,0:10:12.04:0,12,840	0/0:23,0:25:27.33:0,27,1630	1/1:8,5:13:15.05:646,15,0	0/0:12,0:17:42.14:0,42,1681	0/0:18,0:21:45.63:0,46,2116	0/0:8,0:8:21.07:0,21,1133
chr10	8453808	.	A	ATT	4993.02	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-5.229;DP=478;FS=6.756;HRun=9;HaplotypeScore=84.7325;InbreedingCoeff=0.9849;MQ=78.58;MQ0=0;MQRankSum=-3.005;QD=32.63;ReadPosRankSum=-1.861;VQSLOD=4.4367;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,18:21:51.13:751,51,0	1/1:0,10:10:21.06:323,21,0	0/0:24,0:23:23.46:0,23,435	0/0:10,0:10:8.98:0,9,95	1/1:7,16:24:53.54:692,54,0	1/1:2,18:21:51.17:767,51,0	1/1:6,9:15:27.09:416,27,0	0/0:29,0:29:75.12:0,75,791	0/0:3,0:17:32.92:0,33,144	0/0:23,0:23:60.13:0,60,639	0/0:18,0:18:45.06:0,45,471	0/0:17,0:17:51.11:0,51,534	0/0:15,0:15:42.09:0,42,447	0/0:19,0:19:51.11:0,51,535	0/0:19,0:19:48.10:0,48,511	1/1:1,17:18:51.17:777,51,0	1/1:2,7:9:18.06:277,18,0	1/1:2,9:13:27.05:389,27,0	0/0:16,0:16:36.06:0,36,383	0/0:25,0:25:63.11:0,63,662	0/0:12,0:13:30.03:0,30,375	0/0:6,0:6:15.02:0,15,160	0/0:10,0:10:30.06:0,30,311	0/0:17,0:17:48.12:0,48,511	1/1:5,15:21:39.13:600,39,0	0/0:19,0:19:42.07:0,42,447	0/0:20,0:20:51.04:0,51,515	0/0:8,0:8:21.05:0,21,224
chr10	8455732	.	AACACACAC	A	1377.43	PASS	AB=0.927;AC=20;AF=0.385;AN=52;BaseQRankSum=2.861;DP=508;FS=12.080;HRun=0;HaplotypeScore=147.8528;InbreedingCoeff=0.5106;MQ=61.21;MQ0=8;MQRankSum=-5.942;QD=6.12;ReadPosRankSum=-0.717;VQSLOD=1.4070;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:36,5:42:16.03:203,16,0	1/1:6,1:8:6.02:130,6,0	./.	./.	1/1:12,5:17:5.97:94,6,0	1/1:18,0:18:3:74,3,0	1/1:11,5:16:5.69:148,6,0	0/0:23,0:23:8.93:0,9,63	0/1:16,0:21:12.31:36,0,12	0/0:22,0:23:21.07:0,21,658	0/0:17,0:17:15.05:0,15,575	0/0:13,0:13:8.95:0,9,117	0/1:14,0:14:13.97:14,0,65	0/0:16,0:16:8.58:0,9,59	0/0:13,0:15:18.06:0,18,525	1/1:9,6:15:6.02:148,6,0	1/1:15,9:24:15.05:370,15,0	0/1:11,0:12:46.85:47,0,69	0/1:20,0:20:14.44:14,0,60	0/0:13,0:12:11.94:0,12,129	0/0:18,0:18:29.22:0,29,563	0/0:17,0:17:24.08:0,24,714	0/0:17,0:16:9.03:0,9,286	0/0:27,0:28:30.09:0,30,977	1/1:8,7:16:12.04:278,12,0	0/0:19,0:18:30.96:0,31,491	0/0:15,0:15:6.02:0,6,129	0/0:5,0:4:11.93:0,12,197
chr10	8455735	.	ACAC	A	75.99	PASS	AB=0.884;AC=5;AF=0.089;AN=56;BaseQRankSum=9.454;DP=520;FS=3.882;HRun=0;HaplotypeScore=110.1449;InbreedingCoeff=-0.1297;MQ=57.43;MQ0=10;MQRankSum=-7.273;QD=0.97;ReadPosRankSum=-3.045;VQSLOD=1.5647;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:42:40.07:0,40,871	0/0:9,0:9:2.46:0,2,188	0/0:17,0:13:36.12:0,36,457	0/0:23,0:14:36.59:0,37,458	0/0:17,0:17:25.13:0,25,394	0/0:15,0:15:19.10:0,19,436	0/0:16,0:16:14.69:0,15,359	0/0:26,0:26:64.73:0,65,304	0/0:20,0:19:7.06:0,7,384	0/0:23,0:22:61.43:0,61,825	0/0:19,0:19:32.01:0,32,587	0/1:16,1:16:68.48:68,0,79	0/1:14,2:17:81.54:82,0,106	0/0:14,1:15:8.63:0,9,187	0/0:17,0:17:44.93:0,45,605	0/0:15,0:15:2.65:0,3,194	0/1:23,0:23:14.33:14,0,268	0/0:13,0:13:23.21:0,23,373	0/0:18,1:19:7.59:0,8,173	0/0:11,1:11:1.80:0,2,103	0/0:20,0:20:26:0,26,244	0/0:17,0:17:48.16:0,48,748	0/0:16,0:15:26.93:0,27,408	0/0:30,0:30:64.99:0,65,1090	0/1:16,0:16:9.89:10,0,235	0/0:19,0:20:28.08:0,28,330	0/0:17,0:18:35.12:0,35,207	0/1:2,1:4:13.19:13,0,60
chr10	8456556	.	C	CAT	1707.24	PASS	AC=30;AF=0.600;AN=50;BaseQRankSum=0.459;DP=194;FS=19.123;HRun=0;HaplotypeScore=43.3216;InbreedingCoeff=0.6564;MQ=83.77;MQ0=0;MQRankSum=-2.591;QD=16.11;ReadPosRankSum=-0.754;VQSLOD=1.5634;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,7:12:9.03:151,9,0	1/1:1,1:2:3.01:50,3,0	0/0:11,0:11:5.75:0,6,50	0/0:11,0:10:4.27:0,4,64	1/1:3,7:10:9.03:151,9,0	1/1:2,7:9:18.06:301,18,0	1/1:1,2:3:3.01:50,3,0	1/1:8,1:20:32.91:305,33,0	0/0:6,0:6:18.06:0,18,229	0/0:12,0:12:24.07:0,24,296	0/0:13,0:13:18.04:0,18,216	1/1:2,0:6:6.01:63,6,0	./.	1/1:1,0:4:6:53,6,0	0/0:7,0:7:12.03:0,12,139	1/1:2,0:2:3.01:47,3,0	1/1:1,3:4:3.01:50,3,0	1/1:0,2:2:3.01:50,3,0	1/1:6,0:8:9:78,9,0	./.	./.	0/0:3,0:3:5.05:0,5,44	0/0:8,0:8:14.51:0,15,189	0/0:3,0:3:3.01:0,3,38	1/1:1,7:8:18.06:301,18,0	1/1:2,0:9:20.94:176,21,0	1/1:2,0:6:6:53,6,0	0/0:6,0:6:0.47:0,0,1
chr10	8456566	.	TAC	T	80.64	PASS	AB=1.000;AC=4;AF=0.077;AN=52;BaseQRankSum=-2.461;DP=165;FS=1.414;HRun=0;HaplotypeScore=45.4859;InbreedingCoeff=0.0973;MQ=91.45;MQ0=0;MQRankSum=-2.361;QD=2.69;ReadPosRankSum=-2.341;VQSLOD=0.7484;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:8:8.99:0,9,80	0/0:1,0:1:3.01:0,3,31	0/0:12,0:11:18.82:0,19,178	0/0:16,0:14:15.33:0,15,147	0/0:7,0:7:9:0,9,85	0/0:7,0:7:18:0,18,168	0/0:3,0:3:3.01:0,3,31	0/1:19,0:19:99:126,0,318	0/0:6,0:6:18.06:0,18,337	0/0:10,0:10:27.08:0,27,461	0/0:7,0:7:21.04:0,21,338	0/0:3,0:3:5.62:0,6,27	0/0:2,2:4:5.99:0,6,48	0/0:2,0:2:5.54:0,6,26	0/0:6,0:6:12.03:0,12,198	0/0:1,0:1:0.89:0,1,2	0/0:3,0:3:3:0,3,28	0/0:2,0:2:3.01:0,3,31	0/0:6,0:6:11:0,11,75	./.	./.	0/0:4,0:4:3.01:0,3,57	0/0:10,0:10:18.50:0,18,280	0/0:2,0:2:3.01:0,3,56	0/0:7,0:7:18.04:0,18,184	0/1:8,0:8:33.35:33,0,34	0/0:5,0:5:5.49:0,5,24	1/1:0,3:3:2.96:19,3,0
chr10	8457861	.	GAA	G	8536.79	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=19.936;DP=763;FS=2.448;HRun=6;HaplotypeScore=104.3057;InbreedingCoeff=0.9946;MQ=83.23;MQ0=2;MQRankSum=-6.992;QD=34.42;ReadPosRankSum=3.107;VQSLOD=4.4225;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,45:46:99:1761,132,0	1/1:1,6:7:21.07:273,21,0	0/0:25,0:25:75.21:0,75,1259	0/0:25,0:25:59.77:0,60,1015	1/1:1,25:26:69.23:920,69,0	1/1:0,18:18:45.15:599,45,0	1/1:2,32:34:90.29:1201,90,0	0/0:37,0:37:99:0,102,1829	0/0:22,0:22:66.23:0,66,1176	0/0:22,0:22:66.22:0,66,1156	0/0:23,0:23:66.22:0,66,1155	0/0:24,0:24:66.23:0,66,1186	0/0:25,0:25:69.24:0,69,1226	0/0:27,0:27:81.28:0,81,1459	0/0:35,0:35:99:0,105,1864	1/1:1,38:39:54.31:1347,54,0	1/1:2,26:28:66.22:880,66,0	1/1:2,22:23:60.19:796,60,0	0/0:22,0:22:63.20:0,63,1088	0/0:29,0:29:87.30:0,87,1567	0/0:29,0:29:87.27:0,87,1508	0/0:31,0:31:90.30:0,90,1593	0/0:25,0:25:72.25:0,72,1274	0/0:36,0:36:99:0,99,1783	1/1:2,24:25:57.19:760,57,0	0/0:27,0:27:81.28:0,81,1458	0/0:45,0:45:99:0,135,2391	0/0:6,0:6:12.04:0,12,216
chr10	8458686	.	GA	G	4201.93	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=11.277;DP=485;FS=3.308;HRun=10;HaplotypeScore=48.6132;InbreedingCoeff=0.9640;MQ=74.11;MQ0=1;MQRankSum=-2.008;QD=21.01;ReadPosRankSum=0.063;VQSLOD=4.4521;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,2:27:20.08:0,20,678	0/0:9,0:9:21.06:0,21,232	0/0:14,0:12:23.95:0,24,220	0/0:15,0:13:15.04:0,15,166	0/0:18,1:19:16.05:0,16,398	0/0:11,0:11:27.04:0,27,273	0/0:7,0:7:18.05:0,18,199	1/1:3,29:32:79.65:680,80,0	0/0:18,0:18:51.13:0,51,556	0/0:15,0:15:36.10:0,36,398	0/0:10,0:11:23.90:0,24,246	1/1:2,13:15:35.99:312,36,0	1/1:2,15:17:41.99:364,42,0	1/1:1,12:13:29.99:260,30,0	0/0:21,1:22:28.09:0,28,538	0/0:16,0:16:39.11:0,39,431	0/0:26,0:26:68.56:0,69,774	0/0:14,0:14:39.99:0,40,433	1/1:4,17:21:50.93:436,51,0	1/1:4,13:17:38.98:339,39,0	1/1:2,21:23:56.99:495,57,0	0/0:9,0:9:21.06:0,21,232	0/0:9,0:9:21.04:0,21,224	0/0:26,0:26:78.20:0,78,854	0/0:16,0:16:45.08:0,45,484	1/1:3,22:25:68.95:593,69,0	1/1:4,21:25:53.98:469,54,0	1/1:1,11:12:2.81:253,3,0
chr10	8459005	.	T	TGA	2626.66	PASS	AB=0.860;AC=37;AF=0.685;AN=54;BaseQRankSum=-2.063;DP=574;FS=5.199;HRun=0;HaplotypeScore=89.2605;InbreedingCoeff=0.3008;MQ=66.00;MQ0=9;MQRankSum=0.122;QD=5.40;ReadPosRankSum=-1.194;VQSLOD=1.8377;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:23,7:31:5.99:75,6,0	1/1:10,2:12:3.01:45,3,0	./.	0/1:26,0:16:0:0,0,0	0/1:26,4:29:73.80:74,0,82	1/1:9,1:22:18.01:168,18,0	1/1:11,1:21:12.01:115,12,0	1/1:36,0:34:13.20:109,13,0	0/0:14,0:14:15.02:0,15,153	1/1:17,1:23:21.50:252,21,0	1/1:18,0:25:3:29,3,0	1/1:13,5:18:12.04:169,12,0	1/1:13,5:18:15.05:208,15,0	0/1:20,0:20:14.67:15,0,21	1/1:8,6:15:6.02:89,6,0	1/1:7,10:18:6.91:253,7,0	1/1:15,2:28:28.84:293,29,0	0/1:8,7:15:43.66:198,0,44	0/1:14,2:16:51.55:79,0,52	0/1:23,5:29:45.66:67,0,46	0/0:11,0:16:8.52:0,9,42	0/0:20,0:20:12.48:0,12,121	0/0:13,0:14:5.85:0,6,46	0/0:7,0:8:17.88:0,18,173	1/1:25,0:25:18.06:261,18,0	1/1:17,0:16:7.26:77,7,0	1/1:20,5:24:8.99:109,9,0	0/1:9,4:15:21.91:114,0,22
chr10	8459431	.	C	CGTGT	3689.92	PASS	AB=0.819;AC=40;AF=0.800;AN=50;BaseQRankSum=-0.544;DP=782;FS=0.953;HRun=0;HaplotypeScore=153.3900;InbreedingCoeff=-0.1455;MQ=56.83;MQ0=19;MQRankSum=-0.888;QD=5.21;ReadPosRankSum=1.106;VQSLOD=2.8310;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:49,0:47:30.05:464,30,0	1/1:14,0:13:11.75:181,12,0	./.	./.	1/1:16,0:19:4.95:109,5,0	1/1:23,1:31:9.03:156,9,0	1/1:37,1:43:2.89:52,3,0	1/1:23,0:23:6.43:44,6,0	1/1:17,0:25:6.91:106,7,0	1/1:29,4:32:3.84:290,4,0	0/1:18,5:26:14.05:142,0,14	0/1:24,0:33:22.72:23,0,60	0/1:24,0:33:22.17:22,0,80	0/1:22,0:26:13.62:25,0,14	1/1:18,6:26:6.02:141,6,0	1/1:22,6:28:9.91:177,10,0	1/1:17,0:28:6.02:107,6,0	1/1:14,0:21:15.05:269,15,0	0/0:15,0:15:3.01:0,3,47	0/1:14,0:19:22.42:22,0,79	0/1:33,0:41:16.41:16,0,144	1/1:21,5:26:9.03:195,9,0	1/1:18,10:31:11.56:223,12,0	1/1:24,13:37:26.46:634,26,0	1/1:14,2:27:9.03:177,9,0	0/1:22,1:30:99:101,0,146	0/1:16,0:18:13.18:13,0,32	./.
chr10	8459683	.	G	GACACTTCC	23819.40	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=0.107;DP=803;FS=2.113;HRun=0;HaplotypeScore=209.5154;InbreedingCoeff=0.9063;MQ=82.42;MQ0=0;MQRankSum=-20.119;QD=97.22;ReadPosRankSum=-2.275;VQSLOD=4.9286;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,159,4232	0/0:6,0:6:15.05:0,15,430	0/0:31,0:31:84.24:0,84,2065	0/0:27,0:27:73.82:0,74,1822	0/0:17,0:17:48.16:0,48,1377	0/0:18,0:18:54.19:0,54,1550	0/0:29,0:28:81.28:0,81,2220	0/0:24,0:24:69.24:0,69,1968	1/1:6,21:28:75.26:3219,75,0	1/1:10,22:34:99:4118,99,0	1/1:8,13:21:57.20:2160,57,0	0/0:32,0:32:96.32:0,96,2621	0/0:43,0:43:99:0,120,3401	0/0:38,0:38:99:0,111,3158	1/1:8,35:44:99:5295,126,0	0/0:35,0:34:99:0,99,2830	0/0:25,0:25:72.25:0,72,2057	0/0:24,0:23:72.25:0,72,2007	0/0:18,0:18:51.16:0,51,1365	0/0:23,0:23:63.22:0,63,1808	0/0:37,0:37:99:0,108,3007	1/1:5,23:30:84.29:3341,84,0	1/1:8,23:33:93.32:3786,93,0	1/1:9,15:27:42.14:1845,42,0	0/0:29,0:29:84.29:0,84,2406	0/1:27,0:27:56.33:56,0,1992	0/0:33,0:33:81.28:0,81,2281	0/0:14,0:14:42.14:0,42,1206
chr10	8459928	.	AC	A	4228.03	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-1.038;DP=520;FS=2.872;HRun=8;HaplotypeScore=66.4947;InbreedingCoeff=0.9321;MQ=85.99;MQ0=0;MQRankSum=-1.036;QD=23.36;ReadPosRankSum=1.889;VQSLOD=5.7334;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,28:31:75.12:724,75,0	1/1:0,10:10:30.05:290,30,0	0/0:24,0:24:51.35:0,51,658	0/0:19,0:19:34.50:0,34,421	1/1:6,19:25:54.08:520,54,0	1/1:1,18:19:54.09:521,54,0	1/1:0,14:14:36.06:348,36,0	0/0:3,0:16:22.65:0,23,134	0/0:1,0:23:63.22:0,63,321	0/0:17,0:17:39.12:0,39,469	0/0:18,0:18:51.16:0,51,616	0/0:2,0:14:20.18:0,20,112	0/0:2,0:16:11.39:0,11,56	0/0:9,0:21:3.58:0,4,35	0/0:20,0:20:57.16:0,57,677	1/1:3,19:22:57.09:550,57,0	1/1:4,20:24:57.09:550,57,0	1/1:3,14:17:39.06:377,39,0	0/0:4,0:14:18.73:0,19,104	0/0:5,0:18:14.31:0,14,73	0/0:3,0:11:5.87:0,6,38	0/0:30,0:30:75.22:0,75,893	0/0:17,0:17:39.10:0,39,451	0/0:18,0:18:48.15:0,48,580	1/1:5,14:19:36.05:348,36,0	0/0:9,0:15:8.57:0,9,61	0/0:3,0:18:17.72:0,18,89	0/0:0,0:10:11.47:0,11,58
chr10	8462420	.	C	CGT	11333.12	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-9.577;DP=788;FS=16.150;HRun=0;HaplotypeScore=122.2479;InbreedingCoeff=0.9935;MQ=66.67;MQ0=2;MQRankSum=-2.559;QD=43.09;ReadPosRankSum=2.476;VQSLOD=5.2050;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,39:41:99:1787,102,0	1/1:0,15:14:30.10:526,30,0	0/0:21,0:21:45.85:0,46,558	0/0:12,0:12:10.70:0,11,203	1/1:2,37:40:96.33:1667,96,0	1/1:0,26:27:69.24:1209,69,0	1/1:1,25:26:72.25:1262,72,0	0/0:54,0:54:99:0,123,1510	0/0:22,0:22:57.17:0,57,754	0/0:36,0:36:99:0,102,1366	0/0:28,0:28:75.21:0,75,992	0/0:33,0:33:81.25:0,81,1078	0/0:29,0:29:75.23:0,75,997	0/0:30,0:30:81.25:0,81,1079	0/0:34,0:34:84.22:0,84,1072	1/1:2,32:34:78.27:1367,78,0	1/1:1,29:31:78.27:1360,78,0	1/1:0,27:27:69.24:1209,69,0	0/0:13,0:13:33.08:0,33,414	0/0:36,0:36:93.31:0,93,1257	0/0:32,0:32:93.27:0,93,1221	0/0:29,0:29:81.23:0,81,1048	0/0:23,0:23:60.20:0,60,811	0/0:16,0:15:42.12:0,42,551	1/1:1,20:21:54.19:946,54,0	0/0:32,0:32:84.28:0,84,1135	0/0:33,0:33:93.26:0,93,1200	0/0:12,0:12:36.12:0,36,486
chr10	8465149	.	CAGA	C	6163.56	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=9.602;DP=494;FS=0.782;HRun=0;HaplotypeScore=76.8460;InbreedingCoeff=0.9994;MQ=91.47;MQ0=0;MQRankSum=-4.402;QD=41.37;ReadPosRankSum=2.025;VQSLOD=5.9838;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,18:18:45.15:719,45,0	1/1:0,11:11:30.10:485,30,0	0/0:21,0:21:60.17:0,60,1199	0/0:23,0:23:54.43:0,54,1120	1/1:0,18:18:54.18:855,54,0	1/1:2,18:20:48.16:799,48,0	1/1:1,14:15:36.12:599,36,0	0/0:36,0:36:99:0,108,2409	0/0:14,0:14:42.14:0,42,951	0/0:12,0:12:36.12:0,36,797	0/0:16,0:16:48.16:0,48,1048	0/0:15,0:15:39.13:0,39,883	0/0:11,0:11:33.11:0,33,731	0/0:20,0:20:60.18:0,60,1286	0/0:26,0:26:78.25:0,78,1724	1/1:0,9:9:24.08:399,24,0	1/1:0,26:26:63.22:1048,63,0	1/1:1,14:15:33.07:520,33,0	0/0:16,0:16:45.15:0,45,1006	0/0:19,0:19:57.20:0,57,1273	0/0:14,0:14:39.13:0,39,864	0/0:13,0:13:39.13:0,39,882	0/0:14,0:14:42.14:0,42,934	0/0:15,0:15:39.13:0,39,865	1/1:0,17:17:48.08:739,48,0	0/0:13,0:13:36.12:0,36,791	0/0:31,0:31:93.32:0,93,2068	0/0:16,0:16:48.16:0,48,1086
chr10	8468298	.	AAAGGCTGCACGG	A	13960.26	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=17.209;DP=751;FS=1.099;HRun=0;HaplotypeScore=254.4589;InbreedingCoeff=0.9819;MQ=88.38;MQ0=0;MQRankSum=-13.298;QD=58.17;ReadPosRankSum=1.404;VQSLOD=4.5318;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,117,6634	0/0:22,0:22:57.19:0,57,3122	0/0:31,0:31:72.16:0,72,2779	0/0:30,0:30:65.62:0,66,2196	0/0:37,0:37:99:0,105,5613	0/0:24,0:23:60.11:0,60,3007	0/0:27,0:27:63.22:0,63,3348	1/1:6,22:28:66.16:1540,66,0	0/0:33,0:33:90.28:0,90,4695	0/0:32,0:32:84.25:0,84,4420	0/0:20,0:20:54.17:0,54,3007	1/1:4,26:30:63.22:2235,63,0	1/1:4,12:16:18.06:621,18,0	1/1:5,23:28:57.20:2046,57,0	0/0:24,0:24:60.18:0,60,3029	0/0:19,0:19:51.18:0,51,2896	0/0:33,0:33:96.33:0,96,5022	0/0:23,0:23:57.20:0,57,3258	1/1:7,18:25:54.13:1182,54,0	1/1:2,17:19:54.14:1851,54,0	1/1:5,24:29:18.06:633,18,0	0/0:35,0:35:84.29:0,84,4823	0/0:26,0:26:66.23:0,66,3856	0/0:29,0:29:72.25:0,72,3770	0/0:25,0:25:72.25:0,72,3484	1/1:5,25:30:75.25:2452,75,0	1/1:3,25:28:32.78:1184,33,0	1/1:5,2:7:6.02:215,6,0
chr10	8468795	.	T	TCTTAAA	50925.30	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-6.130;DP=696;FS=2.059;HRun=0;HaplotypeScore=143.6238;InbreedingCoeff=0.9830;MQ=80.08;MQ0=3;MQRankSum=-11.335;QD=79.57;ReadPosRankSum=2.549;VQSLOD=6.2400;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,17:29:60.21:1945,60,0	1/1:5,15:23:57.15:1907,57,0	0/0:26,0:26:72.22:0,72,1577	0/0:30,0:30:64.83:0,65,1544	1/1:6,19:27:63.13:1690,63,0	1/1:1,13:16:42.14:1475,42,0	1/1:5,8:17:36.12:1205,36,0	1/1:13,15:32:93.32:3003,93,0	1/1:3,19:24:60.21:2071,60,0	1/1:7,14:25:72.18:2146,72,0	1/1:1,16:19:51.13:1403,51,0	1/1:6,19:27:75.26:2567,75,0	1/1:3,25:29:75.26:2643,75,0	1/1:7,21:33:84.24:2669,84,0	1/1:6,19:28:57.20:1945,57,0	1/1:4,26:34:84.29:2916,84,0	1/1:7,9:16:33.05:1180,33,0	1/1:3,6:9:24.04:718,24,0	1/1:3,11:17:42.12:1388,42,0	1/1:9,28:39:99:3355,105,0	1/1:8,11:19:45.15:1285,45,0	1/1:7,22:31:78.18:2395,78,0	1/1:7,18:30:66:2100,66,0	1/1:5,9:17:36.04:1044,36,0	1/1:2,24:31:72.25:2431,72,0	1/1:6,21:31:93.21:2845,93,0	1/1:10,16:28:69.24:2221,69,0	1/1:1,4:5:12.04:380,12,0
chr10	8473794	.	AGT	A	8409.43	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=15.941;DP=757;FS=22.787;HRun=0;HaplotypeScore=95.0666;InbreedingCoeff=0.9921;MQ=68.77;MQ0=2;MQRankSum=0.380;QD=30.25;ReadPosRankSum=0.775;VQSLOD=4.1451;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:72.23:0,72,1172	0/0:14,0:14:39.13:0,39,658	0/0:39,0:30:34.90:0,35,825	0/0:22,0:17:31.01:0,31,556	0/0:29,0:29:84.29:0,84,1417	0/0:38,0:38:99:0,102,1704	0/0:23,0:23:63.21:0,63,1035	1/1:7,15:22:42.12:526,42,0	0/0:21,0:21:60.19:0,60,964	0/0:29,1:30:48.78:0,49,1378	0/0:26,0:26:72.23:0,72,1188	1/1:3,22:25:60.15:749,60,0	1/1:4,23:27:66.21:850,66,0	1/1:2,29:31:78.21:985,78,0	0/0:31,0:31:90.29:0,90,1488	0/0:19,0:19:57.18:0,57,935	0/0:32,0:31:93.32:0,93,1556	0/0:28,0:29:69.24:0,69,1147	1/1:5,13:18:39.07:469,39,0	1/1:6,38:44:63.62:1322,64,0	1/1:3,24:27:63.20:811,63,0	0/0:16,1:17:9.55:0,10,720	0/0:30,0:29:84.25:0,84,1388	0/0:29,0:29:84.29:0,84,1401	0/0:20,0:20:57.19:0,57,953	1/1:7,29:36:45.65:1117,46,0	1/1:1,25:26:75.24:965,75,0	1/1:6,16:21:48.15:616,48,0
chr10	8474275	.	A	AGCCT	4666.08	PASS	AB=1.000;AC=18;AF=0.321;AN=56;BaseQRankSum=0.409;DP=650;FS=0.000;HRun=0;HaplotypeScore=140.2037;InbreedingCoeff=0.7529;MQ=63.36;MQ0=1;MQRankSum=-0.368;QD=19.69;ReadPosRankSum=3.377;VQSLOD=4.2488;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,102,1622	0/0:13,0:13:30.07:0,30,456	0/0:11,0:10:24.08:0,24,395	0/0:14,0:14:19.24:0,19,345	0/0:32,0:32:75.25:0,75,1193	0/0:27,0:27:72.25:0,72,1186	0/0:21,0:21:51.10:0,51,748	0/0:30,0:30:12.38:0,12,48	1/1:17,0:17:39.06:629,39,0	1/1:27,0:25:60.15:1046,60,0	1/1:7,11:21:15.05:181,15,0	0/0:25,0:25:16.57:0,17,175	0/0:21,0:21:14.96:0,15,107	1/1:32,0:32:4.56:19,5,0	1/1:20,0:20:51.17:963,51,0	0/0:27,0:27:69.23:0,69,1101	0/0:23,0:23:45.15:0,45,733	0/0:11,0:11:30.10:0,30,488	0/0:20,0:20:2.82:0,3,26	0/1:20,0:20:4.23:4,0,31	0/0:21,0:21:2.92:0,3,56	1/1:22,1:22:33:540,33,0	1/1:23,0:22:27.08:407,27,0	1/1:22,2:23:46.87:834,47,0	0/0:28,0:28:69.22:0,69,1090	0/1:30,0:30:40.73:41,0,113	0/0:27,0:27:5.34:0,5,72	0/0:24,0:24:19.31:0,19,278
chr10	8474285	.	CCTTT	C	1753.39	PASS	AB=0.958;AC=23;AF=0.479;AN=48;BaseQRankSum=-1.226;DP=666;FS=14.608;HRun=0;HaplotypeScore=140.6961;InbreedingCoeff=0.5749;MQ=56.77;MQ0=13;MQRankSum=3.126;QD=5.35;ReadPosRankSum=2.397;VQSLOD=2.0190;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:36,0:35:48.02:502,48,0	0/0:12,0:12:12.03:0,12,178	./.	./.	0/1:30,0:30:99:194,0,148	1/1:25,0:26:32.55:370,33,0	./.	./.	1/1:16,0:16:5.94:42,6,0	0/0:31,0:28:26.87:0,27,252	0/0:25,0:25:6.02:0,6,84	1/1:23,0:23:24.04:265,24,0	0/1:19,0:19:29.12:29,0,39	1/1:33,0:33:2.83:14,3,0	0/0:19,0:19:18.04:0,18,233	0/1:24,4:28:29.86:30,0,141	0/0:22,0:22:30.03:0,30,340	1/1:13,0:12:9.01:108,9,0	1/1:22,0:21:9.01:82,9,0	1/1:20,0:20:5.92:43,6,0	0/0:18,0:18:2.43:0,2,24	0/0:23,0:22:12:0,12,111	0/0:29,0:28:27.34:0,27,235	0/0:25,0:24:33.38:0,33,314	0/0:28,0:28:33.02:0,33,401	1/1:32,0:32:23.98:213,24,0	1/1:30,0:29:3.01:41,3,0	0/0:25,0:23:11.01:0,11,130
chr10	8474337	.	TCTTTCTTC	T	1971.22	PASS	AB=0.908;AC=23;AF=0.442;AN=52;BaseQRankSum=0.975;DP=428;FS=16.845;HRun=0;HaplotypeScore=97.5538;InbreedingCoeff=0.4765;MQ=42.47;MQ0=45;MQRankSum=2.427;QD=8.32;ReadPosRankSum=0.512;VQSLOD=0.8959;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:24:21.33:368,21,0	0/0:6,0:6:12.04:0,12,280	./.	./.	0/1:22,0:17:99:168,0,198	0/1:25,0:20:55.12:169,0,55	0/0:19,0:8:12.09:0,12,66	1/1:22,0:13:10.32:85,10,0	1/1:12,0:11:1.97:67,2,0	0/0:19,0:14:23.33:0,23,399	0/0:13,0:13:14.92:0,15,215	1/1:10,0:9:26.96:369,27,0	0/1:2,11:13:49.03:49,0,63	1/1:2,19:20:2.78:14,3,0	0/0:11,0:11:18.05:0,18,348	0/1:15,0:13:28.47:28,0,264	0/0:19,0:16:36.20:0,36,641	0/1:8,0:6:8.99:75,0,9	1/1:16,0:11:20.78:187,21,0	1/1:5,0:3:5.92:43,6,0	0/0:6,0:4:2.49:0,2,44	0/0:14,0:12:20.52:0,21,196	0/0:20,0:18:39.98:0,40,438	0/0:28,0:22:21.17:0,21,520	0/0:16,0:16:36:0,36,613	1/1:2,17:18:41.78:433,42,0	1/1:4,17:18:5.98:102,6,0	0/0:15,0:11:20.55:0,21,249
chr10	8474563	.	G	GA	6219.55	PASS	AC=32;AF=0.593;AN=54;BaseQRankSum=-5.559;DP=303;FS=3.624;HRun=1;HaplotypeScore=89.0792;InbreedingCoeff=0.9438;MQ=69.62;MQ0=0;MQRankSum=-2.205;QD=35.34;ReadPosRankSum=-0.026;VQSLOD=4.7064;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:10:23.77:0,24,273	0/0:7,0:7:21.06:0,21,260	0/0:7,0:7:12.04:0,12,150	0/0:11,0:11:33.07:0,33,405	0/0:15,0:15:17.67:0,18,234	0/0:20,0:16:32.72:0,33,454	0/0:16,0:16:45.14:0,45,572	1/1:2,22:24:68.97:997,69,0	1/1:2,3:5:8.99:109,9,0	1/1:0,18:18:51.64:761,52,0	1/1:1,13:14:24.04:333,24,0	1/1:0,7:7:18.42:240,18,0	1/1:1,13:14:39.13:582,39,0	1/1:1,5:5:6.02:89,6,0	1/1:0,5:5:15.05:223,15,0	0/0:18,0:16:41.34:0,41,500	0/0:3,0:3:9.03:0,9,116	0/0:4,0:4:9.03:0,9,116	1/1:2,6:8:21.07:314,21,0	1/1:0,9:9:24.04:333,24,0	1/1:1,10:11:27.09:403,27,0	1/1:0,10:10:15.05:224,15,0	1/1:1,13:14:36.08:512,36,0	1/1:2,8:10:17.97:218,18,0	0/0:14,0:14:39.58:0,40,474	1/1:0,9:9:27.09:403,27,0	1/1:0,10:12:33.11:479,33,0	./.
chr10	8474643	.	GA	G	4340.68	PASS	AC=32;AF=0.593;AN=54;BaseQRankSum=3.681;DP=314;FS=11.718;HRun=8;HaplotypeScore=89.8889;InbreedingCoeff=0.9128;MQ=78.11;MQ0=0;MQRankSum=-1.927;QD=26.31;ReadPosRankSum=2.652;VQSLOD=4.6217;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,1:15:15.02:0,15,447	0/0:5,0:5:15.04:0,15,170	0/0:22,0:15:2.02:0,2,263	0/0:11,0:5:20.27:0,20,197	0/0:14,0:14:24.54:0,25,290	0/0:20,0:19:56.14:0,56,612	0/0:21,0:21:63.19:0,63,757	1/1:0,32:32:96.11:908,96,0	1/1:0,11:11:27.04:260,27,0	1/1:0,10:10:30.05:289,30,0	1/1:0,3:3:6.01:58,6,0	1/1:1,11:12:32.17:288,32,0	1/1:0,10:10:27.04:260,27,0	1/1:0,13:13:36.06:346,36,0	1/1:0,11:11:33.05:318,33,0	0/0:11,0:11:29.30:0,29,328	0/0:10,1:10:21.02:0,21,237	0/0:6,0:6:18.06:0,18,217	1/1:1,8:9:24.04:232,24,0	1/1:0,6:6:18.03:173,18,0	1/1:0,4:4:12.02:116,12,0	1/1:0,1:1:3:29,3,0	1/1:0,12:12:36.06:347,36,0	1/1:1,9:10:21.03:202,21,0	0/0:11,0:11:19.18:0,19,293	1/1:0,14:15:28.54:341,29,0	1/1:0,6:6:18.03:173,18,0	./.
chr10	8474712	.	GAC	G	803.04	PASS	AB=0.929;AC=24;AF=0.480;AN=50;BaseQRankSum=0.440;DP=392;FS=7.431;HRun=0;HaplotypeScore=68.5430;InbreedingCoeff=0.0170;MQ=73.96;MQ0=12;MQRankSum=-1.052;QD=3.82;ReadPosRankSum=-0.205;VQSLOD=0.8697;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:14:3.43:20,3,0	1/1:4,2:6:3.01:32,3,0	./.	./.	0/1:18,1:18:16.23:53,0,16	0/0:10,0:9:2.68:0,3,11	1/1:11,3:16:14.70:125,15,0	0/0:29,0:29:0:0,0,0	./.	0/1:12,0:11:14.77:15,0,66	0/1:10,0:10:11.81:12,0,92	0/0:11,0:10:6.29:0,6,51	0/0:16,0:17:21:0,21,228	0/0:12,0:13:6.95:0,7,71	0/1:10,1:11:23.30:23,0,76	1/1:7,6:13:9.49:98,9,0	0/1:12,3:16:26.62:107,0,27	1/1:10,2:13:11.86:105,12,0	0/1:17,0:16:16.83:17,0,55	0/0:14,0:12:11.98:0,12,97	0/0:15,0:12:1.82:0,2,5	0/1:7,1:7:23.27:23,0,78	0/1:9,1:10:26.32:26,0,70	0/1:19,4:23:99:99,0,164	0/1:5,0:5:0.71:15,0,1	0/0:15,0:15:4.56:0,5,41	1/1:6,4:10:15.04:161,15,0	1/1:6,0:6:2.99:23,3,0
chr10	8474793	.	AT	A	3172.27	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=3.066;DP=393;FS=9.032;HRun=8;HaplotypeScore=56.7669;InbreedingCoeff=0.9869;MQ=83.98;MQ0=0;MQRankSum=-0.804;QD=23.33;ReadPosRankSum=-1.170;VQSLOD=3.4838;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:33.10:0,33,399	0/0:4,0:4:12.04:0,12,145	0/0:18,0:18:38.72:0,39,395	0/0:14,0:13:27.08:0,27,313	0/0:16,0:16:39.11:0,39,459	0/0:18,0:18:54.17:0,54,652	0/0:19,0:19:54.12:0,54,636	1/1:3,20:23:60.05:570,60,0	0/0:7,0:7:18.06:0,18,217	0/0:21,0:21:57.17:0,57,688	0/0:7,0:7:21.06:0,21,253	1/1:4,15:19:54.06:513,54,0	1/1:3,7:10:18.03:174,18,0	1/1:0,7:7:21.03:202,21,0	0/0:14,0:14:36.07:0,36,418	0/0:14,0:14:36.07:0,36,418	0/0:14,0:14:36.11:0,36,435	0/0:10,0:10:21.04:0,21,240	1/1:1,9:10:27.04:261,27,0	1/1:0,14:14:42.07:406,42,0	1/1:1,11:12:30.05:290,30,0	0/0:16,0:16:45.14:0,45,540	0/0:16,0:16:42.13:0,42,505	0/0:21,0:21:57.13:0,57,672	0/0:10,0:10:27.06:0,27,304	1/1:3,17:20:17.88:456,18,0	1/1:1,15:16:39.06:376,39,0	1/1:0,5:5:15.02:145,15,0
chr10	8474925	.	C	CA	4290.51	PASS	AB=1.000;AC=35;AF=0.625;AN=56;BaseQRankSum=-0.308;DP=337;FS=3.590;HRun=6;HaplotypeScore=85.2201;InbreedingCoeff=0.8419;MQ=75.14;MQ0=3;MQRankSum=-3.787;QD=21.78;ReadPosRankSum=1.641;VQSLOD=4.0408;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:12.82:0,13,195	0/0:3,0:3:2.99:0,3,25	0/0:24,0:16:24.14:0,24,186	0/1:29,0:20:17.26:17,0,121	0/0:24,0:24:49.16:0,49,500	0/0:9,0:9:14.95:0,15,131	0/0:12,0:12:12.02:0,12,122	1/1:8,7:14:27.08:326,27,0	1/1:2,10:12:30.09:387,30,0	1/1:1,7:8:24.03:274,24,0	1/1:3,8:11:20.98:237,21,0	1/1:5,7:12:24.03:280,24,0	1/1:6,4:10:20.58:205,21,0	1/1:2,7:9:18.94:225,19,0	1/1:4,10:14:35.99:394,36,0	0/0:14,0:14:23.84:0,24,228	0/0:18,0:18:15.49:0,15,207	0/0:8,0:8:11.86:0,12,109	1/1:3,5:8:20.99:232,21,0	1/1:3,8:11:30.02:343,30,0	1/1:1,3:4:9.02:102,9,0	1/1:1,6:7:18.06:222,18,0	1/1:8,9:17:29.99:336,30,0	1/1:1,6:7:8.78:111,9,0	0/0:13,0:13:17.89:0,18,157	1/1:4,7:11:24.01:265,24,0	1/1:3,6:9:21.07:260,21,0	1/1:0,2:2:6.02:74,6,0
chr10	8474941	.	C	CA	2334.41	PASS	AB=0.970;AC=50;AF=0.893;AN=56;BaseQRankSum=-1.741;DP=365;FS=8.758;HRun=12;HaplotypeScore=100.5467;InbreedingCoeff=-0.1221;MQ=66.45;MQ0=6;MQRankSum=-2.890;QD=6.40;ReadPosRankSum=0.357;VQSLOD=1.9502;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:15:4.02:103,4,0	1/1:6,0:6:10.46:46,10,0	0/1:21,0:9:4.08:10,0,4	0/1:24,0:18:17.64:34,0,18	1/1:24,0:27:35.62:192,36,0	1/1:11,0:12:14:67,14,0	1/1:17,0:18:17.51:100,18,0	1/1:17,4:19:27.75:244,28,0	0/1:9,0:10:2.96:27,0,3	0/1:6,0:8:1.40:26,0,1	1/1:9,0:10:8.96:43,9,0	0/1:14,2:16:43.90:61,0,44	1/1:8,7:15:24.39:198,24,0	1/1:8,5:13:18.03:175,18,0	1/1:8,0:11:11.81:55,12,0	1/1:14,1:15:5.84:43,6,0	1/1:16,3:21:23.03:154,23,0	1/1:8,0:8:8.56:43,9,0	0/1:12,1:9:6.26:83,0,6	1/1:6,5:10:13.51:143,14,0	1/1:3,2:5:5.03:71,5,0	1/1:4,0:6:4.40:24,4,0	1/1:11,0:13:9.33:59,9,0	1/1:6,0:6:2.44:11,2,0	1/1:11,0:11:7.60:35,8,0	1/1:12,3:15:2.54:204,3,0	1/1:7,3:10:14.99:136,15,0	1/1:0,2:2:6.01:58,6,0
chr10	8474946	.	A	AC	539.33	PASS	AB=0.903;AC=20;AF=0.357;AN=56;BaseQRankSum=4.644;DP=394;FS=14.332;HRun=0;HaplotypeScore=113.3116;InbreedingCoeff=-0.1917;MQ=63.78;MQ0=8;MQRankSum=-3.430;QD=2.12;ReadPosRankSum=4.636;VQSLOD=0.9783;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:23.24:0,23,132	0/0:6,0:6:11.02:0,11,50	0/1:22,0:10:10.43:10,0,75	0/1:23,0:17:11.99:12,0,101	0/0:29,0:28:47.85:0,48,304	0/0:11,0:11:14.06:0,14,72	0/0:18,0:18:13.98:0,14,114	0/1:19,0:17:9.28:9,0,125	0/1:9,5:14:19.09:68,0,19	0/1:9,4:13:2.95:89,0,3	0/1:8,6:13:9.05:95,0,9	0/0:14,0:14:4.57:0,5,151	0/1:14,0:14:16.66:17,0,57	0/1:12,0:12:31.63:33,0,32	0/1:17,5:22:16.11:118,0,16	0/0:13,0:13:8:0,8,65	0/1:20,0:20:0.02:0,0,62	0/0:9,0:9:8.17:0,8,40	0/0:11,0:6:3.01:0,3,65	0/1:11,0:10:9.19:9,0,68	0/1:6,0:6:6.38:6,0,26	0/1:5,3:8:1.57:47,0,2	0/1:11,8:19:22.56:100,0,23	1/1:5,3:8:5.65:39,6,0	0/0:11,0:11:14.46:0,14,90	0/1:16,0:15:8.17:8,0,136	0/1:12,0:12:16.79:17,0,34	1/1:2,0:2:4.59:15,5,0
chr10	8474948	.	A	AC	1088.61	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=3.351;DP=398;FS=11.238;HRun=0;HaplotypeScore=111.9875;InbreedingCoeff=0.3171;MQ=61.85;MQ0=10;MQRankSum=-3.744;QD=5.70;ReadPosRankSum=4.320;VQSLOD=2.9253;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:25.93:0,26,146	0/0:7,0:7:13.75:0,14,63	0/0:24,0:9:12.29:0,12,107	0/0:23,0:17:0.42:0,0,130	0/0:29,0:28:46.73:0,47,317	0/0:11,0:11:14.36:0,14,78	0/0:17,0:17:8.25:0,8,69	0/1:20,0:18:27.51:28,0,86	1/1:8,5:14:21.99:144,22,0	1/1:10,4:14:16.95:166,17,0	1/1:8,5:12:21.07:127,21,0	0/0:15,0:15:3.51:0,4,154	0/1:14,0:14:23.75:24,0,33	0/1:11,0:11:7.82:38,0,8	1/1:17,5:22:51.45:327,51,0	0/0:13,0:13:5.08:0,5,40	0/0:20,0:20:1.72:0,2,75	0/0:9,0:9:8.29:0,8,47	0/0:10,0:5:0.01:0,0,38	0/1:11,0:10:10.28:10,0,64	0/1:5,0:5:9.30:9,0,12	1/1:6,3:8:13.86:82,14,0	1/1:11,9:20:22.87:202,23,0	1/1:5,3:8:2.68:17,3,0	0/0:11,0:11:14.51:0,15,91	0/1:16,0:15:25.82:26,0,94	0/1:12,0:12:5.98:53,0,6	1/1:2,0:2:4.59:15,5,0
chr10	8474951	.	A	AAAAAC	5963.98	PASS	AB=1.000;AC=52;AF=0.929;AN=56;BaseQRankSum=0.893;DP=418;FS=15.986;HRun=0;HaplotypeScore=120.6538;InbreedingCoeff=0.0163;MQ=60.14;MQ0=11;MQRankSum=-2.851;QD=14.27;ReadPosRankSum=2.017;VQSLOD=3.6251;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:3,0:20:2.70:401,3,0	1/1:1,6:8:14.94:252,15,0	0/1:27,0:9:2.64:3,0,73	0/1:25,0:16:19.16:19,0,32	1/1:7,12:29:59.05:1004,59,0	1/1:1,8:12:15.05:406,15,0	1/1:4,8:18:18.92:309,19,0	1/1:20,0:18:22.15:172,22,0	1/1:13,0:13:35.04:305,35,0	1/1:14,0:14:31.75:218,32,0	1/1:11,0:11:28.50:233,28,0	0/1:15,0:15:28.37:63,0,28	1/1:15,0:15:14.84:72,15,0	1/1:12,0:12:19.16:140,19,0	1/1:23,0:23:56.32:349,56,0	1/1:2,8:14:6.02:133,6,0	1/1:6,11:22:23.50:426,23,0	1/1:1,6:9:9.03:225,9,0	1/1:11,0:6:14.14:104,14,0	1/1:11,0:10:5.50:62,6,0	1/1:5,0:5:7.70:36,8,0	1/1:10,0:9:19.22:124,19,0	1/1:22,0:22:46.94:266,47,0	1/1:8,0:8:6.17:30,6,0	1/1:1,9:12:15.04:271,15,0	0/1:16,0:15:17.83:166,0,18	1/1:12,0:12:22.73:138,23,0	1/1:2,0:2:5.50:36,5,0
chr10	8474952	.	AAC	A	272.50	PASS	AB=0.966;AC=16;AF=0.286;AN=56;BaseQRankSum=-4.144;DP=412;FS=3.487;HRun=0;HaplotypeScore=117.6732;InbreedingCoeff=-0.1891;MQ=61.25;MQ0=11;MQRankSum=-0.018;QD=1.17;ReadPosRankSum=-4.497;VQSLOD=0.0867;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:20.03:0,20,185	0/1:9,0:9:2.33:2,0,115	0/1:27,0:9:1.94:2,0,79	0/1:23,1:15:59.33:60,0,59	0/1:29,0:29:4.27:4,0,300	0/0:11,0:11:10.36:0,10,88	0/1:15,1:16:30.40:30,0,63	0/1:18,2:18:60.80:61,0,165	0/0:13,0:13:35.54:0,36,209	0/0:14,0:14:41.12:0,41,345	0/0:12,0:11:27.41:0,27,169	0/0:15,0:15:3.96:0,4,189	0/1:15,0:15:6.24:6,0,108	0/1:11,1:12:8.30:8,0,90	0/0:23,0:23:61.18:0,61,459	0/0:11,0:11:5.97:0,6,51	0/1:23,0:23:1:1,0,164	0/0:9,0:9:8.98:0,9,73	0/1:9,2:6:60.43:68,0,60	0/1:11,0:10:13.17:13,0,82	1/1:4,1:5:8.97:77,9,0	0/0:10,0:9:18.59:0,19,127	0/0:22,0:22:55.32:0,55,355	0/0:8,0:8:6.78:0,7,45	0/0:12,0:12:7.86:0,8,81	0/1:15,1:15:48.73:49,0,195	0/1:12,0:12:27.91:28,0,71	0/1:2,0:2:7.50:7,0,9
chr10	8474969	.	C	CAAAAAAA	5853.84	PASS	AB=0.981;AC=34;AF=0.607;AN=56;BaseQRankSum=-1.595;DP=446;FS=7.381;HRun=8;HaplotypeScore=141.3550;InbreedingCoeff=0.0057;MQ=63.91;MQ0=10;MQRankSum=-5.114;QD=15.45;ReadPosRankSum=-2.930;VQSLOD=0.6236;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:9.40:0,9,153	0/0:9,0:9:22.18:0,22,246	0/0:29,0:16:19.16:0,19,647	0/1:14,0:11:6.55:7,0,185	0/1:23,0:23:75.91:76,0,301	0/1:11,0:11:6.93:7,0,100	0/1:15,0:15:25.13:25,0,134	1/1:15,2:15:32.96:605,33,0	0/1:14,0:15:37.70:155,0,38	0/1:17,0:18:99:188,0,132	0/1:18,0:19:98.19:231,0,98	1/1:5,10:18:14.97:291,15,0	1/1:18,0:19:41.85:568,42,0	1/1:5,8:15:18.12:326,18,0	0/1:27,0:27:99:230,0,171	0/1:15,0:15:8.98:9,0,195	0/1:24,0:24:0.53:1,0,371	0/0:10,0:10:6.97:0,7,130	1/1:4,6:8:24.05:635,24,0	1/1:7,0:12:17.94:266,18,0	1/1:6,0:6:17.98:227,18,0	0/1:11,0:10:43.59:44,0,63	0/1:24,0:24:99:103,0,217	0/1:9,0:9:12.51:13,0,64	0/1:15,0:15:37.99:38,0,324	1/1:4,13:18:48.57:1086,49,0	1/1:4,8:15:21.01:499,21,0	1/1:3,1:4:12.02:227,12,0
chr10	8477571	.	T	TCACACA	1084.39	PASS	AB=1.000;AC=18;AF=0.321;AN=56;BaseQRankSum=3.925;DP=603;FS=7.513;HRun=0;HaplotypeScore=158.7744;InbreedingCoeff=0.4252;MQ=76.23;MQ0=17;MQRankSum=-1.013;QD=4.80;ReadPosRankSum=-4.207;VQSLOD=0.5748;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:66.21:0,66,1218	0/0:14,0:14:33.11:0,33,653	0/0:53,0:32:81.18:0,81,1331	0/0:43,0:27:55.47:0,55,914	0/0:21,0:21:34.84:0,35,503	0/0:22,0:22:58.11:0,58,986	0/0:28,0:28:58.47:0,58,1192	0/1:20,0:20:1.20:68,0,1	0/1:22,0:22:26.63:27,0,231	1/1:14,0:14:3.12:405,3,0	1/1:12,0:11:0.47:1,0,0	0/0:19,0:19:20.69:0,21,256	0/0:14,0:14:13.09:0,13,182	0/1:16,0:16:32.76:33,0,99	1/1:17,7:29:9.76:377,10,0	0/0:19,0:19:51.11:0,51,928	0/0:32,0:32:69.16:0,69,1207	0/1:30,0:30:6.58:7,0,1306	0/1:14,0:13:9.52:10,0,62	0/0:11,0:11:3.01:0,3,36	1/1:14,0:21:11.61:67,12,0	1/1:17,0:17:12.02:137,12,0	1/1:21,0:21:10.37:119,10,0	0/0:15,14:32:1.90:0,2,5	0/0:14,0:14:36.08:0,36,573	0/1:10,0:10:0.59:1,0,67	0/0:11,0:11:2.11:0,2,35	0/0:15,0:15:12.04:0,12,144
chr10	8477576	.	CACAT	C	2275.40	PASS	AB=0.994;AC=26;AF=0.464;AN=56;BaseQRankSum=0.539;DP=650;FS=2.350;HRun=0;HaplotypeScore=129.5543;InbreedingCoeff=0.4260;MQ=71.08;MQ0=17;MQRankSum=1.114;QD=7.36;ReadPosRankSum=-3.192;VQSLOD=2.2685;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:62.69:0,63,1204	0/0:14,0:14:31.33:0,31,704	0/0:49,0:28:74.21:0,74,756	0/0:41,0:25:56.15:0,56,530	0/0:22,0:22:39:0,39,493	0/0:26,0:26:43.17:0,43,1120	0/0:34,0:34:56.31:0,56,1012	1/1:20,0:20:56.74:463,57,0	0/1:24,1:25:99:270,0,177	0/0:17,0:17:2.05:0,2,338	0/1:14,0:13:32.36:100,0,32	1/1:18,2:20:8.57:120,9,0	1/1:15,2:17:6.85:135,7,0	1/1:21,2:23:47.72:455,48,0	0/1:27,0:27:99:130,0,140	0/0:23,0:23:50.90:0,51,1125	0/0:31,0:31:27.79:0,28,1097	0/0:34,0:34:64.58:0,65,1469	1/1:17,0:16:12.83:182,13,0	1/1:14,0:14:0.47:1,0,0	0/1:22,0:22:85.03:85,0,88	0/1:17,0:17:78.28:102,0,78	0/1:21,0:21:86:113,0,86	1/1:27,0:27:14.84:115,15,0	0/0:19,0:19:51.08:0,51,845	1/1:14,0:14:8.53:171,9,0	1/1:15,0:15:3.19:17,3,0	1/1:16,0:16:1.89:5,2,0
chr10	8477578	.	CAT	C	3654.44	PASS	AB=0.975;AC=31;AF=0.554;AN=56;BaseQRankSum=0.540;DP=649;FS=4.321;HRun=0;HaplotypeScore=106.6026;InbreedingCoeff=0.5256;MQ=69.68;MQ0=18;MQRankSum=0.744;QD=10.07;ReadPosRankSum=-3.855;VQSLOD=2.3078;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,8:32:23.74:0,24,859	0/1:11,3:14:5.61:6,0,468	0/0:49,0:28:74.21:0,74,756	0/0:39,0:23:59.63:0,60,535	0/0:23,0:23:39.46:0,39,372	0/1:27,0:27:15.67:16,0,681	0/0:35,0:35:30.61:0,31,727	1/1:19,0:19:56.79:466,57,0	0/1:26,0:26:34.37:322,0,34	0/1:16,0:16:60.65:61,0,74	1/1:13,0:12:4.93:152,5,0	1/1:2,18:20:21.04:277,21,0	1/1:2,15:17:20.69:220,21,0	1/1:22,1:23:55.95:500,56,0	0/1:26,0:26:2.44:134,0,2	0/0:23,0:23:25.93:0,26,738	0/0:31,0:31:14.01:0,14,685	0/0:34,0:34:31.07:0,31,963	1/1:1,15:15:39.24:316,39,0	1/1:1,13:14:3.01:46,3,0	1/1:20,0:20:21.43:167,21,0	0/1:17,0:17:2.62:106,0,3	0/1:22,0:22:1.23:182,0,1	1/1:27,0:28:14.71:116,15,0	0/0:19,0:19:50.32:0,50,529	1/1:1,13:14:22.94:326,23,0	1/1:0,15:15:5.78:61,6,0	1/1:0,16:16:12.04:182,12,0
chr10	8477580	.	T	TAC	579.56	PASS	AB=0.994;AC=19;AF=0.380;AN=50;BaseQRankSum=2.363;DP=649;FS=0.844;HRun=0;HaplotypeScore=124.3596;InbreedingCoeff=0.4163;MQ=67.36;MQ0=21;MQRankSum=1.070;QD=2.18;ReadPosRankSum=-3.168;VQSLOD=1.7356;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:31:38.62:0,39,377	0/0:14,0:14:29.86:0,30,301	./.	./.	1/1:13,9:24:14.74:205,15,0	0/0:25,0:27:37.22:0,37,319	0/0:34,0:34:30.65:0,31,302	./.	0/1:27,0:27:47.51:48,0,89	1/1:16,0:16:12.39:129,12,0	0/1:14,0:12:0:0,0,0	0/0:20,0:20:18.64:0,19,80	0/0:19,0:19:12.63:0,13,56	0/1:22,0:22:13.24:13,0,25	1/1:26,0:26:11.97:104,12,0	0/1:23,1:24:8.13:8,0,305	0/0:30,0:32:38.59:0,39,317	0/0:34,0:36:28.89:0,29,451	0/1:17,0:16:10:10,0,13	0/0:13,0:13:2.68:0,3,11	1/1:18,0:18:4.37:47,4,0	1/1:16,0:16:6.02:85,6,0	1/1:21,0:21:8.20:77,8,0	0/1:26,0:26:0.13:0,0,0	0/0:18,0:18:30.06:0,30,312	0/1:15,0:15:14.98:16,0,15	0/0:15,0:15:2.52:0,3,11	0/0:17,0:17:10.71:0,11,45
chr10	8477913	.	TAAAA	T	4169.33	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=12.155;DP=489;FS=2.485;HRun=16;HaplotypeScore=103.4615;InbreedingCoeff=0.9886;MQ=70.81;MQ0=1;MQRankSum=-3.606;QD=24.10;ReadPosRankSum=4.651;VQSLOD=3.0320;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:32:93:0,93,1619	0/0:5,0:8:21.03:0,21,397	0/0:34,0:18:25.98:0,26,391	0/0:19,0:13:18.77:0,19,146	0/0:27,0:30:81.27:0,81,1544	0/0:11,0:13:36.12:0,36,755	0/0:13,0:18:51.15:0,51,935	1/1:6,15:21:47.99:615,48,0	0/0:0,0:9:20.56:0,21,139	0/0:9,0:17:30.06:0,30,357	0/0:8,0:12:23.98:0,24,269	1/1:2,11:13:29.89:361,30,0	1/1:8,11:19:26.84:343,27,0	1/1:2,16:19:39.04:497,39,0	0/0:5,0:12:21.05:0,21,289	0/0:21,0:23:57.02:0,57,1112	0/0:13,0:15:33.11:0,33,610	0/0:10,0:11:28.91:0,29,552	1/1:4,10:14:29.97:387,30,0	1/1:4,16:20:33.77:417,34,0	1/1:5,7:12:11.86:158,12,0	0/0:3,0:8:18.05:0,18,229	0/0:10,0:22:28.16:0,28,358	0/0:3,0:18:35.85:0,36,375	0/0:14,0:14:39.13:0,39,800	1/1:5,19:25:53.98:644,54,0	1/1:4,17:21:41.96:552,42,0	1/1:1,5:8:17.90:196,18,0
chr10	8478016	.	GA	G	4440.09	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=12.899;DP=504;FS=16.442;HRun=9;HaplotypeScore=50.3946;InbreedingCoeff=0.9703;MQ=71.88;MQ0=0;MQRankSum=0.239;QD=23.01;ReadPosRankSum=0.851;VQSLOD=3.8011;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:72.21:0,72,831	0/0:5,0:5:12.04:0,12,138	0/0:14,0:12:21.06:0,21,236	0/0:7,0:8:3.90:0,4,137	0/0:30,0:30:81.23:0,81,926	0/0:19,0:19:54.16:0,54,623	0/0:16,0:16:48.13:0,48,544	1/1:5,18:23:22.40:459,22,0	0/0:13,0:13:36.11:0,36,415	0/0:21,0:21:54.16:0,54,623	0/0:21,0:21:54.16:0,54,623	1/1:2,16:18:42.02:384,42,0	1/1:5,18:23:54.02:494,54,0	1/1:2,15:17:45.02:412,45,0	0/0:23,0:23:66.20:0,66,761	0/0:14,0:14:36.08:0,36,397	0/0:32,0:32:87.24:0,87,993	0/0:16,0:16:30.09:0,30,346	1/1:1,8:9:24.01:220,24,0	1/1:1,19:20:57.03:522,57,0	1/1:0,11:11:30.02:275,30,0	0/0:10,0:10:30.09:0,30,346	0/0:18,0:18:42.12:0,42,480	0/0:9,0:9:18.05:0,18,208	0/0:17,0:17:48.12:0,48,537	1/1:4,34:38:99:933,102,0	1/1:2,17:19:42.02:384,42,0	1/1:1,14:15:38.76:357,39,0
chr10	8478173	.	G	GA	6607.48	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-13.447;DP=547;FS=8.656;HRun=6;HaplotypeScore=50.1724;InbreedingCoeff=0.9957;MQ=86.18;MQ0=0;MQRankSum=-3.584;QD=32.23;ReadPosRankSum=0.307;VQSLOD=4.8152;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:66.11:0,66,659	0/0:8,0:8:24.05:0,24,244	0/0:18,0:18:24.19:0,24,399	0/0:18,0:18:38.26:0,38,418	0/0:24,0:24:63.14:0,63,643	0/0:18,0:18:45.10:0,45,458	0/0:20,0:20:57.12:0,57,575	1/1:2,25:27:72.19:875,72,0	0/0:15,0:15:42.05:0,42,418	0/0:27,0:27:78.18:0,78,795	0/0:17,0:17:48.06:0,48,474	1/1:1,20:21:57.18:717,57,0	1/1:2,25:27:66.17:806,66,0	1/1:0,19:19:42.13:529,42,0	0/0:29,0:29:84.17:0,84,850	0/0:11,0:11:33.06:0,33,329	0/0:20,0:20:54.12:0,54,551	0/0:22,0:22:63.14:0,63,642	1/1:0,15:15:45.12:541,45,0	1/1:1,23:24:69.14:827,69,0	1/1:1,5:6:15.05:189,15,0	0/0:14,0:14:39.09:0,39,398	0/0:25,0:25:66.13:0,66,665	0/0:9,0:9:21.04:0,21,214	0/0:23,0:23:66.12:0,66,665	1/1:4,29:33:32.08:1033,32,0	1/1:3,21:25:66.21:827,66,0	1/1:0,8:8:21.07:264,21,0
chr10	8482111	.	TGG	T	12062.99	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-16.533;DP=633;FS=22.703;HRun=8;HaplotypeScore=102.6121;InbreedingCoeff=0.9992;MQ=84.21;MQ0=1;MQRankSum=-1.870;QD=30.69;ReadPosRankSum=0.487;VQSLOD=3.4341;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:29:65.38:0,65,244	0/0:0,0:9:22.46:0,22,79	0/0:25,0:25:59.12:0,59,829	0/0:19,0:19:33.22:0,33,601	0/0:2,0:30:67.82:0,68,248	0/0:2,0:23:49.78:0,50,175	0/0:7,0:25:44.92:0,45,158	1/1:7,28:35:81.19:951,81,0	1/1:2,31:32:75.23:915,75,0	1/1:1,24:25:72.23:878,72,0	1/1:4,16:20:51.15:617,51,0	1/1:3,27:30:78.24:951,78,0	1/1:1,29:30:75.24:915,75,0	1/1:1,30:31:84.26:1025,84,0	1/1:2,24:26:60.18:732,60,0	0/0:0,0:17:34.93:0,35,123	0/0:3,0:26:59.76:0,60,210	0/0:3,0:22:42.92:0,43,164	1/1:2,16:18:48.15:585,48,0	1/1:2,20:22:57.17:692,57,0	1/1:0,20:20:51.16:622,51,0	1/1:0,15:15:36.07:422,36,0	1/1:1,14:15:39.12:470,39,0	1/1:1,16:17:42.13:512,42,0	0/0:0,0:15:34.69:0,35,122	1/1:3,20:23:57.16:684,57,0	1/1:3,21:24:66.20:801,66,0	1/1:1,8:9:24.07:293,24,0
chr10	8483036	.	TTTTG	T	8919.16	PASS	AB=0.725;AC=20;AF=0.357;AN=56;BaseQRankSum=5.106;DP=836;FS=1.845;HRun=0;HaplotypeScore=158.8936;InbreedingCoeff=0.8442;MQ=61.27;MQ0=5;MQRankSum=-2.063;QD=26.78;ReadPosRankSum=2.648;VQSLOD=5.0643;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:95.69:0,96,2190	0/0:21,0:21:51.17:0,51,1146	0/0:17,0:15:18.06:0,18,417	0/0:22,0:19:27.09:0,27,580	0/0:27,0:27:60.16:0,60,1301	0/0:26,0:26:72.25:0,72,1614	0/0:38,0:38:90.26:0,90,1986	1/1:19,18:37:48.15:729,48,0	0/0:9,0:25:33.11:0,33,573	0/0:15,0:35:60.07:0,60,985	0/0:7,0:35:85.58:0,86,1362	1/1:4,19:23:51.17:824,51,0	1/1:11,39:49:96.32:1530,96,0	1/1:6,25:31:51.17:824,51,0	0/0:15,0:45:68.74:0,69,1177	0/0:38,0:38:99:0,99,2349	0/0:25,0:25:54.19:0,54,1264	0/1:24,3:27:45.79:46,0,960	1/1:13,14:26:42.10:621,42,0	1/1:8,28:36:81.23:1257,81,0	1/1:15,15:30:42.14:679,42,0	0/0:6,0:23:46.71:0,47,774	0/0:7,0:17:29.90:0,30,497	0/0:13,0:32:54.14:0,54,917	0/0:36,0:36:78.27:0,78,1815	0/1:4,27:33:17.91:1163,0,18	1/1:8,20:27:51.17:810,51,0	1/1:2,9:11:27.09:436,27,0
chr10	8483912	.	GA	G	7538.01	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=15.255;DP=612;FS=0.309;HRun=4;HaplotypeScore=59.7299;InbreedingCoeff=0.9610;MQ=69.89;MQ0=0;MQRankSum=0.316;QD=33.06;ReadPosRankSum=0.386;VQSLOD=5.2040;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:60.20:0,60,839	0/0:13,0:13:33.11:0,33,461	0/0:7,0:7:8.30:0,8,78	0/0:11,0:11:13.83:0,14,106	0/0:36,0:36:99:0,105,1435	0/0:25,0:25:69.21:0,69,935	0/0:15,0:15:45.14:0,45,614	1/1:2,32:34:96.24:1104,96,0	0/0:11,0:11:27.09:0,27,376	0/0:36,0:36:99:0,102,1393	0/0:32,0:32:93.31:0,93,1302	1/1:0,22:22:60.18:720,60,0	1/1:2,22:24:63.19:756,63,0	1/1:0,20:20:57.17:684,57,0	0/0:24,0:23:69.23:0,69,965	0/0:31,0:31:87.26:0,87,1197	0/0:25,0:25:69.23:0,69,965	0/0:16,0:16:45.13:0,45,612	1/1:0,15:15:45.14:539,45,0	1/1:1,25:26:75.23:897,75,0	1/1:0,19:19:57.17:684,57,0	0/0:28,0:28:81.25:0,81,1104	0/0:19,0:19:57.17:0,57,776	0/0:14,0:14:42.13:0,42,571	0/0:19,0:19:57.18:0,57,779	1/1:2,14:16:3.11:462,3,0	1/1:0,34:34:96.04:1152,96,0	1/1:2,16:18:45.14:540,45,0
chr10	8487711	.	G	GA	12720.22	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-17.099;DP=651;FS=1.372;HRun=5;HaplotypeScore=71.8814;InbreedingCoeff=0.9934;MQ=88.38;MQ0=0;MQRankSum=-3.230;QD=31.10;ReadPosRankSum=1.721;VQSLOD=5.5695;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:39.06:0,39,400	0/0:6,0:6:18.02:0,18,183	0/0:32,0:33:70.84:0,71,741	0/0:17,0:18:11.26:0,11,294	0/0:28,0:28:72.17:0,72,763	0/0:38,0:38:99:0,114,1188	0/0:14,0:14:36.05:0,36,363	1/1:7,35:42:99:1293,105,0	1/1:2,26:28:66.21:853,66,0	1/1:3,17:20:50.93:617,51,0	1/1:4,18:23:28.01:677,28,0	1/1:1,22:23:60.19:775,60,0	1/1:1,17:18:36.12:462,36,0	1/1:1,17:18:45.15:581,45,0	1/1:1,19:20:51.17:660,51,0	0/0:21,0:21:63.16:0,63,675	0/0:23,0:23:65.89:0,66,664	0/0:22,0:22:63.07:0,63,652	1/1:2,15:17:45.12:555,45,0	1/1:1,25:27:69.13:852,69,0	1/1:3,22:25:54.18:697,54,0	1/1:1,26:27:69.22:892,69,0	1/1:4,18:22:48.15:613,48,0	1/1:1,19:20:51.17:659,51,0	0/0:25,0:25:69.10:0,69,710	1/1:4,21:25:63.15:755,63,0	1/1:4,38:42:99:1352,105,0	1/1:1,11:12:33.11:427,33,0
chr10	8489195	.	TTGTG	T	6172.40	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=13.289;DP=865;FS=27.789;HRun=0;HaplotypeScore=143.2888;InbreedingCoeff=0.9997;MQ=61.25;MQ0=7;MQRankSum=1.442;QD=28.71;ReadPosRankSum=3.592;VQSLOD=2.5857;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:90.17:0,90,1914	0/0:21,0:21:54.18:0,54,1226	0/0:45,0:26:26.98:0,27,284	0/0:44,0:29:46.86:0,47,674	0/0:27,0:28:65.90:0,66,1399	0/0:25,0:25:60.16:0,60,1260	0/0:26,0:26:54.12:0,54,1078	0/0:41,0:40:95.07:0,95,1780	1/1:4,17:22:42.10:675,42,0	1/1:9,23:32:69.21:1105,69,0	1/1:8,18:26:50.96:704,51,0	0/0:32,0:35:86.48:0,86,1848	0/0:28,0:30:62.92:0,63,1292	0/0:26,0:26:69.22:0,69,1586	1/1:10,27:37:54.18:906,54,0	0/0:31,0:34:65.92:0,66,1357	0/0:24,0:26:59.61:0,60,1209	0/0:22,0:22:51:0,51,1044	0/0:18,0:17:44.31:0,44,858	0/0:33,0:37:89.45:0,89,1883	0/0:30,0:30:74.97:0,75,1735	1/1:7,31:38:89.82:1202,90,0	1/1:1,23:24:41.80:673,42,0	1/1:6,28:36:54.65:907,55,0	0/0:40,0:41:96.02:0,96,2070	0/0:30,0:34:97.82:0,98,2017	0/0:38,0:38:84.29:0,84,2008	0/0:9,0:10:29.82:0,30,631
chr10	8491535	.	G	GA	1265.03	PASS	AB=0.850;AC=20;AF=0.357;AN=56;BaseQRankSum=-2.365;DP=432;FS=19.003;HRun=14;HaplotypeScore=92.4975;InbreedingCoeff=0.3790;MQ=80.09;MQ0=2;MQRankSum=-0.119;QD=6.99;ReadPosRankSum=-2.885;VQSLOD=0.2497;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:17,4:23:10.05:0,10,177	0/0:6,0:6:11.77:0,12,75	0/0:41,0:27:16.03:0,16,108	0/0:30,1:16:4.13:0,4,29	0/1:11,0:11:0.28:0,0,122	0/0:4,0:4:8.86:0,9,58	0/1:17,2:19:7.10:7,0,207	0/1:13,14:27:0.81:330,0,1	0/0:11,0:11:3.31:0,3,14	0/0:24,0:24:3.16:0,3,13	0/0:14,0:14:8.35:0,8,31	1/1:7,2:9:5.95:87,6,0	1/1:1,2:3:6:53,6,0	0/1:3,4:7:8.83:44,0,9	0/0:30,0:30:1.11:0,1,3	0/0:4,0:5:2.50:0,2,7	0/0:9,0:12:25.68:0,26,159	0/0:15,0:15:28.54:0,29,179	1/1:2,10:13:32.99:287,33,0	1/1:6,12:18:16.72:264,17,0	0/1:2,5:9:9.90:53,0,10	0/1:23,0:23:5.40:5,0,44	0/1:15,0:15:5.54:16,0,6	0/0:22,0:22:8.31:0,8,44	0/0:11,0:11:10.44:0,10,76	1/1:8,7:16:9.59:198,10,0	1/1:4,3:8:11.80:86,12,0	0/1:3,0:3:0:0,0,0
chr10	8491548	.	AAC	A	626.23	PASS	AB=0.937;AC=8;AF=0.143;AN=56;BaseQRankSum=6.060;DP=405;FS=27.145;HRun=0;HaplotypeScore=83.3285;InbreedingCoeff=0.0530;MQ=75.97;MQ0=7;MQRankSum=-0.834;QD=4.93;ReadPosRankSum=2.349;VQSLOD=1.0040;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:56.95:0,57,798	0/0:4,0:4:12.03:0,12,172	0/0:50,0:26:30.49:0,30,561	0/0:36,0:15:8.01:0,8,151	0/0:11,0:11:30.56:0,31,467	0/0:5,0:5:15.02:0,15,203	0/0:17,0:17:50.33:0,50,771	0/0:20,0:20:60.14:0,60,798	0/1:11,0:11:26.20:70,0,26	0/1:21,1:22:6.41:148,0,6	0/1:11,1:12:37.17:75,0,37	0/0:6,0:6:17.93:0,18,212	0/0:3,0:3:9.01:0,9,100	0/0:7,0:7:9.03:0,9,125	1/1:27,1:28:5.86:104,6,0	0/0:3,0:3:3.04:0,3,72	0/0:11,0:11:27.01:0,27,409	0/0:14,0:13:32.94:0,33,551	0/0:14,0:14:39.08:0,39,466	0/0:14,0:14:35.71:0,36,393	0/0:8,0:8:5.80:0,6,157	0/1:17,1:18:36.24:126,0,36	0/1:14,2:16:28.90:141,0,29	0/1:18,2:20:33.63:97,0,34	0/0:11,0:11:22.94:0,23,293	0/0:15,0:15:22.64:0,23,437	0/0:6,0:6:15.49:0,15,174	0/0:2,0:2:2.96:0,3,19
chr10	8491549	.	AC	A	2128.19	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=0.456;DP=398;FS=22.943;HRun=2;HaplotypeScore=72.2970;InbreedingCoeff=0.8462;MQ=76.17;MQ0=7;MQRankSum=-3.070;QD=15.20;ReadPosRankSum=0.273;VQSLOD=2.0249;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:46.02:0,46,538	0/0:4,0:4:9.02:0,9,93	0/0:48,0:25:35.45:0,35,387	0/0:35,1:15:18.36:0,18,127	0/0:11,0:11:29.98:0,30,320	0/0:5,0:5:15.02:0,15,160	0/0:17,0:17:38.27:0,38,512	0/0:20,0:20:56.92:0,57,509	1/1:7,4:11:23.11:208,23,0	1/1:2,19:21:44.98:497,45,0	1/1:9,2:11:16.04:176,16,0	0/0:6,0:6:11.14:0,11,109	0/0:3,0:3:8.98:0,9,73	0/0:5,0:5:8.98:0,9,73	1/1:3,25:28:41.94:554,42,0	0/0:3,0:3:8.91:0,9,78	0/0:11,0:11:22.65:0,23,249	0/0:13,0:12:33.95:0,34,392	0/0:14,0:14:38.39:0,38,302	0/0:14,0:14:33.72:0,34,238	0/0:8,0:8:14.34:0,14,117	1/1:4,13:18:41.31:369,41,0	1/1:5,10:16:14.35:275,14,0	1/1:5,15:20:23.79:239,24,0	0/0:11,0:11:12.84:0,13,185	0/1:15,0:15:2.54:3,0,236	0/0:6,0:6:15.43:0,15,122	0/0:2,0:2:2.96:0,3,19
chr10	8491774	.	A	ACACACACG	4370.70	PASS	AB=1.000;AC=18;AF=0.321;AN=56;BaseQRankSum=0.970;DP=587;FS=9.712;HRun=0;HaplotypeScore=148.6629;InbreedingCoeff=0.6112;MQ=53.64;MQ0=13;MQRankSum=-5.789;QD=17.07;ReadPosRankSum=0.320;VQSLOD=3.2204;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:44.89:0,45,641	0/0:6,0:6:17.95:0,18,272	0/0:25,0:8:7.48:0,7,108	0/0:36,0:13:23.17:0,23,248	0/0:19,0:19:41.92:0,42,450	0/0:20,0:20:45.10:0,45,924	0/0:31,0:31:86.38:0,86,1394	0/0:19,0:18:28.98:0,29,331	1/1:2,14:18:21.54:744,22,0	1/1:6,15:28:34.79:648,35,0	1/1:20,1:22:17.75:384,18,0	0/1:27,0:27:46.77:47,0,159	0/0:16,0:16:9.78:0,10,105	0/1:22,0:22:31.99:32,0,164	1/1:8,25:37:42.14:1617,42,0	0/0:12,0:12:30.02:0,30,448	0/0:15,0:15:36.10:0,36,847	0/0:14,0:14:35.88:0,36,716	0/1:11,0:11:29.97:30,0,116	0/1:23,0:22:2.29:2,0,164	0/0:32,0:31:6.35:0,6,131	1/1:6,15:25:11.26:397,11,0	1/1:14,2:16:14.97:465,15,0	1/1:4,16:24:1.55:4,2,0	0/0:16,0:16:36.56:0,37,782	0/0:25,0:25:48.72:0,49,520	0/0:19,0:19:38.64:0,39,359	0/0:5,0:5:9:0,9,129
chr10	8491776	.	A	ACACACG	3494.38	PASS	AB=0.912;AC=14;AF=0.259;AN=54;BaseQRankSum=5.086;DP=585;FS=5.252;HRun=0;HaplotypeScore=132.8807;InbreedingCoeff=0.2376;MQ=53.33;MQ0=14;MQRankSum=-5.359;QD=13.29;ReadPosRankSum=3.160;VQSLOD=2.0421;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:47.92:0,48,610	0/0:6,0:6:17.95:0,18,253	0/0:25,0:8:8.45:0,8,109	0/0:37,0:13:26.14:0,26,269	0/0:18,0:18:41.92:0,42,437	0/0:21,0:21:44.72:0,45,816	0/0:31,0:31:86.70:0,87,1255	0/0:18,0:17:34.33:0,34,337	1/1:16,1:17:21.54:563,22,0	0/1:27,1:27:17.76:435,0,18	0/1:9,14:23:12.76:313,0,13	0/1:26,0:26:90.48:90,0,146	0/0:16,0:16:2.25:0,2,111	0/1:22,0:22:87.12:87,0,163	1/1:35,3:38:42.14:1213,42,0	0/0:10,0:10:30.02:0,30,409	0/0:15,0:15:36.10:0,36,719	0/0:14,0:14:33.09:0,33,615	0/1:10,0:10:33.48:33,0,113	0/1:22,0:21:13.98:14,0,151	0/1:34,0:33:1.90:2,0,132	1/1:26,0:25:11.79:284,12,0	0/1:10,6:17:6.95:459,0,7	./.	0/0:16,0:16:39.56:0,40,701	0/0:26,0:25:54.49:0,54,517	0/0:19,0:19:37.27:0,37,285	0/0:4,0:4:8.68:0,9,104
chr10	8492767	.	A	AAC	1821.73	PASS	AB=0.898;AC=27;AF=0.540;AN=50;BaseQRankSum=-3.979;DP=607;FS=65.193;HRun=0;HaplotypeScore=114.5119;InbreedingCoeff=-0.2563;MQ=64.86;MQ0=29;MQRankSum=-0.237;QD=3.91;ReadPosRankSum=5.773;VQSLOD=-0.6222;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:41,0:41:13.62:174,14,0	1/1:6,0:6:8.99:87,9,0	./.	./.	0/1:19,1:20:15.94:79,0,16	0/1:34,6:38:17.34:38,0,17	0/1:13,1:14:46.86:80,0,47	./.	0/1:27,0:27:9.93:10,0,63	0/1:18,0:17:12.70:49,0,13	1/1:20,1:21:5.89:59,6,0	0/1:13,0:12:14.96:15,0,39	0/1:12,0:12:5.70:6,0,93	0/0:20,0:20:8.89:0,9,63	0/1:17,5:22:29.36:35,0,29	1/1:19,5:22:4.07:88,4,0	0/1:9,7:17:11.53:182,0,12	0/1:13,6:17:11.28:116,0,11	0/0:18,0:16:2.86:0,3,25	0/1:19,1:29:10.68:65,0,11	0/1:17,0:16:8.56:74,0,9	1/1:18,0:18:7.05:142,7,0	1/1:24,0:20:23.99:294,24,0	0/1:30,2:30:85.03:249,0,85	0/1:16,1:21:7.69:84,0,8	0/1:28,0:27:49.12:49,0,70	0/0:18,0:17:14.07:0,14,96	0/0:8,0:6:6:0,6,54
chr10	8493162	.	CA	C	13132.97	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=14.712;DP=727;FS=7.790;HRun=6;HaplotypeScore=71.5997;InbreedingCoeff=0.9987;MQ=81.36;MQ0=0;MQRankSum=-3.650;QD=28.80;ReadPosRankSum=1.408;VQSLOD=5.5035;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:75.21:0,75,956	0/0:13,0:13:39.13:0,39,513	0/0:12,0:12:21.06:0,21,258	0/0:25,0:25:56.73:0,57,654	0/0:47,0:47:99:0,135,1749	0/0:41,0:41:99:0,108,1421	0/0:16,0:16:45.13:0,45,578	1/1:5,25:30:75.17:797,75,0	1/1:0,24:24:63.16:677,63,0	1/1:4,25:29:75.15:789,75,0	1/1:3,23:26:66.16:709,66,0	1/1:1,20:21:57.14:613,57,0	1/1:3,26:29:72.18:774,72,0	1/1:0,31:31:90.23:967,90,0	1/1:3,22:25:63.16:677,63,0	0/0:31,0:31:78.23:0,78,996	0/0:18,0:18:48.13:0,48,614	0/0:11,0:11:27.07:0,27,334	1/1:2,22:24:66.11:683,66,0	1/1:2,38:40:99:1224,114,0	1/1:0,24:24:63.16:677,63,0	1/1:2,33:35:96.24:1032,96,0	1/1:1,27:28:78.19:838,78,0	1/1:1,15:16:42.11:451,42,0	0/0:31,0:31:84.26:0,84,1092	1/1:0,32:32:93.23:1000,93,0	1/1:2,33:35:93.23:999,93,0	1/1:0,7:7:21.05:226,21,0
chr10	8495911	.	G	GCA	9199.09	PASS	AB=0.590;AC=19;AF=0.339;AN=56;BaseQRankSum=-13.619;DP=778;FS=4.297;HRun=0;HaplotypeScore=95.5655;InbreedingCoeff=0.9413;MQ=62.38;MQ0=6;MQRankSum=-1.681;QD=32.51;ReadPosRankSum=1.449;VQSLOD=6.9993;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,120,1500	0/0:11,0:11:27.09:0,27,338	0/0:37,0:16:16.27:0,16,200	0/0:37,0:14:12.40:0,12,144	0/0:29,0:29:75.21:0,75,922	0/0:20,0:20:45.13:0,45,550	0/0:30,0:30:81.23:0,81,987	1/1:6,17:22:51.17:836,51,0	0/0:29,0:29:69.22:0,69,862	0/0:32,0:32:75.24:0,75,938	0/0:22,0:22:48.15:0,48,601	1/1:5,27:32:25.70:953,26,0	0/1:11,25:35:2.83:1006,0,3	1/1:11,21:31:72.25:1180,72,0	0/0:22,0:22:57.18:0,57,713	0/0:30,0:30:63.20:0,63,788	0/0:17,0:17:39.12:0,39,488	0/0:22,0:23:60.02:0,60,727	1/1:8,10:17:33.11:535,33,0	1/1:7,15:22:36.12:594,36,0	1/1:6,43:48:55.84:1449,56,0	0/0:27,0:28:78.08:0,78,952	0/0:25,0:25:63.20:0,63,788	0/0:39,0:39:84.27:0,84,1050	0/0:16,0:16:39.12:0,39,488	1/1:5,29:34:52.75:1375,53,0	1/1:4,21:26:54.18:891,54,0	1/1:1,9:11:24.08:381,24,0
chr10	8496010	.	GGAGA	G	13605.17	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=14.602;DP=687;FS=0.670;HRun=0;HaplotypeScore=145.7966;InbreedingCoeff=0.9966;MQ=69.14;MQ0=4;MQRankSum=-5.278;QD=36.77;ReadPosRankSum=1.126;VQSLOD=5.0700;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:45:99:0,126,3085	0/0:14,0:15:35.91:0,36,842	0/0:33,0:23:22.71:0,23,795	0/0:56,0:39:45.96:0,46,902	0/0:26,0:26:63.20:0,63,1538	0/0:23,0:23:57.20:0,57,1462	0/0:33,0:33:84.28:0,84,2079	1/1:5,23:28:66.18:1044,66,0	1/1:7,22:28:44.64:752,45,0	1/1:4,17:21:53.94:875,54,0	1/1:4,7:11:14.99:267,15,0	1/1:5,23:28:75.21:1292,75,0	1/1:5,14:19:51.16:866,51,0	1/1:2,28:30:71.91:1238,72,0	1/1:1,24:24:54.18:944,54,0	0/0:32,1:33:39.91:0,40,2178	0/0:15,0:15:42.13:0,42,1029	0/0:18,0:18:48.16:0,48,1191	1/1:10,6:16:24.07:395,24,0	1/1:3,10:13:27.09:464,27,0	1/1:10,14:24:27.06:474,27,0	1/1:4,17:21:45.15:796,45,0	1/1:4,15:19:35.83:636,36,0	1/1:3,29:32:63.16:1088,63,0	0/0:18,0:18:45.14:0,45,1075	1/1:2,23:25:66.23:1147,66,0	1/1:5,12:17:45.14:755,45,0	1/1:2,10:12:33.11:572,33,0
chr10	8500037	.	C	CA	16787.08	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=-16.903;DP=760;FS=0.898;HRun=4;HaplotypeScore=66.9952;InbreedingCoeff=1.0000;MQ=88.81;MQ0=0;MQRankSum=-5.745;QD=35.49;ReadPosRankSum=2.505;VQSLOD=5.3589;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:72.21:0,72,816	0/0:15,0:15:45.13:0,45,510	0/0:22,0:22:48.19:0,48,558	0/0:33,1:34:66.07:0,66,920	0/0:31,0:31:87.22:0,87,965	0/0:27,0:27:75.20:0,75,841	0/0:17,0:17:48.12:0,48,534	1/1:3,36:39:99:1440,108,0	0/0:19,0:19:57.16:0,57,646	1/1:2,34:36:99:1322,99,0	1/1:0,30:30:84.15:1103,84,0	1/1:4,33:37:84.28:1149,84,0	1/1:1,26:27:78.26:1066,78,0	1/1:0,29:29:78.26:1066,78,0	1/1:7,34:41:93.31:1272,93,0	0/0:30,0:30:75.17:0,75,824	0/0:18,0:18:54.15:0,54,612	0/0:14,0:14:42.10:0,42,465	1/1:1,18:19:54.15:705,54,0	1/1:0,32:32:81.23:1086,81,0	1/1:0,18:18:51.17:697,51,0	1/1:2,28:30:78.26:1066,78,0	1/1:2,30:32:84.28:1146,84,0	1/1:2,22:24:60.20:820,60,0	0/0:33,0:33:93.22:0,93,1031	1/1:5,22:27:66.21:879,66,0	1/1:3,37:39:99:1476,108,0	1/1:0,12:12:36.12:492,36,0
chr10	8500411	.	GCTCCTTAAAAAA	G	24804.13	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=16.283;DP=591;FS=3.617;HRun=0;HaplotypeScore=231.3262;InbreedingCoeff=0.9824;MQ=73.73;MQ0=0;MQRankSum=-16.232;QD=68.33;ReadPosRankSum=2.726;VQSLOD=4.7368;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:57.20:0,57,3348	0/0:10,0:10:27.09:0,27,1604	0/0:16,0:16:39.13:0,39,2217	0/0:17,0:17:38.94:0,39,1946	0/0:30,0:30:81.26:0,81,4581	0/0:28,0:28:78.27:0,78,4253	0/0:15,0:15:39.13:0,39,2090	1/1:14,21:35:60.12:1748,60,0	1/1:5,11:16:33.11:1188,33,0	1/1:6,13:19:42.13:1305,42,0	1/1:4,21:25:48.16:1724,48,0	1/1:3,23:26:59.95:2159,60,0	1/1:5,19:24:51.17:1835,51,0	1/1:3,16:19:42.14:1511,42,0	1/1:9,16:25:33.11:1187,33,0	0/0:27,0:27:75.25:0,75,4168	0/0:29,0:29:78.27:0,78,4555	0/0:9,0:9:24.08:0,24,1418	1/1:7,5:12:18.06:578,18,0	1/1:4,27:31:78.27:2806,78,0	1/1:5,5:10:6.02:216,6,0	1/1:3,20:23:45.15:1619,45,0	1/1:10,12:22:30.10:1079,30,0	1/1:4,10:14:20.81:755,21,0	0/0:26,0:26:57.20:0,57,3034	1/1:9,27:36:81.22:2827,81,0	1/1:4,14:18:39.13:1403,39,0	1/1:0,8:8:24.08:864,24,0
chr10	8500440	.	ACTCAACAATAGC	A	1581.56	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.162;DP=624;FS=2.257;HRun=0;HaplotypeScore=326.4909;InbreedingCoeff=0.9905;MQ=81.43;MQ0=0;MQRankSum=-5.399;QD=105.44;ReadPosRankSum=2.325;VQSLOD=3.0700;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:87.26:0,87,4954	0/0:7,0:7:21.07:0,21,1113	0/0:22,0:22:56.33:0,56,2370	0/0:24,0:24:62.95:0,63,3317	0/0:29,0:29:87.28:0,87,4696	0/0:25,0:25:69.21:0,69,3892	0/0:16,0:16:45.12:0,45,2434	0/0:29,0:29:87.26:0,87,4493	1/1:1,14:15:45.15:1676,45,0	0/0:18,0:18:54.18:0,54,3068	0/0:24,0:24:63.21:0,63,3211	0/0:31,0:31:81.23:0,81,3799	0/0:26,0:26:75.26:0,75,4424	0/0:24,0:24:69.24:0,69,3898	0/0:27,0:27:69.24:0,69,4059	0/0:28,0:28:81.28:0,81,4963	0/0:28,0:28:81.24:0,81,4547	0/0:7,0:7:21.07:0,21,1188	0/0:18,0:18:54.19:0,54,3120	0/0:39,0:39:99:0,117,6306	0/0:12,0:12:27.05:0,27,1281	0/0:24,0:24:69.15:0,69,3424	0/0:17,0:17:45.10:0,45,2132	0/0:20,0:20:50.71:0,51,2465	0/0:20,0:20:60.21:0,60,3499	0/0:30,0:30:90.09:0,90,4256	0/0:24,0:23:69.24:0,69,3872	0/0:10,0:10:30.10:0,30,1671
chr10	8500664	.	GGCAC	G	18314.23	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=18.030;DP=675;FS=0.300;HRun=0;HaplotypeScore=128.3006;InbreedingCoeff=0.9998;MQ=79.40;MQ0=0;MQRankSum=-10.975;QD=46.48;ReadPosRankSum=2.662;VQSLOD=5.6041;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,120,3078	0/0:13,0:13:39.13:0,39,1017	0/0:19,0:19:27.83:0,28,1028	0/0:21,0:21:63.18:0,63,1499	0/0:21,0:21:57.20:0,57,1496	0/0:20,0:20:60.21:0,60,1558	0/0:32,0:32:84.27:0,84,2153	1/1:9,20:29:60.19:1087,60,0	1/1:3,18:21:51.17:952,51,0	1/1:1,25:26:75.25:1370,75,0	1/1:2,16:18:48.16:892,48,0	1/1:3,28:31:81.28:1509,81,0	1/1:1,24:25:66.23:1231,66,0	1/1:1,26:27:72.25:1343,72,0	1/1:2,28:30:81.28:1511,81,0	0/0:32,0:32:90.31:0,90,2320	0/0:34,0:34:99:0,102,2719	0/0:15,0:15:42.14:0,42,1119	1/1:1,13:14:39.13:727,39,0	1/1:1,17:18:45.15:840,45,0	1/1:4,31:35:66.23:1232,66,0	1/1:1,14:15:39.13:728,39,0	1/1:0,17:17:42.14:783,42,0	1/1:1,25:26:60.20:1120,60,0	0/0:32,0:32:90.31:0,90,2375	1/1:0,24:24:72.23:1310,72,0	1/1:1,22:23:57.20:1063,57,0	1/1:0,15:15:33.11:616,33,0
chr10	8501743	.	A	AGCATGATGAT	53013.94	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-11.620;DP=806;FS=5.700;HRun=0;HaplotypeScore=189.8805;InbreedingCoeff=0.9870;MQ=87.05;MQ0=0;MQRankSum=-19.297;QD=105.61;ReadPosRankSum=0.295;VQSLOD=4.7898;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:90.26:0,90,2706	0/0:5,0:5:15.05:0,15,441	0/0:33,0:33:93.02:0,93,2801	0/0:37,0:37:95.45:0,95,3053	0/0:36,0:36:99:0,105,3156	0/0:35,0:35:99:0,105,3481	0/0:19,0:19:57.18:0,57,1880	1/1:15,6:39:99:4453,108,0	1/1:4,12:24:45.15:2341,45,0	1/1:2,19:34:87.29:4109,87,0	1/1:12,12:29:48.16:2586,48,0	1/1:9,21:40:81.28:4378,81,0	1/1:10,31:53:99:5826,108,0	1/1:4,17:30:57.20:3038,57,0	1/1:4,18:30:57.20:3084,57,0	0/0:34,0:34:99:0,102,3189	0/0:26,0:26:78.25:0,78,2554	0/0:13,0:13:36.08:0,36,1077	1/1:6,5:17:51.13:1900,51,0	1/1:9,15:31:57.20:2984,57,0	1/1:4,3:12:15.05:819,15,0	1/1:5,20:33:66.23:3550,66,0	1/1:5,19:29:66.23:3539,66,0	1/1:4,12:22:26.93:1371,27,0	0/0:36,0:36:99:0,108,3612	1/1:4,14:25:69.18:3228,69,0	1/1:5,27:39:99:5316,99,0	1/1:2,3:13:9.03:493,9,0
chr10	8503147	.	CAA	C	5436.44	PASS	AB=0.603;AC=31;AF=0.554;AN=56;BaseQRankSum=7.456;DP=563;FS=3.876;HRun=15;HaplotypeScore=80.7004;InbreedingCoeff=0.7768;MQ=74.92;MQ0=2;MQRankSum=-1.536;QD=16.37;ReadPosRankSum=6.205;VQSLOD=4.2538;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:25:54.14:0,54,687	0/0:7,0:9:18.05:0,18,220	0/0:14,0:12:14.88:0,15,169	0/0:21,0:18:11.47:0,11,111	0/0:21,0:23:39.48:0,39,471	0/0:21,0:26:65.15:0,65,779	0/0:22,0:26:55.02:0,55,572	1/1:9,19:28:53.77:470,54,0	0/1:3,1:11:28.95:29,0,40	1/1:2,15:17:41.88:370,42,0	1/1:4,16:22:29.58:308,30,0	1/1:2,15:21:43.91:338,44,0	1/1:6,11:17:35.58:302,36,0	1/1:4,13:18:38.58:329,39,0	1/1:4,17:22:38.79:388,39,0	0/0:16,0:19:43.56:0,44,508	0/0:30,0:30:66.05:0,66,788	0/0:15,0:20:42.01:0,42,480	1/1:1,4:7:17.48:129,17,0	1/1:10,18:29:50.42:434,50,0	1/1:7,7:14:17.92:158,18,0	1/1:6,16:24:41.43:399,41,0	0/1:8,15:23:11.59:354,0,12	0/1:6,6:15:48.49:175,0,48	0/0:14,0:16:32.54:0,33,354	1/1:4,11:16:26.47:267,26,0	1/1:5,26:34:80.14:669,80,0	1/1:1,13:14:35.90:317,36,0
chr10	8503416	.	CT	C	321.88	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-0.173;DP=602;FS=5.325;HRun=10;HaplotypeScore=98.6739;InbreedingCoeff=0.9733;MQ=70.59;MQ0=1;MQRankSum=-0.043;QD=16.09;ReadPosRankSum=0.604;VQSLOD=3.8162;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:51.12:0,51,553	0/0:6,0:6:15.04:0,15,166	0/0:21,0:17:27.03:0,27,285	0/0:13,1:13:21.04:0,21,218	0/0:30,0:30:83.22:0,83,914	0/0:31,0:31:87.19:0,87,937	0/0:15,0:15:39.11:0,39,431	0/0:35,0:35:62.82:0,63,701	1/1:1,19:20:47.99:417,48,0	0/0:6,0:22:46.26:0,46,250	0/0:7,0:27:57.42:0,57,324	0/0:15,0:15:39.11:0,39,429	0/0:20,0:20:48.10:0,48,510	0/0:22,0:22:38.63:0,39,485	0/0:6,0:22:24.52:0,25,143	0/0:26,0:27:65.50:0,65,687	0/0:22,0:22:57.13:0,57,621	0/0:18,0:18:45.12:0,45,497	0/0:30,0:30:78.13:0,78,826	0/0:31,0:32:83.68:0,84,842	0/0:16,0:16:48.05:0,48,497	0/0:4,0:14:37.11:0,37,210	0/0:4,0:17:26.04:0,26,132	0/0:7,0:16:24.51:0,25,176	0/0:10,0:10:26.97:0,27,281	0/0:21,0:22:34.30:0,34,424	0/0:30,0:30:81.16:0,81,863	0/0:23,0:23:38.44:0,38,540
chr10	8504574	.	C	CAA	4671.09	PASS	AB=0.672;AC=30;AF=0.536;AN=56;BaseQRankSum=-1.303;DP=634;FS=10.923;HRun=13;HaplotypeScore=104.4363;InbreedingCoeff=0.5717;MQ=72.27;MQ0=1;MQRankSum=-0.698;QD=12.07;ReadPosRankSum=-3.602;VQSLOD=1.9213;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:40:28.04:0,28,557	0/0:10,0:10:11.88:0,12,105	0/0:27,0:21:13.49:0,13,74	0/0:16,0:11:2.41:0,2,8	0/0:24,0:27:56.25:0,56,513	0/1:18,0:23:4.14:4,0,256	0/0:22,0:22:47.91:0,48,423	0/1:9,2:23:5.51:138,0,6	1/1:8,0:25:23.99:226,24,0	1/1:9,15:25:41.53:481,42,0	1/1:4,11:17:38.88:412,39,0	1/1:3,17:23:32.42:365,32,0	1/1:9,15:24:24.08:323,24,0	1/1:5,10:17:18:207,18,0	1/1:8,20:30:38.59:479,39,0	0/0:25,0:32:64.89:0,65,577	0/0:26,0:27:14.71:0,15,359	0/0:19,0:20:41.48:0,41,355	1/1:7,6:16:23.04:235,23,0	1/1:11,16:31:53.37:538,53,0	1/1:6,1:12:11.52:109,12,0	1/1:4,12:18:35.46:384,35,0	1/1:9,15:27:33.74:378,34,0	0/1:10,11:22:28.76:208,0,29	0/0:23,0:24:29.79:0,30,241	0/1:9,1:21:44.21:115,0,44	0/1:9,0:22:36.01:36,0,78	0/1:3,0:11:8.46:34,0,8
chr10	8505612	.	GC	G	917.63	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.063;DP=727;FS=7.768;HRun=2;HaplotypeScore=100.8806;InbreedingCoeff=0.9835;MQ=74.87;MQ0=1;MQRankSum=-3.074;QD=33.99;ReadPosRankSum=1.300;VQSLOD=3.2876;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:96.31:0,96,1418	0/0:5,0:5:15.05:0,15,223	0/0:19,0:19:45.49:0,45,579	0/0:15,0:14:30.10:0,30,441	0/0:30,0:30:90.29:0,90,1326	0/0:28,0:28:84.27:0,84,1239	0/0:29,0:29:87.29:0,87,1301	0/0:30,0:30:81.27:0,81,1214	1/1:0,27:27:78.25:1013,78,0	0/0:24,0:24:69.23:0,69,1017	0/0:20,0:20:57.19:0,57,854	0/0:24,0:24:69.22:0,69,1002	0/0:41,0:40:99:0,120,1756	0/0:32,0:32:96.30:0,96,1401	0/0:31,0:31:90.30:0,90,1346	0/0:29,1:30:48.32:0,48,1200	0/0:33,0:33:99:0,99,1455	0/0:32,0:32:96.22:0,96,1350	0/0:18,0:18:51.16:0,51,745	0/0:43,0:43:99:0,129,1929	0/0:26,0:26:75.24:0,75,1101	0/0:17,0:17:51.17:0,51,764	0/0:30,0:30:84.27:0,84,1238	0/0:22,0:22:66.22:0,66,989	0/0:29,0:29:87.29:0,87,1286	0/0:33,0:33:99:0,99,1463	0/0:17,0:17:48.16:0,48,717	0/0:10,0:10:30.08:0,30,427
chr10	8506347	.	ATGTGTG	A	1909.73	PASS	AB=1.000;AC=19;AF=0.365;AN=52;BaseQRankSum=5.330;DP=811;FS=13.179;HRun=0;HaplotypeScore=184.2218;InbreedingCoeff=0.8265;MQ=60.46;MQ0=8;MQRankSum=-7.543;QD=6.56;ReadPosRankSum=-0.817;VQSLOD=1.9004;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:40:54.14:0,54,1165	0/0:13,0:13:21.02:0,21,335	./.	./.	0/0:18,0:18:36.12:0,36,830	0/0:26,0:28:33.10:0,33,809	0/0:30,0:32:36.52:0,37,793	0/0:35,0:35:2.94:0,3,18	1/1:14,0:26:23.37:297,23,0	0/0:23,0:23:42.14:0,42,1137	0/0:18,0:19:24.06:0,24,568	1/1:18,19:38:21.07:367,21,0	1/1:14,13:28:14.91:215,15,0	1/1:18,13:32:8.41:138,8,0	0/0:24,0:35:25.57:0,26,285	0/0:35,0:41:61.46:0,61,1639	0/0:24,0:24:30.10:0,30,690	0/0:14,0:22:21.06:0,21,303	1/1:14,3:17:6.02:121,6,0	1/1:27,9:35:12.04:193,12,0	0/1:44,0:44:11.67:97,0,12	0/0:28,0:31:11.83:0,12,202	0/0:24,1:32:21.03:0,21,238	0/0:20,0:34:28.37:0,28,405	0/0:23,0:23:21.07:0,21,584	1/1:32,5:37:10.73:164,11,0	1/1:12,10:23:26.92:434,27,0	1/1:7,3:10:5.97:79,6,0
chr10	8509206	.	CT	C	10156.07	PASS	AB=0.920;AC=35;AF=0.625;AN=56;BaseQRankSum=13.507;DP=662;FS=18.075;HRun=9;HaplotypeScore=74.2454;InbreedingCoeff=0.9345;MQ=74.48;MQ0=0;MQRankSum=-3.018;QD=21.84;ReadPosRankSum=2.249;VQSLOD=3.8298;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:45.11:0,45,506	0/0:5,0:5:15.04:0,15,173	0/1:21,2:23:6.80:7,0,392	0/0:15,0:14:31.33:0,31,340	0/0:30,0:30:81.24:0,81,935	0/0:35,0:35:93.28:0,93,1073	0/0:18,0:18:45.12:0,45,509	1/1:5,35:40:99:956,105,0	1/1:3,11:14:36.02:328,36,0	1/1:3,24:27:71.99:652,72,0	1/1:2,21:23:54.02:494,54,0	1/1:4,29:33:75.04:686,75,0	1/1:2,23:25:63.03:577,63,0	1/1:2,30:32:84.04:769,84,0	1/1:2,30:32:84.04:769,84,0	0/0:19,0:20:56.98:0,57,625	0/0:18,0:18:51.11:0,51,574	0/0:19,0:19:51.15:0,51,589	1/1:4,15:19:45.01:408,45,0	1/1:3,26:29:72.02:658,72,0	1/1:1,11:12:24.01:220,24,0	1/1:3,22:25:66.03:603,66,0	1/1:1,28:29:78.04:714,78,0	1/1:1,20:21:53.95:484,54,0	0/0:18,0:20:56.82:0,57,608	1/1:3,21:24:63.03:577,63,0	1/1:4,31:35:49.44:707,49,0	1/1:2,20:22:60.02:549,60,0
chr10	8511004	.	A	AC	1411.17	PASS	AB=0.737;AC=24;AF=0.429;AN=56;BaseQRankSum=-2.749;DP=430;FS=6.522;HRun=10;HaplotypeScore=55.6219;InbreedingCoeff=0.2591;MQ=77.21;MQ0=0;MQRankSum=-1.247;QD=6.30;ReadPosRankSum=-4.833;VQSLOD=0.1215;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,8:11:6.01:64,6,0	1/1:3,0:3:2.97:20,3,0	0/0:16,0:15:5.37:0,5,122	0/0:21,0:21:19.52:0,20,216	0/1:10,8:19:79.88:80,0,98	0/1:8,5:13:17.32:54,0,17	0/1:21,12:33:35.03:456,0,35	0/1:13,2:15:12.89:51,0,13	0/0:17,0:18:13.42:0,13,222	0/0:18,0:18:20.68:0,21,158	0/0:14,0:17:21.76:0,22,158	1/1:9,2:11:21.90:196,22,0	1/1:11,0:12:17.80:154,18,0	1/1:4,0:10:1.25:3,1,0	0/0:22,0:24:47.99:0,48,356	0/1:10,17:27:73.93:105,0,74	0/1:8,15:23:14.99:15,0,87	0/0:3,8:12:2.97:0,3,25	1/1:8,0:9:4.40:45,4,0	1/1:10,0:10:12.60:104,13,0	1/1:2,9:11:9.02:96,9,0	0/0:15,0:16:26.91:0,27,174	0/0:16,0:19:46.35:0,46,341	0/0:20,0:24:53.88:0,54,396	0/1:6,1:8:38.13:68,0,38	0/1:6,3:9:12.62:84,0,13	0/0:18,0:19:13.72:0,14,229	0/0:2,0:2:5.21:0,5,31
chr10	8514163	.	AG	A	2004.40	PASS	AC=18;AF=0.391;AN=46;BaseQRankSum=-1.174;DP=452;FS=0.000;HRun=1;HaplotypeScore=40.8665;InbreedingCoeff=0.8444;MQ=23.39;MQ0=228;MQRankSum=-0.289;QD=11.01;ReadPosRankSum=-1.747;VQSLOD=0.9001;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:6:9.03:0,9,143	0/0:4,0:4:9.03:0,9,143	./.	./.	0/0:21,0:13:9.03:0,9,131	0/0:18,0:9:12.04:0,12,191	0/0:13,0:4:9.03:0,9,143	1/1:2,15:6:15.05:209,15,0	1/1:1,15:8:12.04:167,12,0	0/0:19,0:8:21.07:0,21,333	0/0:7,0:7:6.02:0,6,95	1/1:2,24:10:6.02:84,6,0	1/1:1,23:11:12.04:167,12,0	1/1:0,25:15:12.04:167,12,0	0/0:29,0:18:18.06:0,18,286	0/0:22,0:13:20.99:0,21,324	0/0:12,0:6:9.03:0,9,143	0/0:7,0:3:9.03:0,9,143	1/1:0,18:6:15.05:208,15,0	1/1:2,9:8:17.92:203,18,0	./.	0/0:17,0:10:6.02:0,6,83	0/0:12,0:12:8.78:0,9,143	./.	0/0:17,0:14:29.80:0,30,475	1/1:0,24:16:48.03:606,48,0	1/1:2,19:14:26.63:376,27,0	./.
chr10	8516962	.	CG	C	11077.27	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=14.024;DP=686;FS=0.957;HRun=6;HaplotypeScore=73.6497;InbreedingCoeff=0.9992;MQ=91.22;MQ0=0;MQRankSum=-2.555;QD=26.89;ReadPosRankSum=2.100;VQSLOD=5.3475;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:74.81:0,75,939	0/0:14,0:14:42.11:0,42,533	0/0:28,0:28:72.20:0,72,901	0/0:27,0:27:69.18:0,69,879	0/0:34,0:34:93.28:0,93,1191	0/0:38,0:38:99:0,108,1393	0/0:21,0:21:54.18:0,54,710	1/1:2,21:23:63.14:669,63,0	1/1:3,14:17:39.10:419,39,0	1/1:3,15:18:45.07:471,45,0	1/1:2,17:19:42.10:450,42,0	1/1:0,26:26:75.19:806,75,0	1/1:0,36:36:93.23:999,93,0	1/1:1,21:22:60.15:645,60,0	1/1:4,36:40:96.24:1032,96,0	0/0:30,0:30:90.28:0,90,1171	0/0:21,0:21:57.14:0,57,730	0/0:12,0:12:27.07:0,27,341	1/1:5,15:20:44.78:462,45,0	1/1:1,29:30:75.18:806,75,0	1/1:1,34:35:87.22:935,87,0	1/1:1,22:23:54.14:580,54,0	1/1:0,27:27:66.17:708,66,0	1/1:0,18:18:51.13:548,51,0	0/0:22,0:22:66.19:0,66,839	1/1:2,18:20:54.06:550,54,0	1/1:1,30:31:72.18:773,72,0	1/1:0,7:7:21.05:226,21,0
chr10	8517317	.	A	ATG	22402.41	PASS	AB=0.947;AC=35;AF=0.625;AN=56;BaseQRankSum=18.652;DP=766;FS=4.459;HRun=0;HaplotypeScore=130.1108;InbreedingCoeff=0.9443;MQ=93.95;MQ0=0;MQRankSum=-6.258;QD=47.36;ReadPosRankSum=4.480;VQSLOD=5.4013;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,99,1490	0/0:9,0:9:27.08:0,27,392	0/0:36,0:36:99:0,102,1491	0/0:32,0:32:90.01:0,90,1191	0/0:30,0:30:87.21:0,87,1222	0/0:36,0:36:99:0,108,1558	0/0:21,0:21:57.17:0,57,823	1/1:2,33:36:99:1772,105,0	1/1:2,19:21:57.20:1100,57,0	1/1:1,30:31:90.21:1653,90,0	1/1:1,26:28:75.26:1436,75,0	1/1:1,33:34:90.31:1734,90,0	1/1:1,28:31:84.29:1621,84,0	1/1:1,26:28:66.23:1273,66,0	1/1:0,29:29:75.26:1447,75,0	0/1:17,1:18:3.74:4,0,726	0/0:42,0:42:99:0,126,1859	0/0:27,0:27:75.21:0,75,1122	1/1:1,15:17:47.97:766,48,0	1/1:1,30:31:81.28:1564,81,0	1/1:1,23:24:63.22:1208,63,0	1/1:2,26:28:78.27:1496,78,0	1/1:2,30:32:75.26:1443,75,0	1/1:1,22:23:51.17:985,51,0	0/0:24,0:24:72.22:0,72,1059	1/1:4,26:30:78.15:1396,78,0	1/1:1,25:26:63.22:1215,63,0	1/1:0,6:6:15.05:290,15,0
chr10	8518018	.	TATTC	T	12943.49	PASS	AB=0.929;AC=35;AF=0.625;AN=56;BaseQRankSum=14.884;DP=693;FS=15.816;HRun=0;HaplotypeScore=115.8388;InbreedingCoeff=0.8966;MQ=69.80;MQ0=1;MQRankSum=0.957;QD=29.02;ReadPosRankSum=1.500;VQSLOD=3.6686;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:87.23:0,87,1965	0/1:12,1:13:25.65:26,0,490	0/0:16,0:12:17.81:0,18,301	0/0:17,0:17:18.04:0,18,271	0/0:32,0:32:60.19:0,60,1407	0/0:30,0:30:78.20:0,78,1595	0/0:19,0:19:36.09:0,36,761	1/1:14,27:41:78.17:1181,78,0	1/1:8,19:27:54.18:895,54,0	1/1:9,16:25:54.08:835,54,0	1/1:6,25:31:68.89:1001,69,0	1/1:7,30:37:72.25:1193,72,0	1/1:7,19:26:39.13:646,39,0	1/1:5,16:21:42.14:696,42,0	1/1:9,32:41:78.27:1293,78,0	0/0:26,0:26:63.19:0,63,1405	0/0:23,0:23:60.19:0,60,1377	0/0:28,0:28:60.21:0,60,1418	1/1:12,11:23:33.02:495,33,0	1/1:6,19:25:50.87:742,51,0	1/1:5,15:20:30.10:497,30,0	1/1:5,14:19:39.05:614,39,0	1/1:1,16:18:42.03:673,42,0	1/1:3,18:21:36.12:597,36,0	0/0:24,0:24:54.19:0,54,1296	1/1:12,19:31:56.90:816,57,0	1/1:6,18:24:42.04:694,42,0	1/1:0,3:3:3.01:50,3,0
chr10	8520379	.	T	TA	804.33	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-5.515;DP=671;FS=8.907;HRun=1;HaplotypeScore=71.5146;InbreedingCoeff=0.9905;MQ=83.22;MQ0=0;MQRankSum=-0.391;QD=36.56;ReadPosRankSum=0.477;VQSLOD=3.5002;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:72.22:0,72,920	0/0:14,0:14:42.14:0,42,545	0/0:26,0:27:59.99:0,60,728	0/0:15,0:15:25.61:0,26,314	0/0:24,0:24:69.22:0,69,896	0/0:23,0:23:69.21:0,69,883	0/0:12,0:12:36.09:0,36,439	0/0:30,0:30:84.27:0,84,1091	1/1:0,22:22:60.20:899,60,0	0/0:31,0:31:90.28:0,90,1154	0/0:19,0:19:54.16:0,54,684	0/0:22,0:22:66.21:0,66,844	0/0:34,0:34:99:0,99,1285	0/0:17,0:17:51.16:0,51,650	0/0:31,0:31:93.29:0,93,1193	0/0:31,0:31:90.28:0,90,1154	0/0:43,0:43:99:0,129,1612	0/0:17,0:17:42.14:0,42,540	0/0:22,0:22:63.20:0,63,812	0/0:32,0:32:90.28:0,90,1154	0/0:23,0:23:66.17:0,66,825	0/0:30,0:30:90.24:0,90,1113	0/0:20,0:20:54.18:0,54,701	0/0:21,0:21:60.19:0,60,779	0/0:25,0:25:75.24:0,75,974	0/0:28,0:28:84.27:0,84,1091	0/0:27,0:27:81.26:0,81,1051	0/0:6,0:6:18.06:0,18,233
chr10	8522144	.	G	GCACACA	1172.38	PASS	AB=0.992;AC=17;AF=0.304;AN=56;BaseQRankSum=8.648;DP=704;FS=1.209;HRun=0;HaplotypeScore=140.1929;InbreedingCoeff=-0.2931;MQ=50.64;MQ0=24;MQRankSum=-2.895;QD=3.43;ReadPosRankSum=-2.039;VQSLOD=2.4594;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:31,0:30:12.04:150,12,0	0/1:8,0:7:56.79:57,0,185	0/0:38,0:8:11.54:0,12,210	0/0:64,0:9:13.75:0,14,113	0/1:21,0:20:7.84:8,0,421	0/0:17,0:16:9.45:0,9,74	0/0:28,0:27:0.47:0,0,21	0/1:25,0:23:99:147,0,714	0/0:21,0:21:1.22:0,1,442	0/1:34,0:34:62.57:63,0,949	0/0:11,0:11:8.76:0,9,127	0/1:29,0:30:49.06:49,0,400	0/1:27,0:27:57.46:57,0,292	0/1:29,0:29:14.84:15,0,480	0/0:34,0:33:41.83:0,42,591	0/1:30,0:28:6.94:234,0,7	0/1:19,0:19:7.09:46,0,7	0/1:13,0:12:10.15:10,0,236	0/1:14,0:13:99:110,0,277	0/0:8,0:8:2.96:0,3,69	0/0:45,3:57:71.95:0,72,960	0/0:25,0:25:15.94:0,16,190	0/0:19,0:19:15.48:0,15,351	0/0:40,0:40:35.96:0,36,582	0/1:15,0:15:99:135,0,175	0/1:23,0:22:23.07:23,0,664	0/1:13,0:13:99:135,0,103	0/1:9,0:10:89.15:89,0,150
chr10	8522145	.	T	TACGCACACACACACACAC	8830.33	PASS	AB=0.926;AC=36;AF=0.643;AN=56;BaseQRankSum=2.834;DP=807;FS=3.939;HRun=0;HaplotypeScore=262.6556;InbreedingCoeff=0.0250;MQ=48.90;MQ0=26;MQRankSum=-3.155;QD=13.18;ReadPosRankSum=-1.972;VQSLOD=3.1752;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:35,0:34:12.04:377,12,0	1/1:10,0:9:20.78:319,21,0	0/0:37,0:8:8.05:0,8,275	0/1:66,0:9:6.15:6,0,125	1/1:23,0:22:32.65:274,33,0	1/1:7,10:20:2.14:149,2,0	1/1:39,0:38:11.68:209,12,0	0/1:31,0:29:99:812,0,265	0/0:14,0:25:47.82:0,48,582	1/1:34,0:34:23.33:743,23,0	0/1:11,0:11:9.19:9,0,119	0/1:25,0:41:99:164,0,220	0/1:26,0:34:91.83:382,0,92	0/1:25,0:35:99:162,0,271	0/1:34,0:33:18.91:189,0,19	1/1:4,0:32:11.79:572,12,0	1/1:23,0:23:22.97:1110,23,0	1/1:18,0:17:34.92:778,35,0	0/1:14,0:13:99:238,0,135	0/0:11,0:11:4.60:0,5,44	0/0:64,0:63:31.95:0,32,392	0/1:28,0:28:26:26,0,221	1/1:22,0:22:26.45:241,26,0	1/1:40,0:40:44.48:379,44,0	1/1:20,0:20:20.98:371,21,0	0/1:28,0:27:99:727,0,281	0/1:15,0:19:40.13:516,0,40	0/1:9,0:9:59.84:76,0,60
chr10	8522146	.	A	ACG	2749.81	PASS	AB=0.960;AC=33;AF=0.589;AN=56;BaseQRankSum=8.202;DP=790;FS=2.001;HRun=0;HaplotypeScore=153.1460;InbreedingCoeff=0.4715;MQ=48.29;MQ0=26;MQRankSum=-0.501;QD=5.08;ReadPosRankSum=1.550;VQSLOD=3.4005;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:8,26:35:9.92:122,10,0	1/1:10,0:9:14.76:103,15,0	0/0:37,0:8:7.69:0,8,114	0/1:67,0:9:5.21:5,0,110	1/1:22,0:21:29.11:203,29,0	0/0:16,0:15:3.30:0,3,17	1/1:13,25:38:4.23:60,4,0	0/0:33,0:30:31.32:0,31,475	0/0:25,0:25:9.68:0,10,233	1/1:30,2:32:71.83:614,72,0	0/1:7,4:11:2.72:18,0,3	0/1:41,0:41:31.19:31,0,179	0/1:31,0:31:12.85:13,0,110	0/0:35,0:35:40.74:0,41,320	1/1:23,10:32:40.64:348,41,0	1/1:28,0:26:14.57:150,15,0	1/1:8,15:23:20.49:205,20,0	1/1:18,0:17:13.29:255,13,0	0/0:14,0:13:36.91:0,37,264	0/1:12,0:12:2.88:3,0,38	0/0:61,0:60:55.68:0,56,440	1/1:7,20:28:7.49:138,7,0	1/1:15,6:21:7.17:172,7,0	1/1:32,8:40:41.34:337,41,0	1/1:20,0:20:15.43:147,15,0	0/0:28,0:27:32.96:0,33,387	0/1:19,0:19:13.25:13,0,70	0/1:9,0:9:7.92:8,0,61
chr10	8522152	.	A	ACACG	1193.48	PASS	AB=0.968;AC=17;AF=0.304;AN=56;BaseQRankSum=7.246;DP=782;FS=1.108;HRun=0;HaplotypeScore=144.6477;InbreedingCoeff=-0.3464;MQ=46.90;MQ0=28;MQRankSum=1.138;QD=2.90;ReadPosRankSum=2.965;VQSLOD=2.4959;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:34,0:33:8.96:109,0,9	0/1:10,0:9:10.02:10,0,77	0/0:41,0:10:9.42:0,9,140	0/0:69,0:9:15:0,15,195	0/0:18,0:17:0.98:0,1,144	0/0:14,0:13:6.11:0,6,31	1/1:34,0:33:3.14:30,3,0	0/0:35,0:32:62.02:0,62,565	0/1:25,0:25:99:224,0,221	0/1:29,1:31:99:325,0,203	0/0:6,4:10:3.01:0,3,57	0/1:43,0:43:39.46:39,0,240	0/1:30,0:30:9.98:10,0,136	0/0:32,0:32:22.73:0,23,217	0/0:16,8:37:7.40:0,7,150	0/1:29,0:27:71:135,0,71	0/1:23,0:23:15.01:32,0,15	0/0:18,0:17:4.56:0,5,154	0/0:13,0:12:32.69:0,33,241	0/1:14,0:14:19.38:19,0,62	0/0:55,0:54:39.99:0,40,325	0/1:24,3:27:55.10:73,0,55	0/1:19,4:24:55.34:105,0,55	0/1:32,7:39:46.43:46,0,81	0/1:20,0:20:52.79:65,0,53	0/0:27,0:26:34.95:0,35,435	0/1:21,0:21:67.97:68,0,107	0/1:8,0:8:55.02:55,0,57
chr10	8524766	.	G	GGAC	8226.55	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-9.463;DP=651;FS=6.703;HRun=0;HaplotypeScore=112.4868;InbreedingCoeff=0.9986;MQ=66.76;MQ0=5;MQRankSum=-1.303;QD=38.99;ReadPosRankSum=1.214;VQSLOD=6.1189;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:23:69.20:970,69,0	1/1:9,0:9:24.08:371,24,0	0/0:17,0:11:24.04:0,24,362	0/0:25,0:19:24.16:0,24,641	1/1:1,18:20:45.12:514,45,0	1/1:29,0:30:84.25:1247,84,0	1/1:36,0:34:81.27:1269,81,0	0/0:43,0:43:99:0,126,1970	0/0:17,0:16:48.12:0,48,711	0/0:26,0:26:72.35:0,72,1075	0/0:18,0:18:52.05:0,52,795	0/0:22,0:22:57.19:0,57,879	0/0:24,0:24:69.20:0,69,1020	0/0:22,0:22:66.21:0,66,1032	0/0:29,0:29:78.26:0,78,1222	1/1:34,0:33:96.32:1502,96,0	1/1:27,0:27:69.15:973,69,0	1/1:8,0:8:24.08:325,24,0	0/0:22,0:22:51.16:0,51,798	0/0:24,0:24:66.21:0,66,1022	0/0:17,0:16:48.16:0,48,714	0/0:20,0:20:52.04:0,52,768	0/0:32,0:32:96.32:0,96,1496	0/0:17,0:17:42.13:0,42,605	1/1:24,0:24:69.21:1055,69,0	0/0:28,0:28:81.27:0,81,1260	0/0:24,0:24:69.16:0,69,1001	0/0:13,0:13:30.10:0,30,463
chr10	8524868	.	CTCCTTCCTTCCT	C	11563.97	PASS	AB=0.910;AC=35;AF=0.625;AN=56;BaseQRankSum=-7.121;DP=484;FS=1.836;HRun=0;HaplotypeScore=162.7573;InbreedingCoeff=0.5729;MQ=36.32;MQ0=17;MQRankSum=-7.329;QD=40.72;ReadPosRankSum=-1.113;VQSLOD=4.5663;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:17:24.60:862,25,0	1/1:12,0:11:27.09:697,27,0	0/0:30,0:6:6.02:0,6,140	0/0:32,0:9:6.02:0,6,155	1/1:4,20:23:21.07:447,21,0	0/1:18,0:18:12.21:573,0,12	1/1:16,0:11:12.04:370,12,0	1/1:11,0:11:10.24:313,10,0	1/1:14,0:13:30.10:870,30,0	0/0:11,0:16:30.09:0,30,500	0/0:16,0:15:15:0,15,216	0/1:16,0:15:17.62:967,0,18	1/1:22,0:22:30.10:799,30,0	1/1:16,0:14:33.11:965,33,0	0/0:34,0:32:39.12:0,39,546	1/1:15,0:15:33.11:990,33,0	1/1:15,0:11:18.06:494,18,0	1/1:5,0:5:12.04:339,12,0	0/1:7,0:6:61.63:62,0,77	1/1:3,9:12:14.64:294,15,0	0/1:9,0:8:48.55:289,0,49	0/0:13,0:24:33.03:0,33,431	0/0:26,0:26:39.11:0,39,520	0/0:18,0:15:15.03:0,15,190	1/1:15,0:14:30.10:910,30,0	0/1:3,14:17:4.40:786,0,4	1/1:5,13:16:8.86:215,9,0	1/1:4,0:4:12.04:322,12,0
chr10	8524871	.	CT	C	1674.28	PASS	AB=0.940;AC=31;AF=0.554;AN=56;BaseQRankSum=8.994;DP=472;FS=1.092;HRun=2;HaplotypeScore=121.0629;InbreedingCoeff=-0.3774;MQ=37.70;MQ0=20;MQRankSum=2.563;QD=4.26;ReadPosRankSum=5.092;VQSLOD=0.7099;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:17,0:17:11.54:64,0,12	0/1:12,0:11:19.34:53,0,19	0/0:35,0:6:17.89:0,18,232	0/0:36,1:10:24:0,24,266	0/1:23,0:23:4.83:5,0,27	0/1:10,0:19:46.62:47,0,47	1/1:16,0:11:9.12:31,9,0	0/1:11,0:11:8.34:8,0,108	0/1:14,0:13:22.50:51,0,22	0/1:12,1:12:72.38:156,0,72	0/1:7,6:12:18.01:72,0,18	0/1:16,0:15:15.68:84,0,16	1/1:26,0:26:9.44:81,9,0	0/1:18,0:16:12.52:61,0,13	1/1:6,21:25:7.42:272,7,0	0/1:16,0:16:11.81:68,0,12	0/1:15,0:11:26.50:27,0,43	0/1:5,0:5:8.05:26,0,8	0/0:7,0:6:1.10:0,1,100	0/1:12,0:12:7.69:22,0,8	0/1:9,0:8:9.85:10,0,36	0/1:19,0:18:59.11:138,0,59	1/1:7,14:20:4.95:289,5,0	0/1:7,10:14:3.98:95,0,4	0/1:15,0:14:23.40:58,0,23	0/1:16,1:17:19.72:36,0,20	1/1:17,0:15:4.11:19,4,0	1/1:5,0:5:13.44:62,13,0
chr10	8524873	.	TC	T	3200.59	PASS	AB=0.793;AC=30;AF=0.536;AN=56;BaseQRankSum=9.356;DP=477;FS=0.520;HRun=2;HaplotypeScore=114.2375;InbreedingCoeff=-0.5716;MQ=38.20;MQ0=20;MQRankSum=2.373;QD=7.98;ReadPosRankSum=6.035;VQSLOD=0.9973;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:11,6:17:29.27:254,0,29	0/1:3,8:11:63.62:193,0,64	0/0:35,0:6:17.85:0,18,231	0/0:40,0:10:20.89:0,21,226	0/1:21,2:23:23.16:69,0,23	0/1:13,5:18:99:146,0,101	1/1:5,11:11:12:107,12,0	0/1:8,4:12:99:111,0,201	0/1:4,10:13:63.17:238,0,63	0/1:14,0:13:20.25:20,0,135	0/1:13,1:13:2.66:3,0,100	0/1:5,12:16:53.37:277,0,53	1/1:17,9:26:11.35:280,11,0	0/1:6,12:16:49.57:268,0,50	0/1:26,0:24:18.73:19,0,22	0/1:7,11:18:50.32:277,0,50	0/1:11,4:11:93.57:121,0,94	0/1:1,4:5:25.61:110,0,26	0/1:6,1:6:19.64:20,0,182	0/1:11,1:12:21.80:87,0,22	0/1:4,5:8:51.41:64,0,51	0/1:19,0:18:38.38:38,0,108	0/1:19,0:18:24.50:25,0,70	0/1:17,0:14:16.63:17,0,45	0/1:3,12:14:37.46:246,0,37	0/1:17,0:17:50.93:147,0,51	1/1:16,1:15:5.87:56,6,0	1/1:2,3:5:15.04:168,15,0
chr10	8524874	.	CCTTCCT	C	10081.61	PASS	AB=1.000;AC=28;AF=0.500;AN=56;BaseQRankSum=-0.025;DP=486;FS=0.000;HRun=0;HaplotypeScore=120.9569;InbreedingCoeff=0.0790;MQ=38.79;MQ0=20;MQRankSum=-4.852;QD=33.05;ReadPosRankSum=2.092;VQSLOD=4.4566;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:10,0:17:12.17:786,0,12	0/1:12,0:12:1.85:588,0,2	0/0:36,0:6:13.99:0,14,279	0/0:41,0:10:27.09:0,27,510	1/1:23,0:23:4.10:348,4,0	0/1:18,0:18:21.53:447,0,22	1/1:19,0:14:21.07:432,21,0	0/1:17,0:17:68.66:524,0,69	0/1:15,0:14:17.80:724,0,18	0/0:15,0:14:41.12:0,41,477	0/0:13,0:12:26.16:0,26,272	0/1:18,0:17:32.66:835,0,33	1/1:12,14:27:21.15:778,21,0	1/1:17,0:16:3.16:808,3,0	0/0:25,0:23:39.54:0,40,196	0/1:20,0:20:8.79:822,0,9	0/1:13,0:11:12.91:352,0,13	0/1:5,0:5:5.92:268,0,6	0/1:7,0:6:54.73:55,0,93	1/1:11,0:12:0.81:240,1,0	0/1:8,0:8:86.77:222,0,87	0/0:17,0:16:37.62:0,38,378	0/0:18,0:17:45.67:0,46,284	0/0:16,0:13:17.38:0,17,164	1/1:14,0:13:0.15:692,0,0	0/1:17,0:17:13.08:636,0,13	1/1:17,0:15:8.71:176,9,0	1/1:4,0:5:15.05:351,15,0
chr10	8524878	.	CCT	C	5759.52	PASS	AB=0.756;AC=25;AF=0.446;AN=56;BaseQRankSum=7.805;DP=501;FS=1.612;HRun=0;HaplotypeScore=114.2727;InbreedingCoeff=-0.4141;MQ=39.32;MQ0=22;MQRankSum=1.711;QD=16.22;ReadPosRankSum=6.902;VQSLOD=4.7637;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:9,7:17:64.54:422,0,65	0/1:4,8:12:90.31:316,0,90	0/0:38,0:6:12.27:0,12,184	0/0:47,0:9:21.06:0,21,302	0/1:21,2:23:20.56:212,0,21	0/1:12,5:17:93.54:209,0,94	1/1:7,12:14:21.06:261,21,0	0/1:10,6:16:99:391,0,112	0/1:6,10:15:87:415,0,87	0/0:15,0:14:14.86:0,15,302	0/0:14,0:13:9.74:0,10,225	0/1:7,12:18:71.99:469,0,72	0/1:17,10:27:4.97:410,0,5	0/1:7,13:18:78.54:415,0,79	0/1:26,0:24:21.67:22,0,25	0/1:10,11:21:42.94:470,0,43	0/1:13,4:13:99:210,0,99	0/1:1,4:5:29.04:151,0,29	0/1:6,1:6:29.71:30,0,203	0/1:12,0:12:26.11:129,0,26	0/1:4,5:8:73.91:147,0,74	0/0:16,0:15:6.55:0,7,220	0/1:19,0:18:15.96:16,0,69	0/0:16,0:13:0.85:0,1,80	0/1:2,12:13:51.99:347,0,52	0/1:17,0:17:47.47:377,0,47	1/1:16,1:15:8.92:122,9,0	1/1:2,3:5:15.05:218,15,0
chr10	8524880	.	T	TC	3849.52	PASS	AB=0.907;AC=23;AF=0.411;AN=56;BaseQRankSum=6.676;DP=523;FS=0.000;HRun=2;HaplotypeScore=117.2769;InbreedingCoeff=-0.2453;MQ=41.63;MQ0=24;MQRankSum=-5.157;QD=11.92;ReadPosRankSum=2.536;VQSLOD=2.2594;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:12,8:20:41.55:285,0,42	0/1:11,2:13:83.92:216,0,84	0/0:43,0:6:12:0,12,146	0/0:46,0:7:15.05:0,15,198	0/1:24,0:24:32.55:170,0,33	0/1:17,0:17:98.40:107,0,98	1/1:16,4:15:20.92:219,21,0	0/1:11,5:16:83.30:334,0,83	0/1:14,2:15:80.36:280,0,80	0/0:16,0:15:44.49:0,44,446	0/0:14,0:13:29.55:0,30,290	0/1:17,4:20:68.81:290,0,69	0/1:26,1:27:3.21:279,0,3	0/1:17,5:20:82.39:256,0,82	0/0:26,0:24:40.52:0,41,245	0/1:14,6:20:38.80:296,0,39	0/1:16,2:14:95.57:158,0,96	0/1:5,0:5:27.17:62,0,27	0/1:9,0:8:48.84:49,0,186	0/1:12,0:12:25.25:103,0,25	0/1:8,1:8:64.63:109,0,65	0/0:17,0:16:38.35:0,38,342	0/0:20,0:19:46.64:0,47,317	0/0:18,0:15:17.66:0,18,151	0/1:14,0:13:48.08:166,0,48	0/1:17,0:17:57.35:241,0,57	1/1:18,0:16:8.60:64,9,0	1/1:4,1:5:15.04:167,15,0
chr10	8525797	.	GGAGAGAGAGA	G	274.41	PASS	AB=1.000;AC=11;AF=0.229;AN=48;BaseQRankSum=2.285;DP=441;FS=25.088;HRun=0;HaplotypeScore=134.0746;InbreedingCoeff=0.4812;MQ=59.96;MQ0=29;MQRankSum=0.284;QD=2.56;ReadPosRankSum=-1.444;VQSLOD=0.8772;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:9.03:0,9,326	0/0:5,0:5:3.01:0,3,72	./.	./.	0/0:16,0:14:3.01:0,3,61	0/0:21,0:21:3.48:0,3,117	0/0:15,0:13:8.99:0,9,208	0/0:20,0:14:3.35:0,3,16	1/1:9,0:13:5.88:45,6,0	1/1:21,0:20:8:178,8,0	0/0:13,0:13:0:0,0,0	0/0:26,0:24:18.06:0,18,452	0/0:11,0:10:11.97:0,12,214	0/0:15,0:15:15.05:0,15,431	1/1:24,5:28:3.01:60,3,0	0/0:15,0:15:2.97:0,3,20	0/0:10,0:10:6.02:0,6,202	0/0:9,0:9:12.51:0,13,337	0/0:7,0:5:0.47:0,0,1	0/1:15,0:15:0.17:0,0,0	0/0:11,0:6:3:0,3,27	1/1:11,2:12:2.90:59,3,0	1/1:12,4:16:3.01:56,3,0	./.	./.	0/0:9,0:9:9.03:0,9,320	0/0:13,0:12:12.04:0,12,372	0/0:10,0:8:6.02:0,6,111
chr10	8528169	.	C	CATAG	5210.09	PASS	AB=0.923;AC=21;AF=0.420;AN=50;BaseQRankSum=-9.115;DP=634;FS=4.059;HRun=0;HaplotypeScore=151.2386;InbreedingCoeff=0.6981;MQ=72.46;MQ0=5;MQRankSum=3.141;QD=19.59;ReadPosRankSum=-2.278;VQSLOD=3.9578;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:9.28:0,9,432	1/1:10,1:11:3.01:70,3,0	./.	./.	1/1:18,19:38:36.12:821,36,0	1/1:15,8:24:21.07:487,21,0	1/1:10,2:12:17.07:275,17,0	./.	0/0:6,0:16:12.01:0,12,112	1/1:13,11:26:42.13:886,42,0	1/1:15,5:20:15.05:348,15,0	0/0:12,0:27:22.98:0,23,153	0/0:15,0:30:32.62:0,33,273	0/0:11,0:22:24.49:0,24,166	1/1:15,12:27:32.85:697,33,0	0/0:25,0:25:42.13:0,42,613	0/1:33,0:35:2.27:338,0,2	0/1:17,0:17:51.43:51,0,210	0/0:17,0:23:17.61:0,18,149	0/0:12,0:21:17.26:0,17,107	0/0:9,0:13:3:0,3,27	0/1:9,2:11:99:124,0,122	1/1:10,12:22:27.09:626,27,0	0/0:19,0:19:16.48:0,16,288	1/1:12,9:21:21.07:487,21,0	0/0:13,0:30:47.98:0,48,436	0/0:16,0:30:32.94:0,33,296	0/0:2,0:6:9.01:0,9,84
chr10	8528413	.	CATAG	C	5344.55	PASS	AB=0.985;AC=36;AF=0.720;AN=50;BaseQRankSum=8.266;DP=603;FS=7.175;HRun=0;HaplotypeScore=140.9693;InbreedingCoeff=-0.0388;MQ=61.19;MQ0=3;MQRankSum=-0.495;QD=10.69;ReadPosRankSum=-3.449;VQSLOD=3.2063;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:25,12:37:54.06:672,54,0	1/1:6,4:10:6.02:93,6,0	./.	./.	1/1:11,29:40:60.20:875,60,0	1/1:8,16:24:21.07:310,21,0	1/1:5,3:8:3.01:47,3,0	0/0:43,0:43:41.84:0,42,338	0/0:21,0:21:30.03:0,30,457	1/1:20,0:20:35.97:320,36,0	1/1:22,0:22:12.43:45,12,0	0/1:24,0:24:66.94:167,0,67	0/1:24,0:24:56.95:132,0,57	0/1:19,0:19:85.53:86,0,89	1/1:24,0:24:52.59:427,53,0	1/1:7,11:18:20.86:321,21,0	0/1:23,5:27:12.88:259,0,13	1/1:13,5:18:21.98:286,22,0	0/1:16,0:15:34.01:34,0,280	0/1:29,0:29:41.93:307,0,42	0/1:19,0:19:28.98:109,0,29	./.	1/1:12,0:12:9.27:37,9,0	1/1:10,0:10:8.84:66,9,0	1/1:7,11:17:12.04:189,12,0	0/1:29,0:29:99:293,0,100	0/1:39,0:39:77.93:161,0,78	0/1:12,0:12:41.96:110,0,42
chr10	8528443	.	TAGATAGATAGAC	T	5585.42	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=-4.739;DP=595;FS=8.695;HRun=0;HaplotypeScore=222.3634;InbreedingCoeff=0.5117;MQ=57.92;MQ0=9;MQRankSum=-5.013;QD=24.93;ReadPosRankSum=-5.146;VQSLOD=1.8156;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:81.62:0,82,1766	0/0:9,0:9:21.01:0,21,332	0/0:13,0:9:10:0,10,132	0/0:17,0:7:14.87:0,15,135	0/0:40,0:40:87.20:0,87,2078	0/0:25,0:25:42.07:0,42,929	0/0:5,0:5:6.01:0,6,110	0/1:42,0:42:99:375,0,977	0/1:15,0:15:29.83:30,0,1139	1/1:13,9:22:63.17:1540,63,0	1/1:1,19:20:24.08:566,24,0	0/0:19,0:19:33.11:0,33,710	0/0:23,0:23:30.10:0,30,797	0/0:18,0:18:27.09:0,27,541	1/1:18,13:31:75.23:2196,75,0	0/0:16,0:16:33.07:0,33,802	0/0:29,0:28:32.96:0,33,1024	0/0:17,0:17:36.85:0,37,630	0/1:19,0:17:52.81:53,0,1043	0/0:29,0:29:37.18:0,37,1194	0/0:21,0:21:21.07:0,21,537	1/1:0,9:9:9.03:156,9,0	1/1:0,15:15:14.64:367,15,0	1/1:8,1:9:12.02:214,12,0	0/0:17,0:17:27.05:0,27,588	0/1:30,0:30:50.66:51,0,1568	0/0:33,0:33:3.39:0,3,837	0/1:12,0:12:36.86:37,0,591
chr10	8528451	.	TAGAC	T	7214.01	PASS	AB=0.991;AC=41;AF=0.732;AN=56;BaseQRankSum=1.649;DP=603;FS=0.000;HRun=0;HaplotypeScore=156.6098;InbreedingCoeff=-0.0271;MQ=60.18;MQ0=6;MQRankSum=-1.188;QD=12.66;ReadPosRankSum=6.243;VQSLOD=4.1799;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:40,0:40:99:219,0,176	0/1:8,0:8:27.35:27,0,81	0/0:14,0:11:16:0,16,191	0/0:17,0:9:14.07:0,14,168	0/1:40,0:40:99:334,0,173	0/1:26,0:26:99:117,0,147	0/1:6,0:6:20.86:21,0,40	1/1:40,0:40:68.81:611,69,0	0/1:17,0:17:99:138,0,172	1/1:24,0:24:60.13:646,60,0	1/1:19,0:19:20.57:124,21,0	1/1:4,15:19:21.07:354,21,0	1/1:4,19:23:18.06:305,18,0	1/1:4,12:16:12.04:203,12,0	1/1:30,0:30:65.83:634,66,0	0/1:20,0:20:99:130,0,112	0/1:26,0:26:84.30:84,0,143	0/1:17,0:17:14.16:103,0,14	0/1:17,2:18:99:298,0,106	1/1:3,25:28:42.10:675,42,0	1/1:2,19:21:15.05:254,15,0	1/1:9,0:9:8.79:52,9,0	1/1:15,0:15:11.76:72,12,0	1/1:9,0:9:8.95:84,9,0	0/1:18,0:18:55.71:56,0,142	1/1:6,26:32:78.04:996,78,0	1/1:7,29:36:23.78:352,24,0	1/1:9,3:12:24.02:324,24,0
chr10	8528576	.	GTAGATAGATAGA	G	8843.64	PASS	AB=0.822;AC=36;AF=0.720;AN=50;BaseQRankSum=-4.357;DP=587;FS=12.236;HRun=0;HaplotypeScore=253.5467;InbreedingCoeff=0.4193;MQ=47.89;MQ0=9;MQRankSum=-2.936;QD=18.31;ReadPosRankSum=0.436;VQSLOD=2.2524;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:16,0:22:33.34:123,0,33	1/1:4,0:17:15.04:355,15,0	./.	./.	./.	1/1:11,0:32:19.63:259,20,0	1/1:12,0:12:2.77:55,3,0	1/1:32,10:37:30.07:439,30,0	0/0:3,0:17:39.13:0,39,965	1/1:16,22:38:62.73:1739,63,0	1/1:12,29:41:2.81:71,3,0	1/1:14,9:23:5.98:208,6,0	1/1:7,13:20:12:389,12,0	1/1:2,11:13:9.03:272,9,0	1/1:6,13:19:12.04:415,12,0	1/1:6,0:20:18.06:467,18,0	1/1:9,0:16:2.96:22,3,0	0/1:11,0:14:43:43,0,248	1/1:17,10:24:24.08:707,24,0	1/1:6,19:25:14.96:476,15,0	0/0:8,5:13:0:0,0,0	0/0:4,0:13:21.07:0,21,539	0/0:5,0:13:18.06:0,18,428	0/0:5,0:12:12.04:0,12,279	0/1:4,0:23:8.66:331,0,9	1/1:3,16:20:8.33:1331,8,0	1/1:16,25:41:25.27:872,25,0	0/1:12,4:15:44.84:271,0,45
chr10	8528591	.	GA	G	396.29	PASS	AB=0.871;AC=8;AF=0.143;AN=56;BaseQRankSum=7.349;DP=518;FS=0.554;HRun=1;HaplotypeScore=197.2681;InbreedingCoeff=-0.1991;MQ=49.12;MQ0=10;MQRankSum=-7.506;QD=2.87;ReadPosRankSum=5.951;VQSLOD=-0.2833;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:12,5:17:39.86:40,0,251	0/1:15,0:15:56.40:56,0,116	0/0:9,0:4:9.03:0,9,125	0/0:8,0:4:6.91:0,7,79	0/0:17,0:17:5.90:0,6,92	0/1:27,0:27:2.20:2,0,214	0/1:9,4:13:99:141,0,202	0/0:31,1:27:18.07:0,18,681	0/0:18,0:18:23.98:0,24,168	0/0:34,0:34:38.45:0,38,606	0/0:37,0:37:17.47:0,17,257	0/0:18,0:18:14.26:0,14,206	0/0:18,0:18:6.76:0,7,132	0/0:13,0:13:10.11:0,10,120	0/0:20,0:20:5.81:0,6,171	0/1:15,0:15:19.92:20,0,57	0/1:10,6:16:31.20:130,0,31	0/1:8,6:14:99:126,0,249	0/0:21,0:17:27.41:0,27,438	0/0:23,0:23:3.46:0,3,29	0/0:10,0:10:5.85:0,6,91	0/0:11,0:11:11.73:0,12,65	0/0:11,0:11:16.51:0,17,152	0/0:12,0:12:9.41:0,9,100	0/1:21,0:21:6.01:6,0,172	0/0:18,0:18:18.59:0,19,225	0/0:35,0:35:7.77:0,8,256	0/0:15,0:13:20.25:0,20,343
chr10	8528681	.	T	TGATA	5584.28	PASS	AB=0.833;AC=23;AF=0.460;AN=50;BaseQRankSum=-6.983;DP=511;FS=1.950;HRun=0;HaplotypeScore=112.6345;InbreedingCoeff=0.7225;MQ=60.84;MQ0=9;MQRankSum=1.610;QD=22.25;ReadPosRankSum=-0.430;VQSLOD=4.5108;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:25:17.22:0,17,193	0/0:4,0:10:21.02:0,21,196	./.	./.	0/0:19,0:28:2.97:0,3,20	0/0:17,0:24:18.02:0,18,171	0/0:9,0:10:1.55:0,2,4	1/1:36,0:33:4.23:26,4,0	0/0:3,0:9:15.02:0,15,139	0/0:21,0:22:33.11:0,33,493	0/0:34,0:34:39.12:0,39,557	1/1:7,8:15:12.04:279,12,0	0/1:16,4:20:18.63:446,0,19	1/1:3,11:15:24.08:537,24,0	1/1:12,4:16:30.07:547,30,0	0/0:10,0:13:11.99:0,12,104	0/0:15,0:25:4.11:0,4,270	./.	1/1:17,2:19:9.03:209,9,0	1/1:24,9:33:60.19:1333,60,0	0/0:4,0:5:9.02:0,9,119	0/0:2,0:2:3.01:0,3,46	1/1:13,0:13:11.98:121,12,0	1/1:7,0:7:2.99:25,3,0	0/0:11,0:15:10.83:0,11,89	1/1:24,4:26:27.08:556,27,0	1/1:30,7:37:57.15:1155,57,0	1/1:3,8:12:15.05:349,15,0
chr10	8529352	.	G	GT	845.18	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-6.748;DP=633;FS=0.747;HRun=6;HaplotypeScore=58.1764;InbreedingCoeff=0.9936;MQ=67.61;MQ0=0;MQRankSum=0.625;QD=30.18;ReadPosRankSum=0.037;VQSLOD=4.0854;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:63.05:0,63,618	0/0:11,0:11:30.07:0,30,306	0/0:27,0:24:60.03:0,60,576	0/0:13,0:13:30.04:0,30,294	0/0:35,0:35:99:0,99,1008	0/0:17,0:17:48.10:0,48,483	0/0:14,0:14:39.03:0,39,376	0/0:31,0:31:78.17:0,78,795	1/1:2,26:28:75.24:940,75,0	0/0:24,0:24:63.12:0,63,634	0/0:26,0:26:75.16:0,75,758	0/0:17,0:17:51.12:0,51,520	0/0:21,0:21:60.14:0,60,612	0/0:23,0:23:69.16:0,69,703	0/0:27,0:27:75.17:0,75,764	0/0:31,0:31:90.19:0,90,911	0/0:33,0:33:90.18:0,90,910	0/0:24,0:24:47.32:0,47,613	0/0:20,0:20:48.07:0,48,476	0/0:34,0:34:87.17:0,87,879	0/0:25,0:25:75.14:0,75,751	0/0:28,0:28:72.16:0,72,734	0/0:10,0:10:27.06:0,27,275	0/0:13,0:13:33.05:0,33,328	0/0:22,0:22:66.15:0,66,673	0/0:24,0:24:72.15:0,72,729	0/0:20,0:20:51.11:0,51,520	0/0:13,0:13:21.04:0,21,214
chr10	8530772	.	GTATGTATTATA	G	16119.01	PASS	AB=0.559;AC=34;AF=0.607;AN=56;BaseQRankSum=15.364;DP=768;FS=2.098;HRun=0;HaplotypeScore=264.7827;InbreedingCoeff=0.7952;MQ=50.93;MQ0=9;MQRankSum=-11.739;QD=34.44;ReadPosRankSum=-0.889;VQSLOD=4.0794;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:6,26:32:21.66:637,22,0	1/1:1,7:8:9.03:266,9,0	0/0:39,0:26:3.23:0,3,1547	0/0:32,0:19:33.46:0,33,1133	1/1:1,31:32:7.03:224,7,0	1/1:2,23:24:26.41:777,26,0	0/1:3,12:15:0.02:0,0,2	1/1:11,30:41:81.18:1999,81,0	0/0:23,0:23:57.20:0,57,2533	0/0:43,0:43:99:0,120,5706	0/0:24,0:24:63.22:0,63,3195	1/1:1,20:21:20.39:676,20,0	1/1:5,27:32:59.87:1868,60,0	1/1:5,24:29:26.07:803,26,0	0/0:22,0:22:54.19:0,54,2637	1/1:3,22:25:45.15:1336,45,0	1/1:4,17:21:17.69:551,18,0	1/1:4,9:13:13.29:414,13,0	1/1:8,18:25:48.09:1171,48,0	1/1:8,35:43:27.25:732,27,0	0/0:6,23:28:1.36:0,1,3	0/0:29,0:29:84.29:0,84,3834	0/0:29,0:29:75.26:0,75,3588	0/0:29,0:29:81.28:0,81,3529	1/1:3,28:29:32.30:878,32,0	0/1:10,35:45:69.69:2702,0,70	1/1:4,22:26:32.36:1014,32,0	1/1:0,3:3:3.01:72,3,0
chr10	8530779	.	T	TG	4399.23	PASS	AB=0.987;AC=32;AF=0.571;AN=56;BaseQRankSum=11.619;DP=704;FS=1.227;HRun=0;HaplotypeScore=195.6683;InbreedingCoeff=0.7090;MQ=53.15;MQ0=9;MQRankSum=-9.608;QD=11.22;ReadPosRankSum=-2.873;VQSLOD=4.6833;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:26:16.84:250,17,0	1/1:7,0:7:2.78:68,3,0	0/0:37,1:25:29.69:0,30,761	0/0:35,0:21:34.82:0,35,548	1/1:31,0:31:7.82:108,8,0	1/1:23,1:22:20.18:285,20,0	0/1:12,0:12:0.39:1,0,0	1/1:30,1:31:56.29:712,56,0	0/0:22,0:22:63.19:0,63,863	0/0:46,0:46:99:0,138,1912	0/0:24,0:24:69.23:0,69,965	1/1:21,0:21:1.02:128,1,0	1/1:28,0:28:5.50:356,6,0	1/1:24,0:24:13.32:223,13,0	0/0:25,0:25:66.21:0,66,907	1/1:22,1:23:18.97:381,19,0	1/1:17,0:17:18.53:217,19,0	0/0:9,0:9:7.27:0,7,21	1/1:19,1:19:1.41:217,1,0	1/1:35,0:35:29.48:354,29,0	0/0:23,0:23:0.21:0,0,1	0/0:31,0:31:93.28:0,93,1280	0/0:30,0:30:81.27:0,81,1133	0/0:29,0:29:87.29:0,87,1215	1/1:29,2:29:26.37:357,26,0	0/1:36,1:37:15.80:481,0,16	1/1:22,0:22:7.02:225,7,0	1/1:3,0:3:3.01:37,3,0
chr10	8532878	.	T	TAA	656.38	PASS	AB=0.962;AC=12;AF=0.214;AN=56;BaseQRankSum=4.457;DP=256;FS=7.894;HRun=2;HaplotypeScore=59.8723;InbreedingCoeff=0.0919;MQ=82.87;MQ0=3;MQRankSum=-2.030;QD=8.20;ReadPosRankSum=5.705;VQSLOD=0.3505;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:5,4:9:31.82:32,0,36	0/1:6,0:6:2.25:2,0,85	0/0:21,0:14:6.17:0,6,63	0/0:37,0:17:5.93:0,6,146	0/1:7,0:7:14.63:15,0,63	0/1:5,0:5:23.86:24,0,39	0/0:1,0:1:3:0,3,25	0/0:35,0:35:93.12:0,93,1181	0/0:2,0:2:5.87:0,6,39	0/0:5,0:5:8.68:0,9,67	0/0:3,0:3:2.80:0,3,13	0/0:7,0:7:17.96:0,18,217	0/0:8,0:8:21.03:0,21,248	0/0:6,0:6:14.96:0,15,154	1/1:1,0:1:2.98:22,3,0	0/1:4,0:4:36.75:37,0,38	1/1:18,0:18:11.08:267,11,0	0/1:18,0:18:1.87:312,0,2	0/0:9,0:8:21.06:0,21,286	0/0:4,0:4:12.04:0,12,175	0/0:3,0:3:5.93:0,6,61	0/1:5,0:5:0.22:0,0,41	0/0:3,0:3:5.99:0,6,50	0/0:2,0:2:2.99:0,3,24	0/1:7,0:7:10.98:85,0,11	0/0:10,0:10:24.05:0,24,284	0/0:8,0:8:18.04:0,18,244	0/0:11,0:11:30.06:0,30,394
chr10	8532879	.	A	AAT	1642.87	PASS	AB=0.988;AC=28;AF=0.560;AN=50;BaseQRankSum=-1.682;DP=253;FS=2.979;HRun=0;HaplotypeScore=58.6567;InbreedingCoeff=0.5505;MQ=82.56;MQ0=3;MQRankSum=0.261;QD=10.74;ReadPosRankSum=2.920;VQSLOD=3.3080;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,1:8:6.02:86,6,0	1/1:4,2:6:3.01:35,3,0	0/1:23,0:15:6.13:6,0,22	0/1:40,0:17:27.13:27,0,90	1/1:5,0:5:6.01:75,6,0	1/1:2,3:5:3.01:51,3,0	./.	0/0:34,0:34:75.20:0,75,908	1/1:2,0:2:1.25:3,1,0	1/1:6,0:6:2.92:17,3,0	1/1:2,0:2:2.74:12,3,0	0/0:6,0:6:12.04:0,12,149	0/0:7,0:7:12.02:0,12,139	0/0:5,0:5:6.02:0,6,66	1/1:0,0:1:3.01:40,3,0	1/1:2,2:4:6.02:86,6,0	1/1:5,15:20:30.10:505,30,0	1/1:3,15:18:39.13:657,39,0	0/0:9,0:8:18.02:0,18,200	0/0:4,0:4:12.02:0,12,132	0/0:3,0:3:3.01:0,3,38	1/1:3,0:5:3:27,3,0	./.	./.	1/1:2,5:7:12.04:187,12,0	0/0:9,0:9:12.04:0,12,153	0/0:6,0:6:15.05:0,15,192	0/0:11,0:11:24.01:0,24,251
chr10	8532941	.	T	TAA	1388.58	PASS	AB=1.000;AC=33;AF=0.917;AN=36;BaseQRankSum=-0.243;DP=192;FS=3.404;HRun=2;HaplotypeScore=115.6338;InbreedingCoeff=0.3127;MQ=109.28;MQ0=12;MQRankSum=-4.689;QD=12.98;ReadPosRankSum=2.977;VQSLOD=1.1249;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,1:1:3.01:42,3,0	1/1:1,0:1:1.25:3,1,0	0/1:33,0:16:2.24:2,0,49	0/0:81,0:39:35.82:0,36,230	1/1:0,1:1:3.01:41,3,0	1/1:2,0:2:2.22:7,2,0	./.	1/1:22,9:31:48.58:595,49,0	./.	1/1:0,1:1:3.01:36,3,0	1/1:0,1:1:3.01:35,3,0	1/1:1,0:1:2.97:20,3,0	./.	./.	./.	./.	1/1:4,7:11:24.02:282,24,0	1/1:5,2:7:15.20:146,15,0	1/1:3,1:3:8.97:87,9,0	1/1:0,1:1:3.01:42,3,0	./.	./.	./.	./.	1/1:3,0:3:3.28:9,3,0	1/1:1,0:1:1.55:4,2,0	1/1:2,0:2:3.87:24,4,0	1/1:4,2:6:10.74:116,11,0
chr10	8532944	.	T	TA	609.80	PASS	AB=0.827;AC=26;AF=0.684;AN=38;BaseQRankSum=3.987;DP=190;FS=5.333;HRun=2;HaplotypeScore=113.7403;InbreedingCoeff=0.0528;MQ=111.34;MQ0=12;MQRankSum=-5.116;QD=5.98;ReadPosRankSum=4.292;VQSLOD=1.0374;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,0:1:2.96:19,3,0	1/1:1,0:1:2.68:11,3,0	0/1:28,0:13:17.62:18,0,83	0/0:83,0:41:49.76:0,50,407	1/1:1,0:1:2.92:17,3,0	1/1:2,0:2:2.46:11,2,0	./.	0/1:29,0:29:46.87:262,0,47	./.	1/1:1,0:1:2.96:19,3,0	1/1:1,0:1:2.94:18,3,0	0/0:1,0:1:2.98:0,3,22	./.	./.	0/0:2,0:2:0:0,0,1	./.	1/1:12,0:12:8.76:112,9,0	0/1:5,2:7:0.13:113,0,0	0/1:3,1:3:9.79:31,0,10	1/1:1,0:1:2.96:19,3,0	./.	./.	./.	./.	1/1:3,1:4:4.61:20,5,0	1/1:1,0:1:2.74:12,3,0	0/1:1,1:2:0.69:1,0,15	0/1:4,2:6:2.22:38,0,2
chr10	8532946	.	T	TA	705.67	PASS	AB=0.813;AC=21;AF=0.553;AN=38;BaseQRankSum=0.365;DP=187;FS=0.000;HRun=1;HaplotypeScore=111.2307;InbreedingCoeff=0.0877;MQ=109.12;MQ0=12;MQRankSum=-4.226;QD=7.51;ReadPosRankSum=6.637;VQSLOD=0.5892;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,1:1:3.01:30,3,0	1/1:1,0:1:0.89:2,1,0	0/1:27,1:12:8.90:9,0,86	0/0:80,0:40:28.46:0,28,440	1/1:0,1:1:3:29,3,0	0/0:2,0:2:0.15:0,0,13	./.	0/1:21,9:30:82.20:344,0,82	./.	1/1:0,1:1:2.80:13,3,0	1/1:0,1:1:2.74:12,3,0	0/0:1,0:1:3.01:0,3,31	./.	./.	0/0:2,0:2:5.88:0,6,36	./.	1/1:5,7:12:13.51:183,14,0	0/1:5,2:7:9.93:79,0,10	0/1:3,1:3:18.12:37,0,18	1/1:0,1:1:3.01:30,3,0	./.	./.	./.	./.	0/0:4,0:4:3.31:0,3,34	1/1:1,0:1:1.25:3,1,0	0/0:2,0:2:4.25:0,4,31	0/1:4,2:6:9.42:55,0,9
chr10	8532948	.	T	TA	1099.35	PASS	AB=0.889;AC=33;AF=0.868;AN=38;BaseQRankSum=0.860;DP=183;FS=1.886;HRun=1;HaplotypeScore=112.6045;InbreedingCoeff=0.3045;MQ=110.26;MQ0=9;MQRankSum=-5.790;QD=10.37;ReadPosRankSum=4.071;VQSLOD=1.9303;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:2,0:2:0.91:26,0,1	1/1:1,0:1:1.25:3,1,0	0/1:27,0:12:4.87:5,0,99	0/0:76,0:40:56.43:0,56,484	1/1:1,0:1:3.01:32,3,0	1/1:2,0:2:2.92:7,3,0	./.	1/1:28,2:30:47.31:510,47,0	./.	1/1:1,0:1:2.99:23,3,0	1/1:1,0:1:2.98:22,3,0	0/1:1,1:2:0:0,0,0	./.	./.	1/1:2,0:2:1.77:3,2,0	./.	1/1:11,1:12:25.99:230,26,0	1/1:7,0:7:17.16:112,17,0	1/1:4,0:3:8.90:71,9,0	1/1:1,0:1:3.01:32,3,0	./.	./.	./.	./.	1/1:4,0:4:4.23:11,4,0	1/1:2,0:2:1.55:4,2,0	1/1:2,0:2:3.48:38,3,0	1/1:5,0:5:8.93:71,9,0
chr10	8532949	.	A	AT	861.62	PASS	AB=0.897;AC=32;AF=0.842;AN=38;BaseQRankSum=2.429;DP=176;FS=2.840;HRun=1;HaplotypeScore=109.5879;InbreedingCoeff=0.3031;MQ=112.05;MQ0=9;MQRankSum=-5.855;QD=11.64;ReadPosRankSum=3.667;VQSLOD=2.3340;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:2,0:2:0.63:9,0,1	1/1:0,1:1:2.96:19,3,0	0/0:27,0:12:1.18:0,1,113	0/0:74,0:38:57.92:0,58,485	1/1:1,0:1:2.74:12,3,0	1/1:0,2:2:5.94:41,6,0	./.	0/1:14,7:27:6.80:287,0,7	./.	1/1:1,0:1:1.55:4,2,0	1/1:1,0:1:0.89:2,1,0	1/1:2,0:2:0.47:1,0,0	./.	./.	1/1:0,2:2:5.91:37,6,0	./.	1/1:9,3:12:17.43:158,17,0	1/1:4,2:7:16.54:131,17,0	1/1:3,0:2:5.80:44,6,0	1/1:1,0:1:2.84:14,3,0	./.	./.	./.	./.	1/1:2,2:4:11.88:82,12,0	1/1:1,1:2:2.98:22,3,0	1/1:1,0:1:2.94:18,3,0	1/1:4,1:5:14.48:85,14,0
chr10	8532952	.	TA	T	268.24	PASS	AB=0.955;AC=16;AF=0.421;AN=38;BaseQRankSum=-1.162;DP=170;FS=1.944;HRun=2;HaplotypeScore=107.6374;InbreedingCoeff=0.2353;MQ=108.90;MQ0=8;MQRankSum=-1.970;QD=4.40;ReadPosRankSum=1.627;VQSLOD=0.7380;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,0:2:1.21:19,1,0	1/1:1,0:1:0.47:1,0,0	0/0:26,0:11:0.80:0,1,90	0/0:71,0:35:52.39:0,52,458	0/0:1,0:1:2.22:0,2,7	1/1:2,0:2:0.19:1,0,0	./.	0/1:21,6:27:29.81:201,0,30	./.	0/0:1,0:1:1.55:0,2,4	0/0:1,0:1:2.37:0,2,8	1/1:2,0:2:2.97:20,3,0	./.	./.	0/0:2,0:2:1.36:0,1,3	./.	0/1:12,0:12:6.19:31,0,6	1/1:6,1:7:7.48:71,7,0	0/1:2,0:2:2.73:4,0,3	0/0:1,0:1:2.22:0,2,7	./.	./.	./.	./.	0/1:4,0:4:0.46:1,0,0	1/1:2,0:2:4.22:23,4,0	0/0:1,0:1:0.47:0,0,1	0/0:5,0:5:5.03:0,5,16
chr10	8532953	.	A	AAT	1834.70	PASS	AB=1.000;AC=37;AF=0.974;AN=38;BaseQRankSum=0.560;DP=166;FS=34.840;HRun=0;HaplotypeScore=99.7155;InbreedingCoeff=-0.0538;MQ=110.11;MQ0=8;MQRankSum=-4.444;QD=11.05;ReadPosRankSum=1.986;VQSLOD=1.6345;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,0:2:4.83:55,5,0	1/1:1,0:1:3.01:39,3,0	1/1:26,0:11:8.30:43,8,0	0/1:71,0:35:25.61:26,0,150	1/1:0,1:1:3.01:51,3,0	1/1:2,0:2:6:60,6,0	./.	1/1:21,4:25:56.01:565,56,0	./.	1/1:0,0:1:3.01:45,3,0	1/1:0,0:1:3.01:44,3,0	1/1:1,0:1:1.55:4,2,0	./.	./.	1/1:2,0:2:5.98:46,6,0	./.	1/1:5,6:11:26.84:325,27,0	1/1:6,1:7:17.94:196,18,0	1/1:1,1:2:6.02:81,6,0	1/1:0,1:1:3.01:51,3,0	./.	./.	./.	./.	1/1:4,0:4:11.66:93,12,0	1/1:2,0:2:4.56:43,5,0	1/1:1,0:1:2.74:12,3,0	1/1:3,2:5:14.19:143,14,0
chr10	8532954	.	AT	A	613.08	PASS	AB=0.863;AC=20;AF=0.526;AN=38;BaseQRankSum=0.976;DP=163;FS=15.291;HRun=1;HaplotypeScore=103.2195;InbreedingCoeff=0.0525;MQ=109.32;MQ0=8;MQRankSum=-2.246;QD=9.43;ReadPosRankSum=3.061;VQSLOD=0.1059;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:2,0:2:12.67:33,0,13	1/1:0,1:1:2.90:16,3,0	0/0:25,0:11:3.11:0,3,105	0/0:69,0:34:35.78:0,36,423	0/0:1,0:1:2.97:0,3,20	1/1:0,2:2:5.86:35,6,0	./.	0/1:18,7:25:99:209,0,211	./.	0/0:1,0:1:2.98:0,3,22	0/0:1,0:1:2.99:0,3,24	1/1:1,0:1:3.01:38,3,0	./.	./.	1/1:0,2:2:5.81:31,6,0	./.	0/1:8,3:11:66.59:79,0,67	0/1:5,2:7:3.81:97,0,4	0/1:2,0:2:14.95:23,0,15	0/0:1,0:1:2.98:0,3,21	./.	./.	./.	./.	1/1:2,2:4:11.71:70,12,0	1/1:1,1:2:5.97:58,6,0	1/1:1,0:1:2.88:15,3,0	0/1:4,1:5:26.73:37,0,27
chr10	8532955	.	T	TTA	2572.28	PASS	AB=0.984;AC=36;AF=0.900;AN=40;BaseQRankSum=2.775;DP=191;FS=16.140;HRun=0;HaplotypeScore=120.0558;InbreedingCoeff=0.1695;MQ=101.82;MQ0=8;MQRankSum=-2.960;QD=21.08;ReadPosRankSum=0.771;VQSLOD=2.9660;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,1:3:5.91:55,6,0	1/1:2,0:2:3.01:41,3,0	0/1:25,0:10:18.57:19,0,75	0/0:67,0:34:26.51:0,27,342	1/1:3,0:3:5.95:56,6,0	1/1:3,0:3:6.02:108,6,0	./.	0/1:30,1:31:99:641,0,119	./.	1/1:1,0:1:2.22:7,2,0	1/1:2,0:2:5.69:47,6,0	1/1:0,1:1:3.01:38,3,0	./.	./.	1/1:3,0:3:9.03:157,9,0	1/1:2,0:2:6.02:78,6,0	1/1:11,1:12:23.80:301,24,0	1/1:6,2:8:12.05:215,12,0	1/1:4,1:5:8.77:121,9,0	1/1:3,0:3:5.88:53,6,0	./.	./.	./.	./.	1/1:5,2:7:21.07:325,21,0	1/1:2,1:3:6.02:83,6,0	1/1:2,1:3:9.03:164,9,0	1/1:3,2:5:14.75:178,15,0
chr10	8532966	.	T	TATTAATAAG	6174.79	PASS	AB=0.990;AC=42;AF=0.913;AN=46;BaseQRankSum=-1.180;DP=202;FS=9.546;HRun=0;HaplotypeScore=122.9562;InbreedingCoeff=0.1927;MQ=84.93;MQ0=9;MQRankSum=-2.168;QD=34.11;ReadPosRankSum=0.377;VQSLOD=3.6135;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:4:6.02:134,6,0	1/1:3,0:3:8.96:196,9,0	0/0:18,0:5:2.82:0,3,23	0/1:46,0:21:3.01:3,0,23	1/1:4,1:5:11.87:122,12,0	1/1:3,0:3:9.03:262,9,0	./.	1/1:35,0:35:66.19:1334,66,0	./.	1/1:3,0:3:6.02:98,6,0	1/1:5,1:6:12.03:159,12,0	1/1:1,0:1:3.01:78,3,0	1/1:2,0:2:2.94:18,3,0	1/1:2,0:1:3.01:39,3,0	1/1:5,0:5:12.04:242,12,0	0/1:6,0:6:17.76:154,0,18	1/1:10,2:12:26.94:609,27,0	1/1:8,0:8:18.06:617,18,0	1/1:6,0:6:18.05:345,18,0	1/1:4,0:4:6.02:90,6,0	./.	./.	./.	1/1:2,0:2:3.01:36,3,0	1/1:7,0:7:21.07:560,21,0	1/1:6,0:6:17.96:391,18,0	1/1:6,0:6:17.97:322,18,0	1/1:5,0:5:9.03:367,9,0
chr10	8532990	.	GACACACACACACACACACACAC	G	6828.33	PASS	AB=0.667;AC=29;AF=0.537;AN=54;BaseQRankSum=5.395;DP=194;FS=0.000;HRun=0;HaplotypeScore=122.0871;InbreedingCoeff=0.5472;MQ=50.04;MQ0=18;MQRankSum=-0.977;QD=79.40;ReadPosRankSum=4.022;VQSLOD=4.4245;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,2:5:8.03:367,8,0	1/1:2,3:5:12:523,12,0	0/0:12,0:1:0.47:0,0,1	0/0:18,0:6:6.02:0,6,247	1/1:3,5:8:15.05:598,15,0	1/1:1,2:3:6.02:349,6,0	1/1:1,0:1:3.01:39,3,0	0/0:22,0:21:18.04:0,18,486	1/1:0,0:1:3.01:154,3,0	0/1:1,0:2:99:148,0,115	1/1:2,0:6:12.04:614,12,0	0/0:0,0:5:15.05:0,15,801	0/0:1,0:6:15.05:0,15,827	0/0:3,0:5:8.77:0,9,500	1/1:0,0:5:15.05:768,15,0	1/1:1,4:6:15.05:852,15,0	1/1:6,4:10:15.03:600,15,0	1/1:5,1:6:12.04:295,12,0	0/0:8,0:10:24.08:0,24,942	0/0:5,0:10:12.04:0,12,662	0/0:5,0:3:3.01:0,3,152	./.	1/1:1,0:5:3.01:154,3,0	0/1:1,0:5:99:148,0,178	1/1:3,6:8:24:1087,24,0	0/1:5,0:7:99:132,0,881	0/0:5,0:8:9.03:0,9,460	0/0:3,0:4:6.02:0,6,343
chr10	8535675	.	CT	C	20960.26	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=12.998;DP=772;FS=0.000;HRun=1;HaplotypeScore=73.8889;InbreedingCoeff=0.9909;MQ=82.64;MQ0=0;MQRankSum=-5.571;QD=38.60;ReadPosRankSum=3.971;VQSLOD=5.4015;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,38:38:99:1384,99,0	1/1:0,14:14:39.13:545,39,0	0/0:20,0:20:59.97:0,60,874	0/0:26,0:26:78.23:0,78,1212	1/1:0,41:41:99:1618,117,0	1/1:0,20:20:57.19:790,57,0	1/1:0,23:23:60.20:839,60,0	1/1:0,37:37:99:1534,111,0	1/1:0,37:37:99:1416,102,0	0/0:29,0:29:87.29:0,87,1372	0/0:41,0:41:99:0,123,1943	1/1:0,23:23:66.22:923,66,0	1/1:0,34:34:93.31:1300,93,0	1/1:0,21:21:60.20:838,60,0	0/0:43,0:43:99:0,129,2042	1/1:0,28:28:81.27:1133,81,0	1/1:0,20:20:54.18:755,54,0	1/1:0,20:20:57.19:797,57,0	1/1:0,20:20:60.19:824,60,0	1/1:0,35:35:99:1433,105,0	1/1:0,22:22:51.17:713,51,0	0/0:27,0:27:81.26:0,81,1269	0/0:19,0:19:57.19:0,57,911	0/0:24,0:24:72.23:0,72,1122	1/1:0,22:22:54.18:750,54,0	1/1:2,33:35:9.34:1235,9,0	1/1:0,40:40:99:1593,114,0	1/1:0,13:13:39.13:541,39,0
chr10	8537131	.	ATGGATG	A	14285.49	PASS	AB=0.527;AC=21;AF=0.375;AN=56;BaseQRankSum=16.115;DP=695;FS=10.887;HRun=0;HaplotypeScore=153.1414;InbreedingCoeff=0.9148;MQ=88.87;MQ0=0;MQRankSum=-17.895;QD=54.52;ReadPosRankSum=0.548;VQSLOD=4.7155;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,151,5389	0/0:9,0:9:27.09:0,27,974	0/0:36,0:37:99:0,108,3340	0/0:22,0:22:57.67:0,58,1966	0/0:19,0:19:57.20:0,57,2019	0/0:18,0:18:54.19:0,54,1830	0/0:22,0:22:63.22:0,63,2270	1/1:3,22:25:66.23:1441,66,0	1/1:1,21:22:48.16:1150,48,0	0/0:31,0:31:84.29:0,84,2997	0/0:14,0:14:39.13:0,39,1406	1/1:2,22:24:54.19:1297,54,0	1/1:3,32:35:81.28:1945,81,0	1/1:0,26:26:75.26:1798,75,0	0/0:27,0:27:78.27:0,78,2807	0/0:35,0:35:99:0,99,3485	0/0:19,0:19:54.19:0,54,1909	0/0:20,0:20:60.16:0,60,1982	1/1:3,17:20:51.16:1089,51,0	1/1:2,28:30:72.25:1729,72,0	1/1:6,7:13:9.03:216,9,0	0/0:23,0:23:69.24:0,69,2212	0/0:16,0:16:48.16:0,48,1691	0/0:37,0:37:99:0,102,3622	0/0:32,0:32:93.32:0,93,3353	0/1:4,35:39:99:2109,0,108	1/1:2,17:19:36.12:861,36,0	1/1:0,9:9:27.09:649,27,0
chr10	8537286	.	T	TACAC	2860.60	PASS	AB=1.000;AC=40;AF=0.800;AN=50;BaseQRankSum=-0.219;DP=548;FS=1.194;HRun=0;HaplotypeScore=119.9210;InbreedingCoeff=0.3816;MQ=66.18;MQ0=8;MQRankSum=-0.669;QD=6.88;ReadPosRankSum=-0.811;VQSLOD=2.3345;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:34,0:33:9.01:129,9,0	1/1:10,2:13:6.02:133,6,0	./.	./.	1/1:21,0:21:17.67:245,18,0	1/1:17,0:17:9.02:131,9,0	1/1:19,0:19:3.48:45,3,0	1/1:24,0:24:3.46:24,3,0	1/1:21,0:22:8.73:74,9,0	./.	0/0:13,0:13:6.48:0,6,93	1/1:11,0:11:6.02:114,6,0	1/1:9,5:16:3.01:70,3,0	1/1:16,0:15:15.02:197,15,0	0/1:21,0:21:5.94:6,0,151	1/1:28,2:31:21.89:425,22,0	1/1:21,1:22:21.03:334,21,0	1/1:14,0:14:15:251,15,0	1/1:18,0:18:3.90:67,4,0	1/1:12,4:20:9.03:174,9,0	1/1:25,0:22:14.56:258,15,0	0/0:21,0:21:5.90:0,6,72	0/0:14,0:14:3.48:0,3,47	0/1:26,0:28:25.89:26,0,190	0/0:17,0:17:0.47:0,0,1	1/1:20,0:20:12.03:205,12,0	1/1:13,4:18:5.75:82,6,0	1/1:5,0:5:0.47:1,0,0
chr10	8538008	.	G	GT	443.80	PASS	AB=1.000;AC=24;AF=0.571;AN=42;BaseQRankSum=-3.382;DP=69;FS=18.589;HRun=0;HaplotypeScore=18.3749;InbreedingCoeff=0.3789;MQ=115.56;MQ0=1;MQRankSum=-1.096;QD=13.45;ReadPosRankSum=-2.086;VQSLOD=1.3294;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:5,0:5:8.67:9,0,13	1/1:2,0:2:5.81:32,6,0	0/0:11,0:7:5.69:0,6,112	0/0:13,0:9:13.90:0,14,67	1/1:2,0:2:2.99:24,3,0	1/1:5,0:5:2.87:15,3,0	0/1:4,0:4:1.75:42,0,2	1/1:0,6:6:18.03:221,18,0	1/1:2,0:2:4.82:36,5,0	0/0:3,0:3:5.89:0,6,56	./.	1/1:1,0:1:3:25,3,0	1/1:1,0:1:3:25,3,0	1/1:1,0:1:3.01:39,3,0	0/0:3,0:3:6:0,6,53	0/0:3,0:3:2.92:0,3,19	./.	0/0:1,0:1:2.84:0,3,14	1/1:1,0:1:3:27,3,0	./.	./.	./.	0/0:1,0:1:3.01:0,3,42	0/0:1,0:1:3.01:0,3,42	./.	1/1:2,0:2:6.01:63,6,0	1/1:1,0:1:2.99:23,3,0	./.
chr10	8538595	.	ACG	A	18166.36	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=11.387;DP=690;FS=2.778;HRun=0;HaplotypeScore=91.4801;InbreedingCoeff=0.9898;MQ=91.18;MQ0=1;MQRankSum=-4.352;QD=36.12;ReadPosRankSum=2.457;VQSLOD=6.8797;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,43:43:99:1633,114,0	1/1:0,3:3:9.03:129,9,0	0/0:27,0:27:67.42:0,67,1085	0/0:26,0:26:25.27:0,25,836	1/1:1,20:21:26.11:638,26,0	1/1:1,20:21:57.19:817,57,0	1/1:1,23:24:60.20:860,60,0	1/1:4,31:35:90.23:1198,90,0	1/1:2,15:17:36.12:516,36,0	0/0:27,0:27:75.26:0,75,1365	0/0:22,0:22:66.15:0,66,1138	1/1:0,23:23:57.14:817,57,0	1/1:2,36:38:81.07:1160,81,0	1/1:0,30:29:78.26:1116,78,0	0/0:23,0:23:63.22:0,63,1154	1/1:0,35:35:90.30:1290,90,0	1/1:1,34:35:96.32:1376,96,0	1/1:0,19:19:45.15:645,45,0	1/1:1,23:24:69.23:986,69,0	1/1:1,29:30:84.23:1166,84,0	1/1:1,24:25:63.21:903,63,0	0/0:17,0:17:51.12:0,51,859	0/0:20,0:20:57.20:0,57,1043	0/0:25,0:25:72.25:0,72,1318	1/1:1,22:23:60.20:860,60,0	1/1:2,16:18:51.17:728,51,0	1/1:1,24:25:60.20:860,60,0	1/1:1,13:14:33.11:472,33,0
chr10	8539128	.	TA	T	904.94	PASS	AB=0.838;AC=20;AF=0.357;AN=56;BaseQRankSum=-1.622;DP=564;FS=1.000;HRun=16;HaplotypeScore=70.2263;InbreedingCoeff=0.5635;MQ=74.96;MQ0=8;MQRankSum=-0.145;QD=4.44;ReadPosRankSum=3.894;VQSLOD=1.2619;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,8:12:12.05:62,12,0	1/1:2,4:7:13.76:78,14,0	0/0:43,1:21:20.87:0,21,155	0/1:28,0:10:8.35:8,0,22	1/1:9,14:23:3.61:126,4,0	1/1:5,14:20:34.24:203,34,0	1/1:5,13:18:10.09:172,10,0	0/0:20,0:20:12.40:0,12,201	0/1:11,0:12:3.57:4,0,103	0/0:25,0:31:62.01:0,62,395	0/0:9,1:26:22.72:0,23,202	0/0:27,0:28:37.35:0,37,350	0/0:16,1:21:14.45:0,14,191	0/0:21,0:21:14.74:0,15,203	0/0:8,0:25:46.06:0,46,266	1/1:4,11:15:4.27:136,4,0	0/1:3,9:13:5.87:76,0,6	1/1:4,6:10:14.60:89,15,0	0/1:16,3:19:27.03:27,0,111	0/0:25,0:29:44.51:0,45,337	0/0:6,1:8:1.04:0,1,96	0/0:4,0:10:19.95:0,20,101	0/0:3,0:10:11.36:0,11,57	0/0:2,0:4:2.84:0,3,14	1/1:12,14:26:1.47:107,1,0	0/0:21,0:23:35.67:0,36,276	0/0:31,2:33:47.34:0,47,473	0/0:26,1:27:23.86:0,24,292
chr10	8541305	.	CGTGTGTGTGT	C	8183.67	PASS	AB=0.882;AC=48;AF=0.857;AN=56;BaseQRankSum=3.246;DP=341;FS=0.000;HRun=0;HaplotypeScore=128.7952;InbreedingCoeff=0.2481;MQ=52.71;MQ0=8;MQRankSum=-0.793;QD=26.06;ReadPosRankSum=2.058;VQSLOD=4.1541;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:13,1:15:15.24:84,0,15	1/1:0,0:4:12.02:119,12,0	0/0:16,0:12:3.01:0,3,150	0/0:11,0:5:2.97:0,3,20	0/1:6,0:7:15.93:50,0,16	1/1:9,0:15:10.44:116,10,0	1/1:8,0:12:12.01:131,12,0	1/1:19,0:20:3.31:15,3,0	1/1:4,4:8:6.02:180,6,0	1/1:3,8:11:21.07:629,21,0	1/1:5,9:14:24.08:671,24,0	1/1:8,0:18:21.07:489,21,0	1/1:6,0:13:21.07:489,21,0	1/1:5,0:12:21.07:489,21,0	1/1:4,12:17:30.10:880,30,0	1/1:5,2:12:24.05:359,24,0	1/1:6,0:8:3.01:30,3,0	0/1:9,0:11:49.99:77,0,50	0/1:13,0:12:0:0,0,0	1/1:4,0:13:24.08:559,24,0	1/1:10,0:11:3.01:70,3,0	1/1:1,6:7:9.03:263,9,0	1/1:3,10:14:23.74:690,24,0	1/1:8,4:12:9.03:257,9,0	1/1:5,0:11:15.03:209,15,0	1/1:6,0:14:21.54:490,22,0	1/1:2,0:9:21.07:489,21,0	1/1:6,0:8:15.05:349,15,0
chr10	8541423	.	TTATACATACATACATACATACATA	T	1446.97	PASS	AB=1.000;AC=17;AF=0.340;AN=50;BaseQRankSum=1.732;DP=167;FS=0.917;HRun=0;HaplotypeScore=95.2542;InbreedingCoeff=0.7109;MQ=69.05;MQ0=3;MQRankSum=0.491;QD=40.19;ReadPosRankSum=-1.863;VQSLOD=2.1286;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:15.05:0,15,709	0/0:5,0:5:12.04:0,12,715	0/0:5,0:3:6.02:0,6,149	0/0:19,0:8:12.03:0,12,194	0/0:9,0:9:24.07:0,24,882	0/0:7,0:7:14.94:0,15,806	0/0:6,0:6:18.06:0,18,642	1/1:10,0:10:24.07:588,24,0	0/0:4,0:4:12.04:0,12,623	0/0:4,0:4:6.90:0,7,89	0/0:5,0:5:9:0,9,100	1/1:1,0:1:3:25,3,0	1/1:4,0:4:9.01:123,9,0	1/1:0,3:3:3.01:195,3,0	0/0:3,0:3:5.99:0,6,50	0/0:7,0:7:21.07:0,21,1423	0/0:13,0:13:24.06:0,24,1417	0/0:11,0:11:24.04:0,24,1215	1/1:3,0:3:3.01:67,3,0	./.	./.	0/0:4,0:4:3:0,3,25	./.	0/1:4,0:4:0:0,0,0	0/0:15,0:15:39.13:0,39,1984	1/1:3,0:3:3.01:55,3,0	1/1:3,0:3:9:169,9,0	1/1:4,1:5:15:390,15,0
chr10	8541426	.	TACATACATACATACATAC	T	1323.64	PASS	AB=1.000;AC=17;AF=0.340;AN=50;BaseQRankSum=1.910;DP=154;FS=0.914;HRun=0;HaplotypeScore=71.2284;InbreedingCoeff=0.7087;MQ=69.74;MQ0=3;MQRankSum=-0.771;QD=44.12;ReadPosRankSum=-2.204;VQSLOD=2.1424;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:15.05:0,15,598	0/0:5,0:5:12.04:0,12,591	0/0:5,0:3:6.02:0,6,149	0/0:19,0:8:12.03:0,12,202	0/0:9,0:9:24.07:0,24,820	0/0:8,0:8:12.04:0,12,642	0/0:6,0:6:18.06:0,18,642	1/1:1,8:9:24.07:588,24,0	0/0:4,0:4:12.04:0,12,569	0/0:3,0:3:6.90:0,7,89	0/0:5,0:5:9:0,9,100	1/1:1,0:1:3:25,3,0	1/1:4,0:4:9.01:123,9,0	1/1:3,0:3:3.01:133,3,0	0/0:3,0:3:5.99:0,6,50	0/0:7,0:7:21.07:0,21,1164	0/0:12,0:12:24.06:0,24,1128	0/0:11,0:11:24.51:0,25,1033	1/1:0,1:1:3.01:67,3,0	./.	./.	0/0:1,0:1:3:0,3,25	./.	0/1:3,0:3:0:0,0,0	0/0:15,0:15:39.13:0,39,1779	1/1:1,0:1:3.01:55,3,0	1/1:3,0:3:9:169,9,0	1/1:5,0:5:15:328,15,0
chr10	8541444	.	CATAT	C	373.50	PASS	AB=0.764;AC=13;AF=0.464;AN=28;BaseQRankSum=-0.194;DP=117;FS=0.000;HRun=0;HaplotypeScore=38.5298;InbreedingCoeff=0.1651;MQ=56.08;MQ0=5;MQRankSum=-1.747;QD=6.44;ReadPosRankSum=1.969;VQSLOD=0.9924;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:3,0:3:2.22:0,2,7	./.	0/0:16,0:5:1.82:0,2,5	1/1:3,1:4:3.01:44,3,0	1/1:4,0:7:1.55:4,2,0	./.	0/0:10,0:10:5.87:0,6,36	0/0:1,0:1:2.99:0,3,24	0/0:1,0:1:2.98:0,3,22	./.	./.	./.	1/1:3,0:3:3:26,3,0	./.	1/1:3,3:6:9.03:144,9,0	1/1:14,0:14:5.96:47,6,0	0/1:4,7:11:6.05:131,0,6	./.	./.	./.	./.	./.	./.	0/1:5,0:9:9.04:61,0,9	./.	0/0:2,0:2:2.98:0,3,22	0/1:3,0:3:17.49:21,0,17
chr10	8542623	.	C	CA	10808.21	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-4.208;DP=559;FS=0.000;HRun=1;HaplotypeScore=99.8461;InbreedingCoeff=0.9984;MQ=87.55;MQ0=0;MQRankSum=-3.950;QD=38.46;ReadPosRankSum=2.295;VQSLOD=5.0383;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,21:22:54.04:733,54,0	1/1:2,9:11:24.08:360,24,0	0/0:25,0:24:71.92:0,72,866	0/0:33,0:29:90.16:0,90,1063	1/1:2,17:19:57.18:830,57,0	1/1:1,16:17:48.13:695,48,0	1/1:1,23:24:66.18:963,66,0	0/0:27,0:27:81.24:0,81,1024	0/0:14,0:14:33.11:0,33,428	1/1:2,17:19:54.13:750,54,0	1/1:5,10:15:30.06:424,30,0	0/0:21,0:21:63.20:0,63,816	0/0:17,0:17:47.18:0,47,588	0/0:24,0:24:63.20:0,63,815	1/1:2,18:20:52.22:805,52,0	1/1:1,24:26:69.05:1010,69,0	1/1:1,21:22:58.08:871,58,0	1/1:0,10:10:30.10:449,30,0	0/0:12,0:12:36.11:0,36,454	0/0:29,0:29:87.23:0,87,1108	0/0:24,0:24:69.21:0,69,880	1/1:4,15:19:51.16:735,51,0	1/1:3,16:19:54.10:754,54,0	1/1:0,19:19:51.04:757,51,0	1/1:1,18:19:45.15:674,45,0	0/0:20,0:20:54.18:0,54,700	0/0:26,0:26:66.19:0,66,840	0/0:6,0:6:18.06:0,18,234
chr10	8543375	.	CATTT	C	286.41	PASS	AC=10;AF=0.227;AN=44;BaseQRankSum=4.488;DP=164;FS=0.000;HRun=0;HaplotypeScore=36.7093;InbreedingCoeff=0.6355;MQ=88.52;MQ0=3;MQRankSum=-2.668;QD=20.46;ReadPosRankSum=0.910;VQSLOD=3.0187;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:11:27.06:0,27,605	0/0:2,0:2:6.02:0,6,125	0/0:24,0:12:36.12:0,36,866	0/0:16,0:8:0.11:0,0,304	./.	0/0:3,0:3:6.02:0,6,174	0/0:3,0:3:9.03:0,9,246	1/1:2,1:3:3.01:59,3,0	0/0:7,0:7:21.07:0,21,533	0/0:8,0:8:21.03:0,21,541	0/0:10,0:10:27.09:0,27,720	./.	1/1:1,0:1:3.01:44,3,0	1/1:0,4:4:12.04:231,12,0	0/0:10,0:10:30.09:0,30,794	0/0:4,0:4:12.04:0,12,333	0/0:3,0:3:9.03:0,9,245	0/0:2,0:2:6.02:0,6,151	./.	./.	1/1:0,4:4:2.97:20,3,0	0/0:14,0:14:36.12:0,36,936	0/0:8,0:8:24.05:0,24,567	0/0:19,0:19:47.69:0,48,1201	0/0:6,0:6:15.92:0,16,259	./.	1/1:0,2:2:2.95:59,3,0	./.
chr10	8547293	.	AAAAT	A	221.76	PASS	AB=0.957;AC=9;AF=0.161;AN=56;BaseQRankSum=10.215;DP=486;FS=25.864;HRun=0;HaplotypeScore=85.6122;InbreedingCoeff=-0.1936;MQ=64.75;MQ0=3;MQRankSum=-4.702;QD=1.98;ReadPosRankSum=5.868;VQSLOD=-0.1528;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,1:33:36.17:0,36,473	0/0:7,0:7:14.22:0,14,132	0/0:28,0:6:11.97:0,12,142	0/0:21,0:10:15.47:0,15,194	0/0:24,0:24:48.19:0,48,600	0/0:20,0:20:43.93:0,44,393	0/0:18,0:18:23.73:0,24,342	0/1:18,1:19:44.10:44,0,240	0/1:10,1:11:68.01:69,0,68	0/0:20,0:20:60.13:0,60,845	0/0:21,0:21:59.78:0,60,803	0/1:8,0:8:3.89:4,0,104	0/1:8,0:8:27.98:28,0,35	0/1:7,0:7:3.72:4,0,92	0/0:18,0:17:20.64:0,21,273	0/0:25,0:25:56.96:0,57,693	0/0:22,0:22:34.94:0,35,434	0/0:33,0:33:59.86:0,60,684	0/0:14,0:13:5.53:0,6,208	0/1:21,0:21:85.50:96,0,86	0/1:4,2:6:31.42:31,0,55	0/0:15,0:15:44.79:0,45,664	0/0:17,0:17:42.08:0,42,617	0/0:12,0:12:24.95:0,25,354	0/0:20,0:20:29.24:0,29,435	0/1:18,0:18:8.82:9,0,211	0/1:14,0:14:67.51:68,0,142	0/0:6,0:6:1.19:0,1,47
chr10	8549414	.	C	CT	11611.47	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-12.111;DP=711;FS=0.601;HRun=6;HaplotypeScore=67.5150;InbreedingCoeff=0.9977;MQ=80.30;MQ0=0;MQRankSum=-1.987;QD=31.05;ReadPosRankSum=2.189;VQSLOD=5.4551;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,28:28:75.24:943,75,0	1/1:1,7:8:21.07:264,21,0	0/0:25,0:25:38.95:0,39,598	0/0:15,0:15:32.93:0,33,326	1/1:1,28:29:78.17:946,78,0	1/1:3,18:21:48.15:604,48,0	1/1:3,21:23:63.13:773,63,0	0/0:39,0:39:96.15:0,96,945	0/0:20,0:20:54.10:0,54,543	1/1:4,29:32:87.22:1061,87,0	1/1:1,26:27:69.18:850,69,0	0/0:28,0:28:69.15:0,69,704	0/0:31,0:31:75.14:0,75,755	0/0:25,0:25:72.15:0,72,727	1/1:2,27:29:81.26:1019,81,0	1/1:2,22:24:57.18:717,57,0	1/1:5,24:29:60.19:755,60,0	1/1:2,12:14:30.10:377,30,0	0/0:19,0:19:16.36:0,16,372	0/0:27,0:27:66.10:0,66,658	0/0:20,0:20:57.11:0,57,574	1/1:6,25:31:78.17:939,78,0	1/1:5,20:25:63.19:777,63,0	1/1:1,18:19:42.13:528,42,0	1/1:2,31:32:84.27:1057,84,0	0/0:34,0:34:99:0,99,989	0/0:40,0:39:99:0,102,1016	0/0:14,0:14:39.09:0,39,398
chr10	8550320	.	TAC	T	1105.84	PASS	AB=0.940;AC=28;AF=0.538;AN=52;BaseQRankSum=0.358;DP=638;FS=55.543;HRun=0;HaplotypeScore=96.8237;InbreedingCoeff=0.0967;MQ=68.32;MQ0=10;MQRankSum=-0.145;QD=2.72;ReadPosRankSum=3.092;VQSLOD=-0.5981;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:35:2.89:0,3,45	1/1:2,0:2:0.47:1,0,0	./.	./.	0/1:19,0:20:19.07:19,0,83	0/0:8,0:17:2.60:0,3,10	0/1:30,0:32:23.93:24,0,94	1/1:20,1:19:3:30,3,0	0/1:16,1:18:36.74:37,0,73	0/1:14,0:25:1.78:2,0,153	1/1:6,0:7:1.24:4,1,0	1/1:18,9:29:10.91:162,11,0	0/1:10,5:15:27.13:27,0,27	1/1:9,10:21:17.32:168,17,0	0/0:22,0:29:35.77:0,36,309	0/0:20,0:20:19.64:0,20,159	0/0:13,0:29:13.98:0,14,252	0/1:22,0:23:0.43:0,0,145	1/1:10,1:13:8.22:55,8,0	1/1:8,4:12:4.25:35,4,0	0/1:51,2:53:99:252,0,144	0/0:14,0:14:9:0,9,108	0/0:11,0:16:5.60:0,6,36	0/1:26,2:48:23.66:24,0,355	0/1:16,0:17:27.84:28,0,45	0/1:15,2:18:14.99:68,0,15	1/1:10,5:16:9.02:98,9,0	1/1:5,7:13:23.88:232,24,0
chr10	8550937	.	T	TAAA	8425.43	PASS	AB=0.670;AC=49;AF=0.875;AN=56;BaseQRankSum=-4.957;DP=652;FS=2.790;HRun=10;HaplotypeScore=108.4370;InbreedingCoeff=0.2014;MQ=69.46;MQ0=5;MQRankSum=0.877;QD=14.02;ReadPosRankSum=2.956;VQSLOD=2.6072;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,19:26:30.04:489,30,0	1/1:3,9:12:12.04:209,12,0	0/0:51,0:24:22.13:0,22,228	0/1:45,0:22:16.88:17,0,152	1/1:8,26:40:89.67:1220,90,0	1/1:1,14:16:24.08:456,24,0	1/1:4,14:20:21.05:369,21,0	1/1:10,0:32:32.33:114,32,0	0/1:4,0:20:16.26:36,0,16	1/1:4,21:25:57.57:900,58,0	1/1:2,19:23:44.34:687,44,0	1/1:4,0:15:14.02:36,14,0	1/1:7,0:15:10.75:25,11,0	0/1:4,0:20:13.94:14,0,17	1/1:1,16:21:24.55:462,25,0	1/1:3,23:27:28.34:522,28,0	1/1:5,26:34:36.11:643,36,0	1/1:3,21:24:24.08:460,24,0	0/1:6,0:15:5.16:98,0,5	1/1:2,0:30:35.99:131,36,0	1/1:1,0:13:11.52:27,12,0	1/1:0,10:10:27.05:456,27,0	1/1:5,14:19:12.12:149,12,0	1/1:4,13:16:16.61:293,17,0	1/1:7,22:29:27.09:502,27,0	0/1:11,0:30:20.04:38,0,20	1/1:5,0:21:6.23:68,6,0	1/1:1,0:2:1.25:3,1,0
chr10	8554142	.	AATATAG	A	3870.15	PASS	AC=48;AF=0.923;AN=52;BaseQRankSum=-1.527;DP=437;FS=7.487;HRun=0;HaplotypeScore=110.3858;InbreedingCoeff=0.5482;MQ=71.71;MQ0=4;MQRankSum=0.430;QD=9.63;ReadPosRankSum=0.604;VQSLOD=1.7773;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:16:20.96:171,21,0	1/1:8,0:8:8.94:67,9,0	./.	0/0:17,0:10:1.25:0,1,3	1/1:22,0:22:32.91:268,33,0	1/1:14,0:14:20.97:176,21,0	1/1:12,0:12:26.70:199,27,0	1/1:46,0:44:11.98:101,12,0	0/0:7,0:7:11.99:0,12,100	1/1:20,0:20:29.96:263,30,0	1/1:23,0:23:35.93:296,36,0	1/1:12,0:12:17.98:151,18,0	1/1:14,0:14:17.97:148,18,0	1/1:18,0:18:13.21:117,13,0	1/1:10,0:10:23.84:187,24,0	1/1:10,0:10:11.85:88,12,0	1/1:27,0:27:38.72:293,39,0	1/1:23,0:23:17.95:263,18,0	1/1:18,4:22:8.99:75,9,0	1/1:21,0:20:26.47:162,26,0	1/1:5,0:5:3:27,3,0	1/1:5,0:5:5.99:48,6,0	1/1:10,0:10:6:52,6,0	./.	1/1:17,0:17:21:183,21,0	1/1:22,0:22:29.94:244,30,0	1/1:23,0:22:32.93:270,33,0	1/1:2,0:2:2.99:24,3,0
chr10	8554179	.	ATATAGATATAGGTATAGG	A	4573.20	PASS	AB=1.000;AC=36;AF=0.667;AN=54;BaseQRankSum=-6.318;DP=449;FS=7.380;HRun=0;HaplotypeScore=199.8982;InbreedingCoeff=-0.1860;MQ=50.67;MQ0=53;MQRankSum=5.028;QD=10.54;ReadPosRankSum=7.251;VQSLOD=1.8176;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:14,0:11:76.56:139,0,77	0/1:10,0:8:24.94:25,0,186	./.	0/0:3,0:1:0.89:0,1,2	0/1:28,0:22:99:135,0,174	0/1:16,0:13:99:119,0,182	1/1:18,0:12:25.74:194,26,0	1/1:32,0:18:11.93:101,12,0	0/0:11,0:11:15.88:0,16,198	0/1:34,0:31:99:149,0,900	0/1:28,0:22:66.39:235,0,66	1/1:11,0:8:21.01:299,21,0	1/1:10,0:9:27.02:326,27,0	1/1:12,0:11:3.67:224,4,0	0/1:13,0:12:71.97:118,0,72	0/1:9,0:9:66.93:67,0,117	0/1:29,0:25:99:161,0,257	0/1:21,0:17:99:213,0,177	1/1:13,0:11:14.98:181,15,0	1/1:1,28:27:17.64:148,18,0	1/1:7,0:6:10.33:174,10,0	0/1:7,0:5:11.98:12,0,114	0/1:16,0:14:12.35:12,0,134	0/1:2,0:2:0:0,0,0	0/1:21,0:17:99:140,0,316	1/1:5,22:24:40.07:727,40,0	1/1:20,0:16:41.98:467,42,0	1/1:7,0:7:13.34:210,13,0
chr10	8557793	.	TGTCCACGCTG	T	10523.19	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=14.445;DP=539;FS=5.015;HRun=0;HaplotypeScore=165.2543;InbreedingCoeff=0.9804;MQ=72.48;MQ0=0;MQRankSum=-15.347;QD=64.17;ReadPosRankSum=3.158;VQSLOD=4.2601;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,17:19:27.09:909,27,0	1/1:0,10:10:27.09:882,27,0	0/0:18,0:15:39.13:0,39,1934	0/0:22,0:22:60.09:0,60,2402	1/1:1,17:18:27.56:916,28,0	1/1:0,26:26:63.69:2124,64,0	1/1:3,21:24:42.14:1348,42,0	0/0:31,0:31:90.27:0,90,4103	1/1:1,6:7:15.05:509,15,0	0/0:30,0:30:90.31:0,90,4779	0/0:15,0:15:45.15:0,45,2298	0/0:25,0:25:75.26:0,75,3746	0/0:25,0:25:75.20:0,75,3717	0/0:21,0:21:60.19:0,60,2871	0/0:28,0:28:84.29:0,84,4274	1/1:0,15:15:33.11:1119,33,0	1/1:1,11:12:21.07:712,21,0	1/1:5,11:16:21.07:683,21,0	0/0:12,0:12:36.12:0,36,1920	0/0:13,0:13:36.12:0,36,1838	0/0:24,0:24:69.24:0,69,3626	0/0:21,0:21:63.22:0,63,3308	0/0:12,0:12:36.11:0,36,1799	0/0:28,0:28:81.28:0,81,4235	1/1:0,17:17:39.13:1320,39,0	0/0:25,0:24:69.71:0,70,3580	0/0:23,0:23:69.22:0,69,3366	0/0:2,0:2:6.02:0,6,323
chr10	8560195	.	AAGTCAC	A	3125.39	PASS	AC=30;AF=0.625;AN=48;BaseQRankSum=8.101;DP=602;FS=2.200;HRun=0;HaplotypeScore=147.2561;InbreedingCoeff=0.8525;MQ=80.21;MQ0=1;MQRankSum=-8.487;QD=9.71;ReadPosRankSum=-1.139;VQSLOD=2.4894;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:27,11:38:9.03:178,9,0	1/1:4,6:10:12.04:237,12,0	./.	./.	1/1:13,5:18:15.05:287,15,0	1/1:12,8:20:12.04:237,12,0	1/1:17,14:31:3.01:56,3,0	./.	1/1:17,6:23:15.05:297,15,0	1/1:13,0:25:21.07:294,21,0	1/1:9,0:18:21.06:278,21,0	0/0:14,0:14:21.07:0,21,666	0/0:24,0:24:39.10:0,39,1147	0/0:15,0:15:18.06:0,18,523	1/1:19,0:28:18.06:251,18,0	1/1:10,10:20:15.05:297,15,0	1/1:19,8:27:12.04:218,12,0	1/1:11,4:15:9.03:178,9,0	0/0:10,0:10:9.03:0,9,286	0/0:19,0:18:18.06:0,18,564	0/0:29,0:29:33.11:0,33,926	1/1:9,0:13:9.03:126,9,0	1/1:9,0:13:6.02:84,6,0	./.	1/1:14,9:23:15.05:297,15,0	0/0:16,0:20:33.04:0,33,745	0/0:28,0:34:23.87:0,24,572	0/0:4,0:4:3.01:0,3,64
chr10	8563512	.	G	GACAC	6407.82	PASS	AB=0.800;AC=51;AF=0.911;AN=56;BaseQRankSum=-0.636;DP=705;FS=6.072;HRun=0;HaplotypeScore=216.9152;InbreedingCoeff=0.2816;MQ=55.90;MQ0=12;MQRankSum=-1.128;QD=10.34;ReadPosRankSum=0.586;VQSLOD=3.7279;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:33,0:31:3.01:57,3,0	1/1:7,0:9:9.03:156,9,0	0/0:41,0:24:3.01:0,3,48	0/0:43,0:19:3:0,3,43	1/1:22,0:25:6.02:104,6,0	1/1:14,14:32:41.35:827,41,0	1/1:9,5:18:17.53:312,18,0	1/1:26,0:25:16.77:295,17,0	1/1:23,0:26:15.05:254,15,0	1/1:32,0:32:34.65:523,35,0	1/1:20,0:20:6.01:101,6,0	1/1:18,0:17:9.02:118,9,0	1/1:31,0:34:42.10:646,42,0	1/1:26,0:28:12.04:171,12,0	1/1:25,0:24:20.95:350,21,0	1/1:14,0:30:39.13:680,39,0	0/1:12,0:16:9.08:47,0,9	1/1:11,0:11:12.04:191,12,0	1/1:21,0:20:16.73:226,17,0	1/1:25,0:25:3.01:39,3,0	1/1:24,0:22:2.77:24,3,0	1/1:16,1:20:3.01:52,3,0	1/1:20,0:18:2.31:22,2,0	1/1:30,0:29:11.41:233,11,0	1/1:20,0:25:9.01:128,9,0	1/1:23,0:24:16.86:235,17,0	1/1:28,0:28:32.88:502,33,0	1/1:10,0:12:6.49:113,6,0
chr10	8563531	.	A	ACA	1842.92	PASS	AB=1.000;AC=49;AF=0.907;AN=54;BaseQRankSum=-1.006;DP=720;FS=11.687;HRun=0;HaplotypeScore=159.6944;InbreedingCoeff=0.1766;MQ=49.72;MQ0=14;MQRankSum=-0.342;QD=3.04;ReadPosRankSum=2.293;VQSLOD=1.9077;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:28,5:32:2.99:24,3,0	1/1:10,0:10:6:52,6,0	0/0:47,0:21:2.99:0,3,34	0/0:44,0:19:2.59:0,3,33	1/1:29,0:27:5.98:53,6,0	1/1:27,0:27:42.02:426,42,0	1/1:23,0:23:15.02:171,15,0	1/1:26,0:25:1.72:4,2,0	1/1:28,0:28:9:78,9,0	1/1:30,0:30:11.52:82,12,0	1/1:23,0:23:5.80:50,6,0	1/1:24,0:23:5.97:46,6,0	1/1:35,0:35:6.47:53,6,0	1/1:27,0:26:3:26,3,0	1/1:24,0:22:5.75:70,6,0	1/1:33,0:32:38.99:340,39,0	0/1:16,0:16:5.19:22,0,5	1/1:9,0:9:3:26,3,0	1/1:26,0:25:5.20:48,5,0	./.	1/1:23,0:21:2.99:25,3,0	1/1:24,0:23:2.99:24,3,0	1/1:18,0:16:2.07:22,2,0	1/1:31,0:30:5.78:68,6,0	1/1:22,0:22:5.74:38,6,0	1/1:24,0:22:7.71:54,8,0	1/1:27,0:27:13.24:120,13,0	1/1:13,0:13:3:26,3,0
chr10	8565068	.	A	AT	4629.28	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-11.889;DP=574;FS=0.754;HRun=9;HaplotypeScore=55.3811;InbreedingCoeff=0.9886;MQ=81.70;MQ0=0;MQRankSum=-1.461;QD=26.01;ReadPosRankSum=2.481;VQSLOD=5.3906;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,19:25:60.15:657,60,0	1/1:2,9:11:27.07:299,27,0	0/0:18,0:18:41.88:0,42,351	0/0:15,0:15:22.49:0,22,180	1/1:3,18:21:37.11:634,37,0	1/1:4,22:26:66.15:719,66,0	1/1:3,15:18:36.10:398,36,0	0/0:38,1:39:53.27:0,53,679	1/1:6,16:22:19.03:429,19,0	0/0:27,0:27:68.93:0,69,592	0/0:26,0:26:62.96:0,63,542	0/0:9,0:9:26.98:0,27,231	0/0:22,0:22:59.99:0,60,521	0/0:11,0:11:23.99:0,24,208	0/0:22,0:22:62.97:0,63,543	1/1:4,12:16:39.07:419,39,0	1/1:5,16:21:60.16:663,60,0	0/0:26,0:26:65.94:0,66,566	0/0:17,0:17:41.68:0,42,358	0/0:31,0:31:71.94:0,72,621	0/0:15,0:15:41.99:0,42,365	0/0:21,0:21:56.99:0,57,495	0/0:22,0:22:59.97:0,60,517	0/0:25,1:26:35.74:0,36,528	1/1:5,12:18:38.94:412,39,0	0/0:22,0:22:56.96:0,57,491	0/0:17,0:17:44.99:0,45,391	0/0:10,0:10:8.98:0,9,78
chr10	8565159	.	T	TA	8181.05	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-14.705;DP=633;FS=12.096;HRun=1;HaplotypeScore=57.0189;InbreedingCoeff=0.9973;MQ=86.01;MQ0=0;MQRankSum=-2.562;QD=39.91;ReadPosRankSum=2.133;VQSLOD=4.6118;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,21:23:63.13:906,63,0	1/1:0,8:8:24.08:360,24,0	0/0:26,0:26:73.61:0,74,867	0/0:22,0:22:60.16:0,60,746	1/1:0,24:24:63.21:942,63,0	1/1:2,14:16:45.15:668,45,0	1/1:1,22:23:57.19:854,57,0	0/0:36,0:36:99:0,99,1273	1/1:0,20:20:51.17:764,51,0	0/0:27,0:27:75.22:0,75,942	0/0:21,0:21:60.19:0,60,764	0/0:22,0:22:66.21:0,66,856	0/0:28,0:28:84.27:0,84,1090	0/0:24,0:24:72.22:0,72,920	0/0:28,0:28:84.26:0,84,1075	1/1:1,21:22:63.21:944,63,0	1/1:0,24:24:72.24:1079,72,0	1/1:0,22:22:48.16:719,48,0	0/0:14,0:14:39.12:0,39,495	0/0:25,0:24:72.23:0,72,935	0/0:20,0:20:54.18:0,54,701	0/0:29,0:29:72.23:0,72,922	0/0:18,0:18:54.18:0,54,698	0/0:25,0:25:69.19:0,69,862	1/1:0,23:23:63.21:944,63,0	0/0:28,0:28:81.26:0,81,1051	0/0:30,0:30:90.28:0,90,1152	0/0:5,0:5:15.05:0,15,195
chr10	8565696	.	T	TGG	3160.06	PASS	AB=0.889;AC=33;AF=0.611;AN=54;BaseQRankSum=3.533;DP=415;FS=0.000;HRun=9;HaplotypeScore=108.9970;InbreedingCoeff=0.8485;MQ=80.20;MQ0=1;MQRankSum=-7.199;QD=14.23;ReadPosRankSum=-4.992;VQSLOD=0.7137;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:54.04:0,54,548	0/0:8,0:8:24.05:0,24,249	0/1:21,0:23:14.81:15,0,230	0/0:18,0:16:8.90:0,9,222	0/0:13,0:13:33.07:0,33,351	0/0:16,0:16:38.73:0,39,377	0/0:22,0:23:50.86:0,51,522	1/1:5,8:14:23.55:307,24,0	1/1:5,0:10:17.97:77,18,0	1/1:12,2:15:20.50:238,21,0	1/1:10,0:13:8.46:53,8,0	1/1:11,3:17:40.44:382,40,0	1/1:11,3:14:23.51:265,24,0	1/1:6,3:9:20.98:245,21,0	1/1:9,4:14:23.97:266,24,0	0/0:18,0:18:42.01:0,42,432	0/0:30,0:30:72.07:0,72,754	0/0:21,0:21:51.09:0,51,532	1/1:5,3:8:15.01:204,15,0	1/1:5,1:6:6.02:91,6,0	1/1:6,1:9:8.30:68,8,0	1/1:7,0:8:5.46:29,5,0	1/1:5,3:8:8.54:102,9,0	1/1:9,10:23:46.40:488,46,0	0/0:18,0:18:45.01:0,45,449	1/1:11,1:13:20.49:218,20,0	1/1:8,6:17:31.49:325,31,0	./.
chr10	8565724	.	TAAGA	T	12965.58	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=0.308;DP=432;FS=9.236;HRun=0;HaplotypeScore=97.2283;InbreedingCoeff=0.8787;MQ=72.81;MQ0=1;MQRankSum=-4.320;QD=33.50;ReadPosRankSum=3.415;VQSLOD=4.6239;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,22:27:21.79:914,22,0	1/1:3,10:13:27.09:439,27,0	0/0:22,0:21:22.47:0,22,467	0/0:23,0:18:13.01:0,13,446	1/1:6,15:21:36.12:589,36,0	1/1:1,11:12:33.11:554,33,0	1/1:4,16:20:45.15:756,45,0	1/1:7,5:12:15.04:227,15,0	1/1:1,10:11:30.10:503,30,0	1/1:4,9:13:24.06:375,24,0	1/1:2,13:15:24.08:401,24,0	1/1:4,11:15:33.11:524,33,0	1/1:2,15:17:42.07:704,42,0	1/1:4,9:13:24.08:403,24,0	1/1:2,9:11:21.06:340,21,0	1/1:3,14:17:39.13:631,39,0	1/1:8,22:30:60.20:1008,60,0	1/1:5,10:15:24.08:403,24,0	1/1:3,7:10:21.07:339,21,0	1/1:1,7:8:18.06:302,18,0	1/1:1,5:6:12.04:200,12,0	1/1:2,5:7:15.05:247,15,0	1/1:1,5:6:12.04:202,12,0	1/1:3,18:21:38.94:648,39,0	1/1:4,18:22:40.57:702,41,0	1/1:8,10:18:30.10:503,30,0	1/1:4,20:24:57.19:954,57,0	1/1:1,2:3:6.02:101,6,0
chr10	8567060	.	C	CA	8549.27	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=-14.021;DP=617;FS=12.209;HRun=9;HaplotypeScore=62.7756;InbreedingCoeff=0.9766;MQ=79.44;MQ0=5;MQRankSum=-1.639;QD=25.22;ReadPosRankSum=2.749;VQSLOD=4.9487;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,21:24:54.15:597,54,0	1/1:2,6:8:18.05:199,18,0	0/0:36,0:28:46.17:0,46,374	0/0:22,0:18:19.12:0,19,225	1/1:4,33:37:93.21:1014,93,0	1/1:1,24:26:66.01:711,66,0	1/1:2,11:13:5.17:244,5,0	0/0:26,0:26:45.42:0,45,526	1/1:2,0:13:25.60:128,26,0	1/1:3,12:15:36.06:384,36,0	1/1:4,23:27:69.14:748,69,0	0/0:17,0:18:47.01:0,47,394	0/0:22,0:22:59.98:0,60,521	0/0:16,0:16:41.97:0,42,361	1/1:1,20:22:53.98:579,54,0	1/1:2,19:21:57.15:631,57,0	1/1:5,14:19:41.95:446,42,0	1/1:2,27:29:62.84:675,63,0	0/0:20,0:20:44.97:0,45,388	0/0:38,0:38:98.92:0,99,852	0/0:6,0:7:20.03:0,20,162	1/1:2,17:19:54.14:592,54,0	1/1:6,28:35:78.04:840,78,0	1/1:3,6:9:18.05:199,18,0	1/1:1,21:22:51.14:564,51,0	0/0:19,1:20:14.67:0,15,346	0/0:36,0:37:91.99:0,92,783	0/0:15,0:15:44.99:0,45,391
chr10	8570612	.	C	CAT	2086.52	PASS	AC=20;AF=0.370;AN=54;BaseQRankSum=0.077;DP=235;FS=7.628;HRun=0;HaplotypeScore=75.7622;InbreedingCoeff=0.7166;MQ=57.28;MQ0=1;MQRankSum=-5.581;QD=21.51;ReadPosRankSum=2.853;VQSLOD=3.8632;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:11.98:0,12,128	0/0:4,0:4:7.79:0,8,65	0/0:9,0:9:27.09:0,27,407	0/0:7,0:7:18.06:0,18,275	0/0:10,0:10:10.56:0,11,99	0/0:6,0:6:1.25:0,1,43	0/0:12,0:12:16.53:0,17,150	1/1:1,20:19:20.71:785,21,0	0/0:6,0:6:8.78:0,9,64	0/0:8,0:8:19.50:0,19,161	0/0:8,0:8:3.70:0,4,47	1/1:0,8:10:15.04:194,15,0	1/1:0,5:5:9.03:107,9,0	1/1:0,6:6:6.02:87,6,0	0/0:6,0:6:12:0,12,138	0/0:6,0:6:6.01:0,6,71	0/0:4,0:4:4.83:0,5,45	0/0:2,0:2:1.55:0,2,4	1/1:2,2:4:2.52:31,3,0	1/1:3,6:9:12.04:164,12,0	1/1:1,3:4:3.01:36,3,0	./.	0/0:12,0:12:8.62:0,9,130	0/0:10,0:10:13.35:0,13,161	0/0:14,0:14:7.81:0,8,58	1/1:3,12:15:8.25:469,8,0	1/1:0,13:13:21.06:266,21,0	1/1:0,10:10:9.92:132,10,0
chr10	8571627	.	AAC	A	8953.09	PASS	AB=0.958;AC=48;AF=0.889;AN=54;BaseQRankSum=-1.250;DP=609;FS=42.025;HRun=0;HaplotypeScore=92.4737;InbreedingCoeff=0.5432;MQ=74.50;MQ0=23;MQRankSum=-0.242;QD=17.87;ReadPosRankSum=5.515;VQSLOD=3.0612;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:20:32.98:353,33,0	1/1:11,0:11:19.84:203,20,0	0/0:50,1:24:29.54:0,30,359	0/0:57,0:32:42.50:0,43,518	1/1:22,2:24:48.80:495,49,0	1/1:23,0:23:53.92:532,54,0	1/1:21,0:20:42.09:497,42,0	1/1:10,13:23:41.85:470,42,0	1/1:5,11:16:14.97:146,15,0	1/1:25,0:25:43.30:481,43,0	1/1:3,13:16:20.72:135,21,0	1/1:19,0:19:45.14:543,45,0	1/1:5,17:21:2.60:37,3,0	1/1:19,0:18:39.03:433,39,0	1/1:27,0:26:12.86:488,13,0	1/1:19,0:19:42.06:476,42,0	1/1:25,0:25:45.52:504,46,0	1/1:8,0:8:14.71:154,15,0	1/1:2,16:18:47.90:536,48,0	1/1:4,10:14:23.92:218,24,0	1/1:36,0:35:63.61:744,64,0	1/1:5,5:10:5.56:30,6,0	1/1:8,2:10:21.01:226,21,0	0/1:30,3:31:99:108,0,119	0/1:21,0:21:7.25:326,0,7	1/1:5,23:28:62.27:706,62,0	1/1:1,11:12:9.03:111,9,0	./.
chr10	8571644	.	AAACACAC	A	419.90	PASS	AB=0.929;AC=10;AF=0.179;AN=56;BaseQRankSum=6.450;DP=659;FS=4.854;HRun=0;HaplotypeScore=184.5140;InbreedingCoeff=0.0460;MQ=53.26;MQ0=36;MQRankSum=-2.525;QD=2.03;ReadPosRankSum=1.312;VQSLOD=1.9097;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:29:11.65:0,12,105	0/0:8,0:9:3.83:0,4,78	0/1:36,0:10:4.78:5,0,217	0/0:40,0:15:26.43:0,26,285	0/1:22,1:22:15.84:16,0,47	0/1:27,1:30:87.70:112,0,88	0/1:22,1:21:0.66:1,0,55	0/0:19,0:19:40.57:0,41,263	1/1:19,3:22:6.45:174,6,0	0/0:24,0:23:54.61:0,55,754	0/0:14,0:14:0:0,0,1	0/0:24,0:24:51.59:0,52,638	0/0:27,0:26:25.79:0,26,397	0/0:26,0:25:56.24:0,56,703	0/0:31,0:29:52.25:0,52,752	0/1:19,2:22:60.58:61,0,71	0/1:26,3:27:99:142,0,101	0/1:7,1:8:37.70:38,0,51	0/0:26,0:25:61.52:0,62,416	0/1:12,0:13:1.97:2,0,41	0/0:50,0:49:52.39:0,52,993	0/0:10,0:9:9:0,9,158	0/0:9,0:8:15.90:0,16,311	0/0:39,0:36:33.73:0,34,910	0/0:22,1:22:28.51:0,29,125	0/0:26,0:25:61.11:0,61,744	0/0:16,0:15:21.54:0,22,485	0/0:7,0:6:18.05:0,18,423
chr10	8571809	.	T	TG	33154.98	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-7.869;DP=829;FS=0.526;HRun=0;HaplotypeScore=81.6020;InbreedingCoeff=0.9480;MQ=78.86;MQ0=0;MQRankSum=-12.017;QD=42.89;ReadPosRankSum=6.056;VQSLOD=4.8708;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,52:52:99:2396,151,0	1/1:0,11:11:27.09:429,27,0	0/0:24,0:24:72.19:0,72,933	0/0:32,0:32:66.02:0,66,1088	1/1:1,24:25:69.24:1100,69,0	1/1:0,20:20:51.17:814,51,0	1/1:2,34:35:84.29:1342,84,0	1/1:1,27:28:81.23:1245,81,0	1/1:0,30:30:87.30:1380,87,0	1/1:0,40:40:99:1864,120,0	1/1:0,19:19:57.19:909,57,0	1/1:0,28:28:78.10:1236,78,0	1/1:0,34:34:96.28:1533,96,0	1/1:0,29:29:81.12:1293,81,0	1/1:0,47:46:99:2013,126,0	1/1:0,35:35:99:1581,99,0	1/1:0,38:38:99:1677,105,0	1/1:0,20:20:51.17:814,51,0	1/1:1,16:17:48.16:765,48,0	1/1:0,22:22:57.19:910,57,0	1/1:2,42:44:99:1678,105,0	1/1:2,33:35:93.32:1471,93,0	1/1:0,29:29:74.91:1164,75,0	1/1:2,43:45:99:1869,117,0	1/1:1,28:30:75.25:1157,75,0	1/1:0,27:27:81.24:1268,81,0	1/1:0,30:30:72.25:1149,72,0	1/1:0,2:2:6.02:96,6,0
chr10	8574472	.	TA	T	2236.83	PASS	AC=50;AF=0.926;AN=54;BaseQRankSum=-1.952;DP=300;FS=5.643;HRun=13;HaplotypeScore=34.4331;InbreedingCoeff=0.4171;MQ=58.58;MQ0=28;MQRankSum=-1.413;QD=9.02;ReadPosRankSum=1.832;VQSLOD=1.7834;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,0:24:31.01:90,31,0	1/1:1,0:5:7.25:22,7,0	0/0:26,0:5:0.89:0,1,2	0/0:24,0:4:1.24:0,1,24	1/1:3,0:13:20.36:59,20,0	1/1:3,0:14:22.40:65,22,0	1/1:1,0:5:6.11:18,6,0	1/1:8,9:15:28.73:193,29,0	./.	1/1:2,8:9:20.86:151,21,0	1/1:2,4:6:8.93:66,9,0	1/1:2,3:4:8.95:65,9,0	1/1:3,8:10:26.84:197,27,0	1/1:1,5:6:11.93:88,12,0	1/1:2,3:3:8.95:66,9,0	1/1:3,0:3:2.03:6,2,0	1/1:3,0:16:26.26:76,26,0	1/1:3,0:13:20.15:58,20,0	1/1:5,7:11:20.85:151,21,0	1/1:1,6:7:5.83:44,6,0	1/1:0,8:8:20.88:153,21,0	1/1:0,2:2:5.97:44,6,0	1/1:1,5:6:14.90:109,15,0	1/1:0,3:3:5.97:44,6,0	1/1:3,1:10:19.28:69,19,0	1/1:5,8:13:26.79:193,27,0	1/1:3,8:10:23.76:175,24,0	1/1:6,6:10:17.89:131,18,0
chr10	8575604	.	T	TGG	5061.49	PASS	AB=0.591;AC=39;AF=0.696;AN=56;BaseQRankSum=-5.489;DP=649;FS=1.637;HRun=9;HaplotypeScore=136.9053;InbreedingCoeff=0.7968;MQ=76.59;MQ0=0;MQRankSum=-1.308;QD=11.48;ReadPosRankSum=-0.698;VQSLOD=1.8789;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,0:35:11.89:113,12,0	1/1:3,0:8:14.35:51,14,0	0/0:27,0:25:48:0,48,474	0/0:15,0:15:6.99:0,7,167	1/1:9,0:27:43.55:154,44,0	0/1:8,0:26:18.54:87,0,19	1/1:3,0:22:0.01:70,0,0	1/1:2,8:14:24:295,24,0	1/1:6,13:20:26.84:413,27,0	0/0:42,0:42:96.15:0,96,1014	0/0:12,0:12:23.93:0,24,241	1/1:6,11:19:29.76:423,30,0	1/1:11,18:29:57.08:780,57,0	1/1:7,15:25:44.47:625,44,0	0/0:28,0:28:75.16:0,75,782	1/1:8,1:37:31.85:218,32,0	1/1:2,0:24:11.93:113,12,0	1/1:3,0:13:24.43:86,24,0	1/1:5,6:14:17.96:179,18,0	1/1:7,11:19:23.84:337,24,0	1/1:14,1:21:2.55:36,3,0	0/0:28,0:28:63.12:0,63,661	0/0:26,0:26:66.07:0,66,702	0/0:29,0:29:75.13:0,75,789	1/1:6,0:31:10.01:104,10,0	1/1:17,12:32:35.47:480,35,0	1/1:8,12:21:31.79:403,32,0	1/1:0,3:3:6.02:92,6,0
chr10	8576292	.	GGTGTGTGTGT	G	2389.64	PASS	AB=0.971;AC=28;AF=0.560;AN=50;BaseQRankSum=0.525;DP=430;FS=11.999;HRun=0;HaplotypeScore=127.7301;InbreedingCoeff=0.5594;MQ=57.44;MQ0=11;MQRankSum=-2.925;QD=10.30;ReadPosRankSum=1.139;VQSLOD=1.9887;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:18:15.05:0,15,570	0/0:4,0:5:9.03:0,9,329	./.	./.	0/0:17,0:20:18.06:0,18,643	0/0:14,0:13:8.82:0,9,291	0/0:14,0:14:11.92:0,12,359	1/1:34,0:33:3.01:38,3,0	1/1:10,0:12:9.02:166,9,0	1/1:12,2:14:5.91:176,6,0	0/1:11,0:11:0:0,0,0	1/1:8,3:11:6.02:176,6,0	1/1:11,2:13:9.01:200,9,0	1/1:9,4:14:6.02:152,6,0	1/1:5,2:7:9.02:173,9,0	0/0:8,0:9:15.05:0,15,551	0/0:15,0:15:18.06:0,18,784	0/0:19,0:19:6.02:0,6,227	1/1:14,1:15:6.02:175,6,0	0/1:9,0:9:10.01:85,0,10	./.	1/1:11,5:16:21.07:579,21,0	1/1:14,1:14:6.02:149,6,0	1/1:16,0:16:8.78:200,9,0	0/0:20,0:22:21.07:0,21,766	0/1:18,1:19:0.02:118,0,0	0/1:13,0:14:82.62:85,0,83	1/1:10,2:12:3.01:88,3,0
chr10	8576378	.	T	TA	11663.67	PASS	AB=1.000;AC=53;AF=0.946;AN=56;BaseQRankSum=0.151;DP=409;FS=2.241;HRun=7;HaplotypeScore=99.4098;InbreedingCoeff=0.6308;MQ=66.07;MQ0=1;MQRankSum=-6.102;QD=29.83;ReadPosRankSum=2.934;VQSLOD=4.6638;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,7:13:26.97:283,27,0	1/1:3,9:12:33.08:379,33,0	0/0:17,0:18:21.36:0,21,288	0/1:13,0:11:11.09:11,0,63	1/1:3,22:24:63.10:729,63,0	1/1:0,8:8:24.07:288,24,0	1/1:2,6:8:21.05:242,21,0	1/1:6,20:26:72.21:859,72,0	1/1:1,13:14:39.12:471,39,0	1/1:1,19:20:60.18:724,60,0	1/1:2,12:14:39.11:458,39,0	1/1:0,9:9:27.08:326,27,0	1/1:4,10:14:39.04:429,39,0	1/1:3,11:14:33.02:378,33,0	1/1:2,12:14:36.11:435,36,0	1/1:4,9:13:35.98:386,36,0	1/1:5,7:11:26.93:289,27,0	1/1:1,4:5:12.04:145,12,0	1/1:7,18:25:60.16:705,60,0	1/1:2,16:18:45.14:543,45,0	1/1:2,4:6:11.99:128,12,0	1/1:3,8:11:30.08:351,30,0	1/1:0,12:12:35.94:396,36,0	1/1:4,10:14:27.06:308,27,0	1/1:3,18:21:62.96:677,63,0	1/1:1,19:20:57.17:688,57,0	1/1:2,24:26:75.20:890,75,0	1/1:0,4:4:12.04:145,12,0
chr10	8576393	.	T	TA	12358.77	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-0.527;DP=465;FS=4.227;HRun=8;HaplotypeScore=102.3321;InbreedingCoeff=0.8120;MQ=69.44;MQ0=0;MQRankSum=-6.655;QD=28.54;ReadPosRankSum=4.219;VQSLOD=4.3891;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,13:17:32.93:360,33,0	1/1:1,10:11:30.09:346,30,0	0/0:19,0:20:11.22:0,11,256	0/0:12,0:11:2.15:0,2,102	1/1:3,23:26:48.60:772,49,0	1/1:1,7:8:18.05:208,18,0	1/1:1,6:7:21.05:232,21,0	1/1:10,28:38:46.59:970,47,0	1/1:0,15:15:45.13:518,45,0	1/1:1,23:24:69.19:784,69,0	1/1:1,18:19:45.05:501,45,0	1/1:0,8:8:24.07:277,24,0	1/1:1,13:14:39.02:418,39,0	1/1:1,16:17:42.07:461,42,0	1/1:3,14:17:39.12:450,39,0	1/1:1,13:14:36.11:415,36,0	1/1:2,11:13:27.08:311,27,0	1/1:1,4:5:12.04:138,12,0	1/1:6,19:26:68.80:715,69,0	1/1:2,16:18:51.14:578,51,0	1/1:0,5:5:9.03:104,9,0	1/1:0,11:11:33.10:380,33,0	1/1:2,13:15:39.10:440,39,0	1/1:5,10:15:29.92:310,30,0	1/1:5,20:25:35.82:655,36,0	1/1:2,25:27:75.21:854,75,0	1/1:2,29:31:81.19:918,81,0	1/1:0,7:7:21.06:242,21,0
chr10	8577011	.	TTCTCTCTCTCTC	T	2828.47	PASS	AB=0.921;AC=18;AF=0.346;AN=52;BaseQRankSum=4.525;DP=518;FS=2.341;HRun=0;HaplotypeScore=172.3383;InbreedingCoeff=0.7160;MQ=67.55;MQ0=12;MQRankSum=-5.134;QD=20.65;ReadPosRankSum=1.313;VQSLOD=2.8366;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:16,0:15:5.21:5,0,32	1/1:5,0:5:6.02:90,6,0	./.	./.	1/1:9,6:16:12.04:297,12,0	1/1:18,10:28:27.09:802,27,0	1/1:15,0:15:14.41:328,14,0	0/0:33,0:32:10.09:0,10,211	0/0:18,0:18:24.08:0,24,1087	0/0:22,0:28:42.14:0,42,1032	0/0:14,0:18:30.10:0,30,753	0/0:14,0:20:12.03:0,12,355	0/0:21,0:20:30.10:0,30,1051	0/0:11,0:15:15.05:0,15,543	0/0:5,0:12:18.91:0,19,278	1/1:4,7:12:24.08:769,24,0	1/1:8,3:10:4.58:158,5,0	1/1:5,0:5:2.68:92,3,0	0/0:18,0:18:17.85:0,18,250	0/0:34,0:33:15:0,15,812	0/0:22,0:21:19.98:0,20,748	0/0:7,0:13:13.28:0,13,204	0/1:13,0:16:14.42:14,0,67	0/0:14,0:14:3.01:0,3,42	1/1:7,4:11:17.89:457,18,0	0/0:31,0:32:51.17:0,51,1887	0/0:13,0:23:27.56:0,28,1024	0/0:17,0:16:33.11:0,33,1708
chr10	8577546	.	TACAC	T	5513.51	PASS	AB=0.643;AC=44;AF=0.846;AN=52;BaseQRankSum=-1.612;DP=444;FS=6.087;HRun=0;HaplotypeScore=133.9013;InbreedingCoeff=0.3439;MQ=56.88;MQ0=5;MQRankSum=1.741;QD=14.51;ReadPosRankSum=2.450;VQSLOD=3.9497;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:11,5:15:0.93:41,1,0	0/1:8,1:10:8.05:124,0,8	./.	0/0:22,0:12:13.03:0,13,111	0/1:4,19:23:0.16:0,0,1	0/0:4,12:16:0.47:0,0,1	./.	1/1:16,19:35:26.01:677,26,0	1/1:7,5:12:11.90:203,12,0	1/1:4,0:17:44.95:428,45,0	1/1:6,0:18:19.59:163,20,0	1/1:5,2:16:17.78:248,18,0	1/1:2,2:10:18.04:241,18,0	1/1:4,7:12:6.02:89,6,0	1/1:6,0:15:20.75:162,21,0	0/1:3,18:21:0.35:0,0,0	1/1:7,10:17:8.94:118,9,0	1/1:11,0:11:17.93:243,18,0	0/1:8,9:16:14.58:353,0,15	1/1:6,8:16:11.88:135,12,0	1/1:4,0:8:6.01:67,6,0	1/1:0,0:2:2.98:21,3,0	1/1:4,0:15:14.77:130,15,0	1/1:2,0:7:2.54:19,3,0	1/1:11,4:16:24.05:388,24,0	1/1:5,3:23:59.93:814,60,0	1/1:9,2:25:41.78:488,42,0	1/1:4,4:12:23.63:360,24,0
chr10	8577569	.	ATGTGTG	A	1506.32	PASS	AC=12;AF=0.222;AN=54;BaseQRankSum=4.217;DP=453;FS=4.035;HRun=0;HaplotypeScore=158.6371;InbreedingCoeff=0.6583;MQ=45.51;MQ0=14;MQRankSum=-5.793;QD=16.74;ReadPosRankSum=1.208;VQSLOD=3.3613;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:21:3.01:0,3,36	0/0:3,0:8:9.03:0,9,157	0/0:7,0:1:0.47:0,0,1	./.	0/0:23,0:24:1.21:0,1,26	0/0:17,0:17:5.56:0,6,129	0/0:14,0:14:3.01:0,3,89	0/0:25,0:24:12:0,12,293	0/0:10,0:17:5.02:0,5,54	1/1:8,11:19:35.91:679,36,0	1/1:10,12:24:15.99:273,16,0	0/0:17,0:16:21.05:0,21,569	0/0:11,0:11:23.99:0,24,469	0/0:10,0:10:6.02:0,6,163	1/1:6,9:14:15.05:309,15,0	0/0:24,0:24:6.82:0,7,188	0/0:12,0:12:6.49:0,6,98	0/0:11,0:11:17.93:0,18,255	0/0:17,0:13:12.04:0,12,240	0/0:15,0:14:18.01:0,18,508	0/0:11,0:10:12.04:0,12,344	1/1:1,2:4:3.01:52,3,0	1/1:7,9:15:15.05:309,15,0	1/1:6,4:12:3.01:44,3,0	0/0:13,0:16:8.96:0,9,186	0/0:28,0:26:45.13:0,45,1055	0/0:23,0:21:30.04:0,30,704	0/0:15,0:12:18.06:0,18,396
chr10	8578487	.	GA	G	6744.62	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=13.149;DP=702;FS=7.021;HRun=5;HaplotypeScore=71.4630;InbreedingCoeff=0.9995;MQ=66.50;MQ0=4;MQRankSum=-1.174;QD=29.45;ReadPosRankSum=3.521;VQSLOD=5.4479;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,26:27:72.20:815,72,0	1/1:1,10:10:27.08:306,27,0	0/0:26,0:17:45.14:0,45,582	0/0:33,1:23:43.08:0,43,675	1/1:4,29:32:78.21:884,78,0	1/1:0,23:23:60.17:680,60,0	1/1:0,15:15:39.11:442,39,0	0/0:24,0:24:63.19:0,63,826	0/0:18,0:18:51.17:0,51,697	0/0:29,0:29:84.28:0,84,1142	0/0:23,0:23:63.21:0,63,852	0/0:19,0:19:57.19:0,57,774	0/0:20,0:20:57.19:0,57,774	0/0:25,0:25:75.24:0,75,1009	0/0:21,0:21:63.16:0,63,825	1/1:1,39:40:99:1293,114,0	1/1:0,28:27:81.23:919,81,0	1/1:1,18:19:24.29:486,24,0	0/0:24,0:24:63.21:0,63,852	0/0:28,0:28:84.28:0,84,1145	0/0:18,0:18:51.17:0,51,689	0/0:30,0:30:84.24:0,84,1098	0/0:34,0:34:99:0,99,1336	0/0:18,0:17:39.13:0,39,533	1/1:3,30:33:81.23:919,81,0	0/0:32,0:32:96.31:0,96,1296	0/0:31,0:31:93.29:0,93,1250	0/0:19,0:19:54.18:0,54,738
chr10	8580265	.	AG	A	6762.90	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=6.749;DP=684;FS=16.250;HRun=4;HaplotypeScore=79.6801;InbreedingCoeff=0.9956;MQ=94.14;MQ0=0;MQRankSum=-5.110;QD=29.92;ReadPosRankSum=1.138;VQSLOD=3.3718;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,129,1779	0/0:13,0:13:36.11:0,36,489	0/0:34,0:34:96.32:0,96,1323	0/0:28,0:28:72.20:0,72,967	0/0:26,0:26:75.23:0,75,1031	0/0:18,0:18:51.17:0,51,708	0/0:27,0:27:81.27:0,81,1134	1/1:2,25:27:75.21:879,75,0	0/0:23,0:23:60.20:0,60,838	0/0:35,0:35:99:0,105,1470	0/0:17,0:17:42.14:0,42,588	1/1:2,19:21:48.15:576,48,0	1/1:1,19:20:48.15:576,48,0	1/1:1,20:21:51.16:612,51,0	0/0:23,0:22:57.15:0,57,760	0/0:17,0:17:51.15:0,51,696	0/0:30,0:30:72.24:0,72,1006	0/0:20,0:20:60.20:0,60,840	1/1:1,20:21:60.11:667,60,0	1/1:2,20:22:60.18:719,60,0	1/1:1,26:27:54.17:648,54,0	0/0:27,0:27:75.23:0,75,1027	0/0:22,0:22:60.20:0,60,840	0/0:30,0:30:75.21:0,75,1026	0/0:23,0:23:69.20:0,69,932	1/1:3,30:33:12.31:971,12,0	1/1:1,23:24:63.19:755,63,0	1/1:0,10:10:30.09:360,30,0
chr10	8580354	.	TAC	T	925.36	PASS	AB=0.880;AC=15;AF=0.278;AN=54;BaseQRankSum=-4.707;DP=612;FS=0.000;HRun=0;HaplotypeScore=91.2378;InbreedingCoeff=0.3299;MQ=67.75;MQ0=20;MQRankSum=1.001;QD=5.68;ReadPosRankSum=0.118;VQSLOD=2.6075;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:26.43:0,26,260	0/0:12,0:12:2.60:0,3,10	./.	0/0:56,0:27:0:0,0,0	0/0:18,0:18:5.64:0,6,44	0/0:25,0:24:26:0,26,230	0/0:15,0:25:2.79:0,3,26	0/1:19,2:21:14.86:27,0,15	0/0:18,0:23:3:0,3,26	0/0:12,0:23:37.67:0,38,368	0/0:9,0:10:3:0,3,26	1/1:14,2:18:14.70:127,15,0	1/1:12,5:17:21.01:211,21,0	0/1:7,2:10:72.26:86,0,72	0/0:10,0:21:2.96:0,3,27	0/0:14,0:14:6.01:0,6,63	0/0:24,0:24:23.04:0,23,226	0/0:19,0:18:12.34:0,12,103	0/0:13,0:13:0:0,0,0	1/1:11,4:16:14.87:146,15,0	0/1:21,4:25:46.24:144,0,46	0/0:15,0:16:7.25:0,7,68	0/1:17,1:19:18.14:18,0,104	0/0:18,0:38:27:0,27,253	0/0:24,0:24:12:0,12,117	0/1:17,1:19:20.92:108,0,21	1/1:6,4:10:15.03:157,15,0	1/1:7,1:8:6.01:64,6,0
chr10	8580385	.	A	ACACA	2631.73	PASS	AB=1.000;AC=32;AF=0.593;AN=54;BaseQRankSum=-5.491;DP=615;FS=0.796;HRun=0;HaplotypeScore=107.4445;InbreedingCoeff=0.4058;MQ=54.04;MQ0=16;MQRankSum=1.730;QD=6.51;ReadPosRankSum=-4.385;VQSLOD=1.0218;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:33,0:33:36.86:515,37,0	1/1:10,0:10:3.01:65,3,0	./.	0/1:25,0:4:0:0,0,0	1/1:14,0:14:6.02:116,6,0	0/1:27,0:26:22.81:287,0,23	1/1:30,0:29:2.73:46,3,0	0/0:19,0:19:2.80:0,3,19	1/1:19,0:19:2.74:12,3,0	1/1:27,0:27:33.91:410,34,0	1/1:11,0:11:3.01:71,3,0	0/0:18,0:18:15.01:0,15,140	0/0:26,0:26:14.62:0,15,139	0/0:20,0:19:15.50:0,16,178	1/1:24,0:24:3.42:53,3,0	1/1:17,0:17:3.01:48,3,0	1/1:25,0:25:15.05:277,15,0	1/1:17,0:16:9.65:158,10,0	0/1:18,0:18:0:0,0,0	0/0:20,0:20:15.02:0,15,140	0/0:34,0:34:14.85:0,15,146	1/1:18,4:23:5.79:37,6,0	0/1:15,0:15:16.04:149,0,16	0/1:41,0:41:20.52:364,0,21	1/1:20,0:20:12.03:167,12,0	0/0:25,0:25:7.56:0,8,81	0/0:25,0:25:11.81:0,12,111	0/1:8,0:8:19.05:27,0,19
chr10	8581120	.	A	AT	10791.57	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-17.636;DP=658;FS=10.817;HRun=1;HaplotypeScore=62.8916;InbreedingCoeff=0.9949;MQ=80.34;MQ0=0;MQRankSum=-2.503;QD=41.83;ReadPosRankSum=3.359;VQSLOD=4.8034;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,56:57:99:2383,160,0	1/1:0,8:8:24.08:360,24,0	0/0:12,0:12:26.76:0,27,317	0/0:23,0:24:44.78:0,45,443	1/1:0,28:28:81.27:1214,81,0	1/1:1,20:21:57.19:854,57,0	1/1:0,28:28:84.28:1259,84,0	0/0:33,0:33:93.30:0,93,1197	1/1:0,20:20:57.19:854,57,0	0/0:27,0:27:78.25:0,78,1013	0/0:28,0:28:84.27:0,84,1091	0/0:14,0:14:39.13:0,39,506	0/0:22,0:22:66.21:0,66,857	0/0:17,0:17:51.14:0,51,634	0/0:31,0:31:93.29:0,93,1193	1/1:1,20:21:60.20:899,60,0	1/1:0,28:28:75.25:1124,75,0	1/1:0,31:31:81.27:1214,81,0	0/0:22,0:22:60.20:0,60,779	0/0:30,0:30:90.28:0,90,1154	0/0:31,0:31:90.24:0,90,1133	0/0:19,0:19:54.18:0,54,701	0/0:24,0:24:72.23:0,72,935	0/0:15,0:15:45.15:0,45,584	1/1:0,16:16:42.14:630,42,0	0/0:21,0:21:63.20:0,63,818	0/0:26,0:26:78.25:0,78,1011	0/0:4,0:4:12.04:0,12,150
chr10	8582987	.	G	GAAGGGAGGGAGA	52543.39	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-6.653;DP=727;FS=4.291;HRun=0;HaplotypeScore=132.1423;InbreedingCoeff=0.9229;MQ=51.55;MQ0=2;MQRankSum=-3.247;QD=78.31;ReadPosRankSum=6.223;VQSLOD=4.5872;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,18:32:38.49:2096,38,0	1/1:0,14:14:27.09:1616,27,0	0/0:27,0:17:38.53:0,39,617	0/0:28,0:15:14.57:0,15,557	1/1:3,25:34:48.08:2382,48,0	1/1:2,18:23:30.10:1786,30,0	1/1:4,12:22:14.64:724,15,0	1/1:20,0:20:36.11:1330,36,0	1/1:2,17:23:27.09:1612,27,0	1/1:5,22:32:72.61:3584,73,0	1/1:4,15:21:29.97:1378,30,0	1/1:5,10:24:27.09:1599,27,0	1/1:3,21:32:33.11:1868,33,0	1/1:4,18:30:33.11:1881,33,0	1/1:3,20:27:39.13:2328,39,0	1/1:1,27:33:45.15:2694,45,0	1/1:8,11:23:21.07:1165,21,0	1/1:2,8:12:21.07:1213,21,0	1/1:5,14:28:69.19:2371,69,0	1/1:3,21:27:45.02:2315,45,0	1/1:3,7:14:6.02:359,6,0	1/1:5,20:30:30.02:1526,30,0	1/1:4,25:32:51.17:3010,51,0	1/1:7,11:26:21.07:1201,21,0	1/1:2,26:33:69.24:4120,69,0	1/1:5,28:42:99:4930,105,0	1/1:0,20:27:38.76:2333,39,0	1/1:8,1:10:30.10:1124,30,0
chr10	8583615	.	T	TG	7383.95	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=2.370;DP=556;FS=4.678;HRun=7;HaplotypeScore=73.6001;InbreedingCoeff=0.9886;MQ=81.50;MQ0=0;MQRankSum=-4.406;QD=26.28;ReadPosRankSum=1.519;VQSLOD=5.7305;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:35.32:0,35,646	0/0:10,0:10:24.03:0,24,232	0/0:35,0:29:65.50:0,65,573	0/0:33,0:30:53.38:0,53,450	0/0:20,0:20:50.99:0,51,476	0/0:14,0:14:33.03:0,33,313	0/0:28,0:28:71.97:0,72,661	1/1:4,21:25:46.58:640,47,0	0/0:11,0:11:30.52:0,31,291	1/1:2,15:17:42.09:463,42,0	1/1:7,12:19:22.15:513,22,0	1/1:2,12:14:33.10:395,33,0	1/1:0,12:12:33.10:393,33,0	1/1:1,19:20:51.16:610,51,0	1/1:3,12:15:10.15:406,10,0	0/0:20,0:20:57.05:0,57,536	0/0:36,0:36:99:0,105,979	0/0:17,0:17:48.03:0,48,450	1/1:7,6:13:21.02:224,21,0	1/1:2,16:18:45.07:503,45,0	1/1:7,14:21:29.78:342,30,0	1/1:2,6:8:18.05:212,18,0	1/1:2,19:21:45.12:531,45,0	1/1:1,37:38:84.26:1015,84,0	0/0:16,0:16:42.06:0,42,404	1/1:1,16:17:44.17:532,44,0	1/1:1,16:17:36.11:431,36,0	1/1:0,5:6:15.04:175,15,0
chr10	8584572	.	A	AT	493.75	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-5.158;DP=712;FS=0.000;HRun=8;HaplotypeScore=67.6859;InbreedingCoeff=0.9509;MQ=79.14;MQ0=0;MQRankSum=-0.813;QD=27.43;ReadPosRankSum=1.316;VQSLOD=4.1442;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,129,1174	0/0:17,0:17:48.02:0,48,439	0/0:16,0:16:15.45:0,15,232	0/0:20,0:20:11.14:0,11,302	0/0:27,0:27:66.02:0,66,604	0/0:27,0:28:71.05:0,71,633	0/0:21,0:21:60.03:0,60,549	0/0:23,0:23:56.96:0,57,510	1/1:0,18:18:51.15:589,51,0	0/0:24,0:24:60.02:0,60,546	0/0:21,0:21:54.01:0,54,491	0/0:22,0:22:63.02:0,63,573	0/0:31,0:31:78.03:0,78,714	0/0:28,0:28:77.98:0,78,704	0/0:29,0:29:65.99:0,66,595	0/0:34,0:34:87.01:0,87,788	0/0:24,0:24:72.02:0,72,653	0/0:25,0:25:72:0,72,652	0/0:21,0:21:51:0,51,463	0/0:37,0:37:99:0,108,988	0/0:30,0:30:86.98:0,87,781	0/0:24,0:24:68.94:0,69,614	0/0:22,0:22:54.02:0,54,494	0/0:25,0:25:71.98:0,72,644	0/0:26,0:26:63.02:0,63,577	0/0:24,0:24:63.01:0,63,571	0/0:33,0:32:89.99:0,90,809	0/0:16,0:16:48.03:0,48,439
chr10	8587362	.	CGTGTGTGTGT	C	5047.44	PASS	AB=1.000;AC=28;AF=0.500;AN=56;BaseQRankSum=2.768;DP=682;FS=3.433;HRun=0;HaplotypeScore=240.8823;InbreedingCoeff=0.6699;MQ=66.65;MQ0=9;MQRankSum=-4.609;QD=13.79;ReadPosRankSum=-0.667;VQSLOD=3.7043;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:37:39.08:0,39,1018	0/0:5,0:8:9.03:0,9,404	0/0:26,0:15:5.99:0,6,51	0/0:33,0:22:14.47:0,14,105	0/0:29,0:34:17.44:0,17,343	0/0:23,0:26:32.05:0,32,875	0/0:39,0:39:31.68:0,32,465	1/1:7,16:23:40.91:518,41,0	0/0:1,0:9:8.90:0,9,117	0/1:24,0:23:8.66:423,0,9	0/1:16,0:15:43.04:92,0,43	1/1:24,0:24:29.29:479,29,0	1/1:18,0:17:26.72:375,27,0	1/1:18,0:18:18.03:244,18,0	1/1:28,0:28:29.47:322,29,0	0/0:16,0:18:14.08:0,14,377	0/0:48,0:49:75.95:0,76,1396	0/0:19,0:19:22.72:0,23,183	1/1:19,0:19:7.88:182,8,0	1/1:14,2:16:21.03:352,21,0	1/1:52,0:52:53.67:613,54,0	0/1:18,0:18:18.50:32,0,18	1/1:15,0:15:14.21:96,14,0	0/1:33,0:31:32.63:109,0,33	0/0:14,0:16:27.06:0,27,963	1/1:27,0:27:20.24:418,20,0	1/1:19,1:20:33.01:490,33,0	1/1:14,0:14:18.06:301,18,0
chr10	8587386	.	TGTGTGTGC	T	8297.09	PASS	AB=0.960;AC=40;AF=0.714;AN=56;BaseQRankSum=-2.782;DP=760;FS=1.585;HRun=0;HaplotypeScore=212.5796;InbreedingCoeff=-0.1133;MQ=52.27;MQ0=16;MQRankSum=-1.389;QD=11.54;ReadPosRankSum=0.205;VQSLOD=3.6862;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:44,0:44:71.73:72,0,717	0/1:8,0:8:17.97:18,0,285	0/0:25,0:5:5.97:0,6,49	0/1:36,0:7:0.08:9,0,0	0/1:34,0:34:99:103,0,147	0/1:24,0:24:39.95:40,0,555	0/1:39,0:38:99:170,0,170	1/1:30,0:30:3.10:331,3,0	0/0:16,0:16:3.53:0,4,292	1/1:21,2:22:56.86:747,57,0	1/1:14,6:19:25.24:508,25,0	1/1:5,29:34:29.91:748,30,0	1/1:5,20:24:20.49:564,20,0	1/1:3,17:20:12.04:325,12,0	1/1:2,27:29:30.10:774,30,0	0/1:22,0:22:73.31:73,0,251	0/1:45,0:44:20.51:21,0,584	0/1:18,0:18:37.17:82,0,37	0/1:19,0:19:0.66:255,0,1	1/1:4,15:18:12.04:254,12,0	1/1:54,0:53:13.31:359,13,0	1/1:2,22:24:6.02:163,6,0	0/1:2,21:23:5.39:373,0,5	1/1:37,3:37:4.57:450,5,0	0/1:19,0:18:31.99:32,0,615	1/1:3,26:29:68.63:749,69,0	1/1:8,16:23:2.51:594,3,0	1/1:2,15:17:15.96:486,16,0
chr10	8587394	.	C	CGT	2498.42	PASS	AB=0.876;AC=29;AF=0.518;AN=56;BaseQRankSum=0.044;DP=761;FS=21.441;HRun=0;HaplotypeScore=192.1504;InbreedingCoeff=0.1185;MQ=54.05;MQ0=14;MQRankSum=-0.491;QD=4.92;ReadPosRankSum=0.496;VQSLOD=1.4527;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:16,29:46:58.31:218,0,58	0/1:6,3:9:34.77:124,0,35	0/0:24,0:4:9.03:0,9,107	0/0:41,0:10:4.62:0,5,41	1/1:12,18:33:3.01:48,3,0	1/1:9,13:23:15.42:201,15,0	0/0:18,14:32:0.56:0,1,7	0/1:33,0:33:2.86:327,0,3	0/0:18,0:19:38.87:0,39,420	0/1:22,0:22:13.27:51,0,13	0/1:20,0:20:38.54:58,0,39	1/1:32,0:32:13.88:39,14,0	1/1:24,0:23:9.84:28,10,0	1/1:21,0:21:7.23:22,7,0	0/0:30,0:30:27.86:0,28,129	0/1:9,15:24:36.39:36,0,61	0/1:17,16:33:69.42:161,0,69	1/1:9,10:19:9.03:121,9,0	1/1:17,0:17:15.74:159,16,0	0/1:20,0:19:15.37:15,0,79	0/0:34,23:57:11.04:0,11,107	0/0:23,0:23:5.59:0,6,26	0/0:23,0:23:12.53:0,13,50	1/1:40,0:39:10.27:140,10,0	1/1:15,5:19:22.47:376,22,0	0/1:29,0:29:16.10:454,0,16	0/1:25,0:25:41.74:73,0,42	0/1:16,0:16:3.52:26,0,4
chr10	8587487	.	C	CT	3199.19	PASS	AB=0.918;AC=50;AF=0.893;AN=56;BaseQRankSum=0.700;DP=605;FS=0.987;HRun=18;HaplotypeScore=126.7677;InbreedingCoeff=0.2271;MQ=65.07;MQ0=1;MQRankSum=-1.087;QD=5.52;ReadPosRankSum=-2.209;VQSLOD=1.1447;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:34,1:36:46.58:237,47,0	1/1:11,0:13:17.58:88,18,0	0/0:24,1:16:6.27:0,6,33	0/1:13,0:10:5.28:5,0,7	1/1:28,0:28:33.53:162,34,0	1/1:23,1:26:51.46:269,51,0	1/1:28,1:28:29.75:159,30,0	1/1:16,9:25:1.64:65,2,0	1/1:9,0:9:14.90:79,15,0	1/1:20,0:19:14.99:71,15,0	1/1:20,0:20:38.83:212,39,0	1/1:16,1:18:14.74:101,15,0	1/1:18,1:20:11.49:61,11,0	1/1:27,0:27:23.25:137,23,0	1/1:29,1:31:43.71:221,44,0	1/1:16,0:16:29.36:148,29,0	1/1:24,1:25:34.54:170,35,0	1/1:18,1:19:18.43:88,18,0	1/1:13,1:20:9.26:119,9,0	0/1:24,2:26:17.30:77,0,17	1/1:12,2:14:6.84:45,7,0	1/1:15,0:16:29.27:142,29,0	1/1:15,1:16:26.82:146,27,0	1/1:24,1:23:29.48:151,29,0	1/1:20,0:21:32.33:164,32,0	0/1:20,2:26:7.54:66,0,8	1/1:24,0:23:17.45:105,17,0	0/1:9,2:11:5.42:34,0,5
chr10	8588408	.	GGACA	G	10586.07	PASS	AB=0.538;AC=17;AF=0.304;AN=56;BaseQRankSum=16.391;DP=731;FS=1.365;HRun=0;HaplotypeScore=119.7341;InbreedingCoeff=0.9139;MQ=91.59;MQ0=1;MQRankSum=-3.579;QD=42.01;ReadPosRankSum=4.512;VQSLOD=5.4360;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,57:57:99:2318,126,0	1/1:0,7:7:18.06:331,18,0	0/0:34,0:34:96.33:0,96,2391	0/0:27,0:27:75.26:0,75,1967	1/1:6,27:33:69.23:1231,69,0	1/1:2,26:28:66.23:1215,66,0	1/1:3,24:27:66.23:1214,66,0	0/0:28,0:28:78.25:0,78,1898	0/0:29,0:29:78.27:0,78,2009	0/0:17,0:17:48.16:0,48,1262	0/0:13,0:13:39.13:0,39,1030	0/0:25,0:25:72.22:0,72,1785	0/0:23,0:23:66.23:0,66,1729	0/0:37,0:37:99:0,102,2577	0/0:26,0:26:75.26:0,75,1980	1/1:3,30:33:78.27:1418,78,0	0/1:3,18:21:31.35:780,0,31	1/1:3,20:23:51.17:939,51,0	0/0:23,0:23:48.16:0,48,1191	0/0:23,0:23:66.23:0,66,1743	0/0:20,0:20:60.21:0,60,1577	0/0:36,0:36:99:0,105,2604	0/0:16,0:16:45.15:0,45,1188	0/0:31,0:31:90.29:0,90,2304	1/1:1,21:22:63.22:1141,63,0	0/0:25,0:25:72.24:0,72,1816	0/0:38,0:37:99:0,99,2591	0/0:8,0:8:24.08:0,24,632
chr10	8591029	.	GA	G	17429.32	PASS	AB=0.848;AC=54;AF=0.964;AN=56;BaseQRankSum=-4.048;DP=684;FS=1.111;HRun=4;HaplotypeScore=170.9737;InbreedingCoeff=-0.0374;MQ=64.47;MQ0=2;MQRankSum=0.698;QD=25.48;ReadPosRankSum=4.670;VQSLOD=3.1665;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:26:68.93:762,69,0	1/1:13,0:13:38.70:417,39,0	0/1:32,5:19:99:137,0,134	0/1:32,8:28:59.75:267,0,60	1/1:34,0:34:75.68:855,76,0	1/1:29,0:29:78.22:888,78,0	1/1:28,0:28:43.63:684,44,0	1/1:39,0:38:78.12:779,78,0	1/1:28,0:28:70.71:773,71,0	1/1:18,0:18:53.86:548,54,0	1/1:11,0:11:29.82:317,30,0	1/1:33,0:33:98.83:1037,99,0	1/1:31,0:31:80.65:856,81,0	1/1:24,0:24:66.17:742,66,0	1/1:23,0:23:68.69:762,69,0	1/1:31,0:31:77.80:845,78,0	1/1:26,0:26:75.17:829,75,0	1/1:19,0:19:51.01:565,51,0	1/1:15,0:13:32.07:297,32,0	1/1:18,0:18:45.10:496,45,0	1/1:15,0:15:38.85:416,39,0	1/1:18,0:18:47.77:500,48,0	1/1:20,0:20:60.15:666,60,0	1/1:32,0:32:71.88:794,72,0	1/1:24,0:24:71.89:770,72,0	1/1:22,0:22:65.13:677,65,0	1/1:18,0:18:50.90:545,51,0	1/1:7,0:7:17.74:205,18,0
chr10	8591032	.	AAG	A	20260.18	PASS	AB=1.000;AC=53;AF=0.946;AN=56;BaseQRankSum=-2.245;DP=695;FS=15.127;HRun=0;HaplotypeScore=179.1419;InbreedingCoeff=0.5002;MQ=64.11;MQ0=2;MQRankSum=2.404;QD=30.88;ReadPosRankSum=6.436;VQSLOD=5.1256;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,26:26:69.22:923,69,0	1/1:0,13:13:39.12:513,39,0	0/0:37,2:21:3.97:0,4,239	0/1:41,0:26:49.14:49,0,117	1/1:3,26:33:63.21:969,63,0	1/1:2,25:30:73.54:951,74,0	1/1:1,21:27:51.23:738,51,0	1/1:4,24:34:86.05:989,86,0	1/1:3,21:29:74.08:885,74,0	1/1:1,18:19:56.99:779,57,0	1/1:1,9:10:30.07:381,30,0	1/1:9,26:35:99:1346,104,0	1/1:5,25:30:79.07:931,79,0	1/1:1,22:23:61.27:774,61,0	1/1:1,23:24:71.57:888,72,0	1/1:0,24:31:78.23:1040,78,0	1/1:5,23:29:76.11:966,76,0	1/1:3,17:20:47.16:616,47,0	1/1:2,9:14:37.36:430,37,0	1/1:3,14:20:49.86:565,50,0	1/1:2,13:15:41.47:497,41,0	1/1:4,14:18:44.10:585,44,0	1/1:4,19:23:59.94:749,60,0	1/1:0,23:30:72.18:932,72,0	1/1:6,21:27:72.51:941,73,0	1/1:3,21:24:67.16:943,67,0	1/1:1,16:17:50.74:639,51,0	1/1:3,6:9:21.48:243,21,0
chr10	8591034	.	GGGA	G	10015.53	PASS	AB=1.000;AC=51;AF=0.911;AN=56;BaseQRankSum=2.025;DP=690;FS=5.010;HRun=0;HaplotypeScore=227.0557;InbreedingCoeff=0.7809;MQ=63.86;MQ0=2;MQRankSum=3.431;QD=16.50;ReadPosRankSum=10.039;VQSLOD=3.5427;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:27:68.07:512,68,0	1/1:13,0:13:35.35:264,35,0	0/0:38,0:22:9.23:0,9,234	0/0:43,0:24:12.41:0,12,246	1/1:32,0:32:56.77:522,57,0	1/1:30,0:30:63.38:498,63,0	1/1:24,0:24:32.65:311,33,0	1/1:34,0:32:42.74:426,43,0	1/1:27,0:27:62.28:442,62,0	1/1:19,0:19:41.58:408,42,0	1/1:11,0:11:19.77:180,20,0	1/1:34,0:34:68.55:603,69,0	1/1:30,0:30:52.69:430,53,0	1/1:23,0:23:45.74:365,46,0	1/1:25,0:25:66.27:471,66,0	1/1:29,0:29:58.87:503,59,0	1/1:29,0:29:73.90:543,74,0	1/1:20,0:20:13.53:265,14,0	1/1:15,0:13:6.45:144,6,0	1/1:20,0:20:36.54:275,37,0	1/1:15,0:15:28.71:234,29,0	1/1:18,1:19:18.89:267,19,0	1/1:23,0:23:53.52:390,54,0	1/1:30,0:30:64.99:498,65,0	1/1:28,0:28:49.69:460,50,0	1/1:21,3:24:65.56:598,66,0	1/1:17,0:17:35.23:303,35,0	0/1:9,0:9:0.20:103,0,0
chr10	8591036	.	GA	G	17484.50	PASS	AB=0.967;AC=54;AF=0.964;AN=56;BaseQRankSum=-4.132;DP=688;FS=3.202;HRun=1;HaplotypeScore=178.9332;InbreedingCoeff=-0.0372;MQ=64.68;MQ0=2;MQRankSum=0.551;QD=25.41;ReadPosRankSum=5.569;VQSLOD=4.7947;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:30:77.73:824,78,0	1/1:13,0:13:38.70:426,39,0	0/1:41,0:23:70.23:70,0,188	0/1:38,3:24:89.61:90,0,123	1/1:32,0:32:78.61:877,79,0	1/1:29,0:29:81.62:916,82,0	1/1:25,0:25:60.87:735,61,0	1/1:33,0:31:74.21:757,74,0	1/1:27,0:27:76.13:801,76,0	1/1:19,0:19:48.53:569,49,0	1/1:11,0:11:30.89:325,31,0	1/1:32,0:32:93.69:970,94,0	1/1:25,5:30:74.44:819,74,0	1/1:23,0:23:66.16:739,66,0	1/1:25,0:25:73.43:781,73,0	1/1:32,0:32:86:879,86,0	1/1:28,0:28:76.95:849,77,0	1/1:21,0:21:56.96:606,57,0	1/1:14,0:12:33.27:296,33,0	1/1:19,0:19:48.75:517,49,0	1/1:15,0:15:40.88:425,41,0	1/1:16,3:19:40.55:477,41,0	1/1:22,0:22:56.96:641,57,0	1/1:27,0:27:71.79:794,72,0	1/1:29,0:29:82.25:819,82,0	1/1:24,0:24:71.64:724,72,0	1/1:17,0:17:50.82:544,51,0	1/1:9,0:9:20.84:215,21,0
chr10	8591037	.	A	AG	17754.80	PASS	AB=0.927;AC=53;AF=0.946;AN=56;BaseQRankSum=-6.811;DP=689;FS=6.851;HRun=3;HaplotypeScore=182.1572;InbreedingCoeff=0.7776;MQ=64.62;MQ0=2;MQRankSum=2.486;QD=27.53;ReadPosRankSum=3.916;VQSLOD=3.4784;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,23:30:77.92:879,78,0	1/1:1,12:13:38.83:424,39,0	0/1:35,0:22:3.14:3,0,143	0/0:42,1:26:18.23:0,18,162	1/1:6,26:32:83.71:915,84,0	1/1:4,25:29:83.95:872,84,0	1/1:4,21:25:64.50:609,65,0	1/1:9,25:32:84.09:874,84,0	1/1:7,20:28:77.39:793,77,0	1/1:2,17:19:54.11:664,54,0	1/1:2,9:11:30:325,30,0	1/1:6,26:32:95.67:1059,96,0	1/1:7,23:30:69.75:714,70,0	1/1:2,21:23:68.61:660,69,0	1/1:3,22:25:74.84:802,75,0	1/1:6,24:30:87.11:982,87,0	1/1:6,23:29:78.13:860,78,0	1/1:4,17:21:56.69:544,57,0	1/1:5,9:12:35.94:380,36,0	1/1:5,14:19:51.02:533,51,0	1/1:2,13:15:41.76:427,42,0	1/1:6,13:19:44.94:467,45,0	1/1:3,19:22:56.82:620,57,0	1/1:3,23:26:74.34:829,74,0	1/1:10,19:29:86.72:912,87,0	1/1:3,21:24:71.68:863,72,0	1/1:4,15:19:47.13:502,47,0	1/1:3,6:9:23.70:243,24,0
chr10	8600016	.	CTT	C	1031.90	PASS	AB=0.680;AC=24;AF=0.429;AN=56;BaseQRankSum=2.288;DP=417;FS=3.012;HRun=17;HaplotypeScore=67.8438;InbreedingCoeff=0.4824;MQ=73.73;MQ0=2;MQRankSum=-1.379;QD=5.37;ReadPosRankSum=5.064;VQSLOD=-0.6972;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:28:44.40:0,44,417	0/0:8,0:9:17.33:0,17,138	0/0:13,0:10:17.33:0,17,143	0/0:13,0:8:0.18:0,0,46	0/0:9,0:10:16.28:0,16,131	0/0:26,0:28:59.80:0,60,516	0/0:17,2:24:10.13:0,10,452	0/1:14,15:31:0.71:196,0,1	1/1:1,0:6:15.47:63,15,0	1/1:8,2:13:8.16:86,8,0	1/1:2,1:4:5.71:35,6,0	0/1:9,3:13:27.70:28,0,64	0/0:11,0:13:22.94:0,23,168	0/1:6,2:13:15.86:16,0,56	1/1:1,0:9:21.92:93,22,0	0/0:14,0:14:29.45:0,29,336	0/0:28,0:30:67.13:0,67,607	0/0:22,1:25:59.85:0,60,617	0/1:9,2:17:39.68:40,0,103	0/0:3,0:4:5.38:0,5,44	0/1:5,1:14:9.44:16,0,9	1/1:6,3:10:15.67:107,16,0	1/1:3,3:7:11.57:83,12,0	1/1:6,5:14:6.22:142,6,0	0/0:12,0:14:23.39:0,23,234	0/1:14,7:22:13.70:130,0,14	1/1:5,1:9:5.19:62,5,0	1/1:3,5:9:17.59:130,18,0
chr10	8600059	.	CTT	C	3539.89	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-1.911;DP=457;FS=11.223;HRun=12;HaplotypeScore=78.4205;InbreedingCoeff=0.9906;MQ=64.92;MQ0=1;MQRankSum=0.671;QD=25.28;ReadPosRankSum=4.109;VQSLOD=2.7828;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,21:27:56.32:595,56,0	1/1:2,4:6:12:122,12,0	0/0:21,0:16:40.09:0,40,421	0/0:11,0:7:17.37:0,17,158	1/1:1,8:9:18.01:183,18,0	1/1:2,18:20:51.08:519,51,0	1/1:3,12:15:36.05:366,36,0	0/0:25,1:29:36.65:0,37,792	0/0:3,0:18:39.06:0,39,388	0/0:6,0:14:37.22:0,37,351	0/0:3,0:11:23.99:0,24,220	0/0:17,0:18:54.14:0,54,745	0/0:16,0:18:38.10:0,38,493	0/0:14,0:14:36.07:0,36,482	0/0:3,0:16:41.86:0,42,393	1/1:0,11:11:33.07:336,33,0	1/1:2,20:22:60.09:609,60,0	1/1:0,19:19:54.12:549,54,0	0/0:15,0:17:47.63:0,48,627	0/0:11,0:12:33.08:0,33,437	0/0:9,0:10:23.55:0,24,301	0/0:3,0:12:30.01:0,30,304	0/0:4,0:16:39.55:0,40,414	0/0:5,0:18:30.01:0,30,284	1/1:3,7:11:20.76:261,21,0	0/0:19,0:24:62.63:0,63,811	0/0:21,0:22:63.10:0,63,842	0/0:13,0:13:32.11:0,32,413
chr10	8600146	.	C	CGT	20939.51	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-6.610;DP=516;FS=14.887;HRun=0;HaplotypeScore=70.4258;InbreedingCoeff=0.8590;MQ=70.45;MQ0=9;MQRankSum=-4.568;QD=50.70;ReadPosRankSum=6.157;VQSLOD=4.4284;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,20:24:69.18:1302,69,0	1/1:1,11:12:30.06:598,30,0	0/0:51,0:28:32.72:0,33,775	0/0:51,0:32:1.70:0,2,518	1/1:0,11:12:33.11:664,33,0	1/1:9,12:21:60.06:973,60,0	1/1:2,23:25:54.19:1079,54,0	1/1:1,19:22:60.02:1027,60,0	1/1:0,7:7:21.07:418,21,0	1/1:0,10:10:30.10:604,30,0	1/1:0,8:8:24.08:450,24,0	1/1:1,15:15:39.09:748,39,0	1/1:0,20:22:51.18:1019,51,0	1/1:0,26:26:75.26:1497,75,0	1/1:3,11:13:36.12:713,36,0	1/1:0,12:11:33.11:668,33,0	1/1:4,34:38:99:1998,102,0	1/1:1,13:14:42.06:805,42,0	1/1:1,14:15:45.12:775,45,0	1/1:0,6:6:18.06:349,18,0	1/1:0,15:15:42.14:848,42,0	1/1:0,9:9:24.08:483,24,0	1/1:1,7:8:18.06:310,18,0	1/1:3,6:9:15.05:289,15,0	1/1:2,13:14:36.12:716,36,0	1/1:1,16:18:48.08:864,48,0	1/1:1,18:20:51.17:1017,51,0	1/1:0,14:15:36.03:728,36,0
chr10	8600162	.	T	TCC	1152.88	PASS	AB=0.974;AC=13;AF=0.232;AN=56;BaseQRankSum=-0.617;DP=500;FS=2.424;HRun=7;HaplotypeScore=132.1920;InbreedingCoeff=0.8268;MQ=74.20;MQ0=6;MQRankSum=-3.801;QD=11.41;ReadPosRankSum=-3.733;VQSLOD=-0.3039;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:70.06:0,70,784	0/0:9,0:9:24.07:0,24,277	0/0:38,0:23:49.80:0,50,470	0/1:36,0:26:25.93:26,0,238	0/0:11,0:11:24.06:0,24,278	0/0:15,0:15:42.10:0,42,477	0/0:29,0:29:72.18:0,72,821	0/0:21,0:21:45.11:0,45,524	0/0:7,0:7:21.06:0,21,244	1/1:9,1:10:15.03:196,15,0	1/1:5,3:8:6.49:100,6,0	0/0:18,0:18:36.09:0,36,408	0/0:22,0:22:48.12:0,48,559	0/0:26,0:26:63.18:0,63,733	1/1:7,10:16:42.10:659,42,0	0/0:13,0:13:33.08:0,33,384	0/0:41,0:41:99:0,102,1169	0/0:14,0:14:39.10:0,39,443	0/0:10,0:10:27.07:0,27,307	0/0:8,0:7:21.06:0,21,236	0/0:20,0:20:51.59:0,52,576	1/1:8,1:9:6.01:64,6,0	1/1:6,2:8:6.02:97,6,0	1/1:9,2:12:14.99:186,15,0	0/0:14,0:14:29.81:0,30,325	0/0:18,0:18:42.10:0,42,470	0/0:24,0:24:63.18:0,63,731	0/0:13,0:13:36.11:0,36,420
chr10	8600658	.	CACA	C	80.25	PASS	AB=0.839;AC=4;AF=0.071;AN=56;BaseQRankSum=5.357;DP=552;FS=21.725;HRun=0;HaplotypeScore=85.2751;InbreedingCoeff=-0.0696;MQ=82.80;MQ0=0;MQRankSum=-5.205;QD=1.18;ReadPosRankSum=-1.077;VQSLOD=0.1297;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:72.25:0,72,1759	0/1:3,4:7:99:131,0,201	0/0:20,0:20:60.19:0,60,1312	0/0:22,0:22:66.22:0,66,1503	0/0:19,0:19:54.17:0,54,1276	0/0:17,0:17:51.18:0,51,1243	0/0:17,0:17:51.17:0,51,1220	0/0:35,0:35:99:0,102,2433	0/0:11,0:11:33.11:0,33,811	0/0:9,0:9:27.09:0,27,666	0/0:12,0:12:33.11:0,33,811	0/0:27,0:27:78.27:0,78,1918	0/0:15,0:15:39.13:0,39,933	0/0:16,0:16:48.12:0,48,1125	0/0:25,0:25:72.25:0,72,1744	0/0:17,0:17:51.16:0,51,1176	0/0:36,0:35:99:0,102,2478	0/0:19,0:19:54.19:0,54,1323	0/0:17,0:17:51.17:0,51,1158	0/1:18,3:21:35.24:35,0,1228	0/0:24,0:24:72.25:0,72,1773	0/0:7,0:7:12.04:0,12,295	0/1:9,1:10:4.36:4,0,607	0/0:36,0:36:99:0,105,2561	0/0:22,0:22:60.15:0,60,1374	0/0:16,0:16:48.16:0,48,1128	0/0:18,0:18:51.18:0,51,1236	0/1:28,2:30:7.61:8,0,1824
chr10	8600828	.	T	TTAAA	7802.79	PASS	AC=30;AF=0.577;AN=52;BaseQRankSum=-7.972;DP=336;FS=6.578;HRun=0;HaplotypeScore=53.0011;InbreedingCoeff=0.8340;MQ=58.74;MQ0=0;MQRankSum=-3.653;QD=43.59;ReadPosRankSum=-0.927;VQSLOD=4.2296;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:36.12:0,36,592	0/0:4,0:4:9.03:0,9,149	0/0:7,0:6:7.78:0,8,70	0/0:9,0:8:1.25:0,1,3	0/0:21,0:21:48.16:0,48,793	0/0:27,0:27:60.21:0,60,995	0/0:14,0:14:33.10:0,33,524	1/1:23,19:43:72.21:1609,72,0	1/1:3,0:5:6.02:105,6,0	1/1:5,0:5:6.02:104,6,0	1/1:3,0:4:3.01:53,3,0	1/1:8,11:19:33.11:777,33,0	1/1:1,6:7:18.06:443,18,0	1/1:2,8:10:24.08:589,24,0	1/1:8,0:8:6.02:89,6,0	0/0:10,0:10:9.03:0,9,149	0/0:13,0:13:27.09:0,27,448	0/0:15,0:15:33.10:0,33,521	1/1:3,7:10:27.09:658,27,0	1/1:5,6:11:21.07:498,21,0	1/1:3,3:7:9.03:221,9,0	./.	./.	1/1:5,0:5:3.01:55,3,0	0/0:17,0:17:42.14:0,42,696	1/1:2,13:15:42.14:998,42,0	1/1:6,9:16:27.09:658,27,0	1/1:1,12:14:39.13:945,39,0
chr10	8601616	.	T	TCA	912.93	PASS	AB=0.560;AC=17;AF=0.304;AN=56;BaseQRankSum=0.042;DP=358;FS=5.951;HRun=0;HaplotypeScore=53.5815;InbreedingCoeff=0.8142;MQ=74.01;MQ0=14;MQRankSum=-1.715;QD=9.82;ReadPosRankSum=0.701;VQSLOD=2.5766;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:10,0:10:17.82:130,18,0	1/1:4,0:4:8.60:50,9,0	0/0:32,0:17:27.54:0,28,370	0/0:40,0:20:51.46:0,51,511	1/1:5,0:5:11.96:94,12,0	1/1:12,0:12:20.51:148,21,0	1/1:10,0:10:26.62:178,27,0	0/0:24,0:24:54.10:0,54,495	0/0:9,0:9:17.81:0,18,134	0/0:13,0:11:23.09:0,23,185	0/0:5,0:5:2.93:0,3,20	0/0:9,0:9:23.91:0,24,191	0/0:11,0:11:23.83:0,24,181	0/0:7,0:7:14.92:0,15,117	0/0:16,0:16:32.77:0,33,251	1/1:14,0:14:7.85:73,8,0	1/1:13,0:12:24.37:185,24,0	0/1:3,11:14:6.10:53,0,6	0/0:12,0:10:29.78:0,30,249	0/0:6,0:5:2.97:0,3,20	0/0:14,0:13:26.94:0,27,219	0/0:13,0:12:25.06:0,25,195	0/0:15,0:15:18.89:0,19,162	0/0:15,0:15:29.75:0,30,219	1/1:11,0:11:26.79:198,27,0	0/0:4,0:4:0.94:0,1,1	0/0:8,0:8:10.34:0,10,71	0/0:12,0:11:29.93:0,30,241
chr10	8602663	.	G	GA	9918.07	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-8.216;DP=695;FS=4.394;HRun=1;HaplotypeScore=86.4702;InbreedingCoeff=0.9999;MQ=81.08;MQ0=0;MQRankSum=-2.414;QD=40.48;ReadPosRankSum=1.565;VQSLOD=5.4151;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,45:46:99:1933,129,0	1/1:2,13:15:39.13:585,39,0	0/0:21,0:21:50.55:0,51,657	0/0:16,0:16:41.99:0,42,519	1/1:1,20:21:60.16:874,60,0	1/1:3,29:32:87.29:1304,87,0	1/1:0,25:25:72.24:1079,72,0	0/0:31,0:31:84.27:0,84,1091	0/0:37,0:37:99:0,108,1402	0/0:29,0:29:84.27:0,84,1091	0/0:14,0:14:39.13:0,39,506	0/0:29,0:29:84.27:0,84,1090	0/0:11,0:11:33.11:0,33,428	0/0:20,0:20:54.18:0,54,701	0/0:30,0:30:84.26:0,84,1076	1/1:1,26:27:39.30:1085,39,0	1/1:2,32:34:87.29:1304,87,0	1/1:3,21:24:60.20:899,60,0	0/0:20,0:20:54.17:0,54,699	0/0:15,0:15:45.13:0,45,570	0/0:35,0:35:99:0,102,1324	0/0:30,0:30:87.28:0,87,1129	0/0:17,0:17:51.17:0,51,662	0/0:22,0:22:54.18:0,54,701	1/1:0,21:21:57.19:854,57,0	0/0:29,0:29:84.24:0,84,1051	0/0:28,0:28:84.27:0,84,1090	0/0:16,0:16:48.16:0,48,622
chr10	8603083	.	AGAGAGAGAGAGAGAGAGAG	A	2158.43	PASS	AB=0.970;AC=34;AF=0.607;AN=56;BaseQRankSum=5.117;DP=518;FS=6.201;HRun=0;HaplotypeScore=133.1399;InbreedingCoeff=-0.0176;MQ=41.48;MQ0=72;MQRankSum=1.339;QD=5.16;ReadPosRankSum=-0.614;VQSLOD=2.1703;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:37,0:25:44.94:45,0,557	0/0:14,0:6:0.86:0,1,38	0/0:15,0:6:14.70:0,15,174	0/0:25,0:8:24.06:0,24,284	1/1:15,0:7:3.01:38,3,0	0/1:21,0:14:95.51:96,0,334	0/1:23,0:17:54.30:54,0,341	0/1:19,0:19:22.80:236,0,23	1/1:4,10:12:6.02:298,6,0	1/1:18,0:8:3.60:72,4,0	1/1:15,0:12:6.16:50,6,0	1/1:9,11:16:1.60:156,2,0	0/1:12,9:18:2.32:152,0,2	1/1:5,6:10:2.27:157,2,0	1/1:19,0:11:6.90:75,7,0	0/0:18,0:15:12.44:0,12,155	0/1:23,0:16:81.89:82,0,97	0/1:19,0:14:96.47:96,0,119	0/0:16,0:9:11.13:0,11,60	0/1:16,0:11:62.61:63,0,124	0/0:12,0:7:5.96:0,6,43	1/1:14,0:9:2.73:139,3,0	1/1:21,0:12:5.85:52,6,0	1/1:13,0:9:2.56:38,3,0	0/1:26,0:15:81.91:82,0,199	1/1:14,0:8:0.46:1,0,0	0/1:23,0:16:99:272,0,206	1/1:16,0:9:1.42:62,1,0
chr10	8603085	.	AGAGAGAGAGAGAGAGAG	A	2315.42	PASS	AB=0.994;AC=41;AF=0.732;AN=56;BaseQRankSum=4.810;DP=510;FS=2.880;HRun=0;HaplotypeScore=118.9968;InbreedingCoeff=0.0370;MQ=41.00;MQ0=73;MQRankSum=0.602;QD=5.10;ReadPosRankSum=0.418;VQSLOD=2.3438;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:35,0:23:50.98:51,0,316	1/1:14,0:5:1.55:4,2,0	0/0:16,0:7:17.92:0,18,205	0/0:24,0:8:24.06:0,24,284	1/1:15,0:6:3.01:38,3,0	0/1:22,0:15:95.62:96,0,221	0/1:24,0:17:57.75:58,0,167	1/1:18,0:18:15.75:258,16,0	1/1:14,0:12:6.02:252,6,0	1/1:18,0:7:4.27:73,4,0	1/1:15,0:12:3.90:40,4,0	1/1:20,0:16:1.75:124,2,0	0/1:20,0:17:1.12:121,0,1	1/1:11,0:10:2.03:125,2,0	1/1:18,0:10:7.26:76,7,0	0/1:18,0:15:1.13:1,0,37	1/1:22,2:17:3.40:178,3,0	0/1:17,1:13:71.75:159,0,72	0/0:15,0:8:4.88:0,5,13	0/1:14,0:9:32.87:33,0,101	1/1:12,0:7:2.98:22,3,0	1/1:13,0:8:2.01:124,2,0	1/1:21,0:12:4.26:41,4,0	1/1:13,0:9:2.94:38,3,0	0/1:24,0:13:84.78:110,0,85	0/1:15,0:8:0:0,0,0	1/1:19,3:15:7.02:430,7,0	1/1:16,0:8:1.47:10,1,0
chr10	8603091	.	AGAGAGAGAGAG	A	2378.49	PASS	AB=1.000;AC=44;AF=0.846;AN=52;BaseQRankSum=1.755;DP=449;FS=22.576;HRun=0;HaplotypeScore=70.2061;InbreedingCoeff=0.2179;MQ=41.33;MQ0=82;MQRankSum=2.657;QD=6.39;ReadPosRankSum=0.877;VQSLOD=-0.3711;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:20:52.93:102,0,53	1/1:13,0:3:4.26:41,4,0	0/0:15,0:8:18.59:0,19,207	0/0:28,0:10:30.08:0,30,364	1/1:19,0:9:12.04:153,12,0	1/1:26,0:16:4.26:144,4,0	1/1:22,0:14:5.40:75,5,0	1/1:19,0:12:19.25:263,19,0	1/1:14,0:11:6.02:168,6,0	1/1:15,0:4:8.47:113,8,0	1/1:7,0:5:3.01:38,3,0	1/1:16,0:12:2.17:83,2,0	1/1:14,0:11:2.08:82,2,0	1/1:8,0:6:3.01:84,3,0	1/1:15,0:7:6.02:74,6,0	1/1:7,7:11:3.01:103,3,0	1/1:20,0:12:3.48:86,3,0	1/1:17,0:11:8.21:151,8,0	0/0:13,0:6:1.89:0,2,4	0/1:16,0:8:22.53:102,0,23	./.	1/1:8,0:3:6.02:122,6,0	1/1:16,0:7:3.01:38,3,0	1/1:6,0:2:2.92:38,3,0	1/1:24,0:11:9.92:163,10,0	./.	1/1:19,0:12:8.46:252,8,0	1/1:11,0:4:2.45:37,2,0
chr10	8603862	.	ATT	A	8498.32	PASS	AB=0.551;AC=33;AF=0.589;AN=56;BaseQRankSum=-15.631;DP=603;FS=1.891;HRun=12;HaplotypeScore=100.7048;InbreedingCoeff=0.7697;MQ=68.60;MQ0=1;MQRankSum=-0.912;QD=21.09;ReadPosRankSum=5.628;VQSLOD=4.4433;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,35:39:99:1019,102,0	1/1:5,3:10:17.43:182,17,0	0/0:11,0:9:15.01:0,15,181	0/0:7,0:8:17.89:0,18,182	1/1:4,29:35:86.61:848,87,0	1/1:0,20:21:56.87:561,57,0	1/1:2,18:21:41.81:479,42,0	0/0:13,0:33:43.60:0,44,283	0/0:1,0:15:32.44:0,32,114	1/1:4,28:34:86.63:841,87,0	1/1:1,11:12:8.91:281,9,0	0/0:3,0:15:30.19:0,30,108	0/0:1,1:21:11.94:0,12,113	0/1:6,1:18:2.23:2,0,97	1/1:3,21:25:59.86:592,60,0	1/1:1,17:19:53.86:531,54,0	1/1:5,24:30:68.85:683,69,0	1/1:0,14:14:42.09:427,42,0	0/0:10,1:21:3.25:0,3,119	0/0:4,0:25:60.77:0,61,244	0/1:2,1:20:12.49:12,0,101	1/1:2,18:21:53.85:530,54,0	1/1:1,21:22:51.11:519,51,0	1/1:0,22:22:54.12:549,54,0	1/1:1,18:19:42.09:427,42,0	0/1:2,2:20:15.09:15,0,94	0/0:6,1:30:33.26:0,33,229	0/0:0,1:21:16.31:0,16,122
chr10	8605072	.	A	AGATG	14138.58	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-1.883;DP=781;FS=4.689;HRun=0;HaplotypeScore=124.4174;InbreedingCoeff=0.6458;MQ=56.24;MQ0=3;MQRankSum=-1.677;QD=19.83;ReadPosRankSum=4.244;VQSLOD=4.5794;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:39:12.04:187,12,0	1/1:5,0:13:8.76:96,9,0	0/0:41,0:26:27.09:0,27,424	0/0:27,0:22:15.45:0,15,353	1/1:7,0:28:23.76:270,24,0	1/1:6,0:26:15.05:260,15,0	1/1:31,0:31:36:411,36,0	1/1:27,8:36:8.90:467,9,0	1/1:5,1:27:24.08:409,24,0	1/1:16,0:16:10.26:129,10,0	1/1:14,0:14:3.01:49,3,0	1/1:13,19:32:42.14:1011,42,0	1/1:8,16:26:48.16:1156,48,0	1/1:6,17:23:36.12:863,36,0	1/1:34,0:34:24.08:341,24,0	1/1:8,0:30:12.04:206,12,0	1/1:28,0:28:46.37:437,46,0	1/1:17,1:29:6.02:105,6,0	1/1:15,12:27:48.08:933,48,0	1/1:7,24:32:63.09:1414,63,0	1/1:10,22:33:45.15:1087,45,0	1/1:31,0:31:6:70,6,0	1/1:18,0:18:3:27,3,0	1/1:23,0:23:7.55:41,8,0	1/1:5,0:22:9.03:156,9,0	1/1:10,21:33:75.23:1622,75,0	1/1:10,21:34:57.20:1376,57,0	1/1:8,20:28:42.14:1014,42,0
chr10	8605093	.	G	GATGGATGGATGGATGA	8801.80	PASS	AB=1.000;AC=26;AF=0.464;AN=56;BaseQRankSum=-1.044;DP=782;FS=3.284;HRun=0;HaplotypeScore=273.8601;InbreedingCoeff=-0.0521;MQ=65.27;MQ0=3;MQRankSum=-6.906;QD=16.36;ReadPosRankSum=0.413;VQSLOD=3.5812;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:42,0:42:99:545,0,324	0/1:10,0:10:38.94:207,0,39	0/0:30,0:20:47.27:0,47,977	0/0:33,0:29:55.96:0,56,946	0/1:25,0:25:97.41:358,0,97	0/1:26,0:26:99:560,0,120	0/1:30,0:30:99:748,0,146	0/1:30,0:30:89.11:89,0,429	0/1:28,0:28:20.90:301,0,21	1/1:1,3:19:50.87:1157,51,0	1/1:0,5:18:11.89:289,12,0	0/0:28,0:28:6.45:0,6,420	0/0:29,0:29:38.49:0,38,642	0/0:25,0:25:50.31:0,50,548	1/1:2,19:37:24.08:1834,24,0	0/1:29,0:29:79.90:449,0,80	0/1:26,0:26:99:577,0,126	0/1:20,0:20:49.12:466,0,49	0/1:24,0:24:60.73:61,0,362	0/1:35,0:35:2.14:2,0,641	0/0:33,0:33:3.62:0,4,521	1/1:1,17:38:20.79:351,21,0	1/1:0,4:13:3.01:159,3,0	1/1:4,13:31:8.89:262,9,0	0/1:24,0:24:99:327,0,145	0/1:33,0:33:60.33:60,0,665	0/0:38,0:38:77.20:0,77,929	0/0:28,0:28:48:0,48,539
chr10	8606688	.	C	CCA	6279.14	PASS	AB=0.662;AC=41;AF=0.732;AN=56;BaseQRankSum=-2.106;DP=976;FS=6.118;HRun=0;HaplotypeScore=182.4893;InbreedingCoeff=0.0753;MQ=58.55;MQ0=29;MQRankSum=-0.860;QD=7.34;ReadPosRankSum=1.198;VQSLOD=4.0732;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:24,1:54:5.99:51,6,0	1/1:3,0:10:2.67:25,3,0	0/0:44,0:30:10.54:0,11,130	0/0:53,0:25:11.98:0,12,120	1/1:12,0:33:2.07:10,2,0	1/1:11,0:19:6:52,6,0	1/1:34,1:53:12:105,12,0	0/1:23,10:33:2.65:353,0,3	0/1:5,0:31:3.41:21,0,3	1/1:23,1:35:35.65:244,36,0	1/1:17,0:26:2.57:12,3,0	0/1:17,11:31:4.13:365,0,4	0/1:18,19:36:13.93:683,0,14	0/1:24,17:42:52.35:824,0,52	1/1:22,0:36:5.98:48,6,0	1/1:18,0:36:21:183,21,0	1/1:22,1:35:7.24:55,7,0	1/1:10,0:20:20.16:149,20,0	0/1:10,6:18:7.02:291,0,7	0/1:7,13:19:34.64:367,0,35	0/1:42,32:79:99:828,0,263	1/1:28,0:36:10.86:83,11,0	0/0:7,1:22:1.55:0,2,4	1/1:21,0:38:3.50:17,3,0	1/1:11,0:36:15:131,15,0	1/1:27,15:44:15.34:544,15,0	0/1:8,10:19:0.94:425,0,1	1/1:9,11:20:27.09:414,27,0
chr10	8607099	.	T	TGG	1107.28	PASS	AB=0.597;AC=13;AF=0.232;AN=56;BaseQRankSum=6.645;DP=510;FS=18.245;HRun=9;HaplotypeScore=74.0148;InbreedingCoeff=0.7285;MQ=79.93;MQ0=0;MQRankSum=-1.219;QD=9.71;ReadPosRankSum=-0.944;VQSLOD=-0.0345;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:57.13:0,57,633	0/0:13,0:13:27.03:0,27,287	0/0:11,0:12:12.82:0,13,110	0/0:19,0:19:23.51:0,24,211	0/0:27,0:27:68.72:0,69,693	0/0:22,0:22:57.13:0,57,605	0/0:13,0:13:27.03:0,27,277	0/0:16,0:15:21.03:0,21,218	0/0:20,0:21:53.84:0,54,546	1/1:7,1:13:15.29:97,15,0	1/1:4,6:12:14.41:193,14,0	0/0:19,0:19:54.13:0,54,574	0/0:16,0:16:45.11:0,45,478	0/0:20,0:21:53.83:0,54,542	1/1:4,8:14:18.02:251,18,0	0/1:4,0:17:1.37:65,0,1	0/0:19,0:21:59.60:0,60,588	0/1:8,0:20:37.35:46,0,37	0/0:11,0:13:25.26:0,25,263	0/0:28,0:28:44.25:0,44,696	0/0:13,0:15:11.13:0,11,282	1/1:4,3:9:20.04:229,20,0	1/1:8,3:11:21.02:259,21,0	0/1:6,11:18:14.44:149,0,14	0/0:26,0:28:68.61:0,69,685	0/0:24,0:26:71.65:0,72,724	0/0:16,0:16:33.03:0,33,351	0/0:19,0:21:59.62:0,60,598
chr10	8609407	.	C	CAT	315.78	PASS	AB=0.970;AC=9;AF=0.161;AN=56;BaseQRankSum=2.382;DP=416;FS=1.879;HRun=0;HaplotypeScore=96.3812;InbreedingCoeff=0.0617;MQ=42.35;MQ0=21;MQRankSum=1.478;QD=2.70;ReadPosRankSum=3.167;VQSLOD=1.8899;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:21,0:19:7.58:78,0,8	0/1:11,0:10:6.50:74,0,7	0/0:18,0:7:11.13:0,11,117	0/0:21,0:14:32.19:0,32,325	0/1:15,0:15:26.60:46,0,27	0/0:9,0:7:5.99:0,6,48	0/1:14,5:18:22.60:23,0,145	0/0:21,0:17:34.58:0,35,267	0/0:17,0:17:15.05:0,15,198	0/0:21,0:18:43.83:0,44,323	0/0:18,0:18:0.64:0,1,177	0/0:16,0:15:18.47:0,18,140	0/1:10,0:10:25.41:25,0,68	0/0:16,0:16:8.97:0,9,71	0/0:13,0:13:17.94:0,18,141	0/1:13,0:13:12.06:147,0,12	1/1:8,0:8:7.06:55,7,0	0/0:7,0:7:20.64:0,21,146	0/0:9,0:8:20.69:0,21,133	0/0:9,0:9:5.91:0,6,40	0/0:15,0:14:8.87:0,9,69	0/0:9,0:9:2.98:0,3,24	0/0:18,0:18:13.71:0,14,100	0/0:27,0:26:23.83:0,24,190	0/1:20,0:18:0.04:0,0,79	0/0:17,0:16:42.96:0,43,285	0/0:13,0:12:29.72:0,30,214	0/0:5,0:5:11.56:0,12,74
chr10	8609426	.	A	ACACACACACG	4180.65	PASS	AB=1.000;AC=34;AF=0.607;AN=56;BaseQRankSum=0.920;DP=476;FS=6.130;HRun=0;HaplotypeScore=150.1367;InbreedingCoeff=0.5802;MQ=54.82;MQ0=12;MQRankSum=-2.274;QD=13.27;ReadPosRankSum=-1.511;VQSLOD=2.1965;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:18,0:18:85.68:86,0,94	0/1:10,0:9:50.90:55,0,51	0/0:19,0:13:39.05:0,39,403	0/0:27,0:20:43.23:0,43,486	0/0:20,0:20:2.07:0,2,161	0/0:16,0:14:20.98:0,21,175	0/0:19,0:18:0.53:0,1,142	1/1:24,0:20:31.01:233,31,0	0/1:14,0:14:48.99:69,0,49	1/1:17,0:16:39.81:474,40,0	1/1:17,0:17:29.78:257,30,0	1/1:16,0:16:27.75:401,28,0	1/1:10,0:11:21.24:235,21,0	0/0:3,11:20:0.47:0,0,1	1/1:16,0:16:20.68:147,21,0	0/1:15,0:15:50.77:51,0,90	0/0:13,0:13:9.38:0,9,165	0/0:7,0:7:17.72:0,18,132	1/1:13,0:13:29.30:204,29,0	1/1:15,0:15:26.69:179,27,0	1/1:22,0:21:18.14:120,18,0	1/1:12,0:12:17.78:119,18,0	1/1:19,0:19:21.67:146,22,0	1/1:32,0:31:28.70:246,29,0	0/0:20,0:18:20.90:0,21,165	1/1:22,0:21:50.84:619,51,0	1/1:15,0:14:35.47:315,35,0	1/1:6,0:6:14.17:228,14,0
chr10	8610905	.	GCTTTCGATGGCTCTCTT	G	20156.13	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=17.401;DP=637;FS=2.038;HRun=0;HaplotypeScore=351.5005;InbreedingCoeff=0.9948;MQ=84.42;MQ0=0;MQRankSum=-17.637;QD=103.36;ReadPosRankSum=4.519;VQSLOD=3.6419;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,15:22:39.13:1837,39,0	1/1:1,4:5:12.04:603,12,0	0/0:32,0:32:96.32:0,96,5901	0/0:16,0:16:48.16:0,48,3273	1/1:5,21:26:54.19:2524,54,0	1/1:4,16:20:45.15:2261,45,0	1/1:6,18:24:45.15:2260,45,0	0/0:28,0:28:84.29:0,84,6073	1/1:8,22:30:57.20:2864,57,0	0/0:36,0:36:99:0,108,7996	0/0:20,0:20:60.20:0,60,4826	0/0:21,0:21:63.22:0,63,5231	0/0:29,0:29:84.29:0,84,6539	0/0:23,0:23:69.24:0,69,5455	0/0:37,0:37:99:0,111,8825	1/1:3,23:26:63.22:3165,63,0	1/1:2,12:14:36.12:1764,36,0	1/1:1,7:8:21.07:921,21,0	0/0:19,0:19:54.19:0,54,3808	0/0:32,0:32:96.33:0,96,7965	0/0:17,0:17:51.18:0,51,4171	0/0:18,0:18:54.19:0,54,4401	0/0:26,0:26:78.27:0,78,6007	0/0:29,0:29:84.29:0,84,6689	1/1:5,15:20:39.13:1959,39,0	0/0:30,0:30:90.31:0,90,6868	0/0:13,0:13:39.13:0,39,3118	0/0:16,0:16:48.16:0,48,4011
chr10	8611519	.	T	TTC	8909.24	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=0.866;DP=576;FS=4.562;HRun=0;HaplotypeScore=74.8343;InbreedingCoeff=0.9973;MQ=81.91;MQ0=0;MQRankSum=-0.773;QD=43.25;ReadPosRankSum=3.806;VQSLOD=6.3982;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,28:29:72.25:1246,72,0	1/1:1,10:11:27.01:416,27,0	0/0:21,0:22:43.65:0,44,574	0/0:13,0:13:15.09:0,15,223	1/1:0,19:19:54.05:865,54,0	1/1:1,25:26:63.22:1088,63,0	1/1:2,17:19:45.15:779,45,0	0/0:40,0:40:99:0,99,1238	1/1:1,14:15:39.13:675,39,0	0/0:20,0:20:48.15:0,48,639	0/0:23,0:23:57.17:0,57,733	0/0:13,0:13:36.10:0,36,461	0/0:19,0:19:57.18:0,57,758	0/0:12,0:12:36.11:0,36,475	0/0:20,0:20:57.18:0,57,760	1/1:1,16:17:45.15:779,45,0	1/1:2,26:28:69.24:1194,69,0	1/1:1,18:18:45.15:777,45,0	0/0:22,0:22:63.19:0,63,826	0/0:30,0:30:81.13:0,81,1074	0/0:16,0:16:45.14:0,45,595	0/0:24,0:24:63.19:0,63,815	0/0:20,0:20:57.18:0,57,760	0/0:16,0:16:42.14:0,42,569	1/1:0,23:23:63.22:1090,63,0	0/0:28,0:28:84.26:0,84,1113	0/0:23,0:23:66.19:0,66,862	0/0:9,0:9:27.09:0,27,367
chr10	8613200	.	TACACAC	T	1919.91	PASS	AC=18;AF=0.360;AN=50;BaseQRankSum=3.695;DP=566;FS=0.000;HRun=0;HaplotypeScore=134.5310;InbreedingCoeff=0.7762;MQ=65.70;MQ0=11;MQRankSum=-5.236;QD=9.90;ReadPosRankSum=2.399;VQSLOD=2.3781;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:27.09:0,27,742	0/0:9,0:8:9.03:0,9,251	./.	./.	0/0:16,0:16:25.15:0,25,514	0/0:17,0:17:15.52:0,16,416	0/0:15,0:15:9.03:0,9,238	1/1:32,0:30:3:43,3,0	0/0:13,0:14:9.50:0,10,254	0/0:18,0:18:27.09:0,27,789	0/0:12,0:16:6.14:0,6,150	1/1:15,6:21:12.04:225,12,0	1/1:15,6:20:21.07:427,21,0	1/1:14,9:23:27.09:548,27,0	0/0:14,0:18:9.03:0,9,242	0/0:11,0:11:5.91:0,6,147	0/0:21,0:20:23.58:0,24,528	0/0:13,0:12:6.01:0,6,122	1/1:11,3:14:6.02:117,6,0	1/1:10,4:15:3.01:42,3,0	1/1:25,0:25:11.74:113,12,0	0/0:27,0:27:12.04:0,12,337	0/0:18,0:17:5.54:0,6,159	0/0:25,0:29:6.82:0,7,177	0/0:20,0:20:12.04:0,12,266	1/1:14,7:21:17.83:222,18,0	1/1:14,7:21:18.06:366,18,0	./.
chr10	8613241	.	A	ACACG	1491.88	PASS	AB=0.946;AC=24;AF=0.429;AN=56;BaseQRankSum=-1.263;DP=592;FS=28.534;HRun=0;HaplotypeScore=144.9826;InbreedingCoeff=0.3201;MQ=61.84;MQ0=8;MQRankSum=1.224;QD=4.12;ReadPosRankSum=-0.417;VQSLOD=1.1932;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:10,32:44:13.82:150,0,14	1/1:3,5:8:6:104,6,0	0/0:13,0:12:32.94:0,33,306	0/0:15,0:9:7.20:0,7,113	1/1:5,19:27:15.02:286,15,0	1/1:5,20:26:11.99:197,12,0	1/1:6,0:21:3.01:77,3,0	0/0:21,0:18:38.87:0,39,329	0/1:16,0:16:70.41:70,0,168	0/1:23,0:22:72.46:72,0,291	0/1:15,0:15:22.38:22,0,149	0/0:24,0:24:53.65:0,54,468	0/0:21,0:21:53.85:0,54,502	0/0:20,0:20:50.60:0,51,498	0/1:19,0:19:33.96:34,0,201	1/1:13,0:13:17.79:163,18,0	1/1:9,23:33:20.98:290,21,0	1/1:5,16:21:5.05:41,5,0	0/0:17,0:17:33.44:0,33,265	0/0:19,0:19:14.83:0,15,121	0/0:35,0:34:64.97:0,65,505	0/1:27,0:26:71.35:71,0,160	0/1:18,0:18:21.89:22,0,136	0/1:28,0:28:33.79:34,0,190	1/1:4,0:20:5.99:49,6,0	0/0:17,0:17:32.90:0,33,302	0/0:17,0:16:44.72:0,45,412	0/0:11,0:10:26.90:0,27,211
chr10	8613611	.	AATAT	A	9726.73	PASS	AB=0.551;AC=21;AF=0.375;AN=56;BaseQRankSum=16.758;DP=596;FS=1.890;HRun=0;HaplotypeScore=117.9059;InbreedingCoeff=0.9219;MQ=84.36;MQ0=0;MQRankSum=-7.356;QD=43.62;ReadPosRankSum=1.900;VQSLOD=5.3940;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,135,3500	0/0:4,0:4:12.04:0,12,317	0/0:22,0:22:54.10:0,54,1250	0/0:19,0:19:50.76:0,51,1170	0/0:24,0:24:72.23:0,72,1881	0/0:18,0:18:51.17:0,51,1385	0/0:21,0:21:60.21:0,60,1608	1/1:6,25:31:75.18:1286,75,0	1/1:1,17:18:36.12:697,36,0	0/0:32,0:32:93.30:0,93,2426	0/0:22,0:22:66.20:0,66,1634	1/1:2,21:23:57.20:1104,57,0	1/1:1,19:20:48.12:892,48,0	1/1:1,19:20:54.19:1041,54,0	0/0:13,0:13:39.13:0,39,1027	0/0:13,0:13:39.08:0,39,1005	0/0:27,0:27:81.26:0,81,2159	0/0:29,0:29:78.18:0,78,1930	1/1:2,16:18:48.10:826,48,0	1/1:2,16:18:47.96:735,48,0	1/1:7,13:20:33.07:601,33,0	0/0:20,0:20:60.21:0,60,1564	0/0:16,0:16:48.16:0,48,1260	0/0:25,0:25:69.20:0,69,1757	0/0:22,0:22:63.22:0,63,1702	0/1:5,22:27:12.97:1209,0,13	1/1:1,18:19:51.17:986,51,0	1/1:3,6:9:18.06:349,18,0
chr10	8614371	.	CCCCCA	C	6494.22	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=4.778;DP=656;FS=0.000;HRun=0;HaplotypeScore=291.0273;InbreedingCoeff=0.9797;MQ=67.43;MQ0=0;MQRankSum=-9.444;QD=39.84;ReadPosRankSum=-0.479;VQSLOD=3.7755;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:96.06:0,96,2738	0/0:7,0:7:21.07:0,21,620	0/0:19,0:19:37.37:0,37,939	0/0:20,0:20:32.73:0,33,918	0/0:20,0:20:33.11:0,33,906	0/0:28,0:28:72.25:0,72,2120	0/0:27,0:27:72.25:0,72,1993	0/0:32,0:32:84.28:0,84,2376	0/0:34,0:34:93.31:0,93,2616	1/1:10,21:31:75.26:1469,75,0	1/1:1,19:20:51.08:780,51,0	0/0:30,0:30:87.30:0,87,2567	0/0:19,0:19:57.20:0,57,1637	0/0:31,0:31:84.29:0,84,2432	1/1:7,40:47:99:2153,114,0	0/0:26,0:26:72.22:0,72,2015	0/0:14,0:14:42.14:0,42,1144	0/0:14,0:14:30.09:0,30,775	0/0:10,0:10:24.04:0,24,577	0/0:24,0:24:57.20:0,57,1648	0/0:25,0:25:57.03:0,57,1640	1/1:6,19:25:60.16:1097,60,0	1/1:7,16:23:48.12:820,48,0	1/1:5,12:17:17.93:174,18,0	0/0:17,0:17:42.14:0,42,1181	0/0:26,1:27:7.13:0,7,1564	0/0:21,0:21:60.21:0,60,1753	0/0:10,0:10:30.10:0,30,866
chr10	8614375	.	CA	C	881.93	PASS	AB=0.945;AC=7;AF=0.125;AN=56;BaseQRankSum=12.596;DP=649;FS=2.185;HRun=1;HaplotypeScore=273.4049;InbreedingCoeff=0.1976;MQ=62.56;MQ0=0;MQRankSum=-10.450;QD=5.69;ReadPosRankSum=0.208;VQSLOD=0.1703;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,102,1295	0/0:7,0:7:21.07:0,21,287	0/0:16,0:16:38.33:0,38,539	0/0:18,0:17:29.44:0,29,454	0/0:20,0:20:38.93:0,39,423	0/0:28,0:28:75.30:0,75,1031	0/0:26,0:26:69.16:0,69,920	0/0:32,0:32:93.15:0,93,1246	0/0:33,0:33:96.28:0,96,1295	0/1:29,2:31:99:177,0,131	0/1:20,1:21:20.68:152,0,21	0/0:29,0:29:87.29:0,87,1190	0/0:21,0:21:63.11:0,63,803	0/0:33,0:33:93.12:0,93,1181	1/1:43,1:44:38.18:376,38,0	0/0:25,0:25:75.16:0,75,976	0/0:16,0:16:44.08:0,44,523	0/0:14,0:14:39.08:0,39,494	0/0:12,0:12:33.02:0,33,376	0/0:23,0:23:63.10:0,63,795	0/0:26,0:26:66.18:0,66,856	0/1:21,2:23:28.83:140,0,29	0/1:19,2:21:13.83:158,0,14	0/1:15,0:15:15.57:16,0,116	0/0:17,0:17:41.61:0,42,516	0/0:29,0:29:70.05:0,70,912	0/0:20,0:20:60.14:0,60,794	0/0:10,0:10:30.10:0,30,418
chr10	8614377	.	CCCCA	C	2194.22	PASS	AB=0.975;AC=9;AF=0.161;AN=56;BaseQRankSum=12.000;DP=665;FS=3.289;HRun=0;HaplotypeScore=311.6238;InbreedingCoeff=0.6018;MQ=61.69;MQ0=0;MQRankSum=-8.920;QD=13.30;ReadPosRankSum=0.861;VQSLOD=2.8431;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,102,2596	0/0:7,0:7:21.07:0,21,559	0/0:17,0:17:24.49:0,24,878	0/0:18,0:17:31.54:0,32,839	0/0:20,0:20:33.11:0,33,857	0/0:29,0:29:78.26:0,78,1998	0/0:27,0:27:81.24:0,81,1909	0/0:34,0:34:99:0,99,2352	0/0:33,0:33:99:0,99,2469	0/1:32,2:34:37.41:540,0,37	1/1:24,0:24:38.06:253,38,0	0/0:29,0:29:87.30:0,87,2311	0/0:21,0:21:63.22:0,63,1613	0/0:32,0:32:93.31:0,93,2322	0/1:46,1:47:30.84:760,0,31	0/0:26,0:26:74.44:0,74,1852	0/0:17,0:17:48.16:0,48,1160	0/0:15,0:15:36.10:0,36,794	0/0:12,0:12:33.11:0,33,695	0/0:24,0:24:57.19:0,57,1507	0/0:24,0:24:57.19:0,57,1493	1/1:19,2:21:56.89:471,57,0	1/1:20,1:21:40.22:298,40,0	0/1:18,0:18:29.73:32,0,30	0/0:16,0:16:45.15:0,45,1112	0/0:28,0:28:44.16:0,44,1553	0/0:21,0:21:63.21:0,63,1627	0/0:10,0:10:30.10:0,30,786
chr10	8614395	.	CA	C	2877.19	PASS	AB=1.000;AC=49;AF=0.875;AN=56;BaseQRankSum=8.951;DP=640;FS=0.865;HRun=1;HaplotypeScore=297.8490;InbreedingCoeff=0.4968;MQ=60.94;MQ0=5;MQRankSum=-14.875;QD=4.71;ReadPosRankSum=2.344;VQSLOD=0.0656;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:37,0:37:65.70:235,66,0	1/1:5,0:5:12.05:41,12,0	0/0:14,0:14:15.48:0,15,133	0/0:15,0:15:24.86:0,25,141	1/1:22,0:22:31.26:128,31,0	1/1:29,0:29:45.75:169,46,0	1/1:26,0:26:59.01:200,59,0	1/1:26,0:26:11.04:59,11,0	0/1:32,0:30:21.14:36,0,21	1/1:32,0:31:37.84:137,38,0	1/1:26,0:26:40.25:168,40,0	1/1:34,0:33:27.92:147,28,0	1/1:17,0:17:29.69:106,30,0	1/1:33,0:33:0.99:89,1,0	1/1:41,0:41:82.89:301,83,0	1/1:29,0:29:53.58:183,54,0	1/1:15,0:15:17.60:62,18,0	1/1:10,0:10:11.25:34,11,0	0/1:13,0:13:1.23:16,0,1	1/1:18,3:21:21.11:132,21,0	0/1:20,0:20:0.93:25,0,1	1/1:27,0:27:38.38:170,38,0	1/1:22,1:23:45.97:187,46,0	1/1:16,0:16:12.52:46,13,0	1/1:19,0:19:25.62:102,26,0	1/1:25,1:26:33.09:124,33,0	1/1:22,0:22:18.02:93,18,0	1/1:10,0:7:5.08:23,5,0
chr10	8615311	.	AT	A	10267.68	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=4.067;DP=711;FS=19.165;HRun=8;HaplotypeScore=100.2355;InbreedingCoeff=0.9941;MQ=82.62;MQ0=0;MQRankSum=-1.128;QD=25.10;ReadPosRankSum=2.319;VQSLOD=3.5599;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:84.26:0,84,1014	0/0:10,0:10:27.08:0,27,326	0/0:25,0:25:45.25:0,45,609	0/0:15,0:16:11.71:0,12,258	0/0:39,0:39:99:0,108,1292	0/0:28,0:27:78.24:0,78,942	0/0:22,0:22:57.17:0,57,688	1/1:5,36:41:99:980,102,0	0/0:23,0:23:69.21:0,69,829	1/1:4,35:39:99:1014,105,0	1/1:0,18:18:51.08:492,51,0	1/1:2,23:25:69.11:666,69,0	1/1:1,24:25:60.10:579,60,0	1/1:3,23:26:66.10:637,66,0	1/1:6,28:34:75.11:724,75,0	0/0:29,0:29:78.24:0,78,942	0/0:37,0:37:99:0,105,1268	0/0:15,0:15:42.13:0,42,507	1/1:1,18:19:54.04:512,54,0	1/1:2,23:25:66.10:637,66,0	1/1:2,15:17:45.07:435,45,0	1/1:1,34:35:99:985,102,0	1/1:2,26:28:59.53:579,60,0	1/1:0,14:14:39.06:377,39,0	0/0:26,0:25:72.21:0,72,861	1/1:1,31:32:93.15:897,93,0	1/1:3,21:24:60.09:579,60,0	1/1:0,7:7:18.02:174,18,0
chr10	8615535	.	AGAT	A	25129.66	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=0.010;DP=903;FS=0.000;HRun=0;HaplotypeScore=141.0033;InbreedingCoeff=0.8961;MQ=78.58;MQ0=1;MQRankSum=-8.495;QD=30.39;ReadPosRankSum=6.605;VQSLOD=4.5510;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,45:50:90.26:1292,90,0	1/1:1,13:14:36.12:530,36,0	0/0:32,1:32:2.66:0,3,951	0/0:42,0:41:66.18:0,66,1194	1/1:4,18:22:51.02:676,51,0	1/1:1,20:21:54.01:795,54,0	1/1:4,33:37:81.27:1193,81,0	1/1:10,30:40:90.25:1227,90,0	1/1:7,29:36:69.23:1016,69,0	1/1:4,30:35:93.30:1340,93,0	1/1:2,12:14:27.05:373,27,0	1/1:5,27:33:66.22:959,66,0	1/1:3,36:39:87.29:1281,87,0	1/1:8,36:44:87.29:1280,87,0	1/1:4,38:42:87.29:1281,87,0	1/1:8,47:55:99:1451,99,0	1/1:10,28:38:63.21:919,63,0	1/1:10,16:26:45.11:638,45,0	1/1:6,13:19:39.09:542,39,0	1/1:4,28:32:84.15:1164,84,0	1/1:8,38:46:78.22:1116,78,0	1/1:4,21:25:57.15:808,57,0	1/1:2,15:17:35.91:506,36,0	1/1:6,40:46:93.26:1344,93,0	1/1:3,22:25:54.18:795,54,0	1/1:2,20:22:60.20:881,60,0	1/1:4,33:37:87.29:1281,87,0	1/1:1,11:12:30.10:441,30,0
chr10	8615976	.	CTGT	C	3819.14	PASS	AB=1.000;AC=34;AF=0.607;AN=56;BaseQRankSum=-7.237;DP=683;FS=24.830;HRun=0;HaplotypeScore=158.8794;InbreedingCoeff=-0.0774;MQ=70.03;MQ0=5;MQRankSum=2.136;QD=6.60;ReadPosRankSum=0.053;VQSLOD=1.0528;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:29,2:30:51.70:352,52,0	1/1:10,0:10:16.34:93,16,0	0/0:25,0:21:32.63:0,33,464	0/0:22,0:21:43.55:0,44,657	1/1:22,0:22:57.66:314,58,0	1/1:17,1:17:30.69:199,31,0	1/1:23,0:23:43.15:273,43,0	0/1:31,0:33:99:123,0,225	1/1:23,0:23:49.38:505,49,0	0/1:27,0:27:99:151,0,160	0/1:23,0:23:70.88:71,0,236	0/1:25,0:25:49.81:50,0,94	0/0:28,0:28:10.29:0,10,175	0/1:17,0:17:13.56:14,0,30	0/0:28,0:28:2.56:0,3,559	1/1:25,1:26:53.51:313,54,0	1/1:20,0:20:41.95:223,42,0	1/1:20,0:19:27.81:143,28,0	0/1:25,0:24:95.17:95,0,162	0/1:36,0:36:99:160,0,251	0/1:13,0:13:30.26:30,0,63	0/1:27,0:27:55.66:56,0,253	0/1:17,0:17:45.29:45,0,184	0/1:25,0:24:62.33:62,0,365	1/1:40,1:41:61.44:365,61,0	0/1:39,0:40:99:121,0,455	0/1:24,0:23:51.65:52,0,254	0/1:13,0:13:9.58:10,0,75
chr10	8615978	.	GTTGTT	G	1340.47	PASS	AB=0.998;AC=16;AF=0.286;AN=56;BaseQRankSum=-9.531;DP=744;FS=7.899;HRun=0;HaplotypeScore=200.4717;InbreedingCoeff=-0.1895;MQ=67.85;MQ0=5;MQRankSum=1.751;QD=3.26;ReadPosRankSum=-4.186;VQSLOD=0.6979;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:50.88:0,51,286	0/0:10,0:10:4.12:0,4,100	0/0:24,0:21:44.60:0,45,882	0/0:23,0:21:51.40:0,51,940	0/0:26,0:26:55.59:0,56,342	0/0:19,0:18:29.53:0,30,163	0/0:21,0:21:46.57:0,47,262	0/1:16,0:43:17.67:18,0,893	1/1:0,23:23:51.17:1046,51,0	0/1:25,0:27:84.60:85,0,504	0/1:24,0:26:35.75:36,0,690	0/1:6,0:30:45.16:45,0,358	0/0:4,0:33:13.05:0,13,522	0/1:6,0:21:9.81:10,0,152	0/0:33,0:32:31.01:0,31,1332	0/0:27,0:28:51.86:0,52,266	0/0:22,0:22:45.31:0,45,236	0/0:20,0:19:28.29:0,28,150	0/1:19,0:23:38.76:39,0,472	0/1:32,0:40:65.92:66,0,876	0/1:3,0:17:2.79:3,0,250	0/1:26,0:26:2.09:2,0,694	0/1:16,0:18:28.22:28,0,566	0/1:26,0:26:29.93:30,0,907	0/0:43,0:43:66.34:0,66,361	0/1:38,0:45:45.01:45,0,1368	0/1:16,0:25:42.50:42,0,759	0/1:4,0:18:2.71:3,0,280
chr10	8615979	.	TTG	T	8560.74	PASS	AB=0.995;AC=38;AF=0.679;AN=56;BaseQRankSum=-6.649;DP=738;FS=25.155;HRun=0;HaplotypeScore=139.9748;InbreedingCoeff=-0.1507;MQ=66.62;MQ0=5;MQRankSum=2.788;QD=12.37;ReadPosRankSum=-0.247;VQSLOD=2.7737;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,26:29:62.59:851,63,0	1/1:4,6:10:21.22:258,21,0	0/0:24,0:20:44.44:0,44,542	0/0:21,0:20:25.23:0,25,535	1/1:1,25:26:71.21:865,71,0	1/1:2,17:18:35.85:495,36,0	1/1:3,17:21:53.58:735,54,0	0/1:43,0:43:29.10:234,0,29	1/1:23,0:23:47.15:409,47,0	0/1:27,0:27:30.67:213,0,31	0/1:25,1:26:82.46:179,0,82	0/1:29,0:29:2.71:74,0,3	0/1:31,0:31:18.65:19,0,19	1/1:21,0:21:2.66:27,3,0	0/1:34,0:33:99:100,0,238	1/1:3,25:28:59.79:848,60,0	1/1:2,20:22:47.90:694,48,0	1/1:0,20:19:33.11:476,33,0	0/1:24,0:23:44.03:121,0,44	0/1:40,0:40:47.39:241,0,47	1/1:16,0:16:4.52:54,5,0	0/1:25,1:26:75.28:182,0,75	0/1:17,0:17:57.84:69,0,58	0/1:27,0:26:79.44:79,0,151	1/1:5,38:43:73.52:1015,74,0	0/1:45,0:45:99:203,0,131	0/1:26,0:25:51.29:93,0,51	0/1:18,0:18:8.09:27,0,8
chr10	8615980	.	TG	T	8789.63	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=1.130;DP=729;FS=13.358;HRun=1;HaplotypeScore=128.6182;InbreedingCoeff=0.9829;MQ=65.42;MQ0=5;MQRankSum=-6.030;QD=12.85;ReadPosRankSum=1.981;VQSLOD=2.7083;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:28,2:29:62.84:526,63,0	1/1:7,3:10:23.89:199,24,0	0/0:22,1:19:35.86:0,36,441	0/0:21,1:19:45.37:0,45,508	1/1:25,1:26:71.74:599,72,0	1/1:18,1:18:35.91:299,36,0	1/1:20,2:22:53.88:459,54,0	1/1:40,0:40:69.01:434,69,0	1/1:23,0:23:47.44:319,47,0	1/1:28,0:28:52.87:379,53,0	1/1:24,2:26:39.20:403,39,0	1/1:29,0:29:29.01:186,29,0	1/1:31,0:31:36.83:176,37,0	1/1:20,0:20:14.94:94,15,0	1/1:33,0:32:23.90:210,24,0	1/1:27,1:28:58.34:449,58,0	1/1:20,2:22:47.89:395,48,0	1/1:20,0:19:32.27:236,32,0	1/1:20,1:20:42.40:293,42,0	1/1:40,0:40:82.34:573,82,0	1/1:16,0:16:23.10:142,23,0	1/1:22,3:25:37.69:356,38,0	1/1:17,1:18:23.15:181,23,0	1/1:26,1:26:24.35:224,24,0	1/1:40,3:43:73.66:609,74,0	1/1:44,0:44:81.46:545,81,0	1/1:25,1:25:64.07:377,64,0	1/1:17,0:17:20.44:126,20,0
chr10	8617101	.	CCT	C	921.30	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.732;DP=762;FS=3.884;HRun=0;HaplotypeScore=82.7422;InbreedingCoeff=0.9983;MQ=88.86;MQ0=1;MQRankSum=-4.337;QD=34.12;ReadPosRankSum=2.106;VQSLOD=5.9783;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:57.20:0,57,1067	0/0:21,0:21:63.22:0,63,1174	0/0:35,0:35:96.20:0,96,1664	0/0:29,0:29:81.26:0,81,1404	0/0:34,0:34:96.33:0,96,1798	0/0:40,0:40:99:0,120,2126	0/0:32,0:32:93.30:0,93,1710	0/0:41,0:41:99:0,117,2080	1/1:1,26:26:69.23:1016,69,0	0/0:31,0:31:90.30:0,90,1658	0/0:28,0:28:81.27:0,81,1482	0/0:27,0:27:78.27:0,78,1450	0/0:19,0:19:51.17:0,51,955	0/0:22,0:22:66.21:0,66,1194	0/0:36,0:36:99:0,105,1960	0/0:22,1:23:25.01:0,25,1098	0/0:21,0:21:60.19:0,60,1092	0/0:16,0:16:48.08:0,48,809	0/0:15,0:15:42.13:0,42,719	0/0:30,0:30:87.28:0,87,1570	0/0:32,0:32:90.31:0,90,1686	0/0:23,0:23:66.20:0,66,1198	0/0:23,0:23:69.24:0,69,1292	0/0:25,0:25:72.25:0,72,1325	0/0:35,0:35:99:0,105,1924	0/0:25,0:25:75.25:0,75,1376	0/0:36,0:35:99:0,108,1942	0/0:16,0:16:48.16:0,48,899
chr10	8617637	.	C	CGAAT	8902.04	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=5.965;DP=723;FS=0.000;HRun=0;HaplotypeScore=165.2435;InbreedingCoeff=0.9940;MQ=90.89;MQ0=0;MQRankSum=-14.390;QD=61.82;ReadPosRankSum=-2.675;VQSLOD=5.6271;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,102,1829	0/0:8,0:8:24.08:0,24,447	0/0:37,0:37:72.80:0,73,1491	0/0:27,0:27:78.01:0,78,1244	0/0:32,0:32:96.21:0,96,1667	0/0:20,0:20:60.18:0,60,1056	0/0:18,0:18:51.17:0,51,951	0/0:44,0:44:99:0,123,2223	0/0:19,0:19:54.19:0,54,1006	1/1:2,31:37:99:2645,108,0	1/1:1,17:18:45.15:1151,45,0	0/0:24,0:24:66.21:0,66,1194	0/0:23,0:23:54.19:0,54,1006	0/0:32,0:32:90.29:0,90,1643	1/1:5,23:30:13.33:1652,13,0	0/0:27,0:27:81.28:0,81,1510	0/0:32,0:32:78.20:0,78,1385	0/0:24,0:25:57.20:0,57,1047	0/0:26,0:26:66.23:0,66,1211	0/0:27,0:27:81.28:0,81,1503	0/0:24,0:24:66.12:0,66,1128	1/1:1,18:23:54.18:1301,54,0	1/1:2,19:23:60.21:1542,60,0	1/1:3,10:13:24.08:611,24,0	0/0:27,0:27:75.22:0,75,1363	0/0:25,0:25:72.25:0,72,1342	0/0:35,0:35:90.31:0,90,1663	0/0:8,0:8:24.08:0,24,447
chr10	8618457	.	CA	C	4622.16	PASS	AB=0.993;AC=49;AF=0.875;AN=56;BaseQRankSum=3.902;DP=663;FS=5.318;HRun=1;HaplotypeScore=139.4820;InbreedingCoeff=0.0658;MQ=86.43;MQ0=0;MQRankSum=-5.579;QD=7.23;ReadPosRankSum=11.278;VQSLOD=0.7226;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:43,0:43:38:255,0,38	1/1:11,0:11:27.95:105,28,0	0/0:24,0:24:2.51:0,3,243	0/1:26,0:26:24.13:24,0,198	1/1:23,1:24:13.56:196,14,0	1/1:28,0:28:20.67:194,21,0	1/1:22,0:22:31.93:181,32,0	0/1:26,1:27:56.50:80,0,56	1/1:19,1:20:46.73:206,47,0	1/1:20,0:20:41.10:152,41,0	1/1:30,0:30:4.05:182,4,0	1/1:25,1:26:35.84:248,36,0	1/1:22,0:22:31.83:189,32,0	1/1:18,0:18:44.25:182,44,0	0/1:20,0:20:22.93:107,0,23	1/1:21,0:21:49.98:182,50,0	1/1:28,0:28:24.52:192,25,0	1/1:20,0:20:26.35:160,26,0	1/1:22,0:22:23.15:127,23,0	1/1:24,0:24:38.42:244,38,0	1/1:29,0:29:28.75:202,29,0	1/1:26,0:26:66.60:274,67,0	1/1:22,0:22:28.79:183,29,0	1/1:27,0:27:14.65:168,15,0	1/1:24,0:24:58.35:222,58,0	1/1:22,0:22:18.92:108,19,0	0/1:26,0:26:31.32:153,0,31	1/1:11,0:11:26.28:104,26,0
chr10	8619445	.	GATAT	G	1413.23	PASS	AC=16;AF=0.400;AN=40;BaseQRankSum=-1.813;DP=211;FS=11.586;HRun=0;HaplotypeScore=53.4423;InbreedingCoeff=0.6404;MQ=94.71;MQ0=3;MQRankSum=-0.053;QD=22.79;ReadPosRankSum=4.512;VQSLOD=1.8836;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,2:2:3.01:50,3,0	1/1:0,3:3:6.02:100,6,0	0/0:21,0:11:11.84:0,12,85	0/0:46,0:27:5.65:0,6,107	1/1:2,7:9:15.05:251,15,0	1/1:4,5:9:15.05:251,15,0	0/0:1,0:2:2.74:0,3,12	0/0:27,0:35:70.85:0,71,1122	./.	0/0:2,0:2:3:0,3,27	./.	./.	0/0:6,0:6:3.01:0,3,39	./.	./.	1/1:2,3:7:9.02:128,9,0	1/1:3,4:7:9.03:150,9,0	1/1:5,8:13:24.08:379,24,0	0/0:6,0:6:10.27:0,10,179	0/0:4,0:4:1.25:0,1,3	0/0:1,0:2:3.01:0,3,53	./.	./.	./.	1/1:2,9:11:15.05:251,15,0	0/0:3,0:3:1.55:0,2,4	0/0:5,0:6:9.03:0,9,201	0/0:2,0:3:4.57:0,5,57
chr10	8619491	.	G	GAAGT	9836.29	PASS	AC=32;AF=0.593;AN=54;BaseQRankSum=-7.979;DP=264;FS=0.579;HRun=0;HaplotypeScore=46.0750;InbreedingCoeff=0.9184;MQ=84.84;MQ0=1;MQRankSum=-7.609;QD=65.58;ReadPosRankSum=-1.491;VQSLOD=6.0850;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:8:18.06:0,18,335	0/0:1,0:1:3.01:0,3,56	0/0:13,0:13:30.05:0,30,476	0/0:16,0:13:26.89:0,27,377	0/0:9,0:9:27.09:0,27,504	0/0:15,0:15:42.14:0,42,783	0/0:3,0:3:9.03:0,9,168	1/1:2,34:41:99:2924,120,0	1/1:0,4:4:9.03:239,9,0	1/1:0,6:6:18.06:479,18,0	1/1:0,6:6:18.06:478,18,0	1/1:0,8:10:24.08:636,24,0	1/1:1,5:6:15.05:399,15,0	1/1:0,8:8:21.07:556,21,0	1/1:0,6:6:9.03:238,9,0	0/0:6,0:6:15.05:0,15,280	0/0:10,0:10:30.09:0,30,530	0/0:16,0:14:33.06:0,33,546	1/1:1,6:7:21.06:482,21,0	1/1:1,9:10:27.02:647,27,0	1/1:1,3:4:9.03:237,9,0	1/1:0,8:8:24.08:636,24,0	1/1:0,6:6:14.97:334,15,0	./.	0/0:13,0:13:39.10:0,39,636	1/1:1,10:11:26.83:676,27,0	1/1:0,13:14:24.08:637,24,0	1/1:0,3:3:9.03:240,9,0
chr10	8620967	.	A	AT	15539.97	PASS	AB=0.519;AC=19;AF=0.339;AN=56;BaseQRankSum=-16.915;DP=949;FS=0.505;HRun=0;HaplotypeScore=96.0545;InbreedingCoeff=0.9465;MQ=86.17;MQ0=0;MQRankSum=-4.562;QD=42.69;ReadPosRankSum=1.961;VQSLOD=5.1049;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,138,1888	0/0:12,0:12:36.12:0,36,491	0/0:42,0:41:99:0,122,1627	0/0:43,0:42:99:0,120,1638	0/0:33,0:33:93.31:0,93,1277	0/0:18,0:18:54.16:0,54,729	0/0:39,0:39:99:0,117,1586	1/1:0,26:26:75.21:1125,75,0	0/0:37,0:37:99:0,111,1543	0/0:24,0:24:72.23:0,72,990	0/0:26,0:26:75.21:0,75,1025	1/1:0,37:37:99:1629,102,0	1/1:2,51:53:99:2203,138,0	1/1:0,38:38:99:1677,105,0	0/0:35,0:34:99:0,105,1432	0/0:32,0:32:96.30:0,96,1315	0/0:36,0:35:99:0,108,1509	0/0:15,0:15:45.14:0,45,611	1/1:3,30:33:96.25:1435,96,0	1/1:0,39:39:99:1722,108,0	1/1:0,70:70:99:2972,187,0	0/0:21,0:21:57.19:0,57,796	0/0:34,0:34:99:0,102,1405	0/0:51,0:51:99:0,150,2078	0/0:37,0:37:99:0,102,1412	0/1:2,25:27:2.63:1091,0,3	1/1:1,31:32:93.28:1451,93,0	1/1:0,9:9:15.05:234,15,0
chr10	8621636	.	GA	G	940.01	PASS	AB=0.816;AC=20;AF=0.357;AN=56;BaseQRankSum=0.051;DP=475;FS=32.284;HRun=14;HaplotypeScore=85.2945;InbreedingCoeff=0.3814;MQ=47.42;MQ0=17;MQRankSum=-2.713;QD=4.25;ReadPosRankSum=2.950;VQSLOD=0.0014;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:31:45.15:0,45,507	0/0:6,0:5:9:0,9,79	0/0:5,0:4:3:0,3,28	0/0:6,0:5:5.69:0,6,31	0/0:29,2:31:6.34:0,6,178	0/1:25,1:26:27.27:27,0,314	0/0:22,1:22:6.50:0,6,239	0/1:10,6:18:22.45:116,0,22	0/0:13,0:13:26.87:0,27,226	0/1:19,1:19:2.55:3,0,120	0/0:17,1:18:9.27:0,9,194	0/1:9,7:17:26.20:85,0,26	1/1:18,3:22:7.29:152,7,0	1/1:12,3:14:16.84:108,17,0	0/0:9,0:8:14.15:0,14,142	0/1:14,1:14:17.17:17,0,115	0/0:26,1:23:6.68:0,7,227	0/0:13,1:14:26.54:0,27,222	1/1:7,8:15:28.69:187,29,0	1/1:10,8:18:11.69:82,12,0	1/1:6,5:11:7.88:47,8,0	0/0:19,1:19:23.66:0,24,199	0/0:13,0:14:17.93:0,18,150	0/0:15,0:13:2.53:0,3,96	0/0:17,0:17:35.86:0,36,303	1/1:11,7:18:29.65:204,30,0	0/1:8,4:14:29:73,0,29	1/1:4,0:2:2.96:21,3,0
chr10	8621655	.	C	CA	9352.61	PASS	AB=0.656;AC=51;AF=0.911;AN=56;BaseQRankSum=-3.885;DP=543;FS=8.486;HRun=9;HaplotypeScore=77.3795;InbreedingCoeff=0.7321;MQ=56.83;MQ0=14;MQRankSum=-0.859;QD=18.13;ReadPosRankSum=4.013;VQSLOD=4.7942;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:10,29:38:87.69:954,88,0	1/1:1,6:7:18.05:199,18,0	0/0:13,0:10:20.21:0,20,151	0/0:14,0:11:3.14:0,3,140	1/1:9,17:26:57.14:622,57,0	1/1:4,21:25:56.98:605,57,0	1/1:6,22:27:56.99:611,57,0	1/1:7,25:31:63.15:681,63,0	1/1:7,1:15:17.08:86,17,0	1/1:9,0:19:25.16:119,25,0	1/1:6,0:18:34.23:173,34,0	0/1:10,11:21:1.12:226,0,1	1/1:12,12:24:54.15:597,54,0	1/1:7,8:13:30.08:331,30,0	1/1:7,0:17:17.09:88,17,0	1/1:4,15:16:35.88:398,36,0	1/1:10,20:26:39.63:659,40,0	1/1:5,10:15:30.08:332,30,0	1/1:7,8:16:32.92:344,33,0	1/1:6,15:21:39.11:431,39,0	1/1:3,8:13:18.01:186,18,0	1/1:9,0:15:23.29:115,23,0	1/1:8,0:19:19.68:112,20,0	1/1:5,0:10:14.24:72,14,0	1/1:2,11:13:24.06:266,24,0	1/1:12,13:25:57.06:601,57,0	1/1:7,13:20:38.94:412,39,0	1/1:1,3:4:12.03:133,12,0
chr10	8621909	.	G	GT	3039.41	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-10.483;DP=586;FS=1.258;HRun=12;HaplotypeScore=75.4439;InbreedingCoeff=0.9148;MQ=72.48;MQ0=0;MQRankSum=1.580;QD=15.75;ReadPosRankSum=0.254;VQSLOD=4.5516;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,35:43:9.33:560,9,0	1/1:1,5:6:15.02:146,15,0	0/0:12,0:11:20.44:0,20,147	0/0:15,0:15:0.81:0,1,44	1/1:5,23:28:33.29:414,33,0	1/1:4,8:12:27.04:263,27,0	1/1:5,17:22:45.01:427,45,0	0/0:26,0:28:21.93:0,22,271	0/0:3,0:14:21.31:0,21,75	0/0:5,0:22:33.66:0,34,105	0/0:2,0:18:32.58:0,33,94	0/0:16,0:16:32.49:0,32,251	0/0:22,0:24:42.60:0,43,295	0/0:19,1:20:15.54:0,16,275	0/0:4,0:25:41.67:0,42,134	1/1:3,13:16:31.76:319,32,0	1/1:7,32:39:37.31:686,37,0	1/1:3,12:15:8.27:241,8,0	0/0:26,1:27:36.35:0,36,426	0/0:25,0:26:46.37:0,46,321	0/0:9,0:9:8.86:0,9,66	0/0:3,0:20:20.26:0,20,59	0/0:6,0:26:38.62:0,39,112	0/0:3,0:19:29.21:0,29,88	1/1:0,12:12:20.95:192,21,0	0/0:23,0:23:7.60:0,8,206	0/0:34,1:35:38.78:0,39,447	0/0:14,0:14:38.74:0,39,280
chr10	8622420	.	G	GT	5108.93	PASS	AB=0.674;AC=18;AF=0.321;AN=56;BaseQRankSum=-11.979;DP=653;FS=10.473;HRun=11;HaplotypeScore=68.1776;InbreedingCoeff=0.6339;MQ=73.88;MQ0=0;MQRankSum=0.170;QD=17.44;ReadPosRankSum=2.668;VQSLOD=5.5046;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,36:44:69.55:845,70,0	0/1:6,12:18:10.20:269,0,10	0/1:19,1:20:42.75:43,0,87	0/0:14,0:14:3.98:0,4,75	1/1:7,15:23:51.70:479,52,0	1/1:6,23:30:57.83:564,58,0	1/1:3,15:18:18.85:372,19,0	0/0:32,1:33:29.24:0,29,407	1/1:4,19:24:30.97:479,31,0	0/0:26,0:26:47.75:0,48,367	0/0:18,1:19:20.34:0,20,339	0/0:20,1:22:31.36:0,31,416	0/0:22,0:22:33.82:0,34,342	0/0:20,0:21:52.83:0,53,400	0/0:22,0:22:59.74:0,60,460	1/1:5,26:31:65.91:659,66,0	1/1:5,28:33:51.91:708,52,0	0/1:6,19:26:15.74:387,0,16	0/0:21,1:24:7.18:0,7,293	0/0:18,1:19:17.36:0,17,317	0/0:11,1:14:7.65:0,8,212	0/0:18,0:18:47.80:0,48,371	0/0:23,0:23:59.71:0,60,456	0/0:15,0:15:29.81:0,30,232	0/1:6,18:26:5.13:305,0,5	0/0:25,0:26:58.75:0,59,445	0/0:30,1:31:44.25:0,44,526	0/0:11,0:11:2.87:0,3,121
chr10	8623605	.	ATTT	A	8199.72	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=7.850;DP=494;FS=6.297;HRun=14;HaplotypeScore=85.7024;InbreedingCoeff=0.9765;MQ=76.23;MQ0=2;MQRankSum=-3.833;QD=27.33;ReadPosRankSum=2.645;VQSLOD=4.3117;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:42.12:0,42,689	0/0:14,0:14:36.10:0,36,643	0/0:24,0:17:7.50:0,8,124	0/0:17,0:15:10.72:0,11,127	0/0:30,0:33:82.15:0,82,1342	0/0:17,0:18:45.13:0,45,780	0/0:11,0:13:33.09:0,33,574	1/1:6,28:34:81.04:925,81,0	1/1:1,10:11:27.07:315,27,0	1/1:1,17:18:54.15:618,54,0	1/1:5,13:18:36.04:421,36,0	1/1:1,11:12:30.08:351,30,0	1/1:1,12:13:36.08:421,36,0	1/1:3,12:15:29.97:351,30,0	1/1:3,14:18:51.08:576,51,0	0/0:5,0:6:15.05:0,15,269	0/0:16,0:18:39.11:0,39,674	0/0:12,0:12:33.07:0,33,563	1/1:7,16:23:46.48:506,46,0	1/1:7,18:25:51.04:591,51,0	1/1:3,6:10:14.92:158,15,0	1/1:3,10:13:33.07:385,33,0	1/1:1,18:19:48.08:561,48,0	1/1:1,6:7:18.03:210,18,0	0/0:14,0:17:45.09:0,45,715	1/1:5,19:24:57.09:655,57,0	1/1:5,23:28:63.13:735,63,0	1/1:0,12:12:36.11:421,36,0
chr10	8623674	.	G	GT	4068.40	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-7.665;DP=469;FS=6.596;HRun=6;HaplotypeScore=52.9850;InbreedingCoeff=0.9900;MQ=76.89;MQ0=0;MQRankSum=-1.071;QD=32.55;ReadPosRankSum=2.411;VQSLOD=4.0355;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:60.14:0,60,612	0/0:6,0:6:15.03:0,15,153	0/0:8,0:8:15.03:0,15,153	0/0:13,0:13:33.07:0,33,335	0/0:24,0:24:66.13:0,66,666	0/0:18,0:18:54.12:0,54,550	0/0:11,0:11:33.08:0,33,337	0/0:25,0:25:54.12:0,54,551	0/0:13,0:13:30.06:0,30,306	1/1:4,25:29:81.21:978,81,0	1/1:3,21:24:60.15:736,60,0	0/0:11,0:11:27.06:0,27,275	0/0:10,0:10:27.06:0,27,275	0/0:15,0:15:39.08:0,39,398	1/1:1,17:18:48.15:604,48,0	0/0:9,0:9:27.06:0,27,275	0/0:17,0:17:51.11:0,51,519	0/0:18,0:18:36.07:0,36,367	0/0:22,0:22:63.08:0,63,619	0/0:21,0:21:57.13:0,57,581	0/0:7,0:7:18.04:0,18,184	1/1:4,23:27:69.18:844,69,0	1/1:2,18:20:51.16:641,51,0	1/1:0,7:7:21.07:264,21,0	0/0:15,0:15:42.10:0,42,429	0/0:25,0:25:63.13:0,63,638	0/0:25,0:25:69.14:0,69,696	0/0:10,0:10:27.06:0,27,275
chr10	8624725	.	C	CTG	695.77	PASS	AB=0.971;AC=15;AF=0.268;AN=56;BaseQRankSum=0.957;DP=449;FS=10.469;HRun=0;HaplotypeScore=75.0365;InbreedingCoeff=-0.3497;MQ=52.36;MQ0=15;MQRankSum=-0.253;QD=3.30;ReadPosRankSum=4.013;VQSLOD=0.4312;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:44:52.91:0,53,458	0/1:6,0:5:8.01:8,0,63	0/0:8,0:3:3:0,3,26	0/0:13,0:9:17.42:0,17,135	0/0:12,0:12:14.03:0,14,141	0/1:23,0:23:3.90:4,0,207	0/1:12,0:12:13.77:14,0,65	0/0:33,0:28:61.12:0,61,476	0/1:3,9:13:17.72:210,0,18	0/1:14,0:13:33.23:172,0,33	0/1:14,0:14:49:74,0,49	0/1:15,0:13:16.72:19,0,17	0/1:19,0:18:8.19:8,0,192	0/0:22,0:22:35.91:0,36,285	0/1:15,0:14:38.39:114,0,38	0/0:23,0:22:9.44:0,9,288	0/1:15,0:14:8.99:9,0,50	0/0:7,0:7:3.90:0,4,54	0/0:11,0:9:20.89:0,21,160	0/1:14,0:14:5.96:6,0,81	0/0:33,0:33:11.98:0,12,263	0/1:12,0:12:37.95:65,0,38	0/1:10,0:10:13.74:76,0,14	0/1:12,0:12:27.70:28,0,68	0/0:13,0:13:16.76:0,17,147	0/0:10,0:10:26.73:0,27,215	0/1:17,0:15:15.68:38,0,16	0/0:8,0:7:13.63:0,14,159
chr10	8624744	.	T	TCTCC	1477.43	PASS	AB=1.000;AC=26;AF=0.464;AN=56;BaseQRankSum=3.336;DP=422;FS=0.560;HRun=0;HaplotypeScore=89.0389;InbreedingCoeff=0.4484;MQ=55.39;MQ0=18;MQRankSum=-2.011;QD=5.20;ReadPosRankSum=-0.514;VQSLOD=1.9341;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:39,0:38:56.20:56,0,280	0/0:6,0:5:7.71:0,8,71	0/0:7,0:3:3.01:0,3,30	0/0:9,0:6:8.38:0,8,86	0/1:12,0:12:17.28:17,0,96	0/1:28,0:28:18.36:18,0,223	0/0:13,0:13:3.29:0,3,62	1/1:29,0:24:24.64:187,25,0	0/0:13,0:13:17.19:0,17,170	0/0:13,0:12:21.01:0,21,224	0/0:13,0:13:26.91:0,27,240	1/1:6,0:12:6.02:119,6,0	1/1:18,0:17:28.24:225,28,0	1/1:13,0:13:24.89:221,25,0	0/0:18,0:17:29.97:0,30,284	0/1:16,0:16:40.77:41,0,143	0/1:14,0:13:36.17:36,0,53	0/1:7,0:7:22.08:24,0,22	1/1:13,0:9:14.98:126,15,0	1/1:13,0:13:11.77:114,12,0	1/1:24,0:24:13.42:108,13,0	0/0:10,0:10:20.60:0,21,220	0/0:9,0:9:8.76:0,9,65	0/0:12,0:12:16.25:0,16,219	0/0:15,0:15:18.66:0,19,154	1/1:11,0:11:17.97:153,18,0	1/1:9,14:22:5.14:79,5,0	1/1:9,0:7:14.93:152,15,0
chr10	8625002	.	A	AT	6186.98	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-14.664;DP=519;FS=2.511;HRun=7;HaplotypeScore=46.7697;InbreedingCoeff=0.9905;MQ=74.76;MQ0=0;MQRankSum=-1.154;QD=30.03;ReadPosRankSum=-2.504;VQSLOD=4.3243;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:54.06:0,54,514	0/0:7,0:7:18.01:0,18,168	0/0:11,0:11:18.02:0,18,174	0/0:10,0:10:11.96:0,12,146	0/0:21,0:21:60.09:0,60,579	0/0:25,0:25:60.09:0,60,579	0/0:18,0:18:51.08:0,51,492	1/1:5,27:32:81.22:955,81,0	0/0:12,0:12:33.05:0,33,319	0/0:22,0:22:63.07:0,63,596	0/0:15,0:15:42.07:0,42,405	1/1:2,14:16:42.13:507,42,0	1/1:2,18:20:48.15:580,48,0	1/1:1,23:24:63.18:749,63,0	0/0:31,0:31:81.13:0,81,782	0/0:21,0:21:57.08:0,57,550	0/0:26,0:26:69.11:0,69,666	0/0:12,0:12:36.06:0,36,348	1/1:2,20:22:60.16:710,60,0	1/1:2,22:24:66.15:778,66,0	1/1:1,15:16:39.12:471,39,0	0/0:15,0:15:36.05:0,36,348	0/0:20,0:20:51.06:0,51,485	0/0:13,0:13:39.02:0,39,363	0/0:15,0:15:45.07:0,45,435	1/1:5,21:26:66.19:783,66,0	1/1:2,17:19:39.12:471,39,0	1/1:2,5:7:15.05:181,15,0
chr10	8627653	.	ACACACACG	A	1743.24	PASS	AB=0.678;AC=16;AF=0.286;AN=56;BaseQRankSum=5.311;DP=667;FS=20.003;HRun=0;HaplotypeScore=261.6647;InbreedingCoeff=0.7332;MQ=49.71;MQ0=8;MQRankSum=-3.591;QD=11.94;ReadPosRankSum=-1.716;VQSLOD=0.9871;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:87.30:0,87,2693	0/0:13,0:13:23.14:0,23,797	0/0:13,0:6:7.84:0,8,167	0/0:18,0:8:0.06:0,0,126	0/0:21,0:21:18.06:0,18,602	0/0:28,0:28:33.58:0,34,1000	0/0:39,0:39:69.06:0,69,1641	1/1:17,7:23:21.01:253,21,0	0/0:33,0:33:39.13:0,39,1340	0/0:33,0:30:69.23:0,69,2083	0/0:13,0:13:21.07:0,21,549	1/1:10,9:18:15:325,15,0	1/1:10,15:24:23.78:577,24,0	1/1:7,11:18:9.03:230,9,0	0/0:23,0:22:21.07:0,21,686	0/0:25,0:25:45.15:0,45,1486	0/0:28,0:28:66.22:0,66,2139	0/0:31,0:31:57.19:0,57,1846	1/1:7,2:6:2.98:76,3,0	0/1:5,6:11:0.01:0,0,0	0/0:22,18:38:0.47:0,0,1	0/0:17,0:17:21.07:0,21,668	0/0:25,0:25:27.09:0,27,683	0/0:44,0:44:72.03:0,72,2125	0/0:27,0:27:33.11:0,33,1207	0/1:10,7:17:99:161,0,162	1/1:15,2:17:9.91:145,10,0	1/1:4,2:6:6.02:153,6,0
chr10	8628227	.	ATG	A	3712.08	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-0.302;DP=882;FS=1.339;HRun=0;HaplotypeScore=261.1230;InbreedingCoeff=0.9806;MQ=56.54;MQ0=4;MQRankSum=-4.655;QD=19.13;ReadPosRankSum=-2.928;VQSLOD=3.0916;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,116,1811	0/0:12,0:12:33.10:0,33,533	0/0:43,0:31:80.99:0,81,1231	0/0:31,0:26:63.55:0,64,974	0/0:32,0:31:57.19:0,57,948	0/0:28,0:28:66.21:0,66,1090	0/0:29,0:29:59.91:0,60,921	0/0:50,1:51:99:0,99,2077	1/1:4,39:42:83.08:1057,83,0	1/1:12,16:28:78.24:983,78,0	1/1:4,19:23:18.03:234,18,0	0/0:48,0:48:99:0,111,1752	0/0:29,0:29:75.20:0,75,1209	0/0:34,0:34:96.31:0,96,1600	1/1:5,39:44:65.51:856,66,0	0/0:40,0:40:99:0,99,1561	0/0:24,0:24:57.01:0,57,856	0/0:18,0:18:45.09:0,45,712	0/0:29,0:27:72.18:0,72,1130	0/0:29,0:29:66.23:0,66,1110	0/0:53,0:53:99:0,143,2297	1/1:5,13:18:12:156,12,0	1/1:4,19:23:23.94:311,24,0	1/1:5,10:15:8.86:117,9,0	0/0:31,0:31:63.20:0,63,1032	0/0:33,2:34:24.45:0,24,1463	0/0:32,0:32:78.27:0,78,1317	0/0:8,0:8:24.08:0,24,408
chr10	8628347	.	ATG	A	9511.98	PASS	AB=0.947;AC=34;AF=0.607;AN=56;BaseQRankSum=6.357;DP=944;FS=17.887;HRun=0;HaplotypeScore=246.0083;InbreedingCoeff=0.8728;MQ=56.42;MQ0=13;MQRankSum=2.127;QD=16.49;ReadPosRankSum=4.529;VQSLOD=3.2916;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,30:42:90.11:1066,90,0	1/1:6,12:20:38.78:421,39,0	0/1:49,0:16:1.19:1,0,102	0/0:44,0:25:20.38:0,20,371	1/1:8,25:32:51.01:592,51,0	1/1:9,15:29:44.46:449,44,0	1/1:14,22:36:28.06:582,28,0	0/0:42,2:44:16.68:0,17,1075	1/1:11,19:30:39.19:449,39,0	1/1:13,20:33:18.40:682,18,0	1/1:8,19:28:42.12:501,42,0	0/0:42,2:44:63.16:0,63,1452	0/0:34,0:34:57.19:0,57,885	0/0:35,5:40:15.81:0,16,1171	1/1:10,36:46:66.12:787,66,0	1/1:9,31:43:80.91:922,81,0	1/1:11,17:29:53.95:619,54,0	1/1:5,9:14:32.42:345,32,0	0/0:30,0:27:14.75:0,15,649	0/0:35,2:36:48.50:0,48,1224	0/0:49,1:49:99:0,99,1551	1/1:3,14:17:36.11:429,36,0	1/1:5,17:22:42.03:500,42,0	1/1:10,24:34:33.10:394,33,0	1/1:2,24:27:63.02:729,63,0	0/1:36,5:42:44.59:45,0,1059	0/0:28,2:30:15.18:0,15,728	0/0:14,0:14:24.08:0,24,370
chr10	8628489	.	TG	T	5086.79	PASS	AB=0.976;AC=35;AF=0.625;AN=56;BaseQRankSum=0.212;DP=618;FS=2.617;HRun=2;HaplotypeScore=304.5469;InbreedingCoeff=-0.0762;MQ=43.54;MQ0=0;MQRankSum=-3.668;QD=8.73;ReadPosRankSum=-5.257;VQSLOD=0.3810;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:23:5.70:137,0,6	0/1:6,0:6:2.71:33,0,3	0/0:5,0:6:8.64:0,9,57	0/1:7,3:10:99:119,0,105	0/1:35,1:35:72.89:73,0,80	0/1:36,0:36:45.58:93,0,46	0/0:16,2:18:8.28:0,8,31	1/1:26,0:26:69.68:528,70,0	0/1:18,1:19:24.70:36,0,25	0/1:35,1:36:39.44:105,0,39	0/1:23,0:23:0.62:1,0,48	1/1:21,1:22:43.03:284,43,0	1/1:29,1:30:76.48:535,76,0	1/1:32,0:32:69.76:444,70,0	0/1:34,1:35:53.08:53,0,62	0/1:33,0:32:31.43:140,0,31	0/1:13,0:13:10.33:61,0,10	0/1:8,0:8:1.10:32,0,1	1/1:17,1:17:43.53:335,44,0	1/1:25,3:28:52.72:365,53,0	1/1:9,1:10:16.88:109,17,0	0/1:24,0:23:32.65:65,0,33	0/1:16,0:16:23.69:44,0,24	0/0:10,1:11:8.42:0,8,26	0/1:18,0:17:18.86:50,0,19	1/1:31,0:31:67.07:491,67,0	1/1:41,2:43:99:831,116,0	1/1:6,0:6:17.85:125,18,0
chr10	8628490	.	G	GT	23351.50	PASS	AB=0.798;AC=54;AF=0.964;AN=56;BaseQRankSum=-0.428;DP=594;FS=0.000;HRun=1;HaplotypeScore=232.0874;InbreedingCoeff=-0.0394;MQ=44.15;MQ0=0;MQRankSum=-4.200;QD=39.31;ReadPosRankSum=3.032;VQSLOD=4.1553;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,17:23:57.18:840,57,0	1/1:3,3:6:18.06:272,18,0	0/1:4,2:6:32.42:129,0,32	0/1:9,2:11:90.28:189,0,90	1/1:4,31:34:87.27:1262,87,0	1/1:5,30:35:99:1538,102,0	1/1:3,14:17:36.12:552,36,0	1/1:2,23:25:72.24:1099,72,0	1/1:3,15:18:51.17:785,51,0	1/1:6,30:36:99:1517,99,0	1/1:4,18:22:54.18:806,54,0	1/1:3,17:20:48.16:711,48,0	1/1:3,25:28:78.25:1148,78,0	1/1:1,25:26:75.23:1085,75,0	1/1:7,29:36:99:1495,99,0	1/1:9,24:32:93.31:1421,93,0	1/1:5,8:13:30.10:450,30,0	1/1:3,5:8:12.04:181,12,0	1/1:3,14:16:48.16:725,48,0	1/1:4,23:27:66.22:973,66,0	1/1:1,8:10:27.08:412,27,0	1/1:4,20:23:66.21:978,66,0	1/1:3,12:15:36.12:536,36,0	1/1:3,7:10:15.05:224,15,0	1/1:5,13:17:45.15:694,45,0	1/1:1,25:27:81.26:1235,81,0	1/1:6,35:41:99:1813,120,0	1/1:0,6:6:18.06:281,18,0
chr10	8629394	.	CACACACACACACACAT	C	4389.67	PASS	AB=0.976;AC=23;AF=0.411;AN=56;BaseQRankSum=4.780;DP=563;FS=0.467;HRun=0;HaplotypeScore=265.1919;InbreedingCoeff=0.4424;MQ=40.95;MQ0=11;MQRankSum=-7.082;QD=16.02;ReadPosRankSum=-5.962;VQSLOD=1.8454;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:32:3.32:3,0,1844	0/1:15,0:15:55.82:56,0,857	0/0:27,0:10:21.09:0,21,312	0/0:44,0:17:36.10:0,36,609	0/1:26,0:26:1.84:2,0,1123	0/0:12,0:11:11.19:0,11,928	0/0:24,0:24:29.32:0,29,1888	0/1:10,0:10:59.85:127,0,60	0/0:22,0:22:1.78:0,2,827	0/0:18,0:18:44.69:0,45,2280	0/0:15,0:15:11.29:0,11,477	1/1:15,3:17:26.69:353,27,0	1/1:12,7:19:40.61:739,41,0	1/1:6,5:11:24.01:338,24,0	0/0:28,0:27:2.91:0,3,1278	0/1:16,0:16:4.85:5,0,1129	0/0:14,0:13:23.85:0,24,903	0/0:11,0:10:22.25:0,22,790	1/1:7,1:8:11.94:298,12,0	1/1:9,28:37:54.11:730,54,0	1/1:23,0:23:14.22:81,14,0	0/0:27,0:27:6.81:0,7,959	0/0:14,0:14:11.64:0,12,604	0/0:33,0:33:14.12:0,14,851	0/1:16,0:16:9.52:10,0,1413	0/1:16,4:20:99:835,0,135	1/1:12,6:18:23.95:723,24,0	1/1:4,0:2:3.48:90,3,0
chr10	8629396	.	C	CACACACACACACAT	2623.04	PASS	AB=0.986;AC=18;AF=0.333;AN=54;BaseQRankSum=-3.371;DP=558;FS=10.180;HRun=0;HaplotypeScore=291.1000;InbreedingCoeff=0.3886;MQ=43.41;MQ0=9;MQRankSum=1.019;QD=10.29;ReadPosRankSum=1.792;VQSLOD=0.9783;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:34,0:33:17.59:18,0,93	0/0:15,0:15:11.98:0,12,133	0/0:27,0:12:17.96:0,18,171	0/0:41,0:17:29.56:0,30,307	0/0:26,0:26:10.72:0,11,133	0/0:14,0:13:8.43:0,8,48	0/0:23,0:23:21.32:0,21,179	0/0:10,0:10:14.92:0,15,136	0/1:19,1:21:3.01:316,0,3	1/1:10,8:18:29.61:767,30,0	1/1:14,1:15:1.93:200,2,0	0/0:18,0:17:11.65:0,12,100	0/0:18,0:18:20.44:0,20,343	0/1:11,0:11:0.25:0,0,15	1/1:25,2:28:13.63:857,14,0	0/1:15,0:15:13.69:24,0,14	0/0:13,0:12:17.55:0,18,123	0/0:11,0:10:0.07:0,0,110	0/0:9,0:9:9:0,9,217	./.	0/1:21,0:21:5.50:8,0,5	1/1:27,0:28:2.64:101,3,0	1/1:9,4:14:6.02:308,6,0	1/1:16,1:33:5.14:157,5,0	0/1:16,0:16:28.19:28,0,106	0/0:20,0:20:10.66:0,11,542	0/0:17,0:17:12.67:0,13,402	0/0:4,0:2:0:0,0,0
chr10	8629418	.	A	AATGATGATG	19195.62	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=4.160;DP=507;FS=28.093;HRun=0;HaplotypeScore=237.2521;InbreedingCoeff=0.8019;MQ=37.96;MQ0=5;MQRankSum=-3.010;QD=42.75;ReadPosRankSum=0.434;VQSLOD=3.2124;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:18,11:28:24.49:1184,24,0	1/1:9,5:14:18.06:794,18,0	0/0:25,0:17:21.06:0,21,469	0/0:33,0:19:30.10:0,30,706	1/1:18,3:21:20.22:671,20,0	1/1:6,10:15:36.12:1618,36,0	1/1:16,4:20:18.01:766,18,0	1/1:19,0:12:18.49:486,18,0	1/1:6,0:19:39.13:849,39,0	1/1:11,0:13:26.83:478,27,0	1/1:7,0:13:14.71:321,15,0	1/1:22,0:22:41.46:1490,41,0	1/1:22,0:24:27.95:884,28,0	1/1:18,0:17:21.07:787,21,0	1/1:10,0:22:32.60:689,33,0	1/1:10,6:19:33.11:1295,33,0	1/1:5,4:9:14.89:640,15,0	1/1:8,2:10:6.02:275,6,0	1/1:16,0:14:27.07:611,27,0	1/1:31,0:31:27.09:1028,27,0	1/1:17,0:17:11.14:464,11,0	1/1:6,0:16:29.74:638,30,0	1/1:6,0:8:5.99:147,6,0	1/1:18,0:21:8.11:145,8,0	1/1:9,5:14:20.57:827,21,0	1/1:17,0:18:36.12:1173,36,0	1/1:13,0:13:23.11:646,23,0	1/1:4,0:4:9.03:289,9,0
chr10	8629442	.	A	AAAG	4014.70	PASS	AB=0.941;AC=24;AF=0.429;AN=56;BaseQRankSum=2.029;DP=464;FS=13.818;HRun=0;HaplotypeScore=191.0952;InbreedingCoeff=0.5459;MQ=40.18;MQ0=10;MQRankSum=-7.084;QD=16.32;ReadPosRankSum=1.932;VQSLOD=2.7178;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:18,0:17:20.13:20,0,149	0/1:10,0:10:40.17:40,0,77	0/0:31,0:18:39.09:0,39,534	0/0:27,0:15:20.77:0,21,244	0/0:20,0:20:8.47:0,8,325	0/1:13,0:12:63.31:63,0,79	0/1:15,0:15:4.42:4,0,207	1/1:26,0:18:30.03:454,30,0	0/0:19,0:19:3.56:0,4,175	0/0:15,0:14:30.39:0,30,320	0/0:14,0:14:22.88:0,23,216	1/1:15,6:21:39.04:473,39,0	1/1:10,11:21:36.58:546,37,0	0/1:10,12:20:2.03:414,0,2	0/0:18,0:18:22.44:0,22,245	0/0:20,0:20:24.88:0,25,251	0/0:10,0:10:7.06:0,7,174	0/0:8,0:8:15.88:0,16,185	1/1:11,1:10:18.05:321,18,0	1/1:17,7:24:33.99:473,34,0	1/1:9,3:12:14.91:135,15,0	0/0:18,0:18:26.67:0,27,233	0/0:8,0:8:15.95:0,16,163	0/0:10,0:10:9.40:0,9,115	0/1:9,0:9:44.73:45,0,82	1/1:9,8:15:33.03:543,33,0	1/1:6,7:13:18.47:268,18,0	1/1:3,4:8:9.79:216,10,0
chr10	8629445	.	G	GATGATGATGATGATGATA	8741.56	PASS	AB=0.994;AC=21;AF=0.375;AN=56;BaseQRankSum=6.555;DP=466;FS=49.344;HRun=0;HaplotypeScore=267.5202;InbreedingCoeff=-0.2571;MQ=38.23;MQ0=10;MQRankSum=-6.259;QD=28.11;ReadPosRankSum=1.744;VQSLOD=2.3963;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:18,0:17:99:148,0,240	0/1:11,0:11:43.54:44,0,156	0/0:29,0:17:51.13:0,51,1100	0/0:24,0:12:33.11:0,33,945	0/1:20,0:20:94.74:95,0,586	0/1:14,0:12:59.38:59,0,126	0/1:15,0:15:23.52:24,0,395	0/1:26,0:18:99:316,0,248	0/1:20,0:20:18.47:18,0,576	0/0:14,0:13:39.08:0,39,861	0/0:14,0:14:18.31:0,18,402	1/1:21,2:22:6.20:2035,6,0	0/1:20,1:21:99:686,0,195	0/1:21,1:20:99:979,0,127	0/0:18,0:18:14.09:0,14,508	0/1:20,0:20:58.18:58,0,470	0/0:12,0:11:2.48:0,2,289	0/0:8,0:8:17.72:0,18,223	0/1:15,0:12:99:368,0,234	1/1:24,0:24:2.99:1344,3,0	1/1:12,0:12:8.02:799,8,0	0/0:18,0:18:42.96:0,43,543	0/0:8,0:8:17.89:0,18,318	0/0:10,0:10:0.27:0,0,211	0/1:9,0:9:77.87:78,0,177	0/1:17,0:15:99:802,0,288	0/1:13,0:13:99:619,0,132	0/1:8,0:8:99:268,0,125
chr10	8629457	.	G	GATA	1244.86	PASS	AB=0.958;AC=11;AF=0.196;AN=56;BaseQRankSum=5.345;DP=474;FS=55.622;HRun=0;HaplotypeScore=212.7487;InbreedingCoeff=0.1353;MQ=38.45;MQ0=19;MQRankSum=-4.786;QD=7.68;ReadPosRankSum=1.240;VQSLOD=1.0782;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:17:45.22:0,45,592	0/0:12,0:10:19.38:0,19,253	0/0:28,0:13:39.13:0,39,657	0/0:18,0:9:23.52:0,24,368	0/0:21,0:21:32.86:0,33,507	0/0:19,0:16:38.39:0,38,446	0/0:18,0:18:41.57:0,42,555	0/0:23,0:20:30.37:0,30,539	0/0:18,0:18:45.73:0,46,647	0/0:14,0:13:39.03:0,39,621	0/0:13,0:13:39.12:0,39,579	0/1:22,0:21:66.19:146,0,66	1/1:18,0:17:18.15:146,18,0	0/1:24,0:22:99:111,0,120	0/0:19,0:18:44.36:0,44,677	0/0:18,0:18:51.08:0,51,726	0/0:13,0:12:29.07:0,29,400	0/0:10,0:10:21.07:0,21,338	0/1:11,1:11:99:111,0,203	0/1:28,1:26:89.33:225,0,89	1/1:14,2:15:1.96:182,2,0	0/0:17,0:17:43.20:0,43,601	0/0:8,0:8:21.07:0,21,332	0/0:10,0:9:18.53:0,19,265	0/0:13,0:12:22.46:0,22,276	0/1:15,1:14:85.78:198,0,86	0/1:13,1:14:46.33:234,0,46	0/1:10,0:9:31.37:46,0,31
chr10	8629458	.	AAGG	A	1196.94	PASS	AB=0.940;AC=13;AF=0.232;AN=56;BaseQRankSum=3.440;DP=443;FS=31.154;HRun=0;HaplotypeScore=170.6332;InbreedingCoeff=0.1442;MQ=39.00;MQ0=20;MQRankSum=-5.398;QD=7.21;ReadPosRankSum=-1.232;VQSLOD=1.4794;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:17:28.16:0,28,460	0/0:12,0:10:19.33:0,19,225	0/0:28,0:13:39.09:0,39,754	0/0:17,0:9:19.36:0,19,271	0/0:20,0:20:15.81:0,16,597	0/0:19,0:16:31.49:0,31,381	0/0:18,0:18:40.07:0,40,588	0/1:18,4:19:94.41:94,0,273	0/0:18,0:18:28.40:0,28,650	0/0:15,0:13:36.07:0,36,659	0/0:13,0:13:35.87:0,36,447	0/1:13,3:16:1.51:260,0,2	1/1:14,0:13:22.60:171,23,0	0/1:21,1:20:80.33:185,0,80	0/0:18,0:17:44.57:0,45,601	0/0:18,0:18:42.40:0,42,661	0/0:13,0:12:4.76:0,5,349	0/1:10,0:10:1.59:2,0,329	0/1:12,1:11:79.41:79,0,203	0/1:18,1:16:66.55:227,0,67	1/1:13,1:13:15.15:114,15,0	0/0:17,0:17:37.99:0,38,499	0/0:8,0:8:21:0,21,313	0/0:10,0:9:15.39:0,15,244	0/0:13,0:12:4.53:0,5,273	0/1:14,1:13:99:112,0,153	0/1:11,0:11:21.54:89,0,22	0/1:10,0:9:22.43:22,0,135
chr10	8629510	.	A	ATT	4468.17	PASS	AB=0.904;AC=13;AF=0.232;AN=56;BaseQRankSum=9.243;DP=584;FS=7.119;HRun=0;HaplotypeScore=111.3515;InbreedingCoeff=0.3377;MQ=55.37;MQ0=19;MQRankSum=-7.881;QD=19.26;ReadPosRankSum=-1.225;VQSLOD=4.6131;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:20:18.06:0,18,265	0/0:4,0:4:6.02:0,6,83	0/0:9,0:7:21.07:0,21,332	0/0:18,0:12:15.53:0,16,320	0/0:19,0:16:33.06:0,33,437	0/0:14,0:14:21.07:0,21,319	0/0:19,0:18:27.04:0,27,379	0/1:12,16:30:99:619,0,263	0/0:29,0:28:36.08:0,36,496	0/0:23,0:21:62.93:0,63,906	0/0:26,0:26:45.14:0,45,667	1/1:21,0:22:35.38:323,35,0	0/1:17,1:19:5.05:256,0,5	0/1:17,0:17:15.36:185,0,15	0/0:17,0:16:15.02:0,15,208	0/0:28,0:27:58.40:0,58,743	0/0:17,0:16:42.71:0,43,559	0/0:17,0:17:44.09:0,44,607	0/1:26,0:25:99:496,0,173	1/1:25,0:24:10.52:609,11,0	1/1:17,0:17:27.83:309,28,0	0/0:25,0:24:40.33:0,40,597	0/0:18,0:17:36.10:0,36,518	0/0:22,0:21:35.85:0,36,601	0/0:22,0:22:39.13:0,39,587	0/1:33,0:32:99:752,0,188	0/1:25,1:27:4.83:790,0,5	0/1:12,0:12:99:129,0,143
chr10	8629916	.	A	AATGG	10165.91	PASS	AB=0.960;AC=15;AF=0.268;AN=56;BaseQRankSum=-14.643;DP=598;FS=1.170;HRun=0;HaplotypeScore=87.2426;InbreedingCoeff=0.9090;MQ=88.31;MQ0=0;MQRankSum=-3.771;QD=55.25;ReadPosRankSum=2.899;VQSLOD=6.0613;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:42.13:0,42,724	0/0:6,0:6:12.04:0,12,216	0/0:25,0:25:69.20:0,69,1129	0/0:19,0:19:45.15:0,45,796	0/0:26,0:26:66.23:0,66,1163	0/0:27,0:27:75.21:0,75,1237	0/0:12,0:12:33.11:0,33,587	0/0:35,0:35:81.27:0,81,1428	1/1:4,12:17:39.13:990,39,0	1/1:2,24:28:78.25:1883,78,0	1/1:4,28:33:90.31:2296,90,0	0/0:16,0:16:42.14:0,42,755	0/0:29,0:29:78.25:0,78,1372	0/0:23,0:23:57.19:0,57,1021	1/1:3,21:26:57.20:1479,57,0	0/0:16,0:16:48.16:0,48,863	0/0:18,0:18:48.16:0,48,851	0/0:9,0:9:27.07:0,27,440	0/0:21,0:21:60.20:0,60,1050	0/0:30,0:30:78.25:0,78,1373	0/0:15,0:15:42.14:0,42,755	1/1:1,19:20:51.18:1324,51,0	1/1:4,16:20:45.15:1169,45,0	1/1:1,15:16:39.13:1013,39,0	0/0:26,0:26:75.19:0,75,1313	0/1:23,1:24:11.76:12,0,1062	0/0:24,0:24:63.22:0,63,1126	0/0:22,0:22:63.17:0,63,1070
chr10	8631095	.	TGATGACGAC	T	12527.44	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=18.669;DP=853;FS=7.491;HRun=0;HaplotypeScore=257.5754;InbreedingCoeff=0.9732;MQ=63.62;MQ0=3;MQRankSum=-15.456;QD=41.48;ReadPosRankSum=1.244;VQSLOD=3.5317;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,114,4216	0/0:18,0:18:45.11:0,45,1686	0/0:36,0:32:42.11:0,42,1136	0/0:39,0:37:59.39:0,59,1604	0/0:22,0:22:45.12:0,45,1411	0/0:26,0:26:60.19:0,60,2423	0/0:42,0:42:99:0,102,3919	1/1:4,29:33:84.01:1330,84,0	0/0:38,0:38:99:0,99,3962	0/0:29,0:29:78.18:0,78,2487	0/0:18,0:18:33.11:0,33,1282	1/1:5,24:29:60.20:1538,60,0	1/1:4,30:35:72.25:1912,72,0	1/1:4,26:30:57.19:1462,57,0	0/0:41,0:41:99:0,108,4453	0/0:32,0:32:87.25:0,87,3390	0/0:28,0:28:75.23:0,75,3156	0/0:23,0:23:63.17:0,63,2435	1/1:13,22:34:66.08:1473,66,0	1/1:5,21:26:39.13:886,39,0	1/1:11,21:32:2.97:20,3,0	0/0:22,0:22:60.18:0,60,2239	0/0:30,0:30:60.21:0,60,2336	0/0:35,0:35:90.29:0,90,3877	0/0:29,0:29:69.17:0,69,2262	1/1:9,30:39:77.99:1994,78,0	1/1:5,29:34:54.18:1381,54,0	1/1:0,9:9:21.07:531,21,0
chr10	8633294	.	T	TAG	12048.22	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-15.905;DP=705;FS=3.973;HRun=0;HaplotypeScore=77.1844;InbreedingCoeff=0.9747;MQ=85.10;MQ0=1;MQRankSum=-8.899;QD=44.79;ReadPosRankSum=0.128;VQSLOD=6.2960;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:72.24:0,72,1007	0/0:12,0:12:36.12:0,36,504	0/0:33,0:33:93.31:0,93,1292	0/0:24,0:24:60.20:0,60,819	0/0:32,0:32:81.27:0,81,1133	0/0:28,0:28:84.27:0,84,1157	0/0:22,0:22:60.20:0,60,841	1/1:4,26:31:78.25:1370,78,0	0/0:23,0:23:63.20:0,63,865	0/0:29,0:29:78.25:0,78,1075	0/0:31,0:31:84.27:0,84,1153	1/1:1,30:31:84.29:1512,84,0	1/1:1,24:25:72.25:1293,72,0	1/1:1,25:26:63.22:1134,63,0	0/0:24,0:24:66.22:0,66,923	0/0:23,0:23:66.22:0,66,924	0/0:23,0:23:69.23:0,69,965	0/0:13,0:13:36.10:0,36,484	1/1:1,28:29:84.29:1496,84,0	1/1:3,24:28:57.20:1026,57,0	1/1:2,19:21:51.17:919,51,0	0/0:24,0:24:72.24:0,72,994	0/0:27,0:27:75.25:0,75,1051	0/0:12,0:12:36.12:0,36,504	0/0:28,0:28:72.24:0,72,1008	1/1:6,27:33:3.24:1361,3,0	1/1:2,24:28:69.24:1236,69,0	1/1:0,16:16:39.13:702,39,0
chr10	8633484	.	GCTCCC	G	8256.21	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=18.163;DP=602;FS=0.681;HRun=0;HaplotypeScore=173.5362;InbreedingCoeff=0.9962;MQ=79.18;MQ0=0;MQRankSum=-17.973;QD=46.65;ReadPosRankSum=3.067;VQSLOD=5.0232;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,114,3761	0/0:11,0:11:33.11:0,33,980	0/0:15,0:15:42.14:0,42,1240	0/0:27,0:27:81.28:0,81,2512	0/0:23,0:23:63.22:0,63,2034	0/0:25,0:25:72.23:0,72,2273	0/0:33,0:33:99:0,99,3144	1/1:2,20:22:66.20:1064,66,0	0/0:30,0:30:90.31:0,90,2993	0/0:12,0:12:36.12:0,36,1182	0/0:23,0:23:69.22:0,69,2200	1/1:0,19:19:57.20:972,57,0	1/1:2,18:20:60.20:991,60,0	1/1:0,21:21:63.22:1071,63,0	0/0:27,0:27:81.28:0,81,2699	0/0:28,0:28:84.29:0,84,2769	0/0:26,0:26:78.27:0,78,2567	0/0:10,0:10:27.09:0,27,870	1/1:1,5:6:18.05:288,18,0	1/1:1,25:26:72.25:1209,72,0	1/1:1,11:12:18.02:275,18,0	0/0:16,0:16:48.16:0,48,1577	0/0:32,0:32:96.31:0,96,3007	0/0:21,0:21:63.22:0,63,2049	0/0:28,0:28:81.28:0,81,2615	1/1:0,20:20:60.18:987,60,0	1/1:2,22:24:69.21:1118,69,0	1/1:2,5:7:18.03:281,18,0
chr10	8633490	.	GAGCCT	G	8057.67	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=18.715;DP=611;FS=0.688;HRun=0;HaplotypeScore=174.7031;InbreedingCoeff=0.9927;MQ=80.05;MQ0=0;MQRankSum=-17.933;QD=47.40;ReadPosRankSum=3.730;VQSLOD=5.1212;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,114,3743	0/0:11,0:11:33.11:0,33,1031	0/0:14,0:14:42.09:0,42,1154	0/0:27,0:27:81.28:0,81,2625	0/0:24,0:24:69.24:0,69,2216	0/0:26,0:26:72.25:0,72,2373	0/0:30,0:30:90.31:0,90,2985	1/1:0,20:20:60.20:1018,60,0	0/0:30,0:30:90.31:0,90,2997	0/0:15,0:15:45.15:0,45,1489	0/0:27,0:27:81.28:0,81,2599	1/1:0,19:19:57.20:972,57,0	1/1:2,19:21:63.20:1022,63,0	1/1:1,21:22:66.22:1099,66,0	0/0:32,0:32:96.33:0,96,3130	0/0:30,0:30:90.31:0,90,2892	0/0:27,0:27:81.28:0,81,2693	0/0:10,0:10:27.09:0,27,899	1/1:1,5:6:15.05:262,15,0	1/1:0,25:25:69.24:1168,69,0	1/1:0,11:11:15.05:255,15,0	0/0:17,0:17:48.15:0,48,1395	0/0:33,0:33:99:0,99,3048	0/0:21,0:21:63.19:0,63,2021	0/0:28,0:29:87.30:0,87,2705	1/1:1,17:19:56.98:934,57,0	1/1:0,22:22:63.22:1067,63,0	1/1:0,5:5:15.05:260,15,0
chr10	8633495	.	T	TGG	2760.12	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=18.451;DP=650;FS=1.783;HRun=1;HaplotypeScore=170.6342;InbreedingCoeff=0.9941;MQ=80.11;MQ0=0;MQRankSum=-18.311;QD=12.84;ReadPosRankSum=-0.138;VQSLOD=0.4639;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,102,1538	0/0:11,0:11:33.11:0,33,504	0/0:17,0:17:42.05:0,42,545	0/0:26,0:26:78.26:0,78,1149	0/0:24,0:24:66.22:0,66,1010	0/0:26,0:26:72.23:0,72,1080	0/0:30,0:30:87.28:0,87,1312	1/1:27,2:29:71.67:560,72,0	0/0:31,0:31:93.30:0,93,1399	0/0:15,0:15:45.15:0,45,671	0/0:26,0:26:75.25:0,75,1148	1/1:21,0:21:52.68:251,53,0	1/1:23,0:23:56.78:358,57,0	1/1:29,0:29:72.07:499,72,0	0/0:31,0:31:93.27:0,93,1360	0/0:32,0:32:93.29:0,93,1382	0/0:27,0:27:81.28:0,81,1240	0/0:11,0:11:30.10:0,30,459	1/1:9,0:9:18.84:121,19,0	1/1:33,2:35:67.26:354,67,0	1/1:15,0:15:19.73:113,20,0	0/0:14,0:14:39.13:0,39,597	0/0:31,0:31:93.26:0,93,1352	0/0:21,0:21:63.15:0,63,913	0/0:27,0:27:81.25:0,81,1198	1/1:23,0:23:56.88:373,57,0	1/1:26,0:26:60:306,60,0	1/1:5,0:5:12.68:45,13,0
chr10	8633735	.	TA	T	10141.25	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=17.333;DP=741;FS=14.582;HRun=1;HaplotypeScore=100.2462;InbreedingCoeff=0.9997;MQ=74.64;MQ0=0;MQRankSum=-11.519;QD=39.00;ReadPosRankSum=0.394;VQSLOD=3.3554;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:93.21:0,93,1405	0/0:15,0:15:45.15:0,45,716	0/0:21,0:22:63.17:0,63,956	0/0:21,0:20:54.18:0,54,829	0/0:34,0:34:99:0,102,1630	0/0:23,0:23:69.24:0,69,1100	0/0:28,0:28:84.27:0,84,1304	1/1:0,20:20:57.19:797,57,0	0/0:24,0:24:72.25:0,72,1151	0/0:36,0:36:99:0,108,1726	0/0:30,0:30:90.21:0,90,1348	1/1:0,30:30:90.23:1233,90,0	1/1:1,29:30:87.15:1147,87,0	1/1:1,25:26:75.13:983,75,0	0/0:39,0:39:99:0,117,1845	0/0:26,0:26:78.25:0,78,1222	0/0:23,0:23:63.20:0,63,973	0/0:18,0:18:48.12:0,48,738	1/1:1,24:25:75.25:1048,75,0	1/1:0,27:27:81.11:1062,81,0	1/1:4,21:25:62.92:815,63,0	0/0:21,0:21:63.20:0,63,982	0/0:40,0:40:99:0,120,1874	0/0:18,0:18:54.18:0,54,849	0/0:30,0:30:90.31:0,90,1439	1/1:2,33:35:57.35:1362,57,0	1/1:1,33:34:99:1360,99,0	1/1:1,7:8:24.08:335,24,0
chr10	8633777	.	GA	G	8041.62	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=12.531;DP=772;FS=6.943;HRun=5;HaplotypeScore=111.0251;InbreedingCoeff=0.9994;MQ=73.26;MQ0=1;MQRankSum=-7.567;QD=29.03;ReadPosRankSum=-1.582;VQSLOD=3.5350;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:31:74.56:0,75,981	0/0:14,0:14:42.14:0,42,574	0/0:25,0:23:43.99:0,44,624	0/0:23,0:22:35.73:0,36,482	0/0:29,0:29:81.26:0,81,1092	0/0:25,0:25:72.24:0,72,974	0/0:27,0:27:75.25:0,75,1025	1/1:0,29:29:87.24:978,87,0	0/0:30,0:30:87.26:0,87,1138	0/0:39,0:39:99:0,111,1518	0/0:26,0:26:78.25:0,78,1051	1/1:3,29:32:78.22:884,78,0	1/1:4,25:29:72.20:815,72,0	1/1:2,20:22:54.15:612,54,0	0/0:32,0:32:93.30:0,93,1258	0/0:29,0:29:84.28:0,84,1149	0/0:29,0:29:87.23:0,87,1151	0/0:27,0:27:78.26:0,78,1064	1/1:4,29:33:87.21:972,87,0	1/1:2,27:29:75.21:849,75,0	1/1:5,23:28:54.15:607,54,0	0/0:28,0:28:78.26:0,78,1067	0/0:35,0:35:93.31:0,93,1271	0/0:18,0:18:54.18:0,54,738	0/0:27,0:27:81.19:0,81,1068	1/1:4,35:39:99:1214,108,0	1/1:2,25:26:78.21:873,78,0	1/1:0,9:9:21.06:238,21,0
chr10	8634766	.	TA	T	3460.20	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=3.200;DP=387;FS=4.352;HRun=5;HaplotypeScore=85.9181;InbreedingCoeff=0.9811;MQ=69.56;MQ0=0;MQRankSum=-3.042;QD=26.02;ReadPosRankSum=-0.269;VQSLOD=3.0219;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:44.99:0,45,527	0/0:6,0:6:18.06:0,18,245	0/0:11,0:11:27.02:0,27,310	0/0:12,0:12:29.86:0,30,361	0/0:14,0:14:30.03:0,30,365	0/0:8,0:8:18.02:0,18,225	0/0:15,0:15:45.15:0,45,610	1/1:2,13:15:39.11:441,39,0	0/0:26,0:26:62.97:0,63,729	0/0:19,0:19:51.16:0,51,678	0/0:16,0:16:42.11:0,42,552	1/1:3,14:17:33.03:357,33,0	1/1:0,17:17:39.11:441,39,0	1/1:0,12:12:30.02:322,30,0	0/0:18,0:18:51.17:0,51,691	0/0:17,0:17:42.10:0,42,552	0/0:14,0:14:30.01:0,30,367	0/0:9,0:9:24.04:0,24,306	1/1:0,9:7:21.06:238,21,0	1/1:3,14:17:42.04:457,42,0	1/1:3,5:8:8.76:86,9,0	0/0:12,0:12:33.11:0,33,446	0/0:8,0:8:21.07:0,21,283	0/0:12,0:12:21.04:0,21,267	0/0:17,0:17:42.10:0,42,549	1/1:3,16:19:45.13:509,45,0	1/1:1,14:15:42.12:474,42,0	1/1:0,4:4:12.03:136,12,0
chr10	8635816	.	T	TA	16264.29	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-5.632;DP=606;FS=9.563;HRun=1;HaplotypeScore=84.8672;InbreedingCoeff=0.9970;MQ=76.67;MQ0=0;MQRankSum=-1.340;QD=41.38;ReadPosRankSum=2.565;VQSLOD=4.8732;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:42.14:0,42,544	0/0:12,0:12:36.12:0,36,466	0/0:14,0:14:39.10:0,39,467	0/0:9,0:9:22.60:0,23,258	0/0:42,0:42:99:0,120,1556	0/0:24,0:24:72.23:0,72,934	0/0:19,0:19:51.15:0,51,645	1/1:2,26:28:75.25:1124,75,0	1/1:1,9:10:27.09:405,27,0	1/1:0,30:30:87.26:1244,87,0	1/1:0,29:29:81.27:1202,81,0	1/1:0,15:15:39.13:584,39,0	1/1:0,24:24:72.24:1077,72,0	1/1:0,18:18:51.17:764,51,0	1/1:0,17:17:48.16:719,48,0	0/0:26,0:26:78.21:0,78,970	0/0:19,0:19:57.13:0,57,704	0/0:11,0:11:30.10:0,30,389	1/1:0,32:32:96.30:1390,96,0	1/1:0,29:29:84.24:1229,84,0	1/1:0,15:15:42.14:629,42,0	1/1:0,21:21:54.18:809,54,0	1/1:0,31:31:81.25:1214,81,0	1/1:0,6:6:15.05:225,15,0	0/0:23,0:23:66.19:0,66,829	1/1:0,30:30:90.29:1313,90,0	1/1:0,42:43:99:1749,118,0	1/1:1,14:15:39.13:585,39,0
chr10	8637384	.	GT	G	3790.43	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=11.307;DP=563;FS=2.729;HRun=7;HaplotypeScore=71.4816;InbreedingCoeff=0.9954;MQ=73.13;MQ0=0;MQRankSum=-3.320;QD=25.61;ReadPosRankSum=-3.236;VQSLOD=2.9131;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:1,11:12:33.07:336,33,0	1/1:0,5:5:15.03:153,15,0	0/0:26,0:26:66.18:0,66,795	0/0:22,0:22:50.27:0,50,622	1/1:5,23:28:69.15:703,69,0	1/1:1,21:22:54.12:550,54,0	1/1:3,17:20:54.12:550,54,0	0/0:31,0:31:87.24:0,87,1046	0/0:13,0:13:30.08:0,30,364	0/0:18,0:18:51.16:0,51,638	0/0:17,0:17:48.15:0,48,602	0/0:10,0:10:24.08:0,24,301	0/0:28,0:28:75.24:0,75,941	0/0:23,0:23:57.10:0,57,681	0/0:27,0:27:75.21:0,75,926	1/1:2,18:20:51.11:520,51,0	1/1:2,18:20:42.09:428,42,0	1/1:1,8:9:24.05:245,24,0	0/0:26,0:26:72.22:0,72,891	0/0:24,0:24:57.18:0,57,717	0/0:9,0:9:18.06:0,18,226	0/0:22,0:22:60.19:0,60,754	0/0:34,0:34:87.28:0,87,1091	0/0:15,0:15:39.12:0,39,491	1/1:2,10:12:30.07:306,30,0	0/0:22,0:22:60.18:0,60,742	0/0:30,0:30:87.22:0,87,1060	0/0:18,0:18:54.17:0,54,679
chr10	8637391	.	TC	T	910.75	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=15.421;DP=572;FS=3.244;HRun=1;HaplotypeScore=79.2143;InbreedingCoeff=0.7209;MQ=76.76;MQ0=0;MQRankSum=-4.641;QD=6.28;ReadPosRankSum=1.623;VQSLOD=0.7865;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,1:12:29.84:153,30,0	0/1:7,0:7:19.02:44,0,19	0/0:27,1:28:81.15:0,81,1048	0/0:20,0:20:59.30:0,59,723	1/1:25,0:25:20.60:206,21,0	1/1:22,0:22:25.04:170,25,0	1/1:20,1:21:2.44:153,2,0	0/0:36,0:36:99:0,102,1357	0/0:12,0:12:30.10:0,30,435	0/0:20,0:20:60.17:0,60,799	0/0:19,0:19:54.15:0,54,734	0/0:12,0:12:33.07:0,33,424	0/0:28,0:28:81.22:0,81,1118	0/0:22,0:22:57.19:0,57,814	0/0:28,0:28:84.18:0,84,1153	1/1:19,0:19:20.34:134,20,0	0/1:18,0:18:3.34:77,0,3	0/1:10,0:10:20.62:35,0,21	0/0:24,0:24:72.21:0,72,999	0/0:24,0:24:63.15:0,63,875	0/0:8,0:8:21.05:0,21,286	0/0:22,0:22:63.16:0,63,891	0/0:32,0:32:90.25:0,90,1277	0/0:14,0:14:39.13:0,39,568	1/1:10,1:11:25.47:126,25,0	0/0:23,0:23:63.18:0,63,870	0/0:34,0:34:93.09:0,93,1263	0/0:21,0:21:63.10:0,63,850
chr10	8637944	.	C	CACAGAAT	16780.95	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=8.516;DP=645;FS=16.988;HRun=0;HaplotypeScore=231.5180;InbreedingCoeff=0.9976;MQ=84.05;MQ0=0;MQRankSum=-18.226;QD=92.71;ReadPosRankSum=-1.961;VQSLOD=3.8282;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,21:33:90.31:3294,90,0	1/1:2,6:9:24.08:857,24,0	0/0:25,0:25:42.74:0,43,1534	0/0:23,0:22:60.20:0,60,1443	1/1:13,9:22:45.15:1481,45,0	1/1:12,16:28:69.24:2507,69,0	1/1:11,7:19:48.12:1678,48,0	0/0:28,0:28:81.28:0,81,2104	0/0:22,0:22:66.23:0,66,1779	0/0:37,0:37:99:0,105,2717	0/0:13,0:12:33.11:0,33,889	0/0:29,0:29:87.30:0,87,2245	0/0:26,0:26:72.25:0,72,1927	0/0:14,0:14:39.13:0,39,1040	0/0:25,0:25:72.25:0,72,1933	1/1:10,17:27:81.28:3009,81,0	1/1:9,5:15:36.12:1206,36,0	1/1:5,2:7:16.30:616,16,0	0/0:25,0:25:69.24:0,69,1784	0/0:19,0:19:57.20:0,57,1537	0/0:39,0:39:99:0,108,2698	0/0:11,0:11:30.09:0,30,754	0/0:23,0:23:66.23:0,66,1760	0/0:31,0:31:90.31:0,90,2404	1/1:7,14:21:60.21:2133,60,0	0/0:30,0:30:90.31:0,90,2312	0/0:29,0:29:87.30:0,87,2230	0/0:15,0:15:42.14:0,42,1112
chr10	8638157	.	G	GACAT	5666.45	PASS	AB=0.895;AC=27;AF=0.482;AN=56;BaseQRankSum=-6.557;DP=617;FS=4.583;HRun=0;HaplotypeScore=144.3107;InbreedingCoeff=0.4691;MQ=68.58;MQ0=0;MQRankSum=-0.332;QD=15.83;ReadPosRankSum=1.644;VQSLOD=4.6718;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:27:14.88:105,15,0	1/1:7,0:7:5.96:43,6,0	0/0:26,0:22:14.06:0,14,202	0/0:24,0:20:21.06:0,21,290	1/1:21,0:21:3:26,3,0	1/1:17,0:17:5.99:60,6,0	0/1:16,0:16:0:0,0,0	0/0:47,0:47:48.15:0,48,694	0/0:20,0:20:42.14:0,42,657	1/1:23,20:43:18.72:1348,19,0	1/1:13,13:27:33.11:779,33,0	0/0:16,0:16:24.08:0,24,380	0/0:18,0:19:45.15:0,45,688	0/0:16,0:16:30.08:0,30,445	1/1:9,21:31:10.51:1172,11,0	1/1:9,0:9:8.93:64,9,0	0/1:11,0:11:12.09:12,0,46	0/1:8,0:8:21.91:23,0,22	0/0:20,0:20:24.07:0,24,359	0/0:21,0:22:51.14:0,51,743	0/0:22,0:22:39.13:0,39,611	0/1:9,8:17:15.32:475,0,15	0/1:13,17:32:11.37:750,0,11	1/1:9,19:29:30.10:715,30,0	1/1:23,0:23:5.94:42,6,0	0/1:20,1:21:32.42:32,0,524	0/0:27,0:26:51.17:0,51,807	0/1:19,0:19:19.07:19,0,172
chr10	8638180	.	ATACATACATACT	A	4878.97	PASS	AB=0.639;AC=17;AF=0.304;AN=56;BaseQRankSum=9.869;DP=568;FS=1.470;HRun=0;HaplotypeScore=232.8792;InbreedingCoeff=0.9082;MQ=52.34;MQ0=2;MQRankSum=-10.363;QD=39.99;ReadPosRankSum=-6.098;VQSLOD=3.0903;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:10,6:23:21.75:893,0,22	1/1:1,3:6:15.05:410,15,0	0/0:25,0:17:51.06:0,51,999	0/0:26,0:19:54.13:0,54,1226	1/1:4,4:16:24:384,24,0	1/1:5,4:15:30.07:554,30,0	1/1:3,3:10:18.06:311,18,0	0/0:41,0:41:99:0,123,4033	0/0:24,0:24:51.27:0,51,2602	0/0:35,0:35:99:0,105,3409	0/0:23,0:22:51.60:0,52,2145	0/0:13,0:13:31.34:0,31,1542	0/0:22,0:22:62.15:0,62,2838	0/0:17,0:17:48.09:0,48,2114	0/0:32,0:32:72.04:0,72,3337	1/1:3,5:9:21.04:532,21,0	1/1:7,2:10:15.30:344,15,0	1/1:10,2:13:29.74:433,30,0	0/0:14,0:13:39.09:0,39,1642	0/0:21,0:21:60.20:0,60,3124	0/0:22,0:22:60.68:0,61,2898	0/0:14,0:14:36.11:0,36,1266	0/0:29,0:29:63.16:0,63,2643	0/0:27,0:27:38.98:0,39,1591	1/1:7,9:20:53.91:1018,54,0	0/0:22,0:22:66.21:0,66,2681	0/0:27,0:26:75.26:0,75,3795	0/0:12,0:12:30.77:0,31,1048
chr10	8638191	.	C	CA	733.39	PASS	AB=0.961;AC=17;AF=0.304;AN=56;BaseQRankSum=10.231;DP=529;FS=0.947;HRun=1;HaplotypeScore=144.8909;InbreedingCoeff=0.2122;MQ=52.18;MQ0=3;MQRankSum=0.812;QD=3.56;ReadPosRankSum=2.134;VQSLOD=0.3318;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:16,2:18:16.87:240,17,0	0/1:6,1:7:11.87:85,0,12	0/0:31,0:21:56.07:0,56,761	0/0:26,0:19:42.13:0,42,548	1/1:8,3:11:3:26,3,0	1/1:9,3:12:6.02:93,6,0	0/1:9,1:11:0:0,0,0	0/0:32,0:32:93.30:0,93,1272	0/0:24,1:25:43.64:0,44,624	0/1:23,0:23:93.41:130,0,93	0/1:18,0:17:6.72:7,0,142	0/0:13,0:13:33.58:0,34,462	0/0:22,0:22:63.18:0,63,856	0/0:15,0:15:42.12:0,42,569	0/1:30,0:30:16.82:17,0,207	1/1:10,1:11:9.03:141,9,0	0/1:9,1:10:32.41:32,0,50	0/0:13,0:13:9.06:0,9,159	0/0:15,0:14:41.17:0,41,551	0/0:23,0:23:63.17:0,63,844	0/0:24,0:24:57.02:0,57,796	0/1:11,0:11:24.08:24,0,63	0/0:27,0:27:1.67:0,2,295	0/1:24,0:25:20.36:20,0,100	0/1:18,1:19:19.76:82,0,20	0/0:20,0:20:55.22:0,55,791	0/0:25,0:24:69.23:0,69,963	0/0:11,0:11:23.07:0,23,329
chr10	8638208	.	TAC	T	1341.92	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=10.641;DP=519;FS=6.883;HRun=0;HaplotypeScore=153.0625;InbreedingCoeff=0.9723;MQ=48.17;MQ0=7;MQRankSum=-9.400;QD=9.52;ReadPosRankSum=0.356;VQSLOD=2.8903;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:23,5:28:21.79:153,22,0	1/1:5,3:8:8.38:70,8,0	0/0:28,0:15:42.06:0,42,677	0/0:22,0:13:36.12:0,36,567	1/1:6,4:10:9.02:92,9,0	1/1:12,4:15:18.24:164,18,0	1/1:16,4:19:14.97:149,15,0	0/0:24,0:24:72.08:0,72,1029	0/0:30,0:30:58.13:0,58,694	0/0:17,1:17:43.86:0,44,595	0/0:19,0:18:51.11:0,51,735	0/0:12,0:12:28.90:0,29,382	0/0:20,0:20:57.04:0,57,665	0/0:14,0:13:30.05:0,30,443	0/0:32,0:32:72:0,72,996	1/1:8,5:13:19.90:169,20,0	1/1:9,3:12:19.37:174,19,0	1/1:9,4:13:38.50:398,38,0	0/0:12,0:11:30.10:0,30,478	0/0:25,0:24:63.14:0,63,897	0/0:16,0:16:27.56:0,28,416	0/0:9,0:8:21.03:0,21,295	0/0:25,0:24:51:0,51,736	0/0:20,0:20:36.03:0,36,486	1/1:7,14:20:20.15:183,20,0	0/0:15,0:15:45.12:0,45,644	0/0:26,0:25:78.11:0,78,1005	0/0:11,0:11:32.76:0,33,392
chr10	8638210	.	CACCACACACACA	C	4639.28	PASS	AB=0.868;AC=18;AF=0.321;AN=56;BaseQRankSum=9.159;DP=516;FS=4.186;HRun=0;HaplotypeScore=216.2872;InbreedingCoeff=0.7723;MQ=48.15;MQ0=7;MQRankSum=-10.701;QD=26.82;ReadPosRankSum=0.242;VQSLOD=3.7758;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:11,16:28:23.28:362,23,0	1/1:4,5:9:8.56:248,9,0	0/0:26,0:14:42.06:0,42,676	0/0:21,0:12:36.12:0,36,568	1/1:4,7:11:9.03:259,9,0	1/1:5,4:15:20.80:564,21,0	1/1:8,12:19:15.05:545,15,0	0/0:24,0:24:72.19:0,72,1184	0/1:30,0:30:99:191,0,527	0/0:17,0:16:46.97:0,47,837	0/0:20,0:19:53.78:0,54,1117	0/0:13,0:13:30.10:0,30,604	0/0:19,0:19:57.17:0,57,1235	0/0:14,0:13:33.04:0,33,826	0/0:32,0:32:78.12:0,78,1734	1/1:5,7:13:23.82:699,24,0	1/1:5,5:11:19.09:501,19,0	0/1:9,2:14:48.20:703,0,48	0/0:12,0:11:30.10:0,30,727	0/0:25,0:24:63.20:0,63,1305	0/0:14,0:15:28.03:0,28,758	0/0:9,0:8:21.07:0,21,479	0/0:23,0:22:50.92:0,51,1385	0/0:20,0:20:36.12:0,36,827	1/1:16,5:20:20.79:567,21,0	0/0:16,0:16:48.15:0,48,1183	0/0:26,0:25:74.63:0,75,1527	0/0:11,0:11:0.29:0,0,552
chr10	8638212	.	CCACA	C	3397.60	PASS	AB=0.950;AC=46;AF=0.885;AN=52;BaseQRankSum=0.306;DP=517;FS=6.546;HRun=0;HaplotypeScore=159.4067;InbreedingCoeff=-0.0038;MQ=47.83;MQ0=9;MQRankSum=0.850;QD=7.45;ReadPosRankSum=0.682;VQSLOD=2.4118;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:29:8.28:49,8,0	1/1:9,0:9:5.76:55,6,0	./.	./.	1/1:11,0:11:2.49:6,2,0	1/1:17,0:16:9.87:95,10,0	1/1:18,0:19:13.10:93,13,0	0/1:23,0:23:10.36:10,0,47	1/1:14,0:31:21.02:194,21,0	1/1:15,1:15:5.90:66,6,0	1/1:16,3:18:11.55:172,12,0	1/1:8,4:13:1.64:129,2,0	1/1:11,5:18:2.88:308,3,0	1/1:14,1:14:8.88:113,9,0	1/1:21,8:30:29.99:416,30,0	1/1:13,0:13:13.80:113,14,0	1/1:11,0:11:12:108,12,0	0/1:13,0:14:10.73:101,0,11	0/1:11,1:11:15.96:40,0,16	1/1:19,2:23:12.02:146,12,0	0/0:14,0:15:0:0,0,1	1/1:8,3:10:6.46:94,6,0	1/1:21,3:23:10.90:231,11,0	0/1:17,3:21:9.56:125,0,10	1/1:21,0:20:13.27:77,13,0	1/1:10,6:16:6.09:135,6,0	1/1:18,6:24:32.28:391,32,0	1/1:7,1:11:12.02:130,12,0
chr10	8638215	.	CACA	C	337.19	PASS	AB=0.990;AC=17;AF=0.304;AN=56;BaseQRankSum=9.286;DP=514;FS=39.491;HRun=0;HaplotypeScore=159.9286;InbreedingCoeff=-0.0467;MQ=47.44;MQ0=12;MQRankSum=-2.960;QD=1.28;ReadPosRankSum=1.140;VQSLOD=1.4647;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:29:14.62:15,0,37	1/1:9,0:9:4.17:38,4,0	0/0:24,0:14:42.13:0,42,528	0/0:19,0:10:30.10:0,30,379	0/0:11,0:11:6.53:0,7,32	1/1:17,0:16:1.49:58,1,0	1/1:20,0:19:8.82:57,9,0	0/0:21,0:21:62.31:0,62,707	0/1:31,0:30:22.76:23,0,379	0/0:17,0:16:33.84:0,34,428	0/0:19,0:18:19.01:0,19,420	0/1:11,1:12:20.04:20,0,175	0/1:16,0:16:30.97:31,0,217	0/0:14,1:15:8.02:0,8,283	0/1:28,1:29:31:31,0,428	0/1:14,0:13:14.02:65,0,14	0/1:13,0:12:56.98:58,0,57	0/1:17,0:16:48.49:48,0,175	0/0:13,0:12:20.27:0,20,309	0/0:25,0:24:33.06:0,33,605	0/0:15,0:15:26.91:0,27,342	0/0:11,0:10:4.63:0,5,158	0/0:23,0:22:15.63:0,16,368	0/0:18,1:20:8.13:0,8,233	0/1:21,0:20:23.78:30,0,24	0/0:16,0:16:23.61:0,24,439	0/1:24,0:23:7.20:7,0,455	0/1:11,0:11:16.10:16,0,199
chr10	8639878	.	AGAG	A	6916.19	PASS	AB=0.981;AC=34;AF=0.607;AN=56;BaseQRankSum=16.402;DP=599;FS=1.655;HRun=0;HaplotypeScore=149.7849;InbreedingCoeff=0.8285;MQ=66.03;MQ0=4;MQRankSum=-5.829;QD=18.59;ReadPosRankSum=1.558;VQSLOD=4.8471;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,29:33:57.19:819,57,0	1/1:2,6:8:15.05:207,15,0	0/1:18,0:11:18.19:18,0,179	0/1:24,1:18:25.78:26,0,161	1/1:6,24:29:72.11:965,72,0	1/1:2,15:17:39.13:553,39,0	1/1:5,11:16:18.04:251,18,0	0/0:22,0:21:33.93:0,34,521	1/1:4,0:28:47.61:335,48,0	1/1:0,0:18:45.53:318,46,0	1/1:4,0:24:50.61:330,51,0	0/0:15,0:15:33.09:0,33,563	0/0:21,0:21:57.14:0,57,1036	0/0:22,0:22:60.19:0,60,1170	1/1:0,0:18:47.59:333,48,0	1/1:1,19:20:45.15:632,45,0	1/1:5,24:29:54.18:769,54,0	1/1:7,13:20:5.04:319,5,0	0/0:24,0:23:48.12:0,48,830	0/0:31,0:30:72.22:0,72,1357	0/0:13,0:13:33.97:0,34,592	1/1:1,0:10:17.94:101,18,0	1/1:4,0:19:33.40:222,33,0	1/1:2,0:16:17.31:112,17,0	1/1:5,17:22:44.18:605,44,0	0/0:34,0:34:93.20:0,93,1720	0/0:29,0:29:83.41:0,83,1519	0/0:16,0:16:45.10:0,45,806
chr10	8639880	.	AG	A	407.56	PASS	AB=0.986;AC=18;AF=0.321;AN=56;BaseQRankSum=17.494;DP=597;FS=5.239;HRun=2;HaplotypeScore=150.9170;InbreedingCoeff=-0.0068;MQ=65.95;MQ0=4;MQRankSum=-5.381;QD=1.35;ReadPosRankSum=4.537;VQSLOD=-0.4565;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:31,0:31:10.47:10,0,28	1/1:7,0:7:4.26:13,4,0	0/0:20,0:12:18.41:0,18,282	0/0:24,0:18:17.51:0,18,337	0/1:30,0:29:12.11:12,0,196	0/1:16,0:16:20.39:20,0,28	0/1:16,0:16:6.16:6,0,143	0/0:23,0:22:55.02:0,55,740	0/1:27,0:27:45.96:46,0,84	0/1:18,0:18:56.50:56,0,60	0/1:23,1:24:69.94:70,0,95	0/0:14,0:14:39.13:0,39,575	0/0:21,0:21:63.21:0,63,932	0/0:22,0:22:66.22:0,66,976	1/1:18,0:18:28.27:89,28,0	0/1:20,0:20:10.74:36,0,11	0/1:27,1:28:35.42:35,0,98	0/0:20,0:20:10.80:0,11,199	0/0:24,0:23:66.18:0,66,925	0/0:31,0:30:90.30:0,90,1318	0/0:13,0:13:39.13:0,39,576	1/1:9,1:10:5.84:75,6,0	0/1:19,1:19:58.27:58,0,75	0/1:15,0:15:6.30:6,0,52	0/1:21,1:22:39.82:40,0,72	0/0:35,0:35:99:0,105,1533	0/0:31,0:31:93.28:0,93,1346	0/0:16,0:16:45.15:0,45,674
chr10	8640239	.	GAC	G	9170.70	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-4.451;DP=795;FS=1.636;HRun=0;HaplotypeScore=154.2864;InbreedingCoeff=0.9998;MQ=85.02;MQ0=0;MQRankSum=-6.834;QD=39.02;ReadPosRankSum=4.520;VQSLOD=6.2601;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,52:52:99:2021,141,0	1/1:0,9:9:27.09:387,27,0	0/0:23,0:23:69.24:0,69,1242	0/0:27,0:27:71.69:0,72,1194	1/1:1,39:40:99:1561,111,0	1/1:2,26:28:75.25:1075,75,0	1/1:0,22:22:54.18:774,54,0	0/0:34,0:33:93.32:0,93,1696	0/0:33,0:33:93.32:0,93,1704	0/0:32,0:32:90.28:0,90,1582	0/0:23,0:23:60.21:0,60,1099	0/0:28,0:28:84.29:0,84,1526	0/0:31,0:31:93.30:0,93,1665	0/0:29,0:29:84.29:0,84,1540	0/0:34,0:34:99:0,99,1747	1/1:0,27:27:81.27:1161,81,0	1/1:0,25:25:69.23:989,69,0	1/1:0,12:12:33.11:473,33,0	0/0:23,0:23:63.22:0,63,1155	0/0:32,0:32:87.28:0,87,1558	0/0:37,0:37:99:0,111,2004	0/0:26,0:26:75.26:0,75,1373	0/0:25,0:25:72.25:0,72,1319	0/0:32,0:32:90.31:0,90,1649	1/1:1,19:20:51.17:731,51,0	0/0:29,0:29:84.29:0,84,1537	0/0:42,0:42:99:0,126,2290	0/0:20,0:20:57.20:0,57,1045
chr10	8640686	.	GTC	G	3228.29	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=10.158;DP=869;FS=10.221;HRun=0;HaplotypeScore=208.9044;InbreedingCoeff=0.9891;MQ=58.25;MQ0=8;MQRankSum=-0.177;QD=21.67;ReadPosRankSum=1.372;VQSLOD=2.8932;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:62.48:0,62,998	0/0:11,0:11:21.04:0,21,323	0/0:50,0:38:98.02:0,98,1360	0/0:46,0:37:79.51:0,80,1337	0/0:27,0:27:51.61:0,52,864	0/0:21,0:21:12.92:0,13,183	0/0:26,0:26:51.12:0,51,896	0/0:39,0:39:99:0,108,1733	1/1:1,23:24:40.07:559,40,0	1/1:2,19:20:57.11:766,57,0	1/1:1,13:14:12.51:173,13,0	0/0:34,0:34:50.81:0,51,770	0/0:37,0:37:49.86:0,50,768	0/0:37,0:37:65.49:0,65,1081	1/1:4,27:29:42.14:599,42,0	0/0:38,0:38:60.15:0,60,1053	0/0:38,0:38:99:0,102,1798	0/0:13,0:13:33.04:0,33,565	0/0:30,0:30:78.18:0,78,1201	0/0:31,0:31:84.27:0,84,1501	0/0:71,0:71:99:0,154,2492	1/1:1,20:21:37.53:516,38,0	1/1:2,13:15:24.55:343,25,0	1/1:2,21:23:32.79:470,33,0	0/0:35,0:36:80.44:0,80,1562	0/0:24,0:24:65.99:0,66,1047	0/0:36,0:36:72:0,72,1281	0/0:32,0:32:90.29:0,90,1613
chr10	8640730	.	A	ATG	1202.21	PASS	AB=0.967;AC=17;AF=0.315;AN=54;BaseQRankSum=2.571;DP=751;FS=16.974;HRun=0;HaplotypeScore=219.8823;InbreedingCoeff=0.5952;MQ=48.18;MQ0=13;MQRankSum=-0.015;QD=5.14;ReadPosRankSum=-1.443;VQSLOD=1.5783;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:25:12.93:175,13,0	1/1:3,6:10:3.01:37,3,0	0/0:33,0:16:9.01:0,9,93	0/0:37,0:28:16.53:0,17,225	0/1:24,3:25:2.84:243,0,3	./.	1/1:12,11:23:6.02:74,6,0	0/0:38,0:35:16.16:0,16,460	0/0:24,0:24:0.35:0,0,27	0/1:18,0:18:15.90:17,0,16	0/0:7,0:7:6.83:0,7,24	0/0:32,0:32:11.75:0,12,129	0/0:29,0:29:17.51:0,18,198	0/0:37,0:37:26.41:0,26,262	0/0:24,0:22:10.80:0,11,37	1/1:15,21:36:2.88:16,3,0	1/1:31,0:31:32.61:510,33,0	1/1:14,0:14:18.89:160,19,0	0/0:25,0:22:10.24:0,10,211	0/0:30,0:30:39.12:0,39,432	0/0:60,0:60:67.16:0,67,703	0/0:24,0:24:6.75:0,7,24	0/0:11,0:10:0.89:0,1,2	0/1:19,0:20:2.98:3,0,14	1/1:29,1:30:9.03:138,9,0	0/0:32,0:31:62.52:0,63,561	0/0:31,0:30:49.10:0,49,540	0/0:24,0:23:35.98:0,36,380
chr10	8642035	.	T	TAC	1932.91	PASS	AB=1.000;AC=37;AF=0.712;AN=52;BaseQRankSum=3.053;DP=575;FS=3.806;HRun=0;HaplotypeScore=137.9497;InbreedingCoeff=0.6578;MQ=58.60;MQ0=11;MQRankSum=-5.189;QD=5.28;ReadPosRankSum=-0.477;VQSLOD=2.8677;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:19:3.09:24,3,0	1/1:6,0:6:3:26,3,0	./.	./.	1/1:30,0:30:16.35:130,16,0	1/1:17,0:17:2.71:26,3,0	1/1:13,0:14:6.49:72,6,0	1/1:29,0:29:12.75:82,13,0	0/0:28,0:28:30.04:0,30,308	0/0:30,0:30:19.95:0,20,500	0/0:25,0:25:24.49:0,24,242	1/1:20,2:22:8.98:115,9,0	1/1:21,1:23:26.80:270,27,0	1/1:32,0:33:21.41:184,21,0	0/0:23,0:23:42.09:0,42,457	1/1:24,0:24:1.07:100,1,0	1/1:10,0:10:15.28:102,15,0	1/1:9,0:9:0.94:2,1,0	1/1:13,0:13:14.98:142,15,0	1/1:24,2:26:11.51:117,12,0	1/1:15,0:14:2.37:22,2,0	0/0:19,0:20:41.92:0,42,429	0/0:15,0:15:6.02:0,6,68	0/0:14,0:14:21.14:0,21,262	1/1:17,0:17:12.59:132,13,0	0/1:26,0:26:9.80:193,0,10	1/1:25,2:27:30.83:326,31,0	1/1:6,0:6:5.98:48,6,0
chr10	8642069	.	C	CACACACAT	11706.88	PASS	AB=0.997;AC=45;AF=0.804;AN=56;BaseQRankSum=-0.197;DP=691;FS=19.172;HRun=0;HaplotypeScore=237.4944;InbreedingCoeff=0.1054;MQ=50.99;MQ0=10;MQRankSum=-1.683;QD=18.49;ReadPosRankSum=-3.709;VQSLOD=2.0316;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:17:17.14:154,17,0	1/1:4,0:7:14.94:124,15,0	0/0:26,0:3:2.80:0,3,13	0/0:32,0:9:11.91:0,12,131	1/1:22,0:33:54.29:527,54,0	1/1:16,0:19:16.64:142,17,0	1/1:13,0:15:19.35:218,19,0	1/1:29,0:29:80.88:823,81,0	0/1:28,0:28:99:102,0,220	0/1:43,0:44:99:472,0,529	0/1:24,0:24:99:165,0,252	1/1:18,6:25:36.81:614,37,0	1/1:30,5:37:89.89:1233,90,0	1/1:29,5:37:51.34:747,51,0	0/1:24,0:24:99:142,0,542	1/1:29,0:32:40:547,40,0	1/1:16,0:17:38.79:331,39,0	1/1:7,0:8:0.45:128,0,0	1/1:17,1:18:29.10:594,29,0	1/1:23,6:30:35.68:500,36,0	1/1:22,0:20:26.40:215,26,0	0/1:26,0:26:99:132,0,421	0/1:20,0:20:59.45:248,0,59	0/1:21,0:20:99:173,0,262	1/1:16,0:25:41.05:518,41,0	1/1:37,1:39:48.83:1181,49,0	1/1:22,5:28:75.02:1450,75,0	1/1:7,0:8:17.85:228,18,0
chr10	8642094	.	A	ATG	19343.46	PASS	AB=0.581;AC=51;AF=0.911;AN=56;BaseQRankSum=-1.044;DP=680;FS=24.750;HRun=0;HaplotypeScore=151.0739;InbreedingCoeff=0.7142;MQ=55.29;MQ0=3;MQRankSum=3.108;QD=30.85;ReadPosRankSum=4.349;VQSLOD=4.1911;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,10:14:17.85:289,18,0	1/1:2,6:8:12.04:204,12,0	0/0:29,0:14:26.84:0,27,291	0/0:23,0:11:12.26:0,12,125	1/1:10,28:38:57.09:930,57,0	1/1:2,13:15:20.89:356,21,0	1/1:2,13:15:6.87:292,7,0	1/1:10,25:36:45.30:1201,45,0	1/1:3,29:34:51.17:866,51,0	1/1:5,27:32:83.02:1252,83,0	1/1:5,20:25:45.15:761,45,0	1/1:6,16:23:30.10:507,30,0	1/1:5,28:35:84.07:1384,84,0	1/1:8,30:39:58.14:971,58,0	1/1:12,16:28:69.18:998,69,0	1/1:4,25:29:57.01:968,57,0	1/1:3,11:14:22.06:459,22,0	1/1:0,7:7:15.05:239,15,0	1/1:7,15:22:46.71:730,47,0	1/1:7,22:29:44.96:760,45,0	0/1:7,17:25:35.35:564,0,35	1/1:4,25:29:66.23:1107,66,0	1/1:4,24:28:60.21:1018,60,0	1/1:8,13:20:36.12:590,36,0	1/1:6,14:21:33.10:535,33,0	1/1:6,29:35:69.21:1371,69,0	1/1:2,13:17:39.11:663,39,0	1/1:1,7:8:21.04:327,21,0
chr10	8645360	.	AGAAG	A	1797.58	PASS	AB=0.969;AC=13;AF=0.232;AN=56;BaseQRankSum=8.080;DP=566;FS=46.933;HRun=0;HaplotypeScore=104.0926;InbreedingCoeff=0.5236;MQ=77.04;MQ0=4;MQRankSum=-1.251;QD=9.66;ReadPosRankSum=0.380;VQSLOD=1.1121;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:20.92:0,21,350	0/0:5,0:5:12.02:0,12,235	0/0:38,0:24:50.65:0,51,802	0/1:25,0:13:9.65:10,0,119	0/0:31,0:31:46.63:0,47,1146	0/0:15,0:15:21.07:0,21,345	0/1:13,0:13:30.65:31,0,442	0/0:20,0:20:51:0,51,584	0/1:18,0:18:24.73:42,0,25	1/1:22,0:22:36.04:351,36,0	0/1:13,1:14:2.43:155,0,2	0/0:19,0:19:50.98:0,51,548	0/0:19,0:19:42.05:0,42,524	0/0:30,0:30:62.23:0,62,794	1/1:32,4:36:59.79:649,60,0	0/0:13,0:13:11.86:0,12,474	0/0:17,0:17:18.06:0,18,269	0/0:20,0:20:32.98:0,33,497	0/0:22,0:22:59.96:0,60,812	0/0:24,0:24:62.97:0,63,848	0/0:6,0:6:15.03:0,15,204	0/1:18,1:19:6.09:170,0,6	1/1:22,0:22:24.65:317,25,0	1/1:15,1:16:19.29:247,19,0	0/0:22,0:22:0.02:0,0,357	0/0:27,0:26:66.12:0,66,899	0/0:25,0:25:72.05:0,72,859	0/0:14,0:14:35.55:0,36,393
chr10	8645364	.	GGAAA	G	3210.10	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=3.345;DP=561;FS=14.262;HRun=0;HaplotypeScore=100.3749;InbreedingCoeff=0.8007;MQ=77.43;MQ0=5;MQRankSum=0.165;QD=22.29;ReadPosRankSum=1.471;VQSLOD=2.5290;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:24.92:0,25,383	0/0:4,0:4:12.04:0,12,277	0/0:41,0:26:57.37:0,57,814	0/0:26,0:13:0.43:0,0,155	0/0:29,0:29:66.25:0,66,1355	0/0:16,0:16:21.05:0,21,367	0/0:13,0:13:17.07:0,17,494	0/0:18,0:18:49.90:0,50,555	1/1:1,0:15:1.20:84,1,0	1/1:0,16:18:51.56:666,52,0	1/1:3,2:12:29.60:263,30,0	0/0:16,0:17:50.47:0,50,531	0/0:18,0:18:41.99:0,42,486	0/0:27,0:28:59.29:0,59,902	1/1:5,21:31:55:883,55,0	0/0:14,0:15:2.84:0,3,409	0/0:22,0:22:18.84:0,19,228	0/0:21,0:21:32.96:0,33,458	0/0:24,0:24:60.36:0,60,796	0/0:22,0:22:65.94:0,66,802	0/0:7,0:7:17.84:0,18,248	1/1:13,5:18:36.85:477,37,0	1/1:11,7:20:55.77:667,56,0	1/1:1,15:17:20.72:351,21,0	0/0:23,0:23:24.50:0,25,423	0/0:28,0:27:77.95:0,78,883	0/0:27,0:27:71.78:0,72,900	0/1:13,0:13:7.17:7,0,306
chr10	8645365	.	GAA	G	1406.04	PASS	AB=0.826;AC=25;AF=0.446;AN=56;BaseQRankSum=1.153;DP=587;FS=2.919;HRun=18;HaplotypeScore=91.1408;InbreedingCoeff=0.2762;MQ=74.20;MQ0=5;MQRankSum=0.985;QD=4.12;ReadPosRankSum=5.620;VQSLOD=-0.6747;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:22:22.23:0,22,182	0/0:5,0:5:10.83:0,11,97	0/0:41,0:25:11.82:0,12,204	0/0:24,0:11:4.25:0,4,74	0/0:11,0:30:60.65:0,61,523	0/0:5,0:20:9.02:0,9,92	0/0:13,0:14:25.22:0,25,228	1/1:8,9:18:19.83:173,20,0	0/1:16,0:16:20.82:28,0,21	0/1:18,0:18:11.55:56,0,12	0/1:13,0:13:13.21:28,0,13	1/1:9,5:17:22.69:157,23,0	1/1:8,9:19:10.87:113,11,0	0/1:12,16:28:13.08:203,0,13	1/1:32,0:32:31.55:154,32,0	0/0:11,0:16:6.16:0,6,159	0/0:8,0:24:6.01:0,6,57	0/0:13,0:24:18.47:0,18,184	0/1:16,5:24:22.26:94,0,22	0/1:14,7:23:28.09:28,0,52	0/1:4,0:7:0.96:1,0,41	0/1:17,0:17:18.16:18,0,32	1/1:19,0:19:5.63:66,6,0	1/1:20,0:20:15.24:69,15,0	0/0:10,0:23:17.88:0,18,163	1/1:12,13:27:16.34:156,16,0	0/1:12,13:29:29.66:160,0,30	1/1:8,3:13:2.93:90,3,0
chr10	8645768	.	TGC	T	5719.47	PASS	AB=0.900;AC=45;AF=0.833;AN=54;BaseQRankSum=1.306;DP=478;FS=12.531;HRun=0;HaplotypeScore=78.9390;InbreedingCoeff=0.2850;MQ=66.78;MQ0=11;MQRankSum=-4.025;QD=13.92;ReadPosRankSum=1.848;VQSLOD=3.7107;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:31,1:33:80.72:694,81,0	1/1:6,0:6:14.96:153,15,0	0/0:23,0:16:35.04:0,35,324	0/0:25,0:16:28.16:0,28,298	1/1:15,0:15:19.65:205,20,0	./.	1/1:19,1:20:47.95:461,48,0	1/1:14,0:13:33.88:299,34,0	1/1:16,0:16:15:131,15,0	0/1:17,0:16:30.85:234,0,31	0/1:10,0:10:48.38:101,0,48	1/1:19,0:18:14.98:126,15,0	1/1:15,0:15:9:77,9,0	1/1:14,0:13:9:77,9,0	1/1:1,9:10:4.83:49,5,0	0/1:1,10:11:4.19:159,0,4	1/1:18,5:23:30.03:356,30,0	1/1:3,23:25:24.06:317,24,0	1/1:10,0:10:23.51:175,24,0	1/1:21,0:21:11.97:97,12,0	1/1:28,0:26:47.81:373,48,0	0/1:11,0:11:11.49:143,0,11	1/1:9,0:9:15.42:120,15,0	0/1:38,1:39:99:440,0,103	1/1:8,0:8:18.01:184,18,0	1/1:20,0:20:54.54:461,55,0	1/1:12,0:11:32.88:260,33,0	1/1:4,0:4:3:26,3,0
chr10	8645769	.	GCGCACA	G	4871.71	PASS	AB=0.935;AC=33;AF=0.611;AN=54;BaseQRankSum=-2.463;DP=473;FS=16.306;HRun=0;HaplotypeScore=105.0166;InbreedingCoeff=-0.0506;MQ=66.92;MQ0=11;MQRankSum=-2.126;QD=12.65;ReadPosRankSum=0.690;VQSLOD=2.9428;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:32:21.48:409,0,21	0/1:6,0:6:35.78:53,0,36	0/0:23,0:16:35.04:0,35,324	0/0:25,0:16:28.16:0,28,298	0/1:14,0:14:99:130,0,115	./.	0/1:19,0:20:95.01:198,0,95	1/1:14,0:13:33.88:299,34,0	1/1:1,0:16:14.78:270,15,0	0/1:16,0:15:99:127,0,362	0/1:10,0:11:95.61:96,0,322	1/1:2,15:18:14.94:340,15,0	1/1:0,14:15:9.03:198,9,0	1/1:2,11:12:9.03:216,9,0	0/0:10,0:10:6.01:0,6,91	0/0:11,0:11:14.98:0,15,179	0/1:7,1:22:76.23:76,0,139	0/1:25,0:25:5.94:6,0,136	1/1:0,9:9:26.52:246,27,0	1/1:0,21:21:12.04:275,12,0	1/1:27,0:25:47.84:394,48,0	0/1:11,0:11:99:121,0,119	0/1:10,0:10:99:108,0,179	0/1:39,0:39:99:349,0,864	0/1:6,1:8:38.99:70,0,39	0/1:18,1:20:9.59:504,0,10	1/1:9,0:10:32.90:316,33,0	1/1:0,4:4:3.01:73,3,0
chr10	8646286	.	T	TGCGCGC	469.10	PASS	AB=0.922;AC=15;AF=0.326;AN=46;BaseQRankSum=2.328;DP=339;FS=17.720;HRun=0;HaplotypeScore=139.4652;InbreedingCoeff=0.4223;MQ=46.67;MQ0=4;MQRankSum=-5.612;QD=3.85;ReadPosRankSum=-4.786;VQSLOD=-0.4437;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:12,0:11:0.89:2,1,0	1/1:5,0:5:0.89:2,1,0	0/0:12,0:10:30.05:0,30,577	0/0:14,0:11:27.09:0,27,581	0/0:25,0:25:5.89:0,6,24	0/0:12,0:12:0.94:0,1,2	0/0:12,0:12:21.54:0,22,445	0/0:19,0:18:39.11:0,39,763	1/1:3,4:7:1.50:3,2,0	0/1:9,4:13:99:502,0,220	1/1:9,7:16:4.43:9,4,0	./.	0/0:7,0:7:2.16:0,2,51	./.	./.	0/1:13,0:13:5.56:6,0,50	0/0:2,0:2:5.98:0,6,76	0/0:5,0:5:9.03:0,9,183	0/0:12,0:11:30.09:0,30,511	0/1:28,0:28:2.34:21,0,2	./.	1/1:8,3:11:2.66:5,3,0	1/1:14,3:17:11.89:42,12,0	./.	0/0:32,0:32:3.08:0,3,25	0/0:14,0:14:36.12:0,36,619	0/0:17,0:17:30.10:0,30,556	0/0:11,0:11:20.60:0,21,369
chr10	8646380	.	TG	T	7280.35	PASS	AC=50;AF=1.000;AN=50;DP=198;FS=0.000;HRun=1;HaplotypeScore=145.6845;InbreedingCoeff=-0.0324;MQ=34.01;MQ0=0;QD=37.14;VQSLOD=4.3804;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,9:9:21.07:286,21,0	1/1:0,6:6:18.06:251,18,0	./.	./.	1/1:0,13:13:27.03:376,27,0	1/1:0,7:7:18.06:251,18,0	1/1:0,3:3:9.03:126,9,0	1/1:0,2:2:6.02:84,6,0	1/1:0,8:8:24.08:335,24,0	1/1:0,8:8:24.08:335,24,0	1/1:0,12:12:33.11:460,33,0	1/1:0,8:8:24.08:335,24,0	1/1:0,5:5:15.05:209,15,0	1/1:0,4:4:12.04:167,12,0	1/1:0,10:10:24.08:335,24,0	1/1:0,7:7:21.07:293,21,0	1/1:0,6:6:15.05:202,15,0	1/1:0,1:1:3.01:42,3,0	1/1:0,2:2:6.02:84,6,0	1/1:0,22:22:57.19:769,57,0	1/1:0,1:1:3.01:42,3,0	1/1:0,17:17:48.14:636,48,0	1/1:0,16:16:39.13:544,39,0	./.	1/1:0,11:11:30.10:419,30,0	1/1:0,9:8:24.08:335,24,0	1/1:0,7:7:21.07:281,21,0	1/1:0,2:2:6.02:84,6,0
chr10	8646395	.	AT	A	7595.53	PASS	AC=52;AF=0.963;AN=54;DP=225;FS=0.000;HRun=2;HaplotypeScore=178.8909;InbreedingCoeff=0.2680;MQ=37.37;MQ0=0;QD=34.06;VQSLOD=4.1996;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,9:10:27.09:350,27,0	1/1:2,4:6:12.04:155,12,0	./.	0/0:2,0:2:0:0,0,0	1/1:0,16:16:35.98:446,36,0	1/1:0,8:8:24.08:311,24,0	1/1:0,4:4:8.99:98,9,0	1/1:1,4:5:12.04:156,12,0	1/1:1,10:10:27.09:350,27,0	1/1:0,10:10:30.10:389,30,0	1/1:0,11:11:27.09:350,27,0	1/1:0,9:9:27.09:350,27,0	1/1:0,5:5:15.05:194,15,0	1/1:0,6:6:18.06:232,18,0	1/1:1,9:10:24.08:311,24,0	1/1:0,12:12:33.11:427,33,0	1/1:0,6:6:18.06:233,18,0	1/1:0,1:1:3.01:39,3,0	1/1:0,4:4:12.04:155,12,0	1/1:0,19:19:51.12:641,51,0	1/1:0,4:4:11.95:117,12,0	1/1:0,13:13:39.13:505,39,0	1/1:0,19:19:54.13:679,54,0	1/1:0,2:2:3.01:39,3,0	1/1:0,13:13:36.03:428,36,0	1/1:0,10:9:27.09:350,27,0	1/1:0,6:6:15.05:194,15,0	1/1:0,3:3:8.99:98,9,0
chr10	8646405	.	TC	T	7259.99	PASS	AC=50;AF=0.926;AN=54;BaseQRankSum=1.070;DP=230;FS=8.325;HRun=4;HaplotypeScore=190.1462;InbreedingCoeff=0.5486;MQ=40.76;MQ0=0;MQRankSum=-1.732;QD=31.98;ReadPosRankSum=1.715;VQSLOD=2.3288;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,10:10:27.08:323,27,0	1/1:1,3:4:9.03:108,9,0	0/0:1,0:1:2.84:0,3,14	0/0:2,0:2:0:0,0,0	1/1:1,18:19:42.01:497,42,0	1/1:0,8:8:24.07:287,24,0	1/1:0,4:4:12.04:144,12,0	1/1:0,5:5:15.05:180,15,0	1/1:2,8:9:21.02:235,21,0	1/1:0,13:13:39.11:459,39,0	1/1:3,8:11:24.07:287,24,0	1/1:0,8:8:24.07:287,24,0	1/1:0,5:5:15.05:180,15,0	1/1:0,6:6:18.06:215,18,0	1/1:0,9:9:27.08:323,27,0	1/1:0,11:11:30.09:359,30,0	1/1:0,6:6:18.06:216,18,0	./.	1/1:1,3:4:9.03:108,9,0	1/1:1,19:20:54.17:646,54,0	1/1:0,5:5:15.05:179,15,0	1/1:1,13:14:39.12:466,39,0	1/1:2,16:18:48.15:574,48,0	1/1:0,3:3:5.69:71,6,0	1/1:1,13:14:39.12:466,39,0	1/1:2,8:9:24.07:288,24,0	1/1:0,7:7:21.06:251,21,0	1/1:0,3:3:9.03:108,9,0
chr10	8647346	.	AC	A	605.34	PASS	AC=30;AF=0.882;AN=34;BaseQRankSum=-3.207;DP=133;FS=7.091;HRun=1;HaplotypeScore=34.2866;InbreedingCoeff=0.1867;MQ=111.13;MQ0=7;MQRankSum=-0.150;QD=24.21;ReadPosRankSum=-0.482;VQSLOD=2.8426;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,1:1:3.01:41,3,0	./.	0/0:38,2:20:3.40:0,3,132	0/0:62,3:20:9.69:0,10,165	1/1:0,2:2:3.01:41,3,0	1/1:0,1:1:3.01:41,3,0	1/1:0,1:1:3.01:41,3,0	1/1:0,3:3:9.03:114,9,0	./.	1/1:0,3:3:6.02:83,6,0	1/1:0,1:1:3.01:41,3,0	./.	./.	./.	./.	./.	1/1:0,2:2:2.34:40,2,0	1/1:0,4:4:2.93:41,3,0	1/1:1,0:1:3.01:41,3,0	1/1:1,1:2:2.99:24,3,0	./.	./.	1/1:0,1:1:3.01:41,3,0	./.	1/1:0,1:1:3.01:30,3,0	1/1:0,1:1:3.01:41,3,0	1/1:0,1:1:3.01:41,3,0	./.
chr10	8647376	.	TC	T	75.63	PASS	AC=4;AF=0.40;AN=10;BaseQRankSum=-1.440;DP=117;FS=6.560;HRun=1;HaplotypeScore=63.5433;MQ=115.90;MQ0=10;MQRankSum=-1.285;QD=15.13;ReadPosRankSum=0.117;VQSLOD=2.9832;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:41,0:17:17.18:0,17,165	0/0:67,0:19:15.91:0,16,129	./.	./.	./.	1/1:0,1:1:3.01:42,3,0	./.	./.	./.	./.	./.	./.	./.	./.	0/0:0,1:1:0.89:0,1,2	1/1:0,4:4:9.03:112,9,0	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.
chr10	8649728	.	C	CTAG	49.89	PASS	AB=0.955;AC=5;AF=0.096;AN=52;BaseQRankSum=6.273;DP=822;FS=17.097;HRun=0;HaplotypeScore=183.2623;InbreedingCoeff=0.0254;MQ=37.94;MQ0=69;MQRankSum=-4.939;QD=0.54;ReadPosRankSum=1.423;VQSLOD=2.0266;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:24:17.96:0,18,281	0/0:22,0:17:19.38:0,19,265	0/0:41,0:11:27.02:0,27,378	0/0:48,0:16:32.79:0,33,424	0/0:13,0:9:6.02:0,6,82	0/0:31,0:26:18.06:0,18,298	0/0:107,2:100:99:0,140,2834	0/0:25,0:21:54.09:0,54,848	0/0:9,0:5:6.02:0,6,91	0/0:9,0:4:9.03:0,9,151	./.	0/1:55,1:52:24.27:24,0,958	0/0:35,0:32:54.39:0,54,946	0/0:32,1:29:14.78:0,15,778	1/1:4,0:4:1.14:3,1,0	0/0:56,3:55:14.62:0,15,1657	0/0:43,1:41:66.55:0,67,1200	0/0:23,0:21:0.64:0,1,687	0/0:10,0:7:15.05:0,15,261	0/0:5,0:5:3:0,3,25	0/0:90,0:70:81.95:0,82,1371	./.	0/0:4,0:3:3.01:0,3,53	0/0:19,0:13:5.53:0,6,27	0/0:27,0:17:12.04:0,12,195	0/0:28,0:18:43.39:0,43,704	0/1:18,1:16:29.34:29,0,441	0/1:13,1:13:92.65:93,0,367
chr10	8649994	.	C	CCTG	2840.01	PASS	AB=1.000;AC=10;AF=0.192;AN=52;BaseQRankSum=-4.214;DP=802;FS=1.135;HRun=0;HaplotypeScore=137.2603;InbreedingCoeff=0.7465;MQ=51.25;MQ0=29;MQRankSum=-0.028;QD=18.44;ReadPosRankSum=2.955;VQSLOD=3.4189;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:21:18:0,18,220	0/0:11,0:9:24.02:0,24,314	0/1:46,0:12:5.81:6,0,166	0/0:46,0:20:21.25:0,21,326	0/0:11,0:6:6.02:0,6,93	0/0:22,0:20:39.12:0,39,565	0/0:91,0:88:99:0,216,3006	0/0:17,0:14:29.67:0,30,402	1/1:4,14:19:27.09:566,27,0	1/1:2,2:4:3.01:64,3,0	./.	0/0:35,0:34:78.19:0,78,1133	0/0:30,0:30:75.23:0,75,1107	0/0:42,0:42:99:0,108,1603	1/1:2,20:21:30.10:641,30,0	0/0:63,0:63:99:0,132,1939	0/0:53,0:52:99:0,111,1883	0/0:57,0:56:99:0,144,2152	0/0:16,0:6:15.01:0,15,195	0/0:3,0:3:6.02:0,6,91	0/0:58,0:55:86.07:0,86,1125	0/1:2,0:1:0:0,0,0	./.	1/1:33,25:55:87.02:1711,87,0	0/0:18,0:9:8.82:0,9,104	0/0:12,0:10:18.05:0,18,258	0/0:21,0:20:54.09:0,54,721	0/0:13,0:12:27.08:0,27,392
chr10	8650081	.	GCTA	G	876.17	PASS	AB=0.911;AC=8;AF=0.154;AN=52;BaseQRankSum=6.654;DP=611;FS=9.612;HRun=0;HaplotypeScore=130.1705;InbreedingCoeff=0.3997;MQ=51.06;MQ0=36;MQRankSum=-2.129;QD=9.74;ReadPosRankSum=-2.913;VQSLOD=2.2755;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:6:2.92:0,3,17	1/1:7,0:3:3:25,3,0	0/0:45,0:15:32.25:0,32,649	0/0:58,0:20:39.92:0,40,687	./.	0/0:2,0:1:3.01:0,3,34	0/1:25,0:21:22.25:60,0,22	0/0:14,0:10:10.07:0,10,413	0/0:40,0:38:86.95:0,87,1798	0/0:15,0:12:32.97:0,33,471	0/0:3,0:2:6.01:0,6,67	0/0:44,0:42:99:0,102,2179	0/0:26,0:25:50.79:0,51,903	0/0:41,0:41:45.12:0,45,947	0/0:32,0:32:63.19:0,63,1330	1/1:6,5:11:17.32:253,17,0	1/1:17,7:24:2.91:349,3,0	0/1:18,5:23:99:319,0,124	0/0:10,0:9:24.06:0,24,429	0/0:9,0:7:15.04:0,15,282	0/0:62,0:49:99:0,115,2126	0/0:5,0:3:6.02:0,6,113	0/0:1,0:1:3.01:0,3,68	0/0:61,0:60:99:0,132,2938	./.	0/0:16,0:14:39.12:0,39,749	0/0:18,0:18:45.61:0,46,1011	0/0:3,0:3:3.01:0,3,69
chr10	8650108	.	ACTC	A	144.31	PASS	AB=0.900;AC=5;AF=0.100;AN=50;BaseQRankSum=6.655;DP=612;FS=0.797;HRun=0;HaplotypeScore=122.4571;InbreedingCoeff=0.2068;MQ=46.25;MQ0=53;MQRankSum=-2.955;QD=1.31;ReadPosRankSum=0.567;VQSLOD=2.0701;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:7:0:0,0,0	./.	0/0:46,0:15:30.70:0,31,360	0/0:52,0:8:4.04:0,4,149	./.	./.	1/1:10,1:10:9.06:77,9,0	0/0:17,0:8:11.50:0,12,363	0/0:33,0:30:55.53:0,56,777	0/0:24,0:17:37.87:0,38,491	0/0:7,0:5:9.03:0,9,196	0/0:32,0:30:61.61:0,62,1031	0/0:28,1:27:23.82:0,24,470	0/0:46,0:45:33.11:0,33,721	0/0:23,0:23:22.40:0,22,583	0/0:5,0:4:2.94:0,3,18	0/1:18,5:21:69.64:70,0,298	0/1:15,1:16:99:100,0,213	0/0:24,0:11:24.82:0,25,281	0/0:11,0:9:17.24:0,17,238	0/0:70,0:49:84.03:0,84,1513	0/0:15,0:12:6.02:0,6,137	0/0:7,0:6:12.04:0,12,253	0/1:56,4:59:6.95:7,0,1513	0/0:4,0:1:2.92:0,3,17	0/0:19,0:11:30.92:0,31,296	0/0:12,0:12:7.08:0,7,225	0/0:5,0:5:4.67:0,5,59
chr10	8650111	.	CCTGCTGCTA	C	4754.54	PASS	AB=0.566;AC=25;AF=0.568;AN=44;BaseQRankSum=-6.990;DP=594;FS=24.509;HRun=0;HaplotypeScore=133.7239;InbreedingCoeff=0.6955;MQ=44.81;MQ0=55;MQRankSum=7.282;QD=12.92;ReadPosRankSum=6.340;VQSLOD=1.5488;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:7:0:0,0,0	./.	0/0:44,0:15:17.47:0,17,168	0/0:54,0:7:8.51:0,9,97	./.	./.	0/0:10,0:9:8.36:0,8,45	./.	1/1:32,0:29:51:1023,51,0	1/1:14,9:16:13.24:201,13,0	1/1:7,0:5:2.74:12,3,0	1/1:30,0:28:26.88:451,27,0	1/1:11,17:26:2.97:46,3,0	0/1:11,36:46:0:0,0,0	1/1:21,0:21:39.02:814,39,0	0/0:6,0:5:6.02:0,6,71	0/0:22,0:21:11.17:0,11,345	0/0:18,0:17:27.01:0,27,487	1/1:19,4:10:11.13:161,11,0	./.	1/1:66,0:45:33.01:489,33,0	./.	0/0:7,0:6:1.25:0,1,3	1/1:58,1:57:34.64:1185,35,0	0/0:5,0:1:0:0,0,0	1/1:16,3:11:5.98:69,6,0	1/1:8,0:8:9.03:191,9,0	1/1:5,0:5:6.02:112,6,0
chr10	8650185	.	T	TG	3076.85	PASS	AB=0.922;AC=11;AF=0.212;AN=52;BaseQRankSum=-5.171;DP=702;FS=0.972;HRun=0;HaplotypeScore=136.0747;InbreedingCoeff=0.7941;MQ=57.48;MQ0=5;MQRankSum=2.223;QD=19.72;ReadPosRankSum=5.111;VQSLOD=5.3168;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:42.61:0,43,586	0/0:18,0:18:39.07:0,39,500	0/0:30,0:22:57.16:0,57,746	0/0:37,0:32:84.14:0,84,1057	0/0:10,0:10:12.03:0,12,151	0/0:16,0:16:18.03:0,18,251	0/0:95,1:95:99:0,229,3164	0/0:18,0:17:47.65:0,48,655	1/1:0,19:19:33.11:527,33,0	1/1:0,3:2:6.02:96,6,0	./.	0/0:28,1:29:60.17:0,60,803	0/0:25,0:24:51.14:0,51,676	0/0:32,0:32:60.18:0,60,817	1/1:1,29:30:54.12:850,54,0	0/0:37,1:36:76.48:0,76,1033	0/1:43,4:46:13.71:14,0,1291	0/0:47,1:48:82.04:0,82,1630	0/0:10,0:10:30.10:0,30,416	0/0:4,0:4:12.04:0,12,167	0/0:56,1:55:99:0,138,1873	1/1:0,2:2:3.01:48,3,0	./.	1/1:4,51:55:99:1705,111,0	0/0:9,0:7:9.03:0,9,126	0/0:13,0:13:36.12:0,36,503	0/0:11,0:11:30.09:0,30,403	0/0:7,0:7:21.07:0,21,294
chr10	8650341	.	G	GCTGCTGCTA	8893.62	PASS	AB=1.000;AC=47;AF=0.870;AN=54;BaseQRankSum=-2.237;DP=743;FS=2.528;HRun=0;HaplotypeScore=194.6416;InbreedingCoeff=0.5669;MQ=52.67;MQ0=9;MQRankSum=-3.634;QD=13.50;ReadPosRankSum=3.971;VQSLOD=3.9754;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:36,0:32:15.51:213,16,0	1/1:9,0:8:8.99:131,9,0	0/0:31,0:25:12.43:0,12,218	0/0:41,0:30:13.17:0,13,197	0/0:7,0:5:2.99:0,3,25	1/1:25,0:21:9.02:118,9,0	1/1:74,0:71:42.95:906,43,0	1/1:28,0:27:22.85:324,23,0	1/1:31,0:31:30.10:1063,30,0	1/1:18,0:17:9.01:131,9,0	0/1:7,0:6:0:0,0,0	1/1:11,21:36:18:760,18,0	1/1:10,15:26:6.02:243,6,0	1/1:12,17:33:18.06:781,18,0	1/1:33,0:33:24.07:842,24,0	1/1:28,4:32:49.56:1303,50,0	1/1:17,10:30:13.45:425,13,0	1/1:12,12:26:15.47:397,15,0	1/1:16,0:15:8.08:86,8,0	1/1:7,0:6:2.94:18,3,0	1/1:71,0:69:23.67:409,24,0	1/1:8,0:7:3:25,3,0	1/1:16,0:16:3:25,3,0	1/1:39,0:39:9.03:249,9,0	1/1:19,0:16:2.55:24,3,0	1/1:24,0:24:14.99:272,15,0	1/1:13,0:13:6.02:150,6,0	./.
chr10	8650350	.	A	ACTGCTGCTA	9090.66	PASS	AC=46;AF=0.852;AN=54;BaseQRankSum=-2.466;DP=723;FS=2.544;HRun=0;HaplotypeScore=200.6299;InbreedingCoeff=0.5814;MQ=53.29;MQ0=8;MQRankSum=-4.172;QD=14.25;ReadPosRankSum=3.954;VQSLOD=3.8103;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:42,0:38:15.92:213,16,0	1/1:11,0:10:8.99:131,9,0	0/0:26,0:22:12.43:0,12,218	0/0:39,0:30:13.17:0,13,197	0/0:6,0:6:2.94:0,3,25	1/1:25,0:20:9.02:118,9,0	1/1:70,0:67:42.95:906,43,0	1/1:26,0:25:22.85:287,23,0	1/1:26,0:26:30.10:1063,30,0	1/1:20,0:19:9.01:131,9,0	0/0:7,0:6:0:0,0,0	1/1:36,0:36:18:760,18,0	1/1:25,0:25:6.02:243,6,0	1/1:35,0:35:18.06:781,18,0	1/1:29,0:29:24.07:842,24,0	1/1:30,0:30:49.56:1303,50,0	1/1:28,0:27:16.46:561,16,0	1/1:24,0:24:15.47:397,15,0	1/1:16,0:15:8.08:86,8,0	1/1:7,0:7:2.94:18,3,0	1/1:66,0:64:27.20:464,27,0	1/1:9,0:8:3.88:27,4,0	1/1:14,0:14:3:25,3,0	1/1:39,0:39:9.03:249,9,0	1/1:22,0:18:2.55:25,3,0	1/1:23,0:23:14.99:272,15,0	1/1:8,5:14:9.03:188,9,0	./.
chr10	8650360	.	C	CTGCTGCTAT	7892.64	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=-2.621;DP=750;FS=1.902;HRun=0;HaplotypeScore=214.4903;InbreedingCoeff=-0.0831;MQ=57.88;MQ0=8;MQRankSum=-8.323;QD=12.22;ReadPosRankSum=10.034;VQSLOD=2.3169;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:48,0:45:55.46:55,0,212	0/1:11,0:11:54.91:55,0,100	0/0:20,0:18:35.12:0,35,536	0/0:36,0:30:22.30:0,22,552	0/0:11,0:11:11.98:0,12,115	0/1:26,0:21:15.54:16,0,162	0/1:63,0:60:99:447,0,314	0/1:27,0:26:65.54:66,0,295	1/1:3,22:28:30.10:1244,30,0	1/1:24,0:22:50.96:566,51,0	1/1:11,0:10:5.96:45,6,0	0/1:35,0:35:90.95:618,0,91	0/1:28,0:28:99:176,0,151	0/1:37,0:37:99:632,0,195	1/1:4,27:34:27.08:1066,27,0	0/1:27,0:27:21.35:956,0,21	0/1:28,0:27:11.97:623,0,12	0/1:25,0:25:81.13:388,0,81	0/1:11,0:10:0.75:1,0,124	0/0:10,0:10:14.01:0,14,103	0/1:71,0:69:99:160,0,234	1/1:10,0:9:14.93:141,15,0	1/1:13,0:13:17.88:160,18,0	1/1:8,33:48:5.89:252,6,0	0/0:24,0:20:14.02:0,14,118	0/1:23,0:23:99:138,0,197	0/1:18,0:17:87.97:88,0,175	0/0:3,0:3:8.97:0,9,70
chr10	8650697	.	C	CA	2873.88	PASS	AB=0.734;AC=18;AF=0.321;AN=56;BaseQRankSum=-11.147;DP=586;FS=1.899;HRun=12;HaplotypeScore=75.9358;InbreedingCoeff=0.7890;MQ=74.55;MQ0=0;MQRankSum=-0.482;QD=13.88;ReadPosRankSum=0.967;VQSLOD=4.2453;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:9,36:47:12.98:577,13,0	1/1:1,7:9:17.86:160,18,0	0/0:13,0:11:6.31:0,6,56	0/0:14,0:15:4.18:0,4,13	1/1:5,15:19:30.37:261,30,0	1/1:1,16:17:39.06:379,39,0	1/1:3,12:16:7.98:226,8,0	0/0:17,0:33:30.73:0,31,101	0/0:22,0:25:51.69:0,52,362	0/0:28,0:28:40.11:0,40,433	0/1:14,2:16:25.52:26,0,164	0/0:2,0:17:25.39:0,25,87	0/0:5,0:22:32.56:0,33,94	0/0:4,0:17:22.39:0,22,65	0/0:21,0:21:22.76:0,23,300	1/1:4,10:15:7.97:226,8,0	1/1:0,25:25:60.10:584,60,0	1/1:3,17:20:39:368,39,0	0/0:10,0:23:23.07:0,23,68	0/0:3,0:15:22.39:0,22,65	0/0:4,0:27:43.71:0,44,140	0/0:13,0:14:22.85:0,23,159	0/0:18,3:21:15.42:0,15,277	0/0:23,2:25:30.43:0,30,382	0/1:6,15:22:4.92:267,0,5	0/0:5,0:25:32.93:0,33,122	0/0:6,0:19:26.36:0,26,76	0/0:1,0:17:30.55:0,31,88
chr10	8651594	.	C	CTA	8953.79	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=2.428;DP=798;FS=11.104;HRun=0;HaplotypeScore=129.6998;InbreedingCoeff=0.9798;MQ=84.64;MQ0=0;MQRankSum=-1.077;QD=42.84;ReadPosRankSum=2.340;VQSLOD=5.5851;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,163,2384	0/0:10,0:10:30.10:0,30,441	0/0:27,0:27:5.68:0,6,771	0/0:25,0:25:59.74:0,60,797	0/0:33,0:33:84.28:0,84,1236	0/0:20,0:20:60.20:0,60,883	0/0:27,0:27:72.23:0,72,1038	0/0:27,0:27:81.26:0,81,1161	1/1:1,31:32:75.26:1403,75,0	1/1:5,28:34:90.18:1486,90,0	1/1:4,23:28:48.16:899,48,0	0/0:35,0:35:93.30:0,93,1350	0/0:30,0:30:84.26:0,84,1197	0/0:30,0:30:90.28:0,90,1286	1/1:0,38:38:99:1910,102,0	0/0:34,0:34:99:0,99,1436	0/0:43,0:43:99:0,123,1764	0/0:24,0:24:66.22:0,66,972	0/0:17,0:17:51.17:0,51,751	0/0:26,0:26:63.20:0,63,906	0/0:45,0:45:99:0,135,1935	1/1:1,22:24:51.17:955,51,0	1/1:1,20:21:51.07:954,51,0	1/1:2,29:32:72.25:1348,72,0	0/0:19,0:18:48.16:0,48,706	0/0:25,0:25:66.22:0,66,972	0/0:23,0:23:66.21:0,66,951	0/0:14,0:14:42.14:0,42,618
chr10	8652236	.	TCACTCA	T	4359.03	PASS	AB=0.947;AC=15;AF=0.268;AN=56;BaseQRankSum=0.242;DP=674;FS=7.109;HRun=0;HaplotypeScore=190.4153;InbreedingCoeff=0.8774;MQ=50.16;MQ0=22;MQRankSum=-4.713;QD=25.95;ReadPosRankSum=4.013;VQSLOD=3.9658;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:27:41.79:0,42,633	0/0:9,0:9:17.95:0,18,284	0/0:62,0:9:17.98:0,18,253	0/0:63,0:13:16.66:0,17,170	0/0:20,0:21:32.63:0,33,481	0/0:22,0:22:45.08:0,45,830	0/0:22,0:24:13.99:0,14,362	0/0:22,0:29:32.26:0,32,996	1/1:0,15:16:20.97:396,21,0	1/1:1,18:19:51.58:958,52,0	1/1:1,21:22:33.11:752,33,0	0/0:26,0:25:52.63:0,53,1049	0/0:19,0:19:47.15:0,47,1037	0/0:20,0:20:23.82:0,24,337	1/1:4,19:24:36.11:747,36,0	0/0:18,0:18:42.99:0,43,905	0/0:22,0:23:9.08:0,9,634	0/0:15,0:16:27.47:0,27,446	0/0:15,0:14:34.25:0,34,615	0/0:21,0:21:27.07:0,27,512	0/0:25,0:25:22.86:0,23,369	1/1:1,26:29:28.65:818,29,0	1/1:2,16:19:19.03:467,19,0	1/1:3,18:21:13.47:205,13,0	0/0:34,0:35:47.54:0,48,675	0/1:17,1:18:16.50:17,0,920	0/0:20,0:19:10.39:0,10,607	0/0:8,0:7:17.95:0,18,317
chr10	8652240	.	T	TCACACACA	7350.05	PASS	AB=0.910;AC=40;AF=0.714;AN=56;BaseQRankSum=-9.962;DP=699;FS=13.631;HRun=0;HaplotypeScore=199.4951;InbreedingCoeff=0.6018;MQ=50.51;MQ0=23;MQRankSum=1.576;QD=12.89;ReadPosRankSum=-1.617;VQSLOD=2.0628;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:20,8:31:11.99:429,12,0	1/1:5,5:10:6.02:180,6,0	0/1:65,0:11:4.12:4,0,117	0/1:66,0:15:7.16:7,0,22	1/1:9,12:24:5.70:247,6,0	1/1:7,10:24:21.07:537,21,0	1/1:16,7:25:8.22:307,8,0	1/1:27,0:27:26.22:335,26,0	0/1:16,0:16:0.60:1,0,261	0/0:18,0:18:2.16:0,2,499	0/0:21,0:21:30.10:0,30,551	1/1:13,0:26:26.89:498,27,0	1/1:5,0:19:27.06:474,27,0	1/1:11,0:22:8.31:135,8,0	0/0:22,0:22:29.37:0,29,490	1/1:6,11:20:28.63:895,29,0	1/1:13,8:23:23.67:802,24,0	1/1:9,6:16:9.50:359,10,0	1/1:10,0:17:23.90:243,24,0	1/1:11,0:26:12.04:239,12,0	1/1:10,0:23:5.74:88,6,0	0/0:28,0:29:17.16:0,17,593	0/0:18,0:18:20.52:0,21,370	0/0:20,0:21:12.04:0,12,229	1/1:12,17:33:11.83:482,12,0	0/1:11,0:22:19.59:459,0,20	1/1:4,0:20:27.46:473,27,0	1/1:4,0:8:10.26:157,10,0
chr10	8653523	.	A	ATGTGTG	6781.91	PASS	AB=0.714;AC=48;AF=0.923;AN=52;BaseQRankSum=-1.593;DP=649;FS=2.301;HRun=0;HaplotypeScore=176.0398;InbreedingCoeff=0.1019;MQ=62.15;MQ0=5;MQRankSum=-2.536;QD=11.69;ReadPosRankSum=-1.583;VQSLOD=4.1017;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:34:2.79:47,3,0	1/1:6,4:10:15.05:483,15,0	./.	./.	1/1:23,0:32:5.54:75,6,0	1/1:14,7:24:12.04:349,12,0	0/1:10,3:14:41.76:247,0,42	1/1:22,0:22:24.06:464,24,0	0/0:12,0:20:5.10:0,5,11	1/1:16,0:27:29.37:295,29,0	0/1:6,0:13:16.98:39,0,17	1/1:30,0:29:8.28:117,8,0	1/1:26,0:26:14.98:321,15,0	1/1:17,0:18:3.01:78,3,0	1/1:19,6:26:12.04:328,12,0	1/1:26,3:41:27.07:645,27,0	1/1:21,7:30:10.12:234,10,0	1/1:14,3:29:21.07:502,21,0	1/1:13,0:11:6.02:153,6,0	1/1:14,0:14:3.01:78,3,0	1/1:29,0:28:14.81:329,15,0	1/1:11,1:21:6.02:135,6,0	1/1:13,0:19:5.57:130,6,0	1/1:23,8:37:5.61:134,6,0	1/1:16,2:24:9.03:231,9,0	1/1:19,1:25:42.14:1044,42,0	1/1:15,0:15:2.99:24,3,0	1/1:6,0:6:12.04:300,12,0
chr10	8656240	.	T	TACACACAC	6731.84	PASS	AB=0.689;AC=48;AF=0.923;AN=52;BaseQRankSum=-3.116;DP=678;FS=0.000;HRun=0;HaplotypeScore=176.5342;InbreedingCoeff=-0.0826;MQ=63.02;MQ0=14;MQRankSum=-1.980;QD=11.20;ReadPosRankSum=-1.336;VQSLOD=3.3241;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:24:3.01:81,3,0	1/1:10,0:10:11.67:219,12,0	./.	./.	1/1:24,0:24:18.03:453,18,0	1/1:13,0:25:6.02:171,6,0	1/1:25,0:30:8.65:206,9,0	1/1:21,0:21:17.86:144,18,0	1/1:9,0:19:21.05:619,21,0	1/1:27,0:27:39:544,39,0	1/1:11,0:20:3.01:104,3,0	0/1:10,0:22:3.84:62,0,4	0/1:22,0:30:37.76:391,0,38	0/1:10,0:24:10.57:98,0,11	1/1:12,0:26:18.04:357,18,0	1/1:17,9:26:12.04:445,12,0	1/1:12,1:22:9.03:331,9,0	1/1:22,0:19:22.12:569,22,0	1/1:8,0:8:1.82:5,2,0	1/1:11,0:27:2.18:131,2,0	1/1:18,0:29:6.85:45,7,0	0/1:14,0:29:40.76:230,0,41	1/1:17,6:25:9.03:291,9,0	1/1:20,0:40:11.76:227,12,0	1/1:19,0:24:8.98:297,9,0	1/1:18,0:18:36.02:438,36,0	1/1:8,0:16:20.95:201,21,0	1/1:5,0:11:8.98:73,9,0
chr10	8657639	.	CATCTATCT	C	3974.37	PASS	AB=0.858;AC=18;AF=0.360;AN=50;BaseQRankSum=0.334;DP=629;FS=8.149;HRun=0;HaplotypeScore=168.1354;InbreedingCoeff=0.7211;MQ=57.95;MQ0=6;MQRankSum=-7.991;QD=15.71;ReadPosRankSum=-1.076;VQSLOD=2.2678;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,7:33:4.55:0,5,28	1/1:4,4:8:9.03:222,9,0	./.	./.	0/0:12,0:24:38.90:0,39,315	1/1:12,9:21:18.06:443,18,0	0/0:12,0:12:0.98:0,1,129	0/0:23,0:22:5.93:0,6,40	0/0:11,0:20:17.96:0,18,146	1/1:20,13:34:39.09:751,39,0	1/1:6,10:15:12.04:297,12,0	0/0:11,0:24:12.03:0,12,282	0/0:17,0:23:30.05:0,30,693	0/0:7,0:20:21.04:0,21,572	1/1:14,14:28:18.06:445,18,0	1/1:15,0:33:30.10:558,30,0	0/0:16,0:30:32.94:0,33,310	./.	0/0:17,0:18:15.04:0,15,364	0/0:12,0:31:48.14:0,48,1526	0/0:15,0:17:24.01:0,24,639	1/1:9,17:26:27.09:665,27,0	1/1:9,11:20:8.82:222,9,0	0/0:0,4:4:0:0,0,0	0/1:21,11:32:0.73:352,0,1	0/1:22,1:35:20.01:20,0,1093	0/0:18,0:37:29.84:0,30,692	0/0:15,0:22:7.58:0,8,213
chr10	8658815	.	AGAG	A	3961.81	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=11.886;DP=605;FS=1.937;HRun=0;HaplotypeScore=87.4598;InbreedingCoeff=0.9724;MQ=65.90;MQ0=6;MQRankSum=2.411;QD=27.70;ReadPosRankSum=2.450;VQSLOD=3.6925;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:47:99:0,99,1856	0/0:6,0:6:12.02:0,12,210	0/0:25,0:20:38.47:0,38,677	0/0:31,0:23:18.52:0,19,404	0/0:13,0:13:27.08:0,27,505	0/0:12,0:12:30.09:0,30,570	0/0:26,0:26:54.14:0,54,959	0/0:22,0:21:50.93:0,51,933	1/1:3,27:30:59.75:882,60,0	1/1:5,19:24:57.14:794,57,0	1/1:1,6:7:6.02:88,6,0	0/0:30,0:29:69.21:0,69,1291	0/0:38,0:38:96.30:0,96,1910	0/0:33,0:33:78.20:0,78,1463	1/1:5,27:32:54.18:795,54,0	0/0:15,0:15:36.12:0,36,746	0/0:28,0:29:78.09:0,78,1449	0/0:17,0:17:44.92:0,45,727	0/0:16,0:16:30.01:0,30,500	0/0:17,0:17:48.15:0,48,957	0/0:22,0:22:54.15:0,54,1008	1/1:2,18:20:47.96:608,48,0	1/1:0,13:13:24.08:353,24,0	1/1:1,16:17:30.10:442,30,0	0/0:12,0:12:24.08:0,24,496	0/0:17,0:17:48.15:0,48,904	0/0:22,0:22:63.19:0,63,1227	0/0:10,0:10:27.09:0,27,559
chr10	8659329	.	T	TACAC	18074.07	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-1.798;DP=626;FS=6.340;HRun=0;HaplotypeScore=160.8648;InbreedingCoeff=0.7504;MQ=55.62;MQ0=9;MQRankSum=-2.344;QD=30.74;ReadPosRankSum=3.103;VQSLOD=4.6804;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,12:22:32.85:700,33,0	1/1:3,4:8:12.04:291,12,0	0/0:15,0:7:6.02:0,6,98	0/0:23,0:12:7.51:0,8,81	1/1:15,16:35:35.52:752,36,0	1/1:6,11:20:32.83:724,33,0	1/1:17,15:33:42.11:956,42,0	1/1:18,8:26:42.08:903,42,0	1/1:9,0:12:9.03:157,9,0	1/1:25,0:33:57.19:1039,57,0	1/1:14,0:20:30.10:517,30,0	1/1:9,16:24:39.13:927,39,0	1/1:12,19:32:45.14:1038,45,0	1/1:9,13:24:44.37:946,44,0	1/1:13,0:19:24.08:419,24,0	1/1:6,18:25:51.18:1238,51,0	1/1:10,15:25:36.12:873,36,0	1/1:8,14:26:18.90:803,19,0	1/1:8,7:14:21.07:509,21,0	1/1:12,15:27:45.15:1069,45,0	1/1:6,7:13:15.05:364,15,0	1/1:15,0:24:20.40:363,20,0	1/1:17,0:28:21.07:367,21,0	1/1:9,0:9:3.01:52,3,0	1/1:7,14:23:41.80:937,42,0	1/1:12,17:30:59.85:1213,60,0	1/1:14,10:26:35.80:677,36,0	1/1:2,3:5:12.01:239,12,0
chr10	8659393	.	ATC	A	730.97	PASS	AB=0.962;AC=11;AF=0.196;AN=56;BaseQRankSum=-2.639;DP=587;FS=1.973;HRun=0;HaplotypeScore=219.6380;InbreedingCoeff=0.6475;MQ=55.36;MQ0=18;MQRankSum=1.628;QD=5.62;ReadPosRankSum=0.351;VQSLOD=3.1342;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:55.93:0,56,416	0/0:7,0:7:11.43:0,11,81	0/1:33,0:12:3.24:3,0,69	0/0:36,0:13:4.76:0,5,104	0/0:30,0:30:35.70:0,36,294	0/0:25,0:24:29.25:0,29,194	0/0:27,0:26:46.48:0,46,377	0/0:33,0:31:89.35:0,89,668	1/1:12,3:15:23.89:202,24,0	1/1:20,1:21:30.62:366,31,0	1/1:12,1:13:11.94:90,12,0	0/0:27,0:27:45.66:0,46,304	0/0:26,0:25:33.80:0,34,211	0/0:22,0:21:23.48:0,23,179	1/1:14,1:15:10.11:68,10,0	0/0:27,0:27:43.02:0,43,292	0/0:10,0:9:23.87:0,24,184	0/0:13,0:13:24.32:0,24,172	0/0:19,0:19:49.21:0,49,354	0/0:23,0:22:11.29:0,11,62	0/0:17,0:19:20.95:0,21,189	0/1:16,1:16:3.29:145,0,3	0/0:14,0:13:1.89:0,2,6	0/1:15,1:15:13.19:19,0,13	0/0:12,0:11:16.50:0,17,124	0/0:22,0:21:28.79:0,29,367	0/0:23,0:23:44.30:0,44,267	0/0:9,0:7:9.53:0,10,46
chr10	8659397	.	CTGTG	C	1893.23	PASS	AB=0.938;AC=34;AF=0.680;AN=50;BaseQRankSum=4.080;DP=580;FS=11.601;HRun=0;HaplotypeScore=221.1630;InbreedingCoeff=0.5037;MQ=53.08;MQ0=20;MQRankSum=-4.106;QD=5.02;ReadPosRankSum=-2.503;VQSLOD=1.1574;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:32:6.01:56,6,0	1/1:5,0:7:6:54,6,0	./.	0/0:36,0:13:0.89:0,1,2	1/1:25,0:30:0.36:1,0,0	1/1:16,0:23:14.95:140,15,0	1/1:21,0:24:2.74:28,3,0	./.	1/1:16,0:15:9.01:83,9,0	0/1:21,0:21:1.32:1,0,102	0/0:14,0:14:0.35:0,0,1	1/1:17,8:26:18.05:261,18,0	1/1:18,4:22:15.04:214,15,0	1/1:18,3:21:6.33:94,6,0	0/0:15,0:15:6.47:0,6,70	1/1:18,0:27:18.02:168,18,0	./.	1/1:12,0:13:6.01:56,6,0	1/1:15,5:19:6.16:221,6,0	1/1:14,6:22:11.69:149,12,0	0/0:19,0:18:2.99:0,3,24	0/0:16,0:15:9.02:0,9,115	0/0:13,0:12:6.02:0,6,91	0/0:18,0:17:2.80:0,3,49	1/1:11,0:12:5.90:56,6,0	0/1:18,1:20:2.76:91,0,3	1/1:16,5:23:21.06:289,21,0	1/1:8,1:7:6.01:75,6,0
chr10	8659440	.	TGTAC	T	1582.46	PASS	AB=0.909;AC=16;AF=0.286;AN=56;BaseQRankSum=8.077;DP=518;FS=5.893;HRun=0;HaplotypeScore=162.4471;InbreedingCoeff=0.4487;MQ=58.14;MQ0=16;MQRankSum=-3.220;QD=8.51;ReadPosRankSum=2.201;VQSLOD=2.4408;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:27:53.39:0,53,765	0/0:3,0:2:2.70:0,3,7	0/0:29,0:12:28.85:0,29,403	0/0:37,0:17:31.50:0,31,497	0/0:13,0:13:14.80:0,15,220	0/0:23,0:22:36.55:0,37,475	0/0:25,0:23:35.11:0,35,436	0/0:20,0:20:60.17:0,60,823	1/1:10,0:9:24.08:341,24,0	1/1:15,0:15:42.09:600,42,0	1/1:15,0:15:5.65:97,6,0	0/1:22,0:22:34.69:35,0,313	0/1:25,0:25:21.72:22,0,590	0/0:22,0:22:12.89:0,13,554	1/1:12,0:12:8.64:100,9,0	0/0:27,0:27:57.19:0,57,762	0/0:11,0:11:23.84:0,24,321	0/0:9,0:9:22.68:0,23,293	0/1:20,0:19:41.11:41,0,405	0/0:25,0:24:9.22:0,9,457	0/0:21,0:21:33.55:0,34,468	0/1:14,2:15:0.93:263,0,1	0/1:3,10:13:0.06:1,0,0	1/1:17,1:18:0.10:210,0,0	0/0:12,0:12:15.80:0,16,200	0/0:15,0:15:17.71:0,18,398	0/1:20,0:20:41.40:41,0,422	0/0:11,0:9:7.25:0,7,245
chr10	8659442	.	TAC	T	1333.29	PASS	AB=0.979;AC=11;AF=0.196;AN=56;BaseQRankSum=4.365;DP=524;FS=6.476;HRun=0;HaplotypeScore=149.5325;InbreedingCoeff=0.7062;MQ=62.15;MQ0=15;MQRankSum=0.633;QD=14.98;ReadPosRankSum=0.347;VQSLOD=3.2155;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:30:65.40:0,65,887	0/0:3,0:2:5.70:0,6,29	0/0:32,0:15:37.77:0,38,518	0/0:38,0:18:34.33:0,34,539	0/0:13,0:13:15.03:0,15,220	0/0:26,0:25:54.99:0,55,683	0/0:25,0:24:39.53:0,40,512	0/0:21,0:21:63.18:0,63,875	1/1:9,1:9:24.06:299,24,0	1/1:11,3:14:42.09:563,42,0	1/1:0,14:14:6.02:96,6,0	0/0:22,0:22:44.62:0,45,480	0/0:26,0:26:60.51:0,61,709	0/0:24,0:24:53.83:0,54,712	1/1:7,4:11:8.03:84,8,0	0/0:27,0:27:68.61:0,69,846	0/0:11,0:11:23.79:0,24,320	0/0:10,0:10:24.02:0,24,321	0/0:20,0:19:32.83:0,33,557	0/0:24,0:24:47.65:0,48,575	0/0:21,0:21:33.07:0,33,489	0/1:15,0:14:3.81:238,0,4	0/1:10,0:10:0.15:0,0,0	0/1:14,1:15:15.96:210,0,16	0/0:13,0:13:17.94:0,18,223	0/0:16,0:16:41.70:0,42,517	0/0:20,0:20:50.39:0,50,570	0/0:11,0:9:23.91:0,24,296
chr10	8660108	.	ATTCTT	A	331.90	PASS	AC=10;AF=0.185;AN=54;BaseQRankSum=6.151;DP=483;FS=42.112;HRun=0;HaplotypeScore=106.8755;InbreedingCoeff=0.8247;MQ=96.06;MQ0=0;MQRankSum=-4.759;QD=25.53;ReadPosRankSum=2.404;VQSLOD=1.2615;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:84.29:0,84,2791	0/0:9,0:9:24.08:0,24,799	0/0:29,0:29:66.83:0,67,2478	0/0:19,0:19:57.19:0,57,1645	0/0:27,0:27:78.22:0,78,2432	0/0:27,0:27:81.26:0,81,2578	0/0:13,0:13:39.13:0,39,1275	0/0:24,0:24:72.24:0,72,2347	1/1:0,2:2:3.01:42,3,0	1/1:0,1:1:3.01:44,3,0	1/1:0,3:3:9.03:123,9,0	0/0:13,0:13:39.13:0,39,1298	0/0:25,0:25:75.24:0,75,2425	0/0:22,0:22:66.23:0,66,2206	./.	0/0:25,0:25:72.23:0,72,2285	0/0:27,0:27:78.27:0,78,2494	0/0:13,0:13:39.13:0,39,1298	0/0:21,0:21:60.21:0,60,1958	0/0:24,0:24:72.22:0,72,2318	0/0:23,0:23:69.24:0,69,2276	1/1:0,5:5:15.05:197,15,0	1/1:0,2:2:6.02:71,6,0	0/0:1,0:1:3.01:0,3,100	0/0:35,0:35:99:0,105,3376	0/0:29,0:29:87.30:0,87,2838	0/0:27,0:26:81.28:0,81,2696	0/0:9,0:9:21.07:0,21,700
chr10	8660124	.	C	CTTCTG	721.11	PASS	AC=10;AF=0.185;AN=54;BaseQRankSum=6.143;DP=482;FS=36.888;HRun=0;HaplotypeScore=106.5778;InbreedingCoeff=0.8207;MQ=95.01;MQ0=0;MQRankSum=-4.992;QD=55.47;ReadPosRankSum=2.846;VQSLOD=1.9754;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:93.32:0,93,2160	0/0:6,0:6:18.03:0,18,352	0/0:27,0:27:81.27:0,81,1746	0/0:19,0:19:39.96:0,40,1100	0/0:26,0:26:63.22:0,63,1446	0/0:26,0:26:75.26:0,75,1701	0/0:14,0:14:42.14:0,42,937	0/0:24,0:24:66.21:0,66,1467	1/1:0,2:2:3.01:74,3,0	1/1:0,1:1:3.01:77,3,0	1/1:0,3:3:9.03:217,9,0	0/0:14,0:14:39.13:0,39,889	0/0:26,0:26:72.24:0,72,1630	0/0:27,0:27:78.25:0,78,1732	./.	0/0:23,0:23:69.24:0,69,1608	0/0:25,0:25:72.25:0,72,1678	0/0:10,0:10:30.10:0,30,699	0/0:23,0:23:60.21:0,60,1398	0/0:23,0:23:69.18:0,69,1506	0/0:25,0:25:72.25:0,72,1669	1/1:0,5:5:15.05:360,15,0	1/1:0,2:2:6.02:138,6,0	0/0:1,0:1:3.01:0,3,70	0/0:34,0:34:99:0,99,2290	0/0:29,0:29:84.29:0,84,1946	0/0:26,0:25:78.27:0,78,1811	0/0:8,0:8:15.05:0,15,350
chr10	8660131	.	A	AATT	2552.19	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=11.528;DP=514;FS=136.565;HRun=0;HaplotypeScore=116.6992;InbreedingCoeff=0.8627;MQ=89.47;MQ0=0;MQRankSum=-11.197;QD=45.57;ReadPosRankSum=-0.270;VQSLOD=-0.0869;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:93.30:0,93,1613	0/0:3,0:3:9.03:0,9,157	0/0:25,0:25:69.17:0,69,1119	0/0:17,0:17:45.13:0,45,753	0/0:23,0:23:66.22:0,66,1127	0/0:24,0:24:69.23:0,69,1191	0/0:10,0:10:30.10:0,30,529	0/0:27,0:27:75.24:0,75,1264	1/1:7,2:9:21.04:361,21,0	1/1:8,1:9:27.09:600,27,0	1/1:7,3:10:30.02:516,30,0	0/0:13,0:13:39.13:0,39,688	0/0:25,0:25:66.18:0,66,1121	0/0:26,0:26:72.23:0,72,1231	1/1:4,0:4:6.02:125,6,0	0/0:25,0:25:75.24:0,75,1295	0/0:26,0:26:69.22:0,69,1188	0/0:10,0:10:19.39:0,19,466	0/0:24,0:24:72.25:0,72,1270	0/0:21,0:21:60.15:0,60,997	0/0:25,0:25:75.24:0,75,1287	1/1:8,5:13:35.85:685,36,0	1/1:5,2:7:18.02:296,18,0	0/1:4,0:4:40.90:153,0,41	0/0:35,0:35:99:0,105,1818	0/0:31,0:31:93.32:0,93,1641	0/0:27,0:26:81.22:0,81,1368	0/0:8,0:8:18.53:0,19,318
chr10	8660226	.	AGGT	A	3727.58	PASS	AB=0.556;AC=13;AF=0.232;AN=56;BaseQRankSum=13.325;DP=560;FS=167.222;HRun=0;HaplotypeScore=107.3287;InbreedingCoeff=0.8946;MQ=92.51;MQ0=0;MQRankSum=-13.075;QD=54.02;ReadPosRankSum=0.844;VQSLOD=-0.5511;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,117,2863	0/0:7,0:7:21.07:0,21,518	0/0:25,0:25:72.25:0,72,1747	0/0:26,0:26:78.26:0,78,1772	0/0:21,0:21:60.21:0,60,1475	0/0:26,0:26:78.24:0,78,1821	0/0:18,0:18:54.19:0,54,1310	0/0:31,0:31:93.32:0,93,2272	1/1:0,11:11:30.10:559,30,0	1/1:0,17:17:51.17:950,51,0	1/1:0,9:9:27.09:503,27,0	0/0:16,0:16:48.16:0,48,1183	0/0:35,0:35:99:0,105,2588	0/0:27,0:27:81.28:0,81,1995	1/1:0,14:14:42.14:782,42,0	0/0:34,0:34:99:0,102,2501	0/0:23,0:23:66.23:0,66,1626	0/0:10,0:10:30.10:0,30,739	0/0:15,0:15:42.14:0,42,1032	0/0:31,0:31:93.32:0,93,2238	0/0:21,0:21:63.22:0,63,1553	1/1:0,6:6:18.06:335,18,0	1/1:0,7:7:21.07:391,21,0	0/1:1,4:5:58.91:208,0,59	0/0:27,0:27:78.27:0,78,1899	0/0:28,1:29:28.40:0,28,1941	0/0:24,0:24:72.25:0,72,1741	0/0:6,0:6:18.06:0,18,443
chr10	8660652	.	GATATATATATATATATAT	G	2655.29	PASS	AB=0.875;AC=13;AF=0.542;AN=24;BaseQRankSum=2.852;DP=230;FS=0.000;HRun=0;HaplotypeScore=130.9337;InbreedingCoeff=0.4940;MQ=73.67;MQ0=2;MQRankSum=-3.359;QD=28.55;ReadPosRankSum=2.768;VQSLOD=2.5950;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	0/0:18,0:8:5.87:0,6,18	./.	./.	./.	0/0:29,0:29:0:0,0,0	./.	./.	./.	1/1:7,2:10:9.03:416,9,0	1/1:14,2:16:9.02:318,9,0	./.	0/0:8,0:8:3.01:0,3,66	./.	0/0:8,0:8:9.03:0,9,579	0/0:8,0:8:6.02:0,6,391	1/1:16,2:19:9.02:416,9,0	0/1:12,2:14:24.54:305,0,25	./.	./.	./.	./.	./.	1/1:9,3:12:6.02:291,6,0	1/1:13,5:18:15.05:727,15,0	1/1:2,2:4:6.02:291,6,0
chr10	8660686	.	T	TCC	2314.85	PASS	AC=20;AF=0.500;AN=40;BaseQRankSum=-1.126;DP=127;FS=5.040;HRun=0;HaplotypeScore=46.0899;InbreedingCoeff=0.6228;MQ=51.66;MQ0=1;MQRankSum=-0.820;QD=26.01;ReadPosRankSum=1.336;VQSLOD=4.0064;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:2,0:2:3.01:0,3,45	./.	./.	0/0:8,0:2:0.47:0,0,1	./.	./.	0/0:1,0:1:3.01:0,3,46	1/1:1,21:23:63.17:902,63,0	0/0:2,0:2:5.99:0,6,49	0/0:1,0:1:0:0,0,0	./.	1/1:6,0:6:5.48:75,5,0	1/1:7,0:7:11.87:121,12,0	1/1:4,0:4:6.02:103,6,0	0/0:1,0:1:3:0,3,25	0/0:1,0:1:3:0,3,26	0/0:8,0:8:18.05:0,18,249	0/0:9,0:9:15.01:0,15,183	1/1:7,0:7:15.86:169,16,0	1/1:9,0:9:20.76:218,21,0	1/1:4,0:4:6.02:101,6,0	./.	./.	./.	0/0:1,0:1:3.01:0,3,46	1/1:10,0:10:2.01:266,2,0	1/1:13,0:13:29.91:297,30,0	1/1:6,0:6:17.96:205,18,0
chr10	8661112	.	AACACAC	A	2634.43	PASS	AB=0.957;AC=38;AF=0.731;AN=52;BaseQRankSum=2.954;DP=591;FS=2.615;HRun=0;HaplotypeScore=157.4800;InbreedingCoeff=-0.1694;MQ=65.39;MQ0=7;MQRankSum=-2.687;QD=5.13;ReadPosRankSum=-3.132;VQSLOD=1.7850;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:31,0:31:4.58:249,5,0	0/1:9,0:10:7.96:89,0,8	./.	./.	0/1:10,13:23:17.91:54,0,18	1/1:15,0:15:5.28:68,5,0	1/1:33,0:33:9.27:87,9,0	0/0:22,0:21:2.24:0,2,11	0/1:23,0:23:13.92:69,0,14	1/1:32,0:30:6.02:84,6,0	1/1:27,0:27:12.04:167,12,0	0/1:25,0:25:8.84:142,0,9	0/1:23,0:23:5.08:209,0,5	0/1:17,0:17:14.47:77,0,14	1/1:21,0:20:6.02:84,6,0	1/1:13,0:20:11.51:171,12,0	0/1:15,0:15:11.48:142,0,11	1/1:15,0:14:17.57:224,18,0	1/1:11,0:11:0.43:1,0,0	0/1:20,0:20:31.18:99,0,31	0/1:23,0:23:4.47:33,0,4	1/1:17,0:17:3.01:42,3,0	1/1:15,0:14:5.52:84,6,0	0/1:23,0:23:0:0,0,0	0/1:13,0:14:5.91:206,0,6	1/1:27,0:27:12.62:134,13,0	1/1:23,0:22:15.12:239,15,0	0/1:11,0:11:9.43:12,0,9
chr10	8661130	.	CACACACACACACACACACACACACACACAG	C	2772.40	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=5.675;DP=661;FS=0.778;HRun=0;HaplotypeScore=402.7231;InbreedingCoeff=0.8040;MQ=54.97;MQ0=15;MQRankSum=0.827;QD=19.12;ReadPosRankSum=1.542;VQSLOD=0.9031;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:42:63.22:0,63,5174	0/0:11,0:11:24.08:0,24,1400	0/0:17,0:8:4.26:0,4,46	0/0:29,0:10:3.01:0,3,85	0/0:24,0:24:18.04:0,18,1125	0/0:17,0:17:21.07:0,21,1312	0/0:40,0:39:52.37:0,52,3678	0/0:22,0:20:42.14:0,42,1864	0/0:31,0:30:12.17:0,12,473	1/1:13,19:29:44.71:795,45,0	1/1:14,13:27:12.04:928,12,0	0/0:29,0:29:15.46:0,15,921	0/0:26,0:26:26.27:0,26,1498	0/0:22,0:22:15.05:0,15,884	1/1:14,14:27:6.49:464,6,0	0/0:23,0:23:29.60:0,30,2094	0/0:14,0:14:27.09:0,27,1702	0/0:20,0:19:45.12:0,45,3587	0/0:16,0:15:36.81:0,37,1342	0/0:25,0:25:48.64:0,49,3389	0/0:27,0:26:45.63:0,46,2902	1/1:7,13:20:5.05:238,5,0	1/1:8,10:17:6.06:464,6,0	1/1:20,0:20:2.27:44,2,0	0/0:18,0:18:32.96:0,33,2107	0/0:29,0:28:65.24:0,65,3564	0/0:22,0:21:27.56:0,28,1550	0/0:11,0:11:21.07:0,21,1257
chr10	8661150	.	CACACACACAG	C	2590.94	PASS	AB=0.967;AC=31;AF=0.554;AN=56;BaseQRankSum=7.768;DP=596;FS=13.120;HRun=0;HaplotypeScore=179.8551;InbreedingCoeff=-0.1454;MQ=53.48;MQ0=15;MQRankSum=-1.505;QD=5.67;ReadPosRankSum=0.460;VQSLOD=1.7735;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:40,0:39:17.48:17,0,585	0/1:7,0:7:11.84:12,0,50	0/1:29,0:7:20.30:20,0,38	0/0:42,0:14:10.88:0,11,96	0/0:22,0:22:2.81:0,3,80	0/1:18,0:18:9.04:9,0,222	0/0:34,0:33:14.81:0,15,571	0/1:26,0:24:99:161,0,102	0/1:8,23:30:5.09:161,0,5	1/1:21,0:19:41.71:415,42,0	1/1:13,0:13:12.04:291,12,0	1/1:27,0:27:5.54:18,6,0	0/1:28,0:28:0.06:78,0,0	0/0:25,0:25:2.37:0,2,9	1/1:14,0:14:6.02:146,6,0	0/1:18,0:18:99:165,0,230	0/0:16,0:16:16.59:0,17,238	0/1:18,0:17:12.37:12,0,347	0/1:13,0:11:17.42:17,0,84	0/1:21,0:21:84.75:128,0,85	1/1:32,0:31:11.22:338,11,0	1/1:13,0:13:3.01:73,3,0	1/1:10,0:10:6.04:145,6,0	1/1:14,0:14:20.81:165,21,0	0/1:17,0:17:73.67:74,0,186	0/1:23,0:22:92.41:144,0,92	0/1:14,1:15:9.97:107,0,10	0/1:9,0:9:26.36:61,0,26
chr10	8661154	.	CACACAG	C	4267.17	PASS	AB=0.943;AC=39;AF=0.696;AN=56;BaseQRankSum=10.178;DP=601;FS=47.678;HRun=0;HaplotypeScore=147.9867;InbreedingCoeff=-0.3099;MQ=54.79;MQ0=14;MQRankSum=-0.133;QD=7.62;ReadPosRankSum=1.546;VQSLOD=2.1621;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:41,0:40:99:157,0,328	0/1:5,0:5:32.97:47,0,33	0/1:34,0:11:13.42:13,0,85	0/0:41,0:15:9.51:0,10,122	0/1:23,0:23:36.73:37,0,80	0/1:18,0:18:49.16:49,0,199	0/1:34,0:33:27.41:27,0,376	0/1:27,0:25:91.90:196,0,92	0/1:31,0:30:4.94:88,0,5	1/1:21,0:19:41.71:359,42,0	1/1:13,0:13:12.04:180,12,0	1/1:6,23:29:8.64:204,9,0	1/1:5,21:26:6.74:295,7,0	1/1:5,19:24:5.70:121,6,0	1/1:14,0:14:6.02:90,6,0	0/1:19,0:19:63.58:64,0,161	0/1:15,0:15:50.49:50,0,133	0/1:21,0:20:99:169,0,104	0/1:14,0:12:49.11:80,0,49	1/1:20,0:20:31.60:331,32,0	1/1:31,0:30:67.61:484,68,0	1/1:13,0:13:3.01:45,3,0	1/1:10,0:10:5.52:90,6,0	1/1:16,0:16:23.92:188,24,0	0/1:16,0:16:89.64:90,0,139	0/1:6,17:22:8.33:388,0,8	0/1:3,10:13:6.34:305,0,6	1/1:9,0:9:10.45:119,10,0
chr10	8661156	.	CACAG	C	3443.64	PASS	AB=0.995;AC=39;AF=0.696;AN=56;BaseQRankSum=10.855;DP=604;FS=43.291;HRun=0;HaplotypeScore=139.6353;InbreedingCoeff=-0.3220;MQ=56.01;MQ0=12;MQRankSum=0.686;QD=6.15;ReadPosRankSum=0.542;VQSLOD=1.0944;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:41,0:40:99:134,0,338	0/1:5,0:5:32.97:33,0,33	0/1:34,0:11:13.42:13,0,85	0/0:44,0:18:1.47:0,1,109	0/1:22,0:22:5.80:6,0,81	0/1:19,0:19:28.63:29,0,199	0/1:33,0:33:27.22:27,0,375	0/1:28,0:27:82.72:256,0,83	0/1:30,0:29:5.48:60,0,5	1/1:21,0:19:41.70:331,42,0	1/1:13,0:13:12.03:124,12,0	1/1:27,2:29:8.99:113,9,0	1/1:26,0:26:7.24:175,7,0	1/1:23,0:23:5.84:59,6,0	1/1:14,0:14:6.01:62,6,0	0/1:19,0:19:22.54:23,0,162	0/1:16,0:16:37.67:38,0,152	0/1:21,0:21:84.17:84,0,129	0/1:16,0:14:43.63:116,0,44	1/1:17,1:18:35.62:299,36,0	1/1:32,0:31:70.42:505,70,0	1/1:13,0:13:3.01:31,3,0	1/1:10,0:10:5.68:62,6,0	1/1:17,0:17:26.91:211,27,0	0/1:15,0:15:43.82:44,0,140	0/1:23,0:22:8.69:324,0,9	0/1:12,1:13:6.21:168,0,6	1/1:9,0:9:10:119,10,0
chr10	8661158	.	CAG	C	2810.78	PASS	AB=0.974;AC=38;AF=0.679;AN=56;BaseQRankSum=9.694;DP=600;FS=38.379;HRun=0;HaplotypeScore=126.5167;InbreedingCoeff=-0.2056;MQ=56.46;MQ0=12;MQRankSum=0.649;QD=5.03;ReadPosRankSum=-1.460;VQSLOD=1.4111;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:39,0:38:99:137,0,360	0/1:4,0:4:19.78:20,0,34	0/1:35,0:12:17.26:17,0,83	0/1:45,0:19:3.50:3,0,104	0/0:22,0:22:4.07:0,4,89	0/1:19,0:19:29.86:30,0,199	0/1:32,0:32:28.82:29,0,374	0/1:12,16:27:84.42:255,0,84	0/1:28,0:27:5.56:32,0,6	1/1:21,0:19:41.54:303,42,0	1/1:13,0:13:11.70:68,12,0	1/1:28,0:28:8.97:71,9,0	1/1:26,0:26:6.95:106,7,0	1/1:22,0:22:5.93:41,6,0	1/1:14,0:14:5.85:34,6,0	0/0:19,0:19:6.02:0,6,181	0/1:16,0:16:28.02:28,0,156	0/1:22,0:22:68.93:69,0,158	0/1:18,0:16:41.98:157,0,42	1/1:18,0:18:35.68:271,36,0	1/1:30,1:30:48.60:480,49,0	1/1:13,0:13:2.92:17,3,0	1/1:10,0:10:5.49:34,5,0	1/1:18,0:18:29.90:234,30,0	0/1:15,0:15:23.46:23,0,144	0/1:22,0:21:10.47:296,0,10	0/1:13,0:13:6.19:97,0,6	1/1:9,0:9:8.77:117,9,0
chr10	8662981	.	CTGTGTGTGTGTGTGTGTGTGTG	C	10280.02	PASS	AB=0.735;AC=34;AF=0.654;AN=52;BaseQRankSum=5.505;DP=447;FS=8.599;HRun=0;HaplotypeScore=273.3969;InbreedingCoeff=0.7026;MQ=43.63;MQ0=12;MQRankSum=-6.863;QD=35.09;ReadPosRankSum=-1.559;VQSLOD=2.2780;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:16,4:19:23.89:745,24,0	1/1:7,4:10:9.03:526,9,0	./.	./.	1/1:8,9:17:7.67:83,8,0	1/1:6,5:11:11.95:391,12,0	1/1:11,3:14:3.01:173,3,0	1/1:27,7:29:21.05:454,21,0	0/0:5,0:7:9.92:0,10,493	0/0:19,0:23:48.16:0,48,2618	0/0:10,0:13:24.07:0,24,1348	1/1:15,4:19:9.49:377,9,0	1/1:8,9:17:30:1371,30,0	1/1:16,4:20:12.02:260,12,0	0/0:9,0:17:24.08:0,24,1575	0/1:3,11:14:12.69:1032,0,13	1/1:7,3:10:12.04:660,12,0	0/1:9,1:10:9.01:530,0,9	1/1:9,3:10:12.04:633,12,0	1/1:13,5:18:8.96:234,9,0	0/0:15,0:14:0.47:0,0,1	0/0:10,0:12:17.65:0,18,976	0/0:16,0:19:19.67:0,20,1302	0/0:17,0:25:39.61:0,40,2621	1/1:12,8:20:21.02:796,21,0	1/1:15,4:19:21.05:895,21,0	1/1:12,2:14:9.03:469,9,0	1/1:9,3:12:18.06:650,18,0
chr10	8663041	.	A	AGGG	4663.51	PASS	AB=1.000;AC=36;AF=0.643;AN=56;BaseQRankSum=7.864;DP=490;FS=1.756;HRun=2;HaplotypeScore=226.1467;InbreedingCoeff=0.8765;MQ=71.42;MQ0=0;MQRankSum=-8.412;QD=13.44;ReadPosRankSum=3.212;VQSLOD=1.8083;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:30,1:31:25.58:385,26,0	1/1:11,0:10:13.09:118,13,0	0/0:23,0:21:60.15:0,60,874	0/0:27,0:24:53.05:0,53,807	1/1:31,0:31:42.65:293,43,0	1/1:15,0:15:13.38:165,13,0	1/1:15,0:15:32.21:203,32,0	1/1:17,0:17:18.82:199,19,0	0/0:10,0:10:27.08:0,27,419	0/0:13,0:13:36.12:0,36,562	0/0:17,0:17:36.09:0,36,538	1/1:18,2:21:52.63:395,53,0	1/1:18,0:19:47.39:375,47,0	1/1:23,2:25:61.71:467,62,0	0/0:13,0:13:31.84:0,32,439	1/1:14,3:17:10.37:255,10,0	1/1:15,0:15:18.44:194,18,0	1/1:13,0:13:27.57:203,28,0	0/1:24,0:24:0.55:274,0,1	1/1:17,3:20:22.81:266,23,0	0/1:16,0:16:2:118,0,2	0/0:8,0:8:24.08:0,24,391	0/0:16,0:16:48.06:0,48,699	0/0:16,0:16:39.10:0,39,578	1/1:19,0:19:6.09:227,6,0	1/1:17,0:17:31.83:175,32,0	1/1:13,0:14:32.31:225,32,0	1/1:7,0:7:20.54:128,21,0
chr10	8663046	.	G	GTGGT	21888.87	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-4.330;DP=490;FS=11.082;HRun=0;HaplotypeScore=164.5182;InbreedingCoeff=0.9988;MQ=74.92;MQ0=0;MQRankSum=-9.765;QD=62.18;ReadPosRankSum=0.745;VQSLOD=6.0936;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,21:29:81.25:1943,81,0	1/1:2,7:10:27.09:672,27,0	0/0:23,0:23:60.16:0,60,1075	0/0:23,0:20:51.16:0,51,974	1/1:6,25:32:50.98:1291,51,0	1/1:1,13:16:31.66:821,32,0	1/1:1,14:15:33.11:909,33,0	1/1:1,16:19:54.17:1267,54,0	0/0:11,0:11:27.09:0,27,437	0/0:12,0:12:36.12:0,36,591	0/0:18,0:18:39.11:0,39,615	1/1:5,14:23:53.78:1457,54,0	1/1:4,12:18:48.16:1286,48,0	1/1:3,15:26:75.24:1873,75,0	0/0:13,0:13:33.06:0,33,528	1/1:3,10:17:42.14:1055,42,0	1/1:2,13:15:36.12:899,36,0	1/1:1,10:12:36.12:941,36,0	1/1:0,19:22:61.65:1654,62,0	1/1:5,13:20:45.14:1144,45,0	1/1:5,9:16:36.01:792,36,0	0/0:9,0:9:24.08:0,24,382	0/0:16,0:16:45.13:0,45,665	0/0:13,0:13:36.12:0,36,566	1/1:7,12:22:48.13:1218,48,0	1/1:2,13:16:45.15:1092,45,0	1/1:4,9:15:39.12:963,39,0	1/1:1,7:8:24.08:613,24,0
chr10	8663052	.	GA	G	2841.86	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-9.354;DP=473;FS=6.901;HRun=1;HaplotypeScore=189.4923;InbreedingCoeff=0.9983;MQ=79.48;MQ0=0;MQRankSum=2.764;QD=31.93;ReadPosRankSum=2.469;VQSLOD=2.8834;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:92.02:0,92,762	0/0:10,0:9:26.18:0,26,218	0/0:24,0:24:69.18:0,69,913	0/0:20,0:17:48.12:0,48,638	0/0:31,0:31:71.96:0,72,580	0/0:15,0:15:26.76:0,27,250	0/0:14,0:14:33.03:0,33,321	0/0:18,0:18:50.95:0,51,468	1/1:0,11:11:27.09:374,27,0	1/1:0,13:13:39.12:523,39,0	1/1:1,15:16:33.11:450,33,0	0/0:22,0:22:59.40:0,59,509	0/0:19,0:19:46.01:0,46,411	0/0:25,0:25:71.93:0,72,660	1/1:3,10:13:30.10:392,30,0	0/0:16,0:16:41.50:0,42,369	0/0:13,0:13:35.87:0,36,314	0/0:11,0:11:33.03:0,33,316	0/0:23,0:23:68.13:0,68,652	0/0:17,0:17:47.79:0,48,411	0/0:16,0:16:38.87:0,39,345	1/1:0,10:10:24.08:332,24,0	1/1:1,13:14:39.11:527,39,0	1/1:1,11:12:33.11:444,33,0	0/0:20,0:20:59.11:0,59,501	0/0:15,0:15:44.57:0,45,398	0/0:15,0:15:41.61:0,42,388	0/0:8,0:8:24.01:0,24,230
chr10	8663139	.	AT	A	13685.79	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=18.188;DP=622;FS=6.509;HRun=2;HaplotypeScore=147.7393;InbreedingCoeff=0.9992;MQ=94.56;MQ0=0;MQRankSum=-8.516;QD=33.30;ReadPosRankSum=3.007;VQSLOD=3.9643;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,32:34:81.25:999,81,0	1/1:1,13:14:36.11:438,36,0	0/0:32,0:33:89.51:0,90,1243	0/0:29,0:29:72.24:0,72,1051	1/1:0,21:21:48.12:573,48,0	1/1:3,10:13:30.09:362,30,0	1/1:0,21:21:54.17:663,54,0	1/1:22,0:22:60.12:701,60,0	0/0:15,0:15:42.14:0,42,628	0/0:22,0:22:61.44:0,61,883	0/0:14,0:14:42.10:0,42,603	1/1:0,29:29:84.26:1036,84,0	1/1:0,27:27:78.20:943,78,0	1/1:1,23:24:62.75:770,63,0	0/0:34,0:34:99:0,99,1456	1/1:0,22:22:63.20:770,63,0	1/1:0,24:24:72.23:891,72,0	1/1:0,16:16:42.13:518,42,0	1/1:0,17:16:48.13:580,48,0	1/1:0,25:25:75.24:925,75,0	1/1:2,26:28:75.15:905,75,0	0/0:19,0:19:54.18:0,54,809	0/0:24,0:24:69.22:0,69,1015	0/0:21,0:21:57.19:0,57,854	1/1:0,22:22:63.15:753,63,0	1/1:0,24:24:72.23:890,72,0	1/1:1,20:21:58.73:707,59,0	1/1:0,7:7:21.07:261,21,0
chr10	8663142	.	CT	C	13848.64	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=17.642;DP=615;FS=6.577;HRun=2;HaplotypeScore=146.4416;InbreedingCoeff=0.9992;MQ=92.21;MQ0=0;MQRankSum=-8.188;QD=33.78;ReadPosRankSum=3.090;VQSLOD=3.9099;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:33,0:33:84.17:1005,84,0	1/1:13,0:13:36.11:455,36,0	0/0:29,0:29:75.17:0,75,1224	0/0:28,0:28:74.02:0,74,1095	1/1:22,0:22:51.15:622,51,0	1/1:12,0:12:30.09:372,30,0	1/1:21,0:21:53.04:675,53,0	1/1:0,20:20:57.15:683,57,0	0/0:16,0:16:45.15:0,45,717	0/0:20,0:20:58.44:0,58,915	0/0:14,0:14:39.13:0,39,621	1/1:29,0:29:84.26:1032,84,0	1/1:27,0:27:78.19:955,78,0	1/1:23,0:23:62.66:769,63,0	0/0:34,0:34:99:0,99,1579	1/1:22,0:22:62.07:792,62,0	1/1:24,0:24:72.23:887,72,0	1/1:17,0:17:45.10:542,45,0	1/1:16,0:15:45.14:555,45,0	1/1:25,0:25:75.23:917,75,0	1/1:27,0:27:75.22:924,75,0	0/0:19,0:19:54.18:0,54,863	0/0:24,0:24:69.23:0,69,1103	0/0:21,0:21:57.19:0,57,911	1/1:22,0:22:60.19:751,60,0	1/1:28,0:28:74.72:914,75,0	1/1:21,1:22:63.18:766,63,0	1/1:7,0:7:20.96:233,21,0
chr10	8664403	.	CT	C	7404.18	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=4.429;DP=612;FS=2.298;HRun=1;HaplotypeScore=80.4268;InbreedingCoeff=0.9999;MQ=74.86;MQ0=0;MQRankSum=-3.189;QD=36.12;ReadPosRankSum=3.133;VQSLOD=5.3209;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,21:21:42.14:574,42,0	1/1:0,11:11:33.11:460,33,0	0/0:17,1:15:41.37:0,41,556	0/0:25,0:23:55.45:0,55,823	1/1:1,25:26:65.99:852,66,0	1/1:0,28:28:78.26:1089,78,0	1/1:0,28:28:75.25:1046,75,0	0/0:22,0:22:66.23:0,66,1055	0/0:20,0:20:60.20:0,60,954	0/0:24,0:24:72.24:0,72,1133	0/0:19,0:19:48.16:0,48,764	0/0:15,0:15:45.15:0,45,717	0/0:15,0:15:45.14:0,45,694	0/0:18,0:18:54.16:0,54,817	0/0:32,0:32:96.30:0,96,1488	1/1:0,19:19:51.17:712,51,0	1/1:0,28:28:81.27:1129,81,0	1/1:0,22:22:57.19:794,57,0	0/0:29,0:29:84.27:0,84,1300	0/0:21,0:21:63.21:0,63,1004	0/0:20,0:20:54.17:0,54,840	0/0:17,0:17:51.15:0,51,770	0/0:17,0:17:51.17:0,51,815	0/0:25,0:25:69.21:0,69,1077	1/1:0,22:22:54.18:748,54,0	0/0:27,0:27:81.25:0,81,1246	0/0:25,0:25:75.21:0,75,1128	0/0:18,0:18:54.18:0,54,862
chr10	8665498	.	C	CT	4002.50	PASS	AB=0.588;AC=17;AF=0.304;AN=56;BaseQRankSum=-12.901;DP=585;FS=2.702;HRun=10;HaplotypeScore=74.8899;InbreedingCoeff=0.8890;MQ=82.02;MQ0=0;MQRankSum=-1.753;QD=20.53;ReadPosRankSum=1.840;VQSLOD=4.7400;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,12:17:32.03:332,32,0	1/1:3,9:12:5.43:263,5,0	0/0:22,0:22:38.67:0,39,266	0/0:18,0:18:21.66:0,22,138	1/1:6,25:32:68.87:679,69,0	1/1:3,20:23:51.13:544,51,0	1/1:2,8:11:23.89:238,24,0	0/0:31,0:31:62.78:0,63,499	0/0:2,0:20:32.59:0,33,94	0/0:4,0:18:28.51:0,29,82	0/0:4,0:21:32.58:0,33,94	0/0:25,0:25:65.87:0,66,536	0/0:26,0:26:65.85:0,66,531	0/0:14,0:14:41.95:0,42,345	0/0:4,0:22:32.58:0,33,94	1/1:4,23:28:62.97:654,63,0	0/1:9,21:30:10.62:510,0,11	1/1:2,6:8:18.01:177,18,0	0/0:15,1:16:15.94:0,16,333	0/0:22,0:23:46.90:0,47,369	0/0:23,0:23:53.87:0,54,438	0/0:4,0:19:30.54:0,31,89	0/0:2,0:17:30.55:0,31,88	0/0:2,0:9:10.18:0,10,29	1/1:6,27:34:19.75:605,20,0	0/0:23,0:23:47.90:0,48,391	0/0:30,0:32:87.91:0,88,694	0/0:11,0:11:17.97:0,18,148
chr10	8665830	.	T	TC	7179.48	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-9.826;DP=716;FS=6.987;HRun=7;HaplotypeScore=116.6784;InbreedingCoeff=0.9932;MQ=88.69;MQ0=0;MQRankSum=-1.405;QD=29.42;ReadPosRankSum=2.583;VQSLOD=3.7637;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,36:39:96.28:1149,96,0	1/1:1,9:10:27.08:326,27,0	0/0:29,0:29:67.68:0,68,606	0/0:26,0:26:10.63:0,11,391	1/1:5,31:36:84.22:998,84,0	1/1:3,22:25:66.20:796,66,0	1/1:6,16:22:45.14:543,45,0	0/0:39,0:39:96.13:0,96,923	0/0:26,0:26:66.10:0,66,637	0/0:26,0:26:69.10:0,69,666	0/0:22,0:22:60.08:0,60,575	0/0:18,0:18:51.08:0,51,492	0/0:31,0:31:78.12:0,78,753	0/0:24,0:24:66.10:0,66,637	0/0:46,0:46:99:0,126,1205	1/1:6,19:25:28.20:623,28,0	1/1:4,26:30:78.24:942,78,0	1/1:2,29:31:84.22:998,84,0	0/0:20,0:20:54.08:0,54,521	0/0:22,0:22:51.05:0,51,481	0/0:18,0:18:54.08:0,54,516	0/0:26,0:26:72.07:0,72,685	0/0:14,0:14:39.06:0,39,376	0/0:23,0:23:57.07:0,57,544	1/1:3,23:26:43.28:804,43,0	0/0:20,0:20:54.09:0,54,520	0/0:31,0:31:87.14:0,87,839	0/0:11,0:11:33.05:0,33,319
chr10	8667156	.	GTGTGTGTGTGTGTGTGTGTA	G	1019.27	PASS	AB=0.973;AC=35;AF=0.700;AN=50;BaseQRankSum=-6.682;DP=547;FS=0.621;HRun=0;HaplotypeScore=234.9894;InbreedingCoeff=0.0041;MQ=50.74;MQ0=33;MQRankSum=1.857;QD=2.23;ReadPosRankSum=1.668;VQSLOD=2.5886;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:34,0:32:21.31:167,21,0	./.	./.	./.	1/1:19,0:15:8.55:44,9,0	1/1:22,0:20:4.80:31,5,0	1/1:19,0:16:11.33:88,11,0	0/1:29,0:29:45.39:45,0,104	0/1:21,0:20:14.18:14,0,186	1/1:13,0:11:9.88:63,10,0	1/1:11,0:10:5.77:36,6,0	0/1:19,0:18:13.39:13,0,552	0/1:20,0:20:24.05:24,0,516	0/1:22,0:21:14.83:15,0,1187	1/1:16,0:16:9.02:65,9,0	1/1:18,0:18:13.63:73,14,0	1/1:20,0:18:6.04:50,6,0	0/1:22,0:19:30.62:63,0,31	0/1:18,0:17:19.34:19,0,495	0/1:14,0:13:40.29:40,0,148	1/1:28,0:25:0.24:20,0,0	1/1:11,0:11:13.84:168,14,0	0/1:8,6:12:0:0,0,0	1/1:23,0:22:9.86:121,10,0	0/1:14,0:14:0.11:3,0,0	0/1:30,0:30:3.98:4,0,1636	0/0:21,0:21:10.48:0,10,523	0/0:10,0:9:21.22:0,21,741
chr10	8667174	.	GTA	G	5509.02	PASS	AB=0.913;AC=49;AF=0.942;AN=52;BaseQRankSum=-2.490;DP=518;FS=0.000;HRun=0;HaplotypeScore=104.6717;InbreedingCoeff=-0.0815;MQ=45.08;MQ0=32;MQRankSum=6.289;QD=10.84;ReadPosRankSum=0.104;VQSLOD=4.1979;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:38,0:36:65.39:530,65,0	1/1:5,0:4:11.97:95,12,0	./.	./.	1/1:20,0:16:35.45:286,35,0	1/1:22,0:21:12.78:116,13,0	1/1:30,0:26:34.22:291,34,0	0/1:27,0:26:99:101,0,127	1/1:19,0:18:31.01:228,31,0	1/1:13,0:11:28.09:219,28,0	1/1:9,0:9:14.97:123,15,0	1/1:17,0:16:30.37:223,30,0	1/1:23,0:22:36.30:254,36,0	1/1:22,1:22:3.59:219,4,0	1/1:23,0:23:34.51:289,35,0	1/1:20,0:20:33.76:327,34,0	1/1:22,0:19:19.95:185,20,0	1/1:28,1:26:71.22:540,71,0	0/1:11,6:15:32.34:79,0,32	1/1:12,0:11:8.96:69,9,0	1/1:30,0:27:20.75:152,21,0	1/1:11,0:11:20.44:165,20,0	1/1:11,0:9:2.34:24,2,0	1/1:25,0:24:29.61:241,30,0	1/1:13,0:13:22.05:173,22,0	0/1:25,0:25:36.38:251,0,36	1/1:14,0:14:21.11:141,21,0	1/1:10,0:9:25.12:187,25,0
chr10	8667176	.	A	ATG	1158.12	PASS	AB=0.936;AC=39;AF=0.780;AN=50;BaseQRankSum=-2.565;DP=514;FS=0.000;HRun=0;HaplotypeScore=120.1492;InbreedingCoeff=0.0949;MQ=45.51;MQ0=31;MQRankSum=0.666;QD=2.50;ReadPosRankSum=-0.790;VQSLOD=2.2562;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:39,0:37:2.86:7,3,0	0/0:5,0:4:0.86:0,1,2	0/1:2,0:1:0:0,0,0	./.	1/1:20,0:17:2.47:22,2,0	1/1:21,0:20:1.60:21,2,0	1/1:33,0:29:2.75:24,3,0	1/1:26,0:25:13.38:106,13,0	1/1:19,0:18:5.46:47,5,0	./.	0/1:9,0:9:0:0,0,0	1/1:15,1:16:0.24:35,0,0	1/1:22,1:22:14.63:160,15,0	0/1:21,1:22:9.63:260,0,10	1/1:23,0:23:2.15:10,2,0	1/1:19,0:19:0.47:1,0,0	0/1:21,0:18:0:0,0,0	1/1:29,0:26:5.59:27,6,0	0/1:13,1:12:14.73:62,0,15	1/1:8,0:7:3:45,3,0	1/1:32,0:29:13.53:147,14,0	1/1:11,0:11:2:6,2,0	./.	1/1:26,0:25:0.64:2,1,0	0/0:14,0:14:1.99:0,2,23	0/1:12,13:25:35.48:219,0,35	1/1:14,0:14:3.55:51,4,0	0/1:9,0:8:3.05:10,0,3
chr10	8667960	.	CTT	C	2775.03	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=10.749;DP=539;FS=4.989;HRun=2;HaplotypeScore=89.1030;InbreedingCoeff=0.9473;MQ=75.52;MQ0=1;MQRankSum=-1.624;QD=17.79;ReadPosRankSum=7.166;VQSLOD=1.2303;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:29.77:0,30,402	0/0:8,0:8:24.08:0,24,335	0/0:26,0:25:53.46:0,53,1049	0/0:32,0:28:58.14:0,58,1008	0/0:13,0:13:30.57:0,31,511	0/0:20,0:20:13.67:0,14,439	0/0:23,0:23:60.53:0,61,956	0/0:15,0:15:42.10:0,42,672	1/1:22,0:21:50.91:439,51,0	1/1:19,0:19:45.59:344,46,0	1/1:25,1:26:51.82:471,52,0	0/0:32,0:32:96.15:0,96,1622	0/0:25,0:25:75.24:0,75,1307	0/0:19,0:19:57.17:0,57,942	1/1:23,3:26:37.96:548,38,0	0/0:16,0:16:29.25:0,29,345	0/0:25,0:25:11.44:0,11,638	0/0:11,0:11:24.05:0,24,307	0/0:6,0:6:17.32:0,17,184	0/0:14,0:14:33.11:0,33,560	0/0:15,0:15:45.12:0,45,731	1/1:18,0:18:19.70:340,20,0	1/1:11,0:11:29.91:247,30,0	1/1:34,0:34:70.54:582,71,0	0/0:13,0:13:10.10:0,10,263	0/0:22,0:23:3.72:0,4,858	0/0:18,0:18:51.17:0,51,875	0/0:5,0:5:15.05:0,15,255
chr10	8667961	.	TTC	T	5793.48	PASS	AB=0.857;AC=15;AF=0.268;AN=56;BaseQRankSum=4.755;DP=531;FS=4.266;HRun=0;HaplotypeScore=78.9474;InbreedingCoeff=0.9031;MQ=75.84;MQ0=1;MQRankSum=0.449;QD=32.73;ReadPosRankSum=7.167;VQSLOD=6.8082;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:35.24:0,35,418	0/0:8,0:8:24.07:0,24,355	0/0:26,0:25:64.89:0,65,1063	0/0:31,0:28:64.45:0,64,874	0/0:13,0:13:30.51:0,31,372	0/0:20,0:20:29.29:0,29,371	0/0:23,0:23:57.17:0,57,996	0/0:15,0:15:42:0,42,527	1/1:0,22:21:51.17:823,51,0	1/1:0,19:19:57.10:790,57,0	1/1:1,25:26:57.08:840,57,0	0/0:33,0:33:99:0,99,1701	0/0:24,0:24:72.25:0,72,1425	0/0:17,0:17:51.11:0,51,917	1/1:3,22:25:60.20:954,60,0	0/0:16,0:16:30.08:0,30,388	0/0:24,0:24:49.83:0,50,671	0/0:11,0:11:24.06:0,24,315	0/0:6,0:6:18.06:0,18,292	0/0:13,0:13:33.07:0,33,539	0/0:15,0:15:45.09:0,45,732	1/1:0,16:16:41.95:677,42,0	1/1:0,11:11:30.10:484,30,0	1/1:1,33:34:72.66:1129,73,0	0/0:13,0:13:20.53:0,21,233	0/1:20,4:24:96.90:97,0,958	0/0:18,0:18:51.09:0,51,904	0/0:5,0:5:15.01:0,15,260
chr10	8667962	.	T	TC	1041.84	PASS	AB=0.842;AC=19;AF=0.339;AN=56;BaseQRankSum=-6.583;DP=528;FS=12.375;HRun=10;HaplotypeScore=92.5468;InbreedingCoeff=0.3403;MQ=76.60;MQ0=1;MQRankSum=-1.859;QD=4.87;ReadPosRankSum=-4.959;VQSLOD=-0.6333;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:8,16:24:1.23:195,1,0	1/1:7,1:8:17.99:160,18,0	0/0:27,0:26:26.85:0,27,268	0/1:28,1:26:28.62:29,0,151	1/1:12,1:13:0.47:1,0,0	1/1:7,12:20:9.91:97,10,0	0/1:19,4:23:54.08:54,0,226	0/0:14,0:14:8.92:0,9,72	0/0:22,0:21:37.56:0,38,114	0/0:19,0:19:6.41:0,6,64	0/0:26,0:26:35.38:0,35,107	0/0:31,0:33:78.95:0,79,624	0/0:24,0:24:59.86:0,60,490	0/0:16,0:16:35.93:0,36,296	0/0:25,0:25:43.57:0,44,132	0/1:4,12:16:18.42:169,0,18	0/1:10,13:23:13.41:264,0,13	1/1:4,7:11:10.57:126,11,0	0/1:6,0:6:14.06:14,0,98	0/1:12,1:13:8.01:8,0,148	0/1:14,1:15:2.06:2,0,188	0/0:16,0:16:30.72:0,31,93	0/0:11,0:11:22.02:0,22,67	0/0:34,0:34:49.19:0,49,151	1/1:4,9:13:8.62:94,9,0	0/0:24,0:24:54.53:0,55,413	0/0:17,0:18:40.91:0,41,326	0/0:5,0:5:8.97:0,9,74
chr10	8670488	.	T	TGGGGTGTGGGAGGAG	2730.64	PASS	AB=0.792;AC=42;AF=0.955;AN=44;BaseQRankSum=-2.468;DP=63;FS=6.335;HRun=0;HaplotypeScore=27.8817;InbreedingCoeff=-0.1869;MQ=115.36;MQ0=0;MQRankSum=-2.607;QD=45.51;ReadPosRankSum=-2.049;VQSLOD=1.0148;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:4:6:72,6,0	1/1:3,0:3:9.02:197,9,0	0/1:4,0:5:35.33:279,0,35	0/1:4,1:6:10.32:460,0,10	1/1:2,0:2:3.01:75,3,0	./.	1/1:2,0:2:3.01:52,3,0	1/1:3,0:3:9:102,9,0	1/1:2,0:2:6.02:131,6,0	1/1:5,0:5:15.03:246,15,0	1/1:2,0:2:6:102,6,0	./.	1/1:3,0:3:6.02:130,6,0	1/1:4,0:5:6.02:171,6,0	1/1:2,0:2:3.01:51,3,0	1/1:4,0:4:9.03:221,9,0	./.	1/1:1,0:1:3.01:58,3,0	1/1:1,0:1:3.01:77,3,0	1/1:1,0:1:3:25,3,0	1/1:2,0:2:3.01:75,3,0	1/1:2,0:2:3.01:77,3,0	1/1:2,0:2:3.01:73,3,0	./.	./.	1/1:2,0:2:3.01:75,3,0	1/1:1,0:1:3.01:75,3,0	./.
chr10	8672238	.	AAC	A	2549.90	PASS	AB=0.981;AC=19;AF=0.339;AN=56;BaseQRankSum=-2.709;DP=698;FS=7.016;HRun=0;HaplotypeScore=207.9966;InbreedingCoeff=0.5429;MQ=64.69;MQ0=25;MQRankSum=1.115;QD=8.28;ReadPosRankSum=3.543;VQSLOD=2.3961;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:30:3.19:3,0,20	0/0:7,0:5:1.55:0,2,4	0/1:54,1:32:16.31:16,0,164	0/0:58,0:39:33.01:0,33,402	0/0:22,0:21:3.41:0,3,34	0/0:23,0:23:1.72:0,2,8	0/0:24,0:19:2.68:0,3,37	1/1:25,3:29:2.61:256,3,0	0/0:20,0:25:29.99:0,30,260	0/0:12,0:11:10.67:0,11,81	0/0:17,0:15:11.65:0,12,89	1/1:14,13:27:54.11:602,54,0	1/1:18,12:31:21.61:466,22,0	1/1:16,3:20:23.29:270,23,0	0/0:32,0:32:6.85:0,7,20	0/0:23,0:24:12.63:0,13,87	0/0:23,0:23:8.10:0,8,48	0/0:10,0:7:0:0,0,0	1/1:12,7:18:8.20:286,8,0	1/1:19,7:27:29.73:322,30,0	0/1:23,1:22:0.01:0,0,0	0/0:19,0:20:12.31:0,12,59	0/0:14,0:16:2.83:0,3,10	0/0:29,0:30:10.78:0,11,54	0/0:31,0:28:6.67:0,7,42	1/1:12,8:19:7.54:281,8,0	1/1:17,6:23:1.01:215,1,0	0/0:9,0:8:6.35:0,6,31
chr10	8672252	.	C	CCACACAAAT	3029.24	PASS	AB=0.980;AC=24;AF=0.429;AN=56;BaseQRankSum=8.055;DP=768;FS=14.191;HRun=0;HaplotypeScore=297.2138;InbreedingCoeff=-0.6038;MQ=40.90;MQ0=46;MQRankSum=-9.977;QD=5.23;ReadPosRankSum=-4.142;VQSLOD=0.1191;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:30:28.85:29,0,535	1/1:9,0:7:7.71:33,8,0	0/0:67,0:19:57.12:0,57,1214	0/0:74,0:28:81.27:0,81,1790	0/1:22,0:21:43.51:44,0,274	0/1:23,0:23:99:161,0,206	0/1:22,0:17:72.10:72,0,318	0/1:46,0:46:99:688,0,1526	0/0:22,0:21:42.42:0,42,474	0/0:18,0:17:11.15:0,11,616	0/1:17,0:13:1.39:1,0,208	0/1:27,0:28:5.34:5,0,1307	0/1:31,1:34:99:184,0,1107	0/1:17,3:24:73.94:74,0,804	0/1:32,0:32:99:196,0,196	0/1:25,0:23:99:330,0,319	0/1:21,0:20:63.82:64,0,408	0/0:7,0:5:3.01:0,3,73	0/1:24,0:23:99:140,0,1222	0/1:30,0:30:99:121,0,885	0/1:27,0:21:64.68:65,0,76	0/1:21,0:21:99:185,0,161	0/1:17,0:16:99:110,0,136	0/1:28,0:26:34.11:34,0,307	0/1:34,0:31:39.46:39,0,192	0/1:26,0:24:99:229,0,1037	0/1:24,2:28:99:221,0,760	0/1:8,0:7:99:161,0,133
chr10	8672267	.	AC	A	3444.52	PASS	AB=0.848;AC=25;AF=0.446;AN=56;BaseQRankSum=7.022;DP=748;FS=2.235;HRun=2;HaplotypeScore=222.6642;InbreedingCoeff=-0.2917;MQ=31.13;MQ0=57;MQRankSum=-1.346;QD=6.88;ReadPosRankSum=-1.706;VQSLOD=0.1530;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:23,1:22:61.36:61,0,93	0/1:9,2:9:39.17:81,0,39	0/0:67,2:9:16.53:0,17,251	0/0:73,0:14:39.11:0,39,476	1/1:11,8:18:13.89:151,14,0	0/1:20,5:25:83.97:310,0,84	0/1:21,3:20:56.22:56,0,164	0/0:45,1:46:83.62:0,84,1310	0/1:21,2:22:19.07:19,0,206	0/1:14,5:16:83.03:83,0,292	0/1:14,1:12:2.15:24,0,2	0/1:23,6:28:93.65:94,0,126	0/1:28,7:34:99:183,0,240	0/1:20,2:22:65.21:100,0,65	0/1:23,5:31:51.26:254,0,51	0/1:20,4:21:21.57:332,0,22	0/1:14,5:18:97.15:167,0,97	0/0:7,0:5:1.82:0,2,5	0/0:23,0:22:11.08:0,11,352	0/1:23,7:30:99:135,0,119	0/0:24,1:18:5.43:0,5,53	1/1:16,4:20:19.71:264,20,0	1/1:16,1:16:3.89:99,4,0	1/1:17,7:22:19.61:199,20,0	0/1:22,11:30:64.84:319,0,65	0/1:22,5:24:99:144,0,326	0/1:19,8:27:99:369,0,158	0/0:3,1:3:1.43:0,1,78
chr10	8672268	.	C	CA	4236.61	PASS	AB=0.933;AC=27;AF=0.482;AN=56;BaseQRankSum=7.168;DP=761;FS=6.526;HRun=1;HaplotypeScore=235.6638;InbreedingCoeff=-0.3169;MQ=30.96;MQ0=57;MQRankSum=-0.564;QD=7.89;ReadPosRankSum=-2.642;VQSLOD=0.8786;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:19,5:22:58.65:59,0,104	0/1:10,1:9:39.84:82,0,40	0/0:69,0:9:16.36:0,16,259	0/0:72,0:13:39.10:0,39,453	1/1:18,2:19:13.29:142,13,0	0/1:22,3:25:84.95:326,0,85	0/1:22,1:19:99:120,0,167	0/0:49,0:49:2.27:0,2,1262	0/1:18,5:22:71.12:79,0,71	0/1:18,0:15:83.62:84,0,285	1/1:12,3:12:9.93:72,10,0	0/1:29,0:28:84.08:84,0,323	0/1:36,0:35:99:215,0,399	0/1:23,0:23:99:120,0,146	0/1:26,4:30:38.75:300,0,39	0/1:18,6:21:15.68:366,0,16	0/1:18,2:20:99:190,0,137	0/0:3,4:5:0:0,0,0	0/1:25,0:24:52.34:52,0,403	0/1:34,0:34:99:252,0,223	0/0:22,1:16:5.44:0,5,64	1/1:17,3:20:25.31:327,25,0	1/1:15,2:16:10.17:122,10,0	1/1:22,5:24:25.19:278,25,0	0/1:31,2:30:71.30:356,0,71	0/1:29,0:25:99:145,0,422	0/1:28,1:29:99:466,0,240	0/0:3,0:3:4.42:0,4,75
chr10	8672273	.	CAAAT	C	2552.79	PASS	AB=0.984;AC=24;AF=0.429;AN=56;BaseQRankSum=2.609;DP=764;FS=0.380;HRun=0;HaplotypeScore=251.7958;InbreedingCoeff=-0.6490;MQ=30.99;MQ0=55;MQRankSum=0.164;QD=4.67;ReadPosRankSum=-1.818;VQSLOD=1.7496;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:26:34.88:35,0,277	0/1:12,0:10:8.45:8,0,140	0/0:70,1:11:4.30:0,4,248	0/0:67,0:8:22.84:0,23,253	0/1:18,1:19:61.80:79,0,62	0/1:24,0:24:99:136,0,201	0/1:25,0:21:16.98:17,0,335	0/0:46,0:46:9.87:0,10,1655	0/0:21,0:21:0.42:0,0,383	0/1:22,0:20:99:138,0,378	0/1:12,0:11:21.69:22,0,40	0/1:29,0:28:99:137,0,528	0/1:37,0:36:99:151,0,634	0/1:22,0:22:99:150,0,198	0/1:29,0:29:55.37:193,0,55	0/1:25,1:23:99:162,0,168	0/1:15,2:16:99:119,0,128	0/0:8,0:6:6.83:0,7,44	0/1:22,0:21:48.16:48,0,618	0/1:38,0:38:99:202,0,283	0/1:25,0:17:31.69:32,0,65	0/1:19,0:19:10.84:160,0,11	0/1:16,0:15:17.22:74,0,17	1/1:26,0:24:14.06:118,14,0	0/1:32,0:29:99:186,0,255	0/1:29,0:25:99:163,0,755	0/1:32,0:32:99:337,0,335	0/1:4,0:4:42.32:42,0,131
chr10	8672275	.	A	AATACAC	6302.12	PASS	AB=0.929;AC=25;AF=0.463;AN=54;BaseQRankSum=-4.319;DP=750;FS=6.333;HRun=0;HaplotypeScore=268.0757;InbreedingCoeff=-0.5380;MQ=31.44;MQ0=56;MQRankSum=-0.366;QD=11.13;ReadPosRankSum=-1.645;VQSLOD=3.0665;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:26,1:25:71.22:280,0,71	0/1:6,5:9:37.93:269,0,38	0/0:71,0:11:11.07:0,11,106	0/0:67,0:8:17.06:0,17,141	0/1:14,4:21:28.73:143,0,29	0/1:19,4:23:27.13:350,0,27	0/1:19,7:23:66.99:442,0,67	0/1:45,0:45:99:544,0,189	0/0:21,0:20:26.11:0,26,176	0/1:23,0:21:99:114,0,157	./.	0/1:30,0:29:99:159,0,191	0/1:37,0:36:99:382,0,233	0/1:22,0:22:99:177,0,107	0/1:29,0:29:25.61:62,0,26	0/1:22,3:23:53.49:559,0,53	0/1:13,2:14:1.98:307,0,2	1/1:9,0:7:11.96:166,12,0	0/1:21,1:21:99:332,0,151	0/1:37,0:37:84.02:528,0,84	0/1:24,0:16:13.65:20,0,14	0/1:18,0:18:31.77:37,0,32	0/0:16,0:15:6.28:0,6,24	0/1:20,0:18:4.70:27,0,5	0/1:24,7:30:99:503,0,141	0/1:29,0:25:99:276,0,112	0/1:32,0:32:81.01:558,0,81	1/1:5,0:4:10.71:66,11,0
chr10	8672277	.	T	TACACATACACAC	9640.45	PASS	AB=0.952;AC=29;AF=0.518;AN=56;BaseQRankSum=-7.358;DP=774;FS=12.716;HRun=0;HaplotypeScore=318.7685;InbreedingCoeff=-0.5936;MQ=32.87;MQ0=54;MQRankSum=0.230;QD=13.91;ReadPosRankSum=0.182;VQSLOD=2.1427;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:26:18.31:218,0,18	0/1:11,0:9:20.26:112,0,20	0/1:69,0:12:1.86:2,0,88	0/0:65,0:7:17.05:0,17,136	0/1:23,0:23:10.56:48,0,11	0/1:23,0:23:11.27:109,0,11	0/1:27,0:23:63.43:190,0,63	0/1:43,0:43:99:1036,0,189	0/1:22,0:21:62.79:63,0,142	0/1:24,0:22:99:219,0,140	0/1:5,0:11:0:1,0,0	0/1:29,0:28:99:577,0,188	0/1:38,2:39:99:1144,0,230	0/1:22,1:23:89.80:615,0,90	0/1:26,0:34:17.24:159,0,17	0/1:27,0:24:66.48:166,0,66	0/1:17,0:15:5.93:141,0,6	1/1:8,0:6:5.21:48,5,0	0/1:23,0:23:99:713,0,141	0/1:36,0:38:69.45:1188,0,69	0/1:25,0:17:13.54:44,0,14	0/1:16,0:24:31.17:47,0,31	0/0:10,0:16:5.13:0,5,22	1/1:22,0:19:5.38:102,5,0	0/1:33,0:30:98.48:209,0,98	0/1:29,0:26:99:681,0,103	0/1:29,3:33:79.71:1683,0,80	1/1:5,0:4:11.92:126,12,0
chr10	8673436	.	A	ACT	26521.82	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-9.514;DP=717;FS=8.802;HRun=0;HaplotypeScore=70.5300;InbreedingCoeff=0.9700;MQ=83.40;MQ0=5;MQRankSum=-10.122;QD=40.00;ReadPosRankSum=7.635;VQSLOD=6.4146;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:2,21:23:57.20:977,57,0	1/1:1,15:16:45.15:771,45,0	0/0:29,0:29:63.15:0,63,808	0/0:25,0:25:33.56:0,34,632	1/1:5,35:40:83.76:1439,84,0	1/1:3,23:26:57.20:977,57,0	1/1:2,13:15:36.12:618,36,0	1/1:6,31:37:93.30:1551,93,0	1/1:1,24:25:63.22:1080,63,0	1/1:3,19:24:60.21:1025,60,0	1/1:3,22:25:60.21:1021,60,0	1/1:2,21:25:63.22:1080,63,0	1/1:7,27:34:69.24:1183,69,0	1/1:4,33:37:96.33:1645,96,0	1/1:2,26:27:66.23:1132,66,0	1/1:1,21:22:60.21:1029,60,0	1/1:2,19:21:51.17:875,51,0	1/1:4,19:23:45.15:771,45,0	1/1:2,27:29:81.25:1325,81,0	1/1:3,25:28:72.25:1232,72,0	1/1:2,12:14:33.11:566,33,0	1/1:4,25:29:63.22:1080,63,0	1/1:4,22:27:66.23:1132,66,0	1/1:3,23:24:54.18:926,54,0	1/1:3,13:16:27.09:463,27,0	1/1:2,22:24:66.20:1079,66,0	1/1:6,30:37:81.28:1389,81,0	1/1:5,4:9:9.03:154,9,0
chr10	8675251	.	AAAC	A	6199.62	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-5.763;DP=723;FS=4.173;HRun=0;HaplotypeScore=122.2870;InbreedingCoeff=0.9987;MQ=63.85;MQ0=3;MQRankSum=1.389;QD=30.39;ReadPosRankSum=5.018;VQSLOD=5.2477;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,30:36:24.57:845,25,0	1/1:2,10:12:30.06:437,30,0	0/0:47,0:30:72.07:0,72,1245	0/0:35,0:26:63.48:0,63,922	1/1:1,24:25:63.21:970,63,0	1/1:2,18:20:36.12:557,36,0	1/1:0,24:24:39.13:602,39,0	0/0:33,0:32:25.11:0,25,921	0/0:28,0:28:63.21:0,63,1154	0/0:33,0:33:90.30:0,90,1672	0/0:31,0:31:78.27:0,78,1632	0/0:24,0:24:44.27:0,44,921	0/0:20,0:20:31.18:0,31,661	0/0:20,0:20:45.15:0,45,670	0/0:25,0:25:72.25:0,72,1465	1/1:2,17:19:42.14:650,42,0	1/1:6,23:30:25.16:887,25,0	1/1:2,15:17:36.12:557,36,0	0/0:18,0:18:24.22:0,24,628	0/0:31,0:31:79.06:0,79,1101	0/0:26,0:26:72.24:0,72,1015	0/0:24,0:24:66.22:0,66,956	0/0:19,0:19:45.15:0,45,924	0/0:29,0:29:72.25:0,72,1484	1/1:1,20:21:45.15:695,45,0	0/0:29,0:29:75.25:0,75,1086	0/0:30,0:29:53.30:0,53,1073	0/0:17,0:17:47.59:0,48,697
chr10	8676740	.	A	AC	3548	PASS	AB=0.696;AC=19;AF=0.339;AN=56;BaseQRankSum=-7.954;DP=634;FS=4.693;HRun=9;HaplotypeScore=69.5677;InbreedingCoeff=0.5108;MQ=80.62;MQ0=0;MQRankSum=-0.188;QD=13.04;ReadPosRankSum=-0.645;VQSLOD=3.3497;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,102,876	0/0:7,0:7:17.24:0,17,124	0/0:24,0:23:38.72:0,39,327	0/1:17,0:17:12.37:12,0,173	0/0:18,0:18:50.98:0,51,442	0/0:23,0:23:47.96:0,48,412	0/0:20,0:21:44.02:0,44,371	1/1:11,13:24:21.04:223,21,0	0/1:7,20:27:3.98:416,0,4	0/0:22,0:23:53:0,53,442	0/0:15,1:16:14.16:0,14,241	1/1:5,1:17:18.15:106,18,0	0/1:6,11:17:5:178,0,5	1/1:5,21:26:7.03:306,7,0	0/0:36,0:36:92.96:0,93,807	0/0:32,0:32:74.93:0,75,651	0/0:28,0:28:62.94:0,63,543	0/0:22,0:22:56.94:0,57,488	0/1:11,3:14:37.07:84,0,37	0/1:8,9:18:5.02:178,0,5	0/1:11,24:35:8.97:594,0,9	1/1:3,21:24:36.06:395,36,0	0/0:16,0:16:29.99:0,30,267	0/0:30,0:30:80.98:0,81,703	0/0:21,1:22:26.78:0,27,459	0/1:10,13:24:9.99:346,0,10	1/1:4,20:24:31.10:571,31,0	1/1:2,3:5:14.94:137,15,0
chr10	8677360	.	GA	G	7649.58	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=11.963;DP=634;FS=12.478;HRun=2;HaplotypeScore=61.7988;InbreedingCoeff=0.9981;MQ=82.86;MQ0=0;MQRankSum=-1.990;QD=35.41;ReadPosRankSum=3.906;VQSLOD=4.4203;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,35:37:99:1306,102,0	1/1:0,7:7:21.07:273,21,0	0/0:15,0:15:39.13:0,39,584	0/0:19,0:20:49.05:0,49,736	1/1:0,28:28:75.18:952,75,0	1/1:0,27:27:78.25:1012,78,0	1/1:0,26:26:72.23:934,72,0	0/0:36,0:36:99:0,102,1456	0/0:21,0:21:63.21:0,63,944	0/0:29,0:29:84.12:0,84,1156	0/0:14,0:14:39.08:0,39,542	0/0:24,0:24:72.24:0,72,1079	0/0:35,0:35:99:0,105,1505	0/0:23,0:23:66.22:0,66,989	0/0:31,0:31:93.28:0,93,1335	1/1:1,29:30:87.26:1113,87,0	1/1:0,19:19:51.17:662,51,0	1/1:0,22:22:57.18:737,57,0	0/0:16,0:16:48.16:0,48,714	0/0:15,0:15:42.14:0,42,628	0/0:28,0:28:81.25:0,81,1171	0/0:19,0:19:57.19:0,57,854	0/0:17,0:17:51.16:0,51,746	0/0:12,0:12:36.11:0,36,519	1/1:1,19:20:51.17:662,51,0	0/0:21,0:21:54.14:0,54,749	0/0:36,0:36:99:0,108,1595	0/0:6,0:6:18.05:0,18,250
chr10	8678215	.	GA	G	2092.28	PASS	AB=0.923;AC=11;AF=0.196;AN=56;BaseQRankSum=9.602;DP=573;FS=3.160;HRun=10;HaplotypeScore=59.4517;InbreedingCoeff=0.8420;MQ=71.72;MQ0=1;MQRankSum=0.579;QD=17.15;ReadPosRankSum=-0.064;VQSLOD=4.1176;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:87.20:0,87,943	0/0:8,0:8:9.02:0,9,100	0/1:11,1:10:32.80:33,0,67	0/0:15,0:13:11.26:0,11,98	0/0:25,0:25:63.16:0,63,690	0/0:15,0:16:44.95:0,45,478	0/0:17,0:17:45.12:0,45,498	0/0:29,0:29:63.14:0,63,675	0/0:24,0:24:57.14:0,57,622	1/1:3,17:20:50.99:443,51,0	1/1:2,26:28:74.96:651,75,0	0/0:27,0:27:63.16:0,63,689	0/0:29,0:29:81.22:0,81,895	0/0:18,0:18:45.07:0,45,476	1/1:5,14:19:5.80:279,6,0	0/0:16,0:16:33.09:0,33,365	0/0:22,0:22:54.15:0,54,597	0/0:14,0:14:36.04:0,36,375	0/0:22,0:22:51.11:0,51,546	0/0:23,0:23:69.19:0,69,763	0/0:15,0:15:33.09:0,33,365	0/0:19,0:19:45.10:0,45,482	1/1:6,20:26:56.98:495,57,0	1/1:1,16:17:41.99:365,42,0	0/0:22,1:23:43.13:0,43,704	0/0:18,0:20:44.95:0,45,479	0/0:26,1:27:49.12:0,49,758	0/0:9,0:9:24.05:0,24,257
chr10	8678807	.	TG	T	5475.71	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=8.616;DP=693;FS=6.403;HRun=1;HaplotypeScore=79.4795;InbreedingCoeff=0.9966;MQ=85.67;MQ0=0;MQRankSum=-1.442;QD=38.56;ReadPosRankSum=4.195;VQSLOD=5.4535;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,120,1889	0/0:7,0:7:21.07:0,21,336	0/0:28,0:28:81.25:0,81,1250	0/0:17,0:17:23.39:0,23,614	0/0:19,0:19:57.19:0,57,909	0/0:15,0:15:45.15:0,45,719	0/0:23,0:23:69.24:0,69,1096	0/0:30,0:30:90.29:0,90,1390	0/0:25,0:25:75.26:0,75,1199	1/1:0,33:33:99:1368,99,0	1/1:0,16:16:48.16:671,48,0	0/0:25,0:25:75.23:0,75,1149	0/0:31,0:31:90.28:0,90,1392	0/0:33,0:33:99:0,99,1533	1/1:1,32:33:84.28:1171,84,0	0/0:24,0:24:72.22:0,72,1105	0/0:31,0:31:93.30:0,93,1464	0/0:34,0:34:99:0,99,1578	0/0:16,0:16:48.15:0,48,740	0/0:22,0:22:66.20:0,66,1009	0/0:23,0:23:66.22:0,66,1053	0/0:20,0:20:60.18:0,60,900	1/1:0,18:18:44.66:629,45,0	1/1:0,42:42:99:1636,117,0	0/0:22,0:22:60.20:0,60,959	0/0:26,0:26:78.26:0,78,1226	0/0:33,0:33:99:0,99,1579	0/0:6,0:6:18.06:0,18,288
chr10	8680857	.	AC	A	7559.82	PASS	AB=0.989;AC=33;AF=0.589;AN=56;BaseQRankSum=11.593;DP=586;FS=29.363;HRun=2;HaplotypeScore=166.4643;InbreedingCoeff=0.7484;MQ=79.74;MQ0=0;MQRankSum=-5.806;QD=20.43;ReadPosRankSum=2.935;VQSLOD=2.7610;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,34:37:98.41:839,98,0	1/1:0,6:6:18.03:177,18,0	0/1:18,0:18:21.62:22,0,146	0/1:28,1:29:99:147,0,188	1/1:1,8:9:20.91:182,21,0	1/1:4,21:25:68.62:612,69,0	1/1:1,16:17:50.95:446,51,0	0/0:33,0:33:88.08:0,88,528	1/1:3,18:21:62.73:536,63,0	1/1:3,19:22:65.93:597,66,0	1/1:6,9:15:38.93:347,39,0	0/0:23,0:23:23.90:0,24,159	0/0:23,0:23:7.23:0,7,126	0/0:23,0:23:11.77:0,12,161	1/1:3,24:27:80.38:699,80,0	1/1:5,22:27:77.90:682,78,0	1/1:3,19:22:60.03:559,60,0	1/1:1,9:10:26.80:232,27,0	0/0:15,0:15:31.11:0,31,188	0/0:16,0:16:32.48:0,32,136	0/0:39,0:39:86.12:0,86,406	0/0:20,0:20:16.06:0,16,129	1/1:2,12:14:35.58:300,36,0	1/1:1,23:24:53.84:477,54,0	1/1:4,20:24:71.86:671,72,0	0/0:19,1:20:14.95:0,15,149	0/1:23,0:23:35.04:35,0,93	0/0:4,0:4:9.91:0,10,37
chr10	8680859	.	CT	C	6585.36	PASS	AB=0.853;AC=55;AF=0.982;AN=56;BaseQRankSum=3.976;DP=587;FS=3.228;HRun=4;HaplotypeScore=172.1690;InbreedingCoeff=-0.0183;MQ=80.40;MQ0=0;MQRankSum=-2.366;QD=11.22;ReadPosRankSum=3.875;VQSLOD=2.5290;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:36,0:36:69.72:258,70,0	1/1:7,0:7:14.34:49,14,0	1/1:16,2:18:30.42:335,30,0	0/1:24,5:29:7.09:474,0,7	1/1:10,0:10:16.91:71,17,0	1/1:23,0:23:53.36:193,53,0	1/1:17,0:17:41.99:155,42,0	1/1:31,0:31:47.47:338,47,0	1/1:23,0:23:47.06:176,47,0	1/1:22,0:22:52.26:200,52,0	1/1:15,0:15:28.28:106,28,0	1/1:23,0:23:57.99:344,58,0	1/1:24,0:24:64.13:399,64,0	1/1:23,0:23:52.45:328,52,0	1/1:27,0:27:64.13:239,64,0	1/1:27,0:27:60.92:215,61,0	1/1:22,0:22:46.71:165,47,0	1/1:11,0:11:24.85:96,25,0	1/1:14,0:14:13.59:156,14,0	1/1:16,0:16:46.47:269,46,0	1/1:38,0:38:52.27:461,52,0	1/1:19,0:19:49.43:302,49,0	1/1:15,0:15:27.64:107,28,0	1/1:24,0:24:41.57:150,42,0	1/1:26,0:26:57.09:211,57,0	1/1:20,0:20:54.38:296,54,0	1/1:23,0:23:61.81:427,62,0	1/1:4,0:4:11.62:65,12,0
chr10	8681349	.	G	GT	10355.25	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-19.491;DP=886;FS=0.276;HRun=1;HaplotypeScore=84.1738;InbreedingCoeff=0.9999;MQ=88.00;MQ0=0;MQRankSum=-2.541;QD=40.29;ReadPosRankSum=1.816;VQSLOD=5.3812;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,34:34:87.29:1303,87,0	1/1:0,11:11:33.07:470,33,0	0/0:33,0:33:86.86:0,87,1088	0/0:28,0:28:69.16:0,69,858	1/1:2,36:38:99:1569,108,0	1/1:0,32:32:93.32:1394,93,0	1/1:0,33:33:84.28:1259,84,0	0/0:49,0:49:99:0,141,1830	0/0:34,0:34:96.29:0,96,1230	0/0:34,0:34:99:0,102,1295	0/0:19,0:19:57.19:0,57,739	0/0:40,0:40:99:0,117,1490	0/0:42,0:42:99:0,123,1582	0/0:43,0:43:99:0,129,1659	0/0:51,0:51:99:0,141,1816	1/1:0,36:36:99:1484,99,0	1/1:1,39:40:99:1707,114,0	1/1:0,13:13:36.12:540,36,0	0/0:20,0:20:60.20:0,60,779	0/0:26,0:26:78.25:0,78,1012	0/0:49,0:49:99:0,138,1776	0/0:36,0:36:99:0,108,1402	0/0:24,0:24:63.18:0,63,802	0/0:28,0:28:78.25:0,78,1012	1/1:0,20:20:42.14:629,42,0	0/0:28,0:28:81.24:0,81,1025	0/0:34,0:34:99:0,102,1324	0/0:11,0:11:33.11:0,33,428
chr10	8683932	.	G	GCTGAATAATCCAAGTTG	1164.48	PASS	AB=0.732;AC=20;AF=0.909;AN=22;BaseQRankSum=-3.179;DP=30;FS=9.558;HRun=0;HaplotypeScore=26.2429;InbreedingCoeff=-0.2731;MQ=157.62;MQ0=0;MQRankSum=-2.271;QD=46.58;ReadPosRankSum=-2.601;VQSLOD=0.3446;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,0:2:3.01:47,3,0	./.	0/1:3,1:5:32.18:450,0,32	0/1:4,0:6:27.26:273,0,27	./.	1/1:1,0:1:3.01:50,3,0	1/1:2,0:2:6:63,6,0	1/1:2,0:2:6.01:77,6,0	1/1:2,0:2:3.01:92,3,0	./.	./.	1/1:2,0:2:3.01:33,3,0	./.	1/1:1,0:1:3.01:50,3,0	1/1:1,0:1:3.01:90,3,0	./.	./.	./.	./.	1/1:1,0:1:3:25,3,0	./.	./.	./.	./.	./.	./.	./.	./.
chr10	8688635	.	T	TACTC	1600.71	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-5.726;DP=680;FS=14.773;HRun=0;HaplotypeScore=140.7845;InbreedingCoeff=0.9947;MQ=95.51;MQ0=0;MQRankSum=-2.775;QD=50.02;ReadPosRankSum=0.662;VQSLOD=3.5976;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:60.19:0,60,1039	0/0:12,0:12:33.10:0,33,565	0/0:35,0:35:81.26:0,81,1422	0/0:29,0:29:60.12:0,60,1162	0/0:21,0:21:54.18:0,54,957	0/0:28,0:28:81.17:0,81,1386	0/0:27,0:27:72.21:0,72,1208	0/0:31,0:31:84.26:0,84,1418	1/1:6,23:32:66.23:1696,66,0	0/0:32,0:32:96.32:0,96,1699	0/0:19,0:19:57.20:0,57,1024	0/0:28,0:28:81.25:0,81,1394	0/0:21,0:21:60.17:0,60,1019	0/0:18,0:18:54.17:0,54,942	0/0:26,0:26:72.23:0,72,1264	0/0:28,0:28:78.25:0,78,1347	0/0:29,0:29:72.25:0,72,1294	0/0:9,0:9:21.07:0,21,377	0/0:21,0:21:42.14:0,42,741	0/0:29,0:29:78.27:0,78,1388	0/0:32,0:32:90.29:0,90,1564	0/0:22,0:22:57.19:0,57,999	0/0:20,0:20:54.15:0,54,902	0/0:26,0:26:75.24:0,75,1318	0/0:24,0:24:63.22:0,63,1122	0/0:19,0:19:54.17:0,54,942	0/0:29,0:29:87.28:0,87,1519	0/0:10,0:10:27.05:0,27,451
chr10	8690126	.	T	TG	14537.14	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-3.906;DP=776;FS=3.424;HRun=2;HaplotypeScore=85.7650;InbreedingCoeff=0.9951;MQ=94.58;MQ0=0;MQRankSum=-5.755;QD=37.96;ReadPosRankSum=4.607;VQSLOD=5.2870;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,40:42:99:1554,108,0	1/1:1,18:19:54.13:753,54,0	0/0:36,0:36:99:0,105,1201	0/0:35,0:35:92.70:0,93,1065	1/1:0,31:31:87.21:1226,87,0	1/1:0,19:19:48.16:691,48,0	1/1:0,24:24:60.20:864,60,0	0/0:25,0:25:69.20:0,69,835	0/0:30,0:30:90.23:0,90,1067	1/1:0,26:26:78.24:1103,78,0	1/1:0,27:27:72.17:1006,72,0	0/0:29,0:29:84.26:0,84,1040	0/0:24,0:24:69.22:0,69,855	0/0:26,0:26:78.25:0,78,966	1/1:1,38:39:99:1640,114,0	1/1:0,28:28:69.23:993,69,0	1/1:0,19:19:51.17:734,51,0	1/1:1,11:12:30.10:432,30,0	0/0:19,0:19:57.17:0,57,694	0/0:29,0:29:87.25:0,87,1055	0/0:43,0:43:99:0,123,1524	0/0:27,0:27:78.22:0,78,944	1/1:3,34:37:90.30:1295,90,0	1/1:0,36:36:93.31:1339,93,0	1/1:1,23:24:63.21:907,63,0	0/0:21,0:21:20.70:0,21,699	0/0:42,0:42:99:0,123,1484	0/0:7,0:7:12.04:0,12,149
chr10	8690384	.	C	CT	14880.50	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-19.060;DP=814;FS=7.979;HRun=3;HaplotypeScore=75.8589;InbreedingCoeff=0.9989;MQ=91.19;MQ0=0;MQRankSum=-3.606;QD=37.11;ReadPosRankSum=4.226;VQSLOD=5.1217;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,43:43:99:1638,117,0	1/1:2,15:17:33.11:462,33,0	0/0:29,0:29:78.14:0,78,885	0/0:36,0:36:96.21:0,96,1117	1/1:1,22:23:63.17:859,63,0	1/1:1,18:19:54.18:756,54,0	1/1:4,25:29:69.23:966,69,0	0/0:35,0:35:93.28:0,93,1116	0/0:31,0:31:90.28:0,90,1080	1/1:3,32:35:96.31:1328,96,0	1/1:2,19:21:57.15:776,57,0	0/0:38,0:38:99:0,111,1330	0/0:31,0:31:90.28:0,90,1079	0/0:41,0:41:99:0,123,1476	1/1:1,31:32:93.31:1302,93,0	1/1:0,34:34:99:1386,99,0	1/1:2,33:35:90.30:1260,90,0	1/1:5,19:24:45.42:784,45,0	0/0:26,0:26:69.20:0,69,818	0/0:18,0:18:51.16:0,51,612	0/0:35,0:35:99:0,99,1188	0/0:22,0:22:63.19:0,63,756	1/1:2,29:31:81.27:1135,81,0	1/1:0,32:32:90.30:1260,90,0	1/1:2,24:26:69.23:966,69,0	0/0:29,0:29:78.24:0,78,936	0/0:33,0:33:90.28:0,90,1078	0/0:9,0:9:18.06:0,18,216
chr10	8690873	.	CG	C	12433.91	PASS	AC=52;AF=0.963;AN=54;BaseQRankSum=0.189;DP=369;FS=30.035;HRun=1;HaplotypeScore=340.1071;InbreedingCoeff=0.7728;MQ=36.73;MQ0=0;MQRankSum=-0.545;QD=34.07;ReadPosRankSum=2.777;VQSLOD=-0.5282;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,17:17:42.14:584,42,0	1/1:0,9:9:24.08:335,24,0	./.	0/0:3,1:4:7.34:0,7,85	1/1:0,28:28:25.92:640,26,0	1/1:0,8:8:15.05:207,15,0	1/1:0,12:12:30.10:421,30,0	1/1:0,12:12:36.12:505,36,0	1/1:0,9:9:27.09:377,27,0	1/1:0,13:13:39.13:540,39,0	1/1:0,18:18:45.15:625,45,0	1/1:0,11:11:30.10:419,30,0	1/1:0,17:17:48.16:667,48,0	1/1:0,12:12:30.10:417,30,0	1/1:0,19:19:51.17:708,51,0	1/1:0,9:9:24.08:335,24,0	1/1:0,10:10:21.07:288,21,0	1/1:0,6:6:18.06:251,18,0	1/1:0,7:7:18.06:251,18,0	1/1:0,24:24:51.17:705,51,0	1/1:0,6:6:5.72:79,6,0	1/1:0,16:16:36.12:499,36,0	1/1:0,24:23:54.18:747,54,0	1/1:0,12:12:18.06:246,18,0	1/1:0,24:24:63.21:879,63,0	1/1:0,14:14:42.14:586,42,0	1/1:1,19:20:57.19:789,57,0	1/1:0,8:8:24.08:335,24,0
chr10	8690905	.	T	TG	14855.71	PASS	AC=50;AF=0.926;AN=54;BaseQRankSum=2.717;DP=345;FS=0.000;HRun=0;HaplotypeScore=348.2479;InbreedingCoeff=0.6410;MQ=37.20;MQ0=0;MQRankSum=-1.550;QD=43.69;ReadPosRankSum=2.891;VQSLOD=3.0521;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,16:16:45.15:687,45,0	1/1:0,11:11:33.11:524,33,0	0/0:1,0:1:2.22:0,2,7	0/0:2,1:3:0.47:0,0,1	1/1:0,25:25:59.46:842,59,0	1/1:0,10:8:27.09:429,27,0	1/1:0,13:13:39.13:616,39,0	1/1:0,19:19:57.19:862,57,0	1/1:0,7:7:21.07:332,21,0	1/1:0,11:11:32.47:486,32,0	1/1:0,14:14:36.12:550,36,0	1/1:0,10:10:27.09:428,27,0	1/1:0,20:20:60.20:951,60,0	1/1:0,14:14:42.14:665,42,0	1/1:0,13:12:36.12:567,36,0	1/1:0,13:13:39.13:618,39,0	1/1:0,7:7:18.06:284,18,0	1/1:0,3:3:9.03:143,9,0	1/1:0,4:4:12.04:168,12,0	1/1:0,24:24:72.25:1140,72,0	./.	1/1:0,19:19:47.34:744,47,0	1/1:0,22:22:60.14:881,60,0	1/1:0,7:7:12.04:185,12,0	1/1:0,22:22:66.22:1045,66,0	1/1:0,9:9:27.09:427,27,0	1/1:0,22:22:66.22:1045,66,0	1/1:0,5:5:15.05:239,15,0
chr10	8691013	.	G	GT	15442.40	PASS	AC=50;AF=1.000;AN=50;DP=364;FS=0.000;HRun=0;HaplotypeScore=352.7913;InbreedingCoeff=-0.0060;MQ=28.86;MQ0=0;QD=42.66;VQSLOD=2.8196;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,7:9:21.07:333,21,0	1/1:1,7:8:21.07:335,21,0	./.	./.	1/1:2,29:31:75.26:1190,75,0	1/1:2,8:10:27.09:430,27,0	1/1:0,5:5:15.05:239,15,0	1/1:7,9:16:45.11:685,45,0	1/1:1,9:9:21.07:335,21,0	1/1:0,21:21:63.21:1001,63,0	1/1:3,16:19:45.15:716,45,0	1/1:0,13:13:39.13:620,39,0	1/1:2,15:17:51.13:768,51,0	1/1:1,14:14:39.13:621,39,0	1/1:3,5:8:21.07:334,21,0	1/1:0,8:8:24.08:382,24,0	1/1:0,3:3:9.03:143,9,0	1/1:1,3:4:12.04:191,12,0	1/1:0,14:14:39.13:623,39,0	1/1:1,22:23:66.22:1020,66,0	./.	1/1:1,23:24:72.25:1146,72,0	1/1:1,20:21:60.20:955,60,0	1/1:0,9:9:15.05:239,15,0	1/1:3,30:33:90.30:1418,90,0	1/1:1,13:13:39.13:622,39,0	1/1:2,17:19:54.18:859,54,0	1/1:3,5:8:15.05:239,15,0
chr10	8691335	.	AT	A	7842.78	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=11.579;DP=776;FS=11.594;HRun=2;HaplotypeScore=83.8651;InbreedingCoeff=0.9882;MQ=84.37;MQ0=0;MQRankSum=-3.306;QD=33.81;ReadPosRankSum=3.081;VQSLOD=4.3136;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,42:43:99:1480,114,0	1/1:0,6:6:15.05:195,15,0	0/0:28,0:28:75.23:0,75,1040	0/0:23,1:24:8.89:0,9,719	1/1:0,34:34:84.27:1089,84,0	1/1:0,24:24:66.21:857,66,0	1/1:1,19:20:42.08:525,42,0	0/0:34,0:34:99:0,102,1511	0/0:32,0:32:93.32:0,93,1394	0/0:28,0:28:81.27:0,81,1212	0/0:20,0:20:54.18:0,54,807	0/0:29,0:29:87.29:0,87,1301	0/0:34,0:34:99:0,99,1457	0/0:35,0:35:99:0,105,1546	0/0:37,0:37:99:0,111,1660	1/1:0,30:30:87.28:1130,87,0	1/1:0,24:24:63.20:818,63,0	1/1:0,16:16:48.16:623,48,0	0/0:27,0:27:78.26:0,78,1166	0/0:24,0:24:72.20:0,72,1052	0/0:35,0:35:99:0,105,1552	0/0:24,0:24:69.13:0,69,948	0/0:31,0:31:87.25:0,87,1277	0/0:31,0:31:90.30:0,90,1349	1/1:0,35:35:87.28:1127,87,0	0/0:17,0:17:51.17:0,51,763	0/0:35,0:35:99:0,105,1546	0/0:19,0:19:45.08:0,45,617
chr10	8691903	.	GGT	G	133.97	PASS	AB=0.987;AC=13;AF=0.271;AN=48;BaseQRankSum=2.808;DP=649;FS=0.000;HRun=0;HaplotypeScore=159.9610;InbreedingCoeff=-0.0919;MQ=58.95;MQ0=15;MQRankSum=-1.478;QD=0.54;ReadPosRankSum=1.037;VQSLOD=2.6009;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:33:0:0,0,0	0/1:6,0:6:6.46:6,0,30	./.	0/0:38,0:21:0:0,0,0	0/1:16,0:16:19.60:20,0,22	0/0:28,0:28:3.01:0,3,32	0/0:11,0:11:3.47:0,3,26	0/0:38,0:36:5.89:0,6,37	0/0:17,0:19:8.95:0,9,113	1/1:22,0:20:4.20:18,4,0	0/0:14,0:14:2.37:0,2,8	0/1:41,0:41:54.01:54,0,303	0/1:25,1:24:5.70:6,0,223	0/0:31,0:30:23.27:0,23,275	./.	0/0:25,0:25:2.51:0,3,92	0/1:25,0:24:11.41:23,0,11	1/1:11,0:11:0.07:20,0,0	0/1:19,1:19:23.48:23,0,91	0/0:14,0:14:4.22:0,4,184	0/0:49,1:45:12.01:0,12,142	0/0:16,0:16:3.01:0,3,44	./.	./.	0/1:16,0:16:11.31:46,0,11	0/1:30,1:29:40.71:41,0,322	0/0:14,0:14:13.29:0,13,178	0/0:8,0:6:2.96:0,3,19
chr10	8691938	.	GTGTGTGTGTC	G	241.73	PASS	AB=0.979;AC=12;AF=0.222;AN=54;BaseQRankSum=3.051;DP=649;FS=14.565;HRun=0;HaplotypeScore=203.9756;InbreedingCoeff=0.2150;MQ=35.03;MQ0=53;MQRankSum=-2.212;QD=1.22;ReadPosRankSum=-0.728;VQSLOD=1.8708;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:29:0.27:1,0,0	0/1:11,0:10:27.52:28,0,28	0/0:34,0:2:5.98:0,6,48	0/1:37,0:3:0.91:1,0,12	0/0:23,0:22:11.21:0,11,94	0/0:22,0:22:2.82:0,3,46	0/0:11,0:9:5.21:0,5,31	0/0:45,0:38:83.59:0,84,953	0/0:19,0:16:12.46:0,12,402	1/1:21,1:19:31.27:278,31,0	1/1:10,3:14:2.46:24,2,0	0/0:35,0:35:45.86:0,46,831	0/0:30,0:27:31.53:0,32,296	0/0:25,0:24:23.41:0,23,336	0/1:18,0:17:2.41:2,0,21	0/0:16,0:16:13.75:0,14,187	0/0:24,0:23:0.63:0,1,156	0/0:11,0:11:8.14:0,8,129	0/0:19,0:18:2.64:0,3,671	0/1:17,0:17:5.27:5,0,320	0/0:55,0:50:11.93:0,12,323	0/0:22,0:21:3.01:0,3,68	./.	0/1:17,2:18:0:0,0,0	0/0:26,0:25:13.79:0,14,138	0/1:29,1:28:24.61:25,0,1165	0/0:9,0:9:14.41:0,14,259	0/0:7,0:5:14.91:0,15,185
chr10	8691940	.	GTGTGTGTC	G	224.14	PASS	AB=0.984;AC=12;AF=0.222;AN=54;BaseQRankSum=3.832;DP=637;FS=4.035;HRun=0;HaplotypeScore=189.7946;InbreedingCoeff=0.1091;MQ=34.39;MQ0=54;MQRankSum=-2.516;QD=0.97;ReadPosRankSum=0.929;VQSLOD=2.6134;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:27,1:27:0:0,0,0	0/1:9,1:9:29.82:71,0,30	0/0:37,0:2:5.98:0,6,48	0/1:38,0:4:0.91:1,0,12	0/0:23,0:22:0.88:0,1,53	0/0:22,0:22:2.74:0,3,19	0/0:11,0:9:5.22:0,5,32	0/0:41,0:34:80.37:0,80,771	0/0:17,0:15:8.96:0,9,311	1/1:21,0:18:26.93:212,27,0	0/0:14,0:14:2.37:0,2,8	0/0:33,0:33:11.40:0,11,617	0/1:30,0:27:9.11:9,0,251	0/0:24,0:23:23.05:0,23,317	1/1:12,4:15:1.13:7,1,0	0/0:16,0:16:13.35:0,13,127	0/0:24,0:23:2.93:0,3,81	0/1:11,0:11:20.82:21,0,38	0/0:19,0:18:11.92:0,12,569	0/0:17,0:17:17.31:0,17,396	0/0:52,0:47:12.04:0,12,271	0/0:24,0:23:3.01:0,3,43	./.	0/1:17,0:18:0.01:0,0,0	0/1:26,0:25:14.91:15,0,73	0/1:31,0:29:15.60:16,0,898	0/0:10,0:9:15.03:0,15,252	0/0:7,0:5:14.91:0,15,161
chr10	8691942	.	GTGTGTC	G	521.56	PASS	AB=0.981;AC=21;AF=0.404;AN=52;BaseQRankSum=3.954;DP=632;FS=3.441;HRun=0;HaplotypeScore=177.6938;InbreedingCoeff=0.4731;MQ=33.98;MQ0=54;MQRankSum=-0.652;QD=1.91;ReadPosRankSum=2.724;VQSLOD=2.3371;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:26,1:26:0.02:0,0,0	1/1:10,0:9:3.01:45,3,0	0/0:36,0:2:5.98:0,6,48	0/1:39,0:4:0.91:1,0,12	1/1:23,0:22:4.66:22,5,0	1/1:19,2:21:2.32:24,2,0	0/1:11,0:9:0.01:0,0,0	0/0:41,0:35:77.30:0,77,677	0/0:18,0:15:9.03:0,9,249	1/1:19,0:16:25.59:198,26,0	0/1:14,0:14:0:0,0,1	0/0:33,0:33:9.48:0,9,381	0/0:31,0:28:5.94:0,6,97	0/0:24,0:23:8.81:0,9,128	1/1:15,0:14:1.52:7,2,0	0/1:14,1:15:6.22:6,0,13	1/1:23,0:22:14.92:66,15,0	1/1:10,1:11:18.20:182,18,0	0/0:17,0:17:19.10:0,19,482	0/0:16,0:16:14.71:0,15,241	0/0:53,0:47:5.69:0,6,132	./.	./.	0/1:19,0:18:0:0,0,0	0/1:25,1:25:14.90:118,0,15	0/0:32,0:30:1.39:0,1,549	0/0:9,0:10:11.43:0,11,118	0/0:7,0:5:14.91:0,15,135
chr10	8691944	.	GTGTC	G	989.87	PASS	AB=0.971;AC=23;AF=0.426;AN=54;BaseQRankSum=1.869;DP=621;FS=4.017;HRun=0;HaplotypeScore=165.0861;InbreedingCoeff=0.4136;MQ=33.39;MQ0=55;MQRankSum=-0.794;QD=3.49;ReadPosRankSum=1.928;VQSLOD=2.5070;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:26,1:26:0.20:0,0,0	1/1:9,1:9:1.72:33,2,0	0/0:38,0:3:5.98:0,6,48	0/1:39,0:4:0.91:1,0,12	1/1:20,3:22:8.38:124,8,0	0/0:16,4:20:2.62:0,3,9	1/1:10,0:8:3.01:43,3,0	0/0:43,0:35:77.17:0,77,618	0/1:18,0:15:9.51:10,0,212	1/1:17,0:14:28.34:204,28,0	0/0:13,0:13:0:0,0,0	0/0:33,0:33:12.79:0,13,389	0/0:30,0:27:19.05:0,19,173	0/0:22,1:22:19.23:0,19,205	1/1:14,0:13:1.86:8,2,0	0/1:13,2:15:38.74:47,0,39	1/1:20,3:22:21.02:322,21,0	1/1:10,1:11:22.61:220,23,0	0/1:17,1:18:5.44:5,0,439	0/1:16,0:16:7.48:7,0,265	0/0:51,0:46:10.64:0,11,178	0/0:24,0:23:3.01:0,3,32	./.	0/1:18,0:17:0:0,0,0	1/1:24,1:24:8.09:127,8,0	0/0:31,0:29:5.42:0,5,547	0/0:11,0:10:17.92:0,18,222	0/0:7,0:5:14.84:0,15,115
chr10	8691946	.	GTC	G	650.54	PASS	AB=0.996;AC=23;AF=0.426;AN=54;BaseQRankSum=2.996;DP=612;FS=5.823;HRun=0;HaplotypeScore=158.3180;InbreedingCoeff=0.3627;MQ=33.12;MQ0=54;MQRankSum=-1.392;QD=2.07;ReadPosRankSum=1.303;VQSLOD=2.0590;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:24,1:24:0:0,0,0	0/1:10,0:9:2.45:31,0,2	0/0:40,0:3:5.98:0,6,48	0/1:40,0:4:0.91:1,0,12	1/1:23,0:22:11.61:85,12,0	0/0:20,0:20:3.37:0,3,20	1/1:9,0:7:2.95:19,3,0	0/0:42,0:35:79.95:0,80,614	0/1:18,0:15:23.99:24,0,141	1/1:15,0:12:28.52:187,29,0	0/1:12,0:13:0:0,0,0	0/1:32,0:32:36.94:37,0,308	0/1:30,0:27:22.14:22,0,130	0/0:22,0:21:3.44:0,3,165	1/1:12,0:11:2.11:8,2,0	0/1:15,0:15:24.58:25,0,47	1/1:21,0:20:20.25:134,20,0	1/1:10,1:11:21.66:127,22,0	0/0:18,0:18:20.78:0,21,380	0/0:18,0:18:14.63:0,15,212	0/0:53,0:50:17.21:0,17,194	0/0:23,0:22:3.01:0,3,44	./.	0/1:16,0:15:0:0,0,0	1/1:22,2:23:11.44:114,11,0	0/0:30,0:28:6.71:0,7,486	0/0:11,0:10:17.89:0,18,205	0/0:7,0:5:14.84:0,15,111
chr10	8691962	.	GCA	G	573.98	PASS	AB=0.945;AC=19;AF=0.339;AN=56;BaseQRankSum=3.443;DP=564;FS=9.518;HRun=0;HaplotypeScore=153.9508;InbreedingCoeff=0.0486;MQ=33.48;MQ0=47;MQRankSum=-0.341;QD=2.25;ReadPosRankSum=-0.418;VQSLOD=1.5950;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:14,4:17:0.21:0,0,0	1/1:9,0:8:5.93:63,6,0	0/0:56,0:5:12.93:0,13,214	0/0:64,0:8:19.28:0,19,281	0/1:15,2:17:0.17:0,0,0	0/1:14,0:14:0.17:0,0,0	0/0:7,0:5:0:0,0,0	0/0:41,0:36:75.18:0,75,1271	0/0:22,0:20:26.99:0,27,473	0/1:12,0:11:25.09:83,0,25	0/0:11,1:12:0.36:0,0,1	0/1:22,1:23:37.06:37,0,223	0/1:24,2:24:45.31:220,0,45	0/1:18,0:17:35.44:35,0,45	1/1:11,1:11:1.34:7,1,0	0/1:6,2:8:51.91:64,0,52	0/1:18,0:18:58.95:59,0,108	0/1:8,1:9:72.64:73,0,103	0/0:17,0:14:10.39:0,10,584	0/1:13,0:13:0:0,0,0	0/0:40,1:40:11.38:0,11,238	0/1:22,1:22:0:0,0,0	0/1:11,1:7:0:0,0,0	0/1:11,0:10:0.09:0,0,0	0/0:19,0:19:1.75:0,2,73	0/0:23,0:21:7.52:0,8,652	0/1:12,0:11:58.86:59,0,114	0/0:6,0:4:12.04:0,12,198
chr10	8691964	.	ATGTGTGTC	A	570.29	PASS	AB=0.952;AC=15;AF=0.268;AN=56;BaseQRankSum=3.495;DP=584;FS=0.000;HRun=0;HaplotypeScore=172.6069;InbreedingCoeff=0.4558;MQ=33.83;MQ0=46;MQRankSum=-0.681;QD=3.93;ReadPosRankSum=3.462;VQSLOD=2.4026;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:19:2.92:0,3,18	1/1:9,0:8:2.35:10,2,0	0/0:58,0:7:18.06:0,18,304	0/0:66,0:9:16.76:0,17,300	0/0:16,1:17:0:0,0,1	0/1:14,0:14:0.17:0,0,1	0/1:6,1:5:0.09:0,0,0	0/0:43,0:38:48.16:0,48,1049	0/0:21,0:19:23.90:0,24,841	1/1:10,2:11:27.06:550,27,0	0/0:10,3:13:3.01:0,3,30	0/0:22,0:22:15.52:0,16,262	0/0:26,0:24:12:0,12,203	0/0:20,0:19:12.89:0,13,179	0/1:12,0:11:2.82:3,0,27	1/1:8,0:8:4.75:58,5,0	1/1:17,0:17:5.89:68,6,0	0/0:9,0:9:0.47:0,0,1	0/1:20,0:17:4.14:4,0,1023	0/1:14,0:14:0.01:0,0,1	0/0:45,0:44:3.01:0,3,54	0/0:23,0:22:0:0,0,0	0/0:13,0:8:0:0,0,0	0/1:9,1:9:0.01:0,0,0	0/1:19,3:22:0.01:0,0,1	0/0:22,0:20:45.15:0,45,1178	0/0:12,0:11:12.04:0,12,260	0/0:5,0:4:6.02:0,6,184
chr10	8691972	.	CTGTGTGTCTGTGTGTGCA	C	1796.67	PASS	AB=0.914;AC=18;AF=0.321;AN=56;BaseQRankSum=1.709;DP=576;FS=7.828;HRun=0;HaplotypeScore=193.6025;InbreedingCoeff=0.2735;MQ=36.59;MQ0=22;MQRankSum=-1.755;QD=8.20;ReadPosRankSum=0.190;VQSLOD=1.8414;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:21:3.87:0,4,19	1/1:5,3:7:2.42:10,2,0	0/0:56,0:12:36.11:0,36,820	0/0:64,0:13:28.30:0,28,968	0/0:6,8:14:0:0,0,0	0/1:11,3:14:0.19:0,0,1	0/0:7,0:5:0.35:0,0,1	0/1:44,0:40:55.76:56,0,1069	0/0:20,0:19:26.93:0,27,1395	1/1:9,4:13:33.11:1270,33,0	0/0:10,3:13:5.81:0,6,32	0/0:22,0:23:6:0,6,337	0/1:24,0:22:17.16:17,0,49	0/0:19,0:19:11.15:0,11,82	0/1:8,5:12:2.84:3,0,13	1/1:4,1:5:5.83:205,6,0	1/1:3,12:15:6.02:244,6,0	1/1:8,0:8:7.84:109,8,0	0/1:20,0:18:16:16,0,949	0/1:13,0:13:0.27:0,0,2	0/0:46,0:45:2.69:0,3,54	0/0:23,0:22:0:0,0,1	0/0:12,2:10:1.55:0,2,4	0/0:8,1:8:0:0,0,0	0/1:20,5:26:0:0,0,1	0/0:22,0:21:2.96:0,3,826	0/1:15,0:15:6.50:7,0,118	0/0:4,0:4:6.02:0,6,185
chr10	8691982	.	G	GTGTGTGCA	5338.94	PASS	AB=0.825;AC=28;AF=0.500;AN=56;BaseQRankSum=-1.448;DP=608;FS=34.971;HRun=0;HaplotypeScore=159.1275;InbreedingCoeff=0.3679;MQ=39.17;MQ0=17;MQRankSum=-0.768;QD=13.02;ReadPosRankSum=2.842;VQSLOD=2.3676;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:20:0.32:0,0,3	0/1:6,0:5:0.09:0,0,0	0/0:46,0:12:27.06:0,27,508	0/0:60,0:15:23.32:0,23,666	0/0:11,0:11:0:0,0,0	1/1:12,0:12:2.48:29,2,0	0/0:7,0:6:1.49:0,1,4	1/1:46,0:39:51.16:985,51,0	0/0:20,0:19:23.94:0,24,616	0/1:13,0:13:59.34:320,0,59	0/0:13,0:13:5.68:0,6,28	0/1:9,21:33:0:1,0,0	1/1:6,18:23:12.04:433,12,0	1/1:6,14:23:6.02:254,6,0	0/0:12,0:12:5.77:0,6,33	0/1:10,0:10:5.01:133,0,5	1/1:13,0:13:8.95:174,9,0	0/1:4,0:4:11.15:154,0,11	0/1:22,0:19:19.50:632,0,20	0/1:2,10:16:0.17:1,0,0	0/1:13,41:61:0:0,0,0	0/1:8,20:29:0:2,0,0	1/1:12,0:8:1.25:3,1,0	0/0:7,0:6:0:0,0,0	0/1:30,0:30:0.24:0,0,1	1/1:8,16:25:48.16:1494,48,0	1/1:3,15:18:14.82:516,15,0	1/1:8,0:8:17.92:207,18,0
chr10	8691990	.	ATG	A	499.76	PASS	AB=0.890;AC=10;AF=0.179;AN=56;BaseQRankSum=2.358;DP=615;FS=14.072;HRun=0;HaplotypeScore=163.1958;InbreedingCoeff=0.0274;MQ=40.46;MQ0=12;MQRankSum=-0.648;QD=2.86;ReadPosRankSum=1.778;VQSLOD=2.1220;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:20:0.89:0,1,3	0/1:10,0:9:0:0,0,0	0/0:43,0:15:39.13:0,39,670	0/0:55,0:15:31.61:0,32,637	0/0:10,0:10:0:0,0,0	0/1:12,0:12:0.07:0,0,0	0/0:8,0:8:2.91:0,3,20	0/1:29,18:40:99:232,0,671	0/0:18,0:18:29.97:0,30,525	0/0:14,0:14:9.91:0,10,238	0/0:17,0:17:0.94:0,1,3	0/0:32,0:32:12.01:0,12,211	0/1:26,0:26:14.74:15,0,235	0/0:24,0:24:12.01:0,12,149	0/0:17,0:17:1.20:0,1,15	0/0:11,0:11:5.93:0,6,49	0/0:13,0:14:7.26:0,7,62	0/0:3,0:4:6.35:0,6,37	0/1:12,7:17:99:225,0,260	0/0:19,0:19:12.04:0,12,203	0/0:60,0:59:12.01:0,12,210	0/0:28,0:28:6:0,6,106	0/0:16,0:13:1.50:0,1,11	1/1:5,0:6:1.73:5,2,0	0/0:28,0:29:5.49:0,5,24	0/1:28,1:28:72.57:73,0,612	0/1:19,0:18:25.58:26,0,114	0/1:4,3:7:42.45:42,0,192
chr10	8692036	.	TTG	T	435.15	PASS	AB=0.975;AC=15;AF=0.268;AN=56;BaseQRankSum=10.869;DP=878;FS=10.840;HRun=0;HaplotypeScore=273.8098;InbreedingCoeff=0.3669;MQ=38.75;MQ0=21;MQRankSum=-5.460;QD=1.70;ReadPosRankSum=-5.953;VQSLOD=-0.1361;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:17,0:17:5.75:6,0,13	0/1:11,0:11:8.37:8,0,31	0/0:87,0:34:69.20:0,69,1068	0/0:77,0:29:78.25:0,78,1264	0/0:9,0:10:0.47:0,0,1	1/1:19,0:19:6.46:29,6,0	0/0:22,0:22:12.47:0,12,246	0/0:44,0:44:99:0,111,1779	0/0:35,0:33:75.04:0,75,1235	1/1:33,0:32:12.05:232,12,0	0/1:20,4:24:0.82:44,0,1	0/0:40,0:40:75.26:0,75,1294	0/0:36,0:36:84.28:0,84,1387	0/0:36,0:36:57.19:0,57,951	1/1:30,2:31:27.08:134,27,0	0/1:37,0:37:13.84:95,0,14	0/1:11,0:11:10.59:11,0,39	0/0:5,0:5:8.70:0,9,99	0/0:17,0:16:42.12:0,42,659	0/0:37,0:37:72.24:0,72,1139	0/0:64,0:62:68.49:0,68,1100	0/0:30,0:30:48.16:0,48,786	0/1:28,1:29:3.98:4,0,21	1/1:12,0:12:0.13:15,0,0	0/1:31,0:31:16.36:16,0,46	0/0:46,0:46:99:0,120,2027	0/0:27,0:26:45.12:0,45,698	0/0:9,0:9:27.09:0,27,467
chr10	8692040	.	GTGTGTA	G	5542.10	PASS	AB=0.866;AC=24;AF=0.429;AN=56;BaseQRankSum=10.720;DP=878;FS=2.432;HRun=0;HaplotypeScore=271.1483;InbreedingCoeff=0.6942;MQ=37.92;MQ0=22;MQRankSum=-9.992;QD=18.85;ReadPosRankSum=-6.852;VQSLOD=3.1000;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:17:8.35:143,8,0	1/1:11,0:11:8.17:139,8,0	0/0:79,0:29:47.18:0,47,807	0/0:81,0:32:70.60:0,71,1648	1/1:6,2:8:5.44:83,5,0	1/1:20,0:20:17.75:393,18,0	1/1:16,5:21:10.92:326,11,0	0/0:45,0:45:99:0,99,2418	0/0:35,0:33:72.21:0,72,1987	0/1:26,4:29:71.85:580,0,72	1/1:20,4:24:21.67:346,22,0	0/0:41,0:41:75.26:0,75,2449	0/0:37,0:37:87.30:0,87,2587	0/0:36,0:36:57.20:0,57,1746	1/1:27,3:29:41.60:913,42,0	1/1:42,0:42:23.10:1091,23,0	0/1:6,4:10:13.15:157,0,13	0/1:3,0:5:0.56:1,0,4	0/0:20,0:18:39.61:0,40,1095	0/0:34,0:34:72.23:0,72,1926	0/0:62,0:60:65.55:0,66,1721	0/0:35,0:35:48.16:0,48,1474	1/1:26,3:29:43.64:801,44,0	0/1:11,2:13:26.37:69,0,26	1/1:34,0:34:6.68:501,7,0	0/0:43,0:43:99:0,114,3735	0/0:27,0:26:45.15:0,45,1178	0/0:9,0:9:27.09:0,27,895
chr10	8692042	.	G	GTATGTGGT	6404.15	PASS	AB=1.000;AC=25;AF=0.446;AN=56;BaseQRankSum=10.286;DP=887;FS=2.722;HRun=0;HaplotypeScore=297.7245;InbreedingCoeff=0.7237;MQ=37.92;MQ0=21;MQRankSum=-9.953;QD=21.00;ReadPosRankSum=-7.086;VQSLOD=2.7551;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:17,0:17:42:42,0,61	1/1:11,0:11:9.48:142,9,0	0/0:78,0:30:75.10:0,75,1486	0/0:81,0:34:93.27:0,93,2090	1/1:9,0:9:3:33,3,0	1/1:20,0:20:18.49:169,18,0	0/1:23,0:23:48.69:184,0,49	0/0:45,0:45:99:0,126,2994	0/0:35,0:33:74.78:0,75,1955	1/1:8,23:30:72.24:2213,72,0	1/1:11,14:26:37.32:472,37,0	0/0:40,0:40:73.87:0,74,2064	0/0:37,0:37:87.29:0,87,2149	0/0:37,0:37:55.68:0,56,1447	1/1:11,22:33:62.03:1046,62,0	1/1:43,0:43:56.72:582,57,0	1/1:11,0:11:17:226,17,0	1/1:4,0:4:4.87:170,5,0	0/0:20,0:18:49.72:0,50,1200	0/0:34,0:34:72.03:0,72,1619	0/0:61,0:59:68.17:0,68,1469	0/0:34,0:34:45.46:0,45,1228	1/1:9,21:30:45.79:817,46,0	1/1:5,8:13:8.81:100,9,0	0/1:33,0:33:14.28:209,0,14	0/0:44,0:44:99:0,120,3372	0/0:27,0:26:47.43:0,47,1028	0/0:9,0:9:27.09:0,27,759
chr10	8692046	.	A	ATGTGGTTGTG	9915.88	PASS	AB=0.600;AC=27;AF=0.482;AN=56;BaseQRankSum=10.568;DP=896;FS=2.583;HRun=0;HaplotypeScore=307.0526;InbreedingCoeff=0.8940;MQ=37.95;MQ0=19;MQRankSum=-10.580;QD=30.42;ReadPosRankSum=-6.826;VQSLOD=2.6635;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:6,12:18:36.12:261,0,36	1/1:1,10:11:9.50:361,10,0	0/0:80,0:32:35.75:0,36,778	0/0:75,0:33:87.12:0,87,1600	1/1:9,1:11:5.95:119,6,0	1/1:3,19:23:18.06:575,18,0	1/1:25,0:25:50.69:761,51,0	0/0:46,0:46:99:0,117,2224	0/0:33,0:32:71.57:0,72,1972	1/1:31,0:30:69.70:1924,70,0	1/1:24,0:24:39.10:466,39,0	0/0:40,0:40:73.46:0,73,2361	0/0:36,0:36:87.30:0,87,2528	0/0:39,0:39:58.85:0,59,1717	1/1:36,0:35:55.76:1028,56,0	1/1:3,40:49:63.19:1985,63,0	1/1:11,0:11:17.95:373,18,0	1/1:3,2:6:8.86:338,9,0	0/0:18,0:16:43.37:0,43,904	0/0:33,0:33:72.23:0,72,1865	0/0:56,0:54:65.48:0,65,1689	0/0:36,0:36:45.95:0,46,1417	1/1:28,0:28:53.65:817,54,0	1/1:13,0:13:15.56:114,16,0	1/1:5,31:40:30.05:793,30,0	0/0:40,0:40:99:0,117,3583	0/0:26,0:25:47.53:0,48,1172	0/0:9,0:9:27.09:0,27,865
chr10	8692950	.	TA	T	399.44	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=0.236;DP=656;FS=0.876;HRun=9;HaplotypeScore=84.9641;InbreedingCoeff=0.9480;MQ=74.89;MQ0=1;MQRankSum=-0.889;QD=19.97;ReadPosRankSum=1.066;VQSLOD=4.1295;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:45.11:0,45,507	0/0:18,0:18:45:0,45,499	0/0:15,0:14:17.58:0,18,234	0/0:10,0:9:10.26:0,10,67	0/0:41,0:43:99:0,129,1408	0/0:27,0:27:72.21:0,72,831	0/0:20,0:20:57.13:0,57,622	0/0:31,0:31:75.21:0,75,849	1/1:1,19:20:54.03:494,54,0	0/0:36,0:36:93.26:0,93,1058	0/0:24,0:25:75.03:0,75,827	0/0:22,0:22:51.13:0,51,569	0/0:18,0:18:48.12:0,48,542	0/0:25,0:25:69.14:0,69,762	0/0:23,0:23:63.18:0,63,717	0/0:21,0:21:51.12:0,51,568	0/0:27,0:27:75.21:0,75,855	0/0:15,0:15:45.12:0,45,509	0/0:17,0:17:51.14:0,51,580	0/0:35,0:35:93.25:0,93,1048	0/0:18,0:18:51.14:0,51,579	0/0:28,0:28:75.14:0,75,846	0/0:23,0:23:57.16:0,57,649	0/0:22,0:21:63.18:0,63,718	0/0:30,0:30:87.20:0,87,980	0/0:23,0:23:66.19:0,66,753	0/0:34,0:35:93.11:0,93,1053	0/0:11,0:11:27.08:0,27,312
chr10	8693703	.	CTCTCTCTCTCTGTGTGTG	C	84.08	PASS	AB=1.000;AC=5;AF=0.096;AN=52;BaseQRankSum=4.670;DP=393;FS=7.209;HRun=0;HaplotypeScore=179.0213;InbreedingCoeff=0.0220;MQ=31.62;MQ0=33;MQRankSum=-3.174;QD=1.43;ReadPosRankSum=0.601;VQSLOD=1.9847;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:9:3.01:0,3,68	0/0:9,0:8:16.76:0,17,320	./.	./.	0/0:21,0:19:3.95:0,4,61	0/0:24,0:20:6.48:0,6,115	0/0:15,0:12:15.05:0,15,362	0/0:20,0:16:0.88:0,1,159	1/1:1,10:11:3.01:157,3,0	0/1:17,0:16:5.10:5,0,734	0/0:14,0:14:3.95:0,4,39	0/1:14,0:14:8.74:9,0,44	0/1:17,0:16:6.39:6,0,69	0/0:16,0:15:9.01:0,9,120	0/0:24,0:23:15.92:0,16,165	0/0:13,0:13:7.27:0,7,192	0/0:14,0:11:14.53:0,15,353	0/0:9,0:6:14.36:0,14,267	0/0:11,0:10:22.43:0,22,340	0/0:17,0:16:4.42:0,4,41	0/0:8,0:5:3.01:0,3,48	0/0:9,0:7:3.01:0,3,48	0/0:12,0:12:12.50:0,12,175	0/0:11,0:9:6.02:0,6,153	0/0:19,0:16:3.48:0,3,91	0/0:17,0:15:31:0,31,881	0/0:15,0:14:7.28:0,7,127	0/0:7,0:6:8.84:0,9,132
chr10	8693717	.	G	GTATA	2117.15	PASS	AB=0.916;AC=30;AF=0.682;AN=44;BaseQRankSum=0.492;DP=338;FS=3.873;HRun=0;HaplotypeScore=130.9523;InbreedingCoeff=0.4283;MQ=28.31;MQ0=30;MQRankSum=0.626;QD=8.75;ReadPosRankSum=1.647;VQSLOD=2.9417;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:14,0:2:6.02:0,6,111	0/0:16,0:2:6.02:0,6,120	1/1:19,0:17:0.47:2,0,0	0/1:19,2:18:0.06:0,0,0	0/0:12,1:9:3.01:0,3,50	1/1:9,8:14:30.32:570,30,0	0/0:13,0:13:5.84:0,6,42	1/1:5,8:15:35.05:607,35,0	1/1:5,8:15:0.19:1,0,0	1/1:11,0:11:8.87:85,9,0	1/1:12,0:11:5.98:51,6,0	1/1:12,0:12:5.58:27,6,0	1/1:10,10:20:0.34:1,0,0	./.	./.	./.	1/1:12,0:11:5.59:271,6,0	1/1:15,0:15:0.74:22,1,0	./.	1/1:9,0:7:2.74:12,3,0	0/1:6,3:9:0.17:0,0,1	0/0:5,5:8:1.47:0,1,4	0/1:15,0:12:0:0,0,0	1/1:16,0:14:25.55:390,26,0	1/1:15,0:15:13.60:102,14,0	0/1:8,0:5:22.65:97,0,23
chr10	8693729	.	GTGTGTGTA	G	395.90	PASS	AB=1.000;AC=12;AF=0.261;AN=46;BaseQRankSum=1.643;DP=328;FS=22.604;HRun=0;HaplotypeScore=103.6849;InbreedingCoeff=0.1188;MQ=26.69;MQ0=27;MQRankSum=-0.186;QD=3.73;ReadPosRankSum=2.633;VQSLOD=0.3709;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:16,0:2:6.02:0,6,210	0/0:19,0:3:8.95:0,9,239	0/0:13,9:21:0.89:0,1,3	0/0:11,8:16:2.99:0,3,23	0/0:10,3:10:3.01:0,3,53	0/1:13,0:9:8.94:90,0,9	1/1:14,0:14:3.01:52,3,0	0/1:15,0:13:20.29:266,0,20	0/0:13,0:12:1.72:0,2,4	1/1:11,0:10:2.97:20,3,0	1/1:11,0:10:0.46:2,0,0	0/0:10,0:10:0:0,0,0	0/0:18,0:17:0.47:0,0,2	./.	0/0:6,0:5:2.74:0,3,12	./.	0/1:15,0:11:28.88:29,0,53	0/0:14,0:13:2.19:0,2,5	./.	0/0:8,0:7:0:0,0,0	0/0:10,0:10:0:0,0,0	0/0:8,0:6:0:0,0,0	0/0:4,12:13:0:0,0,1	0/1:14,0:12:25.23:25,0,31	1/1:13,0:13:3.61:18,4,0	0/0:7,0:5:2.47:0,2,81
chr10	8693737	.	ATATG	A	164.56	PASS	AB=1.000;AC=13;AF=0.295;AN=44;BaseQRankSum=1.404;DP=319;FS=6.201;HRun=0;HaplotypeScore=88.1453;InbreedingCoeff=0.2322;MQ=25.50;MQ0=30;MQRankSum=-0.130;QD=1.35;ReadPosRankSum=2.646;VQSLOD=1.1164;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:20,0:2:6.02:0,6,135	0/0:22,0:3:9.03:0,9,192	0/0:18,0:18:0.47:0,0,2	0/0:18,0:16:4.70:0,5,26	0/0:12,0:9:2.97:0,3,20	0/1:25,0:14:1.54:2,0,131	0/0:10,1:11:2.50:0,2,9	0/1:15,0:11:0.37:0,0,78	0/0:9,0:8:0.89:0,1,2	1/1:6,5:10:2.68:11,3,0	1/1:11,0:10:2.64:15,3,0	./.	0/1:16,0:15:0:0,0,1	./.	0/0:4,0:4:2.74:0,3,12	./.	0/1:12,0:6:16.29:29,0,16	0/0:13,1:13:1.41:0,1,4	0/0:7,0:2:2.04:0,2,6	./.	0/0:11,0:11:0:0,0,0	0/0:7,0:6:0:0,0,0	0/0:19,0:16:0:0,0,0	1/1:12,0:10:7.39:132,7,0	1/1:13,0:13:11.74:57,12,0	0/1:7,0:5:23.72:28,0,24
chr10	8693739	.	ATG	A	90.32	PASS	AB=0.986;AC=10;AF=0.227;AN=44;BaseQRankSum=3.686;DP=317;FS=5.591;HRun=0;HaplotypeScore=84.7079;InbreedingCoeff=0.1151;MQ=25.44;MQ0=31;MQRankSum=0.100;QD=1.09;ReadPosRankSum=3.709;VQSLOD=0.7275;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:20,0:2:6.02:0,6,82	0/0:22,0:3:9.03:0,9,122	0/0:18,0:18:0:0,0,1	0/0:18,0:16:2.41:0,2,7	0/0:12,0:9:2.90:0,3,16	0/0:24,0:13:12:0,12,72	1/1:11,0:11:0.89:2,1,0	0/0:16,0:11:7.37:0,7,38	0/0:9,0:8:0.47:0,0,1	1/1:11,0:10:2.74:12,3,0	0/1:10,1:10:6.74:27,0,7	./.	0/0:16,0:15:0:0,0,0	./.	0/1:4,0:4:0:0,0,0	./.	0/1:14,0:7:24.64:25,0,30	0/0:13,0:12:1.41:0,1,3	0/0:7,0:2:1.55:0,2,4	./.	0/0:10,0:10:0:0,0,0	0/0:7,0:6:0:0,0,0	0/0:18,0:15:0:0,0,0	0/1:12,0:10:7.76:67,0,8	0/1:13,0:13:11.43:27,0,11	0/1:7,0:5:8.60:29,0,9
chr10	8693747	.	G	GTA	343.16	PASS	AB=0.959;AC=21;AF=0.500;AN=42;BaseQRankSum=-0.110;DP=300;FS=9.787;HRun=0;HaplotypeScore=84.2064;InbreedingCoeff=0.1910;MQ=25.74;MQ0=26;MQRankSum=0.586;QD=1.78;ReadPosRankSum=-1.007;VQSLOD=0.5417;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:13,0:2:6.02:0,6,84	0/0:17,0:3:9.03:0,9,126	0/1:18,0:18:0:1,0,0	0/0:18,0:15:1.82:0,2,15	0/0:10,0:8:2.96:0,3,19	0/1:18,4:11:30.64:239,0,31	1/1:10,1:11:0.89:2,1,0	0/0:14,0:10:12.54:0,13,91	1/1:9,0:8:0.47:1,0,0	1/1:11,0:10:2.99:23,3,0	1/1:10,1:10:5.88:36,6,0	./.	0/1:16,0:15:0:0,0,0	./.	./.	./.	1/1:16,0:7:0.35:73,0,0	0/1:13,1:13:0.03:0,0,0	1/1:6,1:2:0.89:2,1,0	./.	0/1:10,0:10:0:0,0,0	0/1:7,0:6:0:0,0,0	0/1:16,0:13:0:0,0,0	0/1:12,1:11:38.24:57,0,38	0/1:11,1:12:9.49:9,0,20	0/0:6,0:5:2.33:0,2,19
chr10	8694296	.	TA	T	2434.42	PASS	AB=0.671;AC=42;AF=0.840;AN=50;BaseQRankSum=-0.211;DP=235;FS=0.000;HRun=1;HaplotypeScore=66.7063;InbreedingCoeff=0.3741;MQ=27.36;MQ0=9;MQRankSum=2.026;QD=13.60;ReadPosRankSum=-0.159;VQSLOD=2.3289;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,6:9:3.11:8,3,0	./.	0/0:25,0:1:3.01:0,3,42	0/0:17,0:3:9.03:0,9,124	1/1:1,5:9:1.73:6,2,0	1/1:0,5:5:4.52:12,5,0	1/1:0,6:5:10.68:94,11,0	1/1:1,13:14:36.12:503,36,0	1/1:2,9:11:3.01:34,3,0	1/1:2,0:7:20.89:175,21,0	./.	1/1:0,6:6:9.42:84,9,0	1/1:0,6:6:9.03:126,9,0	1/1:1,8:8:5.54:84,6,0	0/1:4,4:11:0:0,0,0	1/1:0,6:6:10.78:58,11,0	0/1:1,2:3:11.17:20,0,11	1/1:0,3:3:3.48:43,3,0	1/1:2,10:11:33.02:422,33,0	0/1:0,8:8:0.01:0,0,0	1/1:1,9:10:3.01:42,3,0	./.	0/1:2,1:4:0:0,0,0	1/1:1,4:8:2.98:23,3,0	1/1:1,4:5:2.97:8,3,0	1/1:2,6:7:21.05:274,21,0	1/1:0,11:11:21.07:281,21,0	1/1:0,6:6:18.06:252,18,0
chr10	8694297	.	AG	A	1217.08	PASS	AB=0.940;AC=39;AF=0.750;AN=52;BaseQRankSum=-1.264;DP=253;FS=0.000;HRun=1;HaplotypeScore=79.7456;InbreedingCoeff=0.3200;MQ=27.64;MQ0=9;MQRankSum=0.635;QD=6.21;ReadPosRankSum=1.650;VQSLOD=0.5142;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,0:10:3.11:8,3,0	./.	0/0:25,0:1:3:0,3,29	0/0:17,0:3:9.03:0,9,135	1/1:8,1:9:2.11:10,2,0	0/1:8,0:8:1.80:2,0,10	0/1:11,0:10:18.42:38,0,18	1/1:17,0:16:39.46:267,39,0	1/1:9,2:11:2.64:16,3,0	1/1:7,2:9:8.57:87,9,0	./.	1/1:6,0:6:5.57:27,6,0	1/1:6,0:6:8.98:73,9,0	1/1:9,0:8:5.51:48,6,0	0/1:8,4:11:0:0,0,0	1/1:7,0:7:10.77:45,11,0	0/1:5,0:5:9.13:16,0,9	1/1:3,0:3:2.99:23,3,0	1/1:12,0:11:22.94:180,23,0	0/1:8,0:8:0.02:0,0,0	1/1:10,0:10:2.98:21,3,0	0/1:8,0:8:0:0,0,0	0/1:4,1:4:0:0,0,0	0/0:7,1:8:0.47:0,0,1	1/1:5,0:5:2.97:8,3,0	1/1:7,1:7:20.90:176,21,0	1/1:11,0:11:20.79:160,21,0	1/1:6,0:6:17.89:133,18,0
chr10	8694300	.	GTGTA	G	131.95	PASS	AB=0.981;AC=23;AF=0.442;AN=52;BaseQRankSum=2.178;DP=298;FS=3.125;HRun=0;HaplotypeScore=97.0627;InbreedingCoeff=0.2340;MQ=28.56;MQ0=9;MQRankSum=1.337;QD=0.71;ReadPosRankSum=-1.324;VQSLOD=1.7736;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:13,0:13:0.36:4,0,0	./.	1/1:25,0:1:2.04:6,2,0	0/1:17,0:3:14.17:14,0,23	1/1:12,0:12:2.97:10,3,0	0/1:9,0:9:3.22:3,0,3	0/1:13,0:12:5.42:43,0,5	0/0:21,0:20:48.01:0,48,335	1/1:14,0:14:2.66:15,3,0	0/1:9,0:9:77.83:78,0,115	./.	0/0:7,0:7:8.47:0,8,173	0/1:6,0:6:1.61:2,0,2	0/1:10,0:9:0.90:1,0,2	0/1:11,4:14:0:0,0,0	1/1:7,0:7:10.78:52,11,0	0/1:7,0:7:0.53:1,0,43	1/1:4,0:4:2.96:19,3,0	0/0:14,0:13:11.97:0,12,336	0/0:9,0:9:1.81:0,2,6	0/1:11,0:11:8.03:8,0,40	0/0:10,0:10:2.30:0,2,8	0/1:8,0:7:0:0,0,0	0/0:11,1:12:5.50:0,5,36	1/1:6,0:6:3.10:8,3,0	0/0:10,0:9:4.52:0,5,256	0/0:12,0:12:20.14:0,20,192	0/0:6,0:6:9.48:0,9,157
chr10	8694312	.	G	GTA	2201.30	PASS	AB=0.881;AC=34;AF=0.630;AN=54;BaseQRankSum=0.515;DP=407;FS=8.459;HRun=0;HaplotypeScore=120.8949;InbreedingCoeff=0.2927;MQ=33.30;MQ0=13;MQRankSum=-2.058;QD=7.62;ReadPosRankSum=1.892;VQSLOD=2.7165;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:18:1.08:61,1,0	./.	0/1:34,0:2:0.85:1,0,15	0/0:32,0:7:14.47:0,14,85	1/1:7,0:12:5.55:53,6,0	0/1:5,0:10:0:0,0,0	1/1:4,0:19:8.91:64,9,0	0/1:22,4:25:41.54:312,0,42	0/0:18,0:18:6.80:0,7,52	0/0:12,0:12:29.65:0,30,230	1/1:11,0:11:1.55:4,2,0	0/1:12,1:13:13.36:13,0,41	1/1:5,4:9:8.71:130,9,0	1/1:9,5:13:0.95:115,1,0	0/0:24,0:23:14.46:0,14,103	1/1:4,0:9:8.92:68,9,0	1/1:4,0:7:16.52:122,17,0	0/1:4,0:4:11.33:19,0,11	0/1:15,1:14:24.69:184,0,25	1/1:9,6:15:14.78:181,15,0	0/1:10,2:12:21.95:49,0,22	1/1:8,6:14:9.02:132,9,0	0/0:12,0:11:8.90:0,9,60	0/0:17,1:18:13.13:0,13,122	1/1:5,0:9:5.95:44,6,0	0/1:8,3:10:2.16:232,0,2	1/1:7,11:18:2.74:276,3,0	1/1:3,4:7:21.01:307,21,0
chr10	8696112	.	G	GGA	26039.24	PASS	AB=0.537;AC=39;AF=0.696;AN=56;BaseQRankSum=-18.691;DP=854;FS=2.083;HRun=0;HaplotypeScore=100.4712;InbreedingCoeff=0.9143;MQ=86.35;MQ0=3;MQRankSum=-4.308;QD=42.13;ReadPosRankSum=2.874;VQSLOD=6.5034;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,58:62:99:2682,154,0	1/1:1,6:8:15.05:263,15,0	0/0:25,0:25:63.18:0,63,817	0/0:33,0:33:77.99:0,78,1012	1/1:2,27:29:72.25:1251,72,0	1/1:3,23:26:60.21:1052,60,0	1/1:4,34:38:96.31:1652,96,0	1/1:5,24:29:72.25:1263,72,0	0/0:33,0:33:99:0,99,1320	0/0:27,0:27:81.27:0,81,1093	0/0:28,0:28:75.25:0,75,996	1/1:7,35:42:96.33:1684,96,0	1/1:4,30:34:84.29:1472,84,0	1/1:5,34:39:87.30:1525,87,0	0/0:41,0:41:99:0,105,1389	1/1:4,35:40:96.33:1684,96,0	1/1:0,33:33:87.30:1525,87,0	1/1:1,16:17:42.14:736,42,0	1/1:2,24:26:75.26:1308,75,0	1/1:7,30:37:81.28:1417,81,0	1/1:4,32:37:90.31:1577,90,0	1/1:4,25:30:69.24:1202,69,0	0/0:19,0:19:45.15:0,45,604	0/0:30,0:30:75.21:0,75,992	1/1:3,23:26:66.23:1156,66,0	0/1:3,18:22:18:908,0,18	1/1:4,25:29:62.79:1104,63,0	1/1:0,11:11:33.11:578,33,0
chr10	8696315	.	A	AG	269.08	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.281;DP=638;FS=1.004;HRun=4;HaplotypeScore=127.3010;InbreedingCoeff=0.7321;MQ=71.76;MQ0=2;MQRankSum=-0.297;QD=17.94;ReadPosRankSum=-2.460;VQSLOD=2.1807;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:4.08:0,4,199	0/0:6,0:6:6.37:0,6,41	0/0:24,0:19:44.42:0,44,451	0/0:44,0:35:58.04:0,58,632	0/0:17,0:17:32.04:0,32,184	0/0:17,0:17:29.18:0,29,185	0/0:21,0:21:43.46:0,43,271	0/0:15,0:15:30.03:0,30,324	0/0:29,0:29:81.20:0,81,887	0/0:24,0:24:69.12:0,69,754	0/0:16,0:16:48.13:0,48,533	0/0:40,0:40:99:0,114,1283	0/0:18,0:18:48.14:0,48,543	0/0:30,0:30:84.23:0,84,944	0/0:35,0:35:90.25:0,90,1010	0/0:28,0:28:60.89:0,61,360	1/1:9,6:15:33.03:363,33,0	0/0:22,0:22:19.10:0,19,186	0/0:16,0:16:45.13:0,45,509	0/0:22,0:22:57.14:0,57,632	0/0:25,0:25:60.17:0,60,675	0/0:22,0:22:51.13:0,51,566	0/0:22,0:22:60.17:0,60,680	0/0:34,0:34:84.24:0,84,952	0/0:15,0:15:34.61:0,35,195	0/0:31,0:31:78.22:0,78,881	0/0:24,0:24:72.21:0,72,816	0/0:2,0:2:6.02:0,6,68
chr10	8697493	.	A	AT	8657.19	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=16.785;DP=654;FS=0.306;HRun=7;HaplotypeScore=83.8604;InbreedingCoeff=0.9964;MQ=76.14;MQ0=0;MQRankSum=-0.758;QD=30.59;ReadPosRankSum=-0.752;VQSLOD=4.4320;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:81.05:0,81,765	0/0:9,0:9:21.03:0,21,203	0/0:17,0:17:32.95:0,33,300	0/0:10,0:10:21.03:0,21,202	0/0:30,0:30:78.07:0,78,737	0/0:35,0:34:99:0,102,973	0/0:16,0:16:48.06:0,48,457	1/1:7,34:41:99:1229,105,0	0/0:27,0:27:75.10:0,75,718	0/0:34,0:34:78.10:0,78,746	0/0:29,0:29:81.12:0,81,778	1/1:0,21:21:57.17:689,57,0	1/1:1,27:28:69.07:833,69,0	1/1:2,25:28:78.24:939,78,0	0/0:23,0:23:66.09:0,66,632	0/0:16,0:16:48.07:0,48,459	0/0:19,0:19:54.07:0,54,515	0/0:10,0:10:29.98:0,30,272	1/1:5,18:23:54.17:652,54,0	1/1:4,30:34:87.23:1035,87,0	1/1:0,12:12:33.10:399,33,0	1/1:2,27:29:75.19:890,75,0	0/0:16,0:16:36.05:0,36,347	0/0:16,0:16:48.07:0,48,459	0/0:33,0:33:96.15:0,96,927	1/1:1,24:25:72.22:869,72,0	1/1:6,31:37:78.24:942,78,0	1/1:1,4:5:15.05:181,15,0
chr10	8699769	.	A	AC	8686.45	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=17.649;DP=636;FS=2.582;HRun=0;HaplotypeScore=83.1595;InbreedingCoeff=0.9977;MQ=84.10;MQ0=0;MQRankSum=-2.687;QD=31.47;ReadPosRankSum=-0.244;VQSLOD=4.2678;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:96.32:0,96,1332	0/0:6,0:6:18.06:0,18,252	0/0:21,0:21:51.10:0,51,672	0/0:17,0:17:42.13:0,42,558	0/0:27,0:27:81.27:0,81,1130	0/0:15,0:15:45.15:0,45,629	0/0:16,0:15:48.15:0,48,654	1/1:3,41:44:99:1453,122,0	0/0:17,0:17:51.17:0,51,713	0/0:26,0:26:75.25:0,75,1049	0/0:17,0:17:51.17:0,51,713	1/1:3,24:27:67.23:811,67,0	1/1:2,21:23:61.80:751,62,0	1/1:5,24:29:74.60:864,75,0	0/0:21,0:21:63.21:0,63,879	0/0:21,0:21:60.18:0,60,807	0/0:31,0:31:93.29:0,93,1281	0/0:22,0:22:60.18:0,60,812	1/1:3,21:24:38.38:631,38,0	1/1:2,32:34:84.64:1024,85,0	1/1:1,14:15:41.68:508,42,0	1/1:1,20:21:54.14:646,54,0	0/0:26,0:26:75.25:0,75,1045	0/0:19,0:19:57.19:0,57,795	0/0:26,0:26:78.26:0,78,1091	1/1:3,18:21:56.45:680,56,0	1/1:1,31:32:89.85:1100,90,0	1/1:0,6:6:18.06:218,18,0
chr10	8706383	.	G	GCACA	4601.26	PASS	AB=0.882;AC=44;AF=0.815;AN=54;BaseQRankSum=-0.168;DP=759;FS=2.718;HRun=0;HaplotypeScore=169.2903;InbreedingCoeff=0.5349;MQ=68.21;MQ0=21;MQRankSum=-3.106;QD=7.59;ReadPosRankSum=-2.246;VQSLOD=3.9987;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:36,0:33:2.94:62,3,0	1/1:9,0:9:3.01:54,3,0	1/1:41,0:25:0.89:2,1,0	./.	1/1:29,0:28:2.69:71,3,0	1/1:20,0:19:5.98:104,6,0	1/1:36,0:35:8.96:91,9,0	1/1:23,0:23:18.06:275,18,0	1/1:8,1:23:24.97:169,25,0	0/0:26,0:29:16.21:0,16,215	0/0:20,0:22:26.86:0,27,404	1/1:16,17:34:26.83:582,27,0	1/1:16,8:28:20.27:322,20,0	1/1:13,12:30:4.62:547,5,0	0/0:34,0:39:50.37:0,50,977	1/1:17,1:21:6:104,6,0	1/1:21,0:19:11.89:125,12,0	1/1:12,0:14:8.96:123,9,0	0/1:9,3:13:32.07:185,0,32	1/1:15,11:33:23.55:428,24,0	1/1:37,0:33:15.02:225,15,0	1/1:9,5:14:9.03:213,9,0	0/0:19,0:22:24.07:0,24,353	0/1:36,0:40:2.83:3,0,837	1/1:22,1:30:3:53,3,0	1/1:27,0:39:36.09:567,36,0	1/1:15,1:26:9.03:164,9,0	1/1:6,0:6:6.02:133,6,0
chr10	8708214	.	ATCG	A	5208.03	PASS	AB=1.000;AC=39;AF=0.696;AN=56;BaseQRankSum=3.531;DP=606;FS=2.210;HRun=0;HaplotypeScore=107.2824;InbreedingCoeff=0.0819;MQ=75.36;MQ0=2;MQRankSum=0.637;QD=10.00;ReadPosRankSum=-2.595;VQSLOD=4.2790;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:25:99:120,0,151	0/1:14,0:14:14.79:15,0,180	0/0:16,0:14:24.17:0,24,297	0/0:27,0:25:45.34:0,45,393	0/1:19,0:19:9.96:10,0,156	0/1:25,0:25:99:187,0,127	0/1:26,0:26:22.12:22,0,265	1/1:27,0:27:74.75:610,75,0	0/0:42,0:42:99:0,113,1174	0/1:11,0:11:29.08:130,0,29	1/1:12,0:11:25.39:202,25,0	1/1:0,21:21:18.06:305,18,0	1/1:1,28:29:30.10:508,30,0	1/1:0,24:24:18.06:305,18,0	1/1:32,2:34:44.27:420,44,0	0/1:37,0:36:49.08:49,0,356	0/1:23,0:23:67.61:68,0,201	0/1:17,0:16:20.35:20,0,139	1/1:1,10:11:27.02:291,27,0	1/1:0,21:21:27.02:382,27,0	1/1:0,32:32:18.06:305,18,0	1/1:0,10:10:6.02:102,6,0	1/1:9,0:9:14.98:124,15,0	0/1:17,0:17:4.49:54,0,4	0/1:12,0:12:42.17:42,0,55	1/1:0,18:18:53.04:481,53,0	1/1:3,33:36:14.80:221,15,0	1/1:1,10:11:15.05:233,15,0
chr10	8708217	.	GTCA	G	3580.52	PASS	AB=0.979;AC=37;AF=0.740;AN=50;BaseQRankSum=-5.142;DP=601;FS=17.423;HRun=0;HaplotypeScore=111.7158;InbreedingCoeff=0.4050;MQ=71.18;MQ0=2;MQRankSum=3.280;QD=7.94;ReadPosRankSum=1.727;VQSLOD=2.0870;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:8,13:22:33.07:407,33,0	1/1:11,3:14:9.03:116,9,0	./.	./.	1/1:10,7:17:11.92:115,12,0	1/1:7,18:25:41.82:541,42,0	1/1:15,10:25:15.05:193,15,0	./.	0/0:24,0:44:45.13:0,45,571	0/0:11,0:11:9.03:0,9,114	0/0:14,0:13:3.44:0,3,21	1/1:21,0:21:18:158,18,0	1/1:28,0:28:30.01:267,30,0	1/1:24,0:24:18:157,18,0	0/1:38,0:38:24.32:24,0,48	1/1:19,17:35:23.81:309,24,0	1/1:14,10:24:21.07:265,21,0	0/1:15,2:15:8.83:86,0,9	1/1:10,0:10:8.94:66,9,0	1/1:21,0:21:23.88:189,24,0	1/1:32,0:32:18:158,18,0	0/1:11,0:11:14.97:43,0,15	1/1:8,0:8:1.25:3,1,0	0/0:19,0:19:17.82:0,18,124	1/1:5,6:11:15.05:193,15,0	0/1:21,0:21:44.92:76,0,45	1/1:33,0:33:11.68:105,12,0	0/1:13,0:13:4.50:108,0,4
chr10	8708259	.	A	ATCTTCT	2014.93	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=10.000;DP=680;FS=0.000;HRun=0;HaplotypeScore=176.2206;InbreedingCoeff=0.9796;MQ=62.31;MQ0=7;MQRankSum=-9.723;QD=16.52;ReadPosRankSum=-1.594;VQSLOD=2.3897;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:81.28:0,81,1322	0/0:11,0:11:33.10:0,33,527	0/0:16,0:14:27.53:0,28,602	0/0:23,0:15:41.53:0,42,714	0/0:23,0:22:54.18:0,54,843	0/0:30,0:29:70.63:0,71,1178	0/0:25,0:25:54.15:0,54,848	0/0:24,0:20:60.13:0,60,992	0/0:38,0:38:91.96:0,92,963	1/1:21,0:21:57.18:780,57,0	1/1:2,20:22:8.99:172,9,0	0/0:27,0:27:57.17:0,57,996	0/0:25,0:25:54.18:0,54,1024	0/0:27,0:26:45.14:0,45,797	1/1:4,34:44:14.39:377,14,0	0/0:39,0:39:81.69:0,82,1262	0/0:30,0:30:67.77:0,68,1045	0/0:17,0:15:32.90:0,33,437	0/0:12,0:12:36.11:0,36,605	0/0:27,0:27:72.14:0,72,1136	0/0:31,0:31:45.11:0,45,791	0/0:20,0:20:44.74:0,45,764	1/1:12,0:12:22.16:238,22,0	1/1:2,18:21:21.04:618,21,0	0/0:18,0:18:51.17:0,51,856	0/0:20,0:20:54:0,54,923	0/0:28,0:28:51.12:0,51,807	0/0:15,0:15:30.10:0,30,505
chr10	8709452	.	CCT	C	1146.90	PASS	AB=0.885;AC=11;AF=0.196;AN=56;BaseQRankSum=11.935;DP=675;FS=19.984;HRun=0;HaplotypeScore=124.1045;InbreedingCoeff=-0.2522;MQ=58.67;MQ0=5;MQRankSum=-9.323;QD=5.10;ReadPosRankSum=-0.223;VQSLOD=1.3215;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,99,1926	0/0:14,0:14:42.14:0,42,850	0/0:43,2:30:83.72:0,84,1471	0/0:34,1:18:47.82:0,48,797	0/0:44,0:44:99:0,129,2538	0/0:23,0:23:69.24:0,69,1381	0/0:20,0:20:60.21:0,60,1215	0/0:31,2:32:45.25:0,45,1663	0/0:28,0:28:84.27:0,84,1611	0/1:23,1:26:22.68:23,0,1247	0/0:25,0:25:33.07:0,33,996	0/1:13,3:17:99:119,0,739	0/1:12,6:18:99:232,0,624	0/1:13,1:18:99:104,0,693	0/0:20,0:20:3.16:0,3,457	0/0:20,0:20:60.21:0,60,1213	0/0:31,0:31:90.26:0,90,1677	0/0:14,0:14:42.09:0,42,798	0/1:14,0:16:13.55:14,0,710	0/1:30,4:38:99:144,0,1535	0/0:13,1:14:36.10:0,36,729	0/1:14,1:20:99:124,0,764	0/1:11,1:17:99:104,0,621	0/0:21,1:23:29.91:0,30,985	0/0:25,0:24:75.26:0,75,1504	0/1:19,6:24:99:196,0,985	0/1:13,4:17:99:128,0,696	0/1:9,3:12:99:106,0,422
chr10	8709460	.	T	TCC	3809.79	PASS	AB=0.778;AC=16;AF=0.286;AN=56;BaseQRankSum=10.836;DP=711;FS=27.507;HRun=0;HaplotypeScore=122.6455;InbreedingCoeff=-0.3951;MQ=58.03;MQ0=11;MQRankSum=-8.488;QD=10.52;ReadPosRankSum=0.631;VQSLOD=1.6331;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:93.30:0,93,1479	0/0:15,0:15:42.14:0,42,683	0/0:52,0:30:78.69:0,79,1198	0/0:32,0:16:39.09:0,39,569	0/0:45,0:45:99:0,135,2128	0/0:25,0:25:75.24:0,75,1195	0/0:23,0:23:69.23:0,69,1098	0/1:25,6:30:99:189,0,1010	0/0:31,0:31:93.30:0,93,1485	0/1:21,4:25:99:169,0,828	0/1:13,1:30:33.47:33,0,623	0/1:14,8:22:99:256,0,465	0/1:11,6:17:99:368,0,360	0/1:14,8:22:99:376,0,401	0/1:8,0:25:38.42:38,0,245	0/0:21,0:21:63.22:0,63,1025	0/0:32,0:32:87.30:0,87,1394	0/0:15,0:15:44.98:0,45,669	0/1:17,2:19:99:344,0,435	0/1:29,10:38:99:513,0,965	0/1:13,1:14:7.83:8,0,469	0/1:13,6:19:99:372,0,473	0/1:11,8:18:99:255,0,466	0/1:22,2:24:53.37:53,0,640	0/0:26,0:25:78.27:0,78,1268	0/1:17,6:22:99:349,0,585	0/1:13,7:21:99:327,0,458	0/1:8,3:11:99:160,0,172
chr10	8709678	.	CA	C	3100.78	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=15.064;DP=657;FS=4.321;HRun=1;HaplotypeScore=97.0256;InbreedingCoeff=0.9997;MQ=79.32;MQ0=0;MQRankSum=-2.316;QD=29.82;ReadPosRankSum=3.036;VQSLOD=3.5267;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,123,1930	0/0:10,0:10:30.10:0,30,472	0/0:25,0:25:69.60:0,70,1008	0/0:24,0:24:68.85:0,69,1028	0/0:31,0:31:89.96:0,90,1365	0/0:16,0:16:48.15:0,48,734	0/0:23,0:23:69.22:0,69,1073	0/0:26,0:26:72.24:0,72,1130	0/0:24,0:24:72.23:0,72,1127	1/1:0,29:29:86:985,86,0	1/1:1,20:21:48.11:556,48,0	0/0:23,0:23:69.22:0,69,1079	0/0:20,0:20:60.20:0,60,957	0/0:21,0:21:63.21:0,63,995	1/1:1,27:28:78.24:930,78,0	0/0:32,0:32:96.33:0,96,1532	0/0:26,0:26:75.23:0,75,1149	0/0:12,0:12:33.11:0,33,516	0/0:21,0:21:63.20:0,63,953	0/0:26,0:26:75.22:0,75,1105	0/0:27,0:27:81.24:0,81,1244	0/0:20,0:20:57.06:0,57,870	1/1:0,14:14:40.64:447,41,0	1/1:0,12:12:30.09:358,30,0	0/0:31,0:30:93.32:0,93,1476	0/0:29,0:29:87.22:0,87,1326	0/0:29,0:29:87.23:0,87,1353	0/0:15,0:15:45.15:0,45,699
chr10	8710881	.	ATT	A	9610.39	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=-12.693;DP=571;FS=1.917;HRun=12;HaplotypeScore=81.0394;InbreedingCoeff=0.9424;MQ=66.27;MQ0=2;MQRankSum=-1.065;QD=21.69;ReadPosRankSum=3.034;VQSLOD=4.7373;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,23:28:65.85:652,66,0	1/1:2,9:11:24.04:244,24,0	0/0:9,0:9:21.03:0,21,216	0/0:6,0:5:2.01:0,2,23	1/1:5,26:31:75.02:750,75,0	1/1:3,14:17:35.22:365,35,0	1/1:2,12:14:27.05:275,27,0	1/1:5,20:26:50.72:550,51,0	1/1:1,8:9:20.56:213,21,0	0/0:3,1:26:12.91:0,13,131	0/0:6,1:24:15.48:0,15,143	1/1:2,15:17:32.96:336,33,0	1/1:6,20:25:57.09:579,57,0	1/1:5,18:23:40.14:478,40,0	0/0:3,0:18:33.35:0,33,116	1/1:6,22:28:54.08:549,54,0	1/1:3,18:21:42.06:427,42,0	1/1:1,10:11:18.04:183,18,0	1/1:5,16:21:48.04:487,48,0	1/1:0,36:36:86.87:932,87,0	1/1:1,13:15:32.79:317,33,0	1/1:3,19:22:47.01:499,47,0	0/0:7,1:27:14.79:0,15,118	0/0:2,0:18:35.45:0,35,159	1/1:3,24:27:57.11:580,57,0	1/1:7,18:27:53.50:564,54,0	1/1:3,23:27:44.82:510,45,0	1/1:1,4:5:12.03:122,12,0
chr10	8711890	.	G	GT	162.72	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.978;DP=651;FS=5.273;HRun=1;HaplotypeScore=136.3619;InbreedingCoeff=0.8895;MQ=78.41;MQ0=0;MQRankSum=-2.259;QD=10.17;ReadPosRankSum=-0.757;VQSLOD=1.2499;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:43.29:0,43,194	0/0:7,0:7:16.30:0,16,54	0/0:37,0:37:97.97:0,98,1301	0/0:19,0:19:32.04:0,32,523	0/0:24,0:24:30.69:0,31,109	0/0:30,0:30:32.59:0,33,161	0/0:23,0:23:46.34:0,46,197	0/0:44,0:44:99:0,120,1575	1/1:8,7:16:19.60:254,20,0	0/0:32,0:32:96.28:0,96,1280	0/0:20,0:20:54.17:0,54,725	0/0:32,0:32:93.24:0,93,1183	0/0:27,0:27:81.25:0,81,1095	0/0:25,0:25:72.22:0,72,968	0/0:36,0:36:99:0,108,1482	0/0:18,0:18:44.02:0,44,186	0/0:8,0:8:10.54:0,11,58	0/0:11,0:11:21.69:0,22,115	0/0:27,0:27:80.57:0,81,1009	0/0:24,0:24:72.22:0,72,969	0/0:23,0:23:69.20:0,69,906	0/0:26,0:26:78.26:0,78,1085	0/0:21,0:21:60.20:0,60,834	0/0:20,0:20:60.19:0,60,818	0/0:26,0:26:52.39:0,52,184	0/0:23,0:23:69.22:0,69,950	0/0:25,0:24:75.25:0,75,1021	0/0:3,0:3:9.03:0,9,126
chr10	8711895	.	G	GGGGGA	7526.83	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=17.100;DP=651;FS=6.980;HRun=0;HaplotypeScore=149.0348;InbreedingCoeff=0.9742;MQ=78.07;MQ0=0;MQRankSum=-16.192;QD=40.25;ReadPosRankSum=2.075;VQSLOD=4.8021;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,0:22:48.08:826,48,0	1/1:0,0:8:21.07:406,21,0	0/0:35,0:35:87.60:0,88,1918	0/0:20,0:20:8.48:0,8,700	1/1:2,0:25:38.34:706,38,0	1/1:0,0:27:66.22:1242,66,0	1/1:1,0:22:48.10:885,48,0	0/0:44,0:44:99:0,129,2465	1/1:1,10:23:32.26:823,32,0	0/0:31,0:31:93.32:0,93,1969	0/0:22,0:22:56.53:0,57,1078	0/0:30,0:30:87.26:0,87,1684	0/0:26,0:26:78.25:0,78,1596	0/0:24,0:24:72.20:0,72,1400	0/0:36,0:36:99:0,108,2244	1/1:0,0:15:45.15:874,45,0	1/1:1,0:10:12.04:212,12,0	1/1:0,0:6:15.05:292,15,0	0/0:27,0:27:78.20:0,78,1501	0/0:23,0:23:69.22:0,69,1408	0/0:23,0:23:66.18:0,66,1304	0/0:27,0:27:78.25:0,78,1618	0/0:22,0:22:66.20:0,66,1321	0/0:22,0:22:63.18:0,63,1233	1/1:1,0:29:66.23:1261,66,0	0/0:22,0:22:66.23:0,66,1402	0/0:27,0:25:81.24:0,81,1637	0/0:3,0:3:9.03:0,9,191
chr10	8713811	.	G	GACACACAGACACAC	2691.05	PASS	AB=0.987;AC=21;AF=0.375;AN=56;BaseQRankSum=12.118;DP=637;FS=2.705;HRun=0;HaplotypeScore=272.4416;InbreedingCoeff=-0.4682;MQ=62.29;MQ0=3;MQRankSum=-6.062;QD=6.19;ReadPosRankSum=-5.376;VQSLOD=1.5249;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:0.53:0,1,754	0/1:7,0:7:25.95:26,0,189	0/0:38,0:34:78.20:0,78,1676	0/0:32,0:23:60.07:0,60,1170	0/1:28,0:27:53.11:53,0,555	0/1:28,0:28:99:198,0,482	0/1:34,0:34:9.05:9,0,1038	0/0:27,0:26:34.10:0,34,1082	1/1:3,15:25:12.04:600,12,0	0/1:21,0:21:99:294,0,611	0/0:20,0:20:7.35:0,7,515	0/1:19,0:19:89:89,0,459	0/1:17,0:17:99:361,0,250	0/1:26,0:25:99:128,0,701	0/0:19,0:19:22.11:0,22,596	0/1:22,0:22:6.69:7,0,665	0/1:14,0:14:99:208,0,296	0/1:11,0:11:73:73,0,257	0/1:24,0:24:8.03:8,0,838	0/1:15,0:22:75.08:75,0,477	0/1:33,0:32:49.06:49,0,546	0/1:19,0:19:7.20:7,0,791	0/1:14,0:14:99:218,0,359	0/0:29,0:29:7.65:0,8,807	0/1:20,0:18:22.31:22,0,203	0/1:26,0:26:99:108,0,732	0/1:25,0:24:99:316,0,567	0/0:3,0:3:9.03:0,9,147
chr10	8713821	.	A	AACACACACACAC	7488.09	PASS	AB=1.000;AC=53;AF=0.981;AN=54;BaseQRankSum=-4.909;DP=647;FS=0.000;HRun=0;HaplotypeScore=214.8802;InbreedingCoeff=0.1644;MQ=54.22;MQ0=9;MQRankSum=3.115;QD=12.10;ReadPosRankSum=4.215;VQSLOD=3.5123;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:32,0:32:7.53:192,8,0	1/1:7,0:7:6.01:83,6,0	0/1:32,0:27:0:0,0,0	./.	1/1:29,0:28:23.19:381,23,0	1/1:28,0:28:29:421,29,0	1/1:36,0:36:28.65:464,29,0	1/1:32,0:30:14.83:283,15,0	1/1:18,0:18:12.04:468,12,0	1/1:20,0:20:18:338,18,0	1/1:17,0:17:9.01:198,9,0	1/1:20,0:20:23.99:332,24,0	1/1:13,1:15:22.88:559,23,0	1/1:25,0:25:17.73:330,18,0	1/1:19,0:19:11.14:112,11,0	1/1:14,0:21:3.01:116,3,0	1/1:11,6:19:6.36:190,6,0	1/1:6,9:18:9.03:421,9,0	1/1:20,0:20:8.95:70,9,0	1/1:25,1:26:11.25:231,11,0	1/1:34,0:31:20.96:329,21,0	1/1:22,0:22:15.49:247,15,0	1/1:10,5:17:4.45:328,4,0	1/1:30,0:30:17.32:155,17,0	1/1:22,0:19:13.46:195,13,0	1/1:28,0:28:34.44:534,34,0	1/1:25,0:24:31.35:464,31,0	1/1:5,0:5:5.98:47,6,0
chr10	8716041	.	A	AT	2709.10	PASS	AB=0.673;AC=19;AF=0.339;AN=56;BaseQRankSum=-13.133;DP=548;FS=0.841;HRun=13;HaplotypeScore=107.3025;InbreedingCoeff=0.5908;MQ=60.63;MQ0=8;MQRankSum=4.117;QD=10.71;ReadPosRankSum=-2.282;VQSLOD=2.5149;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:3,0:20:36.67:0,37,108	0/0:1,0:8:12.21:0,12,36	0/1:10,0:8:1.67:2,0,31	0/0:8,0:4:2.92:0,3,20	0/0:2,0:26:35.06:0,35,103	0/0:2,0:27:52.10:0,52,156	0/0:11,0:23:22.35:0,22,65	1/1:17,13:28:22.29:330,22,0	0/0:3,0:16:24.43:0,24,72	0/0:5,0:19:34.31:0,34,101	0/0:1,0:18:32.57:0,33,95	1/1:9,7:16:22.60:207,23,0	0/1:7,16:23:8.08:218,0,8	1/1:2,9:11:0.70:147,1,0	0/0:1,0:20:35.87:0,36,105	0/0:1,0:17:32.59:0,33,96	0/0:1,0:24:37.74:0,38,112	0/0:2,0:11:21.08:0,21,66	0/1:11,10:19:34.39:266,0,34	1/1:10,20:31:41.11:504,41,0	0/1:4,13:17:14.17:160,0,14	1/1:10,10:21:29.87:263,30,0	0/0:1,0:17:30.55:0,31,89	0/0:2,0:16:28.51:0,29,84	0/0:7,0:21:34.95:0,35,104	1/1:13,15:28:6.86:298,7,0	1/1:5,21:26:38.20:383,38,0	0/1:2,14:15:2.56:121,0,3
chr10	8716094	.	TGCGCTCGCTAGGCAA	T	11861.97	PASS	AB=0.615;AC=17;AF=0.327;AN=52;BaseQRankSum=13.748;DP=427;FS=0.446;HRun=0;HaplotypeScore=204.8594;InbreedingCoeff=0.8911;MQ=46.89;MQ0=11;MQRankSum=-11.881;QD=82.37;ReadPosRankSum=2.711;VQSLOD=4.2715;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,13:20:30.06:1202,30,0	1/1:2,7:9:21.07:920,21,0	./.	./.	1/1:8,12:20:36.08:1285,36,0	1/1:7,16:23:48.16:2103,48,0	1/1:5,13:18:27.09:1183,27,0	0/0:21,0:21:42.14:0,42,2390	0/0:22,0:22:60.21:0,60,4273	0/0:16,0:16:42.14:0,42,2791	0/0:11,0:11:30.10:0,30,2027	0/0:10,0:10:27.09:0,27,1886	0/0:18,0:18:42.14:0,42,2995	0/0:8,0:8:21.07:0,21,1550	0/0:26,0:25:60.21:0,60,4193	1/1:3,10:13:33.11:1356,33,0	0/1:6,10:16:99:1203,0,102	1/1:4,6:10:18.06:771,18,0	0/0:22,0:22:48.16:0,48,3074	0/0:25,0:24:51.18:0,51,3579	0/0:9,0:9:21.07:0,21,1444	0/0:9,0:9:21.07:0,21,1342	0/0:18,0:18:39.13:0,39,2792	0/0:14,0:14:39.13:0,39,2690	1/1:1,14:15:42.14:1839,42,0	0/0:21,0:20:60.21:0,60,4254	0/0:16,0:16:39.13:0,39,2731	0/0:6,0:5:6.02:0,6,421
chr10	8717627	.	T	TA	1453.25	PASS	AB=0.888;AC=14;AF=0.250;AN=56;BaseQRankSum=11.810;DP=535;FS=0.000;HRun=9;HaplotypeScore=105.5271;InbreedingCoeff=0.4303;MQ=69.40;MQ0=1;MQRankSum=-1.411;QD=7.61;ReadPosRankSum=-7.555;VQSLOD=-0.0531;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:13,6:19:29.99:295,30,0	0/0:8,0:8:16.29:0,16,84	0/0:19,0:14:26.93:0,27,226	0/0:11,0:6:2.40:0,2,25	1/1:19,9:28:16.66:322,17,0	1/1:17,9:26:17.74:344,18,0	0/1:10,5:14:3.49:165,0,3	0/0:17,0:17:32.94:0,33,278	0/0:13,0:13:4.08:0,4,99	0/0:29,0:29:7.56:0,8,336	0/0:29,0:29:7.76:0,8,336	0/0:15,0:15:11.96:0,12,190	0/0:24,0:24:20.48:0,20,332	0/0:16,0:16:23.40:0,23,229	0/0:16,0:16:41.97:0,42,364	1/1:14,8:22:6.17:306,6,0	0/1:22,1:23:22.96:23,0,95	0/1:7,8:14:3.36:114,0,3	0/0:8,0:8:11.99:0,12,104	0/0:28,1:29:1.98:0,2,450	0/1:9,0:9:1.71:2,0,64	0/0:13,0:13:19.12:0,19,224	0/0:36,0:36:21.19:0,21,399	0/0:19,0:19:50.99:0,51,443	0/1:27,1:28:44.43:44,0,114	0/0:17,0:17:23.28:0,23,249	0/0:25,0:25:47.31:0,47,433	0/1:6,0:6:1.12:1,0,42
chr10	8717633	.	A	AAAAG	3727.38	PASS	AB=0.803;AC=27;AF=0.540;AN=50;BaseQRankSum=-4.976;DP=557;FS=15.672;HRun=0;HaplotypeScore=135.8686;InbreedingCoeff=0.5786;MQ=65.91;MQ0=2;MQRankSum=-0.021;QD=12.26;ReadPosRankSum=-2.127;VQSLOD=1.8116;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:3.28:0,3,166	0/0:9,0:9:6:0,6,54	./.	./.	0/0:28,0:28:21.43:0,21,184	0/0:29,0:29:21.01:0,21,187	0/0:14,0:13:5.03:0,5,30	./.	1/1:10,0:13:3.01:63,3,0	0/1:17,12:30:0.02:678,0,0	0/1:16,10:27:11.49:595,0,11	1/1:10,1:18:5.12:150,5,0	1/1:15,9:25:18.06:411,18,0	1/1:12,4:18:3.01:68,3,0	0/0:18,0:18:36.08:0,36,454	0/0:21,0:21:17.98:0,18,155	0/0:22,0:22:12.01:0,12,111	0/1:16,0:14:43.56:47,0,44	1/1:6,2:10:15.03:231,15,0	1/1:22,4:35:20.96:287,21,0	1/1:8,0:8:6.02:125,6,0	1/1:10,3:14:6.02:109,6,0	1/1:17,15:33:25.02:550,25,0	0/0:24,0:24:27.67:0,28,362	0/0:24,0:24:11.97:0,12,114	1/1:12,6:23:20.87:257,21,0	1/1:19,3:26:3.01:52,3,0	1/1:5,0:8:6.02:104,6,0
chr10	8717636	.	AG	A	2720.38	PASS	AB=0.944;AC=20;AF=0.357;AN=56;BaseQRankSum=8.669;DP=556;FS=0.000;HRun=1;HaplotypeScore=99.5119;InbreedingCoeff=0.8469;MQ=62.24;MQ0=2;MQRankSum=-0.921;QD=13.02;ReadPosRankSum=-5.773;VQSLOD=0.2847;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:21,2:23:55.15:439,55,0	1/1:8,1:9:3.10:70,3,0	0/0:15,0:10:26.99:0,27,294	0/1:7,1:3:6.96:7,0,30	1/1:18,10:28:68.92:544,69,0	1/1:25,4:29:70.18:542,70,0	1/1:12,4:15:29.65:233,30,0	0/0:14,0:14:33.06:0,33,370	0/1:12,0:12:1.35:1,0,54	0/0:29,0:29:87.01:0,87,886	0/0:26,0:26:71.93:0,72,749	0/0:20,0:20:41.89:0,42,417	0/0:24,0:24:60.06:0,60,650	0/0:17,0:17:33.07:0,33,375	0/0:17,0:17:48.10:0,48,589	1/1:17,3:20:44.54:411,45,0	1/1:18,5:24:15.07:295,15,0	1/1:14,2:15:8.66:131,9,0	0/0:9,0:9:24.92:0,25,256	0/0:37,0:37:87.67:0,88,963	0/0:10,0:10:23.87:0,24,221	0/0:15,0:15:32.98:0,33,369	0/0:33,0:33:77.27:0,77,786	0/0:24,0:24:69.93:0,70,772	1/1:20,4:24:24.26:252,24,0	0/0:21,0:21:59.72:0,60,601	0/0:27,0:27:60.09:0,60,666	0/0:9,0:9:17.94:0,18,168
chr10	8717638	.	AAAG	A	2684.16	PASS	AB=0.942;AC=12;AF=0.214;AN=56;BaseQRankSum=7.918;DP=559;FS=4.239;HRun=0;HaplotypeScore=119.1038;InbreedingCoeff=0.3497;MQ=60.31;MQ0=2;MQRankSum=-0.193;QD=14.20;ReadPosRankSum=-4.132;VQSLOD=2.1863;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:23:12.29:465,0,12	0/1:8,1:9:32.62:33,0,63	0/0:13,0:8:17.91:0,18,186	0/0:8,0:3:3:0,3,36	1/1:27,1:28:41.70:630,42,0	1/1:29,0:29:37.06:590,37,0	0/1:16,0:15:15.05:199,0,15	0/0:15,0:13:33.06:0,33,379	0/0:13,0:13:29.54:0,30,354	0/0:30,0:30:90.29:0,90,1465	0/0:26,0:26:75.24:0,75,1146	0/0:20,0:20:45.09:0,45,650	0/0:24,0:24:57.18:0,57,865	0/0:18,0:18:30.09:0,30,460	0/0:17,0:17:51.17:0,51,999	1/1:18,1:19:18.50:468,19,0	0/1:21,3:24:80.12:158,0,80	0/1:16,0:14:33.93:195,0,34	0/0:9,0:9:25.33:0,25,431	0/0:38,0:38:96.21:0,96,1522	0/0:10,0:10:24.08:0,24,394	0/0:16,0:16:33.06:0,33,544	0/0:32,0:32:70.58:0,71,963	0/0:24,0:24:69.70:0,70,1220	0/1:21,0:25:99:113,0,108	0/0:21,0:21:58.26:0,58,1045	0/0:27,0:27:60.17:0,60,858	0/0:9,0:9:24.08:0,24,399
chr10	8717639	.	AAG	A	1840.75	PASS	AB=0.958;AC=12;AF=0.214;AN=56;BaseQRankSum=9.107;DP=562;FS=7.219;HRun=0;HaplotypeScore=111.8826;InbreedingCoeff=0.3385;MQ=60.12;MQ0=2;MQRankSum=0.837;QD=9.74;ReadPosRankSum=-4.610;VQSLOD=1.6451;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:22,2:24:22.97:324,0,23	0/1:9,0:9:31.83:32,0,69	0/0:13,0:8:18.03:0,18,216	0/0:8,0:3:3:0,3,42	1/1:21,7:28:36.68:443,37,0	1/1:26,3:29:34.81:421,35,0	0/1:14,1:14:28.04:148,0,28	0/0:17,0:13:38.33:0,38,454	0/0:13,0:13:29.67:0,30,341	0/0:30,0:30:90.29:0,90,1344	0/0:26,0:26:75.25:0,75,1090	0/0:20,0:20:45.15:0,45,661	0/0:25,0:25:60.18:0,60,849	0/0:18,0:18:29.68:0,30,426	0/0:17,0:17:51.17:0,51,891	1/1:18,2:20:18.17:350,18,0	0/1:24,0:24:99:133,0,128	0/1:14,2:15:62.20:84,0,62	0/0:9,0:9:26.92:0,27,410	0/0:38,0:38:99:0,99,1526	0/0:10,0:10:24.08:0,24,374	0/0:15,0:15:33.11:0,33,525	0/0:32,0:32:70.50:0,71,933	0/0:24,0:24:69.70:0,70,1146	0/1:24,0:24:74.12:74,0,134	0/0:21,0:21:58.26:0,58,938	0/0:26,0:26:60.09:0,60,896	0/0:11,0:11:27.07:0,27,396
chr10	8717640	.	AG	A	1794.28	PASS	AB=0.972;AC=12;AF=0.214;AN=56;BaseQRankSum=9.447;DP=555;FS=3.442;HRun=1;HaplotypeScore=100.9361;InbreedingCoeff=0.3290;MQ=58.22;MQ0=2;MQRankSum=0.166;QD=9.65;ReadPosRankSum=-4.757;VQSLOD=-0.4472;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:25:13.99:366,0,14	0/1:8,0:8:28:28,0,96	0/0:12,0:7:18.04:0,18,217	0/0:7,0:2:3.01:0,3,44	1/1:27,2:29:32.88:449,33,0	1/1:26,1:27:26.59:392,27,0	0/1:12,3:14:29.33:123,0,29	0/0:18,0:13:39.08:0,39,504	0/0:13,0:13:29.82:0,30,315	0/0:30,0:30:90.21:0,90,1166	0/0:26,0:26:75.20:0,75,958	0/0:20,0:20:45.12:0,45,596	0/0:25,0:25:60.14:0,60,747	0/0:16,0:16:29.68:0,30,391	0/0:17,0:17:51.17:0,51,767	1/1:20,0:20:8.97:325,9,0	0/1:22,0:22:99:118,0,155	0/1:16,0:14:78.90:93,0,79	0/0:9,0:9:27.05:0,27,369	0/0:38,0:38:99:0,99,1389	0/0:10,0:10:24.07:0,24,336	0/0:15,0:15:36.09:0,36,485	0/0:31,0:31:71.43:0,71,839	0/0:24,0:24:70.09:0,70,994	0/1:24,0:24:65.44:65,0,171	0/0:21,0:21:59.84:0,60,813	0/0:26,0:26:60.20:0,60,855	0/0:11,0:11:26.92:0,27,299
chr10	8719178	.	G	GA	6454.60	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-14.739;DP=609;FS=1.495;HRun=5;HaplotypeScore=57.0883;InbreedingCoeff=0.9902;MQ=86.30;MQ0=0;MQRankSum=-3.390;QD=32.76;ReadPosRankSum=3.904;VQSLOD=5.3446;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,24:26:69.22:908,69,0	1/1:1,7:8:21.07:276,21,0	0/0:20,0:20:51.12:0,51,546	0/0:20,0:20:46.92:0,47,477	1/1:5,15:20:51.16:657,51,0	1/1:3,20:23:57.19:750,57,0	1/1:4,17:21:48.16:632,48,0	0/0:33,0:33:81.20:0,81,869	0/0:24,0:24:63.16:0,63,676	0/0:23,0:23:63.11:0,63,652	0/0:17,0:17:45.11:0,45,484	0/0:18,0:18:48.11:0,48,507	0/0:24,0:24:66.10:0,66,696	0/0:20,0:20:54.13:0,54,580	0/0:18,0:18:45.08:0,45,467	1/1:1,24:25:63.20:829,63,0	1/1:6,21:27:60.20:790,60,0	1/1:3,16:19:45.15:587,45,0	0/0:29,0:29:81.20:0,81,870	0/0:26,0:26:78.20:0,78,838	0/0:24,0:24:66.17:0,66,709	0/0:31,0:31:90.21:0,90,959	0/0:20,0:20:54.14:0,54,579	0/0:14,0:14:36.09:0,36,387	1/1:1,27:28:78.25:1026,78,0	0/0:18,0:18:54.14:0,54,580	0/0:30,0:28:87.17:0,87,916	0/0:3,0:3:9.02:0,9,97
chr10	8719696	.	C	CT	6268.21	PASS	AB=0.696;AC=35;AF=0.625;AN=56;BaseQRankSum=-3.163;DP=581;FS=1.303;HRun=12;HaplotypeScore=99.7351;InbreedingCoeff=0.3600;MQ=65.27;MQ0=0;MQRankSum=-0.927;QD=13.57;ReadPosRankSum=1.343;VQSLOD=5.0443;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:12,35:50:51.64:826,52,0	0/1:2,5:7:10.10:76,0,10	0/0:13,0:13:12.89:0,13,106	0/0:11,0:12:3.61:0,4,94	1/1:9,15:25:4.28:334,4,0	0/1:4,13:20:2.07:314,0,2	1/1:10,14:25:19.79:318,20,0	0/1:10,11:23:2.67:244,0,3	0/0:21,0:21:41.14:0,41,289	0/0:31,0:31:61.56:0,62,444	0/1:21,2:23:0.98:1,0,259	0/1:5,5:10:18.59:143,0,19	1/1:8,8:17:13.98:268,14,0	1/1:6,13:24:50.21:411,50,0	0/0:13,0:13:20.73:0,21,151	0/1:8,15:23:32.72:191,0,33	1/1:5,23:28:53.87:525,54,0	1/1:2,10:14:1.80:153,2,0	1/1:9,12:21:26.13:402,26,0	1/1:8,12:23:50.54:440,51,0	1/1:9,4:13:18.70:152,19,0	0/1:7,5:12:7.94:211,0,8	0/1:18,3:22:11.74:12,0,235	0/0:24,1:29:37.45:0,37,417	1/1:7,19:28:44.61:408,45,0	0/1:13,10:24:0.22:306,0,0	1/1:9,14:23:9.44:446,9,0	1/1:3,3:6:9.01:88,9,0
chr10	8719743	.	TGCTAGGCAAGTGCTCTACCACTGA	T	17231.82	PASS	AB=0.556;AC=21;AF=0.375;AN=56;BaseQRankSum=14.588;DP=531;FS=3.836;HRun=0;HaplotypeScore=346.0713;InbreedingCoeff=0.8560;MQ=50.60;MQ0=4;MQRankSum=-12.690;QD=100.18;ReadPosRankSum=3.647;VQSLOD=4.0132;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,132,12802	0/0:6,0:6:11.87:0,12,1149	0/0:1,0:1:3.01:0,3,289	0/0:6,0:3:9.03:0,9,771	0/0:25,0:25:66.23:0,66,6944	0/0:16,0:16:45.09:0,45,3450	0/0:31,0:31:81.28:0,81,7963	1/1:17,2:14:6.02:392,6,0	0/0:17,0:17:51.18:0,51,5174	0/0:24,0:24:63.22:0,63,6134	0/0:20,0:20:57.20:0,57,5933	1/1:2,12:14:36.12:2349,36,0	1/1:3,10:13:27.08:1590,27,0	1/1:9,8:17:24.08:1565,24,0	0/0:20,0:20:57.20:0,57,6397	0/0:20,0:20:51.18:0,51,4883	0/0:25,0:24:66:0,66,6907	0/0:15,0:15:42.14:0,42,4510	1/1:5,7:11:21.03:1025,21,0	1/1:5,12:17:33.11:1908,33,0	1/1:13,6:19:9.02:500,9,0	1/1:6,8:14:24.08:1566,24,0	0/0:21,0:21:60.21:0,60,6432	0/0:43,0:43:99:0,123,13051	0/0:19,0:19:48.15:0,48,4430	0/1:5,20:25:99:3511,0,280	1/1:7,10:16:33.11:2045,33,0	1/1:1,4:5:12.04:783,12,0
chr10	8720923	.	GACCACC	G	930.04	PASS	AC=24;AF=0.800;AN=30;BaseQRankSum=1.386;DP=235;FS=2.442;HRun=0;HaplotypeScore=58.1494;InbreedingCoeff=0.3558;MQ=80.83;MQ0=3;MQRankSum=-0.320;QD=8.30;ReadPosRankSum=0.391;VQSLOD=1.1200;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	1/1:4,1:5:2.97:20,3,0	1/1:6,0:7:3.01:42,3,0	./.	./.	0/0:5,0:5:3.01:0,3,57	0/0:5,0:5:3.01:0,3,83	./.	1/1:5,3:8:9.03:179,9,0	1/1:3,1:4:3.01:60,3,0	1/1:7,6:13:12.04:239,12,0	1/1:16,0:20:6.02:84,6,0	1/1:4,0:6:6.02:84,6,0	./.	1/1:12,0:14:2.68:42,3,0	1/1:10,2:11:6.02:119,6,0	1/1:3,2:5:2.96:20,3,0	1/1:11,1:12:3.90:62,4,0	./.	./.	0/0:9,0:11:6.02:0,6,157	1/1:4,0:6:6.02:84,6,0	./.	./.	./.
chr10	8729018	.	AG	A	9522.95	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=19.866;DP=796;FS=5.457;HRun=3;HaplotypeScore=172.2654;InbreedingCoeff=0.9996;MQ=88.13;MQ0=0;MQRankSum=-4.110;QD=34.01;ReadPosRankSum=0.284;VQSLOD=3.4966;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,129,1854	0/0:8,0:8:24.08:0,24,341	0/0:33,0:33:96.29:0,96,1348	0/0:32,0:32:93.28:0,93,1277	0/0:32,0:32:84.28:0,84,1192	0/0:42,0:42:99:0,123,1746	0/0:26,0:26:78.26:0,78,1120	1/1:2,35:37:99:1250,105,0	0/0:33,0:33:96.31:0,96,1353	0/0:38,0:38:99:0,105,1486	0/0:27,0:27:78.26:0,78,1106	1/1:0,23:23:66.21:815,66,0	1/1:1,23:24:72.23:889,72,0	1/1:1,27:28:75.13:905,75,0	0/0:37,0:37:99:0,108,1450	0/0:35,0:35:99:0,99,1387	0/0:26,0:26:72.21:0,72,991	0/0:14,0:14:39.13:0,39,561	1/1:0,19:19:57.18:703,57,0	1/1:0,20:20:60.19:737,60,0	1/1:0,30:30:81.07:943,81,0	1/1:1,30:31:80.98:949,81,0	0/0:25,0:25:72.24:0,72,1020	0/0:24,0:24:72.24:0,72,1037	0/0:40,0:40:99:0,117,1672	1/1:1,25:26:72.23:887,72,0	1/1:0,32:32:87.27:1074,87,0	1/1:0,10:10:30.09:371,30,0
chr10	8730330	.	C	CTT	1959.32	PASS	AB=0.932;AC=37;AF=0.685;AN=54;BaseQRankSum=4.157;DP=298;FS=5.518;HRun=0;HaplotypeScore=131.5378;InbreedingCoeff=-0.2070;MQ=30.35;MQ0=6;MQRankSum=-1.079;QD=7.00;ReadPosRankSum=-0.601;VQSLOD=2.6467;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:17,0:16:39.36:39,0,50	0/1:4,0:4:1.03:26,0,1	0/0:8,0:1:3.01:0,3,45	./.	0/1:20,1:21:18.41:18,0,51	1/1:9,0:9:8.23:105,8,0	0/1:21,1:21:10.20:122,0,10	0/0:2,0:2:2.94:0,3,18	1/1:9,1:9:6.18:88,6,0	0/1:22,2:22:99:342,0,275	0/1:14,0:14:10.18:10,0,35	1/1:2,5:7:11.48:46,11,0	1/1:4,2:6:11.85:69,12,0	1/1:4,1:5:9.26:56,9,0	1/1:8,0:8:0.80:86,1,0	0/1:13,0:13:50.95:118,0,51	0/1:10,0:10:18.08:62,0,18	0/1:14,0:13:99:103,0,114	1/1:4,0:4:6.96:95,7,0	1/1:11,4:15:18.45:106,18,0	1/1:3,2:3:5.55:28,6,0	1/1:5,4:9:10.34:55,10,0	1/1:15,1:16:12.80:74,13,0	0/1:17,2:19:30.45:31,0,30	0/1:11,1:12:12.81:57,0,13	0/1:2,3:5:0.11:121,0,0	0/1:4,1:5:11.57:93,0,12	1/1:5,1:5:14.73:156,15,0
chr10	8730359	.	ACGG	A	595.92	PASS	AB=0.950;AC=19;AF=0.339;AN=56;BaseQRankSum=7.740;DP=430;FS=13.506;HRun=0;HaplotypeScore=109.6300;InbreedingCoeff=-0.0069;MQ=40.26;MQ0=14;MQRankSum=-5.812;QD=3.29;ReadPosRankSum=1.997;VQSLOD=1.4552;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:22:20.27:20,0,523	0/1:4,0:4:53.35:93,0,53	0/0:39,0:15:23.51:0,24,593	0/0:36,0:10:24.54:0,25,458	0/0:21,0:21:7.16:0,7,618	0/1:16,0:16:59.07:59,0,347	0/1:24,0:22:5.80:6,0,460	0/0:6,0:5:15.05:0,15,269	0/0:13,0:13:6.49:0,6,101	0/0:26,0:24:56.11:0,56,1237	0/0:14,0:14:13.77:0,14,233	0/1:6,2:8:10.11:44,0,10	1/1:4,1:5:3.01:48,3,0	0/1:6,1:7:0:0,0,1	0/0:11,0:9:6.01:0,6,132	0/0:17,0:17:29.29:0,29,599	0/0:22,0:22:51.06:0,51,971	0/0:21,0:20:23.77:0,24,858	0/1:13,0:9:68.12:68,0,167	1/1:13,2:15:2.05:49,2,0	0/0:8,0:6:8.74:0,9,149	0/1:7,1:9:25.33:39,0,25	0/0:14,0:14:1.25:0,1,68	0/1:24,1:25:27.68:28,0,338	0/1:18,0:18:59.26:59,0,318	1/1:2,2:4:1.11:68,1,0	0/1:6,0:6:80.16:80,0,115	1/1:4,0:4:6.91:89,7,0
chr10	8730360	.	CGGCAA	C	944.30	PASS	AB=0.776;AC=18;AF=0.321;AN=56;BaseQRankSum=6.670;DP=404;FS=19.187;HRun=0;HaplotypeScore=110.2296;InbreedingCoeff=-0.1668;MQ=41.02;MQ0=12;MQRankSum=-5.614;QD=4.72;ReadPosRankSum=1.524;VQSLOD=1.0290;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:18,3:20:78.28:78,0,723	0/1:1,2:3:20.85:117,0,21	0/0:38,1:15:33.32:0,33,483	0/0:37,0:10:17.60:0,18,308	0/1:17,3:20:31.43:31,0,696	0/1:14,2:16:99:103,0,535	0/1:18,3:19:38.70:39,0,628	0/0:6,0:5:1.27:0,1,128	0/0:7,2:11:6.38:0,6,46	0/0:24,0:23:62.48:0,62,1374	0/0:14,0:14:19.87:0,20,275	0/1:4,4:8:12.54:61,0,13	0/1:2,3:5:3.54:61,0,4	0/0:6,1:7:0.47:0,0,2	0/0:10,0:8:14.92:0,15,228	0/0:14,1:15:29.53:0,30,809	0/0:21,0:21:51.17:0,51,1309	0/1:18,2:19:16.14:16,0,999	0/1:8,2:6:83.27:83,0,117	0/1:9,5:14:4.13:40,0,4	0/0:6,1:6:12.38:0,12,121	0/1:5,4:9:26.68:55,0,27	0/0:12,1:13:11.29:0,11,129	0/1:24,0:24:8.29:8,0,424	0/1:9,7:16:99:103,0,512	1/1:3,0:3:1.59:46,2,0	0/1:2,3:6:96.50:132,0,97	1/1:1,3:4:8.52:129,9,0
chr10	8730377	.	C	CAT	118.60	PASS	AB=0.938;AC=6;AF=0.107;AN=56;BaseQRankSum=4.499;DP=408;FS=6.264;HRun=0;HaplotypeScore=112.1526;InbreedingCoeff=0.1628;MQ=42.91;MQ0=22;MQRankSum=-3.690;QD=1.52;ReadPosRankSum=-3.427;VQSLOD=0.1331;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:36.93:0,37,534	0/0:5,0:5:14.31:0,14,131	0/0:42,0:15:38.07:0,38,469	0/1:45,0:11:2.08:2,0,293	0/0:22,0:22:52.79:0,53,659	0/0:19,0:18:39.95:0,40,483	0/0:32,0:29:61.77:0,62,790	0/0:4,0:4:8.23:0,8,37	0/1:7,3:12:9.86:191,0,10	0/0:20,0:19:35.99:0,36,777	0/0:8,0:8:14.87:0,15,173	0/1:6,0:7:1.44:1,0,11	0/1:4,0:4:1.46:1,0,14	1/1:7,0:7:3.54:7,4,0	0/0:8,1:7:20.52:0,21,218	0/0:14,0:14:35.46:0,35,498	0/0:25,0:25:63.17:0,63,949	0/0:21,0:20:26.97:0,27,721	0/0:3,0:3:8.24:0,8,37	0/0:11,0:11:2.58:0,3,17	0/0:5,0:5:9.24:0,9,53	0/0:6,0:7:1.18:0,1,24	0/0:12,0:11:18.09:0,18,161	0/0:20,1:21:31.79:0,32,415	0/0:13,0:13:34.83:0,35,436	0/0:3,0:3:8.72:0,9,50	0/0:5,0:5:10.83:0,11,63	0/0:4,0:4:4.99:0,5,25
chr10	8730382	.	AAC	A	332.62	PASS	AB=0.944;AC=18;AF=0.346;AN=52;BaseQRankSum=6.555;DP=399;FS=0.000;HRun=0;HaplotypeScore=102.4174;InbreedingCoeff=0.5201;MQ=43.50;MQ0=24;MQRankSum=-3.797;QD=4.06;ReadPosRankSum=-4.410;VQSLOD=1.0811;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:46.06:0,46,767	0/0:5,0:5:9.03:0,9,149	0/0:38,0:13:6.02:0,6,100	0/0:47,0:9:11.23:0,11,132	0/0:21,0:21:35.91:0,36,602	0/0:19,0:18:41.80:0,42,626	0/0:33,0:30:72.24:0,72,1197	./.	0/0:13,0:13:25.32:0,25,377	0/0:18,0:16:5.58:0,6,544	0/0:7,0:6:11.69:0,12,136	1/1:4,3:7:3.41:19,3,0	1/1:2,1:3:4.82:41,5,0	0/1:5,2:7:0:0,0,0	0/0:9,0:7:14.62:0,15,157	0/0:16,0:16:35.72:0,36,601	0/0:27,0:27:66.14:0,66,1036	0/0:21,0:21:51.12:0,51,836	1/1:2,1:3:3.01:38,3,0	1/1:9,2:11:13.62:73,14,0	./.	1/1:4,2:6:8.76:71,9,0	0/1:10,0:9:7.98:58,0,8	0/1:23,0:23:99:124,0,277	0/0:13,0:13:23.72:0,24,363	1/1:2,1:3:2.96:36,3,0	0/1:5,0:5:7.59:8,0,68	1/1:3,1:4:3:26,3,0
chr10	8730394	.	CAT	C	555.96	PASS	AB=0.959;AC=19;AF=0.365;AN=52;BaseQRankSum=6.635;DP=387;FS=0.000;HRun=0;HaplotypeScore=89.4488;InbreedingCoeff=0.4083;MQ=43.98;MQ0=24;MQRankSum=-2.156;QD=4.03;ReadPosRankSum=-5.198;VQSLOD=0.2898;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:54.15:0,54,960	0/0:3,0:3:9.03:0,9,165	0/0:35,0:6:11.95:0,12,153	0/1:40,0:6:4.03:4,0,155	0/0:16,0:16:34.36:0,34,722	0/0:20,0:19:48.07:0,48,748	0/0:35,0:32:87.18:0,87,1538	./.	0/0:15,0:15:31.32:0,31,528	0/1:19,1:18:91.06:91,0,563	0/0:6,0:5:6.91:0,7,124	1/1:6,0:6:0.88:3,1,0	1/1:3,0:3:5.68:41,6,0	0/0:7,0:7:5.29:0,5,12	0/1:13,0:11:57.33:57,0,114	0/0:18,0:18:41.33:0,41,770	0/0:32,0:32:80.93:0,81,1321	0/0:22,0:22:60.07:0,60,1047	1/1:1,0:1:2.98:21,3,0	0/1:8,0:8:0.11:0,0,2	./.	1/1:5,0:5:3.90:20,4,0	1/1:6,2:7:8.33:145,8,0	0/1:22,4:26:99:285,0,268	0/0:11,0:11:22.29:0,22,355	1/1:2,0:2:5.04:32,5,0	0/0:5,0:5:5.53:0,6,50	1/1:2,0:2:2.37:8,2,0
chr10	8730395	.	ATGG	A	56.92	PASS	AB=0.917;AC=6;AF=0.115;AN=52;BaseQRankSum=3.338;DP=373;FS=1.865;HRun=0;HaplotypeScore=90.8050;InbreedingCoeff=0.4731;MQ=44.45;MQ0=24;MQRankSum=-2.802;QD=1.07;ReadPosRankSum=0.564;VQSLOD=1.3325;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:54.18:0,54,1276	0/0:3,0:3:9.03:0,9,205	0/0:36,0:6:12.04:0,12,181	0/1:41,0:6:1.12:1,0,195	0/0:16,0:16:35.98:0,36,880	0/0:20,0:19:54.12:0,54,1180	0/0:34,0:32:93.32:0,93,2187	./.	0/0:15,0:15:31.82:0,32,701	0/0:18,0:16:47.37:0,47,918	0/0:5,0:5:12.04:0,12,248	0/1:5,1:6:0.39:0,0,0	1/1:1,1:3:1.49:50,1,0	0/0:2,5:7:5.09:0,5,12	0/0:13,0:11:24.08:0,24,443	0/0:17,0:17:48.15:0,48,1102	0/0:31,0:31:84.24:0,84,1929	0/0:21,0:21:60.21:0,60,1440	0/0:1,0:1:1.55:0,2,4	0/0:3,3:6:4.73:0,5,11	./.	0/0:2,2:4:4.19:0,4,22	0/0:8,0:7:14.93:0,15,178	0/0:23,1:25:48.57:0,49,762	0/0:11,0:11:27.08:0,27,545	1/1:1,1:2:6.02:100,6,0	0/0:2,1:4:0.21:0,0,15	0/0:1,1:2:0.47:0,0,1
chr10	8730414	.	ATGG	A	81.74	PASS	AB=0.767;AC=9;AF=0.180;AN=50;BaseQRankSum=4.228;DP=362;FS=6.121;HRun=0;HaplotypeScore=71.6209;InbreedingCoeff=0.3973;MQ=48.26;MQ0=41;MQRankSum=-2.633;QD=1.39;ReadPosRankSum=-2.957;VQSLOD=-0.0853;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:66.23:0,66,1606	0/0:4,0:4:12.04:0,12,253	0/0:43,0:3:6.02:0,6,85	0/1:45,0:5:4.86:5,0,142	0/0:14,0:14:33.11:0,33,773	0/0:16,0:16:48.16:0,48,1122	0/0:32,0:32:90.31:0,90,2169	0/1:3,0:2:1.70:6,0,2	0/0:14,0:14:36.12:0,36,889	0/0:14,0:12:33.11:0,33,713	0/0:4,0:3:8.96:0,9,166	0/1:1,1:2:0:1,0,0	1/1:0,1:1:3.01:51,3,0	0/1:0,1:1:0:0,0,0	0/0:10,0:8:7.21:0,7,301	0/0:20,0:19:54.18:0,54,1257	0/0:32,0:32:93.31:0,93,2220	0/0:27,0:26:78.22:0,78,1805	./.	0/0:0,2:2:1.25:0,1,3	0/0:3,0:2:2.88:0,3,15	./.	0/0:7,0:7:21.07:0,21,497	0/0:26,0:27:64.32:0,64,1326	0/0:9,0:9:18.05:0,18,379	0/1:2,2:4:68.63:78,0,69	1/1:0,2:2:3.01:51,3,0	./.
chr10	8730434	.	CGGCCA	C	214.28	PASS	AB=0.784;AC=6;AF=0.136;AN=44;BaseQRankSum=1.208;DP=377;FS=10.759;HRun=0;HaplotypeScore=97.4074;InbreedingCoeff=0.4940;MQ=48.21;MQ0=45;MQRankSum=-1.697;QD=5.36;ReadPosRankSum=-0.902;VQSLOD=1.2823;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:81.23:0,81,2366	0/0:4,0:4:12.04:0,12,354	0/0:49,0:3:9:0,9,143	0/0:36,0:5:10.24:0,10,234	0/0:14,0:13:35.73:0,36,1123	0/0:16,0:16:45.11:0,45,1211	0/0:34,0:34:87.27:0,87,2663	1/1:0,5:2:6.02:138,6,0	0/0:13,0:13:39.09:0,39,1016	0/0:13,0:12:33.07:0,33,671	0/0:6,0:5:15.05:0,15,357	0/0:0,1:1:0:0,0,0	./.	./.	0/0:9,0:7:18.06:0,18,435	0/0:21,0:19:54.16:0,54,1554	0/0:38,0:38:99:0,107,3027	0/0:30,0:29:75.25:0,75,2231	1/1:0,2:2:3.01:69,3,0	./.	0/0:0,1:1:0:0,0,0	./.	0/0:11,0:11:33.03:0,33,724	0/1:29,0:30:1.31:1,0,1215	0/0:10,0:10:23.87:0,24,737	0/1:1,2:3:65.87:109,0,66	./.	./.
chr10	8730462	.	AAC	A	282.46	PASS	AB=0.650;AC=10;AF=0.227;AN=44;BaseQRankSum=3.651;DP=413;FS=20.152;HRun=0;HaplotypeScore=99.5126;InbreedingCoeff=0.7191;MQ=47.35;MQ0=37;MQRankSum=-5.635;QD=12.28;ReadPosRankSum=-2.384;VQSLOD=1.2430;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:36:87.28:0,87,1408	0/0:4,0:4:9.03:0,9,150	./.	0/0:34,1:5:6.49:0,6,100	0/0:12,0:11:24.07:0,24,391	0/0:16,0:16:36.12:0,36,602	0/0:35,0:34:75.23:0,75,1191	1/1:1,8:7:21.07:267,21,0	0/0:18,0:17:45.15:0,45,748	0/0:21,1:20:6.99:0,7,607	0/0:10,0:10:30.10:0,30,502	1/1:0,3:3:3.44:20,3,0	1/1:0,1:1:0.47:1,0,0	./.	0/0:13,0:10:27.09:0,27,435	0/0:22,0:22:48.14:0,48,754	0/0:35,0:34:90.29:0,90,1473	0/0:28,0:27:69.15:0,69,1063	0/1:3,1:4:0.43:49,0,0	0/1:0,2:2:0:0,0,0	./.	./.	0/0:13,0:13:33.09:0,33,525	0/0:38,0:38:70.36:0,70,1107	0/0:9,0:7:18.06:0,18,300	1/1:1,3:4:8.86:71,9,0	./.	./.
chr10	8730481	.	AAC	A	232.79	PASS	AB=0.978;AC=15;AF=0.313;AN=48;BaseQRankSum=6.643;DP=447;FS=30.527;HRun=0;HaplotypeScore=107.8547;InbreedingCoeff=0.5285;MQ=45.70;MQ0=43;MQRankSum=-5.170;QD=3.10;ReadPosRankSum=-0.854;VQSLOD=0.8516;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:40:99:0,102,1555	0/0:5,0:5:11.79:0,12,132	0/1:36,0:5:13.10:13,0,45	./.	0/0:11,1:12:14.14:0,14,393	0/0:15,0:15:27.09:0,27,438	0/0:37,0:35:90.31:0,90,1483	0/1:9,0:8:12.60:13,0,46	0/0:21,0:20:54.17:0,54,867	0/0:21,1:19:10.66:0,11,708	0/0:13,0:13:30.10:0,30,497	1/1:3,0:3:5.98:58,6,0	1/1:1,1:2:6.02:76,6,0	./.	0/1:13,1:12:16.95:17,0,278	0/0:22,0:22:48.09:0,48,688	0/0:36,3:38:20.76:0,21,1365	0/0:35,0:35:93.25:0,93,1507	1/1:2,0:2:3.01:38,3,0	1/1:2,2:4:8.90:60,9,0	0/0:2,0:2:0:0,0,0	./.	0/0:15,0:15:30.09:0,30,472	0/0:36,0:35:59.95:0,60,901	0/0:12,0:10:24.08:0,24,394	1/1:3,0:3:5.68:75,6,0	1/1:0,1:1:3.01:38,3,0	./.
chr10	8730495	.	CGGCCA	C	649.44	PASS	AB=0.863;AC=14;AF=0.259;AN=54;BaseQRankSum=7.977;DP=487;FS=46.571;HRun=0;HaplotypeScore=143.9887;InbreedingCoeff=0.5482;MQ=46.77;MQ0=34;MQRankSum=-7.033;QD=17.55;ReadPosRankSum=-2.536;VQSLOD=1.3358;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:38:99:0,109,3404	0/0:7,0:7:18.06:0,18,550	0/0:38,1:13:14.40:0,14,479	0/0:50,1:9:17.92:0,18,292	0/0:14,0:14:29.89:0,30,903	0/0:16,0:16:42.06:0,42,1070	0/0:39,0:38:99:0,105,3256	1/1:0,6:5:15.05:346,15,0	0/0:22,0:21:57.19:0,57,1740	0/0:27,0:25:72.22:0,72,2040	0/0:14,0:14:36.08:0,36,991	1/1:1,3:4:8.54:43,9,0	1/1:1,1:2:1.43:12,1,0	0/1:3,0:3:25.75:26,0,40	0/0:13,0:11:23.06:0,23,731	0/0:21,0:21:48.16:0,48,1494	0/0:45,0:44:99:0,110,3769	0/0:34,0:34:99:0,102,3087	1/1:0,2:2:6.02:110,6,0	0/1:4,2:6:2.38:64,0,2	0/0:0,2:2:0.47:0,0,1	0/1:2,0:2:12.18:12,0,44	0/0:14,0:14:38.86:0,39,884	0/0:35,0:34:65.72:0,66,1948	0/0:17,0:16:35.61:0,36,964	0/1:4,3:7:99:126,0,105	1/1:5,0:5:13.47:73,13,0	./.
chr10	8730508	.	CACACACACGGCAA	C	1163.07	PASS	AB=1.000;AC=19;AF=0.365;AN=52;BaseQRankSum=10.225;DP=531;FS=55.632;HRun=0;HaplotypeScore=238.6075;InbreedingCoeff=0.8166;MQ=49.91;MQ0=22;MQRankSum=-7.031;QD=14.36;ReadPosRankSum=-0.168;VQSLOD=0.9670;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,120,5666	0/0:9,0:9:24.55:0,25,1237	0/1:42,0:18:7.33:7,0,885	0/0:55,0:17:35.68:0,36,1351	0/0:21,0:21:52.44:0,52,1719	0/0:16,0:16:45.11:0,45,1858	0/0:39,0:38:91.15:0,91,3946	1/1:1,0:1:2.97:20,3,0	0/0:24,0:23:56.67:0,57,2551	0/0:35,0:34:93.30:0,93,4220	0/0:16,0:16:42.06:0,42,1764	1/1:2,2:4:11.81:156,12,0	1/1:2,1:3:6.02:113,6,0	1/1:3,0:3:9:90,9,0	0/0:13,0:12:29.25:0,29,1353	0/0:20,0:20:45.08:0,45,2112	0/0:47,0:46:99:0,129,6145	0/0:37,0:37:46.88:0,47,4687	1/1:0,1:1:3.01:87,3,0	1/1:6,2:8:19.03:268,19,0	./.	1/1:4,0:4:5.69:50,6,0	0/0:18,0:18:44.26:0,44,1812	0/0:35,0:34:59.81:0,60,2747	0/0:18,0:18:51.11:0,51,2159	1/1:5,2:7:21.07:386,21,0	1/1:7,0:7:20.03:174,20,0	./.
chr10	8730516	.	CGGCAA	C	1476.82	PASS	AC=18;AF=0.346;AN=52;BaseQRankSum=9.942;DP=528;FS=55.205;HRun=0;HaplotypeScore=167.8338;InbreedingCoeff=0.8848;MQ=55.40;MQ0=7;MQRankSum=-7.687;QD=38.86;ReadPosRankSum=3.370;VQSLOD=1.7215;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,1:44:99:0,123,3456	0/0:10,0:10:27.56:0,28,804	0/0:45,0:25:12.99:0,13,1231	0/0:51,2:23:56.64:0,57,1341	0/0:21,0:21:56.90:0,57,1231	0/0:17,0:17:51.13:0,51,1393	0/0:40,0:39:99:0,101,2788	1/1:0,0:1:3.01:44,3,0	0/0:22,0:22:57.69:0,58,1521	0/0:34,0:33:99:0,99,2913	0/0:16,0:16:45.02:0,45,1182	1/1:2,2:4:12.04:190,12,0	1/1:2,1:3:6.02:92,6,0	1/1:0,3:3:9.03:138,9,0	0/0:16,0:15:42.03:0,42,1164	0/0:20,0:20:51.10:0,51,1362	0/0:48,0:48:99:0,141,4002	0/0:36,0:36:53.55:0,54,2886	1/1:1,0:1:3.01:60,3,0	1/1:2,5:8:21.06:317,21,0	./.	1/1:0,2:4:6.02:91,6,0	0/0:16,0:16:45.58:0,46,1278	0/0:31,0:33:62.95:0,63,1778	0/0:19,0:19:54.12:0,54,1467	1/1:2,5:7:21.07:398,21,0	1/1:1,5:7:21.07:333,21,0	./.
chr10	8730526	.	A	ACTCTCT	2493.19	PASS	AC=18;AF=0.346;AN=52;BaseQRankSum=9.745;DP=511;FS=42.243;HRun=0;HaplotypeScore=171.9756;InbreedingCoeff=0.8889;MQ=61.10;MQ0=5;MQRankSum=-8.164;QD=63.93;ReadPosRankSum=4.019;VQSLOD=2.1496;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,123,2919	0/0:12,0:12:33.11:0,33,788	0/0:38,0:23:62.84:0,63,1244	0/0:53,0:35:50.98:0,51,1644	0/0:21,0:21:51.65:0,52,1211	0/0:17,0:17:45.15:0,45,1075	0/0:32,0:32:87.17:0,87,1938	1/1:1,0:1:3.01:66,3,0	0/0:20,0:20:48.16:0,48,1152	0/0:34,0:34:96.30:0,96,2202	0/0:17,0:17:42.14:0,42,998	1/1:2,2:4:12.04:323,12,0	1/1:3,1:4:6.02:158,6,0	1/1:0,3:3:9.03:233,9,0	0/0:18,0:17:45.14:0,45,1054	0/0:16,0:16:42.14:0,42,1034	0/0:47,0:47:99:0,132,3171	0/0:39,0:39:99:0,108,2561	1/1:1,0:1:3.01:93,3,0	1/1:4,4:8:21.07:523,21,0	./.	1/1:2,2:4:6.02:155,6,0	0/0:17,0:17:48.14:0,48,1073	0/0:26,0:26:51.13:0,51,1167	0/0:19,0:19:51.16:0,51,1153	1/1:2,5:7:21.07:623,21,0	1/1:2,5:7:21.07:507,21,0	./.
chr10	8731270	.	TC	T	6912.16	PASS	AB=0.556;AC=21;AF=0.375;AN=56;BaseQRankSum=15.888;DP=606;FS=0.316;HRun=5;HaplotypeScore=75.1114;InbreedingCoeff=0.9235;MQ=89.03;MQ0=0;MQRankSum=-0.945;QD=30.18;ReadPosRankSum=-0.209;VQSLOD=5.0701;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:78.24:0,78,1043	0/0:9,0:9:27.09:0,27,369	0/0:34,0:34:96.24:0,96,1244	0/0:10,0:10:26.97:0,27,316	0/0:21,0:21:60.19:0,60,803	0/0:26,0:26:72.24:0,72,984	0/0:26,0:26:78.25:0,78,1049	1/1:3,28:31:84.24:951,84,0	0/0:17,0:17:51.17:0,51,697	0/0:22,0:21:63.17:0,63,839	0/0:27,0:27:78.17:0,78,1038	1/1:0,17:17:48.14:544,48,0	1/1:3,19:23:57.16:646,57,0	1/1:1,20:21:54.15:612,54,0	0/0:25,0:25:75.24:0,75,1012	0/0:20,0:20:60.18:0,60,784	0/0:26,0:26:75.25:0,75,1025	0/0:27,0:27:75.25:0,75,1025	1/1:2,16:18:48.13:542,48,0	1/1:0,28:28:81.23:918,81,0	1/1:0,20:20:60.17:681,60,0	1/1:3,16:19:38.71:426,39,0	0/0:22,0:22:63.20:0,63,844	0/0:19,0:19:57.16:0,57,759	0/0:15,0:15:45.08:0,45,592	1/1:1,16:17:48.12:533,48,0	1/1:1,24:25:72.21:816,72,0	0/1:2,8:10:50.80:242,0,51
chr10	8731677	.	GGTGTGTGTGT	G	1359.48	PASS	AB=0.919;AC=28;AF=0.583;AN=48;BaseQRankSum=-0.301;DP=755;FS=0.000;HRun=0;HaplotypeScore=234.0033;InbreedingCoeff=0.1334;MQ=56.21;MQ0=20;MQRankSum=-2.001;QD=2.72;ReadPosRankSum=-1.379;VQSLOD=2.3743;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:27,3:27:0.51:1,0,5	1/1:10,5:15:5.94:118,6,0	./.	0/0:34,0:24:0:0,0,0	./.	0/1:16,8:22:25.29:117,0,25	0/1:25,3:28:4.34:50,0,4	0/0:50,0:46:11.92:0,12,88	1/1:11,0:37:9.03:209,9,0	1/1:34,8:38:20.92:411,21,0	1/1:16,5:20:2.76:17,3,0	1/1:29,0:29:0.94:1,1,0	0/0:15,0:14:5.23:0,5,52	1/1:28,0:27:3.01:70,3,0	1/1:22,13:33:2.68:11,3,0	1/1:16,13:29:5.68:126,6,0	0/1:17,4:20:71.35:80,0,71	0/1:19,0:17:43.04:122,0,43	0/1:22,0:20:34.36:61,0,34	0/0:31,0:30:0:0,0,0	./.	0/1:16,0:15:0:0,0,0	0/0:13,0:14:0:0,0,0	0/0:13,10:21:0.47:0,0,1	1/1:20,12:31:2.97:70,3,0	1/1:38,0:35:4.46:15,4,0	0/1:29,0:29:0:0,0,0	./.
chr10	8731708	.	GTGTGTGTGTGTGTGTGTGTATGTA	G	2771.57	PASS	AB=0.873;AC=15;AF=0.268;AN=56;BaseQRankSum=9.052;DP=644;FS=23.116;HRun=0;HaplotypeScore=297.4523;InbreedingCoeff=0.2757;MQ=43.41;MQ0=41;MQRankSum=-1.695;QD=12.16;ReadPosRankSum=0.893;VQSLOD=1.1464;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:33:47.62:0,48,1111	0/0:15,0:14:12.04:0,12,413	0/0:18,0:6:15.03:0,15,238	0/0:22,0:7:17.95:0,18,261	0/0:17,0:16:18.04:0,18,681	0/0:23,0:20:24.08:0,24,960	0/0:25,0:25:36.90:0,37,953	1/1:11,29:33:36.30:1001,36,0	0/1:35,0:34:99:125,0,270	0/0:42,0:37:99:0,103,2457	0/0:21,0:20:26.56:0,27,545	1/1:5,19:23:0.72:2,1,0	0/1:13,0:12:97.29:110,0,97	0/1:3,12:15:22.96:189,0,23	0/0:39,0:35:34.05:0,34,1036	0/0:27,0:27:31.39:0,31,750	0/0:17,0:16:15.03:0,15,359	0/0:18,0:16:36.79:0,37,571	1/1:6,15:19:40.06:785,40,0	0/0:6,19:24:8.26:0,8,45	0/1:22,0:16:29.20:132,0,29	1/1:13,1:12:5.97:74,6,0	0/0:12,0:10:15.51:0,16,363	0/0:30,0:27:27.55:0,28,903	0/0:27,0:25:34.91:0,35,956	0/1:5,20:22:99:499,0,133	0/1:14,0:14:8.80:9,0,37	0/1:5,0:3:11:11,0,16
chr10	8731805	.	G	GTA	1194.61	PASS	AB=0.822;AC=13;AF=0.241;AN=54;BaseQRankSum=1.798;DP=932;FS=21.301;HRun=0;HaplotypeScore=160.2649;InbreedingCoeff=0.4111;MQ=44.79;MQ0=107;MQRankSum=-5.390;QD=6.95;ReadPosRankSum=-3.002;VQSLOD=1.5147;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:38:99:0,104,1406	0/0:17,0:14:39.12:0,39,566	0/0:52,0:17:42.11:0,42,607	0/0:43,0:17:45.15:0,45,650	0/0:36,0:35:96.31:0,96,1459	0/0:27,0:26:60:0,60,829	0/0:35,0:32:87.24:0,87,1293	0/1:22,4:9:63.73:301,0,64	0/0:117,0:113:99:0,282,4048	0/0:70,0:66:99:0,190,2715	0/0:24,0:24:66.21:0,66,968	0/1:17,1:8:11.97:47,0,12	./.	1/1:13,4:8:9.03:170,9,0	0/0:73,0:68:99:0,156,2107	0/0:41,0:36:93.14:0,93,1335	0/0:23,0:22:66.22:0,66,1008	0/0:14,0:13:30.10:0,30,455	1/1:17,1:7:18:213,18,0	0/0:10,2:10:0:0,0,0	0/1:18,2:13:67.83:68,0,80	0/1:4,31:33:36.82:107,0,37	0/0:39,0:36:99:0,108,1618	0/0:47,0:44:99:0,120,1632	0/0:35,0:33:99:0,102,1496	0/1:15,3:12:22.33:276,0,22	1/1:10,8:10:6.02:116,6,0	1/1:0,2:2:3.01:58,3,0
chr10	8734114	.	TCAAACAAA	T	13532.86	PASS	AB=0.560;AC=33;AF=0.589;AN=56;BaseQRankSum=-10.218;DP=626;FS=0.820;HRun=0;HaplotypeScore=183.2324;InbreedingCoeff=0.9082;MQ=62.00;MQ0=9;MQRankSum=-12.062;QD=38.12;ReadPosRankSum=1.360;VQSLOD=4.3912;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:24:44.85:0,45,404	0/0:4,0:14:26.97:0,27,228	0/0:32,0:23:33.11:0,33,1140	0/0:26,0:22:30.10:0,30,786	0/0:9,0:25:47.18:0,47,393	0/0:8,0:31:53.92:0,54,442	0/0:8,0:19:23.99:0,24,214	1/1:15,15:30:45.15:967,45,0	0/0:7,0:25:44.96:0,45,386	1/1:7,18:25:57.20:1407,57,0	1/1:2,12:14:33.11:779,33,0	1/1:5,16:21:30.10:769,30,0	1/1:7,16:23:39.13:1002,39,0	1/1:8,18:26:42.14:1079,42,0	1/1:7,30:37:72.25:1848,72,0	0/0:4,0:33:71.92:0,72,593	0/1:3,0:14:28.90:29,0,192	0/0:6,0:18:36:0,36,369	1/1:13,1:14:8.99:159,9,0	1/1:16,17:32:42.14:1011,42,0	1/1:7,8:15:15.05:364,15,0	1/1:7,16:23:36.12:886,36,0	1/1:3,10:13:24.08:597,24,0	1/1:8,8:15:14.71:383,15,0	0/0:8,0:23:29.97:0,30,250	1/1:7,12:18:33.09:712,33,0	1/1:3,23:26:48.16:1233,48,0	1/1:1,5:6:12.04:308,12,0
chr10	8734290	.	C	CACAT	20799.43	PASS	AB=0.627;AC=30;AF=0.536;AN=56;BaseQRankSum=-6.855;DP=892;FS=5.315;HRun=0;HaplotypeScore=173.2947;InbreedingCoeff=0.8567;MQ=62.06;MQ0=2;MQRankSum=0.353;QD=39.62;ReadPosRankSum=2.989;VQSLOD=5.1003;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:70.97:0,71,1075	0/0:10,0:10:27.09:0,27,446	0/0:44,0:37:53.90:0,54,798	0/0:42,0:26:36.01:0,36,480	0/0:30,0:30:75.24:0,75,1222	0/0:29,0:29:51.17:0,51,848	0/0:29,0:29:60.19:0,60,969	1/1:23,10:38:48.11:951,48,0	0/0:28,0:28:63.22:0,63,1045	1/1:10,20:32:69.17:1501,69,0	1/1:5,23:29:51.18:1257,51,0	0/1:12,9:23:19.85:630,0,20	1/1:8,16:25:48.16:1166,48,0	1/1:9,24:33:51.18:1246,51,0	1/1:7,36:45:84.29:2069,84,0	0/0:38,0:38:99:0,105,1696	0/0:23,0:23:54.14:0,54,839	0/0:23,0:22:39.13:0,39,637	1/1:11,14:25:47.74:1043,48,0	1/1:9,28:38:60.21:1479,60,0	1/1:13,22:39:60.21:1476,60,0	1/1:9,20:31:48.16:1183,48,0	1/1:14,18:36:51.65:1251,52,0	1/1:7,22:32:51.15:1257,51,0	0/0:32,0:31:72.25:0,72,1194	1/1:8,32:42:99:2307,99,0	0/1:10,24:36:33.64:1392,0,34	1/1:5,9:15:24.08:591,24,0
chr10	8735155	.	ATGTGTGTGTC	A	2681.64	PASS	AB=1.000;AC=33;AF=0.635;AN=52;BaseQRankSum=-7.050;DP=485;FS=37.260;HRun=0;HaplotypeScore=176.5299;InbreedingCoeff=-0.2903;MQ=59.67;MQ0=13;MQRankSum=2.534;QD=6.77;ReadPosRankSum=7.973;VQSLOD=1.0007;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:24:14.72:206,15,0	./.	0/0:33,0:18:8.98:0,9,98	0/0:27,0:18:20.11:0,20,150	./.	1/1:12,0:12:6.01:101,6,0	1/1:15,0:15:38.43:292,38,0	1/1:23,0:20:24.45:206,24,0	1/1:5,8:12:5.48:151,5,0	0/1:16,0:16:99:181,0,230	0/1:19,0:19:92.52:106,0,93	0/1:15,0:14:8.96:9,0,265	0/1:13,0:12:23.86:24,0,447	0/1:25,0:25:99:134,0,626	1/1:14,0:14:8.99:75,9,0	1/1:15,0:15:8.96:96,9,0	1/1:14,0:12:11.35:231,11,0	0/1:11,0:11:24.64:113,0,25	0/1:10,0:10:20.49:47,0,20	0/1:14,0:13:63.20:63,0,384	0/1:28,0:25:57.21:166,0,57	0/1:17,0:15:99:100,0,122	1/1:13,0:13:5.99:49,6,0	0/1:20,0:19:91.64:92,0,406	0/1:17,0:17:8.68:60,0,9	0/1:25,0:25:99:145,0,372	0/1:16,0:16:67.80:68,0,436	0/1:7,0:6:99:128,0,102
chr10	8735167	.	GTGTGTGTC	G	3855.22	PASS	AB=1.000;AC=36;AF=0.667;AN=54;BaseQRankSum=-7.663;DP=492;FS=42.680;HRun=0;HaplotypeScore=156.2930;InbreedingCoeff=-0.2329;MQ=54.30;MQ0=21;MQRankSum=0.372;QD=9.16;ReadPosRankSum=2.466;VQSLOD=1.4034;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:26:23.26:303,23,0	1/1:3,0:3:1.82:5,2,0	0/0:20,0:7:8.98:0,9,98	0/0:23,0:14:20.11:0,20,150	./.	1/1:11,0:11:9.02:126,9,0	1/1:21,1:22:53.80:544,54,0	1/1:23,0:18:28.03:215,28,0	1/1:11,0:10:5.70:105,6,0	0/1:23,0:23:99:209,0,149	0/1:18,0:18:78.36:100,0,78	0/1:14,0:13:31.08:31,0,229	0/1:13,0:12:20.40:20,0,349	0/1:21,0:21:99:134,0,443	1/1:17,0:17:8.99:75,9,0	1/1:1,15:16:3.78:204,4,0	1/1:13,3:14:32.92:511,33,0	0/1:10,0:10:13.97:178,0,14	0/1:9,0:8:7.90:47,0,8	0/1:19,0:17:99:114,0,238	0/1:32,0:28:30.82:193,0,31	0/1:16,0:14:65.36:125,0,65	1/1:11,0:11:5.99:49,6,0	0/1:20,0:19:99:118,0,272	1/1:4,16:20:8.74:105,9,0	0/1:28,0:26:99:166,0,184	0/1:12,0:11:67.80:68,0,341	0/1:8,0:7:81.76:109,0,82
chr10	8735173	.	GTC	G	3784.84	PASS	AB=0.992;AC=37;AF=0.685;AN=54;BaseQRankSum=-4.777;DP=472;FS=10.830;HRun=0;HaplotypeScore=113.0061;InbreedingCoeff=-0.0779;MQ=50.76;MQ0=25;MQRankSum=-0.445;QD=9.25;ReadPosRankSum=1.896;VQSLOD=2.9960;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:25:0.42:225,0,0	0/0:3,0:3:1.55:0,2,4	0/0:17,0:4:8.98:0,9,98	0/0:17,0:9:20.11:0,20,150	./.	0/1:9,0:9:6.61:34,0,7	0/1:22,0:22:23.46:271,0,23	0/1:25,0:18:1.40:227,0,1	1/1:11,0:10:5.83:45,6,0	1/1:22,0:21:34.29:427,34,0	0/1:18,0:18:6.29:100,0,6	0/1:13,0:12:19.89:80,0,20	0/1:13,0:12:22.45:102,0,22	0/1:23,0:23:32.75:201,0,33	1/1:15,0:15:8.99:75,9,0	0/1:16,0:16:26.36:26,0,42	1/1:17,0:15:14.39:176,14,0	1/1:9,1:10:4.65:118,5,0	0/1:9,0:9:10.66:73,0,11	1/1:20,1:19:2.26:229,2,0	1/1:31,1:28:30.01:355,30,0	1/1:13,1:12:14.02:184,14,0	1/1:6,2:8:5.99:49,6,0	1/1:21,0:19:23.87:191,24,0	0/1:19,0:19:24.73:35,0,25	1/1:22,2:22:36.38:370,36,0	0/1:11,0:10:30.52:70,0,31	1/1:7,1:7:0.61:122,1,0
chr10	8735197	.	G	GTC	933.64	PASS	AB=0.810;AC=13;AF=0.232;AN=56;BaseQRankSum=-5.106;DP=503;FS=17.578;HRun=0;HaplotypeScore=126.5954;InbreedingCoeff=0.1629;MQ=51.83;MQ0=23;MQRankSum=3.430;QD=5.05;ReadPosRankSum=2.710;VQSLOD=2.1544;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:10,17:26:40.02:40,0,94	1/1:6,0:6:11.99:103,12,0	0/0:14,0:4:5.65:0,6,60	0/0:21,0:9:18.23:0,18,172	1/1:28,0:28:1.77:102,2,0	0/1:5,7:12:42.20:46,0,42	0/1:16,5:21:80.71:363,0,81	0/0:28,0:21:50.19:0,50,363	0/0:11,0:10:11.67:0,12,90	0/0:22,0:21:53.68:0,54,418	0/0:21,0:21:2.99:0,3,43	0/0:12,0:12:22.18:0,22,222	0/0:12,0:11:23.97:0,24,279	0/0:23,0:23:53.88:0,54,555	0/0:18,0:18:0:0,0,0	1/1:16,0:16:3.49:101,3,0	0/1:13,7:18:99:109,0,106	0/1:12,1:12:88.19:144,0,88	0/0:13,0:12:27.33:0,27,207	0/0:21,0:19:44.68:0,45,397	0/0:31,0:28:54.39:0,54,456	0/0:13,0:12:23.98:0,24,218	0/0:8,0:8:11.90:0,12,89	0/1:23,0:21:8.73:9,0,132	0/1:18,1:19:30.93:69,0,31	0/0:29,0:27:68.45:0,68,560	0/0:13,0:12:27.01:0,27,299	0/0:8,0:7:15.86:0,16,166
chr10	8735210	.	T	TGTGC	2608.48	PASS	AB=0.941;AC=24;AF=0.429;AN=56;BaseQRankSum=-2.500;DP=500;FS=8.428;HRun=0;HaplotypeScore=123.3624;InbreedingCoeff=0.4071;MQ=57.89;MQ0=17;MQRankSum=-0.364;QD=9.28;ReadPosRankSum=1.345;VQSLOD=2.4313;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:17.52:0,18,138	0/0:7,0:7:14.94:0,15,118	0/0:25,0:13:35.83:0,36,341	0/0:30,0:16:41.24:0,41,440	0/0:26,0:26:26.94:0,27,217	0/0:10,0:10:7.56:0,8,42	0/0:18,0:18:38.97:0,39,253	1/1:33,0:30:56.51:492,57,0	0/0:11,0:10:10.52:0,11,68	1/1:20,0:20:37.69:352,38,0	0/0:2,14:18:2.73:0,3,12	0/1:11,0:11:42.21:119,0,42	0/1:11,0:11:26.19:26,0,68	0/1:19,0:19:89.48:110,0,89	0/1:2,15:18:0:0,0,0	0/0:15,0:15:20:0,20,197	0/0:22,0:20:26.42:0,26,219	0/0:12,0:11:3.72:0,4,130	1/1:16,0:15:37.54:268,38,0	0/1:20,0:19:14.99:248,0,15	1/1:23,0:21:12.39:207,12,0	1/1:10,0:10:3.41:126,3,0	1/1:9,0:10:15.75:107,16,0	1/1:7,1:20:12.04:186,12,0	0/1:16,0:16:6.33:6,0,52	1/1:30,0:28:39.36:387,39,0	0/1:14,0:13:45.30:86,0,45	0/1:7,0:7:3.50:78,0,3
chr10	8735524	.	C	CAGAA	16834.81	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=3.671;DP=523;FS=2.541;HRun=0;HaplotypeScore=89.6459;InbreedingCoeff=0.9895;MQ=88.58;MQ0=0;MQRankSum=-5.881;QD=58.25;ReadPosRankSum=2.107;VQSLOD=6.5852;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:96.32:0,96,1694	0/0:6,0:6:18.06:0,18,327	0/0:25,0:25:63.21:0,63,1084	0/0:22,0:22:52.87:0,53,885	0/0:19,0:19:45.15:0,45,811	0/0:17,0:17:45.15:0,45,818	0/0:22,0:22:57.16:0,57,965	1/1:9,12:21:45.12:1007,45,0	0/0:19,0:19:48.16:0,48,862	1/1:1,28:31:87.27:2116,87,0	1/1:2,9:11:24.08:628,24,0	1/1:2,17:23:45.15:1176,45,0	1/1:3,18:22:54.19:1400,54,0	1/1:4,13:17:42.10:1023,42,0	1/1:0,18:19:48.16:1257,48,0	0/0:16,0:16:45.15:0,45,786	0/0:20,0:19:57.20:0,57,1025	0/0:13,0:13:33.11:0,33,600	1/1:6,13:20:48.15:1103,48,0	1/1:5,9:14:30.10:730,30,0	1/1:1,13:14:33.11:864,33,0	1/1:2,12:14:36.04:824,36,0	1/1:2,13:16:36.12:924,36,0	1/1:2,6:9:15.05:393,15,0	0/0:19,0:19:54.19:0,54,968	1/1:5,18:25:14.64:1579,15,0	1/1:7,20:28:60.16:1498,60,0	1/1:0,4:4:12.04:314,12,0
chr10	8736583	.	C	CACTATCTATCTATCT	2768.34	PASS	AB=0.628;AC=19;AF=0.339;AN=56;BaseQRankSum=5.087;DP=627;FS=8.294;HRun=0;HaplotypeScore=233.1132;InbreedingCoeff=0.8656;MQ=70.30;MQ0=9;MQRankSum=-6.235;QD=12.76;ReadPosRankSum=-1.780;VQSLOD=1.2904;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:5,0:32:21.24:341,21,0	1/1:2,0:11:6.02:98,6,0	0/0:43,0:24:65.16:0,65,961	0/0:26,0:13:32.51:0,33,411	1/1:0,26:37:3.35:225,3,0	1/1:0,0:19:12.04:212,12,0	1/1:12,0:15:36.12:727,36,0	0/0:30,0:30:81.26:0,81,1196	0/0:14,0:24:52.06:0,52,1116	0/1:11,0:27:12.03:12,0,755	0/0:19,0:31:60.20:0,60,895	0/0:19,0:19:54.18:0,54,1528	0/0:18,0:18:51.17:0,51,1422	0/0:12,0:12:36.12:0,36,1072	0/0:13,0:30:72.67:0,73,1106	1/1:0,0:24:21.07:503,21,0	1/1:7,0:8:15.04:263,15,0	1/1:2,0:21:12.04:330,12,0	0/0:11,0:17:34.76:0,35,549	0/0:28,0:28:75.26:0,75,2062	0/0:14,0:14:42.13:0,42,1026	0/0:25,0:25:72.25:0,72,1631	0/0:20,0:20:53.39:0,53,1323	0/0:17,0:18:48.08:0,48,1301	1/1:3,0:23:15.05:261,15,0	0/0:7,0:15:45.15:0,45,1058	0/0:17,0:23:66.21:0,66,1332	0/0:7,0:16:36.12:0,36,884
chr10	8736887	.	AGAGG	A	2926.42	PASS	AB=1.000;AC=34;AF=0.607;AN=56;BaseQRankSum=1.528;DP=400;FS=6.839;HRun=0;HaplotypeScore=77.2818;InbreedingCoeff=0.5486;MQ=74.94;MQ0=9;MQRankSum=-1.786;QD=11.21;ReadPosRankSum=-1.772;VQSLOD=1.5870;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:19:35.32:0,35,397	0/0:10,0:9:3.56:0,4,171	0/1:27,0:12:18.55:19,0,98	0/1:32,0:21:24.35:24,0,166	0/0:13,0:13:0.31:0,0,216	0/0:12,0:12:7.82:0,8,231	0/0:17,0:17:9.31:0,9,316	1/1:17,0:17:45.03:417,45,0	0/0:15,0:15:18.28:0,18,521	1/1:16,0:16:38.79:309,39,0	1/1:11,0:11:23.97:200,24,0	1/1:11,0:11:23.97:210,24,0	1/1:12,0:12:29.94:245,30,0	0/1:12,0:12:52.64:89,0,53	1/1:0,13:13:2.98:56,3,0	0/0:26,0:26:49.01:0,49,806	0/0:15,0:14:38.86:0,39,507	0/1:14,0:14:18.90:19,0,360	1/1:11,0:11:28.29:226,28,0	1/1:18,0:18:23.52:194,24,0	1/1:4,0:4:0.47:1,0,0	1/1:10,0:9:11.99:100,12,0	1/1:12,0:12:9.23:163,9,0	1/1:17,0:17:38.83:304,39,0	0/0:11,0:11:20.19:0,20,260	1/1:13,0:13:32.30:275,32,0	1/1:7,1:8:23.93:223,24,0	1/1:3,0:3:5.99:48,6,0
chr10	8736889	.	AGG	A	3097.80	PASS	AB=1.000;AC=37;AF=0.661;AN=56;BaseQRankSum=2.170;DP=396;FS=4.200;HRun=3;HaplotypeScore=64.0801;InbreedingCoeff=0.4435;MQ=73.84;MQ0=10;MQRankSum=-1.638;QD=10.79;ReadPosRankSum=-2.076;VQSLOD=-0.1224;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:18:2.20:0,2,230	0/0:10,0:9:3.55:0,4,141	0/1:27,0:12:18.55:19,0,98	0/1:30,0:20:24.33:24,0,166	0/0:12,0:12:0.31:0,0,187	0/1:14,0:14:6.72:7,0,166	0/0:16,0:16:8.97:0,9,275	1/1:16,0:16:45.03:417,45,0	0/1:16,0:16:6.96:7,0,282	1/1:0,16:16:38.85:312,39,0	1/1:10,0:10:23.97:200,24,0	1/1:11,0:11:23.91:190,24,0	1/1:12,0:12:29.94:245,30,0	1/1:12,0:12:10.38:171,10,0	1/1:13,0:13:2.70:25,3,0	0/0:26,0:26:17.95:0,18,630	0/0:15,0:14:18.39:0,18,321	0/1:15,0:15:52.29:52,0,184	1/1:9,3:12:30.80:247,31,0	1/1:11,5:16:23.72:194,24,0	1/1:4,0:4:3:25,3,0	1/1:9,0:8:11.99:100,12,0	1/1:11,0:11:26.25:204,26,0	1/1:17,0:17:38.83:303,39,0	0/0:11,0:11:20.19:0,20,233	1/1:14,0:13:35.81:298,36,0	1/1:8,0:8:23.91:192,24,0	1/1:3,0:3:5.99:48,6,0
chr10	8738517	.	C	CCAT	9736.18	PASS	AB=0.728;AC=29;AF=0.518;AN=56;BaseQRankSum=-12.106;DP=976;FS=1.112;HRun=0;HaplotypeScore=122.1060;InbreedingCoeff=0.6209;MQ=52.17;MQ0=64;MQRankSum=3.441;QD=14.91;ReadPosRankSum=1.119;VQSLOD=4.6970;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:42:99:0,111,1265	0/0:12,0:12:27.04:0,27,341	0/0:25,0:8:11.19:0,11,168	0/0:34,0:12:29.71:0,30,211	0/0:18,0:17:35.32:0,35,479	0/0:24,0:22:57.06:0,57,740	0/0:45,0:45:99:0,105,1270	1/1:29,32:47:26.58:896,27,0	1/1:2,1:3:8.88:98,9,0	1/1:13,18:24:44.71:570,45,0	1/1:5,11:15:11.96:206,12,0	1/1:3,32:36:23.59:801,24,0	1/1:7,25:32:39.05:817,39,0	1/1:7,39:46:52.88:1056,53,0	1/1:4,35:41:36.01:749,36,0	0/0:19,0:18:48.07:0,48,583	0/0:31,0:30:81.10:0,81,989	0/0:41,0:40:99:0,105,1383	0/1:27,13:27:8.43:470,0,8	0/1:10,16:23:14.85:406,0,15	0/1:65,48:106:99:275,0,256	1/1:11,19:26:8.90:189,9,0	1/1:7,9:13:6.02:126,6,0	1/1:4,48:53:58.50:1259,58,0	0/0:26,0:22:57.11:0,57,728	1/1:26,24:39:25.05:932,25,0	0/1:11,26:35:32.03:770,0,32	0/1:10,0:9:8.99:116,0,9
chr10	8740680	.	G	GCTCT	3029.72	PASS	AB=0.759;AC=50;AF=0.926;AN=54;BaseQRankSum=0.541;DP=800;FS=4.436;HRun=0;HaplotypeScore=197.9056;InbreedingCoeff=-0.0279;MQ=57.44;MQ0=22;MQRankSum=0.252;QD=4.03;ReadPosRankSum=1.190;VQSLOD=2.4829;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:50,0:50:32.90:481,33,0	1/1:10,0:9:2.99:24,3,0	./.	0/1:71,0:25:0:0,0,0	1/1:33,0:33:2.93:46,3,0	1/1:19,0:25:5.99:88,6,0	1/1:26,0:26:12.04:209,12,0	1/1:40,0:40:26.74:228,27,0	1/1:26,0:25:6:74,6,0	1/1:35,0:33:24.47:246,24,0	1/1:35,0:32:2.99:23,3,0	0/1:15,1:29:14.54:153,0,15	0/1:10,1:19:73.24:96,0,73	0/1:14,1:26:62.84:79,0,63	1/1:22,0:21:1.23:21,1,0	1/1:26,0:28:9.02:117,9,0	1/1:24,0:24:7.73:104,8,0	1/1:3,1:10:9.03:154,9,0	1/1:10,0:10:15.05:277,15,0	1/1:21,1:28:9.03:175,9,0	1/1:23,0:21:3.01:51,3,0	1/1:15,0:24:8.23:37,8,0	1/1:20,0:19:8.99:90,9,0	1/1:26,0:23:2.30:35,2,0	1/1:18,0:27:2.90:52,3,0	1/1:40,0:38:27:218,27,0	1/1:30,0:29:8.65:56,9,0	1/1:14,0:13:1.41:2,1,0
chr10	8741406	.	T	TAA	10433.38	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-17.037;DP=680;FS=8.482;HRun=5;HaplotypeScore=82.6474;InbreedingCoeff=0.9999;MQ=81.18;MQ0=2;MQRankSum=-1.853;QD=45.96;ReadPosRankSum=1.633;VQSLOD=3.4884;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,23:23:66.23:1154,66,0	1/1:1,18:19:51.13:859,51,0	0/0:20,0:20:45.13:0,45,559	0/0:18,0:18:34.85:0,35,419	1/1:3,33:36:99:1758,102,0	1/1:0,33:34:90.31:1574,90,0	1/1:3,15:18:42.14:735,42,0	0/0:24,0:24:66.21:0,66,841	0/0:19,0:19:45.14:0,45,574	0/0:28,0:28:84.27:0,84,1070	0/0:27,0:27:72.23:0,72,917	0/0:17,0:17:39.11:0,39,484	0/0:26,0:26:75.24:0,75,956	0/0:23,0:23:54.15:0,54,674	0/0:29,0:29:87.28:0,87,1109	1/1:2,26:28:78.27:1364,78,0	1/1:3,21:24:63.22:1101,63,0	1/1:1,17:17:42.14:735,42,0	0/0:24,0:24:60.18:0,60,752	0/0:43,0:43:99:0,123,1563	0/0:16,0:16:39.12:0,39,497	0/0:33,0:33:75.20:0,75,920	0/0:22,0:22:66.21:0,66,841	0/0:25,0:25:72.21:0,72,902	1/1:3,24:26:66.23:1153,66,0	0/0:21,0:21:63.18:0,63,787	0/0:25,0:25:66.21:0,66,840	0/0:13,0:13:39.12:0,39,497
chr10	8742029	.	CA	C	10848.02	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=14.829;DP=692;FS=9.457;HRun=8;HaplotypeScore=70.2109;InbreedingCoeff=0.9947;MQ=76.62;MQ0=0;MQRankSum=-0.927;QD=25.35;ReadPosRankSum=2.070;VQSLOD=5.4707;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:90.28:0,90,1087	0/0:12,0:12:24.07:0,24,290	0/0:13,0:13:11.73:0,12,268	0/0:18,0:18:39.26:0,39,438	0/0:29,0:29:75.23:0,75,906	0/0:23,0:23:69.21:0,69,834	0/0:32,0:32:90.26:0,90,1074	1/1:3,19:22:57.08:550,57,0	0/0:18,0:18:48.14:0,48,570	1/1:1,37:38:99:1072,111,0	1/1:2,17:19:48.07:462,48,0	1/1:6,28:34:78.12:753,78,0	1/1:0,27:27:78.13:753,78,0	1/1:2,19:21:54.08:521,54,0	1/1:5,37:42:93.15:898,93,0	0/0:33,0:33:99:0,99,1196	0/0:19,0:19:51.16:0,51,616	0/0:11,0:11:27.05:0,27,311	1/1:1,19:20:57.09:550,57,0	1/1:2,28:30:84.05:799,84,0	1/1:2,22:24:66.10:637,66,0	1/1:2,28:30:81.12:782,81,0	1/1:0,23:23:60.10:580,60,0	1/1:2,31:33:84.13:811,84,0	0/0:25,0:25:60.14:0,60,698	1/1:0,29:29:86.99:810,87,0	1/1:5,23:28:66.09:637,66,0	1/1:0,8:8:24.04:232,24,0
chr10	8743324	.	TCTTTCTTCCTTC	T	11650.97	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=5.814;DP=563;FS=5.589;HRun=0;HaplotypeScore=247.3093;InbreedingCoeff=0.7759;MQ=52.58;MQ0=12;MQRankSum=0.600;QD=33.77;ReadPosRankSum=-1.250;VQSLOD=3.8789;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:36.45:0,36,764	0/0:7,0:7:12.04:0,12,204	0/0:16,0:12:23.79:0,24,356	0/0:16,0:12:19.08:0,19,276	0/0:21,0:21:58.72:0,59,894	0/0:16,0:16:13.31:0,13,575	0/0:23,0:22:27.16:0,27,707	1/1:41,0:35:87.21:1259,87,0	0/0:21,0:21:47.25:0,47,1002	1/1:22,0:22:58.42:900,58,0	1/1:18,0:18:45.07:681,45,0	1/1:11,6:17:45.15:1016,45,0	1/1:20,5:25:66.23:1552,66,0	1/1:15,5:20:44.94:855,45,0	1/1:14,0:14:38.96:674,39,0	0/0:20,0:20:20.48:0,20,924	0/0:22,0:22:66.01:0,66,960	0/0:12,0:12:33.09:0,33,482	0/1:23,0:20:64.55:381,0,65	1/1:23,0:23:50.59:586,51,0	0/1:11,0:10:99:240,0,130	1/1:26,0:25:42.47:532,42,0	1/1:14,0:14:38.88:475,39,0	0/1:15,0:15:77.79:298,0,78	0/0:20,0:20:56.22:0,56,886	1/1:29,0:29:76.09:889,76,0	1/1:30,0:29:61.77:793,62,0	1/1:16,1:17:38.17:522,38,0
chr10	8743328	.	TCTTCCTTC	T	13439.42	PASS	AB=1.000;AC=32;AF=0.571;AN=56;BaseQRankSum=6.502;DP=536;FS=9.383;HRun=0;HaplotypeScore=188.6418;InbreedingCoeff=0.7393;MQ=51.84;MQ0=12;MQRankSum=0.363;QD=37.33;ReadPosRankSum=-1.307;VQSLOD=3.3563;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:14.35:0,14,780	0/0:6,0:6:12.04:0,12,252	0/0:15,0:11:23.73:0,24,356	0/0:15,0:11:19.08:0,19,276	0/0:22,0:22:44.16:0,44,887	0/1:13,0:13:0.72:1,0,601	0/1:22,0:20:11.43:11,0,713	1/1:7,33:34:93.17:1304,93,0	0/0:22,0:21:43.64:0,44,899	1/1:21,0:21:56.29:783,56,0	1/1:16,0:16:45.01:663,45,0	1/1:15,0:15:44.83:577,45,0	1/1:25,0:25:69.14:1158,69,0	1/1:17,0:17:44.55:526,45,0	1/1:15,0:15:42.05:665,42,0	0/0:20,0:20:23.91:0,24,1028	0/0:22,0:22:66.04:0,66,948	0/0:12,0:12:33.09:0,33,500	1/1:22,0:19:53.07:647,53,0	1/1:17,4:21:57.17:1056,57,0	0/1:10,0:9:94.08:361,0,94	1/1:15,10:24:63.19:1135,63,0	1/1:13,0:13:38.73:459,39,0	0/1:14,0:14:46.39:322,0,46	0/0:19,0:19:57.19:0,57,984	1/1:22,7:29:84.27:1753,84,0	1/1:20,7:26:70.47:1250,70,0	1/1:14,1:15:45.07:768,45,0
chr10	8743336	.	CCTTTCTTTCTTTCTTTCTTT	C	5985.73	PASS	AB=1.000;AC=26;AF=0.481;AN=54;BaseQRankSum=-9.647;DP=539;FS=4.071;HRun=0;HaplotypeScore=357.3122;InbreedingCoeff=0.7501;MQ=48.79;MQ0=15;MQRankSum=-4.256;QD=23.20;ReadPosRankSum=2.589;VQSLOD=1.9651;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:21,2:23:36.04:605,36,0	1/1:5,0:5:11.97:192,12,0	./.	0/1:11,0:9:0:0,0,0	1/1:23,0:22:29.91:508,30,0	1/1:13,1:14:27:549,27,0	1/1:18,0:16:20.91:429,21,0	0/0:41,0:35:30.46:0,30,340	0/0:23,0:23:39.05:0,39,832	1/1:25,0:25:41.32:640,41,0	1/1:17,0:17:21.54:192,22,0	0/0:17,0:17:38.30:0,38,675	0/0:26,0:26:51.04:0,51,704	0/0:17,0:17:36.09:0,36,642	0/1:16,0:16:28.09:28,0,275	1/1:19,1:20:42.06:857,42,0	1/1:20,0:20:32.32:345,32,0	0/1:9,0:9:5.89:181,0,6	0/0:23,0:17:39.11:0,39,1207	0/0:19,0:19:39.02:0,39,883	0/0:10,0:9:9.03:0,9,426	0/0:23,0:22:39.12:0,39,991	1/1:19,0:19:13.30:497,13,0	0/1:15,0:15:25.95:26,0,330	1/1:23,0:23:50.88:937,51,0	0/0:30,0:30:66.20:0,66,1647	0/0:26,0:25:57.09:0,57,940	0/0:15,0:15:24.08:0,24,559
chr10	8743387	.	TTC	T	12780.68	PASS	AB=0.579;AC=51;AF=0.911;AN=56;BaseQRankSum=0.828;DP=541;FS=17.414;HRun=0;HaplotypeScore=119.2508;InbreedingCoeff=0.6822;MQ=50.74;MQ0=12;MQRankSum=-0.085;QD=26.03;ReadPosRankSum=5.106;VQSLOD=4.9514;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,23:25:57.18:702,57,0	1/1:2,3:5:6.02:74,6,0	0/0:23,0:9:13.86:0,14,234	0/0:26,0:10:27.08:0,27,381	1/1:3,21:24:11.23:635,11,0	1/1:1,16:17:42.13:517,42,0	1/1:1,12:11:27.08:332,27,0	1/1:5,19:23:54.03:601,54,0	1/1:4,15:18:42.13:508,42,0	1/1:3,21:22:51.16:627,51,0	1/1:0,15:15:45.10:537,45,0	1/1:6,17:23:48.15:591,48,0	1/1:2,20:22:60.19:734,60,0	1/1:5,9:14:18.06:222,18,0	1/1:0,17:17:45.14:554,45,0	1/1:5,16:21:39.12:479,39,0	1/1:4,20:24:51.16:628,51,0	1/1:1,12:13:33.10:406,33,0	1/1:7,9:14:26.54:287,27,0	1/1:4,17:21:54.17:664,54,0	0/1:3,8:10:6.23:241,0,6	1/1:5,20:24:45.14:553,45,0	1/1:1,19:20:54.17:664,54,0	1/1:5,14:19:9.54:452,10,0	1/1:4,22:26:45.14:552,45,0	1/1:7,22:29:66.21:812,66,0	1/1:7,12:18:30.98:371,31,0	1/1:3,1:4:3.01:37,3,0
chr10	8743651	.	G	GA	5310.61	PASS	AB=1.000;AC=21;AF=0.389;AN=54;BaseQRankSum=-10.347;DP=566;FS=0.718;HRun=9;HaplotypeScore=60.8868;InbreedingCoeff=0.8941;MQ=79.49;MQ0=0;MQRankSum=-0.366;QD=22.99;ReadPosRankSum=-0.576;VQSLOD=5.3347;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:44.99:0,45,391	0/0:6,0:6:15:0,15,130	0/1:20,0:20:25.49:25,0,87	0/0:10,0:11:5.95:0,6,51	0/0:28,0:28:74.98:0,75,651	0/0:27,1:28:44.80:0,45,618	0/0:14,0:14:35.97:0,36,308	1/1:8,23:31:69.17:751,69,0	0/0:14,0:14:32.99:0,33,286	0/0:25,0:25:65.92:0,66,563	0/0:17,0:18:44.02:0,44,371	1/1:4,10:14:27.07:299,27,0	1/1:0,12:13:38.94:412,39,0	1/1:3,12:15:10.04:339,10,0	0/0:22,0:22:56.97:0,57,491	0/0:22,2:24:32.80:0,33,513	0/0:41,1:42:77.72:0,78,890	0/0:19,0:18:50.98:0,51,442	1/1:1,20:22:59.99:636,60,0	1/1:4,27:32:79.26:834,79,0	1/1:4,9:13:14.91:243,15,0	1/1:1,17:18:48.13:531,48,0	0/0:21,0:21:44.96:0,45,391	0/0:14,0:14:38.99:0,39,339	0/0:33,0:33:89.94:0,90,774	1/1:5,18:23:28.07:529,28,0	1/1:6,23:29:23.09:711,23,0	./.
chr10	8744302	.	CA	C	7119.13	PASS	AB=0.739;AC=32;AF=0.571;AN=56;BaseQRankSum=-14.868;DP=655;FS=4.019;HRun=10;HaplotypeScore=78.9968;InbreedingCoeff=0.9063;MQ=66.41;MQ0=7;MQRankSum=0.069;QD=18.35;ReadPosRankSum=0.166;VQSLOD=5.5142;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:3,0:22:54.43:0,54,294	0/0:2,0:11:25.57:0,26,128	0/0:40,0:12:18.59:0,19,176	0/1:41,2:14:4.07:4,0,104	0/0:4,0:33:81.83:0,82,426	0/0:5,0:19:48.85:0,49,291	0/0:4,0:26:51.17:0,51,255	1/1:4,18:22:50.96:439,51,0	0/0:5,0:20:28.41:0,28,142	1/1:2,27:29:80.98:703,81,0	1/1:2,9:11:26.99:234,27,0	1/1:2,24:26:59.99:521,60,0	1/1:4,25:29:59.26:585,59,0	1/1:2,15:17:38.97:339,39,0	1/1:6,22:28:29.80:488,30,0	0/0:7,0:25:42.95:0,43,251	0/0:4,0:28:62.70:0,63,332	0/0:3,0:20:39.92:0,40,207	1/1:3,18:21:33.12:412,33,0	1/1:5,24:30:40.83:571,41,0	0/1:1,11:12:0.18:227,0,0	1/1:1,26:28:77.01:657,77,0	1/1:1,23:24:56.98:495,57,0	1/1:1,7:8:15:130,15,0	0/0:2,0:23:45.45:0,45,227	1/1:2,24:26:65.93:568,66,0	1/1:4,19:23:53.95:464,54,0	1/1:0,11:11:32.97:282,33,0
chr10	8746439	.	GGC	G	14637.13	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=14.276;DP=626;FS=4.361;HRun=0;HaplotypeScore=78.7038;InbreedingCoeff=0.9992;MQ=85.31;MQ0=0;MQRankSum=-3.239;QD=45.04;ReadPosRankSum=1.593;VQSLOD=6.4914;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,163,3254	0/0:9,0:9:27.09:0,27,548	0/0:23,0:23:69.09:0,69,1280	0/0:25,0:24:69.17:0,69,1273	0/0:25,0:25:75.24:0,75,1468	0/0:20,0:20:57.17:0,57,1086	0/0:30,0:30:90.31:0,90,1827	1/1:0,28:28:84.28:1349,84,0	0/0:25,0:25:75.26:0,75,1505	1/1:0,18:18:54.18:881,54,0	1/1:0,14:14:39.13:635,39,0	1/1:0,21:21:60.20:978,60,0	1/1:0,18:18:51.17:830,51,0	1/1:0,24:24:54.18:881,54,0	1/1:0,23:23:63.22:1028,63,0	0/0:21,0:21:63.22:0,63,1278	0/0:30,0:30:90.28:0,90,1789	0/0:23,0:23:69.24:0,69,1384	1/1:0,25:25:75.18:1118,75,0	1/1:0,31:31:84.29:1364,84,0	1/1:0,10:10:21.07:343,21,0	1/1:0,16:16:48.16:783,48,0	1/1:0,19:19:54.18:880,54,0	1/1:0,26:26:69.24:1126,69,0	0/0:16,0:16:48.13:0,48,902	1/1:0,22:22:66.23:1074,66,0	1/1:0,20:20:54.18:879,54,0	1/1:0,10:10:30.10:489,30,0
chr10	8748278	.	GGTGTGT	G	1838.86	PASS	AB=0.913;AC=17;AF=0.327;AN=52;BaseQRankSum=5.812;DP=593;FS=12.749;HRun=0;HaplotypeScore=117.2515;InbreedingCoeff=0.7846;MQ=69.59;MQ0=13;MQRankSum=-5.960;QD=9.58;ReadPosRankSum=2.079;VQSLOD=1.9464;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:24:26.61:0,27,557	0/0:13,0:13:12.04:0,12,289	./.	0/0:30,0:19:1.25:0,1,3	0/0:20,0:20:30.10:0,30,851	0/0:21,0:24:30.10:0,30,730	0/0:17,0:17:21.07:0,21,592	0/0:19,0:19:0.47:0,0,1	0/0:14,0:14:30.09:0,30,751	0/0:14,0:20:21.07:0,21,515	0/0:12,0:14:12.04:0,12,272	1/1:12,8:20:15.05:301,15,0	1/1:13,4:18:11.65:181,12,0	1/1:12,8:20:9.03:183,9,0	0/0:18,0:27:18.06:0,18,501	0/0:20,0:21:17.19:0,17,576	0/0:21,0:21:47.69:0,48,1338	0/0:18,0:21:30.57:0,31,810	1/1:23,7:27:21.07:361,21,0	1/1:14,8:22:15.05:237,15,0	1/1:28,0:26:1.43:15,1,0	1/1:5,7:13:24.08:383,24,0	0/0:16,0:16:21.05:0,21,476	0/0:21,0:34:18.06:0,18,424	0/0:22,0:22:30.10:0,30,799	0/1:19,2:20:63.53:84,0,64	1/1:12,8:19:15.05:279,15,0	./.
chr10	8748464	.	C	CG	2245.68	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=12.479;DP=606;FS=0.000;HRun=0;HaplotypeScore=87.0417;InbreedingCoeff=0.8826;MQ=59.22;MQ0=19;MQRankSum=-7.002;QD=20.60;ReadPosRankSum=-2.814;VQSLOD=4.3238;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:42:99:0,123,1625	0/0:7,0:7:21.07:0,21,289	0/1:19,0:11:18.73:19,0,79	0/0:16,0:10:14.51:0,15,141	0/0:30,0:30:81.04:0,81,1016	0/0:23,0:23:66.19:0,66,868	0/0:24,0:22:63.03:0,63,801	0/0:25,0:23:57.12:0,57,745	0/0:14,0:13:39.07:0,39,504	1/1:7,15:22:62.71:827,63,0	1/1:11,15:24:29.75:404,30,0	0/0:18,0:18:51.15:0,51,664	0/0:17,0:17:51.11:0,51,641	0/0:19,0:19:56.33:0,56,703	1/1:6,10:16:35.98:452,36,0	0/0:19,0:19:48.15:0,48,653	0/0:25,0:25:75.15:0,75,935	0/0:26,0:25:63.07:0,63,855	0/0:23,0:19:54.11:0,54,692	0/0:32,0:32:90.25:0,90,1168	0/0:14,0:12:36.08:0,36,452	0/0:28,0:28:78.21:0,78,996	1/1:3,11:14:24:334,24,0	1/1:6,6:11:29.87:388,30,0	0/0:25,0:25:72.05:0,72,898	0/0:35,0:32:92.42:0,92,1184	0/0:23,0:22:66.19:0,66,876	0/0:8,0:8:24.02:0,24,294
chr10	8748482	.	A	AAAAAG	5307.24	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=10.807;DP=634;FS=0.000;HRun=0;HaplotypeScore=122.1059;InbreedingCoeff=0.9761;MQ=61.49;MQ0=17;MQRankSum=-11.950;QD=55.28;ReadPosRankSum=-0.602;VQSLOD=4.5906;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:41:99:0,107,2056	0/0:7,0:7:21.05:0,21,391	0/0:34,0:19:50.25:0,50,610	0/0:25,0:15:6.50:0,6,366	0/0:29,0:29:81.16:0,81,1491	0/0:25,0:24:72.23:0,72,1430	0/0:18,0:18:45.15:0,45,918	0/0:33,0:33:81.23:0,81,1518	0/0:15,0:14:42.14:0,42,855	1/1:5,12:19:51.08:1241,51,0	1/1:8,22:31:60.12:1596,60,0	0/0:12,0:12:36.11:0,36,699	0/0:25,0:25:66.23:0,66,1331	0/0:17,0:17:45.13:0,45,847	1/1:3,9:15:24.08:684,24,0	0/0:19,0:19:45.13:0,45,846	0/0:29,0:29:78.19:0,78,1475	0/0:27,0:26:54.09:0,54,979	0/0:20,0:19:42.14:0,42,819	0/0:33,0:33:96.27:0,96,1812	0/0:15,0:13:39.11:0,39,756	0/0:24,0:24:63.20:0,63,1206	1/1:3,12:15:30.10:864,30,0	1/1:3,11:13:33.11:921,33,0	0/0:26,0:26:78.25:0,78,1493	0/0:33,0:30:85.77:0,86,1486	0/0:19,0:18:48.11:0,48,929	0/0:10,0:10:26.69:0,27,544
chr10	8749361	.	C	CA	5724.07	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=15.297;DP=686;FS=1.187;HRun=1;HaplotypeScore=91.2233;InbreedingCoeff=0.9979;MQ=97.61;MQ0=0;MQRankSum=-5.701;QD=42.72;ReadPosRankSum=1.587;VQSLOD=4.9075;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,111,1531	0/0:11,0:11:33.10:0,33,442	0/0:36,0:36:99:0,102,1355	0/0:36,0:35:90.28:0,90,1191	0/0:18,0:18:54.18:0,54,749	0/0:27,0:27:72.18:0,72,964	0/0:38,0:38:99:0,114,1583	0/0:26,0:26:69.19:0,69,940	0/0:21,0:21:63.21:0,63,879	1/1:4,23:27:75.16:1120,75,0	1/1:1,16:17:42.14:671,42,0	0/0:26,0:26:66.22:0,66,922	0/0:27,0:27:81.27:0,81,1126	0/0:29,0:29:84.27:0,84,1151	1/1:1,42:43:99:1919,120,0	0/0:22,0:22:66.22:0,66,920	0/0:30,0:30:84.28:0,84,1168	0/0:14,0:14:32.25:0,32,460	0/0:12,0:12:36.12:0,36,499	0/0:16,0:16:45.15:0,45,629	0/0:27,0:27:75.22:0,75,1023	0/0:19,0:19:57.14:0,57,757	1/1:0,17:17:45.15:719,45,0	1/1:0,30:30:81.28:1295,81,0	0/0:25,0:25:69.23:0,69,962	0/0:27,1:28:33.27:0,33,1022	0/0:17,0:17:51.17:0,51,710	0/0:7,0:7:18.06:0,18,251
chr10	8749443	.	AACACAC	A	630.06	PASS	AB=0.918;AC=11;AF=0.212;AN=52;BaseQRankSum=-0.722;DP=583;FS=10.779;HRun=0;HaplotypeScore=139.1134;InbreedingCoeff=0.1464;MQ=62.91;MQ0=13;MQRankSum=-0.460;QD=3.39;ReadPosRankSum=-1.081;VQSLOD=2.0238;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:36,3:38:12.99:38,0,13	1/1:9,4:13:6.02:120,6,0	./.	./.	0/0:11,1:11:5.51:0,6,48	1/1:13,0:14:9.88:89,10,0	0/1:21,7:27:9.21:121,0,9	0/0:22,0:21:5.91:0,6,38	0/1:19,0:19:20.07:35,0,20	0/0:14,0:14:18.01:0,18,349	0/0:13,0:13:10.31:0,10,233	0/0:29,0:28:30.20:0,30,388	0/0:12,0:12:3.46:0,3,24	0/0:20,0:20:12.04:0,12,260	0/0:23,0:23:21.04:0,21,422	0/1:11,2:13:11.16:100,0,11	0/1:27,0:27:94.48:156,0,94	0/1:17,0:16:16.34:110,0,16	0/0:17,0:16:3.01:0,3,51	0/0:16,0:16:6:0,6,99	0/0:36,0:36:30.07:0,30,543	0/0:4,0:17:8.99:0,9,92	0/0:12,0:13:9.03:0,9,251	0/0:34,0:34:23.94:0,24,533	0/1:12,2:15:0:0,0,0	0/0:21,0:21:27.56:0,28,619	0/0:15,0:15:23.58:0,24,373	0/0:2,0:9:5.98:0,6,98
chr10	8750412	.	GC	G	3754.18	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=14.959;DP=617;FS=1.885;HRun=1;HaplotypeScore=137.1634;InbreedingCoeff=0.9961;MQ=88.73;MQ0=0;MQRankSum=-12.522;QD=36.81;ReadPosRankSum=-0.498;VQSLOD=3.1550;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:57:99:0,169,2679	0/0:18,0:18:54.15:0,54,835	0/0:25,0:25:75.22:0,75,1150	0/0:23,0:23:59.38:0,59,830	0/0:22,0:22:66.17:0,66,1002	0/0:13,0:13:39.12:0,39,601	0/0:20,0:20:60.20:0,60,955	0/0:31,0:31:90.29:0,90,1398	0/0:30,0:30:90.31:0,90,1435	1/1:0,19:19:57.19:796,57,0	1/1:1,26:27:75.25:1039,75,0	0/0:17,0:17:51.17:0,51,815	0/0:18,0:18:54.13:0,54,806	0/0:25,0:25:75.24:0,75,1174	1/1:1,27:28:75.25:1040,75,0	0/0:16,0:16:48.16:0,48,765	0/0:29,0:29:87.30:0,87,1391	0/0:14,0:14:39.13:0,39,624	0/0:13,0:13:39.13:0,39,621	0/0:28,0:28:81.25:0,81,1248	0/0:25,0:25:75.23:0,75,1151	0/0:15,0:15:45.15:0,45,706	1/1:0,20:20:48.16:670,48,0	1/1:0,8:8:14.93:209,15,0	0/0:17,0:17:51.13:0,51,765	0/0:23,0:23:69.22:0,69,1076	0/0:22,0:22:63.20:0,63,984	0/0:14,0:14:36.12:0,36,575
chr10	8750440	.	C	CAG	3893.17	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=13.688;DP=618;FS=8.735;HRun=0;HaplotypeScore=143.1902;InbreedingCoeff=0.9799;MQ=83.09;MQ0=0;MQRankSum=-13.042;QD=35.72;ReadPosRankSum=1.761;VQSLOD=5.1705;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:57:99:0,162,2243	0/0:19,0:19:56.96:0,57,765	0/0:21,0:21:59.96:0,60,777	0/0:19,0:19:13.71:0,14,449	0/0:19,0:19:45.15:0,45,643	0/0:13,0:13:39.13:0,39,559	0/0:23,0:23:66.17:0,66,889	0/0:32,0:32:81.25:0,81,1126	0/0:26,0:26:78.25:0,78,1099	1/1:3,18:21:63.22:1136,63,0	1/1:6,17:23:24.07:409,24,0	0/0:24,0:24:69.23:0,69,987	0/0:14,0:14:39.12:0,39,541	0/0:29,0:29:81.25:0,81,1140	1/1:3,31:35:81.28:1475,81,0	0/0:16,0:16:48.13:0,48,651	0/0:27,0:27:81.26:0,81,1140	0/0:13,0:13:39.13:0,39,559	0/0:25,0:25:75.12:0,75,946	0/0:13,0:13:39.11:0,39,540	0/0:31,0:31:87.29:0,87,1246	0/0:18,0:18:54.18:0,54,772	1/1:6,14:20:24.08:436,24,0	1/1:1,9:10:23.95:437,24,0	0/0:13,0:13:39.13:0,39,559	0/0:22,1:23:8.93:0,9,805	0/0:19,0:19:54.17:0,54,755	0/0:15,0:15:45.15:0,45,642
chr10	8750870	.	TTC	T	6442.63	PASS	AB=1.000;AC=46;AF=0.821;AN=56;BaseQRankSum=0.409;DP=423;FS=41.510;HRun=0;HaplotypeScore=68.6550;InbreedingCoeff=0.5976;MQ=78.26;MQ0=5;MQRankSum=-0.934;QD=20.99;ReadPosRankSum=2.991;VQSLOD=3.0880;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,10:17:16.32:326,16,0	1/1:1,7:8:21.06:253,21,0	0/0:43,0:26:45.56:0,46,638	0/0:43,1:32:6.47:0,6,498	1/1:3,9:12:24.07:290,24,0	1/1:4,11:15:24.07:290,24,0	1/1:7,7:14:23.81:265,24,0	1/1:14,12:27:38.95:448,39,0	0/0:17,0:17:42.14:0,42,674	0/1:10,0:10:33.46:33,0,39	1/1:7,0:7:1.92:31,2,0	1/1:0,10:11:29.92:340,30,0	1/1:5,11:16:30.09:362,30,0	1/1:1,5:5:12.04:145,12,0	1/1:14,0:14:11.50:98,11,0	1/1:2,9:11:18.06:217,18,0	1/1:6,20:26:56.96:664,57,0	1/1:6,11:17:33.07:383,33,0	1/1:4,9:13:27.08:321,27,0	1/1:1,5:6:15.05:181,15,0	1/1:1,14:15:39.12:468,39,0	1/1:2,5:7:15.05:181,15,0	0/1:9,0:9:27.33:27,0,30	0/0:11,0:11:0.77:0,1,52	1/1:1,6:7:15.05:181,15,0	1/1:4,7:11:20.96:253,21,0	1/1:1,13:14:27.08:326,27,0	1/1:3,10:13:30.09:362,30,0
chr10	8750886	.	CTCT	C	456.43	PASS	AB=0.795;AC=7;AF=0.125;AN=56;BaseQRankSum=7.614;DP=448;FS=13.916;HRun=0;HaplotypeScore=99.8312;InbreedingCoeff=0.5276;MQ=63.74;MQ0=7;MQRankSum=-5.842;QD=9.51;ReadPosRankSum=0.093;VQSLOD=2.2360;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:42.59:0,43,284	0/0:8,0:8:22.16:0,22,118	0/0:59,0:27:67.87:0,68,1243	0/0:54,0:27:46.35:0,46,1025	0/0:9,0:9:21.89:0,22,93	0/0:16,0:15:27.96:0,28,155	0/0:11,0:11:16.17:0,16,141	0/0:22,0:22:43.11:0,43,388	0/0:18,0:18:54.10:0,54,1144	0/1:4,4:8:1.86:98,0,2	1/1:4,5:9:17.64:130,18,0	0/0:15,0:15:24.79:0,25,242	0/0:15,0:15:36.41:0,36,238	0/0:8,0:7:19.99:0,20,146	1/1:4,9:13:2.69:228,3,0	0/0:10,0:10:19.28:0,19,106	0/0:26,0:26:63.22:0,63,388	0/0:13,0:13:33.29:0,33,170	0/0:14,0:14:39.84:0,40,285	0/0:8,0:8:22.74:0,23,188	0/0:20,0:20:48.70:0,49,304	0/0:7,0:7:19.73:0,20,120	0/1:7,2:9:19.82:84,0,20	0/1:8,1:9:10.45:48,0,10	0/0:9,0:9:22.75:0,23,180	0/0:11,0:11:29.83:0,30,185	0/0:15,0:15:30.28:0,30,175	0/0:14,0:14:33.94:0,34,191
chr10	8750969	.	C	CGGTGGT	596.90	PASS	AC=20;AF=0.526;AN=38;BaseQRankSum=0.633;DP=244;FS=1.435;HRun=0;HaplotypeScore=54.8855;InbreedingCoeff=0.5342;MQ=67.82;MQ0=7;MQRankSum=-2.839;QD=7.75;ReadPosRankSum=-1.398;VQSLOD=1.4759;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:21.07:0,21,416	0/0:1,0:1:3.01:0,3,60	./.	./.	0/0:5,0:5:6.02:0,6,120	0/0:12,0:12:6.02:0,6,120	0/0:16,0:16:12.04:0,12,230	./.	1/1:4,2:6:6.02:130,6,0	1/1:7,1:8:3.48:95,3,0	./.	1/1:4,0:4:3.01:62,3,0	./.	./.	1/1:5,0:5:3:25,3,0	0/0:7,0:7:9.03:0,9,180	0/0:18,0:18:18.06:0,18,360	0/0:6,0:6:6.02:0,6,120	1/1:3,0:4:3.01:78,3,0	./.	1/1:15,0:15:3.01:37,3,0	./.	1/1:3,1:3:3.01:96,3,0	1/1:11,1:11:3.01:81,3,0	0/0:9,0:10:9.02:0,9,127	1/1:8,0:8:3.01:51,3,0	1/1:10,0:11:3.01:78,3,0	./.
chr10	8751264	.	CA	C	534.38	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.641;DP=643;FS=0.000;HRun=1;HaplotypeScore=60.0948;InbreedingCoeff=0.9897;MQ=77.73;MQ0=0;MQRankSum=-0.551;QD=28.13;ReadPosRankSum=0.885;VQSLOD=3.3013;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,114,1798	0/0:13,0:13:39.12:0,39,600	0/0:13,0:13:21.08:0,21,398	0/0:17,0:17:36.13:0,36,601	0/0:18,0:18:54.17:0,54,840	0/0:20,0:20:57.16:0,57,864	0/0:46,0:46:99:0,135,2111	0/0:21,0:21:63.21:0,63,1004	1/1:0,19:19:45.15:629,45,0	0/0:22,0:22:63.21:0,63,1008	0/0:8,0:8:24.07:0,24,361	0/0:24,0:24:72.23:0,72,1124	0/0:28,0:28:84.29:0,84,1330	0/0:28,0:28:84.26:0,84,1294	0/0:44,0:44:99:0,129,2058	0/0:26,0:26:78.25:0,78,1223	0/0:30,0:29:90.29:0,90,1414	0/0:24,0:23:69.24:0,69,1103	0/0:29,0:29:87.24:0,87,1319	0/0:22,0:22:63.21:0,63,1007	0/0:32,0:32:96.28:0,96,1497	0/0:19,0:19:57.16:0,57,864	0/0:13,0:13:36.09:0,36,528	0/0:27,0:27:78.21:0,78,1196	0/0:17,0:17:45.14:0,45,696	0/0:20,0:20:60.20:0,60,939	0/0:17,0:17:51.13:0,51,785	0/0:7,0:7:21.07:0,21,336
chr10	8753339	.	G	GA	2864.61	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=10.855;DP=590;FS=1.902;HRun=8;HaplotypeScore=63.7854;InbreedingCoeff=0.8732;MQ=74.03;MQ0=0;MQRankSum=-0.244;QD=23.48;ReadPosRankSum=-0.904;VQSLOD=4.0372;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,108,983	0/0:11,0:11:33.02:0,33,302	0/0:12,0:12:11.05:0,11,174	0/1:13,0:13:10.98:11,0,127	0/0:27,0:27:78.04:0,78,714	0/0:22,0:22:60.03:0,60,549	0/0:13,0:13:36.01:0,36,329	0/0:30,0:30:78.02:0,78,710	0/0:16,0:16:45.02:0,45,411	1/1:6,25:31:75.21:856,75,0	1/1:3,17:20:48.14:549,48,0	0/0:20,0:20:51.02:0,51,466	0/0:22,0:22:57:0,57,517	0/0:17,0:17:45.02:0,45,411	1/1:3,16:19:39.12:450,39,0	0/0:15,0:15:45.02:0,45,411	0/0:27,0:27:75.02:0,75,681	0/0:12,0:12:30.01:0,30,274	0/0:18,0:18:42.02:0,42,384	0/0:30,0:30:87.05:0,87,796	0/0:10,0:10:18.01:0,18,165	0/0:36,0:36:99:0,102,929	1/1:3,22:25:63.19:727,63,0	1/1:0,14:14:39.12:450,39,0	0/0:26,0:26:78.04:0,78,714	0/0:18,0:18:10.41:0,10,347	0/0:36,0:36:93.04:0,93,851	0/0:7,0:7:15.01:0,15,137
chr10	8754526	.	CTG	C	3947.55	PASS	AB=0.661;AC=26;AF=0.464;AN=56;BaseQRankSum=-3.598;DP=708;FS=0.448;HRun=0;HaplotypeScore=147.2492;InbreedingCoeff=0.7919;MQ=66.64;MQ0=3;MQRankSum=-0.855;QD=11.51;ReadPosRankSum=3.081;VQSLOD=3.5438;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:17,18:36:12.84:306,0,13	1/1:4,7:10:15.04:170,15,0	0/0:28,0:14:6.02:0,6,92	0/0:23,0:16:2.97:0,3,20	1/1:26,16:44:40.72:412,41,0	1/1:14,10:26:35.55:347,36,0	1/1:12,13:25:27.08:305,27,0	0/0:25,0:26:27.53:0,28,336	1/1:10,0:20:19.89:98,20,0	1/1:9,10:19:33.08:365,33,0	1/1:15,10:25:5.89:68,6,0	0/0:9,0:26:26.84:0,27,235	0/0:8,0:20:26.98:0,27,233	0/0:12,0:32:38.35:0,38,319	1/1:9,5:16:14.09:122,14,0	1/1:7,17:26:41.78:435,42,0	1/1:9,17:29:56.64:585,57,0	1/1:6,9:16:26.78:285,27,0	0/0:15,0:20:20.69:0,21,186	0/0:19,0:34:37.06:0,37,298	0/0:12,0:28:27:0,27,250	0/0:11,0:30:29.45:0,29,262	1/1:13,7:22:20.89:217,21,0	0/1:14,12:28:18.97:233,0,19	0/0:29,0:29:50.42:0,50,726	0/0:15,0:30:62.46:0,62,571	0/0:15,0:28:21.67:0,22,223	0/0:5,0:9:8.99:0,9,77
chr10	8754563	.	TGCTCATGTATGA	T	2162.05	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=4.839;DP=563;FS=22.524;HRun=0;HaplotypeScore=237.2579;InbreedingCoeff=0.9084;MQ=56.32;MQ0=3;MQRankSum=-6.641;QD=25.44;ReadPosRankSum=2.497;VQSLOD=1.4139;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:46.83:0,47,2587	0/0:9,0:9:24.08:0,24,1163	0/0:12,0:4:11.40:0,11,237	0/0:15,0:6:17.73:0,18,353	0/0:34,0:34:78.27:0,78,4152	0/0:24,0:23:61.45:0,61,3269	0/0:21,0:21:45.05:0,45,2485	0/0:18,0:18:45.15:0,45,2008	0/0:15,0:15:29.95:0,30,1771	1/1:8,15:23:45.15:1410,45,0	1/1:5,8:13:6.02:197,6,0	0/0:18,0:18:30.10:0,30,1561	0/0:22,0:22:54.19:0,54,2864	0/0:25,0:25:48.16:0,48,2492	1/1:4,6:10:9.03:321,9,0	0/0:22,0:22:57.20:0,57,3003	0/0:27,0:27:63.22:0,63,3278	0/0:22,0:22:57.20:0,57,3078	0/0:16,0:16:42.14:0,42,1952	0/0:26,0:26:58.25:0,58,2782	0/0:21,0:21:36.12:0,36,2122	0/0:23,0:23:41.89:0,42,1757	1/1:7,10:17:9.03:257,9,0	1/1:15,7:22:6:131,6,0	0/0:21,0:21:48.16:0,48,2794	0/0:19,0:19:51.18:0,51,2907	0/0:27,0:27:54.19:0,54,3004	0/0:11,0:11:21.07:0,21,1250
chr10	8754576	.	GCT	G	252.93	PASS	AB=0.844;AC=6;AF=0.107;AN=56;BaseQRankSum=7.679;DP=562;FS=22.659;HRun=0;HaplotypeScore=146.3698;InbreedingCoeff=0.2156;MQ=64.15;MQ0=1;MQRankSum=-6.611;QD=2.72;ReadPosRankSum=2.162;VQSLOD=0.9110;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:47.88:0,48,894	0/0:8,0:8:24.08:0,24,460	0/0:15,0:13:30.76:0,31,482	0/0:11,0:8:20.10:0,20,345	0/0:33,0:33:87.30:0,87,1677	0/0:24,0:24:69.24:0,69,1313	0/0:21,0:21:54.19:0,54,1043	0/0:20,0:20:60.20:0,60,1119	0/0:15,0:15:35.97:0,36,695	0/1:21,2:23:99:208,0,125	0/1:11,5:16:39.72:40,0,64	0/0:16,0:16:33.11:0,33,638	0/0:23,0:23:66.23:0,66,1262	0/0:24,0:24:51.17:0,51,983	1/1:7,2:9:8.63:45,9,0	0/0:22,0:22:63.22:0,63,1217	0/0:27,0:27:81.28:0,81,1552	0/0:22,0:22:63.22:0,63,1211	0/0:16,0:16:48.16:0,48,927	0/0:28,0:28:76.31:0,76,1369	0/0:22,0:22:45.15:0,45,869	0/0:24,0:24:50.63:0,51,965	0/1:21,4:25:55.02:55,0,126	0/1:16,4:20:30.18:30,0,39	0/0:20,0:20:54.19:0,54,1042	0/0:18,0:18:54.19:0,54,1043	0/0:24,0:24:60.21:0,60,1157	0/0:10,0:10:24.08:0,24,463
chr10	8754739	.	A	ATGTGTGTATAGGTGATAC	19782.68	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-2.189;DP=696;FS=0.882;HRun=0;HaplotypeScore=318.5656;InbreedingCoeff=0.9921;MQ=81.21;MQ0=0;MQRankSum=-13.331;QD=140.30;ReadPosRankSum=1.280;VQSLOD=4.0949;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:75.22:0,75,3393	0/0:8,0:8:24.06:0,24,1108	0/0:26,0:26:75.26:0,75,2752	0/0:27,0:27:68.26:0,68,2654	0/0:28,0:28:72.25:0,72,3466	0/0:30,0:30:87.30:0,87,4047	0/0:21,0:21:57.20:0,57,2551	0/0:32,0:32:93.32:0,93,4328	0/0:21,0:21:63.22:0,63,2839	1/1:21,8:34:93.32:6205,93,0	1/1:19,14:34:48.16:4200,48,0	0/0:22,0:22:60.21:0,60,2997	0/0:33,0:33:96.33:0,96,4476	0/0:27,0:27:81.28:0,81,3869	1/1:16,10:27:57.20:4190,57,0	0/0:35,0:35:99:0,99,4248	0/0:20,0:20:54.18:0,54,2335	0/0:8,0:8:18.04:0,18,621	0/0:16,0:16:48.12:0,48,2106	0/0:22,0:22:57.20:0,57,2820	0/0:36,0:36:99:0,102,4812	0/0:28,0:28:72.25:0,72,3569	1/1:15,12:30:45.15:3940,45,0	1/1:15,1:16:15.05:1247,15,0	0/0:31,0:31:93.32:0,93,4361	0/0:23,0:23:66.22:0,66,3044	0/0:28,0:28:81.27:0,81,3743	0/0:8,0:8:18.06:0,18,936
chr10	8756266	.	G	GA	6157.54	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-15.440;DP=749;FS=0.000;HRun=3;HaplotypeScore=71.7793;InbreedingCoeff=0.9975;MQ=72.85;MQ0=0;MQRankSum=-1.935;QD=37.32;ReadPosRankSum=2.508;VQSLOD=5.2920;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,129,1505	0/0:8,0:8:18.05:0,18,216	0/0:13,0:13:30.08:0,30,351	0/0:20,0:20:39.48:0,39,445	0/0:21,0:21:57.17:0,57,684	0/0:33,0:33:96.29:0,96,1152	0/0:30,0:30:87.25:0,87,1031	0/0:27,0:27:78.22:0,78,918	0/0:23,0:23:69.20:0,69,817	1/1:4,39:43:99:1622,117,0	1/1:3,20:23:57.10:754,57,0	0/0:25,0:25:66.17:0,66,777	0/0:26,0:26:75.23:0,75,900	0/0:23,0:23:69.19:0,69,813	1/1:0,32:32:93.31:1303,93,0	0/0:26,0:26:78.24:0,78,936	0/0:16,0:16:48.15:0,48,576	0/0:14,0:14:36.11:0,36,431	0/0:27,0:27:75.20:0,75,885	0/0:32,0:32:93.27:0,93,1104	0/0:26,0:26:72.22:0,72,864	0/0:33,0:33:93.28:0,93,1116	1/1:0,28:28:72.24:1008,72,0	1/1:1,38:39:99:1471,105,0	0/0:34,0:34:99:0,99,1166	0/0:23,1:24:24.18:0,24,714	0/0:40,0:40:99:0,102,1224	0/0:14,0:14:42.13:0,42,504
chr10	8756778	.	TA	T	1728.58	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=11.102;DP=579;FS=0.000;HRun=11;HaplotypeScore=69.7584;InbreedingCoeff=0.8761;MQ=72.42;MQ0=1;MQRankSum=0.810;QD=16.31;ReadPosRankSum=1.403;VQSLOD=4.4048;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:45.95:0,46,522	0/0:11,0:11:30.08:0,30,320	0/0:20,0:19:6.04:0,6,258	0/0:14,0:12:1.18:0,1,76	0/0:23,0:23:60.12:0,60,619	0/0:23,1:24:38.52:0,39,614	0/0:23,0:25:65.83:0,66,668	0/0:20,1:21:51.05:0,51,509	0/0:23,0:24:62.99:0,63,654	1/1:1,18:19:50.93:419,51,0	1/1:4,18:24:57.96:449,58,0	0/0:13,0:13:36.09:0,36,384	0/0:27,0:27:69.11:0,69,708	0/0:21,1:22:29.48:0,29,504	1/1:2,17:19:38.95:321,39,0	0/0:17,0:17:47.94:0,48,485	0/0:22,0:22:63.16:0,63,671	0/0:13,0:13:26.38:0,26,314	0/0:15,0:16:7.25:0,7,234	0/0:37,0:38:96.08:0,96,985	0/0:14,0:14:11.78:0,12,327	0/0:25,3:28:32.44:0,32,531	1/1:5,20:25:21.92:386,22,0	1/1:5,13:19:40.98:326,41,0	0/0:11,1:13:5.30:0,5,246	0/0:28,1:29:44.50:0,45,659	0/0:24,2:26:22.88:0,23,641	0/0:8,0:9:23.87:0,24,230
chr10	8757232	.	ATG	A	1202.04	PASS	AC=8;AF=0.148;AN=54;BaseQRankSum=4.869;DP=664;FS=6.004;HRun=0;HaplotypeScore=104.1915;InbreedingCoeff=0.8054;MQ=75.00;MQ0=7;MQRankSum=0.242;QD=12.65;ReadPosRankSum=0.552;VQSLOD=2.8695;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:72.19:0,72,1101	0/0:10,0:9:27.09:0,27,428	0/0:35,1:26:9.08:0,9,650	0/0:47,1:37:26.94:0,27,1025	0/0:28,0:28:41.15:0,41,597	0/0:25,0:25:51.17:0,51,809	0/0:29,0:29:57.04:0,57,833	0/0:37,0:36:99:0,99,1548	0/0:23,0:23:42.14:0,42,666	1/1:9,13:22:39.12:488,39,0	./.	0/0:15,0:15:29.87:0,30,349	0/0:21,0:21:51.03:0,51,583	0/0:25,0:25:56.16:0,56,640	1/1:28,0:27:60.19:778,60,0	0/0:21,0:20:48.12:0,48,685	0/0:20,0:20:42.07:0,42,561	0/0:29,0:29:63.80:0,64,844	0/0:19,0:18:33.10:0,33,481	0/0:17,0:17:36.11:0,36,529	0/0:35,0:33:71.95:0,72,905	0/0:13,0:12:15.05:0,15,226	1/1:2,15:17:3.01:39,3,0	1/1:1,27:28:3.01:36,3,0	0/0:17,0:17:27.07:0,27,409	0/0:14,0:14:12.15:0,12,266	0/0:24,0:24:53.04:0,53,623	0/0:14,0:13:0.83:0,1,244
chr10	8757242	.	GTA	G	674.63	PASS	AB=0.950;AC=14;AF=0.259;AN=54;BaseQRankSum=11.012;DP=684;FS=49.842;HRun=0;HaplotypeScore=114.4488;InbreedingCoeff=0.3552;MQ=58.65;MQ0=21;MQRankSum=-1.381;QD=2.71;ReadPosRankSum=-2.678;VQSLOD=-0.0863;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:42,0:40:79.64:80,0,671	0/0:11,0:10:26.99:0,27,251	0/0:25,0:15:35.64:0,36,356	0/0:39,0:28:63.53:0,64,613	0/0:27,0:27:44.60:0,45,352	0/0:30,0:30:19.25:0,19,526	0/0:26,0:25:48.58:0,49,445	0/0:37,0:35:82.87:0,83,827	0/0:28,0:28:28.05:0,28,422	1/1:18,0:18:40.37:224,40,0	./.	0/0:16,0:16:6.89:0,7,135	0/0:24,0:24:26.25:0,26,219	0/0:26,1:27:26.68:0,27,230	1/1:26,0:25:56.89:286,57,0	0/0:23,0:22:8.12:0,8,390	0/0:25,0:22:6.78:0,7,312	0/0:30,0:28:13.34:0,13,447	0/1:20,0:17:10.94:11,0,207	0/0:15,1:16:33.37:0,33,286	0/1:38,0:36:4.18:4,0,333	0/0:16,1:15:14.94:0,15,119	1/1:19,0:19:2.90:16,3,0	1/1:38,0:35:11.65:84,12,0	0/0:18,0:17:23.99:0,24,309	0/1:8,6:14:39.74:40,0,90	0/1:24,0:24:34.09:34,0,218	0/1:10,0:9:61.94:62,0,109
chr10	8757244	.	ATG	A	1493.23	PASS	AB=0.975;AC=25;AF=0.481;AN=52;BaseQRankSum=-0.169;DP=691;FS=4.503;HRun=0;HaplotypeScore=113.5891;InbreedingCoeff=0.0218;MQ=57.56;MQ0=26;MQRankSum=-0.381;QD=3.16;ReadPosRankSum=2.886;VQSLOD=2.2914;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:44,0:41:9.07:9,0,321	0/0:11,0:10:5.93:0,6,40	./.	./.	0/0:28,0:27:3.07:0,3,47	0/0:31,0:31:23.06:0,23,170	0/1:26,0:25:35.62:51,0,36	0/1:36,0:34:0.33:0,0,1	0/0:28,0:28:13.88:0,14,123	1/1:20,0:19:11.14:138,11,0	0/0:16,0:15:2.84:0,3,14	0/1:16,0:16:28.11:91,0,28	0/1:25,0:25:27.76:173,0,28	0/1:29,0:29:22.05:181,0,22	1/1:26,0:25:35.78:292,36,0	0/0:24,0:23:8.53:0,9,115	0/1:24,0:21:44.21:44,0,113	0/1:31,0:28:76.28:76,0,157	0/1:19,0:16:0.31:34,0,0	0/1:16,0:16:17.57:18,0,25	0/1:37,0:34:12.89:103,0,13	0/1:9,8:15:0:0,0,0	1/1:19,0:19:2.99:25,3,0	0/1:39,0:36:19.24:55,0,19	0/0:18,0:17:14.94:0,15,125	1/1:14,0:14:15.43:89,15,0	1/1:24,0:24:11.42:206,11,0	1/1:10,0:9:8.38:67,8,0
chr10	8757279	.	TGA	T	444.69	PASS	AB=0.962;AC=16;AF=0.308;AN=52;BaseQRankSum=-0.678;DP=540;FS=17.844;HRun=0;HaplotypeScore=116.4911;InbreedingCoeff=0.1442;MQ=48.17;MQ0=31;MQRankSum=0.066;QD=1.88;ReadPosRankSum=-1.375;VQSLOD=1.1841;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:40:42.77:0,43,457	0/0:4,0:3:2.99:0,3,23	./.	./.	0/1:20,0:19:5.49:5,0,122	0/0:26,0:26:14.98:0,15,126	0/0:23,0:22:4.54:0,5,142	0/1:19,0:16:16.60:17,0,38	0/0:22,0:22:8.99:0,9,76	1/1:15,0:13:12.68:77,13,0	1/1:13,0:11:20.43:133,20,0	0/0:24,0:24:21.01:0,21,207	0/0:27,0:26:5.88:0,6,203	0/0:27,0:26:21.32:0,21,220	0/1:15,13:27:0:0,0,0	0/0:26,0:26:38.81:0,39,331	0/0:25,0:22:23.90:0,24,186	0/0:25,0:21:17.37:0,17,189	0/0:12,0:10:12.14:0,12,92	0/1:9,0:9:12.42:12,0,55	0/1:22,0:20:2.50:3,0,160	0/1:19,0:17:16.16:16,0,104	0/1:16,0:16:10.04:52,0,10	1/1:31,0:27:11.98:127,12,0	0/0:16,0:15:15:0,15,144	0/1:14,0:15:27.92:51,0,28	0/1:21,0:21:17.14:67,0,17	0/1:9,0:7:9.15:42,0,9
chr10	8758128	.	G	GA	15219.57	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-13.409;DP=610;FS=3.673;HRun=6;HaplotypeScore=55.8683;InbreedingCoeff=0.9988;MQ=78.88;MQ0=0;MQRankSum=-4.208;QD=33.30;ReadPosRankSum=2.676;VQSLOD=5.1365;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,26:26:75.24:943,75,0	1/1:0,10:10:24.08:302,24,0	0/0:25,0:25:58.36:0,58,579	0/0:16,0:16:35.64:0,36,337	1/1:1,32:33:87.28:1092,87,0	1/1:1,26:27:72.23:906,72,0	1/1:1,14:15:39.12:491,39,0	1/1:3,37:40:99:1365,111,0	0/0:15,0:15:45.09:0,45,452	0/0:24,0:24:72.16:0,72,734	0/0:17,0:17:45.03:0,45,437	1/1:2,34:36:99:1245,99,0	1/1:0,15:15:39.12:491,39,0	1/1:0,17:17:48.15:604,48,0	0/0:17,0:17:45.06:0,45,449	1/1:1,17:18:48.15:603,48,0	1/1:2,9:11:24.08:302,24,0	1/1:1,9:10:24.08:302,24,0	1/1:2,14:16:42.13:517,42,0	1/1:4,39:43:99:1414,114,0	1/1:1,10:11:30.10:377,30,0	1/1:0,32:32:90.12:1090,90,0	0/0:22,0:22:54.12:0,54,550	0/0:17,0:17:51.12:0,51,520	1/1:0,25:25:63.20:792,63,0	1/1:1,20:21:32.58:723,33,0	1/1:4,32:35:90.29:1132,90,0	1/1:1,14:15:42.13:528,42,0
chr10	8758268	.	ACTAG	A	4122.98	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=11.988;DP=661;FS=0.000;HRun=0;HaplotypeScore=107.4954;InbreedingCoeff=0.9865;MQ=92.97;MQ0=2;MQRankSum=-4.418;QD=44.33;ReadPosRankSum=3.300;VQSLOD=4.2076;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,129,3397	0/0:12,0:12:36.12:0,36,971	0/0:27,0:27:66.17:0,66,1616	0/0:31,0:30:75.10:0,75,1824	0/0:29,0:29:81.28:0,81,2149	0/0:29,0:29:84.27:0,84,2199	0/0:18,0:18:48.15:0,48,1240	0/0:40,0:40:99:0,120,3111	0/0:25,0:25:69.22:0,69,1775	1/1:4,18:21:51.15:934,51,0	1/1:1,14:15:33.11:626,33,0	0/0:30,0:30:87.28:0,87,2246	0/0:20,0:20:57.20:0,57,1507	0/0:22,0:22:63.22:0,63,1690	1/1:2,19:20:48.16:911,48,0	0/0:21,0:21:57.18:0,57,1482	0/0:25,0:25:72.25:0,72,1934	0/0:16,0:16:42.14:0,42,1134	0/0:23,0:23:66.22:0,66,1693	0/0:20,0:20:60.18:0,60,1500	0/0:38,0:38:99:0,114,2975	0/0:20,0:20:57.20:0,57,1539	1/1:0,15:15:42.14:797,42,0	1/1:0,20:20:45.10:854,45,0	0/0:16,0:16:45.15:0,45,1182	0/0:22,0:22:66.23:0,66,1753	0/0:33,0:33:96.31:0,96,2474	0/0:5,0:5:9.03:0,9,242
chr10	8759453	.	G	GACACAC	3559.92	PASS	AB=0.909;AC=42;AF=0.840;AN=50;BaseQRankSum=-0.137;DP=580;FS=0.000;HRun=0;HaplotypeScore=204.7455;InbreedingCoeff=0.1824;MQ=64.80;MQ0=8;MQRankSum=-1.507;QD=7.24;ReadPosRankSum=-0.082;VQSLOD=2.0800;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:25:14.66:270,15,0	./.	./.	./.	0/1:20,2:24:0:0,0,0	1/1:21,0:25:3.47:79,3,0	1/1:26,0:29:3.89:80,4,0	1/1:34,0:34:23.69:276,24,0	0/1:10,0:14:48.39:103,0,48	1/1:25,0:24:11.63:146,12,0	0/1:13,0:13:9.61:26,0,10	1/1:15,0:25:12.03:196,12,0	1/1:14,5:20:6.02:133,6,0	1/1:17,1:21:8.67:204,9,0	1/1:17,0:17:6.02:182,6,0	1/1:21,2:31:15.52:370,16,0	1/1:13,0:15:6.49:122,6,0	1/1:14,0:16:6.02:116,6,0	1/1:9,1:10:4.73:100,5,0	1/1:16,1:17:5.32:191,5,0	1/1:22,0:21:12.01:183,12,0	0/0:16,3:19:0.47:0,0,1	0/1:17,0:17:0:0,0,0	1/1:31,0:31:5.94:55,6,0	1/1:10,0:14:6.02:156,6,0	1/1:22,0:22:21.92:362,22,0	1/1:15,1:21:10.39:209,10,0	0/0:4,0:4:0.89:0,1,2
chr10	8759495	.	C	CACAG	2239.40	PASS	AB=0.976;AC=26;AF=0.464;AN=56;BaseQRankSum=7.765;DP=546;FS=7.112;HRun=0;HaplotypeScore=163.8231;InbreedingCoeff=-0.2895;MQ=67.29;MQ0=11;MQRankSum=-6.090;QD=5.32;ReadPosRankSum=0.329;VQSLOD=2.1922;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:22:49.45:128,0,49	0/0:7,0:6:8.98:0,9,74	0/0:26,0:18:44.57:0,45,390	0/0:28,0:18:34.22:0,34,366	0/0:21,0:21:35.76:0,36,286	0/1:28,0:28:6.15:6,0,163	0/0:23,0:23:10.21:0,10,300	0/1:37,0:37:99:148,0,565	0/1:11,0:11:99:111,0,139	1/1:6,11:19:40.13:486,40,0	1/1:3,8:15:5.61:106,6,0	0/1:21,0:21:99:147,0,173	0/0:20,0:20:4.72:0,5,246	0/1:20,0:19:73.82:152,0,74	1/1:2,0:17:5.74:128,6,0	0/1:20,0:20:99:112,0,147	0/1:18,0:18:60.88:61,0,154	0/1:17,0:15:54.33:54,0,155	0/1:9,0:9:15.68:16,0,115	0/1:17,0:17:15.74:16,0,102	0/1:21,0:20:77.47:77,0,160	0/1:21,0:21:14.80:15,0,72	0/1:4,10:16:0.32:0,0,0	1/1:21,0:24:29.71:302,30,0	0/1:17,0:16:99:102,0,133	0/1:15,0:15:79.97:80,0,173	0/1:32,0:32:99:120,0,330	0/1:4,0:3:17.47:37,0,17
chr10	8761024	.	C	CCA	8053.36	PASS	AB=0.706;AC=32;AF=0.571;AN=56;BaseQRankSum=-4.874;DP=753;FS=12.355;HRun=0;HaplotypeScore=139.6056;InbreedingCoeff=-0.3418;MQ=63.70;MQ0=15;MQRankSum=-0.741;QD=12.56;ReadPosRankSum=-0.370;VQSLOD=4.2016;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:23,16:39:38.89:573,39,0	0/1:9,5:14:46.77:209,0,47	0/0:43,0:27:18:0,18,180	0/0:35,0:14:9.01:0,9,92	0/1:15,9:22:46.78:208,0,47	0/1:14,9:24:99:317,0,110	0/1:12,10:23:88.88:295,0,89	1/1:20,12:32:6.49:474,6,0	0/0:10,0:34:34.05:0,34,167	1/1:29,0:28:51.76:298,52,0	1/1:28,0:28:11.50:90,11,0	0/1:26,19:45:26.50:1132,0,26	0/1:10,11:21:65.63:377,0,66	0/1:15,7:22:71.66:290,0,72	1/1:31,0:30:28.75:227,29,0	0/1:10,19:30:99:695,0,103	0/1:7,10:17:31.90:208,0,32	0/1:16,5:27:89.36:362,0,89	0/1:11,4:17:20.09:97,0,20	0/1:11,6:18:99:149,0,112	0/1:23,21:44:87.66:603,0,88	0/1:8,7:15:29.82:209,0,30	1/1:19,0:20:11.46:79,11,0	1/1:24,0:24:23.52:167,24,0	0/1:16,8:24:38.14:302,0,38	0/1:24,10:33:64.08:344,0,64	0/1:11,8:20:99:273,0,103	0/1:7,0:9:75.85:76,0,83
chr10	8761071	.	C	CAT	470.54	PASS	AB=0.689;AC=2;AF=0.036;AN=56;BaseQRankSum=5.997;DP=765;FS=0.000;HRun=0;HaplotypeScore=175.2188;InbreedingCoeff=-0.0375;MQ=70.38;MQ0=3;MQRankSum=-5.706;QD=9.60;ReadPosRankSum=0.490;VQSLOD=3.1386;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:81.23:0,81,1275	0/0:10,0:10:30.10:0,30,488	0/0:38,0:30:87.06:0,87,1329	0/0:50,0:39:99:0,108,1604	0/0:21,0:21:48.14:0,48,741	0/0:22,0:22:60.18:0,60,920	0/0:27,0:27:75.25:0,75,1195	0/0:32,0:32:90.19:0,90,1320	0/0:36,0:36:96.25:0,96,1479	0/1:16,11:26:99:527,0,559	0/1:11,11:22:32.70:33,0,270	0/0:36,0:35:99:0,102,1616	0/0:24,0:24:69.22:0,69,1100	0/0:25,0:25:72.18:0,72,1089	0/0:33,8:40:27.83:0,28,1267	0/0:31,0:31:87:0,87,1366	0/0:21,0:20:45.15:0,45,733	0/0:21,0:21:63.21:0,63,1020	0/0:20,0:20:57.17:0,57,883	0/0:20,0:20:51.21:0,51,795	0/0:53,0:53:99:0,126,1975	0/0:12,0:12:24.07:0,24,366	0/0:12,12:24:23.58:0,24,386	0/0:23,11:34:18.69:0,19,615	0/0:29,0:29:71.82:0,72,1124	0/0:20,0:20:57.17:0,57,883	0/0:26,0:26:75.22:0,75,1162	0/0:9,0:9:27.09:0,27,440
chr10	8761076	.	AACAC	A	783.04	PASS	AB=0.731;AC=5;AF=0.089;AN=56;BaseQRankSum=8.636;DP=801;FS=28.955;HRun=0;HaplotypeScore=191.7611;InbreedingCoeff=-0.0976;MQ=69.83;MQ0=1;MQRankSum=-8.497;QD=5.12;ReadPosRankSum=-0.321;VQSLOD=0.8406;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:90.31:0,90,2252	0/0:10,0:10:30.10:0,30,793	0/0:38,0:33:88.85:0,89,2197	0/0:46,0:40:99:0,99,2239	0/0:23,0:23:60.20:0,60,1495	0/0:22,0:22:57.20:0,57,1432	0/0:27,0:27:75.26:0,75,1901	0/0:33,0:32:93.32:0,93,2429	0/0:37,0:37:99:0,102,2646	0/1:17,11:27:99:483,0,1075	0/1:11,11:22:99:130,0,405	0/0:38,0:37:99:0,108,2848	0/0:27,0:27:69.21:0,69,1700	0/0:27,0:27:75.26:0,75,1956	0/1:36,8:43:99:163,0,2190	0/0:30,0:30:81.28:0,81,2138	0/0:23,0:22:54.19:0,54,1427	0/0:21,0:21:63.21:0,63,1613	0/0:21,0:21:57.19:0,57,1389	0/0:22,0:22:54.16:0,54,1308	0/0:64,0:64:99:0,163,4077	0/0:15,0:15:45:0,45,974	0/1:11,12:23:99:107,0,624	0/1:25,11:36:16.33:16,0,1104	0/0:30,0:30:75.26:0,75,1971	0/0:23,0:23:69.23:0,69,1755	0/0:23,0:23:66.23:0,66,1777	0/0:11,0:11:33.11:0,33,861
chr10	8762003	.	C	CACAAAACAAA	14109.54	PASS	AB=1.000;AC=41;AF=0.732;AN=56;BaseQRankSum=-9.204;DP=697;FS=0.550;HRun=0;HaplotypeScore=221.3142;InbreedingCoeff=0.8393;MQ=59.70;MQ0=4;MQRankSum=-1.739;QD=26.23;ReadPosRankSum=-1.806;VQSLOD=4.0708;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:38:68.94:745,69,0	1/1:2,0:15:17.56:180,18,0	0/0:35,0:28:21.06:0,21,461	0/1:32,0:19:1.29:1,0,146	1/1:12,0:24:35.32:308,35,0	1/1:8,0:20:24.05:240,24,0	1/1:14,0:42:45.09:465,45,0	1/1:35,0:33:53.99:1379,54,0	0/0:6,0:23:45.15:0,45,1048	0/0:3,0:16:21.04:0,21,311	0/0:2,0:14:17.85:0,18,330	1/1:8,13:28:9.03:446,9,0	1/1:5,18:24:39.13:1935,39,0	1/1:12,11:26:15.05:743,15,0	0/0:4,0:29:46.04:0,46,984	1/1:8,0:18:17.98:169,18,0	1/1:22,0:33:3:30,3,0	1/1:9,0:20:24.05:274,24,0	1/1:20,6:31:43.72:1137,44,0	1/1:9,13:25:23.99:933,24,0	1/1:17,0:17:14.94:161,15,0	1/1:4,18:23:42.14:1878,42,0	0/0:8,0:20:9.49:0,9,190	0/0:6,0:22:5.16:0,5,78	1/1:7,0:26:33.07:329,33,0	1/1:10,15:27:47.98:1566,48,0	1/1:11,12:25:21.07:1042,21,0	1/1:0,4:8:3.01:149,3,0
chr10	8762701	.	GTATGTATGTATGTA	G	1208.11	PASS	AB=0.949;AC=15;AF=0.313;AN=48;BaseQRankSum=1.678;DP=656;FS=44.177;HRun=0;HaplotypeScore=296.4305;InbreedingCoeff=0.0600;MQ=48.84;MQ0=36;MQRankSum=1.537;QD=4.52;ReadPosRankSum=-0.819;VQSLOD=0.9983;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:6,20:25:2.94:0,3,18	0/1:2,10:11:10.97:11,0,31	./.	./.	0/0:5,27:29:0.47:0,0,1	./.	0/0:5,19:21:3.01:0,3,50	0/0:42,0:28:51.20:0,51,501	0/1:11,0:11:16.47:16,0,78	0/0:28,0:28:73.14:0,73,1822	0/1:17,0:16:5.87:6,0,949	0/1:33,0:33:99:195,0,269	0/0:36,0:36:6.11:0,6,448	0/1:23,0:22:10.75:11,0,260	0/0:25,0:24:71.74:0,72,1970	1/1:3,20:21:3.01:129,3,0	1/1:20,0:17:30.10:579,30,0	1/1:4,8:10:11.97:307,12,0	0/1:16,0:15:6.36:6,0,216	0/0:20,0:20:12.98:0,13,296	0/1:27,0:23:7.18:7,0,322	0/0:29,0:29:37.07:0,37,356	0/0:16,0:16:40.99:0,41,1066	0/0:25,0:25:63.04:0,63,2030	./.	0/1:43,0:42:31.71:32,0,640	0/1:30,0:29:56.11:56,0,463	0/0:16,0:16:12.06:0,12,375
chr10	8762705	.	GTA	G	704.76	PASS	AB=0.866;AC=14;AF=0.292;AN=48;BaseQRankSum=7.664;DP=643;FS=20.670;HRun=0;HaplotypeScore=201.8951;InbreedingCoeff=-0.2466;MQ=48.33;MQ0=42;MQRankSum=-2.723;QD=2.13;ReadPosRankSum=0.675;VQSLOD=1.2468;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:24:1.82:0,2,5	0/0:12,0:11:3.01:0,3,43	./.	./.	0/1:30,0:27:0.01:0,0,0	./.	0/0:24,0:21:3:0,3,25	0/0:32,0:18:14.12:0,14,457	0/0:8,0:8:9:0,9,112	0/0:28,0:28:80.10:0,80,852	0/0:18,0:17:22.69:0,23,446	0/1:28,4:32:99:119,0,384	0/1:29,6:35:99:114,0,598	0/1:15,8:23:53.17:53,0,242	0/0:26,0:25:73.59:0,74,817	1/1:24,0:21:2.84:14,3,0	0/1:23,0:19:11.92:12,0,197	0/1:13,0:10:20.59:21,0,81	0/1:12,3:14:96.76:97,0,221	0/1:15,5:20:8.69:9,0,407	0/1:27,0:23:41.79:42,0,265	0/0:17,4:29:3.80:0,4,420	0/0:14,0:14:35.93:0,36,482	0/0:25,0:25:60.86:0,61,747	./.	0/1:19,11:40:99:257,0,619	0/1:24,6:29:30.75:31,0,517	0/1:13,4:17:70.66:71,0,359
chr10	8762709	.	GTATGTA	G	3125.67	PASS	AB=0.890;AC=23;AF=0.479;AN=48;BaseQRankSum=1.465;DP=657;FS=35.130;HRun=0;HaplotypeScore=218.4971;InbreedingCoeff=-0.3092;MQ=48.13;MQ0=44;MQRankSum=0.841;QD=6.46;ReadPosRankSum=-1.401;VQSLOD=0.7088;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:24:2.04:6,2,0	0/0:12,0:11:3.01:0,3,37	0/0:3,0:3:6.02:0,6,74	./.	0/1:30,0:27:0:0,0,0	./.	./.	0/0:34,0:19:28.42:0,28,302	0/0:13,0:13:9.50:0,10,126	0/1:27,0:28:99:220,0,427	0/1:19,0:19:89.17:89,0,241	0/1:27,4:31:78.75:362,0,79	0/1:27,6:33:99:190,0,278	0/1:16,8:23:99:168,0,120	0/1:26,0:26:74.21:74,0,556	1/1:24,0:21:3.01:54,3,0	1/1:22,0:18:30.03:393,30,0	1/1:13,0:10:11.97:158,12,0	0/1:15,3:16:99:233,0,144	0/1:16,5:21:99:126,0,192	0/1:29,0:25:99:133,0,104	0/1:27,4:31:11.94:12,0,212	0/1:15,0:15:31.22:31,0,285	0/0:23,0:25:26.79:0,27,542	./.	0/1:31,11:41:99:534,0,234	0/1:24,6:29:99:245,0,166	0/1:13,4:17:99:243,0,176
chr10	8762713	.	GTA	G	1398.26	PASS	AB=0.988;AC=24;AF=0.462;AN=52;BaseQRankSum=4.492;DP=672;FS=24.939;HRun=0;HaplotypeScore=189.3197;InbreedingCoeff=-0.3274;MQ=48.19;MQ0=44;MQRankSum=-2.702;QD=2.69;ReadPosRankSum=-3.264;VQSLOD=0.9167;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:23,3:23:3.06:8,3,0	0/0:11,1:11:3.01:0,3,37	0/0:5,0:5:12.04:0,12,147	0/0:3,0:1:3.01:0,3,31	0/1:27,3:27:0.01:0,0,0	./.	./.	0/1:40,0:25:31.47:31,0,278	0/0:12,0:12:12.44:0,12,118	0/1:27,0:27:99:109,0,242	0/1:20,0:19:42.05:42,0,153	0/1:29,1:30:99:141,0,139	0/1:34,0:34:42.18:42,0,311	0/1:26,0:25:47.64:48,0,138	0/1:27,0:25:23.86:24,0,321	1/1:20,3:20:3:26,3,0	1/1:7,15:18:27.02:357,27,0	1/1:11,2:10:11.91:108,12,0	0/1:19,0:17:99:117,0,141	0/1:24,0:24:43.02:43,0,222	0/1:30,0:26:54.74:55,0,122	0/0:32,0:32:9.13:0,9,221	0/1:15,0:15:11.43:11,0,161	0/1:24,0:24:55.02:55,0,268	0/0:38,0:37:2.87:0,3,15	0/1:42,0:41:99:147,0,260	0/1:28,2:29:76.47:76,0,205	0/1:17,0:17:99:109,0,176
chr10	8763581	.	C	CT	127.45	PASS	AB=1.000;AC=13;AF=0.813;AN=16;BaseQRankSum=0.751;DP=22;FS=3.680;HRun=1;HaplotypeScore=16.3972;MQ=36.39;MQ0=1;MQRankSum=0.751;QD=9.10;ReadPosRankSum=0.751;VQSLOD=1.1648;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	0/0:2,0:1:3.01:0,3,31	./.	./.	./.	1/1:1,0:1:0.89:2,1,0	./.	./.	0/1:2,0:1:0:0,0,0	1/1:0,2:2:3.01:37,3,0	./.	./.	1/1:1,0:3:6:53,6,0	1/1:2,1:3:4.26:44,4,0	./.	./.	./.	1/1:2,0:1:3.01:43,3,0	./.	./.	./.	./.	./.	1/1:1,0:1:3:25,3,0	./.	./.
chr10	8763765	.	T	TTTG	465.96	PASS	AB=0.774;AC=13;AF=0.232;AN=56;BaseQRankSum=10.600;DP=690;FS=49.533;HRun=0;HaplotypeScore=226.0035;InbreedingCoeff=-0.1932;MQ=55.54;MQ0=11;MQRankSum=-6.820;QD=1.56;ReadPosRankSum=-2.545;VQSLOD=1.0383;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:36:45.98:0,46,740	1/1:4,0:5:1.29:3,1,0	0/0:22,0:13:35.31:0,35,389	0/0:14,0:7:17.79:0,18,189	0/0:16,0:16:13.72:0,14,301	0/0:20,0:22:31.70:0,32,573	0/0:21,0:23:47.92:0,48,625	0/0:20,0:23:5.28:0,5,489	0/1:12,1:22:75.36:75,0,108	0/0:22,0:27:11.08:0,11,553	0/0:15,0:19:24.07:0,24,284	0/1:13,0:28:73.13:73,0,254	0/1:17,0:19:99:100,0,225	0/1:25,0:36:36.98:37,0,374	0/0:19,0:22:35.83:0,36,495	0/0:20,0:22:24.23:0,24,278	0/0:36,0:37:89.53:0,90,1378	0/0:23,0:24:72.20:0,72,1008	0/1:13,0:19:12.15:12,0,379	0/1:22,0:26:9.51:10,0,308	0/1:47,0:60:67.67:68,0,1007	0/1:13,0:15:48.16:106,0,48	0/0:9,0:10:15:0,15,202	0/0:39,0:47:65.78:0,66,974	0/0:24,0:24:19.52:0,20,349	0/1:30,0:33:18.90:19,0,600	0/1:13,0:17:87.68:88,0,133	0/1:3,0:11:21.68:22,0,55
chr10	8763925	.	CA	C	1607.21	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=7.984;DP=574;FS=4.289;HRun=10;HaplotypeScore=68.1096;InbreedingCoeff=0.9656;MQ=76.55;MQ0=0;MQRankSum=-0.042;QD=16.74;ReadPosRankSum=2.169;VQSLOD=4.3296;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:38:76.62:0,77,1069	0/0:5,0:5:15.04:0,15,165	0/0:28,0:22:32.24:0,32,292	0/0:24,1:22:24.23:0,24,206	0/0:25,0:26:65.97:0,66,697	0/0:27,0:26:66.18:0,66,730	0/0:17,0:17:48.13:0,48,531	0/0:29,0:29:75.19:0,75,822	0/0:9,0:11:22.99:0,23,131	1/1:6,10:17:32.02:266,32,0	1/1:2,17:19:41.98:364,42,0	0/0:25,0:25:69.13:0,69,749	0/0:18,0:18:39.11:0,39,431	0/0:23,1:24:37.11:0,37,637	1/1:2,14:16:38.99:339,39,0	0/0:13,0:13:36.06:0,36,385	0/0:20,0:20:54.13:0,54,588	0/0:23,0:23:58.99:0,59,630	0/0:23,0:25:68.84:0,69,716	0/0:21,0:21:51.10:0,51,545	0/0:14,0:15:35.16:0,35,425	0/0:16,0:16:33.06:0,33,350	1/1:6,18:25:49.94:422,50,0	1/1:3,16:19:44.99:391,45,0	0/0:20,0:20:48.10:0,48,518	0/0:21,2:23:5.03:0,5,498	0/0:19,0:18:51.12:0,51,545	0/0:10,0:10:21.06:0,21,232
chr10	8766289	.	CCAGATGTGAAGCAA	C	11280.15	PASS	AB=0.962;AC=13;AF=0.232;AN=56;BaseQRankSum=15.939;DP=857;FS=2.275;HRun=0;HaplotypeScore=332.3863;InbreedingCoeff=0.8996;MQ=83.37;MQ0=0;MQRankSum=-14.773;QD=49.26;ReadPosRankSum=1.448;VQSLOD=3.9859;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,114,7336	0/0:18,0:18:48.16:0,48,3130	0/0:28,0:28:45.15:0,45,2062	0/0:28,0:28:52.46:0,52,2636	0/0:38,0:38:99:0,108,6994	0/0:21,0:21:63.22:0,63,4264	0/0:33,0:33:84.29:0,84,5196	0/0:32,0:32:78.26:0,78,4821	1/1:6,17:23:39.13:1503,39,0	1/1:10,29:39:72.20:2822,72,0	1/1:3,19:22:51.09:1700,51,0	0/0:33,0:33:84.29:0,84,5689	0/0:40,0:40:99:0,111,7373	0/0:23,0:23:66.23:0,66,4079	1/1:5,24:29:48.12:1850,48,0	0/0:38,0:38:99:0,99,6473	0/0:39,0:39:99:0,102,5963	0/0:18,0:18:54.14:0,54,3420	0/0:26,0:26:66.22:0,66,3941	0/0:21,0:21:60.21:0,60,4065	0/0:36,0:36:99:0,102,6551	0/0:38,0:38:99:0,105,7026	1/1:5,29:34:56.89:2216,57,0	1/1:11,20:31:30.06:1080,30,0	0/0:27,0:27:69.21:0,69,4378	0/1:49,2:51:99:109,0,8175	0/0:37,0:37:99:0,99,6163	0/0:10,0:10:30.10:0,30,1905
chr10	8766772	.	G	GC	5415.06	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=14.929;DP=663;FS=4.383;HRun=0;HaplotypeScore=77.5858;InbreedingCoeff=0.9981;MQ=80.38;MQ0=0;MQRankSum=-4.227;QD=42.98;ReadPosRankSum=2.629;VQSLOD=5.6298;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,120,1662	0/0:7,0:7:21.07:0,21,294	0/0:23,0:23:62.50:0,62,799	0/0:19,0:19:54.16:0,54,706	0/0:30,0:30:83.43:0,83,1156	0/0:18,0:18:54.17:0,54,739	0/0:39,0:39:99:0,114,1594	0/0:34,0:34:99:0,102,1427	1/1:0,27:27:81.27:1214,81,0	1/1:0,25:25:75.24:1107,75,0	1/1:0,10:10:27.09:402,27,0	0/0:27,0:27:81.26:0,81,1115	0/0:27,0:27:81.27:0,81,1132	0/0:21,0:21:63.21:0,63,881	1/1:0,21:21:60.20:898,60,0	0/0:25,0:25:75.25:0,75,1048	0/0:29,0:28:87.29:0,87,1216	0/0:23,0:23:69.21:0,69,947	0/0:23,0:23:66.18:0,66,857	0/0:21,0:21:63.20:0,63,865	0/0:35,0:35:99:0,105,1451	0/0:24,0:24:72.23:0,72,991	1/1:1,16:17:42.14:629,42,0	1/1:0,26:26:78.26:1165,78,0	0/0:18,0:18:51.17:0,51,713	0/0:25,0:25:75.23:0,75,1017	0/0:20,0:20:60.20:0,60,839	0/0:7,0:7:21.07:0,21,294
chr10	8767193	.	ATG	A	1141.48	PASS	AB=1.000;AC=14;AF=0.250;AN=56;BaseQRankSum=14.117;DP=599;FS=10.349;HRun=0;HaplotypeScore=133.3478;InbreedingCoeff=0.7986;MQ=65.42;MQ0=18;MQRankSum=-8.448;QD=7.32;ReadPosRankSum=-4.189;VQSLOD=1.9352;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:56.73:0,57,462	0/0:8,0:8:23.89:0,24,187	0/0:41,0:19:20.20:0,20,286	0/0:38,0:16:11.90:0,12,195	0/0:20,0:20:50.72:0,51,393	0/0:28,0:28:71.77:0,72,602	0/0:32,0:31:87.30:0,87,771	0/0:43,0:42:99:0,106,920	1/1:18,0:18:38.02:216,38,0	1/1:14,4:18:44.72:358,45,0	1/1:10,4:14:26.07:146,26,0	0/0:19,0:19:15.49:0,15,206	0/1:39,0:37:47.76:48,0,285	0/1:22,0:22:0.96:1,0,243	1/1:13,12:25:64.69:401,65,0	0/0:20,0:19:38.95:0,39,325	0/0:14,0:14:38.80:0,39,348	0/0:6,0:6:11.97:0,12,96	0/0:14,0:12:29.44:0,29,239	0/0:19,0:19:42.54:0,43,378	0/0:17,0:17:44.92:0,45,420	0/0:14,0:12:15.57:0,16,200	1/1:6,4:10:20.51:120,21,0	1/1:5,3:7:5.87:36,6,0	0/0:16,0:16:35.93:0,36,296	0/0:27,1:27:25.23:0,25,649	0/0:32,0:31:89.35:0,89,952	0/0:6,0:4:8.96:0,9,68
chr10	8767194	.	T	TCA	2358.48	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=12.706;DP=610;FS=4.776;HRun=0;HaplotypeScore=138.6202;InbreedingCoeff=0.9571;MQ=64.92;MQ0=20;MQRankSum=-11.533;QD=28.08;ReadPosRankSum=-4.569;VQSLOD=3.7908;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:56.06:0,56,800	0/0:9,0:9:24.08:0,24,367	0/0:41,0:19:47.84:0,48,611	0/0:38,0:16:34.53:0,35,397	0/0:22,0:22:47.37:0,47,781	0/0:27,0:27:71.56:0,72,1144	0/0:31,0:30:87.29:0,87,1387	0/0:45,0:43:99:0,112,1676	1/1:8,6:14:42.13:533,42,0	1/1:16,0:16:45.08:553,45,0	1/1:12,0:12:27.08:307,27,0	0/0:20,0:20:42.09:0,42,643	0/0:41,0:39:79.57:0,80,1185	0/0:22,0:22:60.20:0,60,957	1/1:23,0:23:66.21:830,66,0	0/0:20,0:19:39.03:0,39,636	0/0:14,0:14:37.48:0,37,583	0/0:6,0:6:12.04:0,12,196	0/0:16,0:14:33.11:0,33,514	0/0:20,0:19:51.17:0,51,825	0/0:19,0:19:44.40:0,44,696	0/0:14,0:12:36.04:0,36,543	1/1:10,0:9:21.06:243,21,0	1/1:9,0:7:6.49:75,6,0	0/0:15,0:15:35.49:0,35,574	0/0:31,0:30:14.24:0,14,1017	0/0:37,0:36:93.19:0,93,1482	0/0:6,0:4:9.03:0,9,147
chr10	8767195	.	GTC	G	761.56	PASS	AB=0.913;AC=13;AF=0.260;AN=50;BaseQRankSum=1.857;DP=647;FS=27.185;HRun=0;HaplotypeScore=150.9720;InbreedingCoeff=0.5260;MQ=62.70;MQ0=20;MQRankSum=-0.577;QD=5.08;ReadPosRankSum=2.068;VQSLOD=1.3858;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:37:9:0,9,78	0/0:14,0:14:2.94:0,3,18	0/0:41,0:19:0:0,0,0	0/0:37,0:15:0.44:0,0,0	0/0:26,0:26:3.01:0,3,39	0/0:29,0:32:5.95:0,6,55	0/0:34,0:33:6:0,6,67	0/0:43,0:41:3.48:0,3,40	0/0:14,0:14:7.46:0,7,32	1/1:16,0:16:11.36:55,11,0	./.	1/1:11,5:19:14.60:126,15,0	1/1:21,17:39:37.30:350,37,0	1/1:13,8:22:23.89:240,24,0	./.	0/0:19,0:22:0:0,0,0	0/0:15,0:15:9:0,9,100	0/0:8,0:8:5.99:0,6,49	1/1:16,1:15:2.13:31,2,0	0/1:19,2:20:34.09:43,0,34	0/0:20,0:21:15:0,15,146	1/1:8,4:12:8.82:66,9,0	./.	0/0:9,0:7:0:0,0,0	0/0:21,0:21:2.37:0,2,9	0/0:30,0:30:22.06:0,22,298	0/0:37,0:36:19.40:0,19,386	0/0:8,0:6:2.94:0,3,18
chr10	8767229	.	CTCTCTCTCTCTCT	C	1535.50	PASS	AB=1.000;AC=10;AF=0.185;AN=54;BaseQRankSum=6.680;DP=608;FS=52.567;HRun=0;HaplotypeScore=219.7801;InbreedingCoeff=0.6847;MQ=47.94;MQ0=29;MQRankSum=-0.915;QD=10.38;ReadPosRankSum=-1.581;VQSLOD=0.8471;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:21.07:0,21,567	0/0:9,0:8:9.03:0,9,220	0/0:24,0:6:13.86:0,14,164	0/0:25,0:7:7.48:0,7,116	0/0:18,0:18:27.09:0,27,709	0/0:21,0:21:21.07:0,21,585	0/0:25,0:24:53.91:0,54,1240	0/0:25,0:24:62.33:0,62,1099	0/1:31,0:27:99:366,0,177	1/1:21,1:19:48.14:888,48,0	./.	0/0:23,0:23:43.03:0,43,1121	0/0:32,0:30:51.11:0,51,1663	0/0:25,0:25:60.19:0,60,1801	1/1:29,3:27:16.22:187,16,0	0/0:23,0:21:33.11:0,33,608	0/0:11,0:11:30.04:0,30,888	0/0:10,0:9:21.05:0,21,668	0/0:25,0:23:66.22:0,66,1584	0/0:24,0:22:53.97:0,54,1190	0/0:13,0:13:33.08:0,33,1137	0/0:17,0:15:39.13:0,39,1098	1/1:15,0:11:9.03:110,9,0	1/1:16,0:10:9.10:111,9,0	0/0:17,0:17:30.10:0,30,546	0/1:32,0:31:32.37:32,0,2791	0/0:44,0:44:99:0,115,3853	0/0:10,0:6:18.06:0,18,442
chr10	8767231	.	CTCTCTCTCTCT	C	1471.67	PASS	AB=0.985;AC=10;AF=0.185;AN=54;BaseQRankSum=6.606;DP=602;FS=54.777;HRun=0;HaplotypeScore=201.2303;InbreedingCoeff=0.7044;MQ=48.62;MQ0=30;MQRankSum=0.082;QD=10.29;ReadPosRankSum=-0.503;VQSLOD=1.1005;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:21.07:0,21,483	0/0:8,0:7:12.04:0,12,216	0/0:24,0:5:13.29:0,13,163	0/0:22,0:6:8.52:0,9,118	0/0:18,0:18:27.09:0,27,628	0/0:22,0:22:24.08:0,24,532	0/0:25,0:24:50.91:0,51,955	0/0:27,0:26:73.98:0,74,1090	0/1:32,0:27:99:366,0,113	1/1:17,3:17:51.15:846,51,0	./.	0/0:22,0:22:42.59:0,43,891	0/0:34,0:32:60.15:0,60,1437	0/0:24,0:24:57.19:0,57,1423	1/1:20,9:23:16.29:187,16,0	0/0:23,0:21:33.10:0,33,486	0/0:12,0:12:30.06:0,30,755	0/0:10,0:9:18.06:0,18,563	0/0:25,0:23:66.20:0,66,1293	0/0:24,0:22:56.94:0,57,972	0/0:13,0:13:33.08:0,33,987	0/0:16,0:14:39.12:0,39,887	1/1:12,4:11:9.03:110,9,0	1/1:12,2:10:9.13:111,9,0	0/0:17,0:18:39.13:0,39,590	0/1:31,1:31:8.71:9,0,2336	0/0:44,0:44:99:0,115,3284	0/0:10,0:7:21.07:0,21,420
chr10	8767241	.	CT	C	1865.26	PASS	AB=1.000;AC=14;AF=0.250;AN=56;BaseQRankSum=9.417;DP=646;FS=100.852;HRun=2;HaplotypeScore=137.7547;InbreedingCoeff=0.7766;MQ=50.30;MQ0=28;MQRankSum=-2.914;QD=10.14;ReadPosRankSum=-2.069;VQSLOD=-0.0182;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:14.21:0,14,199	0/0:9,0:8:10.24:0,10,156	0/0:32,0:8:24.08:0,24,309	0/0:29,0:12:30.45:0,30,333	0/0:18,0:18:36.11:0,36,467	0/1:21,0:21:1.25:1,0,297	0/0:20,0:19:17.15:0,17,452	0/0:35,0:35:99:0,102,1293	1/1:2,28:25:41.90:486,42,0	1/1:4,23:24:72.07:799,72,0	1/1:7,12:12:3.01:37,3,0	0/0:22,0:22:39.91:0,40,414	0/0:33,2:33:47.51:0,48,446	0/0:23,0:23:53.30:0,53,506	1/1:17,18:29:30.85:348,31,0	0/0:24,0:22:36.12:0,36,478	0/0:13,0:13:7.34:0,7,317	0/0:11,0:10:21.07:0,21,289	0/0:27,0:26:74.72:0,75,933	0/0:19,0:17:41.51:0,42,499	0/0:16,0:16:41.04:0,41,479	0/0:19,0:17:41.21:0,41,497	1/1:8,14:15:18.04:208,18,0	1/1:6,13:12:12.03:147,12,0	0/0:20,0:20:33.64:0,34,547	0/0:27,0:26:21.94:0,22,664	0/0:41,0:41:99:0,108,1453	0/1:11,0:8:19.17:19,0,218
chr10	8769511	.	TA	T	5849.52	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=13.981;DP=794;FS=1.044;HRun=2;HaplotypeScore=76.1704;InbreedingCoeff=0.9477;MQ=91.02;MQ0=0;MQRankSum=-2.041;QD=35.45;ReadPosRankSum=1.322;VQSLOD=5.3855;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:58:99:0,169,2450	0/0:6,0:6:15.05:0,15,223	0/0:41,0:41:99:0,120,1731	0/0:22,0:22:63.21:0,63,924	0/0:30,0:30:87.29:0,87,1304	0/0:21,0:21:63.21:0,63,934	0/0:29,0:29:81.26:0,81,1193	0/0:40,0:40:99:0,117,1749	1/1:0,30:30:81.26:1050,81,0	1/1:0,26:26:78.22:982,78,0	1/1:0,26:26:66.21:857,66,0	0/0:30,0:30:90.29:0,90,1329	0/0:30,0:30:87.29:0,87,1299	0/0:27,0:27:75.25:0,75,1124	1/1:0,28:28:81.26:1052,81,0	0/0:36,0:36:99:0,108,1618	0/0:20,0:20:60.20:0,60,898	0/0:13,0:13:33.11:0,33,493	0/0:30,0:30:84.28:0,84,1254	0/0:29,0:29:84.26:0,84,1230	0/0:23,0:23:66.21:0,66,969	0/0:39,0:39:99:0,114,1654	1/1:0,31:31:81.26:1052,81,0	1/1:1,23:24:66.21:857,66,0	0/0:27,0:27:75.25:0,75,1124	0/0:24,2:26:0.39:0,0,1002	0/0:34,0:34:99:0,102,1527	0/0:18,0:18:51.17:0,51,763
chr10	8771889	.	CATATATATATATATATATATATATATAT	C	2148.18	PASS	AB=0.750;AC=19;AF=0.633;AN=30;BaseQRankSum=3.930;DP=180;FS=3.460;HRun=0;HaplotypeScore=129.9230;InbreedingCoeff=0.3112;MQ=56.72;MQ0=3;MQRankSum=1.138;QD=18.36;ReadPosRankSum=-1.328;VQSLOD=2.1803;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	0/0:3,0:3:0.47:0,0,1	./.	./.	./.	1/1:18,18:34:53.86:671,54,0	1/1:8,0:8:2.99:24,3,0	1/1:10,0:18:2.09:61,2,0	1/1:6,0:17:5.61:376,6,0	./.	./.	1/1:2,3:5:3.01:217,3,0	1/1:5,0:6:3.01:193,3,0	./.	0/0:9,0:9:6.91:0,7,760	0/0:8,0:7:15.05:0,15,819	0/0:4,0:4:0:0,0,0	./.	./.	1/1:3,0:3:3.01:120,3,0	0/0:6,0:10:0:0,0,0	./.	./.	1/1:4,2:6:6:241,6,0	1/1:7,8:15:3.01:162,3,0	0/1:2,0:3:34.29:187,0,34
chr10	8772923	.	GTC	G	4651.25	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=12.168;DP=726;FS=9.012;HRun=0;HaplotypeScore=97.0644;InbreedingCoeff=0.9980;MQ=65.69;MQ0=3;MQRankSum=-0.631;QD=29.07;ReadPosRankSum=4.041;VQSLOD=6.5245;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:91.99:0,92,1526	0/0:7,0:7:18.06:0,18,305	0/0:43,0:37:71.13:0,71,1192	0/0:38,0:31:48.70:0,49,845	0/0:22,0:22:60.20:0,60,999	0/0:21,0:19:54.18:0,54,900	0/0:34,0:34:72.23:0,72,1169	0/0:37,0:37:90.77:0,91,1473	1/1:3,27:29:60.19:779,60,0	1/1:3,31:34:90.26:1142,90,0	1/1:2,17:19:36.12:468,36,0	0/0:30,1:31:42.25:0,42,1260	0/0:25,0:25:69.24:0,69,1169	0/0:30,0:30:84.27:0,84,1398	1/1:3,25:28:63.20:819,63,0	0/0:27,0:27:69.24:0,69,1169	0/0:17,0:17:45.15:0,45,765	0/0:11,0:11:30.10:0,30,501	0/0:30,0:29:75.25:0,75,1236	0/0:22,0:22:51.17:0,51,862	0/0:35,0:35:96.31:0,96,1589	0/0:18,0:18:42.14:0,42,709	1/1:2,13:15:30.09:390,30,0	1/1:3,31:34:81.26:1053,81,0	0/0:14,0:14:36.11:0,36,585	0/0:26,0:26:69.22:0,69,1120	0/0:28,0:28:69.21:0,69,1111	0/0:11,0:11:30.10:0,30,504
chr10	8773281	.	ATG	A	569.97	PASS	AB=1.000;AC=18;AF=0.360;AN=50;BaseQRankSum=-2.526;DP=614;FS=1.676;HRun=0;HaplotypeScore=89.6342;InbreedingCoeff=0.5929;MQ=71.32;MQ0=11;MQRankSum=1.031;QD=2.94;ReadPosRankSum=1.557;VQSLOD=2.0618;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:23:8.93:0,9,86	0/0:8,0:8:9.50:0,10,125	./.	./.	0/0:16,0:22:9.02:0,9,103	0/0:20,0:20:19.94:0,20,172	0/0:28,0:28:12.28:0,12,54	1/1:22,0:21:5.18:27,5,0	0/0:21,0:21:5.50:0,6,48	0/0:21,0:21:28.16:0,28,234	0/0:14,0:13:3.89:0,4,35	1/1:4,4:8:2.71:32,3,0	1/1:17,4:21:4.56:37,5,0	0/0:15,8:23:0:0,0,0	0/0:25,0:25:18.97:0,19,174	0/0:16,0:24:2.76:0,3,26	0/0:35,0:35:19.48:0,19,266	0/0:19,0:19:13.45:0,13,126	1/1:19,0:18:11.32:84,11,0	1/1:11,10:20:5.50:64,5,0	1/1:36,0:36:20.84:144,21,0	0/1:12,0:12:17.67:28,0,18	./.	0/0:32,0:30:17.15:0,17,127	0/0:18,0:18:14.67:0,15,115	1/1:23,0:23:0.49:116,0,0	1/1:15,2:19:23.51:198,24,0	0/1:13,0:13:0.70:1,0,5
chr10	8773325	.	ATG	A	959.96	PASS	AB=0.870;AC=11;AF=0.196;AN=56;BaseQRankSum=3.634;DP=605;FS=7.324;HRun=0;HaplotypeScore=87.3915;InbreedingCoeff=0.6936;MQ=52.40;MQ0=14;MQRankSum=1.453;QD=6.86;ReadPosRankSum=3.491;VQSLOD=2.5566;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:23:29.80:0,30,386	0/0:11,0:11:24.08:0,24,354	0/0:35,0:12:35.62:0,36,411	0/0:30,0:13:31.64:0,32,411	0/0:20,0:20:30.08:0,30,427	0/0:30,0:30:37.53:0,38,933	0/0:18,0:18:12.04:0,12,183	0/0:29,0:29:60.20:0,60,929	1/1:14,0:14:2.40:11,2,0	1/1:8,12:20:32.74:341,33,0	0/1:17,0:16:5.36:167,0,5	0/0:11,0:11:19.23:0,19,223	0/0:17,0:17:25.94:0,26,390	0/0:17,0:17:18.06:0,18,266	1/1:17,1:18:11.27:217,11,0	0/0:20,0:20:29.84:0,30,421	0/0:23,0:23:34.92:0,35,501	0/0:20,0:19:30.57:0,31,433	0/0:22,0:21:27.03:0,27,349	0/0:22,0:21:27.84:0,28,361	0/0:39,0:37:61.53:0,62,818	0/0:16,0:16:24.08:0,24,358	0/1:5,9:13:0:0,0,0	1/1:26,0:24:10.45:365,10,0	0/0:24,0:24:36.12:0,36,549	0/1:31,0:30:10.25:10,0,721	0/0:26,0:26:47.60:0,48,614	0/0:10,0:9:18.06:0,18,267
chr10	8773327	.	G	GTA	277.69	PASS	AB=0.939;AC=6;AF=0.107;AN=56;BaseQRankSum=6.470;DP=605;FS=17.756;HRun=0;HaplotypeScore=92.9274;InbreedingCoeff=0.0342;MQ=53.44;MQ0=14;MQRankSum=1.124;QD=2.57;ReadPosRankSum=3.402;VQSLOD=0.3310;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:23:32.82:0,33,410	0/0:11,0:11:26.81:0,27,352	0/0:37,0:14:36.12:0,36,519	0/0:32,0:14:39.03:0,39,500	0/0:21,0:21:33:0,33,431	0/0:29,0:29:20.68:0,21,921	0/0:17,0:17:18.48:0,18,220	0/0:33,0:33:89.58:0,90,1096	0/1:6,8:14:9.42:52,0,9	0/1:20,0:20:99:110,0,106	0/1:18,0:17:72.13:103,0,72	0/0:11,0:11:21.50:0,21,290	0/0:16,0:16:36.03:0,36,483	0/0:17,0:17:18.06:0,18,275	0/1:17,0:17:57.90:58,0,70	0/0:22,0:22:17.13:0,17,418	0/0:23,0:23:46:0,46,545	0/0:20,0:19:34.40:0,34,551	0/0:18,0:17:50.88:0,51,560	0/0:21,0:20:32.94:0,33,473	0/0:38,0:36:75.18:0,75,1016	0/0:16,0:16:33.07:0,33,440	0/1:13,0:12:0:0,0,0	0/1:26,0:24:72.56:73,0,126	0/0:23,0:23:47.09:0,47,629	0/0:32,0:31:64.34:0,64,994	0/0:27,0:27:69.06:0,69,852	0/0:9,0:8:21.06:0,21,299
chr10	8773618	.	T	TTTGTTG	3983.54	PASS	AB=0.581;AC=11;AF=0.196;AN=56;BaseQRankSum=6.381;DP=635;FS=12.464;HRun=0;HaplotypeScore=138.0268;InbreedingCoeff=0.8142;MQ=64.32;MQ0=1;MQRankSum=-6.738;QD=27.47;ReadPosRankSum=-0.167;VQSLOD=2.8883;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:87.19:0,87,1612	0/0:5,0:5:12.04:0,12,250	0/0:22,0:19:18.06:0,18,341	0/0:11,0:10:3:0,3,26	0/0:22,0:22:48.16:0,48,972	0/0:25,0:27:45.15:0,45,871	0/0:13,0:13:27.09:0,27,563	0/0:32,0:33:48.14:0,48,861	0/1:7,0:25:81.06:191,0,81	1/1:14,8:24:29.99:636,30,0	1/1:17,9:27:32.94:858,33,0	0/0:32,0:32:87.20:0,87,1558	0/0:19,0:19:48.16:0,48,966	0/0:30,0:30:66.19:0,66,1254	1/1:14,11:27:33.04:932,33,0	0/0:32,0:32:78.24:0,78,1520	0/0:23,0:23:39.13:0,39,813	0/0:28,0:28:53.11:0,53,972	0/0:23,0:23:57.15:0,57,1012	0/0:21,0:21:54.14:0,54,1049	0/0:11,0:11:27.08:0,27,527	0/0:26,0:26:63.21:0,63,1269	1/1:16,14:31:42.06:1215,42,0	1/1:6,5:11:6.02:151,6,0	0/0:23,0:23:42.14:0,42,876	0/0:23,0:23:57.17:0,57,1084	0/0:26,0:26:54.18:0,54,1091	0/0:5,0:5:12.01:0,12,209
chr10	8775955	.	GCTCA	G	7260.19	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=14.626;DP=749;FS=0.000;HRun=0;HaplotypeScore=131.4313;InbreedingCoeff=0.9930;MQ=85.57;MQ0=0;MQRankSum=-3.283;QD=50.07;ReadPosRankSum=2.814;VQSLOD=5.5621;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,132,3660	0/0:11,0:11:33.11:0,33,913	0/0:31,0:31:81.27:0,81,2046	0/0:24,0:23:43.07:0,43,1371	0/0:32,0:32:93.32:0,93,2575	0/0:25,0:25:72.25:0,72,2014	0/0:31,0:31:90.31:0,90,2489	0/0:39,0:39:99:0,114,3126	0/0:29,0:29:87.30:0,87,2383	1/1:2,26:28:81.26:1570,81,0	1/1:2,18:20:54.19:1078,54,0	0/0:31,0:31:93.32:0,93,2576	0/0:27,0:27:81.26:0,81,2193	0/0:24,0:24:72.25:0,72,2007	1/1:1,38:39:99:1977,99,0	0/0:28,0:28:84.27:0,84,2253	0/0:30,0:30:87.26:0,87,2270	0/0:22,0:22:66.20:0,66,1756	0/0:17,0:17:42.14:0,42,1143	0/0:32,0:32:96.33:0,96,2659	0/0:37,0:37:99:0,108,2907	0/0:25,0:25:72.10:0,72,1919	1/1:0,22:22:60.21:1197,60,0	1/1:1,35:36:72.24:1438,72,0	0/0:13,0:13:39.13:0,39,1091	0/0:24,1:25:12.31:0,12,1839	0/0:16,0:16:48.16:0,48,1332	0/0:9,0:9:27.09:0,27,755
chr10	8778018	.	CTGTGTGTGTG	C	1031.99	PASS	AB=0.806;AC=17;AF=0.327;AN=52;BaseQRankSum=4.808;DP=635;FS=0.954;HRun=0;HaplotypeScore=167.8766;InbreedingCoeff=0.6432;MQ=67.45;MQ0=12;MQRankSum=-5.015;QD=5.49;ReadPosRankSum=-0.529;VQSLOD=2.7561;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:37:21.54:0,22,536	0/0:7,0:7:14.98:0,15,614	0/0:32,0:24:3.01:0,3,44	./.	0/0:16,0:16:21.05:0,21,680	0/0:16,0:17:21.07:0,21,790	0/0:28,0:31:31.33:0,31,1142	1/1:38,0:35:0.67:58,1,0	1/1:17,1:20:9.01:128,9,0	0/0:29,0:28:48.16:0,48,1767	0/0:18,0:17:12.04:0,12,486	0/1:22,1:29:17.65:109,0,18	1/1:13,0:14:3.01:70,3,0	1/1:17,5:22:6.02:164,6,0	0/0:19,0:26:24.08:0,24,976	0/0:19,0:19:24.08:0,24,905	0/0:35,0:38:60.99:0,61,2574	0/0:21,0:21:42.14:0,42,1786	0/0:19,0:17:0.89:0,1,2	1/1:14,6:20:12.02:291,12,0	0/0:29,1:28:0.47:0,0,1	./.	0/0:10,0:10:15.05:0,15,602	0/0:21,0:29:21.05:0,21,849	0/0:21,0:23:42.13:0,42,1491	1/1:16,2:18:3.80:107,4,0	1/1:12,2:14:3.01:89,3,0	1/1:8,5:13:6.02:178,6,0
chr10	8779283	.	TAC	T	7218.85	PASS	AB=0.666;AC=37;AF=0.712;AN=52;BaseQRankSum=-2.176;DP=800;FS=2.368;HRun=0;HaplotypeScore=134.1395;InbreedingCoeff=0.4133;MQ=68.99;MQ0=15;MQRankSum=2.382;QD=12.07;ReadPosRankSum=1.585;VQSLOD=4.9099;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,16:37:4.08:297,4,0	0/1:11,3:16:19.05:204,0,19	./.	./.	1/1:14,13:31:41.61:406,42,0	1/1:18,7:25:26.57:277,27,0	0/1:16,14:31:11.89:98,0,12	1/1:28,0:28:11.86:107,12,0	0/1:14,18:31:10.44:399,0,10	0/0:5,0:28:29.50:0,29,280	0/0:21,0:21:16.54:0,17,147	1/1:8,21:30:56.99:622,57,0	1/1:11,19:32:53.75:551,54,0	1/1:13,26:39:57.14:628,57,0	0/0:4,0:33:2.34:0,2,24	1/1:13,26:43:31.75:717,32,0	1/1:13,16:29:24.07:270,24,0	1/1:8,16:25:35.09:340,35,0	1/1:17,5:22:17.88:183,18,0	0/1:14,13:27:15.92:241,0,16	1/1:16,22:36:36.10:406,36,0	0/1:8,16:27:54.33:262,0,54	0/0:6,0:25:2.81:0,3,18	0/0:24,0:24:14.13:0,14,137	1/1:5,12:17:21.06:237,21,0	1/1:9,13:24:44.75:444,45,0	1/1:13,16:32:47.47:460,47,0	1/1:5,3:7:6.02:68,6,0
chr10	8779444	.	CA	C	10995.88	PASS	AB=1.000;AC=55;AF=0.982;AN=56;BaseQRankSum=2.534;DP=829;FS=3.548;HRun=1;HaplotypeScore=148.2344;InbreedingCoeff=-0.0195;MQ=84.08;MQ0=0;MQRankSum=-2.800;QD=13.26;ReadPosRankSum=6.243;VQSLOD=4.1735;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:29:77.93:422,78,0	1/1:12,0:12:28.25:145,28,0	1/1:23,0:23:12.13:145,12,0	0/1:25,0:25:74.86:173,0,75	1/1:37,0:37:95.18:561,95,0	1/1:33,0:33:71.05:463,71,0	1/1:32,1:33:40.52:410,41,0	1/1:43,0:43:99:498,115,0	1/1:40,2:42:99:636,107,0	1/1:35,2:37:50.21:487,50,0	1/1:19,0:19:54.58:294,55,0	1/1:30,0:30:77.89:428,78,0	1/1:35,1:36:89.05:503,89,0	1/1:37,0:37:95.71:586,96,0	1/1:37,0:37:94.73:510,95,0	1/1:49,1:50:99:705,132,0	1/1:21,0:21:57.91:333,58,0	1/1:18,0:18:43.19:231,43,0	1/1:26,0:26:20.74:237,21,0	1/1:20,0:20:46.15:259,46,0	1/1:45,0:45:99:546,103,0	1/1:28,0:28:52.81:379,53,0	1/1:18,1:19:49.50:326,50,0	1/1:26,0:26:68.78:358,69,0	1/1:25,0:25:60.40:324,60,0	1/1:35,1:36:88.74:444,89,0	1/1:32,0:32:80.57:440,81,0	1/1:10,0:10:28.77:152,29,0
chr10	8780250	.	GTCTCTCTC	G	706.65	PASS	AB=0.912;AC=13;AF=0.342;AN=38;BaseQRankSum=2.052;DP=588;FS=19.099;HRun=0;HaplotypeScore=140.2815;InbreedingCoeff=0.1936;MQ=70.75;MQ0=10;MQRankSum=0.535;QD=3.74;ReadPosRankSum=1.562;VQSLOD=1.7106;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:5.99:0,6,84	0/0:12,0:12:5.93:0,6,60	./.	./.	./.	./.	0/0:25,0:25:12.48:0,12,190	0/0:27,0:27:0.89:0,1,2	0/1:17,1:19:27.98:164,0,28	0/0:23,0:24:15.35:0,15,167	./.	0/1:19,0:20:16.03:27,0,16	1/1:14,2:17:14.89:247,15,0	0/1:17,9:26:17.93:67,0,18	0/0:30,0:30:0:0,0,0	0/1:28,0:28:0.03:0,0,0	0/0:15,0:14:9.03:0,9,159	0/0:8,0:8:0.89:0,1,2	1/1:23,0:22:1.30:64,1,0	0/0:16,0:16:0.47:0,0,1	./.	./.	./.	1/1:21,0:18:2.98:21,3,0	./.	0/1:22,0:23:45.16:149,0,45	1/1:11,0:12:5.95:84,6,0	0/0:11,0:6:3.01:0,3,92
chr10	8780301	.	TCTCTCA	T	1556.68	PASS	AB=1.000;AC=32;AF=0.667;AN=48;BaseQRankSum=-2.182;DP=394;FS=38.192;HRun=0;HaplotypeScore=112.4427;InbreedingCoeff=0.1951;MQ=32.91;MQ0=42;MQRankSum=-0.147;QD=5.35;ReadPosRankSum=2.534;VQSLOD=0.1641;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:16,0:15:12.84:13,0,20	0/1:5,0:5:3.29:19,0,3	./.	./.	0/1:23,0:22:0.16:0,0,0	1/1:17,0:16:1.92:12,2,0	0/0:20,0:14:2.90:0,3,53	1/1:11,0:10:2.94:20,3,0	1/1:16,0:14:17.89:291,18,0	0/1:15,0:14:37.79:72,0,38	./.	1/1:19,0:19:7.11:144,7,0	1/1:23,0:21:19.75:378,20,0	1/1:24,0:21:3.21:65,3,0	0/0:14,9:23:0.42:0,0,1	1/1:12,0:11:2.34:18,2,0	0/1:13,0:10:11.87:12,0,13	1/1:8,0:5:0.81:4,1,0	1/1:11,0:11:8.87:110,9,0	0/0:19,0:19:3.67:0,4,21	./.	1/1:15,0:14:2.90:16,3,0	0/1:13,0:12:0:1,0,0	1/1:12,0:9:3.01:60,3,0	0/0:8,0:8:0.47:0,0,1	1/1:25,0:21:30.33:287,30,0	1/1:13,0:10:11.90:158,12,0	0/0:6,0:1:3.01:0,3,69
chr10	8780308	.	GTGTGT	G	327.87	PASS	AB=0.830;AC=13;AF=0.283;AN=46;BaseQRankSum=2.786;DP=436;FS=10.813;HRun=0;HaplotypeScore=130.5857;InbreedingCoeff=0.2965;MQ=33.66;MQ0=41;MQRankSum=-0.903;QD=2.25;ReadPosRankSum=-0.535;VQSLOD=2.0330;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:12,0:15:23.03:54,0,23	1/1:3,0:3:3.01:45,3,0	./.	./.	0/1:12,4:21:0:0,0,0	1/1:9,5:17:11.16:100,11,0	0/1:18,0:14:8.09:8,0,64	0/0:14,0:13:38.63:0,39,419	0/0:18,0:16:17.46:0,17,285	0/0:13,0:13:29.61:0,30,255	./.	0/0:22,0:22:14.33:0,14,200	0/0:25,0:23:35.65:0,36,500	0/0:28,0:25:10.25:0,10,130	0/1:18,1:23:0.02:0,0,0	1/1:7,5:11:5.46:180,5,0	0/1:11,1:10:36.67:37,0,72	0/1:6,1:4:32.16:32,0,56	0/0:18,0:17:50.72:0,51,660	0/0:25,0:24:17.87:0,18,408	0/0:18,0:12:3.48:0,3,71	0/0:21,0:19:3.01:0,3,94	0/1:10,0:12:0.10:0,0,0	./.	./.	0/0:33,0:30:83.90:0,84,1380	0/0:20,0:17:33.08:0,33,485	0/0:4,0:1:3.01:0,3,69
chr10	8780774	.	A	ATC	28021.90	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-9.368;DP=756;FS=13.876;HRun=0;HaplotypeScore=96.5399;InbreedingCoeff=0.9883;MQ=72.77;MQ0=1;MQRankSum=-7.829;QD=41.27;ReadPosRankSum=6.833;VQSLOD=5.5794;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,28:33:72.30:1243,72,0	1/1:1,11:12:30.10:502,30,0	0/0:33,0:27:13.62:0,14,486	0/0:44,0:40:86:0,86,1048	1/1:4,28:32:66.16:1105,66,0	1/1:1,25:26:63.22:1088,63,0	1/1:1,14:15:36.12:621,36,0	1/1:4,27:31:81.25:1336,81,0	1/1:3,22:25:60.21:1036,60,0	1/1:7,27:34:90.22:1456,90,0	1/1:4,27:31:81.19:1348,81,0	1/1:2,36:38:99:1709,99,0	1/1:3,26:30:69.24:1191,69,0	1/1:5,28:33:75.26:1285,75,0	1/1:2,17:18:51.17:875,51,0	1/1:3,25:28:60.21:1036,60,0	1/1:2,21:23:51.17:880,51,0	1/1:5,16:21:50.83:819,51,0	1/1:5,13:19:45.13:748,45,0	1/1:2,35:37:96.27:1625,96,0	1/1:1,19:20:54.18:932,54,0	1/1:0,29:29:75.09:1257,75,0	1/1:4,21:26:48.15:828,48,0	1/1:0,22:22:48.08:793,48,0	1/1:1,18:19:45.15:777,45,0	1/1:3,24:27:72.19:1152,72,0	1/1:1,29:31:87.30:1500,87,0	1/1:0,18:18:51.17:880,51,0
chr10	8780832	.	A	ATCTGTCTGTCTG	3940.10	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=5.172;DP=788;FS=16.575;HRun=0;HaplotypeScore=305.4786;InbreedingCoeff=0.8466;MQ=61.90;MQ0=6;MQRankSum=-0.669;QD=22.51;ReadPosRankSum=-0.839;VQSLOD=1.2572;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:78.34:0,78,1877	0/0:7,0:7:9.03:0,9,313	0/0:34,0:21:12.86:0,13,245	0/0:28,0:28:20.24:0,20,501	0/0:36,0:37:78.15:0,78,2263	0/0:32,0:32:57.15:0,57,1680	0/0:17,0:17:36.11:0,36,1026	0/0:55,0:55:60.14:0,60,1331	0/0:26,0:26:60.16:0,60,1795	1/1:31,5:36:75.08:2114,75,0	1/1:28,0:28:33.04:460,33,0	0/0:35,0:35:66.18:0,66,1978	0/0:29,0:29:48.15:0,48,1521	0/0:35,0:35:66.18:0,66,1835	1/1:11,18:33:15.05:639,15,0	0/0:23,0:23:36.11:0,36,1061	0/0:25,0:25:42.46:0,42,1248	0/0:19,0:19:36.09:0,36,922	0/0:23,0:23:21.06:0,21,623	0/0:29,0:29:69.22:0,69,1880	0/0:26,0:26:57.15:0,57,1654	0/0:30,0:30:66.12:0,66,1993	1/1:25,0:31:35.92:555,36,0	1/1:21,0:25:8.58:88,9,0	0/0:18,0:18:36.11:0,36,969	0/1:21,0:21:83.75:84,0,1081	0/0:33,0:33:78.23:0,78,2398	0/0:12,0:12:15.05:0,15,492
chr10	8782677	.	TA	T	8786.37	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=9.496;DP=718;FS=3.805;HRun=2;HaplotypeScore=76.8786;InbreedingCoeff=0.9996;MQ=82.38;MQ0=0;MQRankSum=-2.012;QD=33.03;ReadPosRankSum=4.283;VQSLOD=4.9390;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,41:41:99:1438,111,0	1/1:0,10:10:27.09:350,27,0	0/0:19,0:19:36.41:0,36,706	0/0:20,0:20:52.98:0,53,703	1/1:1,33:34:99:1262,99,0	1/1:0,30:30:84.27:1089,84,0	1/1:1,19:20:45.15:584,45,0	0/0:36,0:35:99:0,108,1501	0/0:28,0:28:84.28:0,84,1243	0/0:23,0:23:69.22:0,69,991	0/0:26,0:26:75.23:0,75,1068	0/0:26,0:26:78.22:0,78,1095	0/0:27,0:27:81.25:0,81,1160	0/0:21,0:21:60.20:0,60,887	0/0:34,0:34:99:0,102,1508	1/1:0,35:35:81.26:1050,81,0	1/1:0,42:42:99:1361,105,0	1/1:0,21:21:57.19:739,57,0	0/0:13,0:13:39.13:0,39,575	0/0:24,0:24:72.24:0,72,1064	0/0:26,0:26:78.26:0,78,1153	0/0:20,0:20:60.19:0,60,868	0/0:16,0:16:48.15:0,48,689	0/0:24,0:24:72.22:0,72,1025	1/1:3,30:33:72.19:914,72,0	0/0:29,0:29:84.26:0,84,1206	0/0:31,0:30:93.27:0,93,1310	0/0:9,0:9:27.07:0,27,379
chr10	8783100	.	CA	C	5702.85	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=3.898;DP=385;FS=38.398;HRun=2;HaplotypeScore=161.9141;InbreedingCoeff=0.7215;MQ=78.46;MQ0=0;MQRankSum=-7.590;QD=16.11;ReadPosRankSum=4.024;VQSLOD=2.3782;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,26:28:41.88:334,42,0	1/1:0,3:3:6:56,6,0	0/0:14,0:14:37.66:0,38,426	0/0:16,1:17:17.85:0,18,324	1/1:2,10:12:5.28:41,5,0	1/1:4,12:16:26.92:209,27,0	1/1:2,12:14:20.91:157,21,0	1/1:3,14:17:45.11:489,45,0	1/1:3,12:15:29.86:226,30,0	1/1:4,25:29:78.15:804,78,0	1/1:3,14:17:23.73:162,24,0	1/1:3,15:18:38.86:323,39,0	1/1:3,12:15:32.91:276,33,0	1/1:3,8:11:14.24:108,14,0	1/1:11,13:24:32.82:242,33,0	1/1:2,8:10:17.97:145,18,0	1/1:1,5:6:9.01:91,9,0	1/1:2,8:10:21.03:212,21,0	1/1:1,6:7:21.06:239,21,0	1/1:1,5:6:2.99:24,3,0	1/1:0,13:13:20.95:181,21,0	1/1:1,12:13:23.82:172,24,0	1/1:2,9:11:14.18:98,14,0	1/1:1,8:9:5.94:41,6,0	1/1:3,16:19:38.88:304,39,0	1/1:1,13:14:42.06:412,42,0	1/1:1,12:13:29.97:271,30,0	1/1:0,3:3:9.01:83,9,0
chr10	8783105	.	G	GT	7557.23	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=2.425;DP=372;FS=33.977;HRun=0;HaplotypeScore=175.1118;InbreedingCoeff=0.7212;MQ=76.86;MQ0=0;MQRankSum=-7.776;QD=22.03;ReadPosRankSum=3.830;VQSLOD=2.5808;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,26:29:45.10:490,45,0	1/1:0,3:3:6.02:74,6,0	0/0:14,0:14:40.44:0,40,366	0/0:15,0:15:29.76:0,30,248	1/1:2,10:12:5.66:60,6,0	1/1:4,12:16:29.11:295,29,0	1/1:1,12:13:11.41:208,11,0	1/1:6,15:21:48.26:636,48,0	1/1:2,12:14:30.07:315,30,0	1/1:4,26:30:78.25:1047,78,0	1/1:3,15:18:24.02:233,24,0	1/1:2,16:18:40.66:382,41,0	1/1:1,11:12:33.09:375,33,0	1/1:3,7:10:17.27:163,17,0	1/1:6,13:19:35.67:350,36,0	1/1:2,8:10:18.05:199,18,0	1/1:0,5:5:8.97:90,9,0	1/1:1,8:9:21.07:276,21,0	1/1:1,5:6:18.06:256,18,0	1/1:1,5:6:3:33,3,0	1/1:1,12:13:22.31:247,22,0	1/1:3,11:14:24.47:247,24,0	1/1:0,10:10:14.66:143,15,0	1/1:0,8:8:6.01:58,6,0	1/1:2,16:18:37.81:418,38,0	1/1:1,13:14:42.13:536,42,0	1/1:0,11:11:27.07:314,27,0	1/1:0,3:3:9.03:111,9,0
chr10	8787366	.	TACACACACACACACAC	T	7822.61	PASS	AB=0.714;AC=19;AF=0.339;AN=56;BaseQRankSum=5.536;DP=725;FS=4.640;HRun=0;HaplotypeScore=307.7166;InbreedingCoeff=0.8640;MQ=65.13;MQ0=7;MQRankSum=-10.431;QD=36.38;ReadPosRankSum=3.136;VQSLOD=3.5001;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:11,21:32:21.07:876,21,0	1/1:3,11:14:2.10:857,2,0	0/0:28,0:15:15.05:0,15,606	0/0:30,0:22:18.06:0,18,577	1/1:6,19:25:36.12:1194,36,0	1/1:1,13:14:27.09:1107,27,0	1/1:5,15:20:11.91:260,12,0	0/0:35,0:40:45.15:0,45,1925	0/0:20,0:28:33.11:0,33,1846	0/0:13,0:28:66.23:0,66,2625	0/0:6,0:16:12.02:0,12,371	0/0:16,0:35:60.20:0,60,2996	0/0:12,0:30:60.21:0,60,3020	0/0:10,0:30:66.23:0,66,3290	0/0:17,0:37:69.24:0,69,2726	1/1:5,18:23:30.10:1302,30,0	1/1:8,19:29:21.07:775,21,0	1/1:4,7:11:9.03:401,9,0	0/0:13,0:16:27.09:0,27,1082	0/0:11,0:30:66.23:0,66,3318	0/0:31,0:43:96.31:0,96,4713	0/0:12,0:26:45.03:0,45,1974	0/0:10,0:25:47.79:0,48,1821	0/0:15,0:33:54.18:0,54,1877	1/1:6,11:17:24.08:993,24,0	0/1:18,0:30:57.55:58,0,2508	0/0:11,0:19:27.09:0,27,1301	0/0:9,0:11:27.09:0,27,1251
chr10	8788398	.	ATGTGTGTGTGTGTGTGTGTGTGTGTG	A	4602.81	PASS	AB=0.704;AC=9;AF=0.161;AN=56;BaseQRankSum=7.501;DP=564;FS=6.348;HRun=0;HaplotypeScore=344.2022;InbreedingCoeff=0.7931;MQ=62.62;MQ0=7;MQRankSum=-7.354;QD=43.02;ReadPosRankSum=0.697;VQSLOD=2.3868;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:36:57.20:0,57,4039	0/0:9,0:11:18.06:0,18,1200	0/0:27,0:18:15.05:0,15,344	0/0:20,0:17:9.03:0,9,307	0/0:22,0:24:39.11:0,39,2414	0/0:17,0:19:27.09:0,27,1716	0/0:10,0:13:23.95:0,24,1222	0/0:23,0:22:30.09:0,30,1509	0/0:10,0:17:27.09:0,27,1523	1/1:22,6:28:18.06:1213,18,0	1/1:11,8:19:15.05:754,15,0	0/0:8,0:15:24.07:0,24,1584	0/0:10,0:12:18.95:0,19,1009	0/0:16,0:20:30.10:0,30,1952	1/1:15,8:23:21.07:1398,21,0	0/1:11,0:19:99:142,0,3040	0/0:17,0:24:33.11:0,33,2356	0/0:17,0:23:46.97:0,47,3199	0/0:15,0:14:9:0,9,499	0/0:17,0:18:21.07:0,21,1158	0/0:30,0:30:48.16:0,48,2585	0/0:14,0:19:36.12:0,36,2528	1/1:11,7:18:21.07:1095,21,0	0/0:12,1:13:0.47:0,0,1	0/0:22,0:22:51.17:0,51,3706	0/0:15,0:15:33.11:0,33,1881	0/0:23,0:25:39.13:0,39,2689	0/0:9,0:11:18.53:0,19,1092
chr10	8789385	.	T	TATCTTGTGTGACTCAT	1194.59	PASS	AB=0.667;AC=17;AF=0.944;AN=18;BaseQRankSum=-1.736;DP=21;FS=4.472;HRun=0;HaplotypeScore=17.4899;MQ=140.59;MQ0=0;MQRankSum=-0.744;QD=74.66;ReadPosRankSum=-0.496;VQSLOD=2.0920;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	./.	1/1:0,1:4:12.04:674,12,0	0/1:1,0:2:22.45:227,0,22	./.	./.	./.	1/1:1,0:1:3.01:49,3,0	./.	1/1:1,0:1:3:25,3,0	./.	1/1:2,0:2:3.01:90,3,0	./.	./.	1/1:2,0:2:6.01:73,6,0	./.	./.	./.	./.	./.	1/1:1,0:1:3.01:59,3,0	1/1:2,0:2:3.01:49,3,0	./.	./.	./.	1/1:1,0:1:3:25,3,0	./.	./.
chr10	8790889	.	AT	A	8055.57	PASS	AB=1.000;AC=35;AF=0.625;AN=56;BaseQRankSum=11.642;DP=508;FS=6.782;HRun=7;HaplotypeScore=53.3777;InbreedingCoeff=0.9560;MQ=85.15;MQ0=0;MQRankSum=-0.711;QD=25.10;ReadPosRankSum=1.053;VQSLOD=5.3471;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:60.19:0,60,755	0/0:10,0:10:30.10:0,30,377	0/0:17,0:17:44.88:0,45,495	0/1:19,0:19:0.90:1,0,243	0/0:32,0:32:93.27:0,93,1136	0/0:23,0:23:66.19:0,66,816	0/0:13,0:13:30.08:0,30,363	1/1:2,33:35:99:1002,99,0	1/1:1,12:13:36.08:367,36,0	1/1:2,25:27:75.15:757,75,0	1/1:3,24:27:72.16:735,72,0	1/1:2,8:10:24.05:245,24,0	1/1:0,12:12:30.07:306,30,0	1/1:4,15:19:42.09:428,42,0	1/1:1,21:22:60.13:611,60,0	0/0:16,0:16:48.15:0,48,604	0/0:21,0:21:63.19:0,63,779	0/0:10,0:10:21.03:0,21,247	1/1:3,8:11:24.05:245,24,0	1/1:2,23:25:66.15:673,66,0	1/1:1,10:11:27.06:275,27,0	1/1:3,14:17:39.09:397,39,0	1/1:1,17:18:48.11:489,48,0	1/1:1,11:12:27.06:275,27,0	0/0:23,0:23:66.20:0,66,818	1/1:1,17:18:51.10:514,51,0	1/1:0,17:17:51.12:520,51,0	1/1:0,8:8:21.05:214,21,0
chr10	8791003	.	C	CT	2878.71	PASS	AB=0.950;AC=24;AF=0.429;AN=56;BaseQRankSum=-7.789;DP=487;FS=0.000;HRun=12;HaplotypeScore=61.2616;InbreedingCoeff=0.7577;MQ=73.27;MQ0=0;MQRankSum=0.578;QD=12.85;ReadPosRankSum=-2.147;VQSLOD=2.9395;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:56.59:0,57,410	0/0:9,0:9:20.82:0,21,153	0/1:20,0:14:1.64:2,0,69	0/0:8,0:8:4.70:0,5,40	0/0:31,0:33:81.06:0,81,561	0/0:23,0:24:49.63:0,50,350	0/0:7,0:7:17.89:0,18,131	1/1:14,29:43:42.07:683,42,0	0/1:8,1:9:5.32:5,0,129	0/0:19,0:19:38.74:0,39,283	0/0:26,0:26:62.55:0,63,455	1/1:3,9:12:5.55:185,6,0	1/1:3,11:14:24.04:233,24,0	1/1:4,9:13:2.34:181,2,0	0/0:19,0:19:47.71:0,48,350	0/0:23,0:23:53.64:0,54,394	0/0:22,0:23:61.54:0,62,430	0/0:8,0:8:17.88:0,18,131	1/1:11,7:21:44.18:342,44,0	1/1:7,19:26:50.86:454,51,0	1/1:3,4:7:3:29,3,0	1/1:2,14:16:33.05:321,33,0	0/0:15,0:17:36.80:0,37,250	0/0:4,0:4:5.96:0,6,44	0/0:17,0:17:38.71:0,39,282	1/1:8,14:22:1.28:324,1,0	1/1:2,11:13:18.03:175,18,0	1/1:3,5:8:15.02:146,15,0
chr10	8791042	.	AT	A	2890.49	PASS	AB=0.917;AC=11;AF=0.196;AN=56;BaseQRankSum=13.172;DP=481;FS=1.427;HRun=3;HaplotypeScore=65.7458;InbreedingCoeff=0.8786;MQ=80.54;MQ0=0;MQRankSum=-4.936;QD=26.52;ReadPosRankSum=-0.946;VQSLOD=2.5424;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:60.18:0,60,843	0/0:12,0:12:36.12:0,36,518	0/0:15,0:15:36.10:0,36,469	0/0:11,0:11:27.91:0,28,323	0/0:37,0:37:99:0,108,1515	0/0:25,0:25:75.16:0,75,1016	0/0:12,0:12:36.12:0,36,518	0/0:27,0:26:75.22:0,75,1016	0/0:13,0:13:39.12:0,39,543	1/1:1,17:18:54.16:648,54,0	1/1:5,16:21:60.13:694,60,0	0/0:15,0:15:45.13:0,45,628	0/0:17,0:17:51.17:0,51,734	0/0:15,0:15:42.14:0,42,604	1/1:2,23:25:75.22:913,75,0	0/0:20,0:20:60.20:0,60,864	0/0:24,0:24:69.19:0,69,952	0/0:12,0:12:36.10:0,36,488	0/0:18,0:18:54.06:0,54,719	0/0:20,0:20:60.19:0,60,847	0/0:4,0:4:9.01:0,9,110	0/0:13,0:13:39.12:0,39,545	1/1:1,17:18:51.14:616,51,0	1/1:0,5:5:15.05:185,15,0	0/0:20,0:20:60.15:0,60,805	0/1:20,2:22:10.82:11,0,757	0/0:11,0:11:24.06:0,24,326	0/0:9,0:9:27.09:0,27,386
chr10	8791048	.	AC	A	3230.05	PASS	AB=0.920;AC=11;AF=0.196;AN=56;BaseQRankSum=13.435;DP=481;FS=0.436;HRun=1;HaplotypeScore=63.1151;InbreedingCoeff=0.8762;MQ=80.66;MQ0=0;MQRankSum=-3.830;QD=28.84;ReadPosRankSum=-0.331;VQSLOD=3.1995;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:63.19:0,63,960	0/0:11,0:11:33.11:0,33,527	0/0:15,0:15:41.93:0,42,623	0/0:10,0:10:27.02:0,27,397	0/0:35,0:35:99:0,105,1657	0/0:22,0:22:63.21:0,63,1004	0/0:12,0:12:36.12:0,36,572	0/0:30,0:29:90.29:0,90,1412	0/0:14,0:14:42.13:0,42,640	1/1:1,17:18:51.16:686,51,0	1/1:2,21:23:60.19:809,60,0	0/0:16,0:16:48.13:0,48,737	0/0:18,0:18:54.18:0,54,862	0/0:15,0:15:42.12:0,42,645	1/1:0,23:23:69.19:939,69,0	0/0:19,0:19:57.19:0,57,911	0/0:23,0:23:69.24:0,69,1100	0/0:12,0:12:36.12:0,36,575	0/0:20,0:20:57.16:0,57,852	0/0:21,0:21:63.15:0,63,976	0/0:4,0:4:9.03:0,9,144	0/0:14,0:14:42.14:0,42,665	1/1:0,19:19:54.09:709,54,0	1/1:1,5:6:18.06:250,18,0	0/0:18,0:18:54.18:0,54,862	0/1:21,2:23:14.26:14,0,937	0/0:10,0:10:24.08:0,24,371	0/0:9,0:9:27.09:0,27,431
chr10	8792878	.	TTGTGTGTGTGTGTGTGTG	T	1811.15	PASS	AB=0.865;AC=16;AF=0.308;AN=52;BaseQRankSum=5.888;DP=543;FS=29.298;HRun=0;HaplotypeScore=249.5642;InbreedingCoeff=0.4159;MQ=68.54;MQ0=19;MQRankSum=-4.753;QD=10.12;ReadPosRankSum=-1.839;VQSLOD=0.6476;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:37,1:36:18.87:19,0,39	1/1:4,5:9:9.03:434,9,0	./.	./.	0/0:17,0:20:18.01:0,18,208	0/1:14,1:22:95.58:295,0,96	1/1:11,0:11:2.94:18,3,0	0/0:24,0:23:21.04:0,21,456	0/0:17,0:23:4.93:0,5,242	0/0:17,0:19:24.08:0,24,675	0/0:9,0:9:9.03:0,9,290	0/0:18,0:17:27.09:0,27,669	0/0:21,0:22:20.74:0,21,400	0/0:21,0:21:18.70:0,19,502	0/0:13,0:21:21.07:0,21,797	1/1:16,8:24:15.05:724,15,0	0/1:19,0:20:79.10:266,0,79	1/1:14,0:14:1.50:35,1,0	1/1:10,0:9:2.22:7,2,0	0/0:16,0:22:12.80:0,13,375	0/0:18,0:18:12.04:0,12,284	0/0:17,0:19:21.07:0,21,480	0/0:16,0:15:15.05:0,15,511	0/0:19,0:18:24.08:0,24,859	1/1:8,6:15:3:145,3,0	0/0:24,0:24:17.09:0,17,266	0/1:12,0:16:27.31:27,0,410	0/0:12,0:11:11.31:0,11,175
chr10	8796157	.	T	TTATA	2159.77	PASS	AB=1.000;AC=33;AF=0.660;AN=50;BaseQRankSum=-0.165;DP=161;FS=2.507;HRun=0;HaplotypeScore=35.3032;InbreedingCoeff=0.4837;MQ=92.18;MQ0=2;MQRankSum=-1.204;QD=19.63;ReadPosRankSum=0.887;VQSLOD=3.1505;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,2:2:3.01:75,3,0	1/1:1,0:1:3:25,3,0	0/0:13,0:10:0.41:0,0,2	0/0:21,0:9:6.26:0,6,76	./.	1/1:2,7:10:18.06:447,18,0	1/1:2,0:2:3.01:50,3,0	1/1:32,0:32:69.74:461,70,0	0/0:5,0:5:12.04:0,12,200	0/0:3,0:2:6:0,6,53	0/0:1,0:1:3.01:0,3,46	1/1:4,0:4:2.80:13,3,0	1/1:2,0:2:2.80:13,3,0	1/1:4,0:4:5.06:21,5,0	0/0:2,0:2:3.01:0,3,47	0/1:1,0:1:0:0,0,0	1/1:5,7:13:2.81:371,3,0	1/1:3,9:13:15.05:377,15,0	1/1:3,0:3:3:26,3,0	./.	./.	1/1:1,0:1:2.22:7,2,0	0/0:1,0:1:2.98:0,3,22	0/0:1,0:1:3:0,3,25	1/1:2,4:6:12.04:302,12,0	1/1:6,0:6:8.23:43,8,0	1/1:7,0:7:7.75:46,8,0	1/1:2,0:2:5.60:26,6,0
chr10	8796173	.	A	AT	1365.25	PASS	AC=22;AF=0.423;AN=52;BaseQRankSum=-1.520;DP=156;FS=5.478;HRun=1;HaplotypeScore=30.1125;InbreedingCoeff=0.5717;MQ=78.49;MQ0=3;MQRankSum=-2.948;QD=21.67;ReadPosRankSum=-0.260;VQSLOD=3.2943;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:4:5.88:0,6,54	0/0:2,0:2:3.01:0,3,39	0/0:9,0:6:6.71:0,7,89	0/0:20,0:7:11.76:0,12,113	0/0:2,0:2:3.01:0,3,39	0/0:10,0:10:20.84:0,21,170	0/0:1,0:1:2.96:0,3,19	1/1:4,26:25:66:884,66,0	0/0:5,0:5:12.02:0,12,141	0/0:3,0:2:2.46:0,2,19	0/0:1,0:1:3.01:0,3,38	1/1:0,2:2:3.01:45,3,0	1/1:1,1:6:3.01:45,3,0	1/1:0,2:2:6.02:90,6,0	0/0:1,0:1:3.01:0,3,38	0/0:2,0:2:3.01:0,3,39	0/0:13,0:13:26.27:0,26,244	0/0:13,0:13:23.82:0,24,204	1/1:0,0:2:5.98:64,6,0	1/1:2,0:2:3.01:30,3,0	./.	1/1:0,1:1:3.01:45,3,0	1/1:1,0:1:0.47:1,0,0	./.	0/0:4,0:4:11.87:0,12,87	1/1:1,3:4:6:90,6,0	1/1:0,4:4:9.03:126,9,0	1/1:2,7:9:8.99:110,9,0
chr10	8796247	.	AAGGG	A	100.31	PASS	AB=0.952;AC=8;AF=0.143;AN=56;BaseQRankSum=4.383;DP=338;FS=5.013;HRun=0;HaplotypeScore=83.0262;InbreedingCoeff=-0.0581;MQ=66.27;MQ0=9;MQRankSum=-2.148;QD=1.52;ReadPosRankSum=-3.898;VQSLOD=0.0523;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:13,1:13:27.80:28,0,253	0/0:8,0:8:16.92:0,17,167	0/0:30,0:17:28.21:0,28,603	0/0:52,0:22:24.07:0,24,720	0/0:13,0:13:23.27:0,23,533	0/0:12,0:12:27.54:0,28,215	0/0:7,0:7:14.18:0,14,173	0/0:21,0:19:0.46:0,0,1114	0/0:10,0:10:18.21:0,18,504	0/0:15,0:14:19.16:0,19,943	0/0:10,0:10:26.92:0,27,497	1/1:6,1:7:0.75:3,1,0	0/0:12,0:13:10.88:0,11,583	0/1:3,0:3:1.80:2,0,59	0/0:7,0:7:6.02:0,6,141	0/0:5,0:5:11.16:0,11,116	0/0:9,0:9:18.06:0,18,405	0/1:10,2:14:99:128,0,321	0/0:5,0:5:12.04:0,12,335	0/1:11,0:11:18.79:19,0,632	0/1:8,0:8:25.55:26,0,264	0/0:7,0:7:15.01:0,15,312	0/1:9,0:9:11.81:12,0,252	0/0:13,1:14:7.06:0,7,179	0/0:15,0:15:9.04:0,9,55	0/0:4,0:5:11.62:0,12,333	0/0:5,0:5:10.28:0,10,221	0/0:6,0:6:6.02:0,6,119
chr10	8796249	.	G	GGGGAGA	4741.60	PASS	AB=1.000;AC=36;AF=0.667;AN=54;BaseQRankSum=-5.993;DP=364;FS=4.988;HRun=0;HaplotypeScore=84.7051;InbreedingCoeff=0.5769;MQ=66.35;MQ0=9;MQRankSum=0.512;QD=23.95;ReadPosRankSum=-2.376;VQSLOD=3.6669;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,0:13:5.60:18,6,0	0/0:1,0:8:14.63:0,15,167	0/0:32,0:18:7.20:0,7,125	0/0:60,0:25:1.59:0,2,126	0/0:7,0:13:3.01:0,3,32	0/0:2,0:13:24.07:0,24,316	0/0:1,0:7:9.03:0,9,119	1/1:24,0:22:33.04:554,33,0	1/1:4,7:12:18.06:551,18,0	1/1:8,7:17:24.07:591,24,0	./.	1/1:1,6:7:3.48:100,3,0	1/1:10,3:13:27.08:659,27,0	1/1:0,3:3:9.03:296,9,0	1/1:1,6:8:3.01:99,3,0	0/0:1,0:5:9.03:0,9,125	0/1:8,0:9:0.01:0,0,0	0/1:11,0:14:13.56:14,0,79	1/1:5,0:5:3.01:61,3,0	1/1:9,2:11:15.05:336,15,0	1/1:9,0:9:15.05:375,15,0	1/1:2,5:8:2.71:99,3,0	1/1:3,6:9:3.01:81,3,0	1/1:3,11:15:15.05:436,15,0	0/0:0,0:16:9.01:0,9,185	1/1:5,0:5:5.98:74,6,0	1/1:0,5:7:11.90:356,12,0	1/1:7,0:7:3.01:43,3,0
chr10	8796423	.	C	CGAGAGAGAGAGAGAGAGA	12338.42	PASS	AB=1.000;AC=47;AF=0.904;AN=52;BaseQRankSum=-3.142;DP=617;FS=18.182;HRun=0;HaplotypeScore=286.7123;InbreedingCoeff=0.4643;MQ=70.18;MQ0=8;MQRankSum=-2.680;QD=25.08;ReadPosRankSum=2.218;VQSLOD=1.8895;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:13:6.02:263,6,0	1/1:3,0:3:3.01:47,3,0	0/0:31,0:15:3:0,3,46	0/0:66,0:42:14.28:0,14,348	1/1:13,0:13:6:146,6,0	1/1:19,0:18:9.03:268,9,0	1/1:25,0:24:15.97:461,16,0	1/1:47,0:45:49.34:830,49,0	1/1:17,13:30:6.02:322,6,0	1/1:10,7:17:32.31:1256,32,0	./.	1/1:19,0:18:17.27:679,17,0	1/1:31,0:31:21.07:651,21,0	1/1:26,0:26:15.03:553,15,0	1/1:30,0:28:6.01:126,6,0	1/1:27,0:26:12.03:542,12,0	1/1:9,0:9:6.48:45,6,0	1/1:11,0:11:15.03:487,15,0	1/1:27,0:27:46.86:1561,47,0	1/1:12,0:12:12.04:491,12,0	1/1:17,0:17:6.02:120,6,0	./.	1/1:17,0:17:3:25,3,0	1/1:19,0:17:2.24:47,2,0	0/1:21,0:21:0:0,0,0	1/1:23,0:22:45.15:1832,45,0	1/1:27,0:27:42.12:1311,42,0	1/1:5,0:5:12.04:276,12,0
chr10	8796833	.	AGCG	A	11283.29	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=16.718;DP=633;FS=16.951;HRun=0;HaplotypeScore=115.1123;InbreedingCoeff=0.9716;MQ=84.18;MQ0=0;MQRankSum=-5.980;QD=41.03;ReadPosRankSum=1.025;VQSLOD=4.9138;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,129,2919	1/1:0,1:1:3.01:50,3,0	0/0:16,0:16:38.96:0,39,702	0/0:28,0:28:63.87:0,64,1435	0/0:25,0:25:75.26:0,75,1663	0/0:19,0:19:57.18:0,57,1227	0/0:24,0:24:66.22:0,66,1433	1/1:5,29:34:84.29:1389,84,0	0/0:29,0:29:84.29:0,84,1902	0/0:28,0:28:84.29:0,84,1899	0/0:11,0:11:33.11:0,33,703	1/1:2,14:16:39.13:636,39,0	1/1:2,18:20:51.17:848,51,0	1/1:0,23:23:51.17:849,51,0	0/0:23,0:23:69.24:0,69,1541	0/0:26,0:26:78.27:0,78,1737	1/1:1,41:42:99:1649,99,0	0/0:26,0:26:72.21:0,72,1559	1/1:4,22:26:60.20:995,60,0	1/1:0,8:8:24.08:400,24,0	1/1:1,39:40:99:1748,105,0	1/1:1,7:8:15.05:250,15,0	0/0:13,0:13:39.13:0,39,881	0/0:28,0:28:72.25:0,72,1631	0/0:18,0:18:54.18:0,54,1176	1/1:5,27:32:19.36:1321,19,0	1/1:0,19:19:51.17:848,51,0	1/1:0,6:6:18.06:300,18,0
chr10	8799107	.	T	TC	18750.50	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-15.186;DP=703;FS=1.831;HRun=3;HaplotypeScore=62.6372;InbreedingCoeff=0.9967;MQ=80.21;MQ0=0;MQRankSum=-3.497;QD=35.85;ReadPosRankSum=0.531;VQSLOD=5.3925;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,26:26:75.25:1050,75,0	1/1:2,10:12:24:294,24,0	0/0:25,0:25:72.12:0,72,822	0/0:9,0:9:23.67:0,24,210	1/1:1,33:35:99:1331,99,0	1/1:1,27:28:81.27:1134,81,0	1/1:2,21:23:54.18:756,54,0	1/1:3,33:36:99:1311,99,0	0/0:18,0:18:54.17:0,54,648	0/0:33,0:32:93.25:0,93,1101	0/0:26,0:26:78.24:0,78,936	1/1:0,24:24:63.21:882,63,0	1/1:2,23:25:69.23:966,69,0	1/1:2,22:24:60.20:840,60,0	0/0:25,0:25:75.23:0,75,900	1/1:0,18:18:45.15:630,45,0	1/1:4,16:20:45.15:630,45,0	1/1:2,23:25:65.89:891,66,0	1/1:1,19:20:57.18:781,57,0	1/1:0,34:34:96.22:1294,96,0	1/1:3,14:17:42.14:588,42,0	1/1:0,23:23:66.22:923,66,0	0/0:25,0:25:69.21:0,69,828	0/0:19,0:19:54.13:0,54,623	1/1:6,37:43:96.32:1344,96,0	1/1:2,28:30:15.28:1062,15,0	1/1:0,42:42:99:1638,117,0	1/1:6,12:18:30.09:405,30,0
chr10	8800101	.	A	AT	378.33	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-5.205;DP=552;FS=9.096;HRun=8;HaplotypeScore=89.1676;InbreedingCoeff=0.7504;MQ=72.91;MQ0=0;MQRankSum=-0.349;QD=25.22;ReadPosRankSum=0.186;VQSLOD=3.7575;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:48:0,48,433	0/0:10,0:10:21.01:0,21,192	0/0:15,0:15:0.04:0,0,203	0/0:9,0:8:9:0,9,81	0/0:29,0:29:81.01:0,81,732	0/0:22,0:22:63.02:0,63,571	0/0:15,0:15:42.02:0,42,384	0/0:39,0:39:99:0,102,929	1/1:1,14:15:42.10:473,42,0	0/0:27,0:27:75.04:0,75,686	0/0:23,0:23:57.02:0,57,522	0/0:12,0:12:33.01:0,33,302	0/0:18,0:18:51.03:0,51,467	0/0:22,0:22:60.01:0,60,539	0/0:23,0:23:57.03:0,57,522	0/0:28,0:28:75.01:0,75,677	0/0:18,0:18:51.03:0,51,467	0/0:12,0:12:36.01:0,36,326	0/0:26,0:26:72.02:0,72,654	0/0:27,0:27:78:0,78,703	0/0:19,0:21:55.10:0,55,479	0/0:13,0:13:27.01:0,27,247	0/0:18,0:18:51.03:0,51,467	0/0:25,0:25:66.03:0,66,604	0/0:19,0:19:56.99:0,57,513	0/0:22,0:22:57.03:0,57,522	0/0:19,0:19:54.03:0,54,494	0/0:9,0:9:23.99:0,24,214
chr10	8801187	.	TGTA	T	23435.41	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=14.835;DP=791;FS=2.050;HRun=0;HaplotypeScore=121.6814;InbreedingCoeff=0.9948;MQ=87.44;MQ0=0;MQRankSum=-8.344;QD=41.48;ReadPosRankSum=3.616;VQSLOD=6.3507;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,47:47:99:1847,111,0	1/1:1,14:15:42.10:683,42,0	0/0:35,0:35:99:0,99,2186	0/0:26,0:26:72.05:0,72,1444	1/1:1,27:28:60.14:989,60,0	1/1:1,28:29:63.22:1074,63,0	1/1:1,33:34:66.16:1091,66,0	1/1:3,30:33:90.23:1351,90,0	0/0:29,0:29:84.29:0,84,1935	0/0:39,0:39:99:0,117,2620	0/0:22,0:22:62.87:0,63,1428	1/1:0,20:20:51.17:869,51,0	1/1:1,31:32:90.31:1532,90,0	1/1:3,31:34:75.26:1277,75,0	0/0:24,0:24:72.25:0,72,1635	1/1:1,37:38:74.34:1594,74,0	1/1:0,23:23:69.24:1176,69,0	1/1:1,17:18:45.11:736,45,0	1/1:0,30:30:90.30:1501,90,0	1/1:0,29:29:84.10:1294,84,0	1/1:1,27:28:63.09:979,63,0	1/1:1,26:27:72.16:1164,72,0	0/0:19,0:19:57.19:0,57,1250	0/0:32,0:32:90.30:0,90,1988	1/1:1,30:31:81.23:1349,81,0	1/1:2,34:36:33.14:1615,33,0	1/1:1,25:26:69.13:1140,69,0	1/1:0,7:7:12:173,12,0
chr10	8802851	.	AAG	A	3088.20	PASS	AB=0.976;AC=30;AF=0.536;AN=56;BaseQRankSum=6.926;DP=660;FS=2.032;HRun=0;HaplotypeScore=168.3344;InbreedingCoeff=0.7222;MQ=66.56;MQ0=0;MQRankSum=-2.583;QD=7.94;ReadPosRankSum=-3.369;VQSLOD=3.0198;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:26,1:27:9.09:9,0,301	1/1:15,1:16:39.95:182,40,0	0/0:11,0:10:30.08:0,30,456	0/0:9,0:9:26.94:0,27,386	0/0:39,0:39:44.26:0,44,539	0/0:24,0:24:64.27:0,64,412	0/1:15,1:16:63.75:64,0,113	1/1:30,1:31:72.50:316,73,0	0/0:27,0:27:81.26:0,81,1395	0/0:38,0:38:99:0,111,1932	0/0:20,0:20:60.21:0,60,1056	1/1:33,1:34:79.93:343,80,0	1/1:31,3:34:86.61:450,87,0	1/1:17,0:17:42.56:178,43,0	0/0:25,0:25:75.24:0,75,1282	0/0:22,0:22:48.09:0,48,345	1/1:19,1:20:48.88:217,49,0	0/1:20,0:20:31.44:31,0,182	1/1:9,3:12:26.35:159,26,0	1/1:34,0:34:77.57:295,78,0	1/1:6,0:6:11.03:59,11,0	1/1:24,0:24:58.65:231,59,0	0/0:30,0:30:90.31:0,90,1584	0/0:26,0:26:69.24:0,69,1216	0/1:31,0:31:9.63:10,0,330	1/1:31,1:32:68.74:338,69,0	1/1:25,1:26:65.98:299,66,0	1/1:9,0:9:23.60:128,24,0
chr10	8802852	.	AG	A	11533.41	PASS	AB=0.985;AC=32;AF=0.571;AN=56;BaseQRankSum=-6.806;DP=658;FS=0.286;HRun=1;HaplotypeScore=126.5409;InbreedingCoeff=0.5794;MQ=66.55;MQ0=0;MQRankSum=-7.593;QD=25.86;ReadPosRankSum=-4.396;VQSLOD=3.4039;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:25,1:26:50.61:109,0,51	1/1:5,11:16:48.11:611,48,0	0/0:11,0:10:30.08:0,30,380	0/0:9,0:9:26.94:0,27,325	0/1:35,2:37:99:108,0,112	0/0:24,0:24:16.67:0,17,87	0/1:16,0:16:3.59:118,0,4	1/1:9,22:31:87.24:1135,87,0	0/0:27,0:27:81.25:0,81,1112	0/0:40,0:40:99:0,117,1591	0/0:20,0:20:60.20:0,60,833	1/1:6,28:34:99:1319,102,0	1/1:6,28:34:99:1286,102,0	1/1:2,15:17:51.14:675,51,0	0/0:25,0:25:75.22:0,75,1013	0/1:22,0:22:25.35:25,0,71	1/1:2,18:20:57.04:712,57,0	0/1:20,0:20:31.88:83,0,32	1/1:4,7:11:30.04:365,30,0	1/1:4,30:34:96.74:1285,97,0	1/1:1,5:6:14.92:143,15,0	1/1:2,22:24:72.09:941,72,0	0/0:30,0:30:90.30:0,90,1255	0/0:26,0:26:69.23:0,69,962	0/1:31,0:31:39.83:84,0,40	1/1:8,24:32:91.49:1166,91,0	1/1:3,23:26:78.21:1039,78,0	1/1:3,6:9:27.06:327,27,0
chr10	8802891	.	G	GA	21083.54	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-2.963;DP=688;FS=1.638;HRun=6;HaplotypeScore=100.1780;InbreedingCoeff=0.9712;MQ=74.71;MQ0=0;MQRankSum=-8.453;QD=32.24;ReadPosRankSum=5.356;VQSLOD=4.1001;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,28:31:78.25:977,78,0	1/1:2,14:16:39.09:473,39,0	0/0:20,1:21:11.08:0,11,417	0/0:13,0:13:29.98:0,30,283	1/1:1,30:31:84.18:1021,84,0	1/1:0,25:25:72.23:906,72,0	1/1:3,13:16:36.12:453,36,0	1/1:8,35:43:99:1270,102,0	1/1:3,24:27:72.23:904,72,0	1/1:6,30:36:93.30:1166,93,0	1/1:5,15:20:45.10:544,45,0	1/1:7,22:29:75.22:917,75,0	1/1:2,36:38:99:1368,111,0	1/1:3,17:20:57.17:704,57,0	1/1:2,26:28:78.25:981,78,0	1/1:3,12:15:30.10:377,30,0	1/1:2,22:24:72.23:905,72,0	1/1:1,19:20:51.16:639,51,0	1/1:1,15:16:45.14:564,45,0	1/1:9,30:39:96.28:1171,96,0	1/1:0,13:13:30.09:369,30,0	1/1:2,22:24:69.22:858,69,0	1/1:3,25:28:80.29:984,80,0	1/1:2,24:26:66.21:830,66,0	1/1:4,21:25:57.18:717,57,0	1/1:3,29:32:90.28:1116,90,0	1/1:7,18:25:54.17:679,54,0	1/1:2,5:7:15.05:189,15,0
chr10	8803720	.	GTATCT	G	14261.63	PASS	AB=0.511;AC=25;AF=0.446;AN=56;BaseQRankSum=16.585;DP=575;FS=1.988;HRun=0;HaplotypeScore=117.8098;InbreedingCoeff=0.9265;MQ=75.04;MQ0=0;MQRankSum=-7.839;QD=60.69;ReadPosRankSum=0.722;VQSLOD=5.8092;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,102,3326	1/1:0,8:8:21.07:489,21,0	0/0:13,0:13:26.29:0,26,887	0/0:15,0:17:38.92:0,39,978	0/0:34,0:34:99:0,102,3100	0/0:28,0:28:84.27:0,84,2720	0/0:11,0:11:33.11:0,33,1015	1/1:0,41:41:99:2750,123,0	0/0:17,0:17:51.18:0,51,1698	0/0:32,0:32:96.33:0,96,3172	0/0:25,0:25:75.26:0,75,2496	1/1:0,12:12:33.11:741,33,0	1/1:0,21:21:60.21:1397,60,0	1/1:0,12:12:33.11:766,33,0	0/0:19,0:19:54.19:0,54,1741	0/0:16,0:16:48.16:0,48,1592	1/1:0,25:25:66.23:1523,66,0	0/0:35,0:35:99:0,105,3443	1/1:0,17:17:51.17:1135,51,0	1/1:0,11:11:24.08:559,24,0	1/1:0,22:22:36.30:839,36,0	1/1:0,15:15:42.14:964,42,0	0/0:20,0:20:60.21:0,60,1945	0/0:9,0:9:27.09:0,27,900	0/0:30,0:30:90.31:0,90,2969	0/1:1,23:24:27.77:1421,0,28	1/1:0,17:17:42.14:978,42,0	1/1:0,10:10:30.10:699,30,0
chr10	8805171	.	ATT	A	2569.61	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-12.541;DP=570;FS=0.000;HRun=10;HaplotypeScore=152.3390;InbreedingCoeff=0.9660;MQ=71.74;MQ0=0;MQRankSum=1.356;QD=24.47;ReadPosRankSum=-1.302;VQSLOD=1.5785;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,107,940	0/0:6,0:6:15.01:0,15,135	0/0:9,0:8:18.49:0,18,222	0/0:17,0:17:30.94:0,31,314	0/0:30,0:30:82.57:0,83,720	0/0:30,0:30:75.02:0,75,669	0/0:22,0:22:33.02:0,33,297	0/0:15,0:15:35.67:0,36,320	0/0:22,0:23:66.21:0,66,1005	1/1:3,14:17:42.09:459,42,0	1/1:0,17:17:39.09:434,39,0	0/0:13,0:13:26.99:0,27,237	0/0:19,0:19:44.89:0,45,405	0/0:20,0:20:51.03:0,51,459	1/1:2,15:18:44.85:480,45,0	0/0:18,0:18:51.03:0,51,458	0/0:28,0:28:47.77:0,48,573	0/0:29,0:29:71.03:0,71,616	0/0:22,0:22:53.98:0,54,482	0/0:24,0:24:57:0,57,506	0/0:17,0:17:35.05:0,35,303	0/0:28,0:28:68.61:0,69,564	1/1:3,18:21:45.11:501,45,0	1/1:0,32:32:78.21:870,78,0	0/0:11,0:11:24.01:0,24,214	0/0:12,0:12:27.02:0,27,244	0/0:22,0:22:60.03:0,60,539	0/0:1,0:3:5.17:0,5,20
chr10	8805172	.	T	TTA	16891.83	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-8.097;DP=575;FS=4.544;HRun=0;HaplotypeScore=103.4231;InbreedingCoeff=0.9702;MQ=71.75;MQ0=0;MQRankSum=-3.348;QD=39.93;ReadPosRankSum=3.675;VQSLOD=6.6712;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,44:47:99:1802,108,0	1/1:0,5:5:15.05:259,15,0	0/0:9,0:8:8.87:0,9,192	0/0:17,0:17:25.18:0,25,266	1/1:0,30:30:87.11:1361,87,0	1/1:1,28:29:78.21:1316,78,0	1/1:1,21:22:33.11:570,33,0	1/1:2,14:18:44.93:596,45,0	0/0:23,0:23:68.80:0,69,967	0/0:16,0:16:39.32:0,39,347	0/0:17,0:17:35.56:0,36,304	1/1:1,13:14:26.96:430,27,0	1/1:0,20:20:45.02:777,45,0	1/1:0,20:20:51.17:879,51,0	0/0:18,0:18:50.95:0,51,423	1/1:0,19:19:51.17:882,51,0	1/1:1,26:27:69.07:1154,69,0	1/1:1,28:29:72.11:1152,72,0	1/1:2,22:25:69.02:962,69,0	1/1:3,20:23:57.19:983,57,0	1/1:0,17:17:36.11:596,36,0	1/1:1,28:29:75.10:1178,75,0	0/0:20,0:20:50.90:0,51,413	0/0:32,0:32:77.90:0,78,637	1/1:0,11:11:24.08:399,24,0	1/1:1,11:13:10.95:460,11,0	1/1:1,21:22:60.20:1036,60,0	1/1:3,0:3:9:98,9,0
chr10	8805173	.	T	TA	5807	PASS	AB=1.000;AC=39;AF=0.696;AN=56;BaseQRankSum=8.949;DP=561;FS=5.609;HRun=0;HaplotypeScore=127.9080;InbreedingCoeff=0.7397;MQ=71.95;MQ0=0;MQRankSum=-3.245;QD=13.63;ReadPosRankSum=6.137;VQSLOD=5.7437;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:45,1:46:76.82:596,77,0	1/1:6,0:6:14.61:86,15,0	0/0:9,0:8:20.99:0,21,237	0/0:17,0:17:33.60:0,34,293	1/1:30,0:30:69.17:488,69,0	1/1:27,0:27:73.19:440,73,0	1/1:20,0:20:32.17:190,32,0	1/1:17,0:17:0.37:212,0,0	0/0:23,0:23:63.76:0,64,883	0/1:16,0:16:12.55:13,0,165	0/0:17,0:17:6.79:0,7,140	1/1:13,1:14:26.41:180,26,0	1/1:20,0:20:43.74:258,44,0	1/1:21,0:21:49.70:293,50,0	0/0:18,0:18:48.10:0,48,254	1/1:19,0:19:49.72:294,50,0	1/1:25,1:26:67.37:422,67,0	1/1:27,1:28:63.78:424,64,0	1/1:22,0:22:7.90:323,8,0	1/1:20,0:20:55.65:340,56,0	1/1:18,0:18:28.47:184,28,0	1/1:29,0:29:27.55:372,28,0	0/0:19,0:19:47.87:0,48,238	0/0:32,0:32:72.75:0,73,336	1/1:11,0:11:23.48:156,23,0	0/1:13,0:13:4.90:151,0,5	1/1:20,0:20:58.57:357,59,0	0/1:3,0:3:0.27:29,0,0
chr10	8805297	.	TA	T	15634.86	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=1.144;DP=586;FS=1.354;HRun=6;HaplotypeScore=87.8399;InbreedingCoeff=0.9950;MQ=75.49;MQ0=0;MQRankSum=-6.259;QD=28.64;ReadPosRankSum=4.009;VQSLOD=5.2977;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,35:38:99:1133,108,0	1/1:0,9:9:27.07:290,27,0	0/0:8,0:8:18.48:0,18,194	0/0:14,0:14:39:0,39,433	1/1:6,9:15:30.07:321,30,0	1/1:0,29:29:78.20:838,78,0	1/1:3,27:30:78.20:838,78,0	1/1:5,16:21:48.07:503,48,0	0/0:18,0:18:51.14:0,51,642	1/1:2,24:26:72.16:760,72,0	1/1:1,17:18:48.12:516,48,0	1/1:1,18:19:48.12:516,48,0	1/1:1,25:26:72.18:774,72,0	1/1:2,20:22:57.04:596,57,0	1/1:3,31:34:87.22:935,87,0	1/1:2,22:24:60.15:645,60,0	1/1:0,27:27:72.18:774,72,0	1/1:0,22:22:63.16:677,63,0	1/1:0,18:18:54.12:572,54,0	1/1:2,16:18:45.08:470,45,0	1/1:0,21:21:57.14:612,57,0	1/1:0,11:11:30.08:322,30,0	1/1:0,18:18:48.12:516,48,0	1/1:0,28:28:81.11:870,81,0	1/1:0,10:10:30.08:322,30,0	1/1:1,31:32:90.22:967,90,0	1/1:0,22:22:60.15:644,60,0	1/1:0,8:8:21.05:226,21,0
chr10	8805907	.	GA	G	552.99	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-1.752;DP=595;FS=0.000;HRun=4;HaplotypeScore=93.1595;InbreedingCoeff=0.9755;MQ=79.25;MQ0=0;MQRankSum=-0.613;QD=26.33;ReadPosRankSum=0.350;VQSLOD=2.3505;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,114,1535	0/0:14,0:14:39.12:0,39,529	0/0:12,0:11:15.98:0,16,257	0/0:18,0:18:21.12:0,21,327	0/0:26,0:26:78.26:0,78,1089	0/0:26,0:26:69.23:0,69,963	0/0:21,0:21:63.21:0,63,880	0/0:30,0:30:81.24:0,81,1060	1/1:1,20:21:54.17:648,54,0	0/0:30,0:30:87.26:0,87,1194	0/0:19,0:19:54.16:0,54,726	0/0:17,0:17:51.17:0,51,714	0/0:20,0:20:60.20:0,60,840	0/0:21,0:21:60.20:0,60,833	0/0:16,0:16:48.15:0,48,655	0/0:12,0:12:33.11:0,33,462	0/0:43,0:43:99:0,126,1745	0/0:22,0:22:54.16:0,54,738	0/0:24,0:24:66.20:0,66,906	0/0:22,0:22:66.22:0,66,924	0/0:16,0:16:48.16:0,48,672	0/0:14,0:14:42.14:0,42,581	0/0:18,0:18:51.17:0,51,714	0/0:15,0:15:45.15:0,45,627	0/0:20,0:19:54.17:0,54,739	0/0:27,0:27:81.27:0,81,1131	0/0:23,0:23:66.22:0,66,924	0/0:6,0:6:18.06:0,18,252
chr10	8805994	.	GA	G	7902.27	PASS	AB=0.985;AC=47;AF=0.839;AN=56;BaseQRankSum=2.809;DP=509;FS=3.258;HRun=1;HaplotypeScore=110.2764;InbreedingCoeff=0.3276;MQ=73.89;MQ0=0;MQRankSum=-3.125;QD=16.43;ReadPosRankSum=3.078;VQSLOD=5.3993;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,39:40:96.11:1299,96,0	1/1:12,0:12:23.81:121,24,0	0/0:11,0:10:24:0,24,285	0/1:11,1:12:27.69:28,0,181	1/1:0,16:16:41.83:518,42,0	1/1:1,31:32:80.95:1071,81,0	1/1:0,23:23:54.18:749,54,0	1/1:29,0:29:74.39:460,74,0	0/1:17,0:17:17.86:28,0,18	0/0:17,0:17:30.20:0,30,218	0/1:19,0:19:14.97:15,0,77	1/1:15,0:15:28.02:173,28,0	1/1:19,0:19:42.92:226,43,0	1/1:16,0:16:37.34:147,37,0	0/1:22,0:22:2.45:34,0,2	1/1:0,15:15:39.06:518,39,0	1/1:35,0:35:85.72:476,86,0	1/1:1,12:13:29.83:387,30,0	1/1:18,0:18:49.31:307,49,0	1/1:13,0:13:31.96:201,32,0	1/1:15,0:15:32.21:156,32,0	1/1:12,0:12:16.35:141,16,0	0/1:16,0:16:8.44:29,0,8	1/1:20,0:20:0.62:30,1,0	1/1:0,13:13:21.07:291,21,0	1/1:20,0:20:25.53:296,26,0	1/1:16,0:16:39.81:183,40,0	1/1:3,0:3:5.03:20,5,0
chr10	8805995	.	AG	A	4061.52	PASS	AB=0.875;AC=27;AF=0.482;AN=56;BaseQRankSum=-5.057;DP=504;FS=0.771;HRun=9;HaplotypeScore=122.6771;InbreedingCoeff=0.9035;MQ=75.59;MQ0=0;MQRankSum=-0.010;QD=14.82;ReadPosRankSum=3.951;VQSLOD=3.1201;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:41,0:41:75.94:481,76,0	0/0:12,0:12:26.81:0,27,202	0/0:12,0:10:20.70:0,21,226	0/1:12,2:14:42.34:42,0,157	1/1:16,0:16:35.02:207,35,0	1/1:32,0:32:56.15:361,56,0	1/1:23,0:23:51.90:273,52,0	0/0:29,0:29:52.18:0,52,271	1/1:3,13:16:12.38:352,12,0	1/1:8,9:17:29.96:267,30,0	1/1:3,15:18:36.02:329,36,0	0/0:15,0:15:35.69:0,36,262	0/0:17,0:17:38.55:0,39,263	0/0:16,0:16:47.60:0,48,350	1/1:2,20:22:50.47:489,50,0	1/1:15,0:15:34.46:179,34,0	0/0:34,0:34:74.74:0,75,527	1/1:13,0:13:17.72:128,18,0	0/0:19,0:19:41.54:0,42,245	0/0:12,0:12:23.67:0,24,162	0/0:13,0:13:32.57:0,33,218	0/0:12,0:12:20.25:0,20,144	1/1:0,15:15:39.02:357,39,0	1/1:0,19:19:54.03:494,54,0	1/1:13,0:13:20.12:103,20,0	0/0:19,1:20:8.35:0,8,178	0/0:16,0:16:38.45:0,38,248	0/0:3,0:3:8.92:0,9,63
chr10	8807045	.	G	GAC	14549.79	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=13.844;DP=772;FS=13.054;HRun=0;HaplotypeScore=201.4150;InbreedingCoeff=0.9578;MQ=56.34;MQ0=3;MQRankSum=-0.923;QD=25.71;ReadPosRankSum=2.049;VQSLOD=4.8181;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,35:43:93.31:1449,93,0	1/1:2,3:5:2.30:46,2,0	0/0:32,0:15:18.04:0,18,201	0/0:37,0:18:15.38:0,15,127	1/1:9,22:31:47.95:724,48,0	1/1:7,24:31:66.22:1041,66,0	1/1:20,19:42:47.47:626,47,0	1/1:26,8:36:62.30:740,62,0	0/0:25,0:24:47.87:0,48,433	0/0:23,0:23:53.99:0,54,624	0/0:17,0:17:20.74:0,21,323	1/1:9,30:39:75.25:1176,75,0	1/1:10,12:22:26.88:387,27,0	1/1:8,18:27:51.92:748,52,0	0/0:25,0:25:60.19:0,60,738	1/1:5,28:33:72.25:1129,72,0	1/1:10,33:45:68.90:1410,69,0	1/1:9,13:22:45.02:675,45,0	1/1:15,9:24:39.46:506,39,0	1/1:7,14:21:32.71:423,33,0	1/1:18,25:45:74.44:1079,74,0	1/1:14,14:27:41.56:591,42,0	0/0:17,0:17:33.10:0,33,402	0/0:30,0:30:75.20:0,75,894	1/1:11,11:21:26.57:394,27,0	1/1:13,14:28:58.36:832,58,0	1/1:9,7:15:27.07:383,27,0	1/1:0,4:4:12.04:189,12,0
chr10	8807060	.	ATT	A	8937	PASS	AB=0.923;AC=43;AF=0.768;AN=56;BaseQRankSum=10.878;DP=682;FS=8.424;HRun=9;HaplotypeScore=204.0668;InbreedingCoeff=0.8919;MQ=63.32;MQ0=2;MQRankSum=-2.430;QD=16.19;ReadPosRankSum=1.771;VQSLOD=1.3957;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:44,0:44:99:1009,124,0	1/1:4,0:4:1.50:6,1,0	0/0:24,0:15:9.13:0,9,346	0/1:21,0:14:2.10:2,0,161	1/1:26,3:29:45.84:387,46,0	1/1:25,0:25:66.43:450,66,0	1/1:35,1:36:44.85:356,45,0	1/1:22,8:30:71.43:631,71,0	1/1:2,21:22:45.11:514,45,0	0/0:21,0:21:63.17:0,63,997	0/0:14,0:14:38.95:0,39,555	1/1:33,0:33:76.29:539,76,0	1/1:21,1:22:42.64:362,43,0	1/1:22,1:23:32.76:257,33,0	0/0:25,0:25:72.25:0,72,1166	1/1:30,0:30:78.82:571,79,0	1/1:43,2:45:99:955,115,0	1/1:19,0:20:47.22:382,47,0	1/1:20,1:21:51.85:455,52,0	1/1:19,1:19:23.49:201,23,0	1/1:39,1:40:68.92:547,69,0	1/1:19,0:19:41.09:321,41,0	0/0:15,0:15:39.13:0,39,635	0/0:30,0:30:84.26:0,84,1301	1/1:16,2:17:29.29:237,29,0	1/1:24,2:26:55.21:475,55,0	1/1:14,0:14:23.49:162,23,0	1/1:5,0:5:14.88:116,15,0
chr10	8807272	.	G	GGAGAGAGAGAGA	4910.25	PASS	AB=0.919;AC=32;AF=0.667;AN=48;BaseQRankSum=-1.274;DP=522;FS=4.494;HRun=0;HaplotypeScore=186.0994;InbreedingCoeff=0.4707;MQ=58.75;MQ0=2;MQRankSum=-5.374;QD=13.95;ReadPosRankSum=-5.133;VQSLOD=2.3436;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:29:20.23:20,0,203	0/1:7,0:7:70.13:70,0,97	./.	./.	0/0:12,0:12:12.01:0,12,207	0/0:27,0:27:15.03:0,15,384	0/0:18,0:19:24.97:0,25,643	1/1:31,0:31:33.21:480,33,0	0/1:12,0:23:1.19:1,0,253	1/1:13,0:17:24.08:580,24,0	./.	1/1:18,0:18:15.04:295,15,0	1/1:11,0:17:12.04:403,12,0	1/1:26,0:25:18.02:338,18,0	1/1:12,0:18:9.03:308,9,0	0/0:21,0:23:17.72:0,18,1142	1/1:11,0:15:6.02:180,6,0	0/1:14,0:18:18.47:18,0,498	1/1:26,0:25:25:409,25,0	1/1:6,0:6:12.04:254,12,0	1/1:14,0:12:2.91:24,3,0	1/1:16,0:15:2.83:69,3,0	0/0:5,0:5:0.47:0,0,1	1/1:15,4:26:5.07:347,5,0	0/0:10,0:10:3.01:0,3,71	1/1:22,0:22:19.88:556,20,0	1/1:18,0:22:21.07:557,21,0	./.
chr10	8807859	.	CTCCT	C	1731.66	PASS	AB=0.936;AC=26;AF=0.500;AN=52;BaseQRankSum=3.270;DP=288;FS=0.809;HRun=0;HaplotypeScore=57.5960;InbreedingCoeff=0.2081;MQ=31.91;MQ0=39;MQRankSum=1.682;QD=10.89;ReadPosRankSum=1.264;VQSLOD=2.5628;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:9,0:8:10.91:104,0,11	0/1:2,2:4:5.02:56,0,5	0/0:21,0:4:12.04:0,12,282	0/0:34,0:5:15.05:0,15,235	1/1:5,0:4:3.56:13,4,0	1/1:10,0:7:3.12:18,3,0	0/1:8,0:8:7.43:57,0,7	0/1:9,0:7:11.92:21,0,12	0/0:3,0:3:2.97:0,3,20	0/0:16,0:10:22.63:0,23,286	0/0:8,0:7:3.01:0,3,49	1/1:5,4:10:10.07:140,10,0	1/1:4,4:7:17.55:288,18,0	1/1:7,1:6:14.64:187,15,0	0/0:15,0:14:11.92:0,12,232	0/0:10,0:7:1.73:0,2,23	0/1:5,0:4:0.43:32,0,0	0/1:8,0:5:23.79:25,0,24	1/1:5,0:4:6.01:76,6,0	./.	./.	1/1:4,6:8:2.80:39,3,0	0/0:10,0:7:10.26:0,10,118	0/1:13,0:10:0:0,0,0	0/1:13,0:10:1.38:102,0,1	0/1:9,7:14:99:422,0,180	1/1:7,1:8:6.57:113,7,0	0/1:9,0:9:1.18:195,0,1
chr10	8807861	.	CCT	C	1485.66	PASS	AB=0.963;AC=32;AF=0.571;AN=56;BaseQRankSum=3.206;DP=284;FS=0.875;HRun=0;HaplotypeScore=54.3203;InbreedingCoeff=0.4477;MQ=35.61;MQ0=39;MQRankSum=0.406;QD=9.97;ReadPosRankSum=-0.446;VQSLOD=2.7633;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,3:6:12:154,12,0	1/1:4,0:4:1.68:25,2,0	0/0:21,0:4:11.97:0,12,174	0/0:42,0:6:17.55:0,18,236	1/1:2,3:4:6:63,6,0	1/1:7,2:6:4.56:16,5,0	1/1:4,2:7:2.56:79,3,0	0/1:9,0:7:15.23:15,0,21	0/0:1,0:1:2.74:0,3,12	0/0:11,0:6:15.05:0,15,247	0/0:7,0:6:3.01:0,3,49	1/1:8,2:10:11.81:144,12,0	1/1:5,2:6:14.99:154,15,0	1/1:6,2:7:12.03:142,12,0	0/0:15,0:14:11.95:0,12,187	0/1:6,1:7:10.34:14,0,10	1/1:3,1:3:2.59:37,3,0	1/1:4,1:2:5.75:49,6,0	0/1:6,0:4:0:0,0,0	0/0:5,0:5:0.47:0,0,1	0/0:5,1:3:0.47:0,0,1	1/1:11,2:11:12.01:117,12,0	0/0:10,0:7:7.42:0,7,113	0/0:15,0:11:2.99:0,3,23	1/1:8,2:8:9.50:114,9,0	0/1:16,1:15:99:202,0,124	1/1:3,3:7:9.03:117,9,0	1/1:5,4:9:11.37:210,11,0
chr10	8807898	.	T	TC	8322.81	PASS	AB=0.757;AC=41;AF=0.732;AN=56;BaseQRankSum=1.088;DP=503;FS=0.454;HRun=2;HaplotypeScore=87.4171;InbreedingCoeff=0.6988;MQ=56.33;MQ0=18;MQRankSum=-3.674;QD=26.42;ReadPosRankSum=2.074;VQSLOD=4.5341;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:2,8:9:8.51:311,0,9	1/1:2,4:6:12.04:191,12,0	0/1:78,0:22:5.60:6,0,598	0/0:88,0:31:24.07:0,24,698	1/1:2,8:10:18.06:288,18,0	1/1:0,7:7:15.05:240,15,0	1/1:1,19:20:54.18:860,54,0	1/1:5,14:20:45.15:709,45,0	1/1:3,5:8:12.04:173,12,0	0/0:22,0:22:51.17:0,51,713	0/0:18,0:18:42.14:0,42,585	1/1:1,11:12:33.04:496,33,0	1/1:0,11:11:33.11:526,33,0	1/1:0,12:12:36.12:549,36,0	0/0:25,0:24:51.13:0,51,691	1/1:3,11:13:36.12:562,36,0	1/1:3,10:13:7.35:410,7,0	1/1:1,7:8:17.12:329,17,0	0/1:3,2:5:71.56:84,0,72	1/1:2,7:9:21.07:335,21,0	1/1:1,5:5:3.01:47,3,0	1/1:1,19:20:30.10:467,30,0	0/0:13,0:13:27.55:0,28,363	0/0:21,0:18:26.55:0,27,377	1/1:4,9:13:24.08:383,24,0	1/1:4,16:20:15.20:783,15,0	1/1:0,6:6:15.05:240,15,0	1/1:1,6:7:21.07:335,21,0
chr10	8807964	.	T	TAGTCA	23214.72	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-9.731;DP=492;FS=31.002;HRun=0;HaplotypeScore=91.6324;InbreedingCoeff=0.9842;MQ=79.30;MQ0=0;MQRankSum=-10.126;QD=73.70;ReadPosRankSum=1.678;VQSLOD=3.4498;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,8:12:30.08:873,30,0	1/1:2,4:6:12.04:380,12,0	0/0:23,0:22:66.04:0,66,1235	0/0:25,0:25:56.10:0,56,1068	1/1:1,14:15:33.07:970,33,0	1/1:4,16:22:48.13:1298,48,0	1/1:3,15:20:45.15:1378,45,0	1/1:4,9:13:36.11:992,36,0	0/0:17,0:17:48.16:0,48,1041	0/0:21,0:21:51.16:0,51,1023	0/0:26,0:26:63.17:0,63,1230	1/1:3,12:17:45.15:1360,45,0	1/1:3,12:19:42.13:1254,42,0	1/1:1,10:12:33.11:1009,33,0	0/0:26,0:26:69.24:0,69,1496	1/1:8,14:22:60.18:1661,60,0	1/1:5,19:24:60.18:1789,60,0	1/1:1,17:18:51.17:1559,51,0	1/1:0,4:4:12.04:381,12,0	1/1:2,12:15:33.05:898,33,0	1/1:1,9:10:27.05:741,27,0	1/1:2,16:19:48.12:1393,48,0	0/0:18,0:18:48.16:0,48,1010	0/0:21,0:21:60.21:0,60,1299	1/1:5,15:20:48.16:1493,48,0	1/1:10,18:28:72.15:2054,72,0	1/1:0,14:15:45.15:1422,45,0	1/1:1,3:4:12.03:310,12,0
chr10	8808257	.	AT	A	3815.08	PASS	AB=0.933;AC=29;AF=0.518;AN=56;BaseQRankSum=3.951;DP=531;FS=3.653;HRun=13;HaplotypeScore=74.6031;InbreedingCoeff=0.7768;MQ=73.16;MQ0=0;MQRankSum=-0.254;QD=13.07;ReadPosRankSum=1.814;VQSLOD=4.1629;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:64.15:0,64,711	1/1:0,6:6:17.90:131,18,0	0/1:18,2:18:8:8,0,220	0/1:15,0:13:1.51:2,0,122	0/0:15,1:17:11.95:0,12,259	0/0:23,1:24:35.16:0,35,493	0/0:21,0:21:47.89:0,48,435	1/1:7,30:37:86.23:621,86,0	0/0:1,0:13:31.37:0,31,171	0/0:15,1:17:23:0,23,371	0/0:18,0:18:51.05:0,51,482	1/1:0,9:9:23.86:175,24,0	1/1:3,16:19:40.88:305,41,0	1/1:4,16:20:15.53:277,16,0	0/1:14,2:16:4.76:5,0,282	0/0:10,0:12:0.68:0,1,140	1/1:3,20:26:53.82:368,54,0	0/0:17,1:18:32.13:0,32,456	1/1:1,20:21:33.43:404,33,0	1/1:3,7:10:17.86:131,18,0	1/1:3,17:20:35.79:263,36,0	1/1:1,23:24:47.63:350,48,0	0/0:23,1:25:39.69:0,40,496	0/0:21,0:21:60.08:0,60,579	0/0:16,0:16:35.66:0,36,298	1/1:3,17:21:49.72:356,50,0	1/1:2,21:25:34.54:398,35,0	1/1:1,1:2:2.97:22,3,0
chr10	8808502	.	C	CTGTCTGCCCA	38345.92	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-5.113;DP=624;FS=15.300;HRun=0;HaplotypeScore=171.6399;InbreedingCoeff=0.9298;MQ=64.87;MQ0=0;MQRankSum=-15.250;QD=80.05;ReadPosRankSum=-3.236;VQSLOD=2.8633;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:21,19:46:90.31:3247,90,0	1/1:6,0:6:12.04:318,12,0	0/0:13,0:13:1.92:0,2,278	0/0:10,0:10:18.02:0,18,293	1/1:3,9:17:21.07:1051,21,0	1/1:3,7:11:24.08:1257,24,0	1/1:5,16:42:54.19:2527,54,0	1/1:11,9:31:90.31:3683,90,0	0/0:20,0:20:57.20:0,57,1803	0/0:17,0:17:41.78:0,42,1197	0/0:13,0:13:30.10:0,30,890	1/1:11,14:32:66.70:2602,67,0	1/1:7,22:37:66.23:3059,66,0	1/1:7,21:35:75.24:3293,75,0	0/0:22,0:22:63.22:0,63,1997	1/1:4,13:21:51.18:2273,51,0	1/1:11,13:32:51.17:2526,51,0	1/1:9,13:31:54.18:2589,54,0	1/1:7,2:17:42.08:1292,42,0	1/1:5,7:21:24.04:980,24,0	1/1:8,11:35:33.11:1305,33,0	1/1:8,6:15:21.07:997,21,0	0/0:12,0:12:33.11:0,33,1066	0/0:38,0:38:99:0,114,3627	1/1:4,3:8:9.03:472,9,0	1/1:2,16:21:63.22:2857,63,0	1/1:4,9:18:36.12:1704,36,0	1/1:0,2:3:6.02:315,6,0
chr10	8809850	.	GAC	G	17075.34	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=12.464;DP=849;FS=4.607;HRun=0;HaplotypeScore=141.3686;InbreedingCoeff=0.9966;MQ=60.20;MQ0=11;MQRankSum=-0.060;QD=28.70;ReadPosRankSum=4.516;VQSLOD=6.2924;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,51:55:99:1435,114,0	1/1:3,10:13:36.06:434,36,0	0/0:54,0:28:34.35:0,34,500	0/0:57,0:36:36.44:0,36,646	1/1:3,24:27:57.18:719,57,0	1/1:3,32:35:57.18:719,57,0	1/1:8,17:25:39.12:492,39,0	1/1:16,17:33:55.38:858,55,0	1/1:5,33:38:87.28:1098,87,0	0/0:33,0:33:84.29:0,84,1371	0/0:19,0:19:45.14:0,45,718	1/1:12,22:34:75.24:945,75,0	1/1:2,22:24:69.20:847,69,0	1/1:8,26:34:90.27:1121,90,0	0/0:24,0:24:68.45:0,68,1088	1/1:5,26:31:75.24:946,75,0	1/1:10,15:26:63.02:755,63,0	1/1:3,22:25:60.19:752,60,0	1/1:9,10:19:36.08:434,36,0	1/1:13,26:38:96.31:1208,96,0	1/1:8,22:30:72.23:905,72,0	1/1:3,15:19:47.98:581,48,0	0/0:30,0:30:75.24:0,75,1194	0/0:36,1:37:17.06:0,17,1291	1/1:3,24:27:63.20:795,63,0	1/1:5,14:19:51.16:642,51,0	1/1:5,28:32:93.29:1165,93,0	1/1:4,5:9:18.06:227,18,0
chr10	8809908	.	A	AC	10394.07	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=4.731;DP=799;FS=0.584;HRun=7;HaplotypeScore=151.8386;InbreedingCoeff=0.9949;MQ=86.38;MQ0=0;MQRankSum=-5.734;QD=28.32;ReadPosRankSum=2.783;VQSLOD=2.8196;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,99,942	1/1:1,15:16:42.13:507,42,0	0/0:33,0:34:72.07:0,72,683	0/0:30,0:30:34.81:0,35,437	0/0:23,0:23:60.09:0,60,579	0/0:38,0:38:78.10:0,78,742	0/0:23,0:23:60.08:0,60,573	1/1:12,28:40:87.24:1028,87,0	0/0:38,0:38:90.12:0,90,863	0/0:33,0:33:96.13:0,96,919	0/0:20,0:20:48.07:0,48,463	1/1:6,33:39:90.19:1051,90,0	1/1:1,29:30:78.16:909,78,0	1/1:5,29:35:75.05:868,75,0	0/0:35,0:35:96.14:0,96,922	0/0:27,0:27:63.10:0,63,608	1/1:3,24:28:75.18:887,75,0	0/0:19,0:19:44.97:0,45,410	1/1:1,19:20:57.14:663,57,0	1/1:3,21:24:65.95:757,66,0	1/1:8,23:31:63.19:761,63,0	1/1:3,23:26:60.18:724,60,0	0/0:24,0:24:60.08:0,60,574	0/0:24,0:24:60.10:0,60,579	0/0:22,0:22:48.06:0,48,463	1/1:5,20:25:11.20:676,11,0	1/1:5,35:40:99:1195,99,0	1/1:4,9:13:33.04:368,33,0
chr10	8810301	.	TAC	T	1000.13	PASS	AB=0.873;AC=36;AF=0.720;AN=50;BaseQRankSum=4.767;DP=478;FS=2.790;HRun=0;HaplotypeScore=80.0350;InbreedingCoeff=0.3500;MQ=56.24;MQ0=9;MQRankSum=-1.149;QD=3.21;ReadPosRankSum=1.080;VQSLOD=2.1058;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:32,0:32:13.01:13,0,90	1/1:10,0:10:11.36:55,11,0	./.	./.	0/0:23,0:23:15.04:0,15,190	0/0:18,0:18:24.04:0,24,316	0/0:14,0:14:6.48:0,6,57	./.	1/1:13,5:19:14.87:143,15,0	1/1:9,0:10:4.98:38,5,0	0/1:10,8:17:28:114,0,28	1/1:15,0:15:17.04:84,17,0	1/1:18,0:18:14.16:69,14,0	1/1:12,0:12:11.36:56,11,0	1/1:13,4:18:14.87:143,15,0	0/0:15,0:15:14.82:0,15,139	1/1:17,0:17:0.59:61,1,0	0/0:14,0:15:1.38:0,1,98	1/1:14,0:12:2.84:14,3,0	1/1:20,0:20:17.04:84,17,0	1/1:16,0:16:5.35:25,5,0	1/1:16,0:16:8.52:42,9,0	0/1:12,4:15:52.44:52,0,72	1/1:18,4:23:5.93:64,6,0	0/1:12,0:12:10.61:11,0,63	1/1:17,0:17:8.52:42,9,0	1/1:6,0:5:2.82:23,3,0	1/1:3,0:3:5.68:28,6,0
chr10	8810345	.	CACA	C	669.77	PASS	AB=0.853;AC=13;AF=0.232;AN=56;BaseQRankSum=7.909;DP=529;FS=5.944;HRun=0;HaplotypeScore=124.4516;InbreedingCoeff=-0.3009;MQ=60.16;MQ0=14;MQRankSum=-2.795;QD=3.02;ReadPosRankSum=0.453;VQSLOD=2.1018;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:31.98:0,32,315	0/1:9,2:11:31.13:76,0,31	0/0:12,0:5:15.05:0,15,179	0/0:22,0:11:26.60:0,27,310	0/0:20,0:20:10.54:0,11,359	0/0:21,0:21:53.90:0,54,606	0/0:11,0:11:8.82:0,9,108	0/0:23,0:22:46.03:0,46,206	0/0:26,0:26:53.04:0,53,662	0/0:21,0:21:47.36:0,47,613	0/0:27,0:26:42.42:0,42,553	0/1:9,6:14:53.93:136,0,54	0/1:10,5:15:92.50:100,0,93	0/1:8,4:12:56.39:91,0,56	0/0:24,0:24:42.88:0,43,559	0/0:17,0:17:12.42:0,12,174	0/1:23,4:27:99:117,0,195	0/1:16,1:17:13.35:13,0,173	0/1:18,1:19:4.92:5,0,157	0/1:17,5:22:71.54:141,0,72	0/1:15,2:17:31.63:32,0,55	0/1:15,3:18:42.98:43,0,86	0/0:15,0:15:35.90:0,36,446	0/0:21,0:20:50.91:0,51,565	0/0:21,0:21:11.94:0,12,151	0/1:21,1:22:26.02:26,0,176	0/1:14,2:16:9.70:10,0,130	0/1:9,2:10:30.34:30,0,78
chr10	8810348	.	A	ACC	5710.83	PASS	AB=0.548;AC=39;AF=0.696;AN=56;BaseQRankSum=4.932;DP=515;FS=3.619;HRun=2;HaplotypeScore=104.7079;InbreedingCoeff=0.8664;MQ=60.63;MQ0=14;MQRankSum=-1.316;QD=16.09;ReadPosRankSum=-1.872;VQSLOD=1.6720;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:23:48.57:409,49,0	1/1:12,0:12:31.63:225,32,0	0/0:12,0:5:14.47:0,14,115	0/0:22,0:11:20.10:0,20,219	1/1:5,10:15:17.72:149,18,0	1/1:18,0:18:17.01:328,17,0	1/1:0,9:9:8.98:129,9,0	1/1:25,0:24:62.87:538,63,0	0/0:25,0:25:65.36:0,65,553	0/0:20,0:20:56.70:0,57,491	0/0:23,0:22:50.69:0,51,415	1/1:17,0:17:41.88:275,42,0	1/1:15,0:15:38.85:260,39,0	1/1:14,0:14:40.72:297,41,0	0/0:22,0:23:56.73:0,57,472	0/1:2,14:17:12.78:119,0,13	1/1:27,0:27:61.66:503,62,0	1/1:3,12:15:8.40:175,8,0	1/1:19,0:19:35.92:319,36,0	1/1:21,0:21:47.51:335,48,0	1/1:18,0:18:26.43:216,26,0	1/1:18,0:18:45.35:350,45,0	0/0:16,0:16:32.98:0,33,296	0/0:19,0:18:44.93:0,45,372	1/1:3,17:21:3.01:56,3,0	1/1:24,0:24:33.70:456,34,0	1/1:15,0:15:44.04:346,44,0	1/1:11,0:10:29.31:224,29,0
chr10	8815096	.	GACACACAC	G	2068.24	PASS	AC=14;AF=0.259;AN=54;BaseQRankSum=5.709;DP=675;FS=4.445;HRun=0;HaplotypeScore=159.5299;InbreedingCoeff=0.8784;MQ=74.85;MQ0=18;MQRankSum=-8.319;QD=13.61;ReadPosRankSum=0.751;VQSLOD=2.8172;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:27,11:38:5.44:53,5,0	0/0:6,0:7:12.04:0,12,354	./.	0/0:55,0:33:3.01:0,3,65	1/1:8,7:18:17.16:267,17,0	1/1:9,7:15:15.05:376,15,0	1/1:14,5:19:9.03:183,9,0	0/0:16,0:16:6.91:0,7,149	0/0:12,0:29:30.10:0,30,855	0/0:14,0:23:29.97:0,30,959	0/0:19,0:20:26.75:0,27,945	0/0:25,0:27:51.18:0,51,1718	0/0:18,0:17:39.12:0,39,1255	0/0:18,0:22:24.08:0,24,781	0/0:13,0:21:12.04:0,12,384	1/1:13,11:25:21.07:507,21,0	0/0:21,0:24:30.09:0,30,944	1/1:5,7:13:8.51:205,9,0	0/0:17,0:18:20.28:0,20,564	0/0:12,0:16:30.10:0,30,958	0/0:39,0:39:57.18:0,57,1905	0/0:23,0:26:45.14:0,45,1524	0/0:14,0:14:11.96:0,12,346	0/0:21,0:28:12:0,12,307	1/1:8,12:22:32.03:659,32,0	0/0:23,0:22:36.12:0,36,1189	0/0:22,0:25:48.16:0,48,1565	0/0:14,0:14:27.09:0,27,854
chr10	8816250	.	TTCTCTCTCTCTC	T	1433.89	PASS	AB=0.880;AC=27;AF=0.563;AN=48;BaseQRankSum=1.522;DP=517;FS=10.201;HRun=0;HaplotypeScore=187.2280;InbreedingCoeff=0.4835;MQ=72.19;MQ0=13;MQRankSum=-0.900;QD=5.51;ReadPosRankSum=2.214;VQSLOD=1.8606;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:19:9.03:0,9,356	./.	./.	./.	0/0:13,0:12:3.01:0,3,74	0/0:24,0:23:15.05:0,15,433	0/0:21,0:21:4.30:0,4,21	1/1:30,0:30:2.85:42,3,0	1/1:16,0:16:8.56:82,9,0	1/1:15,0:16:4.40:81,4,0	1/1:13,0:14:2.94:23,3,0	0/0:14,4:18:0.89:0,1,2	1/1:13,2:17:6.02:192,6,0	1/1:22,1:29:6.01:67,6,0	0/0:16,0:17:0.94:0,1,2	0/0:12,0:12:15.99:0,16,318	1/1:15,2:15:3.01:101,3,0	0/0:10,0:9:9.03:0,9,244	1/1:16,0:16:3.01:64,3,0	0/1:19,1:22:19.98:66,0,20	./.	0/0:11,4:17:1.82:0,2,7	1/1:16,0:18:2.74:93,3,0	1/1:16,1:17:6.47:97,6,0	0/0:21,0:21:12.04:0,12,425	1/1:17,1:18:9.50:305,10,0	1/1:11,5:19:12:324,12,0	1/1:7,0:7:3.01:50,3,0
chr10	8816293	.	T	TCACACACACA	586.25	PASS	AB=1.000;AC=16;AF=0.308;AN=52;BaseQRankSum=5.174;DP=470;FS=2.798;HRun=0;HaplotypeScore=174.4025;InbreedingCoeff=0.1322;MQ=37.98;MQ0=31;MQRankSum=-0.746;QD=2.53;ReadPosRankSum=-1.874;VQSLOD=2.7381;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:16:9.50:0,10,193	0/0:8,0:8:6.23:0,6,82	0/0:9,0:3:6.02:0,6,188	./.	0/1:14,0:9:65.48:84,0,65	0/0:13,0:12:15.18:0,15,241	1/1:21,0:17:8.11:98,8,0	0/0:17,0:17:43:0,43,760	0/1:19,0:19:8.12:102,0,8	0/1:22,0:20:99:207,0,464	./.	0/0:22,0:21:32.32:0,32,609	0/1:22,0:21:46.53:47,0,506	0/0:25,0:23:38.70:0,39,892	1/1:27,0:25:2.35:13,2,0	0/0:26,0:23:8.80:0,9,112	0/1:18,0:17:11.58:12,0,463	0/1:8,0:6:14.51:15,0,118	0/0:10,0:10:17.94:0,18,248	0/1:21,0:21:1.48:37,0,1	0/0:15,0:13:2.98:0,3,72	0/0:16,0:16:12.33:0,12,214	1/1:19,0:18:3.01:37,3,0	1/1:20,0:17:7.10:37,7,0	0/0:9,4:12:11.60:0,12,187	0/0:18,0:17:4.18:0,4,705	0/1:21,0:19:51.72:52,0,427	0/0:5,0:4:6.02:0,6,157
chr10	8816295	.	T	TCACACACA	771.67	PASS	AB=1.000;AC=15;AF=0.278;AN=54;BaseQRankSum=4.060;DP=480;FS=3.704;HRun=0;HaplotypeScore=162.3022;InbreedingCoeff=0.1413;MQ=38.31;MQ0=31;MQRankSum=0.764;QD=3.61;ReadPosRankSum=-1.327;VQSLOD=2.2766;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:16:5.97:0,6,82	0/0:8,0:8:6.02:0,6,75	0/0:10,0:3:8.99:0,9,189	0/0:11,0:1:3.01:0,3,39	0/1:14,0:9:30.26:65,0,30	0/0:13,0:12:7.42:0,7,86	1/1:22,0:18:14.87:162,15,0	0/0:19,0:19:52.40:0,52,608	0/1:19,0:19:8.66:89,0,9	0/1:22,0:20:99:443,0,334	./.	0/0:22,0:21:28.86:0,29,375	0/1:22,0:21:8.35:8,0,316	0/0:25,0:23:34.06:0,34,623	1/1:27,0:25:2.75:38,3,0	0/0:19,6:24:5.46:0,5,48	0/0:20,0:19:2.44:0,2,277	0/1:8,0:6:35.31:35,0,52	0/0:10,0:10:14.33:0,14,187	0/1:21,0:21:9.89:10,0,15	0/0:16,0:14:7.92:0,8,69	0/0:17,0:17:10.79:0,11,107	1/1:19,0:18:2.98:21,3,0	1/1:19,0:16:5.31:42,5,0	0/0:12,0:11:8.61:0,9,104	0/0:18,0:17:11.87:0,12,479	0/1:21,0:19:10.35:10,0,309	0/0:5,0:4:6.02:0,6,105
chr10	8816328	.	C	CAT	8919.54	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=3.469;DP=521;FS=4.485;HRun=0;HaplotypeScore=90.6057;InbreedingCoeff=0.9255;MQ=66.29;MQ0=18;MQRankSum=-2.751;QD=26.31;ReadPosRankSum=2.379;VQSLOD=5.6717;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:21.53:0,22,159	1/1:9,0:8:24:252,24,0	0/0:42,0:20:46.38:0,46,577	0/0:44,0:21:37.12:0,37,434	0/0:11,0:11:13.89:0,14,121	0/0:12,0:12:26.91:0,27,216	0/0:12,0:11:16.81:0,17,129	1/1:21,16:36:99:1278,108,0	1/1:0,14:14:5.98:53,6,0	1/1:12,9:21:61.30:656,61,0	1/1:7,0:5:8.93:65,9,0	1/1:19,0:19:54.96:724,55,0	1/1:17,0:16:47.74:609,48,0	1/1:26,0:26:70.17:838,70,0	1/1:25,0:25:62.43:532,62,0	0/0:17,0:16:3.93:0,4,108	1/1:21,0:21:57:663,57,0	0/0:13,0:13:27.07:0,27,184	1/1:14,4:18:53.43:502,53,0	1/1:12,12:24:50.64:401,51,0	1/1:17,0:16:35.52:307,36,0	1/1:12,0:12:35.72:408,36,0	1/1:8,7:15:20.99:179,21,0	1/1:9,0:11:17.02:154,17,0	0/0:12,0:12:20.47:0,20,172	1/1:10,11:21:51.07:604,51,0	1/1:21,0:19:53.72:595,54,0	1/1:3,0:3:6.02:99,6,0
chr10	8816813	.	T	TCTTCCATGTGAGG	68005.80	PASS	AB=1.000;AC=44;AF=0.786;AN=56;BaseQRankSum=-17.081;DP=730;FS=1.045;HRun=0;HaplotypeScore=271.0601;InbreedingCoeff=0.1537;MQ=78.75;MQ0=0;MQRankSum=-5.478;QD=101.35;ReadPosRankSum=-0.247;VQSLOD=4.4488;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:4,0:33:99:756,0,636	1/1:7,14:21:54.02:3510,54,0	0/0:30,0:29:78.20:0,78,2687	0/0:28,0:29:78.23:0,78,2639	0/1:0,0:22:99:275,0,493	0/1:2,0:24:99:209,0,745	0/1:4,0:25:99:506,0,601	1/1:12,16:34:99:5312,99,0	0/1:4,0:31:99:680,0,643	1/1:6,24:34:99:5324,99,0	1/1:6,16:25:51.17:3034,51,0	1/1:11,19:34:84.25:5090,84,0	1/1:13,29:49:99:6552,106,0	1/1:9,20:34:78.27:5026,78,0	1/1:10,22:34:75.17:4558,75,0	0/1:0,0:22:13.20:13,0,737	1/1:3,11:14:30.10:1764,30,0	0/1:0,0:8:83.17:83,0,224	1/1:7,3:13:36.12:1753,36,0	1/1:12,16:31:66.18:3982,66,0	1/1:4,4:11:15.01:498,15,0	1/1:9,21:38:63.21:3860,63,0	1/1:7,18:27:54.16:3181,54,0	1/1:6,12:21:33.11:2070,33,0	0/1:0,0:17:99:229,0,545	1/1:6,20:29:81.06:4631,81,0	1/1:13,17:30:69.24:4311,69,0	1/1:2,6:10:12.04:797,12,0
chr10	8816816	.	TG	T	2184.60	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-3.456;DP=617;FS=2.466;HRun=1;HaplotypeScore=286.8014;InbreedingCoeff=0.9705;MQ=81.45;MQ0=0;MQRankSum=-5.474;QD=12.63;ReadPosRankSum=-1.118;VQSLOD=2.2919;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,29:29:77.27:393,77,0	0/0:20,0:20:51.17:0,51,781	0/0:31,0:29:86.91:0,87,1278	0/0:27,0:27:69.21:0,69,1163	1/1:1,22:23:46.09:221,46,0	1/1:0,22:22:62.95:316,63,0	1/1:1,21:22:60.53:324,61,0	0/0:18,1:19:37.71:0,38,837	1/1:3,26:29:77.76:403,78,0	0/0:24,0:24:72.24:0,72,1121	0/0:20,0:20:35.96:0,36,529	0/0:32,0:32:72.23:0,72,1074	0/0:39,1:40:75.60:0,76,1289	0/0:30,0:30:60.20:0,60,913	0/0:26,0:26:54.18:0,54,824	1/1:0,22:22:63:335,63,0	0/0:13,0:13:36.09:0,36,531	1/1:0,8:8:23.34:137,23,0	0/0:9,0:9:27.09:0,27,429	0/0:27,0:27:54.18:0,54,813	0/0:8,0:8:5.52:0,6,86	0/0:27,0:27:43.60:0,44,712	0/0:21,0:21:32.63:0,33,499	0/0:18,0:18:25.94:0,26,365	1/1:1,17:18:51.53:263,52,0	0/0:21,0:21:55.42:0,55,931	0/0:27,0:27:51.17:0,51,782	0/0:4,0:4:9.03:0,9,130
chr10	8816818	.	TCC	T	3149.94	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-1.345;DP=626;FS=0.701;HRun=4;HaplotypeScore=290.3764;InbreedingCoeff=0.9930;MQ=80.52;MQ0=0;MQRankSum=-9.117;QD=18.31;ReadPosRankSum=-0.259;VQSLOD=-0.0447;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,29:29:86.31:611,86,0	0/0:20,0:20:60.20:0,60,1065	0/0:29,0:27:80.22:0,80,1377	0/0:28,0:28:81.07:0,81,1433	1/1:1,22:23:50.43:346,50,0	1/1:0,22:22:59.55:425,60,0	1/1:0,21:21:59.52:421,60,0	0/0:19,1:20:40.11:0,40,1042	1/1:2,26:29:77.39:556,77,0	0/0:24,0:24:72.25:0,72,1344	0/0:20,0:20:36.12:0,36,670	0/0:32,0:32:90.31:0,90,1584	0/0:39,1:40:77.48:0,77,1719	0/0:31,0:31:72.20:0,72,1273	0/0:26,0:26:60.12:0,60,1049	1/1:0,22:22:62.39:445,62,0	0/0:13,0:13:36.12:0,36,668	1/1:0,8:8:23.88:180,24,0	0/0:11,0:11:33.11:0,33,598	0/0:28,0:28:66.14:0,66,1133	0/0:11,0:11:18.06:0,18,291	0/0:28,0:28:42.27:0,42,943	0/0:22,0:22:35.84:0,36,667	0/0:19,0:19:29.84:0,30,499	1/1:1,17:18:53.47:375,53,0	0/0:21,0:21:50.92:0,51,1109	0/0:27,0:27:60.20:0,60,1072	0/0:4,0:4:12.04:0,12,209
chr10	8818469	.	TAACAACAACAAC	T	16531.06	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=0.846;DP=508;FS=2.464;HRun=0;HaplotypeScore=190.8572;InbreedingCoeff=0.6169;MQ=61.08;MQ0=4;MQRankSum=-1.271;QD=36.33;ReadPosRankSum=2.021;VQSLOD=4.7103;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:17,13:30:36.12:1230,36,0	1/1:5,7:12:15.01:434,15,0	0/0:20,0:15:3.01:0,3,82	0/0:17,0:11:6.49:0,6,133	1/1:14,13:27:33.11:991,33,0	1/1:12,21:32:42.14:1451,42,0	1/1:15,6:21:14.35:518,14,0	1/1:15,0:15:3.01:55,3,0	0/0:9,0:16:9.48:0,9,469	1/1:9,0:13:10.55:333,11,0	1/1:3,0:13:30.10:838,30,0	1/1:8,6:15:15.05:499,15,0	1/1:5,9:14:19.91:724,20,0	1/1:13,12:25:30.10:1038,30,0	1/1:11,0:22:27.09:753,27,0	1/1:7,7:14:18.06:623,18,0	1/1:17,5:22:8.82:137,9,0	1/1:9,6:14:8.55:310,9,0	1/1:14,3:18:21.04:528,21,0	1/1:12,13:25:39.13:1296,39,0	1/1:6,0:6:3.01:38,3,0	1/1:6,8:15:18.06:621,18,0	1/1:8,0:19:27.09:704,27,0	1/1:8,0:8:2.74:12,3,0	1/1:12,14:26:30.10:1035,30,0	1/1:8,10:18:30.07:930,30,0	1/1:10,13:24:39.13:1329,39,0	1/1:2,2:4:3.01:104,3,0
chr10	8820029	.	TG	T	8866.81	PASS	AB=1.000;AC=49;AF=0.875;AN=56;BaseQRankSum=8.832;DP=749;FS=0.921;HRun=3;HaplotypeScore=184.8045;InbreedingCoeff=0.5157;MQ=86.86;MQ0=0;MQRankSum=-8.627;QD=12.68;ReadPosRankSum=9.604;VQSLOD=2.7644;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:35,0:35:65.46:331,65,0	0/1:5,0:5:23.76:24,0,28	0/0:25,0:25:69.19:0,69,948	0/0:25,0:25:68.52:0,69,961	1/1:30,0:30:51.79:284,52,0	0/1:28,0:27:22.60:184,0,23	1/1:21,0:21:49.99:205,50,0	1/1:46,0:46:8.49:284,8,0	1/1:37,0:37:65.68:360,66,0	1/1:1,24:25:75.19:903,75,0	1/1:3,21:24:66.07:771,66,0	1/1:23,0:23:49.85:205,50,0	1/1:26,0:26:58.49:274,58,0	1/1:28,0:28:68.67:280,69,0	1/1:0,25:25:72.23:893,72,0	1/1:27,0:27:45.20:234,45,0	1/1:25,0:25:33.02:209,33,0	1/1:30,0:30:6.61:245,7,0	1/1:29,0:29:15.20:177,15,0	1/1:33,0:33:46.43:317,46,0	1/1:30,0:30:53.68:261,54,0	0/1:26,0:26:0.28:190,0,0	1/1:1,17:18:39.08:466,39,0	1/1:0,28:28:72.23:892,72,0	1/1:28,0:28:13.16:183,13,0	1/1:32,1:33:82.31:342,82,0	1/1:35,0:33:34.41:297,34,0	1/1:4,0:4:11.41:60,11,0
chr10	8820032	.	GT	G	19484.45	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=4.966;DP=742;FS=7.599;HRun=4;HaplotypeScore=146.2132;InbreedingCoeff=0.9093;MQ=85.83;MQ0=0;MQRankSum=-10.719;QD=28.08;ReadPosRankSum=6.610;VQSLOD=2.8937;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,33:34:96.29:1151,96,0	1/1:1,4:5:9.03:108,9,0	0/0:23,0:23:63.21:0,63,855	0/0:25,0:25:62.42:0,62,825	1/1:1,29:30:81.25:971,81,0	1/1:3,27:29:69.21:827,69,0	1/1:0,21:21:57.17:683,57,0	1/1:4,43:47:99:1524,129,0	1/1:1,38:39:99:1187,99,0	1/1:24,1:25:59.62:253,60,0	1/1:23,2:25:8.98:240,9,0	1/1:0,22:22:57.17:683,57,0	1/1:0,25:25:65.90:788,66,0	1/1:0,28:28:78.24:935,78,0	1/1:25,0:24:62.74:255,63,0	1/1:0,26:26:75.23:899,75,0	1/1:1,23:24:63.19:755,63,0	1/1:1,28:29:72.65:959,73,0	1/1:3,26:29:75.22:889,75,0	1/1:1,32:33:93.28:1115,93,0	1/1:2,27:29:81.03:931,81,0	1/1:2,23:25:63.19:755,63,0	1/1:18,0:18:10.44:118,10,0	1/1:28,0:28:64.97:290,65,0	1/1:1,24:25:69.21:828,69,0	1/1:2,31:33:71.04:1096,71,0	1/1:1,34:35:93.25:1100,93,0	1/1:0,4:4:12.04:144,12,0
chr10	8820187	.	G	GT	9889.37	PASS	AB=0.600;AC=41;AF=0.732;AN=56;BaseQRankSum=-9.213;DP=641;FS=14.056;HRun=11;HaplotypeScore=67.7113;InbreedingCoeff=0.9017;MQ=73.80;MQ0=1;MQRankSum=-1.074;QD=20.14;ReadPosRankSum=2.354;VQSLOD=4.8525;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,23:30:10.81:535,11,0	1/1:1,6:7:17.63:162,18,0	0/0:22,0:17:10.35:0,10,91	0/0:20,0:16:19.61:0,20,172	1/1:5,27:32:39.12:648,39,0	1/1:4,20:24:18.85:373,19,0	1/1:6,12:18:9.91:281,10,0	1/1:8,16:25:44.90:432,45,0	1/1:6,20:27:45.26:426,45,0	0/0:30,0:30:27.23:0,27,495	0/0:18,0:18:44.72:0,45,337	1/1:5,26:31:62.84:639,63,0	1/1:1,22:23:44.80:456,45,0	1/1:2,21:23:54.11:548,54,0	0/0:19,1:21:19.38:0,19,324	1/1:3,19:22:45.09:457,45,0	1/1:2,21:23:45.09:457,45,0	1/1:7,15:23:47.93:471,48,0	0/1:9,18:27:0.08:498,0,0	1/1:3,28:31:60.90:771,61,0	1/1:1,2:3:6.01:61,6,0	1/1:1,19:20:45.09:457,45,0	0/0:24,0:24:56.70:0,57,436	0/0:14,0:15:34.88:0,35,258	1/1:7,24:31:79.70:773,80,0	1/1:6,25:31:48.55:616,49,0	1/1:6,29:35:51.91:708,52,0	1/1:0,5:5:12.02:122,12,0
chr10	8820856	.	ATCTCTCTCTC	A	7024.24	PASS	AC=42;AF=0.840;AN=50;BaseQRankSum=5.696;DP=468;FS=9.954;HRun=0;HaplotypeScore=133.5748;InbreedingCoeff=0.5059;MQ=76.05;MQ0=14;MQRankSum=-6.317;QD=22.59;ReadPosRankSum=4.652;VQSLOD=3.3602;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,22:23:6.02:178,6,0	./.	0/0:52,0:28:75.94:0,76,2836	0/0:50,0:31:54.29:0,54,2729	0/0:3,16:18:0.47:0,0,1	1/1:2,10:12:3.01:90,3,0	1/1:2,11:13:6.02:179,6,0	1/1:3,17:20:51.01:1068,51,0	1/1:16,0:16:6.02:168,6,0	1/1:11,0:11:19.62:593,20,0	./.	1/1:12,2:14:15.05:415,15,0	1/1:8,1:9:9.03:249,9,0	1/1:16,0:16:3.01:83,3,0	1/1:16,0:16:6.02:166,6,0	1/1:20,0:20:12.04:333,12,0	1/1:20,0:20:9.03:249,9,0	1/1:2,10:13:15.02:379,15,0	1/1:19,0:18:42.07:1099,42,0	1/1:10,3:13:3.01:83,3,0	./.	1/1:2,11:13:3.01:85,3,0	0/0:0,10:10:0.78:0,1,1	1/1:1,17:18:5.29:197,5,0	1/1:6,1:7:6.02:166,6,0	1/1:0,8:8:21.05:562,21,0	1/1:22,0:22:15.05:415,15,0	1/1:6,2:8:9.03:270,9,0
chr10	8820857	.	TCTCTCTCTCTCACACACACACACA	T	10203.41	PASS	AB=0.533;AC=41;AF=0.820;AN=50;BaseQRankSum=5.265;DP=463;FS=8.356;HRun=0;HaplotypeScore=184.9925;InbreedingCoeff=0.4294;MQ=75.37;MQ0=14;MQRankSum=-6.123;QD=33.02;ReadPosRankSum=5.061;VQSLOD=2.9432;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:23:6.02:178,6,0	./.	0/0:51,0:27:77.08:0,77,2846	0/0:50,0:31:54.29:0,54,2741	0/0:18,0:17:0:0,0,0	1/1:12,0:12:3.01:90,3,0	1/1:13,0:13:6.02:179,6,0	1/1:20,0:20:51.01:1068,51,0	0/1:2,0:16:51.91:95,0,52	1/1:0,11:11:20.69:711,21,0	./.	1/1:3,10:13:15.05:995,15,0	1/1:1,7:9:9.03:578,9,0	1/1:1,15:16:3.01:199,3,0	1/1:1,15:16:6.02:398,6,0	1/1:1,19:20:12.04:796,12,0	1/1:0,20:20:9.03:597,9,0	1/1:12,0:12:15.02:360,15,0	1/1:4,15:18:39.95:1192,40,0	1/1:7,0:13:3.01:180,3,0	./.	1/1:13,0:13:3.01:85,3,0	0/0:10,0:10:0.28:0,0,1	1/1:18,0:18:5.13:197,5,0	1/1:1,5:7:6.02:380,6,0	1/1:8,0:8:20.81:562,21,0	1/1:0,22:22:15.05:996,15,0	1/1:2,0:8:9.03:367,9,0
chr10	8821339	.	GA	G	5004.47	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=12.657;DP=738;FS=4.803;HRun=2;HaplotypeScore=70.3477;InbreedingCoeff=0.9981;MQ=83.15;MQ0=0;MQRankSum=-2.081;QD=35.24;ReadPosRankSum=3.058;VQSLOD=5.4591;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,102,1506	0/0:13,0:13:39.13:0,39,584	0/0:21,0:21:62.95:0,63,815	0/0:20,0:21:57.82:0,58,716	0/0:41,0:41:99:0,120,1764	0/0:36,0:36:99:0,108,1616	0/0:32,0:32:93.31:0,93,1374	0/0:30,0:30:90.30:0,90,1332	0/0:18,0:18:54.18:0,54,808	1/1:0,38:38:99:1422,111,0	1/1:0,21:21:60.20:779,60,0	0/0:20,0:20:60.20:0,60,899	0/0:26,0:26:78.24:0,78,1130	0/0:39,0:39:99:0,117,1751	1/1:0,32:32:81.26:1052,81,0	0/0:27,0:27:81.26:0,81,1195	0/0:19,0:19:54.18:0,54,809	0/0:24,0:24:66.22:0,66,988	0/0:22,0:22:66.21:0,66,970	0/0:27,0:27:75.24:0,75,1085	0/0:21,0:21:60.20:0,60,898	0/0:26,0:26:75.24:0,75,1104	1/1:0,23:23:57.19:739,57,0	1/1:0,28:28:78.25:1013,78,0	0/0:30,0:30:90.29:0,90,1328	0/0:20,0:20:60.20:0,60,900	0/0:42,0:42:99:0,126,1806	0/0:6,0:6:18.06:0,18,270
chr10	8822959	.	T	TGATGTTA	1812.19	PASS	AB=0.957;AC=4;AF=0.071;AN=56;BaseQRankSum=-4.028;DP=645;FS=18.662;HRun=0;HaplotypeScore=138.8653;InbreedingCoeff=0.4612;MQ=84.43;MQ0=0;MQRankSum=-6.935;QD=27.46;ReadPosRankSum=-0.069;VQSLOD=2.3033;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:42.14:0,42,1132	0/0:10,0:10:30.10:0,30,784	0/0:20,0:20:51.16:0,51,1207	0/0:19,0:20:50.75:0,51,1158	0/0:32,0:32:87.28:0,87,2284	0/0:43,0:43:99:0,126,3283	0/0:20,0:20:60.21:0,60,1542	0/0:35,0:35:99:0,99,2464	1/1:3,15:21:45.15:1812,45,0	0/1:24,1:25:50.40:50,0,1739	0/0:28,0:28:81.19:0,81,2090	0/0:28,0:28:81.28:0,81,2184	0/0:12,0:12:36.12:0,36,937	0/0:16,0:16:48.15:0,48,1178	0/0:27,0:27:81.28:0,81,2119	0/1:19,1:20:65.33:65,0,1249	0/0:19,0:19:57.20:0,57,1482	0/0:21,0:21:57.18:0,57,1480	0/0:14,0:14:42.14:0,42,1106	0/0:27,0:27:81.28:0,81,2117	0/0:37,0:37:99:0,108,2706	0/0:17,0:17:51.16:0,51,1319	0/0:27,0:27:81.28:0,81,2105	0/0:16,0:16:48.15:0,48,1237	0/0:30,0:30:81.28:0,81,2153	0/0:25,0:25:69.24:0,69,1834	0/0:29,0:27:87.28:0,87,2289	0/0:12,0:12:30.06:0,30,748
chr10	8823704	.	CCCCCCCCCA	C	28754.13	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-0.404;DP=612;FS=26.145;HRun=0;HaplotypeScore=194.1129;InbreedingCoeff=0.9505;MQ=53.86;MQ0=1;MQRankSum=-6.487;QD=48.82;ReadPosRankSum=4.611;VQSLOD=3.0840;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,46:48:81.69:2115,82,0	1/1:1,10:11:20.89:600,21,0	0/0:9,0:7:14.72:0,15,478	0/0:14,0:13:28.88:0,29,911	1/1:1,21:22:30.01:725,30,0	1/1:4,25:29:48.15:1317,48,0	1/1:2,24:26:39.12:1015,39,0	1/1:2,27:29:74.48:1751,74,0	1/1:0,20:20:36.12:1029,36,0	1/1:0,22:22:50.88:1397,51,0	1/1:0,15:15:33.11:840,33,0	1/1:0,19:19:54.19:1542,54,0	1/1:0,21:22:42.62:1170,43,0	1/1:1,24:25:39.13:1113,39,0	1/1:2,28:30:57.18:1628,57,0	1/1:0,17:17:39.13:1113,39,0	1/1:0,24:24:33.11:905,33,0	1/1:1,15:16:24.07:686,24,0	1/1:1,21:22:60.07:1305,60,0	1/1:1,28:29:56.87:1081,57,0	1/1:1,22:23:15.48:363,15,0	1/1:1,18:19:33.11:893,33,0	1/1:2,17:19:32.94:911,33,0	1/1:0,25:25:30.57:828,31,0	1/1:0,22:22:45.15:1235,45,0	1/1:1,22:23:63.13:1481,63,0	1/1:1,26:27:51.06:1456,51,0	1/1:0,5:5:9.03:257,9,0
chr10	8823707	.	CCCCCCACCA	C	22007.16	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=1.115;DP=592;FS=18.083;HRun=0;HaplotypeScore=212.5707;InbreedingCoeff=0.9498;MQ=49.87;MQ0=1;MQRankSum=-7.561;QD=38.47;ReadPosRankSum=6.793;VQSLOD=2.7368;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:46,0:46:66.71:1618,67,0	1/1:10,0:10:20.74:472,21,0	0/0:8,0:6:15.05:0,15,518	0/0:12,0:11:29.69:0,30,792	1/1:21,1:22:27.07:574,27,0	1/1:25,1:26:48.10:1049,48,0	1/1:24,0:24:39:777,39,0	1/1:27,0:27:65.83:1216,66,0	1/1:20,0:20:36.12:811,36,0	1/1:22,0:22:29.70:1049,30,0	1/1:15,0:15:32.96:646,33,0	1/1:19,0:19:54.19:1238,54,0	1/1:23,0:23:43.86:934,44,0	1/1:24,0:24:39.13:895,39,0	1/1:28,0:28:57.20:1288,57,0	1/1:17,0:17:39.13:877,39,0	1/1:24,0:24:33.11:700,33,0	1/1:15,0:15:24.08:518,24,0	1/1:21,0:21:35.61:859,36,0	1/1:28,1:29:26.79:735,27,0	1/1:22,1:23:15.35:285,15,0	1/1:18,0:18:33.05:699,33,0	1/1:17,2:19:32.77:758,33,0	1/1:25,0:25:30.57:657,31,0	1/1:22,0:22:45.09:964,45,0	1/1:22,0:22:52.68:1041,53,0	1/1:26,0:26:50.80:1149,51,0	1/1:5,0:5:9.03:199,9,0
chr10	8825364	.	TTAAC	T	3233.06	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=11.183;DP=633;FS=1.609;HRun=0;HaplotypeScore=103.7051;InbreedingCoeff=0.9884;MQ=85.97;MQ0=0;MQRankSum=-1.860;QD=35.92;ReadPosRankSum=1.309;VQSLOD=3.3870;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:81.22:0,81,1881	0/0:9,0:9:21.07:0,21,539	0/0:24,0:24:65.73:0,66,1308	0/0:18,0:18:30.94:0,31,627	0/0:16,0:16:42.12:0,42,1005	0/0:17,0:17:45.14:0,45,1060	0/0:22,0:22:60.21:0,60,1538	0/0:37,0:37:78.24:0,78,1827	0/0:28,0:28:81.23:0,81,1878	1/1:1,18:19:54.18:955,54,0	1/1:3,15:18:36.04:562,36,0	0/0:26,0:26:60.19:0,60,1476	0/0:34,0:34:96.27:0,96,2229	0/0:25,0:25:54.19:0,54,1373	1/1:5,23:28:60.20:1062,60,0	0/0:35,0:35:96.31:0,96,2440	0/0:30,0:30:90.29:0,90,2194	0/0:7,0:7:21.07:0,21,514	0/0:19,0:19:39.13:0,39,978	0/0:23,0:23:60.17:0,60,1451	0/0:33,0:33:90.25:0,90,2021	0/0:15,0:15:39.13:0,39,988	1/1:2,10:12:18.02:289,18,0	1/1:1,12:13:30.10:539,30,0	0/0:17,0:17:42.13:0,42,1038	0/0:28,1:29:24.33:0,24,1871	0/0:43,0:42:99:0,114,2903	0/0:9,0:9:12.04:0,12,312
chr10	8825765	.	C	CA	25971.48	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=-6.939;DP=873;FS=4.622;HRun=1;HaplotypeScore=90.7543;InbreedingCoeff=0.9994;MQ=93.08;MQ0=0;MQRankSum=-7.636;QD=40.45;ReadPosRankSum=5.756;VQSLOD=4.9797;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,59:59:99:2473,166,0	1/1:1,8:9:24.05:336,24,0	0/0:42,0:42:99:0,117,1494	0/0:32,0:32:90.17:0,90,1091	1/1:1,34:35:99:1457,99,0	1/1:0,31:31:90.30:1348,90,0	1/1:0,21:21:48.16:719,48,0	1/1:2,37:38:99:1644,111,0	1/1:0,29:29:84.28:1259,84,0	0/0:35,0:35:99:0,102,1296	0/0:25,0:25:72.23:0,72,935	1/1:0,38:38:99:1663,111,0	1/1:1,28:29:78.26:1168,78,0	1/1:0,35:35:93.31:1392,93,0	0/0:37,0:37:99:0,111,1409	1/1:1,39:40:99:1484,99,0	1/1:2,35:37:90.30:1349,90,0	1/1:1,20:21:57.19:854,57,0	1/1:1,19:20:57.18:831,57,0	1/1:1,38:39:99:1493,108,0	1/1:0,39:39:99:1574,105,0	1/1:0,22:22:63.21:944,63,0	0/0:24,0:24:69.19:0,69,878	0/0:36,0:36:99:0,99,1266	1/1:0,30:30:84.28:1259,84,0	1/1:4,33:37:30.69:1425,31,0	1/1:0,22:22:60.20:895,60,0	1/1:0,9:9:27.09:405,27,0
chr10	8826439	.	T	TTCTCTCTC	8960.15	PASS	AB=1.000;AC=53;AF=0.981;AN=54;BaseQRankSum=-1.066;DP=734;FS=0.000;HRun=0;HaplotypeScore=240.9538;InbreedingCoeff=0.1112;MQ=57.25;MQ0=9;MQRankSum=0.107;QD=12.62;ReadPosRankSum=1.252;VQSLOD=3.6981;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:44,0:44:23.23:700,23,0	1/1:6,0:6:12.04:370,12,0	./.	0/1:34,0:13:0:1,0,0	1/1:26,0:26:20.75:534,21,0	1/1:29,0:29:12.01:312,12,0	1/1:33,0:33:3.90:100,4,0	1/1:46,0:46:16.13:250,16,0	1/1:32,0:31:23.76:631,24,0	1/1:40,0:38:51.23:1189,51,0	1/1:19,0:19:5.70:121,6,0	1/1:34,0:33:8.70:290,9,0	1/1:24,0:22:24.08:489,24,0	1/1:17,8:30:6.02:245,6,0	1/1:29,0:34:8.30:277,8,0	1/1:23,0:23:15.04:277,15,0	1/1:20,0:20:17.88:556,18,0	1/1:14,0:14:15.05:298,15,0	1/1:23,0:23:25.30:567,25,0	1/1:18,0:17:6.02:136,6,0	1/1:32,0:29:6:169,6,0	1/1:23,0:23:6.01:117,6,0	1/1:22,0:22:8.93:189,9,0	1/1:21,0:21:8.51:238,9,0	1/1:27,0:27:11.64:214,12,0	1/1:22,0:22:23.32:489,23,0	1/1:21,0:20:6.02:162,6,0	1/1:13,0:12:3.01:40,3,0
chr10	8826618	.	A	AT	768.53	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-3.219;DP=637;FS=0.782;HRun=5;HaplotypeScore=62.4593;InbreedingCoeff=0.9045;MQ=74.27;MQ0=0;MQRankSum=0.076;QD=32.02;ReadPosRankSum=-0.041;VQSLOD=4.0641;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:39:99:0,105,1112	0/0:13,0:13:36.09:0,36,387	0/0:13,0:13:23.99:0,24,248	0/0:11,0:11:6.09:0,6,176	0/0:27,0:27:75.17:0,75,798	0/0:21,0:21:60.12:0,60,633	0/0:33,0:33:90.13:0,90,918	0/0:32,0:32:81.18:0,81,859	1/1:1,23:24:66.21:863,66,0	0/0:43,0:43:99:0,123,1311	0/0:16,0:16:41.89:0,42,418	0/0:17,0:17:48.12:0,48,515	0/0:24,0:23:63.15:0,63,670	0/0:18,0:18:48.12:0,48,516	0/0:27,0:27:75.17:0,75,797	0/0:23,0:23:69.14:0,69,718	0/0:23,0:23:60.15:0,60,644	0/0:13,0:13:36.08:0,36,380	0/0:19,0:19:51.11:0,51,540	0/0:26,0:26:75.19:0,75,806	0/0:25,0:25:69.15:0,69,731	0/0:23,0:23:63.62:0,64,671	0/0:16,0:16:48.12:0,48,516	0/0:25,0:25:69.10:0,69,706	0/0:25,0:25:75.17:0,75,792	0/0:28,0:28:81.20:0,81,865	0/0:18,0:18:54.14:0,54,580	0/0:14,0:14:42.03:0,42,427
chr10	8827331	.	AT	A	12728.35	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=11.121;DP=724;FS=3.037;HRun=8;HaplotypeScore=77.4550;InbreedingCoeff=0.9976;MQ=82.11;MQ0=0;MQRankSum=-4.018;QD=25.41;ReadPosRankSum=2.799;VQSLOD=5.7462;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,22:25:57.09:550,57,0	1/1:1,7:8:21.03:203,21,0	0/0:24,0:24:63.15:0,63,706	0/0:20,0:20:45.05:0,45,504	1/1:2,32:34:87.13:840,87,0	1/1:3,32:35:93.15:898,93,0	1/1:2,20:22:51.08:493,51,0	1/1:4,26:30:78.12:753,78,0	0/0:22,0:22:57.17:0,57,689	0/0:39,0:39:76.36:0,76,1179	0/0:30,0:30:78.20:0,78,908	1/1:1,28:29:84.13:811,84,0	1/1:2,34:36:99:985,102,0	1/1:0,22:22:63.10:608,63,0	0/0:39,0:39:99:0,114,1377	1/1:1,21:22:23.85:514,24,0	1/1:1,31:32:87.14:840,87,0	1/1:0,21:21:60.05:570,60,0	1/1:4,23:27:69.06:648,69,0	1/1:1,27:28:75.11:724,75,0	1/1:0,14:14:42.07:406,42,0	1/1:3,26:29:75.12:724,75,0	0/0:23,0:23:63.19:0,63,760	0/0:26,0:26:72.22:0,72,870	1/1:2,22:24:57.09:550,57,0	1/1:1,25:26:41.87:682,42,0	1/1:3,28:31:78.12:753,78,0	1/1:0,6:6:18.03:174,18,0
chr10	8827673	.	GGT	G	579.55	PASS	AB=0.958;AC=19;AF=0.365;AN=52;BaseQRankSum=3.836;DP=697;FS=2.176;HRun=0;HaplotypeScore=102.2669;InbreedingCoeff=-0.4496;MQ=60.03;MQ0=14;MQRankSum=-0.657;QD=1.29;ReadPosRankSum=-1.321;VQSLOD=1.8967;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:34,0:34:57.56:58,0,164	0/0:9,0:10:0.89:0,1,144	./.	0/0:35,0:23:0:0,0,0	0/1:25,0:24:42.69:43,0,135	0/1:24,4:27:85.52:86,0,221	0/1:28,0:28:28.35:28,0,184	./.	0/0:15,0:15:8.90:0,9,60	0/0:17,0:15:2.81:0,3,10	0/0:12,0:10:3.40:0,3,18	0/0:20,0:20:2.25:0,2,154	0/1:28,1:29:8.47:8,0,253	0/1:28,0:27:7.65:8,0,271	0/1:20,0:20:7.29:44,0,7	0/1:25,3:28:25.62:26,0,168	0/1:28,3:33:99:118,0,365	0/1:32,2:35:74.98:75,0,198	0/1:18,0:18:0.54:52,0,1	0/1:22,0:24:15.62:16,0,133	0/0:38,7:44:29.72:0,30,329	0/1:21,2:22:17.22:17,0,247	1/1:18,0:18:2.60:12,3,0	0/0:41,0:39:14.09:0,14,110	0/1:20,4:23:47.39:47,0,130	0/1:25,0:23:43.14:43,0,78	0/1:20,0:20:14.35:14,0,166	0/1:9,0:9:22.66:23,0,56
chr10	8827711	.	TGTGTGTGG	T	1643.72	PASS	AB=1.000;AC=12;AF=0.214;AN=56;BaseQRankSum=2.124;DP=701;FS=1.575;HRun=0;HaplotypeScore=160.8272;InbreedingCoeff=0.7191;MQ=54.69;MQ0=49;MQRankSum=-0.286;QD=7.47;ReadPosRankSum=-5.410;VQSLOD=0.9458;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:42:87.65:0,88,1243	0/0:5,0:5:14.78:0,15,435	0/1:44,0:11:48.74:49,0,108	0/1:50,0:19:26.38:26,0,127	0/0:17,0:15:42.07:0,42,864	0/0:30,0:29:57.43:0,57,1204	0/0:25,0:22:41.35:0,41,850	0/0:22,0:21:35.36:0,35,406	0/0:13,0:12:9.03:0,9,298	1/1:27,0:23:52.14:394,52,0	1/1:15,0:12:21:238,21,0	0/0:21,0:19:54:0,54,808	0/0:20,0:18:47.44:0,47,1085	0/0:17,0:17:48.10:0,48,1037	1/1:3,17:20:14.75:403,15,0	0/0:24,0:22:43.29:0,43,749	0/0:37,0:36:89.37:0,89,1850	0/0:26,0:24:14.59:0,15,1094	0/0:12,0:11:16.44:0,16,309	0/0:21,0:21:39.06:0,39,856	0/0:49,0:43:66.35:0,66,1152	0/0:23,0:20:44.72:0,45,954	1/1:5,13:17:2.77:81,3,0	1/1:44,2:44:26.35:626,26,0	0/0:20,0:19:14.90:0,15,665	0/0:27,0:24:49:0,49,905	0/0:18,0:18:25.92:0,26,786	0/0:9,0:9:23.72:0,24,421
chr10	8828461	.	CTT	C	8860.52	PASS	AB=0.618;AC=42;AF=0.750;AN=56;BaseQRankSum=6.474;DP=620;FS=3.411;HRun=14;HaplotypeScore=119.5280;InbreedingCoeff=0.7896;MQ=66.79;MQ0=0;MQRankSum=-1.727;QD=17.27;ReadPosRankSum=3.046;VQSLOD=4.0225;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,21:27:54.89:501,55,0	1/1:2,8:10:22.23:197,22,0	0/0:17,0:14:21.52:0,22,212	0/0:13,0:10:5.82:0,6,73	1/1:12,18:33:65.46:557,65,0	1/1:4,21:27:63.73:554,64,0	1/1:5,15:22:41.73:372,42,0	1/1:11,23:35:74.72:670,75,0	0/0:6,0:20:27.32:0,27,94	0/1:8,2:22:25.66:26,0,111	0/0:6,1:20:37.25:0,37,142	1/1:4,13:18:35.74:317,36,0	1/1:6,19:25:50.96:471,51,0	1/1:12,7:19:22.13:197,22,0	0/0:8,1:26:6.87:0,7,121	1/1:5,16:22:47.25:406,47,0	1/1:2,17:19:36:332,36,0	1/1:3,19:22:48.01:443,48,0	1/1:8,17:27:56.37:494,56,0	1/1:7,18:26:47.56:427,48,0	1/1:6,9:15:13.40:136,13,0	1/1:2,23:27:65.08:567,65,0	0/1:6,1:15:4.30:4,0,61	0/0:2,0:11:17.47:0,17,60	1/1:6,24:31:72.74:649,73,0	1/1:6,35:42:99:958,107,0	1/1:8,15:23:44.95:416,45,0	1/1:0,6:6:18.02:166,18,0
chr10	8831188	.	AGTATGTAT	A	11569.31	PASS	AB=0.620;AC=39;AF=0.696;AN=56;BaseQRankSum=14.954;DP=868;FS=0.830;HRun=0;HaplotypeScore=299.7383;InbreedingCoeff=0.7400;MQ=62.02;MQ0=1;MQRankSum=-11.542;QD=18.97;ReadPosRankSum=-0.951;VQSLOD=3.3770;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,20:28:5.81:156,6,0	1/1:0,8:8:5.91:137,6,0	0/0:26,0:23:39.13:0,39,1059	0/0:33,0:27:36.12:0,36,1135	1/1:10,32:42:11.93:313,12,0	1/1:7,22:29:21.07:546,21,0	1/1:9,17:26:12.98:314,13,0	1/1:12,21:33:63.16:1198,63,0	1/1:6,26:32:27.09:701,27,0	0/0:60,0:60:99:0,157,5319	0/0:23,0:23:57.18:0,57,2147	1/1:10,28:38:27.09:662,27,0	1/1:5,37:42:29.84:780,30,0	1/1:7,36:43:30.10:779,30,0	0/0:51,0:51:99:0,105,3782	1/1:4,29:33:38.18:1003,38,0	0/1:6,15:21:0.51:282,0,1	0/1:10,10:20:51.07:219,0,51	1/1:3,7:10:20.98:378,21,0	1/1:9,22:31:21.07:545,21,0	0/1:10,18:28:0:0,0,0	1/1:8,29:37:5.70:156,6,0	0/0:35,0:36:84.23:0,84,3123	0/0:29,0:29:63.19:0,63,2398	1/1:10,13:23:6.02:156,6,0	1/1:11,28:39:84.27:1967,84,0	1/1:12,29:41:48.16:1198,48,0	1/1:0,6:6:3.01:78,3,0
chr10	8835729	.	CA	C	13476.27	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=2.751;DP=707;FS=2.395;HRun=8;HaplotypeScore=93.7399;InbreedingCoeff=0.9903;MQ=82.17;MQ0=0;MQRankSum=-5.161;QD=25.52;ReadPosRankSum=3.631;VQSLOD=5.2645;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,46:49:99:1275,132,0	1/1:1,15:16:45.07:435,45,0	0/0:21,0:21:50.11:0,50,496	0/0:20,0:20:40.98:0,41,386	1/1:3,25:28:66.09:637,66,0	1/1:3,25:28:69.11:666,69,0	1/1:0,25:25:69.11:666,69,0	1/1:7,39:46:99:1112,117,0	0/0:18,0:18:45.14:0,45,543	0/0:38,0:38:99:0,105,1260	0/0:22,0:23:69.08:0,69,809	1/1:5,26:31:72.11:695,72,0	1/1:5,20:26:57.08:550,57,0	1/1:1,22:23:63.10:608,63,0	0/0:23,0:23:66.19:0,66,786	1/1:3,35:38:99:1035,108,0	1/1:0,17:17:48.08:464,48,0	1/1:1,14:15:39.06:377,39,0	1/1:2,31:33:92.82:878,93,0	1/1:2,29:31:84.13:811,84,0	1/1:0,20:20:57.09:551,57,0	1/1:1,15:16:45.07:434,45,0	0/0:20,0:20:51.16:0,51,615	0/0:16,0:16:48.15:0,48,580	1/1:1,25:26:75.12:724,75,0	1/1:3,27:30:47.90:746,48,0	1/1:2,25:27:75.12:724,75,0	1/1:0,3:3:9.01:87,9,0
chr10	8835852	.	AG	A	4651.72	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-8.262;DP=729;FS=12.788;HRun=1;HaplotypeScore=105.7794;InbreedingCoeff=0.9954;MQ=86.50;MQ0=0;MQRankSum=-1.454;QD=39.76;ReadPosRankSum=1.903;VQSLOD=3.7250;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,157,2487	0/0:16,0:16:48.15:0,48,741	0/0:30,0:30:90.25:0,90,1350	0/0:20,0:20:59.88:0,60,865	0/0:21,0:21:62.87:0,63,938	0/0:22,0:22:66.17:0,66,983	0/0:24,0:24:72.25:0,72,1151	0/0:34,0:34:99:0,99,1561	0/0:20,0:20:60.20:0,60,951	1/1:0,32:32:96.26:1300,96,0	1/1:0,19:19:57.10:751,57,0	0/0:35,0:35:99:0,105,1626	0/0:39,0:39:99:0,117,1840	0/0:37,0:37:99:0,111,1771	1/1:0,28:28:78.26:1090,78,0	0/0:44,0:44:99:0,132,2086	0/0:23,0:23:69.24:0,69,1097	0/0:5,0:5:15.05:0,15,229	0/0:22,0:22:66.23:0,66,1054	0/0:21,0:21:63.19:0,63,960	0/0:38,0:38:99:0,114,1783	0/0:21,0:21:63.20:0,63,983	1/1:0,20:20:57.19:797,57,0	1/1:0,18:18:51.17:713,51,0	0/0:24,0:24:72.25:0,72,1148	0/0:29,1:30:48.33:0,48,1325	0/0:27,0:27:81.26:0,81,1269	0/0:7,0:7:21.03:0,21,287
chr10	8840444	.	A	AT	2946.34	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=-12.190;DP=518;FS=5.483;HRun=7;HaplotypeScore=46.7602;InbreedingCoeff=0.8719;MQ=70.95;MQ0=0;MQRankSum=-0.014;QD=27.28;ReadPosRankSum=3.197;VQSLOD=4.2704;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:42.07:0,42,405	0/0:7,0:7:18.03:0,18,174	0/0:9,0:10:19.15:0,19,158	0/1:8,0:6:19.50:24,0,20	0/0:23,0:23:66.09:0,66,631	0/0:22,0:22:54.07:0,54,516	0/0:14,0:14:36.04:0,36,341	0/0:35,0:35:96.13:0,96,919	0/0:13,0:13:39.03:0,39,365	1/1:3,23:26:69.21:833,69,0	1/1:3,19:22:57.13:672,57,0	0/0:21,0:21:57.09:0,57,550	0/0:28,0:28:81.13:0,81,782	0/0:16,0:16:42.06:0,42,406	1/1:3,17:20:45.14:544,45,0	0/0:23,0:23:66.08:0,66,627	0/0:21,0:21:57.08:0,57,545	0/0:11,0:11:27.04:0,27,261	0/0:10,0:10:21.03:0,21,203	0/0:31,0:31:81.12:0,81,777	0/0:11,0:11:27.04:0,27,261	0/0:23,0:23:57.08:0,57,550	1/1:1,24:25:66.20:797,66,0	1/1:0,7:7:21.06:254,21,0	0/0:17,0:17:45.07:0,45,435	0/0:28,0:28:81.13:0,81,782	0/0:23,0:23:69.10:0,69,661	0/0:7,0:7:9.01:0,9,87
chr10	8841288	.	CT	C	19347.99	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-2.108;DP=610;FS=14.786;HRun=3;HaplotypeScore=65.1492;InbreedingCoeff=0.9819;MQ=84.53;MQ0=0;MQRankSum=-9.361;QD=33.94;ReadPosRankSum=6.303;VQSLOD=3.4708;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,54:54:99:1897,153,0	1/1:0,8:8:24.08:298,24,0	0/0:22,0:22:60.12:0,60,766	0/0:18,0:18:45.14:0,45,623	1/1:1,14:15:39.12:483,39,0	1/1:0,23:23:66.21:818,66,0	1/1:0,28:28:78.25:967,78,0	1/1:4,32:36:96.29:1178,96,0	1/1:1,21:22:57.18:707,57,0	1/1:2,24:26:72.22:880,72,0	1/1:0,9:9:24.08:298,24,0	1/1:2,26:28:78.24:967,78,0	1/1:1,22:23:63.20:781,63,0	1/1:1,20:21:60.19:743,60,0	1/1:1,23:24:69.22:855,69,0	1/1:2,21:23:57.18:707,57,0	1/1:1,27:28:81.25:1004,81,0	1/1:0,10:10:30.09:372,30,0	1/1:0,22:22:66.21:815,66,0	1/1:0,12:12:33.10:409,33,0	1/1:1,36:37:96.30:1190,96,0	1/1:0,15:15:45.14:558,45,0	1/1:0,14:14:42.13:521,42,0	1/1:1,27:28:66.21:818,66,0	1/1:2,20:22:57.18:707,57,0	1/1:0,19:19:54.17:670,54,0	1/1:0,18:18:45.14:558,45,0	1/1:0,5:5:12.04:149,12,0
chr10	8841486	.	CCA	C	11124.06	PASS	AB=0.927;AC=46;AF=0.821;AN=56;BaseQRankSum=-6.487;DP=507;FS=0.000;HRun=0;HaplotypeScore=84.5466;InbreedingCoeff=0.2482;MQ=79.66;MQ0=4;MQRankSum=-1.479;QD=25.46;ReadPosRankSum=7.149;VQSLOD=5.0771;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,23:25:53.39:744,53,0	1/1:0,5:5:8.99:106,9,0	0/0:44,0:29:29.59:0,30,427	0/0:26,0:19:9.64:0,10,175	1/1:0,28:29:83.62:964,84,0	1/1:1,18:19:41.94:596,42,0	1/1:0,15:15:27.09:390,27,0	1/1:0,12:12:35.06:400,35,0	1/1:1,17:18:42.14:606,42,0	0/1:23,0:23:48.96:49,0,89	0/1:17,0:17:46.13:56,0,46	0/1:2,6:9:11.38:123,0,11	1/1:0,17:17:36.12:519,36,0	1/1:1,15:16:32.43:512,32,0	0/1:15,0:15:38.45:38,0,51	1/1:0,15:15:39.13:563,39,0	1/1:0,18:19:41.81:574,42,0	1/1:0,13:15:42.03:541,42,0	1/1:1,13:15:30.47:421,30,0	1/1:0,21:20:50.55:552,51,0	1/1:0,9:9:21.07:303,21,0	1/1:0,16:17:42.07:562,42,0	0/1:14,0:14:26.09:43,0,26	0/1:15,0:15:33.74:68,0,34	1/1:2,18:20:28.45:508,28,0	1/1:2,18:20:52.54:671,53,0	1/1:0,22:24:57.15:782,57,0	1/1:0,13:12:30.10:433,30,0
chr10	8841487	.	CAA	C	5743.87	PASS	AB=1.000;AC=50;AF=0.893;AN=56;BaseQRankSum=0.169;DP=503;FS=10.308;HRun=10;HaplotypeScore=103.1702;InbreedingCoeff=0.4902;MQ=79.86;MQ0=4;MQRankSum=-6.611;QD=13.27;ReadPosRankSum=7.961;VQSLOD=1.3906;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:23,1:24:52.84:337,53,0	1/1:5,0:5:6.30:36,6,0	0/0:43,0:29:36.76:0,37,390	0/0:26,0:19:7.58:0,8,142	1/1:29,0:29:34.96:324,35,0	1/1:18,0:19:39.81:231,40,0	1/1:15,0:15:26.17:150,26,0	0/1:13,0:13:37.60:101,0,38	1/1:17,0:18:41.05:251,41,0	1/1:5,15:23:47.47:432,47,0	1/1:4,11:16:30.04:322,30,0	1/1:9,0:9:8.40:43,8,0	1/1:17,0:17:35.22:221,35,0	1/1:16,0:16:7.56:189,8,0	1/1:3,10:15:23.99:243,24,0	1/1:15,0:15:37.94:225,38,0	1/1:19,0:19:41.10:264,41,0	1/1:15,0:15:37.95:240,38,0	0/1:15,0:15:8.91:110,0,9	1/1:21,0:20:23.11:160,23,0	1/1:9,0:9:20.58:128,21,0	1/1:17,0:17:38:230,38,0	1/1:2,9:13:23.61:230,24,0	1/1:1,10:13:36.04:377,36,0	1/1:20,0:20:6.89:178,7,0	1/1:19,0:20:3.37:178,3,0	1/1:24,0:24:55.79:352,56,0	1/1:13,0:12:29.53:192,30,0
chr10	8842969	.	AACACAC	A	314.66	PASS	AB=0.706;AC=7;AF=0.140;AN=50;BaseQRankSum=-0.684;DP=400;FS=5.826;HRun=0;HaplotypeScore=107.7233;InbreedingCoeff=0.4274;MQ=49.16;MQ0=23;MQRankSum=-0.839;QD=6.42;ReadPosRankSum=0.565;VQSLOD=1.3272;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:20:6.02:0,6,149	0/0:7,0:10:11.97:0,12,255	./.	./.	0/0:19,0:18:18.06:0,18,457	0/0:13,0:13:4.05:0,4,94	0/0:25,0:24:1.36:0,1,4	0/0:20,0:17:9.03:0,9,181	0/0:9,0:9:5.99:0,6,89	1/1:8,2:10:5.61:121,6,0	./.	0/0:9,0:12:5.63:0,6,140	0/0:14,0:14:3.55:0,4,80	0/0:4,0:4:1.55:0,2,4	0/1:7,3:12:19.82:229,0,20	0/0:9,0:9:6.02:0,6,170	0/0:20,0:20:12.04:0,12,251	0/0:18,0:19:27.09:0,27,720	0/0:11,0:11:26.92:0,27,541	0/0:10,0:10:11.47:0,11,265	0/0:15,0:14:9.03:0,9,263	0/0:9,0:9:14.06:0,14,292	1/1:9,1:10:5.97:57,6,0	1/1:17,0:17:2.91:24,3,0	0/0:22,0:23:11.42:0,11,271	0/0:11,0:11:18.06:0,18,403	0/0:7,0:11:8.05:0,8,127	0/0:8,0:8:15.05:0,15,350
chr10	8843053	.	T	TA	10312.20	PASS	AB=0.842;AC=51;AF=0.944;AN=54;BaseQRankSum=-0.467;DP=324;FS=5.739;HRun=3;HaplotypeScore=96.9431;InbreedingCoeff=0.5104;MQ=49.43;MQ0=1;MQRankSum=-5.307;QD=33.05;ReadPosRankSum=4.165;VQSLOD=4.9848;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,12:13:26.97:329,27,0	1/1:0,10:10:30.10:411,30,0	0/1:13,2:13:9.01:9,0,192	0/0:8,0:9:7.27:0,7,159	1/1:4,14:18:42.10:558,42,0	1/1:3,15:18:45.05:576,45,0	1/1:2,10:12:36.01:473,36,0	1/1:3,10:13:36:455,36,0	1/1:0,4:4:12.04:166,12,0	1/1:1,16:17:45.15:620,45,0	1/1:4,7:11:29.79:338,30,0	1/1:1,10:11:30.10:415,30,0	1/1:1,16:17:48.16:664,48,0	1/1:1,4:5:14.91:160,15,0	1/1:3,4:7:18.01:212,18,0	1/1:2,10:13:36.06:460,36,0	1/1:0,6:6:18.06:249,18,0	1/1:1,8:9:24.06:314,24,0	1/1:4,10:13:36.10:468,36,0	1/1:0,16:16:48.16:664,48,0	1/1:2,2:3:2.92:17,3,0	1/1:2,5:7:21.04:258,21,0	1/1:2,12:14:38.99:492,39,0	1/1:1,4:4:9.03:125,9,0	1/1:4,19:23:66:822,66,0	1/1:3,12:15:38.71:501,39,0	1/1:1,13:14:42.09:558,42,0	./.
chr10	8843060	.	T	TA	9646.37	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=0.849;DP=328;FS=0.000;HRun=5;HaplotypeScore=96.8510;InbreedingCoeff=0.7911;MQ=54.51;MQ0=1;MQRankSum=-7.520;QD=32.48;ReadPosRankSum=5.187;VQSLOD=4.5357;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,11:13:24.08:305,24,0	1/1:2,8:10:24.08:306,24,0	0/0:18,0:15:42.09:0,42,438	0/0:13,0:13:33.05:0,33,342	1/1:3,14:17:39.13:506,39,0	1/1:1,16:17:45.14:581,45,0	1/1:1,10:11:30.10:394,30,0	1/1:5,8:13:27.05:336,27,0	1/1:0,4:4:12.04:158,12,0	1/1:2,15:17:42.14:552,42,0	1/1:2,11:13:33.11:434,33,0	1/1:2,9:11:27.09:354,27,0	1/1:2,16:18:48.16:631,48,0	1/1:0,5:5:15.05:197,15,0	1/1:2,3:5:11.97:136,12,0	1/1:0,11:12:36.12:468,36,0	1/1:0,6:6:18.06:237,18,0	1/1:3,7:10:18.06:232,18,0	1/1:5,11:15:39.09:492,39,0	1/1:0,16:16:48.16:631,48,0	1/1:2,0:2:2.97:20,3,0	1/1:2,4:6:18.06:236,18,0	1/1:3,12:15:39.13:511,39,0	1/1:2,3:4:6.02:79,6,0	1/1:3,20:23:57.19:749,57,0	1/1:4,11:15:32.75:433,33,0	1/1:0,15:15:45.15:591,45,0	1/1:0,2:2:6.02:79,6,0
chr10	8843121	.	CCTTT	C	3493.33	PASS	AB=0.824;AC=28;AF=0.519;AN=54;BaseQRankSum=-1.162;DP=318;FS=5.071;HRun=0;HaplotypeScore=65.3876;InbreedingCoeff=-0.4600;MQ=44.55;MQ0=11;MQRankSum=0.117;QD=14.68;ReadPosRankSum=-6.348;VQSLOD=0.8463;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:9,0:8:99:125,0,212	0/1:3,0:3:49.65:50,0,115	0/0:31,0:4:12.04:0,12,178	0/0:38,0:10:17.32:0,17,246	0/1:20,0:15:99:233,0,187	0/1:8,0:8:16.74:17,0,224	./.	0/1:9,4:12:29.12:240,0,29	1/1:1,3:4:3.01:54,3,0	0/1:14,4:18:99:186,0,500	0/1:8,8:14:99:187,0,232	1/1:2,8:10:8.25:213,8,0	0/1:8,3:11:99:271,0,161	0/1:7,5:11:89.34:291,0,89	0/1:7,5:12:99:164,0,206	0/1:10,6:14:99:252,0,160	1/1:1,3:4:6.02:90,6,0	1/1:3,0:3:6.02:111,6,0	0/1:11,0:11:74.85:75,0,377	0/1:6,4:9:88.89:89,0,184	1/1:3,0:3:9.03:142,9,0	0/1:5,1:6:53.54:57,0,54	0/1:13,0:12:99:169,0,224	0/0:4,3:5:2.96:0,3,19	0/1:9,3:12:27.76:28,0,429	0/1:4,6:10:99:249,0,133	0/1:7,7:14:99:202,0,144	0/0:1,0:1:3.01:0,3,56
chr10	8843125	.	T	TC	2086.26	PASS	AC=46;AF=0.920;AN=50;BaseQRankSum=-0.345;DP=238;FS=18.520;HRun=0;HaplotypeScore=39.8593;InbreedingCoeff=0.4864;MQ=47.14;MQ0=14;MQRankSum=0.511;QD=12.72;ReadPosRankSum=-1.567;VQSLOD=1.6597;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:10:26.78:233,27,0	1/1:1,0:1:2.94:18,3,0	0/0:28,0:2:6.01:0,6,66	0/0:37,0:9:12.53:0,13,141	1/1:9,2:8:14.92:152,15,0	1/1:2,0:2:2.68:11,3,0	./.	1/1:12,1:12:20.63:149,21,0	1/1:5,0:5:3.01:33,3,0	1/1:7,1:8:16.27:142,16,0	1/1:9,0:8:18.04:131,18,0	1/1:10,0:10:12.55:69,13,0	1/1:8,1:9:20.67:183,21,0	1/1:8,0:7:16.75:86,17,0	1/1:7,0:7:10.76:88,11,0	1/1:12,0:10:17.48:111,17,0	1/1:5,0:5:5.81:46,6,0	1/1:5,1:4:5.91:51,6,0	1/1:5,0:5:5.49:24,5,0	1/1:5,0:5:8.91:71,9,0	1/1:5,0:5:14.77:147,15,0	1/1:4,0:4:4.94:22,5,0	1/1:6,3:8:17.13:140,17,0	./.	1/1:4,0:4:2.92:17,3,0	1/1:6,0:6:17.71:197,18,0	1/1:9,0:9:13.13:82,13,0	./.
chr10	8843478	.	T	TAA	33900.08	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-6.379;DP=686;FS=5.182;HRun=1;HaplotypeScore=84.3205;InbreedingCoeff=0.9836;MQ=83.76;MQ0=1;MQRankSum=-10.087;QD=52.64;ReadPosRankSum=5.226;VQSLOD=4.7279;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,35:38:99:1933,102,0	1/1:0,9:9:27.05:484,27,0	0/0:25,0:25:63.21:0,63,926	0/0:17,0:17:45.15:0,45,662	1/1:1,25:26:72.20:1353,72,0	1/1:1,23:24:69.19:1295,69,0	1/1:3,27:30:87.23:1607,87,0	1/1:3,37:40:99:2249,117,0	1/1:1,28:30:78.23:1470,78,0	1/1:2,18:20:60.21:1144,60,0	1/1:1,19:20:57.03:1039,57,0	1/1:0,28:28:84.29:1623,84,0	1/1:3,32:35:96.33:1839,96,0	1/1:3,27:30:78.18:1413,78,0	1/1:0,26:27:78.27:1508,78,0	1/1:0,27:27:78.27:1508,78,0	1/1:2,20:22:57.20:1101,57,0	1/1:1,15:16:48.16:927,48,0	1/1:1,9:10:30.08:504,30,0	1/1:3,26:29:78.10:1301,78,0	1/1:3,26:30:81.23:1527,81,0	1/1:1,17:17:45.11:822,45,0	1/1:0,27:27:75.26:1443,75,0	1/1:0,18:18:48.16:928,48,0	1/1:0,16:16:48.12:889,48,0	1/1:1,44:46:99:2546,135,0	1/1:1,22:23:63.22:1217,63,0	1/1:0,4:4:12.04:232,12,0
chr10	8844121	.	T	TAA	35853.19	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=2.955;DP=816;FS=3.762;HRun=4;HaplotypeScore=134.9394;InbreedingCoeff=0.9998;MQ=80.17;MQ0=3;MQRankSum=-10.632;QD=46.50;ReadPosRankSum=6.335;VQSLOD=3.2823;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,42:46:99:2053,114,0	1/1:1,11:12:33.11:594,33,0	0/0:23,0:23:43.06:0,43,810	0/0:21,0:22:56.35:0,56,702	1/1:2,24:26:72.20:1234,72,0	1/1:1,32:33:93.28:1641,93,0	1/1:2,30:32:80.95:1425,81,0	1/1:6,26:32:84.29:1512,84,0	1/1:3,32:37:90.27:1585,90,0	1/1:2,32:34:93.32:1675,93,0	1/1:2,22:23:63.17:1090,63,0	1/1:4,27:32:75.26:1350,75,0	1/1:0,31:33:90.31:1618,90,0	1/1:1,36:37:99:1911,108,0	1/1:2,38:40:99:1857,105,0	1/1:2,35:37:99:1836,102,0	1/1:2,21:24:63.22:1134,63,0	1/1:2,20:23:57.16:981,57,0	1/1:3,16:19:51.17:909,51,0	1/1:2,35:36:96.33:1728,96,0	1/1:2,35:37:96.24:1661,96,0	1/1:1,19:20:57.11:958,57,0	1/1:3,21:24:63.17:1100,63,0	1/1:2,22:25:54.14:938,54,0	1/1:1,21:22:63.22:1134,63,0	1/1:4,39:44:99:1995,114,0	1/1:3,20:24:66.23:1177,66,0	1/1:2,14:16:42.14:756,42,0
chr10	8844444	.	AACACACACACACACACACACACACACACAC	A	12137.88	PASS	AB=0.762;AC=40;AF=0.769;AN=52;BaseQRankSum=5.995;DP=477;FS=22.980;HRun=0;HaplotypeScore=346.8587;InbreedingCoeff=-0.1410;MQ=52.56;MQ0=26;MQRankSum=-4.163;QD=27.40;ReadPosRankSum=2.178;VQSLOD=1.9058;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:13,7:19:46.57:1019,0,47	1/1:3,2:5:3.01:230,3,0	./.	0/1:22,0:10:0:0,0,0	0/1:13,9:22:99:1010,0,306	1/1:18,5:23:6.02:460,6,0	1/1:14,0:12:9.02:137,9,0	1/1:24,5:28:13.34:207,13,0	1/1:7,0:13:15.05:646,15,0	0/1:16,0:23:99:229,0,944	0/1:11,0:18:99:215,0,323	1/1:8,4:12:2.80:230,3,0	1/1:11,8:19:15.05:1150,15,0	1/1:13,1:16:9.03:484,9,0	0/1:14,0:25:99:300,0,446	1/1:16,5:21:6.02:460,6,0	0/1:8,2:10:99:451,0,116	0/1:8,5:13:99:670,0,790	0/1:11,3:14:99:265,0,336	1/1:16,9:25:14.93:521,15,0	./.	1/1:15,2:16:6.02:460,6,0	0/1:7,0:17:99:301,0,164	0/0:12,0:10:6:0,6,148	1/1:10,9:19:15.05:1150,15,0	1/1:15,5:20:15.03:599,15,0	1/1:17,5:20:12.04:920,12,0	1/1:3,0:2:2.97:20,3,0
chr10	8846112	.	TTCTCTCTCTCTC	T	383.69	PASS	AC=20;AF=0.526;AN=38;BaseQRankSum=-0.222;DP=422;FS=15.276;HRun=0;HaplotypeScore=135.8478;InbreedingCoeff=0.5038;MQ=64.89;MQ0=19;MQRankSum=0.636;QD=3.05;ReadPosRankSum=2.853;VQSLOD=1.4210;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	1/1:7,2:8:2.87:15,3,0	1/1:9,1:10:1.99:6,2,0	1/1:15,0:15:6:108,6,0	0/0:28,0:27:9.61:0,10,62	0/0:17,0:17:6.02:0,6,166	./.	0/0:18,0:16:1.39:0,1,32	0/0:13,0:13:8.89:0,9,61	1/1:5,0:7:2.37:8,2,0	0/0:26,0:26:4.98:0,5,24	1/1:17,0:17:2.92:17,3,0	1/1:12,0:12:8.92:123,9,0	1/1:15,1:16:6.02:92,6,0	1/1:11,0:10:3.01:41,3,0	1/1:16,0:16:5.52:99,6,0	0/0:17,0:16:5.85:0,6,34	./.	1/1:12,0:12:0.47:1,0,0	./.	./.	0/0:12,0:11:0.88:0,1,2	0/0:19,0:18:7.38:0,7,105	0/0:17,0:17:5.93:0,6,54	./.
chr10	8846170	.	T	TGTGTG	3744.41	PASS	AB=0.981;AC=42;AF=0.750;AN=56;BaseQRankSum=7.000;DP=409;FS=0.652;HRun=0;HaplotypeScore=216.4065;InbreedingCoeff=0.0986;MQ=40.90;MQ0=20;MQRankSum=0.001;QD=10.52;ReadPosRankSum=5.523;VQSLOD=2.5063;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:17,1:19:20.02:179,20,0	1/1:8,0:8:14.98:175,15,0	0/0:18,0:12:23.83:0,24,379	0/0:22,0:11:5.35:0,5,269	1/1:15,0:13:5.53:100,6,0	0/1:16,2:17:13.09:134,0,13	1/1:17,0:16:18.79:195,19,0	0/1:25,0:24:80.47:80,0,468	1/1:13,0:14:14.24:169,14,0	0/1:18,0:18:85.07:255,0,85	1/1:11,0:12:20.40:163,20,0	0/0:13,0:12:4.32:0,4,15	1/1:12,0:12:21.02:279,21,0	1/1:19,0:20:22.76:218,23,0	1/1:11,1:12:18.45:186,18,0	1/1:14,0:15:15.49:185,15,0	0/1:12,0:11:26.62:100,0,27	0/1:8,0:7:29.23:53,0,29	0/1:11,0:11:99:141,0,132	1/1:17,0:17:19.23:197,19,0	1/1:8,0:5:3:25,3,0	1/1:14,0:14:9.45:74,9,0	1/1:13,0:12:14.89:115,15,0	1/1:19,0:17:9.23:66,9,0	1/1:6,0:6:8.31:67,8,0	0/1:18,1:17:72.93:326,0,73	0/1:14,0:14:18.91:232,0,19	1/1:6,0:3:3.88:28,4,0
chr10	8846852	.	A	AT	28800.19	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=2.333;DP=763;FS=4.213;HRun=0;HaplotypeScore=134.4231;InbreedingCoeff=0.9701;MQ=85.30;MQ0=0;MQRankSum=-11.793;QD=40.79;ReadPosRankSum=7.328;VQSLOD=3.5873;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:0,37:37:99:1452,99,0	1/1:0,9:9:27.09:399,27,0	0/0:26,0:26:75.16:0,75,962	0/0:31,0:30:74.61:0,75,923	1/1:0,28:28:84.24:1230,84,0	1/1:0,30:29:84.28:1257,84,0	1/1:2,29:31:81.27:1202,81,0	1/1:0,37:37:99:1553,111,0	1/1:0,24:24:69.23:1031,69,0	1/1:1,25:26:75.25:1120,75,0	1/1:1,23:24:66.22:982,66,0	1/1:1,26:27:72.24:1071,72,0	1/1:0,28:28:72.24:1077,72,0	1/1:0,25:25:69.23:1015,69,0	1/1:2,47:49:99:1917,129,0	1/1:3,31:34:96.31:1403,96,0	1/1:1,34:35:90.30:1340,90,0	1/1:2,12:14:30.10:451,30,0	1/1:0,24:24:72.24:1078,72,0	1/1:1,28:29:84.28:1256,84,0	1/1:1,36:38:99:1461,99,0	1/1:1,20:21:54.18:810,54,0	1/1:1,23:24:63.21:943,63,0	1/1:0,27:27:72.24:1070,72,0	1/1:0,24:24:69.23:1047,69,0	1/1:0,26:26:78.26:1167,78,0	1/1:0,32:32:90.30:1334,90,0	1/1:0,3:3:9.03:135,9,0
chr10	8852160	.	T	TGTGTGCGC	31652.05	PASS	AB=0.934;AC=43;AF=0.796;AN=54;BaseQRankSum=-9.270;DP=877;FS=1.618;HRun=0;HaplotypeScore=294.3213;InbreedingCoeff=0.2237;MQ=64.54;MQ0=6;MQRankSum=-3.411;QD=41.92;ReadPosRankSum=2.537;VQSLOD=3.9097;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:20,8:29:17.67:561,18,0	1/1:2,11:13:24.08:1017,24,0	0/0:40,0:29:48.44:0,48,1012	0/0:66,0:48:62.29:0,62,1710	1/1:16,15:31:12.04:508,12,0	1/1:14,11:25:33.11:1128,33,0	0/1:19,17:36:8.50:1268,0,9	1/1:28,18:55:99:2921,108,0	1/1:13,13:28:63.20:2251,63,0	0/1:42,0:42:99:620,0,355	0/1:27,0:27:61.06:179,0,61	1/1:22,16:37:51.15:1647,51,0	1/1:24,11:36:68.80:2233,69,0	1/1:21,20:41:57.16:2116,57,0	0/1:25,0:25:58.54:499,0,59	1/1:18,23:41:69.22:2518,69,0	1/1:13,12:25:33.07:1133,33,0	0/1:10,2:12:9.62:627,0,10	1/1:20,2:19:36.10:1003,36,0	1/1:24,12:36:48.07:1338,48,0	1/1:32,4:35:20.86:334,21,0	1/1:17,17:35:33.04:880,33,0	0/1:19,0:19:30.50:285,0,30	./.	1/1:5,22:28:21.07:889,21,0	1/1:8,30:40:99:3855,108,0	1/1:15,6:22:42.14:1549,42,0	0/1:9,0:9:4.80:294,0,5
chr10	8852170	.	T	TGTGTGTGG	16766.74	PASS	AB=1.000;AC=30;AF=0.556;AN=54;BaseQRankSum=8.275;DP=899;FS=1.110;HRun=0;HaplotypeScore=331.4987;InbreedingCoeff=-0.5051;MQ=50.41;MQ0=10;MQRankSum=-9.063;QD=21.41;ReadPosRankSum=10.581;VQSLOD=2.2914;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:29:40.79:82,0,41	0/1:14,0:13:47.78:583,0,48	0/0:40,0:24:57.04:0,57,1088	0/0:60,0:40:99:0,105,2474	0/1:29,0:29:92.70:280,0,93	0/1:26,0:26:99:483,0,174	0/1:35,0:35:25.59:554,0,26	0/1:53,0:52:99:677,0,1257	0/1:29,0:29:28.48:1233,0,28	1/1:33,11:44:98.23:1904,98,0	1/1:24,3:27:20.98:417,21,0	0/1:42,0:41:99:725,0,250	0/1:41,0:40:99:929,0,298	0/1:44,0:42:9.75:1090,0,10	1/1:14,7:21:42:1024,42,0	0/1:43,0:42:99:1281,0,181	0/1:23,0:23:9.60:551,0,10	1/1:15,0:14:4.49:261,4,0	0/1:27,0:23:99:214,0,431	0/1:35,0:35:99:628,0,165	0/1:47,0:45:23.87:24,0,511	0/1:34,0:33:99:397,0,324	1/1:8,9:17:17.89:617,18,0	./.	0/1:29,0:29:99:540,0,145	0/1:47,0:45:99:1641,0,537	0/1:22,0:22:99:593,0,154	0/1:10,0:9:41.14:41,0,44
chr10	8852171	.	GTA	G	1315.51	PASS	AB=0.983;AC=23;AF=0.426;AN=54;BaseQRankSum=0.090;DP=901;FS=19.935;HRun=0;HaplotypeScore=316.4156;InbreedingCoeff=-0.3578;MQ=49.40;MQ0=11;MQRankSum=2.281;QD=1.97;ReadPosRankSum=-5.167;VQSLOD=0.4844;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:31,0:31:11.05:11,0,153	0/0:15,0:14:30:0,30,316	0/0:41,0:24:56.36:0,56,717	0/0:60,0:40:92.43:0,92,1710	0/0:28,0:28:23.54:0,24,257	0/1:26,0:26:2.79:3,0,500	0/1:35,0:35:13.19:13,0,158	0/1:53,0:52:59.07:59,0,1559	0/1:29,0:29:72.89:73,0,479	1/1:33,10:44:50.26:571,50,0	1/1:24,3:27:6.78:116,7,0	0/1:42,0:42:35.66:36,0,585	0/1:41,0:40:4.80:5,0,810	0/1:44,0:42:47.85:48,0,392	0/1:19,2:21:5.25:134,0,5	0/1:43,0:42:22.20:22,0,723	0/1:24,0:23:10.14:10,0,251	0/1:15,0:14:10.31:98,0,10	0/1:27,0:23:47.87:48,0,656	0/1:35,0:35:48.73:49,0,466	0/1:47,0:45:48.64:49,0,625	0/1:34,0:33:4.62:5,0,509	0/1:12,5:17:9.53:10,0,25	./.	0/0:28,0:28:38.57:0,39,437	0/0:47,0:45:70.59:0,71,1298	0/1:22,0:22:49.58:50,0,386	0/1:10,0:9:68.46:68,0,96
chr10	8852246	.	A	ATG	19921.19	PASS	AB=0.625;AC=41;AF=0.732;AN=56;BaseQRankSum=-15.158;DP=908;FS=1.673;HRun=0;HaplotypeScore=160.9205;InbreedingCoeff=0.8963;MQ=62.79;MQ0=19;MQRankSum=6.036;QD=28.79;ReadPosRankSum=4.612;VQSLOD=5.8484;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,35:42:89.93:1471,90,0	1/1:6,7:12:31.90:464,32,0	0/0:41,0:27:34.71:0,35,382	0/0:49,0:42:74.74:0,75,912	1/1:4,20:23:45.15:716,45,0	1/1:10,27:37:26.03:946,26,0	1/1:10,22:32:56.68:933,57,0	1/1:12,28:41:87.26:1305,87,0	1/1:7,28:34:44.09:1230,44,0	0/0:8,0:40:57.08:0,57,265	0/0:4,0:22:33.82:0,34,153	1/1:13,32:44:29.05:993,29,0	1/1:12,37:48:93.32:1524,93,0	1/1:4,31:34:72.25:1180,72,0	0/0:1,0:27:48.29:0,48,238	1/1:6,32:37:78.27:1279,78,0	1/1:2,18:19:33.11:540,33,0	1/1:2,23:22:48.16:768,48,0	1/1:15,15:27:8.06:581,8,0	1/1:12,21:34:20:848,20,0	1/1:15,43:57:81.28:1318,81,0	1/1:11,21:31:57.19:935,57,0	0/0:2,0:19:35.81:0,36,170	0/0:3,0:18:16.81:0,17,71	0/1:10,15:23:14.19:767,0,14	1/1:19,16:35:64.09:1145,64,0	1/1:7,18:26:36.12:589,36,0	1/1:2,9:10:20.67:388,21,0
chr10	8852337	.	CTCTG	C	4575.02	PASS	AB=0.939;AC=11;AF=0.196;AN=56;BaseQRankSum=10.607;DP=704;FS=4.345;HRun=0;HaplotypeScore=133.4183;InbreedingCoeff=0.8889;MQ=63.87;MQ0=1;MQRankSum=-4.161;QD=30.50;ReadPosRankSum=0.237;VQSLOD=4.8789;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,105,2374	0/0:11,0:11:30.09:0,30,725	0/0:24,0:22:52.86:0,53,1143	0/0:48,0:41:70.41:0,70,1581	0/0:22,0:22:66.23:0,66,1613	0/0:39,0:39:99:0,102,2507	0/0:23,0:23:66.23:0,66,1613	0/0:37,0:37:93.30:0,93,2116	0/0:26,0:26:75.20:0,75,1811	1/1:10,26:36:96.31:1637,96,0	1/1:4,10:14:39.03:566,39,0	0/0:32,0:32:81.28:0,81,1998	0/0:31,0:31:93.25:0,93,2203	0/0:29,0:29:75.25:0,75,1818	1/1:8,20:28:69.24:1216,69,0	0/0:29,0:29:78.27:0,78,1966	0/0:16,0:16:42.14:0,42,1007	0/0:8,0:8:21.07:0,21,522	0/0:25,0:25:64.08:0,64,1403	0/0:25,0:25:66.20:0,66,1492	0/0:16,0:16:42.14:0,42,1022	0/0:19,0:19:57.20:0,57,1474	1/1:6,14:20:42.14:742,42,0	1/1:8,13:21:27:399,27,0	0/0:17,0:17:45.14:0,45,1059	0/1:29,2:31:14.42:14,0,2121	0/0:26,0:26:69.24:0,69,1739	0/0:10,0:10:24.08:0,24,622
chr10	8852372	.	CCTCT	C	999.21	PASS	AB=0.833;AC=37;AF=0.841;AN=44;BaseQRankSum=3.445;DP=639;FS=33.384;HRun=0;HaplotypeScore=128.1440;InbreedingCoeff=0.3313;MQ=55.74;MQ0=20;MQRankSum=0.273;QD=2.65;ReadPosRankSum=4.101;VQSLOD=0.8588;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:39:36.04:0,36,537	./.	./.	0/0:63,0:21:0:0,0,0	1/1:25,0:25:3.01:45,3,0	1/1:25,1:28:6.01:73,6,0	1/1:17,8:26:6.49:93,6,0	./.	1/1:18,0:21:9.01:84,9,0	./.	1/1:7,0:11:3.47:29,3,0	1/1:19,6:26:9.01:115,9,0	1/1:25,3:28:6.02:92,6,0	1/1:22,0:21:2.99:25,3,0	1/1:16,0:20:3.89:30,4,0	1/1:20,2:22:12.03:166,12,0	1/1:13,0:12:6.02:80,6,0	1/1:9,2:13:8.14:118,8,0	1/1:17,0:16:2.99:25,3,0	1/1:18,0:18:3.01:44,3,0	./.	./.	1/1:16,0:21:2.60:10,3,0	0/1:16,0:19:0.02:0,0,0	1/1:14,1:15:3.01:46,3,0	0/0:26,0:25:4.73:0,5,37	1/1:22,0:24:2.97:27,3,0	1/1:6,0:5:2.04:6,2,0
chr10	8854887	.	TTG	T	1619.19	PASS	AB=0.813;AC=23;AF=0.442;AN=52;BaseQRankSum=2.632;DP=638;FS=5.138;HRun=0;HaplotypeScore=98.4067;InbreedingCoeff=0.4308;MQ=64.37;MQ0=9;MQRankSum=1.940;QD=5.00;ReadPosRankSum=0.501;VQSLOD=2.3338;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:38:24.01:0,24,323	1/1:3,4:7:6.02:65,6,0	./.	0/0:23,0:11:0:0,0,0	0/0:19,0:19:15.05:0,15,224	0/0:21,0:21:0.37:0,0,362	0/1:20,3:23:80.14:80,0,113	1/1:29,3:30:2.40:59,2,0	1/1:18,1:27:24.93:136,25,0	0/0:24,0:22:30.10:0,30,391	0/0:14,0:17:5.04:0,5,32	1/1:22,5:27:9.02:98,9,0	1/1:22,7:29:11.87:131,12,0	0/1:19,5:24:19.43:146,0,19	0/0:25,0:22:12.02:0,12,136	0/0:9,0:23:18.01:0,18,173	0/1:13,12:25:1.24:294,0,1	0/0:13,0:18:14.22:0,14,111	1/1:14,0:14:3:26,3,0	1/1:15,5:21:14.87:145,15,0	0/1:15,3:17:14.41:136,0,14	1/1:13,12:24:21.05:230,21,0	0/0:15,0:20:2.63:0,3,19	0/0:29,0:27:8.58:0,9,78	0/0:29,0:29:30.07:0,30,400	1/1:12,3:16:11.86:112,12,0	0/1:28,6:36:65.76:135,0,66	./.
chr10	8857759	.	C	CTT	4352.40	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=-8.487;DP=699;FS=2.287;HRun=9;HaplotypeScore=86.0151;InbreedingCoeff=0.8747;MQ=71.87;MQ0=1;MQRankSum=0.306;QD=27.55;ReadPosRankSum=0.052;VQSLOD=5.0002;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:29:71.61:0,72,726	0/0:10,0:10:30.08:0,30,319	0/1:19,0:23:2.01:2,0,254	0/0:14,0:11:0.73:0,1,82	0/0:39,0:39:99:0,114,1213	0/0:23,0:23:66.15:0,66,702	0/0:27,0:27:72.16:0,72,766	0/0:26,0:27:51:0,51,598	0/0:29,0:29:72.12:0,72,766	1/1:5,19:27:39.27:929,39,0	1/1:6,23:30:69.19:1016,69,0	0/0:40,0:40:99:0,108,1142	0/0:22,0:22:54.07:0,54,566	0/0:26,0:26:69.15:0,69,734	1/1:4,23:27:55.43:834,55,0	0/0:25,0:25:72.18:0,72,766	0/0:24,0:24:54.08:0,54,575	0/0:14,0:14:39.07:0,39,405	0/0:25,0:25:57.10:0,57,601	0/0:27,0:28:71.88:0,72,738	0/0:20,0:20:51.08:0,51,534	0/0:11,0:11:33.08:0,33,351	1/1:3,17:22:50.66:747,51,0	1/1:4,21:29:14.28:824,14,0	0/0:18,0:19:44.78:0,45,450	0/0:28,1:29:31.99:0,32,745	0/0:46,0:46:99:0,118,1247	0/0:14,0:14:39.10:0,39,415
chr10	8859212	.	C	CT	18712.73	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-5.383;DP=583;FS=0.000;HRun=0;HaplotypeScore=52.6092;InbreedingCoeff=0.9763;MQ=65.00;MQ0=2;MQRankSum=-3.115;QD=33.36;ReadPosRankSum=2.994;VQSLOD=4.3998;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,28:27:45.15:692,45,0	1/1:0,8:8:18.06:286,18,0	0/0:12,0:12:36.08:0,36,475	0/0:10,0:8:24.08:0,24,335	1/1:14,8:25:63.18:886,63,0	1/1:0,28:26:42.14:651,42,0	1/1:1,24:21:45.15:718,45,0	1/1:4,18:20:48.13:676,48,0	1/1:1,16:17:36.12:575,36,0	1/1:1,19:18:48.16:755,48,0	1/1:0,15:14:12.04:188,12,0	1/1:0,28:27:78.27:1245,78,0	1/1:0,25:25:63.21:1006,63,0	1/1:0,24:25:66.22:1038,66,0	1/1:0,17:16:42.14:670,42,0	1/1:0,32:32:75.26:1199,75,0	1/1:2,25:27:81.24:1246,81,0	1/1:0,12:12:36.12:570,36,0	1/1:3,9:10:27.06:404,27,0	1/1:2,23:26:45.11:633,45,0	1/1:0,19:18:39.13:622,39,0	1/1:1,18:19:33.11:508,33,0	1/1:0,19:20:21.07:321,21,0	1/1:0,19:18:42.14:671,42,0	1/1:0,28:27:42.14:657,42,0	1/1:0,23:24:66.16:913,66,0	1/1:0,22:22:60.20:959,60,0	1/1:0,14:14:39.13:623,39,0
chr10	8859328	.	AG	A	2068.98	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=10.866;DP=667;FS=5.113;HRun=6;HaplotypeScore=127.8638;InbreedingCoeff=0.9856;MQ=67.05;MQ0=3;MQRankSum=-8.488;QD=25.54;ReadPosRankSum=-0.070;VQSLOD=2.0525;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:51:99:0,132,1669	0/0:16,0:16:48.16:0,48,631	0/0:21,0:20:57.15:0,57,710	0/0:21,0:18:48.42:0,48,579	0/0:31,0:31:72.22:0,72,934	0/0:27,0:25:69.21:0,69,893	0/0:24,0:22:51.15:0,51,656	0/0:31,0:30:75.19:0,75,955	0/0:19,0:19:48.15:0,48,623	1/1:1,22:23:63.16:677,63,0	1/1:3,11:14:33.08:354,33,0	0/0:31,0:31:93.30:0,93,1223	0/0:28,0:28:72.23:0,72,941	0/0:24,0:24:63.12:0,63,784	1/1:1,13:14:39.10:418,39,0	0/0:31,0:31:87.27:0,87,1129	0/0:30,0:30:81.25:0,81,1050	0/0:24,0:24:66.21:0,66,868	0/0:13,0:11:24.08:0,24,316	0/0:19,0:19:51.15:0,51,670	0/0:40,0:40:99:0,102,1326	0/0:22,0:22:66.21:0,66,868	1/1:3,16:19:51.13:547,51,0	1/1:4,7:11:24.04:248,24,0	0/0:24,0:24:60.20:0,60,790	0/0:26,0:26:78.25:0,78,1018	0/0:22,0:22:60.20:0,60,789	0/0:9,0:9:9.03:0,9,118
chr10	8859354	.	CT	C	20163.89	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-1.889;DP=672;FS=1.506;HRun=3;HaplotypeScore=81.3143;InbreedingCoeff=0.9153;MQ=74.02;MQ0=0;MQRankSum=-7.191;QD=31.65;ReadPosRankSum=5.443;VQSLOD=4.8154;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,48:48:99:1598,129,0	1/1:1,14:15:42.13:521,42,0	0/0:19,0:19:49:0,49,665	0/0:16,0:14:32.27:0,32,468	1/1:0,25:25:72.16:873,72,0	1/1:1,28:27:63.20:780,63,0	1/1:1,27:26:60.19:744,60,0	1/1:1,26:27:72.19:855,72,0	1/1:1,19:20:48.15:595,48,0	1/1:2,14:16:45.12:533,45,0	1/1:0,12:12:24.07:296,24,0	1/1:1,32:33:87.27:1077,87,0	1/1:0,31:31:75.23:924,75,0	1/1:0,27:27:72.23:891,72,0	1/1:2,14:16:33.09:395,33,0	1/1:2,31:33:84.26:1041,84,0	1/1:0,33:33:96.30:1189,96,0	1/1:1,26:27:72.23:892,72,0	1/1:1,13:13:36.10:433,36,0	1/1:0,21:21:63.11:746,63,0	1/1:0,45:45:99:1450,117,0	1/1:2,21:23:60.15:726,60,0	1/1:2,17:19:36.10:433,36,0	1/1:1,14:15:36.05:425,36,0	1/1:1,20:21:63.19:768,63,0	1/1:0,30:30:90.25:1087,90,0	1/1:1,24:25:69.22:855,69,0	1/1:0,4:4:3.01:37,3,0
chr10	8859566	.	G	GT	25648.76	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-4.148;DP=773;FS=3.283;HRun=3;HaplotypeScore=75.7158;InbreedingCoeff=0.8654;MQ=53.40;MQ0=4;MQRankSum=3.782;QD=35.18;ReadPosRankSum=2.425;VQSLOD=5.6364;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,39:41:99:1427,102,0	1/1:0,14:14:39.13:546,39,0	0/0:16,0:6:12.04:0,12,144	0/0:28,0:11:33.10:0,33,395	1/1:4,25:29:69.23:966,69,0	1/1:3,21:24:57.19:798,57,0	1/1:2,23:24:57.15:776,57,0	1/1:4,29:31:81.27:1129,81,0	1/1:0,30:30:81.23:1112,81,0	1/1:1,27:28:78.25:1076,78,0	1/1:1,25:26:63.21:882,63,0	1/1:1,29:30:75.21:1028,75,0	1/1:1,30:31:75.25:1049,75,0	1/1:2,32:34:81.27:1134,81,0	1/1:1,42:43:99:1638,117,0	1/1:1,26:27:66.22:924,66,0	1/1:4,27:31:0.23:851,0,0	1/1:0,29:27:78.26:1092,78,0	1/1:2,9:10:27.08:360,27,0	1/1:0,35:35:99:1363,99,0	1/1:0,26:26:69.23:966,69,0	1/1:3,20:23:57.19:797,57,0	1/1:1,37:38:99:1428,102,0	1/1:0,21:21:51.10:672,51,0	1/1:0,30:29:81.27:1134,81,0	1/1:3,29:31:84.27:1160,84,0	1/1:0,27:27:66.22:923,66,0	1/1:0,10:10:30.10:420,30,0
chr10	8859788	.	AC	A	3475.66	PASS	AB=0.923;AC=11;AF=0.196;AN=56;BaseQRankSum=9.297;DP=738;FS=0.000;HRun=5;HaplotypeScore=132.1636;InbreedingCoeff=0.9171;MQ=84.87;MQ0=0;MQRankSum=-3.880;QD=23.81;ReadPosRankSum=1.931;VQSLOD=1.8262;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,123,1609	0/0:8,0:8:24.08:0,24,328	0/0:29,0:29:78.23:0,78,1027	0/0:22,0:22:53.38:0,53,677	0/0:35,0:35:99:0,102,1395	0/0:20,0:20:54.07:0,54,714	0/0:20,0:20:57.19:0,57,780	0/0:31,0:31:81.27:0,81,1108	0/0:21,0:21:54.18:0,54,738	1/1:3,23:26:63.18:715,63,0	1/1:1,21:22:51.10:564,51,0	0/0:33,0:33:93.28:0,93,1240	0/0:22,0:22:63.13:0,63,807	0/0:27,0:27:78.23:0,78,1029	1/1:0,28:28:75.21:851,75,0	0/0:34,0:34:99:0,102,1394	0/0:28,0:28:81.27:0,81,1108	0/0:23,0:23:69.23:0,69,940	0/0:26,0:26:75.24:0,75,1009	0/0:32,0:32:93.28:0,93,1220	0/0:55,0:54:99:0,162,2127	0/0:28,0:28:78.25:0,78,1049	1/1:0,29:29:69.15:766,69,0	1/1:0,17:17:51.15:579,51,0	0/0:24,0:24:69.23:0,69,940	0/1:22,2:24:1.83:2,0,739	0/0:25,0:25:75.21:0,75,985	0/0:4,0:4:9.03:0,9,121
chr10	8862046	.	T	TA	26725.43	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-9.102;DP=719;FS=3.865;HRun=2;HaplotypeScore=61.7846;InbreedingCoeff=0.9957;MQ=83.07;MQ0=0;MQRankSum=-9.964;QD=39.48;ReadPosRankSum=5.195;VQSLOD=5.1517;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,24:27:69.23:993,69,0	1/1:1,13:14:33.11:474,33,0	0/0:21,0:21:63.19:0,63,772	0/0:21,0:21:54.07:0,54,669	1/1:1,33:34:96.28:1358,96,0	1/1:1,27:28:75.25:1080,75,0	1/1:2,24:26:72.24:1037,72,0	1/1:3,35:38:99:1425,99,0	1/1:0,21:21:60.20:864,60,0	1/1:2,29:31:87.29:1249,87,0	1/1:1,30:31:90.30:1296,90,0	1/1:0,20:20:60.20:864,60,0	1/1:0,38:38:99:1555,108,0	1/1:1,30:31:87.29:1253,87,0	1/1:1,33:34:93.31:1340,93,0	1/1:1,21:22:57.19:821,57,0	1/1:1,25:26:66.22:950,66,0	1/1:1,16:17:48.16:691,48,0	1/1:3,24:27:72.24:1035,72,0	1/1:3,30:33:90.30:1296,90,0	1/1:1,22:23:63.21:907,63,0	1/1:1,15:16:42.14:605,42,0	1/1:1,28:29:81.27:1167,81,0	1/1:0,16:16:45.15:648,45,0	1/1:0,24:24:66.22:951,66,0	1/1:0,25:24:75.25:1078,75,0	1/1:1,37:38:99:1544,109,0	1/1:1,7:8:18.05:242,18,0
chr10	8862233	.	T	TTTC	4694.59	PASS	AB=0.923;AC=11;AF=0.196;AN=56;BaseQRankSum=-7.191;DP=652;FS=20.256;HRun=0;HaplotypeScore=188.9096;InbreedingCoeff=0.8383;MQ=79.11;MQ0=0;MQRankSum=-2.330;QD=37.56;ReadPosRankSum=2.128;VQSLOD=4.0620;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:51.17:0,51,757	0/0:6,0:6:15.04:0,15,204	0/0:25,0:24:1.05:0,1,365	0/0:25,0:24:38.68:0,39,476	0/0:31,0:31:78.25:0,78,1138	0/0:28,0:28:63.21:0,63,927	0/0:21,0:21:54.17:0,54,780	0/0:33,0:33:63.20:0,63,899	0/0:14,0:14:39.12:0,39,551	1/1:6,17:23:51.18:1063,51,0	1/1:4,18:22:48.16:998,48,0	0/0:17,0:17:45.12:0,45,619	0/0:30,0:30:81.27:0,81,1198	0/0:24,0:24:66.22:0,66,975	1/1:2,16:19:48.16:975,48,0	0/0:22,0:22:57.19:0,57,841	0/0:34,0:34:81.16:0,81,1122	0/0:18,0:18:42.12:0,42,602	0/0:15,0:15:27.09:0,27,401	0/0:32,0:32:66.21:0,66,979	0/0:17,0:17:48.14:0,48,691	0/0:23,0:23:60.20:0,60,890	1/1:4,17:21:42.14:876,42,0	1/1:4,12:16:36.12:724,36,0	0/0:35,0:35:99:0,99,1466	0/1:22,2:23:58.77:59,0,824	0/0:36,0:36:99:0,108,1603	0/0:15,0:15:27.09:0,27,401
chr10	8862783	.	T	TAC	2784.36	PASS	AC=50;AF=0.962;AN=52;BaseQRankSum=0.268;DP=606;FS=9.244;HRun=0;HaplotypeScore=202.0556;InbreedingCoeff=0.3141;MQ=43.31;MQ0=6;MQRankSum=1.262;QD=4.72;ReadPosRankSum=1.699;VQSLOD=2.1567;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:38,0:37:11.97:100,12,0	1/1:6,0:6:2.99:24,3,0	0/0:7,0:2:3.01:0,3,33	./.	1/1:30,0:30:15.87:119,16,0	1/1:31,0:27:8.86:64,9,0	1/1:34,0:34:6.21:44,6,0	1/1:22,4:25:23.83:191,24,0	1/1:14,0:14:7.64:76,8,0	1/1:30,0:30:35.93:314,36,0	1/1:20,0:20:8.26:131,8,0	1/1:15,0:13:6:52,6,0	1/1:25,0:24:6:52,6,0	1/1:20,0:20:7.95:62,8,0	1/1:21,0:21:20.98:174,21,0	1/1:21,0:20:6:52,6,0	1/1:22,0:22:0.47:1,0,0	1/1:16,0:15:5.74:38,6,0	1/1:18,0:16:25.18:148,25,0	1/1:26,0:26:11.74:89,12,0	1/1:23,0:23:8.98:78,9,0	1/1:32,0:32:20.97:188,21,0	1/1:23,0:23:19.85:236,20,0	1/1:24,0:24:5.99:48,6,0	1/1:30,0:29:17.39:126,17,0	1/1:31,0:29:46.08:366,46,0	1/1:13,0:13:12:104,12,0	./.
chr10	8862804	.	A	ACACACACG	17215.08	PASS	AB=1.000;AC=51;AF=0.911;AN=56;BaseQRankSum=0.372;DP=737;FS=2.808;HRun=0;HaplotypeScore=231.0026;InbreedingCoeff=0.6243;MQ=47.78;MQ0=9;MQRankSum=-1.939;QD=24.42;ReadPosRankSum=6.291;VQSLOD=4.2211;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:38:17.52:428,18,0	1/1:8,0:8:9:158,9,0	0/0:16,0:7:18.03:0,18,211	0/0:16,0:12:33.02:0,33,347	1/1:31,0:31:43.14:635,43,0	1/1:34,0:30:25.99:366,26,0	1/1:28,0:28:26.40:406,26,0	1/1:26,0:23:49.97:773,50,0	1/1:5,1:25:15.01:381,15,0	1/1:7,21:36:85.35:2011,85,0	1/1:9,19:29:30.02:1098,30,0	1/1:8,1:23:15.02:455,15,0	1/1:16,0:33:7.08:666,7,0	1/1:14,1:33:24.08:717,24,0	1/1:9,17:28:16.15:1349,16,0	1/1:15,0:29:17.89:541,18,0	1/1:8,0:20:14.94:319,15,0	1/1:10,0:17:10.38:487,10,0	1/1:23,0:21:35.29:491,35,0	1/1:14,0:33:33.10:822,33,0	1/1:17,0:16:6.02:167,6,0	1/1:37,0:37:44.74:690,45,0	1/1:8,22:34:41.50:1331,41,0	1/1:10,13:24:4.48:135,4,0	1/1:28,0:27:33.80:584,34,0	1/1:35,0:33:94.89:1290,95,0	1/1:4,0:23:21.50:710,22,0	0/1:7,0:7:30.90:207,0,31
chr10	8864086	.	T	TA	2973.30	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-10.962;DP=577;FS=1.931;HRun=7;HaplotypeScore=58.6088;InbreedingCoeff=0.9946;MQ=78.13;MQ0=0;MQRankSum=-1.516;QD=27.28;ReadPosRankSum=1.632;VQSLOD=4.4653;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,111,1071	0/0:9,0:9:27.04:0,27,260	0/0:16,0:16:29.19:0,29,278	0/0:10,0:11:23.69:0,24,223	0/0:32,0:32:87.13:0,87,834	0/0:26,0:25:69.10:0,69,666	0/0:18,0:18:42.06:0,42,405	0/0:39,0:39:99:0,102,985	0/0:18,0:18:48.08:0,48,464	1/1:6,25:31:75.20:882,75,0	1/1:1,19:20:51.11:600,51,0	0/0:15,0:15:45.07:0,45,435	0/0:27,0:27:72.11:0,72,695	0/0:10,0:10:27.04:0,27,261	1/1:2,17:19:48.15:580,48,0	0/0:11,0:11:27.04:0,27,261	0/0:29,0:29:78.12:0,78,753	0/0:20,0:20:51.07:0,51,492	0/0:23,0:23:69.11:0,69,666	0/0:23,0:23:63.10:0,63,608	0/0:5,0:5:15.02:0,15,145	0/0:16,0:16:48.08:0,48,463	1/1:1,24:25:63.19:761,63,0	1/1:1,13:14:27.08:326,27,0	0/0:17,0:17:51.07:0,51,486	0/0:29,1:30:35.84:0,36,621	0/0:23,0:23:63.10:0,63,608	0/0:13,0:13:39.06:0,39,377
chr10	8866967	.	GC	G	3873.21	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=14.392;DP=626;FS=2.386;HRun=1;HaplotypeScore=71.1614;InbreedingCoeff=0.9978;MQ=89.91;MQ0=0;MQRankSum=-1.404;QD=39.93;ReadPosRankSum=1.386;VQSLOD=4.4143;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,159,2452	0/0:12,0:12:36.12:0,36,575	0/0:27,0:27:78.24:0,78,1192	0/0:21,0:21:32.53:0,33,868	0/0:23,0:23:69.22:0,69,1074	0/0:23,0:23:69.22:0,69,1076	0/0:26,0:26:78.22:0,78,1176	0/0:38,0:38:99:0,114,1740	0/0:19,0:19:57.19:0,57,911	1/1:0,28:28:84.28:1171,84,0	1/1:0,23:23:63.17:858,63,0	0/0:17,0:17:51.17:0,51,813	0/0:22,0:22:66.23:0,66,1054	0/0:25,0:25:72.25:0,72,1151	1/1:0,19:19:54.18:755,54,0	0/0:18,0:18:54.18:0,54,863	0/0:25,0:25:75.23:0,75,1173	0/0:10,0:10:30.08:0,30,454	0/0:17,0:17:51:0,51,779	0/0:23,0:23:69.22:0,69,1078	0/0:28,0:28:84.27:0,84,1318	0/0:25,0:25:75.26:0,75,1198	1/1:0,15:15:42.14:587,42,0	1/1:0,12:12:36.12:503,36,0	0/0:25,0:25:75.22:0,75,1152	0/0:24,1:25:30.28:0,30,1021	0/0:20,0:20:60.20:0,60,951	0/0:6,0:6:18.06:0,18,287
chr10	8867587	.	C	CT	17051.40	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-2.993;DP=596;FS=4.217;HRun=6;HaplotypeScore=91.1329;InbreedingCoeff=0.9025;MQ=74.29;MQ0=1;MQRankSum=-3.602;QD=29.97;ReadPosRankSum=3.502;VQSLOD=5.2885;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,24:26:66.21:830,66,0	1/1:1,11:12:33.02:394,33,0	0/0:17,0:16:14.52:0,15,164	0/0:10,0:10:5.20:0,5,86	1/1:3,34:37:99:1203,99,0	1/1:3,24:26:72.23:905,72,0	1/1:2,15:17:39.12:490,39,0	1/1:4,35:39:99:1168,108,0	1/1:3,20:23:45.14:566,45,0	1/1:1,23:24:66.16:778,66,0	1/1:6,26:32:69.01:803,69,0	1/1:2,18:20:45.14:564,45,0	1/1:1,18:19:42.13:528,42,0	1/1:1,15:16:33.11:415,33,0	1/1:2,23:25:60.19:755,60,0	1/1:1,11:12:30.10:377,30,0	1/1:1,26:27:57.18:717,57,0	1/1:0,18:18:51.16:641,51,0	1/1:4,20:24:60.19:755,60,0	1/1:1,27:28:77.95:869,78,0	1/1:1,11:12:24.08:302,24,0	1/1:1,18:19:47.95:529,48,0	1/1:3,21:24:57.10:696,57,0	1/1:0,6:6:18.06:226,18,0	1/1:0,24:24:60.19:754,60,0	1/1:2,26:28:75.21:917,75,0	1/1:1,22:23:57.18:717,57,0	1/1:0,7:7:12.04:151,12,0
chr10	8871415	.	TTCTC	T	441.70	PASS	AB=0.918;AC=8;AF=0.154;AN=52;BaseQRankSum=2.770;DP=539;FS=8.117;HRun=0;HaplotypeScore=96.5461;InbreedingCoeff=0.4161;MQ=58.01;MQ0=13;MQRankSum=-1.002;QD=4.80;ReadPosRankSum=1.289;VQSLOD=1.2022;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:21.05:0,21,315	0/0:13,0:13:6.02:0,6,95	./.	0/0:51,0:16:0:0,0,0	0/0:17,0:17:6.01:0,6,90	0/1:21,1:23:49.89:50,0,65	0/0:23,0:24:27.09:0,27,504	0/0:22,0:21:3.01:0,3,41	0/1:10,0:11:14.13:22,0,14	0/0:18,0:18:0.47:0,0,1	./.	0/0:15,0:15:9.03:0,9,180	0/0:17,0:21:2.86:0,3,56	0/0:19,0:19:21.01:0,21,274	1/1:16,7:23:24.04:340,24,0	0/0:9,0:10:14.79:0,15,217	0/0:20,0:18:23.97:0,24,337	0/0:10,0:11:18.05:0,18,289	0/0:18,0:17:3.01:0,3,52	0/0:17,0:17:3.01:0,3,42	0/0:15,0:16:15.05:0,15,253	0/0:17,0:18:9.03:0,9,177	1/1:13,1:14:6.02:92,6,0	1/1:20,1:21:6:70,6,0	0/0:11,0:11:6.02:0,6,119	0/0:11,0:16:28.91:0,29,451	0/0:24,0:23:29.93:0,30,404	0/0:10,0:9:15.52:0,16,239
chr10	8872206	.	A	ATGATGATGATGG	15341.14	PASS	AB=1.000;AC=27;AF=0.500;AN=54;BaseQRankSum=-4.014;DP=976;FS=6.884;HRun=0;HaplotypeScore=280.5645;InbreedingCoeff=0.6001;MQ=50.92;MQ0=17;MQRankSum=-6.790;QD=26.40;ReadPosRankSum=-1.971;VQSLOD=2.8029;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:5.26:0,5,2150	0/1:13,0:13:83.83:123,0,84	0/0:40,0:21:25.21:0,25,250	0/0:48,0:20:37.83:0,38,320	0/0:31,0:31:54.07:0,54,1251	0/0:34,0:33:99:0,99,2245	0/0:24,0:24:57.54:0,58,1107	1/1:40,0:40:85.18:1121,85,0	0/0:38,0:38:7.24:0,7,487	0/1:82,0:80:99:1308,0,285	0/0:38,0:37:11.84:0,12,88	1/1:9,34:46:36.12:2135,36,0	1/1:5,37:51:18.93:1790,19,0	1/1:7,25:37:30.10:1787,30,0	0/1:54,0:54:6.41:346,0,6	0/0:41,0:41:95.16:0,95,2454	./.	0/0:19,0:19:45.02:0,45,1233	1/1:7,17:25:54.73:1126,55,0	1/1:2,18:24:26.83:936,27,0	1/1:17,0:29:23.85:447,24,0	1/1:5,19:26:6.02:358,6,0	0/1:38,0:38:55.82:56,0,137	0/1:31,0:31:9.57:128,0,10	0/0:24,0:24:47.98:0,48,1079	1/1:7,28:37:74.07:1485,74,0	1/1:2,32:37:32.64:1971,33,0	1/1:9,0:9:20.25:223,20,0
chr10	8872234	.	T	TG	907.38	PASS	AB=0.822;AC=4;AF=0.071;AN=56;BaseQRankSum=3.988;DP=776;FS=0.579;HRun=0;HaplotypeScore=165.2979;InbreedingCoeff=-0.0931;MQ=62.28;MQ0=4;MQRankSum=-4.350;QD=8.40;ReadPosRankSum=-6.045;VQSLOD=2.2150;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:41,1:42:99:0,124,1682	0/0:7,3:10:21.07:0,21,292	0/0:18,0:16:48.12:0,48,637	0/0:25,0:19:57.16:0,57,759	0/0:25,0:25:54.16:0,54,734	0/0:34,0:34:95.65:0,96,1338	0/0:30,0:30:90.30:0,90,1243	0/1:28,8:36:99:242,0,1008	0/0:25,10:35:18.39:0,18,828	0/1:34,22:54:99:708,0,1112	0/0:12,18:29:23.69:0,24,317	0/0:32,1:33:49.25:0,49,428	0/0:36,0:36:35.01:0,35,270	0/0:28,0:28:40.25:0,40,395	0/0:40,4:44:92.98:0,93,1268	0/0:41,0:41:69.39:0,69,1506	0/1:13,0:13:30.18:30,0,111	0/0:18,0:18:51.17:0,51,712	0/0:14,0:14:41.62:0,42,529	0/0:27,0:27:39.89:0,40,586	0/0:30,2:32:0.10:0,0,245	0/0:18,0:18:5.12:0,5,167	0/0:12,16:28:20.81:0,21,292	0/0:18,13:30:27.09:0,27,373	0/0:18,0:18:45.13:0,45,610	0/0:21,0:21:37.13:0,37,563	0/0:30,0:30:25.68:0,26,392	0/1:2,1:3:36.24:36,0,74
chr10	8872403	.	AAC	A	10986.05	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=12.097;DP=901;FS=8.416;HRun=0;HaplotypeScore=124.0117;InbreedingCoeff=0.9957;MQ=57.90;MQ0=3;MQRankSum=4.553;QD=25.43;ReadPosRankSum=6.731;VQSLOD=5.0189;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,42:46:47.09:1025,47,0	0/0:13,0:13:36.11:0,36,592	0/0:35,0:29:77.45:0,77,1073	0/0:28,0:21:54.06:0,54,751	1/1:1,35:36:90.13:1116,90,0	1/1:3,26:29:60.20:796,60,0	1/1:4,30:34:52.67:714,53,0	0/0:22,0:22:48.07:0,48,711	1/1:5,26:31:54.18:716,54,0	1/1:0,33:33:93.08:1159,93,0	1/1:0,15:15:36.06:457,36,0	0/0:39,0:39:99:0,99,1634	0/0:47,0:47:99:0,126,2020	0/0:31,0:31:78.26:0,78,1258	1/1:2,48:50:84.28:1115,84,0	1/1:4,48:52:99:1393,105,0	0/0:37,0:37:99:0,105,1726	1/1:3,14:17:39.07:482,39,0	0/0:16,0:16:36.11:0,36,585	0/0:37,0:37:99:0,102,1693	0/0:45,0:45:99:0,135,2253	0/0:36,0:36:99:0,105,1700	1/1:2,13:15:33.07:419,33,0	1/1:5,42:46:66.19:858,66,0	1/1:3,24:27:57.14:737,57,0	0/0:43,0:43:99:0,120,1884	0/0:36,0:36:93.27:0,93,1495	0/0:4,0:4:12.04:0,12,207
chr10	8872497	.	TACACACACACACAC	T	563	PASS	AB=1.000;AC=9;AF=0.180;AN=50;BaseQRankSum=-1.231;DP=625;FS=1.320;HRun=0;HaplotypeScore=257.9230;InbreedingCoeff=0.5806;MQ=63.87;MQ0=25;MQRankSum=-0.138;QD=6.62;ReadPosRankSum=-0.143;VQSLOD=2.2525;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	0/0:8,0:8:13.40:0,13,512	0/0:26,0:21:3.01:0,3,90	0/0:30,0:18:3.01:0,3,124	0/0:18,6:25:2.99:0,3,24	1/1:18,3:20:3.01:74,3,0	0/1:14,0:14:17.98:18,0,117	0/0:48,0:48:77.74:0,78,2466	0/0:19,0:18:36.12:0,36,1544	0/0:10,0:16:22.27:0,22,386	./.	0/0:14,0:14:21.02:0,21,841	0/0:30,0:29:40:0,40,1324	0/0:24,0:24:25.31:0,25,886	0/0:28,0:28:39.12:0,39,976	1/1:12,7:21:6.02:229,6,0	0/0:21,0:19:24.75:0,25,912	1/1:9,2:9:3.78:296,4,0	0/0:19,0:19:31.60:0,32,1349	0/0:27,0:27:29.71:0,30,1564	0/0:30,0:26:15.01:0,15,533	0/0:28,0:28:42.13:0,42,2170	./.	0/0:37,0:36:39.13:0,39,1010	1/1:10,8:18:6.01:75,6,0	0/0:26,0:25:57.18:0,57,2292	0/0:20,0:20:39.37:0,39,1654	0/0:12,0:12:36.12:0,36,1611
chr10	8872583	.	GAGAGAGAGA	G	1700.99	PASS	AB=0.943;AC=17;AF=0.304;AN=56;BaseQRankSum=11.376;DP=614;FS=67.070;HRun=0;HaplotypeScore=209.8234;InbreedingCoeff=-0.3228;MQ=57.27;MQ0=33;MQRankSum=-1.107;QD=4.58;ReadPosRankSum=3.716;VQSLOD=0.2674;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:14:20.48:0,20,103	0/0:7,0:7:2.29:0,2,88	0/0:38,0:17:45.61:0,46,559	0/0:54,0:21:44.17:0,44,490	0/0:12,0:12:20.58:0,21,104	0/1:14,0:15:79.08:79,0,181	0/1:30,1:31:46.30:46,0,128	0/0:27,0:27:70.08:0,70,328	0/0:13,0:11:3.75:0,4,165	0/1:29,0:27:53.74:54,0,171	1/1:14,0:14:9.81:22,10,0	0/0:14,2:16:28.98:0,29,153	0/1:21,3:25:99:163,0,143	0/1:16,3:19:26.08:26,0,128	0/1:33,1:32:42.20:42,0,178	0/1:36,1:38:99:541,0,193	0/1:20,1:16:47.75:48,0,232	0/0:9,0:8:9.08:0,9,67	0/1:13,0:13:99:116,0,121	0/0:17,0:16:31.24:0,31,161	0/0:24,0:21:34.98:0,35,221	0/1:20,1:21:17.13:17,0,167	0/0:8,0:8:2.77:0,3,16	0/1:30,0:27:13.62:14,0,226	0/1:24,0:24:26.32:26,0,156	0/1:20,6:26:99:538,0,153	0/1:21,2:23:99:110,0,207	0/1:6,0:6:18.15:18,0,122
chr10	8875396	.	G	GACACAC	3713.01	PASS	AB=1.000;AC=37;AF=0.685;AN=54;BaseQRankSum=-0.399;DP=540;FS=9.842;HRun=0;HaplotypeScore=193.5869;InbreedingCoeff=-0.3609;MQ=62.73;MQ0=9;MQRankSum=-0.978;QD=7.69;ReadPosRankSum=-1.046;VQSLOD=1.8317;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:23:52.82:105,0,53	1/1:8,0:8:16.39:123,16,0	0/0:29,0:19:3.90:0,4,83	./.	1/1:19,0:19:17.74:153,18,0	0/1:26,0:26:19.17:197,0,19	0/1:17,0:15:17.87:124,0,18	1/1:35,0:35:29.93:274,30,0	0/1:24,0:24:37.30:37,0,101	1/1:27,0:28:3.39:325,3,0	0/1:23,0:23:67.76:122,0,68	0/1:19,0:18:27.64:40,0,28	0/1:21,0:21:25.31:362,0,25	0/1:15,0:15:15.24:155,0,15	1/1:26,0:25:29.19:333,29,0	0/1:23,0:22:8.32:156,0,8	0/1:9,0:9:34.02:57,0,34	1/1:9,0:9:11.93:89,12,0	1/1:10,0:10:16.90:138,17,0	0/1:18,0:18:5.25:106,0,5	1/1:9,6:15:3.01:52,3,0	1/1:18,0:18:1:126,1,0	0/1:14,0:14:52.16:72,0,52	0/1:16,0:16:3.89:83,0,4	0/1:23,0:23:48.45:75,0,48	1/1:20,0:20:31.17:268,31,0	0/1:20,0:20:47.15:117,0,47	1/1:3,0:3:2.98:21,3,0
chr10	8879103	.	TG	T	4225.34	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=14.615;DP=604;FS=8.669;HRun=2;HaplotypeScore=68.4428;InbreedingCoeff=0.9919;MQ=80.87;MQ0=0;MQRankSum=-3.082;QD=34.92;ReadPosRankSum=4.255;VQSLOD=5.0113;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,102,1525	0/0:9,0:9:27.05:0,27,342	0/0:21,0:21:60.17:0,60,851	0/0:26,0:26:72.15:0,72,987	0/0:20,0:20:60.18:0,60,858	0/0:26,0:26:78.23:0,78,1102	0/0:19,0:19:57.18:0,57,834	0/0:36,0:36:99:0,102,1489	1/1:0,24:24:69.22:895,69,0	1/1:2,10:13:33.06:410,33,0	1/1:0,18:18:51.17:662,51,0	0/0:23,0:23:69.22:0,69,1011	0/0:28,0:28:81.26:0,81,1193	0/0:27,0:27:81.25:0,81,1174	1/1:0,27:27:72.23:935,72,0	0/0:18,0:18:54.18:0,54,808	0/0:25,0:25:72.21:0,72,1035	0/0:20,0:20:60.20:0,60,899	0/0:24,0:24:72.22:0,72,1023	0/0:17,0:17:48.15:0,48,698	0/0:30,0:30:84.27:0,84,1228	0/0:4,0:4:12.04:0,12,180	1/1:1,16:17:48.16:623,48,0	1/1:1,21:22:54.18:701,54,0	0/0:21,0:21:63.18:0,63,886	0/0:20,0:20:60.19:0,60,880	0/0:28,0:28:84.28:0,84,1258	0/0:6,0:6:18.06:0,18,270
chr10	8879691	.	A	AT	9262.45	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-17.341;DP=614;FS=3.027;HRun=6;HaplotypeScore=56.8831;InbreedingCoeff=0.9943;MQ=81.22;MQ0=0;MQRankSum=-0.707;QD=34.31;ReadPosRankSum=3.100;VQSLOD=4.7936;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,24:26:72.23:906,72,0	0/0:8,0:8:18.03:0,18,177	0/0:19,0:19:51.57:0,52,543	0/0:18,0:17:34.52:0,35,314	1/1:1,31:32:93.26:1150,93,0	1/1:1,21:22:57.18:717,57,0	1/1:0,17:17:48.15:604,48,0	0/0:25,0:25:75.17:0,75,765	1/1:0,14:14:42.13:528,42,0	1/1:2,20:22:60.17:733,60,0	1/1:1,20:21:57.18:717,57,0	0/0:21,0:21:57.13:0,57,582	0/0:27,0:27:78.15:0,78,787	0/0:21,0:21:60.13:0,60,612	1/1:2,19:21:57.18:717,57,0	1/1:0,17:17:48.15:604,48,0	0/0:35,0:35:99:0,102,1034	1/1:1,9:10:30.05:359,30,0	0/0:31,0:31:81.14:0,81,815	0/0:30,0:30:81.18:0,81,826	0/0:12,0:12:36.08:0,36,367	0/0:25,0:25:72.16:0,72,734	1/1:1,25:26:69.22:868,69,0	1/1:0,12:12:33.11:415,33,0	1/1:3,27:30:75.24:944,75,0	0/0:35,2:37:26.74:0,27,904	0/0:30,0:30:84.19:0,84,857	0/0:5,0:5:12.03:0,12,122
chr10	8882466	.	GT	G	24242.90	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=5.283;DP=771;FS=3.503;HRun=3;HaplotypeScore=144.0582;InbreedingCoeff=0.9993;MQ=87.54;MQ0=0;MQRankSum=-11.575;QD=33.72;ReadPosRankSum=6.770;VQSLOD=3.4411;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,25:25:69.22:855,69,0	1/1:1,12:13:33.10:409,33,0	0/0:35,0:35:99:0,99,1392	0/0:17,0:17:43.51:0,44,543	1/1:4,22:26:63.20:780,63,0	1/1:1,28:29:81.25:1004,81,0	1/1:0,19:19:54.17:669,54,0	1/1:4,21:25:60.13:713,60,0	1/1:0,25:25:75.24:929,75,0	1/1:1,37:38:99:1361,111,0	1/1:0,35:35:99:1246,102,0	1/1:0,22:22:66.21:818,66,0	1/1:1,30:31:81.25:1004,81,0	1/1:0,21:21:60.19:743,60,0	1/1:2,47:49:99:1635,132,0	1/1:2,26:28:78.25:967,78,0	1/1:1,22:23:63.20:780,63,0	1/1:1,10:11:30.09:372,30,0	1/1:4,24:28:72.21:878,72,0	1/1:4,35:39:99:1301,105,0	1/1:2,20:22:54.17:669,54,0	1/1:1,35:36:96.30:1190,96,0	1/1:2,34:36:90.28:1115,90,0	1/1:1,19:20:57.18:707,57,0	1/1:1,31:32:90.28:1115,90,0	1/1:0,40:40:99:1421,117,0	1/1:3,33:36:96.30:1190,96,0	1/1:0,10:10:30.09:372,30,0
chr10	8883601	.	GT	G	5491.63	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=18.031;DP=779;FS=2.348;HRun=3;HaplotypeScore=87.1205;InbreedingCoeff=0.9998;MQ=89.86;MQ0=0;MQRankSum=-0.636;QD=33.08;ReadPosRankSum=4.227;VQSLOD=5.2596;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,114,1577	0/0:10,0:10:30.10:0,30,430	0/0:30,0:30:81.24:0,81,1134	0/0:29,0:29:81.25:0,81,1145	0/0:29,0:29:87.28:0,87,1234	0/0:23,0:23:69.22:0,69,975	0/0:28,0:28:84.28:0,84,1209	0/0:39,0:39:99:0,114,1612	1/1:0,35:35:99:1209,99,0	1/1:0,32:32:93.23:1123,93,0	1/1:1,17:18:42.13:520,42,0	0/0:26,0:26:75.25:0,75,1077	0/0:43,0:43:99:0,117,1619	0/0:24,0:24:69.23:0,69,992	1/1:1,37:38:99:1301,105,0	0/0:41,0:41:99:0,123,1754	0/0:16,0:16:48.14:0,48,671	0/0:13,0:13:36.12:0,36,514	0/0:19,0:19:57.14:0,57,796	0/0:30,0:30:81.26:0,81,1148	0/0:40,0:40:99:0,105,1475	0/0:24,0:24:69.22:0,69,973	1/1:0,17:17:45.61:558,46,0	1/1:2,24:26:63.20:781,63,0	0/0:31,0:31:87.28:0,87,1221	0/0:38,0:38:99:0,111,1564	0/0:31,0:31:90.29:0,90,1276	0/0:11,0:11:33.10:0,33,458
chr10	8884803	.	A	ATTTTT	14960.35	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=5.688;DP=560;FS=1.316;HRun=9;HaplotypeScore=106.7541;InbreedingCoeff=0.9810;MQ=69.48;MQ0=1;MQRankSum=-7.564;QD=35.96;ReadPosRankSum=-4.084;VQSLOD=2.3770;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,0:31:57.19:928,57,0	1/1:1,1:5:15.05:288,15,0	0/0:14,0:14:21.79:0,22,411	0/0:14,0:14:27.41:0,27,358	1/1:4,0:19:36.09:605,36,0	1/1:7,0:30:57.15:898,57,0	1/1:2,0:19:33.11:530,33,0	1/1:19,15:36:66.11:1130,66,0	0/0:5,0:5:15.05:0,15,248	0/0:29,0:29:78.17:0,78,1211	0/0:14,0:14:33.03:0,33,508	1/1:6,14:22:33.11:759,33,0	1/1:7,11:18:44.95:1125,45,0	1/1:21,7:29:80.30:1390,80,0	0/0:30,0:30:78.21:0,78,1267	1/1:5,0:28:59.78:971,60,0	1/1:3,17:22:33.11:806,33,0	1/1:2,0:17:33.07:520,33,0	1/1:11,1:21:38.99:604,39,0	1/1:6,3:15:24.01:436,24,0	1/1:3,9:13:18.02:337,18,0	1/1:2,7:11:18.02:364,18,0	0/0:14,0:14:33.06:0,33,503	0/0:24,0:24:57.08:0,57,918	1/1:2,0:20:45.10:722,45,0	1/1:1,19:24:68.94:1248,69,0	1/1:4,20:25:42.61:1044,43,0	1/1:0,6:7:9.03:255,9,0
chr10	8885102	.	TTA	T	2033.83	PASS	AB=1.000;AC=31;AF=0.674;AN=46;BaseQRankSum=0.743;DP=219;FS=5.326;HRun=0;HaplotypeScore=108.9054;InbreedingCoeff=0.4729;MQ=53.09;MQ0=0;MQRankSum=-4.194;QD=10.65;ReadPosRankSum=1.794;VQSLOD=2.8348;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,5:18:3.01:38,3,0	./.	0/0:4,0:2:3.01:0,3,38	0/0:3,0:2:0.89:0,1,2	1/1:11,5:16:5.95:42,6,0	1/1:13,4:17:9.67:123,10,0	./.	1/1:5,21:26:62.64:657,63,0	0/0:2,0:2:6:0,6,70	0/0:1,0:1:3.01:0,3,49	0/1:3,0:3:9.41:9,0,84	./.	1/1:3,7:10:3.01:35,3,0	./.	0/0:1,0:1:3.01:0,3,46	1/1:3,4:7:14.92:149,15,0	1/1:3,7:10:8.86:83,9,0	1/1:7,2:9:14.69:115,15,0	1/1:9,7:16:27.06:295,27,0	1/1:3,8:11:5.95:56,6,0	1/1:1,1:2:3.01:38,3,0	0/0:2,1:3:0:0,0,0	./.	0/0:2,0:2:3.01:0,3,42	1/1:10,3:13:5.96:51,6,0	1/1:3,7:10:21.01:200,21,0	1/1:7,11:18:17.92:161,18,0	1/1:1,4:5:11.77:113,12,0
chr10	8885114	.	GTATATATATATACA	G	2830.59	PASS	AC=24;AF=1.000;AN=24;DP=170;FS=0.000;HRun=0;HaplotypeScore=123.4559;InbreedingCoeff=-0.0556;MQ=43.56;MQ0=4;QD=21.28;VQSLOD=2.3950;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	1/1:12,2:14:6.02:176,6,0	1/1:15,1:16:12.04:304,12,0	./.	1/1:25,0:22:27.08:339,27,0	./.	./.	./.	./.	./.	./.	./.	1/1:3,3:6:9.03:302,9,0	1/1:9,1:10:9.03:195,9,0	1/1:6,0:6:15.04:206,15,0	1/1:10,2:11:15.03:325,15,0	1/1:8,1:9:3.01:96,3,0	./.	./.	./.	./.	1/1:8,2:10:6.02:218,6,0	1/1:6,1:7:18.03:265,18,0	1/1:12,1:13:12:204,12,0	1/1:3,2:5:9.03:275,9,0
chr10	8885118	.	A	ATGTG	2223.27	PASS	AB=0.784;AC=27;AF=0.844;AN=32;BaseQRankSum=-2.293;DP=176;FS=1.210;HRun=0;HaplotypeScore=127.8883;InbreedingCoeff=-0.0726;MQ=40.48;MQ0=4;MQRankSum=-0.621;QD=13.98;ReadPosRankSum=1.952;VQSLOD=3.5614;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:8,7:15:2.27:53,0,2	1/1:1,0:1:1.25:3,1,0	./.	./.	1/1:9,4:13:6.02:117,6,0	1/1:9,7:17:1.09:158,1,0	./.	1/1:22,0:19:22.98:511,23,0	./.	0/1:1,0:1:0:0,0,0	./.	./.	1/1:6,0:6:2.80:13,3,0	./.	./.	1/1:5,0:5:0.34:107,0,0	1/1:11,0:11:11.76:116,12,0	0/1:3,4:7:5.84:291,0,6	1/1:12,0:11:9.33:235,9,0	1/1:9,0:9:3.01:56,3,0	./.	./.	./.	./.	0/1:3,6:9:4.43:52,0,4	1/1:10,0:10:20.43:367,20,0	1/1:16,0:16:6.08:200,6,0	0/1:5,0:5:9.40:29,0,9
chr10	8885463	.	AATCAGTAAACGCT	A	21729.13	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=13.782;DP=403;FS=17.232;HRun=0;HaplotypeScore=162.9029;InbreedingCoeff=0.9349;MQ=95.83;MQ0=0;MQRankSum=-15.344;QD=93.66;ReadPosRankSum=4.381;VQSLOD=3.8018;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,15:15:42.14:1749,42,0	1/1:0,8:8:18.06:754,18,0	0/0:23,0:23:69.22:0,69,3596	0/0:23,0:23:69.20:0,69,3618	1/1:0,6:6:11.92:502,12,0	1/1:0,12:12:24.08:1005,24,0	1/1:0,15:15:33.11:1371,33,0	1/1:0,17:17:51.15:1825,51,0	0/0:22,0:22:66.23:0,66,4141	0/0:22,0:22:66.23:0,66,4479	0/0:13,0:13:39.12:0,39,2473	1/1:0,17:17:42.14:1750,42,0	1/1:0,13:15:35.46:1492,35,0	1/1:0,14:14:36.12:1507,36,0	0/0:33,0:33:99:0,99,6181	1/1:0,25:25:57.20:2387,57,0	1/1:0,10:10:24.08:1005,24,0	1/1:1,1:2:6.02:171,6,0	1/1:0,7:7:21.04:678,21,0	1/1:0,8:8:18.06:754,18,0	1/1:0,12:12:9.03:367,9,0	1/1:0,14:14:27.09:1131,27,0	0/0:14,0:14:39.13:0,39,2381	0/0:21,0:21:63.22:0,63,4178	1/1:0,8:8:20.74:706,21,0	1/1:0,12:12:33.11:1295,33,0	1/1:0,12:12:30.10:1257,30,0	1/1:3,0:3:2.99:24,3,0
chr10	8885647	.	TCTACTTGGAG	T	27737.89	PASS	AB=0.565;AC=39;AF=0.696;AN=56;BaseQRankSum=18.063;DP=609;FS=20.323;HRun=0;HaplotypeScore=200.2669;InbreedingCoeff=0.9054;MQ=90.52;MQ0=0;MQRankSum=-17.870;QD=72.23;ReadPosRankSum=3.036;VQSLOD=3.4687;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,21:25:48.12:1501,48,0	1/1:1,11:12:24.08:790,24,0	0/0:35,0:35:99:0,99,4041	0/0:24,0:24:69.17:0,69,3075	1/1:2,24:26:63.22:2061,63,0	1/1:1,18:19:36.12:1185,36,0	1/1:1,28:29:66.23:2157,66,0	1/1:7,24:31:72.16:1798,72,0	0/0:27,0:27:81.28:0,81,4120	0/0:35,0:35:99:0,102,5043	0/0:22,0:22:66.14:0,66,3089	1/1:1,16:17:42.14:1382,42,0	1/1:2,18:20:48.09:1579,48,0	1/1:0,21:21:45.15:1429,45,0	0/0:35,0:35:99:0,105,5065	1/1:1,23:24:50.91:1679,51,0	1/1:1,19:20:48.16:1580,48,0	1/1:0,4:4:12.04:395,12,0	1/1:2,12:14:36.07:965,36,0	1/1:5,19:24:48.03:1418,48,0	1/1:1,8:9:15.05:468,15,0	1/1:1,22:23:63.22:2047,63,0	0/0:28,0:28:84.29:0,84,4089	0/0:19,0:19:57.20:0,57,2939	1/1:1,18:19:48.16:1556,48,0	0/1:6,20:26:92.81:1886,0,93	1/1:4,12:16:45.11:1367,45,0	1/1:0,5:5:15.05:494,15,0
chr10	8886911	.	C	CTGTG	7357.27	PASS	AB=0.604;AC=38;AF=0.679;AN=56;BaseQRankSum=14.203;DP=887;FS=1.343;HRun=0;HaplotypeScore=253.5617;InbreedingCoeff=0.7814;MQ=62.69;MQ0=5;MQRankSum=-7.835;QD=11.77;ReadPosRankSum=-4.840;VQSLOD=3.3032;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:40,4:48:62.88:729,63,0	1/1:4,0:16:20.40:332,20,0	0/0:33,0:23:14.05:0,14,176	0/0:28,0:16:13.54:0,14,175	1/1:11,23:36:13.39:172,13,0	0/1:10,16:30:32.37:169,0,32	1/1:23,0:23:35.95:431,36,0	1/1:46,0:45:31.67:387,32,0	0/0:38,0:40:93.17:0,93,1379	0/0:43,0:43:55.34:0,55,1290	0/0:27,0:27:62.88:0,63,969	1/1:18,1:33:16.60:253,17,0	1/1:17,0:42:42.61:697,43,0	1/1:12,0:28:23.36:337,23,0	0/0:25,0:25:42.10:0,42,658	1/1:11,23:37:44.17:825,44,0	1/1:10,1:24:15.05:262,15,0	0/1:8,13:22:8.89:155,0,9	1/1:13,0:24:38.15:421,38,0	1/1:11,1:33:12.67:231,13,0	1/1:31,0:31:21.45:182,21,0	1/1:11,0:25:4.96:103,5,0	0/0:28,0:28:54.14:0,54,825	0/0:34,0:37:78.24:0,78,1201	1/1:12,23:38:28.46:442,28,0	1/1:14,2:36:58.82:799,59,0	1/1:22,0:38:28.95:378,29,0	1/1:3,0:9:3.01:53,3,0
chr10	8887658	.	G	GT	28870.41	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-0.673;DP=802;FS=11.281;HRun=2;HaplotypeScore=101.9912;InbreedingCoeff=0.9157;MQ=87.21;MQ0=0;MQRankSum=-11.562;QD=38.55;ReadPosRankSum=6.133;VQSLOD=3.6007;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,46:49:99:1890,132,0	1/1:0,9:9:24.08:346,24,0	0/0:27,0:27:81.22:0,81,969	0/0:26,0:26:42.21:0,42,722	1/1:2,26:28:75.25:1080,75,0	1/1:1,22:23:63.21:907,63,0	1/1:1,24:25:66.22:950,66,0	1/1:3,25:28:72.20:983,72,0	1/1:0,21:21:60.20:864,60,0	1/1:2,30:32:90.29:1272,90,0	1/1:0,19:19:51.17:734,51,0	1/1:0,27:27:78.26:1123,78,0	1/1:1,28:29:84.28:1206,84,0	1/1:2,27:29:81.27:1166,81,0	1/1:0,30:30:81.27:1167,81,0	1/1:1,32:32:78.26:1123,78,0	1/1:3,33:36:87.29:1253,87,0	1/1:1,34:34:93.31:1339,93,0	1/1:1,22:23:66.22:950,66,0	1/1:2,36:38:99:1469,102,0	1/1:1,50:51:99:1944,135,0	1/1:0,38:38:99:1510,105,0	1/1:2,23:25:60.16:841,60,0	1/1:0,30:30:81.27:1167,81,0	1/1:0,27:27:63.21:907,63,0	1/1:0,36:36:99:1555,108,0	1/1:2,25:27:75.25:1080,75,0	1/1:0,1:1:3.01:43,3,0
chr10	8889349	.	AAAAT	A	2493.03	PASS	AB=1.000;AC=13;AF=0.250;AN=52;BaseQRankSum=-5.793;DP=379;FS=0.000;HRun=0;HaplotypeScore=92.9909;InbreedingCoeff=0.7222;MQ=63.53;MQ0=4;MQRankSum=5.620;QD=17.43;ReadPosRankSum=5.814;VQSLOD=3.1211;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:12,0:19:15.56:16,0,101	0/0:7,0:8:9.02:0,9,135	0/0:17,0:9:8.97:0,9,83	0/0:16,0:12:14.17:0,14,124	0/0:6,0:6:11.99:0,12,108	0/0:4,0:20:21.07:0,21,366	./.	0/0:31,0:29:65.58:0,66,535	1/1:1,16:17:12.04:203,12,0	1/1:4,16:20:47.97:540,48,0	1/1:2,17:19:38.96:575,39,0	0/0:8,0:9:24.04:0,24,278	0/0:2,0:9:6.02:0,6,90	0/0:12,0:12:21.03:0,21,251	1/1:2,16:18:18.06:304,18,0	0/0:8,0:9:11.99:0,12,136	0/0:7,0:28:6.02:0,6,88	0/0:9,0:13:7.89:0,8,265	0/0:5,0:6:11.93:0,12,114	0/0:10,0:11:23.96:0,24,248	0/0:2,0:2:5.93:0,6,54	./.	1/1:9,8:17:38.93:475,39,0	1/1:10,23:33:33.01:558,33,0	0/0:4,0:11:18.06:0,18,281	0/0:3,0:4:3.01:0,3,52	0/0:9,0:12:23.98:0,24,288	0/0:9,0:9:3.01:0,3,42
chr10	8891509	.	CCAAG	C	6413.13	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=9.479;DP=825;FS=9.896;HRun=0;HaplotypeScore=228.3438;InbreedingCoeff=0.9843;MQ=69.21;MQ0=3;MQRankSum=-9.201;QD=37.29;ReadPosRankSum=2.442;VQSLOD=3.9363;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:47:99:0,123,2839	0/0:9,0:9:27.09:0,27,684	0/0:35,0:29:49.38:0,49,1373	0/0:26,0:23:54.18:0,54,1251	0/0:23,0:23:66.14:0,66,1453	0/0:23,0:23:63.14:0,63,1257	0/0:27,0:27:75.26:0,75,1741	0/0:34,0:34:93.29:0,93,1893	1/1:12,21:33:96.26:1527,96,0	1/1:10,23:33:99:1659,99,0	1/1:7,8:15:30.57:498,31,0	0/0:35,0:35:96.24:0,96,2175	0/0:52,0:52:99:0,147,3357	0/0:38,0:38:90.23:0,90,1918	1/1:12,25:37:87.29:1446,87,0	0/0:56,0:56:99:0,144,3547	0/0:29,0:29:84.29:0,84,2047	0/0:15,0:15:38.66:0,39,904	0/0:14,0:14:39.13:0,39,902	0/0:19,0:18:51.09:0,51,1079	0/0:52,0:52:99:0,117,2899	0/0:24,0:24:69.10:0,69,1419	1/1:11,19:31:63.67:988,64,0	1/1:8,15:23:18.06:295,18,0	0/0:32,0:32:81.23:0,81,1845	0/0:32,0:31:87.27:0,87,2042	0/0:27,0:27:66.21:0,66,1483	0/0:3,0:3:8.24:0,8,106
chr10	8891528	.	GACAGACAGAC	G	7115.71	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=13.088;DP=866;FS=24.886;HRun=0;HaplotypeScore=314.3304;InbreedingCoeff=0.9809;MQ=57.11;MQ0=15;MQRankSum=-12.241;QD=41.13;ReadPosRankSum=2.198;VQSLOD=2.8524;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:42:99:0,100,3472	0/0:8,0:8:24.08:0,24,881	0/0:31,0:21:34.70:0,35,1016	0/0:30,0:18:39.53:0,40,669	0/0:31,0:29:60.16:0,60,1967	0/0:23,0:22:48.15:0,48,1719	0/0:31,0:29:63.69:0,64,2299	0/0:36,0:34:70.69:0,71,1671	1/1:11,19:29:67.18:1798,67,0	1/1:14,16:32:93.09:2039,93,0	1/1:6,5:11:15.52:344,16,0	0/0:40,0:40:75.66:0,76,2775	0/0:48,0:48:99:0,116,4333	0/0:39,0:39:63.20:0,63,1913	1/1:24,18:41:79.14:1707,79,0	0/0:59,0:58:99:0,142,5037	0/0:34,0:34:75.16:0,75,2630	0/0:17,0:16:36.52:0,37,1134	0/0:16,0:16:42.08:0,42,1125	0/0:20,0:19:40.17:0,40,1184	0/0:67,0:66:91.89:0,92,4246	0/0:27,0:26:48.80:0,49,1473	1/1:12,13:27:45.14:955,45,0	1/1:18,9:27:14.06:273,14,0	0/0:28,0:26:60.19:0,60,2277	0/0:33,0:32:61.12:0,61,2755	0/0:28,0:28:54.17:0,54,1979	0/0:3,0:3:9.03:0,9,228
chr10	8891534	.	CAG	C	1627.88	PASS	AB=0.928;AC=15;AF=0.268;AN=56;BaseQRankSum=11.682;DP=896;FS=18.371;HRun=0;HaplotypeScore=228.1469;InbreedingCoeff=0.6492;MQ=56.89;MQ0=19;MQRankSum=-12.146;QD=6.17;ReadPosRankSum=-0.040;VQSLOD=1.6852;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,1:41:86.56:0,87,912	0/0:8,0:8:24.03:0,24,260	0/0:34,0:20:2.72:0,3,345	0/0:33,0:15:10.02:0,10,286	0/0:29,1:27:4.73:0,5,389	0/0:24,0:23:30.41:0,30,354	0/0:29,1:28:62.94:0,63,597	0/1:42,4:44:74:74,0,532	1/1:36,0:34:9.53:374,10,0	1/1:34,0:33:83.73:449,84,0	1/1:11,0:11:14.44:91,14,0	0/0:39,0:39:63.35:0,63,716	0/0:46,0:46:85.41:0,85,1110	0/0:42,0:42:59.97:0,60,573	1/1:40,0:38:73.03:448,73,0	0/0:57,1:57:99:0,112,1229	0/0:32,1:33:28.66:0,29,688	0/1:17,1:17:14.02:14,0,213	0/0:19,0:18:41.60:0,42,365	0/1:20,2:21:45.11:45,0,317	0/0:66,2:67:61.72:0,62,982	0/0:27,1:27:44.86:0,45,461	1/1:30,0:29:43.94:238,44,0	1/1:27,0:27:13.92:82,14,0	0/0:28,1:27:47.20:0,47,556	0/0:35,1:35:35.74:0,36,911	0/0:29,0:29:50.94:0,51,517	0/0:3,0:3:8.88:0,9,60
chr10	8891536	.	GAC	G	2505.69	PASS	AB=0.975;AC=14;AF=0.250;AN=56;BaseQRankSum=7.740;DP=942;FS=29.776;HRun=0;HaplotypeScore=230.9342;InbreedingCoeff=0.7991;MQ=56.93;MQ0=19;MQRankSum=-10.054;QD=11.34;ReadPosRankSum=0.170;VQSLOD=1.9277;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:42:68.95:0,69,655	0/0:4,0:9:15.01:0,15,148	0/0:34,0:20:19.76:0,20,239	0/0:32,0:15:15.05:0,15,213	0/0:8,0:26:33.76:0,34,309	0/0:9,0:26:38.89:0,39,363	0/0:18,0:32:38.99:0,39,373	0/0:45,0:43:26.17:0,26,850	1/1:25,10:33:42.03:603,42,0	1/1:25,8:32:79.80:818,80,0	1/1:10,2:12:12.03:137,12,0	0/0:11,0:42:44.68:0,45,453	0/0:18,0:50:89.80:0,90,780	0/0:16,0:46:32.72:0,33,273	1/1:28,12:38:53.29:584,53,0	0/0:24,0:60:91.22:0,91,898	0/0:13,0:36:37.30:0,37,452	0/1:10,1:18:11.17:11,0,183	0/0:8,0:17:27.04:0,27,309	0/1:11,0:23:6.28:6,0,189	0/0:18,0:71:62.04:0,62,729	0/0:11,0:32:34.29:0,34,270	1/1:21,10:30:40.23:430,40,0	1/1:23,4:27:8.52:103,9,0	0/0:10,0:29:12.75:0,13,439	0/0:14,1:40:31.95:0,32,896	0/0:6,0:31:35.98:0,36,312	0/0:5,0:5:15.01:0,15,162
chr10	8891765	.	A	AC	42027.18	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-6.923;DP=1028;FS=19.037;HRun=0;HaplotypeScore=129.0464;InbreedingCoeff=0.9997;MQ=75.01;MQ0=0;MQRankSum=-10.893;QD=43.19;ReadPosRankSum=6.428;VQSLOD=2.5589;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,25:25:66.23:1054,66,0	1/1:0,13:13:30.10:479,30,0	0/0:28,0:28:75.13:0,75,965	0/0:24,1:27:69.57:0,70,789	1/1:3,25:28:66.22:1054,66,0	1/1:0,25:25:72.25:1151,72,0	1/1:1,27:28:75.26:1199,75,0	1/1:1,57:58:99:2625,172,0	1/1:0,44:44:99:1911,123,0	1/1:0,48:48:99:2245,141,0	1/1:0,28:28:72.14:1151,72,0	1/1:0,33:33:87.30:1390,87,0	1/1:1,42:43:99:1868,117,0	1/1:0,52:52:99:2210,141,0	1/1:1,76:76:99:3132,205,0	1/1:1,44:45:99:1917,120,0	1/1:0,22:22:57.19:911,57,0	1/1:1,28:29:75.26:1198,75,0	1/1:0,21:21:60.20:952,60,0	1/1:0,36:36:99:1675,108,0	1/1:1,59:60:99:2294,144,0	1/1:1,43:44:99:1953,123,0	1/1:0,37:37:96.22:1534,96,0	1/1:1,25:26:66.22:1040,66,0	1/1:0,37:37:99:1774,111,0	1/1:1,52:53:99:2437,157,0	1/1:2,41:42:99:2010,126,0	1/1:0,18:18:54.18:863,54,0
chr10	8895784	.	CAGATAGATAGATAGATAGATAGAT	C	22618.77	PASS	AB=0.833;AC=38;AF=0.679;AN=56;BaseQRankSum=8.178;DP=818;FS=0.948;HRun=0;HaplotypeScore=407.9024;InbreedingCoeff=0.7522;MQ=56.73;MQ0=9;MQRankSum=-5.509;QD=38.27;ReadPosRankSum=0.889;VQSLOD=2.2990;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:22:48.02:228,0,48	1/1:3,12:15:18.06:1132,18,0	0/0:29,0:14:9.03:0,9,239	0/0:17,0:13:9.01:0,9,196	1/1:5,32:38:36.12:1447,36,0	1/1:11,24:35:18.06:1132,18,0	1/1:5,21:26:2.78:150,3,0	1/1:27,25:49:74.71:701,75,0	0/0:11,0:26:45.14:0,45,2968	0/0:17,0:36:72.24:0,72,4700	0/0:17,0:28:32.77:0,33,1970	1/1:10,24:34:18.06:1017,18,0	1/1:6,31:37:30.10:1769,30,0	1/1:7,26:33:33.11:1804,33,0	0/0:10,0:29:42.14:0,42,2806	1/1:9,24:33:21.07:1283,21,0	1/1:3,13:16:9.03:528,9,0	0/1:7,7:14:99:235,0,160	1/1:13,12:25:35.84:642,36,0	1/1:8,32:40:39.09:1924,39,0	1/1:15,0:15:8.97:133,9,0	1/1:6,23:29:18.06:1132,18,0	0/0:12,0:23:41.17:0,41,3509	0/0:27,0:39:51.16:0,51,3903	1/1:5,23:28:30.10:1849,30,0	1/1:10,44:54:99:4002,114,0	1/1:10,23:33:17.78:1132,18,0	1/1:7,5:12:6.02:377,6,0
chr10	8897255	.	AGT	A	533.95	PASS	AB=0.945;AC=24;AF=0.500;AN=48;BaseQRankSum=3.831;DP=630;FS=20.979;HRun=0;HaplotypeScore=84.0246;InbreedingCoeff=0.0239;MQ=68.06;MQ0=12;MQRankSum=-0.029;QD=1.50;ReadPosRankSum=0.997;VQSLOD=0.2529;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:9.02:0,9,105	1/1:7,0:7:3.01:32,3,0	./.	./.	0/0:9,0:9:3.01:0,3,42	0/0:18,0:19:0.91:0,1,121	0/1:24,0:24:4.76:5,0,89	./.	0/1:19,2:21:71.43:77,0,71	0/0:17,0:16:6.02:0,6,87	0/0:9,0:9:3.01:0,3,41	1/1:16,0:19:2.84:14,3,0	0/1:18,4:22:10.01:103,0,10	1/1:22,5:27:5.75:63,6,0	0/1:24,1:25:53.10:53,0,134	0/1:17,2:20:30.81:31,0,94	1/1:21,1:23:8.22:54,8,0	0/0:29,0:29:9.06:0,9,247	./.	1/1:12,0:11:3.01:32,3,0	0/1:53,0:50:15.61:30,0,16	1/1:18,1:18:2.87:31,3,0	0/0:7,0:7:3.01:0,3,43	0/1:36,1:37:42.19:42,0,158	0/0:26,0:26:12:0,12,116	1/1:23,0:22:3.01:31,3,0	0/1:14,0:14:11.14:35,0,11	1/1:8,1:9:5.84:46,6,0
chr10	8898763	.	GA	G	14976.71	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=12.543;DP=653;FS=6.214;HRun=4;HaplotypeScore=79.8934;InbreedingCoeff=1.0000;MQ=83.56;MQ0=0;MQRankSum=-5.464;QD=33.28;ReadPosRankSum=2.110;VQSLOD=5.5231;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:87.29:0,87,1217	1/1:1,15:16:45.14:540,45,0	0/0:17,0:17:47.13:0,47,641	0/0:21,0:21:57.14:0,57,745	0/0:29,0:29:78.26:0,78,1092	0/0:16,0:16:48.15:0,48,655	0/0:21,0:21:57.16:0,57,764	1/1:1,29:30:87.23:1019,87,0	1/1:2,20:22:63.18:744,63,0	1/1:1,28:29:81.22:957,81,0	1/1:1,18:19:57.17:684,57,0	1/1:1,25:26:72.22:864,72,0	1/1:2,30:32:84.25:1002,84,0	1/1:0,37:37:99:1260,105,0	1/1:2,30:32:93.28:1116,93,0	0/0:29,0:29:81.26:0,81,1118	1/1:2,24:26:75.23:899,75,0	0/0:18,0:18:54.18:0,54,756	1/1:3,16:19:51.15:601,51,0	1/1:1,13:14:39.12:468,39,0	1/1:5,18:23:51.14:600,51,0	1/1:0,19:19:57.17:684,57,0	1/1:1,20:21:54.15:635,54,0	1/1:1,29:30:81.25:972,81,0	0/0:20,0:20:54.18:0,54,756	1/1:0,20:20:60.18:720,60,0	1/1:1,22:23:66.19:781,66,0	1/1:0,12:12:36.11:432,36,0
chr10	8898846	.	TA	T	8567.10	PASS	AB=1.000;AC=49;AF=0.875;AN=56;BaseQRankSum=-3.777;DP=558;FS=0.644;HRun=11;HaplotypeScore=97.9768;InbreedingCoeff=0.5402;MQ=77.05;MQ0=0;MQRankSum=-2.718;QD=16.48;ReadPosRankSum=1.583;VQSLOD=5.3175;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:19:45.99:238,46,0	1/1:0,9:10:26.01:203,26,0	0/0:17,0:14:14.90:0,15,173	0/1:16,0:15:11.26:11,0,102	1/1:26,0:26:42.28:280,42,0	1/1:20,0:20:46.07:240,46,0	0/1:22,0:22:2.23:193,0,2	1/1:8,24:32:42.87:551,43,0	0/0:4,0:20:52.60:0,53,271	1/1:3,20:23:62.30:500,62,0	1/1:3,23:26:62.67:504,63,0	1/1:4,6:10:25.51:198,26,0	1/1:9,22:31:42.88:552,43,0	1/1:5,13:18:44.94:369,45,0	1/1:3,22:25:71.27:571,71,0	1/1:19,0:19:14.06:181,14,0	1/1:4,14:18:41.94:345,42,0	0/1:10,0:10:28.03:81,0,28	1/1:6,8:14:32.94:268,33,0	1/1:3,21:24:62.83:509,63,0	1/1:2,7:9:26.95:218,27,0	1/1:4,17:21:59.91:488,60,0	1/1:8,15:23:60.94:453,61,0	1/1:2,6:8:17.98:148,18,0	1/1:36,0:36:59.76:297,60,0	1/1:11,19:30:68.25:555,68,0	1/1:4,20:25:67.92:541,68,0	1/1:2,3:5:8.98:74,9,0
chr10	8898857	.	AT	A	4931.62	PASS	AB=1.000;AC=20;AF=0.357;AN=56;BaseQRankSum=-4.708;DP=558;FS=3.313;HRun=1;HaplotypeScore=102.6479;InbreedingCoeff=0.6279;MQ=73.77;MQ0=0;MQRankSum=-3.379;QD=23.94;ReadPosRankSum=6.596;VQSLOD=4.8692;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,17:17:48.16:664,48,0	0/1:11,0:11:2.69:3,0,46	0/0:17,0:14:24.47:0,24,260	0/0:10,0:9:20.44:0,20,166	1/1:3,25:28:80.83:960,81,0	1/1:0,22:22:48.16:662,48,0	1/1:4,17:21:58.87:786,59,0	0/0:32,0:32:39.36:0,39,272	0/0:22,0:22:41.30:0,41,415	0/0:25,0:25:25.76:0,26,167	0/0:26,0:26:7.44:0,7,92	0/1:11,0:11:0.15:0,0,58	0/0:28,0:28:5.57:0,6,87	0/0:17,0:17:1.32:0,1,37	0/0:26,0:26:10.89:0,11,70	1/1:1,22:23:44.42:621,44,0	0/0:17,0:17:3.15:0,3,54	1/1:3,7:10:22.89:328,23,0	0/0:16,0:16:14.25:0,14,132	0/1:21,0:21:3.41:8,0,3	0/0:12,0:12:10.24:0,10,69	0/0:22,0:22:0.60:0,1,48	0/0:25,0:25:24.37:0,24,158	0/1:7,0:7:6.77:7,0,17	1/1:0,32:32:66.18:890,66,0	0/0:28,0:28:21.96:0,22,151	0/0:29,0:28:10.05:0,10,145	1/1:3,0:3:1.36:3,1,0
chr10	8899916	.	G	GAAGA	5301.50	PASS	AB=1.000;AC=27;AF=0.500;AN=54;BaseQRankSum=4.366;DP=612;FS=2.222;HRun=0;HaplotypeScore=121.5142;InbreedingCoeff=0.4141;MQ=67.89;MQ0=1;MQRankSum=-0.910;QD=12.62;ReadPosRankSum=-2.574;VQSLOD=3.9962;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:29:55.45:693,55,0	0/0:12,0:11:2.13:0,2,23	0/0:33,0:24:14.85:0,15,114	0/0:16,0:13:2.58:0,3,13	1/1:30,0:30:54.06:613,54,0	1/1:26,0:25:16.20:122,16,0	1/1:15,0:14:23.95:205,24,0	0/0:33,0:33:42.20:0,42,459	0/0:17,0:17:26.91:0,27,224	1/1:11,11:23:11.12:420,11,0	1/1:28,0:28:48.71:410,49,0	0/1:15,0:14:15.69:16,0,78	0/0:18,0:18:12.84:0,13,97	0/0:19,0:19:22.33:0,22,177	1/1:28,1:29:58.36:947,58,0	0/1:27,0:27:3.94:238,0,4	0/1:19,0:19:5.74:6,0,99	1/1:21,0:21:38.97:408,39,0	0/0:16,0:16:14.46:0,14,236	0/0:17,0:17:7.22:0,7,67	./.	0/1:22,0:21:13.98:14,0,145	0/1:28,0:28:38.99:247,0,39	1/1:11,17:30:12.04:292,12,0	1/1:28,0:28:56.28:640,56,0	0/1:26,0:25:13.64:14,0,281	0/1:24,0:20:17.07:17,0,114	0/0:4,0:4:0.47:0,0,1
chr10	8899925	.	A	AAGAA	5183.17	PASS	AB=0.951;AC=27;AF=0.482;AN=56;BaseQRankSum=4.293;DP=614;FS=1.587;HRun=0;HaplotypeScore=121.8315;InbreedingCoeff=0.5311;MQ=58.19;MQ0=3;MQRankSum=-0.038;QD=13.29;ReadPosRankSum=-2.197;VQSLOD=4.3728;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:34,0:32:56.39:696,56,0	0/0:11,0:10:2.13:0,2,23	0/0:26,0:17:14.85:0,15,114	0/0:13,0:10:2.58:0,3,13	1/1:28,0:28:54.06:613,54,0	1/1:26,0:25:16.20:122,16,0	1/1:17,0:15:24.42:206,24,0	0/0:34,0:34:43.63:0,44,462	0/0:18,0:18:26.90:0,27,224	1/1:22,0:22:11.12:420,11,0	1/1:25,0:25:49.18:412,49,0	0/0:16,0:15:11.70:0,12,92	0/0:19,0:19:12.68:0,13,97	0/0:22,0:21:22.12:0,22,176	1/1:26,0:26:58.83:949,59,0	0/1:26,0:26:4.06:164,0,4	0/1:18,0:18:11.24:11,0,96	1/1:25,0:25:37.35:380,37,0	0/0:19,0:19:17.35:0,17,257	0/0:16,0:14:7.22:0,7,67	1/1:7,0:7:0.47:1,0,0	0/1:21,0:20:14.19:14,0,145	0/1:19,8:28:37.64:249,0,38	1/1:29,0:29:14.41:300,14,0	1/1:29,0:29:56.28:640,56,0	0/0:27,0:26:3.80:0,4,286	0/1:29,0:23:5.84:6,0,114	0/0:2,0:2:0.47:0,0,1
chr10	8899931	.	G	GAAAG	5193.55	PASS	AB=1.000;AC=27;AF=0.482;AN=56;BaseQRankSum=4.317;DP=608;FS=2.222;HRun=0;HaplotypeScore=119.4194;InbreedingCoeff=0.5089;MQ=56.14;MQ0=6;MQRankSum=0.495;QD=13.39;ReadPosRankSum=-0.858;VQSLOD=4.2412;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:35:56.39:696,56,0	0/0:10,0:9:2.13:0,2,23	0/0:21,0:12:14.85:0,15,114	0/0:12,0:9:2.58:0,3,13	1/1:28,0:27:54.06:613,54,0	1/1:26,0:25:16.20:122,16,0	1/1:17,0:14:24.42:206,24,0	0/0:37,0:37:42.95:0,43,462	0/0:19,0:19:26.90:0,27,224	1/1:22,0:22:11.12:420,11,0	1/1:16,9:26:49.65:413,50,0	0/0:17,0:15:11.70:0,12,92	0/0:19,0:19:13.18:0,13,98	0/0:22,0:21:22.18:0,22,176	1/1:26,0:26:58.83:949,59,0	0/1:27,0:27:4.06:164,0,4	0/1:15,0:15:27.22:27,0,93	1/1:25,0:25:37.35:380,37,0	0/0:17,0:17:14.41:0,14,236	0/0:15,0:13:7.22:0,7,67	1/1:7,0:7:0.47:1,0,0	0/1:21,0:20:14.19:14,0,145	0/1:25,0:25:37.64:249,0,38	1/1:27,0:26:12.04:292,12,0	1/1:31,0:31:56.76:641,57,0	0/0:30,0:29:0.01:0,0,282	0/1:28,0:22:5.84:6,0,114	0/0:1,0:1:0.47:0,0,1
chr10	8899937	.	A	AAGAAAG	5469.43	PASS	AB=0.970;AC=29;AF=0.518;AN=56;BaseQRankSum=3.374;DP=624;FS=10.476;HRun=0;HaplotypeScore=143.6656;InbreedingCoeff=-0.3575;MQ=51.79;MQ0=7;MQRankSum=-0.213;QD=9.93;ReadPosRankSum=0.098;VQSLOD=3.3446;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:36,0:36:3.52:960,4,0	0/1:10,0:9:18.05:22,0,18	0/0:15,0:9:14.85:0,15,114	0/0:8,0:5:2.58:0,3,13	1/1:26,0:27:63.06:735,63,0	1/1:27,0:26:15.41:124,15,0	0/1:21,0:21:10.53:280,0,11	0/1:41,0:41:17.14:17,0,399	0/1:18,0:18:14.03:14,0,203	0/1:20,0:20:73.05:333,0,73	0/1:24,0:25:36.68:272,0,37	0/1:19,0:17:31.44:31,0,76	0/0:18,0:18:13.59:0,14,98	0/0:21,0:20:0.24:0,0,152	0/1:26,0:26:52.82:604,0,53	0/1:8,16:25:54.68:113,0,55	0/1:16,0:16:59.04:59,0,90	0/1:27,0:27:39.86:436,0,40	0/1:23,0:23:18.27:18,0,218	0/0:11,0:9:7.22:0,7,67	1/1:11,0:11:3.45:22,3,0	0/1:21,0:19:37.74:38,0,145	0/1:26,0:26:99:183,0,157	0/1:29,0:28:99:132,0,117	1/1:32,0:33:10.32:837,10,0	0/1:32,0:31:99:140,0,278	0/1:29,0:23:75:75,0,123	1/1:3,0:3:2.45:24,2,0
chr10	8899939	.	G	GAA	3655.80	PASS	AB=0.973;AC=14;AF=0.250;AN=56;BaseQRankSum=2.822;DP=611;FS=26.241;HRun=3;HaplotypeScore=107.9090;InbreedingCoeff=0.0051;MQ=49.41;MQ0=7;MQRankSum=2.642;QD=11.39;ReadPosRankSum=3.082;VQSLOD=-0.6282;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:36,0:34:55.91:601,0,56	0/0:10,0:9:1.87:0,2,22	0/0:11,0:7:14.85:0,15,114	0/0:6,0:3:2.66:0,3,13	1/1:27,1:27:59.84:545,60,0	1/1:3,23:25:16.77:289,17,0	0/1:21,3:21:75.31:188,0,75	0/0:41,0:41:67.07:0,67,587	0/0:19,0:19:29.45:0,29,262	0/1:19,0:19:99:214,0,143	0/1:24,0:24:99:206,0,125	0/0:18,0:16:12.52:0,13,136	0/0:18,0:18:15.60:0,16,107	0/0:21,0:20:26.61:0,27,222	0/1:25,2:27:99:507,0,99	0/1:23,0:23:10.58:11,0,182	0/0:16,0:16:21.39:0,21,168	0/1:26,0:26:99:309,0,223	0/0:25,0:25:53.75:0,54,366	0/0:11,0:9:7.22:0,7,67	0/0:10,0:10:5.57:0,6,44	0/0:21,0:19:13.39:0,13,188	0/1:27,0:27:99:165,0,199	0/1:28,2:29:84.96:85,0,198	0/1:30,1:31:9.37:538,0,9	0/0:32,0:31:24.08:0,24,515	0/0:28,0:22:11.96:0,12,182	0/0:3,0:3:0.42:0,0,1
chr10	8901385	.	GA	G	4355.55	PASS	AB=0.965;AC=28;AF=0.500;AN=56;BaseQRankSum=-6.771;DP=562;FS=4.402;HRun=10;HaplotypeScore=85.9757;InbreedingCoeff=0.8569;MQ=79.24;MQ0=6;MQRankSum=-0.833;QD=14.47;ReadPosRankSum=3.731;VQSLOD=5.3026;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:47.16:0,47,502	1/1:2,6:8:14.99:130,15,0	0/1:54,2:36:10.18:10,0,209	0/0:49,1:25:31.19:0,31,241	0/1:26,1:27:11.63:12,0,554	0/0:14,0:13:33.09:0,33,365	0/0:17,0:17:36.09:0,36,390	1/1:5,21:26:62.97:546,63,0	0/0:16,0:16:39.09:0,39,422	0/0:26,0:26:66.14:0,66,712	0/0:17,0:17:45.11:0,45,488	1/1:3,14:17:41.99:364,42,0	1/1:0,14:14:29.99:261,30,0	1/1:1,14:15:41.99:365,42,0	0/0:15,1:16:13.05:0,13,372	0/0:21,0:21:51.09:0,51,536	1/1:5,19:24:17.73:375,18,0	0/0:15,1:16:19.13:0,19,438	1/1:6,8:14:29.95:253,30,0	1/1:2,21:24:64.98:545,65,0	1/1:1,7:8:20.99:182,21,0	1/1:2,5:7:17.49:139,17,0	0/0:10,0:10:27.06:0,27,291	0/0:14,0:14:42.09:0,42,455	0/0:15,0:15:39.11:0,39,431	1/1:3,21:24:32.81:513,33,0	1/1:4,24:28:32.58:513,33,0	1/1:2,5:7:17.93:148,18,0
chr10	8901406	.	GA	G	4324.40	PASS	AB=0.900;AC=25;AF=0.446;AN=56;BaseQRankSum=-5.826;DP=564;FS=1.609;HRun=10;HaplotypeScore=89.8258;InbreedingCoeff=0.8971;MQ=80.28;MQ0=6;MQRankSum=1.241;QD=18.56;ReadPosRankSum=4.172;VQSLOD=5.3339;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,24:27:37.16:431,37,0	0/0:8,0:8:24.04:0,24,254	0/0:51,3:36:36.58:0,37,339	0/0:44,2:26:2.33:0,2,165	1/1:5,21:26:41.19:522,41,0	1/1:0,16:16:41.99:365,42,0	1/1:2,14:16:29.99:260,30,0	0/0:39,0:39:90.22:0,90,973	0/0:13,1:14:13.08:0,13,360	1/1:0,22:22:65.91:564,66,0	1/1:1,19:20:47.96:416,48,0	0/0:16,1:17:19.09:0,19,439	0/0:16,0:17:32.76:0,33,346	0/0:18,0:18:54.13:0,54,588	1/1:2,12:14:35.99:312,36,0	1/1:4,17:21:11.81:331,12,0	0/0:18,1:20:22.02:0,22,430	1/1:1,16:17:47.99:417,48,0	0/1:16,2:18:3.68:4,0,409	0/0:24,0:24:66.17:0,66,723	0/0:12,1:13:6.71:0,7,268	0/0:8,0:8:21.06:0,21,232	1/1:3,7:10:23.99:208,24,0	1/1:2,13:15:32.99:286,33,0	1/1:3,8:11:23.99:208,24,0	0/0:20,1:22:26.15:0,26,482	0/0:23,0:24:56.85:0,57,594	0/0:6,0:6:15:0,15,166
chr10	8905420	.	AAAAC	A	18763.57	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=14.530;DP=714;FS=0.000;HRun=0;HaplotypeScore=138.7015;InbreedingCoeff=0.9876;MQ=70.56;MQ0=1;MQRankSum=-3.921;QD=36.36;ReadPosRankSum=3.415;VQSLOD=5.0146;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,22:29:57.19:957,57,0	1/1:1,12:13:27.09:460,27,0	0/0:28,0:26:54.05:0,54,1096	0/0:28,0:28:45.15:0,45,1036	1/1:4,14:18:42.10:650,42,0	1/1:3,27:30:75.26:1279,75,0	1/1:5,12:17:30.10:511,30,0	1/1:7,28:35:78.21:1230,78,0	1/1:1,21:22:57.20:972,57,0	0/0:34,0:34:78.27:0,78,1942	0/0:24,0:24:66.23:0,66,1644	1/1:4,19:23:57.19:966,57,0	1/1:9,24:33:66.22:1107,66,0	1/1:4,29:33:78.27:1329,78,0	0/0:26,0:26:57.18:0,57,1378	1/1:4,23:27:66.23:1122,66,0	1/1:5,34:39:84.29:1432,84,0	1/1:5,4:9:9.03:153,9,0	1/1:2,13:15:36.07:528,36,0	1/1:4,19:23:48.16:802,48,0	1/1:7,31:37:66.23:1124,66,0	1/1:3,14:17:30.10:510,30,0	0/0:29,0:29:63.22:0,63,1534	0/0:29,0:29:75.26:0,75,1880	1/1:2,19:21:54.18:920,54,0	1/1:9,22:31:66.23:1126,66,0	1/1:8,28:36:75.26:1276,75,0	1/1:0,6:6:18.06:306,18,0
chr10	8906170	.	TCA	T	11887.08	PASS	AB=1.000;AC=53;AF=0.946;AN=56;BaseQRankSum=-4.422;DP=706;FS=2.319;HRun=0;HaplotypeScore=104.9452;InbreedingCoeff=0.6841;MQ=62.31;MQ0=19;MQRankSum=3.351;QD=18.63;ReadPosRankSum=4.793;VQSLOD=5.0887;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:12,26:36:65.90:742,66,0	1/1:2,5:8:14.88:161,15,0	0/1:60,0:18:2.29:2,0,116	0/0:68,0:24:11.73:0,12,102	1/1:8,10:18:24.07:294,24,0	1/1:8,16:24:48.15:587,48,0	1/1:3,18:21:24.03:276,24,0	1/1:11,15:26:47.88:505,48,0	1/1:7,14:21:30.03:348,30,0	1/1:8,19:27:53.97:611,54,0	1/1:4,11:15:24.01:274,24,0	1/1:7,16:22:39.12:476,39,0	1/1:7,9:16:33.10:401,33,0	1/1:4,17:21:39.12:476,39,0	1/1:3,21:24:51.16:623,51,0	1/1:10,16:27:39.01:476,39,0	1/1:10,22:31:31.65:600,32,0	1/1:9,10:19:37.30:445,37,0	1/1:5,9:13:21:205,21,0	1/1:8,12:20:33.10:403,33,0	1/1:12,24:37:62.15:715,62,0	1/1:10,4:14:24.04:267,24,0	1/1:5,12:17:21.07:257,21,0	1/1:10,40:50:73.63:1114,74,0	1/1:2,13:15:24.08:293,24,0	1/1:4,18:22:54.15:638,54,0	1/1:6,18:25:56.99:661,57,0	1/1:1,2:3:3.01:37,3,0
chr10	8906227	.	G	GAC	4732.42	PASS	AB=0.844;AC=31;AF=0.574;AN=54;BaseQRankSum=-1.182;DP=612;FS=0.000;HRun=0;HaplotypeScore=117.2264;InbreedingCoeff=0.0850;MQ=52.88;MQ0=20;MQRankSum=-0.226;QD=9.72;ReadPosRankSum=-0.609;VQSLOD=4.3907;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:46,0:39:29.84:303,30,0	1/1:4,1:5:6.02:89,6,0	0/1:8,0:2:0:0,0,0	./.	1/1:19,1:16:15.95:190,16,0	1/1:16,1:16:18.03:155,18,0	1/1:25,2:24:13.51:136,14,0	0/1:32,0:29:63.89:130,0,64	0/0:14,0:15:14.38:0,14,148	0/1:21,0:19:1.08:1,0,203	0/0:19,0:20:23.69:0,24,344	0/1:15,2:18:48.67:173,0,49	0/1:10,8:18:49.28:332,0,49	0/1:16,6:22:36.08:327,0,36	0/0:17,0:19:20.88:0,21,206	1/1:15,0:17:18.30:182,18,0	0/1:24,10:32:48.67:555,0,49	0/1:7,0:18:0.20:67,0,0	0/1:18,0:17:52.37:118,0,52	0/1:22,3:24:57.23:268,0,57	1/1:39,8:42:17.74:496,18,0	0/1:11,13:24:68.09:327,0,68	0/0:15,1:18:3.36:0,3,163	0/0:34,0:36:32.69:0,33,319	1/1:20,1:21:13.95:111,14,0	0/1:22,4:27:99:352,0,127	0/1:12,5:17:4.45:330,0,4	1/1:0,2:2:6.02:91,6,0
chr10	8906260	.	T	TCA	3863.53	PASS	AB=1.000;AC=12;AF=0.214;AN=56;BaseQRankSum=2.029;DP=686;FS=15.707;HRun=0;HaplotypeScore=111.9969;InbreedingCoeff=0.7499;MQ=52.44;MQ0=22;MQRankSum=2.856;QD=20.33;ReadPosRankSum=0.041;VQSLOD=2.6610;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:40,2:37:62.87:941,63,0	0/0:6,0:6:11.02:0,11,108	0/0:50,0:13:35.75:0,36,386	0/0:46,0:14:33.17:0,33,342	1/1:20,2:19:51.14:761,51,0	1/1:18,4:20:41.24:575,41,0	1/1:22,0:19:36.57:531,37,0	0/0:25,0:23:39.24:0,39,508	0/0:23,0:23:57.01:0,57,728	0/0:22,0:21:57.10:0,57,712	0/0:21,0:21:54.17:0,54,690	0/0:29,0:28:32.20:0,32,666	0/0:18,0:18:19.23:0,19,271	0/0:21,0:21:1.18:0,1,290	0/0:16,0:16:33.08:0,33,390	0/0:22,0:21:48.89:0,49,485	0/1:28,0:28:6.71:7,0,365	0/0:13,0:13:22.19:0,22,194	0/0:13,0:13:25.39:0,25,350	0/0:27,0:27:52.94:0,53,562	0/0:52,0:49:76.63:0,77,835	0/0:26,0:25:18.47:0,18,389	0/0:17,0:17:42.08:0,42,517	0/0:28,0:28:51.17:0,51,666	1/1:25,2:27:69.20:1045,69,0	0/1:27,0:27:3.45:3,0,590	0/0:18,0:17:9.17:0,9,268	0/0:3,0:3:4.73:0,5,43
chr10	8913272	.	G	GCACA	4675.45	PASS	AB=0.693;AC=33;AF=0.611;AN=54;BaseQRankSum=-6.039;DP=570;FS=0.000;HRun=0;HaplotypeScore=142.7129;InbreedingCoeff=0.5905;MQ=64.12;MQ0=9;MQRankSum=1.995;QD=13.51;ReadPosRankSum=-2.910;VQSLOD=4.0819;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:41:24.49:0,24,221	1/1:6,4:10:6.02:142,6,0	./.	0/0:27,0:24:5.60:0,6,44	0/0:11,0:17:9.48:0,9,85	0/0:14,0:23:18.49:0,18,166	0/0:11,0:16:11.60:0,12,94	1/1:30,0:29:8.72:88,9,0	0/0:9,0:21:27.92:0,28,253	1/1:21,0:21:28.88:505,29,0	1/1:14,1:22:12:208,12,0	0/1:11,5:23:60.50:418,0,61	1/1:4,8:14:8.76:154,9,0	0/1:14,5:24:51.29:261,0,51	1/1:16,0:17:8.97:156,9,0	0/0:10,0:24:35.91:0,36,322	1/1:9,10:21:31.44:610,31,0	0/0:4,0:12:21.02:0,21,195	1/1:8,2:11:6.02:135,6,0	1/1:10,3:14:12.03:284,12,0	1/1:13,4:22:8.39:154,8,0	0/1:9,6:15:37.86:133,0,38	1/1:16,0:15:8.72:201,9,0	1/1:18,1:25:3.01:52,3,0	0/0:8,0:17:21.91:0,22,198	1/1:18,12:33:1.11:637,1,0	1/1:5,5:13:11.78:225,12,0	1/1:2,6:12:17.69:312,18,0
chr10	8914112	.	TCA	T	593.23	PASS	AB=0.720;AC=9;AF=0.180;AN=50;BaseQRankSum=-2.554;DP=499;FS=13.877;HRun=0;HaplotypeScore=104.1875;InbreedingCoeff=0.5841;MQ=61.68;MQ0=14;MQRankSum=1.727;QD=6.82;ReadPosRankSum=1.388;VQSLOD=2.6230;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:25:6.67:0,7,87	./.	./.	./.	0/0:26,0:24:20.46:0,20,156	0/0:32,0:30:14.23:0,14,142	0/0:15,0:15:6.02:0,6,83	0/0:20,0:19:5.99:0,6,61	0/0:12,0:12:5.49:0,5,33	1/1:15,4:19:8.91:97,9,0	1/1:11,5:16:14.87:144,15,0	0/0:10,0:14:3:0,3,26	0/0:15,0:22:5.72:0,6,46	0/0:13,0:13:11.39:0,11,80	0/1:11,7:18:23.47:174,0,23	0/0:9,0:18:14.80:0,15,131	0/0:14,0:13:9.01:0,9,93	0/0:5,0:10:15.16:0,15,107	0/0:16,0:12:7.73:0,8,71	0/0:18,0:15:18.02:0,18,186	0/0:18,0:17:11.22:0,11,85	0/0:13,0:11:5.80:0,6,64	1/1:12,9:21:18.05:195,18,0	1/1:8,5:13:12.03:130,12,0	0/0:19,0:21:9.01:0,9,96	0/0:22,0:21:36.34:0,36,314	0/0:19,0:31:17.95:0,18,169	0/0:8,0:6:6.02:0,6,78
chr10	8915431	.	GA	G	18857.42	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=2.913;DP=662;FS=3.222;HRun=3;HaplotypeScore=179.1170;InbreedingCoeff=0.9282;MQ=80.09;MQ0=0;MQRankSum=-9.298;QD=30.46;ReadPosRankSum=4.900;VQSLOD=3.8195;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:30,3:33:80.91:964,81,0	1/1:5,2:7:18.05:214,18,0	0/0:21,0:21:41.82:0,42,531	0/0:21,1:22:17.19:0,17,507	1/1:31,3:34:81.12:901,81,0	1/1:18,1:19:54.14:616,54,0	1/1:17,2:19:51.09:516,51,0	1/1:17,3:19:54.15:620,54,0	1/1:21,1:22:62.90:714,63,0	1/1:27,3:30:84.26:1013,84,0	1/1:30,1:31:80.95:883,81,0	1/1:24,2:26:72.18:816,72,0	1/1:16,1:17:51.12:569,51,0	1/1:29,1:30:86.95:976,87,0	1/1:35,1:36:99:1239,108,0	1/1:24,4:28:84.24:983,84,0	1/1:23,0:23:51.12:575,51,0	1/1:9,2:11:8.07:228,8,0	1/1:17,2:19:56.96:665,57,0	1/1:30,1:31:77.53:908,78,0	1/1:12,1:13:29.83:356,30,0	1/1:23,2:25:62.79:674,63,0	1/1:19,2:21:57.11:637,57,0	1/1:27,1:28:75.17:867,75,0	1/1:21,1:22:56.37:657,56,0	1/1:25,0:25:75.22:884,75,0	1/1:38,1:38:99:1278,111,0	1/1:10,0:10:9.03:104,9,0
chr10	8915433	.	A	AG	19491.03	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=3.211;DP=687;FS=5.645;HRun=0;HaplotypeScore=188.1207;InbreedingCoeff=0.8779;MQ=77.29;MQ0=0;MQRankSum=-8.970;QD=30.13;ReadPosRankSum=3.560;VQSLOD=4.3005;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:27,6:33:83.47:974,83,0	1/1:6,1:7:19.44:200,19,0	0/0:19,0:19:34.93:0,35,438	0/0:21,0:21:3.57:0,4,369	1/1:21,15:36:88.28:928,88,0	1/1:14,7:21:56.23:621,56,0	1/1:6,12:18:53.86:527,54,0	1/1:7,15:21:61.21:663,61,0	1/1:15,8:23:67.43:772,67,0	1/1:24,9:33:94.76:1135,95,0	1/1:21,10:31:85.40:906,85,0	1/1:18,7:25:71.93:819,72,0	1/1:11,6:17:50.92:565,51,0	1/1:21,11:32:89.41:1017,89,0	1/1:27,10:37:99:1265,110,0	1/1:21,7:28:83.88:964,84,0	1/1:21,5:26:52.07:599,52,0	1/1:8,4:12:22.08:258,22,0	1/1:13,8:21:59.68:663,60,0	1/1:23,8:31:83.83:953,84,0	1/1:10,6:16:31.64:329,32,0	1/1:12,11:23:64.38:694,64,0	1/1:17,7:24:60.63:648,61,0	1/1:26,5:31:79.71:908,80,0	1/1:15,8:23:62.15:691,62,0	1/1:23,5:28:82.73:957,83,0	1/1:28,11:38:99:1327,113,0	1/1:9,1:10:9.03:108,9,0
chr10	8915436	.	AG	A	15929.37	PASS	AB=0.778;AC=51;AF=0.911;AN=56;BaseQRankSum=8.267;DP=698;FS=38.781;HRun=1;HaplotypeScore=201.1953;InbreedingCoeff=0.8082;MQ=75.93;MQ0=0;MQRankSum=-7.451;QD=24.14;ReadPosRankSum=10.144;VQSLOD=1.1638;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:28,6:34:67.78:822,68,0	0/1:5,2:7:1.27:122,0,1	0/0:20,0:20:26.58:0,27,509	0/0:18,0:18:53.85:0,54,534	1/1:20,17:37:67.44:788,67,0	1/1:14,7:21:47.22:515,47,0	1/1:9,12:21:51.49:451,51,0	1/1:9,15:23:43.39:509,43,0	1/1:14,8:22:54.82:591,55,0	1/1:24,10:34:58.39:799,58,0	1/1:19,12:31:80.24:777,80,0	1/1:19,7:26:66.44:684,66,0	1/1:14,6:20:42.90:466,43,0	1/1:22,11:33:77.29:819,77,0	1/1:27,11:38:99:1062,104,0	1/1:21,7:28:51.43:712,51,0	1/1:21,6:27:55.11:553,55,0	1/1:7,5:12:11.46:183,11,0	1/1:13,9:22:41.91:556,42,0	1/1:19,11:30:78.76:838,79,0	1/1:9,7:16:6.26:229,6,0	1/1:12,11:23:54.53:537,55,0	1/1:17,7:24:41.22:508,41,0	1/1:26,5:31:83.26:836,83,0	1/1:15,8:23:68.92:650,69,0	1/1:20,5:25:71.89:671,72,0	1/1:26,12:37:99:1090,110,0	1/1:12,1:13:18:163,18,0
chr10	8915437	.	G	GA	23486.85	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=2.999;DP=705;FS=3.400;HRun=2;HaplotypeScore=177.2196;InbreedingCoeff=0.9642;MQ=75.07;MQ0=0;MQRankSum=-9.303;QD=35.16;ReadPosRankSum=5.021;VQSLOD=4.2500;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:33,1:34:84.26:1147,84,0	1/1:8,0:8:15.05:207,15,0	0/0:18,0:19:10.77:0,11,398	0/0:18,0:18:35.67:0,36,492	1/1:36,1:37:90.27:1174,90,0	1/1:20,2:22:60.20:809,60,0	1/1:16,5:21:60.15:721,60,0	1/1:19,6:24:66.22:905,66,0	1/1:21,1:22:63.20:841,63,0	1/1:31,3:34:90.29:1252,90,0	1/1:31,0:31:87.25:1131,87,0	1/1:26,0:26:75.17:940,75,0	1/1:19,3:22:54.17:713,54,0	1/1:30,3:33:93.30:1236,93,0	1/1:37,1:38:99:1484,111,0	1/1:28,0:28:78.24:1038,78,0	1/1:27,2:29:63.17:825,63,0	1/1:10,1:11:21.04:266,21,0	1/1:22,1:23:60.15:819,60,0	1/1:29,0:29:87.29:1191,87,0	1/1:13,2:15:30.04:389,30,0	1/1:23,0:23:63.18:777,63,0	1/1:23,2:25:60.18:794,60,0	1/1:29,3:32:87.28:1196,87,0	1/1:22,1:23:69.21:925,69,0	1/1:22,3:25:75.23:1012,75,0	1/1:39,0:38:99:1500,111,0	1/1:13,0:13:18.01:195,18,0
chr10	8915881	.	G	GC	97.43	PASS	AB=0.844;AC=2;AF=0.036;AN=56;BaseQRankSum=3.196;DP=834;FS=5.899;HRun=0;HaplotypeScore=82.5626;InbreedingCoeff=-0.0370;MQ=67.61;MQ0=0;MQRankSum=4.536;QD=3.25;ReadPosRankSum=-3.617;VQSLOD=1.7990;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,105,1445	0/0:13,0:13:36.10:0,36,485	0/1:9,4:14:99:114,0,231	0/1:14,1:13:72.43:72,0,221	0/0:39,0:38:99:0,111,1498	0/0:31,0:31:90.30:0,90,1258	0/0:34,0:34:99:0,99,1384	0/0:35,0:35:99:0,102,1427	0/0:34,0:34:99:0,99,1384	0/0:35,0:36:99:0,105,1421	0/0:31,0:31:93.28:0,93,1267	0/0:48,0:48:99:0,141,1939	0/0:41,0:41:99:0,123,1697	0/0:30,0:30:90.30:0,90,1258	0/0:36,0:36:99:0,105,1436	0/0:31,0:31:93.31:0,93,1300	0/0:20,0:20:60.20:0,60,837	0/0:21,0:21:63.17:0,63,859	0/0:26,0:26:69.23:0,69,964	0/0:45,0:45:99:0,135,1871	0/0:30,0:30:90.30:0,90,1258	0/0:38,0:38:99:0,114,1595	0/0:20,0:20:54.17:0,54,738	0/0:28,0:28:84.28:0,84,1173	0/0:24,0:24:72.24:0,72,1007	0/0:22,0:22:66.22:0,66,923	0/0:31,0:31:93.30:0,93,1282	0/0:22,0:22:66.22:0,66,922
chr10	8916948	.	AACAGAG	A	9113.20	PASS	AB=0.690;AC=38;AF=0.679;AN=56;BaseQRankSum=12.308;DP=565;FS=5.112;HRun=0;HaplotypeScore=190.0880;InbreedingCoeff=0.8152;MQ=51.09;MQ0=4;MQRankSum=-12.787;QD=24.56;ReadPosRankSum=-6.513;VQSLOD=2.9751;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:14,8:22:32.71:263,33,0	1/1:4,4:8:11.78:168,12,0	0/0:31,0:17:33.10:0,33,777	0/0:23,0:18:29.95:0,30,651	1/1:10,9:19:29.89:405,30,0	1/1:9,14:23:50.85:738,51,0	1/1:6,6:12:8.90:104,9,0	1/1:16,19:35:57.16:1098,57,0	0/0:27,0:27:60.21:0,60,1887	0/0:33,0:33:63.22:0,63,2071	0/0:20,0:20:48.16:0,48,1514	1/1:13,11:24:50.87:770,51,0	1/1:7,15:21:44.85:626,45,0	1/1:8,9:17:26.70:309,27,0	0/0:21,0:21:39.13:0,39,1272	0/1:5,13:18:70.38:371,0,70	0/1:9,3:12:54.16:115,0,54	1/1:8,2:10:11.98:149,12,0	1/1:7,6:13:27.08:514,27,0	1/1:10,25:35:67.98:462,68,0	1/1:12,0:12:17.57:243,18,0	1/1:6,11:17:35.65:283,36,0	0/0:23,0:23:54.16:0,54,1544	0/0:16,0:16:24.40:0,24,753	1/1:0,19:19:47.65:486,48,0	1/1:7,9:16:33.10:648,33,0	1/1:8,15:23:53.97:899,54,0	1/1:5,9:14:20.28:463,20,0
chr10	8917313	.	T	TA	6251.10	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-9.578;DP=450;FS=3.208;HRun=7;HaplotypeScore=71.8898;InbreedingCoeff=0.9812;MQ=84.04;MQ0=0;MQRankSum=-2.453;QD=30.05;ReadPosRankSum=0.570;VQSLOD=5.2649;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:33.05:0,33,319	1/1:0,7:7:21.06:254,21,0	0/0:13,0:14:6.89:0,7,263	0/0:12,1:13:12.90:0,13,241	0/0:28,0:28:69.11:0,69,666	0/0:23,0:23:66.11:0,66,637	0/0:14,0:14:39.05:0,39,370	1/1:8,26:35:81.10:945,81,0	0/0:10,0:10:27.04:0,27,261	0/0:13,0:13:39.06:0,39,377	0/0:14,0:14:39.06:0,39,377	1/1:1,13:14:33.10:399,33,0	1/1:3,10:13:30.09:354,30,0	1/1:0,12:12:36.11:435,36,0	0/0:17,0:17:51.08:0,51,493	0/0:17,0:17:45.05:0,45,429	1/1:2,13:15:33.10:399,33,0	0/0:17,0:17:51.08:0,51,493	1/1:2,17:19:51.11:589,51,0	1/1:3,20:23:60.15:706,60,0	1/1:0,9:9:24.07:290,24,0	1/1:3,8:11:24.07:286,24,0	0/0:22,0:22:57.07:0,57,545	0/0:7,0:7:18.02:0,18,174	0/0:20,0:20:54.08:0,54,521	1/1:2,21:23:63.19:761,63,0	1/1:0,20:20:48.15:580,48,0	1/1:0,7:7:21.06:254,21,0
chr10	8919075	.	A	ATGTGTGTTTG	4754.63	PASS	AB=0.998;AC=29;AF=0.518;AN=56;BaseQRankSum=-9.070;DP=742;FS=16.853;HRun=0;HaplotypeScore=213.7437;InbreedingCoeff=0.0171;MQ=70.16;MQ0=11;MQRankSum=0.894;QD=8.90;ReadPosRankSum=-5.240;VQSLOD=1.2549;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:37,0:38:49.76:50,0,85	0/1:9,0:9:99:135,0,122	0/0:27,0:20:21.01:0,21,419	0/0:25,0:20:27.95:0,28,281	1/1:29,0:28:59.38:404,59,0	1/1:22,0:23:17.69:126,18,0	1/1:22,0:22:8.98:104,9,0	1/1:40,0:40:14.16:665,14,0	1/1:8,15:28:5.56:280,6,0	0/1:29,0:29:50.89:459,0,51	0/1:17,0:17:99:159,0,213	0/0:31,0:31:35.36:0,35,307	0/0:28,0:28:18.64:0,19,187	0/1:31,0:30:99:294,0,279	0/0:36,0:36:12.15:0,12,354	1/1:30,0:30:26.67:386,27,0	0/1:28,0:27:99:185,0,708	1/1:13,0:13:11.95:166,12,0	0/1:22,0:21:36.65:263,0,37	0/1:30,0:30:99:112,0,212	0/0:37,0:37:35.49:0,35,432	0/1:19,0:18:81.03:81,0,113	0/0:24,0:24:8.50:0,8,134	0/1:24,0:24:99:198,0,225	1/1:26,0:25:9.43:100,9,0	0/1:35,0:34:99:352,0,487	0/1:28,0:28:99:182,0,886	0/1:12,0:12:56.44:56,0,208
chr10	8919077	.	G	GTGTGTT	6248.57	PASS	AB=0.969;AC=39;AF=0.696;AN=56;BaseQRankSum=-1.870;DP=782;FS=17.431;HRun=0;HaplotypeScore=175.2402;InbreedingCoeff=-0.1481;MQ=69.01;MQ0=14;MQRankSum=0.380;QD=8.56;ReadPosRankSum=-0.187;VQSLOD=2.5568;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:14,26:43:64.65:85,0,65	0/1:9,0:9:56.67:135,0,57	0/0:27,0:20:21.01:0,21,419	0/0:25,0:20:28.11:0,28,284	1/1:9,22:33:58.90:417,59,0	1/1:24,1:25:15.74:215,16,0	1/1:5,20:29:15.93:206,16,0	1/1:40,0:40:3.62:653,4,0	1/1:26,0:26:5.05:152,5,0	1/1:31,0:31:19.43:499,19,0	0/1:16,0:16:99:161,0,101	0/1:33,0:33:55.41:57,0,55	1/1:28,0:28:33.79:171,34,0	0/1:32,0:30:76.60:336,0,77	0/1:35,0:35:91.90:95,0,92	1/1:11,21:34:34.51:671,35,0	0/1:28,0:27:99:181,0,394	1/1:15,1:16:18.02:377,18,0	1/1:22,0:21:42.56:307,43,0	0/1:30,0:30:60.85:183,0,61	0/1:40,0:40:46.31:46,0,178	1/1:19,0:18:3.11:146,3,0	1/1:27,0:26:25.57:113,26,0	0/1:25,0:25:72.94:258,0,73	1/1:5,18:26:11.50:186,12,0	0/1:37,0:36:99:338,0,360	0/1:30,0:30:99:179,0,466	0/1:12,0:12:82.92:83,0,96
chr10	8919079	.	G	GTGTT	7129.61	PASS	AB=0.968;AC=35;AF=0.625;AN=56;BaseQRankSum=-3.023;DP=775;FS=27.306;HRun=0;HaplotypeScore=150.9258;InbreedingCoeff=-0.3041;MQ=67.16;MQ0=16;MQRankSum=2.572;QD=9.82;ReadPosRankSum=0.814;VQSLOD=2.6897;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:42,1:43:37.24:56,0,37	0/1:9,0:9:17.32:137,0,17	0/0:26,0:19:21.01:0,21,419	0/0:23,0:18:28.17:0,28,289	1/1:31,2:31:23.33:428,23,0	1/1:9,13:26:13.88:268,14,0	0/1:28,1:29:18.01:148,0,18	0/1:40,0:40:4.72:646,0,5	1/1:22,0:22:5.58:107,6,0	1/1:30,0:30:26.07:568,26,0	0/1:16,0:16:45.33:161,0,45	0/1:34,0:34:11.82:181,0,12	1/1:27,1:28:38.70:372,39,0	0/1:32,0:30:33.65:465,0,34	0/1:33,0:33:31.86:261,0,32	0/1:33,2:35:11.60:511,0,12	0/1:29,0:28:99:181,0,224	0/1:6,8:16:19.87:260,0,20	1/1:23,0:21:28.43:360,28,0	0/1:28,1:29:43.26:276,0,43	0/1:41,0:41:99:149,0,157	1/1:19,0:17:19.08:243,19,0	1/1:28,0:27:12.81:219,13,0	0/1:24,0:24:51.50:362,0,52	1/1:25,1:25:4.73:154,5,0	0/1:38,0:37:99:332,0,281	0/1:30,0:30:99:185,0,252	0/1:12,0:12:43.88:100,0,44
chr10	8919081	.	G	GTT	9841.50	PASS	AB=0.905;AC=42;AF=0.750;AN=56;BaseQRankSum=-6.568;DP=772;FS=30.925;HRun=1;HaplotypeScore=112.7176;InbreedingCoeff=-0.0264;MQ=64.55;MQ0=20;MQRankSum=1.948;QD=13.59;ReadPosRankSum=1.425;VQSLOD=0.3396;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:38,1:39:51.22:84,0,51	1/1:9,0:9:12.70:162,13,0	0/0:26,0:17:21.01:0,21,419	0/0:22,0:16:28.17:0,28,289	1/1:32,0:30:21.89:339,22,0	1/1:25,1:26:11.23:131,11,0	1/1:28,0:28:8.55:88,9,0	1/1:38,0:38:2.44:647,2,0	0/1:21,0:22:21.43:41,0,21	1/1:3,27:30:63:852,63,0	1/1:16,0:16:0.63:165,1,0	1/1:3,30:35:18.28:511,18,0	1/1:1,28:29:38.87:727,39,0	1/1:23,9:30:35.34:889,35,0	1/1:6,28:34:21.57:696,22,0	0/1:35,0:34:24.54:271,0,25	0/1:29,0:28:72:191,0,72	0/1:17,0:17:77.80:84,0,78	1/1:8,14:20:4.79:550,5,0	0/1:8,21:29:2.37:549,0,2	0/1:11,31:43:77.23:418,0,77	1/1:6,16:20:32.22:457,32,0	1/1:4,23:27:3.84:508,4,0	1/1:16,9:25:8.39:651,8,0	1/1:24,0:23:5.93:84,6,0	0/1:38,0:37:99:351,0,117	0/1:30,0:30:47.30:242,0,47	0/1:10,1:11:9.20:155,0,9
chr10	8919357	.	C	CT	2050.08	PASS	AB=0.938;AC=11;AF=0.196;AN=56;BaseQRankSum=-7.841;DP=534;FS=4.426;HRun=10;HaplotypeScore=60.1018;InbreedingCoeff=0.8445;MQ=73.17;MQ0=0;MQRankSum=2.264;QD=17.52;ReadPosRankSum=-0.912;VQSLOD=3.9367;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:45.77:0,46,519	0/0:10,0:10:17.92:0,18,143	0/0:21,0:20:24.27:0,24,185	0/0:17,0:17:23.63:0,24,194	0/0:19,0:21:42.99:0,43,331	0/1:14,1:15:8.07:8,0,148	0/0:13,1:14:0.97:0,1,214	0/0:23,0:23:44.91:0,45,369	0/0:14,0:14:26.94:0,27,222	1/1:6,18:25:32.43:525,32,0	1/1:3,6:9:18.01:181,18,0	0/0:21,0:21:53.92:0,54,443	0/0:21,0:21:38.92:0,39,320	0/0:10,0:10:20.95:0,21,172	1/1:4,22:26:63.15:666,63,0	0/0:16,0:16:44.93:0,45,366	0/0:32,0:32:80.86:0,81,662	0/0:17,0:17:26.92:0,27,222	0/0:15,0:15:19.23:0,19,276	0/0:23,0:23:50.87:0,51,416	0/0:20,0:20:15.67:0,16,272	0/0:16,0:16:38.92:0,39,316	1/1:3,12:16:38.93:398,39,0	1/1:5,21:26:42.11:448,42,0	0/0:22,0:22:53.90:0,54,442	0/0:21,2:24:30:0,30,442	0/0:20,0:21:49.98:0,50,400	0/0:9,0:9:20.97:0,21,172
chr10	8921503	.	G	GA	7551.05	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-13.864;DP=574;FS=0.345;HRun=9;HaplotypeScore=62.5469;InbreedingCoeff=0.9963;MQ=75.26;MQ0=0;MQRankSum=-2.769;QD=25.09;ReadPosRankSum=-2.384;VQSLOD=4.6295;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:47.94:0,48,410	1/1:2,10:12:27.07:299,27,0	0/0:13,0:13:23.98:0,24,208	0/0:13,0:12:17.90:0,18,148	0/0:27,0:27:65.98:0,66,571	0/0:20,0:20:53.97:0,54,464	0/0:16,0:16:41.98:0,42,364	1/1:10,24:34:69.17:752,69,0	0/0:14,0:14:40.81:0,41,344	0/0:0,0:23:45.37:0,45,135	0/0:2,0:17:28.29:0,28,83	1/1:6,17:23:42.06:450,42,0	1/1:3,18:21:51.14:562,51,0	1/1:4,19:23:28.09:538,28,0	0/0:4,0:21:30.55:0,31,90	0/0:25,0:25:56.94:0,57,491	1/1:2,19:22:50.97:545,51,0	0/0:19,0:19:41.98:0,42,365	1/1:4,16:20:51.11:550,51,0	1/1:5,24:29:43.13:704,43,0	1/1:3,13:16:36.10:398,36,0	1/1:4,10:14:30.08:332,30,0	0/0:1,0:18:30.56:0,31,90	0/0:2,0:11:16.30:0,16,48	0/0:17,0:17:47.98:0,48,417	1/1:3,32:37:92.09:1015,92,0	1/1:5,21:26:66.18:728,66,0	1/1:0,23:24:63:677,63,0
chr10	8921773	.	AC	A	3548.80	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=17.122;DP=507;FS=10.079;HRun=2;HaplotypeScore=111.5038;InbreedingCoeff=0.9907;MQ=92.78;MQ0=0;MQRankSum=-16.508;QD=17.31;ReadPosRankSum=0.594;VQSLOD=2.8386;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:93.32:0,93,1392	1/1:1,3:4:10.50:69,11,0	0/0:21,0:21:63.21:0,63,935	0/0:32,0:32:87.25:0,87,1260	0/0:22,0:22:60.20:0,60,898	0/0:22,0:22:63.21:0,63,942	0/0:16,0:16:48.15:0,48,699	1/1:10,9:19:35.40:270,35,0	0/0:14,0:14:39.13:0,39,582	0/0:25,0:25:75.25:0,75,1124	0/0:14,0:14:42.13:0,42,611	1/1:3,18:23:60.32:435,60,0	1/1:2,8:10:23.88:177,24,0	1/1:4,23:27:68.11:486,68,0	0/0:27,0:27:81.27:0,81,1213	0/0:21,0:21:63.21:0,63,944	1/1:6,10:16:21.43:175,21,0	0/0:10,0:10:27.09:0,27,405	1/1:1,15:16:47.85:379,48,0	1/1:2,17:19:39.45:311,39,0	1/1:3,8:11:18.37:131,18,0	1/1:4,10:14:34.35:240,34,0	0/0:15,0:15:45.15:0,45,675	0/0:15,0:15:45.15:0,45,672	0/0:15,0:15:45.15:0,45,675	1/1:0,15:15:44.89:352,45,0	1/1:3,19:22:53:400,53,0	1/1:4,5:9:17.08:124,17,0
chr10	8921776	.	ATAG	A	3525.83	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=17.451;DP=480;FS=9.198;HRun=0;HaplotypeScore=128.0004;InbreedingCoeff=0.9597;MQ=96.41;MQ0=0;MQRankSum=-16.725;QD=19.70;ReadPosRankSum=1.818;VQSLOD=3.2993;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:96.33:0,96,2349	1/1:1,3:4:0.72:56,1,0	0/0:24,0:24:72.25:0,72,1737	0/0:31,0:31:86.97:0,87,1968	0/0:20,0:20:60.21:0,60,1419	0/0:21,0:21:63.22:0,63,1553	0/0:15,0:15:45.14:0,45,1059	1/1:2,9:11:22.50:229,22,0	0/0:13,0:13:39.13:0,39,958	0/0:27,0:27:81.28:0,81,1997	0/0:13,0:13:39.13:0,39,961	1/1:3,18:21:57.22:455,57,0	1/1:1,8:9:23.86:176,24,0	1/1:1,23:24:67.65:490,68,0	0/0:27,0:27:81.28:0,81,1996	0/0:22,0:22:66.23:0,66,1602	1/1:3,10:13:26.20:186,26,0	0/0:10,0:10:30.10:0,30,738	1/1:1,15:16:47.91:393,48,0	1/1:2,17:19:29.28:300,29,0	1/1:0,8:8:16.60:131,17,0	1/1:2,10:12:22.68:228,23,0	0/0:15,0:15:45.15:0,45,1101	0/0:15,0:15:45.15:0,45,1109	0/0:16,0:16:48.16:0,48,1183	1/1:1,15:16:47.71:369,48,0	1/1:0,18:19:38.94:385,39,0	1/1:2,5:7:11.96:127,12,0
chr10	8921780	.	CA	C	3541.96	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=17.310;DP=488;FS=9.148;HRun=1;HaplotypeScore=107.8676;InbreedingCoeff=0.9889;MQ=97.88;MQ0=0;MQRankSum=-17.135;QD=20.01;ReadPosRankSum=1.596;VQSLOD=3.1355;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,99,1496	1/1:0,3:3:8.94:65,9,0	0/0:26,0:26:75.24:0,75,1141	0/0:31,0:31:84.08:0,84,1161	0/0:19,0:19:57.19:0,57,907	0/0:23,0:23:69.24:0,69,1098	0/0:15,0:15:45.15:0,45,717	1/1:1,9:10:29.88:232,30,0	0/0:13,0:13:39.13:0,39,623	0/0:28,0:28:84.29:0,84,1342	0/0:14,0:14:42.14:0,42,671	1/1:2,18:20:59.65:443,60,0	1/1:2,8:10:22.94:168,23,0	1/1:1,23:24:64.63:465,65,0	0/0:29,0:29:87.30:0,87,1391	0/0:22,0:22:66.21:0,66,1032	1/1:3,10:13:29.82:221,30,0	0/0:11,0:11:33.09:0,33,501	1/1:2,15:17:44.38:363,44,0	1/1:0,17:17:44.43:309,44,0	1/1:1,8:9:17.89:131,18,0	1/1:1,10:11:32.75:234,33,0	0/0:14,0:14:42.13:0,42,647	0/0:16,0:16:48.13:0,48,720	0/0:16,0:16:48.16:0,48,767	1/1:1,15:16:47.80:367,48,0	1/1:3,18:20:58.69:421,59,0	1/1:1,5:6:17.54:125,18,0
chr10	8921781	.	A	AC	4858.81	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=17.328;DP=515;FS=9.535;HRun=1;HaplotypeScore=111.3824;InbreedingCoeff=0.9904;MQ=95.08;MQ0=0;MQRankSum=-17.465;QD=23.82;ReadPosRankSum=0.038;VQSLOD=3.7972;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:99:0,99,1308	1/1:4,0:4:8.99:76,9,0	0/0:26,0:26:72.23:0,72,980	0/0:30,0:30:81.02:0,81,1009	0/0:19,0:19:57.19:0,57,795	0/0:24,0:24:69.23:0,69,961	0/0:15,0:15:45.15:0,45,626	1/1:15,1:16:47.84:430,48,0	0/0:14,0:14:39.13:0,39,545	0/0:28,0:28:84.27:0,84,1159	0/0:15,0:15:42.14:0,42,587	1/1:20,2:22:62.90:546,63,0	1/1:10,3:13:29.60:264,30,0	1/1:27,2:29:74.53:629,75,0	0/0:30,0:30:87.29:0,87,1217	0/0:22,0:22:66.21:0,66,907	1/1:15,0:15:38.89:329,39,0	0/0:11,0:11:33.08:0,33,441	1/1:17,2:19:57.10:590,57,0	1/1:18,0:18:44.94:372,45,0	1/1:11,0:11:23.99:205,24,0	1/1:11,1:12:32.96:273,33,0	0/0:13,0:13:39.13:0,39,545	0/0:15,0:15:45.14:0,45,612	0/0:16,0:16:48.16:0,48,670	1/1:17,0:17:48.06:474,48,0	1/1:22,0:21:59.40:494,59,0	1/1:6,0:6:18.03:175,18,0
chr10	8922472	.	TC	T	5195.85	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=6.537;DP=728;FS=10.425;HRun=4;HaplotypeScore=87.7938;InbreedingCoeff=0.9997;MQ=75.10;MQ0=0;MQRankSum=-4.248;QD=28.39;ReadPosRankSum=4.120;VQSLOD=4.0110;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,43:46:99:1367,114,0	0/0:18,0:18:54.17:0,54,740	0/0:24,0:24:57.12:0,57,749	0/0:16,0:16:35.25:0,35,403	1/1:2,22:24:55.02:634,55,0	1/1:0,24:24:60.18:720,60,0	1/1:0,28:28:72.22:864,72,0	0/0:30,0:30:66.19:0,66,864	0/0:21,0:21:63.19:0,63,832	0/0:25,0:25:63.20:0,63,868	0/0:18,0:18:42.11:0,42,542	0/0:33,0:33:96.25:0,96,1234	0/0:26,0:26:75.22:0,75,1000	0/0:24,0:24:69.20:0,69,916	0/0:39,0:39:99:0,108,1479	1/1:2,26:28:28.01:751,28,0	0/0:30,0:30:83.75:0,84,1153	1/1:0,12:12:33.10:395,33,0	0/0:20,0:20:54.16:0,54,729	0/0:25,0:25:72.16:0,72,889	0/0:41,0:41:99:0,117,1605	0/0:27,0:27:78.15:0,78,918	0/0:19,0:19:57.13:0,57,727	0/0:35,0:35:96.32:0,96,1337	1/1:1,20:21:39.12:466,39,0	0/0:36,0:36:87.26:0,87,1169	0/0:25,0:25:56.17:0,56,896	0/0:13,0:13:36.09:0,36,468
chr10	8923434	.	T	TACACAC	6386.67	PASS	AB=0.983;AC=44;AF=0.846;AN=52;BaseQRankSum=-7.231;DP=640;FS=2.918;HRun=0;HaplotypeScore=159.3535;InbreedingCoeff=0.5248;MQ=61.78;MQ0=4;MQRankSum=-5.168;QD=12.14;ReadPosRankSum=-1.792;VQSLOD=4.0797;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:27:37.28:192,0,37	1/1:12,0:12:2.93:86,3,0	./.	./.	1/1:27,0:27:9.71:189,10,0	1/1:33,0:33:20.93:214,21,0	1/1:23,0:23:4.24:55,4,0	1/1:40,0:40:27.34:252,27,0	0/0:8,0:15:20.66:0,21,259	1/1:24,0:24:9.83:222,10,0	1/1:9,0:25:22.92:257,23,0	1/1:19,0:19:23.68:568,24,0	1/1:14,0:14:5.99:116,6,0	1/1:14,0:15:8.66:266,9,0	1/1:10,7:22:12.04:281,12,0	0/0:24,0:24:28.74:0,29,155	1/1:24,0:24:7.38:288,7,0	0/1:23,0:23:8.63:9,0,328	1/1:15,0:15:8.53:45,9,0	1/1:29,0:29:33.10:768,33,0	1/1:14,0:14:12.51:206,13,0	1/1:34,0:34:30.85:743,31,0	1/1:10,11:23:9.01:231,9,0	1/1:15,5:24:6.40:194,6,0	0/0:29,0:29:34.08:0,34,153	1/1:17,0:17:8.91:427,9,0	1/1:27,0:28:26.41:408,26,0	1/1:13,0:13:15.89:370,16,0
chr10	8923465	.	A	ACACACG	8207.34	PASS	AB=0.735;AC=38;AF=0.679;AN=56;BaseQRankSum=-1.879;DP=714;FS=8.867;HRun=0;HaplotypeScore=139.8201;InbreedingCoeff=0.1160;MQ=55.38;MQ0=18;MQRankSum=-1.924;QD=13.11;ReadPosRankSum=6.052;VQSLOD=3.0868;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:10,0:34:52.64:223,0,53	1/1:4,7:12:2.84:105,3,0	0/0:24,0:5:15.03:0,15,147	0/0:21,0:8:18.03:0,18,188	1/1:1,0:28:28.43:347,28,0	1/1:6,0:36:3.38:270,3,0	0/1:4,0:18:19.32:85,0,19	1/1:43,0:42:75.70:679,76,0	0/0:16,0:16:44.95:0,45,505	0/0:27,0:27:32.59:0,33,469	0/1:32,0:32:84.62:85,0,205	1/1:3,18:26:17.51:614,18,0	1/1:3,9:16:5.99:146,6,0	1/1:7,12:22:17.54:333,18,0	0/1:29,0:29:99:161,0,222	0/1:1,0:19:37.22:60,0,37	1/1:19,1:23:13:500,13,0	0/1:10,0:27:40.76:41,0,237	1/1:17,0:16:21.05:232,21,0	1/1:3,26:31:38.99:934,39,0	1/1:18,0:18:29.30:421,29,0	1/1:3,28:35:8.43:872,8,0	0/1:25,0:25:99:157,0,113	0/1:27,0:27:99:283,0,140	0/1:3,0:31:34.68:76,0,35	1/1:4,17:22:30.40:749,30,0	1/1:8,1:29:8.66:437,9,0	0/1:4,17:23:8.14:400,0,8
chr10	8925205	.	T	TG	1213.66	PASS	AB=1.000;AC=35;AF=0.700;AN=50;BaseQRankSum=1.837;DP=66;FS=4.607;HRun=5;HaplotypeScore=11.1532;InbreedingCoeff=0.5018;MQ=105.22;MQ0=0;MQRankSum=-2.895;QD=25.82;ReadPosRankSum=0.914;VQSLOD=1.2631;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,0:1:3.01:35,3,0	1/1:0,2:2:6.02:86,6,0	0/0:4,0:4:9.02:0,9,103	0/0:5,0:4:14.92:0,15,152	1/1:0,3:3:6.02:84,6,0	1/1:0,5:5:12.04:166,12,0	1/1:1,2:3:6.02:83,6,0	1/1:0,6:6:18.06:246,18,0	0/0:1,0:1:3.01:0,3,39	./.	0/0:1,0:1:3.01:0,3,39	1/1:0,4:4:9.03:125,9,0	1/1:0,1:1:3.01:32,3,0	1/1:0,4:4:9.03:118,9,0	0/0:1,0:1:3.01:0,3,39	1/1:0,3:3:6.02:84,6,0	1/1:0,2:2:3.01:40,3,0	1/1:0,2:2:6.02:77,6,0	1/1:2,0:2:3.01:36,3,0	1/1:0,2:2:3.01:36,3,0	1/1:0,2:2:3.01:42,3,0	1/1:0,1:1:3.01:34,3,0	0/0:2,0:2:6.02:0,6,77	0/0:5,0:5:15.05:0,15,191	1/1:0,2:2:3.01:41,3,0	0/1:2,0:2:0:0,0,0	./.	./.
chr10	8929283	.	TA	T	11939.12	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=13.354;DP=649;FS=1.562;HRun=7;HaplotypeScore=95.4266;InbreedingCoeff=0.9944;MQ=68.56;MQ0=0;MQRankSum=-0.914;QD=24.98;ReadPosRankSum=3.670;VQSLOD=5.0512;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,26:27:69.16:704,69,0	1/1:0,10:10:27.06:275,27,0	0/0:22,0:22:58.70:0,59,686	0/0:15,0:15:39.01:0,39,440	1/1:6,19:25:57.13:581,57,0	1/1:2,24:26:60.14:612,60,0	1/1:3,18:21:48.11:490,48,0	1/1:8,30:38:90.17:904,90,0	0/0:15,0:15:42.13:0,42,528	0/0:27,0:26:66.21:0,66,830	0/0:25,0:25:72.23:0,72,906	1/1:2,17:19:48.11:490,48,0	1/1:3,22:25:60.13:612,60,0	1/1:1,22:23:60.13:612,60,0	0/0:24,0:24:63.20:0,63,792	1/1:2,20:22:54.12:551,54,0	1/1:0,27:26:69.16:704,69,0	1/1:0,16:16:36.08:367,36,0	1/1:1,25:26:75.16:759,75,0	1/1:1,38:39:99:1102,108,0	1/1:3,14:17:33.07:337,33,0	1/1:2,16:18:39.08:398,39,0	0/0:27,0:27:75.23:0,75,932	0/0:16,0:16:39.12:0,39,491	1/1:0,25:25:63.14:643,63,0	1/1:4,21:25:28.41:605,28,0	1/1:4,37:41:99:1071,105,0	1/1:4,4:8:12.03:122,12,0
chr10	8929796	.	CCT	C	9161.79	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=17.038;DP=579;FS=3.758;HRun=0;HaplotypeScore=234.8819;InbreedingCoeff=0.9636;MQ=79.67;MQ0=0;MQRankSum=-15.972;QD=22.57;ReadPosRankSum=1.439;VQSLOD=4.7226;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,13:25:41.81:437,42,0	1/1:0,3:9:13.33:132,13,0	0/0:16,0:16:48.12:0,48,820	0/0:25,0:25:71.89:0,72,1384	1/1:0,8:22:41.12:512,41,0	1/1:1,13:31:41.42:569,41,0	1/1:1,10:16:29.84:371,30,0	1/1:0,28:28:84.25:1281,84,0	0/0:23,0:23:69.24:0,69,1399	0/0:31,0:31:93.32:0,93,1873	0/0:12,0:12:36.12:0,36,712	1/1:0,11:22:33.77:446,34,0	1/1:0,13:31:38.64:606,39,0	1/1:0,11:16:32.48:461,32,0	0/0:31,0:31:93.31:0,93,1852	1/1:0,9:23:30.94:368,31,0	1/1:0,9:13:20.81:267,21,0	1/1:0,2:4:3.01:49,3,0	1/1:0,13:21:36.44:602,36,0	1/1:0,15:24:50.38:708,50,0	1/1:0,8:10:26.80:341,27,0	1/1:0,10:19:23.33:188,23,0	0/0:23,0:23:69.24:0,69,1361	0/0:12,0:12:36.11:0,36,674	1/1:0,14:29:34.45:523,34,0	1/1:0,11:22:42.01:530,42,0	1/1:1,12:29:45.62:567,46,0	1/1:0,7:11:15.94:205,16,0
chr10	8929798	.	T	TTGTTCAC	32879.77	PASS	AB=0.760;AC=21;AF=0.375;AN=56;BaseQRankSum=8.915;DP=730;FS=10.779;HRun=0;HaplotypeScore=313.3241;InbreedingCoeff=-0.4099;MQ=73.22;MQ0=0;MQRankSum=-12.297;QD=59.14;ReadPosRankSum=3.174;VQSLOD=3.8377;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:22,12:34:6.56:1984,0,7	0/1:6,6:12:21.61:956,0,22	0/0:16,0:16:33.13:0,33,969	0/0:27,0:27:68.84:0,69,1722	1/1:20,13:33:31.16:2230,31,0	0/1:23,17:41:99:2614,0,202	0/1:18,5:23:98.53:1330,0,99	0/1:51,0:50:99:2379,0,492	0/0:23,0:23:69.24:0,69,1825	0/0:31,0:31:90.30:0,90,2373	0/0:12,0:12:36.11:0,36,878	0/1:17,11:28:99:1545,0,180	0/1:22,16:40:99:2721,0,195	0/1:16,5:21:99:1013,0,181	0/0:30,0:30:90.30:0,90,2327	0/1:13,14:27:99:1898,0,108	0/1:15,4:19:54.32:885,0,54	0/1:4,2:6:15.95:286,0,16	0/1:16,8:24:56.36:1451,0,56	0/1:27,9:36:99:1987,0,268	0/1:11,2:13:99:291,0,111	0/1:16,8:25:7.28:1336,0,7	0/0:23,0:23:66.23:0,66,1741	0/0:12,0:12:30.10:0,30,733	0/1:23,16:38:99:2449,0,185	0/1:26,11:37:99:2591,0,145	0/1:18,16:34:99:2292,0,167	0/1:9,4:13:92.88:642,0,93
chr10	8931578	.	G	GAA	4336.04	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-6.354;DP=615;FS=3.695;HRun=7;HaplotypeScore=119.5041;InbreedingCoeff=0.9892;MQ=81.35;MQ0=0;MQRankSum=1.731;QD=34.69;ReadPosRankSum=0.368;VQSLOD=3.9714;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:48.13:0,48,557	0/0:10,0:10:24.06:0,24,280	0/0:27,0:27:42.84:0,43,478	0/0:21,0:24:12.68:0,13,438	0/0:27,0:27:48.02:0,48,531	0/0:34,0:34:87.24:0,87,1009	0/0:16,0:16:45.13:0,45,524	0/0:40,0:40:99:0,102,1147	0/0:17,0:17:36.08:0,36,419	1/1:3,25:29:69.22:1107,69,0	1/1:4,24:29:71.90:942,72,0	0/0:13,0:13:36.10:0,36,419	0/0:28,0:28:78.18:0,78,875	0/0:14,0:14:39.11:0,39,451	1/1:1,25:27:57.19:935,57,0	0/0:18,0:18:42.10:0,42,486	0/0:14,0:14:36.08:0,36,408	0/0:7,0:7:14.95:0,15,143	0/0:12,0:12:30.05:0,30,324	0/0:27,0:27:63.16:0,63,733	0/0:12,0:12:36.11:0,36,419	0/0:28,0:28:57.13:0,57,664	1/1:5,21:27:57.62:890,58,0	1/1:0,12:13:30.06:463,30,0	0/0:26,0:26:66.14:0,66,744	0/0:31,0:31:83.59:0,84,949	0/0:22,0:22:51.05:0,51,563	0/0:24,0:24:69.15:0,69,786
chr10	8932904	.	CG	C	7013.96	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=14.583;DP=756;FS=4.730;HRun=1;HaplotypeScore=73.9799;InbreedingCoeff=0.9096;MQ=77.80;MQ0=0;MQRankSum=-2.076;QD=37.51;ReadPosRankSum=1.407;VQSLOD=5.4352;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,41:41:99:1678,120,0	0/0:9,0:9:27.09:0,27,431	0/0:19,0:19:7.95:0,8,614	0/1:13,0:13:7.54:8,0,294	1/1:0,25:25:66.22:922,66,0	1/1:0,29:29:87.29:1217,87,0	1/1:0,23:23:69.23:965,69,0	0/0:35,0:35:99:0,105,1649	0/0:29,0:29:87.30:0,87,1390	0/0:27,0:27:81.28:0,81,1290	0/0:26,0:26:78.27:0,78,1246	0/0:36,0:36:99:0,108,1696	0/0:36,0:36:99:0,105,1619	0/0:38,0:38:99:0,114,1811	0/0:44,0:44:99:0,132,2080	1/1:0,21:21:63.21:881,63,0	0/0:22,0:22:63.21:0,63,1006	1/1:0,9:9:27.09:378,27,0	0/0:25,0:25:66.17:0,66,996	0/0:29,0:29:87.30:0,87,1385	0/0:32,0:32:96.31:0,96,1510	0/0:22,0:22:66.21:0,66,1031	0/0:26,0:26:78.27:0,78,1243	0/0:33,0:33:96.27:0,96,1480	1/1:0,26:26:69.23:965,69,0	0/0:35,0:35:99:0,105,1677	0/0:31,0:31:93.32:0,93,1485	0/0:15,0:15:45.15:0,45,708
chr10	8933264	.	A	AG	26327.34	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=2.325;DP=731;FS=0.000;HRun=2;HaplotypeScore=112.3583;InbreedingCoeff=0.9953;MQ=88.51;MQ0=0;MQRankSum=-10.697;QD=38.77;ReadPosRankSum=6.614;VQSLOD=3.8617;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,24:27:69.23:992,69,0	1/1:1,9:10:27.09:389,27,0	0/0:34,0:34:83.42:0,83,1045	0/0:18,0:18:44.63:0,45,524	1/1:1,42:43:99:1743,123,0	1/1:2,32:34:90.22:1270,90,0	1/1:1,23:24:69.23:994,69,0	1/1:2,33:35:99:1387,99,0	1/1:0,28:28:81.27:1165,81,0	1/1:3,25:27:81.21:1114,81,0	1/1:0,19:19:48.16:689,48,0	1/1:2,26:28:72.24:1037,72,0	1/1:3,24:27:71.12:1016,71,0	1/1:0,17:17:48.16:691,48,0	1/1:1,41:42:99:1599,111,0	1/1:2,31:33:84.28:1210,84,0	1/1:2,17:19:48.16:691,48,0	1/1:0,21:21:60.20:863,60,0	1/1:1,17:18:54.18:773,54,0	1/1:0,27:27:72.24:1031,72,0	1/1:2,26:28:63.21:907,63,0	1/1:2,28:30:81.27:1166,81,0	1/1:0,18:18:48.05:663,48,0	1/1:1,22:23:63.21:907,63,0	1/1:1,31:31:93.31:1330,93,0	1/1:2,24:26:72.22:1018,72,0	1/1:0,36:36:99:1425,99,0	1/1:0,6:6:18.06:257,18,0
chr10	8933747	.	ATG	A	3830.85	PASS	AB=0.909;AC=15;AF=0.268;AN=56;BaseQRankSum=3.158;DP=832;FS=4.149;HRun=0;HaplotypeScore=161.4845;InbreedingCoeff=0.7804;MQ=57.78;MQ0=8;MQRankSum=8.547;QD=17.90;ReadPosRankSum=3.161;VQSLOD=3.8203;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,15:26:6.61:406,7,0	0/0:7,0:11:12:0,12,105	0/0:38,0:23:27.07:0,27,391	0/0:32,0:21:12.51:0,13,180	1/1:4,19:25:53.82:580,54,0	1/1:6,23:30:63.02:707,63,0	1/1:10,15:25:1.09:378,1,0	0/0:43,0:50:70.30:0,70,804	0/0:13,0:26:26.56:0,27,239	0/0:29,1:30:28.53:0,29,865	0/1:18,2:20:21.30:21,0,605	0/0:18,0:28:26.99:0,27,235	0/0:25,0:43:44.96:0,45,386	0/0:19,0:34:36:0,36,332	0/0:49,5:54:13.36:0,13,1522	1/1:10,25:35:48.31:774,48,0	0/0:18,0:21:18.76:0,19,164	1/1:11,7:18:4.11:223,4,0	0/0:9,0:11:11.99:0,12,112	0/0:15,0:24:14.70:0,15,132	0/0:31,0:31:6:0,6,54	0/0:29,0:39:20.99:0,21,182	0/0:21,0:21:39.13:0,39,606	0/0:26,0:26:54.15:0,54,838	1/1:11,23:34:66.03:742,66,0	0/0:26,0:32:63.63:0,64,781	0/0:29,0:41:42.42:0,42,388	0/0:13,0:23:40.75:0,41,377
chr10	8934166	.	AGTGTGTGTGTGTGTGT	A	1562.07	PASS	AB=0.781;AC=19;AF=0.475;AN=40;BaseQRankSum=4.036;DP=622;FS=1.348;HRun=0;HaplotypeScore=226.2097;InbreedingCoeff=0.4156;MQ=68.79;MQ0=16;MQRankSum=-2.735;QD=7.66;ReadPosRankSum=0.724;VQSLOD=2.3408;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:44:3.01:0,3,143	1/1:5,5:10:3.01:130,3,0	./.	./.	./.	0/0:13,0:13:3.01:0,3,91	0/0:25,0:24:15.52:0,16,623	0/0:34,0:34:0.89:0,1,2	1/1:11,0:19:9.03:335,9,0	0/0:16,0:16:1.25:0,1,4	./.	1/1:13,9:22:2.71:129,3,0	./.	1/1:21,5:24:3.01:130,3,0	1/1:19,1:20:6.02:208,6,0	0/0:20,0:25:9.50:0,10,322	./.	0/0:13,0:14:23.67:0,24,931	./.	1/1:18,6:23:3.01:39,3,0	0/0:36,0:34:0:0,0,0	1/1:22,4:26:6.02:169,6,0	./.	0/1:18,7:25:35.25:109,0,35	0/0:18,0:16:3.01:0,3,70	0/0:16,0:16:0.47:0,0,1	1/1:11,7:17:2.21:128,2,0	1/1:12,0:14:9.03:312,9,0
chr10	8934373	.	A	AGG	1438.67	PASS	AB=0.902;AC=20;AF=0.357;AN=56;BaseQRankSum=10.768;DP=511;FS=3.856;HRun=3;HaplotypeScore=92.4562;InbreedingCoeff=0.3768;MQ=47.36;MQ0=42;MQRankSum=4.101;QD=6.02;ReadPosRankSum=0.386;VQSLOD=0.1080;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:32:33.05:0,33,418	1/1:2,0:2:3:27,3,0	0/0:15,0:5:12:0,12,110	0/0:27,0:9:14.96:0,15,141	0/0:13,0:12:26.28:0,26,196	0/1:17,0:17:0.79:1,0,171	0/0:17,0:17:20.88:0,21,170	0/1:35,0:30:34.22:34,0,290	0/0:24,0:24:34.60:0,35,380	0/0:14,0:13:32.33:0,32,251	0/0:25,0:24:36.36:0,36,314	1/1:21,0:20:31.87:300,32,0	0/1:9,10:18:41.22:42,0,41	1/1:15,0:14:15.86:156,16,0	0/0:14,0:12:25.59:0,26,190	0/0:18,0:17:28.77:0,29,317	0/1:5,15:19:18.16:47,0,18	0/0:12,0:8:14.87:0,15,111	0/1:15,0:15:74.07:74,0,104	1/1:13,0:12:22.82:166,23,0	1/1:14,0:13:11.99:103,12,0	1/1:7,0:6:3.47:28,3,0	0/0:19,0:18:37.80:0,38,290	0/0:26,0:24:25.42:0,25,208	0/0:14,0:10:20.98:0,21,177	0/1:18,0:17:5.61:280,0,6	0/1:23,0:22:26.82:289,0,27	0/1:19,0:10:4.09:74,0,4
chr10	8934375	.	G	GGA	213.02	PASS	AB=0.947;AC=20;AF=0.526;AN=38;BaseQRankSum=-1.059;DP=519;FS=8.808;HRun=0;HaplotypeScore=102.5222;InbreedingCoeff=0.2169;MQ=46.91;MQ0=41;MQRankSum=0.866;QD=0.69;ReadPosRankSum=1.251;VQSLOD=1.4580;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:30,5:35:32.29:32,0,35	./.	./.	./.	0/1:13,0:13:0:0,0,0	1/1:17,1:18:8.44:107,8,0	./.	1/1:37,0:32:0.47:2,0,0	0/0:24,0:24:17.61:0,18,155	0/1:14,0:13:0.99:1,0,1	1/1:25,0:24:6:54,6,0	0/0:20,0:20:2.31:0,2,36	0/1:20,0:18:19.13:23,0,19	0/0:16,0:15:8.92:0,9,64	1/1:15,0:13:5.87:39,6,0	1/1:18,1:18:3.01:38,3,0	0/1:20,0:19:22.93:23,0,25	./.	./.	./.	./.	0/0:7,0:6:3:0,3,25	0/1:18,0:18:0:0,0,0	0/1:20,7:27:0:0,0,0	./.	0/1:19,0:18:0:0,0,0	1/1:24,0:23:0.47:1,0,0	0/0:19,0:10:2.20:0,2,7
chr10	8935899	.	ACG	A	10626.61	PASS	AB=1.000;AC=44;AF=0.786;AN=56;BaseQRankSum=0.788;DP=682;FS=8.899;HRun=0;HaplotypeScore=132.9120;InbreedingCoeff=0.4399;MQ=65.61;MQ0=10;MQRankSum=1.100;QD=17.22;ReadPosRankSum=1.699;VQSLOD=4.3710;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,33:36:40.79:712,41,0	1/1:1,10:11:21.07:267,21,0	0/0:14,0:7:2.82:0,3,14	0/0:16,0:9:7.51:0,8,60	1/1:6,14:19:36.08:429,36,0	1/1:6,13:19:20.64:267,21,0	1/1:11,20:31:2.73:314,3,0	1/1:10,19:29:42.57:550,43,0	0/0:18,0:18:33.34:0,33,174	0/1:23,0:23:99:155,0,105	0/1:22,0:20:25.68:26,0,28	1/1:4,36:39:78.22:963,78,0	1/1:7,17:24:48.13:589,48,0	1/1:5,19:24:39.11:482,39,0	0/1:23,0:23:22.97:23,0,100	1/1:3,18:21:10.70:359,11,0	1/1:6,17:22:41.99:480,42,0	1/1:5,17:22:36.08:429,36,0	1/1:15,3:17:29.98:282,30,0	1/1:4,21:25:39.08:478,39,0	1/1:33,24:57:99:1380,129,0	1/1:7,27:33:42.13:535,42,0	0/0:17,0:17:4.79:0,5,145	0/1:36,0:33:58.12:58,0,86	1/1:4,17:22:30.10:382,30,0	1/1:3,23:25:68.85:744,69,0	1/1:4,13:17:30.08:366,30,0	1/1:3,10:13:29.93:357,30,0
chr10	8935909	.	GCGCA	G	1605.37	PASS	AB=0.928;AC=15;AF=0.268;AN=56;BaseQRankSum=-5.237;DP=689;FS=0.906;HRun=0;HaplotypeScore=186.5192;InbreedingCoeff=-0.3797;MQ=61.87;MQ0=13;MQRankSum=2.191;QD=3.90;ReadPosRankSum=-4.795;VQSLOD=0.6245;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:36,2:37:81.83:82,0,204	0/0:12,0:12:18.12:0,18,87	0/0:14,0:3:2.84:0,3,14	0/0:22,0:8:10.91:0,11,97	0/1:21,2:22:68.83:69,0,194	0/0:17,1:18:22.25:0,22,111	0/0:27,0:27:8.68:0,9,245	0/1:25,1:26:99:280,0,183	0/1:19,0:19:58.90:206,0,59	0/1:27,4:31:99:186,0,267	0/1:20,2:20:24.41:24,0,61	0/1:36,2:37:50.57:51,0,162	0/1:21,1:22:28.36:28,0,137	0/1:26,0:26:7.11:7,0,210	0/0:26,0:26:30.59:0,31,191	0/0:19,0:19:28.91:0,29,145	0/1:24,2:25:99:104,0,141	0/1:22,2:24:99:129,0,141	0/1:8,7:13:82.77:183,0,83	0/0:24,2:25:1.51:0,2,80	0/1:54,3:58:99:272,0,355	0/0:31,0:30:41.92:0,42,184	0/0:15,0:15:29.63:0,30,245	0/0:33,1:31:19.21:0,19,217	0/0:22,0:22:37.86:0,38,215	0/1:26,1:26:99:133,0,119	0/1:16,0:17:1.93:2,0,125	0/0:11,0:11:10.64:0,11,62
chr10	8935911	.	GCA	G	4433.22	PASS	AB=0.998;AC=36;AF=0.643;AN=56;BaseQRankSum=11.509;DP=698;FS=7.108;HRun=0;HaplotypeScore=160.1026;InbreedingCoeff=-0.3262;MQ=60.10;MQ0=13;MQRankSum=0.047;QD=6.70;ReadPosRankSum=11.427;VQSLOD=2.0942;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:41,0:40:27.84:241,0,28	0/1:13,0:13:22.49:70,0,22	0/0:13,0:2:0:0,0,0	0/0:23,0:8:5.87:0,6,34	0/1:23,0:22:95.75:125,0,96	0/1:19,0:19:42.77:64,0,43	0/1:27,0:27:77.97:78,0,126	0/1:26,0:26:66:66,0,148	1/1:6,0:20:26.45:127,26,0	1/1:15,11:29:68.45:633,68,0	1/1:7,15:20:14.71:151,15,0	1/1:38,0:37:73.76:375,74,0	1/1:22,0:22:13.48:227,13,0	0/1:26,0:26:91.90:133,0,92	1/1:12,10:23:15.01:164,15,0	0/1:19,0:19:16.48:99,0,16	0/1:27,1:27:20.73:222,0,21	0/1:25,0:25:48.88:166,0,49	0/1:19,0:17:42.84:43,0,105	1/1:27,0:26:15.67:159,16,0	0/1:56,0:56:71.47:289,0,71	0/1:30,0:29:4.52:145,0,5	1/1:9,6:15:6.02:69,6,0	1/1:19,15:32:26.70:307,27,0	0/1:22,0:22:59.90:92,0,60	0/1:29,0:28:53.21:140,0,53	0/1:17,0:17:36.22:115,0,36	1/1:11,0:11:25.38:134,25,0
chr10	8935945	.	T	TCA	1805.44	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=1.306;DP=689;FS=2.028;HRun=0;HaplotypeScore=167.8662;InbreedingCoeff=0.9431;MQ=59.52;MQ0=6;MQRankSum=-5.395;QD=15.70;ReadPosRankSum=0.807;VQSLOD=3.8135;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:84.22:0,84,1046	0/0:14,0:14:42.12:0,42,521	0/0:33,1:22:51.21:0,51,606	0/0:33,0:19:31.29:0,31,451	0/0:19,0:19:48.15:0,48,609	0/0:21,0:21:38.92:0,39,483	0/0:32,0:32:63.15:0,63,753	0/0:17,0:17:42.13:0,42,534	0/0:13,0:13:21.07:0,21,267	1/1:6,26:32:84.29:1395,84,0	1/1:1,20:21:11.96:201,12,0	0/0:31,0:31:57.13:0,57,712	0/0:22,0:22:60.19:0,60,763	0/0:21,0:21:54.17:0,54,687	1/1:2,17:19:9.03:150,9,0	0/0:20,0:20:51.16:0,51,649	0/0:30,0:29:68.02:0,68,835	0/0:27,0:27:71.60:0,72,889	0/0:23,0:21:45.13:0,45,552	0/0:24,0:24:51.16:0,51,645	0/0:39,0:39:72.02:0,72,915	0/0:26,0:26:45.14:0,45,573	1/1:5,7:12:5.99:50,6,0	1/1:11,20:28:11.47:170,11,0	0/0:21,0:22:47.91:0,48,610	0/0:27,0:27:72.23:0,72,910	0/0:27,0:26:66.19:0,66,840	0/0:13,0:13:23.56:0,24,275
chr10	8935980	.	CT	C	1274.88	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=8.895;DP=621;FS=6.329;HRun=11;HaplotypeScore=108.7073;InbreedingCoeff=0.9445;MQ=75.53;MQ0=2;MQRankSum=-2.143;QD=13.01;ReadPosRankSum=-1.274;VQSLOD=3.0019;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:81.19:0,81,856	0/0:15,0:16:38.94:0,39,388	0/0:33,1:27:24.43:0,24,289	0/0:25,0:19:14.48:0,14,101	0/0:14,0:14:36.09:0,36,384	0/0:22,1:23:32.48:0,32,537	0/0:23,0:23:54.05:0,54,560	0/0:23,0:24:60.02:0,60,622	0/0:13,0:13:21.52:0,22,225	1/1:7,16:23:47.91:391,48,0	1/1:7,8:15:20.96:172,21,0	0/0:24,0:24:35.49:0,35,570	0/0:19,0:19:42.09:0,42,441	0/0:24,0:24:57.14:0,57,608	1/1:7,18:25:53.90:443,54,0	0/0:19,1:20:23.48:0,23,455	0/0:29,0:28:63.16:0,63,670	0/0:32,1:33:50.46:0,50,728	0/0:20,1:21:14.44:0,14,347	0/0:21,0:21:45.10:0,45,472	0/0:26,0:27:62.95:0,63,634	0/0:10,0:10:30.05:0,30,305	1/1:2,13:16:26.81:221,27,0	1/1:6,13:18:26.38:221,26,0	0/0:21,1:22:20.47:0,20,423	0/0:22,0:23:41.27:0,41,473	0/0:34,0:33:84.18:0,84,884	0/0:8,1:9:2.42:0,2,231
chr10	8938147	.	TG	T	10787.27	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=17.088;DP=773;FS=0.271;HRun=5;HaplotypeScore=72.8989;InbreedingCoeff=0.9994;MQ=79.86;MQ0=0;MQRankSum=-3.032;QD=30.47;ReadPosRankSum=-0.480;VQSLOD=5.0518;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,105,1419	1/1:1,15:16:45.13:510,45,0	0/0:22,0:22:50.83:0,51,663	0/0:16,0:16:42.12:0,42,544	0/0:41,0:41:99:0,114,1550	0/0:26,0:26:72.23:0,72,969	0/0:22,0:22:63.21:0,63,861	1/1:3,31:34:90.24:1011,90,0	0/0:25,0:25:69.23:0,69,941	0/0:31,0:31:84.27:0,84,1134	0/0:27,0:27:75.25:0,75,1022	1/1:2,26:28:75.21:850,75,0	1/1:1,29:30:81.23:918,81,0	1/1:0,26:26:75.21:851,75,0	0/0:25,0:25:72.24:0,72,984	0/0:36,0:36:99:0,102,1381	1/1:1,21:22:60.17:681,60,0	0/0:21,0:21:63.21:0,63,862	1/1:1,26:27:78.15:847,78,0	1/1:2,34:36:96.24:1075,96,0	1/1:2,28:30:78.22:879,78,0	1/1:1,26:27:81.15:899,81,0	0/0:30,0:30:78.26:0,78,1066	0/0:27,0:27:75.24:0,75,1011	0/0:28,0:28:81.26:0,81,1082	1/1:4,29:33:49.20:938,49,0	1/1:1,34:35:96.27:1089,96,0	1/1:1,9:10:21.06:238,21,0
chr10	8939134	.	G	GAA	7884.96	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-11.928;DP=637;FS=9.386;HRun=11;HaplotypeScore=91.3690;InbreedingCoeff=0.9985;MQ=76.86;MQ0=0;MQRankSum=-0.797;QD=27.10;ReadPosRankSum=-1.987;VQSLOD=3.7598;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:22:43.88:0,44,190	1/1:0,13:14:38.62:529,39,0	0/0:24,0:22:32.19:0,32,256	0/0:16,0:13:19.67:0,20,138	0/0:6,0:30:62.87:0,63,270	0/0:6,0:30:57.85:0,58,266	0/0:1,0:17:41.09:0,41,177	1/1:5,22:29:45.08:919,45,0	0/0:20,0:20:41.95:0,42,407	0/0:31,0:32:77.74:0,78,723	0/0:28,0:28:78.07:0,78,756	1/1:2,13:16:32.88:463,33,0	1/1:5,15:23:41.62:543,42,0	1/1:4,14:19:36.49:489,36,0	0/0:21,0:21:54.02:0,54,513	0/0:5,0:18:35.65:0,36,154	1/1:3,21:28:52.63:663,53,0	0/0:2,0:19:40.92:0,41,178	1/1:7,6:16:35.07:418,35,0	1/1:1,19:24:67.59:819,68,0	1/1:7,5:12:21.05:270,21,0	1/1:10,23:34:62.46:852,62,0	0/0:18,0:20:44.72:0,45,462	0/0:21,0:25:41.63:0,42,489	0/0:1,0:22:52.08:0,52,224	1/1:4,18:23:53.58:650,54,0	1/1:9,8:21:49.06:557,49,0	1/1:7,22:32:53.15:713,53,0
chr10	8939694	.	GT	G	4316.51	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=11.300;DP=618;FS=1.994;HRun=8;HaplotypeScore=62.2920;InbreedingCoeff=0.9994;MQ=84.89;MQ0=0;MQRankSum=-3.259;QD=24.67;ReadPosRankSum=2.390;VQSLOD=5.7520;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,26:27:72.11:695,72,0	0/0:9,0:9:27.08:0,27,326	0/0:15,0:15:36.11:0,36,424	0/0:25,0:25:59.50:0,60,653	1/1:0,26:26:75.12:724,75,0	1/1:4,28:31:81.11:782,81,0	1/1:2,17:19:42.06:406,42,0	0/0:32,0:31:84.26:0,84,1014	1/1:3,10:13:30.05:290,30,0	0/0:25,0:25:72.17:0,72,843	0/0:16,0:16:42.12:0,42,497	0/0:25,0:25:72.21:0,72,856	0/0:23,0:23:69.21:0,69,832	0/0:26,0:26:75.23:0,75,900	0/0:33,0:33:84.22:0,84,984	1/1:1,18:19:51.08:493,51,0	0/0:39,0:39:99:0,111,1329	1/1:0,14:14:36.06:348,36,0	0/0:23,0:22:60.17:0,60,714	0/0:22,0:22:54.15:0,54,638	0/0:10,0:10:27.08:0,27,326	0/0:11,0:12:29.96:0,30,341	0/0:21,0:21:57.17:0,57,688	0/0:16,0:16:45.14:0,45,544	1/1:1,24:25:60.10:579,60,0	0/0:30,0:30:81.25:0,81,977	0/0:27,0:26:81.25:0,81,976	0/0:14,0:14:42.13:0,42,507
chr10	8940585	.	AT	A	14294.73	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-5.353;DP=599;FS=5.470;HRun=8;HaplotypeScore=68.7727;InbreedingCoeff=0.9985;MQ=71.09;MQ0=0;MQRankSum=-7.593;QD=25.26;ReadPosRankSum=5.941;VQSLOD=5.2158;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:3,36:39:95.19:980,95,0	1/1:2,12:14:36.06:348,36,0	0/0:19,0:19:41.93:0,42,456	0/0:14,0:14:24.54:0,25,283	1/1:1,23:24:69.11:666,69,0	1/1:1,23:24:66.11:643,66,0	1/1:2,20:22:57.09:550,57,0	1/1:9,25:34:72.09:689,72,0	1/1:2,16:18:48.07:462,48,0	1/1:2,11:13:33.05:319,33,0	1/1:4,17:21:54.07:517,54,0	1/1:1,12:13:36.05:348,36,0	1/1:1,26:27:75.12:723,75,0	1/1:1,20:21:60.10:579,60,0	1/1:2,16:18:45.07:434,45,0	1/1:1,16:17:39.06:377,39,0	1/1:5,26:31:72.11:695,72,0	1/1:1,12:13:36.06:348,36,0	1/1:3,22:25:66.10:637,66,0	1/1:1,27:28:81.13:781,81,0	1/1:2,14:16:39.06:377,39,0	1/1:0,15:15:45.07:436,45,0	1/1:3,11:14:36.06:347,36,0	1/1:4,25:29:66.11:640,66,0	1/1:2,20:22:60.10:579,60,0	1/1:2,24:26:72.11:695,72,0	1/1:1,26:27:78.11:749,78,0	1/1:2,13:15:39.06:377,39,0
chr10	8940664	.	GTTTTTTT	G	18494.48	PASS	AB=0.679;AC=48;AF=0.857;AN=56;BaseQRankSum=0.447;DP=605;FS=5.818;HRun=16;HaplotypeScore=192.4298;InbreedingCoeff=0.1360;MQ=65.06;MQ0=2;MQRankSum=-7.684;QD=31.83;ReadPosRankSum=8.727;VQSLOD=0.9663;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,0:14:7.18:151,7,0	1/1:1,5:7:18:318,18,0	0/0:24,0:17:30.04:0,30,652	0/1:24,0:20:6.36:6,0,437	0/1:8,0:27:79.46:214,0,79	1/1:10,0:23:35.12:246,35,0	0/1:7,0:21:22.03:137,0,22	1/1:11,18:30:20.54:837,21,0	1/1:4,18:22:60.16:1196,60,0	1/1:1,21:23:63.04:1210,63,0	1/1:4,25:29:53.48:1102,53,0	1/1:2,22:24:60.10:1188,60,0	1/1:6,25:32:75:1484,75,0	1/1:3,19:22:54.05:1104,54,0	1/1:1,17:18:51.18:1041,51,0	0/1:5,0:20:43.49:235,0,43	1/1:5,5:10:8.79:184,9,0	0/1:8,0:12:54.97:60,0,55	1/1:8,11:19:44.68:790,45,0	1/1:3,28:32:71.90:1451,72,0	1/1:3,4:7:5.83:122,6,0	1/1:7,23:31:65.96:1326,66,0	1/1:5,0:32:53.80:738,54,0	1/1:5,0:12:14.26:205,14,0	0/1:9,1:27:31.62:296,0,32	1/1:4,19:23:57.05:1165,57,0	1/1:10,22:33:64.99:1393,65,0	1/1:0,5:5:15.05:296,15,0
chr10	8941410	.	C	CT	22381.16	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-8.889;DP=590;FS=1.399;HRun=1;HaplotypeScore=48.4847;InbreedingCoeff=0.9985;MQ=80.55;MQ0=0;MQRankSum=-8.813;QD=40.77;ReadPosRankSum=6.991;VQSLOD=4.3197;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,11:12:33.11:494,33,0	1/1:0,13:13:39.13:583,39,0	0/0:21,0:21:50.26:0,50,630	0/0:20,0:20:56.68:0,57,634	1/1:0,26:26:78.26:1162,78,0	1/1:2,15:17:42.14:629,42,0	1/1:0,15:15:39.13:584,39,0	1/1:4,42:45:99:1765,123,0	1/1:0,25:25:72.24:1078,72,0	1/1:2,28:30:84.28:1259,84,0	1/1:1,14:15:42.06:601,42,0	1/1:0,20:20:57.19:854,57,0	1/1:0,33:33:93.32:1393,93,0	1/1:1,15:16:42.14:629,42,0	1/1:0,26:26:66.22:989,66,0	1/1:1,30:31:84.28:1259,84,0	1/1:0,18:18:51.17:763,51,0	1/1:0,18:18:48.16:719,48,0	1/1:0,12:12:36.12:538,36,0	1/1:0,25:25:72.21:1043,72,0	1/1:1,12:13:36.12:539,36,0	1/1:1,15:16:45.15:674,45,0	1/1:0,20:20:51.17:763,51,0	1/1:1,9:10:24.08:360,24,0	1/1:0,22:22:57.19:847,57,0	1/1:1,25:26:75.24:1103,75,0	1/1:0,30:30:81.27:1213,81,0	1/1:0,14:14:36.12:539,36,0
chr10	8941821	.	A	AAC	192.73	PASS	AB=0.986;AC=17;AF=0.304;AN=56;BaseQRankSum=1.833;DP=480;FS=4.031;HRun=0;HaplotypeScore=196.4690;InbreedingCoeff=-0.1678;MQ=26.40;MQ0=20;MQRankSum=1.267;QD=0.72;ReadPosRankSum=-3.272;VQSLOD=2.2205;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:17,0:16:11.15:11,0,48	0/0:5,0:5:5.27:0,5,25	0/0:40,0:2:3.01:0,3,38	0/0:25,0:2:9.01:0,9,99	0/1:18,0:17:6.78:7,0,7	0/1:24,1:24:46.45:46,0,52	0/1:11,0:11:3.28:11,0,3	0/1:37,0:30:2.99:3,0,409	0/1:13,0:13:9.62:60,0,10	0/0:24,0:23:0.83:0,1,178	0/1:17,1:17:0.03:0,0,1	0/1:17,1:18:29.34:29,0,30	0/1:18,0:16:26.81:27,0,67	0/0:24,1:23:0.17:0,0,53	0/0:9,0:7:4.70:0,5,32	0/1:17,0:17:34.62:35,0,88	0/0:6,0:6:4.44:0,4,47	0/0:9,0:8:16.56:0,17,92	0/0:21,0:20:1.81:0,2,254	1/1:17,0:15:5.05:24,5,0	1/1:12,0:11:1.74:4,2,0	0/0:19,0:19:4.35:0,4,13	0/0:18,0:18:1.01:0,1,3	0/0:8,0:8:2.13:0,2,10	0/1:12,0:12:4.35:8,0,4	0/1:22,1:23:31.74:32,0,262	0/1:12,0:10:27.48:27,0,72	0/0:2,0:2:4.26:0,4,13
chr10	8941822	.	CA	C	1286.52	PASS	AB=0.968;AC=25;AF=0.446;AN=56;BaseQRankSum=0.376;DP=482;FS=6.639;HRun=2;HaplotypeScore=188.7618;InbreedingCoeff=-0.0559;MQ=26.35;MQ0=20;MQRankSum=0.396;QD=3.85;ReadPosRankSum=-0.725;VQSLOD=-0.1635;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:17,0:16:23.61:24,0,37	1/1:4,1:5:5.27:24,5,0	0/0:41,0:2:3.01:0,3,39	0/0:26,0:2:9.03:0,9,123	0/1:17,1:17:4.03:4,0,9	1/1:23,2:24:6.30:217,6,0	0/1:12,0:11:2.16:37,0,2	0/1:31,6:30:99:122,0,111	1/1:13,0:13:16.57:164,17,0	0/1:23,1:23:83.81:84,0,95	0/0:17,1:17:3.44:0,3,14	0/1:16,2:18:1.96:137,0,2	0/1:18,0:16:2.95:65,0,3	0/1:25,0:23:0.62:81,0,1	0/0:9,0:7:1.13:0,1,8	0/1:17,0:17:42.91:115,0,43	0/0:6,0:6:2.12:0,2,42	0/1:9,0:8:1.78:82,0,2	0/0:21,0:20:9.75:0,10,174	1/1:17,0:15:2.57:62,3,0	1/1:12,0:11:1.89:36,2,0	0/0:16,3:19:3.52:0,4,12	0/1:18,0:18:2.11:4,0,2	0/0:8,0:8:4.13:0,4,15	0/1:10,2:12:3.60:42,0,4	0/1:23,0:23:63.34:63,0,146	0/1:12,0:10:20.66:56,0,21	0/1:2,0:2:0.44:13,0,0
chr10	8941823	.	A	AACCAC	4639.80	PASS	AB=0.842;AC=32;AF=0.571;AN=56;BaseQRankSum=-2.382;DP=500;FS=7.514;HRun=0;HaplotypeScore=193.5609;InbreedingCoeff=-0.1555;MQ=26.26;MQ0=24;MQRankSum=1.439;QD=11.10;ReadPosRankSum=1.433;VQSLOD=3.4966;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:11,1:17:9.49:139,0,9	0/1:4,0:5:4.21:14,0,4	0/0:41,0:2:3.01:0,3,44	0/0:29,0:3:9.03:0,9,180	0/1:5,3:17:5.17:9,0,5	1/1:10,6:24:21.14:427,21,0	1/1:5,3:11:1.77:97,2,0	0/1:29,0:31:99:327,0,252	1/1:5,4:13:9.76:265,10,0	0/1:18,2:24:25.44:431,0,25	0/1:12,1:17:0.15:5,0,0	0/1:13,4:18:0.20:269,0,0	0/1:12,4:18:11.51:181,0,12	1/1:15,4:23:10.75:119,11,0	0/0:6,1:7:2.52:0,3,21	1/1:7,5:17:16.30:475,16,0	0/1:3,3:6:18.93:80,0,19	0/1:3,1:8:28.45:61,0,28	0/1:18,1:23:99:605,0,105	1/1:14,2:15:5.95:126,6,0	1/1:13,1:12:3.48:51,3,0	0/1:18,0:19:4.58:8,0,5	1/1:12,2:18:2.70:20,3,0	0/1:6,1:8:0.01:0,0,0	0/1:5,1:12:13.46:52,0,13	0/1:17,4:24:99:637,0,141	0/1:7,3:10:21.73:241,0,22	0/0:2,0:2:5.33:0,5,27
chr10	8941825	.	C	CA	1594.55	PASS	AB=0.879;AC=33;AF=0.589;AN=56;BaseQRankSum=2.287;DP=543;FS=6.683;HRun=2;HaplotypeScore=212.1060;InbreedingCoeff=0.0646;MQ=26.46;MQ0=25;MQRankSum=1.495;QD=3.86;ReadPosRankSum=-0.032;VQSLOD=-0.0507;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:14,3:17:1.48:1,0,43	1/1:5,2:7:4.23:50,4,0	0/0:42,0:2:3.01:0,3,41	0/0:31,0:3:12.01:0,12,145	0/0:18,0:19:6.77:0,7,26	0/1:23,1:25:26.30:43,0,26	0/1:13,1:14:4.64:17,0,5	0/1:26,6:32:70.78:231,0,71	1/1:15,1:16:15.66:113,16,0	0/1:19,6:25:65.69:288,0,66	0/0:16,4:21:2.43:0,2,8	1/1:14,5:19:11.84:70,12,0	1/1:20,0:18:15.80:106,16,0	1/1:25,2:25:9.10:73,9,0	1/1:5,4:8:3.73:13,4,0	0/1:17,1:18:19.33:88,0,19	0/0:6,0:6:6.64:0,7,47	0/1:8,1:9:1.53:62,0,2	0/1:19,2:27:90.19:90,0,141	1/1:18,2:17:1.77:5,2,0	0/1:12,2:13:0.68:1,0,1	1/1:14,5:20:0.09:3,0,0	1/1:18,1:20:1.48:9,1,0	0/0:5,3:9:0.16:0,0,1	1/1:10,2:13:6.09:94,6,0	0/1:20,7:27:78.33:296,0,78	0/1:11,2:11:4.86:32,0,5	1/1:0,2:2:5.75:59,6,0
chr10	8941833	.	AC	A	1329.23	PASS	AB=0.913;AC=21;AF=0.375;AN=56;BaseQRankSum=0.768;DP=617;FS=10.844;HRun=2;HaplotypeScore=216.8860;InbreedingCoeff=-0.2210;MQ=27.86;MQ0=28;MQRankSum=-1.227;QD=3.65;ReadPosRankSum=3.936;VQSLOD=-0.5961;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:18:13.15:0,13,142	0/1:8,1:9:1.06:1,0,19	0/0:46,0:2:3.01:0,3,40	0/0:39,0:6:18.05:0,18,217	0/1:20,1:20:9.14:9,0,18	0/1:23,3:25:45.25:45,0,189	0/1:16,1:16:48.02:48,0,52	0/1:34,14:39:99:326,0,152	0/1:14,2:16:24.89:25,0,137	0/1:28,2:27:77.97:176,0,78	0/0:21,4:24:13.28:0,13,112	0/0:20,2:21:32.02:0,32,259	0/1:21,1:20:84.97:107,0,85	0/1:29,3:30:21.25:21,0,43	1/1:9,1:8:6.42:27,6,0	0/1:18,1:18:51.40:51,0,160	1/1:6,0:6:5.54:34,6,0	0/1:8,2:9:1.98:132,0,2	0/1:27,5:31:77.35:246,0,77	0/0:21,3:21:25.54:0,26,181	0/0:18,0:17:11.76:0,12,84	0/0:17,6:22:13.20:0,13,94	0/0:22,3:24:6.32:0,6,67	0/0:10,0:10:1.62:0,2,26	0/1:17,0:17:42.49:42,0,81	0/1:30,2:30:99:106,0,195	0/1:12,1:11:84.01:84,0,104	1/1:3,0:3:0.42:2,0,0
chr10	8941838	.	A	AAC	820.76	PASS	AB=0.925;AC=15;AF=0.268;AN=56;BaseQRankSum=1.358;DP=661;FS=7.660;HRun=0;HaplotypeScore=236.1389;InbreedingCoeff=0.0879;MQ=29.64;MQ0=32;MQRankSum=-0.517;QD=3.43;ReadPosRankSum=-2.762;VQSLOD=1.2420;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:17,4:19:90.39:106,0,90	0/0:10,0:10:16.85:0,17,125	0/0:48,0:4:12:0,12,139	0/0:42,0:8:24.08:0,24,339	1/1:20,6:25:4.55:129,5,0	0/1:23,4:26:99:128,0,200	0/1:14,3:16:9.76:95,0,10	0/0:48,1:40:2.15:0,2,701	0/1:16,0:16:37.83:38,0,128	0/1:35,1:31:5.44:5,0,363	0/1:27,0:25:3.62:4,0,97	0/0:24,0:23:35.58:0,36,333	0/0:22,0:20:28.49:0,28,243	0/0:31,0:29:17.71:0,18,148	1/1:10,0:8:2.83:36,3,0	0/1:16,3:18:99:130,0,189	0/0:6,0:6:5.93:0,6,56	0/1:11,1:11:58.46:58,0,133	0/0:37,0:35:81.61:0,82,786	0/0:28,0:25:31.64:0,32,262	0/0:22,0:20:22.59:0,23,161	0/0:23,0:22:26.18:0,26,240	0/0:26,0:24:9.29:0,9,88	0/1:11,0:10:11.17:11,0,20	1/1:13,4:17:11.27:235,11,0	0/0:35,0:33:48.46:0,48,621	0/0:15,0:13:18.50:0,19,232	0/0:3,0:3:7.58:0,8,29
chr10	8941842	.	A	AC	1731.15	PASS	AB=0.990;AC=31;AF=0.554;AN=56;BaseQRankSum=3.745;DP=700;FS=6.615;HRun=1;HaplotypeScore=238.2717;InbreedingCoeff=-0.2774;MQ=32.72;MQ0=33;MQRankSum=0.634;QD=3.11;ReadPosRankSum=0.521;VQSLOD=-0.4346;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:19:11.76:12,0,157	1/1:11,0:11:9.04:37,9,0	0/0:51,0:6:15.04:0,15,178	0/0:47,0:10:24.08:0,24,307	0/1:28,0:27:5.72:11,0,6	0/0:27,0:26:7.35:0,7,206	1/1:17,0:16:10.44:84,10,0	0/1:51,0:42:99:126,0,462	0/1:15,0:16:43.26:43,0,72	0/1:33,5:34:99:432,0,118	1/1:28,0:26:25.61:167,26,0	0/1:24,0:23:48.20:72,0,48	0/1:22,0:20:43.18:43,0,82	1/1:31,0:29:13.65:87,14,0	1/1:12,0:10:8.88:74,9,0	0/1:19,0:18:46.77:47,0,132	0/1:7,0:7:25.34:25,0,54	0/1:13,0:12:16.13:16,0,101	0/1:37,0:34:99:241,0,303	0/1:32,0:28:29.24:29,0,102	0/1:22,0:20:11.74:12,0,61	0/1:26,0:25:28.96:29,0,94	0/1:26,1:25:9.72:10,0,57	1/1:11,1:11:12.77:68,13,0	0/0:18,0:18:1.72:0,2,34	0/1:39,0:37:99:183,0,259	0/1:17,0:15:38.05:38,0,124	1/1:5,0:5:5.41:14,5,0
chr10	8942759	.	TCAGGGTAGAGAAA	T	23832.72	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=16.454;DP=614;FS=0.738;HRun=0;HaplotypeScore=243.3305;InbreedingCoeff=0.9032;MQ=74.98;MQ0=4;MQRankSum=-16.254;QD=67.13;ReadPosRankSum=1.812;VQSLOD=4.5772;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,123,6991	1/1:3,4:7:12.04:459,12,0	0/0:20,0:20:42.14:0,42,1470	0/0:16,0:14:27.08:0,27,835	0/0:38,0:38:96.33:0,96,5435	0/0:29,0:29:69.24:0,69,4233	0/0:10,0:10:27.08:0,27,1379	1/1:13,12:25:36.12:1377,36,0	0/0:31,0:31:81.28:0,81,5019	1/1:6,18:24:54.14:1882,54,0	1/1:8,17:25:45.15:1692,45,0	1/1:10,11:21:26.85:1032,27,0	1/1:6,21:27:57.20:2179,57,0	1/1:7,15:22:42.14:1606,42,0	1/1:3,18:20:45.15:1720,45,0	0/0:31,0:31:81.26:0,81,4776	1/1:7,0:6:3.01:72,3,0	0/0:12,0:12:33.11:0,33,1822	1/1:9,11:20:33.09:1034,33,0	1/1:6,20:26:54.18:2064,54,0	1/1:6,4:10:1.17:112,1,0	1/1:5,21:26:51.17:1923,51,0	1/1:7,20:27:54.18:2064,54,0	1/1:2,8:10:9.03:314,9,0	0/0:21,0:21:54.19:0,54,3209	1/1:7,16:22:48.16:1780,48,0	1/1:9,24:33:63.22:2409,63,0	1/1:0,1:1:3.01:115,3,0
chr10	8944292	.	CATCT	C	6030.63	PASS	AB=0.973;AC=31;AF=0.554;AN=56;BaseQRankSum=-6.233;DP=734;FS=7.608;HRun=0;HaplotypeScore=216.1216;InbreedingCoeff=-0.4072;MQ=53.15;MQ0=13;MQRankSum=3.485;QD=9.10;ReadPosRankSum=-6.492;VQSLOD=1.4644;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:34,0:34:99:226,0,463	1/1:7,0:7:17.92:137,18,0	0/0:18,0:16:41.13:0,41,403	0/0:25,0:18:36.98:0,37,372	0/1:17,0:17:99:138,0,169	0/1:31,0:29:99:178,0,572	0/0:28,0:28:4.29:0,4,53	0/1:15,27:37:18.55:456,0,19	0/1:30,0:30:15.04:291,0,15	0/1:27,1:25:32.30:309,0,32	0/1:21,0:20:13.17:258,0,13	0/1:30,0:30:44.25:360,0,44	0/1:25,0:25:86.91:159,0,87	0/1:36,0:35:56.53:296,0,57	1/1:33,0:33:2.71:362,3,0	0/1:40,0:40:99:248,0,802	0/1:19,0:19:71.89:184,0,72	0/1:25,0:25:99:149,0,256	0/1:20,0:16:22.24:183,0,22	0/1:33,0:32:63.15:279,0,63	1/1:30,0:27:33.21:253,33,0	1/1:14,1:15:33.33:207,33,0	0/1:17,0:16:7.34:147,0,7	0/1:26,3:29:36.40:201,0,36	0/1:32,0:32:99:139,0,625	0/1:28,0:27:55.56:266,0,56	1/1:22,0:22:23.22:304,23,0	1/1:19,0:19:11.04:301,11,0
chr10	8944296	.	T	TATCC	22528.50	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-1.762;DP=749;FS=11.224;HRun=0;HaplotypeScore=169.8624;InbreedingCoeff=0.8799;MQ=58.16;MQ0=12;MQRankSum=-2.629;QD=32.60;ReadPosRankSum=7.287;VQSLOD=3.4822;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:21,14:35:88.39:1460,88,0	1/1:8,0:8:17.09:260,17,0	0/0:26,0:24:31.74:0,32,735	0/0:32,0:26:58.94:0,59,756	1/1:16,2:18:39.10:635,39,0	1/1:23,8:29:80.05:1499,80,0	1/1:5,23:31:1.25:3,1,0	1/1:39,0:34:63.15:927,63,0	1/1:24,0:30:70.13:1097,70,0	1/1:24,0:23:52.78:899,53,0	1/1:21,0:21:33.04:555,33,0	1/1:25,0:29:69.13:1136,69,0	1/1:22,0:25:59.29:862,59,0	1/1:28,3:33:77.20:1311,77,0	1/1:27,2:31:66.09:1011,66,0	1/1:30,10:40:99:1998,99,0	1/1:19,0:20:6.37:572,6,0	1/1:24,1:25:52.34:740,52,0	1/1:18,1:15:32.47:530,32,0	1/1:26,1:33:67.17:1038,67,0	1/1:25,0:24:31.82:425,32,0	1/1:14,0:16:28.28:375,28,0	1/1:16,0:17:32.44:462,32,0	1/1:26,0:28:54.83:810,55,0	1/1:22,10:32:72.24:1441,72,0	1/1:24,3:27:56.06:972,56,0	1/1:19,0:22:44.04:708,44,0	1/1:20,0:23:51.08:802,51,0
chr10	8944359	.	TTCCATCCA	T	12994.29	PASS	AB=0.850;AC=47;AF=0.904;AN=52;BaseQRankSum=-6.795;DP=790;FS=14.326;HRun=0;HaplotypeScore=224.3698;InbreedingCoeff=0.2812;MQ=65.77;MQ0=10;MQRankSum=-2.967;QD=18.97;ReadPosRankSum=1.819;VQSLOD=3.0368;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:26,19:44:23.50:379,24,0	1/1:6,7:13:21.04:469,21,0	./.	./.	1/1:13,20:33:32.97:768,33,0	1/1:16,14:30:21:466,21,0	0/1:27,3:30:29.02:427,0,29	1/1:29,0:27:8.99:131,9,0	0/0:9,0:27:45.15:0,45,1463	1/1:15,14:29:42.05:814,42,0	1/1:8,11:19:14.20:317,14,0	1/1:16,13:29:21.07:523,21,0	1/1:5,25:30:42.04:910,42,0	1/1:15,18:33:36.09:843,36,0	1/1:14,21:35:48.02:1087,48,0	1/1:18,17:34:30.10:743,30,0	0/1:18,1:19:68.12:171,0,68	0/1:16,13:29:99:415,0,271	1/1:14,5:18:15.01:319,15,0	1/1:20,18:38:41.97:827,42,0	1/1:21,0:21:9.67:231,10,0	1/1:8,14:22:18.06:448,18,0	1/1:9,10:19:15.01:319,15,0	1/1:11,10:21:8.99:169,9,0	1/1:16,18:34:24.04:543,24,0	1/1:16,12:28:39.03:784,39,0	1/1:11,12:23:27.09:672,27,0	1/1:12,10:22:9.03:216,9,0
chr10	8947194	.	A	AG	27062.33	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-2.588;DP=763;FS=0.582;HRun=3;HaplotypeScore=85.2801;InbreedingCoeff=0.9999;MQ=87.31;MQ0=0;MQRankSum=-10.869;QD=38.01;ReadPosRankSum=6.638;VQSLOD=4.0791;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,46:48:99:1745,126,0	1/1:0,20:20:54.18:754,54,0	0/0:23,0:23:66.13:0,66,755	0/0:28,0:28:60.12:0,60,677	1/1:1,30:31:78.26:1089,78,0	1/1:0,28:28:81.27:1134,81,0	1/1:3,20:23:54.18:756,54,0	1/1:4,27:31:81.27:1135,81,0	1/1:1,29:30:81.27:1134,81,0	1/1:2,31:33:96.31:1323,96,0	1/1:1,14:15:42.14:586,42,0	1/1:2,28:30:78.26:1092,78,0	1/1:0,32:32:93.31:1297,93,0	1/1:0,26:27:78.26:1081,78,0	1/1:3,34:37:99:1386,99,0	1/1:0,33:33:96.32:1340,96,0	1/1:3,13:16:36.12:504,36,0	1/1:1,23:24:66.22:924,66,0	1/1:3,23:26:69.23:966,69,0	1/1:3,31:34:81.27:1134,81,0	1/1:0,32:32:96.32:1344,96,0	1/1:0,23:23:63.21:882,63,0	1/1:0,16:16:45.15:630,45,0	1/1:2,26:28:72.24:1008,72,0	1/1:2,22:24:66.22:924,66,0	1/1:0,29:29:87.29:1218,87,0	1/1:1,24:27:78.26:1086,78,0	1/1:1,14:15:42.14:588,42,0
chr10	8948053	.	ATATATGTATATGTATATG	A	1860.66	PASS	AC=14;AF=0.269;AN=52;BaseQRankSum=2.720;DP=626;FS=7.805;HRun=0;HaplotypeScore=296.8846;InbreedingCoeff=0.6980;MQ=62.32;MQ0=6;MQRankSum=-5.326;QD=12.83;ReadPosRankSum=-3.476;VQSLOD=0.8831;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:21,5:26:3.01:142,3,0	0/0:10,0:10:0.83:0,1,21	./.	./.	1/1:19,16:34:16.58:563,17,0	1/1:18,0:18:20.95:336,21,0	1/1:11,0:11:3.01:51,3,0	0/0:54,0:50:2.04:0,2,6	0/0:16,0:25:26.79:0,27,675	0/0:21,0:21:30.09:0,30,1474	0/0:20,0:19:11.24:0,11,591	0/0:19,0:20:14.16:0,14,696	0/0:19,0:24:21.06:0,21,506	0/0:26,0:26:15.02:0,15,727	0/0:25,0:25:24.08:0,24,859	1/1:11,10:21:6.02:271,6,0	0/0:21,0:21:33.10:0,33,1186	1/1:10,0:10:3.01:67,3,0	0/0:18,0:18:12.04:0,12,491	0/0:43,0:43:43.67:0,44,1423	0/0:20,0:20:18.03:0,18,377	0/0:18,0:20:8.23:0,8,248	0/0:11,0:11:2.20:0,2,118	0/0:11,0:10:0:0,0,0	1/1:17,7:24:15:591,15,0	0/0:23,0:30:36.12:0,36,1608	0/0:46,0:48:49.03:0,49,1898	0/0:14,0:13:6.02:0,6,283
chr10	8948110	.	T	TTC	397.55	PASS	AB=0.943;AC=6;AF=0.107;AN=56;BaseQRankSum=5.377;DP=630;FS=23.037;HRun=0;HaplotypeScore=178.5330;InbreedingCoeff=-0.1332;MQ=51.39;MQ0=8;MQRankSum=-5.158;QD=2.86;ReadPosRankSum=0.579;VQSLOD=1.1463;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:22,1:23:34.55:35,0,399	0/0:13,0:13:27.30:0,27,404	0/0:7,0:3:6.91:0,7,100	0/0:4,0:3:5.99:0,6,98	0/1:34,0:34:99:154,0,640	0/1:10,5:15:99:169,0,273	0/0:13,0:13:7.50:0,8,395	0/0:69,0:43:99:0,120,1956	0/0:20,0:20:47.73:0,48,590	0/0:32,0:32:87.30:0,87,1419	0/0:30,0:29:54.13:0,54,671	0/0:25,0:25:51.03:0,51,705	0/0:26,0:26:56.80:0,57,881	0/0:21,0:21:43.90:0,44,620	0/0:20,0:20:46.64:0,47,691	0/1:22,0:22:38.60:39,0,313	0/0:26,0:25:59.25:0,59,904	0/1:17,1:18:9.78:10,0,467	0/0:9,0:7:21.07:0,21,324	0/0:41,0:40:98.15:0,98,1418	0/0:6,0:6:15.05:0,15,219	0/0:11,0:11:13.54:0,14,210	0/0:19,0:19:33.71:0,34,503	0/0:9,0:8:12.04:0,12,196	0/1:27,0:27:99:114,0,637	0/0:35,0:34:99:0,99,1549	0/0:43,0:43:98.81:0,99,1500	0/0:12,0:12:18.24:0,18,149
chr10	8948181	.	ATGT	A	3782.28	PASS	AB=0.704;AC=16;AF=0.296;AN=54;BaseQRankSum=8.157;DP=396;FS=17.447;HRun=0;HaplotypeScore=96.2832;InbreedingCoeff=-0.4404;MQ=51.32;MQ0=17;MQRankSum=-3.729;QD=17.27;ReadPosRankSum=-1.289;VQSLOD=2.0276;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:72.24:0,72,1660	0/1:5,2:7:55.42:55,0,348	0/0:9,0:1:3.01:0,3,57	./.	0/0:28,0:28:82.52:0,83,1888	0/0:21,0:21:51.18:0,51,1215	0/0:8,0:8:24.08:0,24,586	0/0:12,0:9:27.09:0,27,644	0/0:4,0:4:12.04:0,12,262	0/1:11,10:21:99:481,0,710	0/1:11,11:22:99:314,0,698	0/1:5,10:15:99:351,0,330	0/1:6,5:11:99:191,0,372	0/1:5,4:9:99:152,0,269	0/1:10,4:14:99:101,0,642	0/0:11,0:11:30.10:0,30,727	0/1:2,5:7:99:197,0,130	0/0:18,0:17:42.14:0,42,973	0/0:3,0:3:9.03:0,9,212	0/1:7,8:15:99:349,0,437	0/1:4,0:4:42.93:43,0,183	0/1:5,5:10:99:183,0,319	0/1:8,8:16:99:216,0,477	0/1:6,5:11:99:147,0,264	0/0:32,0:32:93.32:0,93,2137	0/1:20,4:24:99:379,0,947	0/1:8,10:18:99:463,0,424	0/1:6,9:15:99:162,0,375
chr10	8950110	.	CTGTGTGTGTG	C	428.38	PASS	AB=0.865;AC=13;AF=0.361;AN=36;BaseQRankSum=1.776;DP=469;FS=0.000;HRun=0;HaplotypeScore=95.7786;InbreedingCoeff=0.3457;MQ=28.98;MQ0=43;MQRankSum=-3.719;QD=3.37;ReadPosRankSum=1.697;VQSLOD=1.5463;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:19:14.22:0,14,564	1/1:8,0:7:0.47:1,0,0	./.	./.	0/0:14,0:13:9.03:0,9,324	0/0:28,0:25:14.64:0,15,420	0/0:24,0:12:8.49:0,8,257	0/0:33,0:27:2.71:0,3,110	./.	0/1:18,1:17:0.99:15,0,1	./.	./.	1/1:14,1:9:2.96:19,3,0	1/1:13,1:12:0.47:1,0,0	./.	0/0:25,0:18:20.94:0,21,805	0/0:19,0:11:6.02:0,6,116	0/0:16,0:12:18.06:0,18,643	1/1:5,0:6:5.39:166,5,0	./.	./.	./.	./.	1/1:11,1:6:3.01:52,3,0	0/0:15,0:11:12.04:0,12,518	0/1:20,1:18:62.11:137,0,62	0/0:17,0:13:8.05:0,8,87	0/1:9,0:8:67.61:152,0,68
chr10	8950210	.	A	ATGTGTG	4829.47	PASS	AB=0.806;AC=37;AF=0.712;AN=52;BaseQRankSum=-7.722;DP=668;FS=2.678;HRun=0;HaplotypeScore=154.2450;InbreedingCoeff=-0.0219;MQ=41.80;MQ0=71;MQRankSum=0.098;QD=8.40;ReadPosRankSum=0.534;VQSLOD=4.0706;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:17,2:16:8.96:208,9,0	1/1:7,3:9:8.84:230,9,0	0/0:37,0:6:2.82:0,3,16	0/1:33,0:3:0:0,0,0	1/1:7,0:7:3.01:39,3,0	1/1:18,0:19:20.62:254,21,0	0/0:21,0:12:1.25:0,1,3	1/1:26,0:18:2.97:20,3,0	0/1:17,0:11:0.06:0,0,0	0/1:18,0:37:99:462,0,147	1/1:19,0:24:14.20:193,14,0	1/1:10,14:26:11.94:333,12,0	1/1:6,17:24:21.07:513,21,0	0/1:16,4:26:1.06:307,0,1	0/1:15,0:24:99:127,0,121	1/1:8,8:16:9.03:115,9,0	0/1:13,0:18:60.17:60,0,263	1/1:12,0:6:7.27:100,7,0	1/1:12,2:12:18.06:354,18,0	./.	1/1:13,2:9:3.01:59,3,0	0/1:12,9:19:0.16:0,0,0	0/1:7,0:12:65.04:65,0,113	0/1:33,0:45:99:273,0,424	./.	0/1:8,12:27:99:655,0,119	1/1:5,14:22:15.05:421,15,0	0/1:8,0:8:41.53:42,0,72
chr10	8950365	.	C	CGTGTGT	762	PASS	AB=0.610;AC=13;AF=0.232;AN=56;BaseQRankSum=4.389;DP=723;FS=4.632;HRun=0;HaplotypeScore=228.2712;InbreedingCoeff=0.8067;MQ=46.41;MQ0=34;MQRankSum=-3.984;QD=6.20;ReadPosRankSum=-2.043;VQSLOD=2.3359;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,2:14:2.55:0,3,15	0/0:8,0:8:21.07:0,21,368	0/0:40,0:17:25.34:0,25,325	0/0:49,0:21:14.03:0,14,380	1/1:10,6:16:4.78:69,5,0	1/1:12,3:12:5.08:126,5,0	1/1:14,2:12:11.94:162,12,0	0/0:32,0:32:60.20:0,60,1142	0/1:9,0:21:2.52:13,0,3	0/0:33,0:33:66.21:0,66,1250	0/0:22,0:21:45.14:0,45,890	0/0:28,0:27:49.05:0,49,968	0/0:31,0:31:56.13:0,56,998	0/0:32,0:29:36.12:0,36,727	0/0:39,0:37:33.98:0,34,634	1/1:15,4:16:7.50:76,7,0	0/0:34,0:32:7.77:0,8,1044	1/1:9,2:7:11.98:126,12,0	0/0:17,0:12:27.02:0,27,433	0/0:16,0:16:33.11:0,33,643	0/0:30,0:30:54.15:0,54,997	0/0:23,0:23:42.13:0,42,813	0/0:18,0:17:36.11:0,36,684	0/0:36,0:33:47.76:0,48,916	1/1:11,4:15:18.05:360,18,0	0/0:35,0:35:56.33:0,56,1367	0/0:21,0:17:33.03:0,33,584	0/0:13,0:13:23.21:0,23,515
chr10	8950428	.	GTCTCTCTGTC	G	3082.63	PASS	AB=0.830;AC=16;AF=0.286;AN=56;BaseQRankSum=7.893;DP=657;FS=49.820;HRun=0;HaplotypeScore=206.4204;InbreedingCoeff=0.8072;MQ=46.09;MQ0=45;MQRankSum=-6.377;QD=19.27;ReadPosRankSum=-4.574;VQSLOD=0.1939;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:12,10:14:17.58:404,0,18	0/0:12,0:12:33:0,33,1149	0/0:28,0:4:9.03:0,9,140	0/1:34,0:11:0.55:1,0,53	1/1:6,3:8:5.92:139,6,0	1/1:7,10:10:24.08:567,24,0	1/1:14,5:13:15.05:332,15,0	0/0:57,0:42:99:0,105,2745	1/1:10,8:12:21.07:441,21,0	0/0:22,0:22:57.19:0,57,2323	0/0:13,0:13:15.05:0,15,547	0/0:33,0:32:78.26:0,78,3192	0/0:34,0:30:78.25:0,78,3191	0/0:32,0:29:63.21:0,63,2765	0/0:37,0:34:66.23:0,66,2970	1/1:10,10:14:24.08:644,24,0	0/0:29,0:28:32.88:0,33,1813	1/1:7,1:3:5.95:138,6,0	0/0:21,0:13:29.88:0,30,984	0/0:9,0:9:21.07:0,21,641	0/0:29,0:29:63.17:0,63,2593	0/0:16,0:16:30.10:0,30,1335	0/0:17,0:16:45.15:0,45,1713	0/0:52,0:47:78.21:0,78,3497	1/1:5,7:12:27.08:606,27,0	0/0:30,0:29:63.15:0,63,2614	0/0:12,0:10:18.06:0,18,783	0/0:13,0:13:24.08:0,24,940
chr10	8950436	.	G	GTC	520.40	PASS	AB=0.969;AC=9;AF=0.161;AN=56;BaseQRankSum=6.083;DP=661;FS=6.451;HRun=0;HaplotypeScore=161.9365;InbreedingCoeff=0.0196;MQ=46.85;MQ0=32;MQRankSum=-1.975;QD=3.31;ReadPosRankSum=-3.458;VQSLOD=1.0192;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:21,1:15:15.25:124,0,15	0/0:12,0:12:33:0,33,404	0/0:27,0:5:0.90:0,1,117	0/1:36,0:11:7.95:8,0,30	1/1:7,0:6:6.02:64,6,0	0/1:19,0:14:52.92:53,0,95	0/1:17,0:11:16.17:83,0,16	0/0:56,0:49:99:0,123,1495	0/1:18,1:14:71.92:128,0,72	0/0:20,0:20:57.18:0,57,737	0/0:11,0:11:15.05:0,15,194	0/0:32,0:31:78.25:0,78,1007	0/0:35,0:32:81.13:0,81,1025	0/0:32,0:29:63.20:0,63,813	0/0:40,0:37:69.22:0,69,896	0/1:19,2:15:64.40:64,0,78	0/0:31,0:30:48.10:0,48,614	0/0:8,0:5:8.64:0,9,51	0/0:17,0:11:32.88:0,33,378	0/0:13,0:13:27.05:0,27,320	0/0:30,0:30:66.06:0,66,834	0/0:18,0:17:33.09:0,33,414	0/0:18,0:17:48.14:0,48,607	0/0:51,0:46:81.26:0,81,1052	0/1:12,0:12:49.49:134,0,49	0/0:28,0:27:67.96:0,68,831	0/0:13,0:11:21.07:0,21,272	0/0:10,0:10:24.08:0,24,311
chr10	8950444	.	CTG	C	408.33	PASS	AB=0.958;AC=13;AF=0.232;AN=56;BaseQRankSum=8.382;DP=683;FS=8.922;HRun=0;HaplotypeScore=161.4508;InbreedingCoeff=0.3536;MQ=48.56;MQ0=33;MQRankSum=-4.207;QD=2.23;ReadPosRankSum=-2.424;VQSLOD=1.1035;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:22,2:16:9.40:91,9,0	0/0:13,0:13:31.62:0,32,520	0/0:28,0:8:8.08:0,8,280	0/1:41,0:12:12.68:13,0,78	1/1:6,0:5:5.97:63,6,0	1/1:19,1:13:3.45:25,3,0	0/1:17,3:15:59.39:59,0,94	0/0:49,0:46:99:0,135,2017	0/1:23,0:17:75.52:76,0,76	0/0:26,0:24:71.98:0,72,1127	0/0:10,0:10:15.03:0,15,250	0/0:33,0:32:83.97:0,84,1355	0/0:36,0:33:84.16:0,84,1471	0/0:29,0:26:63.13:0,63,1137	0/0:43,0:40:81.23:0,81,1401	0/1:19,2:15:12.10:80,0,12	0/0:33,1:30:39.35:0,39,860	0/1:11,0:7:15.72:23,0,16	0/0:21,0:12:27.96:0,28,478	0/0:12,0:12:30.09:0,30,512	0/0:31,0:31:71.97:0,72,1236	0/0:16,0:15:33.10:0,33,601	0/0:20,0:18:51.13:0,51,872	0/0:49,0:43:81.19:0,81,1490	1/1:15,1:14:0.32:132,0,0	0/0:26,0:25:72.16:0,72,1274	0/0:14,0:11:24.08:0,24,449	0/0:10,0:10:26.10:0,26,418
chr10	8950485	.	G	GGT	2849.48	PASS	AB=0.908;AC=40;AF=0.741;AN=54;BaseQRankSum=1.390;DP=675;FS=2.241;HRun=0;HaplotypeScore=189.6115;InbreedingCoeff=0.3302;MQ=46.41;MQ0=13;MQRankSum=-0.785;QD=5.20;ReadPosRankSum=-1.112;VQSLOD=3.0131;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:19,2:12:10.07:17,0,10	1/1:6,1:7:8.45:92,8,0	0/0:30,0:16:11.59:0,12,102	0/0:34,0:15:14.99:0,15,146	1/1:9,4:11:3.01:41,3,0	1/1:21,2:15:15.44:143,15,0	0/1:25,3:23:10.81:79,0,11	1/1:40,0:33:11.69:212,12,0	0/0:31,0:27:52.58:0,53,757	0/1:29,0:21:30.64:91,0,31	./.	1/1:30,3:31:21.83:192,22,0	1/1:18,7:27:15.51:173,16,0	1/1:26,6:31:7.95:196,8,0	1/1:38,1:36:28.63:269,29,0	0/1:18,6:19:16.13:183,0,16	1/1:24,2:22:11.48:114,11,0	1/1:14,0:12:5.46:139,5,0	1/1:28,0:25:10.26:76,10,0	1/1:10,2:12:11.97:115,12,0	1/1:28,2:29:8.66:124,9,0	1/1:19,1:17:4.81:75,5,0	0/0:21,0:19:5.89:0,6,34	0/1:34,1:32:3.51:71,0,4	0/1:15,3:16:0.35:11,0,0	1/1:22,2:24:26.49:360,26,0	1/1:14,2:11:18.03:216,18,0	1/1:4,0:3:2.98:22,3,0
chr10	8950530	.	GTC	G	442.48	PASS	AB=0.883;AC=12;AF=0.214;AN=56;BaseQRankSum=6.883;DP=611;FS=11.561;HRun=0;HaplotypeScore=196.5650;InbreedingCoeff=-0.2802;MQ=43.79;MQ0=10;MQRankSum=-2.610;QD=1.84;ReadPosRankSum=-2.410;VQSLOD=1.3310;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,2:18:24.04:0,24,425	0/1:5,0:5:30.28:30,0,134	0/0:22,0:7:12.04:0,12,197	0/0:35,2:14:35.68:0,36,482	0/0:13,3:14:21.07:0,21,325	0/0:12,4:11:21.07:0,21,351	0/0:29,4:29:35.30:0,35,595	0/0:43,0:34:79.34:0,79,1259	0/0:35,0:35:87.65:0,88,1454	0/0:22,1:17:27.55:0,28,624	0/0:9,2:10:9.03:0,9,154	0/0:22,3:24:8.21:0,8,411	0/1:27,5:31:10.23:10,0,760	0/1:18,4:22:99:102,0,231	0/1:35,2:36:10.72:11,0,365	0/1:13,6:18:99:100,0,238	0/1:19,1:20:42.36:42,0,282	0/1:15,1:16:84.56:85,0,440	0/1:16,2:14:80.81:81,0,264	0/0:13,0:13:11.53:0,12,231	0/0:18,0:17:14.07:0,14,283	0/0:16,2:16:16.80:0,17,302	0/1:12,2:12:11.89:12,0,104	0/0:30,2:33:20.86:0,21,347	0/1:10,6:14:48.06:48,0,108	0/1:20,3:20:36.86:37,0,763	0/1:15,2:12:34.20:34,0,269	0/0:5,0:5:15.05:0,15,230
chr10	8950532	.	C	CTG	943.36	PASS	AB=0.904;AC=15;AF=0.268;AN=56;BaseQRankSum=6.161;DP=614;FS=4.291;HRun=0;HaplotypeScore=196.0315;InbreedingCoeff=-0.3742;MQ=43.68;MQ0=10;MQRankSum=-4.624;QD=2.83;ReadPosRankSum=-3.216;VQSLOD=1.7445;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:19:16.04:0,16,237	0/1:4,1:5:33.41:33,0,125	0/0:21,0:7:12.04:0,12,175	0/0:38,0:14:35.98:0,36,467	0/0:18,1:16:21.07:0,21,300	0/0:15,0:11:18.50:0,19,182	0/0:32,1:29:21.87:0,22,430	0/1:41,1:34:16.08:16,0,853	0/0:34,0:34:87.65:0,88,1243	0/1:21,2:17:49.24:49,0,424	0/0:8,3:10:9.02:0,9,104	0/1:22,3:24:25.59:26,0,303	0/1:28,4:31:46.36:46,0,653	0/1:15,7:22:94.16:173,0,94	0/1:29,7:35:46.94:47,0,281	0/1:19,0:18:99:115,0,199	0/1:19,2:20:53.49:53,0,189	0/1:15,0:15:95.73:96,0,297	0/1:17,2:14:99:187,0,217	0/0:13,1:14:14.93:0,15,212	0/0:15,1:15:14.26:0,14,208	0/0:18,0:15:20.58:0,21,245	0/1:10,3:11:11.89:12,0,104	0/0:28,4:32:20.65:0,21,273	0/1:18,0:16:48.57:49,0,104	0/1:23,2:22:99:154,0,471	0/1:16,2:13:42.91:43,0,184	0/0:5,0:5:15.05:0,15,203
chr10	8950572	.	G	GTCTC	19848.45	PASS	AB=0.894;AC=52;AF=0.929;AN=56;BaseQRankSum=-4.694;DP=669;FS=11.894;HRun=0;HaplotypeScore=140.2611;InbreedingCoeff=0.5459;MQ=54.27;MQ0=17;MQRankSum=3.268;QD=32.17;ReadPosRankSum=5.360;VQSLOD=3.7571;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,12:26:38.71:799,39,0	1/1:2,5:6:9.03:204,9,0	0/0:52,0:20:42.31:0,42,503	0/1:55,0:18:0.94:1,0,290	1/1:9,17:24:55.66:1373,56,0	1/1:10,7:15:24.08:544,24,0	1/1:20,12:32:56.92:1121,57,0	1/1:13,10:23:30.08:500,30,0	1/1:13,11:25:44.92:954,45,0	1/1:10,19:28:65.57:1236,66,0	1/1:9,7:14:21.07:496,21,0	1/1:15,10:26:47.91:919,48,0	1/1:11,17:29:62.99:1374,63,0	1/1:12,8:20:24.08:574,24,0	1/1:12,15:27:43.76:954,44,0	1/1:9,6:16:29.72:540,30,0	1/1:14,9:22:41.68:862,42,0	1/1:10,9:19:39.75:881,40,0	1/1:7,12:20:42.11:870,42,0	1/1:6,9:14:33.11:740,33,0	1/1:14,8:21:26.72:515,27,0	1/1:3,15:17:23.56:533,24,0	1/1:6,6:12:24.08:561,24,0	0/1:27,9:37:17.80:623,0,18	1/1:7,11:19:32.85:735,33,0	1/1:20,11:29:2.98:1120,3,0	1/1:6,3:9:18.06:412,18,0	1/1:4,4:7:18.06:406,18,0
chr10	8950660	.	T	TG	10363.89	PASS	AB=1.000;AC=51;AF=0.911;AN=56;BaseQRankSum=-5.112;DP=562;FS=8.006;HRun=8;HaplotypeScore=87.4996;InbreedingCoeff=0.7833;MQ=76.84;MQ0=1;MQRankSum=-4.931;QD=20.16;ReadPosRankSum=1.665;VQSLOD=4.4892;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,18:26:45.56:501,46,0	1/1:1,4:5:12.01:124,12,0	0/0:24,0:21:17.29:0,17,163	0/1:32,0:29:1.82:2,0,168	1/1:9,10:18:20.59:226,21,0	1/1:4,12:16:30.04:321,30,0	1/1:5,31:36:78.02:879,78,0	1/1:6,3:9:3.01:35,3,0	0/0:24,0:24:60.02:0,60,548	1/1:7,8:15:24.07:277,24,0	1/1:3,12:15:24.07:273,24,0	1/1:6,23:30:57:632,57,0	1/1:4,18:22:45.13:519,45,0	1/1:1,27:28:66.20:762,66,0	1/1:2,18:20:42.12:485,42,0	1/1:2,16:18:17.67:457,18,0	1/1:2,20:22:51.15:589,51,0	1/1:3,14:17:47.97:525,48,0	1/1:3,8:11:27.08:307,27,0	1/1:4,14:18:29.71:285,30,0	1/1:15,13:28:53.81:601,54,0	1/1:1,8:10:12.04:138,12,0	1/1:4,12:16:27.08:311,27,0	1/1:2,26:28:65:731,65,0	1/1:8,18:26:39.12:450,39,0	1/1:10,16:26:33.10:380,33,0	1/1:1,11:12:33.10:381,33,0	1/1:1,7:8:15.04:173,15,0
chr10	8951181	.	G	GTT	20996.16	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-6.943;DP=622;FS=20.975;HRun=7;HaplotypeScore=59.2859;InbreedingCoeff=0.9675;MQ=72.13;MQ0=5;MQRankSum=-7.889;QD=35.77;ReadPosRankSum=4.848;VQSLOD=3.3642;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,26:29:66.11:1023,66,0	1/1:0,6:7:17.54:240,18,0	0/0:19,0:18:35.74:0,36,366	0/0:16,0:15:26.68:0,27,293	1/1:6,38:44:99:1735,114,0	1/1:3,26:30:63.22:1034,63,0	1/1:5,13:19:41.63:632,42,0	1/1:8,37:45:99:1716,108,0	1/1:2,12:15:21.07:345,21,0	1/1:0,25:26:72.22:1131,72,0	1/1:4,20:23:54.01:752,54,0	1/1:1,20:21:42.14:684,42,0	1/1:2,23:25:57.19:935,57,0	1/1:1,17:18:36.12:591,36,0	1/1:3,28:31:69.24:1132,69,0	1/1:2,14:16:36.12:591,36,0	1/1:2,19:20:48.16:788,48,0	1/1:2,19:20:48.16:788,48,0	1/1:4,21:25:60.19:936,60,0	1/1:6,23:29:69.19:1102,69,0	1/1:3,10:13:24.08:394,24,0	1/1:2,9:11:27.05:414,27,0	1/1:2,18:21:42.14:669,42,0	1/1:0,5:6:12.04:197,12,0	1/1:2,26:27:60.20:985,60,0	1/1:1,32:33:93.28:1446,93,0	1/1:3,19:22:30.10:492,30,0	1/1:0,6:6:15.05:246,15,0
chr10	8954177	.	CAGATAGAGAGATAGAT	C	6090.74	PASS	AB=0.683;AC=31;AF=0.574;AN=54;BaseQRankSum=-6.819;DP=712;FS=11.709;HRun=0;HaplotypeScore=277.2594;InbreedingCoeff=0.6458;MQ=65.98;MQ0=11;MQRankSum=0.259;QD=14.47;ReadPosRankSum=3.125;VQSLOD=1.7493;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:31:0.07:0,0,371	0/0:1,0:14:1.17:0,1,3	0/0:45,0:21:34.01:0,34,352	0/0:34,0:13:23.56:0,24,176	0/0:21,0:20:15.04:0,15,549	0/0:25,0:25:34.29:0,34,1041	0/0:22,0:19:2.96:0,3,23	1/1:36,0:36:83.56:655,84,0	0/0:20,0:20:12:0,12,319	1/1:3,37:39:99:1440,105,0	1/1:20,1:20:41.97:467,42,0	./.	0/1:1,0:21:0:0,0,0	1/1:1,17:18:6.02:265,6,0	1/1:1,26:27:2.69:71,3,0	0/1:26,0:26:52.57:53,0,180	1/1:20,1:21:44.79:501,45,0	0/0:28,0:28:28.89:0,29,1008	1/1:11,4:13:29.96:359,30,0	1/1:2,24:26:6.84:58,7,0	1/1:18,0:18:29.96:248,30,0	1/1:3,0:20:0.47:1,0,0	1/1:2,31:33:0.47:1,0,0	0/1:3,0:22:0:0,0,0	0/0:24,0:24:18.98:0,19,568	1/1:5,29:33:77.24:1232,77,0	1/1:5,29:34:15.05:627,15,0	1/1:0,8:8:3.01:114,3,0
chr10	8954399	.	GT	G	6962.74	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-8.000;DP=647;FS=3.290;HRun=1;HaplotypeScore=93.9605;InbreedingCoeff=0.9988;MQ=87.70;MQ0=1;MQRankSum=-4.589;QD=38.47;ReadPosRankSum=4.592;VQSLOD=5.2623;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,40:40:99:1552,111,0	0/0:7,0:7:21.05:0,21,305	0/0:20,0:20:57.99:0,58,863	0/0:28,0:28:30.61:0,31,971	1/1:0,17:17:41.99:587,42,0	1/1:0,22:22:63.21:881,63,0	1/1:0,20:20:57.19:797,57,0	0/0:29,0:29:84.28:0,84,1309	1/1:0,11:11:30.10:419,30,0	0/0:20,0:20:60.20:0,60,960	0/0:16,0:16:42.14:0,42,661	0/0:27,0:27:81.28:0,81,1279	0/0:23,0:23:66.70:0,67,1053	0/0:21,0:21:63.21:0,63,1006	0/0:23,0:23:69.22:0,69,1073	1/1:0,18:18:51.17:713,51,0	0/0:43,0:43:99:0,129,2037	1/1:0,28:27:69.23:964,69,0	0/0:19,0:19:51.16:0,51,792	0/0:17,0:17:51.17:0,51,815	0/0:43,0:43:99:0,126,1993	0/0:15,0:15:45.15:0,45,717	0/0:15,0:15:42.14:0,42,664	0/0:46,0:46:99:0,138,2206	1/1:0,25:25:75.25:1049,75,0	0/0:22,0:22:66.22:0,66,1041	0/0:24,0:24:66.22:0,66,1047	0/0:8,0:8:24.08:0,24,380
chr10	8956339	.	A	ACTCACTCT	6280.07	PASS	AB=0.931;AC=34;AF=0.607;AN=56;BaseQRankSum=-10.225;DP=741;FS=13.558;HRun=0;HaplotypeScore=211.2569;InbreedingCoeff=0.2049;MQ=69.71;MQ0=8;MQRankSum=-2.523;QD=11.59;ReadPosRankSum=-4.052;VQSLOD=1.2948;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:35:21.69:0,22,374	1/1:12,0:12:23.53:176,24,0	0/0:38,0:23:45.39:0,45,571	0/0:55,0:33:67.61:0,68,621	0/1:22,0:22:58.23:58,0,268	0/1:31,0:32:65.58:66,0,577	0/1:21,0:25:29.07:29,0,372	1/1:40,0:40:92.37:851,92,0	0/0:13,0:23:3.09:0,3,256	0/1:25,0:25:99:361,0,122	0/1:23,0:23:99:285,0,162	1/1:21,0:21:44.14:511,44,0	1/1:4,12:23:6.87:288,7,0	0/1:4,1:30:1.55:69,0,2	0/1:19,0:21:99:166,0,269	0/0:25,0:27:38.58:0,39,862	1/1:17,0:17:35.76:426,36,0	0/0:21,0:20:47.98:0,48,614	1/1:17,0:17:39.45:335,39,0	1/1:4,0:28:6.75:66,7,0	1/1:25,0:24:26.57:252,27,0	1/1:39,0:38:65.22:601,65,0	0/1:17,0:18:99:128,0,247	0/1:16,0:16:99:150,0,278	0/1:29,0:31:45.89:46,0,299	1/1:38,0:38:99:1055,103,0	1/1:4,17:27:3.01:128,3,0	1/1:10,0:10:28.16:235,28,0
chr10	8957098	.	CG	C	3908.51	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-12.888;DP=541;FS=26.043;HRun=8;HaplotypeScore=87.7623;InbreedingCoeff=0.9850;MQ=93.19;MQ0=0;MQRankSum=-5.654;QD=24.74;ReadPosRankSum=5.006;VQSLOD=2.2127;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,30:35:90.14:869,90,0	0/0:2,0:8:11.50:0,12,58	0/0:31,0:31:37.19:0,37,652	0/0:21,0:21:51.94:0,52,572	1/1:2,18:20:51.08:492,51,0	1/1:2,23:25:66.10:636,66,0	1/1:3,14:17:36.06:348,36,0	0/0:11,0:21:36.67:0,37,222	1/1:2,6:8:18.02:174,18,0	0/0:6,0:21:48.70:0,49,281	0/0:4,0:16:25.88:0,26,132	0/0:5,0:24:34.56:0,35,187	0/0:9,0:22:25.58:0,26,136	0/0:5,0:17:22.87:0,23,115	0/0:6,0:28:48.93:0,49,260	1/1:0,11:11:30.05:290,30,0	0/0:2,0:20:46:0,46,234	1/1:1,17:18:48.08:463,48,0	0/0:7,0:16:33.64:0,34,204	0/0:3,0:18:35.36:0,35,202	0/0:4,0:14:23:0,23,117	0/0:4,0:13:11.58:0,12,63	0/0:4,0:15:23:0,23,117	0/0:4,0:17:37.62:0,38,206	1/1:0,24:24:66.11:637,66,0	0/0:12,0:25:40.74:0,41,254	0/0:7,0:21:28.81:0,29,157	0/0:3,0:15:31.75:0,32,171
chr10	8960719	.	C	CT	11600.15	PASS	AB=0.741;AC=36;AF=0.643;AN=56;BaseQRankSum=-14.271;DP=680;FS=3.361;HRun=9;HaplotypeScore=63.1481;InbreedingCoeff=0.8814;MQ=69.17;MQ0=0;MQRankSum=0.161;QD=24.17;ReadPosRankSum=-0.644;VQSLOD=5.5100;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:38.99:0,39,349	1/1:1,13:14:32.60:351,33,0	0/0:15,0:14:26.45:0,26,209	0/0:4,0:4:6.99:0,7,41	0/0:32,0:33:85.99:0,86,730	0/0:27,0:28:70.99:0,71,600	0/0:24,0:24:62.97:0,63,547	1/1:5,27:33:86.89:883,87,0	0/0:1,0:23:40.74:0,41,120	1/1:11,21:32:63.05:636,63,0	1/1:4,16:20:42.11:457,42,0	1/1:5,25:31:26.27:726,26,0	1/1:5,26:31:26.11:740,26,0	1/1:3,20:23:48.13:531,48,0	1/1:1,26:28:78.04:844,78,0	0/0:15,0:18:41.03:0,41,344	1/1:2,17:18:45.12:498,45,0	0/1:10,1:11:6.19:6,0,181	1/1:5,23:29:69:734,69,0	1/1:1,30:31:87.16:936,87,0	1/1:2,25:27:51.14:564,51,0	0/1:6,20:26:0.48:447,0,0	1/1:2,21:24:56.99:612,57,0	1/1:4,26:30:66.18:730,66,0	0/0:31,0:31:80.95:0,81,697	1/1:4,28:32:75.17:810,75,0	1/1:2,26:28:69.19:763,69,0	1/1:1,10:11:30.08:332,30,0
chr10	8961395	.	G	GCACACA	2213.83	PASS	AB=0.996;AC=20;AF=0.357;AN=56;BaseQRankSum=-8.186;DP=906;FS=8.405;HRun=0;HaplotypeScore=336.4997;InbreedingCoeff=-0.1045;MQ=56.95;MQ0=15;MQRankSum=7.887;QD=4.32;ReadPosRankSum=-0.292;VQSLOD=0.9622;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:42,1:43:2.83:0,3,38	0/1:13,0:13:2.21:2,0,17	0/0:68,0:21:42.14:0,42,874	0/0:86,0:28:40.31:0,40,705	0/0:16,0:16:5.95:0,6,76	0/0:31,0:31:28.26:0,28,322	0/1:29,0:29:99:107,0,166	0/1:36,0:36:20.43:348,0,20	1/1:12,6:21:26.73:624,27,0	0/1:30,0:30:41.71:42,0,225	0/0:22,0:22:16.66:0,17,77	0/1:29,0:30:33.58:147,0,34	0/1:26,0:26:41.54:42,0,42	0/1:35,0:35:33.51:93,0,34	0/0:41,0:41:56.05:0,56,276	0/0:27,0:27:15.46:0,15,428	0/1:31,0:30:21.84:79,0,22	0/1:25,0:25:23.18:23,0,203	0/1:21,0:20:4.39:178,0,4	0/1:20,0:20:14.85:72,0,15	0/1:69,0:69:0.64:130,0,1	0/1:24,0:24:2.53:68,0,3	0/0:17,0:17:22.17:0,22,102	0/0:42,0:42:46.78:0,47,275	0/1:39,0:39:10.63:11,0,416	1/1:25,0:25:28.43:206,28,0	0/1:30,0:30:54.76:149,0,55	0/1:7,0:7:2.91:59,0,3
chr10	8961406	.	CACACATGT	C	3561.64	PASS	AB=1.000;AC=28;AF=0.500;AN=56;BaseQRankSum=-10.767;DP=940;FS=10.215;HRun=0;HaplotypeScore=342.9335;InbreedingCoeff=-0.0214;MQ=48.68;MQ0=25;MQRankSum=-4.081;QD=5.69;ReadPosRankSum=-7.566;VQSLOD=-0.6926;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:47,0:47:6.47:80,6,0	0/0:14,0:14:26.65:0,27,388	0/0:74,0:18:51.16:0,51,1393	0/0:98,0:23:49.35:0,49,1322	1/1:15,1:16:6.44:48,6,0	1/1:28,3:31:29.98:332,30,0	1/1:27,1:28:21.91:226,22,0	0/1:38,0:36:99:406,0,580	0/1:21,0:21:78.85:79,0,158	0/1:34,0:33:99:255,0,435	0/0:21,0:21:17.69:0,18,174	0/1:32,0:32:99:179,0,674	0/1:26,0:26:37.59:38,0,515	0/1:33,0:33:14.07:14,0,903	0/0:41,0:41:60.14:0,60,546	1/1:24,0:24:38.91:308,39,0	0/1:31,0:30:99:121,0,678	1/1:27,0:27:23.94:189,24,0	0/1:22,0:19:99:192,0,254	0/1:21,0:21:32.91:33,0,452	0/1:74,0:74:99:160,0,1441	0/1:24,0:24:11.21:11,0,571	0/0:20,0:20:23.39:0,23,231	0/0:46,0:46:53.35:0,53,494	1/1:32,3:35:39.40:354,39,0	0/1:25,0:25:99:274,0,601	0/1:29,0:29:99:222,0,732	0/1:8,0:8:40.19:40,0,218
chr10	8961408	.	CACATGT	C	7304.94	PASS	AB=0.997;AC=31;AF=0.554;AN=56;BaseQRankSum=-14.069;DP=940;FS=0.751;HRun=0;HaplotypeScore=308.5333;InbreedingCoeff=-0.0758;MQ=48.61;MQ0=26;MQRankSum=-5.701;QD=10.32;ReadPosRankSum=-9.719;VQSLOD=1.2393;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:9,38:47:5.58:125,6,0	0/0:13,0:13:21.02:0,21,183	0/0:78,0:19:54.17:0,54,1411	0/0:100,0:24:47.25:0,47,1217	1/1:1,14:15:6.01:142,6,0	1/1:7,24:31:30.08:669,30,0	1/1:3,27:30:20.85:473,21,0	0/1:37,0:35:99:686,0,225	0/1:22,0:22:71.05:195,0,71	1/1:34,0:33:14.88:471,15,0	0/0:21,0:21:6.22:0,6,16	0/1:32,0:32:99:252,0,304	0/1:26,0:26:99:102,0,213	0/1:33,0:33:99:210,0,364	0/1:36,1:37:1.30:1,0,21	1/1:1,23:24:39.13:921,39,0	0/1:30,0:29:99:170,0,308	1/1:5,23:28:24.08:567,24,0	0/1:22,0:19:92.15:324,0,92	0/1:20,0:20:39.90:40,0,180	0/1:74,0:74:99:243,0,595	0/1:23,0:23:99:122,0,218	0/0:20,0:20:8.31:0,8,20	0/1:45,0:46:2.12:2,0,22	1/1:5,30:35:39.13:921,39,0	0/1:25,0:25:99:338,0,212	0/1:29,0:29:99:287,0,383	0/1:8,0:8:42.01:42,0,88
chr10	8961410	.	CATGT	C	9940.25	PASS	AB=0.904;AC=48;AF=0.857;AN=56;BaseQRankSum=0.143;DP=932;FS=0.000;HRun=0;HaplotypeScore=280.7418;InbreedingCoeff=0.3865;MQ=48.46;MQ0=26;MQRankSum=5.552;QD=13.27;ReadPosRankSum=2.746;VQSLOD=4.0475;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:45,0:45:5.54:91,6,0	0/1:12,1:13:6.18:61,0,6	0/0:80,0:21:60.19:0,60,1374	0/0:101,0:25:27.54:0,28,994	1/1:15,0:15:6.02:72,6,0	1/1:30,1:31:30.08:375,30,0	1/1:29,0:29:20.61:249,21,0	0/1:26,8:33:5.30:929,0,5	1/1:18,3:21:21.88:272,22,0	1/1:28,6:33:72.10:1161,72,0	1/1:17,3:20:17.84:142,18,0	0/1:30,2:32:17.77:388,0,18	1/1:21,5:26:9.35:304,9,0	1/1:31,2:33:34.95:442,35,0	1/1:32,5:37:59.49:549,59,0	1/1:23,0:23:39.12:470,39,0	1/1:19,10:28:10.98:285,11,0	1/1:26,1:27:24.07:291,24,0	1/1:17,5:19:21.16:486,21,0	1/1:17,3:20:22.29:203,22,0	1/1:70,5:75:53.42:731,53,0	1/1:21,2:23:25.85:316,26,0	1/1:16,3:19:24.40:191,24,0	1/1:38,7:45:54.08:495,54,0	1/1:35,0:35:39.12:467,39,0	1/1:20,4:24:40.39:526,40,0	0/1:27,2:29:24.15:359,0,24	1/1:7,1:8:7.53:86,8,0
chr10	8961411	.	ATG	A	8995.42	PASS	AB=0.917;AC=51;AF=0.911;AN=56;BaseQRankSum=2.713;DP=922;FS=3.291;HRun=0;HaplotypeScore=262.7965;InbreedingCoeff=0.6980;MQ=48.37;MQ0=27;MQRankSum=6.504;QD=12.27;ReadPosRankSum=4.546;VQSLOD=4.3197;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:40,1:41:5.55:49,6,0	1/1:11,2:13:7.65:102,8,0	0/0:83,0:21:62.18:0,62,903	0/0:102,0:25:36.89:0,37,681	1/1:15,0:15:5.68:29,6,0	1/1:29,0:29:28.58:164,29,0	1/1:28,0:28:19.89:100,20,0	1/1:31,3:32:15.24:724,15,0	1/1:20,1:21:28.39:193,28,0	1/1:10,24:33:55.70:1117,56,0	1/1:3,17:20:17.97:276,18,0	1/1:27,2:29:22.37:345,22,0	1/1:23,2:25:28.81:275,29,0	1/1:30,3:33:51.32:371,51,0	1/1:6,31:37:59.44:855,59,0	1/1:23,0:23:36.93:186,37,0	1/1:28,0:27:28.99:190,29,0	1/1:26,0:26:22.73:114,23,0	0/1:20,2:19:5.33:358,0,5	1/1:16,3:19:32.69:332,33,0	1/1:67,10:77:91.82:757,92,0	1/1:20,3:23:35.69:297,36,0	1/1:3,16:19:24.55:368,25,0	1/1:10,34:44:53.84:764,54,0	1/1:33,0:33:36.93:186,37,0	1/1:23,0:23:52.79:386,53,0	1/1:28,1:29:29.38:364,29,0	1/1:7,1:8:11.26:94,11,0
chr10	8961803	.	C	CT	5395.94	PASS	AB=0.933;AC=15;AF=0.268;AN=56;BaseQRankSum=-11.959;DP=620;FS=1.544;HRun=7;HaplotypeScore=63.9746;InbreedingCoeff=0.9083;MQ=78.33;MQ0=0;MQRankSum=-1.815;QD=27.81;ReadPosRankSum=1.530;VQSLOD=5.6532;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,39:42:99:1232,102,0	0/0:9,0:9:24.01:0,24,224	0/0:33,0:32:55.41:0,55,495	0/1:13,1:12:32.28:32,0,118	1/1:1,23:24:40.13:732,40,0	1/1:4,26:30:78.24:942,78,0	1/1:5,20:25:57.17:682,57,0	0/0:27,0:27:63.08:0,63,601	0/0:14,0:14:36.03:0,36,341	0/0:28,0:28:60.07:0,60,572	0/0:16,0:16:36.01:0,36,338	0/0:25,0:25:72.08:0,72,682	0/0:24,0:24:63.08:0,63,602	0/0:18,0:18:54.07:0,54,516	0/0:23,0:23:69.10:0,69,662	1/1:2,16:18:42.13:507,42,0	0/0:23,0:23:63.03:0,63,587	1/1:0,11:11:33.10:399,33,0	0/0:17,0:17:33.05:0,33,319	0/0:32,0:32:75.09:0,75,719	0/0:20,0:20:54.08:0,54,521	0/0:14,0:14:39.05:0,39,372	0/0:13,0:13:27.02:0,27,254	0/0:19,0:19:57.08:0,57,546	1/1:0,30:30:72.22:869,72,0	0/0:27,0:27:75.12:0,75,724	0/0:26,0:26:75.12:0,75,724	0/0:18,0:18:42.02:0,42,392
chr10	8963460	.	TC	T	192.84	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=1.540;DP=484;FS=13.713;HRun=10;HaplotypeScore=81.6119;InbreedingCoeff=0.5158;MQ=83.68;MQ0=3;MQRankSum=2.347;QD=3.21;ReadPosRankSum=-1.115;VQSLOD=-0.6764;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:51.02:0,51,529	0/0:6,0:6:17.88:0,18,137	0/1:47,0:25:10.21:10,0,92	0/0:35,0:17:1.75:0,2,67	0/0:20,0:20:57.03:0,57,569	0/0:14,0:14:42.06:0,42,435	0/0:17,0:17:51.06:0,51,531	0/0:21,0:19:10.33:0,10,305	1/1:0,13:13:32.99:285,33,0	0/0:15,0:15:38.73:0,39,296	0/0:14,0:14:40.66:0,41,313	0/0:18,0:18:44.83:0,45,342	0/0:19,0:19:48.61:0,49,353	0/0:15,0:15:32.88:0,33,252	0/0:16,0:16:41.84:0,42,317	0/0:14,0:14:39:0,39,404	0/0:26,0:26:60.16:0,60,450	0/0:10,0:10:27.07:0,27,298	0/0:12,0:12:19.05:0,19,166	0/0:16,0:16:38.89:0,39,321	0/0:10,0:10:17.92:0,18,137	0/0:16,0:16:38.74:0,39,310	0/0:12,0:12:23.87:0,24,177	0/0:25,0:25:50.42:0,50,372	0/0:20,0:20:48.11:0,48,515	0/0:16,0:16:32.85:0,33,250	0/0:14,0:14:32.74:0,33,252	0/0:2,0:2:5.98:0,6,45
chr10	8963470	.	C	CA	5933.34	PASS	AB=0.896;AC=38;AF=0.679;AN=56;BaseQRankSum=-4.400;DP=535;FS=0.000;HRun=9;HaplotypeScore=77.4486;InbreedingCoeff=0.7708;MQ=78.85;MQ0=3;MQRankSum=1.557;QD=16.67;ReadPosRankSum=0.153;VQSLOD=4.9065;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:53.03:0,53,451	1/1:1,5:7:8.96:83,9,0	0/0:51,0:27:4.01:0,4,99	0/1:36,1:16:14.35:14,0,35	0/0:26,0:26:26.56:0,27,378	0/0:15,0:15:38.95:0,39,329	0/0:19,0:19:50.41:0,50,413	1/1:12,6:17:24.04:246,24,0	1/1:14,0:14:35.27:225,35,0	1/1:6,14:20:36.50:366,37,0	1/1:3,14:18:35.74:331,36,0	1/1:2,20:22:39.11:426,39,0	1/1:4,14:18:39.09:420,39,0	1/1:3,13:16:9.69:305,10,0	1/1:0,18:19:41.48:435,41,0	0/0:14,0:14:38.94:0,39,328	1/1:9,16:25:63.10:648,63,0	0/0:12,0:12:29.96:0,30,255	1/1:5,9:14:3.95:218,4,0	0/1:14,4:18:6.18:263,0,6	1/1:4,6:10:12.03:131,12,0	1/1:1,15:16:36.01:367,36,0	1/1:0,24:24:23.48:249,23,0	1/1:3,21:24:42.11:460,42,0	0/0:18,0:18:47.95:0,48,407	1/1:4,13:17:38.90:371,39,0	1/1:1,14:16:30.04:310,30,0	1/1:0,3:3:6.02:66,6,0
chr10	8964077	.	CAT	C	26794.31	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-1.595;DP=935;FS=3.054;HRun=0;HaplotypeScore=167.4746;InbreedingCoeff=0.9993;MQ=69.29;MQ0=2;MQRankSum=-7.070;QD=30.14;ReadPosRankSum=7.020;VQSLOD=6.2499;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,23:27:60.19:780,60,0	1/1:2,15:17:45.15:585,45,0	0/0:29,0:29:66.22:0,66,1070	0/0:17,0:17:30.84:0,31,425	1/1:9,31:40:87.28:1132,87,0	1/1:4,22:26:51.17:663,51,0	1/1:2,18:20:45.15:585,45,0	1/1:8,32:40:96.30:1233,96,0	1/1:41,0:41:37.61:345,38,0	1/1:7,46:53:99:1756,135,0	1/1:3,25:28:69.22:898,69,0	1/1:4,42:46:99:1561,120,0	1/1:4,44:48:99:1522,117,0	1/1:1,48:49:99:1795,138,0	1/1:9,43:52:99:1483,114,0	1/1:5,32:37:93.29:1198,93,0	1/1:2,13:15:36.12:468,36,0	1/1:4,13:17:30.10:390,30,0	1/1:1,12:13:36.10:454,36,0	1/1:7,52:59:99:1752,135,0	1/1:5,30:34:69.22:897,69,0	1/1:1,37:37:99:1327,102,0	1/1:5,33:38:87.17:1131,87,0	1/1:3,15:18:45.15:585,45,0	1/1:2,28:30:66.21:859,66,0	1/1:5,36:41:99:1405,108,0	1/1:8,38:46:99:1405,108,0	1/1:0,15:15:45.15:585,45,0
chr10	8964082	.	AT	A	407.73	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=8.369;DP=916;FS=3.735;HRun=1;HaplotypeScore=244.9205;InbreedingCoeff=0.2278;MQ=69.67;MQ0=2;MQRankSum=-6.560;QD=6.91;ReadPosRankSum=7.264;VQSLOD=0.7206;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:1.53:0,2,37	0/0:16,0:16:1.85:0,2,21	0/0:27,0:27:78.26:0,78,1206	0/0:18,0:18:37.61:0,38,607	0/0:36,1:37:9.88:0,10,109	0/0:25,0:25:7.88:0,8,99	0/1:18,0:18:0:1,0,0	0/0:41,0:41:28.20:0,28,345	1/1:13,28:41:7.15:488,7,0	0/0:52,0:52:18.26:0,18,266	0/0:27,0:27:4.36:0,4,48	0/0:48,0:48:15.19:0,15,186	0/0:49,0:49:12.42:0,12,134	0/0:51,0:51:5.77:0,6,96	0/0:48,0:48:12.32:0,12,175	0/0:38,0:38:15.69:0,16,188	0/0:15,0:15:5.15:0,5,58	0/0:17,0:17:5.33:0,5,59	0/0:13,0:13:5.21:0,5,51	0/0:58,0:58:16.85:0,17,204	0/0:32,0:31:4.46:0,4,74	0/0:40,0:39:6.71:0,7,98	0/0:35,0:35:4:0,4,75	0/0:16,0:16:1.74:0,2,19	0/0:30,0:30:4.55:0,5,75	0/0:39,0:39:6.55:0,7,102	0/0:44,0:44:12.46:0,12,175	0/0:16,0:16:2.06:0,2,36
chr10	8964084	.	ATAT	A	866.80	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.191;DP=918;FS=1.982;HRun=0;HaplotypeScore=281.0104;InbreedingCoeff=0.9941;MQ=70.52;MQ0=2;MQRankSum=-6.154;QD=18.84;ReadPosRankSum=-2.870;VQSLOD=2.8264;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:52.88:0,53,199	0/0:16,0:16:40.44:0,40,173	0/0:27,0:27:81.27:0,81,1798	0/0:19,0:19:21.03:0,21,826	0/0:36,0:37:74.69:0,75,379	0/0:24,0:24:48.42:0,48,214	0/0:19,0:19:40.44:0,40,172	0/0:41,0:41:99:0,107,644	1/1:19,27:46:29.16:961,29,0	0/0:52,0:52:99:0,133,688	0/0:25,0:25:57.39:0,57,205	0/0:48,0:48:99:0,117,603	0/0:48,0:48:99:0,109,502	0/0:51,0:51:99:0,124,527	0/0:48,0:48:99:0,110,530	0/0:38,0:38:92.87:0,93,483	0/0:15,0:15:35.96:0,36,187	0/0:16,0:16:30.97:0,31,175	0/0:12,0:12:30.31:0,30,120	0/0:56,0:56:99:0,124,533	0/0:33,0:32:66.41:0,66,307	0/0:40,0:39:93.86:0,94,416	0/0:36,0:36:81.09:0,81,369	0/0:15,0:15:37.43:0,37,134	0/0:30,0:30:60.92:0,61,289	0/0:38,0:38:95.73:0,96,408	0/0:45,0:46:95.49:0,95,547	0/0:17,0:17:43.45:0,43,210
chr10	8965374	.	A	AT	13193.14	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-14.855;DP=586;FS=6.800;HRun=6;HaplotypeScore=52.1015;InbreedingCoeff=0.9987;MQ=80.72;MQ0=0;MQRankSum=-0.667;QD=32.82;ReadPosRankSum=0.925;VQSLOD=4.9658;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:60.13:0,60,612	1/1:1,8:9:24.08:302,24,0	0/0:17,0:17:27:0,27,338	0/0:13,0:13:20.74:0,21,176	0/0:28,0:28:78.16:0,78,788	0/0:21,0:21:63.13:0,63,636	0/0:19,0:19:57.12:0,57,575	1/1:3,29:32:90.27:1117,90,0	1/1:4,13:17:39.12:491,39,0	1/1:1,23:24:69.22:865,69,0	1/1:4,23:27:69.22:868,69,0	1/1:0,22:22:60.19:755,60,0	1/1:2,20:22:60.19:755,60,0	1/1:5,17:22:48.15:599,48,0	1/1:1,28:29:84.27:1057,84,0	0/0:23,1:24:31.38:0,31,625	1/1:4,12:16:39.11:478,39,0	0/0:18,0:18:42.09:0,42,427	1/1:5,23:28:69.22:867,69,0	1/1:2,32:34:93.26:1152,93,0	1/1:1,11:12:33.11:415,33,0	1/1:0,20:20:57.18:717,57,0	1/1:3,15:18:45.14:566,45,0	1/1:0,14:14:36.12:453,36,0	0/0:19,0:19:48.11:0,48,490	1/1:4,14:18:39.12:491,39,0	1/1:3,19:22:51.16:642,51,0	1/1:0,16:16:48.15:604,48,0
chr10	8966313	.	TA	T	3215.21	PASS	AB=0.893;AC=17;AF=0.304;AN=56;BaseQRankSum=0.301;DP=484;FS=0.783;HRun=10;HaplotypeScore=149.9957;InbreedingCoeff=0.7228;MQ=77.92;MQ0=0;MQRankSum=-2.828;QD=16.24;ReadPosRankSum=0.012;VQSLOD=2.3356;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,26:28:68.82:597,69,0	0/0:6,0:6:5.51:0,6,123	0/1:15,4:17:80.01:80,0,124	0/1:14,1:13:10.40:10,0,80	1/1:6,29:35:89.97:779,90,0	1/1:2,20:22:62.99:546,63,0	1/1:4,14:18:44.97:387,45,0	0/0:25,1:26:36.83:0,37,596	0/0:10,1:11:4.03:0,4,273	0/0:22,0:22:60.16:0,60,664	0/0:18,1:19:25.05:0,25,484	0/0:9,0:9:27.07:0,27,299	0/0:16,0:16:38.66:0,39,415	0/1:10,1:11:1.98:2,0,208	0/0:16,0:16:29.84:0,30,322	1/1:6,12:19:10.83:308,11,0	0/0:17,0:17:42.07:0,42,451	1/1:3,15:18:47.98:416,48,0	0/0:23,0:23:57.14:0,57,621	0/0:17,0:17:42.06:0,42,444	0/0:7,0:7:12.02:0,12,125	0/0:11,1:12:10.06:0,10,339	0/0:17,0:17:48.09:0,48,518	0/0:15,0:15:24.02:0,24,252	1/1:2,11:13:32.99:286,33,0	0/0:28,1:29:49.13:0,49,755	0/0:15,1:16:15.96:0,16,368	0/0:8,0:8:24.01:0,24,251
chr10	8966369	.	CGTGTGTGTGTGT	C	12927.56	PASS	AB=0.781;AC=40;AF=0.800;AN=50;BaseQRankSum=6.398;DP=582;FS=2.295;HRun=0;HaplotypeScore=275.2303;InbreedingCoeff=0.0597;MQ=45.60;MQ0=17;MQRankSum=-6.095;QD=25.91;ReadPosRankSum=1.807;VQSLOD=4.0210;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:29:3.26:3,0,27	1/1:3,13:14:36.06:1141,36,0	./.	./.	0/1:21,0:33:23.52:24,0,167	0/1:10,0:14:12.05:12,0,220	0/1:20,0:27:8.60:9,0,278	./.	0/0:19,0:19:30.10:0,30,1262	1/1:17,6:26:33.10:1007,33,0	1/1:12,10:25:24.66:1370,25,0	1/1:7,11:19:27.02:826,27,0	1/1:9,13:22:30.02:931,30,0	1/1:8,8:18:26.26:911,26,0	1/1:11,11:23:21:620,21,0	0/1:11,0:15:52.84:53,0,259	0/1:19,7:29:99:553,0,114	0/1:14,0:16:19.84:20,0,199	1/1:13,5:16:14:236,14,0	1/1:8,7:15:21:639,21,0	1/1:11,3:13:3.01:104,3,0	1/1:8,10:19:41.98:1104,42,0	1/1:15,3:17:12.02:331,12,0	1/1:9,10:20:6.02:207,6,0	0/1:8,0:19:76.93:96,0,77	1/1:17,13:31:42.14:1423,42,0	1/1:7,7:16:27.09:790,27,0	1/1:1,11:11:15.05:518,15,0
chr10	8966969	.	GCTAC	G	6349.79	PASS	AB=0.988;AC=42;AF=0.750;AN=56;BaseQRankSum=-6.465;DP=550;FS=3.224;HRun=0;HaplotypeScore=145.8020;InbreedingCoeff=-0.0148;MQ=62.78;MQ0=5;MQRankSum=1.734;QD=12.38;ReadPosRankSum=0.719;VQSLOD=4.7232;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:24,1:24:93.11:93,0,266	1/1:5,2:7:8.99:76,9,0	0/0:25,0:16:17.44:0,17,263	0/0:12,0:10:20.90:0,21,170	1/1:30,0:28:38.89:315,39,0	0/1:18,0:17:99:141,0,148	0/1:20,0:19:53.68:213,0,54	1/1:34,0:33:86.87:754,87,0	0/1:16,0:16:10.62:86,0,11	0/1:28,0:27:11.71:415,0,12	1/1:20,0:17:0.79:128,1,0	1/1:12,9:20:2.97:280,3,0	1/1:5,14:16:8.69:82,9,0	1/1:17,6:20:33:356,33,0	1/1:18,3:20:43.53:361,44,0	0/1:21,0:21:99:228,0,183	0/1:21,0:20:99:214,0,117	0/1:12,0:11:51.81:52,0,236	1/1:10,2:8:17.97:176,18,0	1/1:17,9:22:20.84:206,21,0	1/1:6,4:10:6.01:108,6,0	1/1:10,5:14:14.98:125,15,0	0/1:11,1:12:37.17:60,0,37	1/1:8,0:8:11.97:97,12,0	0/1:23,0:20:99:157,0,257	1/1:24,8:26:72.05:871,72,0	1/1:17,13:24:48.01:566,48,0	1/1:8,1:9:20.92:191,21,0
chr10	8967010	.	CT	C	289.60	PASS	AB=0.834;AC=6;AF=0.111;AN=54;BaseQRankSum=2.814;DP=509;FS=3.300;HRun=1;HaplotypeScore=168.0236;InbreedingCoeff=-0.1680;MQ=39.24;MQ0=20;MQRankSum=-4.245;QD=2.19;ReadPosRankSum=0.154;VQSLOD=-0.6948;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:27:41.78:0,42,709	0/0:6,0:5:3.01:0,3,46	0/0:12,0:2:6.02:0,6,76	./.	0/0:26,0:25:8.45:0,8,137	0/0:25,0:24:18.06:0,18,284	0/0:15,0:13:12.61:0,13,229	0/1:36,6:22:14.29:14,0,742	0/1:17,0:17:0.89:1,0,320	0/0:20,0:16:48.11:0,48,638	0/0:24,0:18:14.75:0,15,232	0/0:17,5:17:14.86:0,15,151	0/1:10,7:13:45.03:72,0,45	0/0:10,9:12:14.41:0,14,147	0/0:14,0:12:15.02:0,15,189	0/0:17,0:16:39.11:0,39,605	0/0:14,1:13:18.06:0,18,283	0/0:19,0:18:15.49:0,15,476	0/0:9,3:4:8.79:0,9,56	0/0:16,4:17:2.86:0,3,15	0/0:8,0:8:5.74:0,6,42	0/0:13,1:13:2.92:0,3,45	0/0:19,1:19:5.99:0,6,95	0/0:4,0:4:3.01:0,3,46	0/0:33,0:30:27.08:0,27,414	0/1:16,8:17:99:160,0,274	0/1:20,6:19:48.51:49,0,237	0/1:5,1:6:45.29:108,0,45
chr10	8967019	.	TATC	T	1334.99	PASS	AB=0.989;AC=18;AF=0.333;AN=54;BaseQRankSum=0.636;DP=497;FS=21.021;HRun=0;HaplotypeScore=175.2520;InbreedingCoeff=0.2570;MQ=38.67;MQ0=14;MQRankSum=-2.113;QD=6.24;ReadPosRankSum=1.627;VQSLOD=0.9693;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:27:99:260,0,288	0/0:6,0:5:3.01:0,3,35	0/0:9,0:2:6.02:0,6,84	./.	0/1:26,0:25:0.20:0,0,0	0/0:11,13:23:12.04:0,12,190	0/1:15,0:13:99:163,0,121	0/0:44,0:23:41.34:0,41,447	1/1:15,0:15:27.12:359,27,0	0/1:16,0:13:75.25:124,0,75	1/1:20,0:15:3.12:45,3,0	0/0:24,0:18:11.49:0,11,77	0/0:17,0:13:8.73:0,9,115	0/0:19,0:11:1.84:0,2,43	1/1:9,3:10:6.01:71,6,0	0/1:18,0:17:99:239,0,241	0/0:13,0:10:9.03:0,9,145	0/1:19,0:18:99:190,0,321	1/1:8,0:3:3.47:29,3,0	0/0:26,0:23:15.49:0,15,192	0/0:9,0:9:5.45:0,5,26	1/1:12,0:11:0.47:1,0,0	0/1:18,2:19:0.02:0,0,1	0/1:3,0:3:0:0,0,0	0/0:11,23:31:24.08:0,24,378	0/0:22,0:15:20.90:0,21,265	0/0:25,0:18:12.30:0,12,203	0/0:5,0:5:10.74:0,11,123
chr10	8967022	.	C	CT	1293.21	PASS	AB=0.807;AC=17;AF=0.315;AN=54;BaseQRankSum=-0.826;DP=485;FS=13.921;HRun=1;HaplotypeScore=159.8094;InbreedingCoeff=0.1785;MQ=40.44;MQ0=13;MQRankSum=0.202;QD=6.07;ReadPosRankSum=0.036;VQSLOD=-0.7291;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:16,12:28:99:223,0,247	0/0:5,1:5:3.01:0,3,38	0/0:10,0:2:6.02:0,6,84	./.	0/1:2,0:23:0.12:0,0,1	0/0:23,0:22:12.04:0,12,168	0/1:7,8:13:68.56:156,0,69	0/0:41,0:22:32.70:0,33,454	1/1:10,7:17:30.67:377,31,0	0/1:7,4:9:68.76:105,0,69	1/1:13,5:14:1.73:43,2,0	0/0:24,0:18:7.49:0,7,64	0/0:15,0:11:8.63:0,9,93	0/0:20,0:12:11.95:0,12,103	1/1:10,2:10:6.01:72,6,0	0/1:9,10:18:99:227,0,211	0/0:10,2:9:9.03:0,9,123	0/1:11,9:18:99:219,0,209	0/1:8,0:3:8.32:11,0,8	0/0:25,0:22:16.05:0,16,191	0/0:9,0:9:5.37:0,5,26	0/1:10,1:10:0:0,0,0	0/1:15,2:16:0:0,0,1	0/1:1,2:3:0:0,0,0	0/0:35,0:32:23.99:0,24,326	0/0:20,0:13:37.21:0,37,345	0/0:26,0:19:26.92:0,27,246	0/1:5,0:5:0.71:1,0,99
chr10	8967029	.	CTATT	C	2178.99	PASS	AB=0.871;AC=28;AF=0.519;AN=54;BaseQRankSum=-1.170;DP=478;FS=7.426;HRun=0;HaplotypeScore=162.4136;InbreedingCoeff=0.0930;MQ=40.40;MQ0=13;MQRankSum=-1.443;QD=5.56;ReadPosRankSum=0.953;VQSLOD=2.2846;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:31,0:30:22.22:247,22,0	0/0:4,2:5:3:0,3,27	0/1:15,0:4:1.64:2,0,152	0/0:8,0:2:5.98:0,6,79	0/1:24,0:23:0.01:1,0,0	1/1:22,0:21:6.46:51,6,0	1/1:16,0:14:11.85:143,12,0	0/1:19,13:18:34.76:498,0,35	1/1:18,1:19:7.24:109,7,0	1/1:11,0:8:20.87:198,21,0	0/1:20,0:15:0.08:1,0,0	0/0:13,10:17:5.72:0,6,43	0/0:10,3:10:6.49:0,6,69	0/1:16,6:13:44.63:45,0,70	./.	0/1:18,0:17:25.87:161,0,26	1/1:5,4:6:5.95:42,6,0	0/1:20,1:19:6.94:121,0,7	1/1:6,2:3:5.23:64,5,0	0/0:15,8:20:18:0,18,160	0/1:8,2:10:0.17:0,0,0	0/1:5,5:9:0:0,0,0	0/1:16,0:15:0.07:0,0,0	0/0:2,0:3:0:0,0,0	0/1:37,0:34:8.40:114,0,8	0/1:11,8:12:99:354,0,100	0/1:17,8:17:99:146,0,113	0/1:4,1:4:26.69:27,0,81
chr10	8967030	.	TATTTATC	T	1746.19	PASS	AB=0.976;AC=26;AF=0.500;AN=52;BaseQRankSum=-0.590;DP=466;FS=8.154;HRun=0;HaplotypeScore=168.6653;InbreedingCoeff=-0.1168;MQ=40.39;MQ0=13;MQRankSum=-4.189;QD=4.45;ReadPosRankSum=-0.504;VQSLOD=2.0482;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:32,0:30:99:352,0,243	0/0:6,0:5:2.92:0,3,17	0/0:15,0:4:12.04:0,12,344	0/0:8,0:2:2.69:0,3,88	0/1:23,0:22:0.09:0,0,0	0/0:21,0:20:8.92:0,9,121	0/1:15,0:13:28.92:29,0,137	1/1:29,0:17:17.07:272,17,0	0/1:18,0:18:44.99:45,0,57	1/1:7,4:8:20.36:336,20,0	0/1:8,13:15:0.01:2,0,0	0/1:23,0:17:10.81:20,0,11	0/0:14,0:10:6:0,6,81	0/1:22,0:13:6.29:6,0,18	./.	0/1:18,0:17:99:223,0,228	1/1:9,0:6:5.95:42,6,0	0/1:19,0:17:22.18:22,0,106	1/1:8,0:3:5.88:44,6,0	0/1:23,0:20:4.23:4,0,66	0/1:10,0:10:0.09:0,0,0	0/1:10,0:9:0:0,0,0	1/1:5,11:15:5.51:40,6,0	./.	0/1:36,0:33:99:333,0,174	0/1:19,0:12:71.16:71,0,78	0/1:25,0:17:32.15:32,0,94	0/1:5,0:4:16.29:16,0,67
chr10	8967037	.	C	CT	2485.54	PASS	AB=0.812;AC=31;AF=0.620;AN=50;BaseQRankSum=1.977;DP=459;FS=4.471;HRun=1;HaplotypeScore=136.8779;InbreedingCoeff=0.2478;MQ=41.03;MQ0=13;MQRankSum=-4.294;QD=7.58;ReadPosRankSum=1.156;VQSLOD=0.9066;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:25,5:29:99:175,0,332	1/1:3,1:3:3.01:48,3,0	0/0:18,0:4:12.03:0,12,153	0/0:9,0:2:5.23:0,5,49	0/0:24,0:22:2.89:0,3,43	0/0:17,2:18:8.51:0,9,93	0/0:19,1:18:7.91:0,8,372	1/1:16,12:18:5.55:474,6,0	0/1:14,4:18:59.55:80,0,60	1/1:10,1:6:6.13:103,6,0	0/0:18,2:14:0.35:0,0,2	1/1:10,11:15:5.87:96,6,0	1/1:4,7:7:6.02:95,6,0	1/1:6,16:13:9.89:146,10,0	./.	0/1:15,6:20:99:158,0,389	./.	0/1:14,3:15:26.61:27,0,225	1/1:4,4:3:2.94:28,3,0	1/1:9,13:21:18.06:288,18,0	0/1:3,4:7:0:0,0,0	0/1:7,1:7:0:0,0,0	1/1:16,0:15:5.16:47,5,0	./.	0/1:33,7:38:99:179,0,301	1/1:8,9:11:17.26:285,17,0	1/1:10,11:13:17.95:265,18,0	1/1:1,4:4:8.96:144,9,0
chr10	8967157	.	C	CATCT	5322.62	PASS	AB=0.927;AC=24;AF=0.480;AN=50;BaseQRankSum=-5.250;DP=481;FS=8.652;HRun=0;HaplotypeScore=98.1818;InbreedingCoeff=0.6281;MQ=43.52;MQ0=10;MQRankSum=-0.272;QD=21.72;ReadPosRankSum=-0.890;VQSLOD=3.6782;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:12:8.99:0,9,109	1/1:5,2:7:11.06:260,11,0	0/0:10,0:1:3.01:0,3,38	./.	0/0:25,0:25:42.10:0,42,517	0/0:16,0:16:14.88:0,15,166	0/0:18,0:8:5.98:0,6,68	./.	0/0:14,0:13:27.09:0,27,425	0/0:17,0:15:2.68:0,3,6	0/1:21,0:19:0.18:3,0,0	1/1:9,4:8:18.06:362,18,0	1/1:14,3:9:15.05:325,15,0	1/1:12,4:11:12.04:235,12,0	0/0:10,0:4:0.04:0,0,1	0/0:24,0:21:48.16:0,48,699	1/1:8,3:9:18.06:399,18,0	0/0:10,0:8:18.06:0,18,249	./.	1/1:27,5:30:45.15:1076,45,0	1/1:14,1:12:15.05:360,15,0	1/1:7,6:10:21.07:495,21,0	1/1:23,0:23:2.56:9,3,0	0/1:9,0:6:0:0,0,0	0/0:29,0:26:38.61:0,39,533	1/1:21,7:18:30.10:713,30,0	0/1:25,6:26:44.84:949,0,45	0/1:7,1:6:39:135,0,39
chr10	8967186	.	A	AC	246.37	PASS	AB=0.947;AC=13;AF=0.241;AN=54;BaseQRankSum=8.283;DP=452;FS=3.787;HRun=0;HaplotypeScore=127.2148;InbreedingCoeff=0.2808;MQ=35.03;MQ0=36;MQRankSum=-7.274;QD=1.72;ReadPosRankSum=-3.756;VQSLOD=1.5482;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:16,1:11:14.83:0,15,141	0/0:7,0:5:1.69:0,2,53	0/0:6,0:1:3.01:0,3,42	./.	0/0:22,1:23:50.57:0,51,598	0/0:13,0:13:12.03:0,12,130	0/0:16,0:8:14.88:0,15,141	0/0:42,0:4:12.04:0,12,166	0/0:14,0:13:30.06:0,30,403	0/1:15,0:12:12.73:13,0,100	1/1:20,0:17:23.52:112,24,0	0/1:14,1:11:23.99:29,0,24	0/1:13,1:10:13.57:14,0,91	0/1:17,1:10:22.17:22,0,32	1/1:11,0:6:8.15:34,8,0	0/0:23,0:21:49.27:0,49,644	0/1:12,0:10:3.94:4,0,57	0/0:8,0:8:18.05:0,18,218	0/1:6,1:3:35.82:42,0,36	0/0:32,0:25:45.38:0,45,331	0/0:14,0:8:7.76:0,8,110	0/0:14,0:11:10.90:0,11,121	1/1:17,0:16:27.49:132,27,0	0/1:13,1:11:0.20:0,0,0	0/0:23,0:20:44.64:0,45,511	0/0:20,0:11:32.67:0,33,278	0/0:28,0:22:27.59:0,28,388	0/0:9,0:6:8.88:0,9,77
chr10	8967187	.	T	TC	2261.45	PASS	AB=0.767;AC=23;AF=0.426;AN=54;BaseQRankSum=0.266;DP=458;FS=4.693;HRun=0;HaplotypeScore=125.9012;InbreedingCoeff=0.3005;MQ=34.88;MQ0=38;MQRankSum=-0.437;QD=8.57;ReadPosRankSum=2.930;VQSLOD=3.5941;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:11,3:11:8.93:0,9,103	1/1:4,3:5:8.47:62,8,0	0/0:6,0:1:3.01:0,3,42	./.	0/0:15,2:22:41.32:0,41,309	0/0:13,0:13:11.72:0,12,91	0/0:9,4:8:8.99:0,9,104	0/0:39,3:4:12.01:0,12,147	0/0:13,1:13:30.07:0,30,404	0/1:4,10:12:88.58:391,0,89	1/1:5,18:20:29.66:478,30,0	0/1:13,3:12:15.03:164,0,15	0/1:10,4:10:43.07:89,0,43	1/1:14,4:10:10.83:104,11,0	1/1:3,9:6:7.40:141,7,0	0/0:17,4:21:45.66:0,46,393	0/1:10,4:11:0.05:157,0,0	0/0:8,1:9:18.62:0,19,158	0/1:6,1:3:6.99:7,0,36	0/1:23,10:26:19.44:19,0,54	1/1:10,4:8:8.28:28,8,0	1/1:12,3:12:12.17:68,12,0	1/1:0,16:16:33.03:525,33,0	0/1:6,8:11:0.20:0,0,0	0/0:18,2:20:35.20:0,35,300	0/1:15,3:11:60.56:66,0,61	0/1:19,8:22:99:141,0,148	0/0:8,1:6:1.05:0,1,55
chr10	8967195	.	CTATCATCTATCT	C	2767.72	PASS	AB=0.920;AC=12;AF=0.222;AN=54;BaseQRankSum=-6.032;DP=464;FS=15.032;HRun=0;HaplotypeScore=174.8771;InbreedingCoeff=0.2849;MQ=34.02;MQ0=43;MQRankSum=0.346;QD=18.58;ReadPosRankSum=-2.181;VQSLOD=1.7212;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:14,0:9:13.57:14,0,14	0/0:7,0:5:11.93:0,12,250	0/0:2,0:1:3.01:0,3,75	./.	1/1:11,5:21:39.09:890,39,0	1/1:1,12:13:12:220,12,0	0/0:15,0:8:3.01:0,3,100	0/0:43,0:4:12.04:0,12,310	0/0:13,0:12:25.64:0,26,579	0/1:16,0:14:99:159,0,384	0/0:25,0:22:27.93:0,28,456	0/1:16,0:12:0.53:1,0,153	0/0:17,0:12:17.89:0,18,301	0/0:18,0:10:2.37:0,2,202	0/0:11,0:5:9.03:0,9,136	0/1:17,4:20:69.72:768,0,70	0/0:19,0:14:13.22:0,13,194	0/1:7,0:8:28.14:198,0,28	0/0:8,0:4:6.02:0,6,126	0/0:34,0:27:46.66:0,47,1080	0/1:16,0:9:13.28:13,0,267	0/0:15,0:13:18.01:0,18,340	0/0:17,0:16:33.01:0,33,467	0/0:15,0:12:0:0,0,0	1/1:12,8:19:41.87:660,42,0	0/0:21,0:13:35.56:0,36,595	0/0:26,0:21:40.08:0,40,1042	0/0:8,0:5:12.04:0,12,351
chr10	8967196	.	TATC	T	325.02	PASS	AB=0.943;AC=13;AF=0.241;AN=54;BaseQRankSum=0.702;DP=465;FS=21.066;HRun=0;HaplotypeScore=149.5785;InbreedingCoeff=0.0377;MQ=33.95;MQ0=43;MQRankSum=-1.600;QD=1.85;ReadPosRankSum=-1.693;VQSLOD=1.1531;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:9:2.60:0,3,13	0/0:6,1:5:5.28:0,5,93	0/0:2,0:1:3.01:0,3,42	./.	0/1:21,0:21:6.48:106,0,6	1/1:14,0:14:6.31:31,6,0	0/0:16,0:8:3.01:0,3,65	0/0:43,0:4:12.04:0,12,168	0/0:13,0:12:27.06:0,27,363	0/1:15,0:14:1.65:2,0,153	0/0:25,0:22:7.35:0,7,87	0/0:14,2:12:1.98:0,2,69	0/1:13,4:12:28.26:28,0,196	0/0:14,4:10:8.36:0,8,104	0/0:11,0:5:2.76:0,3,14	0/1:21,0:19:30.28:105,0,30	0/0:17,2:14:10.02:0,10,95	1/1:10,0:8:13.72:91,14,0	0/1:7,1:4:10.16:10,0,21	0/0:27,7:27:47.54:0,48,703	0/0:12,4:9:10.55:0,11,216	0/0:14,1:13:17.76:0,18,231	0/0:17,0:16:2.86:0,3,73	0/1:16,0:12:0.10:0,0,0	0/1:20,0:19:18.25:74,0,18	0/0:20,2:14:3.20:0,3,262	0/1:19,7:21:10.99:11,0,544	0/1:8,0:5:1.07:1,0,74
chr10	8967198	.	TCATC	T	816.38	PASS	AB=0.992;AC=15;AF=0.278;AN=54;BaseQRankSum=4.126;DP=460;FS=6.559;HRun=0;HaplotypeScore=150.9546;InbreedingCoeff=0.2487;MQ=33.73;MQ0=43;MQRankSum=-3.818;QD=4.92;ReadPosRankSum=1.163;VQSLOD=2.1528;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:9:2.77:0,3,9	0/1:7,0:5:21.52:22,0,38	0/0:2,0:1:2.92:0,3,17	./.	0/1:21,0:21:38.20:43,0,38	0/0:14,0:14:2.21:0,2,13	0/0:16,0:8:3.01:0,3,45	0/0:41,0:4:11.95:0,12,92	0/0:13,0:12:25.62:0,26,215	1/1:10,5:14:7.55:373,8,0	1/1:15,10:22:17.70:129,18,0	0/1:16,0:12:5.70:6,0,26	0/0:17,0:12:14.92:0,15,127	0/0:18,0:10:4.72:0,5,48	1/1:4,7:5:8.54:85,9,0	0/0:21,0:19:31.51:0,32,152	0/0:18,0:13:9.63:0,10,97	0/0:9,0:7:8.45:0,8,24	0/1:8,0:4:17.53:18,0,52	0/0:34,0:27:46.25:0,46,386	0/0:16,0:10:9.70:0,10,125	0/0:15,0:13:12.90:0,13,122	1/1:10,7:16:23.21:157,23,0	0/1:17,1:13:0.13:0,0,0	0/0:19,0:18:19.79:0,20,85	0/1:20,0:13:99:103,0,133	0/0:25,0:21:3.44:0,3,260	0/1:8,0:5:26.98:40,0,27
chr10	8967206	.	CT	C	399.53	PASS	AB=0.888;AC=9;AF=0.173;AN=52;BaseQRankSum=4.919;DP=495;FS=2.984;HRun=1;HaplotypeScore=163.2161;InbreedingCoeff=0.4511;MQ=32.11;MQ0=50;MQRankSum=-4.338;QD=3.96;ReadPosRankSum=0.057;VQSLOD=0.1789;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,3:7:0.29:2,0,0	0/0:9,1:8:13.18:0,13,158	./.	./.	0/0:16,3:19:27.54:0,28,363	0/0:15,0:14:9.02:0,9,103	0/0:14,7:9:2.77:0,3,48	0/0:50,0:9:27.07:0,27,367	0/0:11,0:10:18.05:0,18,254	0/1:15,3:17:99:196,0,217	0/1:20,4:22:5.69:152,0,6	0/0:16,2:14:6.90:0,7,84	0/0:15,4:14:14.19:0,14,224	0/0:14,4:11:8.46:0,8,119	1/1:11,0:4:2.93:41,3,0	0/0:14,4:16:29.37:0,29,435	0/0:18,2:15:13.29:0,13,152	0/0:8,1:6:11.97:0,12,150	0/0:12,1:7:15.40:0,15,144	0/0:35,7:35:47.42:0,47,657	0/0:12,4:10:12.10:0,12,190	0/0:15,1:15:17.79:0,18,237	1/1:9,7:15:9.03:125,9,0	0/1:18,1:14:0.31:0,0,0	0/0:17,2:18:21.51:0,22,298	0/0:20,2:15:31.52:0,32,421	0/0:21,7:24:48.58:0,49,735	0/0:10,0:6:10.80:0,11,142
chr10	8967237	.	T	TC	633.76	PASS	AB=0.811;AC=23;AF=0.442;AN=52;BaseQRankSum=4.501;DP=522;FS=2.551;HRun=0;HaplotypeScore=204.3070;InbreedingCoeff=-0.0741;MQ=29.31;MQ0=39;MQRankSum=1.048;QD=2.11;ReadPosRankSum=-1.999;VQSLOD=2.7846;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:8,2:7:3.39:0,3,10	0/1:6,6:10:36.79:37,0,51	./.	./.	0/0:10,7:16:1.23:0,1,3	1/1:12,3:14:5.79:58,6,0	0/0:16,0:5:2.82:0,3,25	0/0:46,0:13:39.13:0,39,545	0/1:4,2:5:7.95:8,0,25	0/1:22,3:25:99:100,0,223	0/0:27,1:27:3.44:0,3,41	0/1:16,3:14:14.42:55,0,14	0/1:14,9:17:5.36:85,0,5	1/1:14,4:13:0.03:2,0,0	1/1:16,2:9:2.82:23,3,0	0/1:10,7:13:32.81:53,0,33	0/0:19,7:18:2.01:0,2,138	1/1:5,3:6:6.60:55,7,0	0/1:12,1:9:17.46:17,0,128	0/0:41,10:44:39.61:0,40,235	0/1:11,2:7:0.12:0,0,38	0/0:18,3:20:3.86:0,4,19	0/1:11,0:11:0.03:0,0,0	0/1:15,4:13:0.29:0,0,0	1/1:12,6:17:12.01:133,12,0	0/1:21,2:18:11.91:12,0,233	0/1:15,9:20:16.04:16,0,173	0/1:8,8:12:37.29:117,0,37
chr10	8967246	.	TATC	T	336.07	PASS	AB=0.977;AC=14;AF=0.269;AN=52;BaseQRankSum=4.431;DP=552;FS=1.607;HRun=0;HaplotypeScore=216.2042;InbreedingCoeff=-0.1427;MQ=29.77;MQ0=40;MQRankSum=0.087;QD=1.42;ReadPosRankSum=-3.156;VQSLOD=2.0385;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:13,0:9:35.09:35,0,45	0/0:10,3:11:19.23:0,19,277	./.	./.	0/0:19,0:18:0.18:0,0,1	1/1:14,0:13:4.30:52,4,0	0/0:17,0:4:0:0,0,0	0/0:51,0:13:39.13:0,39,545	0/0:6,0:4:2.86:0,3,24	0/1:29,0:28:99:106,0,183	0/0:30,0:28:8.19:0,8,113	0/1:20,0:15:13.28:13,0,57	0/1:20,3:17:34.40:34,0,106	0/0:18,1:14:3.64:0,4,41	0/1:18,0:10:5.45:44,0,5	0/1:18,0:14:39.83:40,0,48	0/0:24,2:17:4.60:0,5,165	0/1:10,0:7:21.02:21,0,29	0/0:12,1:9:4.05:0,4,213	0/0:45,8:46:45.36:0,45,658	0/0:11,2:7:2.40:0,2,90	0/1:25,0:23:25.46:25,0,57	0/0:13,0:12:2.68:0,3,11	1/1:23,0:17:3.08:9,3,0	0/1:20,0:19:39.40:67,0,39	0/1:21,3:19:22.69:23,0,479	0/0:20,5:21:16.50:0,17,308	0/0:14,2:10:1.46:0,1,129
chr10	8967248	.	TCATC	T	434.79	PASS	AB=0.927;AC=19;AF=0.365;AN=52;BaseQRankSum=5.594;DP=542;FS=1.450;HRun=0;HaplotypeScore=213.4764;InbreedingCoeff=-0.2174;MQ=30.23;MQ0=40;MQRankSum=-0.181;QD=1.20;ReadPosRankSum=-1.061;VQSLOD=2.7515;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:8:5.99:0,6,31	0/0:10,2:10:19.24:0,19,284	./.	./.	0/1:19,0:18:0.01:1,0,0	0/0:14,0:13:5.55:0,6,20	0/1:16,0:4:0:0,0,0	0/0:50,0:13:38.91:0,39,316	1/1:6,0:4:2.94:18,3,0	0/1:29,0:28:82.45:82,0,100	0/1:30,0:28:24.40:24,0,51	0/1:15,4:14:55.75:62,0,56	0/1:17,6:17:23.24:23,0,57	0/1:16,3:14:7.27:7,0,49	0/1:17,0:9:6.60:10,0,7	0/0:18,0:14:0.74:0,1,30	0/0:24,2:17:10.23:0,10,182	0/1:10,0:7:32.75:33,0,74	0/1:12,0:8:23:23,0,124	0/1:50,2:46:0.38:0,0,623	0/0:13,0:7:1.13:0,1,74	0/1:21,3:23:2.37:2,0,73	0/0:13,0:12:2.04:0,2,6	1/1:21,0:15:5.89:45,6,0	0/0:20,0:19:5.79:0,6,70	0/1:25,0:19:70.02:70,0,316	0/1:19,6:21:52.30:52,0,232	0/1:11,5:10:99:115,0,131
chr10	8967260	.	C	CTAT	1308.90	PASS	AB=0.980;AC=22;AF=0.423;AN=52;BaseQRankSum=1.472;DP=601;FS=0.000;HRun=0;HaplotypeScore=231.9538;InbreedingCoeff=-0.2524;MQ=33.94;MQ0=38;MQRankSum=1.968;QD=3.15;ReadPosRankSum=4.874;VQSLOD=1.7847;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:14,0:9:7.92:8,0,89	0/1:14,0:12:0.41:0,0,198	./.	./.	1/1:17,0:16:8.92:65,9,0	1/1:17,0:16:10.19:167,10,0	1/1:21,0:8:2.71:19,3,0	0/0:53,0:11:27.06:0,27,370	0/0:5,0:4:8.58:0,9,59	0/1:31,4:35:99:374,0,361	0/0:37,0:36:35.48:0,35,416	0/1:23,0:18:13.26:13,0,59	0/1:30,0:23:14.45:14,0,259	0/0:20,0:15:12.43:0,12,123	0/1:13,5:12:8.16:186,0,8	0/1:19,0:15:6.50:198,0,7	0/0:25,0:17:3.20:0,3,52	0/1:10,0:9:63.83:66,0,64	0/1:13,0:10:21.05:21,0,144	0/1:52,0:48:18.53:19,0,310	0/1:14,0:10:13.78:14,0,16	0/1:25,0:24:0.44:0,0,65	0/0:19,0:18:5.65:0,6,55	0/0:23,1:18:11.58:0,12,147	0/1:18,0:17:46.16:173,0,46	0/1:31,0:23:46.80:47,0,307	0/1:26,0:23:54.16:54,0,220	0/1:16,0:11:21.77:22,0,152
chr10	8967268	.	CT	C	1565.67	PASS	AB=0.899;AC=16;AF=0.308;AN=52;BaseQRankSum=4.759;DP=580;FS=4.269;HRun=1;HaplotypeScore=219.6661;InbreedingCoeff=-0.1916;MQ=36.96;MQ0=33;MQRankSum=-3.470;QD=4.13;ReadPosRankSum=-0.201;VQSLOD=-0.0645;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:9:11.33:0,11,78	0/1:12,2:12:99:109,0,319	./.	./.	0/0:15,0:14:7.02:0,7,29	0/0:13,0:12:11.37:0,11,41	0/0:14,2:5:3.11:0,3,8	0/1:40,8:12:35.20:35,0,360	1/1:3,5:6:8.81:126,9,0	0/1:40,0:39:99:226,0,276	0/0:41,0:40:32.47:0,32,365	0/1:12,10:17:29.78:201,0,30	0/1:25,5:22:79.26:79,0,293	0/1:16,4:16:99:152,0,115	1/1:20,0:14:9.06:225,9,0	0/0:13,0:11:17.73:0,18,95	0/1:21,3:17:39.14:39,0,169	0/0:12,0:9:15.78:0,16,180	0/0:14,0:11:5.49:0,5,178	0/1:51,0:47:72.10:72,0,738	0/0:11,1:10:3.33:0,3,77	0/1:24,2:25:99:115,0,131	0/0:18,0:17:2.86:0,3,22	0/0:18,0:13:8.41:0,8,98	0/0:13,0:13:23.05:0,23,114	0/1:36,0:28:35.76:36,0,516	0/1:21,4:22:99:203,0,295	0/1:15,0:11:99:101,0,197
chr10	8967269	.	TATCTATCTATCTATCTATCTATC	T	6277.58	PASS	AB=0.959;AC=23;AF=0.442;AN=52;BaseQRankSum=3.727;DP=582;FS=14.436;HRun=0;HaplotypeScore=319.4225;InbreedingCoeff=-0.3863;MQ=37.03;MQ0=32;MQRankSum=-3.406;QD=13.68;ReadPosRankSum=-1.406;VQSLOD=1.9393;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:13,0:9:12.70:13,0,37	0/1:14,0:12:12.92:13,0,1149	./.	./.	0/1:15,0:14:29.94:53,0,30	1/1:13,0:12:11.92:249,12,0	0/1:16,0:5:13.93:14,0,36	0/0:50,0:15:11.75:0,12,536	0/0:9,0:7:11.47:0,11,111	0/1:16,24:39:99:2172,0,632	0/1:21,20:40:96.01:96,0,921	0/1:22,0:17:99:235,0,130	0/1:30,0:22:99:110,0,738	0/1:20,0:16:87.96:88,0,253	1/1:19,0:14:27.09:912,27,0	1/1:12,0:10:14.37:335,14,0	0/1:24,0:17:51.29:51,0,419	0/0:12,0:9:14.80:0,15,319	0/1:14,0:11:99:308,0,372	0/1:51,0:47:35.28:35,0,2534	0/0:12,0:10:2.49:0,2,345	0/1:26,0:25:42.53:43,0,285	0/0:3,15:17:2.85:0,3,131	0/0:18,0:13:12:0,12,477	0/1:13,0:13:98.19:299,0,98	0/1:36,0:28:99:702,0,943	0/1:25,0:22:99:296,0,1031	0/1:15,0:11:99:256,0,593
chr10	8967272	.	CT	C	2303.91	PASS	AB=0.719;AC=14;AF=0.269;AN=52;BaseQRankSum=0.587;DP=580;FS=8.769;HRun=1;HaplotypeScore=218.5176;InbreedingCoeff=0.3600;MQ=37.81;MQ0=33;MQRankSum=-2.966;QD=11.94;ReadPosRankSum=-3.023;VQSLOD=0.6171;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:8,7:11:34.82:113,0,35	0/0:15,0:13:38.64:0,39,463	./.	./.	1/1:1,15:15:20.99:293,21,0	1/1:3,10:12:30.10:399,30,0	1/1:9,6:5:5.86:84,6,0	0/0:50,0:15:41.99:0,42,566	0/0:8,1:7:12.03:0,12,139	0/1:32,6:38:72.62:466,0,73	0/1:34,5:38:3.98:4,0,285	0/0:22,0:17:22.21:0,22,136	0/0:30,0:23:38.73:0,39,446	0/0:18,0:15:21.94:0,22,221	1/1:4,15:14:10.33:322,10,0	0/1:0,12:10:15.47:328,0,15	0/0:24,0:17:20.66:0,21,229	0/1:10,2:9:25.08:25,0,178	0/0:16,0:13:14.47:0,14,162	0/0:50,0:47:70.11:0,70,872	0/0:13,0:11:5.93:0,6,123	0/0:25,0:24:28.86:0,29,222	0/0:18,0:17:2.86:0,3,22	0/0:13,2:12:8.41:0,8,98	0/1:1,12:13:8.72:434,0,9	0/0:35,1:28:55.16:0,55,639	0/0:25,0:22:52.64:0,53,537	0/0:13,0:10:29.21:0,29,289
chr10	8967273	.	TATCTATCTATCTATCTATC	T	9442.53	PASS	AB=0.947;AC=21;AF=0.404;AN=52;BaseQRankSum=-2.591;DP=586;FS=24.677;HRun=0;HaplotypeScore=284.6136;InbreedingCoeff=-0.5461;MQ=37.91;MQ0=34;MQRankSum=-3.130;QD=19.51;ReadPosRankSum=-0.418;VQSLOD=2.2935;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:11:12.32:0,12,115	0/1:16,0:14:99:344,0,1031	./.	./.	0/0:16,0:15:23.26:0,23,226	0/1:15,0:14:99:142,0,202	0/0:17,0:6:8.75:0,9,90	0/1:50,0:15:99:374,0,320	0/1:9,0:7:9.04:9,0,37	0/1:38,0:38:99:1467,0,452	0/1:39,0:38:49.73:50,0,706	0/1:22,0:17:99:744,0,129	0/1:28,0:22:99:513,0,658	0/1:18,0:15:99:450,0,240	1/1:19,0:14:26.67:460,27,0	0/1:13,0:11:99:156,0,181	0/1:24,0:17:99:216,0,376	0/0:12,0:9:17.97:0,18,284	0/1:6,10:13:99:514,0,323	0/1:30,20:47:99:327,0,2350	0/1:12,0:10:36.21:36,0,340	0/1:25,0:24:99:332,0,281	0/0:18,0:17:2.77:0,3,111	0/0:15,0:12:11.59:0,12,356	0/1:13,0:13:99:202,0,315	0/1:17,19:28:99:1361,0,785	0/1:27,0:23:99:1053,0,893	0/1:13,0:10:99:693,0,545
chr10	8967289	.	TATC	T	5321.80	PASS	AB=0.917;AC=18;AF=0.333;AN=54;BaseQRankSum=-0.290;DP=587;FS=9.736;HRun=0;HaplotypeScore=208.7868;InbreedingCoeff=-0.3782;MQ=42.02;MQ0=22;MQRankSum=-2.358;QD=13.21;ReadPosRankSum=-2.649;VQSLOD=3.0015;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:13:12.04:0,12,167	0/1:13,2:15:99:222,0,308	./.	0/0:4,0:1:3.01:0,3,42	0/0:22,0:20:36.12:0,36,502	0/0:15,0:14:33.11:0,33,473	0/0:12,0:6:9.03:0,9,126	0/1:50,0:22:26.66:676,0,27	0/1:11,0:9:22.05:22,0,226	0/1:37,0:36:11.93:735,0,12	0/0:33,0:33:8.78:0,9,200	0/1:19,4:19:34.16:291,0,34	0/1:20,7:22:99:254,0,193	0/1:13,3:14:93.31:271,0,93	1/1:18,0:13:29.97:354,30,0	0/0:17,0:15:42.14:0,42,570	0/1:17,2:13:60.12:114,0,60	0/0:16,0:13:7.18:0,7,331	0/1:13,0:13:69.80:283,0,70	0/1:41,2:43:99:111,0,649	0/1:13,0:12:99:108,0,180	0/1:24,3:26:92.97:309,0,93	0/0:17,0:16:2.86:0,3,18	0/1:18,0:17:62.35:161,0,62	0/0:21,0:20:54.18:0,54,778	0/1:32,0:28:99:580,0,178	0/1:23,6:27:99:563,0,263	0/1:7,5:12:99:266,0,198
chr10	8967292	.	C	CT	5527.03	PASS	AB=0.798;AC=24;AF=0.444;AN=54;BaseQRankSum=-0.478;DP=569;FS=10.622;HRun=1;HaplotypeScore=182.4127;InbreedingCoeff=-0.1147;MQ=43.02;MQ0=25;MQRankSum=-3.335;QD=13.42;ReadPosRankSum=-3.188;VQSLOD=2.2123;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:14,0:12:14.42:14,0,152	0/1:10,7:17:99:218,0,111	./.	0/0:5,0:1:3.01:0,3,42	0/0:23,0:21:36.04:0,36,502	0/0:15,0:14:36.10:0,36,469	0/0:13,0:6:7.64:0,8,123	0/1:17,30:22:34.52:622,0,35	0/1:8,2:9:19.17:19,0,230	0/1:31,4:33:78.18:849,0,78	0/0:31,0:31:21.03:0,21,256	1/1:8,15:19:14.05:261,14,0	0/1:18,8:21:99:229,0,126	0/1:7,7:13:91.19:262,0,91	1/1:3,13:13:30.10:443,30,0	0/0:17,0:15:42.14:0,42,569	1/1:13,5:13:11.44:232,11,0	0/1:14,0:12:3.98:4,0,300	0/1:12,0:12:18.18:239,0,18	0/1:35,6:41:99:184,0,171	0/1:5,10:14:73.78:102,0,74	1/1:17,7:23:7.31:303,7,0	0/0:17,0:16:2.93:0,3,39	0/1:10,7:17:99:137,0,106	0/0:22,0:21:57.19:0,57,765	1/1:25,3:25:8.01:655,8,0	0/1:13,15:27:37.08:528,0,37	0/1:10,2:12:63.93:222,0,64
chr10	8967381	.	CATCT	C	2641.57	PASS	AB=0.950;AC=17;AF=0.327;AN=52;BaseQRankSum=7.561;DP=763;FS=5.789;HRun=0;HaplotypeScore=145.3875;InbreedingCoeff=0.6919;MQ=51.62;MQ0=16;MQRankSum=2.462;QD=9.20;ReadPosRankSum=-1.924;VQSLOD=2.5851;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:7,14:19:21.02:318,21,0	0/0:7,0:12:18.05:0,18,288	./.	./.	1/1:14,24:36:53.97:779,54,0	1/1:10,13:24:21.06:308,21,0	1/1:14,8:20:12.04:187,12,0	0/0:48,0:34:18.01:0,18,216	0/0:9,0:20:45.09:0,45,705	0/0:53,0:50:75.22:0,75,1611	0/1:32,2:30:48.31:48,0,758	0/0:28,0:24:42.60:0,43,909	0/0:32,0:31:51.23:0,51,1054	0/0:30,0:26:53.73:0,54,1066	0/0:20,0:21:9.03:0,9,173	1/1:9,21:29:42.14:645,42,0	0/1:21,1:17:16.72:17,0,503	1/1:13,5:15:24.03:326,24,0	0/0:21,0:18:18.06:0,18,392	0/1:36,2:36:28.99:29,0,1157	0/0:30,0:27:36.08:0,36,749	0/0:15,0:15:21.06:0,21,447	0/0:25,0:24:42.14:0,42,895	0/0:27,0:23:24.07:0,24,489	1/1:15,0:38:20.86:176,21,0	0/0:37,0:34:48.13:0,48,937	0/0:36,0:35:61.24:0,61,1079	0/0:10,0:9:2.98:0,3,21
chr10	8968270	.	A	AAAACAAAC	7920.39	PASS	AB=0.730;AC=15;AF=0.268;AN=56;BaseQRankSum=-1.355;DP=654;FS=5.087;HRun=0;HaplotypeScore=162.9110;InbreedingCoeff=0.8701;MQ=67.36;MQ0=3;MQRankSum=-10.343;QD=39.40;ReadPosRankSum=-2.832;VQSLOD=4.0656;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,5:16:11.93:377,12,0	0/0:5,0:5:12.04:0,12,303	0/0:29,0:25:15.05:0,15,360	0/0:24,0:21:15.01:0,15,261	1/1:13,14:29:48.16:1824,48,0	1/1:20,18:41:57.20:2230,57,0	1/1:16,4:21:12.04:473,12,0	0/0:39,0:39:47.89:0,48,1020	1/1:6,0:22:41.95:343,42,0	0/0:23,0:23:42.14:0,42,1052	0/0:18,0:19:30.10:0,30,739	0/0:24,0:26:60.21:0,60,1401	0/0:27,0:27:57.18:0,57,1351	0/0:17,0:17:33.11:0,33,834	0/0:23,0:23:45.15:0,45,1085	1/1:10,9:20:18.95:694,19,0	0/0:20,0:20:36.11:0,36,832	0/1:17,7:27:12.31:553,0,12	0/0:21,0:20:8.07:0,8,226	0/0:25,0:26:60.19:0,60,1440	0/0:19,0:19:44.99:0,45,969	0/0:5,0:5:9.03:0,9,219	0/0:23,0:23:39.13:0,39,980	0/0:28,0:28:42.14:0,42,1023	1/1:15,8:25:39.13:1428,39,0	0/0:29,0:29:45.14:0,45,1024	0/0:32,0:31:69.24:0,69,1626	0/0:18,0:18:45.11:0,45,973
chr10	8968540	.	TA	T	2990.80	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=5.893;DP=522;FS=2.494;HRun=5;HaplotypeScore=75.6967;InbreedingCoeff=0.9933;MQ=74.49;MQ0=0;MQRankSum=0.403;QD=27.95;ReadPosRankSum=2.725;VQSLOD=3.9989;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:33.11:0,33,451	0/0:7,0:7:21.07:0,21,287	0/0:10,0:10:26.55:0,27,242	0/0:16,0:15:14.57:0,15,411	0/0:27,0:27:72.20:0,72,954	0/0:22,0:22:66.22:0,66,902	0/0:11,0:11:33.11:0,33,451	0/0:33,0:33:84.27:0,84,1134	0/0:21,0:21:63.21:0,63,861	1/1:0,29:29:87.21:961,87,0	1/1:0,27:27:69.19:776,69,0	0/0:11,0:11:33.08:0,33,418	0/0:17,0:17:45.14:0,45,595	0/0:10,0:10:30.10:0,30,410	1/1:2,19:21:48.14:544,48,0	0/0:11,0:11:30.10:0,30,410	0/0:22,0:22:63.18:0,63,829	0/0:18,0:18:54.08:0,54,676	0/0:14,0:14:39.10:0,39,501	0/0:40,0:40:99:0,111,1517	0/0:8,0:8:24.03:0,24,291	0/0:15,0:15:45.15:0,45,615	1/1:1,19:20:54.15:612,54,0	1/1:0,10:10:24.07:272,24,0	0/0:19,0:19:51.17:0,51,697	0/0:23,0:23:69.23:0,69,943	0/0:33,0:32:90.24:0,90,1190	0/0:15,0:15:39.12:0,39,531
chr10	8969048	.	A	AC	1989.02	PASS	AB=0.837;AC=35;AF=0.625;AN=56;BaseQRankSum=-2.719;DP=396;FS=2.014;HRun=8;HaplotypeScore=71.1807;InbreedingCoeff=0.5806;MQ=71.72;MQ0=5;MQRankSum=2.318;QD=8.19;ReadPosRankSum=2.678;VQSLOD=1.1953;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:5.98:0,6,50	1/1:6,0:6:5.85:43,6,0	0/0:34,0:23:28.56:0,29,334	0/0:16,0:8:11.98:0,12,101	0/0:14,0:14:5.69:0,6,68	0/0:13,0:13:29.67:0,30,200	0/0:10,0:10:8.88:0,9,61	1/1:23,0:23:2.24:74,2,0	0/1:4,10:13:12.41:123,0,12	1/1:6,10:16:35.99:375,36,0	1/1:1,4:5:6.02:69,6,0	1/1:10,0:10:2.84:14,3,0	1/1:12,0:12:2.84:14,3,0	1/1:13,2:16:28.45:187,28,0	1/1:9,3:12:27.08:308,27,0	0/0:10,0:10:14.67:0,15,96	1/1:25,0:26:15.65:162,16,0	0/0:10,0:10:5.04:0,5,36	0/1:16,0:17:14.82:16,0,15	1/1:2,0:12:11.87:79,12,0	1/1:14,1:16:16.51:142,17,0	1/1:4,1:5:8.52:67,9,0	1/1:0,8:8:11.77:138,12,0	1/1:1,6:7:9.03:104,9,0	0/0:22,0:23:10.72:0,11,69	0/1:12,1:13:1.08:77,0,1	1/1:17,0:17:19.49:171,19,0	1/1:1,0:7:2.84:14,3,0
chr10	8969055	.	C	CCCCT	4198.74	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=-4.948;DP=405;FS=8.480;HRun=0;HaplotypeScore=92.6373;InbreedingCoeff=0.6089;MQ=63.23;MQ0=13;MQRankSum=2.038;QD=18.10;ReadPosRankSum=-4.250;VQSLOD=1.6914;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:24:8.73:0,9,72	1/1:2,4:6:5.89:95,6,0	0/0:31,0:21:31.17:0,31,658	0/0:12,0:4:4.23:0,4,107	0/0:13,0:12:11.69:0,12,97	0/0:13,0:11:30.01:0,30,406	0/0:10,0:10:11.71:0,12,130	1/1:24,0:22:16.67:509,17,0	0/1:15,0:14:14.94:15,0,64	0/1:14,0:14:9.69:10,0,78	0/1:8,0:7:1.71:2,0,25	1/1:2,8:12:3.01:80,3,0	1/1:0,14:16:3.48:79,3,0	1/1:18,0:18:36.48:525,36,0	0/0:10,0:10:9.32:0,9,88	0/0:9,0:9:15.01:0,15,158	1/1:24,0:24:56.93:817,57,0	0/0:11,0:11:4.34:0,4,73	1/1:19,0:18:5.67:411,6,0	1/1:10,0:9:14.86:103,15,0	1/1:19,0:19:2.13:400,2,0	1/1:4,0:4:12.02:140,12,0	0/0:9,0:8:9.72:0,10,36	0/0:8,0:8:13.95:0,14,96	0/0:22,0:22:12:0,12,124	1/1:17,0:16:29.97:310,30,0	1/1:21,0:22:48.96:640,49,0	1/1:4,0:4:3.01:62,3,0
chr10	8969058	.	CTCTCTGTG	C	1401.51	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=-0.354;DP=392;FS=4.998;HRun=0;HaplotypeScore=101.0284;InbreedingCoeff=0.6856;MQ=56.07;MQ0=15;MQRankSum=-4.139;QD=12.29;ReadPosRankSum=2.947;VQSLOD=1.8470;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:4,22:25:3.01:83,3,0	0/0:7,0:7:9.03:0,9,246	0/0:26,0:16:30.07:0,30,616	0/0:12,0:4:9.03:0,9,134	1/1:3,0:11:6:91,6,0	1/1:10,1:11:30.08:557,30,0	1/1:1,10:12:12.04:273,12,0	0/0:23,0:21:48.06:0,48,785	0/0:17,0:16:27.09:0,27,685	0/0:11,0:11:33.07:0,33,502	0/0:7,0:6:11.98:0,12,138	0/0:11,0:11:11.98:0,12,449	0/0:15,0:15:9.03:0,9,296	0/0:18,0:18:33.03:0,33,889	0/1:10,0:10:9.40:9,0,324	1/1:0,0:7:12.02:153,12,0	0/0:23,0:23:54.18:0,54,1233	1/1:1,9:10:6.02:175,6,0	0/0:18,0:17:39.09:0,39,695	0/0:10,0:9:3.01:0,3,120	0/0:20,0:19:33.58:0,34,742	0/0:3,0:3:3.01:0,3,49	0/0:11,0:9:13.14:0,13,186	0/0:9,0:9:6.74:0,7,116	1/1:0,22:23:9.03:234,9,0	0/0:16,0:15:36.01:0,36,730	0/0:19,0:19:46.71:0,47,1180	0/0:2,0:2:3.01:0,3,82
chr10	8970248	.	T	TTAAGAGTTGACTGTAGCCTGGGCGT	17281.57	PASS	AB=0.778;AC=39;AF=0.975;AN=40;BaseQRankSum=-3.568;DP=120;FS=6.982;HRun=0;HaplotypeScore=138.3639;InbreedingCoeff=-0.0739;MQ=75.94;MQ0=0;MQRankSum=-0.873;QD=148.98;ReadPosRankSum=0.034;VQSLOD=4.3180;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	1/1:7,0:7:8.25:1212,8,0	1/1:0,0:2:6.02:225,6,0	0/1:5,1:7:8.25:432,0,8	./.	./.	1/1:1,0:1:3.01:41,3,0	1/1:7,0:7:21.07:1341,21,0	./.	1/1:9,0:9:24.08:1410,24,0	1/1:2,0:2:6.02:153,6,0	1/1:8,0:8:21.96:1739,22,0	1/1:7,0:7:21.05:1112,21,0	1/1:6,0:6:18.06:736,18,0	1/1:6,0:6:18.06:791,18,0	./.	1/1:5,0:5:9.03:899,9,0	./.	1/1:6,0:6:18.05:801,18,0	1/1:10,0:10:10.40:1292,10,0	./.	1/1:3,0:3:2.91:398,3,0	1/1:3,0:3:9.03:308,9,0	1/1:7,0:6:9.03:503,9,0	./.	1/1:3,0:3:9.03:605,9,0	1/1:11,0:11:11.86:1843,12,0	1/1:6,0:6:16.61:1440,17,0
chr10	8970382	.	C	CA	6248.41	PASS	AB=1.000;AC=37;AF=0.661;AN=56;BaseQRankSum=-10.342;DP=346;FS=2.942;HRun=8;HaplotypeScore=51.2352;InbreedingCoeff=0.8827;MQ=82.02;MQ0=0;MQRankSum=-1.509;QD=27.41;ReadPosRankSum=-0.432;VQSLOD=5.2816;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:75.04:0,75,686	1/1:1,5:6:15.04:173,15,0	0/1:13,0:12:11.49:11,0,70	0/0:18,0:17:26.93:0,27,229	0/0:14,0:14:36.02:0,36,330	0/0:14,0:14:33.01:0,33,301	0/0:7,0:7:12:0,12,110	1/1:4,18:22:51.11:571,51,0	0/0:7,0:7:21.01:0,21,192	1/1:1,13:14:42.11:472,42,0	1/1:1,9:10:27.08:312,27,0	1/1:4,7:11:18.05:208,18,0	1/1:1,7:8:21.06:241,21,0	1/1:2,12:14:36.11:415,36,0	1/1:0,7:7:21.06:242,21,0	0/0:10,0:10:30.02:0,30,274	1/1:0,22:22:57.17:658,57,0	0/0:14,0:14:39.02:0,39,357	1/1:2,17:19:48.13:543,48,0	1/1:2,8:10:27.08:307,27,0	1/1:0,12:12:30.09:346,30,0	1/1:1,2:3:6.02:69,6,0	1/1:4,1:5:6.02:66,6,0	1/1:1,9:10:27.08:312,27,0	0/0:8,0:8:21.01:0,21,192	1/1:1,15:16:45.11:507,45,0	1/1:1,17:19:51.08:572,51,0	1/1:0,6:7:20.89:222,21,0
chr10	8972026	.	AGAAG	A	3531.70	PASS	AB=1.000;AC=28;AF=0.500;AN=56;BaseQRankSum=-3.806;DP=568;FS=1.167;HRun=0;HaplotypeScore=169.6769;InbreedingCoeff=0.2793;MQ=48.83;MQ0=16;MQRankSum=2.025;QD=9.47;ReadPosRankSum=4.392;VQSLOD=3.1133;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:15,3:18:39.13:556,39,0	0/1:10,0:10:3.60:4,0,39	0/0:24,0:13:2.96:0,3,19	0/0:15,0:5:2.99:0,3,24	1/1:27,10:36:65.66:908,66,0	1/1:11,4:15:24.08:347,24,0	1/1:16,2:17:18.04:241,18,0	1/1:16,0:13:0.47:1,0,0	0/0:19,0:19:8.80:0,9,108	0/1:31,0:30:37.51:38,0,68	0/0:18,0:18:15.44:0,15,193	0/1:22,0:21:0.25:0,0,40	0/0:21,0:19:10.26:0,10,118	0/1:23,0:21:2.91:3,0,43	0/1:25,0:23:8.66:9,0,36	1/1:16,4:20:35.95:410,36,0	0/0:28,0:24:7.03:0,7,94	1/1:10,1:10:14.64:196,15,0	1/1:10,0:6:0.47:1,0,0	0/0:22,0:22:2.69:0,3,49	1/1:13,0:11:1.92:7,2,0	0/1:24,0:24:12.03:12,0,95	0/0:17,0:17:8.12:0,8,69	0/1:35,0:33:13.10:14,0,13	1/1:22,5:25:54.12:761,54,0	0/1:18,0:16:23.49:23,0,47	0/0:22,0:22:1.14:0,1,61	0/0:9,0:9:1.53:0,2,23
chr10	8972072	.	A	AG	4292.17	PASS	AB=0.810;AC=23;AF=0.411;AN=56;BaseQRankSum=-4.154;DP=438;FS=3.802;HRun=2;HaplotypeScore=172.0724;InbreedingCoeff=-0.6701;MQ=31.99;MQ0=19;MQRankSum=-1.408;QD=11.24;ReadPosRankSum=0.925;VQSLOD=3.4003;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:13,0:12:4.20:4,0,93	0/1:11,4:14:99:147,0,339	0/0:8,0:4:9.03:0,9,114	0/0:7,0:3:9.03:0,9,126	0/1:19,0:18:29.89:66,0,30	0/1:7,0:7:2.91:13,0,3	0/0:13,0:8:6.49:0,6,84	0/0:13,0:6:18.06:0,18,237	0/1:10,12:22:99:503,0,274	0/1:16,7:20:99:267,0,391	0/1:14,9:22:99:373,0,266	0/1:15,4:18:99:154,0,274	0/1:8,11:17:99:458,0,150	0/1:11,5:14:99:156,0,199	0/1:14,5:18:99:139,0,325	0/1:10,0:10:24.11:24,0,69	0/1:15,5:17:99:148,0,278	0/1:6,0:6:14.30:14,0,35	0/0:14,1:7:17.98:0,18,197	0/1:9,10:19:99:411,0,232	0/1:6,7:12:99:170,0,103	0/1:14,7:21:99:303,0,285	0/1:14,3:14:99:134,0,280	0/1:15,3:13:65.63:66,0,217	0/1:18,0:16:22.33:22,0,106	0/1:16,8:21:99:340,0,265	0/1:10,7:15:99:296,0,119	0/1:2,2:4:71.56:83,0,72
chr10	8972076	.	A	AG	1564.59	PASS	AB=0.783;AC=9;AF=0.161;AN=56;BaseQRankSum=-1.553;DP=434;FS=10.426;HRun=2;HaplotypeScore=181.9996;InbreedingCoeff=0.2735;MQ=31.33;MQ0=17;MQRankSum=2.632;QD=20.86;ReadPosRankSum=-1.326;VQSLOD=1.8088;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:6,4:11:58.27:202,0,58	0/0:14,0:14:19.42:0,19,392	0/0:10,0:4:12.04:0,12,162	0/0:8,0:4:12.03:0,12,155	1/1:10,4:16:29.63:476,30,0	1/1:2,2:7:6.59:205,7,0	0/1:10,1:8:38.79:39,0,75	0/0:15,0:8:23.99:0,24,268	0/0:23,0:23:43.03:0,43,501	0/0:26,0:22:24.78:0,25,432	0/0:24,0:23:29.83:0,30,447	0/0:18,0:17:19.04:0,19,312	0/0:18,0:16:25.30:0,25,269	0/0:16,0:13:1.35:0,1,209	0/0:19,0:18:23.94:0,24,386	0/1:6,2:8:13.36:257,0,13	0/0:20,0:17:38.16:0,38,414	0/1:2,2:5:25.86:122,0,26	0/0:14,0:7:14.39:0,14,172	0/0:18,0:18:7.54:0,8,294	0/0:13,0:12:1.96:0,2,155	0/0:21,0:21:34.32:0,34,420	0/0:15,0:13:17.26:0,17,320	0/0:17,0:13:18.56:0,19,209	0/1:4,5:11:3.79:408,0,4	0/0:25,0:22:41.94:0,42,440	0/0:18,0:15:28.90:0,29,274	0/0:4,0:4:6.37:0,6,105
chr10	8972080	.	A	AG	1041.77	PASS	AB=0.870;AC=9;AF=0.161;AN=56;BaseQRankSum=-0.053;DP=434;FS=2.744;HRun=2;HaplotypeScore=194.2417;InbreedingCoeff=0.2584;MQ=30.07;MQ0=17;MQRankSum=1.203;QD=14.27;ReadPosRankSum=-1.120;VQSLOD=3.0294;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:10,1:10:56.13:133,0,56	0/0:14,0:14:38.44:0,38,389	0/0:14,0:5:15.05:0,15,199	0/0:11,0:4:12.04:0,12,168	1/1:8,6:13:29.20:326,29,0	1/1:5,1:6:3.50:114,4,0	0/1:13,0:8:4.82:5,0,69	0/0:14,0:7:21.04:0,21,235	0/0:21,0:21:56.84:0,57,620	0/0:26,0:22:56.46:0,56,524	0/0:23,0:21:45.39:0,45,476	0/0:21,0:19:24.75:0,25,283	0/0:18,0:15:41.53:0,42,379	0/0:16,0:13:31.17:0,31,301	0/0:19,0:18:7.33:0,7,319	0/1:3,5:8:16.54:218,0,17	0/0:21,0:18:50.38:0,50,475	0/1:7,1:8:99:119,0,105	0/0:11,0:6:14.82:0,15,126	0/0:15,0:15:29.75:0,30,321	0/0:11,0:10:15.71:0,16,141	0/0:20,0:20:46.18:0,46,417	0/0:17,0:14:6.72:0,7,260	0/0:20,0:16:25.22:0,25,283	0/1:12,1:11:8.42:266,0,8	0/0:28,0:24:23.93:0,24,463	0/0:17,0:14:35.56:0,36,312	0/0:4,0:4:0.71:0,1,53
chr10	8972093	.	AG	A	516.84	PASS	AB=0.887;AC=11;AF=0.196;AN=56;BaseQRankSum=6.994;DP=472;FS=0.000;HRun=2;HaplotypeScore=184.5339;InbreedingCoeff=0.1662;MQ=28.14;MQ0=19;MQRankSum=-0.416;QD=4.24;ReadPosRankSum=-0.684;VQSLOD=-0.1589;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:8,3:10:42.61:43,0,64	0/0:15,0:15:27.16:0,27,504	0/0:20,0:5:15.05:0,15,224	0/0:14,0:4:12.04:0,12,169	0/1:6,7:12:11.81:59,0,12	0/1:9,1:9:26.34:26,0,102	0/0:16,1:10:11.96:0,12,107	0/0:17,0:12:31.65:0,32,416	0/1:15,0:15:82.70:83,0,231	0/0:32,0:28:71.90:0,72,870	0/0:18,0:16:42.61:0,43,578	0/0:24,0:21:38.02:0,38,475	0/0:16,0:13:23.65:0,24,232	0/0:15,0:12:23.05:0,23,241	0/0:24,0:23:38.48:0,38,580	1/1:3,6:9:12.90:163,13,0	0/1:20,0:17:73.14:73,0,214	1/1:7,2:9:6.55:127,7,0	0/0:13,0:10:27.08:0,27,362	0/0:17,0:16:31.10:0,31,363	0/0:9,0:7:11.82:0,12,187	0/0:26,0:26:47.30:0,47,479	0/0:20,0:17:41.86:0,42,488	0/1:22,0:15:38.15:46,0,38	0/1:11,2:11:47.47:51,0,47	0/0:27,0:21:45.12:0,45,541	0/0:17,0:14:34.13:0,34,424	0/0:9,0:9:18.47:0,18,196
chr10	8972095	.	GAAAGA	G	1583.10	PASS	AB=0.927;AC=23;AF=0.411;AN=56;BaseQRankSum=9.931;DP=471;FS=7.489;HRun=0;HaplotypeScore=200.6228;InbreedingCoeff=-0.3886;MQ=27.92;MQ0=18;MQRankSum=-3.373;QD=4.62;ReadPosRankSum=1.920;VQSLOD=1.7095;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:8,0:8:26.70:121,0,27	0/1:14,1:16:68.19:68,0,422	0/0:20,0:5:15.05:0,15,475	0/0:14,0:4:12.04:0,12,336	0/1:12,0:11:39.96:58,0,40	0/1:10,0:9:35.31:35,0,157	0/1:15,0:10:13.58:14,0,50	0/0:17,0:12:22.05:0,22,374	0/1:14,0:15:99:185,0,137	0/0:30,0:28:53.42:0,53,1124	0/0:18,0:16:32.58:0,33,518	0/1:24,3:23:68.48:68,0,340	0/1:13,2:12:47.68:48,0,113	0/1:11,3:11:72:72,0,249	0/1:25,0:24:15.36:15,0,505	1/1:10,0:10:22.57:214,23,0	0/1:18,0:16:99:210,0,188	1/1:9,0:10:17.44:220,17,0	0/1:13,1:11:5.82:6,0,369	0/1:16,1:16:24.62:25,0,220	0/1:9,1:8:5.48:5,0,255	0/1:23,4:27:99:125,0,198	0/0:20,0:17:25.90:0,26,366	0/1:19,0:13:51.95:133,0,52	0/1:11,0:8:32.24:32,0,61	0/1:25,3:23:71.38:71,0,344	0/1:14,3:14:23.71:24,0,330	0/0:8,1:9:8.21:0,8,197
chr10	8972100	.	AG	A	1470.73	PASS	AB=0.834;AC=17;AF=0.304;AN=56;BaseQRankSum=6.490;DP=474;FS=2.361;HRun=1;HaplotypeScore=171.4851;InbreedingCoeff=-0.1129;MQ=27.35;MQ0=25;MQRankSum=-1.952;QD=6.90;ReadPosRankSum=-1.942;VQSLOD=0.0773;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:7,4:10:25.20:107,0,25	0/0:15,1:16:39.38:0,39,521	0/0:20,0:5:15.05:0,15,240	0/0:14,0:4:12.04:0,12,189	0/1:7,3:9:39.82:42,0,40	0/1:6,5:10:99:154,0,144	0/1:12,5:9:50.47:72,0,50	0/1:15,2:12:50.76:51,0,367	0/1:12,3:14:96.37:96,0,176	0/0:29,1:28:41.17:0,41,938	0/0:20,0:18:33.42:0,33,544	0/0:26,2:22:1.67:0,2,446	0/1:13,1:10:24.33:24,0,186	0/1:15,0:12:3.27:3,0,209	0/1:20,4:23:35.50:36,0,587	1/1:5,5:10:26.51:270,27,0	0/1:14,5:14:99:249,0,180	1/1:3,7:10:17.73:287,18,0	0/0:15,0:11:29.59:0,30,424	0/0:21,0:19:31.31:0,31,440	0/1:12,1:10:20.85:21,0,230	0/0:25,0:25:34.39:0,34,440	0/0:18,1:17:27.62:0,28,459	0/1:15,6:14:36.99:196,0,37	0/1:5,1:4:32.11:32,0,72	0/0:27,1:23:13.09:0,13,554	0/0:17,0:14:34.42:0,34,442	0/0:8,0:8:12.07:0,12,161
chr10	8972137	.	AAGGAAGGG	A	5880.11	PASS	AB=0.980;AC=30;AF=0.556;AN=54;BaseQRankSum=-0.172;DP=787;FS=31.019;HRun=0;HaplotypeScore=333.5077;InbreedingCoeff=-0.6434;MQ=29.67;MQ0=79;MQRankSum=1.610;QD=7.57;ReadPosRankSum=-4.398;VQSLOD=1.3953;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:21,0:19:31.92:146,0,32	1/1:14,2:16:31.78:359,32,0	0/0:5,0:2:5.92:0,6,39	./.	0/1:19,0:15:76.92:77,0,180	0/1:20,0:18:66.84:83,0,67	0/1:29,0:19:33.40:80,0,33	0/1:27,0:14:14.67:113,0,15	0/1:22,0:16:59.58:86,0,60	0/1:61,0:54:31.05:495,0,31	1/1:34,0:31:22.06:222,22,0	0/1:44,2:37:99:352,0,178	0/1:26,0:23:2.49:201,0,2	0/1:39,1:31:99:347,0,120	1/1:33,0:31:21.32:257,21,0	0/1:13,0:13:67.03:82,0,67	0/1:25,0:20:88.09:88,0,92	0/1:17,0:15:51.12:98,0,51	0/1:29,0:21:79.43:104,0,79	1/1:44,1:38:12.50:318,13,0	0/1:26,0:18:26.35:139,0,26	0/1:37,4:37:70.81:670,0,71	0/1:26,0:25:10.47:208,0,10	0/1:39,0:31:52.84:148,0,53	0/1:26,0:21:99:122,0,113	0/1:50,1:39:75.09:492,0,75	0/1:33,1:28:24.37:240,0,24	0/1:7,3:9:74.98:355,0,75
chr10	8972141	.	AAGGG	A	6473.67	PASS	AB=0.995;AC=35;AF=0.648;AN=54;BaseQRankSum=-0.180;DP=798;FS=22.844;HRun=0;HaplotypeScore=283.7462;InbreedingCoeff=-0.3856;MQ=29.99;MQ0=77;MQRankSum=1.925;QD=8.22;ReadPosRankSum=-0.314;VQSLOD=2.3090;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:19:33.60:207,34,0	1/1:15,0:15:32.61:235,33,0	0/0:6,0:2:5.92:0,6,39	./.	0/1:19,0:15:18.34:107,0,18	0/1:20,0:18:7.67:133,0,8	0/1:29,0:20:3.27:148,0,3	0/1:27,0:14:19.97:138,0,20	0/1:24,0:18:26.99:92,0,27	0/1:59,6:57:6.14:963,0,6	1/1:33,2:32:20.42:300,20,0	0/1:46,0:38:29.47:264,0,29	1/1:28,0:24:7.12:225,7,0	0/1:41,0:31:62.25:259,0,62	1/1:30,2:29:54.09:409,54,0	0/1:14,0:14:36.31:108,0,36	0/1:24,0:20:59.86:86,0,60	1/1:16,0:14:18.44:180,18,0	0/1:26,0:19:76.46:121,0,76	1/1:47,0:40:14.68:355,15,0	0/1:25,0:18:39.58:116,0,40	1/1:45,0:41:5.96:475,6,0	1/1:26,1:26:8.49:336,8,0	0/1:38,0:31:10.83:168,0,11	0/1:27,0:22:63.52:197,0,64	0/1:51,0:38:14.19:458,0,14	0/1:34,0:28:9.04:214,0,9	0/1:10,0:9:15.27:178,0,15
chr10	8972149	.	A	AG	2515.70	PASS	AB=0.682;AC=7;AF=0.130;AN=54;BaseQRankSum=0.846;DP=793;FS=11.130;HRun=2;HaplotypeScore=258.3879;InbreedingCoeff=-0.1557;MQ=30.14;MQ0=83;MQRankSum=1.139;QD=17.23;ReadPosRankSum=4.777;VQSLOD=1.7398;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:10,8:15:99:307,0,203	0/0:16,0:16:41.32:0,41,464	0/0:8,0:2:6.02:0,6,84	./.	0/1:10,10:18:30.87:454,0,31	0/1:14,7:19:99:304,0,308	0/1:21,9:21:99:300,0,209	0/0:36,0:20:30.03:0,30,535	0/0:25,0:19:40.07:0,40,416	0/0:66,0:57:99:0,153,1764	0/0:26,0:23:53.77:0,54,636	0/0:41,0:33:58.78:0,59,554	0/0:30,0:24:44.74:0,45,503	0/0:39,0:29:63.63:0,64,714	0/0:33,0:28:63.07:0,63,740	0/1:4,11:15:72.30:462,0,72	0/0:22,1:17:31.84:0,32,454	0/1:6,10:14:90.51:379,0,91	0/0:29,0:20:24.36:0,24,527	0/0:45,0:37:57.75:0,58,788	0/0:24,0:17:34.75:0,35,380	0/0:47,0:43:70.75:0,71,844	0/0:25,0:24:40.28:0,40,513	0/0:35,0:29:51.05:0,51,570	0/1:15,11:22:99:439,0,201	0/0:48,0:35:96.30:0,96,943	0/0:32,0:26:62.68:0,63,647	0/0:11,0:10:10.59:0,11,187
chr10	8972180	.	GA	G	1860.07	PASS	AB=0.848;AC=16;AF=0.286;AN=56;BaseQRankSum=3.911;DP=694;FS=96.993;HRun=3;HaplotypeScore=235.1979;InbreedingCoeff=-0.4221;MQ=33.47;MQ0=55;MQRankSum=-6.390;QD=4.63;ReadPosRankSum=-0.956;VQSLOD=-0.3701;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:12:6.99:0,7,283	0/1:9,1:10:37.59:38,0,250	0/0:19,0:3:3.01:0,3,43	0/0:18,0:4:9.03:0,9,125	0/0:26,0:25:68.50:0,68,774	0/0:22,0:21:57.05:0,57,622	0/0:21,0:19:36:0,36,435	0/0:43,1:30:45.05:0,45,1059	0/0:25,0:22:53.78:0,54,517	0/1:44,11:53:99:230,0,1128	0/1:15,4:19:43.43:43,0,204	0/1:25,7:28:89.25:89,0,404	0/1:15,1:12:24.15:24,0,202	0/1:21,8:27:99:230,0,308	0/1:20,4:20:70.01:70,0,281	0/0:26,0:26:74.92:0,75,778	0/1:17,3:15:63.99:64,0,319	0/0:16,0:14:32.92:0,33,368	0/0:29,0:15:16.61:0,17,451	0/1:28,4:27:99:112,0,519	0/1:11,1:7:21.96:22,0,141	0/1:25,6:28:99:139,0,373	0/1:19,4:22:99:150,0,248	0/1:23,3:23:99:112,0,338	0/0:31,1:28:83.87:0,84,874	0/1:25,12:30:99:437,0,372	0/1:18,7:20:99:157,0,238	0/1:8,3:9:99:100,0,145
chr10	8972195	.	GGAA	G	9879.04	PASS	AB=0.866;AC=26;AF=0.464;AN=56;BaseQRankSum=0.099;DP=665;FS=12.130;HRun=0;HaplotypeScore=208.6044;InbreedingCoeff=-0.8485;MQ=42.99;MQ0=22;MQRankSum=-4.649;QD=15.68;ReadPosRankSum=-0.184;VQSLOD=3.1214;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:15,0:15:99:153,0,213	0/1:7,2:9:87.40:171,0,87	0/0:19,0:7:17.83:0,18,277	0/0:16,0:6:14.21:0,14,175	0/1:26,0:25:99:329,0,340	0/1:21,0:21:99:418,0,224	0/1:22,0:20:99:208,0,148	0/1:31,0:26:73.13:73,0,724	0/1:25,0:25:99:550,0,109	0/1:19,27:45:99:979,0,469	0/1:8,13:21:99:275,0,137	0/1:15,10:23:99:484,0,124	0/1:13,4:15:99:396,0,126	0/1:14,8:21:99:499,0,151	0/1:11,15:24:99:257,0,175	0/1:28,0:28:99:532,0,166	0/1:14,3:16:99:242,0,203	0/1:22,0:20:99:340,0,110	0/1:19,8:18:99:261,0,344	0/1:30,7:35:99:766,0,478	0/1:7,5:9:45.79:124,0,46	0/1:16,7:21:91.72:509,0,92	0/1:21,5:25:99:538,0,119	0/1:21,3:22:99:335,0,140	0/1:31,0:30:99:445,0,384	0/1:34,3:30:99:546,0,162	0/1:23,1:19:99:243,0,134	0/1:15,0:14:4.38:207,0,4
chr10	8972198	.	A	AG	10923.57	PASS	AB=0.732;AC=27;AF=0.482;AN=56;BaseQRankSum=-0.405;DP=659;FS=14.014;HRun=1;HaplotypeScore=179.4794;InbreedingCoeff=-0.8268;MQ=44.77;MQ0=15;MQRankSum=-5.788;QD=17.48;ReadPosRankSum=3.079;VQSLOD=3.5133;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:7,8:15:99:249,0,140	0/1:5,1:6:59.71:113,0,60	0/0:18,0:7:18.06:0,18,232	0/0:14,0:7:14.62:0,15,159	0/1:13,15:27:99:485,0,256	0/1:6,14:20:99:476,0,140	0/1:7,10:17:99:315,0,119	0/1:24,6:25:99:254,0,511	0/1:4,22:26:64.32:661,0,64	0/1:43,1:43:99:764,0,343	0/1:22,0:22:99:214,0,123	0/1:16,9:23:68.81:362,0,69	0/1:10,6:15:61.47:310,0,61	0/1:13,8:21:99:374,0,105	0/1:21,4:23:99:212,0,118	0/1:7,20:27:99:836,0,116	0/1:14,6:18:99:220,0,116	0/1:9,13:20:99:434,0,110	0/1:25,1:18:99:240,0,263	0/1:21,16:37:99:556,0,280	0/1:12,0:9:45.81:81,0,46	0/1:14,8:21:69.28:356,0,69	0/1:12,13:24:95.40:460,0,95	0/1:13,13:24:99:360,0,107	0/1:13,21:33:99:706,0,269	0/1:11,27:33:99:955,0,101	0/1:11,12:18:82.67:453,0,83	1/1:4,12:15:0.66:479,1,0
chr10	8972805	.	G	GACAGACACACAC	1305.38	PASS	AB=0.776;AC=8;AF=0.160;AN=50;BaseQRankSum=3.687;DP=541;FS=2.767;HRun=0;HaplotypeScore=154.1666;InbreedingCoeff=0.7220;MQ=55.17;MQ0=19;MQRankSum=-6.611;QD=11.45;ReadPosRankSum=0.565;VQSLOD=2.4112;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:7,0:7:15.05:0,15,524	0/0:21,0:13:33.10:0,33,930	0/0:22,0:18:35.15:0,35,812	./.	0/1:4,10:20:0:0,0,0	0/1:21,0:16:81.74:218,0,82	0/0:22,0:19:50.93:0,51,1084	1/1:30,0:30:34.31:749,34,0	0/0:21,0:21:53.99:0,54,1280	0/0:15,0:15:39.09:0,39,1171	0/0:18,0:18:42.10:0,42,1195	0/0:26,0:26:61.38:0,61,1935	0/0:12,0:12:36.11:0,36,1254	0/0:28,0:28:69.22:0,69,2264	1/1:2,18:29:4.87:119,5,0	0/0:26,0:26:49.41:0,49,1352	1/1:3,5:10:6.93:349,7,0	0/0:18,0:15:35.81:0,36,747	0/0:20,0:20:47.92:0,48,1537	0/0:8,0:8:21.07:0,21,715	0/0:19,0:18:42.11:0,42,1199	0/0:22,0:22:21.20:0,21,1306	0/0:16,0:15:26.82:0,27,513	./.	0/0:28,0:25:72.18:0,72,1995	0/0:23,0:23:63.19:0,63,1897	0/0:12,0:11:30.05:0,30,879
chr10	8972807	.	C	CAG	525.81	PASS	AB=1.000;AC=6;AF=0.115;AN=52;BaseQRankSum=6.419;DP=527;FS=2.674;HRun=0;HaplotypeScore=81.4346;InbreedingCoeff=0.4655;MQ=54.37;MQ0=19;MQRankSum=-4.465;QD=5.01;ReadPosRankSum=1.151;VQSLOD=2.6430;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:2.22:0,2,7	0/0:7,0:7:17.23:0,17,200	0/0:21,0:13:33.08:0,33,448	0/0:18,0:14:32.48:0,32,406	./.	0/1:16,0:15:0:0,0,0	0/1:22,0:17:29.19:41,0,29	0/0:22,0:19:50.73:0,51,522	1/1:30,0:30:47.96:479,48,0	0/0:21,0:21:54.94:0,55,661	0/0:16,0:16:39.09:0,39,536	0/0:19,0:19:40.33:0,40,517	0/0:26,0:26:59:0,59,854	0/0:13,0:13:36.10:0,36,507	0/0:28,0:28:63.18:0,63,955	0/1:26,0:24:19.49:29,0,19	0/0:25,0:25:47.98:0,48,560	0/1:11,0:10:1.26:97,0,1	0/0:19,0:16:38.71:0,39,401	0/0:20,0:20:48.11:0,48,680	0/0:9,0:9:21.54:0,22,311	0/0:19,0:18:39.99:0,40,525	0/0:24,0:24:41.43:0,41,553	0/0:16,0:15:23.28:0,23,274	./.	0/0:30,0:27:72.32:0,72,930	0/0:25,0:25:55.13:0,55,798	0/0:12,0:11:30.03:0,30,387
chr10	8972813	.	CAGAG	C	311.19	PASS	AB=0.983;AC=6;AF=0.125;AN=48;BaseQRankSum=3.555;DP=538;FS=0.000;HRun=0;HaplotypeScore=95.2607;InbreedingCoeff=0.3321;MQ=50.54;MQ0=19;MQRankSum=-1.436;QD=2.73;ReadPosRankSum=2.004;VQSLOD=1.4218;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:3.01:0,3,51	0/0:8,0:8:15.04:0,15,255	./.	./.	./.	0/0:19,0:18:5.86:0,6,97	0/0:24,0:19:2.88:0,3,49	0/0:28,0:25:13.85:0,14,95	1/1:20,0:28:7.92:153,8,0	0/0:21,0:21:26.10:0,26,316	0/0:19,0:19:12.04:0,12,240	0/0:15,0:18:9.03:0,9,151	0/0:27,0:27:26.82:0,27,457	0/0:12,0:12:11.77:0,12,156	0/1:26,1:28:13.56:14,0,560	0/0:25,0:24:8.63:0,9,128	1/1:16,7:25:13.21:210,13,0	0/0:12,0:11:9.28:0,9,96	0/0:18,0:15:8.98:0,9,87	0/0:20,0:20:5.61:0,6,79	0/0:10,0:10:6.44:0,6,71	0/0:16,0:15:6.02:0,6,94	0/0:26,0:26:14.70:0,15,224	0/0:17,0:17:8.86:0,9,120	./.	0/1:33,0:30:54.77:55,0,239	0/0:20,0:25:26.54:0,27,436	0/0:13,0:12:9.50:0,10,142
chr10	8973498	.	A	ATATGTATGTATGTATG	23738.86	PASS	AB=0.800;AC=51;AF=0.911;AN=56;BaseQRankSum=-3.173;DP=797;FS=1.467;HRun=0;HaplotypeScore=300.1739;InbreedingCoeff=0.4640;MQ=51.34;MQ0=7;MQRankSum=0.021;QD=31.86;ReadPosRankSum=3.423;VQSLOD=3.5039;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:24:6.02:143,6,0	1/1:8,8:17:3.01:227,3,0	0/0:22,0:9:15.73:0,16,230	0/0:30,0:13:1.86:0,2,108	1/1:18,0:35:2.98:209,3,0	1/1:19,0:40:15.05:687,15,0	1/1:32,0:32:18.04:321,18,0	1/1:51,0:47:66.20:2304,66,0	1/1:15,4:21:6.02:369,6,0	1/1:15,17:33:54.18:2743,54,0	1/1:18,15:33:6.49:454,6,0	1/1:15,11:27:18.06:1106,18,0	1/1:17,17:34:18.06:1348,18,0	1/1:17,15:33:12.04:907,12,0	1/1:16,11:28:12.04:821,12,0	1/1:27,0:48:18.06:1162,18,0	1/1:10,3:13:6.02:454,6,0	1/1:8,0:8:9.03:133,9,0	1/1:29,2:32:42.95:1501,43,0	1/1:20,20:40:15.05:1134,15,0	1/1:17,0:17:6.02:108,6,0	1/1:14,0:24:9.50:626,10,0	1/1:16,11:28:12.09:907,12,0	0/1:15,4:20:0:1,0,0	1/1:16,0:26:3.01:209,3,0	1/1:18,17:37:66.23:3369,66,0	1/1:13,15:29:18.06:1267,18,0	1/1:7,5:11:18.06:1232,18,0
chr10	8973528	.	A	ATG	1369.40	PASS	AB=0.944;AC=21;AF=0.375;AN=56;BaseQRankSum=7.725;DP=592;FS=0.000;HRun=0;HaplotypeScore=203.8596;InbreedingCoeff=-0.6324;MQ=60.60;MQ0=5;MQRankSum=-10.433;QD=3.16;ReadPosRankSum=2.728;VQSLOD=2.5495;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:10,8:18:50.18:50,0,81	0/1:7,0:7:32.77:33,0,35	0/0:36,0:25:70.93:0,71,1013	0/0:24,0:12:27.03:0,27,377	0/0:16,1:16:6.58:0,7,343	0/0:22,0:22:3.59:0,4,299	0/1:19,15:34:26.46:26,0,297	0/1:37,17:49:99:562,0,1233	0/0:21,0:21:6.66:0,7,321	0/1:29,0:29:57.46:57,0,734	0/1:16,0:16:24.41:24,0,165	0/1:19,0:19:51.55:52,0,361	0/1:18,1:18:52.98:53,0,366	0/1:19,0:19:45.84:46,0,283	0/1:22,0:22:28.39:28,0,330	0/1:27,0:27:51.91:52,0,222	0/1:8,0:8:9.23:9,0,91	0/1:9,0:9:13.48:13,0,174	0/1:28,0:28:99:153,0,775	0/1:17,0:17:84.35:84,0,148	0/1:16,5:21:23.07:23,0,399	0/1:16,0:16:33.85:34,0,222	0/1:12,0:12:65.57:66,0,93	0/0:21,0:21:18.06:0,18,270	0/0:17,0:16:6.62:0,7,344	0/1:27,0:27:80.86:81,0,722	0/1:21,0:21:36.64:37,0,455	0/1:10,1:11:40.84:41,0,321
chr10	8974133	.	CAAAA	C	11637.23	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-11.015;DP=629;FS=0.806;HRun=13;HaplotypeScore=148.0374;InbreedingCoeff=0.9449;MQ=66.09;MQ0=4;MQRankSum=-3.232;QD=29.76;ReadPosRankSum=1.613;VQSLOD=2.7799;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:23:9.25:0,9,114	1/1:0,8:9:21.90:310,22,0	0/0:29,0:21:34.33:0,34,659	0/0:18,0:14:1.78:0,2,279	0/0:12,0:34:64.78:0,65,451	0/0:4,0:30:58.49:0,58,341	0/0:2,0:17:32.17:0,32,188	1/1:2,24:26:69.14:939,69,0	0/0:7,0:18:29.39:0,29,187	1/1:7,23:30:68.37:952,68,0	1/1:4,22:27:50.65:717,51,0	1/1:3,16:19:36.07:526,36,0	1/1:5,17:22:29.60:438,30,0	1/1:2,21:23:42.01:614,42,0	1/1:4,13:18:35.77:506,36,0	0/0:10,0:30:41.81:0,42,254	1/1:10,15:25:57.11:822,57,0	0/0:5,0:9:17.80:0,18,183	1/1:1,16:17:48.13:653,48,0	1/1:7,25:32:60.03:861,60,0	1/1:3,5:8:12.02:176,12,0	1/1:4,18:22:43.42:684,43,0	1/1:5,25:30:59.65:877,60,0	1/1:6,16:23:40.68:612,41,0	0/0:6,0:28:52.73:0,53,328	1/1:2,22:24:65.89:937,66,0	1/1:2,27:30:61.89:881,62,0	1/1:3,3:6:8.99:132,9,0
chr10	8976129	.	G	GCT	17014.31	PASS	AB=0.645;AC=48;AF=0.857;AN=56;BaseQRankSum=-3.106;DP=580;FS=0.000;HRun=0;HaplotypeScore=161.4629;InbreedingCoeff=0.4565;MQ=65.60;MQ0=5;MQRankSum=-3.929;QD=31.86;ReadPosRankSum=4.503;VQSLOD=6.5026;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,15:21:36.69:672,37,0	1/1:3,7:10:24.05:370,24,0	0/0:24,0:23:25.30:0,25,265	0/0:20,0:20:28.07:0,28,301	1/1:11,10:19:33.08:489,33,0	0/1:6,9:15:7.73:417,0,8	1/1:5,9:14:27.09:447,27,0	1/1:8,18:27:54.16:863,54,0	0/1:7,8:15:7.57:413,0,8	1/1:13,18:31:34.28:987,34,0	1/1:6,14:20:39.13:634,39,0	1/1:7,12:18:45.11:696,45,0	1/1:10,17:27:54.61:863,55,0	1/1:8,18:26:57.19:910,57,0	1/1:8,13:21:42.14:689,42,0	1/1:8,18:26:51.42:951,51,0	1/1:1,6:7:18.06:295,18,0	1/1:2,6:8:12.04:197,12,0	1/1:10,9:20:45.15:720,45,0	1/1:15,23:37:28.57:1006,29,0	1/1:2,11:13:24.08:399,24,0	0/1:7,14:21:30.28:593,0,30	1/1:5,14:18:39.12:618,39,0	1/1:2,23:23:54.18:894,54,0	1/1:8,19:25:57.19:944,57,0	1/1:9,12:20:42.10:662,42,0	1/1:9,15:23:54.17:844,54,0	0/1:10,7:17:4.72:441,0,5
chr10	8976152	.	CTCTCTG	C	8608.70	PASS	AB=0.846;AC=51;AF=0.911;AN=56;BaseQRankSum=3.718;DP=518;FS=0.000;HRun=0;HaplotypeScore=223.4708;InbreedingCoeff=0.5664;MQ=54.28;MQ0=4;MQRankSum=-2.846;QD=18.92;ReadPosRankSum=3.943;VQSLOD=3.7606;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,5:14:18.04:295,18,0	1/1:4,4:8:12.04:226,12,0	0/0:30,0:19:19.86:0,20,467	0/0:33,0:17:8.82:0,9,257	1/1:6,7:13:8.98:72,9,0	1/1:5,7:12:15.03:244,15,0	1/1:6,4:10:11.78:125,12,0	0/1:18,4:22:15.10:337,0,15	1/1:3,13:16:36.11:654,36,0	1/1:11,12:23:45.08:767,45,0	1/1:5,10:15:11.93:184,12,0	1/1:5,20:25:39.03:801,39,0	1/1:12,11:23:35.97:547,36,0	1/1:11,9:20:24.05:389,24,0	1/1:9,11:20:14.74:259,15,0	1/1:11,11:22:27.06:468,27,0	1/1:3,3:6:12.04:252,12,0	1/1:6,0:6:5.94:42,6,0	1/1:16,2:17:14.95:222,15,0	1/1:12,18:31:24.05:378,24,0	1/1:12,1:13:3.01:62,3,0	1/1:10,15:25:8.96:126,9,0	1/1:7,10:17:21.05:319,21,0	1/1:18,4:22:9:103,9,0	1/1:10,16:26:24.07:406,24,0	1/1:8,7:15:30.09:560,30,0	1/1:5,16:21:26.67:520,27,0	1/1:9,3:12:18.01:253,18,0
chr10	8976172	.	CTCTG	C	2851.22	PASS	AB=0.962;AC=29;AF=0.518;AN=56;BaseQRankSum=6.282;DP=554;FS=0.000;HRun=0;HaplotypeScore=234.8799;InbreedingCoeff=-0.6919;MQ=38.78;MQ0=15;MQRankSum=-5.876;QD=5.88;ReadPosRankSum=8.682;VQSLOD=1.2019;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:20,1:21:76.42:76,0,96	0/1:5,0:5:26.90:62,0,27	0/0:28,0:10:18.06:0,18,420	0/0:39,0:7:11.51:0,12,273	1/1:12,0:12:8.78:72,9,0	0/1:13,2:15:77.15:77,0,91	0/1:15,1:16:44.02:44,0,72	0/1:17,0:17:99:188,0,154	1/1:17,1:18:0.43:213,0,0	0/1:27,0:27:99:282,0,231	0/1:19,0:19:52.15:52,0,94	0/1:29,0:29:99:254,0,102	0/1:23,2:26:99:205,0,174	0/1:19,1:20:99:117,0,121	0/1:18,1:19:21.28:96,0,21	0/1:20,2:22:99:161,0,149	0/1:12,0:12:69.05:69,0,193	0/1:5,0:5:29.75:30,0,63	0/1:14,0:13:74.38:74,0,196	0/1:27,0:27:14.31:128,0,14	0/1:16,0:16:13.12:13,0,102	0/1:21,0:21:18.28:18,0,45	0/1:19,1:20:71.24:79,0,71	1/1:16,2:18:8.80:65,9,0	0/1:24,1:25:99:132,0,117	0/1:22,2:24:99:215,0,280	0/1:26,0:26:99:170,0,184	0/1:8,3:11:86.88:115,0,87
chr10	8976202	.	CTG	C	434.75	PASS	AB=0.973;AC=13;AF=0.232;AN=56;BaseQRankSum=1.627;DP=624;FS=5.181;HRun=0;HaplotypeScore=240.3213;InbreedingCoeff=-0.2469;MQ=36.64;MQ0=26;MQRankSum=-4.897;QD=1.57;ReadPosRankSum=-0.098;VQSLOD=1.7610;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:23:16.77:0,17,162	0/1:6,1:7:35.95:36,0,49	1/1:23,0:1:1.25:3,1,0	0/0:47,0:2:3.01:0,3,45	0/0:17,0:17:5.81:0,6,94	0/1:17,0:17:3.28:3,0,219	0/0:21,0:21:1.15:0,1,123	0/1:19,0:18:99:162,0,178	0/1:21,0:21:20.36:20,0,160	0/1:28,0:28:87.99:88,0,528	0/0:16,2:17:9.23:0,9,143	0/1:37,1:37:63.84:64,0,499	0/1:28,0:28:61.33:61,0,350	0/1:18,2:20:4.64:5,0,279	0/0:21,0:21:2.04:0,2,147	0/1:30,0:30:12.74:13,0,427	0/0:13,0:13:30.19:0,30,390	0/0:5,0:5:11.77:0,12,136	0/1:18,1:19:45.70:46,0,437	0/0:30,0:30:9.10:0,9,194	0/0:15,0:15:9.30:0,9,140	0/0:25,2:27:17.86:0,18,283	0/0:26,0:26:5.15:0,5,144	0/0:20,0:20:12.65:0,13,186	0/0:24,0:24:14.78:0,15,275	0/1:27,0:27:70.63:71,0,517	0/0:26,0:26:18.56:0,19,447	0/0:11,0:11:4.80:0,5,177
chr10	8976208	.	C	CTCTG	16437.88	PASS	AB=0.667;AC=51;AF=0.911;AN=56;BaseQRankSum=-2.458;DP=652;FS=0.000;HRun=0;HaplotypeScore=193.9798;InbreedingCoeff=0.3645;MQ=38.79;MQ0=27;MQRankSum=2.640;QD=28.54;ReadPosRankSum=1.492;VQSLOD=4.5323;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,21:23:14.71:330,15,0	1/1:4,2:7:8.24:199,8,0	0/0:22,0:1:0:0,0,0	0/0:53,0:2:3.01:0,3,54	1/1:3,16:19:6.02:156,6,0	1/1:6,9:15:21.07:545,21,0	1/1:0,18:19:11.66:311,12,0	1/1:4,18:23:47.10:835,47,0	1/1:6,15:23:24.08:610,24,0	1/1:5,21:26:63.22:1519,63,0	1/1:11,6:16:8.74:234,9,0	1/1:13,27:39:57.01:1461,57,0	1/1:7,23:30:48.14:1200,48,0	1/1:13,9:22:1.39:528,1,0	1/1:5,19:24:17.74:423,18,0	1/1:5,26:31:50.96:1322,51,0	1/1:3,10:13:20.26:476,20,0	0/1:3,3:6:7.24:222,0,7	1/1:6,16:24:59.74:1044,60,0	1/1:10,17:27:14.46:388,14,0	1/1:0,17:17:9.03:234,9,0	1/1:12,17:29:20.93:491,21,0	1/1:5,20:26:15.04:339,15,0	1/1:6,14:20:11.05:311,11,0	1/1:6,17:23:20.55:545,21,0	1/1:6,20:26:60.11:1255,60,0	1/1:10,21:32:36.07:838,36,0	1/1:1,10:11:24.08:622,24,0
chr10	8976262	.	T	TACACACAC	20275	PASS	AB=0.833;AC=49;AF=0.907;AN=54;BaseQRankSum=-3.745;DP=729;FS=5.072;HRun=0;HaplotypeScore=280.0977;InbreedingCoeff=0.6109;MQ=53.06;MQ0=11;MQRankSum=-0.422;QD=31.53;ReadPosRankSum=3.411;VQSLOD=3.8606;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:26:10.86:359,11,0	1/1:4,7:11:18:747,18,0	0/0:38,0:20:15.04:0,15,272	0/0:41,0:21:4:0,4,75	1/1:25,0:29:15.86:345,16,0	1/1:17,0:18:15.86:575,16,0	1/1:12,0:13:11.68:259,12,0	1/1:32,0:31:25.58:652,26,0	1/1:17,0:19:15.01:482,15,0	1/1:30,0:35:51.16:1423,51,0	1/1:13,0:24:11.27:320,11,0	1/1:22,2:23:13.27:325,13,0	1/1:22,9:30:42.62:1576,43,0	1/1:15,16:37:56.69:2077,57,0	1/1:26,0:30:23.50:678,24,0	1/1:22,1:36:51.13:1792,51,0	0/1:12,0:15:6.71:172,0,7	./.	1/1:25,1:27:31.80:452,32,0	1/1:21,7:28:38.14:1099,38,0	1/1:17,0:18:17.12:644,17,0	1/1:15,14:43:39.83:1588,40,0	1/1:26,0:26:10.52:393,11,0	1/1:20,0:22:17.93:282,18,0	1/1:22,0:27:18.84:691,19,0	1/1:24,9:33:42.13:1553,42,0	1/1:15,9:26:39.09:1542,39,0	1/1:9,1:10:6.02:249,6,0
chr10	8977510	.	TAC	T	4015.82	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=12.707;DP=801;FS=0.385;HRun=0;HaplotypeScore=95.8317;InbreedingCoeff=0.9999;MQ=67.40;MQ0=3;MQRankSum=-0.706;QD=28.89;ReadPosRankSum=4.630;VQSLOD=5.2840;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,102,1695	0/0:15,0:15:42.14:0,42,709	0/0:36,0:29:68.74:0,69,1103	0/0:40,0:31:61.07:0,61,952	0/0:37,0:37:99:0,99,1663	0/0:33,0:33:93.32:0,93,1576	0/0:29,0:29:63.17:0,63,1034	0/0:47,0:47:99:0,120,1982	0/0:28,0:28:69.24:0,69,1164	1/1:6,27:33:78.21:973,78,0	1/1:2,19:20:51.17:663,51,0	0/0:30,0:30:72.23:0,72,1197	0/0:15,0:15:42.14:0,42,713	0/0:34,0:34:93.30:0,93,1539	1/1:2,24:25:63.20:819,63,0	0/0:18,0:18:48.15:0,48,789	0/0:27,0:27:66.20:0,66,1093	0/0:21,0:21:33.08:0,33,713	0/0:16,0:16:36.12:0,36,604	0/0:24,0:24:60.19:0,60,985	0/0:48,0:48:99:0,126,2075	0/0:22,0:22:57.19:0,57,952	1/1:3,25:28:54.65:703,55,0	1/1:3,28:30:66.21:858,66,0	0/0:21,0:21:57.19:0,57,962	0/0:35,0:35:93.31:0,93,1552	0/0:23,0:23:63.22:0,63,1069	0/0:23,0:23:51.17:0,51,850
chr10	8978591	.	TTCTCTCTCTC	T	952.81	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=4.156;DP=506;FS=0.000;HRun=0;HaplotypeScore=154.3175;InbreedingCoeff=0.8405;MQ=69.13;MQ0=13;MQRankSum=-6.054;QD=7.56;ReadPosRankSum=-0.195;VQSLOD=2.4545;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:3,17:19:5.92:39,6,0	0/0:9,0:9:18.06:0,18,741	0/0:23,0:19:3.48:0,3,121	0/0:25,0:16:12.14:0,12,208	1/1:13,9:22:17.79:119,18,0	1/1:8,4:12:14.87:107,15,0	1/1:11,4:14:20.63:138,21,0	0/0:35,0:34:39.08:0,39,934	0/0:18,0:18:27.09:0,27,827	0/0:33,0:33:51.20:0,51,2032	0/0:23,0:23:33.36:0,33,1092	0/0:11,0:11:21.48:0,21,594	0/0:11,0:11:20.81:0,21,618	0/0:9,0:9:15.02:0,15,433	0/0:17,0:16:20.81:0,21,721	1/1:8,9:17:20.93:349,21,0	0/0:23,0:23:32.93:0,33,820	1/1:6,0:5:6.02:159,6,0	0/0:12,0:12:12.03:0,12,397	0/0:23,0:22:33.11:0,33,1216	0/1:13,0:13:5.59:97,0,6	0/0:14,0:15:39.13:0,39,1607	0/0:19,0:19:26.90:0,27,1017	0/0:19,0:18:33.07:0,33,1006	1/1:8,12:20:20.68:134,21,0	0/0:19,0:19:39.13:0,39,1510	0/0:24,0:24:51.13:0,51,1607	0/0:11,0:9:21.07:0,21,739
chr10	8978633	.	CTGTGTGTGTGTGTGTGTGTG	C	2130	PASS	AB=0.824;AC=18;AF=0.346;AN=52;BaseQRankSum=1.363;DP=482;FS=28.830;HRun=0;HaplotypeScore=238.7560;InbreedingCoeff=0.4613;MQ=39.69;MQ0=46;MQRankSum=-1.144;QD=11.15;ReadPosRankSum=-0.651;VQSLOD=1.0132;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:22:0:0,0,1	0/0:7,0:7:0.47:0,0,1	./.	./.	0/0:18,0:20:6.96:0,7,95	0/0:9,0:18:15.52:0,16,303	0/0:21,0:21:9.81:0,10,107	1/1:23,0:22:3:40,3,0	0/0:14,0:13:3:0,3,25	0/0:20,0:18:27.04:0,27,907	0/0:17,0:17:6.49:0,6,188	1/1:15,4:17:5.49:72,5,0	0/1:7,5:14:3.85:273,0,4	1/1:8,1:9:2.67:37,3,0	0/0:21,0:18:12.50:0,12,292	0/0:15,0:17:7.27:0,7,161	0/0:17,0:13:0:0,0,0	0/0:10,0:11:14.07:0,14,316	1/1:6,4:9:12.01:499,12,0	0/1:16,4:18:16.32:67,0,16	0/0:21,0:14:3.01:0,3,39	1/1:16,3:18:4.72:71,5,0	0/0:20,0:25:19:0,19,572	0/0:23,0:19:15.97:0,16,520	0/1:17,0:20:0.13:0,0,0	0/1:20,0:21:15.37:15,0,261	1/1:14,6:21:10.58:435,11,0	1/1:9,4:9:15.05:776,15,0
chr10	8980030	.	AC	A	904.75	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=8.735;DP=726;FS=0.000;HRun=6;HaplotypeScore=70.6908;InbreedingCoeff=0.9993;MQ=64.11;MQ0=0;MQRankSum=-1.069;QD=28.27;ReadPosRankSum=3.087;VQSLOD=4.2420;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:78.20:0,78,991	0/0:12,0:12:36.12:0,36,474	0/0:27,0:26:72.20:0,72,892	0/0:29,0:29:81.21:0,81,1020	0/0:30,0:30:81.23:0,81,1033	0/0:29,0:29:84.21:0,84,1084	0/0:24,0:24:66.21:0,66,867	0/0:34,0:34:81.26:0,81,1052	0/0:21,0:21:60.18:0,60,774	0/0:28,0:28:78.18:0,78,993	0/0:25,0:25:72.23:0,72,933	0/0:25,0:25:75.19:0,75,923	0/0:35,0:35:96.31:0,96,1260	0/0:18,0:18:45.14:0,45,583	0/0:25,0:25:75.22:0,75,955	0/0:24,0:24:72.23:0,72,946	0/0:23,0:23:69.22:0,69,908	0/0:31,1:32:58.06:0,58,1094	0/0:18,0:18:45.15:0,45,592	0/0:29,0:28:87.16:0,87,1104	1/1:0,32:32:93.23:1000,93,0	0/0:19,0:19:57.19:0,57,750	0/0:29,0:29:78.24:0,78,1010	0/0:17,0:17:45.14:0,45,578	0/0:23,0:23:60.20:0,60,789	0/0:41,0:41:99:0,111,1433	0/0:37,0:37:99:0,108,1420	0/0:11,0:11:30.10:0,30,395
chr10	8980469	.	AT	A	13322.47	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=3.922;DP=686;FS=0.551;HRun=10;HaplotypeScore=70.6033;InbreedingCoeff=0.9209;MQ=76.78;MQ0=0;MQRankSum=-3.072;QD=21.70;ReadPosRankSum=2.561;VQSLOD=5.7724;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,39:44:99:892,104,0	1/1:1,15:16:14.81:357,15,0	0/0:16,1:17:9.90:0,10,298	0/0:15,0:15:6.05:0,6,117	1/1:3,19:22:50.98:443,51,0	1/1:1,23:24:62.98:547,63,0	1/1:3,26:30:74:631,74,0	1/1:5,28:33:80.94:696,81,0	0/0:17,0:17:45.12:0,45,498	1/1:2,24:26:68.97:599,69,0	1/1:2,28:30:77.96:677,78,0	1/1:0,25:25:68.99:599,69,0	1/1:4,24:28:68.98:599,69,0	1/1:3,32:35:92.98:807,93,0	1/1:2,21:23:62.98:547,63,0	1/1:2,23:25:65.98:573,66,0	1/1:0,19:21:55.06:455,55,0	1/1:3,8:11:20.99:182,21,0	1/1:3,10:14:32.03:266,32,0	1/1:2,33:35:89.95:781,90,0	0/0:23,0:23:48.13:0,48,531	1/1:3,13:16:35.98:313,36,0	1/1:3,27:30:74.98:651,75,0	1/1:3,23:27:59.02:501,59,0	1/1:1,18:19:47.99:417,48,0	1/1:3,29:32:86.96:755,87,0	1/1:2,31:33:86.97:755,87,0	1/1:1,14:15:5.82:279,6,0
chr10	8982330	.	TC	T	13792.93	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=17.476;DP=822;FS=2.115;HRun=1;HaplotypeScore=76.7302;InbreedingCoeff=0.9997;MQ=84.98;MQ0=0;MQRankSum=-2.874;QD=39.63;ReadPosRankSum=-0.004;VQSLOD=5.3167;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:57.15:0,57,861	1/1:0,13:13:39.13:546,39,0	0/0:25,0:25:72.22:0,72,1095	0/0:25,0:25:75.01:0,75,1124	0/0:41,0:41:99:0,123,1940	0/0:29,0:29:87.28:0,87,1368	0/0:26,0:26:78.25:0,78,1223	1/1:0,38:38:99:1562,114,0	0/0:36,0:36:99:0,108,1726	0/0:43,0:43:99:0,126,2007	0/0:23,0:23:69.24:0,69,1099	1/1:0,33:33:90.30:1259,90,0	1/1:0,49:49:99:2013,144,0	1/1:0,36:36:90.30:1258,90,0	0/0:54,0:54:99:0,163,2542	0/0:36,0:36:99:0,108,1704	1/1:0,27:27:78.26:1091,78,0	0/0:19,0:19:57.19:0,57,911	1/1:0,14:14:42.12:568,42,0	1/1:0,25:25:72.20:985,72,0	0/0:25,0:25:75.26:0,75,1199	1/1:0,31:31:84.28:1175,84,0	0/0:23,0:23:69.22:0,69,1079	0/0:24,0:24:72.21:0,72,1100	0/0:26,0:26:78.27:0,78,1244	1/1:0,51:51:99:2119,153,0	1/1:0,21:21:63.21:881,63,0	1/1:0,10:10:24.08:336,24,0
chr10	8984477	.	C	CT	21032.73	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=-10.603;DP=705;FS=12.193;HRun=0;HaplotypeScore=66.4897;InbreedingCoeff=0.9942;MQ=85.37;MQ0=1;MQRankSum=-4.141;QD=40.22;ReadPosRankSum=3.590;VQSLOD=4.6586;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,35:36:90.31:1434,90,0	1/1:0,11:11:30.10:467,30,0	0/0:22,0:21:49.48:0,49,711	0/0:26,0:26:74.46:0,74,886	1/1:0,17:17:48.16:766,48,0	1/1:0,31:31:78.27:1245,78,0	1/1:0,28:28:69.24:1101,69,0	1/1:0,28:28:84.25:1290,84,0	1/1:1,27:28:66.22:1048,66,0	0/0:35,0:35:99:0,102,1396	0/0:18,0:18:51.15:0,51,681	1/1:1,22:23:66.22:1041,66,0	1/1:0,32:33:84.28:1325,84,0	1/1:2,25:27:66.23:1054,66,0	0/0:39,0:39:99:0,117,1584	1/1:0,25:25:66.23:1054,66,0	1/1:0,26:26:54.18:862,54,0	1/1:1,18:19:42.14:670,42,0	1/1:0,29:29:87.21:1272,87,0	1/1:0,21:21:63.21:995,63,0	1/1:0,31:31:72.25:1150,72,0	1/1:0,25:25:63.21:1004,63,0	0/0:19,0:19:54.16:0,54,734	0/0:23,0:23:63.11:0,63,821	1/1:0,13:13:36.12:575,36,0	1/1:1,24:25:33.31:1099,33,0	1/1:0,37:37:90.09:1389,90,0	1/1:0,10:10:12.04:191,12,0
chr10	8984747	.	G	GA	5608.57	PASS	AB=0.592;AC=48;AF=0.857;AN=56;BaseQRankSum=-6.883;DP=336;FS=2.667;HRun=11;HaplotypeScore=40.9680;InbreedingCoeff=0.2997;MQ=81.73;MQ0=0;MQRankSum=-3.129;QD=18.51;ReadPosRankSum=3.720;VQSLOD=5.6063;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:5,15:20:50.89:253,0,51	1/1:2,4:6:11.98:112,12,0	0/0:18,0:18:23.56:0,24,177	0/0:13,1:12:20.23:0,20,146	0/1:6,7:13:38.90:156,0,39	1/1:1,8:9:18.04:183,18,0	1/1:2,9:11:27.05:274,27,0	1/1:3,5:8:15.03:152,15,0	1/1:2,7:9:13.63:150,14,0	0/1:1,5:6:5.20:134,0,5	1/1:5,4:9:12.02:122,12,0	1/1:2,10:12:4.12:220,4,0	1/1:4,8:13:0.65:173,1,0	1/1:2,8:10:19.46:211,19,0	1/1:3,10:13:9.83:281,10,0	1/1:3,14:17:30.06:305,30,0	1/1:1,8:10:24.05:243,24,0	1/1:6,16:22:26.84:274,27,0	1/1:5,9:14:11.19:307,11,0	1/1:3,7:10:0.81:190,1,0	1/1:3,4:7:12.02:120,12,0	1/1:2,12:14:33.54:336,34,0	0/1:4,8:12:12.48:236,0,12	1/1:0,16:18:41.75:394,42,0	1/1:4,9:13:16.97:207,17,0	1/1:1,7:8:18.03:181,18,0	1/1:2,11:13:30.06:305,30,0	1/1:0,6:6:9.02:91,9,0
chr10	8985047	.	C	CA	2154.87	PASS	AB=0.726;AC=36;AF=0.667;AN=54;BaseQRankSum=-4.658;DP=293;FS=0.000;HRun=12;HaplotypeScore=34.9472;InbreedingCoeff=0.2814;MQ=66.26;MQ0=4;MQRankSum=-2.255;QD=8.90;ReadPosRankSum=-0.186;VQSLOD=1.2994;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,1:18:9.67:126,10,0	1/1:0,1:1:3:29,3,0	0/1:13,0:8:26.93:27,0,43	0/0:9,0:8:7.99:0,8,49	1/1:1,0:4:6.15:29,6,0	1/1:2,0:11:14.20:71,14,0	0/1:5,4:19:8.92:143,0,9	1/1:9,20:29:51.03:477,51,0	0/1:8,2:10:17.29:17,0,54	0/0:2,0:5:6.10:0,6,18	0/0:2,0:9:5.56:0,6,17	1/1:3,11:14:21.03:204,21,0	0/1:4,9:13:9.88:76,0,10	1/1:5,8:14:2.06:52,2,0	0/0:2,0:6:6.08:0,6,18	1/1:0,0:4:5.68:28,6,0	0/1:6,4:9:41.78:105,0,42	1/1:3,2:16:22.76:114,23,0	0/1:7,8:16:13.99:169,0,14	1/1:1,1:2:3:29,3,0	1/1:5,1:11:12:72,12,0	./.	0/0:1,0:4:4.07:0,4,12	0/0:2,0:16:20.36:0,20,59	1/1:0,0:2:5.68:28,6,0	1/1:6,11:17:27.04:263,27,0	1/1:2,5:7:8.90:87,9,0	1/1:0,9:9:18.03:175,18,0
chr10	8985179	.	C	CAT	265.79	PASS	AB=1.000;AC=3;AF=0.056;AN=54;BaseQRankSum=-3.417;DP=303;FS=16.574;HRun=0;HaplotypeScore=53.1315;InbreedingCoeff=0.5964;MQ=67.17;MQ0=0;MQRankSum=1.003;QD=15.63;ReadPosRankSum=1.903;VQSLOD=1.7634;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:45.15:0,45,584	0/0:1,0:1:3.01:0,3,39	0/0:10,0:6:6.09:0,6,30	0/1:6,0:4:0:0,0,0	0/0:6,0:6:15.05:0,15,194	0/0:13,0:13:27.03:0,27,305	0/0:11,0:11:21.01:0,21,240	0/0:31,0:31:81.19:0,81,986	1/1:2,9:11:21.07:357,21,0	0/0:15,0:14:33.11:0,33,426	0/0:9,0:9:18.06:0,18,234	0/0:9,0:9:21.07:0,21,273	0/0:15,0:15:27.09:0,27,351	0/0:7,0:7:18.04:0,18,219	0/0:10,0:10:23.93:0,24,278	0/0:4,0:4:11.98:0,12,110	0/0:13,0:13:39.07:0,39,460	0/0:17,0:17:51.13:0,51,626	0/0:12,0:12:30.09:0,30,379	./.	0/0:20,0:20:32.93:0,33,414	0/0:2,0:2:3.01:0,3,39	0/0:10,0:10:27.09:0,27,351	0/0:10,0:10:18.06:0,18,233	0/0:3,0:3:6.02:0,6,78	0/0:15,0:15:45.14:0,45,570	0/0:14,0:14:30.07:0,30,362	0/0:11,0:11:27.09:0,27,361
chr10	8985209	.	CATAT	C	1961.08	PASS	AB=0.649;AC=27;AF=0.587;AN=46;BaseQRankSum=0.968;DP=245;FS=0.830;HRun=0;HaplotypeScore=57.0063;InbreedingCoeff=0.3993;MQ=63.91;MQ0=1;MQRankSum=-2.276;QD=12.49;ReadPosRankSum=-0.629;VQSLOD=2.7873;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:19:20.54:0,21,385	1/1:0,1:1:3.01:49,3,0	./.	0/0:13,0:7:4.04:0,4,16	0/0:4,0:5:5.22:0,5,119	0/1:3,2:10:25.94:38,0,26	./.	1/1:18,16:37:42.98:790,43,0	1/1:4,4:8:8.24:104,8,0	1/1:4,1:10:18.02:187,18,0	1/1:1,0:11:5.84:56,6,0	1/1:4,0:4:3.01:49,3,0	1/1:5,3:8:6.02:98,6,0	1/1:2,2:4:3.01:49,3,0	1/1:4,0:9:8.97:84,9,0	0/0:2,0:2:6.02:0,6,146	0/1:5,4:12:16.75:175,0,17	0/0:11,0:18:29.57:0,30,519	0/0:5,0:6:5.11:0,5,21	0/0:0,0:1:0:0,0,0	1/1:5,0:12:2.97:27,3,0	0/0:2,0:2:3.01:0,3,60	./.	./.	./.	1/1:7,4:11:12.02:152,12,0	1/1:6,4:10:12.04:195,12,0	0/1:5,1:8:13.15:64,0,13
chr10	8986732	.	CCTG	C	170.03	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=2.913;DP=387;FS=0.000;HRun=0;HaplotypeScore=62.8400;InbreedingCoeff=0.4468;MQ=53.12;MQ0=1;MQRankSum=-0.228;QD=5.15;ReadPosRankSum=-0.482;VQSLOD=1.8141;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:24:45.07:0,45,761	0/0:7,0:7:20.98:0,21,292	0/0:31,0:13:23.80:0,24,370	0/0:28,0:14:19.29:0,19,251	0/0:10,1:11:15:0,15,269	0/1:9,0:9:7.45:7,0,231	0/0:24,0:24:62.89:0,63,1070	0/0:9,0:9:18.02:0,18,264	0/0:17,0:17:38.88:0,39,549	0/0:9,0:9:24.96:0,25,435	0/0:12,0:12:18.02:0,18,240	0/0:10,0:10:30.06:0,30,538	0/0:8,0:8:24.06:0,24,422	0/0:10,0:10:27.09:0,27,537	0/0:15,0:15:38.97:0,39,667	0/0:18,0:17:44.16:0,44,789	0/0:13,0:13:29.70:0,30,430	0/0:13,0:13:33.06:0,33,582	0/0:10,0:10:15.02:0,15,196	0/0:12,0:12:17.96:0,18,250	1/1:6,18:23:18.06:259,18,0	0/0:9,0:9:4.24:0,4,112	0/0:10,0:9:15:0,15,184	0/0:24,0:24:38:0,38,806	0/0:14,0:14:7.79:0,8,361	0/0:6,0:6:12.02:0,12,173	0/0:8,0:8:5.09:0,5,289	0/0:1,0:1:2.99:0,3,23
chr10	8987453	.	A	AAC	835.89	PASS	AB=0.837;AC=16;AF=0.286;AN=56;BaseQRankSum=3.483;DP=736;FS=0.000;HRun=0;HaplotypeScore=151.0011;InbreedingCoeff=0.3337;MQ=52.51;MQ0=21;MQRankSum=-1.210;QD=2.96;ReadPosRankSum=-4.190;VQSLOD=1.4038;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:13,17:30:6.74:102,7,0	0/0:17,0:17:16.85:0,17,158	0/0:36,0:13:12.02:0,12,130	0/0:38,0:16:17.63:0,18,168	0/1:18,4:22:5.21:334,0,5	0/1:9,22:30:20.48:43,0,20	1/1:7,18:25:3.01:43,3,0	0/1:24,0:24:7.72:8,0,365	1/1:26,0:26:1.25:3,1,0	0/0:24,0:24:42.92:0,43,446	0/1:25,0:26:27.51:28,0,191	0/0:34,0:33:22.93:0,23,235	0/0:30,0:30:37.28:0,37,365	0/0:27,0:27:22.61:0,23,221	0/0:32,0:33:17.26:0,17,382	1/1:6,11:17:3.01:46,3,0	0/0:20,0:19:7.47:0,7,178	1/1:6,12:19:20.81:241,21,0	0/0:13,0:12:12.03:0,12,137	0/0:27,0:28:29.91:0,30,296	0/0:32,0:32:12.82:0,13,51	0/0:28,0:28:21.52:0,22,232	0/1:27,0:27:47.69:48,0,183	0/0:26,0:27:20.50:0,21,222	0/1:11,23:35:39.52:101,0,40	0/0:39,0:38:67.50:0,68,727	0/0:24,0:24:27.36:0,27,277	0/0:3,0:3:9.02:0,9,93
chr10	8987473	.	CAT	C	1883.60	PASS	AB=0.979;AC=27;AF=0.482;AN=56;BaseQRankSum=8.133;DP=700;FS=7.246;HRun=0;HaplotypeScore=154.0338;InbreedingCoeff=-0.7216;MQ=50.49;MQ0=22;MQRankSum=-1.977;QD=2.77;ReadPosRankSum=-1.164;VQSLOD=2.0516;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:30:45.04:80,0,45	0/1:17,0:17:8.78:111,0,9	0/1:23,0:6:23.97:24,0,60	0/1:23,0:6:2.65:3,0,72	0/1:20,0:20:75.78:122,0,76	0/1:28,0:27:12.02:12,0,108	0/1:24,0:24:16.73:67,0,17	0/1:22,0:22:36.45:36,0,273	0/1:1,20:21:6.61:14,0,7	0/1:28,0:28:99:155,0,214	0/0:17,0:17:6.74:0,7,143	0/1:33,0:32:99:134,0,117	0/1:29,0:29:99:100,0,169	0/1:26,0:25:83.82:159,0,84	0/1:34,0:34:27.98:28,0,210	0/1:15,0:15:0.50:61,0,0	0/1:22,0:20:24.78:25,0,46	0/1:18,0:18:56.16:56,0,58	0/1:9,0:8:25.66:26,0,83	0/1:30,0:30:99:232,0,119	1/1:3,29:31:15.05:226,15,0	0/1:25,0:25:59.81:60,0,111	0/1:29,0:29:57.20:57,0,115	0/1:37,0:36:26.72:27,0,118	0/1:36,0:36:53.30:53,0,64	0/1:38,0:37:99:133,0,339	0/1:29,0:29:33.51:34,0,111	0/0:3,1:4:8.12:0,8,43
chr10	8987475	.	TACACACACACAC	T	4628.11	PASS	AB=0.829;AC=22;AF=0.407;AN=54;BaseQRankSum=-2.834;DP=692;FS=0.000;HRun=0;HaplotypeScore=217.3933;InbreedingCoeff=0.6068;MQ=50.26;MQ0=22;MQRankSum=-3.896;QD=14.60;ReadPosRankSum=1.499;VQSLOD=3.1712;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:27:12.81:0,13,671	1/1:4,11:16:20.83:652,21,0	./.	0/0:26,0:7:2.92:0,3,17	0/0:20,0:20:24.87:0,25,879	0/0:25,0:25:11.88:0,12,557	0/0:23,0:23:12.47:0,12,201	0/1:25,0:25:50.47:50,0,123	0/0:21,0:21:5.93:0,6,54	0/0:16,0:28:24.38:0,24,277	0/0:10,0:16:2.02:0,2,114	0/1:14,20:33:2.58:346,0,3	1/1:13,13:26:13.83:394,14,0	1/1:11,14:24:14.31:429,14,0	0/1:19,0:35:1.94:2,0,80	0/0:14,0:15:6.92:0,7,204	1/1:11,12:21:11.77:353,12,0	0/0:17,0:18:27.98:0,28,961	0/1:9,0:8:1.41:171,0,1	1/1:12,18:30:15.76:663,16,0	0/0:32,0:31:18.05:0,18,478	1/1:9,15:25:15.04:296,15,0	0/0:11,0:29:4.10:0,4,43	0/0:18,0:35:2.94:0,3,11	0/0:34,0:36:13.49:0,13,488	1/1:18,18:35:53.53:892,54,0	1/1:11,16:27:10.62:331,11,0	1/1:6,0:6:5.98:48,6,0
chr10	8987659	.	A	AC	4386.52	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-13.016;DP=832;FS=3.600;HRun=0;HaplotypeScore=79.8422;InbreedingCoeff=0.9996;MQ=73.19;MQ0=0;MQRankSum=0.692;QD=43.01;ReadPosRankSum=1.667;VQSLOD=5.4689;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:66,0:66:99:0,199,2745	0/0:10,0:10:30.09:0,30,404	0/0:17,0:17:47.96:0,48,547	0/0:13,0:14:36.55:0,37,450	0/0:28,0:28:81.26:0,81,1116	0/0:22,0:22:66.22:0,66,919	0/0:33,0:33:96.31:0,96,1325	0/0:33,0:33:96.32:0,96,1327	1/1:1,36:38:96.31:1510,96,0	0/0:32,0:32:90.30:0,90,1243	0/0:20,0:20:60.10:0,60,794	0/0:34,0:34:99:0,99,1365	0/0:43,0:43:99:0,126,1762	0/0:34,0:34:96.31:0,96,1326	0/0:46,0:46:99:0,135,1883	0/0:34,0:34:99:0,102,1393	0/0:37,0:37:99:0,111,1552	0/0:16,0:16:45.15:0,45,629	0/0:14,0:14:39.11:0,39,526	0/0:26,0:26:78.26:0,78,1086	1/1:0,64:64:99:2877,181,0	0/0:35,0:35:99:0,102,1393	0/0:19,0:19:54.11:0,54,728	0/0:28,0:28:84.27:0,84,1159	0/0:28,0:28:81.22:0,81,1096	0/0:22,0:21:57.18:0,57,783	0/0:24,0:24:72.24:0,72,1006	0/0:15,0:15:45.15:0,45,629
chr10	8992233	.	TG	T	5956.33	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=13.856;DP=763;FS=1.406;HRun=4;HaplotypeScore=70.8354;InbreedingCoeff=0.9998;MQ=81.30;MQ0=0;MQRankSum=-2.257;QD=32.02;ReadPosRankSum=1.550;VQSLOD=5.4262;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,40:42:99:1367,114,0	0/0:18,0:18:48.13:0,48,635	0/0:27,0:27:74.55:0,75,953	0/0:17,0:16:27.71:0,28,372	1/1:1,24:25:57.13:667,57,0	1/1:0,20:20:60.18:719,60,0	1/1:1,24:25:66.20:792,66,0	0/0:33,0:33:87.28:0,87,1198	0/0:26,0:26:78.26:0,78,1088	0/0:21,0:21:60.20:0,60,839	0/0:22,0:22:60.20:0,60,839	0/0:36,0:36:99:0,102,1350	0/0:30,0:30:81.24:0,81,1096	0/0:31,0:31:90.26:0,90,1195	0/0:43,0:43:99:0,126,1745	1/1:0,35:35:96.29:1152,96,0	0/0:30,0:30:87.25:0,87,1171	1/1:0,14:14:36.11:431,36,0	0/0:20,0:20:54.18:0,54,755	0/0:30,0:30:84.26:0,84,1141	0/0:36,0:36:96.27:0,96,1290	0/0:30,0:30:90.29:0,90,1242	0/0:21,0:21:63.19:0,63,862	0/0:24,0:24:72.21:0,72,959	1/1:1,24:25:69.21:828,69,0	0/0:39,0:39:99:0,111,1539	0/0:31,0:31:90.26:0,90,1222	0/0:12,0:12:36.12:0,36,504
chr10	8996456	.	ATG	A	125.47	PASS	AB=0.889;AC=9;AF=0.321;AN=28;BaseQRankSum=1.508;DP=123;FS=2.633;HRun=0;HaplotypeScore=48.3670;InbreedingCoeff=-0.0024;MQ=65.03;MQ0=3;MQRankSum=-0.971;QD=2.37;ReadPosRankSum=0.971;VQSLOD=1.1202;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:15,0:5:4.52:0,5,24	0/1:28,0:8:4.36:4,0,20	./.	./.	./.	0/0:21,1:22:20.86:0,21,457	1/1:1,0:1:3:25,3,0	0/0:6,0:6:13.80:0,14,107	0/0:6,0:6:12.46:0,12,101	./.	./.	./.	0/0:4,0:4:5.12:0,5,29	1/1:2,0:2:3:25,3,0	0/0:12,0:12:9.20:0,9,72	0/1:4,7:11:11.20:114,0,11	0/0:2,0:2:6.01:0,6,56	./.	./.	./.	./.	./.	./.	0/1:3,0:3:18.65:19,0,23	0/1:3,0:3:17.52:20,0,18	0/1:4,1:4:15.16:24,0,15
chr10	8996494	.	GTA	G	2413.61	PASS	AC=30;AF=0.600;AN=50;BaseQRankSum=0.426;DP=145;FS=0.000;HRun=0;HaplotypeScore=32.4890;InbreedingCoeff=0.5878;MQ=70.70;MQ0=0;MQRankSum=2.211;QD=25.68;ReadPosRankSum=0.679;VQSLOD=3.8167;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:4:9.01:0,9,124	1/1:0,3:3:3.01:39,3,0	0/0:9,0:5:1.23:0,1,22	0/0:16,0:6:2.52:0,3,36	0/0:2,0:2:6.02:0,6,98	0/0:4,0:4:9.03:0,9,149	0/0:2,0:2:6.02:0,6,102	1/1:5,27:32:80.07:1010,80,0	0/0:1,0:1:3.01:0,3,45	1/1:1,5:6:18.06:225,18,0	1/1:0,8:8:18.06:234,18,0	./.	1/1:2,0:2:3.01:39,3,0	1/1:0,1:1:3.01:39,3,0	1/1:1,5:6:6.02:78,6,0	0/0:2,0:2:6.02:0,6,102	1/1:1,11:12:20.79:273,21,0	0/0:9,0:9:10.27:0,10,148	1/1:0,3:3:9.03:117,9,0	1/1:0,4:4:6.02:78,6,0	1/1:0,2:2:6.02:78,6,0	./.	1/1:1,0:1:3.01:39,3,0	0/0:1,0:1:0:0,0,0	./.	1/1:0,4:4:12.02:140,12,0	1/1:0,4:4:3.01:39,3,0	1/1:2,4:6:12.04:148,12,0
chr10	8997377	.	A	ACT	1170.14	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-6.489;DP=778;FS=0.763;HRun=0;HaplotypeScore=90.3750;InbreedingCoeff=0.9998;MQ=83.96;MQ0=0;MQRankSum=-1.029;QD=40.35;ReadPosRankSum=0.689;VQSLOD=5.3979;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,117,1637	0/0:15,0:15:45.15:0,45,644	0/0:27,0:27:78.26:0,78,1091	0/0:32,0:32:57.93:0,58,1072	0/0:36,0:36:99:0,102,1423	0/0:26,0:26:72.23:0,72,1013	0/0:39,0:39:99:0,108,1527	0/0:31,0:31:90.29:0,90,1255	1/1:2,26:29:69.24:1265,69,0	0/0:29,0:29:81.27:0,81,1161	0/0:15,0:15:36.12:0,36,516	0/0:27,0:27:78.26:0,78,1117	0/0:22,0:22:66.21:0,66,926	0/0:35,0:35:99:0,102,1425	0/0:49,0:49:99:0,147,2089	0/0:35,0:35:99:0,102,1462	0/0:27,0:27:75.25:0,75,1073	0/0:23,0:23:63.18:0,63,882	0/0:16,0:16:48.15:0,48,653	0/0:30,0:30:90.29:0,90,1270	0/0:26,0:26:72.23:0,72,1014	0/0:30,0:30:84.27:0,84,1185	0/0:23,0:23:63.21:0,63,902	0/0:22,0:22:60.20:0,60,860	0/0:17,0:17:51.17:0,51,727	0/0:25,0:25:72.24:0,72,1029	0/0:35,0:35:96.31:0,96,1355	0/0:16,0:16:42.14:0,42,602
chr10	9002127	.	ACC	A	3396.90	PASS	AB=0.581;AC=38;AF=0.864;AN=44;BaseQRankSum=-1.858;DP=353;FS=8.104;HRun=2;HaplotypeScore=81.8181;InbreedingCoeff=0.3107;MQ=44.49;MQ0=26;MQRankSum=1.137;QD=12.26;ReadPosRankSum=3.644;VQSLOD=0.5643;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,2:7:3.01:46,3,0	1/1:0,7:7:1.96:37,2,0	./.	./.	1/1:6,9:15:9.03:137,9,0	1/1:2,14:14:1.25:3,1,0	1/1:10,4:13:8.66:121,9,0	0/0:3,0:2:2.60:0,3,10	0/1:2,7:8:0:0,0,0	1/1:18,5:21:58.07:633,58,0	1/1:6,13:19:3.01:30,3,0	1/1:11,3:14:26.45:328,26,0	1/1:12,5:17:24.11:225,24,0	./.	1/1:12,0:11:15.05:232,15,0	1/1:7,5:11:15.52:214,16,0	0/0:4,11:13:1.55:0,2,4	1/1:2,1:3:6.02:74,6,0	1/1:2,5:7:15.48:147,15,0	0/1:6,12:17:15.53:48,0,16	./.	./.	1/1:4,10:14:2.54:42,3,0	./.	1/1:8,4:12:15.05:219,15,0	1/1:9,8:15:16.31:267,16,0	1/1:21,5:25:38.51:443,39,0	1/1:10,3:10:13.59:153,14,0
chr10	9005078	.	G	GTCTC	4141.67	PASS	AB=1.000;AC=50;AF=0.893;AN=56;BaseQRankSum=-1.113;DP=594;FS=4.480;HRun=0;HaplotypeScore=207.1941;InbreedingCoeff=0.3594;MQ=61.56;MQ0=4;MQRankSum=-1.830;QD=7.54;ReadPosRankSum=-0.228;VQSLOD=2.8128;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:34,0:34:8.92:167,9,0	1/1:10,0:10:9.03:146,9,0	0/0:24,0:18:3:0,3,26	0/1:33,0:22:8.65:9,0,28	1/1:27,0:27:15.04:226,15,0	1/1:17,0:16:5.52:78,6,0	1/1:34,0:33:12.01:137,12,0	1/1:31,0:29:20.74:240,21,0	1/1:20,2:23:14.78:212,15,0	1/1:27,0:24:35.21:388,35,0	1/1:25,0:24:5.83:77,6,0	1/1:17,0:16:1.36:4,1,0	1/1:23,0:23:12.79:161,13,0	1/1:13,0:10:3.01:50,3,0	1/1:33,0:32:14.30:155,14,0	1/1:21,0:20:21.03:285,21,0	1/1:8,0:9:18.04:264,18,0	1/1:9,0:9:3.01:40,3,0	1/1:9,0:9:11.99:142,12,0	1/1:23,0:22:8.03:88,8,0	0/0:21,0:21:2.92:0,3,17	0/1:20,0:18:0.35:1,0,0	1/1:17,0:16:3.89:28,4,0	1/1:15,0:16:8.83:89,9,0	1/1:29,0:28:26.33:423,26,0	1/1:27,0:25:25.68:286,26,0	1/1:9,2:12:21.07:366,21,0	1/1:7,0:7:6.02:79,6,0
chr10	9005103	.	TCTCGCGCGCGCGCGCG	T	2818.50	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=1.237;DP=553;FS=19.252;HRun=0;HaplotypeScore=252.0339;InbreedingCoeff=-0.1617;MQ=50.67;MQ0=5;MQRankSum=-6.635;QD=10.97;ReadPosRankSum=-3.188;VQSLOD=0.6980;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:32.72:0,33,1992	0/1:10,0:9:74.77:75,0,288	0/0:10,0:6:6.31:0,6,50	0/0:25,0:16:14.06:0,14,380	0/0:26,0:26:27.01:0,27,1141	0/0:16,0:14:13.36:0,13,955	0/0:33,0:32:32.61:0,33,1583	0/1:31,0:29:99:875,0,269	0/1:15,0:15:99:216,0,356	0/1:27,0:24:29.27:29,0,1448	0/0:23,0:22:8.74:0,9,163	0/1:15,0:14:7.34:343,0,7	0/1:22,0:22:99:424,0,201	0/0:13,0:10:3.01:0,3,46	0/1:33,0:32:5.65:6,0,444	0/0:20,0:19:30.05:0,30,1020	0/0:10,0:9:16.38:0,16,328	0/0:10,0:10:27.01:0,27,1033	0/1:14,0:14:99:213,0,246	0/1:17,0:16:19.46:85,0,19	1/1:5,10:15:0.47:1,0,0	1/1:15,0:13:0.88:2,1,0	0/0:19,0:18:17.39:0,17,350	0/0:24,0:24:22.03:0,22,384	0/0:33,0:32:46.16:0,46,2381	0/1:31,0:28:99:553,0,627	0/1:12,0:12:99:140,0,366	0/0:6,0:6:5.10:0,5,24
chr10	9005105	.	TCGCGCGCGCGCG	T	4749.89	PASS	AB=0.909;AC=25;AF=0.446;AN=56;BaseQRankSum=-1.204;DP=531;FS=3.121;HRun=0;HaplotypeScore=213.1245;InbreedingCoeff=0.0662;MQ=50.79;MQ0=4;MQRankSum=-6.686;QD=14.57;ReadPosRankSum=-2.614;VQSLOD=3.3527;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:32.83:0,33,1601	0/1:8,1:9:99:135,0,173	0/0:8,0:5:0.09:0,0,0	0/1:23,0:15:7.25:7,0,213	0/0:27,0:27:26.61:0,27,943	0/0:16,0:14:13.59:0,14,787	0/0:34,0:33:29.04:0,29,1394	1/1:18,12:28:16.25:1317,16,0	0/1:13,0:15:99:182,0,181	0/1:23,0:22:99:152,0,866	0/1:22,0:21:5:27,0,5	1/1:10,3:14:15.05:459,15,0	1/1:16,3:21:0.31:705,0,0	0/0:10,3:10:2.90:0,3,16	0/1:29,0:29:99:108,0,136	0/0:20,0:19:14.96:0,15,705	0/1:10,0:9:39.04:39,0,104	0/0:10,0:10:18.06:0,18,767	0/1:11,3:14:0.50:332,0,1	1/1:13,3:15:5.98:127,6,0	1/1:10,0:10:0.47:1,0,0	1/1:13,1:13:0.47:1,0,0	0/0:17,0:18:2.92:0,3,119	0/1:22,0:24:8.73:9,0,125	0/0:31,0:30:36.22:0,36,1811	0/1:22,6:27:99:886,0,110	0/1:10,1:12:74.84:212,0,75	1/1:4,0:4:3.01:52,3,0
chr10	9006630	.	GCTTCC	G	24441.37	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=2.592;DP=530;FS=8.685;HRun=0;HaplotypeScore=156.6853;InbreedingCoeff=0.9543;MQ=73.76;MQ0=0;MQRankSum=-9.394;QD=49.38;ReadPosRankSum=5.772;VQSLOD=4.4003;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,10:13:24.08:511,24,0	1/1:1,9:10:27.09:530,27,0	0/0:22,0:22:60.19:0,60,1670	0/0:13,0:13:31.33:0,31,770	1/1:3,19:22:42.14:884,42,0	1/1:1,18:19:51.18:1058,51,0	1/1:2,11:13:30.10:629,30,0	1/1:3,32:35:96.28:1885,96,0	1/1:0,17:17:51.18:1086,51,0	1/1:1,18:19:51.18:1087,51,0	1/1:0,20:20:51.17:1051,51,0	1/1:2,17:19:27.18:998,27,0	1/1:1,14:15:36.12:756,36,0	1/1:0,18:18:54.19:1120,54,0	1/1:2,16:18:42.14:895,42,0	1/1:2,25:27:60.21:1253,60,0	1/1:5,13:18:27.56:550,28,0	1/1:3,14:17:24.08:511,24,0	1/1:4,15:19:39.13:831,39,0	1/1:0,30:30:90.31:1873,90,0	1/1:1,8:9:18.06:365,18,0	1/1:0,15:15:33.11:689,33,0	1/1:6,20:26:45.15:922,45,0	1/1:3,10:13:14.52:305,15,0	1/1:1,21:22:60.21:1257,60,0	1/1:2,29:31:87.28:1808,87,0	1/1:2,23:25:66.23:1396,66,0	1/1:0,5:5:9.03:192,9,0
chr10	9006905	.	C	CG	24037.67	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=6.876;DP=676;FS=0.594;HRun=2;HaplotypeScore=149.5842;InbreedingCoeff=0.9877;MQ=86.87;MQ0=0;MQRankSum=-10.821;QD=38.16;ReadPosRankSum=6.276;VQSLOD=3.9144;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,19:19:48.12:666,48,0	1/1:0,5:5:15.05:216,15,0	0/0:23,0:23:67.60:0,68,758	0/0:23,0:23:57.13:0,57,649	1/1:3,26:29:78.26:1118,78,0	1/1:0,23:23:66.22:948,66,0	1/1:2,19:21:51.17:733,51,0	1/1:4,30:34:84.27:1189,84,0	1/1:3,19:22:60.19:842,60,0	1/1:3,33:36:99:1381,99,0	1/1:0,24:24:63.21:905,63,0	1/1:1,22:23:63.21:905,63,0	1/1:1,22:23:66.22:948,66,0	1/1:0,30:30:81.27:1165,81,0	1/1:3,39:42:99:1423,99,0	1/1:1,31:32:84.28:1208,84,0	1/1:1,22:23:66.22:949,66,0	1/1:0,23:23:66.22:949,66,0	1/1:0,19:19:57.19:819,57,0	1/1:0,31:31:84.22:1162,84,0	1/1:0,20:20:51.17:733,51,0	1/1:1,19:20:42.14:593,42,0	1/1:1,17:18:48.16:690,48,0	1/1:0,12:12:36.12:517,36,0	1/1:1,26:27:66.22:937,66,0	1/1:0,30:30:90.14:1227,90,0	1/1:1,37:38:99:1555,111,0	1/1:0,6:6:18.06:259,18,0
chr10	9007072	.	T	TA	7169.04	PASS	AB=1.000;AC=27;AF=0.482;AN=56;BaseQRankSum=-6.766;DP=592;FS=3.999;HRun=4;HaplotypeScore=105.9768;InbreedingCoeff=0.9549;MQ=77.11;MQ0=0;MQRankSum=-0.249;QD=25.79;ReadPosRankSum=-0.646;VQSLOD=3.2475;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:16.97:0,17,189	1/1:2,7:9:18.06:224,18,0	0/0:17,0:17:42.11:0,42,469	0/0:20,0:20:56.02:0,56,576	0/0:24,0:24:32.10:0,32,284	0/0:16,0:16:39.47:0,39,207	0/0:17,0:17:36.95:0,37,186	1/1:8,24:32:67.07:753,67,0	1/1:10,5:15:12.85:239,13,0	0/0:31,0:31:51.04:0,51,393	0/0:30,0:30:19.65:0,20,287	1/1:3,15:19:39.08:466,39,0	1/1:3,17:20:52.05:633,52,0	1/1:6,17:23:52.05:634,52,0	0/0:26,0:26:48.57:0,49,255	0/0:28,0:28:39.77:0,40,281	1/1:3,19:23:51.15:619,51,0	0/0:22,0:22:46.06:0,46,257	1/1:1,19:20:43.32:678,43,0	1/1:1,26:27:66.08:762,66,0	1/1:4,11:15:32.62:408,33,0	1/1:3,16:19:38.57:463,39,0	0/0:30,0:30:55.39:0,55,424	0/0:15,1:16:6.06:0,6,171	0/0:19,0:19:49.55:0,50,307	1/1:5,13:21:34:447,34,0	1/1:6,28:34:66.47:843,66,0	0/1:1,0:1:0:0,0,0
chr10	9007379	.	G	GGAA	4798.46	PASS	AB=0.993;AC=29;AF=0.518;AN=56;BaseQRankSum=7.954;DP=637;FS=3.039;HRun=0;HaplotypeScore=258.8579;InbreedingCoeff=-0.6241;MQ=44.34;MQ0=23;MQRankSum=-8.116;QD=8.15;ReadPosRankSum=8.960;VQSLOD=3.3365;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:30:92.13:151,0,92	0/1:14,0:13:33.07:33,0,78	0/0:29,0:12:15.75:0,16,355	0/0:19,0:12:16.39:0,16,234	0/1:22,0:20:73.55:88,0,74	0/1:21,0:21:68.04:297,0,68	0/1:22,0:22:74.14:117,0,74	0/1:26,0:20:57.81:58,0,109	0/1:17,0:17:17.60:219,0,18	0/1:26,0:23:99:219,0,103	0/1:16,0:16:35.18:144,0,35	0/1:24,0:24:60.22:276,0,60	1/1:33,0:33:43.72:479,44,0	0/1:23,0:23:4.32:271,0,4	0/1:22,0:21:80.92:194,0,81	1/1:26,0:26:33.86:454,34,0	0/1:26,0:26:75.79:142,0,76	0/1:11,1:9:15.98:69,0,16	0/1:21,0:18:56.84:101,0,57	0/1:31,0:31:99:189,0,107	0/1:17,0:14:58.91:86,0,59	1/1:21,0:20:3.01:187,3,0	0/1:22,0:22:62.78:111,0,63	0/1:30,3:30:30.98:116,0,31	0/1:22,0:21:63.58:188,0,64	0/1:33,0:32:41.69:352,0,42	0/1:24,0:24:98.68:254,0,99	0/1:2,0:2:3.22:3,0,12
chr10	9007385	.	G	GGAA	18157.16	PASS	AB=1.000;AC=48;AF=0.857;AN=56;BaseQRankSum=-2.448;DP=599;FS=9.800;HRun=0;HaplotypeScore=194.3809;InbreedingCoeff=0.3950;MQ=39.63;MQ0=25;MQRankSum=-2.301;QD=32.60;ReadPosRankSum=3.339;VQSLOD=4.8160;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:31,0:28:48.85:675,49,0	1/1:12,0:12:29.17:355,29,0	0/0:25,0:9:23.66:0,24,323	0/0:17,0:10:19.38:0,19,235	1/1:21,0:19:29.75:458,30,0	1/1:20,0:20:60.08:999,60,0	1/1:19,0:19:51.02:744,51,0	1/1:26,0:18:45.08:642,45,0	1/1:16,0:16:40.58:574,41,0	1/1:27,0:24:38.13:969,38,0	1/1:15,0:14:39.08:630,39,0	1/1:21,0:21:54.09:966,54,0	1/1:26,5:32:45.35:1257,45,0	1/1:21,0:21:54.16:990,54,0	1/1:20,0:19:44.15:889,44,0	1/1:25,0:25:65.45:1141,65,0	0/1:22,0:23:21.79:423,0,22	1/1:12,0:9:8.90:104,9,0	1/1:24,0:21:0.85:352,1,0	1/1:27,0:27:39.83:981,40,0	1/1:16,0:13:25.76:290,26,0	1/1:20,0:19:51.49:785,51,0	1/1:21,0:21:57.11:800,57,0	0/1:33,0:29:8.73:243,0,9	1/1:21,0:20:57.02:840,57,0	1/1:29,0:28:44.42:1247,44,0	0/1:22,0:22:17.77:789,0,18	0/1:2,0:2:7.55:15,0,8
chr10	9007387	.	AGG	A	5366.45	PASS	AB=0.880;AC=38;AF=0.679;AN=56;BaseQRankSum=-2.256;DP=585;FS=5.309;HRun=2;HaplotypeScore=224.7643;InbreedingCoeff=0.0066;MQ=37.72;MQ0=25;MQRankSum=1.692;QD=9.90;ReadPosRankSum=4.929;VQSLOD=1.9129;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:27,2:26:47.55:140,0,48	1/1:11,2:12:4.61:137,5,0	0/0:24,0:8:21.07:0,21,423	0/0:17,0:10:11.41:0,11,280	1/1:16,5:19:14.99:180,15,0	1/1:18,2:20:40.71:307,41,0	0/1:9,10:19:1.75:303,0,2	1/1:14,11:17:41.70:384,42,0	0/1:14,2:16:61.48:134,0,61	0/1:20,5:22:2.85:253,0,3	1/1:11,3:13:30.14:224,30,0	1/1:19,1:20:30.34:208,30,0	0/1:27,4:31:14.10:251,0,14	1/1:15,4:20:28.77:222,29,0	1/1:14,6:19:11.11:307,11,0	1/1:20,4:24:15.57:205,16,0	0/1:20,3:23:99:129,0,187	0/1:11,1:9:23.13:23,0,23	0/1:22,2:21:36.33:36,0,291	1/1:19,8:27:19.84:395,20,0	0/1:14,2:13:18.24:110,0,18	1/1:19,1:19:17.04:227,17,0	1/1:16,5:21:52.06:428,52,0	0/1:30,3:29:55.58:56,0,58	1/1:16,5:20:21.61:310,22,0	0/1:24,4:27:80.95:252,0,81	0/1:19,1:20:99:146,0,125	0/0:2,0:2:6.02:0,6,68
chr10	9007390	.	A	AG	5419.06	PASS	AB=0.771;AC=40;AF=0.714;AN=56;BaseQRankSum=-2.524;DP=570;FS=3.247;HRun=2;HaplotypeScore=218.0675;InbreedingCoeff=0.0556;MQ=35.41;MQ0=25;MQRankSum=0.651;QD=10.24;ReadPosRankSum=7.424;VQSLOD=2.9498;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:18,10:25:26.65:160,0,27	1/1:10,3:12:0.36:87,0,0	0/0:24,0:8:15.05:0,15,195	0/0:15,0:8:13.80:0,14,141	1/1:10,11:19:26.90:172,27,0	1/1:5,13:18:44.34:349,44,0	1/1:14,4:18:31.11:208,31,0	1/1:23,2:17:17.56:169,18,0	0/1:9,7:16:34.82:125,0,35	0/1:16,9:22:20.27:305,0,20	1/1:5,9:13:29.23:183,29,0	1/1:4,15:19:45.22:332,45,0	1/1:13,16:29:16.43:373,16,0	1/1:10,10:20:34.84:298,35,0	1/1:11,8:18:38.41:329,38,0	1/1:9,15:24:39.48:422,39,0	0/1:20,3:23:70.59:71,0,90	0/1:11,1:9:12.19:25,0,12	0/1:21,2:20:39.24:39,0,134	1/1:13,14:27:17.33:260,17,0	0/1:11,4:12:38.68:81,0,39	0/1:7,13:19:14.19:150,0,14	1/1:11,8:20:23.73:221,24,0	0/1:24,9:29:26.42:26,0,55	1/1:12,9:20:4.70:248,5,0	1/1:14,13:26:36.55:506,37,0	0/1:8,11:19:20.27:279,0,20	0/0:1,1:2:5.82:0,6,36
chr10	9007391	.	GA	G	2954.23	PASS	AB=0.866;AC=38;AF=0.679;AN=56;BaseQRankSum=-0.247;DP=552;FS=0.000;HRun=2;HaplotypeScore=219.9858;InbreedingCoeff=0.1262;MQ=32.69;MQ0=25;MQRankSum=1.144;QD=6.00;ReadPosRankSum=3.336;VQSLOD=0.6081;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:25,2:24:48.65:68,0,49	1/1:8,3:10:15.75:93,16,0	0/0:21,0:5:15.05:0,15,225	0/0:14,0:7:8.96:0,9,149	1/1:15,5:18:17.34:95,17,0	1/1:16,2:18:38.57:192,39,0	0/1:7,10:17:14.27:168,0,14	1/1:14,11:17:37.92:257,38,0	0/1:14,2:16:46.01:61,0,46	0/1:20,5:22:9.98:168,0,10	1/1:10,3:12:14.29:106,14,0	1/1:16,1:17:19.79:105,20,0	1/1:25,4:29:7.70:149,8,0	1/1:15,5:20:12.07:98,12,0	1/1:13,6:18:40.32:224,40,0	1/1:20,4:24:4.15:117,4,0	0/1:19,4:23:74.96:75,0,95	0/1:9,1:7:1.67:2,0,10	0/0:21,2:20:1.01:0,1,143	1/1:19,8:27:37.42:230,37,0	0/1:13,2:12:25.67:59,0,26	1/1:19,1:19:11.05:147,11,0	1/1:14,5:19:29.43:231,29,0	0/1:30,3:29:56.62:85,0,57	1/1:14,5:18:12.98:172,13,0	0/1:22,4:26:1.38:155,0,1	0/1:17,1:18:55.89:66,0,56	0/0:2,0:2:4.51:0,5,23
chr10	9007392	.	A	AAG	8345.64	PASS	AB=0.791;AC=43;AF=0.768;AN=56;BaseQRankSum=-1.900;DP=546;FS=2.417;HRun=0;HaplotypeScore=206.0419;InbreedingCoeff=0.2013;MQ=32.36;MQ0=25;MQRankSum=1.340;QD=16.36;ReadPosRankSum=3.523;VQSLOD=5.1144;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:17,10:24:25.62:319,26,0	1/1:8,3:10:14.78:133,15,0	0/0:21,0:5:15.05:0,15,221	0/0:13,0:7:10.92:0,11,138	1/1:9,11:18:13.67:182,14,0	1/1:5,13:18:51.39:507,51,0	0/1:13,4:17:4.17:274,0,4	1/1:22,2:17:33.89:261,34,0	0/1:8,7:15:9.68:183,0,10	1/1:16,9:22:1.28:490,1,0	1/1:4,9:12:30.86:271,31,0	1/1:2,15:17:50.09:509,50,0	1/1:13,16:29:61.04:680,61,0	1/1:5,11:19:48.40:483,48,0	1/1:10,8:17:45.40:443,45,0	1/1:9,15:24:48.04:603,48,0	0/1:20,3:23:78.08:132,0,78	1/1:9,1:7:1.97:41,2,0	0/1:20,2:20:80.12:80,0,130	1/1:13,14:27:53.93:438,54,0	0/1:12,3:12:14.33:139,0,14	1/1:7,13:19:39.28:375,39,0	1/1:9,9:18:42.48:308,42,0	0/1:24,9:29:40.98:109,0,41	1/1:9,9:17:16.46:326,16,0	1/1:13,14:26:12.97:669,13,0	0/1:7,11:18:44.24:391,0,44	0/0:1,1:2:2.97:0,3,9
chr10	9007393	.	A	AAGA	16514.74	PASS	AB=1.000;AC=48;AF=0.857;AN=56;BaseQRankSum=-4.417;DP=536;FS=0.594;HRun=0;HaplotypeScore=180.3699;InbreedingCoeff=0.3129;MQ=32.23;MQ0=25;MQRankSum=1.100;QD=32.77;ReadPosRankSum=2.572;VQSLOD=4.9361;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:21,4:23:24.99:602,25,0	1/1:10,0:9:21.05:299,21,0	0/0:21,0:5:15.05:0,15,264	0/0:11,0:7:11.42:0,11,136	1/1:20,0:18:20.89:409,21,0	1/1:18,0:18:54.03:923,54,0	1/1:16,0:16:9.33:596,9,0	1/1:24,0:16:42.08:585,42,0	1/1:15,0:15:13.78:421,14,0	1/1:25,0:22:25.35:941,25,0	1/1:13,0:12:33.11:561,33,0	1/1:17,0:17:48.16:916,48,0	1/1:29,0:29:60.67:1231,61,0	1/1:19,0:19:51.15:946,51,0	1/1:18,0:17:51.08:848,51,0	1/1:23,0:23:62.81:1105,63,0	0/1:22,0:22:22.50:367,0,23	1/1:10,0:7:5.81:79,6,0	0/1:23,0:20:88.04:240,0,88	1/1:26,0:26:51.24:899,51,0	1/1:15,0:12:0.17:236,0,0	1/1:20,0:19:50.31:741,50,0	1/1:18,0:18:48.02:673,48,0	0/1:33,0:29:12.92:221,0,13	1/1:18,0:17:35.73:715,36,0	1/1:26,0:25:19.03:1191,19,0	0/1:18,0:18:23.04:746,0,23	1/1:2,0:2:4.22:24,4,0
chr10	9007936	.	TCAGCCTTAGGTGGCTA	T	55602.04	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=9.351;DP=649;FS=1.984;HRun=0;HaplotypeScore=364.3788;InbreedingCoeff=0.9509;MQ=66.67;MQ0=0;MQRankSum=-10.848;QD=92.52;ReadPosRankSum=8.720;VQSLOD=3.3633;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:11,21:32:48.16:2149,48,0	1/1:1,9:10:24.08:1136,24,0	0/0:25,0:25:66.22:0,66,4359	0/0:23,0:23:66.23:0,66,3458	1/1:2,18:20:45.15:2025,45,0	1/1:2,16:18:39.13:1846,39,0	1/1:8,20:28:45.15:2097,45,0	1/1:13,18:31:51.17:2065,51,0	1/1:9,24:33:60.21:2839,60,0	1/1:5,19:24:57.18:2376,57,0	1/1:1,12:14:27.09:1276,27,0	1/1:7,24:31:63.22:2928,63,0	1/1:7,33:40:87.30:4117,87,0	1/1:5,31:36:90.31:4206,90,0	1/1:8,31:39:78.27:3691,78,0	1/1:7,36:43:99:4685,99,0	1/1:8,8:16:15.05:710,15,0	1/1:1,8:9:24.08:1136,24,0	1/1:3,5:8:15.05:617,15,0	1/1:1,15:16:45.15:2129,45,0	1/1:7,9:16:15.05:710,15,0	1/1:7,20:27:57.20:2695,57,0	1/1:2,7:9:15.05:710,15,0	1/1:6,16:22:33.11:1562,33,0	1/1:2,15:17:45.15:2079,45,0	1/1:4,23:27:66.20:2908,66,0	1/1:7,22:29:51.18:2413,51,0	1/1:0,6:6:12.04:499,12,0
chr10	9008147	.	A	AG	35725.83	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-6.755;DP=887;FS=7.238;HRun=0;HaplotypeScore=91.2920;InbreedingCoeff=0.9917;MQ=85.00;MQ0=0;MQRankSum=-12.336;QD=43.57;ReadPosRankSum=6.424;VQSLOD=4.4935;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,62:63:99:2825,178,0	1/1:0,12:12:33.11:527,33,0	0/0:37,0:37:99:0,104,1367	0/0:30,0:30:78.61:0,79,1124	1/1:0,26:26:75.26:1197,75,0	1/1:0,27:27:72.25:1150,72,0	1/1:1,33:34:93.32:1486,93,0	1/1:2,37:39:99:1720,111,0	1/1:0,33:33:99:1581,99,0	1/1:2,39:41:99:1886,120,0	1/1:1,15:16:39.13:623,39,0	1/1:1,36:37:99:1629,102,0	1/1:3,40:43:96.33:1529,96,0	1/1:0,38:38:99:1663,105,0	1/1:0,39:39:99:1757,111,0	1/1:2,38:40:99:1811,114,0	1/1:1,34:35:96.33:1535,96,0	1/1:1,20:21:54.18:862,54,0	1/1:2,22:24:72.25:1145,72,0	1/1:0,22:22:60.20:958,60,0	1/1:2,43:45:99:2084,132,0	1/1:2,28:30:81.27:1289,81,0	1/1:0,26:26:66.23:1054,66,0	1/1:1,28:29:75.26:1197,75,0	1/1:1,38:39:99:1630,102,0	1/1:0,26:26:78.27:1246,78,0	1/1:2,26:28:69.24:1102,69,0	1/1:0,7:7:15.05:240,15,0
chr10	9008301	.	T	TCTC	38182.51	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=3.417;DP=780;FS=0.582;HRun=0;HaplotypeScore=164.2796;InbreedingCoeff=0.9705;MQ=81.12;MQ0=0;MQRankSum=-10.944;QD=52.16;ReadPosRankSum=6.845;VQSLOD=6.1384;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,43:46:99:2629,120,0	1/1:0,12:12:33.04:694,33,0	0/0:23,0:23:56.95:0,57,793	0/0:25,0:25:72.13:0,72,1109	1/1:0,22:23:45.15:1062,45,0	1/1:1,22:26:63.15:1398,63,0	1/1:2,24:27:48.16:1099,48,0	1/1:3,29:33:90.24:1869,90,0	1/1:1,44:47:99:2511,111,0	1/1:0,35:37:90.17:1884,90,0	1/1:0,18:18:36.12:809,36,0	1/1:1,33:35:66.16:1491,66,0	1/1:2,24:26:60.14:1383,60,0	1/1:0,31:31:77.87:1773,78,0	1/1:0,38:40:99:2324,102,0	1/1:4,28:32:93.18:2058,93,0	1/1:0,21:22:42.14:991,42,0	1/1:0,26:27:66.18:1508,66,0	1/1:0,20:22:66.16:1415,66,0	1/1:0,21:22:51.17:1106,51,0	1/1:1,42:43:96.28:2190,96,0	1/1:1,25:28:48.10:1045,48,0	1/1:0,15:16:36.12:848,36,0	1/1:1,27:31:60.21:1418,60,0	1/1:1,27:31:66.23:1525,66,0	1/1:1,26:28:81.21:1705,81,0	1/1:1,22:24:57.15:1236,57,0	1/1:0,4:5:9.03:213,9,0
chr10	9008498	.	GAA	G	19437.07	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=5.420;DP=661;FS=3.047;HRun=8;HaplotypeScore=216.6800;InbreedingCoeff=0.9885;MQ=70.64;MQ0=0;MQRankSum=-7.576;QD=30.56;ReadPosRankSum=4.719;VQSLOD=2.6614;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,25:29:69.20:841,69,0	1/1:0,12:12:33.10:402,33,0	0/0:12,0:12:21.87:0,22,314	0/0:13,0:13:33.07:0,33,485	1/1:6,37:43:99:1280,105,0	1/1:0,20:20:60.19:731,60,0	1/1:1,9:10:24.07:292,24,0	1/1:5,16:21:48.10:558,48,0	1/1:1,24:25:69.21:841,69,0	1/1:4,42:46:99:1485,123,0	1/1:1,26:27:72.22:877,72,0	1/1:0,12:12:33.10:402,33,0	1/1:2,25:27:75.23:914,75,0	1/1:0,31:31:87.27:1060,87,0	1/1:2,25:27:66.20:804,66,0	1/1:2,30:32:87.21:1042,87,0	1/1:2,21:23:54.17:657,54,0	1/1:0,12:12:33.10:402,33,0	1/1:2,12:14:36.08:415,36,0	1/1:5,31:36:84.24:1024,84,0	1/1:1,20:21:45.13:549,45,0	1/1:4,26:30:72.22:877,72,0	1/1:6,31:37:90.26:1096,90,0	1/1:2,16:18:45.14:549,45,0	1/1:2,23:25:63.19:768,63,0	1/1:4,26:30:72.22:878,72,0	1/1:6,15:21:42.12:511,42,0	1/1:2,5:7:15.04:183,15,0
chr10	9009016	.	AAAACTCATC	A	13046.73	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=8.056;DP=523;FS=8.768;HRun=0;HaplotypeScore=201.5644;InbreedingCoeff=0.9716;MQ=77.11;MQ0=0;MQRankSum=-15.422;QD=83.10;ReadPosRankSum=0.387;VQSLOD=4.2970;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,11:11:30.10:919,30,0	0/0:13,0:13:39.13:0,39,1772	0/0:16,0:16:13.77:0,14,1130	0/0:14,0:14:29.80:0,30,671	1/1:1,9:10:21.07:645,21,0	1/1:1,12:13:36.12:1067,36,0	1/1:0,12:12:30.10:950,30,0	0/0:37,0:37:99:0,108,5225	0/0:30,0:30:90.31:0,90,3711	1/1:0,13:13:36.12:1172,36,0	1/1:0,9:9:27.09:820,27,0	0/0:26,0:26:78.27:0,78,3595	0/0:37,0:37:99:0,108,5222	0/0:32,0:32:93.32:0,93,4483	1/1:0,27:27:78.27:2341,78,0	1/1:0,29:29:78.27:2511,78,0	0/0:27,0:27:81.28:0,81,3961	1/1:1,6:7:18.06:560,18,0	0/0:17,0:17:51.18:0,51,2088	0/0:15,0:15:45.15:0,45,2099	0/0:31,0:31:93.29:0,93,3617	0/0:9,0:9:27.09:0,27,1367	1/1:0,8:8:21.07:654,21,0	1/1:0,6:6:9.03:293,9,0	1/1:0,12:12:36.12:1116,36,0	0/0:18,0:18:54.19:0,54,2438	0/0:41,0:41:99:0,123,5914	0/0:3,0:3:6.02:0,6,303
chr10	9009105	.	G	GA	16219.72	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=5.730;DP=549;FS=1.663;HRun=6;HaplotypeScore=157.9310;InbreedingCoeff=0.9145;MQ=74.03;MQ0=0;MQRankSum=-8.418;QD=31.49;ReadPosRankSum=3.538;VQSLOD=2.6251;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,18:22:45.06:530,45,0	1/1:2,15:17:42.13:528,42,0	0/0:18,0:18:38.90:0,39,374	0/0:16,0:16:36.04:0,36,355	1/1:4,18:22:54.09:638,54,0	1/1:0,24:24:72.23:904,72,0	1/1:4,12:16:33.11:415,33,0	1/1:7,27:34:81.26:1019,81,0	1/1:5,12:17:42.05:493,42,0	1/1:7,13:20:48.15:592,48,0	1/1:6,15:21:54.04:623,54,0	1/1:4,25:29:78.22:964,78,0	1/1:3,19:22:54.17:679,54,0	1/1:3,20:23:66.17:812,66,0	1/1:0,15:15:45.10:548,45,0	1/1:4,22:26:66.21:830,66,0	1/1:1,15:15:45.14:566,45,0	1/1:0,7:7:21.07:264,21,0	1/1:6,15:21:54.17:677,54,0	1/1:9,18:27:72.13:846,72,0	1/1:5,21:26:63.16:775,63,0	1/1:4,12:16:41.99:451,42,0	1/1:3,9:12:36.05:412,36,0	1/1:0,15:15:42.13:528,42,0	1/1:2,20:22:63.12:757,63,0	1/1:5,20:25:63.19:782,63,0	1/1:5,14:19:45.12:550,45,0	1/1:0,1:1:3.01:38,3,0
chr10	9009196	.	GC	G	18742.97	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=11.175;DP=552;FS=24.348;HRun=1;HaplotypeScore=168.2736;InbreedingCoeff=0.9440;MQ=94.93;MQ0=0;MQRankSum=-12.589;QD=38.17;ReadPosRankSum=6.849;VQSLOD=2.0155;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,19:19:48.16:671,48,0	1/1:0,11:11:30.10:419,30,0	0/0:30,0:30:90.28:0,90,1391	0/0:31,0:31:90.28:0,90,1367	1/1:0,22:22:51.17:712,51,0	1/1:0,20:20:57.19:796,57,0	1/1:0,11:11:33.11:461,33,0	1/1:0,17:17:51.17:712,51,0	1/1:0,27:27:78.26:1089,78,0	1/1:0,30:30:90.30:1253,90,0	1/1:0,25:25:72.24:1007,72,0	1/1:0,21:21:57.19:796,57,0	1/1:0,22:22:60.20:839,60,0	1/1:0,29:29:78.26:1089,78,0	1/1:0,16:16:42.14:586,42,0	1/1:0,20:20:51.17:712,51,0	1/1:0,16:16:45.15:629,45,0	1/1:0,7:7:18.06:251,18,0	1/1:0,11:11:30.10:419,30,0	1/1:0,22:22:66.22:922,66,0	1/1:0,17:17:39.13:545,39,0	1/1:0,20:20:57.19:796,57,0	1/1:0,24:24:63.21:880,63,0	1/1:0,16:16:36.12:503,36,0	1/1:0,15:15:42.14:587,42,0	1/1:0,27:27:78.21:1036,78,0	1/1:0,24:24:68.97:953,69,0	1/1:0,2:2:6.02:80,6,0
chr10	9010136	.	CA	C	9165	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=17.125;DP=669;FS=9.212;HRun=5;HaplotypeScore=108.6428;InbreedingCoeff=0.9742;MQ=76.51;MQ0=0;MQRankSum=-1.360;QD=30.96;ReadPosRankSum=2.811;VQSLOD=4.3530;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:75.25:0,75,1024	1/1:0,6:6:18.05:204,18,0	0/0:14,0:13:32.87:0,33,368	0/0:16,0:16:39.09:0,39,478	0/0:28,0:28:78.23:0,78,1034	0/0:24,0:24:66.21:0,66,888	0/0:10,0:10:30.10:0,30,410	1/1:1,31:32:93.24:1037,93,0	0/0:29,0:29:78.26:0,78,1067	0/0:38,0:38:99:0,105,1385	0/0:19,0:19:54.18:0,54,732	1/1:2,27:29:81.23:919,81,0	1/1:2,25:27:75.21:850,75,0	1/1:0,35:35:93.27:1055,93,0	0/0:31,0:31:93.29:0,93,1242	0/0:30,0:30:84.24:0,84,1102	1/1:1,23:24:66.19:748,66,0	0/0:9,0:9:27.09:0,27,369	1/1:3,19:22:57.13:629,57,0	1/1:1,28:29:81.23:913,81,0	0/0:30,0:30:87.25:0,87,1143	1/1:1,19:20:48.13:540,48,0	0/0:23,0:23:57.18:0,57,763	0/0:18,0:18:45.15:0,45,616	0/0:29,0:29:75.25:0,75,1023	1/1:1,32:33:96.26:1080,96,0	1/1:3,35:38:99:1156,102,0	1/1:0,1:1:3.01:34,3,0
chr10	9010385	.	GA	G	8184.85	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-0.607;DP=625;FS=1.802;HRun=3;HaplotypeScore=182.9298;InbreedingCoeff=0.9851;MQ=60.21;MQ0=1;MQRankSum=-7.001;QD=34.39;ReadPosRankSum=0.836;VQSLOD=3.7584;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:96.32:0,96,1381	1/1:0,8:8:24.08:297,24,0	0/0:15,0:13:12.47:0,12,296	0/0:17,0:13:35.57:0,36,455	0/0:39,0:39:99:0,105,1488	0/0:28,0:28:72.22:0,72,1016	0/0:22,0:22:63.07:0,63,817	1/1:0,23:23:66.17:800,66,0	0/0:26,0:26:69.23:0,69,993	0/0:25,0:25:69.23:0,69,988	0/0:21,0:21:54.14:0,54,754	1/1:0,25:25:66.21:817,66,0	1/1:0,25:25:75.24:928,75,0	1/1:0,20:20:57.18:705,57,0	0/0:38,0:37:99:0,108,1535	0/0:24,0:24:69.20:0,69,970	1/1:1,17:17:45.14:557,45,0	0/0:3,0:3:9.03:0,9,130	1/1:1,12:13:36.11:446,36,0	1/1:0,23:22:66.21:817,66,0	0/0:29,0:29:87.29:0,87,1253	1/1:0,22:22:63.20:780,63,0	0/0:25,0:25:72.23:0,72,1018	0/0:10,0:10:18.06:0,18,258	0/0:30,0:30:69.20:0,69,970	1/1:1,22:22:22.99:737,23,0	1/1:2,30:32:87.27:1076,87,0	1/1:0,6:6:18.06:223,18,0
chr10	9010933	.	G	GAAC	3794.92	PASS	AC=28;AF=0.875;AN=32;BaseQRankSum=2.215;DP=136;FS=31.034;HRun=0;HaplotypeScore=38.7935;InbreedingCoeff=0.6240;MQ=23.86;MQ0=6;MQRankSum=1.349;QD=39.95;ReadPosRankSum=3.980;VQSLOD=2.2534;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,3:3:6.02:134,6,0	./.	0/0:8,0:4:8.98:0,9,122	0/0:22,0:9:24.05:0,24,370	1/1:1,3:2:3.01:67,3,0	1/1:0,6:5:15.05:318,15,0	./.	./.	1/1:1,5:5:12.04:267,12,0	1/1:2,7:4:9.03:201,9,0	./.	1/1:1,4:4:9.03:200,9,0	1/1:0,11:9:24.08:536,24,0	1/1:0,3:3:9.03:201,9,0	1/1:3,8:11:24.08:523,24,0	1/1:1,9:9:24.08:535,24,0	./.	./.	./.	1/1:0,2:1:3.01:69,3,0	./.	./.	./.	./.	1/1:0,5:6:6.02:136,6,0	1/1:0,7:5:15.05:338,15,0	1/1:2,9:8:12.04:269,12,0	./.
chr10	9011051	.	GAC	G	2319.30	PASS	AC=24;AF=0.857;AN=28;BaseQRankSum=3.656;DP=205;FS=7.864;HRun=0;HaplotypeScore=58.6995;InbreedingCoeff=0.6039;MQ=22.28;MQ0=29;MQRankSum=-2.179;QD=16.93;ReadPosRankSum=2.967;VQSLOD=2.4592;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,1:2:3.01:41,3,0	1/1:0,8:7:18.06:246,18,0	0/0:30,0:3:9.03:0,9,154	0/0:27,0:2:6.02:0,6,96	1/1:0,10:9:9.03:123,9,0	./.	1/1:0,2:1:3.01:41,3,0	./.	./.	1/1:2,8:9:21.07:287,21,0	1/1:1,19:12:24.08:323,24,0	./.	./.	./.	./.	./.	./.	./.	./.	1/1:1,12:10:12.04:164,12,0	./.	1/1:0,21:15:27.09:367,27,0	1/1:5,19:19:24.08:326,24,0	./.	1/1:1,18:15:27.09:368,27,0	1/1:1,4:3:8.96:97,9,0	./.	1/1:0,2:2:3.01:41,3,0
chr10	9011505	.	AAAAAGAAAAGAAAAG	A	20197.95	PASS	AB=0.795;AC=48;AF=0.889;AN=54;BaseQRankSum=0.218;DP=467;FS=13.898;HRun=0;HaplotypeScore=191.7397;InbreedingCoeff=0.4828;MQ=44.29;MQ0=9;MQRankSum=-1.259;QD=49.87;ReadPosRankSum=5.199;VQSLOD=3.1192;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:12,5:17:76.45:420,0,76	1/1:2,3:5:9.03:372,9,0	0/0:22,0:6:9.92:0,10,374	0/0:37,0:15:25.38:0,25,658	1/1:3,16:19:30.10:986,30,0	1/1:8,10:18:21.07:883,21,0	1/1:5,9:13:9.03:375,9,0	1/1:19,0:18:5.65:81,6,0	1/1:2,9:11:18.06:759,18,0	1/1:6,17:22:45.11:1448,45,0	1/1:5,17:22:33.07:1249,33,0	1/1:4,13:17:27.09:1082,27,0	1/1:4,13:16:24.08:1012,24,0	1/1:7,20:27:39.13:1645,39,0	1/1:5,14:16:27.09:1131,27,0	1/1:9,13:21:24.08:960,24,0	1/1:7,9:16:12:400,12,0	0/1:7,2:9:35.40:238,0,35	1/1:5,4:8:12.03:268,12,0	1/1:7,22:29:51.17:1617,51,0	1/1:7,1:8:9.01:209,9,0	1/1:1,8:9:12.04:506,12,0	1/1:2,13:15:33.03:1392,33,0	1/1:6,0:5:5.96:43,6,0	1/1:6,13:19:21.07:832,21,0	1/1:5,19:24:54.16:1784,54,0	1/1:5,6:11:12.04:506,12,0	./.
chr10	9011856	.	G	GAGAC	31238.93	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-0.793;DP=790;FS=0.000;HRun=0;HaplotypeScore=164.7758;InbreedingCoeff=0.9950;MQ=58.52;MQ0=1;MQRankSum=-4.150;QD=43.03;ReadPosRankSum=5.312;VQSLOD=4.8087;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:23:38.94:736,39,0	1/1:3,8:11:18.06:448,18,0	0/0:28,0:25:39:0,39,595	0/0:34,0:30:55.19:0,55,791	1/1:41,0:41:84.29:1627,84,0	1/1:32,0:32:57.20:1097,57,0	1/1:19,0:19:39.13:744,39,0	1/1:19,22:44:84.24:1760,84,0	1/1:6,22:28:54.66:1349,55,0	1/1:39,0:39:99:1760,99,0	1/1:27,0:27:51.17:1026,51,0	1/1:10,17:27:51.18:1273,51,0	1/1:3,15:19:33.11:823,33,0	1/1:10,17:29:45.15:1118,45,0	1/1:26,0:26:60.21:1126,60,0	1/1:31,0:31:66.23:1257,66,0	1/1:8,20:28:51.18:1252,51,0	1/1:20,0:20:53.21:986,53,0	1/1:12,7:21:31.32:585,31,0	1/1:6,36:43:96.33:2393,96,0	1/1:8,17:26:33.11:824,33,0	1/1:3,16:21:45.15:1122,45,0	1/1:24,0:24:48.16:957,48,0	1/1:15,1:16:30.10:588,30,0	1/1:34,0:34:60.21:1190,60,0	1/1:8,27:37:84.27:1996,84,0	1/1:9,33:43:93.32:2304,93,0	1/1:1,13:16:36.12:898,36,0
chr10	9011860	.	C	CAGAG	30077.25	PASS	AB=0.997;AC=43;AF=0.768;AN=56;BaseQRankSum=-2.045;DP=825;FS=4.850;HRun=0;HaplotypeScore=168.0538;InbreedingCoeff=0.1203;MQ=59.76;MQ0=1;MQRankSum=-3.933;QD=39.73;ReadPosRankSum=13.586;VQSLOD=3.1734;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:5,21:29:38.94:1052,39,0	0/1:12,0:12:3.92:288,0,4	0/0:30,0:27:69.08:0,69,1002	0/0:38,0:33:55.40:0,55,1008	1/1:0,42:46:84.25:2262,84,0	1/1:0,31:31:57.20:1535,57,0	1/1:0,18:19:39.13:1051,39,0	0/1:49,0:49:99:1042,0,315	0/1:30,0:30:24.54:876,0,25	1/1:1,39:42:99:2730,114,0	1/1:0,28:30:51.18:1369,51,0	0/1:27,0:27:13.78:798,0,14	1/1:18,0:18:12.13:544,12,0	0/1:28,0:28:58.78:716,0,59	1/1:2,24:26:60.21:1618,60,0	1/1:4,29:35:66.23:1778,66,0	0/1:28,0:28:27.77:813,0,28	1/1:1,19:20:34.21:1347,34,0	0/1:20,0:20:99:285,0,166	1/1:47,0:47:12.38:1620,12,0	0/1:25,0:25:5.86:520,0,6	1/1:22,0:22:23.17:760,23,0	1/1:1,24:25:48.04:1287,48,0	1/1:3,16:19:30.10:779,30,0	1/1:4,31:35:60.21:1613,60,0	0/1:35,1:36:71.71:1241,0,72	1/1:41,0:40:35.35:1533,35,0	1/1:17,0:17:26.53:623,27,0
chr10	9013342	.	A	AGTG	27733.85	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=9.482;DP=685;FS=1.238;HRun=0;HaplotypeScore=355.0843;InbreedingCoeff=0.9492;MQ=65.72;MQ0=0;MQRankSum=-10.162;QD=43.61;ReadPosRankSum=6.253;VQSLOD=4.0918;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,22:32:66.16:1150,66,0	1/1:3,6:9:21.07:366,21,0	0/0:25,0:24:72.23:0,72,1189	0/0:24,0:24:51.17:0,51,867	1/1:5,24:29:58.84:918,59,0	1/1:2,17:19:54.18:952,54,0	1/1:4,10:14:35.95:525,36,0	1/1:9,14:23:65.83:955,66,0	1/1:12,25:37:92.97:1457,93,0	1/1:6,35:41:99:2038,119,0	1/1:5,19:24:57.02:935,57,0	1/1:5,32:37:99:1805,108,0	1/1:10,25:36:99:1569,99,0	1/1:5,36:41:99:1922,114,0	1/1:3,31:34:99:1693,99,0	1/1:2,27:29:84.22:1470,84,0	1/1:2,5:7:20.95:305,21,0	1/1:2,4:6:12.04:223,12,0	1/1:6,15:21:60.02:951,60,0	1/1:5,26:31:81.25:1411,81,0	1/1:2,7:9:21.07:367,21,0	1/1:4,18:22:54.18:933,54,0	1/1:4,21:25:57.20:1015,57,0	1/1:7,15:22:24.49:513,24,0	1/1:4,24:28:78.11:1329,78,0	1/1:5,21:26:78.13:1306,78,0	1/1:6,25:31:87.17:1461,87,0	1/1:0,3:3:9.03:165,9,0
chr10	9013344	.	A	AGCT	31122.63	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=11.820;DP=772;FS=13.117;HRun=0;HaplotypeScore=431.8954;InbreedingCoeff=0.8292;MQ=62.77;MQ0=0;MQRankSum=-10.912;QD=43.11;ReadPosRankSum=10.251;VQSLOD=2.7660;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:16,22:38:89.12:1570,89,0	1/1:4,6:10:17.14:371,17,0	0/0:25,0:24:72.03:0,72,1194	0/0:25,0:25:66.13:0,66,1024	1/1:8,24:32:61.87:997,62,0	1/1:5,17:22:53.09:975,53,0	1/1:6,10:16:4.72:604,5,0	1/1:23,14:37:87.62:1666,88,0	1/1:12,25:37:35.72:1402,36,0	1/1:17,35:52:99:2487,116,0	1/1:9,19:28:23.37:959,23,0	1/1:9,32:41:92.81:1945,93,0	1/1:13,26:39:77.61:1541,78,0	1/1:10,36:46:99:2128,104,0	1/1:3,31:34:79.43:1686,79,0	1/1:7,27:34:97.08:1645,97,0	1/1:3,5:8:4.19:357,4,0	1/1:1,4:5:12.04:223,12,0	1/1:9,15:24:28.56:1127,29,0	1/1:8,26:34:67.34:1510,67,0	1/1:5,7:12:30.10:519,30,0	1/1:6,18:24:60.16:1022,60,0	1/1:6,21:27:66.23:1168,66,0	1/1:10,15:25:17.63:707,18,0	1/1:3,24:27:55.82:1274,56,0	1/1:11,21:32:54.36:1512,54,0	1/1:8,25:34:77.32:1560,77,0	1/1:1,3:4:9.03:165,9,0
chr10	9013360	.	G	GA	24772.59	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=9.854;DP=745;FS=1.116;HRun=1;HaplotypeScore=380.5456;InbreedingCoeff=0.9766;MQ=65.47;MQ0=0;MQRankSum=-11.177;QD=36.11;ReadPosRankSum=5.862;VQSLOD=2.7649;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,32:37:78.22:1133,78,0	1/1:1,6:7:15.05:224,15,0	0/0:31,0:30:86.71:0,87,1042	0/0:28,0:28:69.13:0,69,842	1/1:1,31:32:75.62:951,76,0	1/1:1,23:24:63.18:917,63,0	1/1:3,14:17:36.12:537,36,0	1/1:3,37:40:99:1637,111,0	1/1:3,25:28:69.19:1005,69,0	1/1:5,45:50:99:2016,144,0	1/1:2,21:23:60.12:845,60,0	1/1:2,31:33:90.26:1319,90,0	1/1:3,24:27:75.21:1094,75,0	1/1:4,35:39:99:1493,105,0	1/1:2,28:30:84.28:1253,84,0	1/1:4,31:35:90.24:1296,90,0	1/1:0,12:12:27.09:398,27,0	1/1:1,7:8:18.06:269,18,0	1/1:1,21:22:63.18:913,63,0	1/1:5,29:33:84.16:1179,84,0	1/1:1,9:10:15.05:224,15,0	1/1:3,20:23:51.04:687,51,0	1/1:1,28:29:72.16:1026,72,0	1/1:4,17:21:20.14:317,20,0	1/1:2,31:33:84.16:1181,84,0	1/1:1,28:29:84.27:1232,84,0	1/1:1,30:31:84.21:1206,84,0	1/1:0,12:12:30.05:423,30,0
chr10	9014273	.	AT	A	28387.96	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-0.297;DP=760;FS=26.564;HRun=6;HaplotypeScore=126.5366;InbreedingCoeff=0.9976;MQ=76.06;MQ0=0;MQRankSum=-8.647;QD=38.78;ReadPosRankSum=5.656;VQSLOD=2.6658;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,32:32:90.30:1258,90,0	1/1:0,12:12:36.12:503,36,0	0/0:16,0:16:37.13:0,37,659	0/0:12,0:12:32.84:0,33,418	1/1:0,38:38:99:1403,102,0	1/1:0,35:35:99:1427,102,0	1/1:0,19:19:51.17:713,51,0	1/1:0,37:37:99:1529,111,0	1/1:0,33:33:96.32:1343,96,0	1/1:0,37:37:99:1503,108,0	1/1:0,15:15:42.14:587,42,0	1/1:0,28:28:72.24:1007,72,0	1/1:0,34:34:96.32:1341,96,0	1/1:0,25:25:63.21:881,63,0	1/1:0,42:42:99:1594,114,0	1/1:0,38:38:99:1468,105,0	1/1:1,24:25:65.43:876,65,0	1/1:0,13:13:39.13:545,39,0	1/1:0,23:23:66.20:903,66,0	1/1:0,41:41:99:1621,117,0	1/1:0,17:17:45.15:616,45,0	1/1:0,30:30:84.28:1169,84,0	1/1:0,19:19:51.17:713,51,0	1/1:0,20:20:51.17:713,51,0	1/1:1,29:30:78.07:1090,78,0	1/1:0,47:47:99:1908,138,0	1/1:0,35:35:99:1384,99,0	1/1:0,7:7:21.07:294,21,0
chr10	9014312	.	TTTACACTA	T	241.24	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=0.673;DP=802;FS=1.677;HRun=0;HaplotypeScore=296.4269;InbreedingCoeff=0.9758;MQ=90.97;MQ0=0;MQRankSum=-3.521;QD=34.46;ReadPosRankSum=-0.983;VQSLOD=2.7143;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:81.28:0,81,3582	0/0:12,0:12:36.12:0,36,1657	0/0:35,0:35:99:0,105,4438	0/0:32,0:32:96.30:0,96,3958	0/0:27,0:27:78.26:0,78,3367	0/0:33,0:33:96.33:0,96,4269	0/0:24,0:24:69.24:0,69,3035	0/0:39,0:39:99:0,111,4658	0/0:37,0:37:99:0,108,4959	0/0:32,0:32:96.33:0,96,4338	0/0:21,0:21:63.22:0,63,2712	0/0:32,0:32:84.27:0,84,3657	0/0:36,0:36:99:0,105,4747	0/0:30,0:30:81.25:0,81,3521	0/0:46,0:46:99:0,132,5836	0/0:32,0:32:87.30:0,87,3879	0/0:30,0:30:81.28:0,81,3574	0/0:12,0:12:36.06:0,36,1349	0/0:20,0:20:60.21:0,60,2493	0/0:37,0:37:99:0,111,4689	1/1:1,6:7:15.03:330,15,0	0/0:31,0:31:93.31:0,93,4122	0/0:24,0:24:66.23:0,66,2949	0/0:25,0:25:66.23:0,66,2897	0/0:33,0:33:87.29:0,87,3897	0/0:38,0:38:99:0,114,4936	0/0:43,0:43:99:0,129,5882	0/0:6,0:6:18.03:0,18,606
chr10	9014896	.	TAC	T	6606.03	PASS	AB=0.704;AC=47;AF=0.839;AN=56;BaseQRankSum=-3.356;DP=520;FS=3.860;HRun=0;HaplotypeScore=75.1803;InbreedingCoeff=0.3918;MQ=67.95;MQ0=7;MQRankSum=0.639;QD=14.55;ReadPosRankSum=5.847;VQSLOD=4.4969;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:18:21.02:257,21,0	1/1:12,0:12:28.57:321,29,0	0/0:26,0:5:15.03:0,15,188	0/1:35,0:13:7.65:8,0,78	0/0:4,11:15:0:0,0,0	1/1:1,14:15:2.99:23,3,0	1/1:1,15:16:2.97:20,3,0	1/1:1,22:24:66.22:866,66,0	1/1:11,0:11:1.59:122,2,0	1/1:5,14:19:36.12:465,36,0	1/1:5,12:17:6:75,6,0	0/1:3,17:20:0.81:36,0,1	1/1:17,0:17:47.46:629,47,0	0/0:3,22:25:2.22:0,2,7	1/1:2,13:15:11.92:142,12,0	1/1:15,0:15:22.89:277,23,0	1/1:20,2:22:51.58:609,52,0	1/1:22,2:24:24.39:241,24,0	1/1:2,9:11:27.09:345,27,0	1/1:15,0:15:30.51:359,31,0	1/1:17,0:17:21:236,21,0	1/1:1,13:14:0.59:2,1,0	1/1:1,13:14:5.54:81,6,0	1/1:3,29:32:21.06:263,21,0	1/1:19,0:19:17.43:181,17,0	1/1:6,15:21:41.74:524,42,0	1/1:19,0:19:38.26:501,38,0	0/1:3,9:12:1.82:25,0,2
chr10	9015571	.	CAATTTT	C	13214.90	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=3.318;DP=597;FS=1.445;HRun=0;HaplotypeScore=197.5507;InbreedingCoeff=0.9953;MQ=73.47;MQ0=0;MQRankSum=-16.998;QD=49.31;ReadPosRankSum=-1.585;VQSLOD=4.7416;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:75.26:0,75,2491	1/1:2,16:18:48.06:981,48,0	0/0:14,0:14:33.09:0,33,829	0/0:17,0:17:36.08:0,36,916	0/0:31,0:31:87.30:0,87,2944	0/0:24,0:24:72.25:0,72,2420	0/0:12,0:12:33.11:0,33,1133	1/1:6,25:31:60.06:1093,60,0	0/0:25,0:25:72.25:0,72,2455	0/0:28,0:28:81.24:0,81,2607	0/0:20,0:20:54.18:0,54,1731	1/1:3,33:36:93.32:2044,93,0	1/1:1,19:20:48.16:1070,48,0	1/1:4,17:21:42.14:907,42,0	0/0:27,0:27:72.24:0,72,2371	0/0:21,0:21:51.18:0,51,1737	1/1:0,12:12:27.09:602,27,0	0/0:13,0:13:33.07:0,33,1017	1/1:5,20:25:57.15:1161,57,0	1/1:3,24:27:75.26:1641,75,0	0/0:11,0:11:27.09:0,27,927	1/1:1,23:24:69.04:1405,69,0	0/0:13,0:13:39.11:0,39,1243	0/0:14,0:14:36.12:0,36,1236	0/0:32,0:32:87.28:0,87,2810	1/1:3,18:21:54:1060,54,0	1/1:4,21:25:48.16:1006,48,0	1/1:2,6:8:12.04:244,12,0
chr10	9016073	.	A	AGCTGTAAGAG	59529.29	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-9.837;DP=591;FS=1.290;HRun=0;HaplotypeScore=115.8114;InbreedingCoeff=0.8769;MQ=76.95;MQ0=0;MQRankSum=-10.552;QD=108.63;ReadPosRankSum=5.697;VQSLOD=5.4077;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,19:25:54.12:2754,54,0	1/1:0,10:10:27.01:1328,27,0	0/0:20,0:20:57.17:0,57,1552	0/0:23,0:23:65.91:0,66,1713	1/1:0,24:30:69.17:3410,69,0	1/1:1,17:26:48.16:2621,48,0	1/1:1,4:11:15.05:819,15,0	1/1:0,13:35:99:4260,105,0	1/1:1,12:17:33.11:1801,33,0	1/1:0,14:21:61.02:2769,61,0	1/1:0,10:13:33.03:1652,33,0	1/1:1,18:23:51.17:2784,51,0	1/1:0,19:26:57.20:3106,57,0	1/1:1,20:30:60.21:3265,60,0	1/1:0,27:32:75.26:4090,75,0	1/1:2,14:21:39.13:2129,39,0	1/1:0,12:18:36.06:1813,36,0	1/1:0,4:6:11.89:657,12,0	1/1:1,6:16:48.12:1851,48,0	1/1:0,28:39:83.86:3708,84,0	1/1:1,2:9:6.02:327,6,0	1/1:0,12:19:41.97:1997,42,0	1/1:0,13:19:39.13:2125,39,0	1/1:0,10:14:17.89:981,18,0	1/1:2,19:29:54.19:2855,54,0	1/1:0,14:24:65.85:2659,66,0	1/1:1,23:31:63.22:3440,63,0	1/1:0,2:4:6.02:328,6,0
chr10	9016689	.	CAA	C	16432.58	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=9.072;DP=632;FS=24.086;HRun=9;HaplotypeScore=223.1995;InbreedingCoeff=0.9809;MQ=77.55;MQ0=0;MQRankSum=-9.512;QD=28.19;ReadPosRankSum=5.326;VQSLOD=2.1380;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,16:21:45.12:524,45,0	1/1:0,8:8:24.07:278,24,0	0/0:20,0:21:38.48:0,38,552	0/0:28,0:28:63.11:0,63,949	1/1:4,23:27:63.16:733,63,0	1/1:2,26:28:69.19:798,69,0	1/1:2,19:21:57.14:660,57,0	1/1:15,37:51:99:1217,105,0	1/1:6,15:21:45.05:524,45,0	1/1:3,23:26:69.13:804,69,0	1/1:6,18:24:57.10:658,57,0	1/1:0,23:23:66.20:767,66,0	1/1:1,23:24:69.20:800,69,0	1/1:2,29:31:87.23:1009,87,0	1/1:1,21:22:63.18:732,63,0	1/1:2,14:16:42.12:488,42,0	1/1:1,20:21:57.15:662,57,0	1/1:3,7:10:21.05:245,21,0	1/1:7,19:26:57.04:664,57,0	1/1:4,20:24:60.10:693,60,0	1/1:7,16:23:48.06:550,48,0	1/1:2,14:16:42.06:487,42,0	1/1:8,18:26:54.06:628,54,0	1/1:5,12:17:29.63:348,30,0	1/1:8,15:23:45.06:522,45,0	1/1:3,23:26:69.15:804,69,0	1/1:2,20:22:60.14:699,60,0	1/1:1,4:5:12.04:140,12,0
chr10	9017107	.	GT	G	9445.21	PASS	AB=0.560;AC=50;AF=0.893;AN=56;BaseQRankSum=9.838;DP=497;FS=1.056;HRun=1;HaplotypeScore=163.1069;InbreedingCoeff=0.6286;MQ=72.84;MQ0=0;MQRankSum=-8.662;QD=21.32;ReadPosRankSum=9.926;VQSLOD=4.0921;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,11:16:19.34:210,19,0	1/1:1,12:13:30.95:359,31,0	0/0:25,0:25:67.75:0,68,946	0/0:29,0:28:75.45:0,75,1119	1/1:5,16:26:13.42:322,13,0	1/1:4,18:22:44.23:420,44,0	0/1:3,10:13:1.66:122,0,2	1/1:0,13:12:18.01:195,18,0	1/1:1,23:24:66.64:524,67,0	1/1:3,18:21:50.80:463,51,0	1/1:3,16:19:17.47:281,17,0	1/1:0,15:15:39.08:465,39,0	1/1:0,15:15:36.10:445,36,0	1/1:0,15:16:39.05:460,39,0	1/1:4,16:20:37.12:350,37,0	1/1:3,15:18:42.73:334,43,0	1/1:2,19:20:57.17:693,57,0	1/1:2,6:8:8:133,8,0	0/1:1,4:5:13.65:139,0,14	1/1:2,26:27:66.14:784,66,0	1/1:3,8:11:7.97:94,8,0	1/1:0,16:16:39.11:467,39,0	1/1:5,18:23:36.33:378,36,0	1/1:3,11:14:20.92:170,21,0	1/1:5,20:25:50.36:477,50,0	1/1:4,17:21:50.62:602,51,0	1/1:0,16:16:33.10:410,33,0	1/1:0,4:4:12.04:148,12,0
chr10	9017109	.	GT	G	9671.54	PASS	AB=1.000;AC=51;AF=0.911;AN=56;BaseQRankSum=9.315;DP=504;FS=1.747;HRun=1;HaplotypeScore=164.7604;InbreedingCoeff=0.7323;MQ=71.56;MQ0=0;MQRankSum=-8.198;QD=21.40;ReadPosRankSum=8.739;VQSLOD=4.4605;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,11:16:21.98:210,22,0	1/1:13,0:13:29.89:352,30,0	0/0:22,0:22:61.08:0,61,871	0/0:30,0:29:75.48:0,75,1130	1/1:10,16:26:23.37:335,23,0	1/1:5,18:23:50.20:444,50,0	1/1:5,10:15:3.66:127,4,0	1/1:13,0:12:18.90:190,19,0	1/1:0,23:23:66.15:522,66,0	1/1:3,18:21:59.19:467,59,0	1/1:6,15:21:30.82:347,31,0	1/1:17,0:17:45.07:515,45,0	1/1:16,0:16:35.99:444,36,0	1/1:14,1:15:39.06:465,39,0	1/1:3,16:19:36.74:328,37,0	1/1:4,15:19:43.21:337,43,0	1/1:21,0:20:57.17:695,57,0	1/1:2,6:8:10.85:136,11,0	0/1:5,0:5:4.76:121,0,5	1/1:27,1:27:66.14:788,66,0	1/1:13,0:13:11.95:119,12,0	1/1:16,1:17:42.11:493,42,0	1/1:4,18:22:35.70:349,36,0	1/1:2,11:13:20.92:171,21,0	1/1:6,20:26:58.35:530,58,0	1/1:22,0:22:54.51:630,55,0	1/1:16,0:16:33.10:410,33,0	1/1:4,0:4:12.04:149,12,0
chr10	9017209	.	GTCAT	G	19122.93	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=7.867;DP=534;FS=5.365;HRun=0;HaplotypeScore=166.9406;InbreedingCoeff=0.8993;MQ=80.14;MQ0=0;MQRankSum=-9.885;QD=38.79;ReadPosRankSum=5.894;VQSLOD=4.2854;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,20:23:27.09:503,27,0	1/1:2,6:8:18.02:299,18,0	0/0:18,0:18:51.17:0,51,1280	0/0:23,0:23:57.09:0,57,1218	1/1:0,28:28:51.17:932,51,0	1/1:1,21:22:45.15:839,45,0	1/1:1,18:19:36.12:671,36,0	1/1:1,15:16:27.03:392,27,0	1/1:1,24:25:51.17:950,51,0	1/1:5,16:21:57.18:1005,57,0	1/1:1,22:23:54.19:1006,54,0	1/1:0,19:19:54.19:1006,54,0	1/1:2,19:21:45.15:838,45,0	1/1:0,17:17:45.15:839,45,0	1/1:1,21:22:42.14:783,42,0	1/1:1,21:22:57.20:1062,57,0	1/1:0,13:13:27.09:503,27,0	1/1:1,4:5:6.02:112,6,0	1/1:0,11:11:30.07:464,30,0	1/1:1,27:28:63.15:1136,63,0	1/1:7,5:12:12.04:216,12,0	1/1:2,12:14:33.11:615,33,0	1/1:0,18:18:33.11:614,33,0	1/1:2,15:17:18.03:335,18,0	1/1:3,22:25:51.09:878,51,0	1/1:1,29:30:87.27:1560,87,0	1/1:0,30:30:75.26:1398,75,0	1/1:0,4:4:9.03:168,9,0
chr10	9017450	.	TG	T	21640.23	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=3.835;DP=694;FS=3.399;HRun=2;HaplotypeScore=136.3271;InbreedingCoeff=0.9835;MQ=84.54;MQ0=0;MQRankSum=-11.628;QD=33.60;ReadPosRankSum=6.944;VQSLOD=3.8714;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:1,24:25:57.14:720,57,0	1/1:0,11:11:30.10:389,30,0	0/0:27,0:27:81.20:0,81,1088	0/0:23,0:23:65.79:0,66,868	1/1:0,24:24:63.03:740,63,0	1/1:1,33:34:90.29:1166,90,0	1/1:1,20:21:54.18:700,54,0	1/1:2,28:30:84.20:1007,84,0	1/1:0,14:14:36.12:467,36,0	1/1:0,37:37:99:1366,108,0	1/1:0,27:27:66:776,66,0	1/1:0,20:20:54.18:700,54,0	1/1:0,28:28:72.18:913,72,0	1/1:0,28:28:69.22:895,69,0	1/1:1,27:28:78.25:1011,78,0	1/1:1,31:32:75.24:972,75,0	1/1:0,27:27:69.22:894,69,0	1/1:0,10:10:27.09:350,27,0	1/1:0,21:21:59.83:711,60,0	1/1:1,43:44:99:1532,126,0	1/1:1,28:29:75.24:972,75,0	1/1:0,23:23:65.88:735,66,0	1/1:0,25:25:66.10:816,66,0	1/1:0,19:19:54.18:700,54,0	1/1:0,24:24:66.21:856,66,0	1/1:0,31:31:87.28:1128,87,0	1/1:0,28:28:75.24:969,75,0	1/1:0,4:4:12.04:156,12,0
chr10	9018018	.	GTC	G	13667.23	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-7.432;DP=632;FS=1.548;HRun=0;HaplotypeScore=155.1061;InbreedingCoeff=0.9924;MQ=75.77;MQ0=2;MQRankSum=-5.535;QD=31.06;ReadPosRankSum=2.312;VQSLOD=6.4790;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,12:16:36.09:424,36,0	1/1:1,9:10:30.09:373,30,0	0/0:18,0:14:17.05:0,17,372	0/0:37,0:36:58.47:0,58,911	1/1:9,27:36:87.23:1028,87,0	1/1:4,24:28:60.19:737,60,0	1/1:11,9:20:51.13:606,51,0	1/1:22,15:37:99:1212,99,0	0/0:24,0:24:47.31:0,47,313	0/0:24,0:24:65.38:0,65,827	0/0:20,0:20:56.96:0,57,621	1/1:8,14:22:66.21:836,66,0	1/1:5,13:18:45.12:539,45,0	1/1:10,20:30:72.22:891,72,0	0/0:36,0:36:95.99:0,96,1019	1/1:1,19:20:42.10:516,42,0	1/1:4,19:23:60.19:758,60,0	1/1:1,6:7:21.07:269,21,0	1/1:12,12:24:60.19:767,60,0	1/1:9,19:28:75.16:893,75,0	1/1:6,14:20:48.16:615,48,0	1/1:4,19:23:66.20:818,66,0	0/0:16,0:16:44.89:0,45,406	0/0:17,0:17:41.87:0,42,371	1/1:5,14:19:57.18:727,57,0	1/1:4,12:16:48.14:603,48,0	1/1:12,24:36:75.18:906,75,0	1/1:0,7:6:12.04:148,12,0
chr10	9018024	.	CTCTA	C	16596.93	PASS	AB=1.000;AC=47;AF=0.839;AN=56;BaseQRankSum=-1.812;DP=657;FS=0.443;HRun=0;HaplotypeScore=177.7423;InbreedingCoeff=0.5770;MQ=73.54;MQ0=2;MQRankSum=-7.706;QD=28.66;ReadPosRankSum=3.632;VQSLOD=4.7870;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:17:32.89:546,33,0	1/1:11,0:11:33.10:500,33,0	0/0:20,0:16:21.06:0,21,619	0/0:37,0:36:73.47:0,73,1420	1/1:38,0:38:80.49:1205,80,0	1/1:27,0:27:63.21:1059,63,0	1/1:22,0:22:46.97:571,47,0	1/1:39,0:39:99:1114,101,0	0/0:21,0:21:51.17:0,51,705	0/1:25,0:25:24.07:24,0,131	1/1:20,0:20:8.46:45,8,0	1/1:22,0:22:65.46:881,65,0	1/1:16,0:17:48.11:770,48,0	1/1:31,0:31:71.63:1067,72,0	0/1:36,0:36:99:108,0,155	1/1:21,0:21:47.63:752,48,0	1/1:23,0:23:59.63:901,60,0	1/1:9,0:9:23.81:341,24,0	1/1:26,0:26:69.62:727,70,0	1/1:27,0:27:74.18:1042,74,0	1/1:23,0:23:48.33:753,48,0	1/1:25,0:25:65.72:1018,66,0	1/1:19,0:19:10.75:81,11,0	0/1:17,0:17:34.31:72,0,34	1/1:20,0:20:59.80:883,60,0	1/1:19,0:19:55.69:707,56,0	1/1:25,13:38:72.14:1219,72,0	1/1:7,0:6:12.04:212,12,0
chr10	9018028	.	ATG	A	12977	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=3.143;DP=646;FS=1.492;HRun=0;HaplotypeScore=168.0997;InbreedingCoeff=0.9810;MQ=71.06;MQ0=2;MQRankSum=-7.837;QD=21.96;ReadPosRankSum=5.555;VQSLOD=5.0963;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,10:16:33.01:379,33,0	1/1:2,9:11:32.74:327,33,0	0/0:19,0:15:27.02:0,27,343	0/0:36,0:35:36.97:0,37,737	1/1:4,31:35:68.39:734,68,0	1/1:7,20:27:68.98:778,69,0	1/1:9,11:20:29.87:311,30,0	1/1:14,23:37:78.14:841,78,0	1/1:4,16:20:42.13:525,42,0	1/1:2,0:25:65.67:336,66,0	1/1:0,0:20:51.26:257,51,0	1/1:9,14:23:50.95:550,51,0	1/1:3,13:17:47.77:499,48,0	1/1:5,24:29:59.75:654,60,0	1/1:3,0:34:73.86:363,74,0	1/1:10,13:23:57.12:669,57,0	1/1:6,19:25:54.16:636,54,0	1/1:1,8:9:21.06:250,21,0	1/1:9,18:27:54.13:622,54,0	1/1:7,18:25:56.90:631,57,0	1/1:5,18:23:42.60:504,43,0	1/1:3,22:25:56.90:641,57,0	1/1:0,0:19:39.59:196,40,0	1/1:2,0:17:34.09:168,34,0	1/1:8,13:22:57.01:662,57,0	1/1:4,14:18:45.10:521,45,0	1/1:17,20:37:71.92:781,72,0	1/1:3,4:6:12.04:139,12,0
chr10	9018507	.	GGAGGA	G	13857.85	PASS	AB=0.615;AC=51;AF=0.911;AN=56;BaseQRankSum=-4.176;DP=706;FS=5.187;HRun=0;HaplotypeScore=167.6327;InbreedingCoeff=0.6973;MQ=77.66;MQ0=8;MQRankSum=-4.055;QD=26.75;ReadPosRankSum=8.660;VQSLOD=3.5424;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:25,3:28:65.80:1242,66,0	1/1:3,6:9:15.05:265,15,0	0/0:78,0:39:46.33:0,46,1030	0/0:108,0:54:54.72:0,55,1218	1/1:4,1:5:12.04:217,12,0	1/1:17,9:26:66.21:1195,66,0	1/1:4,13:17:6.02:108,6,0	1/1:7,27:33:50.53:1323,51,0	1/1:1,16:17:18.06:325,18,0	1/1:18,0:18:47.43:461,47,0	1/1:1,11:12:23.53:144,24,0	1/1:8,20:27:27.09:493,27,0	1/1:1,22:23:33.56:534,34,0	1/1:5,15:20:14.50:207,14,0	1/1:20,0:20:47.86:409,48,0	1/1:1,23:24:33.11:627,33,0	1/1:5,19:23:23.44:374,23,0	1/1:15,4:19:26.83:559,27,0	0/1:6,10:16:25.50:556,0,26	1/1:7,12:19:23.14:533,23,0	1/1:16,11:27:42.61:718,43,0	1/1:2,14:16:33.11:566,33,0	1/1:12,1:13:23.82:187,24,0	1/1:44,0:44:99:924,101,0	1/1:13,4:17:29.97:501,30,0	1/1:4,17:21:51.12:938,51,0	1/1:1,11:12:9.03:168,9,0	1/1:9,0:9:15.05:287,15,0
chr10	9018516	.	GAGA	G	2211.71	PASS	AB=0.992;AC=35;AF=0.625;AN=56;BaseQRankSum=3.719;DP=723;FS=0.376;HRun=0;HaplotypeScore=193.7632;InbreedingCoeff=0.4016;MQ=74.73;MQ0=31;MQRankSum=-4.554;QD=5.67;ReadPosRankSum=3.798;VQSLOD=2.3857;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:29,1:30:34.63:280,35,0	1/1:7,0:7:12.26:45,12,0	0/0:94,1:38:78.04:0,78,1280	0/0:129,0:53:99:0,111,1592	1/1:6,0:6:10.27:44,10,0	1/1:24,0:24:16.88:205,17,0	1/1:14,0:14:4.36:19,4,0	0/1:30,0:29:91.34:191,0,91	1/1:16,0:16:15.56:61,16,0	0/0:20,0:19:43.06:0,43,323	0/0:15,0:15:32.50:0,32,259	1/1:25,0:24:8.10:97,8,0	1/1:23,0:23:33.73:206,34,0	1/1:18,1:19:2.16:98,2,0	0/0:20,0:20:50.02:0,50,341	0/1:25,0:25:9.93:113,0,10	0/1:23,0:21:32.26:63,0,32	0/1:18,0:18:42.60:91,0,43	0/1:15,1:15:80.79:132,0,81	1/1:14,2:16:22.31:139,22,0	1/1:25,0:25:24.66:103,25,0	1/1:19,0:19:23.89:161,24,0	0/0:9,0:9:26.51:0,27,201	0/0:41,0:41:83.40:0,83,586	0/1:14,0:14:25.90:76,0,26	0/1:21,0:21:12.47:173,0,12	1/1:11,0:11:8.05:36,8,0	1/1:8,0:8:16.33:75,16,0
chr10	9018524	.	CAGAGA	C	1484.03	PASS	AB=0.959;AC=35;AF=0.833;AN=42;BaseQRankSum=1.228;DP=695;FS=0.000;HRun=0;HaplotypeScore=206.1216;InbreedingCoeff=0.1535;MQ=69.76;MQ0=40;MQRankSum=0.409;QD=3.99;ReadPosRankSum=2.236;VQSLOD=2.2999;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:29:11.17:92,11,0	./.	./.	./.	0/0:7,0:7:2.84:0,3,14	1/1:19,0:22:8.92:70,9,0	./.	./.	./.	1/1:14,6:19:15.02:231,15,0	1/1:15,0:15:8.15:138,8,0	1/1:25,0:24:8.94:65,9,0	1/1:18,0:23:17.95:196,18,0	0/1:20,0:20:7.18:74,0,7	1/1:15,4:19:3.01:49,3,0	1/1:23,0:25:6.90:71,7,0	1/1:24,0:22:6.13:33,6,0	0/1:13,0:14:2.90:29,0,3	1/1:16,0:15:2.94:18,3,0	1/1:15,0:17:11.89:85,12,0	./.	0/1:16,0:17:5.70:60,0,6	1/1:8,1:9:3.01:52,3,0	1/1:39,0:39:8.26:139,8,0	1/1:11,0:12:5.89:37,6,0	1/1:16,0:18:12.01:125,12,0	0/0:9,0:9:2.92:0,3,17	1/1:7,0:7:3:26,3,0
chr10	9019684	.	C	CT	27969.37	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-0.816;DP=712;FS=3.450;HRun=1;HaplotypeScore=169.2708;InbreedingCoeff=0.9152;MQ=59.49;MQ0=0;MQRankSum=-3.590;QD=40.19;ReadPosRankSum=2.969;VQSLOD=4.3811;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,29:29:69.19:1007,69,0	1/1:0,12:12:36.08:514,36,0	0/0:9,0:8:14.81:0,15,145	0/0:7,0:5:4.55:0,5,61	1/1:0,28:28:78.22:1144,78,0	1/1:0,37:37:99:1526,102,0	1/1:1,19:20:54.18:807,54,0	1/1:4,25:29:78.24:1123,78,0	1/1:2,15:17:42.14:627,42,0	1/1:1,42:42:99:1797,123,0	1/1:1,26:27:69.23:1032,69,0	1/1:1,22:23:60.20:897,60,0	1/1:0,27:27:75.25:1122,75,0	1/1:0,19:19:48.16:718,48,0	1/1:0,30:30:84.28:1257,84,0	1/1:0,30:30:84.23:1231,84,0	1/1:0,23:23:63.21:942,63,0	1/1:0,17:17:48.16:719,48,0	1/1:1,19:20:57.11:769,57,0	1/1:1,44:45:99:1856,129,0	1/1:0,10:10:27.09:405,27,0	1/1:1,38:39:99:1617,108,0	1/1:0,26:26:75.04:1123,75,0	1/1:0,15:15:42.14:629,42,0	1/1:2,27:29:72.24:1078,72,0	1/1:0,41:41:99:1694,120,0	1/1:1,42:43:99:1661,111,0	1/1:0,17:17:45.15:674,45,0
chr10	9019781	.	GAGAGAGAGAGAGAGAGAGTC	G	12410.38	PASS	AB=0.986;AC=29;AF=0.518;AN=56;BaseQRankSum=-0.598;DP=636;FS=1.732;HRun=0;HaplotypeScore=356.9537;InbreedingCoeff=0.3327;MQ=45.77;MQ0=35;MQRankSum=-2.156;QD=39.03;ReadPosRankSum=-4.718;VQSLOD=2.4343;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:23:59.89:60,0,513	1/1:4,0:4:12.04:230,12,0	0/0:75,0:12:15.82:0,16,380	0/0:104,0:18:20.24:0,20,390	0/0:23,0:23:15.06:0,15,433	0/1:32,0:32:99:226,0,1001	0/1:11,0:11:99:164,0,135	1/1:6,22:26:63.21:1062,63,0	0/0:14,0:14:24.35:0,24,357	0/0:24,0:24:67.16:0,67,1827	0/0:23,0:23:51.13:0,51,999	1/1:12,1:13:27.05:652,27,0	1/1:24,2:26:66.23:2072,66,0	1/1:13,3:16:40.84:1005,41,0	0/0:22,0:22:45.15:0,45,1325	0/1:18,0:18:99:221,0,368	0/1:12,1:13:12.04:588,0,12	0/1:9,0:9:58.18:58,0,147	1/1:2,14:15:45.15:862,45,0	1/1:14,0:14:35.94:776,36,0	0/1:8,0:8:36.51:37,0,77	1/1:13,5:18:45.06:1264,45,0	0/0:16,0:16:21.72:0,22,626	0/0:17,0:17:19.23:0,19,589	0/1:23,0:22:26.04:26,0,570	0/1:17,1:18:71.86:1287,0,72	1/1:21,2:23:63.13:1674,63,0	1/1:2,3:4:4.83:147,5,0
chr10	9019793	.	GAGAGAGTC	G	6348.74	PASS	AB=1.000;AC=43;AF=0.768;AN=56;BaseQRankSum=5.952;DP=655;FS=13.422;HRun=0;HaplotypeScore=304.4579;InbreedingCoeff=0.1502;MQ=37.35;MQ0=38;MQRankSum=-1.014;QD=12.12;ReadPosRankSum=-1.158;VQSLOD=2.2350;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:22:2.26:213,0,2	1/1:4,0:5:11.97:120,12,0	0/1:88,0:11:7.74:8,0,202	0/0:116,0:18:17.84:0,18,225	1/1:24,0:24:29.77:288,30,0	1/1:31,0:31:67.87:702,68,0	1/1:12,1:13:28.58:323,29,0	1/1:25,0:23:10.52:486,11,0	1/1:11,4:15:39.11:660,39,0	0/1:25,0:25:88.90:271,0,89	0/1:18,0:18:33.73:88,0,34	1/1:13,0:13:22.37:172,22,0	1/1:26,0:26:34.67:409,35,0	1/1:17,0:18:12.42:120,12,0	0/1:23,0:23:5.57:6,0,103	1/1:22,0:22:48.03:506,48,0	0/1:13,0:13:16.28:41,0,16	1/1:9,0:9:12.31:106,12,0	1/1:17,0:16:33.75:377,34,0	1/1:16,0:16:20.70:157,21,0	0/1:8,0:8:10.25:54,0,10	1/1:14,0:14:8.51:72,9,0	0/0:15,0:15:9.60:0,10,184	0/1:18,0:18:14.99:15,0,75	1/1:19,0:18:38.89:387,39,0	0/1:16,0:17:2.27:386,0,2	1/1:19,0:20:12.56:312,13,0	1/1:5,0:4:6.02:72,6,0
chr10	9019795	.	GAGAGTC	G	9400.09	PASS	AB=1.000;AC=50;AF=0.893;AN=56;BaseQRankSum=3.405;DP=648;FS=11.135;HRun=0;HaplotypeScore=279.4637;InbreedingCoeff=0.4897;MQ=37.07;MQ0=37;MQRankSum=-1.366;QD=21.17;ReadPosRankSum=1.078;VQSLOD=3.1557;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:16,6:22:12.86:418,13,0	1/1:5,0:5:12.03:138,12,0	0/0:87,0:12:2.60:0,3,184	0/0:117,0:18:17.26:0,17,267	1/1:13,11:24:38.35:550,38,0	1/1:13,17:30:69.23:1321,69,0	1/1:10,3:13:30.10:509,30,0	1/1:24,0:23:42.59:529,43,0	1/1:15,0:15:38.99:456,39,0	1/1:26,0:26:69.43:584,69,0	1/1:16,1:17:32.49:202,32,0	1/1:13,0:13:21.52:221,22,0	1/1:26,0:26:50.23:425,50,0	1/1:17,0:17:17.23:115,17,0	1/1:23,0:23:40.31:185,40,0	1/1:15,6:21:48.07:800,48,0	1/1:12,0:12:3.21:52,3,0	1/1:7,1:8:13.72:224,14,0	1/1:17,0:16:33.93:424,34,0	1/1:16,0:16:20.48:192,20,0	1/1:8,0:8:11.79:73,12,0	1/1:14,0:14:12.42:122,12,0	0/1:15,0:15:5.90:6,0,122	0/1:16,0:16:28.90:29,0,57	1/1:7,12:18:42.14:865,42,0	1/1:18,0:18:43.72:500,44,0	1/1:20,0:20:37.31:402,37,0	1/1:5,0:4:5.99:59,6,0
chr10	9019797	.	GAGTC	G	8631.95	PASS	AB=1.000;AC=43;AF=0.768;AN=56;BaseQRankSum=-3.810;DP=639;FS=26.602;HRun=0;HaplotypeScore=266.3492;InbreedingCoeff=0.0665;MQ=37.12;MQ0=37;MQRankSum=-1.263;QD=19.80;ReadPosRankSum=-3.685;VQSLOD=2.8115;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:21:22.86:258,23,0	1/1:5,0:5:12.03:138,12,0	0/0:85,0:11:5.92:0,6,181	0/0:118,0:19:17.54:0,18,282	1/1:23,1:24:38.06:354,38,0	1/1:30,0:30:69.12:770,69,0	1/1:12,0:12:30.02:318,30,0	1/1:24,0:23:32.37:511,32,0	1/1:15,0:15:38.99:420,39,0	1/1:14,12:26:72.24:1224,72,0	1/1:5,12:17:36.12:608,36,0	0/1:13,0:13:5.18:188,0,5	0/1:25,0:25:99:241,0,176	0/1:17,0:17:51.47:51,0,85	1/1:7,15:22:45.07:795,45,0	1/1:21,0:21:48.06:540,48,0	0/1:12,0:12:34.52:35,0,50	1/1:7,0:7:3.68:113,4,0	1/1:17,0:16:29.53:400,30,0	0/1:15,0:15:0.72:170,0,1	1/1:8,0:8:11.70:70,12,0	0/1:14,0:14:51.36:51,0,190	0/1:14,0:14:45.58:57,0,46	1/1:16,0:16:14.99:80,15,0	1/1:18,0:17:42:450,42,0	0/1:18,0:18:16.57:454,0,17	0/1:20,0:20:86.57:293,0,87	1/1:5,0:4:5.38:44,5,0
chr10	9019799	.	GTC	G	7349.30	PASS	AB=0.730;AC=44;AF=0.786;AN=56;BaseQRankSum=-4.167;DP=618;FS=22.781;HRun=0;HaplotypeScore=253.0774;InbreedingCoeff=0.0687;MQ=37.21;MQ0=37;MQRankSum=0.524;QD=17.67;ReadPosRankSum=-3.089;VQSLOD=3.2905;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,7:18:24.79:215,25,0	1/1:0,4:4:12.03:138,12,0	0/0:84,0:10:1.99:0,2,167	0/0:117,0:19:19.62:0,20,295	1/1:15,8:23:38.61:304,39,0	1/1:17,12:29:68.30:626,68,0	1/1:5,7:12:29.90:311,30,0	1/1:24,0:23:40.37:522,40,0	1/1:9,6:15:38.92:373,39,0	1/1:17,7:24:72.06:830,72,0	1/1:13,3:16:35.91:341,36,0	0/1:4,9:13:15.14:188,0,15	0/1:15,9:24:99:232,0,187	0/1:10,5:15:50.13:50,0,92	1/1:15,7:22:43.99:346,44,0	1/1:8,13:21:47.65:513,48,0	0/1:9,2:11:36.30:36,0,50	1/1:4,2:6:12.31:131,12,0	1/1:15,2:16:30.90:402,31,0	1/1:5,10:15:0.38:187,0,0	1/1:6,1:7:11.49:66,11,0	0/1:11,3:14:58.13:58,0,156	1/1:9,4:13:5.91:89,6,0	1/1:5,10:15:20.66:281,21,0	1/1:14,3:16:41.79:395,42,0	0/1:4,13:17:15.59:418,0,16	0/1:11,8:19:66.65:267,0,67	0/1:4,1:4:0.81:31,0,1
chr10	9019805	.	GAAAC	G	56.04	PASS	AB=0.982;AC=6;AF=0.107;AN=56;BaseQRankSum=1.266;DP=640;FS=0.000;HRun=0;HaplotypeScore=316.5745;InbreedingCoeff=0.1822;MQ=35.32;MQ0=30;MQRankSum=-1.273;QD=0.84;ReadPosRankSum=0.186;VQSLOD=1.7112;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:11.87:0,12,262	0/0:5,0:5:15.05:0,15,187	0/0:75,6:11:3.46:0,3,390	0/0:110,1:21:24.65:0,25,575	0/0:25,0:24:25.13:0,25,245	0/0:31,0:31:56.86:0,57,640	0/0:14,0:14:24.47:0,24,291	0/0:28,0:27:47.63:0,48,683	0/0:13,0:14:32.39:0,32,305	0/0:24,0:24:51.29:0,51,673	0/0:19,0:19:38.34:0,38,299	0/0:13,0:13:30.02:0,30,376	0/1:24,0:24:27.95:28,0,399	0/0:13,0:13:2.81:0,3,86	0/0:23,0:23:45.72:0,46,485	0/0:26,0:26:48.92:0,49,618	0/1:11,1:13:1.66:2,0,127	0/1:6,0:6:38.36:38,0,49	0/0:21,0:21:23.13:0,23,504	0/0:15,0:15:32.64:0,33,362	1/1:8,1:9:8.69:88,9,0	0/0:14,0:14:23.46:0,23,301	0/0:12,0:11:25.38:0,25,352	0/1:15,0:15:15.87:16,0,170	0/0:18,0:18:33.26:0,33,268	0/0:21,0:21:42.61:0,43,619	0/0:21,0:21:18.63:0,19,423	0/0:5,0:5:7.20:0,7,50
chr10	9019818	.	AGAC	A	115.36	PASS	AB=0.907;AC=6;AF=0.107;AN=56;BaseQRankSum=2.318;DP=628;FS=0.000;HRun=0;HaplotypeScore=339.4585;InbreedingCoeff=-0.1215;MQ=39.23;MQ0=21;MQRankSum=-1.014;QD=1.41;ReadPosRankSum=-3.346;VQSLOD=0.9434;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:19:18.66:0,19,612	0/0:6,0:6:18.06:0,18,440	0/0:69,0:17:40.97:0,41,624	0/0:90,0:22:7.03:0,7,534	0/0:28,0:27:28.89:0,29,607	0/0:31,0:31:63.41:0,63,1563	0/0:15,0:15:32.47:0,32,656	0/0:34,0:33:68.76:0,69,1321	0/0:15,0:15:36.12:0,36,743	0/0:24,0:24:70.48:0,70,1587	0/0:18,0:18:31.89:0,32,751	0/0:14,1:15:27.02:0,27,619	0/1:17,8:25:99:126,0,662	0/1:15,1:16:6.58:7,0,120	0/0:22,0:22:39.06:0,39,1190	0/0:28,0:28:53.36:0,53,1391	0/1:9,3:12:24.10:24,0,164	0/0:8,0:7:18.05:0,18,319	0/0:24,0:23:30.48:0,30,1062	0/0:13,2:15:22.85:0,23,552	0/1:8,0:8:8.69:9,0,26	0/0:12,3:15:8.75:0,9,220	0/0:10,0:9:23.89:0,24,539	0/0:19,0:19:11.65:0,12,168	0/0:17,0:17:35.19:0,35,723	0/0:19,1:20:25.67:0,26,1051	0/1:15,1:16:42.62:43,0,694	0/1:5,0:5:25.82:26,0,121
chr10	9019833	.	GAC	G	616.69	PASS	AB=0.912;AC=22;AF=0.393;AN=56;BaseQRankSum=-0.740;DP=595;FS=24.091;HRun=0;HaplotypeScore=358.2020;InbreedingCoeff=-0.4907;MQ=40.49;MQ0=14;MQRankSum=-1.344;QD=1.61;ReadPosRankSum=-1.250;VQSLOD=0.5442;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:20,3:22:29.67:30,0,273	0/0:8,0:8:19.79:0,20,124	0/0:38,1:21:48.90:0,49,731	0/0:70,0:24:5.85:0,6,495	0/1:21,5:25:70.91:71,0,243	0/0:26,0:26:63.96:0,64,589	0/1:12,3:15:38.76:39,0,256	0/1:30,0:29:99:104,0,746	0/1:20,1:21:17.75:18,0,210	0/1:20,2:22:14.52:15,0,487	0/1:16,1:17:18.43:18,0,285	0/1:19,1:20:23.32:23,0,162	0/1:30,0:30:15.20:15,0,171	1/1:14,4:18:2.95:98,3,0	0/0:23,1:24:15.75:0,16,292	0/0:31,1:32:40.88:0,41,473	0/1:12,1:13:39.01:39,0,78	0/1:8,0:7:4.40:4,0,105	0/1:16,3:18:65.13:65,0,403	0/1:15,1:16:21.12:21,0,175	0/1:4,3:7:10.04:18,0,10	0/1:14,1:15:20.05:20,0,54	0/0:12,1:12:15.60:0,16,190	0/1:20,2:22:40.27:40,0,85	0/1:15,1:16:7.74:8,0,260	0/1:16,3:19:67.41:67,0,269	0/1:17,1:18:11.56:12,0,172	0/1:6,1:7:7.73:49,0,8
chr10	9019837	.	AAG	A	4370.52	PASS	AB=0.972;AC=46;AF=0.821;AN=56;BaseQRankSum=7.830;DP=588;FS=15.701;HRun=0;HaplotypeScore=355.4087;InbreedingCoeff=0.2042;MQ=42.00;MQ0=10;MQRankSum=-4.253;QD=8.92;ReadPosRankSum=5.247;VQSLOD=3.4559;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:21:0.41:98,0,0	1/1:8,0:8:20.84:149,21,0	0/0:41,0:22:51:0,51,746	0/0:57,0:22:40.65:0,41,603	1/1:27,0:26:17.45:157,17,0	1/1:26,0:26:27.13:275,27,0	1/1:15,0:15:20.83:175,21,0	0/1:27,0:26:99:208,0,126	1/1:23,0:23:20.94:202,21,0	0/1:21,1:22:51.48:248,0,51	1/1:20,0:20:17.23:124,17,0	1/1:20,0:20:34.36:210,34,0	1/1:29,0:29:42.37:278,42,0	1/1:18,0:18:19.17:144,19,0	1/1:23,0:23:36.34:235,36,0	1/1:34,0:34:55.26:394,55,0	1/1:10,2:12:0.14:101,0,0	0/1:6,1:6:15.49:43,0,15	0/1:17,0:16:29.12:202,0,29	1/1:18,0:18:23.28:161,23,0	1/1:6,1:7:5.01:28,5,0	1/1:14,0:14:11.45:84,11,0	1/1:15,0:14:13.02:86,13,0	0/1:24,0:24:16.70:48,0,17	1/1:17,0:17:16.12:127,16,0	1/1:20,0:20:19.85:299,20,0	1/1:19,0:19:36.15:231,36,0	0/1:6,0:6:3.33:64,0,3
chr10	9019843	.	GAA	G	8160.21	PASS	AB=0.917;AC=51;AF=0.911;AN=56;BaseQRankSum=4.232;DP=573;FS=14.346;HRun=3;HaplotypeScore=335.7760;InbreedingCoeff=0.7200;MQ=42.31;MQ0=8;MQRankSum=-3.379;QD=16.89;ReadPosRankSum=7.428;VQSLOD=0.4402;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:15,6:21:6.71:180,7,0	1/1:0,8:8:21.07:274,21,0	0/0:41,0:22:54.75:0,55,773	0/0:49,0:19:46.16:0,46,582	1/1:13,14:26:19.82:218,20,0	1/1:6,18:24:44.66:556,45,0	1/1:7,7:13:20.34:263,20,0	1/1:20,6:24:36.01:405,36,0	1/1:10,12:22:36.10:387,36,0	1/1:14,9:22:43.01:580,43,0	1/1:11,8:19:25.95:237,26,0	1/1:4,16:20:47.60:443,48,0	1/1:13,14:27:43.88:503,44,0	1/1:11,7:18:28.87:237,29,0	1/1:9,14:23:44.06:472,44,0	1/1:9,25:34:61.35:746,61,0	1/1:10,2:12:7.06:162,7,0	1/1:6,1:6:8.86:93,9,0	1/1:13,6:18:27.41:354,27,0	1/1:7,10:17:26.91:281,27,0	1/1:9,0:9:7.07:43,7,0	1/1:9,4:13:14.88:147,15,0	1/1:8,6:13:13.56:164,14,0	0/1:20,2:22:0.09:66,0,0	1/1:11,7:18:17.92:214,18,0	1/1:9,11:20:48.54:587,49,0	1/1:10,10:20:41.09:449,41,0	1/1:5,1:6:9.25:100,9,0
chr10	9019849	.	GAGAC	G	2311.70	PASS	AB=0.980;AC=40;AF=0.714;AN=56;BaseQRankSum=8.468;DP=555;FS=1.736;HRun=0;HaplotypeScore=344.7776;InbreedingCoeff=-0.0078;MQ=42.55;MQ0=10;MQRankSum=-3.512;QD=4.96;ReadPosRankSum=4.278;VQSLOD=1.1859;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:22:38.13:66,0,38	1/1:10,0:9:15.15:48,15,0	0/0:40,0:21:49.26:0,49,942	0/0:49,0:18:40.29:0,40,608	0/1:25,1:25:14.86:15,0,27	1/1:21,0:21:31.60:102,32,0	0/1:14,1:14:0.94:23,0,1	0/1:19,0:17:84.98:143,0,85	0/1:22,0:22:0.17:118,0,0	0/1:22,2:22:48.81:298,0,49	1/1:20,0:20:3.05:77,3,0	0/1:21,0:21:2.78:86,0,3	1/1:26,0:26:34.43:220,34,0	0/1:14,1:15:47.35:54,0,47	1/1:21,2:23:24.81:92,25,0	1/1:34,0:34:56.13:262,56,0	1/1:12,0:12:7.52:38,8,0	1/1:5,0:5:8.26:72,8,0	0/1:22,0:20:10.72:11,0,376	1/1:17,0:17:10.59:99,11,0	1/1:8,0:8:2.85:15,3,0	0/1:7,0:7:3.16:5,0,3	1/1:13,0:12:14.72:66,15,0	1/1:21,0:21:4.64:86,5,0	1/1:18,1:19:8.64:27,9,0	0/1:18,0:18:37.97:104,0,38	1/1:19,0:19:36.59:250,37,0	0/1:7,0:7:14.53:93,0,15
chr10	9019851	.	GAC	G	4622.70	PASS	AB=0.896;AC=48;AF=0.857;AN=56;BaseQRankSum=9.266;DP=526;FS=1.327;HRun=0;HaplotypeScore=316.0667;InbreedingCoeff=0.3531;MQ=43.21;MQ0=9;MQRankSum=-2.865;QD=10.41;ReadPosRankSum=5.547;VQSLOD=4.0681;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:15,2:19:30.54:81,0,31	1/1:10,0:9:20.89:155,21,0	0/0:37,0:20:42.11:0,42,604	0/0:43,0:16:30.37:0,30,335	1/1:22,3:25:13.47:96,13,0	1/1:18,1:19:42.16:301,42,0	1/1:14,0:13:16.57:108,17,0	0/1:18,1:17:57.89:58,0,81	1/1:16,3:22:37.13:313,37,0	1/1:20,2:20:27.63:304,28,0	1/1:13,4:18:19.45:141,19,0	1/1:20,1:21:32.99:193,33,0	1/1:16,7:24:46.15:370,46,0	1/1:12,2:14:14.62:77,15,0	1/1:19,1:21:39.93:267,40,0	1/1:28,5:35:67.68:509,68,0	0/1:10,2:12:11.54:58,0,12	1/1:3,1:4:8.66:67,9,0	0/1:19,1:18:99:133,0,183	1/1:12,3:15:22.70:184,23,0	1/1:7,1:8:2.89:16,3,0	1/1:6,1:7:7.40:50,7,0	1/1:8,2:11:19.09:160,19,0	1/1:17,3:20:11.04:60,11,0	1/1:11,7:18:14.02:96,14,0	1/1:17,0:18:40.55:305,41,0	1/1:14,4:19:41.70:368,42,0	1/1:4,1:7:15.41:153,15,0
chr10	9020078	.	TACAAA	T	26420	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=6.877;DP=538;FS=35.082;HRun=0;HaplotypeScore=187.2767;InbreedingCoeff=0.9737;MQ=90.00;MQ0=0;MQRankSum=-11.867;QD=55.04;ReadPosRankSum=3.574;VQSLOD=3.6597;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,16:23:48.09:951,48,0	1/1:1,4:5:15.04:285,15,0	0/0:28,0:28:78.27:0,78,2316	0/0:30,0:30:84.25:0,84,2270	1/1:1,13:14:33.01:626,33,0	1/1:4,17:21:63.13:1318,63,0	1/1:1,15:16:45.15:975,45,0	1/1:9,25:34:96.26:1855,96,0	1/1:3,14:17:51.07:1013,51,0	1/1:7,14:21:63.14:1276,63,0	1/1:6,16:22:54.02:973,54,0	1/1:7,20:27:78.21:1529,78,0	1/1:6,18:24:66.15:1312,66,0	1/1:6,22:28:81.21:1664,81,0	1/1:4,23:27:81.14:1607,81,0	1/1:0,15:15:45.15:976,45,0	1/1:3,11:14:42.07:822,42,0	1/1:1,3:4:12:159,12,0	1/1:3,15:18:48.12:996,48,0	1/1:5,27:32:87.09:1706,87,0	1/1:1,11:12:32.89:573,33,0	1/1:4,16:20:54.09:1082,54,0	1/1:3,10:13:36.12:780,36,0	1/1:5,13:18:32.29:619,32,0	1/1:4,13:17:48.15:1000,48,0	1/1:2,10:12:36.12:781,36,0	1/1:4,15:19:54.13:1085,54,0	1/1:0,7:7:21.07:455,21,0
chr10	9020116	.	C	CA	25546.83	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=5.198;DP=659;FS=15.222;HRun=2;HaplotypeScore=177.1195;InbreedingCoeff=0.9857;MQ=83.70;MQ0=0;MQRankSum=-11.810;QD=42.37;ReadPosRankSum=5.505;VQSLOD=1.9432;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,23:24:54.18:840,54,0	1/1:0,6:6:18.06:277,18,0	0/0:28,0:28:78.24:0,78,1061	0/0:28,0:28:78.20:0,78,1023	1/1:0,21:21:48.16:751,48,0	1/1:0,30:30:81.28:1273,81,0	1/1:0,29:30:73.03:1151,73,0	1/1:1,42:43:99:1871,120,0	1/1:0,32:32:96.26:1501,96,0	1/1:2,26:28:81.23:1244,81,0	1/1:0,20:20:57.19:871,57,0	1/1:0,31:31:90.24:1388,90,0	1/1:0,19:19:54.18:847,54,0	1/1:0,27:27:75.25:1175,75,0	1/1:1,29:30:87.30:1371,87,0	1/1:0,20:20:57.13:878,57,0	1/1:0,15:15:45.15:716,45,0	1/1:1,5:6:15.05:239,15,0	1/1:1,23:24:69.23:1092,69,0	1/1:0,34:34:93.16:1400,93,0	1/1:0,9:9:21:294,21,0	1/1:0,24:23:60.12:913,60,0	1/1:2,14:16:39.13:610,39,0	1/1:0,17:17:39.13:609,39,0	1/1:1,24:25:72.19:1118,72,0	1/1:1,23:24:69.24:1102,69,0	1/1:1,31:32:81.19:1250,81,0	1/1:0,16:16:48.16:766,48,0
chr10	9021006	.	C	CA	19163.31	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=2.790;DP=524;FS=3.652;HRun=3;HaplotypeScore=114.5477;InbreedingCoeff=0.9968;MQ=75.56;MQ0=0;MQRankSum=-9.145;QD=39.35;ReadPosRankSum=4.785;VQSLOD=3.7336;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,13:15:39.13:561,39,0	1/1:1,9:10:27.05:365,27,0	0/0:22,0:22:54.14:0,54,649	0/0:15,0:15:27.18:0,27,407	1/1:2,30:32:90.26:1271,90,0	1/1:0,18:18:51.17:733,51,0	1/1:1,25:26:72.20:1012,72,0	1/1:3,24:27:72.20:1007,72,0	1/1:2,18:20:54.18:766,54,0	1/1:3,17:20:54.17:754,54,0	1/1:0,22:22:63.18:875,63,0	1/1:1,18:19:57.16:798,57,0	1/1:4,26:31:84.23:1163,84,0	1/1:0,28:28:81.27:1165,81,0	1/1:1,21:22:60.17:841,60,0	1/1:1,13:14:36.12:518,36,0	1/1:1,9:10:27.09:380,27,0	1/1:1,9:10:27.09:389,27,0	1/1:1,13:14:39.13:561,39,0	1/1:0,24:24:72.24:1036,72,0	1/1:0,10:10:30.10:432,30,0	1/1:1,17:18:51.13:711,51,0	1/1:2,14:16:42.14:604,42,0	1/1:0,13:13:33.07:451,33,0	1/1:1,16:17:48.12:667,48,0	1/1:2,18:20:54.18:768,54,0	1/1:0,22:22:66.22:949,66,0	1/1:0,9:9:27.09:388,27,0
chr10	9021072	.	AC	A	9307.91	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=6.630;DP=291;FS=106.886;HRun=1;HaplotypeScore=110.5445;InbreedingCoeff=0.7280;MQ=85.56;MQ0=2;MQRankSum=-8.907;QD=36.08;ReadPosRankSum=5.724;VQSLOD=-0.7148;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,4:4:12.04:167,12,0	1/1:0,7:7:21.07:292,21,0	0/0:18,0:18:54:0,54,693	0/0:15,0:15:36.59:0,37,559	1/1:0,16:16:42.14:581,42,0	1/1:0,14:14:39.13:543,39,0	1/1:2,5:7:20.97:229,21,0	1/1:3,15:16:48.16:660,48,0	1/1:0,13:12:33.11:455,33,0	1/1:0,9:9:27.06:349,27,0	1/1:0,10:10:30.05:394,30,0	1/1:1,13:14:42.10:563,42,0	1/1:0,16:15:42.10:563,42,0	1/1:1,14:14:42.11:564,42,0	1/1:0,12:12:36.08:479,36,0	1/1:2,13:15:45.10:583,45,0	1/1:0,1:1:3.01:42,3,0	1/1:0,1:1:3.01:42,3,0	1/1:2,8:10:30.06:380,30,0	1/1:1,12:13:24.08:333,24,0	1/1:0,2:2:6.02:84,6,0	1/1:0,10:10:24.08:334,24,0	1/1:0,9:9:21.07:292,21,0	1/1:0,8:8:14.75:208,15,0	1/1:0,2:2:6.02:84,6,0	1/1:0,11:11:33.11:459,33,0	1/1:0,15:15:36.12:502,36,0	1/1:0,6:6:9.03:125,9,0
chr10	9021151	.	TAA	T	5163.67	PASS	AB=0.792;AC=48;AF=0.960;AN=50;BaseQRankSum=-0.598;DP=191;FS=27.025;HRun=8;HaplotypeScore=93.6756;InbreedingCoeff=-0.0695;MQ=69.20;MQ0=0;MQRankSum=-2.180;QD=27.03;ReadPosRankSum=2.147;VQSLOD=2.9638;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	1/1:0,6:6:12.03:146,12,0	0/1:5,3:8:9.47:142,0,9	0/1:5,1:6:5.13:40,0,5	1/1:2,9:11:24.07:286,24,0	1/1:0,5:5:15.05:180,15,0	1/1:2,6:8:12.03:146,12,0	1/1:3,9:12:27.08:329,27,0	1/1:0,5:5:9.02:110,9,0	1/1:2,11:14:36.11:439,36,0	1/1:1,9:10:21.06:256,21,0	1/1:1,2:3:6.02:73,6,0	1/1:2,9:11:24.07:292,24,0	1/1:3,5:7:12.03:146,12,0	1/1:1,7:8:12.03:146,12,0	1/1:0,4:4:9.03:110,9,0	./.	1/1:0,1:1:3.01:37,3,0	1/1:1,5:6:15.04:183,15,0	1/1:1,14:15:39.12:475,39,0	./.	1/1:0,4:4:12.04:146,12,0	1/1:0,8:8:18.05:219,18,0	1/1:0,2:2:3.01:37,3,0	1/1:0,8:8:24.08:292,24,0	1/1:2,10:12:30.04:348,30,0	1/1:0,13:13:39.12:475,39,0	1/1:0,3:3:9.03:110,9,0
chr10	9022568	.	CACG	C	15708.87	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=1.831;DP=414;FS=7.663;HRun=0;HaplotypeScore=118.0416;InbreedingCoeff=0.9580;MQ=84.23;MQ0=0;MQRankSum=-9.006;QD=43.51;ReadPosRankSum=5.960;VQSLOD=6.1464;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,26:26:72.25:1227,72,0	1/1:0,6:6:15.05:256,15,0	0/0:20,0:20:57.19:0,57,1168	0/0:14,0:14:39.13:0,39,870	1/1:0,21:21:42.10:716,42,0	1/1:0,18:18:39.13:665,39,0	1/1:0,12:12:29.95:511,30,0	1/1:1,12:13:36.04:551,36,0	1/1:0,11:10:27.09:460,27,0	1/1:0,12:12:36.12:614,36,0	1/1:0,15:15:36.12:614,36,0	1/1:0,13:13:36.12:614,36,0	1/1:2,18:20:51.17:860,51,0	1/1:1,11:12:33.11:561,33,0	1/1:0,25:25:72.25:1226,72,0	1/1:0,15:15:42.14:716,42,0	1/1:1,25:26:68.95:1145,69,0	1/1:0,4:4:12.04:205,12,0	1/1:1,13:14:39.13:665,39,0	1/1:1,16:17:39.09:634,39,0	0/0:19,0:19:54.02:0,54,836	1/1:0,11:11:24.08:409,24,0	1/1:0,11:11:21.07:358,21,0	1/1:0,10:10:18.06:307,18,0	1/1:0,13:13:36.12:614,36,0	1/1:1,17:19:54.18:913,54,0	1/1:0,14:14:42.14:716,42,0	1/1:0,3:3:9.03:153,9,0
chr10	9023077	.	AT	A	25886.30	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=7.079;DP=700;FS=1.243;HRun=1;HaplotypeScore=148.9874;InbreedingCoeff=0.9990;MQ=84.55;MQ0=0;MQRankSum=-11.095;QD=39.52;ReadPosRankSum=6.834;VQSLOD=3.9078;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,35:35:99:1384,99,0	1/1:0,13:13:39.13:545,39,0	0/0:24,0:24:72.18:0,72,1059	0/0:21,0:21:60.20:0,60,933	1/1:0,40:40:99:1584,114,0	1/1:0,19:19:48.16:671,48,0	1/1:0,23:23:63.21:881,63,0	1/1:0,35:35:99:1355,102,0	1/1:0,21:21:51.17:713,51,0	1/1:0,34:34:99:1386,102,0	1/1:0,28:28:84.28:1167,84,0	1/1:0,20:20:57.19:788,57,0	1/1:0,23:23:69.23:964,69,0	1/1:0,25:25:69.23:965,69,0	1/1:0,20:20:57.19:797,57,0	1/1:0,21:21:60.20:839,60,0	1/1:0,24:24:69.23:964,69,0	1/1:0,9:9:27.09:374,27,0	1/1:0,25:25:75.25:1049,75,0	1/1:0,40:40:99:1552,111,0	1/1:0,13:13:33.11:461,33,0	1/1:0,28:28:81.27:1131,81,0	1/1:0,32:32:90.17:1248,90,0	1/1:0,18:18:48.16:671,48,0	1/1:0,29:29:84.28:1174,84,0	1/1:0,32:32:96.32:1336,96,0	1/1:0,38:38:99:1468,105,0	1/1:0,10:10:30.10:419,30,0
chr10	9023394	.	TA	T	20239.86	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=1.209;DP=642;FS=12.220;HRun=2;HaplotypeScore=118.8796;InbreedingCoeff=0.9959;MQ=81.47;MQ0=0;MQRankSum=-10.120;QD=33.62;ReadPosRankSum=6.624;VQSLOD=3.0314;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,39:42:99:1369,108,0	1/1:0,10:10:27.09:349,27,0	0/0:23,0:24:59.37:0,59,784	0/0:15,0:16:43.94:0,44,556	1/1:0,27:27:75.21:949,75,0	1/1:0,27:27:78.25:1007,78,0	1/1:0,27:27:60.20:775,60,0	1/1:1,21:22:63.13:731,63,0	1/1:0,30:30:78.25:1005,78,0	1/1:2,32:34:93.24:1141,93,0	1/1:1,23:24:69.05:847,69,0	1/1:0,24:24:63.20:814,63,0	1/1:1,13:14:30.10:387,30,0	1/1:1,31:32:81.26:1046,81,0	1/1:0,31:31:84.27:1085,84,0	1/1:1,22:23:60.09:752,60,0	1/1:0,22:22:57.19:735,57,0	1/1:0,12:12:33.11:426,33,0	1/1:0,9:9:27.04:317,27,0	1/1:1,21:22:55.24:802,55,0	1/1:0,11:11:21.07:271,21,0	1/1:1,21:22:60.19:775,60,0	1/1:0,27:27:75.20:947,75,0	1/1:0,21:21:63.20:813,63,0	1/1:0,23:23:54.18:698,54,0	1/1:0,23:23:69.19:853,69,0	1/1:1,32:33:81.11:1021,81,0	1/1:1,9:10:26.95:324,27,0
chr10	9024252	.	TA	T	20487.86	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=3.501;DP=561;FS=42.969;HRun=1;HaplotypeScore=88.4658;InbreedingCoeff=0.9911;MQ=84.37;MQ0=0;MQRankSum=-9.760;QD=38.88;ReadPosRankSum=5.391;VQSLOD=1.8913;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,11:11:21.07:294,21,0	1/1:0,6:6:18.06:252,18,0	0/0:15,0:15:45.13:0,45,674	0/0:19,0:19:57.19:0,57,893	1/1:0,14:14:42.14:572,42,0	1/1:0,25:25:72.24:999,72,0	1/1:0,17:17:51.17:713,51,0	1/1:0,43:43:99:1688,126,0	1/1:0,21:21:60.20:839,60,0	1/1:0,24:24:72.24:1007,72,0	1/1:0,20:20:60.20:839,60,0	1/1:0,19:19:51.17:712,51,0	1/1:0,31:31:78.26:1089,78,0	1/1:0,17:17:45.15:629,45,0	1/1:1,29:30:87.29:1205,87,0	1/1:0,34:34:93.31:1300,93,0	1/1:1,14:15:39.13:545,39,0	1/1:1,10:11:27.09:375,27,0	1/1:0,16:16:45.10:589,45,0	1/1:0,16:16:48.16:668,48,0	1/1:0,22:22:60.20:833,60,0	1/1:0,18:18:51.17:713,51,0	1/1:0,22:22:54.18:755,54,0	1/1:0,14:14:42.14:586,42,0	1/1:0,18:18:51.17:713,51,0	1/1:0,21:21:63.21:881,63,0	1/1:1,34:35:99:1398,102,0	1/1:0,7:7:21.07:293,21,0
chr10	9025419	.	A	AAATT	33596.34	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-2.098;DP=462;FS=10.263;HRun=0;HaplotypeScore=99.1514;InbreedingCoeff=0.8615;MQ=67.46;MQ0=0;MQRankSum=-8.235;QD=77.06;ReadPosRankSum=5.464;VQSLOD=6.3323;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,13:16:39.13:1065,39,0	1/1:2,7:9:27.09:765,27,0	0/0:13,0:13:39.12:0,39,741	0/0:13,0:12:33.07:0,33,533	1/1:1,25:29:84.29:2257,84,0	1/1:0,19:19:54.19:1565,54,0	1/1:1,6:7:21.07:595,21,0	1/1:13,13:30:90.30:2319,90,0	1/1:2,13:16:45.15:1284,45,0	1/1:3,24:27:81.28:2326,81,0	1/1:4,15:19:57.15:1548,57,0	1/1:3,11:16:36.12:1010,36,0	1/1:2,16:19:51.18:1451,51,0	1/1:3,10:16:39.13:1097,39,0	1/1:3,12:16:39.13:1111,39,0	1/1:2,19:21:60.18:1673,60,0	1/1:2,14:16:45.15:1303,45,0	1/1:1,1:2:6.02:130,6,0	1/1:4,16:20:57.20:1610,57,0	1/1:2,19:23:69.12:1725,69,0	1/1:0,9:9:24.08:695,24,0	1/1:3,6:9:24.04:628,24,0	1/1:1,13:14:39.13:1127,39,0	1/1:2,3:5:15.05:417,15,0	1/1:4,23:29:75.26:2154,75,0	1/1:0,21:23:69.24:1917,69,0	1/1:1,21:24:60.21:1737,60,0	1/1:0,1:1:3.01:87,3,0
chr10	9027152	.	GCTCACGCT	G	9234.51	PASS	AB=0.750;AC=44;AF=0.880;AN=50;BaseQRankSum=-4.543;DP=450;FS=17.350;HRun=0;HaplotypeScore=109.8503;InbreedingCoeff=0.5385;MQ=76.66;MQ0=8;MQRankSum=-3.663;QD=29.50;ReadPosRankSum=3.796;VQSLOD=3.1787;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:15:36.08:503,36,0	1/1:6,0:6:15.05:248,15,0	0/0:40,0:26:66.46:0,66,1100	0/0:61,0:28:52.30:0,52,770	1/1:12,0:12:6.02:68,6,0	1/1:9,0:9:27.09:442,27,0	./.	1/1:25,0:25:75.22:1182,75,0	1/1:9,0:9:27.09:439,27,0	0/1:8,0:8:33.42:282,0,33	1/1:11,0:11:21.03:346,21,0	1/1:11,0:11:33.10:555,33,0	1/1:11,0:12:24.55:396,25,0	1/1:1,11:12:3.01:36,3,0	1/1:19,0:19:50.74:766,51,0	1/1:1,0:25:3.07:37,3,0	1/1:14,0:14:5.97:59,6,0	1/1:0,0:8:3.01:68,3,0	1/1:16,0:16:42.07:593,42,0	./.	1/1:19,0:19:41.66:599,42,0	0/1:0,12:12:0:0,0,0	./.	1/1:14,0:14:6.08:343,6,0	1/1:10,0:10:30.08:466,30,0	1/1:17,0:17:38.72:591,39,0	1/1:11,0:11:30:433,30,0	1/1:17,0:16:48.16:783,48,0
chr10	9027154	.	TCACG	T	9451.21	PASS	AB=1.000;AC=45;AF=0.900;AN=50;BaseQRankSum=-4.021;DP=442;FS=16.163;HRun=0;HaplotypeScore=84.6839;InbreedingCoeff=0.6772;MQ=76.88;MQ0=8;MQRankSum=-4.790;QD=30.59;ReadPosRankSum=2.613;VQSLOD=3.5101;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:15:36.08:503,36,0	1/1:6,0:6:15.05:248,15,0	0/0:38,0:24:66.46:0,66,1109	0/0:61,0:28:52.61:0,53,768	1/1:0,12:12:6.02:68,6,0	1/1:9,0:9:27.09:442,27,0	./.	1/1:0,25:25:75.22:1182,75,0	1/1:9,0:9:27.09:439,27,0	1/1:9,0:9:20.76:338,21,0	1/1:11,0:11:21.03:346,21,0	1/1:11,0:11:33.10:510,33,0	1/1:12,0:12:24.55:396,25,0	1/1:12,1:12:3.01:36,3,0	1/1:18,0:18:51.16:816,51,0	1/1:24,0:24:2.65:36,3,0	1/1:1,12:13:6.02:95,6,0	1/1:8,0:8:3.01:38,3,0	1/1:2,14:16:42.07:593,42,0	./.	1/1:19,0:19:45.14:691,45,0	0/1:12,0:12:0:0,0,0	./.	1/1:14,0:14:26.84:377,27,0	1/1:10,0:10:30.08:466,30,0	1/1:1,14:15:38.73:615,39,0	1/1:11,0:11:30:433,30,0	1/1:17,0:16:48.16:783,48,0
chr10	9027804	.	CA	C	271.37	PASS	AB=0.888;AC=15;AF=0.268;AN=56;BaseQRankSum=-6.674;DP=506;FS=10.961;HRun=17;HaplotypeScore=199.7098;InbreedingCoeff=0.0173;MQ=53.41;MQ0=11;MQRankSum=0.470;QD=1.30;ReadPosRankSum=2.229;VQSLOD=-0.5217;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:11.62:0,12,54	0/1:8,0:8:4.04:4,0,44	0/0:38,0:14:6.05:0,6,52	0/0:18,0:9:5.18:0,5,25	0/0:29,0:29:49.10:0,49,203	0/0:23,0:23:55.40:0,55,246	0/0:9,0:9:20.88:0,21,86	0/1:21,1:22:11.20:11,0,29	0/1:9,1:10:4.74:13,0,5	0/1:16,5:21:3.14:75,0,3	0/1:10,1:12:7.02:24,0,7	0/1:14,0:14:12.67:13,0,35	0/0:19,0:19:17.99:0,18,126	0/0:15,0:15:10.51:0,11,80	1/1:19,6:25:0.09:119,0,0	0/0:20,0:20:38.93:0,39,170	0/0:12,0:10:11.17:0,11,56	0/0:22,0:21:23.45:0,23,104	0/1:13,2:15:21.91:22,0,23	0/1:25,1:25:29.97:30,0,46	1/1:8,0:9:2.87:9,3,0	0/0:13,0:12:15.46:0,15,89	0/1:10,4:14:5.36:58,0,5	0/1:8,4:12:9.90:35,0,10	0/0:26,0:26:53.40:0,53,239	0/1:17,0:19:1.26:1,0,37	0/0:25,0:25:10.94:0,11,170	0/0:8,0:8:4.51:0,5,21
chr10	9027812	.	A	AAAC	5038.43	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=-0.049;DP=563;FS=0.366;HRun=0;HaplotypeScore=240.8070;InbreedingCoeff=0.8351;MQ=46.75;MQ0=14;MQRankSum=-3.253;QD=29.64;ReadPosRankSum=2.179;VQSLOD=4.5212;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:17,4:21:39.73:382,40,0	0/1:14,0:13:3.27:3,0,154	0/0:39,0:12:7.58:0,8,169	0/0:21,0:10:10.11:0,10,143	1/1:12,16:30:82.24:1191,82,0	1/1:10,16:26:68.03:941,68,0	1/1:4,6:10:25.24:358,25,0	0/0:32,0:30:50.35:0,50,378	0/0:10,0:10:23.35:0,23,165	0/0:28,0:27:60.36:0,60,470	0/0:9,0:9:19.67:0,20,126	0/0:17,0:17:24.40:0,24,291	0/0:23,0:23:48.97:0,49,451	0/0:16,0:16:30.41:0,30,203	0/0:25,0:24:11.09:0,11,287	1/1:9,12:22:58.94:799,59,0	0/0:14,0:12:10.59:0,11,121	1/1:13,5:20:18.90:496,19,0	0/0:21,0:21:13.74:0,14,338	0/0:31,0:30:49.75:0,50,485	0/0:6,0:6:7.70:0,8,34	0/0:14,0:13:2.05:0,2,214	0/0:13,0:13:33.82:0,34,229	0/0:15,0:15:6.19:0,6,104	1/1:13,13:26:67.05:868,67,0	0/0:22,0:22:42.88:0,43,352	0/0:29,0:29:53.97:0,54,557	0/0:8,0:8:23.44:0,23,163
chr10	9027819	.	AAAC	A	1328.06	PASS	AB=0.973;AC=25;AF=0.446;AN=56;BaseQRankSum=-3.420;DP=549;FS=12.757;HRun=0;HaplotypeScore=260.0596;InbreedingCoeff=-0.4932;MQ=44.69;MQ0=13;MQRankSum=-2.061;QD=3.01;ReadPosRankSum=-7.656;VQSLOD=-0.6845;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:12,7:19:2.42:68,0,2	0/1:11,0:12:38.98:39,0,52	0/0:37,0:12:10.90:0,11,182	0/0:22,0:11:1.88:0,2,101	0/1:24,6:30:16.32:329,0,16	0/0:28,0:28:10.54:0,11,143	0/1:10,0:10:8.43:25,0,8	0/1:33,0:31:21.64:120,0,22	0/1:12,0:12:2.04:2,0,43	0/1:24,0:23:34.74:35,0,56	0/1:11,0:11:8.70:55,0,9	0/1:15,0:16:14.12:14,0,97	0/1:20,0:22:37.09:37,0,139	0/1:17,0:17:2.17:2,0,55	1/1:23,0:22:2.58:143,3,0	0/1:21,0:21:60.16:82,0,60	0/1:14,0:12:34.52:65,0,35	0/1:18,0:17:42.62:61,0,43	0/1:17,0:17:2.04:2,0,79	0/1:27,0:28:66.67:86,0,67	1/1:6,0:6:4.82:43,5,0	0/0:14,0:13:10.48:0,10,104	0/1:14,0:14:43.45:61,0,43	0/1:15,0:15:27.58:28,0,38	0/1:22,4:26:53.60:54,0,139	0/1:22,0:22:19.35:101,0,19	0/1:24,0:28:26.41:26,0,188	0/0:7,0:7:5.43:0,5,53
chr10	9027821	.	AC	A	4230.06	PASS	AB=0.983;AC=51;AF=0.911;AN=56;BaseQRankSum=-4.470;DP=541;FS=40.956;HRun=1;HaplotypeScore=237.0046;InbreedingCoeff=0.0997;MQ=43.44;MQ0=12;MQRankSum=-2.042;QD=7.82;ReadPosRankSum=-0.016;VQSLOD=-0.0574;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:19:16.75:92,17,0	1/1:12,1:12:27.51:148,28,0	0/1:30,3:11:3.17:3,0,144	0/1:21,0:11:2.21:2,0,61	1/1:30,0:30:60.82:305,61,0	1/1:28,0:28:10.47:135,10,0	1/1:10,0:10:21.58:95,22,0	1/1:32,0:30:53.05:341,53,0	0/1:12,0:12:18.07:21,0,18	1/1:22,0:21:3.06:76,3,0	1/1:11,0:11:4.10:82,4,0	1/1:16,0:16:34.81:203,35,0	1/1:22,0:22:30.62:192,31,0	1/1:16,1:17:40.97:233,41,0	1/1:21,2:22:10.34:167,10,0	1/1:21,0:21:39.48:201,39,0	1/1:15,0:12:28.24:158,28,0	1/1:18,0:17:9.47:121,9,0	1/1:16,0:16:33.59:191,34,0	1/1:29,0:28:51.47:342,51,0	1/1:5,1:6:11.81:53,12,0	1/1:14,0:13:27.33:119,27,0	0/1:14,0:14:20.42:59,0,20	1/1:13,1:15:2.27:61,2,0	0/1:27,0:27:4.45:154,0,4	1/1:22,0:22:41.97:273,42,0	1/1:28,0:28:63.81:318,64,0	1/1:7,0:7:17.69:85,18,0
chr10	9027822	.	C	CAA	2840.84	PASS	AB=1.000;AC=41;AF=0.732;AN=56;BaseQRankSum=-4.812;DP=539;FS=6.484;HRun=17;HaplotypeScore=252.1929;InbreedingCoeff=0.3228;MQ=44.81;MQ0=12;MQRankSum=-2.972;QD=5.98;ReadPosRankSum=3.443;VQSLOD=-0.4025;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:19,0:19:18.84:22,0,19	1/1:12,1:12:11.74:130,12,0	0/0:30,0:10:18.20:0,18,178	0/0:20,0:12:18.21:0,18,180	0/1:30,0:30:2.28:83,0,2	0/1:28,0:28:2.85:3,0,73	0/1:10,0:10:1.80:2,0,3	1/1:29,2:30:40.13:292,40,0	0/0:12,0:12:15.23:0,15,63	0/1:22,0:21:5.98:6,0,31	1/1:11,0:11:13.61:84,14,0	1/1:14,2:16:28.66:177,29,0	1/1:21,1:22:21.10:136,21,0	1/1:17,0:17:21.44:96,21,0	1/1:23,0:22:33.54:171,34,0	0/1:20,0:20:13.24:13,0,16	1/1:14,1:12:16.52:83,17,0	0/1:18,0:17:28.65:82,0,29	1/1:16,1:17:22.10:179,22,0	1/1:29,0:28:46.24:257,46,0	0/1:6,0:6:2.29:38,0,2	1/1:12,2:13:27.78:260,28,0	1/1:14,0:14:8.69:75,9,0	1/1:15,0:15:12.85:68,13,0	0/1:27,0:27:40.50:40,0,64	1/1:21,1:22:32.14:256,32,0	1/1:28,0:28:44.90:275,45,0	1/1:5,2:7:16.36:183,16,0
chr10	9027825	.	AAAC	A	3418.06	PASS	AB=0.937;AC=32;AF=0.571;AN=56;BaseQRankSum=-2.600;DP=526;FS=0.000;HRun=0;HaplotypeScore=253.2525;InbreedingCoeff=-0.2509;MQ=45.87;MQ0=11;MQRankSum=-1.421;QD=7.45;ReadPosRankSum=-6.315;VQSLOD=1.4089;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:19:15.27:91,15,0	0/1:10,3:12:57.24:98,0,57	0/0:30,0:10:18.91:0,19,314	0/0:23,0:13:15.48:0,15,249	0/1:28,2:30:25.68:92,0,26	0/1:27,1:28:43.40:92,0,43	0/1:10,0:10:0.12:16,0,0	0/1:24,7:29:13.52:326,0,14	0/1:10,0:10:4.10:59,0,4	1/1:10,12:21:37.90:426,38,0	1/1:6,5:11:29.80:231,30,0	0/1:16,0:16:21.21:21,0,102	0/1:19,1:20:84.20:84,0,155	0/1:15,1:16:28.55:29,0,63	1/1:13,9:21:62.54:529,63,0	0/1:18,2:20:39.48:119,0,39	0/1:13,2:12:40.66:129,0,41	0/1:16,0:15:4.33:42,0,4	0/1:18,0:18:17.73:18,0,63	0/1:23,4:26:47.80:234,0,48	1/1:6,0:6:2.12:55,2,0	0/0:14,0:13:11.36:0,11,118	1/1:5,8:13:38.54:310,39,0	1/1:10,4:14:14.61:130,15,0	0/1:27,0:27:5.51:6,0,61	0/1:18,3:21:22.95:159,0,23	0/1:24,3:27:99:115,0,188	0/1:7,0:7:8.59:9,0,48
chr10	9027826	.	AAC	A	6442.14	PASS	AB=0.993;AC=44;AF=0.786;AN=56;BaseQRankSum=0.986;DP=517;FS=3.079;HRun=0;HaplotypeScore=234.7622;InbreedingCoeff=-0.0298;MQ=47.12;MQ0=11;MQRankSum=-2.521;QD=13.23;ReadPosRankSum=-2.195;VQSLOD=3.8471;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,12:18:37.70:328,38,0	0/1:12,1:12:3.08:93,0,3	0/0:30,0:11:1.49:0,1,235	0/1:21,0:12:7.72:8,0,198	1/1:8,21:29:70.82:586,71,0	1/1:2,26:28:80.75:724,81,0	1/1:2,8:10:23.97:267,24,0	1/1:31,0:29:35.26:290,35,0	1/1:5,5:10:20.16:157,20,0	1/1:22,0:21:51.96:429,52,0	1/1:11,0:11:29.66:233,30,0	0/1:16,0:16:17.22:55,0,17	0/1:20,0:20:45.98:72,0,46	0/1:16,0:16:13.72:61,0,14	1/1:22,0:21:62.12:487,62,0	1/1:3,17:20:59.35:497,59,0	0/1:14,0:11:5.84:68,0,6	1/1:3,13:15:34.88:399,35,0	0/1:18,0:18:5.19:77,0,5	1/1:26,0:25:14.35:211,14,0	1/1:6,0:6:5.10:47,5,0	0/1:14,0:13:10.02:10,0,19	1/1:13,0:13:38.43:302,38,0	1/1:12,1:13:16.88:133,17,0	1/1:5,21:26:67.65:601,68,0	1/1:21,0:21:28.75:194,29,0	0/1:27,0:27:40.11:110,0,40	0/1:6,0:6:5.35:5,0,6
chr10	9027827	.	AC	A	7046.25	PASS	AB=1.000;AC=53;AF=0.946;AN=56;BaseQRankSum=3.863;DP=506;FS=0.000;HRun=1;HaplotypeScore=225.5694;InbreedingCoeff=0.6436;MQ=51.27;MQ0=9;MQRankSum=-3.703;QD=14.80;ReadPosRankSum=3.141;VQSLOD=4.7368;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:17:37.73:266,38,0	1/1:13,0:12:27.29:156,27,0	0/0:28,1:13:7.73:0,8,258	0/1:22,0:13:6.45:6,0,164	1/1:28,1:29:66.90:398,67,0	1/1:28,0:28:79.64:571,80,0	1/1:10,0:10:22.89:133,23,0	1/1:30,0:29:61.14:378,61,0	1/1:5,5:10:23.75:203,24,0	1/1:14,7:20:42.03:521,42,0	1/1:9,2:11:29.82:249,30,0	1/1:15,0:15:31.59:191,32,0	1/1:19,0:19:36.79:187,37,0	1/1:16,0:16:25.72:169,26,0	1/1:12,7:21:61.63:531,62,0	1/1:20,0:20:58.46:378,58,0	1/1:13,0:11:22.59:123,23,0	1/1:16,0:15:42.61:300,43,0	1/1:18,0:18:31.98:200,32,0	1/1:26,0:25:48.83:337,49,0	1/1:4,2:6:14.63:93,15,0	1/1:13,0:13:22.69:103,23,0	1/1:11,1:12:35.72:278,36,0	1/1:7,4:11:20.58:197,21,0	1/1:25,1:26:67.66:426,68,0	1/1:20,0:20:45.75:285,46,0	1/1:26,0:26:54.53:295,55,0	1/1:6,0:6:15.88:72,16,0
chr10	9027833	.	A	AACC	7832.29	PASS	AB=0.968;AC=31;AF=0.554;AN=56;BaseQRankSum=13.538;DP=466;FS=36.506;HRun=0;HaplotypeScore=236.4926;InbreedingCoeff=-0.5192;MQ=56.79;MQ0=7;MQRankSum=-2.909;QD=18.65;ReadPosRankSum=11.135;VQSLOD=2.6507;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:17,0:17:12.71:349,0,13	0/1:12,0:11:52.42:270,0,52	0/0:25,0:13:6.33:0,6,478	0/0:20,0:13:28.89:0,29,362	0/1:27,0:27:84.13:447,0,84	0/1:29,0:29:76.86:549,0,77	0/1:8,0:8:40.60:41,0,118	0/1:26,1:27:87.68:692,0,88	1/1:9,0:9:7.18:142,7,0	1/1:21,0:20:52.47:585,52,0	1/1:9,0:9:22.09:273,22,0	0/1:14,0:14:95.26:121,0,95	0/1:15,3:18:99:245,0,154	0/1:13,2:15:99:183,0,121	1/1:17,0:17:46.96:532,47,0	0/1:20,0:20:84.36:327,0,84	0/1:13,1:12:20.16:344,0,20	0/1:16,0:15:72.25:220,0,72	0/1:16,0:16:99:240,0,168	0/1:17,2:19:97.15:451,0,97	0/1:5,0:6:24.05:109,0,24	0/1:11,1:12:79.62:180,0,80	1/1:9,0:9:24.46:254,24,0	0/1:10,0:10:3.69:151,0,4	0/1:27,0:27:99:367,0,145	0/1:14,0:14:99:250,0,111	0/1:25,2:27:99:380,0,292	0/1:5,0:5:13.14:132,0,13
chr10	9027834	.	C	CCCA	4101.51	PASS	AB=0.963;AC=30;AF=0.536;AN=56;BaseQRankSum=9.559;DP=458;FS=43.888;HRun=0;HaplotypeScore=247.3003;InbreedingCoeff=-0.4307;MQ=57.15;MQ0=6;MQRankSum=-4.359;QD=10.13;ReadPosRankSum=8.589;VQSLOD=1.3978;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:17,0:17:31.36:85,0,31	0/1:12,0:11:50.73:122,0,51	0/0:25,0:13:36.97:0,37,554	0/0:20,0:13:32.24:0,32,435	0/1:26,0:26:99:102,0,123	0/1:28,0:28:50.82:51,0,175	0/0:8,0:8:4.02:0,4,123	0/1:28,0:27:89.30:222,0,89	1/1:4,0:9:10.54:65,11,0	1/1:8,12:19:52.48:747,52,0	1/1:3,5:9:24.54:320,25,0	0/1:14,0:14:61.85:62,0,110	0/1:17,0:17:53.95:54,0,190	0/1:13,0:13:56.99:57,0,141	1/1:9,9:17:49.01:615,49,0	0/1:19,0:20:59.96:60,0,120	0/1:12,0:11:7.91:128,0,8	0/1:16,0:15:13.06:13,0,118	0/1:15,0:15:62.62:63,0,200	0/1:20,0:19:99:183,0,119	0/1:3,0:5:19.46:53,0,19	0/1:13,0:13:72.27:110,0,72	1/1:1,8:9:26.30:370,26,0	0/1:5,5:10:4.19:221,0,4	0/1:27,0:27:40.22:40,0,260	0/1:14,0:14:99:114,0,133	0/1:27,0:27:99:112,0,305	0/1:5,0:5:13.53:133,0,14
chr10	9027839	.	A	AAC	8025.42	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=8.259;DP=318;FS=8.154;HRun=0;HaplotypeScore=180.4865;InbreedingCoeff=0.7855;MQ=79.44;MQ0=6;MQRankSum=-7.724;QD=29.83;ReadPosRankSum=6.960;VQSLOD=5.8010;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,10:10:29.87:338,30,0	1/1:6,3:8:20.94:259,21,0	0/0:26,0:17:50.86:0,51,584	0/0:23,0:18:40.92:0,41,487	1/1:4,13:17:42.66:461,43,0	1/1:1,20:21:63.16:759,63,0	1/1:0,2:2:6.02:72,6,0	1/1:10,3:13:36.11:503,36,0	1/1:6,0:6:15.03:156,15,0	1/1:13,0:12:36.11:434,36,0	1/1:7,0:7:18.49:172,18,0	1/1:6,5:11:14.33:297,14,0	1/1:7,4:11:18.99:296,19,0	1/1:7,2:9:23.87:238,24,0	1/1:10,0:9:27.04:273,27,0	1/1:3,10:13:37.35:457,37,0	1/1:7,4:10:25.63:352,26,0	1/1:2,8:9:6.08:277,6,0	1/1:2,5:7:12.89:244,13,0	1/1:13,3:15:32.70:378,33,0	1/1:3,0:3:5.91:81,6,0	1/1:3,4:7:14.17:211,14,0	1/1:9,0:9:14.30:219,14,0	1/1:7,0:7:10.84:89,11,0	1/1:1,14:15:45.05:535,45,0	1/1:5,3:8:17.99:258,18,0	1/1:14,4:18:38.95:457,39,0	1/1:1,4:5:13.29:210,13,0
chr10	9027840	.	CCA	C	3403.66	PASS	AB=0.927;AC=39;AF=0.696;AN=56;BaseQRankSum=-1.874;DP=309;FS=8.523;HRun=0;HaplotypeScore=188.4010;InbreedingCoeff=-0.0313;MQ=81.49;MQ0=6;MQRankSum=-4.028;QD=13.30;ReadPosRankSum=0.245;VQSLOD=2.8699;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,0:10:1.67:152,2,0	1/1:6,3:8:1.82:127,2,0	0/0:25,0:18:50.84:0,51,962	0/0:23,0:18:44.98:0,45,806	0/1:15,2:17:33.09:211,0,33	0/1:20,1:21:64.01:153,0,64	0/1:2,0:2:4.99:20,0,5	1/1:5,9:14:39.10:468,39,0	0/1:7,0:7:18.70:62,0,19	1/1:13,0:12:29.41:184,29,0	1/1:7,0:7:11.90:100,12,0	0/1:10,0:10:1.41:32,0,1	0/1:7,4:11:9.40:141,0,9	1/1:5,3:8:6.65:122,7,0	1/1:10,0:9:17.12:142,17,0	0/1:11,2:13:36.16:125,0,36	1/1:8,3:9:1.61:170,2,0	0/1:10,0:9:38.58:39,0,54	1/1:5,0:5:11.42:108,11,0	1/1:8,7:14:15.83:333,16,0	1/1:3,0:3:5.90:60,6,0	1/1:5,1:6:5.59:96,6,0	1/1:9,0:9:5.31:80,5,0	0/1:7,0:7:6.40:6,0,20	0/1:15,0:15:54.08:115,0,54	1/1:5,3:8:15.12:152,15,0	0/1:10,5:15:10.61:208,0,11	0/0:4,0:4:1.06:0,1,5
chr10	9027841	.	C	CCAG	10292.33	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=7.906;DP=295;FS=17.554;HRun=0;HaplotypeScore=168.8382;InbreedingCoeff=0.8610;MQ=84.45;MQ0=4;MQRankSum=-8.521;QD=41.67;ReadPosRankSum=6.990;VQSLOD=4.7855;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,0:10:30.07:441,30,0	1/1:6,0:6:18.06:271,18,0	0/0:25,0:19:49.98:0,50,867	0/0:23,0:18:43.93:0,44,690	1/1:17,0:17:44.98:618,45,0	1/1:21,0:21:63.21:935,63,0	1/1:2,0:2:6.02:88,6,0	1/1:14,0:14:38.95:622,39,0	1/1:3,5:8:17.83:298,18,0	1/1:1,12:12:36.12:700,36,0	1/1:1,6:7:18.06:320,18,0	1/1:5,0:5:15.05:266,15,0	1/1:9,0:11:27.01:315,27,0	1/1:5,0:6:18.06:262,18,0	1/1:0,9:9:27.09:485,27,0	1/1:13,0:14:38.82:552,39,0	1/1:10,0:9:26.01:364,26,0	1/1:9,0:9:24.51:360,25,0	1/1:5,0:5:15.05:281,15,0	1/1:11,0:13:38.88:482,39,0	1/1:1,2:3:9:120,9,0	1/1:5,0:6:18.06:277,18,0	1/1:1,8:9:26.88:446,27,0	1/1:2,5:7:12.48:181,12,0	1/1:15,0:15:43.70:634,44,0	1/1:9,0:9:21.03:315,21,0	1/1:9,0:11:30.05:436,30,0	1/1:4,0:4:12.04:223,12,0
chr10	9027842	.	A	AG	3774.55	PASS	AB=0.867;AC=50;AF=0.893;AN=56;BaseQRankSum=7.294;DP=295;FS=24.038;HRun=0;HaplotypeScore=182.1604;InbreedingCoeff=0.6013;MQ=85.88;MQ0=3;MQRankSum=-7.883;QD=15.34;ReadPosRankSum=6.362;VQSLOD=2.7264;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,10:10:29.83:239,30,0	1/1:3,3:6:13.63:90,14,0	0/0:26,0:20:54.01:0,54,719	0/0:22,0:18:44.58:0,45,535	1/1:4,13:17:42.13:340,42,0	1/1:1,20:21:62.96:569,63,0	1/1:0,2:2:6.01:57,6,0	1/1:11,3:14:36.82:222,37,0	1/1:7,0:7:10.38:31,10,0	1/1:13,0:12:32.54:145,33,0	1/1:6,0:6:10.88:30,11,0	1/1:0,5:5:14.69:94,15,0	0/1:7,4:11:15.62:57,0,16	1/1:4,2:6:13.47:90,13,0	1/1:10,0:9:11.69:39,12,0	1/1:4,10:14:38.69:332,39,0	1/1:6,4:8:15.37:116,15,0	1/1:1,8:9:21.51:210,22,0	1/1:0,5:5:14.97:123,15,0	1/1:11,3:14:13.94:125,14,0	1/1:3,0:3:7.28:35,7,0	1/1:3,4:7:16.15:87,16,0	1/1:10,0:10:13.52:41,14,0	0/1:6,0:6:2.46:3,0,2	1/1:0,14:14:41.93:365,42,0	1/1:7,3:10:18.50:114,19,0	1/1:8,4:12:14.88:137,15,0	1/1:0,4:4:11.91:86,12,0
chr10	9027843	.	A	AAGCT	19724.07	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=6.707;DP=407;FS=4.381;HRun=0;HaplotypeScore=198.3299;InbreedingCoeff=0.9536;MQ=77.99;MQ0=3;MQRankSum=-9.408;QD=55.25;ReadPosRankSum=4.741;VQSLOD=5.7392;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,10:14:39.12:775,39,0	1/1:7,3:10:30.10:588,30,0	0/0:27,0:22:57.16:0,57,1094	0/0:23,0:18:42.14:0,42,842	1/1:11,13:24:63.22:1258,63,0	1/1:7,20:27:77.75:1639,78,0	1/1:4,2:6:15.05:314,15,0	1/1:24,3:27:75.26:1529,75,0	1/1:7,0:12:36.12:699,36,0	1/1:5,0:17:51.17:996,51,0	1/1:1,0:7:18.06:329,18,0	1/1:4,5:9:27.09:569,27,0	1/1:12,4:16:45.12:755,45,0	1/1:6,2:8:24.08:460,24,0	1/1:8,0:16:48.16:914,48,0	1/1:7,10:18:54.19:1130,54,0	1/1:7,4:11:29.93:541,30,0	1/1:2,8:10:26.68:552,27,0	1/1:7,5:12:36.12:766,36,0	1/1:18,3:21:54.18:1048,54,0	1/1:3,0:5:12.04:243,12,0	1/1:6,4:10:30.09:585,30,0	1/1:5,0:13:36.12:679,36,0	1/1:4,0:9:24.02:384,24,0	1/1:6,14:20:57.20:1224,57,0	1/1:10,3:13:36.08:649,36,0	1/1:12,4:16:45.14:838,45,0	1/1:0,4:4:12.04:257,12,0
chr10	9028149	.	CAAATA	C	21397.05	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=7.015;DP=550;FS=0.000;HRun=0;HaplotypeScore=135.4937;InbreedingCoeff=0.8057;MQ=69.31;MQ0=2;MQRankSum=-10.576;QD=44.39;ReadPosRankSum=6.384;VQSLOD=4.8662;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,20:24:48.16:944,48,0	1/1:1,3:4:3.01:63,3,0	0/0:33,0:32:72.58:0,73,2091	0/0:34,0:33:66.22:0,66,1765	1/1:2,11:13:12.04:251,12,0	1/1:2,19:21:60.21:1230,60,0	1/1:3,17:20:39.13:807,39,0	1/1:4,28:32:81.25:1559,81,0	1/1:1,15:16:42.14:881,42,0	1/1:3,18:21:51.12:973,51,0	1/1:2,2:4:6.02:125,6,0	1/1:2,15:17:33.11:648,33,0	1/1:4,27:31:75.26:1546,75,0	1/1:2,26:28:69.24:1426,69,0	1/1:1,19:20:48.16:1007,48,0	1/1:1,26:27:63.22:1295,63,0	1/1:2,8:10:24.08:478,24,0	1/1:4,5:9:12.04:252,12,0	1/1:4,12:15:36.12:734,36,0	1/1:2,19:21:45.15:921,45,0	1/1:5,11:15:15.05:315,15,0	1/1:0,14:14:27.09:534,27,0	1/1:1,8:9:9:189,9,0	1/1:3,20:23:35.74:753,36,0	1/1:1,10:11:24.08:503,24,0	1/1:3,36:38:99:2187,108,0	1/1:3,29:32:75.18:1525,75,0	1/1:0,4:4:12.04:252,12,0
chr10	9028259	.	G	GT	5288.68	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-1.569;DP=718;FS=4.493;HRun=5;HaplotypeScore=172.9441;InbreedingCoeff=0.9834;MQ=61.53;MQ0=0;MQRankSum=-1.578;QD=30.93;ReadPosRankSum=-2.238;VQSLOD=2.0840;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:1,17:18:39.06:487,39,0	0/0:17,0:17:39.89:0,40,223	0/0:21,0:20:45:0,45,457	0/0:17,0:15:28.54:0,29,268	1/1:3,29:33:65.51:1018,66,0	1/1:1,32:33:93.01:1122,93,0	1/1:4,12:16:36.12:464,36,0	0/0:30,0:30:66.38:0,66,356	0/0:19,0:19:41.48:0,41,262	0/0:33,0:33:80.65:0,81,394	0/0:23,0:23:39.72:0,40,292	0/0:21,0:21:8.62:0,9,229	0/0:33,0:33:32.41:0,32,328	0/0:31,0:31:61.40:0,61,343	0/0:27,0:27:32.73:0,33,268	1/1:7,25:32:65.59:954,66,0	0/0:26,0:25:58.44:0,58,306	1/1:1,10:11:24.08:312,24,0	0/0:31,0:30:41.03:0,41,309	0/0:44,0:44:99:0,106,590	0/0:27,0:27:13.16:0,13,224	0/0:32,0:32:61.23:0,61,425	0/0:19,0:19:34.95:0,35,202	0/0:20,0:20:56.72:0,57,286	1/1:1,27:28:75.14:932,75,0	0/0:41,0:41:37.39:0,37,393	0/0:25,0:25:62.27:0,62,350	0/0:10,0:10:28.75:0,29,157
chr10	9028369	.	A	AAT	1006.17	PASS	AB=0.909;AC=40;AF=0.909;AN=44;BaseQRankSum=-1.955;DP=81;FS=4.759;HRun=0;HaplotypeScore=36.3271;InbreedingCoeff=-0.0565;MQ=115.59;MQ0=0;MQRankSum=-2.681;QD=14.37;ReadPosRankSum=-2.422;VQSLOD=1.9466;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:4:2.97:20,3,0	1/1:3,0:3:5.99:63,6,0	0/1:7,0:9:13.41:13,0,62	0/1:6,0:6:15.34:35,0,15	1/1:2,0:2:5.95:42,6,0	1/1:2,0:2:5.96:45,6,0	1/1:2,0:2:5.93:40,6,0	1/1:2,0:2:6:54,6,0	1/1:3,0:3:8.90:60,9,0	1/1:0,5:5:15.04:223,15,0	1/1:2,0:2:5.95:42,6,0	1/1:1,0:1:2.97:20,3,0	1/1:0,1:3:3.01:37,3,0	1/1:2,0:2:3:25,3,0	1/1:5,0:5:5.96:45,6,0	./.	./.	./.	1/1:2,0:2:2.99:24,3,0	1/1:0,2:3:3.01:36,3,0	0/0:6,0:6:0.63:0,1,2	1/1:3,0:3:3:25,3,0	1/1:4,0:4:8.97:71,9,0	./.	1/1:1,1:2:5.99:58,6,0	1/1:5,0:5:12.01:125,12,0	./.	./.
chr10	9034905	.	T	TG	4142.26	PASS	AB=0.982;AC=48;AF=0.857;AN=56;BaseQRankSum=5.349;DP=449;FS=4.246;HRun=1;HaplotypeScore=85.7102;InbreedingCoeff=0.2739;MQ=77.84;MQ0=0;MQRankSum=-1.970;QD=9.91;ReadPosRankSum=7.296;VQSLOD=1.4151;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:17,1:18:5.75:177,6,0	1/1:7,0:7:1.04:70,1,0	0/0:14,0:12:42.03:0,42,460	0/0:16,0:16:44.54:0,45,510	1/1:18,2:20:13.49:163,13,0	1/1:27,0:27:44.77:260,45,0	1/1:14,0:14:16.90:167,17,0	1/1:32,1:33:0.52:184,1,0	1/1:15,0:15:36.88:200,37,0	1/1:17,1:18:8.57:148,9,0	0/1:14,0:14:12.57:113,0,13	1/1:21,0:21:41.10:296,41,0	1/1:11,0:11:25.63:140,26,0	1/1:19,0:19:0.95:176,1,0	0/1:16,0:16:9.39:162,0,9	1/1:22,0:22:7.27:217,7,0	1/1:12,0:12:30.78:154,31,0	1/1:5,0:5:10.78:46,11,0	1/1:19,0:19:19.33:169,19,0	1/1:27,1:28:41.08:363,41,0	0/1:7,0:7:0.87:56,0,1	1/1:15,0:15:7.06:148,7,0	0/1:12,1:13:27.35:94,0,27	1/1:10,0:10:16.34:77,16,0	1/1:16,0:16:4.33:148,4,0	1/1:15,0:15:40.37:183,40,0	1/1:19,0:19:22.35:180,22,0	1/1:4,0:4:10.80:51,11,0
chr10	9034906	.	G	GT	12197.32	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-4.072;DP=458;FS=4.136;HRun=7;HaplotypeScore=62.7339;InbreedingCoeff=0.9566;MQ=78.26;MQ0=0;MQRankSum=-8.318;QD=28.63;ReadPosRankSum=2.585;VQSLOD=5.7264;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,14:19:44.94:505,45,0	1/1:1,7:8:18.06:217,18,0	0/0:15,0:13:30.03:0,30,282	0/0:17,0:16:39.28:0,39,396	1/1:6,14:20:39.43:398,39,0	1/1:4,21:26:62.93:690,63,0	1/1:2,12:14:39.08:454,39,0	1/1:6,26:32:78.24:942,78,0	1/1:1,14:15:45.06:512,45,0	1/1:5,14:19:45.10:527,45,0	1/1:3,11:14:33.03:366,33,0	1/1:2,19:21:57.17:688,57,0	1/1:1,11:12:30.05:346,30,0	1/1:2,16:19:50.94:561,51,0	1/1:3,14:17:39.12:471,39,0	1/1:4,19:24:57:650,57,0	1/1:0,13:13:36.07:418,36,0	1/1:0,5:5:12.04:145,12,0	1/1:5,14:19:51.12:584,51,0	1/1:3,25:28:75.23:902,75,0	1/1:1,6:7:18.01:201,18,0	1/1:3,13:16:39.09:455,39,0	1/1:6,7:13:21.49:238,21,0	1/1:0,10:10:21.02:237,21,0	1/1:3,13:16:39.09:456,39,0	1/1:1,15:16:45.14:541,45,0	1/1:1,18:19:48.07:548,48,0	1/1:0,4:4:12.04:145,12,0
chr10	9035297	.	T	TG	30083.42	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-10.411;DP=720;FS=11.282;HRun=0;HaplotypeScore=60.6682;InbreedingCoeff=0.9917;MQ=86.09;MQ0=0;MQRankSum=-11.670;QD=44.90;ReadPosRankSum=8.121;VQSLOD=3.0884;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,23:23:60.20:959,60,0	1/1:0,11:11:33.11:528,33,0	0/0:29,0:29:83.93:0,84,1104	0/0:21,0:21:63.19:0,63,852	1/1:0,35:35:99:1679,105,0	1/1:1,31:32:93.32:1486,93,0	1/1:0,28:28:78.27:1247,78,0	1/1:3,37:40:99:1815,114,0	1/1:0,24:24:72.25:1151,72,0	1/1:1,24:25:72.24:1138,72,0	1/1:0,32:32:81.28:1295,81,0	1/1:1,33:34:93.32:1479,93,0	1/1:0,37:37:99:1725,108,0	1/1:1,26:27:72.25:1144,72,0	1/1:0,24:24:69.24:1103,69,0	1/1:0,32:32:90.31:1439,90,0	1/1:1,24:25:69.24:1103,69,0	1/1:2,18:20:45.15:719,45,0	1/1:0,24:24:72.24:1121,72,0	1/1:0,21:22:66.22:1037,66,0	1/1:0,26:26:75.26:1199,75,0	1/1:0,24:24:69.24:1103,69,0	1/1:1,15:16:42.14:671,42,0	1/1:1,20:21:57.19:911,57,0	1/1:0,15:15:45.15:720,45,0	1/1:0,34:34:99:1584,99,0	1/1:0,32:31:93.32:1487,93,0	1/1:0,6:6:15.05:240,15,0
chr10	9035512	.	TC	T	2564.58	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=3.229;DP=611;FS=4.479;HRun=6;HaplotypeScore=159.5829;InbreedingCoeff=0.9874;MQ=76.31;MQ0=0;MQRankSum=0.618;QD=25.39;ReadPosRankSum=1.751;VQSLOD=1.7333;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:81.23:0,81,989	0/0:14,0:14:10.24:0,10,432	0/0:22,0:19:40.85:0,41,407	0/0:17,0:17:27.89:0,28,280	0/0:23,0:23:64.04:0,64,732	0/0:18,0:18:48.13:0,48,562	0/0:24,0:24:66.14:0,66,742	0/0:35,0:35:72.12:0,72,799	0/0:25,0:25:73.41:0,73,840	1/1:2,24:26:72.01:704,72,0	1/1:2,21:23:63.09:662,63,0	0/0:21,0:21:54.61:0,55,616	0/0:18,0:18:26.20:0,26,487	0/0:20,0:20:54.13:0,54,618	1/1:1,27:28:69.15:730,69,0	0/0:24,1:25:31.73:0,32,660	0/0:27,0:27:72.63:0,73,826	0/0:15,0:15:41.98:0,42,448	0/0:37,0:37:90.23:0,90,1039	0/0:26,0:26:75.19:0,75,880	0/0:14,0:14:30.04:0,30,325	0/0:16,0:16:45.10:0,45,506	1/1:0,15:15:39.10:419,39,0	1/1:1,8:9:21.05:225,21,0	0/0:19,0:19:50.65:0,51,590	0/0:24,0:24:70.44:0,70,825	0/0:31,0:31:82.78:0,83,965	0/0:8,0:8:24.08:0,24,298
chr10	9038827	.	AC	A	28343.32	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=1.188;DP=805;FS=14.389;HRun=1;HaplotypeScore=104.3071;InbreedingCoeff=0.9989;MQ=87.16;MQ0=2;MQRankSum=-12.073;QD=37.94;ReadPosRankSum=6.817;VQSLOD=3.0983;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,48:48:99:1740,126,0	1/1:0,17:17:48.16:671,48,0	0/0:35,0:35:99:0,102,1596	0/0:23,0:23:66.19:0,66,1014	1/1:0,35:35:93.31:1301,93,0	1/1:0,20:20:48.16:671,48,0	1/1:1,17:17:51.17:713,51,0	1/1:1,24:24:69.16:893,69,0	1/1:0,28:28:78.26:1085,78,0	1/1:1,39:40:99:1552,111,0	1/1:0,25:25:63.17:859,63,0	1/1:0,31:31:84.28:1175,84,0	1/1:0,43:43:99:1803,129,0	1/1:0,28:28:72.24:1007,72,0	1/1:0,28:28:75.25:1049,75,0	1/1:0,26:26:75.25:1049,75,0	1/1:0,33:33:84.28:1174,84,0	1/1:0,19:19:54.18:755,54,0	1/1:0,24:24:72.22:974,72,0	1/1:1,31:32:81.24:1112,81,0	1/1:0,31:31:84.28:1175,84,0	1/1:1,34:35:99:1376,99,0	1/1:0,32:32:87.29:1216,87,0	1/1:0,22:22:57.19:797,57,0	1/1:0,33:33:81.27:1133,81,0	1/1:0,37:37:99:1553,111,0	1/1:0,29:29:84.28:1175,84,0	1/1:0,8:8:24.08:336,24,0
chr10	9039835	.	AG	A	7463.53	PASS	AB=1.000;AC=51;AF=0.911;AN=56;BaseQRankSum=7.491;DP=702;FS=3.713;HRun=1;HaplotypeScore=123.3979;InbreedingCoeff=0.7396;MQ=85.68;MQ0=0;MQRankSum=-8.468;QD=11.41;ReadPosRankSum=7.782;VQSLOD=3.0584;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:36,0:36:51.66:268,52,0	1/1:7,0:7:20.02:102,20,0	0/0:25,0:25:75.24:0,75,1157	0/0:21,1:23:28.45:0,28,871	1/1:24,0:24:48.91:259,49,0	1/1:29,0:29:32.84:274,33,0	1/1:22,0:22:35.59:250,36,0	1/1:33,0:33:62.25:406,62,0	1/1:26,0:26:69.64:406,70,0	1/1:27,2:29:42.27:309,42,0	1/1:16,0:16:22.96:119,23,0	1/1:20,0:20:57.35:302,57,0	1/1:27,0:27:28.37:341,28,0	1/1:29,0:29:26.44:342,26,0	1/1:32,0:32:59.56:408,60,0	1/1:28,0:28:77.41:407,77,0	1/1:30,0:30:80.39:425,80,0	1/1:9,1:10:23.52:167,24,0	1/1:15,0:15:17.27:140,17,0	1/1:31,0:31:18.20:192,18,0	1/1:32,0:32:39.39:291,39,0	1/1:26,0:26:54.57:291,55,0	1/1:19,0:18:6.68:122,7,0	1/1:27,0:27:45.22:334,45,0	1/1:27,0:27:56.93:286,57,0	1/1:28,0:28:50:320,50,0	1/1:44,0:44:99:661,107,0	0/1:7,0:7:32.55:43,0,33
chr10	9039836	.	GT	G	20415.30	PASS	AB=0.538;AC=51;AF=0.911;AN=56;BaseQRankSum=0.598;DP=693;FS=0.572;HRun=2;HaplotypeScore=77.3448;InbreedingCoeff=0.7776;MQ=84.93;MQ0=0;MQRankSum=-10.107;QD=31.55;ReadPosRankSum=4.249;VQSLOD=4.6238;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,36:36:57.13:720,57,0	1/1:0,7:7:21.07:273,21,0	0/0:23,0:23:69.22:0,69,981	0/0:23,0:23:37.65:0,38,813	1/1:0,24:24:51.17:662,51,0	1/1:0,28:28:57.19:739,57,0	1/1:1,21:22:60.19:779,60,0	1/1:0,32:32:96.30:1228,96,0	1/1:0,26:26:72.23:934,72,0	1/1:12,17:29:84.15:1013,84,0	1/1:0,16:16:24.08:312,24,0	1/1:0,20:20:60.19:778,60,0	1/1:0,25:25:72.23:932,72,0	1/1:1,27:28:72.23:934,72,0	1/1:1,31:32:84.27:1090,84,0	1/1:0,28:28:81.26:1051,81,0	1/1:0,30:30:84.27:1090,84,0	1/1:1,9:10:24.07:300,24,0	1/1:1,14:15:42.12:522,42,0	1/1:1,30:31:53.90:616,54,0	1/1:1,31:32:63.20:818,63,0	1/1:0,26:26:60.11:756,60,0	1/1:1,18:18:30.10:390,30,0	1/1:0,26:26:69.22:895,69,0	1/1:0,27:27:60.19:779,60,0	1/1:0,27:27:81.22:1032,81,0	1/1:0,44:44:99:1632,126,0	0/1:1,6:7:29.80:141,0,30
chr10	9039980	.	T	TC	20988.67	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=2.053;DP=618;FS=1.161;HRun=3;HaplotypeScore=111.2153;InbreedingCoeff=0.9563;MQ=88.06;MQ0=0;MQRankSum=-11.288;QD=37.15;ReadPosRankSum=5.844;VQSLOD=3.7779;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,22:23:57.19:797,57,0	1/1:0,12:12:36.12:504,36,0	0/0:29,0:29:71.06:0,71,920	0/0:24,0:24:63.18:0,63,740	1/1:3,23:26:63.20:865,63,0	1/1:4,19:23:63.17:857,63,0	1/1:6,21:26:75.19:1008,75,0	1/1:1,25:26:75.24:1034,75,0	1/1:1,19:20:57.19:797,57,0	1/1:1,30:29:84.28:1175,84,0	1/1:2,16:18:48.16:670,48,0	1/1:1,20:21:60.20:832,60,0	1/1:0,26:26:75.25:1043,75,0	1/1:2,14:16:9.15:552,9,0	1/1:1,27:28:78.26:1092,78,0	1/1:1,12:13:33.11:462,33,0	1/1:5,18:23:54.03:747,54,0	1/1:1,15:16:48.12:646,48,0	1/1:5,12:17:39.13:546,39,0	1/1:3,28:31:87.27:1197,87,0	1/1:3,12:15:39.02:544,39,0	1/1:3,30:33:90.30:1259,90,0	1/1:4,21:24:60.20:835,60,0	1/1:3,11:14:39.11:526,39,0	1/1:3,11:14:36.11:487,36,0	1/1:4,28:32:81.27:1131,81,0	1/1:3,28:31:87.29:1217,87,0	1/1:0,4:4:12.04:168,12,0
chr10	9040025	.	T	TA	16968.23	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=5.355;DP=626;FS=11.852;HRun=7;HaplotypeScore=142.9797;InbreedingCoeff=0.9812;MQ=75.52;MQ0=0;MQRankSum=-8.434;QD=28.61;ReadPosRankSum=4.088;VQSLOD=3.1825;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,22:27:60.18:725,60,0	1/1:2,7:9:21.06:254,21,0	0/0:14,0:14:30.04:0,30,289	0/0:19,0:19:44.89:0,45,421	1/1:1,19:20:54.17:651,54,0	1/1:4,19:23:51.11:599,51,0	1/1:4,24:28:69.21:833,69,0	1/1:10,31:41:99:1300,111,0	1/1:5,13:18:39.12:471,39,0	1/1:9,29:36:81.21:941,81,0	1/1:0,16:16:39.08:453,39,0	1/1:3,20:23:57.17:688,57,0	1/1:2,22:24:54.17:652,54,0	1/1:2,17:19:54.17:652,54,0	1/1:14,11:25:48.11:547,48,0	1/1:2,17:19:51.16:616,51,0	1/1:3,20:23:60.18:724,60,0	1/1:1,10:11:30.09:362,30,0	1/1:4,18:22:54.17:652,54,0	1/1:1,39:40:99:1309,111,0	1/1:3,9:12:30.09:362,30,0	1/1:7,22:29:66.20:795,66,0	1/1:1,19:19:51.12:600,51,0	1/1:2,14:16:30.09:362,30,0	1/1:2,19:21:45.14:543,45,0	1/1:3,28:31:81.21:942,81,0	1/1:12,20:32:69.13:790,69,0	1/1:0,6:6:12.04:145,12,0
chr10	9040128	.	TA	T	17479.75	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=6.502;DP=606;FS=0.000;HRun=4;HaplotypeScore=126.2245;InbreedingCoeff=0.9853;MQ=77.40;MQ0=4;MQRankSum=-10.278;QD=31.10;ReadPosRankSum=4.764;VQSLOD=3.5020;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,31:36:93.28:1113,93,0	1/1:1,11:12:33.10:395,33,0	0/0:26,0:26:69.23:0,69,960	0/0:18,0:18:45.11:0,45,596	1/1:3,21:23:57.14:655,57,0	1/1:3,22:25:63.19:755,63,0	1/1:4,21:24:69.20:814,69,0	1/1:3,31:34:93.28:1105,93,0	1/1:0,12:12:36.11:431,36,0	1/1:1,22:23:66.20:790,66,0	1/1:4,19:23:54.15:636,54,0	1/1:1,14:15:42.13:503,42,0	1/1:4,19:23:60.17:708,60,0	1/1:1,18:19:57.15:669,57,0	1/1:0,24:24:69.21:827,69,0	1/1:1,12:13:33.10:395,33,0	1/1:3,12:15:33.06:380,33,0	1/1:1,7:7:18.05:216,18,0	1/1:5,22:27:81.17:922,81,0	1/1:2,36:38:96.28:1139,96,0	1/1:2,17:18:39.12:468,39,0	1/1:3,24:26:75.21:887,75,0	1/1:2,21:23:63.19:755,63,0	1/1:3,12:14:21.06:251,21,0	1/1:0,17:16:48.15:575,48,0	1/1:3,34:37:99:1267,108,0	1/1:1,18:18:54.17:646,54,0	1/1:0,6:6:15.05:180,15,0
chr10	9040171	.	T	TA	22738.96	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-2.944;DP=583;FS=0.000;HRun=0;HaplotypeScore=96.0608;InbreedingCoeff=0.9950;MQ=71.21;MQ0=0;MQRankSum=-8.601;QD=40.90;ReadPosRankSum=3.164;VQSLOD=5.1777;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,35:35:93.27:1414,93,0	1/1:1,6:7:21.06:312,21,0	0/0:15,0:15:43.34:0,43,558	0/0:12,0:12:32.43:0,32,391	1/1:1,24:25:60.20:954,60,0	1/1:1,21:22:66.22:1039,66,0	1/1:0,30:29:87.23:1349,87,0	1/1:4,28:32:96.29:1452,96,0	1/1:1,15:16:39.13:603,39,0	1/1:1,28:29:78.27:1244,78,0	1/1:1,13:14:36.09:547,36,0	1/1:2,20:22:54.18:848,54,0	1/1:2,28:30:87.21:1324,87,0	1/1:0,20:20:54.18:850,54,0	1/1:1,22:23:63.21:993,63,0	1/1:0,19:19:51.10:784,51,0	1/1:0,11:11:30.10:478,30,0	1/1:0,13:12:36.12:574,36,0	1/1:0,20:20:60.20:958,60,0	1/1:0,29:29:69.01:1009,69,0	1/1:1,9:10:23.99:323,24,0	1/1:0,26:26:66.14:1001,66,0	1/1:8,12:20:54.06:739,54,0	1/1:2,14:15:32.62:502,33,0	1/1:1,21:21:60.04:875,60,0	1/1:0,31:31:90.31:1417,90,0	1/1:1,22:23:54.18:861,54,0	1/1:5,4:9:24.02:289,24,0
chr10	9040636	.	AGCAGCACCATTTCAGTACAGGTG	A	36634.73	PASS	AB=0.967;AC=42;AF=0.778;AN=54;BaseQRankSum=8.918;DP=422;FS=1.745;HRun=0;HaplotypeScore=312.4876;InbreedingCoeff=0.2646;MQ=98.62;MQ0=0;MQRankSum=-11.749;QD=103.20;ReadPosRankSum=10.744;VQSLOD=3.0930;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:13:24:1012,24,0	1/1:6,0:6:18.04:970,18,0	0/0:31,0:31:90.30:0,90,5416	0/0:29,0:29:84.07:0,84,5294	1/1:15,0:15:23.95:1366,24,0	0/1:23,0:22:99:2047,0,125	1/1:12,0:12:18.06:1072,18,0	1/1:16,0:16:9.03:432,9,0	1/1:11,0:11:21.07:1319,21,0	0/1:11,0:11:99:1488,0,140	0/1:21,7:28:99:2148,0,121	1/1:13,0:13:18.06:973,18,0	0/1:21,0:21:99:2579,0,125	1/1:11,0:11:18.06:1136,18,0	1/1:26,0:26:45.15:2833,45,0	1/1:19,0:18:39.13:2322,39,0	1/1:6,0:6:9.03:503,9,0	./.	1/1:14,0:14:21.07:1326,21,0	1/1:18,3:21:39.13:2400,39,0	0/0:5,0:5:3.01:0,3,102	1/1:11,0:11:21.07:1326,21,0	1/1:8,0:8:18.06:1093,18,0	0/1:9,0:9:99:361,0,155	1/1:18,0:18:33.11:2084,33,0	1/1:19,0:19:45.14:2678,45,0	0/1:22,0:21:99:2979,0,122	1/1:2,0:2:3.01:189,3,0
chr10	9040637	.	GC	G	4245.34	PASS	AC=50;AF=0.926;AN=54;BaseQRankSum=11.452;DP=308;FS=2.595;HRun=1;HaplotypeScore=224.1679;InbreedingCoeff=0.7659;MQ=114.84;MQ0=0;MQRankSum=-11.556;QD=17.26;ReadPosRankSum=8.272;VQSLOD=4.7012;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,5:9:26.83:197,27,0	1/1:1,5:6:17.80:119,18,0	0/0:31,0:31:87.02:0,87,1308	0/0:30,0:30:83.31:0,83,1284	1/1:0,13:13:17:104,17,0	1/1:1,11:12:35.69:253,36,0	1/1:3,6:9:17.61:126,18,0	1/1:1,2:3:8.96:68,9,0	1/1:2,7:9:26.68:187,27,0	1/1:1,8:9:26.85:201,27,0	1/1:8,13:22:36.82:258,37,0	1/1:2,5:7:18.75:130,19,0	1/1:2,14:16:41.44:260,41,0	1/1:2,6:8:21.29:147,21,0	1/1:1,15:16:45.20:296,45,0	1/1:2,12:14:41.05:280,41,0	1/1:0,3:3:5.93:40,6,0	1/1:1,0:1:0.47:1,0,0	1/1:1,7:8:21.77:155,22,0	1/1:4,12:16:35.75:224,36,0	./.	1/1:0,8:8:20.75:139,21,0	1/1:1,6:7:17.79:118,18,0	1/1:0,5:5:8.73:63,9,0	1/1:1,11:12:34.35:219,34,0	1/1:1,14:15:44.46:307,44,0	1/1:1,16:17:49.58:331,50,0	1/1:0,1:1:2.98:22,3,0
chr10	9040639	.	AGCACCATTTCAGTACAGGTGGG	A	31777.19	PASS	AB=0.559;AC=33;AF=0.611;AN=54;BaseQRankSum=11.591;DP=309;FS=1.592;HRun=0;HaplotypeScore=263.4751;InbreedingCoeff=-0.2087;MQ=117.84;MQ0=0;MQRankSum=-12.736;QD=131.31;ReadPosRankSum=11.837;VQSLOD=3.2486;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:4,5:9:99:833,0,164	0/1:2,5:7:99:818,0,186	0/0:35,0:35:99:0,102,5641	0/0:29,0:29:83.98:0,84,5302	1/1:0,13:13:23.95:1179,24,0	0/1:2,11:13:99:1797,0,366	1/1:1,6:7:18.06:937,18,0	1/1:1,2:3:9.03:376,9,0	0/1:1,7:8:99:1142,0,164	0/1:1,8:9:99:1319,0,170	0/1:10,12:22:99:1858,0,338	1/1:1,5:6:18.06:842,18,0	0/1:1,14:16:99:2231,0,158	1/1:0,6:6:18.06:1002,18,0	0/1:1,15:16:99:2446,0,156	0/1:2,12:14:99:1985,0,146	0/1:1,3:4:99:424,0,114	./.	0/1:1,7:8:99:1156,0,187	1/1:3,12:15:39.13:2085,39,0	0/0:3,0:3:9.03:0,9,533	1/1:0,8:8:21.07:1166,21,0	0/1:1,6:7:99:934,0,183	0/1:2,3:5:99:317,0,189	0/1:2,11:13:99:1792,0,169	1/1:1,14:15:44.89:2348,45,0	0/1:0,16:17:99:2622,0,153	1/1:0,1:1:3.01:168,3,0
chr10	9041414	.	CA	C	22140.15	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=2.239;DP=765;FS=0.000;HRun=4;HaplotypeScore=144.6227;InbreedingCoeff=0.9878;MQ=91.43;MQ0=0;MQRankSum=-11.886;QD=31.54;ReadPosRankSum=7.606;VQSLOD=2.4273;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,47:50:99:1365,114,0	1/1:1,6:7:15.04:178,15,0	0/0:32,0:32:87.22:0,87,1122	0/0:31,0:31:74.95:0,75,1063	1/1:1,34:35:96.29:1149,96,0	1/1:1,24:25:66.20:791,66,0	1/1:2,21:23:51.16:611,51,0	1/1:2,27:29:81.21:957,81,0	1/1:1,26:27:72.22:860,72,0	1/1:0,28:28:81.24:961,81,0	1/1:1,30:31:78.23:927,78,0	1/1:0,23:23:69.21:827,69,0	1/1:0,34:34:87.27:1042,87,0	1/1:2,31:33:81.25:970,81,0	1/1:1,33:34:93.29:1115,93,0	1/1:0,38:38:99:1223,102,0	1/1:0,25:25:69.21:827,69,0	1/1:0,20:20:60.18:719,60,0	1/1:3,15:18:45.12:529,45,0	1/1:1,21:22:63.19:753,63,0	1/1:1,42:43:99:1403,117,0	1/1:1,20:21:54.16:648,54,0	1/1:0,31:31:81.24:967,81,0	1/1:1,20:21:54.16:644,54,0	1/1:1,20:21:45.14:539,45,0	1/1:0,30:30:90.25:1054,90,0	1/1:0,26:26:72.22:863,72,0	1/1:0,7:7:18.06:216,18,0
chr10	9041889	.	C	CGTT	34708.25	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-7.675;DP=659;FS=1.310;HRun=0;HaplotypeScore=76.9257;InbreedingCoeff=0.9944;MQ=82.92;MQ0=0;MQRankSum=-10.421;QD=56.44;ReadPosRankSum=5.547;VQSLOD=7.1174;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,14:15:39.13:898,39,0	1/1:3,4:9:17.83:312,18,0	0/0:22,0:22:54.13:0,54,816	0/0:22,0:22:63.19:0,63,1038	1/1:1,20:21:39.09:848,39,0	1/1:0,30:31:75.26:1728,75,0	1/1:3,18:22:60.16:1330,60,0	1/1:6,40:47:99:2798,129,0	1/1:3,27:30:81.23:1816,81,0	1/1:2,26:29:81.28:1819,81,0	1/1:1,21:23:60.21:1377,60,0	1/1:3,16:19:45.15:1036,45,0	1/1:3,40:43:99:2506,111,0	1/1:2,28:30:72.20:1602,72,0	1/1:2,30:32:81.28:1866,81,0	1/1:1,17:18:51.14:1126,51,0	1/1:2,10:12:27.09:621,27,0	1/1:2,13:16:36.12:830,36,0	1/1:3,11:15:39.10:838,39,0	1/1:0,27:28:78.23:1746,78,0	1/1:4,20:24:47.98:1057,48,0	1/1:3,20:23:60.12:1324,60,0	1/1:0,14:16:42.14:965,42,0	1/1:2,15:18:45.05:1037,45,0	1/1:2,25:27:63.22:1449,63,0	1/1:1,24:26:72.24:1567,72,0	1/1:1,28:31:69.24:1591,69,0	1/1:0,10:10:27.09:622,27,0
chr10	9042005	.	A	AAT	27537	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-6.230;DP=547;FS=9.926;HRun=0;HaplotypeScore=61.5636;InbreedingCoeff=0.9785;MQ=79.82;MQ0=2;MQRankSum=-9.600;QD=53.78;ReadPosRankSum=5.631;VQSLOD=5.1468;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,13:13:33.11:670,33,0	1/1:1,7:9:18.06:366,18,0	0/0:21,0:21:63.18:0,63,966	0/0:13,0:14:36.04:0,36,549	1/1:2,32:34:93.30:1865,93,0	1/1:0,20:20:60.21:1218,60,0	1/1:1,22:23:54.19:1096,54,0	1/1:2,37:40:99:2329,120,0	1/1:0,22:22:57.20:1151,57,0	1/1:2,26:29:81.28:1634,81,0	1/1:0,12:12:33.11:659,33,0	1/1:0,22:22:60.21:1218,60,0	1/1:1,27:30:72.25:1461,72,0	1/1:2,14:16:45.15:898,45,0	1/1:0,25:24:66.23:1340,66,0	1/1:1,18:20:57.20:1151,57,0	1/1:0,11:12:30.10:609,30,0	1/1:0,18:18:48.16:975,48,0	1/1:0,19:19:57.20:1125,57,0	1/1:0,22:22:60.21:1211,60,0	1/1:0,12:12:33.11:670,33,0	1/1:0,12:12:33.11:670,33,0	1/1:1,20:23:60.16:1178,60,0	1/1:0,9:9:24.08:488,24,0	1/1:0,15:16:39.13:791,39,0	1/1:1,23:23:69.24:1362,69,0	1/1:0,23:25:57.20:1158,57,0	1/1:0,5:5:12.04:243,12,0
chr10	9042184	.	ATTTG	A	10790.30	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=6.716;DP=486;FS=39.978;HRun=0;HaplotypeScore=208.3510;InbreedingCoeff=0.7273;MQ=60.40;MQ0=0;MQRankSum=-7.550;QD=25.51;ReadPosRankSum=2.059;VQSLOD=2.7719;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,25:27:41.78:650,42,0	1/1:0,10:10:18.06:343,18,0	0/0:20,0:17:39.11:0,39,932	0/0:23,0:20:50.97:0,51,991	1/1:1,19:20:1.97:57,2,0	1/1:1,11:12:17.99:308,18,0	1/1:0,13:13:17.84:267,18,0	1/1:7,18:25:54.14:988,54,0	1/1:2,8:10:8.96:134,9,0	1/1:2,15:18:45.15:853,45,0	1/1:3,19:22:11.66:149,12,0	1/1:3,14:17:35.91:539,36,0	1/1:0,21:21:36.01:590,36,0	1/1:2,13:16:20.91:365,21,0	1/1:1,19:20:20.85:284,21,0	1/1:1,17:18:27.02:475,27,0	1/1:0,11:11:14.83:247,15,0	1/1:1,11:12:33.04:598,33,0	1/1:2,8:10:24.08:434,24,0	1/1:1,37:38:38.59:512,39,0	0/0:1,9:10:0:0,0,0	1/1:1,12:13:11.77:191,12,0	1/1:0,15:15:8.88:134,9,0	0/0:0,10:10:0.94:0,1,2	1/1:6,24:30:32.68:556,33,0	1/1:2,18:20:54.16:1001,54,0	1/1:3,19:22:57.13:1059,57,0	1/1:1,2:3:5.95:56,6,0
chr10	9042204	.	CTCTGTGTGTG	C	5536.37	PASS	AB=0.872;AC=36;AF=0.643;AN=56;BaseQRankSum=3.457;DP=444;FS=1.402;HRun=0;HaplotypeScore=236.2158;InbreedingCoeff=0.3679;MQ=41.37;MQ0=18;MQRankSum=-3.973;QD=17.36;ReadPosRankSum=2.895;VQSLOD=3.9618;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:21,1:22:10.27:76,10,0	1/1:5,2:8:11.97:260,12,0	0/0:29,0:12:12.28:0,12,200	0/1:22,0:9:22.27:22,0,40	1/1:14,1:18:0.20:1,0,0	1/1:10,0:10:5.95:57,6,0	0/1:15,0:13:11.23:26,0,11	1/1:17,0:17:38.01:260,38,0	0/1:6,0:8:11.97:12,0,40	0/0:17,0:17:40.69:0,41,630	0/0:19,0:19:12.04:0,12,249	1/1:8,7:14:27.54:426,28,0	1/1:12,4:16:26.83:555,27,0	1/1:8,6:14:17.95:330,18,0	0/0:21,0:21:17.98:0,18,691	0/1:10,1:15:32.15:183,0,32	1/1:8,2:10:14.80:144,15,0	1/1:10,0:11:1.28:169,1,0	1/1:9,0:9:24.33:258,24,0	1/1:24,10:34:36.05:795,36,0	0/0:13,0:12:3.48:0,3,62	1/1:8,3:11:9.03:111,9,0	0/0:12,0:12:0.47:0,0,1	0/0:14,0:14:6.02:0,6,322	0/1:18,1:22:8.21:132,0,8	0/1:12,1:15:17.66:484,0,18	1/1:12,11:22:61.49:1034,61,0	1/1:0,2:2:6.02:201,6,0
chr10	9042206	.	CTGTG	C	866.33	PASS	AB=1.000;AC=31;AF=0.596;AN=52;BaseQRankSum=4.516;DP=445;FS=5.057;HRun=0;HaplotypeScore=222.1706;InbreedingCoeff=0.2454;MQ=39.68;MQ0=20;MQRankSum=-3.121;QD=3.01;ReadPosRankSum=2.842;VQSLOD=2.4055;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:23:2.84:14,3,0	1/1:8,0:8:6.01:56,6,0	./.	./.	0/0:19,0:19:2.93:0,3,27	0/0:9,0:9:4.66:0,5,19	0/1:15,0:13:0:0,0,0	0/0:15,0:15:3:0,3,27	0/1:10,0:10:13.01:13,0,56	1/1:15,2:17:6.01:93,6,0	1/1:16,1:19:5.93:40,6,0	1/1:15,0:14:9.90:85,10,0	1/1:15,0:15:12.01:109,12,0	0/1:13,0:13:5.52:47,0,6	0/0:20,0:21:17:0,17,334	1/1:14,0:14:8.37:62,8,0	1/1:10,0:10:0.30:1,0,0	0/1:11,0:11:15.99:16,0,68	1/1:10,0:9:0.30:24,0,0	1/1:34,0:34:14.90:99,15,0	0/0:15,0:14:3.45:0,3,22	0/1:11,0:11:0:0,0,0	0/0:12,0:12:0:0,0,0	0/0:14,0:15:5.85:0,6,141	0/1:20,0:20:43.43:43,0,55	1/1:14,1:15:14.82:144,15,0	0/1:23,0:22:25.45:109,0,25	1/1:4,0:3:6.01:56,6,0
chr10	9043158	.	TA	T	224.93	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.223;DP=588;FS=6.475;HRun=6;HaplotypeScore=171.6009;InbreedingCoeff=0.8556;MQ=67.40;MQ0=0;MQRankSum=-3.734;QD=20.45;ReadPosRankSum=0.538;VQSLOD=1.7586;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:43:99:0,120,1478	0/0:11,0:11:30.09:0,30,379	0/0:15,1:15:4.04:0,4,399	0/0:10,0:8:17.89:0,18,210	0/0:32,0:32:84.26:0,84,1041	0/0:25,0:25:69.21:0,69,854	0/0:18,0:18:42.13:0,42,533	0/0:29,0:29:72.16:0,72,848	1/1:1,10:11:30.08:319,30,0	0/0:29,0:29:81.26:0,81,1038	0/0:23,0:23:57.18:0,57,733	0/0:19,0:19:39.11:0,39,466	0/0:27,0:27:66.20:0,66,816	0/0:14,0:14:39.12:0,39,489	0/0:21,0:21:51.15:0,51,620	0/0:20,0:20:51.16:0,51,647	0/0:26,0:26:57.18:0,57,721	0/0:16,0:16:45.10:0,45,567	0/0:12,0:12:33.07:0,33,404	0/0:25,0:25:69.18:0,69,847	0/0:1,0:11:19.46:0,19,70	0/0:12,0:12:33.06:0,33,387	0/0:21,0:21:51.15:0,51,625	0/0:19,0:19:42.13:0,42,526	0/0:41,0:41:93.27:0,93,1152	0/0:21,0:21:60.19:0,60,760	0/0:27,0:27:72.22:0,72,893	0/0:8,0:8:21.07:0,21,270
chr10	9043168	.	ATAAC	A	23156.41	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-0.971;DP=583;FS=4.405;HRun=0;HaplotypeScore=121.9336;InbreedingCoeff=0.8752;MQ=72.35;MQ0=0;MQRankSum=-7.717;QD=41.87;ReadPosRankSum=5.502;VQSLOD=5.2420;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,40:46:99:1852,102,0	1/1:2,11:13:30.10:542,30,0	0/0:16,0:15:33.47:0,33,662	0/0:14,0:13:1.64:0,2,490	1/1:2,31:33:84.13:1387,84,0	1/1:2,23:25:63.22:1145,63,0	1/1:0,18:18:48.08:818,48,0	1/1:3,25:28:72.20:1202,72,0	1/1:0,10:10:30.10:542,30,0	1/1:0,28:28:81.28:1451,81,0	1/1:1,22:23:57.19:980,57,0	1/1:2,17:19:33.11:599,33,0	1/1:2,25:27:54.19:981,54,0	1/1:0,14:14:36.12:654,36,0	1/1:2,21:23:45.15:818,45,0	1/1:1,19:20:48.16:873,48,0	1/1:3,16:19:39.13:709,39,0	1/1:3,12:15:30.10:544,30,0	1/1:0,13:13:39.10:662,39,0	1/1:0,23:23:57.16:984,57,0	1/1:2,9:11:30.10:535,30,0	1/1:0,14:14:30.02:476,30,0	1/1:2,18:20:42.14:745,42,0	1/1:2,15:17:39.13:706,39,0	1/1:1,36:37:90.31:1636,90,0	1/1:3,19:22:57.18:1006,57,0	1/1:6,21:27:51.17:927,51,0	1/1:0,8:8:21.07:382,21,0
chr10	9043369	.	A	ACATG	6006.53	PASS	AB=1.000;AC=31;AF=0.574;AN=54;BaseQRankSum=1.764;DP=564;FS=25.057;HRun=0;HaplotypeScore=192.1468;InbreedingCoeff=-0.0171;MQ=39.81;MQ0=21;MQRankSum=-3.974;QD=13.53;ReadPosRankSum=3.781;VQSLOD=2.7350;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:10,20:31:14.39:377,14,0	0/1:8,0:7:23.79:33,0,24	0/0:28,0:13:17.20:0,17,300	0/0:33,0:10:16.87:0,17,315	0/0:5,7:11:0:0,0,0	1/1:7,16:24:21.53:468,22,0	1/1:10,17:29:15.05:594,15,0	1/1:32,0:31:29.75:1049,30,0	1/1:23,0:23:27.22:356,27,0	1/1:20,0:18:1.68:568,2,0	0/0:16,0:16:0.18:0,0,22	0/1:18,0:17:16.32:66,0,16	0/1:20,0:20:39.42:129,0,39	0/0:14,0:13:5.78:0,6,32	0/1:32,0:30:50.65:51,0,157	1/1:18,1:19:9.09:506,9,0	0/1:24,0:21:33.95:136,0,34	1/1:11,0:12:15.25:336,15,0	0/1:10,0:9:28.31:105,0,28	0/1:21,0:21:26.40:26,0,65	1/1:20,0:19:2.74:38,3,0	0/0:16,0:14:3.75:0,4,29	0/1:13,0:11:19.27:19,0,47	0/1:25,0:21:71.75:89,0,72	1/1:8,16:25:27.08:600,27,0	0/1:23,0:21:99:322,0,110	0/1:14,0:13:11.87:139,0,12	./.
chr10	9043371	.	A	ATG	3688.20	PASS	AB=0.847;AC=25;AF=0.463;AN=54;BaseQRankSum=3.828;DP=548;FS=24.779;HRun=0;HaplotypeScore=185.0136;InbreedingCoeff=-0.2955;MQ=40.22;MQ0=22;MQRankSum=-2.756;QD=8.40;ReadPosRankSum=5.071;VQSLOD=1.5653;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:32,0:32:17.83:105,18,0	0/0:7,0:6:3.01:0,3,34	0/0:27,0:12:23.21:0,23,336	0/0:35,0:11:28.64:0,29,398	0/1:14,1:13:0:0,0,0	1/1:23,1:24:21.67:227,22,0	0/1:27,2:29:12.45:301,0,12	0/1:13,16:28:52.71:747,0,53	0/1:22,1:23:47.35:159,0,47	0/1:16,4:18:61.01:552,0,61	0/0:13,2:15:5.95:0,6,43	0/1:13,5:17:46.76:64,0,47	0/1:15,3:18:65.35:106,0,65	0/0:9,3:11:6:0,6,54	0/1:26,5:29:10.57:11,0,298	0/1:17,1:18:61.95:281,0,62	0/1:17,8:21:93.56:133,0,94	1/1:13,0:13:19.21:201,19,0	0/1:8,1:8:71.43:97,0,71	0/1:11,10:21:22.86:23,0,112	1/1:8,13:20:2.41:38,2,0	0/0:10,3:11:2.60:0,3,38	0/1:10,1:9:5.36:5,0,71	0/1:18,9:23:54.12:54,0,131	0/1:22,1:24:14.37:232,0,14	0/1:17,3:18:99:257,0,208	0/1:9,2:10:57.86:95,0,58	./.
chr10	9044795	.	G	GACCAAAT	57020.75	PASS	AC=50;AF=0.926;AN=54;BaseQRankSum=7.889;DP=687;FS=10.922;HRun=0;HaplotypeScore=245.2217;InbreedingCoeff=0.9442;MQ=74.52;MQ0=0;MQRankSum=-11.184;QD=89.80;ReadPosRankSum=3.842;VQSLOD=4.2709;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,20:33:77.21:2753,77,0	1/1:4,9:13:33.11:1233,33,0	0/0:25,0:25:72.23:0,72,1815	0/0:25,0:25:63.18:0,63,1518	1/1:9,27:36:81.10:2708,81,0	1/1:9,14:23:57.19:1892,57,0	1/1:9,12:21:42.14:1505,42,0	1/1:26,11:37:78.27:2791,78,0	1/1:7,20:27:66.23:2570,66,0	1/1:13,21:35:93.32:3622,93,0	1/1:9,22:32:90.31:3109,90,0	1/1:7,18:25:69.24:2662,69,0	1/1:11,26:37:93.32:3335,93,0	1/1:6,24:31:75.26:2869,75,0	1/1:8,21:30:78.27:2878,78,0	1/1:10,18:30:81.28:2846,81,0	1/1:5,12:19:36.12:1407,36,0	1/1:4,2:6:6.02:153,6,0	1/1:9,7:16:42.14:1293,42,0	1/1:11,25:36:99:3490,99,0	1/1:4,3:9:18.06:513,18,0	1/1:11,17:28:78.26:2484,78,0	1/1:8,17:25:66.18:2355,66,0	1/1:4,10:15:33.02:1100,33,0	1/1:3,21:24:69.24:2748,69,0	1/1:5,24:30:81.23:2980,81,0	1/1:7,10:17:45.15:1726,45,0	./.
chr10	9045031	.	T	TC	20053.54	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=8.315;DP=605;FS=21.909;HRun=1;HaplotypeScore=246.4954;InbreedingCoeff=0.9443;MQ=70.63;MQ0=0;MQRankSum=-9.583;QD=35.43;ReadPosRankSum=2.701;VQSLOD=0.5067;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,23:29:58.91:735,59,0	1/1:1,8:9:24.05:328,24,0	0/0:18,0:18:47.48:0,47,533	0/0:21,0:21:36.55:0,37,525	1/1:2,20:22:56.52:614,57,0	1/1:4,22:26:66.14:923,66,0	1/1:0,21:21:60.04:806,60,0	1/1:3,34:37:96.08:1302,96,0	1/1:0,21:21:57.08:798,57,0	1/1:0,26:26:72.24:1075,72,0	1/1:1,15:16:38.96:510,39,0	1/1:1,27:28:72.20:1048,72,0	1/1:0,23:23:63.21:939,63,0	1/1:1,28:29:72.24:1066,72,0	1/1:0,25:25:75.19:1091,75,0	1/1:6,22:27:66.14:937,66,0	1/1:2,25:27:63.04:867,63,0	1/1:1,8:9:27.09:398,27,0	1/1:4,16:20:51.13:736,51,0	1/1:1,33:34:98.98:1322,99,0	1/1:1,12:13:20.68:173,21,0	1/1:1,9:10:27.02:363,27,0	1/1:0,20:20:56.85:724,57,0	1/1:3,12:15:35.77:476,36,0	1/1:1,22:23:63.14:906,63,0	1/1:2,28:30:72.18:1023,72,0	1/1:1,22:23:54.18:805,54,0	1/1:0,2:2:6.02:90,6,0
chr10	9045245	.	G	GT	30230.61	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=3.166;DP=748;FS=2.726;HRun=0;HaplotypeScore=172.1030;InbreedingCoeff=0.9978;MQ=83.27;MQ0=0;MQRankSum=-11.102;QD=43.31;ReadPosRankSum=7.856;VQSLOD=3.2583;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:2,50:52:99:2157,135,0	1/1:0,16:16:42.14:671,42,0	0/0:27,0:28:71.42:0,71,918	0/0:22,0:22:60.18:0,60,781	1/1:2,24:26:69.24:1103,69,0	1/1:2,38:40:99:1774,111,0	1/1:0,14:14:39.13:623,39,0	1/1:6,29:35:99:1570,102,0	1/1:0,13:13:39.13:623,39,0	1/1:1,31:32:93.32:1486,93,0	1/1:0,27:27:81.28:1293,81,0	1/1:0,25:25:66.23:1054,66,0	1/1:0,22:22:57.19:910,57,0	1/1:2,34:37:93.32:1475,93,0	1/1:1,27:28:78.27:1246,78,0	1/1:3,28:31:72.25:1150,72,0	1/1:0,40:40:99:1726,108,0	1/1:0,13:13:39.13:623,39,0	1/1:2,20:21:66.19:1019,66,0	1/1:0,34:34:99:1582,99,0	1/1:2,28:30:81.28:1295,81,0	1/1:1,26:27:72.25:1151,72,0	1/1:1,23:24:57.19:911,57,0	1/1:0,23:23:60.20:959,60,0	1/1:1,26:27:72.25:1151,72,0	1/1:2,26:28:78.23:1192,78,0	1/1:1,24:25:72.25:1150,72,0	1/1:0,7:7:21.07:336,21,0
chr10	9046566	.	CT	C	4319.11	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=10.867;DP=740;FS=27.162;HRun=3;HaplotypeScore=265.5321;InbreedingCoeff=0.8625;MQ=79.88;MQ0=0;MQRankSum=7.030;QD=6.64;ReadPosRankSum=5.817;VQSLOD=-0.4116;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:61,1:62:79.35:446,79,0	1/1:19,0:19:29.19:132,29,0	0/0:29,0:29:84.01:0,84,1124	0/0:17,0:18:45.10:0,45,586	1/1:20,0:20:26.29:146,26,0	1/1:30,0:30:14.58:133,15,0	1/1:27,0:27:11.46:152,11,0	1/1:24,1:25:3.77:35,4,0	0/0:21,0:21:18.89:0,19,203	1/1:26,1:27:34.02:249,34,0	1/1:22,0:22:28.44:122,28,0	1/1:23,0:23:9.78:123,10,0	1/1:36,0:36:1.23:128,1,0	1/1:30,0:30:47.93:206,48,0	1/1:26,0:26:50.74:229,51,0	1/1:34,0:34:46.52:247,47,0	1/1:22,0:22:35.07:202,35,0	1/1:17,0:17:28.84:116,29,0	1/1:18,1:19:28.22:170,28,0	1/1:34,0:34:29.68:142,30,0	0/0:22,0:22:22.03:0,22,154	1/1:32,0:32:29.14:201,29,0	1/1:28,2:30:40.25:228,40,0	1/1:18,0:18:32.31:172,32,0	1/1:41,0:41:68.40:335,68,0	1/1:25,0:25:43.62:266,44,0	1/1:23,0:23:16.89:95,17,0	1/1:8,0:8:11.43:45,11,0
chr10	9048212	.	C	CTATCTATT	9290.55	PASS	AB=1.000;AC=39;AF=0.696;AN=56;BaseQRankSum=6.046;DP=827;FS=6.751;HRun=0;HaplotypeScore=233.7879;InbreedingCoeff=0.2244;MQ=56.80;MQ0=15;MQRankSum=0.917;QD=12.16;ReadPosRankSum=-2.701;VQSLOD=2.5409;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:35,0:34:59.48:59,0,111	1/1:17,0:17:29.88:266,30,0	0/0:14,0:9:14.10:0,14,154	0/0:10,0:7:11.21:0,11,163	0/1:46,0:44:65.93:66,0,193	0/1:41,0:41:81.32:81,0,313	0/1:19,0:17:71.66:72,0,110	0/1:75,0:69:99:258,0,710	0/0:23,0:23:66.04:0,66,952	1/1:4,28:34:87.01:1389,87,0	1/1:2,31:34:77.27:840,77,0	1/1:22,0:22:21.06:235,21,0	1/1:39,0:38:36.10:426,36,0	1/1:33,0:33:30.08:331,30,0	1/1:1,31:33:18.06:762,18,0	0/1:41,0:39:58.05:58,0,299	1/1:19,0:19:16.35:197,16,0	0/1:13,0:13:7.39:7,0,163	0/1:18,0:17:4.84:347,0,5	1/1:28,0:28:71.71:677,72,0	0/0:15,0:15:36.04:0,36,685	1/1:32,0:31:72.22:656,72,0	1/1:2,33:38:34.34:1074,34,0	1/1:5,16:25:2.97:20,3,0	0/1:44,0:41:95.95:113,0,96	1/1:27,0:27:17.71:690,18,0	1/1:39,0:38:54.15:599,54,0	1/1:11,0:10:6.02:66,6,0
chr10	9048216	.	C	CTATT	11823.36	PASS	AB=0.993;AC=30;AF=0.536;AN=56;BaseQRankSum=-7.170;DP=842;FS=0.321;HRun=0;HaplotypeScore=179.9117;InbreedingCoeff=0.6787;MQ=55.77;MQ0=16;MQRankSum=5.488;QD=21.98;ReadPosRankSum=3.300;VQSLOD=4.7153;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:35:25.12:0,25,264	1/1:1,17:18:29.89:504,30,0	0/0:14,0:8:14.10:0,14,154	0/0:11,0:6:11.21:0,11,163	0/0:44,0:42:77.11:0,77,578	0/0:41,0:41:93.78:0,94,586	0/0:16,0:15:28.78:0,29,211	0/1:57,0:72:90.08:90,0,897	0/0:25,0:25:69.01:0,69,837	0/1:33,1:34:26.82:813,0,27	0/1:33,0:33:86.93:400,0,87	1/1:0,21:22:21.07:566,21,0	1/1:3,37:41:36.12:969,36,0	1/1:3,28:31:33.07:826,33,0	1/1:31,0:31:18.06:346,18,0	0/0:44,0:42:66.55:0,67,496	1/1:3,15:19:7.20:471,7,0	0/0:13,0:14:31.63:0,32,212	1/1:2,21:22:45.80:781,46,0	1/1:0,27:28:80.64:1207,81,0	0/0:14,0:14:34.66:0,35,517	1/1:1,32:32:78.59:1310,79,0	1/1:38,0:38:11.85:490,12,0	0/1:24,0:24:10.97:11,0,40	0/0:44,0:41:43.97:0,44,315	1/1:0,27:29:87.12:1423,87,0	1/1:1,42:43:54.19:1454,54,0	1/1:1,9:9:6.02:161,6,0
chr10	9048218	.	A	ATC	2666.51	PASS	AB=0.861;AC=20;AF=0.357;AN=56;BaseQRankSum=6.391;DP=833;FS=4.349;HRun=0;HaplotypeScore=184.8428;InbreedingCoeff=-0.0806;MQ=56.04;MQ0=17;MQRankSum=-8.633;QD=4.57;ReadPosRankSum=-2.353;VQSLOD=2.4720;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:23,15:39:99:316,0,387	0/1:16,0:16:0.11:0,0,1	0/0:15,0:8:21.07:0,21,288	0/0:12,0:7:17.54:0,18,209	0/1:25,19:42:99:369,0,765	0/1:24,16:40:99:510,0,735	0/1:9,8:15:99:243,0,235	0/1:76,1:71:99:567,0,1636	0/0:25,0:25:72.21:0,72,991	0/0:32,0:32:68.56:0,69,916	0/0:29,0:29:12.44:0,12,231	0/1:21,0:21:0.46:0,0,2	1/1:39,0:38:4.26:15,4,0	0/1:30,0:30:7.18:7,0,13	1/1:30,0:30:4.56:12,5,0	0/1:23,21:43:99:318,0,765	0/0:17,0:17:5.40:0,5,36	0/1:12,2:14:19.95:20,0,358	0/0:23,0:22:46.59:0,47,774	0/0:29,0:29:3.83:0,4,99	0/0:14,0:14:36.09:0,36,515	0/1:32,0:31:5.82:6,0,37	0/1:37,0:37:8.73:9,0,35	0/0:24,0:24:6.02:0,6,85	0/1:29,17:44:99:410,0,850	0/0:30,0:30:39.77:0,40,747	0/1:45,0:44:5.60:6,0,17	1/1:8,0:7:4.04:12,4,0
chr10	9048864	.	C	CT	17679.26	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-7.198;DP=608;FS=13.972;HRun=7;HaplotypeScore=55.0602;InbreedingCoeff=0.9691;MQ=75.95;MQ0=0;MQRankSum=-7.527;QD=30.75;ReadPosRankSum=4.088;VQSLOD=3.7958;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,24:28:71.95:825,72,0	1/1:1,11:12:30.09:362,30,0	0/0:18,0:18:16.40:0,16,360	0/0:15,0:15:12.28:0,12,146	1/1:5,22:27:66.16:781,66,0	1/1:2,23:25:54.17:652,54,0	1/1:2,8:10:15.05:181,15,0	1/1:4,31:35:90.23:1048,90,0	1/1:0,22:22:60.18:725,60,0	1/1:4,25:29:75.21:894,75,0	1/1:2,15:17:45.10:527,45,0	1/1:3,19:22:57.17:684,57,0	1/1:2,25:27:69.21:834,69,0	1/1:3,21:24:60.17:708,60,0	1/1:2,24:26:66.20:797,66,0	1/1:2,16:18:42.13:507,42,0	1/1:1,25:26:63.19:761,63,0	1/1:1,13:14:39.12:471,39,0	1/1:3,14:17:45.07:525,45,0	1/1:1,25:26:75.19:889,75,0	1/1:2,20:22:57.17:689,57,0	1/1:0,17:17:51.16:616,51,0	1/1:1,24:25:66.20:798,66,0	1/1:0,17:17:48.15:580,48,0	1/1:1,23:24:60.18:725,60,0	1/1:5,23:28:69.21:834,69,0	1/1:2,26:28:81.25:977,81,0	1/1:0,9:9:24.07:290,24,0
chr10	9050117	.	A	AC	16271.91	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-16.270;DP=639;FS=6.400;HRun=1;HaplotypeScore=68.8050;InbreedingCoeff=0.9947;MQ=87.61;MQ0=0;MQRankSum=-4.369;QD=39.98;ReadPosRankSum=4.410;VQSLOD=5.4399;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:96.31:0,96,1244	1/1:0,7:7:21.07:314,21,0	0/0:24,0:24:63.20:0,63,818	0/0:21,0:21:54.15:0,54,664	0/0:18,0:18:54.18:0,54,700	0/0:17,0:17:51.17:0,51,662	0/0:20,0:20:60.20:0,60,778	0/0:43,0:43:99:0,117,1456	1/1:1,21:22:63.20:926,63,0	1/1:1,30:31:84.28:1257,84,0	1/1:0,28:28:72.24:1077,72,0	1/1:0,25:25:66.22:989,66,0	1/1:0,17:17:48.05:718,48,0	1/1:0,30:30:87.29:1303,87,0	1/1:0,33:33:93.32:1394,93,0	0/0:25,0:25:75.24:0,75,974	1/1:0,28:28:78.26:1168,78,0	0/0:10,0:10:30.10:0,30,389	1/1:1,20:21:60.19:878,60,0	1/1:0,24:24:63.21:943,63,0	1/1:0,17:16:51.17:764,51,0	1/1:0,20:20:45.15:674,45,0	1/1:1,19:20:51.17:763,51,0	1/1:0,17:17:45.15:674,45,0	0/0:21,0:21:63.20:0,63,817	1/1:1,22:23:63.18:901,63,0	1/1:0,36:35:90.30:1348,90,0	1/1:2,6:8:12.04:179,12,0
chr10	9050387	.	C	CTGTGTGTGTGTG	27544.78	PASS	AB=1.000;AC=51;AF=0.911;AN=56;BaseQRankSum=-0.272;DP=613;FS=4.631;HRun=0;HaplotypeScore=228.7759;InbreedingCoeff=0.6926;MQ=56.85;MQ0=1;MQRankSum=-6.976;QD=48.93;ReadPosRankSum=3.241;VQSLOD=4.2761;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:23:3:25,3,0	1/1:5,3:10:15.05:828,15,0	0/0:23,0:20:30.09:0,30,929	0/0:26,0:21:22.06:0,22,852	1/1:17,0:17:3.01:91,3,0	1/1:28,0:28:23.63:884,24,0	1/1:25,0:24:12.04:443,12,0	1/1:27,0:24:21.06:757,21,0	1/1:6,0:17:20.91:1101,21,0	1/1:23,0:35:60.21:2135,60,0	1/1:12,0:27:33.11:1248,33,0	1/1:15,6:22:24.08:1418,24,0	1/1:22,5:27:33.11:1871,33,0	1/1:17,7:25:24.08:1359,24,0	1/1:16,0:32:51.18:1828,51,0	1/1:12,0:16:15.05:787,15,0	1/1:19,4:23:18.06:920,18,0	1/1:10,0:10:4.01:692,4,0	1/1:21,5:26:51.04:2265,51,0	1/1:24,5:29:21.07:1243,21,0	0/1:11,0:11:0:0,0,0	1/1:5,10:14:21.07:1242,21,0	1/1:15,0:21:27.09:998,27,0	1/1:13,0:25:20.68:819,21,0	1/1:19,0:19:6.02:232,6,0	1/1:20,7:27:45.15:2337,45,0	1/1:10,6:18:30.10:1711,30,0	1/1:4,0:4:11.99:312,12,0
chr10	9050638	.	G	GT	9180.14	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-5.940;DP=531;FS=4.124;HRun=6;HaplotypeScore=112.1382;InbreedingCoeff=0.9771;MQ=64.53;MQ0=1;MQRankSum=-1.675;QD=28.25;ReadPosRankSum=2.461;VQSLOD=4.5575;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:6:15.02:0,15,141	1/1:3,9:12:36.03:417,36,0	0/0:21,0:17:37.67:0,38,332	0/0:28,0:21:13.42:0,13,337	0/0:25,0:25:47.98:0,48,447	0/0:23,0:23:44.10:0,44,451	0/0:23,0:23:57.03:0,57,523	0/0:29,0:29:60.09:0,60,585	1/1:1,14:15:27.09:340,27,0	1/1:6,12:18:42.09:510,42,0	1/1:4,24:28:69.22:863,69,0	1/1:8,12:20:45.07:530,45,0	1/1:5,21:26:54.60:662,55,0	1/1:3,13:16:33.08:391,33,0	1/1:6,10:16:30.05:359,30,0	0/0:28,0:28:62.28:0,62,560	1/1:3,5:8:12.04:151,12,0	0/0:6,0:6:18.02:0,18,170	1/1:3,22:25:63.17:774,63,0	1/1:2,19:21:57.15:691,57,0	1/1:4,17:21:33.11:415,33,0	1/1:4,17:21:54.17:668,54,0	1/1:4,15:19:45.14:564,45,0	1/1:3,4:7:15.05:184,15,0	0/0:15,0:15:32.86:0,33,294	1/1:6,12:18:42.09:510,42,0	1/1:3,28:31:84.24:1038,84,0	1/1:0,3:3:9.03:113,9,0
chr10	9050645	.	GC	G	4305.10	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-6.045;DP=525;FS=12.650;HRun=6;HaplotypeScore=135.4529;InbreedingCoeff=0.9814;MQ=60.23;MQ0=5;MQRankSum=-0.942;QD=27.60;ReadPosRankSum=-2.673;VQSLOD=2.5849;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,5:9:24.03:244,24,0	0/0:11,0:11:33.09:0,33,386	0/0:27,0:16:26.40:0,26,396	0/0:31,2:20:35.77:0,36,514	1/1:0,25:25:64.71:677,65,0	1/1:3,22:25:69.14:717,69,0	1/1:1,22:23:66.16:706,66,0	1/1:4,23:27:60.11:631,60,0	0/0:14,0:14:27.06:0,27,312	0/0:16,0:16:45.05:0,45,526	0/0:24,0:24:72.19:0,72,836	0/0:18,0:18:49.54:0,50,528	0/0:26,0:26:60.18:0,60,719	0/0:18,0:18:30.04:0,30,337	0/0:16,0:16:36.04:0,36,414	1/1:3,25:28:69.12:720,69,0	0/0:6,0:6:11.85:0,12,117	1/1:0,6:6:18.05:193,18,0	0/0:22,0:22:56.94:0,57,651	0/0:21,0:21:55.98:0,56,659	0/0:19,0:19:39.10:0,39,482	0/0:20,0:20:49.96:0,50,585	0/0:19,0:19:52.96:0,53,618	0/0:8,0:8:17.97:0,18,187	1/1:0,13:13:39.10:416,39,0	0/0:14,0:14:36.11:0,36,448	0/0:31,0:31:85.55:0,86,975	0/0:3,0:3:9.03:0,9,111
chr10	9050675	.	C	CCTCTCT	10615.10	PASS	AB=0.763;AC=40;AF=0.714;AN=56;BaseQRankSum=-6.485;DP=703;FS=7.068;HRun=0;HaplotypeScore=204.7681;InbreedingCoeff=0.3876;MQ=59.00;MQ0=16;MQRankSum=-3.782;QD=19.44;ReadPosRankSum=-2.864;VQSLOD=3.3702;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,0:21:3.87:36,4,0	1/1:10,2:11:12:185,12,0	0/0:59,0:23:20.74:0,21,345	0/1:85,0:31:42.59:43,0,66	0/1:10,0:23:29.74:33,0,30	0/0:11,0:25:13.70:0,14,83	0/1:17,0:29:28.69:66,0,29	0/1:29,0:34:78.50:83,0,79	0/0:19,0:19:27.07:0,27,497	1/1:12,13:28:54.58:1200,55,0	1/1:20,3:23:24.05:408,24,0	1/1:6,8:18:24.07:564,24,0	1/1:6,14:20:39.07:1130,39,0	0/1:11,10:21:25.72:466,0,26	1/1:3,16:22:26.88:668,27,0	0/0:19,0:31:20.66:0,21,185	1/1:9,1:11:11.71:136,12,0	1/1:6,0:7:1.01:37,1,0	1/1:22,4:26:38.58:698,39,0	1/1:27,6:32:45.03:928,45,0	0/0:19,0:19:39.11:0,39,711	1/1:6,12:20:21.06:533,21,0	1/1:15,5:20:33.10:836,33,0	1/1:15,0:14:15.05:241,15,0	0/1:14,0:22:39.16:39,0,47	1/1:5,11:16:39.08:811,39,0	1/1:23,7:33:69.14:1376,69,0	1/1:1,1:2:3.01:100,3,0
chr10	9050763	.	G	GTC	8145.07	PASS	AB=0.811;AC=33;AF=0.611;AN=54;BaseQRankSum=-0.952;DP=622;FS=2.154;HRun=0;HaplotypeScore=169.0334;InbreedingCoeff=-0.1677;MQ=47.73;MQ0=13;MQRankSum=4.901;QD=14.84;ReadPosRankSum=6.695;VQSLOD=4.5472;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,8:21:17.73:272,18,0	1/1:6,1:7:4.94:104,5,0	0/0:12,0:5:9.03:0,9,119	0/1:19,0:10:22.70:23,0,178	1/1:10,11:19:15.03:245,15,0	0/1:16,14:27:12.01:388,0,12	1/1:15,11:25:10.96:165,11,0	0/1:25,12:36:99:343,0,463	0/1:10,11:21:64.86:391,0,65	0/0:21,0:19:40.98:0,41,467	0/1:18,0:18:57.16:57,0,215	1/1:16,4:19:21.94:375,22,0	0/1:18,10:27:66.06:687,0,66	1/1:21,6:26:24.74:723,25,0	0/0:31,1:32:9.05:0,9,571	1/1:16,17:33:16.81:463,17,0	0/1:21,6:27:26.32:464,0,26	0/1:1,3:4:25.11:147,0,25	0/1:22,3:24:99:512,0,152	1/1:14,11:25:33.10:556,33,0	./.	1/1:19,4:23:44.93:730,45,0	0/1:21,0:20:2.53:20,0,3	0/1:29,1:29:2.50:44,0,3	0/1:15,5:19:29.86:139,0,30	0/1:17,6:22:99:475,0,225	0/1:28,5:32:99:725,0,107	0/1:3,4:6:26.54:98,0,27
chr10	9050775	.	GTC	G	216.14	PASS	AB=0.981;AC=15;AF=0.300;AN=50;BaseQRankSum=0.378;DP=656;FS=1.029;HRun=0;HaplotypeScore=194.8946;InbreedingCoeff=-0.0896;MQ=43.28;MQ0=17;MQRankSum=2.088;QD=0.65;ReadPosRankSum=0.280;VQSLOD=2.7934;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:22,1:21:2.92:32,3,0	0/0:9,0:8:9.47:0,9,87	./.	./.	0/1:21,0:19:0:0,0,0	0/1:36,0:33:2.23:2,0,134	1/1:27,0:26:2.50:11,2,0	0/0:37,0:35:1.25:0,1,3	0/0:18,1:19:15.02:0,15,170	0/0:26,0:25:7.95:0,8,49	0/1:18,0:18:15.81:20,0,16	0/1:21,0:20:10.60:11,0,39	0/0:35,0:34:12.92:0,13,160	0/1:28,2:29:6.31:6,0,138	0/0:32,0:32:6.01:0,6,65	0/0:31,0:31:6:0,6,52	0/1:29,0:28:17.98:18,0,43	0/0:8,0:8:6.45:0,6,52	0/1:22,0:22:8:8,0,39	0/0:28,0:28:8.98:0,9,72	./.	0/1:25,0:26:12.43:12,0,46	0/0:29,0:28:3.19:0,3,9	0/0:32,0:31:1.83:0,2,20	0/1:21,1:19:27.61:58,0,28	0/1:27,1:27:5.06:68,0,5	0/1:29,1:30:45.06:99,0,45	0/0:13,0:11:11.41:0,11,92
chr10	9050779	.	C	CTG	2914.06	PASS	AB=0.982;AC=25;AF=0.463;AN=54;BaseQRankSum=10.723;DP=674;FS=27.007;HRun=0;HaplotypeScore=190.3393;InbreedingCoeff=-0.2087;MQ=41.99;MQ0=17;MQRankSum=3.503;QD=5.69;ReadPosRankSum=5.945;VQSLOD=0.9475;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:23:14.25:93,14,0	0/1:9,0:8:35.06:35,0,53	0/0:5,0:2:5.85:0,6,45	0/0:7,0:2:6.01:0,6,63	1/1:21,1:20:8.95:72,9,0	0/1:36,1:34:99:199,0,108	1/1:28,0:26:8.70:78,9,0	0/1:35,0:33:38.39:239,0,38	0/1:18,1:19:54.44:155,0,54	0/0:25,0:24:65.15:0,65,495	0/0:22,0:22:13.01:0,13,183	0/1:20,0:19:43.12:115,0,43	0/1:37,0:36:99:265,0,178	0/1:30,0:29:99:271,0,106	0/0:32,0:32:29.73:0,30,353	1/1:33,0:33:1.59:145,2,0	0/1:31,0:30:33.45:192,0,33	0/1:7,1:8:43.16:95,0,43	0/1:25,0:25:81.67:82,0,210	0/1:31,0:31:58.51:172,0,59	./.	1/1:26,1:27:11.28:319,11,0	0/0:29,0:28:23.98:0,24,206	0/0:33,0:32:30.59:0,31,296	0/1:20,1:18:26.58:64,0,27	0/1:27,1:27:99:150,0,164	0/1:32,0:30:88.44:319,0,88	0/1:14,0:11:24.80:25,0,101
chr10	9051480	.	T	TA	1030.18	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=-0.468;DP=565;FS=5.658;HRun=7;HaplotypeScore=64.3472;InbreedingCoeff=0.5419;MQ=47.44;MQ0=20;MQRankSum=-1.395;QD=25.13;ReadPosRankSum=-1.785;VQSLOD=3.5420;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:30.05:0,30,290	0/0:5,0:5:15.02:0,15,145	0/0:8,0:1:2.97:0,3,20	0/1:7,0:2:8.68:9,0,23	0/0:29,0:29:51.07:0,51,492	0/0:25,0:25:45.07:0,45,434	0/0:13,0:13:36.06:0,36,347	0/0:25,0:24:63.09:0,63,608	0/0:2,0:16:14.26:0,14,42	0/0:28,0:27:69.10:0,69,663	0/0:25,0:25:36.05:0,36,347	0/0:20,0:20:38.91:0,39,376	0/0:18,0:18:27.01:0,27,261	0/0:16,0:16:17.76:0,18,174	0/0:27,0:27:48.07:0,48,463	0/0:24,0:24:51.07:0,51,492	0/0:24,0:23:30.05:0,30,290	0/0:8,0:8:18.03:0,18,174	0/0:20,0:17:48.08:0,48,463	1/1:3,31:34:93.29:1123,93,0	0/0:2,0:13:14.26:0,14,42	0/0:32,0:32:54.08:0,54,521	0/0:23,0:23:45.07:0,45,435	0/0:14,0:14:12.02:0,12,116	0/0:27,0:27:68.75:0,69,666	0/0:35,0:35:93.11:0,93,889	0/0:27,0:26:48.08:0,48,464	0/0:6,0:5:8.97:0,9,78
chr10	9054198	.	G	GGTGT	3182.91	PASS	AB=0.849;AC=44;AF=0.846;AN=52;BaseQRankSum=0.590;DP=550;FS=7.975;HRun=0;HaplotypeScore=152.4581;InbreedingCoeff=-0.1282;MQ=65.23;MQ0=15;MQRankSum=-0.209;QD=6.86;ReadPosRankSum=0.480;VQSLOD=2.2476;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:20:2.74:12,3,0	0/1:6,0:6:34.45:115,0,34	./.	./.	1/1:13,0:21:8.23:37,8,0	1/1:20,0:25:9.02:50,9,0	0/1:16,0:22:21.88:54,0,22	0/1:22,0:20:3.43:42,0,3	1/1:11,0:11:3.01:50,3,0	1/1:22,0:22:15.01:243,15,0	0/0:18,0:18:1.73:0,2,6	1/1:10,0:10:3.47:26,3,0	1/1:8,3:14:12.25:224,12,0	1/1:23,3:26:5.21:140,5,0	1/1:11,0:13:3.01:52,3,0	0/1:14,0:19:65.83:88,0,66	0/1:11,6:19:25.68:334,0,26	1/1:10,0:12:8.33:38,8,0	1/1:15,0:13:6.02:98,6,0	1/1:18,9:30:12.51:247,13,0	1/1:23,0:20:3.01:34,3,0	1/1:13,3:19:8.97:91,9,0	1/1:21,0:22:2.61:69,3,0	1/1:10,1:11:3.01:70,3,0	0/1:17,0:22:22.37:22,0,79	1/1:29,0:29:38.98:560,39,0	1/1:12,6:21:33.52:502,34,0	1/1:5,1:6:6.02:109,6,0
chr10	9054225	.	G	GTGTGTGTGTGTGTA	548.29	PASS	AB=0.994;AC=18;AF=0.321;AN=56;BaseQRankSum=2.713;DP=524;FS=9.653;HRun=0;HaplotypeScore=236.1254;InbreedingCoeff=-0.0287;MQ=45.31;MQ0=28;MQRankSum=-1.885;QD=2.69;ReadPosRankSum=0.597;VQSLOD=1.4689;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:18:11.72:0,12,120	0/1:8,0:8:38.20:38,0,122	0/0:48,0:16:28.69:0,29,236	0/0:47,0:17:4.47:0,4,139	0/0:20,0:20:11.96:0,12,259	0/0:18,0:18:10.25:0,10,138	0/0:21,0:21:32.02:0,32,425	0/0:28,0:25:49.28:0,49,384	1/1:2,6:13:3.01:204,3,0	0/1:17,0:17:14.52:15,0,86	0/0:16,0:16:5.99:0,6,49	1/1:11,0:11:3.45:22,3,0	0/0:12,0:11:14.45:0,14,146	0/0:20,0:19:19.64:0,20,145	0/1:13,0:13:16.42:47,0,16	0/1:15,0:16:99:148,0,513	0/1:14,0:14:36.43:36,0,232	0/0:8,0:7:6.22:0,6,140	0/1:9,0:6:33.05:41,0,33	0/1:21,0:21:21.66:22,0,52	1/1:16,0:15:2.59:23,3,0	0/0:18,0:18:12:0,12,171	0/0:20,0:20:10.46:0,10,66	0/1:9,0:9:12.63:32,0,13	0/0:24,0:24:22.74:0,23,465	0/1:26,0:25:39.83:40,0,228	0/1:24,0:23:16.64:17,0,195	1/1:4,0:4:0.27:20,0,0
chr10	9054663	.	TACACACACACAC	T	5691.26	PASS	AB=0.679;AC=27;AF=0.500;AN=54;BaseQRankSum=8.442;DP=649;FS=18.800;HRun=0;HaplotypeScore=216.6439;InbreedingCoeff=0.6191;MQ=61.59;MQ0=12;MQRankSum=-7.896;QD=15.51;ReadPosRankSum=-0.249;VQSLOD=2.5199;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:31:29.28:0,29,1027	1/1:4,5:10:6.02:207,6,0	0/0:31,0:16:6.47:0,6,61	0/0:27,0:14:4.06:0,4,29	0/0:15,0:17:21.04:0,21,584	0/0:26,0:29:40.81:0,41,1449	0/0:9,0:15:18.06:0,18,597	0/0:26,0:24:21.04:0,21,416	0/1:13,0:31:24.17:32,0,24	0/1:18,1:28:99:223,0,109	1/1:8,0:12:0.76:2,1,0	1/1:11,18:29:26.22:1014,26,0	1/1:13,13:27:26.92:907,27,0	1/1:17,19:37:8.09:595,8,0	1/1:7,0:22:12.03:158,12,0	0/0:20,0:26:16.56:0,17,560	1/1:10,14:24:8.86:286,9,0	0/0:6,0:12:24.08:0,24,866	1/1:14,5:19:12.07:377,12,0	1/1:16,9:25:14.25:365,14,0	0/0:23,0:31:17.06:0,17,359	1/1:15,10:25:3.71:121,4,0	0/0:9,0:9:3.43:0,3,20	0/1:11,0:22:16.09:19,0,16	0/0:17,0:25:23.78:0,24,799	1/1:19,12:30:10.54:503,11,0	1/1:7,16:23:30.53:884,31,0	./.
chr10	9057352	.	TTTGTTGTTGTTGTTG	T	19510.30	PASS	AB=0.767;AC=44;AF=0.786;AN=56;BaseQRankSum=-0.350;DP=717;FS=4.969;HRun=0;HaplotypeScore=277.5920;InbreedingCoeff=0.7089;MQ=64.20;MQ0=2;MQRankSum=-1.402;QD=31.62;ReadPosRankSum=2.111;VQSLOD=3.4767;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:7,0:38:23.87:746,24,0	1/1:1,7:8:9.73:587,10,0	0/1:40,0:31:3.54:4,0,161	0/0:18,0:10:11.66:0,12,253	1/1:11,0:39:29.38:1417,29,0	1/1:8,0:31:15.05:516,15,0	1/1:1,0:19:6.02:139,6,0	0/0:18,0:42:20.05:0,20,180	0/0:9,0:22:48.06:0,48,1093	1/1:12,32:44:86.74:2134,87,0	1/1:7,13:20:24:690,24,0	1/1:5,16:21:21.07:876,21,0	1/1:7,21:29:29.91:1231,30,0	1/1:4,17:21:21.07:876,21,0	1/1:4,24:28:33.11:1373,33,0	0/1:4,0:31:51.66:704,0,52	1/1:11,22:33:12.07:1004,12,0	0/0:4,0:4:8.91:0,9,61	1/1:10,5:15:14.99:452,15,0	1/1:10,23:33:39.10:1207,39,0	0/0:11,0:12:17.95:0,18,309	1/1:9,25:34:54.05:1757,54,0	1/1:14,17:31:11.40:498,11,0	1/1:5,16:21:6.02:250,6,0	1/1:3,0:19:24.08:832,24,0	1/1:7,22:30:62.72:1592,63,0	1/1:10,12:22:8.83:375,9,0	1/1:3,7:10:6.02:250,6,0
chr10	9058714	.	T	TC	820.24	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=17.658;DP=750;FS=0.000;HRun=2;HaplotypeScore=112.8625;InbreedingCoeff=0.2953;MQ=54.79;MQ0=1;MQRankSum=-16.607;QD=3.45;ReadPosRankSum=-1.472;VQSLOD=-0.2968;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:24:10.98:45,0,11	0/0:13,0:13:39.12:0,39,528	0/0:28,0:20:54.16:0,54,726	0/0:24,0:19:57.19:0,57,795	0/1:23,0:23:5.66:64,0,6	0/1:22,0:22:17.80:29,0,18	0/1:25,0:23:12.82:75,0,13	0/1:36,0:32:42.96:43,0,89	1/1:0,24:23:33.11:466,33,0	0/0:30,0:30:87.29:0,87,1203	0/0:24,0:24:72.23:0,72,992	0/0:24,0:24:72.23:0,72,988	0/0:35,0:35:99:0,102,1423	0/0:32,0:32:96.30:0,96,1291	0/0:42,0:42:99:0,120,1698	0/1:35,0:35:33.92:46,0,34	0/0:46,0:46:99:0,132,1813	1/1:7,0:7:4.93:11,5,0	0/0:13,0:13:39.11:0,39,502	0/0:32,0:32:93.31:0,93,1300	1/1:0,6:5:9.03:128,9,0	0/0:30,0:30:90.27:0,90,1207	0/0:20,0:20:60.19:0,60,823	0/0:34,0:34:99:0,102,1426	0/1:34,0:33:23.33:76,0,23	0/0:42,0:42:99:0,126,1742	0/0:38,0:38:99:0,111,1552	0/0:5,0:5:15.02:0,15,189
chr10	9058716	.	T	TG	6757.91	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=17.739;DP=758;FS=3.901;HRun=1;HaplotypeScore=95.6051;InbreedingCoeff=0.9843;MQ=54.88;MQ0=1;MQRankSum=-16.871;QD=27.25;ReadPosRankSum=-3.423;VQSLOD=3.7585;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,26:24:45.07:643,45,0	0/0:13,0:13:36.12:0,36,466	0/0:26,0:19:54.17:0,54,692	0/0:24,0:19:57.18:0,57,722	1/1:3,24:27:54.10:760,54,0	1/1:2,21:23:36.12:537,36,0	1/1:4,24:26:60.16:869,60,0	1/1:4,31:32:93.31:1370,93,0	1/1:25,0:24:36.12:510,36,0	0/0:34,0:33:90.27:0,90,1134	0/0:23,0:23:66.21:0,66,856	0/0:24,0:24:69.21:0,69,879	0/0:36,0:36:99:0,108,1374	0/0:30,0:30:87.27:0,87,1114	0/0:42,1:43:85.37:0,85,1560	1/1:4,34:38:51.17:755,51,0	0/0:45,0:45:99:0,132,1652	1/1:0,7:7:12.04:179,12,0	0/0:11,0:11:33.10:0,33,415	0/0:33,0:33:96.28:0,96,1216	1/1:6,0:5:9.03:130,9,0	0/0:27,0:27:75.23:0,75,959	0/0:21,0:21:54.16:0,54,685	0/0:35,0:35:99:0,102,1323	1/1:0,32:31:69.19:1004,69,0	0/0:42,0:42:99:0,123,1572	0/0:38,0:38:99:0,114,1464	0/0:5,0:5:15.01:0,15,176
chr10	9059967	.	CAG	C	3129.30	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=7.925;DP=670;FS=11.040;HRun=0;HaplotypeScore=101.4362;InbreedingCoeff=0.9584;MQ=83.98;MQ0=0;MQRankSum=-1.542;QD=29.80;ReadPosRankSum=2.153;VQSLOD=5.4275;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,123,2214	0/0:9,0:9:27.08:0,27,458	0/0:23,0:23:60.20:0,60,1043	0/0:27,0:27:66.12:0,66,1111	0/0:27,0:27:54.19:0,54,971	0/0:24,0:24:63.22:0,63,1128	0/0:28,0:28:69.24:0,69,1241	0/0:27,0:27:81.28:0,81,1458	0/0:24,0:24:66.23:0,66,1188	1/1:2,15:17:45.15:630,45,0	1/1:4,19:23:54.18:754,54,0	0/0:22,0:22:63.22:0,63,1133	0/0:40,0:40:99:0,105,1835	0/0:32,0:32:87.30:0,87,1565	1/1:3,27:30:24.42:996,24,0	0/0:30,0:30:69.24:0,69,1225	0/0:11,0:11:27.07:0,27,455	0/0:7,0:7:21.07:0,21,365	0/0:18,0:18:48.13:0,48,758	0/0:30,0:30:72.25:0,72,1258	0/0:29,0:29:75.23:0,75,1318	0/0:24,0:24:51.17:0,51,918	1/1:1,21:22:39.13:546,39,0	1/1:1,12:13:27.09:378,27,0	0/0:20,0:20:48.15:0,48,835	0/0:32,1:33:57.31:0,57,1660	0/0:34,0:34:93.31:0,93,1643	0/0:1,0:1:3.01:0,3,54
chr10	9060033	.	T	TTCAGTTCCCTGAAAGCATGAGAAGG	2335.71	PASS	AB=0.800;AC=33;AF=0.971;AN=34;BaseQRankSum=-2.592;DP=38;FS=19.717;HRun=0;HaplotypeScore=39.4276;InbreedingCoeff=-0.1859;MQ=160.74;MQ0=0;MQRankSum=-1.363;QD=63.13;ReadPosRankSum=-1.737;VQSLOD=0.3195;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,0:2:6.02:168,6,0	./.	1/1:3,1:6:6.34:789,6,0	0/1:6,0:8:26.63:339,0,27	1/1:1,0:1:3.01:51,3,0	./.	1/1:1,0:1:3.01:50,3,0	./.	1/1:2,0:2:6.02:100,6,0	1/1:2,0:2:6.02:128,6,0	./.	./.	1/1:3,0:3:6.02:147,6,0	1/1:1,0:1:3.01:50,3,0	1/1:1,0:1:3:25,3,0	./.	1/1:2,0:2:2.98:22,3,0	./.	1/1:1,0:1:3.01:55,3,0	1/1:2,0:2:6.02:145,6,0	1/1:1,0:1:3.01:42,3,0	1/1:2,0:2:6.02:205,6,0	./.	./.	1/1:1,0:1:3.01:49,3,0	1/1:1,0:1:3.01:54,3,0	./.	./.
chr10	9060301	.	ATC	A	48.14	PASS	AB=0.755;AC=16;AF=0.533;AN=30;BaseQRankSum=-1.333;DP=98;FS=12.420;HRun=0;HaplotypeScore=31.4730;InbreedingCoeff=0.2463;MQ=62.69;MQ0=2;MQRankSum=-2.016;QD=0.82;ReadPosRankSum=1.830;VQSLOD=-0.2190;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	1/1:2,0:2:0.89:2,1,0	0/0:11,1:5:2.26:0,2,75	0/1:19,1:8:2.26:2,0,14	0/1:3,0:4:0:0,0,0	0/1:4,0:4:0:0,0,0	./.	./.	./.	0/1:2,1:6:5.89:71,0,6	0/0:1,0:3:0:0,0,0	./.	1/1:3,0:3:2.88:15,3,0	./.	0/1:1,0:4:0:0,0,0	0/0:3,0:3:5.21:0,5,30	1/1:0,2:3:1.36:3,1,0	./.	./.	1/1:0,3:3:2.22:7,2,0	./.	0/1:2,1:3:0:0,0,0	./.	./.	0/0:1,1:3:2.63:0,3,18	./.	./.	1/1:2,0:2:4.25:31,4,0
chr10	9060303	.	CGGGTG	C	96.76	PASS	AB=0.846;AC=17;AF=0.531;AN=32;BaseQRankSum=-0.449;DP=104;FS=0.000;HRun=0;HaplotypeScore=32.9096;InbreedingCoeff=0.2242;MQ=60.94;MQ0=2;MQRankSum=-2.245;QD=1.47;ReadPosRankSum=0.612;VQSLOD=0.9955;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	0/0:2,0:2:1.25:0,1,3	0/0:13,0:5:11.92:0,12,120	0/1:27,1:9:8.03:8,0,31	0/1:4,0:4:0:0,0,0	0/1:4,0:4:0.19:0,0,0	./.	./.	0/0:3,0:3:0:0,0,0	0/1:4,2:6:18.95:119,0,19	0/0:2,1:3:0:0,0,0	./.	1/1:3,0:3:2.50:9,2,0	./.	0/1:1,3:4:0:0,0,0	1/1:3,0:3:0.46:1,0,0	1/1:3,0:3:5.03:30,5,0	./.	./.	1/1:3,0:3:2.74:13,3,0	./.	1/1:3,0:3:0.47:1,0,0	./.	./.	1/1:3,0:3:0.46:1,0,0	./.	./.	0/0:2,0:2:1.68:0,2,6
chr10	9060315	.	AGCCAGC	A	1127	PASS	AB=0.936;AC=31;AF=0.620;AN=50;BaseQRankSum=-3.032;DP=359;FS=2.151;HRun=0;HaplotypeScore=118.5637;InbreedingCoeff=0.1082;MQ=44.34;MQ0=9;MQRankSum=-1.804;QD=4.99;ReadPosRankSum=-0.458;VQSLOD=2.3000;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	1/1:8,0:8:1.54:14,2,0	0/0:21,0:7:11.23:0,11,134	0/0:54,0:13:6.48:0,6,144	1/1:15,0:13:3.01:47,3,0	1/1:10,0:10:1.25:3,1,0	./.	1/1:6,0:1:3:25,3,0	0/0:18,0:18:1.36:0,1,3	0/1:16,0:15:29.98:401,0,30	0/1:11,0:11:0.19:0,0,0	0/0:15,0:15:7.21:0,7,62	0/1:16,0:16:19.34:19,0,46	1/1:14,0:14:3.01:48,3,0	0/1:16,0:15:0:0,0,0	1/1:8,0:7:0.08:1,0,0	1/1:5,0:5:6.90:104,7,0	1/1:1,0:1:1.82:5,2,0	0/1:5,0:5:26.87:27,0,130	1/1:26,0:26:1.76:8,2,0	./.	1/1:12,0:12:0.28:0,0,0	1/1:18,0:18:0.81:2,1,0	0/0:10,0:10:0:0,0,0	0/0:4,0:4:0:0,0,0	0/1:4,17:21:73.83:284,0,74	0/1:10,0:9:39.30:100,0,39	1/1:7,0:8:3.04:156,3,0
chr10	9060332	.	G	GAC	107.95	PASS	AB=0.992;AC=15;AF=0.268;AN=56;BaseQRankSum=1.156;DP=577;FS=7.809;HRun=0;HaplotypeScore=172.9886;InbreedingCoeff=0.2338;MQ=38.49;MQ0=13;MQRankSum=0.121;QD=0.45;ReadPosRankSum=-1.106;VQSLOD=2.0798;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:15,0:14:2.81:20,0,3	0/0:13,0:13:6.43:0,6,61	0/0:24,0:6:1.99:0,2,28	0/1:60,0:14:5.14:5,0,48	0/0:31,0:29:2.96:0,3,20	0/0:13,0:13:2.81:0,3,18	1/1:9,1:10:5.75:38,6,0	0/1:34,0:27:42.84:43,0,146	0/0:20,0:20:2.42:0,2,44	0/0:28,0:27:33.51:0,34,420	0/0:25,0:25:6.29:0,6,70	0/0:17,0:17:8.42:0,8,125	0/0:19,0:19:4.09:0,4,48	1/1:16,1:17:3.01:44,3,0	0/1:22,0:21:0:0,0,0	0/0:13,3:15:2.68:0,3,20	0/0:8,0:8:5.30:0,5,48	0/0:3,0:3:6.13:0,6,25	0/0:22,0:21:46.95:0,47,351	0/0:35,0:35:2.32:0,2,44	1/1:11,0:11:3.01:40,3,0	0/0:14,0:14:0:0,0,0	0/1:29,0:29:0.04:0,0,0	1/1:13,0:13:1.80:5,2,0	0/1:16,1:16:0:0,0,0	0/0:33,0:32:44.13:0,44,450	0/0:18,0:17:17.10:0,17,131	0/1:10,0:10:37.27:37,0,171
chr10	9061335	.	T	TG	653.66	PASS	AC=22;AF=0.500;AN=44;BaseQRankSum=1.829;DP=151;FS=6.073;HRun=7;HaplotypeScore=24.5920;InbreedingCoeff=0.6343;MQ=43.62;MQ0=8;MQRankSum=-3.831;QD=11.27;ReadPosRankSum=-2.637;VQSLOD=0.0476;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:8:15.02:0,15,145	1/1:1,2:3:3.01:36,3,0	./.	./.	0/0:5,0:5:15.02:0,15,145	0/0:6,0:6:12.01:0,12,116	0/0:6,0:6:9.01:0,9,87	0/0:8,0:7:12.02:0,12,116	0/0:5,0:5:9.01:0,9,87	./.	1/1:3,3:4:6.02:69,6,0	0/0:1,3:4:3:0,3,29	1/1:2,5:6:2.84:36,3,0	1/1:2,4:5:2.97:20,3,0	1/1:0,3:2:3.01:36,3,0	0/0:2,0:2:3:0,3,29	1/1:2,5:7:9.03:109,9,0	0/0:9,0:9:20.98:0,21,193	1/1:0,7:6:18.06:217,18,0	./.	0/0:11,0:11:5.43:0,5,230	1/1:0,3:2:3.01:36,3,0	1/1:1,3:4:6.02:72,6,0	1/1:4,3:7:9.03:109,9,0	0/0:3,0:3:6.01:0,6,58	1/1:4,1:5:6.02:72,6,0	./.	./.
chr10	9061382	.	AG	A	407.84	PASS	AC=24;AF=0.522;AN=46;BaseQRankSum=2.058;DP=74;FS=3.310;HRun=5;HaplotypeScore=34.3129;InbreedingCoeff=0.4213;MQ=22.96;MQ0=25;MQRankSum=0.769;QD=12.36;ReadPosRankSum=0.935;VQSLOD=0.8439;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:3,0:2:5.78:0,6,31	./.	0/0:12,0:1:2.94:0,3,18	0/0:5,1:2:2.80:0,3,13	0/0:4,0:4:5.54:0,6,25	0/0:3,0:2:5.89:0,6,57	0/0:1,0:1:2.98:0,3,22	0/0:2,0:1:3.01:0,3,33	0/0:1,0:1:0.47:0,0,1	1/1:2,1:2:2.95:35,3,0	1/1:1,1:2:6.02:69,6,0	1/1:1,1:1:3.01:34,3,0	1/1:2,1:1:3.01:36,3,0	1/1:2,1:1:3.01:35,3,0	./.	0/0:1,0:1:2.88:0,3,15	1/1:2,2:2:3.01:37,3,0	0/0:3,0:3:5.98:0,6,47	./.	1/1:0,3:2:6.02:70,6,0	./.	1/1:3,2:4:3.01:35,3,0	1/1:0,1:1:2.96:19,3,0	./.	0/0:1,0:1:2.88:0,3,15	1/1:1,2:2:6.02:71,6,0	1/1:1,2:2:6.02:70,6,0	1/1:0,1:1:3.01:35,3,0
chr10	9061388	.	TA	T	836.13	PASS	AC=38;AF=0.905;AN=42;BaseQRankSum=0.484;DP=70;FS=11.614;HRun=1;HaplotypeScore=32.2547;InbreedingCoeff=0.1167;MQ=19.67;MQ0=31;MQRankSum=1.106;QD=19.91;ReadPosRankSum=2.350;VQSLOD=2.3228;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,2:2:6.02:77,6,0	./.	0/0:13,0:1:2.99:0,3,23	0/0:6,0:1:2.68:0,3,11	1/1:0,4:4:8.89:93,9,0	1/1:1,1:1:3.01:39,3,0	1/1:1,1:1:2.97:20,3,0	./.	1/1:0,1:1:3.01:38,3,0	1/1:2,0:1:3.01:34,3,0	1/1:2,0:2:6.02:70,6,0	1/1:2,0:1:3.01:35,3,0	1/1:2,0:1:3.01:34,3,0	1/1:3,0:1:3.01:35,3,0	./.	1/1:0,1:1:3.01:39,3,0	1/1:4,0:2:3:28,3,0	1/1:0,2:2:6.02:78,6,0	./.	1/1:3,0:2:6.02:68,6,0	./.	1/1:2,0:2:1.53:32,2,0	./.	./.	1/1:0,1:1:3.01:39,3,0	1/1:3,0:2:6.02:69,6,0	1/1:2,0:2:6.02:69,6,0	1/1:1,0:1:3.01:35,3,0
chr10	9061401	.	G	GT	297.40	PASS	AC=30;AF=1.000;AN=30;DP=72;FS=0.000;HRun=0;HaplotypeScore=40.1455;InbreedingCoeff=-0.0185;MQ=16.31;MQ0=46;QD=8.75;VQSLOD=3.0247;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,1:2:5.74:38,6,0	./.	./.	./.	1/1:2,0:2:5.37:36,5,0	./.	./.	./.	1/1:1,0:1:2.68:11,3,0	1/1:2,0:1:2.80:13,3,0	1/1:2,0:2:5.42:22,5,0	1/1:2,0:1:2.60:10,3,0	./.	./.	./.	1/1:2,0:1:2.74:12,3,0	1/1:4,0:1:2.80:13,3,0	1/1:1,1:2:5.85:47,6,0	./.	1/1:1,2:2:5.80:42,6,0	./.	1/1:1,0:1:2.74:12,3,0	./.	./.	1/1:1,0:1:2.74:12,3,0	1/1:2,1:2:5.81:44,6,0	1/1:2,1:2:5.81:47,6,0	1/1:1,0:1:2.80:13,3,0
chr10	9061406	.	GAAACCAGGAAAGA	G	2062.44	PASS	AC=30;AF=1.000;AN=30;DP=76;FS=0.000;HRun=0;HaplotypeScore=40.7987;InbreedingCoeff=-0.1631;MQ=15.71;MQ0=51;QD=55.74;VQSLOD=2.9603;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,1:2:3.01:125,3,0	./.	./.	./.	1/1:0,2:2:6.02:176,6,0	./.	./.	./.	1/1:0,1:1:3.01:126,3,0	1/1:1,1:1:3.01:126,3,0	1/1:1,2:2:6.02:251,6,0	1/1:1,1:1:3.01:126,3,0	./.	./.	./.	1/1:1,1:1:3.01:125,3,0	1/1:3,1:1:3.01:126,3,0	1/1:1,1:2:5.98:145,6,0	./.	1/1:2,1:2:5.95:143,6,0	./.	1/1:0,1:1:3.01:125,3,0	./.	./.	1/1:0,1:1:3.01:125,3,0	1/1:2,1:2:5.98:145,6,0	1/1:2,1:2:5.97:144,6,0	1/1:0,1:1:3.01:126,3,0
chr10	9061466	.	T	TG	244.48	PASS	AB=1.000;AC=23;AF=0.885;AN=26;BaseQRankSum=-1.187;DP=87;FS=0.000;HRun=1;HaplotypeScore=20.3564;InbreedingCoeff=0.1242;MQ=49.19;MQ0=57;MQRankSum=-1.734;QD=5.69;ReadPosRankSum=1.552;VQSLOD=0.3510;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/1:7,0:1:0:0,0,0	0/0:8,0:2:0.47:0,0,1	1/1:0,1:1:2.92:17,3,0	./.	./.	./.	./.	./.	1/1:1,2:2:5.85:34,6,0	1/1:2,0:1:2.94:18,3,0	1/1:5,1:1:2.94:18,3,0	./.	1/1:4,1:1:2.94:18,3,0	1/1:2,2:2:2.94:18,3,0	./.	./.	./.	1/1:0,3:3:8.82:54,9,0	./.	1/1:0,4:4:11.70:68,12,0	1/1:1,1:2:5.87:35,6,0	./.	./.	1/1:3,0:1:2.97:20,3,0	1/1:1,1:1:2.94:18,3,0	./.
chr10	9062249	.	A	ATACATG	1856.60	PASS	AC=24;AF=0.545;AN=44;BaseQRankSum=6.574;DP=151;FS=10.543;HRun=0;HaplotypeScore=39.4345;InbreedingCoeff=0.6839;MQ=60.11;MQ0=1;MQRankSum=-3.430;QD=40.36;ReadPosRankSum=0.048;VQSLOD=1.7437;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:24.08:0,24,538	1/1:2,0:2:3.01:72,3,0	./.	0/0:6,0:4:2.88:0,3,15	0/0:15,0:15:36.09:0,36,699	0/0:9,0:9:21.03:0,21,405	0/0:5,0:5:9.02:0,9,145	0/0:24,0:24:63.12:0,63,882	0/0:2,0:2:6.02:0,6,82	1/1:2,0:1:3.01:59,3,0	./.	1/1:2,0:2:3:25,3,0	1/1:5,0:5:3:25,3,0	1/1:0,2:2:6.02:198,6,0	./.	0/0:3,0:3:6.02:0,6,144	1/1:5,0:5:12.01:221,12,0	0/0:11,0:11:32.91:0,33,549	1/1:6,0:6:14.98:273,15,0	1/1:2,1:3:5.98:119,6,0	./.	./.	1/1:2,0:2:3.01:48,3,0	./.	0/0:7,0:7:12.04:0,12,243	1/1:1,0:1:3.01:55,3,0	1/1:0,10:10:21.07:704,21,0	1/1:4,1:5:11.93:222,12,0
chr10	9062261	.	G	GTA	886.64	PASS	AB=0.856;AC=21;AF=0.477;AN=44;BaseQRankSum=5.725;DP=158;FS=13.143;HRun=0;HaplotypeScore=31.9576;InbreedingCoeff=0.5290;MQ=57.84;MQ0=1;MQRankSum=-3.530;QD=17.05;ReadPosRankSum=-0.183;VQSLOD=1.7601;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:21.05:0,21,246	1/1:1,1:2:3.01:48,3,0	0/0:5,0:2:2.99:0,3,24	0/0:7,0:3:0:0,0,0	0/0:16,0:16:33.09:0,33,394	0/0:10,0:10:24.08:0,24,295	0/0:3,0:4:6:0,6,60	0/0:22,0:22:45.13:0,45,540	1/1:1,2:3:6.02:98,6,0	0/1:2,0:1:0:0,0,0	./.	1/1:1,1:2:3.01:48,3,0	1/1:1,4:5:3.01:48,3,0	1/1:1,2:3:9.02:104,9,0	./.	0/0:5,0:5:9.03:0,9,111	0/1:4,2:6:15.71:42,0,16	0/0:11,0:11:24.08:0,24,295	0/1:7,2:8:5.39:123,0,5	1/1:1,1:2:3.01:39,3,0	./.	./.	./.	./.	0/0:6,0:6:12.04:0,12,148	1/1:1,1:2:6.02:86,6,0	1/1:6,5:10:23.52:268,24,0	1/1:2,3:5:6.60:133,7,0
chr10	9062528	.	GA	G	5885.18	PASS	AB=0.824;AC=33;AF=0.589;AN=56;BaseQRankSum=9.617;DP=517;FS=3.825;HRun=10;HaplotypeScore=55.8775;InbreedingCoeff=0.8861;MQ=73.40;MQ0=2;MQRankSum=1.110;QD=20.22;ReadPosRankSum=6.522;VQSLOD=5.1053;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:51.02:0,51,521	1/1:1,14:15:38.99:339,39,0	0/0:19,0:17:30.02:0,30,299	0/1:11,1:11:13.23:28,0,13	0/0:30,1:31:46.13:0,46,728	0/0:27,0:27:72.19:0,72,796	0/0:9,0:9:24.06:0,24,266	0/0:46,0:44:86.88:0,87,1120	0/0:17,0:17:39.02:0,39,415	1/1:2,17:18:47.99:416,48,0	1/1:2,11:13:32.99:287,33,0	1/1:3,22:25:29.81:488,30,0	1/1:2,14:16:11.81:331,12,0	1/1:1,12:13:32.99:287,33,0	1/1:6,15:21:8.81:305,9,0	0/0:22,0:23:56.99:0,57,612	1/1:2,20:22:53.99:469,54,0	0/0:1,0:12:23.32:0,23,115	1/1:0,15:15:44.99:391,45,0	1/1:1,17:18:50.99:443,51,0	0/0:6,0:6:12.03:0,12,133	1/1:1,10:11:26.99:234,27,0	1/1:1,10:11:29.99:260,30,0	1/1:3,10:13:23.99:208,24,0	0/0:19,0:19:42.08:0,42,453	1/1:2,24:26:71.98:625,72,0	1/1:1,21:22:59.98:521,60,0	1/1:2,15:17:2.83:253,3,0
chr10	9063748	.	AAGAAT	A	13439.24	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=14.645;DP=603;FS=3.593;HRun=0;HaplotypeScore=118.1674;InbreedingCoeff=0.9972;MQ=79.98;MQ0=0;MQRankSum=-3.939;QD=37.64;ReadPosRankSum=4.010;VQSLOD=4.7451;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:81.28:0,81,2312	1/1:4,6:10:21.03:367,21,0	0/0:23,0:23:30.08:0,30,672	0/0:19,0:16:38.76:0,39,851	0/0:43,0:43:99:0,102,2814	0/0:28,0:28:63.22:0,63,1802	0/0:14,0:14:33.11:0,33,959	0/0:29,0:29:66.23:0,66,1889	1/1:7,9:16:21.07:405,21,0	1/1:2,10:12:30.10:562,30,0	1/1:4,15:19:36.08:657,36,0	1/1:7,15:22:30.10:579,30,0	1/1:2,21:23:54.19:1042,54,0	1/1:8,16:24:39.13:753,39,0	1/1:8,19:27:51.17:984,51,0	0/0:17,0:17:42.14:0,42,1207	1/1:6,22:28:42.14:811,42,0	0/0:14,0:14:33.11:0,33,948	1/1:5,16:21:48.16:915,48,0	1/1:3,15:18:47.93:701,48,0	1/1:5,17:22:42.10:773,42,0	1/1:1,12:13:33.07:599,33,0	1/1:5,13:18:36.08:657,36,0	1/1:2,23:25:63.22:1216,63,0	0/0:29,0:29:78.27:0,78,2282	1/1:10,18:28:57.20:1088,57,0	1/1:2,23:25:51.17:984,51,0	1/1:0,6:6:18.06:347,18,0
chr10	9064141	.	TA	T	2579.14	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=11.162;DP=702;FS=5.231;HRun=6;HaplotypeScore=66.2272;InbreedingCoeff=0.9994;MQ=83.57;MQ0=0;MQRankSum=-1.489;QD=26.05;ReadPosRankSum=1.218;VQSLOD=4.1734;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,132,1722	0/0:10,0:10:30.10:0,30,395	0/0:21,0:21:51.04:0,51,603	0/0:21,0:21:52.39:0,52,633	0/0:30,0:30:78.24:0,78,1012	0/0:31,0:31:87.23:0,87,1111	0/0:27,0:27:78.25:0,78,1026	0/0:35,0:35:99:0,99,1301	0/0:22,0:22:60.20:0,60,790	1/1:0,16:16:48.11:508,48,0	1/1:2,13:15:27.06:290,27,0	0/0:26,0:26:75.24:0,75,986	0/0:39,0:39:99:0,114,1499	0/0:36,0:36:96.29:0,96,1235	1/1:4,29:33:81.20:871,81,0	0/0:31,0:31:93.30:0,93,1223	0/0:24,0:24:69.17:0,69,873	0/0:22,0:22:60.20:0,60,789	0/0:25,0:25:69.22:0,69,899	0/0:31,0:31:87.27:0,87,1129	0/0:23,0:23:60.13:0,60,752	0/0:10,0:10:30.10:0,30,394	1/1:1,18:19:57.12:602,57,0	1/1:0,16:16:45.11:484,45,0	0/0:24,0:24:72.23:0,72,947	0/0:26,1:27:42.99:0,43,915	0/0:29,0:29:87.27:0,87,1128	0/0:11,0:11:33.11:0,33,434
chr10	9066151	.	T	TGCTCTCGC	4582.77	PASS	AB=0.889;AC=35;AF=0.625;AN=56;BaseQRankSum=-0.767;DP=680;FS=7.268;HRun=0;HaplotypeScore=209.5805;InbreedingCoeff=0.2430;MQ=74.12;MQ0=20;MQRankSum=-6.059;QD=10.32;ReadPosRankSum=-0.606;VQSLOD=2.9522;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:7,0:29:28.47:33,0,28	1/1:11,0:11:17.90:243,18,0	0/0:64,0:37:69.04:0,69,1390	0/0:81,0:38:51.45:0,51,1241	0/0:16,0:16:12.91:0,13,157	1/1:2,0:16:5.82:33,6,0	0/1:24,0:27:12.52:13,0,103	0/0:7,0:31:51.11:0,51,673	0/1:23,0:23:30.20:49,0,30	0/1:25,0:25:99:115,0,458	0/1:6,0:6:24.76:25,0,51	1/1:16,0:16:9.03:335,9,0	1/1:23,1:24:9.03:280,9,0	1/1:5,15:21:8.81:291,9,0	0/1:25,0:24:59.30:59,0,264	0/1:25,0:27:22.38:22,0,115	1/1:20,0:19:24.06:583,24,0	0/1:3,0:9:13.11:13,0,14	1/1:17,0:17:23.25:626,23,0	1/1:23,0:23:14.94:190,15,0	1/1:23,0:22:3.01:31,3,0	1/1:19,0:19:5.80:122,6,0	0/1:26,0:26:37.94:38,0,254	0/0:28,0:28:16.86:0,17,428	0/0:14,0:14:17.97:0,18,305	1/1:24,0:24:53.46:977,53,0	1/1:12,12:25:14.87:326,15,0	1/1:8,0:8:14.94:179,15,0
chr10	9066152	.	G	GCTCTCGCGCT	5326.38	PASS	AB=0.939;AC=30;AF=0.536;AN=56;BaseQRankSum=-3.650;DP=713;FS=7.272;HRun=0;HaplotypeScore=238.5401;InbreedingCoeff=0.3431;MQ=72.33;MQ0=20;MQRankSum=-6.361;QD=12.59;ReadPosRankSum=0.321;VQSLOD=2.6434;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:28:13.84:23,0,14	1/1:10,0:12:18.03:285,18,0	0/0:64,0:37:89.46:0,89,1597	0/0:82,0:37:75.31:0,75,1465	0/0:16,0:16:12.78:0,13,152	0/0:17,0:17:2.37:0,2,6	0/0:28,0:28:9.87:0,10,149	0/0:32,0:31:39.69:0,40,643	0/1:25,0:25:41.89:45,0,42	0/1:27,0:27:99:186,0,423	0/1:11,0:11:21.25:21,0,52	0/1:5,13:19:1.75:469,0,2	1/1:10,14:25:9.03:291,9,0	1/1:18,0:18:8.83:241,9,0	0/1:32,0:30:55.95:56,0,235	0/0:28,0:28:14.32:0,14,167	1/1:9,11:21:30.03:820,30,0	0/0:9,0:9:3.82:0,4,31	1/1:12,0:16:36.10:783,36,0	1/1:16,0:23:14.80:186,15,0	1/1:27,0:26:3:31,3,0	1/1:19,0:21:8.89:145,9,0	0/1:25,0:25:35.39:35,0,222	0/1:30,0:31:16.77:17,0,344	0/0:14,0:14:17.97:0,18,330	1/1:5,16:25:52.96:1054,53,0	1/1:25,0:26:16.65:436,17,0	1/1:5,0:8:15.05:202,15,0
chr10	9066154	.	T	TCTCG	2393.35	PASS	AB=0.912;AC=28;AF=0.500;AN=56;BaseQRankSum=1.970;DP=727;FS=9.759;HRun=0;HaplotypeScore=211.2825;InbreedingCoeff=-0.2266;MQ=71.33;MQ0=23;MQRankSum=-5.150;QD=4.57;ReadPosRankSum=2.766;VQSLOD=1.3126;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:28:21.86:46,0,22	0/1:11,0:11:1.43:56,0,1	0/0:61,0:35:70.74:0,71,1036	0/0:81,0:35:71.44:0,71,1016	0/0:16,0:15:5:0,5,100	0/1:18,0:19:14.83:82,0,15	0/1:14,0:32:35.40:94,0,35	0/0:32,0:31:18.72:0,19,324	0/1:9,16:25:0.09:126,0,0	0/1:28,0:28:21.04:21,0,290	0/1:11,0:11:37.57:73,0,38	0/1:18,0:18:31.73:137,0,32	1/1:25,0:23:9:132,9,0	1/1:20,0:20:8.88:165,9,0	0/1:32,0:30:45.52:46,0,129	0/1:16,0:32:76.14:76,0,158	1/1:21,0:21:24.07:291,24,0	0/1:8,0:9:35.91:45,0,36	1/1:17,0:16:13.47:227,13,0	0/1:24,0:24:17.11:90,0,17	0/1:27,0:26:36.74:47,0,37	0/1:12,0:22:16.42:53,0,16	0/1:28,0:28:49.36:49,0,99	0/1:33,0:33:15.53:16,0,246	0/0:13,0:13:17.88:0,18,187	1/1:26,0:26:59.58:414,60,0	0/1:24,0:24:15.09:184,0,15	0/1:9,0:9:2.69:92,0,3
chr10	9066156	.	T	TCG	1087.81	PASS	AB=0.973;AC=21;AF=0.375;AN=56;BaseQRankSum=2.852;DP=723;FS=13.476;HRun=0;HaplotypeScore=188.2910;InbreedingCoeff=-0.2076;MQ=70.46;MQ0=23;MQRankSum=-4.410;QD=2.73;ReadPosRankSum=4.141;VQSLOD=1.7221;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:5.62:0,6,66	0/1:10,0:10:4.37:58,0,4	0/0:61,0:35:86.40:0,86,990	0/0:80,0:34:63.58:0,64,872	0/0:16,0:15:12.15:0,12,135	0/1:21,0:21:2.62:3,0,19	0/1:31,0:31:27.15:27,0,60	0/0:31,0:30:75.45:0,75,481	1/1:21,1:22:8.93:97,9,0	0/0:28,0:27:29.89:0,30,378	0/1:13,0:13:30.09:30,0,35	0/1:18,0:18:28.92:59,0,29	1/1:22,0:21:4.61:66,5,0	0/1:19,0:20:20.80:42,0,21	0/1:32,0:30:13.31:13,0,158	0/0:33,0:33:15.20:0,15,207	0/1:20,0:19:17.89:88,0,18	0/1:8,0:8:3.77:4,0,37	0/1:18,0:16:4.03:174,0,4	0/1:25,0:25:52.77:64,0,53	0/1:8,18:25:39.78:47,0,40	0/1:21,0:21:14.99:40,0,15	0/1:29,0:29:22.83:23,0,82	0/0:33,0:33:13.96:0,14,226	0/0:13,0:13:20.26:0,20,144	0/1:28,0:28:7.70:279,0,8	0/1:24,0:23:57.20:57,0,63	0/1:9,0:9:3.51:78,0,4
chr10	9066160	.	TCG	T	2227.10	PASS	AB=0.988;AC=25;AF=0.446;AN=56;BaseQRankSum=-3.712;DP=713;FS=39.688;HRun=0;HaplotypeScore=171.5032;InbreedingCoeff=-0.2060;MQ=68.43;MQ0=25;MQRankSum=-1.320;QD=4.43;ReadPosRankSum=-3.921;VQSLOD=0.5097;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:32,0:32:2.15:110,0,2	0/1:9,0:9:10.31:65,0,10	0/0:60,0:34:55.24:0,55,800	0/0:77,0:30:54.09:0,54,753	0/1:16,0:15:2.12:102,0,2	0/1:22,0:22:2.79:59,0,3	0/1:29,0:29:18.27:79,0,18	1/1:34,0:33:42.27:473,42,0	0/1:20,1:21:10.86:36,0,11	0/1:28,0:27:20.18:20,0,437	0/0:15,0:15:8.50:0,9,59	0/1:16,0:16:27.05:34,0,27	0/1:25,0:23:1.16:93,0,1	0/1:20,0:20:12.51:30,0,13	0/1:31,0:28:27.88:28,0,224	0/1:31,1:32:48.05:136,0,48	1/1:16,0:15:7.08:65,7,0	0/0:5,0:5:6.74:0,7,40	0/1:18,0:15:57.36:135,0,57	0/1:25,0:25:16.66:56,0,17	0/0:22,0:21:4.14:0,4,26	0/1:23,0:23:0.03:65,0,0	0/1:33,0:33:99:106,0,140	0/0:31,0:31:16.06:0,16,199	0/1:14,3:17:5.79:183,0,6	1/1:27,0:27:49.64:441,50,0	0/1:20,0:19:24.72:25,0,30	0/1:9,0:8:2.32:48,0,2
chr10	9068058	.	TCG	T	6264.83	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-0.596;DP=475;FS=3.810;HRun=0;HaplotypeScore=83.5322;InbreedingCoeff=0.9416;MQ=67.04;MQ0=12;MQRankSum=-3.224;QD=20.47;ReadPosRankSum=0.732;VQSLOD=4.9386;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,0:9:4.17:104,4,0	1/1:6,2:8:21.83:166,22,0	0/0:25,0:9:26.80:0,27,354	0/0:36,0:21:36.02:0,36,587	1/1:23,0:23:50.47:432,50,0	1/1:18,0:18:30.23:251,30,0	1/1:11,0:10:20.97:177,21,0	1/1:27,0:27:77.51:665,78,0	0/0:11,0:11:23.44:0,23,155	0/0:23,0:22:49.32:0,49,425	0/0:14,0:14:35.43:0,35,251	1/1:15,3:18:47.85:409,48,0	1/1:23,0:23:65.68:539,66,0	1/1:13,2:13:27.73:225,28,0	0/0:21,0:21:11.76:0,12,94	1/1:19,0:19:39.15:423,39,0	1/1:14,1:15:33.77:266,34,0	1/1:8,0:8:20.98:190,21,0	1/1:18,0:17:47.96:423,48,0	1/1:20,0:20:47.96:406,48,0	0/0:14,0:14:41.44:0,41,303	1/1:19,1:20:44.89:368,45,0	0/0:11,0:11:23.80:0,24,221	0/0:14,0:13:3:0,3,26	1/1:12,0:12:32.99:283,33,0	1/1:15,0:15:44.94:395,45,0	1/1:13,2:14:35.90:298,36,0	1/1:12,0:11:29.96:246,30,0
chr10	9068070	.	TCTCTCC	T	6495.43	PASS	AB=1.000;AC=43;AF=0.768;AN=56;BaseQRankSum=-2.252;DP=536;FS=2.609;HRun=0;HaplotypeScore=124.7690;InbreedingCoeff=0.3816;MQ=57.56;MQ0=22;MQRankSum=-0.678;QD=14.24;ReadPosRankSum=-0.704;VQSLOD=4.1978;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:6.38:0,6,58	1/1:5,2:7:15.01:162,15,0	0/0:22,0:6:11.76:0,12,80	0/1:30,0:15:17.42:17,0,122	1/1:24,0:24:35.97:340,36,0	1/1:23,0:23:8.39:201,8,0	1/1:15,0:14:21.37:175,21,0	1/1:17,0:17:40.73:347,41,0	1/1:9,0:9:6.88:73,7,0	1/1:20,0:19:23.24:381,23,0	0/1:22,0:22:55.51:255,0,56	1/1:22,0:21:3.02:275,3,0	1/1:27,0:26:31.01:376,31,0	0/1:16,0:14:0.96:158,0,1	0/0:22,0:22:2.70:0,3,25	1/1:23,0:23:40.09:514,40,0	1/1:18,1:19:44.07:361,44,0	1/1:13,0:12:23.35:214,23,0	1/1:17,0:14:36.77:302,37,0	1/1:32,0:31:43.81:357,44,0	1/1:20,0:20:54.87:484,55,0	0/1:25,0:25:12.48:366,0,12	0/1:11,0:11:54.57:55,0,136	0/0:23,0:20:5.98:0,6,47	1/1:14,0:14:21.93:181,22,0	1/1:18,0:17:31.13:344,31,0	1/1:16,1:16:35.40:341,35,0	1/1:15,0:12:26.13:218,26,0
chr10	9068074	.	TCC	T	8030.46	PASS	AB=1.000;AC=52;AF=0.929;AN=56;BaseQRankSum=-1.224;DP=540;FS=18.795;HRun=3;HaplotypeScore=90.3641;InbreedingCoeff=0.3401;MQ=55.66;MQ0=25;MQRankSum=-1.995;QD=15.47;ReadPosRankSum=-1.102;VQSLOD=0.8169;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:12,0:12:2.21:64,0,2	1/1:6,0:6:17.36:135,17,0	0/0:21,0:6:11.60:0,12,80	0/1:29,0:13:17.11:17,0,123	1/1:18,6:24:35.97:308,36,0	1/1:24,0:24:39.14:323,39,0	1/1:15,1:15:3.42:175,3,0	1/1:17,0:17:50.25:392,50,0	1/1:8,0:8:14.71:117,15,0	1/1:21,1:20:50.66:516,51,0	1/1:22,0:22:51.07:426,51,0	1/1:19,3:20:44.85:385,45,0	1/1:29,0:28:71.89:593,72,0	1/1:13,2:13:23.44:182,23,0	1/1:0,22:22:2.78:45,3,0	1/1:21,1:22:35.97:426,36,0	1/1:20,0:20:45.72:354,46,0	1/1:14,0:13:29.35:237,29,0	1/1:17,0:14:41.93:362,42,0	1/1:31,0:30:53.64:446,54,0	1/1:20,0:20:56.85:470,57,0	1/1:26,0:26:58.59:472,59,0	1/1:13,0:13:3.38:153,3,0	1/1:1,22:21:6.02:91,6,0	1/1:13,0:13:29.99:257,30,0	1/1:19,0:18:53.91:468,54,0	1/1:17,0:16:44.78:355,45,0	1/1:16,0:12:32.59:263,33,0
chr10	9068656	.	G	GA	4281.72	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-3.316;DP=547;FS=26.333;HRun=9;HaplotypeScore=100.5864;InbreedingCoeff=0.9545;MQ=69.13;MQ0=0;MQRankSum=-4.911;QD=22.78;ReadPosRankSum=-2.489;VQSLOD=2.9315;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,15:19:45.12:497,45,0	0/0:11,0:11:23.99:0,24,208	0/0:11,0:11:7.12:0,7,54	0/0:9,0:9:7.69:0,8,58	1/1:7,28:36:45.82:647,46,0	1/1:5,16:20:51.12:554,51,0	1/1:3,6:11:26.74:261,27,0	1/1:14,17:32:37.41:612,37,0	0/0:22,0:22:62.99:0,63,547	0/0:24,0:24:19.92:0,20,66	0/0:23,0:23:32.40:0,32,90	0/0:14,0:14:41.99:0,42,365	0/0:18,0:18:44.99:0,45,391	0/0:18,1:19:17.80:0,18,383	0/0:20,0:20:26.96:0,27,76	1/1:4,12:16:39.57:425,40,0	0/0:18,0:18:50.99:0,51,442	1/1:7,15:23:59.94:622,60,0	0/0:16,0:16:41.98:0,42,364	0/0:38,1:39:65.79:0,66,800	0/0:11,0:11:32.98:0,33,282	0/0:21,0:21:62.99:0,63,547	0/0:24,0:24:28.77:0,29,81	0/0:4,0:4:6.48:0,6,18	1/1:7,22:30:42.92:663,43,0	0/0:24,0:24:67.53:0,68,575	0/0:21,1:22:26.80:0,27,462	0/0:9,0:9:26.98:0,27,231
chr10	9068663	.	AAAC	A	3806.09	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=3.005;DP=545;FS=1.363;HRun=0;HaplotypeScore=124.5523;InbreedingCoeff=0.9709;MQ=65.97;MQ0=0;MQRankSum=3.096;QD=40.06;ReadPosRankSum=1.907;VQSLOD=4.9351;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:50.90:0,51,687	0/0:10,0:10:27.07:0,27,528	0/0:8,0:8:10.90:0,11,117	0/0:8,0:8:9.82:0,10,171	0/0:35,0:35:76.19:0,76,1261	0/0:19,0:19:33.72:0,34,725	0/0:11,0:11:27.08:0,27,374	0/0:35,0:35:67.64:0,68,1199	0/0:22,0:22:63.22:0,63,1324	1/1:3,20:23:63.15:904,63,0	1/1:0,25:25:75.04:1043,75,0	0/0:15,0:15:45.14:0,45,905	0/0:16,0:16:48.15:0,48,969	0/0:20,0:20:59.22:0,59,1142	1/1:0,19:19:51.17:802,51,0	0/0:17,0:17:51.15:0,51,746	0/0:19,0:19:57.07:0,57,1063	0/0:23,0:23:68.39:0,68,934	0/0:19,0:19:54:0,54,997	0/0:37,0:37:99:0,111,2156	0/0:12,0:12:36.12:0,36,734	0/0:23,0:23:69.22:0,69,1383	1/1:0,24:24:57.15:868,57,0	1/1:0,4:4:12.04:189,12,0	0/0:29,0:29:62.15:0,62,1249	0/0:22,1:23:22:0,22,1281	0/0:22,0:22:66.21:0,66,1323	0/0:9,0:9:27.09:0,27,565
chr10	9068700	.	GT	G	6144.94	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=11.335;DP=512;FS=2.438;HRun=6;HaplotypeScore=98.5357;InbreedingCoeff=0.9817;MQ=66.37;MQ0=0;MQRankSum=-2.658;QD=28.06;ReadPosRankSum=-0.446;VQSLOD=4.6730;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,15:16:33.07:349,33,0	0/0:8,0:8:21.07:0,21,276	0/0:10,0:10:12.16:0,12,107	0/0:4,0:4:8.03:0,8,67	1/1:2,35:37:93.21:974,93,0	1/1:0,20:20:54.13:571,54,0	1/1:1,10:11:30.08:322,30,0	1/1:1,32:33:93.61:952,94,0	1/1:0,21:21:60.15:641,60,0	0/0:20,0:20:42.30:0,42,249	0/0:23,0:23:35.37:0,35,361	0/0:12,0:12:33.11:0,33,434	0/0:15,0:15:42.14:0,42,552	0/0:15,0:15:45.15:0,45,590	0/0:18,0:18:44.24:0,44,286	1/1:2,18:20:57.14:611,57,0	0/0:17,0:17:45.15:0,45,592	1/1:2,16:19:48.12:512,48,0	0/0:20,0:20:57.15:0,57,703	0/0:27,0:27:78.24:0,78,1012	1/1:1,13:14:36.09:387,36,0	0/0:21,0:21:60.20:0,60,788	0/0:24,0:24:58.74:0,59,389	0/0:5,0:5:14.75:0,15,97	1/1:2,26:28:78.19:825,78,0	0/0:17,0:17:39.02:0,39,490	0/0:21,0:21:63.20:0,63,827	0/0:16,0:16:48.16:0,48,632
chr10	9069769	.	C	CT	21665.68	PASS	AB=1.000;AC=49;AF=0.875;AN=56;BaseQRankSum=-6.005;DP=694;FS=1.700;HRun=5;HaplotypeScore=72.9482;InbreedingCoeff=0.8494;MQ=70.32;MQ0=0;MQRankSum=-2.254;QD=33.75;ReadPosRankSum=2.784;VQSLOD=5.4256;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,34:35:99:1302,99,0	1/1:1,5:6:15.05:197,15,0	0/0:9,0:9:9.04:0,9,164	0/1:13,0:13:5.83:6,0,186	1/1:1,31:32:90.25:1150,90,0	1/1:0,26:26:72.23:947,72,0	1/1:2,17:19:42.14:553,42,0	1/1:5,27:32:81.26:1062,81,0	0/0:26,0:26:75.19:0,75,806	1/1:1,29:30:90.29:1183,90,0	1/1:0,27:27:81.26:1066,81,0	1/1:3,17:20:33.11:434,33,0	1/1:2,37:39:99:1342,102,0	1/1:1,22:23:57.19:748,57,0	1/1:3,36:39:99:1302,99,0	1/1:2,25:27:75.24:987,75,0	1/1:2,18:20:54.17:701,54,0	1/1:2,15:17:42.14:553,42,0	1/1:3,21:24:63.20:829,63,0	1/1:1,23:24:69.22:908,69,0	0/0:17,0:17:51.13:0,51,548	1/1:1,31:32:90.25:1163,90,0	1/1:0,31:31:81.03:1066,81,0	1/1:2,14:16:39.13:513,39,0	1/1:1,33:34:81.26:1066,81,0	1/1:2,31:33:96.30:1246,96,0	1/1:4,29:33:75.24:987,75,0	1/1:0,10:10:27.09:354,27,0
chr10	9070768	.	G	GTA	4140.56	PASS	AB=0.550;AC=43;AF=0.860;AN=50;BaseQRankSum=-1.462;DP=262;FS=0.000;HRun=0;HaplotypeScore=50.9430;InbreedingCoeff=0.2200;MQ=70.18;MQ0=0;MQRankSum=-0.108;QD=17.62;ReadPosRankSum=2.458;VQSLOD=3.0366;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,0:11:6:53,6,0	1/1:2,2:4:6.02:99,6,0	0/0:6,0:5:6.85:0,7,49	0/0:13,0:10:3.23:0,3,18	1/1:4,0:7:5.04:32,5,0	1/1:2,1:10:12:106,12,0	1/1:1,0:5:3:26,3,0	1/1:15,3:44:62.36:454,62,0	1/1:4,0:7:6:53,6,0	1/1:3,0:9:11.94:105,12,0	./.	1/1:2,4:6:9.03:148,9,0	1/1:3,6:10:18.06:296,18,0	0/1:1,4:5:28.42:89,0,28	./.	1/1:5,0:5:5.99:50,6,0	1/1:2,10:12:21.07:347,21,0	1/1:5,1:12:20.72:185,21,0	1/1:3,9:12:24.08:393,24,0	1/1:3,6:9:15.05:248,15,0	1/1:1,0:11:21.01:186,21,0	1/1:0,1:1:3.01:50,3,0	1/1:3,0:3:3:25,3,0	./.	1/1:6,0:13:12:106,12,0	0/1:2,10:12:4.42:462,0,4	1/1:3,10:13:27.09:445,27,0	0/1:2,9:11:8.76:183,0,9
chr10	9070940	.	TTC	T	8385.49	PASS	AC=36;AF=0.667;AN=54;BaseQRankSum=-0.273;DP=453;FS=20.710;HRun=0;HaplotypeScore=65.8875;InbreedingCoeff=0.9513;MQ=66.39;MQ0=13;MQRankSum=-2.650;QD=31.52;ReadPosRankSum=-1.742;VQSLOD=4.1305;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:18,5:23:31.34:405,31,0	1/1:2,0:2:6.02:82,6,0	0/0:29,0:13:39.13:0,39,700	0/0:37,0:15:36.09:0,36,586	1/1:13,1:14:36.07:502,36,0	1/1:12,1:13:14.03:381,14,0	1/1:21,6:27:56.77:799,57,0	1/1:29,4:33:84.28:1265,84,0	0/0:12,0:11:33.10:0,33,527	0/0:20,0:19:51.05:0,51,833	0/0:10,0:10:30.03:0,30,473	1/1:4,3:7:11.80:150,12,0	1/1:13,0:12:18.06:274,18,0	1/1:9,3:12:23.78:315,24,0	0/0:20,0:19:45.14:0,45,752	1/1:14,2:15:42.63:536,43,0	1/1:8,0:8:21.07:309,21,0	1/1:10,2:12:33.11:466,33,0	1/1:15,4:19:57.14:796,57,0	1/1:1,15:16:6.02:73,6,0	0/0:18,0:17:51.17:0,51,820	./.	0/0:17,0:17:46.71:0,47,782	0/0:10,0:9:13.24:0,13,155	1/1:12,1:13:33.10:477,33,0	1/1:18,0:18:54.13:800,54,0	1/1:12,1:13:39.09:498,39,0	1/1:6,1:7:18.06:257,18,0
chr10	9070987	.	C	CTCT	1884.74	PASS	AB=0.831;AC=39;AF=0.750;AN=52;BaseQRankSum=-3.575;DP=360;FS=4.008;HRun=0;HaplotypeScore=64.3184;InbreedingCoeff=0.0887;MQ=62.71;MQ0=57;MQRankSum=-1.511;QD=6.35;ReadPosRankSum=0.866;VQSLOD=1.9783;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:17,0:14:5.96:31,0,6	1/1:1,0:3:3.01:30,3,0	0/0:21,0:10:29.92:0,30,303	0/0:21,0:8:13:0,13,144	1/1:10,0:9:3.01:39,3,0	0/1:18,0:16:0.26:26,0,0	0/1:16,0:16:7.27:60,0,7	1/1:24,0:22:38.54:243,39,0	0/1:14,0:12:30.96:151,0,31	1/1:3,0:11:1.01:184,1,0	./.	1/1:6,0:9:9.02:117,9,0	1/1:4,0:14:5.59:78,6,0	1/1:2,0:12:5.95:92,6,0	1/1:2,9:12:2.71:67,3,0	0/1:5,0:11:28.73:85,0,29	1/1:1,0:8:6.90:74,7,0	0/1:6,0:5:5.44:18,0,5	0/1:10,0:6:3.78:91,0,4	1/1:3,0:4:3:27,3,0	1/1:7,0:1:3.01:30,3,0	./.	1/1:7,0:7:6.58:58,7,0	1/1:5,6:8:1.50:65,1,0	0/0:12,0:10:2.88:0,3,15	1/1:10,0:10:23.89:194,24,0	1/1:15,0:18:19.51:183,20,0	1/1:2,0:4:4.64:81,5,0
chr10	9072226	.	T	TGAGTGGGTGGAAGTGGCATAGGC	14548.96	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=9.744;DP=525;FS=100.264;HRun=0;HaplotypeScore=574.3417;InbreedingCoeff=0.1008;MQ=80.70;MQ0=1;MQRankSum=-9.485;QD=65.54;ReadPosRankSum=1.281;VQSLOD=1.3988;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:23:32.70:2747,0,33	0/0:9,0:9:1.59:0,2,703	0/1:23,0:23:8.06:8,0,1825	0/1:19,0:19:74.84:75,0,1061	0/1:21,0:20:56.08:1449,0,56	0/1:15,0:15:37.81:1746,0,38	0/1:33,0:33:94.55:2999,0,95	0/1:15,0:15:20.97:962,0,21	1/1:0,1:11:6.02:625,6,0	0/0:32,0:32:43.62:0,44,2582	0/0:19,0:19:22.63:0,23,1224	0/0:24,0:24:52.77:0,53,2795	0/0:19,0:19:13.45:0,13,1155	0/0:20,0:20:48.91:0,49,2031	0/0:20,0:20:14.66:0,15,1819	1/1:26,0:26:18.67:1782,19,0	0/0:14,0:14:26.43:0,26,919	0/1:11,0:11:22.82:947,0,23	0/0:17,0:17:48.10:0,48,1362	0/0:21,0:21:33.77:0,34,1459	1/1:8,0:8:5.93:313,6,0	0/0:17,0:17:15.34:0,15,1765	0/0:25,0:25:31.17:0,31,1767	0/0:18,0:18:24.50:0,24,798	0/1:17,0:17:41.86:898,0,42	0/0:17,0:17:36.52:0,37,1505	0/0:28,0:28:17.12:0,17,2787	0/0:3,0:3:9.03:0,9,550
chr10	9073815	.	CA	C	1706.09	PASS	AB=0.696;AC=51;AF=0.911;AN=56;BaseQRankSum=2.314;DP=332;FS=3.132;HRun=17;HaplotypeScore=98.4824;InbreedingCoeff=0.3148;MQ=60.06;MQ0=7;MQRankSum=-2.534;QD=6.23;ReadPosRankSum=2.165;VQSLOD=2.9788;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,9:21:10.65:81,11,0	1/1:0,6:6:17.42:96,17,0	0/0:27,0:6:2.97:0,3,20	0/0:31,0:14:2.92:0,3,17	1/1:8,11:22:11.29:143,11,0	1/1:11,9:21:24.17:128,24,0	1/1:4,5:9:5.64:33,6,0	1/1:12,8:21:14.48:84,14,0	1/1:5,0:10:6.06:17,6,0	1/1:1,0:8:14.04:40,14,0	1/1:2,0:13:20.23:56,20,0	1/1:3,5:9:18.39:97,18,0	1/1:0,4:4:11.61:65,12,0	1/1:1,4:5:11.61:65,12,0	1/1:1,0:8:14.18:39,14,0	1/1:10,3:15:1.27:80,1,0	1/1:1,3:3:8.40:43,8,0	1/1:13,2:17:10.67:71,11,0	1/1:2,6:10:21.48:108,21,0	1/1:2,4:6:8.66:49,9,0	1/1:2,0:9:10.16:29,10,0	1/1:0,2:2:5.81:33,6,0	1/1:1,0:9:14.73:41,15,0	1/1:1,0:4:3.53:10,4,0	0/1:9,6:16:27.11:95,0,27	1/1:1,6:9:21.49:109,21,0	1/1:1,12:13:34.83:193,35,0	1/1:2,1:3:2.81:16,3,0
chr10	9075716	.	G	GCA	11604.29	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=-2.428;DP=809;FS=2.549;HRun=0;HaplotypeScore=172.5780;InbreedingCoeff=0.9974;MQ=64.83;MQ0=6;MQRankSum=0.289;QD=27.30;ReadPosRankSum=4.473;VQSLOD=6.0765;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:77.90:0,78,1026	1/1:1,10:11:23.91:389,24,0	0/0:38,0:28:38.51:0,39,494	0/0:35,0:27:40.31:0,40,542	0/0:26,0:27:69.22:0,69,843	0/0:33,0:33:75.23:0,75,916	0/0:27,0:27:60.19:0,60,733	0/0:31,0:32:57.13:0,57,664	0/0:33,0:35:89.93:0,90,1042	1/1:8,3:43:69.40:928,69,0	1/1:6,2:29:42:393,42,0	1/1:4,22:26:63.22:1018,63,0	1/1:5,24:29:26.54:937,27,0	1/1:6,23:29:32.95:988,33,0	1/1:7,0:42:77.98:688,78,0	0/0:25,0:25:68.24:0,68,813	1/1:3,14:17:39.13:632,39,0	0/0:10,0:10:27.08:0,27,330	1/1:8,9:17:33.07:507,33,0	1/1:3,25:28:63.22:1022,63,0	0/0:39,0:43:95.79:0,96,1105	1/1:7,26:33:49.99:1285,50,0	1/1:5,1:27:30:287,30,0	1/1:5,1:26:42:393,42,0	0/0:28,0:28:69.22:0,69,843	1/1:6,20:26:32.54:1006,33,0	1/1:8,23:32:20.52:839,21,0	1/1:2,7:9:18.06:292,18,0
chr10	9076029	.	C	CT	13212.57	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-15.648;DP=615;FS=0.332;HRun=6;HaplotypeScore=54.3333;InbreedingCoeff=0.9897;MQ=82.08;MQ0=0;MQRankSum=-1.929;QD=31.84;ReadPosRankSum=2.567;VQSLOD=5.1323;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,16:19:48.14:590,48,0	1/1:0,11:11:27.09:340,27,0	0/0:25,0:24:57.09:0,57,565	0/0:19,0:17:35.84:0,36,324	1/1:2,28:30:81.19:999,81,0	1/1:2,29:31:87.28:1094,87,0	1/1:0,18:18:51.16:642,51,0	1/1:2,36:38:99:1212,102,0	0/0:21,0:21:63.11:0,63,628	0/0:31,0:31:81.11:0,81,806	0/0:25,0:25:63.10:0,63,626	1/1:1,19:20:54.17:679,54,0	1/1:1,22:23:63.20:792,63,0	1/1:5,18:23:48.15:604,48,0	0/0:27,0:27:78.13:0,78,780	1/1:0,22:22:57.18:717,57,0	1/1:0,11:11:24.08:302,24,0	1/1:5,4:9:15.05:185,15,0	1/1:4,15:19:48.11:576,48,0	1/1:2,30:32:81.26:1014,81,0	0/0:6,0:6:15.03:0,15,153	1/1:4,24:28:72.23:904,72,0	0/0:31,0:31:90.16:0,90,905	0/0:15,0:15:39.09:0,39,398	1/1:2,28:30:78.25:980,78,0	1/1:3,20:23:57.18:716,57,0	1/1:4,20:24:57.18:715,57,0	1/1:0,4:4:12.04:151,12,0
chr10	9076908	.	TA	T	4865.63	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-12.163;DP=680;FS=7.305;HRun=1;HaplotypeScore=160.9832;InbreedingCoeff=0.9997;MQ=86.05;MQ0=0;MQRankSum=-4.319;QD=39.88;ReadPosRankSum=2.710;VQSLOD=3.7522;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:99:0,99,1438	0/0:14,0:14:42.13:0,42,611	0/0:24,0:24:72.25:0,72,1148	0/0:22,0:22:63.03:0,63,923	0/0:24,0:24:69.21:0,69,1008	0/0:30,0:30:90.24:0,90,1267	0/0:20,0:20:60.20:0,60,901	0/0:34,0:34:99:0,99,1487	0/0:25,0:25:75.22:0,75,1087	1/1:0,29:29:87.29:1217,87,0	1/1:0,25:25:72.24:1007,72,0	0/0:26,0:26:78.24:0,78,1126	0/0:24,0:24:69.21:0,69,1017	0/0:28,0:28:81.24:0,81,1182	1/1:0,26:26:72.24:1006,72,0	0/0:23,0:23:69.23:0,69,1028	0/0:28,0:28:84.25:0,84,1216	0/0:9,0:9:27.09:0,27,404	0/0:11,0:11:33.06:0,33,423	0/0:23,0:23:66.21:0,66,971	0/0:39,0:39:99:0,114,1712	0/0:23,0:23:69.21:0,69,993	1/1:0,24:24:66.10:923,66,0	1/1:0,18:18:51.17:713,51,0	0/0:30,0:30:90.28:0,90,1312	0/0:29,0:29:87.25:0,87,1248	0/0:27,0:27:78.26:0,78,1166	0/0:12,0:12:36.12:0,36,538
chr10	9078692	.	GGA	G	15560.89	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-6.506;DP=763;FS=13.189;HRun=0;HaplotypeScore=115.2474;InbreedingCoeff=0.8853;MQ=72.83;MQ0=10;MQRankSum=-0.592;QD=24.13;ReadPosRankSum=7.730;VQSLOD=4.0611;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,26:32:60.15:721,60,0	1/1:5,7:12:15.05:185,15,0	0/0:58,0:31:38.12:0,38,433	0/0:60,0:41:49.83:0,50,624	1/1:1,32:33:75.19:906,75,0	1/1:3,32:35:69.22:849,69,0	1/1:6,22:27:45.14:554,45,0	1/1:8,19:27:57.18:702,57,0	1/1:4,11:15:33.10:406,33,0	1/1:9,25:34:81.22:970,81,0	1/1:5,22:28:66:772,66,0	1/1:3,18:21:38.85:480,39,0	1/1:8,22:29:60.19:738,60,0	1/1:6,22:28:57.18:697,57,0	1/1:5,22:27:51.16:628,51,0	1/1:3,14:17:33.10:406,33,0	1/1:4,28:32:63.20:775,63,0	1/1:3,6:9:1.08:202,1,0	1/1:6,10:16:30.09:369,30,0	1/1:6,19:26:41.88:459,42,0	1/1:4,16:20:30.09:369,30,0	1/1:4,15:20:41.96:494,42,0	1/1:4,27:31:56.99:702,57,0	1/1:3,17:20:38.79:480,39,0	1/1:6,22:28:51.16:628,51,0	1/1:4,21:25:63.18:762,63,0	1/1:6,23:30:63.03:752,63,0	1/1:3,18:20:45.14:554,45,0
chr10	9079512	.	AG	A	8712.22	PASS	AB=0.923;AC=23;AF=0.411;AN=56;BaseQRankSum=15.178;DP=601;FS=0.312;HRun=1;HaplotypeScore=57.8255;InbreedingCoeff=0.9294;MQ=77.69;MQ0=0;MQRankSum=-1.754;QD=36.00;ReadPosRankSum=4.484;VQSLOD=4.8722;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:54.16:0,54,835	1/1:0,14:14:39.13:545,39,0	0/0:17,1:18:50.92:0,51,710	0/0:10,0:10:23.16:0,23,387	0/0:38,0:38:99:0,114,1816	0/0:28,0:28:84.23:0,84,1313	0/0:18,0:18:54.15:0,54,815	0/0:30,0:30:90.30:0,90,1415	0/0:18,0:18:54.18:0,54,863	0/0:31,0:31:93.10:0,93,1444	0/0:25,0:25:75.21:0,75,1127	1/1:0,23:23:57.19:797,57,0	1/1:0,24:24:66.22:922,66,0	1/1:1,26:27:78.24:1072,78,0	0/0:29,0:29:87.23:0,87,1358	0/0:23,0:23:69.22:0,69,1078	1/1:0,21:21:60.16:816,60,0	0/1:11,1:12:11.82:12,0,371	1/1:0,17:17:51.15:692,51,0	1/1:0,34:34:90.27:1237,90,0	0/0:10,0:10:30.07:0,30,433	1/1:0,15:15:42.10:565,42,0	0/0:21,0:21:60.20:0,60,955	0/0:18,0:18:48.16:0,48,763	0/0:23,0:23:69.22:0,69,1072	1/1:1,22:23:21.25:840,21,0	1/1:0,24:24:63.21:881,63,0	1/1:0,8:8:24.08:333,24,0
chr10	9079675	.	ATG	A	3673.87	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=0.855;DP=743;FS=14.482;HRun=0;HaplotypeScore=126.9776;InbreedingCoeff=0.9101;MQ=61.26;MQ0=13;MQRankSum=2.228;QD=22.82;ReadPosRankSum=2.608;VQSLOD=3.9025;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:84.26:0,84,1318	0/0:16,0:16:42.13:0,42,657	0/0:31,0:23:41.40:0,41,532	0/0:20,0:12:27.06:0,27,346	0/0:28,0:28:72.21:0,72,1129	0/0:25,0:25:63.21:0,63,997	0/0:21,0:21:48.15:0,48,757	0/0:37,2:39:12.61:0,13,1156	0/0:25,0:25:63.20:0,63,989	1/1:6,33:39:99:1187,102,0	1/1:6,22:28:52.79:652,53,0	0/0:37,0:37:78.26:0,78,1235	0/0:20,0:20:7.93:0,8,616	0/0:26,0:26:54.18:0,54,869	1/1:5,26:30:54.17:674,54,0	0/0:25,0:25:72.19:0,72,1099	0/0:21,0:21:38.68:0,39,526	0/1:16,0:16:1.32:1,0,425	0/0:21,0:18:45.02:0,45,653	0/0:27,0:26:54.18:0,54,859	0/0:22,0:21:63.21:0,63,1026	0/0:36,0:35:69.23:0,69,1088	1/1:3,18:21:42.13:525,42,0	1/1:3,23:26:51.16:636,51,0	0/0:28,0:28:71.98:0,72,1136	0/0:28,0:28:72.23:0,72,1124	0/0:30,0:29:54.18:0,54,872	0/0:13,0:12:18.53:0,19,273
chr10	9079691	.	A	ATG	6612.39	PASS	AB=0.559;AC=19;AF=0.339;AN=56;BaseQRankSum=-11.388;DP=755;FS=4.350;HRun=0;HaplotypeScore=117.2264;InbreedingCoeff=0.7784;MQ=59.87;MQ0=15;MQRankSum=1.092;QD=24.05;ReadPosRankSum=2.917;VQSLOD=5.7291;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,1:45:63.20:0,63,887	0/1:3,15:18:0.80:502,0,1	0/0:32,1:21:27.04:0,27,310	0/0:26,0:13:14.57:0,15,181	0/0:31,0:31:87.22:0,87,1017	0/0:23,0:23:42.87:0,43,570	0/0:24,0:24:54.15:0,54,644	0/0:38,0:38:60.19:0,60,737	0/0:27,0:27:63.16:0,63,737	0/0:38,0:38:92.95:0,93,1101	0/0:28,0:28:60.63:0,61,704	0/1:7,28:37:5.52:909,0,6	1/1:5,20:25:2.39:550,2,0	1/1:5,24:29:20.06:706,20,0	0/0:30,0:30:69.03:0,69,796	0/0:24,0:24:57.16:0,57,688	0/1:6,16:21:40.79:376,0,41	0/0:16,0:16:27.04:0,27,313	1/1:12,12:20:30.10:453,30,0	1/1:9,14:22:33.11:538,33,0	0/0:21,0:20:51.14:0,51,612	1/1:5,25:29:57.19:930,57,0	0/0:23,0:23:57.12:0,57,637	0/0:26,0:26:57.13:0,57,665	0/0:25,0:26:63.02:0,63,740	1/1:10,15:26:46.94:713,47,0	1/1:4,26:29:41.93:771,42,0	1/1:5,6:10:11.97:165,12,0
chr10	9080029	.	G	GA	5301.71	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-15.434;DP=661;FS=1.954;HRun=8;HaplotypeScore=60.2925;InbreedingCoeff=0.9897;MQ=82.10;MQ0=0;MQRankSum=-0.837;QD=28.50;ReadPosRankSum=0.611;VQSLOD=5.2777;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,26:26:78.23:900,78,0	0/0:10,0:10:30.02:0,30,275	0/0:19,0:19:39:0,39,356	0/0:17,0:17:32.96:0,33,290	1/1:3,30:34:83.97:918,84,0	1/1:1,22:24:66.03:742,66,0	1/1:1,16:17:42.12:485,42,0	1/1:8,27:35:81.16:872,81,0	0/0:26,0:26:72.03:0,72,659	0/0:23,0:23:60.02:0,60,549	0/0:25,0:26:68.06:0,68,609	0/0:18,0:18:45.01:0,45,407	0/0:38,0:38:96.02:0,96,879	0/0:25,0:25:72.02:0,72,655	0/0:23,0:23:66.03:0,66,600	1/1:0,29:29:72.21:831,72,0	0/0:14,0:14:33.01:0,33,302	1/1:0,5:5:9.03:104,9,0	0/0:18,0:18:45.02:0,45,412	0/0:32,1:33:49.42:0,49,707	0/0:25,0:25:66.03:0,66,604	0/0:16,0:17:50.06:0,50,445	0/0:32,0:32:90.04:0,90,822	0/0:32,0:32:83.96:0,84,755	1/1:3,13:16:39.12:450,39,0	0/0:25,0:25:66.03:0,66,604	0/0:41,0:41:99:0,108,988	0/0:13,0:13:24.01:0,24,220
chr10	9081194	.	AC	A	15099.17	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=15.961;DP=756;FS=0.266;HRun=2;HaplotypeScore=74.8078;InbreedingCoeff=0.9988;MQ=84.11;MQ0=0;MQRankSum=-4.849;QD=36.56;ReadPosRankSum=3.468;VQSLOD=5.4358;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,117,1744	1/1:0,12:12:33.11:429,33,0	0/0:23,0:23:66.17:0,66,940	0/0:26,0:26:45.46:0,45,812	0/0:29,0:29:84.28:0,84,1255	0/0:33,0:33:99:0,99,1464	0/0:24,0:24:66.22:0,66,989	0/0:34,0:34:99:0,102,1523	0/0:35,0:35:99:0,105,1572	1/1:0,27:27:81.25:1038,81,0	1/1:1,20:21:60.19:774,60,0	1/1:0,29:29:75.24:974,75,0	1/1:0,35:35:99:1363,105,0	1/1:0,31:31:84.27:1091,84,0	1/1:1,43:44:99:1558,120,0	0/0:32,0:32:96.32:0,96,1435	1/1:0,19:19:54.18:701,54,0	0/0:7,0:7:18.06:0,18,269	1/1:0,25:25:75.20:942,75,0	1/1:0,30:30:90.29:1168,90,0	0/0:37,0:37:99:0,111,1663	1/1:0,24:24:69.22:895,69,0	1/1:0,21:21:54.18:701,54,0	1/1:0,27:27:78.25:1013,78,0	0/0:23,0:23:69.23:0,69,1033	1/1:2,29:31:90.24:1128,90,0	1/1:1,20:21:54.17:699,54,0	1/1:0,16:16:48.16:623,48,0
chr10	9081788	.	AAT	A	1042.39	PASS	AC=20;AF=0.385;AN=52;BaseQRankSum=-1.524;DP=142;FS=5.283;HRun=0;HaplotypeScore=40.4609;InbreedingCoeff=0.6359;MQ=73.22;MQ0=4;MQRankSum=-0.122;QD=21.72;ReadPosRankSum=0.882;VQSLOD=2.7810;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:0,0:2:6.01:0,6,59	1/1:0,1:1:2.98:21,3,0	0/0:6,0:3:9.03:0,9,152	0/0:15,0:8:8.76:0,9,81	0/0:0,0:3:6:0,6,54	0/0:1,0:2:3:0,3,27	0/0:1,0:2:3:0,3,27	0/0:13,0:24:58.74:0,59,489	0/0:6,0:6:9.03:0,9,147	0/0:5,0:5:9.03:0,9,153	0/0:5,0:5:9.03:0,9,153	1/1:2,1:3:3.01:39,3,0	1/1:0,4:4:9.03:114,9,0	./.	0/0:1,0:1:3.01:0,3,51	0/0:0,0:1:3:0,3,27	1/1:2,6:8:20.96:217,21,0	0/0:6,0:10:14.23:0,14,125	1/1:2,3:5:12.03:143,12,0	1/1:0,5:5:12.04:156,12,0	0/0:2,0:2:3.01:0,3,51	1/1:0,1:1:3.01:39,3,0	0/0:3,0:3:9.03:0,9,153	./.	0/0:0,0:3:9:0,9,80	1/1:1,1:2:3.01:39,3,0	1/1:3,3:6:9.03:117,9,0	1/1:2,11:13:27.05:332,27,0
chr10	9081806	.	CAT	C	742.20	PASS	AB=1.000;AC=18;AF=0.643;AN=28;BaseQRankSum=-1.452;DP=135;FS=6.340;HRun=0;HaplotypeScore=40.3316;InbreedingCoeff=0.2892;MQ=86.81;MQ0=7;MQRankSum=-1.140;QD=13.02;ReadPosRankSum=1.234;VQSLOD=2.4006;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:19,0:7:5.98:0,6,58	0/0:34,0:12:4.04:0,4,55	1/1:1,1:2:3.01:37,3,0	1/1:0,1:1:3.01:37,3,0	./.	1/1:7,17:24:4.96:559,5,0	1/1:2,1:3:6:61,6,0	./.	./.	./.	1/1:3,0:3:2.50:9,2,0	./.	./.	1/1:0,1:1:3.01:37,3,0	0/1:7,0:7:0.45:10,0,0	1/1:3,1:4:3.01:37,3,0	0/0:3,0:3:2.22:0,2,7	./.	./.	./.	./.	./.	1/1:1,1:3:5.85:51,6,0	./.	0/0:2,0:2:2.99:0,3,23	0/1:9,0:9:6.02:6,0,10
chr10	9081822	.	TCTTAAGC	T	508.41	PASS	AB=0.750;AC=12;AF=0.375;AN=32;BaseQRankSum=1.010;DP=126;FS=29.358;HRun=0;HaplotypeScore=61.2931;InbreedingCoeff=0.4069;MQ=109.24;MQ0=5;MQRankSum=-0.749;QD=12.71;ReadPosRankSum=-0.684;VQSLOD=0.5045;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:1,0:1:3.01:0,3,30	./.	0/1:26,0:11:9.62:10,0,66	0/0:50,0:16:10.75:0,11,128	0/0:1,0:1:3.01:0,3,79	0/0:1,0:1:2.92:0,3,17	./.	0/0:23,0:23:69.24:0,69,1834	0/0:1,0:1:2.50:0,2,9	./.	./.	./.	1/1:0,1:1:3.01:66,3,0	./.	./.	0/0:1,0:1:3.01:0,3,80	1/1:0,7:7:12.04:295,12,0	0/0:3,0:3:8.99:0,9,220	1/1:0,2:2:6.02:165,6,0	0/1:0,1:1:0:0,0,0	./.	./.	./.	./.	0/0:2,0:2:5.91:0,6,84	./.	1/1:1,0:1:2.98:21,3,0	1/1:0,2:2:3.01:65,3,0
chr10	9081842	.	ATC	A	50.69	PASS	AB=0.991;AC=11;AF=0.423;AN=26;BaseQRankSum=4.269;DP=153;FS=17.291;HRun=0;HaplotypeScore=70.0230;InbreedingCoeff=0.2617;MQ=118.62;MQ0=6;MQRankSum=-0.273;QD=0.42;ReadPosRankSum=0.820;VQSLOD=-0.1252;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:1,0:1:3.01:0,3,30	./.	0/1:33,1:19:3.50:3,0,53	0/1:70,0:26:13.71:14,0,50	0/0:1,0:1:3.01:0,3,36	./.	./.	0/0:20,0:20:53.33:0,53,823	1/1:1,0:1:2.97:20,3,0	./.	./.	./.	1/1:1,1:2:3:27,3,0	./.	./.	0/0:1,0:1:3.01:0,3,54	1/1:3,3:6:5.99:54,6,0	0/0:5,0:5:7.27:0,7,165	./.	./.	0/1:3,0:3:0:0,0,0	./.	./.	./.	0/0:2,0:2:3.01:0,3,54	./.	./.	1/1:2,0:2:3.01:32,3,0
chr10	9084027	.	A	AT	18856.63	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-7.196;DP=672;FS=0.628;HRun=7;HaplotypeScore=65.5505;InbreedingCoeff=0.9903;MQ=88.33;MQ0=0;MQRankSum=-10.153;QD=30.12;ReadPosRankSum=4.995;VQSLOD=4.9547;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,17:17:42.13:507,42,0	1/1:1,14:15:39.12:471,39,0	0/0:25,0:25:43.14:0,43,543	0/0:21,0:21:50.72:0,51,474	1/1:4,34:38:96.25:1141,96,0	1/1:2,15:17:42.13:507,42,0	1/1:0,14:14:33.10:399,33,0	1/1:6,29:35:87.24:1026,87,0	1/1:3,32:35:96.29:1159,96,0	1/1:2,25:27:72.21:858,72,0	1/1:3,13:16:36.07:418,36,0	1/1:2,32:34:96.29:1160,96,0	1/1:3,31:34:84.26:1015,84,0	1/1:0,22:22:66.20:797,66,0	1/1:5,33:38:93.24:1107,93,0	1/1:2,29:31:78.24:942,78,0	1/1:0,5:6:17.92:196,18,0	1/1:1,13:14:30.09:362,30,0	1/1:1,23:25:72.07:835,72,0	1/1:4,37:41:99:1269,105,0	1/1:2,11:13:30.09:362,30,0	1/1:0,26:26:72.14:834,72,0	1/1:6,25:31:60:725,60,0	1/1:3,11:14:27.08:326,27,0	1/1:1,19:20:51.16:616,51,0	1/1:4,32:36:96.26:1135,96,0	1/1:4,14:18:39.12:471,39,0	1/1:2,7:9:18.06:217,18,0
chr10	9084861	.	ACTCTCTCTCTCT	A	539.32	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=1.247;DP=613;FS=10.392;HRun=0;HaplotypeScore=220.3718;InbreedingCoeff=0.7379;MQ=66.30;MQ0=12;MQRankSum=-4.281;QD=24.51;ReadPosRankSum=-0.745;VQSLOD=1.2573;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:12.76:0,13,583	0/0:13,0:13:17.50:0,18,415	0/0:37,0:17:12.04:0,12,477	0/0:65,0:30:41.46:0,41,1612	0/0:24,0:23:12:0,12,354	0/0:26,0:26:23.56:0,24,735	0/0:21,0:21:3.85:0,4,160	0/0:46,0:44:52.98:0,53,2075	1/1:3,6:10:16.61:529,17,0	0/0:24,0:25:54.19:0,54,2621	0/0:26,0:26:45.14:0,45,1938	0/0:27,0:26:24.28:0,24,971	0/0:17,0:17:24.03:0,24,481	0/0:23,0:23:14.60:0,15,609	0/0:10,0:11:30.10:0,30,1491	0/0:17,0:17:21.95:0,22,839	0/0:8,0:8:5.81:0,6,165	0/0:12,0:12:24.08:0,24,938	0/0:18,0:18:27.08:0,27,1029	0/0:26,0:26:24.02:0,24,688	1/1:6,5:12:8.95:121,9,0	0/0:21,0:21:15.92:0,16,478	0/0:9,0:10:11.40:0,11,537	0/0:5,0:5:0:0,0,0	0/0:37,0:37:33.15:0,33,1196	0/0:18,0:17:51.15:0,51,2013	0/0:26,0:27:38.38:0,38,1352	0/0:6,0:6:15.05:0,15,683
chr10	9084896	.	C	CTCTCTCTCTA	5916.39	PASS	AB=0.921;AC=43;AF=0.796;AN=54;BaseQRankSum=-4.161;DP=447;FS=2.092;HRun=0;HaplotypeScore=165.4330;InbreedingCoeff=0.5038;MQ=51.56;MQ0=32;MQRankSum=-4.878;QD=16.76;ReadPosRankSum=-1.244;VQSLOD=3.6490;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:16,1:14:5.62:108,6,0	1/1:6,1:8:9.18:277,9,0	0/0:33,0:4:11.21:0,11,90	0/1:35,0:9:8.15:8,0,148	1/1:19,0:19:0.47:1,0,0	1/1:14,0:16:14.53:261,15,0	1/1:17,1:19:3.62:105,4,0	1/1:19,0:19:50.23:697,50,0	0/0:11,0:11:16.54:0,17,376	0/1:21,0:21:42.39:42,0,630	0/0:18,0:17:21.05:0,21,385	1/1:17,0:19:18.72:470,19,0	1/1:4,3:11:9.92:394,10,0	1/1:18,2:20:13.76:383,14,0	0/0:15,0:15:23.77:0,24,464	1/1:11,0:14:22.76:633,23,0	1/1:3,0:3:8.75:69,9,0	0/1:4,0:4:6.14:254,0,6	1/1:6,0:5:3.72:188,4,0	1/1:20,0:20:13.39:289,13,0	./.	1/1:10,0:10:6.12:158,6,0	1/1:14,0:13:8.04:72,8,0	1/1:2,3:6:0.23:0,0,0	1/1:16,3:20:14.83:472,15,0	1/1:19,0:17:47.73:461,48,0	1/1:20,0:21:6.35:482,6,0	1/1:5,0:5:14.70:91,15,0
chr10	9084935	.	TGTGTGTGTGTGC	T	2456.44	PASS	AB=0.966;AC=27;AF=0.500;AN=54;BaseQRankSum=2.699;DP=472;FS=9.050;HRun=0;HaplotypeScore=144.3456;InbreedingCoeff=0.2124;MQ=55.07;MQ0=38;MQRankSum=0.454;QD=9.10;ReadPosRankSum=4.810;VQSLOD=1.7625;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:22:3.01:0,3,33	1/1:6,0:6:11.96:124,12,0	0/0:42,0:13:38.32:0,38,291	0/0:42,0:16:39.77:0,40,350	0/0:14,0:14:0.47:0,0,1	0/1:16,0:16:5.65:6,0,102	0/0:25,0:25:6.70:0,7,73	0/1:22,0:21:99:191,0,367	0/0:10,0:10:21.30:0,21,342	0/1:12,0:12:77.47:77,0,302	0/0:14,0:14:6:0,6,65	0/1:21,1:21:6.67:376,0,7	1/1:11,1:10:20.85:260,21,0	1/1:19,0:19:17.59:289,18,0	0/1:21,0:21:5.50:6,0,141	0/1:18,0:18:17.07:42,0,17	1/1:8,0:8:6.02:167,6,0	0/1:6,0:5:29.97:30,0,114	1/1:10,0:10:23.76:233,24,0	1/1:17,0:17:17.84:163,18,0	0/1:26,0:24:1.21:1,0,145	1/1:5,1:6:2.79:19,3,0	0/0:14,1:14:0.94:0,1,2	1/1:17,0:17:2.99:24,3,0	0/0:16,0:15:4.42:0,4,50	0/1:9,5:12:44.74:317,0,45	1/1:15,3:18:11.85:300,12,0	./.
chr10	9084937	.	TGTGTGTGTGC	T	3037.04	PASS	AB=0.958;AC=30;AF=0.577;AN=52;BaseQRankSum=3.659;DP=449;FS=7.946;HRun=0;HaplotypeScore=125.4148;InbreedingCoeff=0.2847;MQ=57.12;MQ0=33;MQRankSum=-0.349;QD=12.05;ReadPosRankSum=5.172;VQSLOD=1.6292;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:22:2.22:0,2,7	1/1:4,2:6:11.96:157,12,0	0/0:43,0:16:46.55:0,47,366	0/0:40,0:16:32.13:0,32,334	0/1:14,0:14:0.03:0,0,0	0/1:16,1:17:34.38:36,0,34	0/0:25,0:25:5.45:0,5,29	0/1:20,0:19:99:267,0,167	0/0:10,0:10:21.30:0,21,306	0/1:9,1:10:98.95:137,0,99	0/1:12,0:12:0:0,0,0	1/1:4,18:21:5.06:403,5,0	1/1:8,1:8:20.78:207,21,0	1/1:2,18:20:17.80:353,18,0	0/1:18,1:19:25.82:26,0,60	1/1:17,0:17:14.02:172,14,0	1/1:0,7:7:6.02:201,6,0	0/1:6,0:5:39.37:53,0,39	1/1:1,8:9:23.81:267,24,0	1/1:3,13:16:17.86:198,18,0	0/0:27,0:25:1.79:0,2,170	1/1:4,0:4:2.96:19,3,0	./.	1/1:17,0:17:2.99:24,3,0	0/0:15,0:14:3.92:0,4,24	0/1:10,2:10:6.39:352,0,6	1/1:4,11:15:11.78:328,12,0	./.
chr10	9084939	.	TGTGTGTGC	T	3041.18	PASS	AB=0.985;AC=39;AF=0.750;AN=52;BaseQRankSum=4.832;DP=434;FS=16.334;HRun=0;HaplotypeScore=114.8621;InbreedingCoeff=0.4906;MQ=58.87;MQ0=32;MQRankSum=-2.107;QD=10.17;ReadPosRankSum=5.760;VQSLOD=0.7549;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:21:3.01:38,3,0	1/1:5,0:5:11.96:124,12,0	0/0:44,0:17:48.90:0,49,397	0/0:41,0:17:30.36:0,30,360	0/1:12,0:12:0.02:0,0,0	1/1:17,0:17:11.76:106,12,0	0/1:25,0:25:1.79:33,0,2	0/1:21,0:20:45.54:353,0,46	0/0:9,0:9:21.30:0,21,274	1/1:9,0:9:17.90:237,18,0	0/1:11,1:12:0:0,0,0	1/1:21,0:20:20.87:306,21,0	1/1:9,0:8:23.78:217,24,0	1/1:18,0:18:17.86:236,18,0	1/1:18,0:18:8.84:55,9,0	1/1:14,3:17:14.98:333,15,0	1/1:7,0:7:6.02:139,6,0	1/1:5,0:5:11.91:87,12,0	1/1:9,0:9:23.84:234,24,0	1/1:15,0:15:17.72:126,18,0	0/0:28,0:26:4.88:0,5,195	1/1:2,0:2:2.96:19,3,0	./.	1/1:15,0:15:2.99:24,3,0	1/1:13,1:13:2.58:17,3,0	0/1:11,0:9:3.80:272,0,4	1/1:14,0:14:11.92:237,12,0	./.
chr10	9084941	.	TGTGTGC	T	2916.30	PASS	AB=0.699;AC=41;AF=0.788;AN=52;BaseQRankSum=5.238;DP=426;FS=11.838;HRun=0;HaplotypeScore=106.0237;InbreedingCoeff=0.6011;MQ=61.89;MQ0=30;MQRankSum=-2.795;QD=10.13;ReadPosRankSum=5.613;VQSLOD=1.1072;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:1,18:18:2.94:18,3,0	1/1:5,0:5:11.96:110,12,0	0/0:45,0:18:51.20:0,51,416	0/0:43,0:19:36.07:0,36,428	0/1:1,9:10:0.13:0,0,0	1/1:6,11:17:11.49:147,11,0	1/1:3,20:23:4.46:24,4,0	0/1:20,0:19:1.39:383,0,1	0/0:9,0:9:20.82:0,21,242	1/1:7,1:8:21.04:273,21,0	0/1:3,9:12:0:0,0,0	1/1:21,0:20:20.87:253,21,0	1/1:8,0:8:23.78:203,24,0	1/1:18,0:18:17.82:194,18,0	1/1:2,15:17:8.96:94,9,0	1/1:4,12:16:15.05:293,15,0	1/1:7,0:7:6.02:110,6,0	1/1:5,0:5:14.88:107,15,0	1/1:9,0:9:23.87:221,24,0	1/1:15,0:15:17.70:113,18,0	0/0:28,0:26:5.01:0,5,195	1/1:3,0:3:5.95:44,6,0	./.	1/1:17,0:17:2.99:24,3,0	1/1:2,12:13:2.48:37,2,0	1/1:10,0:8:5.71:236,6,0	1/1:14,0:14:11.92:183,12,0	./.
chr10	9084945	.	TGC	T	2148.88	PASS	AB=1.000;AC=41;AF=0.820;AN=50;BaseQRankSum=5.602;DP=412;FS=8.419;HRun=0;HaplotypeScore=89.4118;InbreedingCoeff=0.7119;MQ=65.88;MQ0=27;MQRankSum=-4.586;QD=8.23;ReadPosRankSum=5.195;VQSLOD=2.4917;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:18:2.94:18,3,0	1/1:5,0:5:11.90:87,12,0	0/0:48,0:21:59.17:0,59,487	0/0:44,0:20:47.71:0,48,452	0/1:9,0:9:0.02:0,0,0	1/1:12,0:12:11.83:80,12,0	1/1:22,0:22:5.88:36,6,0	1/1:11,9:19:50.84:445,51,0	0/0:6,0:7:17.60:0,18,147	1/1:7,0:7:21.02:197,21,0	./.	1/1:20,0:19:20.78:152,21,0	1/1:8,0:8:23.76:175,24,0	1/1:18,0:18:17.73:121,18,0	1/1:17,0:17:8.83:54,9,0	1/1:15,0:15:14.95:123,15,0	1/1:7,0:7:6:54,6,0	1/1:5,0:5:14.88:107,15,0	1/1:9,0:9:23.90:193,24,0	1/1:14,0:14:17.65:108,18,0	0/0:29,0:28:11:0,11,245	1/1:3,0:3:5.95:44,6,0	./.	1/1:0,17:17:2.99:24,3,0	1/1:14,0:13:2.83:18,3,0	1/1:7,0:7:20.95:170,21,0	1/1:14,0:14:11.83:98,12,0	./.
chr10	9085589	.	GAT	G	983.16	PASS	AB=0.793;AC=19;AF=0.452;AN=42;BaseQRankSum=-3.067;DP=195;FS=0.000;HRun=0;HaplotypeScore=40.0498;InbreedingCoeff=0.4629;MQ=61.28;MQ0=2;MQRankSum=-0.866;QD=10.92;ReadPosRankSum=0.738;VQSLOD=3.0819;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,8:13:23.91:285,24,0	0/0:4,0:4:6.02:0,6,93	0/0:13,0:9:0:0,0,0	0/0:17,1:9:1.24:0,1,3	1/1:7,2:9:6.02:71,6,0	1/1:2,3:5:6.02:71,6,0	1/1:2,3:5:6.01:63,6,0	0/1:17,6:23:41.62:218,0,42	0/0:4,0:4:3.01:0,3,34	./.	./.	./.	1/1:3,1:4:3.01:36,3,0	0/0:2,0:2:3.01:0,3,48	0/0:4,0:4:3:0,3,25	1/1:5,1:6:3.01:36,3,0	0/0:6,0:13:29.50:0,30,243	1/1:5,8:13:14.60:239,15,0	1/1:4,0:4:3.01:34,3,0	./.	0/0:6,0:6:6.02:0,6,69	0/0:3,0:3:3.01:0,3,48	./.	./.	1/1:5,3:8:6.02:71,6,0	0/0:5,0:5:3.01:0,3,48	./.	0/0:10,1:11:12.04:0,12,190
chr10	9085633	.	C	CAT	2159.14	PASS	AB=0.993;AC=38;AF=0.864;AN=44;BaseQRankSum=-3.588;DP=225;FS=0.000;HRun=0;HaplotypeScore=48.1215;InbreedingCoeff=0.2354;MQ=66.13;MQ0=14;MQRankSum=-0.112;QD=11.25;ReadPosRankSum=0.131;VQSLOD=2.6994;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,4:10:11.53:170,12,0	1/1:2,0:4:3:27,3,0	0/0:24,0:5:2.30:0,2,7	0/1:69,0:20:11.55:12,0,30	1/1:2,3:7:3.01:50,3,0	0/0:5,0:5:11.93:0,12,128	1/1:1,1:2:3.01:41,3,0	1/1:12,26:38:75.25:1199,75,0	./.	0/1:1,0:1:0:0,0,0	./.	1/1:2,0:2:1.55:4,2,0	1/1:0,0:3:2.39:25,2,0	1/1:0,0:3:3:26,3,0	./.	1/1:0,4:4:6.02:99,6,0	1/1:4,0:14:7.20:56,7,0	1/1:3,5:8:12.04:197,12,0	1/1:1,0:1:3:25,3,0	1/1:1,0:1:3:27,3,0	./.	./.	./.	1/1:1,0:1:3:27,3,0	1/1:3,4:7:3.01:50,3,0	1/1:1,0:4:9:80,9,0	1/1:0,0:4:3:27,3,0	1/1:2,1:6:12.01:129,12,0
chr10	9086065	.	A	AT	14996.60	PASS	AB=0.526;AC=41;AF=0.732;AN=56;BaseQRankSum=-14.489;DP=563;FS=6.886;HRun=5;HaplotypeScore=44.9843;InbreedingCoeff=0.9296;MQ=77.07;MQ0=0;MQRankSum=-2.215;QD=34.55;ReadPosRankSum=0.239;VQSLOD=4.8531;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,14:15:42.11:535,42,0	1/1:1,9:10:27.09:355,27,0	0/0:17,0:17:45.10:0,45,471	0/0:6,0:6:18.05:0,18,193	1/1:2,21:23:63.12:790,63,0	1/1:4,25:29:69.22:907,69,0	1/1:2,11:13:33.11:434,33,0	1/1:4,28:32:84.26:1088,84,0	0/0:24,0:24:60.15:0,60,645	0/0:28,0:28:75.18:0,75,801	0/0:17,0:17:48.12:0,48,515	1/1:0,15:15:42.14:553,42,0	1/1:1,21:22:60.20:790,60,0	1/1:2,21:23:57.19:750,57,0	0/0:26,0:26:69.16:0,69,734	1/1:0,18:18:45.15:592,45,0	1/1:0,7:7:18.06:237,18,0	1/1:1,14:15:42.14:553,42,0	1/1:1,16:17:48.11:587,48,0	1/1:1,38:39:99:1498,114,0	0/0:11,0:11:33.08:0,33,355	1/1:0,20:20:60.07:731,60,0	1/1:1,18:18:54.18:711,54,0	1/1:1,15:16:33.11:434,33,0	1/1:2,26:28:72.23:948,72,0	0/1:2,18:20:4.30:650,0,4	1/1:1,33:34:84.27:1105,84,0	1/1:0,19:19:57.19:750,57,0
chr10	9086573	.	A	AGT	689.46	PASS	AB=0.883;AC=7;AF=0.130;AN=54;BaseQRankSum=-2.891;DP=385;FS=0.916;HRun=0;HaplotypeScore=52.9593;InbreedingCoeff=0.3910;MQ=55.23;MQ0=17;MQRankSum=1.282;QD=11.49;ReadPosRankSum=-0.563;VQSLOD=3.1029;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:24:8.81:0,9,163	0/0:4,0:4:6.02:0,6,67	0/0:11,0:3:3.01:0,3,32	./.	0/0:19,0:21:36.10:0,36,399	0/0:14,0:14:21.04:0,21,224	0/0:11,0:12:23.89:0,24,241	0/0:23,0:23:12:0,12,117	0/0:1,0:3:5.68:0,6,28	0/1:9,7:16:9.20:293,0,9	1/1:2,9:11:21.07:317,21,0	0/0:6,0:6:18.04:0,18,191	0/0:11,0:11:15.04:0,15,166	0/0:3,0:4:8.86:0,9,80	1/1:1,6:5:12.04:181,12,0	0/0:6,0:8:17.71:0,18,161	0/0:24,0:24:38.77:0,39,423	0/0:29,0:31:43.67:0,44,462	0/0:20,0:18:9.06:0,9,128	0/0:10,0:10:21.05:0,21,225	0/0:16,0:15:18.03:0,18,185	0/1:6,0:6:12.89:13,0,88	0/0:7,0:7:11.87:0,12,114	0/0:5,0:5:9.02:0,9,100	0/0:15,0:15:32.55:0,33,323	0/1:19,1:19:21.22:21,0,202	0/0:21,0:21:45.10:0,45,486	0/0:12,0:15:26.42:0,26,240
chr10	9088833	.	GA	G	2175.99	PASS	AB=0.955;AC=12;AF=0.214;AN=56;BaseQRankSum=12.137;DP=604;FS=5.384;HRun=11;HaplotypeScore=70.9417;InbreedingCoeff=0.8494;MQ=71.80;MQ0=0;MQRankSum=-1.846;QD=15.77;ReadPosRankSum=2.051;VQSLOD=4.5490;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:72.01:0,72,750	0/0:11,0:11:24.06:0,24,256	0/0:13,0:13:25.51:0,26,191	0/1:14,0:14:1.45:1,0,149	0/0:30,2:33:22.68:0,23,606	0/0:24,3:27:10.85:0,11,520	0/0:20,1:21:32.47:0,32,531	0/0:35,1:36:65.57:0,66,890	1/1:5,17:22:53.92:443,54,0	1/1:4,19:24:58.91:466,59,0	1/1:1,27:28:68.87:566,69,0	0/0:22,0:23:47.25:0,47,518	0/0:14,0:16:29.04:0,29,313	0/0:15,0:16:35.91:0,36,359	1/1:1,19:20:53.94:443,54,0	0/0:19,0:19:57.12:0,57,595	0/0:18,1:19:26.45:0,26,470	0/1:9,1:10:0.58:1,0,200	0/0:16,0:16:14.50:0,14,353	0/0:27,0:28:62.25:0,62,660	1/1:3,17:20:53.53:429,54,0	0/0:21,1:22:15.43:0,15,442	0/0:27,1:28:41.45:0,41,616	0/0:15,0:15:33.08:0,33,352	0/0:18,0:18:46.33:0,46,472	0/0:27,1:28:38.50:0,38,602	0/0:24,2:27:9.99:0,10,530	0/0:16,1:18:29.39:0,29,502
chr10	9088987	.	GT	G	10091.05	PASS	AB=0.659;AC=50;AF=0.893;AN=56;BaseQRankSum=-2.787;DP=631;FS=1.834;HRun=11;HaplotypeScore=66.0859;InbreedingCoeff=0.3483;MQ=74.51;MQ0=0;MQRankSum=-4.492;QD=16.28;ReadPosRankSum=3.625;VQSLOD=5.7528;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,41:46:98.86:813,99,0	1/1:1,10:11:23.96:197,24,0	0/1:16,1:17:1.21:1,0,173	0/0:11,0:10:7.13:0,7,74	1/1:8,27:35:70.65:571,71,0	1/1:4,19:23:47.75:383,48,0	1/1:3,13:16:29.96:246,30,0	1/1:7,29:36:79.66:640,80,0	1/1:2,26:28:68.91:566,69,0	1/1:4,24:28:68.80:558,69,0	1/1:1,15:17:37.77:290,38,0	1/1:5,15:20:38.93:320,39,0	1/1:0,17:17:44.95:369,45,0	1/1:2,19:21:47.92:394,48,0	1/1:2,24:26:59.91:493,60,0	1/1:1,17:18:38.95:320,39,0	1/1:3,29:32:77.90:640,78,0	1/1:2,12:14:9.31:201,9,0	1/1:1,14:15:41.79:334,42,0	1/1:3,24:28:64.76:507,65,0	1/1:8,15:23:32.95:271,33,0	1/1:5,19:24:3.13:237,3,0	0/1:6,13:19:30.12:207,0,30	0/1:6,20:26:0.92:353,0,1	0/1:5,16:22:4.43:254,0,4	1/1:4,20:25:55.75:438,56,0	1/1:3,17:21:11.98:290,12,0	1/1:3,8:11:23.94:197,24,0
chr10	9091486	.	ACCATTT	A	1801.07	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.032;DP=665;FS=11.158;HRun=0;HaplotypeScore=134.6946;InbreedingCoeff=0.9700;MQ=90.12;MQ0=0;MQRankSum=-8.757;QD=40.93;ReadPosRankSum=-0.167;VQSLOD=3.1495;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,138,4767	0/0:11,0:11:30.10:0,30,1081	0/0:26,0:26:78.25:0,78,2506	0/0:34,0:34:96.29:0,96,2960	0/0:22,0:22:66.23:0,66,2379	0/0:15,0:15:45.15:0,45,1611	0/0:18,0:18:54.19:0,54,1869	0/0:32,0:32:93.32:0,93,3152	1/1:3,19:22:34.19:1205,34,0	0/0:25,0:25:72.25:0,72,2556	0/0:18,0:18:54.19:0,54,1818	0/0:15,0:15:45.15:0,45,1613	0/0:22,0:22:66.23:0,66,2235	0/0:32,0:32:93.32:0,93,3123	0/0:21,0:21:63.22:0,63,2236	0/0:31,0:31:87.30:0,87,3089	0/0:21,0:21:63.22:0,63,2228	0/0:11,0:11:33.11:0,33,1088	0/0:22,0:22:66.19:0,66,2113	0/0:30,0:30:84.29:0,84,3028	1/1:6,16:22:29.14:717,29,0	0/0:22,0:22:63.22:0,63,2184	0/0:27,0:27:81.28:0,81,2918	0/0:25,0:25:75.24:0,75,2476	0/0:24,0:24:72.25:0,72,2537	0/0:26,0:26:78.27:0,78,2812	0/0:37,0:37:99:0,108,3887	0/0:3,0:3:9.03:0,9,325
chr10	9092079	.	C	CAT	587.39	PASS	AB=0.974;AC=8;AF=0.143;AN=56;BaseQRankSum=8.147;DP=661;FS=9.306;HRun=0;HaplotypeScore=129.0347;InbreedingCoeff=0.1124;MQ=49.68;MQ0=29;MQRankSum=1.470;QD=3.67;ReadPosRankSum=-3.672;VQSLOD=1.0784;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:21:38.05:0,38,458	0/0:10,0:9:8.42:0,8,259	0/0:20,0:9:23.97:0,24,249	0/0:22,0:12:20.23:0,20,321	0/0:23,0:23:57.01:0,57,703	0/0:23,0:23:26.96:0,27,276	0/0:19,0:18:26.82:0,27,262	0/0:34,0:27:77.45:0,77,791	1/1:11,9:15:18.89:270,19,0	0/1:26,0:23:24.02:24,0,458	0/0:27,0:24:14.04:0,14,413	0/0:28,0:27:19.34:0,19,191	0/1:22,0:21:33.31:33,0,245	0/0:21,0:21:20.60:0,21,296	0/0:37,0:34:7.47:0,7,794	0/1:19,0:19:27.88:28,0,127	0/0:17,0:17:25.84:0,26,317	0/0:24,0:23:58.17:0,58,596	0/0:17,0:12:9.32:0,9,233	0/0:25,0:24:6.89:0,7,425	0/1:27,6:27:21.48:306,0,21	0/0:38,0:36:36.69:0,37,609	0/1:24,0:23:1.10:1,0,228	0/0:26,0:26:38.13:0,38,545	0/0:23,0:23:17.93:0,18,224	0/0:32,0:30:40.82:0,41,908	0/0:11,0:11:23.51:0,24,208	0/1:16,0:16:59.27:59,0,339
chr10	9092091	.	CACAT	C	911.18	PASS	AB=1.000;AC=22;AF=0.393;AN=56;BaseQRankSum=7.290;DP=644;FS=1.453;HRun=0;HaplotypeScore=145.0211;InbreedingCoeff=-0.3524;MQ=49.27;MQ0=26;MQRankSum=0.878;QD=1.90;ReadPosRankSum=-1.692;VQSLOD=2.4750;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:22:39.95:40,0,133	0/1:11,0:10:11.48:11,0,147	0/0:4,0:2:2.97:0,3,20	0/0:11,0:4:8.99:0,9,82	0/1:20,0:20:51.57:52,0,189	0/1:29,0:29:16.27:16,0,82	0/1:19,0:18:77.81:98,0,78	0/1:36,0:26:20.09:20,0,210	1/1:14,5:14:12.09:65,12,0	0/1:29,0:25:0.45:0,0,329	0/1:25,0:22:59.69:60,0,140	0/0:23,0:22:0.83:0,1,32	0/1:23,0:22:0.29:0,0,115	0/1:20,0:20:11.14:11,0,71	0/1:38,0:35:14.28:14,0,258	0/1:21,0:21:33.44:79,0,33	0/0:16,0:15:7.94:0,8,126	0/1:24,0:23:48.55:49,0,207	0/0:21,0:15:5.84:0,6,155	0/0:26,0:26:22.25:0,22,296	1/1:27,3:25:25.50:245,25,0	0/0:36,0:34:24.32:0,24,287	0/1:23,0:22:40.56:41,0,47	0/0:26,0:26:26.91:0,27,249	0/1:29,0:29:9.37:9,0,39	0/1:31,0:29:99:133,0,417	0/1:11,0:11:55.09:55,0,110	0/1:17,0:17:70.15:70,0,187
chr10	9092093	.	CAT	C	2047.66	PASS	AB=0.896;AC=24;AF=0.429;AN=56;BaseQRankSum=6.782;DP=637;FS=4.452;HRun=0;HaplotypeScore=128.5385;InbreedingCoeff=-0.4358;MQ=49.59;MQ0=25;MQRankSum=0.816;QD=4.06;ReadPosRankSum=2.564;VQSLOD=2.7841;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:20:27.01:27,0,136	0/1:10,0:9:11.15:70,0,11	0/0:2,0:1:2.97:0,3,20	0/0:12,0:4:11.99:0,12,107	0/1:20,0:20:12.54:13,0,170	0/0:29,0:29:19.53:0,20,131	0/1:18,0:17:60.17:60,0,94	0/1:35,0:25:4.87:5,0,225	1/1:18,0:13:12.73:84,13,0	0/1:30,0:26:99:140,0,118	0/1:24,1:22:56.61:107,0,57	0/1:22,1:22:20.63:21,0,29	0/1:10,13:22:85.30:149,0,85	0/1:4,16:20:63.10:92,0,63	0/1:36,0:33:37.14:146,0,37	0/1:21,1:22:17.86:18,0,39	0/1:15,1:15:21.01:21,0,127	0/1:23,2:24:0.92:1,0,235	0/1:18,1:13:16.56:154,0,17	0/1:19,8:27:93.89:128,0,94	1/1:29,2:26:28.74:247,29,0	0/0:35,1:34:17.93:0,18,220	0/1:9,14:22:40.96:60,0,41	0/0:25,0:25:26.37:0,26,189	0/0:29,0:29:14.39:0,14,91	0/1:27,5:30:89.54:348,0,90	0/1:11,0:11:35.31:91,0,35	0/1:12,5:17:53.90:230,0,54
chr10	9092095	.	TAC	T	1859.64	PASS	AB=0.988;AC=33;AF=0.611;AN=54;BaseQRankSum=-4.604;DP=641;FS=6.613;HRun=0;HaplotypeScore=131.2582;InbreedingCoeff=-0.1994;MQ=49.39;MQ0=27;MQRankSum=-0.178;QD=3.26;ReadPosRankSum=1.251;VQSLOD=2.3185;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:20:2.07:10,2,0	1/1:11,0:10:20.92:125,21,0	./.	0/0:15,0:4:3.01:0,3,47	1/1:19,0:19:12.15:64,12,0	0/1:27,0:28:14.61:22,0,15	0/1:18,0:17:9.43:39,0,9	0/0:35,0:25:0.80:0,1,42	0/0:18,0:14:5.03:0,5,30	0/1:29,2:27:49.01:177,0,49	0/1:24,1:22:25.04:64,0,25	0/1:24,0:23:0.67:1,0,11	0/1:24,0:23:5.47:67,0,5	0/1:20,0:20:0.44:39,0,0	0/1:36,0:33:3.64:261,0,4	1/1:22,0:22:13.01:55,13,0	0/1:16,1:16:15.41:15,0,31	0/1:25,0:24:26.75:27,0,40	1/1:19,1:12:22.75:233,23,0	1/1:26,1:27:0.96:137,1,0	1/1:31,0:26:7.05:42,7,0	0/1:35,0:33:32.44:32,0,45	1/1:21,1:21:7.71:57,8,0	0/1:24,0:24:6.43:7,0,6	1/1:28,0:28:7.93:33,8,0	0/1:32,1:31:10.61:380,0,11	0/1:11,0:11:11.29:44,0,11	0/1:17,0:17:24.12:77,0,24
chr10	9092101	.	C	CAT	453.02	PASS	AB=0.917;AC=8;AF=0.143;AN=56;BaseQRankSum=6.480;DP=646;FS=2.626;HRun=0;HaplotypeScore=146.6658;InbreedingCoeff=-0.1908;MQ=50.54;MQ0=25;MQRankSum=0.846;QD=2.14;ReadPosRankSum=1.894;VQSLOD=2.7076;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:18:28.95:0,29,225	0/0:11,0:10:14.96:0,15,134	0/0:5,0:2:3:0,3,26	0/0:14,0:2:6.02:0,6,76	0/0:18,0:18:38.89:0,39,345	0/1:28,0:28:10.78:11,0,54	0/0:19,0:18:28.58:0,29,202	0/0:38,0:28:12.43:0,12,314	0/0:18,0:14:0.73:0,1,21	0/1:19,12:28:99:316,0,187	0/1:21,3:21:43.46:43,0,91	0/0:22,0:21:4.43:0,4,19	0/0:23,0:22:7.58:0,8,112	0/0:18,0:18:15.76:0,16,77	0/1:22,9:31:99:177,0,233	0/0:26,0:26:17.53:0,18,137	0/0:15,0:14:13.77:0,14,97	0/0:27,0:27:51.68:0,52,394	0/1:22,0:15:5.95:6,0,80	0/0:28,0:28:1.96:0,2,124	0/0:33,0:28:29.60:0,30,244	0/1:33,0:31:5:5,0,134	0/1:21,0:20:1.82:2,0,39	0/0:24,0:24:14.04:0,14,157	0/0:28,0:28:11.92:0,12,126	0/0:36,0:34:32.19:0,32,388	0/0:10,0:10:23.12:0,23,141	0/1:18,0:18:12.27:12,0,193
chr10	9092105	.	C	CACACAT	4273.64	PASS	AB=0.873;AC=26;AF=0.464;AN=56;BaseQRankSum=-2.441;DP=664;FS=2.128;HRun=0;HaplotypeScore=167.6086;InbreedingCoeff=0.2937;MQ=50.74;MQ0=23;MQRankSum=0.886;QD=9.73;ReadPosRankSum=2.404;VQSLOD=4.1492;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:17:20.47:0,20,160	1/1:10,2:11:12.55:302,13,0	0/0:8,0:4:8.20:0,8,56	0/0:18,0:5:11.86:0,12,128	0/0:18,0:18:41.50:0,41,436	0/0:28,0:28:14.88:0,15,191	0/0:20,0:19:13.96:0,14,155	0/0:36,0:26:61.22:0,61,451	0/1:19,0:15:1.74:8,0,2	0/1:31,0:27:16.03:339,0,16	0/1:25,0:22:78.46:78,0,100	0/1:4,19:26:8.15:46,0,8	1/1:20,1:20:4.98:328,5,0	1/1:18,1:19:17.63:170,18,0	0/1:35,0:32:0.20:250,0,0	0/0:27,0:27:14.66:0,15,175	0/1:7,10:18:13.10:28,0,13	0/1:26,0:26:5.39:5,0,342	1/1:14,8:17:4.34:409,4,0	1/1:27,0:27:35.92:544,36,0	0/1:33,0:28:8.23:67,0,8	0/1:13,18:31:13.86:14,0,30	1/1:21,0:20:14.13:225,14,0	0/0:5,17:23:5.17:0,5,19	0/0:26,0:27:8.82:0,9,134	1/1:38,0:36:12:705,12,0	1/1:11,0:11:10.51:178,11,0	0/1:18,1:19:44.38:576,0,44
chr10	9092107	.	C	CAT	259.75	PASS	AB=0.951;AC=10;AF=0.179;AN=56;BaseQRankSum=6.359;DP=661;FS=0.000;HRun=0;HaplotypeScore=151.9075;InbreedingCoeff=-0.0437;MQ=50.40;MQ0=23;MQRankSum=1.201;QD=1.20;ReadPosRankSum=1.235;VQSLOD=2.2253;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:17:26.76:0,27,212	0/0:12,0:11:12.71:0,13,116	0/0:12,0:5:8.97:0,9,75	0/0:17,0:5:11.84:0,12,103	0/0:17,0:18:41.88:0,42,371	0/0:27,0:29:15.03:0,15,165	0/0:19,0:18:23.53:0,24,172	0/0:35,0:28:72.43:0,72,529	0/1:11,9:16:11.38:82,0,11	0/1:29,0:25:61.19:61,0,162	0/0:25,0:22:29.44:0,29,224	0/0:25,0:24:7.20:0,7,42	0/0:23,0:22:18.19:0,18,129	0/0:19,0:19:17.15:0,17,131	0/0:35,0:32:11.62:0,12,241	0/0:27,0:27:17.71:0,18,180	0/1:19,0:18:9.79:10,0,18	0/0:25,0:25:47.32:0,47,436	0/1:21,0:16:2.78:3,0,156	0/1:27,0:28:1.02:1,0,149	1/1:31,0:26:1.36:154,1,0	0/1:28,0:26:16.10:16,0,73	0/1:20,0:19:21.94:22,0,39	0/0:23,0:23:5.06:0,5,80	0/0:27,0:27:8.92:0,9,102	0/0:37,0:36:16.74:0,17,575	0/0:13,0:13:21.30:0,21,129	0/1:19,0:19:40.15:40,0,134
chr10	9092109	.	CACAT	C	5192.40	PASS	AB=1.000;AC=41;AF=0.732;AN=56;BaseQRankSum=-7.195;DP=658;FS=4.415;HRun=0;HaplotypeScore=140.5447;InbreedingCoeff=-0.2284;MQ=50.26;MQ0=23;MQRankSum=1.709;QD=8.09;ReadPosRankSum=-1.450;VQSLOD=3.8917;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:16:26.97:255,27,0	0/1:12,0:11:22.66:134,0,23	0/0:16,0:5:7.56:0,8,106	0/1:20,0:7:40.59:41,0,89	1/1:18,0:18:41.84:438,42,0	1/1:7,22:29:13.74:192,14,0	1/1:13,5:17:21.04:282,21,0	1/1:38,2:31:80.40:664,80,0	0/1:19,0:15:15.89:34,0,16	0/1:28,0:24:65.55:203,0,66	1/1:23,0:20:3.35:141,3,0	0/1:26,0:25:3.74:37,0,4	1/1:22,0:21:1.59:72,2,0	1/1:19,0:19:9.91:55,10,0	1/1:34,0:31:40.07:248,40,0	1/1:1,25:26:14.17:279,14,0	0/1:18,0:17:12.48:27,0,12	1/1:22,2:25:21.98:540,22,0	0/1:22,0:16:46.26:136,0,46	0/1:29,0:29:71.70:116,0,72	1/1:33,0:29:31.70:223,32,0	0/1:28,0:26:80.31:80,0,91	1/1:19,0:18:14.57:110,15,0	0/1:21,0:21:16.33:16,0,20	1/1:1,27:28:8.82:170,9,0	0/1:38,0:36:61.88:427,0,62	0/1:15,0:15:33.28:135,0,33	0/1:13,0:13:60.29:135,0,60
chr10	9092111	.	CAT	C	5501.07	PASS	AB=1.000;AC=49;AF=0.875;AN=56;BaseQRankSum=-4.678;DP=651;FS=9.460;HRun=0;HaplotypeScore=127.1024;InbreedingCoeff=0.0968;MQ=50.34;MQ0=22;MQRankSum=1.164;QD=8.66;ReadPosRankSum=1.118;VQSLOD=4.2508;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:16:26.92:212,27,0	1/1:11,0:10:22.27:196,22,0	0/0:16,0:5:6.44:0,6,116	0/1:23,0:9:37.60:38,0,92	1/1:17,1:18:43.31:345,43,0	1/1:29,0:29:2.87:62,3,0	1/1:17,1:17:23.91:216,24,0	1/1:39,0:30:78.21:586,78,0	1/1:19,0:15:9.72:67,10,0	1/1:31,0:27:35.72:322,36,0	1/1:22,0:19:20.48:182,20,0	0/1:25,0:24:3.96:58,0,4	1/1:22,0:21:26.74:260,27,0	1/1:19,0:19:17.05:169,17,0	1/1:32,0:29:39.18:218,39,0	1/1:26,0:26:14.32:119,14,0	0/1:17,0:16:5.34:53,0,5	1/1:25,0:25:34.06:354,34,0	1/1:18,0:12:0.59:173,1,0	1/1:29,0:29:20.88:274,21,0	1/1:34,0:31:38.81:277,39,0	0/1:27,0:25:48.38:84,0,48	1/1:18,1:18:14.57:124,15,0	0/1:19,0:19:14.15:17,0,14	1/1:28,0:28:8.86:70,9,0	1/1:36,2:36:49.51:575,50,0	1/1:15,0:15:6.75:159,7,0	1/1:13,0:13:18.66:291,19,0
chr10	9093224	.	A	ATCTT	1891.40	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-7.420;DP=643;FS=0.000;HRun=0;HaplotypeScore=98.8053;InbreedingCoeff=0.9960;MQ=81.33;MQ0=1;MQRankSum=-2.348;QD=54.04;ReadPosRankSum=3.551;VQSLOD=4.5668;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:60.18:0,60,1037	0/0:23,0:23:69.21:0,69,1164	0/0:18,0:18:45.08:0,45,662	0/0:15,0:15:40.41:0,40,585	0/0:24,0:24:63.17:0,63,1023	0/0:25,0:25:69.18:0,69,1103	0/0:13,0:13:30.07:0,30,470	0/0:31,0:31:66.21:0,66,1116	1/1:2,21:22:57.20:1470,57,0	0/0:28,0:28:78.26:0,78,1363	0/0:24,0:24:72.23:0,72,1252	0/0:26,0:26:75.26:0,75,1334	0/0:27,0:27:81.22:0,81,1314	0/0:28,0:28:81.26:0,81,1407	0/0:33,0:33:99:0,99,1704	0/0:28,0:28:69.24:0,69,1227	0/0:19,0:19:48.12:0,48,824	0/0:12,0:12:30.10:0,30,510	0/0:21,0:21:42.07:0,42,658	0/0:37,0:37:99:0,105,1805	1/1:2,9:12:21.07:542,21,0	0/0:20,0:20:54.15:0,54,903	0/0:25,0:25:75.23:0,75,1277	0/0:9,0:9:24.08:0,24,427	0/0:27,0:27:69.24:0,69,1222	0/0:29,0:29:81.27:0,81,1406	0/0:34,0:34:96.30:0,96,1625	0/0:12,0:12:30.10:0,30,533
chr10	9094989	.	A	ATG	21863.91	PASS	AB=0.564;AC=47;AF=0.839;AN=56;BaseQRankSum=-7.197;DP=780;FS=0.814;HRun=0;HaplotypeScore=147.7994;InbreedingCoeff=0.8427;MQ=58.82;MQ0=7;MQRankSum=-5.164;QD=34.49;ReadPosRankSum=2.224;VQSLOD=6.8145;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,26:33:60.20:982,60,0	1/1:3,10:13:24.08:400,24,0	0/0:33,0:23:57.15:0,57,701	0/0:35,0:34:66.20:0,66,822	1/1:4,18:21:39.13:633,39,0	1/1:6,26:32:69.24:1142,69,0	1/1:5,17:22:39.13:651,39,0	1/1:8,36:45:99:1769,111,0	0/0:25,0:25:60.17:0,60,742	1/1:6,22:29:75.26:1224,75,0	1/1:7,19:26:60.20:980,60,0	1/1:10,28:38:93.31:1523,93,0	1/1:8,29:37:75.25:1228,75,0	1/1:6,29:34:72.25:1186,72,0	1/1:7,39:46:93.32:1543,93,0	1/1:3,29:32:69.24:1150,69,0	1/1:10,9:19:27.09:447,27,0	1/1:2,12:14:29.18:546,29,0	1/1:6,14:20:45.15:732,45,0	1/1:3,20:23:48.16:794,48,0	0/0:50,0:50:99:0,129,1613	1/1:6,15:20:39.13:648,39,0	1/1:6,9:15:27.09:450,27,0	1/1:2,31:33:68.77:1147,69,0	1/1:1,12:13:24.08:402,24,0	1/1:8,28:36:90.31:1487,90,0	0/1:5,17:22:25.19:702,0,25	1/1:3,4:7:6.02:100,6,0
chr10	9095041	.	ATGTGTGTGTGTG	A	4655.01	PASS	AB=0.819;AC=29;AF=0.537;AN=54;BaseQRankSum=-1.205;DP=593;FS=4.117;HRun=0;HaplotypeScore=273.9383;InbreedingCoeff=0.1327;MQ=46.03;MQ0=26;MQRankSum=1.027;QD=11.88;ReadPosRankSum=7.233;VQSLOD=2.6596;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:19:0.34:0,0,1	0/0:5,1:7:0:0,0,0	0/0:48,0:18:15.05:0,15,365	0/0:52,0:23:6.02:0,6,141	0/0:12,0:18:0.47:0,0,1	0/1:20,0:23:30.52:86,0,31	1/1:12,0:15:2.18:85,2,0	0/0:28,0:27:19.96:0,20,212	0/0:16,0:18:7.74:0,8,125	1/1:8,8:17:26.95:769,27,0	1/1:11,4:14:2.78:25,3,0	0/1:25,7:33:4.15:450,0,4	0/1:18,4:26:92.83:595,0,93	0/1:21,5:30:40.99:458,0,41	0/1:22,3:29:49.47:97,0,49	1/1:9,0:14:12.04:360,12,0	1/1:6,1:8:6.02:203,6,0	0/1:12,0:13:49.53:110,0,50	0/1:17,1:17:2.95:170,0,3	1/1:14,5:20:5.78:125,6,0	1/1:25,0:24:10.53:59,11,0	0/1:8,4:13:0:0,0,0	1/1:8,1:10:2.99:24,3,0	1/1:24,1:26:2.51:24,3,0	0/0:3,0:7:2.75:0,3,29	1/1:21,6:27:32.73:812,33,0	0/1:14,2:17:50.44:202,0,50	./.
chr10	9095061	.	G	GCA	749.82	PASS	AB=0.926;AC=10;AF=0.179;AN=56;BaseQRankSum=-2.109;DP=492;FS=4.033;HRun=0;HaplotypeScore=229.8490;InbreedingCoeff=0.3543;MQ=33.95;MQ0=22;MQRankSum=-5.679;QD=9.87;ReadPosRankSum=-0.027;VQSLOD=3.3926;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:14,3:17:5.64:0,6,34	0/1:7,0:7:0:0,0,0	0/0:20,0:7:21.07:0,21,304	0/0:24,0:3:9.03:0,9,131	0/0:17,2:19:2.84:0,3,31	0/1:7,5:12:2.01:22,0,2	1/1:15,0:14:2.93:58,3,0	1/1:14,5:18:4.77:688,5,0	0/0:20,0:20:23.78:0,24,353	0/0:22,0:22:56.66:0,57,532	0/0:14,0:12:9.03:0,9,132	0/0:30,0:28:35.91:0,36,385	0/0:28,0:28:62.60:0,63,633	0/0:32,0:31:21.34:0,21,221	0/0:31,0:31:28.49:0,28,310	0/1:8,0:8:12.95:13,0,33	0/0:8,0:8:11.81:0,12,119	0/1:6,0:6:39.69:84,0,40	0/0:18,0:16:35.97:0,36,393	0/0:23,0:23:8.99:0,9,109	0/0:20,0:18:23.99:0,24,320	0/0:15,0:14:2.74:0,3,14	0/0:7,0:7:8.78:0,9,75	0/0:23,0:20:2.84:0,3,42	1/1:6,3:9:2.74:12,3,0	0/0:26,0:24:71.59:0,72,717	0/0:16,0:15:20.70:0,21,222	0/0:2,0:1:2.74:0,3,12
chr10	9095903	.	TTCTCTCTCTCTCTCTC	T	1106.25	PASS	AB=0.856;AC=14;AF=0.259;AN=54;BaseQRankSum=-0.524;DP=554;FS=9.004;HRun=0;HaplotypeScore=227.1686;InbreedingCoeff=0.4930;MQ=70.32;MQ0=22;MQRankSum=-1.971;QD=6.25;ReadPosRankSum=1.294;VQSLOD=1.6021;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:16,0:15:4.64:26,0,5	0/0:9,0:9:9.57:0,10,126	0/0:24,0:16:0:0,0,0	./.	1/1:13,3:17:8.97:160,9,0	1/1:8,4:10:12.03:138,12,0	1/1:17,1:18:12.01:221,12,0	0/0:29,0:27:2.50:0,2,9	0/1:18,0:23:70.47:104,0,70	0/0:19,0:19:9.02:0,9,150	0/1:16,0:18:32.56:33,0,90	0/0:21,0:19:15.04:0,15,398	0/0:22,0:21:27.09:0,27,743	0/0:22,0:21:24.08:0,24,643	0/1:14,0:19:7.64:8,0,138	1/1:19,6:25:21.44:443,21,0	0/0:19,0:13:9.01:0,9,165	0/0:10,0:9:6.02:0,6,171	0/0:20,0:18:22.50:0,23,659	0/0:16,0:16:12.04:0,12,281	0/0:14,0:10:3.01:0,3,40	0/0:25,0:25:33.11:0,33,861	0/0:20,0:20:9.50:0,10,231	0/0:12,0:11:9.03:0,9,236	1/1:23,2:25:11.96:142,12,0	0/0:23,0:23:27.45:0,27,831	0/0:26,0:25:24.08:0,24,551	0/0:13,0:12:10.85:0,11,161
chr10	9095959	.	T	TTG	456.48	PASS	AB=1.000;AC=19;AF=0.365;AN=52;BaseQRankSum=-5.014;DP=566;FS=2.737;HRun=0;HaplotypeScore=164.0331;InbreedingCoeff=0.2285;MQ=37.94;MQ0=40;MQRankSum=3.160;QD=1.47;ReadPosRankSum=0.064;VQSLOD=2.6818;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:2.76:0,3,13	0/0:12,0:11:3.68:0,4,15	./.	0/0:20,0:1:2.99:0,3,24	0/1:35,0:35:0:0,0,0	0/0:23,0:20:0.47:0,0,1	0/1:25,0:23:0:0,0,0	1/1:17,0:15:2.94:18,3,0	0/0:23,0:23:8.09:0,8,36	1/1:5,15:20:7.88:397,8,0	1/1:10,9:17:2.93:36,3,0	0/1:36,0:32:7.71:13,0,8	0/0:29,0:28:18.83:0,19,86	0/0:19,0:17:2.24:0,2,13	0/0:9,9:17:2.42:0,2,33	0/1:25,0:24:5.86:6,0,28	0/0:11,0:5:5.60:0,6,26	1/1:6,0:5:2.98:21,3,0	0/1:16,0:14:6.82:15,0,7	0/0:24,0:24:2.80:0,3,14	0/1:15,0:11:0:0,0,0	0/1:35,0:35:0:1,0,0	./.	0/1:12,0:12:0:0,0,0	1/1:24,0:23:1.25:3,1,0	0/1:22,0:20:43.63:67,0,44	0/0:23,0:21:7.82:0,8,38	0/0:9,0:4:5.60:0,6,26
chr10	9095969	.	GTGTGTGTGTGTGTA	G	1779.49	PASS	AB=0.996;AC=26;AF=0.464;AN=56;BaseQRankSum=5.242;DP=623;FS=28.620;HRun=0;HaplotypeScore=213.7095;InbreedingCoeff=0.2152;MQ=40.27;MQ0=37;MQRankSum=-2.969;QD=5.01;ReadPosRankSum=2.358;VQSLOD=1.2878;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:17,0:17:13.82:14,0,14	1/1:12,0:12:15.20:83,15,0	0/0:23,0:3:9.03:0,9,302	0/0:31,0:3:8.45:0,8,105	0/0:36,0:36:23.92:0,24,149	0/0:25,0:24:6.84:0,7,48	0/0:23,0:21:9.10:0,9,52	0/1:15,0:14:15.09:15,0,174	1/1:7,17:24:27.05:609,27,0	0/0:27,0:25:35.28:0,35,2769	0/0:22,0:21:16.34:0,16,778	0/1:36,0:34:23.14:33,0,23	1/1:29,0:29:26.86:262,27,0	0/1:19,0:17:4.05:22,0,4	0/0:21,0:20:11.14:0,11,343	0/1:25,1:25:22.45:90,0,22	1/1:11,0:8:6.02:107,6,0	0/1:9,0:8:4.97:5,0,307	0/1:17,0:15:14.63:154,0,15	1/1:28,0:28:9.16:85,9,0	1/1:14,0:12:2.51:16,3,0	0/0:35,0:35:3.64:0,4,20	0/1:23,0:23:9.85:10,0,10	1/1:15,0:15:1.87:5,2,0	0/0:25,0:24:14.64:0,15,86	0/1:25,0:23:99:254,0,340	1/1:23,0:21:9.11:98,9,0	0/1:12,0:7:3.31:95,0,3
chr10	9095973	.	GTGTGTGTGTA	G	3111.29	PASS	AB=0.974;AC=41;AF=0.732;AN=56;BaseQRankSum=6.956;DP=633;FS=17.911;HRun=0;HaplotypeScore=188.9707;InbreedingCoeff=0.5326;MQ=41.02;MQ0=35;MQRankSum=-6.230;QD=6.62;ReadPosRankSum=-0.693;VQSLOD=1.2087;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:16,1:17:6.62:77,7,0	1/1:12,0:12:20.79:155,21,0	0/0:25,0:3:9.03:0,9,196	0/0:34,0:4:4.62:0,5,74	0/0:33,2:35:2.27:0,2,17	1/1:23,0:22:0.39:2,0,0	1/1:25,0:23:2.60:19,3,0	1/1:19,0:18:13.97:214,14,0	1/1:24,0:24:26.71:345,27,0	0/0:28,0:26:38.29:0,38,2021	0/0:21,0:20:16.30:0,16,527	1/1:33,0:31:18.33:122,18,0	1/1:29,0:29:47.56:486,48,0	1/1:20,0:18:11.29:74,11,0	0/0:19,0:18:7.60:0,8,219	1/1:24,1:25:17.21:224,17,0	1/1:4,6:9:6.02:143,6,0	0/1:9,0:8:9.50:9,0,136	1/1:20,0:18:43.28:332,43,0	1/1:29,0:29:28.49:149,28,0	1/1:16,0:14:8.94:65,9,0	1/1:37,0:37:18.46:62,18,0	1/1:24,0:24:18.58:64,19,0	1/1:15,0:15:2.76:16,3,0	1/1:25,0:24:1.36:4,1,0	0/1:24,0:22:99:405,0,177	1/1:22,0:21:16.39:179,16,0	0/1:11,1:7:1.99:133,0,2
chr10	9095975	.	GTGTGTGTA	G	6412.32	PASS	AB=0.844;AC=44;AF=0.786;AN=56;BaseQRankSum=6.007;DP=633;FS=12.007;HRun=0;HaplotypeScore=168.5967;InbreedingCoeff=0.4649;MQ=41.50;MQ0=31;MQRankSum=-6.128;QD=12.33;ReadPosRankSum=-0.298;VQSLOD=3.1761;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:2,15:17:9.78:135,10,0	1/1:8,4:12:22.70:275,23,0	0/0:28,0:4:11.68:0,12,128	0/0:36,0:5:0.57:0,1,28	1/1:12,23:35:23.35:241,23,0	1/1:5,18:22:9.90:96,10,0	1/1:4,19:23:11.84:116,12,0	1/1:18,0:17:41.27:304,41,0	1/1:23,0:23:26.66:290,27,0	0/0:28,0:26:38.28:0,38,1642	0/0:21,0:20:16.64:0,17,406	1/1:7,26:31:38.61:496,39,0	1/1:5,24:29:50.75:883,51,0	1/1:6,14:18:14.98:208,15,0	0/1:20,0:19:10.32:10,0,182	1/1:9,16:25:23.56:398,24,0	1/1:9,1:9:6.02:142,6,0	0/1:9,0:8:69.18:69,0,91	1/1:3,16:18:47.12:409,47,0	1/1:3,27:30:35.38:428,35,0	1/1:16,0:14:9.27:65,9,0	1/1:6,30:36:30.41:304,30,0	1/1:2,22:24:26.92:297,27,0	1/1:1,14:15:2.76:16,3,0	1/1:4,20:23:15.02:164,15,0	0/1:8,18:24:99:592,0,124	1/1:5,17:21:17.99:338,18,0	0/1:8,3:7:2.62:133,0,3
chr10	9099040	.	TCTCTCTCTCTCA	T	210.54	PASS	AB=1.000;AC=15;AF=0.313;AN=48;BaseQRankSum=5.505;DP=440;FS=11.856;HRun=0;HaplotypeScore=134.3500;InbreedingCoeff=-0.1085;MQ=36.27;MQ0=67;MQRankSum=-2.168;QD=1.07;ReadPosRankSum=-0.666;VQSLOD=1.7499;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:23:7.87:0,8,201	0/1:12,0:11:16.73:17,0,42	./.	./.	0/1:17,0:16:12.82:13,0,127	0/1:13,0:8:29.91:30,0,42	0/0:21,0:16:14.74:0,15,361	0/0:13,0:10:1.34:0,1,81	1/1:24,0:21:0.89:2,1,0	0/1:17,0:15:18.04:18,0,281	1/1:8,0:6:3.01:44,3,0	0/0:18,0:17:15.19:0,15,320	0/0:15,0:13:8.87:0,9,284	0/0:25,0:24:12.04:0,12,273	0/0:22,0:20:9.91:0,10,174	0/1:14,0:13:7.04:7,0,290	0/1:25,0:19:43.58:44,0,414	0/0:17,0:15:34.12:0,34,649	0/0:6,0:5:15.01:0,15,219	0/0:11,0:11:1.72:0,2,5	1/1:10,6:10:0.47:1,0,0	0/1:21,0:20:16.04:16,0,31	./.	0/0:26,0:23:17.42:0,17,183	0/0:11,0:9:5.97:0,6,90	0/1:19,0:17:99:132,0,166	0/1:10,0:9:17.59:18,0,117	./.
chr10	9099050	.	TCACACACACACACACACACACACACACATACA	T	2726.77	PASS	AB=0.931;AC=23;AF=0.676;AN=34;BaseQRankSum=0.776;DP=398;FS=37.223;HRun=0;HaplotypeScore=178.8314;InbreedingCoeff=0.1081;MQ=37.30;MQ0=58;MQRankSum=-2.816;QD=12.23;ReadPosRankSum=-0.776;VQSLOD=1.4063;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:22:9.87:52,0,10	1/1:5,0:12:3.15:239,3,0	./.	./.	1/1:9,0:13:1.25:3,1,0	0/0:12,0:7:0:0,0,0	./.	1/1:14,0:10:11.32:65,11,0	1/1:25,0:21:1.25:3,1,0	1/1:8,6:13:9.20:553,9,0	./.	0/1:9,10:18:3.28:208,0,3	1/1:13,0:10:5.98:179,6,0	./.	./.	1/1:7,0:11:2.47:243,2,0	0/1:25,0:20:3.17:63,0,3	0/1:17,0:15:13.03:82,0,13	0/1:4,0:4:0:0,0,0	./.	./.	0/0:7,11:17:0.88:0,1,2	./.	0/0:22,0:19:0.30:0,0,5	./.	1/1:7,10:15:25.76:817,26,0	1/1:8,1:8:11.63:314,12,0	./.
chr10	9099051	.	CACACACACACACACACACACACACACAT	C	1894.81	PASS	AB=1.000;AC=29;AF=0.853;AN=34;BaseQRankSum=0.581;DP=399;FS=13.735;HRun=0;HaplotypeScore=168.6203;InbreedingCoeff=0.0796;MQ=37.18;MQ0=58;MQRankSum=-1.915;QD=7.26;ReadPosRankSum=0.630;VQSLOD=2.2572;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:22:5.38:22,5,0	1/1:13,0:12:3.95:204,4,0	./.	./.	1/1:14,0:13:1.25:3,1,0	0/0:13,0:8:2.49:0,2,9	1/1:18,0:12:2.99:24,3,0	0/1:15,0:11:23.04:25,0,23	1/1:25,0:21:1.55:4,2,0	1/1:15,0:13:12.75:442,13,0	./.	1/1:19,0:18:2.04:174,2,0	1/1:12,0:10:8.42:76,8,0	./.	./.	1/1:12,0:11:1.73:196,2,0	1/1:25,0:20:0.13:25,0,0	0/1:15,0:13:8.21:33,0,8	1/1:4,0:4:2.92:17,3,0	./.	./.	./.	./.	0/1:22,0:19:0.23:0,0,1	./.	1/1:17,0:15:23.47:519,23,0	1/1:9,0:8:7.49:225,7,0	./.
chr10	9099077	.	CATACACACACACACACACACACACACACACAG	C	2966.18	PASS	AB=0.959;AC=24;AF=0.750;AN=32;BaseQRankSum=-1.334;DP=282;FS=1.680;HRun=0;HaplotypeScore=108.8196;InbreedingCoeff=0.0795;MQ=34.19;MQ0=60;MQRankSum=1.592;QD=18.54;ReadPosRankSum=0.280;VQSLOD=2.2431;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:16:10.11:91,10,0	1/1:10,0:9:3.48:222,3,0	./.	./.	1/1:10,0:7:1.25:3,1,0	0/0:8,0:5:0.89:0,1,2	0/0:10,0:5:2.94:0,3,18	0/1:9,0:7:61.75:69,0,62	./.	1/1:11,0:7:8.93:493,9,0	./.	0/1:12,0:11:9.23:199,0,9	1/1:8,0:6:11.57:150,12,0	./.	./.	1/1:9,0:8:8.49:250,8,0	1/1:16,0:12:17.44:192,17,0	1/1:11,0:7:14.03:106,14,0	0/1:4,0:2:10.48:15,0,10	./.	./.	./.	./.	1/1:13,0:10:8.02:107,8,0	./.	0/1:12,0:12:27.29:651,0,27	1/1:11,0:10:19.76:527,20,0	./.
chr10	9100264	.	G	GA	7579.15	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-11.799;DP=589;FS=2.352;HRun=7;HaplotypeScore=90.6360;InbreedingCoeff=0.9648;MQ=71.03;MQ0=2;MQRankSum=-0.024;QD=28.60;ReadPosRankSum=0.649;VQSLOD=5.0735;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,29:30:72.22:870,72,0	0/0:15,0:15:36.05:0,36,347	0/0:30,2:18:7.92:0,8,217	0/0:25,0:19:3.06:0,3,215	1/1:0,26:26:78.16:908,78,0	1/1:1,14:15:36.11:435,36,0	1/1:5,19:24:39.12:467,39,0	1/1:4,26:29:75.22:892,75,0	1/1:2,13:15:36.11:435,36,0	1/1:7,17:24:51.09:584,51,0	1/1:1,22:23:66.14:779,66,0	0/0:19,0:19:54.06:0,54,514	0/0:17,0:17:48.08:0,48,463	0/0:20,0:20:51.04:0,51,476	1/1:2,18:20:45.14:544,45,0	1/1:1,18:19:54.17:652,54,0	0/0:28,0:28:75.10:0,75,717	1/1:3,13:16:36.11:435,36,0	0/0:21,0:21:47.63:0,48,429	0/0:26,0:26:72.05:0,72,679	1/1:1,7:8:18.06:217,18,0	0/0:17,0:17:45:0,45,414	0/0:19,0:19:57.08:0,57,545	0/0:10,0:10:24:0,24,220	1/1:2,13:15:30.09:362,30,0	0/0:27,1:28:44.88:0,45,713	0/0:24,0:24:72.10:0,72,689	0/0:23,0:23:66.11:0,66,637
chr10	9102101	.	TG	T	27452.74	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-7.118;DP=756;FS=0.000;HRun=1;HaplotypeScore=79.3225;InbreedingCoeff=0.9918;MQ=73.24;MQ0=0;MQRankSum=-7.439;QD=38.29;ReadPosRankSum=4.904;VQSLOD=5.1921;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,49:49:99:1886,135,0	1/1:0,13:13:36.12:503,36,0	0/0:15,0:15:43.03:0,43,655	0/0:23,1:21:44.60:0,45,599	1/1:0,39:39:99:1571,114,0	1/1:0,24:24:69.23:965,69,0	1/1:0,26:26:69.23:965,69,0	1/1:0,41:41:99:1643,120,0	1/1:0,23:23:63.21:881,63,0	1/1:0,33:33:99:1382,99,0	1/1:1,19:20:57.13:765,57,0	1/1:0,30:30:84.28:1175,84,0	1/1:0,43:43:99:1550,111,0	1/1:0,26:26:69.23:964,69,0	1/1:0,53:53:99:2056,147,0	1/1:0,33:33:90.30:1259,90,0	1/1:0,20:20:48.16:671,48,0	1/1:0,15:15:42.14:587,42,0	1/1:1,22:23:69.16:940,69,0	1/1:0,28:28:81.19:1090,81,0	1/1:0,30:30:78.26:1091,78,0	1/1:1,29:30:77.98:1062,78,0	1/1:0,16:16:45.15:629,45,0	1/1:0,20:20:54.18:755,54,0	1/1:0,28:28:75.25:1049,75,0	1/1:0,23:23:69.23:964,69,0	1/1:0,22:22:60.20:839,60,0	1/1:0,9:9:15.05:210,15,0
chr10	9102797	.	C	CTGTGTGTGTG	8882.37	PASS	AB=0.859;AC=44;AF=0.815;AN=54;BaseQRankSum=-3.776;DP=763;FS=2.169;HRun=0;HaplotypeScore=248.8006;InbreedingCoeff=0.4601;MQ=63.44;MQ0=9;MQRankSum=-1.421;QD=14.98;ReadPosRankSum=-0.195;VQSLOD=3.8302;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:41,0:41:18.15:200,18,0	1/1:10,0:10:15:233,15,0	0/0:55,0:33:6.42:0,6,153	0/0:35,0:21:0.69:0,1,33	./.	1/1:24,0:24:11.93:159,12,0	1/1:30,0:30:30.28:427,30,0	1/1:47,0:47:62.75:826,63,0	0/1:12,0:23:89.24:89,0,446	1/1:19,0:20:34.26:854,34,0	1/1:18,0:20:12.03:196,12,0	1/1:12,14:28:6.02:280,6,0	1/1:18,3:31:24.76:596,25,0	1/1:15,10:29:9.24:430,9,0	1/1:28,0:28:17.50:242,17,0	1/1:30,1:32:26.13:625,26,0	1/1:8,10:21:18.04:672,18,0	1/1:11,0:11:17.93:454,18,0	1/1:29,0:29:36.12:811,36,0	1/1:15,8:23:0.94:2,1,0	1/1:25,0:39:3.01:33,3,0	0/0:16,7:25:0.29:0,0,1	0/0:19,14:35:0.86:0,1,2	1/1:16,4:21:8.51:261,9,0	0/1:14,0:22:0:0,0,0	1/1:14,7:24:37.64:1023,38,0	1/1:14,10:27:6.02:280,6,0	1/1:3,3:8:7.57:189,8,0
chr10	9102842	.	TG	T	593.91	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.620;DP=664;FS=0.935;HRun=1;HaplotypeScore=138.3015;InbreedingCoeff=0.8718;MQ=56.75;MQ0=6;MQRankSum=-1.583;QD=31.26;ReadPosRankSum=1.813;VQSLOD=3.4691;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:21.38:0,21,325	0/0:14,0:14:30.10:0,30,479	0/0:35,0:21:53.99:0,54,813	0/0:32,0:14:30.06:0,30,402	0/0:18,0:18:30.10:0,30,469	0/0:27,0:27:51.09:0,51,778	0/0:24,0:24:44.98:0,45,720	0/0:46,0:46:99:0,132,2078	1/1:1,18:19:51.14:689,51,0	0/0:34,0:34:96.27:0,96,1449	0/0:17,0:16:30.08:0,30,455	0/0:34,0:34:87.29:0,87,1361	0/0:31,0:31:75.23:0,75,1137	0/0:23,0:23:41.89:0,42,671	0/0:29,0:29:48.16:0,48,757	0/0:31,0:31:60.14:0,60,941	0/0:16,0:16:38.97:0,39,622	0/0:8,0:8:21.07:0,21,335	0/0:19,0:18:51.10:0,51,745	0/0:20,0:20:32.59:0,33,479	0/0:39,0:38:37.92:0,38,546	0/0:22,0:21:36.34:0,36,566	0/0:26,0:26:41.93:0,42,661	0/0:11,0:11:6.02:0,6,96	0/0:27,0:26:48.14:0,48,733	0/0:23,0:23:66.23:0,66,1055	0/0:14,0:14:33.09:0,33,493	0/0:5,0:5:11.97:0,12,162
chr10	9103583	.	G	GA	5346.21	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-14.597;DP=717;FS=9.162;HRun=9;HaplotypeScore=69.7197;InbreedingCoeff=0.9741;MQ=78.88;MQ0=0;MQRankSum=0.093;QD=23.87;ReadPosRankSum=-2.332;VQSLOD=4.5576;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,23:28:74.99:797,75,0	0/0:10,0:10:17.98:0,18,156	0/0:20,0:21:25.92:0,26,197	0/0:16,0:16:28.08:0,28,220	1/1:3,20:23:36.60:568,37,0	1/1:7,24:32:60:645,60,0	1/1:8,19:27:5.04:512,5,0	1/1:6,36:42:99:1143,105,0	0/0:26,0:26:62.98:0,63,547	0/0:31,0:31:89.97:0,90,779	0/0:18,0:18:50.73:0,51,428	0/0:33,0:33:89.81:0,90,763	0/0:19,1:20:23.81:0,24,436	0/0:39,0:39:99:0,105,896	0/0:30,0:31:79.98:0,80,683	1/1:4,30:34:81.22:896,81,0	0/0:26,0:26:65.96:0,66,569	1/1:5,5:10:15.04:166,15,0	0/0:25,0:25:59.98:0,60,521	0/0:22,0:23:61.99:0,62,520	0/0:30,0:30:77.92:0,78,665	0/0:26,0:26:59.93:0,60,514	0/0:19,0:19:53.96:0,54,465	0/0:16,0:16:47.99:0,48,416	1/1:5,22:28:36.95:619,37,0	0/0:39,0:39:99:0,102,883	0/0:28,0:28:77.97:0,78,677	0/0:16,0:16:44.98:0,45,391
chr10	9104343	.	AGTGTGTGTGTGTGTGTGT	A	4982.74	PASS	AB=0.819;AC=30;AF=0.600;AN=50;BaseQRankSum=7.463;DP=573;FS=31.542;HRun=0;HaplotypeScore=253.2314;InbreedingCoeff=0.4490;MQ=59.05;MQ0=15;MQRankSum=-5.410;QD=14.00;ReadPosRankSum=-2.455;VQSLOD=2.0735;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:33:30.48:30,0,207	1/1:6,0:7:6.02:270,6,0	./.	./.	0/0:22,0:26:8.63:0,9,180	0/1:19,0:28:1.55:2,0,168	0/0:13,0:20:2.48:0,2,182	0/0:22,0:21:12.92:0,13,211	1/1:9,0:17:6.02:246,6,0	0/0:23,0:23:24.07:0,24,747	0/0:17,0:18:15.05:0,15,582	1/1:22,5:26:12.04:560,12,0	1/1:9,6:16:15.05:711,15,0	1/1:13,9:22:11.89:511,12,0	0/0:14,0:25:21.07:0,21,510	0/0:16,0:17:17.98:0,18,200	1/1:23,3:26:2.33:144,2,0	0/1:15,0:19:79.85:80,0,236	1/1:15,0:16:3.01:126,3,0	1/1:14,9:22:14.91:572,15,0	1/1:22,0:20:5.99:72,6,0	./.	1/1:18,5:23:3.01:145,3,0	1/1:23,0:22:2.17:85,2,0	0/0:17,0:24:3.40:0,3,366	0/1:20,1:21:99:164,0,100	1/1:14,10:24:15.05:725,15,0	1/1:3,2:7:12.04:541,12,0
chr10	9106731	.	C	CTATA	2508.10	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-8.154;DP=732;FS=1.412;HRun=0;HaplotypeScore=115.4465;InbreedingCoeff=0.9998;MQ=89.28;MQ0=0;MQRankSum=-0.990;QD=62.70;ReadPosRankSum=1.328;VQSLOD=5.6077;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:90.31:0,90,1679	0/0:17,0:17:51.16:0,51,914	0/0:26,0:26:66.17:0,66,1115	0/0:28,0:28:75.09:0,75,1272	0/0:29,0:29:78.27:0,78,1444	0/0:28,0:28:81.26:0,81,1481	0/0:22,0:22:60.19:0,60,1081	0/0:28,0:28:78.27:0,78,1448	1/1:2,17:20:51.18:1350,51,0	0/0:29,0:29:84.29:0,84,1568	0/0:28,0:28:81.28:0,81,1488	0/0:34,0:34:87.30:0,87,1597	0/0:36,0:36:99:0,99,1847	0/0:20,0:20:54.17:0,54,963	0/0:36,0:36:99:0,105,1921	0/0:30,0:30:81.28:0,81,1512	0/0:21,0:21:57.17:0,57,1031	0/0:12,0:12:33.06:0,33,540	0/0:17,0:17:45.15:0,45,840	0/0:33,0:33:96.30:0,96,1729	1/1:2,18:20:48.16:1279,48,0	0/0:30,0:30:81.28:0,81,1504	0/0:31,0:31:84.27:0,84,1530	0/0:25,0:25:75.26:0,75,1364	0/0:21,0:21:57.19:0,57,1046	0/0:31,0:31:87.30:0,87,1623	0/0:34,0:34:99:0,99,1835	0/0:15,0:15:45.15:0,45,825
chr10	9107144	.	TGACA	T	8717.98	PASS	AB=0.523;AC=15;AF=0.268;AN=56;BaseQRankSum=8.369;DP=607;FS=0.701;HRun=0;HaplotypeScore=121.3718;InbreedingCoeff=0.9099;MQ=87.28;MQ0=0;MQRankSum=-7.757;QD=46.62;ReadPosRankSum=0.250;VQSLOD=4.9960;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,13:13:33.07:580,33,0	0/0:10,0:10:30.10:0,30,769	0/0:29,0:29:78.24:0,78,1883	0/0:17,0:17:45.15:0,45,1081	1/1:1,30:31:84.24:1531,84,0	1/1:3,34:37:90.31:1678,90,0	1/1:2,16:18:45.15:839,45,0	1/1:2,29:31:84.27:1525,84,0	0/0:17,0:17:45.15:0,45,1189	0/0:29,0:29:81.28:0,81,2142	0/0:19,0:19:48.16:0,48,1246	0/0:12,0:12:36.12:0,36,915	0/0:32,0:32:93.32:0,93,2427	0/0:22,0:22:66.23:0,66,1733	0/0:29,0:29:81.26:0,81,2104	0/1:2,21:23:16.93:1054,0,17	0/0:30,0:30:87.30:0,87,2310	1/1:1,11:12:27.09:504,27,0	0/0:25,0:25:72.25:0,72,1901	0/0:27,0:27:78.27:0,78,2051	0/0:9,0:9:27.09:0,27,706	0/0:19,0:19:51.17:0,51,1285	0/0:16,0:16:39.13:0,39,1025	0/0:9,0:9:24.08:0,24,630	1/1:0,22:22:54.19:1007,54,0	0/0:24,0:24:69.23:0,69,1788	0/0:32,0:32:93.32:0,93,2432	0/0:13,0:13:36.12:0,36,960
chr10	9108086	.	TAGTC	T	9894.90	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=16.249;DP=737;FS=3.660;HRun=0;HaplotypeScore=122.3554;InbreedingCoeff=0.9994;MQ=89.87;MQ0=2;MQRankSum=-8.034;QD=48.74;ReadPosRankSum=-0.566;VQSLOD=5.6433;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,31:34:81.28:1549,81,0	0/0:12,0:12:33.11:0,33,879	0/0:35,0:35:78.84:0,79,2149	0/0:25,0:25:72.25:0,72,1866	1/1:1,27:28:75.21:1382,75,0	1/1:2,21:22:63.22:1221,63,0	1/1:0,19:19:48.16:926,48,0	1/1:6,32:38:96.30:1793,96,0	0/0:24,0:24:72.25:0,72,1968	0/0:35,0:35:99:0,102,2693	0/0:27,0:27:81.28:0,81,2157	0/0:27,0:27:81.28:0,81,2218	0/0:21,0:21:63.22:0,63,1699	0/0:30,0:30:90.31:0,90,2451	0/0:35,0:35:99:0,105,2814	1/1:2,21:23:48.16:930,48,0	0/0:31,0:31:93.32:0,93,2547	1/1:0,9:9:27.09:523,27,0	0/0:17,0:17:51.18:0,51,1381	0/0:30,0:30:84.29:0,84,2232	0/0:41,0:41:99:0,123,3363	0/0:33,0:33:99:0,99,2683	0/0:25,0:25:72.25:0,72,1966	0/0:30,0:30:84.29:0,84,2264	1/1:1,27:28:81.28:1570,81,0	0/0:27,0:26:81.28:0,81,2187	0/0:20,0:20:60.19:0,60,1553	0/0:9,0:9:24.08:0,24,631
chr10	9109566	.	CAG	C	16862	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=16.472;DP=717;FS=0.000;HRun=0;HaplotypeScore=85.1709;InbreedingCoeff=0.9830;MQ=75.10;MQ0=5;MQRankSum=-2.278;QD=37.22;ReadPosRankSum=3.105;VQSLOD=6.5201;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,102,1822	1/1:0,2:2:6.02:86,6,0	0/0:20,0:20:51.15:0,51,822	0/0:8,0:8:21.07:0,21,354	0/0:28,0:28:84.29:0,84,1515	0/0:23,0:23:69.24:0,69,1265	0/0:17,0:17:48.16:0,48,873	0/0:38,0:38:99:0,108,1946	1/1:0,23:23:57.19:814,57,0	1/1:4,30:34:90.30:1287,90,0	1/1:1,22:23:63.21:902,63,0	1/1:0,33:33:93.31:1332,93,0	1/1:1,29:29:75.25:1074,75,0	1/1:0,23:23:63.21:902,63,0	1/1:0,40:40:99:1461,102,0	0/0:29,0:29:38.31:0,38,1381	1/1:2,24:25:57.19:811,57,0	0/0:7,0:7:18.06:0,18,328	1/1:0,20:20:60.17:816,60,0	1/1:2,41:43:99:1564,111,0	0/0:40,0:40:99:0,111,1997	1/1:1,26:27:75.25:1067,75,0	1/1:1,26:27:72.24:1025,72,0	1/1:0,24:23:63.21:902,63,0	0/0:20,0:20:57.20:0,57,1039	1/1:2,32:33:93.30:1315,93,0	1/1:3,31:34:81.27:1160,81,0	1/1:1,9:9:24.08:343,24,0
chr10	9111126	.	CCTGTAT	C	1096.59	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.741;DP=727;FS=0.849;HRun=0;HaplotypeScore=148.5471;InbreedingCoeff=0.9956;MQ=77.57;MQ0=0;MQRankSum=-7.552;QD=30.46;ReadPosRankSum=-3.800;VQSLOD=2.7978;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,105,3665	0/0:12,0:12:33.11:0,33,1190	0/0:20,0:20:60.21:0,60,1989	0/0:14,0:14:36.12:0,36,1263	0/0:22,0:22:57.20:0,57,1902	0/0:27,0:27:72.25:0,72,2473	0/0:23,0:23:66.23:0,66,2331	0/0:37,0:37:99:0,99,3432	0/0:30,0:30:84.27:0,84,2870	0/0:35,0:35:99:0,99,3304	0/0:20,0:20:60.21:0,60,2007	0/0:37,0:37:99:0,111,3834	0/0:31,0:31:90.31:0,90,3172	0/0:33,0:33:96.33:0,96,3342	0/0:29,0:29:87.28:0,87,2906	0/0:31,0:31:93.32:0,93,3277	0/0:18,0:18:54.19:0,54,1902	0/0:16,0:16:42.14:0,42,1471	0/0:29,0:29:84.29:0,84,2856	0/0:25,0:25:72.25:0,72,2526	1/1:5,31:36:59.80:1191,60,0	0/0:18,0:18:54.19:0,54,1929	0/0:19,0:19:57.20:0,57,1996	0/0:33,0:33:96.33:0,96,3358	0/0:29,0:29:81.28:0,81,2842	0/0:29,0:29:87.30:0,87,3052	0/0:30,0:30:90.31:0,90,3203	0/0:7,0:7:21.07:0,21,757
chr10	9113797	.	A	AGTGT	3848.82	PASS	AB=1.000;AC=46;AF=0.885;AN=52;BaseQRankSum=-1.663;DP=620;FS=11.369;HRun=0;HaplotypeScore=117.3311;InbreedingCoeff=0.0843;MQ=68.27;MQ0=22;MQRankSum=2.170;QD=7.53;ReadPosRankSum=0.727;VQSLOD=1.5416;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:30,1:31:12.04:243,12,0	1/1:7,0:7:0.47:1,0,0	./.	./.	1/1:18,0:16:2.66:56,3,0	0/1:23,0:23:29.26:237,0,29	1/1:13,0:13:3.01:68,3,0	1/1:34,0:33:4.76:23,5,0	0/0:12,0:18:9.01:0,9,84	1/1:17,0:16:1.82:5,2,0	1/1:11,0:11:1.72:6,2,0	1/1:16,0:17:13.95:151,14,0	1/1:27,0:27:24.04:420,24,0	1/1:12,7:20:3.01:68,3,0	1/1:23,0:22:9.03:150,9,0	0/1:21,0:21:30.93:209,0,31	0/1:27,0:26:6.04:211,0,6	1/1:21,0:21:8.50:80,8,0	0/1:26,0:24:72.55:80,0,73	1/1:14,0:14:3.01:56,3,0	1/1:28,0:28:6.89:72,7,0	1/1:8,0:8:3.01:43,3,0	1/1:10,0:9:9.03:168,9,0	1/1:26,2:26:21.58:450,22,0	1/1:20,1:21:9.03:191,9,0	1/1:22,4:26:14.39:196,14,0	1/1:15,0:15:6.02:112,6,0	1/1:20,3:22:36.01:554,36,0
chr10	9113834	.	G	GTGTA	6549.68	PASS	AB=0.686;AC=35;AF=0.625;AN=56;BaseQRankSum=-4.716;DP=610;FS=38.919;HRun=0;HaplotypeScore=93.3533;InbreedingCoeff=-0.3523;MQ=56.72;MQ0=17;MQRankSum=3.785;QD=12.00;ReadPosRankSum=6.143;VQSLOD=2.4584;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:8,23:33:38.90:284,0,39	1/1:1,0:2:3:25,3,0	0/0:28,0:13:32.72:0,33,315	0/0:36,0:18:36.88:0,37,346	1/1:1,18:20:2.66:80,3,0	0/1:4,16:27:38.87:300,0,39	0/1:2,18:21:17.93:71,0,18	0/1:27,0:27:30.60:387,0,31	0/1:13,0:13:41.06:54,0,41	0/1:14,0:13:40.16:161,0,40	0/1:3,1:14:12.76:13,0,15	0/1:5,1:21:12.73:222,0,13	0/1:7,16:26:13.82:530,0,14	1/1:28,0:28:10.97:404,11,0	0/1:9,0:34:12.06:159,0,12	0/1:8,14:23:81.48:303,0,81	0/1:4,18:24:12.54:327,0,13	0/1:8,11:20:32.36:77,0,32	0/1:5,12:17:12.90:341,0,13	1/1:1,11:12:3.01:81,3,0	1/1:25,0:25:20.76:292,21,0	1/1:11,0:11:23.95:195,24,0	1/1:2,8:10:8.95:243,9,0	1/1:7,20:30:25.72:562,26,0	1/1:4,17:25:3.42:209,3,0	0/1:24,1:23:14.60:434,0,15	0/1:4,11:17:16.34:157,0,16	0/1:18,3:20:37.75:638,0,38
chr10	9115492	.	GTCTCTTTC	G	228.44	PASS	AB=0.882;AC=3;AF=0.054;AN=56;BaseQRankSum=3.696;DP=594;FS=5.476;HRun=0;HaplotypeScore=171.5785;InbreedingCoeff=-0.0526;MQ=55.71;MQ0=17;MQRankSum=-2.025;QD=4.39;ReadPosRankSum=-0.456;VQSLOD=2.4222;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:23:31.23:0,31,220	0/0:8,0:8:24.03:0,24,332	0/0:30,0:19:6.19:0,6,227	0/0:29,0:12:7.22:0,7,151	0/0:15,0:15:29.45:0,29,226	0/0:16,0:18:28.71:0,29,228	0/0:22,0:22:43.21:0,43,369	0/0:27,0:27:25.19:0,25,476	0/1:15,0:16:9.48:9,0,212	0/1:14,9:24:99:301,0,265	0/0:16,1:18:22.46:0,22,161	0/0:16,0:16:20.67:0,21,608	0/0:19,0:19:36.33:0,36,564	0/0:16,0:16:31.81:0,32,452	0/0:26,1:27:40.06:0,40,364	0/0:25,0:25:45.82:0,46,377	0/0:18,0:16:38.98:0,39,556	0/1:12,0:11:0.22:0,0,168	0/0:23,0:22:62.55:0,63,968	0/0:19,0:19:47.51:0,48,578	0/0:31,0:27:41.81:0,42,281	0/0:15,0:15:37.60:0,38,602	0/0:23,0:22:53.73:0,54,741	0/0:30,0:29:54.78:0,55,972	0/0:22,0:20:31.67:0,32,253	0/0:20,0:20:50.62:0,51,704	0/0:32,0:30:66.88:0,67,1251	0/0:11,0:10:20.97:0,21,180
chr10	9115498	.	TTCTCTCTCTCTCTC	T	323.55	PASS	AB=1.000;AC=15;AF=0.278;AN=54;BaseQRankSum=2.238;DP=580;FS=1.189;HRun=0;HaplotypeScore=213.6793;InbreedingCoeff=0.4591;MQ=53.16;MQ0=28;MQRankSum=-1.684;QD=1.83;ReadPosRankSum=-0.676;VQSLOD=2.7902;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,4:19:5.61:0,6,135	0/0:7,0:7:6.02:0,6,318	0/1:27,0:17:0:0,0,0	./.	0/0:10,3:15:0:0,0,1	1/1:13,1:17:2.62:20,3,0	1/1:19,0:19:9.01:147,9,0	1/1:26,0:22:2.94:20,3,0	1/1:11,2:15:2.22:77,2,0	0/1:24,0:23:57.51:58,0,249	0/0:8,0:15:0:0,0,1	0/1:16,0:16:4.83:5,0,805	0/0:21,0:19:27.06:0,27,771	0/0:15,0:15:11.10:0,11,375	0/0:17,0:25:12.04:0,12,254	0/0:18,7:24:0:0,0,0	0/0:20,0:17:18.82:0,19,593	1/1:8,3:10:3.01:114,3,0	0/0:27,0:26:27.18:0,27,1204	0/0:21,0:21:9.02:0,9,370	0/0:27,0:24:1.25:0,1,4	0/0:18,0:18:18.06:0,18,796	0/0:23,0:22:12.51:0,13,598	0/0:34,0:32:39.02:0,39,1406	1/1:13,6:18:2.80:20,3,0	0/0:21,0:20:30.10:0,30,1222	0/0:33,0:31:37.68:0,38,1628	0/0:10,0:9:3.01:0,3,76
chr10	9117230	.	G	GACACACAC	3192.15	PASS	AB=0.865;AC=26;AF=0.481;AN=54;BaseQRankSum=-0.984;DP=801;FS=4.519;HRun=0;HaplotypeScore=198.4910;InbreedingCoeff=0.3820;MQ=56.14;MQ0=17;MQRankSum=-2.992;QD=6.81;ReadPosRankSum=-6.179;VQSLOD=0.6192;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:17,15:33:3.01:86,3,0	0/1:8,0:9:6.60:7,0,316	./.	0/1:43,0:16:4.01:4,0,4	1/1:35,0:34:41.78:645,42,0	1/1:10,14:28:6.01:115,6,0	1/1:35,0:34:28.11:366,28,0	1/1:24,0:23:11.86:102,12,0	1/1:24,2:28:29.71:623,30,0	0/1:12,0:21:45.08:45,0,82	0/0:13,0:28:13.26:0,13,144	0/0:38,0:37:47.12:0,47,1421	0/0:42,0:42:1.65:0,2,1450	0/1:22,0:29:12.17:12,0,643	0/1:14,0:37:9.76:10,0,337	1/1:12,13:32:17.99:569,18,0	0/0:17,0:19:27.56:0,28,634	0/1:8,11:20:59.34:378,0,59	0/1:17,0:17:40.82:41,0,169	0/0:20,0:22:36.09:0,36,730	1/1:18,0:16:13.84:196,14,0	0/0:20,0:23:56.75:0,57,1148	0/0:24,0:30:46.96:0,47,813	0/0:36,0:44:69.36:0,69,1869	1/1:17,10:30:9.02:174,9,0	0/0:12,0:30:26.95:0,27,708	0/1:11,0:25:4.45:4,0,540	0/0:6,0:9:8.99:0,9,131
chr10	9118924	.	T	TA	15248.80	PASS	AB=0.941;AC=53;AF=0.946;AN=56;BaseQRankSum=-6.478;DP=546;FS=9.074;HRun=7;HaplotypeScore=49.3945;InbreedingCoeff=0.5629;MQ=73.11;MQ0=0;MQRankSum=-4.822;QD=28.56;ReadPosRankSum=4.046;VQSLOD=5.0844;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,25:28:54.17:652,54,0	1/1:1,8:9:24.07:290,24,0	0/1:15,1:16:27.94:28,0,244	0/0:12,0:11:10.73:0,11,127	1/1:4,25:29:75:857,75,0	1/1:2,18:20:48.15:580,48,0	1/1:2,23:25:69.21:834,69,0	1/1:5,38:43:99:1340,114,0	1/1:0,8:8:21.06:254,21,0	1/1:1,28:29:81.22:963,81,0	1/1:0,13:13:36.03:415,36,0	1/1:0,19:19:51.16:616,51,0	1/1:3,20:23:22.19:551,22,0	1/1:0,14:14:39.12:471,39,0	1/1:1,17:18:42.13:507,42,0	1/1:0,17:17:36.11:435,36,0	1/1:2,22:23:57.17:689,57,0	1/1:4,14:18:39.12:471,39,0	1/1:3,18:21:51.07:563,51,0	1/1:1,17:18:51.09:598,51,0	1/1:1,18:19:48.15:580,48,0	1/1:3,15:18:42.09:491,42,0	1/1:1,20:21:57.17:688,57,0	1/1:1,11:12:27.08:326,27,0	1/1:0,16:16:42.13:507,42,0	1/1:4,13:17:39.09:457,39,0	1/1:4,30:34:84.26:1015,84,0	1/1:3,2:5:6.02:73,6,0
chr10	9119137	.	T	TTGC	9977.17	PASS	AB=0.956;AC=39;AF=0.696;AN=56;BaseQRankSum=-3.919;DP=537;FS=89.993;HRun=0;HaplotypeScore=75.6131;InbreedingCoeff=0.0506;MQ=70.60;MQ0=5;MQRankSum=1.652;QD=22.47;ReadPosRankSum=5.230;VQSLOD=1.1207;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:23:99:190,0,256	0/1:7,0:7:81.79:85,0,82	0/0:20,0:17:41.45:0,41,442	0/0:24,0:19:39.06:0,39,419	0/1:11,0:11:49.84:175,0,50	0/1:23,0:23:99:207,0,235	0/1:25,0:25:99:369,0,188	0/1:22,0:22:27.86:28,0,224	0/1:17,0:17:67.01:238,0,67	1/1:1,17:19:50.63:738,51,0	1/1:2,15:17:20.49:365,20,0	1/1:0,11:12:24.08:526,24,0	0/1:1,12:13:20.34:375,0,20	1/1:1,19:20:27.09:595,27,0	1/1:4,18:23:39.13:851,39,0	0/1:13,0:13:26.86:205,0,27	1/1:0,23:23:45.07:943,45,0	0/1:20,0:20:99:284,0,127	1/1:5,15:19:44.88:416,45,0	1/1:1,17:18:32.79:468,33,0	0/0:49,0:48:99:0,120,1355	1/1:5,14:19:21.07:463,21,0	1/1:0,5:5:6.02:132,6,0	1/1:2,22:24:33.11:728,33,0	0/1:25,0:25:99:297,0,131	1/1:4,19:24:51.06:838,51,0	1/1:1,12:13:12.04:265,12,0	1/1:0,6:6:9.03:198,9,0
chr10	9120967	.	G	GA	14044.23	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=-16.762;DP=676;FS=4.963;HRun=5;HaplotypeScore=62.1126;InbreedingCoeff=0.9999;MQ=83.78;MQ0=0;MQRankSum=-2.256;QD=35.20;ReadPosRankSum=3.047;VQSLOD=5.1146;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:75.19:0,75,806	1/1:0,11:11:33.11:434,33,0	0/0:20,0:20:57.13:0,57,603	0/0:20,0:20:50.98:0,51,507	0/0:26,0:26:69.15:0,69,732	0/0:32,0:32:90.23:0,90,967	0/0:18,0:18:51.10:0,51,532	0/0:29,0:29:84.20:0,84,896	0/0:21,0:21:60.15:0,60,645	1/1:2,24:26:72.22:933,72,0	1/1:3,31:34:90.29:1184,90,0	1/1:2,20:22:63.20:828,63,0	1/1:2,27:29:69.22:904,69,0	1/1:2,23:25:72.23:945,72,0	1/1:1,23:24:69.22:908,69,0	0/0:18,0:18:48.12:0,48,516	1/1:4,17:21:45.15:592,45,0	0/0:20,0:20:57.10:0,57,600	1/1:3,21:24:66.21:868,66,0	1/1:0,25:25:72.19:927,72,0	0/0:21,0:21:63.12:0,63,659	1/1:1,18:19:48.16:632,48,0	1/1:1,24:25:66.21:868,66,0	1/1:0,24:24:66.21:867,66,0	0/0:24,0:24:72.18:0,72,773	1/1:7,33:41:99:1299,99,0	1/1:0,38:38:99:1460,111,0	1/1:1,10:11:30.10:395,30,0
chr10	9120998	.	AT	A	660.40	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=0.500;DP=611;FS=1.966;HRun=1;HaplotypeScore=88.1395;InbreedingCoeff=0.9827;MQ=78.30;MQ0=0;MQRankSum=-0.883;QD=36.69;ReadPosRankSum=-0.231;VQSLOD=3.6786;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:75.26:0,75,1199	0/0:12,0:12:36.12:0,36,576	0/0:15,0:15:43.68:0,44,612	0/0:12,0:12:14.70:0,15,363	0/0:29,0:29:87.30:0,87,1391	0/0:33,0:33:99:0,99,1583	0/0:15,0:15:45.14:0,45,693	0/0:32,0:32:96.31:0,96,1473	1/1:0,18:18:54.18:755,54,0	0/0:31,0:31:93.30:0,93,1464	0/0:23,0:23:69.24:0,69,1099	0/0:19,0:19:57.16:0,57,864	0/0:20,0:20:51.16:0,51,785	0/0:22,0:22:66.23:0,66,1055	0/0:18,0:18:54.18:0,54,861	0/0:11,0:11:33.11:0,33,528	0/0:23,0:23:63.21:0,63,1005	0/0:22,0:22:63.21:0,63,1007	0/0:28,0:28:84.29:0,84,1340	0/0:22,0:22:66.21:0,66,1028	0/0:13,0:13:39.11:0,39,599	0/0:19,0:19:57.18:0,57,887	0/0:23,0:23:69.24:0,69,1101	0/0:19,0:19:51.17:0,51,815	0/0:27,0:26:81.28:0,81,1295	0/0:34,0:34:99:0,102,1609	0/0:33,0:33:93.32:0,93,1484	0/0:12,0:12:36.10:0,36,549
chr10	9121922	.	A	AACACAC	17603.58	PASS	AB=0.595;AC=42;AF=0.750;AN=56;BaseQRankSum=-8.249;DP=881;FS=0.467;HRun=0;HaplotypeScore=190.8941;InbreedingCoeff=0.3320;MQ=58.98;MQ0=9;MQRankSum=-9.525;QD=24.02;ReadPosRankSum=-4.371;VQSLOD=3.8190;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:9,0:49:29.39:84,0,29	1/1:4,9:15:21.07:520,21,0	0/0:35,0:20:21.44:0,21,252	0/0:42,0:28:7.78:0,8,316	0/1:7,0:28:42.13:42,0,121	0/1:4,0:27:9.17:12,0,9	0/1:12,0:37:4.21:45,0,4	0/1:29,0:37:41.71:139,0,42	1/1:11,11:22:45:1124,45,0	1/1:8,26:44:93.52:2155,94,0	1/1:3,14:20:45.14:860,45,0	1/1:8,30:44:48.11:1185,48,0	1/1:8,25:37:36.12:1153,36,0	1/1:6,29:44:57.19:1441,57,0	1/1:4,21:30:39.03:1122,39,0	0/1:5,0:29:5:5,0,9	1/1:6,12:22:15.04:481,15,0	0/1:2,0:15:5.67:7,0,6	1/1:7,16:25:51.86:1042,52,0	1/1:4,23:31:57.14:1445,57,0	0/0:71,0:71:99:0,175,3327	1/1:6,17:29:33.25:909,33,0	1/1:4,15:19:20.94:520,21,0	1/1:7,24:34:12.01:283,12,0	0/1:9,0:18:3.09:11,0,3	1/1:4,20:27:59.38:1544,59,0	1/1:5,19:28:36.12:1014,36,0	1/1:2,6:10:18.03:463,18,0
chr10	9121968	.	TAC	T	900.15	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.453;DP=904;FS=0.000;HRun=0;HaplotypeScore=260.7447;InbreedingCoeff=0.8872;MQ=45.54;MQ0=31;MQRankSum=-6.428;QD=32.15;ReadPosRankSum=-2.818;VQSLOD=2.5063;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:43:78.21:0,78,1216	0/0:12,0:12:27:0,27,433	0/0:27,1:7:14.59:0,15,185	0/0:31,0:3:6.02:0,6,87	0/0:32,0:31:66.09:0,66,1015	0/0:31,0:30:78:0,78,1250	0/0:36,0:33:63.21:0,63,1028	0/0:63,0:37:99:0,102,1590	1/1:2,26:28:81.12:995,81,0	0/0:41,0:39:75.79:0,76,1215	0/0:20,0:20:51.10:0,51,795	0/0:38,0:38:83.86:0,84,1361	0/0:33,0:33:65.20:0,65,1085	0/0:42,0:42:91.86:0,92,1441	0/0:29,0:29:60.06:0,60,1004	0/0:34,0:34:78.27:0,78,1314	0/0:21,0:21:47.35:0,47,813	0/0:12,0:12:24.08:0,24,376	0/0:35,0:27:62.95:0,63,957	0/0:23,0:23:40.11:0,40,806	0/0:100,0:99:99:0,271,4518	0/0:29,0:29:60.04:0,60,913	0/0:13,0:13:27.04:0,27,446	0/0:41,0:41:93.26:0,93,1563	0/0:20,0:20:36.11:0,36,584	0/0:37,0:34:81.26:0,81,1322	0/0:16,0:16:32.81:0,33,490	0/0:14,0:14:33.03:0,33,437
chr10	9121999	.	AG	A	4662.69	PASS	AB=0.859;AC=32;AF=0.571;AN=56;BaseQRankSum=2.793;DP=814;FS=31.325;HRun=1;HaplotypeScore=212.8473;InbreedingCoeff=0.8111;MQ=48.00;MQ0=20;MQRankSum=8.066;QD=11.26;ReadPosRankSum=5.621;VQSLOD=1.0063;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:34:26.02:0,26,288	1/1:3,6:9:20.77:142,21,0	0/0:49,0:13:39.11:0,39,560	0/1:40,0:7:9.03:9,0,223	0/0:22,0:22:30.29:0,30,286	0/0:21,0:21:38.80:0,39,394	0/0:30,0:28:59.39:0,59,668	0/0:46,0:35:99:0,102,1302	0/0:26,0:26:26.79:0,27,252	1/1:16,16:31:16.09:335,16,0	1/1:5,9:14:32.36:241,32,0	1/1:14,23:37:77.83:523,78,0	1/1:8,19:27:19.94:299,20,0	1/1:17,22:40:34.23:399,34,0	1/1:9,12:21:46.84:313,47,0	0/0:30,0:30:38.03:0,38,349	1/1:2,20:22:6.63:263,7,0	0/0:14,0:14:32.71:0,33,319	0/1:14,9:21:68.88:153,0,69	1/1:6,15:21:18.42:302,18,0	0/0:100,0:99:99:0,259,4053	1/1:10,11:21:31.10:298,31,0	1/1:4,8:12:24.15:150,24,0	1/1:10,34:44:71.75:558,72,0	0/0:25,0:25:26.35:0,26,219	1/1:9,22:30:1.09:402,1,0	1/1:3,5:8:14.55:104,15,0	1/1:3,9:12:28.61:172,29,0
chr10	9122000	.	GACACAC	G	5426.64	PASS	AB=0.760;AC=15;AF=0.268;AN=56;BaseQRankSum=-12.181;DP=823;FS=0.415;HRun=0;HaplotypeScore=264.8327;InbreedingCoeff=0.9438;MQ=47.94;MQ0=19;MQRankSum=-2.859;QD=23.70;ReadPosRankSum=-4.878;VQSLOD=3.1258;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:25,12:35:0.85:302,0,1	0/0:9,0:9:17.09:0,17,196	0/0:50,0:13:21.03:0,21,352	0/0:43,0:8:20.03:0,20,253	1/1:11,11:22:26.94:570,27,0	1/1:9,12:21:42.09:766,42,0	1/1:21,10:29:23.88:873,24,0	1/1:39,9:35:79.72:1316,80,0	0/0:6,0:26:23.92:0,24,204	0/0:31,0:31:55.92:0,56,637	0/0:14,0:14:36.11:0,36,455	0/0:37,0:37:78.20:0,78,939	0/0:27,0:27:56.95:0,57,660	0/0:40,0:40:80.68:0,81,893	0/0:21,0:21:39.07:0,39,459	1/1:12,18:30:33.11:659,33,0	0/0:22,0:22:55.02:0,55,664	1/1:11,3:14:24.08:490,24,0	0/0:21,0:20:36.04:0,36,394	0/0:21,0:21:48.03:0,48,566	0/0:92,0:100:99:0,244,6093	0/0:21,0:21:30.08:0,30,364	0/0:13,0:13:24.06:0,24,295	0/0:44,0:44:84.12:0,84,997	1/1:2,23:25:24.06:450,24,0	0/0:32,0:31:90.12:0,90,1048	0/0:8,0:8:17.42:0,17,198	0/0:12,0:12:26.99:0,27,290
chr10	9122001	.	AC	A	4246.16	PASS	AB=0.620;AC=29;AF=0.518;AN=56;BaseQRankSum=2.699;DP=828;FS=7.171;HRun=1;HaplotypeScore=215.4676;InbreedingCoeff=0.6803;MQ=48.14;MQ0=17;MQRankSum=7.361;QD=11.17;ReadPosRankSum=8.015;VQSLOD=2.8846;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:35:15.19:0,15,194	1/1:3,6:9:17.81:122,18,0	0/0:49,0:13:39.13:0,39,535	0/0:44,0:8:10.43:0,10,274	0/0:22,0:22:11.27:0,11,118	0/0:21,0:21:26.18:0,26,211	0/0:31,0:29:40.26:0,40,479	0/0:46,0:35:95.22:0,95,916	0/0:26,0:26:10.98:0,11,78	1/1:16,14:31:1.92:293,2,0	1/1:6,9:15:37.31:253,37,0	1/1:15,23:38:75.37:511,75,0	1/1:8,18:27:15.52:296,16,0	1/1:19,22:41:37.20:424,37,0	1/1:10,12:22:40.93:280,41,0	0/0:30,0:30:16.36:0,16,168	1/1:2,20:22:0.88:257,1,0	0/0:14,0:14:20.52:0,21,178	0/1:11,9:19:70.02:132,0,70	1/1:7,15:22:16.78:302,17,0	0/0:102,0:100:99:0,257,3954	1/1:10,10:21:10.83:176,11,0	1/1:6,8:14:4.94:127,5,0	1/1:10,34:44:44.84:463,45,0	0/0:25,0:25:16.01:0,16,115	0/1:11,22:32:25.55:399,0,26	1/1:3,5:8:15.33:105,15,0	0/1:3,9:12:10.12:107,0,10
chr10	9122492	.	AGG	A	15052.78	PASS	AB=0.962;AC=53;AF=0.946;AN=56;BaseQRankSum=-5.929;DP=617;FS=2.989;HRun=10;HaplotypeScore=85.3399;InbreedingCoeff=0.7426;MQ=82.43;MQ0=1;MQRankSum=-6.990;QD=25.09;ReadPosRankSum=3.967;VQSLOD=4.9123;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,25:33:63.13:702,63,0	1/1:2,13:15:33.07:361,33,0	0/0:17,0:17:30.07:0,30,408	0/1:24,1:24:4.54:5,0,281	1/1:2,30:32:81.18:890,81,0	1/1:5,25:30:72.19:802,72,0	1/1:5,9:14:27.06:301,27,0	1/1:5,19:24:51.09:552,51,0	1/1:4,22:26:57.15:635,57,0	1/1:5,25:30:75.16:818,75,0	1/1:6,20:26:63.16:701,63,0	1/1:4,20:24:60.14:667,60,0	1/1:4,18:22:51.12:568,51,0	1/1:6,20:26:60.11:655,60,0	1/1:3,13:16:36.08:401,36,0	1/1:2,15:17:45.12:498,45,0	1/1:5,14:19:42.10:468,42,0	1/1:1,16:17:48.12:535,48,0	1/1:3,12:15:36.09:401,36,0	1/1:6,19:25:63.15:696,63,0	1/1:0,23:23:57.11:622,57,0	1/1:1,25:26:72.19:801,72,0	1/1:2,14:16:36.08:401,36,0	1/1:0,11:11:30.08:334,30,0	1/1:1,19:20:48.13:534,48,0	1/1:6,30:35:87.22:968,87,0	1/1:1,22:23:54.14:602,54,0	1/1:2,7:9:12.02:134,12,0
chr10	9122501	.	GGT	G	4492.47	PASS	AB=0.977;AC=38;AF=0.679;AN=56;BaseQRankSum=9.041;DP=602;FS=6.799;HRun=0;HaplotypeScore=117.4637;InbreedingCoeff=-0.2709;MQ=80.82;MQ0=1;MQRankSum=-1.166;QD=7.63;ReadPosRankSum=13.910;VQSLOD=1.3050;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:28,1:29:3.42:179,0,3	0/1:15,1:16:24.07:86,0,24	0/0:13,0:13:33.07:0,33,500	0/1:22,0:22:10.64:11,0,458	0/1:33,0:33:7.20:233,0,7	1/1:25,2:27:61.45:301,61,0	1/1:9,1:10:23.49:118,23,0	0/1:24,0:24:81.63:82,0,118	0/1:26,0:26:9.37:196,0,9	1/1:27,0:27:17.86:213,18,0	0/1:23,2:25:6.47:241,0,6	1/1:20,1:21:51.77:246,52,0	1/1:18,1:19:46.63:273,47,0	0/1:24,1:25:28.45:204,0,28	0/1:19,0:18:83.05:83,0,90	1/1:15,2:17:39.05:208,39,0	0/1:16,1:17:4.63:124,0,5	0/1:19,0:18:8.09:134,0,8	0/1:18,0:18:49.54:50,0,113	0/1:23,3:26:44.77:270,0,45	0/1:27,0:27:10.99:131,0,11	1/1:27,0:27:19.47:276,19,0	1/1:14,0:14:31.98:151,32,0	0/1:15,0:15:42.93:91,0,43	0/1:22,0:22:24.98:156,0,25	1/1:32,0:31:18.39:229,18,0	1/1:24,0:24:1.48:168,1,0	1/1:7,0:7:9.86:37,10,0
chr10	9125668	.	GACAC	G	3565.87	PASS	AB=0.827;AC=33;AF=0.635;AN=52;BaseQRankSum=-6.009;DP=817;FS=4.100;HRun=0;HaplotypeScore=213.0952;InbreedingCoeff=-0.3463;MQ=47.40;MQ0=52;MQRankSum=0.328;QD=4.77;ReadPosRankSum=-2.013;VQSLOD=2.4838;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:38,4:35:11.75:320,0,12	1/1:16,3:17:3.28:28,3,0	./.	./.	0/1:16,9:23:2.60:41,0,3	1/1:15,12:25:17.14:224,17,0	1/1:27,8:32:2.14:26,2,0	0/0:23,0:21:2.90:0,3,16	0/1:20,1:22:26.18:26,0,109	0/1:33,5:34:99:204,0,149	1/1:13,5:18:6.02:94,6,0	0/1:32,14:43:99:217,0,226	0/1:31,8:35:70.68:186,0,71	0/1:28,11:34:99:222,0,114	0/1:23,9:32:99:164,0,101	1/1:12,12:25:26.77:421,27,0	0/1:23,7:27:37.90:139,0,38	1/1:16,10:26:8.24:225,8,0	1/1:17,2:19:8.98:113,9,0	0/1:28,5:33:42.88:107,0,43	0/1:50,0:43:4.43:4,0,179	0/0:38,1:35:5.70:0,6,54	0/1:33,5:34:81.86:82,0,102	0/1:30,8:35:30.82:172,0,31	1/1:16,10:26:1.87:155,2,0	0/1:35,8:38:99:238,0,103	1/1:16,1:14:7.54:74,8,0	0/1:5,7:12:30.62:85,0,31
chr10	9125676	.	C	CAG	6601.11	PASS	AB=0.966;AC=37;AF=0.661;AN=56;BaseQRankSum=0.335;DP=830;FS=20.065;HRun=0;HaplotypeScore=189.6920;InbreedingCoeff=0.0833;MQ=46.82;MQ0=61;MQRankSum=3.133;QD=9.02;ReadPosRankSum=5.470;VQSLOD=2.8807;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:45,0:38:16.72:417,17,0	1/1:17,0:15:4.25:111,4,0	0/0:10,0:3:5.87:0,6,35	0/0:15,0:2:5.95:0,6,42	1/1:25,0:23:6.63:220,7,0	1/1:27,0:25:28.95:293,29,0	0/1:36,1:33:2.16:308,0,2	0/1:23,0:18:22.05:22,0,136	0/0:21,0:19:32.53:0,33,276	0/1:37,2:36:39.86:501,0,40	1/1:17,0:16:25.60:188,26,0	0/1:43,6:45:4.13:445,0,4	1/1:37,4:37:3.73:444,4,0	0/1:35,4:34:8.52:377,0,9	1/1:28,4:32:46.62:392,47,0	1/1:25,0:25:41.87:273,42,0	1/1:27,1:25:36.64:266,37,0	0/1:26,1:26:39.34:171,0,39	0/1:14,0:14:48.16:99,0,48	0/1:27,0:27:0.52:211,0,1	0/0:52,0:44:42.47:0,42,433	1/1:34,2:32:35.91:325,36,0	1/1:37,0:33:0.75:295,1,0	1/1:38,0:36:14.14:285,14,0	1/1:26,1:25:21.86:327,22,0	0/1:42,3:40:48:529,0,48	0/1:24,0:21:68.06:86,0,68	0/1:12,0:12:16.46:16,0,22
chr10	9128466	.	TCAAA	T	7601.62	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=15.950;DP=606;FS=5.690;HRun=0;HaplotypeScore=108.8370;InbreedingCoeff=0.9884;MQ=90.69;MQ0=0;MQRankSum=-8.652;QD=43.44;ReadPosRankSum=-0.301;VQSLOD=5.2137;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,17:18:45.15:871,45,0	0/0:11,0:11:33.11:0,33,903	0/0:35,0:35:96.28:0,96,2232	0/0:15,0:16:17.62:0,18,817	1/1:1,24:25:51.17:921,51,0	1/1:3,30:33:60.21:1160,60,0	1/1:2,14:16:30.10:556,30,0	1/1:3,34:37:99:1909,102,0	0/0:17,0:17:48.16:0,48,1259	0/0:23,0:23:69.24:0,69,1884	0/0:26,0:26:75.20:0,75,1947	0/0:12,0:12:36.12:0,36,956	0/0:32,0:32:93.32:0,93,2541	0/0:25,0:25:75.24:0,75,1989	0/0:36,0:36:99:0,108,2802	1/1:0,19:19:45.15:870,45,0	0/0:23,0:23:69.24:0,69,1842	1/1:1,14:15:36.12:676,36,0	0/0:25,0:25:75.25:0,75,1899	0/0:31,0:31:90.30:0,90,2402	0/0:10,0:10:27.02:0,27,675	0/0:15,0:15:42.14:0,42,1150	0/0:30,0:30:90.31:0,90,2355	0/0:16,0:16:48.16:0,48,1285	1/1:1,11:12:33.11:639,33,0	0/0:23,0:23:69.23:0,69,1767	0/0:18,0:18:51.17:0,51,1329	0/0:7,0:7:9.03:0,9,246
chr10	9129882	.	CACACACACAG	C	1616.07	PASS	AB=1.000;AC=20;AF=0.357;AN=56;BaseQRankSum=-5.815;DP=534;FS=14.094;HRun=0;HaplotypeScore=143.3309;InbreedingCoeff=-0.1285;MQ=54.43;MQ0=26;MQRankSum=2.249;QD=5.35;ReadPosRankSum=-5.448;VQSLOD=-0.3745;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:34:3:0,3,25	0/1:6,0:5:37.86:38,0,157	0/0:14,0:4:2.88:0,3,25	0/0:28,0:8:8.11:0,8,122	1/1:4,16:20:3.48:81,3,0	0/1:13,0:13:18.52:48,0,19	0/1:31,0:30:64.12:64,0,75	1/1:19,0:18:6.24:219,6,0	0/0:15,0:15:8.93:0,9,108	0/1:11,0:11:99:130,0,144	0/0:14,0:14:5.95:0,6,97	0/0:26,0:24:6.62:0,7,123	0/1:16,0:16:41.90:42,0,441	0/1:16,0:16:63.69:64,0,453	0/1:22,0:22:79.64:80,0,494	1/1:21,0:21:3.01:42,3,0	0/1:36,0:36:99:135,0,1024	0/1:16,0:15:99:188,0,120	0/1:13,0:11:72.68:73,0,404	0/0:18,0:17:12:0,12,338	0/1:30,0:27:29.24:253,0,29	0/0:17,0:17:8.92:0,9,198	0/0:16,0:15:7.70:0,8,88	0/0:30,0:30:8.89:0,9,84	1/1:13,0:13:27.66:211,28,0	0/1:19,0:19:99:113,0,503	0/0:15,0:15:5.69:0,6,159	0/0:4,0:3:9.03:0,9,244
chr10	9129886	.	CACACAG	C	2870.01	PASS	AB=0.965;AC=31;AF=0.554;AN=56;BaseQRankSum=-4.354;DP=526;FS=30.182;HRun=0;HaplotypeScore=118.1894;InbreedingCoeff=0.0023;MQ=55.28;MQ0=25;MQRankSum=-0.762;QD=6.64;ReadPosRankSum=-2.243;VQSLOD=0.4339;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:32:0.02:0,0,0	0/1:6,0:5:37.86:38,0,51	0/0:15,0:5:8.84:0,9,69	0/1:26,0:9:4.31:4,0,46	1/1:19,0:20:5.95:71,6,0	1/1:11,0:11:13.33:111,13,0	0/1:30,0:29:29.19:68,0,29	1/1:19,0:18:45.78:360,46,0	1/1:17,0:17:7.99:38,8,0	1/1:13,0:13:35.71:314,36,0	0/1:13,0:13:20.77:30,0,21	0/0:26,0:24:6.31:0,6,72	0/1:16,0:16:70.27:70,0,112	0/1:17,0:17:76.84:146,0,77	0/1:26,0:26:99:233,0,104	1/1:21,0:21:3.01:54,3,0	0/1:35,0:35:99:231,0,260	0/1:15,0:14:29.50:170,0,29	0/1:15,0:12:99:124,0,111	0/0:17,0:17:11.85:0,12,144	1/1:29,0:26:9.97:225,10,0	0/0:17,0:17:5.93:0,6,45	1/1:4,11:14:8.94:118,9,0	0/1:4,22:26:13.77:86,0,14	1/1:12,0:12:32.88:378,33,0	0/1:17,0:17:93.74:174,0,94	0/0:15,0:15:5.85:0,6,56	0/0:4,0:3:9.01:0,9,87
chr10	9129888	.	CACAG	C	3543.63	PASS	AB=0.992;AC=39;AF=0.696;AN=56;BaseQRankSum=-1.698;DP=525;FS=36.468;HRun=0;HaplotypeScore=107.8669;InbreedingCoeff=0.1845;MQ=56.85;MQ0=25;MQRankSum=0.931;QD=7.96;ReadPosRankSum=2.412;VQSLOD=0.9628;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:32:0:0,0,0	1/1:6,0:5:4.86:48,5,0	0/0:17,0:7:14.82:0,15,117	0/1:27,0:10:13.27:13,0,40	1/1:20,0:20:5.95:57,6,0	1/1:11,0:11:11.34:96,11,0	0/1:29,0:28:33.13:33,0,35	1/1:20,0:19:44.87:349,45,0	1/1:2,16:18:8.96:155,9,0	1/1:13,0:13:39.04:394,39,0	1/1:13,0:13:2.80:16,3,0	0/0:26,0:24:1.16:0,1,3	1/1:16,0:16:15.58:127,16,0	0/1:18,0:18:16.86:277,0,17	1/1:23,1:24:7.25:353,7,0	1/1:21,0:21:3.01:39,3,0	0/1:30,2:32:34.45:318,0,34	0/1:15,0:14:39.41:173,0,39	0/1:15,0:12:55.45:157,0,55	0/0:17,1:18:6.36:0,6,90	1/1:29,0:26:15.95:270,16,0	1/1:18,0:18:2.59:23,3,0	1/1:14,0:13:7.77:57,8,0	1/1:26,0:26:8.64:59,9,0	1/1:12,0:12:32.85:293,33,0	1/1:15,0:15:9.12:234,9,0	0/0:15,0:15:1.74:0,2,4	0/0:4,0:3:3.16:0,3,8
chr10	9129890	.	CAG	C	4966.09	PASS	AB=0.967;AC=52;AF=0.929;AN=56;BaseQRankSum=-0.198;DP=519;FS=0.000;HRun=0;HaplotypeScore=91.1334;InbreedingCoeff=0.3324;MQ=57.64;MQ0=25;MQRankSum=-2.501;QD=9.95;ReadPosRankSum=3.360;VQSLOD=4.4370;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:32,1:32:0:0,0,0	1/1:6,0:5:12.01:127,12,0	0/0:20,0:10:17.36:0,17,165	0/1:26,0:10:13.64:14,0,40	1/1:19,1:20:5.94:43,6,0	1/1:10,0:10:11.63:91,12,0	1/1:28,0:27:3.01:31,3,0	1/1:19,0:18:44.52:348,45,0	1/1:18,0:18:7.39:67,7,0	1/1:13,0:13:38.99:354,39,0	1/1:1,12:13:5.93:61,6,0	1/1:3,21:22:3:42,3,0	1/1:13,2:15:26.85:256,27,0	1/1:18,0:18:38.97:341,39,0	1/1:21,1:22:47.56:469,48,0	1/1:21,0:21:2.96:25,3,0	1/1:25,7:32:71.53:718,72,0	1/1:15,0:14:29.21:216,29,0	1/1:15,0:12:29.14:239,29,0	1/1:3,14:17:6.02:81,6,0	1/1:29,0:26:18.92:291,19,0	1/1:0,18:18:8.94:96,9,0	1/1:14,0:13:8.94:95,9,0	1/1:25,0:25:8.85:59,9,0	1/1:12,0:12:32.97:281,33,0	1/1:13,3:16:33.18:409,33,0	1/1:1,14:15:6:86,6,0	1/1:1,3:3:9.03:126,9,0
chr10	9133537	.	TTG	T	4837.55	PASS	AB=0.758;AC=41;AF=0.732;AN=56;BaseQRankSum=4.647;DP=606;FS=1.224;HRun=0;HaplotypeScore=105.9445;InbreedingCoeff=0.4198;MQ=54.63;MQ0=13;MQRankSum=1.692;QD=10.90;ReadPosRankSum=2.769;VQSLOD=4.5273;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:43:73.66:387,74,0	1/1:1,1:2:3.01:34,3,0	0/0:50,0:24:11.34:0,11,144	0/0:49,0:19:6:0,6,64	1/1:3,0:11:8.52:42,9,0	1/1:7,1:18:34.09:185,34,0	1/1:11,0:29:39.68:194,40,0	1/1:22,0:32:8.66:91,9,0	0/0:7,0:19:14.54:0,15,185	0/1:15,1:15:12.99:13,0,255	0/0:6,0:5:12.02:0,12,162	1/1:4,12:17:26.91:286,27,0	1/1:5,11:20:41.53:399,42,0	1/1:6,18:24:42.12:477,42,0	0/1:23,3:26:44.51:45,0,655	1/1:3,0:18:39.77:195,40,0	1/1:15,15:37:12.49:435,12,0	1/1:8,0:19:11.44:120,11,0	1/1:6,1:8:8.84:72,9,0	0/1:3,6:9:25:183,0,25	0/0:26,0:38:8.97:0,9,71	0/1:4,4:7:31.08:107,0,31	0/1:7,6:13:19.22:209,0,19	1/1:18,25:44:25.82:717,26,0	1/1:3,0:6:2.84:14,3,0	1/1:7,4:12:23.70:214,24,0	1/1:5,8:16:26.57:246,27,0	1/1:5,3:11:23.23:172,23,0
chr10	9136077	.	TG	T	33.40	PASS	AB=0.692;AC=1;AF=0.018;AN=56;BaseQRankSum=1.686;DP=739;FS=12.542;HRun=6;HaplotypeScore=85.6562;InbreedingCoeff=-0.0182;MQ=86.95;MQ0=0;MQRankSum=-2.297;QD=3.71;ReadPosRankSum=-1.122;VQSLOD=-0.5175;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,111,1444	0/0:9,0:9:27.08:0,27,343	0/0:33,0:33:90:0,90,1113	0/0:17,0:17:37.53:0,38,463	0/0:25,0:25:72.22:0,72,933	0/0:28,0:28:84.27:0,84,1103	0/0:23,0:23:66.21:0,66,869	0/0:19,0:19:51.16:0,51,658	0/0:34,0:34:93.30:0,93,1224	0/0:27,0:27:63.20:0,63,817	0/0:19,0:19:54.18:0,54,709	0/0:34,0:34:93.28:0,93,1194	0/0:33,0:33:96.31:0,96,1262	0/0:20,0:20:57.17:0,57,734	0/0:40,0:40:99:0,114,1499	0/0:30,0:30:84.26:0,84,1093	0/0:23,0:23:66.16:0,66,835	0/0:22,0:22:63.20:0,63,829	0/0:30,0:29:81.26:0,81,1055	0/0:20,0:20:54.17:0,54,705	0/0:30,0:30:87.28:0,87,1145	0/0:24,0:24:63.20:0,63,826	0/0:27,0:27:78.24:0,78,1002	0/0:28,0:28:81.26:0,81,1064	0/0:25,0:25:75.24:0,75,986	0/0:37,0:37:99:0,111,1435	0/0:32,0:32:90.17:0,90,1102	0/1:5,4:9:97.33:108,0,97
chr10	9137403	.	ACGCT	A	5474.82	PASS	AB=0.970;AC=40;AF=0.741;AN=54;BaseQRankSum=-2.326;DP=577;FS=47.159;HRun=0;HaplotypeScore=154.0786;InbreedingCoeff=0.0929;MQ=70.56;MQ0=14;MQRankSum=-1.375;QD=12.30;ReadPosRankSum=8.650;VQSLOD=2.1964;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:24,8:29:10.81:497,0,11	1/1:6,0:6:8.94:80,9,0	0/0:42,0:29:70.81:0,71,599	0/0:51,0:25:60.34:0,60,1069	1/1:2,24:26:3.01:35,3,0	0/0:3,15:18:5.94:0,6,58	1/1:1,20:21:5.58:102,6,0	1/1:6,27:31:75.26:1327,75,0	1/1:16,0:19:36.32:294,36,0	0/1:17,0:15:57.07:159,0,57	1/1:9,0:9:15.45:126,15,0	0/1:16,0:15:40.34:154,0,40	1/1:23,0:23:10.22:311,10,0	0/1:24,0:24:32.57:182,0,33	0/1:25,0:24:0.71:242,0,1	./.	1/1:16,0:17:1.97:157,2,0	1/1:1,11:12:6.02:111,6,0	0/1:14,0:13:12.57:181,0,13	1/1:0,0:16:2.96:19,3,0	0/1:15,0:15:30.98:37,0,31	1/1:12,0:12:14.95:125,15,0	1/1:13,0:12:11.99:99,12,0	1/1:26,0:25:5.82:280,6,0	1/1:10,5:14:1.36:323,1,0	0/1:22,0:22:66.19:305,0,66	1/1:21,0:20:11.79:191,12,0	1/1:9,0:8:18.80:140,19,0
chr10	9138208	.	TG	T	5622.59	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=1.114;DP=738;FS=13.468;HRun=7;HaplotypeScore=116.6042;InbreedingCoeff=0.9927;MQ=65.20;MQ0=3;MQRankSum=-1.307;QD=24.03;ReadPosRankSum=0.111;VQSLOD=3.3308;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,37:40:92.51:947,93,0	0/0:8,0:8:18.04:0,18,206	0/0:24,0:21:47.11:0,47,473	0/0:16,0:16:30.52:0,31,284	1/1:2,21:23:63.14:642,63,0	1/1:4,14:18:42.09:428,42,0	1/1:4,33:35:93.20:947,93,0	1/1:4,24:27:60.13:610,60,0	0/0:25,0:25:69.22:0,69,860	0/0:25,0:24:37.81:0,38,631	0/0:18,0:18:27.10:0,27,423	0/0:26,0:26:75.19:0,75,889	0/0:43,0:43:99:0,117,1413	0/0:35,0:35:84.68:0,85,978	0/0:31,0:31:75.24:0,75,928	1/1:2,23:24:63.14:642,63,0	0/0:42,0:42:99:0,120,1467	1/1:0,24:23:60.14:612,60,0	0/0:13,0:13:15.08:0,15,305	0/0:17,0:17:20.17:0,20,386	0/0:68,0:68:99:0,190,2331	0/0:19,0:19:48.15:0,48,590	0/0:13,0:13:17.13:0,17,323	0/0:31,0:31:56.50:0,56,944	1/1:4,32:36:78.17:795,78,0	0/0:22,0:22:51.18:0,51,614	0/0:19,0:19:26.70:0,27,526	0/0:8,0:8:24.03:0,24,268
chr10	9139837	.	A	AAAGT	4096	PASS	AB=1.000;AC=44;AF=0.786;AN=56;BaseQRankSum=-2.937;DP=284;FS=7.981;HRun=0;HaplotypeScore=63.6654;InbreedingCoeff=0.0637;MQ=80.65;MQ0=1;MQRankSum=-1.324;QD=15.57;ReadPosRankSum=2.088;VQSLOD=2.0017;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:7,0:7:5.81:82,0,6	1/1:5,0:5:11.92:91,12,0	0/0:13,0:13:8.91:0,9,89	0/0:8,0:8:2.28:0,2,64	1/1:14,0:13:23.87:184,24,0	1/1:12,0:12:24.04:291,24,0	1/1:4,0:4:5.99:50,6,0	1/1:30,0:29:68.69:550,69,0	1/1:14,0:14:29.56:211,30,0	1/1:5,0:5:6:54,6,0	1/1:2,3:5:8.86:110,9,0	1/1:9,0:9:14.98:123,15,0	0/1:3,0:3:11.68:38,0,12	0/1:12,0:12:35.98:117,0,36	1/1:14,0:14:32.94:270,33,0	1/1:9,0:9:5.94:93,6,0	0/1:28,0:28:99:307,0,118	1/1:9,0:9:17.91:153,18,0	0/1:8,0:8:1.69:108,0,2	1/1:13,0:13:29.93:240,30,0	1/1:6,0:6:8.86:59,9,0	1/1:6,0:6:8.92:67,9,0	1/1:3,5:8:8.82:108,9,0	0/1:7,0:6:2.69:102,0,3	1/1:14,0:14:35.95:407,36,0	1/1:5,0:5:11.78:84,12,0	0/1:11,0:11:33.95:139,0,34	0/1:5,0:5:13.30:58,0,13
chr10	9139844	.	G	GTAAGTAAGTAAA	5096.55	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=-6.497;DP=255;FS=12.908;HRun=0;HaplotypeScore=96.6865;InbreedingCoeff=0.1638;MQ=70.68;MQ0=3;MQRankSum=-2.413;QD=27.40;ReadPosRankSum=-1.976;VQSLOD=2.7894;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:7,0:7:35.57:257,0,36	0/0:4,0:4:3.87:0,4,10	0/0:8,0:8:5.12:0,5,146	0/0:5,0:5:2.39:0,2,126	1/1:11,0:10:24.06:344,24,0	1/1:9,0:9:24.05:687,24,0	1/1:3,0:3:8.98:118,9,0	1/1:33,0:28:75.05:1110,75,0	1/1:13,0:13:9.10:351,9,0	0/0:2,0:2:0.94:0,1,2	0/0:4,0:4:5.31:0,5,26	0/1:6,0:6:21.24:38,0,21	0/0:4,0:4:6.95:0,7,113	0/1:10,0:10:6.61:7,0,253	0/1:12,0:12:5.15:84,0,5	1/1:0,5:6:5.85:319,6,0	0/0:31,0:31:24.65:0,25,763	1/1:10,0:9:21.07:436,21,0	0/1:7,0:7:39.20:39,0,78	1/1:11,0:11:5.33:65,5,0	0/1:6,0:6:22.81:82,0,23	1/1:5,0:5:2.48:25,2,0	0/0:5,0:5:3.31:0,3,10	0/1:7,0:6:15.92:16,0,102	1/1:15,0:15:36.11:1098,36,0	0/0:5,0:6:4.02:0,4,15	0/1:10,0:10:8.90:9,0,228	0/1:5,0:5:12.26:12,0,70
chr10	9140266	.	CTG	C	1923.13	PASS	AB=1.000;AC=22;AF=0.393;AN=56;BaseQRankSum=4.941;DP=588;FS=4.879;HRun=0;HaplotypeScore=125.6710;InbreedingCoeff=0.4452;MQ=50.26;MQ0=15;MQRankSum=-0.388;QD=5.99;ReadPosRankSum=-3.467;VQSLOD=2.5327;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:33,1:34:37.49:333,37,0	0/0:10,0:10:16.11:0,16,128	0/0:7,0:5:8.95:0,9,69	0/0:9,0:6:3.51:0,4,66	1/1:10,1:10:18.03:130,18,0	1/1:32,1:31:43.27:351,43,0	1/1:29,0:28:3.88:169,4,0	1/1:28,0:26:3.72:134,4,0	0/1:20,0:19:2.70:3,0,212	0/1:32,0:32:1.26:1,0,591	0/0:16,0:16:20.30:0,20,146	0/0:19,1:20:23.75:0,24,350	0/0:23,0:23:15.90:0,16,418	0/0:17,0:17:6.53:0,7,323	0/1:27,0:27:69.92:70,0,346	1/1:15,2:15:3.96:189,4,0	0/0:31,0:29:59.64:0,60,682	1/1:7,1:8:18.75:158,19,0	0/0:10,0:10:10.19:0,10,142	0/0:14,0:14:6.50:0,6,272	0/1:18,0:18:34.42:251,0,34	0/0:26,0:25:38.21:0,38,537	0/0:19,0:18:24.90:0,25,305	0/0:32,0:32:53.99:0,54,674	1/1:23,0:23:35.88:292,36,0	0/0:32,1:33:0.22:0,0,680	0/1:27,0:24:16.94:17,0,354	0/1:13,0:10:6.63:7,0,53
chr10	9140318	.	A	ATG	12397.19	PASS	AB=0.588;AC=33;AF=0.589;AN=56;BaseQRankSum=-15.091;DP=738;FS=0.696;HRun=0;HaplotypeScore=129.0389;InbreedingCoeff=0.9027;MQ=59.73;MQ0=11;MQRankSum=0.707;QD=30.39;ReadPosRankSum=6.893;VQSLOD=6.4956;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:59.71:0,60,802	1/1:1,16:17:33.11:541,33,0	0/0:39,0:20:30.09:0,30,373	0/0:55,0:41:55.06:0,55,759	0/0:21,0:21:57.18:0,57,705	0/0:28,0:28:49.39:0,49,590	0/0:27,0:27:57.65:0,58,712	0/0:35,0:34:82.10:0,82,955	1/1:7,14:21:7.63:653,8,0	1/1:10,15:27:51.17:824,51,0	1/1:5,19:24:45.15:730,45,0	1/1:4,21:25:41.68:738,42,0	1/1:2,27:28:51.17:829,51,0	1/1:4,13:17:21.07:347,21,0	1/1:1,28:29:72.25:1189,72,0	0/0:25,0:24:72.19:0,72,872	1/1:10,14:24:13.01:470,13,0	0/0:11,0:11:9.13:0,9,281	1/1:6,9:13:25.59:355,26,0	1/1:5,21:25:19.77:852,20,0	0/0:24,0:23:48.11:0,48,587	1/1:5,19:25:44.73:742,45,0	1/1:1,23:25:51.17:842,51,0	1/1:5,28:33:63.22:1040,63,0	0/0:27,0:26:50.92:0,51,614	1/1:8,31:39:77.17:1421,77,0	1/1:2,19:21:38.20:641,38,0	0/1:3,7:10:22.46:183,0,22
chr10	9140542	.	CTG	C	1253.30	PASS	AB=0.923;AC=28;AF=0.538;AN=52;BaseQRankSum=2.577;DP=762;FS=23.062;HRun=0;HaplotypeScore=109.2726;InbreedingCoeff=0.5275;MQ=56.78;MQ0=36;MQRankSum=0.304;QD=3.29;ReadPosRankSum=-0.583;VQSLOD=0.9520;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:27.35:0,27,269	0/0:7,0:7:9.01:0,9,95	0/0:52,0:8:0.47:0,0,1	./.	0/0:21,0:26:8.98:0,9,73	0/0:20,0:28:15:0,15,146	0/0:22,0:27:12.47:0,12,119	0/0:28,0:27:8.83:0,9,54	1/1:15,4:19:14.87:143,15,0	1/1:14,0:20:5.23:25,5,0	1/1:11,0:19:13.85:65,14,0	1/1:20,9:29:17.65:194,18,0	1/1:17,11:28:26.90:273,27,0	1/1:16,7:22:2.99:32,3,0	1/1:14,0:23:14.04:70,14,0	0/0:18,0:29:18.02:0,18,192	1/1:19,3:24:11.85:111,12,0	0/0:12,0:18:18.01:0,18,175	1/1:14,2:16:3:32,3,0	1/1:28,0:27:5.99:55,6,0	./.	0/1:15,2:17:59.70:60,0,77	0/1:21,0:21:27.87:28,0,45	1/1:23,11:35:20.61:189,21,0	0/0:19,0:33:38.99:0,39,367	1/1:28,1:30:8.01:76,8,0	0/1:25,4:29:35.47:36,0,35	0/1:15,1:16:8.97:51,0,9
chr10	9140852	.	CT	C	5748.66	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=1.226;DP=677;FS=3.679;HRun=9;HaplotypeScore=90.5652;InbreedingCoeff=0.9973;MQ=83.34;MQ0=1;MQRankSum=-3.172;QD=21.94;ReadPosRankSum=2.022;VQSLOD=5.5059;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,26:26:68.99:623,69,0	0/0:10,0:10:27.08:0,27,312	0/0:17,0:17:20.30:0,20,382	0/0:25,0:25:45.95:0,46,485	1/1:3,24:27:63.02:576,63,0	1/1:2,40:42:99:1043,114,0	1/1:2,25:27:57.03:522,57,0	1/1:4,29:33:86.95:775,87,0	0/0:18,0:18:48.06:0,48,535	0/0:26,0:26:60.17:0,60,686	0/0:25,0:24:63.17:0,63,706	0/0:27,2:29:20.67:0,21,724	0/0:25,1:26:38.73:0,39,699	0/0:26,0:26:66.20:0,66,762	0/0:23,0:23:54.15:0,54,614	1/1:1,24:25:60.03:549,60,0	0/0:26,0:26:72.17:0,72,800	1/1:3,22:25:54.02:494,54,0	0/0:15,0:15:30.08:0,30,338	0/0:26,0:26:68.95:0,69,758	1/1:2,20:22:41.88:369,42,0	0/0:21,0:21:60.14:0,60,665	0/0:16,0:16:42.06:0,42,468	0/0:9,0:9:24.07:0,24,277	1/1:4,31:35:87.04:796,87,0	0/0:30,0:30:75.22:0,75,865	0/0:34,0:35:90.09:0,90,1009	0/0:12,0:12:21.06:0,21,242
chr10	9140892	.	ATG	A	9168.87	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=3.541;DP=769;FS=3.460;HRun=0;HaplotypeScore=123.3687;InbreedingCoeff=0.9780;MQ=71.27;MQ0=9;MQRankSum=0.988;QD=21.88;ReadPosRankSum=2.990;VQSLOD=5.1463;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:30:37.87:0,38,723	1/1:3,5:8:15.05:178,15,0	0/0:44,0:28:18.04:0,18,234	0/0:46,0:35:23.95:0,24,235	0/0:25,1:26:21.51:0,22,794	0/0:45,1:46:95.65:0,96,1430	0/0:30,1:31:30.39:0,30,921	0/0:41,0:41:82.05:0,82,1139	1/1:7,0:21:34.09:168,34,0	1/1:9,27:36:81.18:929,81,0	1/1:2,15:17:26.91:288,27,0	1/1:9,28:38:74.59:861,75,0	1/1:5,18:23:48.15:569,48,0	1/1:5,20:26:63.02:725,63,0	1/1:2,31:33:78.24:923,78,0	0/0:26,0:26:22.69:0,23,817	1/1:8,13:21:39.12:460,39,0	0/0:22,0:22:51.10:0,51,729	1/1:7,16:22:21.10:408,21,0	1/1:6,23:29:66.20:780,66,0	1/1:13,0:23:22.32:106,22,0	1/1:7,20:28:47.81:523,48,0	1/1:3,6:10:6.02:69,6,0	1/1:3,8:14:29.76:312,30,0	0/0:35,1:36:45.71:0,46,1186	1/1:3,23:26:69.19:805,69,0	1/1:6,26:32:66.20:780,66,0	1/1:0,9:9:24.07:284,24,0
chr10	9142059	.	A	AG	890.06	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-6.074;DP=744;FS=0.779;HRun=4;HaplotypeScore=91.1042;InbreedingCoeff=0.9450;MQ=76.03;MQ0=0;MQRankSum=-3.208;QD=29.67;ReadPosRankSum=2.599;VQSLOD=3.6318;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:87.18:0,87,936	0/0:12,0:12:36.09:0,36,398	0/0:20,0:20:53.57:0,54,559	0/0:17,0:17:39:0,39,408	0/0:22,0:22:63.16:0,63,692	0/0:16,0:16:45.10:0,45,491	0/0:28,0:28:78.21:0,78,867	0/0:26,0:26:69.19:0,69,766	1/1:1,29:30:72.24:985,72,0	0/0:32,0:32:96.27:0,96,1088	0/0:15,0:15:45.13:0,45,510	0/0:39,0:39:99:0,117,1315	0/0:28,0:28:75.19:0,75,838	0/0:35,0:35:96.26:0,96,1079	0/0:30,0:30:87.25:0,87,987	0/0:22,0:21:63.15:0,63,691	0/0:20,0:20:57.16:0,57,647	0/0:30,0:30:75.20:0,75,834	0/0:26,0:26:75.21:0,75,844	0/0:39,0:39:99:0,108,1222	0/0:30,0:30:84.24:0,84,952	0/0:35,0:35:99:0,99,1096	0/0:26,0:26:78.19:0,78,864	0/0:31,0:31:84.24:0,84,953	0/0:29,0:29:81.22:0,81,902	0/0:36,0:36:99:0,99,1116	0/0:37,0:37:99:0,111,1250	0/0:4,0:4:9.02:0,9,102
chr10	9142849	.	GTT	G	4145.16	PASS	AB=0.713;AC=18;AF=0.321;AN=56;BaseQRankSum=13.614;DP=652;FS=3.025;HRun=13;HaplotypeScore=96.7976;InbreedingCoeff=0.8329;MQ=67.75;MQ0=0;MQRankSum=1.696;QD=17.06;ReadPosRankSum=4.638;VQSLOD=3.1568;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,22:28:64.55:586,65,0	0/0:7,0:9:20.02:0,20,199	0/0:10,0:11:14.24:0,14,205	0/1:7,1:8:15.91:16,0,64	1/1:7,23:33:51.94:503,52,0	1/1:7,30:38:29.85:659,30,0	1/1:3,10:15:11.89:216,12,0	1/1:16,21:40:40.48:533,40,0	1/1:4,18:22:48.06:465,48,0	0/0:30,0:31:57.64:0,58,772	0/0:22,0:24:62.64:0,63,822	0/0:23,0:25:57.11:0,57,730	0/0:21,0:22:62.61:0,63,774	0/0:17,0:19:47.56:0,48,546	0/0:28,0:29:66.19:0,66,901	1/1:2,23:26:57:602,57,0	0/0:13,0:15:41.10:0,41,520	0/1:5,9:14:13.42:232,0,13	0/0:21,0:25:56.14:0,56,706	0/0:26,0:26:72.09:0,72,932	0/0:3,0:17:30.03:0,30,279	0/0:24,0:24:63.98:0,64,813	0/0:18,0:20:41.55:0,42,481	0/0:31,0:33:95.26:0,95,1264	1/1:2,15:18:35.78:332,36,0	0/0:26,1:30:42.06:0,42,790	0/0:24,0:25:69.19:0,69,937	0/0:21,0:24:68.66:0,69,860
chr10	9143152	.	TTC	T	937.77	PASS	AB=0.850;AC=15;AF=0.288;AN=52;BaseQRankSum=2.306;DP=666;FS=0.751;HRun=0;HaplotypeScore=143.9544;InbreedingCoeff=0.5118;MQ=66.43;MQ0=10;MQRankSum=1.259;QD=4.99;ReadPosRankSum=2.698;VQSLOD=3.1873;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:24,4:28:5.84:46,6,0	0/0:7,0:7:3.48:0,3,43	./.	./.	1/1:15,3:19:9.02:98,9,0	1/1:5,10:16:20.89:209,21,0	0/1:14,3:21:20.18:119,0,20	0/1:34,0:34:0:0,0,0	0/0:24,0:26:1.75:0,2,56	0/0:16,0:23:40.33:0,40,457	0/0:17,0:20:8.84:0,9,76	0/0:22,0:22:9:0,9,80	0/0:31,0:35:3:0,3,26	0/0:20,0:20:3.01:0,3,43	0/0:15,0:27:18:0,18,157	1/1:19,11:31:35.93:371,36,0	0/0:15,0:20:6.01:0,6,65	0/1:9,2:12:1.28:126,0,1	0/0:25,0:24:6.02:0,6,79	0/0:29,0:29:5.98:0,6,84	1/1:7,0:10:2.84:14,3,0	0/0:17,0:20:2.92:0,3,26	0/0:21,0:21:6.01:0,6,69	0/0:18,0:18:6.01:0,6,59	1/1:10,5:16:11.86:112,12,0	0/0:26,0:27:18.90:0,19,208	0/0:22,0:26:24.04:0,24,268	0/0:23,0:24:9.02:0,9,102
chr10	9144051	.	A	AAT	7875.73	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=8.249;DP=785;FS=1.060;HRun=0;HaplotypeScore=138.9034;InbreedingCoeff=0.9738;MQ=67.34;MQ0=1;MQRankSum=-0.556;QD=34.24;ReadPosRankSum=-2.401;VQSLOD=6.1623;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,22:27:42.14:691,42,0	0/0:13,0:13:36.12:0,36,463	0/0:14,0:13:11.95:0,12,152	0/0:20,0:16:11.03:0,11,133	1/1:8,30:38:7.14:1196,7,0	1/1:3,27:30:72.25:1200,72,0	1/1:2,12:14:36.12:585,36,0	1/1:19,24:43:96.27:1549,96,0	0/0:30,0:30:66.17:0,66,805	0/0:56,0:56:99:0,147,1820	0/0:38,0:38:99:0,108,1370	0/0:33,0:33:71.90:0,72,912	0/0:43,0:43:99:0,105,1317	0/0:28,0:28:63.19:0,63,797	0/0:36,0:36:90.26:0,90,1118	1/1:5,37:43:93.32:1569,93,0	0/0:16,0:16:42.13:0,42,527	1/1:4,12:18:35.08:578,35,0	0/0:15,0:15:39.12:0,39,489	0/0:32,0:32:78.23:0,78,977	0/0:23,0:23:66.18:0,66,820	0/0:27,0:27:72.23:0,72,926	0/0:34,0:34:93.30:0,93,1197	0/0:17,0:17:45.15:0,45,579	1/1:1,13:16:30.10:506,30,0	0/0:36,0:36:78.25:0,78,1004	0/0:33,0:33:87.28:0,87,1119	0/0:11,0:11:27.09:0,27,347
chr10	9144171	.	ATG	A	14242.85	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=13.054;DP=885;FS=9.063;HRun=0;HaplotypeScore=127.0637;InbreedingCoeff=0.9930;MQ=60.75;MQ0=11;MQRankSum=0.140;QD=31.44;ReadPosRankSum=4.986;VQSLOD=6.9073;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:21:48.11:0,48,754	1/1:1,12:13:30.10:412,30,0	0/0:52,0:14:14.05:0,14,238	0/0:69,0:15:13.11:0,13,139	0/0:42,0:42:99:0,114,1986	0/0:27,0:27:72.19:0,72,1181	0/0:17,0:17:45.11:0,45,711	0/0:47,0:47:99:0,132,2177	0/0:34,0:34:90.25:0,90,1475	1/1:7,32:39:96.22:1230,96,0	1/1:1,26:27:60.05:824,60,0	1/1:2,23:25:57.19:782,57,0	1/1:0,48:48:99:1522,111,0	1/1:2,35:37:96.32:1318,96,0	1/1:3,26:29:63.21:865,63,0	0/0:39,0:39:99:0,108,1853	1/1:1,13:14:27.09:371,27,0	0/0:16,0:16:36.12:0,36,623	1/1:2,19:20:48.10:607,48,0	1/1:4,36:39:87.29:1194,87,0	0/0:40,0:40:99:0,114,1828	1/1:1,17:18:42.14:576,42,0	1/1:5,28:33:69.23:947,69,0	1/1:1,12:13:21.07:288,21,0	0/0:27,0:27:78.19:0,78,1240	1/1:1,36:37:99:1400,105,0	1/1:4,42:46:99:1500,111,0	1/1:1,12:13:30.10:407,30,0
chr10	9145139	.	TC	T	21676.37	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-2.537;DP=647;FS=0.000;HRun=2;HaplotypeScore=66.6074;InbreedingCoeff=0.9446;MQ=82.79;MQ0=0;MQRankSum=-9.512;QD=35.54;ReadPosRankSum=5.373;VQSLOD=4.9805;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,41:43:99:1441,111,0	1/1:0,7:7:17.96:234,18,0	0/0:21,0:21:63.19:0,63,922	0/0:16,0:16:45.01:0,45,589	1/1:0,25:25:69.22:896,69,0	1/1:2,17:19:45.15:584,45,0	1/1:1,16:17:48.16:623,48,0	1/1:2,27:29:81.25:1038,81,0	1/1:1,22:23:60.19:779,60,0	1/1:0,25:25:75.23:956,75,0	1/1:0,18:18:48.16:623,48,0	1/1:0,25:25:69.22:896,69,0	1/1:0,31:31:87.28:1129,87,0	1/1:0,27:27:75.24:974,75,0	1/1:0,24:24:69.22:896,69,0	1/1:1,29:30:81.26:1052,81,0	1/1:1,31:32:90.29:1169,90,0	1/1:1,16:17:42.14:545,42,0	1/1:1,20:21:60.18:764,60,0	1/1:0,20:20:57.19:740,57,0	1/1:0,32:32:81.26:1052,81,0	1/1:0,18:18:48.16:623,48,0	1/1:0,26:26:72.23:935,72,0	1/1:0,28:28:75.24:974,75,0	1/1:0,28:28:81.26:1052,81,0	1/1:1,27:28:81.25:1038,81,0	1/1:0,15:15:45.15:584,45,0	1/1:0,2:2:6.02:78,6,0
chr10	9148060	.	TAC	T	391.40	PASS	AB=0.933;AC=14;AF=0.292;AN=48;BaseQRankSum=4.194;DP=454;FS=3.016;HRun=0;HaplotypeScore=135.3065;InbreedingCoeff=0.5398;MQ=29.54;MQ0=71;MQRankSum=-0.442;QD=2.70;ReadPosRankSum=-0.278;VQSLOD=2.7636;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:16:2.96:19,3,0	0/0:9,0:9:4.15:0,4,19	./.	./.	1/1:20,0:19:23.44:142,23,0	1/1:10,0:7:5.91:37,6,0	1/1:14,0:10:5.92:38,6,0	0/1:22,4:24:3.11:69,0,3	./.	0/0:20,0:18:20.89:0,21,134	0/0:25,0:23:16.24:0,16,83	0/0:13,0:12:3.49:0,3,8	0/0:13,0:11:5.88:0,6,36	0/0:13,0:13:4.70:0,5,21	0/0:18,0:17:7.71:0,8,29	1/1:14,0:12:8.87:56,9,0	0/0:14,0:9:1.25:0,1,4	./.	0/0:9,0:8:14.89:0,15,112	0/0:36,0:35:7.21:0,7,37	0/0:11,0:5:0:0,0,0	0/0:22,0:21:6.30:0,6,34	0/0:26,0:26:12.28:0,12,57	0/1:10,0:8:11.01:15,0,11	1/1:29,0:29:26.48:167,26,0	0/0:24,0:22:39.33:0,39,220	0/0:13,0:10:10.63:0,11,48	0/0:6,0:5:2.80:0,3,7
chr10	9148094	.	CACAGAGAGAGAG	C	4624.36	PASS	AB=1.000;AC=27;AF=0.482;AN=56;BaseQRankSum=0.618;DP=447;FS=1.639;HRun=0;HaplotypeScore=173.3115;InbreedingCoeff=0.1215;MQ=39.35;MQ0=34;MQRankSum=-3.674;QD=15.89;ReadPosRankSum=3.730;VQSLOD=4.0041;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:14,8:19:3.01:39,3,0	0/1:7,0:7:23.46:23,0,50	0/0:28,0:11:22.01:0,22,873	0/0:25,0:8:21.07:0,21,1034	1/1:14,11:25:23.87:809,24,0	1/1:2,4:5:6.02:231,6,0	1/1:6,9:13:12.04:344,12,0	1/1:11,0:9:5.87:324,6,0	0/0:10,0:10:12.04:0,12,456	0/1:18,0:16:79.76:472,0,80	0/1:20,0:18:57.90:58,0,125	0/1:8,0:8:1.36:1,0,44	0/1:10,0:9:70.72:75,0,71	0/1:18,0:18:72.84:73,0,78	0/1:15,0:14:7.56:98,0,8	1/1:2,6:8:9.03:346,9,0	0/1:18,0:16:3.29:114,0,3	1/1:5,0:4:3.80:94,4,0	0/1:13,0:8:99:157,0,101	0/0:27,0:27:7.37:0,7,82	0/0:11,0:6:0.47:0,0,1	0/0:18,0:16:9:0,9,98	0/1:26,0:26:3.65:4,0,171	0/0:13,0:12:6.02:0,6,85	1/1:11,19:30:29.67:1050,30,0	0/0:20,0:19:5.87:0,6,282	0/1:16,0:14:95.01:313,0,95	0/0:4,0:4:5.83:0,6,33
chr10	9148097	.	AGAGAGAGAGAGAGAAAT	A	820.65	PASS	AB=0.966;AC=20;AF=0.357;AN=56;BaseQRankSum=2.316;DP=390;FS=44.894;HRun=0;HaplotypeScore=191.2185;InbreedingCoeff=-0.1793;MQ=48.35;MQ0=28;MQRankSum=-2.254;QD=3.58;ReadPosRankSum=4.081;VQSLOD=1.4903;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:13:18.05:0,18,210	0/1:6,0:6:0.95:1,0,248	0/0:32,0:14:42.13:0,42,2014	0/0:29,0:12:31.05:0,31,2074	0/1:23,0:23:91.63:92,0,392	1/1:4,0:4:5.92:39,6,0	0/1:13,0:12:22.64:23,0,71	0/0:10,0:8:1.84:0,2,11	0/0:11,0:11:21.07:0,21,1213	0/1:16,0:15:38.30:70,0,38	0/1:17,0:16:40.62:41,0,98	0/0:7,0:7:15.03:0,15,299	0/1:8,0:7:37.42:37,0,58	0/0:16,0:16:13.60:0,14,264	0/0:15,0:14:11.04:0,11,250	0/1:7,0:7:42.94:43,0,61	0/0:14,0:12:19.56:0,20,246	1/1:4,0:4:2.92:9,3,0	1/1:7,4:7:14.07:176,14,0	0/1:21,0:21:26.66:27,0,403	0/0:11,0:6:3.48:0,3,37	0/1:9,4:12:53.42:53,0,232	0/1:18,3:21:53.44:53,0,621	0/1:11,0:10:21.80:22,0,156	0/1:26,0:26:99:118,0,274	0/1:12,0:12:99:125,0,218	0/1:14,0:13:54.78:55,0,342	0/0:2,0:2:6.02:0,6,142
chr10	9148101	.	AGAGAGAGAG	A	4456.62	PASS	AB=0.780;AC=41;AF=0.732;AN=56;BaseQRankSum=2.192;DP=346;FS=40.931;HRun=0;HaplotypeScore=138.1438;InbreedingCoeff=0.2650;MQ=55.76;MQ0=20;MQRankSum=-4.800;QD=17.21;ReadPosRankSum=0.045;VQSLOD=2.6711;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,5:13:17.06:107,17,0	0/1:4,2:6:23.55:24,0,25	0/0:35,0:17:51.15:0,51,1707	0/0:28,0:13:36.12:0,36,1506	1/1:12,10:22:34.91:528,35,0	1/1:4,0:4:6.02:129,6,0	1/1:9,1:11:15.01:257,15,0	1/1:3,3:4:9.03:200,9,0	0/0:12,0:12:18.06:0,18,749	1/1:6,5:13:16.71:557,17,0	1/1:8,3:13:19.79:246,20,0	1/1:5,1:6:4.11:25,4,0	0/1:3,2:6:12.50:89,0,13	0/1:6,6:12:11.28:109,0,11	1/1:5,4:12:26.89:346,27,0	1/1:6,1:7:14.97:235,15,0	1/1:6,4:9:15.91:161,16,0	1/1:0,1:1:3.01:71,3,0	1/1:7,2:6:9.65:146,10,0	0/1:13,1:16:10.57:28,0,11	1/1:6,1:3:2.47:19,2,0	0/1:10,3:12:3.93:81,0,4	0/1:11,6:18:14.81:70,0,15	0/0:7,5:11:5.85:0,6,44	1/1:19,5:25:32.28:607,32,0	0/1:10,0:10:7.83:18,0,8	1/1:8,4:11:18.08:327,18,0	1/1:3,0:3:3:77,3,0
chr10	9148103	.	AGAGAGAG	A	4127.51	PASS	AB=0.929;AC=48;AF=0.857;AN=56;BaseQRankSum=5.534;DP=340;FS=57.918;HRun=0;HaplotypeScore=131.3783;InbreedingCoeff=0.5139;MQ=59.56;MQ0=15;MQRankSum=-5.575;QD=15.58;ReadPosRankSum=1.509;VQSLOD=1.0549;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:13:14.84:101,15,0	0/1:5,0:6:13.84:33,0,14	0/0:35,0:17:51.14:0,51,1426	0/0:29,0:15:42.14:0,42,1371	1/1:22,0:22:32.70:424,33,0	1/1:4,0:4:6.02:101,6,0	1/1:10,1:11:15.01:216,15,0	1/1:5,0:3:9.03:169,9,0	0/0:11,0:11:18.06:0,18,625	1/1:10,2:12:7.93:404,8,0	1/1:10,4:12:18.82:201,19,0	1/1:6,0:6:13.08:54,13,0	1/1:4,1:6:3.46:83,3,0	1/1:10,0:10:8.64:118,9,0	1/1:9,4:14:14.05:334,14,0	1/1:7,0:7:14.96:193,15,0	1/1:10,0:11:14.09:124,14,0	1/1:1,0:1:3.01:58,3,0	1/1:9,0:6:11.12:133,11,0	1/1:9,2:14:13.07:103,13,0	1/1:4,0:2:2.97:20,3,0	1/1:13,0:12:16.40:112,16,0	1/1:16,1:18:13.55:119,14,0	0/1:14,0:13:12.24:12,0,16	1/1:24,1:25:30.06:477,30,0	1/1:10,0:11:15.24:103,15,0	1/1:9,1:11:33.40:355,33,0	1/1:3,0:3:7.75:81,8,0
chr10	9148264	.	AAGAC	A	16676.26	PASS	AB=1.000;AC=49;AF=0.875;AN=56;BaseQRankSum=2.599;DP=652;FS=0.000;HRun=0;HaplotypeScore=127.2128;InbreedingCoeff=0.8276;MQ=60.76;MQ0=3;MQRankSum=-0.857;QD=28.26;ReadPosRankSum=2.888;VQSLOD=4.8683;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,22:29:39.08:613,39,0	1/1:4,7:11:15.05:248,15,0	0/0:32,0:22:21.21:0,21,653	0/1:31,0:22:20.23:20,0,277	1/1:4,21:25:51.17:825,51,0	1/1:1,21:22:42.14:691,42,0	1/1:7,12:19:24.08:394,24,0	1/1:16,19:35:48.03:629,48,0	0/0:12,0:12:30.10:0,30,726	1/1:2,26:28:78.25:1238,78,0	1/1:2,19:21:45.15:734,45,0	1/1:1,24:25:48.16:790,48,0	1/1:7,15:22:29.99:494,30,0	1/1:4,20:24:45.15:739,45,0	1/1:11,23:34:48.16:792,48,0	1/1:3,25:28:57.19:938,57,0	1/1:9,25:34:53.39:849,53,0	1/1:8,20:28:51.17:840,51,0	1/1:5,12:17:36.12:588,36,0	1/1:2,15:17:39.13:635,39,0	0/0:4,0:18:18.06:0,18,316	1/1:2,11:13:30.10:492,30,0	1/1:1,19:20:42.10:663,42,0	1/1:7,13:20:33.11:542,33,0	1/1:4,17:21:45.15:742,45,0	1/1:9,18:27:51.15:793,51,0	1/1:5,25:30:63.22:1040,63,0	1/1:2,7:9:21.07:346,21,0
chr10	9148652	.	C	CA	13329.34	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-15.975;DP=641;FS=0.637;HRun=5;HaplotypeScore=60.2287;InbreedingCoeff=0.9727;MQ=81.20;MQ0=0;MQRankSum=-1.897;QD=33.83;ReadPosRankSum=3.118;VQSLOD=5.1969;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,117,1257	1/1:1,3:4:6.02:79,6,0	0/0:13,0:14:10.77:0,11,323	0/0:17,0:18:15.32:0,15,375	0/0:20,0:20:60.15:0,60,645	0/0:13,0:13:33.08:0,33,355	0/0:22,0:22:66.15:0,66,701	0/0:37,0:37:90.22:0,90,967	0/0:27,0:27:78.20:0,78,838	1/1:3,24:27:72.23:947,72,0	1/1:4,23:27:69.22:907,69,0	1/1:0,24:24:69.22:908,69,0	1/1:2,19:21:54.01:710,54,0	1/1:4,29:33:75.24:987,75,0	1/1:0,13:13:39.13:513,39,0	0/0:23,0:23:63.16:0,63,677	1/1:2,28:30:78.25:1026,78,0	0/0:15,0:15:42.10:0,42,451	1/1:3,20:23:60.14:755,60,0	1/1:2,26:28:75.24:987,75,0	1/1:6,27:33:78.25:1025,78,0	1/1:0,17:17:45.15:592,45,0	1/1:1,22:23:60.20:790,60,0	1/1:2,22:24:66.21:869,66,0	0/0:16,0:16:45.11:0,45,484	1/1:3,21:24:63.19:812,63,0	1/1:2,35:37:96.31:1263,96,0	1/1:2,4:6:12.04:158,12,0
chr10	9148914	.	C	CT	3867.68	PASS	AB=0.734;AC=17;AF=0.304;AN=56;BaseQRankSum=-4.977;DP=515;FS=1.691;HRun=10;HaplotypeScore=76.7004;InbreedingCoeff=0.7344;MQ=70.62;MQ0=0;MQRankSum=1.315;QD=21.02;ReadPosRankSum=-1.206;VQSLOD=4.1181;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,20:24:61.40:643,61,0	0/0:9,0:10:20:0,20,154	0/1:8,0:9:3.66:4,0,45	0/0:7,0:7:8.01:0,8,54	1/1:3,26:29:77.99:802,78,0	1/1:4,17:21:48.12:512,48,0	0/1:4,9:13:12.81:279,0,13	1/1:17,23:39:39.33:641,39,0	0/0:20,0:20:50.92:0,51,417	0/0:24,0:26:66.98:0,67,529	0/0:24,2:26:4.94:0,5,450	0/0:16,0:16:44.93:0,45,369	0/0:15,0:16:40.99:0,41,326	0/0:18,0:18:27.26:0,27,343	0/0:18,0:18:9.93:0,10,286	1/1:3,10:13:21.02:213,21,0	0/0:12,0:13:29:0,29,228	1/1:1,8:9:24.06:256,24,0	0/0:13,0:13:29.95:0,30,244	0/0:27,0:27:43.21:0,43,557	0/1:4,7:11:49.79:136,0,50	0/0:19,1:21:30.09:0,30,442	0/0:22,0:22:47.88:0,48,391	0/0:6,0:7:17.02:0,17,129	1/1:1,13:14:36.09:384,36,0	0/0:31,1:34:29.62:0,30,568	0/0:23,0:23:53.92:0,54,443	0/0:14,0:14:29.95:0,30,246
chr10	9150469	.	G	GAGCTA	16391.47	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-15.660;DP=817;FS=5.199;HRun=0;HaplotypeScore=139.7174;InbreedingCoeff=0.9937;MQ=76.65;MQ0=0;MQRankSum=-8.937;QD=62.80;ReadPosRankSum=0.069;VQSLOD=5.6101;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,49:60:99:3891,129,0	0/0:13,0:13:36.10:0,36,665	0/0:22,0:22:56.86:0,57,1068	0/0:14,0:14:36.10:0,36,664	1/1:8,23:34:73.49:2127,73,0	1/1:1,16:17:45.15:1372,45,0	1/1:4,22:36:63.22:1914,63,0	1/1:9,20:33:72.23:2027,72,0	0/0:29,0:29:81.28:0,81,1636	0/0:30,0:30:81.28:0,81,1631	0/0:23,0:23:69.24:0,69,1395	0/0:34,0:34:96.32:0,96,1918	0/0:25,0:25:72.22:0,72,1390	0/0:37,0:37:90.31:0,90,1803	0/0:46,0:46:99:0,129,2598	1/1:4,25:32:13.74:2134,14,0	0/0:29,0:29:75.26:0,75,1519	1/1:3,19:23:51.18:1555,51,0	0/0:24,0:24:60.15:0,60,1042	0/0:22,0:22:57.20:0,57,1169	0/0:45,0:45:99:0,126,2558	0/0:32,0:32:87.28:0,87,1722	0/0:25,0:25:60.14:0,60,1110	0/0:32,0:32:96.27:0,96,1855	1/1:6,16:26:45.15:1371,45,0	0/0:38,0:38:99:0,105,2103	0/0:31,0:31:84.29:0,84,1684	0/0:5,0:5:15.05:0,15,307
chr10	9151076	.	T	TG	8458.74	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=18.037;DP=751;FS=25.751;HRun=1;HaplotypeScore=89.9948;InbreedingCoeff=0.9949;MQ=88.49;MQ0=0;MQRankSum=-1.619;QD=37.76;ReadPosRankSum=-1.184;VQSLOD=2.6341;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,30:31:84.28:1179,84,0	0/0:20,0:20:60.18:0,60,806	0/0:29,0:29:84.23:0,84,1112	0/0:28,0:28:78.24:0,78,1056	1/1:1,30:31:81.26:1135,81,0	1/1:0,33:33:93.31:1322,93,0	1/1:3,30:33:72.24:1015,72,0	1/1:1,34:35:99:1387,99,0	0/0:21,0:21:63.19:0,63,863	0/0:47,0:47:99:0,132,1832	0/0:24,0:24:72.24:0,72,1007	0/0:32,0:32:93.31:0,93,1292	0/0:30,0:30:87.28:0,87,1196	0/0:29,0:29:87.28:0,87,1200	0/0:37,0:37:99:0,108,1453	1/1:1,17:18:45.15:624,45,0	0/0:25,0:25:63.18:0,63,843	1/1:0,21:21:63.21:884,63,0	0/0:23,0:23:69.17:0,69,920	0/0:28,0:28:84.27:0,84,1158	0/0:18,0:18:51.17:0,51,710	0/0:24,0:24:72.24:0,72,1004	0/0:30,0:30:90.25:0,90,1211	0/0:19,0:19:50.85:0,51,713	1/1:2,20:22:66.19:913,66,0	0/0:29,0:29:87.26:0,87,1182	0/0:30,0:30:90.28:0,90,1237	0/0:4,0:4:12.04:0,12,168
chr10	9151246	.	T	TCGG	28386.01	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=8.141;DP=689;FS=6.140;HRun=0;HaplotypeScore=152.7879;InbreedingCoeff=0.9761;MQ=81.06;MQ0=0;MQRankSum=-9.196;QD=45.35;ReadPosRankSum=5.681;VQSLOD=5.9606;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:29:79.97:586,80,0	1/1:0,10:10:27.09:570,27,0	0/0:22,0:22:66.18:0,66,1147	0/0:20,0:20:54.18:0,54,979	1/1:26,0:26:17.65:393,18,0	1/1:29,0:29:36.01:503,36,0	1/1:30,0:30:86.24:736,86,0	1/1:27,0:27:48.07:535,48,0	0/0:21,0:21:63.22:0,63,1174	1/1:0,22:22:66.21:1412,66,0	1/1:0,15:16:42.14:928,42,0	1/1:0,18:19:57.20:1227,57,0	1/1:0,33:35:93.32:2043,93,0	1/1:0,28:29:75.26:1648,75,0	1/1:1,33:34:99:2155,99,0	1/1:25,0:25:71.95:549,72,0	1/1:0,27:32:72.25:1575,72,0	1/1:15,0:15:41.39:291,41,0	1/1:0,11:14:42.09:829,42,0	1/1:0,33:33:99:2191,99,0	1/1:1,16:18:45.15:995,45,0	1/1:0,19:21:51.17:1123,51,0	1/1:0,26:27:69.24:1502,69,0	1/1:0,27:28:66.23:1418,66,0	1/1:34,0:33:71.78:663,72,0	1/1:0,34:35:99:2233,102,0	1/1:2,32:34:96.31:2082,96,0	1/1:0,4:4:9.03:197,9,0
chr10	9151247	.	T	TGGG	41042.27	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=2.328;DP=720;FS=2.318;HRun=1;HaplotypeScore=117.5530;InbreedingCoeff=0.9792;MQ=79.94;MQ0=0;MQRankSum=-9.224;QD=62.66;ReadPosRankSum=4.008;VQSLOD=5.2653;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,30:33:84.29:1984,84,0	1/1:9,0:9:27.05:579,27,0	0/0:23,0:23:63.21:0,63,1057	0/0:20,0:20:54.18:0,54,935	1/1:3,22:26:60.16:1360,60,0	1/1:7,25:35:78.24:1762,78,0	1/1:2,33:35:90.31:2125,90,0	1/1:11,21:35:99:2226,99,0	0/0:22,0:22:63.22:0,63,1112	1/1:23,0:23:63.22:1450,63,0	1/1:15,0:15:45.15:1037,45,0	1/1:19,0:20:60.21:1376,60,0	1/1:35,0:35:99:2262,102,0	1/1:29,0:29:84.29:1906,84,0	1/1:34,0:34:99:2331,102,0	1/1:2,24:26:78.27:1811,78,0	1/1:32,0:32:75.26:1740,75,0	1/1:2,14:16:45.15:1032,45,0	1/1:17,0:17:48.16:1056,48,0	1/1:34,0:34:99:2306,99,0	1/1:17,0:17:51.16:1146,51,0	1/1:20,0:20:51.18:1190,51,0	1/1:26,0:26:69.24:1610,69,0	1/1:27,0:27:66.23:1544,66,0	1/1:5,32:37:99:2323,99,0	1/1:36,0:37:99:2499,108,0	1/1:33,0:33:96.31:2178,96,0	1/1:3,0:3:9.03:210,9,0
chr10	9151368	.	GTT	G	19993.92	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-4.649;DP=719;FS=2.699;HRun=9;HaplotypeScore=96.5983;InbreedingCoeff=0.9973;MQ=74.71;MQ0=2;MQRankSum=-8.294;QD=29.10;ReadPosRankSum=5.611;VQSLOD=4.9876;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,28:29:81.24:944,81,0	1/1:2,20:22:51.15:592,51,0	0/0:17,0:17:44.84:0,45,617	0/0:15,0:15:26.94:0,27,330	1/1:5,45:50:99:1468,126,0	1/1:0,17:17:51.15:594,51,0	1/1:2,13:15:39.11:454,39,0	1/1:4,26:30:81.20:930,81,0	1/1:1,22:23:54.16:629,54,0	1/1:3,30:33:90.26:1048,90,0	1/1:3,24:27:66.18:763,66,0	1/1:1,20:21:54.16:629,54,0	1/1:2,32:34:84.24:979,84,0	1/1:3,20:23:41.91:489,42,0	1/1:2,27:29:75.22:873,75,0	1/1:2,26:28:66.19:769,66,0	1/1:2,21:23:66.19:769,66,0	1/1:3,17:19:42.11:489,42,0	1/1:2,17:19:51.13:584,51,0	1/1:3,26:29:69.18:804,69,0	1/1:1,20:21:51.15:594,51,0	1/1:4,32:36:87.24:1014,87,0	1/1:4,27:31:72.20:839,72,0	1/1:2,18:20:45.13:524,45,0	1/1:2,31:33:87.25:1014,87,0	1/1:4,22:27:68.91:769,69,0	1/1:2,37:39:99:1188,102,0	1/1:0,8:7:21.06:245,21,0
chr10	9153313	.	GCA	G	1287.03	PASS	AB=0.792;AC=36;AF=0.783;AN=46;BaseQRankSum=1.179;DP=436;FS=14.143;HRun=0;HaplotypeScore=107.5013;InbreedingCoeff=0.4145;MQ=60.46;MQ0=9;MQRankSum=0.605;QD=4.42;ReadPosRankSum=2.695;VQSLOD=1.9752;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	1/1:6,3:9:3.01:32,3,0	./.	./.	0/1:13,0:20:0:1,0,0	1/1:12,0:13:2.84:14,3,0	./.	./.	1/1:7,0:14:8.52:42,9,0	0/0:14,0:14:16.20:0,16,138	0/0:5,0:8:9.01:0,9,95	1/1:5,4:9:6.02:64,6,0	1/1:9,9:19:15.04:161,15,0	1/1:7,3:11:12.33:110,12,0	0/0:9,0:11:8.75:0,9,81	1/1:6,0:11:11.36:56,11,0	1/1:16,3:21:8.86:115,9,0	0/1:12,0:15:8.21:8,0,11	1/1:5,1:6:3.01:32,3,0	1/1:4,4:8:3:32,3,0	0/1:11,0:16:0:0,0,0	1/1:3,0:6:2.84:14,3,0	1/1:7,1:12:5.85:46,6,0	1/1:17,10:29:26.73:253,27,0	1/1:13,0:24:23.20:112,23,0	0/1:12,0:14:33.90:37,0,34	1/1:8,9:17:18:181,18,0	1/1:6,4:11:11.86:110,12,0
chr10	9153431	.	G	GAAATA	7545.77	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-7.862;DP=363;FS=1.526;HRun=0;HaplotypeScore=72.9160;InbreedingCoeff=0.9644;MQ=63.66;MQ0=0;MQRankSum=-2.983;QD=60.37;ReadPosRankSum=1.984;VQSLOD=5.3559;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,9:15:21.07:545,21,0	0/0:10,0:10:21.06:0,21,387	0/0:13,0:12:36.04:0,36,629	0/0:7,0:7:17.69:0,18,272	1/1:7,18:27:54.18:1530,54,0	1/1:4,10:14:30.10:849,30,0	1/1:2,2:4:9.03:255,9,0	1/1:3,9:13:33.11:947,33,0	0/0:11,0:11:33.11:0,33,636	0/0:12,0:12:36.12:0,36,711	0/0:17,0:17:48.15:0,48,930	0/0:10,0:10:24.08:0,24,483	0/0:13,0:13:36.12:0,36,725	0/0:7,0:7:9.03:0,9,168	0/0:8,0:8:18.06:0,18,350	1/1:2,10:15:30.05:890,30,0	0/0:28,0:28:75.24:0,75,1451	1/1:5,15:21:45.15:1356,45,0	0/0:13,0:13:36.12:0,36,683	0/0:18,0:18:45.15:0,45,906	0/0:8,0:8:24.07:0,24,447	0/0:3,0:3:9.03:0,9,181	0/0:6,0:6:18.06:0,18,362	0/0:16,0:16:42.08:0,42,742	1/1:2,13:16:39.13:1175,39,0	0/0:13,0:13:39.13:0,39,761	0/0:14,0:14:39.10:0,39,712	0/0:11,0:11:30.10:0,30,604
chr10	9153747	.	CTGGTT	C	16811.93	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=-5.836;DP=636;FS=0.963;HRun=0;HaplotypeScore=162.3032;InbreedingCoeff=0.9914;MQ=78.43;MQ0=0;MQRankSum=-12.061;QD=58.99;ReadPosRankSum=3.936;VQSLOD=5.5894;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,148,4701	1/1:0,8:8:21.07:489,21,0	0/0:19,0:19:13.12:0,13,1382	0/0:19,0:19:39.36:0,39,882	0/0:26,0:26:66.23:0,66,2177	0/0:25,0:25:69.24:0,69,2298	0/0:40,0:40:99:0,120,3883	0/0:33,0:33:99:0,99,3249	0/0:18,0:18:54.19:0,54,1754	1/1:0,14:14:42.07:880,42,0	1/1:0,15:15:30.10:698,30,0	1/1:0,24:23:60.21:1398,60,0	1/1:0,27:27:72.25:1674,72,0	1/1:0,26:26:57.20:1326,57,0	1/1:0,30:30:78.27:1817,78,0	0/0:29,0:29:87.30:0,87,2870	1/1:0,21:21:57.20:1328,57,0	0/0:26,0:26:78.27:0,78,2569	1/1:0,18:18:54.19:1250,54,0	1/1:0,15:15:39.13:906,39,0	0/0:49,0:49:99:0,144,4746	1/1:0,10:10:27.05:578,27,0	1/1:0,4:4:12.04:277,12,0	1/1:0,23:23:42.19:979,42,0	0/0:16,0:16:48.16:0,48,1536	1/1:0,21:21:63.22:1399,63,0	1/1:0,19:19:48.16:1114,48,0	1/1:0,10:10:30.10:699,30,0
chr10	9154138	.	TGG	T	2739.47	PASS	AB=0.783;AC=22;AF=0.393;AN=56;BaseQRankSum=-1.633;DP=452;FS=14.847;HRun=12;HaplotypeScore=64.7755;InbreedingCoeff=0.6980;MQ=68.25;MQ0=2;MQRankSum=0.943;QD=11.96;ReadPosRankSum=4.127;VQSLOD=0.5819;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,20:29:45.04:458,45,0	0/0:5,0:5:5.96:0,6,44	0/0:9,0:7:9.22:0,9,109	0/0:8,0:8:11.98:0,12,118	1/1:7,8:16:23.77:225,24,0	1/1:7,9:16:24.02:244,24,0	1/1:8,9:21:35.72:310,36,0	1/1:9,11:21:26.77:273,27,0	1/1:6,8:13:21.03:213,21,0	0/0:11,0:17:12.95:0,13,45	0/0:6,0:12:9.86:0,10,35	0/0:23,0:23:34.54:0,35,372	0/0:15,0:15:12.03:0,12,153	0/0:17,0:17:15.05:0,15,221	0/1:8,2:21:24.08:24,0,91	1/1:4,13:17:36.08:366,36,0	0/0:36,0:38:63.12:0,63,834	1/1:2,17:20:36.28:419,36,0	0/1:17,0:18:3.72:4,0,115	1/1:9,1:10:5.71:58,6,0	0/0:9,0:18:14.97:0,15,53	0/0:13,0:13:3:0,3,26	0/0:7,0:8:5.50:0,6,31	0/0:5,0:5:6.02:0,6,90	1/1:11,14:26:35.79:347,36,0	0/0:8,0:8:3.01:0,3,45	0/0:21,0:22:23.54:0,24,268	0/0:5,0:5:0.41:0,0,39
chr10	9154149	.	GGC	G	715.71	PASS	AB=0.982;AC=17;AF=0.304;AN=56;BaseQRankSum=7.909;DP=336;FS=34.062;HRun=0;HaplotypeScore=59.4642;InbreedingCoeff=0.2799;MQ=75.62;MQ0=2;MQRankSum=0.513;QD=4.11;ReadPosRankSum=7.553;VQSLOD=0.4346;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:31,0:31:74.96:75,0,127	0/0:5,0:5:12:0,12,117	0/1:9,0:7:4.97:5,0,74	0/0:11,0:11:4.32:0,4,121	1/1:10,0:10:7.71:110,8,0	0/1:12,0:12:28.79:50,0,29	0/1:18,1:19:45.26:45,0,87	0/1:15,0:15:30.18:70,0,30	1/1:10,0:9:5.41:61,5,0	0/0:10,0:10:23.19:0,23,146	0/0:7,0:7:14.49:0,14,80	0/0:15,0:15:26.96:0,27,361	0/0:5,0:5:14.94:0,15,197	0/0:9,0:9:18.05:0,18,264	0/0:21,0:21:1.78:0,2,166	0/1:15,0:15:7.73:65,0,8	0/0:26,0:26:63.06:0,63,925	1/1:19,0:19:10.37:161,10,0	0/1:11,1:12:9.47:9,0,222	1/1:4,1:5:5.59:51,6,0	0/0:14,0:14:25.18:0,25,128	0/0:4,0:4:2.98:0,3,21	0/0:6,0:6:11.78:0,12,93	0/0:3,0:3:6.02:0,6,96	1/1:16,1:17:18.26:183,18,0	0/0:6,0:6:14.87:0,15,133	0/0:16,0:15:40.88:0,41,420	0/0:4,0:4:11.87:0,12,106
chr10	9154767	.	A	AAATCAGTCATGGC	78811.41	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-8.652;DP=800;FS=6.896;HRun=0;HaplotypeScore=200.4398;InbreedingCoeff=0.9892;MQ=74.68;MQ0=1;MQRankSum=-15.719;QD=115.90;ReadPosRankSum=2.225;VQSLOD=4.0844;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,16:38:60.21:3953,60,0	1/1:4,2:13:14.88:831,15,0	0/0:25,0:25:72.20:0,72,2552	0/0:32,0:31:87.29:0,87,2976	1/1:6,13:26:35.91:2338,36,0	1/1:5,14:26:54.19:3572,54,0	1/1:9,19:37:84.28:5071,84,0	1/1:12,5:39:99:5946,117,0	0/0:24,0:24:72.25:0,72,2800	1/1:13,5:33:72.21:3389,72,0	1/1:12,6:29:42.10:2376,42,0	1/1:6,22:40:81.27:4863,81,0	1/1:9,23:39:93.32:5706,93,0	1/1:10,13:33:63.21:3674,63,0	1/1:8,22:39:81.27:4793,81,0	1/1:6,14:26:60.20:3648,60,0	1/1:8,8:27:48.16:3185,48,0	1/1:3,5:17:24.08:1603,24,0	1/1:3,5:24:72.17:3404,72,0	1/1:5,12:28:57.07:3186,57,0	0/0:39,0:39:99:0,114,4211	1/1:3,5:26:21.07:1400,21,0	1/1:7,8:24:39.13:2586,39,0	1/1:8,7:25:35.85:2220,36,0	1/1:5,6:26:33.11:2013,33,0	1/1:5,19:38:96.31:5415,96,0	1/1:5,10:21:45.62:2636,46,0	1/1:0,5:5:15.05:1002,15,0
chr10	9157237	.	ATT	A	10262.03	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-17.092;DP=977;FS=1.948;HRun=3;HaplotypeScore=304.1128;InbreedingCoeff=0.9998;MQ=52.01;MQ0=3;MQRankSum=9.691;QD=36.78;ReadPosRankSum=5.392;VQSLOD=3.5596;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,44:46:99:1883,123,0	0/0:12,0:12:33.11:0,33,629	0/0:33,0:26:75.09:0,75,1361	0/0:39,0:26:75.19:0,75,1357	1/1:0,27:27:34.31:548,34,0	1/1:0,18:18:45.15:689,45,0	1/1:0,39:39:99:1562,102,0	1/1:1,31:32:84.16:1227,84,0	0/0:44,0:44:99:0,119,2095	0/0:49,0:49:99:0,144,2562	0/0:20,0:20:53.95:0,54,727	0/0:47,0:47:99:0,132,2364	0/0:55,0:55:99:0,156,2659	0/0:43,0:43:99:0,114,1840	0/0:55,0:55:99:0,153,2692	1/1:2,55:57:99:2251,147,0	0/0:27,0:27:69.46:0,69,1172	1/1:2,27:29:62.22:1046,62,0	0/0:20,0:20:57.20:0,57,1101	0/0:29,0:29:81.76:0,82,1046	0/0:48,0:48:99:0,123,1709	0/0:28,0:28:83.60:0,84,1307	0/0:26,0:26:71.68:0,72,1058	0/0:38,0:38:79.31:0,79,1193	1/1:0,30:30:69.23:1056,69,0	0/0:44,0:44:99:0,132,2385	0/0:32,0:31:95.34:0,95,1577	0/0:9,0:9:27.09:0,27,506
chr10	9157261	.	GTCCATCCA	G	8396.91	PASS	AB=1.000;AC=33;AF=0.589;AN=56;BaseQRankSum=-2.243;DP=990;FS=0.000;HRun=0;HaplotypeScore=370.5194;InbreedingCoeff=0.8484;MQ=51.02;MQ0=14;MQRankSum=-6.711;QD=15.13;ReadPosRankSum=1.411;VQSLOD=1.9910;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:45:90.29:0,90,3405	1/1:2,9:11:5.89:154,6,0	0/1:25,0:12:2.97:3,0,93	0/0:44,0:22:20.47:0,20,486	0/0:26,0:26:33.86:0,34,888	0/0:23,0:23:42.13:0,42,1366	0/0:44,0:44:87.21:0,87,2803	0/0:33,0:32:39.13:0,39,1067	0/0:17,0:50:63.20:0,63,1714	1/1:23,25:47:72.25:1611,72,0	1/1:6,17:23:2.79:76,3,0	1/1:18,29:47:18.06:460,18,0	1/1:17,35:52:32.98:843,33,0	1/1:10,27:37:6.02:153,6,0	1/1:18,44:62:18.06:460,18,0	0/0:51,0:51:99:0,108,3846	1/1:9,17:26:21.07:537,21,0	0/0:32,0:31:50.38:0,50,1638	1/1:18,8:24:21.07:346,21,0	1/1:7,17:24:9.01:191,9,0	0/0:51,0:52:67.11:0,67,1610	1/1:6,25:31:6.49:154,6,0	1/1:5,19:24:6.02:153,6,0	1/1:23,10:33:11.24:220,11,0	0/0:35,0:35:78.20:0,78,2942	1/1:17,27:44:87.30:1897,87,0	1/1:8,24:32:33.09:830,33,0	1/1:3,7:10:12.04:307,12,0
chr10	9157533	.	A	ATTTTTTTTTG	55768.16	PASS	AB=1.000;AC=49;AF=0.875;AN=56;BaseQRankSum=3.190;DP=728;FS=0.000;HRun=0;HaplotypeScore=243.6820;InbreedingCoeff=0.8525;MQ=60.84;MQ0=0;MQRankSum=-11.659;QD=82.87;ReadPosRankSum=-0.615;VQSLOD=4.1590;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,8:30:54.18:2222,54,0	1/1:6,0:15:24.08:876,24,0	0/0:10,0:10:8.79:0,9,441	0/1:16,0:16:4.63:5,0,449	1/1:23,12:36:69.24:2850,69,0	1/1:10,15:27:60.21:2960,60,0	1/1:14,14:28:63.22:2845,63,0	1/1:18,5:28:69.23:2489,69,0	0/0:20,0:20:57.20:0,57,1689	1/1:21,0:39:94.32:2648,94,0	1/1:13,0:21:45.15:1408,45,0	1/1:22,0:50:99:4404,129,0	1/1:13,0:35:80.29:2825,80,0	1/1:14,0:28:54.19:1912,54,0	1/1:21,0:39:96.33:3345,96,0	1/1:13,17:31:69.71:3323,70,0	1/1:11,0:18:43.37:1363,43,0	1/1:6,6:12:27.09:1319,27,0	1/1:25,0:29:62.07:1574,62,0	1/1:15,0:33:86.77:2981,87,0	0/0:25,0:25:63.20:0,63,1807	1/1:11,0:28:77.61:2644,78,0	1/1:7,0:16:35.99:1219,36,0	1/1:10,0:18:42.19:1311,42,0	1/1:11,16:26:75.26:3547,75,0	1/1:21,0:34:84.74:2691,85,0	1/1:15,0:30:69.24:2562,69,0	1/1:3,0:4:12.04:446,12,0
chr10	9157837	.	T	TAA	9255.74	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=-1.997;DP=611;FS=8.060;HRun=10;HaplotypeScore=91.9494;InbreedingCoeff=0.9425;MQ=64.40;MQ0=1;MQRankSum=-3.398;QD=20.52;ReadPosRankSum=-2.327;VQSLOD=3.2833;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,25:27:63.68:940,64,0	1/1:2,0:8:8.98:77,9,0	0/0:16,0:16:31.14:0,31,283	0/0:20,0:19:32.07:0,32,308	1/1:5,28:34:74.22:1038,74,0	1/1:3,30:34:72.24:1072,72,0	1/1:2,9:13:26.57:352,27,0	1/1:6,27:36:89.19:1199,89,0	0/0:26,0:26:78.18:0,78,793	0/0:34,0:34:87.14:0,87,875	0/0:21,0:21:29.58:0,30,522	1/1:4,0:17:13.27:118,13,0	1/1:3,0:17:18.03:172,18,0	1/1:3,0:13:17.83:149,18,0	0/0:31,0:31:83.39:0,83,830	1/1:1,24:26:66.69:970,67,0	1/1:8,0:20:20.96:186,21,0	1/1:0,13:17:41.10:522,41,0	1/1:7,0:23:47.71:408,48,0	1/1:5,0:21:21.44:185,21,0	0/0:10,0:10:21:0,21,213	1/1:7,0:17:24.48:231,24,0	1/1:4,0:19:18.03:172,18,0	1/1:4,0:13:9.48:86,9,0	1/1:6,21:29:62.69:886,63,0	1/1:6,0:28:34.63:246,35,0	1/1:9,3:29:26.96:236,27,0	1/1:8,0:8:3.84:13,4,0
chr10	9158768	.	A	AAGG	30251.44	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=9.212;DP=583;FS=6.226;HRun=0;HaplotypeScore=110.9648;InbreedingCoeff=0.9810;MQ=70.85;MQ0=2;MQRankSum=-5.284;QD=61.74;ReadPosRankSum=3.274;VQSLOD=6.1533;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,18:21:54.19:1280,54,0	1/1:0,2:3:9.03:203,9,0	0/0:23,0:19:40.28:0,40,663	0/0:26,0:16:33.96:0,34,528	1/1:1,26:29:75.21:1744,75,0	1/1:1,27:28:66.18:1571,66,0	1/1:2,22:25:60.21:1476,60,0	1/1:9,22:33:87.22:1902,87,0	0/0:21,0:21:63.19:0,63,1103	1/1:0,18:19:54.18:1287,54,0	1/1:0,12:12:30.10:719,30,0	1/1:1,20:21:57.20:1393,57,0	1/1:3,25:29:78.24:1879,78,0	1/1:1,18:21:42.14:1020,42,0	1/1:2,21:24:60.21:1458,60,0	1/1:1,26:28:72.25:1755,72,0	1/1:0,9:10:24.08:592,24,0	1/1:2,20:21:57.20:1386,57,0	1/1:5,18:23:66.23:1537,66,0	1/1:1,13:14:39.13:886,39,0	0/0:23,0:23:69.22:0,69,1238	1/1:1,6:7:18.06:400,18,0	1/1:0,14:16:42.04:974,42,0	1/1:3,23:26:69.24:1700,69,0	1/1:4,16:21:57.20:1306,57,0	1/1:0,16:16:48.16:1151,48,0	1/1:1,25:28:72.25:1754,72,0	1/1:0,12:14:36.12:880,36,0
chr10	9159179	.	G	GAA	13522.07	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=-13.689;DP=744;FS=0.000;HRun=8;HaplotypeScore=94.4101;InbreedingCoeff=0.9986;MQ=73.94;MQ0=1;MQRankSum=-0.849;QD=33.39;ReadPosRankSum=2.216;VQSLOD=4.7052;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,114,1247	1/1:1,13:14:36.12:571,36,0	0/0:28,0:25:56.78:0,57,572	0/0:19,0:18:38.50:0,38,390	0/0:23,0:23:57.13:0,57,626	0/0:28,0:28:78.20:0,78,869	0/0:21,0:21:63.17:0,63,702	0/0:29,0:28:66.16:0,66,735	0/0:15,0:15:42.09:0,42,458	1/1:3,33:37:99:1427,99,0	1/1:0,21:22:57.02:783,57,0	1/1:0,23:24:59.69:913,60,0	1/1:3,21:25:41.81:666,42,0	1/1:0,15:16:27.09:429,27,0	1/1:4,24:29:63.17:1000,63,0	0/0:38,0:38:99:0,99,1094	1/1:0,17:19:48.16:762,48,0	0/0:24,0:24:63.13:0,63,690	1/1:11,9:22:30.06:410,30,0	1/1:3,29:33:89.68:1183,90,0	0/0:38,0:38:99:0,105,1160	1/1:6,30:36:84.24:1305,84,0	1/1:4,24:29:47.91:697,48,0	1/1:4,27:30:57.19:891,57,0	0/0:32,0:32:90.19:0,90,980	1/1:2,25:28:80.89:1171,81,0	1/1:5,27:33:68.38:1029,68,0	1/1:0,7:7:18.06:286,18,0
chr10	9161660	.	CAAAAAA	C	6788.94	PASS	AB=0.667;AC=33;AF=0.589;AN=56;BaseQRankSum=6.157;DP=531;FS=18.644;HRun=18;HaplotypeScore=109.2267;InbreedingCoeff=0.8205;MQ=45.85;MQ0=21;MQRankSum=-4.812;QD=19.07;ReadPosRankSum=4.351;VQSLOD=0.0028;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:33:59.96:0,60,1030	1/1:3,5:8:8.98:153,9,0	0/0:10,0:5:15.02:0,15,315	0/0:4,0:3:3.86:0,4,23	0/0:12,0:19:38.76:0,39,596	0/0:16,0:24:45.04:0,45,790	0/0:7,0:16:27.52:0,28,505	0/0:12,0:19:33.05:0,33,656	0/0:3,0:10:3.01:0,3,87	1/1:7,10:17:18.79:291,19,0	1/1:6,19:24:41.33:611,41,0	1/1:2,11:14:20.35:377,20,0	1/1:4,17:22:38.71:606,39,0	1/1:7,19:28:28.31:657,28,0	1/1:12,21:33:25.04:680,25,0	0/0:9,0:16:30.53:0,31,580	1/1:5,17:20:10.82:438,11,0	0/1:14,0:26:6.43:6,0,645	1/1:13,13:23:33.96:442,34,0	1/1:7,14:20:27.40:398,27,0	0/0:6,0:5:6.02:0,6,69	1/1:7,14:21:29.63:502,30,0	1/1:5,14:18:20.61:284,21,0	1/1:5,6:11:5.30:100,5,0	0/0:11,0:16:29.86:0,30,396	1/1:6,14:20:28.45:618,28,0	1/1:7,10:17:23.29:373,23,0	1/1:6,5:8:3.67:251,4,0
chr10	9162182	.	G	GAGAC	23779.66	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=-17.633;DP=805;FS=1.587;HRun=0;HaplotypeScore=125.2194;InbreedingCoeff=0.9987;MQ=86.19;MQ0=0;MQRankSum=-5.758;QD=56.48;ReadPosRankSum=4.757;VQSLOD=6.2945;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,144,2580	1/1:2,9:11:27.09:701,27,0	0/0:30,0:30:74.84:0,75,1279	0/0:28,0:29:58.92:0,59,993	0/0:33,0:33:96.33:0,96,1707	0/0:23,0:23:57.20:0,57,1025	0/0:26,0:26:72.25:0,72,1283	0/0:32,0:32:93.30:0,93,1615	0/0:35,0:35:99:0,102,1822	1/1:4,24:28:78.27:2022,78,0	1/1:2,21:24:51.18:1321,51,0	1/1:5,36:42:99:2571,99,0	1/1:4,25:31:60.21:1557,60,0	1/1:1,25:26:60.21:1557,60,0	1/1:3,26:31:63.22:1635,63,0	0/0:23,0:23:60.21:0,60,1067	1/1:4,17:22:48.16:1240,48,0	0/0:24,0:24:72.25:0,72,1294	1/1:9,16:26:60.21:1504,60,0	1/1:4,22:27:54.19:1402,54,0	0/0:42,0:42:99:0,108,1876	1/1:7,17:23:51.18:1324,51,0	1/1:4,22:27:60.21:1557,60,0	1/1:8,28:39:81.28:2098,81,0	0/0:31,0:31:84.29:0,84,1510	1/1:10,19:29:60.17:1501,60,0	1/1:8,18:26:51.18:1323,51,0	1/1:1,7:8:18.06:467,18,0
chr10	9162869	.	CA	C	12824.26	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=16.140;DP=756;FS=0.000;HRun=8;HaplotypeScore=86.4054;InbreedingCoeff=0.9987;MQ=76.99;MQ0=0;MQRankSum=-1.214;QD=25.39;ReadPosRankSum=5.665;VQSLOD=4.8351;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:75.22:0,75,892	1/1:0,14:14:42.07:406,42,0	0/0:20,0:20:41.27:0,41,501	0/0:11,0:10:18.03:0,18,195	0/0:26,1:27:46.25:0,46,840	0/0:29,0:29:81.16:0,81,925	0/0:20,0:20:57.16:0,57,674	0/0:33,0:33:84.22:0,84,998	1/1:1,22:23:66.11:637,66,0	1/1:2,32:35:99:949,99,0	1/1:2,21:23:57.08:548,57,0	1/1:2,28:30:75.12:724,75,0	1/1:1,37:38:99:1014,105,0	1/1:4,28:32:78.12:753,78,0	1/1:3,27:30:75.12:724,75,0	0/0:33,0:33:93.28:0,93,1122	1/1:2,27:29:69.11:666,69,0	0/0:15,0:15:36.11:0,36,435	1/1:5,16:21:48.04:451,48,0	1/1:1,41:42:99:1179,123,0	1/1:5,16:21:45.07:435,45,0	1/1:0,31:31:90.14:869,90,0	1/1:3,33:36:93.15:898,93,0	1/1:2,18:20:45.07:435,45,0	0/0:37,0:37:90.27:0,90,1077	1/1:3,32:35:96.13:920,96,0	1/1:2,32:34:93.15:898,93,0	1/1:0,11:11:33.05:319,33,0
chr10	9165816	.	A	AG	1963.90	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-6.893;DP=657;FS=4.647;HRun=1;HaplotypeScore=62.6748;InbreedingCoeff=0.9842;MQ=90.12;MQ0=0;MQRankSum=-2.515;QD=37.77;ReadPosRankSum=1.947;VQSLOD=4.3029;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:84.28:0,84,1175	0/0:15,0:15:45.15:0,45,629	0/0:26,0:26:72.24:0,72,990	0/0:27,0:27:78.16:0,78,1046	0/0:20,0:20:60.20:0,60,834	0/0:13,0:13:36.11:0,36,486	0/0:27,0:27:81.24:0,81,1098	0/0:27,0:27:81.25:0,81,1088	1/1:2,18:20:51.15:790,51,0	0/0:17,0:17:48.16:0,48,670	0/0:14,0:14:39.13:0,39,545	0/0:41,0:41:99:0,111,1551	0/0:35,0:35:99:0,100,1367	0/0:41,0:41:99:0,117,1616	0/0:34,0:34:99:0,99,1383	0/0:40,0:40:99:0,117,1636	0/0:30,0:30:84.28:0,84,1175	0/0:19,0:19:54.18:0,54,753	0/0:13,0:13:39.12:0,39,530	0/0:14,0:14:42.14:0,42,587	1/1:2,30:32:81.28:1295,81,0	0/0:15,0:15:42.14:0,42,585	0/0:17,0:17:45.15:0,45,629	0/0:34,0:34:99:0,102,1389	0/0:14,0:14:42.14:0,42,586	0/0:16,0:16:48.16:0,48,671	0/0:23,0:23:69.23:0,69,964	0/0:4,0:4:12.04:0,12,168
chr10	9166069	.	T	TCACACA	4206.50	PASS	AB=0.870;AC=35;AF=0.673;AN=52;BaseQRankSum=2.571;DP=815;FS=0.480;HRun=0;HaplotypeScore=178.5520;InbreedingCoeff=0.5823;MQ=63.52;MQ0=18;MQRankSum=-1.945;QD=7.92;ReadPosRankSum=-1.716;VQSLOD=2.5682;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:40:50.63:0,51,747	1/1:6,0:8:5.10:94,5,0	./.	./.	0/0:13,0:14:28.42:0,28,450	0/0:20,0:22:20.19:0,20,461	0/0:33,0:33:59.94:0,60,993	0/1:46,0:44:37.59:38,0,154	0/0:20,0:31:8.21:0,8,293	1/1:33,0:35:9.68:391,10,0	1/1:14,0:17:11.90:88,12,0	1/1:11,17:38:8.54:149,9,0	1/1:16,14:32:12.04:299,12,0	1/1:13,14:31:9.03:216,9,0	1/1:25,0:31:29.97:338,30,0	0/0:40,0:43:70.70:0,71,1222	1/1:13,0:27:20.98:254,21,0	0/1:19,0:19:19.93:20,0,445	1/1:15,0:15:15.50:150,16,0	1/1:10,11:26:5.98:76,6,0	1/1:32,0:30:22.61:349,23,0	1/1:11,8:25:2.69:38,3,0	1/1:16,0:14:15:198,15,0	1/1:12,28:52:0.16:233,0,0	0/0:32,0:33:62.96:0,63,1035	1/1:20,0:46:37.36:801,37,0	0/1:10,14:28:31.63:320,0,32	1/1:5,0:5:10.94:154,11,0
chr10	9166114	.	T	TAC	1510.54	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=-1.206;DP=898;FS=12.157;HRun=0;HaplotypeScore=156.5735;InbreedingCoeff=0.8109;MQ=58.14;MQ0=23;MQRankSum=1.305;QD=10.64;ReadPosRankSum=-1.341;VQSLOD=2.6911;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:68.98:0,69,813	0/0:10,0:10:12.04:0,12,149	0/0:35,0:14:16.03:0,16,322	0/0:47,0:24:14.68:0,15,424	0/0:24,0:24:57.14:0,57,689	0/0:25,0:26:50.99:0,51,605	0/0:46,0:45:93.26:0,93,1125	0/0:43,0:41:72.20:0,72,877	0/0:28,0:28:47.95:0,48,567	1/1:18,14:32:45.62:731,46,0	1/1:11,18:29:24.08:378,24,0	0/0:37,0:37:50.81:0,51,589	0/0:35,0:35:54.49:0,54,784	0/0:35,0:35:66.19:0,66,800	1/1:14,23:38:32.15:520,32,0	0/0:46,0:45:90.27:0,90,1101	0/0:27,0:27:30.18:0,30,385	0/0:22,0:22:54.06:0,54,632	0/0:18,0:17:28.24:0,28,424	0/0:29,0:28:40.49:0,40,474	0/0:42,0:41:80.92:0,81,992	0/0:24,0:24:40.64:0,41,448	0/0:18,0:17:30.09:0,30,371	0/0:46,0:47:53.78:0,54,659	0/0:30,0:30:57.18:0,57,705	0/1:39,0:40:30.31:30,0,703	0/0:31,0:31:53.98:0,54,642	0/0:11,0:11:11.99:0,12,149
chr10	9167022	.	G	GTTC	1504.70	PASS	AB=0.667;AC=3;AF=0.054;AN=56;BaseQRankSum=8.588;DP=745;FS=8.123;HRun=0;HaplotypeScore=171.1597;InbreedingCoeff=0.6399;MQ=87.24;MQ0=0;MQRankSum=-9.172;QD=32.71;ReadPosRankSum=2.977;VQSLOD=3.9536;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,123,2293	0/0:13,0:13:39.13:0,39,719	0/0:36,0:36:99:0,105,1906	0/0:21,0:21:57.09:0,57,955	0/0:26,0:26:78.27:0,78,1454	0/0:28,0:28:75.26:0,75,1395	0/0:32,0:32:96.31:0,96,1757	0/0:35,0:35:99:0,105,1889	1/1:8,22:30:36.65:1279,37,0	0/0:27,0:27:72.25:0,72,1343	0/0:18,0:18:54.19:0,54,1006	0/0:32,0:32:96.32:0,96,1756	0/0:33,0:33:99:0,99,1813	0/0:28,0:28:81.26:0,81,1450	0/0:47,0:47:99:0,141,2598	0/0:27,0:27:81.28:0,81,1505	0/0:38,0:38:99:0,111,2051	0/0:22,0:22:63.22:0,63,1167	0/0:11,0:11:30.10:0,30,559	0/0:16,0:16:48.16:0,48,893	0/1:8,8:16:32.53:332,0,33	0/0:19,0:19:54.17:0,54,976	0/0:27,0:27:78.24:0,78,1392	0/0:32,0:32:93.30:0,93,1702	0/0:20,0:20:60.19:0,60,1088	0/0:24,0:24:69.24:0,69,1286	0/0:38,0:38:99:0,114,2082	0/0:6,0:6:14.70:0,15,279
chr10	9167023	.	A	ATCACAATGG	4504.59	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.594;DP=745;FS=2.015;HRun=0;HaplotypeScore=253.7692;InbreedingCoeff=0.9915;MQ=86.77;MQ0=0;MQRankSum=-9.844;QD=97.93;ReadPosRankSum=1.351;VQSLOD=5.1574;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,123,3977	0/0:13,0:13:39.13:0,39,1264	0/0:36,0:36:99:0,105,3197	0/0:20,0:20:57.15:0,57,1515	0/0:26,0:26:78.27:0,78,2472	0/0:29,0:29:81.26:0,81,2444	0/0:35,0:35:93.32:0,93,2999	0/0:35,0:35:99:0,102,2964	1/1:8,20:30:87.26:3217,87,0	0/0:27,0:27:81.25:0,81,2392	0/0:18,0:18:54.19:0,54,1731	0/0:32,0:32:96.32:0,96,2966	0/0:32,0:32:96.33:0,96,3044	0/0:28,0:28:84.27:0,84,2494	0/0:48,0:48:99:0,141,4469	0/0:27,0:27:81.27:0,81,2571	0/0:38,0:38:99:0,111,3487	0/0:22,0:22:63.22:0,63,1903	0/0:11,0:11:30.10:0,30,960	0/0:16,0:16:48.16:0,48,1478	1/1:8,8:16:33.10:1287,33,0	0/0:18,0:18:54.18:0,54,1682	0/0:27,0:27:78.24:0,78,2368	0/0:31,0:31:90.31:0,90,2935	0/0:19,0:19:57.20:0,57,1850	0/0:24,0:24:69.24:0,69,2248	0/0:39,0:39:99:0,114,3486	0/0:6,0:6:15.05:0,15,489
chr10	9168551	.	CT	C	8116.59	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=2.182;DP=742;FS=0.609;HRun=2;HaplotypeScore=83.9532;InbreedingCoeff=0.9949;MQ=82.23;MQ0=0;MQRankSum=-0.575;QD=36.07;ReadPosRankSum=1.361;VQSLOD=5.3387;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,45:47:99:1690,132,0	0/0:14,0:14:42.14:0,42,626	0/0:21,0:21:63.20:0,63,911	0/0:18,0:18:48.16:0,48,692	1/1:0,21:21:63.20:818,63,0	1/1:0,23:23:57.19:740,57,0	1/1:0,24:24:69.22:896,69,0	1/1:0,31:31:87.28:1129,87,0	0/0:32,0:32:96.33:0,96,1437	0/0:21,0:21:63.20:0,63,911	0/0:21,0:21:63.19:0,63,905	0/0:28,0:28:81.23:0,81,1182	0/0:32,0:32:96.33:0,96,1439	0/0:25,0:25:75.25:0,75,1105	0/0:39,0:39:99:0,117,1751	1/1:0,36:36:96.31:1246,96,0	0/0:24,0:24:72.24:0,72,1079	1/1:0,22:22:63.20:818,63,0	0/0:20,0:20:57.19:0,57,855	0/0:37,0:37:99:0,108,1618	0/0:38,0:38:99:0,111,1660	0/0:30,0:30:90.29:0,90,1326	0/0:24,0:24:69.21:0,69,994	0/0:30,0:30:90.30:0,90,1348	1/1:0,21:21:60.20:779,60,0	0/0:33,0:33:99:0,99,1466	0/0:26,0:25:78.26:0,78,1168	0/0:4,0:4:12.04:0,12,180
chr10	9171514	.	C	CT	520.93	PASS	AB=0.588;AC=3;AF=0.054;AN=56;BaseQRankSum=-6.506;DP=645;FS=6.275;HRun=10;HaplotypeScore=66.4232;InbreedingCoeff=0.6149;MQ=77.77;MQ0=0;MQRankSum=-1.147;QD=15.79;ReadPosRankSum=-0.502;VQSLOD=3.7832;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,1:23:56.90:0,57,468	0/0:15,0:15:38.95:0,39,320	0/0:27,0:26:42.74:0,43,335	0/0:14,0:14:20.54:0,21,172	0/0:26,0:26:73.94:0,74,597	0/0:20,0:20:47.93:0,48,394	0/0:22,0:22:62.93:0,63,517	0/0:42,1:43:57.84:0,58,678	0/1:6,14:20:53.46:307,0,53	0/0:31,0:32:64.92:0,65,523	0/0:21,2:23:24.89:0,25,408	0/0:27,0:28:36.98:0,37,446	0/0:28,0:32:83:0,83,633	0/0:34,0:36:75.91:0,76,601	0/0:32,0:32:80.87:0,81,665	0/0:19,0:20:43.96:0,44,351	0/0:21,0:23:61.01:0,61,480	0/0:10,0:10:29.97:0,30,246	0/0:28,0:29:55.90:0,56,446	0/0:22,0:22:47.66:0,48,382	1/1:0,13:13:30.08:320,30,0	0/0:21,1:22:18.92:0,19,362	0/0:20,1:21:27.93:0,28,432	0/0:16,0:16:35.93:0,36,296	0/0:23,0:24:61.93:0,62,496	0/0:26,0:26:68.91:0,69,565	0/0:22,0:23:67.96:0,68,548	0/0:3,0:3:8.99:0,9,74
chr10	9175067	.	T	TTCTCTCTC	8931.74	PASS	AB=0.711;AC=47;AF=0.904;AN=52;BaseQRankSum=-0.659;DP=756;FS=5.008;HRun=0;HaplotypeScore=198.8569;InbreedingCoeff=0.4245;MQ=65.53;MQ0=23;MQRankSum=-2.290;QD=14.67;ReadPosRankSum=-2.501;VQSLOD=3.1807;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:18,1:25:6.01:89,6,0	1/1:11,0:15:6.02:136,6,0	./.	0/0:67,0:31:2.99:0,3,23	0/1:16,0:27:27.21:27,0,27	1/1:12,0:27:14.92:322,15,0	1/1:13,0:21:15.01:211,15,0	1/1:34,0:34:31.49:563,31,0	0/0:17,0:18:21.07:0,21,492	1/1:27,6:34:49.72:1239,50,0	1/1:24,0:24:3.01:71,3,0	1/1:17,7:25:9.03:289,9,0	1/1:15,0:22:15.05:398,15,0	1/1:13,1:20:32.98:633,33,0	1/1:14,0:20:9.03:267,9,0	1/1:15,1:20:9.03:251,9,0	1/1:15,4:23:13.98:289,14,0	1/1:12,0:18:5.99:48,6,0	1/1:33,0:35:29.80:600,30,0	1/1:27,4:31:6.49:90,6,0	./.	1/1:29,0:30:15.03:278,15,0	1/1:28,0:27:12.02:154,12,0	1/1:11,0:15:18.06:458,18,0	1/1:22,0:27:9:153,9,0	1/1:20,7:31:45.15:1189,45,0	1/1:16,3:29:33.11:1058,33,0	1/1:17,0:17:6.01:117,6,0
chr10	9175102	.	TTCCC	T	605.83	PASS	AB=0.960;AC=11;AF=0.196;AN=56;BaseQRankSum=6.085;DP=581;FS=61.538;HRun=0;HaplotypeScore=118.3958;InbreedingCoeff=-0.2437;MQ=55.56;MQ0=13;MQRankSum=-3.282;QD=3.04;ReadPosRankSum=-2.560;VQSLOD=-0.5543;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:2:0,2,344	0/1:9,0:9:40.93:41,0,396	0/0:40,0:9:20.21:0,20,461	0/0:56,0:19:26.65:0,27,579	0/0:21,0:21:41.69:0,42,898	0/0:23,0:24:43.26:0,43,868	0/1:17,0:17:4.78:5,0,633	0/0:32,0:31:75.98:0,76,1841	0/0:19,0:19:54.18:0,54,1273	0/1:24,0:25:99:125,0,1133	0/0:14,0:16:0.54:0,1,649	0/1:16,0:16:17.46:17,0,684	0/0:20,0:21:44.18:0,44,898	0/1:21,1:21:99:255,0,561	0/0:12,0:14:23.18:0,23,691	0/0:12,0:12:6.49:0,6,509	0/1:21,0:20:14.62:15,0,763	0/0:13,0:13:22.70:0,23,589	0/1:17,0:17:99:158,0,849	0/0:28,0:24:23.41:0,23,1156	0/0:11,6:15:20.65:0,21,478	0/0:17,0:23:17.38:0,17,885	0/1:10,8:17:1.13:1,0,611	0/1:17,0:17:99:107,0,711	0/1:11,0:11:0.95:1,0,454	0/0:20,0:21:9.55:0,10,1134	0/1:24,0:24:14.16:14,0,856	0/0:10,0:10:30.10:0,30,735
chr10	9176635	.	G	GA	509.56	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-4.600;DP=527;FS=2.831;HRun=9;HaplotypeScore=53.2446;InbreedingCoeff=0.9817;MQ=78.13;MQ0=0;MQRankSum=-0.735;QD=20.38;ReadPosRankSum=0.632;VQSLOD=4.1975;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:41.98:0,42,365	0/0:6,0:6:18:0,18,156	0/0:20,0:20:22.62:0,23,233	0/0:11,0:11:20.24:0,20,153	0/0:27,0:27:65.96:0,66,573	0/0:19,0:19:53.98:0,54,469	0/0:14,0:14:38.99:0,39,338	0/0:35,0:35:86.93:0,87,750	1/1:1,10:11:24.06:265,24,0	0/0:16,0:16:41.96:0,42,361	0/0:21,0:22:56.01:0,56,475	0/0:16,0:16:47.99:0,48,417	0/0:26,0:26:65.96:0,66,572	0/0:16,0:16:16.95:0,17,285	0/0:26,0:26:62.95:0,63,543	0/0:24,1:25:38.80:0,39,566	0/0:20,0:20:38.96:0,39,339	0/0:13,0:13:29.99:0,30,260	0/0:25,1:26:35.77:0,36,533	0/0:25,0:26:65.01:0,65,553	1/1:1,13:14:33.09:365,33,0	0/0:9,0:9:23.99:0,24,208	0/0:20,0:20:53.99:0,54,469	0/0:13,0:13:32.98:0,33,287	0/0:22,0:22:59.98:0,60,520	0/0:25,0:25:59.97:0,60,521	0/0:21,0:21:59.96:0,60,516	0/0:12,0:12:20.96:0,21,182
chr10	9177361	.	A	AT	1122.35	PASS	AB=0.909;AC=5;AF=0.089;AN=56;BaseQRankSum=-4.631;DP=729;FS=3.725;HRun=9;HaplotypeScore=75.9657;InbreedingCoeff=0.7792;MQ=75.44;MQ0=0;MQRankSum=0.377;QD=16.75;ReadPosRankSum=1.406;VQSLOD=4.0655;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:80.95:0,81,703	0/0:14,0:14:26.97:0,27,234	0/0:16,0:16:29.91:0,30,249	0/0:21,0:21:32.28:0,32,316	0/0:37,0:37:71.97:0,72,625	0/0:26,1:27:38.92:0,39,566	0/0:22,0:22:62.97:0,63,543	0/0:33,0:33:71.95:0,72,619	1/1:2,26:28:72.19:797,72,0	0/0:29,0:29:80.98:0,81,703	0/0:25,0:25:53.99:0,54,469	0/0:30,0:30:74.94:0,75,647	0/0:38,0:38:92.94:0,93,804	0/0:28,0:28:77.98:0,78,677	0/0:29,0:29:80.97:0,81,699	0/0:28,1:29:36.03:0,36,541	0/0:12,0:12:23.97:0,24,208	0/0:10,0:10:29.99:0,30,260	0/1:18,2:20:24.38:24,0,271	0/0:37,0:39:96.91:0,97,815	1/1:3,16:19:39.11:431,39,0	0/0:25,0:26:53.82:0,54,469	0/0:23,0:23:41.82:0,42,356	0/0:26,0:26:74.98:0,75,651	0/0:29,0:29:68.98:0,69,599	0/0:40,0:40:98.96:0,99,859	0/0:30,0:31:80.01:0,80,683	0/0:12,0:12:29.99:0,30,260
chr10	9184952	.	ATGG	A	2459.45	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=10.815;DP=1121;FS=5.491;HRun=0;HaplotypeScore=161.5257;InbreedingCoeff=0.9897;MQ=60.45;MQ0=5;MQRankSum=-0.571;QD=23.42;ReadPosRankSum=2.304;VQSLOD=3.6469;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:52:99:0,107,1984	0/0:16,0:16:42.08:0,42,768	0/0:44,0:38:56.60:0,57,875	0/0:40,0:39:43.74:0,44,737	0/0:46,0:46:99:0,108,2155	0/0:21,0:21:54.17:0,54,1040	0/0:38,0:38:75.20:0,75,1362	0/0:34,0:34:78.23:0,78,1400	1/1:17,33:50:84.28:1214,84,0	0/0:35,0:35:72.67:0,73,1299	0/0:23,0:23:54.16:0,54,1062	0/0:68,0:68:99:0,147,2839	0/0:60,1:61:99:0,147,2820	0/0:50,0:50:92.75:0,93,2497	0/0:50,1:51:79.96:0,80,2201	0/0:45,0:45:99:0,123,2326	0/0:35,0:35:52.28:0,52,1410	0/0:25,0:25:21.05:0,21,725	0/0:24,0:22:36.11:0,36,674	0/0:46,0:46:99:0,99,1907	1/1:18,37:55:96.32:1367,96,0	0/0:28,0:28:51.14:0,51,958	0/0:28,0:28:51.16:0,51,970	0/0:64,0:64:99:0,162,3185	0/0:44,0:44:90.30:0,90,1778	0/0:47,0:47:99:0,99,1923	0/0:39,0:39:96.26:0,96,1771	0/0:10,0:10:15.05:0,15,307
chr10	9185377	.	GA	G	759.94	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=8.100;DP=829;FS=0.756;HRun=3;HaplotypeScore=79.3337;InbreedingCoeff=0.9998;MQ=84.46;MQ0=0;MQRankSum=-1.587;QD=30.40;ReadPosRankSum=0.397;VQSLOD=3.3362;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,105,1510	0/0:12,0:12:36.12:0,36,515	0/0:35,0:35:96.21:0,96,1230	0/0:17,0:17:44.34:0,44,600	0/0:34,0:34:99:0,102,1422	0/0:33,0:33:96.32:0,96,1361	0/0:20,0:20:60.20:0,60,860	0/0:40,0:40:99:0,117,1645	1/1:1,24:25:69.22:855,69,0	0/0:41,0:41:99:0,117,1642	0/0:24,0:24:66.18:0,66,921	0/0:35,0:35:99:0,99,1391	0/0:32,0:32:87.29:0,87,1251	0/0:28,0:27:84.21:0,84,1146	0/0:28,0:28:84.26:0,84,1167	0/0:29,1:30:47.08:0,47,1093	0/0:30,0:30:90.29:0,90,1267	0/0:16,0:16:48.14:0,48,663	0/0:28,0:28:84.25:0,84,1166	0/0:41,0:41:99:0,120,1693	0/0:18,0:18:51.17:0,51,732	0/0:38,0:38:99:0,114,1620	0/0:22,0:22:63.21:0,63,899	0/0:39,0:39:99:0,114,1641	0/0:39,0:39:99:0,114,1626	0/0:29,0:29:87.29:0,87,1231	0/0:39,0:38:99:0,111,1575	0/0:21,0:21:63.21:0,63,903
chr10	9186421	.	GAAGT	G	8701.94	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=8.185;DP=623;FS=7.597;HRun=0;HaplotypeScore=117.1282;InbreedingCoeff=0.9986;MQ=81.67;MQ0=0;MQRankSum=-7.587;QD=50.89;ReadPosRankSum=1.157;VQSLOD=6.0122;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,27:27:66.23:1380,66,0	0/0:13,0:13:39.13:0,39,1125	0/0:23,0:23:66.23:0,66,1776	0/0:17,0:17:48.10:0,48,1186	1/1:0,17:17:33.11:688,33,0	1/1:0,24:24:57.20:1195,57,0	1/1:0,23:23:51.18:1067,51,0	1/1:0,24:24:66.20:1293,66,0	0/0:20,0:20:57.20:0,57,1599	0/0:28,0:28:84.28:0,84,2364	0/0:20,0:20:60.21:0,60,1704	0/0:24,0:24:72.25:0,72,2052	0/0:24,0:24:72.23:0,72,1968	0/0:32,0:32:96.33:0,96,2736	0/0:28,0:28:84.28:0,84,2374	1/1:0,23:23:66.23:1382,66,0	0/0:30,0:30:90.31:0,90,2573	1/1:0,13:13:39.13:817,39,0	0/0:18,0:18:54.17:0,54,1504	0/0:31,0:31:90.31:0,90,2553	0/0:24,0:24:69.24:0,69,1982	0/0:18,0:18:54.17:0,54,1502	0/0:17,0:17:48.16:0,48,1317	0/0:25,0:25:75.26:0,75,2110	1/1:0,20:20:42.14:880,42,0	0/0:25,0:25:75.24:0,75,2084	0/0:29,0:29:87.30:0,87,2501	0/0:6,0:6:18.06:0,18,521
chr10	9186977	.	ATGTGTGTGTGTG	A	292.51	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.657;DP=618;FS=0.000;HRun=0;HaplotypeScore=195.4640;InbreedingCoeff=0.7936;MQ=64.27;MQ0=3;MQRankSum=-2.566;QD=10.83;ReadPosRankSum=-3.242;VQSLOD=2.0848;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:27:30.09:0,30,1219	0/0:11,0:11:24.08:0,24,1192	0/0:26,0:20:12.04:0,12,290	0/0:35,0:28:9.03:0,9,192	0/0:21,0:21:30.10:0,30,1401	0/0:17,0:17:22.41:0,22,1211	0/0:27,0:27:38.24:0,38,1906	0/0:25,0:25:24.93:0,25,619	1/1:18,9:27:12.04:378,12,0	0/0:26,0:26:47.44:0,47,2089	0/0:15,0:15:15.05:0,15,571	0/0:23,0:25:32.18:0,32,1390	0/0:20,0:21:27.07:0,27,1045	0/0:25,0:25:23.73:0,24,1261	0/0:19,0:20:29.23:0,29,1359	0/0:18,0:18:27.08:0,27,1251	0/0:21,0:21:36.12:0,36,1802	0/0:10,0:10:15.05:0,15,848	0/0:20,0:20:21.07:0,21,1063	0/0:19,0:19:24.07:0,24,1051	0/0:26,0:24:14.85:0,15,644	0/0:19,0:19:24.08:0,24,1070	0/0:10,0:20:10.46:0,10,454	0/0:14,0:21:18.06:0,18,670	0/0:20,0:20:24.08:0,24,1269	0/0:36,0:39:45.15:0,45,1707	0/0:21,0:21:36.11:0,36,1350	0/0:14,0:15:36.59:0,37,1667
chr10	9187958	.	ATGTG	A	1509.33	PASS	AB=0.971;AC=23;AF=0.411;AN=56;BaseQRankSum=-4.013;DP=683;FS=7.860;HRun=0;HaplotypeScore=147.7371;InbreedingCoeff=-0.0414;MQ=57.33;MQ0=16;MQRankSum=2.084;QD=3.86;ReadPosRankSum=3.596;VQSLOD=2.0318;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:53,0:51:12.20:51,12,0	0/0:14,0:13:2.81:0,3,25	0/0:40,1:18:2.85:0,3,21	0/0:32,0:25:3.01:0,3,44	0/0:24,0:24:0:0,0,0	0/0:26,0:25:0.47:0,0,1	0/0:25,0:24:5.97:0,6,48	0/1:31,0:31:31.88:32,0,60	0/0:24,0:24:39.96:0,40,577	1/1:15,10:25:14.67:471,15,0	1/1:6,10:16:3.01:35,3,0	0/1:10,0:10:31.81:44,0,32	0/0:13,0:11:2.97:0,3,42	0/0:24,0:24:11.98:0,12,104	0/1:15,13:28:18.20:68,0,18	0/0:39,0:39:4.02:0,4,29	0/1:15,0:14:28.19:28,0,157	0/1:18,0:17:11.45:11,0,19	0/1:17,0:12:49.85:59,0,50	0/1:21,0:21:33.81:34,0,94	0/1:28,0:26:35.20:35,0,49	0/1:22,0:22:36.24:37,0,36	1/1:5,13:18:5.74:55,6,0	1/1:33,1:33:22.04:677,22,0	1/1:24,0:24:2.68:13,3,0	0/0:30,0:29:3.67:0,4,104	0/1:21,0:21:12.41:12,0,56	0/1:10,0:10:5.64:6,0,104
chr10	9187981	.	TGTGAGAGA	T	3080.85	PASS	AB=1.000;AC=31;AF=0.596;AN=52;BaseQRankSum=-9.171;DP=548;FS=12.408;HRun=0;HaplotypeScore=151.1261;InbreedingCoeff=-0.1482;MQ=52.10;MQ0=11;MQRankSum=1.225;QD=6.53;ReadPosRankSum=-2.048;VQSLOD=1.8045;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:48,0:46:44.88:354,45,0	1/1:7,0:6:14.93:117,15,0	./.	./.	0/0:4,13:17:0:0,0,1	1/1:6,18:23:2.41:52,2,0	1/1:20,0:20:19.90:169,20,0	1/1:16,0:15:2.97:75,3,0	0/1:23,0:23:0.38:0,0,383	0/1:17,0:17:99:189,0,143	0/1:16,0:16:10.74:11,0,140	0/1:10,0:10:61.30:61,0,319	0/1:16,0:14:74.69:75,0,226	0/1:23,0:23:66.01:66,0,876	0/0:24,0:24:29.75:0,30,623	1/1:6,34:40:3.39:65,3,0	0/0:11,0:11:4.96:0,5,494	1/1:16,0:15:25.64:412,26,0	0/1:18,0:14:26.22:26,0,174	0/1:17,0:17:79.89:91,0,80	1/1:30,0:28:23.45:175,23,0	0/1:18,0:18:99:112,0,102	0/0:14,0:14:3.60:0,4,17	0/1:33,0:32:88.20:88,0,619	1/1:26,0:26:51.25:664,51,0	0/1:20,0:19:99:169,0,403	0/1:24,0:24:99:185,0,296	0/1:9,0:9:80.38:80,0,89
chr10	9187983	.	TGAGAGAGA	T	572.19	PASS	AB=0.796;AC=10;AF=0.208;AN=48;BaseQRankSum=-0.674;DP=563;FS=15.670;HRun=0;HaplotypeScore=167.3559;InbreedingCoeff=0.6740;MQ=51.10;MQ0=12;MQRankSum=0.937;QD=3.35;ReadPosRankSum=-0.833;VQSLOD=1.9236;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:31,16:45:0:1,0,0	./.	./.	./.	0/0:17,0:17:0:0,0,0	1/1:23,0:23:2.85:66,3,0	0/1:18,0:21:0.17:0,0,0	0/0:17,0:16:14.14:0,14,93	0/0:24,0:24:25.89:0,26,214	0/0:21,0:21:21.06:0,21,548	0/0:16,0:16:6.02:0,6,199	0/0:14,0:13:15.05:0,15,544	0/0:18,0:16:12.04:0,12,301	0/0:24,0:24:38.16:0,38,1207	0/0:22,0:23:29.81:0,30,839	1/1:38,1:39:3.39:41,3,0	0/0:12,0:11:23.32:0,23,673	1/1:12,1:12:14.61:246,15,0	0/0:17,0:14:23.29:0,23,399	0/0:23,0:23:12.04:0,12,191	./.	0/0:20,0:20:6.02:0,6,150	0/0:14,0:14:5.98:0,6,59	0/0:33,0:31:51.14:0,51,1102	1/1:25,1:26:24.33:350,24,0	0/0:19,0:18:21.96:0,22,625	0/0:27,0:27:25.63:0,26,554	0/0:10,0:10:3.90:0,4,89
chr10	9188668	.	C	CGT	1929.88	PASS	AB=0.627;AC=10;AF=0.179;AN=56;BaseQRankSum=-3.148;DP=684;FS=8.702;HRun=0;HaplotypeScore=95.5495;InbreedingCoeff=0.7017;MQ=56.38;MQ0=18;MQRankSum=0.498;QD=11.99;ReadPosRankSum=1.845;VQSLOD=2.7971;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:52:88.07:0,88,1014	0/0:9,0:9:15.04:0,15,175	0/0:28,0:14:14.94:0,15,153	0/0:28,0:15:18.03:0,18,195	0/0:19,0:19:39.10:0,39,444	0/0:19,0:19:29.68:0,30,325	0/0:28,0:31:37.89:0,38,576	0/0:18,0:17:27:0,27,287	1/1:11,0:35:15.80:187,16,0	1/1:13,12:24:7.17:488,7,0	0/1:8,12:19:99:164,0,116	0/0:23,0:26:53.91:0,54,569	0/0:17,0:18:35.94:0,36,397	0/0:41,0:42:71.97:0,72,994	1/1:4,10:17:18.06:282,18,0	0/0:15,0:16:29.90:0,30,316	0/0:37,0:37:40.80:0,41,867	0/0:26,0:26:39.09:0,39,442	0/0:28,0:25:38.64:0,39,417	0/0:17,0:18:41.78:0,42,451	0/0:21,0:32:21.66:0,22,126	0/0:20,0:20:47.97:0,48,537	0/1:9,13:22:39.18:346,0,39	1/1:18,22:38:10.17:623,10,0	0/0:13,0:15:29.84:0,30,311	0/0:15,0:17:27.15:0,27,377	0/0:10,0:10:21.06:0,21,245	0/0:5,0:5:15.04:0,15,175
chr10	9189606	.	AC	A	312.62	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.014;DP=617;FS=2.618;HRun=3;HaplotypeScore=61.1243;InbreedingCoeff=0.9991;MQ=70.93;MQ0=0;MQRankSum=-2.712;QD=26.05;ReadPosRankSum=-0.676;VQSLOD=2.8005;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:87.27:0,87,1227	0/0:11,0:11:33.11:0,33,475	0/0:30,0:30:75.35:0,75,1002	0/0:20,0:19:44.94:0,45,579	0/0:31,0:31:90.29:0,90,1276	0/0:31,0:31:90.30:0,90,1290	0/0:18,0:18:54.18:0,54,777	0/0:31,0:31:87.28:0,87,1219	0/0:24,0:24:72.24:0,72,1035	0/0:24,0:24:69.23:0,69,994	0/0:28,0:28:81.27:0,81,1165	0/0:22,0:22:66.21:0,66,930	0/0:24,0:24:66.20:0,66,929	0/0:18,0:18:51.17:0,51,733	0/0:26,0:26:78.26:0,78,1123	0/0:20,0:20:60.19:0,60,845	0/0:23,0:23:69.23:0,69,989	0/0:20,0:20:60.20:0,60,862	0/0:12,0:12:36.09:0,36,467	0/0:36,0:36:99:0,108,1514	1/1:1,11:12:33.10:407,33,0	0/0:13,0:13:39.13:0,39,560	0/0:17,0:17:51.17:0,51,733	0/0:14,0:14:39.13:0,39,562	0/0:19,0:19:57.17:0,57,799	0/0:28,0:28:84.28:0,84,1207	0/0:21,0:21:63.18:0,63,870	0/0:12,0:12:36.12:0,36,515
chr10	9189829	.	T	TTTTG	1553.60	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-0.053;DP=655;FS=0.000;HRun=0;HaplotypeScore=100.7237;InbreedingCoeff=0.8853;MQ=65.26;MQ0=1;MQRankSum=-3.115;QD=25.89;ReadPosRankSum=-0.912;VQSLOD=3.2986;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,99,1475	0/0:7,0:7:15.05:0,15,238	0/0:18,0:10:5.99:0,6,69	0/0:21,0:16:12.04:0,12,179	0/0:22,0:22:51.11:0,51,737	0/0:21,0:22:45.15:0,45,695	0/0:24,0:24:39.13:0,39,608	0/0:19,0:19:12.04:0,12,172	1/1:13,0:23:39.13:672,39,0	0/0:32,0:32:42.14:0,42,647	0/0:20,0:20:36.11:0,36,550	0/0:22,0:22:51.17:0,51,787	0/0:23,0:23:27.09:0,27,427	0/0:31,0:31:51.15:0,51,767	0/0:29,0:29:72.25:0,72,1139	0/0:29,0:29:78.25:0,78,1209	0/0:32,0:32:60.20:0,60,951	0/0:20,0:20:42.09:0,42,615	0/0:25,0:25:27.07:0,27,385	0/0:20,0:21:36.11:0,36,551	1/1:18,17:37:42.14:1003,42,0	0/0:19,0:19:39.13:0,39,612	0/0:18,0:18:27.08:0,27,406	0/0:27,0:27:38.85:0,39,766	0/0:15,0:15:24.07:0,24,360	0/0:26,0:26:42.14:0,42,666	0/0:23,0:23:66.23:0,66,1048	0/0:8,0:8:9:0,9,117
chr10	9192181	.	G	GCTCTCTCT	5198.61	PASS	AB=0.964;AC=42;AF=0.808;AN=52;BaseQRankSum=-1.180;DP=524;FS=12.459;HRun=0;HaplotypeScore=131.4059;InbreedingCoeff=0.1464;MQ=57.66;MQ0=25;MQRankSum=-2.000;QD=11.45;ReadPosRankSum=0.859;VQSLOD=3.1021;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:15,0:14:33.33:33,0,60	1/1:12,0:11:6.02:192,6,0	./.	./.	0/0:14,0:17:0.47:0,0,1	1/1:11,0:10:3.01:94,3,0	0/1:14,0:14:55.67:56,0,123	1/1:33,0:33:14.13:158,14,0	0/1:15,0:15:8.55:107,0,9	1/1:18,0:17:4.30:16,4,0	1/1:10,0:10:6.02:82,6,0	1/1:23,1:24:12.04:352,12,0	1/1:19,0:20:12.04:419,12,0	1/1:20,1:22:12.49:335,12,0	1/1:16,0:16:3.01:96,3,0	1/1:7,5:13:6.02:114,6,0	1/1:11,0:11:7.84:175,8,0	1/1:9,0:8:11.63:234,12,0	1/1:22,2:23:26.26:764,26,0	1/1:18,0:17:0.46:1,0,0	0/0:12,0:9:3.01:0,3,73	1/1:26,0:23:6.02:146,6,0	0/1:20,0:24:57.49:204,0,57	0/0:12,0:12:2.74:0,3,12	1/1:27,0:28:5.04:80,5,0	1/1:24,0:25:37.31:897,37,0	1/1:30,0:29:6.02:190,6,0	1/1:27,1:25:24.34:454,24,0
chr10	9192239	.	TGTGAGAGAGAGAGAGAGA	T	1766.65	PASS	AB=0.814;AC=14;AF=0.269;AN=52;BaseQRankSum=-1.437;DP=434;FS=19.533;HRun=0;HaplotypeScore=135.6002;InbreedingCoeff=0.1273;MQ=31.87;MQ0=132;MQRankSum=-3.123;QD=8.88;ReadPosRankSum=3.792;VQSLOD=1.2085;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:6:14.92:0,15,885	1/1:8,1:5:7.44:168,7,0	./.	./.	0/0:25,0:10:14.79:0,15,1132	0/0:9,0:6:6.91:0,7,446	0/0:16,0:13:10.22:0,10,464	0/0:13,0:5:9.03:0,9,488	0/0:15,0:9:20.92:0,21,773	0/0:14,0:11:26.74:0,27,491	0/0:15,0:10:5.99:0,6,50	0/1:16,1:11:6.16:6,0,25	1/1:15,0:13:3.26:140,3,0	0/1:10,14:20:10.51:149,0,11	0/0:11,0:8:5.97:0,6,91	0/0:13,0:9:11.97:0,12,836	0/1:13,0:5:3.23:23,0,3	0/1:16,0:11:2.16:2,0,212	0/1:15,7:17:31.80:666,0,32	0/1:10,12:17:0:0,0,0	0/0:7,0:2:3.01:0,3,124	0/0:19,4:16:2.90:0,3,16	0/0:25,0:22:7.24:0,7,53	0/0:18,0:10:3.01:0,3,40	0/0:16,0:14:11.77:0,12,873	0/1:6,0:19:15.80:472,0,16	1/1:6,0:12:1.18:176,1,0	0/1:23,0:10:50.32:100,0,50
chr10	9192241	.	TGAGAGAGA	T	881.26	PASS	AB=0.941;AC=24;AF=0.500;AN=48;BaseQRankSum=4.352;DP=441;FS=6.358;HRun=0;HaplotypeScore=106.3601;InbreedingCoeff=0.5635;MQ=32.02;MQ0=133;MQRankSum=-3.535;QD=4.10;ReadPosRankSum=2.318;VQSLOD=1.2253;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:8:15.05:0,15,525	1/1:9,0:5:3.01:56,3,0	./.	./.	0/0:26,0:11:15.05:0,15,560	0/0:10,0:7:9.50:0,10,321	0/0:14,0:11:5.98:0,6,230	0/0:17,0:9:15.05:0,15,418	0/0:15,0:9:9.03:0,9,337	1/1:11,6:14:4.50:146,5,0	0/1:13,0:10:0:0,0,0	0/1:17,0:11:0:0,0,0	1/1:13,0:12:2.21:54,2,0	1/1:23,0:19:3.01:56,3,0	1/1:11,0:8:3.01:74,3,0	0/0:14,0:10:11.94:0,12,397	./.	0/0:16,0:11:3.01:0,3,99	1/1:22,0:15:14.84:236,15,0	1/1:21,0:16:0.47:1,0,0	1/1:6,0:1:1.55:4,2,0	./.	0/0:16,0:22:0:0,0,0	0/0:13,5:11:0:0,0,0	0/0:17,0:15:11.87:0,12,427	1/1:22,0:19:11.71:223,12,0	1/1:14,0:12:6.02:118,6,0	1/1:24,0:10:3.01:56,3,0
chr10	9192592	.	C	CTGGACTT	1579.55	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=4.988;DP=661;FS=4.511;HRun=0;HaplotypeScore=151.7527;InbreedingCoeff=0.9976;MQ=83.65;MQ0=0;MQRankSum=-4.616;QD=65.81;ReadPosRankSum=-1.816;VQSLOD=3.0342;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,123,3021	0/0:11,0:11:33.11:0,33,796	0/0:18,0:18:47.79:0,48,877	0/0:29,0:28:66.19:0,66,1480	0/0:25,0:25:75.24:0,75,1856	0/0:19,0:19:57.18:0,57,1408	0/0:19,0:19:54.19:0,54,1380	0/0:33,0:33:87.28:0,87,2115	1/1:6,6:12:36.12:1150,36,0	0/0:20,0:20:54.18:0,54,1374	0/0:19,0:19:48.16:0,48,1222	0/0:21,0:21:60.19:0,60,1466	0/0:26,0:26:72.25:0,72,1833	0/0:27,0:27:81.26:0,81,2020	0/0:25,0:25:75.24:0,75,1906	0/0:15,0:15:45.14:0,45,1103	0/0:35,0:35:99:0,105,2513	0/0:25,0:25:69.21:0,69,1705	0/0:33,0:33:99:0,99,2347	0/0:20,0:20:51.17:0,51,1286	1/1:9,3:12:21.02:550,21,0	0/0:26,0:26:72.23:0,72,1805	0/0:20,0:20:45.15:0,45,1185	0/0:30,0:30:90.31:0,90,2358	0/0:17,0:17:45.14:0,45,1121	0/0:32,0:32:90.30:0,90,2264	0/0:31,0:31:93.23:0,93,2154	0/0:19,0:19:54.16:0,54,1334
chr10	9192600	.	T	TG	558.09	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.552;DP=657;FS=0.000;HRun=1;HaplotypeScore=71.2908;InbreedingCoeff=0.9967;MQ=86.29;MQ0=0;MQRankSum=-5.074;QD=26.58;ReadPosRankSum=-0.665;VQSLOD=3.2019;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,132,1698	0/0:8,0:8:24.04:0,24,292	0/0:19,0:19:50.98:0,51,626	0/0:30,0:29:77.97:0,78,887	0/0:26,0:26:78.15:0,78,958	0/0:19,0:19:54.16:0,54,686	0/0:21,0:21:57.15:0,57,700	0/0:30,0:30:75.24:0,75,964	1/1:1,8:9:24.08:354,24,0	0/0:22,0:22:57.17:0,57,720	0/0:19,0:19:51.16:0,51,657	0/0:19,0:19:54.17:0,54,699	0/0:24,0:24:69.22:0,69,884	0/0:26,0:26:75.24:0,75,972	0/0:25,0:25:75.24:0,75,974	0/0:17,0:17:51.17:0,51,661	0/0:37,0:37:99:0,108,1401	0/0:22,0:22:66.17:0,66,838	0/0:30,0:30:90.29:0,90,1168	0/0:24,0:24:69.22:0,69,892	1/1:3,9:12:23.67:324,24,0	0/0:27,0:27:81.22:0,81,1032	0/0:18,0:18:48.14:0,48,608	0/0:30,0:30:90.29:0,90,1168	0/0:16,0:16:45.15:0,45,583	0/0:33,0:33:99:0,99,1260	0/0:30,0:30:87.27:0,87,1103	0/0:20,0:20:57.19:0,57,739
chr10	9194519	.	CT	C	18950.67	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-6.560;DP=723;FS=0.000;HRun=6;HaplotypeScore=75.8937;InbreedingCoeff=0.9915;MQ=79.30;MQ0=0;MQRankSum=-9.248;QD=27.46;ReadPosRankSum=6.350;VQSLOD=4.7277;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,32:37:84.20:903,84,0	1/1:0,14:14:36.09:387,36,0	0/0:22,0:22:59.87:0,60,686	0/0:10,0:11:29.87:0,30,330	1/1:6,26:32:75.18:806,75,0	1/1:2,27:29:78.20:838,78,0	1/1:2,25:27:69.17:741,69,0	1/1:4,32:36:96.21:1021,96,0	1/1:2,25:27:72.18:774,72,0	1/1:1,26:27:81.12:855,81,0	1/1:2,23:25:60.15:645,60,0	1/1:2,27:29:69.17:741,69,0	1/1:2,19:21:50.98:548,51,0	1/1:2,27:29:66.17:709,66,0	1/1:3,36:39:99:1064,99,0	1/1:0,28:28:81.20:871,81,0	1/1:2,28:30:84.21:903,84,0	1/1:1,18:19:48.12:516,48,0	1/1:2,17:19:51.10:534,51,0	1/1:3,35:38:96.15:1006,96,0	1/1:2,23:25:63.16:677,63,0	1/1:2,17:19:45.11:482,45,0	1/1:4,29:33:84.21:903,84,0	1/1:1,27:28:81.20:871,81,0	1/1:2,17:19:45.11:483,45,0	1/1:0,23:23:69.17:740,69,0	1/1:1,26:27:72.06:773,72,0	1/1:5,5:10:15.03:161,15,0
chr10	9196996	.	G	GA	2251.55	PASS	AB=0.850;AC=19;AF=0.339;AN=56;BaseQRankSum=14.528;DP=574;FS=100.668;HRun=1;HaplotypeScore=143.5034;InbreedingCoeff=-0.5176;MQ=49.59;MQ0=1;MQRankSum=-10.940;QD=5.37;ReadPosRankSum=-2.227;VQSLOD=-0.3907;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:48:0,48,726	0/1:10,1:11:58.93:59,0,170	0/0:32,0:22:62.56:0,63,738	0/0:23,0:17:39.85:0,40,497	0/1:13,12:25:99:400,0,356	0/1:18,5:23:99:159,0,486	0/1:18,2:20:51.21:51,0,492	0/1:16,5:21:99:150,0,488	0/1:18,1:19:7.13:7,0,429	0/1:18,6:24:99:205,0,550	0/1:11,4:15:99:123,0,345	0/0:11,0:11:19.06:0,19,246	0/1:27,3:30:76.82:77,0,632	0/1:24,5:29:99:113,0,569	0/1:22,2:24:64.24:64,0,490	0/1:22,2:24:89.82:90,0,486	0/1:8,1:9:16.89:17,0,284	0/0:13,0:14:31.22:0,31,381	0/1:10,3:13:86.62:87,0,278	0/1:19,9:28:99:292,0,545	0/0:8,0:8:7.10:0,7,220	0/0:26,0:26:69.21:0,69,878	0/1:20,6:26:99:154,0,499	0/0:16,0:16:39.13:0,39,505	0/1:20,5:25:99:171,0,500	0/1:23,2:25:23.06:23,0,674	0/1:22,5:28:99:168,0,590	0/0:3,0:3:9.03:0,9,117
chr10	9197028	.	A	AAGG	4663.13	PASS	AC=50;AF=1.000;AN=50;DP=209;FS=0.000;HRun=0;HaplotypeScore=191.7763;InbreedingCoeff=-0.0290;MQ=31.96;MQ0=0;QD=22.64;VQSLOD=4.5127;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,0:12:24.29:241,24,0	1/1:6,0:6:11.87:137,12,0	./.	./.	1/1:5,0:5:11.95:119,12,0	1/1:8,0:8:16.76:190,17,0	1/1:8,0:8:16.22:184,16,0	1/1:7,0:7:15.44:219,15,0	1/1:9,0:9:26.91:282,27,0	1/1:9,0:9:19.30:248,19,0	1/1:3,0:3:5.60:43,6,0	1/1:8,0:8:19.14:211,19,0	1/1:14,0:14:37.20:375,37,0	1/1:11,0:11:23.49:244,23,0	1/1:7,0:7:18.90:217,19,0	1/1:9,0:9:23.75:216,24,0	1/1:5,0:5:3.01:46,3,0	1/1:3,0:3:7.22:56,7,0	1/1:6,0:6:16.71:142,17,0	1/1:6,0:6:15.03:182,15,0	1/1:3,0:3:4.25:36,4,0	1/1:17,10:27:38.42:370,38,0	1/1:8,0:8:19.36:190,19,0	1/1:9,0:9:12.09:117,12,0	1/1:5,0:4:11.53:146,12,0	1/1:9,0:9:26.02:283,26,0	1/1:9,0:9:19.48:170,19,0	./.
chr10	9197594	.	G	GA	403.43	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-3.170;DP=552;FS=1.908;HRun=9;HaplotypeScore=54.0432;InbreedingCoeff=0.6459;MQ=71.96;MQ0=0;MQRankSum=1.147;QD=26.90;ReadPosRankSum=-1.903;VQSLOD=3.4271;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:50.97:0,51,443	0/0:3,0:3:6:0,6,52	0/0:12,0:12:17.71:0,18,151	0/0:11,0:12:1.03:0,1,119	0/0:22,0:22:26.78:0,27,462	0/0:27,0:27:71.97:0,72,625	0/0:13,0:13:35.99:0,36,312	0/0:37,0:37:83.95:0,84,724	0/0:14,0:14:38.96:0,39,332	0/0:28,0:28:74.97:0,75,650	0/0:17,0:17:44.98:0,45,391	0/0:17,0:18:50.01:0,50,419	0/0:16,0:16:41.99:0,42,365	0/0:25,0:25:74.99:0,75,651	0/0:16,0:16:38.98:0,39,339	0/0:21,0:22:45.32:0,45,477	0/0:34,0:34:92.94:0,93,804	0/0:22,0:22:62.99:0,63,547	0/0:22,0:22:53.96:0,54,464	0/0:23,0:23:56.98:0,57,495	1/1:0,15:15:45.12:498,45,0	0/0:22,0:22:56.98:0,57,495	0/0:14,1:15:2.79:0,3,253	0/0:17,0:17:38.97:0,39,339	0/0:21,0:21:56.99:0,57,494	0/0:31,0:31:77.97:0,78,677	0/0:18,0:18:44.98:0,45,391	0/0:10,0:10:26.94:0,27,226
chr10	9198695	.	C	CGTGTGTGTGTGT	164.59	PASS	AB=0.919;AC=4;AF=0.071;AN=56;BaseQRankSum=5.261;DP=760;FS=43.930;HRun=0;HaplotypeScore=259.2630;InbreedingCoeff=-0.0619;MQ=57.69;MQ0=7;MQRankSum=0.152;QD=1.77;ReadPosRankSum=-5.263;VQSLOD=-0.2726;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,131,3107	0/1:7,0:7:1.94:2,0,228	0/1:20,0:11:0.28:0,0,221	0/0:28,0:11:8.04:0,8,175	0/0:19,0:20:49.94:0,50,1329	0/0:19,0:19:51.06:0,51,1218	0/0:40,0:40:96.02:0,96,2384	0/0:38,0:38:76.77:0,77,1227	0/1:12,7:23:99:143,0,178	0/0:29,0:29:55.92:0,56,1632	0/0:20,0:20:33.98:0,34,748	0/0:20,0:20:34.03:0,34,900	0/0:28,0:29:77.06:0,77,1849	0/0:19,0:18:46.37:0,46,1005	0/0:22,0:22:33.09:0,33,1461	0/0:16,0:16:45.07:0,45,906	0/0:53,0:53:99:0,127,2932	0/0:41,0:40:94.42:0,94,2999	0/0:18,0:18:46.72:0,47,682	0/0:20,0:20:56.99:0,57,1137	0/1:43,0:40:99:110,0,750	0/0:25,0:25:64.98:0,65,1287	0/0:28,0:28:51.62:0,52,1107	0/0:33,0:32:74.85:0,75,1477	0/0:31,0:31:61.22:0,61,1629	0/0:28,0:28:75.35:0,75,1402	0/0:25,0:24:56.18:0,56,1464	0/0:13,0:13:39.12:0,39,1105
chr10	9198696	.	C	CTG	773.70	PASS	AB=0.847;AC=9;AF=0.161;AN=56;BaseQRankSum=-3.020;DP=763;FS=2.382;HRun=0;HaplotypeScore=112.3599;InbreedingCoeff=0.2201;MQ=57.57;MQ0=7;MQRankSum=0.269;QD=3.49;ReadPosRankSum=-0.436;VQSLOD=2.7158;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:52:74.63:0,75,754	0/0:6,0:7:8.01:0,8,60	0/0:22,0:11:2.51:0,3,33	0/0:27,0:10:2.88:0,3,15	0/0:18,0:20:38.57:0,39,380	0/0:17,0:19:32.76:0,33,333	0/0:37,0:40:9.23:0,9,521	0/0:38,0:38:29.57:0,30,296	1/1:23,0:23:3:26,3,0	0/1:28,0:29:4.29:4,0,348	0/0:18,0:21:20.53:0,21,167	0/0:20,0:20:27.90:0,28,319	0/0:30,0:30:47.92:0,48,516	0/0:19,0:18:27.07:0,27,302	0/0:21,0:22:41.33:0,41,431	0/0:18,0:18:20.64:0,21,212	0/0:44,0:52:44.95:0,45,767	0/1:39,2:40:17.01:17,0,705	0/0:18,0:19:11.64:0,12,115	0/0:19,0:19:29.64:0,30,297	1/1:42,0:39:9.35:51,9,0	0/1:24,0:25:5.63:6,0,348	0/1:13,15:28:60.03:292,0,60	0/1:14,19:33:25.72:509,0,26	0/0:31,0:31:53.40:0,53,529	0/0:27,0:27:38.92:0,39,403	0/0:23,0:24:33.01:0,33,346	0/0:13,0:13:27.04:0,27,290
chr10	9202184	.	G	GGA	316.51	PASS	AB=0.944;AC=16;AF=0.381;AN=42;BaseQRankSum=-2.294;DP=461;FS=1.352;HRun=0;HaplotypeScore=67.5353;InbreedingCoeff=0.2930;MQ=59.26;MQ0=13;MQRankSum=-1.586;QD=2.21;ReadPosRankSum=-0.148;VQSLOD=1.0919;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/1:8,0:8:18.87:31,0,19	./.	./.	./.	./.	1/1:17,1:18:3.27:45,3,0	1/1:16,0:16:2.88:15,3,0	0/0:12,0:12:11.83:0,12,80	0/0:20,0:20:2.67:0,3,11	0/0:19,0:19:2.84:0,3,14	0/0:13,0:12:2.61:0,3,30	0/0:21,0:21:9.32:0,9,76	0/0:15,0:15:11.79:0,12,99	0/0:15,0:20:8.52:0,9,42	1/1:7,0:8:3:26,3,0	0/0:22,0:22:17.10:0,17,147	1/1:12,0:12:14.98:151,15,0	0/0:13,0:12:6.86:0,7,55	0/1:9,0:9:0:0,0,0	1/1:11,0:11:1.82:5,2,0	./.	./.	1/1:8,6:13:6.02:89,6,0	0/1:23,0:23:18.24:18,0,19	0/0:19,0:19:2.83:0,3,24	0/1:17,7:24:22.62:67,0,23	0/0:9,0:8:2.96:0,3,31
chr10	9202453	.	C	CT	567.75	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-3.738;DP=599;FS=1.808;HRun=8;HaplotypeScore=56.2442;InbreedingCoeff=0.9841;MQ=74.64;MQ0=0;MQRankSum=-1.610;QD=21.84;ReadPosRankSum=-1.143;VQSLOD=3.5015;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:87:0,87,784	0/0:14,0:14:35.99:0,36,323	0/0:14,0:14:14.89:0,15,197	0/0:11,0:11:20.76:0,21,178	0/0:28,0:28:78.01:0,78,707	0/0:21,0:21:60.03:0,60,549	0/0:17,0:17:45.02:0,45,412	0/0:38,0:38:99:0,99,898	1/1:2,15:17:36.11:412,36,0	0/0:26,0:26:72.03:0,72,659	0/0:21,0:21:54.02:0,54,494	0/0:24,0:24:66.03:0,66,604	0/0:22,0:22:51.02:0,51,467	0/0:15,0:15:42.01:0,42,381	0/0:19,0:19:54.02:0,54,491	0/0:28,0:27:78.03:0,78,709	0/0:25,0:25:57.01:0,57,516	0/0:19,0:19:47.99:0,48,433	0/0:19,0:19:47.99:0,48,426	0/0:23,0:23:60.01:0,60,545	1/1:1,8:9:24.07:277,24,0	0/0:23,0:23:60.02:0,60,549	0/0:23,0:23:45:0,45,412	0/0:21,0:21:48.02:0,48,439	0/0:23,0:23:63.02:0,63,577	0/0:31,0:31:87.03:0,87,792	0/0:27,0:27:69.02:0,69,627	0/0:11,0:11:18:0,18,165
chr10	9203156	.	CCTCAT	C	462.15	PASS	AB=0.545;AC=1;AF=0.018;AN=56;BaseQRankSum=4.230;DP=413;FS=12.051;HRun=0;HaplotypeScore=75.8057;InbreedingCoeff=0.4311;MQ=86.87;MQ0=0;MQRankSum=-2.866;QD=38.51;ReadPosRankSum=2.220;VQSLOD=2.8552;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:42.14:0,42,1255	0/0:6,0:6:18.06:0,18,558	0/0:14,0:14:42.14:0,42,1228	0/0:16,0:15:36.12:0,36,1024	0/0:17,0:17:51.18:0,51,1538	0/0:19,0:19:57.20:0,57,1633	0/0:15,0:15:45.15:0,45,1348	0/0:32,0:32:87.30:0,87,2645	0/1:2,10:12:3.47:537,0,3	0/0:22,0:22:63.22:0,63,1890	0/0:13,0:13:39.13:0,39,1209	0/0:12,0:12:36.12:0,36,1116	0/0:16,0:16:48.16:0,48,1457	0/0:12,0:12:36.12:0,36,1092	0/0:20,0:20:60.21:0,60,1860	0/0:10,0:10:30.10:0,30,910	0/0:19,0:19:54.19:0,54,1595	0/0:15,0:15:42.14:0,42,1277	0/0:9,0:9:24.08:0,24,744	0/0:17,0:17:51.18:0,51,1579	0/0:11,0:11:33.11:0,33,1023	0/0:12,0:12:36.12:0,36,1116	0/0:14,0:14:39.13:0,39,1198	0/0:5,0:5:15.05:0,15,459	0/0:5,0:5:15.05:0,15,465	0/0:17,0:17:51.18:0,51,1557	0/0:18,0:18:54.19:0,54,1670	0/0:21,0:21:57.20:0,57,1735
chr10	9205909	.	C	CTGTTTTGTTTTGTTTTGTTT	2576.31	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.872;DP=791;FS=0.000;HRun=0;HaplotypeScore=396.0112;InbreedingCoeff=0.8965;MQ=74.46;MQ0=0;MQRankSum=-4.804;QD=80.51;ReadPosRankSum=-2.528;VQSLOD=1.9172;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:90.31:0,90,4351	0/0:15,0:15:24.07:0,24,928	0/0:37,0:31:26.92:0,27,831	0/0:39,0:32:6.35:0,6,752	0/0:25,0:26:42.14:0,42,1940	0/0:21,0:21:48.16:0,48,2125	0/0:21,0:21:39.13:0,39,1744	0/0:25,0:25:21.06:0,21,751	1/1:25,4:32:33.58:2671,34,0	0/0:27,0:27:54.17:0,54,2492	0/0:19,0:19:36.10:0,36,1341	0/0:36,0:36:75.26:0,75,3415	0/0:20,0:20:42.14:0,42,1962	0/0:26,0:26:51.17:0,51,2522	0/0:31,0:31:66.21:0,66,2770	0/0:23,0:23:45.14:0,45,1985	0/0:20,0:21:30.59:0,31,2098	0/0:26,0:26:51.17:0,51,2515	0/0:24,0:24:33.07:0,33,1047	0/0:32,0:32:63.20:0,63,2918	0/0:17,0:17:30.10:0,30,1554	0/0:35,0:35:42.13:0,42,1722	0/0:17,0:17:18.05:0,18,769	0/0:36,0:36:73.95:0,74,3360	0/0:46,0:46:75.21:0,75,3180	0/0:43,0:43:84.26:0,84,3919	0/0:27,0:27:42.12:0,42,1790	0/0:18,0:18:51.17:0,51,2513
chr10	9206809	.	G	GA	6015.82	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-15.950;DP=677;FS=17.918;HRun=6;HaplotypeScore=63.7348;InbreedingCoeff=0.9997;MQ=83.92;MQ0=0;MQRankSum=0.303;QD=33.61;ReadPosRankSum=1.706;VQSLOD=3.1465;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,126,1277	0/0:9,0:9:27.06:0,27,275	0/0:24,0:24:54.06:0,54,529	0/0:21,0:21:36.18:0,36,424	0/0:21,0:21:60.14:0,60,612	0/0:25,0:25:69.11:0,69,688	0/0:15,0:15:36.08:0,36,367	0/0:32,0:32:84.17:0,84,848	1/1:0,18:18:54.17:679,54,0	1/1:0,29:29:87.28:1088,87,0	1/1:0,25:25:75.24:939,75,0	0/0:25,0:25:75.17:0,75,765	0/0:21,0:21:63.14:0,63,643	0/0:31,0:31:90.17:0,90,903	1/1:3,37:40:99:1245,99,0	0/0:32,1:33:58.44:0,58,896	0/0:22,0:22:60.12:0,60,605	0/0:16,0:16:48.11:0,48,490	0/0:28,0:28:78.17:0,78,790	0/0:26,0:26:69.15:0,69,704	1/1:2,17:19:45.14:566,45,0	0/0:12,0:12:33.07:0,33,337	1/1:3,14:17:42.13:517,42,0	1/1:2,29:31:78.25:981,78,0	0/0:23,0:23:38.34:0,38,576	0/0:26,0:26:72.15:0,72,728	0/0:29,0:29:78.05:0,78,753	0/0:15,0:15:42.09:0,42,428
chr10	9207019	.	GATGAATGAATGA	G	1325.14	PASS	AB=0.965;AC=12;AF=0.214;AN=56;BaseQRankSum=-3.645;DP=588;FS=0.000;HRun=0;HaplotypeScore=261.1605;InbreedingCoeff=0.0822;MQ=71.70;MQ0=1;MQRankSum=-1.257;QD=8.08;ReadPosRankSum=-4.104;VQSLOD=1.4660;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:93.30:0,93,4299	0/0:4,0:4:9.01:0,9,101	0/0:14,0:13:25.45:0,25,677	0/0:15,0:14:30.06:0,30,795	0/0:37,0:37:99:0,105,4550	0/0:24,0:24:60.18:0,60,2782	0/0:21,0:21:57.11:0,57,2420	0/0:38,0:38:99:0,105,4483	0/0:26,0:26:69.22:0,69,2843	0/0:36,0:36:99:0,102,4893	0/0:21,0:21:60.18:0,60,2570	0/1:11,0:11:99:230,0,99	0/1:13,0:13:99:212,0,276	0/1:16,0:16:82.62:83,0,392	0/0:31,0:31:81.24:0,81,3326	0/0:22,0:22:42.13:0,42,2013	0/1:20,0:20:99:285,0,227	0/0:24,0:24:54.19:0,54,2554	0/1:11,7:18:99:195,0,191	0/1:25,0:25:50.63:51,0,644	1/1:11,0:11:3.03:81,3,0	1/1:6,0:6:12.01:154,12,0	0/0:23,0:23:57.12:0,57,2567	0/0:12,0:12:33.11:0,33,1584	0/0:27,0:27:66.23:0,66,3382	0/1:22,0:22:74.58:75,0,773	0/1:22,0:22:99:116,0,471	0/0:9,0:9:27.08:0,27,308
chr10	9207025	.	TGAA	T	2013.69	PASS	AB=0.676;AC=13;AF=0.232;AN=56;BaseQRankSum=13.088;DP=561;FS=24.039;HRun=0;HaplotypeScore=154.3576;InbreedingCoeff=0.2381;MQ=67.54;MQ0=1;MQRankSum=-10.453;QD=12.83;ReadPosRankSum=2.681;VQSLOD=1.8575;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:93.32:0,93,2078	1/1:0,3:3:2.14:50,2,0	0/0:11,0:10:24.48:0,24,483	0/0:12,0:11:30.10:0,30,518	0/0:35,0:35:99:0,105,2198	0/0:25,0:25:60.20:0,60,1345	0/0:20,0:20:57.19:0,57,1194	0/0:42,0:42:99:0,126,2733	0/0:25,0:25:69.22:0,69,1460	0/0:34,0:34:99:0,102,2329	0/0:20,0:20:60.20:0,60,1295	0/1:9,3:12:44.40:105,0,44	0/1:8,6:14:8.44:196,0,8	0/1:5,10:15:19.48:178,0,19	0/0:27,0:27:81.26:0,81,1762	0/0:19,0:19:41.92:0,42,919	0/1:11,7:18:38.17:154,0,38	0/0:22,0:22:54.19:0,54,1241	0/1:13,7:20:99:188,0,118	0/1:6,17:23:11.68:270,0,12	0/0:4,6:10:0.85:0,1,22	0/0:4,0:4:9.70:0,10,44	0/0:22,0:22:57.19:0,57,1232	0/0:13,0:13:33.11:0,33,732	0/0:26,0:26:66.23:0,66,1533	0/1:7,15:22:90.78:430,0,91	1/1:9,12:21:19.87:374,20,0	1/1:0,9:9:20.17:231,20,0
chr10	9207029	.	TG	T	712.87	PASS	AB=0.657;AC=11;AF=0.196;AN=56;BaseQRankSum=12.583;DP=552;FS=10.376;HRun=1;HaplotypeScore=138.8121;InbreedingCoeff=-0.0519;MQ=65.22;MQ0=1;MQRankSum=-11.673;QD=4.37;ReadPosRankSum=3.430;VQSLOD=-0.2481;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:90.31:0,90,1402	0/1:0,3:3:10.15:20,0,10	0/0:9,0:8:18.72:0,19,307	0/0:11,0:10:25.28:0,25,327	0/0:31,0:31:93.29:0,93,1433	0/0:22,0:22:54.18:0,54,841	0/0:19,0:19:51.16:0,51,775	0/0:41,0:41:99:0,123,1942	0/0:25,0:25:66.20:0,66,981	0/0:35,0:35:99:0,105,1642	0/0:18,0:18:54.17:0,54,822	0/1:11,3:14:49.76:50,0,52	0/1:8,6:14:55.52:89,0,56	0/1:3,10:13:41.17:74,0,41	0/0:25,0:25:72.25:0,72,1132	0/0:18,0:18:39.12:0,39,590	0/1:12,7:19:50.74:51,0,149	0/0:22,0:22:54.18:0,54,846	0/1:15,7:22:65:65,0,162	0/1:7,17:24:93.15:93,0,138	0/0:5,0:11:9.53:0,10,59	0/0:3,0:3:1.13:0,1,16	0/0:21,0:21:51.17:0,51,795	0/0:14,0:14:33.08:0,33,468	0/0:27,0:27:66.20:0,66,1012	0/1:9,15:24:99:168,0,129	0/1:9,12:21:38.33:145,0,38	1/1:0,9:9:7.21:107,7,0
chr10	9207034	.	G	GAATT	13431.42	PASS	AB=0.975;AC=40;AF=0.769;AN=52;BaseQRankSum=-12.958;DP=546;FS=8.000;HRun=0;HaplotypeScore=123.6599;InbreedingCoeff=0.1807;MQ=61.51;MQ0=1;MQRankSum=11.311;QD=25.93;ReadPosRankSum=-0.742;VQSLOD=3.9916;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:16,24:40:23.18:1084,23,0	0/0:4,0:4:4.72:0,5,18	./.	./.	1/1:6,22:31:69.09:1429,69,0	1/1:5,18:23:42.14:1036,42,0	1/1:8,10:19:21.07:481,21,0	1/1:20,23:43:68.98:909,69,0	1/1:7,16:24:36.12:888,36,0	1/1:9,23:32:46.48:1544,46,0	1/1:7,13:20:32.98:703,33,0	0/1:11,0:11:11.28:75,0,11	0/1:13,0:13:24.90:25,0,54	0/1:13,0:13:5.04:5,0,59	1/1:11,15:26:36.12:888,36,0	1/1:2,15:18:30.10:740,30,0	0/1:19,0:19:61.48:61,0,92	1/1:7,17:24:32.98:814,33,0	0/1:24,0:24:17.76:144,0,18	0/1:23,0:23:37.37:37,0,68	1/1:10,0:10:15.46:88,15,0	1/1:2,0:2:3:28,3,0	1/1:6,14:20:30.06:686,30,0	1/1:1,11:12:24.08:592,24,0	1/1:7,21:28:42.14:1036,42,0	0/1:18,5:24:84.11:140,0,84	0/1:19,0:19:0.88:1,0,83	0/0:9,0:9:19.27:0,19,70
chr10	9207703	.	GA	G	2655.36	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=11.620;DP=594;FS=0.856;HRun=7;HaplotypeScore=56.9744;InbreedingCoeff=0.9992;MQ=75.63;MQ0=0;MQRankSum=-0.976;QD=24.59;ReadPosRankSum=2.295;VQSLOD=4.0398;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:69.18:0,69,829	0/0:8,0:8:24.08:0,24,302	0/0:18,0:18:32.29:0,32,418	0/0:11,0:11:30.01:0,30,322	0/0:28,0:28:75.23:0,75,930	0/0:26,0:26:63.18:0,63,768	0/0:21,0:21:60.19:0,60,755	0/0:27,0:27:75.18:0,75,888	0/0:22,0:22:60.19:0,60,755	1/1:0,19:19:57.10:567,57,0	1/1:1,17:18:51.11:520,51,0	0/0:18,0:18:51.15:0,51,618	0/0:15,0:15:39.12:0,39,490	0/0:21,0:21:63.20:0,63,793	1/1:1,26:27:63.14:642,63,0	0/0:20,0:20:54.17:0,54,671	0/0:22,0:22:54.12:0,54,649	0/0:23,0:23:63.18:0,63,777	0/0:16,0:16:45.05:0,45,518	0/0:24,0:24:66.21:0,66,830	0/0:23,0:22:63.20:0,63,791	0/0:27,0:27:69.18:0,69,830	1/1:1,25:26:60.14:612,60,0	1/1:1,17:18:48.11:490,48,0	0/0:26,0:25:78.25:0,78,980	0/0:27,0:27:81.25:0,81,1008	0/0:24,0:24:72.22:0,72,894	0/0:14,0:14:33.11:0,33,414
chr10	9207881	.	TG	T	530.23	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.157;DP=617;FS=0.000;HRun=1;HaplotypeScore=85.2242;InbreedingCoeff=0.9968;MQ=91.00;MQ0=0;MQRankSum=-4.754;QD=24.10;ReadPosRankSum=0.065;VQSLOD=3.4350;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,102,1601	0/0:8,0:8:24.08:0,24,384	0/0:25,0:25:75.18:0,75,1132	0/0:25,0:25:75.14:0,75,1071	0/0:17,0:17:51.07:0,51,722	0/0:16,0:16:48.15:0,48,744	0/0:27,0:27:81.26:0,81,1268	0/0:27,0:27:81.26:0,81,1253	0/0:22,0:22:66.23:0,66,1055	0/0:22,0:22:60.20:0,60,939	0/0:14,0:14:39.13:0,39,623	0/0:27,0:27:69.24:0,69,1103	0/0:22,0:22:57.19:0,57,910	0/0:20,0:20:60.20:0,60,959	0/0:23,0:23:66.21:0,66,1032	0/0:30,0:29:81.28:0,81,1286	0/0:34,0:34:96.27:0,96,1482	0/0:23,0:23:66.21:0,66,1031	0/0:16,0:16:48.16:0,48,767	0/0:22,0:22:63.19:0,63,956	1/1:0,22:22:48.07:625,48,0	0/0:19,0:19:51.07:0,51,712	0/0:15,0:15:42.14:0,42,668	0/0:26,0:26:78.27:0,78,1246	0/0:21,0:21:54.18:0,54,862	0/0:25,0:25:75.24:0,75,1151	0/0:24,0:24:69.22:0,69,1072	0/0:9,0:9:27.09:0,27,428
chr10	9207939	.	A	AT	26776.93	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-10.230;DP=710;FS=0.000;HRun=3;HaplotypeScore=71.0843;InbreedingCoeff=0.9985;MQ=88.91;MQ0=1;MQRankSum=-10.281;QD=41.71;ReadPosRankSum=3.693;VQSLOD=4.1206;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,36:36:99:1577,99,0	1/1:0,10:10:24.08:384,24,0	0/0:22,0:22:60.67:0,61,821	0/0:28,0:28:69.01:0,69,1043	1/1:0,26:26:56.81:895,57,0	1/1:0,13:13:39.13:624,39,0	1/1:4,25:29:69.24:1103,69,0	1/1:2,27:28:72.22:1099,72,0	0/0:18,0:18:51.16:0,51,693	1/1:0,21:21:60.19:931,60,0	1/1:1,9:10:24.08:365,24,0	1/1:0,31:31:72.25:1151,72,0	1/1:0,30:30:81.27:1287,81,0	1/1:1,21:22:54.18:863,54,0	1/1:1,27:26:75.26:1199,75,0	1/1:1,23:23:57.19:911,57,0	1/1:1,49:50:99:2206,138,0	1/1:0,21:21:57.19:911,57,0	1/1:1,28:29:87.27:1350,87,0	1/1:0,26:26:75.21:1170,75,0	1/1:1,26:27:66.20:1052,66,0	1/1:0,26:26:66.22:1042,66,0	1/1:0,22:22:63.21:1007,63,0	1/1:0,31:31:87.30:1390,87,0	1/1:2,28:30:69.24:1103,69,0	1/1:0,28:27:84.29:1333,84,0	1/1:0,27:27:72.72:1152,73,0	1/1:0,16:16:42.14:671,42,0
chr10	9208510	.	G	GA	8143.76	PASS	AB=1.000;AC=49;AF=0.875;AN=56;BaseQRankSum=-3.754;DP=472;FS=2.534;HRun=9;HaplotypeScore=57.6112;InbreedingCoeff=0.7990;MQ=73.55;MQ0=2;MQRankSum=-4.389;QD=18.72;ReadPosRankSum=1.046;VQSLOD=5.2100;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,20:22:50.97:545,51,0	1/1:4,0:9:13.58:64,14,0	0/0:18,0:17:6.63:0,7,219	0/1:8,0:7:4.01:4,0,20	1/1:4,26:30:75.16:816,75,0	1/1:3,19:22:54.15:597,54,0	1/1:3,12:16:29.91:313,30,0	1/1:5,23:28:69.19:763,69,0	0/0:14,0:14:38.99:0,39,339	1/1:2,9:11:27.07:295,27,0	1/1:3,7:10:21.06:232,21,0	1/1:7,0:14:31.19:159,31,0	1/1:1,0:13:19.89:99,20,0	1/1:3,1:20:52.55:277,53,0	1/1:2,17:20:44.18:525,44,0	1/1:4,8:12:24.06:266,24,0	1/1:4,2:30:62.83:350,63,0	1/1:4,14:17:30.08:332,30,0	1/1:4,1:24:52.63:266,53,0	1/1:3,1:14:23.74:121,24,0	0/0:1,0:5:6.11:0,6,18	1/1:4,0:13:20.52:107,21,0	1/1:0,16:15:35.91:398,36,0	1/1:4,11:15:39.11:431,39,0	1/1:2,24:26:66.18:730,66,0	1/1:2,1:19:45.58:244,46,0	1/1:3,2:16:28.56:152,29,0	1/1:0,0:8:11.32:55,11,0
chr10	9208676	.	GA	G	9608.50	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=1.189;DP=532;FS=16.400;HRun=10;HaplotypeScore=61.0470;InbreedingCoeff=0.9811;MQ=75.95;MQ0=0;MQRankSum=-3.046;QD=20.98;ReadPosRankSum=2.811;VQSLOD=4.2366;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,27:34:25.13:595,25,0	1/1:0,9:9:26.99:234,27,0	0/0:24,0:22:27.69:0,28,303	0/0:21,1:20:8.76:0,9,308	1/1:4,24:28:38.88:566,39,0	1/1:4,19:23:53.97:469,54,0	1/1:3,15:18:35.99:313,36,0	1/1:9,14:23:41.96:364,42,0	0/0:14,0:14:39.10:0,39,424	1/1:1,26:27:71.97:625,72,0	1/1:2,16:18:44.98:391,45,0	1/1:1,15:17:44.01:371,44,0	1/1:3,14:18:44.03:371,44,0	1/1:5,18:23:53.98:468,54,0	1/1:1,17:18:41.99:365,42,0	1/1:1,21:22:50.75:442,51,0	1/1:4,15:19:30.06:350,30,0	1/1:2,18:20:47.99:417,48,0	1/1:1,16:17:47.96:410,48,0	1/1:1,16:17:44.98:390,45,0	0/0:14,0:14:33.09:0,33,365	1/1:1,14:15:38.99:339,39,0	1/1:1,17:18:47.99:417,48,0	1/1:1,16:17:41.99:365,42,0	1/1:1,16:17:44.99:391,45,0	1/1:0,15:15:44.97:385,45,0	1/1:1,12:13:35.99:313,36,0	1/1:1,11:12:29.98:260,30,0
chr10	9208746	.	CTGTG	C	1252.21	PASS	AB=0.978;AC=18;AF=0.360;AN=50;BaseQRankSum=-0.903;DP=604;FS=3.766;HRun=0;HaplotypeScore=121.8480;InbreedingCoeff=0.6546;MQ=63.93;MQ0=16;MQRankSum=0.162;QD=5.47;ReadPosRankSum=0.562;VQSLOD=2.5807;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:34,1:35:5.73:92,6,0	0/0:8,0:8:6.02:0,6,87	./.	./.	0/1:18,0:18:7.27:23,0,7	1/1:11,1:13:12.03:159,12,0	0/1:21,0:22:23.43:23,0,36	0/0:25,0:25:0:0,0,0	0/0:25,0:26:42.14:0,42,668	0/0:26,0:25:0:0,0,0	./.	0/0:21,0:21:8.89:0,9,133	0/0:25,0:26:12.04:0,12,201	0/0:14,0:14:12.04:0,12,172	1/1:19,6:26:24.07:348,24,0	1/1:22,2:25:12.03:161,12,0	0/0:27,0:30:42.60:0,43,695	1/1:24,1:26:13.72:149,14,0	0/0:12,0:11:12.03:0,12,178	0/0:17,0:18:18.06:0,18,282	0/0:22,0:21:11.98:0,12,137	0/0:18,0:19:14.45:0,14,138	1/1:18,0:17:6:72,6,0	1/1:27,3:29:18.06:275,18,0	1/1:14,1:15:8.83:127,9,0	0/0:24,0:24:24.06:0,24,303	0/0:15,0:15:18.06:0,18,301	0/0:6,0:5:2.99:0,3,24
chr10	9209406	.	G	GCTAA	30976.98	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-10.111;DP=703;FS=5.384;HRun=0;HaplotypeScore=84.5570;InbreedingCoeff=0.9564;MQ=66.30;MQ0=0;MQRankSum=-8.117;QD=49.41;ReadPosRankSum=4.472;VQSLOD=5.7053;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,23:26:36.12:895,36,0	1/1:0,12:12:21.07:571,21,0	0/0:29,0:29:68.40:0,68,1293	0/0:22,0:22:51.05:0,51,875	1/1:0,17:19:29.64:759,30,0	1/1:3,20:25:45.11:1169,45,0	1/1:1,23:27:48.16:1244,48,0	1/1:6,30:40:99:2344,108,0	0/0:25,0:25:75.24:0,75,1409	1/1:3,24:27:63.19:1456,63,0	1/1:0,11:13:20.99:450,21,0	1/1:1,23:25:36.12:985,36,0	1/1:2,28:33:54.18:1411,54,0	1/1:1,33:34:75.26:2036,75,0	1/1:1,30:32:72.25:1944,72,0	1/1:0,20:21:45.15:1218,45,0	1/1:2,20:22:33.11:873,33,0	1/1:2,6:8:21.07:560,21,0	1/1:4,26:34:99:2316,99,0	1/1:0,22:22:51.11:1269,51,0	1/1:1,34:36:66.18:1741,66,0	1/1:1,10:13:18.06:474,18,0	1/1:1,10:13:6.01:165,6,0	1/1:1,27:29:45.15:1227,45,0	1/1:1,28:32:48.59:1226,49,0	1/1:1,34:36:93.29:2161,93,0	1/1:3,25:30:54.07:1417,54,0	1/1:0,18:18:39.13:1065,39,0
chr10	9209603	.	A	AG	13723.89	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=10.353;DP=490;FS=17.646;HRun=2;HaplotypeScore=141.2746;InbreedingCoeff=0.9740;MQ=84.07;MQ0=0;MQRankSum=-11.726;QD=32.68;ReadPosRankSum=4.900;VQSLOD=2.9101;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,11:18:33.11:462,33,0	1/1:5,8:12:30.06:396,30,0	0/0:23,0:23:69.20:0,69,834	0/0:24,0:24:69.17:0,69,804	1/1:10,21:31:55.35:754,55,0	1/1:1,15:16:39.13:545,39,0	1/1:5,10:15:39.12:531,39,0	1/1:8,15:23:54.17:750,54,0	0/0:23,0:23:63.19:0,63,769	1/1:1,24:25:69.23:969,69,0	1/1:3,23:26:63.21:868,63,0	1/1:3,12:15:39.13:544,39,0	1/1:7,12:19:39.09:519,39,0	1/1:2,11:12:33.11:452,33,0	1/1:2,8:10:24.07:334,24,0	1/1:0,8:8:21.07:295,21,0	1/1:5,11:16:36.07:465,36,0	1/1:3,11:14:33.06:444,33,0	1/1:3,6:9:18.06:253,18,0	1/1:1,18:18:45.07:573,45,0	1/1:3,6:9:12.72:206,13,0	1/1:1,12:13:27:347,27,0	1/1:2,25:27:72.24:984,72,0	1/1:3,15:18:45.15:622,45,0	1/1:2,22:24:63.10:825,63,0	1/1:1,17:18:51.15:716,51,0	1/1:0,17:17:51.17:707,51,0	1/1:0,4:4:12.04:162,12,0
chr10	9209607	.	T	TACC	24369.22	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=7.396;DP=501;FS=22.278;HRun=0;HaplotypeScore=130.0206;InbreedingCoeff=0.9821;MQ=84.01;MQ0=0;MQRankSum=-12.049;QD=56.41;ReadPosRankSum=2.358;VQSLOD=4.4518;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,11:19:42.10:881,42,0	1/1:5,8:12:30.08:618,30,0	0/0:23,0:23:66.09:0,66,1109	0/0:25,0:25:69.12:0,69,1050	1/1:4,24:32:63.19:1337,63,0	1/1:6,12:18:51.16:1075,51,0	1/1:8,11:19:54.15:1119,54,0	1/1:9,15:24:60.20:1351,60,0	0/0:21,0:21:57.12:0,57,940	1/1:4,21:25:72.23:1562,72,0	1/1:3,21:24:69.24:1499,69,0	1/1:5,12:17:42.08:877,42,0	1/1:3,12:15:45.13:996,45,0	1/1:3,11:13:36.08:773,36,0	1/1:6,7:13:39.07:767,39,0	1/1:6,6:12:30.09:641,30,0	1/1:2,11:13:35.33:775,35,0	1/1:2,10:12:36.12:802,36,0	1/1:3,6:10:30.01:548,30,0	1/1:4,14:18:51.17:1125,51,0	1/1:2,6:8:15.05:285,15,0	1/1:6,10:16:33.11:721,33,0	1/1:7,21:28:75.23:1584,75,0	1/1:2,13:15:39.11:798,39,0	1/1:4,20:24:69.24:1589,69,0	1/1:3,14:19:57.20:1300,57,0	1/1:2,17:19:54.17:1167,54,0	1/1:2,2:4:11.77:180,12,0
chr10	9209712	.	A	ATCTCTCTCTCTC	5643.89	PASS	AB=0.912;AC=41;AF=0.891;AN=46;BaseQRankSum=-1.949;DP=568;FS=1.176;HRun=0;HaplotypeScore=181.3656;InbreedingCoeff=0.3159;MQ=64.98;MQ0=26;MQRankSum=-0.452;QD=13.50;ReadPosRankSum=3.135;VQSLOD=3.2065;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	1/1:8,0:6:6:97,6,0	0/1:48,0:20:0.20:0,0,198	0/0:70,0:38:13.94:0,14,372	1/1:18,0:18:6.02:193,6,0	1/1:28,0:25:13.30:360,13,0	1/1:23,0:21:6:73,6,0	1/1:31,0:30:33.95:762,34,0	1/1:17,0:17:9.03:171,9,0	1/1:19,0:18:24.08:727,24,0	1/1:17,0:16:6.02:98,6,0	1/1:10,0:9:3.01:35,3,0	1/1:10,0:10:9.03:288,9,0	./.	./.	1/1:15,0:13:15.02:327,15,0	1/1:15,0:15:6.02:220,6,0	0/1:9,5:14:65.03:112,0,65	1/1:20,0:17:15.05:385,15,0	./.	1/1:15,0:14:11.84:290,12,0	./.	1/1:21,0:21:3.01:61,3,0	0/1:11,0:11:0:0,0,0	1/1:23,0:23:5.03:191,5,0	1/1:29,0:29:30.10:900,30,0	1/1:10,0:10:3.01:48,3,0	1/1:16,0:15:15.01:306,15,0
chr10	9209720	.	C	CTCTC	2022.42	PASS	AB=1.000;AC=41;AF=0.820;AN=50;BaseQRankSum=-0.117;DP=541;FS=4.960;HRun=0;HaplotypeScore=124.4583;InbreedingCoeff=0.3334;MQ=55.46;MQ0=30;MQRankSum=-0.820;QD=5.31;ReadPosRankSum=1.427;VQSLOD=2.3763;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:21:0:1,0,0	1/1:9,0:7:5.49:33,5,0	0/0:46,0:18:1.53:0,2,85	0/0:62,0:30:14.53:0,15,153	1/1:16,0:16:6.02:96,6,0	1/1:24,0:21:12.49:164,12,0	1/1:22,0:20:6:73,6,0	1/1:29,0:28:10.80:105,11,0	1/1:11,4:16:2.74:50,3,0	1/1:17,0:15:23.63:283,24,0	1/1:16,0:14:6.02:98,6,0	1/1:9,0:8:3.01:35,3,0	1/1:9,0:9:9.03:107,9,0	./.	./.	1/1:13,0:11:16.27:189,16,0	1/1:14,0:14:3.01:41,3,0	0/1:13,0:13:18.23:34,0,18	1/1:17,0:14:10.28:60,10,0	./.	1/1:15,0:13:12.03:168,12,0	0/1:16,0:14:0:0,0,0	1/1:22,0:22:3.01:45,3,0	0/0:10,0:10:0.47:0,0,1	1/1:25,0:25:5.97:56,6,0	1/1:28,0:28:27.63:339,28,0	1/1:11,0:11:3.01:48,3,0	1/1:16,0:15:13.80:115,14,0
chr10	9209738	.	CTGTGTGTGTGTGTG	C	769.37	PASS	AB=0.858;AC=18;AF=0.409;AN=44;BaseQRankSum=-2.550;DP=450;FS=6.464;HRun=0;HaplotypeScore=150.6373;InbreedingCoeff=-0.0964;MQ=45.36;MQ0=38;MQRankSum=-2.450;QD=3.66;ReadPosRankSum=-1.981;VQSLOD=2.0560;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:18,0:15:0.31:0,0,0	0/0:6,0:4:2.84:0,3,14	./.	0/0:39,0:17:0:0,0,0	./.	0/0:16,0:14:2.99:0,3,25	0/0:14,7:19:2.88:0,3,15	0/1:27,0:25:6.91:59,0,7	0/0:20,0:20:21.07:0,21,1045	0/1:13,0:17:42.39:42,0,169	./.	./.	0/1:6,2:8:42.08:93,0,42	./.	./.	0/0:11,0:10:5.91:0,6,56	1/1:11,0:12:2.97:84,3,0	0/1:9,0:8:15.05:15,0,16	0/1:12,1:11:17.88:109,0,18	0/0:15,0:20:0:0,0,0	0/0:23,0:19:7.33:0,7,190	1/1:10,0:14:0.99:2,1,0	0/1:14,1:18:0:0,0,0	1/1:5,0:10:0.47:1,0,0	0/1:10,7:19:37.75:38,0,42	0/1:16,0:19:77.05:227,0,77	1/1:7,1:7:2.47:116,2,0	0/1:9,0:10:28.36:98,0,28
chr10	9209875	.	A	ATTTGTTTG	7020.54	PASS	AB=1.000;AC=23;AF=0.426;AN=54;BaseQRankSum=-5.902;DP=608;FS=16.239;HRun=0;HaplotypeScore=148.1879;InbreedingCoeff=0.8707;MQ=67.59;MQ0=0;MQRankSum=-7.294;QD=28.77;ReadPosRankSum=-4.431;VQSLOD=2.2615;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:22:33.09:0,33,764	1/1:5,6:15:8.95:232,9,0	0/0:31,0:28:21.54:0,22,471	0/0:19,0:19:7.65:0,8,184	0/0:26,0:26:62.78:0,63,1213	0/0:22,0:22:54.15:0,54,1225	0/0:21,0:21:33.83:0,34,814	0/0:24,0:24:44.82:0,45,844	0/0:25,0:25:48.15:0,48,1164	0/0:36,0:36:66.16:0,66,1512	0/0:23,0:23:44.82:0,45,991	1/1:8,2:14:12.04:396,12,0	1/1:7,10:21:18.06:749,18,0	1/1:7,8:17:3.01:125,3,0	0/0:21,0:21:42.14:0,42,1028	0/0:15,0:15:29.94:0,30,590	1/1:13,4:20:5.35:144,5,0	0/1:19,0:19:4.65:5,0,756	1/1:6,6:14:23.90:482,24,0	1/1:7,14:25:29.69:1021,30,0	1/1:18,10:35:14.81:396,15,0	1/1:6,12:21:28.25:961,28,0	0/0:11,0:11:26.89:0,27,448	0/0:31,0:31:78.25:0,78,1871	0/0:34,0:34:78.20:0,78,1565	1/1:6,7:24:38.86:1282,39,0	1/1:4,10:18:30.10:1228,30,0	./.
chr10	9209919	.	GGCTT	G	782.29	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.153;DP=619;FS=2.054;HRun=0;HaplotypeScore=117.6560;InbreedingCoeff=0.9823;MQ=73.83;MQ0=0;MQRankSum=-1.333;QD=34.01;ReadPosRankSum=1.919;VQSLOD=3.9937;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:62.83:0,63,1442	0/0:10,0:9:18.01:0,18,401	0/0:28,0:28:60.21:0,60,1422	0/0:16,0:16:42.01:0,42,1003	0/0:25,0:25:69.23:0,69,1597	0/0:20,0:20:54.18:0,54,1309	0/0:18,0:18:45.15:0,45,1056	0/0:40,0:40:99:0,111,2683	1/1:4,19:23:51.15:877,51,0	0/0:35,0:35:84.29:0,84,2074	0/0:21,0:21:48.15:0,48,1083	0/0:14,0:14:33.11:0,33,846	0/0:21,0:21:48.16:0,48,1167	0/0:12,0:12:21.07:0,21,529	0/0:20,0:20:45.15:0,45,1102	0/0:19,0:19:51.18:0,51,1298	0/0:18,0:18:48.16:0,48,1210	0/0:26,0:26:69.20:0,69,1657	0/0:16,0:16:45.15:0,45,990	0/0:18,0:18:33.11:0,33,825	0/0:23,0:23:27.09:0,27,612	0/0:19,0:19:33.04:0,33,718	0/0:22,0:22:63.16:0,63,1468	0/0:31,0:31:84.29:0,84,2083	0/0:33,0:33:87.30:0,87,2202	0/0:30,0:30:68.24:0,68,1565	0/0:29,0:29:69.24:0,69,1710	0/0:7,0:7:21.07:0,21,539
chr10	9210896	.	A	AT	7855.82	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=-5.421;DP=498;FS=8.186;HRun=8;HaplotypeScore=63.3995;InbreedingCoeff=0.8916;MQ=67.07;MQ0=0;MQRankSum=-1.236;QD=29.10;ReadPosRankSum=-0.648;VQSLOD=4.6696;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,13:14:39.12:450,39,0	0/0:4,0:4:9:0,9,82	0/0:10,0:9:18:0,18,165	0/1:7,0:7:53.82:54,0,67	1/1:4,29:33:84.25:969,84,0	1/1:3,15:18:36.11:415,36,0	1/1:0,16:16:42.12:485,42,0	1/1:3,21:24:63.16:707,63,0	0/0:13,1:14:4.40:0,4,295	1/1:3,24:27:72.16:804,72,0	1/1:4,17:21:51.15:587,51,0	0/0:18,0:18:48:0,48,435	0/0:16,0:16:42.02:0,42,384	0/0:20,0:20:60.01:0,60,542	1/1:0,11:11:33.10:381,33,0	1/1:0,10:10:30.09:346,30,0	0/0:15,0:15:42.01:0,42,383	1/1:3,28:31:79.48:901,79,0	0/0:15,0:15:39.01:0,39,357	0/0:27,0:27:78.04:0,78,714	1/1:1,2:3:9.02:95,9,0	0/0:10,0:10:24.01:0,24,220	1/1:2,18:20:51.15:588,51,0	1/1:0,16:16:42.12:485,42,0	1/1:2,17:19:51.15:589,51,0	0/0:21,1:22:25.41:0,25,487	0/0:29,0:29:78.04:0,78,713	0/0:28,0:28:78.04:0,78,714
chr10	9212079	.	T	TCTATGTAAAC	47966.91	PASS	AB=0.958;AC=37;AF=0.661;AN=56;BaseQRankSum=-6.720;DP=623;FS=20.070;HRun=0;HaplotypeScore=176.3123;InbreedingCoeff=0.9180;MQ=79.07;MQ0=0;MQRankSum=-18.228;QD=111.81;ReadPosRankSum=2.410;VQSLOD=3.8216;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:90.29:0,90,2828	1/1:1,6:8:21.07:1077,21,0	0/0:25,0:25:75.25:0,75,2090	0/0:19,0:19:48.16:0,48,1434	0/0:30,0:30:90.31:0,90,2921	0/0:15,0:15:45.15:0,45,1499	0/0:17,0:17:47.76:0,48,1508	0/0:23,0:23:57.17:0,57,1492	1/1:9,20:30:84.29:4195,84,0	1/1:12,18:33:87.30:4154,87,0	1/1:3,13:22:60.21:2639,60,0	1/1:7,14:24:57.20:2684,57,0	1/1:9,10:22:51.18:2481,51,0	1/1:4,7:14:30.10:1510,30,0	1/1:8,18:29:72.25:3382,72,0	0/1:22,1:23:93.37:93,0,1963	1/1:4,7:15:33.11:1527,33,0	0/0:16,0:16:47.73:0,48,1431	1/1:7,4:17:47.94:1598,48,0	1/1:16,15:33:84.29:3582,84,0	1/1:7,2:11:18.06:757,18,0	1/1:16,24:42:99:5409,111,0	1/1:7,10:21:42.09:1956,42,0	1/1:5,5:11:24.08:964,24,0	0/0:18,0:18:51.16:0,51,1567	1/1:10,12:23:66.23:3092,66,0	1/1:14,24:41:99:5562,111,0	1/1:4,5:9:27.09:1304,27,0
chr10	9212208	.	ATGTGTGTGTG	A	12650.06	PASS	AB=0.575;AC=30;AF=0.536;AN=56;BaseQRankSum=12.341;DP=769;FS=1.274;HRun=0;HaplotypeScore=255.2063;InbreedingCoeff=0.8330;MQ=59.86;MQ0=14;MQRankSum=-14.375;QD=32.77;ReadPosRankSum=2.255;VQSLOD=3.9092;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,99,4287	1/1:3,7:10:15.05:464,15,0	0/0:56,0:26:36.08:0,36,940	0/0:38,0:20:17.57:0,18,1343	0/0:37,0:39:87.28:0,87,3879	0/0:14,0:15:39.13:0,39,1905	0/0:16,0:16:48.12:0,48,1757	0/0:27,0:28:54.15:0,54,1511	0/0:10,0:39:72.21:0,72,1163	0/1:6,0:36:14.74:503,0,15	0/1:8,0:23:5.95:130,0,6	1/1:3,20:23:27.09:835,27,0	1/1:3,24:27:42.14:1242,42,0	1/1:5,18:23:33.11:1021,33,0	1/1:9,0:26:36.06:353,36,0	0/0:26,0:27:78.27:0,78,3692	1/1:5,10:15:21.07:615,21,0	0/0:26,0:26:57.20:0,57,2612	1/1:9,8:19:30.06:570,30,0	1/1:8,23:31:24.10:1009,24,0	0/0:10,0:26:0:0,0,0	1/1:9,32:42:45.56:1392,46,0	1/1:7,0:27:8.91:89,9,0	1/1:4,0:18:18.03:177,18,0	0/0:31,0:32:87.30:0,87,3895	1/1:5,23:28:69.23:1782,69,0	1/1:10,19:28:69.20:1819,69,0	1/1:0,7:7:21.07:649,21,0
chr10	9212560	.	GTAAGTCATACCC	G	7856.40	PASS	AB=0.973;AC=11;AF=0.196;AN=56;BaseQRankSum=13.586;DP=748;FS=2.078;HRun=0;HaplotypeScore=256.2377;InbreedingCoeff=0.9054;MQ=88.26;MQ0=0;MQRankSum=-12.702;QD=55.72;ReadPosRankSum=2.071;VQSLOD=4.6579;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,141,8443	0/0:10,0:10:30.10:0,30,1762	0/0:37,0:37:99:0,102,5249	0/0:24,0:24:51.65:0,52,2779	0/0:30,0:30:84.29:0,84,4823	0/0:23,0:23:69.20:0,69,3832	0/0:24,0:24:72.25:0,72,4136	0/0:25,0:25:69.23:0,69,3448	0/0:36,0:36:99:0,105,6178	1/1:4,21:25:60.21:2192,60,0	1/1:1,10:11:27.09:947,27,0	0/0:42,0:42:99:0,123,7264	0/0:40,0:40:99:0,114,6916	0/0:25,0:25:75.24:0,75,4358	1/1:2,30:32:72.25:2682,72,0	0/0:22,0:22:63.22:0,63,3502	0/0:16,0:16:39.13:0,39,2356	0/0:14,0:14:42.14:0,42,2426	0/0:31,0:31:87.29:0,87,4800	0/0:22,0:22:66.23:0,66,3955	0/0:36,0:36:99:0,108,6272	0/0:32,0:32:87.30:0,87,5071	1/1:1,13:13:33.11:1228,33,0	1/1:8,15:23:23.94:800,24,0	0/0:20,0:20:60.21:0,60,3680	0/1:35,1:36:6.50:6,0,5799	0/0:39,0:38:99:0,117,6816	0/0:11,0:11:30.10:0,30,1744
chr10	9214388	.	C	CCT	92.90	PASS	AB=0.615;AC=1;AF=0.018;AN=56;BaseQRankSum=2.498;DP=557;FS=4.324;HRun=0;HaplotypeScore=129.5132;InbreedingCoeff=-0.0267;MQ=59.68;MQ0=10;MQRankSum=-1.763;QD=5.81;ReadPosRankSum=-1.542;VQSLOD=3.0366;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:47.93:0,48,602	0/0:7,0:7:5.96:0,6,74	0/0:37,0:19:26.88:0,27,300	0/0:41,0:14:7.44:0,7,148	0/0:14,0:14:27.08:0,27,334	0/0:20,0:20:42.11:0,42,508	0/0:26,0:27:51.46:0,51,602	0/0:17,0:17:27.05:0,27,334	0/0:16,0:16:20.91:0,21,232	0/0:30,0:30:67.97:0,68,908	0/0:9,0:9:8.91:0,9,101	0/0:22,0:20:35.71:0,36,386	0/0:15,0:16:27.56:0,28,347	0/0:17,0:17:26.96:0,27,303	0/0:21,0:21:27.07:0,27,323	0/0:12,0:12:15.03:0,15,184	0/0:18,0:18:33.03:0,33,393	0/0:20,0:20:41.57:0,42,490	0/0:20,0:19:30.09:0,30,362	0/0:16,0:16:20.94:0,21,243	0/1:6,10:15:23.23:167,0,23	0/0:11,0:11:27.04:0,27,331	0/0:16,0:16:36.03:0,36,444	0/0:37,0:37:68.75:0,69,842	0/0:12,0:12:21.03:0,21,244	0/0:29,1:30:23.07:0,23,805	0/0:25,0:24:54.12:0,54,664	0/0:6,0:6:6.02:0,6,74
chr10	9214411	.	CT	C	272.99	PASS	AB=0.800;AC=9;AF=0.161;AN=56;BaseQRankSum=8.092;DP=539;FS=4.157;HRun=1;HaplotypeScore=127.0231;InbreedingCoeff=0.0967;MQ=50.79;MQ0=17;MQRankSum=-1.929;QD=1.90;ReadPosRankSum=1.863;VQSLOD=-0.5928;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:25:25.44:0,25,203	0/0:4,1:5:10.55:0,11,71	0/0:26,0:9:24.06:0,24,279	0/0:36,0:13:22.43:0,22,216	0/0:14,0:13:26.94:0,27,300	0/0:21,0:21:39.01:0,39,547	0/0:32,0:31:38.62:0,39,535	0/0:22,0:20:52.61:0,53,499	0/0:18,0:18:21.03:0,21,272	0/0:32,0:31:84.35:0,84,1016	0/0:10,0:10:2.63:0,3,29	0/1:13,8:20:56.64:57,0,81	0/1:11,2:13:46.10:46,0,51	0/1:7,5:11:1.12:20,0,1	0/0:24,0:23:14.89:0,15,212	0/0:17,0:17:32.68:0,33,354	0/1:12,2:14:38.19:38,0,65	0/0:16,0:16:25.74:0,26,286	0/1:11,1:11:28.34:28,0,91	0/0:7,4:10:14.07:0,14,84	0/0:14,0:13:8.65:0,9,84	1/1:10,3:14:10.05:102,10,0	0/0:20,0:20:36.12:0,36,491	0/0:35,0:35:48.13:0,48,640	0/0:11,0:11:23.46:0,23,209	0/1:21,10:30:99:101,0,112	0/1:18,8:25:22.76:23,0,139	0/0:5,0:3:3.35:0,3,16
chr10	9214438	.	T	TCACA	2671.76	PASS	AB=0.966;AC=35;AF=0.673;AN=52;BaseQRankSum=4.051;DP=483;FS=4.979;HRun=0;HaplotypeScore=151.0336;InbreedingCoeff=0.2625;MQ=47.31;MQ0=11;MQRankSum=-0.780;QD=7.42;ReadPosRankSum=3.065;VQSLOD=2.5164;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,1:25:4.45:0,4,13	1/1:3,0:3:2.62:47,3,0	./.	./.	1/1:11,0:10:9.97:180,10,0	0/1:15,5:21:35.92:36,0,209	0/1:28,0:27:82.88:83,0,210	0/1:27,0:25:4.50:5,0,139	0/0:22,0:22:6.27:0,6,153	0/1:26,0:25:6.05:6,0,235	0/0:16,0:15:26.10:0,26,320	1/1:19,0:17:19.58:258,20,0	1/1:14,0:13:0.05:156,0,0	1/1:20,0:18:14.45:198,14,0	0/1:27,0:27:13.60:14,0,102	1/1:14,4:18:13.57:444,14,0	1/1:16,0:13:1.24:56,1,0	1/1:4,12:17:3.26:142,3,0	1/1:6,0:6:5.68:72,6,0	1/1:11,0:10:5.99:86,6,0	0/1:14,0:12:2.62:3,0,148	1/1:15,0:15:14.55:186,15,0	0/0:19,0:19:12.94:0,13,295	0/0:36,0:36:30.80:0,31,351	1/1:15,1:16:3.51:291,4,0	0/1:28,0:26:2.35:283,0,2	1/1:17,0:16:20.65:217,21,0	1/1:5,0:4:6.01:71,6,0
chr10	9214440	.	T	TCACACA	5554.64	PASS	AB=0.788;AC=44;AF=0.846;AN=52;BaseQRankSum=-0.898;DP=515;FS=17.745;HRun=0;HaplotypeScore=163.6980;InbreedingCoeff=0.0836;MQ=46.78;MQ0=14;MQRankSum=-3.692;QD=11.45;ReadPosRankSum=2.800;VQSLOD=2.8638;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,9:28:2.84:14,3,0	1/1:3,0:3:5.97:92,6,0	./.	./.	1/1:11,0:10:12.04:270,12,0	1/1:22,0:21:12.02:156,12,0	1/1:31,0:30:18.77:281,19,0	1/1:28,0:26:36.61:268,37,0	0/1:9,0:21:18.09:18,0,56	0/1:4,1:28:83.56:103,0,84	0/0:16,0:15:14.42:0,14,193	1/1:20,0:18:29.84:431,30,0	1/1:14,0:13:15.19:289,15,0	1/1:20,0:18:20.19:358,20,0	0/1:5,0:26:80.29:80,0,103	1/1:17,0:17:24.47:531,24,0	1/1:11,8:18:8.92:121,9,0	1/1:18,0:18:12.01:180,12,0	1/1:7,0:7:11.94:154,12,0	1/1:13,0:12:5.43:129,5,0	0/1:14,0:12:6.29:6,0,155	1/1:16,0:16:23.30:329,23,0	0/1:19,0:19:37.86:38,0,108	0/1:34,0:34:74.31:74,0,126	1/1:17,0:17:23.86:456,24,0	1/1:30,0:28:37.64:672,38,0	1/1:19,0:18:27.78:363,28,0	1/1:6,0:6:9:142,9,0
chr10	9214949	.	ATCTCTGTTTCTGTCTTTG	A	4763.58	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=3.750;DP=673;FS=2.917;HRun=0;HaplotypeScore=357.7482;InbreedingCoeff=0.8434;MQ=69.52;MQ0=1;MQRankSum=-7.505;QD=32.41;ReadPosRankSum=-1.557;VQSLOD=2.4546;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,99,6151	0/0:16,0:16:35.99:0,36,894	0/0:31,0:27:49.07:0,49,2022	0/0:39,0:36:93.31:0,93,4003	0/0:24,0:24:66.23:0,66,3779	0/0:33,0:33:93.30:0,93,5589	0/0:19,0:19:45.11:0,45,2703	0/0:38,0:38:99:0,99,3640	0/0:28,0:28:81.17:0,81,4643	1/1:7,16:23:33.10:828,33,0	1/1:5,10:15:6.02:186,6,0	0/0:24,0:24:37.62:0,38,2067	0/0:22,0:22:59.15:0,59,1647	0/0:29,0:29:83.64:0,84,2758	1/1:30,0:30:84.29:2353,84,0	0/0:23,0:23:66.21:0,66,4013	0/0:25,0:25:35.56:0,36,1490	0/0:17,0:17:48.13:0,48,2671	0/1:27,0:26:17.82:18,0,1211	0/0:25,0:25:66.15:0,66,2118	1/1:4,6:10:6.02:174,6,0	0/0:21,0:21:47.35:0,47,1283	1/1:9,17:25:15.05:472,15,0	1/1:16,0:16:27.09:734,27,0	0/0:21,0:21:57.19:0,57,3614	0/0:26,0:26:10.17:0,10,1525	0/0:24,0:22:66.20:0,66,2188	0/0:5,0:5:15.05:0,15,513
chr10	9214959	.	CTGTCTTTG	C	1508.76	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=6.663;DP=651;FS=6.127;HRun=0;HaplotypeScore=235.0107;InbreedingCoeff=0.9174;MQ=62.57;MQ0=2;MQRankSum=-4.878;QD=14.10;ReadPosRankSum=-1.367;VQSLOD=1.7380;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,111,4309	0/0:12,0:12:36.12:0,36,1061	0/0:34,0:26:36.49:0,36,2044	0/0:44,0:37:96.27:0,96,3357	0/0:23,0:23:69.19:0,69,2566	0/0:32,0:32:93.32:0,93,3769	0/0:17,0:17:45.15:0,45,1913	0/0:33,0:33:96.30:0,96,3238	0/0:25,0:25:72.23:0,72,3039	1/1:16,3:19:23.30:363,23,0	1/1:10,2:12:2.29:69,2,0	0/0:23,0:23:66.16:0,66,2164	0/0:21,0:21:59.23:0,59,1732	0/0:30,0:30:90.15:0,90,2752	1/1:25,4:29:19.30:630,19,0	0/0:21,0:21:63.22:0,63,2464	0/0:24,0:24:60.55:0,61,1737	0/0:19,0:20:47.19:0,47,1809	0/0:25,0:24:66.13:0,66,1865	0/0:28,0:28:73.29:0,73,2287	1/1:6,2:8:6.02:120,6,0	0/0:21,0:21:54.27:0,54,1499	1/1:18,6:23:15.05:317,15,0	1/1:13,2:15:9.05:179,9,0	0/0:19,0:19:57.18:0,57,2219	0/0:23,0:23:63.13:0,63,1939	0/0:23,0:21:66.23:0,66,2323	0/0:6,0:6:18.06:0,18,549
chr10	9214983	.	GTTTCTC	G	4567.25	PASS	AB=0.970;AC=27;AF=0.482;AN=56;BaseQRankSum=11.269;DP=585;FS=0.381;HRun=0;HaplotypeScore=188.1547;InbreedingCoeff=0.5478;MQ=48.10;MQ0=14;MQRankSum=-5.473;QD=14.78;ReadPosRankSum=2.065;VQSLOD=4.2720;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:87.23:0,87,2783	0/1:8,1:9:2.12:107,0,2	0/0:29,0:12:29.28:0,29,793	0/0:43,0:23:55.64:0,56,1013	0/0:21,0:21:63.21:0,63,1999	0/0:30,0:30:87.27:0,87,2223	0/0:16,0:16:45.15:0,45,1381	0/0:32,0:32:84.29:0,84,2498	0/1:25,1:26:25.75:26,0,1082	0/1:22,0:22:75.21:124,0,75	0/1:14,0:14:22.79:139,0,23	1/1:9,8:18:38.80:406,39,0	1/1:11,8:19:32.05:435,32,0	1/1:15,6:21:48.55:410,49,0	0/1:20,0:20:99:280,0,203	0/0:21,0:20:57.19:0,57,1806	1/1:15,4:20:26.06:346,26,0	0/0:22,0:22:51.14:0,51,1423	1/1:19,2:20:40.51:510,41,0	1/1:15,7:24:41.55:432,42,0	0/1:12,1:13:4.04:106,0,4	1/1:9,3:15:9.16:95,9,0	0/1:30,0:29:5.64:337,0,6	0/0:13,1:13:12.73:0,13,80	0/0:15,0:15:42.14:0,42,1443	1/1:12,2:17:41.91:483,42,0	1/1:10,4:13:26.67:222,27,0	1/1:3,2:5:12.79:109,13,0
chr10	9214989	.	C	CTCTCTG	2709.18	PASS	AB=1.000;AC=14;AF=0.250;AN=56;BaseQRankSum=7.230;DP=588;FS=0.576;HRun=0;HaplotypeScore=204.5176;InbreedingCoeff=0.5983;MQ=45.40;MQ0=17;MQRankSum=-8.506;QD=17.71;ReadPosRankSum=-1.819;VQSLOD=3.0823;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:74.72:0,75,1424	0/0:9,0:9:2.94:0,3,19	0/0:28,0:11:3.01:0,3,64	0/0:42,0:17:18.01:0,18,258	0/0:22,0:22:54.16:0,54,1046	0/0:28,0:28:41.99:0,42,863	0/0:17,0:17:33.10:0,33,637	0/0:31,0:31:60.15:0,60,1044	1/1:21,6:27:36.12:941,36,0	1/1:21,0:21:34.92:733,35,0	1/1:13,0:13:9.03:217,9,0	0/0:19,0:18:7.25:0,7,72	0/0:22,0:21:12.28:0,12,186	0/0:23,0:23:7.21:0,7,49	1/1:19,0:19:20.83:371,21,0	0/0:23,0:22:51.12:0,51,904	0/0:20,0:20:2.71:0,3,53	0/0:23,0:23:32.77:0,33,673	0/0:18,0:17:4.63:0,5,58	0/0:22,0:22:2.33:0,2,21	1/1:14,1:14:6.49:145,6,0	0/0:19,0:19:4.67:0,5,43	1/1:29,0:29:24.08:464,24,0	0/0:14,0:13:2.72:0,3,15	0/0:15,0:15:36.09:0,36,680	0/1:13,0:13:7.43:7,0,26	0/1:16,0:13:0.54:1,0,46	0/0:6,0:6:3.87:0,4,31
chr10	9214993	.	CTG	C	389.16	PASS	AB=0.957;AC=6;AF=0.107;AN=56;BaseQRankSum=6.532;DP=583;FS=5.697;HRun=0;HaplotypeScore=176.7414;InbreedingCoeff=-0.0979;MQ=43.21;MQ0=22;MQRankSum=-3.404;QD=3.24;ReadPosRankSum=1.726;VQSLOD=2.4340;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:84.19:0,84,1562	0/0:11,0:10:14.92:0,15,243	0/0:27,0:9:27.08:0,27,476	0/0:39,0:13:33.10:0,33,574	0/0:19,0:19:57.17:0,57,1032	0/0:24,0:24:63.07:0,63,1087	0/0:17,0:17:39.10:0,39,730	0/0:32,0:32:84.12:0,84,1422	0/0:25,0:25:48.03:0,48,638	0/1:21,0:21:99:154,0,343	0/1:13,0:13:31.22:31,0,79	0/0:21,0:20:40.62:0,41,564	0/1:22,0:21:4.97:5,0,347	0/0:22,0:22:54.17:0,54,905	0/1:11,6:17:50.93:150,0,51	0/0:24,0:23:45.22:0,45,1039	0/0:18,0:18:35.55:0,36,411	0/0:21,0:21:41.82:0,42,742	0/0:19,0:18:47.42:0,47,596	0/0:22,0:22:42.11:0,42,637	0/1:19,0:18:10.31:12,0,10	0/0:18,0:18:19.42:0,19,319	0/1:28,0:28:83.46:155,0,83	0/0:14,2:14:2.52:0,3,30	0/0:16,0:16:45.14:0,45,834	0/0:14,0:14:26.21:0,26,250	0/0:18,0:15:19.38:0,19,472	0/0:5,0:5:9.44:0,9,147
chr10	9214997	.	C	CTCTGTT	3163.22	PASS	AB=0.821;AC=12;AF=0.214;AN=56;BaseQRankSum=4.838;DP=578;FS=4.259;HRun=0;HaplotypeScore=198.8132;InbreedingCoeff=0.8529;MQ=42.71;MQ0=30;MQRankSum=-7.680;QD=22.43;ReadPosRankSum=-1.028;VQSLOD=2.7964;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:74.29:0,74,1637	0/0:12,0:11:8.73:0,9,73	0/0:25,0:7:14.98:0,15,170	0/0:38,0:12:21.07:0,21,405	0/0:21,0:20:57.18:0,57,1227	0/0:24,0:24:53.77:0,54,1049	0/0:16,0:16:35.63:0,36,763	0/0:31,0:31:81.06:0,81,1473	0/1:26,0:26:1.90:658,0,2	1/1:18,6:23:50.99:1073,51,0	1/1:8,3:11:14.90:313,15,0	0/0:20,0:19:34.88:0,35,291	0/0:22,0:21:42.60:0,43,455	0/0:21,0:21:44.14:0,44,361	1/1:13,3:16:24.03:531,24,0	0/0:23,0:22:56.76:0,57,1112	0/0:18,0:18:21.66:0,22,219	0/0:20,0:20:39.06:0,39,792	0/0:18,0:17:26.98:0,27,257	0/0:19,0:19:24.99:0,25,204	1/1:17,0:16:9.15:118,9,0	0/0:18,0:18:12.02:0,12,157	1/1:22,6:29:30.02:642,30,0	0/1:8,8:16:0.21:0,0,3	0/0:17,0:16:42.12:0,42,838	0/0:16,0:16:29.71:0,30,203	0/0:17,0:14:28.71:0,29,244	0/0:5,0:5:14.92:0,15,134
chr10	9215001	.	GTCTC	G	1021.64	PASS	AB=0.780;AC=11;AF=0.196;AN=56;BaseQRankSum=8.103;DP=564;FS=2.512;HRun=0;HaplotypeScore=181.8565;InbreedingCoeff=-0.0884;MQ=42.04;MQ0=36;MQRankSum=-5.276;QD=5.74;ReadPosRankSum=-2.077;VQSLOD=2.5216;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:78.17:0,78,1779	0/0:7,2:8:0.64:0,1,15	0/0:25,0:6:3.01:0,3,79	0/0:33,0:7:18.01:0,18,380	0/0:23,0:21:54.19:0,54,1300	0/0:23,0:23:48.09:0,48,1083	0/0:16,0:16:33.11:0,33,737	0/0:31,0:31:81.19:0,81,1524	0/1:24,0:25:99:117,0,316	0/0:22,0:21:0.32:0,0,601	0/0:11,0:11:8.70:0,9,118	0/1:9,9:17:17.03:133,0,17	0/1:16,8:24:76.79:252,0,77	0/1:15,6:21:29.39:33,0,29	0/0:15,0:15:7.74:0,8,133	0/0:24,0:23:60.12:0,60,1229	0/1:14,4:18:63.36:67,0,63	0/0:20,0:20:36.58:0,37,804	0/1:12,3:14:50.87:155,0,51	0/1:9,8:17:8.20:8,0,12	0/0:18,0:17:5.35:0,5,43	0/0:15,3:16:5.04:0,5,44	0/0:29,0:29:10.26:0,10,149	0/0:19,0:17:3.48:0,3,79	0/0:16,0:15:39.10:0,39,847	1/1:7,8:15:21.78:288,22,0	0/1:14,5:16:20.40:85,0,20	0/1:3,2:5:10.62:29,0,11
chr10	9215005	.	C	CTG	1261.21	PASS	AB=0.886;AC=11;AF=0.196;AN=56;BaseQRankSum=3.004;DP=563;FS=1.142;HRun=0;HaplotypeScore=171.4899;InbreedingCoeff=-0.1117;MQ=41.91;MQ0=38;MQRankSum=-5.031;QD=7.01;ReadPosRankSum=0.358;VQSLOD=3.0178;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:80.86:0,81,1145	0/0:5,4:8:8.77:0,9,55	0/0:22,0:3:3.01:0,3,46	0/0:29,0:6:18.01:0,18,248	0/0:24,0:22:54.18:0,54,822	0/0:23,0:21:47.80:0,48,686	0/0:18,0:18:32.80:0,33,502	0/0:30,0:30:81.19:0,81,1140	0/1:26,0:26:75.15:189,0,75	0/1:22,0:21:15.97:16,0,225	0/0:13,0:12:11.97:0,12,111	0/1:15,3:17:92.69:93,0,130	0/1:22,3:24:99:138,0,128	0/0:19,2:21:2.37:0,2,194	0/0:16,0:16:21.49:0,21,122	0/0:25,0:24:63.14:0,63,840	0/1:11,6:19:61:201,0,61	0/0:21,0:21:36.12:0,36,535	0/1:11,3:13:53.85:212,0,54	0/0:13,2:15:1.25:0,1,88	0/1:18,0:17:7.12:7,0,20	0/0:10,7:17:10.33:0,10,88	0/0:27,0:27:18.43:0,18,102	0/0:20,0:18:2.50:0,3,44	0/0:15,0:14:39.09:0,39,534	1/1:9,5:14:7.01:442,7,0	0/1:16,3:16:39.83:40,0,95	0/1:4,1:5:38.55:67,0,39
chr10	9215025	.	T	TAC	322.91	PASS	AB=0.942;AC=11;AF=0.220;AN=50;BaseQRankSum=-1.798;DP=534;FS=10.552;HRun=0;HaplotypeScore=167.9703;InbreedingCoeff=-0.0134;MQ=40.81;MQ0=40;MQRankSum=-0.775;QD=1.64;ReadPosRankSum=-1.727;VQSLOD=1.8021;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:41,0:40:53.76:107,0,54	0/0:7,0:6:0:0,0,0	./.	./.	0/0:24,0:22:2.74:0,3,12	0/1:22,1:20:26.71:63,0,27	1/1:16,0:16:1.81:17,2,0	1/1:26,0:24:3.81:10,4,0	0/0:15,0:21:5.68:0,6,28	0/0:15,0:14:5.94:0,6,50	0/0:15,0:14:8.98:0,9,95	0/0:27,0:25:11.59:0,12,147	0/0:23,0:22:19.97:0,20,178	0/0:16,0:17:11.33:0,11,90	0/1:11,0:13:13.40:13,0,50	0/1:17,4:21:57.52:114,0,58	0/0:20,0:19:20.70:0,21,176	0/1:20,0:20:19.57:82,0,20	./.	0/0:14,0:14:5.78:0,6,33	0/0:21,0:19:6.66:0,7,30	0/1:22,0:20:9.39:9,0,105	0/0:25,0:25:18.43:0,18,166	0/0:24,0:22:8.73:0,9,80	0/1:11,2:13:26.22:38,0,26	0/0:19,0:19:5.67:0,6,57	0/0:16,0:13:9.96:0,10,111	0/0:6,0:6:11.65:0,12,76
chr10	9215442	.	GTAA	G	4211.86	PASS	AB=0.917;AC=18;AF=0.333;AN=54;BaseQRankSum=-9.342;DP=387;FS=1.058;HRun=0;HaplotypeScore=74.2837;InbreedingCoeff=0.7358;MQ=68.18;MQ0=0;MQRankSum=4.904;QD=22.77;ReadPosRankSum=1.745;VQSLOD=4.4310;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,19:24:45.15:632,45,0	0/1:1,1:5:27.13:27,0,124	0/0:9,0:9:5.93:0,6,77	0/1:9,0:9:26.99:27,0,68	1/1:3,15:18:42.14:590,42,0	1/1:6,16:22:33.11:464,33,0	1/1:8,7:15:18.06:253,18,0	1/1:12,20:32:60.15:786,60,0	0/0:2,0:7:12.04:0,12,158	0/0:3,0:16:39.02:0,39,492	0/0:9,0:21:47.98:0,48,600	0/0:4,0:10:21.02:0,21,250	0/0:8,0:9:15.01:0,15,172	0/0:9,0:12:11.98:0,12,124	0/0:5,0:11:15.05:0,15,218	1/1:3,16:19:36.12:506,36,0	0/0:6,0:15:21.06:0,21,260	1/1:6,12:18:36.12:506,36,0	0/0:16,0:23:36.08:0,36,504	0/0:5,0:7:6.02:0,6,79	0/0:3,0:6:6.02:0,6,79	./.	0/0:5,0:5:3.01:0,3,50	0/0:3,0:7:12.04:0,12,158	1/1:7,16:23:30.10:422,30,0	0/0:10,0:17:33.06:0,33,412	0/0:12,0:20:21.07:0,21,275	0/0:4,0:4:12.02:0,12,156
chr10	9216432	.	TGCACAC	T	1725.42	PASS	AB=1.000;AC=20;AF=0.357;AN=56;BaseQRankSum=-2.391;DP=539;FS=14.907;HRun=0;HaplotypeScore=130.2402;InbreedingCoeff=-0.1012;MQ=62.38;MQ0=12;MQRankSum=-1.080;QD=6.34;ReadPosRankSum=1.213;VQSLOD=1.8601;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:89.51:0,90,1242	0/1:8,0:8:28.88:29,0,210	0/0:32,0:17:7.33:0,7,183	0/0:31,0:18:36.96:0,37,303	0/0:18,0:18:41.91:0,42,811	0/0:18,0:18:39.76:0,40,624	0/0:41,0:41:95.27:0,95,1677	0/0:20,0:19:40.88:0,41,367	0/0:19,0:19:40.56:0,41,533	1/1:7,10:17:29.19:270,29,0	1/1:14,1:15:6.55:144,7,0	0/1:17,0:17:54.75:55,0,562	0/1:18,0:18:99:114,0,362	0/1:14,0:14:72.88:73,0,193	1/1:19,1:20:16.67:127,17,0	0/0:21,0:21:54.05:0,54,1141	0/1:27,0:27:99:196,0,366	0/0:10,0:10:20.92:0,21,330	0/1:10,0:10:85.72:86,0,118	0/1:11,0:11:99:142,0,142	0/1:25,0:24:38.42:202,0,38	0/1:14,0:14:99:117,0,266	0/1:18,0:18:73.47:73,0,360	0/1:27,0:27:99:133,0,369	0/0:13,0:13:26.95:0,27,555	0/1:9,0:9:61.76:62,0,160	0/1:16,0:16:3.11:3,0,102	0/1:6,0:6:74.83:75,0,91
chr10	9216435	.	ACACG	A	2591.62	PASS	AB=0.993;AC=23;AF=0.411;AN=56;BaseQRankSum=-0.971;DP=553;FS=35.449;HRun=0;HaplotypeScore=113.7484;InbreedingCoeff=0.0191;MQ=61.09;MQ0=12;MQRankSum=-1.107;QD=8.79;ReadPosRankSum=2.554;VQSLOD=1.3628;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:89.37:0,89,929	0/1:11,0:11:28.69:29,0,116	0/0:32,0:17:7.33:0,7,182	0/0:30,0:17:36.97:0,37,304	0/0:19,0:19:44.92:0,45,676	0/0:19,0:19:39.76:0,40,498	0/0:40,0:40:64.44:0,64,1244	0/0:19,0:18:46.81:0,47,420	0/0:19,0:19:41.66:0,42,439	1/1:13,1:14:32.85:326,33,0	1/1:4,11:15:12.04:164,12,0	0/1:17,0:17:61.88:62,0,289	0/1:18,1:19:99:167,0,187	0/1:14,0:14:94.92:95,0,126	1/1:2,17:19:18.06:318,18,0	0/0:21,0:21:54.05:0,54,866	0/1:26,1:26:99:290,0,159	0/1:11,0:11:10.25:10,0,279	0/1:12,0:12:58.57:88,0,59	0/1:13,0:13:99:139,0,100	1/1:25,0:24:39.65:315,40,0	0/1:16,0:16:99:114,0,142	0/1:20,0:20:99:170,0,197	0/1:28,0:27:99:196,0,114	0/0:16,0:16:32.97:0,33,543	0/1:11,0:11:95.75:100,0,96	1/1:14,2:16:8.28:118,8,0	0/1:7,0:7:26.37:75,0,26
chr10	9216437	.	ACG	A	4136.05	PASS	AB=0.946;AC=24;AF=0.429;AN=56;BaseQRankSum=-1.059;DP=559;FS=3.220;HRun=0;HaplotypeScore=93.0909;InbreedingCoeff=0.2126;MQ=60.79;MQ0=12;MQRankSum=-2.160;QD=13.83;ReadPosRankSum=-0.971;VQSLOD=3.4389;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:79.59:0,80,698	0/1:12,0:12:22.72:144,0,23	0/0:30,0:15:7.33:0,7,183	0/0:30,0:17:36.92:0,37,303	0/0:19,0:19:43.06:0,43,419	0/0:21,0:21:39.76:0,40,392	0/0:41,0:41:83.77:0,84,953	0/0:17,0:16:27.47:0,27,322	0/0:19,0:19:37.71:0,38,345	1/1:14,0:14:35.60:279,36,0	1/1:14,0:14:11.91:92,12,0	0/1:15,2:17:94.72:196,0,95	0/1:16,2:18:49.11:303,0,49	0/1:12,0:12:15.50:167,0,16	1/1:18,0:18:17.94:141,18,0	0/0:22,0:22:53.92:0,54,543	0/1:27,1:27:31.73:370,0,32	0/1:11,0:11:33.42:33,0,170	1/1:10,1:11:17.08:237,17,0	0/1:12,1:13:6.14:209,0,6	1/1:26,2:27:50.73:454,51,0	0/1:18,0:18:37.83:164,0,38	0/1:19,2:21:43.95:298,0,44	0/1:23,6:28:0.43:476,0,0	0/0:17,0:17:35.50:0,35,378	0/1:11,1:12:6.03:214,0,6	1/1:2,14:16:20.93:276,21,0	0/1:7,0:7:1.23:80,0,1
chr10	9216439	.	G	GCA	1360.74	PASS	AB=0.906;AC=20;AF=0.385;AN=52;BaseQRankSum=-5.807;DP=577;FS=0.000;HRun=0;HaplotypeScore=115.9123;InbreedingCoeff=-0.5048;MQ=59.62;MQ0=12;MQRankSum=0.620;QD=3.34;ReadPosRankSum=-4.140;VQSLOD=1.0077;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:27,18:46:25.08:240,0,25	0/1:12,0:12:16.09:16,0,29	./.	./.	0/1:13,7:20:69.19:158,0,69	0/1:14,7:22:42.04:120,0,42	0/1:28,11:41:99:264,0,128	0/1:17,0:16:14.72:15,0,23	0/1:17,4:21:51.52:52,0,54	0/1:17,0:17:19.76:20,0,20	0/0:13,0:13:6.06:0,6,28	0/1:19,0:19:64.85:65,0,104	0/0:18,0:18:21.14:0,21,135	0/1:13,0:13:35.35:35,0,37	0/0:18,0:18:16.60:0,17,73	0/1:11,10:22:6.05:313,0,6	0/1:28,0:27:4.63:5,0,89	0/1:13,0:13:25.86:35,0,26	0/1:11,0:11:2.54:31,0,3	0/0:14,0:14:6.02:0,6,32	0/1:28,0:27:10.88:38,0,11	0/1:20,0:20:12.11:12,0,51	0/1:21,0:21:6.63:7,0,78	0/0:31,0:30:4.23:0,4,90	0/1:10,8:18:65.63:66,0,169	0/1:11,0:11:11.17:11,0,40	0/0:16,0:16:18.80:0,19,78	0/1:7,0:7:0:0,0,0
chr10	9219214	.	T	TAC	809.41	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-0.292;DP=691;FS=0.822;HRun=0;HaplotypeScore=141.7411;InbreedingCoeff=0.8923;MQ=61.97;MQ0=3;MQRankSum=-0.898;QD=36.79;ReadPosRankSum=-0.378;VQSLOD=5.1962;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:54.15:0,54,679	0/0:12,0:12:26.77:0,27,346	0/0:50,0:34:47.57:0,48,832	0/0:31,0:21:25.81:0,26,400	0/0:30,0:30:75.04:0,75,965	0/0:23,0:23:63.19:0,63,797	0/0:24,0:24:63.20:0,63,810	0/0:42,0:42:78.30:0,78,1175	0/0:29,0:29:57.11:0,57,733	0/0:34,0:34:90.29:0,90,1158	0/0:20,0:20:45.15:0,45,578	0/0:26,0:26:63.19:0,63,796	0/0:22,0:22:41.97:0,42,485	0/0:17,0:17:42.02:0,42,525	0/0:22,0:22:48.16:0,48,617	0/0:20,0:20:48.16:0,48,618	0/0:15,0:15:24.08:0,24,309	0/0:22,0:22:51.17:0,51,656	0/0:22,0:22:54.18:0,54,695	0/0:30,0:30:78.25:0,78,1003	1/1:0,21:22:54.18:904,54,0	0/0:18,0:18:48.16:0,48,626	0/0:29,0:29:69.21:0,69,886	0/0:18,0:18:36.12:0,36,463	0/0:31,0:31:84.27:0,84,1080	0/0:18,0:18:5.46:0,5,430	0/0:23,0:23:60.19:0,60,772	0/0:15,0:15:36.12:0,36,458
chr10	9219238	.	TTC	T	4720.59	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=3.026;DP=628;FS=5.557;HRun=0;HaplotypeScore=151.0804;InbreedingCoeff=0.9918;MQ=64.07;MQ0=3;MQRankSum=-3.616;QD=24.72;ReadPosRankSum=0.934;VQSLOD=5.5023;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:24.04:0,24,248	1/1:2,12:14:33.11:418,33,0	0/0:29,0:24:33.79:0,34,549	0/0:35,0:24:24.47:0,24,464	0/0:31,0:30:54.03:0,54,526	0/0:23,0:23:60:0,60,601	0/0:27,0:27:55.03:0,55,547	0/0:38,0:38:73.77:0,74,729	0/0:33,0:33:51.05:0,51,816	0/0:30,0:28:66.07:0,66,978	0/0:18,0:18:24.07:0,24,350	1/1:5,17:22:39.12:496,39,0	1/1:4,16:20:41.72:506,42,0	1/1:8,8:16:27.07:337,27,0	0/0:20,0:20:39.11:0,39,587	0/0:16,0:16:39.07:0,39,404	1/1:1,9:10:15.05:191,15,0	0/0:19,0:19:32.60:0,33,361	1/1:9,6:15:24.06:280,24,0	1/1:8,13:21:30.10:382,30,0	0/0:25,0:25:45.10:0,45,631	1/1:6,11:17:36.11:448,36,0	0/0:27,0:27:45.56:0,46,637	0/0:17,0:17:24.55:0,25,366	0/0:24,0:24:38.63:0,39,409	1/1:3,21:24:12.55:652,13,0	1/1:5,16:21:54.16:668,54,0	1/1:2,9:11:27.09:344,27,0
chr10	9219248	.	CTCTG	C	1288.35	PASS	AB=0.982;AC=18;AF=0.321;AN=56;BaseQRankSum=8.510;DP=600;FS=6.964;HRun=0;HaplotypeScore=186.7708;InbreedingCoeff=0.6603;MQ=58.39;MQ0=3;MQRankSum=-2.991;QD=6.82;ReadPosRankSum=4.759;VQSLOD=1.9405;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:26.98:0,27,332	1/1:14,0:14:24.75:102,25,0	0/0:19,0:14:37.62:0,38,885	0/0:27,0:17:33.81:0,34,792	0/0:28,0:27:53.91:0,54,643	0/0:24,0:24:65.25:0,65,730	0/0:25,0:25:65.48:0,65,750	0/0:42,0:42:99:0,115,964	0/0:36,0:36:50.92:0,51,1306	0/0:31,0:29:81.84:0,82,1578	0/0:15,0:15:24.08:0,24,542	1/1:20,0:19:31.73:126,32,0	1/1:19,1:20:15.20:102,15,0	1/1:13,0:13:19.77:89,20,0	0/0:20,0:20:39.11:0,39,855	0/0:19,0:19:44.99:0,45,492	1/1:9,0:9:12.72:53,13,0	0/0:16,0:16:15.53:0,16,413	0/1:12,1:13:41.78:118,0,42	0/1:19,0:19:1.32:93,0,1	0/0:23,0:23:45.12:0,45,960	1/1:17,1:18:0.87:194,1,0	0/0:25,0:24:57.09:0,57,1060	0/0:16,0:16:30.04:0,30,577	0/0:20,0:20:53.78:0,54,601	0/1:30,0:30:99:272,0,104	1/1:19,1:20:45.14:253,45,0	0/1:13,0:13:18.49:81,0,18
chr10	9219252	.	GTGTCTC	G	4624.77	PASS	AB=1.000;AC=18;AF=0.321;AN=56;BaseQRankSum=-6.911;DP=586;FS=1.239;HRun=0;HaplotypeScore=190.3537;InbreedingCoeff=0.8036;MQ=57.88;MQ0=3;MQRankSum=1.824;QD=20.02;ReadPosRankSum=-5.652;VQSLOD=2.9037;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:23:20.91:234,21,0	0/0:13,0:13:22.07:0,22,147	0/0:17,0:12:27.98:0,28,555	0/0:27,0:17:27.67:0,28,420	1/1:26,0:25:44.34:520,44,0	1/1:23,0:23:57.25:559,57,0	1/1:24,0:24:59.74:687,60,0	1/1:1,40:41:99:1302,118,0	0/0:37,0:37:13.30:0,13,754	0/0:31,0:29:25.03:0,25,490	0/0:17,0:17:12.74:0,13,86	0/0:20,0:19:33.39:0,33,228	0/0:20,0:20:4.52:0,5,146	0/0:13,0:13:10.70:0,11,78	0/0:19,0:19:27.03:0,27,244	1/1:19,0:18:43.88:460,44,0	0/0:9,0:9:11.53:0,12,85	1/1:16,0:16:32.61:293,33,0	0/0:13,0:12:14.04:0,14,120	0/0:19,0:19:25.98:0,26,208	0/0:21,0:21:26.11:0,26,264	0/0:18,0:18:16.28:0,16,151	0/1:24,0:23:5.93:6,0,179	0/1:16,0:16:23.15:23,0,81	1/1:19,0:19:49.40:541,49,0	0/0:29,0:29:55.40:0,55,478	0/0:19,0:19:32.37:0,32,268	0/0:13,0:13:13.34:0,13,189
chr10	9219276	.	GTCTC	G	477.29	PASS	AB=0.879;AC=16;AF=0.308;AN=52;BaseQRankSum=0.935;DP=621;FS=0.829;HRun=0;HaplotypeScore=177.3039;InbreedingCoeff=0.0758;MQ=43.30;MQ0=24;MQRankSum=-1.983;QD=1.46;ReadPosRankSum=5.344;VQSLOD=2.5463;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:27:7.16:7,0,59	0/0:11,0:11:5.45:0,5,40	./.	./.	0/0:25,0:24:5.93:0,6,43	0/0:18,0:18:14.08:0,14,93	0/1:27,0:26:10.88:11,0,52	0/1:39,0:40:9.66:10,0,204	0/1:10,1:35:30.68:31,0,82	0/1:26,10:35:99:208,0,121	0/0:13,8:20:0:0,0,0	1/1:23,0:22:4.39:11,4,0	0/0:22,0:24:14.84:0,15,138	1/1:14,0:14:0.63:4,1,0	1/1:13,8:21:6.02:85,6,0	0/0:23,0:21:11.66:0,12,147	0/0:12,0:11:2.51:0,3,68	0/0:17,0:17:5.93:0,6,58	0/0:17,0:14:15.18:0,15,126	0/1:26,0:24:1.48:1,0,17	0/1:17,1:21:22.94:36,0,23	0/0:30,0:28:2.98:0,3,24	0/0:11,10:20:5.73:0,6,36	1/1:8,9:16:11.66:196,12,0	0/0:16,0:16:10.96:0,11,68	0/1:33,1:32:18.79:19,0,183	0/0:13,0:13:5.64:0,6,40	0/0:14,0:13:7.80:0,8,52
chr10	9219291	.	T	TCCCTCT	5933.55	PASS	AB=0.891;AC=35;AF=0.673;AN=52;BaseQRankSum=-0.568;DP=634;FS=44.265;HRun=0;HaplotypeScore=188.4895;InbreedingCoeff=0.6544;MQ=39.84;MQ0=32;MQRankSum=-1.747;QD=13.33;ReadPosRankSum=-0.798;VQSLOD=2.7723;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:17,15:31:46.45:87,0,46	1/1:10,0:10:21.89:278,22,0	./.	./.	1/1:26,0:25:14.96:122,15,0	1/1:18,0:18:19.39:235,19,0	1/1:29,0:27:28.44:470,28,0	1/1:56,0:53:26.86:586,27,0	0/0:39,0:38:23.04:0,23,189	0/0:28,0:27:9.71:0,10,178	0/0:21,0:20:3:0,3,25	1/1:28,0:27:33.75:393,34,0	0/1:25,0:25:13.76:564,0,14	1/1:21,0:21:21.32:287,21,0	0/0:18,0:18:14.28:0,14,116	1/1:24,0:22:39.63:494,40,0	0/1:11,0:10:9.44:201,0,9	1/1:15,0:15:14.24:112,14,0	1/1:21,0:18:30.35:388,30,0	1/1:26,0:23:22.69:238,23,0	0/0:24,0:23:15.24:0,15,101	1/1:29,0:27:6.09:72,6,0	0/0:23,0:20:8.27:0,8,60	0/0:18,0:16:14.42:0,14,160	1/1:13,0:13:14.98:139,15,0	1/1:39,0:37:21.43:838,21,0	1/1:10,0:10:21.44:276,21,0	1/1:11,0:8:14.49:153,14,0
chr10	9219301	.	CCT	C	571.26	PASS	AB=0.962;AC=17;AF=0.315;AN=54;BaseQRankSum=-0.550;DP=617;FS=0.723;HRun=0;HaplotypeScore=145.1139;InbreedingCoeff=0.0510;MQ=39.56;MQ0=34;MQRankSum=-0.497;QD=1.71;ReadPosRankSum=-0.967;VQSLOD=2.3624;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:23,1:22:18.50:19,0,75	1/1:9,0:9:8.50:44,9,0	./.	0/0:30,0:2:0.89:0,1,2	0/0:22,0:21:2.20:0,2,7	0/0:12,0:12:6.69:0,7,92	0/1:28,0:26:9.22:9,0,111	0/1:44,5:44:88.52:166,0,89	0/0:39,0:38:39.96:0,40,509	0/0:29,0:28:26.97:0,27,233	0/0:23,0:22:4.35:0,4,43	1/1:26,0:25:11.33:74,11,0	0/1:26,0:26:40.97:79,0,41	1/1:25,1:26:7.50:50,8,0	0/0:17,0:17:1.02:0,1,25	0/1:24,1:23:4.35:4,0,107	0/1:10,1:9:21.70:29,0,22	0/0:14,0:14:14.79:0,15,113	0/1:25,0:22:11.73:12,0,37	1/1:17,4:18:6.92:35,7,0	0/0:15,1:15:0:0,0,0	0/1:27,3:28:17.74:93,0,18	0/0:23,0:20:6.70:0,7,46	0/0:18,0:16:10.06:0,10,58	0/0:11,0:11:11.69:0,12,101	0/1:34,0:32:42.05:109,0,42	0/0:8,0:8:0.25:0,0,15	0/0:8,0:4:2.84:0,3,14
chr10	9219313	.	TCTCC	T	2838.43	PASS	AB=0.997;AC=37;AF=0.661;AN=56;BaseQRankSum=-4.716;DP=617;FS=7.589;HRun=0;HaplotypeScore=128.7380;InbreedingCoeff=-0.2303;MQ=49.57;MQ0=28;MQRankSum=1.204;QD=5.37;ReadPosRankSum=-2.500;VQSLOD=1.3782;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:20:2.77:111,3,0	1/1:9,1:10:10.32:145,10,0	0/1:32,0:9:6.34:6,0,60	0/0:50,0:11:1.07:0,1,44	0/1:19,0:19:5.29:13,0,5	0/1:14,0:14:48.03:141,0,48	0/1:31,0:29:13.22:177,0,13	0/1:46,0:41:4.17:374,0,4	0/0:37,0:36:45.94:0,46,858	0/1:30,0:29:99:278,0,215	1/1:17,0:16:14.92:125,15,0	1/1:18,1:18:8.84:82,9,0	1/1:21,0:21:7.90:74,8,0	1/1:24,1:25:6.88:75,7,0	1/1:21,0:21:14.77:166,15,0	0/1:29,0:28:30.56:161,0,31	0/1:12,0:10:24.13:24,0,32	0/1:13,0:13:57.04:65,0,57	0/1:21,1:20:77.65:263,0,78	1/1:20,0:18:8.89:77,9,0	1/1:13,0:12:3:25,3,0	0/1:25,0:24:15.27:157,0,15	0/1:19,0:16:10.55:40,0,11	0/1:17,0:15:31.30:31,0,47	0/1:11,0:11:11.86:12,0,32	1/1:29,0:27:16.92:280,17,0	0/1:7,0:7:0.01:51,0,0	1/1:6,0:3:7.17:42,7,0
chr10	9219315	.	TCC	T	4539.64	PASS	AB=0.994;AC=44;AF=0.786;AN=56;BaseQRankSum=-4.843;DP=612;FS=6.673;HRun=3;HaplotypeScore=108.8265;InbreedingCoeff=-0.0444;MQ=50.33;MQ0=26;MQRankSum=1.474;QD=7.87;ReadPosRankSum=0.434;VQSLOD=1.3112;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:22:17.93:236,18,0	1/1:8,1:9:14.91:133,15,0	0/1:37,0:11:6.44:6,0,87	0/1:53,0:13:6.45:6,0,55	1/1:20,0:20:14.27:88,14,0	0/1:14,0:14:8.26:165,0,8	1/1:29,0:27:1.15:198,1,0	1/1:45,0:40:71.62:672,72,0	0/0:35,0:34:45.98:0,46,710	0/1:30,0:29:99:292,0,120	1/1:17,0:16:16.01:131,16,0	1/1:18,2:19:20.27:235,20,0	1/1:14,4:18:14.44:181,14,0	1/1:7,19:26:11.93:131,12,0	1/1:20,0:20:14.80:167,15,0	1/1:28,0:27:4.18:201,4,0	0/1:12,0:10:19.30:81,0,19	0/1:12,0:12:3.69:68,0,4	0/1:20,1:19:21.02:257,0,21	1/1:16,1:16:13.42:154,13,0	1/1:11,0:10:3:25,3,0	1/1:17,8:24:11.84:280,12,0	0/1:18,0:16:8.65:62,0,9	0/1:16,0:14:31.70:32,0,47	0/1:12,0:12:21.27:32,0,21	1/1:26,3:27:36.05:556,36,0	1/1:8,0:8:14.88:109,15,0	1/1:6,0:3:7.17:42,7,0
chr10	9219317	.	C	CT	77.10	PASS	AB=0.975;AC=12;AF=0.214;AN=56;BaseQRankSum=-0.328;DP=612;FS=0.793;HRun=0;HaplotypeScore=118.1990;InbreedingCoeff=-0.1561;MQ=50.71;MQ0=24;MQRankSum=3.475;QD=0.40;ReadPosRankSum=-0.827;VQSLOD=2.1532;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:20,1:20:45.86:46,0,60	0/0:9,0:9:11.34:0,11,47	0/0:40,0:13:29.89:0,30,311	0/0:54,0:13:17.29:0,17,185	0/1:19,1:20:27.11:42,0,27	0/0:13,0:13:20.12:0,20,130	0/1:28,0:26:5.01:5,0,128	0/0:45,0:40:92.91:0,93,500	0/0:37,0:37:45.14:0,45,610	0/0:30,0:29:63.38:0,63,403	0/0:18,0:17:13.35:0,13,66	0/1:20,0:19:2.59:3,0,59	0/0:16,0:16:30.46:0,30,202	0/0:24,0:24:7.90:0,8,35	0/0:21,0:21:0.76:0,1,78	0/1:28,0:27:27.57:28,0,126	0/1:12,0:10:4.63:5,0,102	0/1:11,1:12:30.98:31,0,61	0/0:21,0:19:53.67:0,54,381	0/0:15,0:14:13.83:0,14,59	1/1:11,0:10:0.47:1,0,0	0/0:26,0:25:29.95:0,30,141	0/0:17,0:15:12.44:0,12,55	0/1:19,0:17:5.82:6,0,102	0/1:11,1:12:30.55:31,0,38	0/0:27,0:26:48.91:0,49,281	0/1:8,0:8:10.27:10,0,54	0/0:6,0:3:8.80:0,9,53
chr10	9219672	.	C	CCA	1868.74	PASS	AB=0.883;AC=45;AF=0.900;AN=50;BaseQRankSum=2.119;DP=519;FS=1.622;HRun=0;HaplotypeScore=133.7408;InbreedingCoeff=-0.0446;MQ=57.08;MQ0=19;MQRankSum=-2.188;QD=4.04;ReadPosRankSum=-1.381;VQSLOD=2.8738;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:23,2:27:25.95:38,0,26	1/1:5,0:5:5.99:49,6,0	./.	./.	0/1:13,0:15:34.24:71,0,34	1/1:16,1:17:3.01:44,3,0	0/1:18,7:27:13.50:205,0,14	1/1:25,0:25:0.89:2,1,0	1/1:19,0:17:10.77:69,11,0	1/1:10,0:11:14.95:135,15,0	1/1:14,0:16:2.58:10,3,0	1/1:19,0:19:5.67:36,6,0	1/1:24,0:24:22.60:157,23,0	1/1:26,0:26:8.31:62,8,0	1/1:15,0:14:5.61:52,6,0	1/1:8,0:8:3.01:44,3,0	1/1:15,0:15:8.27:46,8,0	0/1:14,3:19:45.94:150,0,46	1/1:15,0:14:11.49:77,11,0	./.	1/1:22,0:22:9:87,9,0	1/1:14,0:13:5.58:34,6,0	1/1:7,0:6:2.99:24,3,0	1/1:24,3:45:33.04:360,33,0	0/1:19,0:19:0:0,0,0	1/1:19,0:17:21.62:146,22,0	1/1:19,0:14:5.97:45,6,0	1/1:7,0:7:5.74:38,6,0
chr10	9219717	.	C	CA	2768.06	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=13.827;DP=580;FS=14.296;HRun=2;HaplotypeScore=120.4462;InbreedingCoeff=0.9352;MQ=54.35;MQ0=15;MQRankSum=-1.835;QD=13.50;ReadPosRankSum=-1.594;VQSLOD=1.4932;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:49.54:0,50,593	1/1:11,0:11:21.40:173,21,0	0/0:24,0:15:39.04:0,39,458	0/0:23,0:14:36.11:0,36,442	0/0:23,0:23:32.36:0,32,525	0/0:20,0:20:40.42:0,40,482	0/0:32,0:32:49.46:0,49,534	0/0:31,0:30:73.43:0,73,867	1/1:18,1:18:44.02:308,44,0	0/0:23,0:21:4.93:0,5,478	0/0:21,0:20:8.84:0,9,412	1/1:15,0:13:27.09:198,27,0	1/1:25,1:26:52.97:369,53,0	1/1:24,1:25:33.62:224,34,0	0/0:18,0:17:2.58:0,3,241	0/0:13,0:13:37.67:0,38,441	1/1:11,0:12:23.79:174,24,0	0/0:25,0:25:49.53:0,50,540	1/1:12,1:12:26.81:211,27,0	1/1:10,0:9:14.89:108,15,0	0/0:26,0:24:20.08:0,20,394	1/1:16,0:16:38.61:261,39,0	0/0:10,0:10:24.05:0,24,279	0/0:43,0:42:51.13:0,51,463	0/0:15,0:15:27.08:0,27,332	1/1:30,0:30:82.65:650,83,0	1/1:18,1:17:34.47:253,34,0	1/1:6,0:6:8.85:62,9,0
chr10	9219718	.	A	AC	2270.96	PASS	AB=0.885;AC=27;AF=0.482;AN=56;BaseQRankSum=12.477;DP=549;FS=20.589;HRun=1;HaplotypeScore=106.7513;InbreedingCoeff=0.7667;MQ=55.45;MQ0=15;MQRankSum=-0.450;QD=9.05;ReadPosRankSum=0.828;VQSLOD=-0.0377;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:54.57:0,55,686	1/1:11,0:11:20.19:111,20,0	0/0:24,0:15:44.63:0,45,558	0/0:23,0:14:39.13:0,39,511	0/0:22,0:22:11.07:0,11,568	0/0:18,2:20:45.06:0,45,563	0/0:30,0:31:50.46:0,50,613	0/0:31,0:30:76.85:0,77,984	1/1:16,2:16:29.90:221,30,0	0/0:20,0:18:8.44:0,8,528	0/1:19,1:19:0.90:1,0,479	1/1:14,1:12:22.84:128,23,0	1/1:22,1:23:39.02:361,39,0	1/1:23,0:23:3.82:138,4,0	0/1:13,4:16:13.10:13,0,314	0/0:13,0:13:36.59:0,37,476	1/1:9,3:12:24.32:195,24,0	0/0:23,0:23:51.35:0,51,629	1/1:10,2:11:26.93:218,27,0	1/1:8,2:9:14.64:111,15,0	0/1:22,3:22:21.04:21,0,403	1/1:15,1:16:29.38:232,29,0	0/0:11,0:10:24.03:0,24,299	0/0:41,0:40:40.53:0,41,465	0/0:12,0:12:33.04:0,33,403	1/1:27,1:28:76.49:495,76,0	1/1:17,0:15:31.93:200,32,0	1/1:4,0:4:5.96:43,6,0
chr10	9219719	.	AT	A	5113.25	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=11.337;DP=538;FS=9.895;HRun=1;HaplotypeScore=92.5379;InbreedingCoeff=0.9782;MQ=56.90;MQ0=15;MQRankSum=-1.703;QD=28.41;ReadPosRankSum=-0.197;VQSLOD=3.4916;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:60.02:0,60,909	1/1:0,10:10:24.03:311,24,0	0/0:24,0:15:44.98:0,45,677	0/0:24,0:15:42.14:0,42,654	0/0:22,0:22:36.20:0,36,766	0/0:19,0:19:47.91:0,48,739	0/0:33,0:33:71.70:0,72,1037	0/0:30,0:29:79.48:0,79,1207	1/1:4,14:16:40.28:452,40,0	0/0:20,0:18:35.72:0,36,762	0/0:20,0:19:16.86:0,17,628	1/1:4,11:12:27.03:352,27,0	1/1:2,19:21:54.13:704,54,0	1/1:1,22:23:39.08:429,39,0	0/0:17,0:16:16.59:0,17,490	0/0:13,0:13:39.13:0,39,589	1/1:4,8:12:23.84:287,24,0	0/0:22,0:22:62.84:0,63,860	1/1:4,6:9:23.99:290,24,0	1/1:2,7:8:15.04:206,15,0	0/0:23,0:20:20.88:0,21,554	1/1:1,14:15:44.68:507,45,0	0/0:11,0:10:27.08:0,27,408	0/0:41,0:40:66.22:0,66,1005	0/0:12,0:12:33.11:0,33,509	1/1:2,24:26:78.22:1026,78,0	1/1:2,15:15:39.01:467,39,0	1/1:0,4:4:6.02:84,6,0
chr10	9223901	.	AACACAC	A	4069.42	PASS	AB=0.667;AC=21;AF=0.389;AN=54;BaseQRankSum=-1.803;DP=639;FS=3.208;HRun=0;HaplotypeScore=158.5085;InbreedingCoeff=0.8402;MQ=63.29;MQ0=9;MQRankSum=-8.683;QD=18.17;ReadPosRankSum=0.192;VQSLOD=3.3314;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:31:24.06:0,24,308	1/1:3,5:8:12.03:242,12,0	./.	0/0:22,0:14:3.01:0,3,71	0/0:9,0:18:23.26:0,23,306	0/0:8,0:19:27.32:0,27,390	0/0:18,0:31:26.31:0,26,409	0/0:27,0:26:15.05:0,15,238	0/0:20,0:20:11.07:0,11,305	0/0:12,0:26:48.84:0,49,1373	0/0:7,0:17:11.74:0,12,316	1/1:9,6:16:21.03:364,21,0	1/1:7,13:21:33.96:637,34,0	1/1:15,9:24:32.99:482,33,0	0/0:11,0:26:32.58:0,33,901	0/0:13,0:27:37.62:0,38,550	1/1:17,10:27:15:266,15,0	0/0:14,0:16:17.90:0,18,179	1/1:15,1:16:5.70:111,6,0	1/1:9,6:16:8.99:143,9,0	0/0:22,0:20:12:0,12,305	1/1:11,16:27:21.95:287,22,0	0/0:10,0:21:16.30:0,16,474	0/0:20,0:40:29.89:0,30,763	0/0:9,0:23:42.10:0,42,538	0/1:12,12:26:39.62:586,0,40	1/1:16,13:30:30.74:583,31,0	1/1:3,9:11:18.06:369,18,0
chr10	9224092	.	AT	A	8050.88	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=10.643;DP=581;FS=7.926;HRun=2;HaplotypeScore=58.8337;InbreedingCoeff=0.9949;MQ=90.71;MQ0=1;MQRankSum=-4.115;QD=36.27;ReadPosRankSum=3.557;VQSLOD=5.2211;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:75.25:0,75,1124	1/1:0,12:12:36.12:467,36,0	0/0:23,0:23:63.18:0,63,888	0/0:24,0:23:65.88:0,66,864	0/0:10,0:10:27.09:0,27,404	0/0:31,0:31:90.30:0,90,1349	0/0:21,0:21:63.17:0,63,918	0/0:40,0:40:99:0,117,1734	0/0:21,0:21:60.20:0,60,895	0/0:18,0:18:54.18:0,54,809	0/0:12,0:12:36.12:0,36,538	1/1:0,22:22:57.02:740,57,0	1/1:0,21:21:51.17:662,51,0	1/1:0,22:22:63.20:818,63,0	0/0:23,0:23:69.22:0,69,1014	0/0:18,0:18:54.18:0,54,808	1/1:0,21:21:60.20:779,60,0	0/0:22,0:22:66.22:0,66,989	1/1:2,22:24:69.22:892,69,0	1/1:0,12:12:33.11:429,33,0	0/0:23,0:23:69.22:0,69,1012	1/1:0,17:17:51.17:662,51,0	0/0:8,0:8:24.07:0,24,341	0/0:24,0:24:70.68:0,71,950	0/0:16,0:16:48.16:0,48,718	1/1:1,23:24:27.26:851,27,0	1/1:0,43:43:99:1596,123,0	1/1:0,4:4:12.04:156,12,0
chr10	9226545	.	ATGC	A	184.62	PASS	AB=0.792;AC=11;AF=0.393;AN=28;BaseQRankSum=1.021;DP=124;FS=2.405;HRun=0;HaplotypeScore=49.7453;InbreedingCoeff=0.2279;MQ=49.10;MQ0=0;MQRankSum=-2.245;QD=4.10;ReadPosRankSum=1.774;VQSLOD=0.8892;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	0/0:5,0:4:2.92:0,3,17	./.	./.	./.	0/0:1,0:1:1.55:0,2,4	0/0:15,2:14:4.13:0,4,46	0/1:19,3:18:72.28:72,0,329	0/0:5,0:3:2.96:0,3,19	./.	1/1:0,1:1:2.96:19,3,0	0/0:0,2:2:0.89:0,1,2	0/1:11,1:12:0.01:1,0,0	./.	0/1:1,3:4:0.60:23,0,1	1/1:2,2:3:2.83:58,3,0	./.	./.	./.	./.	0/0:9,0:8:3.01:0,3,44	0/0:11,1:11:5.68:0,6,83	./.	1/1:1,0:1:3.01:54,3,0	./.	1/1:0,1:1:3.01:53,3,0
chr10	9226548	.	C	CCA	541.93	PASS	AB=0.937;AC=29;AF=0.558;AN=52;BaseQRankSum=5.918;DP=289;FS=19.610;HRun=0;HaplotypeScore=154.5415;InbreedingCoeff=0.3059;MQ=38.75;MQ0=11;MQRankSum=-2.053;QD=3.11;ReadPosRankSum=3.456;VQSLOD=0.9235;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:3,1:3:2.03:0,2,6	./.	./.	0/0:8,0:4:2.77:0,3,30	0/1:7,0:7:0.01:0,0,0	1/1:2,0:2:2.97:20,3,0	1/1:4,1:3:2.96:21,3,0	1/1:3,0:3:6.82:24,7,0	0/1:21,1:18:11.42:11,0,123	0/0:28,0:23:47.38:0,47,503	0/0:8,0:5:3:0,3,25	1/1:9,0:8:9.62:73,10,0	1/1:12,0:10:0.44:71,0,0	0/1:19,0:16:8.21:19,0,8	0/0:16,0:16:4.55:0,5,24	0/1:1,0:1:0:0,0,0	1/1:10,1:9:5.28:97,5,0	0/1:8,2:8:1.45:117,0,1	1/1:1,0:1:3.01:39,3,0	0/0:11,0:8:2.71:0,3,5	0/1:26,7:29:0:0,0,0	1/1:9,0:9:6.34:29,6,0	0/1:15,0:15:5.06:5,0,33	0/0:25,0:24:8.90:0,9,96	0/0:2,0:2:0.43:0,0,0	1/1:6,0:5:8.03:57,8,0	1/1:6,0:6:11.54:84,12,0	1/1:1,0:1:2.84:14,3,0
chr10	9226560	.	C	CA	162.67	PASS	AB=0.965;AC=12;AF=0.231;AN=52;BaseQRankSum=0.176;DP=673;FS=2.856;HRun=0;HaplotypeScore=172.8451;InbreedingCoeff=-0.0708;MQ=35.04;MQ0=39;MQRankSum=-0.545;QD=0.76;ReadPosRankSum=-1.705;VQSLOD=2.3219;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:15,1:14:2.97:0,3,20	./.	./.	0/0:16,0:4:6.34:0,6,65	0/1:18,0:16:9.35:17,0,9	0/0:11,1:12:2.97:0,3,8	0/0:24,2:23:8.15:0,8,73	0/0:37,1:20:33.40:0,33,191	0/0:39,0:33:37.35:0,37,428	0/0:62,1:41:66.39:0,66,1154	0/0:17,0:12:7.45:0,7,88	0/1:20,1:19:22.11:26,0,22	0/1:24,0:20:3.54:4,0,76	0/0:32,0:29:2.03:0,2,29	0/0:31,0:30:29.53:0,30,285	0/0:12,0:10:1.97:0,2,6	0/1:20,0:19:9.19:9,0,65	0/1:14,2:14:39.55:40,0,133	0/1:13,0:10:46.81:47,0,72	0/1:28,0:25:26.54:55,0,27	0/0:51,1:46:2.45:0,2,10	0/1:23,0:22:12.06:12,0,41	0/0:24,0:21:21.01:0,21,255	0/0:40,0:35:29.52:0,30,348	0/1:18,0:16:0.54:1,0,1	0/1:24,1:19:26.13:26,0,203	0/0:11,0:11:14.58:0,15,88	1/1:4,0:5:8.88:60,9,0
chr10	9226563	.	TAC	T	627.15	PASS	AB=0.905;AC=14;AF=0.269;AN=52;BaseQRankSum=1.612;DP=754;FS=0.656;HRun=0;HaplotypeScore=193.5971;InbreedingCoeff=-0.1086;MQ=34.84;MQ0=45;MQRankSum=-2.045;QD=1.65;ReadPosRankSum=-1.482;VQSLOD=2.5922;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:17,2:16:3.26:33,3,0	./.	./.	0/0:18,0:4:8.60:0,9,66	0/0:22,0:20:2.71:0,3,34	0/0:13,0:12:5.99:0,6,53	0/0:26,3:26:7.96:0,8,69	0/1:35,9:24:99:179,0,133	0/1:37,7:37:47.25:47,0,379	0/1:58,10:46:99:307,0,806	0/1:18,2:14:36.32:77,0,36	0/0:24,0:21:12.48:0,12,154	0/0:29,1:25:26.13:0,26,219	0/0:38,1:34:6.82:0,7,102	0/1:35,1:33:16.10:16,0,296	0/1:13,1:12:1.23:1,0,12	0/0:22,0:19:20.53:0,21,231	0/1:17,0:15:27.23:27,0,151	0/0:13,2:10:16.76:0,17,241	0/0:31,0:27:23.77:0,24,355	0/0:60,0:52:11.65:0,12,115	0/0:27,0:25:27.44:0,27,387	0/1:25,3:25:14.08:14,0,304	0/1:37,5:37:4.24:4,0,413	1/1:18,1:17:2.37:8,2,0	0/1:24,4:22:52.24:52,0,470	0/0:11,0:11:12.47:0,12,139	0/0:5,0:5:6.02:0,6,84
chr10	9226672	.	C	CCA	1214.70	PASS	AB=0.905;AC=17;AF=0.304;AN=56;BaseQRankSum=10.349;DP=1740;FS=3.561;HRun=0;HaplotypeScore=526.9061;InbreedingCoeff=-0.3064;MQ=36.11;MQ0=115;MQRankSum=-7.777;QD=1.36;ReadPosRankSum=-4.872;VQSLOD=-0.5990;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:59,10:62:99:180,0,449	0/1:33,1:29:2.53:3,0,493	1/1:44,0:3:2.04:6,2,0	0/1:69,0:4:26.43:26,0,28	0/1:41,5:40:14.22:14,0,367	0/1:37,8:40:99:234,0,295	0/0:66,2:58:44.42:0,44,435	0/0:104,4:48:23.26:0,23,547	0/1:78,8:68:71.55:72,0,1345	0/0:84,0:59:99:0,103,1568	0/0:36,0:28:35.73:0,36,406	0/1:56,10:59:99:154,0,741	0/0:59,6:55:31.58:0,32,902	0/1:61,6:60:30.38:30,0,563	0/0:49,4:46:30.49:0,30,766	0/1:66,8:68:99:230,0,738	0/1:48,6:47:26.94:27,0,640	0/1:40,7:46:99:244,0,728	0/1:29,4:21:14.83:15,0,323	0/0:41,2:39:48.49:0,48,592	0/0:146,10:133:85.30:0,85,992	0/0:76,3:72:99:0,117,1385	0/0:44,0:40:73.27:0,73,887	0/0:78,4:72:99:0,107,1273	0/1:61,2:56:16.20:16,0,594	0/1:53,5:45:97.68:98,0,631	0/1:21,0:21:22.16:22,0,229	0/0:10,0:9:14.22:0,14,135
chr10	9226730	.	CCAT	C	266.80	PASS	AB=0.985;AC=13;AF=0.232;AN=56;BaseQRankSum=3.628;DP=1128;FS=8.908;HRun=0;HaplotypeScore=319.8132;InbreedingCoeff=-0.1467;MQ=33.68;MQ0=123;MQRankSum=-2.777;QD=0.79;ReadPosRankSum=-2.084;VQSLOD=0.8983;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:29:4.41:0,4,255	0/0:16,0:12:15.17:0,15,240	0/0:68,0:1:3.01:0,3,67	0/0:61,0:2:3.01:0,3,30	0/0:18,0:14:6.02:0,6,72	0/1:24,0:19:1.18:1,0,542	0/1:41,1:33:28.13:28,0,288	0/0:62,0:25:39.76:0,40,369	0/0:94,0:70:99:0,165,3624	0/0:84,0:54:99:0,126,2879	0/0:22,0:17:29.82:0,30,664	0/1:31,0:26:5.91:6,0,401	0/1:39,1:32:35.69:36,0,343	0/1:39,1:36:35.52:36,0,444	0/0:60,0:43:74.76:0,75,1527	0/1:33,3:31:99:104,0,617	0/1:23,0:17:49:49,0,134	0/0:20,0:19:4.55:0,5,303	0/1:19,0:7:24.63:25,0,53	1/1:14,0:14:9.24:38,9,0	0/0:76,0:67:12.48:0,12,344	0/1:34,0:24:35.34:35,0,112	0/0:51,0:43:61.06:0,61,1304	0/0:78,0:64:90:0,90,1659	0/1:24,0:20:51.19:51,0,61	0/0:35,0:27:3.63:0,4,624	0/0:9,0:7:15:0,15,248	0/1:6,0:5:0.48:0,0,96
chr10	9226733	.	TAC	T	1094.20	PASS	AB=0.865;AC=21;AF=0.375;AN=56;BaseQRankSum=2.099;DP=1126;FS=47.087;HRun=0;HaplotypeScore=312.7450;InbreedingCoeff=-0.4911;MQ=34.03;MQ0=117;MQRankSum=-3.810;QD=1.51;ReadPosRankSum=-1.384;VQSLOD=1.1148;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:28,6:31:99:99,0,121	0/0:13,0:12:14.87:0,15,152	0/0:64,0:1:3.01:0,3,35	0/0:64,0:3:3.01:0,3,50	0/0:12,4:15:3:0,3,28	0/1:22,2:20:13.22:13,0,230	0/1:29,15:33:76.04:76,0,122	0/1:68,3:29:18.55:84,0,19	0/0:89,3:69:99:0,106,1639	0/1:70,7:52:99:122,0,1129	0/0:21,1:17:20.93:0,21,290	0/1:25,6:28:99:109,0,209	0/1:37,2:31:78.24:78,0,156	0/1:33,5:35:75.95:76,0,173	0/1:52,7:42:18.42:18,0,644	0/1:29,4:31:49.46:49,0,244	0/1:23,2:21:25.85:26,0,92	0/1:14,3:16:63.89:64,0,119	0/1:15,1:5:13.24:34,0,13	1/1:14,2:15:2.96:23,3,0	0/0:67,4:63:16.45:0,16,161	0/1:32,2:24:6.45:6,0,18	0/0:49,4:45:30.67:0,31,710	0/1:62,15:64:99:214,0,642	0/1:13,8:17:15.82:96,0,16	0/1:34,2:28:9.90:10,0,298	0/1:8,0:6:2.97:3,0,77	0/1:6,1:8:40.87:46,0,41
chr10	9226783	.	T	TAC	26586.34	PASS	AB=0.895;AC=47;AF=0.839;AN=56;BaseQRankSum=1.488;DP=1352;FS=22.806;HRun=0;HaplotypeScore=358.2185;InbreedingCoeff=0.0712;MQ=46.14;MQ0=62;MQRankSum=-3.700;QD=20.50;ReadPosRankSum=1.734;VQSLOD=3.9485;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:31,26:56:99:1867,131,0	1/1:5,16:20:36.12:566,36,0	0/1:43,0:13:21.88:22,0,189	0/0:52,0:21:26.08:0,26,435	1/1:27,17:42:32.74:493,33,0	1/1:12,19:29:75.23:1137,75,0	1/1:32,14:41:51.13:1113,51,0	1/1:38,16:21:26.80:747,27,0	0/1:63,0:54:99:447,0,792	0/1:69,15:71:99:961,0,1089	0/1:23,5:26:99:144,0,428	1/1:36,24:56:99:1901,139,0	1/1:37,26:51:99:1994,138,0	1/1:29,29:53:99:1996,135,0	0/1:51,10:47:99:403,0,755	1/1:42,29:60:99:2031,114,0	1/1:21,25:43:99:1563,105,0	1/1:20,15:34:12.42:1039,12,0	1/1:11,7:11:33.11:513,33,0	1/1:21,14:34:53.81:731,54,0	1/1:54,60:105:99:2212,152,0	1/1:17,20:36:56.82:877,57,0	0/1:33,6:38:99:230,0,600	0/1:62,9:58:99:190,0,853	1/1:18,17:34:63.12:926,63,0	1/1:27,21:43:99:1630,117,0	1/1:7,13:19:33.10:483,33,0	1/1:5,5:9:27.08:373,27,0
chr10	9226787	.	C	CAT	23564.92	PASS	AB=0.930;AC=45;AF=0.804;AN=56;BaseQRankSum=7.649;DP=1415;FS=10.091;HRun=0;HaplotypeScore=384.5110;InbreedingCoeff=-0.0647;MQ=46.70;MQ0=54;MQRankSum=-2.459;QD=17.37;ReadPosRankSum=8.213;VQSLOD=4.0766;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:40,20:60:73.01:1633,73,0	1/1:17,3:19:36.08:449,36,0	0/1:53,0:15:73.63:74,0,213	0/0:58,0:27:3.15:0,3,574	1/1:25,21:44:32.47:414,32,0	1/1:26,9:33:59.98:944,60,0	1/1:29,20:44:52.69:1119,53,0	1/1:45,5:23:14.63:532,15,0	0/1:44,17:51:99:814,0,1084	0/1:86,0:74:99:630,0,1485	0/1:27,0:26:49.47:49,0,569	1/1:36,25:57:99:1997,122,0	1/1:40,25:54:99:1947,111,0	1/1:48,17:59:92.34:1672,92,0	0/1:59,1:48:99:178,0,998	1/1:48,25:62:46.08:1972,46,0	1/1:38,13:48:66.81:1329,67,0	0/1:30,11:40:88.10:949,0,88	1/1:16,7:14:15.05:371,15,0	1/1:20,18:37:53.52:794,54,0	1/1:91,27:107:62.18:1703,62,0	1/1:29,12:40:36.84:701,37,0	0/1:42,0:41:99:141,0,809	0/1:69,0:56:69.68:70,0,1094	1/1:27,10:36:63.09:787,63,0	1/1:31,19:45:69.25:1532,69,0	0/1:17,5:21:0.86:407,0,1	1/1:8,5:12:26.98:357,27,0
chr10	9226788	.	A	ATG	9638.74	PASS	AB=0.984;AC=33;AF=0.589;AN=56;BaseQRankSum=11.990;DP=1414;FS=57.079;HRun=0;HaplotypeScore=428.4593;InbreedingCoeff=-0.2351;MQ=46.84;MQ0=53;MQRankSum=-4.019;QD=7.63;ReadPosRankSum=11.001;VQSLOD=2.1656;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:61,0:61:30.05:656,0,30	1/1:20,0:19:28.59:205,29,0	0/1:54,1:15:78.94:79,0,279	0/1:56,2:27:24.13:24,0,716	1/1:47,0:45:19.97:155,20,0	1/1:37,0:35:36.48:405,36,0	0/1:46,0:41:2.13:498,0,2	0/1:47,0:22:38.24:131,0,38	0/1:60,0:50:99:423,0,1248	0/1:78,9:75:99:393,0,1791	0/0:22,3:25:32.02:0,32,704	1/1:61,0:58:73.40:925,73,0	1/1:66,0:55:11.92:821,12,0	0/1:65,0:58:19.33:649,0,19	0/0:60,0:48:25.68:0,26,1171	0/1:74,0:63:60.41:870,0,60	0/1:52,0:49:1.33:523,0,1	0/1:41,0:40:99:338,0,232	0/1:26,0:17:44.37:111,0,44	1/1:37,0:37:47.43:411,47,0	0/1:119,0:108:99:562,0,129	0/1:41,0:40:20.69:230,0,21	0/1:35,5:39:66.60:67,0,940	0/0:63,3:54:19.22:0,19,1282	1/1:35,0:34:2.05:278,2,0	0/1:52,0:46:65.15:550,0,65	0/1:22,0:21:46.61:175,0,47	1/1:13,0:12:18.30:160,18,0
chr10	9226790	.	A	ACC	11711.38	PASS	AB=0.997;AC=39;AF=0.696;AN=56;BaseQRankSum=9.629;DP=1464;FS=11.787;HRun=2;HaplotypeScore=446.4235;InbreedingCoeff=-0.2097;MQ=47.36;MQ0=45;MQRankSum=-3.555;QD=8.33;ReadPosRankSum=12.200;VQSLOD=0.0071;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:62,0:62:73.07:876,73,0	1/1:19,0:19:34.98:324,35,0	0/1:58,0:18:4.18:4,0,288	0/0:58,0:27:68.80:0,69,699	0/1:48,0:46:7.18:199,0,7	1/1:41,0:39:10.11:539,10,0	0/1:47,0:42:5.51:486,0,6	0/1:45,0:23:26.32:337,0,26	0/1:63,0:53:99:116,0,924	0/1:88,1:79:99:321,0,1494	0/1:27,0:27:54.18:54,0,496	1/1:64,0:61:78.21:859,78,0	1/1:70,0:60:10.72:877,11,0	1/1:66,1:61:54.70:1014,55,0	0/1:63,0:51:99:172,0,919	1/1:74,1:64:51.04:936,51,0	1/1:52,0:49:57.82:772,58,0	0/1:42,0:41:99:419,0,147	0/1:26,0:17:80.81:205,0,81	1/1:39,1:40:26.14:321,26,0	1/1:121,0:114:12.01:895,12,0	0/1:43,0:41:3.70:413,0,4	0/1:41,0:40:72.95:73,0,738	0/1:66,0:56:64.64:65,0,1033	1/1:36,0:35:32.81:460,33,0	0/1:56,0:50:27.30:571,0,27	0/1:23,0:22:11.42:221,0,11	1/1:13,0:12:25.23:182,25,0
chr10	9226936	.	C	CCA	1765	PASS	AB=0.877;AC=23;AF=0.411;AN=56;BaseQRankSum=-2.641;DP=827;FS=34.850;HRun=0;HaplotypeScore=195.3130;InbreedingCoeff=-0.2340;MQ=37.10;MQ0=69;MQRankSum=-2.098;QD=3.22;ReadPosRankSum=-3.065;VQSLOD=1.1072;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:31,6:33:92.14:182,0,92	0/0:11,1:7:2.88:0,3,15	0/0:41,0:6:9.50:0,10,116	0/0:52,0:8:14.40:0,14,118	1/1:16,6:15:12.04:185,12,0	1/1:17,3:16:12.66:132,13,0	0/1:28,3:22:7.15:7,0,277	0/0:25,0:7:2.68:0,3,11	0/1:37,6:30:99:182,0,345	0/1:22,5:16:93.90:112,0,94	0/0:9,3:8:3.01:0,3,38	0/1:30,3:25:58:112,0,58	0/1:34,3:27:99:213,0,235	0/1:30,7:24:57.60:98,0,58	1/1:21,13:14:3.01:46,3,0	0/1:19,3:14:30.13:30,0,138	0/1:27,3:23:61.49:76,0,61	0/1:24,8:30:99:126,0,279	0/1:16,0:9:14.92:15,0,20	0/0:33,1:25:17.44:0,17,147	0/0:43,2:32:1.48:0,1,89	0/0:35,0:31:23.37:0,23,194	0/0:15,5:13:2.69:0,3,38	0/1:28,12:21:8.13:87,0,8	1/1:16,2:14:7.23:50,7,0	0/1:35,2:21:78.33:78,0,183	0/1:12,3:10:6.84:143,0,7	0/1:9,1:7:29.18:51,0,29
chr10	9226953	.	CAT	C	234.36	PASS	AB=0.935;AC=13;AF=0.232;AN=56;BaseQRankSum=8.619;DP=754;FS=56.924;HRun=0;HaplotypeScore=190.8099;InbreedingCoeff=-0.3197;MQ=37.51;MQ0=51;MQRankSum=-4.855;QD=0.70;ReadPosRankSum=0.030;VQSLOD=0.8398;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,1:30:11.78:0,12,885	0/1:9,0:6:32.81:33,0,49	0/0:43,0:5:9.50:0,10,170	0/0:51,0:6:11.48:0,11,144	0/0:17,1:13:18.05:0,18,314	0/0:21,0:16:15.42:0,15,291	0/1:36,3:28:52.84:53,0,610	0/0:39,1:18:0.01:0,0,677	0/1:35,3:27:31.54:32,0,1057	0/0:33,0:22:57.19:0,57,1023	0/0:9,0:7:9.03:0,9,148	0/1:22,2:19:33.87:34,0,315	0/1:29,1:21:0.98:1,0,680	0/1:28,1:21:31.77:32,0,208	0/0:21,2:8:18.06:0,18,335	0/0:22,0:16:29.81:0,30,788	0/0:22,0:15:26.96:0,27,476	0/1:32,0:27:11.73:12,0,907	0/1:26,0:13:18.91:19,0,390	0/1:25,2:24:17.13:17,0,211	0/0:44,3:35:18.02:0,18,320	0/1:24,3:23:42.62:43,0,144	0/0:12,1:8:11.89:0,12,196	0/0:34,1:18:29.95:0,30,543	0/0:8,0:6:6.02:0,6,109	0/1:33,1:26:11.09:11,0,784	0/1:8,4:10:55.78:56,0,210	0/1:7,1:6:39.01:39,0,159
chr10	9226982	.	CCA	C	1606.22	PASS	AB=0.746;AC=14;AF=0.250;AN=56;BaseQRankSum=5.659;DP=871;FS=14.137;HRun=0;HaplotypeScore=251.6461;InbreedingCoeff=0.1268;MQ=34.99;MQ0=53;MQRankSum=-6.227;QD=5.72;ReadPosRankSum=1.460;VQSLOD=1.6724;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:35:57.14:0,57,794	1/1:5,3:6:0.89:40,1,0	0/0:48,0:4:5.51:0,6,34	0/1:41,0:3:16.57:17,0,55	0/0:35,0:30:21.07:0,21,346	0/0:26,0:21:25.49:0,25,366	0/0:42,0:32:41.47:0,41,511	0/0:72,0:45:89:0,89,1195	0/0:35,1:26:23:0,23,900	0/0:44,0:33:78.26:0,78,1238	0/0:12,0:11:12.04:0,12,201	0/1:17,7:22:40.57:132,0,41	0/1:19,12:26:63.80:235,0,64	0/1:25,12:32:35.89:190,0,36	0/0:35,0:20:50.20:0,50,760	0/0:31,0:26:59.11:0,59,834	0/1:14,8:14:86.82:118,0,87	0/0:24,0:20:44.17:0,44,546	0/0:17,0:6:2.98:0,3,22	0/1:12,11:23:18.87:32,0,19	0/0:42,0:27:4.36:0,4,60	1/1:20,11:28:14:135,14,0	0/0:24,0:19:39.01:0,39,565	0/0:42,0:26:63.17:0,63,965	0/0:15,0:14:5:0,5,56	0/1:19,13:25:85.80:368,0,86	1/1:10,10:19:16.22:297,16,0	0/1:3,7:8:8.49:203,0,8
chr10	9227022	.	ATACC	A	7008.85	PASS	AB=0.698;AC=19;AF=0.339;AN=56;BaseQRankSum=4.841;DP=896;FS=33.765;HRun=0;HaplotypeScore=339.1522;InbreedingCoeff=-0.5211;MQ=45.41;MQ0=18;MQRankSum=-11.604;QD=11.74;ReadPosRankSum=-0.266;VQSLOD=2.6955;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:24,15:36:39.97:40,0,890	0/1:5,13:17:53.31:510,0,53	0/0:46,0:23:37.35:0,37,1080	0/0:38,0:21:57.16:0,57,1179	0/1:27,19:44:27.91:28,0,395	0/1:13,12:24:99:326,0,463	0/1:15,16:27:99:522,0,421	0/1:45,17:40:99:987,0,1185	0/0:36,0:33:93.64:0,94,2562	0/0:36,0:35:97.79:0,98,2447	0/0:16,0:16:17.53:0,18,414	0/1:10,20:26:99:723,0,205	0/1:19,12:25:99:309,0,656	0/1:20,23:32:99:452,0,496	0/0:37,0:34:93.27:0,93,2412	0/1:25,9:32:99:290,0,1235	0/1:14,7:15:99:248,0,150	0/1:13,2:14:97.51:98,0,416	0/1:8,4:7:99:167,0,321	0/1:16,19:35:52.08:52,0,127	0/0:24,1:20:6.96:0,7,69	0/1:23,26:44:99:261,0,290	0/0:24,0:24:60.05:0,60,1580	0/0:40,0:32:93.32:0,93,2506	0/1:11,15:25:79.93:292,0,80	0/1:24,19:37:99:963,0,1315	0/1:10,14:23:99:572,0,553	0/1:8,5:12:99:171,0,424
chr10	9227036	.	A	AT	2055.18	PASS	AB=0.799;AC=18;AF=0.321;AN=56;BaseQRankSum=8.417;DP=830;FS=9.478;HRun=0;HaplotypeScore=330.9423;InbreedingCoeff=-0.4105;MQ=46.86;MQ0=9;MQRankSum=-8.476;QD=3.94;ReadPosRankSum=0.004;VQSLOD=2.0091;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:23,12:33:30.20:208,0,30	0/0:20,2:22:34.13:0,34,521	0/0:38,0:24:63.15:0,63,786	0/0:36,0:21:42.69:0,43,704	0/1:34,13:48:99:130,0,105	0/1:14,5:18:73.67:74,0,197	0/0:23,7:27:9.59:0,10,507	0/1:44,8:37:90.15:90,0,1028	0/0:28,0:28:67.69:0,68,999	0/0:38,0:37:99:0,102,1394	0/0:15,0:14:21.03:0,21,293	0/1:22,8:26:59.12:59,0,403	0/1:17,12:23:99:247,0,185	0/1:29,13:30:99:194,0,309	0/0:35,0:33:90.26:0,90,1223	0/1:16,7:22:99:248,0,309	0/1:11,3:10:68.78:69,0,125	0/1:11,1:12:39.70:40,0,183	0/1:7,2:7:56.16:56,0,187	0/1:31,3:34:0.94:1,0,37	0/1:16,7:21:0.01:0,0,1	0/1:35,10:42:99:101,0,127	0/0:24,0:24:56.23:0,56,796	0/0:41,0:34:99:0,99,1324	0/1:18,5:23:29.50:30,0,124	0/1:31,14:37:99:403,0,784	0/1:19,8:24:99:161,0,363	0/1:5,3:8:99:99,0,144
chr10	9227040	.	TAG	T	848.02	PASS	AB=0.833;AC=14;AF=0.250;AN=56;BaseQRankSum=9.471;DP=824;FS=6.719;HRun=0;HaplotypeScore=336.2732;InbreedingCoeff=-0.3379;MQ=45.56;MQ0=6;MQRankSum=-8.458;QD=2.23;ReadPosRankSum=1.315;VQSLOD=1.1822;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:30,6:33:77.26:77,0,303	0/0:20,2:22:41.95:0,42,727	0/0:38,0:23:56.43:0,56,850	0/0:32,0:19:48.30:0,48,841	0/1:36,8:44:4.90:5,0,217	0/1:17,3:19:55.74:56,0,464	0/0:29,2:27:19.38:0,19,829	0/0:43,4:34:22.77:0,23,1444	0/0:28,0:28:78.20:0,78,1432	0/0:43,0:42:99:0,119,1947	0/0:16,0:15:23.06:0,23,361	0/0:25,5:26:12.53:0,13,670	0/1:23,7:24:95.83:96,0,366	0/1:33,9:30:40.77:41,0,688	0/0:33,0:31:87.27:0,87,1602	0/1:16,7:22:99:129,0,508	0/1:10,2:9:30.24:30,0,158	0/1:11,1:11:39.47:39,0,241	0/1:6,2:7:46.14:46,0,213	0/0:32,1:33:9.42:0,9,129	0/0:23,1:22:5.69:0,6,93	0/1:36,8:41:58.96:59,0,214	0/0:26,0:26:63:0,63,1126	0/0:40,0:34:93.26:0,93,1692	0/1:21,4:25:29.92:30,0,333	0/1:35,9:37:99:238,0,1125	0/1:21,8:25:92.60:93,0,575	0/1:8,3:10:63.46:63,0,248
chr10	9227067	.	CCA	C	4384.58	PASS	AB=0.749;AC=35;AF=0.625;AN=56;BaseQRankSum=3.512;DP=757;FS=4.813;HRun=0;HaplotypeScore=259.6128;InbreedingCoeff=0.5878;MQ=37.87;MQ0=30;MQRankSum=-7.737;QD=8.80;ReadPosRankSum=-2.069;VQSLOD=4.0413;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:23,14:37:8.12:192,8,0	1/1:9,14:23:27.73:430,28,0	0/0:54,0:17:29.93:0,30,416	0/0:45,0:14:22.22:0,22,234	1/1:17,16:32:17.95:219,18,0	0/1:7,7:14:19.30:78,0,19	1/1:15,11:23:21.57:241,22,0	1/1:27,10:32:44.14:510,44,0	0/0:13,0:26:63.04:0,63,606	0/0:12,0:33:83.69:0,84,709	0/0:12,0:15:26.52:0,27,284	1/1:11,9:19:21.52:175,22,0	1/1:10,13:21:27.04:312,27,0	1/1:13,11:14:11.99:131,12,0	0/0:10,0:23:54.01:0,54,475	1/1:11,11:22:26.16:313,26,0	1/1:6,7:10:6.02:71,6,0	0/1:9,1:12:53.56:54,0,62	0/1:18,2:8:28.66:60,0,29	1/1:18,14:29:8.76:110,9,0	1/1:20,7:25:9.19:95,9,0	0/1:18,19:32:4.80:48,0,5	0/0:13,0:24:41.96:0,42,436	0/0:10,0:25:65.99:0,66,584	1/1:11,14:26:21.58:290,22,0	1/1:14,20:27:10.33:513,10,0	1/1:3,15:15:27.04:314,27,0	0/1:3,8:11:13.72:231,0,14
chr10	9227078	.	C	CAT	1873.32	PASS	AB=0.987;AC=14;AF=0.250;AN=56;BaseQRankSum=-4.420;DP=729;FS=20.936;HRun=0;HaplotypeScore=237.8008;InbreedingCoeff=-0.1591;MQ=41.31;MQ0=30;MQRankSum=5.258;QD=6.08;ReadPosRankSum=6.400;VQSLOD=1.6727;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:38,1:38:27.67:28,0,194	0/1:23,1:24:14.64:15,0,268	0/0:52,0:18:43.20:0,43,512	0/0:48,0:15:32.75:0,33,337	0/0:28,1:29:20.76:0,21,145	0/1:13,0:12:1.89:2,0,99	0/1:19,2:18:8.72:9,0,134	0/0:32,0:26:44.93:0,45,432	0/1:26,0:23:48.56:379,0,49	1/1:33,0:33:3.05:474,3,0	0/1:15,0:13:61.20:133,0,61	0/1:20,0:20:3.16:3,0,171	0/0:21,0:18:32.50:0,33,207	0/0:19,0:9:13.84:0,14,94	0/1:28,0:22:12.09:335,0,12	0/0:21,0:19:24.02:0,24,233	0/0:16,0:13:26.70:0,27,182	0/1:11,0:11:46.10:75,0,46	0/1:20,0:10:33.06:33,0,103	0/0:30,0:27:22.94:0,23,166	0/0:27,1:24:13.78:0,14,105	0/0:28,1:27:11.88:0,12,86	0/1:23,0:23:99:162,0,196	0/1:35,0:30:99:375,0,152	0/0:22,2:24:25.94:0,26,174	0/0:34,0:28:15.47:0,15,386	0/0:21,0:18:20.78:0,21,218	0/0:16,0:15:20.61:0,21,225
chr10	9227099	.	AT	A	7289.64	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=3.558;DP=600;FS=19.434;HRun=7;HaplotypeScore=151.8394;InbreedingCoeff=0.9845;MQ=53.79;MQ0=6;MQRankSum=-6.361;QD=18.74;ReadPosRankSum=-0.376;VQSLOD=3.0820;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,25:28:56.60:567,57,0	1/1:3,16:19:51.04:498,51,0	0/0:28,0:13:32.94:0,33,356	0/0:32,0:17:32.59:0,33,371	1/1:5,20:24:32.50:331,33,0	1/1:2,10:11:27.06:275,27,0	1/1:6,14:17:36.04:352,36,0	1/1:6,26:28:66.15:672,66,0	0/0:26,0:23:51.09:0,51,606	0/0:40,0:40:99:0,108,1335	0/0:13,0:13:36.12:0,36,452	1/1:2,13:13:27.05:275,27,0	1/1:5,13:15:30.06:303,30,0	1/1:2,12:9:23.96:222,24,0	0/0:24,0:17:39:0,39,431	1/1:5,16:20:48.10:483,48,0	1/1:3,13:14:26.82:275,27,0	1/1:2,10:11:27.06:275,27,0	1/1:2,12:13:39.08:392,39,0	1/1:4,21:24:47.87:470,48,0	1/1:6,7:12:8.86:91,9,0	1/1:3,21:22:32.81:322,33,0	0/0:24,0:24:69.17:0,69,837	0/0:24,0:22:63.16:0,63,763	1/1:4,17:21:45.07:450,45,0	1/1:9,18:22:13.32:435,13,0	1/1:3,15:16:27.05:275,27,0	1/1:2,12:13:33.02:324,33,0
chr10	9228743	.	ATGTGTGTGTGTGTGTGTGTGTG	A	17936.54	PASS	AB=0.653;AC=43;AF=0.768;AN=56;BaseQRankSum=7.749;DP=655;FS=9.546;HRun=0;HaplotypeScore=315.6512;InbreedingCoeff=0.5968;MQ=61.80;MQ0=11;MQRankSum=-4.664;QD=35.17;ReadPosRankSum=3.162;VQSLOD=1.8972;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:15,19:34:18.06:1044,18,0	1/1:5,0:10:15.05:767,15,0	0/0:37,0:25:12.04:0,12,253	0/0:32,0:20:21.04:0,21,495	1/1:10,7:20:9.03:478,9,0	1/1:1,11:12:9.03:522,9,0	0/0:15,11:26:6.02:0,6,114	1/1:25,4:27:15.03:248,15,0	0/0:14,0:20:27.56:0,28,1049	1/1:11,7:19:24.08:934,24,0	0/1:10,8:18:9.99:681,0,10	1/1:17,0:29:24.08:1227,24,0	1/1:10,0:20:14.20:766,14,0	1/1:13,0:28:18.06:921,18,0	1/1:9,17:29:39.13:2201,39,0	1/1:11,17:29:21.07:1198,21,0	1/1:15,0:26:9.03:461,9,0	0/1:7,7:14:99:188,0,211	1/1:8,0:12:5.79:107,6,0	1/1:7,0:20:27.09:1381,27,0	0/0:30,0:30:15.52:0,16,1285	1/1:6,0:20:9.03:459,9,0	1/1:5,11:17:12.04:676,12,0	1/1:20,17:37:8.60:376,9,0	1/1:12,11:22:18.06:1044,18,0	1/1:14,0:26:35.22:790,35,0	0/1:7,1:21:1.91:1313,0,2	1/1:12,0:13:3.01:154,3,0
chr10	9228768	.	T	TGC	118.79	PASS	AB=0.937;AC=7;AF=0.125;AN=56;BaseQRankSum=1.781;DP=582;FS=9.392;HRun=0;HaplotypeScore=242.7011;InbreedingCoeff=-0.1470;MQ=42.98;MQ0=23;MQRankSum=-1.436;QD=0.82;ReadPosRankSum=4.372;VQSLOD=0.6909;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:45:62.71:0,63,405	0/0:9,0:9:8.98:0,9,62	0/0:19,0:5:11.95:0,12,92	0/0:26,0:11:29.94:0,30,265	0/1:20,0:20:3.78:4,0,80	0/0:13,0:13:8.63:0,9,44	0/0:27,0:26:26.53:0,27,179	0/0:21,0:18:29.57:0,30,337	0/0:20,0:20:32.44:0,32,268	0/0:21,0:19:53.09:0,53,373	0/0:14,0:14:20.43:0,20,124	0/0:22,0:21:7.02:0,7,80	0/0:17,0:15:15.56:0,16,71	0/0:20,0:19:8.86:0,9,77	0/0:27,0:27:42.90:0,43,221	0/0:27,0:27:31.95:0,32,184	0/1:21,0:19:3.54:4,0,38	0/0:17,0:16:4.77:0,5,116	0/1:6,0:6:7.87:8,0,29	0/1:18,0:18:0.57:1,0,57	0/1:8,29:36:36.73:148,0,37	0/0:18,0:19:0.25:0,0,30	0/0:22,0:22:23.48:0,23,130	0/0:30,0:30:18.11:0,18,102	0/0:19,0:18:23.13:0,23,124	0/1:22,0:22:48.03:48,0,110	0/1:20,0:18:14.44:14,0,58	0/0:2,0:2:2.84:0,3,14
chr10	9228970	.	T	TC	725.20	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-7.403;DP=746;FS=3.035;HRun=4;HaplotypeScore=167.3412;InbreedingCoeff=0.9843;MQ=88.97;MQ0=0;MQRankSum=-0.194;QD=34.53;ReadPosRankSum=1.717;VQSLOD=2.0115;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,147,1600	0/0:15,0:15:45.09:0,45,476	0/0:27,0:27:63.12:0,63,690	0/0:33,0:33:81.17:0,81,884	0/0:21,0:21:57.15:0,57,625	0/0:25,0:25:63.17:0,63,690	0/0:23,0:23:63.09:0,63,659	0/0:28,0:28:72.18:0,72,782	1/1:1,20:21:60.20:820,60,0	0/0:37,0:37:99:0,99,1085	0/0:16,0:16:45.12:0,45,493	0/0:31,0:31:90.24:0,90,986	0/0:23,0:23:63.17:0,63,689	0/0:27,0:27:75.10:0,75,804	0/0:15,0:15:42.11:0,42,460	0/0:34,0:34:96.20:0,96,1030	0/0:30,0:30:78.18:0,78,843	0/0:24,0:24:72.19:0,72,789	0/0:15,0:15:39.10:0,39,427	0/0:31,0:31:84.22:0,84,920	0/0:47,0:47:99:0,117,1327	0/0:31,0:31:87.23:0,87,952	0/0:25,0:25:60.16:0,60,657	0/0:27,0:27:72.19:0,72,788	0/0:18,0:18:51.14:0,51,559	0/0:30,0:30:84.23:0,84,921	0/0:35,0:35:87.21:0,87,942	0/0:5,0:5:15.04:0,15,164
chr10	9229068	.	T	TC	23119.26	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-8.321;DP=761;FS=4.658;HRun=3;HaplotypeScore=83.5524;InbreedingCoeff=0.9713;MQ=84.32;MQ0=0;MQRankSum=-6.244;QD=36.01;ReadPosRankSum=4.041;VQSLOD=5.3942;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,42:44:99:1637,117,0	1/1:2,13:15:33.11:462,33,0	0/0:32,0:32:87.11:0,87,983	0/0:20,0:20:42.10:0,42,484	1/1:1,35:36:84.20:1150,84,0	1/1:2,32:34:84.28:1176,84,0	1/1:3,21:24:57.19:798,57,0	1/1:2,24:26:75.23:1017,75,0	0/0:24,0:24:69.21:0,69,828	1/1:0,30:30:84.22:1104,84,0	1/1:1,22:23:45.15:630,45,0	1/1:0,43:43:99:1638,117,0	1/1:0,25:25:72.24:1008,72,0	1/1:1,22:23:60.20:839,60,0	1/1:1,25:26:75.25:1050,75,0	1/1:1,21:22:63.21:882,63,0	1/1:0,16:16:48.16:672,48,0	1/1:0,14:14:36.12:504,36,0	1/1:5,23:28:72.18:940,72,0	1/1:2,29:31:69.23:965,69,0	0/0:43,0:43:99:0,123,1475	1/1:1,14:15:39.13:546,39,0	1/1:2,28:30:78.26:1083,78,0	1/1:3,29:32:81.27:1134,81,0	1/1:2,22:24:60.20:840,60,0	1/1:2,41:43:99:1699,123,0	1/1:2,34:36:90.17:1260,90,0	1/1:0,2:2:6.02:84,6,0
chr10	9230283	.	TA	T	15327.46	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=2.094;DP=732;FS=14.744;HRun=9;HaplotypeScore=75.6588;InbreedingCoeff=0.9964;MQ=81.54;MQ0=0;MQRankSum=-5.005;QD=23.12;ReadPosRankSum=4.226;VQSLOD=4.3146;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,25:29:65.96:594,66,0	1/1:2,9:11:18.01:165,18,0	0/0:27,0:26:41.90:0,42,415	0/0:15,0:16:26.09:0,26,333	1/1:1,30:31:80.96:727,81,0	1/1:5,31:36:84.04:769,84,0	1/1:0,11:12:35.06:308,35,0	1/1:4,30:34:90:810,90,0	0/0:25,1:26:44.74:0,45,761	1/1:2,32:34:96.05:879,96,0	1/1:4,26:30:74.99:678,75,0	1/1:1,20:21:48.03:439,48,0	1/1:1,30:31:87.05:796,87,0	1/1:2,26:28:63.03:577,63,0	1/1:1,30:31:78.04:714,78,0	1/1:4,25:29:72.03:659,72,0	1/1:0,22:22:54.03:494,54,0	1/1:1,14:16:35.05:308,35,0	1/1:4,18:22:51:462,51,0	1/1:1,38:39:99:1016,111,0	1/1:4,26:30:72.04:659,72,0	1/1:2,24:26:62.97:568,63,0	1/1:3,28:31:78.04:714,78,0	1/1:1,18:19:54.03:494,54,0	1/1:0,21:21:60.03:549,60,0	1/1:3,31:34:93.05:851,93,0	1/1:2,32:34:86.91:796,87,0	1/1:0,12:12:33.02:302,33,0
chr10	9231584	.	T	TTGTGTGTGTG	618.79	PASS	AB=0.775;AC=6;AF=0.107;AN=56;BaseQRankSum=-0.368;DP=895;FS=3.361;HRun=0;HaplotypeScore=276.7824;InbreedingCoeff=0.2664;MQ=58.20;MQ0=19;MQRankSum=-3.633;QD=3.82;ReadPosRankSum=-6.019;VQSLOD=1.0102;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:34:8.60:0,9,1230	0/0:6,0:15:27.06:0,27,327	0/0:68,0:27:22.67:0,23,419	0/1:37,0:19:22.56:23,0,220	0/0:33,0:34:70.11:0,70,1802	0/0:26,0:27:24.15:0,24,1052	0/0:14,0:14:21.48:0,21,555	0/0:41,0:42:40.20:0,40,1259	1/1:15,19:38:20.28:622,20,0	0/0:14,0:32:51.17:0,51,1140	0/0:4,0:23:57.19:0,57,1202	0/0:12,0:34:41.89:0,42,603	0/0:17,0:33:50.61:0,51,793	0/0:12,0:32:30.86:0,31,416	0/0:13,0:38:69.22:0,69,1531	0/0:38,0:37:41.53:0,42,2060	0/0:15,0:42:45.02:0,45,913	0/0:9,0:9:12:0,12,286	0/1:18,0:22:49.62:50,0,133	0/1:12,0:25:1.59:2,0,417	0/0:51,0:53:99:0,102,2622	0/0:14,0:37:66.59:0,67,752	0/0:10,0:22:36.12:0,36,807	0/0:4,0:29:60.20:0,60,1306	0/0:26,0:28:63.04:0,63,1825	0/1:12,0:37:45.98:46,0,618	0/0:13,0:34:50.89:0,51,602	0/0:1,0:9:18.50:0,18,174
chr10	9234262	.	TTC	T	733.69	PASS	AB=0.848;AC=15;AF=0.268;AN=56;BaseQRankSum=4.412;DP=391;FS=10.477;HRun=0;HaplotypeScore=122.5835;InbreedingCoeff=-0.4140;MQ=81.09;MQ0=0;MQRankSum=-3.841;QD=3.74;ReadPosRankSum=-5.028;VQSLOD=-0.4894;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:8.97:0,9,85	0/1:6,1:7:24.44:24,0,91	0/0:35,0:26:48.20:0,48,605	0/0:25,0:21:16.52:0,17,467	0/0:9,0:9:8.12:0,8,141	0/0:8,0:8:14.96:0,15,136	0/0:11,0:11:13.64:0,14,279	0/0:17,0:17:44.87:0,45,473	0/1:8,0:13:36.62:37,0,272	0/1:8,2:10:62.60:63,0,161	0/1:13,2:15:35.75:36,0,139	0/1:9,1:10:57.25:57,0,140	0/0:23,0:23:7.50:0,7,342	0/1:7,3:10:94.53:103,0,95	0/1:13,5:18:99:144,0,176	0/0:10,0:10:19.26:0,19,252	0/1:18,0:18:21.92:22,0,320	0/0:3,0:3:8.94:0,9,89	0/1:4,3:7:66.14:66,0,92	0/1:18,0:18:42.87:43,0,169	0/0:9,0:9:9.46:0,9,95	0/1:15,2:17:41.10:41,0,419	0/1:13,2:14:72.83:73,0,185	0/1:16,1:17:81.86:82,0,108	0/0:4,0:4:2.99:0,3,24	0/1:16,3:19:55.54:56,0,353	0/0:23,0:23:0.73:0,1,316	0/1:1,1:2:15.96:40,0,16
chr10	9234264	.	C	CCCCTCCCCCT	20102.92	PASS	AB=1.000;AC=50;AF=0.893;AN=56;BaseQRankSum=-5.010;DP=421;FS=0.000;HRun=0;HaplotypeScore=128.7024;InbreedingCoeff=0.4111;MQ=79.72;MQ0=0;MQRankSum=-6.443;QD=56.00;ReadPosRankSum=3.309;VQSLOD=4.1499;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:17,0:17:7.08:67,0,7	1/1:6,0:6:12.03:351,12,0	0/0:36,0:27:42.83:0,43,900	0/0:26,0:21:29.73:0,30,492	1/1:10,0:10:0.13:87,0,0	0/1:9,0:9:39.61:110,0,40	1/1:13,0:13:5:72,5,0	1/1:19,0:19:11.80:320,12,0	1/1:13,0:13:33.10:1074,33,0	1/1:13,0:13:36.05:1188,36,0	1/1:16,0:16:32.91:909,33,0	1/1:12,0:12:36.08:1110,36,0	1/1:13,6:27:36.09:1579,36,0	1/1:11,0:11:27.03:847,27,0	1/1:19,0:19:50.48:1736,50,0	1/1:10,0:10:1.12:173,1,0	1/1:20,0:20:48.01:1694,48,0	1/1:3,0:3:6.02:98,6,0	1/1:7,0:7:18:485,18,0	1/1:6,4:17:21.06:790,21,0	1/1:11,0:11:5.99:209,6,0	1/1:18,0:18:50.51:1883,51,0	1/1:15,0:14:29.90:712,30,0	1/1:19,0:19:35.96:1206,36,0	1/1:6,0:6:3.47:26,3,0	1/1:18,1:19:51.15:1850,51,0	1/1:10,7:26:30.09:1385,30,0	1/1:3,0:3:6.02:142,6,0
chr10	9234266	.	C	CCT	4107.70	PASS	AB=0.946;AC=44;AF=0.786;AN=56;BaseQRankSum=0.902;DP=405;FS=7.933;HRun=0;HaplotypeScore=128.6605;InbreedingCoeff=0.2051;MQ=82.74;MQ0=0;MQRankSum=-5.065;QD=12.08;ReadPosRankSum=6.023;VQSLOD=2.6780;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:4,13:17:28.14:29,0,28	0/1:6,0:6:0.31:51,0,0	0/0:38,0:30:27.47:0,27,533	0/0:26,0:21:30.30:0,30,294	0/1:10,0:10:3.59:72,0,4	1/1:10,0:10:17.39:124,17,0	0/1:13,0:13:6.56:98,0,7	0/1:20,0:20:56.16:264,0,56	1/1:14,0:14:34.12:263,34,0	1/1:13,0:13:20.77:182,21,0	1/1:17,0:17:17.07:157,17,0	1/1:12,0:12:14.84:192,15,0	1/1:19,0:19:30.89:255,31,0	0/1:12,0:12:38.27:94,0,38	1/1:19,0:19:18.54:247,19,0	1/1:10,0:10:15.94:117,16,0	1/1:20,0:20:43.16:327,43,0	1/1:3,0:3:5.91:54,6,0	1/1:7,0:7:6.47:80,6,0	1/1:10,0:10:11.66:91,12,0	0/1:12,0:12:11.79:52,0,12	1/1:18,0:18:43.34:350,43,0	1/1:15,0:14:20.46:188,20,0	1/1:19,0:19:1.85:151,2,0	1/1:7,0:7:3.47:26,3,0	1/1:19,0:19:38.31:392,38,0	1/1:16,0:16:29.92:252,30,0	0/1:2,0:2:0.02:0,0,0
chr10	9234267	.	C	CTCCCCCT	13920.71	PASS	AB=0.815;AC=41;AF=0.732;AN=56;BaseQRankSum=0.876;DP=399;FS=1.923;HRun=0;HaplotypeScore=132.6653;InbreedingCoeff=0.0110;MQ=81.19;MQ0=0;MQRankSum=-7.648;QD=41.43;ReadPosRankSum=7.299;VQSLOD=4.4801;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:17,0:17:18.88:57,0,19	1/1:6,0:6:12.03:283,12,0	0/0:38,0:29:53.69:0,54,874	0/0:25,0:20:30.40:0,30,517	0/1:3,0:10:17.36:113,0,17	0/1:9,0:10:21.47:107,0,21	0/1:13,0:13:7.96:29,0,8	0/1:6,0:19:60.90:302,0,61	1/1:7,7:14:36.11:1008,36,0	1/1:11,2:13:14.15:821,14,0	1/1:12,3:16:18.03:679,18,0	1/1:8,4:12:11.33:672,11,0	1/1:8,9:17:30.43:1004,30,0	0/1:11,2:13:18.54:563,0,19	1/1:13,6:19:43.69:1180,44,0	0/1:9,1:10:0.14:176,0,0	1/1:13,7:20:40.64:1195,41,0	0/1:3,0:3:7.87:90,0,8	0/1:5,1:6:2:316,0,2	1/1:5,5:10:18.06:434,18,0	0/1:5,1:12:26.64:149,0,27	1/1:7,10:18:50.49:1301,50,0	1/1:12,3:14:29.81:457,30,0	0/1:7,12:19:49.38:666,0,49	1/1:8,0:8:3.47:26,3,0	1/1:11,7:19:51.15:1302,51,0	1/1:6,9:15:30.10:934,30,0	1/1:2,0:2:0.91:56,1,0
chr10	9234274	.	C	CCCA	7250.24	PASS	AB=1.000;AC=51;AF=0.911;AN=56;BaseQRankSum=2.808;DP=391;FS=4.141;HRun=0;HaplotypeScore=133.4465;InbreedingCoeff=0.6729;MQ=84.87;MQ0=0;MQRankSum=-5.956;QD=21.02;ReadPosRankSum=3.458;VQSLOD=4.9316;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:14:17.82:130,18,0	1/1:5,0:5:5.95:44,6,0	0/0:36,0:30:48.94:0,49,435	0/1:21,0:17:0.64:1,0,115	1/1:13,0:14:17.75:137,18,0	1/1:15,0:17:18.32:139,18,0	1/1:14,0:14:33.60:204,34,0	1/1:11,0:11:22.12:178,22,0	1/1:6,0:13:33.04:465,33,0	1/1:5,2:7:17.96:224,18,0	1/1:10,3:14:24.12:239,24,0	1/1:4,4:9:26.57:337,27,0	1/1:10,9:19:33.04:504,33,0	1/1:12,2:14:29.93:294,30,0	1/1:12,6:18:47.81:597,48,0	1/1:9,0:15:13.85:153,14,0	1/1:10,7:17:32.73:396,33,0	1/1:4,0:4:11.93:90,12,0	1/1:6,1:7:14.96:161,15,0	1/1:9,5:14:21.01:244,21,0	1/1:9,1:10:17.58:151,18,0	1/1:10,10:20:53.82:699,54,0	1/1:9,3:11:20.82:226,21,0	1/1:7,12:19:44.98:542,45,0	0/0:3,0:9:0:0,0,0	1/1:9,7:16:37.96:500,38,0	1/1:10,8:19:38.86:543,39,0	1/1:2,0:2:5.93:54,6,0
chr10	9235325	.	TCACACACACACACA	T	164.72	PASS	AB=0.893;AC=12;AF=0.273;AN=44;BaseQRankSum=5.655;DP=496;FS=0.000;HRun=0;HaplotypeScore=177.6423;InbreedingCoeff=0.3670;MQ=46.43;MQ0=47;MQRankSum=-5.356;QD=1.38;ReadPosRankSum=-5.374;VQSLOD=0.7090;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	0/0:10,0:9:4.22:0,4,355	./.	./.	./.	./.	0/0:28,0:25:3.90:0,4,127	0/0:28,0:27:2.22:0,2,7	0/1:13,0:14:47.85:48,0,303	0/0:20,0:16:18.28:0,18,428	./.	0/0:15,0:15:1.52:0,2,298	0/0:18,0:18:14.51:0,15,463	0/0:26,0:25:12.74:0,13,617	1/1:19,0:18:13.46:37,13,0	1/1:13,0:10:3.01:99,3,0	0/0:24,0:23:22.62:0,23,1121	1/1:13,0:10:3.01:87,3,0	0/0:7,0:6:3.01:0,3,148	0/0:14,0:12:9.03:0,9,292	0/0:16,0:12:18.06:0,18,496	1/1:21,0:20:2.22:7,2,0	1/1:14,0:13:0.47:1,0,0	0/0:27,0:22:14.07:0,14,743	0/1:19,3:21:9.04:9,0,32	0/0:10,0:9:11.26:0,11,271	0/0:21,0:21:15.92:0,16,751	0/0:6,0:2:3.01:0,3,94
chr10	9237720	.	A	AT	7313.86	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-14.359;DP=588;FS=1.068;HRun=0;HaplotypeScore=53.1441;InbreedingCoeff=0.9929;MQ=73.79;MQ0=0;MQRankSum=0.354;QD=37.32;ReadPosRankSum=-0.469;VQSLOD=4.3228;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,27:28:60.20:888,60,0	0/0:8,0:8:24.08:0,24,335	0/0:16,0:16:38.02:0,38,504	0/0:10,0:9:13.26:0,13,208	1/1:1,23:24:56.54:811,57,0	1/1:0,26:26:66.22:987,66,0	1/1:0,22:22:51.17:764,51,0	1/1:1,34:35:99:1399,102,0	0/0:23,0:23:69.23:0,69,964	0/0:24,0:24:72.23:0,72,984	0/0:26,0:26:78.26:0,78,1085	0/0:23,0:23:69.23:0,69,957	0/0:28,0:28:84.25:0,84,1101	0/0:11,0:11:30.08:0,30,387	0/0:17,0:17:51.16:0,51,698	1/1:0,21:21:57.19:853,57,0	0/0:17,0:17:48.14:0,48,633	1/1:0,19:19:51.17:758,51,0	0/0:32,0:32:90.25:0,90,1158	0/0:29,0:29:87.24:0,87,1146	0/0:23,0:23:69.20:0,69,922	0/0:13,0:13:33.11:0,33,457	0/0:12,0:12:33.11:0,33,459	0/0:20,0:20:60.19:0,60,816	1/1:0,21:21:57.19:853,57,0	0/0:25,0:25:67.40:0,67,961	0/0:30,0:30:80.52:0,81,1172	0/0:5,0:5:15.05:0,15,209
chr10	9238017	.	CCTCTCTCTCTCTCT	C	2580.13	PASS	AB=0.794;AC=21;AF=0.389;AN=54;BaseQRankSum=7.763;DP=651;FS=25.935;HRun=0;HaplotypeScore=241.6946;InbreedingCoeff=0.2420;MQ=60.92;MQ0=17;MQRankSum=-4.736;QD=8.81;ReadPosRankSum=0.298;VQSLOD=1.2573;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:31:18.53:0,19,505	1/1:4,0:6:6.02:106,6,0	./.	0/0:43,0:18:6.02:0,6,78	0/0:27,0:31:20.34:0,20,383	0/0:24,0:28:21.07:0,21,623	0/0:22,0:29:21.05:0,21,562	0/0:34,0:34:46.71:0,47,1172	0/0:19,0:23:36.59:0,37,1462	1/1:14,11:25:27.07:813,27,0	1/1:11,9:21:11.22:266,11,0	0/1:15,1:25:99:200,0,114	0/1:16,0:26:60.52:78,0,61	0/1:14,0:14:9.32:71,0,9	1/1:12,6:19:12.04:450,12,0	0/0:31,0:37:21.80:0,22,810	0/1:17,0:17:73.20:73,0,85	0/0:11,0:10:9.03:0,9,302	0/0:10,0:10:9.03:0,9,126	0/1:11,2:20:99:249,0,115	0/0:19,0:23:15.52:0,16,366	0/1:13,0:21:18.96:19,0,336	1/1:7,4:12:6:93,6,0	1/1:16,11:27:2.50:103,3,0	0/0:21,0:23:18.06:0,18,451	0/1:17,0:25:99:176,0,371	0/1:9,0:18:5.67:6,0,190	0/1:11,0:11:2.38:52,0,2
chr10	9239029	.	TG	T	12087.26	PASS	AB=0.994;AC=42;AF=0.750;AN=56;BaseQRankSum=-12.432;DP=582;FS=2.852;HRun=2;HaplotypeScore=80.3809;InbreedingCoeff=0.4629;MQ=79.59;MQ0=0;MQRankSum=-2.750;QD=23.94;ReadPosRankSum=2.248;VQSLOD=4.7412;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:34,0:34:46.35:46,0,127	1/1:1,6:7:17.80:186,18,0	0/0:22,0:22:63.07:0,63,812	0/0:15,0:15:35.02:0,35,447	0/0:26,0:26:9.05:0,9,128	0/0:14,0:14:32.57:0,33,119	0/1:17,0:17:17.69:18,0,67	0/1:28,1:29:58.41:98,0,58	1/1:26,0:26:61.25:268,61,0	1/1:0,29:29:87.22:1066,87,0	1/1:0,22:22:60.19:766,60,0	1/1:0,14:14:42.14:541,42,0	1/1:1,26:27:58.23:803,58,0	1/1:0,12:12:30.10:388,30,0	1/1:0,19:19:48.16:621,48,0	0/1:19,0:19:1.96:2,0,68	1/1:0,22:22:57.18:735,57,0	0/1:11,0:11:28.45:48,0,28	1/1:1,25:26:75.19:907,75,0	1/1:1,30:31:73.97:946,74,0	1/1:15,0:15:39.28:188,39,0	1/1:0,23:23:63.20:814,63,0	1/1:3,23:26:78.23:972,78,0	1/1:1,14:15:36.12:465,36,0	0/1:20,0:20:38.06:38,0,70	1/1:0,26:26:78.25:1008,78,0	1/1:0,20:20:45.15:581,45,0	1/1:0,15:15:45.15:581,45,0
chr10	9239030	.	G	GT	1059.11	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=-7.861;DP=584;FS=2.560;HRun=1;HaplotypeScore=120.1646;InbreedingCoeff=0.6446;MQ=80.85;MQ0=0;MQRankSum=-0.659;QD=15.13;ReadPosRankSum=-2.838;VQSLOD=2.6893;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:83.69:0,84,450	0/0:7,0:7:9.10:0,9,30	0/0:24,0:24:62.85:0,63,800	0/0:15,0:15:41.64:0,42,458	0/0:24,2:26:7.35:0,7,303	0/0:14,0:14:40.82:0,41,238	0/0:16,1:17:9.89:0,10,185	0/0:29,0:29:44.62:0,45,271	1/1:1,25:26:69.16:724,69,0	0/1:29,0:29:25.88:26,0,36	0/0:22,0:22:26.42:0,26,72	0/0:14,0:14:17.75:0,18,45	0/0:27,0:27:29:0,29,84	0/0:12,0:12:12.46:0,12,32	0/0:19,0:19:19.94:0,20,50	0/0:17,1:18:14.81:0,15,201	0/0:23,0:23:23.98:0,24,61	0/0:10,0:11:17.87:0,18,96	0/0:25,0:25:12.75:0,13,45	0/0:32,0:32:31.58:0,32,80	1/1:0,14:15:42.07:438,42,0	0/0:23,0:23:26.47:0,26,68	0/0:26,0:26:9.97:0,10,51	0/0:14,0:14:14.95:0,15,38	0/0:21,0:21:46.27:0,46,247	0/0:26,0:26:19.12:0,19,63	0/0:20,0:20:6.68:0,7,30	0/0:15,0:15:18.69:0,19,48
chr10	9240480	.	GA	G	2092.42	PASS	AB=0.757;AC=36;AF=0.643;AN=56;BaseQRankSum=0.524;DP=499;FS=0.000;HRun=14;HaplotypeScore=70.0332;InbreedingCoeff=0.5173;MQ=61.01;MQ0=8;MQRankSum=1.843;QD=6.42;ReadPosRankSum=5.567;VQSLOD=2.3596;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:53:56.57:0,57,382	1/1:0,6:6:11.90:82,12,0	0/1:12,0:7:3.40:27,0,3	0/1:8,2:9:28.44:30,0,28	0/0:12,0:24:41.24:0,41,230	0/1:10,4:14:43.32:43,0,204	0/0:20,1:22:20.37:0,20,338	0/0:8,1:20:10.42:0,10,162	1/1:4,0:21:22.38:65,22,0	1/1:11,5:17:13.65:82,14,0	1/1:3,9:15:13.79:88,14,0	0/1:6,14:21:23.95:137,0,24	1/1:6,15:21:28.64:185,29,0	1/1:9,10:19:17.73:123,18,0	1/1:3,17:22:32.88:203,33,0	0/0:7,1:20:20.09:0,20,209	1/1:5,14:19:31.24:210,31,0	0/0:4,0:16:20.02:0,20,107	0/1:9,8:16:9.89:84,0,10	0/1:6,6:12:7.06:102,0,7	1/1:9,6:17:24.33:153,24,0	1/1:7,3:10:5.90:41,6,0	1/1:8,6:13:11.55:81,12,0	1/1:1,11:12:26.76:185,27,0	0/0:15,0:15:29.06:0,29,233	1/1:2,6:9:16.36:96,16,0	1/1:11,14:25:34.68:232,35,0	1/1:3,2:5:5.93:41,6,0
chr10	9241041	.	T	TTCTCTCTC	2067.26	PASS	AB=0.991;AC=19;AF=0.352;AN=54;BaseQRankSum=-0.440;DP=472;FS=45.231;HRun=0;HaplotypeScore=147.9499;InbreedingCoeff=0.4802;MQ=65.12;MQ0=6;MQRankSum=-4.594;QD=8.65;ReadPosRankSum=-3.868;VQSLOD=-0.5850;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:9,0:8:3.01:46,3,0	0/0:4,0:4:9.03:0,9,226	0/1:23,0:14:5.98:6,0,35	0/1:24,0:15:23.96:24,0,138	0/1:21,1:22:0.01:0,0,0	1/1:25,0:30:6.83:602,7,0	./.	1/1:49,0:46:39.88:645,40,0	1/1:8,7:15:6.02:246,6,0	0/0:19,0:19:21.04:0,21,416	0/0:17,0:17:21.07:0,21,495	0/0:14,0:15:24.08:0,24,549	0/0:8,0:10:15.05:0,15,269	0/0:10,0:10:18.06:0,18,446	0/0:16,0:16:30.09:0,30,672	1/1:9,0:9:6.02:200,6,0	0/1:18,0:19:18.40:18,0,683	1/1:12,0:11:12.03:244,12,0	0/0:19,0:18:9.03:0,9,226	0/0:20,0:19:36.12:0,36,846	0/1:12,0:12:26.82:135,0,27	0/0:8,0:8:9.02:0,9,176	0/0:13,0:13:9.03:0,9,216	0/0:7,0:7:3.01:0,3,66	1/1:14,0:15:2.71:72,3,0	0/0:21,0:21:21.07:0,21,457	0/0:29,0:29:48.05:0,48,901	0/0:13,0:11:17.96:0,18,217
chr10	9241073	.	CTGTG	C	902.32	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=1.824;DP=476;FS=6.833;HRun=0;HaplotypeScore=121.2477;InbreedingCoeff=0.6389;MQ=48.93;MQ0=22;MQRankSum=6.321;QD=8.13;ReadPosRankSum=0.533;VQSLOD=2.2852;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,0:8:1.55:4,2,0	0/0:6,0:5:11.91:0,12,188	0/0:23,0:9:14.91:0,15,191	0/0:40,0:13:16.29:0,16,245	0/0:23,0:23:2.22:0,2,8	0/0:26,0:26:29.86:0,30,347	0/0:12,0:11:5.88:0,6,36	0/0:40,0:32:43.50:0,43,391	0/0:14,0:14:5.21:0,5,91	1/1:6,12:18:25.56:568,26,0	1/1:8,9:16:12.02:130,12,0	0/0:9,0:10:21.69:0,22,402	0/0:15,0:15:29.36:0,29,513	0/1:16,0:16:18.73:19,0,409	1/1:7,12:19:9.03:149,9,0	0/0:9,0:9:8.89:0,9,72	0/0:21,0:21:33.09:0,33,533	0/0:10,0:9:3.01:0,3,41	0/0:14,0:13:30.06:0,30,520	0/0:22,0:21:47.78:0,48,906	0/0:11,0:11:14.74:0,15,279	0/0:11,0:10:14.84:0,15,232	1/1:7,18:25:2.39:49,2,0	1/1:6,1:7:9.03:142,9,0	0/0:7,0:7:3.07:0,3,11	0/0:14,0:13:30.09:0,30,499	0/0:25,0:29:44.66:0,45,658	0/0:7,0:6:15.04:0,15,287
chr10	9241077	.	G	GTA	902.47	PASS	AB=0.896;AC=11;AF=0.196;AN=56;BaseQRankSum=3.624;DP=462;FS=1.434;HRun=0;HaplotypeScore=109.6512;InbreedingCoeff=0.6209;MQ=50.83;MQ0=22;MQRankSum=-6.481;QD=8.51;ReadPosRankSum=-0.167;VQSLOD=3.5122;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:6,2:7:0:0,0,0	0/0:6,0:5:15.02:0,15,181	0/0:29,0:9:15.04:0,15,190	0/0:42,0:15:29.33:0,29,263	1/1:13,4:17:3:25,3,0	1/1:20,7:26:24.99:357,25,0	1/1:10,1:10:8.96:89,9,0	0/1:28,0:23:9.67:438,0,10	0/0:14,0:14:26.23:0,26,237	0/0:19,0:19:50.67:0,51,377	0/0:19,0:18:32.65:0,33,234	0/0:9,0:9:27.02:0,27,314	0/0:14,0:14:36.12:0,36,501	0/0:17,0:17:35.61:0,36,427	0/0:20,0:20:26.87:0,27,204	0/1:7,1:8:8.93:63,0,9	0/0:20,0:20:48.02:0,48,529	1/1:6,1:6:5.98:77,6,0	0/0:15,0:14:42.06:0,42,481	0/0:24,0:24:66.08:0,66,777	0/0:10,0:10:14.63:0,15,171	0/0:9,0:8:21.05:0,21,270	0/0:25,0:25:8.29:0,8,68	0/0:7,0:7:6.83:0,7,43	0/1:6,2:8:0:0,0,0	0/0:15,0:14:39.09:0,39,486	0/0:27,0:27:68.68:0,69,743	0/0:7,0:6:12.96:0,13,189
chr10	9241104	.	TGTCTCTCC	T	4981.02	PASS	AB=0.550;AC=15;AF=0.268;AN=56;BaseQRankSum=9.416;DP=458;FS=1.735;HRun=0;HaplotypeScore=129.1721;InbreedingCoeff=0.8576;MQ=60.92;MQ0=5;MQRankSum=-10.942;QD=45.28;ReadPosRankSum=-6.898;VQSLOD=2.9438;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,2:3:6.02:145,6,0	0/0:7,0:7:21.07:0,21,900	0/0:42,0:16:38.73:0,39,991	0/0:43,0:18:26.75:0,27,936	1/1:2,21:24:60.16:1205,60,0	1/1:7,14:20:33.54:763,34,0	1/1:3,11:13:27.09:663,27,0	1/1:5,16:20:42.13:961,42,0	0/0:14,0:14:39.13:0,39,1636	0/0:15,0:15:42.12:0,42,1621	0/0:16,0:16:42.14:0,42,1612	0/0:11,0:11:27.09:0,27,1081	0/0:19,0:19:51.17:0,51,2097	0/0:11,0:11:30.10:0,30,1186	0/0:18,0:18:24.08:0,24,981	0/1:2,9:11:99:507,0,105	0/0:18,0:18:39.13:0,39,1500	1/1:0,3:3:6.02:160,6,0	0/0:15,0:14:33.11:0,33,1369	0/0:20,0:20:54.19:0,54,2305	0/0:6,0:6:15.05:0,15,647	0/0:11,0:11:33.11:0,33,1405	0/0:26,0:26:21.25:0,21,906	0/0:9,0:9:21.07:0,21,847	1/1:2,10:12:24.08:576,24,0	0/0:19,0:19:57.19:0,57,2197	0/0:22,0:22:56.73:0,57,2274	0/0:4,0:4:10.85:0,11,382
chr10	9241111	.	CCG	C	256.44	PASS	AB=0.950;AC=14;AF=0.250;AN=56;BaseQRankSum=12.175;DP=441;FS=3.244;HRun=0;HaplotypeScore=104.7889;InbreedingCoeff=0.5212;MQ=64.88;MQ0=2;MQRankSum=-11.253;QD=2.42;ReadPosRankSum=-7.320;VQSLOD=-0.6262;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:3,0:3:4.26:13,4,0	0/0:7,0:7:21.07:0,21,426	0/0:30,2:15:16.04:0,16,690	0/0:36,0:17:12.29:0,12,524	1/1:24,0:24:30.24:92,30,0	0/1:19,0:19:8.43:50,0,8	1/1:12,0:12:2.90:47,3,0	0/1:18,0:17:20.76:88,0,21	0/0:17,0:17:48.16:0,48,926	0/0:16,0:16:48.16:0,48,928	0/0:19,0:19:51.17:0,51,1005	0/0:12,0:12:36.10:0,36,642	0/0:18,0:18:54.18:0,54,1049	0/0:10,1:11:30.10:0,30,589	0/0:17,0:17:27.09:0,27,525	0/1:11,0:11:41.24:44,0,41	0/0:16,0:16:42.14:0,42,798	1/1:3,0:3:5.48:23,5,0	0/0:11,0:11:33.11:0,33,670	0/0:20,0:20:60.21:0,60,1216	0/0:8,0:8:15.05:0,15,304	0/0:13,0:13:39.12:0,39,715	0/0:26,0:26:26.41:0,26,490	0/0:10,0:10:24.08:0,24,485	1/1:12,0:12:16.48:49,16,0	0/0:24,0:24:72.25:0,72,1374	0/0:21,0:21:12.94:0,13,909	0/1:3,1:4:18.42:18,0,141
chr10	9242587	.	G	GA	16614.90	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-6.934;DP=634;FS=7.116;HRun=8;HaplotypeScore=56.6075;InbreedingCoeff=0.9689;MQ=76.37;MQ0=1;MQRankSum=-7.146;QD=27.51;ReadPosRankSum=3.720;VQSLOD=5.3805;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,29:32:78.23:900,78,0	1/1:1,10:11:27.08:311,27,0	0/0:17,0:16:35.31:0,35,287	0/0:13,0:12:11.91:0,12,154	1/1:3,26:29:72.21:831,72,0	1/1:2,18:21:50.98:568,51,0	1/1:3,17:20:45.13:519,45,0	1/1:12,22:34:42.72:693,43,0	1/1:1,21:22:60.18:692,60,0	1/1:7,27:34:78.23:900,78,0	1/1:4,21:25:57.13:643,57,0	1/1:2,22:24:63.19:727,63,0	1/1:1,19:20:57.17:654,57,0	1/1:1,16:17:45.13:519,45,0	1/1:1,16:17:42.12:485,42,0	1/1:2,17:19:48.14:554,48,0	1/1:5,25:30:14.27:672,14,0	1/1:0,11:11:30.09:346,30,0	1/1:2,19:21:57.17:658,57,0	1/1:3,27:30:84.24:959,84,0	1/1:1,19:20:54.16:623,54,0	1/1:9,14:23:42.12:483,42,0	1/1:2,26:28:69.20:793,69,0	1/1:2,20:22:57.17:658,57,0	1/1:7,19:26:54.16:623,54,0	1/1:9,22:32:69.01:764,69,0	1/1:2,25:27:72.21:831,72,0	1/1:0,9:9:18.05:208,18,0
chr10	9245003	.	CTTTTT	C	11395.88	PASS	AB=0.690;AC=51;AF=0.911;AN=56;BaseQRankSum=-2.437;DP=557;FS=5.642;HRun=16;HaplotypeScore=151.6806;InbreedingCoeff=0.6550;MQ=50.53;MQ0=2;MQRankSum=-4.105;QD=21.34;ReadPosRankSum=4.436;VQSLOD=2.0262;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,0:24:29.20:349,29,0	1/1:4,5:11:14.82:199,15,0	0/0:15,0:8:11.97:0,12,177	0/0:7,0:6:8.99:0,9,115	1/1:6,0:26:30.69:343,31,0	1/1:6,0:18:38.84:381,39,0	1/1:4,0:18:32.96:319,33,0	1/1:19,0:31:20.73:252,21,0	1/1:6,0:23:47.64:453,48,0	1/1:9,13:22:41.74:601,42,0	1/1:5,11:17:32.17:387,32,0	1/1:5,15:21:41.99:627,42,0	1/1:4,12:17:32.38:476,32,0	1/1:3,12:16:35.58:523,36,0	1/1:3,18:22:39.06:581,39,0	1/1:1,0:15:32.82:321,33,0	1/1:5,9:14:23.61:373,24,0	1/1:4,0:5:2.89:29,3,0	0/1:16,13:28:1.26:439,0,1	1/1:4,19:26:56.14:728,56,0	1/1:5,0:12:5.86:56,6,0	1/1:5,15:20:29.85:467,30,0	1/1:3,20:24:46.08:668,46,0	1/1:9,13:22:8.71:140,9,0	1/1:2,0:18:45.01:441,45,0	1/1:8,23:31:65.72:957,66,0	1/1:7,35:47:83.39:1193,83,0	1/1:2,3:5:5.95:93,6,0
chr10	9245722	.	TG	T	3501.13	PASS	AB=0.899;AC=18;AF=0.321;AN=56;BaseQRankSum=10.479;DP=832;FS=8.707;HRun=2;HaplotypeScore=165.1212;InbreedingCoeff=0.6810;MQ=53.11;MQ0=54;MQRankSum=3.748;QD=12.46;ReadPosRankSum=-3.170;VQSLOD=0.9468;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:22,10:30:58.25:656,58,0	0/1:10,0:10:9.25:9,0,154	0/0:35,1:11:24.07:0,24,290	0/0:62,1:22:18.97:0,19,375	1/1:16,6:21:35.19:352,35,0	1/1:24,5:26:38.70:410,39,0	1/1:24,5:26:13.08:404,13,0	0/1:20,16:30:99:508,0,172	1/1:23,7:27:46.46:298,46,0	0/0:42,0:40:17.07:0,17,777	0/0:23,0:23:30.10:0,30,393	0/0:39,0:39:24.09:0,24,616	0/0:28,0:27:39.13:0,39,521	0/0:27,1:27:8.84:0,9,499	0/1:36,0:35:99:193,0,542	1/1:14,8:19:30.07:337,30,0	0/0:38,0:34:28.48:0,28,647	0/1:17,2:18:5.31:165,0,5	0/0:19,0:16:16.94:0,17,487	0/0:28,0:25:40.52:0,41,466	0/0:47,0:41:67.69:0,68,1171	0/0:34,0:32:48.14:0,48,642	0/0:26,0:24:17.85:0,18,209	0/0:35,0:33:49.13:0,49,625	1/1:14,2:14:17.96:168,18,0	0/0:27,0:26:70.40:0,70,883	0/0:21,0:20:41.97:0,42,525	0/0:17,0:13:35.98:0,36,456
chr10	9245723	.	G	GTATC	1625.45	PASS	AB=0.947;AC=10;AF=0.179;AN=56;BaseQRankSum=8.570;DP=853;FS=2.469;HRun=0;HaplotypeScore=216.5753;InbreedingCoeff=0.0233;MQ=52.87;MQ0=59;MQRankSum=1.595;QD=6.72;ReadPosRankSum=0.060;VQSLOD=2.9446;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:31,0:30:46.12:414,46,0	0/0:10,0:10:13.28:0,13,295	0/0:33,0:10:24.08:0,24,426	0/0:58,1:21:41.67:0,42,582	0/1:21,0:23:82.53:134,0,83	0/1:27,0:25:86.30:186,0,86	0/1:29,0:26:29.70:267,0,30	0/1:36,0:30:99:305,0,261	0/1:34,0:30:35.61:36,0,199	0/0:41,0:39:71.22:0,71,1316	0/0:23,0:23:30.10:0,30,598	0/0:41,0:39:52.92:0,53,1021	0/0:29,0:27:39.13:0,39,813	0/0:29,0:28:50.60:0,51,872	0/0:39,0:38:31.38:0,31,892	0/1:19,0:20:73.45:169,0,73	0/0:37,0:34:56.65:0,57,1062	0/1:16,0:19:74.18:169,0,74	0/0:20,0:17:43.33:0,43,770	0/0:28,0:25:41.97:0,42,710	0/0:53,0:47:88.59:0,89,1883	0/0:34,0:32:48.16:0,48,996	0/0:27,0:25:18.05:0,18,343	0/0:34,0:31:49.38:0,49,950	0/1:16,0:14:55.74:97,0,56	0/0:31,0:29:75.02:0,75,1466	0/0:23,0:21:41.92:0,42,800	0/0:17,0:13:31.51:0,32,687
chr10	9245725	.	T	TG	1648.20	PASS	AB=0.987;AC=12;AF=0.214;AN=56;BaseQRankSum=6.992;DP=850;FS=5.050;HRun=2;HaplotypeScore=178.8486;InbreedingCoeff=0.1797;MQ=51.68;MQ0=66;MQRankSum=3.717;QD=5.53;ReadPosRankSum=1.563;VQSLOD=0.7406;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:33,0:31:48.52:440,49,0	0/0:9,0:9:17.76:0,18,185	0/0:31,0:9:18.05:0,18,215	0/1:55,0:17:24.74:25,0,361	0/1:25,0:24:17.70:140,0,18	0/1:29,0:25:44.32:169,0,44	0/1:29,0:26:12.60:263,0,13	0/1:35,0:29:99:180,0,257	0/1:31,0:27:29.17:67,0,29	0/0:41,0:38:87.87:0,88,927	0/0:22,0:22:26.98:0,27,340	0/0:45,0:40:61.55:0,62,673	0/0:30,0:27:39.12:0,39,486	0/0:28,0:27:48.36:0,48,554	0/0:36,0:34:77.29:0,77,712	1/1:19,4:20:15.48:245,15,0	0/0:38,0:35:57.05:0,57,669	0/1:19,2:20:7.71:198,0,8	0/0:20,0:17:37.28:0,37,421	0/0:29,0:26:32.86:0,33,396	0/0:56,0:50:99:0,103,1160	0/0:33,0:31:44.89:0,45,568	0/0:27,0:25:13.58:0,14,234	0/0:35,0:32:45.91:0,46,569	0/1:16,0:13:16.62:85,0,17	0/0:33,0:29:76.97:0,77,907	0/0:22,0:20:39.07:0,39,455	0/0:17,0:13:35.14:0,35,423
chr10	9245726	.	GT	G	1666.90	PASS	AB=0.967;AC=14;AF=0.250;AN=56;BaseQRankSum=7.227;DP=849;FS=4.263;HRun=1;HaplotypeScore=171.4581;InbreedingCoeff=0.4488;MQ=50.14;MQ0=69;MQRankSum=3.531;QD=5.61;ReadPosRankSum=0.698;VQSLOD=0.4856;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:34,0:32:53.79:465,54,0	0/0:9,0:9:17.25:0,17,181	0/0:29,0:8:18.05:0,18,215	0/1:54,0:15:5.01:5,0,364	1/1:23,2:24:29:247,29,0	1/1:28,1:25:18.68:246,19,0	0/1:28,1:26:10.45:300,0,10	0/1:34,0:28:99:178,0,272	0/1:24,6:26:53.95:72,0,54	0/0:42,0:38:86.74:0,87,984	0/0:21,0:21:27.09:0,27,340	0/0:47,0:42:61.12:0,61,728	0/0:30,0:27:39.12:0,39,486	0/0:28,0:27:47.47:0,47,562	0/0:36,0:34:75.66:0,76,839	0/1:24,0:21:47.35:141,0,47	0/0:39,0:36:56.37:0,56,673	0/1:21,0:20:55.73:56,0,80	0/0:18,0:15:37.36:0,37,454	0/0:30,0:26:32.96:0,33,412	0/0:54,0:48:99:0,105,1335	0/0:34,0:30:44.89:0,45,568	0/0:28,0:26:23.08:0,23,272	0/0:35,0:32:45.79:0,46,569	1/1:16,1:14:18.59:136,19,0	0/0:33,0:28:78.20:0,78,945	0/0:22,0:20:38.47:0,38,462	0/0:17,0:13:35.14:0,35,423
chr10	9245727	.	TG	T	371.72	PASS	AB=0.981;AC=10;AF=0.179;AN=56;BaseQRankSum=7.439;DP=843;FS=5.902;HRun=1;HaplotypeScore=174.0963;InbreedingCoeff=0.4686;MQ=49.32;MQ0=72;MQRankSum=3.581;QD=1.98;ReadPosRankSum=1.150;VQSLOD=-0.7496;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:33,1:32:40.24:188,40,0	0/0:9,0:9:17.08:0,17,187	0/0:26,1:7:15.05:0,15,189	0/0:51,0:14:15.55:0,16,380	0/1:22,1:23:4.40:47,0,4	1/1:29,0:25:7.19:75,7,0	0/1:27,1:25:25.27:105,0,25	0/1:32,0:26:53.70:54,0,317	0/0:28,0:24:27.62:0,28,253	0/0:42,0:38:83.40:0,83,995	0/0:21,0:21:27.09:0,27,342	0/0:47,0:41:58.80:0,59,738	0/0:31,0:27:39.12:0,39,495	0/0:28,0:27:47.50:0,48,568	0/0:36,0:34:72.40:0,72,854	0/1:24,0:21:19.95:20,0,107	0/0:39,0:36:59.01:0,59,699	0/0:21,0:20:5.50:0,5,168	0/0:19,0:16:41.87:0,42,488	0/0:29,0:25:30.09:0,30,389	0/0:52,0:46:99:0,105,1384	0/0:36,0:30:44.80:0,45,571	0/0:28,0:26:22.98:0,23,279	0/0:37,0:33:34.48:0,34,555	1/1:17,0:14:5.14:34,5,0	0/0:34,0:28:81.20:0,81,997	0/0:23,0:21:38:0,38,473	0/0:17,0:13:36.05:0,36,433
chr10	9245728	.	GT	G	1940	PASS	AB=0.873;AC=11;AF=0.196;AN=56;BaseQRankSum=5.070;DP=851;FS=7.836;HRun=1;HaplotypeScore=167.8350;InbreedingCoeff=0.2091;MQ=49.38;MQ0=73;MQRankSum=2.674;QD=8.26;ReadPosRankSum=0.241;VQSLOD=0.4913;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:25,8:31:22.16:605,22,0	0/0:9,0:9:16.86:0,17,186	0/0:26,0:7:15.05:0,15,191	0/0:50,0:14:20.80:0,21,389	1/1:21,2:23:12.38:214,12,0	0/1:24,4:25:19.99:291,0,20	0/1:25,3:25:13.38:368,0,13	0/1:20,11:25:99:278,0,256	0/1:27,1:24:16.77:17,0,148	0/0:42,0:38:82.88:0,83,997	0/0:24,0:24:27.09:0,27,342	0/0:48,0:42:57.71:0,58,728	0/0:32,0:28:39.12:0,39,495	0/0:29,0:27:47.22:0,47,569	0/0:37,0:34:71.72:0,72,861	0/1:16,8:21:99:163,0,104	0/0:40,0:37:56.12:0,56,669	0/1:19,1:19:76.50:76,0,135	0/0:19,0:16:41.69:0,42,471	0/0:30,0:25:29.96:0,30,387	0/0:53,0:47:99:0,105,1406	0/0:36,0:30:44.89:0,45,572	0/0:28,0:26:23.08:0,23,283	0/0:37,0:33:44.88:0,45,571	0/1:17,1:15:15.17:87,0,15	0/0:34,0:28:81:0,81,1017	0/0:24,0:22:39.96:0,40,477	0/0:17,0:13:32.47:0,32,418
chr10	9245758	.	GTGTGTGTGTGTGTGTA	G	3766.47	PASS	AB=0.976;AC=21;AF=0.375;AN=56;BaseQRankSum=4.698;DP=711;FS=16.778;HRun=0;HaplotypeScore=239.5489;InbreedingCoeff=0.0604;MQ=51.24;MQ0=62;MQRankSum=0.004;QD=8.50;ReadPosRankSum=4.617;VQSLOD=0.9632;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:66.53:0,67,982	1/1:9,0:9:9.03:189,9,0	0/0:19,0:4:12.01:0,12,125	0/0:27,0:16:30.91:0,31,423	0/0:21,0:21:36.09:0,36,998	0/0:29,0:25:53.62:0,54,1148	0/0:34,0:31:63.62:0,64,1092	0/0:21,0:19:55.18:0,55,686	1/1:20,0:16:22.87:460,23,0	0/1:40,0:37:99:453,0,192	0/0:21,0:21:8.93:0,9,64	1/1:40,1:34:1.78:487,2,0	1/1:5,27:28:2.94:18,3,0	0/1:21,0:20:12.45:145,0,12	0/1:33,0:30:99:449,0,139	0/0:20,0:18:36.11:0,36,1318	0/1:31,0:28:55.81:127,0,56	0/0:21,0:20:45.22:0,45,1313	0/1:9,0:9:60.59:127,0,61	0/1:29,0:23:99:158,0,129	0/1:48,0:43:13.82:565,0,14	0/1:18,10:21:34.07:34,0,108	0/1:26,0:24:9.33:9,0,89	0/1:29,0:25:6.35:6,0,95	0/0:19,0:18:33.53:0,34,709	0/1:28,0:23:45.38:344,0,45	1/1:19,0:16:6.59:193,7,0	0/0:5,0:2:3.01:0,3,81
chr10	9245760	.	GTGTGTGTGTGTGTA	G	5837.89	PASS	AB=0.862;AC=28;AF=0.500;AN=56;BaseQRankSum=2.658;DP=684;FS=5.743;HRun=0;HaplotypeScore=207.2894;InbreedingCoeff=0.4744;MQ=51.17;MQ0=61;MQRankSum=0.527;QD=13.36;ReadPosRankSum=3.307;VQSLOD=3.4014;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:66.52:0,67,898	1/1:0,8:8:9.03:325,9,0	0/0:20,0:4:12.01:0,12,125	0/0:29,0:16:24.48:0,24,373	0/0:20,0:20:36.09:0,36,851	0/0:29,0:25:53.58:0,54,921	0/0:32,0:29:61.85:0,62,938	0/0:23,0:21:60.01:0,60,608	1/1:19,0:16:29.12:502,29,0	0/1:37,0:34:7.49:795,0,7	0/1:20,0:20:11.26:19,0,11	1/1:14,23:30:23.64:509,24,0	1/1:31,0:27:2.94:18,3,0	1/1:4,15:18:5.02:215,5,0	0/1:34,0:31:31.78:893,0,32	0/0:19,0:17:36.11:0,36,1156	0/1:8,22:27:17.31:218,0,17	0/0:21,0:20:45.16:0,45,1244	1/1:2,7:9:6.02:273,6,0	0/1:9,19:22:99:204,0,105	1/1:43,0:38:28.05:729,28,0	1/1:23,4:20:12.34:126,12,0	0/1:26,0:24:45.15:58,0,45	1/1:28,0:24:6.33:90,6,0	0/0:19,0:18:33.53:0,34,630	1/1:24,0:19:13.61:592,14,0	1/1:5,12:14:14.86:273,15,0	0/0:4,0:2:3.01:0,3,50
chr10	9245762	.	GTGTGTGTGTGTA	G	5240.87	PASS	AB=0.891;AC=30;AF=0.536;AN=56;BaseQRankSum=3.741;DP=667;FS=4.220;HRun=0;HaplotypeScore=190.9082;InbreedingCoeff=0.5799;MQ=51.49;MQ0=60;MQRankSum=0.786;QD=12.54;ReadPosRankSum=3.384;VQSLOD=3.6045;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:70.31:0,70,804	1/1:8,0:8:9.03:225,9,0	0/0:22,0:6:11.18:0,11,150	0/0:29,0:16:24.39:0,24,373	0/0:20,0:20:36.07:0,36,725	0/0:30,0:26:52.32:0,52,722	0/0:29,0:27:60.01:0,60,847	0/0:24,0:22:56.67:0,57,570	1/1:13,6:16:7.21:260,7,0	1/1:5,29:31:74.57:1064,75,0	1/1:1,16:17:3.40:18,3,0	1/1:34,0:27:16.11:303,16,0	1/1:31,0:27:2.94:18,3,0	0/1:19,0:18:6.13:142,0,6	1/1:26,7:30:68.88:1482,69,0	0/0:20,0:18:39.11:0,39,1014	0/1:29,0:26:31.31:154,0,31	0/0:20,0:19:44.20:0,44,1096	1/1:9,0:9:9.27:162,9,0	0/1:28,0:22:76.96:108,0,77	1/1:44,0:39:43.95:563,44,0	1/1:24,0:17:3.20:60,3,0	0/1:6,20:24:11.77:48,0,12	1/1:7,17:20:3.37:36,3,0	0/0:18,0:17:33.53:0,34,545	1/1:22,0:17:19.20:376,19,0	1/1:17,0:14:14.87:222,15,0	0/0:4,0:2:2.94:0,3,18
chr10	9246847	.	TGAGAG	T	8090.07	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=13.944;DP=809;FS=1.126;HRun=0;HaplotypeScore=167.2083;InbreedingCoeff=0.9822;MQ=86.61;MQ0=1;MQRankSum=-7.142;QD=37.11;ReadPosRankSum=0.969;VQSLOD=5.0081;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,42:50:90.20:1774,90,0	0/0:16,0:16:39.13:0,39,1124	0/0:43,0:39:65.34:0,65,1856	0/0:54,0:46:95.88:0,96,2062	1/1:4,17:21:24.05:436,24,0	1/1:2,21:23:43.49:1084,43,0	1/1:3,26:29:36.12:709,36,0	1/1:5,18:23:54.15:937,54,0	0/0:34,0:34:87.30:0,87,2505	0/0:38,0:38:99:0,99,2811	0/0:21,0:21:51.16:0,51,1422	0/0:31,0:31:93.32:0,93,2630	0/0:31,0:31:81.28:0,81,2297	0/0:22,0:22:57.20:0,57,1620	0/0:36,0:35:93.28:0,93,2510	1/1:2,30:32:84.29:1656,84,0	0/0:32,0:32:72.25:0,72,2007	1/1:1,13:14:36.12:710,36,0	0/0:23,0:23:57.20:0,57,1655	0/0:26,0:26:72.25:0,72,2007	0/0:48,0:48:99:0,117,3288	0/0:24,0:24:66.23:0,66,1945	0/0:23,0:23:60.21:0,60,1729	0/0:28,0:28:81.28:0,81,2307	1/1:4,22:26:42.14:783,42,0	0/0:31,0:31:75.26:0,75,2186	0/0:28,0:28:72.25:0,72,2032	0/0:2,0:2:6.02:0,6,178
chr10	9247973	.	A	AGAACT	781	PASS	AB=0.667;AC=1;AF=0.018;AN=56;BaseQRankSum=5.740;DP=796;FS=0.000;HRun=0;HaplotypeScore=144.7176;InbreedingCoeff=-0.0143;MQ=90.96;MQ0=0;MQRankSum=-4.711;QD=43.39;ReadPosRankSum=0.344;VQSLOD=3.4755;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,160,3586	0/0:12,0:12:36.12:0,36,826	0/0:37,0:38:55.51:0,56,2283	0/0:27,0:27:76.81:0,77,1543	0/0:37,0:37:99:0,111,2586	0/0:30,0:30:90.31:0,90,2073	0/0:18,0:18:54.19:0,54,1235	0/0:31,0:31:87.28:0,87,1852	0/1:9,8:18:26.46:855,0,26	0/0:29,0:29:87.28:0,87,1966	0/0:36,0:36:99:0,108,2428	0/0:23,0:23:69.24:0,69,1607	0/0:34,0:34:99:0,102,2371	0/0:27,0:27:78.27:0,78,1793	0/0:28,0:28:84.29:0,84,1911	0/0:26,0:26:69.71:0,70,1589	0/0:38,0:38:99:0,108,2479	0/0:19,0:19:57.19:0,57,1289	0/0:27,0:26:78.26:0,78,1737	0/0:27,0:27:81.28:0,81,1887	0/0:29,0:29:83.82:0,84,1864	0/0:28,0:28:81.28:0,81,1866	0/0:30,0:30:87.26:0,87,1906	0/0:31,0:31:84.29:0,84,1955	0/0:29,0:29:87.28:0,87,1970	0/0:30,0:30:87.30:0,87,1988	0/0:35,0:35:99:0,105,2404	0/0:5,0:5:15.05:0,15,349
chr10	9247975	.	A	ATTG	414.70	PASS	AB=0.640;AC=1;AF=0.018;AN=56;BaseQRankSum=5.900;DP=797;FS=1.093;HRun=0;HaplotypeScore=111.7602;InbreedingCoeff=-0.0187;MQ=91.79;MQ0=0;MQRankSum=-4.925;QD=25.92;ReadPosRankSum=1.517;VQSLOD=3.9287;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,157,2731	0/0:13,0:13:39.12:0,39,660	0/0:40,0:40:95.73:0,96,1847	0/0:27,0:27:74.28:0,74,1157	0/0:38,0:38:99:0,114,1983	0/0:30,0:30:87.30:0,87,1535	0/0:18,0:18:51.17:0,51,895	0/0:31,0:31:90.30:0,90,1537	0/1:7,9:16:74.64:489,0,75	0/0:28,0:28:84.28:0,84,1458	0/0:36,0:36:99:0,108,1842	0/0:23,0:23:69.24:0,69,1218	0/0:35,0:35:99:0,102,1795	0/0:27,0:27:81.28:0,81,1416	0/0:28,0:28:81.28:0,81,1414	0/0:26,0:26:78.26:0,78,1340	0/0:38,0:38:99:0,114,1997	0/0:18,0:18:54.19:0,54,953	0/0:28,0:27:81.27:0,81,1403	0/0:28,0:28:81.28:0,81,1429	0/0:28,0:28:80.93:0,81,1429	0/0:29,0:29:84.27:0,84,1448	0/0:29,0:29:84.29:0,84,1476	0/0:30,0:30:87.30:0,87,1519	0/0:29,0:29:87.30:0,87,1535	0/0:30,0:30:87.30:0,87,1525	0/0:36,0:36:99:0,108,1876	0/0:5,0:5:15.05:0,15,265
chr10	9249229	.	G	GA	15183.22	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-13.396;DP=714;FS=1.628;HRun=5;HaplotypeScore=67.5732;InbreedingCoeff=0.9998;MQ=88.28;MQ0=0;MQRankSum=-5.608;QD=34.66;ReadPosRankSum=3.850;VQSLOD=5.0920;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,138,1473	1/1:1,16:17:48.11:611,48,0	0/0:30,0:30:81.17:0,81,848	0/0:24,0:24:57.11:0,57,600	0/0:31,0:31:90.22:0,90,967	0/0:26,0:26:78.20:0,78,838	0/0:28,0:28:75.19:0,75,806	0/0:30,0:30:87.22:0,87,935	1/1:1,14:15:39.13:513,39,0	1/1:0,33:33:99:1302,99,0	1/1:1,19:20:48.11:612,48,0	1/1:1,24:25:72.23:946,72,0	1/1:3,26:29:69.22:908,69,0	1/1:1,25:26:69.22:908,69,0	1/1:1,27:28:72.23:947,72,0	0/0:22,0:22:66.17:0,66,709	1/1:2,28:30:81.26:1066,81,0	0/0:11,0:11:30.01:0,30,300	1/1:1,20:21:60.20:789,60,0	1/1:4,29:33:81.22:1046,81,0	1/1:1,23:24:69.22:908,69,0	1/1:2,22:24:63.20:829,63,0	1/1:6,16:22:48.15:624,48,0	1/1:1,22:23:57.16:732,57,0	0/0:27,0:27:75.16:0,75,796	1/1:0,27:27:81.26:1061,81,0	1/1:3,25:29:78.25:1025,78,0	1/1:0,12:12:27.09:355,27,0
chr10	9249371	.	GCACTCTGACCC	G	21315.26	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=17.832;DP=629;FS=9.845;HRun=0;HaplotypeScore=252.3290;InbreedingCoeff=0.9904;MQ=88.60;MQ0=0;MQRankSum=-18.322;QD=71.05;ReadPosRankSum=3.153;VQSLOD=3.3398;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,135,7450	1/1:3,9:12:27.09:951,27,0	0/0:28,0:28:84.27:0,84,3858	0/0:29,0:29:75.26:0,75,3688	0/0:23,0:23:63.22:0,63,3423	0/0:17,0:17:51.18:0,51,2820	0/0:23,0:23:69.24:0,69,3759	0/0:27,0:27:72.25:0,72,3628	0/0:21,0:21:63.22:0,63,3181	1/1:2,26:28:78.25:2614,78,0	1/1:3,10:13:21.07:665,21,0	1/1:3,19:22:48.16:1692,48,0	1/1:2,21:23:54.14:1788,54,0	1/1:4,19:23:45.15:1587,45,0	1/1:4,21:25:54.19:1905,54,0	0/0:33,0:33:96.33:0,96,5131	1/1:5,7:12:15.05:529,15,0	0/0:28,0:28:81.28:0,81,4293	1/1:3,4:7:12.04:423,12,0	1/1:5,18:23:42.14:1360,42,0	0/0:43,0:43:99:0,126,6972	1/1:7,15:22:45.15:1553,45,0	1/1:4,14:18:27.07:920,27,0	1/1:3,15:18:33.11:953,33,0	0/0:11,0:11:33.11:0,33,1856	1/1:1,20:21:57.20:1878,57,0	1/1:6,21:27:57.20:1967,57,0	1/1:0,5:5:15.05:529,15,0
chr10	9249536	.	AT	A	6844.34	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-9.656;DP=638;FS=0.328;HRun=2;HaplotypeScore=129.0652;InbreedingCoeff=0.9956;MQ=70.61;MQ0=5;MQRankSum=-0.601;QD=34.57;ReadPosRankSum=1.666;VQSLOD=4.3446;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,28:28:72.23:934,72,0	0/0:8,0:8:21.03:0,21,271	0/0:10,0:10:14:0,14,124	0/0:14,0:13:28.86:0,29,351	1/1:0,20:20:57.19:739,57,0	1/1:0,22:22:57.19:740,57,0	1/1:1,27:28:78.17:990,78,0	1/1:2,34:36:99:1340,105,0	0/0:28,0:27:75.15:0,75,1072	0/0:23,0:23:66.22:0,66,972	0/0:22,0:22:63.12:0,63,879	0/0:21,0:21:54.14:0,54,783	0/0:33,0:33:78.25:0,78,1132	0/0:24,0:24:54.17:0,54,781	0/0:28,0:28:75.25:0,75,1117	1/1:1,30:31:78.25:1013,78,0	0/0:11,0:11:27.09:0,27,401	1/1:1,13:14:36.12:467,36,0	0/0:15,0:15:45.12:0,45,645	0/0:31,0:30:84.21:0,84,1210	0/0:24,0:23:57.02:0,57,818	0/0:20,0:20:56.98:0,57,739	0/0:21,0:21:48.12:0,48,677	0/0:29,0:29:72.24:0,72,1075	1/1:0,19:19:48.16:622,48,0	0/0:34,0:34:99:0,99,1406	0/0:34,0:33:84.27:0,84,1219	0/0:10,0:10:30.06:0,30,390
chr10	9250234	.	C	CATAG	1520.82	PASS	AB=0.831;AC=13;AF=0.260;AN=50;BaseQRankSum=-5.248;DP=582;FS=0.791;HRun=0;HaplotypeScore=102.9545;InbreedingCoeff=0.3792;MQ=70.85;MQ0=3;MQRankSum=-0.741;QD=8.84;ReadPosRankSum=0.866;VQSLOD=2.3547;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:20,5:25:14.83:345,15,0	0/1:8,4:12:36.08:129,0,36	./.	./.	0/1:28,4:32:99:183,0,200	0/0:20,0:20:27.07:0,27,383	0/0:18,0:18:12.01:0,12,139	./.	0/0:13,0:25:23.84:0,24,223	0/0:26,0:27:18.05:0,18,235	0/0:22,0:23:15.03:0,15,188	1/1:8,5:12:9.03:207,9,0	0/0:22,0:22:24.08:0,24,358	0/0:20,0:20:18.06:0,18,269	0/0:29,0:29:35.79:0,36,519	0/0:15,0:15:9.03:0,9,135	0/0:20,0:20:15.05:0,15,225	0/0:14,0:13:21.07:0,21,309	0/0:10,0:10:3.01:0,3,45	0/1:20,7:28:26.96:327,0,27	1/1:11,0:11:6.02:95,6,0	0/0:22,0:22:36.08:0,36,477	1/1:16,5:21:6.02:138,6,0	0/1:9,5:14:8.91:238,0,9	0/0:23,0:23:30.10:0,30,449	0/0:20,0:20:24.07:0,24,340	0/0:22,0:22:21.07:0,21,310	0/1:16,0:16:14.83:15,0,372
chr10	9250834	.	CTGTTGT	C	4447.46	PASS	AB=0.708;AC=20;AF=0.370;AN=54;BaseQRankSum=0.313;DP=746;FS=3.151;HRun=0;HaplotypeScore=171.0951;InbreedingCoeff=0.7799;MQ=67.12;MQ0=6;MQRankSum=-2.452;QD=20.22;ReadPosRankSum=4.086;VQSLOD=4.1024;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:49:45.60:0,46,1057	1/1:5,4:9:9.03:182,9,0	./.	0/0:39,0:31:3:0,3,27	0/0:23,0:30:29.73:0,30,432	0/0:13,0:22:21.07:0,21,519	0/0:32,0:31:39.12:0,39,882	0/0:34,0:34:36.10:0,36,640	0/0:25,0:33:66.20:0,66,1448	0/0:20,0:28:36.11:0,36,892	0/0:12,0:18:21.91:0,22,449	1/1:12,8:20:15.05:304,15,0	1/1:11,11:22:33.11:668,33,0	1/1:10,11:22:30.10:589,30,0	0/0:25,0:35:48.16:0,48,1194	0/0:10,0:24:42.14:0,42,1077	1/1:18,10:28:12.04:219,12,0	0/0:23,0:31:12.04:0,12,288	1/1:20,7:26:21.01:389,21,0	1/1:9,6:15:15.05:303,15,0	0/0:37,0:37:21.54:0,22,488	0/1:7,1:11:21.90:122,0,22	0/0:23,0:23:33.09:0,33,679	0/0:30,0:38:30.04:0,30,634	0/0:9,0:19:18.04:0,18,366	0/1:15,11:28:99:599,0,128	1/1:10,17:28:43.44:889,43,0	1/1:6,4:10:9.03:182,9,0
chr10	9253153	.	G	GC	28334.59	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-2.649;DP=737;FS=4.851;HRun=1;HaplotypeScore=124.0081;InbreedingCoeff=0.8701;MQ=79.82;MQ0=0;MQRankSum=-8.104;QD=40.42;ReadPosRankSum=5.041;VQSLOD=4.1432;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,42:43:99:1753,117,0	1/1:0,12:12:36.12:540,36,0	0/0:21,0:21:43.68:0,44,546	0/0:15,0:15:1.22:0,1,287	1/1:1,28:29:81.27:1212,81,0	1/1:0,17:17:45.15:674,45,0	1/1:1,27:28:78.26:1169,78,0	1/1:4,32:36:93.25:1309,93,0	1/1:0,22:22:63.21:944,63,0	1/1:0,29:29:84.27:1239,84,0	1/1:0,18:18:51.17:764,51,0	1/1:1,23:24:63.21:944,63,0	1/1:1,34:35:96.33:1438,96,0	1/1:2,23:26:66.21:961,66,0	1/1:1,36:37:99:1574,105,0	1/1:0,29:29:84.28:1259,84,0	1/1:0,32:32:87.29:1302,87,0	1/1:0,17:17:45.15:674,45,0	1/1:3,19:22:63.17:910,63,0	1/1:4,23:27:60.20:899,60,0	1/1:4,26:30:72.15:1026,72,0	1/1:0,28:28:75.25:1124,75,0	1/1:2,33:35:90.06:1318,90,0	1/1:0,27:27:78.26:1169,78,0	1/1:0,44:44:99:1888,126,0	1/1:1,22:23:63.18:895,63,0	1/1:0,22:21:66.10:986,66,0	1/1:0,8:8:24.08:360,24,0
chr10	9254955	.	CGTGTGTGTGTGTGTGTGTGTGT	C	10768.64	PASS	AB=0.786;AC=31;AF=0.574;AN=54;BaseQRankSum=11.509;DP=525;FS=4.101;HRun=0;HaplotypeScore=267.4656;InbreedingCoeff=0.6702;MQ=62.25;MQ0=14;MQRankSum=-9.223;QD=41.10;ReadPosRankSum=3.976;VQSLOD=3.7009;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:43:81.25:0,81,5291	1/1:7,6:13:11.72:407,12,0	./.	0/0:24,0:20:14.37:0,14,665	0/0:26,0:28:39.12:0,39,2633	0/0:30,0:30:45.63:0,46,3492	0/0:22,0:22:27.09:0,27,1925	0/0:18,0:16:18.06:0,18,685	0/1:12,0:25:99:655,0,240	1/1:12,6:17:7.76:598,8,0	1/1:5,14:19:9.72:947,10,0	0/1:8,6:14:18.62:643,0,19	1/1:6,9:14:24.08:1343,24,0	1/1:4,5:10:9.03:502,9,0	1/1:4,12:15:27.09:1487,27,0	0/0:10,0:15:24.07:0,24,1673	0/1:13,0:12:91.43:198,0,91	0/0:12,0:15:38.49:0,38,2364	1/1:8,3:8:6.02:217,6,0	1/1:5,12:16:24.08:965,24,0	0/0:21,0:20:18.53:0,19,289	1/1:10,10:20:9.33:364,9,0	1/1:8,6:13:6.02:307,6,0	1/1:13,2:15:6.02:107,6,0	0/0:20,0:25:39.13:0,39,2676	1/1:11,6:17:18.42:744,18,0	1/1:8,8:15:21.07:935,21,0	1/1:3,4:7:6.02:349,6,0
chr10	9256634	.	CAGTA	C	777.84	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.110;DP=602;FS=3.394;HRun=0;HaplotypeScore=97.5229;InbreedingCoeff=0.9982;MQ=88.21;MQ0=0;MQRankSum=-2.771;QD=45.76;ReadPosRankSum=-0.089;VQSLOD=4.0420;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:69.24:0,69,1806	0/0:12,0:12:36.12:0,36,943	0/0:20,0:20:39.13:0,39,912	0/0:23,0:23:54.15:0,54,1191	0/0:28,0:28:78.27:0,78,2042	0/0:23,0:23:60.21:0,60,1531	0/0:28,0:28:75.26:0,75,1941	0/0:46,0:46:99:0,111,2762	1/1:1,16:17:48.16:873,48,0	0/0:15,0:15:45.15:0,45,1138	0/0:25,0:25:72.25:0,72,1886	0/0:15,0:15:42.14:0,42,1094	0/0:29,0:29:78.27:0,78,1980	0/0:21,0:21:57.20:0,57,1478	0/0:23,0:23:63.22:0,63,1621	0/0:17,0:17:48.16:0,48,1216	0/0:16,0:16:45.15:0,45,1179	0/0:10,0:10:30.07:0,30,713	0/0:25,0:25:69.23:0,69,1729	0/0:26,0:26:69.24:0,69,1806	0/0:24,0:24:60.21:0,60,1558	0/0:14,0:14:42.14:0,42,1076	0/0:17,0:17:45.15:0,45,1179	0/0:10,0:10:27.09:0,27,676	0/0:23,0:23:69.24:0,69,1780	0/0:21,0:21:60.20:0,60,1502	0/0:30,0:30:81.28:0,81,2113	0/0:17,0:17:48.16:0,48,1257
chr10	9257086	.	C	CGG	7978.16	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=5.300;DP=659;FS=0.000;HRun=6;HaplotypeScore=166.8615;InbreedingCoeff=0.9460;MQ=91.25;MQ0=0;MQRankSum=-10.750;QD=13.14;ReadPosRankSum=4.973;VQSLOD=0.9056;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,0:54:99:395,112,0	1/1:3,0:6:7.49:26,7,0	0/0:29,0:29:68.20:0,68,789	0/0:23,0:23:66.15:0,66,761	1/1:8,0:25:35.04:142,35,0	1/1:1,0:23:42.77:154,43,0	1/1:3,0:21:39.93:140,40,0	1/1:7,0:36:70.01:379,70,0	1/1:4,0:22:42.77:159,43,0	1/1:7,17:24:44.92:654,45,0	1/1:0,16:17:39.09:628,39,0	1/1:2,0:25:52.40:184,52,0	1/1:2,0:16:29.82:105,30,0	1/1:1,0:21:47.41:167,47,0	1/1:1,33:35:99:1671,99,0	1/1:2,0:19:37.43:132,37,0	1/1:2,1:32:70.38:288,70,0	1/1:1,0:11:24.95:88,25,0	1/1:5,0:24:47.41:167,47,0	1/1:1,0:29:58.28:226,58,0	1/1:2,0:38:87.34:307,87,0	1/1:4,0:22:39.65:139,40,0	1/1:1,13:14:33.02:527,33,0	1/1:1,18:19:45.15:761,45,0	1/1:1,0:22:47.41:167,47,0	1/1:2,0:26:52.77:199,53,0	1/1:2,0:18:37.15:130,37,0	1/1:1,0:6:12.48:44,12,0
chr10	9257366	.	GGA	G	368.70	PASS	AB=0.917;AC=12;AF=0.222;AN=54;BaseQRankSum=-0.396;DP=626;FS=26.322;HRun=0;HaplotypeScore=147.6055;InbreedingCoeff=0.3690;MQ=66.04;MQ0=10;MQRankSum=2.391;QD=2.77;ReadPosRankSum=0.371;VQSLOD=1.1918;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:2.98:0,3,22	0/0:9,0:9:2.97:0,3,20	0/0:25,0:22:0:0,0,0	./.	0/0:27,0:27:3.01:0,3,31	0/0:22,0:22:0:0,0,0	0/0:27,0:27:4.88:0,5,38	0/0:40,0:40:28.25:0,28,201	0/0:25,0:24:5.15:0,5,50	1/1:16,3:17:7.26:96,7,0	1/1:7,2:8:6.01:66,6,0	0/0:24,0:24:14.17:0,14,90	0/0:29,0:29:5.02:0,5,77	0/0:33,0:32:10:0,10,78	0/1:29,5:29:8.31:200,0,8	0/0:24,0:24:8.64:0,9,167	0/0:10,0:10:2.68:0,3,11	0/0:18,0:18:17.37:0,17,193	0/0:19,0:19:24.20:0,24,252	0/0:31,0:31:3.01:0,3,32	0/1:25,1:25:18.19:18,0,103	1/1:16,0:16:0.47:1,0,0	1/1:11,1:12:3.48:34,3,0	1/1:14,2:13:1.04:81,1,0	0/0:25,0:24:10.77:0,11,79	0/0:25,0:24:22.46:0,22,221	0/0:35,0:33:29.46:0,29,208	0/0:4,0:4:0.47:0,0,1
chr10	9257367	.	G	GAT	7698.16	PASS	AB=0.792;AC=50;AF=0.893;AN=56;BaseQRankSum=-1.726;DP=630;FS=18.472;HRun=0;HaplotypeScore=147.3812;InbreedingCoeff=0.6266;MQ=64.12;MQ0=12;MQRankSum=-3.648;QD=13.05;ReadPosRankSum=2.656;VQSLOD=3.5859;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:25:23.90:191,24,0	1/1:11,0:11:17.51:151,18,0	0/0:24,0:21:53.89:0,54,515	0/0:16,0:9:16.96:0,17,158	1/1:28,0:28:24.73:196,25,0	1/1:22,0:22:23.78:198,24,0	1/1:27,0:27:35.77:297,36,0	1/1:40,0:40:68.67:835,69,0	1/1:23,0:22:34:266,34,0	1/1:19,0:17:46.06:403,46,0	1/1:9,0:8:20.03:142,20,0	1/1:23,0:23:23.79:248,24,0	1/1:31,0:31:18.83:298,19,0	1/1:33,0:32:33.21:316,33,0	1/1:32,1:28:76.22:569,76,0	1/1:24,0:24:38.18:345,38,0	1/1:10,0:10:20.65:161,21,0	0/1:18,0:18:4.60:209,0,5	1/1:19,0:19:14.25:326,14,0	1/1:31,0:30:59.87:491,60,0	0/1:8,20:27:23.38:93,0,23	1/1:14,0:14:21.44:175,21,0	1/1:13,0:13:26.65:204,27,0	1/1:15,2:13:25.76:166,26,0	1/1:23,1:23:39:376,39,0	1/1:26,0:25:54.98:534,55,0	1/1:36,0:34:54.30:437,54,0	1/1:6,0:5:8.97:71,9,0
chr10	9257402	.	AGAGG	A	1298.35	PASS	AB=0.991;AC=18;AF=0.346;AN=52;BaseQRankSum=6.484;DP=652;FS=9.029;HRun=0;HaplotypeScore=195.9522;InbreedingCoeff=0.0905;MQ=41.05;MQ0=35;MQRankSum=-0.293;QD=3.53;ReadPosRankSum=-1.130;VQSLOD=1.6358;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:16:0.75:0,1,2	1/1:12,0:12:17.87:138,18,0	./.	./.	0/1:30,0:30:0:0,0,0	0/0:15,0:15:2.97:0,3,23	0/0:22,0:20:7:0,7,46	0/1:43,0:40:13.98:191,0,14	0/0:23,0:22:32.67:0,33,357	0/0:16,0:15:37.68:0,38,274	0/0:16,0:15:10.99:0,11,76	1/1:24,1:25:7.60:77,8,0	0/1:35,4:38:93.44:114,0,93	1/1:30,5:33:6.99:186,7,0	0/0:28,0:23:41.54:0,42,231	0/0:20,0:20:7.55:0,8,44	0/0:10,0:10:1.82:0,2,5	0/1:17,0:17:27.83:31,0,28	0/1:22,0:22:63.89:64,0,303	0/1:28,0:26:43.57:70,0,44	0/0:28,0:26:6.96:0,7,135	1/1:17,3:19:31.93:201,32,0	0/0:17,0:17:38.72:0,39,310	0/1:21,0:17:14.30:14,0,90	0/0:15,0:13:8.02:0,8,63	0/1:28,0:25:99:209,0,158	0/1:36,0:34:64.48:80,0,64	0/1:12,0:11:12.60:82,0,13
chr10	9257403	.	G	GGT	1359.94	PASS	AB=0.969;AC=11;AF=0.212;AN=52;BaseQRankSum=-1.178;DP=649;FS=43.355;HRun=0;HaplotypeScore=193.6170;InbreedingCoeff=-0.0565;MQ=40.98;MQ0=34;MQRankSum=7.187;QD=5.42;ReadPosRankSum=1.907;VQSLOD=1.6385;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:16:1.28:0,1,38	0/1:12,0:12:20.56:21,0,36	./.	./.	0/0:29,0:29:3.01:0,3,45	0/0:15,0:15:0:0,0,0	0/0:22,0:20:14.97:0,15,139	0/0:45,0:42:75.29:0,75,651	0/0:22,0:21:32.51:0,33,418	0/0:15,0:15:16.62:0,17,238	0/1:16,0:15:8.61:9,0,30	0/1:25,0:25:99:112,0,175	0/1:39,0:38:99:320,0,139	0/1:35,0:33:81.80:422,0,82	0/1:21,0:22:33.24:33,0,349	0/0:19,0:19:31.93:0,32,360	0/0:10,0:10:8.84:0,9,60	0/0:17,0:17:26.91:0,27,344	0/0:23,0:23:18.77:0,19,449	0/1:28,0:26:2.99:3,0,40	0/0:26,0:24:9.01:0,9,163	1/1:20,0:19:23.05:428,23,0	0/0:17,0:18:29.86:0,30,482	0/1:12,6:17:17.67:121,0,18	0/0:15,0:13:14.97:0,15,148	0/1:28,0:25:32.32:32,0,321	0/0:36,0:34:32.22:0,32,387	0/0:11,0:11:3.07:0,3,28
chr10	9257406	.	GTAGA	G	623.83	PASS	AB=0.974;AC=10;AF=0.250;AN=40;BaseQRankSum=-4.004;DP=602;FS=6.592;HRun=0;HaplotypeScore=196.9554;InbreedingCoeff=0.5227;MQ=41.20;MQ0=35;MQRankSum=2.349;QD=4.84;ReadPosRankSum=1.067;VQSLOD=2.0810;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:16,0:14:0.13:0,0,0	0/0:12,0:12:17.95:0,18,149	./.	./.	./.	./.	1/1:22,0:20:1.14:2,1,0	./.	0/0:21,0:20:30.10:0,30,690	0/1:14,0:14:99:137,0,144	1/1:7,8:14:2.92:46,3,0	0/0:23,0:23:14.75:0,15,124	0/0:37,0:36:32.84:0,33,351	0/0:32,0:30:32.98:0,33,319	1/1:17,2:20:36.09:511,36,0	./.	./.	./.	0/0:25,0:24:14.95:0,15,122	0/0:22,0:20:15.01:0,15,157	0/1:21,0:20:5.88:43,0,6	0/0:19,0:18:33.07:0,33,340	0/0:18,0:19:45.13:0,45,891	0/0:19,0:16:9.03:0,9,136	0/1:14,0:12:0:0,0,0	0/0:26,0:23:38.74:0,39,312	0/0:33,0:31:23.81:0,24,238	0/0:10,0:10:14.83:0,15,206
chr10	9258358	.	G	GGT	9235.78	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-5.562;DP=723;FS=1.819;HRun=0;HaplotypeScore=144.1254;InbreedingCoeff=0.9972;MQ=73.60;MQ0=0;MQRankSum=-3.549;QD=45.05;ReadPosRankSum=0.183;VQSLOD=5.3973;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,28:28:66.23:1208,66,0	0/0:20,0:20:57.19:0,57,814	0/0:27,0:25:66.11:0,66,882	0/0:32,0:31:74.96:0,75,979	1/1:4,24:28:57.19:1002,57,0	1/1:1,20:22:60.21:1098,60,0	1/1:3,19:22:60.17:1016,60,0	1/1:4,42:47:99:2389,135,0	0/0:22,0:22:66.20:0,66,926	0/0:41,0:41:99:0,120,1637	0/0:27,0:27:81.22:0,81,1088	0/0:24,0:24:72.23:0,72,1013	0/0:28,0:28:81.26:0,81,1141	0/0:27,0:27:78.26:0,78,1113	0/0:23,0:23:69.19:0,69,965	1/1:2,25:27:66.23:1206,66,0	0/0:29,0:29:87.23:0,87,1198	1/1:1,5:6:15.05:274,15,0	0/0:19,0:19:54.17:0,54,754	0/0:35,0:35:99:0,102,1385	0/0:25,0:25:69.20:0,69,948	0/0:19,0:19:54.15:0,54,720	0/0:22,0:22:66.22:0,66,941	0/0:44,0:44:99:0,132,1869	1/1:1,24:25:57.20:1042,57,0	0/0:25,0:25:66.20:0,66,910	0/0:20,0:20:57.19:0,57,815	0/0:9,0:9:27.09:0,27,385
chr10	9258891	.	GAC	G	5577.78	PASS	AB=0.852;AC=25;AF=0.446;AN=56;BaseQRankSum=4.140;DP=761;FS=1.048;HRun=0;HaplotypeScore=294.1666;InbreedingCoeff=-0.8033;MQ=50.32;MQ0=11;MQRankSum=-4.633;QD=8.84;ReadPosRankSum=-3.027;VQSLOD=3.6485;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:28,1:29:56.47:56,0,369	0/1:10,2:12:52.74:149,0,53	0/0:52,0:26:53.51:0,54,924	0/0:66,2:38:4.54:0,5,597	0/1:22,4:26:99:197,0,244	0/1:27,11:38:99:339,0,437	0/1:14,0:14:58.88:97,0,59	0/1:41,4:44:99:165,0,533	0/1:22,7:32:99:415,0,363	0/1:19,1:19:99:218,0,171	0/1:22,3:25:40.27:40,0,274	0/1:11,5:16:99:185,0,152	0/1:19,7:27:99:286,0,280	0/1:19,9:29:99:410,0,311	0/1:23,4:29:99:438,0,234	0/1:16,5:22:99:250,0,339	0/1:17,2:19:99:141,0,147	0/1:11,0:12:50.75:51,0,159	0/1:18,4:22:99:238,0,197	0/1:29,5:34:99:244,0,517	0/1:20,0:22:0.16:0,0,132	0/1:19,3:22:99:186,0,190	0/1:19,5:25:99:196,0,190	0/1:11,0:11:10.97:32,0,11	0/1:20,8:31:99:456,0,242	0/1:19,2:22:99:297,0,166	0/1:32,7:39:99:491,0,454	0/0:6,1:7:3.98:0,4,44
chr10	9258895	.	G	GAGAA	10824.62	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=3.622;DP=730;FS=0.000;HRun=0;HaplotypeScore=295.2606;InbreedingCoeff=0.7579;MQ=46.28;MQ0=10;MQRankSum=-2.840;QD=17.32;ReadPosRankSum=3.898;VQSLOD=3.8526;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:26,1:27:45.37:310,45,0	1/1:11,0:11:20.92:170,21,0	0/0:44,0:21:54.16:0,54,934	0/0:61,0:34:22.05:0,22,637	1/1:26,0:24:48.53:359,49,0	1/1:36,0:36:84.49:680,84,0	1/1:14,0:14:25.92:243,26,0	1/1:47,0:46:61.73:1037,62,0	1/1:28,2:30:78.05:658,78,0	1/1:21,0:19:44.61:552,45,0	1/1:25,0:24:32.93:231,33,0	1/1:15,0:15:35.86:346,36,0	1/1:25,0:25:42.97:368,43,0	1/1:28,0:28:72.41:681,72,0	1/1:28,1:29:64.96:459,65,0	1/1:22,1:23:20.16:405,20,0	1/1:20,0:20:17.14:280,17,0	1/1:12,1:13:1.87:186,2,0	1/1:20,0:19:1.79:264,2,0	1/1:31,1:32:62.91:592,63,0	1/1:21,0:21:19.39:117,19,0	1/1:25,0:24:27.56:298,28,0	1/1:25,0:25:46.79:363,47,0	1/1:13,0:13:4.97:30,5,0	1/1:29,1:30:63.32:483,63,0	1/1:22,0:21:48.11:401,48,0	1/1:40,0:39:99:1021,105,0	1/1:6,1:7:14.81:291,15,0
chr10	9258897	.	GAGAC	G	12503.58	PASS	AB=1.000;AC=51;AF=0.911;AN=56;BaseQRankSum=3.240;DP=723;FS=9.932;HRun=0;HaplotypeScore=278.6250;InbreedingCoeff=0.7517;MQ=46.68;MQ0=10;MQRankSum=-0.972;QD=20.20;ReadPosRankSum=2.820;VQSLOD=3.1704;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:27:31.28:224,31,0	1/1:11,0:11:20.69:216,21,0	0/0:44,0:22:59.47:0,59,1276	0/0:57,0:34:23.97:0,24,932	1/1:24,1:23:38.18:378,38,0	1/1:34,4:38:91.54:889,92,0	1/1:15,1:16:17.32:274,17,0	1/1:36,8:43:79.03:1047,79,0	1/1:27,2:29:31.62:620,32,0	1/1:19,2:19:45.73:559,46,0	1/1:23,3:25:26.21:197,26,0	1/1:13,2:15:38.52:408,39,0	1/1:23,1:24:39.61:455,40,0	1/1:25,2:27:73.55:851,74,0	1/1:28,1:29:64.22:650,64,0	1/1:22,1:23:50.67:558,51,0	1/1:18,2:20:27.23:284,27,0	0/1:13,0:13:4.07:197,0,4	1/1:18,2:20:7.92:420,8,0	1/1:30,2:32:71.70:603,72,0	1/1:22,0:22:15.94:148,16,0	1/1:21,4:24:44.67:456,45,0	1/1:21,3:24:40.65:426,41,0	1/1:10,1:11:5.81:54,6,0	1/1:25,3:28:60.92:702,61,0	1/1:20,2:21:47.55:591,48,0	1/1:37,2:38:95.73:1112,96,0	1/1:6,1:7:14.49:186,14,0
chr10	9258899	.	GAC	G	7018.41	PASS	AB=0.984;AC=30;AF=0.536;AN=56;BaseQRankSum=-2.377;DP=696;FS=3.621;HRun=0;HaplotypeScore=270.7041;InbreedingCoeff=-0.5638;MQ=45.95;MQ0=7;MQRankSum=-2.999;QD=11.76;ReadPosRankSum=-5.396;VQSLOD=3.3406;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:28:72.55:73,0,121	1/1:11,0:11:4.29:158,4,0	0/0:43,0:22:57:0,57,913	0/0:54,1:32:31.44:0,31,676	0/1:24,0:22:41.49:240,0,41	0/1:38,0:38:60.10:481,0,60	1/1:16,0:16:6.35:132,6,0	0/1:36,0:35:37.34:393,0,37	0/1:28,0:28:90.66:444,0,91	1/1:21,0:19:4.44:295,4,0	0/1:17,7:24:53.53:68,0,54	0/1:14,0:14:11.57:198,0,12	0/1:22,0:22:45.42:326,0,45	0/1:27,0:27:24.68:490,0,25	0/1:29,0:29:48.65:451,0,49	0/1:21,0:21:77.10:276,0,77	0/1:15,1:16:5.63:175,0,6	0/1:13,0:13:59.25:59,0,60	0/1:19,0:19:38.15:335,0,38	0/1:32,0:32:99:340,0,106	0/1:22,0:23:10.43:39,0,10	0/1:25,0:24:20.15:192,0,20	0/1:24,0:24:35.93:263,0,36	1/1:9,0:9:3.01:37,3,0	0/1:27,0:27:2.36:480,0,2	0/1:23,0:22:4.40:378,0,4	0/1:40,0:39:67.34:641,0,67	0/1:7,0:7:3.79:55,0,4
chr10	9258901	.	C	CAGAG	15946.61	PASS	AB=0.802;AC=28;AF=0.500;AN=56;BaseQRankSum=-6.630;DP=696;FS=8.511;HRun=0;HaplotypeScore=249.1084;InbreedingCoeff=-0.7237;MQ=45.50;MQ0=5;MQRankSum=-2.555;QD=26.53;ReadPosRankSum=-1.785;VQSLOD=3.0562;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:18,12:31:99:342,0,230	0/1:4,6:11:13.08:380,0,13	0/0:40,0:22:55.86:0,56,864	0/0:53,0:32:21.23:0,21,811	0/1:17,6:21:75.65:661,0,76	0/1:36,3:39:99:1009,0,172	1/1:6,11:17:13.26:243,13,0	0/1:31,5:36:99:999,0,153	0/1:23,3:28:99:992,0,253	0/1:13,7:19:35.24:597,0,35	0/1:22,2:24:98.07:227,0,98	0/1:11,2:13:57.04:400,0,57	0/1:14,9:27:99:591,0,100	0/1:25,2:27:99:941,0,113	0/1:15,11:30:99:979,0,128	0/1:19,1:21:99:746,0,203	0/1:13,3:16:41.70:343,0,42	0/1:6,4:11:99:223,0,103	0/1:16,3:19:20.59:820,0,21	0/1:25,4:30:99:695,0,241	0/1:7,13:21:6.40:276,0,6	0/1:19,4:22:53.54:505,0,54	0/1:19,5:24:77.55:547,0,78	1/1:2,8:13:3.01:64,3,0	0/1:20,4:25:57.93:1090,0,58	0/1:13,11:23:71:950,0,71	0/1:34,5:38:99:1232,0,237	0/1:6,0:7:19.23:94,0,19
chr10	9259307	.	AC	A	363.49	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=0.074;DP=500;FS=7.895;HRun=7;HaplotypeScore=68.6527;InbreedingCoeff=0.9847;MQ=78.13;MQ0=2;MQRankSum=-0.542;QD=22.72;ReadPosRankSum=1.066;VQSLOD=3.6420;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:51.15:0,51,626	0/0:8,0:8:24.07:0,24,294	0/0:30,0:26:57.17:0,57,680	0/0:25,1:23:48.62:0,49,574	0/0:21,0:21:57.17:0,57,704	0/0:24,0:24:72.23:0,72,901	0/0:12,0:12:33.11:0,33,415	0/0:24,0:24:69.20:0,69,840	1/1:1,15:16:45.10:458,45,0	0/0:28,0:28:72.23:0,72,902	0/0:21,0:21:57.16:0,57,686	0/0:15,0:15:42.12:0,42,515	0/0:15,0:15:39.12:0,39,489	0/0:11,0:11:33.10:0,33,411	0/0:10,0:10:27.09:0,27,340	0/0:15,0:15:42.13:0,42,528	0/0:22,0:22:60.18:0,60,743	0/0:18,0:18:51.16:0,51,642	0/0:17,0:17:48.15:0,48,602	0/0:22,0:22:57.17:0,57,700	0/0:11,0:11:24.08:0,24,302	0/0:10,0:10:27.09:0,27,340	0/0:12,0:12:30.10:0,30,376	0/0:8,0:8:18.06:0,18,226	0/0:32,0:32:90.29:0,90,1131	0/0:25,0:25:63.20:0,63,792	0/0:16,0:16:39.11:0,39,476	0/0:11,0:10:33.07:0,33,390
chr10	9260737	.	GACAC	G	1080.51	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.410;DP=570;FS=0.848;HRun=0;HaplotypeScore=92.2221;InbreedingCoeff=0.9979;MQ=85.78;MQ0=0;MQRankSum=-2.796;QD=51.45;ReadPosRankSum=1.492;VQSLOD=4.2416;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:60.21:0,60,1678	0/0:9,0:9:27.09:0,27,717	0/0:25,0:25:66.23:0,66,1686	0/0:15,0:14:39.13:0,39,1013	0/0:20,0:20:54.19:0,54,1447	0/0:12,0:12:33.11:0,33,923	0/0:24,0:24:72.25:0,72,1971	0/0:34,0:34:99:0,102,2775	1/1:0,21:21:60.21:1175,60,0	0/0:16,0:16:48.16:0,48,1329	0/0:26,0:26:72.25:0,72,1938	0/0:16,0:16:48.16:0,48,1287	0/0:19,0:19:54.19:0,54,1475	0/0:16,0:16:48.16:0,48,1342	0/0:26,0:26:72.25:0,72,1944	0/0:13,0:13:36.11:0,36,922	0/0:22,0:22:60.21:0,60,1656	0/0:14,0:14:42.14:0,42,1108	0/0:18,0:18:54.19:0,54,1502	0/0:24,0:24:69.24:0,69,1909	0/0:23,0:23:69.24:0,69,1827	0/0:23,0:23:69.24:0,69,1909	0/0:22,0:22:63.22:0,63,1721	0/0:37,0:37:99:0,108,2985	0/0:20,0:20:60.21:0,60,1634	0/0:26,0:26:78.25:0,78,2062	0/0:17,0:17:42.14:0,42,1173	0/0:10,0:10:30.09:0,30,769
chr10	9260886	.	T	TCA	2200.98	PASS	AB=0.804;AC=34;AF=0.607;AN=56;BaseQRankSum=-0.872;DP=524;FS=7.785;HRun=0;HaplotypeScore=103.0228;InbreedingCoeff=0.2897;MQ=65.15;MQ0=21;MQRankSum=-1.165;QD=6.27;ReadPosRankSum=-1.900;VQSLOD=1.6884;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:2.43:0,2,6	1/1:6,0:6:9:87,9,0	0/0:40,0:14:12.90:0,13,116	0/0:45,0:12:5.68:0,6,42	0/1:16,0:16:6.89:17,0,7	0/0:11,0:11:2.58:0,3,10	0/0:18,0:18:2.68:0,3,11	1/1:19,0:18:2.87:18,3,0	0/1:14,0:15:15.41:15,0,17	1/1:11,3:13:29.13:435,29,0	0/1:9,8:18:50.77:177,0,51	1/1:13,0:13:3.48:33,3,0	1/1:11,0:11:9.25:80,9,0	1/1:13,0:13:9.46:81,9,0	0/1:6,15:22:37.38:267,0,37	0/0:15,0:15:8.03:0,8,33	0/1:12,0:12:4.57:17,0,5	0/0:13,0:13:2.68:0,3,11	1/1:19,0:20:23.74:192,24,0	1/1:23,0:20:4.35:28,4,0	1/1:24,0:23:0.47:1,0,0	1/1:22,0:22:8.98:95,9,0	1/1:5,14:19:11.78:156,12,0	0/1:9,24:34:36.05:397,0,36	0/0:10,0:10:5.36:0,5,22	1/1:15,0:15:17.73:134,18,0	1/1:17,0:18:15.21:103,15,0	1/1:16,0:14:5.77:34,6,0
chr10	9260903	.	CAT	C	3575.35	PASS	AB=1.000;AC=40;AF=0.714;AN=56;BaseQRankSum=-4.974;DP=557;FS=0.498;HRun=0;HaplotypeScore=102.0246;InbreedingCoeff=0.0585;MQ=54.20;MQ0=23;MQRankSum=2.282;QD=7.25;ReadPosRankSum=-4.010;VQSLOD=2.5865;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:28:50.09:415,50,0	1/1:7,0:7:4.38:44,4,0	0/1:33,0:6:25.22:25,0,36	0/1:37,0:5:1.09:1,0,20	1/1:11,8:19:14.03:105,14,0	1/1:14,0:14:29.96:264,30,0	1/1:1,27:28:5.51:55,6,0	1/1:3,15:17:46.99:342,47,0	1/1:22,0:22:41.61:331,42,0	0/1:18,0:17:99:156,0,157	0/0:16,0:16:4.40:0,4,229	0/1:12,0:12:4.91:82,0,5	0/1:14,0:14:29.21:132,0,29	0/1:15,0:14:29.24:84,0,29	0/0:28,0:28:4.10:0,4,296	1/1:0,15:15:9.03:137,9,0	1/1:13,2:15:16.27:235,16,0	1/1:3,12:15:3.01:46,3,0	0/1:20,0:19:63.69:120,0,64	1/1:19,0:16:29.74:240,30,0	1/1:27,0:25:29.86:234,30,0	0/1:23,0:23:59.95:69,0,60	0/0:20,0:20:14.99:0,15,146	0/1:37,0:37:39.04:39,0,305	1/1:0,15:15:5.79:91,6,0	1/1:10,0:9:1.84:70,2,0	0/1:14,0:14:1.39:47,0,1	1/1:17,0:15:24.86:212,25,0
chr10	9260905	.	T	TAC	1040.86	PASS	AB=0.969;AC=29;AF=0.537;AN=54;BaseQRankSum=1.001;DP=570;FS=0.777;HRun=0;HaplotypeScore=113.7344;InbreedingCoeff=0.1516;MQ=51.69;MQ0=24;MQRankSum=-1.636;QD=2.67;ReadPosRankSum=-0.543;VQSLOD=2.3296;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:32,0:31:0.43:19,0,0	1/1:8,0:8:2.99:25,3,0	./.	0/0:38,0:4:3.01:0,3,33	0/1:19,0:19:0:0,0,0	0/0:14,0:14:1.90:0,2,9	0/1:28,0:29:4.30:4,0,6	1/1:18,0:17:2.19:5,2,0	0/1:21,0:21:13.93:14,0,17	0/0:18,0:17:19.40:0,19,138	0/0:16,0:16:4.78:0,5,80	1/1:6,6:12:3.01:41,3,0	0/1:12,1:14:2.10:103,0,2	1/1:14,2:15:8.46:150,8,0	0/1:26,2:28:62:62,0,195	0/0:15,0:15:8.03:0,8,33	0/1:17,0:17:39.48:73,0,39	0/0:13,0:13:2.68:0,3,11	0/1:22,1:22:4.56:197,0,5	1/1:15,3:16:2.94:18,3,0	1/1:32,0:30:3:25,3,0	0/1:22,1:23:39.20:99,0,39	0/0:18,0:18:6.72:0,7,68	0/1:36,0:36:8.06:8,0,58	0/0:16,0:15:5.10:0,5,22	1/1:10,0:9:18.44:151,18,0	1/1:10,4:15:8.51:85,9,0	1/1:18,0:16:11.97:113,12,0
chr10	9261073	.	C	CTCCTCCCT	25185.57	PASS	AB=0.742;AC=33;AF=0.589;AN=56;BaseQRankSum=-9.382;DP=616;FS=5.079;HRun=0;HaplotypeScore=142.1670;InbreedingCoeff=0.9187;MQ=62.44;MQ0=5;MQRankSum=-13.474;QD=70.75;ReadPosRankSum=1.116;VQSLOD=4.4973;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:26:37.07:0,37,1271	1/1:5,9:14:27.05:1009,27,0	0/0:36,0:26:34.46:0,34,956	0/0:47,0:39:41.15:0,41,746	0/0:20,0:20:48.16:0,48,1196	0/0:16,0:16:39.13:0,39,1015	0/0:14,0:14:30.09:0,30,716	0/0:31,0:30:33.06:0,33,711	0/0:19,0:19:45.15:0,45,1136	1/1:9,19:28:72.14:2582,72,0	1/1:5,9:17:36.12:1488,36,0	1/1:12,16:27:57.20:2244,57,0	1/1:6,10:17:36.12:1332,36,0	1/1:5,15:23:36.12:1474,36,0	1/1:9,20:31:63.22:2425,63,0	0/0:20,0:20:42.13:0,42,1007	0/1:15,7:23:47.23:993,0,47	0/0:17,0:17:33.55:0,34,773	1/1:11,7:19:33.07:970,33,0	1/1:7,16:24:51.18:2045,51,0	1/1:5,6:10:12.04:484,12,0	1/1:11,10:21:30.10:1252,30,0	1/1:5,12:20:33.04:1239,33,0	1/1:4,11:17:14.70:607,15,0	0/0:13,0:13:39.12:0,39,958	1/1:9,18:27:69.12:2570,69,0	1/1:7,16:23:39.13:1621,39,0	1/1:4,6:10:24.08:849,24,0
chr10	9261709	.	GCTCTCTCTCT	G	732.83	PASS	AB=0.934;AC=18;AF=0.409;AN=44;BaseQRankSum=3.587;DP=517;FS=2.698;HRun=0;HaplotypeScore=164.0926;InbreedingCoeff=0.3906;MQ=59.69;MQ0=22;MQRankSum=-1.430;QD=4.36;ReadPosRankSum=0.562;VQSLOD=2.4064;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:7.25:0,7,287	0/0:8,0:7:2.90:0,3,16	./.	./.	0/0:10,0:10:3.01:0,3,40	0/0:15,0:17:13.85:0,14,322	0/0:34,0:32:10.14:0,10,313	0/0:38,0:38:8.31:0,8,110	0/0:21,0:21:14.31:0,14,339	0/0:18,0:17:1.25:0,1,3	./.	./.	1/1:20,0:20:2.91:20,3,0	0/1:16,1:17:83.62:102,0,84	1/1:13,0:15:0.47:1,0,0	0/0:10,0:10:9.50:0,9,234	1/1:18,2:16:3.01:85,3,0	0/0:21,0:19:13.91:0,14,374	1/1:16,1:16:2.01:77,2,0	./.	0/0:25,0:24:0:0,0,0	./.	1/1:13,0:14:3.01:48,3,0	1/1:19,0:20:3.01:82,3,0	0/0:16,0:16:3:0,3,25	1/1:13,0:14:6.49:157,6,0	1/1:13,1:16:12.03:217,12,0	0/1:11,1:11:20.08:80,0,20
chr10	9261747	.	TCTCTCTCTCTCTCACACACACACACACACACACACACA	T	4323.54	PASS	AB=1.000;AC=22;AF=0.458;AN=48;BaseQRankSum=6.081;DP=459;FS=3.947;HRun=0;HaplotypeScore=268.3693;InbreedingCoeff=0.1773;MQ=32.06;MQ0=79;MQRankSum=-2.729;QD=17.23;ReadPosRankSum=1.777;VQSLOD=3.3853;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:22:22.43:0,22,616	0/1:9,0:7:36.44:193,0,36	./.	./.	0/0:16,0:16:3.95:0,4,82	0/1:28,0:25:33.77:34,0,667	0/0:29,0:22:29.61:0,30,573	0/0:22,0:17:29.29:0,29,454	0/1:17,0:17:99:318,0,433	1/1:16,0:10:5.62:402,6,0	./.	1/1:11,0:9:4.53:368,5,0	0/0:9,0:9:5.97:0,6,241	0/1:17,0:15:99:220,0,221	1/1:15,0:12:3.42:166,3,0	0/0:23,0:17:25.36:0,25,1035	1/1:16,0:13:7.35:399,7,0	0/0:25,0:16:42.06:0,42,1405	0/1:11,0:7:5.27:438,0,5	0/1:12,0:11:0:0,0,0	0/0:22,0:16:0.47:0,0,1	./.	1/1:11,0:11:3.01:72,3,0	0/1:32,0:23:75.19:75,0,132	0/0:17,0:13:3.48:0,3,51	1/1:17,0:15:15.13:761,15,0	1/1:10,12:20:4.53:445,5,0	0/1:17,0:12:99:433,0,476
chr10	9261759	.	TCACACACACACACACACACACACACA	T	3798.84	PASS	AB=0.843;AC=22;AF=0.478;AN=46;BaseQRankSum=5.652;DP=440;FS=14.797;HRun=0;HaplotypeScore=185.8800;InbreedingCoeff=0.1410;MQ=32.43;MQ0=69;MQRankSum=-0.887;QD=17.19;ReadPosRankSum=2.487;VQSLOD=1.5993;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:21:9.09:0,9,84	1/1:6,1:6:2.96:200,3,0	./.	./.	0/0:15,0:15:0.47:0,0,1	0/1:21,0:25:99:125,0,173	0/0:26,0:21:3.01:0,3,61	0/0:21,0:15:17.91:0,18,385	1/1:11,0:14:6.02:391,6,0	1/1:13,4:12:8.85:428,9,0	1/1:5,3:6:2.96:19,3,0	1/1:7,5:11:5.36:370,5,0	0/0:7,0:7:4.26:0,4,128	0/1:12,5:15:56.26:145,0,56	0/1:10,4:14:99:157,0,102	0/0:18,0:17:14.04:0,14,484	1/1:11,4:13:4.86:334,5,0	0/1:22,0:14:85.62:86,0,395	1/1:12,3:12:0.11:399,0,0	./.	0/0:19,0:14:0.47:0,0,1	./.	./.	0/0:27,3:21:3.48:0,3,138	0/0:15,0:14:0.47:0,0,1	1/1:13,2:14:7.12:566,7,0	0/1:20,0:18:3.03:186,0,3	0/1:9,1:9:99:392,0,268
chr10	9263234	.	GAGAAAGGGA	G	91.92	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.627;DP=690;FS=4.879;HRun=0;HaplotypeScore=193.7262;InbreedingCoeff=0.6625;MQ=79.44;MQ0=3;MQRankSum=-1.974;QD=4.84;ReadPosRankSum=-2.381;VQSLOD=1.5408;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:51.18:0,51,2239	0/0:7,0:7:21.07:0,21,838	0/0:32,0:28:2.05:0,2,788	0/0:51,0:42:55.95:0,56,2078	0/0:34,0:34:96.30:0,96,4095	0/0:23,0:23:57.20:0,57,2666	0/0:26,0:26:69.24:0,69,2796	0/0:15,0:15:33.11:0,33,1475	0/0:23,0:23:60.21:0,60,2686	0/0:31,0:31:87.30:0,87,3742	0/0:22,0:22:57.20:0,57,2525	0/0:35,0:35:87.30:0,87,3573	0/0:28,0:28:75.26:0,75,2859	0/0:33,0:33:84.29:0,84,3640	0/0:29,0:29:75.26:0,75,3057	0/0:28,0:28:66.23:0,66,2711	0/0:24,0:24:7.01:0,7,2188	0/0:10,0:10:24.01:0,24,734	0/0:18,0:18:39.12:0,39,1231	0/0:27,0:27:69.24:0,69,2982	1/1:6,13:19:6.02:172,6,0	0/0:19,0:19:48.16:0,48,2145	0/0:18,0:18:45.15:0,45,1997	0/0:21,0:21:52.99:0,53,2148	0/0:31,0:30:75.26:0,75,3216	0/0:27,0:27:72.25:0,72,3006	0/0:23,0:22:57.20:0,57,2446	0/0:13,0:14:28.46:0,28,1451
chr10	9265834	.	GGATA	G	1152.36	PASS	AB=0.957;AC=21;AF=0.389;AN=54;BaseQRankSum=-2.973;DP=610;FS=10.154;HRun=0;HaplotypeScore=158.7124;InbreedingCoeff=-0.4400;MQ=32.04;MQ0=48;MQRankSum=0.284;QD=2.61;ReadPosRankSum=-2.294;VQSLOD=1.4480;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	1/1:8,0:7:1.36:13,1,0	0/0:9,0:2:2.98:0,3,22	0/0:21,0:3:8.96:0,9,72	0/0:32,0:27:2.99:0,3,23	0/1:10,10:17:7.54:19,0,8	1/1:15,0:7:5.91:37,6,0	0/1:40,0:22:42.64:189,0,43	0/0:14,0:13:11.73:0,12,70	0/1:44,2:38:99:282,0,454	0/1:24,3:26:29.24:108,0,29	0/1:16,0:12:57.44:57,0,125	0/1:18,0:16:61.91:62,0,112	0/1:12,0:11:24.11:24,0,38	0/0:32,0:28:3.42:0,3,276	0/1:16,0:15:22.02:122,0,22	0/1:10,0:9:5.21:5,0,107	0/0:13,0:10:2.96:0,3,39	0/1:16,0:10:15.90:16,0,34	0/1:41,0:40:68.76:69,0,131	0/0:15,0:10:11.10:0,11,141	0/1:31,0:26:13.88:14,0,131	0/1:35,1:29:87.18:87,0,141	0/1:12,2:13:33.66:34,0,37	0/1:24,3:23:18.83:45,0,19	0/1:40,0:33:76.97:77,0,318	0/0:24,0:20:17.86:0,18,144	0/1:9,0:9:40.12:40,0,87
chr10	9265838	.	AGATG	A	851.13	PASS	AB=0.975;AC=14;AF=0.259;AN=54;BaseQRankSum=-2.299;DP=617;FS=9.103;HRun=0;HaplotypeScore=160.8477;InbreedingCoeff=0.3249;MQ=32.18;MQ0=49;MQRankSum=-1.204;QD=3.75;ReadPosRankSum=0.826;VQSLOD=1.8360;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:5:2.04:0,2,6	0/0:8,0:7:6.82:0,7,42	0/0:16,0:2:3.01:0,3,44	0/0:25,0:5:12.51:0,13,177	0/0:6,28:29:2.50:0,2,9	./.	1/1:14,0:7:3.01:33,3,0	1/1:22,15:20:2.51:534,3,0	1/1:10,3:12:4.24:28,4,0	0/1:45,0:37:99:168,0,750	0/1:25,1:25:19.15:19,0,96	0/0:15,0:11:16.51:0,17,175	0/0:18,0:16:17.16:0,17,138	0/0:13,0:12:11.91:0,12,105	0/0:31,1:28:4.41:0,4,550	1/1:13,1:13:11.90:106,12,0	0/0:9,0:8:14.96:0,15,141	0/0:10,1:8:3.01:0,3,39	0/1:14,1:9:20.78:21,0,48	0/0:41,0:40:29.06:0,29,304	0/0:12,0:9:15.05:0,15,253	0/0:33,0:28:29.08:0,29,293	0/1:37,0:30:30.15:30,0,227	0/0:13,0:12:6.49:0,6,84	1/1:9,16:21:5.91:64,6,0	0/0:41,1:35:20.94:0,21,771	0/0:25,0:20:21.94:0,22,199	0/0:11,0:10:14.46:0,14,201
chr10	9265878	.	AGATG	A	1241.45	PASS	AB=0.830;AC=12;AF=0.222;AN=54;BaseQRankSum=-2.677;DP=579;FS=5.567;HRun=0;HaplotypeScore=156.3881;InbreedingCoeff=-0.1706;MQ=29.14;MQ0=55;MQRankSum=-3.247;QD=5.07;ReadPosRankSum=1.326;VQSLOD=2.5094;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:4:5:0,5,26	0/0:8,0:6:4.61:0,5,18	0/0:42,0:8:14.09:0,14,302	0/0:50,0:7:14.99:0,15,229	0/0:31,0:27:21.06:0,21,478	0/0:20,0:15:23.89:0,24,405	0/0:18,0:10:13.27:0,13,258	0/0:32,0:11:30.07:0,30,650	0/0:16,0:14:29.89:0,30,547	0/1:35,5:32:99:283,0,363	0/1:10,6:15:19.15:43,0,19	0/1:11,1:5:31.11:45,0,31	0/1:14,2:12:40.35:40,0,92	0/0:8,2:9:2.22:0,2,8	0/1:19,6:20:99:264,0,179	0/0:16,0:15:33.95:0,34,475	0/0:6,0:5:8.88:0,9,61	0/0:7,0:5:2.99:0,3,24	./.	0/1:22,5:27:36.07:36,0,50	0/0:22,0:20:26.25:0,26,563	0/1:19,7:24:58.46:70,0,58	0/1:20,9:27:91.70:120,0,92	1/1:8,0:8:2.96:57,3,0	0/0:22,0:21:21.97:0,22,291	0/1:29,7:31:99:300,0,462	0/0:18,2:17:17.43:0,17,125	0/1:8,2:9:72.21:128,0,72
chr10	9265902	.	AGATG	A	664.13	PASS	AB=0.997;AC=20;AF=0.370;AN=54;BaseQRankSum=-2.119;DP=606;FS=21.278;HRun=0;HaplotypeScore=172.8252;InbreedingCoeff=0.1038;MQ=28.53;MQ0=56;MQRankSum=-1.607;QD=2.06;ReadPosRankSum=1.115;VQSLOD=1.3635;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:8:9:0,9,44	1/1:4,5:8:2.79:33,3,0	0/0:31,0:6:2.97:0,3,20	./.	0/0:34,0:32:10.77:0,11,72	0/0:23,0:18:21.81:0,22,145	0/0:27,0:17:6.84:0,7,45	0/0:32,0:13:13.89:0,14,78	0/1:19,0:17:10.52:11,0,118	0/1:40,0:31:82.07:111,0,82	0/1:17,0:16:18.54:19,0,44	1/1:15,0:8:10.63:58,11,0	1/1:21,0:14:11.21:86,11,0	0/1:15,0:14:1:13,0,1	0/1:25,0:18:2.39:51,0,2	0/0:25,0:24:0.75:0,1,178	0/1:9,0:8:28.83:29,0,45	0/0:5,0:4:3.44:0,3,21	0/0:5,0:1:2.88:0,3,15	0/1:28,1:29:2.95:33,0,3	0/0:22,0:20:14.91:0,15,145	1/1:22,0:20:4.21:55,4,0	1/1:28,0:24:2.19:17,2,0	0/0:6,0:6:0.47:0,0,1	0/0:32,0:29:9.78:0,10,110	0/1:35,0:31:4.07:215,0,4	0/1:22,0:19:13.33:51,0,13	0/1:17,0:15:36.71:37,0,101
chr10	9265974	.	GGATA	G	297.85	PASS	AB=0.975;AC=12;AF=0.231;AN=52;BaseQRankSum=-0.225;DP=776;FS=4.211;HRun=0;HaplotypeScore=234.4885;InbreedingCoeff=0.1598;MQ=33.20;MQ0=69;MQRankSum=-3.708;QD=1.12;ReadPosRankSum=-2.772;VQSLOD=2.0223;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:14:1.35:4,1,0	0/0:15,0:14:6.42:0,6,201	./.	./.	0/0:40,0:32:8.61:0,9,196	0/1:30,0:24:3.28:3,0,95	1/1:32,0:18:2.65:19,3,0	0/1:23,5:12:40.27:40,0,105	1/1:27,0:23:11.76:280,12,0	0/0:35,0:27:19.73:0,20,783	0/0:25,0:22:26.69:0,27,440	0/0:31,0:24:38.31:0,38,584	0/0:28,0:22:1.96:0,2,319	0/0:31,0:28:15.82:0,16,448	0/0:36,0:31:45.25:0,45,558	0/1:34,0:33:48.79:49,0,113	0/0:20,0:17:8.83:0,9,309	0/1:20,0:16:11.33:11,0,79	0/0:19,0:9:19.41:0,19,267	0/0:41,0:37:3.94:0,4,226	0/0:34,0:31:10.85:0,11,433	0/0:26,0:18:8.35:0,8,145	0/0:25,0:23:23.11:0,23,416	0/0:16,0:16:15.52:0,16,246	0/1:45,0:41:21.65:22,0,208	0/0:43,0:33:7.40:0,7,552	0/1:25,0:23:0.57:1,0,219	0/0:15,0:15:5.89:0,6,370
chr10	9266074	.	GGATGGATA	G	488.68	PASS	AB=1.000;AC=23;AF=0.479;AN=48;BaseQRankSum=5.309;DP=351;FS=0.834;HRun=0;HaplotypeScore=86.6662;InbreedingCoeff=0.3979;MQ=34.66;MQ0=51;MQRankSum=-4.352;QD=2.42;ReadPosRankSum=1.335;VQSLOD=1.6891;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:13:23.91:0,24,382	1/1:3,0:2:1.82:5,2,0	./.	./.	0/0:10,0:9:15.03:0,15,198	0/0:2,0:1:3.01:0,3,52	0/0:11,0:7:15.04:0,15,227	./.	1/1:4,24:24:6.02:131,6,0	0/1:16,0:9:30.10:30,0,74	0/0:6,0:5:0:0,0,0	0/1:21,0:17:5.93:55,0,6	0/1:15,0:14:7.32:19,0,7	1/1:16,0:16:7.08:46,7,0	0/1:17,0:11:6.28:6,0,56	0/0:4,0:3:8.92:0,9,105	1/1:10,0:10:9.68:61,10,0	0/0:12,0:8:21.07:0,21,367	1/1:16,0:5:8.50:69,9,0	./.	0/0:23,0:18:27.60:0,28,234	1/1:6,0:3:3:25,3,0	1/1:13,0:7:2.65:17,3,0	0/0:10,0:10:3.01:0,3,35	0/0:13,0:12:29.86:0,30,315	1/1:18,0:14:13.57:95,14,0	0/1:13,0:12:8.91:9,0,12	1/1:10,0:10:9.88:80,10,0
chr10	9266082	.	AGATGGATGGATG	A	3753.79	PASS	AB=0.699;AC=28;AF=0.519;AN=54;BaseQRankSum=-0.837;DP=390;FS=0.623;HRun=0;HaplotypeScore=89.6006;InbreedingCoeff=0.5194;MQ=36.85;MQ0=49;MQRankSum=-3.612;QD=16.91;ReadPosRankSum=0.699;VQSLOD=1.9033;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:18:47.99:0,48,601	1/1:4,0:3:6.02:97,6,0	0/0:2,0:1:0:0,0,0	./.	0/0:11,0:10:20.91:0,21,262	0/0:4,0:2:3.90:0,4,79	0/0:12,0:8:18.01:0,18,194	0/0:22,0:1:3:0,3,28	0/0:28,0:24:8.21:0,8,43	1/1:17,0:10:21.01:276,21,0	1/1:8,0:7:3.01:50,3,0	1/1:18,2:16:27.94:739,28,0	0/1:4,12:15:4.96:85,0,5	0/1:2,14:16:9.87:165,0,10	1/1:8,8:10:3.01:72,3,0	0/0:7,0:6:15:0,15,204	1/1:11,0:11:29.42:478,29,0	0/0:14,0:10:26.99:0,27,355	0/1:10,8:6:8.93:344,0,9	1/1:1,21:21:2.96:19,3,0	0/0:29,0:25:33.24:0,33,386	1/1:9,0:6:9.02:130,9,0	1/1:11,1:7:9.50:157,10,0	1/1:11,0:11:5.12:60,5,0	0/0:15,0:14:36.02:0,36,448	1/1:17,0:13:0.11:504,0,0	0/1:14,0:13:1.86:162,0,2	1/1:11,0:11:17.93:416,18,0
chr10	9266102	.	AGATGGATGGATG	A	1556.65	PASS	AB=1.000;AC=20;AF=0.357;AN=56;BaseQRankSum=8.862;DP=490;FS=6.346;HRun=0;HaplotypeScore=136.5580;InbreedingCoeff=0.2282;MQ=42.47;MQ0=33;MQRankSum=-4.460;QD=6.92;ReadPosRankSum=6.229;VQSLOD=1.6702;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:25:69.12:0,69,1513	1/1:4,0:3:2.98:21,3,0	0/0:14,0:12:35.78:0,36,641	0/0:22,0:15:45.05:0,45,1001	0/0:14,0:13:27.09:0,27,593	0/0:6,0:4:12.04:0,12,279	0/0:19,0:15:33.02:0,33,684	0/0:29,0:17:51.17:0,51,1141	0/0:22,0:20:15.04:0,15,253	1/1:7,16:18:34.30:405,34,0	1/1:7,0:6:3.01:50,3,0	0/1:24,0:19:67.48:226,0,67	0/1:18,0:17:46.15:46,0,68	0/1:19,0:19:85.46:85,0,141	1/1:16,0:10:5.97:91,6,0	0/0:10,0:9:23.99:0,24,473	0/1:17,0:17:78.89:79,0,202	0/0:19,0:15:36.12:0,36,935	0/1:18,0:8:77.33:110,0,77	0/0:21,0:20:5.88:0,6,36	0/0:32,0:30:61.09:0,61,1430	0/0:10,0:9:0.41:0,0,135	1/1:11,0:7:9.97:160,10,0	1/1:12,0:12:8.81:87,9,0	0/0:18,0:18:48.14:0,48,1067	0/1:19,0:17:99:199,0,126	0/1:17,0:16:39.58:40,0,62	0/1:20,0:20:99:135,0,205
chr10	9266616	.	CA	C	21578.76	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=1.574;DP=737;FS=0.839;HRun=2;HaplotypeScore=116.6785;InbreedingCoeff=0.9790;MQ=96.69;MQ0=0;MQRankSum=-7.871;QD=35.03;ReadPosRankSum=4.895;VQSLOD=4.3941;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,41:42:99:1620,126,0	1/1:0,9:9:27.09:351,27,0	0/0:35,0:36:41.91:0,42,973	0/0:41,0:40:84.16:0,84,1111	1/1:1,12:13:36.07:448,36,0	1/1:1,21:22:51.17:662,51,0	1/1:0,21:21:60.20:779,60,0	1/1:2,35:37:99:1333,105,0	1/1:0,22:22:60.20:779,60,0	1/1:0,19:19:57.16:711,57,0	1/1:0,15:15:33.11:428,33,0	1/1:0,32:32:75.24:974,75,0	1/1:1,37:38:99:1360,105,0	1/1:1,27:28:72.23:935,72,0	1/1:1,36:37:99:1321,102,0	1/1:0,32:32:87.28:1129,87,0	1/1:1,29:30:81.26:1051,81,0	1/1:0,20:20:51.17:662,51,0	1/1:0,19:19:57.17:715,57,0	1/1:0,13:13:36.12:467,36,0	0/0:44,0:44:99:0,129,1825	1/1:1,19:20:57.17:725,57,0	1/1:0,17:17:45.15:584,45,0	1/1:0,36:36:93.30:1208,93,0	1/1:0,22:22:63.20:818,63,0	1/1:0,27:27:81.25:1039,81,0	1/1:0,41:41:99:1363,105,0	1/1:0,4:4:9.03:117,9,0
chr10	9267478	.	G	GAGA	12616.94	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-0.078;DP=824;FS=0.284;HRun=0;HaplotypeScore=123.2567;InbreedingCoeff=0.9949;MQ=73.37;MQ0=0;MQRankSum=-3.331;QD=42.91;ReadPosRankSum=1.371;VQSLOD=6.1162;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,129,2051	0/0:17,0:17:48.16:0,48,772	0/0:18,0:18:44.73:0,45,631	0/0:10,0:10:24.05:0,24,359	0/0:34,0:34:93.32:0,93,1490	0/0:31,0:31:93.30:0,93,1471	0/0:35,0:35:96.30:0,96,1496	0/0:45,0:45:99:0,108,1657	1/1:4,37:42:99:2277,108,0	1/1:3,0:30:87.29:1304,87,0	1/1:1,0:21:47.95:610,48,0	0/0:37,0:37:99:0,111,1780	0/0:37,0:37:99:0,102,1639	0/0:26,0:26:72.25:0,72,1157	1/1:2,0:40:96.24:1359,96,0	0/0:37,1:38:39.35:0,39,1573	0/0:24,0:24:66.21:0,66,1034	0/0:28,0:28:72.25:0,72,1157	1/1:3,20:24:66.23:1398,66,0	1/1:3,37:41:99:2110,99,0	1/1:4,41:45:99:2241,109,0	0/0:27,0:27:72.23:0,72,1126	1/1:2,0:26:48.03:645,48,0	1/1:1,0:25:45.15:673,45,0	0/0:27,0:27:72.25:0,72,1156	0/0:18,0:18:51.16:0,51,788	0/0:28,0:28:60.19:0,60,935	0/0:4,0:4:12.04:0,12,193
chr10	9267645	.	A	AT	3568.75	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=1.664;DP=686;FS=22.645;HRun=4;HaplotypeScore=109.6094;InbreedingCoeff=0.9528;MQ=89.17;MQ0=0;MQRankSum=-0.580;QD=33.04;ReadPosRankSum=-1.422;VQSLOD=1.4190;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,129,1463	0/0:15,0:15:42.12:0,42,476	0/0:26,0:26:61.97:0,62,673	0/0:27,0:27:62.80:0,63,689	0/0:20,0:20:54.15:0,54,611	0/0:20,0:20:57.16:0,57,646	0/0:23,0:23:63.16:0,63,703	0/0:35,0:35:93.26:0,93,1054	1/1:4,36:40:62.35:1238,62,0	0/0:19,0:19:48.13:0,48,544	0/0:14,0:14:33.09:0,33,374	0/0:24,0:24:57.16:0,57,645	0/0:24,0:24:60.15:0,60,669	0/0:23,0:23:69.20:0,69,782	0/0:48,0:48:99:0,135,1521	0/0:43,2:45:64.32:0,64,1116	0/0:30,0:30:81.19:0,81,904	0/0:17,0:17:45.12:0,45,505	1/1:3,20:23:60.17:794,60,0	1/1:1,12:13:33.11:451,33,0	1/1:1,31:32:81.23:1086,81,0	0/0:24,0:24:63.18:0,63,713	0/0:23,0:23:60.17:0,60,678	0/0:24,0:24:63.18:0,63,714	0/0:19,0:19:42.12:0,42,476	0/0:20,0:20:54.15:0,54,612	0/0:12,0:12:33.09:0,33,372	0/0:1,0:1:3.01:0,3,34
chr10	9270234	.	T	TAGACACAGACAC	15322.52	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-2.553;DP=734;FS=0.907;HRun=0;HaplotypeScore=238.3757;InbreedingCoeff=0.7501;MQ=59.20;MQ0=14;MQRankSum=2.610;QD=22.87;ReadPosRankSum=3.134;VQSLOD=3.9253;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:40,0:40:50.56:828,51,0	1/1:12,0:12:11.87:481,12,0	0/0:36,0:21:26.43:0,26,334	0/0:28,0:20:26.92:0,27,389	1/1:18,1:19:32.05:354,32,0	1/1:19,0:17:6.02:186,6,0	1/1:60,0:60:99:1475,100,0	1/1:30,0:26:37.56:590,38,0	1/1:23,0:22:11.60:485,12,0	1/1:30,0:30:69.08:1206,69,0	1/1:22,0:21:11.99:122,12,0	1/1:26,0:25:8.63:206,9,0	1/1:26,0:26:15.05:486,15,0	1/1:29,0:27:13.70:527,14,0	1/1:28,0:28:53.70:1069,54,0	1/1:28,2:28:43.95:879,44,0	1/1:18,0:18:23.99:366,24,0	1/1:4,6:11:9.03:461,9,0	1/1:18,0:17:41.72:598,42,0	1/1:24,0:24:31.83:365,32,0	1/1:42,0:41:54.12:775,54,0	1/1:24,0:24:2.35:42,2,0	1/1:27,1:28:35.24:687,35,0	1/1:25,1:26:19.16:378,19,0	1/1:26,1:27:10.10:231,10,0	1/1:29,0:29:63.22:1145,63,0	1/1:19,0:19:45.04:709,45,0	1/1:10,0:10:24.06:674,24,0
chr10	9270242	.	GAC	G	359	PASS	AB=0.966;AC=13;AF=0.241;AN=54;BaseQRankSum=-0.511;DP=752;FS=7.667;HRun=0;HaplotypeScore=208.1772;InbreedingCoeff=-0.2206;MQ=51.93;MQ0=17;MQRankSum=0.739;QD=1.15;ReadPosRankSum=-3.325;VQSLOD=0.8484;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,1:43:2.05:0,2,376	0/1:12,0:12:9.11:9,0,33	./.	0/0:29,0:16:5.87:0,6,39	0/1:18,2:21:28.66:29,0,248	0/0:17,0:15:5.99:0,6,67	0/1:55,3:58:24.33:24,0,475	0/0:26,1:23:21.06:0,21,273	0/0:23,0:22:6.44:0,6,53	0/1:29,2:31:35.87:36,0,613	0/0:21,0:20:12.04:0,12,183	0/1:25,0:24:1.55:2,0,21	0/1:25,0:27:49.19:52,0,49	0/1:29,0:27:7.92:8,0,55	0/0:27,1:28:17.47:0,17,327	0/0:31,1:30:1.02:0,1,453	1/1:17,2:19:2.99:25,3,0	0/1:10,0:10:23.96:24,0,50	0/0:20,0:19:23.78:0,24,214	0/0:31,0:30:17.43:0,17,233	0/0:47,0:45:23.07:0,23,213	0/0:27,0:27:8.74:0,9,70	0/1:28,0:28:35.14:35,0,356	0/0:27,0:27:17.57:0,18,233	0/0:28,0:28:8.58:0,9,179	0/1:33,0:33:99:226,0,105	0/1:16,3:19:28.69:29,0,95	0/0:10,0:10:5.72:0,6,87
chr10	9270244	.	C	CACAGACACAG	13310.91	PASS	AB=0.966;AC=34;AF=0.607;AN=56;BaseQRankSum=-4.751;DP=777;FS=17.245;HRun=0;HaplotypeScore=239.9869;InbreedingCoeff=-0.1231;MQ=51.47;MQ0=17;MQRankSum=0.972;QD=19.93;ReadPosRankSum=6.890;VQSLOD=2.2975;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:43,0:43:99:661,0,117	1/1:1,10:13:11.39:439,11,0	0/0:30,0:14:26.43:0,26,334	0/0:28,0:14:32.78:0,33,428	0/1:22,0:22:91.80:228,0,92	1/1:2,13:15:5.89:174,6,0	0/1:57,1:58:36.22:1104,0,36	0/1:26,0:22:99:520,0,159	1/1:2,22:23:12.13:622,12,0	0/1:34,0:34:99:824,0,151	0/0:20,0:19:7.43:0,7,61	1/1:3,23:29:9.02:269,9,0	1/1:3,22:32:15.52:636,16,0	1/1:5,20:31:16.72:688,17,0	0/1:27,1:28:53.73:789,0,54	0/1:30,2:30:99:598,0,191	1/1:17,1:19:23.99:400,24,0	0/1:10,0:10:30.68:137,0,31	0/1:20,0:19:8.77:306,0,9	0/1:31,0:30:53.40:285,0,53	0/1:46,0:44:66.12:665,0,66	0/0:5,18:31:1.37:0,1,4	0/1:28,0:28:99:347,0,112	0/1:28,0:28:66.07:240,0,66	0/1:12,13:28:60.68:142,0,61	1/1:5,22:36:85.94:1484,86,0	1/1:19,1:20:48.54:950,49,0	1/1:9,1:10:24.06:804,24,0
chr10	9270246	.	C	CAGACACAG	11173.88	PASS	AB=0.989;AC=32;AF=0.571;AN=56;BaseQRankSum=-4.883;DP=749;FS=38.011;HRun=0;HaplotypeScore=224.9357;InbreedingCoeff=-0.2062;MQ=49.68;MQ0=18;MQRankSum=-0.187;QD=17.30;ReadPosRankSum=6.557;VQSLOD=2.4545;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:38,1:40:99:625,0,190	1/1:12,0:12:9.12:297,9,0	0/0:30,0:13:32.39:0,32,399	0/0:29,0:14:35.85:0,36,479	0/1:21,0:21:99:200,0,183	0/1:14,0:12:5.05:106,0,5	0/1:59,0:59:99:1004,0,168	0/1:25,0:21:99:496,0,158	1/1:23,0:22:11.90:436,12,0	0/1:34,0:34:99:622,0,396	0/0:9,10:19:14.93:0,15,113	1/1:29,0:30:9.30:291,9,0	1/1:29,1:30:15.05:487,15,0	1/1:26,1:27:17.16:571,17,0	0/1:28,0:29:94.11:733,0,94	0/1:32,0:30:99:403,0,257	1/1:19,0:19:23.99:354,24,0	0/1:10,0:10:39.59:184,0,40	0/1:19,0:18:41.27:388,0,41	0/1:30,0:30:96.72:322,0,97	0/1:45,0:43:99:673,0,156	0/0:23,1:24:2.44:0,2,29	0/1:28,0:28:99:249,0,230	0/1:28,0:28:99:231,0,133	0/1:24,1:25:79.99:80,0,142	0/1:31,0:32:37.18:827,0,37	1/1:17,1:20:48.21:880,48,0	1/1:7,1:10:24.06:716,24,0
chr10	9270331	.	GGTGTGTGTGT	G	5233.17	PASS	AB=0.778;AC=19;AF=0.339;AN=56;BaseQRankSum=1.160;DP=641;FS=10.414;HRun=0;HaplotypeScore=217.8033;InbreedingCoeff=0.8762;MQ=51.16;MQ0=18;MQRankSum=-7.411;QD=30.78;ReadPosRankSum=2.181;VQSLOD=2.8982;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:37:42.10:0,42,1071	1/1:4,3:8:15.05:430,15,0	0/0:30,0:13:8.92:0,9,66	0/0:27,0:9:8.21:0,8,56	0/0:17,0:24:19.48:0,19,483	0/0:7,0:10:18.02:0,18,444	0/0:33,0:45:62.09:0,62,1662	0/0:26,0:23:16.75:0,17,336	1/1:8,2:8:8.98:178,9,0	0/0:12,0:23:45.15:0,45,1376	0/0:14,0:15:33.10:0,33,1070	0/1:14,4:21:9.41:406,0,9	1/1:12,5:20:23.87:602,24,0	1/1:14,6:21:21.05:543,21,0	0/0:14,0:24:29.12:0,29,829	0/0:9,0:28:18.06:0,18,694	1/1:10,7:18:15.05:379,15,0	0/0:12,0:14:18.06:0,18,480	0/0:10,0:10:15.05:0,15,438	0/0:10,0:23:27.09:0,27,1119	0/0:43,0:54:66.21:0,66,2476	1/1:10,10:23:48.05:1189,48,0	0/0:11,0:23:22.61:0,23,889	0/0:20,0:39:48.13:0,48,2008	0/0:11,0:12:18.06:0,18,523	1/1:16,4:20:29.14:546,29,0	1/1:7,13:20:13.66:620,14,0	1/1:2,5:8:12.04:340,12,0
chr10	9270483	.	ACTTCTGTAGG	A	12901.86	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=2.892;DP=580;FS=0.692;HRun=0;HaplotypeScore=162.0319;InbreedingCoeff=0.6311;MQ=78.34;MQ0=0;MQRankSum=-8.344;QD=24.81;ReadPosRankSum=7.813;VQSLOD=3.6977;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:13,22:36:9.03:275,9,0	1/1:4,7:11:11.97:293,12,0	0/0:24,0:24:36.05:0,36,725	0/0:36,0:36:61.28:0,61,1344	1/1:7,13:20:14.81:309,15,0	1/1:8,12:20:9.03:271,9,0	1/1:12,12:24:17.99:369,18,0	1/1:18,0:18:20.94:176,21,0	1/1:6,18:24:30.10:918,30,0	1/1:11,2:12:17.99:305,18,0	1/1:9,10:19:20.70:271,21,0	1/1:4,12:16:24.08:732,24,0	1/1:12,11:23:24.08:734,24,0	1/1:4,10:14:24.08:733,24,0	1/1:0,15:15:33.11:1010,33,0	1/1:4,16:20:42.14:1285,42,0	1/1:4,14:18:7.32:272,7,0	1/1:4,8:12:1.29:89,1,0	1/1:14,0:14:8.94:130,9,0	1/1:8,12:20:17.90:405,18,0	1/1:7,15:22:5.97:111,6,0	1/1:17,11:28:17.76:397,18,0	1/1:9,14:23:19.38:641,19,0	1/1:7,19:26:5.93:109,6,0	1/1:11,11:22:8.96:202,9,0	1/1:9,19:28:53.95:1032,54,0	1/1:3,25:28:57.20:1741,57,0	1/1:0,6:6:3.01:92,3,0
chr10	9272425	.	C	CAACA	8424.41	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-11.713;DP=663;FS=9.453;HRun=0;HaplotypeScore=100.7612;InbreedingCoeff=0.9896;MQ=66.96;MQ0=1;MQRankSum=1.847;QD=42.76;ReadPosRankSum=-1.161;VQSLOD=4.8443;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,23:30:61.45:1397,61,0	0/0:9,0:9:18.06:0,18,300	0/0:10,0:9:17.79:0,18,300	0/0:14,0:13:11.17:0,11,110	1/1:6,16:23:42.99:927,43,0	1/1:7,18:26:45.15:1110,45,0	1/1:8,22:32:60.21:1444,60,0	1/1:19,8:29:33.10:740,33,0	0/0:31,0:31:84.26:0,84,1341	0/0:31,0:31:72.21:0,72,1104	0/0:20,0:20:51.16:0,51,822	0/0:21,0:21:33.10:0,33,524	0/0:31,0:31:78.27:0,78,1296	0/0:24,0:24:66.23:0,66,1095	0/0:33,0:33:63.21:0,63,1049	1/1:5,14:19:39.13:943,39,0	0/0:22,0:22:45.15:0,45,749	1/1:5,15:21:39.13:942,39,0	0/0:23,0:23:51.16:0,51,825	0/0:22,0:22:54.17:0,54,873	0/0:26,0:26:60.19:0,60,973	0/0:32,0:32:90.29:0,90,1473	0/0:30,0:30:75.24:0,75,1224	0/0:20,0:20:51.17:0,51,849	1/1:2,14:16:39.13:922,39,0	0/0:28,0:28:69.24:0,69,1149	0/0:29,0:28:78.27:0,78,1299	0/0:10,0:10:18.06:0,18,300
chr10	9275030	.	TACAC	T	534.03	PASS	AB=0.913;AC=20;AF=0.455;AN=44;BaseQRankSum=0.613;DP=515;FS=0.000;HRun=0;HaplotypeScore=100.4299;InbreedingCoeff=0.1691;MQ=69.41;MQ0=8;MQRankSum=-1.069;QD=2.06;ReadPosRankSum=-0.183;VQSLOD=1.7302;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:31,0:31:3.47:27,3,0	./.	./.	./.	1/1:18,0:18:3:40,3,0	1/1:14,2:16:1.81:5,2,0	1/1:16,1:16:3.01:46,3,0	./.	0/0:16,0:20:9.05:0,9,37	0/1:17,1:19:17.12:42,0,17	0/1:17,1:18:50.73:51,0,64	0/0:12,0:15:8.50:0,8,80	0/0:13,0:15:2.74:0,3,12	0/0:9,0:10:2.74:0,3,12	0/1:19,4:23:16.59:97,0,17	1/1:9,7:16:9.03:138,9,0	0/0:19,0:19:3.83:0,4,20	0/1:21,0:21:4.38:4,0,18	./.	1/1:9,0:16:13.26:114,13,0	1/1:22,0:21:1.55:4,2,0	0/1:20,0:20:21.60:22,0,31	0/0:26,0:26:6.76:0,7,92	0/1:16,2:21:2.27:81,0,2	./.	0/0:12,0:12:8.39:0,8,126	0/0:22,0:19:8.70:0,9,56	0/0:10,0:9:2.99:0,3,24
chr10	9275533	.	CTTAA	C	15524.79	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=14.958;DP=754;FS=1.995;HRun=0;HaplotypeScore=196.4518;InbreedingCoeff=1.0000;MQ=85.79;MQ0=1;MQRankSum=-13.266;QD=35.61;ReadPosRankSum=0.264;VQSLOD=4.8163;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,45:49:99:1990,114,0	0/0:21,0:21:60.18:0,60,1475	0/0:34,0:34:93.26:0,93,1983	0/0:24,0:24:56.01:0,56,1275	1/1:4,26:30:69.23:1224,69,0	1/1:1,23:24:60.20:1098,60,0	1/1:3,23:26:57.19:1038,57,0	1/1:4,23:27:66.20:1170,66,0	0/0:14,0:14:39.13:0,39,1011	1/1:30,0:30:78.04:715,78,0	1/1:32,0:32:53.25:465,53,0	0/0:31,0:31:90.31:0,90,2344	0/0:25,0:25:75.26:0,75,1982	0/0:24,0:24:66.23:0,66,1761	1/1:31,0:31:74.75:671,75,0	1/1:0,31:31:83.95:1528,84,0	0/0:39,0:39:99:0,111,2919	1/1:1,20:20:48.16:879,48,0	1/1:1,18:19:54.17:975,54,0	1/1:3,19:22:54.14:965,54,0	1/1:3,23:26:57.19:1000,57,0	0/0:34,0:34:93.32:0,93,2449	1/1:24,0:24:53.14:464,53,0	1/1:23,0:23:40.87:361,41,0	1/1:0,21:21:57.19:982,57,0	0/0:33,0:33:65.35:0,65,2253	0/0:26,0:26:75.26:0,75,1971	0/0:13,0:13:36.12:0,36,930
chr10	9275535	.	TAATTAAAC	T	8630.89	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=1.290;DP=751;FS=1.757;HRun=0;HaplotypeScore=277.5587;InbreedingCoeff=0.9809;MQ=88.25;MQ0=1;MQRankSum=-13.392;QD=61.21;ReadPosRankSum=-1.210;VQSLOD=3.8808;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,110,962	0/0:21,0:21:60.18:0,60,2470	0/0:35,0:35:96.30:0,96,3423	0/0:28,0:28:60.16:0,60,2642	0/0:30,0:30:70.85:0,71,616	0/0:23,0:23:59.36:0,59,504	0/0:25,0:25:56.22:0,56,481	0/0:26,0:26:59.86:0,60,521	0/0:14,0:14:39.13:0,39,1606	1/1:0,28:28:81.28:2277,81,0	1/1:7,25:32:57.19:1548,57,0	0/0:34,0:34:99:0,99,4222	0/0:26,0:26:78.27:0,78,3332	0/0:23,0:23:66.23:0,66,2926	1/1:4,28:32:75.26:2124,75,0	0/0:31,0:31:82.71:0,83,694	0/0:40,0:40:99:0,114,4897	0/0:20,0:19:47.97:0,48,414	0/0:18,0:18:50.28:0,50,422	0/0:21,0:21:50.98:0,51,450	0/0:25,0:25:57.49:0,57,518	0/0:32,0:32:93.32:0,93,4115	1/1:4,22:26:54.19:1509,54,0	1/1:0,23:23:41.40:1173,41,0	0/0:21,0:21:54.79:0,55,437	0/0:31,1:32:7.25:0,7,3711	0/0:26,0:26:75.26:0,75,3231	0/0:13,0:13:36.12:0,36,1526
chr10	9275761	.	ACTGAGAAG	A	2156.15	PASS	AB=0.989;AC=17;AF=0.304;AN=56;BaseQRankSum=20.168;DP=628;FS=4.902;HRun=0;HaplotypeScore=248.2295;InbreedingCoeff=-0.3103;MQ=85.92;MQ0=0;MQRankSum=-17.777;QD=5.75;ReadPosRankSum=4.910;VQSLOD=2.0468;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:41,0:41:99:268,0,123	0/0:15,0:15:45.15:0,45,2083	0/0:31,0:31:82.94:0,83,3820	0/0:28,0:29:84.76:0,85,3311	0/1:17,2:19:58.86:59,0,156	0/1:13,0:13:67.21:67,0,127	0/1:26,0:26:99:156,0,108	0/1:39,3:42:99:357,0,314	0/0:26,0:26:78.27:0,78,3392	0/1:20,0:20:99:113,0,142	0/1:20,0:20:32.77:136,0,33	0/0:32,0:32:96.33:0,96,4136	0/0:14,0:14:42.14:0,42,1919	0/0:18,0:18:54.15:0,54,2134	0/1:26,0:26:11.92:180,0,12	0/1:21,0:21:40.90:136,0,41	0/0:21,0:21:63.19:0,63,2731	1/1:15,0:15:2.29:116,2,0	0/1:20,0:19:99:129,0,113	0/1:29,0:29:99:168,0,140	0/1:13,0:13:19.31:19,0,125	0/0:15,0:15:45.15:0,45,2083	0/1:22,0:22:23.39:155,0,23	0/1:20,0:20:81.51:82,0,83	0/1:28,0:28:99:175,0,115	0/0:31,0:31:93.32:0,93,4308	0/0:18,0:17:54.19:0,54,2396	0/0:3,0:3:9.03:0,9,345
chr10	9275763	.	TG	T	3904.42	PASS	AB=0.576;AC=22;AF=0.393;AN=56;BaseQRankSum=19.589;DP=622;FS=3.487;HRun=1;HaplotypeScore=159.5777;InbreedingCoeff=0.3099;MQ=86.83;MQ0=0;MQRankSum=-18.147;QD=10.73;ReadPosRankSum=4.783;VQSLOD=2.1026;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:8,33:41:12.51:411,0,13	0/0:15,0:15:45.15:0,45,720	0/0:33,0:33:99:0,99,1511	0/0:29,0:29:77.41:0,77,1168	0/1:4,14:18:36.49:93,0,36	0/1:3,9:13:39.22:120,0,39	0/1:5,20:25:2.25:251,0,2	0/1:11,29:40:38.95:418,0,39	0/0:26,0:26:78.26:0,78,1229	0/1:5,14:19:25.81:203,0,26	1/1:3,17:20:15.45:250,15,0	0/0:35,0:35:99:0,105,1638	0/0:15,0:15:45.15:0,45,715	0/0:17,0:17:51.17:0,51,808	1/1:2,23:25:49.31:356,49,0	1/1:4,17:21:13.50:252,13,0	0/0:20,0:20:60.19:0,60,935	1/1:2,13:15:38.56:237,39,0	1/1:0,15:17:44.33:292,44,0	0/1:5,24:29:2.25:299,0,2	0/1:6,7:13:40.87:49,0,41	0/0:16,0:16:48.16:0,48,765	1/1:1,20:21:26.38:300,26,0	0/1:6,12:18:26.36:116,0,26	0/1:7,21:28:13.78:258,0,14	0/0:31,0:31:93.32:0,93,1488	0/0:18,0:17:54.18:0,54,860	0/0:3,0:3:9.03:0,9,144
chr10	9275765	.	AGAAG	A	9619.51	PASS	AB=0.575;AC=23;AF=0.411;AN=56;BaseQRankSum=19.263;DP=621;FS=6.124;HRun=0;HaplotypeScore=172.8940;InbreedingCoeff=0.3925;MQ=87.99;MQ0=0;MQRankSum=-18.154;QD=26.72;ReadPosRankSum=4.338;VQSLOD=4.0808;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:8,33:41:3.15:1056,0,3	0/0:15,0:15:45.15:0,45,1304	0/0:33,0:33:97.21:0,97,2596	0/0:31,0:31:89.89:0,90,2283	0/1:4,14:18:29.04:288,0,29	0/1:4,9:13:43.91:309,0,44	0/1:4,20:24:9.10:644,0,9	0/1:10,29:39:0.48:1084,0,0	0/0:27,0:27:81.26:0,81,2154	0/1:4,14:18:18.03:496,0,18	1/1:3,17:20:13.57:603,14,0	0/0:34,0:34:99:0,102,2809	0/0:15,0:15:45.15:0,45,1304	0/0:17,0:17:51.17:0,51,1424	1/1:1,23:24:44.48:790,44,0	1/1:4,18:22:8.20:669,8,0	0/0:19,0:19:57.20:0,57,1652	1/1:2,13:15:39.13:509,39,0	1/1:3,15:17:42.14:564,42,0	0/1:4,24:28:16.87:760,0,17	0/1:5,7:12:36.90:133,0,37	0/0:16,0:16:48.16:0,48,1390	1/1:1,20:21:32.85:724,33,0	0/1:7,12:19:15.46:299,0,15	1/1:7,21:28:20.09:691,20,0	0/0:31,0:31:93.32:0,93,2696	0/0:20,0:19:60.21:0,60,1644	0/0:3,0:3:9:0,9,196
chr10	9276452	.	C	CTCAG	24579.43	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=15.903;DP=762;FS=1.271;HRun=0;HaplotypeScore=142.1682;InbreedingCoeff=0.9980;MQ=76.30;MQ0=0;MQRankSum=-8.975;QD=56.25;ReadPosRankSum=1.931;VQSLOD=6.4337;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,31:40:84.29:2206,84,0	0/0:12,0:12:36.12:0,36,649	0/0:33,0:32:81.28:0,81,1472	0/0:35,0:35:87.26:0,87,1540	1/1:5,14:20:35.96:949,36,0	1/1:3,14:18:48.16:1248,48,0	1/1:12,27:39:69.24:1815,69,0	1/1:12,22:35:72.23:1819,72,0	0/0:30,0:30:87.30:0,87,1601	1/1:4,16:21:51.18:1344,51,0	1/1:1,6:8:18.06:474,18,0	0/0:30,0:30:84.27:0,84,1514	0/0:37,0:37:99:0,105,1894	0/0:36,0:36:99:0,99,1750	1/1:5,26:31:66.23:1741,66,0	1/1:5,32:39:87.30:2277,87,0	0/0:29,0:29:81.23:0,81,1405	1/1:4,14:18:45.15:1187,45,0	1/1:6,18:24:57.18:1300,57,0	1/1:0,19:19:51.18:1344,51,0	1/1:8,41:50:99:2761,105,0	0/0:22,0:22:66.23:0,66,1212	1/1:6,10:16:23.87:632,24,0	1/1:7,31:38:77.02:2058,77,0	1/1:3,18:21:54.19:1424,54,0	0/0:28,0:28:81.27:0,81,1461	0/0:26,0:25:63.20:0,63,1123	0/0:7,0:7:21.07:0,21,386
chr10	9278231	.	T	TTAG	23205.04	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=-16.402;DP=802;FS=17.266;HRun=0;HaplotypeScore=104.9284;InbreedingCoeff=0.9990;MQ=83.19;MQ0=0;MQRankSum=-2.871;QD=49.37;ReadPosRankSum=2.579;VQSLOD=5.7299;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:11,44:55:99:2543,117,0	0/0:8,0:8:21.05:0,21,307	0/0:26,0:26:54.15:0,54,799	0/0:25,0:25:63.19:0,63,959	1/1:4,24:28:63.22:1350,63,0	1/1:0,23:24:66.23:1431,66,0	1/1:6,32:38:90.31:1955,90,0	1/1:9,25:34:87.28:1836,87,0	0/0:33,0:33:93.32:0,93,1458	1/1:3,28:32:87.30:1883,87,0	1/1:2,11:13:30.10:655,30,0	0/0:23,0:23:66.22:0,66,1026	0/0:46,0:46:99:0,126,1941	0/0:34,0:34:96.29:0,96,1475	1/1:5,40:46:99:2205,102,0	1/1:2,24:26:63.22:1377,63,0	0/0:34,0:34:90.31:0,90,1427	1/1:5,16:22:45.15:965,45,0	1/1:9,19:29:66.18:1373,66,0	1/1:4,24:29:60.21:1298,60,0	1/1:1,31:33:72.25:1562,72,0	0/0:29,0:29:81.28:0,81,1281	1/1:3,18:22:51.10:1101,51,0	1/1:4,23:29:54.18:1158,54,0	1/1:1,9:10:24.08:513,24,0	0/0:30,0:30:84.29:0,84,1329	0/0:33,0:33:93.30:0,93,1451	0/0:11,0:11:33.11:0,33,522
chr10	9279332	.	CA	C	1005.06	PASS	AB=0.737;AC=29;AF=0.518;AN=56;BaseQRankSum=7.372;DP=586;FS=6.343;HRun=17;HaplotypeScore=75.6616;InbreedingCoeff=0.2679;MQ=66.39;MQ0=6;MQRankSum=2.815;QD=2.51;ReadPosRankSum=7.218;VQSLOD=-0.6734;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:27,12:41:28.42:200,0,28	0/1:6,2:10:19.56:20,0,56	0/0:39,1:21:11.02:0,11,105	0/0:23,0:15:8.07:0,8,41	0/1:13,12:27:61.09:66,0,61	1/1:8,7:16:25.28:139,25,0	0/1:7,5:16:23.44:37,0,23	0/1:8,10:23:4.37:118,0,4	0/1:11,0:12:4.82:5,0,54	1/1:9,1:18:10.83:40,11,0	1/1:5,1:22:28.42:95,28,0	0/0:16,0:18:26.81:0,27,195	0/0:17,0:17:24.68:0,25,174	0/0:15,0:15:14.89:0,15,107	1/1:7,0:23:19.73:56,20,0	0/1:9,6:16:14.06:27,0,14	0/0:23,0:26:37.67:0,38,285	0/1:7,4:14:5.48:60,0,5	1/1:3,0:13:20.32:58,20,0	1/1:12,0:24:18.11:51,18,0	1/1:5,0:17:16.22:46,16,0	0/1:16,5:22:40.26:40,0,82	1/1:5,0:16:10.10:29,10,0	1/1:8,0:24:18.20:52,18,0	0/1:11,6:18:4.75:55,0,5	0/1:22,3:29:4.66:5,0,184	0/0:22,0:31:21.81:0,22,132	0/0:11,0:12:14.80:0,15,107
chr10	9279514	.	T	TC	9605.06	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=1.881;DP=743;FS=2.895;HRun=1;HaplotypeScore=95.4284;InbreedingCoeff=0.9948;MQ=73.09;MQ0=0;MQRankSum=-2.284;QD=41.58;ReadPosRankSum=-1.540;VQSLOD=4.4556;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,37:38:99:1605,108,0	0/0:10,0:10:30.10:0,30,389	0/0:18,0:18:51.16:0,51,651	0/0:23,0:23:66.21:0,66,854	1/1:0,38:38:99:1573,105,0	1/1:0,21:21:60.20:899,60,0	1/1:1,30:31:87.29:1303,87,0	1/1:2,24:26:78.24:1122,78,0	0/0:25,0:25:75.24:0,75,974	0/0:25,0:25:75.24:0,75,973	0/0:19,0:19:57.19:0,57,740	0/0:33,0:33:96.31:0,96,1246	0/0:34,0:34:99:0,102,1304	0/0:21,0:21:63.20:0,63,818	0/0:36,0:36:99:0,108,1360	1/1:0,26:26:69.23:1034,69,0	0/0:21,0:21:57.18:0,57,740	1/1:0,19:19:51.17:764,51,0	0/0:21,0:21:60.19:0,60,778	0/0:30,0:30:81.26:0,81,1050	0/0:29,0:29:87.27:0,87,1116	0/0:30,0:30:87.28:0,87,1129	0/0:34,0:34:99:0,102,1323	0/0:33,0:33:93.30:0,93,1205	1/1:1,31:32:87.29:1304,87,0	0/0:34,0:34:99:0,102,1325	0/0:32,0:32:90.29:0,90,1167	0/0:4,0:4:12.04:0,12,156
chr10	9279947	.	A	AG	4159.64	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-5.202;DP=779;FS=0.834;HRun=1;HaplotypeScore=85.8994;InbreedingCoeff=0.9992;MQ=87.56;MQ0=0;MQRankSum=0.060;QD=41.60;ReadPosRankSum=0.815;VQSLOD=3.8965;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,126,1602	0/0:12,0:12:33.10:0,33,416	0/0:27,0:27:72.14:0,72,869	0/0:26,0:26:68.38:0,68,824	0/0:28,0:28:81.26:0,81,1048	0/0:26,0:26:75.22:0,75,945	0/0:28,0:28:84.26:0,84,1071	0/0:29,0:29:87.26:0,87,1093	0/0:24,0:24:72.23:0,72,934	0/0:31,0:31:93.29:0,93,1187	0/0:41,0:41:99:0,117,1506	0/0:34,0:34:99:0,102,1311	0/0:31,0:31:87.19:0,87,1078	0/0:27,0:27:81.26:0,81,1051	0/0:34,0:34:99:0,102,1310	0/0:33,0:33:99:0,99,1258	0/0:34,0:34:99:0,99,1200	0/0:11,0:11:27.09:0,27,350	1/1:1,19:20:57.19:852,57,0	1/1:0,44:44:99:1825,123,0	1/1:1,35:36:99:1482,99,0	0/0:16,0:16:48.16:0,48,622	0/0:26,0:26:75.24:0,75,973	0/0:18,0:18:54.12:0,54,669	0/0:26,0:26:78.24:0,78,989	0/0:33,0:33:99:0,99,1249	0/0:32,0:32:96.31:0,96,1245	0/0:9,0:9:27.05:0,27,320
chr10	9280699	.	A	AC	5455.76	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-14.662;DP=649;FS=2.981;HRun=7;HaplotypeScore=60.0679;InbreedingCoeff=0.9941;MQ=83.51;MQ0=0;MQRankSum=-1.504;QD=26.61;ReadPosRankSum=1.795;VQSLOD=5.7026;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,28:31:78.24:942,78,0	0/0:11,0:11:33.05:0,33,319	0/0:23,0:23:53.89:0,54,483	0/0:18,0:18:45.02:0,45,423	1/1:3,29:32:78.24:940,78,0	1/1:2,27:29:69.21:830,69,0	1/1:5,19:24:22.28:551,22,0	1/1:6,21:27:54.14:628,54,0	0/0:19,0:19:48.03:0,48,455	0/0:20,0:20:48.06:0,48,458	0/0:22,0:22:57.09:0,57,549	0/0:27,0:27:66.10:0,66,637	0/0:24,0:24:63.09:0,63,608	0/0:20,0:20:48.07:0,48,462	0/0:35,0:35:99:0,102,985	1/1:4,30:34:55.17:949,55,0	0/0:32,0:32:87.14:0,87,840	1/1:1,5:6:12.04:145,12,0	0/0:15,0:15:30.04:0,30,290	0/0:27,0:27:75.12:0,75,724	0/0:17,0:17:47.81:0,48,446	0/0:22,0:22:54.08:0,54,521	0/0:19,0:19:54.09:0,54,521	0/0:24,0:24:66.04:0,66,622	1/1:5,17:22:39.12:471,39,0	0/0:33,0:33:84.13:0,84,811	0/0:24,0:24:69.11:0,69,666	0/0:12,0:12:30.04:0,30,290
chr10	9280863	.	CCTCTCT	C	176.92	PASS	AB=1.000;AC=12;AF=0.375;AN=32;BaseQRankSum=2.069;DP=552;FS=0.000;HRun=0;HaplotypeScore=104.9304;InbreedingCoeff=0.2101;MQ=76.49;MQ0=28;MQRankSum=-2.069;QD=1.20;ReadPosRankSum=0.722;VQSLOD=1.3267;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:24:3:0,3,35	./.	./.	0/0:75,0:28:0:0,0,0	1/1:11,0:12:3.01:42,3,0	0/1:23,0:22:0:0,0,0	0/0:19,0:19:0.89:0,1,2	0/0:30,0:30:1.36:0,1,3	0/0:11,0:11:2.97:0,3,20	0/1:21,0:21:5.10:5,0,55	./.	0/0:12,1:13:3.01:0,3,41	1/1:18,0:16:2.98:21,3,0	0/0:8,0:8:0:0,0,0	1/1:14,0:16:9.03:123,9,0	0/1:20,0:20:0:0,0,0	1/1:15,3:19:1.09:57,1,0	./.	./.	./.	./.	./.	./.	0/0:21,0:21:0.21:0,0,0	./.	./.	0/1:19,0:19:19.85:20,0,47	./.
chr10	9281000	.	AGTTTGTATGTGT	A	878.62	PASS	AB=0.950;AC=7;AF=0.125;AN=56;BaseQRankSum=7.473;DP=526;FS=18.481;HRun=0;HaplotypeScore=179.3576;InbreedingCoeff=-0.0335;MQ=68.98;MQ0=2;MQRankSum=-4.809;QD=6.66;ReadPosRankSum=-0.166;VQSLOD=1.7275;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:24:53.63:69,0,54	0/0:6,0:6:18.06:0,18,555	0/0:31,0:24:58.34:0,58,1084	0/0:26,0:24:52.07:0,52,966	0/0:23,0:23:27.14:0,27,155	0/1:12,10:22:49.53:95,0,50	0/1:22,0:21:50.34:50,0,71	0/0:19,0:19:15.97:0,16,59	0/0:12,0:12:32.12:0,32,924	0/0:16,0:16:47.50:0,47,859	0/0:18,0:18:38.94:0,39,614	0/0:14,0:14:35.37:0,35,855	0/0:12,0:12:24.08:0,24,676	0/0:18,0:18:41.35:0,41,1052	0/0:23,0:23:42.82:0,43,720	0/1:26,0:26:8.10:412,0,8	0/0:19,0:19:42.09:0,42,1035	0/1:13,0:13:4.13:4,0,7	0/0:10,0:10:27.08:0,27,512	0/0:14,0:14:38.79:0,39,711	0/0:22,0:22:66.08:0,66,1054	0/0:24,0:24:66.20:0,66,1671	0/0:21,0:22:20.72:0,21,758	0/0:26,0:26:45.03:0,45,719	0/1:21,0:21:9.93:350,0,10	0/0:16,0:16:48.16:0,48,1385	0/0:23,0:23:54.94:0,55,1738	0/1:4,0:4:25.10:25,0,179
chr10	9281003	.	TTGTATGTGTGTG	T	3085.24	PASS	AB=1.000;AC=18;AF=0.321;AN=56;BaseQRankSum=-0.169;DP=523;FS=0.439;HRun=0;HaplotypeScore=168.8581;InbreedingCoeff=0.8366;MQ=66.30;MQ0=2;MQRankSum=-1.721;QD=16.15;ReadPosRankSum=-1.563;VQSLOD=2.4774;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:24:50.52:469,51,0	0/0:6,0:6:18.03:0,18,494	0/0:29,0:22:43.25:0,43,493	0/0:21,0:19:44:0,44,439	1/1:23,0:23:44.51:351,45,0	1/1:20,0:20:26.96:293,27,0	1/1:22,0:21:47.98:496,48,0	1/1:17,0:17:50.57:406,51,0	0/0:13,0:13:29.02:0,29,854	0/0:15,0:17:44.47:0,44,480	0/0:17,0:18:28.34:0,28,333	0/0:14,0:14:34.99:0,35,669	0/0:12,0:12:30.04:0,30,732	0/0:19,0:19:36.90:0,37,840	0/0:26,0:26:40.42:0,40,354	1/1:2,22:25:14.89:485,15,0	0/0:19,0:19:41.83:0,42,854	1/1:14,0:14:38.73:298,39,0	0/0:10,0:10:26.72:0,27,301	0/0:15,0:15:33.01:0,33,446	0/0:22,0:22:50.84:0,51,542	0/0:25,0:25:63.04:0,63,1369	0/1:21,0:21:19.03:19,0,379	0/0:27,0:27:38.80:0,39,339	1/1:3,1:21:15.05:465,15,0	0/0:17,0:17:51.08:0,51,1154	0/0:21,0:22:59.58:0,60,1655	0/1:4,0:4:10.25:10,0,161
chr10	9281007	.	ATGTGTGTG	A	1417.05	PASS	AB=0.974;AC=18;AF=0.360;AN=50;BaseQRankSum=4.365;DP=537;FS=8.899;HRun=0;HaplotypeScore=142.4643;InbreedingCoeff=0.4849;MQ=63.54;MQ0=2;MQRankSum=-3.653;QD=6.65;ReadPosRankSum=0.971;VQSLOD=2.1516;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:25:1.35:51,1,0	0/0:6,0:6:8.92:0,9,227	./.	./.	0/0:22,0:22:3.01:0,3,31	1/1:21,0:21:3.01:47,3,0	0/1:23,0:22:13.01:13,0,22	0/0:17,0:17:1.25:0,1,3	0/0:12,0:13:16.91:0,17,481	0/1:17,1:18:99:131,0,122	1/1:15,3:18:3.01:73,3,0	0/0:13,0:14:15.05:0,15,382	0/0:11,0:15:15.05:0,15,396	0/0:10,0:20:12.04:0,12,392	1/1:15,11:26:21.07:509,21,0	1/1:25,0:25:0.56:209,1,0	0/0:14,0:24:16.19:0,16,399	0/0:13,0:13:2.92:0,3,17	./.	1/1:17,0:17:5.83:57,6,0	0/0:25,0:25:1.55:0,2,9	0/0:21,0:23:21.07:0,21,617	1/1:18,2:21:12.04:224,12,0	0/0:21,8:29:0:0,0,0	1/1:19,0:19:15.05:260,15,0	0/0:20,0:20:27.90:0,28,616	0/0:25,0:25:40.38:0,40,1047	0/0:4,0:4:3.01:0,3,105
chr10	9284310	.	TGCTGGCCA	T	10862.46	PASS	AB=0.950;AC=17;AF=0.304;AN=56;BaseQRankSum=15.747;DP=620;FS=48.221;HRun=0;HaplotypeScore=167.8359;InbreedingCoeff=0.9054;MQ=73.40;MQ0=0;MQRankSum=-14.801;QD=59.68;ReadPosRankSum=1.306;VQSLOD=2.6131;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:90.29:0,90,3711	0/0:14,0:14:39.13:0,39,1731	0/0:17,0:18:44.98:0,45,1244	0/0:14,0:14:31.11:0,31,938	0/0:18,0:18:45.15:0,45,1904	0/0:16,0:16:48.13:0,48,1745	0/0:26,0:26:78.25:0,78,3220	0/0:28,0:28:84.29:0,84,3490	0/0:37,0:37:99:0,105,4510	1/1:3,21:24:63.22:1726,63,0	1/1:0,19:19:48.16:1376,48,0	0/0:26,0:26:78.27:0,78,3234	0/0:37,0:37:99:0,105,4488	0/0:30,0:30:87.18:0,87,3661	1/1:0,31:31:75.26:2090,75,0	0/0:35,0:35:99:0,102,4271	0/0:24,0:24:66.23:0,66,2888	0/0:10,0:10:30.10:0,30,1257	1/1:4,11:15:33.10:850,33,0	1/1:0,33:33:93.32:2667,93,0	1/1:3,12:15:27.09:775,27,0	0/0:11,0:11:33.11:0,33,1282	1/1:0,17:17:39.13:1118,39,0	1/1:1,8:9:9.03:225,9,0	0/0:16,0:16:48.15:0,48,1856	0/1:18,1:19:34.95:35,0,1761	0/0:27,0:27:81.28:0,81,3437	0/0:16,0:16:48.16:0,48,2117
chr10	9284475	.	AACACAC	A	3609.34	PASS	AB=0.814;AC=31;AF=0.574;AN=54;BaseQRankSum=6.917;DP=836;FS=54.147;HRun=0;HaplotypeScore=175.9386;InbreedingCoeff=0.4892;MQ=51.77;MQ0=38;MQRankSum=-6.860;QD=7.73;ReadPosRankSum=-2.206;VQSLOD=0.9429;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:36,0:34:48.48:65,0,48	0/1:7,10:18:18.38:207,0,18	0/0:62,0:21:0:0,0,0	./.	1/1:32,0:28:3.06:45,3,0	1/1:27,0:25:10.72:119,11,0	1/1:23,0:21:14.68:185,15,0	1/1:42,0:38:9.41:197,9,0	1/1:11,13:26:11.87:317,12,0	0/0:28,0:30:37.13:0,37,905	0/0:14,0:19:15.03:0,15,258	0/0:15,0:33:13.05:0,13,156	1/1:15,9:26:26.90:426,27,0	1/1:11,13:26:17.91:307,18,0	0/0:23,0:25:30.32:0,30,686	1/1:35,0:31:15.94:191,16,0	1/1:14,13:27:11.90:224,12,0	0/1:16,0:14:12.25:113,0,12	0/0:12,0:15:18.14:0,18,180	0/1:18,0:24:15.44:15,0,376	0/0:24,0:49:29.38:0,29,384	1/1:15,7:23:7.01:38,7,0	0/0:28,0:28:39.11:0,39,961	0/0:30,0:33:48.13:0,48,1046	1/1:32,0:30:19.77:196,20,0	0/1:11,13:23:66.89:453,0,67	1/1:11,9:20:1.10:349,1,0	1/1:1,7:8:9.03:160,9,0
chr10	9284492	.	ACACACAC	A	5033.23	PASS	AB=0.903;AC=20;AF=0.357;AN=56;BaseQRankSum=11.132;DP=857;FS=3.219;HRun=0;HaplotypeScore=171.5755;InbreedingCoeff=0.3488;MQ=47.04;MQ0=59;MQRankSum=-9.432;QD=12.68;ReadPosRankSum=5.715;VQSLOD=3.8516;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:13,29:35:45.46:296,0,45	0/1:20,0:20:33.58:34,0,364	0/0:36,0:9:24.07:0,24,304	0/0:60,0:7:21.07:0,21,285	1/1:7,25:27:20.91:295,21,0	1/1:2,22:23:36.09:589,36,0	1/1:4,19:19:20.62:454,21,0	1/1:8,33:36:43.50:1275,44,0	0/0:33,0:32:0.52:0,1,614	0/0:35,0:35:99:0,102,2331	0/0:23,0:23:45.15:0,45,1013	0/0:36,0:36:66.94:0,67,1151	0/1:28,0:27:99:100,0,310	0/1:30,0:30:29.01:29,0,527	0/0:23,0:23:50.85:0,51,1352	1/1:6,32:33:38.49:693,38,0	0/1:30,0:30:12.43:12,0,186	0/1:9,12:15:46.85:387,0,47	0/0:15,0:14:42.13:0,42,704	0/0:32,0:32:77.03:0,77,1276	0/0:55,0:54:87.27:0,87,1472	0/0:19,0:19:30.38:0,30,451	0/0:30,0:29:69.23:0,69,1880	0/0:35,0:33:81.22:0,81,2162	1/1:4,27:28:45.11:791,45,0	0/0:27,0:26:21.60:0,22,662	0/1:22,0:22:32.24:32,0,384	0/1:9,0:9:26.77:44,0,27
chr10	9284498	.	AC	A	2333.65	PASS	AB=0.920;AC=14;AF=0.250;AN=56;BaseQRankSum=11.187;DP=856;FS=4.897;HRun=1;HaplotypeScore=128.7764;InbreedingCoeff=0.7882;MQ=47.58;MQ0=57;MQRankSum=-9.376;QD=9.05;ReadPosRankSum=2.280;VQSLOD=1.4840;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:39,4:35:14.45:239,14,0	0/0:20,0:20:33.46:0,33,419	0/0:33,0:10:30.10:0,30,377	0/0:51,1:8:24.08:0,24,303	1/1:32,1:27:21.23:231,21,0	1/1:25,0:23:33:399,33,0	1/1:23,1:20:17.61:163,18,0	0/1:42,0:36:99:448,0,181	0/0:39,0:38:74.97:0,75,890	0/0:33,0:33:92.50:0,92,1162	0/0:26,0:26:51.15:0,51,663	0/0:37,0:37:57.71:0,58,602	0/0:27,0:26:33.41:0,33,413	0/0:33,0:33:59.58:0,60,720	0/0:21,0:21:43.20:0,43,560	1/1:38,1:33:37.36:392,37,0	0/0:32,0:32:27.30:0,27,298	0/1:17,4:14:38.24:154,0,38	0/0:16,0:15:39.23:0,39,418	0/0:33,0:33:65.06:0,65,526	0/0:54,0:53:73.69:0,74,696	0/0:18,0:18:37.36:0,37,456	0/0:30,0:29:68.07:0,68,919	0/0:36,0:34:82.24:0,82,1094	1/1:31,0:28:41.98:498,42,0	0/0:27,0:26:66.85:0,67,725	0/0:22,0:22:34.50:0,35,403	0/0:9,0:9:6.96:0,7,74
chr10	9285371	.	GACACACACACACACAC	G	4727.97	PASS	AB=0.700;AC=17;AF=0.304;AN=56;BaseQRankSum=5.230;DP=590;FS=12.997;HRun=0;HaplotypeScore=244.3010;InbreedingCoeff=0.6355;MQ=60.80;MQ0=14;MQRankSum=-4.112;QD=22.09;ReadPosRankSum=1.238;VQSLOD=2.2128;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:40:29.36:0,29,602	0/0:7,0:11:12.04:0,12,593	0/0:34,0:17:2.97:0,3,20	0/0:36,0:17:2.94:0,3,18	0/0:7,0:25:16.34:0,16,236	0/0:5,0:15:16.87:0,17,104	0/0:15,0:16:11.15:0,11,250	0/0:18,0:17:15.05:0,15,262	0/0:10,0:17:25.90:0,26,1242	1/1:9,9:20:30.02:673,30,0	1/1:9,13:24:15.05:619,15,0	0/0:12,0:16:23.90:0,24,1067	0/0:7,0:16:24.06:0,24,933	0/0:12,0:20:21.04:0,21,1003	1/1:16,14:32:33.11:1410,33,0	0/1:13,0:26:0.93:1,0,362	0/0:14,0:19:18.06:0,18,971	0/1:8,0:18:99:112,0,121	1/1:11,6:18:20.71:585,21,0	1/1:11,10:22:7.08:754,7,0	0/0:10,5:16:0.47:0,0,1	0/0:15,0:26:27.08:0,27,1319	1/1:8,8:16:12.04:528,12,0	1/1:19,4:23:2.74:12,3,0	0/1:11,0:15:34.85:35,0,299	0/0:13,0:21:45.15:0,45,2239	0/0:11,0:19:29.94:0,30,1294	0/0:7,0:8:15.05:0,15,778
chr10	9286163	.	GGA	G	147.59	PASS	AB=0.930;AC=17;AF=0.447;AN=38;BaseQRankSum=2.278;DP=431;FS=14.534;HRun=0;HaplotypeScore=78.0556;InbreedingCoeff=0.1970;MQ=63.12;MQ0=12;MQRankSum=-1.089;QD=0.81;ReadPosRankSum=2.253;VQSLOD=0.4135;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:5.73:0,6,35	./.	./.	0/0:26,0:16:0:0,0,0	./.	1/1:10,0:9:2.68:11,3,0	0/1:23,0:24:0:0,0,0	./.	0/0:11,0:11:3.90:0,4,46	0/0:21,0:21:6.43:0,6,56	./.	1/1:17,3:20:6.01:64,6,0	0/1:17,0:16:14.04:24,0,14	1/1:17,5:21:8.81:77,9,0	0/1:22,2:23:19.92:20,0,79	0/1:15,0:16:4.98:5,0,22	0/1:18,0:20:18.03:34,0,18	1/1:10,0:10:3.73:16,4,0	./.	0/0:10,0:10:2.99:0,3,24	0/0:11,0:11:5.52:0,6,25	0/0:16,0:16:2.50:0,2,12	1/1:6,0:6:0.47:1,0,0	0/0:30,0:30:26.32:0,26,218	./.	./.	1/1:9,0:9:2.84:14,3,0	./.
chr10	9286243	.	AAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGG	A	3573.45	PASS	AB=1.000;AC=15;AF=0.278;AN=54;BaseQRankSum=3.498;DP=573;FS=1.824;HRun=0;HaplotypeScore=356.0082;InbreedingCoeff=0.5736;MQ=49.22;MQ0=27;MQRankSum=6.031;QD=20.90;ReadPosRankSum=0.857;VQSLOD=1.5055;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:24:30.09:0,30,769	0/0:7,0:6:15.04:0,15,298	1/1:18,0:5:0.88:2,1,0	./.	0/0:13,0:13:21.07:0,21,605	0/0:16,0:16:24.01:0,24,549	0/0:27,0:23:30.05:0,30,735	0/0:28,0:27:15.01:0,15,169	0/0:23,0:21:27.09:0,27,722	1/1:8,14:22:38.49:820,38,0	1/1:5,7:12:13.02:220,13,0	0/0:27,0:24:36.52:0,37,594	0/0:24,0:23:45.09:0,45,639	0/0:26,0:25:36.12:0,36,643	0/1:17,0:15:20.29:311,0,20	0/0:40,0:39:74.53:0,75,1624	0/0:20,0:10:9.03:0,9,225	0/0:18,0:13:21.02:0,21,504	1/1:13,12:22:33.66:797,34,0	1/1:3,8:11:11.99:191,12,0	0/1:38,0:20:36.77:713,0,37	0/0:20,0:21:32.59:0,33,597	1/1:1,6:7:0.40:48,0,0	0/1:21,0:18:99:472,0,100	0/0:13,0:13:33.10:0,33,756	0/0:28,0:25:3.74:0,4,1303	0/0:12,0:8:18.03:0,18,287	0/0:10,0:9:14.98:0,15,258
chr10	9286430	.	AGAAGGAAGGAAG	A	1683.72	PASS	AB=1.000;AC=25;AF=0.521;AN=48;BaseQRankSum=-0.219;DP=565;FS=23.232;HRun=0;HaplotypeScore=109.1476;InbreedingCoeff=0.3946;MQ=34.75;MQ0=69;MQRankSum=-0.836;QD=5.28;ReadPosRankSum=1.096;VQSLOD=0.3088;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:12:6.66:0,7,55	1/1:7,0:7:2.33:38,2,0	./.	./.	0/1:17,0:9:3.22:25,0,3	0/1:16,0:7:10.79:11,0,12	1/1:35,0:10:1.55:4,2,0	0/0:16,0:10:0.89:0,1,3	1/1:36,0:30:1.66:70,2,0	0/0:17,0:18:12.03:0,12,187	0/0:5,0:7:11.52:0,12,141	1/1:29,0:25:11.87:244,12,0	1/1:25,0:22:11.92:348,12,0	1/1:20,0:16:5.85:152,6,0	0/0:22,0:10:15.04:0,15,486	0/1:34,0:15:11.05:11,0,62	1/1:28,0:14:3.01:83,3,0	0/1:21,0:10:1.83:2,0,100	./.	0/0:7,0:6:1.91:0,2,11	0/0:50,0:26:20.70:0,21,148	1/1:11,11:19:11.90:96,12,0	0/0:15,0:13:24:0,24,434	0/0:16,0:12:15.03:0,15,221	0/1:10,0:8:32.91:220,0,33	1/1:11,0:8:6.02:188,6,0	1/1:8,0:6:12.04:350,12,0	./.
chr10	9290684	.	CAA	C	2903.82	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=9.525;DP=581;FS=5.277;HRun=16;HaplotypeScore=114.6042;InbreedingCoeff=0.9506;MQ=69.76;MQ0=8;MQRankSum=-2.126;QD=16.31;ReadPosRankSum=5.341;VQSLOD=2.6103;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,25:28:62.59:526,63,0	0/0:11,0:13:21.98:0,22,280	0/0:30,0:18:23.52:0,24,227	0/0:11,0:10:8.38:0,8,40	1/1:5,21:24:38.10:324,38,0	1/1:2,17:18:38.94:325,39,0	1/1:4,16:19:44.73:375,45,0	1/1:4,10:15:30.36:235,30,0	0/0:15,0:18:24.71:0,25,244	0/0:20,0:20:10.69:0,11,234	0/0:29,0:29:16.90:0,17,350	0/0:20,0:21:49.24:0,49,474	0/0:23,0:24:64.80:0,65,656	0/0:18,0:18:42.76:0,43,474	0/0:25,0:27:8.20:0,8,283	1/1:2,27:29:77.89:651,78,0	0/0:33,0:35:79.97:0,80,880	1/1:5,11:13:29.88:250,30,0	0/0:18,0:25:14.56:0,15,188	0/0:15,0:21:19.84:0,20,149	0/0:7,0:8:8.25:0,8,60	0/0:8,0:13:26.87:0,27,245	0/0:18,0:18:24.88:0,25,233	0/0:12,0:11:20.93:0,21,164	1/1:5,19:23:50.65:424,51,0	0/0:21,0:22:56.27:0,56,559	0/0:26,0:29:67.72:0,68,619	0/0:5,0:6:17.90:0,18,168
chr10	9290686	.	A	AAC	3730.50	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=6.677;DP=596;FS=8.831;HRun=0;HaplotypeScore=128.0527;InbreedingCoeff=0.9927;MQ=67.85;MQ0=8;MQRankSum=-0.589;QD=10.60;ReadPosRankSum=9.074;VQSLOD=1.6801;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:29:49.78:198,50,0	0/0:12,0:12:31.87:0,32,344	0/0:30,0:16:32.55:0,33,291	0/0:11,0:10:14.31:0,14,88	1/1:28,0:26:28.75:175,29,0	1/1:20,0:19:20.63:100,21,0	1/1:20,0:19:44.68:229,45,0	1/1:16,0:16:39.51:261,40,0	0/0:18,0:18:34.24:0,34,344	1/1:17,3:19:43.27:351,43,0	1/1:29,0:29:31.71:284,32,0	0/0:22,0:22:61.07:0,61,571	0/0:22,0:22:64.77:0,65,591	0/0:18,0:18:45.74:0,46,483	1/1:29,1:28:19.26:194,19,0	1/1:29,0:29:26.03:180,26,0	0/0:34,0:34:97.70:0,98,1027	1/1:17,0:14:22.94:76,23,0	1/1:25,0:25:38.66:472,39,0	1/1:23,0:23:34.39:474,34,0	1/1:8,0:8:23.39:235,23,0	0/0:12,0:12:31.04:0,31,265	1/1:18,1:19:37.10:221,37,0	1/1:14,0:13:19.98:104,20,0	1/1:24,0:23:34.63:176,35,0	0/0:26,0:26:65.21:0,65,653	0/0:32,0:32:82.15:0,82,730	0/0:6,0:6:17.84:0,18,167
chr10	9290687	.	A	AC	4823.68	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=5.523;DP=599;FS=12.573;HRun=0;HaplotypeScore=107.3355;InbreedingCoeff=0.9889;MQ=67.07;MQ0=9;MQRankSum=-1.755;QD=13.66;ReadPosRankSum=10.574;VQSLOD=3.9836;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:30,1:30:60.02:313,60,0	0/0:12,0:12:35.97:0,36,377	0/0:30,0:15:32.74:0,33,288	0/0:12,0:10:12.92:0,13,79	1/1:27,1:26:13.45:185,13,0	1/1:19,0:18:26.42:145,26,0	1/1:20,0:19:51.41:249,51,0	1/1:16,0:16:22.44:190,22,0	0/0:16,0:16:40.52:0,41,360	1/1:7,13:19:45.77:400,46,0	1/1:4,25:29:34.73:624,35,0	0/0:22,0:22:58.54:0,59,569	0/0:23,0:23:64.49:0,64,555	0/0:18,0:18:44.74:0,45,462	1/1:10,16:28:44.06:459,44,0	1/1:29,0:29:45.39:285,45,0	0/0:34,0:34:87.55:0,88,963	1/1:15,2:14:18.95:120,19,0	1/1:16,8:24:37.67:391,38,0	1/1:13,10:23:44.09:389,44,0	1/1:4,4:8:23.83:193,24,0	0/0:12,0:12:33.02:0,33,288	1/1:3,14:18:38.81:416,39,0	1/1:2,14:15:20.91:248,21,0	1/1:25,0:24:43.60:218,44,0	0/0:26,0:26:70.66:0,71,721	0/0:32,0:32:88.08:0,88,769	0/0:9,0:9:15.87:0,16,157
chr10	9290689	.	A	AAC	480.19	PASS	AB=0.780;AC=4;AF=0.071;AN=56;BaseQRankSum=1.400;DP=601;FS=3.057;HRun=0;HaplotypeScore=134.4059;InbreedingCoeff=0.4738;MQ=66.14;MQ0=9;MQRankSum=-0.837;QD=8.57;ReadPosRankSum=1.112;VQSLOD=3.6148;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:72.06:0,72,549	0/0:12,0:12:32.38:0,32,352	0/0:29,0:14:25.36:0,25,265	0/0:13,0:10:19.87:0,20,143	0/0:28,0:26:67.02:0,67,490	0/0:18,0:17:39.01:0,39,296	0/0:18,0:17:50:0,50,348	0/0:15,0:15:32.42:0,32,227	0/0:16,0:16:31.36:0,31,319	0/0:20,0:19:52.33:0,52,404	0/0:28,0:28:74.77:0,75,648	0/0:23,0:23:57.64:0,58,565	0/0:25,0:25:68.24:0,68,647	0/0:19,0:19:46.28:0,46,499	0/0:30,0:28:47.58:0,48,445	0/0:30,0:30:75.51:0,76,588	0/0:34,0:34:97.82:0,98,1077	0/0:18,0:15:37.20:0,37,267	0/1:20,5:25:99:167,0,113	0/1:15,9:24:6.03:314,0,6	1/1:4,3:7:7.18:106,7,0	0/0:12,0:12:32.82:0,33,301	0/0:19,0:19:42.45:0,42,382	0/0:15,0:14:27.01:0,27,246	0/0:25,0:24:59.63:0,60,440	0/0:28,0:28:77.56:0,78,798	0/0:31,0:31:82.12:0,82,739	0/0:9,0:9:26.86:0,27,249
chr10	9290956	.	T	TTGTTCA	17200.81	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-1.329;DP=706;FS=2.832;HRun=0;HaplotypeScore=139.4794;InbreedingCoeff=0.9971;MQ=86.47;MQ0=1;MQRankSum=-17.897;QD=76.11;ReadPosRankSum=-2.282;VQSLOD=4.9047;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,36:45:90.31:3197,90,0	0/0:12,0:12:30.10:0,30,688	0/0:30,0:30:83.06:0,83,1577	0/0:24,0:25:55.68:0,56,1079	1/1:2,33:37:69.15:2215,69,0	1/1:2,17:20:36.12:1226,36,0	1/1:8,20:28:60.21:2064,60,0	1/1:13,23:36:96.31:3077,96,0	0/0:18,0:18:51.16:0,51,1119	0/0:25,0:25:72.24:0,72,1617	0/0:24,0:24:63.18:0,63,1348	0/0:20,0:20:60.19:0,60,1349	0/0:22,0:22:63.15:0,63,1370	0/0:26,0:26:78.27:0,78,1780	0/0:27,0:27:78.25:0,78,1753	1/1:3,21:25:69.24:2439,69,0	0/0:29,0:29:81.25:0,81,1866	1/1:2,8:10:30.10:1067,30,0	0/0:30,0:30:84.23:0,84,1765	0/0:39,0:39:99:0,117,2465	0/0:23,0:22:60.19:0,60,1372	0/0:28,0:28:84.19:0,84,1860	0/0:16,0:16:45.15:0,45,1064	0/0:20,0:20:57.18:0,57,1255	1/1:2,22:25:54.19:1917,54,0	0/0:24,0:24:60.21:0,60,1398	0/0:37,0:36:99:0,102,2321	0/0:5,0:5:15.03:0,15,307
chr10	9291765	.	T	TCACACACACACACACA	9569.74	PASS	AB=0.656;AC=15;AF=0.268;AN=56;BaseQRankSum=-4.412;DP=841;FS=7.997;HRun=0;HaplotypeScore=382.6817;InbreedingCoeff=0.8069;MQ=63.62;MQ0=3;MQRankSum=-10.308;QD=38.74;ReadPosRankSum=-4.280;VQSLOD=1.5849;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:28,7:37:10.51:660,11,0	0/0:13,0:13:36.12:0,36,1555	0/0:37,0:23:35.75:0,36,979	0/0:32,0:24:40.12:0,40,1361	1/1:22,9:35:0.55:164,1,0	1/1:16,6:22:17.18:1126,17,0	1/1:32,2:35:23.98:741,24,0	1/1:37,0:35:57.18:2090,57,0	0/0:31,0:31:72.25:0,72,3046	0/0:31,0:31:42.08:0,42,2336	0/0:30,0:30:65.73:0,66,2423	0/0:33,0:33:81.28:0,81,3375	0/0:30,0:30:75.26:0,75,3034	0/0:37,0:37:84.28:0,84,3314	0/0:55,0:55:58.64:0,59,4279	0/1:20,14:42:80.58:3293,0,81	0/0:28,0:28:78.25:0,78,2931	1/1:10,5:14:27.05:1364,27,0	0/0:18,0:17:33.58:0,34,847	0/0:30,0:30:84.27:0,84,2961	0/0:39,0:39:56.80:0,57,3100	0/0:26,0:26:72.25:0,72,2933	0/0:22,0:22:51.13:0,51,1575	0/0:28,0:28:69.16:0,69,2256	1/1:12,6:22:1.74:131,2,0	0/0:38,0:39:96.31:0,96,3959	0/0:31,0:31:84.29:0,84,3669	0/0:4,0:4:12.04:0,12,538
chr10	9292134	.	TC	T	6557.28	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=0.860;DP=548;FS=13.584;HRun=1;HaplotypeScore=62.6041;InbreedingCoeff=0.9993;MQ=75.60;MQ0=0;MQRankSum=-2.200;QD=37.47;ReadPosRankSum=0.964;VQSLOD=3.9471;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:66.23:0,66,1051	1/1:0,8:8:24.08:335,24,0	0/0:19,0:19:57.19:0,57,888	0/0:13,0:13:39.13:0,39,606	0/0:30,0:30:90.31:0,90,1436	0/0:28,0:28:84.23:0,84,1270	0/0:13,0:13:39.12:0,39,600	0/0:24,0:24:72.22:0,72,1107	1/1:1,22:23:52.09:751,52,0	0/0:34,0:34:99:0,102,1589	0/0:27,0:27:81.28:0,81,1290	1/1:0,23:23:60.20:839,60,0	1/1:0,19:19:51.17:711,51,0	1/1:0,12:12:36.12:503,36,0	0/0:27,0:27:81.26:0,81,1271	0/0:12,0:12:36.09:0,36,527	1/1:0,17:17:42.14:587,42,0	0/0:20,0:20:60.17:0,60,927	0/0:18,0:18:51.15:0,51,755	0/0:29,0:28:84.29:0,84,1337	0/0:15,0:15:45.15:0,45,719	1/1:0,15:15:45.11:607,45,0	0/0:15,0:15:45.15:0,45,718	0/0:8,0:8:24.08:0,24,383	0/0:19,0:19:57.17:0,57,886	1/1:0,23:23:69.23:965,69,0	1/1:0,19:19:51.17:713,51,0	1/1:0,16:16:39.13:545,39,0
chr10	9293999	.	AT	A	6422.27	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=11.450;DP=581;FS=8.751;HRun=1;HaplotypeScore=57.4526;InbreedingCoeff=0.9932;MQ=80.01;MQ0=0;MQRankSum=-0.358;QD=34.90;ReadPosRankSum=1.375;VQSLOD=4.3722;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,31:31:75.25:1043,75,0	0/0:5,0:5:15.05:0,15,209	0/0:17,0:17:48.10:0,48,589	0/0:13,1:14:13.87:0,14,303	1/1:1,23:24:68.99:851,69,0	1/1:0,22:22:51.16:710,51,0	1/1:0,17:17:45.15:625,45,0	1/1:1,21:22:66.09:842,66,0	0/0:19,0:19:57.19:0,57,793	0/0:22,0:22:63.18:0,63,834	0/0:25,0:25:75.22:0,75,1012	0/0:25,0:25:54.70:0,55,967	0/0:16,0:16:48.15:0,48,652	0/0:24,0:24:69.19:0,69,920	0/0:20,0:20:60.14:0,60,768	1/1:0,16:16:36.12:501,36,0	0/0:35,0:35:99:0,105,1352	1/1:5,23:28:81.65:1055,82,0	0/0:16,0:16:47.93:0,48,572	0/0:19,0:19:57.16:0,57,761	0/0:14,0:14:36.05:0,36,448	0/0:18,0:18:54.08:0,54,710	0/0:27,0:27:81.15:0,81,1069	0/0:20,0:20:60.15:0,60,782	1/1:0,24:24:57.19:795,57,0	0/0:27,0:27:81.26:0,81,1116	0/0:27,0:25:81.08:0,81,990	0/0:7,0:7:21.07:0,21,292
chr10	9295239	.	C	CAG	8465.29	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-3.576;DP=757;FS=5.046;HRun=0;HaplotypeScore=102.0442;InbreedingCoeff=0.9886;MQ=58.16;MQ0=10;MQRankSum=-2.771;QD=33.20;ReadPosRankSum=-0.909;VQSLOD=6.3047;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,35:39:71.36:1231,71,0	0/0:12,0:12:30.10:0,30,398	0/0:33,0:13:33.10:0,33,415	0/0:36,0:14:10.04:0,10,52	1/1:4,24:27:60.21:1031,60,0	1/1:7,37:44:94.93:1687,95,0	1/1:6,15:21:33.11:555,33,0	1/1:8,23:27:60.17:919,60,0	0/0:18,0:18:45.09:0,45,563	0/0:37,0:37:93.29:0,93,1210	0/0:30,0:30:81.25:0,81,1061	0/0:20,0:20:49.71:0,50,631	0/0:23,0:23:63.19:0,63,822	0/0:19,0:19:54.18:0,54,715	0/0:29,0:29:84.26:0,84,1102	1/1:6,20:26:14.24:842,14,0	0/0:28,0:28:72.18:0,72,894	1/1:6,17:22:44.12:890,44,0	0/0:13,0:10:27.09:0,27,359	0/0:28,0:28:69.23:0,69,915	0/0:20,0:20:60.18:0,60,772	0/0:31,0:31:81.21:0,81,1027	0/0:30,0:30:72.24:0,72,954	0/0:29,0:29:72.48:0,72,922	1/1:6,34:40:77.64:1310,78,0	0/0:25,0:25:66.21:0,66,865	0/0:23,0:23:57.17:0,57,741	0/0:18,0:18:41.85:0,42,513
chr10	9298231	.	C	CA	7137.15	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-14.712;DP=563;FS=2.962;HRun=0;HaplotypeScore=51.5278;InbreedingCoeff=0.9996;MQ=84.04;MQ0=0;MQRankSum=-1.447;QD=39.87;ReadPosRankSum=2.705;VQSLOD=5.3292;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,43:44:99:1513,99,0	0/0:11,0:11:33.11:0,33,461	0/0:15,0:15:42.13:0,42,563	0/0:22,0:22:56.96:0,57,609	1/1:0,31:31:84.22:1257,84,0	1/1:0,20:20:57.19:872,57,0	1/1:0,19:19:48.16:735,48,0	1/1:1,27:28:81.23:1153,81,0	0/0:19,0:19:57.17:0,57,760	0/0:26,0:26:78.25:0,78,1074	0/0:15,0:15:45.13:0,45,595	0/0:15,0:15:45.15:0,45,628	0/0:13,0:13:39.12:0,39,530	0/0:10,0:10:30.08:0,30,388	0/0:26,0:26:77.93:0,78,985	1/1:0,14:14:36.12:551,36,0	0/0:24,0:24:72.24:0,72,1006	1/1:0,9:9:27.09:413,27,0	0/0:13,0:13:36.10:0,36,470	0/0:26,0:26:75.23:0,75,1014	0/0:17,0:17:50.35:0,50,643	0/0:28,0:28:84.24:0,84,1136	0/0:18,0:18:54.17:0,54,737	0/0:20,0:20:60.19:0,60,822	1/1:0,14:14:42.14:643,42,0	0/0:28,0:28:84.20:0,84,1135	0/0:26,0:26:78.25:0,78,1073	0/0:12,0:12:36.12:0,36,503
chr10	9303001	.	CTCTCTCTCTCTCTCTCTCCTG	C	1131.31	PASS	AB=0.947;AC=16;AF=0.286;AN=56;BaseQRankSum=4.472;DP=450;FS=25.080;HRun=0;HaplotypeScore=196.7134;InbreedingCoeff=-0.1160;MQ=36.95;MQ0=38;MQRankSum=-1.656;QD=6.05;ReadPosRankSum=1.200;VQSLOD=0.9564;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:10:11.18:0,11,69	0/0:10,0:7:7.27:0,7,98	0/0:22,0:3:8.82:0,9,118	0/0:44,0:6:12.04:0,12,199	0/0:13,2:12:3.79:0,4,44	0/1:17,1:17:16.57:36,0,17	0/1:14,0:11:6.92:137,0,7	0/1:24,0:20:62.45:106,0,62	0/1:14,0:13:2.08:2,0,73	0/0:23,0:22:64.45:0,64,2077	0/0:13,0:12:8.22:0,8,248	1/1:9,0:8:6.79:182,7,0	0/1:11,0:11:43.67:209,0,44	1/1:8,0:6:2.27:100,2,0	0/0:27,0:27:60.11:0,60,2082	0/1:12,2:13:34.52:48,0,35	0/1:11,0:9:3.61:4,0,132	0/1:7,1:8:31.85:156,0,32	0/0:13,0:12:33.11:0,33,1178	0/0:13,0:12:21.53:0,22,876	0/0:20,0:14:30.08:0,30,1648	0/0:11,0:11:2.60:0,3,41	0/0:20,0:19:32.71:0,33,1282	0/0:20,0:18:35.74:0,36,1762	0/1:15,6:20:16.42:36,0,16	0/1:18,0:16:99:130,0,294	0/1:12,0:9:76.87:90,0,77	0/1:3,0:3:38.28:48,0,38
chr10	9303020	.	CTG	C	701.52	PASS	AB=0.895;AC=10;AF=0.179;AN=56;BaseQRankSum=1.201;DP=559;FS=1.349;HRun=0;HaplotypeScore=163.8689;InbreedingCoeff=0.2704;MQ=38.66;MQ0=31;MQRankSum=-4.528;QD=4.41;ReadPosRankSum=-0.746;VQSLOD=2.8024;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:18,2:20:18.57:19,0,27	0/0:11,0:8:6:0,6,52	0/0:44,0:8:18.51:0,19,250	0/0:61,0:17:26.94:0,27,454	0/0:16,2:17:7.83:0,8,35	0/1:19,3:21:2.08:29,0,2	0/1:11,4:13:1.80:81,0,2	0/1:28,4:30:53.81:471,0,54	0/0:18,0:17:8.81:0,9,65	0/0:25,0:24:60.25:0,60,851	0/0:16,0:15:21.07:0,21,336	0/0:12,0:11:0.72:0,1,2	0/1:18,0:18:7.52:8,0,80	0/0:9,0:7:2.49:0,2,12	0/0:22,0:22:30.51:0,31,526	0/1:16,2:17:7.50:48,0,8	0/0:13,0:11:3.01:0,3,34	1/1:4,3:7:13.59:149,14,0	0/0:16,0:15:27.08:0,27,389	0/0:11,0:10:24.08:0,24,389	0/0:19,0:15:26.37:0,26,387	0/0:17,0:17:8.96:0,9,51	0/0:16,0:15:27.09:0,27,398	0/0:28,0:26:41.17:0,41,603	1/1:26,1:26:1.68:37,2,0	0/0:21,0:20:36.47:0,36,388	0/0:19,0:17:22.79:0,23,229	0/0:3,0:3:6.02:0,6,80
chr10	9303027	.	T	TGTGTGAGA	3604.56	PASS	AB=1.000;AC=27;AF=0.482;AN=56;BaseQRankSum=3.783;DP=622;FS=22.516;HRun=0;HaplotypeScore=218.2303;InbreedingCoeff=0.3557;MQ=39.55;MQ0=32;MQRankSum=-3.907;QD=10.96;ReadPosRankSum=-5.074;VQSLOD=-0.0419;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:17,5:23:13.60:704,14,0	1/1:11,0:8:5.67:135,6,0	0/0:50,0:12:30.96:0,31,585	0/0:64,0:20:43.66:0,44,861	1/1:24,0:22:2.99:11,3,0	1/1:20,3:22:11.31:336,11,0	1/1:15,2:22:10.10:195,10,0	0/1:38,0:36:43.63:499,0,44	0/1:20,0:19:53.75:54,0,97	0/0:30,0:28:68.85:0,69,1210	0/0:17,0:15:21.06:0,21,295	0/0:12,0:11:4.26:0,4,41	0/1:19,0:19:99:213,0,203	1/1:9,0:7:1.86:5,2,0	0/0:24,0:24:29.28:0,29,536	1/1:13,7:20:17.95:453,18,0	0/1:16,0:13:44.93:113,0,45	1/1:7,0:11:9.25:182,9,0	0/0:17,0:16:33.10:0,33,532	0/0:12,0:12:24.08:0,24,479	0/0:19,0:16:30.10:0,30,613	1/1:18,0:18:2.61:52,3,0	0/0:17,0:16:25.98:0,26,448	0/0:31,0:29:37.10:0,37,621	1/1:25,3:28:9.52:385,10,0	0/1:23,0:22:99:119,0,450	0/1:17,0:15:91.36:91,0,214	0/1:3,0:3:57.48:59,0,57
chr10	9303035	.	A	AGTGTGTGTGTGT	4204.23	PASS	AB=0.990;AC=35;AF=0.625;AN=56;BaseQRankSum=1.284;DP=664;FS=24.743;HRun=0;HaplotypeScore=244.3366;InbreedingCoeff=0.6695;MQ=41.43;MQ0=32;MQRankSum=-4.763;QD=9.75;ReadPosRankSum=-5.670;VQSLOD=-0.4262;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:25:27.02:562,27,0	1/1:9,2:8:5.76:352,6,0	0/1:55,0:13:14.63:15,0,368	0/0:66,0:22:15.22:0,15,677	1/1:25,0:23:5.64:47,6,0	1/1:23,0:22:14.49:267,14,0	1/1:23,0:21:9.70:138,10,0	1/1:38,0:36:40.99:433,41,0	1/1:22,1:22:23.48:387,23,0	0/0:31,0:30:60.58:0,61,846	0/0:15,0:13:21.50:0,22,248	1/1:12,0:12:5.55:40,6,0	1/1:23,0:23:31.02:440,31,0	1/1:5,9:16:2.30:19,2,0	0/0:22,0:22:32.89:0,33,419	1/1:26,0:25:26.68:347,27,0	1/1:16,0:13:4.89:31,5,0	1/1:14,0:14:11.65:205,12,0	0/0:17,0:14:30.01:0,30,341	0/0:13,0:13:27.06:0,27,464	0/0:21,0:18:28.09:0,28,493	1/1:18,0:20:4.89:94,5,0	0/0:16,0:16:30.19:0,30,323	0/0:32,0:30:41.66:0,42,451	0/1:30,0:30:4.75:301,0,5	1/1:23,0:23:18.77:288,19,0	1/1:17,1:17:21.55:188,22,0	0/1:5,0:5:13.99:53,0,14
chr10	9303037	.	A	AGTGT	5248.56	PASS	AB=0.757;AC=49;AF=0.875;AN=56;BaseQRankSum=0.407;DP=674;FS=12.519;HRun=0;HaplotypeScore=187.0806;InbreedingCoeff=0.3093;MQ=42.36;MQ0=29;MQRankSum=2.090;QD=9.53;ReadPosRankSum=2.237;VQSLOD=3.1775;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:25:24.94:340,25,0	1/1:11,0:8:5.91:104,6,0	0/0:56,0:16:23.75:0,24,339	0/0:65,0:23:19.71:0,20,267	1/1:25,0:23:11.20:88,11,0	1/1:23,0:22:10.44:149,10,0	0/1:23,0:21:5.57:94,0,6	1/1:40,0:38:27.83:155,28,0	1/1:22,0:21:12.12:120,12,0	1/1:14,14:30:7.41:949,7,0	1/1:6,8:14:17.96:437,18,0	1/1:13,0:13:5.99:50,6,0	1/1:23,0:23:10.41:159,10,0	1/1:19,0:18:5.68:48,6,0	1/1:8,12:24:26.56:532,27,0	1/1:26,0:25:7.05:180,7,0	1/1:15,0:13:3.05:26,3,0	1/1:14,0:14:5.78:18,6,0	1/1:9,0:13:12.76:106,13,0	0/1:5,1:16:48.44:121,0,48	0/1:10,0:16:13.21:13,0,74	1/1:20,0:20:6.68:92,7,0	1/1:8,7:16:14.96:365,15,0	1/1:14,18:32:30.10:730,30,0	1/1:30,0:29:14.41:220,14,0	1/1:24,0:23:4.29:58,4,0	1/1:19,0:17:4.75:27,5,0	1/1:5,0:5:8.45:67,8,0
chr10	9303319	.	AGT	A	3682.06	PASS	AB=0.844;AC=38;AF=0.704;AN=54;BaseQRankSum=11.968;DP=614;FS=0.458;HRun=0;HaplotypeScore=95.9885;InbreedingCoeff=0.5615;MQ=63.62;MQ0=7;MQRankSum=1.081;QD=8.15;ReadPosRankSum=2.932;VQSLOD=3.4123;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,1:26:8.32:0,8,538	0/1:5,6:11:30.76:120,0,31	0/0:25,0:20:3.01:0,3,46	./.	0/0:22,0:22:26.84:0,27,380	0/1:35,5:40:0.08:0,0,952	0/1:21,3:24:28.46:28,0,440	0/0:27,0:27:24.95:0,25,325	1/1:9,13:25:38.61:380,39,0	1/1:12,0:22:4.71:76,5,0	1/1:4,0:14:14.27:72,14,0	1/1:6,18:23:44.96:487,45,0	1/1:6,11:17:30.09:338,30,0	1/1:9,11:20:26.74:264,27,0	1/1:3,0:18:34.09:168,34,0	0/0:17,1:19:2.31:0,2,428	1/1:9,11:21:29.92:318,30,0	0/1:18,1:19:6.70:7,0,319	1/1:18,0:26:15.05:70,15,0	1/1:11,0:27:37.06:188,37,0	1/1:7,0:18:28.36:139,28,0	1/1:16,10:28:29.58:278,30,0	1/1:11,0:17:14.20:70,14,0	1/1:12,0:28:25.50:135,26,0	0/0:24,2:26:11.37:0,11,594	1/1:15,6:21:17.87:173,18,0	1/1:5,8:14:23.90:250,24,0	1/1:9,7:15:1.39:122,1,0
chr10	9306281	.	CAT	C	1126.64	PASS	AB=0.922;AC=25;AF=0.463;AN=54;BaseQRankSum=8.048;DP=317;FS=2.732;HRun=0;HaplotypeScore=62.3281;InbreedingCoeff=0.2867;MQ=56.97;MQ0=0;MQRankSum=0.940;QD=5.29;ReadPosRankSum=0.744;VQSLOD=2.5031;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,1:18:2.74:0,3,506	0/0:2,0:2:3.01:0,3,44	1/1:4,0:1:0.47:1,0,0	0/0:9,0:6:1.55:0,2,4	0/0:12,0:12:33.10:0,33,508	0/0:12,0:11:27.05:0,27,364	0/1:9,1:10:12.30:12,0,310	0/1:36,5:41:92.85:93,0,665	0/1:2,0:2:6.76:7,0,42	1/1:14,0:14:26.80:190,27,0	1/1:17,0:17:20.83:150,21,0	0/0:7,0:7:6.01:0,6,73	0/0:8,0:8:9.02:0,9,120	0/0:7,0:7:6.01:0,6,73	1/1:20,0:20:23.65:167,24,0	0/0:5,0:5:9.02:0,9,122	0/0:13,0:13:0.91:0,1,216	0/1:18,5:23:58.44:58,0,491	1/1:17,0:17:37.39:247,37,0	1/1:12,0:12:5.67:43,6,0	1/1:10,0:10:14.88:107,15,0	./.	1/1:10,0:10:8.93:65,9,0	1/1:9,0:9:11.90:86,12,0	0/1:8,2:10:51.70:52,0,208	0/0:10,0:10:6.54:0,7,196	0/1:7,0:7:7.23:7,0,87	0/1:7,0:6:14.87:15,0,42
chr10	9306297	.	TATAC	T	2890.80	PASS	AB=0.917;AC=19;AF=0.352;AN=54;BaseQRankSum=5.868;DP=333;FS=5.071;HRun=0;HaplotypeScore=76.4690;InbreedingCoeff=0.5880;MQ=55.06;MQ0=1;MQRankSum=-0.811;QD=23.31;ReadPosRankSum=2.189;VQSLOD=3.0568;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:53.90:0,54,1021	0/0:2,0:2:3.01:0,3,46	0/1:13,0:4:13.91:26,0,14	0/0:20,0:9:6:0,6,55	0/0:19,0:19:44.10:0,44,1027	0/0:13,0:12:36.04:0,36,649	0/0:12,0:12:35.90:0,36,696	0/0:37,1:38:25.65:0,26,1462	0/0:4,0:4:5.69:0,6,60	1/1:1,11:12:36.08:586,36,0	1/1:0,17:17:22.01:419,22,0	0/0:8,0:8:6.01:0,6,74	0/0:6,0:6:9.03:0,9,150	0/0:9,0:9:6.01:0,6,75	1/1:1,14:15:23.98:452,24,0	0/0:5,0:5:15.01:0,15,241	0/0:12,0:12:0.75:0,1,217	0/0:22,0:22:56.43:0,56,971	1/1:0,16:16:47.64:680,48,0	1/1:1,7:9:5.78:119,6,0	1/1:0,12:12:15.05:297,15,0	./.	1/1:1,8:9:9.50:179,10,0	1/1:0,8:8:12.04:238,12,0	0/0:10,0:10:26.73:0,27,411	0/1:10,0:9:31.16:31,0,199	0/0:7,0:7:8.62:0,9,116	0/1:2,1:2:50.20:53,0,50
chr10	9306299	.	TAC	T	1222.28	PASS	AB=0.933;AC=22;AF=0.407;AN=54;BaseQRankSum=10.340;DP=328;FS=7.209;HRun=0;HaplotypeScore=71.7730;InbreedingCoeff=0.3712;MQ=54.92;MQ0=3;MQRankSum=-0.562;QD=8.26;ReadPosRankSum=2.941;VQSLOD=2.5074;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:42.32:0,42,649	0/0:1,0:1:2.97:0,3,20	0/1:14,0:4:13.95:22,0,14	0/0:17,0:7:6:0,6,54	0/0:18,0:18:41.09:0,41,653	0/0:11,0:10:27.05:0,27,375	0/0:12,0:12:24.34:0,24,439	0/0:37,0:37:29.31:0,29,891	0/1:4,0:4:16.99:32,0,17	1/1:12,0:12:35.90:287,36,0	1/1:17,0:17:20.92:162,21,0	0/0:8,0:8:2.99:0,3,23	0/0:7,0:7:6:0,6,53	0/0:8,1:9:2.99:0,3,24	1/1:15,0:15:21.81:164,22,0	0/0:5,0:5:12.01:0,12,149	0/1:11,1:12:37.07:37,0,84	0/0:22,0:22:4.67:0,5,537	1/1:16,0:16:37.81:261,38,0	1/1:9,0:9:5.97:47,6,0	1/1:13,0:12:14.94:115,15,0	./.	1/1:9,0:9:8.97:70,9,0	1/1:8,0:8:11.95:92,12,0	0/0:10,0:10:3.50:0,4,219	0/1:8,1:8:64.75:72,0,65	0/1:5,2:7:29.12:29,0,44	0/1:3,0:2:16.62:17,0,24
chr10	9306321	.	CACACAT	C	1509.20	PASS	AC=16;AF=0.308;AN=52;BaseQRankSum=5.801;DP=386;FS=0.000;HRun=0;HaplotypeScore=101.0240;InbreedingCoeff=0.9109;MQ=54.05;MQ0=6;MQRankSum=-7.151;QD=21.56;ReadPosRankSum=-4.609;VQSLOD=1.6277;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:50.52:0,51,1665	./.	0/0:26,0:8:15.01:0,15,364	0/0:27,0:12:18.92:0,19,415	0/0:27,0:27:72.25:0,72,2348	0/0:10,0:9:23.92:0,24,799	0/0:17,0:17:45.14:0,45,1389	0/0:25,0:25:39.11:0,39,986	1/1:1,5:6:6.02:108,6,0	0/0:17,0:17:45.15:0,45,1373	0/0:18,0:18:26.10:0,26,814	1/1:0,6:6:12.04:199,12,0	1/1:0,7:7:15.05:256,15,0	1/1:1,8:9:9.03:129,9,0	0/0:12,0:12:24.07:0,24,720	0/0:5,0:5:15.05:0,15,448	1/1:8,9:17:12.04:190,12,0	0/0:22,0:22:39.13:0,39,1159	0/0:19,0:19:39.13:0,39,1278	0/0:11,0:10:12.04:0,12,384	0/0:14,0:13:24.08:0,24,787	./.	0/0:15,0:15:30.05:0,30,869	0/0:11,0:11:21.06:0,21,617	0/0:11,0:11:30.10:0,30,972	1/1:4,8:11:21.06:396,21,0	1/1:2,8:10:21.53:352,22,0	1/1:2,1:2:3.01:64,3,0
chr10	9306498	.	T	TA	3542.65	PASS	AB=0.933;AC=21;AF=0.375;AN=56;BaseQRankSum=2.440;DP=421;FS=1.484;HRun=4;HaplotypeScore=49.7653;InbreedingCoeff=0.8916;MQ=73.06;MQ0=1;MQRankSum=-6.116;QD=28.12;ReadPosRankSum=3.349;VQSLOD=2.9019;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:72.15:0,72,782	1/1:1,3:4:6.02:81,6,0	0/0:26,0:17:40.56:0,41,317	0/0:24,0:13:17.39:0,17,125	0/0:20,0:20:57.14:0,57,629	0/0:22,0:22:66.14:0,66,717	0/0:6,0:6:18.02:0,18,185	0/0:30,0:30:64.26:0,64,880	1/1:1,10:11:27.09:364,27,0	0/0:20,0:20:54.15:0,54,604	0/0:12,0:12:36.10:0,36,399	1/1:2,10:12:24.01:301,24,0	1/1:0,9:9:24.08:323,24,0	1/1:0,9:9:24.08:323,24,0	0/0:6,0:6:18.04:0,18,196	0/0:14,1:15:1.93:0,2,394	1/1:1,20:21:29.70:589,30,0	0/0:14,0:14:39.08:0,39,422	0/0:23,0:23:63.15:0,63,688	0/0:19,0:19:54.15:0,54,604	0/0:4,0:4:12.03:0,12,136	1/1:1,4:5:9.03:122,9,0	0/0:10,0:10:24.06:0,24,264	0/1:13,1:14:1.49:1,0,367	0/0:19,0:19:51.13:0,51,568	1/1:0,13:13:39.11:510,39,0	1/1:1,11:12:27.09:364,27,0	1/1:1,15:16:42.61:564,43,0
chr10	9306915	.	A	AT	7639.82	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=18.197;DP=653;FS=3.334;HRun=1;HaplotypeScore=78.4132;InbreedingCoeff=0.9392;MQ=59.46;MQ0=3;MQRankSum=-0.803;QD=33.51;ReadPosRankSum=3.191;VQSLOD=4.8834;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,111,1441	1/1:1,10:11:24.08:359,24,0	0/0:34,0:14:39.12:0,39,496	0/1:25,0:7:5:5,0,171	0/0:21,0:21:60.20:0,60,779	0/0:20,0:20:54.18:0,54,701	0/0:23,0:23:63.20:0,63,816	0/0:29,0:27:78.25:0,78,1012	1/1:1,22:23:60.20:899,60,0	0/0:30,0:30:90.27:0,90,1133	0/0:22,0:22:63.20:0,63,818	1/1:1,17:18:45.15:675,45,0	1/1:2,22:24:57.19:854,57,0	1/1:2,16:18:48.16:719,48,0	0/0:26,0:26:78.24:0,78,999	0/0:22,0:22:60.19:0,60,779	1/1:0,31:31:90.30:1349,90,0	0/0:20,0:20:60.19:0,60,776	0/0:28,0:23:54.18:0,54,701	0/0:25,0:25:72.23:0,72,934	0/0:29,0:29:87.28:0,87,1129	1/1:2,20:22:36.12:539,36,0	0/0:24,0:24:69.22:0,69,896	0/0:17,0:17:51.17:0,51,660	0/0:18,0:18:54.18:0,54,701	1/1:2,23:25:75.19:1071,75,0	1/1:2,22:24:63.21:944,63,0	1/1:0,7:7:15.05:225,15,0
chr10	9307502	.	AGGAGTGG	A	14175.12	PASS	AB=0.545;AC=18;AF=0.321;AN=56;BaseQRankSum=18.539;DP=711;FS=6.796;HRun=0;HaplotypeScore=163.5701;InbreedingCoeff=0.8189;MQ=51.66;MQ0=16;MQRankSum=-18.159;QD=71.95;ReadPosRankSum=1.642;VQSLOD=4.6670;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:93.30:0,93,3630	1/1:0,11:11:33.11:922,33,0	0/0:21,0:3:6.02:0,6,252	0/0:30,0:8:21.07:0,21,802	0/0:42,0:42:99:0,126,5278	0/0:32,0:32:93.32:0,93,3837	0/0:15,0:15:45.15:0,45,1834	0/0:29,0:29:78.27:0,78,3219	1/1:0,15:15:42.14:1173,42,0	0/0:43,0:43:99:0,126,4968	0/0:22,0:22:66.23:0,66,2768	1/1:0,14:14:39.13:1080,39,0	1/1:0,28:27:78.27:2161,78,0	1/1:0,16:16:45.15:1246,45,0	0/0:34,0:34:99:0,102,4108	0/0:25,0:25:75.24:0,75,2959	0/1:4,13:17:99:559,0,129	0/0:40,0:40:99:0,114,4562	0/0:21,0:18:54.15:0,54,2041	0/0:34,0:34:99:0,102,4083	0/0:23,0:23:69.24:0,69,2785	1/1:0,26:26:66.23:1843,66,0	0/0:31,0:31:93.32:0,93,3862	0/0:18,0:18:54.19:0,54,2273	0/0:21,0:21:63.22:0,63,2587	0/1:2,21:23:99:1672,0,110	1/1:1,39:39:99:3016,108,0	1/1:0,7:7:18.06:503,18,0
chr10	9308183	.	CCAG	C	104.32	PASS	AB=0.625;AC=3;AF=0.068;AN=44;BaseQRankSum=3.952;DP=512;FS=0.000;HRun=0;HaplotypeScore=61.9820;InbreedingCoeff=0.3658;MQ=41.06;MQ0=63;MQRankSum=-2.384;QD=8.69;ReadPosRankSum=-1.118;VQSLOD=2.1037;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/0:7,0:5:2.83:0,3,20	0/0:17,0:6:15.03:0,15,303	0/0:18,0:1:3.01:0,3,64	./.	./.	./.	./.	0/0:38,0:31:60:0,60,1145	0/0:26,0:19:48.13:0,48,1052	0/0:6,0:4:5.93:0,6,40	0/0:29,0:27:51.06:0,51,1137	0/0:29,0:23:33.02:0,33,700	0/0:35,0:30:68.92:0,69,1581	0/0:36,0:31:66.23:0,66,1610	0/1:2,3:5:64.73:99,0,65	0/0:34,0:29:40.96:0,41,1533	1/1:4,3:5:8.97:99,9,0	0/0:19,0:11:27.01:0,27,497	0/0:11,0:9:6.02:0,6,132	0/0:65,0:50:69.07:0,69,1527	0/0:14,0:5:3.01:0,3,74	0/0:11,0:9:0.47:0,0,1	0/0:32,0:29:63.22:0,63,1545	./.	0/0:35,0:23:57.05:0,57,1109	0/0:17,0:14:33.11:0,33,798	0/0:12,0:8:9.03:0,9,219
chr10	9308194	.	T	TC	146.44	PASS	AB=0.900;AC=4;AF=0.105;AN=38;BaseQRankSum=4.667;DP=423;FS=0.000;HRun=1;HaplotypeScore=48.4529;InbreedingCoeff=0.4594;MQ=36.32;MQ0=83;MQRankSum=-3.769;QD=8.61;ReadPosRankSum=-1.002;VQSLOD=0.3677;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/1:6,0:5:0:0,0,0	./.	./.	./.	./.	./.	./.	0/0:27,0:22:33.01:0,33,414	0/0:14,0:9:24.08:0,24,335	./.	0/0:25,0:23:42.10:0,42,547	0/0:23,1:19:27.01:0,27,362	0/0:34,1:30:18.44:0,18,809	0/0:33,0:28:50.98:0,51,643	0/1:3,1:3:27.75:28,0,36	0/0:28,1:24:9.46:0,9,707	1/1:0,7:5:15.05:214,15,0	0/0:15,0:5:9.03:0,9,126	0/0:11,0:8:3.01:0,3,42	0/0:55,0:41:53.83:0,54,666	0/0:12,0:6:3.01:0,3,42	0/0:8,0:6:0:0,0,0	0/0:30,0:26:57.08:0,57,751	./.	0/0:24,0:14:33.08:0,33,427	0/0:16,1:14:33.06:0,33,423	0/0:10,0:8:9.03:0,9,126
chr10	9308198	.	AC	A	156.29	PASS	AB=0.778;AC=6;AF=0.158;AN=38;BaseQRankSum=4.530;DP=405;FS=3.581;HRun=1;HaplotypeScore=48.5205;InbreedingCoeff=0.5250;MQ=35.49;MQ0=88;MQRankSum=-3.692;QD=7.81;ReadPosRankSum=-2.558;VQSLOD=-0.0056;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/1:5,0:4:0:0,0,0	./.	./.	./.	./.	1/1:0,2:1:2.97:20,3,0	./.	0/0:27,0:22:24.08:0,24,382	0/0:16,0:8:24.08:0,24,374	./.	0/0:23,0:20:36.12:0,36,571	0/0:25,0:20:24.49:0,24,366	0/0:34,0:29:66.06:0,66,1035	0/0:30,0:26:42.14:0,42,666	0/1:1,4:4:15.79:61,0,16	0/0:28,0:22:54.16:0,54,828	1/1:1,7:6:15.05:182,15,0	0/0:14,0:5:8.99:0,9,116	0/0:11,0:8:3.01:0,3,48	0/0:52,0:39:41.70:0,42,641	0/0:13,0:6:3.01:0,3,48	./.	0/0:30,0:25:48.16:0,48,756	./.	0/0:21,0:11:27.09:0,27,432	0/0:17,0:14:33.10:0,33,504	0/0:8,0:6:9.03:0,9,141
chr10	9308297	.	A	ACAC	1596.10	PASS	AB=0.833;AC=13;AF=0.271;AN=48;BaseQRankSum=-1.215;DP=669;FS=66.379;HRun=0;HaplotypeScore=80.8250;InbreedingCoeff=0.6233;MQ=25.26;MQ0=274;MQRankSum=-5.805;QD=7.49;ReadPosRankSum=-0.413;VQSLOD=-0.0909;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:23:21.07:0,21,309	./.	./.	./.	0/0:9,0:3:3.01:0,3,44	0/0:17,0:9:6.02:0,6,88	0/0:36,0:22:24.08:0,24,353	0/0:23,0:4:12.04:0,12,177	1/1:27,9:16:21.07:434,21,0	0/0:35,0:10:21.07:0,21,309	./.	0/1:28,6:14:29.10:232,0,29	1/1:28,12:21:30.09:615,30,0	1/1:17,5:11:15.01:267,15,0	0/0:23,0:18:24.58:0,25,355	0/0:30,0:27:17.13:0,17,264	0/0:21,4:9:5.62:0,6,88	0/0:18,0:15:21.23:0,21,263	0/0:20,0:7:12.04:0,12,177	0/0:10,0:8:9.03:0,9,132	0/0:63,0:30:27.90:0,28,399	1/1:30,0:7:6.02:123,6,0	0/0:6,0:2:3.01:0,3,44	0/0:49,0:32:39.13:0,39,574	0/0:19,0:12:8.69:0,9,132	1/1:37,4:4:3.01:62,3,0	0/0:11,2:3:3.01:0,3,44	1/1:1,1:2:2.97:20,3,0
chr10	9308337	.	C	CCAG	472.33	PASS	AB=0.988;AC=8;AF=0.190;AN=42;BaseQRankSum=4.389;DP=693;FS=24.228;HRun=0;HaplotypeScore=44.7148;InbreedingCoeff=0.3539;MQ=18.63;MQ0=404;MQRankSum=-3.661;QD=2.36;ReadPosRankSum=-0.953;VQSLOD=-0.6069;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:9:12.04:0,12,219	0/0:14,0:3:1.19:0,1,3	./.	./.	0/0:11,0:3:3.01:0,3,54	0/0:12,0:4:3.01:0,3,39	0/0:29,0:9:15.05:0,15,273	./.	1/1:37,4:13:12.04:291,12,0	0/0:28,0:7:21.07:0,21,383	./.	./.	1/1:41,5:10:8.62:218,9,0	0/1:38,1:5:49.09:67,0,49	0/0:24,0:17:23.75:0,24,443	0/0:22,0:18:24.08:0,24,442	0/0:25,0:5:6.02:0,6,110	0/0:20,0:13:15:0,15,277	0/0:15,0:2:6.02:0,6,111	0/0:14,0:8:5.98:0,6,108	0/0:56,0:19:12.88:0,13,172	./.	0/0:10,0:2:2.97:0,3,20	0/0:49,0:26:31.47:0,31,573	0/0:20,0:6:3.01:0,3,56	0/1:56,0:2:9.98:10,0,50	1/1:17,0:2:1.25:3,1,0	./.
chr10	9308467	.	C	CCAG	669.46	PASS	AB=0.957;AC=8;AF=0.444;AN=18;BaseQRankSum=1.200;DP=759;FS=30.819;HRun=0;HaplotypeScore=22.3847;MQ=8.07;MQ0=605;MQRankSum=1.287;QD=1.80;ReadPosRankSum=-0.327;VQSLOD=-0.1744;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	./.	./.	./.	./.	0/1:74,2:14:83.94:84,0,248	0/0:34,0:2:6:0,6,79	./.	0/1:60,4:6:43.08:201,0,43	0/1:63,3:7:42.91:206,0,43	0/1:60,2:7:93.47:122,0,93	./.	0/0:20,0:5:2.80:0,3,54	0/1:36,3:5:16.17:137,0,16	./.	./.	./.	1/1:32,0:1:1.25:3,1,0	./.	./.	./.	./.	./.	0/1:31,1:3:0:0,0,0	./.
chr10	9309033	.	CCAG	C	41.06	PASS	AB=0.980;AC=11;AF=0.393;AN=28;BaseQRankSum=2.460;DP=664;FS=0.000;HRun=0;HaplotypeScore=47.6617;InbreedingCoeff=0.0914;MQ=10.59;MQ0=498;MQRankSum=-1.484;QD=0.13;ReadPosRankSum=-2.704;VQSLOD=0.9636;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	1/1:8,0:1:0.47:1,0,0	./.	0/0:33,0:5:6.02:0,6,146	./.	0/1:48,1:8:9.62:34,0,10	./.	./.	0/1:59,1:20:11.76:12,0,283	1/1:50,1:5:3.01:53,3,0	0/0:48,2:13:9.03:0,9,218	0/0:22,0:8:6.01:0,6,146	0/0:17,0:4:3.01:0,3,73	0/1:54,2:11:1.97:2,0,158	0/1:20,0:2:0:0,0,0	0/0:14,0:1:3.01:0,3,74	./.	./.	./.	./.	1/1:39,0:5:3.76:17,4,0	./.	./.	0/1:32,1:9:6.90:17,0,7	0/0:7,0:1:2.04:0,2,6
chr10	9309049	.	ACAC	A	198.54	PASS	AB=0.945;AC=5;AF=0.250;AN=20;BaseQRankSum=2.047;DP=605;FS=0.000;HRun=0;HaplotypeScore=44.5867;InbreedingCoeff=-0.1772;MQ=9.85;MQ0=466;MQRankSum=0.031;QD=1.17;ReadPosRankSum=0.031;VQSLOD=1.2407;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	./.	./.	0/0:29,0:3:3.01:0,3,63	./.	0/1:41,4:6:46.96:115,0,47	./.	./.	0/1:54,3:16:62.56:104,0,63	0/0:47,1:5:3.01:0,3,58	0/0:47,1:10:2.97:0,3,20	0/0:23,0:8:2.97:0,3,20	./.	0/0:52,1:11:12.01:0,12,186	./.	./.	./.	./.	./.	./.	1/1:39,0:5:2:34,2,0	./.	./.	0/1:26,1:7:30.32:30,0,57	0/0:9,0:1:2.98:0,3,21
chr10	9309061	.	CCAG	C	311.62	PASS	AB=0.914;AC=5;AF=0.313;AN=16;BaseQRankSum=0.752;DP=598;FS=0.000;HRun=0;HaplotypeScore=51.1367;MQ=9.64;MQ0=471;MQRankSum=-1.577;QD=1.92;ReadPosRankSum=1.723;VQSLOD=1.1543;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	./.	./.	0/0:29,0:1:3.01:0,3,73	./.	0/1:37,3:8:90.77:94,0,91	./.	./.	0/1:52,7:18:33.23:167,0,33	0/0:42,0:5:3.01:0,3,65	0/0:47,2:11:2.92:0,3,17	./.	./.	0/0:47,2:10:12.04:0,12,211	./.	./.	./.	./.	./.	./.	1/1:36,5:5:8.81:84,9,0	./.	./.	0/1:20,2:5:53.57:54,0,61	./.
chr10	9309077	.	ACAC	A	324.59	PASS	AB=0.965;AC=8;AF=0.667;AN=12;BaseQRankSum=-1.216;DP=486;FS=0.000;HRun=0;HaplotypeScore=48.6183;MQ=8.82;MQ0=388;MQRankSum=-1.747;QD=1.48;ReadPosRankSum=-0.988;VQSLOD=1.2801;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	./.	./.	./.	./.	0/1:33,2:6:99:120,0,109	./.	./.	0/1:46,2:12:99:99,0,142	./.	0/1:38,2:9:39.07:39,0,57	./.	./.	1/1:37,2:7:3.01:45,3,0	./.	./.	./.	./.	./.	./.	1/1:38,1:4:4.12:70,4,0	./.	./.	0/1:18,0:4:30.33:30,0,57	./.
chr10	9309089	.	CCAG	C	313.56	PASS	AB=0.948;AC=8;AF=0.667;AN=12;BaseQRankSum=-0.462;DP=427;FS=0.000;HRun=0;HaplotypeScore=39.8849;MQ=8.85;MQ0=336;MQRankSum=0.391;QD=1.73;ReadPosRankSum=-0.107;VQSLOD=0.7093;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	./.	./.	./.	./.	0/1:29,1:6:69.52:70,0,102	./.	./.	0/1:36,2:11:99:118,0,137	./.	0/1:30,2:7:22.16:22,0,67	./.	./.	1/1:30,0:6:3:26,3,0	./.	./.	./.	./.	./.	./.	1/1:34,3:4:4.26:104,4,0	./.	./.	0/1:13,1:3:53.56:54,0,55	./.
chr10	9309116	.	ACCG	A	326.88	PASS	AC=8;AF=1.00;AN=8;DP=314;FS=0.000;HRun=0;HaplotypeScore=19.8245;MQ=6.88;MQ0=266;QD=5.45;VQSLOD=0.6745;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	./.	./.	./.	./.	1/1:15,0:3:6.02:76,6,0	./.	./.	1/1:14,3:4:12.04:170,12,0	./.	1/1:16,2:2:6.02:94,6,0	./.	./.	1/1:8,2:1:3.01:55,3,0	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.
chr10	9309117	.	CCGG	C	380.67	PASS	AC=8;AF=1.00;AN=8;DP=307;FS=0.000;HRun=0;HaplotypeScore=16.9348;MQ=6.58;MQ0=263;QD=6.92;VQSLOD=1.3107;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	./.	./.	./.	./.	1/1:9,4:2:6.02:111,6,0	./.	./.	1/1:9,7:4:12.04:205,12,0	./.	1/1:16,1:2:6.02:93,6,0	./.	./.	1/1:9,0:1:3.01:38,3,0	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.
chr10	9309173	.	CCAG	C	220.94	PASS	AB=0.941;AC=8;AF=0.400;AN=20;BaseQRankSum=2.491;DP=525;FS=0.000;HRun=0;HaplotypeScore=21.9696;InbreedingCoeff=0.0412;MQ=9.08;MQ0=434;MQRankSum=0.171;QD=1.52;ReadPosRankSum=0.444;VQSLOD=0.7914;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	./.	./.	./.	./.	0/0:36,1:8:12.93:0,13,293	0/0:15,0:1:2.98:0,3,22	./.	0/1:24,1:4:3.02:3,0,82	0/1:34,4:9:57.74:178,0,58	0/1:30,1:4:46.09:46,0,137	./.	./.	0/0:25,0:6:2.98:0,3,73	1/1:18,0:2:3:26,3,0	./.	./.	./.	./.	./.	./.	./.	0/0:55,0:2:6:0,6,97	0/1:12,1:2:0:0,0,0	1/1:19,1:7:3.01:55,3,0
chr10	9310725	.	ACAC	A	3781.77	PASS	AB=0.787;AC=15;AF=0.268;AN=56;BaseQRankSum=10.160;DP=750;FS=15.253;HRun=0;HaplotypeScore=73.5925;InbreedingCoeff=0.1237;MQ=33.46;MQ0=301;MQRankSum=-0.002;QD=9.87;ReadPosRankSum=-1.153;VQSLOD=1.6529;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:17:27.09:0,27,566	0/1:17,4:7:90.31:161,0,90	1/1:25,2:3:9.03:127,9,0	0/1:24,6:9:99:242,0,109	0/0:7,0:4:9.03:0,9,189	0/0:17,0:12:27.06:0,27,523	0/0:36,0:25:61.24:0,61,1079	0/0:26,0:11:30.10:0,30,627	0/1:37,7:12:35.68:289,0,36	0/0:15,0:4:12.04:0,12,249	0/0:7,0:2:5.98:0,6,83	1/1:33,13:19:21.15:561,21,0	0/1:23,8:12:31.32:290,0,31	0/1:38,21:30:99:740,0,155	0/0:22,0:16:36.12:0,36,753	0/0:34,1:28:18.09:0,18,1209	0/1:28,14:14:25.06:349,0,25	0/0:10,0:8:21.07:0,21,437	0/0:16,0:8:20.90:0,21,387	0/0:17,0:12:31.35:0,31,684	0/0:55,0:26:58.44:0,58,1253	0/1:10,5:7:87.64:201,0,88	0/0:13,0:10:24.08:0,24,498	0/0:57,0:44:93.70:0,94,1809	0/0:12,0:4:9.03:0,9,188	0/1:23,8:16:99:313,0,348	0/1:16,10:15:24.19:372,0,24	1/1:8,3:4:9.03:134,9,0
chr10	9312074	.	TG	T	8360	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=3.630;DP=627;FS=14.549;HRun=9;HaplotypeScore=90.4202;InbreedingCoeff=0.9849;MQ=82.84;MQ0=0;MQRankSum=-2.551;QD=21.94;ReadPosRankSum=3.779;VQSLOD=4.2021;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,34:43:90.03:824,90,0	0/0:10,0:10:27.06:0,27,301	0/0:23,0:23:42.01:0,42,427	0/0:18,0:18:6.16:0,6,237	1/1:2,22:24:63.02:576,63,0	1/1:4,11:15:27:247,27,0	1/1:2,21:23:54.50:495,54,0	1/1:9,24:33:66:599,66,0	0/0:15,0:16:44.97:0,45,499	1/1:4,21:25:63.02:572,63,0	1/1:3,22:25:60.03:549,60,0	0/0:33,0:33:90.71:0,91,1018	0/0:16,0:16:45.13:0,45,519	0/0:21,1:22:32.71:0,33,625	1/1:1,24:25:69.04:632,69,0	1/1:2,14:16:42.02:384,42,0	0/0:25,0:25:57.14:0,57,644	1/1:5,20:25:60.03:549,60,0	1/1:2,9:11:26.97:235,27,0	1/1:1,23:24:66.03:604,66,0	1/1:1,23:24:63.03:576,63,0	0/0:15,0:15:42.12:0,42,481	1/1:1,20:22:59.07:528,59,0	1/1:3,22:25:63.03:577,63,0	1/1:4,17:21:45.01:412,45,0	0/0:35,1:36:47.74:0,48,793	0/0:21,1:21:23.69:0,24,526	0/0:10,0:10:30.09:0,30,346
chr10	9312644	.	T	TGA	1227.99	PASS	AB=0.872;AC=26;AF=0.520;AN=50;BaseQRankSum=-4.735;DP=577;FS=0.000;HRun=0;HaplotypeScore=79.9969;InbreedingCoeff=0.0210;MQ=69.52;MQ0=5;MQRankSum=-0.829;QD=3.36;ReadPosRankSum=1.842;VQSLOD=1.7428;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:20,0:19:24.45:113,0,24	0/1:9,3:12:27.21:38,0,27	./.	./.	0/0:22,0:23:11.83:0,12,100	1/1:12,8:21:6.02:89,6,0	0/1:9,2:11:29.36:29,0,115	1/1:30,0:30:0.47:2,0,0	0/1:24,1:25:11.53:12,0,253	1/1:16,0:16:0.47:2,0,0	0/0:23,0:23:18:0,18,170	0/1:18,1:20:26.37:76,0,26	1/1:21,0:21:3.01:43,3,0	1/1:8,7:15:3.01:44,3,0	0/0:29,0:29:24.01:0,24,234	1/1:10,8:20:3.94:190,4,0	0/1:15,7:22:99:137,0,106	0/1:13,11:24:14.39:204,0,14	0/0:17,0:18:3.31:0,3,15	0/0:19,0:23:2.84:0,3,14	0/0:12,0:18:11.52:0,12,66	0/1:24,0:24:0.01:0,0,0	./.	0/0:14,0:17:23.41:0,23,178	1/1:14,0:14:9:92,9,0	0/1:24,0:24:14.60:15,0,41	0/1:22,14:36:11.35:246,0,11	1/1:7,3:10:3.48:45,3,0
chr10	9313327	.	GCA	G	633.86	PASS	AB=0.984;AC=12;AF=0.214;AN=56;BaseQRankSum=7.981;DP=542;FS=0.518;HRun=0;HaplotypeScore=131.2841;InbreedingCoeff=0.3345;MQ=64.07;MQ0=3;MQRankSum=-2.303;QD=4.14;ReadPosRankSum=2.884;VQSLOD=2.8922;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:66.16:0,66,940	0/0:8,0:8:1.62:0,2,22	0/0:9,0:4:9.03:0,9,142	0/0:14,0:11:7.27:0,7,190	0/0:16,0:16:8.73:0,9,87	0/0:21,0:21:30.01:0,30,407	0/0:41,1:41:73.39:0,73,1048	0/0:19,0:18:39.79:0,40,586	0/1:15,0:15:3.85:110,0,4	0/0:15,0:15:35.35:0,35,529	0/0:9,0:9:18.03:0,18,266	0/1:17,0:17:7.68:98,0,8	0/1:18,1:19:46.12:85,0,46	0/1:19,1:20:22.72:85,0,23	0/0:10,0:10:18.26:0,18,241	0/0:11,0:11:23.99:0,24,306	1/1:32,1:33:19.25:205,19,0	0/0:20,0:20:49.21:0,49,674	0/0:16,0:16:39.07:0,39,602	0/0:16,0:16:27.06:0,27,435	0/0:35,0:35:64.02:0,64,996	1/1:14,0:14:15.20:97,15,0	0/0:24,0:24:48.10:0,48,705	0/0:40,0:40:78.15:0,78,1127	0/0:25,0:25:48.67:0,49,637	0/1:14,0:14:4.16:4,0,72	0/1:14,0:14:68.06:68,0,72	1/1:7,0:7:2.67:38,3,0
chr10	9313329	.	ACG	A	3525.65	PASS	AB=0.985;AC=23;AF=0.411;AN=56;BaseQRankSum=0.448;DP=553;FS=0.000;HRun=0;HaplotypeScore=124.2784;InbreedingCoeff=0.7300;MQ=60.85;MQ0=4;MQRankSum=-1.643;QD=15.33;ReadPosRankSum=2.181;VQSLOD=3.4091;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,1:41:16.19:0,16,424	1/1:8,0:8:3:27,3,0	0/0:9,0:4:8.97:0,9,73	0/1:11,0:8:13.75:14,0,26	0/0:17,0:17:5.72:0,6,44	0/0:21,0:21:23.88:0,24,217	0/1:41,2:42:15.53:16,0,424	0/0:21,0:20:21.62:0,22,272	1/1:12,5:17:35.89:396,36,0	0/0:14,0:14:18.05:0,18,329	0/0:8,0:8:11.98:0,12,138	1/1:11,7:18:33.84:417,34,0	1/1:15,4:19:34.93:340,35,0	1/1:15,5:20:45.85:428,46,0	0/0:12,0:12:12.08:0,12,128	0/1:12,0:12:5.98:6,0,95	1/1:22,11:33:78.51:815,79,0	0/0:21,0:21:45.14:0,45,421	0/0:16,0:16:26.85:0,27,261	0/0:16,0:16:30.63:0,31,227	0/0:36,0:36:49.39:0,49,557	1/1:10,3:13:33.45:334,33,0	0/0:24,0:24:44.36:0,44,392	0/0:39,0:39:71.65:0,72,692	0/0:26,1:27:15.14:0,15,283	1/1:15,0:15:13.58:296,14,0	1/1:10,4:14:24.02:265,24,0	1/1:5,2:7:16.99:172,17,0
chr10	9313331	.	GCGCA	G	2135.54	PASS	AB=0.963;AC=19;AF=0.339;AN=56;BaseQRankSum=-0.882;DP=549;FS=1.962;HRun=0;HaplotypeScore=146.9319;InbreedingCoeff=0.6735;MQ=59.52;MQ0=5;MQRankSum=-1.081;QD=12.42;ReadPosRankSum=3.846;VQSLOD=3.1858;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:40:38.43:0,38,545	1/1:0,7:7:3.01:60,3,0	0/0:8,0:3:8.97:0,9,73	0/1:11,0:8:13.75:14,0,26	0/0:19,0:18:5.96:0,6,44	0/0:20,0:20:23.88:0,24,219	0/0:39,0:39:58.91:0,59,628	0/0:23,0:22:29.74:0,30,321	1/1:16,0:16:11.37:182,11,0	0/0:14,0:14:36.23:0,36,519	0/0:10,0:10:14.02:0,14,192	1/1:17,2:20:0.57:232,1,0	1/1:15,2:17:28.21:240,28,0	1/1:19,1:20:26.90:348,27,0	0/0:10,0:10:12.39:0,12,175	0/0:11,0:11:15.88:0,16,162	1/1:30,3:34:49.76:549,50,0	0/0:22,0:22:50.32:0,50,520	0/0:18,0:18:33.56:0,34,326	0/0:15,0:15:30.84:0,31,278	0/0:35,0:35:44.55:0,45,769	1/1:13,0:14:30.50:267,31,0	0/0:24,0:24:44.53:0,45,545	0/0:40,0:40:71.46:0,71,985	0/0:27,0:27:46.19:0,46,363	0/1:15,0:15:20.94:221,0,21	1/1:9,1:10:11.54:88,12,0	0/1:7,1:8:4.60:127,0,5
chr10	9313333	.	G	GCACA	2822.56	PASS	AB=0.861;AC=32;AF=0.615;AN=52;BaseQRankSum=-7.073;DP=578;FS=4.176;HRun=0;HaplotypeScore=163.2072;InbreedingCoeff=0.0521;MQ=58.72;MQ0=5;MQRankSum=1.802;QD=6.11;ReadPosRankSum=-4.097;VQSLOD=1.6674;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:41,0:40:20.87:235,21,0	0/0:7,0:7:2.50:0,2,9	./.	./.	0/0:5,1:17:0:0,0,0	0/1:10,1:24:0:0,0,0	1/1:41,0:41:27.06:313,27,0	1/1:26,0:25:20.59:169,21,0	0/1:17,0:17:12.93:13,0,64	0/1:9,7:18:24.97:251,0,25	1/1:5,6:12:8.22:92,8,0	0/0:20,0:20:0.60:0,1,201	0/0:17,0:18:13.85:0,14,125	0/1:18,0:19:17.08:17,0,127	1/1:3,2:11:5.75:83,6,0	1/1:12,0:12:7.36:77,7,0	0/0:35,0:35:1.33:0,1,304	0/1:24,0:24:56.29:101,0,56	1/1:17,2:20:13.72:181,14,0	1/1:8,5:15:5.75:83,6,0	1/1:19,16:39:20.50:317,20,0	0/1:15,0:15:28.11:28,0,79	0/1:13,1:25:5.21:93,0,5	0/1:18,17:41:10.30:557,0,10	1/1:23,3:27:19.98:251,20,0	1/1:16,0:16:11.45:73,11,0	0/1:10,0:10:7.85:8,0,76	0/1:8,0:8:29.30:29,0,47
chr10	9313403	.	ACTC	A	6433.73	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=11.537;DP=517;FS=1.690;HRun=0;HaplotypeScore=103.4057;InbreedingCoeff=0.9904;MQ=83.59;MQ0=0;MQRankSum=-7.012;QD=41.24;ReadPosRankSum=3.061;VQSLOD=5.8095;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:63.22:0,63,1368	1/1:0,4:4:9.03:147,9,0	0/0:25,0:25:64.08:0,64,1285	0/0:24,0:23:60.20:0,60,1223	0/0:13,0:13:36:0,36,788	0/0:14,0:14:30.10:0,30,657	0/0:25,0:25:69.24:0,69,1506	0/0:18,0:18:51.18:0,51,1117	1/1:3,12:15:36.12:588,36,0	0/0:20,0:20:57.18:0,57,1190	0/0:18,0:18:48.16:0,48,1070	1/1:2,16:18:51.16:807,51,0	1/1:3,14:17:39.13:636,39,0	1/1:1,16:17:48.16:783,48,0	0/0:14,0:14:33.11:0,33,737	0/0:12,0:12:36.12:0,36,804	1/1:8,26:34:81.25:1280,81,0	0/0:23,1:24:23.27:0,23,1476	0/0:19,0:19:54.19:0,54,1172	0/0:16,0:16:42.10:0,42,890	0/0:30,0:30:51.17:0,51,1018	1/1:1,12:13:36.12:588,36,0	0/0:21,0:21:51.02:0,51,1110	0/0:26,0:26:53.97:0,54,1206	0/0:20,0:20:57.20:0,57,1266	1/1:1,13:14:39.13:636,39,0	1/1:2,11:13:36.12:586,36,0	1/1:1,10:11:24.08:382,24,0
chr10	9314713	.	GA	G	7005.18	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=3.253;DP=675;FS=0.000;HRun=2;HaplotypeScore=78.0908;InbreedingCoeff=0.9991;MQ=83.77;MQ0=0;MQRankSum=-1.924;QD=35.74;ReadPosRankSum=1.804;VQSLOD=5.3205;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,111,1599	0/0:10,0:10:30.09:0,30,430	0/0:18,0:18:53.20:0,53,742	0/0:21,0:21:57.05:0,57,786	0/0:24,0:24:69.22:0,69,1012	0/0:15,0:15:45.14:0,45,656	0/0:25,0:25:75.22:0,75,1081	0/0:33,0:33:93.31:0,93,1376	0/0:28,0:28:84.28:0,84,1241	1/1:0,25:25:75.24:973,75,0	1/1:0,15:15:45.15:584,45,0	0/0:27,0:27:78.26:0,78,1169	0/0:30,0:30:90.30:0,90,1348	0/0:20,0:20:60.19:0,60,879	1/1:0,36:36:93.30:1207,93,0	0/0:20,0:20:57.19:0,57,853	0/0:41,0:41:99:0,123,1798	0/0:11,0:11:30.10:0,30,435	1/1:2,27:29:81.14:970,81,0	1/1:1,22:23:63.09:778,63,0	1/1:0,22:22:63.20:818,63,0	0/0:28,0:28:84.27:0,84,1232	1/1:0,22:22:57.19:740,57,0	1/1:0,24:24:72.23:935,72,0	0/0:26,0:26:75.25:0,75,1122	0/0:35,0:35:99:0,105,1554	0/0:22,0:22:66.21:0,66,962	0/0:7,0:7:21.04:0,21,270
chr10	9315431	.	CTCCT	C	7287.63	PASS	AB=0.545;AC=19;AF=0.339;AN=56;BaseQRankSum=15.385;DP=616;FS=6.957;HRun=0;HaplotypeScore=108.2262;InbreedingCoeff=0.9189;MQ=65.60;MQ0=0;MQRankSum=-3.963;QD=39.61;ReadPosRankSum=3.571;VQSLOD=4.9217;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:63.22:0,63,1624	0/1:2,10:12:41.27:547,0,41	0/0:23,0:19:32.48:0,32,686	0/0:22,0:21:40.69:0,41,909	0/0:25,0:25:69.24:0,69,1690	0/0:22,0:22:66.23:0,66,1632	0/0:18,0:18:42.14:0,42,1057	0/0:36,0:36:75.24:0,75,1757	1/1:4,18:22:54.12:925,54,0	0/0:24,0:24:72.24:0,72,1735	0/0:27,0:27:72.25:0,72,1824	1/1:0,13:13:30.10:532,30,0	1/1:5,8:13:21.07:363,21,0	1/1:2,19:21:54.18:944,54,0	0/0:29,0:29:72.24:0,72,1770	0/0:23,0:23:66.22:0,66,1634	1/1:6,26:32:67.05:1096,67,0	0/0:27,0:27:78.27:0,78,1888	0/0:16,0:16:42.14:0,42,1051	0/0:28,0:28:75.26:0,75,1779	0/0:26,0:26:72.25:0,72,1823	1/1:1,19:20:41.98:605,42,0	0/0:20,0:20:57.19:0,57,1385	0/0:21,0:21:54.14:0,54,1259	0/0:21,0:21:60.21:0,60,1535	1/1:0,24:24:72.22:1213,72,0	1/1:3,17:20:39.13:692,39,0	1/1:0,7:7:21.07:371,21,0
chr10	9316038	.	C	CA	7459.14	PASS	AB=0.740;AC=20;AF=0.357;AN=56;BaseQRankSum=-15.720;DP=639;FS=1.039;HRun=4;HaplotypeScore=80.5361;InbreedingCoeff=0.8749;MQ=87.36;MQ0=0;MQRankSum=-3.903;QD=32.01;ReadPosRankSum=1.851;VQSLOD=5.4263;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:96.27:0,96,1088	1/1:2,12:14:36.08:471,36,0	0/0:27,0:27:66.19:0,66,747	0/0:25,0:25:59.68:0,60,616	0/0:20,0:20:57.14:0,57,629	0/0:25,0:25:63.15:0,63,695	0/0:40,0:40:99:0,114,1251	0/0:31,0:31:81.23:0,81,919	1/1:1,22:23:60.20:821,60,0	0/0:21,0:21:57.16:0,57,646	0/0:11,0:11:33.05:0,33,346	1/1:2,27:29:72.24:980,72,0	1/1:3,15:18:42.14:575,42,0	1/1:2,21:23:51.17:698,51,0	0/0:29,0:29:81.23:0,81,919	0/0:23,0:23:66.17:0,66,738	1/1:0,29:29:84.28:1149,84,0	0/1:13,1:14:4.92:5,0,338	0/0:13,0:13:27.07:0,27,298	0/0:17,0:17:51.10:0,51,564	0/0:31,0:31:72.18:0,72,807	1/1:2,20:22:60.20:816,60,0	0/0:12,0:12:35.77:0,36,385	0/0:31,0:31:87.18:0,87,959	0/0:14,0:13:36.05:0,36,384	0/1:4,19:23:7.35:674,0,7	1/1:4,22:26:63.21:862,63,0	1/1:1,11:12:30.10:409,30,0
chr10	9316389	.	G	GA	5804.67	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-15.092;DP=626;FS=21.896;HRun=8;HaplotypeScore=56.6547;InbreedingCoeff=0.9902;MQ=73.90;MQ0=4;MQRankSum=0.399;QD=26.38;ReadPosRankSum=-0.200;VQSLOD=3.1696;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:12,48:60:99:1500,108,0	0/0:9,0:9:24.01:0,24,220	0/0:25,0:15:35.79:0,36,288	0/0:24,0:18:20.10:0,20,253	1/1:1,22:23:65.26:686,65,0	1/1:2,19:22:51.02:570,51,0	1/1:4,24:28:66.20:764,66,0	1/1:4,22:26:60.16:724,60,0	0/0:14,0:14:33:0,33,302	0/0:27,0:27:68.99:0,69,616	0/0:22,0:22:63.01:0,63,571	0/0:20,0:20:60.02:0,60,544	0/0:20,0:20:54.02:0,54,494	0/0:11,0:11:30:0,30,270	0/0:15,0:15:38.92:0,39,339	1/1:4,14:19:11.54:369,12,0	0/0:32,0:33:88.79:0,89,781	1/1:2,14:16:39.09:438,39,0	0/0:18,0:18:44.96:0,45,396	0/0:25,0:25:66:0,66,595	0/0:12,0:12:33.01:0,33,302	0/0:23,0:23:59.99:0,60,541	0/0:17,0:17:42.02:0,42,384	0/0:34,0:34:99:0,99,895	1/1:2,24:26:66.18:754,66,0	0/0:23,0:23:56.96:0,57,512	0/0:29,0:29:68.47:0,68,603	0/0:5,0:5:15.01:0,15,137
chr10	9316920	.	GGAGAGAGAGAGA	G	403.99	PASS	AB=0.887;AC=9;AF=0.173;AN=52;BaseQRankSum=4.964;DP=522;FS=51.669;HRun=0;HaplotypeScore=169.4255;InbreedingCoeff=0.3483;MQ=66.98;MQ0=10;MQRankSum=-4.506;QD=3.01;ReadPosRankSum=-0.559;VQSLOD=1.2235;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:17:6.47:0,6,72	0/0:13,0:13:9.03:0,9,378	0/0:19,0:13:0:0,0,0	0/1:35,0:18:0:0,0,0	0/0:16,0:16:2.99:0,3,24	0/1:14,0:16:18.75:38,0,19	0/0:27,0:27:1.82:0,2,5	0/0:22,0:22:1.72:0,2,4	0/0:15,0:15:6.17:0,6,570	./.	1/1:11,3:14:2.81:102,3,0	0/0:15,0:17:15.05:0,15,451	0/0:19,0:19:27.31:0,27,680	0/0:21,0:19:12.04:0,12,372	0/0:19,0:19:0.89:0,1,2	0/1:12,0:17:8.14:177,0,8	0/0:17,0:17:16.61:0,17,416	0/0:12,0:14:4:0,4,62	0/0:8,0:8:3.01:0,3,119	0/0:19,0:19:18.01:0,18,334	0/0:21,0:21:12.04:0,12,377	0/0:21,0:21:15.05:0,15,491	1/1:10,3:12:3.01:102,3,0	1/1:31,8:39:2.61:101,3,0	./.	0/0:17,0:17:15.93:0,16,319	0/0:19,0:19:23.05:0,23,627	0/0:9,0:8:6.02:0,6,208
chr10	9317267	.	C	CA	7420.80	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-7.812;DP=676;FS=0.000;HRun=2;HaplotypeScore=67.8527;InbreedingCoeff=0.9997;MQ=82.87;MQ0=0;MQRankSum=-3.818;QD=38.06;ReadPosRankSum=-1.175;VQSLOD=4.8631;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,31:33:75.25:1080,75,0	0/0:11,0:11:33.10:0,33,409	0/0:27,0:27:63.10:0,63,699	0/0:16,0:16:31.52:0,32,342	1/1:0,30:30:87.29:1253,87,0	1/1:0,16:16:39.13:562,39,0	1/1:1,15:16:39.13:562,39,0	1/1:3,41:44:99:1719,123,0	0/0:27,0:27:78.25:0,78,967	0/0:40,0:40:99:0,120,1488	0/0:22,0:22:66.21:0,66,818	0/0:24,0:24:69.20:0,69,843	0/0:20,0:20:57.18:0,57,707	0/0:25,0:25:69.22:0,69,855	0/0:23,0:23:66.21:0,66,818	1/1:0,23:23:69.23:994,69,0	0/0:23,0:23:69.19:0,69,840	1/1:0,11:11:33.11:475,33,0	0/0:22,0:22:66.21:0,66,818	0/0:30,0:30:81.25:0,81,1004	0/0:26,0:26:72.23:0,72,892	0/0:28,0:28:81.25:0,81,1003	0/0:22,0:22:66.20:0,66,812	0/0:21,0:21:57.18:0,57,706	1/1:2,20:22:54.18:778,54,0	0/0:34,0:34:99:0,102,1265	0/0:31,0:31:93.28:0,93,1140	0/0:9,0:9:27.08:0,27,334
chr10	9318350	.	C	CT	3615.41	PASS	AB=1.000;AC=33;AF=0.589;AN=56;BaseQRankSum=1.182;DP=368;FS=12.051;HRun=9;HaplotypeScore=59.6545;InbreedingCoeff=0.8340;MQ=71.61;MQ0=6;MQRankSum=-2.833;QD=14.82;ReadPosRankSum=0.792;VQSLOD=2.3345;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,5:14:12.92:135,13,0	0/0:2,0:2:3:0,3,26	0/1:36,0:11:2.29:2,0,84	0/0:44,0:18:13.18:0,13,127	1/1:4,10:14:15.04:164,15,0	1/1:8,5:13:21.53:233,22,0	1/1:11,9:17:30.30:296,30,0	1/1:4,16:20:30.59:441,31,0	0/0:15,0:15:32.97:0,33,282	1/1:5,11:16:22.72:222,23,0	1/1:2,2:4:11.69:101,12,0	0/0:8,0:8:14.98:0,15,127	0/0:6,0:6:17.94:0,18,146	0/0:7,0:7:18:0,18,156	1/1:2,11:13:24.06:261,24,0	1/1:3,5:7:9.02:98,9,0	0/0:14,0:13:29.98:0,30,260	1/1:3,13:14:19.60:203,20,0	1/1:8,8:14:33.06:353,33,0	1/1:6,5:10:27.07:295,27,0	1/1:2,8:9:24.06:265,24,0	0/0:4,0:4:3:0,3,26	1/1:4,7:11:12.03:133,12,0	1/1:1,10:11:24.06:265,24,0	1/1:8,2:9:15.44:150,15,0	0/0:6,0:6:8.98:0,9,78	0/0:13,0:13:23.99:0,24,208	0/0:5,0:5:2.99:0,3,26
chr10	9318366	.	TCTCC	T	383.49	PASS	AB=0.964;AC=15;AF=0.278;AN=54;BaseQRankSum=-0.317;DP=339;FS=34.986;HRun=0;HaplotypeScore=67.2745;InbreedingCoeff=-0.3626;MQ=56.98;MQ0=14;MQRankSum=-3.928;QD=2.72;ReadPosRankSum=1.273;VQSLOD=-0.5852;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:13,0:12:48.49:48,0,95	./.	0/0:51,0:8:7.87:0,8,252	0/0:42,0:13:16.40:0,16,211	0/0:9,1:10:11.91:0,12,101	0/1:9,0:9:22.68:23,0,29	0/1:18,0:15:88.82:89,0,96	0/0:13,0:13:31.26:0,31,191	0/1:12,0:12:22.34:22,0,281	0/1:14,0:14:50.74:51,0,137	0/1:3,0:3:38.79:39,0,41	0/1:9,0:8:11:11,0,105	0/1:7,0:7:4.85:5,0,124	0/1:6,1:6:15.34:15,0,46	0/0:12,0:12:5.08:0,5,258	0/1:5,0:4:6.20:12,0,6	0/0:16,0:14:30.80:0,31,322	0/1:14,0:11:18.95:19,0,50	0/0:13,0:11:22.80:0,23,207	0/1:10,0:10:22.50:53,0,22	0/0:11,1:9:22.91:0,23,139	0/0:1,0:1:2.90:0,3,16	0/1:5,0:5:8.32:8,0,43	0/0:11,0:11:12.13:0,12,158	0/1:10,0:10:10.58:95,0,11	0/0:5,0:5:7.07:0,7,35	0/0:10,0:9:14.52:0,15,247	0/1:2,1:3:35.80:42,0,36
chr10	9318368	.	TCC	T	1763.28	PASS	AB=0.963;AC=35;AF=0.673;AN=52;BaseQRankSum=-2.969;DP=316;FS=7.958;HRun=2;HaplotypeScore=49.5360;InbreedingCoeff=0.1784;MQ=55.53;MQ0=14;MQRankSum=-2.225;QD=9.04;ReadPosRankSum=1.954;VQSLOD=0.4151;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,6:12:26.99:285,27,0	./.	0/0:50,0:8:3.72:0,4,169	0/0:40,0:11:26.80:0,27,216	./.	1/1:4,3:7:10.79:186,11,0	1/1:17,2:16:38.43:374,38,0	0/1:4,4:8:15.76:271,0,16	0/1:12,0:12:26.29:26,0,28	0/1:13,0:13:10.94:11,0,22	1/1:3,0:3:3.45:23,3,0	0/1:8,0:7:11:24,0,11	0/1:6,0:6:9.69:10,0,18	1/1:5,0:4:5.68:31,6,0	0/0:11,0:11:9.51:0,10,80	1/1:2,3:4:9:106,9,0	0/1:17,0:15:2.26:2,0,37	1/1:12,1:10:17.50:236,18,0	0/1:12,0:10:6.53:7,0,44	1/1:11,0:10:11.38:68,11,0	1/1:11,0:8:5.85:21,6,0	0/1:1,0:1:0:0,0,0	1/1:5,0:5:3.74:12,4,0	0/0:9,0:9:3.98:0,4,41	1/1:5,4:11:24.21:182,24,0	1/1:5,0:5:2.37:8,2,0	0/1:8,0:7:7.25:7,0,46	1/1:3,0:3:3:27,3,0
chr10	9318369	.	CCT	C	2371.87	PASS	AB=1.000;AC=46;AF=0.885;AN=52;BaseQRankSum=-4.551;DP=305;FS=16.781;HRun=0;HaplotypeScore=45.7400;InbreedingCoeff=0.3685;MQ=54.96;MQ0=14;MQRankSum=-2.192;QD=11.57;ReadPosRankSum=-0.177;VQSLOD=1.5996;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:11,1:12:18.56:116,19,0	./.	0/0:50,0:7:3.13:0,3,109	0/0:41,0:11:11.66:0,12,135	./.	1/1:6,1:7:15.30:99,15,0	1/1:18,2:17:28.53:186,29,0	0/1:8,0:8:2.27:113,0,2	1/1:11,0:11:25.20:193,25,0	1/1:10,2:12:13.41:134,13,0	1/1:2,0:2:5.99:48,6,0	1/1:8,0:7:5.09:51,5,0	0/1:5,0:5:3.22:63,0,3	1/1:5,0:4:8.22:56,8,0	1/1:8,3:11:13.55:126,14,0	1/1:5,0:4:8.81:54,9,0	1/1:16,0:15:33.20:222,33,0	1/1:12,0:9:14.34:106,14,0	1/1:9,1:8:8.96:71,9,0	1/1:9,2:10:23.37:171,23,0	1/1:10,1:8:20.98:178,21,0	1/1:1,0:1:3:27,3,0	1/1:3,2:5:8.97:73,9,0	1/1:3,5:8:17.49:139,17,0	1/1:11,0:11:21.83:104,22,0	1/1:5,0:5:6:54,6,0	1/1:7,0:6:6.37:78,6,0	1/1:2,0:2:3:28,3,0
chr10	9318370	.	CT	C	2606.22	PASS	AB=0.889;AC=47;AF=0.904;AN=52;BaseQRankSum=-4.810;DP=300;FS=8.011;HRun=1;HaplotypeScore=40.6278;InbreedingCoeff=0.4792;MQ=53.28;MQ0=14;MQRankSum=-1.268;QD=12.84;ReadPosRankSum=1.489;VQSLOD=1.9260;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,0:12:19.46:109,19,0	./.	0/0:48,0:6:3.87:0,4,87	0/0:39,1:11:11.77:0,12,134	./.	1/1:7,0:7:17.26:99,17,0	1/1:17,2:16:32.84:199,33,0	0/1:7,1:8:2.01:113,0,2	1/1:11,0:11:29.36:229,29,0	1/1:12,0:12:21.44:170,21,0	1/1:3,0:3:8.81:57,9,0	1/1:6,2:7:8.80:75,9,0	1/1:5,0:5:8.44:88,8,0	1/1:5,0:4:8.38:52,8,0	1/1:11,0:11:28.85:201,29,0	1/1:5,0:4:8.81:54,9,0	1/1:16,0:15:36.51:260,37,0	1/1:12,0:9:14.09:99,14,0	1/1:9,0:7:8.96:71,9,0	1/1:11,0:10:22.12:166,22,0	1/1:11,0:8:20.98:178,21,0	1/1:1,0:1:3:27,3,0	1/1:5,0:5:8.97:73,9,0	1/1:7,0:7:17.59:139,18,0	1/1:11,0:11:21.09:96,21,0	1/1:5,0:5:6:54,6,0	1/1:7,0:6:14.12:93,14,0	1/1:2,0:2:2.96:19,3,0
chr10	9318435	.	TCTAC	T	4016.33	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=9.612;DP=370;FS=4.073;HRun=0;HaplotypeScore=65.1981;InbreedingCoeff=0.9811;MQ=51.19;MQ0=13;MQRankSum=-5.852;QD=38.62;ReadPosRankSum=-0.538;VQSLOD=3.0231;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,16:18:36.12:662,36,0	0/0:10,0:10:27.09:0,27,713	0/0:32,0:7:18.06:0,18,454	0/0:38,0:16:39.13:0,39,960	1/1:0,9:9:20.84:386,21,0	1/1:1,7:8:18.06:331,18,0	1/1:3,13:12:27.09:496,27,0	1/1:5,19:22:48.11:818,48,0	0/0:6,0:6:18.06:0,18,475	0/0:12,0:12:33.11:0,33,863	0/0:6,0:6:18.06:0,18,441	0/0:13,0:13:39.13:0,39,1029	0/0:9,0:9:24.08:0,24,602	0/0:12,0:12:36.12:0,36,928	0/0:11,0:11:33.11:0,33,872	1/1:0,5:5:15.05:276,15,0	0/0:22,0:22:60.16:0,60,1525	1/1:1,11:10:30.10:552,30,0	0/0:9,0:8:15.05:0,15,395	0/0:6,0:6:15.05:0,15,395	0/0:15,0:15:42.14:0,42,1084	0/0:9,0:9:21.07:0,21,555	0/0:9,0:9:24.08:0,24,632	0/0:12,1:13:33.11:0,33,871	1/1:2,9:11:26.69:495,27,0	0/0:11,0:11:30.05:0,30,679	0/0:18,0:18:54.19:0,54,1381	0/0:5,0:5:15.05:0,15,396
chr10	9318558	.	TC	T	6321.30	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=9.420;DP=610;FS=0.000;HRun=3;HaplotypeScore=60.9532;InbreedingCoeff=0.9967;MQ=87.47;MQ0=0;MQRankSum=-3.714;QD=32.09;ReadPosRankSum=0.622;VQSLOD=4.7845;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,42:43:99:1375,111,0	0/0:9,0:9:24.08:0,24,345	0/0:21,0:21:62.26:0,62,755	0/0:27,0:27:74.60:0,75,1012	1/1:2,12:14:36.05:426,36,0	1/1:1,17:18:42.13:521,42,0	1/1:1,37:37:96.30:1190,96,0	1/1:0,37:36:99:1248,102,0	0/0:25,0:25:72.24:0,72,1036	0/0:18,0:18:51.16:0,51,711	0/0:13,0:13:33.11:0,33,467	0/0:19,0:18:51.16:0,51,712	0/0:11,0:11:27.09:0,27,389	0/0:23,0:23:66.22:0,66,950	0/0:34,0:34:99:0,102,1449	1/1:0,20:20:57.18:707,57,0	0/0:38,0:38:99:0,102,1403	1/1:0,14:13:36.11:446,36,0	0/0:14,0:14:39.13:0,39,561	0/0:24,0:24:69.15:0,69,944	0/0:32,0:32:90.28:0,90,1259	0/0:18,0:18:45.15:0,45,647	0/0:16,0:16:48.14:0,48,651	0/0:21,0:21:63.21:0,63,904	1/1:0,13:13:33.10:409,33,0	0/0:27,0:27:78.24:0,78,1086	0/0:18,0:18:54.18:0,54,777	0/0:5,0:5:15.05:0,15,216
chr10	9318844	.	CCTCTCTCTCT	C	2543.85	PASS	AB=0.972;AC=28;AF=0.700;AN=40;BaseQRankSum=1.514;DP=519;FS=12.861;HRun=0;HaplotypeScore=139.9564;InbreedingCoeff=-0.0712;MQ=58.65;MQ0=44;MQRankSum=1.902;QD=7.71;ReadPosRankSum=2.698;VQSLOD=1.7944;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:23:17.76:18,0,40	1/1:10,0:10:6.02:172,6,0	./.	./.	1/1:22,1:22:8.82:156,9,0	1/1:16,0:15:15.05:424,15,0	./.	0/0:32,0:32:4.95:0,5,21	1/1:16,2:17:3.01:49,3,0	0/1:16,0:13:59.39:66,0,59	./.	./.	1/1:12,2:14:6.02:169,6,0	1/1:18,0:19:9.03:230,9,0	0/0:17,0:16:0:0,0,0	1/1:11,0:10:7.91:81,8,0	0/1:26,2:24:65.43:298,0,65	0/1:15,0:13:35.90:46,0,36	0/1:27,0:26:42.62:43,0,89	1/1:10,0:10:6.02:148,6,0	./.	1/1:21,1:22:6.02:175,6,0	./.	0/1:20,0:18:4.50:5,0,17	./.	1/1:15,3:16:9.55:332,10,0	0/1:17,1:17:67.42:254,0,67	0/1:8,0:5:0:0,0,0
chr10	9318897	.	CTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	C	4812.79	PASS	AB=0.822;AC=16;AF=0.308;AN=52;BaseQRankSum=6.555;DP=487;FS=11.642;HRun=0;HaplotypeScore=254.2972;InbreedingCoeff=0.3977;MQ=34.81;MQ0=72;MQRankSum=-2.561;QD=25.46;ReadPosRankSum=4.672;VQSLOD=2.1619;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:26:4.42:0,4,34	1/1:8,2:9:2.90:228,3,0	./.	./.	0/0:16,0:17:9.95:0,10,111	0/0:9,0:10:6.02:0,6,67	0/0:22,0:15:2.29:0,2,7	0/0:12,0:9:20.96:0,21,460	1/1:13,8:18:8.66:600,9,0	0/0:24,0:22:44.36:0,44,3191	0/0:11,0:11:12.04:0,12,1261	1/1:14,7:17:15.05:855,15,0	1/1:12,6:16:14.85:1126,15,0	1/1:9,6:14:2.02:226,2,0	0/0:16,0:15:18.53:0,19,1423	0/0:10,0:13:9.37:0,9,125	0/1:28,6:22:83.21:124,0,83	0/1:10,0:11:99:140,0,253	0/1:18,0:18:0.21:0,0,420	0/0:15,0:18:9.47:0,9,198	0/0:20,0:11:0.81:0,1,2	0/0:16,8:24:0:0,0,1	0/0:9,0:11:0:0,0,0	0/0:25,0:22:24.08:0,24,2098	0/0:5,0:11:0.47:0,0,1	1/1:12,2:11:5.92:459,6,0	0/1:14,7:20:99:1053,0,215	0/0:13,0:4:0:0,0,0
chr10	9319164	.	G	GCC	20208.72	PASS	AB=0.950;AC=33;AF=0.589;AN=56;BaseQRankSum=-11.000;DP=638;FS=2.119;HRun=1;HaplotypeScore=75.8546;InbreedingCoeff=0.9454;MQ=84.43;MQ0=0;MQRankSum=-1.837;QD=49.41;ReadPosRankSum=1.265;VQSLOD=4.9044;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,46:50:99:2412,129,0	0/0:10,0:10:30.10:0,30,459	0/0:12,0:12:33.08:0,33,434	0/0:30,0:30:81.11:0,81,1123	1/1:1,19:20:54.19:1041,54,0	1/1:1,20:21:60.21:1159,60,0	1/1:0,32:33:90.31:1739,90,0	1/1:5,15:20:42.14:798,42,0	0/0:16,0:16:48.16:0,48,730	1/1:2,23:27:81.22:1417,81,0	1/1:0,13:13:36.12:695,36,0	0/0:18,0:18:54.18:0,54,825	0/0:28,0:28:78.24:0,78,1164	0/0:22,0:22:66.22:0,66,1008	1/1:0,38:38:99:2027,105,0	1/1:0,15:16:42.14:811,42,0	0/0:35,0:35:99:0,102,1485	1/1:1,14:15:39.13:754,39,0	1/1:1,23:24:69.24:1328,69,0	1/1:0,11:11:27.09:521,27,0	1/1:0,41:41:99:2260,117,0	0/0:19,0:19:48.14:0,48,684	1/1:0,12:12:27.09:519,27,0	1/1:0,24:23:69.24:1332,69,0	1/1:0,24:24:72.25:1391,72,0	0/1:18,1:19:3.81:4,0,706	0/0:34,0:34:99:0,102,1557	0/0:5,0:5:15.02:0,15,204
chr10	9320434	.	G	GTTTT	6612.38	PASS	AB=1.000;AC=20;AF=0.357;AN=56;BaseQRankSum=3.242;DP=617;FS=15.674;HRun=5;HaplotypeScore=143.0829;InbreedingCoeff=0.6934;MQ=72.93;MQ0=0;MQRankSum=-9.000;QD=25.24;ReadPosRankSum=-2.407;VQSLOD=0.6486;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:12,7:22:60.11:1048,60,0	0/0:10,0:10:30.07:0,30,450	0/0:30,0:29:72.11:0,72,1040	0/0:21,0:21:53.89:0,54,821	1/1:3,19:24:54.07:1012,54,0	1/1:2,15:19:33.11:747,33,0	1/1:5,9:16:30.03:624,30,0	1/1:22,6:28:48.76:770,49,0	0/0:20,0:20:51.11:0,51,749	0/1:29,0:29:95.57:96,0,236	0/0:27,0:27:43.97:0,44,311	0/0:21,0:21:54.13:0,54,800	0/0:21,0:21:60.18:0,60,953	0/0:23,0:23:63.21:0,63,1054	0/0:20,0:20:52.63:0,53,283	1/1:2,17:23:45.15:1030,45,0	0/0:24,0:23:72.09:0,72,1103	1/1:2,11:15:15.05:361,15,0	0/1:23,0:23:56.12:56,0,184	0/1:24,0:24:23.50:23,0,214	0/1:13,0:13:9.56:10,0,121	0/0:23,0:23:63.17:0,63,994	0/0:22,0:22:44.10:0,44,247	0/0:16,0:16:45.73:0,46,243	1/1:3,21:24:33.11:836,33,0	0/0:32,0:32:90.28:0,90,1450	0/0:30,0:30:75.14:0,75,1104	0/0:15,0:15:42.14:0,42,694
chr10	9320439	.	TG	T	8333.59	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=16.479;DP=595;FS=7.237;HRun=1;HaplotypeScore=96.9970;InbreedingCoeff=0.9969;MQ=69.83;MQ0=0;MQRankSum=-3.468;QD=25.10;ReadPosRankSum=0.508;VQSLOD=4.3082;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:23,2:24:62.04:387,62,0	0/0:11,0:11:33.08:0,33,435	0/0:27,0:26:75.15:0,75,956	0/0:21,0:21:59.76:0,60,751	1/1:22,0:22:43.94:245,44,0	1/1:17,0:17:28.96:166,29,0	1/1:14,0:14:25.10:145,25,0	1/1:28,0:27:54.52:392,55,0	0/0:19,0:19:57.10:0,57,736	1/1:0,30:30:90.13:1133,90,0	1/1:0,26:26:72.15:961,72,0	0/0:19,0:19:57.18:0,57,795	0/0:21,0:21:63.17:0,63,846	0/0:23,0:23:69.22:0,69,967	1/1:0,21:21:60.16:816,60,0	1/1:20,0:20:42.89:238,43,0	0/0:25,1:25:36.54:0,37,965	1/1:13,0:13:14.21:76,14,0	1/1:0,22:22:66.19:873,66,0	1/1:1,23:24:66.10:850,66,0	1/1:0,12:12:33.11:458,33,0	0/0:23,0:23:69.18:0,69,929	1/1:0,20:20:54.18:753,54,0	1/1:0,17:17:48.16:670,48,0	1/1:21,0:21:33.21:170,33,0	0/0:31,0:31:93.30:0,93,1298	0/0:28,0:28:81.21:0,81,1096	0/0:14,0:14:42.14:0,42,599
chr10	9321599	.	A	ATG	9963.69	PASS	AB=0.678;AC=48;AF=0.857;AN=56;BaseQRankSum=-1.416;DP=664;FS=0.926;HRun=0;HaplotypeScore=176.6147;InbreedingCoeff=0.1149;MQ=60.31;MQ0=8;MQRankSum=-2.232;QD=15.82;ReadPosRankSum=1.607;VQSLOD=5.0370;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:28:24:211,24,0	0/1:4,3:7:27.61:88,0,28	0/0:34,0:14:11.61:0,12,104	0/1:29,0:13:23.47:29,0,23	1/1:22,0:32:22.09:165,22,0	1/1:16,0:28:41.74:354,42,0	1/1:16,1:19:5.72:52,6,0	1/1:43,0:42:31.96:271,32,0	1/1:3,23:26:60.20:973,60,0	1/1:16,0:34:62.93:544,63,0	1/1:5,1:22:23.90:176,24,0	1/1:4,16:19:42.14:671,42,0	0/1:5,14:19:0.52:499,0,1	0/1:9,15:24:36.53:630,0,37	1/1:8,1:27:52.01:455,52,0	1/1:11,1:19:27.01:259,27,0	1/1:7,19:27:46.03:910,46,0	1/1:5,0:10:9:79,9,0	1/1:8,0:12:21.02:206,21,0	1/1:4,0:17:25.07:196,25,0	1/1:12,0:20:6:53,6,0	0/1:8,16:24:64.83:538,0,65	1/1:13,0:26:29.03:243,29,0	1/1:15,0:22:11.04:85,11,0	1/1:16,0:23:15:131,15,0	0/1:6,16:23:3.01:770,0,3	1/1:7,32:39:41.52:1180,42,0	1/1:0,8:8:12.04:195,12,0
chr10	9321615	.	GCA	G	1352.32	PASS	AB=1.000;AC=14;AF=0.250;AN=56;BaseQRankSum=2.405;DP=528;FS=1.005;HRun=0;HaplotypeScore=161.2362;InbreedingCoeff=0.7801;MQ=66.41;MQ0=8;MQRankSum=-3.609;QD=11.56;ReadPosRankSum=-0.870;VQSLOD=3.3694;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:14:21.28:142,21,0	0/0:4,0:4:9.03:0,9,131	0/0:37,0:15:35.48:0,35,476	0/0:33,0:16:13.22:0,13,247	0/1:22,0:22:12.56:167,0,13	1/1:21,0:20:30.42:215,30,0	1/1:10,0:10:14.12:145,14,0	1/1:0,19:19:56.70:571,57,0	0/0:22,0:22:66.21:0,66,859	0/0:23,0:23:65.87:0,66,827	0/0:19,0:19:44.82:0,45,562	0/0:18,0:18:45.14:0,45,574	0/0:17,0:17:42.14:0,42,571	0/0:19,0:19:53.91:0,54,705	0/0:26,0:26:60.87:0,61,782	0/1:14,0:14:8.14:165,0,8	0/0:24,0:24:69.01:0,69,879	1/1:4,0:4:8.43:44,8,0	0/0:11,0:10:27.09:0,27,405	0/0:20,0:20:44.62:0,45,586	0/0:11,0:11:9.03:0,9,112	0/0:21,0:21:51.17:0,51,726	0/0:20,0:20:46.92:0,47,601	0/0:19,0:19:23.77:0,24,326	1/1:13,0:13:15.89:90,16,0	0/0:20,0:20:60.19:0,60,827	0/0:39,0:39:96.29:0,96,1269	0/0:7,0:7:12.04:0,12,153
chr10	9325407	.	GGAGAGAGAGAGAGAGAGAGA	G	4651.38	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=5.313;DP=541;FS=15.675;HRun=0;HaplotypeScore=234.6058;InbreedingCoeff=0.8191;MQ=52.36;MQ0=10;MQRankSum=-4.593;QD=24.35;ReadPosRankSum=1.300;VQSLOD=2.4171;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:30:27.87:0,28,1852	0/0:7,0:7:3.01:0,3,217	0/0:25,0:13:6.02:0,6,150	0/1:45,0:18:0:0,0,0	0/0:20,0:20:11.65:0,12,800	0/0:22,0:21:18.90:0,19,940	0/0:10,0:14:9.50:0,10,566	0/0:16,0:16:24.08:0,24,876	0/0:18,0:18:21.86:0,22,1338	1/1:12,12:24:36.09:1416,36,0	1/1:8,4:12:9.03:478,9,0	0/0:21,0:21:37.68:0,38,2006	0/0:18,0:17:15.05:0,15,602	0/0:22,0:22:32.53:0,33,1696	1/1:13,6:19:9.03:480,9,0	0/0:13,0:19:27.09:0,27,1845	0/0:19,0:19:22.06:0,22,1124	0/0:7,0:12:21.07:0,21,1261	1/1:14,5:18:12.02:507,12,0	1/1:6,11:17:30.10:1051,30,0	1/1:14,14:28:6.02:168,6,0	0/0:16,0:16:6.02:0,6,215	1/1:7,1:8:6.01:187,6,0	1/1:15,4:19:9.03:363,9,0	0/0:15,0:24:14.22:0,14,1173	0/0:21,0:20:36.12:0,36,1774	0/0:18,0:18:21.07:0,21,1230	0/0:6,0:6:18.05:0,18,856
chr10	9325558	.	T	TACAC	6541.61	PASS	AB=0.664;AC=30;AF=0.536;AN=56;BaseQRankSum=-0.625;DP=670;FS=20.366;HRun=0;HaplotypeScore=196.6686;InbreedingCoeff=0.9049;MQ=55.33;MQ0=13;MQRankSum=-4.565;QD=16.11;ReadPosRankSum=-3.831;VQSLOD=2.2360;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:32:38.74:459,39,0	0/0:7,0:7:12.04:0,12,150	0/0:33,0:13:18.06:0,18,271	0/0:36,0:18:25.60:0,26,409	0/1:10,2:12:0:0,0,0	1/1:12,4:18:18.05:213,18,0	1/1:6,9:16:2.22:33,2,0	1/1:35,0:33:50.68:693,51,0	0/0:19,1:21:29.28:0,29,396	1/1:11,26:39:77.53:1449,78,0	1/1:6,17:23:9.59:97,10,0	0/0:18,0:18:26.89:0,27,311	0/0:15,0:15:24.06:0,24,306	0/0:22,0:22:30.10:0,30,407	1/1:28,1:29:34.24:570,34,0	1/1:17,3:19:39.11:639,39,0	0/0:20,0:20:36.07:0,36,465	1/1:12,1:12:14.57:130,15,0	1/1:8,14:19:41.96:631,42,0	1/1:15,14:30:14.87:210,15,0	1/1:40,1:42:39.09:633,39,0	0/0:30,0:29:54.16:0,54,743	1/1:22,1:23:22.79:375,23,0	0/1:5,22:27:0:0,0,0	1/1:13,7:19:30.08:410,30,0	0/0:5,0:24:56.99:0,57,619	0/0:21,0:22:31.95:0,32,551	0/0:13,0:13:27.06:0,27,337
chr10	9325590	.	GAGAGAGAC	G	3766.42	PASS	AB=1.000;AC=38;AF=0.731;AN=52;BaseQRankSum=-3.246;DP=634;FS=4.939;HRun=0;HaplotypeScore=235.9792;InbreedingCoeff=-0.3906;MQ=39.29;MQ0=24;MQRankSum=0.985;QD=6.16;ReadPosRankSum=-4.797;VQSLOD=1.3918;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:34,1:33:15.75:175,16,0	0/1:10,0:9:12.74:13,0,13	./.	./.	1/1:18,0:14:2.66:16,3,0	1/1:14,3:17:8.64:61,9,0	1/1:13,0:12:4.40:50,4,0	0/1:44,0:41:93.18:172,0,93	0/1:19,0:18:84.01:195,0,84	0/1:36,0:35:47.75:361,0,48	1/1:19,0:18:9.73:81,10,0	1/1:23,0:20:25.82:280,26,0	0/1:15,0:15:25.09:150,0,25	0/1:24,0:24:89.98:94,0,90	1/1:23,0:23:7.25:35,7,0	1/1:15,3:16:35.49:421,35,0	0/1:32,0:31:22.76:194,0,23	0/1:8,0:6:29.48:43,0,29	1/1:21,0:16:12.67:226,13,0	0/1:26,0:25:16.38:33,0,16	1/1:31,0:29:9.19:51,9,0	0/1:35,0:31:53.33:213,0,53	0/1:22,0:22:8.88:19,0,9	0/1:36,0:36:5.52:64,0,6	1/1:18,2:19:12.61:138,13,0	0/1:24,0:22:99:204,0,116	1/1:29,0:28:10.85:357,11,0	0/1:13,0:13:69.93:120,0,70
chr10	9325594	.	GAGAC	G	4240.96	PASS	AB=0.975;AC=48;AF=0.923;AN=52;BaseQRankSum=-3.207;DP=625;FS=3.605;HRun=0;HaplotypeScore=222.5456;InbreedingCoeff=-0.1252;MQ=39.42;MQ0=24;MQRankSum=3.308;QD=6.92;ReadPosRankSum=-3.172;VQSLOD=3.3661;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:35,0:34:21.80:155,22,0	1/1:10,0:9:2.96:19,3,0	./.	./.	1/1:20,0:16:2.59:16,3,0	1/1:17,0:17:8.77:61,9,0	1/1:14,0:13:1.71:62,2,0	0/1:42,0:39:89.87:175,0,90	1/1:19,0:18:5.70:149,6,0	1/1:36,0:35:10.55:374,11,0	1/1:20,0:19:12.32:85,12,0	1/1:23,0:20:41.59:349,42,0	1/1:15,0:14:10.66:161,11,0	0/1:23,0:23:5.45:135,0,5	1/1:23,0:23:5.36:31,5,0	1/1:19,0:17:35.14:265,35,0	1/1:30,0:29:39.84:354,40,0	1/1:8,0:6:4.75:24,5,0	1/1:21,0:16:6.05:154,6,0	1/1:25,2:26:11.60:81,12,0	0/1:30,2:30:5:39,0,5	1/1:34,2:32:36.65:354,37,0	1/1:23,1:24:6.31:43,6,0	1/1:33,0:33:14.98:123,15,0	1/1:19,0:18:12.27:90,12,0	0/1:22,1:21:14.63:321,0,15	1/1:31,0:29:53.38:409,53,0	1/1:13,0:13:30.49:213,30,0
chr10	9325596	.	GAC	G	5004.44	PASS	AB=0.982;AC=49;AF=0.942;AN=52;BaseQRankSum=-2.228;DP=627;FS=0.000;HRun=0;HaplotypeScore=210.8166;InbreedingCoeff=-0.0815;MQ=39.27;MQ0=22;MQRankSum=3.119;QD=8.07;ReadPosRankSum=-0.343;VQSLOD=4.3263;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:32,3:34:28.59:164,29,0	1/1:11,0:10:5.91:38,6,0	./.	./.	1/1:20,0:16:2.77:16,3,0	1/1:15,1:16:8.80:61,9,0	0/1:15,0:14:4.66:35,0,5	0/1:45,0:42:92.94:181,0,93	1/1:21,0:20:36.50:313,37,0	0/1:34,2:35:22.10:439,0,22	1/1:18,1:18:11.88:88,12,0	1/1:22,1:20:41.65:348,42,0	1/1:16,0:15:26.56:179,27,0	1/1:23,0:23:28.19:211,28,0	1/1:19,4:23:5.47:31,5,0	1/1:16,3:17:38.23:240,38,0	1/1:31,1:31:30.89:318,31,0	1/1:7,2:7:9.27:59,9,0	1/1:17,0:13:14.73:236,15,0	1/1:25,2:26:11.83:110,12,0	1/1:31,3:32:9.01:68,9,0	1/1:36,0:32:40.72:396,41,0	1/1:20,4:24:6.45:69,6,0	1/1:32,0:32:14.97:124,15,0	1/1:19,0:18:11.73:76,12,0	1/1:22,0:20:50.12:383,50,0	1/1:31,1:30:71.55:585,72,0	1/1:14,0:13:33.07:237,33,0
chr10	9325598	.	CAGAGAG	C	1862.23	PASS	AB=0.962;AC=22;AF=0.423;AN=52;BaseQRankSum=-0.771;DP=626;FS=37.317;HRun=0;HaplotypeScore=255.1776;InbreedingCoeff=0.1932;MQ=39.26;MQ0=21;MQRankSum=-0.483;QD=5.02;ReadPosRankSum=-0.987;VQSLOD=1.4649;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:29:11.24:30,0,11	0/0:12,0:11:3.01:0,3,35	./.	./.	0/0:20,0:17:0.16:0,0,1	0/0:14,0:15:0.46:0,0,1	0/1:15,0:14:4.06:13,0,4	0/0:22,0:41:16.71:0,17,198	0/0:20,0:19:4.51:0,5,149	1/1:30,6:35:50.28:795,50,0	1/1:18,1:18:9.72:132,10,0	0/0:22,0:19:2.17:0,2,15	0/0:16,0:15:2.68:0,3,55	0/0:23,0:23:11.57:0,12,155	1/1:8,16:24:0.28:0,0,0	0/1:16,0:16:7.59:97,0,8	0/1:32,0:31:39.07:64,0,39	0/1:8,0:7:19.41:19,0,34	1/1:17,1:14:14.71:344,15,0	1/1:27,1:27:10.18:124,10,0	0/1:32,1:31:9.56:87,0,10	0/0:38,0:34:4.79:0,5,164	0/0:10,14:24:1.92:0,2,7	1/1:33,0:33:15.03:219,15,0	1/1:18,0:18:3.74:39,4,0	0/1:22,1:21:48.57:49,0,209	0/1:33,0:31:0.70:1,0,126	0/0:15,0:14:18.42:0,18,143
chr10	9325662	.	C	CACAGAGAGAG	2106.84	PASS	AB=0.987;AC=15;AF=0.268;AN=56;BaseQRankSum=-2.112;DP=790;FS=0.000;HRun=0;HaplotypeScore=297.2978;InbreedingCoeff=0.7520;MQ=67.14;MQ0=7;MQRankSum=-3.505;QD=9.80;ReadPosRankSum=-3.170;VQSLOD=1.5538;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:6,19:32:2.63:140,3,0	0/0:18,0:17:45.97:0,46,1073	0/0:43,0:28:16.60:0,17,338	0/1:71,0:50:12.19:12,0,476	0/0:11,20:32:4.62:0,5,10	1/1:4,13:19:4.64:274,5,0	1/1:12,0:12:12.03:170,12,0	1/1:27,0:25:36.10:679,36,0	0/0:18,0:18:27.09:0,27,788	0/0:32,0:32:68.75:0,69,1684	0/0:18,0:18:35.21:0,35,811	0/0:33,0:32:55.41:0,55,1521	0/0:31,0:30:57.18:0,57,1589	0/0:23,0:23:44.96:0,45,1258	0/0:42,0:42:77.24:0,77,2080	1/1:6,12:19:12.04:585,12,0	0/0:34,0:33:62.76:0,63,1633	1/1:2,4:7:3.01:148,3,0	0/0:32,0:30:54.06:0,54,1111	0/0:26,0:26:54.94:0,55,1303	0/0:33,0:33:43.44:0,43,1006	0/0:28,0:28:52.08:0,52,1074	0/0:26,0:26:51.40:0,51,1194	0/0:38,0:38:44.75:0,45,1123	1/1:4,14:21:3.55:271,4,0	0/0:24,0:24:39.13:0,39,1061	0/0:33,0:32:58.07:0,58,1475	0/0:9,0:9:15.03:0,15,333
chr10	9325711	.	CAG	C	5524.35	PASS	AB=0.955;AC=21;AF=0.375;AN=56;BaseQRankSum=6.896;DP=756;FS=13.035;HRun=0;HaplotypeScore=185.9267;InbreedingCoeff=0.9086;MQ=71.46;MQ0=7;MQRankSum=1.195;QD=23.81;ReadPosRankSum=6.524;VQSLOD=4.2721;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:50.76:0,51,826	1/1:2,15:16:32.89:412,33,0	0/0:51,0:31:44.51:0,45,592	0/0:88,1:36:13.57:0,14,260	0/0:25,0:25:36.11:0,36,599	0/0:21,0:21:36.12:0,36,602	0/0:20,0:20:42.13:0,42,688	0/0:38,0:38:87.20:0,87,1376	1/1:5,11:16:33.11:432,33,0	0/0:33,0:33:72.25:0,72,1215	0/0:17,0:17:17.95:0,18,309	1/1:5,24:29:54.18:709,54,0	1/1:6,19:25:51.16:664,51,0	1/1:5,15:20:39.02:489,39,0	0/0:33,0:33:54.18:0,54,916	0/1:20,1:21:18.04:18,0,425	1/1:6,23:28:51.11:649,51,0	0/0:7,0:7:9.03:0,9,153	0/0:25,0:23:51.17:0,51,871	0/0:26,0:26:54.07:0,54,812	0/0:31,0:31:36.05:0,36,607	1/1:4,13:16:20.90:276,21,0	0/0:21,0:21:33.09:0,33,498	0/0:30,0:30:45.09:0,45,765	0/0:16,1:16:21.04:0,21,357	1/1:7,19:26:65.88:828,66,0	1/1:4,23:27:66.21:850,66,0	1/1:0,5:5:15.05:197,15,0
chr10	9325731	.	AAGACAGAGAG	A	2158.11	PASS	AB=0.963;AC=26;AF=0.464;AN=56;BaseQRankSum=-1.479;DP=661;FS=0.515;HRun=0;HaplotypeScore=251.0334;InbreedingCoeff=0.1934;MQ=64.56;MQ0=9;MQRankSum=2.040;QD=5.95;ReadPosRankSum=2.687;VQSLOD=2.1975;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:44.77:0,45,612	0/1:11,0:11:34.12:34,0,64	0/0:37,0:20:6.84:0,7,67	0/0:77,0:28:10.42:0,10,67	0/0:19,0:19:21.04:0,21,327	0/0:22,0:22:30.05:0,30,540	0/0:21,0:21:30:0,30,414	0/0:39,0:39:62.85:0,63,616	0/1:17,0:17:18.42:78,0,18	1/1:12,12:24:51.03:893,51,0	0/1:6,9:15:7.72:17,0,8	0/1:25,0:25:59.01:143,0,59	0/1:24,0:24:31.74:32,0,178	0/1:20,0:20:68.71:69,0,105	1/1:15,10:25:8.94:78,9,0	0/0:20,0:19:36:0,36,448	0/1:27,0:27:58.03:58,0,170	0/0:6,0:6:12.04:0,12,245	1/1:22,0:19:11.99:167,12,0	1/1:15,2:17:8.86:173,9,0	1/1:24,0:24:6.02:169,6,0	1/1:18,0:17:5.57:47,6,0	1/1:10,2:12:2.98:39,3,0	1/1:22,3:25:17.62:204,18,0	0/0:19,0:18:21.07:0,21,415	0/1:25,0:25:90.85:91,0,253	0/1:27,0:26:17.34:17,0,306	0/1:5,0:5:33.63:38,0,34
chr10	9325749	.	GAGAGAC	G	2605.73	PASS	AB=0.997;AC=27;AF=0.482;AN=56;BaseQRankSum=6.346;DP=667;FS=12.167;HRun=0;HaplotypeScore=213.6722;InbreedingCoeff=0.2157;MQ=51.89;MQ0=18;MQRankSum=-0.463;QD=5.92;ReadPosRankSum=0.620;VQSLOD=1.4668;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:43:7.87:0,8,442	0/1:8,0:8:8.97:68,0,9	0/0:28,0:10:2.81:0,3,22	0/1:72,0:15:0.53:1,0,53	0/0:24,0:24:26.86:0,27,324	0/0:21,0:21:32.97:0,33,435	0/0:25,0:25:29.86:0,30,286	0/0:38,0:37:50.90:0,51,579	1/1:16,1:17:4.02:136,4,0	0/1:27,1:28:99:402,0,265	0/1:16,0:16:35.50:36,0,82	1/1:20,1:21:21.02:264,21,0	1/1:16,1:17:34.14:241,34,0	1/1:18,0:18:19.78:121,20,0	0/1:19,0:19:12.02:12,0,42	0/0:20,0:19:26.45:0,26,381	1/1:25,0:25:37.15:188,37,0	0/0:6,0:6:11.99:0,12,204	0/1:22,0:15:75.54:86,0,76	0/1:22,0:22:97.68:109,0,98	0/1:31,0:30:43.75:67,0,44	1/1:17,1:18:5.88:48,6,0	0/1:11,0:11:19.11:19,0,48	0/1:28,0:28:99:118,0,202	0/0:20,0:19:24.05:0,24,352	1/1:29,0:28:44.83:483,45,0	1/1:32,1:32:49.79:347,50,0	0/1:5,0:5:1.08:47,0,1
chr10	9325751	.	GAGAC	G	5172.46	PASS	AB=0.983;AC=31;AF=0.554;AN=56;BaseQRankSum=4.535;DP=663;FS=13.257;HRun=0;HaplotypeScore=189.5190;InbreedingCoeff=0.0135;MQ=49.93;MQ0=20;MQRankSum=-0.964;QD=9.61;ReadPosRankSum=-0.426;VQSLOD=3.4841;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:42,0:41:51.30:51,0,354	1/1:6,3:9:16.60:163,17,0	0/0:27,0:9:3.56:0,4,23	0/1:69,0:13:4.05:4,0,55	0/0:23,0:23:9.12:0,9,197	0/0:21,0:21:21.70:0,22,388	0/0:26,1:27:29.80:0,30,282	0/1:37,2:38:99:126,0,461	1/1:12,4:16:23.81:219,24,0	0/1:27,0:27:99:304,0,303	0/1:15,0:15:35.46:35,0,97	1/1:16,5:21:41.98:479,42,0	1/1:11,7:18:41.98:524,42,0	1/1:12,6:18:20.89:256,21,0	0/1:16,0:16:11.97:12,0,43	0/1:21,0:20:33.06:33,0,309	1/1:19,8:27:44.40:594,44,0	0/0:6,0:6:7.63:0,8,177	0/1:19,0:12:62.82:90,0,63	0/1:22,0:22:99:101,0,152	0/1:31,0:30:26.05:26,0,115	1/1:16,5:21:11.85:97,12,0	0/1:11,0:11:18.90:19,0,66	0/1:29,0:29:99:134,0,310	0/0:19,1:19:1.95:0,2,271	1/1:23,6:28:70.42:856,70,0	1/1:22,11:32:69.48:934,69,0	0/1:4,1:5:8.78:115,0,9
chr10	9325753	.	GAC	G	4363.08	PASS	AB=0.933;AC=35;AF=0.625;AN=56;BaseQRankSum=5.788;DP=655;FS=10.587;HRun=0;HaplotypeScore=173.6863;InbreedingCoeff=-0.1760;MQ=47.98;MQ0=22;MQRankSum=-0.015;QD=8.14;ReadPosRankSum=-0.459;VQSLOD=3.3527;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:40,2:41:91.23:91,0,254	1/1:10,0:10:18.94:181,19,0	0/0:26,0:8:3.66:0,4,24	0/0:66,0:11:13.53:0,14,73	0/1:20,2:22:94.98:95,0,172	0/1:16,3:19:12.44:12,0,288	0/0:17,10:27:29.79:0,30,247	0/1:31,7:37:99:327,0,419	1/1:15,0:15:23.74:180,24,0	0/1:28,0:28:99:255,0,282	0/1:15,0:15:35.50:35,0,64	1/1:19,1:20:41.82:331,42,0	1/1:19,0:19:44.77:340,45,0	1/1:16,2:18:19.97:146,20,0	0/1:16,0:16:11.97:12,0,43	0/1:19,1:19:50.39:50,0,217	1/1:26,1:27:47.51:341,48,0	0/1:7,0:7:49.42:49,0,89	0/1:19,0:11:78.94:95,0,79	0/1:22,1:23:99:167,0,159	0/1:16,16:31:59.06:59,0,165	1/1:19,0:19:11.87:97,12,0	0/1:10,0:10:15.58:16,0,58	0/1:28,1:29:99:150,0,262	0/1:17,3:19:83.12:83,0,205	1/1:27,1:27:73.79:589,74,0	1/1:35,0:34:76.45:571,76,0	1/1:5,0:5:7.41:89,7,0
chr10	9327039	.	GTTATTTATTTATTTAT	G	9227.86	PASS	AB=0.590;AC=33;AF=0.589;AN=56;BaseQRankSum=-6.206;DP=487;FS=6.474;HRun=0;HaplotypeScore=207.3829;InbreedingCoeff=0.7171;MQ=59.18;MQ0=1;MQRankSum=-0.162;QD=26.59;ReadPosRankSum=2.045;VQSLOD=2.7248;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:7,23:30:36.12:1168,36,0	0/0:2,0:5:5.93:0,6,55	0/0:6,0:6:5.95:0,6,136	0/0:5,0:4:2.80:0,3,13	1/1:7,28:35:54.02:1289,54,0	1/1:5,13:18:27.09:968,27,0	1/1:4,6:10:6.02:126,6,0	1/1:16,0:30:35.96:508,36,0	0/0:5,0:17:15.05:0,15,212	1/1:31,0:31:42.21:1035,42,0	1/1:19,0:19:6.82:140,7,0	0/0:5,0:16:9.03:0,9,173	0/0:5,0:9:3.01:0,3,38	0/0:4,0:14:10.50:0,10,230	1/1:17,0:17:9.03:311,9,0	1/1:3,10:13:18.06:800,18,0	0/0:6,0:24:6.02:0,6,84	1/1:3,11:14:12.04:475,12,0	1/1:23,0:22:36.09:803,36,0	1/1:27,0:27:9.03:359,9,0	1/1:17,0:17:11.74:114,12,0	0/0:10,0:16:15.02:0,15,211	1/1:17,0:17:10.75:261,11,0	1/1:6,0:6:3.01:68,3,0	1/1:4,12:16:21.07:737,21,0	0/1:7,0:23:66.35:66,0,505	0/0:7,0:15:18.53:0,19,238	0/0:6,0:13:9.03:0,9,159
chr10	9327057	.	TATTTATTTATTTATTTATTC	T	7432.23	PASS	AB=1.000;AC=26;AF=0.464;AN=56;BaseQRankSum=3.252;DP=444;FS=16.635;HRun=0;HaplotypeScore=228.0453;InbreedingCoeff=0.3286;MQ=53.36;MQ0=2;MQRankSum=2.293;QD=22.66;ReadPosRankSum=4.593;VQSLOD=2.2200;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:30:99:344,0,265	0/0:3,0:3:6.02:0,6,157	0/0:2,0:2:5.95:0,6,136	0/0:3,0:2:2.80:0,3,13	0/1:31,0:31:99:558,0,262	0/1:16,0:16:99:326,0,146	0/1:10,0:10:5.60:6,0,238	0/1:21,0:19:99:460,0,173	0/0:16,0:16:27.09:0,27,880	1/1:4,28:32:71.76:1753,72,0	1/1:1,16:17:20.45:312,20,0	0/0:15,0:15:21.07:0,21,679	0/0:10,0:10:17.85:0,18,466	0/0:12,0:12:13.51:0,14,630	1/1:1,16:17:9.03:408,9,0	0/1:14,0:14:99:342,0,142	0/0:21,0:21:12.04:0,12,319	1/1:11,0:11:12:204,12,0	1/1:4,23:26:62.96:1060,63,0	1/1:3,27:30:33.84:671,34,0	1/1:12,0:12:11.45:114,11,0	0/0:10,0:10:20.96:0,21,455	1/1:0,19:19:17.90:446,18,0	1/1:0,5:5:3.01:88,3,0	0/1:15,0:15:99:281,0,157	0/1:21,0:21:59.70:60,0,1231	0/0:14,0:14:30.57:0,31,843	0/0:10,0:10:9.03:0,9,315
chr10	9328664	.	GGT	G	1428.32	PASS	AB=0.888;AC=27;AF=0.614;AN=44;BaseQRankSum=3.028;DP=516;FS=0.000;HRun=0;HaplotypeScore=80.1468;InbreedingCoeff=0.1943;MQ=69.76;MQ0=13;MQRankSum=0.286;QD=4.52;ReadPosRankSum=1.833;VQSLOD=1.8348;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,5:20:9.02:96,9,0	./.	./.	./.	./.	1/1:17,2:19:8.24:73,8,0	1/1:20,1:27:20.36:167,20,0	./.	1/1:16,6:22:23.83:225,24,0	0/0:13,0:13:6.02:0,6,87	0/0:14,0:14:3.01:0,3,44	1/1:19,7:26:2.16:224,2,0	1/1:24,2:26:9.02:96,9,0	0/1:8,5:13:31.95:84,0,32	0/1:12,1:12:23.12:23,0,79	1/1:7,2:10:11.70:92,12,0	1/1:21,3:25:14.03:133,14,0	0/1:12,3:16:5.11:96,0,5	./.	0/0:15,0:14:9.02:0,9,113	0/1:29,0:27:20.16:20,0,76	1/1:11,2:13:9.02:95,9,0	0/1:8,0:9:5.10:5,0,76	0/0:28,1:30:15.05:0,15,213	0/1:12,1:13:26.11:26,0,38	1/1:20,1:21:9.02:96,9,0	0/1:13,1:14:5.88:26,0,6	0/0:4,0:3:3.01:0,3,32
chr10	9328742	.	T	TG	6186.58	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=1.217;DP=437;FS=0.854;HRun=8;HaplotypeScore=143.9888;InbreedingCoeff=0.8875;MQ=63.94;MQ0=0;MQRankSum=-4.680;QD=15.78;ReadPosRankSum=3.875;VQSLOD=3.5339;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:23,1:24:33.38:272,33,0	1/1:4,4:8:14.99:145,15,0	0/0:21,0:20:35.99:0,36,323	0/0:24,0:22:33.44:0,33,295	1/1:18,0:20:10.64:72,11,0	1/1:11,0:11:20.42:152,20,0	1/1:20,0:20:23.08:145,23,0	1/1:23,0:22:48.45:270,48,0	1/1:8,13:21:42.11:472,42,0	1/1:16,0:17:46.65:321,47,0	1/1:10,0:10:8.88:58,9,0	1/1:8,15:21:46.74:532,47,0	1/1:5,9:15:32.97:332,33,0	1/1:5,12:17:39.05:417,39,0	1/1:14,0:15:20.75:143,21,0	1/1:9,0:9:17.90:139,18,0	1/1:5,13:19:42.57:473,43,0	1/1:9,0:9:16.15:131,16,0	1/1:9,0:9:20.49:123,20,0	1/1:13,0:13:23.81:174,24,0	1/1:28,0:29:43.17:301,43,0	1/1:4,6:10:21.04:227,21,0	1/1:11,0:11:14.90:114,15,0	1/1:21,0:21:30.24:219,30,0	1/1:7,0:7:11.95:95,12,0	1/1:4,9:13:39.08:421,39,0	1/1:2,11:13:29.84:301,30,0	1/1:1,4:5:12.04:138,12,0
chr10	9328743	.	G	GT	6954.22	PASS	AB=0.994;AC=45;AF=0.804;AN=56;BaseQRankSum=-0.182;DP=439;FS=0.576;HRun=1;HaplotypeScore=139.2206;InbreedingCoeff=0.2448;MQ=63.63;MQ0=0;MQRankSum=-5.358;QD=17.74;ReadPosRankSum=7.997;VQSLOD=4.8319;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,19:24:38.17:515,38,0	0/1:8,0:8:7.61:24,0,8	0/0:21,0:20:50.87:0,51,616	0/0:26,0:23:50.29:0,50,544	1/1:5,15:20:16.72:185,17,0	1/1:3,9:12:29.88:360,30,0	1/1:3,18:21:21.05:307,21,0	1/1:1,22:22:63.15:814,63,0	0/1:20,0:20:71.87:99,0,72	1/1:3,15:18:54.11:716,54,0	1/1:0,10:10:9.03:132,9,0	0/1:21,0:20:17.28:147,0,17	0/1:14,0:14:3.06:73,0,3	0/1:17,0:17:43.07:85,0,43	1/1:1,13:14:21.06:306,21,0	1/1:2,7:9:18.06:274,18,0	0/1:20,0:20:14.37:95,0,14	1/1:2,7:10:26.56:309,27,0	1/1:0,9:9:24.06:330,24,0	1/1:0,13:13:24.55:351,25,0	1/1:2,28:30:43.84:656,44,0	1/1:10,0:10:13.88:56,14,0	1/1:1,9:10:15.05:218,15,0	1/1:0,20:20:32.21:454,32,0	1/1:3,5:8:15.02:199,15,0	1/1:12,1:13:28.81:137,29,0	0/1:13,0:13:1.28:70,0,1	1/1:4,0:4:10.36:41,10,0
chr10	9328760	.	G	GA	124.35	PASS	AB=0.920;AC=4;AF=0.071;AN=56;BaseQRankSum=3.025;DP=452;FS=3.058;HRun=0;HaplotypeScore=170.8828;InbreedingCoeff=-0.0759;MQ=51.75;MQ0=2;MQRankSum=-2.995;QD=2.11;ReadPosRankSum=-6.196;VQSLOD=0.8443;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:38.80:0,39,509	0/0:7,0:7:21.07:0,21,293	0/0:26,0:18:28.08:0,28,516	0/0:26,0:15:28.47:0,28,348	0/0:20,0:20:37.32:0,37,495	0/1:13,0:13:7.95:8,0,372	0/0:17,0:17:45.03:0,45,576	0/1:22,1:20:23.32:23,0,680	0/0:17,0:17:51.15:0,51,693	0/0:21,1:22:32.58:0,33,773	0/0:15,0:15:21.40:0,21,353	0/0:26,0:24:69.23:0,69,959	0/0:12,0:12:30.10:0,30,415	0/0:18,0:18:48.16:0,48,669	0/0:15,0:15:31.33:0,31,527	0/0:6,1:7:15.05:0,15,206	0/0:15,0:18:38.99:0,39,545	0/1:8,5:13:99:165,0,232	0/1:10,0:10:33.57:34,0,210	0/0:12,0:12:33.11:0,33,457	0/0:22,2:25:41.18:0,41,623	0/0:13,0:13:30.08:0,30,419	0/0:9,0:9:18.04:0,18,230	0/0:17,0:18:27.08:0,27,360	0/0:7,0:7:21.03:0,21,259	0/0:19,0:19:54.15:0,54,733	0/0:11,0:11:27.09:0,27,376	0/0:6,0:6:18.06:0,18,252
chr10	9328769	.	A	ATGTGTGTG	10124.18	PASS	AB=0.602;AC=37;AF=0.661;AN=56;BaseQRankSum=-9.084;DP=499;FS=5.746;HRun=0;HaplotypeScore=186.0638;InbreedingCoeff=0.5985;MQ=48.81;MQ0=6;MQRankSum=-4.937;QD=28.44;ReadPosRankSum=-4.943;VQSLOD=2.9863;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:20,6:27:16.28:445,16,0	0/0:1,0:8:20.34:0,20,111	0/0:32,0:15:5.97:0,6,69	0/0:31,0:13:10.45:0,10,63	1/1:5,12:22:24.07:862,24,0	1/1:6,10:18:24.07:877,24,0	1/1:14,8:23:39.13:1222,39,0	1/1:22,3:22:15.05:403,15,0	0/0:3,0:14:34.94:0,35,249	1/1:22,1:24:42.13:1163,42,0	1/1:15,0:15:33.11:1077,33,0	0/0:7,0:24:27.37:0,27,241	0/0:5,0:14:9.13:0,9,235	0/0:4,0:18:18.41:0,18,188	1/1:14,0:14:18.05:507,18,0	1/1:5,2:7:9.03:300,9,0	0/1:7,0:19:26.34:26,0,80	1/1:13,1:14:23.57:672,24,0	1/1:10,0:9:9.02:195,9,0	1/1:12,0:12:15.05:532,15,0	1/1:26,0:27:14.59:241,15,0	0/1:5,0:18:0.26:0,0,161	1/1:11,0:11:14.59:473,15,0	1/1:19,0:19:15.03:440,15,0	1/1:3,9:15:12.04:503,12,0	0/1:6,0:20:99:147,0,144	0/1:2,0:9:4.12:4,0,86	0/1:3,0:6:33.30:33,0,49
chr10	9328786	.	T	TGTGTGTGC	10996.26	PASS	AB=0.995;AC=28;AF=0.500;AN=56;BaseQRankSum=-5.195;DP=514;FS=3.925;HRun=0;HaplotypeScore=193.1594;InbreedingCoeff=0.3728;MQ=61.80;MQ0=7;MQRankSum=-5.574;QD=34.15;ReadPosRankSum=-1.649;VQSLOD=4.4078;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:31,0:30:99:347,0,102	0/0:9,0:9:26.97:0,27,225	0/0:28,0:8:5.04:0,5,110	0/0:38,0:19:16.09:0,16,106	0/1:26,0:26:16.89:714,0,17	0/1:17,0:17:19.74:722,0,20	0/1:22,0:22:47.66:774,0,48	0/1:21,0:18:99:698,0,138	0/0:16,0:16:44.96:0,45,439	1/1:16,5:24:69.11:1961,69,0	1/1:4,16:23:35.91:1223,36,0	0/0:24,0:22:37.88:0,38,467	0/0:15,0:15:18.98:0,19,397	0/0:19,0:19:22.97:0,23,349	1/1:5,7:12:21.02:583,21,0	0/1:8,0:8:12.89:227,0,13	0/0:15,0:15:26.31:0,26,225	1/1:16,0:16:13.71:794,14,0	1/1:13,0:12:3.74:474,4,0	1/1:6,5:11:18.02:618,18,0	1/1:22,1:24:17.42:203,17,0	0/0:19,0:19:27.71:0,28,325	1/1:9,4:13:15.01:469,15,0	1/1:13,2:16:15.02:390,15,0	1/1:16,0:16:11.14:429,11,0	0/1:21,1:22:99:340,0,341	0/0:9,0:9:11.74:0,12,191	0/1:7,0:7:29.97:30,0,102
chr10	9328958	.	T	TA	2993.85	PASS	AC=16;AF=0.296;AN=54;BaseQRankSum=-6.379;DP=345;FS=28.695;HRun=6;HaplotypeScore=58.7114;InbreedingCoeff=0.9598;MQ=60.45;MQ0=0;MQRankSum=-2.949;QD=26.73;ReadPosRankSum=-4.381;VQSLOD=0.8319;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,16:19:39.12:490,39,0	./.	0/0:4,0:4:9.02:0,9,89	0/0:3,0:3:5.99:0,6,53	1/1:2,15:17:32.94:373,33,0	1/1:1,8:9:21.02:244,21,0	1/1:1,10:11:30.05:359,30,0	1/1:4,27:31:84.26:1046,84,0	0/0:9,0:9:21.05:0,21,214	0/0:7,0:7:21.05:0,21,214	0/0:18,0:18:48.11:0,48,489	0/0:11,0:9:27.04:0,27,268	0/0:11,0:11:33.06:0,33,329	0/0:14,0:14:36.08:0,36,367	0/0:12,0:12:36.08:0,36,367	1/1:0,6:6:18.06:226,18,0	0/0:24,0:24:54.11:0,54,551	1/1:2,9:11:24.06:287,24,0	0/0:21,0:21:57.12:0,57,576	0/0:16,0:16:45.10:0,45,456	0/0:5,0:5:12.03:0,12,122	0/0:10,0:10:30.07:0,30,306	0/0:12,0:12:30:0,30,293	0/0:11,0:11:27.06:0,27,275	1/1:1,7:8:15.01:171,15,0	0/0:18,0:18:42.09:0,42,429	0/0:19,0:19:48.10:0,48,489	0/0:8,0:8:23.96:0,24,216
chr10	9330054	.	A	AT	15221.76	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-8.877;DP=635;FS=12.138;HRun=9;HaplotypeScore=60.3651;InbreedingCoeff=0.9257;MQ=85.93;MQ0=1;MQRankSum=-6.671;QD=25.63;ReadPosRankSum=4.247;VQSLOD=4.7075;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,15:16:10.04:339,10,0	1/1:0,12:12:36.10:398,36,0	0/0:21,0:22:44.02:0,44,369	0/0:18,0:19:28.70:0,29,238	1/1:7,30:37:98.61:1049,99,0	1/1:3,14:17:45.11:491,45,0	1/1:3,13:17:15.89:386,16,0	1/1:9,22:31:20.02:641,20,0	1/1:4,22:26:63.17:697,63,0	1/1:6,26:32:69.19:763,69,0	1/1:7,31:38:81.22:896,81,0	1/1:4,18:23:56.98:609,57,0	1/1:2,14:16:42.11:465,42,0	1/1:4,24:28:52.14:795,52,0	1/1:1,17:18:18.85:438,19,0	1/1:2,17:19:48.13:531,48,0	1/1:3,17:21:18.13:466,18,0	1/1:0,3:3:9.02:100,9,0	1/1:8,10:18:30.08:332,30,0	1/1:2,21:25:39.87:625,40,0	1/1:2,9:12:27.05:287,27,0	1/1:1,22:23:66.17:722,66,0	1/1:2,18:20:54.15:597,54,0	1/1:2,20:22:60.15:654,60,0	1/1:2,24:26:20.08:678,20,0	1/1:4,28:32:84.23:929,84,0	1/1:6,41:48:82.24:1135,82,0	1/1:5,8:13:18.05:199,18,0
chr10	9330789	.	TACAC	T	5268.90	PASS	AB=0.650;AC=14;AF=0.250;AN=56;BaseQRankSum=-8.721;DP=803;FS=4.190;HRun=0;HaplotypeScore=212.0247;InbreedingCoeff=0.7549;MQ=61.17;MQ0=4;MQRankSum=1.187;QD=21.25;ReadPosRankSum=1.498;VQSLOD=4.3054;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:29,21:49:7.33:1072,7,0	0/0:4,0:9:14.98:0,15,277	0/0:21,0:14:6.02:0,6,145	0/0:18,0:15:6.02:0,6,141	1/1:11,24:35:39.54:630,40,0	1/1:18,15:32:30.10:485,30,0	1/1:11,25:36:51.13:795,51,0	0/1:18,12:29:18.96:448,0,19	0/0:11,0:29:42.12:0,42,696	0/0:25,0:39:84.26:0,84,1503	0/0:12,0:34:45.13:0,45,756	0/0:5,0:26:42.14:0,42,751	0/0:9,0:20:24.08:0,24,409	0/0:8,0:27:57.20:0,57,1030	0/0:22,0:37:87.30:0,87,1590	1/1:7,23:30:63.21:1018,63,0	0/0:13,0:37:56.93:0,57,992	0/1:5,12:17:61.18:357,0,61	0/0:9,0:14:26.98:0,27,426	0/0:19,0:43:51.07:0,51,888	0/0:22,0:36:57.51:0,58,1441	0/0:12,0:28:57.15:0,57,921	0/0:9,0:28:48.11:0,48,771	0/0:18,0:28:54.18:0,54,997	1/1:3,13:17:30.09:464,30,0	0/0:11,0:34:87.30:0,87,1542	0/0:9,0:29:57.01:0,57,1012	0/0:2,0:12:15.05:0,15,263
chr10	9330981	.	CAT	C	2312.79	PASS	AB=0.995;AC=19;AF=0.339;AN=56;BaseQRankSum=16.537;DP=1171;FS=42.151;HRun=0;HaplotypeScore=328.7384;InbreedingCoeff=-0.3701;MQ=48.45;MQ0=24;MQRankSum=1.098;QD=3.14;ReadPosRankSum=3.278;VQSLOD=1.1393;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:51:31.63:0,32,1470	1/1:21,0:21:8.59:114,9,0	0/0:36,0:17:38.03:0,38,396	0/0:42,0:21:49.50:0,50,502	0/0:49,2:51:27.27:0,27,895	0/1:41,1:40:70.83:71,0,1044	0/1:60,0:57:29.74:30,0,1148	0/1:62,0:56:22.06:22,0,1497	0/1:42,1:43:57.41:245,0,57	0/1:66,1:62:99:192,0,1569	0/0:45,1:44:28.12:0,28,940	0/1:47,0:45:50.85:211,0,51	0/1:28,0:28:64.45:151,0,64	0/1:45,0:43:60.57:251,0,61	0/1:48,1:48:99:182,0,791	0/1:49,0:47:83.17:83,0,1241	0/1:29,0:29:46.84:124,0,47	0/0:14,0:14:14.97:0,15,586	0/0:39,0:30:17.72:0,18,715	0/0:43,1:44:46.54:0,47,1337	0/0:62,1:58:86.76:0,87,1459	0/1:37,0:37:99:143,0,149	0/1:38,0:38:70.24:70,0,614	0/0:45,1:44:40.09:0,40,877	0/1:34,0:34:74.08:74,0,735	0/1:39,0:38:99:238,0,176	0/1:32,0:32:71.66:188,0,72	0/1:15,0:15:58.68:89,0,59
chr10	9330983	.	TAC	T	6090.74	PASS	AB=0.995;AC=24;AF=0.429;AN=56;BaseQRankSum=7.849;DP=1178;FS=51.076;HRun=0;HaplotypeScore=327.3963;InbreedingCoeff=0.7217;MQ=48.11;MQ0=23;MQRankSum=4.272;QD=11.38;ReadPosRankSum=1.482;VQSLOD=3.1325;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:51:47.90:0,48,1137	1/1:1,19:20:32.87:412,33,0	0/0:35,0:17:24.78:0,25,287	0/0:40,0:21:31:0,31,416	0/0:50,0:50:47.26:0,47,751	0/0:40,0:38:20.92:0,21,810	0/0:61,0:58:16.29:0,16,810	0/0:63,1:57:65.53:0,66,1401	1/1:7,38:45:19.86:758,20,0	0/1:67,0:62:1.61:2,0,1369	0/0:46,0:44:35.92:0,36,673	1/1:7,37:42:60.11:715,60,0	1/1:6,22:28:36.11:444,36,0	1/1:11,33:42:69.22:862,69,0	0/1:49,0:48:67.06:67,0,623	0/1:48,1:47:19.33:19,0,997	1/1:7,20:28:22.96:411,23,0	0/0:14,0:14:19.59:0,20,440	0/0:42,0:33:43.77:0,44,742	0/0:47,0:46:72.18:0,72,1127	0/0:69,0:64:83.67:0,84,1260	1/1:10,26:37:46.98:545,47,0	0/1:41,0:41:3.97:4,0,437	0/0:47,0:45:48.05:0,48,719	0/0:34,0:34:0.90:0,1,516	1/1:25,13:37:36.90:939,37,0	1/1:7,22:30:51.09:604,51,0	1/1:4,10:15:26.30:307,26,0
chr10	9331037	.	CACACACACCACACACAGACAG	C	7111.67	PASS	AB=0.963;AC=17;AF=0.304;AN=56;BaseQRankSum=8.817;DP=1069;FS=55.818;HRun=0;HaplotypeScore=572.1920;InbreedingCoeff=-0.1499;MQ=52.55;MQ0=29;MQRankSum=-9.222;QD=10.87;ReadPosRankSum=-0.259;VQSLOD=-0.4984;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:27,4:29:29.81:498,0,30	0/0:21,0:21:42.14:0,42,2987	0/0:45,0:24:60.20:0,60,2178	0/0:44,0:23:50.98:0,51,1791	1/1:33,3:38:2.75:52,3,0	0/1:11,0:10:49.51:57,0,50	0/1:23,2:22:99:228,0,137	0/1:49,0:27:99:478,0,112	0/0:46,0:46:99:0,105,7246	0/1:71,3:73:99:2077,0,8097	0/1:49,1:49:99:342,0,2987	0/0:39,0:39:90.31:0,90,6396	0/0:35,0:35:81.28:0,81,6414	0/0:36,0:36:93.32:0,93,6873	0/1:35,1:36:99:327,0,1894	1/1:22,5:25:43.64:899,44,0	0/0:31,0:31:66.23:0,66,4985	0/0:5,0:5:6.02:0,6,246	0/1:32,3:29:99:1158,0,704	0/1:41,0:42:99:128,0,2794	0/1:90,1:89:99:107,0,10452	0/0:26,0:26:72.25:0,72,5724	0/1:52,0:55:99:165,0,4475	0/1:56,0:54:98.81:99,0,7884	0/1:19,3:22:99:499,0,499	0/0:41,0:40:99:0,111,8792	0/0:34,0:34:69.24:0,69,4478	0/0:12,0:12:24.08:0,24,2009
chr10	9331044	.	A	AT	2069.45	PASS	AB=0.748;AC=14;AF=0.250;AN=56;BaseQRankSum=10.786;DP=995;FS=58.258;HRun=0;HaplotypeScore=278.2192;InbreedingCoeff=-0.1482;MQ=54.27;MQ0=24;MQRankSum=-8.018;QD=4.78;ReadPosRankSum=-3.075;VQSLOD=1.2021;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:13,5:18:11.79:219,0,12	0/0:19,0:19:42.14:0,42,587	0/0:51,0:25:18.99:0,19,763	0/0:44,0:24:51.07:0,51,636	0/1:15,14:34:29.82:30,0,63	0/1:9,4:11:33.13:33,0,36	0/1:5,5:12:11.40:60,0,11	0/1:9,5:13:82.21:183,0,82	0/0:46,0:46:99:0,108,1451	0/1:57,13:72:99:530,0,1352	0/1:29,12:43:99:106,0,482	0/0:40,0:41:96.23:0,96,1300	0/0:35,0:35:87.22:0,87,1190	0/0:36,0:36:96.32:0,96,1342	0/1:28,2:36:95.66:96,0,401	1/1:15,9:23:9.71:266,10,0	0/0:30,0:30:72.24:0,72,1005	0/0:3,0:3:5.81:0,6,55	0/1:21,7:25:99:250,0,267	0/1:35,7:42:99:150,0,468	0/0:87,11:92:71.88:0,72,1746	0/0:25,0:25:72.24:0,72,1006	0/1:37,10:49:99:114,0,684	0/0:47,1:53:15.12:0,15,1316	0/1:11,4:19:72.54:192,0,73	0/0:38,0:38:99:0,114,1583	0/0:30,0:30:72.06:0,72,935	0/0:12,0:12:30.10:0,30,419
chr10	9331045	.	C	CTACACACACCA	7808.24	PASS	AB=0.899;AC=21;AF=0.375;AN=56;BaseQRankSum=15.416;DP=1004;FS=40.422;HRun=0;HaplotypeScore=400.7786;InbreedingCoeff=0.4397;MQ=54.10;MQ0=25;MQRankSum=-10.573;QD=14.65;ReadPosRankSum=-4.755;VQSLOD=1.5941;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:19,1:18:29.99:355,30,0	0/0:19,0:19:42.12:0,42,1352	0/0:52,0:26:57.69:0,58,1222	0/0:45,0:24:26.72:0,27,776	1/1:24,8:33:14.74:220,15,0	1/1:10,0:10:15.04:424,15,0	1/1:11,2:11:9.90:322,10,0	1/1:28,0:14:36.03:704,36,0	0/0:44,0:44:99:0,108,3184	0/1:72,4:75:99:2026,0,3256	0/1:44,2:45:99:254,0,1189	0/0:41,0:41:99:0,102,2844	0/0:36,0:36:87.23:0,87,2638	0/0:37,0:37:99:0,102,2923	0/1:36,0:36:99:226,0,818	1/1:22,2:22:36.67:731,37,0	0/0:32,0:32:72.17:0,72,2032	0/0:3,0:3:6.02:0,6,133	0/1:23,4:25:99:1279,0,294	0/1:37,5:43:99:280,0,1195	0/1:86,7:92:99:182,0,4143	0/0:26,0:26:72.17:0,72,2340	0/1:41,4:47:99:142,0,1834	0/0:55,0:54:42.96:0,43,3333	1/1:16,3:19:39.06:663,39,0	0/0:39,0:39:99:0,114,3831	0/0:30,0:30:72.08:0,72,1907	0/0:12,0:12:30.10:0,30,909
chr10	9331426	.	GGAGAGAGAGAGA	G	2285.99	PASS	AB=0.875;AC=24;AF=0.480;AN=50;BaseQRankSum=3.379;DP=655;FS=21.926;HRun=0;HaplotypeScore=235.9983;InbreedingCoeff=0.6202;MQ=56.71;MQ0=12;MQRankSum=-5.126;QD=7.40;ReadPosRankSum=-3.961;VQSLOD=0.7563;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:30,1:34:9.73:120,10,0	0/0:7,0:7:6.96:0,7,184	./.	./.	0/0:22,0:20:5.96:0,6,43	1/1:17,2:20:11.29:245,11,0	1/1:18,1:21:5.54:125,6,0	./.	0/0:22,0:23:18.05:0,18,391	1/1:30,1:33:18.03:461,18,0	1/1:13,2:15:5.86:60,6,0	0/0:15,0:18:8.30:0,8,218	0/0:15,0:15:26.96:0,27,570	0/0:16,0:21:20.96:0,21,561	1/1:14,2:17:5.56:106,6,0	1/1:8,5:14:9.03:155,9,0	0/0:15,0:20:27.96:0,28,659	1/1:15,9:24:18.06:592,18,0	1/1:14,2:16:5.22:304,5,0	0/0:20,0:22:0.87:0,1,3	0/1:41,1:39:99:100,0,144	0/0:17,0:17:12.51:0,13,353	0/1:17,5:24:22.67:54,0,23	1/1:24,3:27:5.34:93,5,0	1/1:19,0:19:3.01:50,3,0	0/0:22,0:22:21.07:0,21,595	0/0:12,0:18:21.05:0,21,666	0/0:18,0:18:12.02:0,12,288
chr10	9332499	.	GA	G	8121.57	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=14.369;DP=601;FS=2.458;HRun=10;HaplotypeScore=80.9116;InbreedingCoeff=0.9923;MQ=82.99;MQ0=1;MQRankSum=-1.685;QD=21.21;ReadPosRankSum=4.478;VQSLOD=5.5983;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:71.05:0,71,794	1/1:1,17:18:47.99:417,48,0	0/0:27,1:27:12.79:0,13,301	0/0:15,0:13:18.04:0,18,187	0/0:23,1:24:40.13:0,40,671	0/0:17,1:18:19.10:0,19,439	0/0:18,0:18:48.11:0,48,521	0/0:29,0:29:72.18:0,72,777	1/1:2,17:19:47.99:417,48,0	1/1:1,20:21:59.98:521,60,0	1/1:4,18:22:47.91:408,48,0	1/1:1,12:13:29.99:260,30,0	1/1:4,16:20:47.98:415,48,0	1/1:2,18:20:47.99:417,48,0	1/1:3,23:26:62.98:547,63,0	0/0:21,0:21:60.15:0,60,657	1/1:1,33:34:95.95:828,96,0	0/0:15,1:16:19.05:0,19,429	1/1:2,19:21:26.79:458,27,0	1/1:5,29:34:83.84:718,84,0	1/1:4,18:23:50.02:423,50,0	1/1:3,14:17:41.99:365,42,0	1/1:4,18:22:47.58:415,48,0	1/1:2,13:15:35.99:312,36,0	0/0:19,0:19:45.11:0,45,491	1/1:2,14:16:23.29:337,23,0	1/1:2,20:22:56.98:495,57,0	1/1:0,19:20:44.03:371,44,0
chr10	9333100	.	ATGGTGTTTTGT	A	11034.03	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=15.608;DP=740;FS=1.230;HRun=0;HaplotypeScore=241.5668;InbreedingCoeff=0.9896;MQ=75.61;MQ0=0;MQRankSum=-15.479;QD=60.63;ReadPosRankSum=0.484;VQSLOD=4.3101;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,25:39:56:1860,56,0	0/0:19,0:19:57.17:0,57,2866	0/0:23,0:23:54.19:0,54,2708	0/0:26,0:25:63.99:0,64,2574	1/1:6,16:22:39.13:1268,39,0	1/1:2,16:18:45.15:1518,45,0	1/1:9,5:14:12.04:405,12,0	1/1:15,15:30:45.15:1421,45,0	0/0:30,0:30:78.27:0,78,4239	0/0:33,0:33:78.27:0,78,4142	0/0:22,0:22:60.21:0,60,3132	0/0:29,0:29:87.28:0,87,4363	0/0:19,0:19:54.19:0,54,2802	0/0:35,0:35:93.30:0,93,4861	0/0:25,0:25:72.25:0,72,3822	1/1:4,18:22:54.19:1825,54,0	0/0:37,0:38:99:0,111,5850	1/1:3,6:9:12.04:406,12,0	0/0:24,0:24:57.19:0,57,2733	0/0:24,0:24:69.24:0,69,3631	0/0:39,0:39:99:0,102,5297	0/0:22,0:22:57.20:0,57,2818	0/0:21,0:21:60.21:0,60,3230	0/0:42,0:42:99:0,111,5946	1/1:3,25:28:69.24:2331,69,0	0/0:33,0:33:90.31:0,90,4897	0/0:32,0:32:90.31:0,90,4801	0/0:22,0:22:57.20:0,57,2987
chr10	9336730	.	TAC	T	70.09	PASS	AB=0.970;AC=13;AF=0.271;AN=48;BaseQRankSum=2.807;DP=827;FS=7.794;HRun=0;HaplotypeScore=193.6253;InbreedingCoeff=0.1016;MQ=51.93;MQ0=21;MQRankSum=-2.381;QD=0.26;ReadPosRankSum=-0.676;VQSLOD=1.9658;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:0.47:0,0,2	0/0:10,0:10:4.23:0,4,25	./.	./.	1/1:25,1:25:4.25:35,4,0	0/1:31,1:32:36.06:37,0,36	1/1:35,0:32:1.17:3,1,0	./.	./.	0/0:31,0:31:3:0,3,25	0/0:36,0:36:1.04:0,1,68	0/0:24,0:24:6.90:0,7,45	0/0:28,0:27:2.98:0,3,22	1/1:23,1:22:3.73:33,4,0	0/1:31,0:30:0.65:1,0,1	0/0:35,0:33:2.49:0,2,6	0/1:24,1:25:22.85:23,0,66	0/0:18,0:16:2.98:0,3,21	0/0:29,0:28:2.37:0,2,8	0/1:36,1:36:23.66:24,0,55	0/0:47,0:44:11.92:0,12,87	0/0:27,0:25:2.98:0,3,22	0/0:37,0:34:2.97:0,3,21	0/0:37,0:35:9.42:0,9,68	1/1:29,0:31:1.88:13,2,0	0/0:29,0:28:7.12:0,7,55	0/1:31,1:31:20:20,0,114	0/0:6,0:6:1.25:0,1,3
chr10	9336775	.	A	ATG	2333.68	PASS	AB=0.724;AC=22;AF=0.393;AN=56;BaseQRankSum=0.538;DP=608;FS=15.961;HRun=0;HaplotypeScore=161.6729;InbreedingCoeff=0.5069;MQ=53.22;MQ0=34;MQRankSum=-1.236;QD=8.02;ReadPosRankSum=1.800;VQSLOD=2.3590;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:39,0:39:20.01:338,20,0	0/1:1,5:6:4.82:50,0,5	0/0:47,0:17:22.69:0,23,569	0/0:48,0:22:57.40:0,57,774	0/0:25,0:24:26.73:0,27,359	0/0:19,0:18:25.92:0,26,333	0/0:21,0:19:42.07:0,42,596	0/0:17,0:15:33.11:0,33,502	0/1:21,0:21:14.23:14,0,210	0/0:16,0:15:36.12:0,36,552	0/0:19,0:19:16.25:0,16,229	0/1:6,12:19:7.88:107,0,8	0/1:11,10:20:12.84:99,0,13	0/0:28,0:27:41.74:0,42,484	0/0:20,0:19:23.33:0,23,316	1/1:10,0:9:6.12:119,6,0	0/1:26,1:27:12.36:563,0,12	1/1:9,2:9:23.97:321,24,0	1/1:1,9:11:29.41:463,29,0	0/1:5,17:22:12.28:12,0,13	1/1:11,27:37:10.58:187,11,0	1/1:5,12:18:6.03:69,6,0	1/1:4,15:16:1.69:59,2,0	1/1:6,21:25:7.79:124,8,0	0/0:13,0:12:14.83:0,15,201	0/0:19,0:17:49.83:0,50,680	0/0:19,0:18:14.41:0,14,454	0/0:6,0:6:17.85:0,18,233
chr10	9338913	.	AACACACACACAC	A	9784.29	PASS	AB=0.665;AC=27;AF=0.482;AN=56;BaseQRankSum=11.488;DP=645;FS=1.948;HRun=0;HaplotypeScore=249.9730;InbreedingCoeff=0.5459;MQ=55.25;MQ0=9;MQRankSum=-12.390;QD=26.59;ReadPosRankSum=2.391;VQSLOD=4.1807;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:24:36.12:0,36,1326	1/1:0,6:6:15.05:521,15,0	0/0:27,0:19:6.02:0,6,163	0/0:24,0:14:6.02:0,6,192	0/0:10,0:20:36.12:0,36,1314	0/0:17,0:30:69.24:0,69,2590	0/0:18,0:26:54.19:0,54,1947	0/0:18,0:24:43.37:0,43,1297	1/1:7,16:26:51.17:1684,51,0	0/1:13,0:25:28.87:29,0,376	1/1:10,0:19:10.78:59,11,0	1/1:5,16:21:33.11:1146,33,0	1/1:15,16:33:36.12:1204,36,0	1/1:9,16:26:42.14:1404,42,0	0/1:11,0:31:57.47:60,0,57	0/0:20,0:30:60.21:0,60,2328	1/1:7,9:17:15.05:469,15,0	0/0:6,0:18:27.09:0,27,957	0/0:12,0:18:9.26:0,9,240	0/1:15,0:22:32.48:32,0,293	1/1:13,0:23:3.03:21,3,0	0/1:12,11:23:6.91:478,0,7	1/1:7,0:19:9.41:43,9,0	0/0:15,0:17:0:0,0,0	0/0:12,0:16:33.11:0,33,1356	1/1:13,16:31:54.06:1429,54,0	0/1:8,15:23:61.04:894,0,61	1/1:14,8:21:9.03:313,9,0
chr10	9338988	.	C	CAGAG	4026.94	PASS	AB=0.999;AC=45;AF=0.804;AN=56;BaseQRankSum=-2.299;DP=902;FS=2.697;HRun=0;HaplotypeScore=226.7928;InbreedingCoeff=-0.0555;MQ=44.60;MQ0=37;MQRankSum=0.012;QD=4.58;ReadPosRankSum=3.786;VQSLOD=2.5166;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:13,23:39:38.57:791,39,0	0/1:14,0:13:0:0,0,0	0/1:98,0:14:11.02:11,0,18	0/1:152,0:26:12.52:13,0,126	1/1:15,8:24:11.78:229,12,0	1/1:8,18:29:10.70:227,11,0	1/1:11,11:23:17.42:312,17,0	1/1:35,0:35:21.31:181,21,0	1/1:28,0:27:3.48:36,3,0	0/1:25,0:26:67.07:67,0,258	0/1:23,0:23:91.82:116,0,92	1/1:22,0:21:5.71:81,6,0	1/1:26,0:23:2.66:20,3,0	1/1:20,0:18:5.95:44,6,0	0/1:32,0:32:48.89:185,0,49	1/1:7,19:29:20.81:439,21,0	1/1:23,0:21:9.44:70,9,0	1/1:18,2:20:27.07:444,27,0	1/1:17,0:16:16.58:146,17,0	1/1:28,0:27:3.09:25,3,0	0/1:25,0:24:70.20:70,0,115	1/1:23,0:21:9:104,9,0	0/0:22,0:21:1.84:0,2,68	0/1:19,0:19:33.69:34,0,141	1/1:9,6:19:11.78:229,12,0	1/1:34,0:34:16.71:112,17,0	0/1:30,0:29:1.18:36,0,1	1/1:17,0:17:2.70:8,3,0
chr10	9339013	.	A	AGC	3840.88	PASS	AB=0.987;AC=36;AF=0.643;AN=56;BaseQRankSum=0.473;DP=875;FS=6.887;HRun=0;HaplotypeScore=176.4207;InbreedingCoeff=0.0532;MQ=56.74;MQ0=26;MQRankSum=2.848;QD=6.54;ReadPosRankSum=4.536;VQSLOD=2.7067;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:43,0:43:29.89:30,0,177	0/1:12,0:11:1.58:95,0,2	0/0:88,0:18:11.84:0,12,224	0/0:136,0:39:48.29:0,48,722	0/1:14,0:14:13.40:13,0,82	0/1:30,0:30:2.77:3,0,122	0/1:21,0:21:17.87:18,0,148	0/0:31,0:31:75.65:0,76,633	1/1:27,0:26:14.96:147,15,0	0/1:24,0:26:99:125,0,252	1/1:21,0:23:5.14:205,5,0	1/1:26,0:25:2.25:138,2,0	1/1:18,0:15:11.49:108,11,0	1/1:22,0:20:23.86:204,24,0	1/1:32,0:35:11.34:289,11,0	0/0:33,0:33:4.20:0,4,202	1/1:24,0:22:23.49:203,23,0	0/1:15,0:15:33.46:33,0,124	1/1:19,2:21:18.45:522,18,0	1/1:8,16:27:10.75:99,11,0	1/1:27,0:28:3.50:373,3,0	1/1:26,0:24:31.71:270,32,0	0/1:23,0:23:5.24:102,0,5	0/1:20,0:21:36.70:109,0,37	0/1:17,0:17:8.98:9,0,105	0/1:32,0:32:75.30:301,0,75	1/1:33,0:32:31.42:332,31,0	0/1:21,0:21:82.14:111,0,82
chr10	9339729	.	AGTGTGT	A	1362.03	PASS	AB=0.667;AC=13;AF=0.241;AN=54;BaseQRankSum=0.044;DP=527;FS=0.783;HRun=0;HaplotypeScore=123.0101;InbreedingCoeff=0.6169;MQ=57.43;MQ0=8;MQRankSum=-2.511;QD=8.90;ReadPosRankSum=-1.783;VQSLOD=2.3050;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:21,18:40:11.40:133,0,11	0/0:8,0:13:12.02:0,12,178	0/0:28,0:14:3.01:0,3,49	0/0:21,0:14:6.02:0,6,87	0/0:10,5:16:2.98:0,3,43	1/1:9,9:19:6.91:126,7,0	1/1:3,8:14:9.92:188,10,0	1/1:22,7:29:25.61:286,26,0	0/0:14,0:22:9.03:0,9,198	0/0:8,0:14:21.74:0,22,486	0/0:8,0:11:6.02:0,6,99	0/0:9,0:22:6.02:0,6,127	0/0:13,0:14:8.59:0,9,111	0/0:10,0:18:6.02:0,6,130	0/0:11,0:18:18.06:0,18,520	1/1:1,15:16:27.09:558,27,0	0/0:9,0:20:15.05:0,15,401	1/1:11,4:16:8.70:115,9,0	0/0:9,0:12:15.01:0,15,261	0/0:15,0:21:3.01:0,3,79	0/0:13,0:27:9.03:0,9,163	./.	0/0:9,0:14:6.70:0,7,233	0/0:8,0:24:32.98:0,33,877	1/1:5,12:17:6.02:124,6,0	0/0:11,0:14:11.55:0,12,295	0/0:12,0:23:18.05:0,18,350	0/0:2,0:11:9.03:0,9,213
chr10	9340219	.	A	AAT	5126.42	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-6.030;DP=357;FS=11.226;HRun=0;HaplotypeScore=79.7909;InbreedingCoeff=0.9038;MQ=81.36;MQ0=0;MQRankSum=-2.898;QD=34.41;ReadPosRankSum=-2.020;VQSLOD=6.0395;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,8:12:24.08:396,24,0	0/0:6,0:6:15.05:0,15,191	0/0:15,0:15:33.11:0,33,419	0/0:8,0:7:9.03:0,9,114	1/1:6,13:19:0.93:550,1,0	1/1:8,21:29:69.22:1061,69,0	1/1:2,4:6:9.03:151,9,0	1/1:6,20:27:24.95:883,25,0	0/0:10,0:10:27.09:0,27,344	0/0:7,0:7:21.07:0,21,267	0/0:16,0:16:42.09:0,42,516	0/0:5,0:5:12.04:0,12,153	0/0:9,0:9:24.08:0,24,306	0/0:12,0:12:27.09:0,27,344	0/0:9,0:9:18.06:0,18,229	1/1:3,6:9:21.07:346,21,0	0/0:10,0:10:27.09:0,27,344	1/1:5,15:21:51.17:830,51,0	0/0:16,0:16:36.11:0,36,458	0/0:9,0:9:24.08:0,24,306	0/0:7,0:7:12.04:0,12,153	0/0:4,0:4:9.03:0,9,115	0/0:16,0:16:30.08:0,30,368	0/0:4,0:4:9.03:0,9,115	1/1:9,17:25:25.01:910,25,0	0/0:13,0:13:39.12:0,39,497	0/0:12,0:12:27.07:0,27,330	0/0:19,0:19:57.17:0,57,708
chr10	9340283	.	CAT	C	8256.47	PASS	AB=1.000;AC=54;AF=0.964;AN=56;BaseQRankSum=-0.829;DP=328;FS=0.000;HRun=0;HaplotypeScore=78.1300;InbreedingCoeff=0.0583;MQ=70.80;MQ0=6;MQRankSum=-1.811;QD=25.17;ReadPosRankSum=2.643;VQSLOD=5.6383;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,9:10:21.07:269,21,0	1/1:1,2:3:6.02:77,6,0	0/1:11,0:7:19.44:19,0,36	0/1:34,0:16:4.12:4,0,62	1/1:3,16:18:42.14:539,42,0	1/1:3,27:30:69.22:885,69,0	1/1:0,1:1:3.01:39,3,0	1/1:10,13:23:45.14:578,45,0	1/1:2,9:11:18.06:232,18,0	1/1:2,7:8:21.07:270,21,0	1/1:2,14:16:33.11:424,33,0	1/1:0,3:3:9.03:116,9,0	1/1:1,3:4:9.03:116,9,0	1/1:1,6:7:12.04:154,12,0	1/1:1,9:9:18.06:231,18,0	1/1:1,5:6:15.05:192,15,0	1/1:0,18:17:45.15:579,45,0	1/1:3,14:17:39.13:500,39,0	1/1:2,13:15:36.10:449,36,0	1/1:0,4:4:12.04:154,12,0	1/1:1,3:4:6.02:77,6,0	1/1:0,1:1:3.01:39,3,0	1/1:0,6:6:15.05:192,15,0	1/1:0,1:1:3.01:39,3,0	1/1:1,13:14:39.13:501,39,0	1/1:2,13:14:33.11:425,33,0	1/1:1,15:16:4.59:500,5,0	1/1:2,18:20:51.16:656,51,0
chr10	9343154	.	CTGTG	C	3908.46	PASS	AB=0.837;AC=46;AF=0.852;AN=54;BaseQRankSum=1.359;DP=561;FS=1.826;HRun=0;HaplotypeScore=120.2853;InbreedingCoeff=-0.0671;MQ=65.52;MQ0=4;MQRankSum=-0.498;QD=7.75;ReadPosRankSum=1.031;VQSLOD=2.0969;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:29,17:46:4.56:223,5,0	0/1:4,0:3:0:0,0,0	./.	0/0:28,0:18:0.47:0,0,1	1/1:5,6:11:2.97:20,3,0	1/1:12,8:20:12:162,12,0	1/1:13,4:16:6.01:75,6,0	1/1:23,0:26:4.14:39,4,0	1/1:17,0:18:6.01:55,6,0	1/1:12,8:19:21.01:260,21,0	1/1:8,0:8:2.99:24,3,0	1/1:24,0:24:5.60:55,6,0	1/1:12,0:12:9.01:81,9,0	1/1:22,0:22:20.74:193,21,0	1/1:10,9:20:21.06:312,21,0	1/1:7,6:13:18.06:283,18,0	1/1:33,0:33:6.01:74,6,0	1/1:15,16:32:36.12:540,36,0	0/1:17,2:22:25.91:78,0,26	0/1:14,2:18:36.42:83,0,36	0/1:30,1:35:68.19:68,0,229	1/1:8,0:8:5.98:49,6,0	1/1:6,5:11:9.03:142,9,0	0/1:5,22:27:65.52:746,0,66	1/1:4,0:9:3:28,3,0	0/1:15,0:14:11.19:97,0,11	1/1:21,0:21:2.50:87,2,0	1/1:7,0:9:15:134,15,0
chr10	9343185	.	TGTGTGTGTGC	T	1674.84	PASS	AB=0.976;AC=17;AF=0.304;AN=56;BaseQRankSum=7.718;DP=582;FS=3.675;HRun=0;HaplotypeScore=172.9676;InbreedingCoeff=0.4986;MQ=54.52;MQ0=8;MQRankSum=-6.571;QD=8.68;ReadPosRankSum=3.154;VQSLOD=2.6521;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:74.80:0,75,919	0/1:5,0:4:10.71:50,0,11	1/1:8,0:1:1.55:4,2,0	0/0:21,0:4:8.99:0,9,86	0/0:12,0:12:20.92:0,21,260	0/0:18,0:18:26.60:0,27,344	0/0:23,0:22:43.97:0,44,622	0/0:21,0:20:43.70:0,44,390	1/1:16,1:17:6.02:81,6,0	0/0:20,0:19:53.19:0,53,803	0/0:7,0:7:10.32:0,10,131	0/1:26,0:25:34.36:112,0,34	1/1:16,0:16:9.03:120,9,0	1/1:22,2:24:20.67:403,21,0	0/0:17,0:17:11.62:0,12,446	0/0:12,0:12:33.80:0,34,393	0/1:35,1:36:11.94:127,0,12	0/0:30,0:30:16.06:0,16,641	0/0:16,0:16:45.63:0,46,877	0/0:23,0:23:57.29:0,57,979	0/0:45,0:44:99:0,110,2760	1/1:10,1:11:5.62:133,6,0	0/0:12,0:12:21.84:0,22,298	0/0:39,0:39:93.07:0,93,1790	0/0:23,0:23:40.97:0,41,567	0/1:17,2:19:26.30:443,0,26	0/1:18,0:18:4.91:160,0,5	1/1:13,0:13:15.03:218,15,0
chr10	9343187	.	TGTGTGTGC	T	2867.04	PASS	AB=0.909;AC=25;AF=0.446;AN=56;BaseQRankSum=5.244;DP=562;FS=4.962;HRun=0;HaplotypeScore=148.2621;InbreedingCoeff=0.5457;MQ=55.96;MQ0=7;MQRankSum=-5.322;QD=11.24;ReadPosRankSum=1.322;VQSLOD=2.4872;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:24.75:0,25,589	1/1:3,0:3:8.98:116,9,0	1/1:8,0:1:1.55:4,2,0	0/0:20,0:4:5.48:0,5,63	0/0:12,0:12:20.91:0,21,213	0/0:17,0:17:7.53:0,8,186	0/0:21,0:20:39.24:0,39,512	0/1:20,0:19:49.97:50,0,202	1/1:3,13:16:6.02:173,6,0	0/0:20,0:19:53.16:0,53,593	0/1:7,0:7:10.71:11,0,85	0/1:4,21:24:8.81:144,0,9	1/1:0,17:17:9.03:256,9,0	1/1:3,20:23:20.91:563,21,0	0/1:16,0:16:44.68:45,0,258	0/0:12,0:12:29.27:0,29,221	1/1:4,30:34:6.02:148,6,0	0/1:29,0:29:5.98:6,0,275	0/0:17,0:17:49.56:0,50,729	0/0:23,0:23:46.86:0,47,678	0/0:47,0:46:99:0,119,2082	1/1:1,10:11:5.80:146,6,0	0/0:10,0:10:20.92:0,21,211	0/0:40,0:40:96.05:0,96,1276	0/0:22,0:22:32.35:0,32,424	1/1:14,2:16:43.81:567,44,0	1/1:0,17:17:20.90:452,21,0	1/1:3,10:13:15.05:383,15,0
chr10	9344976	.	AT	A	2988.38	PASS	AB=0.545;AC=19;AF=0.339;AN=56;BaseQRankSum=-2.034;DP=473;FS=15.257;HRun=10;HaplotypeScore=70.1068;InbreedingCoeff=0.9196;MQ=71.79;MQ0=0;MQRankSum=1.360;QD=18.11;ReadPosRankSum=1.085;VQSLOD=2.9287;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:30:59.96:0,60,319	1/1:0,11:11:26.99:234,27,0	0/0:15,0:14:18.23:0,18,161	0/0:9,0:6:5.89:0,6,90	0/0:4,0:31:77.23:0,77,413	0/0:4,0:12:28.72:0,29,164	0/0:1,0:10:25.72:0,26,137	0/0:9,0:33:71.37:0,71,376	1/1:2,9:11:23.98:208,24,0	0/0:13,0:13:39.06:0,39,412	0/0:18,0:18:42.10:0,42,456	1/1:4,20:24:26.81:462,27,0	1/1:1,11:12:26.99:234,27,0	1/1:2,16:18:41.98:364,42,0	0/0:7,0:7:12.03:0,12,133	0/0:1,1:14:8.20:0,8,130	1/1:3,23:26:59.98:521,60,0	0/0:1,1:22:20.84:0,21,191	0/0:11,0:11:27.05:0,27,288	0/0:27,0:28:78.03:0,78,835	0/0:10,0:10:24.05:0,24,257	1/1:1,16:17:41.94:358,42,0	0/0:11,0:11:30.06:0,30,316	0/0:16,0:16:36.10:0,36,398	0/0:3,0:18:45.93:0,46,267	0/1:4,19:24:1.36:431,0,1	1/1:2,11:13:23.99:208,24,0	1/1:1,8:9:20.98:182,21,0
chr10	9345043	.	CA	C	1914.52	PASS	AB=0.909;AC=17;AF=0.304;AN=56;BaseQRankSum=0.813;DP=447;FS=7.709;HRun=10;HaplotypeScore=91.8690;InbreedingCoeff=0.8517;MQ=77.36;MQ0=3;MQRankSum=-0.452;QD=14.84;ReadPosRankSum=1.676;VQSLOD=3.6325;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:47.66:0,48,478	0/0:10,0:10:18.05:0,18,199	0/0:29,0:17:8.54:0,9,100	0/1:18,1:12:38.26:38,0,41	0/0:23,0:23:54.10:0,54,571	0/0:18,0:18:39.08:0,39,412	0/0:7,0:7:18.05:0,18,199	0/0:28,0:28:69.18:0,69,756	0/0:5,0:6:15.34:0,15,148	1/1:1,14:15:41.99:365,42,0	1/1:7,9:15:20.98:182,21,0	0/0:21,0:21:56.93:0,57,564	0/0:13,0:13:30.04:0,30,318	0/0:11,1:12:9.96:0,10,312	1/1:2,5:7:14.95:130,15,0	0/0:8,0:8:10.92:0,11,219	0/0:17,0:17:39.11:0,39,431	0/0:20,1:20:15.27:0,15,394	1/1:4,13:17:35.97:310,36,0	1/1:4,13:17:41.99:365,42,0	1/1:2,1:3:3:26,3,0	0/0:14,0:14:33.08:0,33,355	1/1:1,19:20:53.99:468,54,0	1/1:1,13:14:26.99:233,27,0	0/0:16,0:17:36.57:0,37,395	0/0:17,0:17:33.06:0,33,353	0/0:22,0:22:57.15:0,57,630	0/0:11,0:11:27.04:0,27,279
chr10	9345129	.	T	TGC	382.01	PASS	AB=0.909;AC=12;AF=0.222;AN=54;BaseQRankSum=5.143;DP=356;FS=4.944;HRun=0;HaplotypeScore=85.1566;InbreedingCoeff=0.4386;MQ=57.41;MQ0=18;MQRankSum=-2.866;QD=4.02;ReadPosRankSum=-0.272;VQSLOD=1.4289;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:18:30.45:0,30,345	1/1:8,0:7:2.94:18,3,0	0/0:12,0:10:16.66:0,17,165	./.	0/0:11,0:8:11.89:0,12,124	0/0:18,0:18:34.03:0,34,347	0/0:23,0:19:41.78:0,42,467	0/0:17,0:17:41.44:0,41,440	1/1:10,0:9:8.25:44,8,0	0/0:9,0:7:20.78:0,21,151	0/0:13,0:11:17.41:0,17,122	0/1:14,0:14:6.18:6,0,19	0/1:8,0:8:8.55:64,0,9	0/0:7,0:6:0.44:0,0,1	0/0:10,0:10:29.67:0,30,203	0/0:12,0:11:29.80:0,30,298	1/1:14,0:13:4.24:100,4,0	0/0:14,0:13:28.71:0,29,331	0/0:10,0:9:26.69:0,27,196	0/0:10,0:10:17.88:0,18,135	0/0:15,0:12:23.77:0,24,166	0/0:8,0:8:0.44:0,0,1	0/0:13,0:13:17.88:0,18,135	0/0:21,0:21:29.76:0,30,215	0/0:17,0:16:42.08:0,42,509	0/1:6,8:13:12.36:162,0,12	0/1:19,0:19:41.41:85,0,41	1/1:8,0:7:3.01:45,3,0
chr10	9345131	.	T	TGTGTGTGCGC	3544.92	PASS	AB=1.000;AC=22;AF=0.407;AN=54;BaseQRankSum=3.117;DP=363;FS=1.220;HRun=0;HaplotypeScore=134.7006;InbreedingCoeff=0.7510;MQ=57.89;MQ0=15;MQRankSum=-3.334;QD=24.79;ReadPosRankSum=-1.240;VQSLOD=3.1571;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:19:50.94:0,51,935	1/1:8,0:7:18.03:385,18,0	0/0:12,0:10:16.50:0,16,243	./.	0/0:7,0:6:12.04:0,12,301	0/0:17,0:17:41.31:0,41,916	0/0:23,0:19:44.25:0,44,1048	0/0:17,0:17:42.14:0,42,944	1/1:10,0:9:12.01:196,12,0	0/0:9,0:7:10.80:0,11,212	0/0:12,0:11:4.04:0,4,273	1/1:7,7:17:2.68:59,3,0	1/1:8,1:10:21.03:573,21,0	1/1:10,0:9:5.99:49,6,0	0/0:10,0:10:8.14:0,8,204	0/0:12,0:11:30.10:0,30,716	1/1:14,0:14:33.08:720,33,0	0/0:13,0:12:17.58:0,18,720	0/1:12,0:11:7.78:8,0,217	0/0:12,0:12:13.89:0,14,185	0/0:15,0:13:16.44:0,16,288	1/1:9,0:9:6.01:73,6,0	0/1:13,0:13:2.38:2,0,147	0/0:22,0:22:17.21:0,17,390	0/0:16,0:15:42.14:0,42,1196	1/1:12,0:12:24.07:464,24,0	1/1:16,0:19:36.09:906,36,0	1/1:7,0:6:6.02:109,6,0
chr10	9347568	.	TAA	T	5805.54	PASS	AB=0.974;AC=33;AF=0.589;AN=56;BaseQRankSum=3.008;DP=584;FS=8.877;HRun=2;HaplotypeScore=75.9407;InbreedingCoeff=0.6864;MQ=44.34;MQ0=29;MQRankSum=2.493;QD=18.26;ReadPosRankSum=8.304;VQSLOD=1.5377;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:71.86:0,72,991	1/1:0,7:8:18.05:265,18,0	0/0:29,0:15:28.30:0,28,404	0/0:26,0:16:45:0,45,487	0/0:28,0:26:61.11:0,61,841	0/0:41,0:40:45.92:0,46,1228	0/0:30,0:29:0.09:0,0,726	0/0:25,0:23:66.04:0,66,807	1/1:8,8:14:27.07:389,27,0	1/1:17,0:13:6.34:229,6,0	0/0:11,0:9:2.04:0,2,6	1/1:2,15:17:26.92:435,27,0	1/1:1,21:22:36.12:575,36,0	1/1:2,27:28:45.15:715,45,0	1/1:12,0:9:3.48:30,3,0	0/0:21,0:20:53.72:0,54,727	1/1:3,21:23:30.10:482,30,0	0/1:11,1:12:4.82:5,0,322	0/1:10,0:7:9.53:42,0,10	0/1:15,0:16:4.82:11,0,5	1/1:19,0:14:13.10:118,13,0	1/1:0,26:27:36.12:570,36,0	1/1:12,0:10:5.91:38,6,0	1/1:5,0:5:4.07:42,4,0	0/0:28,0:27:80.90:0,81,1264	1/1:4,19:21:52.94:655,53,0	1/1:3,20:20:36.12:577,36,0	1/1:0,15:16:39.13:627,39,0
chr10	9347569	.	AAC	A	2544.15	PASS	AB=0.979;AC=22;AF=0.407;AN=54;BaseQRankSum=8.114;DP=592;FS=6.981;HRun=0;HaplotypeScore=87.4051;InbreedingCoeff=0.5749;MQ=44.17;MQ0=28;MQRankSum=1.419;QD=8.54;ReadPosRankSum=4.808;VQSLOD=2.2675;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:43.89:0,44,598	1/1:8,0:8:17.86:156,18,0	0/0:29,0:14:9.03:0,9,134	0/0:27,0:15:12.04:0,12,171	0/0:29,1:28:4.93:0,5,496	0/1:41,1:40:27.69:28,0,783	0/1:28,2:30:19.50:19,0,537	0/0:24,0:22:24.04:0,24,313	1/1:18,0:15:23.19:182,23,0	0/0:18,0:13:5.66:0,6,69	0/0:11,0:9:3:0,3,27	1/1:19,0:17:26.78:216,27,0	1/1:23,0:22:35.98:317,36,0	1/1:30,0:28:45.02:411,45,0	0/0:14,0:9:0.68:0,1,20	0/0:21,0:20:30.10:0,30,441	1/1:24,0:23:29.97:253,30,0	0/1:11,0:11:21.42:21,0,126	0/0:12,0:8:11.98:0,12,112	0/0:15,0:16:26.73:0,27,188	0/0:18,0:14:11.96:0,12,95	1/1:27,0:27:36.05:342,36,0	./.	0/0:5,0:5:5.99:0,6,50	0/0:28,0:27:57.19:0,57,875	0/1:24,0:21:9.95:159,0,10	1/1:23,0:20:35.97:308,36,0	1/1:16,0:16:38.95:329,39,0
chr10	9348350	.	TA	T	2853.84	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=7.710;DP=424;FS=1.468;HRun=7;HaplotypeScore=38.3138;InbreedingCoeff=0.9302;MQ=63.35;MQ0=32;MQRankSum=2.179;QD=20.83;ReadPosRankSum=2.372;VQSLOD=2.7818;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:17:39.12:0,39,490	1/1:0,9:9:24.05:245,24,0	0/0:15,1:9:17.17:0,17,114	0/0:19,0:9:16.41:0,16,139	0/0:26,0:22:60.15:0,60,737	0/0:26,0:26:75.24:0,75,937	0/0:9,0:8:24.08:0,24,298	0/0:25,0:22:54.16:0,54,667	1/1:1,13:13:36.08:367,36,0	0/0:20,0:13:33.08:0,33,400	0/0:22,0:21:63.20:0,63,789	1/1:1,10:10:15.03:153,15,0	1/1:3,10:11:24.05:245,24,0	1/1:0,2:2:6.01:61,6,0	0/0:13,0:10:24.08:0,24,302	0/0:7,0:7:12.04:0,12,151	1/1:1,17:17:48.11:490,48,0	0/0:7,0:7:21.07:0,21,262	0/0:20,0:17:48.08:0,48,559	0/0:23,0:18:53.53:0,54,647	0/0:5,0:4:9.02:0,9,100	1/1:3,4:4:6.01:61,6,0	0/0:9,0:5:15.05:0,15,189	0/0:3,0:2:6.02:0,6,75	0/0:19,0:16:42.13:0,42,528	1/1:0,23:23:57.03:558,57,0	1/1:3,23:22:45.10:459,45,0	1/1:0,14:14:42.10:428,42,0
chr10	9349704	.	G	GA	7263.36	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-14.643;DP=669;FS=1.031;HRun=4;HaplotypeScore=64.0903;InbreedingCoeff=0.9996;MQ=86.01;MQ0=0;MQRankSum=-0.913;QD=36.50;ReadPosRankSum=1.141;VQSLOD=5.0110;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,105,1191	0/0:13,0:13:36.10:0,36,408	0/0:20,0:20:55.66:0,56,594	0/0:22,0:22:58.63:0,59,602	0/0:30,0:30:90.24:0,90,1011	0/0:22,0:22:66.17:0,66,738	0/0:23,0:23:60.15:0,60,670	0/0:23,0:23:57.16:0,57,647	0/0:22,0:22:57.16:0,57,647	1/1:2,37:39:99:1538,114,0	1/1:2,20:22:57.19:777,57,0	0/0:24,0:24:60.17:0,60,681	0/0:28,0:28:81.23:0,81,918	0/0:27,0:27:75.18:0,75,829	1/1:1,25:26:72.24:985,72,0	0/0:29,0:29:81.19:0,81,909	0/0:29,0:29:84.21:0,84,940	0/0:14,0:14:42.12:0,42,475	1/1:0,18:18:54.16:721,54,0	1/1:0,30:29:87.29:1190,87,0	1/1:1,20:21:51.17:698,51,0	0/0:28,0:28:81.23:0,81,918	1/1:1,20:21:51.16:698,51,0	1/1:2,20:22:48.16:657,48,0	0/0:23,0:23:66.19:0,66,749	0/0:22,1:23:25.13:0,25,665	0/0:23,0:23:69.20:0,69,782	0/0:10,0:10:30.09:0,30,340
chr10	9350219	.	TTG	T	7161.06	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=12.448;DP=683;FS=1.819;HRun=0;HaplotypeScore=87.1884;InbreedingCoeff=0.9999;MQ=83.07;MQ0=0;MQRankSum=-2.110;QD=34.59;ReadPosRankSum=3.297;VQSLOD=7.2340;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:69.24:0,69,1188	0/0:13,0:13:36.12:0,36,623	0/0:30,0:30:69.07:0,69,1143	0/0:31,0:31:71.04:0,71,1239	0/0:31,0:31:93.32:0,93,1604	0/0:29,0:29:81.25:0,81,1336	0/0:20,0:20:45.15:0,45,779	0/0:43,0:43:99:0,105,1735	0/0:18,0:18:54.18:0,54,930	1/1:0,23:23:69.19:886,69,0	1/1:0,28:28:78.26:1039,78,0	0/0:23,0:23:63.20:0,63,1064	0/0:22,0:22:54.14:0,54,876	0/0:17,0:17:48.15:0,48,803	1/1:0,26:26:60.20:799,60,0	0/0:24,0:24:72.23:0,72,1204	0/0:17,0:17:39.13:0,39,675	0/0:20,0:20:51.17:0,51,883	1/1:2,29:31:87.28:1142,87,0	1/1:3,30:33:84.22:1098,84,0	1/1:3,20:23:57.19:759,57,0	0/0:25,0:25:69.22:0,69,1162	1/1:1,24:25:60.07:799,60,0	1/1:2,16:18:48.16:639,48,0	0/0:26,0:26:75.25:0,75,1270	0/0:21,0:21:57.20:0,57,987	0/0:32,0:32:87.29:0,87,1485	0/0:10,0:10:30.10:0,30,506
chr10	9350591	.	GACATTTGCA	G	10415.33	PASS	AB=0.711;AC=20;AF=0.357;AN=56;BaseQRankSum=15.331;DP=542;FS=2.258;HRun=0;HaplotypeScore=162.1151;InbreedingCoeff=0.8394;MQ=80.31;MQ0=0;MQRankSum=-15.629;QD=70.85;ReadPosRankSum=3.636;VQSLOD=4.5862;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:81.24:0,81,3804	1/1:0,7:7:18.06:569,18,0	0/0:17,0:17:45.15:0,45,1989	0/0:17,0:17:31.27:0,31,1842	0/0:30,0:30:90.31:0,90,4452	0/0:30,0:29:90.31:0,90,4256	0/0:22,0:22:66.23:0,66,3165	0/0:37,0:37:99:0,105,4982	1/1:1,10:11:30.10:948,30,0	0/0:34,0:34:99:0,102,4888	0/0:36,0:36:99:0,105,5113	1/1:1,10:11:27.09:853,27,0	1/1:1,18:19:48.16:1509,48,0	1/1:2,5:7:15.05:474,15,0	0/0:15,0:15:45.15:0,45,2147	0/1:11,2:13:61.70:62,0,1324	1/1:1,13:14:39.13:1232,39,0	0/0:8,0:8:24.08:0,24,1191	0/0:23,0:23:69.23:0,69,3248	0/0:28,0:28:81.26:0,81,3756	0/0:10,0:10:30.10:0,30,1489	1/1:1,12:13:24.08:746,24,0	0/0:25,0:25:75.26:0,75,3640	0/0:10,0:10:30.10:0,30,1406	0/0:26,0:26:78.27:0,78,3855	0/1:4,16:20:99:1463,0,244	1/1:1,20:21:57.20:1801,57,0	1/1:1,10:11:24.08:758,24,0
chr10	9355355	.	C	CAAAT	3027.67	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=-9.333;DP=470;FS=5.561;HRun=0;HaplotypeScore=71.5237;InbreedingCoeff=0.8475;MQ=72.05;MQ0=1;MQRankSum=-0.430;QD=24.42;ReadPosRankSum=1.173;VQSLOD=2.7522;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:36.07:0,36,526	0/0:12,0:12:27.09:0,27,442	0/0:12,0:11:12.04:0,12,178	0/0:11,0:11:11.53:0,12,154	0/0:25,0:25:60.19:0,60,956	0/0:20,0:20:51.16:0,51,811	0/0:10,0:10:24.07:0,24,370	0/0:36,0:36:48.16:0,48,765	0/0:9,0:9:18.06:0,18,295	1/1:8,5:13:15.05:365,15,0	1/1:3,12:15:33.11:803,33,0	0/0:18,0:18:48.16:0,48,779	0/0:25,0:25:45.13:0,45,690	0/0:16,0:16:36.11:0,36,564	1/1:6,7:13:24.08:555,24,0	0/0:22,0:22:42.14:0,42,685	0/0:17,0:17:33.09:0,33,496	0/0:24,0:24:45.14:0,45,713	1/1:8,11:19:39.01:724,39,0	1/1:6,8:12:18.06:438,18,0	1/1:4,0:4:3.01:38,3,0	0/0:7,0:7:12.04:0,12,194	1/1:6,3:9:9.03:219,9,0	1/1:3,1:4:3.01:73,3,0	0/0:24,0:24:48.16:0,48,763	0/1:33,0:33:3.83:4,0,989	0/0:32,0:31:63.22:0,63,1029	0/0:7,0:7:21.07:0,21,344
chr10	9355939	.	CAT	C	1117.28	PASS	AB=0.855;AC=16;AF=0.286;AN=56;BaseQRankSum=7.639;DP=650;FS=5.829;HRun=0;HaplotypeScore=128.0291;InbreedingCoeff=-0.2395;MQ=50.93;MQ0=20;MQRankSum=-2.445;QD=3.40;ReadPosRankSum=-3.335;VQSLOD=1.4284;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:38:71.72:0,72,918	0/1:13,0:12:47.13:47,0,129	0/0:24,0:7:1.01:0,1,59	0/0:31,0:12:6.30:0,6,86	0/0:17,0:17:39.06:0,39,549	0/0:16,0:16:20.66:0,21,290	0/0:31,0:29:62.80:0,63,607	0/0:24,0:21:25.45:0,25,293	0/1:23,1:24:73.21:73,0,94	0/1:6,12:18:60.78:251,0,61	1/1:6,8:14:7.98:123,8,0	0/1:31,1:32:99:118,0,195	0/1:24,0:23:19.27:19,0,256	0/1:30,0:30:59.64:60,0,127	0/1:6,22:26:14.22:155,0,14	0/0:16,0:16:12.90:0,13,346	0/1:22,1:19:10.45:10,0,188	0/0:17,0:17:33.05:0,33,515	0/1:18,0:18:16.27:16,0,176	0/1:15,0:14:0.04:0,0,159	0/0:41,1:40:44.95:0,45,415	0/0:27,0:26:32.92:0,33,338	0/1:4,16:19:49.03:70,0,49	0/1:6,27:32:66.68:222,0,67	0/0:25,0:24:54.07:0,54,748	0/1:28,0:27:87.76:88,0,340	0/0:12,0:12:17.35:0,17,185	0/1:7,2:9:17.11:20,0,17
chr10	9355941	.	T	TAC	1263.23	PASS	AB=0.926;AC=30;AF=0.556;AN=54;BaseQRankSum=3.313;DP=647;FS=40.317;HRun=0;HaplotypeScore=133.9740;InbreedingCoeff=0.2029;MQ=49.74;MQ0=20;MQRankSum=-2.409;QD=2.90;ReadPosRankSum=-2.409;VQSLOD=0.4632;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:38:23.75:0,24,241	1/1:12,0:12:8.49:76,8,0	0/1:23,0:6:7.33:7,0,24	./.	0/0:16,0:16:9.02:0,9,103	0/0:16,0:16:11.24:0,11,106	0/0:31,0:29:18.79:0,19,229	0/0:23,0:20:0.81:0,1,76	1/1:24,0:24:3.16:35,3,0	0/1:18,0:18:65.74:66,0,85	0/1:11,0:11:8.45:36,0,8	1/1:30,0:30:17.97:164,18,0	1/1:24,0:23:8.01:133,8,0	1/1:32,0:32:6:103,6,0	0/1:29,0:26:33.41:33,0,47	0/0:16,0:16:6:0,6,52	1/1:24,0:20:2.49:22,2,0	0/0:17,0:17:11.93:0,12,108	1/1:16,2:18:6.02:87,6,0	0/1:9,6:14:26.39:39,0,26	0/1:25,19:43:19.92:40,0,20	1/1:26,0:25:2.88:34,3,0	0/1:22,0:21:10.80:70,0,11	0/1:33,0:32:95.37:178,0,95	0/0:24,0:23:21.01:0,21,217	1/1:29,0:28:12.98:162,13,0	1/1:12,0:12:10.48:126,10,0	1/1:8,0:8:2.99:24,3,0
chr10	9355969	.	C	CG	1904.10	PASS	AB=0.757;AC=32;AF=0.571;AN=56;BaseQRankSum=8.302;DP=581;FS=0.000;HRun=9;HaplotypeScore=132.7188;InbreedingCoeff=0.6089;MQ=55.67;MQ0=15;MQRankSum=-5.458;QD=5.33;ReadPosRankSum=-0.321;VQSLOD=0.6128;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:28,12:38:14.66:64,0,15	1/1:9,0:8:15.57:74,16,0	0/0:21,0:13:26.73:0,27,207	0/0:21,0:13:26.95:0,27,226	0/1:16,0:16:15.67:38,0,16	1/1:15,1:16:9.01:91,9,0	0/1:15,20:33:57.41:112,0,57	1/1:9,4:13:14.89:135,15,0	1/1:18,0:18:41.06:184,41,0	0/0:17,0:17:17.94:0,18,151	0/0:16,0:16:20.93:0,21,173	1/1:24,0:24:25.54:135,26,0	1/1:13,0:19:25.69:144,26,0	1/1:26,0:26:34.17:150,34,0	0/0:25,0:23:26.93:0,27,227	0/1:7,11:18:16.97:57,0,17	1/1:15,0:11:24.73:112,25,0	1/1:8,13:21:9.02:100,9,0	0/0:6,0:6:8.96:0,9,74	0/0:24,0:23:6.13:0,6,137	0/0:43,0:40:41.72:0,42,350	1/1:12,0:13:10.59:44,11,0	0/0:18,0:18:0.07:0,0,107	0/0:32,0:31:42.70:0,43,342	1/1:26,3:29:29.99:269,30,0	1/1:27,0:26:54.87:266,55,0	1/1:13,0:13:24.67:108,25,0	1/1:4,0:5:5.62:27,6,0
chr10	9355972	.	G	GT	1553.47	PASS	AB=1.000;AC=24;AF=0.429;AN=56;BaseQRankSum=11.637;DP=539;FS=6.268;HRun=0;HaplotypeScore=111.1948;InbreedingCoeff=0.6944;MQ=57.98;MQ0=11;MQRankSum=-8.280;QD=6.64;ReadPosRankSum=4.434;VQSLOD=3.2285;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:25.78:0,26,295	1/1:6,4:9:12.74:84,13,0	0/0:22,0:14:38.87:0,39,442	0/0:23,0:15:33.02:0,33,402	0/1:8,0:8:27.59:28,0,69	0/0:12,0:12:10.52:0,11,133	0/1:31,0:30:1.17:1,0,174	0/1:11,0:11:4.57:5,0,83	1/1:16,6:22:39.36:265,39,0	0/0:19,0:19:44.92:0,45,472	0/0:14,0:14:29.76:0,30,362	1/1:24,0:24:31.01:233,31,0	1/1:19,0:19:28.67:226,29,0	1/1:21,0:25:35.77:222,36,0	0/0:22,0:20:41.97:0,42,497	0/0:15,0:15:0.66:0,1,75	1/1:11,3:11:21.28:99,21,0	0/1:15,0:15:9.15:9,0,34	0/0:9,0:9:26.72:0,27,254	0/0:25,0:24:52.07:0,52,508	0/0:42,0:40:63.12:0,63,759	1/1:11,2:13:8.47:48,8,0	0/0:16,0:15:29.53:0,30,318	0/0:33,0:32:57.09:0,57,711	0/0:23,0:23:22.38:0,22,202	1/1:19,6:25:39.45:322,39,0	1/1:11,1:12:23.81:182,24,0	1/1:5,0:5:5.60:37,6,0
chr10	9355974	.	G	GT	1302.23	PASS	AB=0.793;AC=18;AF=0.321;AN=56;BaseQRankSum=10.636;DP=530;FS=0.000;HRun=0;HaplotypeScore=111.5855;InbreedingCoeff=0.3170;MQ=58.53;MQ0=10;MQRankSum=-6.075;QD=6.38;ReadPosRankSum=7.905;VQSLOD=2.6889;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:31:30.13:0,30,329	1/1:5,6:10:16.39:99,16,0	0/0:23,0:15:39.01:0,39,456	0/0:23,0:15:42.07:0,42,503	0/1:8,0:8:5.83:6,0,73	0/0:10,0:10:10.03:0,10,131	0/0:32,0:32:5.40:0,5,225	0/1:10,0:10:5.49:5,0,80	1/1:8,15:23:34.98:220,35,0	0/0:18,0:18:39:0,39,429	0/0:15,0:15:29.27:0,29,346	0/1:11,14:25:36.95:108,0,37	0/1:12,7:19:11.67:78,0,12	0/1:11,13:25:21.94:120,0,22	0/0:19,0:17:36.09:0,36,454	0/0:15,0:15:0.66:0,1,76	1/1:4,10:11:24.80:202,25,0	0/1:15,0:15:8.37:8,0,35	0/0:9,0:9:23.88:0,24,240	0/0:24,0:23:52.95:0,53,521	0/0:39,0:37:66.13:0,66,788	0/1:6,7:13:10.90:69,0,11	0/0:16,0:15:32.51:0,33,341	0/0:32,0:31:66.05:0,66,780	0/0:19,0:19:10.23:0,10,144	1/1:9,14:23:53.86:431,54,0	0/1:7,5:13:37.17:90,0,37	1/1:2,3:5:5.95:46,6,0
chr10	9355975	.	G	GGA	3723.06	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=11.115;DP=518;FS=0.899;HRun=0;HaplotypeScore=107.0087;InbreedingCoeff=0.9545;MQ=59.02;MQ0=9;MQRankSum=-8.301;QD=21.77;ReadPosRankSum=3.389;VQSLOD=4.3430;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:46.85:0,47,370	1/1:5,6:10:23.73:212,24,0	0/0:24,0:16:39.31:0,39,433	0/0:24,0:16:42.07:0,42,500	0/0:9,0:9:3.34:0,3,76	0/0:11,0:11:26:0,26,165	0/0:31,0:31:30.47:0,30,269	0/0:11,0:11:16.29:0,16,91	1/1:7,15:22:48.14:628,48,0	0/0:14,0:14:30.05:0,30,349	0/0:13,0:13:32.99:0,33,391	1/1:1,14:27:38.74:383,39,0	1/1:8,7:19:32.25:319,32,0	1/1:7,13:24:42.45:466,42,0	0/0:18,0:17:35.90:0,36,462	0/0:15,0:15:13.97:0,14,108	1/1:4,10:11:29.67:342,30,0	0/0:15,0:15:13.04:0,13,61	0/0:9,0:9:22.12:0,22,206	0/0:22,0:22:51.26:0,51,517	0/0:36,0:34:65.94:0,66,795	1/1:4,7:13:14.92:174,15,0	0/0:15,0:14:33:0,33,354	0/0:32,0:31:61.83:0,62,704	0/0:18,0:18:27.49:0,27,164	1/1:8,14:23:62.84:728,63,0	1/1:5,5:13:36.01:376,36,0	1/1:2,3:5:9.01:97,9,0
chr10	9357126	.	G	GTA	6182.82	PASS	AB=0.900;AC=22;AF=0.393;AN=56;BaseQRankSum=-12.226;DP=646;FS=0.830;HRun=0;HaplotypeScore=142.5087;InbreedingCoeff=0.6719;MQ=61.92;MQ0=5;MQRankSum=3.084;QD=21.47;ReadPosRankSum=5.388;VQSLOD=4.9537;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:34.72:0,35,376	1/1:0,13:13:30.10:502,30,0	0/0:12,0:10:4.98:0,5,62	0/0:13,0:12:10.06:0,10,73	0/0:35,0:35:57.03:0,57,693	0/0:23,0:23:42.11:0,42,507	0/0:19,0:19:17.43:0,17,208	0/0:58,0:58:99:0,135,1478	0/1:5,10:15:11.08:374,0,11	0/0:33,0:33:57.66:0,58,423	0/0:23,0:23:12.96:0,13,174	1/1:5,15:20:33.11:552,33,0	1/1:7,18:26:1.85:518,2,0	1/1:8,13:20:33.11:546,33,0	0/1:27,0:27:3.11:3,0,212	0/0:22,1:23:6.95:0,7,585	1/1:4,10:14:21.07:351,21,0	0/0:24,0:24:51.09:0,51,573	0/0:24,0:24:36.21:0,36,312	0/1:35,0:34:1.19:1,0,186	0/0:6,0:6:2.25:0,2,37	1/1:3,9:13:21.07:351,21,0	0/1:19,0:19:4.54:6,0,5	0/0:5,0:5:4.88:0,5,72	0/0:33,0:33:47.74:0,48,561	1/1:2,26:28:78.23:1222,78,0	1/1:7,30:36:66.23:1102,66,0	1/1:2,18:19:39.13:652,39,0
chr10	9357138	.	G	GTA	5610.04	PASS	AB=1.000;AC=40;AF=0.714;AN=56;BaseQRankSum=1.262;DP=616;FS=4.694;HRun=0;HaplotypeScore=153.4614;InbreedingCoeff=0.1266;MQ=61.63;MQ0=5;MQRankSum=1.319;QD=10.04;ReadPosRankSum=5.425;VQSLOD=4.4707;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:29:4.99:36,0,5	0/1:15,0:15:4.74:5,0,30	1/1:7,0:6:0.89:2,1,0	0/1:10,0:10:9.06:19,0,9	1/1:33,0:33:17.38:46,17,0	1/1:21,0:21:19.79:52,20,0	1/1:19,0:19:3.22:9,3,0	0/1:51,0:51:92.09:143,0,92	0/0:11,0:11:0.38:0,0,67	1/1:8,33:41:58.10:1415,58,0	1/1:5,21:26:30.10:498,30,0	0/1:16,0:16:1.06:1,0,33	0/1:23,0:23:8.46:8,0,118	0/1:16,0:15:22.41:22,0,98	1/1:6,19:25:36.12:602,36,0	0/1:22,0:22:0.47:27,0,0	0/1:12,0:12:25.72:42,0,26	1/1:25,0:25:4.92:67,5,0	1/1:6,14:20:42.14:671,42,0	1/1:5,29:33:60.21:1004,60,0	1/1:3,3:6:3.01:50,3,0	0/0:15,0:15:10.19:0,10,169	1/1:1,19:20:45.15:739,45,0	1/1:3,1:4:2.94:50,3,0	1/1:30,0:31:14.30:38,14,0	0/0:31,0:31:49.34:0,49,354	0/1:33,0:32:23.85:38,0,24	1/1:19,0:18:9.89:26,10,0
chr10	9357148	.	A	ATGTG	9789.79	PASS	AB=0.771;AC=16;AF=0.286;AN=56;BaseQRankSum=-14.175;DP=626;FS=13.730;HRun=0;HaplotypeScore=159.6635;InbreedingCoeff=0.8085;MQ=64.97;MQ0=5;MQRankSum=-3.452;QD=37.80;ReadPosRankSum=-1.436;VQSLOD=3.7970;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,19:31:41.65:934,42,0	0/0:16,0:16:39.12:0,39,690	0/0:12,0:13:12.82:0,13,359	0/0:15,0:13:10.11:0,10,269	1/1:1,30:33:39:1042,39,0	1/1:1,22:25:39.13:1052,39,0	1/1:2,14:16:11.55:290,12,0	1/1:9,40:52:99:3225,144,0	0/0:13,0:13:39.12:0,39,684	0/0:38,0:38:79.98:0,80,818	0/1:25,0:25:7.48:7,0,250	0/0:18,0:18:48.13:0,48,822	0/0:22,0:22:57.18:0,57,1002	0/0:17,0:16:45.15:0,45,806	0/0:23,0:23:46.87:0,47,387	0/1:4,20:26:10.74:1077,0,11	0/0:10,0:10:19.66:0,20,433	1/1:8,14:22:57.06:1273,57,0	0/0:18,0:18:49.51:0,50,444	0/0:31,0:30:60.89:0,61,338	0/0:7,0:7:17.94:0,18,236	0/0:17,0:17:39.09:0,39,709	0/0:22,0:22:51.30:0,51,339	0/0:4,0:4:5.89:0,6,64	1/1:3,26:29:32.40:889,32,0	0/0:34,0:34:93.28:0,93,1655	0/0:33,0:32:90.29:0,90,1562	0/0:15,0:14:42.14:0,42,772
chr10	9357877	.	A	AC	10588.81	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-13.426;DP=693;FS=18.250;HRun=1;HaplotypeScore=78.8399;InbreedingCoeff=0.9912;MQ=77.25;MQ0=0;MQRankSum=-3.071;QD=41.85;ReadPosRankSum=6.261;VQSLOD=2.7790;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:63,0:63:99:0,162,2201	1/1:0,14:14:39.13:621,39,0	0/0:30,0:30:84.20:0,84,1064	0/0:27,0:27:66.20:0,66,871	0/0:13,0:13:36.09:0,36,466	0/0:20,0:20:57.19:0,57,796	0/0:27,0:27:81.27:0,81,1133	0/0:18,0:18:45.14:0,45,600	1/1:0,26:26:75.26:1194,75,0	0/0:23,0:23:60.18:0,60,808	0/0:14,0:14:39.11:0,39,503	1/1:0,40:40:99:1819,114,0	1/1:0,30:30:81.20:1291,81,0	1/1:2,35:37:84.29:1340,84,0	0/0:31,0:31:93.31:0,93,1298	0/0:23,0:23:66.22:0,66,923	1/1:1,39:40:99:1676,105,0	0/0:16,0:16:48.16:0,48,671	0/0:17,0:17:42.13:0,42,567	0/0:19,0:19:51.15:0,51,694	0/0:30,0:30:78.24:0,78,1071	1/1:1,16:17:33.11:525,33,0	0/0:14,0:14:33.11:0,33,460	0/0:28,0:28:84.28:0,84,1174	0/0:27,0:27:63.21:0,63,880	1/1:2,18:19:54.16:832,54,0	1/1:0,26:26:72.25:1146,72,0	1/1:0,3:3:9.03:144,9,0
chr10	9359668	.	A	AAGAC	9985.69	PASS	AB=0.913;AC=40;AF=0.714;AN=56;BaseQRankSum=3.278;DP=722;FS=0.000;HRun=0;HaplotypeScore=155.2640;InbreedingCoeff=0.1083;MQ=76.18;MQ0=3;MQRankSum=-4.425;QD=16.00;ReadPosRankSum=-7.096;VQSLOD=2.4240;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:9,30:42:9.72:721,0,10	1/1:16,0:16:18.06:319,18,0	0/0:42,0:37:53.49:0,53,681	0/0:35,0:28:29.03:0,29,385	1/1:8,27:35:36.02:876,36,0	0/1:7,23:30:9.50:627,0,10	1/1:6,15:21:10.32:291,10,0	1/1:24,0:24:48.12:813,48,0	1/1:17,0:17:18.06:340,18,0	0/1:32,0:32:24.94:25,0,773	0/1:33,0:33:53.08:53,0,787	1/1:16,0:16:15.05:244,15,0	1/1:34,0:34:27.09:510,27,0	1/1:18,0:18:36.09:621,36,0	0/1:29,0:28:99:121,0,410	1/1:5,14:19:11.96:294,12,0	1/1:22,0:22:15.01:242,15,0	1/1:7,10:17:23.87:528,24,0	0/1:22,0:21:33.25:33,0,204	0/1:23,0:23:14.60:15,0,251	0/0:21,0:21:28.79:0,29,441	1/1:15,0:15:2.90:60,3,0	0/1:23,0:22:99:105,0,280	0/1:24,0:24:31.53:32,0,333	1/1:5,25:30:39.13:956,39,0	1/1:32,0:32:66.09:1058,66,0	1/1:36,0:36:33.56:606,34,0	0/1:14,0:14:27.29:494,0,27
chr10	9359671	.	A	ACAGG	9534.30	PASS	AB=1.000;AC=28;AF=0.500;AN=56;BaseQRankSum=6.577;DP=729;FS=14.141;HRun=0;HaplotypeScore=162.7339;InbreedingCoeff=0.3554;MQ=73.53;MQ0=3;MQRankSum=-5.359;QD=21.38;ReadPosRankSum=0.946;VQSLOD=4.0769;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:43,0:43:99:422,0,129	1/1:2,14:16:17.68:431,18,0	0/0:39,0:34:98.19:0,98,1362	0/0:34,0:27:50.98:0,51,730	0/1:35,0:35:42.72:538,0,43	0/1:29,0:29:89.04:394,0,89	0/1:21,0:21:57.64:183,0,58	0/1:26,0:26:76.75:317,0,77	1/1:5,13:18:21.03:475,21,0	0/0:34,0:34:97.21:0,97,1353	0/0:35,0:35:75.20:0,75,1154	1/1:4,12:18:0.62:348,1,0	1/1:2,31:35:10.02:655,10,0	1/1:9,8:17:44.24:886,44,0	0/0:28,0:27:56.12:0,56,717	0/1:19,0:19:32.02:172,0,32	1/1:6,15:21:12.03:295,12,0	0/1:19,0:19:78.17:312,0,78	0/0:22,0:21:39.89:0,40,638	0/0:24,0:24:23.84:0,24,422	0/0:20,0:20:36.07:0,36,621	1/1:1,14:17:2.45:78,2,0	0/0:25,0:24:42.67:0,43,533	0/0:22,0:22:39.65:0,40,550	0/1:29,0:29:49.81:574,0,50	1/1:4,28:34:98.63:1834,99,0	1/1:4,30:35:34.36:817,34,0	1/1:10,4:14:21.48:802,21,0
chr10	9359688	.	C	CACAG	8660.92	PASS	AB=0.984;AC=41;AF=0.759;AN=54;BaseQRankSum=4.500;DP=730;FS=0.000;HRun=0;HaplotypeScore=169.7423;InbreedingCoeff=0.0364;MQ=60.17;MQ0=8;MQRankSum=-0.177;QD=13.47;ReadPosRankSum=8.139;VQSLOD=3.8705;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:47,0:47:99:183,0,313	1/1:10,4:14:14.95:300,15,0	./.	0/0:24,0:16:2.60:0,3,38	0/1:33,0:33:42.98:256,0,43	0/1:32,0:32:99:166,0,203	0/1:20,0:20:64.56:65,0,160	0/0:40,0:39:39.09:0,39,501	1/1:16,2:18:27.08:470,27,0	1/1:16,18:35:9.99:928,10,0	1/1:21,18:42:18.06:427,18,0	1/1:14,1:15:21.02:290,21,0	1/1:20,8:28:30.10:638,30,0	1/1:14,5:19:27.09:556,27,0	1/1:10,14:24:24.08:569,24,0	0/1:18,0:18:70.35:70,0,158	0/1:20,1:21:11.36:275,0,11	0/1:20,0:20:99:114,0,286	1/1:16,0:17:14.93:139,15,0	1/1:8,0:37:8.06:110,8,0	1/1:22,0:22:12:130,12,0	1/1:18,1:19:14.94:250,15,0	1/1:12,11:22:21.07:498,21,0	1/1:11,15:27:9.03:213,9,0	0/1:28,0:28:3.76:263,0,4	0/1:25,3:28:5.27:546,0,5	1/1:27,6:34:45.13:842,45,0	1/1:11,4:15:18.06:362,18,0
chr10	9360708	.	ATCCT	A	18947.67	PASS	AB=1.000;AC=53;AF=0.946;AN=56;BaseQRankSum=1.221;DP=679;FS=23.234;HRun=0;HaplotypeScore=143.1287;InbreedingCoeff=0.6439;MQ=72.81;MQ0=1;MQRankSum=-4.615;QD=29.20;ReadPosRankSum=6.476;VQSLOD=3.1563;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:16,16:32:42.14:693,42,0	1/1:5,11:16:30.10:495,30,0	0/0:30,0:27:20.86:0,21,712	0/1:27,0:25:19.05:19,0,445	1/1:8,12:21:36.08:565,36,0	1/1:6,12:18:45.15:740,45,0	1/1:6,13:19:36.08:594,36,0	1/1:15,15:30:45.10:661,45,0	1/1:6,14:20:42.14:692,42,0	1/1:4,18:22:54.17:868,54,0	1/1:8,12:20:24.08:384,24,0	1/1:13,15:28:48.16:792,48,0	1/1:8,7:15:27.07:420,27,0	1/1:12,16:28:54.18:891,54,0	1/1:14,19:33:48.16:793,48,0	1/1:4,20:24:60.21:991,60,0	1/1:13,15:28:48.16:791,48,0	1/1:9,8:17:33.09:517,33,0	1/1:8,6:14:18.06:297,18,0	1/1:7,27:34:75.22:1209,75,0	1/1:13,13:26:36.12:594,36,0	1/1:7,18:25:54.18:892,54,0	1/1:6,14:20:39.13:644,39,0	1/1:12,22:33:57.19:941,57,0	1/1:10,20:31:57.19:918,57,0	1/1:7,17:24:54.18:892,54,0	1/1:9,20:28:69.24:1136,69,0	1/1:4,10:14:33.09:518,33,0
chr10	9360776	.	TG	T	4140.59	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-0.179;DP=577;FS=4.966;HRun=9;HaplotypeScore=105.4074;InbreedingCoeff=0.9769;MQ=83.47;MQ0=0;MQRankSum=-0.372;QD=22.02;ReadPosRankSum=4.098;VQSLOD=3.7112;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:18:39.37:0,39,232	1/1:6,6:12:26.98:235,27,0	0/0:31,0:30:48.33:0,48,513	0/0:23,0:20:4.14:0,4,257	0/0:4,0:20:39.92:0,40,208	0/0:6,0:18:28.71:0,29,171	0/0:8,0:19:37.09:0,37,198	0/0:4,0:21:48.66:0,49,273	1/1:1,18:19:48.01:434,48,0	0/0:23,0:24:50.97:0,51,555	0/0:16,0:16:45.12:0,45,510	1/1:0,17:17:51.03:466,51,0	1/1:1,18:19:54.03:494,54,0	1/1:3,20:23:51.02:466,51,0	0/0:27,0:27:63.16:0,63,700	0/0:3,0:25:62.69:0,63,328	1/1:3,16:19:36:329,36,0	0/0:3,0:16:40.11:0,40,242	0/0:16,0:16:36.06:0,36,395	0/0:29,0:29:63.15:0,63,696	0/0:19,0:19:51.13:0,51,568	1/1:2,13:15:36.02:329,36,0	0/0:20,0:20:54.13:0,54,602	0/0:21,0:21:54.15:0,54,614	0/0:11,0:24:46.20:0,46,272	1/1:5,21:26:31.40:536,31,0	1/1:6,25:31:75.03:686,75,0	1/1:1,6:7:18.01:165,18,0
chr10	9361956	.	C	CATA	18076.74	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-0.708;DP=738;FS=0.287;HRun=0;HaplotypeScore=124.6005;InbreedingCoeff=0.9991;MQ=76.37;MQ0=0;MQRankSum=-5.687;QD=58.31;ReadPosRankSum=4.785;VQSLOD=6.4044;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:96.33:0,96,1771	1/1:2,9:11:24.08:591,24,0	0/0:25,0:25:72.18:0,72,1248	0/0:16,0:16:39.13:0,39,709	0/0:38,0:38:99:0,111,1961	0/0:29,0:29:87.30:0,87,1621	0/0:26,0:26:75.26:0,75,1392	0/0:42,0:42:99:0,120,2079	1/1:1,21:22:63.22:1549,63,0	0/0:38,0:38:99:0,109,1957	0/0:21,0:21:63.22:0,63,1174	1/1:1,22:26:51.18:1231,51,0	1/1:1,33:34:90.31:2215,90,0	1/1:2,32:33:81.28:1973,81,0	0/0:33,0:33:93.28:0,93,1695	0/0:36,0:36:99:0,102,1873	1/1:1,19:20:42.14:1035,42,0	0/0:23,0:23:66.23:0,66,1198	1/1:0,11:15:45.11:959,45,0	1/1:0,38:38:93.32:2288,93,0	1/1:0,24:28:54.19:1331,54,0	1/1:0,20:21:39.13:957,39,0	0/0:23,0:23:63.22:0,63,1173	0/0:17,0:17:48.15:0,48,863	0/0:28,0:28:84.27:0,84,1533	1/1:4,27:32:40.41:2176,40,0	1/1:3,18:22:51.18:1255,51,0	1/1:0,7:7:21.07:518,21,0
chr10	9362132	.	C	CTGTGG	7310.24	PASS	AB=0.718;AC=31;AF=0.620;AN=50;BaseQRankSum=-10.219;DP=807;FS=21.053;HRun=0;HaplotypeScore=168.1220;InbreedingCoeff=0.8367;MQ=71.68;MQ0=11;MQRankSum=-0.787;QD=18.65;ReadPosRankSum=-4.018;VQSLOD=2.4632;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:41,10:52:21.96:529,22,0	1/1:7,4:11:9.03:247,9,0	./.	./.	1/1:11,4:15:12.04:327,12,0	0/1:17,9:27:28.08:551,0,28	1/1:33,0:33:14.95:195,15,0	./.	0/0:20,0:29:13.79:0,14,272	0/0:24,0:35:26.37:0,26,250	0/0:11,0:14:8.92:0,9,86	1/1:16,11:28:24.05:552,24,0	1/1:22,6:28:18.06:489,18,0	1/1:25,13:38:30.57:822,31,0	0/0:13,0:29:36:0,36,400	1/1:25,4:30:9.03:247,9,0	1/1:16,15:31:36.12:977,36,0	1/1:7,8:16:18.06:493,18,0	0/0:14,0:19:14.26:0,14,147	0/0:13,0:18:15.04:0,15,174	0/0:36,0:56:30.09:0,30,349	1/1:8,5:16:15.05:405,15,0	0/0:11,0:16:9.03:0,9,105	0/0:27,0:45:51.02:0,51,574	1/1:11,8:19:12.04:328,12,0	1/1:17,3:19:9.03:246,9,0	1/1:6,5:12:15.05:410,15,0	1/1:7,7:14:18.06:493,18,0
chr10	9364104	.	AT	A	10424.12	PASS	AB=1.000;AC=37;AF=0.661;AN=56;BaseQRankSum=14.308;DP=675;FS=1.406;HRun=8;HaplotypeScore=69.5075;InbreedingCoeff=0.9366;MQ=78.52;MQ0=0;MQRankSum=-1.929;QD=23.32;ReadPosRankSum=4.590;VQSLOD=5.3433;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:60.13:0,60,696	1/1:2,17:19:51.08:493,51,0	0/0:19,0:19:39.81:0,40,490	0/1:15,0:14:5.69:6,0,161	0/0:28,0:28:66.20:0,66,797	0/0:24,0:24:69.17:0,69,807	0/0:23,0:23:57.17:0,57,689	0/0:34,0:34:78.17:0,78,924	1/1:8,20:28:57.09:550,57,0	1/1:6,25:31:72.09:690,72,0	1/1:0,32:32:90.14:869,90,0	1/1:2,27:29:72.11:695,72,0	1/1:7,22:29:63.08:608,63,0	1/1:5,22:27:66.10:637,66,0	1/1:3,21:24:60.10:579,60,0	0/0:26,1:27:52.25:0,52,891	1/1:0,22:22:63.10:608,63,0	0/0:24,0:24:66.20:0,66,796	1/1:2,12:14:36.06:348,36,0	1/1:2,26:28:75.11:724,75,0	1/1:1,8:9:24.04:232,24,0	1/1:2,25:27:63.09:608,63,0	1/1:5,24:29:72.11:695,72,0	1/1:2,8:10:21.03:203,21,0	0/0:27,0:27:66.20:0,66,796	1/1:2,26:28:78.11:748,78,0	1/1:3,26:29:75.12:724,75,0	1/1:1,16:17:42.06:406,42,0
chr10	9366699	.	GC	G	2149.24	PASS	AB=0.885;AC=22;AF=0.393;AN=56;BaseQRankSum=4.369;DP=398;FS=0.465;HRun=10;HaplotypeScore=47.7348;InbreedingCoeff=0.5908;MQ=73.79;MQ0=1;MQRankSum=-1.247;QD=12.72;ReadPosRankSum=3.702;VQSLOD=2.9285;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,24:30:59.99:486,60,0	0/0:8,0:8:21.01:0,21,205	0/0:16,0:15:17.04:0,17,126	0/1:14,0:13:18.78:19,0,50	1/1:2,12:14:32.98:286,33,0	1/1:1,10:11:26.99:234,27,0	1/1:3,13:16:5.81:279,6,0	1/1:8,3:11:5.14:50,5,0	0/0:15,0:15:36.03:0,36,369	0/0:2,0:4:5.86:0,6,36	1/1:1,0:4:1.81:5,2,0	0/0:11,2:13:4.03:0,4,265	0/0:11,0:11:27.04:0,27,286	0/0:9,0:9:15.03:0,15,158	0/0:8,0:16:5.84:0,6,40	1/1:1,14:15:38.98:339,39,0	0/0:38,0:38:96.17:0,96,1015	1/1:1,15:16:38.99:339,39,0	0/1:6,1:7:8:8,0,146	0/1:11,0:11:4.81:5,0,160	0/0:25,0:27:53.95:0,54,561	0/0:16,0:16:33.08:0,33,360	0/0:5,0:8:0.14:0,0,1	0/0:7,0:21:11.69:0,12,82	1/1:4,13:18:18.57:270,19,0	0/0:7,0:7:12.03:0,12,133	0/0:19,1:19:16.07:0,16,404	0/1:0,1:2:8.27:20,0,8
chr10	9367565	.	GCT	G	7664.37	PASS	AB=1.000;AC=51;AF=0.911;AN=56;BaseQRankSum=-0.737;DP=536;FS=4.917;HRun=0;HaplotypeScore=93.0005;InbreedingCoeff=0.8836;MQ=67.05;MQ0=27;MQRankSum=-0.346;QD=16.52;ReadPosRankSum=4.636;VQSLOD=4.5053;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:31,0:31:0:0,0,0	1/1:14,0:14:17.77:142,18,0	0/0:40,0:18:33.68:0,34,340	0/0:32,0:17:30.48:0,30,283	1/1:12,3:15:26.84:211,27,0	1/1:20,0:19:53.50:451,54,0	1/1:16,0:14:32.63:270,33,0	1/1:22,0:20:53.95:468,54,0	1/1:20,0:20:46.46:348,46,0	1/1:16,0:16:40.83:389,41,0	1/1:6,0:5:11.66:85,12,0	1/1:13,0:13:32.96:274,33,0	1/1:17,0:17:44.92:370,45,0	1/1:14,0:14:32.90:260,33,0	1/1:29,0:27:59.72:464,60,0	1/1:15,0:14:34.29:304,34,0	1/1:24,0:24:62.70:507,63,0	1/1:17,0:15:38.93:368,39,0	1/1:18,0:18:45.41:399,45,0	1/1:13,0:12:26.95:218,27,0	1/1:52,0:38:63.57:486,64,0	1/1:11,0:11:29.95:249,30,0	1/1:7,0:7:8.80:72,9,0	1/1:28,1:25:42.29:327,42,0	1/1:9,0:9:20.90:166,21,0	1/1:12,0:12:32.97:283,33,0	1/1:10,0:10:29.68:221,30,0	1/1:14,0:14:41.86:333,42,0
chr10	9367566	.	CTCTGTG	C	7349.18	PASS	AB=0.969;AC=48;AF=0.857;AN=56;BaseQRankSum=-3.403;DP=537;FS=0.000;HRun=0;HaplotypeScore=124.3295;InbreedingCoeff=0.5810;MQ=65.99;MQ0=30;MQRankSum=-1.997;QD=16.93;ReadPosRankSum=2.702;VQSLOD=3.9494;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:4,28:31:0:0,0,0	1/1:1,0:14:17.90:237,18,0	0/0:39,0:17:33.68:0,34,341	0/0:32,0:17:30.48:0,30,283	1/1:15,0:15:26.85:251,27,0	1/1:19,0:19:25.63:384,26,0	1/1:16,0:14:31.21:248,31,0	1/1:22,0:20:54.42:468,54,0	1/1:20,0:20:17.02:314,17,0	1/1:16,0:16:40.81:384,41,0	1/1:6,0:5:11.83:87,12,0	1/1:13,0:12:32.92:266,33,0	1/1:16,1:17:42.41:406,42,0	1/1:12,2:14:32.93:304,33,0	1/1:29,0:27:46.84:431,47,0	0/1:14,0:14:55.39:231,0,55	1/1:24,0:24:61.89:461,62,0	0/1:17,0:15:13.30:202,0,13	1/1:18,0:18:20.42:356,20,0	1/1:13,0:12:26.95:218,27,0	1/1:53,0:39:56.75:474,57,0	1/1:11,0:11:29.77:225,30,0	1/1:7,0:7:8.94:71,9,0	1/1:29,0:25:34.97:316,35,0	1/1:8,0:8:7.55:153,8,0	1/1:12,0:12:32.97:283,33,0	1/1:8,1:10:29.75:245,30,0	1/1:14,0:14:41.86:333,42,0
chr10	9367622	.	GGT	G	1695.67	PASS	AB=0.814;AC=14;AF=0.269;AN=52;BaseQRankSum=0.701;DP=601;FS=32.959;HRun=0;HaplotypeScore=90.7957;InbreedingCoeff=0.6422;MQ=45.11;MQ0=107;MQRankSum=0.699;QD=6.89;ReadPosRankSum=1.355;VQSLOD=1.5689;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:25:36.12:0,36,541	0/0:13,0:12:20.57:0,21,263	0/0:12,0:2:5.98:0,6,49	0/0:14,0:4:6.48:0,6,75	0/0:13,0:12:18.06:0,18,277	0/0:16,0:15:29:0,29,350	0/1:35,0:24:7.01:7,0,524	0/0:31,0:17:38.07:0,38,645	0/0:18,0:16:27.09:0,27,378	0/1:9,14:17:8.13:363,0,8	./.	0/0:26,0:19:30.08:0,30,425	0/0:19,0:16:25.47:0,25,350	0/0:16,0:13:23.89:0,24,335	0/1:12,16:26:0:0,0,0	0/1:19,0:13:7.68:8,0,326	0/0:27,1:29:24.29:0,24,455	0/0:19,0:15:28.64:0,29,375	1/1:15,4:14:30.06:352,30,0	1/1:19,3:19:28.01:319,28,0	1/1:52,6:40:48.15:599,48,0	0/0:24,0:19:35.67:0,36,467	1/1:12,2:10:11.83:146,12,0	1/1:15,13:23:5.71:70,6,0	0/0:19,0:10:12.04:0,12,173	0/0:23,1:19:20.24:0,20,645	0/0:16,0:15:32.63:0,33,449	./.
chr10	9367775	.	C	CGT	5490.89	PASS	AB=0.745;AC=14;AF=0.250;AN=56;BaseQRankSum=-7.834;DP=728;FS=17.749;HRun=0;HaplotypeScore=108.0746;InbreedingCoeff=0.4603;MQ=64.22;MQ0=8;MQRankSum=0.786;QD=19.13;ReadPosRankSum=1.673;VQSLOD=3.6607;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:39:96.04:0,96,1077	0/0:10,0:10:21.06:0,21,251	0/1:48,0:28:17.58:18,0,246	0/0:36,0:21:26.39:0,26,295	0/0:21,0:21:30.09:0,30,356	0/0:19,0:19:36.11:0,36,431	0/0:20,0:23:48:0,48,582	0/0:28,0:27:51.16:0,51,611	0/0:21,0:21:42.13:0,42,503	1/1:7,14:21:48.15:738,48,0	1/1:4,12:16:30.10:478,30,0	0/0:23,0:23:60.17:0,60,708	0/0:26,0:26:45.05:0,45,527	0/0:28,0:28:60.18:0,60,719	1/1:6,21:28:37.52:664,38,0	0/0:16,0:16:36.11:0,36,431	0/0:40,0:40:78.24:0,78,933	0/0:32,0:32:69.21:0,69,825	0/1:9,9:18:77.89:228,0,78	0/1:6,15:21:21.78:439,0,22	0/1:27,41:69:60.39:1610,0,60	0/0:33,0:33:78.19:0,78,916	1/1:2,6:8:18.06:288,18,0	0/1:13,27:39:6.42:1022,0,6	0/1:17,0:17:5.92:6,0,392	0/0:24,0:24:45.14:0,45,538	0/0:17,0:16:33.10:0,33,396	0/0:5,0:5:12.04:0,12,144
chr10	9377257	.	CT	C	1943.17	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=0.665;DP=494;FS=1.621;HRun=7;HaplotypeScore=147.1709;InbreedingCoeff=0.9733;MQ=47.93;MQ0=18;MQRankSum=-7.659;QD=17.35;ReadPosRankSum=-0.048;VQSLOD=2.0070;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:55.24:0,55,615	1/1:3,7:10:15.03:152,15,0	0/0:41,0:9:21.07:0,21,260	0/0:38,1:17:24.61:0,25,356	0/0:18,0:18:45.13:0,45,536	0/0:26,0:26:69.17:0,69,810	0/0:22,0:20:45.10:0,45,511	0/0:28,0:28:66.21:0,66,816	0/0:13,0:13:39.07:0,39,457	0/0:18,0:16:42.96:0,43,497	0/0:10,0:9:21.06:0,21,250	1/1:1,12:12:26.97:261,27,0	1/1:1,14:14:27.05:274,27,0	1/1:1,11:12:24.04:243,24,0	0/0:17,0:18:42.08:0,42,452	0/0:12,0:12:36.01:0,36,398	1/1:5,5:10:6.27:113,6,0	0/0:12,0:12:33.10:0,33,406	0/0:12,0:12:24.08:0,24,302	0/0:15,0:15:37.36:0,37,448	0/0:21,0:22:42:0,42,492	1/1:2,7:9:12.01:122,12,0	0/0:18,0:17:34.92:0,35,412	0/0:16,0:15:24.02:0,24,284	0/0:19,0:19:51.15:0,51,607	1/1:3,15:17:48.10:484,48,0	1/1:7,10:16:25.76:265,26,0	1/1:1,7:8:24.04:239,24,0
chr10	9377430	.	A	AC	3851.12	PASS	AB=0.869;AC=29;AF=0.518;AN=56;BaseQRankSum=13.454;DP=470;FS=3.843;HRun=3;HaplotypeScore=90.5081;InbreedingCoeff=0.7216;MQ=58.45;MQ0=4;MQRankSum=-2.263;QD=17.67;ReadPosRankSum=-0.557;VQSLOD=3.1361;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:9,21:30:63.19:790,63,0	0/0:15,0:15:39.12:0,39,466	0/0:20,0:16:39.10:0,39,451	0/0:25,0:17:38.18:0,38,458	1/1:6,19:25:51.07:758,51,0	1/1:3,18:20:51.16:651,51,0	0/1:12,12:20:11.18:413,0,11	1/1:6,5:10:14.97:157,15,0	1/1:9,0:9:1.41:3,1,0	0/1:15,0:16:2.30:8,0,2	1/1:6,0:12:8.09:40,8,0	0/0:23,0:23:66.20:0,66,788	0/0:23,0:22:63.15:0,63,721	0/0:26,0:26:75.23:0,75,899	0/0:8,0:8:0.89:0,1,2	1/1:5,7:12:13.27:317,13,0	0/0:28,0:28:81.11:0,81,909	1/1:1,9:10:27.09:348,27,0	1/1:6,0:5:0.47:1,0,0	1/1:7,0:8:5.34:28,5,0	1/1:8,0:8:2.80:14,3,0	0/0:30,0:30:81.25:0,81,970	0/1:5,0:5:0.01:0,0,0	1/1:5,0:5:3.91:22,4,0	1/1:7,9:16:24.08:301,24,0	0/0:21,0:21:63.19:0,63,746	0/0:11,0:11:30.05:0,30,336	0/0:21,0:21:57.17:0,57,684
chr10	9379341	.	TC	T	15413.27	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-6.196;DP=620;FS=6.955;HRun=7;HaplotypeScore=64.7681;InbreedingCoeff=0.9972;MQ=82.40;MQ0=0;MQRankSum=-9.095;QD=26.39;ReadPosRankSum=5.191;VQSLOD=5.3116;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,39:39:99:1101,108,0	1/1:1,12:13:30.07:306,30,0	0/0:17,0:17:40.65:0,41,508	0/0:19,0:19:51.09:0,51,612	1/1:1,19:20:48.10:489,48,0	1/1:1,30:31:78.17:796,78,0	1/1:2,19:21:51.11:520,51,0	1/1:3,24:27:72.16:734,72,0	1/1:1,24:25:57.13:581,57,0	1/1:0,30:30:90.19:911,90,0	1/1:1,16:17:45.10:459,45,0	1/1:3,15:18:39.09:398,39,0	1/1:1,17:18:48.11:489,48,0	1/1:2,23:25:60.13:611,60,0	1/1:3,35:38:99:1040,102,0	1/1:1,19:20:54.12:551,54,0	1/1:1,19:20:54.12:551,54,0	1/1:0,9:9:21.05:214,21,0	1/1:5,15:20:42.09:429,42,0	1/1:1,12:13:36.08:367,36,0	1/1:4,28:32:78.18:795,78,0	1/1:1,17:18:45.02:436,45,0	1/1:1,20:21:50.98:509,51,0	1/1:1,25:26:75.17:765,75,0	1/1:0,15:15:42.06:417,42,0	1/1:0,37:37:99:1119,111,0	1/1:0,18:18:51.12:520,51,0	1/1:1,12:13:30.07:306,30,0
chr10	9379690	.	TC	T	1572.47	PASS	AB=0.625;AC=49;AF=0.875;AN=56;BaseQRankSum=-1.917;DP=190;FS=40.302;HRun=2;HaplotypeScore=43.3940;InbreedingCoeff=0.3045;MQ=88.22;MQ0=3;MQRankSum=-3.421;QD=10.21;ReadPosRankSum=0.102;VQSLOD=-0.7269;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:3:1.34:25,1,0	1/1:3,5:8:6.10:25,6,0	0/0:12,0:8:18.31:0,18,200	0/0:14,0:13:21.06:0,21,280	1/1:6,5:11:8.79:96,9,0	0/1:4,6:9:4.47:104,0,4	1/1:0,3:3:3.88:27,4,0	1/1:1,5:6:10.09:85,10,0	1/1:0,3:3:3.01:38,3,0	1/1:9,5:12:14.27:106,14,0	1/1:4,5:8:5.89:77,6,0	1/1:3,0:3:6.02:76,6,0	1/1:0,5:5:3.01:38,3,0	1/1:0,3:3:3.01:38,3,0	1/1:0,3:3:6.02:76,6,0	1/1:0,6:6:5.38:47,5,0	1/1:1,3:4:9.02:99,9,0	1/1:0,4:4:3.01:38,3,0	1/1:8,0:7:16.63:151,17,0	1/1:4,6:10:5.04:29,5,0	1/1:1,4:5:6.91:79,7,0	1/1:6,0:6:5.91:76,6,0	0/0:10,0:10:1.46:0,1,5	1/1:2,0:2:2.70:38,3,0	1/1:4,0:4:0.89:2,1,0	1/1:5,5:10:23.43:195,23,0	1/1:8,0:9:0.95:73,1,0	1/1:4,0:4:4.12:63,4,0
chr10	9379691	.	C	CT	2343.71	PASS	AB=0.900;AC=49;AF=0.875;AN=56;BaseQRankSum=-1.840;DP=183;FS=39.448;HRun=1;HaplotypeScore=38.7710;InbreedingCoeff=0.3711;MQ=83.33;MQ0=3;MQRankSum=-4.608;QD=15.62;ReadPosRankSum=0.437;VQSLOD=1.2269;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,3:3:1.35:45,1,0	1/1:8,0:8:9.24:66,9,0	0/0:10,0:7:17.79:0,18,197	0/0:12,0:11:24.72:0,25,259	1/1:9,2:11:8.80:96,9,0	0/1:8,1:8:1.22:107,0,1	1/1:3,0:3:6.02:93,6,0	1/1:5,1:6:18.06:268,18,0	1/1:3,0:3:3.01:38,3,0	1/1:14,0:12:21.89:182,22,0	1/1:9,0:8:6.41:78,6,0	1/1:0,3:3:6.02:76,6,0	1/1:5,0:5:3.01:38,3,0	1/1:3,0:3:3.01:38,3,0	1/1:3,0:3:6.02:76,6,0	1/1:6,0:6:6.02:84,6,0	1/1:3,0:4:9.03:122,9,0	1/1:4,0:4:3.01:38,3,0	1/1:0,8:7:21.03:260,21,0	1/1:10,0:10:5.07:54,5,0	1/1:4,1:5:9.03:124,9,0	1/1:2,4:6:6.42:77,6,0	0/0:5,5:10:1.45:0,1,5	1/1:0,2:2:3.01:38,3,0	1/1:1,2:3:2.04:6,2,0	1/1:7,1:8:23.61:227,24,0	1/1:1,8:9:11.42:133,11,0	1/1:0,4:4:9:106,9,0
chr10	9379692	.	C	CT	363.75	PASS	AB=0.920;AC=25;AF=0.446;AN=56;BaseQRankSum=-2.268;DP=175;FS=6.060;HRun=1;HaplotypeScore=43.9360;InbreedingCoeff=0.2315;MQ=77.79;MQ0=3;MQRankSum=-6.632;QD=3.53;ReadPosRankSum=3.956;VQSLOD=0.2832;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,1:2:2.60:10,3,0	1/1:5,3:8:10.58:116,11,0	0/0:10,0:6:7.79:0,8,114	0/0:10,0:9:22.14:0,22,217	0/0:8,3:11:4.60:0,5,16	0/1:8,1:8:10.56:44,0,11	0/0:3,0:3:2.92:0,3,9	0/1:6,0:6:4.26:4,0,14	0/0:3,0:3:2.37:0,2,8	0/1:8,5:12:14.73:154,0,15	0/0:5,3:8:4.51:0,5,15	1/1:3,0:3:2.13:6,2,0	0/0:5,0:5:2.37:0,2,8	0/0:3,0:3:2.04:0,2,6	0/0:3,0:3:4.74:0,5,16	0/0:6,0:6:3.93:0,4,12	0/1:4,0:4:3.93:12,0,4	0/0:4,0:4:2.22:0,2,7	0/1:7,0:6:0.87:1,0,23	1/1:8,2:10:5.37:26,5,0	0/0:5,0:5:5.14:0,5,15	1/1:4,2:6:1.83:4,2,0	1/1:4,4:8:2.60:10,3,0	1/1:2,0:2:2.60:10,3,0	1/1:2,1:3:3.01:41,3,0	0/1:6,2:8:4.04:51,0,4	1/1:8,0:8:1.83:15,2,0	0/1:4,0:4:1.33:2,0,1
chr10	9381294	.	AT	A	9395.58	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-0.743;DP=465;FS=14.569;HRun=9;HaplotypeScore=56.3296;InbreedingCoeff=0.8802;MQ=73.46;MQ0=0;MQRankSum=-5.577;QD=21.80;ReadPosRankSum=2.567;VQSLOD=4.4151;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,27:34:72.03:659,72,0	1/1:3,7:10:21.01:192,21,0	0/0:16,0:15:5.64:0,6,208	0/0:10,0:10:5.76:0,6,130	1/1:3,32:35:81.02:741,81,0	1/1:5,20:25:57.02:522,57,0	1/1:5,13:18:36.01:329,36,0	1/1:7,26:33:77.98:706,78,0	0/0:8,0:8:21.06:0,21,242	1/1:3,16:19:45.01:406,45,0	1/1:1,24:25:66.03:604,66,0	1/1:2,9:11:21.01:192,21,0	1/1:0,7:7:21.01:192,21,0	1/1:0,17:17:48.03:439,48,0	1/1:1,12:13:27.01:247,27,0	1/1:0,10:10:30.02:275,30,0	1/1:4,16:20:48.02:439,48,0	1/1:2,12:14:36.01:329,36,0	1/1:1,19:20:25.41:487,25,0	1/1:2,19:21:38.99:357,39,0	1/1:2,7:9:21.01:192,21,0	1/1:1,10:11:24:220,24,0	1/1:0,13:13:27.01:247,27,0	1/1:2,3:5:9:82,9,0	1/1:3,19:22:54.02:494,54,0	1/1:1,13:14:39.02:357,39,0	1/1:0,20:20:60.03:549,60,0	1/1:0,5:5:15.01:137,15,0
chr10	9381622	.	TTTTTTTTTC	T	3705.32	PASS	AB=0.990;AC=35;AF=0.625;AN=56;BaseQRankSum=2.732;DP=469;FS=15.300;HRun=0;HaplotypeScore=137.8474;InbreedingCoeff=-0.0670;MQ=57.57;MQ0=3;MQRankSum=-3.219;QD=8.72;ReadPosRankSum=2.969;VQSLOD=1.8988;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:20,3:23:17.70:377,18,0	1/1:7,0:7:6.01:73,6,0	0/0:11,0:6:9.15:0,9,128	0/0:10,0:9:13.71:0,14,317	1/1:31,2:33:3.60:138,4,0	1/1:10,1:11:4.88:253,5,0	1/1:18,1:19:41.63:546,42,0	1/1:25,0:25:8.63:218,9,0	0/0:19,0:18:39.11:0,39,1218	1/1:19,0:19:9.29:145,9,0	0/1:21,0:21:12.60:143,0,13	0/1:16,1:17:69.57:114,0,70	0/1:13,0:13:56.62:60,0,57	0/1:12,1:12:18.50:160,0,19	0/1:18,0:18:73.09:91,0,73	1/1:22,1:23:11.66:161,12,0	0/1:27,0:26:68.42:68,0,74	1/1:16,1:16:15.01:196,15,0	1/1:18,0:18:18.27:121,18,0	0/1:19,0:18:54.90:106,0,55	0/1:16,0:15:25.87:26,0,74	0/1:15,0:15:34.02:135,0,34	0/1:18,0:18:11.21:21,0,11	0/1:5,0:4:1.24:40,0,1	1/1:18,2:19:19.25:287,19,0	0/1:12,0:11:23.98:145,0,24	0/1:16,0:15:38.44:79,0,38	0/0:4,0:4:2.92:0,3,17
chr10	9381623	.	TTTTTTTTC	T	6586.94	PASS	AB=0.985;AC=46;AF=0.821;AN=56;BaseQRankSum=-1.828;DP=470;FS=3.433;HRun=0;HaplotypeScore=121.0006;InbreedingCoeff=0.3607;MQ=55.84;MQ0=5;MQRankSum=-1.228;QD=15.21;ReadPosRankSum=1.068;VQSLOD=3.7575;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:17,8:25:45.36:651,45,0	1/1:5,1:6:6.02:115,6,0	0/0:11,0:6:9.36:0,9,112	0/0:9,0:8:14.46:0,14,304	1/1:11,21:32:21.23:233,21,0	1/1:6,5:11:19.61:386,20,0	1/1:12,9:20:51:852,51,0	1/1:22,4:26:34.14:398,34,0	0/0:17,0:16:38.90:0,39,1034	1/1:20,0:20:28.57:274,29,0	1/1:21,1:22:50.91:511,51,0	0/1:17,0:17:9.98:184,0,10	1/1:12,1:13:2.74:175,3,0	1/1:13,0:12:24.67:245,25,0	0/1:17,0:17:21.23:216,0,21	1/1:7,16:23:13.12:211,13,0	0/1:26,0:26:60.26:112,0,60	1/1:3,14:16:14.90:259,15,0	1/1:17,0:17:21.86:216,22,0	1/1:18,1:18:5.25:246,5,0	1/1:16,1:15:1.57:105,2,0	0/1:15,1:16:19.63:221,0,20	1/1:18,0:18:5.70:61,6,0	1/1:6,0:5:8.28:98,8,0	1/1:3,16:18:19.56:379,20,0	1/1:11,1:11:7.20:223,7,0	1/1:15,1:15:15.30:214,15,0	1/1:4,0:4:0.47:1,0,0
chr10	9381624	.	TTTTTTTC	T	7781.39	PASS	AB=0.635;AC=47;AF=0.839;AN=56;BaseQRankSum=-3.115;DP=482;FS=2.801;HRun=0;HaplotypeScore=113.1413;InbreedingCoeff=0.5471;MQ=55.22;MQ0=6;MQRankSum=-0.834;QD=17.53;ReadPosRankSum=-1.070;VQSLOD=4.0848;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:25:48.32:550,48,0	1/1:2,3:5:6.02:122,6,0	0/0:11,0:6:9.39:0,9,92	0/0:9,0:8:14.57:0,15,271	1/1:31,1:32:26.90:235,27,0	1/1:12,0:12:23.73:337,24,0	1/1:21,0:20:50.95:674,51,0	1/1:26,1:27:32.75:298,33,0	0/0:18,0:17:36.87:0,37,862	1/1:4,15:19:35.91:480,36,0	1/1:22,2:24:63.52:684,64,0	1/1:16,1:17:22.51:299,23,0	1/1:13,1:14:31.57:311,32,0	1/1:13,2:14:35.92:401,36,0	0/1:13,5:18:3.65:400,0,4	1/1:23,1:24:16.38:216,16,0	0/1:3,23:26:46.12:191,0,46	1/1:17,0:16:14.97:205,15,0	1/1:6,11:17:24.01:355,24,0	1/1:16,4:19:40.26:421,40,0	1/1:15,3:16:25.25:213,25,0	0/1:5,11:16:5.40:307,0,5	1/1:3,15:18:8.30:107,8,0	1/1:6,0:5:8.59:82,9,0	1/1:19,0:18:20.04:298,20,0	1/1:10,3:12:20.26:287,20,0	1/1:15,1:15:27.45:290,27,0	1/1:1,4:4:2.97:20,3,0
chr10	9381625	.	TTTTTTC	T	7406.30	PASS	AB=1.000;AC=49;AF=0.875;AN=56;BaseQRankSum=-2.840;DP=497;FS=6.928;HRun=0;HaplotypeScore=111.7444;InbreedingCoeff=0.6535;MQ=54.50;MQ0=6;MQRankSum=0.907;QD=16.14;ReadPosRankSum=-1.158;VQSLOD=3.4769;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:26:51.24:534,51,0	1/1:5,0:5:6.02:99,6,0	0/0:11,0:6:9.18:0,9,72	0/0:9,0:8:8.13:0,8,218	1/1:32,0:32:27.42:225,27,0	1/1:12,0:12:23.80:309,24,0	1/1:20,0:19:50.79:616,51,0	1/1:28,0:28:28.29:272,28,0	0/0:18,0:17:14.67:0,15,664	1/1:18,1:19:35.89:415,36,0	1/1:24,2:26:69.07:695,69,0	1/1:16,1:17:31.38:318,31,0	1/1:16,0:16:40.53:351,41,0	1/1:15,1:15:38.89:380,39,0	1/1:16,1:17:8.47:345,8,0	1/1:24,0:24:16.03:182,16,0	0/1:26,0:26:32.05:137,0,32	1/1:17,0:16:14.96:187,15,0	1/1:16,1:17:24:310,24,0	1/1:23,1:23:51.88:460,52,0	1/1:19,0:17:31.45:233,31,0	1/1:14,2:16:8.49:238,8,0	1/1:18,0:18:8.46:89,8,0	1/1:7,0:6:11.68:98,12,0	1/1:19,0:18:20.23:270,20,0	1/1:15,0:14:29.82:319,30,0	1/1:18,0:17:37.06:304,37,0	1/1:5,0:4:2.98:21,3,0
chr10	9382068	.	TTCTCGTG	T	34565.58	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=7.649;DP=656;FS=6.430;HRun=0;HaplotypeScore=179.4469;InbreedingCoeff=0.9618;MQ=84.07;MQ0=3;MQRankSum=-13.907;QD=60.64;ReadPosRankSum=5.260;VQSLOD=4.4762;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,21:21:57.20:1476,57,0	1/1:0,10:10:27.09:685,27,0	0/0:28,0:28:72.25:0,72,2533	0/0:34,0:34:96.33:0,96,3585	1/1:0,20:20:54.19:1371,54,0	1/1:2,21:23:54.19:1423,54,0	1/1:4,22:26:60.21:1581,60,0	1/1:4,26:30:78.22:1892,78,0	0/0:24,0:24:72.25:0,72,2889	1/1:3,26:29:78.27:2014,78,0	1/1:2,10:12:27.09:687,27,0	1/1:1,27:28:66.23:1721,66,0	1/1:2,27:29:81.28:2135,81,0	1/1:1,21:21:51.18:1344,51,0	1/1:1,28:29:69.24:1800,69,0	1/1:1,32:33:93.32:2451,93,0	1/1:5,22:27:51.17:1302,51,0	1/1:3,9:12:27.09:686,27,0	1/1:7,18:25:51.17:1269,51,0	1/1:3,21:24:60.16:1422,60,0	1/1:4,15:19:24.08:521,24,0	1/1:2,20:22:57.15:1353,57,0	1/1:2,18:19:44.89:1185,45,0	1/1:2,15:17:30.10:746,30,0	1/1:2,19:21:48.16:1264,48,0	1/1:1,33:34:96.32:2399,96,0	1/1:6,24:30:66.23:1682,66,0	1/1:4,2:6:6.02:158,6,0
chr10	9382572	.	C	CTTTTT	9680.32	PASS	AB=1.000;AC=53;AF=0.946;AN=56;BaseQRankSum=-0.996;DP=376;FS=1.288;HRun=15;HaplotypeScore=146.2211;InbreedingCoeff=0.4424;MQ=69.87;MQ0=3;MQRankSum=-3.032;QD=27.82;ReadPosRankSum=0.413;VQSLOD=2.8506;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:15:24.40:402,24,0	1/1:7,0:7:9.03:188,9,0	0/1:31,0:14:13.24:13,0,151	0/0:27,0:17:10.41:0,10,90	1/1:14,0:16:36.02:605,36,0	1/1:12,1:13:26.58:523,27,0	1/1:10,0:10:18.06:391,18,0	1/1:24,0:24:28.80:501,29,0	1/1:6,2:8:19.29:285,19,0	1/1:18,0:18:39.09:808,39,0	1/1:13,0:13:26.52:462,27,0	1/1:8,0:9:13.22:173,13,0	1/1:11,0:11:19.61:307,20,0	1/1:8,0:8:18.06:381,18,0	1/1:6,0:9:20.89:337,21,0	1/1:7,0:7:13.84:207,14,0	1/1:10,1:11:12.19:90,12,0	1/1:11,1:13:18.06:369,18,0	1/1:28,0:27:48.07:935,48,0	1/1:10,0:11:15.05:330,15,0	1/1:11,0:11:7.57:92,8,0	1/1:5,0:5:4.83:77,5,0	1/1:5,0:5:8.39:150,8,0	1/1:5,0:5:9.50:211,10,0	1/1:6,0:7:15.05:226,15,0	1/1:13,0:12:25.48:423,25,0	1/1:17,0:18:38.48:660,38,0	1/1:12,1:13:30.05:537,30,0
chr10	9382594	.	TCG	T	237.49	PASS	AB=0.919;AC=17;AF=0.304;AN=56;BaseQRankSum=6.122;DP=309;FS=1.350;HRun=0;HaplotypeScore=100.8063;InbreedingCoeff=-0.4295;MQ=68.34;MQ0=8;MQRankSum=-2.025;QD=1.55;ReadPosRankSum=3.149;VQSLOD=1.8716;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:12,0:9:1.33:1,0,74	0/1:2,0:2:8.29:8,0,28	0/0:44,1:16:30.32:0,30,279	0/0:46,0:21:28.58:0,29,309	0/0:12,0:12:23.94:0,24,269	0/1:2,2:4:12.44:12,0,29	0/1:5,0:5:11.79:12,0,90	0/0:17,0:16:26.78:0,27,562	0/0:8,0:8:10.26:0,10,128	0/1:16,0:16:6.15:6,0,365	0/0:10,0:10:20.51:0,21,256	0/0:3,1:4:2.20:0,2,61	0/1:9,0:9:72.30:72,0,111	0/1:6,0:6:10.06:10,0,79	0/1:8,0:9:20.48:20,0,76	0/0:4,0:4:5.79:0,6,107	0/1:5,1:6:10.58:11,0,115	0/1:10,1:12:13.77:14,0,211	0/1:11,3:15:72.11:72,0,382	0/1:8,0:8:21.06:21,0,106	0/1:3,0:3:16.10:16,0,41	0/0:1,0:1:3.01:0,3,47	0/0:3,0:3:9.02:0,9,95	0/0:4,0:4:9.02:0,9,91	0/1:7,1:8:11.30:11,0,59	0/1:11,0:8:5.61:6,0,134	0/1:8,3:12:71.19:71,0,82	0/1:14,0:14:19.69:20,0,214
chr10	9382598	.	CTTTT	C	3541.54	PASS	AB=0.738;AC=30;AF=0.536;AN=56;BaseQRankSum=-6.144;DP=321;FS=20.748;HRun=14;HaplotypeScore=99.8546;InbreedingCoeff=0.4173;MQ=69.81;MQ0=10;MQRankSum=-1.756;QD=18.54;ReadPosRankSum=2.631;VQSLOD=0.6830;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:11:0.38:0,0,107	0/1:1,1:2:4.23:37,0,4	0/1:46,1:16:9.62:10,0,135	0/0:52,0:23:39.07:0,39,292	0/0:4,0:12:2.17:0,2,102	0/0:3,0:4:1.39:0,1,73	0/1:3,0:5:1.90:2,0,56	0/0:9,0:14:3.46:0,3,138	0/0:6,0:8:23.82:0,24,360	1/1:3,12:15:24.82:545,25,0	1/1:2,8:10:24.06:331,24,0	1/1:2,2:4:1.69:82,2,0	1/1:5,3:8:21.05:267,21,0	1/1:3,3:6:17.02:192,17,0	1/1:5,3:9:9.42:142,9,0	0/0:3,0:3:5.85:0,6,43	0/1:4,4:8:6.12:177,0,6	0/0:6,0:12:9.74:0,10,107	1/1:5,8:14:21.28:394,21,0	1/1:2,6:8:12.58:222,13,0	0/0:2,1:3:2.37:0,2,8	0/0:1,0:1:0:0,0,0	1/1:0,3:3:9.03:127,9,0	1/1:0,3:4:9.01:109,9,0	0/1:5,0:10:4.16:4,0,11	1/1:9,2:8:15.02:182,15,0	0/1:7,3:10:6.06:211,0,6	1/1:7,7:14:21.31:509,21,0
chr10	9382612	.	TCTTC	T	1327.96	PASS	AB=0.927;AC=23;AF=0.411;AN=56;BaseQRankSum=1.986;DP=366;FS=1.125;HRun=0;HaplotypeScore=110.2672;InbreedingCoeff=-0.0513;MQ=62.11;MQ0=14;MQRankSum=-1.533;QD=5.77;ReadPosRankSum=5.788;VQSLOD=1.6506;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:15.79:0,16,91	0/1:3,0:3:16.85:17,0,30	0/0:57,0:11:3.48:0,3,143	0/1:86,0:30:3.23:3,0,282	0/0:13,0:13:10.24:0,10,184	0/0:5,0:5:0.01:0,0,72	0/1:5,0:5:3.91:4,0,137	0/0:9,0:9:21.60:0,22,157	0/0:8,0:8:23.93:0,24,257	0/1:16,1:17:18.93:127,0,19	0/1:11,0:11:60.40:65,0,60	0/1:5,0:5:22.15:22,0,38	1/1:5,2:7:17.18:184,17,0	1/1:6,0:7:0.25:90,0,0	0/1:9,1:10:24.99:126,0,25	0/0:3,0:3:8.96:0,9,82	0/1:8,0:8:19.50:63,0,19	0/0:14,0:14:3.54:0,4,150	0/1:11,0:12:16.55:122,0,17	1/1:6,0:7:12.79:45,13,0	0/1:3,0:3:0:0,0,0	0/0:1,0:1:3.01:0,3,49	1/1:3,0:3:7.79:30,8,0	1/1:4,0:4:3.80:15,4,0	0/0:12,0:12:26.94:0,27,198	0/1:6,1:8:42.85:110,0,43	0/1:11,1:14:99:179,0,163	0/1:11,4:15:12.56:284,0,13
chr10	9382618	.	TCG	T	57.01	PASS	AB=0.903;AC=12;AF=0.222;AN=54;BaseQRankSum=5.236;DP=376;FS=5.506;HRun=0;HaplotypeScore=102.4893;InbreedingCoeff=-0.2994;MQ=58.68;MQ0=16;MQRankSum=-1.359;QD=0.22;ReadPosRankSum=3.934;VQSLOD=1.3577;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:7:5.40:0,5,32	0/0:4,0:4:1.71:0,2,72	0/1:61,0:9:6.08:6,0,128	0/1:92,0:29:12.15:12,0,181	0/1:12,2:14:12.45:12,0,244	0/0:4,0:4:1.41:0,1,78	0/1:5,0:5:6.71:7,0,168	0/0:9,1:10:4.69:0,5,179	0/0:10,0:10:22.74:0,23,264	0/1:18,0:19:1.27:1,0,609	0/0:11,0:11:27.02:0,27,385	0/0:5,0:5:14.80:0,15,188	0/1:7,0:7:10.73:11,0,93	0/0:8,0:8:4.39:0,4,224	0/1:7,0:8:24.25:24,0,146	0/1:1,1:2:11.88:12,0,46	0/0:8,0:7:23.18:0,23,292	0/1:13,2:15:55.64:56,0,198	0/1:11,1:12:0.37:0,0,317	0/0:6,0:6:17.87:0,18,213	./.	0/0:1,0:1:3.01:0,3,61	0/0:3,0:3:9.03:0,9,126	0/0:4,0:4:9.03:0,9,124	0/0:14,2:16:4.30:0,4,189	0/1:5,1:8:0.42:0,0,143	0/1:13,1:14:38.49:38,0,381	0/0:16,0:16:33.45:0,33,483
chr10	9384064	.	G	GCACACA	7588.37	PASS	AB=0.863;AC=46;AF=0.821;AN=56;BaseQRankSum=-0.957;DP=721;FS=0.000;HRun=0;HaplotypeScore=229.9171;InbreedingCoeff=0.4360;MQ=50.30;MQ0=8;MQRankSum=-2.603;QD=12.61;ReadPosRankSum=0.637;VQSLOD=3.6156;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:28,10:44:53.05:128,0,53	1/1:12,0:12:12.03:195,12,0	0/0:43,0:27:5.99:0,6,81	0/0:38,0:29:6.01:0,6,123	0/0:17,2:21:0.47:0,0,1	1/1:13,7:21:15.05:488,15,0	1/1:22,9:34:7.52:229,8,0	1/1:41,0:40:51.13:978,51,0	1/1:10,0:20:18.06:441,18,0	1/1:29,1:32:37.19:761,37,0	1/1:14,0:22:7.76:23,8,0	1/1:8,0:8:3.01:30,3,0	1/1:20,0:23:24.08:499,24,0	1/1:11,0:17:11.77:166,12,0	1/1:12,0:26:24.36:436,24,0	1/1:10,12:27:16.71:913,17,0	1/1:17,0:19:12.04:274,12,0	1/1:12,2:22:19.09:371,19,0	1/1:15,0:15:11.07:146,11,0	1/1:24,0:23:2.40:96,2,0	0/1:37,0:36:0.02:0,0,1	0/0:15,0:17:0.24:0,0,3	1/1:16,0:22:5.61:96,6,0	1/1:33,0:42:3.41:19,3,0	1/1:15,7:27:3.39:320,3,0	1/1:23,0:22:18.44:244,18,0	1/1:21,0:21:17.74:380,18,0	1/1:14,0:17:16.37:356,16,0
chr10	9384949	.	A	ACCAGATGG	7096.98	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-0.495;DP=666;FS=5.614;HRun=0;HaplotypeScore=198.8226;InbreedingCoeff=0.9966;MQ=76.44;MQ0=0;MQRankSum=-11.832;QD=92.17;ReadPosRankSum=-1.230;VQSLOD=4.2088;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:90.30:0,90,2368	0/0:6,0:6:18.06:0,18,509	0/0:16,0:16:36.11:0,36,850	0/0:20,0:20:51.15:0,51,1273	0/0:23,0:22:69.22:0,69,1845	0/0:14,0:14:39.13:0,39,1104	0/0:30,0:30:81.23:0,81,2042	0/0:30,0:30:78.26:0,78,2067	0/0:26,0:26:78.23:0,78,2060	0/0:29,0:29:84.29:0,84,2357	0/0:13,0:13:36.12:0,36,975	0/0:31,0:31:90.30:0,90,2438	0/0:34,0:34:96.30:0,96,2494	0/0:32,0:32:93.32:0,93,2591	0/0:37,0:37:99:0,108,2937	0/0:24,0:24:69.22:0,69,1854	0/0:28,0:28:78.27:0,78,2178	0/0:25,0:25:66.18:0,66,1721	1/1:12,13:26:72.19:2586,72,0	1/1:3,20:23:57.13:2401,57,0	1/1:9,17:28:50.38:2109,50,0	0/0:9,0:9:27.09:0,27,726	0/0:22,0:22:66.23:0,66,1845	0/0:25,0:25:72.25:0,72,1952	0/0:20,0:20:54.19:0,54,1482	0/0:23,0:23:69.24:0,69,1934	0/0:27,0:27:75.22:0,75,1889	0/0:12,0:12:36.08:0,36,913
chr10	9385908	.	AAT	A	2998.05	PASS	AB=0.914;AC=26;AF=0.481;AN=54;BaseQRankSum=-4.471;DP=327;FS=1.184;HRun=0;HaplotypeScore=56.3520;InbreedingCoeff=0.5733;MQ=79.41;MQ0=4;MQRankSum=-0.838;QD=16.29;ReadPosRankSum=0.232;VQSLOD=3.0626;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,10:13:18.06:221,18,0	0/0:5,0:5:12.04:0,12,147	0/0:19,0:6:3.93:0,4,11	0/0:31,0:17:14.60:0,15,146	1/1:2,18:20:39.12:480,39,0	1/1:3,13:16:33.10:406,33,0	1/1:3,3:6:6.02:74,6,0	1/1:10,23:33:72.15:834,72,0	1/1:1,0:8:17.04:84,17,0	0/0:13,0:13:24.08:0,24,391	0/1:6,2:8:52.80:53,0,216	0/1:5,1:6:20.76:21,0,121	0/0:7,0:7:14.82:0,15,130	0/0:6,0:6:2.04:0,2,6	0/1:6,0:6:24.63:25,0,132	1/1:1,3:5:11.87:125,12,0	0/0:14,0:14:33.10:0,33,386	1/1:6,12:18:27.08:332,27,0	1/1:15,0:15:8.09:52,8,0	0/1:10,0:10:9.66:48,0,10	1/1:2,0:2:0.67:33,1,0	./.	0/0:5,0:5:12.04:0,12,193	0/0:3,0:3:9.03:0,9,137	1/1:3,15:18:33.10:406,33,0	0/0:14,0:14:34.24:0,34,310	0/0:19,0:19:28.32:0,28,310	0/0:7,0:7:11.68:0,12,88
chr10	9385926	.	CAT	C	604.87	PASS	AB=0.933;AC=14;AF=0.259;AN=54;BaseQRankSum=0.001;DP=321;FS=12.147;HRun=0;HaplotypeScore=66.2710;InbreedingCoeff=0.6432;MQ=80.00;MQ0=3;MQRankSum=-1.490;QD=9.16;ReadPosRankSum=-1.299;VQSLOD=1.6402;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:14.59:0,15,97	0/0:7,0:7:2.98:0,3,14	0/0:18,0:3:4.44:0,4,49	0/0:40,0:22:35.65:0,36,383	0/0:22,0:22:47.12:0,47,335	0/0:12,0:12:30.55:0,31,139	0/0:6,0:6:14.62:0,15,168	0/0:33,0:33:82.25:0,82,780	0/0:9,0:9:23.74:0,24,207	0/0:9,0:9:24.08:0,24,411	0/0:11,0:11:23.60:0,24,317	1/1:6,1:7:9.86:118,10,0	1/1:8,0:8:11.69:121,12,0	1/1:0,3:3:3.01:39,3,0	0/0:5,0:5:11.83:0,12,163	0/0:4,0:4:11.34:0,11,57	0/1:14,0:14:1.35:90,0,1	0/0:20,0:20:45.92:0,46,380	0/0:12,0:12:26.20:0,26,239	0/0:7,0:7:15.04:0,15,169	0/0:3,0:3:3.89:0,4,31	1/1:3,0:3:9.03:117,9,0	0/0:7,0:7:18.06:0,18,296	./.	0/0:15,0:15:34.14:0,34,200	0/1:11,2:13:26.34:128,0,26	1/1:12,1:13:4.20:77,4,0	1/1:3,2:5:6.04:79,6,0
chr10	9386273	.	GAT	G	4127	PASS	AB=0.889;AC=19;AF=0.339;AN=56;BaseQRankSum=4.173;DP=616;FS=5.653;HRun=0;HaplotypeScore=137.2955;InbreedingCoeff=0.9088;MQ=61.18;MQ0=15;MQRankSum=-1.195;QD=20.53;ReadPosRankSum=6.312;VQSLOD=3.7642;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:54.56:0,55,414	1/1:1,7:7:15.03:175,15,0	0/0:33,0:15:40.38:0,40,652	0/0:39,1:17:41.88:0,42,646	0/0:21,0:21:40.58:0,41,367	0/0:23,0:23:40.94:0,41,351	0/0:24,0:24:37.48:0,37,300	0/0:47,0:47:99:0,134,1744	0/0:16,0:16:39.13:0,39,626	0/0:27,0:27:77.61:0,78,1183	0/0:13,0:13:38.99:0,39,620	1/1:0,26:26:39.13:534,39,0	1/1:2,26:28:32.01:625,32,0	1/1:1,25:26:62.86:808,63,0	0/0:29,0:29:80.96:0,81,1335	0/0:20,0:20:53.07:0,53,566	1/1:10,15:23:33.68:543,34,0	0/0:23,0:23:51.87:0,52,468	0/1:21,0:24:6.67:7,0,469	0/0:13,0:12:23.84:0,24,215	0/0:13,0:13:6.29:0,6,60	1/1:3,6:9:17.59:243,18,0	0/0:8,0:8:21.07:0,21,374	0/0:9,0:8:21:0,21,335	0/0:23,0:23:35.15:0,35,285	1/1:10,11:21:54.52:615,55,0	1/1:0,20:20:30.10:412,30,0	1/1:5,8:11:12.04:165,12,0
chr10	9386277	.	GAT	G	4208.69	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=3.798;DP=636;FS=6.378;HRun=0;HaplotypeScore=143.5200;InbreedingCoeff=0.9791;MQ=59.09;MQ0=17;MQRankSum=-1.956;QD=23.38;ReadPosRankSum=5.655;VQSLOD=4.1097;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:54.55:0,55,394	1/1:7,2:8:18.02:200,18,0	0/0:34,0:13:38.70:0,39,585	0/0:47,0:21:29.68:0,30,571	0/0:19,0:19:34.77:0,35,311	0/0:23,0:23:37.95:0,38,327	0/0:22,0:22:34.45:0,34,265	0/0:48,0:48:99:0,128,1673	0/0:15,0:15:36.12:0,36,586	0/0:31,0:31:88.92:0,89,1139	0/0:13,0:13:36.02:0,36,521	1/1:29,0:29:41.61:559,42,0	1/1:30,0:30:39.41:666,39,0	1/1:24,2:26:62.86:818,63,0	0/0:30,0:30:83.79:0,84,1311	0/0:21,0:21:53.07:0,53,564	1/1:26,0:24:32.60:535,33,0	0/0:25,0:24:42.84:0,43,446	0/0:21,0:21:59.86:0,60,869	0/0:14,0:13:23.87:0,24,338	0/0:15,0:15:6.31:0,6,78	1/1:9,0:9:21.06:269,21,0	0/0:11,0:11:25.31:0,25,347	0/0:11,0:10:26.92:0,27,355	0/0:23,0:23:32.15:0,32,258	1/1:19,0:19:48.53:562,49,0	1/1:21,0:21:33.06:414,33,0	1/1:10,0:8:15.02:186,15,0
chr10	9386281	.	GAT	G	4572.45	PASS	AB=0.909;AC=22;AF=0.393;AN=56;BaseQRankSum=-0.355;DP=640;FS=3.323;HRun=0;HaplotypeScore=142.2995;InbreedingCoeff=0.6329;MQ=59.87;MQ0=17;MQRankSum=0.304;QD=17.25;ReadPosRankSum=1.960;VQSLOD=4.6474;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:42.30:0,42,175	1/1:10,0:9:19.27:203,19,0	0/0:34,0:12:22.32:0,22,277	0/0:50,0:23:37.61:0,38,482	0/0:20,0:20:28.11:0,28,140	0/0:24,0:24:34.54:0,35,168	0/0:24,0:24:16.85:0,17,112	0/0:46,0:46:83.76:0,84,962	0/0:16,0:16:39.08:0,39,510	0/1:31,0:31:57.03:57,0,358	0/1:11,2:13:99:115,0,150	1/1:28,0:28:44.60:586,45,0	1/1:30,0:30:40.24:691,40,0	1/1:26,0:26:62.86:820,63,0	0/1:31,1:32:66.64:67,0,414	0/0:21,0:21:46.78:0,47,260	1/1:25,0:23:31.67:536,32,0	0/0:24,0:23:43.70:0,44,249	0/0:20,0:20:55.30:0,55,595	0/0:15,0:14:23.82:0,24,260	0/0:13,0:13:0.78:0,1,33	1/1:8,0:8:21.05:269,21,0	0/1:9,3:12:50.13:50,0,121	0/0:13,0:12:1.28:0,1,145	0/0:24,0:24:29.37:0,29,138	1/1:20,0:19:51.02:579,51,0	1/1:20,0:20:33.05:413,33,0	1/1:10,0:8:15.03:187,15,0
chr10	9386283	.	TAGAG	T	4707.66	PASS	AB=1.000;AC=18;AF=0.321;AN=56;BaseQRankSum=-11.905;DP=644;FS=2.461;HRun=0;HaplotypeScore=161.2249;InbreedingCoeff=0.8321;MQ=63.62;MQ0=17;MQRankSum=1.853;QD=19.95;ReadPosRankSum=1.497;VQSLOD=4.6676;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,24:30:40.58:726,41,0	0/1:10,0:9:42.18:42,0,122	0/0:38,0:14:16.53:0,17,157	0/0:54,0:24:26.59:0,27,358	1/1:3,17:20:24.08:416,24,0	1/1:3,21:24:30.10:520,30,0	1/1:3,20:24:8.10:471,8,0	1/1:12,32:44:65.04:926,65,0	0/0:18,0:18:14.56:0,15,306	0/0:28,0:28:78.16:0,78,1366	0/0:13,0:13:30.09:0,30,623	0/0:28,0:28:60.01:0,60,570	0/0:31,0:31:65.55:0,66,584	0/0:26,0:26:16.16:0,16,543	0/0:31,0:31:75.19:0,75,1570	1/1:6,16:22:12.66:549,13,0	0/0:25,0:23:41.39:0,41,404	1/1:7,17:23:37.47:580,37,0	0/0:17,0:17:21.01:0,21,174	0/0:15,0:14:13.48:0,13,93	0/1:13,0:13:4.44:8,0,4	0/0:8,0:8:20.91:0,21,195	0/0:12,0:12:30.03:0,30,486	0/0:13,0:12:30.01:0,30,444	1/1:2,23:25:27.09:469,27,0	0/0:20,0:19:14.99:0,15,393	0/0:20,0:20:36.03:0,36,346	0/0:10,0:8:15.02:0,15,143
chr10	9386300	.	AGAG	A	114.27	PASS	AB=0.846;AC=2;AF=0.036;AN=56;BaseQRankSum=2.894;DP=685;FS=11.409;HRun=0;HaplotypeScore=175.4104;InbreedingCoeff=0.1703;MQ=64.82;MQ0=11;MQRankSum=-3.532;QD=4.08;ReadPosRankSum=-0.176;VQSLOD=1.4657;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:59.66:0,60,783	0/0:12,0:11:30.10:0,30,657	0/0:45,0:21:57.38:0,57,1110	0/0:61,0:31:69.68:0,70,1250	0/0:22,0:22:36.07:0,36,495	0/0:21,0:21:42.12:0,42,567	0/0:26,0:26:41.46:0,41,630	0/0:51,0:51:99:0,128,2402	0/0:24,0:24:48.06:0,48,750	0/0:31,0:31:93.32:0,93,2220	0/0:12,0:12:36.12:0,36,877	0/0:26,0:26:75.26:0,75,1740	0/0:32,0:32:81.27:0,81,1796	0/0:26,0:26:72.23:0,72,1610	0/0:28,0:28:81.75:0,82,1937	0/0:19,0:19:45.14:0,45,669	0/0:26,0:24:54.19:0,54,1261	0/0:20,0:20:12.94:0,13,498	0/1:8,4:12:99:188,0,201	0/0:14,0:13:8:0,8,109	0/1:15,1:16:4.44:8,0,4	0/0:11,0:11:33.11:0,33,754	0/0:15,0:15:39.13:0,39,950	0/0:13,0:12:33.11:0,33,775	0/0:33,0:33:39.12:0,39,596	0/0:22,0:21:63.15:0,63,1432	0/0:20,0:20:51.18:0,51,1178	0/0:14,0:12:34:0,34,785
chr10	9386307	.	T	TAAGAC	836.96	PASS	AB=0.778;AC=5;AF=0.089;AN=56;BaseQRankSum=4.098;DP=696;FS=4.169;HRun=0;HaplotypeScore=192.3696;InbreedingCoeff=0.7553;MQ=63.82;MQ0=7;MQRankSum=-4.663;QD=18.60;ReadPosRankSum=-2.323;VQSLOD=3.1073;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:50.73:0,51,1166	0/0:11,0:10:27.09:0,27,572	0/0:43,0:21:43.25:0,43,902	0/0:56,0:31:65.11:0,65,1134	0/0:24,0:24:39.13:0,39,815	0/0:23,0:23:45.14:0,45,936	0/0:25,0:25:48.16:0,48,1034	0/0:51,0:51:99:0,132,2602	0/0:22,0:22:41.17:0,41,713	0/0:33,0:33:96.29:0,96,1953	0/0:13,0:13:39.12:0,39,823	0/0:29,0:29:84.24:0,84,1712	0/0:33,0:33:87.27:0,87,1739	0/0:26,0:26:75.24:0,75,1550	0/0:30,0:30:81.26:0,81,1707	0/0:19,0:19:48.16:0,48,1023	0/0:22,0:21:57.17:0,57,1118	0/0:19,0:19:36.12:0,36,801	0/1:10,2:14:39.78:642,0,40	1/1:1,12:13:14.88:208,15,0	1/1:3,14:18:11.89:110,12,0	0/0:12,0:12:30.10:0,30,662	0/0:17,0:17:42.14:0,42,884	0/0:17,0:16:39.10:0,39,798	0/0:32,0:32:42.12:0,42,892	0/0:25,0:24:69.22:0,69,1393	0/0:21,0:21:54.15:0,54,1039	0/0:13,0:12:36.08:0,36,714
chr10	9386311	.	CAGAT	C	585.07	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=1.518;DP=703;FS=3.374;HRun=0;HaplotypeScore=178.2443;InbreedingCoeff=0.6415;MQ=64.69;MQ0=6;MQRankSum=-1.725;QD=15.00;ReadPosRankSum=2.027;VQSLOD=3.6228;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:53.92:0,54,1175	0/0:10,0:9:24.08:0,24,602	0/0:43,0:24:58.93:0,59,1247	0/0:48,0:30:33.38:0,33,1148	0/0:24,0:24:39.12:0,39,847	0/0:22,0:22:45.14:0,45,1018	0/0:25,0:25:51.09:0,51,1020	0/0:55,0:55:99:0,150,3539	1/1:1,23:24:39.12:667,39,0	0/0:33,0:33:96.31:0,96,2395	0/0:13,0:13:39.12:0,39,988	0/0:29,0:29:81.28:0,81,2116	0/0:38,0:38:99:0,99,2104	0/0:26,0:26:72.22:0,72,1769	0/0:32,0:32:84.29:0,84,2128	0/0:19,0:19:48.16:0,48,1141	0/0:24,0:23:51.17:0,51,1280	0/0:18,0:18:33.11:0,33,733	0/1:15,0:15:24.15:24,0,400	0/0:13,0:13:18.05:0,18,262	0/0:21,0:21:20.89:0,21,266	0/0:12,0:12:33.10:0,33,789	0/0:18,0:18:48.15:0,48,1112	0/0:16,0:16:42.12:0,42,1023	0/0:32,0:32:42.14:0,42,1010	0/0:26,0:25:55.19:0,55,1700	0/0:21,0:21:57.18:0,57,1358	0/0:12,0:11:33.11:0,33,879
chr10	9386628	.	T	TC	19643.66	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-6.210;DP=673;FS=4.646;HRun=0;HaplotypeScore=80.5091;InbreedingCoeff=0.9986;MQ=69.04;MQ0=0;MQRankSum=-1.175;QD=42.98;ReadPosRankSum=5.643;VQSLOD=5.0877;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:78.26:0,78,1088	1/1:0,15:15:39.13:623,39,0	0/0:14,0:14:39.12:0,39,505	0/0:8,0:8:20.05:0,20,242	0/0:32,0:32:84.15:0,84,1118	0/0:13,0:13:33.11:0,33,461	0/0:29,0:29:84.26:0,84,1156	0/0:23,0:23:66.22:0,66,923	1/1:1,28:29:81.28:1294,81,0	1/1:0,20:20:57.19:912,57,0	1/1:0,18:18:54.18:863,54,0	1/1:0,30:30:87.30:1387,87,0	1/1:2,34:36:96.33:1528,96,0	1/1:0,32:32:81.28:1292,81,0	1/1:0,19:19:57.19:910,57,0	0/0:20,0:20:54.17:0,54,735	1/1:0,39:39:99:1726,108,0	0/0:27,0:27:81.27:0,81,1132	1/1:1,26:27:75.24:1156,75,0	1/1:1,20:21:54.18:863,54,0	1/1:0,52:52:99:2158,135,0	1/1:2,22:24:60.20:959,60,0	1/1:0,22:22:60.20:959,60,0	1/1:0,25:25:54.18:863,54,0	0/0:20,0:20:60.20:0,60,839	1/1:2,25:27:72.25:1146,72,0	1/1:0,14:14:42.14:670,42,0	1/1:0,7:7:21.07:336,21,0
chr10	9388065	.	A	AGTGT	4619.82	PASS	AB=0.848;AC=47;AF=0.979;AN=48;BaseQRankSum=-1.604;DP=653;FS=0.000;HRun=0;HaplotypeScore=157.4275;InbreedingCoeff=-0.0915;MQ=66.16;MQ0=8;MQRankSum=0.059;QD=8.03;ReadPosRankSum=1.208;VQSLOD=3.7980;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:40,0:39:10.28:187,10,0	1/1:13,0:13:11.40:239,11,0	./.	./.	1/1:15,5:23:3.01:71,3,0	1/1:13,4:19:3.30:72,3,0	1/1:21,5:30:20.54:377,21,0	1/1:36,0:36:26.78:350,27,0	1/1:14,0:15:6.02:104,6,0	1/1:29,0:29:24.06:348,24,0	1/1:7,0:8:2.93:51,3,0	1/1:19,0:19:14.38:220,14,0	1/1:15,0:15:8.99:121,9,0	1/1:16,0:23:6.49:105,6,0	1/1:23,1:25:6.02:104,6,0	1/1:12,7:20:9.03:212,9,0	0/1:23,0:27:33.62:145,0,34	1/1:12,7:23:6.02:141,6,0	1/1:22,0:22:11.97:179,12,0	1/1:17,0:17:5.90:101,6,0	1/1:42,0:42:24.01:379,24,0	./.	1/1:18,0:18:9.03:183,9,0	1/1:39,0:38:14.74:175,15,0	1/1:6,5:14:5.75:83,6,0	1/1:31,0:31:37.64:581,38,0	1/1:23,0:25:5.91:90,6,0	./.
chr10	9389383	.	ATCTCTCTC	A	1266.65	PASS	AC=10;AF=0.192;AN=52;BaseQRankSum=0.675;DP=530;FS=7.427;HRun=0;HaplotypeScore=148.2220;InbreedingCoeff=0.8980;MQ=64.58;MQ0=9;MQRankSum=-4.412;QD=15.83;ReadPosRankSum=1.873;VQSLOD=2.5273;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:15.03:0,15,374	0/0:7,0:7:9.03:0,9,217	./.	./.	0/0:29,0:28:15.52:0,16,347	0/0:23,0:24:21.04:0,21,532	0/0:19,0:19:12:0,12,254	0/0:31,0:30:25.62:0,26,384	0/0:21,0:21:21:0,21,478	1/1:17,5:23:18.42:392,18,0	1/1:8,3:12:14.98:207,15,0	0/0:10,0:12:24.03:0,24,662	0/0:14,0:14:14.28:0,14,353	0/0:15,0:21:18.06:0,18,541	1/1:9,10:19:15.05:376,15,0	0/0:16,0:19:36.12:0,36,959	0/0:23,0:27:48.13:0,48,1244	0/0:4,0:5:9.03:0,9,187	0/0:11,0:17:18.06:0,18,460	0/0:19,0:19:9.03:0,9,215	0/0:19,0:18:14.72:0,15,415	0/0:19,0:20:33.08:0,33,932	1/1:13,2:16:11.93:236,12,0	1/1:8,1:10:12.01:219,12,0	0/0:29,0:29:30.10:0,30,793	0/0:17,0:18:15.05:0,15,427	0/0:10,0:16:16.30:0,16,453	0/0:9,0:12:15.05:0,15,325
chr10	9389456	.	CTGTGTG	C	3099.12	PASS	AB=0.636;AC=15;AF=0.278;AN=54;BaseQRankSum=0.239;DP=500;FS=1.261;HRun=0;HaplotypeScore=145.8262;InbreedingCoeff=0.7952;MQ=55.02;MQ0=15;MQRankSum=-5.047;QD=21.82;ReadPosRankSum=4.115;VQSLOD=3.5387;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,14:21:15.05:318,15,0	./.	0/0:48,0:23:12.66:0,13,241	0/0:37,0:20:38.87:0,39,1035	1/1:5,10:16:17.98:294,18,0	1/1:4,11:15:18.05:342,18,0	0/1:12,15:28:38.37:679,0,38	1/1:11,7:19:24.05:409,24,0	0/0:5,0:15:27.09:0,27,724	0/0:19,0:20:54.18:0,54,1454	0/0:9,0:16:19.24:0,19,456	0/0:6,0:11:12.04:0,12,259	0/0:10,0:10:9.03:0,9,182	0/0:15,0:13:3.41:0,3,19	0/0:17,0:21:21.07:0,21,555	1/1:4,11:16:33.08:634,33,0	0/0:14,0:15:11.97:0,12,177	1/1:5,3:8:9.03:190,9,0	0/0:12,0:13:30.97:0,31,611	0/0:11,0:15:9.03:0,9,211	0/0:11,0:17:12.77:0,13,171	0/0:20,0:20:5.87:0,6,149	0/0:12,0:20:20.54:0,21,301	0/0:11,0:17:12.47:0,12,250	1/1:6,12:19:21.07:423,21,0	0/0:18,0:20:51.16:0,51,1302	0/0:17,0:16:17.97:0,18,391	0/0:6,0:6:12.04:0,12,249
chr10	9389558	.	TA	T	1563.17	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=2.093;DP=534;FS=1.178;HRun=4;HaplotypeScore=65.3948;InbreedingCoeff=0.9987;MQ=78.88;MQ0=0;MQRankSum=-0.308;QD=27.91;ReadPosRankSum=0.101;VQSLOD=2.9761;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:57.18:0,57,781	0/0:13,0:13:39.13:0,39,544	0/0:14,0:14:26.91:0,27,304	0/0:12,0:12:24.05:0,24,279	0/0:22,0:22:66.22:0,66,924	0/0:27,0:27:75.24:0,75,1034	0/0:16,0:16:42.11:0,42,555	0/0:28,0:28:81.21:0,81,1083	0/0:15,0:15:45.15:0,45,630	0/0:18,0:18:54.18:0,54,756	0/0:26,0:26:78.26:0,78,1092	0/0:18,0:18:54.18:0,54,756	0/0:15,0:15:45.15:0,45,630	0/0:18,0:18:45.15:0,45,630	0/0:23,0:23:57.19:0,57,798	0/0:17,0:17:48.16:0,48,671	0/0:15,0:15:42.11:0,42,568	0/0:20,0:20:57.19:0,57,798	1/1:3,15:18:45.11:518,45,0	1/1:0,22:22:57.17:684,57,0	1/1:2,14:16:42.13:504,42,0	0/0:21,0:21:63.21:0,63,882	0/0:24,0:24:72.24:0,72,1008	0/0:15,0:15:45.15:0,45,630	0/0:28,0:28:78.24:0,78,1073	0/0:19,0:19:54.17:0,54,739	0/0:22,0:22:66.22:0,66,924	0/0:11,0:11:33.11:0,33,462
chr10	9390762	.	GACACACACACAGACACAC	G	459.34	PASS	AC=6;AF=0.111;AN=54;BaseQRankSum=0.634;DP=683;FS=10.304;HRun=0;HaplotypeScore=246.6310;InbreedingCoeff=0.7240;MQ=56.78;MQ0=14;MQRankSum=-3.783;QD=6.38;ReadPosRankSum=-0.506;VQSLOD=0.6363;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:28.83:0,29,1322	0/0:5,0:4:3.90:0,4,199	0/0:31,0:20:6.03:0,6,601	0/0:33,0:21:8.18:0,8,608	0/0:12,0:11:12.01:0,12,190	0/0:19,0:18:30.36:0,30,1044	0/0:37,0:35:42.01:0,42,1170	0/0:35,0:31:52.20:0,52,2094	0/0:33,0:33:47.37:0,47,2517	1/1:9,3:8:23.91:361,24,0	./.	0/0:34,0:28:28.26:0,28,744	0/0:32,0:29:58.27:0,58,1796	0/0:33,0:32:23.76:0,24,302	1/1:5,30:35:5.71:175,6,0	0/0:25,0:24:27.06:0,27,1042	0/0:22,0:21:27.88:0,28,567	0/0:10,0:10:5.41:0,5,726	0/0:24,0:22:37.35:0,37,1455	0/0:21,0:20:38.99:0,39,1263	0/0:39,0:36:60.15:0,60,3266	0/0:29,0:25:20.99:0,21,198	0/0:2,11:12:0.47:0,0,1	1/1:18,3:19:5.51:46,6,0	0/0:23,0:22:18.02:0,18,1052	0/0:27,0:23:42.13:0,42,1620	0/0:24,0:21:21.04:0,21,536	0/0:8,0:7:12.04:0,12,424
chr10	9390772	.	CAG	C	425.97	PASS	AB=0.986;AC=11;AF=0.196;AN=56;BaseQRankSum=3.789;DP=662;FS=4.548;HRun=0;HaplotypeScore=123.9157;InbreedingCoeff=0.2779;MQ=46.21;MQ0=18;MQRankSum=-5.557;QD=2.38;ReadPosRankSum=-4.743;VQSLOD=-0.0241;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,1:30:27.41:0,27,302	0/0:1,2:3:3.01:0,3,47	0/0:25,0:14:5.69:0,6,217	0/0:26,0:15:1.13:0,1,150	0/0:13,0:11:4.04:0,4,66	0/0:20,1:20:28.94:0,29,275	0/0:36,0:34:41.90:0,42,361	0/1:31,1:27:99:110,0,381	0/0:32,0:32:7.85:0,8,447	1/1:15,0:9:26.76:197,27,0	0/0:8,0:6:0.47:0,0,1	0/0:32,3:29:11.35:0,11,163	0/0:31,1:27:34.22:0,34,420	0/1:34,0:33:53.23:53,0,133	1/1:34,0:32:5.90:37,6,0	0/0:29,1:29:7.27:0,7,194	0/0:22,0:21:26.95:0,27,175	0/1:11,0:10:42.53:43,0,72	0/0:20,0:18:17.83:0,18,411	0/0:23,0:22:38.93:0,39,356	0/0:38,0:34:47.95:0,48,717	0/0:22,1:20:20.98:0,21,175	0/0:14,0:12:0:0,0,0	1/1:21,0:18:8.89:65,9,0	0/0:19,0:18:17.99:0,18,211	0/1:23,1:19:54:54,0,305	0/0:30,1:26:11.89:0,12,142	0/1:8,0:6:17.46:17,0,31
chr10	9390806	.	C	CCGAG	646.62	PASS	AB=0.924;AC=16;AF=0.308;AN=52;BaseQRankSum=0.387;DP=664;FS=0.000;HRun=0;HaplotypeScore=157.1512;InbreedingCoeff=0.0492;MQ=39.41;MQ0=44;MQRankSum=-3.041;QD=1.92;ReadPosRankSum=-1.254;VQSLOD=2.3405;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:42,0:31:27.36:27,0,68	0/1:7,0:7:6:6,0,88	./.	./.	1/1:10,0:8:3.01:30,3,0	0/1:13,8:27:30.04:30,0,59	0/1:13,22:40:21.36:61,0,21	0/1:27,0:19:32.37:116,0,32	0/0:21,0:23:41.95:0,42,405	0/0:24,0:15:38.92:0,39,338	0/0:17,0:14:8.94:0,9,66	0/0:25,0:18:23.28:0,23,296	0/0:31,0:26:24.12:0,24,481	0/1:31,0:28:16.85:17,0,249	0/1:41,0:37:6.31:158,0,6	0/1:25,0:24:24.37:70,0,24	0/0:19,0:15:19.11:0,19,197	0/1:12,0:10:51.02:67,0,51	0/0:24,0:11:13.76:0,14,217	0/0:19,0:16:14.88:0,15,189	0/0:44,0:39:75.60:0,76,818	0/0:16,0:14:14.47:0,14,104	1/1:26,0:16:14.71:125,15,0	1/1:24,0:19:8.59:76,9,0	0/1:18,0:16:24.68:25,0,59	0/0:36,0:24:30.83:0,31,398	0/0:36,0:30:9.71:0,10,319	0/0:10,0:4:9.03:0,9,158
chr10	9390912	.	T	TAC	2347.41	PASS	AB=1.000;AC=8;AF=0.143;AN=56;BaseQRankSum=-6.281;DP=784;FS=0.000;HRun=0;HaplotypeScore=136.6730;InbreedingCoeff=0.7169;MQ=55.39;MQ0=18;MQRankSum=-0.754;QD=13.41;ReadPosRankSum=2.650;VQSLOD=3.3731;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:34:59.83:0,60,696	0/0:6,0:6:15.04:0,15,176	0/0:40,0:20:17.70:0,18,168	0/1:49,0:29:18.24:18,0,253	0/0:21,0:21:57.14:0,57,677	0/0:15,0:14:18.06:0,18,227	0/0:39,0:35:54.16:0,54,667	0/0:34,0:30:65.95:0,66,709	0/1:14,0:14:9.33:9,0,10	0/0:25,0:25:66.11:0,66,787	0/0:27,0:27:66.18:0,66,805	0/0:33,0:26:48.51:0,49,538	0/0:26,0:22:54.13:0,54,640	0/0:20,0:17:36.11:0,36,453	0/0:32,0:26:45.05:0,45,552	0/0:31,0:29:62.66:0,63,763	0/0:33,0:31:64.75:0,65,787	0/0:21,0:20:41.10:0,41,610	1/1:8,11:18:21.07:342,21,0	1/1:3,31:34:16.67:808,17,0	1/1:14,44:57:14.21:1318,14,0	0/0:28,0:28:72.21:0,72,883	0/0:15,0:15:39.11:0,39,476	0/0:34,0:36:47.89:0,48,538	0/0:28,0:27:72.20:0,72,879	0/0:20,0:18:35.95:0,36,430	0/0:24,0:16:24.06:0,24,288	0/0:14,0:14:42.13:0,42,526
chr10	9391032	.	GACACACACACACAC	G	616.80	PASS	AB=0.955;AC=20;AF=0.435;AN=46;BaseQRankSum=1.466;DP=599;FS=10.121;HRun=0;HaplotypeScore=144.9169;InbreedingCoeff=0.5120;MQ=42.57;MQ0=56;MQRankSum=-1.429;QD=2.74;ReadPosRankSum=1.059;VQSLOD=2.1122;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:28:24.39:0,24,1631	1/1:2,8:9:0.89:2,1,0	0/0:41,0:6:6.02:0,6,77	0/1:37,0:6:5:5,0,30	0/0:10,0:10:18.03:0,18,804	0/0:24,0:20:29.96:0,30,1416	0/0:29,0:30:69.18:0,69,2999	0/0:34,0:22:24.55:0,25,468	0/0:24,0:26:35.83:0,36,985	1/1:15,0:18:6.11:19,6,0	./.	1/1:9,4:8:3.01:44,3,0	./.	1/1:10,7:13:5.91:89,6,0	./.	0/0:25,0:24:50.18:0,50,2191	0/1:16,0:11:8.24:8,0,33	0/0:13,0:23:30.10:0,30,1492	0/0:13,0:11:9.02:0,9,111	./.	0/1:26,0:18:0:0,0,0	./.	1/1:7,2:5:2.92:17,3,0	1/1:18,0:11:2.22:7,2,0	0/0:25,0:23:48.14:0,48,2246	0/1:14,4:8:74.35:165,0,74	1/1:6,14:10:6.02:216,6,0	1/1:7,1:7:15.03:194,15,0
chr10	9391154	.	C	CAGAGAGAGAG	2030.10	PASS	AB=0.860;AC=25;AF=0.463;AN=54;BaseQRankSum=-0.947;DP=592;FS=38.083;HRun=0;HaplotypeScore=163.3571;InbreedingCoeff=0.4808;MQ=38.65;MQ0=28;MQRankSum=-2.539;QD=6.53;ReadPosRankSum=-0.882;VQSLOD=0.9804;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:23:2.37:0,2,49	1/1:8,0:8:3.01:32,3,0	0/0:3,0:1:3.01:0,3,47	0/0:13,0:4:6.02:0,6,72	0/0:21,0:20:15.04:0,15,225	0/0:26,0:24:15.05:0,15,301	0/1:21,0:19:3.12:3,0,336	1/1:30,0:21:21.04:285,21,0	0/0:36,0:30:18.42:0,18,301	0/1:24,0:22:70.65:71,0,205	1/1:11,0:11:3.01:34,3,0	0/1:6,0:23:0:0,0,0	1/1:25,1:22:9.50:198,9,0	./.	0/0:25,0:19:6:0,6,55	0/1:15,0:20:27.86:28,0,66	1/1:22,0:20:6.49:115,6,0	1/1:9,0:8:9.90:138,10,0	0/0:11,0:9:14.89:0,15,321	0/0:17,0:17:17.71:0,18,443	0/0:24,0:20:18.06:0,18,419	1/1:18,1:17:11.95:190,12,0	0/0:22,0:13:11.21:0,11,190	0/1:27,0:25:16.01:16,0,81	0/0:29,0:23:1.52:0,2,22	1/1:18,10:24:23.96:708,24,0	1/1:21,0:19:8.96:164,9,0	1/1:14,0:9:13.64:228,14,0
chr10	9391448	.	CTTGCTTGTGCTT	C	8468.39	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=13.385;DP=675;FS=2.014;HRun=0;HaplotypeScore=241.5524;InbreedingCoeff=0.9994;MQ=91.07;MQ0=0;MQRankSum=-12.671;QD=83.02;ReadPosRankSum=2.026;VQSLOD=4.7445;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,129,7125	0/0:14,0:14:42.14:0,42,2445	0/0:32,0:32:87.30:0,87,3675	0/0:28,0:28:73.67:0,74,3489	0/0:26,0:25:72.25:0,72,4232	0/0:24,0:24:69.24:0,69,4186	0/0:26,0:26:78.27:0,78,4429	0/0:29,0:29:87.30:0,87,5066	0/0:28,0:28:81.26:0,81,4864	1/1:3,21:24:66.16:2213,66,0	1/1:0,12:10:30.10:1139,30,0	0/0:26,0:26:75.26:0,75,4594	0/0:23,0:23:69.24:0,69,3780	0/0:20,0:20:51.18:0,51,2933	1/1:2,19:21:51.09:1924,51,0	0/0:24,0:24:72.25:0,72,4409	0/0:32,0:32:96.33:0,96,5827	0/0:14,0:14:42.14:0,42,2339	0/0:19,0:19:51.17:0,51,2377	0/0:34,0:34:93.32:0,93,4667	0/0:24,0:24:72.23:0,72,3710	0/0:15,0:15:42.14:0,42,2332	1/1:2,19:21:47.77:1708,48,0	1/1:5,19:24:41.86:1484,42,0	0/0:26,0:25:72.25:0,72,4269	0/0:25,0:25:75.25:0,75,4416	0/0:31,0:31:93.32:0,93,5544	0/0:9,0:8:24.08:0,24,1487
chr10	9391966	.	CTT	C	4477.42	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=1.732;DP=504;FS=0.374;HRun=11;HaplotypeScore=69.4239;InbreedingCoeff=0.9951;MQ=69.49;MQ0=0;MQRankSum=-1.862;QD=26.81;ReadPosRankSum=2.108;VQSLOD=5.0845;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:42.13:0,42,620	1/1:1,13:14:38.46:391,38,0	0/0:8,0:7:18.05:0,18,238	0/0:8,0:8:14.41:0,14,162	0/0:21,0:23:65.70:0,66,957	0/0:18,0:18:42.14:0,42,647	0/0:16,0:16:39.13:0,39,600	0/0:26,1:28:56.45:0,56,767	0/0:5,0:21:42.45:0,42,169	0/0:4,0:21:42.42:0,42,145	0/0:4,0:24:47.34:0,47,188	1/1:4,17:21:48.10:511,48,0	1/1:3,20:23:54.13:575,54,0	1/1:2,9:11:27.06:287,27,0	0/0:1,0:16:27.45:0,27,94	0/0:14,0:14:36.12:0,36,554	1/1:2,18:20:51.12:543,51,0	0/0:12,0:13:35.61:0,36,512	0/0:18,0:23:43.91:0,44,578	0/0:26,0:27:78.26:0,78,1182	0/0:9,0:9:27.06:0,27,381	1/1:0,11:11:33.08:351,33,0	0/0:1,0:15:34.93:0,35,120	0/0:2,0:16:27.45:0,27,94	0/0:22,0:22:57.18:0,57,857	1/1:1,25:26:75.17:798,75,0	1/1:3,20:23:54.12:575,54,0	1/1:3,15:18:42.09:447,42,0
chr10	9392120	.	AT	A	1904.48	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.885;DP=538;FS=8.658;HRun=5;HaplotypeScore=52.7159;InbreedingCoeff=0.9988;MQ=78.07;MQ0=0;MQRankSum=-0.999;QD=26.82;ReadPosRankSum=-1.225;VQSLOD=2.3710;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:90.25:0,90,1166	0/0:9,0:9:27.09:0,27,369	0/0:14,0:14:42.12:0,42,514	0/0:12,0:12:29.57:0,30,340	0/0:16,0:16:45.14:0,45,598	0/0:19,0:19:54.17:0,54,723	0/0:12,0:12:33.10:0,33,435	0/0:33,0:33:96.29:0,96,1270	0/0:20,0:20:57.19:0,57,779	0/0:11,0:11:33.10:0,33,439	0/0:17,0:17:48.10:0,48,606	0/0:26,0:26:75.25:0,75,1022	0/0:19,0:19:54.18:0,54,739	0/0:12,0:12:36.12:0,36,492	0/0:13,0:13:39.12:0,39,519	0/0:13,0:13:30.09:0,30,394	0/0:25,0:25:72.23:0,72,968	0/0:21,0:21:57.15:0,57,758	1/1:2,25:27:75.18:831,75,0	1/1:2,27:29:75.09:808,75,0	1/1:0,15:15:36.10:408,36,0	0/0:14,0:14:42.14:0,42,572	0/0:23,0:23:60.20:0,60,820	0/0:23,0:23:60.20:0,60,821	0/0:24,0:24:72.23:0,72,967	0/0:26,0:26:75.24:0,75,1013	0/0:23,0:23:63.21:0,63,861	0/0:11,0:11:33.08:0,33,418
chr10	9393981	.	AACACACACACAC	A	1621.84	PASS	AB=0.942;AC=26;AF=0.565;AN=46;BaseQRankSum=1.848;DP=453;FS=19.013;HRun=0;HaplotypeScore=155.9711;InbreedingCoeff=-0.2367;MQ=71.70;MQ0=13;MQRankSum=3.341;QD=5.50;ReadPosRankSum=0.211;VQSLOD=1.7404;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:10,11:22:3.01:101,3,0	0/1:11,0:11:13.66:189,0,14	./.	./.	1/1:12,2:14:3.01:65,3,0	0/1:12,4:16:0:0,0,0	0/0:15,2:16:0.11:0,0,0	0/0:18,0:16:3.93:0,4,13	1/1:10,0:16:2.75:91,3,0	0/1:15,0:14:56.35:56,0,83	./.	0/1:12,0:12:43.72:44,0,64	0/1:23,0:23:28.87:85,0,29	0/1:12,1:13:70.77:122,0,71	0/1:12,0:11:14.48:58,0,14	1/1:8,7:15:6.02:138,6,0	0/1:27,0:25:76.95:77,0,79	1/1:12,0:10:3.01:48,3,0	1/1:4,0:5:2.21:37,2,0	./.	0/0:17,0:16:0.47:0,0,1	./.	0/1:9,0:10:25.94:62,0,26	0/1:24,0:23:4.95:149,0,5	0/1:16,3:20:0:0,0,0	1/1:17,0:18:3.10:327,3,0	0/0:10,0:17:3.01:0,3,38	0/1:7,0:7:59.21:93,0,59
chr10	9394033	.	CAGAGAG	C	3966.07	PASS	AB=0.834;AC=27;AF=0.540;AN=50;BaseQRankSum=0.602;DP=559;FS=45.145;HRun=0;HaplotypeScore=154.9591;InbreedingCoeff=0.5384;MQ=41.72;MQ0=52;MQRankSum=3.563;QD=11.33;ReadPosRankSum=1.780;VQSLOD=1.5391;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:34:17.96:0,18,331	1/1:9,0:8:3.01:55,3,0	./.	./.	0/1:16,0:16:48.30:48,0,183	0/1:24,0:23:37.90:38,0,161	0/0:26,0:21:12.98:0,13,304	0/0:25,0:23:12:0,12,174	1/1:17,0:17:14.81:290,15,0	1/1:16,0:20:17.96:225,18,0	./.	1/1:22,0:20:23.84:376,24,0	0/1:13,0:20:10.28:42,0,10	1/1:30,0:30:17.48:332,17,0	0/1:9,0:10:0:0,0,1	0/0:23,0:21:15.05:0,15,365	1/1:29,0:23:25.24:466,25,0	0/0:13,0:9:20.96:0,21,307	0/0:16,0:12:6.02:0,6,104	0/0:17,0:16:0:0,0,0	0/0:18,0:10:0.47:0,0,1	1/1:17,0:17:5.70:109,6,0	0/1:10,10:19:0.15:0,0,0	1/1:32,0:28:21.05:369,21,0	0/0:16,0:13:3.01:0,3,71	1/1:19,13:32:39.06:726,39,0	1/1:25,0:24:32.94:630,33,0	1/1:22,0:17:14.93:260,15,0
chr10	9394435	.	T	TGA	572.77	PASS	AB=0.781;AC=13;AF=0.232;AN=56;BaseQRankSum=7.041;DP=550;FS=5.439;HRun=0;HaplotypeScore=107.8569;InbreedingCoeff=0.1985;MQ=75.86;MQ0=5;MQRankSum=-2.581;QD=2.91;ReadPosRankSum=-0.591;VQSLOD=2.0423;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:22:2.78:0,3,255	0/0:8,0:13:10.96:0,11,87	0/0:33,0:25:75.06:0,75,743	0/0:26,0:21:62.72:0,63,583	0/1:10,0:18:18.15:18,0,216	0/0:22,0:23:17.98:0,18,258	0/1:13,0:19:35.34:35,0,240	0/0:23,0:22:39.97:0,40,481	0/0:11,0:13:36.01:0,36,412	0/0:13,0:13:34.71:0,35,266	0/1:17,0:16:8.06:8,0,19	0/1:9,0:17:13.67:14,0,144	0/0:6,0:12:9.20:0,9,93	0/0:8,0:18:12.08:0,12,140	0/0:17,0:22:27.28:0,27,263	0/0:12,0:19:18.05:0,18,175	0/0:16,0:30:18.97:0,19,244	0/1:21,0:31:48.89:49,0,348	1/1:12,2:14:9.20:282,9,0	1/1:1,14:17:10.08:246,10,0	1/1:5,23:31:2.93:60,3,0	0/0:7,0:13:14.26:0,14,123	0/1:18,0:18:0.08:0,0,103	0/0:20,0:27:12.21:0,12,222	0/0:11,0:17:1.67:0,2,152	0/0:15,0:15:30.95:0,31,265	0/0:10,0:14:10.67:0,11,151	0/1:4,0:13:10.51:11,0,58
chr10	9396978	.	T	TTC	2905.49	PASS	AC=46;AF=0.885;AN=52;BaseQRankSum=4.920;DP=766;FS=0.000;HRun=0;HaplotypeScore=163.0818;InbreedingCoeff=0.6484;MQ=59.60;MQ0=9;MQRankSum=-3.148;QD=4.59;ReadPosRankSum=-2.155;VQSLOD=2.7067;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:37,0:37:20.97:186,21,0	1/1:15,0:15:8.92:82,9,0	./.	./.	1/1:32,0:31:14.97:121,15,0	1/1:18,0:16:3.26:26,3,0	1/1:17,0:25:7.72:36,8,0	1/1:47,0:47:12.80:89,13,0	1/1:20,14:39:5.66:420,6,0	0/0:34,0:33:26.66:0,27,252	0/0:22,0:20:8.96:0,9,96	1/1:31,0:31:16.73:144,17,0	1/1:34,0:34:33.93:374,34,0	1/1:18,0:18:0.47:1,0,0	0/0:28,0:29:35.90:0,36,360	1/1:15,1:31:17.87:169,18,0	1/1:20,0:20:17.09:115,17,0	1/1:9,0:9:4.51:23,5,0	1/1:29,0:26:11.95:93,12,0	1/1:29,0:30:10.78:75,11,0	1/1:27,0:27:14.97:122,15,0	1/1:28,0:27:5.98:47,6,0	1/1:24,1:25:28.49:242,28,0	1/1:14,2:30:23.01:209,23,0	1/1:27,0:27:2.75:44,3,0	1/1:28,0:25:16.43:127,16,0	1/1:34,0:32:21.70:241,22,0	1/1:17,0:16:6.01:62,6,0
chr10	9398997	.	CAA	C	9963.16	PASS	AB=0.929;AC=47;AF=0.839;AN=56;BaseQRankSum=-0.595;DP=565;FS=3.239;HRun=13;HaplotypeScore=77.3507;InbreedingCoeff=0.8653;MQ=75.24;MQ0=3;MQRankSum=-1.429;QD=19.93;ReadPosRankSum=3.428;VQSLOD=4.6112;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,19:24:45.01:435,45,0	1/1:4,8:12:21.01:204,21,0	0/0:23,0:18:31.46:0,31,322	0/1:12,0:10:17.31:17,0,91	1/1:3,21:27:53.42:489,53,0	1/1:5,23:27:63.05:611,63,0	1/1:2,19:23:50.53:460,51,0	1/1:2,21:24:53.99:573,54,0	1/1:0,17:18:38.98:428,39,0	1/1:7,16:23:48.03:465,48,0	1/1:3,17:20:44.98:436,45,0	1/1:3,26:28:56.79:602,57,0	1/1:2,22:24:57.09:553,57,0	1/1:3,20:23:51.06:495,51,0	1/1:8,19:28:41.93:457,42,0	1/1:4,12:17:23.95:282,24,0	1/1:5,18:24:44.97:486,45,0	1/1:4,9:13:27.03:262,27,0	0/0:4,0:10:24.05:0,24,245	0/0:19,0:20:54.13:0,54,695	0/0:12,0:12:30.10:0,30,434	1/1:3,13:16:34.31:346,34,0	1/1:2,17:19:40.76:405,41,0	1/1:2,15:18:38.80:361,39,0	1/1:2,11:13:24.02:233,24,0	1/1:6,20:26:56.75:536,57,0	1/1:5,23:29:68.83:652,69,0	1/1:0,8:8:18.03:175,18,0
chr10	9399155	.	TTAG	T	2250.98	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.546;DP=724;FS=9.714;HRun=0;HaplotypeScore=99.1341;InbreedingCoeff=0.9993;MQ=80.23;MQ0=0;MQRankSum=-1.227;QD=39.49;ReadPosRankSum=-1.505;VQSLOD=4.2847;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:87.30:0,87,1971	0/0:14,0:14:42.14:0,42,951	0/0:22,0:22:60.21:0,60,1306	0/0:16,0:16:29.86:0,30,676	0/0:35,0:35:99:0,102,2242	0/0:33,0:33:96.32:0,96,2078	0/0:32,0:32:93.32:0,93,2106	0/0:35,0:35:99:0,99,2181	0/0:25,0:25:72.25:0,72,1632	0/0:31,0:31:87.30:0,87,1950	0/0:32,0:32:90.31:0,90,1993	0/0:32,0:32:93.32:0,93,2074	0/0:29,0:29:84.27:0,84,1854	0/0:23,0:23:63.22:0,63,1428	0/0:29,0:29:81.28:0,81,1836	0/0:22,0:22:66.23:0,66,1496	0/0:28,0:28:81.28:0,81,1802	0/0:12,0:12:33.11:0,33,748	1/1:1,14:15:42.14:695,42,0	1/1:2,26:28:81.16:1249,81,0	1/1:2,12:14:27.09:450,27,0	0/0:33,0:33:93.32:0,93,2082	0/0:26,0:26:69.24:0,69,1540	0/0:19,0:19:57.20:0,57,1266	0/0:33,0:33:96.31:0,96,2098	0/0:32,0:32:93.32:0,93,2077	0/0:28,0:28:81.28:0,81,1826	0/0:16,0:16:42.14:0,42,952
chr10	9400120	.	A	AGT	425.44	PASS	AB=0.921;AC=18;AF=0.391;AN=46;BaseQRankSum=-1.976;DP=606;FS=2.382;HRun=0;HaplotypeScore=87.5014;InbreedingCoeff=0.0408;MQ=65.63;MQ0=22;MQRankSum=0.573;QD=1.54;ReadPosRankSum=-0.089;VQSLOD=1.8534;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:10.96:0,11,91	./.	./.	./.	0/1:19,0:19:25.64:36,0,26	0/0:22,0:23:2.83:0,3,14	0/1:21,1:23:33.82:34,0,64	./.	0/0:14,0:16:2.84:0,3,14	0/1:15,0:15:13.84:14,0,25	1/1:18,1:19:0.47:1,0,0	0/0:22,0:25:8.85:0,9,77	0/0:13,0:13:5.99:0,6,53	0/0:21,0:20:2.67:0,3,13	0/1:23,2:29:26.08:37,0,26	0/0:27,0:24:14.87:0,15,140	0/1:25,1:28:19.96:20,0,144	0/0:20,0:20:11.77:0,12,106	1/1:19,0:19:9.03:116,9,0	1/1:18,0:17:2.99:24,3,0	1/1:31,0:26:11.90:169,12,0	./.	0/1:16,0:16:0:0,0,0	0/1:17,8:28:62:72,0,62	0/0:17,0:20:5.84:0,6,45	1/1:17,0:17:0.94:2,1,0	0/1:12,2:15:34.62:35,0,37	0/0:7,0:7:3:0,3,31
chr10	9400840	.	G	GA	22219.93	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-13.169;DP=823;FS=2.142;HRun=0;HaplotypeScore=84.8193;InbreedingCoeff=0.9998;MQ=86.06;MQ0=0;MQRankSum=-6.159;QD=44.53;ReadPosRankSum=4.702;VQSLOD=4.8944;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,135,1869	1/1:0,10:10:27.09:432,27,0	0/0:25,0:25:66.21:0,66,896	0/0:29,0:29:87:0,87,1126	0/0:38,0:38:99:0,114,1594	0/0:23,0:23:69.23:0,69,965	0/0:30,0:30:90.29:0,90,1243	0/0:45,0:45:99:0,132,1817	1/1:1,25:26:69.24:1100,69,0	1/1:2,34:36:99:1603,102,0	1/1:0,29:29:81.28:1295,81,0	1/1:1,26:27:72.25:1151,72,0	1/1:0,29:29:87.30:1391,87,0	1/1:0,27:27:81.28:1295,81,0	1/1:0,43:43:99:1919,120,0	0/0:32,0:32:96.32:0,96,1342	1/1:0,26:26:72.25:1151,72,0	0/0:20,0:20:60.17:0,60,818	1/1:2,33:35:99:1557,99,0	1/1:0,30:30:87.30:1391,87,0	1/1:0,25:25:66.23:1055,66,0	1/1:0,23:23:57.19:911,57,0	1/1:1,30:31:74.96:1199,75,0	1/1:0,36:36:99:1727,108,0	0/0:37,0:37:99:0,108,1472	1/1:0,29:29:87.28:1363,87,0	1/1:2,22:24:66.22:1055,66,0	1/1:0,13:13:39.13:623,39,0
chr10	9401859	.	TA	T	7331.41	PASS	AB=0.983;AC=48;AF=0.857;AN=56;BaseQRankSum=1.652;DP=667;FS=2.454;HRun=1;HaplotypeScore=186.4838;InbreedingCoeff=-0.1536;MQ=77.76;MQ0=0;MQRankSum=-1.651;QD=10.99;ReadPosRankSum=10.861;VQSLOD=2.0340;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:39,0:39:8.91:373,9,0	1/1:13,0:13:15.14:158,15,0	0/1:25,0:25:51.51:117,0,52	0/1:18,1:19:0.32:156,0,0	1/1:27,3:29:36.49:329,36,0	1/1:26,0:26:71.79:399,72,0	0/1:16,0:16:27.97:155,0,28	1/1:32,2:34:30.02:295,30,0	1/1:32,0:32:44.25:412,44,0	0/1:25,0:25:14.51:202,0,15	0/1:20,1:21:13.89:213,0,14	1/1:35,0:35:24.68:399,25,0	1/1:24,1:25:68.91:417,69,0	0/1:22,1:23:9.89:242,0,10	1/1:21,0:21:39.60:270,40,0	1/1:33,0:33:75.64:460,76,0	1/1:20,1:21:14.81:247,15,0	0/1:15,0:15:22.62:116,0,23	1/1:21,0:21:31.05:196,31,0	1/1:29,0:29:53.27:371,53,0	1/1:26,0:26:32.58:253,33,0	1/1:27,1:28:29.56:374,30,0	1/1:22,1:23:36.26:280,36,0	1/1:20,0:20:18.77:199,19,0	0/1:16,0:16:3.49:156,0,3	1/1:20,0:20:16.42:178,16,0	1/1:28,0:28:32.24:338,32,0	1/1:3,0:3:5.60:28,6,0
chr10	9402396	.	GATAA	G	1469.34	PASS	AB=0.750;AC=25;AF=0.694;AN=36;BaseQRankSum=-2.456;DP=234;FS=3.322;HRun=0;HaplotypeScore=39.2959;InbreedingCoeff=0.4213;MQ=74.91;MQ0=1;MQRankSum=1.183;QD=9.54;ReadPosRankSum=1.703;VQSLOD=1.5501;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:8,4:12:17.47:142,0,17	1/1:4,1:5:3.01:46,3,0	./.	./.	0/0:7,0:7:3.01:0,3,70	1/1:8,5:13:9.03:139,9,0	./.	1/1:37,0:36:2.98:21,3,0	0/0:4,0:6:3.01:0,3,52	0/0:4,0:6:9.03:0,9,137	./.	1/1:6,1:7:3.01:46,3,0	./.	1/1:1,2:3:6.02:92,6,0	0/0:6,0:8:12.04:0,12,218	1/1:1,2:3:6.02:92,6,0	1/1:10,14:24:30.10:462,30,0	0/0:4,0:4:0.47:0,0,1	1/1:11,4:15:12.04:185,12,0	1/1:10,4:14:11.93:155,12,0	1/1:5,0:6:3:28,3,0	./.	./.	./.	./.	1/1:6,3:9:9.03:139,9,0	1/1:6,0:6:3.01:46,3,0	./.
chr10	9403379	.	GGAAA	G	4057.05	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=11.292;DP=729;FS=2.022;HRun=0;HaplotypeScore=162.0838;InbreedingCoeff=0.9988;MQ=65.35;MQ0=4;MQRankSum=-4.769;QD=33.25;ReadPosRankSum=1.880;VQSLOD=3.8771;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,138,3469	0/0:11,0:11:24.07:0,24,517	0/0:33,0:23:26.81:0,27,1281	0/0:50,0:35:35.24:0,35,834	0/0:32,0:32:90.30:0,90,2208	0/0:22,0:22:60.21:0,60,1527	0/0:17,0:17:51.18:0,51,1253	0/0:27,0:27:66.23:0,66,1556	0/0:19,0:19:51.16:0,51,1241	1/1:1,23:24:62.84:1079,63,0	1/1:2,15:17:27.09:491,27,0	0/0:19,0:19:57.20:0,57,1457	0/0:29,0:29:72.24:0,72,1745	0/0:21,0:21:57.18:0,57,1417	1/1:4,37:41:75.21:1326,75,0	0/0:23,0:23:69.23:0,69,1729	0/0:30,0:30:81.15:0,81,1813	0/0:15,0:15:36.11:0,36,846	0/0:27,0:27:69.23:0,69,1670	0/0:25,0:25:69.19:0,69,1543	0/0:36,0:36:99:0,102,2460	0/0:23,0:23:66.23:0,66,1688	1/1:3,19:22:35.90:619,36,0	1/1:3,15:18:30.10:542,30,0	0/0:23,0:23:63.20:0,63,1501	0/0:21,0:21:57.19:0,57,1365	0/0:34,0:34:93.31:0,93,2316	0/0:20,0:20:51.17:0,51,1300
chr10	9404391	.	TAC	T	1844.47	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.443;DP=768;FS=3.878;HRun=0;HaplotypeScore=93.6264;InbreedingCoeff=0.9916;MQ=71.52;MQ0=3;MQRankSum=-1.404;QD=22.77;ReadPosRankSum=3.353;VQSLOD=4.0425;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:53,1:54:82.20:0,82,1881	0/0:12,0:12:36.11:0,36,573	0/0:37,0:32:65.89:0,66,1023	0/0:36,0:33:66.53:0,67,1170	0/0:32,1:33:55.09:0,55,1407	0/0:29,0:29:69.22:0,69,1128	0/0:33,0:33:84.24:0,84,1318	0/0:41,0:41:99:0,99,1580	0/0:18,0:18:48.09:0,48,720	0/0:36,0:36:99:0,102,1635	0/0:18,0:18:48.13:0,48,746	0/0:20,0:20:54.18:0,54,879	0/0:28,0:28:78.25:0,78,1273	0/0:19,0:19:51.17:0,51,844	0/0:37,0:37:96.31:0,96,1558	0/0:20,0:20:54.18:0,54,904	0/0:35,0:36:93.32:0,93,1556	0/0:20,0:20:57.19:0,57,938	1/1:5,6:11:18.06:229,18,0	1/1:3,25:28:63.20:802,63,0	1/1:4,38:41:75.24:955,75,0	0/0:24,0:24:69.20:0,69,1094	0/0:32,2:34:16.90:0,17,1316	0/0:24,1:25:28.02:0,28,989	0/0:19,0:19:57.18:0,57,929	0/0:28,0:28:72.23:0,72,1157	0/0:22,0:22:66.20:0,66,1074	0/0:7,0:7:21.07:0,21,351
chr10	9404601	.	CTTAGTGTCCTGAG	C	14408.29	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=15.489;DP=687;FS=1.641;HRun=0;HaplotypeScore=260.3099;InbreedingCoeff=0.9939;MQ=81.69;MQ0=0;MQRankSum=-16.438;QD=84.26;ReadPosRankSum=6.285;VQSLOD=4.1653;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,111,7166	1/1:1,7:8:21.07:839,21,0	0/0:26,0:26:71.71:0,72,3517	0/0:17,0:17:45.03:0,45,2427	0/0:32,0:32:96.31:0,96,6033	0/0:31,0:31:87.30:0,87,5484	0/0:34,0:34:99:0,102,6457	0/0:39,0:39:99:0,114,6429	0/0:19,0:19:54.19:0,54,3449	0/0:42,0:42:99:0,120,7023	0/0:27,0:27:78.27:0,78,4980	1/1:5,24:29:69.24:2755,69,0	1/1:1,19:20:48.16:1914,48,0	1/1:5,16:21:39.13:1557,39,0	0/0:34,0:34:99:0,102,6113	0/0:28,0:28:84.29:0,84,5391	1/1:6,10:16:21.07:801,21,0	0/0:13,0:13:39.13:0,39,2561	0/0:19,0:19:48.16:0,48,2847	0/0:28,0:28:81.28:0,81,5067	0/0:20,0:20:57.20:0,57,3583	1/1:2,21:23:60.21:2395,60,0	0/0:19,0:19:57.20:0,57,3528	0/0:23,0:23:66.23:0,66,3878	0/0:27,0:27:81.28:0,81,4925	1/1:5,18:23:54.19:2110,54,0	1/1:9,15:24:39.03:1557,39,0	1/1:1,6:7:12.04:479,12,0
chr10	9405159	.	A	ATTT	1353.78	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.384;DP=590;FS=16.517;HRun=0;HaplotypeScore=93.9077;InbreedingCoeff=0.9984;MQ=86.79;MQ0=0;MQRankSum=-8.028;QD=34.71;ReadPosRankSum=-1.300;VQSLOD=2.9570;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:84.29:0,84,1542	0/0:10,0:10:27.09:0,27,495	0/0:27,0:27:75.23:0,75,1341	0/0:22,0:22:45.10:0,45,780	0/0:17,0:17:51.17:0,51,949	0/0:22,0:22:66.23:0,66,1205	0/0:28,0:28:81.28:0,81,1493	0/0:24,0:24:72.25:0,72,1336	0/0:22,0:22:63.20:0,63,1133	0/0:34,0:34:99:0,102,1895	0/0:13,0:13:39.13:0,39,707	0/0:19,0:19:48.16:0,48,859	0/0:29,0:29:87.30:0,87,1597	0/0:21,0:21:57.20:0,57,1062	0/0:37,0:37:99:0,102,1862	0/0:30,0:30:84.29:0,84,1565	0/0:27,0:27:75.21:0,75,1329	0/0:12,0:12:33.11:0,33,615	1/1:3,9:13:30.97:520,31,0	1/1:1,9:10:27.09:490,27,0	1/1:2,10:16:33.50:486,33,0	0/0:22,0:22:66.21:0,66,1180	0/0:9,0:9:27.09:0,27,494	0/0:27,0:27:75.26:0,75,1390	0/0:18,0:18:54.19:0,54,997	0/0:21,0:21:63.22:0,63,1162	0/0:21,0:21:63.22:0,63,1156	0/0:10,0:10:30.10:0,30,559
chr10	9405160	.	C	CTG	1199.23	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.408;DP=592;FS=26.947;HRun=0;HaplotypeScore=84.6853;InbreedingCoeff=0.9985;MQ=86.18;MQ0=0;MQRankSum=-8.095;QD=29.25;ReadPosRankSum=-1.271;VQSLOD=2.0596;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:84.27:0,84,1336	0/0:10,0:10:27.09:0,27,427	0/0:28,0:28:78.25:0,78,1201	0/0:20,0:20:43.97:0,44,650	0/0:17,0:17:51.17:0,51,824	0/0:23,0:23:66.18:0,66,1044	0/0:28,0:28:84.24:0,84,1333	0/0:25,0:25:72.25:0,72,1172	0/0:22,0:22:60.20:0,60,967	0/0:34,0:34:99:0,102,1643	0/0:13,0:13:39.09:0,39,607	0/0:19,0:19:48.11:0,48,727	0/0:30,0:30:87.25:0,87,1386	0/0:21,0:21:57.19:0,57,927	0/0:37,0:37:99:0,102,1612	0/0:30,0:30:84.29:0,84,1366	0/0:25,0:25:72.24:0,72,1151	0/0:12,0:12:33.11:0,33,531	1/1:6,9:15:39.18:514,39,0	1/1:0,9:9:27.09:369,27,0	1/1:7,10:17:36.07:459,36,0	0/0:22,0:22:66.18:0,66,1044	0/0:9,0:9:27.09:0,27,440	0/0:27,0:27:75.25:0,75,1200	0/0:18,0:18:54.18:0,54,873	0/0:21,0:21:63.22:0,63,1021	0/0:21,0:21:63.17:0,63,983	0/0:10,0:10:30.10:0,30,489
chr10	9406224	.	TACTC	T	2435.08	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=10.148;DP=669;FS=0.563;HRun=0;HaplotypeScore=107.8934;InbreedingCoeff=0.9996;MQ=87.67;MQ0=0;MQRankSum=-3.127;QD=40.58;ReadPosRankSum=0.312;VQSLOD=3.8060;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:81.26:0,81,2125	0/0:17,0:17:51.18:0,51,1359	0/0:26,0:26:63.20:0,63,1504	0/0:24,0:24:66.23:0,66,1635	0/0:24,0:24:72.25:0,72,1943	0/0:25,0:25:72.25:0,72,1928	0/0:23,0:23:69.22:0,69,1805	0/0:34,0:34:99:0,99,2562	0/0:17,0:17:51.18:0,51,1375	0/0:23,0:23:66.23:0,66,1769	0/0:23,0:23:69.24:0,69,1858	0/0:27,0:27:78.27:0,78,2106	0/0:25,0:25:66.23:0,66,1782	0/0:30,0:30:90.31:0,90,2426	0/0:42,0:42:99:0,120,3204	0/0:25,0:25:69.24:0,69,1790	0/0:20,0:19:57.20:0,57,1491	0/0:14,0:14:39.13:0,39,1016	1/1:1,18:19:54.16:983,54,0	1/1:2,18:20:54.19:1025,54,0	1/1:5,16:21:30.57:570,31,0	0/0:24,0:24:69.24:0,69,1841	0/0:32,0:32:93.32:0,93,2454	0/0:21,0:21:57.20:0,57,1524	0/0:24,0:24:66.23:0,66,1781	0/0:25,0:25:72.25:0,72,1944	0/0:26,0:26:75.26:0,75,1990	0/0:11,0:11:30.10:0,30,810
chr10	9407128	.	A	AG	18937.13	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=1.805;DP=735;FS=3.204;HRun=1;HaplotypeScore=102.6894;InbreedingCoeff=0.9992;MQ=92.05;MQ0=0;MQRankSum=-5.597;QD=41.17;ReadPosRankSum=3.395;VQSLOD=4.9791;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,117,1504	1/1:0,10:10:27.09:405,27,0	0/0:30,0:30:90.18:0,90,1110	0/0:33,0:33:86.56:0,87,1022	0/0:22,0:22:66.20:0,66,842	0/0:23,0:23:66.21:0,66,857	0/0:25,0:25:75.21:0,75,943	0/0:30,0:30:87.28:0,87,1130	1/1:0,38:38:99:1708,114,0	1/1:1,15:16:44.36:636,44,0	1/1:1,18:19:48.16:719,48,0	1/1:0,29:29:87.29:1302,87,0	1/1:1,19:20:54.18:806,54,0	1/1:0,41:41:99:1752,117,0	1/1:1,43:44:99:1663,111,0	0/0:34,0:34:96.31:0,96,1246	1/1:0,20:20:60.20:899,60,0	0/0:16,0:16:48.12:0,48,605	1/1:1,19:20:57.19:851,57,0	1/1:0,36:36:99:1498,105,0	1/1:5,42:47:99:1618,108,0	1/1:0,17:17:48.16:718,48,0	1/1:0,15:15:45.15:674,45,0	1/1:0,19:19:51.08:764,51,0	0/0:23,0:23:57.17:0,57,722	1/1:0,33:33:93.29:1352,93,0	1/1:0,29:29:84.28:1258,84,0	1/1:0,7:7:21.07:315,21,0
chr10	9407253	.	T	TAG	25890.02	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=21.266;DP=802;FS=2.338;HRun=0;HaplotypeScore=162.3468;InbreedingCoeff=0.9995;MQ=83.62;MQ0=0;MQRankSum=-9.834;QD=48.94;ReadPosRankSum=4.554;VQSLOD=5.0607;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,150,2219	1/1:1,9:10:27.09:521,27,0	0/0:30,0:30:82.11:0,82,1186	0/0:25,0:25:72.07:0,72,1034	0/0:23,0:23:63.20:0,63,943	0/0:22,0:22:60.19:0,60,898	0/0:22,0:22:60.20:0,60,919	0/0:28,0:28:78.25:0,78,1174	1/1:0,33:35:90.31:1737,90,0	1/1:2,35:38:99:2187,114,0	1/1:0,29:29:72.25:1389,72,0	1/1:1,24:25:66.23:1274,66,0	1/1:5,27:33:78.27:1477,78,0	1/1:2,27:29:75.26:1446,75,0	1/1:1,41:44:99:2084,108,0	0/0:27,0:27:78.25:0,78,1174	1/1:0,22:23:60.21:1159,60,0	0/0:21,0:21:60.20:0,60,918	1/1:7,24:32:93.23:1667,93,0	1/1:3,19:22:51.17:984,51,0	1/1:2,42:44:99:2139,111,0	1/1:3,31:34:93.32:1795,93,0	1/1:2,29:31:72.01:1389,72,0	1/1:1,23:24:54.19:1042,54,0	0/0:24,0:24:69.23:0,69,1057	1/1:2,28:30:87.26:1633,87,0	1/1:2,33:35:78.27:1504,78,0	1/1:0,11:11:24.08:464,24,0
chr10	9407880	.	GAGAA	G	3898.09	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=12.286;DP=876;FS=15.082;HRun=0;HaplotypeScore=147.6120;InbreedingCoeff=0.8913;MQ=74.36;MQ0=0;MQRankSum=-2.165;QD=34.19;ReadPosRankSum=0.570;VQSLOD=3.1625;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:58:99:0,169,4420	0/0:19,0:19:54.18:0,54,1402	0/0:24,0:23:63.19:0,63,1481	0/0:39,0:33:76.81:0,77,1764	0/0:25,0:25:72.25:0,72,1921	0/0:21,0:21:63.22:0,63,1646	0/0:46,0:46:99:0,123,3066	0/0:31,0:31:87.30:0,87,2275	0/0:28,0:28:84.29:0,84,2266	0/0:33,0:33:96.31:0,96,2449	0/0:30,0:30:84.27:0,84,2080	0/0:34,0:34:96.33:0,96,2495	0/0:38,0:38:99:0,105,2651	0/0:30,0:30:84.28:0,84,2169	0/0:39,0:39:99:0,114,2930	0/0:36,0:36:99:0,105,2650	0/0:34,0:34:93.31:0,93,2419	0/0:17,0:17:51.14:0,51,1283	1/1:2,29:31:84.09:1341,84,0	1/1:0,34:34:87.16:1531,87,0	1/1:4,33:37:53.47:1023,53,0	0/0:30,0:30:87.29:0,87,2295	0/0:22,0:22:66.23:0,66,1695	0/0:34,0:34:99:0,99,2602	0/0:23,0:23:66.23:0,66,1764	0/0:41,0:41:99:0,123,3123	0/0:30,0:30:87.30:0,87,2222	0/1:12,0:12:2.42:2,0,719
chr10	9409729	.	GT	G	7476.81	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=16.712;DP=691;FS=2.396;HRun=4;HaplotypeScore=156.4543;InbreedingCoeff=0.9719;MQ=42.92;MQ0=46;MQRankSum=-3.599;QD=25.01;ReadPosRankSum=4.223;VQSLOD=3.2304;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:24:39.09:0,39,523	1/1:1,13:13:36.11:432,36,0	0/0:27,0:9:16.42:0,16,322	0/0:19,0:7:15.05:0,15,207	0/0:39,0:36:96.32:0,96,1343	0/0:27,0:21:54.18:0,54,755	0/0:28,0:25:63.10:0,63,816	0/0:19,0:14:33.06:0,33,421	0/0:26,0:19:33.07:0,33,439	1/1:4,34:35:99:1185,99,0	1/1:1,19:19:51.16:611,51,0	1/1:4,18:18:33.10:395,33,0	1/1:3,18:19:30.09:360,30,0	1/1:2,19:20:39.12:467,39,0	1/1:2,23:23:48.15:575,48,0	0/0:32,0:27:74.97:0,75,897	1/1:2,19:18:45.14:540,45,0	0/0:23,0:16:36.06:0,36,463	0/0:26,0:17:51.17:0,51,711	0/0:33,0:32:93.31:0,93,1291	0/0:24,0:22:54.18:0,54,756	1/1:4,27:28:63.19:756,63,0	1/1:2,25:26:48.14:575,48,0	1/1:2,9:10:24.07:288,24,0	0/0:38,0:37:99:0,105,1337	1/1:1,17:17:45.14:540,45,0	1/1:1,28:27:60.06:719,60,0	1/1:0,1:1:3.01:36,3,0
chr10	9409856	.	G	GGTGTGTGTGT	14125.29	PASS	AB=0.765;AC=39;AF=0.696;AN=56;BaseQRankSum=-2.798;DP=783;FS=23.393;HRun=0;HaplotypeScore=307.4432;InbreedingCoeff=0.7640;MQ=48.40;MQ0=2;MQRankSum=-7.335;QD=25.73;ReadPosRankSum=-2.160;VQSLOD=2.6148;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:38,0:43:28.47:449,28,0	1/1:7,8:19:18.49:655,18,0	0/0:29,0:13:17.71:0,18,352	0/0:31,0:22:24.07:0,24,586	1/1:13,0:21:14.94:406,15,0	1/1:13,0:22:33:779,33,0	1/1:22,0:25:18.84:412,19,0	1/1:30,0:32:35.71:733,36,0	1/1:15,0:35:37.28:449,37,0	0/0:42,0:43:74.92:0,75,2000	0/0:25,0:26:21.04:0,21,507	1/1:14,13:30:30.06:1197,30,0	1/1:20,13:34:30.10:1270,30,0	1/1:13,13:33:23.82:943,24,0	0/0:44,0:45:69.22:0,69,1988	1/1:16,0:29:48.14:1167,48,0	1/1:19,7:29:24.08:1074,24,0	1/1:7,0:8:9.03:180,9,0	0/1:14,0:16:15.31:41,0,15	0/1:13,0:32:0.57:107,0,1	1/1:11,0:13:11.58:108,12,0	1/1:14,15:32:11.80:504,12,0	0/0:25,0:25:33.05:0,33,866	0/0:34,0:34:48.07:0,48,1209	0/1:20,0:28:10.56:411,0,11	1/1:19,5:26:30.10:985,30,0	1/1:14,6:23:36.12:1594,36,0	1/1:14,2:15:23.24:661,23,0
chr10	9409887	.	A	ATG	9540.09	PASS	AB=0.668;AC=29;AF=0.518;AN=56;BaseQRankSum=-5.857;DP=763;FS=30.628;HRun=0;HaplotypeScore=253.5971;InbreedingCoeff=0.6486;MQ=45.75;MQ0=15;MQRankSum=1.889;QD=20.97;ReadPosRankSum=0.725;VQSLOD=3.8391;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:16,23:40:22.76:281,23,0	0/0:14,0:14:16.99:0,17,218	0/0:48,0:18:30.40:0,30,353	0/0:40,0:14:20.28:0,20,234	0/1:8,13:20:22.77:184,0,23	1/1:2,17:19:30.07:494,30,0	1/1:12,21:33:38.38:598,38,0	1/1:11,25:37:40.38:1160,40,0	0/0:28,0:28:42.10:0,42,530	1/1:16,30:44:73.46:1656,73,0	0/1:4,21:25:13.89:290,0,14	0/0:27,0:28:42.08:0,42,522	0/0:26,0:26:43.86:0,44,598	0/0:36,0:36:50.83:0,51,677	1/1:10,34:42:66.22:1091,66,0	1/1:6,25:32:45:746,45,0	0/0:23,0:24:3.13:0,3,281	1/1:6,8:15:26.09:528,26,0	0/1:7,10:13:4.63:460,0,5	1/1:7,16:24:17.89:298,18,0	1/1:3,14:17:27.09:449,27,0	0/0:30,0:30:27.09:0,27,340	1/1:6,18:24:24.05:398,24,0	1/1:8,23:31:15.99:810,16,0	0/1:4,18:22:28.87:91,0,29	0/0:14,0:14:38.61:0,39,463	0/0:19,0:18:35.76:0,36,453	0/1:6,0:5:5.85:6,0,65
chr10	9409897	.	G	GAC	244.21	PASS	AB=0.976;AC=15;AF=0.268;AN=56;BaseQRankSum=7.325;DP=792;FS=4.677;HRun=0;HaplotypeScore=291.9566;InbreedingCoeff=-0.2614;MQ=48.13;MQ0=11;MQRankSum=-7.857;QD=0.60;ReadPosRankSum=2.434;VQSLOD=2.1775;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:45,0:44:1.76:2,0,211	0/1:10,1:11:6.37:6,0,238	0/0:40,0:19:41.88:0,42,570	0/0:34,0:11:22.81:0,23,340	0/1:23,0:22:14.87:15,0,82	0/1:20,0:20:2.31:63,0,2	0/1:34,1:35:15.63:16,0,128	0/0:39,0:39:37.79:0,38,484	0/0:30,0:30:54.15:0,54,867	0/1:51,0:49:6.22:6,0,459	0/1:27,0:27:18.01:18,0,125	0/0:30,1:31:60.11:0,60,895	0/0:29,1:30:17.04:0,17,822	0/0:38,0:38:43.97:0,44,1119	0/1:46,0:43:0.30:0,0,294	0/1:36,0:36:48.87:49,0,210	0/0:24,1:25:11.59:0,12,487	0/1:15,0:15:18.76:39,0,19	0/1:16,0:14:1.35:1,0,144	0/1:24,0:24:48.47:48,0,64	0/0:18,0:18:2.96:0,3,105	0/0:23,1:24:27.09:0,27,440	0/1:26,0:26:42.50:42,0,115	0/0:33,0:33:7.25:0,7,177	0/1:23,0:23:4.54:5,0,87	0/0:22,0:22:63.18:0,63,949	0/0:24,0:23:10.53:0,11,705	0/1:4,2:5:74.23:74,0,117
chr10	9410058	.	CAT	C	2959.89	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=11.020;DP=938;FS=1.979;HRun=0;HaplotypeScore=175.9436;InbreedingCoeff=0.8396;MQ=61.22;MQ0=7;MQRankSum=2.131;QD=18.27;ReadPosRankSum=1.523;VQSLOD=3.8213;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:38.62:0,39,624	0/0:10,0:10:27.09:0,27,466	0/0:32,0:13:20.26:0,20,273	0/1:47,0:18:14.22:14,0,152	0/0:29,0:29:72.25:0,72,1249	0/0:29,0:29:54.18:0,54,937	0/0:25,0:25:60.64:0,61,995	0/0:54,0:54:99:0,129,2074	0/0:48,0:48:99:0,102,1617	0/0:36,0:36:99:0,99,1649	0/0:27,0:27:60.21:0,60,1041	0/0:43,0:43:87.19:0,87,1439	0/0:46,0:46:99:0,102,1665	0/0:51,0:51:99:0,108,1791	0/0:36,0:36:63.22:0,63,1100	0/0:48,0:48:99:0,108,1744	0/0:27,0:28:64.35:0,64,1040	0/0:20,0:20:48.10:0,48,771	1/1:1,10:10:27.07:335,27,0	1/1:1,18:18:42.14:568,42,0	1/1:7,78:84:99:2190,163,0	0/0:15,0:15:30.09:0,30,498	0/0:22,0:22:33.10:0,33,550	0/0:38,0:38:75.21:0,75,1247	0/0:42,0:42:81.16:0,81,1299	0/0:31,0:31:84.22:0,84,1413	0/0:25,0:25:63.14:0,63,992	0/0:10,0:10:30.10:0,30,525
chr10	9410178	.	TATGTAC	T	3408.97	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=10.720;DP=806;FS=11.566;HRun=0;HaplotypeScore=243.9033;InbreedingCoeff=0.8258;MQ=58.07;MQ0=1;MQRankSum=-7.285;QD=24.70;ReadPosRankSum=0.182;VQSLOD=2.0421;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:44.94:0,45,1440	0/0:18,0:18:27.09:0,27,959	0/0:22,0:7:5.48:0,5,46	0/0:23,0:13:1.13:0,1,142	0/0:37,0:37:72.25:0,72,2369	0/0:29,0:29:81.23:0,81,2503	0/0:16,0:16:42.11:0,42,1306	0/0:53,0:53:99:0,144,4571	0/0:32,0:32:87.30:0,87,2951	1/1:2,40:42:99:2332,111,0	1/1:1,21:22:2.78:72,3,0	0/0:32,0:32:93.32:0,93,3161	0/0:45,0:45:99:0,132,4496	0/0:44,0:44:99:0,126,4251	1/1:0,35:35:26.52:647,27,0	0/0:47,0:47:99:0,138,4723	0/0:14,0:14:33.09:0,33,1007	0/0:14,0:14:38.92:0,39,1132	0/0:11,0:11:30.10:0,30,1014	0/0:32,0:32:69.17:0,69,2254	0/0:31,0:31:93.32:0,93,3236	0/0:23,0:23:33.01:0,33,1175	1/1:0,18:18:11.47:287,11,0	1/1:1,20:21:2.90:72,3,0	0/0:30,0:30:63.19:0,63,1980	0/0:39,1:40:42.44:0,42,3626	0/0:32,0:32:96.33:0,96,3357	0/0:10,0:10:21.03:0,21,587
chr10	9410262	.	C	CATAT	6205.64	PASS	AB=1.000;AC=26;AF=0.481;AN=54;BaseQRankSum=2.838;DP=555;FS=0.000;HRun=0;HaplotypeScore=149.3994;InbreedingCoeff=0.4787;MQ=57.35;MQ0=6;MQRankSum=0.393;QD=16.96;ReadPosRankSum=-1.117;VQSLOD=4.0771;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:17,2:19:27.02:367,27,0	0/0:6,0:6:7.71:0,8,118	0/0:20,0:5:3.01:0,3,43	0/1:35,0:7:10.34:20,0,10	1/1:21,2:23:54.17:846,54,0	1/1:25,1:26:54.18:957,54,0	1/1:8,1:9:18.06:307,18,0	1/1:38,12:48:86.91:1178,87,0	0/1:20,0:20:24.19:24,0,177	0/0:28,0:28:72.21:0,72,1144	0/0:25,0:25:53.77:0,54,894	0/0:14,0:14:10.69:0,11,179	0/1:29,0:29:51.35:51,0,271	0/1:18,0:18:16.01:16,0,171	0/0:24,0:24:44.86:0,45,730	1/1:19,1:20:28.77:516,29,0	0/0:12,0:12:17.14:0,17,199	1/1:14,2:16:33.08:535,33,0	1/1:17,0:17:16.24:188,16,0	1/1:10,0:10:3.01:34,3,0	./.	0/1:8,0:8:19.54:20,0,40	0/0:12,0:12:26.68:0,27,319	0/0:7,0:7:5.76:0,6,105	1/1:30,0:30:65.94:1058,66,0	0/1:34,0:34:86.35:86,0,313	0/0:20,0:20:26:0,26,380	0/0:17,0:16:34.72:0,35,284
chr10	9410275	.	GTATA	G	2655.02	PASS	AB=0.899;AC=18;AF=0.346;AN=52;BaseQRankSum=6.948;DP=480;FS=4.742;HRun=0;HaplotypeScore=149.8258;InbreedingCoeff=0.7691;MQ=57.48;MQ0=4;MQRankSum=2.209;QD=13.62;ReadPosRankSum=1.445;VQSLOD=3.3966;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,1:16:13.63:147,14,0	0/0:9,0:9:20.76:0,21,265	0/0:13,0:5:8.99:0,9,133	./.	1/1:22,2:24:30.21:334,30,0	1/1:22,2:24:44.61:358,45,0	1/1:11,0:11:16.87:264,17,0	1/1:31,9:40:43.56:656,44,0	0/0:17,0:17:35.70:0,36,538	0/0:25,0:26:50.96:0,51,1215	0/0:26,0:27:69:0,69,1609	0/0:13,0:13:29.27:0,29,418	0/0:20,0:20:41.60:0,42,631	0/0:14,0:14:31.30:0,31,426	0/0:19,0:19:48.15:0,48,1161	1/1:14,3:18:28.21:250,28,0	0/0:10,0:10:27.05:0,27,430	1/1:12,1:13:26.70:261,27,0	0/1:11,1:12:18.50:39,0,19	0/0:8,1:9:7.78:0,8,38	./.	0/1:6,0:7:24.11:24,0,98	0/0:10,0:10:24.08:0,24,580	0/0:6,0:6:9.03:0,9,229	1/1:28,2:30:35.35:520,35,0	0/0:33,0:34:3.07:0,3,639	0/0:17,0:17:47.65:0,48,776	0/0:13,0:13:36.09:0,36,562
chr10	9410279	.	A	ATATGTG	4043.66	PASS	AB=0.984;AC=23;AF=0.411;AN=56;BaseQRankSum=8.710;DP=488;FS=0.817;HRun=0;HaplotypeScore=163.4111;InbreedingCoeff=0.8515;MQ=60.33;MQ0=2;MQRankSum=-2.220;QD=16.71;ReadPosRankSum=0.379;VQSLOD=2.8080;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:15:21.12:148,21,0	0/0:9,0:9:20.77:0,21,365	0/1:13,0:7:3.13:3,0,133	0/1:18,0:5:0:0,0,0	1/1:24,0:24:46.92:445,47,0	1/1:23,0:23:51.49:426,51,0	1/1:11,0:11:11.65:239,12,0	1/1:42,0:42:51.36:630,51,0	0/0:18,0:18:45.94:0,46,804	0/0:22,0:22:57.18:0,57,1190	0/0:29,0:29:71.98:0,72,1570	0/0:13,0:13:34.24:0,34,610	0/0:20,0:20:47.89:0,48,887	0/0:14,0:14:33.09:0,33,647	0/0:20,0:20:48.16:0,48,1103	1/1:17,0:17:25.24:327,25,0	0/0:11,0:11:33.08:0,33,626	1/1:13,0:13:31.35:289,31,0	1/1:7,8:17:38.03:792,38,0	1/1:3,5:13:2.96:106,3,0	0/1:3,0:3:0:0,0,0	0/0:6,0:6:8.62:0,9,172	0/0:11,0:11:30.08:0,30,594	0/0:6,0:6:8.95:0,9,212	1/1:31,0:31:63.48:638,63,0	0/0:33,0:33:78.10:0,78,1229	0/0:21,0:21:51.11:0,51,1025	0/0:13,0:13:39.11:0,39,820
chr10	9411677	.	G	GT	3562.83	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-11.470;DP=740;FS=0.443;HRun=0;HaplotypeScore=68.1420;InbreedingCoeff=0.9936;MQ=79.39;MQ0=0;MQRankSum=-0.625;QD=42.41;ReadPosRankSum=-0.750;VQSLOD=3.8278;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,151,2089	0/0:9,0:9:24.07:0,24,321	0/0:28,0:28:78.23:0,78,1014	0/0:19,0:19:56.97:0,57,747	0/0:22,0:22:66.19:0,66,885	0/0:20,0:20:60.20:0,60,827	0/0:35,0:35:99:0,102,1419	0/0:35,0:35:99:0,102,1414	0/0:30,0:30:90.30:0,90,1255	0/0:25,0:25:75.24:0,75,1026	0/0:15,0:15:42.14:0,42,577	0/0:22,0:22:66.21:0,66,903	0/0:24,0:24:69.14:0,69,932	0/0:30,0:30:90.30:0,90,1255	0/0:41,0:41:99:0,117,1567	0/0:31,0:31:93.31:0,93,1294	0/0:30,0:30:90.30:0,90,1254	0/0:21,0:21:63.21:0,63,871	1/1:1,18:19:54.17:839,54,0	1/1:1,24:25:66.23:1055,66,0	1/1:1,38:40:99:1669,105,0	0/0:25,0:25:75.24:0,75,1024	0/0:26,0:26:75.25:0,75,1042	0/0:34,0:34:99:0,99,1376	0/0:22,0:22:66.21:0,66,895	0/0:36,0:36:99:0,102,1405	0/0:21,0:21:60.20:0,60,834	0/0:5,0:5:15.05:0,15,200
chr10	9412286	.	T	TG	2211.45	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-9.982;DP=706;FS=2.310;HRun=5;HaplotypeScore=67.9996;InbreedingCoeff=0.9985;MQ=96.21;MQ0=0;MQRankSum=-3.544;QD=31.15;ReadPosRankSum=-1.119;VQSLOD=3.8788;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,138,1464	0/0:9,0:9:24.06:0,24,258	0/0:28,0:28:81.12:0,81,843	0/0:39,0:39:99:0,102,1070	0/0:22,0:22:57.12:0,57,604	0/0:29,0:28:81.66:0,82,863	0/0:23,0:23:57.12:0,57,603	0/0:37,0:37:87.21:0,87,935	0/0:26,0:26:63.13:0,63,668	0/0:22,0:22:45.08:0,45,474	0/0:11,0:11:30.06:0,30,311	0/0:20,0:20:51.13:0,51,548	0/0:21,0:21:60.12:0,60,629	0/0:25,0:25:69.17:0,69,741	0/0:20,0:20:57.14:0,57,612	0/0:30,0:30:81.20:0,81,870	0/0:31,0:31:90.22:0,90,967	0/0:22,0:22:63.14:0,63,667	1/1:4,16:20:48.15:618,48,0	1/1:0,17:17:51.17:671,51,0	1/1:4,30:34:81.26:1066,81,0	0/0:22,0:22:54.13:0,54,579	0/0:12,0:12:27.07:0,27,290	0/0:35,0:35:99:0,99,1039	0/0:31,0:31:84.21:0,84,902	0/0:27,0:27:69.17:0,69,742	0/0:27,0:27:78.20:0,78,838	0/0:12,0:12:30.08:0,30,322
chr10	9414331	.	TTTGCAGTCCTCATAGACAC	T	3604.87	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.535;DP=600;FS=34.348;HRun=0;HaplotypeScore=295.1328;InbreedingCoeff=0.9979;MQ=84.67;MQ0=0;MQRankSum=-7.337;QD=120.16;ReadPosRankSum=-0.755;VQSLOD=1.9614;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,132,11909	0/0:9,0:9:27.09:0,27,2120	0/0:24,0:24:72.19:0,72,4027	0/0:25,0:25:69.24:0,69,4441	0/0:21,0:21:63.22:0,63,4857	0/0:21,0:21:63.17:0,63,4904	0/0:27,0:26:78.22:0,78,5994	0/0:27,0:27:75.26:0,75,5158	0/0:21,0:21:63.15:0,63,4924	0/0:25,0:25:75.26:0,75,6314	0/0:16,0:16:48.13:0,48,4181	0/0:21,0:21:60.21:0,60,5122	0/0:18,0:18:51.14:0,51,4325	0/0:25,0:25:75.26:0,75,6935	0/0:24,0:24:69.24:0,69,5944	0/0:25,0:25:75.26:0,75,6513	0/0:15,0:15:39.13:0,39,3381	0/0:19,0:19:57.15:0,57,4807	1/1:0,8:8:24.08:1096,24,0	1/1:0,11:11:33.11:1481,33,0	1/1:1,10:11:24.08:1027,24,0	0/0:30,0:30:90.27:0,90,7858	0/0:21,0:21:63.22:0,63,5171	0/0:41,0:41:99:0,114,8980	0/0:15,0:15:45.15:0,45,3435	0/0:22,0:22:66.23:0,66,6000	0/0:23,0:23:69.20:0,69,5343	0/0:10,0:10:30.10:0,30,2672
chr10	9414577	.	G	GT	8384.42	PASS	AB=0.561;AC=19;AF=0.339;AN=56;BaseQRankSum=-13.749;DP=700;FS=1.329;HRun=4;HaplotypeScore=68.1410;InbreedingCoeff=0.9370;MQ=80.84;MQ0=0;MQRankSum=-1.206;QD=34.22;ReadPosRankSum=3.875;VQSLOD=5.4394;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,132,1455	1/1:1,12:13:23.94:282,24,0	0/0:20,0:20:35.78:0,36,572	0/0:18,0:18:48.10:0,48,530	0/0:26,0:25:63.17:0,63,706	0/0:28,0:28:84.22:0,84,942	0/0:23,0:23:66.14:0,66,717	0/0:36,0:36:96.23:0,96,1051	1/1:0,24:24:69.23:943,69,0	0/0:28,0:28:84.20:0,84,933	0/0:8,0:8:21.06:0,21,238	1/1:3,29:32:84.28:1149,84,0	1/1:2,37:39:99:1353,99,0	1/1:2,24:26:66.22:902,66,0	0/0:29,0:29:81.20:0,81,899	0/0:31,1:32:46.20:0,46,902	1/1:0,23:23:60.20:821,60,0	0/0:19,0:19:57.16:0,57,646	0/0:23,0:23:66.15:0,66,721	0/0:22,0:22:60.11:0,60,652	0/0:29,0:29:87.22:0,87,967	1/1:2,31:33:84.24:1124,84,0	0/0:18,0:18:48.12:0,48,534	0/0:29,0:29:81.15:0,81,891	0/0:22,0:22:54.14:0,54,602	0/1:5,18:23:4.84:704,0,5	1/1:4,23:27:66.22:903,66,0	1/1:0,5:5:15.05:205,15,0
chr10	9414670	.	AG	A	3045.19	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=10.915;DP=807;FS=3.258;HRun=1;HaplotypeScore=82.1417;InbreedingCoeff=0.9999;MQ=87.03;MQ0=0;MQRankSum=-3.452;QD=38.06;ReadPosRankSum=-1.019;VQSLOD=3.6984;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,114,1768	0/0:18,0:18:45.15:0,45,718	0/0:27,0:27:78.20:0,78,1140	0/0:26,0:27:78.24:0,78,1199	0/0:31,0:31:93.29:0,93,1440	0/0:30,0:30:87.30:0,87,1388	0/0:26,0:26:78.27:0,78,1241	0/0:31,0:31:90.28:0,90,1374	0/0:27,0:27:81.25:0,81,1248	0/0:29,0:29:80.47:0,80,1209	0/0:21,0:21:63.20:0,63,981	0/0:26,0:26:75.24:0,75,1175	0/0:42,0:42:99:0,126,1963	0/0:27,0:27:75.26:0,75,1196	0/0:43,0:43:99:0,129,2060	0/0:40,0:39:99:0,120,1918	0/0:31,0:31:90.28:0,90,1395	0/0:30,0:30:90.31:0,90,1439	1/1:2,22:24:69.21:923,69,0	1/1:0,19:19:54.18:754,54,0	1/1:0,37:37:99:1511,108,0	0/0:41,0:41:99:0,117,1871	0/0:28,0:28:84.27:0,84,1320	0/0:20,0:20:57.19:0,57,911	0/0:20,0:20:60.20:0,60,958	0/0:30,0:30:90.31:0,90,1439	0/0:33,0:33:99:0,99,1582	0/0:11,0:11:33.11:0,33,528
chr10	9418321	.	G	GTTT	16316.20	PASS	AB=0.943;AC=27;AF=0.482;AN=56;BaseQRankSum=1.300;DP=656;FS=0.966;HRun=7;HaplotypeScore=93.3566;InbreedingCoeff=0.9249;MQ=78.66;MQ0=0;MQRankSum=-4.811;QD=44.95;ReadPosRankSum=-1.688;VQSLOD=4.5165;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,26:31:75.26:1537,75,0	0/0:15,0:15:39.11:0,39,515	0/0:23,0:23:38.68:0,39,496	0/0:11,0:10:24.07:0,24,327	1/1:4,28:35:93.30:1827,93,0	1/1:2,21:24:63.22:1287,63,0	1/1:4,18:22:57.20:1166,57,0	1/1:9,22:31:72.23:1450,72,0	0/0:20,0:20:60.16:0,60,782	1/1:7,31:40:99:2103,108,0	1/1:3,18:22:57.11:1047,57,0	0/0:21,0:21:60.19:0,60,818	0/0:24,0:24:66.20:0,66,884	0/0:26,0:26:78.25:0,78,1048	1/1:4,23:29:69.22:1392,69,0	1/1:2,16:19:51.17:1039,51,0	0/0:18,0:18:51.17:0,51,696	1/1:4,12:20:45.11:836,45,0	0/0:30,0:30:84.27:0,84,1146	0/0:39,0:39:99:0,114,1536	0/0:6,0:6:18.06:0,18,246	0/0:25,0:25:72.22:0,72,965	1/1:5,18:23:48.16:972,48,0	1/1:1,5:6:14.79:287,15,0	1/1:1,26:27:69.17:1349,69,0	0/1:31,2:33:25.17:25,0,1170	0/0:25,0:24:72.24:0,72,983	0/0:10,0:10:27.09:0,27,369
chr10	9418609	.	AG	A	18892.10	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-4.300;DP=674;FS=7.077;HRun=5;HaplotypeScore=84.7595;InbreedingCoeff=0.9932;MQ=85.51;MQ0=0;MQRankSum=-10.695;QD=30.04;ReadPosRankSum=6.725;VQSLOD=4.6480;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,32:36:87.24:987,87,0	1/1:1,6:7:18.05:204,18,0	0/0:23,0:23:66.16:0,66,844	0/0:22,0:22:56.78:0,57,724	1/1:3,27:30:72.17:803,72,0	1/1:2,27:29:72.20:817,72,0	1/1:5,24:29:63.18:715,63,0	1/1:2,33:35:93.26:1055,93,0	1/1:1,17:18:48.14:544,48,0	1/1:2,25:27:75.20:840,75,0	1/1:1,19:20:57.16:646,57,0	1/1:0,29:29:87.25:986,87,0	1/1:0,31:31:90.26:1021,90,0	1/1:1,18:19:51.14:578,51,0	1/1:3,36:39:99:1157,102,0	1/1:2,18:20:51.15:579,51,0	1/1:2,23:25:66.19:749,66,0	1/1:0,17:17:42.12:476,42,0	1/1:2,16:18:48.14:544,48,0	1/1:0,20:20:60.17:680,60,0	1/1:0,10:10:21.06:238,21,0	1/1:2,25:27:69.20:782,69,0	1/1:1,23:24:66.12:732,66,0	1/1:0,31:31:90.26:1021,90,0	1/1:0,22:22:63.18:714,63,0	1/1:1,36:37:99:1140,102,0	1/1:0,19:19:51.15:578,51,0	1/1:0,10:10:27.08:306,27,0
chr10	9418918	.	AT	A	509.44	PASS	AB=1.000;AC=12;AF=0.231;AN=52;BaseQRankSum=-1.083;DP=182;FS=0.000;HRun=1;HaplotypeScore=33.1852;InbreedingCoeff=0.7259;MQ=71.44;MQ0=0;MQRankSum=-0.940;QD=12.43;ReadPosRankSum=0.900;VQSLOD=1.8795;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:29.93:0,30,271	./.	0/0:4,0:4:11.99:0,12,103	0/0:8,0:8:23.98:0,24,201	0/0:8,0:8:6:0,6,58	0/1:2,0:2:0:0,0,0	0/0:9,0:9:14.99:0,15,143	0/1:5,0:5:0:0,0,0	0/0:8,0:8:15.03:0,15,155	1/1:0,3:3:9.03:125,9,0	1/1:0,4:4:9.03:124,9,0	0/0:9,0:9:20.98:0,21,272	0/0:5,0:5:12.04:0,12,183	0/0:8,0:8:21.06:0,21,305	1/1:1,7:8:10.69:161,11,0	0/0:9,0:9:12:0,12,114	0/0:8,0:8:21.03:0,21,263	0/0:2,0:2:6.01:0,6,58	0/0:0,0:5:11.19:0,11,51	0/0:0,0:1:2.80:0,3,13	0/0:1,0:19:25.13:0,25,115	0/0:5,0:5:11.86:0,12,133	1/1:0,6:6:9.03:123,9,0	1/1:0,13:13:9.03:124,9,0	0/0:1,0:1:3:0,3,26	0/0:6,0:6:18.05:0,18,248	0/0:10,0:10:30.03:0,30,407	./.
chr10	9419161	.	AG	A	1768.36	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-1.961;DP=323;FS=19.765;HRun=8;HaplotypeScore=58.8979;InbreedingCoeff=0.8618;MQ=91.84;MQ0=2;MQRankSum=-1.427;QD=21.57;ReadPosRankSum=0.662;VQSLOD=2.1558;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,10:12:29.07:266,29,0	0/0:4,0:4:12.04:0,12,145	0/0:59,0:35:4.57:0,5,523	0/0:51,0:30:20.91:0,21,476	1/1:1,3:4:9.01:87,9,0	1/1:3,10:13:27.04:261,27,0	1/1:0,9:9:24.04:232,24,0	1/1:1,14:15:42.07:405,42,0	1/1:2,9:11:26.26:237,26,0	0/0:6,0:6:15.05:0,15,181	0/0:9,0:9:18.05:0,18,216	0/0:16,0:16:45.08:0,45,515	0/0:5,0:5:15.03:0,15,168	0/0:10,0:10:30.05:0,30,346	0/0:8,0:8:24.06:0,24,279	1/1:0,10:10:30.05:290,30,0	0/0:8,0:8:24.07:0,24,290	1/1:0,2:2:6.01:58,6,0	0/0:6,0:6:15.05:0,15,180	0/0:5,0:5:2.92:0,3,68	0/0:19,0:19:39.12:0,39,471	0/0:6,0:6:11.02:0,11,143	0/0:6,0:6:18.05:0,18,208	0/0:8,0:8:21.06:0,21,253	1/1:1,5:6:6.94:134,7,0	0/0:8,0:8:21.06:0,21,254	0/0:6,0:6:18.05:0,18,216	0/0:1,0:1:3.01:0,3,36
chr10	9419654	.	C	CT	2707.34	PASS	AB=0.990;AC=42;AF=0.750;AN=56;BaseQRankSum=6.152;DP=575;FS=2.496;HRun=10;HaplotypeScore=157.7234;InbreedingCoeff=0.4846;MQ=66.93;MQ0=9;MQRankSum=-7.070;QD=5.76;ReadPosRankSum=-2.471;VQSLOD=0.2127;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:30:18.40:155,18,0	1/1:5,4:9:19.66:135,20,0	0/1:36,0:19:17.04:17,0,58	0/1:37,0:18:28.68:29,0,48	1/1:33,0:33:21:67,21,0	1/1:16,0:14:10.64:67,11,0	1/1:21,0:21:19.23:82,19,0	0/1:22,0:23:7.28:31,0,7	0/1:12,0:12:1.18:3,0,1	0/0:35,0:34:50.90:0,51,394	0/0:20,0:20:2.97:0,3,200	1/1:22,1:23:24.21:152,24,0	1/1:19,1:20:27.67:195,28,0	1/1:15,1:16:32.25:228,32,0	0/0:22,0:23:14.59:0,15,104	1/1:19,0:23:38.20:194,38,0	1/1:13,5:17:32.09:237,32,0	1/1:5,1:6:12.03:125,12,0	1/1:16,0:15:25.08:121,25,0	1/1:23,0:22:41.19:182,41,0	1/1:7,0:7:0.59:10,1,0	1/1:13,2:15:24.77:129,25,0	0/0:21,0:21:0.26:0,0,159	0/0:6,0:6:2.77:0,3,21	1/1:22,0:23:7.53:53,8,0	1/1:19,8:26:31.35:341,31,0	1/1:20,1:20:28.74:199,29,0	1/1:5,6:11:14.86:116,15,0
chr10	9419660	.	TTTTTG	T	1941.11	PASS	AB=0.983;AC=17;AF=0.304;AN=56;BaseQRankSum=-6.003;DP=598;FS=8.107;HRun=0;HaplotypeScore=170.6791;InbreedingCoeff=-0.2440;MQ=58.11;MQ0=11;MQRankSum=-1.190;QD=5.08;ReadPosRankSum=-0.286;VQSLOD=1.5514;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:30,1:31:99:176,0,229	0/0:8,0:8:20.78:0,21,239	0/1:38,0:18:2.74:3,0,139	0/1:40,0:13:18.96:19,0,51	0/1:35,0:34:99:228,0,258	0/1:19,0:16:96.01:96,0,210	0/1:23,1:24:99:222,0,217	0/1:20,4:24:99:347,0,213	1/1:12,0:12:29.04:168,29,0	0/0:35,0:34:59.94:0,60,873	0/0:20,0:20:52.11:0,52,774	0/0:22,0:22:29.59:0,30,365	0/0:19,0:19:4.95:0,5,347	0/0:17,0:17:5.16:0,5,328	0/0:25,0:25:20.25:0,20,276	0/1:27,1:28:99:226,0,299	0/0:19,0:18:8.57:0,9,226	0/1:8,0:7:5.51:44,0,6	0/1:21,0:20:99:112,0,275	0/1:22,0:21:99:264,0,383	0/1:6,0:6:6.37:6,0,21	0/0:14,0:13:11.28:0,11,286	0/0:21,0:21:36.86:0,37,516	0/0:8,0:8:3.48:0,3,61	0/1:28,0:28:99:171,0,105	0/1:26,0:25:12.62:13,0,517	0/1:20,0:19:3.43:3,0,177	0/0:8,0:8:14.97:0,15,150
chr10	9419661	.	TTTTG	T	2283.22	PASS	AB=0.970;AC=18;AF=0.321;AN=56;BaseQRankSum=-6.164;DP=597;FS=8.836;HRun=0;HaplotypeScore=160.8980;InbreedingCoeff=-0.2996;MQ=57.83;MQ0=11;MQRankSum=0.214;QD=6.12;ReadPosRankSum=-1.069;VQSLOD=1.9770;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:27,3:30:99:275,0,161	0/0:8,0:8:20.68:0,21,167	0/1:38,0:18:14.57:15,0,130	0/0:41,0:13:1.05:0,1,68	0/1:31,5:35:99:358,0,175	0/1:16,2:15:99:165,0,154	0/1:22,2:24:99:303,0,126	0/1:26,0:25:99:259,0,156	1/1:12,0:12:33.06:206,33,0	0/0:33,0:32:46.58:0,47,744	0/0:20,0:20:49.71:0,50,626	0/0:21,0:21:28.78:0,29,248	0/0:19,0:19:16.79:0,17,263	0/0:18,0:18:3.20:0,3,215	0/0:25,0:25:20.50:0,20,234	0/1:27,0:27:99:191,0,263	0/1:19,0:18:7.05:7,0,130	0/1:8,0:7:8.68:31,0,9	0/1:21,0:19:96.04:96,0,222	0/1:23,0:22:99:235,0,281	0/1:7,0:7:2.07:2,0,21	0/1:12,0:11:4.01:4,0,196	0/0:23,0:23:8.01:0,8,382	0/0:8,0:8:3.48:0,3,47	0/1:25,3:28:68.31:267,0,68	0/1:25,0:24:21.97:22,0,363	0/1:19,0:18:3.51:4,0,122	0/0:8,0:8:14.82:0,15,112
chr10	9419664	.	T	TTG	5087.70	PASS	AB=0.975;AC=27;AF=0.482;AN=56;BaseQRankSum=-2.157;DP=592;FS=1.239;HRun=0;HaplotypeScore=140.3573;InbreedingCoeff=0.5627;MQ=55.79;MQ0=12;MQRankSum=-3.430;QD=17.54;ReadPosRankSum=3.453;VQSLOD=5.2408;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:31,0:31:11.68:12,0,163	1/1:6,2:8:21.06:318,21,0	0/0:41,0:18:24.66:0,25,212	0/0:39,0:11:3.50:0,4,118	0/0:34,0:35:29.28:0,29,219	0/0:18,0:15:19.37:0,19,128	0/0:23,0:23:2.01:0,2,166	0/1:23,0:24:77.60:78,0,145	0/0:12,0:12:33.64:0,34,177	0/0:30,0:29:63.90:0,64,588	0/0:21,0:21:36.71:0,37,397	1/1:16,5:21:35.69:428,36,0	1/1:14,5:20:29.48:412,29,0	1/1:13,4:18:38.98:542,39,0	0/0:24,0:24:10.04:0,10,141	0/1:24,0:25:76.47:138,0,76	1/1:15,4:18:32.87:485,33,0	0/1:7,0:6:20.73:29,0,21	0/1:18,0:19:11.06:279,0,11	1/1:17,0:23:21.74:432,22,0	1/1:6,0:7:11.60:101,12,0	1/1:8,4:11:32.88:365,33,0	0/0:22,0:22:34.44:0,34,321	0/0:8,0:8:2.68:0,3,29	0/0:26,0:28:25.22:0,25,163	1/1:22,3:24:33.89:773,34,0	1/1:3,12:17:33.02:430,33,0	1/1:6,2:8:15.05:266,15,0
chr10	9419665	.	G	GGT	5365.70	PASS	AB=0.797;AC=31;AF=0.554;AN=56;BaseQRankSum=-5.777;DP=603;FS=9.345;HRun=0;HaplotypeScore=141.9472;InbreedingCoeff=0.3305;MQ=54.60;MQ0=14;MQRankSum=1.706;QD=13.35;ReadPosRankSum=5.148;VQSLOD=4.0729;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:39.57:0,40,313	1/1:3,6:9:21.07:339,21,0	0/1:42,0:17:14.96:15,0,75	0/1:39,0:11:6.35:6,0,78	0/0:36,0:35:50.55:0,51,364	0/0:18,0:15:32.86:0,33,230	0/0:23,0:23:49.47:0,49,299	0/0:27,0:26:65.44:0,65,441	0/0:12,0:12:34.53:0,35,191	0/1:7,0:28:83.18:232,0,83	0/1:6,1:22:44.55:209,0,45	1/1:5,9:21:36.10:576,36,0	1/1:8,9:21:30.98:403,31,0	1/1:6,9:18:38.95:538,39,0	0/1:3,0:24:51.87:67,0,52	0/0:25,0:25:36.85:0,37,276	1/1:6,15:21:34.85:503,35,0	0/1:7,0:6:15.95:16,0,26	0/1:22,0:20:35.86:36,0,57	0/1:24,1:23:19.13:234,0,19	1/1:7,0:7:3.27:30,3,0	1/1:4,7:11:33.10:534,33,0	0/1:3,0:23:68.70:75,0,69	1/1:2,1:9:5.95:42,6,0	0/0:28,0:28:33.94:0,34,245	1/1:4,17:22:59.69:909,60,0	1/1:15,3:17:32.95:404,33,0	1/1:2,6:8:13.86:196,14,0
chr10	9419676	.	G	GT	1028.76	PASS	AB=0.962;AC=22;AF=0.393;AN=56;BaseQRankSum=4.397;DP=588;FS=19.566;HRun=10;HaplotypeScore=147.6194;InbreedingCoeff=-0.0553;MQ=46.91;MQ0=16;MQRankSum=-5.113;QD=2.68;ReadPosRankSum=0.025;VQSLOD=0.0338;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:30,2:31:57.40:59,0,57	0/1:9,0:9:22.86:23,0,50	0/0:42,0:14:2.79:0,3,54	0/1:41,0:10:19.87:20,0,36	1/1:37,3:39:16.03:168,16,0	0/1:20,1:18:8.59:9,0,46	0/1:19,0:19:5.94:44,0,6	0/1:30,0:29:32.13:32,0,52	1/1:12,0:12:3.04:7,3,0	0/0:25,0:24:17.33:0,17,136	0/0:19,1:20:2.67:0,3,264	0/1:19,1:20:47.81:48,0,80	0/1:18,0:18:31.22:31,0,45	0/1:17,0:17:18.92:19,0,115	0/0:22,0:22:14.06:0,14,92	0/1:23,1:24:19.20:82,0,19	0/0:24,0:23:14.34:0,14,129	0/1:7,0:6:4.89:10,0,5	1/1:14,6:18:26.58:233,27,0	1/1:15,10:23:12.01:280,12,0	0/1:5,3:8:1.66:69,0,2	0/0:11,0:10:5.18:0,5,61	0/0:19,0:20:7.03:0,7,130	0/0:10,0:10:8.62:0,9,58	0/1:23,1:24:21.12:58,0,21	0/0:21,0:21:31.16:0,31,228	0/1:15,0:14:2.41:2,0,105	0/0:9,0:9:11.43:0,11,75
chr10	9419685	.	TTG	T	811.75	PASS	AB=0.987;AC=14;AF=0.250;AN=56;BaseQRankSum=5.826;DP=578;FS=6.087;HRun=0;HaplotypeScore=145.8620;InbreedingCoeff=-0.0111;MQ=44.12;MQ0=15;MQRankSum=-5.753;QD=2.93;ReadPosRankSum=-4.334;VQSLOD=0.8402;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:33,0:32:1.58:89,2,0	0/0:11,0:11:3.16:0,3,275	0/1:35,1:11:8.24:8,0,101	0/0:39,0:7:3.11:0,3,104	0/1:38,0:37:55.69:259,0,56	0/1:21,0:18:6.18:95,0,6	0/1:17,0:17:24.05:68,0,24	0/1:26,2:27:31.37:162,0,31	0/1:10,0:10:1.75:2,0,119	0/1:22,0:21:22.16:22,0,358	0/0:20,0:20:30.04:0,30,676	0/0:19,0:19:11.81:0,12,447	0/0:19,0:19:8.22:0,8,270	0/0:18,0:18:34.98:0,35,487	0/0:20,0:20:26.86:0,27,313	0/1:23,1:24:40.52:123,0,41	0/0:23,0:22:12.94:0,13,441	0/1:12,0:11:2.87:67,0,3	0/0:19,0:17:32.40:0,32,289	0/0:28,0:26:15.43:0,15,386	0/0:8,0:8:8.32:0,8,122	0/1:12,0:11:8.54:9,0,197	0/0:21,0:21:24.90:0,25,410	0/0:10,0:10:9.03:0,9,144	1/1:24,0:24:3.13:53,3,0	0/0:22,0:22:40.35:0,40,711	0/0:14,0:14:13.69:0,14,331	0/0:7,3:10:10.13:0,10,175
chr10	9419687	.	G	GTT	2435.25	PASS	AB=0.996;AC=19;AF=0.339;AN=56;BaseQRankSum=8.459;DP=551;FS=2.432;HRun=10;HaplotypeScore=135.0634;InbreedingCoeff=0.4302;MQ=42.67;MQ0=16;MQRankSum=-10.691;QD=8.67;ReadPosRankSum=0.526;VQSLOD=1.0784;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:31,1:31:37.08:253,37,0	0/0:11,0:11:6.13:0,6,265	0/0:34,0:9:15.60:0,16,138	0/0:38,0:7:4.93:0,5,135	0/1:38,1:38:9.04:574,0,9	1/1:18,1:16:22.36:313,22,0	1/1:12,3:15:30.27:285,30,0	1/1:12,14:25:21.86:403,22,0	0/0:8,0:8:21.06:0,21,266	0/0:19,0:18:19.83:0,20,394	0/0:19,0:19:53.72:0,54,593	0/1:20,0:20:4.02:4,0,346	0/1:19,0:19:32.44:32,0,246	0/1:18,0:18:2.72:3,0,367	0/0:19,0:19:15.43:0,15,276	1/1:23,2:25:46.78:438,47,0	0/0:24,0:23:16.93:0,17,369	0/1:13,0:11:19.57:131,0,20	0/0:18,0:15:20.79:0,21,298	0/1:24,0:22:28.42:28,0,400	0/0:8,0:8:9.43:0,9,100	0/1:11,0:10:5.55:6,0,157	0/0:21,0:21:35.94:0,36,394	0/0:9,0:9:8.68:0,9,106	1/1:9,11:20:20.23:153,20,0	0/0:19,0:19:52.73:0,53,653	0/0:13,0:13:2.58:0,3,249	0/0:9,0:9:11.79:0,12,164
chr10	9421918	.	A	AT	7352.48	PASS	AB=1.000;AC=27;AF=0.482;AN=56;BaseQRankSum=-14.143;DP=634;FS=3.662;HRun=9;HaplotypeScore=62.2198;InbreedingCoeff=0.9236;MQ=75.01;MQ0=0;MQRankSum=-1.359;QD=24.84;ReadPosRankSum=2.661;VQSLOD=5.8253;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,1:31:47.77:0,48,639	1/1:1,9:10:24.06:266,24,0	0/1:11,0:11:5.84:6,0,128	0/0:12,0:12:15.49:0,15,147	0/0:30,0:30:74.98:0,75,651	0/0:17,0:17:50.99:0,51,443	0/0:14,0:14:41.99:0,42,365	0/0:33,0:33:86.96:0,87,755	1/1:4,15:19:42.11:465,42,0	0/0:28,0:27:71.96:0,72,621	0/0:15,0:15:44.99:0,45,391	1/1:1,12:13:27.07:299,27,0	1/1:3,21:24:51.13:564,51,0	1/1:4,18:22:54.15:597,54,0	0/0:31,0:31:80.92:0,81,692	0/0:18,0:18:47.97:0,48,413	1/1:1,19:20:31.10:571,31,0	0/0:22,0:22:56.98:0,57,495	1/1:8,17:25:5.03:504,5,0	1/1:1,30:31:81.15:871,81,0	1/1:3,14:17:39.11:431,39,0	1/1:2,12:14:34.34:368,34,0	0/0:29,0:29:83.98:0,84,729	0/0:30,0:30:77.91:0,78,665	0/0:28,0:28:77.97:0,78,677	1/1:6,28:34:61.18:903,61,0	1/1:5,33:39:93.08:1010,93,0	1/1:2,15:17:45.12:498,45,0
chr10	9422146	.	AT	A	7256.57	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-11.321;DP=629;FS=7.310;HRun=10;HaplotypeScore=80.0197;InbreedingCoeff=0.9901;MQ=77.96;MQ0=0;MQRankSum=-1.651;QD=21.60;ReadPosRankSum=3.205;VQSLOD=5.6862;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:25:58.61:0,59,320	1/1:0,9:9:26.99:234,27,0	0/0:17,0:16:33.07:0,33,350	0/0:17,0:16:20.35:0,20,305	0/0:4,0:28:65.71:0,66,365	0/0:5,0:33:82.65:0,83,439	0/0:3,0:26:68.09:0,68,354	0/0:7,0:22:48.10:0,48,245	1/1:1,22:23:62.99:547,63,0	1/1:2,30:32:89.97:781,90,0	1/1:1,20:21:50.97:443,51,0	1/1:3,17:20:47.98:417,48,0	1/1:2,19:21:53.99:469,54,0	1/1:1,21:22:59.99:521,60,0	1/1:2,25:27:68.98:599,69,0	0/0:2,0:26:62.66:0,63,325	1/1:3,22:26:65.02:553,65,0	0/0:2,0:16:34.26:0,34,189	0/0:30,0:29:46.21:0,46,686	0/0:3,0:27:68.50:0,68,360	0/0:0,0:5:8.52:0,9,43	1/1:3,18:21:44.96:391,45,0	1/1:2,21:24:50.01:422,50,0	1/1:2,12:15:35.03:292,35,0	0/0:2,0:20:42.11:0,42,249	1/1:1,29:30:83.98:729,84,0	1/1:1,28:29:71.98:625,72,0	1/1:4,12:16:26.97:234,27,0
chr10	9422463	.	G	GTCTCTCTCTC	5596.06	PASS	AB=1.000;AC=44;AF=0.846;AN=52;BaseQRankSum=-2.091;DP=516;FS=10.908;HRun=0;HaplotypeScore=163.6374;InbreedingCoeff=0.3007;MQ=64.60;MQ0=12;MQRankSum=0.960;QD=13.62;ReadPosRankSum=1.378;VQSLOD=2.8885;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:24:5.38:79,5,0	./.	./.	0/0:31,0:19:5.55:0,6,43	0/0:21,2:23:0.94:0,1,2	1/1:14,0:17:2.98:73,3,0	1/1:21,0:19:3.63:77,4,0	1/1:27,0:26:14.09:216,14,0	1/1:5,4:8:6.02:125,6,0	1/1:12,7:19:24.10:969,24,0	1/1:16,0:16:15.05:375,15,0	1/1:21,0:20:6.37:149,6,0	1/1:16,0:15:11.93:286,12,0	1/1:13,0:13:5.69:170,6,0	1/1:25,0:26:29.95:455,30,0	1/1:15,0:14:11.42:233,11,0	1/1:9,0:9:6.02:130,6,0	1/1:9,0:9:7.58:154,8,0	0/1:16,0:15:26.58:27,0,41	1/1:21,0:29:3.34:96,3,0	1/1:11,0:11:11.54:284,12,0	1/1:19,0:20:6.02:227,6,0	0/1:22,0:20:1.34:1,0,6	0/0:11,0:21:2.74:0,3,13	1/1:15,0:15:2.93:126,3,0	1/1:22,0:22:31.89:838,32,0	1/1:25,0:26:15.52:408,16,0	1/1:4,0:3:3.01:97,3,0
chr10	9422498	.	T	TCACACACACACACA	813.64	PASS	AB=0.950;AC=17;AF=0.327;AN=52;BaseQRankSum=0.798;DP=462;FS=23.293;HRun=0;HaplotypeScore=199.9775;InbreedingCoeff=0.4811;MQ=41.67;MQ0=11;MQRankSum=-4.336;QD=3.91;ReadPosRankSum=2.342;VQSLOD=1.0346;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:24:24.08:0,24,825	0/0:6,0:6:3.11:0,3,10	./.	./.	0/0:25,0:23:24.08:0,24,794	0/0:17,0:17:13.86:0,14,376	0/0:21,0:18:14.78:0,15,412	0/0:25,0:24:12.37:0,12,160	1/1:17,0:16:3.44:126,3,0	1/1:16,0:16:15.05:539,15,0	0/0:21,0:21:0.47:0,0,1	0/1:20,0:18:0.01:1,0,0	0/1:15,0:15:9.18:9,0,48	0/1:10,0:16:0.17:1,0,0	0/0:20,0:20:1.55:0,2,4	0/0:14,0:13:12.04:0,12,384	0/1:16,0:15:5.76:83,0,6	0/0:11,0:11:24.08:0,24,768	0/0:8,0:8:15.05:0,15,505	0/0:28,0:28:26.57:0,27,725	0/0:14,0:13:18.06:0,18,606	0/1:18,0:18:0:0,0,0	1/1:22,3:22:3.01:40,3,0	0/1:21,0:21:0.06:0,0,0	0/0:10,0:10:6.02:0,6,116	1/1:20,0:20:6.72:70,7,0	0/1:17,0:17:3.96:47,0,4	1/1:3,0:3:5.38:38,5,0
chr10	9422510	.	A	ACACACG	1778.78	PASS	AB=0.802;AC=14;AF=0.250;AN=56;BaseQRankSum=-1.887;DP=461;FS=11.667;HRun=0;HaplotypeScore=140.4099;InbreedingCoeff=0.2736;MQ=45.30;MQ0=9;MQRankSum=-0.223;QD=11.19;ReadPosRankSum=1.046;VQSLOD=2.2046;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:21:24.08:0,24,424	1/1:6,0:6:5.72:179,6,0	0/0:6,0:4:9.49:0,9,113	0/0:3,0:3:8.94:0,9,90	0/0:25,0:23:39.07:0,39,542	0/0:18,0:18:30.03:0,30,372	0/0:17,0:15:15.02:0,15,252	0/0:29,0:29:71.59:0,72,598	0/1:17,0:16:54.02:70,0,54	0/1:16,0:16:33.62:34,0,167	1/1:15,0:15:9.02:89,9,0	0/0:6,12:18:2.78:0,3,25	0/1:7,0:17:14.36:86,0,14	0/0:13,1:13:4.90:0,5,29	0/0:23,0:23:23.29:0,23,164	0/0:13,0:12:21.03:0,21,272	1/1:17,0:17:10.52:268,11,0	0/0:10,0:10:27.05:0,27,451	0/0:13,0:13:35.88:0,36,412	0/0:25,0:25:33.08:0,33,468	0/0:13,0:12:27.02:0,27,379	0/0:3,16:22:2.94:0,3,20	0/1:25,0:21:18.46:24,0,18	0/0:20,0:20:8.97:0,9,73	0/0:8,0:8:12.90:0,13,149	0/1:7,13:24:69.89:888,0,70	0/1:6,10:16:26.26:188,0,26	1/1:2,1:3:5.75:116,6,0
chr10	9422516	.	A	ACACACACACACACG	407.34	PASS	AB=1.000;AC=10;AF=0.185;AN=54;BaseQRankSum=-0.180;DP=483;FS=8.878;HRun=0;HaplotypeScore=196.8766;InbreedingCoeff=0.3455;MQ=47.10;MQ0=8;MQRankSum=-3.444;QD=3.42;ReadPosRankSum=-0.493;VQSLOD=2.0436;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:23:27.07:0,27,874	0/0:7,0:7:11.14:0,11,59	0/0:12,0:9:17.65:0,18,199	0/0:3,0:3:8.94:0,9,84	0/0:29,0:27:51.05:0,51,1064	0/0:19,0:19:33.03:0,33,586	0/0:18,0:16:17.90:0,18,491	0/0:26,0:26:57.78:0,58,613	0/1:16,0:15:22.04:98,0,22	1/1:13,0:14:28.26:342,28,0	./.	0/0:20,0:19:5.08:0,5,49	0/0:20,0:19:5.44:0,5,113	0/0:13,0:12:2.09:0,2,23	0/0:12,0:21:11.23:0,11,65	0/0:13,0:12:21.03:0,21,485	0/0:18,0:17:22.66:0,23,190	0/0:9,0:9:27.01:0,27,843	0/0:17,0:15:37.80:0,38,688	0/0:23,0:23:33.08:0,33,843	0/0:14,0:14:30.05:0,30,727	0/0:24,0:24:2.98:0,3,25	1/1:24,1:21:5.84:35,6,0	0/1:18,0:18:15.21:36,0,15	0/0:7,0:7:12.02:0,12,217	0/1:23,0:23:12.30:12,0,192	0/1:20,0:19:5.86:6,0,90	1/1:3,0:3:5.17:21,5,0
chr10	9423686	.	T	TC	793.21	PASS	AB=0.982;AC=32;AF=0.615;AN=52;BaseQRankSum=3.083;DP=301;FS=0.000;HRun=8;HaplotypeScore=64.2598;InbreedingCoeff=0.4736;MQ=65.34;MQ0=7;MQRankSum=-1.087;QD=4.56;ReadPosRankSum=-2.129;VQSLOD=-0.5418;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:19:10.23:0,10,80	./.	0/0:26,0:21:38.51:0,39,319	0/0:31,1:25:21.41:0,21,340	0/1:13,0:13:0:0,0,0	0/0:11,0:9:5.95:0,6,44	0/0:13,0:13:9.89:0,10,78	0/0:15,0:15:17.36:0,17,141	./.	1/1:13,0:12:26.95:251,27,0	1/1:9,1:10:17.60:151,18,0	1/1:8,0:8:8.17:109,8,0	0/1:8,0:8:11.53:18,0,12	1/1:4,0:4:3.59:27,4,0	0/1:13,0:13:0.01:0,0,0	0/1:13,0:13:9.35:9,0,13	1/1:9,0:11:4.94:65,5,0	0/0:4,0:4:1.70:0,2,34	1/1:8,3:9:8.10:99,8,0	1/1:7,0:7:6:58,6,0	1/1:7,1:8:3.01:33,3,0	1/1:3,0:3:3.63:14,4,0	1/1:10,1:9:4.83:39,5,0	0/1:15,2:16:0:0,0,0	0/1:12,0:12:0:0,0,0	1/1:6,0:6:3.87:25,4,0	1/1:1,0:5:5.59:26,6,0	1/1:1,0:1:2.99:24,3,0
chr10	9423693	.	C	CCTCTCTCT	2270.06	PASS	AB=0.848;AC=32;AF=0.667;AN=48;BaseQRankSum=1.181;DP=313;FS=0.000;HRun=0;HaplotypeScore=96.2742;InbreedingCoeff=0.2547;MQ=59.95;MQ0=10;MQRankSum=-2.709;QD=8.90;ReadPosRankSum=-1.191;VQSLOD=1.3302;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:4,17:20:6.02:161,6,0	./.	0/0:20,0:15:30.07:0,30,649	0/1:28,0:21:6.32:6,0,615	0/1:3,6:9:0:0,0,0	1/1:1,9:9:3.01:76,3,0	0/1:12,0:12:54.86:282,0,55	1/1:14,0:14:19.27:232,19,0	1/1:2,0:4:0.47:1,0,0	1/1:3,0:15:27.09:479,27,0	1/1:7,0:8:6.02:138,6,0	0/0:9,0:9:5.59:0,6,34	0/0:9,0:9:2.80:0,3,7	./.	1/1:4,0:20:5.07:173,5,0	1/1:8,0:16:5.51:97,6,0	0/1:12,0:12:60.75:61,0,112	1/1:4,2:5:6.01:153,6,0	1/1:8,0:7:15.99:319,16,0	./.	1/1:2,0:9:3.48:49,3,0	0/0:3,0:3:2.94:0,3,18	1/1:3,0:11:2.52:98,3,0	0/1:8,0:19:0.09:0,0,0	1/1:5,7:13:0.93:2,1,0	0/1:6,0:6:74.42:74,0,101	0/0:5,0:5:1.36:0,1,3	./.
chr10	9424633	.	T	TTG	6822.80	PASS	AB=0.958;AC=17;AF=0.304;AN=56;BaseQRankSum=-13.451;DP=877;FS=0.000;HRun=0;HaplotypeScore=157.7444;InbreedingCoeff=0.9424;MQ=64.24;MQ0=2;MQRankSum=0.986;QD=25.27;ReadPosRankSum=0.266;VQSLOD=5.5384;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,25:30:63.21:997,63,0	0/0:15,0:14:33.05:0,33,368	0/0:35,0:24:22.79:0,23,344	0/0:37,0:26:32.98:0,33,357	1/1:7,25:34:66.22:1031,66,0	1/1:10,16:26:48.16:746,48,0	1/1:9,11:20:33:528,33,0	1/1:27,19:47:61.04:889,61,0	0/0:4,0:27:52.39:0,52,247	0/0:31,0:32:75.01:0,75,838	0/1:22,1:23:3.02:3,0,384	0/0:22,0:22:33.09:0,33,396	0/0:38,0:39:59.99:0,60,674	0/0:36,0:37:44.91:0,45,486	0/0:52,0:51:99:0,99,1161	1/1:11,21:32:63.21:988,63,0	0/0:24,0:25:35.54:0,36,376	1/1:12,19:31:55.07:860,55,0	0/0:22,0:21:45.12:0,45,560	0/0:32,0:32:57.16:0,57,666	0/0:40,0:42:84.24:0,84,883	0/0:36,0:37:77.91:0,78,865	0/0:39,0:40:69.16:0,69,807	0/0:27,0:27:51.57:0,52,585	1/1:10,17:27:43.22:782,43,0	0/0:28,0:28:60.45:0,60,688	0/0:38,0:39:72.02:0,72,825	0/0:17,0:17:48.08:0,48,546
chr10	9424673	.	TGTAA	T	2077.55	PASS	AB=0.989;AC=21;AF=0.375;AN=56;BaseQRankSum=-1.752;DP=829;FS=0.000;HRun=0;HaplotypeScore=239.0697;InbreedingCoeff=0.4671;MQ=55.03;MQ0=9;MQRankSum=0.737;QD=5.79;ReadPosRankSum=-4.306;VQSLOD=1.3445;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:30:5.91:0,6,1260	0/1:14,0:13:13.13:13,0,18	0/0:57,0:28:59.32:0,59,812	0/0:37,0:24:12.25:0,12,550	0/1:39,1:40:8.43:8,0,1507	0/0:22,1:22:39.24:0,39,1044	0/1:16,1:17:16.73:17,0,643	0/1:34,0:34:50.68:51,0,1087	0/1:31,0:30:4.39:4,0,283	0/0:26,0:26:49.55:0,50,1358	0/1:19,0:19:3.98:4,0,587	1/1:17,0:17:10.06:162,10,0	1/1:39,0:39:21.86:223,22,0	1/1:31,0:31:15.25:209,15,0	0/0:51,0:51:99:0,120,2638	0/0:33,1:34:52.42:0,52,1598	1/1:19,0:19:9.37:62,9,0	0/0:28,2:30:6.57:0,7,1155	0/0:23,0:23:22.46:0,22,415	0/0:30,0:30:40.14:0,40,262	0/0:30,0:30:37.84:0,38,281	1/1:28,0:28:31.03:351,31,0	0/0:36,0:36:73.84:0,74,1435	0/0:33,0:33:72.15:0,72,1459	0/0:29,0:29:81.15:0,81,1538	0/1:28,0:27:99:456,0,111	1/1:31,0:31:24.98:429,25,0	1/1:11,0:11:26.94:281,27,0
chr10	9424682	.	G	GTATCTATCTATC	5116.11	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=-1.646;DP=834;FS=5.681;HRun=0;HaplotypeScore=319.8504;InbreedingCoeff=0.1769;MQ=53.99;MQ0=8;MQRankSum=-6.379;QD=14.74;ReadPosRankSum=-1.000;VQSLOD=2.6166;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:30:69.23:0,69,1342	0/1:16,0:15:50.05:331,0,50	0/0:53,0:23:60.90:0,61,1213	0/0:31,0:21:4.48:0,4,895	0/0:38,0:38:95.88:0,96,1912	0/0:24,0:23:63.13:0,63,1029	0/0:16,0:16:44.69:0,45,740	0/0:35,0:35:95.77:0,96,1956	0/1:32,0:31:99:618,0,144	0/0:26,0:26:75.22:0,75,1440	0/0:20,0:20:36.10:0,36,603	0/1:15,0:15:99:227,0,105	0/1:39,0:39:97.55:214,0,98	0/1:38,0:38:36.75:231,0,37	0/0:53,0:53:99:0,111,2449	0/0:33,0:33:93.23:0,93,1603	1/1:20,0:20:3.01:139,3,0	0/0:30,0:30:78.14:0,78,1363	1/1:8,9:24:17.56:878,18,0	1/1:6,23:35:21.07:1224,21,0	1/1:24,0:24:8.93:166,9,0	0/1:30,0:30:99:114,0,384	0/0:34,0:34:62.24:0,62,1281	0/0:32,0:32:63.13:0,63,1207	0/0:30,0:30:78.21:0,78,1485	0/1:31,0:30:99:731,0,344	0/1:32,0:32:99:233,0,255	0/1:11,0:11:10.24:10,0,188
chr10	9424686	.	G	GTATCTATCTATC	6430.18	PASS	AB=0.859;AC=23;AF=0.411;AN=56;BaseQRankSum=-2.383;DP=831;FS=3.531;HRun=0;HaplotypeScore=307.3354;InbreedingCoeff=0.6485;MQ=53.90;MQ0=7;MQRankSum=-6.221;QD=18.69;ReadPosRankSum=-0.820;VQSLOD=3.3432;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:31:72.05:0,72,764	1/1:3,13:18:3.10:443,3,0	0/0:53,0:25:41.66:0,42,786	0/0:33,0:24:16:0,16,751	0/0:42,0:42:99:0,103,1206	0/0:23,0:22:66.02:0,66,713	0/0:14,0:14:36.96:0,37,444	0/0:34,0:34:98.71:0,99,1272	0/1:32,0:31:26.43:662,0,26	0/0:25,0:25:57.17:0,57,830	0/0:21,0:21:33.01:0,33,353	1/1:3,10:18:5.70:313,6,0	1/1:5,30:37:5.85:300,6,0	1/1:7,25:37:9.01:335,9,0	0/0:53,0:53:99:0,105,1287	0/0:34,0:34:96.10:0,96,1089	1/1:5,15:24:3.01:174,3,0	0/0:26,0:26:74.96:0,75,817	0/1:17,0:17:11.90:749,0,12	1/1:30,0:30:27.07:1272,27,0	1/1:22,0:22:9.80:142,10,0	1/1:9,18:29:5.07:201,5,0	0/0:36,0:36:61.96:0,62,685	0/0:30,0:30:54.13:0,54,628	0/0:30,0:30:72.36:0,72,923	0/1:9,16:33:12.03:1320,0,12	1/1:35,0:35:17.04:433,17,0	1/1:10,0:10:6.04:86,6,0
chr10	9424690	.	G	GTATC	16781.58	PASS	AB=1.000;AC=49;AF=0.875;AN=56;BaseQRankSum=-1.563;DP=823;FS=5.701;HRun=0;HaplotypeScore=181.3291;InbreedingCoeff=0.6996;MQ=53.89;MQ0=8;MQRankSum=-0.620;QD=23.54;ReadPosRankSum=4.496;VQSLOD=4.2664;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:21,12:32:54.13:1142,54,0	1/1:17,0:16:9.50:121,10,0	0/0:53,0:24:6.65:0,7,328	0/0:34,0:24:36.46:0,36,415	1/1:27,16:43:34.93:1561,35,0	1/1:10,11:20:54.12:1095,54,0	1/1:13,3:16:35.95:684,36,0	1/1:36,0:36:48.05:687,48,0	1/1:32,0:31:26.85:415,27,0	1/1:7,18:26:57.12:1132,57,0	1/1:4,18:24:30.03:633,30,0	1/1:15,0:15:5.73:75,6,0	1/1:28,0:28:6.02:71,6,0	1/1:30,0:30:9.01:99,9,0	1/1:14,38:53:63.22:1540,63,0	1/1:22,13:35:75.16:1442,75,0	0/0:23,0:23:1.14:0,1,3	1/1:17,10:27:57.05:1196,57,0	1/1:20,0:20:35.59:377,36,0	1/1:29,0:29:33.02:459,33,0	0/1:22,0:22:0.01:0,0,0	1/1:28,0:28:19.87:167,20,0	1/1:7,30:40:36.06:880,36,0	1/1:5,24:30:42.14:1026,42,0	1/1:17,13:30:57.14:1185,57,0	1/1:28,1:28:49.34:696,49,0	1/1:12,1:40:6.96:96,7,0	1/1:9,0:9:0.47:2,0,0
chr10	9425927	.	CTT	C	731.90	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.123;DP=594;FS=11.922;HRun=4;HaplotypeScore=67.9387;InbreedingCoeff=0.9916;MQ=72.47;MQ0=1;MQRankSum=0.193;QD=36.59;ReadPosRankSum=0.891;VQSLOD=2.2319;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:27.09:0,27,521	0/0:11,0:11:33.11:0,33,630	0/0:11,0:11:33.11:0,33,612	0/0:16,0:16:36.10:0,36,661	0/0:36,0:36:99:0,102,1926	0/0:36,0:36:99:0,108,1983	0/0:9,0:9:24.07:0,24,419	0/0:39,0:39:99:0,117,2194	1/1:0,20:20:54.18:827,54,0	0/0:25,0:25:69.22:0,69,1268	0/0:34,0:34:99:0,102,1841	0/0:28,0:28:84.29:0,84,1616	0/0:23,0:23:69.24:0,69,1311	0/0:27,0:27:78.27:0,78,1502	0/0:26,0:26:75.26:0,75,1449	0/0:17,0:17:51.17:0,51,974	0/0:18,0:18:51.17:0,51,985	0/0:16,0:15:45.15:0,45,846	0/0:14,0:14:42.12:0,42,737	0/0:28,0:28:84.29:0,84,1594	0/0:12,0:12:36.12:0,36,696	0/0:22,0:22:66.22:0,66,1238	0/0:16,0:16:48.16:0,48,927	0/0:10,0:10:29.84:0,30,526	0/0:21,0:21:63.17:0,63,1179	0/0:30,0:30:90.31:0,90,1739	0/0:33,0:33:99:0,99,1851	0/0:7,0:7:21.07:0,21,396
chr10	9427944	.	A	AT	7483.34	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-15.626;DP=648;FS=12.524;HRun=1;HaplotypeScore=60.5915;InbreedingCoeff=0.9927;MQ=73.42;MQ0=0;MQRankSum=-0.461;QD=39.39;ReadPosRankSum=2.155;VQSLOD=4.5509;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:84.20:0,84,1028	0/0:13,0:13:39.11:0,39,492	0/0:16,0:16:21.67:0,22,292	0/0:9,0:9:18.01:0,18,193	0/0:31,0:31:90.27:0,90,1150	0/0:25,0:25:72.22:0,72,919	0/0:19,0:19:57.19:0,57,738	0/0:43,0:43:99:0,123,1585	0/0:25,0:25:72.23:0,72,931	1/1:2,26:28:79.14:1151,79,0	1/1:0,33:33:96.32:1432,96,0	0/0:22,0:22:66.21:0,66,857	0/0:23,0:23:60.18:0,60,764	0/0:22,0:22:66.20:0,66,840	1/1:4,23:27:66.22:989,66,0	0/0:25,0:25:75.24:0,75,961	0/0:13,0:13:39.13:0,39,506	0/0:12,0:12:33.11:0,33,428	1/1:1,19:20:60.16:855,60,0	1/1:1,26:27:75.25:1124,75,0	1/1:1,18:19:42.14:629,42,0	0/0:33,0:33:99:0,99,1280	1/1:1,22:23:60.20:899,60,0	1/1:2,11:13:27.09:405,27,0	0/0:27,0:27:81.25:0,81,1038	0/0:41,1:42:78.41:0,78,1487	0/0:25,0:25:72.23:0,72,934	0/0:4,0:4:12.04:0,12,156
chr10	9430056	.	ATG	A	2235.94	PASS	AB=0.600;AC=13;AF=0.241;AN=54;BaseQRankSum=10.368;DP=392;FS=6.894;HRun=0;HaplotypeScore=77.4070;InbreedingCoeff=0.8982;MQ=64.90;MQ0=0;MQRankSum=-5.716;QD=28.67;ReadPosRankSum=-2.223;VQSLOD=3.9037;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:57.19:0,57,987	0/0:8,0:8:24.08:0,24,415	0/0:7,0:4:2.68:0,3,11	0/0:15,0:11:17.70:0,18,264	0/0:19,0:19:54.18:0,54,935	0/0:14,0:14:33.11:0,33,572	0/0:10,0:10:18.06:0,18,312	0/0:29,0:29:69.24:0,69,1188	0/0:5,0:5:12.04:0,12,208	1/1:2,16:18:51.15:660,51,0	1/1:1,13:14:36.12:479,36,0	0/0:18,0:18:51.16:0,51,853	0/0:12,0:12:36.12:0,36,621	0/0:12,0:12:33.11:0,33,571	1/1:1,12:13:27.09:359,27,0	0/0:14,0:14:29.05:0,29,627	0/0:21,0:21:57.17:0,57,957	0/0:20,0:19:51.17:0,51,883	1/1:3,4:7:15.05:199,15,0	1/1:0,14:14:36.12:479,36,0	./.	0/0:6,0:6:15.03:0,15,232	1/1:0,9:9:18.06:239,18,0	0/1:1,2:3:0:0,0,0	0/0:20,0:20:57.20:0,57,987	0/0:29,0:29:78.24:0,78,1270	0/0:28,0:28:81.28:0,81,1382	0/0:2,0:2:6.02:0,6,104
chr10	9430074	.	GTA	G	1338.36	PASS	AB=0.500;AC=15;AF=0.278;AN=54;BaseQRankSum=9.785;DP=412;FS=8.483;HRun=0;HaplotypeScore=92.4891;InbreedingCoeff=0.8697;MQ=69.10;MQ0=1;MQRankSum=-6.925;QD=16.94;ReadPosRankSum=-1.657;VQSLOD=2.6195;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,1:23:10.32:0,10,710	0/0:8,0:8:24.08:0,24,390	0/0:14,0:4:4:0,4,32	0/0:29,0:18:12.99:0,13,145	0/0:19,1:20:16.33:0,16,793	0/0:14,0:14:36.12:0,36,598	0/0:5,0:5:9.03:0,9,150	0/0:35,0:35:42.63:0,43,1197	1/1:2,2:4:3.01:38,3,0	1/1:16,0:16:32.98:298,33,0	1/1:17,0:17:45.03:428,45,0	0/0:18,0:18:36.12:0,36,583	0/0:14,0:14:42.14:0,42,698	0/0:11,0:11:24.08:0,24,398	1/1:13,0:13:20.68:174,21,0	0/0:11,0:11:23.11:0,23,355	0/0:22,1:23:25.33:0,25,906	0/0:19,0:18:51.17:0,51,836	1/1:2,5:7:15.05:189,15,0	1/1:6,6:12:24.04:274,24,0	0/1:0,1:1:0:0,0,0	0/0:5,0:5:15.05:0,15,249	1/1:9,0:9:12.02:121,12,0	./.	0/0:19,1:19:13.29:0,13,734	0/0:27,0:27:50.34:0,50,1093	0/0:28,0:28:75.26:0,75,1235	0/0:7,0:7:21.07:0,21,349
chr10	9430087	.	TAC	T	1925.53	PASS	AB=1.000;AC=14;AF=0.250;AN=56;BaseQRankSum=10.353;DP=408;FS=5.703;HRun=0;HaplotypeScore=93.8877;InbreedingCoeff=0.6844;MQ=71.09;MQ0=1;MQRankSum=-5.840;QD=26.38;ReadPosRankSum=-1.193;VQSLOD=4.3379;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:52.08:0,52,1037	0/0:8,0:8:24.05:0,24,413	0/0:15,0:4:2.76:0,3,43	0/0:34,0:23:0.28:0,0,153	0/0:18,0:18:40.13:0,40,977	0/0:14,0:14:42.11:0,42,771	0/0:5,0:5:15:0,15,228	0/0:37,0:37:90.59:0,91,1682	0/1:3,0:3:7.04:12,0,7	1/1:5,10:15:42.12:613,42,0	1/1:1,16:17:45.15:720,45,0	0/0:14,0:14:39.06:0,39,671	0/0:14,0:14:42.14:0,42,843	0/0:9,0:9:27.08:0,27,491	1/1:5,6:11:27.03:338,27,0	0/0:10,0:10:16.47:0,16,439	0/0:23,0:23:49.49:0,49,1188	0/0:20,0:19:57.07:0,57,1045	0/1:9,0:9:41.19:74,0,41	1/1:8,0:8:17.76:131,18,0	0/0:3,0:3:2.80:0,3,24	0/0:6,0:6:18.04:0,18,327	1/1:0,7:7:12.04:192,12,0	1/1:1,2:3:2.99:24,3,0	0/0:17,0:16:30.18:0,30,913	0/0:27,1:28:35.19:0,35,1413	0/0:27,0:27:80.44:0,80,1501	0/0:8,0:8:23.97:0,24,441
chr10	9430147	.	T	TTG	754.33	PASS	AB=0.952;AC=28;AF=0.609;AN=46;BaseQRankSum=-1.538;DP=473;FS=3.858;HRun=0;HaplotypeScore=118.9795;InbreedingCoeff=0.0395;MQ=49.91;MQ0=24;MQRankSum=1.631;QD=2.16;ReadPosRankSum=0.393;VQSLOD=2.4343;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:36,0:34:8.59:132,9,0	./.	./.	./.	1/1:20,0:20:9.44:78,9,0	0/1:21,0:21:11.15:15,0,11	0/1:20,0:16:16.08:104,0,16	1/1:31,0:31:1.25:3,1,0	0/0:7,0:6:2.75:0,3,32	0/1:20,0:19:0.76:4,0,1	1/1:17,0:16:2.99:24,3,0	1/1:6,6:13:2.63:44,3,0	0/1:14,0:13:28.96:29,0,52	1/1:14,0:13:6.97:127,7,0	./.	0/1:9,0:9:38.78:45,0,39	0/1:19,6:25:16.73:76,0,17	1/1:17,0:16:6.02:67,6,0	./.	1/1:14,0:14:0.89:19,1,0	0/0:20,0:16:3.44:0,3,25	0/0:6,0:5:2.97:0,3,24	0/1:13,0:11:0.38:1,0,0	1/1:14,0:12:2.33:19,2,0	1/1:27,0:25:5.90:63,6,0	0/0:29,0:28:7.87:0,8,63	0/1:18,6:24:27.38:37,0,27	0/0:15,0:13:2.87:0,3,18
chr10	9430196	.	T	TGA	3945.71	PASS	AB=0.888;AC=34;AF=0.607;AN=56;BaseQRankSum=0.939;DP=477;FS=6.082;HRun=0;HaplotypeScore=89.6371;InbreedingCoeff=0.6114;MQ=55.18;MQ0=34;MQRankSum=1.623;QD=13.11;ReadPosRankSum=1.643;VQSLOD=3.1744;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:33,2:33:75.01:754,75,0	0/0:4,0:4:8.98:0,9,73	0/0:42,0:13:36.06:0,36,387	0/0:35,0:9:25.30:0,25,268	1/1:18,0:18:44.05:429,44,0	1/1:15,1:16:35.50:296,36,0	0/1:3,13:15:16.04:203,0,16	1/1:17,0:17:44.98:400,45,0	0/1:2,0:2:17.98:18,0,26	1/1:12,0:12:30.60:239,31,0	1/1:14,0:13:14.96:120,15,0	0/1:16,0:15:5.14:5,0,141	0/0:19,0:18:34.67:0,35,351	0/1:15,0:15:8.55:9,0,177	1/1:15,0:14:14.46:106,14,0	1/1:13,1:14:14.52:297,15,0	0/0:20,0:20:2.99:0,3,260	1/1:2,7:9:6.02:113,6,0	1/1:13,0:10:23.93:198,24,0	1/1:11,1:13:12.02:136,12,0	1/1:20,0:18:35.21:293,35,0	0/0:7,0:6:14.98:0,15,140	1/1:11,0:9:0.60:20,1,0	1/1:17,0:17:22.52:177,23,0	1/1:7,20:26:8.75:134,9,0	0/0:21,0:20:54.06:0,54,539	0/0:16,0:16:5.94:0,6,168	0/0:12,0:11:23.92:0,24,202
chr10	9433945	.	TCACACACA	T	3989.44	PASS	AB=0.706;AC=19;AF=0.365;AN=52;BaseQRankSum=8.252;DP=642;FS=3.088;HRun=0;HaplotypeScore=161.5198;InbreedingCoeff=0.6287;MQ=59.17;MQ0=19;MQRankSum=-8.740;QD=14.67;ReadPosRankSum=1.308;VQSLOD=2.3518;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:23,4:26:29.39:532,29,0	0/0:12,0:12:23.26:0,23,610	./.	./.	1/1:10,12:22:1.11:494,1,0	1/1:15,13:29:29.93:658,30,0	1/1:12,12:24:11.10:499,11,0	0/1:20,8:27:27.24:243,0,27	0/0:11,0:21:24.06:0,24,593	0/0:17,0:17:33.11:0,33,1135	0/0:19,0:22:45.09:0,45,1289	0/0:21,0:23:33.07:0,33,955	0/0:13,0:15:30.08:0,30,1044	0/0:25,0:26:51.63:0,52,1748	0/0:25,0:30:57.18:0,57,1890	1/1:14,10:24:14.79:360,15,0	0/0:13,0:17:33.10:0,33,1060	0/1:11,6:15:10.50:70,0,11	0/1:4,0:12:50.11:160,0,50	1/1:14,0:33:6.35:452,6,0	1/1:12,0:23:2.68:11,3,0	0/0:25,0:26:39.60:0,40,1329	0/0:20,0:19:48.07:0,48,1615	0/0:23,0:25:51.15:0,51,1549	1/1:10,15:25:3.09:510,3,0	0/0:28,0:26:47.97:0,48,1134	0/0:23,0:24:45.15:0,45,1474	0/0:10,0:10:24.06:0,24,777
chr10	9434395	.	GATAACCC	G	10460.86	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=16.922;DP=728;FS=6.777;HRun=0;HaplotypeScore=177.8775;InbreedingCoeff=0.9608;MQ=81.42;MQ0=0;MQRankSum=-16.180;QD=56.24;ReadPosRankSum=2.614;VQSLOD=4.5520;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,114,4402	0/0:15,0:15:45.15:0,45,1664	0/0:29,0:29:84.28:0,84,3099	0/0:16,0:16:48.16:0,48,1715	0/0:26,0:26:78.27:0,78,3098	0/0:28,0:27:78.27:0,78,3081	0/0:27,0:27:81.28:0,81,3202	0/0:28,0:28:81.27:0,81,2895	0/0:36,0:36:99:0,108,4233	1/1:5,20:25:57.20:1473,57,0	1/1:1,18:18:42.14:1084,42,0	0/0:21,0:21:63.22:0,63,2469	0/0:29,0:29:87.30:0,87,3474	0/0:44,0:44:99:0,132,4982	1/1:0,43:43:99:2925,111,0	0/0:26,0:26:78.27:0,78,3075	0/0:42,0:42:99:0,118,4499	0/0:21,0:21:60.21:0,60,2343	1/1:2,12:14:33.11:787,33,0	1/1:3,34:36:90.31:2322,90,0	1/1:4,15:19:27.09:690,27,0	0/0:24,0:24:69.24:0,69,2605	1/1:0,17:17:33.11:869,33,0	1/1:1,11:12:12.12:310,12,0	0/0:26,0:26:75.26:0,75,2805	0/0:26,1:27:2.17:0,2,2765	0/0:32,0:31:93.32:0,93,3712	0/0:6,0:6:18.06:0,18,559
chr10	9434660	.	TCA	T	4501.65	PASS	AB=0.708;AC=32;AF=0.571;AN=56;BaseQRankSum=-8.865;DP=593;FS=0.548;HRun=0;HaplotypeScore=112.2369;InbreedingCoeff=0.6894;MQ=63.35;MQ0=20;MQRankSum=6.958;QD=12.07;ReadPosRankSum=3.075;VQSLOD=4.2125;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:17,18:34:29.91:318,30,0	1/1:0,2:3:8.86:82,9,0	0/0:30,0:23:5.20:0,5,61	0/0:21,0:16:4.25:0,4,31	1/1:8,16:25:32.93:352,33,0	1/1:13,9:22:29.59:295,30,0	1/1:11,14:27:29.92:318,30,0	1/1:23,6:29:11.51:124,12,0	1/1:8,0:15:14.20:70,14,0	0/0:24,0:20:23.69:0,24,165	0/0:18,0:15:17.11:0,17,114	1/1:10,11:23:29.75:298,30,0	1/1:9,13:21:28.82:335,29,0	1/1:4,14:19:32.93:352,33,0	0/0:26,0:22:25.94:0,26,198	1/1:5,9:15:23.90:251,24,0	1/1:9,15:24:29.95:337,30,0	0/1:10,9:18:1.22:181,0,1	0/0:11,0:10:7.80:0,8,53	0/0:18,0:17:29.33:0,29,208	0/0:34,0:32:14.82:0,15,106	1/1:3,7:11:14.88:149,15,0	0/0:11,0:11:11.87:0,12,88	0/0:27,0:27:20.59:0,21,142	0/1:9,17:27:22.86:313,0,23	0/1:14,4:17:54.16:203,0,54	1/1:5,14:19:30.61:369,31,0	0/1:11,4:16:1.53:154,0,2
chr10	9434672	.	A	ACACACAC	3577.64	PASS	AB=0.994;AC=13;AF=0.232;AN=56;BaseQRankSum=1.247;DP=626;FS=0.000;HRun=0;HaplotypeScore=173.4941;InbreedingCoeff=0.4466;MQ=53.79;MQ0=24;MQRankSum=-8.607;QD=18.07;ReadPosRankSum=0.700;VQSLOD=2.7681;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:41:77.90:0,78,1096	0/0:5,0:5:9.03:0,9,161	0/0:28,0:20:17.38:0,17,432	0/0:26,0:17:0.81:0,1,312	0/0:27,0:27:57.18:0,57,885	0/0:25,0:24:57.65:0,58,875	0/0:27,0:27:45.15:0,45,712	0/0:29,0:28:69.18:0,69,869	0/0:17,0:17:33.11:0,33,469	0/1:26,0:21:99:174,0,133	1/1:15,0:12:8.01:161,8,0	0/0:25,0:25:57.18:0,57,871	0/0:23,0:22:54.08:0,54,793	0/0:19,0:19:41.96:0,42,695	0/1:29,0:26:26.72:489,0,27	0/0:15,0:15:33.11:0,33,535	0/0:21,0:21:42.11:0,42,655	0/0:18,0:17:30.73:0,31,479	1/1:3,12:15:39.04:670,39,0	1/1:7,7:15:36.08:1117,36,0	1/1:23,1:30:35.02:525,35,0	0/0:15,0:15:27.09:0,27,421	0/1:9,0:9:23.05:168,0,23	0/1:29,0:29:13.76:254,0,14	0/0:27,0:27:54.16:0,54,879	0/1:25,0:22:19.78:20,0,717	0/0:25,0:24:58.44:0,58,925	0/0:13,0:13:39.13:0,39,625
chr10	9434674	.	A	ACACACACAC	4745.12	PASS	AB=0.987;AC=17;AF=0.304;AN=56;BaseQRankSum=-1.412;DP=639;FS=0.000;HRun=0;HaplotypeScore=193.3808;InbreedingCoeff=0.5842;MQ=53.65;MQ0=24;MQRankSum=-8.485;QD=18.25;ReadPosRankSum=1.485;VQSLOD=3.9346;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:41:74.91:0,75,1165	0/0:5,0:5:9.03:0,9,201	0/1:28,0:20:7.14:7,0,263	0/1:27,0:17:8.71:9,0,312	0/0:27,0:27:54.18:0,54,1001	0/0:25,0:24:55.73:0,56,953	0/0:27,0:27:42.11:0,42,777	0/0:34,0:33:76.75:0,77,936	0/0:16,0:16:30.08:0,30,477	1/1:19,1:21:46.93:854,47,0	1/1:12,4:15:17.93:591,18,0	0/0:24,0:24:54.18:0,54,974	0/0:24,0:23:53.37:0,53,902	0/0:19,0:19:42.13:0,42,839	1/1:10,19:26:42.01:1249,42,0	0/0:15,0:15:36.11:0,36,630	0/0:21,0:21:35.48:0,35,678	0/0:16,0:15:31.65:0,32,532	0/1:17,0:16:9.06:225,0,9	1/1:16,0:16:10.42:374,10,0	0/1:30,0:29:46.79:142,0,47	0/0:15,0:15:27.09:0,27,487	1/1:4,4:9:12.04:512,12,0	1/1:4,25:30:21.46:756,21,0	0/0:29,0:29:63.17:0,63,1129	0/1:26,0:24:24.63:25,0,790	0/0:25,0:24:58.44:0,58,1059	0/0:14,0:14:39.13:0,39,687
chr10	9434682	.	A	AC	673.39	PASS	AB=0.904;AC=6;AF=0.107;AN=56;BaseQRankSum=7.909;DP=646;FS=0.654;HRun=1;HaplotypeScore=121.8970;InbreedingCoeff=0.2544;MQ=52.07;MQ0=23;MQRankSum=-6.458;QD=5.86;ReadPosRankSum=0.962;VQSLOD=0.3667;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:40:77.08:0,77,768	0/0:6,0:6:14.66:0,15,121	0/0:30,0:18:42.10:0,42,500	0/0:24,0:13:36.11:0,36,453	0/0:26,0:26:55.94:0,56,481	0/0:27,0:26:58.75:0,59,546	0/0:31,0:31:62.05:0,62,562	0/0:35,0:34:93.93:0,94,1066	0/0:15,0:15:32.03:0,32,274	0/1:22,3:20:99:145,0,359	0/1:15,3:15:17.19:211,0,17	0/0:21,0:21:50.44:0,50,425	0/0:23,0:22:56.11:0,56,505	0/0:20,0:20:43.89:0,44,315	0/1:27,2:25:99:115,0,146	0/0:15,0:15:38.17:0,38,301	0/0:20,0:20:37.42:0,37,246	0/0:16,0:15:32.49:0,32,289	0/0:17,0:16:39.27:0,39,339	0/0:18,0:17:38.82:0,39,333	0/0:35,0:33:30.04:0,30,336	0/0:15,0:15:29.46:0,29,268	0/1:12,1:13:58.52:100,0,59	1/1:30,0:30:22.73:233,23,0	0/0:29,0:29:64.97:0,65,596	0/0:26,0:23:68.33:0,68,680	0/0:26,0:25:60.52:0,61,504	0/0:14,0:14:41.53:0,42,408
chr10	9434747	.	AG	A	4174.18	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=10.461;DP=552;FS=1.690;HRun=6;HaplotypeScore=69.5696;InbreedingCoeff=0.9993;MQ=79.35;MQ0=0;MQRankSum=-4.604;QD=27.83;ReadPosRankSum=2.526;VQSLOD=4.3779;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:26:78.23:0,78,1008	0/0:10,0:10:30.10:0,30,394	0/0:18,0:18:46.91:0,47,550	0/0:21,0:21:63.19:0,63,788	0/0:20,0:20:60.17:0,60,761	0/0:26,0:26:78.25:0,78,1024	0/0:28,0:28:78.22:0,78,986	0/0:33,0:33:96.30:0,96,1233	0/0:17,0:17:51.17:0,51,670	1/1:3,16:19:48.12:515,48,0	1/1:0,16:16:45.07:471,45,0	0/0:14,0:14:39.13:0,39,513	0/0:21,0:21:60.19:0,60,777	0/0:18,0:18:45.15:0,45,590	1/1:4,15:18:48.12:515,48,0	0/0:14,0:14:39.13:0,39,513	0/0:21,0:21:54.15:0,54,680	0/0:15,0:15:30.10:0,30,391	1/1:0,9:9:27.07:290,27,0	1/1:1,22:23:63.16:676,63,0	1/1:1,27:28:66.17:709,66,0	0/0:10,0:10:27.09:0,27,354	1/1:0,13:13:39.10:419,39,0	1/1:3,20:23:54.14:579,54,0	0/0:27,0:27:75.23:0,75,962	0/0:22,0:22:66.21:0,66,868	0/0:31,0:31:90.29:0,90,1169	0/0:9,0:9:27.09:0,27,354
chr10	9434888	.	T	TA	4652.43	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-0.193;DP=485;FS=2.978;HRun=1;HaplotypeScore=50.7531;InbreedingCoeff=0.9460;MQ=68.90;MQ0=0;MQRankSum=0.438;QD=38.77;ReadPosRankSum=1.628;VQSLOD=5.3561;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:54.17:0,54,699	0/0:14,0:14:42.14:0,42,545	0/0:10,0:10:11.52:0,12,121	0/0:5,0:5:2.79:0,3,75	0/0:30,0:30:90.29:0,90,1162	0/0:24,0:24:63.17:0,63,789	0/0:17,0:17:51.15:0,51,646	0/0:47,0:47:99:0,135,1749	0/0:13,0:13:39.13:0,39,505	1/1:2,22:24:66.22:979,66,0	1/1:0,17:17:48.16:719,48,0	0/0:11,0:11:30.10:0,30,387	0/0:15,0:15:45.15:0,45,584	0/0:16,0:16:48.14:0,48,608	1/1:1,16:17:39.13:584,39,0	0/0:19,0:19:54.16:0,54,685	0/0:23,0:23:69.18:0,69,863	0/0:13,0:13:36.12:0,36,467	1/1:1,6:7:21.07:305,21,0	1/1:2,29:31:87.29:1301,87,0	1/1:0,7:7:15.05:225,15,0	0/0:4,0:4:12.04:0,12,155	1/1:1,6:7:9.02:135,9,0	1/1:1,9:10:27.09:405,27,0	0/0:31,0:31:84.74:0,85,1089	0/0:25,0:25:75.24:0,75,973	0/0:20,0:19:57.18:0,57,733	0/0:9,0:9:27.09:0,27,351
chr10	9435707	.	T	TGCCTCTA	3040.70	PASS	AB=0.766;AC=10;AF=0.179;AN=56;BaseQRankSum=1.835;DP=670;FS=2.229;HRun=0;HaplotypeScore=171.1181;InbreedingCoeff=0.7129;MQ=82.56;MQ0=2;MQRankSum=-6.571;QD=24.72;ReadPosRankSum=0.301;VQSLOD=2.9736;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:42.14:0,42,816	0/0:11,0:11:21.07:0,21,466	0/0:34,0:33:54.17:0,54,1028	0/0:32,0:32:16.12:0,16,1307	0/0:9,0:9:27.09:0,27,606	0/0:23,0:23:45.15:0,45,1003	0/0:37,0:37:68.80:0,69,1380	0/0:34,0:34:33.08:0,33,608	0/0:28,0:28:60.21:0,60,1374	1/1:14,2:19:18.06:580,18,0	1/1:5,5:10:9.03:225,9,0	0/0:24,0:24:60.19:0,60,1325	0/0:33,0:33:69.22:0,69,1551	0/0:34,0:34:78.26:0,78,1723	1/1:11,24:35:45.13:1598,45,0	0/0:43,0:43:99:0,114,2513	0/0:23,0:23:54.19:0,54,1243	0/0:24,0:24:63.17:0,63,1405	0/0:17,0:17:19.30:0,19,417	0/0:11,0:11:18.06:0,18,366	0/0:41,0:40:50.78:0,51,1085	0/0:13,0:13:27.09:0,27,606	1/1:12,9:22:9.03:273,9,0	0/1:10,9:19:58.66:325,0,59	0/0:15,0:15:15.05:0,15,353	0/1:12,2:14:99:201,0,371	0/0:21,0:20:48.16:0,48,1041	0/0:12,0:12:36.10:0,36,707
chr10	9435798	.	AC	A	4431.86	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=13.652;DP=629;FS=1.296;HRun=2;HaplotypeScore=140.1325;InbreedingCoeff=0.9830;MQ=54.37;MQ0=27;MQRankSum=-11.788;QD=24.49;ReadPosRankSum=-3.941;VQSLOD=3.5530;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:34:82.77:0,83,1065	0/0:8,0:7:18.04:0,18,224	0/0:38,0:18:45.14:0,45,588	0/0:39,0:23:63.20:0,63,829	0/0:19,0:19:41.57:0,42,559	0/0:18,0:17:38.59:0,39,490	0/0:24,0:24:13.62:0,14,390	0/0:31,0:30:87.26:0,87,1145	0/0:15,0:15:37.69:0,38,384	1/1:2,21:21:63.20:801,63,0	1/1:2,13:14:30.08:354,30,0	0/0:29,0:28:59.25:0,59,769	0/0:15,0:15:27.03:0,27,317	0/0:17,0:18:42.07:0,42,526	1/1:5,26:30:84:941,84,0	0/0:36,0:34:65.07:0,65,654	0/0:21,1:21:23.58:0,24,581	0/0:10,0:9:20.52:0,21,230	1/1:5,11:14:36.12:459,36,0	1/1:1,23:22:44.73:546,45,0	1/1:11,7:12:23.61:260,24,0	0/0:25,0:24:48.13:0,48,611	1/1:1,27:28:66.45:781,66,0	1/1:7,19:23:26.84:291,27,0	0/0:25,0:24:26.58:0,27,275	0/0:12,1:12:27.48:0,27,348	0/0:19,0:18:48.07:0,48,608	0/0:6,0:3:9.01:0,9,99
chr10	9435799	.	C	CCA	728.75	PASS	AB=0.874;AC=23;AF=0.479;AN=48;BaseQRankSum=-3.787;DP=642;FS=2.936;HRun=0;HaplotypeScore=166.5023;InbreedingCoeff=-0.0709;MQ=51.59;MQ0=31;MQRankSum=3.623;QD=2.21;ReadPosRankSum=-1.472;VQSLOD=2.1321;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:36:4.65:0,5,19	0/1:8,1:8:25.95:38,0,26	./.	./.	./.	0/0:19,0:17:2.84:0,3,14	0/1:13,0:23:7.38:7,0,14	./.	0/1:10,5:16:20.43:120,0,20	1/1:24,0:23:0.45:1,0,0	0/1:14,0:13:6.16:6,0,8	0/1:23,6:30:36.64:37,0,54	1/1:11,5:16:5.91:88,6,0	0/1:17,1:18:13.95:157,0,14	0/0:33,0:30:22.52:0,23,115	0/0:18,0:31:22.64:0,23,109	1/1:20,2:22:10.16:198,10,0	0/0:9,0:9:2.84:0,3,14	1/1:13,0:13:2.92:18,3,0	0/1:26,0:25:8.70:16,0,9	0/1:14,0:12:0:0,0,0	0/1:18,7:24:25.90:38,0,26	1/1:29,0:29:0.32:16,0,0	0/0:24,0:24:2.14:0,2,19	0/0:9,0:24:6.46:0,6,23	1/1:13,0:12:5.99:51,6,0	0/1:16,3:18:25.96:38,0,26	0/1:5,1:3:25.87:38,0,26
chr10	9436567	.	C	CGT	1873.70	PASS	AC=14;AF=0.259;AN=54;BaseQRankSum=0.047;DP=513;FS=18.447;HRun=0;HaplotypeScore=147.5166;InbreedingCoeff=0.8530;MQ=49.71;MQ0=12;MQRankSum=0.350;QD=18.02;ReadPosRankSum=-2.674;VQSLOD=2.0633;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:21.06:0,21,286	0/0:6,0:6:15.05:0,15,218	0/0:24,0:9:12.07:0,12,273	0/0:24,0:12:35.85:0,36,438	0/0:20,0:20:9.03:0,9,133	0/0:26,0:24:36.12:0,36,492	0/0:11,0:11:24.08:0,24,337	0/0:29,0:27:57.01:0,57,730	0/0:22,0:22:46.01:0,46,597	1/1:14,0:14:2.81:428,3,0	1/1:21,0:21:23.79:360,24,0	0/0:21,0:21:48.15:0,48,689	0/0:22,0:22:27.03:0,27,329	0/0:20,0:20:6.51:0,7,495	1/1:12,0:11:3.01:37,3,0	0/0:23,0:23:31.33:0,31,383	0/0:21,0:21:38.12:0,38,480	0/0:5,0:5:9.03:0,9,106	1/1:15,0:15:24.03:284,24,0	1/1:9,0:9:14.81:202,15,0	1/1:14,0:14:21.03:327,21,0	0/0:22,0:22:33.07:0,33,449	1/1:19,0:18:32.95:414,33,0	0/0:4,9:12:0:0,0,0	0/0:13,0:13:27.09:0,27,367	0/0:29,0:29:74.26:0,74,1003	0/0:14,0:13:30.33:0,30,344	./.
chr10	9436568	.	GCACACACA	G	3008.96	PASS	AB=0.651;AC=23;AF=0.460;AN=50;BaseQRankSum=1.125;DP=517;FS=10.227;HRun=0;HaplotypeScore=178.2829;InbreedingCoeff=0.6010;MQ=48.13;MQ0=12;MQRankSum=0.106;QD=13.49;ReadPosRankSum=0.307;VQSLOD=1.8211;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:13,2:42:2.87:0,3,15	0/0:6,0:6:15.03:0,15,427	./.	0/0:24,0:12:12:0,12,239	0/1:7,11:21:0:0,0,0	1/1:17,2:24:21.07:528,21,0	1/1:9,1:12:6.02:148,6,0	1/1:10,19:27:48.75:742,49,0	0/0:24,0:24:30.56:0,31,705	0/1:8,5:14:47.59:496,0,48	1/1:11,8:21:2.99:24,3,0	0/0:21,0:21:36.10:0,36,954	0/0:20,0:20:27.09:0,27,709	0/0:21,0:20:30.10:0,30,928	./.	1/1:13,2:23:4.31:408,4,0	0/0:21,0:21:33.10:0,33,1044	1/1:5,0:6:7.84:155,8,0	0/1:7,0:15:11.42:147,0,11	1/1:5,0:9:3.01:62,3,0	0/0:13,0:13:0.47:0,0,1	0/0:22,0:22:15.05:0,15,422	1/1:14,5:18:6.02:143,6,0	1/1:11,2:13:2.80:13,3,0	1/1:9,1:14:13.30:314,13,0	0/0:29,0:29:72.08:0,72,1731	0/0:14,0:13:15.78:0,16,322	./.
chr10	9436591	.	C	CAGAG	1162.20	PASS	AB=1.000;AC=17;AF=0.315;AN=54;BaseQRankSum=4.749;DP=552;FS=0.550;HRun=0;HaplotypeScore=171.2085;InbreedingCoeff=-0.2785;MQ=43.64;MQ0=14;MQRankSum=0.535;QD=3.55;ReadPosRankSum=-0.727;VQSLOD=2.6399;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:2.85:0,3,121	0/1:11,0:11:66.97:67,0,129	0/0:12,0:2:3.01:0,3,49	0/0:18,0:5:11.59:0,12,100	0/0:26,0:25:24.06:0,24,299	0/1:27,0:25:11.92:20,0,12	0/0:13,0:13:7.66:0,8,67	0/1:42,0:40:13.02:13,0,383	1/1:21,4:26:26.35:387,26,0	0/0:17,0:17:30.03:0,30,309	0/0:18,0:18:2.99:0,3,24	0/1:32,0:32:9.64:10,0,300	0/1:27,0:27:99:130,0,124	0/1:21,0:19:77.70:78,0,304	0/1:21,0:20:37.63:53,0,38	0/1:21,0:21:22.83:23,0,83	0/1:22,0:22:19.95:20,0,271	0/0:10,0:10:1.21:0,1,66	0/1:13,0:12:24.97:25,0,115	0/0:13,0:12:1.41:0,1,4	./.	0/0:23,0:23:2.20:0,2,132	0/0:12,0:11:4.62:0,5,95	0/0:14,0:13:3.01:0,3,50	0/1:19,0:19:19.04:19,0,99	0/1:28,0:27:99:304,0,425	0/1:12,0:10:99:116,0,137	1/1:5,0:2:3.01:46,3,0
chr10	9436593	.	C	CAGAGAGAG	3226.07	PASS	AB=0.992;AC=30;AF=0.556;AN=54;BaseQRankSum=-0.950;DP=588;FS=16.864;HRun=0;HaplotypeScore=209.0975;InbreedingCoeff=0.0535;MQ=41.96;MQ0=14;MQRankSum=-3.011;QD=7.01;ReadPosRankSum=-1.075;VQSLOD=1.4273;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:47,0:47:6.24:6,0,117	1/1:11,0:11:9.01:108,9,0	0/0:10,0:2:3.01:0,3,66	0/0:18,0:4:6.02:0,6,106	0/0:26,0:25:24.08:0,24,444	1/1:28,0:26:3.15:15,3,0	0/1:14,0:14:47.46:56,0,47	0/1:48,0:46:14.06:173,0,14	1/1:28,0:28:27.53:339,28,0	0/1:16,0:16:8.52:9,0,333	0/0:18,0:18:2.93:0,3,47	1/1:17,0:37:2.75:76,3,0	1/1:11,14:27:11.97:268,12,0	0/1:20,1:20:31.40:219,0,31	0/1:23,0:22:50.04:121,0,50	0/1:21,0:21:31.15:31,0,66	1/1:13,4:23:9.38:223,9,0	0/1:10,0:10:3.78:4,0,33	1/1:19,0:18:21.03:388,21,0	1/1:19,0:18:5.43:62,5,0	./.	0/0:11,11:24:0.45:0,0,1	0/0:13,0:12:6.02:0,6,124	0/0:14,0:13:3.01:0,3,63	0/1:19,0:19:62.18:62,0,117	1/1:28,0:28:20.02:795,20,0	0/1:14,0:12:25.52:344,0,26	1/1:5,0:2:3.01:88,3,0
chr10	9436626	.	ATG	A	153.36	PASS	AB=0.982;AC=11;AF=0.204;AN=54;BaseQRankSum=4.999;DP=613;FS=18.534;HRun=0;HaplotypeScore=139.2250;InbreedingCoeff=-0.0830;MQ=41.90;MQ0=32;MQRankSum=-3.912;QD=0.87;ReadPosRankSum=-1.088;VQSLOD=1.5697;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:41,1:42:44.75:0,45,863	0/0:9,0:9:18.06:0,18,304	0/0:53,0:6:12.92:0,13,239	0/0:70,0:8:17.89:0,18,321	0/0:22,0:22:35.87:0,36,647	0/0:26,2:27:41.96:0,42,821	0/0:16,0:15:30.10:0,30,547	0/0:42,0:42:99:0,104,2050	0/1:24,0:24:39.74:40,0,508	0/1:13,0:13:22.49:22,0,142	0/1:16,0:15:36.53:37,0,46	0/0:31,0:31:26.79:0,27,394	0/1:17,0:18:15.68:16,0,228	0/0:19,0:17:10.15:0,10,372	0/1:20,1:21:1.45:1,0,63	0/0:23,0:23:35.92:0,36,663	0/0:13,0:13:15.42:0,15,236	0/0:11,0:11:19.66:0,20,329	0/1:13,0:12:9.13:9,0,192	1/1:12,3:15:5.16:25,5,0	./.	0/0:17,0:17:9.67:0,10,109	0/1:21,0:21:52.25:52,0,120	0/0:9,0:8:3.01:0,3,60	0/0:21,1:22:51.02:0,51,914	0/1:21,0:20:45.39:45,0,679	0/1:13,1:12:44.73:45,0,415	0/0:5,1:3:6.02:0,6,116
chr10	9436949	.	A	AT	2561.09	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-4.929;DP=465;FS=3.703;HRun=7;HaplotypeScore=46.2175;InbreedingCoeff=0.9742;MQ=84.21;MQ0=0;MQRankSum=-2.334;QD=26.96;ReadPosRankSum=0.044;VQSLOD=4.0410;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:81.03:0,81,760	0/0:5,0:5:15.02:0,15,145	0/0:22,0:22:38.17:0,38,388	0/0:9,0:8:17.98:0,18,157	0/0:19,0:19:48.04:0,48,451	0/0:27,0:27:78.11:0,78,747	0/0:23,0:23:63.08:0,63,602	0/0:29,0:29:63.08:0,63,603	0/0:17,0:17:48.06:0,48,458	1/1:1,19:20:57.16:677,57,0	1/1:1,8:9:21.06:253,21,0	0/0:23,0:23:60.07:0,60,569	0/0:16,0:16:48.07:0,48,458	0/0:15,0:15:42:0,42,382	1/1:2,12:14:7.13:370,7,0	0/0:22,0:22:63.07:0,63,597	0/0:16,0:16:42.06:0,42,405	0/0:13,0:12:36.04:0,36,341	1/1:0,11:11:30.09:362,30,0	1/1:0,9:9:27.05:310,27,0	1/1:1,8:9:12.04:145,12,0	0/0:10,0:10:23.98:0,24,222	1/1:0,8:8:21.06:248,21,0	1/1:3,12:15:33.10:399,33,0	0/0:23,0:23:60.09:0,60,579	0/0:22,0:22:63.09:0,63,605	0/0:22,0:21:63.10:0,63,608	0/0:9,0:9:27.04:0,27,261
chr10	9437169	.	T	TATATATATAC	2591.73	PASS	AB=1.000;AC=15;AF=0.278;AN=54;BaseQRankSum=-1.716;DP=337;FS=8.049;HRun=0;HaplotypeScore=98.8026;InbreedingCoeff=0.7729;MQ=63.77;MQ0=0;MQRankSum=-3.229;QD=43.20;ReadPosRankSum=-2.625;VQSLOD=2.2884;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:54.17:0,54,1462	0/0:7,0:7:15.05:0,15,482	0/0:9,0:8:17:0,17,249	0/1:5,0:5:2.94:11,0,3	0/0:20,0:19:57.18:0,57,1637	0/0:18,0:18:42.14:0,42,1300	0/0:16,0:16:42.14:0,42,1080	0/0:28,0:28:69.22:0,69,1720	0/0:2,0:2:3.01:0,3,38	1/1:1,9:13:21.05:715,21,0	1/1:1,6:10:9.03:466,9,0	0/0:13,0:13:33.11:0,33,919	0/0:10,0:10:30.10:0,30,865	0/0:6,0:6:15.05:0,15,441	1/1:5,1:6:3.01:156,3,0	0/0:8,0:8:24.08:0,24,624	0/0:22,0:22:54.13:0,54,1554	0/0:16,0:16:42.14:0,42,1245	1/1:4,6:12:33.09:1115,33,0	1/1:4,0:4:6.02:103,6,0	./.	0/0:5,0:5:15.05:0,15,433	1/1:0,1:5:3.01:156,3,0	1/1:5,0:5:3.01:40,3,0	0/0:15,0:15:39.13:0,39,1156	0/0:20,0:20:54.18:0,54,1230	0/0:19,0:19:54.03:0,54,1389	0/0:17,0:17:42.14:0,42,1301
chr10	9437241	.	CCTCT	C	2438.90	PASS	AB=0.903;AC=20;AF=0.400;AN=50;BaseQRankSum=-2.551;DP=431;FS=4.874;HRun=0;HaplotypeScore=111.0331;InbreedingCoeff=0.4734;MQ=50.19;MQ0=8;MQRankSum=1.015;QD=11.73;ReadPosRankSum=-0.614;VQSLOD=3.0011;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:25,5:30:24.12:289,24,0	0/0:3,0:4:3.01:0,3,49	./.	0/0:22,0:12:8.91:0,9,79	0/1:13,2:14:11.37:105,0,11	1/1:8,10:20:9.04:369,9,0	0/1:11,2:12:3.24:110,0,3	0/1:22,4:25:10.78:101,0,11	0/0:11,0:11:24.08:0,24,527	1/1:5,3:8:15.05:218,15,0	1/1:7,1:8:2.97:20,3,0	0/0:25,0:25:24.05:0,24,303	0/0:22,0:21:29.62:0,30,289	0/0:15,0:16:26.83:0,27,281	0/1:12,0:15:51.33:89,0,51	1/1:10,8:18:32.27:429,32,0	0/0:16,0:16:11.90:0,12,129	1/1:9,4:14:20.08:350,20,0	0/1:11,0:9:26.93:84,0,27	0/0:7,0:6:2.97:0,3,20	./.	0/0:11,0:9:8.49:0,8,100	./.	0/1:9,0:9:0.18:0,0,0	1/1:9,9:18:33.02:450,33,0	0/0:13,0:23:29.98:0,30,367	0/0:19,0:19:18.50:0,19,212	0/0:7,0:9:11.98:0,12,134
chr10	9437274	.	CTCTT	C	1075.84	PASS	AB=0.983;AC=14;AF=0.259;AN=54;BaseQRankSum=-0.204;DP=423;FS=19.674;HRun=0;HaplotypeScore=129.4616;InbreedingCoeff=-0.1065;MQ=51.11;MQ0=8;MQRankSum=2.303;QD=5.38;ReadPosRankSum=4.272;VQSLOD=0.8954;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:37,1:37:99:138,0,291	0/0:1,0:1:3.01:0,3,63	0/0:22,0:13:28.24:0,28,258	0/0:26,0:12:12.21:0,12,160	0/1:17,0:17:42.46:42,0,78	0/1:25,0:25:99:139,0,148	0/1:16,0:15:32.47:32,0,113	0/0:20,0:19:10.15:0,10,286	0/0:12,0:12:27.08:0,27,547	0/1:9,1:10:43.37:136,0,43	0/0:4,0:4:2.37:0,2,8	0/0:21,0:21:39.10:0,39,286	0/0:22,0:21:27.18:0,27,183	0/0:20,0:20:3.33:0,3,229	0/1:14,0:13:27.17:27,0,47	0/1:18,0:18:80.12:174,0,80	0/0:18,0:18:11.25:0,11,186	0/1:19,0:17:80.70:141,0,81	1/1:4,0:4:9.03:130,9,0	./.	1/1:10,1:11:0.47:1,0,0	0/1:10,0:8:9.98:10,0,39	0/0:5,0:5:2.60:0,3,10	0/0:13,0:13:0.31:0,0,1	0/1:17,1:18:47.45:248,0,47	0/0:18,0:18:25.61:0,26,333	0/0:11,0:10:14.42:0,14,103	0/0:8,0:7:10.81:0,11,160
chr10	9437289	.	T	TCGTG	425.62	PASS	AB=0.958;AC=12;AF=0.222;AN=54;BaseQRankSum=4.780;DP=394;FS=9.797;HRun=0;HaplotypeScore=140.0934;InbreedingCoeff=0.6288;MQ=52.56;MQ0=5;MQRankSum=-3.641;QD=6.35;ReadPosRankSum=-1.471;VQSLOD=1.9653;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:69.15:0,69,1351	0/0:3,0:2:3.01:0,3,60	0/0:27,0:16:40.64:0,41,667	0/0:28,0:15:26.75:0,27,533	0/0:12,0:12:24:0,24,405	0/0:26,0:26:48.16:0,48,941	0/0:16,0:16:27.09:0,27,524	0/0:19,0:19:51.17:0,51,944	0/0:8,0:8:21.07:0,21,358	1/1:4,2:6:3.32:139,3,0	1/1:0,1:1:3.01:74,3,0	0/0:21,0:21:29.90:0,30,582	0/0:17,0:16:32.75:0,33,475	0/0:18,0:17:16.43:0,16,272	1/1:10,1:10:8.87:113,9,0	0/0:15,0:15:39.13:0,39,762	0/0:16,0:16:26.92:0,27,408	0/0:17,0:16:33.03:0,33,697	0/1:10,1:11:99:164,0,147	./.	0/1:20,0:20:0.32:0,0,1	0/0:5,0:4:5.94:0,6,119	1/1:1,0:1:3.01:31,3,0	1/1:7,8:17:5.98:47,6,0	0/0:20,0:20:38.87:0,39,700	0/0:10,0:10:15.64:0,16,418	0/0:9,0:7:14.99:0,15,182	0/0:6,0:6:17.89:0,18,308
chr10	9437295	.	ACG	A	1014.02	PASS	AB=1.000;AC=29;AF=0.558;AN=52;BaseQRankSum=0.398;DP=406;FS=5.659;HRun=0;HaplotypeScore=115.7385;InbreedingCoeff=-0.1508;MQ=52.19;MQ0=8;MQRankSum=1.639;QD=3.10;ReadPosRankSum=1.780;VQSLOD=2.2138;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:35,0:35:94.92:113,0,95	0/1:4,0:2:7.43:7,0,8	0/0:26,0:15:34.62:0,35,253	0/0:32,0:14:15.95:0,16,189	0/1:13,0:11:21.84:22,0,49	0/1:27,0:27:87.55:88,0,97	0/1:19,0:19:36.06:56,0,36	0/1:19,0:18:54.35:54,0,173	0/0:8,0:8:1.56:0,2,77	0/1:5,0:6:8.85:9,0,10	0/0:1,0:1:1.82:0,2,5	0/1:18,0:18:49.02:53,0,49	1/1:16,0:15:16.26:104,16,0	1/1:20,0:19:14.53:71,15,0	0/0:10,0:11:4.55:0,5,26	0/1:16,0:16:51.47:51,0,64	0/1:18,0:18:23.50:27,0,23	0/1:19,0:16:43.13:43,0,51	1/1:13,0:12:28.49:177,28,0	./.	1/1:22,1:23:2.90:22,3,0	1/1:3,0:2:5.93:40,6,0	./.	1/1:15,2:18:5.99:52,6,0	0/1:16,0:16:46.57:60,0,47	0/1:10,0:10:15.36:15,0,60	1/1:9,0:7:5.16:36,5,0	1/1:4,1:5:6.88:71,7,0
chr10	9437297	.	GCA	G	3109.57	PASS	AB=0.814;AC=34;AF=0.680;AN=50;BaseQRankSum=-4.031;DP=408;FS=10.812;HRun=0;HaplotypeScore=108.3207;InbreedingCoeff=0.4730;MQ=51.91;MQ0=10;MQRankSum=4.006;QD=10.80;ReadPosRankSum=2.556;VQSLOD=3.0335;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:16,15:34:56.48:565,56,0	1/1:2,1:2:2.79:33,3,0	./.	0/0:35,0:14:2.20:0,2,10	1/1:9,3:11:14.71:131,15,0	1/1:13,13:27:20.99:312,21,0	1/1:4,11:18:21.06:238,21,0	1/1:11,7:18:21.04:226,21,0	0/1:5,0:6:8.19:8,0,35	0/0:6,0:6:10.54:0,11,77	0/0:1,0:1:2.96:0,3,19	0/1:9,9:18:18.95:245,0,19	1/1:9,7:15:20.86:204,21,0	1/1:8,9:18:20.89:218,21,0	0/0:12,0:12:5.71:0,6,43	1/1:9,7:16:18.05:204,18,0	1/1:9,7:17:14.46:144,14,0	0/1:12,7:16:4.21:195,0,4	0/0:14,0:12:5.13:0,5,20	./.	0/0:23,0:23:10.49:0,10,70	1/1:1,2:2:6.02:68,6,0	./.	0/1:18,0:18:0.96:1,0,20	1/1:7,8:15:21.06:239,21,0	1/1:9,2:11:1.77:64,2,0	1/1:7,1:7:5.85:48,6,0	1/1:2,4:6:12.01:125,12,0
chr10	9437572	.	TGC	T	646.85	PASS	AB=0.955;AC=35;AF=0.729;AN=48;BaseQRankSum=-3.015;DP=260;FS=6.629;HRun=0;HaplotypeScore=44.6348;InbreedingCoeff=0.1598;MQ=37.50;MQ0=24;MQRankSum=1.040;QD=2.84;ReadPosRankSum=-1.232;VQSLOD=0.5628;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:4.76:0,5,23	0/1:2,0:2:0:0,0,0	1/1:20,0:1:1.25:3,1,0	0/1:27,0:5:3.41:3,0,12	0/1:6,0:5:0:1,0,0	1/1:12,0:11:5.99:49,6,0	1/1:19,0:17:2.96:25,3,0	0/1:7,2:6:3.60:28,0,4	0/1:16,0:15:0:0,0,0	./.	./.	0/1:15,0:15:0.76:47,0,1	1/1:9,0:8:11.77:75,12,0	0/0:11,0:10:4.63:0,5,18	1/1:5,0:5:2.80:13,3,0	0/1:12,0:10:0.02:1,0,0	1/1:14,0:13:4.75:86,5,0	1/1:4,0:2:5.89:37,6,0	0/1:5,2:5:7.43:37,0,7	0/1:7,0:7:6.64:48,0,7	1/1:17,0:17:16.59:136,17,0	1/1:8,0:5:3:25,3,0	./.	1/1:7,0:6:2.91:19,3,0	./.	1/1:3,0:3:8.91:65,9,0	1/1:8,0:8:0.94:42,1,0	1/1:1,0:1:2.92:17,3,0
chr10	9438933	.	TG	T	5808.33	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=10.576;DP=673;FS=1.429;HRun=5;HaplotypeScore=65.5544;InbreedingCoeff=0.9995;MQ=89.41;MQ0=0;MQRankSum=-3.674;QD=31.57;ReadPosRankSum=-0.506;VQSLOD=5.2103;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,102,1395	0/0:12,0:12:36.12:0,36,489	0/0:27,0:27:72.16:0,72,897	0/0:23,0:23:69.21:0,69,902	0/0:24,0:24:69.23:0,69,943	0/0:18,0:18:51.16:0,51,682	0/0:20,0:20:57.18:0,57,761	0/0:35,0:35:90.29:0,90,1217	0/0:19,0:19:54.18:0,54,731	1/1:1,28:29:87.25:985,87,0	1/1:2,20:22:60.17:680,60,0	0/0:35,0:35:99:0,102,1376	0/0:33,0:33:90.30:0,90,1228	0/0:28,0:28:81.27:0,81,1108	1/1:2,25:27:66.19:749,66,0	0/0:24,0:24:72.23:0,72,966	0/0:33,0:33:96.31:0,96,1298	0/0:11,0:11:33.07:0,33,430	1/1:0,11:11:33.09:374,33,0	1/1:0,27:27:78.21:877,78,0	1/1:3,32:35:90.26:1020,90,0	0/0:32,0:32:96.26:0,96,1288	1/1:0,11:11:33.09:374,33,0	1/1:0,22:22:66.19:749,66,0	0/0:22,0:21:63.21:0,63,861	0/0:33,2:35:28.23:0,28,1163	0/0:12,0:12:33.11:0,33,451	0/0:9,0:9:27.09:0,27,369
chr10	9439420	.	GAGAT	G	1778.66	PASS	AB=1.000;AC=19;AF=0.500;AN=38;BaseQRankSum=-0.147;DP=469;FS=0.000;HRun=0;HaplotypeScore=121.3130;InbreedingCoeff=0.8462;MQ=72.22;MQ0=4;MQRankSum=3.198;QD=11.94;ReadPosRankSum=2.367;VQSLOD=3.2609;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:27:15.02:0,15,249	1/1:8,7:15:12.04:186,12,0	./.	./.	0/0:28,0:28:12.02:0,12,188	0/0:27,0:25:27.04:0,27,400	./.	0/0:34,0:33:23.72:0,24,158	0/1:13,0:13:0.30:0,0,56	./.	./.	1/1:8,7:15:18.06:279,18,0	1/1:8,8:16:21.07:325,21,0	1/1:3,7:10:12.04:186,12,0	./.	0/0:12,0:12:12.01:0,12,151	0/0:15,0:28:18.04:0,18,269	0/0:11,0:11:18.02:0,18,276	./.	./.	./.	1/1:13,14:27:21.07:325,21,0	1/1:11,0:11:6.01:55,6,0	1/1:10,0:10:3:28,3,0	0/0:23,0:23:20.99:0,21,248	0/0:18,0:18:36.12:0,36,806	1/1:11,12:23:24.08:372,24,0	1/1:2,6:9:12.03:186,12,0
chr10	9439464	.	T	TGATAGAG	916.79	PASS	AB=0.859;AC=15;AF=0.278;AN=54;BaseQRankSum=4.599;DP=498;FS=10.010;HRun=0;HaplotypeScore=150.2683;InbreedingCoeff=-0.1896;MQ=69.70;MQ0=7;MQRankSum=3.701;QD=3.77;ReadPosRankSum=-4.363;VQSLOD=0.3310;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:6,0:26:60.55:61,0,107	0/0:10,0:10:21.06:0,21,403	0/0:29,0:18:12.31:0,12,822	0/1:18,0:9:1.99:2,0,238	0/1:4,1:34:8.35:221,0,8	0/1:5,0:22:99:103,0,128	0/1:11,0:11:13.08:13,0,49	0/0:44,0:42:86.01:0,86,956	0/0:4,0:7:12.04:0,12,205	0/1:11,0:10:32.93:33,0,97	0/1:13,0:13:24.38:24,0,31	0/0:17,0:17:48.12:0,48,924	0/0:11,0:11:27.09:0,27,535	0/0:17,0:17:42.07:0,42,711	0/0:6,0:6:2.84:0,3,14	1/1:0,0:17:6.02:167,6,0	0/0:23,0:23:33.82:0,34,539	0/1:17,0:17:9.74:10,0,252	0/1:9,0:9:27.15:27,0,102	0/1:20,0:20:21.39:79,0,21	./.	0/0:22,0:22:44.99:0,45,797	0/1:12,0:12:44.47:44,0,59	0/1:7,0:7:16.84:44,0,17	0/1:1,1:24:10.89:239,0,11	0/0:27,0:27:81.27:0,81,2001	0/0:23,0:23:57.14:0,57,1103	0/0:12,0:11:24.08:0,24,511
chr10	9439638	.	CT	C	2194.27	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.721;DP=483;FS=7.854;HRun=2;HaplotypeScore=52.4367;InbreedingCoeff=0.9382;MQ=78.00;MQ0=0;MQRankSum=-2.967;QD=34.29;ReadPosRankSum=2.072;VQSLOD=3.5078;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:48.16:0,48,716	0/0:10,0:10:30.09:0,30,431	0/0:14,0:14:25.94:0,26,481	0/0:9,0:9:22.59:0,23,276	0/0:17,0:17:51.16:0,51,743	0/0:19,0:19:57.18:0,57,833	0/0:14,0:14:42.13:0,42,610	0/0:38,0:38:99:0,108,1590	0/0:18,0:18:54.18:0,54,806	0/0:14,0:14:42.14:0,42,612	0/0:26,0:26:78.26:0,78,1169	0/0:14,0:14:42.13:0,42,609	0/0:21,0:21:63.20:0,63,925	0/0:16,0:16:48.15:0,48,699	0/0:9,0:9:24.06:0,24,321	0/0:29,0:29:87.29:0,87,1286	0/0:11,0:11:33.11:0,33,492	0/0:12,0:12:36.12:0,36,539	1/1:0,18:18:54.18:701,54,0	1/1:1,27:28:75.24:973,75,0	1/1:0,18:18:51.17:662,51,0	0/0:18,0:18:54.16:0,54,771	0/0:11,0:11:33.11:0,33,494	0/0:19,0:19:57.19:0,57,854	0/0:13,0:13:39.13:0,39,585	0/0:17,0:17:51.17:0,51,749	0/0:33,0:33:99:0,99,1423	0/0:1,0:1:3.01:0,3,45
chr10	9440465	.	ATT	A	1942.33	PASS	AB=0.850;AC=15;AF=0.268;AN=56;BaseQRankSum=-1.699;DP=592;FS=13.334;HRun=4;HaplotypeScore=97.1782;InbreedingCoeff=0.7124;MQ=69.54;MQ0=14;MQRankSum=1.555;QD=10.56;ReadPosRankSum=1.101;VQSLOD=-0.3501;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:25:31.44:0,31,426	0/0:6,0:6:17.89:0,18,179	0/0:22,0:16:19.10:0,19,403	0/0:26,0:18:37.06:0,37,433	0/0:27,0:27:62.94:0,63,559	0/0:31,0:31:78.97:0,79,662	0/0:17,0:17:38.99:0,39,357	0/0:31,0:31:90.07:0,90,842	0/0:16,0:16:33:0,33,302	0/1:34,0:34:19.37:591,0,19	1/1:17,0:16:8.24:234,8,0	0/0:22,0:21:51.44:0,51,441	0/0:18,0:17:47.96:0,48,360	0/0:21,0:21:53.17:0,53,426	1/1:19,0:19:21.72:268,22,0	0/0:23,0:23:38.97:0,39,354	0/0:21,0:18:41.12:0,41,348	0/1:12,0:12:2.29:2,0,134	1/1:5,9:14:15.36:211,15,0	0/1:5,22:26:39.31:47,0,39	1/1:25,0:25:36.94:421,37,0	0/0:28,0:28:54.25:0,54,557	1/1:17,0:16:19.03:189,19,0	1/1:19,0:19:5.23:161,5,0	0/0:23,0:23:56.76:0,57,519	0/0:22,0:21:59.73:0,60,609	0/0:19,0:17:45.50:0,45,428	0/0:9,0:9:26.95:0,27,228
chr10	9440468	.	T	TTCTC	4888.75	PASS	AB=1.000;AC=51;AF=0.944;AN=54;BaseQRankSum=-1.808;DP=694;FS=13.520;HRun=0;HaplotypeScore=173.3641;InbreedingCoeff=0.0140;MQ=65.42;MQ0=14;MQRankSum=0.205;QD=7.27;ReadPosRankSum=0.033;VQSLOD=3.3222;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:31,0:30:20.95:388,21,0	1/1:12,0:12:8.99:133,9,0	./.	0/1:26,0:18:0:0,0,0	1/1:27,0:27:3.01:70,3,0	1/1:35,0:35:32.88:569,33,0	1/1:10,5:22:3.01:70,3,0	1/1:39,0:39:15.46:171,15,0	1/1:15,5:22:2.89:70,3,0	1/1:43,0:43:29.63:339,30,0	1/1:17,0:16:6.01:75,6,0	1/1:28,0:27:20.66:364,21,0	1/1:26,0:25:17.14:293,17,0	1/1:23,0:23:11.67:158,12,0	1/1:21,0:21:5.93:119,6,0	1/1:15,11:28:3.01:70,3,0	1/1:21,0:18:9.01:113,9,0	1/1:11,0:11:9.03:196,9,0	1/1:15,0:15:4.83:68,5,0	0/1:33,0:32:13.70:14,0,58	0/1:26,0:26:25.54:67,0,26	1/1:30,0:30:12.04:223,12,0	1/1:20,0:19:15.52:227,16,0	1/1:23,0:24:14.71:234,15,0	1/1:25,0:25:9:146,9,0	1/1:31,0:28:30.25:454,30,0	1/1:24,0:22:15.07:161,15,0	1/1:11,0:11:6.02:97,6,0
chr10	9441650	.	T	TTC	4735.83	PASS	AB=0.719;AC=36;AF=0.667;AN=54;BaseQRankSum=-2.935;DP=789;FS=0.551;HRun=0;HaplotypeScore=187.6627;InbreedingCoeff=0.1901;MQ=64.58;MQ0=11;MQRankSum=-1.053;QD=7.75;ReadPosRankSum=-1.233;VQSLOD=3.8913;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:36,0:37:3:26,3,0	0/1:4,1:5:37.31:37,0,60	0/0:47,0:25:8.47:0,8,97	0/0:50,0:24:5.61:0,6,62	1/1:38,0:38:2.35:12,2,0	1/1:38,0:34:3:27,3,0	1/1:31,0:31:14.65:136,15,0	1/1:36,0:34:29.98:231,30,0	1/1:24,0:23:14.99:146,15,0	1/1:37,0:36:48.57:428,49,0	1/1:21,0:23:8.48:68,8,0	0/1:16,11:28:83.98:291,0,84	1/1:9,13:22:42.14:634,42,0	0/1:12,11:23:26.18:500,0,26	1/1:29,0:29:3:26,3,0	1/1:29,0:27:17.97:150,18,0	0/1:8,19:31:35.29:679,0,35	./.	0/0:22,0:25:28.94:0,29,263	0/0:21,1:24:1.46:0,1,427	0/0:23,0:24:41.78:0,42,440	0/1:6,11:18:60.82:205,0,61	1/1:38,0:38:7.06:53,7,0	0/1:17,0:18:0:0,0,0	1/1:32,0:36:5.93:52,6,0	0/1:18,12:30:57.85:461,0,58	0/1:8,14:23:18.37:341,0,18	1/1:5,6:11:15.05:232,15,0
chr10	9442760	.	C	CTG	33322.87	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=1.611;DP=657;FS=0.582;HRun=0;HaplotypeScore=141.1709;InbreedingCoeff=0.9426;MQ=85.20;MQ0=0;MQRankSum=-11.048;QD=54.63;ReadPosRankSum=6.702;VQSLOD=4.5744;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,28:29:78.27:1582,78,0	1/1:0,3:3:9.03:183,9,0	0/0:30,0:30:84.27:0,84,1312	0/0:17,0:16:48.06:0,48,746	1/1:1,29:31:72.25:1458,72,0	1/1:0,24:26:66.23:1339,66,0	1/1:0,22:22:57.20:1154,57,0	1/1:0,37:38:99:2144,111,0	1/1:0,22:22:60.21:1217,60,0	1/1:0,29:29:87.30:1767,87,0	1/1:0,22:23:60.21:1215,60,0	1/1:0,26:26:75.26:1520,75,0	1/1:0,24:25:72.25:1457,72,0	1/1:0,20:20:51.18:1033,51,0	1/1:1,33:36:81.28:1643,81,0	1/1:1,19:20:51.18:1034,51,0	1/1:0,19:19:57.20:1154,57,0	1/1:0,9:9:27.09:548,27,0	1/1:0,28:29:84.27:1669,84,0	1/1:0,29:29:75.26:1523,75,0	1/1:0,21:21:54.19:1096,54,0	1/1:1,24:25:72.25:1459,72,0	1/1:0,19:19:57.20:1155,57,0	1/1:0,18:19:45.15:911,45,0	1/1:0,25:25:72.25:1461,72,0	1/1:1,30:32:93.26:1777,93,0	1/1:0,29:29:81.28:1642,81,0	1/1:1,3:4:9.03:182,9,0
chr10	9442881	.	AG	A	2318.75	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.126;DP=710;FS=9.735;HRun=5;HaplotypeScore=68.3680;InbreedingCoeff=0.9997;MQ=85.25;MQ0=0;MQRankSum=-1.390;QD=28.63;ReadPosRankSum=-0.141;VQSLOD=3.5029;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,111,1501	0/0:16,0:16:45.15:0,45,615	0/0:22,0:22:57.18:0,57,767	0/0:26,0:27:63.16:0,63,827	0/0:31,0:31:87.29:0,87,1187	0/0:29,0:29:87.28:0,87,1175	0/0:23,0:23:69.23:0,69,943	0/0:50,0:50:99:0,132,1777	0/0:25,0:25:72.20:0,72,948	0/0:23,0:23:69.22:0,69,932	0/0:25,0:25:72.20:0,72,948	0/0:20,0:20:57.18:0,57,764	0/0:25,0:25:66.21:0,66,886	0/0:21,0:21:57.18:0,57,754	0/0:34,0:34:93.31:0,93,1271	0/0:22,0:22:60.20:0,60,821	0/0:23,0:23:69.22:0,69,927	0/0:10,0:10:30.08:0,30,392	1/1:3,26:29:78.18:862,78,0	1/1:1,29:30:81.23:919,81,0	1/1:0,22:22:60.17:681,60,0	0/0:22,0:22:63.21:0,63,861	0/0:25,0:25:72.24:0,72,982	0/0:19,0:19:42.14:0,42,574	0/0:28,0:28:84.28:0,84,1149	0/0:24,0:24:69.21:0,69,912	0/0:33,0:33:87.28:0,87,1174	0/0:14,0:14:33.11:0,33,451
chr10	9444157	.	AT	A	4765.63	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-16.795;DP=635;FS=3.941;HRun=8;HaplotypeScore=102.3198;InbreedingCoeff=0.9921;MQ=72.72;MQ0=0;MQRankSum=0.609;QD=24.07;ReadPosRankSum=3.848;VQSLOD=5.0160;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:63.19:0,63,761	1/1:1,9:10:20.79:203,21,0	0/0:10,0:10:11.35:0,11,172	0/0:11,0:10:24.07:0,24,288	0/0:33,0:33:78.71:0,79,942	0/0:28,0:28:81.25:0,81,978	0/0:16,0:16:45.14:0,45,544	0/0:33,0:33:72.21:0,72,850	0/0:23,0:23:66.20:0,66,797	0/0:6,0:22:48.85:0,49,268	0/0:2,0:20:57.76:0,58,340	1/1:1,30:31:84.13:811,84,0	1/1:3,22:25:57.08:550,57,0	1/1:2,22:24:54.08:522,54,0	0/0:3,0:28:63.38:0,63,335	0/0:23,0:23:60.14:0,60,706	1/1:2,19:21:54.08:521,54,0	0/0:29,1:30:55.21:0,55,908	0/0:14,0:14:39.11:0,39,457	0/0:26,0:26:75.23:0,75,906	0/0:26,0:26:75.20:0,75,881	1/1:1,18:19:48.07:464,48,0	0/0:3,0:33:86.55:0,87,461	0/0:1,0:15:40.22:0,40,205	0/0:25,0:25:75.21:0,75,892	1/1:3,24:28:60.36:681,60,0	1/1:3,30:33:87.14:840,87,0	1/1:1,6:7:18.03:174,18,0
chr10	9445826	.	AC	A	9265.46	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=4.290;DP=690;FS=3.446;HRun=1;HaplotypeScore=89.0001;InbreedingCoeff=0.9993;MQ=80.13;MQ0=0;MQRankSum=-7.186;QD=38.45;ReadPosRankSum=0.170;VQSLOD=5.1655;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,42:42:99:1678,120,0	0/0:17,0:17:48.16:0,48,767	0/0:17,0:16:48.03:0,48,733	0/0:30,0:30:32.83:0,33,947	1/1:0,28:28:72.21:986,72,0	1/1:0,14:14:39.13:545,39,0	1/1:0,30:30:81.27:1133,81,0	1/1:0,38:38:99:1525,114,0	1/1:0,17:17:45.15:629,45,0	0/0:30,0:30:90.28:0,90,1393	0/0:21,0:21:63.12:0,63,951	0/0:27,0:27:81.24:0,81,1244	0/0:25,0:25:75.23:0,75,1171	0/0:25,0:25:72.25:0,72,1151	0/0:29,0:29:87.30:0,87,1386	1/1:0,32:32:87.29:1217,87,0	0/0:28,0:28:84.26:0,84,1316	1/1:0,20:20:57.19:797,57,0	0/0:20,0:20:60.19:0,60,932	0/0:35,0:35:93.30:0,93,1461	0/0:20,0:20:60.17:0,60,912	0/0:16,0:16:45.14:0,45,697	0/0:18,0:18:51.17:0,51,815	0/0:33,0:33:99:0,99,1557	1/1:0,20:20:54.18:755,54,0	0/0:19,0:19:54.18:0,54,863	0/0:31,0:31:93.32:0,93,1482	0/0:7,0:7:21.07:0,21,335
chr10	9450508	.	C	CAGAG	1308.08	PASS	AB=1.000;AC=30;AF=0.682;AN=44;BaseQRankSum=-2.893;DP=435;FS=15.097;HRun=0;HaplotypeScore=108.3840;InbreedingCoeff=-0.0271;MQ=66.54;MQ0=12;MQRankSum=0.740;QD=4.42;ReadPosRankSum=-0.919;VQSLOD=1.2918;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:22:14.53:100,15,0	1/1:6,0:5:2.91:25,3,0	./.	./.	./.	./.	0/1:22,0:20:12.82:139,0,13	1/1:32,0:32:30.66:195,31,0	0/1:10,0:10:15.44:111,0,15	1/1:13,0:13:4.72:32,5,0	1/1:4,0:4:2.68:11,3,0	1/1:13,0:13:2.09:61,2,0	1/1:18,0:17:11.03:106,11,0	1/1:14,5:19:3.01:67,3,0	0/0:15,0:15:9:0,9,87	0/1:16,0:14:58.19:79,0,58	0/0:17,0:16:0.89:0,1,2	0/1:10,0:10:21.22:21,0,25	0/1:20,0:20:23:35,0,23	./.	1/1:9,0:9:3.01:31,3,0	./.	0/0:7,0:7:3.01:0,3,33	0/1:22,0:22:0.98:1,0,69	0/1:11,0:11:7.28:17,0,7	1/1:21,0:21:24.44:253,24,0	1/1:18,0:17:11.47:122,11,0	0/1:9,0:9:19.90:32,0,20
chr10	9450548	.	GAC	G	1554.33	PASS	AB=0.924;AC=27;AF=0.540;AN=50;BaseQRankSum=2.983;DP=480;FS=16.775;HRun=0;HaplotypeScore=112.4438;InbreedingCoeff=-0.0267;MQ=46.56;MQ0=27;MQRankSum=-0.498;QD=4.35;ReadPosRankSum=0.650;VQSLOD=1.7231;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:22:12.58:247,13,0	0/1:6,0:5:16.34:16,0,29	./.	./.	1/1:21,0:21:2.94:18,3,0	./.	0/1:26,1:23:10.02:114,0,10	0/1:49,0:46:99:146,0,174	1/1:9,2:11:10.26:119,10,0	1/1:18,0:18:38.70:341,39,0	0/0:11,0:11:0.47:0,0,1	0/0:10,3:13:17.57:0,18,155	0/1:15,1:15:49.77:50,0,137	0/1:7,2:9:17.95:20,0,18	0/1:13,0:13:1.33:8,0,1	0/0:17,1:15:3.90:0,4,74	0/0:14,9:21:1.53:0,2,202	0/1:14,0:14:8.30:41,0,8	1/1:19,2:18:25.33:244,25,0	1/1:13,0:13:5.72:29,6,0	1/1:10,0:7:5.37:24,5,0	0/0:18,2:20:26.99:0,27,279	0/0:12,0:11:0.39:0,0,1	1/1:20,1:20:8.79:44,9,0	0/1:14,0:14:5.74:18,0,6	0/1:16,10:26:99:149,0,363	0/1:11,7:17:27.31:27,0,145	0/1:24,0:21:46.58:47,0,217
chr10	9450550	.	C	CAG	1175.21	PASS	AB=0.859;AC=17;AF=0.354;AN=48;BaseQRankSum=-0.523;DP=474;FS=1.389;HRun=0;HaplotypeScore=118.4377;InbreedingCoeff=0.2739;MQ=46.83;MQ0=26;MQRankSum=-1.655;QD=5.09;ReadPosRankSum=-0.350;VQSLOD=3.0652;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:25,1:22:36:494,36,0	0/0:6,0:5:5.74:0,6,40	./.	./.	1/1:2,18:20:2.70:35,3,0	./.	0/1:14,12:22:15.60:48,0,16	0/1:49,0:46:99:208,0,231	0/1:5,6:11:7.45:78,0,7	0/1:16,0:18:6.18:35,0,6	./.	0/0:13,0:13:17.44:0,17,121	0/0:18,0:17:7.29:0,7,157	0/0:8,0:8:4.53:0,5,25	0/0:4,0:13:8.81:0,9,58	0/0:9,7:14:9.44:0,9,84	0/0:23,0:21:30.20:0,30,211	0/1:7,6:13:36.96:80,0,37	1/1:18,0:17:1.83:238,2,0	1/1:7,0:13:6.01:63,6,0	1/1:9,0:6:2.89:26,3,0	0/0:19,0:19:26.78:0,27,187	0/1:12,0:11:0.62:1,0,1	0/0:21,0:21:5.97:0,6,44	0/1:14,0:14:3.81:18,0,4	0/0:26,0:26:35.14:0,35,304	0/0:19,0:18:22.93:0,23,164	0/0:24,0:21:20.38:0,20,263
chr10	9450554	.	G	GAC	696.63	PASS	AB=0.942;AC=13;AF=0.260;AN=50;BaseQRankSum=2.331;DP=470;FS=4.219;HRun=0;HaplotypeScore=118.3101;InbreedingCoeff=-0.0329;MQ=47.29;MQ0=25;MQRankSum=-2.948;QD=3.65;ReadPosRankSum=2.101;VQSLOD=2.6296;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:21:10.66:190,0,11	0/0:5,0:4:6.02:0,6,85	./.	./.	0/1:21,0:21:11.41:11,0,18	./.	0/1:24,0:20:15.15:15,0,109	0/0:47,0:45:2.13:0,2,855	0/1:12,0:12:22.13:34,0,22	0/1:18,0:18:6.92:7,0,239	0/0:12,0:12:2.51:0,3,7	0/0:13,0:13:17.91:0,18,248	0/0:18,0:17:33.92:0,34,395	0/0:8,0:8:9.01:0,9,97	0/0:13,0:13:8.72:0,9,59	0/0:17,0:14:13.22:0,13,147	0/0:22,0:20:32.98:0,33,445	0/1:14,0:14:30.27:30,0,99	0/1:14,6:17:99:365,0,102	1/1:12,1:13:6.02:100,6,0	0/1:6,3:6:7.82:47,0,8	0/0:19,0:19:27.09:0,27,386	1/1:13,0:12:2.48:25,2,0	0/1:21,1:21:12.87:13,0,95	0/0:14,0:14:6.48:0,6,59	0/0:25,0:25:65.34:0,65,787	0/0:18,0:17:18.13:0,18,321	0/0:24,0:21:45.76:0,46,608
chr10	9450558	.	CAG	C	1105.46	PASS	AB=0.985;AC=17;AF=0.315;AN=54;BaseQRankSum=3.743;DP=451;FS=7.961;HRun=0;HaplotypeScore=105.0874;InbreedingCoeff=0.4513;MQ=49.18;MQ0=22;MQRankSum=-1.079;QD=6.58;ReadPosRankSum=3.396;VQSLOD=2.7215;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:19:35.46:0,35,501	0/0:5,0:4:6.02:0,6,84	0/0:4,0:3:5.98:0,6,69	0/1:1,0:1:0:0,0,0	0/0:20,0:21:5.54:0,6,88	./.	0/1:20,0:17:3.16:3,0,25	0/0:38,0:36:78.10:0,78,920	0/0:12,0:12:0.80:0,1,76	1/1:3,13:16:42.72:521,43,0	1/1:3,8:11:5.95:58,6,0	0/0:14,0:14:20.68:0,21,297	0/0:17,0:16:30.83:0,31,401	0/0:8,0:8:8.45:0,8,74	0/1:11,1:12:14.99:36,0,15	0/0:16,0:15:14.69:0,15,181	0/1:21,0:20:9.66:10,0,442	0/0:14,0:15:24.46:0,24,274	1/1:15,4:17:41.81:440,42,0	1/1:2,10:12:6.02:66,6,0	1/1:9,1:7:1.55:32,2,0	0/0:18,0:18:27.09:0,27,424	0/0:1,12:12:0.30:0,0,1	1/1:8,13:20:8.96:82,9,0	0/0:5,0:13:6.01:0,6,74	0/1:24,0:24:20.43:20,0,663	0/0:17,0:16:29.11:0,29,361	0/0:24,0:22:38.82:0,39,578
chr10	9450566	.	CAG	C	53.32	PASS	AB=0.916;AC=5;AF=0.089;AN=56;BaseQRankSum=2.879;DP=429;FS=8.308;HRun=0;HaplotypeScore=102.3093;InbreedingCoeff=0.1213;MQ=51.93;MQ0=21;MQRankSum=-3.180;QD=0.87;ReadPosRankSum=-1.089;VQSLOD=1.2261;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:19:35.79:0,36,576	0/0:5,0:4:6.02:0,6,107	0/0:6,0:4:0.06:0,0,139	0/0:5,0:5:11.96:0,12,172	0/0:20,0:20:8.51:0,9,126	0/0:24,0:23:3.01:0,3,47	0/0:17,0:13:9.02:0,9,119	0/0:30,0:27:33.33:0,33,608	0/0:10,0:10:8.64:0,9,101	0/0:16,0:16:7.51:0,8,97	0/1:9,1:10:3.75:4,0,13	0/0:13,0:13:20.70:0,21,372	0/0:16,0:15:30.02:0,30,495	0/0:8,0:8:11.96:0,12,170	0/1:11,1:12:18.94:35,0,19	0/0:16,0:14:14.62:0,15,222	0/0:21,0:20:31.76:0,32,572	0/0:14,1:15:20.54:0,21,347	0/1:20,2:21:40.62:41,0,188	0/0:11,0:11:8.08:0,8,57	0/0:10,0:7:5.87:0,6,37	0/0:18,0:18:27.09:0,27,479	0/0:13,0:12:0.30:0,0,1	1/1:15,2:16:1.57:76,2,0	0/0:11,0:11:3.01:0,3,51	0/0:21,0:21:54.41:0,54,843	0/0:16,0:15:29.13:0,29,442	0/0:24,0:22:41.50:0,42,813
chr10	9453549	.	C	CCCCTCTCTCTCT	7655.02	PASS	AB=0.990;AC=28;AF=0.500;AN=56;BaseQRankSum=9.535;DP=765;FS=4.660;HRun=0;HaplotypeScore=271.9805;InbreedingCoeff=-0.5618;MQ=61.92;MQ0=16;MQRankSum=-9.156;QD=12.67;ReadPosRankSum=-1.716;VQSLOD=2.8178;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:27:23.52:0,24,177	0/1:13,0:13:58.02:150,0,58	0/0:62,0:28:54.66:0,55,585	0/0:69,0:20:36.23:0,36,365	0/1:29,0:25:99:134,0,228	0/1:23,0:20:99:117,0,183	0/1:26,0:23:46.91:47,0,130	0/1:29,0:27:99:234,0,383	0/1:33,0:33:99:289,0,229	0/1:30,0:30:99:938,0,176	0/1:18,0:18:34.84:228,0,35	0/1:28,0:28:99:549,0,168	0/1:30,0:30:99:497,0,127	0/1:33,0:33:99:308,0,205	0/1:35,0:34:99:311,0,228	0/1:17,0:24:21.70:22,0,166	0/1:10,0:10:77.99:83,0,78	0/1:4,0:4:33.92:84,0,34	1/1:11,0:18:52.46:761,52,0	1/1:25,0:20:39.03:501,39,0	1/1:4,1:15:3.01:126,3,0	0/1:32,0:30:75.62:76,0,151	0/1:18,0:17:50.42:50,0,178	0/1:28,0:28:0.60:371,0,1	0/1:31,0:30:61.75:62,0,167	0/1:23,0:23:99:767,0,126	0/1:27,0:27:73.41:492,0,73	0/1:15,0:15:59.19:456,0,59
chr10	9453578	.	CTGTGTGTGTGTGTGTGTGTG	C	1297.47	PASS	AB=0.820;AC=12;AF=0.240;AN=50;BaseQRankSum=4.938;DP=645;FS=26.586;HRun=0;HaplotypeScore=258.4416;InbreedingCoeff=-0.0400;MQ=36.21;MQ0=24;MQRankSum=-3.607;QD=6.03;ReadPosRankSum=-0.699;VQSLOD=0.9061;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:23:3.01:0,3,238	0/1:7,1:10:11.61:68,0,12	./.	./.	0/0:21,0:17:9.50:0,10,792	0/1:20,0:17:0.74:1,0,268	0/0:32,0:29:22.94:0,23,1437	0/0:28,0:25:29.86:0,30,1024	0/0:32,0:32:23.18:0,23,1484	0/1:18,0:26:63.25:63,0,597	0/0:14,0:23:3.32:0,3,27	0/1:20,3:24:58.15:66,0,58	0/1:18,5:29:99:530,0,115	1/1:15,5:27:6.02:192,6,0	0/0:23,0:28:12.79:0,13,194	0/0:23,0:23:24.08:0,24,1937	0/1:9,0:9:92.22:92,0,97	0/0:11,0:9:11.97:0,12,611	0/0:22,0:18:35.92:0,36,1284	0/0:21,0:16:21.07:0,21,1482	./.	1/1:19,2:24:0.89:2,1,0	0/0:10,0:13:9.47:0,9,158	0/0:26,0:26:8.77:0,9,212	0/0:29,0:35:5.89:0,6,515	0/1:13,3:19:43.13:387,0,43	0/1:18,1:23:28.89:29,0,140	0/0:12,0:12:5.75:0,6,54
chr10	9454925	.	CATAG	C	3551.86	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=3.124;DP=551;FS=5.317;HRun=0;HaplotypeScore=104.9485;InbreedingCoeff=0.9681;MQ=68.62;MQ0=0;MQRankSum=-1.075;QD=43.85;ReadPosRankSum=1.102;VQSLOD=4.0821;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:60.21:0,60,1491	0/0:8,0:8:24.08:0,24,623	0/0:13,0:13:36.12:0,36,875	0/0:4,0:4:8.92:0,9,172	0/0:19,0:19:51.17:0,51,1291	0/0:19,0:19:57.18:0,57,1427	0/0:10,0:10:30.10:0,30,773	0/0:49,0:49:99:0,129,3091	0/0:21,0:21:48.16:0,48,1246	1/1:1,26:27:78.25:1346,78,0	1/1:1,15:16:36.12:643,36,0	0/0:19,0:19:57.20:0,57,1481	0/0:20,0:20:48.16:0,48,1207	0/0:18,0:18:48.16:0,48,1206	1/1:1,16:17:45.15:809,45,0	0/0:24,0:24:72.25:0,72,1780	0/0:20,0:20:57.16:0,57,1423	0/0:28,0:28:72.17:0,72,1750	0/0:23,0:23:63.22:0,63,1635	0/0:23,0:23:63.22:0,63,1581	0/0:13,0:13:39.13:0,39,1013	0/0:5,0:5:15.05:0,15,389	1/1:0,15:15:30.10:539,30,0	1/1:0,6:6:12.04:216,12,0	0/0:26,0:26:75.26:0,75,1937	0/0:25,1:26:12.29:0,12,1476	0/0:27,0:26:81.28:0,81,2069	0/0:30,0:30:90.31:0,90,2231
chr10	9456224	.	GT	G	12424.04	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-6.641;DP=631;FS=0.744;HRun=9;HaplotypeScore=113.0449;InbreedingCoeff=0.9284;MQ=73.13;MQ0=3;MQRankSum=-2.989;QD=22.71;ReadPosRankSum=5.678;VQSLOD=4.0315;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,17:17:48.03:439,48,0	1/1:0,7:7:21.01:192,21,0	0/0:41,0:21:16.65:0,17,299	0/0:42,0:23:26.74:0,27,232	1/1:2,30:32:87.04:794,87,0	1/1:1,25:26:69.04:632,69,0	1/1:0,9:9:24.01:220,24,0	1/1:4,27:31:80.99:726,81,0	1/1:0,7:7:18.01:165,18,0	1/1:3,22:25:66.03:603,66,0	1/1:3,26:29:37.45:597,37,0	1/1:0,17:17:48.03:439,48,0	1/1:2,24:26:57.03:522,57,0	1/1:2,12:14:39.02:356,39,0	1/1:2,20:22:60.03:549,60,0	1/1:0,18:18:47.85:439,48,0	1/1:4,21:25:57:515,57,0	1/1:4,21:25:29.98:442,30,0	1/1:7,15:22:44.71:411,45,0	1/1:4,30:34:90.02:823,90,0	1/1:2,8:10:5.54:198,6,0	1/1:2,19:21:51.02:466,51,0	1/1:2,25:27:75.04:686,75,0	1/1:1,14:15:33.02:302,33,0	1/1:2,26:28:72.03:659,72,0	1/1:4,20:24:28.39:509,28,0	1/1:3,20:23:60.02:549,60,0	1/1:4,9:13:21:192,21,0
chr10	9457195	.	C	CTG	11699.89	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-6.695;DP=575;FS=3.529;HRun=0;HaplotypeScore=90.5464;InbreedingCoeff=0.9932;MQ=75.73;MQ0=3;MQRankSum=-0.176;QD=37.74;ReadPosRankSum=6.110;VQSLOD=7.1237;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:45.09:0,45,551	1/1:1,10:11:27.09:479,27,0	0/0:36,0:34:63.11:0,63,831	0/0:26,0:23:38.02:0,38,404	0/0:26,0:26:65.76:0,66,837	0/0:32,0:32:93.28:0,93,1240	0/0:15,0:15:39.10:0,39,503	0/0:37,0:37:99:0,99,1342	0/0:18,0:18:39.06:0,39,511	1/1:0,17:18:48.15:852,48,0	1/1:4,17:21:42.13:715,42,0	1/1:5,6:9:21.07:355,21,0	1/1:4,20:24:51.12:867,51,0	1/1:2,28:29:63.22:1107,63,0	1/1:1,21:22:54.19:958,54,0	0/0:18,0:18:45.12:0,45,585	1/1:3,18:20:42.14:740,42,0	0/0:13,0:13:25.59:0,26,374	1/1:3,20:23:57.13:887,57,0	1/1:4,19:23:42.14:745,42,0	1/1:2,9:11:15.05:266,15,0	1/1:2,12:14:30.10:532,30,0	1/1:3,5:8:21.06:339,21,0	1/1:3,11:13:20.90:371,21,0	0/0:26,0:26:63.01:0,63,773	1/1:4,23:26:72.20:1192,72,0	1/1:1,24:24:60.04:1061,60,0	1/1:1,6:7:15.02:234,15,0
chr10	9457739	.	TG	T	4127.47	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=9.731;DP=703;FS=12.069;HRun=3;HaplotypeScore=72.0923;InbreedingCoeff=0.9999;MQ=85.23;MQ0=0;MQRankSum=-1.524;QD=32.76;ReadPosRankSum=1.607;VQSLOD=3.2464;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:75.25:0,75,1074	0/0:12,0:12:36.11:0,36,494	0/0:20,0:20:57.18:0,57,787	0/0:29,0:29:75.23:0,75,1022	0/0:35,0:35:99:0,99,1401	0/0:27,0:26:75.24:0,75,1061	0/0:21,0:21:63.21:0,63,899	0/0:37,0:37:99:0,105,1439	0/0:27,0:26:78.20:0,78,1075	1/1:2,30:32:90.28:1115,90,0	1/1:0,25:25:69.17:838,69,0	0/0:25,0:25:72.19:0,72,1007	0/0:31,0:31:90.15:0,90,1213	0/0:31,0:31:87.28:0,87,1225	1/1:0,29:29:78.25:966,78,0	0/0:31,0:31:90.30:0,90,1294	0/0:22,0:22:63.19:0,63,888	0/0:11,0:11:33.11:0,33,471	0/0:25,0:25:63.19:0,63,870	0/0:23,0:23:66.21:0,66,931	0/0:32,0:32:90.21:0,90,1230	0/0:17,0:17:48.05:0,48,628	1/1:2,21:23:51.07:615,51,0	1/1:0,17:17:48.15:594,48,0	0/0:22,0:22:66.21:0,66,925	0/0:33,1:34:65.25:0,65,1387	0/0:25,0:25:72.24:0,72,1035	0/0:15,0:15:45.15:0,45,647
chr10	9457871	.	TG	T	3186.69	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=1.742;DP=635;FS=3.384;HRun=9;HaplotypeScore=168.7466;InbreedingCoeff=0.9806;MQ=66.67;MQ0=3;MQRankSum=-0.277;QD=16.51;ReadPosRankSum=1.761;VQSLOD=2.2062;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,1:30:57.06:0,57,625	0/0:5,0:5:9.03:0,9,104	0/0:20,0:18:21.97:0,22,187	0/0:22,0:19:21.85:0,22,161	0/0:35,0:35:53.86:0,54,553	0/0:21,0:21:51.02:0,51,555	0/0:33,0:33:74.89:0,75,757	0/0:20,0:22:42.07:0,42,456	0/0:30,0:30:44.21:0,44,572	1/1:8,20:29:60.02:548,60,0	1/1:3,19:22:41.90:376,42,0	0/0:29,0:29:50.85:0,51,565	0/0:19,0:19:45.09:0,45,501	0/0:29,0:29:49.63:0,50,494	1/1:4,24:28:50.94:458,51,0	0/0:31,0:30:78.12:0,78,864	0/0:10,0:10:21.06:0,21,241	0/0:6,0:6:15.04:0,15,173	1/1:2,13:15:39.01:353,39,0	1/1:8,23:32:64.90:562,65,0	1/1:2,22:24:44.90:403,45,0	0/0:28,1:29:38.26:0,38,592	1/1:2,17:19:38.89:338,39,0	1/1:5,19:24:39:357,39,0	0/0:19,0:19:30.02:0,30,328	0/0:28,1:29:32.68:0,33,612	0/0:14,0:14:33.02:0,33,352	0/0:8,0:8:12.04:0,12,138
chr10	9457918	.	TCACACACACACACACACACACA	T	10797.13	PASS	AB=0.627;AC=45;AF=0.833;AN=54;BaseQRankSum=-0.710;DP=296;FS=9.636;HRun=0;HaplotypeScore=167.1752;InbreedingCoeff=0.0749;MQ=40.62;MQ0=13;MQRankSum=1.831;QD=44.62;ReadPosRankSum=2.504;VQSLOD=3.6352;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,9:10:3.01:163,3,0	1/1:1,0:3:2.99:82,3,0	0/0:20,0:4:12.04:0,12,540	0/0:23,0:2:3.01:0,3,184	1/1:7,4:15:21.03:502,21,0	1/1:5,2:7:15.51:731,16,0	1/1:0,11:15:12.93:721,13,0	1/1:1,5:6:15.05:384,15,0	0/1:7,1:14:12.08:746,0,12	1/1:4,3:7:21.07:1037,21,0	1/1:2,5:11:3.01:51,3,0	1/1:2,7:12:11.97:465,12,0	1/1:0,9:15:24.06:812,24,0	0/1:6,9:22:81.10:351,0,81	1/1:2,5:14:15.52:693,16,0	0/1:10,4:16:32.08:1057,0,32	1/1:0,1:1:3.01:185,3,0	1/1:2,0:4:11.67:328,12,0	1/1:1,2:3:9.01:393,9,0	1/1:2,6:10:3:25,3,0	1/1:6,1:8:0.97:21,1,0	./.	1/1:1,3:8:9.01:273,9,0	1/1:5,1:10:5.82:193,6,0	1/1:0,3:6:3.01:145,3,0	1/1:4,2:8:24.08:855,24,0	0/1:2,0:7:81.02:238,0,81	0/1:2,4:6:41.35:346,0,41
chr10	9459113	.	C	CT	6918.37	PASS	AB=0.578;AC=17;AF=0.304;AN=56;BaseQRankSum=-12.937;DP=797;FS=0.311;HRun=5;HaplotypeScore=87.1020;InbreedingCoeff=0.9515;MQ=72.76;MQ0=0;MQRankSum=-0.999;QD=30.89;ReadPosRankSum=5.231;VQSLOD=4.9645;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:57:99:0,159,1617	1/1:0,15:15:42.14:552,42,0	0/0:42,0:39:75.29:0,75,784	0/0:38,0:33:42.42:0,42,604	0/0:22,0:22:45.09:0,45,474	0/0:27,0:27:72.15:0,72,757	0/0:15,0:15:45.10:0,45,475	0/0:36,0:36:93.20:0,93,973	0/0:29,0:29:81.18:0,81,861	0/0:35,0:35:84.10:0,84,884	0/0:19,0:19:48.06:0,48,494	1/1:3,27:30:69.22:898,69,0	1/1:5,29:34:81.26:1063,81,0	1/1:4,24:28:72.23:939,72,0	0/0:33,0:33:78.19:0,78,838	0/0:38,0:38:99:0,102,1078	1/1:4,29:33:79.50:1024,79,0	0/0:22,0:22:60.15:0,60,643	0/0:17,0:17:26.11:0,26,391	0/0:24,0:24:60.15:0,60,644	0/0:26,0:26:69.15:0,69,728	1/1:3,23:26:63.20:829,63,0	0/0:24,0:24:69.11:0,69,718	0/0:47,0:47:99:0,135,1371	0/0:21,0:21:57.13:0,57,605	0/1:7,19:26:1.26:668,0,1	1/1:1,19:20:51.17:671,51,0	1/1:0,12:12:21.07:276,21,0
chr10	9459448	.	T	TTGTGTG	3507.05	PASS	AB=0.906;AC=21;AF=0.375;AN=56;BaseQRankSum=-4.620;DP=716;FS=3.667;HRun=0;HaplotypeScore=205.1259;InbreedingCoeff=0.4297;MQ=63.84;MQ0=9;MQRankSum=-5.068;QD=8.72;ReadPosRankSum=-6.042;VQSLOD=1.0678;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:37:0.47:1,0,0	0/0:10,0:10:18.06:0,18,344	0/1:36,0:24:25.16:25,0,54	0/0:26,0:15:5.91:0,6,76	0/1:10,7:18:0.02:1,0,0	1/1:29,0:30:30.89:614,31,0	1/1:34,0:31:12.21:198,12,0	1/1:36,0:36:53.91:887,54,0	1/1:25,1:29:27.09:646,27,0	0/0:24,0:27:43.46:0,43,763	0/0:9,0:11:17.65:0,18,243	0/0:23,0:23:3.01:0,3,47	0/1:24,0:24:99:101,0,349	0/0:25,0:27:48.16:0,48,878	0/0:19,0:23:32.69:0,33,702	0/1:24,13:34:6.55:190,0,7	0/0:30,0:32:27.70:0,28,604	1/1:10,6:15:8.56:168,9,0	1/1:14,0:14:3.68:131,4,0	0/1:25,0:24:12.12:33,0,12	0/1:40,0:40:0.07:26,0,0	0/0:20,0:23:36.12:0,36,656	0/0:21,0:23:20.87:0,21,405	0/0:25,0:28:54.17:0,54,988	0/1:21,2:22:31.51:487,0,32	0/0:27,0:29:1.05:0,1,423	0/0:20,0:24:38.34:0,38,648	0/0:4,0:5:9.03:0,9,157
chr10	9459449	.	T	TGTGTGTGT	3995.48	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=-5.469;DP=720;FS=3.679;HRun=0;HaplotypeScore=224.3590;InbreedingCoeff=0.3117;MQ=62.93;MQ0=11;MQRankSum=-5.907;QD=10.01;ReadPosRankSum=-5.759;VQSLOD=0.8488;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:38,0:37:0.47:1,0,0	0/0:10,0:10:18.06:0,18,429	0/1:35,0:23:25.53:26,0,59	0/0:26,0:15:5.91:0,6,79	1/1:17,0:17:0.94:1,1,0	1/1:32,0:31:30.89:692,31,0	1/1:25,8:31:12.62:277,13,0	1/1:34,0:34:53.91:1031,54,0	1/1:28,0:28:27.56:818,28,0	0/0:28,0:26:43.46:0,43,939	0/0:11,0:11:17.69:0,18,285	0/0:23,0:23:3.01:0,3,61	0/1:24,0:24:15.65:16,0,456	0/0:28,0:27:48.16:0,48,1066	0/0:26,0:26:41.59:0,42,889	0/1:38,0:34:21.38:267,0,21	0/0:34,0:34:30.73:0,31,806	1/1:16,0:15:8.68:147,9,0	0/1:14,0:14:24.07:65,0,24	0/1:25,0:24:19.30:19,0,31	0/1:39,0:39:16.34:25,0,16	0/0:24,0:24:36.12:0,36,806	0/0:22,0:22:20.91:0,21,503	0/0:32,0:31:54.18:0,54,1196	0/1:25,0:24:47.58:611,0,48	0/0:30,0:29:1.05:0,1,523	0/0:23,0:23:38.02:0,38,807	0/0:4,0:4:9.03:0,9,201
chr10	9459456	.	G	GTGTA	853.26	PASS	AB=1.000;AC=10;AF=0.179;AN=56;BaseQRankSum=0.614;DP=751;FS=29.489;HRun=0;HaplotypeScore=202.3434;InbreedingCoeff=0.1251;MQ=54.54;MQ0=12;MQRankSum=-1.698;QD=3.99;ReadPosRankSum=1.432;VQSLOD=1.1265;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:39:8.42:0,8,62	0/0:11,0:11:24.05:0,24,349	0/0:30,0:18:24.38:0,24,322	0/0:21,0:10:26.97:0,27,288	0/0:17,0:17:5.95:0,6,48	0/1:35,0:34:99:160,0,183	0/0:34,0:31:19.25:0,19,159	0/1:30,0:30:87.04:87,0,362	0/1:28,0:28:56.89:131,0,57	0/0:31,0:29:77.63:0,78,960	0/0:16,0:16:29.48:0,29,343	0/0:23,0:23:20.97:0,21,183	0/0:30,0:30:30.45:0,30,428	0/0:32,0:29:56.69:0,57,846	0/0:37,0:37:70.24:0,70,912	0/0:36,0:32:4.83:0,5,105	0/0:35,0:35:71.62:0,72,825	0/1:14,0:13:18.59:19,0,59	1/1:5,11:17:0.95:311,1,0	1/1:27,0:26:7.90:99,8,0	0/1:38,0:38:20.81:55,0,21	0/0:24,0:24:45.10:0,45,641	0/0:26,0:25:49.39:0,49,560	0/0:36,0:35:83.94:0,84,1109	0/1:25,0:24:80.07:134,0,80	0/0:32,0:31:88.67:0,89,840	0/0:22,0:22:50.11:0,50,625	0/0:4,0:4:12.03:0,12,167
chr10	9459458	.	G	GTA	358.84	PASS	AB=0.697;AC=3;AF=0.054;AN=56;BaseQRankSum=-0.317;DP=757;FS=13.349;HRun=0;HaplotypeScore=183.4972;InbreedingCoeff=0.0353;MQ=51.31;MQ0=12;MQRankSum=-2.319;QD=4.17;ReadPosRankSum=-1.296;VQSLOD=1.6049;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:39:8.64:0,9,64	0/0:12,0:12:24:0,24,257	0/0:27,0:15:31.73:0,32,334	0/0:20,0:9:26.97:0,27,270	0/0:16,0:16:5.98:0,6,48	0/0:35,0:34:29.22:0,29,237	0/0:34,0:31:22.19:0,22,176	0/0:30,0:30:53.32:0,53,435	0/0:30,0:30:10.73:0,11,89	0/0:32,0:30:84.73:0,85,762	0/0:16,0:16:32.68:0,33,319	0/0:23,0:23:20.96:0,21,170	0/0:28,0:28:45.98:0,46,377	0/0:33,0:30:53.73:0,54,564	0/0:37,0:37:72.61:0,73,764	0/0:37,0:33:22.94:0,23,153	0/0:36,0:36:63.51:0,64,603	0/0:15,0:14:5.04:0,5,71	0/1:16,1:17:27.47:309,0,27	0/1:9,19:28:5.99:84,0,6	0/1:8,30:40:34.09:65,0,34	0/0:25,0:25:45.06:0,45,453	0/0:26,0:25:53.97:0,54,484	0/0:36,0:35:82.04:0,82,843	0/0:24,0:23:13.83:0,14,97	0/0:32,0:31:91.87:0,92,743	0/0:22,0:22:49.06:0,49,449	0/0:5,0:5:14.88:0,15,138
chr10	9459471	.	T	TGAGA	856.46	PASS	AB=0.950;AC=18;AF=0.321;AN=56;BaseQRankSum=2.562;DP=717;FS=7.071;HRun=0;HaplotypeScore=191.3032;InbreedingCoeff=-0.2736;MQ=48.06;MQ0=14;MQRankSum=-0.076;QD=2.07;ReadPosRankSum=-0.698;VQSLOD=2.0200;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:38,0:36:5.67:72,6,0	0/1:12,0:12:9.03:9,0,54	0/0:20,0:8:17.36:0,17,232	0/0:15,0:5:14.98:0,15,210	0/0:14,0:14:3:0,3,25	0/1:29,0:28:7.26:7,0,112	0/0:33,0:30:4.96:0,5,175	0/0:30,0:30:53.81:0,54,708	0/0:31,0:31:4.68:0,5,81	0/1:33,0:31:99:120,0,342	0/0:21,0:21:0.50:0,0,253	1/1:7,0:19:1.72:5,2,0	0/1:13,1:25:31.13:145,0,31	0/0:31,0:28:13.38:0,13,105	0/1:40,0:40:16.26:16,0,324	0/1:34,0:30:27.64:28,0,95	0/1:22,0:35:56.31:56,0,182	0/1:11,0:11:21.20:21,0,107	0/0:14,0:14:18.44:0,18,419	0/0:32,0:31:17.33:0,17,159	0/0:37,0:36:18.54:0,19,96	0/1:24,0:24:32.53:33,0,40	0/1:27,0:26:57.40:57,0,187	0/1:34,0:34:46.25:46,0,244	0/0:24,0:23:10.58:0,11,141	0/1:27,0:26:99:303,0,166	0/1:19,0:19:9.74:10,0,152	0/1:5,0:5:26.75:80,0,27
chr10	9459477	.	T	TGAGAGAGA	6351.65	PASS	AB=0.989;AC=46;AF=0.885;AN=52;BaseQRankSum=-1.727;DP=717;FS=0.000;HRun=0;HaplotypeScore=218.3763;InbreedingCoeff=-0.0894;MQ=47.03;MQ0=12;MQRankSum=-1.202;QD=9.14;ReadPosRankSum=-1.970;VQSLOD=3.5188;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:32,2:35:12.04:311,12,0	1/1:12,0:12:10.22:76,10,0	./.	./.	1/1:18,0:18:1.34:4,1,0	1/1:21,2:28:3.45:25,3,0	1/1:30,0:27:13.92:267,14,0	1/1:32,0:31:16.29:284,16,0	1/1:22,8:34:0.41:1,0,0	0/1:30,0:28:54:396,0,54	0/1:23,0:23:99:195,0,121	1/1:25,0:25:10.06:167,10,0	1/1:23,0:23:17.32:288,17,0	1/1:31,0:28:7.41:91,7,0	0/1:40,0:40:73.58:254,0,74	1/1:34,0:31:21.18:628,21,0	1/1:34,0:34:3.14:425,3,0	1/1:13,0:12:11.88:252,12,0	0/1:13,0:14:74.39:107,0,74	1/1:29,0:29:13.96:76,14,0	1/1:35,0:35:22.16:275,22,0	1/1:28,0:28:19.67:281,20,0	0/1:26,0:25:99:210,0,126	0/1:39,0:38:99:355,0,132	1/1:27,0:27:6.07:79,6,0	1/1:24,0:23:30.10:915,30,0	1/1:19,0:19:11.38:156,11,0	1/1:5,0:5:11.81:234,12,0
chr10	9462015	.	CACACACACACACACACAT	C	3608.45	PASS	AB=0.994;AC=18;AF=0.333;AN=54;BaseQRankSum=-1.861;DP=589;FS=6.420;HRun=0;HaplotypeScore=216.6917;InbreedingCoeff=0.3370;MQ=60.82;MQ0=19;MQRankSum=-2.715;QD=15.23;ReadPosRankSum=1.694;VQSLOD=1.9437;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:29:9.02:167,9,0	0/0:7,0:7:12.04:0,12,571	0/0:45,0:23:1.15:0,1,300	0/0:48,0:25:10.04:0,10,327	1/1:22,0:21:6.49:121,6,0	0/1:27,1:27:1.69:862,0,2	1/1:21,0:21:26.97:367,27,0	0/1:17,0:16:48.17:129,0,48	1/1:4,20:24:15.05:703,15,0	0/1:17,0:17:59.81:60,0,560	./.	0/0:17,0:17:17.93:0,18,1084	0/1:13,0:12:19.84:20,0,1041	0/0:20,0:20:15.05:0,15,753	0/0:28,0:28:18.06:0,18,816	1/1:26,1:27:18.06:585,18,0	0/0:24,0:24:2.80:0,3,2211	0/1:8,0:7:99:116,0,262	0/1:16,0:15:50.26:50,0,796	0/0:26,0:26:2.19:0,2,2295	0/0:25,0:24:6:0,6,284	0/0:11,0:11:24.08:0,24,1160	0/0:20,0:20:1.72:0,2,143	0/0:24,0:24:9.14:0,9,1207	1/1:14,1:15:23.30:430,23,0	0/0:25,0:24:26.43:0,26,1956	0/0:13,0:13:9.97:0,10,548	0/0:7,0:7:3.01:0,3,182
chr10	9462017	.	CACACACACACACACAT	C	4740.90	PASS	AB=0.982;AC=23;AF=0.426;AN=54;BaseQRankSum=-5.530;DP=600;FS=14.639;HRun=0;HaplotypeScore=200.0983;InbreedingCoeff=0.3545;MQ=60.01;MQ0=19;MQRankSum=-4.185;QD=14.19;ReadPosRankSum=1.014;VQSLOD=3.0154;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:7,22:29:9.03:304,9,0	0/0:8,0:8:15.05:0,15,566	0/1:45,0:23:14.90:15,0,228	0/0:47,0:24:10.04:0,10,249	1/1:4,18:21:6.49:212,6,0	1/1:8,20:27:25.77:1162,26,0	1/1:17,3:20:26.97:504,27,0	1/1:17,0:16:32.86:285,33,0	1/1:24,0:24:15.05:554,15,0	0/1:21,0:21:83.99:84,0,770	./.	0/0:19,0:19:17.93:0,18,928	0/1:12,0:11:19.84:20,0,873	0/0:20,0:20:15.05:0,15,623	0/0:27,0:27:18.06:0,18,647	1/1:7,20:27:18.06:779,18,0	0/1:25,0:25:19.75:20,0,1822	0/1:6,1:6:99:127,0,198	0/1:15,0:14:75.28:75,0,620	0/1:27,0:27:18.72:19,0,2006	0/0:25,0:24:6.02:0,6,236	0/0:16,0:16:30.10:0,30,1124	0/0:18,0:19:1.72:0,2,116	0/0:24,0:24:9.14:0,9,949	1/1:13,2:15:30.01:582,30,0	0/0:28,0:27:34.46:0,34,1707	0/0:13,0:13:9.97:0,10,469	0/0:9,0:9:3.01:0,3,156
chr10	9462029	.	CACAT	C	5707.60	PASS	AB=0.987;AC=51;AF=0.911;AN=56;BaseQRankSum=-0.061;DP=611;FS=10.374;HRun=0;HaplotypeScore=117.6353;InbreedingCoeff=0.1097;MQ=53.30;MQ0=23;MQRankSum=1.494;QD=9.34;ReadPosRankSum=0.133;VQSLOD=3.5911;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:25:8.87:66,9,0	1/1:7,1:8:18.85:177,19,0	0/1:38,0:15:11.85:12,0,64	0/1:42,0:18:1.53:2,0,86	1/1:20,0:18:5.91:47,6,0	1/1:24,0:23:29.99:291,30,0	1/1:22,0:21:32.79:252,33,0	1/1:17,0:16:44.70:349,45,0	1/1:23,0:23:14.98:140,15,0	1/1:29,0:29:80.76:681,81,0	1/1:6,7:13:11.95:94,12,0	1/1:21,0:21:0.85:4,1,0	1/1:12,1:11:8.17:212,8,0	1/1:17,1:18:6.92:94,7,0	1/1:3,26:29:18.06:318,18,0	1/1:23,0:23:18.03:179,18,0	0/1:27,2:29:5.26:402,0,5	0/1:8,0:7:25.83:98,0,26	1/1:18,0:17:30.02:301,30,0	0/1:25,0:25:41.89:284,0,42	1/1:28,0:26:3.45:23,3,0	1/1:14,1:14:27.09:252,27,0	1/1:1,19:20:2.55:56,3,0	1/1:16,6:22:36.04:507,36,0	1/1:21,0:20:41.98:368,42,0	1/1:6,23:28:58.92:494,59,0	1/1:17,0:17:1.20:3,1,0	1/1:12,0:12:0.47:1,0,0
chr10	9462031	.	CAT	C	6317.90	PASS	AB=1.000;AC=53;AF=0.946;AN=56;BaseQRankSum=0.536;DP=602;FS=5.809;HRun=0;HaplotypeScore=103.3070;InbreedingCoeff=0.1411;MQ=53.29;MQ0=23;MQRankSum=2.763;QD=10.49;ReadPosRankSum=1.661;VQSLOD=3.8728;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:24:8.79:52,9,0	1/1:8,0:8:20.96:188,21,0	0/1:34,0:13:11.85:12,0,64	0/1:39,0:17:1.53:2,0,85	1/1:20,0:18:5.83:33,6,0	1/1:24,0:23:29.24:171,29,0	1/1:22,0:21:32.65:237,33,0	1/1:18,0:17:47.62:367,48,0	1/1:22,0:22:14.60:82,15,0	1/1:20,9:29:80.75:681,81,0	1/1:13,0:12:11.95:94,12,0	1/1:1,20:21:18.06:268,18,0	1/1:11,2:11:29.81:245,30,0	1/1:2,15:17:15:180,15,0	1/1:27,0:27:17.81:143,18,0	1/1:23,0:23:17.55:102,18,0	1/1:25,5:30:41.83:640,42,0	0/1:10,0:9:0.65:103,0,1	1/1:17,0:16:44.86:363,45,0	1/1:24,1:25:49.72:549,50,0	1/1:4,24:26:5.96:67,6,0	1/1:14,1:14:32.95:288,33,0	1/1:20,0:20:2.52:24,3,0	1/1:22,0:22:38.91:314,39,0	1/1:25,0:23:47.74:375,48,0	1/1:26,2:27:66.27:557,66,0	1/1:0,15:15:9.03:136,9,0	1/1:0,12:12:3.01:45,3,0
chr10	9462313	.	ATTTG	A	4004.96	PASS	AB=0.934;AC=12;AF=0.214;AN=56;BaseQRankSum=5.440;DP=624;FS=11.671;HRun=0;HaplotypeScore=151.2836;InbreedingCoeff=0.7897;MQ=76.37;MQ0=0;MQRankSum=-9.088;QD=28.40;ReadPosRankSum=0.812;VQSLOD=2.8533;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:54.19:0,54,1335	0/0:10,0:10:27.09:0,27,676	0/0:29,0:29:62.70:0,63,1378	0/0:21,0:21:48.10:0,48,1034	0/0:34,0:34:90.27:0,90,2202	0/0:30,0:30:78.22:0,78,1861	0/0:26,0:26:57.20:0,57,1431	0/0:19,0:19:51.18:0,51,1255	0/0:15,0:15:45.15:0,45,1120	1/1:4,26:30:78.24:1300,78,0	1/1:5,12:17:36.12:615,36,0	0/0:18,0:18:39.13:0,39,970	0/0:27,0:27:78.27:0,78,1939	0/0:28,0:28:72.23:0,72,1727	1/1:5,18:23:51.17:873,51,0	0/0:27,0:27:72.23:0,72,1739	0/0:25,0:25:66.23:0,66,1656	0/0:13,0:13:33.11:0,33,787	0/1:16,1:17:15.40:15,0,771	0/0:30,0:30:81.28:0,81,1975	0/0:19,0:18:48.16:0,48,1198	0/0:17,0:17:48.16:0,48,1209	1/1:7,20:27:51.17:875,51,0	1/1:2,13:15:18.06:309,18,0	0/0:17,0:17:42.14:0,42,1050	0/0:36,1:37:42.26:0,42,2136	0/0:20,0:20:54.19:0,54,1327	0/1:11,1:12:18.37:18,0,721
chr10	9464860	.	GAAGGAGGAT	G	1528.75	PASS	AB=0.884;AC=12;AF=0.214;AN=56;BaseQRankSum=5.210;DP=356;FS=4.769;HRun=0;HaplotypeScore=203.4987;InbreedingCoeff=0.0434;MQ=56.93;MQ0=4;MQRankSum=-5.916;QD=13.07;ReadPosRankSum=3.059;VQSLOD=2.3823;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:35.95:0,36,581	1/1:4,2:6:17.98:224,18,0	0/0:15,0:14:38.31:0,38,813	0/0:15,0:8:21.04:0,21,614	0/0:12,0:12:23.59:0,24,606	0/0:9,0:9:24.05:0,24,634	0/0:18,0:18:50.91:0,51,968	0/0:16,0:16:35.43:0,35,517	0/0:19,0:19:52.63:0,53,1595	0/1:15,0:15:46.59:47,0,1255	0/1:14,0:14:22.26:22,0,679	0/1:5,3:8:31.93:158,0,32	0/1:6,3:9:23.36:272,0,23	0/1:11,2:14:5.74:411,0,6	0/0:17,0:17:51.05:0,51,1427	0/0:17,0:17:51.09:0,51,1520	0/1:5,0:5:10.13:145,0,10	0/0:12,0:10:12.86:0,13,759	0/0:9,0:8:21.05:0,21,721	0/0:21,0:21:54.11:0,54,1775	0/0:11,0:11:29.85:0,30,789	0/1:6,0:6:6.73:110,0,7	0/1:25,0:25:1.31:1,0,1546	0/0:20,0:20:42.02:0,42,1073	0/0:13,0:13:35.93:0,36,883	0/1:6,1:7:34.40:101,0,34	0/1:4,4:8:21.64:189,0,22	0/0:2,0:2:0.89:0,1,2
chr10	9464880	.	AC	A	908.29	PASS	AB=0.507;AC=37;AF=0.661;AN=56;BaseQRankSum=0.078;DP=290;FS=4.031;HRun=1;HaplotypeScore=177.9267;InbreedingCoeff=0.5311;MQ=33.67;MQ0=2;MQRankSum=-1.228;QD=3.75;ReadPosRankSum=2.527;VQSLOD=0.5546;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,4:7:8.36:29,8,0	0/1:1,0:8:0.17:16,0,0	0/0:2,0:2:5.18:0,5,26	0/0:9,0:4:0.89:0,1,8	1/1:1,6:8:11.57:36,12,0	1/1:0,13:13:27.39:89,27,0	1/1:2,11:13:19.47:61,19,0	1/1:0,5:5:6.66:21,7,0	1/1:0,19:19:39.96:126,40,0	1/1:0,13:14:26.84:86,27,0	1/1:0,13:15:8.16:44,8,0	0/1:0,0:9:11.79:12,0,21	0/1:0,0:10:8.67:9,0,21	0/1:0,0:5:0.99:1,0,8	1/1:3,10:13:24.03:76,24,0	1/1:1,15:16:33.30:105,33,0	1/1:1,0:6:9.70:32,10,0	1/1:2,8:8:15.10:44,15,0	0/0:1,0:8:15.20:0,15,59	0/0:2,0:15:19.66:0,20,58	0/0:5,0:9:10.22:0,10,63	0/0:0,0:3:1.24:0,1,19	1/1:1,22:27:21.05:93,21,0	1/1:1,11:14:23.20:83,23,0	1/1:2,9:13:14.69:55,15,0	1/1:0,0:8:13.14:41,13,0	0/1:0,0:9:1.19:21,0,1	0/0:2,0:2:2.88:0,3,15
chr10	9464886	.	GGAGGAAGA	G	1840.36	PASS	AB=0.988;AC=27;AF=0.482;AN=56;BaseQRankSum=-0.757;DP=340;FS=2.545;HRun=0;HaplotypeScore=255.1457;InbreedingCoeff=-0.1110;MQ=32.54;MQ0=4;MQRankSum=0.442;QD=7.19;ReadPosRankSum=-4.391;VQSLOD=1.9228;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:8:2.62:0,3,167	0/1:8,1:9:75.41:133,0,75	1/1:3,0:1:1.25:3,1,0	0/1:15,0:5:9.23:70,0,9	0/0:15,0:15:19.88:0,20,260	0/1:16,0:16:99:105,0,181	0/1:15,0:15:29.85:82,0,30	0/1:7,0:7:23.03:23,0,40	0/0:22,0:22:5.48:0,5,491	0/1:17,0:17:25.59:26,0,372	0/1:15,0:17:90.75:133,0,91	0/1:10,1:11:76.02:209,0,76	1/1:8,3:11:5.30:271,5,0	1/1:4,1:5:14.85:136,15,0	0/1:11,0:11:2.44:2,0,265	0/1:15,0:15:3.10:3,0,295	1/1:6,0:6:17.73:131,18,0	0/0:10,0:9:18.82:0,19,220	0/0:8,0:8:12.28:0,12,199	0/0:18,0:18:26.22:0,26,407	0/1:6,0:6:3.93:32,0,4	1/1:8,0:8:18.84:118,19,0	0/1:31,0:33:99:175,0,254	0/1:15,0:15:17.70:18,0,158	0/1:18,0:18:73.03:73,0,245	0/1:9,0:9:81.15:90,0,81	1/1:8,1:9:15.03:176,15,0	0/0:2,0:2:3.48:0,3,76
chr10	9464928	.	AGG	A	207.38	PASS	AB=0.969;AC=14;AF=0.250;AN=56;BaseQRankSum=8.115;DP=398;FS=89.276;HRun=2;HaplotypeScore=253.0405;InbreedingCoeff=-0.2112;MQ=30.80;MQ0=13;MQRankSum=2.782;QD=1.10;ReadPosRankSum=-1.258;VQSLOD=-0.4197;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:1.01:0,1,165	0/1:7,0:8:32.84:33,0,44	0/0:28,0:8:21.07:0,21,418	0/0:23,0:10:30.06:0,30,505	0/1:23,0:23:40.83:41,0,349	0/0:15,0:15:4.62:0,5,629	0/0:13,0:13:28.73:0,29,515	0/0:13,0:8:14.12:0,14,196	0/0:16,0:16:35.91:0,36,705	0/1:18,3:21:57.78:58,0,424	0/0:24,0:24:40.83:0,41,741	0/1:7,0:7:8.63:9,0,78	0/1:12,0:12:12.94:13,0,50	0/0:2,0:2:2.96:0,3,19	0/1:16,0:16:2.03:2,0,443	0/0:9,0:9:23.78:0,24,339	1/1:3,0:3:2.50:9,2,0	0/0:7,0:6:3.42:0,3,279	0/0:8,0:6:18.06:0,18,342	0/1:16,1:17:2.66:3,0,407	0/0:4,0:4:7.57:0,8,112	0/1:19,1:20:99:101,0,105	0/0:28,0:28:32.93:0,33,821	0/0:8,0:8:12.51:0,13,225	0/1:31,1:32:32.94:33,0,623	0/1:13,0:13:11.95:12,0,82	0/1:11,0:11:30.32:30,0,31	0/1:6,0:6:1.96:2,0,52
chr10	9464941	.	GA	G	437.12	PASS	AB=0.798;AC=14;AF=0.250;AN=56;BaseQRankSum=2.234;DP=364;FS=146.679;HRun=2;HaplotypeScore=225.0596;InbreedingCoeff=-0.3001;MQ=31.02;MQ0=9;MQRankSum=0.966;QD=2.03;ReadPosRankSum=-2.857;VQSLOD=0.0649;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:6,2:8:17.63:18,0,52	0/1:7,1:8:7.37:7,0,131	0/0:23,0:7:18.06:0,18,269	0/0:16,0:7:18.06:0,18,269	0/0:17,5:21:23.43:0,23,371	0/1:12,2:14:0.38:0,0,369	0/0:7,2:9:0.72:0,1,223	0/1:14,1:9:24.88:25,0,119	0/0:10,2:12:2.28:0,2,360	0/1:14,10:24:99:222,0,110	0/0:15,5:20:36.34:0,36,438	0/1:6,1:7:8.62:9,0,264	0/1:8,4:12:14.74:15,0,297	0/0:1,0:1:3.01:0,3,57	0/1:11,7:18:14.56:15,0,310	0/0:5,0:5:14.72:0,15,191	0/0:2,0:2:0:0,0,0	0/0:5,1:5:11.93:0,12,154	0/0:8,0:7:21.07:0,21,314	0/0:15,1:15:2.61:0,3,395	0/0:3,0:3:7.26:0,7,74	0/1:12,8:20:80.02:80,0,276	0/1:20,8:28:51.63:52,0,549	0/1:6,1:7:0.33:0,0,0	0/1:20,10:30:21.13:21,0,641	0/1:9,4:13:54.28:54,0,223	0/1:7,4:11:54.45:54,0,166	0/0:5,1:6:1.71:0,2,165
chr10	9464947	.	GA	G	448.54	PASS	AB=0.798;AC=16;AF=0.286;AN=56;BaseQRankSum=2.628;DP=339;FS=120.065;HRun=2;HaplotypeScore=212.6567;InbreedingCoeff=-0.3087;MQ=31.44;MQ0=5;MQRankSum=1.166;QD=2.15;ReadPosRankSum=-1.810;VQSLOD=0.3301;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:6,2:8:32.97:33,0,51	0/1:7,1:8:15.96:16,0,99	0/0:17,0:6:18.06:0,18,269	0/0:13,0:5:12.03:0,12,160	0/0:16,5:20:33.72:0,34,426	0/0:9,2:11:6.71:0,7,362	0/1:6,2:8:19.29:19,0,203	0/1:12,1:8:21.18:21,0,139	0/0:9,2:11:20.61:0,21,349	0/1:15,11:26:99:225,0,189	0/0:14,6:20:21.09:0,21,343	0/1:6,1:7:10:10,0,149	0/1:7,4:11:18.77:19,0,122	0/0:1,0:1:2.98:0,3,21	0/1:11,7:18:5.96:6,0,216	0/0:5,0:5:11.97:0,12,154	0/1:2,0:2:0:0,0,0	0/0:3,1:3:5.94:0,6,90	0/0:8,0:8:21.04:0,21,290	0/0:15,1:15:22.02:0,22,294	0/0:3,0:3:4.26:0,4,44	0/1:10,9:19:50.38:50,0,234	0/1:20,8:28:26.34:26,0,462	0/1:5,1:6:0.34:0,0,0	0/1:19,10:30:23.75:24,0,642	0/1:5,4:9:75.61:76,0,97	0/1:6,4:10:46.27:61,0,46	0/1:5,1:6:6.30:6,0,142
chr10	9464952	.	A	AGAG	2539.50	PASS	AB=0.971;AC=19;AF=0.339;AN=56;BaseQRankSum=-0.281;DP=311;FS=27.652;HRun=0;HaplotypeScore=211.7147;InbreedingCoeff=0.1111;MQ=32.03;MQ0=3;MQRankSum=-0.255;QD=13.16;ReadPosRankSum=1.853;VQSLOD=1.5113;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:7,0:7:29.10:29,0,40	0/1:7,0:7:14.56:15,0,22	0/0:12,0:6:15.03:0,15,193	0/0:8,0:3:6.02:0,6,102	0/0:21,0:20:19.37:0,19,216	0/0:11,0:11:0.56:0,1,269	0/0:7,0:7:11.60:0,12,230	0/0:11,0:8:1.28:0,1,89	0/0:10,0:10:17.37:0,17,233	0/1:17,9:26:62.92:535,0,63	1/1:9,11:20:36.12:612,36,0	0/0:7,0:7:6.46:0,6,54	0/1:10,0:10:22.61:56,0,23	0/0:1,0:1:0.89:0,1,2	1/1:13,4:17:16.05:355,16,0	0/0:3,0:3:9.03:0,9,148	1/1:2,0:2:2.04:6,2,0	0/0:4,0:3:1.31:0,1,43	0/0:7,0:7:15.49:0,15,198	0/0:13,0:12:14.38:0,14,196	0/0:3,0:3:0.15:0,0,1	0/1:18,0:18:34.70:37,0,35	1/1:14,14:28:57.68:913,58,0	1/1:3,3:6:5.98:77,6,0	0/1:29,0:29:20.02:20,0,375	0/1:9,0:9:20.74:21,0,43	0/1:9,0:9:23.12:23,0,48	0/1:5,0:5:1.95:2,0,23
chr10	9464954	.	AAG	A	334.25	PASS	AB=0.873;AC=12;AF=0.222;AN=54;BaseQRankSum=2.383;DP=294;FS=21.231;HRun=0;HaplotypeScore=192.5589;InbreedingCoeff=0.0802;MQ=32.24;MQ0=3;MQRankSum=-0.520;QD=2.63;ReadPosRankSum=1.205;VQSLOD=1.4403;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:6,0:6:2.86:3,0,49	0/0:6,0:6:17.71:0,18,138	0/0:12,0:6:15.03:0,15,215	0/0:7,0:3:6.02:0,6,122	0/0:21,0:20:30.42:0,30,262	0/0:10,0:10:23.25:0,23,302	0/0:7,0:7:7.82:0,8,221	0/0:10,0:7:8.99:0,9,110	0/0:10,0:10:24.99:0,25,324	0/1:25,0:25:35.30:35,0,217	0/1:17,0:17:3.02:38,0,3	0/1:2,5:7:46.01:51,0,46	0/1:6,4:10:30.81:84,0,31	1/1:0,1:1:2.90:16,3,0	0/0:15,0:15:7.33:0,7,70	0/0:3,0:3:9.03:0,9,155	./.	0/0:3,0:2:2.98:0,3,42	0/0:7,0:7:18.03:0,18,283	0/0:12,0:11:9.82:0,10,278	0/0:3,0:3:4.21:0,4,23	0/1:13,5:18:28.24:54,0,28	0/1:25,0:25:11.72:74,0,12	0/0:5,0:5:0.47:0,0,1	0/0:29,0:29:21.07:0,21,541	0/1:8,1:9:10.88:11,0,70	1/1:5,4:9:15.77:111,16,0	0/0:5,0:5:4.47:0,4,109
chr10	9464956	.	G	GA	1130.21	PASS	AB=0.881;AC=12;AF=0.222;AN=54;BaseQRankSum=-1.012;DP=282;FS=3.985;HRun=2;HaplotypeScore=179.4282;InbreedingCoeff=0.2767;MQ=32.32;MQ0=2;MQRankSum=-0.153;QD=9.83;ReadPosRankSum=1.398;VQSLOD=1.7831;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:6:2.64:0,3,62	0/0:6,0:6:3.13:0,3,47	0/0:10,0:4:9.03:0,9,120	0/0:7,0:3:6.02:0,6,79	0/0:19,0:19:16.49:0,16,182	0/0:10,0:10:22.11:0,22,260	0/0:7,0:7:9.19:0,9,182	0/0:9,0:7:13.53:0,14,96	0/0:10,0:10:5.03:0,5,210	0/1:16,9:25:99:224,0,155	1/1:6,11:17:30.29:341,30,0	0/0:7,0:7:15.28:0,15,134	0/0:10,0:10:13.83:0,14,107	0/0:1,0:1:3:0,3,27	0/1:11,4:15:20.07:137,0,20	0/0:3,0:3:9.03:0,9,122	./.	0/0:3,0:2:2.96:0,3,42	0/0:7,0:7:14.64:0,15,199	0/0:10,0:9:8.50:0,8,148	1/1:2,0:2:2.97:20,3,0	0/1:18,0:18:28.75:29,0,140	1/1:10,14:24:50.12:481,50,0	1/1:2,3:5:3.01:35,3,0	0/0:28,0:28:4.39:0,4,320	0/0:8,0:8:6.53:0,7,91	0/1:9,0:9:15.03:15,0,55	0/0:5,0:5:9.35:0,9,62
chr10	9466226	.	AT	A	4149.64	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=13.520;DP=693;FS=11.161;HRun=6;HaplotypeScore=68.0737;InbreedingCoeff=0.9911;MQ=72.65;MQ0=0;MQRankSum=-2.180;QD=27.85;ReadPosRankSum=2.595;VQSLOD=3.7415;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:96.25:0,96,1212	0/0:17,0:17:48.12:0,48,600	0/0:12,0:12:25.68:0,26,308	0/0:9,0:9:11.24:0,11,80	0/0:26,0:26:78.25:0,78,1021	0/0:29,0:29:87.27:0,87,1130	0/0:27,0:27:75.23:0,75,970	0/0:23,0:23:57.17:0,57,718	0/0:28,0:28:78.24:0,78,1008	1/1:1,45:46:99:1442,135,0	1/1:3,27:30:72.17:774,72,0	0/0:29,0:29:75.21:0,75,952	0/0:30,0:30:84.18:0,84,1031	0/0:32,0:32:93.28:0,93,1200	1/1:1,22:23:57.14:613,57,0	0/0:21,0:21:63.18:0,63,800	0/0:30,0:30:84.26:0,84,1087	0/0:14,0:14:39.11:0,39,498	0/0:23,0:23:66.18:0,66,819	0/0:41,0:41:99:0,117,1523	0/0:12,0:12:33.10:0,33,419	0/0:30,0:30:87.26:0,87,1098	1/1:2,33:35:83.96:902,84,0	1/1:1,14:15:39.10:419,39,0	0/0:21,0:21:54.17:0,54,697	0/0:25,0:25:37:0,37,836	0/0:18,0:18:51.17:0,51,669	0/0:15,0:15:45.15:0,45,591
chr10	9466923	.	T	TTCC	6208.84	PASS	AB=1.000;AC=35;AF=0.625;AN=56;BaseQRankSum=-4.531;DP=557;FS=3.420;HRun=0;HaplotypeScore=104.2708;InbreedingCoeff=0.8768;MQ=48.02;MQ0=53;MQRankSum=4.719;QD=17.39;ReadPosRankSum=3.084;VQSLOD=4.7395;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:21:43.79:322,44,0	1/1:4,0:4:11.96:95,12,0	0/0:14,0:8:9.46:0,9,134	0/0:5,0:2:5.50:0,6,39	1/1:23,0:22:29.26:369,29,0	1/1:28,0:25:65.64:540,66,0	1/1:30,0:25:65.54:471,66,0	1/1:32,0:28:15.16:457,15,0	1/1:17,0:16:35.92:403,36,0	0/0:19,0:16:46.55:0,47,337	0/0:17,0:14:38.26:0,38,241	1/1:13,0:10:26.99:264,27,0	1/1:24,0:20:59.55:456,60,0	1/1:10,1:9:26.86:234,27,0	0/0:16,0:15:41.34:0,41,263	1/1:13,0:11:17.89:147,18,0	1/1:23,0:22:59.78:531,60,0	0/1:13,0:10:13.91:113,0,14	0/0:28,0:22:9.27:0,9,398	0/0:43,0:41:94.39:0,94,763	0/0:29,0:24:47.76:0,48,410	1/1:19,2:15:20.18:287,20,0	0/0:14,0:13:35.37:0,35,221	0/0:15,0:12:20.23:0,20,130	1/1:24,0:21:31.04:372,31,0	1/1:13,0:9:10.72:184,11,0	1/1:18,3:18:53.86:608,54,0	1/1:21,0:19:19.70:359,20,0
chr10	9466986	.	TTCC	T	2119.31	PASS	AB=1.000;AC=38;AF=0.760;AN=50;BaseQRankSum=3.796;DP=386;FS=7.084;HRun=0;HaplotypeScore=75.3649;InbreedingCoeff=0.2069;MQ=26.77;MQ0=83;MQRankSum=0.605;QD=5.76;ReadPosRankSum=2.559;VQSLOD=1.0379;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:13:2.93:18,3,0	./.	./.	./.	1/1:17,0:13:17.83:147,18,0	1/1:21,1:21:35.65:247,36,0	0/1:22,0:10:31.48:41,0,31	0/1:41,0:14:25.18:25,0,103	1/1:8,1:8:5.51:101,6,0	0/1:7,0:5:5.33:5,0,68	1/1:7,0:3:5.91:38,6,0	1/1:10,0:5:8.87:58,9,0	0/0:5,0:2:2.50:0,2,9	1/1:11,0:7:17.67:109,18,0	0/1:7,0:4:0.60:1,0,12	1/1:20,0:14:12.18:107,12,0	1/1:11,1:8:14.80:100,15,0	0/1:7,0:6:8.15:53,0,8	0/1:23,0:13:52.83:53,0,90	1/1:28,0:26:15.37:266,15,0	1/1:24,0:15:12.20:92,12,0	1/1:14,0:10:17.53:108,18,0	0/0:3,0:1:2.94:0,3,18	0/0:9,0:6:2.50:0,2,27	1/1:23,0:21:25.30:222,25,0	1/1:16,0:11:29.79:216,30,0	1/1:16,1:14:32.59:227,33,0	1/1:11,0:8:5.66:26,6,0
chr10	9467040	.	CTCTTCT	C	633.11	PASS	AB=0.879;AC=12;AF=0.286;AN=42;BaseQRankSum=-0.723;DP=367;FS=3.414;HRun=0;HaplotypeScore=74.5235;InbreedingCoeff=-0.0652;MQ=23.64;MQ0=74;MQRankSum=-0.347;QD=3.33;ReadPosRankSum=-1.245;VQSLOD=1.1405;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:17,11:20:9.10:66,0,9	./.	./.	./.	0/1:9,3:10:6.46:57,0,6	0/0:15,1:15:24.90:0,25,202	0/0:16,0:6:6.48:0,6,57	1/1:33,0:6:15.03:188,15,0	0/0:7,9:11:2.92:0,3,17	./.	0/0:5,0:3:3:0,3,29	0/0:10,0:6:6.44:0,6,65	./.	0/1:14,3:13:99:149,0,132	./.	0/1:23,3:17:68.18:74,0,68	0/0:9,1:7:2.95:0,3,19	1/1:7,0:5:2.84:9,3,0	0/1:17,0:4:9.49:9,0,78	0/0:17,0:14:36:0,36,483	0/0:37,0:21:12.49:0,12,162	0/1:9,2:10:24.72:25,0,45	0/0:3,0:3:3.01:0,3,38	0/0:11,0:5:10.57:0,11,83	0/1:16,0:12:13.34:13,0,143	0/1:21,2:14:99:173,0,143	0/0:10,0:8:13.54:0,14,120	./.
chr10	9467049	.	CTCCTCT	C	449.72	PASS	AB=1.000;AC=17;AF=0.405;AN=42;BaseQRankSum=1.477;DP=391;FS=0.996;HRun=0;HaplotypeScore=69.7304;InbreedingCoeff=0.0337;MQ=22.60;MQ0=98;MQRankSum=-0.841;QD=1.87;ReadPosRankSum=1.448;VQSLOD=1.4359;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:34,0:21:20.70:25,0,21	./.	./.	./.	1/1:8,0:7:0.86:41,1,0	0/0:16,0:14:17.36:0,17,153	0/1:17,0:6:1.93:2,0,67	1/1:46,5:7:15:208,15,0	1/1:17,0:13:3.22:13,3,0	./.	0/0:3,0:2:3.01:0,3,36	0/0:8,0:6:2.82:0,3,37	./.	0/1:16,0:11:99:145,0,120	./.	0/1:25,0:14:33.73:41,0,34	1/1:13,0:8:0.47:1,0,0	1/1:12,0:8:1.25:3,1,0	0/1:14,0:4:13.44:13,0,122	0/0:19,0:16:38.93:0,39,698	0/0:37,0:21:12.04:0,12,226	0/1:11,0:9:26.40:26,0,27	0/0:2,0:2:3.01:0,3,32	0/0:13,0:6:6.30:0,6,36	0/0:16,0:12:14.83:0,15,115	0/1:22,0:13:57.64:58,0,127	0/0:6,0:4:8.84:0,9,101	./.
chr10	9467058	.	CTCCTCT	C	1246.50	PASS	AB=1.000;AC=29;AF=0.630;AN=46;BaseQRankSum=4.444;DP=436;FS=4.772;HRun=0;HaplotypeScore=67.8158;InbreedingCoeff=0.3864;MQ=21.96;MQ0=113;MQRankSum=-2.809;QD=4.62;ReadPosRankSum=-0.917;VQSLOD=0.9945;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:21:4.35:0,4,17	1/1:4,0:3:5.97:56,6,0	./.	./.	1/1:7,1:7:5.23:37,5,0	1/1:16,1:13:6.02:78,6,0	1/1:18,0:5:0.47:1,0,0	0/1:56,0:7:14.63:74,0,15	1/1:20,0:15:5.81:51,6,0	1/1:3,0:1:2.96:19,3,0	0/0:4,0:2:0.47:0,0,1	1/1:9,1:8:11.91:130,12,0	./.	1/1:17,1:13:28.22:246,28,0	./.	1/1:28,0:15:6.07:94,6,0	1/1:15,0:9:5.97:58,6,0	1/1:15,0:9:4.26:67,4,0	0/0:13,0:4:9.49:0,9,154	0/0:20,0:16:39.10:0,39,697	0/0:41,0:22:14.98:0,15,253	1/1:11,0:9:8.86:110,9,0	0/0:2,0:2:3.01:0,3,46	0/0:15,0:6:5.70:0,6,36	1/1:15,2:12:7.84:81,8,0	0/1:24,0:13:99:228,0,107	0/1:6,0:4:41.23:68,0,41	./.
chr10	9467103	.	CTCT	C	106.94	PASS	AB=0.941;AC=6;AF=0.125;AN=48;BaseQRankSum=-1.083;DP=389;FS=0.000;HRun=0;HaplotypeScore=46.3645;InbreedingCoeff=-0.0254;MQ=19.77;MQ0=116;MQRankSum=-0.647;QD=1.07;ReadPosRankSum=0.662;VQSLOD=0.8476;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:9:3.98:0,4,43	0/0:5,0:4:11.10:0,11,79	./.	./.	./.	0/0:10,0:6:8.86:0,9,96	0/0:20,0:4:6:0,6,91	0/0:36,0:1:1.55:0,2,4	0/0:14,0:9:4.56:0,5,39	0/0:12,0:6:17.70:0,18,202	0/0:12,0:7:15.23:0,15,98	0/0:7,0:4:11.95:0,12,109	./.	0/0:13,0:4:10.27:0,10,101	0/0:18,0:3:2.88:0,3,15	0/0:33,0:16:21.07:0,21,305	0/1:13,0:4:14.65:15,0,24	0/0:16,0:9:6.02:0,6,109	0/1:20,1:3:37.11:45,0,37	0/1:13,4:15:81.96:127,0,82	0/1:38,0:26:9.97:10,0,96	0/0:5,0:2:2.93:0,3,20	0/0:7,0:6:5.90:0,6,37	0/0:22,0:10:0.81:0,1,83	0/0:9,0:5:3.01:0,3,67	0/0:13,0:6:11.69:0,12,80	0/0:3,0:2:3.01:0,3,38	1/1:11,0:7:2.94:18,3,0
chr10	9467118	.	TTCC	T	299.43	PASS	AB=0.939;AC=9;AF=0.180;AN=50;BaseQRankSum=-2.709;DP=399;FS=40.735;HRun=0;HaplotypeScore=55.9715;InbreedingCoeff=-0.1182;MQ=20.73;MQ0=116;MQRankSum=-2.166;QD=2.00;ReadPosRankSum=-0.658;VQSLOD=0.0503;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:6:3.01:0,3,37	0/0:5,0:4:11.81:0,12,74	./.	./.	./.	0/0:9,0:5:12.04:0,12,158	0/0:15,0:4:5.98:0,6,89	0/0:48,0:1:2.97:0,3,20	0/0:11,0:6:5.96:0,6,43	0/1:17,0:11:14.97:15,0,178	0/0:17,0:12:15.79:0,16,268	0/0:8,0:4:11.97:0,12,144	0/0:9,0:3:3.01:0,3,44	0/0:12,0:4:10.93:0,11,78	0/1:11,5:4:14.63:15,0,76	0/1:23,7:16:44.91:295,0,45	0/1:12,0:4:1.59:2,0,13	0/0:16,0:8:6.02:0,6,109	0/0:26,0:4:6.91:0,7,85	0/0:22,0:19:30.64:0,31,379	1/1:23,8:21:3:51,3,0	0/0:4,0:1:2.98:0,3,22	0/1:12,0:9:8.07:8,0,25	0/1:24,0:12:18.87:19,0,101	0/0:8,0:4:3.01:0,3,69	0/0:14,0:7:11.98:0,12,135	0/0:2,0:1:3.01:0,3,36	0/1:8,0:5:14:15,0,14
chr10	9467124	.	TTCC	T	571.24	PASS	AB=0.945;AC=9;AF=0.180;AN=50;BaseQRankSum=-2.317;DP=393;FS=34.018;HRun=0;HaplotypeScore=56.8216;InbreedingCoeff=-0.2108;MQ=21.26;MQ0=114;MQRankSum=-1.207;QD=3.81;ReadPosRankSum=-1.850;VQSLOD=-0.2614;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:4:3.01:0,3,37	0/0:5,0:4:11.78:0,12,72	./.	./.	./.	0/0:9,0:5:12.04:0,12,161	0/0:14,0:4:5.99:0,6,90	0/0:52,0:2:0.47:0,0,1	0/0:10,0:5:3:0,3,29	0/1:11,7:13:85.86:224,0,86	0/1:18,0:13:99:135,0,143	0/0:7,0:4:11.97:0,12,142	0/1:10,0:4:3.90:4,0,38	0/0:10,0:4:10.93:0,11,78	0/1:14,2:4:75.40:88,0,75	0/1:29,0:16:46.24:67,0,46	0/1:12,0:4:2:2,0,13	0/0:15,0:8:6.02:0,6,110	0/0:31,0:6:15.02:0,15,194	0/0:20,0:18:11.80:0,12,322	0/0:29,0:21:0.94:0,1,2	0/0:4,0:1:2.98:0,3,22	0/1:15,0:12:29.69:47,0,30	0/1:22,3:13:96.61:108,0,97	0/0:5,0:2:3.01:0,3,68	0/0:11,0:6:11.98:0,12,135	0/0:2,0:1:3.01:0,3,36	0/1:7,0:4:14.89:15,0,33
chr10	9467127	.	C	CTCT	704.76	PASS	AB=0.984;AC=10;AF=0.200;AN=50;BaseQRankSum=-2.363;DP=386;FS=40.304;HRun=0;HaplotypeScore=58.3234;InbreedingCoeff=-0.0718;MQ=22.44;MQ0=107;MQRankSum=-1.556;QD=4.32;ReadPosRankSum=-2.977;VQSLOD=-0.3448;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:2:2.94:0,3,18	0/0:5,0:4:12.04:0,12,149	./.	./.	./.	0/0:9,0:5:12.04:0,12,167	0/0:15,0:5:0.64:0,1,61	1/1:51,0:3:0.70:2,1,0	0/0:10,0:5:3:0,3,29	0/1:19,0:15:62.98:361,0,63	0/1:19,0:14:19.22:150,0,19	0/0:7,0:4:12.03:0,12,161	0/1:10,0:4:3.90:4,0,42	0/0:10,0:4:11.07:0,11,116	0/1:17,1:7:77.05:132,0,77	0/0:28,0:15:12.30:0,12,284	0/0:12,0:4:0.26:0,0,31	0/0:15,0:8:6.02:0,6,81	0/0:29,0:6:15.02:0,15,206	0/0:19,0:17:6.42:0,6,234	0/0:28,0:20:3.48:0,3,49	0/0:4,0:1:2.98:0,3,21	1/1:2,14:13:4.82:52,5,0	0/1:22,1:11:60.47:108,0,60	0/0:6,0:2:3.01:0,3,48	0/0:10,0:6:11.94:0,12,135	0/0:1,0:1:3.01:0,3,36	0/1:6,0:4:14.84:15,0,33
chr10	9467136	.	TTCC	T	1116.53	PASS	AB=0.963;AC=33;AF=0.635;AN=52;BaseQRankSum=0.109;DP=387;FS=0.732;HRun=0;HaplotypeScore=65.1753;InbreedingCoeff=-0.1205;MQ=24.01;MQ0=91;MQRankSum=-0.137;QD=3.24;ReadPosRankSum=-2.664;VQSLOD=1.2248;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:3:2.85:0,3,30	1/1:5,0:4:11.89:82,12,0	./.	./.	1/1:3,1:2:3.01:35,3,0	0/1:7,0:5:11.06:11,0,68	0/1:13,1:5:29.73:30,0,49	0/1:47,0:3:37.15:37,0,65	0/0:8,1:5:3:0,3,28	0/1:23,0:18:33.69:34,0,125	1/1:18,0:15:23.55:287,24,0	1/1:8,0:5:11.87:81,12,0	1/1:11,1:6:6.49:91,6,0	1/1:9,0:3:5.47:39,5,0	0/1:18,0:8:36.98:66,0,37	0/1:27,1:15:39.87:40,0,251	1/1:13,0:6:8.16:48,8,0	0/0:15,0:8:5.99:0,6,60	1/1:26,2:7:8.98:62,9,0	0/1:14,4:16:43.08:155,0,43	0/1:22,1:18:33.92:38,0,34	1/1:6,1:3:2.92:17,3,0	1/1:16,0:13:2.11:14,2,0	0/1:26,0:14:0.98:1,0,60	0/0:5,0:2:0.89:0,1,2	0/1:11,1:7:63.66:64,0,64	1/1:3,0:2:2.97:20,3,0	0/1:6,0:4:14.89:15,0,32
chr10	9467154	.	T	TTC	250.65	PASS	AB=0.964;AC=20;AF=0.400;AN=50;BaseQRankSum=1.584;DP=364;FS=13.493;HRun=0;HaplotypeScore=72.9278;InbreedingCoeff=0.0379;MQ=28.35;MQ0=61;MQRankSum=-0.642;QD=1.04;ReadPosRankSum=2.473;VQSLOD=0.0889;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:7,0:4:0.81:1,0,8	1/1:2,0:2:0.47:1,0,0	./.	./.	1/1:5,0:3:2.50:9,2,0	0/1:7,1:7:47.19:49,0,47	1/1:11,0:4:2.74:12,3,0	0/1:43,0:7:2.77:3,0,103	0/0:8,0:6:8.96:0,9,69	0/1:24,1:20:2.06:2,0,598	0/1:21,1:19:8.92:9,0,407	0/1:11,2:9:49.56:113,0,50	1/1:12,0:8:8.89:72,9,0	0/1:5,0:2:0:0,0,0	0/1:15,2:12:75.92:76,0,348	0/0:22,0:15:10.54:0,11,232	0/0:9,0:4:4.81:0,5,28	./.	0/1:15,0:4:1.93:16,0,2	0/1:20,0:18:6.27:6,0,144	0/1:21,0:16:10.88:11,0,36	0/0:9,0:6:5.99:0,6,51	0/0:23,0:20:30.03:0,30,372	0/0:23,0:14:29.31:0,29,374	0/0:10,0:7:14.98:0,15,137	0/1:15,0:10:0.75:1,0,96	0/0:4,0:3:2.03:0,2,6	0/0:6,0:5:11.99:0,12,115
chr10	9467181	.	TTCC	T	493.37	PASS	AB=0.982;AC=7;AF=0.140;AN=50;BaseQRankSum=-0.769;DP=375;FS=4.847;HRun=0;HaplotypeScore=84.0231;InbreedingCoeff=0.3154;MQ=31.90;MQ0=67;MQRankSum=-4.302;QD=6.49;ReadPosRankSum=-0.159;VQSLOD=2.0602;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:10,0:4:3.49:3,0,7	0/0:4,0:4:8.99:0,9,114	./.	./.	0/0:6,0:4:2.97:0,3,32	0/1:8,0:6:9.01:9,0,80	0/0:6,0:2:3.01:0,3,34	0/0:30,0:4:3.01:0,3,51	0/0:11,0:5:6.02:0,6,130	0/0:26,0:24:63.19:0,63,1240	0/0:23,0:23:57.19:0,57,1188	0/0:14,0:10:24.03:0,24,342	0/0:14,0:11:24.50:0,24,330	0/0:3,0:2:3.01:0,3,36	0/0:21,0:15:45.15:0,45,900	0/0:8,0:4:9.03:0,9,133	0/0:9,0:6:12.04:0,12,204	./.	1/1:20,2:1:3.01:47,3,0	1/1:8,10:17:42.92:544,43,0	0/1:17,1:10:8.65:9,0,95	0/0:14,0:11:11.99:0,12,184	0/0:34,0:31:57.19:0,57,1172	0/0:25,0:19:32.97:0,33,674	0/0:8,0:7:9.03:0,9,135	0/0:22,0:16:24.07:0,24,333	0/0:8,0:5:11.97:0,12,149	0/0:8,0:7:20.85:0,21,320
chr10	9467187	.	CTCT	C	197.77	PASS	AB=0.947;AC=8;AF=0.160;AN=50;BaseQRankSum=1.026;DP=409;FS=6.562;HRun=0;HaplotypeScore=85.8347;InbreedingCoeff=0.1509;MQ=30.89;MQ0=70;MQRankSum=-3.120;QD=2.08;ReadPosRankSum=-0.879;VQSLOD=0.8253;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:8,2:4:1.25:4,1,0	0/0:4,0:4:8.83:0,9,71	./.	./.	0/1:9,1:4:8.08:11,0,8	0/0:8,0:7:6.45:0,6,54	0/0:8,1:3:2.90:0,3,16	0/0:26,0:2:3.01:0,3,40	0/0:4,6:5:6.02:0,6,129	0/0:26,0:24:66.14:0,66,1347	0/0:24,0:23:63.07:0,63,1246	0/0:16,0:11:22.93:0,23,243	0/0:16,0:12:22.68:0,23,189	0/0:6,0:5:5.67:0,6,29	0/0:24,0:17:50.86:0,51,922	0/1:11,1:7:19.38:19,0,68	0/0:11,0:7:11.92:0,12,164	./.	1/1:22,0:1:3:26,3,0	0/1:20,1:20:54.42:243,0,54	0/1:20,0:10:8.65:9,0,116	0/0:14,1:12:14.71:0,15,169	0/0:33,0:30:60.09:0,60,1254	0/0:28,0:19:36.04:0,36,737	0/0:8,1:7:11.82:0,12,111	0/0:22,0:15:26.36:0,26,209	0/0:11,0:5:11.71:0,12,105	0/0:8,0:7:12.99:0,13,245
chr10	9467214	.	TTCCTCC	T	1327.06	PASS	AB=0.980;AC=22;AF=0.440;AN=50;BaseQRankSum=-5.019;DP=464;FS=18.776;HRun=0;HaplotypeScore=107.9201;InbreedingCoeff=-0.2403;MQ=30.92;MQ0=74;MQRankSum=1.404;QD=3.86;ReadPosRankSum=-4.118;VQSLOD=-0.5774;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:4:6.02:74,6,0	0/1:5,1:6:83.56:107,0,84	./.	./.	0/0:11,0:5:0.77:0,1,29	0/1:11,1:9:78.87:115,0,79	0/1:18,0:7:8.16:56,0,8	0/0:10,0:2:1.11:0,1,26	0/0:14,0:9:6.02:0,6,81	0/1:32,0:27:22.36:125,0,22	1/1:21,0:19:8.98:92,9,0	0/1:20,0:12:69.05:69,0,169	0/1:19,0:15:25.71:26,0,206	0/1:14,0:11:42.87:174,0,43	0/0:20,0:14:0.04:0,0,3	0/1:14,0:9:10.20:37,0,10	0/1:15,0:8:4.41:4,0,130	./.	0/1:19,0:7:5.18:58,0,5	0/1:31,2:31:5.41:315,0,5	0/1:20,0:12:28.59:71,0,29	0/0:17,0:14:17.98:0,18,177	1/1:31,0:28:9.08:43,9,0	0/1:30,0:25:25.17:25,0,52	1/1:9,1:8:6.03:63,6,0	0/0:30,0:18:32.95:0,33,356	0/1:14,0:7:18.36:18,0,116	0/0:9,0:8:3.25:0,3,177
chr10	9467788	.	G	GA	1915.25	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-8.910;DP=509;FS=4.070;HRun=6;HaplotypeScore=47.4315;InbreedingCoeff=0.9473;MQ=78.05;MQ0=0;MQRankSum=-0.848;QD=29.47;ReadPosRankSum=0.753;VQSLOD=4.1932;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:48.08:0,48,480	0/0:8,0:8:21.05:0,21,214	0/0:16,0:16:14.30:0,14,278	0/0:11,0:11:19.03:0,19,182	0/0:28,0:28:75.15:0,75,757	0/0:20,0:20:57.13:0,57,581	0/0:22,0:22:60.13:0,60,612	0/0:29,0:29:78.17:0,78,791	0/0:5,0:5:15.03:0,15,153	0/0:28,0:28:78.16:0,78,787	0/0:24,0:24:63.13:0,63,636	0/0:17,0:17:48.11:0,48,490	0/0:21,0:21:45.56:0,46,476	0/0:12,0:12:33.07:0,33,336	0/0:15,0:15:45.10:0,45,459	0/0:9,0:9:24.05:0,24,245	0/0:25,0:25:72.13:0,72,725	0/0:12,0:12:27.06:0,27,275	1/1:3,21:24:60.19:755,60,0	1/1:4,25:29:72.19:888,72,0	1/1:1,11:12:33.11:415,33,0	0/0:21,0:21:60.12:0,60,605	0/0:23,0:23:66.14:0,66,666	0/0:12,0:12:33.07:0,33,337	0/0:15,0:15:45.10:0,45,459	0/0:20,0:20:57.13:0,57,581	0/0:27,0:26:75.17:0,75,765	0/0:5,0:5:6.01:0,6,61
chr10	9469697	.	A	AC	7960.26	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-3.063;DP=740;FS=1.779;HRun=3;HaplotypeScore=74.7257;InbreedingCoeff=0.9758;MQ=77.43;MQ0=0;MQRankSum=-3.939;QD=36.68;ReadPosRankSum=3.063;VQSLOD=5.4225;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,123,1509	1/1:0,16:16:45.15:648,45,0	0/0:25,0:25:75.05:0,75,894	0/0:20,0:20:47.45:0,47,642	0/0:24,0:24:69.22:0,69,851	0/0:24,0:24:72.23:0,72,893	0/0:24,0:24:66.14:0,66,786	0/0:38,0:38:99:0,102,1241	0/0:24,0:24:69.20:0,69,842	0/0:28,0:28:75.22:0,75,918	0/0:25,0:25:72.22:0,72,875	1/1:1,21:22:60.20:860,60,0	1/1:0,26:26:63.68:906,64,0	1/1:0,25:25:63.21:907,63,0	0/0:29,0:29:81.25:0,81,1004	0/0:25,0:25:69.22:0,69,854	1/1:2,17:19:42.14:605,42,0	0/0:21,0:21:60.19:0,60,743	0/0:16,0:16:45.13:0,45,547	0/0:44,0:44:99:0,123,1509	0/0:26,0:26:66.20:0,66,818	1/1:0,28:28:69.23:994,69,0	0/0:25,0:25:69.22:0,69,855	0/0:26,0:26:75.24:0,75,930	0/0:34,0:34:96.30:0,96,1188	1/1:4,24:28:3.84:942,4,0	1/1:0,30:30:81.27:1166,81,0	1/1:1,22:23:66.21:933,66,0
chr10	9469762	.	A	ACATC	5874.98	PASS	AB=0.967;AC=11;AF=0.196;AN=56;BaseQRankSum=-12.732;DP=796;FS=3.238;HRun=0;HaplotypeScore=158.8058;InbreedingCoeff=0.9316;MQ=74.21;MQ0=1;MQRankSum=-2.110;QD=33.38;ReadPosRankSum=0.583;VQSLOD=5.0945;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:57.08:0,57,909	0/0:10,0:10:18.06:0,18,292	0/0:48,0:44:45.96:0,46,827	0/0:31,0:29:27.46:0,27,649	0/0:28,0:28:54.17:0,54,854	0/0:27,0:27:60.19:0,60,953	0/0:32,0:32:72.22:0,72,1131	0/0:29,0:29:45.14:0,45,708	0/0:27,0:27:63.21:0,63,1032	1/1:14,17:31:60.21:1427,60,0	1/1:17,18:37:54.19:1302,54,0	0/0:27,0:27:51.15:0,51,782	0/0:19,0:19:33.11:0,33,535	0/0:29,0:29:54.64:0,55,853	1/1:6,18:25:51.18:1244,51,0	0/0:34,0:34:87.28:0,87,1396	0/0:25,0:25:60.19:0,60,944	0/0:20,0:20:42.14:0,42,670	0/0:21,0:21:36.04:0,36,526	0/0:34,0:34:57.19:0,57,921	0/0:33,0:33:78.13:0,78,1231	0/0:24,0:24:45.15:0,45,715	1/1:9,12:23:30.10:732,30,0	1/1:11,20:31:47.96:1170,48,0	0/0:32,0:32:23.49:0,23,961	0/1:28,1:29:0.98:1,0,1002	0/0:41,0:41:78.26:0,78,1243	0/0:11,0:11:21.07:0,21,340
chr10	9470229	.	TACACACAC	T	1562.36	PASS	AC=22;AF=0.440;AN=50;BaseQRankSum=4.957;DP=628;FS=28.273;HRun=0;HaplotypeScore=206.5059;InbreedingCoeff=0.7984;MQ=67.70;MQ0=12;MQRankSum=-5.554;QD=7.85;ReadPosRankSum=0.573;VQSLOD=1.1641;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:43:39.13:0,39,1311	1/1:8,0:8:3.01:70,3,0	./.	./.	0/0:24,0:24:18.06:0,18,580	0/0:24,0:23:27.09:0,27,939	0/0:23,0:23:24.08:0,24,710	0/0:29,0:28:21.05:0,21,433	0/0:11,0:20:18.06:0,18,382	0/0:22,0:22:21.07:0,21,569	0/0:14,0:14:30.10:0,30,1015	1/1:19,2:23:9.03:205,9,0	1/1:10,4:14:2.76:75,3,0	1/1:15,3:19:12.51:284,13,0	0/0:25,0:26:39.13:0,39,1296	0/0:20,0:20:24.08:0,24,794	1/1:17,0:17:2.07:61,2,0	0/0:16,0:19:32.99:0,33,851	1/1:11,0:12:2.54:55,3,0	1/1:12,0:20:7.23:80,7,0	./.	1/1:21,5:28:12.02:284,12,0	0/0:14,0:16:8.96:0,9,211	0/0:35,0:36:48.16:0,48,1446	0/0:20,0:20:15.05:0,15,490	1/1:28,8:37:21.02:316,21,0	1/1:8,5:15:11.02:260,11,0	1/1:2,0:3:3.01:56,3,0
chr10	9470674	.	CTGT	C	317.08	PASS	AB=0.778;AC=7;AF=0.125;AN=56;BaseQRankSum=7.999;DP=395;FS=32.275;HRun=0;HaplotypeScore=89.4747;InbreedingCoeff=-0.1892;MQ=70.98;MQ0=0;MQRankSum=-8.710;QD=3.82;ReadPosRankSum=-3.572;VQSLOD=-0.6198;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,4:25:21.22:0,21,585	0/1:4,3:7:32.74:33,0,154	0/0:14,0:14:42.13:0,42,903	0/0:22,0:19:50.94:0,51,1063	0/0:14,3:17:15.03:0,15,295	0/1:9,4:13:40.39:40,0,225	0/0:11,1:12:18.06:0,18,413	0/0:21,0:21:63.22:0,63,1545	0/0:5,1:6:5.07:0,5,146	0/1:15,6:21:99:136,0,948	0/0:10,4:14:14.10:0,14,368	0/1:6,4:10:35.24:35,0,137	0/0:17,6:23:0.45:0,0,666	0/0:12,2:14:15.04:0,15,324	0/0:10,2:12:12.04:0,12,292	0/0:11,2:13:16.06:0,16,303	0/0:12,0:12:24.08:0,24,531	0/1:7,2:9:51.08:51,0,457	0/0:8,1:9:1.63:0,2,566	0/0:8,6:14:11.02:0,11,293	0/0:15,0:15:39.13:0,39,960	0/0:7,5:12:3.01:0,3,74	0/0:11,3:15:20.94:0,21,356	0/0:17,0:18:21.17:0,21,463	0/0:8,2:10:13.10:0,13,313	0/1:9,4:13:99:132,0,617	0/0:11,2:13:8.02:0,8,300	0/1:9,1:10:16.50:16,0,564
chr10	9470695	.	C	CGCAT	71.80	PASS	AB=0.990;AC=16;AF=0.286;AN=56;BaseQRankSum=1.617;DP=307;FS=4.666;HRun=0;HaplotypeScore=78.7698;InbreedingCoeff=0.0565;MQ=40.95;MQ0=1;MQRankSum=-1.173;QD=0.56;ReadPosRankSum=-3.794;VQSLOD=0.6534;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:24:10.65:19,0,11	0/0:5,0:5:0.64:0,1,8	0/0:4,0:4:11.51:0,12,122	0/1:8,0:5:13.28:13,0,69	0/0:12,0:12:3:0,3,25	1/1:12,0:12:4.25:17,4,0	1/1:7,0:7:2.98:21,3,0	0/0:7,0:6:13.15:0,13,89	0/0:9,0:9:2.27:0,2,17	0/1:14,1:15:25.32:25,0,118	0/0:13,1:14:5.23:0,5,37	1/1:9,0:9:1.58:5,2,0	0/0:20,0:20:7.24:0,7,59	0/0:14,0:14:3.88:0,4,27	1/1:8,0:8:0.45:1,0,0	0/0:13,0:13:1.80:0,2,19	0/0:9,0:9:5.88:0,6,36	0/0:9,0:9:9.76:0,10,60	0/1:11,0:11:49.57:50,0,60	0/1:13,0:13:13.51:28,0,14	0/0:8,0:8:9.14:0,9,67	0/0:14,1:15:3:0,3,25	0/0:12,1:13:1.81:0,2,5	0/0:13,0:13:5.74:0,6,48	1/1:8,0:8:1.41:3,1,0	0/1:14,0:14:18.76:19,0,123	0/0:10,0:10:5.49:0,5,36	0/0:3,0:3:1.55:0,2,4
chr10	9471077	.	A	ATT	159.97	PASS	AB=1.000;AC=15;AF=0.625;AN=24;BaseQRankSum=-1.774;DP=22;FS=3.090;HRun=0;HaplotypeScore=46.4286;InbreedingCoeff=0.3064;MQ=59.87;MQ0=0;MQRankSum=0.231;QD=10.00;ReadPosRankSum=-1.466;VQSLOD=2.8948;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:1,0:1:2.98:0,3,22	./.	./.	1/1:0,2:2:6.02:65,6,0	1/1:2,3:5:3.01:31,3,0	1/1:0,1:1:3.01:36,3,0	./.	1/1:0,1:1:3.01:33,3,0	0/0:1,0:1:2.60:0,3,10	1/1:1,1:2:3.01:31,3,0	1/1:0,1:1:3.01:32,3,0	./.	0/0:1,0:1:2.74:0,3,12	./.	0/0:1,0:1:0:0,0,0	./.	1/1:1,0:1:2.98:21,3,0	./.	./.	./.	./.	./.	./.	./.	0/1:3,0:3:0.24:1,0,0	./.
chr10	9471080	.	GCT	G	48.29	PASS	AC=14;AF=0.583;AN=24;BaseQRankSum=1.246;DP=22;FS=0.000;HRun=0;HaplotypeScore=30.0949;InbreedingCoeff=0.3626;MQ=59.87;MQ0=0;MQRankSum=0.278;QD=3.71;ReadPosRankSum=-0.278;VQSLOD=1.3701;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:1,0:1:2.92:0,3,17	./.	./.	1/1:0,2:2:5.92:38,6,0	1/1:2,3:5:2.94:18,3,0	1/1:0,1:1:2.99:23,3,0	./.	1/1:0,1:1:2.98:21,3,0	./.	1/1:1,1:2:2.94:18,3,0	1/1:0,1:1:2.96:19,3,0	./.	0/0:1,0:1:0:0,0,0	./.	0/0:1,0:1:0.47:0,0,1	./.	0/0:1,0:1:2.99:0,3,24	./.	./.	./.	./.	./.	./.	1/1:1,0:1:0.47:1,0,0	0/0:3,0:3:5.99:0,6,60	./.
chr10	9471141	.	T	TC	278.16	PASS	AB=1.000;AC=21;AF=0.656;AN=32;BaseQRankSum=0.754;DP=39;FS=6.608;HRun=0;HaplotypeScore=59.2253;InbreedingCoeff=0.4027;MQ=85.36;MQ0=0;MQRankSum=-1.928;QD=8.97;ReadPosRankSum=-1.174;VQSLOD=2.3166;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,1:1:3.01:37,3,0	0/0:1,0:1:0:0,0,0	0/0:1,0:1:3.01:0,3,42	0/0:3,0:3:4.93:0,5,17	1/1:2,2:4:8.77:56,9,0	1/1:0,1:1:3.01:40,3,0	./.	./.	./.	1/1:1,0:1:2.04:6,2,0	1/1:3,0:3:3.03:17,3,0	0/0:1,0:1:1.55:0,2,4	0/0:1,0:1:1.82:0,2,5	./.	./.	./.	./.	./.	./.	1/1:5,0:5:14.10:78,14,0	./.	1/1:1,0:1:2.88:15,3,0	1/1:7,0:7:11.27:60,11,0	./.	1/1:0,3:3:8.66:49,9,0	0/1:4,0:4:0.04:0,0,0	1/1:1,0:1:2.94:18,3,0	./.
chr10	9471184	.	CTTTCT	C	2134.19	PASS	AC=24;AF=0.857;AN=28;BaseQRankSum=2.868;DP=60;FS=9.546;HRun=0;HaplotypeScore=146.2234;InbreedingCoeff=0.5305;MQ=62.93;MQ0=0;MQRankSum=-2.906;QD=38.11;ReadPosRankSum=2.637;VQSLOD=3.2107;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	1/1:0,3:3:9.03:135,9,0	0/0:2,0:2:6.02:0,6,115	0/0:1,0:1:3.01:0,3,50	1/1:0,9:9:23.81:316,24,0	./.	./.	./.	./.	1/1:0,3:3:6.02:105,6,0	1/1:0,6:6:18.06:271,18,0	./.	1/1:0,1:1:3.01:49,3,0	./.	./.	./.	./.	./.	./.	1/1:0,3:3:9.03:136,9,0	./.	1/1:0,6:6:18.06:283,18,0	1/1:0,11:11:26.82:368,27,0	./.	1/1:0,5:5:15.05:239,15,0	1/1:0,4:4:6.02:105,6,0	1/1:0,2:2:6.02:97,6,0	1/1:0,3:3:9.03:130,9,0
chr10	9471194	.	T	TA	1185.86	PASS	AC=24;AF=0.857;AN=28;BaseQRankSum=2.868;DP=61;FS=9.546;HRun=0;HaplotypeScore=148.1724;InbreedingCoeff=0.5051;MQ=70.38;MQ0=0;MQRankSum=-2.906;QD=21.18;ReadPosRankSum=2.637;VQSLOD=4.3411;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	1/1:0,3:3:8.80:69,9,0	0/0:3,0:3:5.75:0,6,54	0/0:1,0:1:2.22:0,2,7	1/1:0,9:9:22.79:181,23,0	./.	./.	./.	./.	1/1:0,3:3:6.02:65,6,0	1/1:0,6:6:17.99:157,18,0	./.	1/1:0,1:1:3:28,3,0	./.	./.	./.	./.	./.	./.	1/1:0,3:3:8.98:73,9,0	./.	1/1:0,6:6:18.02:179,18,0	1/1:0,11:11:25.48:209,25,0	./.	1/1:0,5:5:15:134,15,0	1/1:0,4:4:6.01:64,6,0	1/1:0,2:2:5.97:51,6,0	1/1:0,3:3:8.61:71,9,0
chr10	9471214	.	CTG	C	982.38	PASS	AC=26;AF=0.929;AN=28;BaseQRankSum=1.676;DP=73;FS=12.937;HRun=0;HaplotypeScore=176.6921;InbreedingCoeff=0.3402;MQ=40.64;MQ0=0;MQRankSum=-1.732;QD=14.24;ReadPosRankSum=1.676;VQSLOD=2.5642;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	1/1:0,4:4:9.15:52,9,0	0/0:2,0:1:3.01:0,3,57	./.	1/1:0,15:15:33.65:208,34,0	./.	1/1:0,1:1:2.96:19,3,0	./.	./.	1/1:0,3:3:5.94:42,6,0	1/1:0,7:7:17.66:108,18,0	./.	1/1:0,1:1:2.98:21,3,0	./.	./.	./.	./.	./.	./.	1/1:0,5:5:14.74:92,15,0	./.	1/1:0,7:7:20.71:135,21,0	1/1:0,8:8:17.90:114,18,0	./.	1/1:0,8:8:23.55:149,24,0	1/1:0,5:5:8.84:59,9,0	1/1:0,2:2:4.80:27,5,0	1/1:0,3:3:7.49:44,7,0
chr10	9471220	.	T	TATAA	4303.54	PASS	AC=28;AF=1.000;AN=28;BaseQRankSum=-1.519;DP=79;FS=0.000;HRun=0;HaplotypeScore=152.0726;InbreedingCoeff=-0.0665;MQ=39.26;MQ0=1;MQRankSum=-1.679;QD=61.48;ReadPosRankSum=1.679;VQSLOD=6.6061;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	1/1:2,2:4:12.04:276,12,0	./.	./.	1/1:4,11:15:39.08:842,39,0	1/1:1,0:1:3.01:62,3,0	1/1:0,1:1:3.01:75,3,0	./.	./.	1/1:1,2:3:6.01:107,6,0	1/1:2,5:7:21.07:420,21,0	./.	1/1:0,1:1:3.01:76,3,0	./.	./.	./.	./.	./.	./.	1/1:1,4:5:15.05:371,15,0	./.	1/1:1,6:7:17.29:442,17,0	1/1:0,8:8:24.08:523,24,0	./.	1/1:5,3:8:24.08:553,24,0	1/1:3,2:5:9.03:192,9,0	1/1:0,2:2:6.02:147,6,0	1/1:0,3:3:9.03:220,9,0
chr10	9471303	.	T	TA	896.87	PASS	AB=0.891;AC=25;AF=0.500;AN=50;BaseQRankSum=1.712;DP=186;FS=3.557;HRun=1;HaplotypeScore=161.7912;InbreedingCoeff=0.2060;MQ=33.17;MQ0=2;MQRankSum=-1.062;QD=7.23;ReadPosRankSum=2.291;VQSLOD=1.0384;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:3,0:3:3.01:0,3,38	1/1:4,0:4:0.89:2,1,0	0/1:6,0:1:0:0,0,0	0/0:7,0:1:0:0,0,0	0/1:14,0:14:0.69:1,0,1	0/0:7,0:7:8.77:0,9,109	1/1:3,0:3:0.34:1,0,0	0/0:2,2:3:0.47:0,0,1	0/0:5,0:5:2.62:0,3,11	0/1:10,6:16:38.73:326,0,39	1/1:8,2:10:12.49:96,12,0	0/1:2,1:3:23.22:23,0,30	1/1:3,0:3:2.94:18,3,0	1/1:4,1:5:2.63:13,3,0	./.	0/1:7,0:7:6.49:6,0,104	./.	1/1:1,0:1:3.01:44,3,0	0/0:8,1:9:21.75:0,22,244	0/0:9,0:9:15.04:0,15,188	./.	1/1:14,4:18:7.76:100,8,0	1/1:5,0:5:2.17:7,2,0	0/0:1,0:1:0:0,0,0	0/0:16,0:16:7.24:0,7,169	0/1:11,0:11:77.33:77,0,182	0/1:11,5:16:58.03:271,0,58	1/1:2,0:2:5.94:41,6,0
chr10	9471307	.	T	TA	1006.89	PASS	AB=0.817;AC=16;AF=0.364;AN=44;BaseQRankSum=0.428;DP=178;FS=0.000;HRun=1;HaplotypeScore=166.1753;InbreedingCoeff=0.0570;MQ=27.66;MQ0=0;MQRankSum=1.947;QD=8.83;ReadPosRankSum=2.923;VQSLOD=1.2223;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:3,0:3:3.01:0,3,38	0/0:1,2:3:2.04:0,2,6	./.	0/0:6,0:1:2.97:0,3,20	0/1:14,0:14:0.48:1,0,0	0/0:7,0:7:8.77:0,9,109	1/1:3,0:3:0.34:1,0,0	0/0:5,0:4:5.96:0,6,43	0/0:5,0:5:2.62:0,3,11	0/1:11,4:15:1.54:307,0,2	1/1:5,4:9:1.07:47,1,0	0/1:2,1:3:30.48:37,0,30	1/1:2,1:3:2.37:8,2,0	0/0:3,2:5:4.90:0,5,19	./.	0/1:6,2:8:23.04:23,0,98	./.	./.	0/0:11,0:11:15.10:0,15,181	0/0:9,0:9:15.04:0,15,185	./.	0/1:12,4:16:8.62:92,0,9	0/0:3,2:5:0.69:0,1,2	./.	0/1:14,0:14:20.98:21,0,140	0/1:7,4:11:99:143,0,134	0/1:8,8:16:2.01:362,0,2	1/1:1,1:2:6.02:86,6,0
chr10	9471310	.	CTATTTGTTG	C	4134.34	PASS	AB=1.000;AC=40;AF=0.870;AN=46;BaseQRankSum=1.377;DP=150;FS=10.255;HRun=0;HaplotypeScore=150.2203;InbreedingCoeff=0.1950;MQ=27.93;MQ0=0;MQRankSum=2.123;QD=29.53;ReadPosRankSum=-1.993;VQSLOD=2.6120;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:3,0:3:0.47:0,0,1	1/1:1,2:3:6.02:88,6,0	./.	0/0:3,0:1:3:0,3,25	1/1:14,0:14:17.79:175,18,0	0/1:8,0:8:3.98:88,0,4	1/1:3,0:3:9.02:98,9,0	1/1:4,0:4:6.02:77,6,0	1/1:5,0:5:5.06:115,5,0	1/1:5,3:8:18.06:387,18,0	1/1:3,4:7:14.58:223,15,0	1/1:1,1:2:5.75:81,6,0	1/1:2,1:3:6.02:97,6,0	1/1:2,2:4:9.03:138,9,0	1/1:1,0:1:3.01:32,3,0	1/1:6,2:8:24.06:316,24,0	./.	./.	1/1:6,0:6:5.93:54,6,0	0/1:8,0:8:52.20:52,0,105	./.	1/1:9,4:13:35.13:470,35,0	1/1:3,2:5:8.54:102,9,0	./.	1/1:14,0:14:20.79:261,21,0	1/1:8,3:11:32.82:489,33,0	1/1:4,7:11:32.67:645,33,0	1/1:0,2:2:6.02:144,6,0
chr10	9471312	.	ATTTG	A	2364.94	PASS	AB=1.000;AC=40;AF=0.870;AN=46;BaseQRankSum=0.044;DP=138;FS=0.000;HRun=0;HaplotypeScore=147.3260;InbreedingCoeff=0.3729;MQ=27.97;MQ0=0;MQRankSum=0.908;QD=19.23;ReadPosRankSum=1.373;VQSLOD=3.3207;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,0:2:3.01:53,3,0	1/1:3,0:3:3.01:36,3,0	./.	0/0:3,0:1:2.84:0,3,14	1/1:7,3:10:1.31:3,1,0	1/1:5,2:7:9.81:161,10,0	0/1:3,0:3:0:0,0,0	1/1:3,0:3:6.02:82,6,0	1/1:5,0:5:1.91:6,2,0	1/1:6,0:7:18.06:259,18,0	1/1:7,0:7:3.24:76,3,0	1/1:2,0:2:5.95:54,6,0	1/1:3,0:3:3.01:34,3,0	1/1:4,0:4:6.02:69,6,0	0/1:1,0:1:0:0,0,0	1/1:8,0:8:15.05:189,15,0	./.	./.	1/1:3,0:3:6.02:80,6,0	0/0:8,0:8:4.73:0,5,54	./.	1/1:12,0:13:9.03:131,9,0	1/1:5,0:5:5.83:55,6,0	./.	1/1:11,2:13:17.75:264,18,0	1/1:10,0:11:33.05:419,33,0	1/1:10,0:11:33.02:419,33,0	1/1:2,0:2:6.02:76,6,0
chr10	9471322	.	T	TCC	1222.43	PASS	AB=1.000;AC=31;AF=0.674;AN=46;BaseQRankSum=-3.456;DP=170;FS=0.000;HRun=0;HaplotypeScore=197.2688;InbreedingCoeff=0.1017;MQ=27.92;MQ0=3;MQRankSum=0.147;QD=8.55;ReadPosRankSum=4.436;VQSLOD=3.1200;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:5,0:5:10.32:38,0,10	1/1:3,0:3:3.38:10,3,0	./.	0/0:3,0:1:2.98:0,3,21	0/1:11,0:11:5.84:6,0,12	0/1:7,0:7:12.23:31,0,12	0/0:4,0:4:4.06:0,4,11	1/1:3,0:3:5.88:35,6,0	0/1:7,0:7:4.07:9,0,4	1/1:7,1:8:20.97:232,21,0	1/1:7,0:7:7.40:25,7,0	0/1:3,0:3:26.11:29,0,26	1/1:4,0:4:6.82:43,7,0	1/1:4,0:4:5.02:14,5,0	0/0:5,0:5:7.34:0,7,51	0/1:10,0:10:30.65:31,0,33	./.	./.	1/1:5,0:5:11.75:76,12,0	0/0:9,0:9:3.85:0,4,43	./.	1/1:13,1:14:6.97:72,7,0	1/1:6,0:6:7.04:33,7,0	./.	0/1:16,0:16:14.95:88,0,15	1/1:14,1:15:4.43:267,4,0	1/1:12,1:13:8.42:247,8,0	1/1:2,0:2:6.02:77,6,0
chr10	9471340	.	T	TC	5260.78	PASS	AC=44;AF=0.957;AN=46;BaseQRankSum=1.990;DP=185;FS=0.000;HRun=0;HaplotypeScore=164.4198;InbreedingCoeff=0.2547;MQ=27.12;MQ0=7;MQRankSum=-0.097;QD=31.13;ReadPosRankSum=2.414;VQSLOD=4.4028;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,6:6:8.86:81,9,0	1/1:0,3:3:6.02:85,6,0	./.	./.	1/1:1,9:10:17.65:190,18,0	1/1:0,8:8:16.70:278,17,0	1/1:0,4:4:5.78:94,6,0	1/1:1,7:7:17.94:211,18,0	1/1:0,7:7:21.07:310,21,0	1/1:0,7:7:18.06:255,18,0	1/1:0,8:8:13.24:136,13,0	1/1:0,3:3:8.92:96,9,0	1/1:0,4:4:9.03:136,9,0	1/1:1,5:6:11.90:147,12,0	1/1:1,7:8:12.04:151,12,0	1/1:0,11:11:33.11:477,33,0	./.	./.	1/1:2,5:6:15.04:211,15,0	1/1:0,5:5:12.04:147,12,0	./.	1/1:0,13:13:38.94:443,39,0	1/1:0,6:6:14.81:142,15,0	0/0:0,2:2:0:0,0,0	1/1:0,17:17:43.42:535,43,0	1/1:0,14:14:42.03:596,42,0	1/1:1,11:11:33.11:467,33,0	1/1:0,2:2:6.02:72,6,0
chr10	9471345	.	GT	G	2470.04	PASS	AC=46;AF=0.958;AN=48;BaseQRankSum=1.698;DP=182;FS=0.000;HRun=1;HaplotypeScore=158.3845;InbreedingCoeff=0.1615;MQ=26.96;MQ0=9;MQRankSum=-0.219;QD=14.88;ReadPosRankSum=0.589;VQSLOD=3.3089;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,5:5:2.94:24,3,0	1/1:0,2:2:2.97:20,3,0	./.	./.	1/1:0,10:10:1.69:5,2,0	1/1:0,7:7:19.27:118,19,0	1/1:1,4:4:5.66:39,6,0	1/1:0,8:7:17.79:193,18,0	1/1:0,6:6:17.81:124,18,0	1/1:0,6:6:15.04:168,15,0	1/1:1,6:7:5.16:21,5,0	1/1:0,3:3:6.01:64,6,0	1/1:0,4:4:9.03:113,9,0	1/1:0,6:6:8.29:47,8,0	1/1:1,8:9:15.89:144,16,0	1/1:0,10:10:28.29:169,28,0	./.	./.	1/1:2,6:7:12.99:185,13,0	1/1:0,5:5:2.99:25,3,0	1/1:1,1:2:2.98:22,3,0	1/1:1,13:13:8.13:46,8,0	1/1:0,6:6:1.98:7,2,0	0/0:0,2:2:0:0,0,0	1/1:1,15:16:27.23:164,27,0	1/1:0,14:14:41.80:490,42,0	1/1:1,10:10:29.95:302,30,0	1/1:0,2:2:6.01:57,6,0
chr10	9471379	.	GTGTGTGTGGT	G	2387.93	PASS	AB=1.000;AC=42;AF=0.955;AN=44;BaseQRankSum=2.115;DP=119;FS=0.000;HRun=0;HaplotypeScore=124.1054;InbreedingCoeff=-0.1232;MQ=27.52;MQ0=9;MQRankSum=0.846;QD=20.76;ReadPosRankSum=1.527;VQSLOD=2.8033;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,2:6:6.02:121,6,0	./.	./.	./.	./.	1/1:5,0:5:12.04:146,12,0	1/1:5,0:4:9.03:107,9,0	1/1:7,0:7:14.03:204,14,0	1/1:10,0:10:15.03:194,15,0	1/1:3,0:3:9.03:117,9,0	0/1:5,0:5:2.25:30,0,2	1/1:4,0:4:6:60,6,0	1/1:4,0:4:9.03:107,9,0	1/1:3,0:3:6.02:67,6,0	0/1:12,0:12:24.79:113,0,25	1/1:3,0:3:6.01:62,6,0	1/1:3,0:2:3.01:38,3,0	1/1:6,0:5:10:154,10,0	1/1:5,1:4:12.04:214,12,0	1/1:3,1:3:5.75:98,6,0	./.	1/1:9,0:8:14.98:159,15,0	1/1:3,0:3:3.01:35,3,0	1/1:5,0:5:2.91:34,3,0	1/1:1,1:2:3.01:92,3,0	1/1:2,0:2:6.02:79,6,0	1/1:7,0:6:15.05:245,15,0	./.
chr10	9471387	.	GGT	G	2405.67	PASS	AB=0.500;AC=43;AF=0.977;AN=44;BaseQRankSum=1.477;DP=121;FS=0.000;HRun=0;HaplotypeScore=107.5108;InbreedingCoeff=-0.0971;MQ=27.72;MQ0=7;MQRankSum=0.255;QD=20.74;ReadPosRankSum=1.681;VQSLOD=3.9165;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,5:7:6.02:80,6,0	./.	./.	./.	./.	1/1:1,4:5:12.04:146,12,0	1/1:1,4:4:9.03:107,9,0	1/1:0,10:10:24.08:326,24,0	1/1:1,5:6:15.04:180,15,0	1/1:0,3:3:9.03:117,9,0	0/1:0,5:5:2.37:30,0,2	1/1:0,4:4:6:60,6,0	1/1:0,4:4:9.03:107,9,0	1/1:0,3:3:6.02:67,6,0	1/1:3,9:12:21.06:263,21,0	1/1:0,4:4:6.01:62,6,0	1/1:1,2:2:3.01:38,3,0	1/1:1,4:5:12.04:158,12,0	1/1:3,3:4:12.04:165,12,0	1/1:2,2:3:3.01:44,3,0	./.	1/1:1,7:7:14.41:149,14,0	1/1:0,3:3:3.01:35,3,0	1/1:0,6:6:3.01:34,3,0	1/1:1,2:3:3.01:43,3,0	1/1:0,3:3:6.02:79,6,0	1/1:1,5:6:15.05:193,15,0	./.
chr10	9472127	.	ATTTTGC	A	3585.70	PASS	AB=0.831;AC=33;AF=0.611;AN=54;BaseQRankSum=1.362;DP=262;FS=10.978;HRun=0;HaplotypeScore=283.3398;InbreedingCoeff=-0.2655;MQ=36.55;MQ0=1;MQRankSum=-0.730;QD=14.23;ReadPosRankSum=-0.717;VQSLOD=1.2123;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,3:13:19.14:146,19,0	0/1:2,0:2:12.02:12,0,15	0/0:1,0:1:3.01:0,3,62	0/0:2,0:1:3.01:0,3,59	0/1:9,6:15:16.59:179,0,17	0/1:7,2:8:46.87:61,0,47	0/1:4,2:6:38.89:75,0,39	0/1:13,0:13:68.04:68,0,189	1/1:3,9:12:15.54:378,16,0	0/1:12,7:19:99:422,0,135	1/1:1,5:6:15.46:164,15,0	0/1:6,3:9:14.73:137,0,15	0/1:6,1:7:0.18:80,0,0	1/1:7,3:11:9.08:134,9,0	0/1:10,0:10:7.89:9,0,8	1/1:3,5:8:21.63:259,22,0	0/1:12,4:16:29.69:89,0,30	0/1:6,1:7:12.08:47,0,12	0/0:6,0:6:2.83:0,3,159	0/1:13,5:18:9.76:192,0,10	./.	1/1:7,8:15:28.26:305,28,0	1/1:4,6:10:5.91:158,6,0	0/1:9,2:11:36.67:37,0,56	1/1:3,6:9:4.72:231,5,0	0/1:8,4:12:93.77:196,0,94	0/1:7,3:10:99:132,0,126	1/1:3,1:4:1.85:75,2,0
chr10	9472150	.	CCTG	C	437.62	PASS	AB=0.681;AC=23;AF=0.426;AN=54;BaseQRankSum=8.747;DP=209;FS=3.024;HRun=0;HaplotypeScore=276.1153;InbreedingCoeff=-0.2044;MQ=37.87;MQ0=0;MQRankSum=-0.675;QD=2.68;ReadPosRankSum=9.105;VQSLOD=1.4582;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:3,3:6:1.98:2,0,48	0/0:4,0:4:8.96:0,9,104	0/0:1,0:1:2.96:0,3,19	0/0:1,0:1:2.94:0,3,18	0/0:6,6:12:5.35:0,5,152	1/1:6,2:7:4.71:16,5,0	0/1:3,2:5:2.45:2,0,57	0/0:8,0:8:23.77:0,24,251	0/1:3,9:12:27.16:85,0,27	0/1:7,7:14:99:159,0,185	0/1:0,5:5:15.79:16,0,17	0/1:5,3:8:17.41:24,0,17	1/1:2,1:3:2.04:6,2,0	0/1:8,3:11:10.50:11,0,83	0/0:6,0:6:2.96:0,3,19	0/1:4,5:9:60.70:61,0,61	0/1:5,4:9:4.13:4,0,17	1/1:2,1:3:0.88:2,1,0	0/0:6,0:6:17.83:0,18,175	0/1:10,5:15:7.74:8,0,122	./.	0/1:6,8:14:2.33:31,0,2	0/1:2,6:8:12.34:12,0,78	0/0:5,3:8:6.02:0,6,75	1/1:1,6:7:15.11:57,15,0	0/1:7,4:11:54.41:54,0,95	0/1:9,3:12:19.73:20,0,213	0/1:2,1:3:11.54:12,0,52
chr10	9472156	.	TTCATTG	T	1830.64	PASS	AB=0.653;AC=26;AF=0.500;AN=52;BaseQRankSum=7.809;DP=145;FS=3.604;HRun=0;HaplotypeScore=219.5911;InbreedingCoeff=-0.2849;MQ=41.23;MQ0=0;MQRankSum=-0.029;QD=13.97;ReadPosRankSum=8.261;VQSLOD=2.2073;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:2,3:5:25.20:39,0,25	0/0:3,0:3:6.36:0,6,61	0/0:1,0:1:2.99:0,3,23	./.	0/1:4,6:10:83.95:84,0,105	1/1:1,2:3:2.06:49,2,0	0/1:3,2:5:37.81:38,0,56	0/0:3,0:3:7.04:0,7,28	0/1:3,9:12:2.85:239,0,3	0/1:5,7:12:25.86:290,0,26	1/1:0,5:5:5.29:97,5,0	0/1:4,3:7:19.35:80,0,19	0/1:1,1:2:0.95:21,0,1	0/1:4,3:7:26.96:75,0,27	0/0:1,0:1:2.88:0,3,15	0/1:4,5:9:54.26:154,0,54	1/1:0,4:4:2.10:27,2,0	1/1:0,1:1:2.97:20,3,0	0/0:1,0:1:2.60:0,3,10	0/1:3,5:8:81.32:81,0,104	./.	1/1:1,8:9:0.25:183,0,0	0/1:2,6:8:52.12:86,0,52	0/0:1,3:4:3:0,3,32	1/1:1,6:7:13.28:166,13,0	0/1:2,4:6:13.76:128,0,14	0/1:5,3:8:85.35:85,0,105	0/1:2,1:3:21.60:31,0,22
chr10	9472987	.	CGG	C	6144.13	PASS	AB=1.000;AC=50;AF=0.893;AN=56;BaseQRankSum=-2.327;DP=475;FS=15.119;HRun=4;HaplotypeScore=85.4040;InbreedingCoeff=0.5338;MQ=63.75;MQ0=31;MQRankSum=-2.445;QD=14.77;ReadPosRankSum=3.953;VQSLOD=0.9868;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:28:24.27:349,0,24	1/1:11,0:11:29.93:241,30,0	0/0:30,0:17:41.86:0,42,354	0/0:29,0:16:44.71:0,45,361	0/1:17,0:16:4.41:246,0,4	1/1:10,0:10:18.73:174,19,0	1/1:33,0:31:58.96:499,59,0	1/1:14,0:13:38.95:337,39,0	1/1:8,1:9:26.98:255,27,0	1/1:25,3:27:58.55:400,59,0	1/1:13,3:10:17.37:136,17,0	1/1:13,0:13:29.77:223,30,0	1/1:11,2:13:32.91:270,33,0	1/1:8,1:9:26.27:192,26,0	1/1:10,6:10:26.49:203,26,0	1/1:8,0:7:0.77:77,1,0	1/1:21,1:21:53.69:408,54,0	1/1:19,0:19:18.29:267,18,0	1/1:15,0:15:40.79:344,41,0	1/1:15,2:15:26.69:247,27,0	1/1:33,0:32:53.66:412,54,0	1/1:10,0:10:8.92:65,9,0	1/1:11,0:8:13.57:91,14,0	1/1:25,1:15:7.86:61,8,0	1/1:15,0:14:25.74:208,26,0	1/1:12,0:12:34.50:285,34,0	1/1:6,0:6:5.96:46,6,0	1/1:5,0:5:14.85:111,15,0
chr10	9472988	.	GGGGTGT	G	6620.87	PASS	AB=1.000;AC=43;AF=0.768;AN=56;BaseQRankSum=-5.500;DP=474;FS=19.740;HRun=0;HaplotypeScore=112.4652;InbreedingCoeff=0.0738;MQ=62.74;MQ0=31;MQRankSum=-1.251;QD=15.92;ReadPosRankSum=3.403;VQSLOD=2.5351;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:28:99:308,0,283	1/1:8,2:12:32.03:391,32,0	0/0:29,0:16:41.70:0,42,354	0/0:29,0:16:44.71:0,45,361	0/1:17,0:16:99:242,0,119	0/1:11,0:11:78.77:140,0,79	0/1:33,0:31:99:376,0,170	1/1:14,0:13:38.95:337,39,0	0/1:10,0:10:15.19:130,0,15	1/1:28,0:27:58.56:420,59,0	1/1:14,0:8:17.38:177,17,0	1/1:11,2:13:29.81:315,30,0	1/1:12,0:13:32.97:400,33,0	1/1:9,0:9:26.33:282,26,0	1/1:16,0:10:26.90:337,27,0	0/1:8,0:7:36.81:37,0,150	1/1:21,0:21:53.47:464,53,0	0/1:17,0:18:99:239,0,203	1/1:15,0:15:40.79:344,41,0	1/1:16,0:15:32.35:328,32,0	1/1:31,0:30:51.15:415,51,0	1/1:1,9:10:8.99:156,9,0	0/1:13,0:10:48.12:49,0,48	1/1:25,0:15:7.96:61,8,0	0/1:15,0:14:99:138,0,123	1/1:12,0:12:34.51:333,35,0	1/1:0,0:6:5.97:73,6,0	1/1:5,0:5:14.98:130,15,0
chr10	9472989	.	G	GTGC	2135.85	PASS	AB=0.982;AC=19;AF=0.339;AN=56;BaseQRankSum=-0.852;DP=500;FS=5.478;HRun=0;HaplotypeScore=116.0487;InbreedingCoeff=0.3489;MQ=60.48;MQ0=35;MQRankSum=-3.195;QD=9.98;ReadPosRankSum=-6.215;VQSLOD=0.9920;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:71.47:0,71,633	0/1:13,0:13:18.12:18,0,118	0/0:28,0:15:42.62:0,43,769	0/0:29,0:16:45.07:0,45,713	0/0:18,0:17:47.48:0,47,400	0/1:12,0:12:2.43:2,0,143	0/0:33,0:31:23.33:0,23,515	0/1:20,0:19:28.40:28,0,250	0/1:12,0:12:4.07:4,0,203	1/1:7,23:29:61.96:1207,62,0	1/1:9,1:8:18.06:312,18,0	0/0:11,0:11:30.90:0,31,305	0/1:15,0:15:9:9,0,222	0/0:8,0:9:24.92:0,25,240	1/1:12,2:10:25.40:321,25,0	0/1:7,0:7:1.69:2,0,112	0/0:25,0:24:50.75:0,51,468	0/1:17,0:18:14.79:15,0,262	0/0:15,0:15:41.35:0,41,324	0/0:17,0:15:31.48:0,31,263	0/0:33,0:32:53.77:0,54,498	0/1:9,0:9:12.76:13,0,16	1/1:9,4:11:16.19:236,16,0	1/1:12,7:15:11.25:145,11,0	0/0:16,0:15:5.99:0,6,200	0/0:12,0:12:18.63:0,19,218	0/0:6,0:6:2.97:0,3,20	0/1:5,0:5:0.09:0,0,96
chr10	9472993	.	GT	G	866.78	PASS	AB=0.968;AC=16;AF=0.286;AN=56;BaseQRankSum=8.972;DP=539;FS=1.786;HRun=1;HaplotypeScore=108.4140;InbreedingCoeff=0.4756;MQ=53.90;MQ0=49;MQRankSum=-6.827;QD=5.16;ReadPosRankSum=-0.098;VQSLOD=0.2746;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:36:87.10:0,87,1157	0/1:10,0:10:26.44:26,0,100	0/0:27,0:14:39.58:0,40,483	0/0:25,0:12:36.10:0,36,434	0/0:22,0:21:51.17:0,51,689	0/0:14,0:14:35.85:0,36,462	0/0:31,0:28:72.21:0,72,934	0/0:25,0:21:44.95:0,45,476	0/0:13,0:13:32.97:0,33,314	1/1:28,1:26:51.90:582,52,0	1/1:10,5:8:14.98:138,15,0	0/0:13,0:13:18.43:0,18,327	0/0:14,1:15:2.50:0,2,242	0/1:12,0:11:2.77:3,0,246	1/1:10,6:10:23.02:158,23,0	0/0:10,0:9:18.06:0,18,240	0/0:24,0:22:28.35:0,28,550	0/0:19,0:19:36.28:0,36,583	0/0:21,0:21:44.58:0,45,487	0/1:17,2:17:5.52:6,0,290	0/0:43,0:39:36.18:0,36,640	1/1:10,0:9:4.26:13,4,0	0/1:17,2:13:29.06:37,0,29	1/1:21,5:14:3.64:65,4,0	0/0:18,0:16:40.67:0,41,484	0/0:13,0:14:33.50:0,34,385	0/1:6,0:6:0.58:1,0,13	0/1:6,0:6:2.95:3,0,137
chr10	9473046	.	A	AT	1777.79	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=1.115;DP=562;FS=10.744;HRun=7;HaplotypeScore=112.8553;InbreedingCoeff=0.9550;MQ=52.21;MQ0=33;MQRankSum=-4.993;QD=19.54;ReadPosRankSum=-4.237;VQSLOD=1.4592;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:28:74.03:0,74,681	0/0:9,0:9:17.82:0,18,164	0/0:44,0:7:14.09:0,14,129	0/0:33,0:5:9:0,9,80	0/0:14,0:14:32.55:0,33,318	0/0:17,0:16:43.89:0,44,411	0/0:41,0:39:92.75:0,93,883	0/0:16,0:15:39.03:0,39,368	0/0:16,0:15:35.88:0,36,328	1/1:9,7:16:41.87:461,42,0	1/1:3,8:10:21.02:238,21,0	0/0:16,0:15:26.49:0,26,258	0/0:20,0:20:50.18:0,50,480	0/0:16,0:15:38.88:0,39,347	1/1:3,17:20:33.06:382,33,0	0/0:16,0:15:33.74:0,34,321	0/0:21,0:18:44.80:0,45,426	0/0:19,0:17:38.89:0,39,359	0/0:15,0:15:42.04:0,42,405	0/0:17,0:16:30.59:0,31,303	0/0:34,0:30:49.44:0,49,505	0/0:18,0:18:38.80:0,39,365	1/1:4,11:15:31.75:329,32,0	1/1:3,26:27:53.02:542,53,0	0/0:24,0:22:53.16:0,53,510	0/0:15,0:15:39.05:0,39,371	0/0:16,0:15:42.05:0,42,397	0/0:4,0:4:6.01:0,6,58
chr10	9475004	.	TG	T	15064.11	PASS	AB=0.540;AC=35;AF=0.625;AN=56;BaseQRankSum=12.185;DP=689;FS=9.232;HRun=2;HaplotypeScore=79.4239;InbreedingCoeff=0.9236;MQ=86.92;MQ0=0;MQRankSum=-3.842;QD=34.87;ReadPosRankSum=3.414;VQSLOD=5.0207;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,32:33:81.26:1052,81,0	1/1:1,11:12:30.10:390,30,0	0/0:30,0:30:83.73:0,84,1098	0/0:24,0:24:65.91:0,66,860	1/1:2,23:25:69.22:894,69,0	1/1:0,23:23:66.21:857,66,0	1/1:0,25:25:69.22:896,69,0	1/1:1,32:33:96.31:1246,96,0	1/1:0,26:26:72.23:935,72,0	0/0:27,0:27:78.20:0,78,1136	0/0:24,0:24:72.24:0,72,1078	1/1:1,20:21:54.18:701,54,0	1/1:0,30:30:81.26:1052,81,0	1/1:0,30:30:72.23:935,72,0	0/0:26,0:26:75.25:0,75,1123	1/1:1,33:34:90.29:1169,90,0	1/1:1,27:28:78.25:1013,78,0	1/1:0,16:16:39.13:506,39,0	0/0:23,0:23:63.20:0,63,923	0/0:29,0:29:81.27:0,81,1213	0/0:28,0:28:84.27:0,84,1239	1/1:1,20:21:63.20:812,63,0	0/0:28,0:28:84.28:0,84,1256	0/0:18,0:18:54.18:0,54,803	1/1:0,15:15:42.14:545,42,0	0/1:4,23:27:98.34:815,0,98	1/1:0,24:24:69.22:896,69,0	1/1:0,9:9:27.09:350,27,0
chr10	9475443	.	G	GC	25402.34	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-14.050;DP=700;FS=9.200;HRun=0;HaplotypeScore=60.7734;InbreedingCoeff=0.9995;MQ=84.78;MQ0=0;MQRankSum=-7.282;QD=43.80;ReadPosRankSum=4.743;VQSLOD=4.7687;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,37:37:90.31:1439,90,0	1/1:0,13:13:36.12:576,36,0	0/0:22,0:22:63.14:0,63,846	0/0:23,0:23:63.64:0,64,821	1/1:1,30:31:90.31:1439,90,0	1/1:1,41:42:99:1775,111,0	1/1:0,18:18:45.15:719,45,0	1/1:0,27:27:78.24:1193,78,0	1/1:1,20:21:60.20:952,60,0	1/1:3,31:34:93.30:1447,93,0	1/1:0,30:30:84.29:1339,84,0	1/1:0,20:20:60.20:959,60,0	1/1:0,18:18:54.18:863,54,0	1/1:0,24:24:63.21:1007,63,0	1/1:2,33:35:87.30:1391,87,0	1/1:1,23:24:66.22:1050,66,0	1/1:1,26:27:69.24:1103,69,0	1/1:0,15:15:45.15:719,45,0	0/0:20,0:20:57.19:0,57,797	0/0:32,0:32:93.28:0,93,1266	0/0:23,0:23:66.22:0,66,921	1/1:0,26:26:75.26:1197,75,0	1/1:1,17:18:48.05:767,48,0	1/1:0,30:30:90.31:1439,90,0	1/1:0,26:26:69.24:1103,69,0	1/1:0,32:32:96.31:1510,96,0	1/1:0,24:24:66.23:1055,66,0	1/1:0,7:8:24.06:360,24,0
chr10	9479416	.	T	TA	3629.12	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=7.726;DP=613;FS=0.000;HRun=8;HaplotypeScore=110.1299;InbreedingCoeff=0.8245;MQ=66.55;MQ0=4;MQRankSum=6.998;QD=11.34;ReadPosRankSum=0.682;VQSLOD=2.4704;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:66.01:0,66,598	1/1:15,0:15:18.99:202,19,0	0/0:14,0:9:2.45:0,2,155	0/1:9,0:6:0.07:0,0,71	0/0:29,0:29:78.01:0,78,704	0/0:30,0:30:66:0,66,596	0/0:13,0:13:36.02:0,36,329	0/0:29,0:28:59.69:0,60,541	0/0:27,0:27:68.99:0,69,625	1/1:20,0:20:44.96:410,45,0	1/1:28,0:28:38.52:620,39,0	1/1:18,0:18:0.94:2,1,0	1/1:26,0:26:5.35:32,5,0	1/1:18,0:18:1.83:3,2,0	1/1:27,0:27:11.88:82,12,0	0/0:15,0:15:42:0,42,377	1/1:24,1:25:3.91:21,4,0	0/0:19,0:19:52.08:0,52,446	0/0:22,0:22:50.97:0,51,459	0/0:25,0:25:63.03:0,63,576	0/0:15,0:15:42.02:0,42,384	1/1:35,0:35:79.09:871,79,0	1/1:17,1:18:23.88:263,24,0	1/1:6,14:20:27.08:312,27,0	0/0:30,0:30:87.01:0,87,789	1/1:26,0:26:58.11:659,58,0	1/1:32,0:32:16.66:149,17,0	1/1:3,0:3:0.94:2,1,0
chr10	9479419	.	A	AAAAAAAC	4624.75	PASS	AB=1.000;AC=18;AF=0.321;AN=56;BaseQRankSum=0.555;DP=618;FS=2.363;HRun=0;HaplotypeScore=166.8604;InbreedingCoeff=0.4936;MQ=64.58;MQ0=5;MQRankSum=7.224;QD=16.06;ReadPosRankSum=0.586;VQSLOD=4.4812;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:66.08:0,66,884	0/1:15,0:15:58.05:177,0,58	0/0:13,0:8:0.82:0,1,143	0/1:8,0:5:0.07:0,0,71	0/0:29,0:29:78.11:0,78,985	0/0:30,0:30:69.06:0,69,866	0/0:12,0:12:36.03:0,36,372	0/0:31,0:29:59.52:0,60,541	0/0:26,0:26:75.11:0,75,1054	1/1:3,15:22:48.15:935,48,0	1/1:4,24:30:38.69:835,39,0	0/0:18,0:18:6.01:0,6,61	0/1:26,0:25:9.96:10,0,187	0/0:17,0:17:7.90:0,8,88	1/1:4,24:30:12.47:362,12,0	0/0:16,0:16:42.01:0,42,421	0/1:24,0:24:10.78:11,0,72	0/0:19,0:19:54.08:0,54,653	0/0:21,0:21:50.34:0,50,568	0/0:24,0:24:66.08:0,66,844	0/0:14,0:14:42.06:0,42,540	1/1:33,0:33:38.84:824,39,0	1/1:4,17:25:26.83:369,27,0	1/1:20,0:20:27.55:389,28,0	0/0:32,0:32:93.12:0,93,1217	0/1:25,0:25:8.25:594,0,8	0/1:30,0:30:99:119,0,128	0/0:3,0:3:6.02:0,6,82
chr10	9479420	.	AAAAACAAAAAC	A	5837.38	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=6.009;DP=613;FS=0.000;HRun=0;HaplotypeScore=193.1737;InbreedingCoeff=0.5364;MQ=64.62;MQ0=5;MQRankSum=3.763;QD=18.65;ReadPosRankSum=-0.306;VQSLOD=3.8699;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:66.99:0,67,1562	1/1:1,14:15:24.07:441,24,0	0/0:13,0:8:2.45:0,2,155	0/0:8,0:5:0.04:0,0,71	0/0:29,0:29:84.15:0,84,1970	0/0:29,0:29:69.09:0,69,1518	0/0:13,0:13:39.07:0,39,770	0/0:30,0:28:59.95:0,60,541	0/0:26,0:26:75.19:0,75,2299	0/1:21,0:21:99:210,0,886	0/1:29,0:29:99:415,0,423	1/1:0,18:18:6.02:202,6,0	1/1:2,24:25:17.88:533,18,0	1/1:1,16:17:8.90:303,9,0	0/1:30,0:30:5.35:5,0,523	0/0:16,0:16:45.03:0,45,689	1/1:2,21:23:8.99:222,9,0	0/0:20,0:20:48.81:0,49,1138	0/0:20,0:20:54.02:0,54,1103	0/0:24,0:24:69.12:0,69,1853	0/0:14,0:14:42.08:0,42,1171	1/1:0,32:32:87.19:1274,87,0	0/1:25,0:25:99:165,0,564	0/1:19,0:19:99:179,0,280	0/0:32,0:32:96.19:0,96,2539	1/1:0,25:25:75.13:1026,75,0	1/1:1,29:30:27.56:658,28,0	1/1:0,3:3:6.02:202,6,0
chr10	9481202	.	A	AT	6985.08	PASS	AC=54;AF=1.000;AN=54;BaseQRankSum=-0.348;DP=522;FS=4.227;HRun=1;HaplotypeScore=425.6224;InbreedingCoeff=-0.0083;MQ=38.35;MQ0=0;MQRankSum=-1.761;QD=13.38;ReadPosRankSum=3.539;VQSLOD=3.0354;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:36,3:38:74.78:504,75,0	1/1:10,0:10:18.25:95,18,0	1/1:2,0:3:2.09:39,2,0	./.	1/1:23,0:23:42.61:323,43,0	1/1:11,1:12:24.98:180,25,0	1/1:18,0:18:38.64:190,39,0	1/1:13,1:14:41.57:302,42,0	1/1:22,0:22:27.73:141,28,0	1/1:26,0:26:52.33:455,52,0	1/1:19,0:19:41.96:240,42,0	1/1:19,0:19:42.58:240,43,0	1/1:23,0:23:47.69:299,48,0	1/1:21,0:21:46.53:247,47,0	1/1:30,0:30:60.30:358,60,0	1/1:28,0:28:68.50:353,69,0	1/1:13,0:13:30.57:171,31,0	1/1:9,0:9:26.39:175,26,0	1/1:13,1:14:35.81:293,36,0	1/1:22,1:23:50.93:281,51,0	1/1:9,0:9:13.67:72,14,0	1/1:24,1:25:49.84:329,50,0	1/1:21,2:23:50.43:316,50,0	1/1:13,1:14:27.86:173,28,0	1/1:23,0:23:50.84:265,51,0	1/1:22,0:22:58.67:394,59,0	1/1:33,0:33:52.31:402,52,0	1/1:7,0:7:17.86:147,18,0
chr10	9482295	.	GC	G	15639.58	PASS	AB=0.529;AC=45;AF=0.804;AN=56;BaseQRankSum=8.005;DP=590;FS=2.274;HRun=2;HaplotypeScore=124.4318;InbreedingCoeff=0.8966;MQ=60.09;MQ0=3;MQRankSum=1.780;QD=33.93;ReadPosRankSum=4.548;VQSLOD=4.4262;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,37:40:73.27:1127,73,0	1/1:0,6:6:18.06:233,18,0	0/0:24,0:20:57.17:0,57,817	0/0:26,0:20:54.17:0,54,762	1/1:0,13:13:36.07:447,36,0	1/1:0,22:22:63.20:810,63,0	1/1:0,21:21:60.20:779,60,0	1/1:2,21:21:57.18:739,57,0	1/1:0,19:19:54.18:700,54,0	1/1:2,16:18:48.15:613,48,0	1/1:0,10:10:30.10:390,30,0	1/1:0,19:19:51.17:660,51,0	1/1:0,24:24:69.22:895,69,0	1/1:1,25:26:75.24:972,75,0	1/1:0,28:28:81.26:1051,81,0	1/1:0,15:15:33.11:428,33,0	1/1:2,32:34:73.31:1113,73,0	0/1:3,24:27:8.77:713,0,9	0/0:16,0:16:45.15:0,45,669	0/0:14,0:14:36.10:0,36,499	0/0:49,0:49:99:0,147,2163	1/1:1,19:20:57.19:739,57,0	1/1:0,10:10:24.08:310,24,0	1/1:1,18:19:51.17:662,51,0	1/1:0,15:15:36.12:467,36,0	1/1:0,18:18:54.18:701,54,0	1/1:0,24:24:60.19:778,60,0	1/1:1,9:10:24.08:311,24,0
chr10	9482724	.	T	TG	11069.24	PASS	AB=0.769;AC=36;AF=0.643;AN=56;BaseQRankSum=-12.830;DP=597;FS=1.528;HRun=7;HaplotypeScore=58.0651;InbreedingCoeff=0.8278;MQ=69.01;MQ0=0;MQRankSum=-0.616;QD=27.88;ReadPosRankSum=1.201;VQSLOD=5.5747;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,28:35:87.27:1046,87,0	1/1:0,8:8:18.05:216,18,0	0/0:17,0:18:22.19:0,22,217	0/1:7,0:7:30.04:30,0,72	1/1:2,23:25:66.20:796,66,0	1/1:2,27:29:72.02:869,72,0	1/1:7,20:27:54.17:652,54,0	1/1:5,13:18:33.79:429,34,0	1/1:5,16:21:48.15:580,48,0	0/0:21,0:21:51.07:0,51,492	0/0:25,0:25:69.10:0,69,662	1/1:1,20:21:57.17:689,57,0	1/1:1,16:17:36.11:435,36,0	1/1:5,16:21:42.13:507,42,0	0/0:22,0:22:54.08:0,54,521	1/1:2,19:21:51.16:616,51,0	1/1:3,25:28:63.19:761,63,0	1/1:2,24:26:63.19:761,63,0	0/0:27,0:27:69.11:0,69,666	0/0:29,1:30:41.85:0,42,678	0/0:29,0:29:78.10:0,78,747	1/1:2,19:21:48.15:579,48,0	0/0:21,0:21:60.10:0,60,579	0/0:7,0:7:5.17:0,5,101	1/1:3,18:21:30.34:626,30,0	1/1:2,18:20:54.17:651,54,0	1/1:1,23:23:66.20:797,66,0	0/1:1,6:7:12.36:30,0,12
chr10	9482992	.	A	ACC	20117.77	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-11.829;DP=705;FS=7.991;HRun=4;HaplotypeScore=91.3646;InbreedingCoeff=0.9926;MQ=72.72;MQ0=2;MQRankSum=-2.982;QD=35.48;ReadPosRankSum=2.893;VQSLOD=3.9178;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,48:53:99:1817,102,0	1/1:1,8:9:21.07:378,21,0	0/0:30,0:25:44.65:0,45,501	0/0:30,0:26:32.25:0,32,585	1/1:2,17:21:47.88:794,48,0	1/1:2,19:21:45.15:810,45,0	1/1:3,22:25:39.13:702,39,0	1/1:7,37:44:99:1520,100,0	1/1:1,36:37:78.27:1404,78,0	1/1:1,20:22:60.15:960,60,0	1/1:0,20:21:45.15:806,45,0	1/1:1,22:23:48.16:864,48,0	1/1:1,26:27:48.22:1012,48,0	1/1:1,16:17:30.10:539,30,0	1/1:5,20:26:43.33:958,43,0	1/1:0,29:30:66.23:1189,66,0	1/1:6,31:37:65.87:1338,66,0	1/1:1,10:11:15.05:270,15,0	0/0:20,0:20:57.16:0,57,722	0/0:32,0:32:90.23:0,90,1123	0/0:25,0:25:69.20:0,69,890	1/1:3,13:16:30.10:540,30,0	1/1:0,17:19:32.98:594,33,0	1/1:3,28:30:48.16:864,48,0	1/1:1,14:15:24.08:432,24,0	1/1:1,19:20:57.18:989,57,0	1/1:3,25:29:57.20:1026,57,0	1/1:2,10:12:18.06:312,18,0
chr10	9484363	.	A	AG	23073.96	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=11.843;DP=631;FS=6.898;HRun=0;HaplotypeScore=102.3484;InbreedingCoeff=0.9989;MQ=72.25;MQ0=0;MQRankSum=-4.391;QD=44.80;ReadPosRankSum=5.364;VQSLOD=4.1244;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,24:27:72.25:1149,72,0	1/1:0,11:11:30.10:477,30,0	0/0:27,0:27:77.96:0,78,1025	0/0:20,0:20:60.20:0,60,822	1/1:0,36:36:99:1691,108,0	1/1:0,26:26:75.26:1197,75,0	1/1:0,24:24:66.23:1054,66,0	1/1:1,31:31:90.31:1434,90,0	1/1:0,18:18:51.17:813,51,0	1/1:2,36:38:99:1695,111,0	1/1:1,26:27:72.24:1146,72,0	1/1:0,16:16:48.16:766,48,0	1/1:1,26:27:72.20:1150,72,0	1/1:0,22:23:66.22:1040,66,0	1/1:0,29:29:81.28:1293,81,0	1/1:1,17:18:48.16:766,48,0	1/1:0,15:15:45.15:717,45,0	1/1:1,16:17:48.03:703,48,0	0/0:19,0:19:51.13:0,51,662	0/0:29,0:29:84.28:0,84,1173	0/0:21,0:21:57.19:0,57,797	1/1:0,23:23:65.81:986,66,0	1/1:0,15:16:48.16:762,48,0	1/1:0,21:21:57.19:910,57,0	1/1:0,21:21:63.21:1003,63,0	1/1:0,23:23:69.22:1079,69,0	1/1:0,20:20:57.19:908,57,0	1/1:0,7:7:21.07:335,21,0
chr10	9485204	.	CTG	C	13807.26	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=12.569;DP=566;FS=6.858;HRun=0;HaplotypeScore=167.8408;InbreedingCoeff=0.9372;MQ=69.63;MQ0=0;MQRankSum=-4.960;QD=29.63;ReadPosRankSum=5.954;VQSLOD=6.2450;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,34:36:87.13:930,87,0	1/1:0,3:3:9.01:84,9,0	0/0:15,0:15:45.13:0,45,783	0/0:11,0:11:1.93:0,2,361	1/1:1,28:29:81.10:845,81,0	1/1:2,12:14:40.64:412,41,0	1/1:3,17:20:51.46:455,51,0	1/1:2,26:28:81.16:806,81,0	1/1:0,18:18:54.13:585,54,0	1/1:2,19:21:62.17:660,62,0	1/1:1,16:17:51.06:522,51,0	1/1:3,24:27:80.17:845,80,0	1/1:1,29:30:88.64:909,89,0	1/1:3,18:21:61.35:625,61,0	1/1:2,14:16:48.08:487,48,0	1/1:0,19:19:57.11:594,57,0	1/1:2,26:28:75.18:814,75,0	1/1:2,10:12:33.09:367,33,0	0/0:14,0:14:39.13:0,39,785	0/0:22,0:22:63.20:0,63,1212	0/0:38,0:38:99:0,111,2227	1/1:2,11:13:39.06:401,39,0	1/1:3,16:19:54.04:535,54,0	1/1:3,23:26:73.39:768,73,0	1/1:0,14:14:42.08:433,42,0	1/1:1,17:18:54.14:611,54,0	1/1:2,25:27:79.39:803,79,0	1/1:3,7:10:30.07:317,30,0
chr10	9485207	.	AAG	A	13964.39	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=12.524;DP=561;FS=4.470;HRun=0;HaplotypeScore=167.2501;InbreedingCoeff=0.9857;MQ=68.68;MQ0=0;MQRankSum=-6.322;QD=30.10;ReadPosRankSum=6.172;VQSLOD=6.3591;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,34:35:87.13:930,87,0	1/1:0,3:3:9.01:84,9,0	0/0:16,0:16:47.93:0,48,798	0/0:9,0:8:23.40:0,23,350	1/1:2,28:30:84.13:882,84,0	1/1:1,12:13:39.08:409,39,0	1/1:1,17:18:50.99:455,51,0	1/1:4,26:30:87.14:853,87,0	1/1:2,18:20:57.14:621,57,0	1/1:0,19:19:57.13:625,57,0	1/1:1,16:17:51.06:522,51,0	1/1:3,24:27:80.75:854,81,0	1/1:0,29:29:87.10:907,87,0	1/1:2,18:20:60.11:623,60,0	1/1:1,14:15:45.08:463,45,0	1/1:1,19:20:60.11:623,60,0	1/1:2,26:28:75.18:814,75,0	1/1:2,10:12:33.09:367,33,0	0/0:13,0:13:36.12:0,36,732	0/0:23,0:23:69.23:0,69,1308	0/0:36,0:36:99:0,108,2119	1/1:3,11:14:36.06:377,36,0	1/1:2,16:18:54.04:535,54,0	1/1:1,23:24:69.16:742,69,0	1/1:4,14:18:54.09:543,54,0	1/1:1,17:18:54.14:611,54,0	1/1:1,25:26:78.15:802,78,0	1/1:2,8:10:30.07:323,30,0
chr10	9485208	.	AG	A	11064.79	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=12.013;DP=564;FS=3.899;HRun=2;HaplotypeScore=166.9222;InbreedingCoeff=0.9848;MQ=67.85;MQ0=0;MQRankSum=-7.245;QD=23.54;ReadPosRankSum=5.213;VQSLOD=4.6054;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:35,0:35:86.88:742,87,0	1/1:3,0:3:8.93:63,9,0	0/0:16,0:16:42.11:0,42,552	0/0:7,1:7:20.01:0,20,195	1/1:30,0:30:83.46:690,83,0	1/1:13,0:13:38.89:323,39,0	1/1:19,0:19:53.31:360,53,0	1/1:26,4:30:86.71:678,87,0	1/1:20,0:20:56.90:486,57,0	1/1:19,0:19:56.87:492,57,0	1/1:17,0:17:50.62:404,51,0	1/1:26,1:27:78.70:672,79,0	1/1:30,0:30:89.34:729,89,0	1/1:20,0:20:59.78:490,60,0	1/1:15,0:15:44.79:363,45,0	1/1:20,0:20:59.76:487,60,0	1/1:28,0:28:74.90:651,75,0	1/1:13,0:13:33:294,33,0	0/0:13,0:13:36.12:0,36,540	0/0:23,0:23:63.13:0,63,897	0/0:34,0:34:99:0,102,1507	1/1:12,2:14:35.90:299,36,0	1/1:18,0:18:53.49:410,53,0	1/1:24,0:24:68.84:587,69,0	1/1:19,0:19:56.80:461,57,0	1/1:19,0:19:53.98:490,54,0	1/1:27,0:27:80.67:644,81,0	1/1:10,0:10:29.93:248,30,0
chr10	9485514	.	T	TCACA	2147.05	PASS	AB=0.988;AC=30;AF=0.600;AN=50;BaseQRankSum=-4.607;DP=477;FS=13.757;HRun=0;HaplotypeScore=141.0525;InbreedingCoeff=0.3725;MQ=64.88;MQ0=26;MQRankSum=2.047;QD=7.23;ReadPosRankSum=1.059;VQSLOD=2.2703;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:20,0:19:3.82:51,0,4	./.	./.	0/0:34,0:22:3:0,3,31	1/1:19,0:18:5.99:51,6,0	0/1:13,0:13:0.29:0,0,15	0/1:25,0:22:1.19:95,0,1	1/1:13,0:10:10.83:91,11,0	0/1:17,0:16:11.64:20,0,12	1/1:20,0:18:9.43:61,9,0	1/1:9,0:10:6.08:47,6,0	1/1:12,1:13:6.85:247,7,0	1/1:15,1:15:10.57:145,11,0	1/1:19,0:18:20.83:354,21,0	0/0:19,0:19:17.45:0,17,79	0/0:14,0:14:17.82:0,18,121	1/1:20,1:19:11.71:353,12,0	0/1:13,0:10:15.30:43,0,15	0/0:20,0:16:8.01:0,8,72	0/0:15,0:14:13.02:0,13,93	./.	1/1:15,1:14:7.58:145,8,0	0/0:10,0:8:0.47:0,0,1	1/1:22,0:18:1.53:8,2,0	0/0:23,0:22:2.90:0,3,36	0/1:12,0:12:11.83:51,0,12	1/1:15,1:16:29.97:441,30,0	1/1:10,0:10:6.02:103,6,0
chr10	9485531	.	CACA	C	507.42	PASS	AB=0.794;AC=6;AF=0.107;AN=56;BaseQRankSum=1.994;DP=477;FS=0.000;HRun=0;HaplotypeScore=133.3998;InbreedingCoeff=0.1186;MQ=37.77;MQ0=56;MQRankSum=-2.179;QD=6.11;ReadPosRankSum=-0.732;VQSLOD=2.7337;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:22:35.13:0,35,417	0/0:8,0:5:4.88:0,5,28	0/0:7,0:4:12.03:0,12,145	0/0:28,0:12:36.12:0,36,571	0/0:23,0:19:17.75:0,18,201	0/0:21,0:21:32.71:0,33,441	0/0:24,0:20:29.86:0,30,329	0/0:26,0:18:14.38:0,14,419	0/1:17,0:15:5.26:5,0,438	0/0:21,0:14:39.13:0,39,663	0/0:10,0:9:15.52:0,16,220	0/0:16,0:16:26.42:0,26,445	0/0:11,0:9:3.08:0,3,191	0/0:23,0:21:25.98:0,26,335	0/0:14,0:14:41.78:0,42,423	0/0:17,0:16:17.76:0,18,332	0/0:23,0:20:9.26:0,9,389	0/0:13,0:9:17.63:0,18,190	0/1:6,5:10:65.89:268,0,66	0/1:2,9:10:49.76:276,0,50	1/1:11,9:12:5.93:40,6,0	0/0:16,0:13:9.81:0,10,128	0/0:3,0:1:3.01:0,3,71	0/0:23,0:18:17.84:0,18,295	0/0:24,0:21:40.52:0,41,486	0/1:17,0:14:35.53:36,0,440	0/0:16,0:15:35.46:0,35,528	0/0:3,0:3:9.03:0,9,165
chr10	9485548	.	AC	A	2707.29	PASS	AB=0.865;AC=37;AF=0.661;AN=56;BaseQRankSum=0.641;DP=533;FS=0.000;HRun=2;HaplotypeScore=128.2353;InbreedingCoeff=0.1693;MQ=31.55;MQ0=86;MQRankSum=-1.021;QD=6.73;ReadPosRankSum=-0.127;VQSLOD=0.4385;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:21,6:24:8.80:119,0,9	1/1:5,4:7:6.02:76,6,0	0/0:31,2:1:3.01:0,3,40	0/0:49,4:5:6.28:0,6,106	1/1:5,17:18:8.96:79,9,0	1/1:9,5:14:16.33:135,16,0	1/1:8,17:22:30.11:269,30,0	0/1:20,5:19:99:153,0,194	1/1:5,9:12:29.98:374,30,0	0/1:19,4:9:14.29:189,0,14	0/1:7,2:8:28:50,0,28	1/1:12,5:15:7.47:141,7,0	1/1:6,5:9:16.64:150,17,0	1/1:16,11:25:8.10:150,8,0	0/0:9,0:8:15.93:0,16,62	1/1:5,9:13:13.14:200,13,0	0/1:18,3:19:77.86:186,0,78	0/1:16,2:13:44.36:44,0,59	0/0:20,0:15:12.51:0,13,188	0/0:16,0:15:3.74:0,4,85	0/1:24,0:14:0:0,0,0	1/1:10,4:10:5.96:50,6,0	1/1:5,0:2:2.04:6,2,0	1/1:10,13:16:8.56:73,9,0	1/1:5,10:13:7.84:76,8,0	0/1:13,5:13:80.46:93,0,80	0/1:14,2:15:45.52:125,0,46	1/1:5,2:5:12.03:140,12,0
chr10	9485549	.	C	CA	3006.36	PASS	AB=0.929;AC=38;AF=0.679;AN=56;BaseQRankSum=1.280;DP=549;FS=2.093;HRun=1;HaplotypeScore=144.3132;InbreedingCoeff=0.1070;MQ=31.13;MQ0=86;MQRankSum=-0.523;QD=7.07;ReadPosRankSum=-0.755;VQSLOD=0.4684;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:27,3:26:7.46:134,0,7	1/1:9,1:7:6.02:77,6,0	0/0:37,0:1:3.01:0,3,40	0/0:54,0:5:6.16:0,6,106	1/1:21,0:17:5.99:58,6,0	1/1:13,1:14:18.02:134,18,0	1/1:25,0:23:33.17:292,33,0	0/1:23,0:18:99:152,0,187	1/1:13,1:13:29.82:392,30,0	0/1:19,3:8:14.28:209,0,14	0/1:7,2:8:28.26:75,0,28	1/1:16,1:15:10.34:163,10,0	1/1:12,1:11:16.90:147,17,0	1/1:22,5:25:19.46:176,19,0	0/0:14,0:13:16.27:0,16,65	1/1:14,0:13:16.23:138,16,0	0/1:20,3:20:58.88:226,0,59	0/1:17,0:13:57.04:63,0,57	0/0:19,0:14:9.85:0,10,197	0/1:16,0:15:12.06:12,0,63	0/1:24,0:14:0:0,0,0	1/1:13,2:11:6.43:50,6,0	1/1:3,3:3:3.01:48,3,0	1/1:19,5:17:8.97:134,9,0	1/1:15,0:13:7.80:54,8,0	0/1:18,0:13:60.81:103,0,61	0/1:14,3:15:22.33:182,0,22	1/1:8,0:6:14.87:154,15,0
chr10	9485551	.	A	ACC	87.72	PASS	AB=0.952;AC=10;AF=0.185;AN=54;BaseQRankSum=-0.499;DP=559;FS=3.442;HRun=2;HaplotypeScore=163.0605;InbreedingCoeff=-0.1466;MQ=30.40;MQ0=89;MQRankSum=-2.267;QD=0.58;ReadPosRankSum=-0.567;VQSLOD=-0.6858;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:25:3.36:0,3,26	0/0:9,0:7:1.23:0,1,13	0/0:39,0:1:3.01:0,3,31	0/0:56,0:5:4.90:0,5,82	0/0:21,0:17:3.74:0,4,13	0/1:12,0:12:6.93:7,0,18	0/0:25,0:22:4.09:0,4,55	0/0:23,0:18:27.55:0,28,173	0/0:16,0:13:25.55:0,26,122	0/0:25,0:11:14.66:0,15,113	0/0:8,0:7:5.91:0,6,59	0/0:17,0:15:5.05:0,5,58	0/1:12,0:10:6.78:7,0,33	0/1:27,0:26:0.25:0,0,36	0/1:11,4:14:36.80:112,0,37	0/0:15,0:14:6.80:0,7,94	0/1:21,0:20:23.58:24,0,66	0/0:18,0:13:4.88:0,5,88	0/1:21,0:14:11.01:11,0,203	0/0:17,0:16:5.06:0,5,74	./.	1/1:15,0:11:1.93:9,2,0	0/0:6,0:3:2.88:0,3,15	0/0:24,0:17:8.19:0,8,48	0/0:16,0:14:5.86:0,6,37	0/0:18,0:13:20.88:0,21,114	0/1:15,0:14:14.47:30,0,14	0/1:8,0:6:5.17:5,0,29
chr10	9485555	.	ACACACACAC	A	1536.03	PASS	AB=0.985;AC=35;AF=0.648;AN=54;BaseQRankSum=2.373;DP=579;FS=2.195;HRun=0;HaplotypeScore=169.6654;InbreedingCoeff=-0.2042;MQ=31.14;MQ0=94;MQRankSum=-1.023;QD=3.48;ReadPosRankSum=0.214;VQSLOD=2.8943;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:31,0:26:16.02:45,0,16	1/1:10,0:7:5.98:52,6,0	0/0:47,0:3:8:0,8,75	0/0:67,0:8:18.77:0,19,287	1/1:21,0:17:2.67:30,3,0	1/1:13,0:12:14.05:107,14,0	1/1:24,0:20:22.72:173,23,0	0/1:23,0:18:4.46:4,0,188	0/1:17,0:14:61.32:61,0,220	1/1:23,0:9:5.43:29,5,0	0/1:9,0:8:4.13:4,0,52	0/1:18,0:16:5.47:32,0,5	0/1:11,0:9:18.17:25,0,18	0/1:26,0:24:15.59:32,0,16	0/1:16,0:15:1.34:1,0,11	1/1:16,0:15:0.20:98,0,0	0/1:25,0:22:72.30:91,0,72	0/1:18,0:13:9.73:10,0,191	0/1:19,3:13:99:356,0,152	0/1:14,2:16:46.23:270,0,46	./.	0/1:16,0:12:7.91:21,0,8	1/1:6,0:4:2.99:24,3,0	1/1:23,0:16:3.16:13,3,0	1/1:16,0:14:5.79:56,6,0	0/1:16,0:11:60.87:61,0,70	0/1:15,0:13:7.15:7,0,135	1/1:10,0:8:13.39:85,13,0
chr10	9485561	.	ACAC	A	2323.65	PASS	AB=0.996;AC=40;AF=0.741;AN=54;BaseQRankSum=1.058;DP=584;FS=1.556;HRun=0;HaplotypeScore=145.3087;InbreedingCoeff=0.2233;MQ=35.50;MQ0=89;MQRankSum=0.118;QD=5.37;ReadPosRankSum=2.121;VQSLOD=2.6336;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:30,1:27:9.27:74,0,9	1/1:10,0:7:6.01:62,6,0	0/0:56,0:4:12.03:0,12,161	0/0:70,0:10:24.03:0,24,354	1/1:17,5:18:2.98:30,3,0	1/1:12,1:12:14.72:141,15,0	1/1:22,2:20:23.19:246,23,0	1/1:20,0:15:15.87:104,16,0	1/1:18,0:14:3.96:258,4,0	1/1:21,0:10:17.54:201,18,0	0/1:12,0:11:3.67:4,0,54	1/1:15,0:13:15.32:140,15,0	1/1:10,0:8:14.36:94,14,0	0/1:26,0:24:4.29:37,0,4	0/1:16,0:15:1.24:1,0,11	1/1:12,4:15:14.61:260,15,0	1/1:26,0:23:19.30:203,19,0	0/1:18,0:13:30.11:30,0,141	0/1:24,0:15:99:106,0,181	0/1:17,0:16:38.07:50,0,38	./.	1/1:15,0:11:1.69:28,2,0	0/0:5,0:4:2.95:0,3,29	0/1:21,0:16:4.13:4,0,22	1/1:15,2:16:6.02:92,6,0	1/1:16,0:11:12.83:106,13,0	1/1:15,0:13:14.63:70,15,0	1/1:10,0:8:14.95:141,15,0
chr10	9485563	.	AC	A	2802.62	PASS	AB=0.798;AC=43;AF=0.796;AN=54;BaseQRankSum=0.162;DP=578;FS=0.754;HRun=2;HaplotypeScore=137.5617;InbreedingCoeff=0.2549;MQ=37.08;MQ0=91;MQRankSum=0.390;QD=6.55;ReadPosRankSum=2.910;VQSLOD=0.9343;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:26,5:26:12.55:97,13,0	1/1:7,3:7:6.01:63,6,0	0/0:57,1:6:11.82:0,12,146	0/0:70,2:11:24.13:0,24,289	1/1:15,9:20:2.98:31,3,0	1/1:9,4:12:16.99:161,17,0	1/1:12,11:19:21.84:220,22,0	1/1:16,1:12:33.57:318,34,0	1/1:8,10:14:14.01:317,14,0	1/1:14,5:8:17.54:200,18,0	0/1:6,6:11:3.51:4,0,39	1/1:12,2:12:15.02:160,15,0	1/1:7,3:8:14.85:138,15,0	1/1:16,10:24:3.96:47,4,0	0/1:7,9:15:1.24:1,0,11	1/1:13,2:14:23.24:231,23,0	1/1:20,5:23:17.47:231,17,0	0/1:14,3:12:51.39:51,0,125	0/1:21,3:15:78.53:79,0,174	0/1:16,2:16:13.62:14,0,20	./.	1/1:13,2:11:3.01:30,3,0	0/1:5,1:5:17.90:18,0,18	0/1:13,5:14:3.99:4,0,19	1/1:12,5:16:6.02:72,6,0	1/1:13,2:10:17.91:158,18,0	1/1:12,3:13:18.91:174,19,0	1/1:7,2:7:14.95:141,15,0
chr10	9485564	.	C	CA	3627.92	PASS	AB=0.924;AC=41;AF=0.759;AN=54;BaseQRankSum=0.211;DP=584;FS=5.145;HRun=1;HaplotypeScore=138.6241;InbreedingCoeff=0.3778;MQ=37.02;MQ0=90;MQRankSum=-0.229;QD=9.02;ReadPosRankSum=1.133;VQSLOD=1.3154;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,18:24:14.97:204,15,0	1/1:8,2:7:6.01:63,6,0	0/0:58,0:6:11.82:0,12,148	0/0:73,0:11:24.03:0,24,279	1/1:20,4:20:2.99:46,3,0	1/1:6,1:13:18.05:218,18,0	1/1:17,6:20:22.24:257,22,0	1/1:7,0:13:36.08:489,36,0	1/1:13,3:13:14.60:330,15,0	1/1:20,0:9:20.51:220,21,0	0/0:13,1:13:3.40:0,3,42	1/1:10,3:11:15.02:170,15,0	1/1:11,2:11:15.33:159,15,0	1/1:18,8:24:8.94:69,9,0	0/1:18,0:17:1.32:1,0,11	1/1:10,0:14:24.03:248,24,0	1/1:20,3:21:19.85:248,20,0	0/1:12,0:11:57.30:57,0,121	0/1:26,1:18:82.62:83,0,141	0/1:17,0:15:7.21:14,0,7	./.	1/1:9,6:11:3.48:31,3,0	0/1:5,1:5:17.85:18,0,18	0/0:16,1:12:2.99:0,3,25	1/1:11,0:16:6:55,6,0	1/1:14,2:11:19.49:206,19,0	1/1:7,7:12:18.06:292,18,0	1/1:9,0:7:14.98:150,15,0
chr10	9485567	.	CACACACA	C	1799.21	PASS	AB=0.886;AC=20;AF=0.357;AN=56;BaseQRankSum=2.595;DP=591;FS=1.320;HRun=0;HaplotypeScore=160.5943;InbreedingCoeff=0.1250;MQ=40.32;MQ0=84;MQRankSum=-2.762;QD=7.53;ReadPosRankSum=0.973;VQSLOD=2.7411;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:24:16.75:0,17,347	1/1:6,3:7:11.62:159,12,0	0/0:61,0:7:15.03:0,15,224	0/0:75,0:13:27.73:0,28,420	0/0:26,0:22:9.02:0,9,157	0/0:17,0:15:13.66:0,14,295	0/0:25,0:21:29.43:0,29,378	0/0:18,0:15:42.14:0,42,710	0/0:16,0:13:10.65:0,11,425	0/1:20,0:9:25.20:40,0,25	0/0:14,1:14:3:0,3,50	0/1:9,3:10:30.19:147,0,30	0/1:11,2:11:3.48:213,0,3	1/1:22,4:24:0.77:145,1,0	1/1:18,0:17:3.28:9,3,0	0/0:15,0:14:19.50:0,19,212	0/1:15,8:21:99:305,0,183	0/0:19,0:14:27.09:0,27,506	0/1:26,0:17:17.94:18,0,373	0/1:16,0:14:30.54:31,0,166	0/0:19,0:8:3.01:0,3,63	0/1:12,3:11:6.94:34,0,7	1/1:6,0:5:5.80:39,6,0	0/1:12,1:9:1.63:2,0,12	0/0:18,0:17:5.81:0,6,83	0/1:13,6:14:99:340,0,134	0/1:13,1:12:32.70:33,0,245	1/1:4,5:7:21.07:451,21,0
chr10	9485574	.	A	AC	700.60	PASS	AB=0.960;AC=21;AF=0.375;AN=56;BaseQRankSum=3.865;DP=596;FS=8.449;HRun=1;HaplotypeScore=150.2653;InbreedingCoeff=0.5724;MQ=44.08;MQ0=71;MQRankSum=-5.026;QD=3.69;ReadPosRankSum=-1.518;VQSLOD=-0.7458;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:25:25.96:0,26,265	1/1:9,0:7:11.54:95,12,0	0/0:64,0:8:17.65:0,18,156	0/0:77,0:14:28.03:0,28,246	0/0:25,0:21:8.63:0,9,103	0/0:17,0:15:29.63:0,30,285	0/0:25,0:21:25.87:0,26,306	0/0:18,0:17:44.59:0,45,442	0/0:15,0:13:26.91:0,27,273	1/1:23,0:15:11.71:36,12,0	0/0:15,0:14:1.55:0,2,32	1/1:13,0:11:1.01:71,1,0	1/1:11,2:11:2.15:64,2,0	1/1:22,1:22:14.28:126,14,0	1/1:15,0:15:6.50:18,7,0	0/0:17,0:16:29.02:0,29,223	0/1:21,0:19:31.03:91,0,31	0/0:18,0:14:24.02:0,24,269	0/0:26,0:18:37.46:0,37,342	0/0:16,0:14:7.93:0,8,87	0/0:19,0:8:9.02:0,9,100	1/1:16,0:12:6.49:72,6,0	0/0:7,0:6:2.50:0,2,9	1/1:15,0:11:8.58:24,9,0	0/0:18,0:18:14.01:0,14,145	0/1:19,1:16:15.96:117,0,16	0/1:12,0:12:12.35:12,0,41	1/1:9,0:7:19.40:160,19,0
chr10	9485579	.	AC	A	340.68	PASS	AB=0.978;AC=9;AF=0.161;AN=56;BaseQRankSum=1.580;DP=556;FS=0.711;HRun=10;HaplotypeScore=142.4830;InbreedingCoeff=0.5980;MQ=47.88;MQ0=49;MQRankSum=-1.965;QD=2.05;ReadPosRankSum=0.017;VQSLOD=0.1359;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:23:30.45:0,30,193	0/0:6,0:6:5.82:0,6,34	0/0:65,0:9:8.78:0,9,81	0/1:78,0:14:0.85:1,0,88	0/0:22,0:20:11.35:0,11,79	0/0:18,0:16:27.18:0,27,193	0/0:25,0:21:33.28:0,33,222	0/0:13,0:13:27.26:0,27,136	0/0:17,0:15:23.64:0,24,155	0/0:18,0:15:16.27:0,16,80	0/1:13,0:14:2.40:4,0,2	0/0:7,0:8:6.72:0,7,65	0/0:12,0:11:14.50:0,15,96	0/0:16,0:16:18.38:0,18,104	0/1:18,0:18:2.46:2,0,19	0/0:18,0:17:11.82:0,12,78	0/0:19,0:17:21.44:0,21,113	0/0:18,0:15:13.93:0,14,95	1/1:12,11:17:35.64:281,36,0	1/1:11,4:13:9.40:92,9,0	1/1:10,7:9:11.94:96,12,0	0/0:9,0:7:8.41:0,8,53	0/0:8,0:7:5:0,5,19	0/0:16,0:13:8.69:0,9,33	0/0:18,0:18:17.76:0,18,120	0/0:17,0:15:25.36:0,25,151	0/0:6,0:8:13.64:0,14,91	0/0:9,0:8:23.50:0,24,145
chr10	9485581	.	C	CA	1155.12	PASS	AB=0.872;AC=22;AF=0.393;AN=56;BaseQRankSum=3.217;DP=550;FS=1.174;HRun=0;HaplotypeScore=139.2507;InbreedingCoeff=0.3172;MQ=48.74;MQ0=40;MQRankSum=-5.180;QD=5.58;ReadPosRankSum=-0.092;VQSLOD=3.0692;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:25:35.98:0,36,374	1/1:5,1:6:8.92:52,9,0	0/0:66,0:10:14.73:0,15,153	0/0:75,0:14:25.04:0,25,167	0/0:23,0:21:11.54:0,12,151	0/0:18,0:16:30.96:0,31,340	0/0:26,0:22:40.14:0,40,425	0/0:14,0:14:30.65:0,31,322	0/0:16,0:14:33.53:0,34,301	1/1:8,10:16:36.04:409,36,0	0/1:3,11:14:7.96:71,0,8	0/0:6,1:7:7.69:0,8,32	0/1:12,0:11:4.24:4,0,11	0/1:15,1:17:22.20:28,0,22	1/1:1,16:17:27.01:289,27,0	0/0:18,0:17:32.04:0,32,267	0/1:16,0:16:32.87:33,0,38	0/0:16,0:14:23.88:0,24,214	0/1:24,1:19:12.91:13,0,115	0/1:12,2:13:16.59:17,0,46	0/0:18,0:10:10.92:0,11,64	1/1:7,0:7:2.83:12,3,0	1/1:3,6:8:6.02:77,6,0	1/1:4,12:13:15.04:184,15,0	0/0:18,0:18:23.82:0,24,251	0/1:13,3:15:37.04:76,0,37	0/1:8,1:9:22.98:50,0,23	1/1:9,0:8:0.34:24,0,0
chr10	9487003	.	GT	G	8337.15	PASS	AB=0.625;AC=45;AF=0.804;AN=56;BaseQRankSum=14.329;DP=468;FS=6.683;HRun=2;HaplotypeScore=164.0145;InbreedingCoeff=0.8890;MQ=70.46;MQ0=3;MQRankSum=-14.052;QD=22.84;ReadPosRankSum=2.027;VQSLOD=4.4355;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,14:18:35.51:315,36,0	1/1:0,10:9:25.99:203,26,0	0/0:15,0:15:41.97:0,42,580	0/0:13,0:13:38.96:0,39,550	1/1:1,18:19:38.99:348,39,0	1/1:3,27:30:87:776,87,0	1/1:4,13:17:44.97:414,45,0	1/1:2,21:23:63.10:627,63,0	1/1:1,15:16:42.01:377,42,0	1/1:1,16:16:45.04:426,45,0	1/1:2,16:18:50.56:420,51,0	1/1:1,10:13:32.50:276,33,0	1/1:3,14:17:41.97:361,42,0	1/1:1,12:13:35.97:307,36,0	1/1:3,20:23:60:529,60,0	1/1:2,13:15:41.99:369,42,0	0/1:4,6:10:9.08:136,0,9	1/1:0,5:5:14.50:119,15,0	0/0:16,0:16:48.16:0,48,716	0/0:38,0:38:99:0,114,1708	0/0:21,0:21:63.20:0,63,921	1/1:2,12:14:34.97:278,35,0	1/1:2,13:15:41.28:346,41,0	1/1:2,7:8:14.50:120,14,0	1/1:3,14:17:47.51:429,48,0	1/1:0,21:21:63.06:586,63,0	1/1:1,17:18:50.16:427,50,0	1/1:0,6:6:17.61:148,18,0
chr10	9487006	.	CAACTGG	C	18025.08	PASS	AB=0.571;AC=45;AF=0.804;AN=56;BaseQRankSum=14.642;DP=436;FS=5.042;HRun=0;HaplotypeScore=169.5012;InbreedingCoeff=0.9179;MQ=73.67;MQ0=3;MQRankSum=-14.693;QD=54.79;ReadPosRankSum=2.776;VQSLOD=4.8895;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,11:13:30.10:583,30,0	1/1:1,9:9:27.09:504,27,0	0/0:14,0:14:36.10:0,36,1020	0/0:15,0:15:45.15:0,45,1445	1/1:0,15:15:36.12:702,36,0	1/1:1,27:28:81.28:1603,81,0	1/1:1,13:14:39.13:774,39,0	1/1:3,18:21:57.20:1161,57,0	1/1:2,12:14:42.14:840,42,0	1/1:3,13:15:45.15:926,45,0	1/1:1,16:17:51.17:984,51,0	1/1:2,10:12:33.11:637,33,0	1/1:0,13:14:42.14:826,42,0	1/1:0,12:12:36.12:711,36,0	1/1:0,20:20:60.21:1179,60,0	1/1:0,13:13:39.13:774,39,0	0/1:2,6:8:1.79:345,0,2	1/1:0,5:5:15.05:286,15,0	0/0:16,0:16:48.16:0,48,1697	0/0:40,0:40:99:0,120,4328	0/0:22,0:22:66.23:0,66,2380	1/1:0,12:12:36.12:677,36,0	1/1:2,13:15:39.13:735,39,0	1/1:3,5:7:12.04:220,12,0	1/1:0,14:14:42.14:822,42,0	1/1:0,23:23:69.24:1384,69,0	1/1:1,17:18:54.17:999,54,0	1/1:0,6:6:18.06:350,18,0
chr10	9487340	.	CT	C	48.19	PASS	AC=6;AF=0.115;AN=52;BaseQRankSum=3.350;DP=563;FS=2.051;HRun=1;HaplotypeScore=98.7314;InbreedingCoeff=0.8125;MQ=97.93;MQ0=0;MQRankSum=-1.663;QD=6.88;ReadPosRankSum=-2.474;VQSLOD=-0.0938;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,138,2121	0/0:11,0:11:33.10:0,33,504	0/0:27,0:27:78.23:0,78,1154	0/0:31,0:31:93.28:0,93,1447	0/0:23,0:23:66.21:0,66,1031	0/0:31,0:31:93.30:0,93,1462	0/0:26,0:26:78.25:0,78,1224	0/0:27,0:27:78.27:0,78,1242	0/0:20,0:20:60.19:0,60,936	1/1:0,1:1:3.01:42,3,0	1/1:1,0:1:3.01:33,3,0	0/0:31,0:31:93.32:0,93,1485	0/0:27,0:27:81.28:0,81,1286	0/0:20,0:20:60.20:0,60,959	./.	0/0:24,0:24:72.25:0,72,1151	0/0:21,0:21:63.21:0,63,1006	0/0:18,0:18:54.18:0,54,863	0/0:21,0:21:63.21:0,63,1004	0/0:29,0:29:87.30:0,87,1391	0/0:23,0:23:69.22:0,69,1075	0/0:19,0:19:57.19:0,57,908	./.	1/1:0,5:5:6.02:84,6,0	0/0:16,0:16:48.16:0,48,767	0/0:22,0:22:66.22:0,66,1034	0/0:31,0:30:93.32:0,93,1487	0/0:12,0:12:36.12:0,36,571
chr10	9488040	.	C	CAGTGTGAG	26543.37	PASS	AC=44;AF=0.815;AN=54;BaseQRankSum=2.990;DP=463;FS=1.253;HRun=0;HaplotypeScore=214.3660;InbreedingCoeff=0.9704;MQ=75.68;MQ0=0;MQRankSum=-11.415;QD=72.13;ReadPosRankSum=3.193;VQSLOD=5.1285;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:13,5:18:21.07:881,21,0	1/1:2,5:7:17.85:655,18,0	0/0:22,0:21:34.82:0,35,739	0/0:28,0:25:40.80:0,41,840	1/1:9,19:28:53.95:2264,54,0	1/1:9,11:20:39.13:1588,39,0	1/1:12,3:15:18.06:689,18,0	1/1:25,5:32:42.09:1170,42,0	1/1:5,5:10:12.04:513,12,0	1/1:6,8:14:33.05:1287,33,0	1/1:11,13:24:43.28:1780,43,0	1/1:14,8:22:33.84:1517,34,0	1/1:6,2:8:9.99:498,10,0	1/1:7,6:13:27.08:1139,27,0	1/1:8,6:14:23.92:998,24,0	1/1:4,9:13:27.09:1154,27,0	1/1:12,7:19:30.10:1270,30,0	1/1:7,6:13:23.24:1024,23,0	0/0:10,0:10:21.06:0,21,489	0/0:12,0:12:27.09:0,27,737	0/0:22,0:22:51.14:0,51,1182	1/1:8,9:17:36.12:1525,36,0	1/1:5,11:16:36.11:1540,36,0	1/1:7,5:12:15.05:640,15,0	1/1:7,11:18:39.13:1666,39,0	1/1:8,10:18:36.11:1326,36,0	1/1:9,8:17:39.12:1422,39,0	./.
chr10	9488073	.	A	AAAAG	2771.46	PASS	AB=1.000;AC=44;AF=0.815;AN=54;BaseQRankSum=-7.824;DP=351;FS=2.745;HRun=0;HaplotypeScore=246.5718;InbreedingCoeff=0.0814;MQ=59.68;MQ0=2;MQRankSum=1.234;QD=8.22;ReadPosRankSum=4.675;VQSLOD=2.4832;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:10,0:10:0.46:67,0,0	1/1:5,0:5:8.56:62,9,0	0/0:14,0:10:5.29:0,5,35	0/1:18,0:14:0.64:1,0,29	1/1:21,0:20:22.07:113,22,0	1/1:10,0:10:14.52:79,15,0	1/1:8,0:8:13.37:66,13,0	1/1:23,0:18:13.03:62,13,0	0/1:8,0:8:10.86:22,0,11	1/1:11,0:11:14.89:110,15,0	0/1:17,0:17:0.67:82,0,1	1/1:12,0:12:8.91:95,9,0	0/1:10,0:10:15.83:16,0,19	1/1:10,0:10:2.73:57,3,0	0/1:9,0:9:0.46:49,0,0	1/1:5,0:5:11.28:62,11,0	1/1:17,0:17:13.88:129,14,0	1/1:16,0:16:31.54:181,32,0	1/1:6,5:13:23.88:255,24,0	1/1:5,17:23:42.03:818,42,0	1/1:4,8:12:6.02:146,6,0	1/1:9,0:9:10.34:109,10,0	1/1:19,0:18:1.69:54,2,0	0/1:7,0:7:3.08:25,0,3	1/1:17,0:17:12.65:64,13,0	1/1:11,0:11:2.67:59,3,0	0/1:16,0:16:2.73:110,0,3	./.
chr10	9488089	.	GA	G	1655.94	PASS	AB=0.871;AC=20;AF=0.357;AN=56;BaseQRankSum=-0.598;DP=350;FS=3.899;HRun=3;HaplotypeScore=244.2487;InbreedingCoeff=0.6510;MQ=47.88;MQ0=6;MQRankSum=-3.943;QD=11.58;ReadPosRankSum=0.378;VQSLOD=1.9184;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,3:12:15.40:116,15,0	0/0:5,0:5:10.90:0,11,72	0/1:12,1:6:9.17:9,0,124	0/1:14,1:9:19.38:19,0,140	1/1:14,7:20:34.68:332,35,0	1/1:6,5:11:19.86:200,20,0	1/1:4,4:8:20.02:150,20,0	1/1:5,8:8:14.53:153,15,0	1/1:7,2:9:17.58:129,18,0	0/0:7,0:7:7.93:0,8,78	0/0:20,0:20:19.06:0,19,184	0/0:13,0:13:10.70:0,11,123	0/0:16,0:16:23.10:0,23,164	0/0:16,0:16:32.95:0,33,168	0/0:11,0:11:28.54:0,29,197	1/1:3,3:6:10.98:120,11,0	0/0:15,0:15:15.85:0,16,169	0/1:5,8:13:8.31:294,0,8	0/0:13,0:13:33.08:0,33,410	0/0:26,0:26:62.83:0,63,653	0/0:10,0:10:8.98:0,9,85	0/1:8,0:8:2.30:9,0,2	0/0:15,0:14:6.45:0,6,86	0/0:6,0:6:7.70:0,8,54	1/1:9,5:14:40.03:326,40,0	0/0:17,0:17:44.61:0,45,361	0/0:15,0:15:9.05:0,9,167	0/0:2,0:2:6:0,6,53
chr10	9488092	.	AG	A	1955.42	PASS	AB=0.822;AC=35;AF=0.625;AN=56;BaseQRankSum=5.747;DP=337;FS=96.056;HRun=2;HaplotypeScore=235.3258;InbreedingCoeff=0.3093;MQ=43.81;MQ0=5;MQRankSum=-4.682;QD=7.44;ReadPosRankSum=1.192;VQSLOD=0.0094;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:6,5:11:5.36:70,0,5	0/1:4,0:4:4.43:9,0,4	0/0:12,0:5:9.18:0,9,126	0/0:15,0:9:10.13:0,10,162	1/1:12,7:18:20.98:186,21,0	1/1:6,5:11:31.17:178,31,0	0/1:7,1:8:6.55:29,0,7	1/1:9,0:5:14.55:94,15,0	1/1:2,7:9:21.72:174,22,0	1/1:7,0:7:7.95:64,8,0	0/1:14,4:18:34.95:58,0,35	1/1:12,1:13:4.49:116,4,0	0/1:10,4:15:5.19:115,0,5	1/1:13,2:15:12.13:92,12,0	0/1:10,2:12:17.12:26,0,17	1/1:4,2:6:15.60:81,16,0	1/1:16,1:17:1.20:96,1,0	1/1:12,0:12:16.86:106,17,0	0/0:12,0:12:35.33:0,35,358	0/0:23,0:23:55.59:0,56,604	0/0:10,0:10:11.96:0,12,111	1/1:7,2:9:11.54:106,12,0	1/1:12,3:14:5.05:124,5,0	0/1:4,2:6:0.40:22,0,0	1/1:9,5:14:31.29:249,31,0	0/1:15,2:17:13.83:14,0,35	0/1:10,5:15:2.36:122,0,2	0/0:2,0:2:4.87:0,5,17
chr10	9488095	.	AAGGAAGGAAGGAAGG	A	7320.76	PASS	AB=0.889;AC=35;AF=0.625;AN=56;BaseQRankSum=8.870;DP=340;FS=0.486;HRun=0;HaplotypeScore=299.1249;InbreedingCoeff=0.0742;MQ=41.23;MQ0=6;MQRankSum=-5.047;QD=27.42;ReadPosRankSum=1.643;VQSLOD=3.0847;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:11:10.31:273,10,0	1/1:4,0:4:9.03:154,9,0	0/0:9,0:3:6.49:0,6,285	0/0:19,0:9:14.98:0,15,566	0/1:20,0:19:19.48:210,0,19	1/1:12,0:12:14.23:316,14,0	0/1:8,0:8:9.74:39,0,10	1/1:10,0:5:0.21:18,0,0	1/1:9,0:9:15.87:463,16,0	0/1:7,0:7:12.21:188,0,12	0/1:12,4:16:13.40:514,0,13	0/1:12,1:13:23.36:462,0,23	1/1:13,4:17:26.53:866,27,0	0/1:14,2:16:11.99:511,0,12	0/1:10,2:12:21.16:334,0,21	1/1:6,0:6:6.35:120,6,0	0/1:16,1:17:37.03:256,0,37	1/1:12,0:12:10.09:202,10,0	0/0:13,0:13:38.75:0,39,1458	0/0:22,0:22:57.19:0,57,3661	0/0:10,0:10:12.04:0,12,734	0/1:6,0:8:54.24:162,0,54	0/1:10,0:12:8.14:303,0,8	0/1:4,0:6:14.94:78,0,15	1/1:15,0:15:10.01:442,10,0	1/1:15,2:17:30.64:607,31,0	1/1:12,4:16:6.54:727,7,0	1/1:2,0:2:6.02:74,6,0
chr10	9488099	.	AAGGAAGGAAGGAAGGAAGG	A	9239.32	PASS	AB=1.000;AC=35;AF=0.625;AN=56;BaseQRankSum=7.623;DP=348;FS=2.306;HRun=0;HaplotypeScore=322.8094;InbreedingCoeff=0.1569;MQ=38.51;MQ0=7;MQRankSum=-5.228;QD=34.48;ReadPosRankSum=-0.004;VQSLOD=3.3840;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:9,1:10:29.40:466,29,0	1/1:3,0:3:9.03:156,9,0	0/0:13,0:2:6.02:0,6,355	0/0:21,0:11:19.40:0,19,771	1/1:18,2:19:49.57:637,50,0	1/1:10,1:11:24.31:531,24,0	1/1:8,0:8:18.20:143,18,0	0/1:7,0:5:1.23:32,0,1	1/1:7,4:11:28.82:796,29,0	0/1:8,0:8:2.16:216,0,2	0/1:16,0:16:18.70:563,0,19	0/1:13,0:13:34.90:397,0,35	1/1:19,0:19:5.72:916,6,0	0/1:15,0:15:22.92:557,0,23	0/1:12,0:12:6.16:323,0,6	1/1:6,0:6:17.88:248,18,0	0/1:16,0:16:59.54:265,0,60	1/1:13,0:13:30.17:340,30,0	0/0:14,0:13:39.13:0,39,1957	0/0:21,0:21:57.20:0,57,4611	0/0:10,0:10:15.05:0,15,1055	0/1:8,0:8:68.48:159,0,68	0/1:13,0:12:30.38:225,0,30	1/1:7,0:7:3.89:68,4,0	1/1:10,5:15:41.26:773,41,0	0/1:18,0:18:20.59:589,0,21	0/1:17,0:17:8.97:722,0,9	1/1:2,0:2:6.02:114,6,0
chr10	9488112	.	AG	A	1538.04	PASS	AB=0.942;AC=30;AF=0.536;AN=56;BaseQRankSum=6.150;DP=343;FS=2.253;HRun=2;HaplotypeScore=223.2580;InbreedingCoeff=0.2931;MQ=43.42;MQ0=7;MQRankSum=-5.795;QD=6.87;ReadPosRankSum=2.020;VQSLOD=0.9985;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,1:10:26.92:233,27,0	0/0:3,0:3:3.15:0,3,13	0/0:27,1:9:0.25:0,0,180	0/1:32,1:14:4.43:4,0,251	1/1:11,5:15:25.79:301,26,0	1/1:8,1:9:16.06:188,16,0	0/1:2,3:5:2.06:103,0,2	1/1:5,0:5:3.86:23,4,0	1/1:10,0:10:13.98:121,14,0	0/1:8,0:8:16.65:31,0,17	0/0:17,0:17:1.65:0,2,34	0/1:12,0:12:3.73:14,0,4	0/1:21,0:21:26.86:27,0,28	0/1:14,1:15:4.74:44,0,5	0/0:12,0:12:11.87:0,12,43	1/1:2,1:3:9.01:93,9,0	0/0:12,0:12:1.97:0,2,14	1/1:3,3:6:12.01:131,12,0	0/0:13,0:12:34.93:0,35,478	0/0:23,0:23:63.21:0,63,922	0/0:9,0:9:18.06:0,18,261	1/1:8,0:8:3.18:39,3,0	1/1:12,0:13:2.86:43,3,0	1/1:7,0:7:2.81:14,3,0	1/1:6,4:10:19.80:258,20,0	0/1:18,0:18:3.90:4,0,37	0/1:15,0:15:7.83:39,0,8	0/0:2,0:2:4.59:0,5,15
chr10	9488115	.	AAGG	A	2679.29	PASS	AB=0.897;AC=38;AF=0.679;AN=56;BaseQRankSum=10.014;DP=366;FS=13.253;HRun=0;HaplotypeScore=236.0896;InbreedingCoeff=0.2765;MQ=46.52;MQ0=8;MQRankSum=-6.107;QD=10.85;ReadPosRankSum=2.861;VQSLOD=1.8988;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:8,2:10:26.06:144,0,26	1/1:3,0:3:6.27:32,6,0	0/0:35,0:13:24.77:0,25,315	0/0:39,0:17:26.91:0,27,354	0/1:14,5:18:63.87:177,0,64	0/1:6,4:10:1.97:200,0,2	0/1:4,1:5:18.87:19,0,88	1/1:7,0:7:20.98:175,21,0	1/1:8,3:11:26.75:260,27,0	1/1:9,0:9:3.19:71,3,0	1/1:18,0:18:11.33:122,11,0	1/1:11,0:11:28.73:177,29,0	1/1:21,0:21:21:228,21,0	0/1:15,0:15:9.02:119,0,9	1/1:13,0:13:6.72:108,7,0	1/1:1,2:3:2.34:59,2,0	0/1:12,0:12:6.14:79,0,6	0/1:6,0:6:16.02:16,0,32	0/0:13,0:12:36.12:0,36,612	0/0:24,0:24:69.23:0,69,1414	0/0:8,0:8:18.06:0,18,338	1/1:8,0:8:21.04:120,21,0	1/1:13,0:13:23.46:157,23,0	1/1:7,0:7:9.33:77,9,0	0/1:10,0:10:98.47:173,0,98	1/1:19,0:19:2.55:131,3,0	1/1:15,0:15:25.07:212,25,0	1/1:2,0:2:1.77:4,2,0
chr10	9488118	.	G	GA	1023.04	PASS	AB=0.935;AC=22;AF=0.393;AN=56;BaseQRankSum=2.940;DP=393;FS=0.000;HRun=2;HaplotypeScore=239.1676;InbreedingCoeff=0.1230;MQ=48.94;MQ0=8;MQRankSum=-4.514;QD=5.17;ReadPosRankSum=-0.574;VQSLOD=-0.1650;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:8,2:10:1.86:100,0,2	0/0:4,0:4:6.67:0,7,34	0/0:39,0:15:25.30:0,25,277	0/0:42,0:18:24.30:0,24,283	0/1:16,7:22:51.59:151,0,52	1/1:8,4:12:5.20:146,5,0	0/1:4,1:5:18.85:19,0,61	1/1:2,7:9:23.95:195,24,0	1/1:8,4:12:26.03:151,26,0	0/1:10,0:10:3.87:106,0,4	0/1:21,0:21:13.82:14,0,91	0/0:12,0:12:13.78:0,14,65	0/1:21,0:21:3.47:3,0,58	0/0:15,0:15:3.59:0,4,65	0/0:15,0:15:17.91:0,18,85	1/1:3,0:3:5.92:39,6,0	0/1:12,0:12:14.54:15,0,15	0/1:6,1:7:23.67:28,0,24	0/0:13,0:12:36.10:0,36,429	0/0:24,0:24:69.02:0,69,731	0/0:7,0:7:18.02:0,18,196	1/1:8,0:8:2.26:93,2,0	0/1:13,0:13:37:37,0,40	0/1:7,0:7:2.80:27,0,3	0/1:10,1:11:68.21:69,0,68	0/0:19,0:19:10.93:0,11,108	0/1:14,0:14:1.25:1,0,24	0/0:2,0:2:5.75:0,6,30
chr10	9488124	.	AG	A	5746.40	PASS	AB=0.714;AC=45;AF=0.804;AN=56;BaseQRankSum=9.149;DP=387;FS=11.737;HRun=2;HaplotypeScore=200.4599;InbreedingCoeff=0.8299;MQ=54.49;MQ0=9;MQRankSum=-8.949;QD=23.45;ReadPosRankSum=3.268;VQSLOD=2.8782;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,7:9:20.99:190,21,0	0/1:3,2:5:3.63:78,0,4	0/0:46,0:17:31.31:0,31,420	0/0:49,0:22:8.48:0,8,386	1/1:0,18:17:46.81:415,47,0	1/1:0,12:12:35.29:325,35,0	1/1:0,2:2:5.42:23,5,0	1/1:0,10:10:29.84:253,30,0	1/1:1,12:13:35.15:273,35,0	1/1:0,7:9:25.66:253,26,0	1/1:4,18:22:49.31:489,49,0	1/1:8,4:12:12.69:163,13,0	1/1:4,16:20:53.97:545,54,0	1/1:2,13:15:29.41:332,29,0	1/1:3,11:14:28.53:330,29,0	1/1:0,3:3:8.99:84,9,0	1/1:1,9:10:16.77:174,17,0	1/1:0,5:6:11.99:119,12,0	0/0:14,0:13:39.12:0,39,561	0/0:25,0:25:69.23:0,69,1027	0/0:7,0:7:18.06:0,18,270	1/1:0,4:4:12.02:131,12,0	1/1:1,10:11:28.47:355,28,0	1/1:1,5:6:15:158,15,0	1/1:0,7:7:20.67:167,21,0	1/1:4,15:19:48.72:499,49,0	1/1:4,10:15:34.44:300,34,0	1/1:0,3:3:8.99:89,9,0
chr10	9488125	.	GGAGAGA	G	2880.93	PASS	AB=1.000;AC=31;AF=0.554;AN=56;BaseQRankSum=13.644;DP=393;FS=2.130;HRun=0;HaplotypeScore=238.4974;InbreedingCoeff=0.1748;MQ=54.23;MQ0=9;MQRankSum=-5.366;QD=12.26;ReadPosRankSum=9.337;VQSLOD=1.4542;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:8,0:9:23.79:63,0,24	1/1:4,1:5:8.46:120,8,0	0/0:47,0:17:20.54:0,21,889	0/0:48,0:22:35.61:0,36,950	0/1:19,0:18:12.78:13,0,93	0/1:12,0:12:48.93:62,0,49	0/0:3,0:3:8.86:0,9,60	0/0:12,0:12:28.72:0,29,162	0/1:13,0:13:43.75:139,0,44	0/1:10,0:10:35.78:83,0,36	0/1:22,0:22:23.11:271,0,23	1/1:11,1:12:15.52:326,16,0	1/1:19,0:19:30.71:375,31,0	1/1:14,1:15:27.68:247,28,0	1/1:13,0:13:12.37:166,12,0	1/1:3,0:3:6.76:38,7,0	0/1:10,0:10:16.09:61,0,16	0/1:7,0:7:32.59:33,0,45	0/0:14,0:13:39.13:0,39,1263	0/0:25,0:25:72.25:0,72,2347	0/0:7,0:7:18.06:0,18,592	1/1:4,0:4:11.51:75,12,0	1/1:11,1:12:23.07:223,23,0	0/1:5,0:5:5.60:27,0,6	0/1:8,0:8:12.26:138,0,12	0/1:20,0:20:20.51:234,0,21	1/1:14,0:14:15.22:329,15,0	1/1:3,0:3:6.46:50,6,0
chr10	9488127	.	AG	A	6435.17	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=11.335;DP=390;FS=3.973;HRun=2;HaplotypeScore=189.8941;InbreedingCoeff=0.9256;MQ=54.47;MQ0=9;MQRankSum=-9.835;QD=26.48;ReadPosRankSum=2.830;VQSLOD=4.5756;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:9,1:10:23.99:225,24,0	1/1:4,1:5:14.89:132,15,0	0/0:48,1:18:42.47:0,42,592	0/0:47,2:22:29.85:0,30,485	1/1:19,0:18:49.84:460,50,0	1/1:12,0:12:35.30:336,35,0	1/1:3,0:3:6.31:25,6,0	1/1:13,0:13:29.84:253,30,0	1/1:13,0:13:35.22:295,35,0	1/1:8,2:10:25.99:259,26,0	1/1:18,2:21:53.90:559,54,0	1/1:5,3:9:26.75:264,27,0	1/1:16,2:18:54.12:609,54,0	1/1:15,0:15:32.49:356,32,0	1/1:12,0:13:35.97:387,36,0	1/1:3,0:3:9:87,9,0	1/1:9,0:9:17.98:178,18,0	1/1:7,0:7:12.47:122,12,0	0/0:16,0:15:45.14:0,45,688	0/0:25,0:25:72.24:0,72,1139	0/0:7,0:7:18.06:0,18,288	1/1:4,0:4:12.02:132,12,0	1/1:12,0:12:35.98:400,36,0	1/1:5,0:5:15.02:162,15,0	1/1:8,0:8:20.27:170,20,0	1/1:16,0:17:47.55:522,48,0	1/1:10,2:14:39.04:407,39,0	1/1:3,0:3:9.01:96,9,0
chr10	9488454	.	G	GA	2543.81	PASS	AB=1.000;AC=25;AF=0.446;AN=56;BaseQRankSum=-2.312;DP=516;FS=3.806;HRun=11;HaplotypeScore=83.1668;InbreedingCoeff=0.9079;MQ=58.70;MQ0=6;MQRankSum=-0.675;QD=12.23;ReadPosRankSum=-0.109;VQSLOD=3.5940;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,1:36:50.48:0,50,555	1/1:2,7:8:18.04:183,18,0	0/0:22,0:14:22.40:0,22,194	0/1:16,0:7:0.10:0,0,42	0/0:25,0:25:56.12:0,56,425	0/0:13,0:13:29.87:0,30,232	0/0:18,0:18:23.81:0,24,180	0/0:25,0:24:44.76:0,45,348	0/0:11,0:11:23.63:0,24,171	0/0:4,0:21:30.41:0,30,88	0/0:2,0:18:31.27:0,31,105	1/1:0,12:12:21.04:213,21,0	1/1:1,11:12:17.11:206,17,0	1/1:7,7:14:0.81:189,1,0	0/0:4,0:20:27.13:0,27,87	0/0:9,0:9:17.91:0,18,139	1/1:5,23:28:19.44:541,19,0	0/0:31,1:34:42.35:0,42,492	1/1:14,0:26:32.37:152,32,0	1/1:3,0:19:19.01:94,19,0	1/1:6,0:8:9.56:54,10,0	1/1:0,8:8:24.05:242,24,0	0/0:3,0:13:18.33:0,18,53	0/0:7,0:14:16.28:0,16,47	0/0:25,0:27:63.65:0,64,476	1/1:6,15:20:40.50:423,41,0	1/1:11,18:28:15.18:312,15,0	1/1:0,5:5:15.03:152,15,0
chr10	9488558	.	TA	T	1526.12	PASS	AB=0.875;AC=11;AF=0.196;AN=56;BaseQRankSum=9.711;DP=520;FS=5.034;HRun=10;HaplotypeScore=53.8506;InbreedingCoeff=0.8329;MQ=67.74;MQ0=0;MQRankSum=1.151;QD=14.40;ReadPosRankSum=1.543;VQSLOD=3.7238;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:84.20:0,84,912	0/0:5,0:5:15.04:0,15,166	0/0:7,1:7:0.23:0,0,43	0/0:7,1:8:12.50:0,12,125	0/0:14,0:14:30.08:0,30,332	0/0:14,0:14:42.04:0,42,439	0/1:6,1:7:5.33:5,0,154	0/0:23,0:23:51.13:0,51,556	0/0:15,1:16:13.01:0,13,351	1/1:6,11:17:35.97:310,36,0	1/1:7,21:28:36.28:448,36,0	0/0:16,1:17:10:0,10,326	0/0:16,0:16:36.08:0,36,388	0/0:22,0:22:60.16:0,60,662	1/1:0,19:19:44.99:391,45,0	0/0:18,1:19:22.08:0,22,471	0/0:41,1:42:76.15:0,76,1036	0/0:24,5:29:17.32:0,17,630	0/0:27,2:29:26.08:0,26,728	0/0:24,0:24:57.10:0,57,601	0/0:8,0:8:21.05:0,21,224	0/0:10,0:10:30.04:0,30,316	1/1:6,13:19:32.98:286,33,0	1/1:4,12:16:29.99:260,30,0	0/0:23,0:23:60.16:0,60,657	0/0:21,0:21:54.09:0,54,583	0/0:26,2:28:23.04:0,23,689	0/0:10,0:10:24.06:0,24,265
chr10	9488810	.	TG	T	20325.93	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=15.144;DP=687;FS=0.760;HRun=2;HaplotypeScore=194.6705;InbreedingCoeff=0.9960;MQ=86.76;MQ0=0;MQRankSum=-8.284;QD=36.30;ReadPosRankSum=4.719;VQSLOD=4.1377;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,43:43:99:1519,117,0	1/1:0,11:11:30.10:389,30,0	0/0:26,0:26:68.90:0,69,971	0/0:22,0:22:66.21:0,66,922	1/1:0,16:16:30.10:389,30,0	1/1:0,16:16:48.16:623,48,0	1/1:0,24:24:72.23:935,72,0	1/1:0,31:31:93.29:1193,93,0	1/1:0,34:34:96.31:1246,96,0	1/1:1,17:18:48.16:623,48,0	1/1:1,17:18:45.15:584,45,0	1/1:1,29:30:87.28:1130,87,0	1/1:0,28:28:84.27:1090,84,0	1/1:0,23:23:66.21:857,66,0	1/1:3,29:32:84.27:1090,84,0	1/1:2,18:20:51.17:662,51,0	1/1:1,43:44:99:1667,129,0	1/1:0,20:20:60.19:776,60,0	0/0:22,0:22:60.20:0,60,898	0/0:19,0:19:54.18:0,54,805	0/0:38,0:38:99:0,114,1667	1/1:0,20:20:54.18:701,54,0	1/1:0,13:13:36.12:467,36,0	1/1:0,29:29:81.26:1051,81,0	1/1:1,25:26:72.23:935,72,0	1/1:0,29:29:81.24:1036,81,0	1/1:0,30:30:90.29:1168,90,0	1/1:0,5:5:15.05:195,15,0
chr10	9489060	.	AAC	A	2194.85	PASS	AB=0.740;AC=16;AF=0.308;AN=52;BaseQRankSum=-6.668;DP=762;FS=0.000;HRun=0;HaplotypeScore=122.6055;InbreedingCoeff=0.6978;MQ=56.02;MQ0=23;MQRankSum=2.991;QD=10.02;ReadPosRankSum=3.970;VQSLOD=3.2393;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:48:18.43:0,18,115	1/1:3,5:8:9.03:102,9,0	./.	0/0:66,0:28:5.99:0,6,62	./.	0/0:19,0:21:5.62:0,6,48	0/0:15,0:34:6.01:0,6,62	0/0:19,0:19:18.83:0,19,103	0/0:21,0:26:32.41:0,32,230	0/0:8,0:23:37.13:0,37,259	0/0:7,0:16:11.44:0,11,88	1/1:5,17:25:26.47:246,26,0	1/1:22,10:35:54.63:486,55,0	1/1:18,16:35:29.91:318,30,0	0/0:12,0:30:26.65:0,27,266	0/0:15,0:15:7.68:0,8,50	1/1:10,26:39:41.16:487,41,0	0/0:9,0:12:18.03:0,18,197	0/0:24,0:22:17.44:0,17,153	0/0:10,0:13:8.51:0,9,80	0/0:38,0:44:11.33:0,11,81	1/1:7,16:22:20.89:238,21,0	0/0:5,0:9:6.01:0,6,72	0/0:13,0:32:44.99:0,45,417	0/0:8,0:20:11.55:0,12,113	0/1:14,11:24:15.89:251,0,16	1/1:9,9:18:14.63:167,15,0	0/1:8,2:11:29.12:86,0,29
chr10	9489283	.	AT	A	8232.05	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=8.782;DP=617;FS=14.681;HRun=9;HaplotypeScore=88.9741;InbreedingCoeff=0.9898;MQ=76.20;MQ0=1;MQRankSum=-2.819;QD=15.95;ReadPosRankSum=6.060;VQSLOD=3.6866;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,24:30:66.03:604,66,0	1/1:1,0:12:18.33:54,18,0	0/0:14,0:14:12.59:0,13,346	0/0:14,0:14:24.07:0,24,271	1/1:2,21:23:63.03:577,63,0	1/1:0,26:26:69.04:632,69,0	1/1:5,15:20:33.01:302,33,0	1/1:7,25:32:75.03:686,75,0	1/1:1,18:19:42.02:384,42,0	1/1:4,23:27:69.03:631,69,0	1/1:0,18:18:48.02:439,48,0	1/1:2,0:26:46.85:138,47,0	1/1:0,0:26:48.89:143,49,0	1/1:1,0:30:50.93:150,51,0	1/1:3,29:32:78.04:714,78,0	1/1:1,17:18:53.93:482,54,0	1/1:1,0:17:28.52:84,29,0	1/1:0,15:15:42.02:383,42,0	0/0:32,0:33:87:0,87,947	0/0:20,0:20:60.18:0,60,692	0/0:20,0:19:51.14:0,51,579	1/1:2,0:23:38.70:113,39,0	1/1:2,13:15:29.65:274,30,0	1/1:2,14:16:39.02:357,39,0	1/1:4,29:33:84.04:769,84,0	1/1:1,1:22:43.74:147,44,0	1/1:1,0:23:36.67:108,37,0	1/1:1,0:12:20.37:60,20,0
chr10	9489558	.	CGTGTGTGTGTGTGTGTGTGT	C	349.58	PASS	AC=6;AF=0.130;AN=46;BaseQRankSum=2.983;DP=500;FS=19.847;HRun=0;HaplotypeScore=235.0612;InbreedingCoeff=0.6067;MQ=54.34;MQ0=18;MQRankSum=-1.459;QD=5.73;ReadPosRankSum=-1.042;VQSLOD=1.2295;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:31:27.09:0,27,1253	0/0:5,0:5:8.99:0,9,176	./.	./.	0/0:14,0:17:9.03:0,9,302	0/0:17,0:16:18.06:0,18,979	0/0:19,0:19:15.05:0,15,691	0/0:19,0:17:22.63:0,23,887	0/0:23,0:22:18.06:0,18,811	1/1:15,2:18:8.76:376,9,0	./.	0/0:12,0:11:6.02:0,6,100	0/0:13,0:12:6.49:0,6,316	0/0:11,0:11:12:0,12,455	1/1:15,7:21:3.01:71,3,0	0/0:13,0:19:9.92:0,10,500	0/0:18,0:19:23.51:0,24,841	0/0:19,0:19:36.17:0,36,1594	0/0:13,0:11:6.02:0,6,93	0/0:19,0:19:33.11:0,33,1174	0/0:38,0:35:36.04:0,36,960	0/0:16,0:15:12.04:0,12,808	./.	1/1:21,0:19:0.47:1,0,0	0/0:17,0:17:18.06:0,18,824	0/0:26,0:24:12.03:0,12,382	0/0:12,0:12:12.04:0,12,736	./.
chr10	9489755	.	CCCAGACTGG	C	32834.69	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=13.944;DP=587;FS=0.000;HRun=0;HaplotypeScore=221.3061;InbreedingCoeff=0.9890;MQ=67.63;MQ0=1;MQRankSum=-14.802;QD=70.46;ReadPosRankSum=4.594;VQSLOD=4.0997;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,18:25:42.14:1266,42,0	1/1:3,16:19:39.13:1208,39,0	0/0:34,0:31:80.49:0,80,3463	0/0:19,0:18:51.17:0,51,2065	1/1:2,27:29:60.16:1665,60,0	1/1:3,21:23:57.20:1768,57,0	1/1:1,14:15:39.13:1170,39,0	1/1:7,22:29:63.12:1535,63,0	1/1:2,15:17:39.13:1197,39,0	1/1:1,23:24:66.21:1942,66,0	1/1:0,16:16:39.13:1142,39,0	1/1:2,17:18:42.14:1262,42,0	1/1:0,23:23:57.20:1755,57,0	1/1:0,18:18:42.14:1302,42,0	1/1:2,23:25:69.24:2044,69,0	1/1:1,14:15:36.12:1064,36,0	1/1:2,15:17:42.14:1265,42,0	1/1:0,7:7:18.06:558,18,0	0/0:17,0:17:51.18:0,51,2341	0/0:27,0:27:81.26:0,81,3729	0/0:24,0:24:66.23:0,66,2942	1/1:2,21:23:54.19:1541,54,0	1/1:2,26:28:78.27:2277,78,0	1/1:5,7:12:12.04:359,12,0	1/1:2,24:26:69.24:2043,69,0	1/1:2,25:27:72.23:2155,72,0	1/1:1,20:21:57.20:1756,57,0	1/1:0,7:7:18.06:558,18,0
chr10	9491230	.	G	GT	5470.60	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-10.388;DP=611;FS=0.000;HRun=1;HaplotypeScore=65.8940;InbreedingCoeff=0.9974;MQ=88.45;MQ0=0;MQRankSum=-1.715;QD=42.08;ReadPosRankSum=1.472;VQSLOD=5.1649;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:90.29:0,90,1167	0/0:8,0:8:24.08:0,24,312	0/0:25,0:25:69.19:0,69,870	0/0:22,0:22:60.19:0,60,774	0/0:21,0:21:63.19:0,63,802	0/0:16,0:16:48.14:0,48,608	0/0:22,0:22:60.20:0,60,778	0/0:24,0:23:66.21:0,66,844	0/0:12,0:12:30.10:0,30,389	1/1:1,30:31:90.30:1349,90,0	1/1:0,27:27:75.25:1124,75,0	0/0:19,0:19:54.18:0,54,701	0/0:13,0:13:33.11:0,33,427	0/0:27,0:27:66.21:0,66,856	1/1:0,26:26:78.13:1115,78,0	0/0:14,0:14:39.13:0,39,505	0/0:20,0:20:60.20:0,60,778	0/0:20,0:20:60.19:0,60,774	0/0:25,0:25:69.19:0,69,866	0/0:33,0:33:96.31:0,96,1245	0/0:24,0:24:66.21:0,66,857	0/0:25,0:25:69.18:0,69,876	1/1:0,19:19:51.13:739,51,0	1/1:0,27:27:78.23:1144,78,0	0/0:19,0:19:51.14:0,51,646	0/0:27,0:27:78.25:0,78,1011	0/0:25,0:25:66.21:0,66,852	0/0:8,0:8:18.02:0,18,203
chr10	9491313	.	C	CT	2240.19	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=2.260;DP=402;FS=4.379;HRun=0;HaplotypeScore=60.4077;InbreedingCoeff=0.7298;MQ=74.99;MQ0=45;MQRankSum=-7.257;QD=9.03;ReadPosRankSum=-6.766;VQSLOD=1.3218;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,1:6:11.93:103,12,0	1/1:3,0:3:8.87:57,9,0	0/0:48,0:32:75.45:0,75,1006	0/0:55,0:24:57.14:0,57,739	1/1:10,0:9:14.92:157,15,0	1/1:7,0:7:8.74:81,9,0	1/1:12,0:9:15.22:84,15,0	1/1:17,0:15:24.93:248,25,0	1/1:8,0:8:10.95:69,11,0	1/1:10,0:8:19.58:172,20,0	1/1:7,1:7:8.93:90,9,0	1/1:13,0:12:14.94:138,15,0	1/1:5,9:12:5.98:47,6,0	1/1:2,11:12:3.01:39,3,0	1/1:12,0:11:17.78:120,18,0	1/1:12,0:11:13.77:99,14,0	1/1:15,1:15:29.46:215,29,0	1/1:10,0:7:13.20:109,13,0	0/0:17,0:16:48.16:0,48,665	0/0:18,0:17:39.03:0,39,519	0/0:16,0:14:30.09:0,30,409	1/1:3,4:7:2.99:24,3,0	1/1:4,0:4:3:26,3,0	1/1:23,0:19:10.93:111,11,0	1/1:0,8:8:2.94:18,3,0	1/1:11,0:9:20.85:162,21,0	1/1:0,7:7:3.01:44,3,0	1/1:14,0:7:20.95:204,21,0
chr10	9491596	.	TC	T	20240.48	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=14.694;DP=625;FS=8.321;HRun=1;HaplotypeScore=151.7114;InbreedingCoeff=0.9989;MQ=82.49;MQ0=0;MQRankSum=-6.842;QD=39.77;ReadPosRankSum=4.445;VQSLOD=3.4107;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,31:31:90.30:1258,90,0	1/1:0,7:7:21.07:294,21,0	0/0:23,0:23:69.22:0,69,1079	0/0:20,0:20:59.01:0,59,888	1/1:0,17:17:51.13:691,51,0	1/1:0,22:22:66.22:922,66,0	1/1:0,20:20:54.18:754,54,0	1/1:0,24:24:72.24:1003,72,0	1/1:0,25:25:69.23:965,69,0	1/1:0,28:28:84.28:1175,84,0	1/1:0,29:29:81.27:1132,81,0	1/1:0,19:19:51.17:713,51,0	1/1:0,19:19:57.19:796,57,0	1/1:0,33:33:87.29:1213,87,0	1/1:0,25:25:69.23:964,69,0	1/1:0,25:25:75.25:1049,75,0	1/1:0,23:23:66.22:922,66,0	1/1:0,22:22:66.22:923,66,0	0/0:18,0:18:54.17:0,54,820	0/0:25,0:25:75.26:0,75,1196	0/0:30,0:30:90.31:0,90,1436	1/1:0,15:15:42.14:587,42,0	1/1:0,21:21:60.20:838,60,0	1/1:0,27:27:72.20:985,72,0	1/1:0,16:16:48.16:671,48,0	1/1:0,25:25:75.25:1049,75,0	1/1:0,26:26:66.22:921,66,0	1/1:0,10:10:30.10:419,30,0
chr10	9491784	.	C	CAAA	6174.40	PASS	AB=0.722;AC=35;AF=0.625;AN=56;BaseQRankSum=0.101;DP=556;FS=0.000;HRun=12;HaplotypeScore=117.1597;InbreedingCoeff=0.8044;MQ=57.70;MQ0=19;MQRankSum=-4.397;QD=16.96;ReadPosRankSum=-2.605;VQSLOD=2.8457;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,5:41:76.77:685,77,0	1/1:4,5:10:15.05:258,15,0	0/0:17,0:10:13.63:0,14,140	0/1:14,0:7:6.64:7,0,34	1/1:7,1:22:14.09:342,14,0	0/1:9,1:21:2.97:193,0,3	1/1:7,1:22:11.20:332,11,0	1/1:10,0:23:29.44:332,29,0	1/1:5,1:17:26.71:220,27,0	0/0:23,0:25:29.52:0,30,500	0/0:14,0:14:31.54:0,32,367	1/1:8,5:14:21.07:326,21,0	1/1:8,8:19:27.05:390,27,0	1/1:10,1:12:17.83:202,18,0	0/0:19,0:20:48.02:0,48,522	0/1:6,0:17:5.51:156,0,6	1/1:13,13:26:37.35:621,37,0	1/1:4,0:10:19.20:160,19,0	0/0:7,0:21:46.89:0,47,293	0/0:6,0:21:44.12:0,44,270	0/0:5,0:20:43.99:0,44,264	1/1:7,6:13:19.21:262,19,0	0/0:20,0:17:32.89:0,33,353	0/0:23,0:22:56.98:0,57,608	1/1:2,1:16:26.43:224,26,0	1/1:7,13:21:20.51:758,21,0	1/1:7,11:23:33.06:500,33,0	1/1:7,2:8:13.29:209,13,0
chr10	9492834	.	A	ATTT	4088.31	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=14.187;DP=377;FS=73.372;HRun=0;HaplotypeScore=125.5966;InbreedingCoeff=0.9214;MQ=76.34;MQ0=0;MQRankSum=-12.899;QD=42.15;ReadPosRankSum=2.581;VQSLOD=1.0957;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,11:12:30.10:463,30,0	0/0:9,0:9:27.09:0,27,504	0/0:25,0:24:60.13:0,60,1009	0/0:20,0:18:33.04:0,33,545	1/1:1,10:11:30.08:417,30,0	1/1:1,5:6:18.05:237,18,0	1/1:0,6:6:18.06:270,18,0	1/1:3,1:4:12.03:183,12,0	1/1:1,5:6:18.04:255,18,0	1/1:0,5:5:15.05:246,15,0	1/1:0,5:5:15.05:218,15,0	0/0:22,0:22:66.23:0,66,1229	0/0:19,0:19:57.18:0,57,1024	0/0:19,0:19:57.20:0,57,1063	1/1:0,13:13:39.13:611,39,0	1/1:0,4:4:12.04:188,12,0	0/0:30,0:29:90.31:0,90,1671	1/1:1,1:2:6.02:89,6,0	0/0:17,0:17:51.17:0,51,946	0/0:20,0:20:60.19:0,60,1081	0/0:32,0:32:96.33:0,96,1788	0/0:19,0:19:54.19:0,54,1005	1/1:0,13:13:36.12:527,36,0	1/1:0,2:2:3:28,3,0	1/1:0,8:8:24.08:357,24,0	0/0:26,0:26:78.27:0,78,1445	0/0:21,0:21:63.21:0,63,1146	0/0:1,0:1:3.01:0,3,56
chr10	9492844	.	AATT	A	3654.72	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=13.949;DP=364;FS=70.802;HRun=0;HaplotypeScore=123.2677;InbreedingCoeff=0.8899;MQ=77.29;MQ0=0;MQRankSum=-13.856;QD=39.73;ReadPosRankSum=4.446;VQSLOD=1.6063;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,11:11:30.10:439,30,0	0/0:8,0:8:24.08:0,24,592	0/0:20,0:20:53.70:0,54,1256	0/0:15,0:15:35.96:0,36,678	1/1:0,10:10:27.09:396,27,0	1/1:0,5:5:15.05:196,15,0	1/1:0,6:6:18.06:256,18,0	1/1:3,1:4:3.01:44,3,0	1/1:0,5:5:15.05:218,15,0	1/1:0,5:5:15.05:210,15,0	1/1:0,5:5:15.05:213,15,0	0/0:21,0:21:63.22:0,63,1481	0/0:19,0:19:57.20:0,57,1396	0/0:20,0:20:60.20:0,60,1408	1/1:0,13:13:39.13:581,39,0	1/1:0,4:4:12.04:178,12,0	0/0:28,0:27:84.29:0,84,2069	1/1:0,1:1:3.01:42,3,0	0/0:15,0:15:45.15:0,45,1084	0/0:22,0:22:66.22:0,66,1545	0/0:31,0:31:93.32:0,93,2129	0/0:25,0:25:75.26:0,75,1737	1/1:0,13:13:37:508,37,0	1/1:0,2:2:3:27,3,0	1/1:0,8:8:24.08:345,24,0	0/0:26,0:26:78.27:0,78,1923	0/0:21,0:21:63.22:0,63,1501	0/0:1,0:1:3.01:0,3,74
chr10	9492873	.	GGCA	G	180.55	PASS	AB=0.755;AC=3;AF=0.054;AN=56;BaseQRankSum=6.216;DP=475;FS=38.596;HRun=0;HaplotypeScore=187.6956;InbreedingCoeff=-0.0706;MQ=73.45;MQ0=0;MQRankSum=-5.691;QD=4.40;ReadPosRankSum=-1.838;VQSLOD=1.0627;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:23:44.63:0,45,1300	0/0:7,0:7:21.07:0,21,517	0/0:15,0:15:40.67:0,41,888	0/0:23,1:23:35.35:0,35,922	0/0:12,0:12:27.09:0,27,548	0/0:13,1:14:9.21:0,9,802	0/1:14,1:17:53.75:54,0,532	0/0:11,0:11:33.07:0,33,746	0/0:11,1:13:9.23:0,9,706	0/0:7,0:7:18.06:0,18,428	0/0:13,1:14:33.10:0,33,762	0/0:20,0:20:60.21:0,60,1444	0/0:22,0:22:66.23:0,66,1594	0/0:19,0:19:57.20:0,57,1403	0/1:12,4:16:99:204,0,526	0/0:8,2:10:22.88:0,23,502	0/0:29,0:28:87.30:0,87,2098	0/0:3,0:3:2.74:0,3,35	0/0:15,0:15:45.15:0,45,1106	0/0:23,0:23:66.23:0,66,1594	0/0:29,0:29:87.30:0,87,2136	0/0:35,0:35:99:0,105,2559	0/0:16,1:17:42.73:0,43,963	0/1:3,5:8:21.81:22,0,68	0/0:16,0:15:39.13:0,39,891	0/0:31,0:31:92.53:0,93,2198	0/0:21,0:21:60.17:0,60,1454	0/0:3,0:3:9.03:0,9,222
chr10	9492894	.	GCC	G	1789.86	PASS	AB=0.725;AC=16;AF=0.286;AN=56;BaseQRankSum=10.354;DP=481;FS=101.412;HRun=2;HaplotypeScore=166.2658;InbreedingCoeff=-0.0591;MQ=66.88;MQ0=0;MQRankSum=-9.896;QD=8.65;ReadPosRankSum=-3.565;VQSLOD=-0.7115;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:17,6:21:99:126,0,564	0/0:7,0:7:21.07:0,21,406	0/0:11,0:12:30.99:0,31,599	0/0:28,1:27:20.93:0,21,882	0/1:6,7:13:0:1,0,0	0/1:13,4:17:99:110,0,446	0/1:9,10:19:99:254,0,198	0/1:10,3:11:42.28:42,0,460	0/1:13,7:20:99:237,0,447	0/1:3,7:8:99:219,0,100	0/1:11,6:17:57.66:58,0,231	0/0:18,0:18:51.14:0,51,963	0/0:21,0:21:63.20:0,63,1229	0/0:21,0:21:63.22:0,63,1264	0/1:7,8:15:99:325,0,161	0/1:8,10:18:99:313,0,392	0/0:25,0:24:75.26:0,75,1523	1/1:0,3:3:9.03:128,9,0	0/0:10,0:10:30.10:0,30,610	0/0:21,0:21:63.22:0,63,1280	0/0:24,0:24:72.25:0,72,1440	0/0:33,0:33:99:0,99,1991	0/1:11,5:16:67.39:67,0,312	1/1:1,5:6:2.36:8,2,0	0/1:14,3:17:59.47:59,0,596	0/0:27,0:27:74.47:0,74,1467	0/0:21,0:21:63.22:0,63,1279	0/0:4,0:4:12.04:0,12,225
chr10	9492950	.	AG	A	4213.53	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=11.413;DP=521;FS=29.810;HRun=5;HaplotypeScore=107.9566;InbreedingCoeff=0.9977;MQ=85.63;MQ0=1;MQRankSum=-8.082;QD=28.28;ReadPosRankSum=0.695;VQSLOD=2.7772;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,21:21:63.01:667,63,0	0/0:10,0:10:24.07:0,24,313	0/0:26,0:25:68.01:0,68,888	0/0:35,1:33:74.97:0,75,1120	1/1:1,18:19:47.86:468,48,0	1/1:2,11:13:30.09:340,30,0	1/1:1,14:15:32.89:325,33,0	1/1:1,21:22:63.18:714,63,0	1/1:0,15:15:42.12:475,42,0	0/0:14,0:14:36.08:0,36,470	0/0:10,0:10:30.09:0,30,391	0/0:20,0:20:57.10:0,57,725	0/0:21,0:21:63.21:0,63,861	0/0:17,0:17:48.15:0,48,640	0/0:23,0:23:63.07:0,63,781	1/1:3,16:19:48.14:544,48,0	0/0:24,0:24:72.20:0,72,946	1/1:0,8:8:18.05:204,18,0	0/0:11,0:11:33.07:0,33,380	0/0:17,0:17:48.16:0,48,655	0/0:40,0:40:99:0,117,1517	0/0:19,0:19:51.14:0,51,665	0/0:13,0:13:30.09:0,30,400	0/0:21,0:21:54.15:0,54,705	1/1:0,16:16:42.10:476,42,0	0/0:17,0:17:45.15:0,45,615	0/0:24,0:24:66.19:0,66,868	0/0:9,0:9:24.08:0,24,328
chr10	9494351	.	TGTAGTGG	T	7451.85	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=14.485;DP=671;FS=2.985;HRun=0;HaplotypeScore=154.9537;InbreedingCoeff=0.9980;MQ=88.26;MQ0=0;MQRankSum=-14.680;QD=70.30;ReadPosRankSum=3.230;VQSLOD=5.2036;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:72.25:0,72,2916	0/0:10,0:10:30.10:0,30,1157	0/0:29,0:29:81.27:0,81,2745	0/0:23,0:23:63.08:0,63,2214	0/0:32,0:32:93.32:0,93,3651	0/0:34,0:34:99:0,102,4027	0/0:18,0:18:54.17:0,54,2034	0/0:44,0:44:99:0,129,5133	0/0:16,0:16:48.16:0,48,1919	1/1:1,26:27:78.25:2036,78,0	1/1:0,20:20:54.66:1428,55,0	0/0:23,0:23:66.23:0,66,2538	0/0:15,0:15:45.15:0,45,1832	0/0:25,0:25:75.26:0,75,2998	1/1:1,19:20:51.18:1374,51,0	0/0:18,0:18:51.18:0,51,2061	0/0:27,0:27:78.25:0,78,3059	0/0:12,0:12:36.08:0,36,1275	0/0:35,0:35:99:0,105,3845	0/0:27,0:27:81.28:0,81,3244	0/0:27,0:27:78.25:0,78,3036	0/0:20,0:20:60.21:0,60,2381	1/1:1,27:28:81.28:2154,81,0	1/1:2,9:11:18.06:460,18,0	0/0:25,0:25:75.26:0,75,3035	0/0:29,0:29:87.30:0,87,3474	0/0:31,0:31:84.25:0,84,3206	0/0:21,0:21:63.22:0,63,2573
chr10	9494846	.	CT	C	2385.72	PASS	AB=0.833;AC=19;AF=0.339;AN=56;BaseQRankSum=-3.355;DP=550;FS=5.827;HRun=13;HaplotypeScore=73.9809;InbreedingCoeff=0.7493;MQ=73.68;MQ0=0;MQRankSum=0.415;QD=11.31;ReadPosRankSum=4.239;VQSLOD=3.5190;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,6:11:17.71:131,18,0	0/0:1,0:12:22.73:0,23,114	0/1:12,0:12:15.03:15,0,33	0/1:9,0:9:0.27:1,0,0	1/1:7,24:31:59.55:434,60,0	1/1:3,19:22:53.68:394,54,0	1/1:2,12:15:5.85:196,6,0	1/1:12,21:33:7.11:368,7,0	1/1:5,14:20:31.83:225,32,0	0/0:21,1:22:22.91:0,23,356	0/0:22,1:23:35.17:0,35,493	0/0:6,0:18:17.19:0,17,91	0/0:7,0:20:14.31:0,14,75	0/0:3,0:16:19.67:0,20,105	0/0:19,0:21:50.22:0,50,509	1/1:3,15:18:38.76:285,39,0	0/0:9,0:18:20.63:0,21,116	0/1:4,7:13:4.21:118,0,4	0/0:11,0:23:49.97:0,50,328	0/0:10,0:36:75.33:0,75,439	0/0:2,0:13:11.36:0,11,57	0/0:11,0:24:38.75:0,39,232	0/0:20,1:21:14.14:0,14,295	0/0:10,2:12:0.13:0,0,128	1/1:2,24:26:56.64:416,57,0	0/0:8,0:25:45.95:0,46,262	0/0:4,0:27:34.16:0,34,181	0/0:0,0:8:11.36:0,11,57
chr10	9495404	.	AT	A	7272.38	PASS	AB=0.880;AC=29;AF=0.518;AN=56;BaseQRankSum=10.583;DP=618;FS=12.218;HRun=10;HaplotypeScore=66.6002;InbreedingCoeff=0.8810;MQ=79.28;MQ0=0;MQRankSum=-1.621;QD=19.92;ReadPosRankSum=2.589;VQSLOD=5.0791;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,50:58:99:1226,124,0	0/0:9,0:9:21.06:0,21,232	0/0:24,0:24:51.10:0,51,538	0/0:21,0:21:35.84:0,36,332	1/1:5,23:28:62.88:537,63,0	1/1:3,15:18:41.99:365,42,0	1/1:4,24:28:44.61:549,45,0	1/1:5,23:28:68.95:591,69,0	1/1:3,19:22:56.98:495,57,0	1/1:2,25:27:74.98:651,75,0	1/1:3,18:21:53.98:469,54,0	0/0:23,2:25:23.05:0,23,690	0/0:16,0:16:45.12:0,45,495	0/0:16,1:17:25.44:0,25,484	1/1:0,7:7:21:182,21,0	1/1:0,25:25:65.99:573,66,0	0/0:27,0:27:60.61:0,61,655	1/1:4,16:20:44.99:390,45,0	0/0:22,0:22:57.14:0,57,622	0/0:24,0:24:66.18:0,66,730	0/0:10,1:11:0.98:0,1,221	0/0:27,0:28:65.21:0,65,734	1/1:4,18:23:53.02:449,53,0	1/1:1,10:11:29.95:253,30,0	1/1:5,22:27:59.97:521,60,0	0/1:19,3:22:21.02:21,0,474	0/0:23,1:24:46.11:0,46,720	0/0:5,0:5:6.02:0,6,66
chr10	9495887	.	C	CAGCAAATCG	37843.09	PASS	AB=0.872;AC=29;AF=0.518;AN=56;BaseQRankSum=-6.096;DP=758;FS=0.000;HRun=0;HaplotypeScore=182.8827;InbreedingCoeff=0.9279;MQ=68.09;MQ0=0;MQRankSum=-19.209;QD=88.21;ReadPosRankSum=-3.986;VQSLOD=4.0349;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,25:37:87.30:3949,87,0	0/0:9,0:9:27.09:0,27,854	0/0:13,0:13:29.75:0,30,719	0/0:17,0:17:41.24:0,41,1108	1/1:6,17:32:60.21:2569,60,0	1/1:2,10:22:30.10:1482,30,0	1/1:7,20:33:75.26:3575,75,0	1/1:14,11:36:99:4084,105,0	1/1:2,12:22:42.14:2074,42,0	1/1:7,17:34:96.29:3961,96,0	1/1:5,12:20:45.15:1932,45,0	0/0:40,0:40:99:0,120,3452	0/0:30,0:30:90.31:0,90,2725	0/0:28,0:28:84.29:0,84,2598	1/1:8,17:37:57.20:2797,57,0	1/1:10,12:35:63.22:2896,63,0	0/0:26,0:26:75.26:0,75,2286	1/1:4,6:16:24.08:1132,24,0	0/0:14,0:14:36.12:0,36,1098	0/0:29,0:29:81.28:0,81,2444	0/0:44,0:44:99:0,126,3903	0/0:36,0:36:99:0,105,3096	1/1:4,16:24:56.69:2612,57,0	1/1:9,10:25:48.16:1907,48,0	1/1:1,16:22:51.18:2518,51,0	0/1:29,3:34:99:355,0,2354	0/0:30,0:30:87.30:0,87,2746	0/0:13,0:13:39.11:0,39,1161
chr10	9496098	.	TGTGGGTCCTAGTCATTATAGATCCGCAAAATCTTGGATGTATAGATGCTATGA	T	3797.49	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=2.714;DP=493;FS=3.635;HRun=0;HaplotypeScore=591.2648;InbreedingCoeff=0.8017;MQ=92.19;MQ0=0;MQRankSum=-4.201;QD=130.95;ReadPosRankSum=0.617;VQSLOD=0.0766;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,0:3:6.02:110,6,0	0/0:15,0:15:45.15:0,45,6617	0/0:21,0:21:63.21:0,63,4781	0/0:23,0:23:66.70:0,67,4373	1/1:0,4:4:9.03:995,9,0	1/1:0,4:4:6.02:810,6,0	1/1:0,0:3:3.01:61,3,0	1/1:1,0:1:3:28,3,0	1/1:0,2:2:3.01:405,3,0	0/0:33,0:33:99:0,99,13684	0/0:22,0:22:66.23:0,66,11220	0/0:22,0:22:66.23:0,66,11213	0/0:29,0:29:87.28:0,87,11828	0/0:23,0:23:69.24:0,69,8472	0/0:27,0:27:81.26:0,81,11522	1/1:0,7:7:6.02:810,6,0	0/0:26,0:26:78.27:0,78,11284	1/1:0,3:3:3.01:405,3,0	0/0:22,0:22:66.23:0,66,7860	0/0:38,0:38:99:0,114,17912	0/0:16,0:16:48.16:0,48,7097	0/0:25,0:25:75.26:0,75,10072	0/0:33,0:33:99:0,99,14167	0/0:23,0:23:69.24:0,69,10933	1/1:2,0:2:6.02:173,6,0	0/0:28,0:28:84.29:0,84,10361	0/0:28,0:28:84.29:0,84,13847	0/0:10,0:10:30.10:0,30,3450
chr10	9497465	.	T	TGTGTG	988.48	PASS	AB=0.980;AC=9;AF=0.161;AN=56;BaseQRankSum=-0.681;DP=530;FS=8.731;HRun=0;HaplotypeScore=97.0440;InbreedingCoeff=0.5775;MQ=52.79;MQ0=37;MQRankSum=2.078;QD=8.99;ReadPosRankSum=2.669;VQSLOD=1.6560;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:36:74.99:0,75,955	0/0:7,0:6:12.04:0,12,174	0/0:17,0:6:11.98:0,12,119	0/0:27,0:10:5.36:0,5,109	0/0:7,0:6:12.04:0,12,153	0/0:16,0:16:29.70:0,30,392	0/0:29,0:28:56.58:0,57,774	0/0:26,0:25:63.20:0,63,780	0/1:23,0:23:5.94:6,0,690	1/1:7,6:10:9.03:168,9,0	0/1:15,0:12:1.22:265,0,1	0/0:13,0:13:28.17:0,28,339	0/0:12,0:12:30.10:0,30,404	0/0:16,0:16:27.09:0,27,363	0/1:12,0:12:23.12:244,0,23	0/0:12,0:12:27.03:0,27,323	0/0:35,0:33:81.25:0,81,1200	0/0:27,0:27:71.86:0,72,868	0/0:17,0:16:35.78:0,36,420	0/0:20,0:20:45.10:0,45,557	0/0:31,0:30:60.19:0,60,755	0/0:15,0:15:16.54:0,17,321	1/1:2,6:7:3.01:92,3,0	1/1:32,2:29:21.92:356,22,0	0/0:20,0:20:49.81:0,50,639	0/0:13,0:13:32.69:0,33,390	0/0:12,0:9:22.46:0,22,231	0/0:10,0:9:23.84:0,24,260
chr10	9497467	.	T	TGTG	722.84	PASS	AB=0.893;AC=9;AF=0.161;AN=56;BaseQRankSum=2.447;DP=525;FS=1.693;HRun=0;HaplotypeScore=78.2355;InbreedingCoeff=0.5781;MQ=52.05;MQ0=38;MQRankSum=1.191;QD=6.63;ReadPosRankSum=5.004;VQSLOD=1.8091;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:35:78.23:0,78,1011	0/0:7,0:6:12.04:0,12,164	0/0:19,0:6:11.98:0,12,119	0/0:27,0:7:5.36:0,5,109	0/0:7,0:6:12.04:0,12,153	0/0:17,0:17:35.93:0,36,433	0/0:29,0:28:59.80:0,60,783	0/0:27,0:26:69.20:0,69,843	0/1:22,0:22:2.92:3,0,671	1/1:10,0:7:9.03:121,9,0	1/1:10,6:12:14.04:209,14,0	0/0:13,0:13:29.59:0,30,365	0/0:12,0:12:30.10:0,30,392	0/0:17,0:17:30.08:0,30,380	0/1:12,0:12:29.02:180,0,29	0/0:12,0:12:27.08:0,27,332	0/0:35,0:33:81.26:0,81,1113	0/0:25,0:25:72.06:0,72,881	0/0:16,0:15:35.84:0,36,420	0/0:17,0:17:48.10:0,48,581	0/0:30,0:29:60.19:0,60,759	0/0:15,0:15:23.80:0,24,308	1/1:10,0:8:3.01:47,3,0	0/1:20,16:31:1.72:301,0,2	0/0:20,0:20:44.82:0,45,593	0/0:11,0:11:29.89:0,30,380	0/0:13,0:10:13.82:0,14,205	0/0:10,0:9:24.04:0,24,275
chr10	9497469	.	T	TG	352.88	PASS	AB=0.771;AC=7;AF=0.125;AN=56;BaseQRankSum=5.269;DP=525;FS=5.937;HRun=1;HaplotypeScore=61.4279;InbreedingCoeff=0.4104;MQ=51.31;MQ0=40;MQRankSum=2.394;QD=4.10;ReadPosRankSum=4.788;VQSLOD=0.6099;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:35:78.25:0,78,993	0/0:7,0:6:15.04:0,15,178	0/0:19,0:4:11.98:0,12,119	0/0:28,0:6:5.36:0,5,109	0/0:7,0:6:12.04:0,12,153	0/0:16,0:16:36.10:0,36,446	0/0:30,0:29:60.99:0,61,748	0/0:27,0:26:75.20:0,75,924	0/0:20,1:21:16.98:0,17,664	1/1:9,2:7:8.98:90,9,0	1/1:13,3:12:6.98:85,7,0	0/0:13,0:13:30.01:0,30,357	0/0:12,0:12:30.10:0,30,380	0/0:17,0:17:33.06:0,33,399	0/1:2,8:10:53.54:107,0,54	0/0:12,0:12:30.08:0,30,368	0/0:36,0:34:84.18:0,84,1039	0/0:25,0:25:72.15:0,72,877	0/0:14,0:13:35.91:0,36,416	0/0:18,0:18:47.94:0,48,568	0/0:32,0:31:63.18:0,63,782	0/0:13,0:13:26.99:0,27,308	0/1:9,1:8:14.74:15,0,31	0/1:32,6:32:99:186,0,172	0/0:20,0:20:49.67:0,50,588	0/0:11,0:11:32.47:0,32,388	0/0:13,0:10:24.84:0,25,267	0/0:10,0:9:24.05:0,24,284
chr10	9497576	.	CTTGGT	C	1923.83	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.622;DP=677;FS=3.906;HRun=0;HaplotypeScore=127.9192;InbreedingCoeff=0.9692;MQ=73.18;MQ0=2;MQRankSum=-0.516;QD=25.65;ReadPosRankSum=0.358;VQSLOD=3.5514;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,102,2869	0/0:7,0:7:21.07:0,21,571	0/0:40,0:35:24.47:0,24,800	0/0:36,0:28:48.15:0,48,1182	0/0:22,0:22:57.20:0,57,1601	0/0:19,0:19:42.09:0,42,1102	0/0:34,0:34:81.28:0,81,2259	0/0:31,0:31:33.10:0,33,888	0/0:26,0:26:72.25:0,72,2066	0/0:23,0:23:57.20:0,57,1604	0/0:17,0:17:36.10:0,36,876	0/0:35,0:35:87.30:0,87,2419	0/0:27,0:27:63.22:0,63,1779	0/0:20,0:20:30.10:0,30,863	0/0:18,0:18:51.18:0,51,1467	0/0:18,0:18:45.15:0,45,1295	0/0:27,0:26:72.23:0,72,2001	0/0:21,0:21:54.12:0,54,1290	1/1:14,8:22:27.03:437,27,0	1/1:10,16:26:51.17:957,51,0	1/1:8,19:27:36.12:672,36,0	0/0:21,0:21:54.17:0,54,1437	0/0:17,0:17:39.13:0,39,1067	0/0:30,0:30:66.18:0,66,1826	0/0:16,0:16:41.97:0,42,1130	0/0:32,0:32:75.26:0,75,2139	0/0:16,0:16:39.12:0,39,1060	0/0:5,0:5:7.42:0,7,338
chr10	9499447	.	CA	C	13700.96	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=11.136;DP=673;FS=2.097;HRun=4;HaplotypeScore=67.0298;InbreedingCoeff=0.9990;MQ=72.62;MQ0=0;MQRankSum=-2.980;QD=32.39;ReadPosRankSum=2.521;VQSLOD=5.5870;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,34:37:95.96:1127,96,0	0/0:14,0:14:42.14:0,42,584	0/0:23,0:20:53.85:0,54,628	0/0:35,0:32:68.30:0,68,973	1/1:2,26:28:75.23:897,75,0	1/1:0,18:18:51.16:612,51,0	1/1:0,15:15:36.11:432,36,0	1/1:2,33:35:64.47:1149,64,0	1/1:0,12:12:24.07:288,24,0	1/1:1,40:41:99:1403,117,0	1/1:0,18:18:54.16:645,54,0	0/0:27,0:27:81.26:0,81,1114	0/0:11,0:11:33.10:0,33,444	0/0:19,0:19:57.19:0,57,790	1/1:1,34:35:96.29:1152,96,0	1/1:1,16:17:45.14:540,45,0	0/0:34,1:35:61.45:0,61,1238	1/1:1,13:14:36.11:431,36,0	1/1:0,22:22:60.17:708,60,0	1/1:1,37:38:99:1332,111,0	1/1:1,21:22:54.16:648,54,0	0/0:31,0:31:90.26:0,90,1202	1/1:1,30:31:87.27:1041,87,0	1/1:0,23:23:60.18:720,60,0	1/1:1,16:17:48.15:576,48,0	0/0:26,0:26:72.23:0,72,990	0/0:21,0:21:60.20:0,60,836	0/0:8,0:8:21.07:0,21,294
chr10	9500115	.	T	TACACAC	4065.80	PASS	AB=0.775;AC=41;AF=0.788;AN=52;BaseQRankSum=2.945;DP=635;FS=0.000;HRun=0;HaplotypeScore=182.3215;InbreedingCoeff=0.2976;MQ=65.76;MQ0=17;MQRankSum=-3.708;QD=8.18;ReadPosRankSum=-3.471;VQSLOD=1.5677;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:31,0:32:6.90:54,7,0	1/1:8,0:8:5.95:44,6,0	./.	./.	1/1:9,0:19:1.26:35,1,0	0/0:16,0:23:1.06:0,1,2	0/0:16,0:16:0.88:0,1,2	1/1:26,0:23:2.98:22,3,0	0/0:14,0:14:18.06:0,18,361	1/1:32,0:31:25.89:399,26,0	1/1:27,0:27:15.05:202,15,0	1/1:14,1:16:12.04:321,12,0	0/1:13,4:24:42.55:329,0,43	1/1:6,4:16:9.03:242,9,0	1/1:27,0:27:38.96:428,39,0	0/0:12,0:19:6.53:0,7,31	1/1:17,4:25:4.26:95,4,0	0/1:14,0:16:68.10:68,0,70	1/1:11,1:16:13.25:139,13,0	1/1:14,0:21:15.05:191,15,0	1/1:15,0:29:3.01:38,3,0	1/1:12,8:23:6.02:192,6,0	1/1:26,0:26:17.90:141,18,0	1/1:26,0:26:14.54:163,15,0	0/1:18,0:27:16.28:16,0,21	1/1:23,2:27:34.79:568,35,0	1/1:15,1:25:11.94:230,12,0	1/1:3,0:6:6.02:150,6,0
chr10	9500120	.	A	ACACACA	4046.04	PASS	AB=1.000;AC=41;AF=0.788;AN=52;BaseQRankSum=2.848;DP=655;FS=0.000;HRun=0;HaplotypeScore=185.6176;InbreedingCoeff=0.2941;MQ=60.54;MQ0=18;MQRankSum=-3.859;QD=8.06;ReadPosRankSum=-3.095;VQSLOD=1.6558;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:36,0:35:6.90:54,7,0	1/1:7,0:7:5.95:44,6,0	./.	./.	1/1:18,0:18:1.26:35,1,0	0/0:24,0:24:1.26:0,1,3	0/0:19,0:17:0.87:0,1,2	1/1:27,0:24:2.98:22,3,0	0/0:20,0:20:17.75:0,18,361	1/1:34,0:33:25.89:399,26,0	1/1:28,0:28:12.37:198,12,0	1/1:14,4:19:12.04:321,12,0	0/1:25,0:25:42.55:329,0,43	1/1:20,0:20:9.03:242,9,0	1/1:27,0:27:35.98:407,36,0	0/0:23,0:23:6.53:0,7,31	1/1:23,0:23:4.26:95,4,0	0/1:18,0:18:66.52:94,0,67	1/1:15,0:13:13.25:139,13,0	1/1:20,0:20:15.05:191,15,0	1/1:26,0:25:3.01:38,3,0	1/1:25,0:25:6.02:192,6,0	1/1:25,0:25:20.91:196,21,0	1/1:27,0:27:14.54:163,15,0	0/1:26,0:26:16.28:16,0,21	1/1:25,0:25:31.83:548,32,0	1/1:25,0:25:8.93:174,9,0	1/1:6,0:6:6.02:150,6,0
chr10	9501286	.	GT	G	2594.26	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=10.614;DP=561;FS=0.892;HRun=7;HaplotypeScore=54.9481;InbreedingCoeff=0.9887;MQ=68.38;MQ0=1;MQRankSum=0.399;QD=23.58;ReadPosRankSum=1.577;VQSLOD=3.8653;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:42.12:0,42,514	0/0:8,0:8:24.08:0,24,302	0/0:11,0:10:12.92:0,13,136	0/0:11,0:9:23.86:0,24,213	0/0:30,0:30:84.25:0,84,1032	0/0:27,0:27:72.19:0,72,867	0/0:15,0:15:39.12:0,39,490	0/0:29,0:29:75.23:0,75,932	0/0:9,0:9:24.06:0,24,278	1/1:3,18:21:54.07:530,54,0	1/1:1,16:17:41.97:404,42,0	0/0:24,0:24:60.18:0,60,742	0/0:18,0:18:51.16:0,51,641	0/0:20,0:20:51.15:0,51,629	1/1:3,25:28:66.15:673,66,0	0/0:16,0:16:45.14:0,45,566	0/0:26,0:26:72.20:0,72,879	0/0:25,0:24:63.13:0,63,747	0/0:18,0:18:54.17:0,54,679	0/0:41,0:41:99:0,108,1319	0/0:6,0:6:15.05:0,15,189	0/0:15,0:15:36.11:0,36,442	1/1:1,30:31:78.07:795,78,0	1/1:1,12:13:36.08:367,36,0	0/0:34,0:34:99:0,99,1245	0/0:17,0:17:45.14:0,45,555	0/0:25,0:25:69.21:0,69,856	0/0:9,0:9:27.09:0,27,340
chr10	9502529	.	AAC	A	1817.61	PASS	AB=0.868;AC=14;AF=0.269;AN=52;BaseQRankSum=-2.438;DP=552;FS=7.794;HRun=0;HaplotypeScore=93.7734;InbreedingCoeff=0.3845;MQ=70.67;MQ0=5;MQRankSum=0.445;QD=7.80;ReadPosRankSum=1.261;VQSLOD=2.5780;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:28,3:30:25.13:204,0,25	0/0:3,0:9:6.01:0,6,71	./.	./.	1/1:12,16:29:44.36:423,44,0	0/1:11,9:21:31.08:186,0,31	1/1:6,10:16:24.06:264,24,0	0/1:24,0:24:22.33:22,0,69	0/0:11,0:19:13.82:0,14,123	0/0:15,0:15:20.98:0,21,182	0/0:14,0:14:8.40:0,8,109	0/0:9,0:15:21.48:0,21,216	0/1:16,1:24:9.06:9,0,167	0/0:9,0:13:14.79:0,15,131	0/0:15,0:21:9.80:0,10,80	1/1:10,9:20:17.88:179,18,0	0/0:13,0:18:20.51:0,21,186	0/1:10,7:17:6.96:115,0,7	0/0:12,0:14:18.40:0,18,199	0/0:11,0:18:19.94:0,20,215	0/0:11,0:16:12:0,12,120	0/1:8,1:19:3.03:3,0,239	0/0:27,0:26:8.74:0,9,91	0/0:12,0:16:2.92:0,3,26	1/1:11,20:32:55.74:580,56,0	0/0:11,0:18:29.91:0,30,276	0/0:19,0:30:20.99:0,21,180	0/0:2,0:6:12:0,12,105
chr10	9507560	.	GCACACACA	G	5876.24	PASS	AB=0.974;AC=24;AF=0.429;AN=56;BaseQRankSum=2.238;DP=556;FS=2.826;HRun=0;HaplotypeScore=215.6435;InbreedingCoeff=0.5010;MQ=57.44;MQ0=5;MQRankSum=-6.396;QD=20.55;ReadPosRankSum=0.402;VQSLOD=4.1586;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:34,0:34:99:154,0,250	1/1:8,0:8:15.05:363,15,0	0/0:24,0:15:9.03:0,9,185	0/0:17,0:11:12.03:0,12,295	0/1:16,0:16:21.43:21,0,89	0/1:14,0:14:92.76:93,0,109	0/0:12,0:11:15.62:0,16,90	0/0:25,0:23:17.11:0,17,120	0/1:19,0:19:8.15:8,0,260	0/0:23,0:25:63.54:0,64,1837	0/0:21,0:22:27.09:0,27,830	1/1:10,2:12:15.05:326,15,0	1/1:18,3:21:26.69:578,27,0	1/1:21,4:26:39.13:727,39,0	0/0:34,0:34:48.16:0,48,1578	0/1:12,0:13:41.62:42,0,54	1/1:23,2:25:36.07:714,36,0	0/1:10,0:10:19.14:19,0,178	0/0:18,0:17:18.06:0,18,481	0/0:20,0:19:24.07:0,24,668	0/0:8,0:9:6.02:0,6,182	1/1:33,1:32:0.78:474,1,0	0/0:24,0:24:33.01:0,33,1060	0/0:27,0:26:32.67:0,33,973	0/0:12,0:11:18.12:0,18,117	1/1:17,3:21:44.16:935,44,0	1/1:19,1:21:48.16:999,48,0	1/1:10,0:8:21.07:422,21,0
chr10	9507585	.	CACACACACAGAGAGAGAG	C	10422.53	PASS	AB=1.000;AC=25;AF=0.446;AN=56;BaseQRankSum=2.272;DP=558;FS=4.457;HRun=0;HaplotypeScore=285.7886;InbreedingCoeff=0.4904;MQ=45.65;MQ0=13;MQRankSum=-6.706;QD=34.06;ReadPosRankSum=3.424;VQSLOD=3.5236;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:24:85.45:85,0,755	1/1:8,2:10:21.07:706,21,0	0/0:5,0:3:9.03:0,9,185	0/0:10,0:5:12.03:0,12,295	0/1:22,0:20:17.14:17,0,151	0/1:15,0:14:65.98:66,0,150	0/0:13,0:10:20.06:0,20,237	0/0:26,0:22:44.94:0,45,422	0/0:27,0:27:27.98:0,28,535	0/0:35,0:35:96.06:0,96,2997	0/0:23,0:22:36.12:0,36,1276	1/1:12,1:13:15.05:407,15,0	1/1:16,4:20:43.09:1321,43,0	1/1:22,6:28:42.14:1498,42,0	0/0:36,0:36:54.19:0,54,1967	0/1:9,0:9:5.96:6,0,87	1/1:21,4:25:41.01:1242,41,0	0/1:9,0:8:16.07:16,0,430	0/1:17,0:14:34.62:35,0,627	0/1:20,0:19:5.55:6,0,691	0/0:11,0:9:6.01:0,6,207	1/1:30,3:30:11.14:921,11,0	0/0:24,0:23:42.20:0,42,1369	0/0:29,0:28:48.14:0,48,1314	0/0:13,0:12:22.31:0,22,403	1/1:20,3:23:62.12:1581,62,0	1/1:19,6:25:57.20:1851,57,0	1/1:7,2:8:21.07:664,21,0
chr10	9507587	.	CACACACAGAGAGAGAG	C	8143.82	PASS	AB=1.000;AC=28;AF=0.500;AN=56;BaseQRankSum=4.684;DP=538;FS=6.881;HRun=0;HaplotypeScore=268.3401;InbreedingCoeff=0.2817;MQ=44.14;MQ0=13;MQRankSum=-5.034;QD=24.09;ReadPosRankSum=2.401;VQSLOD=2.9020;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:21:99:151,0,488	1/1:9,0:9:21.07:555,21,0	0/0:4,0:2:6.02:0,6,100	0/0:9,0:4:9.03:0,9,188	0/1:22,0:20:28.85:92,0,29	0/1:13,0:12:18.94:97,0,19	0/1:12,0:9:8.43:8,0,31	0/1:25,0:21:51.73:52,0,316	0/0:27,0:27:7.90:0,8,304	0/0:36,0:36:99:0,99,2314	0/0:23,0:22:36.02:0,36,983	1/1:12,0:12:15.05:285,15,0	1/1:19,0:19:37.43:1027,37,0	1/1:26,1:27:42.11:1095,42,0	0/0:36,0:36:57.16:0,57,1611	0/1:9,0:9:22.65:105,0,23	1/1:25,0:25:37.85:887,38,0	0/1:9,0:8:60.55:61,0,299	0/1:16,0:13:65.24:65,0,477	0/1:19,0:18:8.54:9,0,479	0/0:12,0:10:6:0,6,159	1/1:26,3:26:30.06:735,30,0	0/0:24,0:23:40.54:0,41,1070	0/0:29,0:28:45.10:0,45,1023	0/1:13,0:12:2.22:2,0,167	1/1:22,0:22:56.58:1147,57,0	1/1:23,0:23:57.19:1343,57,0	1/1:9,0:8:21.05:428,21,0
chr10	9507593	.	CAGAGAGAGAG	C	4168.76	PASS	AB=0.943;AC=21;AF=0.404;AN=52;BaseQRankSum=9.442;DP=557;FS=38.090;HRun=0;HaplotypeScore=258.4160;InbreedingCoeff=0.6297;MQ=42.54;MQ0=12;MQRankSum=-6.755;QD=17.74;ReadPosRankSum=4.950;VQSLOD=0.9733;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:21:29.32:0,29,562	1/1:5,3:9:14.88:326,15,0	./.	./.	0/0:27,0:23:5.28:0,5,117	0/0:18,0:17:14.47:0,14,119	0/0:14,0:11:7:0,7,39	0/0:36,0:32:74.91:0,75,1532	1/1:27,0:27:3.78:12,4,0	0/0:35,0:34:64.53:0,65,1121	0/0:23,0:22:30.07:0,30,532	1/1:7,5:12:2.13:78,2,0	1/1:15,3:18:23.46:634,23,0	1/1:22,3:25:18.02:663,18,0	0/0:37,0:37:42.07:0,42,740	0/0:10,0:10:14.96:0,15,99	1/1:23,1:24:16.30:437,16,0	0/0:12,0:11:24.03:0,24,455	0/1:18,0:15:93.58:94,0,191	1/1:21,0:20:2.64:32,3,0	0/0:12,0:10:2.90:0,3,17	0/1:23,5:25:2.82:430,0,3	0/0:25,0:23:21.01:0,21,481	0/0:25,0:24:26.96:0,27,492	0/0:17,0:16:15.88:0,16,293	1/1:16,4:20:27.98:619,28,0	1/1:17,6:23:12.39:692,12,0	0/1:9,0:8:23.67:152,0,24
chr10	9507619	.	GACAGAGAC	G	5929.44	PASS	AB=0.996;AC=41;AF=0.732;AN=56;BaseQRankSum=0.922;DP=634;FS=14.649;HRun=0;HaplotypeScore=215.8470;InbreedingCoeff=-0.1374;MQ=56.51;MQ0=14;MQRankSum=-4.258;QD=9.80;ReadPosRankSum=-0.065;VQSLOD=2.2793;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:22:3.66:4,0,241	1/1:8,0:8:14.80:291,15,0	0/1:24,0:13:4.47:4,0,328	0/1:58,0:19:39.67:40,0,226	0/0:29,0:25:4.22:0,4,147	0/1:22,0:21:60.93:61,0,96	1/1:12,0:9:1.30:2,1,0	0/1:50,0:48:99:111,0,1115	1/1:0,27:29:8.82:252,9,0	0/1:27,0:27:99:218,0,112	0/1:23,0:22:18.59:19,0,88	1/1:15,0:15:3.01:69,3,0	1/1:21,0:21:31.87:563,32,0	1/1:23,0:23:30.57:616,31,0	0/1:29,0:29:6.57:7,0,145	0/1:16,0:16:72.98:82,0,73	1/1:22,0:22:20.46:372,20,0	0/1:11,0:10:26.09:26,0,201	1/1:12,4:13:31.31:544,31,0	1/1:17,5:21:32.90:568,33,0	1/1:2,9:9:3.01:36,3,0	1/1:25,0:23:18.06:367,18,0	0/1:23,0:21:8.48:8,0,117	0/1:23,0:22:14.54:15,0,59	0/1:18,0:17:84.81:85,0,156	1/1:18,0:18:47.96:724,48,0	1/1:26,0:26:36.81:710,37,0	1/1:6,0:5:7.79:136,8,0
chr10	9507623	.	GAGAC	G	7480.93	PASS	AB=1.000;AC=46;AF=0.821;AN=56;BaseQRankSum=1.532;DP=634;FS=18.367;HRun=0;HaplotypeScore=184.2861;InbreedingCoeff=0.1840;MQ=60.95;MQ0=12;MQRankSum=-1.218;QD=13.93;ReadPosRankSum=4.054;VQSLOD=3.1637;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:21:43.87:44,0,68	1/1:0,8:8:14.89:257,15,0	0/0:30,0:19:35.34:0,35,377	0/0:66,0:26:31.03:0,31,331	0/1:30,0:26:26.36:84,0,26	1/1:21,0:20:15.98:104,16,0	1/1:13,0:10:5.71:50,6,0	0/1:51,0:48:99:448,0,416	1/1:27,2:29:8.92:101,9,0	1/1:4,24:27:72.54:1153,73,0	1/1:3,16:18:17.96:269,18,0	1/1:1,16:17:3.01:54,3,0	1/1:2,18:20:29.99:469,30,0	1/1:2,18:20:30.10:533,30,0	1/1:3,26:29:18.82:370,19,0	0/1:15,0:15:9.17:78,0,9	1/1:1,19:20:19.27:323,19,0	0/1:11,0:10:40.19:40,0,86	1/1:14,0:12:21.49:205,21,0	1/1:23,0:22:32.91:274,33,0	1/1:11,0:9:2.92:17,3,0	1/1:4,17:19:18.03:289,18,0	1/1:6,16:20:1.86:214,2,0	1/1:2,21:22:18.06:341,18,0	0/1:19,0:18:24.33:102,0,24	1/1:2,16:18:48.10:806,48,0	1/1:1,24:25:35.63:617,36,0	1/1:4,2:5:15.05:241,15,0
chr10	9507627	.	C	CAG	3084.60	PASS	AB=0.961;AC=37;AF=0.661;AN=56;BaseQRankSum=-3.298;DP=636;FS=74.591;HRun=0;HaplotypeScore=185.9801;InbreedingCoeff=0.1944;MQ=63.20;MQ0=9;MQRankSum=-1.703;QD=6.56;ReadPosRankSum=-1.575;VQSLOD=0.2905;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:12,13:22:14.55:164,15,0	1/1:8,0:8:5.97:39,6,0	0/0:38,0:25:58.09:0,58,540	0/0:73,0:30:20.39:0,20,356	1/1:13,17:27:14.97:245,15,0	1/1:7,16:22:15.05:234,15,0	1/1:5,9:12:6.02:98,6,0	1/1:38,13:47:76.59:1010,77,0	0/0:29,0:29:7.83:0,8,32	0/1:26,0:25:62.26:210,0,62	0/1:16,0:16:16.31:21,0,16	0/1:16,0:16:0.42:0,0,1	0/1:19,0:19:16.28:59,0,16	1/1:18,0:18:3.01:35,3,0	0/1:28,0:28:20.45:20,0,28	1/1:4,10:14:12.04:179,12,0	1/1:21,0:21:5.94:49,6,0	0/1:5,4:10:25.53:95,0,26	0/0:14,0:12:6.93:0,7,34	0/1:22,0:21:2.05:27,0,2	0/0:12,0:10:0.47:0,0,1	1/1:20,0:18:1.66:4,2,0	0/1:18,0:17:18.36:18,0,50	0/1:23,0:22:16.73:17,0,29	1/1:10,9:19:9.03:147,9,0	1/1:18,0:18:33.79:318,34,0	1/1:24,0:24:13.41:128,13,0	1/1:6,0:5:8.68:132,9,0
chr10	9510400	.	C	CTGTGTGTGTG	614.98	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=-0.117;DP=597;FS=0.804;HRun=0;HaplotypeScore=187.6314;InbreedingCoeff=0.3020;MQ=46.35;MQ0=20;MQRankSum=-1.117;QD=3.42;ReadPosRankSum=-2.125;VQSLOD=2.3715;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:16:5.95:0,6,89	0/0:14,0:14:30.10:0,30,901	0/0:5,0:1:0:0,0,0	0/0:7,0:1:3.01:0,3,45	0/0:19,0:18:11.54:0,12,145	0/0:25,0:24:21.54:0,22,519	0/1:19,0:17:67.94:68,0,205	0/1:21,0:20:99:103,0,347	0/0:25,0:25:52.69:0,53,1122	0/1:22,0:20:99:140,0,215	1/1:15,0:14:2.87:96,3,0	0/0:19,0:19:38.93:0,39,1134	0/0:28,0:28:61.63:0,62,1695	0/0:31,0:31:44.32:0,44,1563	0/0:14,9:26:2.37:0,2,9	0/1:16,0:12:17.69:86,0,18	0/0:30,0:27:56.22:0,56,1321	1/1:4,0:3:6.02:175,6,0	0/0:19,0:19:37.03:0,37,810	1/1:25,0:25:2.45:23,2,0	0/0:40,0:38:6.06:0,6,234	0/0:31,0:31:30.08:0,30,697	0/1:19,0:19:6.48:17,0,6	1/1:23,0:23:1.61:5,2,0	1/1:16,0:15:3.01:50,3,0	0/0:27,0:25:38.35:0,38,1427	0/0:29,0:29:62.63:0,63,1585	0/0:20,0:17:40.05:0,40,1127
chr10	9510402	.	CTCTGTG	C	3201.93	PASS	AB=1.000;AC=20;AF=0.357;AN=56;BaseQRankSum=-0.445;DP=583;FS=43.661;HRun=0;HaplotypeScore=140.7338;InbreedingCoeff=-0.0824;MQ=46.72;MQ0=21;MQRankSum=3.909;QD=8.36;ReadPosRankSum=0.185;VQSLOD=1.1977;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:15:2.93:0,3,25	0/1:13,0:13:95.17:121,0,95	0/0:5,0:1:0:0,0,0	0/0:3,0:1:2.99:0,3,24	0/0:19,0:18:11.49:0,11,187	0/0:24,0:23:24.44:0,24,315	0/0:19,0:17:15.47:0,15,134	0/0:20,0:19:29.79:0,30,268	0/0:26,0:26:52.49:0,52,724	0/1:23,0:21:18.05:18,0,445	0/1:15,0:14:11.23:11,0,126	0/1:19,0:19:99:179,0,127	0/1:28,0:28:92.92:519,0,93	0/1:30,0:30:44.98:310,0,45	1/1:25,0:23:2.48:14,2,0	0/0:16,0:12:6.02:0,6,84	0/1:27,0:24:81.48:458,0,81	0/0:4,0:3:6.02:0,6,107	0/1:20,0:19:2.41:228,0,2	1/1:10,14:24:2.19:35,2,0	1/1:39,0:38:35.66:273,36,0	0/0:29,0:29:2.69:0,3,147	1/1:7,0:22:6.26:37,6,0	0/1:22,0:22:10.77:11,0,39	0/0:16,0:15:6.02:0,6,80	0/1:28,0:26:99:443,0,189	0/1:28,0:28:99:378,0,129	0/1:20,0:17:52.25:326,0,52
chr10	9510404	.	CTGTG	C	3804.12	PASS	AB=0.906;AC=25;AF=0.446;AN=56;BaseQRankSum=-2.622;DP=610;FS=38.834;HRun=0;HaplotypeScore=138.1463;InbreedingCoeff=0.6458;MQ=46.24;MQ0=19;MQRankSum=4.386;QD=10.63;ReadPosRankSum=2.241;VQSLOD=1.0793;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:15,0:22:0.07:0,0,0	1/1:13,0:13:13.01:194,13,0	0/0:4,0:1:0:0,0,0	0/0:2,0:1:2.99:0,3,24	0/0:20,0:19:5.38:0,5,87	0/0:25,0:24:12.01:0,12,144	0/0:22,0:20:5.89:0,6,79	0/0:22,0:21:28.26:0,28,331	0/0:24,0:24:30.45:0,30,435	0/0:24,0:22:39.01:0,39,491	0/0:16,0:15:9.01:0,9,139	1/1:18,0:19:17.64:236,18,0	1/1:27,0:29:34.63:683,35,0	1/1:29,1:30:40.75:566,41,0	0/1:26,0:23:0:0,0,1	0/0:17,0:13:9.03:0,9,119	1/1:24,0:24:37.54:548,38,0	0/0:5,0:4:9.03:0,9,150	1/1:14,5:18:14.66:223,15,0	1/1:24,0:24:2.59:35,3,0	1/1:18,0:38:3.01:46,3,0	1/1:16,14:30:2.74:12,3,0	0/0:22,0:22:1.96:0,2,6	0/0:17,0:28:7.36:0,7,52	0/0:21,0:20:5.94:0,6,74	0/1:17,11:26:11.54:407,0,12	1/1:26,0:28:19.69:449,20,0	1/1:20,0:18:27.09:405,27,0
chr10	9511898	.	A	ATCT	12120.41	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-13.737;DP=678;FS=0.648;HRun=0;HaplotypeScore=90.6951;InbreedingCoeff=0.9980;MQ=70.33;MQ0=0;MQRankSum=-5.483;QD=52.70;ReadPosRankSum=0.724;VQSLOD=7.1051;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,102,1657	0/0:10,0:10:30.09:0,30,465	0/0:18,0:17:36.06:0,36,507	0/0:16,0:16:16.77:0,17,409	0/0:33,0:33:96.31:0,96,1540	0/0:25,0:25:69.20:0,69,1053	0/0:24,0:24:66.18:0,66,983	0/0:21,0:21:57.18:0,57,866	1/1:1,21:24:63.22:1389,63,0	1/1:2,27:29:81.26:1744,81,0	1/1:3,17:21:48.12:983,48,0	0/0:19,0:19:48.03:0,48,736	0/0:26,0:26:75.26:0,75,1217	0/0:15,0:15:39.10:0,39,567	1/1:1,26:28:66.23:1445,66,0	0/0:32,0:32:93.29:0,93,1469	0/0:39,0:39:99:0,113,1742	0/0:17,0:17:45.14:0,45,696	1/1:5,25:33:96.25:1791,96,0	1/1:2,25:28:75.19:1603,75,0	1/1:0,14:16:30.10:660,30,0	0/0:28,0:28:81.27:0,81,1296	1/1:5,16:22:44.73:983,45,0	1/1:3,25:29:69.24:1521,69,0	0/0:30,0:30:87.27:0,87,1354	0/0:23,0:23:69.22:0,69,1080	0/0:25,0:25:72.25:0,72,1175	0/0:11,0:11:27.09:0,27,441
chr10	9512630	.	C	CT	6956.57	PASS	AB=0.821;AC=50;AF=0.893;AN=56;BaseQRankSum=-1.186;DP=472;FS=0.963;HRun=11;HaplotypeScore=94.9707;InbreedingCoeff=0.0944;MQ=53.28;MQ0=6;MQRankSum=-1.493;QD=14.99;ReadPosRankSum=0.183;VQSLOD=5.1360;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:17,17:34:29.43:627,29,0	1/1:7,3:11:23.37:206,23,0	0/0:8,0:3:0.11:0,0,18	0/1:6,0:4:8.74:9,0,15	1/1:12,10:25:47.62:425,48,0	1/1:2,13:16:41.95:410,42,0	0/1:7,5:11:47.43:95,0,47	1/1:12,22:34:56.06:704,56,0	1/1:6,0:9:10.36:59,10,0	1/1:8,2:22:45.46:256,45,0	1/1:9,0:15:15.34:85,15,0	1/1:9,6:17:38.74:348,39,0	1/1:9,4:13:29.51:263,30,0	1/1:13,7:20:27.55:406,28,0	1/1:7,0:14:5.61:119,6,0	1/1:5,11:17:41.92:407,42,0	0/1:15,6:21:22.10:243,0,22	1/1:11,6:16:12.36:260,12,0	1/1:6,1:21:40.09:240,40,0	1/1:8,1:19:29.17:165,29,0	1/1:8,2:10:11.79:94,12,0	0/1:14,4:18:10.18:251,0,10	1/1:8,1:12:20.26:124,20,0	1/1:7,0:12:23.12:134,23,0	1/1:8,14:22:30.81:476,31,0	1/1:8,5:16:29.46:233,29,0	1/1:12,4:16:29.98:291,30,0	1/1:1,2:3:3.01:30,3,0
chr10	9512646	.	CT	C	4557.27	PASS	AB=0.785;AC=42;AF=0.750;AN=56;BaseQRankSum=1.697;DP=451;FS=5.787;HRun=11;HaplotypeScore=91.4442;InbreedingCoeff=0.4802;MQ=47.53;MQ0=17;MQRankSum=-1.026;QD=11.17;ReadPosRankSum=3.365;VQSLOD=4.5661;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:17,17:32:53.85:434,54,0	1/1:7,9:15:26.94:221,27,0	0/0:6,0:2:2.97:0,3,20	0/0:5,0:3:0:0,0,0	1/1:11,15:27:32.40:324,32,0	1/1:2,14:16:29.91:245,30,0	1/1:2,7:9:14.08:124,14,0	1/1:13,16:30:49.89:395,50,0	1/1:4,3:7:1.57:43,2,0	1/1:12,8:19:26.90:219,27,0	1/1:8,8:16:14.91:122,15,0	0/1:10,4:14:3.26:126,0,3	1/1:8,3:11:26.74:211,27,0	1/1:11,10:21:14.58:270,15,0	1/1:6,11:17:23.91:197,24,0	1/1:13,6:19:29.57:241,30,0	1/1:16,6:18:20.94:172,21,0	1/1:12,7:17:20.99:158,21,0	0/1:17,0:18:2.40:2,0,187	0/0:19,0:18:45.06:0,45,454	0/0:8,1:7:9.01:0,9,89	1/1:8,9:17:0.96:214,1,0	1/1:7,8:12:26.92:215,27,0	1/1:8,5:11:17.90:144,18,0	0/1:11,5:16:4.96:167,0,5	0/1:7,8:12:4.17:168,0,4	1/1:8,4:12:17.96:147,18,0	0/0:3,0:2:0:0,0,0
chr10	9515118	.	GA	G	11576.23	PASS	AB=0.946;AC=54;AF=0.964;AN=56;BaseQRankSum=-4.007;DP=577;FS=2.124;HRun=10;HaplotypeScore=62.9856;InbreedingCoeff=0.2959;MQ=81.30;MQ0=1;MQRankSum=-5.032;QD=20.06;ReadPosRankSum=2.948;VQSLOD=5.8904;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,25:27:65.98:573,66,0	1/1:1,5:6:15:130,15,0	0/1:17,1:18:2.59:3,0,206	0/1:15,1:15:12.43:12,0,150	1/1:1,37:38:92.45:806,92,0	1/1:3,19:23:58.80:500,59,0	1/1:1,12:13:35.99:313,36,0	1/1:6,23:28:62.97:547,63,0	1/1:2,18:20:53.99:469,54,0	1/1:6,19:25:56.98:495,57,0	1/1:1,18:18:50.98:443,51,0	1/1:3,23:26:62.98:547,63,0	1/1:3,22:25:65.98:573,66,0	1/1:2,11:14:13:221,13,0	1/1:2,12:14:35.99:313,36,0	1/1:3,20:23:53.98:469,54,0	1/1:1,12:13:35.99:313,36,0	1/1:3,12:16:19.85:297,20,0	1/1:1,23:24:68.99:599,69,0	1/1:2,29:31:65.92:573,66,0	1/1:2,14:16:35.99:313,36,0	1/1:0,23:24:65.01:551,65,0	1/1:1,22:23:59.55:520,60,0	1/1:0,16:16:44.99:391,45,0	1/1:2,14:16:35.99:313,36,0	1/1:2,29:31:50.78:670,51,0	1/1:6,11:17:32.97:286,33,0	1/1:0,13:13:38.99:339,39,0
chr10	9515389	.	C	CCACA	1392.77	PASS	AB=0.911;AC=11;AF=0.196;AN=56;BaseQRankSum=6.692;DP=958;FS=5.932;HRun=0;HaplotypeScore=292.6391;InbreedingCoeff=0.3898;MQ=53.78;MQ0=17;MQRankSum=-4.140;QD=5.44;ReadPosRankSum=-3.350;VQSLOD=0.7374;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:44:82.02:0,82,1286	0/0:6,0:6:12.03:0,12,165	0/0:36,0:14:25.49:0,25,363	0/0:32,0:5:9.03:0,9,115	0/0:36,0:35:99:0,99,1571	0/0:27,0:28:57.16:0,57,907	0/0:33,0:34:60:0,60,1000	0/0:35,0:33:69.49:0,69,996	0/0:37,0:37:95.96:0,96,1479	1/1:38,5:41:10.96:622,11,0	0/1:24,4:27:16.04:223,0,16	0/0:46,0:44:99:0,114,1793	0/0:43,0:42:99:0,102,1614	0/0:43,0:43:93.24:0,93,1430	1/1:28,4:31:18.05:339,18,0	0/0:49,0:49:99:0,135,2127	0/0:35,0:37:87.38:0,87,1503	0/0:24,0:24:56.28:0,56,1018	0/1:26,0:26:43.92:44,0,140	0/1:30,0:30:39.29:39,0,149	0/0:48,0:48:3.44:0,3,288	0/0:33,0:33:72.22:0,72,1221	0/1:28,3:33:7.27:108,0,7	1/1:31,0:39:7.33:145,7,0	0/0:24,0:24:60.19:0,60,982	0/0:42,0:42:99:0,117,1893	0/0:22,0:22:57.12:0,57,888	0/1:14,0:16:30.77:31,0,453
chr10	9515390	.	CACAT	C	1135.84	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=5.254;DP=958;FS=9.866;HRun=0;HaplotypeScore=277.0117;InbreedingCoeff=0.3503;MQ=53.70;MQ0=17;MQRankSum=2.965;QD=3.82;ReadPosRankSum=-1.486;VQSLOD=0.7385;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:44:27.44:0,27,635	0/0:6,0:6:11.95:0,12,94	0/0:35,0:13:19.06:0,19,232	0/0:34,0:8:14.58:0,15,148	0/0:36,0:35:41.92:0,42,625	0/0:26,0:26:19.57:0,20,381	0/0:35,0:35:11.55:0,12,374	0/0:36,0:34:48.47:0,48,584	0/0:37,0:37:49.48:0,49,675	0/1:45,0:42:99:198,0,361	0/0:28,0:26:1.15:0,1,209	0/0:45,1:44:7.75:0,8,681	0/0:43,0:42:95.37:0,95,709	0/0:43,0:43:91.53:0,92,750	0/1:37,0:32:50.91:51,0,178	0/0:48,1:49:21.30:0,21,850	0/0:37,0:37:60.33:0,60,700	0/0:24,0:24:66.22:0,66,521	1/1:26,0:25:24.08:211,24,0	1/1:29,3:32:6.60:171,7,0	1/1:47,2:48:51.11:504,51,0	0/1:35,0:34:5.56:6,0,467	0/1:33,0:32:52.08:52,0,72	0/1:40,0:39:99:100,0,106	0/0:24,0:24:56.81:0,57,443	0/0:40,0:41:87.97:0,88,921	0/0:21,0:21:24.85:0,25,347	0/0:15,0:15:4.96:0,5,164
chr10	9515392	.	CAT	C	5903.03	PASS	AB=0.980;AC=31;AF=0.554;AN=56;BaseQRankSum=7.889;DP=956;FS=20.380;HRun=0;HaplotypeScore=231.4999;InbreedingCoeff=-0.5280;MQ=53.44;MQ0=17;MQRankSum=2.171;QD=6.69;ReadPosRankSum=6.434;VQSLOD=2.8124;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:44,0:43:99:106,0,349	0/1:5,0:5:13.25:13,0,63	0/0:36,0:12:19.06:0,19,212	0/0:36,0:8:10.14:0,10,137	0/1:35,2:36:56.45:268,0,56	0/1:23,1:24:54.46:54,0,127	0/1:30,0:30:74.91:75,0,113	0/1:36,0:34:56.60:57,0,281	0/1:36,0:36:99:213,0,189	0/1:48,0:45:80.78:385,0,81	0/1:28,0:26:16.08:16,0,73	0/1:41,3:42:99:322,0,111	1/1:40,3:42:2.20:359,2,0	0/1:39,1:40:99:122,0,296	0/1:34,1:30:37.38:66,0,37	0/1:48,1:49:99:240,0,310	0/1:37,2:39:67.26:299,0,67	0/1:25,0:25:99:103,0,136	1/1:19,7:25:47.98:535,48,0	1/1:17,16:33:65.65:744,66,0	1/1:36,17:52:95.67:1002,96,0	0/1:35,0:34:83.57:84,0,132	0/1:33,0:32:15.77:78,0,16	0/1:41,0:40:4.50:185,0,4	0/1:24,0:25:91.40:114,0,91	0/1:38,2:40:99:171,0,296	0/1:19,1:20:57.91:147,0,58	1/1:13,1:14:13.53:144,14,0
chr10	9515394	.	TAC	T	11155.40	PASS	AB=0.833;AC=40;AF=0.741;AN=54;BaseQRankSum=-10.385;DP=967;FS=0.458;HRun=0;HaplotypeScore=220.3885;InbreedingCoeff=0.7684;MQ=53.09;MQ0=18;MQRankSum=6.771;QD=15.85;ReadPosRankSum=6.341;VQSLOD=4.3402;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:23,22:45:47.99:350,0,48	1/1:3,2:5:3.01:35,3,0	./.	0/0:39,0:8:12.74:0,13,129	1/1:7,28:36:82.93:892,83,0	1/1:10,13:24:24.97:351,25,0	1/1:9,20:31:44.76:466,45,0	1/1:18,15:32:10.86:365,11,0	1/1:11,22:35:65.86:721,66,0	0/0:50,0:47:71.10:0,71,682	0/0:29,0:27:29.08:0,29,306	1/1:23,21:43:95.56:1006,96,0	1/1:10,32:42:87.25:1000,87,0	1/1:19,23:42:44.99:520,45,0	0/0:33,0:28:26.39:0,26,224	1/1:18,28:48:83.63:899,84,0	1/1:19,21:41:71.87:909,72,0	1/1:13,11:24:47.10:500,47,0	1/1:22,0:21:20.83:155,21,0	0/1:35,0:35:11.59:184,0,12	1/1:55,0:54:39.77:268,40,0	1/1:9,24:35:48.74:526,49,0	0/0:32,0:31:19.59:0,20,176	0/0:41,0:40:21.12:0,21,178	1/1:8,17:25:39.08:453,39,0	1/1:18,23:42:74.55:787,75,0	1/1:6,13:20:41.96:464,42,0	1/1:4,9:14:23.53:306,24,0
chr10	9515457	.	TAC	T	10401.58	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=11.222;DP=1137;FS=4.504;HRun=0;HaplotypeScore=247.4166;InbreedingCoeff=0.9848;MQ=57.05;MQ0=5;MQRankSum=-5.721;QD=27.59;ReadPosRankSum=1.532;VQSLOD=5.0372;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:47:93.47:0,93,1568	0/0:4,0:4:12.04:0,12,192	0/0:39,0:31:65.91:0,66,965	0/0:64,0:49:99:0,106,1607	0/0:33,0:32:78.25:0,78,1315	0/0:35,0:35:90.22:0,90,1409	0/0:27,0:27:57.18:0,57,944	0/0:46,0:46:99:0,114,1817	0/0:42,0:42:99:0,108,1776	1/1:8,54:61:99:2146,161,0	1/1:9,23:32:71.93:805,72,0	0/0:51,0:50:99:0,135,2245	0/0:51,0:51:99:0,132,2191	0/0:53,0:53:99:0,118,2133	1/1:7,42:44:99:1499,120,0	0/0:42,0:42:99:0,117,1902	0/0:44,0:44:99:0,103,1776	0/0:29,2:31:11.62:0,12,1276	1/1:12,18:30:66.11:808,66,0	1/1:3,45:48:99:1593,126,0	1/1:16,54:65:99:1836,149,0	0/0:42,0:42:99:0,108,1689	1/1:9,26:35:65.77:852,66,0	1/1:15,36:47:80.05:862,80,0	0/0:25,0:25:66.11:0,66,987	0/0:48,3:51:12.65:0,13,1945	0/0:17,0:16:42.14:0,42,702	0/0:13,0:13:34.08:0,34,445
chr10	9515531	.	A	AAC	10547.82	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=19.895;DP=1229;FS=19.238;HRun=0;HaplotypeScore=230.7852;InbreedingCoeff=0.9988;MQ=51.47;MQ0=19;MQRankSum=-11.456;QD=31.39;ReadPosRankSum=-4.453;VQSLOD=2.9268;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,121,1514	0/0:11,0:11:30.10:0,30,390	0/0:73,0:32:57.47:0,57,762	0/0:57,0:17:42.09:0,42,513	0/0:30,0:30:72.23:0,72,921	0/0:33,0:33:87.26:0,87,1103	0/0:31,0:32:71.47:0,71,965	0/0:64,0:63:99:0,132,1682	0/0:60,0:60:99:0,168,2138	1/1:15,39:51:99:2249,138,0	1/1:7,23:29:69.20:1110,69,0	0/0:60,0:59:99:0,162,2036	0/0:46,0:46:99:0,100,1351	0/0:62,0:62:99:0,169,2178	1/1:18,30:45:99:1758,114,0	0/0:57,0:57:99:0,159,2003	0/0:40,0:41:83.46:0,83,1098	0/0:41,0:41:97.71:0,98,1268	1/1:15,12:26:18.99:747,19,0	1/1:15,24:39:58.47:1330,58,0	1/1:40,28:61:92.33:1412,92,0	0/0:42,0:42:99:0,111,1427	1/1:6,22:27:69.23:1097,69,0	1/1:23,14:33:50.95:845,51,0	0/0:27,0:27:69.16:0,69,841	0/0:65,0:64:99:0,171,2175	0/0:26,0:26:69.22:0,69,895	0/0:20,0:21:39.10:0,39,504
chr10	9515558	.	T	TAC	9138.44	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=14.709;DP=1169;FS=17.505;HRun=0;HaplotypeScore=222.4569;InbreedingCoeff=0.9943;MQ=55.66;MQ0=12;MQRankSum=-10.876;QD=31.95;ReadPosRankSum=-2.186;VQSLOD=3.5418;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:47:96.11:0,96,1574	0/0:15,0:15:42.10:0,42,533	0/0:62,0:47:94.91:0,95,1337	0/0:44,0:31:48.38:0,48,890	0/0:30,0:30:72.24:0,72,970	0/0:30,0:29:84.28:0,84,1132	0/0:36,0:36:99:0,99,1336	0/0:54,0:54:99:0,114,1449	0/0:63,0:63:99:0,152,2362	1/1:10,41:48:99:2248,132,0	1/1:4,18:21:39.57:663,40,0	0/0:64,0:64:99:0,181,2366	0/0:52,0:52:99:0,147,1955	0/0:56,0:56:99:0,162,2147	1/1:13,34:40:96.31:1578,96,0	0/0:61,0:61:99:0,181,2417	0/0:38,0:39:87.43:0,87,1436	0/0:33,0:34:72.62:0,73,1236	1/1:7,12:15:27.09:473,27,0	1/1:9,19:27:57.19:943,57,0	1/1:15,41:49:99:1725,105,0	0/0:38,0:38:99:0,102,1341	1/1:8,14:21:39.13:675,39,0	1/1:16,24:31:52.01:834,52,0	0/0:31,0:31:70.06:0,70,963	0/0:73,0:73:99:0,199,2600	0/0:32,0:32:90.28:0,90,1199	0/0:22,0:22:11.74:0,12,661
chr10	9515852	.	CCA	C	19678.68	PASS	AB=0.609;AC=45;AF=0.804;AN=56;BaseQRankSum=-3.870;DP=1232;FS=0.609;HRun=0;HaplotypeScore=275.7486;InbreedingCoeff=0.3134;MQ=52.58;MQ0=22;MQRankSum=5.193;QD=17.86;ReadPosRankSum=7.850;VQSLOD=4.3829;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:16,0:38:16.53:21,0,17	1/1:2,12:14:29.58:365,30,0	0/0:74,0:33:48.14:0,48,699	0/0:56,0:28:32.93:0,33,466	0/1:6,0:27:14.53:32,0,15	0/1:3,0:26:11.24:20,0,11	0/1:7,0:28:0.12:0,0,0	0/1:15,0:36:25.55:114,0,26	1/1:11,44:54:99:1301,107,0	1/1:15,44:58:99:1560,129,0	1/1:11,30:41:62.41:664,62,0	1/1:28,42:69:99:1814,157,0	1/1:8,37:44:83.84:1000,84,0	1/1:13,43:55:99:1371,114,0	1/1:25,25:51:99:1201,102,0	0/1:17,0:41:3.35:72,0,3	1/1:16,19:34:75.23:913,75,0	0/1:10,0:16:17.41:27,0,17	1/1:24,13:33:29.79:440,30,0	1/1:8,23:31:58.61:651,59,0	1/1:50,54:109:99:2287,196,0	1/1:5,31:34:80.78:956,81,0	1/1:11,25:37:56.31:656,56,0	1/1:26,45:70:99:1559,129,0	1/1:7,0:30:1.53:3,2,0	1/1:8,40:48:99:1393,117,0	1/1:7,21:28:62.99:731,63,0	1/1:8,14:22:45.03:527,45,0
chr10	9515928	.	T	TCCAC	755.71	PASS	AB=0.973;AC=9;AF=0.161;AN=56;BaseQRankSum=7.770;DP=1029;FS=2.531;HRun=0;HaplotypeScore=341.7366;InbreedingCoeff=0.0683;MQ=51.36;MQ0=13;MQRankSum=-3.198;QD=3.00;ReadPosRankSum=-1.589;VQSLOD=1.5101;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:53,0:53:21.36:125,0,21	0/0:9,0:9:21.07:0,21,434	0/0:49,0:27:22.65:0,23,1111	0/0:56,0:37:99:0,102,1776	0/1:32,0:32:24.97:48,0,25	1/1:17,2:17:8.21:118,8,0	0/1:30,0:28:26.25:26,0,137	0/1:38,0:31:83.77:84,0,345	0/0:48,0:47:99:0,120,2339	0/0:30,0:30:79.95:0,80,1547	0/0:28,0:28:41.99:0,42,842	0/0:58,0:56:99:0,146,2948	0/0:46,0:45:99:0,120,2351	0/0:46,0:45:99:0,117,2220	0/0:59,0:60:99:0,102,2609	0/1:35,4:40:99:312,0,133	0/0:46,0:46:99:0,129,2594	0/1:15,0:15:9.52:121,0,10	0/0:20,0:18:50.76:0,51,816	0/0:27,0:26:29.89:0,30,570	0/0:57,0:56:84.03:0,84,1628	0/0:28,0:27:75.22:0,75,1425	0/0:22,0:22:41.98:0,42,811	0/0:55,0:55:99:0,129,2544	0/1:23,0:22:52.17:65,0,52	0/0:40,0:40:99:0,117,2162	0/0:40,0:40:99:0,111,2128	0/0:11,0:11:33.06:0,33,592
chr10	9515932	.	CAT	C	426.29	PASS	AB=0.990;AC=13;AF=0.232;AN=56;BaseQRankSum=6.865;DP=1004;FS=5.540;HRun=0;HaplotypeScore=292.0000;InbreedingCoeff=0.4959;MQ=50.94;MQ0=16;MQRankSum=-4.713;QD=1.65;ReadPosRankSum=-7.227;VQSLOD=0.3551;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:50,0:49:5.46:43,0,5	0/0:9,0:9:24.08:0,24,460	0/0:52,0:25:71.26:0,71,1190	0/0:56,0:34:71.51:0,72,1604	1/1:31,0:31:12.96:97,13,0	1/1:19,0:17:9.35:52,9,0	1/1:29,0:26:5.12:144,5,0	1/1:34,0:27:1.69:191,2,0	0/0:48,0:46:99:0,111,2087	0/0:28,0:28:84.29:0,84,1562	0/0:26,0:27:41.40:0,41,758	0/0:56,0:54:99:0,145,2741	0/0:44,0:43:99:0,117,2204	0/0:46,0:45:99:0,108,1952	0/0:61,0:61:99:0,147,2569	0/1:38,0:38:0.79:1,0,76	0/0:44,0:44:99:0,123,2321	0/1:16,0:15:28.44:30,0,28	0/1:18,1:17:17.42:17,0,651	0/0:26,1:26:22.41:0,22,517	0/0:54,4:57:26.20:0,26,1370	0/0:27,0:26:72.22:0,72,1280	0/0:20,0:20:42.86:0,43,722	0/0:53,0:54:99:0,125,2322	0/1:22,0:21:0.67:1,0,11	0/0:40,0:40:94.83:0,95,1903	0/0:38,0:38:99:0,105,1956	0/0:10,0:10:27.07:0,27,483
chr10	9515936	.	CT	C	3581.07	PASS	AB=0.934;AC=20;AF=0.357;AN=56;BaseQRankSum=5.899;DP=979;FS=5.215;HRun=1;HaplotypeScore=251.5347;InbreedingCoeff=0.6593;MQ=50.82;MQ0=16;MQRankSum=-3.229;QD=9.81;ReadPosRankSum=-5.220;VQSLOD=-0.6855;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,17:46:24.35:238,24,0	0/0:9,0:9:24.05:0,24,347	0/0:51,2:23:45.12:0,45,928	0/0:53,0:30:81.20:0,81,1158	1/1:0,20:28:31.03:382,31,0	1/1:0,10:15:25.67:229,26,0	1/1:2,13:27:55.38:599,55,0	1/1:2,26:24:61.70:839,62,0	0/0:44,0:42:83.33:0,83,895	0/1:31,0:31:36.18:36,0,793	0/1:28,0:28:17.90:18,0,474	0/0:53,2:54:99:0,127,2133	0/0:44,0:43:99:0,117,1784	0/0:42,0:41:99:0,105,1546	0/0:58,1:60:99:0,145,1277	1/1:1,18:37:14.23:459,14,0	0/0:43,0:44:99:0,101,1826	1/1:4,8:18:40.36:378,40,0	0/1:15,3:17:65.28:65,0,402	0/0:23,2:24:2.18:0,2,297	0/1:50,8:57:62.43:62,0,947	0/0:27,0:26:68.85:0,69,1029	0/0:19,0:19:41.15:0,41,396	0/0:56,0:55:71.96:0,72,1165	1/1:1,9:20:29.95:276,30,0	0/0:35,0:35:98.50:0,98,1456	0/0:37,0:37:99:0,105,1630	0/0:10,0:10:30.06:0,30,435
chr10	9515937	.	T	TACAC	10273.31	PASS	AB=1.000;AC=33;AF=0.589;AN=56;BaseQRankSum=10.639;DP=999;FS=0.677;HRun=0;HaplotypeScore=285.0079;InbreedingCoeff=0.8677;MQ=50.52;MQ0=16;MQRankSum=-2.502;QD=17.24;ReadPosRankSum=-1.309;VQSLOD=4.0268;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:49,0:49:0.12:244,0,0	0/0:11,0:11:18.06:0,18,293	0/0:53,0:23:24.42:0,24,275	0/0:53,0:29:22.80:0,23,330	1/1:31,0:31:20.37:240,20,0	1/1:17,0:15:19.25:281,19,0	1/1:31,0:28:27.36:236,27,0	1/1:35,0:27:29.80:320,30,0	1/1:22,0:43:59.96:325,60,0	1/1:22,8:32:58.65:993,59,0	1/1:16,11:28:20.57:322,21,0	0/0:51,0:51:99:0,100,1714	0/0:41,0:42:99:0,99,1566	0/0:39,0:38:62.78:0,63,1290	1/1:21,41:67:79.57:2261,80,0	1/1:39,0:39:46.54:656,47,0	0/0:41,0:44:83.15:0,83,1525	0/1:19,0:18:16.32:221,0,16	1/1:17,1:20:38.36:498,38,0	1/1:17,2:25:17.91:277,18,0	1/1:54,1:59:44.29:438,44,0	0/0:24,0:25:54.16:0,54,814	1/1:9,9:19:29.80:512,30,0	1/1:25,29:54:95.86:2195,96,0	1/1:21,0:20:20.33:254,20,0	0/0:32,1:34:4.89:0,5,1023	0/0:36,0:37:81.24:0,81,1263	0/0:10,0:10:30.06:0,30,465
chr10	9517596	.	A	AT	5701.31	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-14.261;DP=638;FS=2.903;HRun=8;HaplotypeScore=58.8133;InbreedingCoeff=0.9863;MQ=72.09;MQ0=1;MQRankSum=-2.679;QD=26.03;ReadPosRankSum=-0.877;VQSLOD=5.3380;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,20:25:54.16:623,54,0	0/0:10,0:10:30.02:0,30,275	0/0:14,0:14:31.90:0,32,260	0/0:13,0:12:23.99:0,24,213	1/1:5,37:42:99:1216,108,0	1/1:1,14:15:39.11:450,39,0	1/1:4,12:16:30.09:346,30,0	1/1:6,25:31:75.20:853,75,0	0/0:20,0:20:54.03:0,54,494	0/0:24,0:24:60.01:0,60,546	0/0:30,0:30:72.03:0,72,659	0/0:13,0:13:36:0,36,324	0/0:38,0:38:99:0,102,928	0/0:19,0:19:48.01:0,48,439	0/0:33,0:34:92.08:0,92,829	1/1:5,21:26:38.77:700,39,0	0/0:26,0:26:72.04:0,72,658	1/1:3,20:23:50.96:618,51,0	0/0:22,0:22:57.01:0,57,517	0/0:31,0:31:81.02:0,81,736	0/0:11,0:11:21:0,21,192	0/0:17,0:17:48.03:0,48,439	0/0:31,0:31:87.03:0,87,791	0/0:5,0:5:9:0,9,82	1/1:8,31:41:80.90:894,81,0	0/0:21,0:21:51.01:0,51,467	0/0:35,0:35:96.05:0,96,878	0/0:5,0:5:15.01:0,15,137
chr10	9518377	.	T	TACACACACACACACACACAC	21072.13	PASS	AB=1.000;AC=53;AF=0.946;AN=56;BaseQRankSum=-2.302;DP=687;FS=28.839;HRun=0;HaplotypeScore=354.8566;InbreedingCoeff=0.2961;MQ=55.87;MQ0=5;MQRankSum=-3.226;QD=32.02;ReadPosRankSum=2.979;VQSLOD=1.9132;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:33,0:33:11.66:182,12,0	1/1:5,0:9:3.01:221,3,0	0/1:46,0:21:17.78:18,0,311	0/0:26,0:22:20.88:0,21,480	1/1:22,0:21:9.26:311,9,0	1/1:24,0:24:21.02:526,21,0	1/1:21,0:20:9.02:319,9,0	1/1:15,0:14:19.59:429,20,0	1/1:15,11:30:12.04:850,12,0	1/1:38,0:37:68.84:1868,69,0	1/1:27,0:27:11.95:284,12,0	1/1:20,0:19:14.70:913,15,0	1/1:21,10:32:1.70:1227,2,0	1/1:32,0:31:23.85:930,24,0	1/1:19,8:30:23.67:1883,24,0	1/1:26,0:26:21.05:1091,21,0	1/1:23,0:24:30.14:1615,30,0	1/1:8,0:8:14.99:492,15,0	1/1:21,0:20:40.58:1505,41,0	1/1:19,0:18:6.01:113,6,0	1/1:12,0:12:9.48:141,9,0	1/1:32,1:32:15.51:891,16,0	1/1:30,0:30:1.20:431,1,0	1/1:24,0:23:10.04:313,10,0	1/1:24,0:24:12:153,12,0	1/1:34,0:34:92.15:3110,92,0	1/1:13,7:20:15.05:975,15,0	1/1:3,0:3:3.01:281,3,0
chr10	9520717	.	C	CA	2256.21	PASS	AB=0.993;AC=32;AF=0.571;AN=56;BaseQRankSum=-0.837;DP=424;FS=3.758;HRun=4;HaplotypeScore=135.0458;InbreedingCoeff=0.1726;MQ=63.40;MQ0=2;MQRankSum=-1.915;QD=6.54;ReadPosRankSum=-3.522;VQSLOD=-0.7400;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:21:7.87:39,0,8	1/1:9,0:8:9.59:61,10,0	0/0:15,0:12:30.08:0,30,340	0/0:10,0:9:24.05:0,24,262	1/1:14,0:14:0.64:22,1,0	0/0:12,0:11:0.13:0,0,6	1/1:13,0:13:0.06:3,0,0	0/1:21,0:19:1.62:23,0,2	0/0:19,0:19:41.59:0,42,388	1/1:21,2:23:13.30:285,13,0	1/1:11,3:14:15.52:186,16,0	0/1:13,0:13:9.41:30,0,9	0/1:11,0:11:2.64:13,0,3	0/1:20,0:20:58.57:59,0,65	1/1:10,2:12:6.86:98,7,0	0/0:5,0:3:0.05:0,0,1	0/1:17,0:17:0.95:27,0,1	0/0:8,0:7:2.88:0,3,8	1/1:18,4:21:27.94:327,28,0	1/1:16,9:25:36.67:481,37,0	1/1:8,3:11:8.98:102,9,0	0/1:21,0:21:5.14:41,0,5	1/1:16,1:17:23.08:219,23,0	1/1:11,6:17:4.46:285,4,0	0/0:10,0:10:1.72:0,2,4	0/1:13,1:14:11:31,0,11	0/1:20,0:19:24.59:48,0,25	0/1:9,0:9:3.19:33,0,3
chr10	9520718	.	AAAAGAAAGAAAG	A	862.07	PASS	AC=8;AF=0.222;AN=36;BaseQRankSum=0.417;DP=416;FS=2.709;HRun=0;HaplotypeScore=201.4478;InbreedingCoeff=0.6392;MQ=63.36;MQ0=2;MQRankSum=-0.506;QD=10.78;ReadPosRankSum=1.714;VQSLOD=2.8151;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:9,0:8:3.01:0,3,61	./.	./.	0/0:14,0:14:0.89:0,1,2	./.	./.	./.	1/1:10,9:19:15.05:511,15,0	0/0:23,0:23:15.03:0,15,250	0/0:13,0:13:6.02:0,6,88	0/0:13,0:13:12.01:0,12,144	0/0:12,0:12:6.02:0,6,114	0/0:20,0:20:17.95:0,18,184	0/0:11,0:11:12.98:0,13,192	./.	0/0:16,0:16:0.89:0,1,2	0/0:9,0:8:0:0,0,0	1/1:20,0:19:5.96:130,6,0	1/1:25,0:25:13.16:320,13,0	./.	0/0:21,0:21:12.04:0,12,192	1/1:16,0:16:5.73:24,6,0	0/0:17,0:17:4.47:0,4,40	./.	0/0:14,0:14:12.02:0,12,136	0/0:20,0:19:12.01:0,12,183	./.
chr10	9520721	.	AG	A	5154.84	PASS	AB=0.913;AC=49;AF=0.875;AN=56;BaseQRankSum=2.181;DP=398;FS=6.795;HRun=1;HaplotypeScore=111.5165;InbreedingCoeff=0.6848;MQ=59.95;MQ0=2;MQRankSum=-5.130;QD=14.40;ReadPosRankSum=-5.322;VQSLOD=2.2899;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,6:18:30.33:310,30,0	1/1:7,2:8:13.78:113,14,0	0/0:13,0:10:30.10:0,30,422	0/0:9,0:8:23.92:0,24,273	1/1:6,5:11:17.15:99,17,0	1/1:5,4:8:18.39:169,18,0	1/1:0,12:12:5.99:58,6,0	1/1:13,4:15:30.45:244,30,0	0/0:18,0:18:29.41:0,29,363	1/1:14,8:22:53.23:395,53,0	1/1:5,5:10:25.31:158,25,0	1/1:12,2:14:18.68:212,19,0	1/1:14,1:15:25.45:210,25,0	0/1:19,2:21:14.96:212,0,15	1/1:11,5:16:45.83:404,46,0	1/1:4,0:2:6.01:61,6,0	1/1:16,1:17:25.64:227,26,0	1/1:7,1:7:10.95:72,11,0	1/1:10,9:18:49.41:344,49,0	1/1:15,9:24:68.04:490,68,0	1/1:7,2:10:20.51:159,21,0	1/1:16,3:19:27.34:225,27,0	1/1:5,9:14:38.05:271,38,0	1/1:14,3:17:14.35:173,14,0	1/1:0,8:8:5.88:51,6,0	1/1:15,1:16:18.12:241,18,0	1/1:14,3:17:2.43:126,2,0	1/1:9,0:9:15.71:130,16,0
chr10	9520725	.	AG	A	4895.35	PASS	AB=0.917;AC=49;AF=0.875;AN=56;BaseQRankSum=1.890;DP=396;FS=7.083;HRun=1;HaplotypeScore=115.9673;InbreedingCoeff=0.6534;MQ=56.35;MQ0=2;MQRankSum=-4.948;QD=13.64;ReadPosRankSum=-4.444;VQSLOD=2.2682;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:17,1:17:29.95:315,30,0	1/1:9,2:10:17.98:155,18,0	0/0:11,0:8:24.08:0,24,335	0/0:9,0:8:19.81:0,20,247	1/1:9,2:11:15.20:97,15,0	1/1:8,1:8:18.87:170,19,0	1/1:10,1:11:5.99:58,6,0	1/1:15,2:15:30.48:247,30,0	0/0:17,0:17:23.25:0,23,327	1/1:14,8:22:51:377,51,0	1/1:6,5:11:28.05:169,28,0	1/1:15,2:17:16.04:225,16,0	1/1:14,0:14:23.56:191,24,0	0/1:20,2:22:22.73:186,0,23	1/1:15,4:19:54.81:478,55,0	1/1:3,0:1:3.01:34,3,0	1/1:19,0:19:24.45:223,24,0	1/1:8,0:7:9.39:75,9,0	1/1:8,8:15:40.13:266,40,0	1/1:12,9:21:58.83:391,59,0	1/1:5,2:7:14.61:114,15,0	1/1:15,2:17:18.15:140,18,0	1/1:5,9:14:38.28:262,38,0	1/1:14,3:17:15.44:180,15,0	1/1:7,1:8:5.95:54,6,0	1/1:17,1:18:18.78:240,19,0	1/1:18,2:19:1.66:130,2,0	1/1:9,0:9:13.38:120,13,0
chr10	9520729	.	AG	A	4499.81	PASS	AB=0.933;AC=47;AF=0.839;AN=56;BaseQRankSum=2.604;DP=393;FS=3.692;HRun=1;HaplotypeScore=117.2242;InbreedingCoeff=0.4107;MQ=55.34;MQ0=2;MQRankSum=-2.502;QD=12.57;ReadPosRankSum=-2.978;VQSLOD=2.7053;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:16:24.19:271,24,0	1/1:12,1:12:22.56:181,23,0	0/0:11,0:8:23.67:0,24,262	0/0:7,1:7:2.81:0,3,193	1/1:11,0:11:14.61:87,15,0	1/1:8,0:7:18.41:171,18,0	1/1:10,0:10:6:58,6,0	1/1:13,1:12:24.08:205,24,0	0/0:16,0:16:14.37:0,14,276	1/1:14,6:20:46.05:336,46,0	1/1:8,5:13:13.27:141,13,0	1/1:15,2:17:17.03:227,17,0	1/1:17,0:17:28.22:217,28,0	0/1:21,1:22:24.04:165,0,24	1/1:16,3:19:43.16:427,43,0	1/1:3,0:1:3.01:34,3,0	1/1:18,0:18:21.83:210,22,0	0/1:7,0:6:11.78:61,0,12	1/1:9,5:15:14.60:193,15,0	1/1:11,3:20:53.24:313,53,0	1/1:9,2:11:23.75:158,24,0	1/1:15,2:17:17.98:139,18,0	1/1:8,4:14:40.95:273,41,0	0/1:13,1:16:7.28:155,0,7	1/1:8,0:8:5.95:54,6,0	1/1:19,1:20:18.38:240,18,0	1/1:21,1:21:1.07:135,1,0	1/1:5,0:5:2.70:49,3,0
chr10	9521158	.	GAGAT	G	26695.96	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=1.082;DP=702;FS=1.347;HRun=0;HaplotypeScore=132.8676;InbreedingCoeff=0.9686;MQ=82.69;MQ0=4;MQRankSum=-10.277;QD=40.57;ReadPosRankSum=6.813;VQSLOD=5.1551;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,40:43:81.28:1490,81,0	1/1:0,7:7:21.07:386,21,0	0/0:23,0:23:63.19:0,63,1517	0/0:21,0:21:50.69:0,51,1189	1/1:1,29:30:41.73:772,42,0	1/1:3,37:40:93.32:1710,93,0	1/1:2,22:24:45.15:824,45,0	1/1:1,34:35:99:1709,102,0	1/1:0,23:23:60.21:1104,60,0	1/1:5,39:44:99:2121,117,0	1/1:3,18:21:42.14:773,42,0	1/1:3,20:23:42.14:772,42,0	1/1:3,30:32:78.27:1434,78,0	1/1:0,36:36:84.29:1539,84,0	1/1:1,20:21:48.16:883,48,0	1/1:3,17:20:42.14:768,42,0	1/1:0,20:20:39.13:717,39,0	1/1:0,21:20:42.14:773,42,0	1/1:2,14:16:42.12:712,42,0	1/1:1,26:27:69.24:1269,69,0	1/1:3,22:25:33.11:607,33,0	1/1:2,24:26:57.20:1048,57,0	1/1:0,19:19:48.16:880,48,0	1/1:0,24:24:60.21:1104,60,0	1/1:1,21:22:48.16:883,48,0	1/1:0,29:29:87.25:1478,87,0	1/1:0,18:18:42.14:773,42,0	1/1:1,7:8:9.03:166,9,0
chr10	9521973	.	A	ATGTTAGT	17809.28	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-9.092;DP=574;FS=28.247;HRun=0;HaplotypeScore=116.7019;InbreedingCoeff=0.9986;MQ=76.47;MQ0=0;MQRankSum=-16.313;QD=96.79;ReadPosRankSum=0.660;VQSLOD=3.5319;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,14:18:27.09:1096,27,0	0/0:12,0:12:36.12:0,36,1007	0/0:12,0:12:36.12:0,36,984	0/0:17,0:17:48.05:0,48,1201	1/1:4,25:33:78.27:3006,78,0	1/1:2,25:29:63.22:2512,63,0	1/1:3,9:12:36.12:1504,36,0	1/1:10,14:31:87.28:3122,87,0	0/0:24,0:24:72.25:0,72,1978	0/0:20,0:20:54.19:0,54,1496	0/0:26,0:26:75.24:0,75,2005	0/0:20,0:20:57.20:0,57,1564	0/0:8,0:8:24.08:0,24,651	0/0:12,0:12:36.12:0,36,985	0/0:26,0:27:78.20:0,78,1923	1/1:1,13:15:39.13:1631,39,0	0/0:27,0:27:78.27:0,78,2163	1/1:6,8:16:42.14:1677,42,0	0/0:26,0:26:78.27:0,78,2042	0/0:23,0:23:69.22:0,69,1799	0/0:11,0:11:30.10:0,30,821	0/0:20,0:20:60.21:0,60,1633	0/0:24,0:24:66.23:0,66,1844	0/0:15,0:15:42.14:0,42,1154	1/1:3,26:30:78.27:3262,78,0	0/0:21,0:20:63.22:0,63,1705	0/0:38,0:38:99:0,114,2961	0/0:7,0:7:21.04:0,21,468
chr10	9522069	.	A	AT	4099.88	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-7.887;DP=396;FS=6.881;HRun=7;HaplotypeScore=35.2225;InbreedingCoeff=0.9470;MQ=70.41;MQ0=0;MQRankSum=-0.781;QD=28.87;ReadPosRankSum=-2.824;VQSLOD=2.7278;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,12:19:36.11:435,36,0	0/0:9,0:9:27.04:0,27,261	0/0:5,0:5:9.01:0,9,87	0/0:11,0:11:20.97:0,21,185	1/1:5,15:20:51.16:615,51,0	1/1:2,18:20:54.17:652,54,0	1/1:2,6:8:12.04:145,12,0	1/1:3,30:33:90.25:1068,90,0	0/0:13,0:13:36.06:0,36,348	0/0:17,0:17:42.06:0,42,405	0/0:21,0:21:54.08:0,54,521	0/0:11,0:11:30.05:0,30,290	0/0:5,0:5:15.02:0,15,145	0/0:7,0:7:18.02:0,18,174	0/0:8,0:8:18.01:0,18,168	1/1:5,6:11:21.05:244,21,0	0/0:28,0:28:75.09:0,75,717	1/1:1,17:18:42.13:507,42,0	0/0:22,0:22:66.10:0,66,633	0/0:19,0:19:57.06:0,57,539	0/0:7,0:7:18.03:0,18,174	0/0:2,0:2:3:0,3,29	0/0:7,0:7:21.02:0,21,197	0/0:9,0:9:21.03:0,21,203	1/1:2,11:13:36.11:434,36,0	0/0:16,0:16:39.04:0,39,370	0/0:18,0:18:39.04:0,39,370	0/0:18,0:19:44.10:0,44,411
chr10	9523350	.	TTCC	T	5297.83	PASS	AB=0.548;AC=17;AF=0.304;AN=56;BaseQRankSum=12.272;DP=584;FS=2.227;HRun=0;HaplotypeScore=93.9953;InbreedingCoeff=0.9436;MQ=70.69;MQ0=0;MQRankSum=-2.221;QD=30.80;ReadPosRankSum=4.534;VQSLOD=5.2072;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:72.24:0,72,1464	1/1:0,6:6:9.03:125,9,0	0/0:18,0:18:42.14:0,42,816	0/0:26,0:25:44.70:0,45,855	0/0:27,0:27:75.12:0,75,1442	0/0:22,0:23:57.19:0,57,1175	0/0:18,0:18:51.15:0,51,1008	0/0:22,0:22:54.18:0,54,1046	0/0:17,0:17:45.15:0,45,942	0/0:27,0:27:30.07:0,30,1376	0/0:21,0:21:54.17:0,54,1076	1/1:4,20:24:39.13:587,39,0	1/1:2,22:24:51.17:768,51,0	1/1:2,16:18:39.13:587,39,0	0/0:25,0:25:63.21:0,63,1250	0/0:16,0:16:48.16:0,48,1011	1/1:3,22:25:60.20:903,60,0	0/0:18,0:18:45.11:0,45,892	0/0:12,0:12:27.09:0,27,567	0/0:17,0:17:51.16:0,51,1034	0/0:20,0:20:57.19:0,57,1131	1/1:3,14:17:36.12:531,36,0	0/0:22,0:22:63.20:0,63,1258	0/0:23,0:22:57.20:0,57,1201	0/0:32,0:32:84.29:0,84,1721	0/1:4,19:23:0.03:803,0,0	1/1:2,25:27:53.60:812,54,0	1/1:4,4:8:12.04:181,12,0
chr10	9524170	.	T	TGTGAC	6774.90	PASS	AB=1.000;AC=31;AF=0.912;AN=34;BaseQRankSum=-2.253;DP=141;FS=16.574;HRun=0;HaplotypeScore=80.2992;InbreedingCoeff=0.1618;MQ=86.64;MQ0=0;MQRankSum=-4.535;QD=56.93;ReadPosRankSum=4.076;VQSLOD=3.9652;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	1/1:0,8:8:24.08:571,24,0	0/1:11,0:8:21.93:22,0,26	0/0:16,0:10:0.34:0,0,196	1/1:0,9:9:27.09:563,27,0	1/1:0,5:5:9.03:211,9,0	./.	./.	./.	1/1:0,10:10:30.10:931,30,0	1/1:0,3:3:6.02:137,6,0	1/1:0,4:4:3.01:71,3,0	1/1:0,6:6:6.02:138,6,0	./.	./.	./.	./.	./.	./.	1/1:0,15:15:45.15:1026,45,0	./.	1/1:0,14:14:39.13:874,39,0	1/1:0,10:10:30.10:660,30,0	1/1:0,1:1:3.01:71,3,0	1/1:0,9:9:27.09:635,27,0	1/1:0,4:4:6.02:191,6,0	1/1:0,6:6:12.04:325,12,0	1/1:0,4:4:12.04:349,12,0
chr10	9525327	.	A	AT	231.62	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.881;DP=410;FS=3.232;HRun=9;HaplotypeScore=52.4901;InbreedingCoeff=0.9338;MQ=68.97;MQ0=0;MQRankSum=-1.327;QD=23.16;ReadPosRankSum=-0.959;VQSLOD=4.1587;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:68.95:0,69,597	0/0:8,0:8:23.98:0,24,205	0/0:8,0:7:15:0,15,130	0/0:7,0:8:22.81:0,23,187	0/0:19,0:19:50.85:0,51,417	0/0:17,0:17:41.99:0,42,365	0/0:13,0:13:23.96:0,24,204	0/0:20,0:20:41.97:0,42,364	1/1:1,9:10:30.08:326,30,0	0/0:20,0:20:26.73:0,27,392	0/0:9,0:9:23.98:0,24,206	0/0:11,0:10:29.99:0,30,260	0/0:18,0:18:47.99:0,48,417	0/0:11,0:11:29.99:0,30,260	0/0:17,0:17:47.99:0,48,417	0/0:16,0:16:41.98:0,42,362	0/0:15,0:15:41.97:0,42,359	0/0:30,0:30:80.98:0,81,703	0/0:12,0:12:32.74:0,33,286	0/0:18,2:20:20.81:0,21,409	0/0:8,0:8:23.99:0,24,208	0/0:15,0:15:35.97:0,36,311	0/0:12,0:12:26.87:0,27,219	0/0:4,0:4:12:0,12,104	0/0:15,0:15:38.99:0,39,337	0/0:16,0:16:44.98:0,45,390	0/0:14,0:14:35.99:0,36,313	0/0:7,0:7:21:0,21,182
chr10	9525370	.	C	CT	7095.10	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-12.267;DP=483;FS=36.692;HRun=4;HaplotypeScore=43.0114;InbreedingCoeff=0.9927;MQ=78.72;MQ0=0;MQRankSum=-1.052;QD=35.83;ReadPosRankSum=-1.321;VQSLOD=1.9759;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,24:25:66.18:881,66,0	0/0:7,0:7:21.06:0,21,238	0/0:12,0:11:27.08:0,27,305	0/0:17,0:16:35.74:0,36,429	1/1:0,23:22:69.12:899,69,0	1/1:0,21:21:51.17:697,51,0	1/1:1,12:13:33.09:433,33,0	1/1:2,32:34:96.30:1294,96,0	1/1:1,12:13:36.12:492,36,0	0/0:22,0:22:60.16:0,60,673	0/0:6,0:6:12.02:0,12,128	0/0:17,0:17:48.14:0,48,543	0/0:20,0:20:54.14:0,54,603	0/0:14,0:14:36.09:0,36,398	0/0:24,0:24:72.21:0,72,816	1/1:1,20:21:57.19:779,57,0	0/0:16,0:16:48.14:0,48,544	1/1:2,34:36:87.26:1170,87,0	0/0:15,0:15:36.07:0,36,388	0/0:18,0:18:51.15:0,51,577	0/0:13,0:13:39.11:0,39,442	0/0:12,0:11:33.09:0,33,374	0/0:12,0:12:30.08:0,30,340	0/0:9,0:9:27.08:0,27,306	1/1:0,12:12:33.11:451,33,0	0/0:22,0:22:60.17:0,60,680	0/0:23,0:23:69.18:0,69,772	0/0:6,0:6:18.05:0,18,204
chr10	9525559	.	G	GC	1274.31	PASS	AB=0.739;AC=7;AF=0.125;AN=56;BaseQRankSum=11.470;DP=623;FS=32.185;HRun=0;HaplotypeScore=89.0501;InbreedingCoeff=-0.1470;MQ=62.22;MQ0=6;MQRankSum=1.662;QD=7.68;ReadPosRankSum=4.037;VQSLOD=1.6471;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:23,11:34:64.01:275,0,64	0/0:2,0:2:6.02:0,6,84	0/0:20,0:10:29.99:0,30,393	0/0:24,0:12:29.77:0,30,385	0/1:8,6:14:27.94:103,0,28	0/1:15,9:24:76.06:181,0,76	0/1:24,10:34:99:231,0,132	0/0:28,0:28:34.10:0,34,224	0/0:15,0:15:11.71:0,12,89	0/0:18,0:18:51.14:0,51,689	0/0:9,0:9:16.39:0,16,196	0/0:32,0:32:93.31:0,93,1296	0/0:21,0:21:63.20:0,63,862	0/0:27,0:27:81.27:0,81,1130	0/0:30,0:30:90.26:0,90,1221	0/1:14,6:20:57.90:160,0,58	0/0:35,0:35:96.29:0,96,1322	0/1:14,15:29:72.73:384,0,73	0/0:21,0:21:63.20:0,63,860	0/0:11,0:11:24.08:0,24,335	0/0:48,0:48:99:0,138,1861	0/0:17,0:17:48.12:0,48,648	0/0:15,0:15:42.14:0,42,587	0/0:28,0:28:81.67:0,82,1107	0/1:8,3:11:21.03:72,0,21	0/0:21,0:20:60.18:0,60,808	0/0:23,0:23:69.21:0,69,947	0/0:12,0:12:33.11:0,33,459
chr10	9525560	.	T	TCTGC	3541.51	PASS	AB=0.731;AC=13;AF=0.232;AN=56;BaseQRankSum=13.875;DP=629;FS=14.068;HRun=0;HaplotypeScore=121.9275;InbreedingCoeff=0.4427;MQ=61.54;MQ0=6;MQRankSum=3.097;QD=16.78;ReadPosRankSum=3.202;VQSLOD=2.3277;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:34:80.08:591,0,80	0/0:2,0:2:6.02:0,6,122	0/0:19,0:9:27.09:0,27,478	0/0:24,0:12:29.93:0,30,418	1/1:7,0:13:5.59:259,6,0	0/1:15,0:24:60.48:369,0,60	1/1:23,0:33:30.77:694,31,0	0/1:28,0:28:46.95:187,0,47	0/1:1,1:19:29.84:111,0,30	0/0:19,0:19:54.14:0,54,927	0/0:9,0:9:16.60:0,17,239	0/0:34,0:34:96.30:0,96,1790	0/0:22,0:22:63.20:0,63,1265	0/0:27,0:27:81.28:0,81,1561	0/0:30,0:30:90.29:0,90,1758	1/1:14,0:20:20.36:424,20,0	0/0:33,0:33:96.32:0,96,1932	0/1:14,0:29:26.33:710,0,26	0/0:21,0:21:63.20:0,63,1062	0/0:11,0:11:30.02:0,30,515	0/0:48,0:48:99:0,141,2594	0/0:17,0:17:45.15:0,45,892	0/0:15,0:15:42.14:0,42,773	0/0:28,0:28:81.71:0,82,1587	1/1:8,0:11:10.12:197,10,0	0/0:21,0:20:60.19:0,60,1067	0/0:27,0:27:69.23:0,69,1382	0/0:11,0:11:33.11:0,33,653
chr10	9526137	.	TGG	T	7295.72	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-6.798;DP=645;FS=8.319;HRun=9;HaplotypeScore=109.1362;InbreedingCoeff=0.9714;MQ=86.59;MQ0=0;MQRankSum=-1.871;QD=27.43;ReadPosRankSum=4.081;VQSLOD=4.1878;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,47:53:99:1501,129,0	0/0:2,0:6:9.01:0,9,84	0/0:21,0:22:37.82:0,38,592	0/0:23,0:23:39.96:0,40,477	1/1:4,20:24:44.20:522,44,0	1/1:2,24:26:60.17:699,60,0	1/1:4,37:41:96.28:1118,96,0	1/1:3,24:27:72.20:837,72,0	1/1:2,23:25:63.16:733,63,0	0/0:12,0:18:42.05:0,42,412	0/0:9,0:17:24.06:0,24,300	0/0:9,0:30:61.46:0,61,639	0/0:2,0:21:39.06:0,39,377	0/0:7,0:18:27.04:0,27,277	0/0:9,0:27:33.01:0,33,359	1/1:0,28:28:72.21:839,72,0	0/0:7,0:21:39.04:0,39,370	1/1:3,15:18:39.11:454,39,0	0/0:6,0:15:30.03:0,30,301	0/0:5,0:16:38.97:0,39,406	0/0:10,0:20:39.07:0,39,414	0/0:15,0:21:33.08:0,33,422	0/0:9,0:19:15.03:0,15,164	0/0:9,0:33:60.10:0,60,598	1/1:6,18:24:51.14:591,51,0	0/0:12,0:22:42.06:0,42,411	0/0:11,0:28:48.07:0,48,495	0/0:2,0:2:5.99:0,6,67
chr10	9526145	.	GGT	G	1812.90	PASS	AB=0.997;AC=13;AF=0.232;AN=56;BaseQRankSum=5.151;DP=607;FS=9.197;HRun=0;HaplotypeScore=127.3312;InbreedingCoeff=0.4437;MQ=83.32;MQ0=0;MQRankSum=-0.931;QD=6.62;ReadPosRankSum=7.844;VQSLOD=1.9051;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:56,1:57:42.27:410,0,42	0/0:8,0:8:12.02:0,12,130	0/0:18,0:18:38.99:0,39,551	0/0:17,1:18:17.22:0,17,356	0/1:24,0:24:57.67:140,0,58	0/1:26,0:26:5.14:167,0,5	0/1:43,0:43:40.95:301,0,41	0/1:32,0:32:99:121,0,139	1/1:27,0:27:0.75:224,1,0	0/0:17,0:17:38.42:0,38,398	0/0:16,0:16:38.97:0,39,452	0/0:28,0:28:69.10:0,69,738	0/0:22,0:22:48.07:0,48,476	0/0:14,0:14:27.06:0,27,301	0/0:21,0:21:28.85:0,29,323	1/1:28,0:28:64.18:276,64,0	0/0:16,0:16:40.87:0,41,397	1/1:16,0:16:15.14:133,15,0	0/0:17,0:17:39.04:0,39,404	0/0:17,0:17:50.31:0,50,566	0/0:16,0:16:42.08:0,42,484	0/0:15,0:15:36.04:0,36,463	0/0:14,0:14:14.91:0,15,165	0/0:30,0:30:72.11:0,72,743	1/1:19,2:21:23.80:209,24,0	0/0:20,0:20:48.10:0,48,503	0/0:24,0:24:55.99:0,56,581	0/0:2,0:2:6.02:0,6,91
chr10	9526775	.	A	ACT	906.10	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.464;DP=727;FS=7.362;HRun=0;HaplotypeScore=162.3196;InbreedingCoeff=0.8549;MQ=68.40;MQ0=27;MQRankSum=-0.542;QD=29.23;ReadPosRankSum=-2.659;VQSLOD=4.3543;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:45.10:0,45,524	0/0:6,0:6:6:0,6,62	0/0:65,0:18:15.01:0,15,211	0/0:83,0:27:19.46:0,19,293	0/0:26,0:26:54.10:0,54,639	0/0:27,0:26:45.11:0,45,503	0/0:16,0:16:20.94:0,21,251	0/0:28,0:28:60.18:0,60,773	1/1:21,10:31:69.01:1001,69,0	0/0:32,0:32:78.03:0,78,960	0/0:20,0:20:47.16:0,47,559	0/0:26,0:26:46.03:0,46,524	0/0:25,0:25:64.21:0,64,683	0/0:15,0:15:13.40:0,13,210	0/0:27,0:27:55.21:0,55,640	0/0:30,0:30:69.16:0,69,767	0/0:28,0:28:55.48:0,55,599	0/0:13,0:13:30.09:0,30,365	0/0:16,0:16:44.93:0,45,542	0/0:16,0:16:38.86:0,39,467	0/0:11,0:11:18.06:0,18,232	0/0:32,0:32:56.03:0,56,678	0/0:16,0:16:33.07:0,33,406	0/0:20,0:20:22.72:0,23,267	0/0:21,0:21:29.97:0,30,335	0/0:21,0:21:47.53:0,48,516	0/0:33,0:33:65.56:0,66,654	0/0:10,0:10:22.75:0,23,261
chr10	9526784	.	CAGAGAGAG	C	2267.51	PASS	AB=0.812;AC=14;AF=0.250;AN=56;BaseQRankSum=0.719;DP=751;FS=0.000;HRun=0;HaplotypeScore=216.6784;InbreedingCoeff=0.6249;MQ=60.69;MQ0=29;MQRankSum=-5.584;QD=12.67;ReadPosRankSum=0.775;VQSLOD=2.5855;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:18,7:26:12.51:301,13,0	0/0:1,0:7:3.01:0,3,105	0/0:60,0:12:7.81:0,8,90	0/0:79,0:23:14.95:0,15,158	0/1:17,6:25:99:207,0,107	1/1:14,11:28:14.55:447,15,0	1/1:8,8:15:5.99:150,6,0	1/1:24,0:24:3:27,3,0	0/0:33,0:33:26.25:0,26,769	0/0:37,0:36:54.19:0,54,1933	0/0:23,0:25:16.85:0,17,524	0/0:15,0:32:30.10:0,30,1089	0/0:16,0:26:21.07:0,21,729	0/0:7,0:17:14.56:0,15,530	0/0:25,0:30:30.09:0,30,993	1/1:10,13:26:41.83:939,42,0	0/0:13,0:25:33.09:0,33,1087	0/1:11,2:13:16.31:69,0,16	0/0:21,0:22:26.52:0,27,925	0/0:17,0:20:9.50:0,10,282	0/0:12,0:16:3.01:0,3,66	0/0:20,0:30:17.56:0,18,483	0/0:21,0:25:6.67:0,7,253	0/0:16,0:20:18.06:0,18,678	1/1:8,11:20:12.04:300,12,0	0/0:13,0:22:42.14:0,42,1518	0/0:19,0:35:45.15:0,45,1598	0/0:9,0:9:6.02:0,6,222
chr10	9526819	.	A	AGCG	378.44	PASS	AB=0.848;AC=3;AF=0.054;AN=56;BaseQRankSum=6.193;DP=665;FS=0.000;HRun=0;HaplotypeScore=166.3354;InbreedingCoeff=-0.0478;MQ=55.57;MQ0=20;MQRankSum=-5.677;QD=5.18;ReadPosRankSum=3.286;VQSLOD=1.9751;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:32.31:0,32,465	0/0:10,0:10:13.60:0,14,211	0/0:29,0:10:24.11:0,24,318	0/0:53,0:16:32.19:0,32,408	0/0:20,0:20:33.07:0,33,462	0/1:29,0:29:0.14:0,0,622	0/0:25,0:24:33.68:0,34,579	0/0:28,0:27:47.47:0,47,1157	0/1:5,15:29:37.56:452,0,38	0/0:37,0:36:97.47:0,97,1545	0/0:22,0:22:35.89:0,36,501	0/0:31,0:31:47.95:0,48,676	0/0:17,0:17:25.28:0,25,346	0/0:22,0:22:25.91:0,26,421	0/0:24,0:24:29.93:0,30,426	0/0:24,0:24:27.96:0,28,740	0/0:26,0:26:37.25:0,37,480	0/1:14,0:14:3.93:4,0,449	0/0:16,0:16:42.91:0,43,693	0/0:18,0:18:21.75:0,22,411	0/0:20,0:19:21.06:0,21,337	0/0:22,0:21:31.59:0,32,486	0/0:22,0:22:24.05:0,24,385	0/0:20,0:19:13.53:0,14,308	0/0:20,0:20:27.05:0,27,363	0/0:21,0:21:42.42:0,42,659	0/0:33,0:33:48.13:0,48,697	0/0:5,0:3:5.38:0,5,46
chr10	9528168	.	TCAC	T	259.95	PASS	AC=2;AF=0.037;AN=54;BaseQRankSum=6.118;DP=612;FS=3.426;HRun=0;HaplotypeScore=98.8535;InbreedingCoeff=0.7397;MQ=53.59;MQ0=13;MQRankSum=-2.854;QD=15.29;ReadPosRankSum=-0.052;VQSLOD=3.1879;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:27:65.79:0,66,1127	./.	0/0:26,0:18:28.78:0,29,397	0/0:38,0:22:34.37:0,34,480	0/0:7,0:7:15.02:0,15,274	0/0:15,0:15:30.10:0,30,572	0/0:28,0:28:72.14:0,72,1245	0/0:25,0:24:54.06:0,54,718	1/1:2,15:16:24.08:353,24,0	0/0:14,0:12:33.09:0,33,587	0/0:9,0:8:18.05:0,18,341	0/0:52,0:52:83.89:0,84,1385	0/0:39,0:39:56.76:0,57,1091	0/0:33,0:32:34.45:0,34,791	0/0:21,0:21:60.12:0,60,1054	0/0:15,2:17:0.16:0,0,749	0/0:33,0:33:75.13:0,75,1383	0/0:25,0:24:49.01:0,49,990	0/0:14,0:11:26.94:0,27,405	0/0:4,0:4:12.04:0,12,251	0/0:43,0:42:97.43:0,97,1723	0/0:17,0:17:36.05:0,36,606	0/0:8,0:8:18.06:0,18,378	0/0:39,0:39:87.23:0,87,1613	0/0:21,0:20:45.11:0,45,776	0/0:16,0:15:33.04:0,33,514	0/0:14,0:14:26.89:0,27,395	0/0:9,0:9:14.79:0,15,177
chr10	9528199	.	C	CACCATCATCATT	1257.94	PASS	AB=0.886;AC=10;AF=0.179;AN=56;BaseQRankSum=4.374;DP=651;FS=21.865;HRun=0;HaplotypeScore=203.6146;InbreedingCoeff=-0.0041;MQ=55.47;MQ0=4;MQRankSum=-6.454;QD=4.76;ReadPosRankSum=-0.420;VQSLOD=1.2341;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:26:61.27:0,61,1582	0/0:6,0:6:6:0,6,134	0/0:23,0:17:41.06:0,41,982	0/0:21,0:12:21.61:0,22,496	0/0:14,0:14:33.11:0,33,1116	0/0:15,0:15:33.03:0,33,1033	0/0:23,0:23:60.17:0,60,1750	0/0:20,0:20:33.09:0,33,936	1/1:12,1:12:18.06:524,18,0	0/0:20,0:17:51.15:0,51,1634	0/1:12,0:12:28.85:29,0,546	0/1:43,33:83:99:163,0,2439	0/1:22,19:46:99:220,0,1251	0/1:30,1:31:99:194,0,1294	0/0:22,0:21:4.27:0,4,1670	0/0:18,0:18:20.11:0,20,1124	0/1:31,5:37:87.53:88,0,2839	0/0:21,0:21:60.13:0,60,1843	0/1:19,0:16:38.73:39,0,995	0/0:3,0:3:6.02:0,6,220	0/0:59,0:57:40.45:0,40,3921	0/0:22,0:21:30.10:0,30,1461	0/1:9,0:8:6.94:7,0,379	0/0:38,0:36:81.22:0,81,2611	0/0:17,0:17:42.14:0,42,1520	0/1:12,1:12:99:143,0,980	0/0:12,0:12:30.10:0,30,858	0/0:6,0:6:10.24:0,10,182
chr10	9528369	.	TCACCAC	T	1708.35	PASS	AB=0.724;AC=26;AF=0.619;AN=42;BaseQRankSum=-2.166;DP=480;FS=14.059;HRun=0;HaplotypeScore=106.5795;InbreedingCoeff=0.5086;MQ=46.21;MQ0=32;MQRankSum=-5.107;QD=6.89;ReadPosRankSum=-1.170;VQSLOD=1.0332;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:24.08:0,24,560	1/1:4,1:5:3.01:60,3,0	./.	./.	0/0:5,0:5:9.02:0,9,181	0/0:14,0:13:18.05:0,18,419	0/0:14,0:13:18.98:0,19,406	./.	0/1:3,0:17:9.74:26,0,10	./.	1/1:5,3:7:0.47:1,0,0	1/1:24,6:27:28.72:506,29,0	1/1:19,1:18:6.02:95,6,0	1/1:19,10:28:15.05:302,15,0	1/1:15,3:15:3.01:52,3,0	0/1:8,0:9:15.81:16,0,156	1/1:9,7:16:9.03:175,9,0	0/0:3,0:3:3.01:0,3,84	./.	./.	0/0:44,0:42:8.89:0,9,81	1/1:10,5:12:3.01:60,3,0	./.	1/1:34,6:38:2.65:60,3,0	0/0:6,0:6:6.02:0,6,162	1/1:10,4:11:9.01:144,9,0	1/1:11,7:17:12.04:242,12,0	1/1:4,4:7:6.02:121,6,0
chr10	9528895	.	T	TA	12908.93	PASS	AB=1.000;AC=40;AF=0.714;AN=56;BaseQRankSum=-18.093;DP=643;FS=48.937;HRun=3;HaplotypeScore=78.3028;InbreedingCoeff=0.4426;MQ=73.60;MQ0=0;MQRankSum=-2.488;QD=25.11;ReadPosRankSum=0.195;VQSLOD=1.4555;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,21:24:51.04:648,51,0	1/1:3,9:12:27.09:357,27,0	0/0:20,0:20:32.98:0,33,449	0/0:13,0:13:29.91:0,30,306	1/1:2,27:29:78.02:950,78,0	1/1:1,34:35:93.31:1259,93,0	1/1:2,22:24:57.19:772,57,0	1/1:2,28:30:84.25:1106,84,0	0/0:28,0:28:2.43:0,2,45	0/1:24,0:24:27.65:34,0,28	0/1:22,0:22:23.05:23,0,28	1/1:0,24:24:72.24:970,72,0	1/1:0,14:14:30.10:406,30,0	1/1:2,25:27:63.21:852,63,0	0/1:23,0:23:18.72:51,0,19	1/1:0,17:17:51.17:691,51,0	1/1:2,13:15:39.13:528,39,0	1/1:1,19:20:54.18:731,54,0	0/1:18,0:18:9.47:37,0,9	0/1:38,0:38:53.75:54,0,57	0/0:31,0:31:17.49:0,17,81	1/1:1,23:24:57.19:771,57,0	0/0:37,0:37:27.82:0,28,116	0/1:17,0:17:14.94:28,0,15	1/1:1,25:27:66.18:859,66,0	1/1:5,11:16:37.93:483,38,0	1/1:0,28:28:78.26:1055,78,0	1/1:0,6:6:18.06:243,18,0
chr10	9530500	.	CGT	C	1738.11	PASS	AB=0.763;AC=39;AF=0.780;AN=50;BaseQRankSum=0.430;DP=584;FS=1.150;HRun=0;HaplotypeScore=107.1000;InbreedingCoeff=0.3726;MQ=60.07;MQ0=10;MQRankSum=0.615;QD=4.22;ReadPosRankSum=1.558;VQSLOD=2.7679;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:25:2.44:12,2,0	1/1:7,4:11:8.51:74,9,0	./.	./.	1/1:6,1:12:3.01:32,3,0	1/1:15,0:31:22.73:112,23,0	1/1:13,0:21:8.52:42,9,0	./.	0/0:12,0:23:9.02:0,9,102	1/1:14,0:18:11.36:56,11,0	1/1:7,0:10:5.68:28,6,0	1/1:25,5:30:12.03:129,12,0	0/1:13,3:17:12.53:106,0,13	1/1:13,5:20:12.01:129,12,0	1/1:19,0:33:26.81:129,27,0	1/1:11,0:18:11.36:56,11,0	1/1:19,4:24:19.40:158,19,0	1/1:4,0:6:1.81:12,2,0	0/0:13,0:13:5.98:0,6,47	0/0:19,0:18:3:0,3,26	0/0:20,0:20:9.48:0,9,82	0/1:18,10:31:21.62:154,0,22	1/1:14,7:21:11.86:111,12,0	1/1:14,7:21:15.04:161,15,0	1/1:6,0:9:5.68:28,6,0	0/1:22,8:31:13.86:154,0,14	1/1:8,3:11:9.02:97,9,0	1/1:3,6:12:14.54:106,15,0
chr10	9530548	.	T	TAC	3506.04	PASS	AC=14;AF=0.259;AN=54;BaseQRankSum=2.255;DP=576;FS=0.456;HRun=0;HaplotypeScore=114.8559;InbreedingCoeff=0.9852;MQ=54.57;MQ0=19;MQRankSum=1.426;QD=26.36;ReadPosRankSum=-1.390;VQSLOD=4.1823;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:44.16:0,44,549	0/0:8,0:8:15.04:0,15,183	0/0:30,0:6:18.05:0,18,233	0/0:33,0:13:29.28:0,29,371	0/0:20,0:20:39.12:0,39,518	0/0:32,0:32:68.91:0,69,806	0/0:22,0:22:41.96:0,42,544	0/0:30,0:30:75.22:0,75,1019	0/0:21,0:20:12.20:0,12,239	1/1:5,22:27:75.68:1104,76,0	1/1:12,0:12:20.83:256,21,0	0/0:18,0:18:42:0,42,497	0/0:16,0:16:16.89:0,17,418	0/0:16,0:16:29.81:0,30,365	1/1:29,0:28:65.93:775,66,0	0/0:15,0:15:23.78:0,24,287	0/0:18,0:18:42.19:0,42,493	0/0:10,0:10:21.06:0,21,259	1/1:3,1:14:30.09:435,30,0	1/1:0,1:18:23.37:87,23,0	./.	0/0:26,0:26:55.71:0,56,678	1/1:16,0:16:27.04:377,27,0	1/1:17,0:17:36.04:472,36,0	0/0:20,0:19:51.16:0,51,678	0/0:29,0:28:66.40:0,66,893	0/0:14,0:14:33.02:0,33,359	0/0:14,0:14:30.07:0,30,349
chr10	9532050	.	T	TCACACA	1349.66	PASS	AB=0.929;AC=21;AF=0.375;AN=56;BaseQRankSum=-6.987;DP=789;FS=4.281;HRun=0;HaplotypeScore=225.4504;InbreedingCoeff=0.4974;MQ=63.79;MQ0=23;MQRankSum=-3.710;QD=3.32;ReadPosRankSum=-3.291;VQSLOD=2.2207;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:38:2.10:161,2,0	0/1:9,0:9:7.09:7,0,71	0/1:76,0:31:4.94:5,0,109	0/1:87,0:35:40.95:51,0,41	1/1:9,7:25:5.81:64,6,0	1/1:14,0:15:9.54:87,10,0	1/1:11,7:27:0.17:0,0,0	1/1:21,0:21:22.22:204,22,0	1/1:14,0:19:24.06:479,24,0	0/1:20,0:20:17.17:17,0,322	0/0:24,0:24:6.14:0,6,371	0/0:19,0:19:29.92:0,30,351	0/0:28,0:28:36.14:0,36,570	0/0:33,0:33:64.07:0,64,757	0/0:26,0:26:37.89:0,38,773	1/1:7,0:18:12.77:153,13,0	0/0:36,0:36:31.14:0,31,576	0/1:9,0:20:11.88:204,0,12	0/0:14,0:14:16.83:0,17,208	0/0:17,0:17:13.81:0,14,262	0/0:44,0:44:34.14:0,34,701	0/0:31,0:31:62.22:0,62,719	0/0:15,0:15:26.89:0,27,340	0/0:48,0:50:71.32:0,71,1167	1/1:13,12:30:3.01:97,3,0	0/0:16,0:16:39.07:0,39,421	0/0:24,0:24:39.12:0,39,480	0/0:6,0:6:9.03:0,9,108
chr10	9532074	.	ACACT	A	3893.19	PASS	AB=0.996;AC=36;AF=0.643;AN=56;BaseQRankSum=-2.069;DP=828;FS=0.000;HRun=0;HaplotypeScore=201.3936;InbreedingCoeff=-0.4040;MQ=55.93;MQ0=26;MQRankSum=2.816;QD=4.97;ReadPosRankSum=-5.410;VQSLOD=0.9945;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:35,0:35:99:148,0,127	1/1:10,0:10:9.33:45,9,0	0/1:51,0:12:34.77:35,0,122	0/1:73,0:15:68.62:69,0,75	0/1:35,0:35:31.85:148,0,32	0/1:24,0:24:8.72:212,0,9	0/1:29,0:29:8:139,0,8	0/1:32,0:32:99:257,0,230	0/1:21,0:21:2.98:3,0,152	0/1:31,2:33:87.65:403,0,88	0/1:23,0:23:72.11:72,0,335	1/1:20,1:21:30.08:176,30,0	1/1:27,0:27:49.26:219,49,0	1/1:30,1:31:30.83:248,31,0	0/1:29,0:29:37.06:37,0,551	0/1:18,0:18:12.55:13,0,91	1/1:37,0:36:10.50:176,11,0	0/1:25,0:25:99:140,0,168	0/1:19,0:19:99:118,0,184	0/1:22,0:22:99:178,0,125	0/1:44,0:43:99:175,0,592	1/1:36,1:37:3.56:201,4,0	0/1:16,0:16:47.69:48,0,234	0/0:45,0:45:7.93:0,8,880	0/1:30,0:29:16.13:105,0,16	1/1:24,1:25:39.27:373,39,0	1/1:26,1:27:3.80:119,4,0	1/1:8,0:8:8.34:38,8,0
chr10	9532076	.	ACT	A	9292.52	PASS	AB=0.991;AC=46;AF=0.821;AN=56;BaseQRankSum=-12.217;DP=823;FS=4.890;HRun=0;HaplotypeScore=162.8836;InbreedingCoeff=-0.2238;MQ=56.21;MQ0=23;MQRankSum=2.556;QD=11.29;ReadPosRankSum=-6.328;VQSLOD=2.6126;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:34,0:34:19.46:227,19,0	1/1:1,10:11:11.99:155,12,0	0/1:48,0:11:41.76:42,0,87	0/1:70,0:13:34.18:69,0,34	1/1:34,0:34:11.70:164,12,0	1/1:24,0:24:26.13:283,26,0	1/1:29,0:29:17.44:203,17,0	0/1:32,0:32:17.47:370,0,17	0/1:21,0:21:10.33:10,0,28	1/1:30,4:34:63.64:607,64,0	0/1:23,0:23:69.54:102,0,70	1/1:1,21:22:32.67:443,33,0	1/1:2,25:27:54.11:791,54,0	1/1:4,27:31:43.21:941,43,0	0/1:30,0:30:76.04:121,0,76	1/1:19,0:19:8.51:75,9,0	1/1:7,30:37:39.29:774,39,0	1/1:23,1:24:25.17:250,25,0	0/1:17,1:18:38.23:177,0,38	1/1:21,2:23:0.99:300,1,0	0/1:44,2:45:85.69:398,0,86	1/1:4,32:36:41.22:930,41,0	0/1:16,0:16:22.71:111,0,23	0/1:44,0:44:99:128,0,136	1/1:31,0:30:12.69:140,13,0	1/1:5,20:25:69.16:789,69,0	1/1:4,22:26:32.63:553,33,0	1/1:0,8:8:9.03:137,9,0
chr10	9532078	.	T	TCA	8218.83	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-1.074;DP=812;FS=0.996;HRun=0;HaplotypeScore=169.0711;InbreedingCoeff=0.4724;MQ=57.94;MQ0=20;MQRankSum=1.207;QD=11.71;ReadPosRankSum=2.320;VQSLOD=4.8646;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:33,0:33:6.47:93,6,0	1/1:10,0:10:8.89:60,9,0	0/0:44,0:10:4.16:0,4,43	0/0:65,0:14:2.98:0,3,23	1/1:36,0:36:2.39:65,2,0	1/1:24,0:24:5.49:33,5,0	1/1:27,0:27:7.07:37,7,0	1/1:32,0:32:7.71:37,8,0	1/1:2,18:21:18.06:263,18,0	1/1:35,0:35:79.19:989,79,0	1/1:23,0:23:37.65:305,38,0	1/1:23,0:23:32.60:222,33,0	1/1:28,0:28:50.46:354,50,0	1/1:31,0:31:28.54:364,29,0	1/1:29,0:29:58.85:568,59,0	1/1:19,0:19:14.99:145,15,0	1/1:32,2:33:51.66:385,52,0	1/1:24,0:24:6.64:158,7,0	1/1:18,0:18:44.59:411,45,0	1/1:24,0:24:55.97:640,56,0	1/1:46,1:46:54.93:877,55,0	1/1:36,0:36:48.53:409,49,0	1/1:16,0:16:41.15:381,41,0	1/1:42,0:42:14.86:441,15,0	1/1:31,0:30:2.47:26,2,0	1/1:25,0:25:62.11:629,62,0	1/1:26,0:26:39.66:264,40,0	1/1:8,0:8:8.92:63,9,0
chr10	9532563	.	AT	A	4376.12	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=2.616;DP=612;FS=3.018;HRun=8;HaplotypeScore=91.9695;InbreedingCoeff=0.9168;MQ=71.87;MQ0=2;MQRankSum=-2.134;QD=22.56;ReadPosRankSum=2.974;VQSLOD=5.2650;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:81.25:0,81,978	1/1:1,15:16:45.07:435,45,0	0/0:27,2:22:7.68:0,8,267	0/1:28,0:18:6.94:7,0,181	0/0:22,0:22:63.19:0,63,761	0/0:16,0:16:42.13:0,42,507	0/0:18,0:18:42.13:0,42,507	0/0:42,0:42:99:0,108,1293	0/0:5,0:27:66.32:0,66,353	0/0:30,0:30:78.24:0,78,942	0/0:24,0:24:66.16:0,66,781	1/1:1,23:24:69.11:666,69,0	1/1:1,22:23:69.11:666,69,0	1/1:2,12:14:39.06:376,39,0	0/0:28,0:28:75.23:0,75,906	0/0:31,0:31:87.74:0,88,1048	1/1:3,18:21:53.68:520,54,0	0/0:16,0:16:48.15:0,48,580	0/0:15,0:15:39.09:0,39,457	0/0:26,0:26:75.23:0,75,906	0/0:5,0:5:12.04:0,12,145	1/1:2,13:15:42.07:405,42,0	0/0:19,0:19:51.16:0,51,616	0/0:24,0:24:63.19:0,63,760	0/0:16,0:16:45.13:0,45,534	1/1:1,20:21:60.09:578,60,0	1/1:2,20:22:54.09:521,54,0	1/1:2,7:9:21.03:202,21,0
chr10	9532634	.	G	GA	16024.02	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-6.825;DP=605;FS=38.619;HRun=8;HaplotypeScore=67.4018;InbreedingCoeff=0.9821;MQ=70.13;MQ0=0;MQRankSum=-2.962;QD=27.68;ReadPosRankSum=5.309;VQSLOD=2.7667;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,19:20:45.13:519,45,0	1/1:6,5:11:23.81:254,24,0	0/0:15,0:14:36.02:0,36,327	0/0:11,0:10:29.91:0,30,259	1/1:3,41:44:99:1319,117,0	1/1:3,20:23:54.16:623,54,0	1/1:0,12:12:36.11:415,36,0	1/1:4,25:29:75.19:844,75,0	1/1:1,23:24:69.21:796,69,0	1/1:2,20:22:60.13:668,60,0	1/1:2,21:23:32.71:625,33,0	1/1:4,22:27:66.03:741,66,0	1/1:4,22:26:66.18:751,66,0	1/1:5,15:20:30.02:329,30,0	1/1:2,24:26:72.13:810,72,0	1/1:1,23:24:51.15:589,51,0	1/1:1,13:14:39.07:435,39,0	1/1:2,13:15:30.09:346,30,0	1/1:6,22:28:46.42:726,46,0	1/1:2,24:26:63.10:692,63,0	1/1:1,6:7:12.04:138,12,0	1/1:3,23:26:63.57:705,64,0	1/1:2,22:24:63.66:728,64,0	1/1:4,20:24:54.16:623,54,0	1/1:2,15:17:42.12:485,42,0	1/1:9,17:26:44.74:769,45,0	1/1:5,17:22:54.14:611,54,0	1/1:1,18:19:42.12:481,42,0
chr10	9533413	.	AGT	A	25841.21	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=10.233;DP=675;FS=0.000;HRun=0;HaplotypeScore=194.7240;InbreedingCoeff=0.9995;MQ=73.59;MQ0=0;MQRankSum=-11.942;QD=42.02;ReadPosRankSum=7.414;VQSLOD=4.5881;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,49:49:99:2081,138,0	1/1:0,15:15:45.15:662,45,0	0/0:31,0:31:84.28:0,84,1566	0/0:29,0:29:80.64:0,81,1417	1/1:0,18:18:48.16:722,48,0	1/1:0,17:17:48.16:734,48,0	1/1:1,26:27:72.24:1090,72,0	1/1:2,29:31:87.20:1256,87,0	1/1:1,26:27:75.25:1146,75,0	1/1:0,19:19:57.18:850,57,0	1/1:0,12:12:30.10:450,30,0	1/1:0,28:28:81.28:1239,81,0	1/1:1,28:29:78.26:1183,78,0	1/1:0,30:30:84.28:1274,84,0	1/1:0,31:31:87.30:1330,87,0	1/1:0,30:30:90.31:1376,90,0	1/1:0,21:21:54.14:799,54,0	1/1:0,14:14:39.13:585,39,0	1/1:2,14:16:39.11:570,39,0	1/1:0,22:22:66.22:1000,66,0	1/1:0,18:18:48.16:725,48,0	1/1:1,17:18:51.17:770,51,0	1/1:0,34:34:90.17:1366,90,0	1/1:0,28:28:72.24:1101,72,0	1/1:0,16:16:45.15:688,45,0	1/1:0,27:27:81.25:1213,81,0	1/1:0,27:27:75.25:1135,75,0	1/1:0,11:11:33.11:495,33,0
chr10	9533633	.	A	AG	11012.63	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-18.080;DP=801;FS=1.225;HRun=1;HaplotypeScore=73.2748;InbreedingCoeff=0.9998;MQ=89.73;MQ0=0;MQRankSum=-2.012;QD=40.19;ReadPosRankSum=0.230;VQSLOD=5.3064;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,41:42:99:1799,120,0	0/0:23,0:23:69.22:0,69,896	0/0:29,0:30:66.13:0,66,959	0/0:33,0:33:87.01:0,87,1051	1/1:1,22:23:63.21:944,63,0	1/1:0,25:25:54.18:809,54,0	1/1:0,41:41:99:1484,99,0	1/1:2,24:26:72.24:1078,72,0	1/1:1,26:27:75.25:1122,75,0	0/0:26,0:26:72.23:0,72,935	0/0:22,0:22:66.21:0,66,856	0/0:30,0:30:90.29:0,90,1168	0/0:35,0:35:99:0,105,1348	0/0:27,0:27:81.26:0,81,1052	0/0:32,0:32:96.31:0,96,1247	1/1:1,37:38:99:1573,105,0	0/0:29,0:29:84.27:0,84,1091	1/1:1,18:19:51.17:764,51,0	0/0:25,0:25:69.21:0,69,883	0/0:24,0:24:72.23:0,72,935	0/0:44,0:44:99:0,129,1645	0/0:32,0:32:93.26:0,93,1164	0/0:26,0:26:66.21:0,66,857	0/0:24,0:24:69.22:0,69,895	1/1:0,33:33:96.33:1439,96,0	0/0:27,0:27:78.25:0,78,1013	0/0:29,0:29:84.27:0,84,1090	0/0:9,0:9:27.09:0,27,351
chr10	9534366	.	A	AT	5735.72	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-14.466;DP=660;FS=0.332;HRun=8;HaplotypeScore=57.2899;InbreedingCoeff=0.9962;MQ=76.41;MQ0=0;MQRankSum=-0.337;QD=26.31;ReadPosRankSum=3.550;VQSLOD=5.4358;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,108,982	1/1:1,11:12:33.10:381,33,0	0/0:16,0:16:30:0,30,275	0/0:10,0:10:17.96:0,18,157	0/0:33,0:33:87.04:0,87,796	0/0:20,0:20:54.03:0,54,494	0/0:18,0:18:54.03:0,54,494	0/0:37,0:36:93.01:0,93,843	1/1:4,26:30:72.21:831,72,0	0/0:29,0:30:71.05:0,71,633	0/0:16,0:16:39.02:0,39,357	1/1:7,22:30:51.13:576,51,0	1/1:2,20:22:54.16:623,54,0	1/1:2,19:21:48.14:554,48,0	0/0:26,0:26:78.04:0,78,714	0/0:20,0:21:50.03:0,50,440	1/1:6,15:23:50.82:548,51,0	0/0:27,0:27:72.04:0,72,659	0/0:17,0:17:45.02:0,45,412	0/0:37,0:38:99:0,107,967	0/0:18,0:20:55.09:0,55,474	1/1:3,15:19:47.93:519,48,0	0/0:28,0:28:75.04:0,75,686	0/0:11,0:11:30.01:0,30,275	0/0:32,0:32:75.01:0,75,686	1/1:3,23:26:69.21:796,69,0	1/1:1,26:27:41.74:734,42,0	1/1:3,5:8:15.04:173,15,0
chr10	9535502	.	T	TTGGGGA	46484.28	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=4.829;DP=588;FS=3.933;HRun=0;HaplotypeScore=178.0877;InbreedingCoeff=0.9934;MQ=77.96;MQ0=0;MQRankSum=-10.487;QD=85.61;ReadPosRankSum=6.671;VQSLOD=5.7570;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,22:35:75.26:2530,75,0	1/1:1,12:13:36.12:1293,36,0	0/0:20,0:20:57.20:0,57,1295	0/0:25,0:25:63.15:0,63,1423	1/1:5,19:25:51.17:1743,51,0	1/1:1,14:18:42.14:1509,42,0	1/1:4,12:17:45.15:1466,45,0	1/1:6,10:19:54.17:1688,54,0	1/1:6,16:22:60.21:2013,60,0	1/1:4,13:18:48.16:1666,48,0	1/1:4,14:19:45.15:1583,45,0	1/1:3,19:24:63.22:2166,63,0	1/1:5,18:25:66.23:2282,66,0	1/1:3,27:32:87.30:3057,87,0	1/1:2,24:27:78.27:2763,78,0	1/1:3,14:17:48.16:1726,48,0	1/1:4,8:12:24.08:863,24,0	1/1:7,9:16:39.09:1241,39,0	1/1:9,14:23:66.23:2314,66,0	1/1:2,18:24:57.15:1957,57,0	1/1:5,7:16:18.06:647,18,0	1/1:3,14:18:45.15:1616,45,0	1/1:2,9:13:30.10:1059,30,0	1/1:6,11:20:26.90:913,27,0	1/1:2,15:17:51.13:1742,51,0	1/1:6,20:28:72.25:2365,72,0	1/1:6,28:36:93.32:3312,93,0	1/1:0,9:9:27.09:971,27,0
chr10	9535564	.	AG	A	796.64	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.309;DP=581;FS=1.688;HRun=2;HaplotypeScore=131.3124;InbreedingCoeff=0.9928;MQ=73.16;MQ0=0;MQRankSum=-2.318;QD=31.87;ReadPosRankSum=-0.629;VQSLOD=3.1612;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,120,1769	0/0:11,0:11:27.09:0,27,404	0/0:16,0:16:45.15:0,45,637	0/0:11,0:11:22.64:0,23,381	0/0:16,0:16:36.08:0,36,539	0/0:15,0:15:36.12:0,36,539	0/0:19,0:19:39.13:0,39,584	0/0:32,0:32:93.31:0,93,1375	1/1:2,23:25:69.22:892,69,0	0/0:18,0:18:54.18:0,54,808	0/0:14,0:14:33.11:0,33,494	0/0:25,0:25:72.23:0,72,1051	0/0:17,0:17:51.17:0,51,763	0/0:24,0:24:69.23:0,69,1025	0/0:30,0:30:87.29:0,87,1302	0/0:17,0:17:48.16:0,48,719	0/0:22,0:22:60.16:0,60,872	0/0:11,0:11:33.08:0,33,470	0/0:29,0:29:87.26:0,87,1254	0/0:26,0:26:72.24:0,72,1078	0/0:16,0:16:42.14:0,42,629	0/0:15,0:15:33.11:0,33,494	0/0:22,0:22:48.16:0,48,719	0/0:15,0:15:33.11:0,33,494	0/0:17,0:17:48.16:0,48,718	0/0:36,0:36:99:0,102,1514	0/0:29,0:28:81.27:0,81,1212	0/0:8,0:8:24.08:0,24,359
chr10	9538510	.	TAC	T	2982.40	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-0.180;DP=476;FS=30.009;HRun=0;HaplotypeScore=105.2168;InbreedingCoeff=0.8551;MQ=70.37;MQ0=9;MQRankSum=-2.431;QD=10.85;ReadPosRankSum=2.986;VQSLOD=1.7265;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:14:18.80:141,19,0	1/1:4,0:4:8.91:63,9,0	0/0:31,0:23:55.92:0,56,574	0/0:23,0:16:34.47:0,34,284	1/1:12,0:12:8.98:73,9,0	1/1:19,0:17:24.53:182,25,0	1/1:17,1:17:20.60:144,21,0	1/1:6,0:33:62.66:471,63,0	0/0:13,0:13:8.91:0,9,76	0/0:32,0:31:86.07:0,86,711	0/0:16,0:16:23.81:0,24,181	1/1:15,0:15:35.89:289,36,0	1/1:16,0:16:3.77:25,4,0	1/1:2,16:18:3.01:41,3,0	0/0:16,0:16:23.94:0,24,326	1/1:9,0:9:18.74:135,19,0	1/1:1,16:16:3.01:41,3,0	1/1:15,0:15:41.64:298,42,0	0/0:17,0:13:27.59:0,28,209	0/0:6,0:6:3:0,3,25	0/0:8,0:6:5.99:0,6,49	1/1:26,1:26:35.96:299,36,0	0/0:18,0:17:23.68:0,24,166	0/0:21,0:21:35.74:0,36,271	1/1:11,0:11:11.88:85,12,0	1/1:18,0:18:29.38:355,29,0	1/1:15,2:17:41.88:343,42,0	1/1:11,0:11:26.86:208,27,0
chr10	9538514	.	CACAG	C	2950.70	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=-0.155;DP=449;FS=26.361;HRun=0;HaplotypeScore=114.3364;InbreedingCoeff=0.8625;MQ=66.92;MQ0=9;MQRankSum=-2.325;QD=12.29;ReadPosRankSum=3.336;VQSLOD=1.4381;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:15:19.88:147,20,0	1/1:4,0:4:8.91:63,9,0	0/0:29,0:21:55.92:0,56,573	0/0:21,0:14:34.47:0,34,284	1/1:10,0:10:8.98:73,9,0	1/1:18,0:16:23.38:180,23,0	1/1:17,0:16:20.17:144,20,0	1/1:28,0:28:62.66:471,63,0	0/0:13,0:13:8.93:0,9,85	0/0:31,0:30:86.51:0,87,724	0/0:16,0:16:23.81:0,24,181	1/1:14,0:14:35.85:286,36,0	1/1:1,15:16:5.58:55,6,0	0/0:16,0:16:0.89:0,1,2	0/0:16,0:16:21.21:0,21,320	1/1:8,0:8:18.33:133,18,0	1/1:19,0:17:2.98:22,3,0	1/1:15,0:15:41.60:295,42,0	0/0:16,0:12:27.59:0,28,231	0/0:5,0:5:3:0,3,25	0/0:9,0:6:5.99:0,6,49	1/1:24,0:23:35.96:299,36,0	0/0:17,0:16:23.68:0,24,166	0/0:20,0:20:35.77:0,36,271	1/1:9,0:9:11.88:85,12,0	1/1:17,0:17:29.38:355,29,0	1/1:16,0:16:40.92:347,41,0	1/1:9,0:9:26.86:208,27,0
chr10	9538548	.	G	GGA	345.75	PASS	AB=0.895;AC=10;AF=0.208;AN=48;BaseQRankSum=2.656;DP=324;FS=0.916;HRun=0;HaplotypeScore=83.0744;InbreedingCoeff=0.0894;MQ=38.21;MQ0=32;MQRankSum=-1.765;QD=3.20;ReadPosRankSum=-2.213;VQSLOD=1.8798;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:17,1:16:16.53:17,0,54	0/0:3,0:3:9.03:0,9,111	./.	./.	1/1:11,0:8:9.01:109,9,0	0/1:11,6:17:32.03:38,0,32	0/1:11,0:10:16.82:40,0,17	0/1:24,0:24:92.81:93,0,313	0/0:12,0:10:9.03:0,9,107	0/0:21,0:16:48.16:0,48,688	0/0:7,0:7:9.02:0,9,111	0/0:11,0:10:24.06:0,24,317	0/0:8,0:8:5.64:0,6,34	0/0:16,0:14:5.83:0,6,79	0/0:8,0:7:18.06:0,18,255	0/1:8,1:9:26.54:27,0,69	0/0:16,0:14:9.50:0,10,119	0/1:8,2:9:86.51:124,0,87	0/0:7,0:5:15.01:0,15,169	./.	./.	0/0:17,0:15:11.78:0,12,181	0/0:10,0:9:6.02:0,6,86	0/0:19,0:15:23.99:0,24,312	1/1:5,0:5:2.96:35,3,0	0/0:20,0:18:54:0,54,707	0/0:16,0:15:29.26:0,29,412	0/0:6,0:6:18.06:0,18,259
chr10	9538604	.	GGA	G	386.60	PASS	AB=0.884;AC=12;AF=0.300;AN=40;BaseQRankSum=0.789;DP=266;FS=0.000;HRun=0;HaplotypeScore=82.7946;InbreedingCoeff=0.3702;MQ=30.70;MQ0=32;MQRankSum=-0.345;QD=5.09;ReadPosRankSum=0.939;VQSLOD=2.2924;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,0:4:8.99:75,9,0	0/0:5,0:4:4.25:0,4,30	./.	./.	./.	./.	1/1:1,3:3:6.02:81,6,0	0/0:5,0:5:10.98:0,11,77	1/1:3,4:6:2.55:31,3,0	0/0:20,0:17:18.02:0,18,395	0/0:10,0:8:14.77:0,15,151	0/0:14,0:14:28.22:0,28,179	0/0:16,0:15:8.43:0,8,100	0/1:14,2:16:6.61:7,0,188	0/0:13,1:12:24.06:0,24,401	1/1:3,0:3:5.51:51,6,0	0/0:7,1:7:8.24:0,8,67	0/1:7,3:8:2.98:192,0,3	./.	./.	./.	0/0:19,0:19:25.39:0,25,182	0/0:11,0:9:17.53:0,18,152	0/0:11,0:9:8.92:0,9,158	./.	0/1:17,1:18:27.29:27,0,62	0/1:12,1:13:14.26:58,0,14	0/0:3,0:2:4.78:0,5,25
chr10	9538606	.	AAG	A	461.28	PASS	AB=0.830;AC=10;AF=0.238;AN=42;BaseQRankSum=1.626;DP=286;FS=1.983;HRun=0;HaplotypeScore=86.8224;InbreedingCoeff=0.4549;MQ=32.44;MQ0=29;MQRankSum=-4.286;QD=8.87;ReadPosRankSum=3.043;VQSLOD=3.4405;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:8:8.66:0,9,62	1/1:5,0:4:7.09:51,7,0	./.	./.	./.	./.	1/1:4,0:4:2.06:7,2,0	0/0:5,0:5:5.95:0,6,42	0/0:8,0:7:5.01:0,5,28	0/0:20,1:18:0.79:0,1,269	0/0:11,0:9:9.23:0,9,40	0/0:15,0:15:24.98:0,25,120	0/0:16,0:15:17.65:0,18,96	0/0:16,0:16:14.50:0,15,113	0/0:15,0:13:26.12:0,26,162	0/0:6,0:6:10.80:0,11,109	0/1:5,3:7:4.76:85,0,5	0/0:12,0:10:7.47:0,7,82	./.	0/0:1,0:1:3.01:0,3,42	./.	0/0:21,0:21:17.62:0,18,127	0/0:12,0:10:8.67:0,9,37	0/0:10,0:9:8.34:0,8,40	./.	1/1:10,8:18:18.46:205,18,0	0/1:13,1:14:16.65:203,0,17	1/1:2,1:2:4.83:40,5,0
chr10	9538626	.	GGGAGAGAGA	G	1887.94	PASS	AB=0.929;AC=12;AF=0.214;AN=56;BaseQRankSum=9.461;DP=437;FS=0.000;HRun=0;HaplotypeScore=141.4757;InbreedingCoeff=0.2732;MQ=47.41;MQ0=21;MQRankSum=-6.584;QD=13.11;ReadPosRankSum=5.844;VQSLOD=2.2074;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:17.45:0,17,246	0/1:4,3:6:5.13:104,0,5	0/0:24,0:5:8.67:0,9,121	0/0:38,0:5:6.49:0,6,85	0/0:17,0:15:35.69:0,36,449	0/0:13,0:13:26.50:0,26,330	0/0:7,0:7:15.87:0,16,243	0/0:19,0:19:46.74:0,47,410	0/0:7,0:7:0.87:0,1,59	0/0:27,0:26:68.89:0,69,1361	0/0:17,0:15:12.04:0,12,343	0/1:19,0:19:44.92:280,0,45	1/1:17,0:17:2.34:178,2,0	0/1:17,0:17:32.43:163,0,32	0/0:21,0:20:51.58:0,52,1060	0/0:7,0:7:12.04:0,12,262	0/1:12,2:14:49.66:146,0,50	0/0:11,0:11:32.71:0,33,541	0/0:8,0:6:14:0,14,69	0/0:9,0:9:23.88:0,24,412	0/0:4,0:3:2.84:0,3,14	0/1:25,0:25:28.19:141,0,28	0/0:17,0:16:11.79:0,12,340	0/0:17,0:17:8.18:0,8,259	0/0:11,0:11:26.12:0,26,273	1/1:16,3:18:7.48:382,7,0	1/1:10,8:18:26.74:600,27,0	0/1:8,0:8:3.62:48,0,4
chr10	9538627	.	GGA	G	1687.68	PASS	AB=0.974;AC=28;AF=0.519;AN=54;BaseQRankSum=-0.021;DP=438;FS=16.947;HRun=0;HaplotypeScore=107.6838;InbreedingCoeff=0.5523;MQ=47.50;MQ0=21;MQRankSum=-1.102;QD=6.57;ReadPosRankSum=3.550;VQSLOD=1.6952;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:8.66:0,9,62	0/0:8,0:7:4.67:0,5,28	0/0:25,0:6:7.87:0,8,86	0/0:38,0:4:0.15:0,0,15	0/0:17,0:15:5.45:0,5,25	1/1:13,0:13:3.06:11,3,0	0/1:7,0:7:2.84:3,0,17	0/0:20,0:20:11.12:0,11,77	0/0:7,0:7:5.20:0,5,28	1/1:11,17:26:45.12:531,45,0	1/1:5,12:15:12.04:146,12,0	1/1:7,0:19:23.09:107,23,0	1/1:8,0:17:8.15:61,8,0	1/1:5,0:17:11.83:57,12,0	1/1:14,7:20:44.87:542,45,0	0/0:7,0:7:10.80:0,11,112	1/1:14,0:14:2.63:12,3,0	0/0:12,0:12:4.57:0,5,69	0/0:8,0:6:0:0,0,0	0/0:9,0:9:4.37:0,4,45	./.	1/1:5,0:23:5.40:30,5,0	1/1:5,12:16:11.60:146,12,0	1/1:3,14:17:8.92:110,9,0	1/1:11,0:11:0.89:2,1,0	1/1:18,0:17:9.48:40,9,0	0/1:17,0:18:5.96:58,0,6	0/0:8,0:8:0.62:0,1,1
chr10	9540828	.	T	TGAGA	1349.34	PASS	AB=0.989;AC=21;AF=0.404;AN=52;BaseQRankSum=3.465;DP=478;FS=9.556;HRun=0;HaplotypeScore=126.1606;InbreedingCoeff=-0.3584;MQ=44.90;MQ0=18;MQRankSum=2.432;QD=3.80;ReadPosRankSum=1.593;VQSLOD=1.5183;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:25:56.44:56,0,93	0/1:5,0:5:0:0,0,0	./.	./.	0/1:27,0:26:43.91:44,0,52	1/1:19,0:17:10.42:116,10,0	0/1:30,0:28:99:163,0,114	0/1:23,0:22:99:109,0,227	0/0:27,0:26:7.86:0,8,273	0/1:14,0:14:38.11:38,0,243	0/1:11,0:11:20.18:47,0,20	0/1:17,4:20:15.36:63,0,15	0/1:18,0:18:53.17:91,0,53	0/1:20,0:20:62.51:159,0,63	0/1:22,0:22:48.20:129,0,48	1/1:23,0:22:10.64:131,11,0	0/1:18,0:17:13.34:197,0,13	0/1:8,0:8:35.40:35,0,90	0/0:10,0:9:5.09:0,5,142	0/0:17,0:17:10.73:0,11,140	0/0:25,0:22:12.03:0,12,158	0/0:18,0:17:10.59:0,11,92	0/1:14,0:13:18.63:34,0,19	0/0:21,0:19:6.36:0,6,88	0/1:19,0:16:3.07:3,0,23	0/1:20,0:18:53.74:54,0,164	0/1:16,0:16:29.75:30,0,115	0/0:5,0:4:3:0,3,27
chr10	9540830	.	T	TGAGAGA	3190.76	PASS	AB=0.989;AC=34;AF=0.680;AN=50;BaseQRankSum=-1.294;DP=479;FS=29.135;HRun=0;HaplotypeScore=134.4053;InbreedingCoeff=0.0201;MQ=44.41;MQ0=18;MQRankSum=0.118;QD=7.82;ReadPosRankSum=0.315;VQSLOD=0.8531;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:25:27.03:132,0,27	1/1:6,0:6:2.83:25,3,0	./.	./.	0/1:29,0:28:6.27:75,0,6	1/1:19,0:17:12.03:210,12,0	0/1:33,0:31:33.10:361,0,33	1/1:19,0:18:12.04:243,12,0	0/0:27,0:27:11.45:0,11,266	0/1:12,0:12:51.47:118,0,51	1/1:9,0:9:3.01:79,3,0	1/1:23,0:21:14.46:168,14,0	1/1:18,0:18:8.99:162,9,0	0/1:20,0:20:5.65:289,0,6	0/1:22,0:22:4.54:232,0,5	1/1:23,0:22:14.85:250,15,0	1/1:18,0:17:18.51:338,19,0	0/1:7,0:8:47.69:76,0,48	1/1:11,0:10:6.01:60,6,0	0/0:17,0:17:8.33:0,8,143	0/1:25,0:22:1.19:1,0,169	0/1:18,0:17:15.19:15,0,54	1/1:14,0:13:3.01:65,3,0	0/0:15,4:20:4.81:0,5,95	1/1:20,0:17:6.02:72,6,0	1/1:15,2:17:12.04:244,12,0	0/1:16,0:16:10.41:127,0,10	./.
chr10	9541103	.	C	CCT	17303.34	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-15.641;DP=674;FS=0.918;HRun=0;HaplotypeScore=77.1569;InbreedingCoeff=0.9705;MQ=69.69;MQ0=0;MQRankSum=-2.638;QD=53.74;ReadPosRankSum=0.233;VQSLOD=5.3832;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,37:37:99:2011,99,0	0/0:16,0:16:45.15:0,45,712	0/0:10,0:11:24:0,24,321	0/0:13,0:13:1.80:0,2,413	1/1:1,20:22:54.10:1014,54,0	1/1:2,24:27:63.22:1274,63,0	1/1:0,25:26:75.26:1514,75,0	1/1:2,28:31:90.29:1752,90,0	1/1:0,26:27:72.25:1434,72,0	0/0:21,0:21:60.20:0,60,979	0/0:9,0:9:27.09:0,27,435	0/0:28,0:28:81.28:0,81,1316	0/0:37,0:36:99:0,108,1681	0/0:34,0:34:99:0,99,1601	0/0:36,0:36:99:0,108,1714	1/1:0,39:39:99:2009,99,0	0/0:23,0:23:66.21:0,66,1051	1/1:0,12:12:30.10:608,30,0	1/1:0,13:13:39.13:780,39,0	1/1:0,22:22:66.18:1276,66,0	1/1:0,35:36:99:2010,99,0	0/0:23,0:23:54.60:0,55,902	0/0:11,0:11:33.11:0,33,537	0/0:27,0:27:78.24:0,78,1246	1/1:1,29:30:81.28:1621,81,0	0/0:31,0:31:93.29:0,93,1433	0/0:21,0:21:60.15:0,60,918	0/0:11,0:11:33.10:0,33,514
chr10	9541199	.	GA	G	2068.72	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=9.160;DP=656;FS=7.162;HRun=9;HaplotypeScore=82.5330;InbreedingCoeff=0.9834;MQ=71.24;MQ0=0;MQRankSum=-1.411;QD=21.11;ReadPosRankSum=0.115;VQSLOD=4.1633;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:75.22:0,75,865	0/0:11,0:11:26.10:0,26,275	0/0:21,0:18:41.75:0,42,432	0/0:24,0:24:47.79:0,48,486	0/0:28,1:29:44.31:0,44,725	0/0:19,0:19:42.12:0,42,484	0/0:30,0:30:87.24:0,87,994	0/0:21,0:21:45.09:0,45,503	1/1:1,20:21:54.03:494,54,0	0/0:29,0:29:72.20:0,72,815	0/0:5,0:5:9.03:0,9,101	0/0:32,0:32:87.21:0,87,976	0/0:28,0:28:72.18:0,72,805	0/0:31,0:31:72.21:0,72,826	0/0:26,0:26:69.17:0,69,774	0/0:24,0:24:63.19:0,63,727	0/0:24,0:24:63.17:0,63,713	0/0:16,0:16:45.13:0,45,516	1/1:1,22:23:63.03:577,63,0	1/1:8,15:23:57.03:521,57,0	1/1:8,23:31:38.81:637,39,0	0/0:29,0:29:60.15:0,60,677	0/0:24,0:24:66.19:0,66,758	0/0:26,0:26:71.95:0,72,808	0/0:23,0:22:60.08:0,60,659	0/0:28,0:28:78.22:0,78,891	0/0:18,0:18:48.14:0,48,553	0/0:11,0:11:30.09:0,30,345
chr10	9541254	.	GACAC	G	671.50	PASS	AB=0.920;AC=20;AF=0.417;AN=48;BaseQRankSum=-1.408;DP=560;FS=2.299;HRun=0;HaplotypeScore=141.2670;InbreedingCoeff=0.4482;MQ=66.46;MQ0=7;MQRankSum=2.223;QD=2.91;ReadPosRankSum=1.547;VQSLOD=2.3731;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	1/1:8,3:11:3.01:46,3,0	./.	./.	0/1:18,0:18:0:0,0,0	0/0:14,0:13:5.87:0,6,35	1/1:26,0:26:0.47:1,0,0	0/1:22,0:25:0:0,0,0	0/0:27,0:27:16.05:0,16,253	0/0:24,0:24:14.22:0,14,192	0/0:12,0:12:11.78:0,12,219	0/1:25,0:25:21.82:121,0,22	1/1:15,5:21:6.02:93,6,0	1/1:17,0:17:9.01:102,9,0	0/0:17,0:17:11.78:0,12,216	0/0:23,0:23:8.77:0,9,51	1/1:14,11:23:15.05:231,15,0	./.	0/0:14,0:14:3.94:0,4,203	0/0:9,0:10:6:0,6,78	0/0:28,0:28:42.05:0,42,654	0/1:16,6:22:14.13:40,0,14	0/0:15,0:15:3.48:0,3,67	0/0:34,1:35:1.76:0,2,838	0/0:21,0:21:0:0,0,0	1/1:13,0:13:3.01:46,3,0	1/1:9,7:16:3.01:47,3,0	1/1:10,0:10:8.99:88,9,0
chr10	9541290	.	C	CAGAGAG	1302.48	PASS	AB=1.000;AC=14;AF=0.250;AN=56;BaseQRankSum=6.513;DP=567;FS=7.456;HRun=0;HaplotypeScore=158.2839;InbreedingCoeff=0.5147;MQ=47.85;MQ0=19;MQRankSum=-5.178;QD=8.98;ReadPosRankSum=-0.016;VQSLOD=2.0354;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:19:8.33:118,8,0	0/0:18,0:18:32.21:0,32,708	0/0:12,0:2:6.02:0,6,121	0/0:20,0:10:22.46:0,22,426	1/1:12,0:12:6.02:121,6,0	1/1:6,7:14:6.02:140,6,0	0/1:16,0:16:23.88:186,0,24	0/1:12,0:11:36.06:256,0,36	0/1:27,0:27:16.57:17,0,424	0/0:26,0:26:72.22:0,72,1564	0/0:18,0:18:39.13:0,39,870	0/0:40,0:40:97.62:0,98,1981	0/0:25,0:24:43.30:0,43,771	0/0:23,0:22:39.28:0,39,775	0/0:16,0:16:36.59:0,37,817	1/1:15,1:20:21.28:459,21,0	0/0:32,0:30:58.04:0,58,1113	0/1:10,0:9:8.38:119,0,8	0/0:21,0:18:47.96:0,48,796	0/0:13,0:13:17.84:0,18,344	0/0:34,0:33:78.23:0,78,1738	0/0:27,0:27:30.09:0,30,629	0/0:9,0:9:15.05:0,15,318	0/0:37,0:37:87.25:0,87,1895	1/1:9,1:10:3.01:54,3,0	0/0:19,0:18:46.21:0,46,811	0/0:21,0:21:39.98:0,40,727	0/0:11,0:11:29.84:0,30,600
chr10	9541298	.	C	CAGAGAGAGAGAGAG	1029.54	PASS	AB=1.000;AC=16;AF=0.286;AN=56;BaseQRankSum=4.567;DP=509;FS=11.465;HRun=0;HaplotypeScore=208.6480;InbreedingCoeff=0.6154;MQ=56.61;MQ0=16;MQRankSum=-5.626;QD=12.71;ReadPosRankSum=-2.003;VQSLOD=1.4121;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:15,0:13:5.92:6,0,17	0/0:14,0:14:22.04:0,22,921	0/0:18,0:9:14.72:0,15,391	0/0:23,0:15:35.07:0,35,1005	1/1:3,0:3:2.99:23,3,0	1/1:9,0:9:6.49:147,6,0	1/1:2,6:11:2.37:8,2,0	1/1:9,0:8:15.05:450,15,0	0/0:28,0:28:33.22:0,33,990	0/0:21,0:21:44.28:0,44,1264	0/0:18,0:18:33.11:0,33,1218	0/0:40,0:40:40.48:0,40,2415	0/0:22,0:21:19.11:0,19,1065	0/0:25,0:24:2.90:0,3,962	0/0:17,0:17:35.73:0,36,1186	1/1:11,0:10:8.41:221,8,0	0/0:30,0:29:37.14:0,37,2003	1/1:9,0:8:3.01:144,3,0	0/0:24,0:21:28.46:0,28,1122	0/0:14,0:14:20.23:0,20,454	0/0:36,0:35:81.15:0,81,2407	0/0:23,0:23:21.73:0,22,868	0/0:6,0:6:3.48:0,3,49	0/0:36,0:36:78.05:0,78,2529	1/1:5,0:5:3.48:126,3,0	0/0:18,0:17:17.78:0,18,1014	0/0:15,0:15:22:0,22,876	0/1:8,0:8:67.35:67,0,488
chr10	9541302	.	C	CAGAGAGAGAGAGAGAGAG	2426.11	PASS	AC=16;AF=0.296;AN=54;BaseQRankSum=2.136;DP=519;FS=3.852;HRun=0;HaplotypeScore=244.2438;InbreedingCoeff=0.8785;MQ=56.20;MQ0=14;MQRankSum=-6.734;QD=24.76;ReadPosRankSum=-1.056;VQSLOD=2.2706;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:11,5:17:8.76:156,9,0	0/0:14,0:14:23.62:0,24,1113	0/0:21,0:11:26.50:0,26,665	0/0:24,0:16:32.52:0,33,1352	1/1:5,0:5:3.01:70,3,0	1/1:12,0:12:12.51:372,13,0	1/1:15,0:14:3.01:57,3,0	1/1:14,0:13:27.09:967,27,0	0/0:27,0:27:30.97:0,31,1214	0/0:14,0:14:36.07:0,36,1361	0/0:18,0:18:33.11:0,33,1356	0/0:37,0:37:48.46:0,48,3081	0/0:21,0:20:33.94:0,34,1438	0/0:23,0:22:42.06:0,42,1421	0/0:18,0:18:32.90:0,33,1285	1/1:12,0:11:12.97:268,13,0	0/0:30,0:30:55.95:0,56,2593	1/1:6,7:12:7.48:537,7,0	0/0:25,0:23:42.07:0,42,1470	0/0:13,0:13:14.99:0,15,537	0/0:33,0:32:60.17:0,60,2437	0/0:25,0:25:26.96:0,27,1140	./.	0/0:34,0:34:66.13:0,66,2765	1/1:8,0:8:6.89:181,7,0	0/0:18,0:17:41.93:0,42,1398	0/0:18,0:18:30.10:0,30,1165	0/0:4,0:4:12.04:0,12,611
chr10	9541613	.	CCACAGCAACAGCAT	C	15835.29	PASS	AB=0.958;AC=17;AF=0.304;AN=56;BaseQRankSum=17.661;DP=817;FS=3.962;HRun=0;HaplotypeScore=320.6076;InbreedingCoeff=0.9087;MQ=92.28;MQ0=0;MQRankSum=-16.392;QD=70.38;ReadPosRankSum=2.517;VQSLOD=4.1887;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,30:31:51.03:1601,51,0	0/0:17,0:17:48.14:0,48,2790	0/0:35,0:35:92.33:0,92,4865	0/0:46,0:46:96.26:0,96,6398	1/1:2,15:17:45.03:1634,45,0	1/1:1,26:27:66.23:2752,66,0	1/1:3,27:30:48.16:1993,48,0	1/1:3,23:26:68.92:1765,69,0	0/1:22,1:23:59.56:60,0,4155	0/0:40,0:40:99:0,111,6934	0/0:10,0:10:30.09:0,30,1734	0/0:38,0:38:99:0,108,6703	0/0:34,0:34:96.33:0,96,6539	0/0:42,0:42:99:0,123,7782	0/0:46,0:46:99:0,129,8130	1/1:0,36:36:81.28:3388,81,0	0/0:28,0:28:81.28:0,81,4893	1/1:2,10:12:11.73:497,12,0	0/0:22,0:22:62.94:0,63,3321	0/0:28,0:28:72.25:0,72,4088	0/0:63,0:63:99:0,181,10531	0/0:26,0:26:72.22:0,72,4444	0/0:20,0:20:57.20:0,57,3573	0/0:34,0:34:99:0,99,6053	1/1:1,22:23:54.10:2145,54,0	0/0:37,0:37:99:0,102,6615	0/0:20,0:19:60.13:0,60,3077	0/0:6,0:6:18.06:0,18,1180
chr10	9542663	.	TG	T	13633.04	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=14.084;DP=659;FS=15.498;HRun=1;HaplotypeScore=63.5630;InbreedingCoeff=0.9611;MQ=86.60;MQ0=0;MQRankSum=-2.541;QD=37.98;ReadPosRankSum=4.188;VQSLOD=3.7172;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,14:14:42.14:587,42,0	1/1:0,10:10:30.10:420,30,0	0/0:24,0:24:72.21:0,72,1073	0/0:21,0:21:60.15:0,60,863	1/1:0,29:29:78.11:1031,78,0	1/1:0,28:28:78.26:1091,78,0	1/1:0,26:26:69.23:965,69,0	1/1:0,25:25:75.24:1033,75,0	0/0:33,0:33:99:0,99,1552	0/0:32,0:32:96.30:0,96,1468	0/0:28,0:28:84.29:0,84,1336	1/1:0,20:20:57.19:797,57,0	1/1:1,27:28:78.26:1082,78,0	1/1:1,18:19:43.85:742,44,0	0/0:27,0:27:81.28:0,81,1293	1/1:1,17:18:3.22:623,3,0	1/1:0,21:21:54.18:755,54,0	1/1:0,16:16:45.15:629,45,0	0/0:23,0:23:69.22:0,69,1060	0/0:31,0:31:93.30:0,93,1461	0/0:28,0:28:84.27:0,84,1315	1/1:0,24:24:57.10:753,57,0	0/0:37,0:37:99:0,108,1699	0/0:16,0:16:48.16:0,48,762	1/1:0,24:24:69.23:965,69,0	1/1:1,24:25:75.23:1031,75,0	1/1:0,27:27:75.25:1046,75,0	1/1:0,5:5:6.02:84,6,0
chr10	9543541	.	ATGTGTGTGTGTGTG	A	2379.54	PASS	AB=0.797;AC=19;AF=0.339;AN=56;BaseQRankSum=-0.127;DP=536;FS=1.564;HRun=0;HaplotypeScore=227.2233;InbreedingCoeff=0.6028;MQ=59.11;MQ0=11;MQRankSum=-3.347;QD=10.53;ReadPosRankSum=-1.179;VQSLOD=1.8261;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:20,13:34:8.39:243,8,0	0/0:5,0:8:15:0,15,220	0/0:15,0:10:3.01:0,3,85	0/0:16,0:12:3.01:0,3,30	1/1:13,11:25:3.01:118,3,0	1/1:10,7:16:9.03:353,9,0	1/1:8,9:19:17.19:420,17,0	1/1:28,0:26:17.90:197,18,0	0/0:10,0:22:17.94:0,18,140	0/0:8,0:16:33.11:0,33,926	0/0:7,0:17:17.20:0,17,452	0/0:8,0:14:6.01:0,6,88	0/0:13,0:27:33.05:0,33,505	0/0:5,0:16:14.86:0,15,248	0/0:11,0:16:21.05:0,21,548	1/1:3,9:12:15.05:578,15,0	0/0:14,0:19:18.02:0,18,257	1/1:18,7:25:1.09:115,1,0	0/1:20,2:20:45.37:91,0,45	0/1:7,1:17:12.94:92,0,13	0/0:31,0:27:10.95:0,11,71	0/0:6,0:12:11.75:0,12,162	0/0:15,0:18:24.08:0,24,675	0/0:9,0:16:14.91:0,15,336	1/1:6,8:14:9.03:353,9,0	0/0:15,0:21:30.06:0,30,443	0/0:12,0:22:24.05:0,24,389	0/1:9,0:11:2.53:3,0,206
chr10	9543793	.	GTCTA	G	5432.43	PASS	AB=1.000;AC=37;AF=0.712;AN=52;BaseQRankSum=2.378;DP=588;FS=12.266;HRun=0;HaplotypeScore=142.2176;InbreedingCoeff=0.7648;MQ=63.10;MQ0=1;MQRankSum=-0.407;QD=14.00;ReadPosRankSum=-0.738;VQSLOD=3.7607;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:24:27.09:355,27,0	1/1:9,0:9:2.98:37,3,0	./.	./.	0/0:29,0:29:44.83:0,45,973	0/0:18,0:18:33.11:0,33,735	0/0:22,0:22:9.03:0,9,206	0/0:42,0:42:4.26:0,4,39	1/1:13,12:25:24.08:368,24,0	1/1:11,9:20:27.07:371,27,0	1/1:15,7:22:21.07:309,21,0	1/1:21,0:21:21.07:269,21,0	1/1:19,0:19:15.05:197,15,0	1/1:20,0:20:12.04:156,12,0	1/1:13,9:22:27.09:414,27,0	0/0:26,0:26:54.18:0,54,920	1/1:9,0:9:5.94:84,6,0	0/0:20,0:20:36.12:0,36,834	1/1:16,0:16:3.01:46,3,0	1/1:12,17:29:48.16:735,48,0	1/1:10,10:20:27.09:414,27,0	1/1:20,0:20:9.03:105,9,0	1/1:16,11:27:39.09:571,39,0	1/1:9,6:15:12.04:184,12,0	0/0:19,0:19:36.12:0,36,806	1/1:28,0:28:13.34:417,13,0	1/1:26,0:26:27.07:339,27,0	0/1:16,0:16:56.13:60,0,56
chr10	9543843	.	CTATT	C	6459.50	PASS	AB=1.000;AC=36;AF=0.643;AN=56;BaseQRankSum=1.838;DP=640;FS=1.093;HRun=0;HaplotypeScore=148.1907;InbreedingCoeff=-0.1555;MQ=69.19;MQ0=4;MQRankSum=-0.614;QD=10.91;ReadPosRankSum=2.797;VQSLOD=4.5266;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,29:30:27.09:555,27,0	1/1:0,11:11:5.56:74,6,0	0/0:21,0:18:32.12:0,32,434	0/0:12,0:11:3.72:0,4,73	0/1:37,0:37:99:198,0,587	0/1:28,0:28:99:249,0,426	0/1:25,0:25:85.38:350,0,85	1/1:33,0:32:18.09:548,18,0	0/1:23,0:23:99:100,0,211	0/1:21,0:21:81.98:82,0,280	0/1:17,0:17:99:111,0,145	1/1:0,25:25:21.07:431,21,0	1/1:0,22:22:14.56:300,15,0	1/1:0,18:18:12.04:232,12,0	0/1:22,0:22:99:127,0,236	0/1:32,0:32:99:208,0,462	1/1:10,2:12:20.44:241,20,0	0/1:28,0:27:99:224,0,505	0/0:14,0:14:21.58:0,22,321	0/1:36,0:36:99:215,0,334	0/1:21,0:21:99:122,0,216	1/1:0,21:21:8.91:168,9,0	0/1:30,0:30:99:158,0,285	0/1:13,0:13:50.06:50,0,144	0/1:23,0:23:99:148,0,471	1/1:0,26:26:68.70:919,69,0	1/1:0,28:28:27:526,27,0	1/1:2,8:9:5.82:124,6,0
chr10	9543846	.	T	TC	147.41	PASS	AB=0.821;AC=2;AF=0.036;AN=56;BaseQRankSum=3.666;DP=640;FS=1.970;HRun=0;HaplotypeScore=143.6924;InbreedingCoeff=-0.0291;MQ=70.80;MQ0=4;MQRankSum=-0.422;QD=3.07;ReadPosRankSum=-0.435;VQSLOD=3.4722;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:21.96:0,22,73	0/0:11,0:11:5.61:0,6,38	0/0:22,0:19:49.57:0,50,705	0/1:13,1:12:3.57:4,0,151	0/0:37,0:37:77.12:0,77,504	0/0:25,0:25:71.12:0,71,486	0/0:24,0:24:67.92:0,68,444	0/0:32,0:31:91.30:0,91,624	0/0:24,0:24:60.05:0,60,676	0/0:22,0:22:59.13:0,59,693	0/0:17,0:17:42.04:0,42,468	0/0:25,0:25:16.91:0,17,57	0/0:22,0:22:11.95:0,12,44	0/0:18,0:18:10.34:0,10,46	0/0:23,0:23:68.99:0,69,787	0/1:20,14:34:99:221,0,264	0/0:13,0:13:19.87:0,20,121	0/0:26,0:25:77.02:0,77,537	0/0:16,0:16:48.15:0,48,641	0/0:36,0:36:99:0,102,1093	0/0:21,0:21:60.05:0,60,676	0/0:21,0:21:7.74:0,8,40	0/0:29,0:29:83.22:0,83,893	0/0:13,0:13:33.04:0,33,389	0/0:23,0:23:58.91:0,59,373	0/0:26,0:26:58.87:0,59,324	0/0:28,0:28:19.62:0,20,68	0/0:9,0:8:4.74:0,5,15
chr10	9543847	.	T	TATC	560.87	PASS	AB=0.862;AC=2;AF=0.036;AN=56;BaseQRankSum=0.508;DP=645;FS=4.897;HRun=0;HaplotypeScore=161.8698;InbreedingCoeff=-0.0499;MQ=72.03;MQ0=3;MQRankSum=0.237;QD=11.93;ReadPosRankSum=-3.693;VQSLOD=2.2230;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:25.98:0,26,137	0/0:11,0:11:5.79:0,6,49	0/0:22,0:20:39.17:0,39,868	0/0:15,0:13:11.15:0,11,232	0/0:37,0:37:53.87:0,54,619	0/0:25,0:25:71.85:0,72,615	0/0:25,0:25:44.31:0,44,456	0/0:33,0:32:31.27:0,31,600	0/0:24,0:24:60.17:0,60,1006	0/0:21,0:21:62.24:0,62,1076	0/0:17,0:17:42.10:0,42,753	0/0:25,0:25:20.21:0,20,107	0/0:22,0:22:14.44:0,14,83	0/0:18,0:18:11.70:0,12,74	0/0:23,0:23:69.11:0,69,1166	0/1:21,13:34:99:632,0,271	0/1:13,0:13:15.15:15,0,111	0/0:26,0:25:77.92:0,78,685	0/0:16,0:16:48.15:0,48,873	0/0:36,0:36:99:0,102,1751	0/0:21,0:21:60.21:0,60,1092	0/0:21,0:21:8.66:0,9,59	0/0:30,0:30:81.11:0,81,1369	0/0:13,0:13:33.11:0,33,584	0/0:23,0:23:59.81:0,60,491	0/0:26,0:26:61.72:0,62,431	0/0:28,0:28:23.10:0,23,125	0/0:8,0:8:5.75:0,6,29
chr10	9544289	.	CTG	C	5441.44	PASS	AB=0.847;AC=31;AF=0.554;AN=56;BaseQRankSum=2.773;DP=675;FS=11.670;HRun=0;HaplotypeScore=162.7232;InbreedingCoeff=0.7429;MQ=58.36;MQ0=8;MQRankSum=-1.372;QD=13.78;ReadPosRankSum=2.954;VQSLOD=4.0997;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:26:38.92:320,39,0	1/1:17,1:18:26.47:279,26,0	0/0:31,0:12:23.99:0,24,300	0/0:23,0:10:23.89:0,24,305	0/1:30,2:32:19.02:172,0,19	1/1:31,3:34:51.41:425,51,0	1/1:21,2:23:30.95:270,31,0	0/1:9,18:27:55.82:501,0,56	0/0:26,0:26:33.09:0,33,512	0/0:35,0:35:70.07:0,70,1012	0/0:19,0:19:12.04:0,12,173	1/1:16,3:18:6.43:285,6,0	1/1:22,1:23:35.87:268,36,0	1/1:19,1:20:29.19:267,29,0	0/0:17,0:17:21.07:0,21,319	1/1:21,3:24:45.60:449,46,0	1/1:36,0:36:34.11:470,34,0	1/1:14,0:13:36.11:453,36,0	0/0:18,0:18:36.12:0,36,580	0/0:32,0:32:55.69:0,56,1200	0/0:22,0:22:45.13:0,45,686	0/1:21,0:21:51.67:199,0,52	0/0:20,0:20:11.49:0,11,165	0/0:37,0:35:24.44:0,24,377	1/1:28,2:30:27.66:335,28,0	1/1:7,10:17:31.08:321,31,0	1/1:20,2:21:38.38:373,38,0	1/1:9,0:9:5.03:54,5,0
chr10	9544298	.	T	TGA	3751.03	PASS	AB=0.941;AC=25;AF=0.446;AN=56;BaseQRankSum=5.751;DP=718;FS=32.102;HRun=0;HaplotypeScore=186.9278;InbreedingCoeff=0.0929;MQ=53.17;MQ0=8;MQRankSum=2.469;QD=8.53;ReadPosRankSum=6.466;VQSLOD=1.7608;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:25,5:30:43:367,0,43	1/1:20,0:20:4.60:78,5,0	0/0:28,0:8:24.07:0,24,325	0/0:23,0:9:24.08:0,24,359	0/1:24,8:32:41.35:300,0,41	1/1:27,8:35:5.01:525,5,0	0/1:17,6:23:28.25:262,0,28	0/1:36,0:36:99:213,0,205	0/0:27,0:27:32.49:0,32,304	0/0:33,0:33:92.60:0,93,1051	0/0:21,0:21:12.01:0,12,158	0/1:19,0:18:58.28:58,0,84	1/1:23,0:23:31.75:136,32,0	0/1:24,0:24:16.70:93,0,17	0/0:19,0:19:24.07:0,24,345	1/1:22,3:25:14.99:273,15,0	1/1:35,0:35:1.19:206,1,0	0/1:18,0:17:16.49:134,0,16	0/1:19,0:19:99:113,0,333	0/0:37,0:37:27.95:0,28,834	0/0:31,0:31:19.84:0,20,500	0/1:25,0:25:42.97:72,0,43	0/0:22,0:22:11.76:0,12,157	0/0:37,0:35:29.27:0,29,368	1/1:18,12:30:22.24:614,22,0	1/1:15,0:15:2.19:159,2,0	0/1:22,0:21:27.60:82,0,28	0/1:8,1:9:16.62:68,0,17
chr10	9544302	.	A	AGTGT	4645.07	PASS	AB=0.968;AC=36;AF=0.692;AN=52;BaseQRankSum=-1.431;DP=732;FS=7.542;HRun=0;HaplotypeScore=212.3201;InbreedingCoeff=0.0336;MQ=52.23;MQ0=9;MQRankSum=-2.655;QD=7.68;ReadPosRankSum=-5.039;VQSLOD=1.3799;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:29:24.71:331,25,0	0/1:20,0:21:26.02:26,0,133	./.	./.	1/1:32,0:32:27.67:387,28,0	1/1:33,0:33:33.57:496,34,0	1/1:23,0:23:20.25:293,20,0	1/1:36,0:36:14:81,14,0	0/1:27,0:28:4.82:325,0,5	1/1:32,0:32:2.31:6,2,0	1/1:21,0:21:3.01:48,3,0	0/0:19,0:18:32.89:0,33,344	0/1:25,0:25:3.86:4,0,252	0/1:24,0:24:13.84:14,0,243	1/1:19,0:19:3.01:43,3,0	0/1:23,0:24:8.48:192,0,8	0/0:36,0:36:4.33:0,4,380	1/1:19,0:18:3.81:26,4,0	1/1:11,8:20:32.31:540,32,0	0/1:21,15:39:15.09:529,0,15	1/1:16,17:35:18.48:318,18,0	0/1:26,0:26:47.78:48,0,148	0/0:19,0:19:0.43:0,0,1	1/1:38,0:36:7.20:76,7,0	1/1:33,0:33:57.59:802,58,0	0/1:14,0:14:2.38:2,0,38	0/1:23,0:22:27.18:27,0,163	0/1:10,0:10:30.40:30,0,144
chr10	9544306	.	T	TGTGA	2729.29	PASS	AB=1.000;AC=16;AF=0.286;AN=56;BaseQRankSum=1.170;DP=730;FS=1.302;HRun=0;HaplotypeScore=214.7602;InbreedingCoeff=-0.0485;MQ=50.30;MQ0=9;MQRankSum=-2.169;QD=6.77;ReadPosRankSum=6.754;VQSLOD=2.3323;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:29:99:133,0,180	0/0:21,0:21:41.56:0,42,372	0/0:27,0:6:8.15:0,8,97	0/0:29,0:12:23.18:0,23,242	0/1:33,0:33:99:178,0,132	0/1:32,0:32:99:223,0,129	0/1:24,0:24:99:129,0,216	0/0:35,0:35:95.21:0,95,674	1/1:2,24:27:18.19:502,18,0	0/1:31,0:31:99:276,0,150	1/1:21,0:21:5.98:81,6,0	0/0:19,0:18:51.03:0,51,638	0/0:25,0:25:60.77:0,61,612	0/0:24,0:24:56.56:0,57,594	0/1:19,0:19:3.97:124,0,4	0/1:22,0:22:72.26:72,0,205	0/0:36,0:36:97.30:0,97,986	0/0:19,0:18:41.19:0,41,289	0/1:19,0:18:99:245,0,107	0/1:36,0:36:99:282,0,337	0/1:36,0:36:99:138,0,239	0/0:27,0:27:53.11:0,53,501	0/0:17,0:17:0.47:0,0,1	0/1:38,0:36:44.76:174,0,45	0/1:36,0:36:99:336,0,153	0/0:14,0:14:13.94:0,14,241	0/0:24,0:23:61.92:0,62,567	0/0:10,0:10:8.88:0,9,273
chr10	9544308	.	T	TGA	838	PASS	AB=0.966;AC=16;AF=0.286;AN=56;BaseQRankSum=3.535;DP=729;FS=2.319;HRun=0;HaplotypeScore=197.9388;InbreedingCoeff=-0.0344;MQ=51.82;MQ0=9;MQRankSum=-3.469;QD=2.32;ReadPosRankSum=5.515;VQSLOD=2.3587;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:30:2.24:2,0,192	0/1:19,0:19:39.73:40,0,201	0/0:27,0:6:8.15:0,8,97	0/0:31,0:14:23.19:0,23,249	0/1:33,0:33:2.64:3,0,171	0/1:34,0:34:11.96:12,0,162	0/0:24,0:24:12.68:0,13,241	0/0:35,0:35:99:0,102,741	1/1:25,1:26:23.65:271,24,0	0/1:31,0:31:99:276,0,151	1/1:10,10:20:5.98:56,6,0	0/0:19,0:18:49.59:0,50,445	0/0:25,0:25:36.70:0,37,305	0/1:24,0:24:14.26:14,0,317	0/1:19,0:19:24.94:121,0,25	0/0:22,0:22:16.22:0,16,213	0/0:36,0:36:77.74:0,78,614	0/0:18,0:17:49.66:0,50,354	0/1:19,0:18:25.98:26,0,147	0/0:36,0:36:1.22:0,1,346	0/0:35,0:35:3.34:0,3,255	0/0:26,0:26:2.86:0,3,277	0/1:5,12:17:0.02:0,0,0	0/1:38,0:36:46.85:150,0,47	0/1:35,0:35:13.48:13,0,192	0/1:16,0:16:0.36:0,0,202	0/0:24,0:23:34.79:0,35,364	0/0:10,0:10:1.75:0,2,146
chr10	9544315	.	G	GTGTA	5003.35	PASS	AB=0.951;AC=18;AF=0.321;AN=56;BaseQRankSum=0.495;DP=728;FS=3.195;HRun=0;HaplotypeScore=203.6724;InbreedingCoeff=0.1322;MQ=51.62;MQ0=12;MQRankSum=-0.727;QD=12.32;ReadPosRankSum=3.302;VQSLOD=4.6521;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:26,5:30:12.42:464,12,0	0/0:19,0:19:42.38:0,42,420	0/0:26,0:6:15.86:0,16,145	0/0:32,0:13:24.02:0,24,225	0/1:25,7:32:6.67:472,0,7	1/1:26,7:34:8.19:647,8,0	0/1:21,5:26:18.73:496,0,19	0/1:37,0:37:99:393,0,148	0/1:25,0:25:35.80:169,0,36	0/0:31,0:31:79.99:0,80,569	1/1:21,0:21:0.07:20,0,0	0/0:19,0:18:48.03:0,48,611	0/0:23,0:23:55.47:0,55,577	0/0:23,0:23:53.25:0,53,572	0/0:17,0:17:11.97:0,12,94	0/1:19,3:23:99:287,0,138	0/0:35,0:35:89.76:0,90,903	0/1:17,0:16:42.40:157,0,42	0/1:16,0:15:52.40:264,0,52	0/1:36,0:36:99:297,0,243	0/1:34,0:34:99:146,0,172	0/0:27,0:27:58.31:0,58,531	0/0:17,0:17:5.96:0,6,45	0/1:38,0:36:0.40:0,0,150	1/1:24,11:36:60.69:1190,61,0	0/0:18,0:18:46.86:0,47,362	0/0:25,0:24:59.77:0,60,539	0/0:10,0:10:8.86:0,9,270
chr10	9544790	.	G	GC	20646.46	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-12.983;DP=672;FS=13.061;HRun=2;HaplotypeScore=58.2805;InbreedingCoeff=0.9980;MQ=84.32;MQ0=0;MQRankSum=-6.618;QD=38.23;ReadPosRankSum=5.366;VQSLOD=4.0734;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,23:25:63.21:898,63,0	1/1:1,6:7:18.06:259,18,0	0/0:26,0:25:67.42:0,67,787	0/0:17,0:18:42.90:0,43,461	1/1:0,24:24:69.23:992,69,0	1/1:0,25:25:69.23:994,69,0	1/1:1,30:31:66.22:950,66,0	1/1:1,25:26:72.21:1000,72,0	1/1:1,26:27:69.23:993,69,0	1/1:0,34:34:99:1404,99,0	1/1:2,17:19:48.16:681,48,0	1/1:0,25:25:69.23:993,69,0	1/1:0,15:15:39.13:561,39,0	1/1:1,23:24:57.19:821,57,0	1/1:1,31:32:84.28:1210,84,0	1/1:0,20:20:60.20:864,60,0	1/1:1,26:27:75.25:1080,75,0	1/1:3,13:17:36.12:506,36,0	0/0:24,0:24:66.21:0,66,818	0/0:32,0:32:96.30:0,96,1188	0/0:32,0:32:93.29:0,93,1153	1/1:1,24:25:72.24:1033,72,0	1/1:0,30:30:78.26:1114,78,0	1/1:0,20:20:54.18:778,54,0	1/1:0,20:20:60.20:864,60,0	1/1:0,23:24:72.21:1016,72,0	1/1:1,30:31:81.27:1163,81,0	1/1:0,11:11:33.11:475,33,0
chr10	9547041	.	TTG	T	1111.30	PASS	AB=0.953;AC=8;AF=0.143;AN=56;BaseQRankSum=2.156;DP=737;FS=2.819;HRun=0;HaplotypeScore=172.7076;InbreedingCoeff=0.6654;MQ=57.12;MQ0=10;MQRankSum=3.129;QD=8.36;ReadPosRankSum=3.043;VQSLOD=3.6841;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:93.78:0,94,1449	0/0:14,0:15:23.18:0,23,217	0/0:28,0:22:23.41:0,23,349	0/0:41,0:28:42.96:0,43,680	0/0:26,1:28:8.81:0,9,779	0/0:21,0:21:34:0,34,539	0/0:31,1:32:14.25:0,14,730	0/0:35,1:36:32.29:0,32,972	0/0:28,0:28:54.10:0,54,817	0/0:24,0:23:54.52:0,55,733	0/0:23,1:24:6.02:0,6,87	0/0:28,1:29:43.37:0,43,408	0/0:15,0:15:32.88:0,33,354	0/0:33,0:32:21.73:0,22,196	0/0:27,0:27:26.45:0,26,303	0/1:37,2:38:25.70:26,0,580	0/0:14,0:13:12.03:0,12,137	0/0:20,0:20:36.12:0,36,559	1/1:7,5:11:18.02:215,18,0	1/1:3,21:22:41.97:517,42,0	1/1:16,21:32:35.84:496,36,0	0/0:27,0:27:34.28:0,34,317	0/0:21,0:21:31.15:0,31,216	0/0:32,1:33:17.37:0,17,153	0/1:20,1:21:9.71:10,0,515	0/0:24,0:24:44.33:0,44,435	0/0:23,0:23:38.56:0,39,382	0/0:10,0:10:20.78:0,21,199
chr10	9547073	.	CTGTGTG	C	1636.50	PASS	AB=0.858;AC=11;AF=0.204;AN=54;BaseQRankSum=3.877;DP=756;FS=8.714;HRun=0;HaplotypeScore=233.4108;InbreedingCoeff=-0.0515;MQ=47.61;MQ0=27;MQRankSum=-2.427;QD=7.31;ReadPosRankSum=-0.379;VQSLOD=1.4091;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:43:81.28:0,81,2240	0/1:9,2:11:8.91:50,0,9	0/0:34,0:9:6.02:0,6,137	0/0:58,0:19:27.04:0,27,521	0/0:25,0:25:36.28:0,36,994	0/0:27,0:25:27.08:0,27,703	0/0:35,0:34:54.17:0,54,1261	0/0:27,0:27:47.86:0,48,947	0/0:11,0:25:30.10:0,30,835	0/0:33,0:32:77.68:0,78,1517	./.	0/1:25,5:30:83.24:244,0,83	0/1:17,2:20:32.09:219,0,32	0/1:28,3:30:31.18:241,0,31	0/0:26,0:30:20.49:0,20,311	0/0:39,0:39:48.57:0,49,1310	0/0:14,0:13:5.98:0,6,34	0/0:21,0:22:30.10:0,30,827	0/0:19,0:16:30.08:0,30,547	0/0:27,0:27:21.58:0,22,499	0/0:26,0:20:10.59:0,11,219	0/1:23,4:27:12.04:148,0,12	0/1:17,5:21:12.69:13,0,43	1/1:23,3:26:4.56:126,5,0	0/0:25,0:25:45.14:0,45,1160	0/1:24,1:25:55.56:285,0,56	0/1:19,3:21:12.47:337,0,12	0/1:6,4:10:20.34:119,0,20
chr10	9547092	.	T	TGA	3874.83	PASS	AB=0.746;AC=41;AF=0.732;AN=56;BaseQRankSum=-0.068;DP=710;FS=7.472;HRun=0;HaplotypeScore=194.7387;InbreedingCoeff=0.3672;MQ=47.25;MQ0=19;MQRankSum=-0.144;QD=7.19;ReadPosRankSum=1.857;VQSLOD=2.5483;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:13,31:45:16.27:699,0,16	1/1:10,0:10:5.98:57,6,0	0/0:32,0:7:8.92:0,9,69	0/0:53,0:13:5.64:0,6,34	1/1:6,15:22:18.03:279,18,0	1/1:6,16:20:17.99:257,18,0	1/1:15,24:38:14.81:241,15,0	1/1:23,0:23:7.97:274,8,0	0/1:22,1:23:88.73:150,0,89	0/0:34,0:34:29.62:0,30,201	0/0:28,0:27:5.73:0,6,24	1/1:26,0:26:25.13:199,25,0	1/1:16,0:15:11.60:98,12,0	1/1:32,0:32:11.13:44,11,0	0/1:42,0:42:4.84:5,0,14	1/1:8,27:36:9.65:368,10,0	1/1:11,0:11:5.97:46,6,0	0/1:7,10:18:48.28:215,0,48	1/1:17,0:15:12.44:98,12,0	1/1:26,0:25:8.83:30,9,0	1/1:16,0:12:6.04:48,6,0	1/1:26,0:26:8.54:28,9,0	1/1:20,0:19:8.64:28,9,0	0/0:23,0:23:2.03:0,2,7	0/1:6,20:26:5.95:392,0,6	1/1:18,0:18:26.08:191,26,0	1/1:17,0:16:10.44:74,10,0	1/1:8,0:8:6:54,6,0
chr10	9547113	.	G	GAGAGAA	3091.89	PASS	AB=0.863;AC=26;AF=0.464;AN=56;BaseQRankSum=8.811;DP=731;FS=0.000;HRun=0;HaplotypeScore=230.0970;InbreedingCoeff=0.4841;MQ=51.03;MQ0=15;MQRankSum=-7.817;QD=7.95;ReadPosRankSum=-2.135;VQSLOD=2.1250;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:59.36:0,59,1033	1/1:2,10:13:5.67:152,6,0	0/0:24,0:12:32.77:0,33,532	0/0:32,0:15:30.10:0,30,575	0/0:22,0:22:42.25:0,42,673	0/0:21,0:19:26.26:0,26,480	0/0:31,0:30:39.56:0,40,702	0/0:33,0:33:80.99:0,81,1324	0/0:27,0:27:54.10:0,54,1047	0/0:40,0:36:56.87:0,57,835	0/1:28,0:27:55.67:95,0,56	1/1:6,18:31:28.13:587,28,0	1/1:5,13:19:12.73:309,13,0	1/1:8,26:38:8.15:61,8,0	0/1:48,0:47:37.26:283,0,37	0/0:30,0:30:41.41:0,41,731	1/1:3,10:18:8.07:209,8,0	0/0:15,0:15:30.10:0,30,569	0/1:18,0:16:99:140,0,152	1/1:20,0:19:2.92:17,3,0	0/1:25,0:21:35.94:36,0,75	1/1:7,18:28:19.65:122,20,0	1/1:9,7:17:4.32:23,4,0	1/1:9,21:32:5.04:18,5,0	0/0:25,0:25:35.79:0,36,628	1/1:4,0:23:5.87:833,6,0	0/1:5,0:17:6.36:249,0,6	0/1:4,0:12:4.21:155,0,4
chr10	9547117	.	G	GAGAGAA	3680.63	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=7.931;DP=724;FS=9.947;HRun=0;HaplotypeScore=236.6062;InbreedingCoeff=0.3643;MQ=53.27;MQ0=14;MQRankSum=-9.254;QD=9.69;ReadPosRankSum=-4.602;VQSLOD=0.2432;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:56.53:0,57,1014	1/1:12,0:12:5.72:76,6,0	0/0:25,0:13:35.59:0,36,643	0/0:30,0:16:33.11:0,33,671	0/0:22,0:22:42.25:0,42,690	0/0:22,0:20:10.68:0,11,452	0/0:30,0:29:39.52:0,40,724	0/0:33,0:33:81.19:0,81,1434	0/0:26,0:26:54.17:0,54,1130	0/1:39,0:35:99:195,0,246	1/1:23,0:24:25.05:250,25,0	0/1:31,0:31:34.63:294,0,35	0/1:20,0:19:4.63:164,0,5	0/1:39,0:39:0.13:0,0,35	1/1:49,0:48:93.53:692,94,0	0/0:30,0:30:47.41:0,47,789	0/1:18,0:18:23:91,0,23	0/0:14,0:14:30.10:0,30,587	1/1:5,11:18:35.47:622,35,0	1/1:5,15:20:25.50:161,26,0	1/1:22,4:22:31.29:458,31,0	0/0:30,0:30:17.75:0,18,124	0/0:16,0:16:4.16:0,4,32	0/1:32,0:32:0.01:0,0,20	0/0:25,0:25:35.79:0,36,652	0/1:21,0:21:99:407,0,104	0/1:18,0:17:49.04:151,0,49	0/1:10,0:10:10.96:119,0,11
chr10	9547634	.	TG	T	3077.25	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=10.475;DP=795;FS=0.431;HRun=1;HaplotypeScore=75.0881;InbreedingCoeff=0.9891;MQ=82.56;MQ0=0;MQRankSum=-1.293;QD=37.08;ReadPosRankSum=1.713;VQSLOD=4.1820;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,150,2333	0/0:15,0:15:42.14:0,42,669	0/0:21,0:21:54.17:0,54,796	0/0:25,0:25:67.46:0,67,1005	0/0:31,0:31:93.32:0,93,1483	0/0:27,0:27:78.25:0,78,1222	0/0:26,0:26:78.27:0,78,1244	0/0:34,0:34:99:0,102,1626	0/0:23,0:23:69.24:0,69,1100	0/0:42,0:42:99:0,117,1845	0/0:21,0:21:63.21:0,63,1007	0/0:42,0:42:99:0,126,1986	0/0:30,0:30:90.29:0,90,1413	0/0:37,0:37:99:0,111,1739	0/0:44,0:44:99:0,132,2093	0/0:26,0:26:78.27:0,78,1247	0/0:21,0:21:60.20:0,60,959	0/0:23,0:23:66.21:0,66,1026	1/1:1,20:22:63.56:828,64,0	1/1:0,24:24:63.21:881,63,0	1/1:0,37:37:99:1511,108,0	0/0:31,0:31:93.30:0,93,1459	0/0:21,0:21:63.20:0,63,979	0/0:24,0:24:72.23:0,72,1122	0/0:28,0:28:84.25:0,84,1275	0/0:29,0:29:84.29:0,84,1343	0/0:37,0:36:99:0,111,1748	0/0:4,0:4:12.04:0,12,192
chr10	9548446	.	T	TC	3936.81	PASS	AB=0.852;AC=23;AF=0.411;AN=56;BaseQRankSum=-7.912;DP=545;FS=10.738;HRun=9;HaplotypeScore=68.6894;InbreedingCoeff=0.6765;MQ=77.63;MQ0=0;MQRankSum=-1.242;QD=15.03;ReadPosRankSum=0.060;VQSLOD=2.6929;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:17,26:43:52.02:564,52,0	0/0:9,1:10:20.98:0,21,182	0/0:15,0:15:20.65:0,21,158	0/1:15,0:15:28.28:28,0,112	1/1:6,13:19:1.02:239,1,0	1/1:5,16:21:10.18:339,10,0	1/1:8,18:26:2.03:479,2,0	0/1:10,11:21:2.01:199,0,2	0/0:13,0:13:35.98:0,36,312	0/0:3,0:20:38.10:0,38,129	0/0:1,0:15:28.52:0,29,83	0/0:19,0:19:44.98:0,45,390	0/0:12,0:12:32.99:0,33,286	0/0:18,0:18:44.99:0,45,390	0/0:3,0:24:40.73:0,41,120	1/1:3,17:20:45.12:497,45,0	0/0:31,1:33:49.60:0,50,643	1/1:4,15:19:16.01:405,16,0	1/1:10,8:18:0.11:238,0,0	1/1:5,10:15:23.65:235,24,0	1/1:7,10:17:4.02:272,4,0	0/0:17,0:17:50.99:0,51,443	0/0:15,0:15:35.97:0,36,309	0/0:29,0:29:77.95:0,78,672	1/1:6,13:19:39.57:427,40,0	0/0:17,0:18:34.97:0,35,292	0/0:24,0:25:65.02:0,65,553	0/1:8,1:9:12.19:12,0,135
chr10	9549102	.	C	CTA	2038.51	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=-2.339;DP=486;FS=16.245;HRun=0;HaplotypeScore=113.6339;InbreedingCoeff=0.8327;MQ=70.09;MQ0=11;MQRankSum=2.409;QD=10.40;ReadPosRankSum=0.875;VQSLOD=2.2609;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:35.85:0,36,284	1/1:3,0:3:5.99:50,6,0	0/0:23,0:21:60.01:0,60,599	0/0:24,0:18:41.11:0,41,414	0/0:17,0:17:23.90:0,24,187	0/0:25,0:25:47.89:0,48,386	0/0:25,0:25:26.95:0,27,220	0/0:20,0:19:50.86:0,51,424	0/0:18,0:18:23.84:0,24,182	0/0:12,0:12:32.84:0,33,264	0/0:13,0:13:29.96:0,30,249	1/1:0,14:14:9.03:158,9,0	1/1:12,0:12:3.01:41,3,0	1/1:3,6:9:3:56,3,0	0/0:11,0:11:23.97:0,24,200	0/0:12,0:12:29.32:0,29,227	1/1:5,20:24:9.66:375,10,0	0/0:15,0:14:38.70:0,39,285	0/0:14,0:13:37.83:0,38,289	0/1:11,0:11:4.34:4,0,64	0/0:17,0:16:18.71:0,19,234	1/1:4,20:24:12:181,12,0	1/1:15,1:15:22.11:303,22,0	1/1:4,22:29:12.04:224,12,0	0/0:10,0:9:17.97:0,18,146	1/1:15,0:15:6.83:335,7,0	1/1:2,15:18:12:161,12,0	1/1:19,0:19:46.09:355,46,0
chr10	9549103	.	TACACACACACACACACACACACAC	T	6288.77	PASS	AB=0.844;AC=16;AF=0.286;AN=56;BaseQRankSum=7.139;DP=497;FS=20.056;HRun=0;HaplotypeScore=245.4777;InbreedingCoeff=0.6614;MQ=68.42;MQ0=11;MQRankSum=-6.289;QD=36.14;ReadPosRankSum=1.184;VQSLOD=2.4504;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:24,10:34:15.05:941,15,0	0/0:3,0:3:6.02:0,6,408	0/0:22,0:20:12.02:0,12,222	0/0:24,0:18:9.03:0,9,221	1/1:6,7:16:24.08:1245,24,0	1/1:14,10:25:24.08:1485,24,0	1/1:19,5:24:6.02:377,6,0	1/1:18,2:19:6.02:87,6,0	0/1:12,0:18:16.71:86,0,17	0/0:12,0:12:27.09:0,27,1089	0/0:13,0:13:18.06:0,18,494	0/0:14,0:14:9.03:0,9,944	0/0:3,0:12:2.31:0,2,310	0/0:8,0:8:3.95:0,4,315	0/0:12,0:12:9.03:0,9,337	1/1:4,7:12:21.07:1296,21,0	0/0:27,0:25:33.11:0,33,3496	0/1:14,1:14:36.92:228,0,37	0/0:17,0:16:23.44:0,23,1438	0/0:13,0:13:17.01:0,17,1713	0/0:21,0:20:30.10:0,30,2503	0/0:24,0:24:11.99:0,12,1252	0/0:16,0:15:27.09:0,27,2473	0/0:30,0:30:21.06:0,21,2241	1/1:6,3:9:9.03:544,9,0	0/0:18,0:18:33.11:0,33,2979	0/0:18,0:18:9.50:0,10,799	0/0:18,0:19:33.11:0,33,2351
chr10	9549144	.	ACACACACACG	A	2415.10	PASS	AB=1.000;AC=14;AF=0.250;AN=56;BaseQRankSum=8.913;DP=551;FS=0.000;HRun=0;HaplotypeScore=173.4893;InbreedingCoeff=0.1986;MQ=57.89;MQ0=15;MQRankSum=-3.877;QD=12.78;ReadPosRankSum=5.989;VQSLOD=2.2686;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:22:78.42:243,0,78	0/0:3,0:3:6:0,6,71	0/0:16,0:6:16.12:0,16,100	0/0:26,0:16:39.46:0,39,295	0/1:19,0:19:68.01:273,0,68	0/1:21,0:20:44.87:399,0,45	0/1:15,0:15:86.26:86,0,113	0/0:27,0:25:70.83:0,71,515	0/1:13,0:13:91.53:92,0,94	1/1:0,17:17:44.88:477,45,0	1/1:14,1:15:27.92:301,28,0	0/0:17,0:17:32.86:0,33,945	0/0:14,0:14:23.89:0,24,705	0/0:15,0:15:29.62:0,30,481	1/1:1,22:23:6.02:186,6,0	0/1:17,0:17:32.88:372,0,33	0/0:32,0:32:66.58:0,67,2015	0/1:14,0:12:19.03:19,0,154	0/0:21,0:21:59.68:0,60,667	0/0:23,0:23:50.68:0,51,983	0/0:28,0:27:47.88:0,48,1031	0/0:22,0:22:23.87:0,24,710	0/0:18,0:18:36.02:0,36,1120	0/0:40,0:40:68.56:0,69,2193	0/1:12,0:11:91.91:138,0,92	0/0:23,0:23:38.49:0,38,1359	0/0:18,0:18:38.79:0,39,693	0/0:19,0:19:54.30:0,54,1398
chr10	9553020	.	TAC	T	1814.22	PASS	AB=0.730;AC=39;AF=0.722;AN=54;BaseQRankSum=6.447;DP=489;FS=0.651;HRun=0;HaplotypeScore=87.7237;InbreedingCoeff=0.5527;MQ=56.83;MQ0=4;MQRankSum=-4.471;QD=5.20;ReadPosRankSum=-0.089;VQSLOD=2.8867;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:27:11.36:56,11,0	1/1:2,6:8:5.87:65,6,0	0/0:16,0:9:0.47:0,0,1	./.	1/1:10,0:18:11.32:55,11,0	1/1:11,0:16:11.36:56,11,0	1/1:12,0:15:2.84:14,3,0	1/1:21,0:20:4.96:23,5,0	0/0:16,0:16:15.05:0,15,224	1/1:6,0:12:11.36:56,11,0	1/1:8,0:12:2.84:14,3,0	1/1:10,9:21:20.87:202,21,0	1/1:4,5:11:11.76:95,12,0	0/1:9,7:16:57.25:95,0,57	1/1:10,0:25:39.77:196,40,0	1/1:10,0:17:19.89:98,20,0	1/1:11,7:18:12.03:131,12,0	0/1:12,0:16:7.85:42,0,8	0/0:17,0:20:24.05:0,24,279	0/0:6,0:12:18.04:0,18,218	0/0:24,0:24:35.86:0,36,408	1/1:9,7:16:11.87:113,12,0	0/1:9,5:14:11.93:86,0,12	0/0:35,0:36:45.11:0,45,616	1/1:7,0:16:25.57:126,26,0	1/1:13,5:20:23.56:206,24,0	1/1:8,11:21:23.95:225,24,0	1/1:4,0:5:5.83:37,6,0
chr10	9555063	.	G	GA	3911.61	PASS	AB=0.838;AC=43;AF=0.768;AN=56;BaseQRankSum=5.904;DP=411;FS=1.297;HRun=11;HaplotypeScore=95.2487;InbreedingCoeff=0.5608;MQ=50.66;MQ0=12;MQRankSum=-3.735;QD=10.96;ReadPosRankSum=-0.276;VQSLOD=3.2308;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:27:49.69:209,50,0	1/1:3,3:5:7.56:61,8,0	0/0:4,0:3:1.97:0,2,6	0/1:8,0:6:8.77:17,0,9	1/1:13,0:13:27.50:133,28,0	1/1:19,0:19:43.12:185,43,0	1/1:5,0:5:2.62:11,3,0	1/1:16,5:20:21.46:192,21,0	0/0:9,0:9:11.91:0,12,93	1/1:7,8:15:26.88:244,27,0	1/1:9,8:16:26.83:248,27,0	1/1:13,11:23:36.37:295,36,0	1/1:12,4:17:24.95:209,25,0	1/1:11,4:14:6.77:100,7,0	1/1:7,0:14:25.77:137,26,0	0/1:7,2:9:8.51:51,0,9	1/1:15,8:21:15.01:277,15,0	0/1:9,7:15:1.24:230,0,1	0/0:18,0:17:31.78:0,32,226	0/0:17,1:19:17.15:0,17,299	0/0:2,0:2:5.98:0,6,46	1/1:9,8:15:18.92:181,19,0	1/1:8,6:14:3.89:208,4,0	1/1:5,7:11:20.53:190,21,0	1/1:20,0:19:32.16:136,32,0	1/1:12,7:18:22.74:242,23,0	1/1:12,4:13:26.64:222,27,0	1/1:4,3:6:1.24:134,1,0
chr10	9555069	.	A	AAG	2739.22	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=0.576;DP=415;FS=0.000;HRun=0;HaplotypeScore=92.8790;InbreedingCoeff=0.4512;MQ=54.34;MQ0=8;MQRankSum=-4.049;QD=16.50;ReadPosRankSum=5.130;VQSLOD=3.5627;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,21:26:41.88:874,42,0	0/0:7,0:6:6.47:0,6,29	0/0:8,0:6:8.67:0,9,53	0/0:8,0:6:4.57:0,5,64	1/1:2,10:12:30.02:452,30,0	1/1:3,17:20:40.28:807,40,0	1/1:5,2:7:8.99:100,9,0	0/0:20,0:18:26.66:0,27,190	0/0:12,0:12:36.01:0,36,379	0/0:16,0:16:8.96:0,9,157	0/0:18,0:17:27.91:0,28,153	0/0:23,0:22:15.58:0,16,228	0/1:14,0:14:11.67:12,0,61	0/1:18,0:17:1.85:2,0,98	0/1:12,0:12:30.88:31,0,66	0/0:7,0:7:4.40:0,4,71	0/1:19,0:17:22.18:22,0,108	0/0:20,0:19:20.29:0,20,133	0/0:19,0:19:54.07:0,54,642	0/0:21,0:21:62.82:0,63,780	0/0:3,0:3:6.02:0,6,88	0/0:15,0:13:14.82:0,15,99	0/0:12,0:12:7.17:0,7,93	0/0:12,0:11:0.15:0,0,30	1/1:4,14:18:39.10:610,39,0	0/0:21,0:20:10.09:0,10,210	0/1:19,0:16:2.32:2,0,109	0/0:7,0:6:12.47:0,12,84
chr10	9555074	.	AG	A	1097.36	PASS	AB=1.000;AC=34;AF=0.607;AN=56;BaseQRankSum=8.999;DP=405;FS=2.583;HRun=1;HaplotypeScore=90.9356;InbreedingCoeff=0.3479;MQ=55.63;MQ0=7;MQRankSum=-0.299;QD=3.33;ReadPosRankSum=3.690;VQSLOD=0.3928;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:27:14.63:67,0,15	0/1:7,0:6:0.06:0,0,6	0/1:8,0:6:6.86:25,0,7	0/0:9,0:7:20.80:0,21,163	1/1:11,1:12:17.24:62,17,0	1/1:20,1:21:11.18:70,11,0	1/1:2,4:6:7.13:24,7,0	1/1:16,0:14:22.13:100,22,0	0/0:9,0:9:27.01:0,27,260	1/1:18,0:18:22.62:118,23,0	1/1:16,0:15:26.89:127,27,0	0/1:23,0:22:25.60:26,0,53	0/1:14,0:14:5.74:30,0,6	0/1:15,0:14:1.63:21,0,2	0/0:10,0:10:20.18:0,20,126	0/1:6,0:6:1.79:13,0,2	1/1:19,0:17:16.17:106,16,0	0/1:21,0:20:15.48:61,0,15	0/0:23,0:23:64.42:0,64,566	0/0:21,0:21:47.31:0,47,556	0/0:3,0:3:9.01:0,9,90	1/1:13,0:12:3.48:29,3,0	0/1:14,0:14:27.43:50,0,27	1/1:12,0:11:12.77:57,13,0	1/1:14,3:17:25.93:90,26,0	1/1:20,0:19:20.94:125,21,0	1/1:18,0:15:8.93:60,9,0	0/1:6,0:6:0.75:18,0,1
chr10	9555075	.	G	GA	6117.43	PASS	AB=0.958;AC=44;AF=0.786;AN=56;BaseQRankSum=5.180;DP=411;FS=1.732;HRun=11;HaplotypeScore=75.8451;InbreedingCoeff=0.7631;MQ=55.80;MQ0=7;MQRankSum=-1.984;QD=17.09;ReadPosRankSum=2.574;VQSLOD=5.9046;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,21:27:24.30:462,24,0	1/1:2,5:6:6.49:67,6,0	0/1:8,0:6:11.01:11,0,41	0/0:9,0:7:20.47:0,20,155	1/1:5,8:13:24.54:265,25,0	1/1:7,14:21:54.13:586,54,0	1/1:4,2:6:9.02:99,9,0	1/1:11,8:17:26.78:276,27,0	0/0:10,0:10:26.98:0,27,234	1/1:2,16:18:45.59:496,46,0	1/1:1,15:15:39.90:405,40,0	1/1:8,15:22:34.80:361,35,0	1/1:3,12:15:25.42:263,25,0	1/1:3,11:13:9.50:100,9,0	0/0:9,1:10:22.53:0,23,157	1/1:0,6:6:9.02:99,9,0	1/1:8,12:18:42.09:450,42,0	1/1:5,16:20:23.31:292,23,0	0/1:20,2:22:3.40:3,0,426	0/0:21,0:21:50.96:0,51,442	0/0:3,0:3:9:0,9,78	1/1:3,10:12:18.93:195,19,0	1/1:1,13:14:27.07:294,27,0	1/1:1,11:11:21.53:231,22,0	1/1:9,8:17:30.08:329,30,0	1/1:6,14:19:40.29:413,40,0	1/1:4,13:16:29.61:288,30,0	1/1:2,4:6:12.03:132,12,0
chr10	9555328	.	A	AGT	4708.70	PASS	AB=1.000;AC=16;AF=0.286;AN=56;BaseQRankSum=1.573;DP=686;FS=23.729;HRun=0;HaplotypeScore=175.4109;InbreedingCoeff=0.7244;MQ=69.17;MQ0=19;MQRankSum=-1.311;QD=21.31;ReadPosRankSum=-2.568;VQSLOD=2.8395;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:26,12:34:48.55:731,49,0	0/0:7,0:7:15.05:0,15,196	0/0:54,0:36:74.57:0,75,914	0/0:44,0:23:32.08:0,32,484	1/1:7,13:18:29.92:510,30,0	1/1:6,19:25:38.48:637,38,0	1/1:8,24:32:63.10:1014,63,0	0/0:36,0:36:71.32:0,71,924	1/1:1,18:19:39.13:669,39,0	0/0:23,0:23:56.40:0,56,714	0/0:12,0:12:4.92:0,5,199	0/0:28,0:28:1.36:0,1,588	0/0:15,0:15:39.13:0,39,511	0/1:24,0:24:10.51:11,0,351	1/1:11,9:16:5.28:354,5,0	0/0:18,0:18:21.20:0,21,453	0/0:28,0:28:15.30:0,15,468	0/0:15,0:15:17.92:0,18,343	0/0:16,0:16:39.12:0,39,500	0/0:20,0:20:49.84:0,50,651	0/0:48,0:48:99:0,126,1623	0/0:11,0:11:2.87:0,3,145	0/1:17,0:17:25.88:26,0,58	0/0:21,0:21:27.25:0,27,348	1/1:9,17:22:47.87:758,48,0	0/0:26,0:26:64.76:0,65,844	0/0:30,0:30:49.60:0,50,720	0/0:13,0:13:29.07:0,29,388
chr10	9555340	.	C	CGTGTGTGTGT	8612.47	PASS	AB=0.741;AC=32;AF=0.571;AN=56;BaseQRankSum=-2.814;DP=722;FS=13.534;HRun=0;HaplotypeScore=242.0595;InbreedingCoeff=0.4297;MQ=58.39;MQ0=19;MQRankSum=-6.944;QD=16.37;ReadPosRankSum=1.322;VQSLOD=2.4575;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:35:71.59:72,0,376	1/1:3,0:8:6.02:141,6,0	0/1:52,0:29:4:4,0,176	0/1:45,0:23:5.56:6,0,196	0/0:9,0:17:0.62:0,1,104	0/1:13,0:22:14.88:15,0,235	0/0:14,0:37:8.83:0,9,500	1/1:35,0:36:33.11:740,33,0	0/0:18,0:19:39.13:0,39,1070	1/1:11,1:30:54.19:1399,54,0	0/0:5,0:12:3.01:0,3,30	1/1:9,0:33:23.84:586,24,0	0/1:7,0:18:42.75:587,0,43	1/1:7,0:26:15.05:395,15,0	0/0:8,0:16:29.86:0,30,361	1/1:6,0:19:21.07:621,21,0	1/1:16,0:29:24.90:679,25,0	1/1:6,0:19:21.07:499,21,0	0/0:19,0:19:23.44:0,23,468	0/0:14,0:18:33.08:0,33,772	0/0:49,0:51:99:0,102,2778	1/1:3,0:13:5.97:181,6,0	0/1:3,1:14:0:0,0,0	0/1:13,0:25:1.99:6,0,2	0/1:11,0:19:37.96:38,0,183	1/1:9,0:28:53.84:1218,54,0	1/1:6,0:30:39.13:1100,39,0	1/1:8,1:14:9.03:325,9,0
chr10	9556087	.	AT	A	3562.59	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=9.057;DP=691;FS=6.441;HRun=8;HaplotypeScore=75.4759;InbreedingCoeff=0.9996;MQ=80.03;MQ0=0;MQRankSum=-1.121;QD=26.39;ReadPosRankSum=3.127;VQSLOD=4.4256;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,30:31:81.12:782,81,0	0/0:11,0:11:30.09:0,30,362	0/0:21,0:20:42.23:0,42,464	0/0:15,0:15:29.44:0,29,361	1/1:1,29:30:81.12:781,81,0	1/1:1,21:22:63.10:608,63,0	1/1:0,26:26:66.10:637,66,0	0/0:35,0:36:84.11:0,84,983	0/0:31,0:31:84.25:0,84,1006	0/0:38,0:38:99:0,108,1292	0/0:19,0:19:51.16:0,51,616	0/0:30,0:30:75.23:0,75,906	0/0:25,0:25:75.20:0,75,881	0/0:23,0:23:69.21:0,69,833	0/0:19,0:19:51.16:0,51,616	0/0:27,0:27:75.22:0,75,896	0/0:23,0:23:63.19:0,63,761	0/0:11,0:11:30.05:0,30,346	0/0:18,0:18:45.12:0,45,526	0/0:35,0:35:96.25:0,96,1133	0/0:20,0:20:48.15:0,48,580	0/0:29,0:29:87.27:0,87,1050	0/0:27,0:27:78.23:0,78,928	0/0:23,0:23:63.19:0,63,761	1/1:0,26:26:78.13:753,78,0	0/0:27,0:27:75.23:0,75,906	0/0:30,0:29:84.23:0,84,988	0/0:17,0:17:51.16:0,51,614
chr10	9556102	.	A	AT	2734.05	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-10.671;DP=703;FS=0.000;HRun=5;HaplotypeScore=79.5935;InbreedingCoeff=0.9973;MQ=77.26;MQ0=0;MQRankSum=-1.086;QD=35.97;ReadPosRankSum=-2.299;VQSLOD=2.3348;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:87.19:0,87,925	0/0:10,0:10:30.08:0,30,322	0/0:21,0:19:44.95:0,45,449	0/0:10,0:10:20.08:0,20,199	0/0:29,0:29:78.19:0,78,838	0/0:21,0:21:54.13:0,54,580	0/0:26,0:26:69.17:0,69,741	0/0:35,0:35:96.21:0,96,1006	0/0:29,0:29:87.15:0,87,904	0/0:45,0:45:99:0,117,1251	0/0:22,0:22:63.16:0,63,677	0/0:27,0:27:78.17:0,78,822	0/0:26,0:26:75.14:0,75,786	0/0:27,0:27:75.19:0,75,806	0/0:19,0:19:54.11:0,54,564	0/0:27,0:27:75.12:0,75,773	0/0:17,0:17:45.11:0,45,484	0/0:10,0:10:24.04:0,24,248	1/1:1,21:22:66.21:864,66,0	1/1:0,35:35:99:1303,105,0	1/1:0,19:19:54.18:710,54,0	0/0:32,0:32:90.22:0,90,967	0/0:29,0:28:74.86:0,75,784	0/0:25,0:25:66.16:0,66,709	0/0:35,0:35:93.22:0,93,991	0/0:24,0:24:69.17:0,69,742	0/0:31,0:30:90.20:0,90,952	0/0:18,0:18:48.12:0,48,516
chr10	9556547	.	GAGAC	G	4293.30	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=-7.047;DP=772;FS=0.411;HRun=0;HaplotypeScore=187.8418;InbreedingCoeff=0.8649;MQ=69.89;MQ0=5;MQRankSum=0.278;QD=24.67;ReadPosRankSum=0.840;VQSLOD=4.5758;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,25:28:44.81:720,45,0	0/0:12,0:12:24.08:0,24,598	0/1:28,0:15:25.70:26,0,440	0/0:37,0:27:29.25:0,29,519	1/1:4,32:36:80.94:1337,81,0	1/1:3,22:24:39.13:661,39,0	1/1:2,27:29:51:786,51,0	0/0:45,0:45:99:0,114,2428	0/0:27,0:27:63.20:0,63,1534	0/0:32,0:32:80.75:0,81,1788	0/0:19,0:19:39.13:0,39,966	0/0:26,0:26:60.21:0,60,1466	0/0:31,0:31:84.21:0,84,1795	0/0:21,0:21:48.15:0,48,1111	0/0:24,0:24:20.75:0,21,276	0/0:25,0:25:63.20:0,63,1510	0/0:36,0:36:75.12:0,75,1701	0/0:22,0:22:63.05:0,63,1341	0/0:18,0:17:40.30:0,40,698	0/0:34,0:34:84.27:0,84,2016	0/0:32,0:32:81.25:0,81,1854	0/0:25,0:25:57.20:0,57,1410	0/0:30,0:30:84.25:0,84,1960	0/0:34,0:34:66.20:0,66,1550	1/1:5,23:28:48.15:764,48,0	0/0:33,0:33:84.25:0,84,1808	0/0:28,0:27:75.26:0,75,1805	0/0:7,0:7:6.02:0,6,126
chr10	9556580	.	TTAGA	T	4278.25	PASS	AB=0.939;AC=41;AF=0.854;AN=48;BaseQRankSum=0.202;DP=692;FS=0.668;HRun=0;HaplotypeScore=178.8827;InbreedingCoeff=0.6106;MQ=66.79;MQ0=3;MQRankSum=-0.202;QD=8.28;ReadPosRankSum=-0.014;VQSLOD=4.2264;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:22,4:26:15.05:228,15,0	1/1:5,0:12:11.70:89,12,0	./.	./.	0/0:33,0:36:30.08:0,30,473	1/1:18,2:20:9:112,9,0	1/1:22,0:22:5.90:63,6,0	./.	1/1:14,9:23:20.90:319,21,0	1/1:22,12:34:36.08:499,36,0	1/1:11,7:18:8.99:111,9,0	1/1:15,6:21:12.04:182,12,0	0/0:34,0:34:5.48:0,5,788	1/1:8,10:19:12.03:165,12,0	1/1:6,0:19:17.74:127,18,0	1/1:18,5:23:6.02:91,6,0	1/1:19,11:31:27.08:392,27,0	1/1:21,3:24:24:295,24,0	1/1:8,0:13:11.99:105,12,0	1/1:20,0:34:8.20:42,8,0	./.	1/1:17,11:28:15.05:229,15,0	1/1:22,13:35:23.91:365,24,0	1/1:17,11:29:14.97:228,15,0	1/1:19,11:30:33.11:502,33,0	0/1:29,2:31:43.10:43,0,793	1/1:19,6:24:6.02:91,6,0	0/0:2,0:7:12.02:0,12,180
chr10	9557203	.	A	AT	2098.50	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-11.120;DP=581;FS=0.000;HRun=8;HaplotypeScore=51.3652;InbreedingCoeff=0.9753;MQ=75.62;MQ0=0;MQRankSum=1.801;QD=27.61;ReadPosRankSum=-1.686;VQSLOD=3.4485;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:48.03:0,48,439	0/0:8,0:8:21:0,21,192	0/0:14,0:14:26.75:0,27,232	0/0:10,0:10:19.22:0,19,150	0/0:20,0:20:57.03:0,57,522	0/0:19,0:19:57.01:0,57,517	0/0:17,0:17:48.01:0,48,434	0/0:31,0:31:78.02:0,78,710	0/0:16,0:16:45.02:0,45,412	0/0:18,0:18:48.01:0,48,433	0/0:28,0:28:75.03:0,75,682	0/0:18,0:18:54.03:0,54,494	0/0:23,0:23:69.04:0,69,631	0/0:24,0:24:63.02:0,63,572	0/0:17,0:17:51.03:0,51,467	0/0:28,0:28:69.03:0,69,632	0/0:21,0:21:54.03:0,54,494	0/0:14,0:14:42.02:0,42,384	1/1:5,26:31:53.76:863,54,0	1/1:2,33:35:68.78:1032,69,0	1/1:0,10:10:30.09:346,30,0	0/0:28,0:28:75.04:0,75,686	0/0:26,0:26:78.02:0,78,709	0/0:21,0:20:60.03:0,60,549	0/0:24,0:24:69.03:0,69,631	0/0:24,0:24:72.04:0,72,659	0/0:36,0:36:84.39:0,84,932	0/0:3,0:3:9:0,9,82
chr10	9560590	.	TAC	T	356	PASS	AB=1.000;AC=20;AF=0.417;AN=48;BaseQRankSum=2.090;DP=487;FS=1.921;HRun=0;HaplotypeScore=134.9432;InbreedingCoeff=0.3095;MQ=63.54;MQ0=9;MQRankSum=-3.347;QD=1.47;ReadPosRankSum=1.275;VQSLOD=2.5109;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:25,1:26:2.64:18,3,0	0/0:11,0:11:5.85:0,6,37	./.	./.	1/1:14,4:21:14.76:132,15,0	1/1:10,5:15:3.01:32,3,0	./.	0/0:27,0:27:10.89:0,11,62	1/1:25,0:25:21.13:100,21,0	0/0:15,0:15:10.92:0,11,62	0/0:13,0:13:2.92:0,3,17	0/1:17,0:17:6.50:6,0,173	0/0:17,0:17:21.94:0,22,181	0/0:10,0:10:3.01:0,3,30	0/0:16,0:16:1.25:0,1,3	0/0:17,0:17:12.02:0,12,120	0/0:14,0:14:23.87:0,24,204	0/1:18,0:18:14.11:14,0,104	1/1:17,0:16:5.68:28,6,0	1/1:23,0:23:5.68:28,6,0	./.	0/1:19,0:19:15.19:15,0,46	0/0:17,0:17:26.51:0,27,217	0/0:17,0:16:17.95:0,18,156	1/1:8,8:18:8.61:97,9,0	0/1:18,0:18:4.84:5,0,76	0/1:18,0:18:30.46:30,0,63	0/1:8,0:7:7.12:7,0,60
chr10	9560592	.	C	CAT	4563.50	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=4.023;DP=497;FS=11.030;HRun=0;HaplotypeScore=127.4744;InbreedingCoeff=0.9485;MQ=59.92;MQ0=11;MQRankSum=0.577;QD=17.48;ReadPosRankSum=1.470;VQSLOD=4.7690;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:32.77:0,33,258	1/1:11,0:11:23.92:211,24,0	0/0:20,0:13:35.25:0,35,332	0/0:22,0:14:2.03:0,2,299	0/0:22,0:22:6.76:0,7,267	0/0:18,0:18:19.89:0,20,227	0/0:12,0:12:29.86:0,30,235	1/1:26,0:24:52.31:467,52,0	0/0:24,0:24:41.89:0,42,360	1/1:15,0:15:42.05:424,42,0	1/1:10,3:13:17.98:178,18,0	1/1:17,0:17:21.41:265,21,0	1/1:17,0:17:23.65:257,24,0	1/1:10,0:10:20.48:161,20,0	0/0:21,0:21:17.65:0,18,158	1/1:17,0:17:43.24:314,43,0	1/1:15,0:15:35:251,35,0	1/1:19,0:19:19.89:232,20,0	0/0:16,0:15:31.50:0,32,263	0/0:23,0:23:29.96:0,30,250	0/0:13,0:9:23.92:0,24,188	1/1:19,0:19:47.19:400,47,0	1/1:18,0:18:36.53:335,37,0	1/1:18,0:17:29.34:258,29,0	0/0:19,0:19:19.64:0,20,142	1/1:16,1:17:43.95:460,44,0	1/1:19,0:19:35.13:274,35,0	1/1:10,0:9:13.21:76,13,0
chr10	9560620	.	CACACACACACACACACAGAG	C	2946.07	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=-6.038;DP=559;FS=12.200;HRun=0;HaplotypeScore=284.4156;InbreedingCoeff=-0.3402;MQ=51.54;MQ0=21;MQRankSum=-0.853;QD=7.98;ReadPosRankSum=-7.200;VQSLOD=-0.0299;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:34:13.88:0,14,326	0/0:10,0:10:19.28:0,19,606	0/0:14,0:7:21.07:0,21,455	0/1:19,0:5:0.13:0,0,118	0/0:23,0:23:39.10:0,39,1343	0/0:18,0:18:22.25:0,22,778	0/0:16,0:16:33.09:0,33,696	0/1:25,0:23:99:302,0,975	1/1:2,17:19:24.08:1295,24,0	0/1:15,0:14:99:152,0,994	0/1:20,0:20:99:104,0,777	0/1:24,0:24:86.09:86,0,2047	0/1:24,0:23:84.83:85,0,2108	0/1:22,0:22:99:129,0,863	0/0:20,0:20:4.26:0,4,174	0/1:15,0:14:99:124,0,1166	0/1:20,0:20:7.38:7,0,2075	0/0:20,0:20:14.47:0,14,1601	0/1:14,0:14:81.77:101,0,82	0/1:25,0:24:37.40:105,0,37	0/1:23,0:18:76.93:95,0,77	0/1:20,0:20:99:134,0,1409	0/1:24,0:23:75.52:76,0,1670	0/1:18,0:17:12.30:12,0,1306	0/0:22,0:22:33.80:0,34,1240	0/1:21,0:21:99:145,0,1836	0/1:21,0:21:99:157,0,1542	0/0:12,0:11:21.07:0,21,881
chr10	9560622	.	CACACACACACACACAG	C	3013.18	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=-7.080;DP=559;FS=17.780;HRun=0;HaplotypeScore=255.4196;InbreedingCoeff=-0.0253;MQ=54.85;MQ0=20;MQRankSum=1.580;QD=8.81;ReadPosRankSum=-7.161;VQSLOD=-0.2356;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:33:8.13:0,8,221	0/1:10,0:10:5.36:5,0,490	0/0:17,0:11:29.89:0,30,295	0/0:18,0:5:4.67:0,5,71	0/0:24,0:24:24.32:0,24,850	0/0:17,0:17:22.29:0,22,502	0/0:17,0:17:32.96:0,33,375	0/1:26,0:24:99:174,0,757	1/1:17,0:18:24.08:889,24,0	0/1:15,0:14:86.66:87,0,743	0/1:21,0:21:86.68:87,0,546	0/1:24,0:24:23.79:24,0,1628	0/1:24,0:23:15.80:16,0,1625	0/1:21,0:21:59.02:59,0,570	0/0:21,0:21:3.90:0,4,139	0/1:15,0:14:55.61:56,0,995	0/1:21,0:21:6.55:7,0,1630	0/0:20,0:20:14.61:0,15,1314	1/1:3,12:15:18.44:587,18,0	1/1:2,23:24:12.04:441,12,0	1/1:22,0:17:38.66:482,39,0	0/1:19,0:19:71.12:71,0,1158	0/1:23,0:22:35.70:36,0,1374	0/0:16,0:15:6.63:0,7,1064	0/0:21,0:21:34.03:0,34,819	0/1:21,0:21:89.05:89,0,1418	0/1:22,0:22:80.73:81,0,1215	0/0:12,0:11:17.87:0,18,644
chr10	9560636	.	CAGAG	C	9095.82	PASS	AB=0.987;AC=37;AF=0.661;AN=56;BaseQRankSum=-8.935;DP=565;FS=38.548;HRun=0;HaplotypeScore=146.9394;InbreedingCoeff=0.6362;MQ=64.61;MQ0=15;MQRankSum=-2.260;QD=22.85;ReadPosRankSum=2.572;VQSLOD=2.8856;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:29:4.25:0,4,13	1/1:7,0:7:1.81:90,2,0	0/0:23,0:18:53.37:0,53,854	0/0:21,0:11:12.30:0,12,426	0/0:21,0:21:42.11:0,42,611	0/0:18,0:18:21.05:0,21,328	0/0:14,0:14:30.10:0,30,493	1/1:8,23:30:58.44:964,58,0	1/1:18,0:18:24.07:302,24,0	1/1:17,0:17:30.27:551,30,0	1/1:19,0:20:31.70:566,32,0	1/1:19,0:20:2.31:416,2,0	1/1:27,0:27:28.61:802,29,0	1/1:17,0:17:38.11:617,38,0	1/1:3,16:19:3.01:55,3,0	1/1:11,1:11:3.20:249,3,0	1/1:23,0:23:34.78:675,35,0	0/1:23,0:24:3.36:400,0,3	1/1:14,0:14:5.16:39,5,0	0/1:24,0:23:9.08:34,0,9	0/0:18,0:14:0.70:0,1,2	1/1:15,0:17:25.86:461,26,0	1/1:25,0:26:20.48:549,20,0	0/1:16,0:15:1.32:283,0,1	0/0:22,0:22:32.92:0,33,516	1/1:23,0:23:38.61:837,39,0	1/1:23,0:25:50.05:838,50,0	1/1:16,0:15:17.61:365,18,0
chr10	9562591	.	GACCAGCAATAAGAGTACCCCACATACCACACCC	G	16686.81	PASS	AC=30;AF=0.556;AN=54;BaseQRankSum=12.248;DP=418;FS=60.171;HRun=0;HaplotypeScore=340.4768;InbreedingCoeff=0.8872;MQ=89.21;MQ0=0;MQRankSum=-11.811;QD=115.88;ReadPosRankSum=5.592;VQSLOD=2.2926;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:96.33:0,96,12446	1/1:1,2:3:6.02:519,6,0	0/0:14,0:14:39.13:0,39,2867	0/0:22,0:22:63.18:0,63,3926	0/0:11,0:11:33.11:0,33,4246	0/0:24,0:24:69.24:0,69,9143	0/0:25,0:25:72.22:0,72,7316	1/1:11,0:11:3.01:57,3,0	0/0:34,0:34:99:0,102,11947	1/1:3,7:10:21.04:1579,21,0	1/1:5,4:9:6.02:506,6,0	1/1:6,4:9:9.03:779,9,0	1/1:3,5:8:6.02:519,6,0	1/1:6,6:12:18.06:1557,18,0	0/0:27,0:27:81.28:0,81,9552	1/1:2,8:10:18.06:1557,18,0	1/1:4,7:11:18.06:1463,18,0	./.	0/0:13,0:13:36.11:0,36,3654	0/0:12,0:12:36.12:0,36,4587	0/0:34,0:34:99:0,99,12267	1/1:1,6:7:18.06:1553,18,0	1/1:2,9:11:27.09:2336,27,0	1/1:6,5:11:3.01:260,3,0	0/0:19,0:19:55.43:0,55,7180	1/1:7,7:14:21.07:1405,21,0	1/1:3,6:9:15.05:1298,15,0	1/1:1,7:8:15.05:1298,15,0
chr10	9562709	.	GT	G	2579.08	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=0.052;DP=351;FS=7.307;HRun=6;HaplotypeScore=58.8913;InbreedingCoeff=0.7631;MQ=66.56;MQ0=0;MQRankSum=2.483;QD=22.82;ReadPosRankSum=1.309;VQSLOD=2.6717;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,21:23:51.12:548,51,0	0/0:2,0:2:3.01:0,3,39	0/1:14,0:12:22.05:22,0,171	0/0:6,1:5:9.03:0,9,118	1/1:0,23:23:60.15:640,60,0	1/1:0,23:23:69.17:742,69,0	1/1:1,10:11:27.07:290,27,0	0/0:15,0:15:45.15:0,45,589	0/0:1,0:17:46:0,46,236	0/0:11,0:11:24.08:0,24,316	0/0:7,0:7:15.05:0,15,191	0/0:4,0:4:12.04:0,12,158	0/0:8,0:8:12.04:0,12,158	0/0:5,0:5:12.01:0,12,140	0/0:18,0:18:51.17:0,51,671	0/0:11,0:11:24.08:0,24,311	0/0:8,0:8:17.09:0,17,200	0/0:9,0:9:24.08:0,24,316	0/0:18,0:18:42.14:0,42,553	0/0:35,0:35:99:0,99,1268	0/0:10,0:10:24.08:0,24,315	0/0:9,0:9:21.07:0,21,276	0/0:7,0:7:15.05:0,15,191	0/0:4,0:4:3.01:0,3,39	1/1:3,16:19:48.12:513,48,0	0/0:20,0:20:54.13:0,54,690	0/0:9,0:9:18.06:0,18,230	0/0:4,0:4:6.02:0,6,71
chr10	9562722	.	C	CATAT	4395.39	PASS	AC=28;AF=0.538;AN=52;BaseQRankSum=4.108;DP=334;FS=1.708;HRun=0;HaplotypeScore=73.3781;InbreedingCoeff=0.8668;MQ=57.71;MQ0=0;MQRankSum=-6.710;QD=38.90;ReadPosRankSum=-2.714;VQSLOD=4.4783;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:33.11:0,33,578	1/1:0,1:2:6.02:127,6,0	0/0:7,0:4:3.01:0,3,30	0/0:7,0:4:2.60:0,3,10	0/0:28,0:28:78.25:0,78,1323	0/0:29,0:29:69.24:0,69,1192	0/0:11,0:11:27.04:0,27,387	1/1:15,3:18:30.57:607,31,0	0/0:16,0:16:45.15:0,45,753	1/1:3,3:7:18.06:388,18,0	1/1:3,2:5:6.02:139,6,0	1/1:5,1:6:13.58:197,14,0	1/1:3,1:4:6:93,6,0	1/1:1,4:5:12.04:277,12,0	0/0:20,0:20:51.16:0,51,852	1/1:6,1:7:12.02:220,12,0	1/1:6,3:9:12.04:215,12,0	1/1:8,1:9:15.01:201,15,0	0/0:17,0:17:41.17:0,41,683	0/0:34,0:34:86.27:0,86,1382	0/0:7,0:7:18.04:0,18,281	1/1:6,1:7:15.05:265,15,0	1/1:2,2:4:9.02:165,9,0	./.	0/0:19,0:19:48.16:0,48,824	1/1:8,13:21:57.18:1171,57,0	1/1:6,3:8:15.05:330,15,0	./.
chr10	9562733	.	G	GTA	2950.10	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=3.695;DP=332;FS=4.827;HRun=0;HaplotypeScore=64.9319;InbreedingCoeff=0.7857;MQ=60.22;MQ0=0;MQRankSum=-6.621;QD=22.52;ReadPosRankSum=-4.288;VQSLOD=2.5676;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:39.13:0,39,505	1/1:1,2:3:6.02:95,6,0	1/1:6,0:4:1.46:11,1,0	0/0:6,0:2:2.94:0,3,18	0/0:31,0:31:78.25:0,78,1014	0/0:25,0:25:66.18:0,66,826	0/0:12,0:12:24.06:0,24,297	1/1:2,18:21:54.13:784,54,0	0/0:15,0:15:39.07:0,39,487	1/1:2,5:7:18.05:265,18,0	1/1:5,2:7:9.03:135,9,0	1/1:6,1:7:9.03:144,9,0	1/1:7,1:8:15.02:189,15,0	1/1:0,4:4:12.04:176,12,0	0/0:18,0:18:42.14:0,42,546	1/1:3,1:4:7.57:85,8,0	1/1:2,8:10:8.06:95,8,0	1/1:6,3:9:6.02:93,6,0	0/0:18,0:18:45.13:0,45,560	0/0:33,0:33:84.26:0,84,1069	0/0:7,0:7:15.05:0,15,195	1/1:6,1:7:3.01:45,3,0	1/1:3,3:6:9.03:125,9,0	1/1:1,0:1:3.01:46,3,0	0/0:19,0:19:51.14:0,51,647	1/1:7,13:20:42.14:645,42,0	1/1:4,5:8:12.04:182,12,0	1/1:1,0:1:3.01:42,3,0
chr10	9564190	.	C	CAT	1437.52	PASS	AB=0.947;AC=20;AF=0.385;AN=52;BaseQRankSum=1.052;DP=345;FS=0.000;HRun=0;HaplotypeScore=124.2956;InbreedingCoeff=0.1175;MQ=47.31;MQ0=11;MQRankSum=-2.239;QD=7.86;ReadPosRankSum=3.945;VQSLOD=3.3979;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:4.91:0,5,58	1/1:4,0:4:2.97:20,3,0	0/0:23,0:9:24.02:0,24,253	0/0:21,0:8:20.53:0,21,164	0/1:10,0:9:4.20:4,0,24	0/0:16,0:15:17.85:0,18,134	0/0:18,0:18:23.80:0,24,175	1/1:21,0:18:17.51:384,18,0	0/0:8,0:8:11.75:0,12,81	0/1:17,1:17:7.42:194,0,7	0/0:7,1:7:0.31:0,0,1	1/1:3,1:4:6:79,6,0	1/1:6,1:7:11.92:118,12,0	0/0:10,0:10:0.74:0,1,21	0/1:13,0:13:21.70:22,0,113	0/1:8,3:11:11.93:147,0,12	0/1:14,1:15:20.15:67,0,20	0/1:5,0:4:26.41:31,0,26	0/0:17,0:16:43.43:0,43,286	0/0:7,0:7:5.96:0,6,44	0/0:12,0:12:11.88:0,12,94	./.	./.	1/1:9,1:9:5.43:34,5,0	0/1:17,0:17:14.85:15,0,60	0/1:17,2:17:1.68:355,0,2	0/1:23,3:24:33.53:119,0,34	0/1:3,0:3:6.81:7,0,18
chr10	9564226	.	C	CAT	3832.45	PASS	AB=0.905;AC=23;AF=0.426;AN=54;BaseQRankSum=3.820;DP=365;FS=56.013;HRun=0;HaplotypeScore=108.4263;InbreedingCoeff=0.1649;MQ=51.88;MQ0=17;MQRankSum=-5.218;QD=20.07;ReadPosRankSum=1.151;VQSLOD=1.6407;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:31.28:0,31,453	./.	0/0:30,0:20:50.98:0,51,670	0/0:22,0:10:21.07:0,21,310	0/0:16,0:15:19.97:0,20,305	0/0:20,0:19:45.08:0,45,547	0/0:19,0:19:39:0,39,522	0/1:20,1:19:5.72:467,0,6	0/1:7,0:7:14:34,0,14	1/1:16,2:16:42.05:535,42,0	0/1:10,3:12:13.29:264,0,13	0/1:4,1:5:7.95:160,0,8	0/1:7,0:7:20.92:138,0,21	0/1:9,2:10:17.11:158,0,17	0/1:13,0:12:30.64:136,0,31	1/1:8,2:10:21.30:298,21,0	1/1:8,7:15:33.03:450,33,0	1/1:2,1:2:6.01:67,6,0	0/0:11,0:9:26.80:0,27,279	0/0:14,0:14:36.06:0,36,495	0/0:12,0:11:23.88:0,24,311	1/1:1,1:2:3.01:45,3,0	1/1:7,3:10:12.03:159,12,0	0/1:8,2:9:12.10:100,0,12	0/0:12,0:12:8.62:0,9,235	0/1:14,3:16:37.39:273,0,37	0/1:19,5:23:7.86:458,0,8	0/1:5,0:4:14.77:90,0,15
chr10	9564238	.	T	TA	4331.88	PASS	AB=0.696;AC=41;AF=0.732;AN=56;BaseQRankSum=0.107;DP=384;FS=8.834;HRun=11;HaplotypeScore=89.8850;InbreedingCoeff=0.6402;MQ=59.87;MQ0=2;MQRankSum=-5.398;QD=15.53;ReadPosRankSum=-2.950;VQSLOD=3.9489;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:32.79:0,33,255	1/1:1,0:1:0.89:2,1,0	0/0:24,2:22:18.72:0,19,252	0/0:19,0:13:20.62:0,21,159	0/0:16,0:16:32.02:0,32,244	0/0:16,0:16:34.82:0,35,261	0/1:16,3:19:22.22:22,0,213	1/1:9,15:22:42.48:396,42,0	1/1:2,14:16:30.02:294,30,0	1/1:7,12:19:39.54:393,40,0	1/1:5,9:17:35.54:307,36,0	1/1:2,5:7:15.03:151,15,0	1/1:0,11:11:21.04:213,21,0	1/1:6,9:15:10.19:250,10,0	1/1:7,6:12:24.48:233,24,0	1/1:4,9:13:3.74:199,4,0	1/1:6,9:15:21.04:213,21,0	1/1:1,3:5:14.96:133,15,0	1/1:2,4:8:17.82:155,18,0	1/1:7,7:15:6.66:222,7,0	1/1:1,9:11:21.35:197,21,0	1/1:1,5:6:6.01:61,6,0	1/1:2,8:11:3.66:204,4,0	1/1:3,7:11:18.34:167,18,0	0/0:10,0:11:16.85:0,17,122	1/1:5,5:10:12.02:122,12,0	0/1:11,12:24:7.11:264,0,7	0/1:2,5:7:5.20:134,0,5
chr10	9565822	.	TTCCGTTCATAGGTTACATGCACCAC	T	30750.93	PASS	AC=30;AF=0.556;AN=54;BaseQRankSum=17.828;DP=562;FS=3.543;HRun=0;HaplotypeScore=408.4452;InbreedingCoeff=0.9713;MQ=95.64;MQ0=0;MQRankSum=-16.599;QD=162.70;ReadPosRankSum=5.693;VQSLOD=3.9110;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,120,12274	1/1:0,4:4:9.03:629,9,0	0/0:34,0:34:99:0,102,6943	0/0:26,0:26:77.48:0,77,4937	0/0:23,0:23:69.24:0,69,7214	0/0:21,0:21:60.21:0,60,6447	0/0:37,0:37:99:0,111,9904	1/1:0,7:7:21.06:1119,21,0	0/0:34,0:34:99:0,102,10036	1/1:0,12:11:33.09:1819,33,0	1/1:0,8:8:15.05:1014,15,0	1/1:0,25:25:66.23:4500,66,0	1/1:0,13:13:33.11:2305,33,0	1/1:0,21:21:57.20:3802,57,0	0/0:45,0:45:99:0,135,14869	1/1:0,18:18:51.18:3538,51,0	1/1:0,14:14:27.09:1846,27,0	1/1:0,4:4:12.04:838,12,0	0/0:19,0:19:57.20:0,57,5029	0/0:33,0:33:99:0,99,9185	0/0:41,0:41:99:0,117,12358	1/1:0,12:12:36.12:2319,36,0	1/1:0,7:7:9.03:617,9,0	1/1:0,7:7:11.83:695,12,0	0/0:20,0:20:60.18:0,60,6720	1/1:0,11:11:33.09:2025,33,0	1/1:0,26:26:54.19:3685,54,0	./.
chr10	9566104	.	A	AACACACAC	4478	PASS	AB=0.833;AC=50;AF=0.893;AN=56;BaseQRankSum=-1.116;DP=724;FS=1.743;HRun=0;HaplotypeScore=204.5064;InbreedingCoeff=0.4029;MQ=42.24;MQ0=20;MQRankSum=0.062;QD=6.87;ReadPosRankSum=0.316;VQSLOD=4.0085;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:38,5:42:29.13:479,29,0	1/1:9,0:9:2.88:15,3,0	0/0:55,0:14:8.99:0,9,162	0/1:60,0:18:20.24:20,0,137	1/1:28,4:34:11.86:163,12,0	1/1:17,2:19:12.04:218,12,0	1/1:31,2:33:22.04:372,22,0	1/1:26,0:26:8.89:59,9,0	0/0:17,0:17:3.90:0,4,58	1/1:25,0:25:22.99:191,23,0	1/1:12,0:11:3.01:51,3,0	1/1:31,0:31:14.78:181,15,0	1/1:20,0:20:21.26:453,21,0	1/1:33,0:32:12.09:132,12,0	1/1:19,9:34:18.44:232,18,0	1/1:12,0:12:8.82:155,9,0	1/1:26,0:25:14.82:306,15,0	1/1:17,0:17:12.79:245,13,0	1/1:16,0:16:18.90:223,19,0	0/1:11,1:22:0:0,0,0	1/1:23,0:37:3.42:27,3,0	1/1:21,0:21:9.21:61,9,0	1/1:19,0:19:11.18:133,11,0	1/1:24,0:24:6.16:35,6,0	1/1:24,1:25:18.05:252,18,0	1/1:27,0:26:18.85:170,19,0	1/1:20,0:19:9.03:289,9,0	1/1:4,0:4:3.73:17,4,0
chr10	9566122	.	CA	C	1337.26	PASS	AB=0.825;AC=16;AF=0.286;AN=56;BaseQRankSum=5.502;DP=669;FS=4.493;HRun=1;HaplotypeScore=158.9512;InbreedingCoeff=-0.3012;MQ=46.57;MQ0=9;MQRankSum=-5.170;QD=4.66;ReadPosRankSum=0.885;VQSLOD=0.4651;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:47:55.49:0,55,701	0/1:6,1:7:31.16:31,0,77	0/0:42,0:11:30.10:0,30,428	0/0:42,0:17:45.14:0,45,587	0/0:38,0:38:32.68:0,33,393	0/0:16,0:16:15.04:0,15,196	0/0:31,0:30:39.58:0,40,508	0/1:19,3:22:82.57:83,0,726	0/0:14,0:14:15.02:0,15,163	0/1:20,5:25:62.87:63,0,698	0/0:8,2:9:3.01:0,3,44	0/1:18,7:25:99:201,0,178	0/1:16,6:22:99:137,0,191	1/1:22,3:24:0.97:202,1,0	0/0:34,0:34:45.13:0,45,584	0/1:11,1:12:33.89:65,0,34	0/1:22,5:26:99:138,0,292	0/1:15,1:16:99:109,0,292	0/0:17,0:17:46.69:0,47,581	0/0:25,0:25:20.27:0,20,223	0/0:39,0:39:30.10:0,30,404	0/1:9,5:14:24.72:25,0,162	0/1:12,3:15:49.53:50,0,114	0/1:21,4:25:52.12:52,0,148	0/0:26,0:26:24.07:0,24,315	0/1:20,8:27:99:168,0,705	0/1:12,5:16:99:118,0,215	0/1:4,3:7:41.66:53,0,42
chr10	9566123	.	A	ACACACACAC	15704.46	PASS	AB=1.000;AC=40;AF=0.714;AN=56;BaseQRankSum=-1.775;DP=671;FS=14.904;HRun=0;HaplotypeScore=260.5228;InbreedingCoeff=0.2595;MQ=46.51;MQ0=8;MQRankSum=-6.615;QD=29.24;ReadPosRankSum=2.196;VQSLOD=3.0819;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:48,0:47:99:352,0,312	1/1:7,0:7:18.06:649,18,0	0/0:40,0:11:27.09:0,27,443	0/0:42,0:17:38.65:0,39,554	0/1:37,0:37:44.01:44,0,148	0/1:16,0:16:28.63:299,0,29	0/1:31,0:30:99:427,0,154	1/1:21,0:22:48.07:1417,48,0	0/0:13,0:13:12.01:0,12,163	1/1:24,0:25:54.15:1540,54,0	1/1:12,0:11:2.10:90,2,0	1/1:22,3:25:44.99:1031,45,0	1/1:18,5:23:45.14:1278,45,0	1/1:21,1:25:39.72:844,40,0	0/1:34,0:34:99:180,0,272	1/1:10,2:12:27.08:610,27,0	1/1:24,3:27:51.13:1506,51,0	1/1:12,1:15:29.39:834,29,0	0/1:18,0:18:99:202,0,246	0/1:25,0:25:80.84:81,0,195	0/0:39,0:39:34.51:0,35,348	1/1:14,0:14:21.04:340,21,0	1/1:12,2:15:14.12:277,14,0	1/1:21,3:25:20.47:504,20,0	0/1:26,0:26:64.04:153,0,64	1/1:29,0:28:57.65:1799,58,0	1/1:12,3:16:36.12:1068,36,0	1/1:6,0:7:9.49:179,9,0
chr10	9566126	.	CACAGA	C	54.45	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=1.233;DP=667;FS=2.633;HRun=0;HaplotypeScore=188.8264;InbreedingCoeff=0.6027;MQ=48.86;MQ0=6;MQRankSum=-1.398;QD=4.95;ReadPosRankSum=-0.383;VQSLOD=2.7307;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:47:56.53:0,57,695	0/0:7,0:7:6.02:0,6,78	0/0:40,0:13:39.13:0,39,872	0/0:33,0:14:37.37:0,37,778	0/0:38,0:38:30.04:0,30,396	0/0:17,0:17:14.97:0,15,160	0/0:33,0:32:42.53:0,43,632	0/0:23,0:23:61.43:0,61,1076	1/1:1,10:11:6.02:135,6,0	0/0:23,0:23:57.08:0,57,907	0/0:12,0:11:6.02:0,6,89	0/0:25,0:25:35.09:0,35,370	0/0:22,0:23:38.80:0,39,572	0/0:27,0:26:25.72:0,26,302	0/0:34,0:34:51.17:0,51,1008	0/0:12,0:12:14.91:0,15,189	0/0:28,0:27:50.72:0,51,677	0/0:14,0:14:35.89:0,36,442	0/0:20,0:20:52.06:0,52,1094	0/0:25,0:25:19.79:0,20,396	0/0:40,0:40:36.50:0,37,786	0/0:13,0:13:15.31:0,15,212	0/0:15,0:15:12.03:0,12,156	0/0:25,0:25:16.24:0,16,204	0/0:26,0:26:24.01:0,24,306	0/0:31,0:30:74.13:0,74,1102	0/0:17,0:16:36.79:0,37,473	0/0:6,0:6:6.47:0,6,83
chr10	9566132	.	GGT	G	2925.22	PASS	AB=0.875;AC=43;AF=0.768;AN=56;BaseQRankSum=6.469;DP=512;FS=7.479;HRun=0;HaplotypeScore=117.1493;InbreedingCoeff=0.8024;MQ=66.27;MQ0=5;MQRankSum=-5.596;QD=8.50;ReadPosRankSum=1.751;VQSLOD=2.5780;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,17:31:39.74:613,40,0	1/1:6,1:7:5.87:65,6,0	0/0:36,0:18:41.56:0,42,690	0/0:25,0:18:47.64:0,48,649	1/1:2,27:29:41.33:450,41,0	1/1:0,13:13:18.01:222,18,0	1/1:4,16:19:35.46:471,35,0	1/1:11,1:12:19.23:110,19,0	1/1:13,0:13:10.78:55,11,0	1/1:16,0:14:16.94:94,17,0	1/1:9,0:9:4.99:17,5,0	1/1:17,0:17:19.60:76,20,0	1/1:16,0:16:22.35:74,22,0	1/1:16,1:17:23.67:98,24,0	0/0:30,0:30:16.36:0,16,108	1/1:8,0:8:15.57:67,16,0	1/1:17,0:17:21.79:75,22,0	1/1:10,0:10:17.18:68,17,0	0/0:20,0:20:51.16:0,51,857	0/0:21,0:21:45.11:0,45,712	0/0:35,0:35:42.06:0,42,665	1/1:14,0:14:4.74:16,5,0	1/1:14,1:15:1.60:17,2,0	0/1:12,2:14:2.71:3,0,8	1/1:2,19:21:18.06:264,18,0	1/1:19,0:19:25.72:126,26,0	1/1:15,1:16:24.24:116,24,0	1/1:9,0:9:4.99:17,5,0
chr10	9566133	.	GT	G	5267.06	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=5.201;DP=505;FS=2.874;HRun=1;HaplotypeScore=103.7506;InbreedingCoeff=0.8828;MQ=66.68;MQ0=5;MQRankSum=-5.885;QD=14.43;ReadPosRankSum=0.301;VQSLOD=4.4107;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:33,0:32:48.22:333,48,0	1/1:1,6:7:5.88:39,6,0	0/0:35,0:18:50.92:0,51,584	0/0:27,0:19:51.03:0,51,594	1/1:27,0:27:40.91:268,41,0	1/1:13,0:13:16.64:94,17,0	1/1:18,2:19:32.18:224,32,0	1/1:8,5:13:27.93:287,28,0	1/1:12,1:13:23.91:202,24,0	1/1:2,13:13:26.91:256,27,0	1/1:1,8:9:6.02:84,6,0	1/1:3,14:17:24:308,24,0	1/1:0,16:16:28.34:370,28,0	1/1:2,14:16:29.95:355,30,0	1/1:29,0:29:20.56:143,21,0	1/1:3,5:8:21.93:260,22,0	1/1:1,14:15:33.02:411,33,0	1/1:0,10:10:21.02:267,21,0	0/0:20,0:20:51.11:0,51,683	0/0:20,0:20:43:0,43,550	0/0:37,0:37:45.04:0,45,570	1/1:0,14:14:6.02:82,6,0	1/1:10,4:14:17.91:191,18,0	1/1:4,10:14:7.90:93,8,0	1/1:19,0:19:17.61:108,18,0	1/1:1,17:18:38.94:426,39,0	1/1:2,14:16:30.04:382,30,0	1/1:1,8:9:6.02:83,6,0
chr10	9566889	.	A	AT	6112.20	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=-4.550;DP=379;FS=7.581;HRun=8;HaplotypeScore=43.2084;InbreedingCoeff=0.9642;MQ=60.71;MQ0=0;MQRankSum=1.335;QD=28.83;ReadPosRankSum=1.439;VQSLOD=5.0367;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:75.04:0,75,686	1/1:1,3:4:12.03:132,12,0	0/0:13,0:10:15:0,15,135	0/0:6,0:7:19.89:0,20,157	0/0:12,0:12:30.02:0,30,274	0/0:16,0:16:42.02:0,42,384	0/0:11,0:11:27.01:0,27,247	1/1:7,22:29:69.19:785,69,0	0/0:16,0:16:42.02:0,42,384	1/1:2,14:16:42.12:484,42,0	1/1:1,8:9:21.06:242,21,0	1/1:1,7:8:18.05:208,18,0	1/1:2,12:14:33.10:381,33,0	1/1:0,12:11:30.05:331,30,0	0/0:11,0:11:33.02:0,33,302	1/1:2,13:15:33.10:381,33,0	1/1:1,16:17:45.13:516,45,0	1/1:0,1:1:3.01:35,3,0	0/0:15,0:15:33.01:0,33,302	0/0:15,0:15:42.02:0,42,384	0/0:10,0:10:24.01:0,24,220	1/1:1,10:11:27.08:311,27,0	1/1:2,7:9:21.06:242,21,0	1/1:2,14:16:36.11:415,36,0	0/0:11,0:11:30.02:0,30,275	1/1:1,20:21:57.15:646,57,0	1/1:0,24:24:69.07:796,69,0	1/1:0,6:6:18.05:208,18,0
chr10	9568595	.	AG	A	1349.96	PASS	AB=0.816;AC=28;AF=0.875;AN=32;BaseQRankSum=1.693;DP=200;FS=0.000;HRun=1;HaplotypeScore=66.2622;InbreedingCoeff=-0.0193;MQ=14.70;MQ0=151;MQRankSum=-0.272;QD=11.74;ReadPosRankSum=1.526;VQSLOD=1.9248;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,4:4:11.99:129,12,0	./.	./.	./.	./.	1/1:5,2:2:3.89:36,4,0	1/1:0,2:2:6.02:83,6,0	1/1:7,7:6:18.06:251,18,0	1/1:0,2:2:6.02:83,6,0	./.	./.	1/1:4,4:4:12.04:160,12,0	1/1:2,3:3:9.02:104,9,0	1/1:4,1:1:3.01:36,3,0	1/1:2,3:3:9.01:108,9,0	./.	0/1:9,2:4:70.93:71,0,84	0/1:8,3:4:35.80:113,0,36	1/1:6,1:1:3.01:42,3,0	./.	1/1:9,2:2:3.01:36,3,0	./.	0/0:0,1:1:1.25:0,1,3	1/1:4,7:7:9.01:105,9,0	./.	1/1:1,2:2:6.02:84,6,0	./.	./.
chr10	9568606	.	G	GTA	233.35	PASS	AB=0.700;AC=12;AF=0.750;AN=16;BaseQRankSum=2.451;DP=145;FS=0.000;HRun=0;HaplotypeScore=67.7325;MQ=10.30;MQ0=130;MQRankSum=-2.282;QD=5.56;ReadPosRankSum=2.451;VQSLOD=2.1348;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,1:1:2.37:8,2,0	./.	./.	./.	./.	1/1:5,2:2:5.94:43,6,0	./.	./.	./.	./.	./.	1/1:4,3:3:9.03:123,9,0	./.	./.	1/1:2,2:2:5.99:62,6,0	./.	0/0:12,0:2:6.02:0,6,97	0/1:8,1:2:38:38,0,43	./.	./.	./.	./.	0/1:0,1:1:0:0,0,0	./.	./.	1/1:1,1:1:3.01:43,3,0	./.	./.
chr10	9568610	.	GCTCACA	G	386.46	PASS	AB=0.900;AC=13;AF=0.929;AN=14;BaseQRankSum=1.448;DP=138;FS=0.000;HRun=0;HaplotypeScore=75.6273;MQ=8.90;MQ0=125;MQRankSum=0.000;QD=8.99;ReadPosRankSum=1.448;VQSLOD=1.2672;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:11,1:1:3.01:30,3,0	./.	./.	./.	./.	1/1:6,2:2:6.02:71,6,0	./.	./.	./.	./.	./.	1/1:4,3:3:9.03:161,9,0	./.	./.	1/1:2,2:2:6.02:88,6,0	./.	./.	0/1:8,1:2:46.94:47,0,104	./.	./.	./.	./.	1/1:0,1:1:2.68:11,3,0	./.	./.	1/1:1,1:1:3.01:54,3,0	./.	./.
chr10	9568622	.	CCA	C	267.53	PASS	AC=14;AF=1.000;AN=14;DP=119;FS=0.000;HRun=0;HaplotypeScore=72.6260;MQ=9.21;MQ0=107;QD=5.95;VQSLOD=1.9955;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:14,1:1:2.60:10,3,0	./.	./.	./.	./.	1/1:6,2:2:5.94:45,6,0	./.	./.	./.	./.	./.	1/1:4,3:3:9.03:129,9,0	./.	./.	1/1:2,2:2:6:66,6,0	./.	./.	1/1:7,1:1:3.01:42,3,0	./.	./.	./.	./.	1/1:0,1:1:0.89:2,1,0	./.	./.	1/1:1,1:1:3.01:43,3,0	./.	./.
chr10	9568680	.	ATAAGT	A	2302.66	PASS	AC=30;AF=1.000;AN=30;DP=145;FS=0.000;HRun=0;HaplotypeScore=98.0443;InbreedingCoeff=-0.0716;MQ=17.46;MQ0=91;QD=21.13;VQSLOD=2.7104;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,3:3:9.03:140,9,0	./.	./.	./.	./.	1/1:5,5:5:15.05:232,15,0	1/1:5,3:3:9.03:138,9,0	1/1:11,1:2:5.81:63,6,0	1/1:1,3:3:9.03:139,9,0	1/1:1,2:2:6.02:100,6,0	./.	1/1:0,3:3:9.03:140,9,0	1/1:1,2:2:6.02:94,6,0	1/1:2,2:2:6.02:93,6,0	1/1:1,2:2:6.02:91,6,0	1/1:3,8:8:24.08:371,24,0	./.	1/1:6,2:2:6.02:98,6,0	1/1:7,1:2:5.89:66,6,0	./.	./.	./.	./.	./.	./.	1/1:1,3:3:9.03:148,9,0	1/1:3,10:10:30.10:464,30,0	./.
chr10	9568686	.	A	AC	1030.77	PASS	AB=0.906;AC=28;AF=0.933;AN=30;BaseQRankSum=1.642;DP=139;FS=0.000;HRun=0;HaplotypeScore=97.9820;InbreedingCoeff=-0.1219;MQ=17.83;MQ0=85;MQRankSum=0.928;QD=9.82;ReadPosRankSum=2.355;VQSLOD=3.8147;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,3:3:8.95:67,9,0	./.	./.	./.	./.	1/1:5,5:5:14.91:111,15,0	1/1:5,3:3:8.95:66,9,0	0/1:11,1:2:16.80:19,0,17	1/1:1,3:3:8.95:66,9,0	1/1:1,2:2:6:52,6,0	./.	1/1:0,3:3:8.95:67,9,0	1/1:1,2:2:5.97:45,6,0	1/1:1,2:2:5.97:44,6,0	1/1:1,2:2:5.95:42,6,0	1/1:2,8:8:23.85:177,24,0	./.	1/1:5,2:2:5.99:49,6,0	0/1:7,1:2:14.82:20,0,15	./.	./.	./.	./.	./.	./.	1/1:1,3:3:8.99:75,9,0	1/1:3,10:10:29.80:221,30,0	./.
chr10	9568911	.	TA	T	1011.89	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=1.917;DP=391;FS=3.532;HRun=7;HaplotypeScore=55.0892;InbreedingCoeff=0.9538;MQ=63.77;MQ0=0;MQRankSum=-0.738;QD=22.49;ReadPosRankSum=0.699;VQSLOD=3.3032;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:48.03:0,48,547	0/0:9,0:9:24.08:0,24,300	0/0:12,0:12:27.04:0,27,312	0/0:6,0:5:7.40:0,7,127	0/0:17,0:17:33.11:0,33,413	0/0:20,0:20:57.13:0,57,682	0/0:15,0:15:33.11:0,33,414	0/0:20,0:20:57.12:0,57,675	0/0:20,0:20:60.19:0,60,751	0/0:18,0:18:51.13:0,51,624	0/0:12,0:12:33.10:0,33,403	0/0:15,0:15:36.04:0,36,416	0/0:16,0:16:39.08:0,39,469	0/0:15,0:15:42.13:0,42,526	0/0:18,0:18:54.13:0,54,659	0/0:10,0:10:30.10:0,30,377	0/0:16,0:16:36.07:0,36,435	0/0:7,0:7:18.04:0,18,213	1/1:4,15:19:42.05:420,42,0	1/1:0,19:19:51.11:520,51,0	1/1:0,7:7:21.05:214,21,0	0/0:11,0:11:33.06:0,33,394	0/0:11,0:11:30.01:0,30,340	0/0:14,0:14:30.05:0,30,359	0/0:18,0:18:48.15:0,48,601	0/0:9,0:9:21.07:0,21,264	0/0:15,0:13:45.13:0,45,547	0/0:4,0:4:12:0,12,134
chr10	9569744	.	T	TTTGA	35155.68	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-2.008;DP=608;FS=29.670;HRun=0;HaplotypeScore=105.2529;InbreedingCoeff=0.7544;MQ=60.54;MQ0=1;MQRankSum=-6.954;QD=61.14;ReadPosRankSum=3.189;VQSLOD=3.8113;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,22:27:51.17:1291,51,0	1/1:0,10:10:24.08:562,24,0	0/0:17,0:14:0.25:0,0,384	0/0:16,0:13:25.61:0,26,442	1/1:1,35:37:96.32:2308,96,0	1/1:2,22:25:51.17:1302,51,0	1/1:3,20:24:51.17:1231,51,0	1/1:2,26:33:93.28:2175,93,0	1/1:1,14:15:36.12:948,36,0	1/1:5,20:26:75.16:1751,75,0	1/1:2,17:19:54.18:1278,54,0	1/1:0,19:20:42.14:1100,42,0	1/1:1,20:22:48.16:1263,48,0	1/1:3,18:24:63.22:1580,63,0	1/1:2,24:26:75.26:1927,75,0	1/1:2,15:17:39.13:997,39,0	1/1:2,23:26:63.22:1632,63,0	1/1:3,2:4:6.02:126,6,0	1/1:1,16:18:54.19:1369,54,0	1/1:2,32:37:93.27:2306,93,0	1/1:1,9:10:27.09:700,27,0	1/1:2,26:30:72.24:1771,72,0	1/1:4,20:24:54.18:1316,54,0	1/1:1,12:13:36.12:925,36,0	1/1:3,26:29:69.23:1762,69,0	1/1:2,18:22:60.20:1473,60,0	1/1:2,25:28:75.26:1929,75,0	1/1:1,7:8:6.02:134,6,0
chr10	9589852	.	CAG	C	207.47	PASS	AB=0.927;AC=7;AF=0.125;AN=56;BaseQRankSum=2.042;DP=449;FS=3.975;HRun=0;HaplotypeScore=95.8498;InbreedingCoeff=0.2060;MQ=69.74;MQ0=10;MQRankSum=-0.010;QD=3.35;ReadPosRankSum=1.554;VQSLOD=2.0701;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:5:6.42:0,6,44	0/0:4,0:4:3.01:0,3,48	0/0:48,0:24:31.76:0,32,440	0/0:69,0:33:20.61:0,21,304	0/0:19,0:18:0.47:0,0,1	0/0:13,0:13:5.94:0,6,42	0/0:9,0:9:2.99:0,3,24	0/0:20,0:19:42.06:0,42,642	0/0:7,0:7:6.02:0,6,91	0/0:29,0:29:66.11:0,66,928	0/0:20,0:20:6.01:0,6,69	0/0:13,0:13:14.61:0,15,240	0/0:18,0:18:12.04:0,12,187	0/0:14,0:14:2.85:0,3,42	0/0:12,0:12:3.01:0,3,44	0/1:13,1:14:12.96:13,0,13	0/0:11,0:11:6.01:0,6,74	0/0:8,0:8:18.06:0,18,282	1/1:10,5:13:5.47:203,5,0	0/0:3,4:7:3.01:0,3,48	1/1:3,5:8:6.02:73,6,0	0/0:9,1:10:11.78:0,12,189	0/0:18,0:17:21.04:0,21,298	0/1:9,1:10:24.56:25,0,128	0/0:8,0:8:2.96:0,3,19	0/0:18,1:19:11.82:0,12,657	0/1:14,1:15:15.31:15,0,248	0/0:5,0:5:15.05:0,15,229
chr10	9591304	.	TA	T	6099.74	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=8.329;DP=772;FS=9.020;HRun=2;HaplotypeScore=123.3505;InbreedingCoeff=1.0000;MQ=85.45;MQ0=0;MQRankSum=-3.289;QD=35.46;ReadPosRankSum=3.355;VQSLOD=3.7674;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,42:43:99:1620,126,0	0/0:12,0:12:36.12:0,36,537	0/0:21,0:21:60.19:0,60,876	0/0:31,0:30:73.60:0,74,1069	1/1:1,29:30:75.24:974,75,0	1/1:0,40:40:99:1441,111,0	1/1:0,33:33:96.31:1247,96,0	0/0:29,0:29:84.28:0,84,1259	0/0:23,0:23:69.23:0,69,1034	0/0:35,0:35:99:0,105,1557	0/0:33,0:33:96.32:0,96,1421	0/0:24,0:24:69.23:0,69,1032	0/0:28,0:28:81.26:0,81,1194	0/0:28,0:28:84.28:0,84,1259	0/0:22,0:22:63.19:0,63,906	0/0:26,0:26:75.25:0,75,1124	0/0:23,0:23:69.20:0,69,992	0/0:24,0:24:69.19:0,69,1009	0/0:26,0:26:75.25:0,75,1123	0/0:21,0:21:63.20:0,63,924	0/0:33,0:33:99:0,99,1484	0/0:28,0:28:81.27:0,81,1213	0/0:32,0:32:96.33:0,96,1439	0/0:28,0:28:81.75:0,82,1213	1/1:1,25:26:63.20:818,63,0	0/0:36,0:36:99:0,99,1466	0/0:24,0:24:69.23:0,69,1034	0/0:13,0:13:39.13:0,39,585
chr10	9592791	.	GTTATAAATA	G	2584.08	PASS	AB=0.583;AC=5;AF=0.089;AN=56;BaseQRankSum=8.625;DP=643;FS=7.383;HRun=0;HaplotypeScore=189.7468;InbreedingCoeff=0.7664;MQ=95.83;MQ0=1;MQRankSum=-8.926;QD=73.83;ReadPosRankSum=0.189;VQSLOD=2.9623;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,120,5505	0/0:5,0:5:15.05:0,15,760	0/0:26,0:26:78.24:0,78,3202	0/0:35,0:36:95.96:0,96,4089	0/0:25,0:25:75.26:0,75,3582	0/0:29,0:29:87.30:0,87,4119	0/0:17,0:17:51.18:0,51,2501	0/0:23,0:23:69.23:0,69,3125	0/0:24,0:24:72.25:0,72,3467	0/0:28,0:28:84.29:0,84,4028	0/0:23,0:23:69.23:0,69,3355	0/0:24,0:24:72.25:0,72,3567	0/0:25,0:25:75.26:0,75,3385	0/0:29,0:29:87.30:0,87,4105	0/0:28,0:28:84.29:0,84,3974	0/0:33,0:33:99:0,99,4758	0/0:25,0:25:75.25:0,75,3228	0/0:30,0:29:84.29:0,84,3814	0/1:2,5:7:70.23:471,0,70	1/1:0,19:19:54.19:1754,54,0	1/1:1,8:8:15.05:486,15,0	0/0:18,0:18:54.19:0,54,2658	0/0:15,0:15:45.15:0,45,2272	0/0:29,0:29:87.30:0,87,4245	0/0:14,0:14:42.14:0,42,2053	0/0:31,0:31:93.32:0,93,4600	0/0:22,0:22:66.23:0,66,3218	0/0:8,0:8:24.08:0,24,1196
chr10	9593566	.	C	CA	3025.38	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=5.848;DP=672;FS=6.959;HRun=0;HaplotypeScore=272.9961;InbreedingCoeff=0.9953;MQ=63.48;MQ0=0;MQRankSum=-5.353;QD=26.54;ReadPosRankSum=1.504;VQSLOD=2.3850;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,32:32:45.15:698,45,0	0/0:12,0:12:27.08:0,27,377	0/0:24,0:23:66.18:0,66,822	0/0:16,0:16:33.88:0,34,528	1/1:0,14:14:25.13:346,25,0	1/1:0,20:20:39.13:619,39,0	1/1:0,21:21:42.14:668,42,0	0/0:37,0:37:99:0,105,1423	0/0:27,0:27:78.26:0,78,1090	0/0:24,0:24:72.23:0,72,997	0/0:24,0:24:57.10:0,57,773	0/0:33,0:33:93.25:0,93,1243	0/0:37,0:37:99:0,105,1417	0/0:27,0:27:72.02:0,72,950	0/0:41,0:40:98.94:0,99,1185	0/0:24,0:24:63.08:0,63,837	0/0:18,0:18:44.96:0,45,522	0/0:13,0:13:27.09:0,27,377	0/0:14,0:14:42.13:0,42,568	0/0:22,0:22:36.07:0,36,472	0/0:27,0:27:35.81:0,36,451	0/0:31,0:31:63.15:0,63,863	0/0:17,0:17:32.57:0,33,351	0/0:30,0:30:46.68:0,47,584	1/1:0,27:27:57.19:870,57,0	0/0:23,0:23:69.20:0,69,954	0/0:30,0:30:72:0,72,891	0/0:7,0:7:15.05:0,15,210
chr10	9593578	.	C	CACAACAACAACAAA	73861.18	PASS	AB=0.956;AC=44;AF=0.786;AN=56;BaseQRankSum=-3.477;DP=734;FS=14.911;HRun=0;HaplotypeScore=314.7880;InbreedingCoeff=0.3308;MQ=59.32;MQ0=0;MQRankSum=-8.848;QD=111.57;ReadPosRankSum=0.652;VQSLOD=3.6332;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:30:83.20:2140,0,83	1/1:5,9:14:42.14:2589,42,0	0/0:27,0:26:36.50:0,36,1505	0/0:16,0:16:30.07:0,30,952	0/1:18,0:18:62.47:443,0,62	0/1:17,0:17:29.76:1035,0,30	0/1:19,0:19:99:615,0,143	1/1:42,0:42:99:4670,99,0	0/0:29,0:29:69.19:0,69,2379	1/1:26,8:34:78.27:4370,78,0	1/1:18,8:26:63.13:3245,63,0	1/1:18,10:29:72.25:4354,72,0	1/1:27,11:38:90.31:5107,90,0	1/1:11,11:23:48.16:2934,48,0	1/1:19,25:44:99:6431,114,0	1/1:15,14:30:51.10:4310,51,0	1/1:16,6:23:45.11:2382,45,0	1/1:6,8:15:30.10:1812,30,0	1/1:12,0:18:0.26:668,0,0	1/1:7,0:21:20.10:841,20,0	0/1:18,0:28:38.54:632,0,39	1/1:24,13:38:99:5165,99,0	1/1:16,9:26:63.17:3097,63,0	1/1:19,9:30:57.20:3099,57,0	0/1:23,0:23:29.66:1457,0,30	1/1:16,15:32:93.32:5339,93,0	1/1:11,19:31:84.13:5356,84,0	1/1:7,5:12:30.10:1772,30,0
chr10	9593579	.	A	ACAACAACAACAG	56608.76	PASS	AB=1.000;AC=49;AF=0.875;AN=56;BaseQRankSum=10.470;DP=775;FS=2.575;HRun=0;HaplotypeScore=385.9341;InbreedingCoeff=0.7305;MQ=58.26;MQ0=0;MQRankSum=-12.475;QD=80.52;ReadPosRankSum=6.406;VQSLOD=3.8868;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:26,14:40:99:5249,111,0	1/1:15,0:15:42.14:1567,42,0	0/0:27,0:26:36.09:0,36,1353	0/0:16,0:16:32.84:0,33,880	1/1:23,6:29:57.65:1510,58,0	1/1:15,9:24:62.93:2885,63,0	1/1:19,5:24:62.79:2389,63,0	1/1:42,0:42:39.85:2464,40,0	0/0:29,0:29:69.20:0,69,2170	1/1:34,0:34:39.85:2512,40,0	1/1:25,0:25:6.76:1827,7,0	1/1:30,0:30:5.60:2578,6,0	1/1:37,0:37:65.05:2992,65,0	1/1:23,0:23:47.90:1789,48,0	1/1:45,0:44:85.23:3815,85,0	1/1:30,0:30:12.21:2555,12,0	1/1:23,0:23:35.96:1391,36,0	1/1:14,0:14:30.09:1078,30,0	1/1:18,0:18:19.13:852,19,0	1/1:21,0:21:3.19:1013,3,0	0/1:28,0:28:62.30:771,0,62	1/1:39,0:39:92.23:2986,92,0	1/1:25,0:26:39.70:1729,40,0	1/1:30,0:30:40.20:1813,40,0	1/1:15,12:28:74.92:3377,75,0	1/1:34,0:34:16.16:3061,16,0	1/1:32,0:32:83.87:3320,84,0	1/1:12,0:12:27.09:1084,27,0
chr10	9593967	.	CT	C	670.06	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.499;DP=744;FS=3.744;HRun=7;HaplotypeScore=76.2294;InbreedingCoeff=0.9960;MQ=81.69;MQ0=1;MQRankSum=-0.566;QD=23.11;ReadPosRankSum=2.809;VQSLOD=3.9543;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,99,1245	0/0:16,0:16:45.14:0,45,566	0/0:20,0:19:47.75:0,48,506	0/0:23,0:22:24.26:0,24,501	0/0:34,0:34:87.28:0,87,1094	0/0:33,0:33:93.27:0,93,1145	0/0:24,0:24:63.19:0,63,780	0/0:37,0:36:87.27:0,87,1082	0/0:31,0:31:84.26:0,84,1045	0/0:22,0:22:66.21:0,66,830	0/0:23,0:23:66.21:0,66,830	0/0:21,0:21:60.19:0,60,755	0/0:27,0:27:72.10:0,72,851	0/0:26,0:26:75.24:0,75,944	1/1:2,27:29:75.17:765,75,0	0/0:26,0:26:75.21:0,75,908	0/0:28,0:28:72.22:0,72,893	0/0:31,0:31:81.26:0,81,1019	0/0:22,0:23:57.02:0,57,681	0/0:37,0:37:84.27:0,84,1056	0/0:19,0:19:57.13:0,57,665	0/0:32,0:32:93.29:0,93,1159	0/0:25,0:25:72.22:0,72,891	0/0:24,0:24:69.21:0,69,856	0/0:34,0:34:93.76:0,94,1160	0/0:31,0:31:84.25:0,84,1043	0/0:25,0:25:75.22:0,75,920	0/0:9,0:9:24.05:0,24,277
chr10	9594363	.	AACACACAC	A	5010.23	PASS	AB=0.745;AC=36;AF=0.667;AN=54;BaseQRankSum=-1.311;DP=544;FS=11.553;HRun=0;HaplotypeScore=154.6081;InbreedingCoeff=0.5663;MQ=69.95;MQ0=12;MQRankSum=-5.746;QD=15.37;ReadPosRankSum=0.345;VQSLOD=3.6022;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:35:24.08:0,24,749	1/1:1,0:4:5.81:32,6,0	./.	0/0:27,0:15:3:0,3,27	0/0:21,0:25:29.94:0,30,955	0/0:19,0:24:42.14:0,42,1379	0/0:18,0:21:15.03:0,15,386	1/1:18,0:17:0.83:37,1,0	0/0:15,0:15:2.57:0,3,19	1/1:9,9:16:28.64:613,29,0	1/1:11,9:20:12.51:298,13,0	1/1:11,2:12:6.02:149,6,0	1/1:10,1:12:6.60:88,7,0	1/1:16,3:19:12.04:295,12,0	0/1:21,1:26:51.07:51,0,174	1/1:6,8:14:21.07:521,21,0	0/1:7,8:15:73.17:429,0,73	1/1:10,1:10:3.01:75,3,0	1/1:15,1:18:8.15:181,8,0	1/1:21,0:36:36.09:621,36,0	0/0:19,0:19:1.82:0,2,5	1/1:10,9:19:17.89:384,18,0	1/1:12,5:16:9.03:173,9,0	1/1:16,4:20:3.01:75,3,0	0/0:20,0:20:12.04:0,12,368	1/1:9,5:14:15.02:259,15,0	1/1:7,7:14:12.04:279,12,0	1/1:10,6:16:18.06:451,18,0
chr10	9594426	.	TTA	T	708.36	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=2.918;DP=505;FS=2.745;HRun=0;HaplotypeScore=115.5076;InbreedingCoeff=0.9722;MQ=70.41;MQ0=1;MQRankSum=-0.655;QD=29.51;ReadPosRankSum=-0.328;VQSLOD=4.9444;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:60.17:0,60,289	0/0:8,0:8:24.08:0,24,477	0/0:23,0:15:16.44:0,16,315	0/0:20,0:16:34.73:0,35,375	0/0:28,0:28:25.92:0,26,216	0/0:15,0:15:35.48:0,35,169	0/0:10,0:10:21.43:0,21,84	0/0:30,0:30:90.21:0,90,1452	1/1:0,6:6:12.04:185,12,0	0/0:24,0:24:69.10:0,69,1235	0/0:19,0:19:54.16:0,54,1021	0/0:13,0:13:39.13:0,39,747	0/0:12,0:12:36.11:0,36,675	0/0:9,0:9:26.45:0,26,485	1/1:1,17:18:48.01:640,48,0	0/0:20,0:20:60.11:0,60,1072	0/0:26,0:26:71.71:0,72,1150	0/0:20,0:20:54.05:0,54,1028	0/0:20,0:20:57.13:0,57,972	0/0:35,0:35:99:0,105,1909	0/0:9,0:9:27.09:0,27,509	0/0:12,0:12:36.12:0,36,640	0/0:11,0:11:30.06:0,30,555	0/0:10,0:10:27.09:0,27,512	0/0:22,0:22:53.13:0,53,214	0/0:20,0:20:60.08:0,60,1083	0/0:21,0:21:54.58:0,55,924	0/0:19,0:19:51.12:0,51,938
chr10	9594427	.	TA	T	2203.90	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=-0.596;DP=500;FS=0.909;HRun=8;HaplotypeScore=99.7595;InbreedingCoeff=0.8968;MQ=70.66;MQ0=0;MQRankSum=-0.109;QD=15.52;ReadPosRankSum=1.991;VQSLOD=3.6265;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,21:24:51.08:492,51,0	0/0:8,0:8:24.07:0,24,289	0/0:22,0:15:10.36:0,10,166	0/1:20,0:16:13.27:13,0,175	1/1:4,24:28:65.92:600,66,0	1/1:3,12:15:30.04:289,30,0	1/1:0,9:9:24.04:232,24,0	0/0:30,0:30:72.17:0,72,812	1/1:6,0:6:11.40:57,11,0	0/0:24,0:24:60.18:0,60,715	0/0:20,0:20:54.14:0,54,628	0/0:13,0:13:36.11:0,36,434	0/0:12,0:12:36.10:0,36,420	0/0:9,0:9:24.07:0,24,290	1/1:18,0:18:34.08:172,34,0	0/0:20,0:20:57.15:0,57,666	0/0:26,0:26:57.12:0,57,657	0/0:19,0:19:51.16:0,51,615	0/0:19,0:19:51.10:0,51,580	0/0:35,0:35:93.26:0,93,1107	0/0:9,0:9:24.05:0,24,268	0/0:12,0:12:27.08:0,27,325	0/0:11,0:11:27.08:0,27,326	0/0:10,0:10:24.07:0,24,290	1/1:1,21:22:57.09:549,57,0	0/0:20,0:20:54.16:0,54,642	0/0:21,0:21:51.54:0,52,560	0/0:18,0:18:48.13:0,48,567
chr10	9595536	.	C	CAGATAGAT	710.45	PASS	AB=1.000;AC=30;AF=0.600;AN=50;BaseQRankSum=8.002;DP=628;FS=7.344;HRun=0;HaplotypeScore=176.7751;InbreedingCoeff=-0.0031;MQ=70.54;MQ0=2;MQRankSum=1.882;QD=1.39;ReadPosRankSum=-5.282;VQSLOD=0.2607;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:14,12:29:2.62:19,3,0	0/1:6,0:6:2.19:2,0,68	./.	./.	1/1:17,9:30:3.01:85,3,0	./.	0/1:18,0:18:7.84:137,0,8	1/1:32,0:32:1.82:5,2,0	0/1:19,0:19:12.86:18,0,13	0/1:42,0:42:37.72:38,0,203	0/1:20,0:20:5.81:6,0,38	0/1:27,0:27:1.08:1,0,72	0/1:32,0:32:11.64:12,0,15	1/1:14,0:14:6.66:21,7,0	1/1:28,0:28:10.96:213,11,0	1/1:25,0:25:6.66:20,7,0	0/1:18,0:18:8.68:9,0,50	0/1:20,0:19:24:24,0,34	0/0:20,0:21:30.07:0,30,553	0/0:27,0:28:54.14:0,54,1106	0/0:10,0:10:12.01:0,12,195	0/1:16,0:16:20.99:21,0,35	0/1:31,0:31:13.19:13,0,30	1/1:10,0:10:2.22:7,2,0	1/1:14,0:27:11.97:97,12,0	0/1:44,0:44:57.51:58,0,100	1/1:24,0:24:14.10:60,14,0	0/0:11,0:11:12.04:0,12,290
chr10	9595584	.	T	TAGAC	7133.71	PASS	AB=0.872;AC=33;AF=0.589;AN=56;BaseQRankSum=-7.413;DP=682;FS=0.000;HRun=0;HaplotypeScore=140.1550;InbreedingCoeff=0.4484;MQ=61.49;MQ0=15;MQRankSum=2.981;QD=15.02;ReadPosRankSum=1.981;VQSLOD=4.5891;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:29.76:0,30,222	0/1:1,8:10:15.16:71,0,15	0/0:26,0:13:12.91:0,13,199	0/1:15,0:5:6.07:6,0,76	0/0:30,0:30:15.40:0,15,370	0/0:23,0:23:32.85:0,33,274	0/1:16,0:16:16.17:16,0,125	1/1:38,0:37:86.47:681,86,0	0/1:23,0:23:32.52:37,0,33	1/1:7,35:42:99:1629,105,0	1/1:3,19:22:6.02:153,6,0	1/1:4,19:23:9.03:231,9,0	1/1:3,21:24:9.02:231,9,0	1/1:0,16:16:9.03:231,9,0	0/0:20,0:20:17.70:0,18,160	1/1:3,20:24:11.66:244,12,0	1/1:3,20:25:9.03:230,9,0	0/1:6,16:21:0.93:441,0,1	0/0:27,0:25:60.09:0,60,692	0/0:41,0:41:99:0,111,1290	0/0:14,0:14:35.98:0,36,337	1/1:3,16:19:17.89:339,18,0	1/1:5,24:29:11.71:307,12,0	1/1:2,7:9:3.01:77,3,0	0/1:27,0:27:99:123,0,300	1/1:5,31:40:99:1522,102,0	1/1:4,27:31:14.95:384,15,0	0/1:18,0:18:54.14:179,0,54
chr10	9595586	.	GACAGAC	G	418.46	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=3.694;DP=674;FS=8.171;HRun=0;HaplotypeScore=177.6196;InbreedingCoeff=0.5122;MQ=61.53;MQ0=14;MQRankSum=-3.328;QD=9.96;ReadPosRankSum=-0.570;VQSLOD=1.4587;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:29.64:0,30,740	0/0:11,0:11:13.11:0,13,278	0/0:27,0:13:37.79:0,38,772	0/0:15,0:5:11.32:0,11,254	0/0:30,0:30:64.41:0,64,1388	0/0:23,0:23:39.13:0,39,1010	0/0:16,0:16:29.47:0,29,572	0/0:39,0:38:99:0,105,2042	1/1:18,5:23:33.07:509,33,0	0/0:44,0:43:99:0,126,2859	0/0:21,0:21:31.42:0,31,253	0/0:24,0:24:18.03:0,18,365	0/0:24,0:24:12.51:0,13,319	0/0:16,0:16:9.03:0,9,246	0/1:19,0:19:12.81:13,0,130	0/0:22,0:22:14.61:0,15,336	0/0:25,0:25:15.01:0,15,289	0/0:21,0:19:24.06:0,24,546	0/0:26,0:25:69.22:0,69,1761	0/0:40,0:40:99:0,114,3157	0/0:14,0:14:36.12:0,36,945	0/0:19,0:19:39.97:0,40,597	0/0:27,0:27:16.44:0,16,358	0/0:8,0:8:3.01:0,3,81	0/0:26,0:26:54.19:0,54,1470	0/0:40,0:40:99:0,109,2541	0/0:33,0:33:29.13:0,29,699	0/0:18,0:18:48.16:0,48,1277
chr10	9595590	.	GAC	G	161.85	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=4.796;DP=660;FS=20.994;HRun=0;HaplotypeScore=144.0514;InbreedingCoeff=0.7815;MQ=61.51;MQ0=13;MQRankSum=-3.534;QD=3.95;ReadPosRankSum=-0.339;VQSLOD=1.4846;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:29.94:0,30,516	0/0:11,0:11:13.10:0,13,146	0/0:30,0:14:29.70:0,30,545	0/0:15,0:5:7.58:0,8,154	0/0:30,0:30:56.11:0,56,909	0/0:21,0:21:39.13:0,39,673	0/0:16,0:16:20.29:0,20,319	0/0:41,0:40:95.83:0,96,1395	1/1:9,13:22:5.57:102,6,0	0/0:42,0:41:99:0,110,1529	0/0:20,0:20:28.42:0,28,125	0/0:23,0:23:15.04:0,15,184	0/0:22,0:22:12.50:0,12,142	0/0:15,0:15:9.02:0,9,90	1/1:4,15:19:15.86:167,16,0	0/0:24,0:24:17.88:0,18,227	0/0:25,0:25:12.03:0,12,133	0/0:17,0:16:21.03:0,21,204	0/0:28,0:27:75.23:0,75,1215	0/0:38,0:38:99:0,108,1825	0/0:12,0:12:36.12:0,36,606	0/0:19,0:19:37.35:0,37,325	0/0:24,0:24:13.49:0,13,126	0/0:10,0:10:8.95:0,9,72	0/0:25,0:25:57.20:0,57,976	0/0:38,0:38:92.93:0,93,1369	0/0:31,0:31:29.11:0,29,363	0/0:19,0:19:48.14:0,48,800
chr10	9595608	.	TAC	T	312.64	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.292;DP=629;FS=14.318;HRun=0;HaplotypeScore=136.8703;InbreedingCoeff=0.9265;MQ=66.04;MQ0=3;MQRankSum=-5.141;QD=7.82;ReadPosRankSum=-0.445;VQSLOD=2.5970;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:33.11:0,33,636	0/0:10,0:10:16.12:0,16,234	0/0:28,0:23:46.99:0,47,996	0/0:13,0:7:12.90:0,13,197	0/0:33,0:33:73.55:0,74,1315	0/0:21,0:21:45.15:0,45,869	0/0:11,0:11:27.09:0,27,511	0/0:33,0:33:91.52:0,92,1625	1/1:1,20:21:18.87:216,19,0	0/0:39,0:39:99:0,117,2177	0/0:17,0:17:31.44:0,31,235	0/0:22,0:22:33.11:0,33,594	0/0:17,0:17:21.07:0,21,394	0/0:13,0:13:12.04:0,12,232	1/1:1,18:19:12.66:211,13,0	0/0:25,0:25:30.10:0,30,548	0/0:24,0:24:24.06:0,24,426	0/0:19,0:19:33.10:0,33,591	0/0:26,0:26:78.26:0,78,1461	0/0:39,0:39:99:0,117,2219	0/0:14,0:14:42.14:0,42,772	0/0:17,0:17:40.36:0,40,459	0/0:22,0:22:19.46:0,19,320	0/0:7,0:7:12.04:0,12,218	0/0:29,0:29:78.27:0,78,1479	0/0:34,0:34:99:0,99,1807	0/0:35,0:35:50.18:0,50,840	0/0:19,0:19:54.18:0,54,1020
chr10	9596009	.	A	AT	1461.69	PASS	AC=8;AF=0.154;AN=52;BaseQRankSum=7.828;DP=785;FS=13.887;HRun=1;HaplotypeScore=78.1131;InbreedingCoeff=0.8983;MQ=52.58;MQ0=13;MQRankSum=5.479;QD=13.05;ReadPosRankSum=-4.225;VQSLOD=0.4041;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,36:31:54.18:809,54,0	0/0:3,0:3:9.03:0,9,117	./.	0/0:25,0:1:2.99:0,3,23	1/1:3,18:13:14.96:175,15,0	1/1:0,39:20:36.12:537,36,0	./.	0/0:31,0:28:81.25:0,81,1027	0/0:24,0:22:54.12:0,54,679	0/0:30,0:29:81.26:0,81,1052	0/0:17,0:17:39.12:0,39,506	0/0:31,0:31:93.29:0,93,1193	0/0:36,0:36:99:0,105,1348	0/0:41,0:41:99:0,117,1473	0/0:34,0:34:90.27:0,90,1149	0/0:29,0:29:87.26:0,87,1100	0/0:51,0:51:99:0,147,1888	0/0:35,0:35:93.30:0,93,1206	0/0:32,0:26:69.20:0,69,880	0/0:36,0:36:99:0,108,1386	0/0:48,0:48:99:0,141,1784	0/0:23,0:23:57.17:0,57,726	0/0:17,0:17:48.16:0,48,623	0/0:29,0:29:87.24:0,87,1098	1/1:1,14:11:6.02:90,6,0	0/0:28,0:28:78.24:0,78,988	0/0:29,0:29:84.26:0,84,1075	0/0:5,0:5:15.05:0,15,195
chr10	9597788	.	TTTA	T	2501.37	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=7.762;DP=709;FS=2.330;HRun=0;HaplotypeScore=105.3362;InbreedingCoeff=0.9994;MQ=66.97;MQ0=1;MQRankSum=1.029;QD=33.35;ReadPosRankSum=1.580;VQSLOD=4.4100;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,141,2980	0/0:18,0:18:51.18:0,51,1094	0/0:17,0:17:39.13:0,39,736	0/0:19,0:16:34.93:0,35,636	0/0:29,0:29:87.28:0,87,1782	0/0:25,0:25:63.22:0,63,1308	0/0:35,0:35:96.31:0,96,1963	0/0:36,0:36:84.29:0,84,1739	0/0:23,0:23:66.20:0,66,1351	0/0:27,0:27:75.25:0,75,1562	0/0:24,0:24:66.20:0,66,1226	0/0:28,0:28:78.25:0,78,1580	0/0:17,0:17:48.15:0,48,989	0/0:31,0:31:81.28:0,81,1687	0/0:31,0:31:72.24:0,72,1484	0/0:30,0:30:84.28:0,84,1752	0/0:19,0:19:57.20:0,57,1204	0/0:17,0:17:45.15:0,45,954	1/1:4,10:14:30.09:441,30,0	1/1:2,25:27:72.17:1043,72,0	1/1:4,30:34:75.25:1160,75,0	0/0:26,0:26:75.25:0,75,1534	0/0:21,0:21:48.13:0,48,957	0/0:22,0:22:63.22:0,63,1315	0/0:30,0:30:90.31:0,90,1851	0/0:22,0:22:60.21:0,60,1279	0/0:29,0:29:81.25:0,81,1658	0/0:10,0:10:27.09:0,27,579
chr10	9598837	.	GT	G	15860.86	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-5.949;DP=664;FS=2.636;HRun=8;HaplotypeScore=93.3531;InbreedingCoeff=0.9926;MQ=75.31;MQ0=0;MQRankSum=-7.933;QD=24.98;ReadPosRankSum=5.458;VQSLOD=4.9618;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,25:27:72.11:694,72,0	1/1:1,13:14:39.06:377,39,0	0/0:16,0:15:33.24:0,33,463	0/0:13,0:13:24.58:0,25,300	1/1:4,30:34:84.12:811,84,0	1/1:1,29:30:81.13:782,81,0	1/1:1,21:22:60.10:579,60,0	1/1:3,20:23:57.09:550,57,0	1/1:2,29:31:81.13:782,81,0	1/1:0,23:23:69.09:659,69,0	1/1:5,14:19:39.05:377,39,0	1/1:3,21:24:54.08:521,54,0	1/1:0,29:29:78.13:753,78,0	1/1:1,20:21:60.10:579,60,0	1/1:2,23:25:60.10:579,60,0	1/1:3,26:29:69.10:666,69,0	1/1:1,19:20:54.09:521,54,0	1/1:2,9:11:21.03:203,21,0	1/1:4,21:25:63.06:592,63,0	1/1:2,23:25:69.11:666,69,0	1/1:0,23:23:66.11:637,66,0	1/1:2,30:32:74.86:724,75,0	1/1:3,25:28:68.39:665,68,0	1/1:2,31:33:84.13:811,84,0	1/1:0,29:29:87.14:840,87,0	1/1:1,27:28:80.97:768,81,0	1/1:1,22:23:57.08:550,57,0	1/1:1,6:7:18.03:174,18,0
chr10	9600763	.	AT	A	5310.87	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=12.347;DP=613;FS=0.000;HRun=8;HaplotypeScore=68.5759;InbreedingCoeff=0.9872;MQ=72.93;MQ0=0;MQRankSum=0.422;QD=24.14;ReadPosRankSum=0.640;VQSLOD=5.3642;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,42:45:99:1101,114,0	0/0:7,0:7:15.05:0,15,181	0/0:18,1:19:18.09:0,18,452	0/0:5,0:5:11.40:0,11,111	1/1:0,25:25:72.11:695,72,0	1/1:2,24:26:69.11:666,69,0	1/1:4,22:26:57.09:550,57,0	0/0:29,0:29:69.20:0,69,822	0/0:25,0:25:72.21:0,72,860	0/0:30,0:30:75.21:0,75,890	0/0:34,0:34:99:0,102,1232	0/0:17,0:17:51.16:0,51,616	0/0:15,0:15:39.12:0,39,471	0/0:19,0:19:51.16:0,51,616	0/0:1,0:22:57.50:0,58,292	0/0:25,0:25:69.21:0,69,834	0/0:20,0:20:60.18:0,60,725	0/0:12,0:12:30.07:0,30,348	1/1:5,23:28:69.11:666,69,0	1/1:1,21:22:59.99:559,60,0	1/1:4,17:21:48.07:464,48,0	0/0:20,0:20:53.83:0,54,683	0/0:17,0:17:45.14:0,45,543	0/0:9,0:9:27.08:0,27,326	1/1:3,24:27:63.10:608,63,0	0/0:35,0:35:93.27:0,93,1111	0/0:28,0:27:75.18:0,75,869	0/0:5,0:5:15.05:0,15,181
chr10	9601486	.	A	AGCAA	2675.80	PASS	AB=1.000;AC=43;AF=0.977;AN=44;BaseQRankSum=-0.106;DP=59;FS=0.000;HRun=0;HaplotypeScore=18.1828;InbreedingCoeff=-0.1378;MQ=92.98;MQ0=0;MQRankSum=-1.520;QD=48.65;ReadPosRankSum=1.025;VQSLOD=3.5853;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,0:4:12.04:254,12,0	./.	1/1:2,1:3:9.01:159,9,0	0/1:4,0:4:18.31:47,0,18	1/1:1,0:3:9.01:148,9,0	1/1:2,0:3:6.02:114,6,0	1/1:0,0:1:3.01:68,3,0	1/1:6,0:6:15.03:269,15,0	1/1:1,0:2:3.01:50,3,0	1/1:1,0:3:9.03:180,9,0	1/1:1,0:1:3.01:71,3,0	1/1:0,0:4:12.04:218,12,0	1/1:0,0:3:9.03:198,9,0	1/1:0,0:1:3.01:50,3,0	1/1:1,0:1:3:25,3,0	./.	1/1:2,0:3:6.02:148,6,0	./.	1/1:0,0:2:6.02:150,6,0	1/1:1,0:3:9.03:205,9,0	1/1:0,0:1:3.01:67,3,0	1/1:1,0:2:3.01:67,3,0	./.	./.	./.	1/1:1,0:2:6.01:78,6,0	1/1:0,0:2:6.02:130,6,0	1/1:0,0:1:3.01:67,3,0
chr10	9602140	.	C	CT	1344.09	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.653;DP=692;FS=8.100;HRun=1;HaplotypeScore=76.5622;InbreedingCoeff=0.9954;MQ=83.01;MQ0=0;MQRankSum=-0.659;QD=32.78;ReadPosRankSum=1.442;VQSLOD=2.7839;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,99,1268	0/0:9,0:9:27.09:0,27,350	0/0:25,0:25:63.64:0,64,749	0/0:20,0:20:25.65:0,26,459	0/0:26,0:26:63.15:0,63,817	0/0:30,0:30:84.27:0,84,1091	0/0:31,0:31:87.28:0,87,1130	0/0:24,0:24:69.22:0,69,895	0/0:33,0:33:96.30:0,96,1231	0/0:24,0:23:63.20:0,63,818	0/0:15,0:15:36.12:0,36,467	0/0:30,0:30:84.27:0,84,1090	0/0:30,0:30:90.27:0,90,1150	0/0:31,0:31:87.26:0,87,1100	1/1:3,38:41:96.33:1439,96,0	0/0:22,0:22:63.20:0,63,818	0/0:26,0:26:75.21:0,75,943	0/0:16,0:16:45.15:0,45,583	0/0:23,0:23:63.20:0,63,817	0/0:24,0:24:66.21:0,66,856	0/0:36,0:36:99:0,102,1324	0/0:26,0:26:60.19:0,60,778	0/0:21,0:21:54.18:0,54,700	0/0:23,0:23:69.22:0,69,896	0/0:19,0:19:54.17:0,54,697	0/0:27,0:27:75.24:0,75,974	0/0:18,0:18:54.18:0,54,701	0/0:8,0:8:24.08:0,24,303
chr10	9602376	.	TACA	T	1784.68	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.702;DP=758;FS=3.814;HRun=0;HaplotypeScore=109.4717;InbreedingCoeff=0.9700;MQ=79.87;MQ0=0;MQRankSum=-3.179;QD=40.56;ReadPosRankSum=1.642;VQSLOD=5.1356;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:72.25:0,72,1570	0/0:13,0:13:39.13:0,39,861	0/0:21,0:21:60.21:0,60,1243	0/0:17,0:17:45.15:0,45,988	0/0:33,0:33:96.33:0,96,2103	0/0:34,0:34:99:0,102,2251	0/0:25,0:25:66.21:0,66,1411	0/0:31,0:31:78.27:0,78,1723	0/0:29,0:29:87.27:0,87,1838	0/0:26,0:26:72.24:0,72,1550	0/0:30,0:30:84.29:0,84,1854	0/0:28,0:28:78.25:0,78,1679	0/0:40,0:40:99:0,111,2422	0/0:31,0:31:87.27:0,87,1819	1/1:3,41:44:99:1880,117,0	0/0:40,0:40:99:0,117,2583	0/0:34,0:34:99:0,102,2163	0/0:14,0:14:33.11:0,33,728	0/0:16,0:16:45.14:0,45,955	0/0:35,0:35:99:0,105,2303	0/0:23,0:23:66.21:0,66,1415	0/0:23,0:23:69.24:0,69,1521	0/0:31,0:31:87.30:0,87,1907	0/0:23,0:23:69.24:0,69,1523	0/0:27,0:27:75.26:0,75,1643	0/0:35,0:35:99:0,105,2319	0/0:23,0:22:69.24:0,69,1519	0/0:6,0:6:12.04:0,12,265
chr10	9603089	.	G	GA	97.60	PASS	AC=8;AF=0.154;AN=52;BaseQRankSum=1.151;DP=122;FS=1.648;HRun=7;HaplotypeScore=20.8192;InbreedingCoeff=0.4346;MQ=76.63;MQ0=0;MQRankSum=-2.706;QD=16.27;ReadPosRankSum=2.163;VQSLOD=2.0472;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,1:1:3.01:36,3,0	0/0:3,0:3:6.01:0,6,58	0/0:6,0:6:9.48:0,9,85	0/0:4,0:4:2.98:0,3,29	./.	./.	1/1:0,2:2:6.02:72,6,0	0/0:25,0:25:66.10:0,66,637	0/0:3,0:3:9.01:0,9,87	0/0:2,0:2:6.01:0,6,58	0/0:1,0:1:3:0,3,29	0/0:2,0:2:6.01:0,6,58	0/0:1,0:1:3:0,3,29	0/0:2,0:2:6.01:0,6,58	1/1:0,1:1:3.01:36,3,0	0/0:3,0:3:9.01:0,9,87	0/0:8,0:8:12.02:0,12,116	0/0:10,0:10:21.03:0,21,203	0/0:11,0:11:30.05:0,30,290	0/0:2,0:2:6.01:0,6,58	0/0:3,0:3:6.01:0,6,58	0/0:1,0:1:3:0,3,29	0/0:4,0:4:9.01:0,9,87	0/0:2,0:2:2.91:0,3,29	1/1:0,2:2:6.02:72,6,0	0/0:1,0:1:3:0,3,29	0/0:6,0:6:18.03:0,18,174	0/0:16,0:16:39.02:0,39,363
chr10	9603132	.	CT	C	186.19	PASS	AC=6;AF=0.136;AN=44;BaseQRankSum=2.101;DP=151;FS=1.183;HRun=9;HaplotypeScore=23.9196;InbreedingCoeff=0.5666;MQ=76.76;MQ0=3;MQRankSum=0.679;QD=10.34;ReadPosRankSum=1.122;VQSLOD=0.6827;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	0/0:3,0:3:9.03:0,9,104	0/0:11,0:6:14.88:0,15,139	0/0:11,0:9:0.27:0,0,66	./.	./.	./.	0/0:15,0:15:42.11:0,42,472	0/0:3,0:3:8.98:0,9,89	0/0:5,0:5:15.04:0,15,173	0/0:3,0:3:9.03:0,9,104	0/0:3,0:3:6.02:0,6,69	0/0:4,0:3:9.03:0,9,104	0/0:3,0:3:6.02:0,6,69	./.	0/0:4,0:4:12.04:0,12,138	0/0:12,0:11:33.10:0,33,381	0/0:11,0:10:30.06:0,30,333	1/1:4,9:11:24.01:220,24,0	1/1:0,1:1:3:27,3,0	1/1:1,3:4:6:55,6,0	0/0:3,0:3:6.02:0,6,69	0/0:7,0:7:18.05:0,18,208	0/0:5,0:4:6.02:0,6,70	./.	0/0:1,0:1:3.01:0,3,35	0/0:9,0:9:24.02:0,24,255	0/0:18,0:16:45.13:0,45,519
chr10	9604625	.	CTT	C	2157.66	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=8.215;DP=575;FS=1.751;HRun=3;HaplotypeScore=78.1921;InbreedingCoeff=0.8863;MQ=79.23;MQ0=1;MQRankSum=-0.729;QD=22.71;ReadPosRankSum=1.517;VQSLOD=1.7661;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,21:23:51.10:751,51,0	0/0:12,0:12:36.10:0,36,651	0/0:46,0:34:66.47:0,66,1270	0/0:56,0:34:20.90:0,21,575	1/1:0,10:10:23.97:337,24,0	1/1:0,6:6:9.03:137,9,0	1/1:0,20:20:35.96:550,36,0	0/0:21,0:21:63.15:0,63,1036	0/0:22,0:22:66.18:0,66,1116	0/0:25,0:25:75.17:0,75,1195	0/0:21,0:21:63.17:0,63,1048	0/0:20,0:20:60.15:0,60,986	0/0:28,0:28:84.26:0,84,1509	0/0:21,0:21:60.15:0,60,942	0/1:22,0:22:6.96:7,0,417	0/0:19,0:20:57.17:0,57,1002	0/0:15,0:15:45.15:0,45,868	0/0:5,0:5:15.04:0,15,257	0/0:11,0:11:30.09:0,30,510	0/0:21,0:21:60.16:0,60,1003	0/0:17,0:17:48.13:0,48,859	0/0:26,0:26:78.09:0,78,1261	0/0:16,0:16:48.12:0,48,760	0/0:19,0:19:53.53:0,54,953	1/1:0,14:14:36.12:550,36,0	0/0:20,0:20:60.10:0,60,878	0/0:23,0:23:63.20:0,63,1151	0/0:14,0:14:42.10:0,42,705
chr10	9605297	.	T	TACAC	3718.50	PASS	AB=0.899;AC=40;AF=0.741;AN=54;BaseQRankSum=-2.648;DP=621;FS=2.515;HRun=0;HaplotypeScore=133.3409;InbreedingCoeff=0.4792;MQ=67.18;MQ0=10;MQRankSum=2.529;QD=7.54;ReadPosRankSum=-2.070;VQSLOD=2.7489;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:37:30.17:34,0,30	1/1:3,5:9:6.02:140,6,0	0/1:31,0:21:0:0,0,0	./.	0/0:22,0:27:12.38:0,12,131	1/1:15,6:23:3.26:76,3,0	1/1:10,5:19:17.20:228,17,0	1/1:28,0:27:5.84:33,6,0	0/1:16,0:20:22.30:22,0,78	1/1:18,6:24:15.52:306,16,0	1/1:7,3:11:0.47:1,0,0	1/1:22,7:32:5.55:140,6,0	1/1:23,0:23:9.50:139,10,0	1/1:16,0:15:11.55:174,12,0	0/0:17,0:31:27.03:0,27,250	1/1:10,9:21:21.07:491,21,0	1/1:19,8:31:17.99:306,18,0	0/1:14,0:13:68.80:107,0,69	0/0:14,0:14:3.01:0,3,46	0/0:20,0:21:24.05:0,24,309	0/0:19,0:20:30.05:0,30,409	1/1:23,0:23:10.40:161,10,0	1/1:19,0:19:11.98:133,12,0	1/1:21,9:39:14.52:230,15,0	1/1:9,0:11:2.74:12,3,0	1/1:13,8:25:38.55:593,39,0	1/1:19,7:26:15.88:249,16,0	1/1:6,2:8:6.02:141,6,0
chr10	9605690	.	GT	G	21019.50	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=8.161;DP=757;FS=1.664;HRun=4;HaplotypeScore=186.2627;InbreedingCoeff=0.9795;MQ=79.19;MQ0=0;MQRankSum=-9.115;QD=30.42;ReadPosRankSum=4.942;VQSLOD=3.0150;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,36:39:92.13:1071,92,0	1/1:0,13:13:39.12:465,39,0	0/0:16,0:16:45.10:0,45,535	0/0:24,0:24:59.85:0,60,669	1/1:2,34:36:93.28:1113,93,0	1/1:1,32:33:96.21:1115,96,0	1/1:4,22:26:66.20:790,66,0	1/1:5,38:43:99:1358,114,0	0/0:26,0:26:75.17:0,75,1005	1/1:1,37:38:99:1280,108,0	1/1:0,16:16:48.10:558,48,0	1/1:1,23:24:66.20:788,66,0	1/1:3,26:30:69.17:809,69,0	1/1:4,14:18:39.12:467,39,0	1/1:0,37:37:99:1186,99,0	1/1:2,33:35:84.26:1007,84,0	1/1:1,39:40:99:1185,99,0	1/1:1,24:25:60.18:719,60,0	1/1:4,15:19:45.08:499,45,0	1/1:1,27:28:78.15:902,78,0	1/1:2,37:39:99:1186,99,0	1/1:1,29:30:78.24:933,78,0	1/1:1,20:21:48.15:573,48,0	1/1:0,25:25:63.19:755,63,0	1/1:1,12:13:36.07:415,36,0	1/1:1,23:24:69.19:805,69,0	1/1:3,30:33:78.09:932,78,0	1/1:0,6:6:9.03:108,9,0
chr10	9607109	.	AT	A	6932.12	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=6.399;DP=526;FS=2.992;HRun=9;HaplotypeScore=57.2397;InbreedingCoeff=0.9537;MQ=74.62;MQ0=0;MQRankSum=-6.431;QD=22.88;ReadPosRankSum=-0.403;VQSLOD=5.5229;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:30.09:0,30,346	1/1:2,16:18:45.02:412,45,0	0/0:14,0:13:12.87:0,13,338	0/0:9,0:9:8.99:0,9,157	0/0:36,0:36:99:0,105,1192	0/0:19,0:19:54.16:0,54,623	0/0:14,0:14:42.11:0,42,476	1/1:7,22:29:66:599,66,0	0/0:18,0:18:28.38:0,28,450	1/1:2,22:24:66.03:604,66,0	1/1:3,21:24:59.98:541,60,0	1/1:2,15:17:42.02:384,42,0	1/1:0,24:24:66.04:604,66,0	1/1:2,10:12:27.01:247,27,0	0/0:26,0:26:69.20:0,69,796	1/1:4,25:29:72.03:659,72,0	1/1:1,16:17:30.01:275,30,0	1/1:1,6:7:18.01:165,18,0	0/0:2,0:13:33.69:0,34,177	0/0:2,0:28:74.03:0,74,382	0/0:0,0:2:2.84:0,3,14	1/1:0,14:14:42.02:384,42,0	1/1:0,23:23:69.04:632,69,0	1/1:0,8:8:24.01:220,24,0	0/0:31,0:31:84.25:0,84,968	1/1:1,21:22:63.03:576,63,0	1/1:6,22:28:60.01:549,60,0	1/1:2,5:7:9:82,9,0
chr10	9608160	.	A	AG	21191.42	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=0.289;DP=700;FS=4.473;HRun=3;HaplotypeScore=85.2123;InbreedingCoeff=0.9987;MQ=88.52;MQ0=0;MQRankSum=-6.930;QD=37.51;ReadPosRankSum=2.502;VQSLOD=5.3415;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,44:48:99:1554,111,0	1/1:0,11:11:33.11:462,33,0	0/0:23,0:23:57.89:0,58,700	0/0:27,0:27:74.68:0,75,857	1/1:5,17:22:57.14:746,57,0	1/1:0,21:21:63.21:882,63,0	1/1:2,23:25:54.18:756,54,0	1/1:3,38:41:99:1580,114,0	1/1:3,18:21:57.18:780,57,0	1/1:2,22:24:66.17:877,66,0	1/1:0,19:19:47.90:671,48,0	1/1:2,19:21:63.21:877,63,0	1/1:3,18:21:63.20:864,63,0	1/1:0,27:27:78.26:1090,78,0	1/1:2,39:41:99:1512,108,0	1/1:0,23:23:69.19:944,69,0	1/1:0,24:24:63.21:882,63,0	1/1:1,8:9:27.09:378,27,0	0/0:14,0:13:39.12:0,39,468	0/0:32,0:32:72.22:0,72,864	0/0:39,0:39:99:0,108,1284	1/1:5,13:18:51.14:664,51,0	1/1:3,17:20:51.17:714,51,0	1/1:1,30:31:90.30:1260,90,0	1/1:9,12:21:60.12:754,60,0	1/1:2,38:40:99:1556,114,0	1/1:2,26:27:78.26:1092,78,0	1/1:2,7:9:21.07:294,21,0
chr10	9608255	.	A	AG	21539.91	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-0.434;DP=682;FS=1.223;HRun=3;HaplotypeScore=91.2451;InbreedingCoeff=0.9979;MQ=80.04;MQ0=0;MQRankSum=-5.653;QD=38.40;ReadPosRankSum=3.036;VQSLOD=4.8156;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,40:45:99:1762,126,0	1/1:0,10:10:30.10:420,30,0	0/0:20,0:20:57.11:0,57,640	0/0:14,0:14:38.60:0,39,408	1/1:6,30:36:96.28:1303,96,0	1/1:2,21:23:66.21:907,66,0	1/1:3,21:23:57.19:798,57,0	1/1:4,32:36:93.31:1301,93,0	1/1:2,21:23:66.21:906,66,0	1/1:0,20:20:60.20:839,60,0	1/1:2,20:22:60.20:838,60,0	1/1:2,20:22:60.20:840,60,0	1/1:0,23:23:69.23:966,69,0	1/1:2,16:18:48.16:672,48,0	1/1:1,30:31:90.30:1260,90,0	1/1:0,27:27:81.27:1133,81,0	1/1:4,19:23:66.20:903,66,0	1/1:2,10:12:33.11:461,33,0	0/0:24,0:24:72.20:0,72,845	0/0:26,0:26:72.20:0,72,841	0/0:37,0:37:99:0,105,1260	1/1:2,26:28:75.25:1049,75,0	1/1:3,20:23:60.19:822,60,0	1/1:2,24:26:72.24:1008,72,0	1/1:8,18:26:66.18:860,66,0	1/1:4,23:27:78.25:1072,78,0	1/1:3,27:30:84.28:1169,84,0	1/1:0,6:6:18.06:251,18,0
chr10	9608331	.	G	GA	16175.13	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-8.086;DP=642;FS=3.702;HRun=7;HaplotypeScore=70.2064;InbreedingCoeff=0.9884;MQ=76.66;MQ0=0;MQRankSum=-4.028;QD=30.40;ReadPosRankSum=2.417;VQSLOD=5.2560;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,22:22:66.20:793,66,0	1/1:0,11:11:33.10:399,33,0	0/0:11,0:11:21.02:0,21,199	0/0:16,0:16:39.87:0,40,368	1/1:1,33:34:90.23:1070,90,0	1/1:3,23:26:72.22:869,72,0	1/1:5,11:16:36.09:422,36,0	1/1:4,28:32:84.26:1015,84,0	1/1:3,0:27:63.30:324,63,0	1/1:6,25:31:78.24:941,78,0	1/1:2,16:18:48.13:566,48,0	1/1:4,25:29:78.23:927,78,0	1/1:4,16:20:51.16:615,51,0	1/1:1,18:19:54.16:649,54,0	1/1:2,27:29:72.22:870,72,0	1/1:4,7:11:27.07:315,27,0	1/1:2,21:23:63.19:761,63,0	1/1:1,11:12:30.09:362,30,0	0/0:19,0:19:51.08:0,51,492	0/0:40,0:39:99:0,99,956	0/0:24,0:24:63.10:0,63,608	1/1:6,12:18:10.43:406,10,0	1/1:2,25:27:69.20:823,69,0	1/1:5,11:16:33.10:399,33,0	1/1:2,25:27:72.22:870,72,0	1/1:7,31:38:99:1248,105,0	1/1:7,28:35:96.26:1134,96,0	1/1:0,11:11:33.10:399,33,0
chr10	9609280	.	G	GGGGTGT	5781.66	PASS	AB=0.889;AC=36;AF=0.643;AN=56;BaseQRankSum=-3.419;DP=704;FS=2.992;HRun=0;HaplotypeScore=172.0602;InbreedingCoeff=0.4487;MQ=64.72;MQ0=8;MQRankSum=-4.398;QD=11.63;ReadPosRankSum=-3.843;VQSLOD=3.3754;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:33:99:380,0,217	1/1:9,0:9:20.23:274,20,0	0/0:26,0:16:41.14:0,41,408	0/0:41,0:22:47.21:0,47,517	0/1:14,0:18:23.47:23,0,161	0/1:20,0:18:99:172,0,186	0/1:28,0:26:0.73:1,0,422	1/1:20,0:20:53.69:516,54,0	0/0:22,0:29:71.78:0,72,1042	1/1:6,17:29:59.15:993,59,0	1/1:5,7:15:2.97:20,3,0	1/1:1,18:25:5.38:117,5,0	1/1:1,20:27:9.35:237,9,0	1/1:7,15:24:8.89:213,9,0	0/1:32,0:47:99:235,0,336	1/1:6,8:21:18.53:534,19,0	1/1:3,1:20:9.89:181,10,0	1/1:4,1:25:8.66:181,9,0	0/0:24,0:24:59.82:0,60,525	0/0:19,0:19:35.44:0,35,333	0/0:41,0:41:55.94:0,56,670	0/0:8,0:26:3.01:0,3,33	1/1:23,0:23:41.96:457,42,0	1/1:5,32:40:10:349,10,0	0/1:16,0:23:12.72:13,0,186	1/1:28,0:28:63.87:642,64,0	1/1:3,1:15:11.18:219,11,0	1/1:2,0:1:3:26,3,0
chr10	9610218	.	CA	C	12995.41	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=7.261;DP=592;FS=1.377;HRun=7;HaplotypeScore=78.1859;InbreedingCoeff=0.9906;MQ=75.29;MQ0=0;MQRankSum=-4.079;QD=26.52;ReadPosRankSum=4.504;VQSLOD=5.4025;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,38:39:90.20:918,90,0	1/1:0,9:9:27.06:275,27,0	0/0:19,0:20:51.14:0,51,596	0/0:21,0:21:44.56:0,45,504	1/1:3,17:20:51.11:520,51,0	1/1:1,16:17:42.09:428,42,0	1/1:2,16:18:48.11:490,48,0	1/1:4,21:25:63.13:636,63,0	1/1:2,23:25:60.13:612,60,0	1/1:0,23:23:69.16:704,69,0	1/1:2,7:9:18.04:183,18,0	1/1:1,28:29:81.18:826,81,0	1/1:3,14:17:45.02:445,45,0	1/1:2,22:24:63.14:643,63,0	1/1:3,26:29:69.16:704,69,0	1/1:1,31:32:90.20:918,90,0	1/1:1,26:27:78.18:796,78,0	1/1:1,10:11:30.06:306,30,0	0/0:24,0:24:63.20:0,63,792	0/0:19,0:19:57.17:0,57,704	0/0:18,0:18:51.15:0,51,628	1/1:4,18:22:54.12:550,54,0	1/1:2,18:20:54.12:549,54,0	1/1:2,20:22:57.12:582,57,0	1/1:0,24:24:69.16:704,69,0	1/1:4,23:27:34.38:653,34,0	1/1:2,15:17:42.10:428,42,0	1/1:0,4:4:12.03:122,12,0
chr10	9610347	.	CACACACACACACAT	C	4301.46	PASS	AB=0.990;AC=34;AF=0.607;AN=56;BaseQRankSum=-2.355;DP=578;FS=9.905;HRun=0;HaplotypeScore=217.6876;InbreedingCoeff=-0.3886;MQ=59.43;MQ0=17;MQRankSum=-0.883;QD=8.19;ReadPosRankSum=-0.440;VQSLOD=2.7033;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:36,0:36:99:230,0,219	1/1:11,0:11:14.97:156,15,0	0/0:36,0:11:11.18:0,11,136	0/1:37,0:17:15.58:16,0,96	1/1:14,0:14:0.57:119,1,0	0/1:14,0:13:7.23:73,0,7	0/1:19,0:19:52.13:199,0,52	1/1:31,0:28:33.35:353,33,0	0/0:6,11:17:2.68:0,3,11	0/1:19,0:18:81.27:81,0,127	0/1:8,0:8:8.28:8,0,71	1/1:23,0:22:5.96:126,6,0	0/1:27,1:28:60.91:238,0,61	0/1:20,0:20:6.21:190,0,6	0/1:19,0:19:99:104,0,115	1/1:22,1:23:4.42:424,4,0	1/1:22,0:22:8.24:306,8,0	0/1:14,0:13:99:111,0,136	0/1:16,0:16:46.89:47,0,177	0/1:27,0:27:86.40:203,0,86	0/1:47,0:45:99:225,0,236	0/1:17,0:17:11.36:144,0,11	0/1:20,0:19:0.72:145,0,1	0/1:22,0:22:99:158,0,145	1/1:8,0:8:17.92:142,18,0	1/1:11,0:11:12.88:175,13,0	0/1:13,0:13:26.35:176,0,26	0/1:5,1:6:31.58:155,0,32
chr10	9610349	.	CACACACACACAT	C	5210.40	PASS	AB=0.934;AC=37;AF=0.661;AN=56;BaseQRankSum=-2.197;DP=565;FS=4.682;HRun=0;HaplotypeScore=192.9172;InbreedingCoeff=-0.1318;MQ=58.50;MQ0=17;MQRankSum=-1.062;QD=10.46;ReadPosRankSum=-1.473;VQSLOD=3.5240;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:35,0:35:99:262,0,143	1/1:11,0:11:15:245,15,0	0/0:35,0:10:4.34:0,4,97	0/1:37,0:17:16.96:17,0,94	1/1:14,0:14:3.06:122,3,0	0/1:12,0:11:3.29:73,0,3	0/1:19,0:19:16.19:228,0,16	1/1:29,0:26:52.76:397,53,0	0/0:16,0:16:2.60:0,3,10	0/1:18,0:17:30.11:142,0,30	1/1:8,0:8:12.67:94,13,0	1/1:5,18:22:5.96:215,6,0	0/1:7,21:28:67.25:236,0,67	0/1:5,14:19:5.13:207,0,5	0/1:18,0:18:86.81:138,0,87	1/1:17,5:22:38.51:645,39,0	1/1:22,0:22:44.90:426,45,0	0/1:14,0:13:95.35:180,0,95	0/0:16,0:16:7.54:0,8,171	0/1:27,0:27:99:113,0,106	0/1:48,0:46:42.50:42,0,305	1/1:14,2:16:5.48:173,5,0	1/1:20,0:19:29.89:256,30,0	0/1:22,0:22:99:158,0,105	1/1:8,0:8:17.92:142,18,0	1/1:2,8:10:15.01:308,15,0	1/1:11,1:12:2.66:249,3,0	0/1:6,0:6:1.60:142,0,2
chr10	9610359	.	CAT	C	5307.94	PASS	AB=1.000;AC=43;AF=0.768;AN=56;BaseQRankSum=-2.406;DP=565;FS=4.453;HRun=0;HaplotypeScore=122.0931;InbreedingCoeff=0.5760;MQ=51.48;MQ0=23;MQRankSum=-0.205;QD=12.01;ReadPosRankSum=-2.410;VQSLOD=3.7635;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:38,1:39:57.96:529,58,0	1/1:10,1:10:14.94:116,15,0	0/0:31,0:6:4.34:0,4,97	0/1:32,0:12:23.91:24,0,92	1/1:18,0:18:29.81:236,30,0	1/1:15,0:14:14.79:112,15,0	1/1:30,0:30:62.78:509,63,0	1/1:23,0:20:56.70:442,57,0	0/0:12,0:12:1.55:0,2,4	1/1:20,0:19:53.77:441,54,0	0/1:11,0:11:2.78:55,0,3	1/1:19,0:18:5.82:39,6,0	0/1:25,0:25:22.94:24,0,23	1/1:18,0:18:14.82:103,15,0	1/1:16,0:15:38.84:304,39,0	1/1:25,0:24:56.68:432,57,0	1/1:27,0:26:15.27:294,15,0	1/1:13,0:12:10.02:146,10,0	0/0:14,0:14:31.91:0,32,273	0/0:25,0:25:18.47:0,18,163	0/0:39,2:39:34.31:0,34,437	1/1:17,0:17:29.94:243,30,0	1/1:16,1:16:32.93:266,33,0	1/1:26,0:26:33.62:369,34,0	1/1:10,0:9:20.92:167,21,0	1/1:9,0:8:14.90:109,15,0	1/1:15,0:15:36.71:276,37,0	1/1:6,0:6:1.78:75,2,0
chr10	9610361	.	TACACACACACACAC	T	1766.44	PASS	AB=0.974;AC=15;AF=0.268;AN=56;BaseQRankSum=3.060;DP=593;FS=2.302;HRun=0;HaplotypeScore=221.2973;InbreedingCoeff=0.0586;MQ=51.18;MQ0=24;MQRankSum=-1.125;QD=7.07;ReadPosRankSum=0.720;VQSLOD=2.8219;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:40:19.40:0,19,573	0/1:13,0:12:20.56:38,0,21	0/0:31,0:6:3.01:0,3,39	0/0:31,0:12:2.22:0,2,7	0/0:19,0:19:12.04:0,12,219	0/0:16,0:15:8.95:0,9,89	0/0:30,0:30:31.54:0,32,568	0/0:23,0:20:16.06:0,16,136	0/0:14,0:14:3.45:0,3,23	0/0:21,0:20:32.16:0,32,533	0/0:10,0:10:12.04:0,12,182	1/1:21,0:20:5.52:90,6,0	0/1:27,0:27:99:185,0,144	0/1:20,0:20:52.45:131,0,52	0/0:17,0:16:27.06:0,27,448	0/1:24,0:23:99:226,0,100	0/1:30,0:29:74.03:74,0,119	0/0:16,0:15:11.14:0,11,234	0/1:9,4:13:9.42:136,0,9	1/1:7,18:25:11.81:295,12,0	1/1:45,0:43:9.64:536,10,0	0/0:17,0:17:9.01:0,9,110	0/0:19,0:18:11.96:0,12,119	0/0:27,0:27:5.93:0,6,369	0/0:11,0:10:6:0,6,56	0/1:9,0:8:12.66:82,0,13	0/1:16,0:16:43.29:43,0,136	0/1:7,0:7:91.19:91,0,96
chr10	9610886	.	C	CA	303.76	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-3.786;DP=493;FS=9.895;HRun=9;HaplotypeScore=53.3406;InbreedingCoeff=0.7326;MQ=81.36;MQ0=0;MQRankSum=-0.977;QD=15.99;ReadPosRankSum=-0.564;VQSLOD=2.6674;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:47.99:0,48,416	0/0:6,0:6:15:0,15,130	0/0:22,0:16:6.69:0,7,161	0/0:17,0:14:5.30:0,5,90	0/0:33,1:34:62.76:0,63,765	0/0:20,0:20:50.97:0,51,439	0/0:12,0:12:32.97:0,33,282	0/0:32,0:32:89.96:0,90,776	0/0:0,0:9:16.30:0,16,48	0/0:17,0:17:47.98:0,48,415	0/0:21,0:21:59.98:0,60,520	0/0:13,0:13:29.98:0,30,260	0/0:21,0:21:41.97:0,42,364	0/0:11,0:11:26.99:0,27,234	1/1:1,18:19:36.10:398,36,0	0/0:13,0:15:40.05:0,40,320	0/0:13,0:13:32.97:0,33,280	0/0:17,0:17:47.95:0,48,415	0/0:23,0:23:56.96:0,57,492	0/0:23,0:23:56.96:0,57,491	0/0:9,0:9:23.99:0,24,208	0/0:18,0:18:50.99:0,51,443	0/0:20,0:20:53.99:0,54,468	0/0:7,0:7:17.99:0,18,156	0/0:17,0:17:38.98:0,39,339	0/0:21,1:23:56:0,56,475	0/0:35,0:35:95.91:0,96,822	0/0:3,0:3:6:0,6,52
chr10	9611648	.	G	GT	9399.28	PASS	AB=0.735;AC=34;AF=0.607;AN=56;BaseQRankSum=-14.770;DP=688;FS=2.157;HRun=10;HaplotypeScore=68.4998;InbreedingCoeff=0.8322;MQ=73.47;MQ0=0;MQRankSum=-0.423;QD=22.54;ReadPosRankSum=-0.333;VQSLOD=5.5638;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,1:32:56.94:0,57,664	1/1:3,17:20:26.49:487,26,0	0/0:18,0:19:23.92:0,24,194	0/0:9,0:11:19.77:0,20,133	0/0:44,2:46:81.85:0,82,879	0/0:29,2:31:16.83:0,17,543	0/0:18,1:20:6.08:0,6,238	1/1:5,19:24:57.07:579,57,0	0/0:29,1:30:54.89:0,55,654	1/1:6,28:34:62.54:854,63,0	1/1:2,28:30:56.37:756,56,0	1/1:3,16:20:23.31:437,23,0	1/1:3,31:34:56.56:807,57,0	1/1:1,28:29:75.15:788,75,0	1/1:1,21:22:57.14:608,57,0	1/1:5,16:21:20.94:424,21,0	1/1:5,21:26:38.51:615,39,0	0/1:4,9:13:16.22:244,0,16	0/1:18,3:22:20.03:20,0,255	0/0:38,0:39:99:0,107,868	0/0:13,0:13:26.95:0,27,222	1/1:2,20:23:54.14:576,54,0	1/1:7,16:24:31.54:475,32,0	1/1:1,7:8:21.05:224,21,0	0/0:30,0:30:77.88:0,78,635	1/1:3,24:27:53.15:731,53,0	1/1:7,24:31:32.51:551,33,0	1/1:1,8:9:21.05:224,21,0
chr10	9612391	.	GA	G	701.96	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.061;DP=671;FS=1.419;HRun=9;HaplotypeScore=68.2001;InbreedingCoeff=0.9802;MQ=76.00;MQ0=0;MQRankSum=-1.379;QD=18.00;ReadPosRankSum=1.020;VQSLOD=3.9261;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:96.24:0,96,1075	0/0:11,0:11:27.07:0,27,303	0/0:20,0:19:44.93:0,45,477	0/0:17,0:16:11.81:0,12,337	0/0:32,0:32:93.28:0,93,1073	0/0:28,0:28:78.22:0,78,892	0/0:17,0:17:48.14:0,48,551	0/0:46,0:46:99:0,108,1205	1/1:2,19:21:54.03:494,54,0	0/0:41,0:41:84.14:0,84,943	0/0:30,0:30:90.26:0,90,1029	0/0:24,0:24:60.17:0,60,682	0/0:21,0:21:63.09:0,63,701	0/0:20,0:20:27.33:0,27,525	1/1:3,15:18:36.02:329,36,0	0/0:27,0:27:78.23:0,78,900	0/0:22,0:22:63.19:0,63,727	0/0:11,0:11:30:0,30,315	0/0:24,0:24:60.16:0,60,675	0/0:22,0:22:63.19:0,63,725	0/0:17,0:17:48.14:0,48,554	0/0:29,0:29:87.25:0,87,995	0/0:35,0:35:78.23:0,78,897	0/0:7,0:7:21.05:0,21,231	0/0:26,1:27:44.76:0,45,769	0/0:25,0:25:69.20:0,69,788	0/0:31,0:31:87.25:0,87,996	0/0:16,0:16:48.14:0,48,554
chr10	9613176	.	CATACATAT	C	4651.61	PASS	AB=0.968;AC=23;AF=0.411;AN=56;BaseQRankSum=12.906;DP=713;FS=0.861;HRun=0;HaplotypeScore=173.9611;InbreedingCoeff=-0.0847;MQ=60.69;MQ0=3;MQRankSum=-11.261;QD=10.05;ReadPosRankSum=-3.176;VQSLOD=3.2467;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:7,27:34:6.62:90,0,7	0/1:11,0:11:48.42:237,0,48	0/0:22,0:14:29.23:0,29,346	0/0:20,0:11:17.21:0,17,216	1/1:4,30:34:27.02:640,27,0	1/1:1,18:19:24.01:551,24,0	1/1:7,23:30:5.95:51,6,0	0/0:34,0:33:86.51:0,87,708	0/0:31,0:31:57:0,57,767	0/1:29,0:29:99:425,0,265	0/1:21,0:21:99:301,0,171	0/1:19,0:19:46.45:46,0,264	0/1:26,0:26:99:138,0,428	0/1:27,1:28:99:358,0,262	0/0:36,0:36:99:0,105,2665	0/1:22,0:22:99:150,0,143	0/0:32,0:32:35.92:0,36,291	0/1:18,0:18:1.05:1,0,201	0/0:21,0:21:50.50:0,50,672	0/0:34,0:34:93.10:0,93,2271	0/0:20,0:20:54.01:0,54,1296	0/1:35,0:35:99:171,0,595	0/1:20,0:20:99:133,0,203	0/1:26,0:26:79.35:79,0,195	1/1:1,30:31:39.06:808,39,0	0/1:21,0:21:99:225,0,255	0/1:26,0:26:99:195,0,112	0/1:13,0:13:52.39:52,0,220
chr10	9613184	.	TATACATAC	T	5933.69	PASS	AB=0.745;AC=36;AF=0.692;AN=52;BaseQRankSum=5.970;DP=679;FS=9.924;HRun=0;HaplotypeScore=163.4567;InbreedingCoeff=0.5561;MQ=57.71;MQ0=3;MQRankSum=-7.667;QD=12.73;ReadPosRankSum=-0.817;VQSLOD=2.9440;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:32,0:32:1.07:67,0,1	1/1:2,6:8:15.52:352,16,0	./.	./.	1/1:31,0:31:24.08:489,24,0	1/1:19,0:19:21.07:412,21,0	1/1:24,0:24:2.90:16,3,0	0/0:33,0:31:0:0,0,0	0/0:32,0:32:18.05:0,18,415	1/1:13,14:28:39.01:754,39,0	1/1:8,10:18:18.06:442,18,0	1/1:13,5:18:6.02:126,6,0	0/1:11,4:26:99:283,0,135	1/1:17,11:28:21.07:504,21,0	0/0:38,0:39:75.24:0,75,2479	1/1:8,14:22:12.04:254,12,0	0/1:17,13:30:0:0,0,0	1/1:10,7:17:1.73:52,2,0	0/0:19,0:19:12.04:0,12,440	0/0:34,0:34:54.19:0,54,1920	0/0:19,0:19:30.10:0,30,1089	0/1:16,10:35:99:302,0,260	1/1:8,10:18:8.75:223,9,0	1/1:16,9:25:6.02:149,6,0	1/1:30,0:30:35.85:580,36,0	1/1:12,11:23:33.03:505,33,0	1/1:6,18:24:11.67:297,12,0	1/1:8,2:10:6.02:127,6,0
chr10	9613215	.	A	ACATACATG	426.64	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-0.833;DP=618;FS=0.000;HRun=0;HaplotypeScore=181.7088;InbreedingCoeff=0.7709;MQ=54.08;MQ0=3;MQRankSum=-1.269;QD=15.80;ReadPosRankSum=1.072;VQSLOD=2.4404;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:30:32.99:0,33,320	0/0:8,0:8:15.35:0,15,266	0/0:15,0:7:15.01:0,15,154	0/0:10,0:6:4.33:0,4,103	0/0:33,0:33:57.01:0,57,735	0/0:16,0:16:32.92:0,33,469	0/0:25,0:25:33.81:0,34,272	0/0:33,0:31:74.75:0,75,619	1/1:3,22:27:12.04:512,12,0	0/0:28,0:28:64.01:0,64,772	0/0:18,0:18:33.84:0,34,442	0/0:16,0:16:27.40:0,27,254	0/0:22,0:22:46.43:0,46,702	0/0:24,0:24:42.38:0,42,552	0/0:33,0:33:93.21:0,93,1833	0/0:21,0:21:27.94:0,28,298	0/0:28,0:28:23.97:0,24,266	0/0:13,0:13:8.39:0,8,48	0/0:13,0:11:33.02:0,33,466	0/0:31,0:31:90.10:0,90,1556	0/0:17,0:17:42.07:0,42,806	0/0:28,0:28:60.65:0,61,858	0/0:19,0:19:32.65:0,33,373	0/0:25,0:25:26.99:0,27,292	0/0:31,0:31:52.90:0,53,765	0/0:17,0:17:37.56:0,38,429	0/0:24,0:24:29.98:0,30,384	0/0:12,0:12:30.19:0,30,239
chr10	9613789	.	AAG	A	22618.74	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=15.063;DP=684;FS=17.589;HRun=0;HaplotypeScore=142.4092;InbreedingCoeff=0.9963;MQ=73.66;MQ0=0;MQRankSum=-6.046;QD=44.18;ReadPosRankSum=2.352;VQSLOD=4.4169;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,37:37:96.33:1565,96,0	1/1:0,8:8:21.07:342,21,0	0/0:18,0:19:53.99:0,54,854	0/0:7,0:7:15.05:0,15,305	1/1:0,35:35:93.32:1503,93,0	1/1:0,30:30:72.25:1175,72,0	1/1:0,21:21:60.20:978,60,0	1/1:0,22:22:66.21:1047,66,0	0/0:20,0:20:60.21:0,60,1217	1/1:0,21:21:63.21:1020,63,0	1/1:0,28:28:75.25:1190,75,0	1/1:0,25:25:72.24:1159,72,0	1/1:0,27:27:69.19:1096,69,0	1/1:0,26:26:75.26:1221,75,0	0/0:35,0:35:99:0,105,2133	1/1:0,23:23:66.23:1076,66,0	1/1:0,22:22:60.20:978,60,0	1/1:0,17:17:39.13:636,39,0	0/0:20,0:20:54.19:0,54,1096	0/0:36,0:36:99:0,108,2192	0/0:34,0:34:99:0,102,2069	1/1:0,29:29:84.29:1369,84,0	1/1:0,24:24:69.24:1125,69,0	1/1:0,19:19:45.15:734,45,0	1/1:0,28:28:78.27:1272,78,0	1/1:1,28:29:84.29:1360,84,0	1/1:0,29:29:75.25:1186,75,0	1/1:0,12:12:36.12:587,36,0
chr10	9614214	.	CT	C	2866.01	PASS	AB=0.618;AC=46;AF=0.821;AN=56;BaseQRankSum=-2.010;DP=272;FS=11.110;HRun=12;HaplotypeScore=39.4856;InbreedingCoeff=0.2010;MQ=88.40;MQ0=0;MQRankSum=-2.995;QD=12.25;ReadPosRankSum=4.555;VQSLOD=1.9638;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:4,9:14:56.22:157,0,56	1/1:1,4:5:8.97:70,9,0	0/0:20,0:15:22.20:0,22,234	0/0:17,1:9:3.36:0,3,80	1/1:2,10:12:29.87:232,30,0	0/1:7,9:17:1.36:163,0,1	1/1:1,8:9:23.88:186,24,0	1/1:5,5:12:21.60:137,22,0	0/1:4,2:6:14.22:14,0,52	0/1:3,4:7:18.50:58,0,19	1/1:3,8:13:25.17:185,25,0	1/1:1,4:6:8:52,8,0	1/1:0,5:6:16.98:122,17,0	1/1:3,4:7:11.93:93,12,0	1/1:1,8:9:20.91:163,21,0	1/1:2,3:5:8.78:69,9,0	1/1:4,6:12:21.99:151,22,0	1/1:1,5:6:14.91:112,15,0	1/1:2,0:6:6.10:18,6,0	1/1:5,0:13:14.24:41,14,0	1/1:2,0:8:12.22:35,12,0	1/1:2,6:8:17.92:139,18,0	1/1:3,4:7:11.95:93,12,0	0/1:2,7:9:9.53:118,0,10	1/1:3,8:11:23.89:186,24,0	1/1:4,7:11:17.89:137,18,0	1/1:0,9:9:23.91:186,24,0	0/1:1,5:6:12.14:98,0,12
chr10	9616521	.	TC	T	4013.55	PASS	AB=0.735;AC=15;AF=0.300;AN=50;BaseQRankSum=-4.729;DP=677;FS=80.794;HRun=1;HaplotypeScore=128.4426;InbreedingCoeff=0.1290;MQ=60.64;MQ0=68;MQRankSum=-11.318;QD=14.59;ReadPosRankSum=3.074;VQSLOD=0.3431;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,20:19:57.19:796,57,0	0/1:12,3:15:83.47:83,0,485	0/0:66,0:32:86.44:0,86,1214	0/0:48,0:23:34.76:0,35,734	1/1:7,9:16:27.05:352,27,0	0/1:8,11:19:99:410,0,232	1/1:8,10:10:30.10:419,30,0	0/0:59,0:30:87.25:0,87,1362	./.	0/1:28,7:33:99:194,0,1090	0/1:19,11:30:99:376,0,730	0/0:21,0:21:54.18:0,54,862	0/0:21,0:21:51.17:0,51,814	0/0:23,0:22:60.20:0,60,958	0/1:15,9:23:99:317,0,467	0/1:18,6:22:99:180,0,745	0/1:31,14:43:99:463,0,1170	0/1:12,8:20:99:275,0,511	0/0:20,0:3:6.02:0,6,95	./.	./.	0/0:19,0:18:54.18:0,54,862	0/0:29,0:25:69.24:0,69,1095	0/0:30,0:30:86.47:0,86,1314	0/1:2,5:6:76.12:149,0,76	0/0:26,0:25:66.22:0,66,1055	0/0:24,0:24:72.25:0,72,1150	0/0:6,0:6:18.06:0,18,288
chr10	9616777	.	AC	A	18951.74	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=4.047;DP=676;FS=0.583;HRun=5;HaplotypeScore=162.8030;InbreedingCoeff=0.9161;MQ=84.84;MQ0=0;MQRankSum=-10.898;QD=30.27;ReadPosRankSum=7.197;VQSLOD=2.2786;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,25:26:72.21:816,72,0	1/1:0,11:11:27.08:306,27,0	0/0:28,0:27:69.37:0,69,917	0/0:22,0:22:57.17:0,57,735	1/1:1,20:21:57.16:646,57,0	1/1:2,25:27:66.19:748,66,0	1/1:1,18:19:48.14:544,48,0	1/1:1,27:28:78.22:883,78,0	1/1:0,21:20:57.16:646,57,0	1/1:1,27:28:81.23:917,81,0	1/1:0,24:24:69.20:783,69,0	1/1:2,18:20:57.16:641,57,0	1/1:0,29:29:78.22:884,78,0	1/1:1,27:28:72.21:816,72,0	1/1:5,38:43:99:1218,108,0	1/1:1,29:30:75.21:850,75,0	1/1:0,24:24:66.19:749,66,0	1/1:0,17:17:48.14:544,48,0	1/1:3,15:18:45.13:510,45,0	1/1:0,24:24:69.20:782,69,0	1/1:1,33:34:93.26:1055,93,0	1/1:1,34:35:93.26:1054,93,0	1/1:0,20:20:60.17:680,60,0	1/1:1,13:14:36.10:408,36,0	1/1:3,27:30:81.23:918,81,0	1/1:1,28:28:78.22:884,78,0	1/1:0,24:24:57.12:632,57,0	1/1:1,1:2:3.01:34,3,0
chr10	9617749	.	T	TTG	20689.86	PASS	AB=0.611;AC=35;AF=0.625;AN=56;BaseQRankSum=3.744;DP=854;FS=2.562;HRun=0;HaplotypeScore=147.5327;InbreedingCoeff=0.3831;MQ=66.49;MQ0=8;MQRankSum=0.743;QD=31.35;ReadPosRankSum=3.302;VQSLOD=6.9327;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:16,37:54:79.34:1708,79,0	0/1:2,11:13:3.08:439,0,3	0/0:50,0:29:44.49:0,44,492	0/0:49,0:31:37.57:0,38,403	1/1:6,25:33:21.16:971,21,0	1/1:6,18:24:14.77:714,15,0	0/1:9,22:31:0.52:981,0,1	0/1:25,24:50:50.84:1131,0,51	0/0:27,0:27:66.20:0,66,801	1/1:13,25:39:47.87:1245,48,0	1/1:4,21:25:29.82:979,30,0	1/1:4,14:19:28:615,28,0	1/1:5,29:34:47.88:1260,48,0	1/1:8,28:36:87.29:1376,87,0	0/1:11,21:32:43.01:806,0,43	1/1:11,19:31:29.80:929,30,0	1/1:9,18:27:55.07:873,55,0	0/1:9,5:15:53.89:314,0,54	0/0:18,0:19:35.93:0,36,399	0/0:20,0:20:54.17:0,54,655	0/0:25,1:27:23.61:0,24,754	0/1:7,15:23:15.63:741,0,16	0/1:13,23:36:30.95:997,0,31	1/1:5,22:27:63.21:1007,63,0	0/1:9,26:36:30.96:1024,0,31	1/1:10,23:33:75.24:1177,75,0	0/1:8,21:29:3.56:918,0,4	1/1:3,10:13:30.10:484,30,0
chr10	9619419	.	CT	C	4536.48	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-0.001;DP=530;FS=1.583;HRun=9;HaplotypeScore=66.9666;InbreedingCoeff=0.9889;MQ=68.37;MQ0=1;MQRankSum=1.487;QD=21.92;ReadPosRankSum=2.464;VQSLOD=5.8324;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,19:20:32.73:445,33,0	0/0:11,0:11:33.10:0,33,381	0/0:14,0:14:29.98:0,30,315	0/0:11,0:11:30.08:0,30,330	1/1:2,29:31:75.01:686,75,0	1/1:3,21:24:57.03:522,57,0	1/1:0,6:6:12.01:110,12,0	0/0:30,0:30:78.67:0,79,876	1/1:3,17:20:42.02:384,42,0	0/0:29,0:29:81.23:0,81,926	0/0:34,0:35:99:0,99,1114	0/0:11,0:11:30.07:0,30,335	0/0:28,0:28:84.24:0,84,960	0/0:8,0:8:21.06:0,21,240	1/1:1,23:24:63.03:577,63,0	0/0:17,0:17:19.75:0,20,415	0/0:11,0:11:33.10:0,33,381	0/0:21,0:21:48.14:0,48,554	1/1:2,12:14:36.02:329,36,0	1/1:3,31:34:81.03:741,81,0	1/1:1,12:13:30.02:275,30,0	0/0:13,0:13:39.12:0,39,450	0/0:21,0:21:63.19:0,63,727	0/0:4,0:4:12.04:0,12,138	1/1:3,18:21:51.03:467,51,0	0/0:19,0:19:39.12:0,39,450	0/0:20,0:20:54.13:0,54,601	0/0:19,0:19:51.15:0,51,587
chr10	9620333	.	G	GCA	4118.97	PASS	AB=0.930;AC=14;AF=0.259;AN=54;BaseQRankSum=-0.360;DP=656;FS=12.848;HRun=0;HaplotypeScore=140.0877;InbreedingCoeff=0.4942;MQ=55.77;MQ0=13;MQRankSum=1.516;QD=19.07;ReadPosRankSum=-4.716;VQSLOD=2.2198;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:40,8:46:8.86:1046,9,0	0/1:11,0:11:9.39:9,0,78	./.	0/0:26,0:13:8.50:0,8,69	1/1:10,10:18:30.10:491,30,0	1/1:20,7:27:16.36:750,16,0	1/1:20,7:27:18.84:823,19,0	0/0:26,0:24:35.20:0,35,575	0/1:20,0:20:14.79:15,0,338	0/0:26,0:26:28.58:0,29,699	0/0:20,0:19:11.80:0,12,326	0/1:24,0:24:13.39:13,0,183	0/0:25,0:25:0.41:0,0,518	0/0:25,0:25:23.06:0,23,468	0/1:11,7:18:15.05:382,0,15	0/0:16,0:16:26.92:0,27,312	0/0:25,0:25:57.14:0,57,688	0/0:27,0:27:20.57:0,21,635	0/0:19,0:17:41.16:0,41,471	0/0:26,0:26:40.68:0,41,601	0/0:45,0:45:99:0,99,1187	0/0:15,0:15:5.73:0,6,173	0/0:18,0:18:9.80:0,10,234	0/0:33,0:33:21.19:0,21,498	1/1:16,5:21:4.33:590,4,0	0/0:31,0:31:19.57:0,20,754	0/0:18,0:18:11.74:0,12,336	0/0:4,0:4:9.02:0,9,102
chr10	9620354	.	G	GACACACACAC	7054.85	PASS	AB=0.834;AC=40;AF=0.769;AN=52;BaseQRankSum=-3.549;DP=707;FS=1.383;HRun=0;HaplotypeScore=232.0569;InbreedingCoeff=-0.0532;MQ=49.07;MQ0=17;MQRankSum=-1.389;QD=11.01;ReadPosRankSum=-0.860;VQSLOD=3.1590;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:39,0:48:99:156,0,356	1/1:13,3:16:18.03:355,18,0	./.	0/0:26,0:4:2.88:0,3,15	1/1:16,0:19:6.31:57,6,0	0/1:24,0:27:99:139,0,238	0/1:28,0:32:92.10:92,0,177	1/1:23,0:21:17.77:123,18,0	1/1:19,1:21:12.85:181,13,0	1/1:28,0:28:12.93:475,13,0	./.	1/1:14,14:29:6.02:298,6,0	1/1:24,0:25:41.89:826,42,0	1/1:25,1:25:26.85:315,27,0	0/1:9,0:21:25.71:26,0,64	1/1:20,2:22:19.89:478,20,0	1/1:28,0:28:10.48:199,10,0	1/1:29,0:29:28:356,28,0	0/1:13,0:15:20.35:151,0,20	0/1:18,0:23:24.55:158,0,25	0/1:40,0:48:21.30:343,0,21	1/1:14,1:15:2.88:92,3,0	1/1:25,1:26:29.98:438,30,0	1/1:31,0:32:30.05:591,30,0	0/1:23,0:26:78.35:78,0,340	1/1:34,0:35:27.03:523,27,0	1/1:15,2:18:23.99:604,24,0	0/0:6,0:6:0.81:0,1,5
chr10	9620445	.	A	AC	26434.57	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-5.530;DP=669;FS=3.055;HRun=1;HaplotypeScore=63.5362;InbreedingCoeff=0.9834;MQ=75.55;MQ0=0;MQRankSum=-7.393;QD=41.24;ReadPosRankSum=4.690;VQSLOD=5.3007;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,46:48:99:2004,135,0	1/1:0,9:9:27.09:405,27,0	0/0:12,0:12:25.61:0,26,288	0/0:16,0:16:12.26:0,12,323	1/1:2,19:21:57.19:853,57,0	1/1:1,26:27:75.25:1124,75,0	1/1:4,24:28:69.23:1030,69,0	1/1:0,30:30:87.22:1246,87,0	1/1:1,26:27:75.25:1113,75,0	1/1:2,23:25:69.23:1033,69,0	1/1:0,20:20:60.20:898,60,0	1/1:1,17:18:51.17:762,51,0	1/1:0,26:26:72.24:1078,72,0	1/1:1,23:24:63.21:943,63,0	1/1:0,28:28:84.28:1259,84,0	1/1:0,18:18:48.16:718,48,0	1/1:0,30:30:87.29:1303,87,0	1/1:0,24:24:54.18:809,54,0	1/1:0,28:28:84.25:1214,84,0	1/1:0,14:14:42.14:629,42,0	1/1:2,40:40:99:1661,111,0	1/1:0,14:14:42.14:629,42,0	1/1:1,16:17:48.16:718,48,0	1/1:0,23:23:63.18:919,63,0	1/1:1,19:20:54.18:809,54,0	1/1:1,36:37:99:1615,108,0	1/1:0,23:23:69.23:1033,69,0	1/1:1,19:20:42.14:630,42,0
chr10	9620569	.	A	ACCGAGAAT	17992.56	PASS	AB=0.636;AC=31;AF=0.554;AN=56;BaseQRankSum=-12.310;DP=548;FS=1.215;HRun=0;HaplotypeScore=161.4994;InbreedingCoeff=0.8917;MQ=93.49;MQ0=0;MQRankSum=-14.167;QD=71.68;ReadPosRankSum=-2.365;VQSLOD=4.6316;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,132,3420	1/1:3,3:6:9.03:278,9,0	0/0:22,0:22:53.96:0,54,1243	0/0:35,0:35:53.06:0,53,1437	0/0:9,0:9:24.08:0,24,611	0/0:20,0:20:48.12:0,48,1115	0/0:28,0:28:69.21:0,69,1699	1/1:13,13:28:69.23:2181,69,0	0/0:26,0:26:66.15:0,66,1527	1/1:8,12:20:50.97:1398,51,0	1/1:1,7:9:20.92:670,21,0	1/1:6,11:17:39.13:1609,39,0	1/1:9,11:22:36.12:1494,36,0	1/1:4,13:18:33.11:1366,33,0	0/0:34,0:34:90.21:0,90,2127	0/1:12,14:28:19.92:2297,0,20	1/1:5,8:14:21.07:873,21,0	1/1:4,4:8:9.03:384,9,0	0/0:23,0:23:45.13:0,45,1013	0/0:11,0:11:30.10:0,30,799	0/0:24,0:24:63.22:0,63,1682	1/1:3,7:13:15.05:544,15,0	1/1:4,5:10:15:636,15,0	1/1:3,11:17:21.07:688,21,0	0/0:14,0:14:36.12:0,36,927	1/1:3,16:22:66.19:2326,66,0	1/1:6,8:16:30.03:1025,30,0	1/1:0,3:3:6.02:223,6,0
chr10	9620823	.	G	GTGCC	2884.38	PASS	AB=1.000;AC=40;AF=0.833;AN=48;BaseQRankSum=-0.166;DP=408;FS=0.000;HRun=0;HaplotypeScore=121.2240;InbreedingCoeff=0.3150;MQ=72.59;MQ0=7;MQRankSum=2.032;QD=9.49;ReadPosRankSum=0.217;VQSLOD=2.8419;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,0:9:3.48:58,3,0	./.	0/0:41,0:28:3.01:0,3,42	0/0:32,0:21:8.57:0,9,106	./.	1/1:13,0:13:5.87:39,6,0	1/1:37,0:37:28.03:309,28,0	1/1:10,0:10:3:27,3,0	1/1:9,1:10:12.04:248,12,0	0/0:8,0:8:2.24:0,2,5	1/1:7,0:7:0.47:1,0,0	1/1:14,0:14:17.69:184,18,0	1/1:12,0:12:4.22:67,4,0	1/1:12,0:12:3.87:35,4,0	1/1:14,0:14:5.48:76,5,0	0/1:11,0:11:3.62:49,0,4	1/1:25,0:25:25.34:290,25,0	1/1:26,0:27:29.16:459,29,0	./.	1/1:5,0:5:5.97:69,6,0	1/1:27,3:29:29.95:607,30,0	1/1:6,0:6:3:25,3,0	./.	1/1:30,0:30:22.22:239,22,0	1/1:9,0:9:3.48:39,3,0	0/1:7,0:7:4.49:56,0,4	1/1:10,0:9:8.85:97,9,0	1/1:6,0:6:2.99:24,3,0
chr10	9622315	.	CTCAGCTTCATCTTGCAA	C	26516.01	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=17.882;DP=615;FS=2.852;HRun=0;HaplotypeScore=297.0950;InbreedingCoeff=0.9931;MQ=82.60;MQ0=0;MQRankSum=-17.100;QD=93.37;ReadPosRankSum=5.133;VQSLOD=4.3717;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,120,8811	1/1:0,8:8:21.07:1055,21,0	0/0:21,0:21:63.22:0,63,3597	0/0:22,0:22:60.20:0,60,3488	0/0:26,0:26:78.27:0,78,6109	0/0:28,0:28:84.29:0,84,6569	0/0:30,0:30:87.28:0,87,6572	1/1:11,14:25:42.08:1303,42,0	0/0:31,0:31:93.32:0,93,6666	1/1:9,16:25:48.16:2223,48,0	1/1:3,12:15:24.08:1205,24,0	1/1:2,15:17:39.13:1959,39,0	1/1:3,19:22:51.17:2562,51,0	1/1:1,11:12:24.08:1206,24,0	0/0:30,0:30:90.30:0,90,6649	1/1:4,18:22:51.17:2562,51,0	1/1:5,13:18:30.10:1507,30,0	1/1:5,6:11:12.04:603,12,0	0/0:24,0:24:72.25:0,72,5188	0/0:21,0:21:63.22:0,63,4898	0/0:34,0:34:99:0,99,7347	1/1:5,19:24:57.20:2822,57,0	1/1:1,13:14:30.10:1507,30,0	1/1:3,17:20:18.06:904,18,0	0/0:24,0:24:72.25:0,72,6050	1/1:5,12:17:36.11:1684,36,0	1/1:3,20:23:42.14:2058,42,0	1/1:1,10:11:27.09:1356,27,0
chr10	9622908	.	GTTT	G	4677.82	PASS	AB=0.583;AC=32;AF=0.571;AN=56;BaseQRankSum=-4.087;DP=534;FS=4.841;HRun=17;HaplotypeScore=88.2588;InbreedingCoeff=0.7737;MQ=76.84;MQ0=7;MQRankSum=-4.152;QD=16.59;ReadPosRankSum=2.588;VQSLOD=3.9722;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:16:23.96:0,24,228	1/1:0,6:6:11.99:123,12,0	0/0:55,0:26:14.48:0,14,285	0/0:29,0:17:3.07:0,3,150	0/0:11,0:29:58.11:0,58,585	0/0:10,0:28:25.67:0,26,368	0/0:4,0:12:18:0,18,208	1/1:10,11:25:20.22:355,20,0	0/0:11,0:15:1.51:0,2,231	1/1:9,15:24:16.58:360,17,0	1/1:1,15:20:23.94:283,24,0	1/1:6,12:19:25.49:408,25,0	1/1:4,5:10:14.77:143,15,0	1/1:1,9:13:29.90:280,30,0	0/1:4,1:14:14.37:14,0,46	0/1:6,14:21:66.91:299,0,67	1/1:3,9:13:19.58:213,20,0	1/1:7,12:21:36.93:383,37,0	0/0:8,0:13:19.21:0,19,183	0/0:7,0:17:41.46:0,41,405	0/0:5,0:10:8.97:0,9,68	1/1:2,12:15:19.82:350,20,0	1/1:3,11:16:22.55:230,23,0	1/1:1,7:8:20.95:215,21,0	0/0:7,0:23:40.16:0,40,372	1/1:9,13:22:38.73:383,39,0	1/1:5,20:26:28.69:483,29,0	1/1:1,4:8:16.47:156,16,0
chr10	9626142	.	GT	G	4866.12	PASS	AB=0.753;AC=36;AF=0.643;AN=56;BaseQRankSum=6.758;DP=451;FS=8.434;HRun=11;HaplotypeScore=54.4316;InbreedingCoeff=0.8079;MQ=83.63;MQ0=0;MQRankSum=-0.129;QD=16.50;ReadPosRankSum=1.680;VQSLOD=5.5071;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,2:35:46.93:0,47,899	1/1:1,8:9:17.98:148,18,0	0/0:9,0:10:0.69:0,1,84	0/1:18,0:18:0.29:0,0,107	0/0:17,0:17:39.06:0,39,393	0/0:15,2:17:11.32:0,11,310	0/0:20,0:20:57.10:0,57,590	1/1:5,21:26:59.74:468,60,0	1/1:1,13:15:29.01:228,29,0	1/1:5,10:15:26.93:217,27,0	1/1:4,11:15:4.70:165,5,0	1/1:4,18:22:15.91:337,16,0	1/1:1,11:12:26.97:222,27,0	1/1:1,17:18:44.94:369,45,0	1/1:1,15:16:38.95:320,39,0	1/1:0,9:9:26.97:222,27,0	1/1:2,22:24:62.92:517,63,0	1/1:2,11:13:29.96:246,30,0	0/0:11,1:13:14.22:0,14,314	0/0:12,0:12:33.05:0,33,327	0/0:18,2:20:23.48:0,23,455	0/1:2,8:10:16.14:84,0,16	1/1:3,15:18:41.88:345,42,0	1/1:1,15:16:44.93:369,45,0	0/0:12,0:12:21.03:0,21,206	1/1:3,8:11:23.41:173,23,0	1/1:2,16:18:9.96:288,10,0	1/1:1,8:9:17.98:148,18,0
chr10	9626734	.	AACTCTCT	A	21946.59	PASS	AB=0.526;AC=33;AF=0.589;AN=56;BaseQRankSum=20.036;DP=743;FS=3.663;HRun=0;HaplotypeScore=205.2232;InbreedingCoeff=0.9090;MQ=82.86;MQ0=0;MQRankSum=-19.502;QD=58.21;ReadPosRankSum=2.114;VQSLOD=4.8407;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,148,5763	1/1:1,8:9:24.08:615,24,0	0/0:26,0:26:72.23:0,72,2306	0/0:31,0:31:90.31:0,90,3194	0/0:30,0:30:87.30:0,87,3396	0/0:32,0:31:93.32:0,93,3583	0/0:33,0:33:96.33:0,96,3708	1/1:5,28:33:84.26:1942,84,0	0/0:25,0:25:69.22:0,69,2615	1/1:3,25:28:78.20:1855,78,0	1/1:4,17:21:45.15:1081,45,0	1/1:3,25:28:63.22:1613,63,0	1/1:0,27:27:63.22:1614,63,0	1/1:3,24:27:69.24:1697,69,0	1/1:2,27:29:72.25:1823,72,0	0/1:3,27:30:40.76:1826,0,41	1/1:5,13:18:27.09:692,27,0	1/1:2,5:7:6.02:154,6,0	0/0:26,0:26:75.26:0,75,2881	0/0:31,0:31:84.29:0,84,3271	0/0:39,0:39:99:0,117,4478	1/1:3,22:24:57.15:1378,57,0	1/1:3,26:29:69.16:1723,69,0	1/1:4,9:13:18.06:461,18,0	0/0:41,0:41:99:0,120,4680	1/1:1,24:25:72.21:1780,72,0	1/1:0,22:22:48.64:1230,49,0	1/1:0,6:6:18.06:461,18,0
chr10	9626995	.	CCCCT	C	29045.96	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=2.146;DP=740;FS=1.992;HRun=0;HaplotypeScore=167.4533;InbreedingCoeff=0.9993;MQ=85.27;MQ0=4;MQRankSum=-10.575;QD=42.59;ReadPosRankSum=8.818;VQSLOD=4.9613;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:0,25:25:54.19:993,54,0	1/1:2,12:14:33.11:600,33,0	0/0:29,0:29:63.68:0,64,1487	0/0:29,0:29:63.22:0,63,1463	1/1:1,32:32:81.28:1472,81,0	1/1:4,29:32:57.20:1048,57,0	1/1:2,24:26:57.13:1008,57,0	1/1:6,20:26:60.18:1032,60,0	1/1:28,1:29:78.18:1358,78,0	1/1:3,26:29:75.25:1344,75,0	1/1:2,18:20:54.19:977,54,0	1/1:4,15:19:30.10:552,30,0	1/1:1,21:22:54.19:989,54,0	1/1:2,25:27:60.21:1099,60,0	1/1:3,31:34:81.21:1449,81,0	1/1:0,24:24:69.24:1269,69,0	1/1:0,23:23:60.21:1099,60,0	1/1:1,12:13:30.10:552,30,0	1/1:0,19:19:54.09:887,54,0	1/1:1,27:27:72.25:1320,72,0	1/1:2,34:36:81.28:1490,81,0	1/1:0,25:25:54.19:993,54,0	1/1:5,26:31:69.04:1226,69,0	1/1:1,38:39:78.27:1435,78,0	1/1:2,31:32:69.24:1253,69,0	1/1:1,23:24:69.24:1264,69,0	1/1:1,31:32:75.05:1379,75,0	1/1:0,18:18:54.14:958,54,0
chr10	9627542	.	T	TA	283.01	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-0.676;DP=514;FS=0.000;HRun=6;HaplotypeScore=47.9695;InbreedingCoeff=0.9666;MQ=80.28;MQ0=0;MQRankSum=-2.306;QD=20.21;ReadPosRankSum=0.224;VQSLOD=2.7378;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:18.04:0,18,184	0/0:6,0:6:18:0,18,169	0/0:15,0:16:20.89:0,21,322	0/0:10,0:10:26.54:0,27,259	0/0:29,0:29:81.14:0,81,805	0/0:22,0:22:60.12:0,60,605	0/0:11,0:11:33.06:0,33,330	0/0:38,0:38:90.17:0,90,903	1/1:1,13:14:30.10:377,30,0	0/0:20,0:20:60.12:0,60,603	0/0:26,0:26:72.14:0,72,722	0/0:18,0:18:48.10:0,48,490	0/0:16,0:16:39.09:0,39,397	0/0:17,0:17:48.11:0,48,490	0/0:18,0:18:48.09:0,48,481	0/0:7,0:7:21.05:0,21,214	0/0:23,0:23:66.13:0,66,665	0/0:22,0:22:66.15:0,66,673	0/0:7,0:7:21.05:0,21,214	0/0:27,0:27:75.10:0,75,752	0/0:8,0:8:24.05:0,24,245	0/0:17,0:17:45.10:0,45,459	0/0:25,0:25:72.16:0,72,734	0/0:10,0:10:27.06:0,27,275	0/0:32,0:32:93.19:0,93,940	0/0:26,0:26:78.18:0,78,796	0/0:31,0:31:81.13:0,81,806	0/0:9,0:9:27.06:0,27,275
chr10	9627989	.	TA	T	1076.69	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.022;DP=755;FS=3.470;HRun=1;HaplotypeScore=80.5544;InbreedingCoeff=0.9981;MQ=70.58;MQ0=2;MQRankSum=-1.433;QD=35.89;ReadPosRankSum=1.065;VQSLOD=3.9192;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:75.23:0,75,1174	0/0:15,0:15:45.15:0,45,712	0/0:14,0:13:24.43:0,24,396	0/0:22,0:22:57.19:0,57,893	0/0:34,0:34:99:0,102,1630	0/0:22,0:22:66.23:0,66,1055	0/0:33,0:33:99:0,99,1532	0/0:26,0:26:78.24:0,78,1184	1/1:0,30:30:84.28:1172,84,0	0/0:40,0:40:99:0,117,1851	0/0:25,0:25:75.24:0,75,1175	0/0:33,0:33:99:0,99,1583	0/0:22,0:22:66.23:0,66,1054	0/0:43,0:42:99:0,117,1847	0/0:28,0:28:84.27:0,84,1320	0/0:24,0:24:69.24:0,69,1103	0/0:21,0:21:51.11:0,51,763	0/0:19,0:19:54.18:0,54,855	0/0:23,0:23:69.24:0,69,1101	0/0:34,0:34:99:0,99,1581	0/0:34,0:33:90.29:0,90,1409	0/0:25,0:25:75.26:0,75,1194	0/0:21,0:21:63.20:0,63,983	0/0:34,0:34:96.27:0,96,1463	0/0:35,0:35:99:0,102,1631	0/0:34,0:34:99:0,102,1607	0/0:21,0:21:63.19:0,63,958	0/0:16,0:16:46.71:0,47,712
chr10	9628041	.	GCACACACACAAA	G	957.35	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.136;DP=735;FS=2.743;HRun=0;HaplotypeScore=253.9991;InbreedingCoeff=0.9878;MQ=63.30;MQ0=17;MQRankSum=-4.502;QD=36.82;ReadPosRankSum=0.721;VQSLOD=3.0067;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:60.12:0,60,1873	0/0:9,0:9:24.05:0,24,684	0/0:33,0:11:19.92:0,20,187	0/0:42,0:17:22.03:0,22,307	0/0:20,0:20:44.84:0,45,1303	0/0:22,0:22:55.36:0,55,2052	0/0:37,0:37:93.24:0,93,2661	0/0:28,0:28:57.14:0,57,1251	1/1:19,7:26:56.71:1052,57,0	0/0:29,0:28:80:0,80,2548	0/0:18,0:18:42.36:0,42,1350	0/0:51,0:50:99:0,126,3684	0/0:23,0:23:56.21:0,56,1652	0/0:27,0:26:63.08:0,63,1389	0/0:31,0:31:82.11:0,82,2328	0/0:34,0:34:86.25:0,86,2707	0/0:32,0:31:52.54:0,53,1855	0/0:19,0:18:39.06:0,39,1237	0/0:20,0:20:54.04:0,54,1242	0/0:19,0:19:32.10:0,32,443	0/0:24,0:24:26.19:0,26,438	0/0:23,0:23:58.35:0,58,1653	0/0:19,0:18:42.05:0,42,1348	0/0:39,0:39:87.19:0,87,2807	0/0:24,0:23:51.10:0,51,1576	0/0:31,0:31:81.21:0,81,2690	0/0:18,0:17:42.14:0,42,1570	0/0:14,0:14:38.93:0,39,803
chr10	9628052	.	AAC	A	5789.68	PASS	AB=0.796;AC=33;AF=0.611;AN=54;BaseQRankSum=-1.965;DP=785;FS=9.084;HRun=0;HaplotypeScore=115.5071;InbreedingCoeff=0.4192;MQ=60.01;MQ0=24;MQRankSum=1.927;QD=10.72;ReadPosRankSum=3.672;VQSLOD=4.2716;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:19,1:30:6.91:7,0,223	1/1:3,6:9:18.01:189,18,0	./.	0/0:44,0:16:6:0,6,54	0/1:12,2:21:42.01:42,0,133	0/0:14,0:20:24.02:0,24,245	0/0:34,0:39:34.01:0,34,346	1/1:16,8:23:23.76:257,24,0	0/1:24,0:24:14.04:56,0,14	1/1:18,17:34:49.39:502,49,0	1/1:12,6:19:0.81:135,1,0	1/1:21,30:53:71.45:754,71,0	1/1:10,11:21:32.93:373,33,0	0/1:18,8:25:36.89:59,0,37	1/1:20,9:30:37.82:369,38,0	1/1:12,19:34:7.68:471,8,0	1/1:12,20:32:41.74:432,42,0	1/1:4,14:18:26.91:285,27,0	0/0:23,0:23:25.11:0,25,269	0/0:11,0:21:13.36:0,13,58	0/0:16,0:31:5.97:0,6,46	1/1:11,14:24:26.21:304,26,0	1/1:6,12:18:23.51:251,24,0	0/1:19,26:45:30.97:478,0,31	0/0:16,0:27:20.98:0,21,176	0/1:17,15:34:1.65:369,0,2	0/1:8,12:20:12.69:285,0,13	1/1:11,6:17:20.23:172,20,0
chr10	9628351	.	ATG	A	1281.88	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=8.982;DP=841;FS=1.420;HRun=0;HaplotypeScore=104.4700;InbreedingCoeff=0.9886;MQ=80.92;MQ0=0;MQRankSum=-0.781;QD=36.63;ReadPosRankSum=2.802;VQSLOD=5.6837;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,114,2168	0/0:21,0:21:63.22:0,63,1195	0/0:27,0:27:79.48:0,79,1357	0/0:18,0:18:48.63:0,49,806	0/0:25,0:25:75.26:0,75,1417	0/0:19,0:19:54.19:0,54,1034	0/0:28,0:28:84.26:0,84,1547	0/0:32,0:32:90.31:0,90,1733	1/1:1,34:35:90.31:1377,90,0	0/0:50,0:50:99:0,151,2890	0/0:25,0:25:75.24:0,75,1415	0/0:33,0:33:96.33:0,96,1844	0/0:30,0:30:87.30:0,87,1679	0/0:39,0:39:99:0,117,2223	0/0:34,0:34:99:0,99,1870	0/0:34,2:36:16.44:0,16,1801	0/0:42,0:42:99:0,123,2374	0/0:19,0:19:57.19:0,57,1081	0/0:24,0:24:69.23:0,69,1282	0/0:32,0:32:96.33:0,96,1836	0/0:36,0:36:99:0,108,2085	0/0:36,0:36:99:0,99,1880	0/0:29,0:29:87.28:0,87,1635	0/0:33,0:33:96.33:0,96,1840	0/0:26,0:26:75.22:0,75,1372	0/0:31,0:31:93.31:0,93,1757	0/0:28,0:28:84.29:0,84,1584	0/0:15,0:15:42.14:0,42,809
chr10	9629045	.	TAC	T	1505.16	PASS	AB=0.897;AC=33;AF=0.635;AN=52;BaseQRankSum=0.773;DP=564;FS=2.314;HRun=0;HaplotypeScore=84.7420;InbreedingCoeff=0.4586;MQ=65.53;MQ0=14;MQRankSum=0.736;QD=4.60;ReadPosRankSum=1.248;VQSLOD=2.6388;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:34:6.37:6,0,163	1/1:4,4:8:6.49:66,6,0	./.	./.	0/0:16,0:16:12.04:0,12,149	0/0:15,0:15:12.01:0,12,121	0/0:27,0:33:33.01:0,33,330	1/1:15,0:14:2.29:31,2,0	0/0:18,0:26:11.79:0,12,119	1/1:20,1:23:11.86:112,12,0	1/1:10,3:14:2.84:14,3,0	1/1:6,7:14:5.85:44,6,0	0/1:13,0:15:1.49:96,0,1	1/1:14,6:21:5.85:47,6,0	1/1:16,0:16:9.02:91,9,0	0/1:10,7:17:5.91:145,0,6	1/1:14,8:26:23.56:205,24,0	0/1:15,1:17:8.74:67,0,9	0/1:11,0:9:26.10:26,0,37	0/0:14,0:18:18.02:0,18,207	0/0:44,0:45:63.12:0,63,733	1/1:12,6:20:14.71:126,15,0	1/1:12,0:12:9.02:98,9,0	1/1:9,13:24:32.87:326,33,0	0/0:16,0:16:11.92:0,12,144	1/1:13,4:17:13.12:138,13,0	1/1:14,0:17:1.07:11,1,0	1/1:1,2:3:3.01:33,3,0
chr10	9629234	.	AAGACAGACAGAC	A	5980.21	PASS	AB=1.000;AC=30;AF=0.556;AN=54;BaseQRankSum=9.211;DP=623;FS=2.227;HRun=0;HaplotypeScore=261.9946;InbreedingCoeff=0.1327;MQ=58.66;MQ0=4;MQRankSum=-5.932;QD=12.89;ReadPosRankSum=-0.068;VQSLOD=3.5779;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:17,16:33:12.04:372,12,0	0/1:8,0:8:7.49:7,0,20	0/0:34,0:23:16.28:0,16,309	0/0:30,0:24:24.08:0,24,991	1/1:4,14:18:27.56:746,28,0	1/1:8,9:17:21.07:641,21,0	1/1:15,13:27:24.08:760,24,0	0/0:24,0:24:33.03:0,33,523	1/1:14,17:31:43.70:1241,44,0	0/1:21,0:21:95.86:107,0,96	0/0:20,0:20:0.38:0,0,299	0/1:21,0:21:19.16:19,0,29	0/1:22,0:22:3.69:4,0,195	0/0:27,0:27:2.37:0,2,243	0/1:18,0:18:7.57:8,0,114	0/1:20,0:20:14.62:15,0,159	0/1:29,0:28:10.91:11,0,69	0/0:21,0:21:7.83:0,8,130	1/1:11,5:14:15.05:521,15,0	1/1:6,11:17:33:719,33,0	1/1:18,12:29:3.01:95,3,0	0/1:24,0:24:15.09:15,0,68	0/1:20,0:20:0.72:1,0,157	0/1:33,0:33:1.88:2,0,123	1/1:9,8:17:21.07:674,21,0	0/1:21,0:21:16.03:16,0,137	0/1:20,0:20:7.06:7,0,143	./.
chr10	9629266	.	CAGA	C	4122.56	PASS	AB=0.801;AC=22;AF=0.393;AN=56;BaseQRankSum=13.576;DP=599;FS=3.389;HRun=0;HaplotypeScore=187.0661;InbreedingCoeff=-0.6651;MQ=49.59;MQ0=6;MQRankSum=-11.124;QD=8.55;ReadPosRankSum=9.613;VQSLOD=1.7248;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:31,0:31:2.08:2,0,185	0/1:8,7:15:99:160,0,194	0/0:24,0:16:45.14:0,45,627	0/0:25,0:20:60.19:0,60,891	0/0:21,0:21:5.12:0,5,259	0/1:13,0:13:24.57:25,0,170	0/1:21,0:20:13.51:14,0,285	0/1:26,0:26:46.34:46,0,778	0/1:26,1:27:45.56:46,0,351	0/1:16,8:24:99:231,0,340	0/1:13,16:29:99:352,0,330	0/1:10,12:22:99:314,0,152	0/1:14,10:24:99:404,0,224	0/1:20,10:30:99:326,0,363	0/1:13,10:23:99:260,0,287	0/1:6,11:17:99:250,0,112	0/1:14,8:21:99:315,0,129	0/0:19,3:22:2.61:0,3,582	0/1:15,0:14:29.62:30,0,281	0/1:13,0:13:2.33:2,0,208	0/0:23,0:22:4.74:0,5,111	0/1:7,13:20:99:316,0,125	0/1:12,7:19:99:227,0,217	0/1:18,10:30:99:143,0,235	0/1:15,0:15:21.21:21,0,250	0/1:9,12:21:99:315,0,159	0/1:15,10:25:99:325,0,283	0/0:1,0:1:3.01:0,3,39
chr10	9629271	.	AGACCG	A	5093.34	PASS	AB=0.735;AC=17;AF=0.304;AN=56;BaseQRankSum=15.412;DP=607;FS=4.593;HRun=0;HaplotypeScore=205.4674;InbreedingCoeff=-0.4562;MQ=51.64;MQ0=4;MQRankSum=-10.933;QD=13.44;ReadPosRankSum=9.151;VQSLOD=3.1417;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:35.97:0,36,635	0/1:7,7:14:84.85:223,0,85	0/0:24,0:18:54.15:0,54,1191	0/0:21,0:18:50.37:0,50,974	0/0:22,0:22:22.97:0,23,470	0/0:14,0:14:3.21:0,3,346	0/0:23,0:22:23.02:0,23,621	0/0:30,0:30:71.92:0,72,422	0/1:27,1:28:18.26:18,0,610	0/1:17,8:25:99:331,0,105	0/1:13,15:28:99:401,0,158	0/1:11,12:23:74.75:485,0,75	0/1:13,10:23:86.84:442,0,87	0/1:16,10:26:99:366,0,132	0/1:13,9:22:99:353,0,106	0/1:7,11:18:40.16:390,0,40	0/1:15,8:23:58.88:395,0,59	0/1:20,3:23:29.52:30,0,273	0/0:18,0:17:7.02:0,7,634	0/1:13,0:13:0.93:1,0,321	0/0:26,0:26:16.41:0,16,299	0/1:9,13:22:73.80:486,0,74	0/1:9,7:16:91.33:215,0,91	0/1:23,10:33:99:171,0,130	0/0:15,0:15:6.83:0,7,437	0/1:8,11:19:39.31:450,0,39	0/1:13,10:23:99:336,0,137	0/0:1,0:1:2.96:0,3,19
chr10	9631677	.	AG	A	919.11	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.484;DP=678;FS=3.103;HRun=7;HaplotypeScore=73.6560;InbreedingCoeff=0.9872;MQ=62.89;MQ0=2;MQRankSum=-1.098;QD=20.42;ReadPosRankSum=0.579;VQSLOD=3.2560;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,138,1720	0/0:6,0:6:15.01:0,15,169	0/0:22,0:15:30.04:0,30,367	0/0:28,0:20:42.69:0,43,441	0/0:34,0:34:99:0,99,1241	1/1:3,26:29:72.16:735,72,0	1/1:0,16:16:30.07:306,30,0	0/0:29,0:29:63.65:0,64,753	0/0:25,0:25:66.21:0,66,827	0/0:32,0:32:78.24:0,78,966	0/0:20,0:20:54.17:0,54,679	0/0:19,0:19:57.17:0,57,701	0/0:24,0:24:69.20:0,69,852	0/0:27,0:27:69.21:0,69,857	0/0:19,0:19:42.13:0,42,527	0/0:21,0:21:60.18:0,60,744	0/0:30,0:31:80.02:0,80,1001	0/0:21,0:21:56.85:0,57,689	0/0:20,0:20:57.18:0,57,712	0/0:22,0:22:51.13:0,51,613	0/0:28,0:28:72.23:0,72,906	0/0:28,0:28:81.26:0,81,1013	0/0:25,0:25:72.22:0,72,893	0/0:22,0:22:66.04:0,66,803	0/0:23,0:23:66.21:0,66,830	0/0:19,0:19:51.15:0,51,618	0/0:31,0:30:87.25:0,87,1068	0/0:6,0:6:18.06:0,18,225
chr10	9631690	.	GA	G	696.78	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=8.259;DP=694;FS=0.000;HRun=4;HaplotypeScore=79.6876;InbreedingCoeff=0.7884;MQ=63.68;MQ0=2;MQRankSum=-0.254;QD=27.87;ReadPosRankSum=-1.357;VQSLOD=2.4820;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,150,2079	0/0:6,0:6:18.05:0,18,231	0/0:26,0:17:13.72:0,14,496	0/0:32,1:24:0.94:0,1,498	0/0:35,0:35:99:0,105,1422	0/0:28,0:28:78.25:0,78,1073	0/0:18,0:18:36.11:0,36,486	0/0:25,0:25:62.53:0,63,852	1/1:0,25:25:66.20:791,66,0	0/0:26,0:26:78.25:0,78,1061	0/0:19,0:19:57.16:0,57,760	0/0:22,0:22:63.05:0,63,799	0/0:20,0:20:57.15:0,57,768	0/0:25,0:25:69.22:0,69,948	0/0:19,0:19:54.17:0,54,737	0/0:23,0:23:69.23:0,69,964	0/0:27,0:27:78.26:0,78,1085	0/0:23,0:23:69.16:0,69,906	0/0:20,0:20:57.18:0,57,779	0/0:25,0:25:72.21:0,72,955	0/0:28,0:28:78.26:0,78,1090	0/0:32,0:32:84.24:0,84,1122	0/0:30,0:30:87.28:0,87,1195	0/0:25,0:24:75.24:0,75,1030	0/0:24,0:24:63.21:0,63,877	0/0:21,0:21:63.12:0,63,851	0/0:30,0:29:84.28:0,84,1172	0/0:8,0:8:24.03:0,24,283
chr10	9632903	.	GA	G	4341.09	PASS	AB=0.850;AC=19;AF=0.339;AN=56;BaseQRankSum=11.205;DP=580;FS=0.708;HRun=10;HaplotypeScore=57.9697;InbreedingCoeff=0.9186;MQ=75.58;MQ0=1;MQRankSum=-0.957;QD=19.82;ReadPosRankSum=1.737;VQSLOD=5.7589;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,34:38:70.28:781,70,0	0/0:10,0:10:30.08:0,30,332	0/1:14,3:15:25.60:26,0,164	0/0:11,0:11:18.03:0,18,189	1/1:2,27:29:74.97:651,75,0	1/1:2,16:18:41.99:365,42,0	1/1:1,20:21:41.98:365,42,0	0/0:26,0:26:66.16:0,66,716	1/1:2,17:19:50.98:443,51,0	0/0:24,0:24:42.11:0,42,465	0/0:10,0:10:27.06:0,27,291	0/0:20,0:20:51.14:0,51,564	0/0:22,0:22:63.16:0,63,690	0/0:18,0:19:50.97:0,51,545	0/0:25,0:25:57.12:0,57,618	0/0:21,0:21:60.15:0,60,657	0/0:32,2:34:44.06:0,44,892	0/0:27,0:27:69.18:0,69,759	1/1:3,20:23:59.95:513,60,0	1/1:2,20:22:56.96:495,57,0	1/1:0,9:9:24:208,24,0	0/0:22,0:24:68.97:0,69,722	0/0:20,0:20:51.14:0,51,564	0/0:11,0:11:30.08:0,30,332	1/1:3,20:23:56.97:495,57,0	0/0:20,0:20:45.11:0,45,484	0/0:27,0:27:78.16:0,78,830	0/0:8,0:10:29.73:0,30,285
chr10	9634292	.	CA	C	6252.13	PASS	AB=0.778;AC=53;AF=0.946;AN=56;BaseQRankSum=-3.305;DP=510;FS=14.752;HRun=11;HaplotypeScore=69.6392;InbreedingCoeff=-0.0781;MQ=74.60;MQ0=3;MQRankSum=-0.114;QD=12.26;ReadPosRankSum=4.416;VQSLOD=2.8992;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,33:39:79:640,79,0	1/1:3,6:9:11.97:97,12,0	0/1:21,3:17:49.81:50,0,157	0/1:28,3:18:52.36:52,0,64	1/1:3,10:14:28.99:228,29,0	1/1:4,12:16:4.02:239,4,0	1/1:6,17:24:8.12:251,8,0	1/1:7,16:23:21.92:383,22,0	1/1:1,0:23:40.74:118,41,0	1/1:7,24:31:71.90:591,72,0	1/1:2,8:11:4.80:179,5,0	1/1:7,7:15:13.99:104,14,0	1/1:0,18:18:44.95:369,45,0	1/1:4,9:13:23.97:197,24,0	1/1:7,18:25:22.53:343,23,0	0/1:1,8:9:7.28:105,0,7	1/1:1,13:14:32.96:271,33,0	1/1:1,12:14:32:252,32,0	1/1:3,0:12:18.33:53,18,0	1/1:3,0:12:14.25:41,14,0	1/1:2,0:14:22.41:65,22,0	1/1:1,6:8:20.02:154,20,0	1/1:7,15:22:32.80:271,33,0	1/1:5,15:21:6.26:217,6,0	1/1:6,14:20:6.80:263,7,0	1/1:4,9:14:29:228,29,0	1/1:2,16:18:32.96:271,33,0	1/1:0,14:14:26.97:222,27,0
chr10	9634313	.	CAG	C	54.64	PASS	AB=1.000;AC=9;AF=0.225;AN=40;BaseQRankSum=1.404;DP=475;FS=9.328;HRun=0;HaplotypeScore=94.1801;InbreedingCoeff=0.5381;MQ=61.12;MQ0=10;MQRankSum=-0.087;QD=0.46;ReadPosRankSum=0.807;VQSLOD=0.9970;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:28,4:31:11.52:104,12,0	./.	./.	0/1:34,0:10:0.21:0,0,0	1/1:14,0:15:5.82:36,6,0	./.	./.	0/0:25,0:25:5.91:0,6,39	1/1:18,0:19:2.84:14,3,0	0/0:28,0:28:17.64:0,18,138	./.	0/0:12,0:12:2.80:0,3,13	0/0:21,0:21:11.97:0,12,105	./.	0/0:25,0:25:17.66:0,18,149	0/0:9,0:9:6.44:0,6,60	0/0:16,0:16:3.45:0,3,23	0/0:18,0:18:0.47:0,0,1	0/0:10,0:9:9.03:0,9,112	./.	0/0:11,0:11:9.02:0,9,101	./.	0/0:17,0:17:8.66:0,9,58	0/0:18,0:18:12.02:0,12,131	1/1:18,0:19:2.84:14,3,0	0/0:11,0:10:6.02:0,6,67	0/0:17,0:17:9.91:0,10,74	0/0:16,0:15:4.40:0,4,15
chr10	9635740	.	G	GAGAGAC	1968.29	PASS	AB=0.926;AC=18;AF=0.321;AN=56;BaseQRankSum=1.920;DP=718;FS=6.172;HRun=0;HaplotypeScore=154.8939;InbreedingCoeff=0.6709;MQ=71.18;MQ0=9;MQRankSum=1.615;QD=6.35;ReadPosRankSum=-0.578;VQSLOD=2.0620;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:41,0:42:6:120,6,0	0/0:13,0:13:32.96:0,33,274	0/0:29,0:21:9.02:0,9,94	0/0:33,0:26:17.74:0,18,146	0/1:14,10:23:34.94:36,0,35	1/1:25,0:24:44.87:392,45,0	1/1:38,0:36:29.72:326,30,0	0/0:31,0:29:32.85:0,33,277	1/1:21,0:21:34.46:300,34,0	0/0:23,0:22:38.87:0,39,427	0/0:15,0:15:29.72:0,30,273	0/0:25,0:25:38.94:0,39,469	0/0:27,0:26:47.81:0,48,421	0/0:17,0:17:23.97:0,24,198	0/0:32,0:30:47.98:0,48,473	0/1:28,0:28:27.10:27,0,216	0/1:22,0:22:3.68:4,0,119	0/0:27,0:27:65.97:0,66,865	1/1:18,0:18:23.88:199,24,0	1/1:31,0:31:53.88:476,54,0	0/1:35,0:35:10.16:41,0,10	0/0:25,0:25:44.90:0,45,401	0/0:20,0:19:26.93:0,27,252	0/0:33,0:33:65.76:0,66,666	1/1:26,0:25:17.98:245,18,0	0/0:25,0:25:44.94:0,45,400	0/0:24,0:24:24.99:0,25,274	0/0:9,0:9:17.94:0,18,166
chr10	9635758	.	C	CAGAGACAG	1908.85	PASS	AB=0.845;AC=15;AF=0.268;AN=56;BaseQRankSum=2.562;DP=637;FS=4.062;HRun=0;HaplotypeScore=151.1756;InbreedingCoeff=0.3341;MQ=55.78;MQ0=12;MQRankSum=0.456;QD=6.58;ReadPosRankSum=-2.731;VQSLOD=1.9678;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:11,25:43:16.14:80,0,16	0/0:14,0:14:32.96:0,33,274	0/0:14,0:6:9.02:0,9,94	0/0:18,0:11:17.74:0,18,146	0/1:22,0:20:40.21:40,0,72	0/1:24,0:23:15.19:340,0,15	0/1:33,0:30:5.28:269,0,5	0/0:23,0:21:34.97:0,35,282	1/1:23,0:23:2.06:233,2,0	0/0:19,0:20:32.87:0,33,429	0/0:15,0:15:29.99:0,30,301	0/0:21,0:22:29.12:0,29,577	0/0:19,0:18:48.33:0,48,441	0/0:18,0:18:25.80:0,26,260	0/0:24,0:23:13.20:0,13,476	0/1:15,0:26:70.75:71,0,216	0/1:9,0:21:36.50:37,0,103	0/0:26,0:28:71.02:0,71,1069	1/1:15,0:16:29.59:205,30,0	1/1:26,0:29:53.78:476,54,0	0/1:28,0:29:42.78:56,0,43	0/0:26,0:26:12.20:0,12,392	0/0:20,0:19:26.42:0,26,302	0/0:32,0:33:70.58:0,71,747	1/1:24,0:23:28.15:277,28,0	0/0:21,0:21:50.44:0,50,458	0/0:19,0:23:42.68:0,43,350	0/0:7,0:7:17.93:0,18,175
chr10	9635768	.	G	GAC	572.82	PASS	AB=0.867;AC=5;AF=0.089;AN=56;BaseQRankSum=6.320;DP=599;FS=6.162;HRun=0;HaplotypeScore=98.4112;InbreedingCoeff=0.2759;MQ=53.16;MQ0=13;MQRankSum=-0.516;QD=6.29;ReadPosRankSum=-1.437;VQSLOD=1.9227;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:17.16:0,17,141	0/0:14,0:14:32.89:0,33,265	0/0:6,0:5:7.69:0,8,103	0/0:12,0:3:8.99:0,9,91	0/0:18,0:16:6.78:0,7,160	0/0:26,0:25:51.04:0,51,502	0/0:36,0:33:61.17:0,61,528	0/0:20,0:18:53.62:0,54,402	0/1:23,0:23:82.12:200,0,82	0/0:19,0:17:42.33:0,42,380	0/0:15,0:15:29.98:0,30,278	0/0:23,0:23:56.18:0,56,586	0/0:19,0:18:53.73:0,54,432	0/0:20,0:20:32.21:0,32,310	0/0:23,0:22:37.76:0,38,416	0/0:21,0:21:12.27:0,12,205	0/0:21,0:21:6.10:0,6,101	0/0:25,0:25:71.93:0,72,763	0/1:14,0:14:76.19:78,0,76	1/1:24,0:24:35.55:372,36,0	0/1:10,20:30:45.32:45,0,65	0/0:26,0:26:59.18:0,59,521	0/0:21,0:20:29.79:0,30,282	0/0:36,0:36:74.51:0,75,688	0/0:25,0:24:26.26:0,26,217	0/0:19,0:19:56.92:0,57,528	0/0:21,0:21:45.38:0,45,405	0/0:8,0:7:20.94:0,21,185
chr10	9636042	.	TGCTCC	T	3037.61	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=13.438;DP=649;FS=7.768;HRun=0;HaplotypeScore=135.7091;InbreedingCoeff=0.9984;MQ=79.02;MQ0=0;MQRankSum=-13.268;QD=33.02;ReadPosRankSum=-0.353;VQSLOD=2.7410;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,32:33:63.21:948,63,0	0/0:16,0:16:48.16:0,48,1535	0/0:23,0:24:60.62:0,61,1742	0/0:13,0:13:36.06:0,36,883	1/1:2,9:11:21.06:291,21,0	1/1:0,17:17:39.13:599,39,0	1/1:0,15:15:45.15:685,45,0	0/0:27,0:27:81.27:0,81,2592	0/0:30,0:30:90.31:0,90,2998	0/0:20,0:20:60.21:0,60,1969	0/0:11,0:11:33.11:0,33,1098	0/0:30,0:30:90.31:0,90,2918	0/0:25,0:25:75.26:0,75,2398	0/0:30,0:30:84.29:0,84,2685	0/0:28,0:28:84.29:0,84,2768	0/0:35,0:35:99:0,102,3361	0/0:34,0:34:99:0,102,3269	0/0:21,0:21:63.22:0,63,2093	0/0:25,0:25:75.24:0,75,2336	0/0:31,0:31:93.32:0,93,2988	0/0:33,0:33:99:0,99,3233	0/0:24,0:24:69.24:0,69,2254	0/0:13,0:13:39.13:0,39,1269	0/0:30,0:30:90.29:0,90,2889	1/1:0,16:16:45.15:690,45,0	0/0:17,0:17:48.16:0,48,1555	0/0:32,0:32:96.33:0,96,3109	0/0:8,0:8:24.08:0,24,716
chr10	9636048	.	A	AT	1750.18	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=13.463;DP=681;FS=9.339;HRun=0;HaplotypeScore=95.7643;InbreedingCoeff=0.9976;MQ=78.60;MQ0=0;MQRankSum=-13.433;QD=15.22;ReadPosRankSum=-1.405;VQSLOD=4.6685;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,35:38:65.74:512,66,0	0/0:14,0:14:42.14:0,42,587	0/0:25,0:25:60.17:0,60,839	0/0:14,0:14:30.09:0,30,393	1/1:5,9:14:19.72:140,20,0	1/1:4,17:21:44.91:384,45,0	1/1:4,15:19:50.88:435,51,0	0/0:28,0:28:81.25:0,81,1103	0/0:32,0:32:96.30:0,96,1324	0/0:23,0:23:69.22:0,69,937	0/0:13,0:13:33.11:0,33,458	0/0:30,0:30:90.30:0,90,1254	0/0:27,0:27:72.24:0,72,1007	0/0:29,0:29:81.26:0,81,1116	0/0:29,0:29:87.28:0,87,1199	0/0:34,0:34:99:0,102,1427	0/0:33,0:33:99:0,99,1367	0/0:22,0:22:66.22:0,66,922	0/0:22,0:22:66.22:0,66,913	0/0:32,0:32:96.32:0,96,1342	0/0:33,0:33:90.29:0,90,1241	0/0:23,0:23:69.20:0,69,944	0/0:14,0:14:39.08:0,39,508	0/0:31,0:31:93.31:0,93,1300	1/1:7,16:23:50.91:455,51,0	0/0:19,0:19:54.18:0,54,755	0/0:32,0:32:96.32:0,96,1343	0/0:7,0:7:21.07:0,21,294
chr10	9637250	.	ACT	A	884.97	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.934;DP=672;FS=0.762;HRun=0;HaplotypeScore=76.2540;InbreedingCoeff=0.9943;MQ=87.91;MQ0=0;MQRankSum=-2.508;QD=32.78;ReadPosRankSum=0.807;VQSLOD=5.3352;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:60.18:0,60,1060	0/0:11,0:11:30.09:0,30,520	0/0:30,0:30:72.83:0,73,1420	0/0:19,0:19:48.16:0,48,843	0/0:33,0:33:93.31:0,93,1662	0/0:40,0:40:99:0,117,2129	0/0:16,0:16:48.16:0,48,880	0/0:26,0:26:69.71:0,70,1264	1/1:3,24:27:20.24:977,20,0	0/0:25,0:25:69.24:0,69,1263	0/0:16,0:16:39.12:0,39,686	0/0:20,0:20:57.18:0,57,1015	0/0:21,0:21:63.22:0,63,1142	0/0:36,0:36:99:0,105,1882	0/0:32,0:31:96.33:0,96,1760	0/0:34,0:34:96.33:0,96,1756	0/0:12,0:12:36.12:0,36,660	0/0:22,0:22:60.21:0,60,1100	0/0:28,0:28:75.22:0,75,1286	0/0:27,0:27:78.25:0,78,1380	0/0:21,0:21:63.22:0,63,1147	0/0:17,0:17:51.17:0,51,917	0/0:16,0:16:48.16:0,48,880	0/0:19,0:19:54.19:0,54,982	0/0:34,0:34:90.31:0,90,1633	0/0:29,0:29:84.29:0,84,1535	0/0:25,0:24:75.26:0,75,1342	0/0:14,0:14:36.12:0,36,660
chr10	9637638	.	T	TC	32205.49	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-8.204;DP=775;FS=17.996;HRun=0;HaplotypeScore=71.2691;InbreedingCoeff=0.9984;MQ=85.37;MQ0=0;MQRankSum=-10.884;QD=44.24;ReadPosRankSum=6.528;VQSLOD=2.7434;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,46:46:99:1965,123,0	1/1:0,11:11:27.09:432,27,0	0/0:20,0:20:54.17:0,54,725	0/0:27,0:27:72.18:0,72,937	1/1:0,22:22:63.21:1007,63,0	1/1:1,18:19:54.18:863,54,0	1/1:0,31:31:78.27:1247,78,0	1/1:0,35:34:99:1629,105,0	1/1:0,28:28:81.28:1294,81,0	1/1:2,30:33:96.32:1512,96,0	1/1:2,16:18:45.15:716,45,0	1/1:1,29:30:84.29:1343,84,0	1/1:1,30:31:81.28:1295,81,0	1/1:0,27:27:78.27:1247,78,0	1/1:1,40:41:99:1775,111,0	1/1:0,38:38:99:1727,108,0	1/1:0,46:46:99:1967,123,0	1/1:0,30:30:87.30:1390,87,0	1/1:1,13:14:42.14:669,42,0	1/1:3,29:32:87.30:1391,87,0	1/1:1,43:44:99:1902,120,0	1/1:0,32:32:96.33:1535,96,0	1/1:0,19:19:51.17:815,51,0	1/1:0,22:22:60.20:959,60,0	1/1:0,17:17:48.16:767,48,0	1/1:0,24:24:72.23:1128,72,0	1/1:1,28:29:77.86:1246,78,0	1/1:0,9:9:24.08:384,24,0
chr10	9638596	.	A	AAT	14333.37	PASS	AC=40;AF=0.909;AN=44;BaseQRankSum=-5.347;DP=457;FS=4.223;HRun=0;HaplotypeScore=56.4930;InbreedingCoeff=0.7415;MQ=76.10;MQ0=2;MQRankSum=-3.037;QD=34.96;ReadPosRankSum=3.367;VQSLOD=7.1891;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,0:5:3:25,3,0	1/1:1,12:13:30.10:492,30,0	0/0:13,0:13:6.44:0,6,148	0/0:13,0:13:17.67:0,18,150	1/1:10,0:10:5.99:50,6,0	./.	./.	1/1:9,20:29:63.20:1018,63,0	./.	1/1:5,28:33:87.30:1440,87,0	1/1:3,26:30:69.24:1147,69,0	1/1:3,15:18:39.13:648,39,0	1/1:4,12:16:36.12:597,36,0	1/1:1,17:19:48.16:798,48,0	1/1:3,10:15:27.09:449,27,0	1/1:4,21:25:63.22:1047,63,0	1/1:1,21:22:45.15:748,45,0	1/1:4,29:33:43.41:1259,43,0	1/1:5,0:5:3.01:31,3,0	./.	./.	1/1:7,20:26:45.15:745,45,0	1/1:8,9:17:21.07:336,21,0	1/1:7,13:20:36.12:598,36,0	./.	1/1:4,31:37:99:1571,99,0	1/1:3,18:19:51.17:844,51,0	1/1:4,10:14:30.10:491,30,0
chr10	9639544	.	CTTCCT	C	3990.61	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=7.709;DP=544;FS=42.033;HRun=0;HaplotypeScore=118.6573;InbreedingCoeff=0.9995;MQ=89.80;MQ0=0;MQRankSum=-8.041;QD=49.27;ReadPosRankSum=-0.252;VQSLOD=1.8192;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,17:19:39.13:847,39,0	0/0:12,0:12:36.11:0,36,1071	0/0:19,0:19:48.16:0,48,1315	0/0:35,0:36:97.47:0,97,2461	1/1:1,17:18:45.11:931,45,0	1/1:1,13:14:30.10:651,30,0	1/1:1,11:12:27.09:586,27,0	0/0:27,0:27:66.23:0,66,2055	0/0:18,0:18:54.19:0,54,1694	0/0:27,0:27:78.27:0,78,2476	0/0:13,0:13:36.12:0,36,1097	0/0:14,0:14:42.14:0,42,1333	0/0:19,0:19:57.20:0,57,1773	0/0:12,0:12:36.12:0,36,1127	0/0:24,0:24:72.25:0,72,2238	0/0:18,0:18:39.13:0,39,1237	0/0:31,0:31:87.30:0,87,2607	0/0:15,0:15:42.13:0,42,1262	0/0:16,0:16:45.15:0,45,1381	0/0:15,0:15:45.15:0,45,1427	0/0:28,0:28:75.24:0,75,2307	0/0:24,0:24:69.24:0,69,2145	0/0:17,0:17:51.18:0,51,1617	0/0:27,0:27:78.74:0,79,2262	1/1:1,17:18:45.15:976,45,0	0/0:18,0:18:54.19:0,54,1705	0/0:19,0:19:51.18:0,51,1585	0/0:14,0:14:42.14:0,42,1329
chr10	9639611	.	TAC	T	140.42	PASS	AB=0.989;AC=20;AF=0.357;AN=56;BaseQRankSum=2.139;DP=600;FS=6.183;HRun=0;HaplotypeScore=155.3713;InbreedingCoeff=-0.0789;MQ=46.65;MQ0=22;MQRankSum=1.850;QD=0.35;ReadPosRankSum=-0.799;VQSLOD=2.3772;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:16,6:22:0:0,0,0	0/0:3,0:3:2.92:0,3,21	0/0:10,0:6:2.68:0,3,11	0/0:19,0:11:17.90:0,18,183	0/0:22,0:21:0.46:0,0,1	0/0:19,3:19:12.87:0,13,66	0/1:27,4:27:17.84:24,0,18	0/0:28,0:19:3.60:0,4,28	1/1:20,0:17:0.34:1,0,0	0/1:31,0:29:35.18:35,0,61	0/1:13,0:13:5.05:17,0,5	0/1:21,0:21:9.37:9,0,36	1/1:18,0:18:6.96:24,7,0	0/1:15,0:14:8.70:16,0,9	0/1:27,0:26:0.25:7,0,0	0/1:20,1:19:13.30:47,0,13	0/1:33,0:33:11.44:18,0,11	0/1:13,0:13:1.24:1,0,29	0/1:18,0:15:0.05:0,0,18	0/1:18,0:18:0.66:1,0,19	0/1:41,0:38:5.06:5,0,20	0/1:23,0:22:6.06:6,0,7	0/0:14,0:14:6.91:0,7,50	0/1:41,0:40:23.88:24,0,39	0/0:27,6:33:0.43:0,0,2	0/0:13,0:12:3.82:0,4,51	1/1:19,0:17:3.01:35,3,0	0/0:10,0:9:2.83:0,3,7
chr10	9639620	.	ACG	A	6305.28	PASS	AB=1.000;AC=49;AF=0.875;AN=56;BaseQRankSum=-2.917;DP=583;FS=1.269;HRun=0;HaplotypeScore=139.1203;InbreedingCoeff=0.4847;MQ=44.44;MQ0=22;MQRankSum=3.068;QD=11.51;ReadPosRankSum=0.714;VQSLOD=4.8912;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:22:0.03:0,0,0	1/1:6,0:6:14.56:120,15,0	1/1:6,0:1:0.47:1,0,0	0/0:14,0:5:3.73:0,4,39	1/1:26,0:25:8.98:72,9,0	0/0:21,0:18:8.44:0,8,52	0/1:34,0:30:11.78:63,0,12	1/1:28,0:20:53.59:400,54,0	1/1:19,0:16:23.87:184,24,0	1/1:27,0:26:59.31:497,59,0	1/1:17,0:17:32.67:282,33,0	1/1:21,0:21:33.79:271,34,0	1/1:18,2:20:44.35:358,44,0	1/1:14,2:15:28.24:243,28,0	1/1:24,1:24:43.16:357,43,0	1/1:4,17:19:11.70:133,12,0	1/1:28,2:30:66.40:479,66,0	1/1:11,1:12:24.19:183,24,0	1/1:11,0:9:24.83:207,25,0	1/1:17,0:17:29.76:254,30,0	1/1:38,0:35:62.52:519,63,0	1/1:19,2:20:38.84:326,39,0	1/1:12,0:12:21.35:174,21,0	1/1:39,2:40:72.46:613,72,0	0/1:34,0:34:10.22:58,0,10	1/1:15,0:14:38.78:312,39,0	1/1:1,17:17:2.99:41,3,0	1/1:11,0:10:20.86:160,21,0
chr10	9639628	.	A	ACACG	438.52	PASS	AB=0.897;AC=8;AF=0.143;AN=56;BaseQRankSum=0.462;DP=599;FS=0.878;HRun=0;HaplotypeScore=178.8209;InbreedingCoeff=0.5198;MQ=44.16;MQ0=24;MQRankSum=-0.060;QD=2.90;ReadPosRankSum=-2.287;VQSLOD=1.9784;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:25,1:27:5.69:36,6,0	0/0:5,0:5:11.94:0,12,93	0/0:12,0:1:0:0,0,0	0/0:15,0:3:6.01:0,6,68	1/1:29,2:30:0.94:196,1,0	0/1:17,5:20:25.90:72,0,26	0/1:36,0:32:65.64:106,0,66	0/0:22,0:14:37.72:0,38,259	0/0:18,0:15:14.83:0,15,102	0/0:25,0:24:48.07:0,48,405	0/0:19,0:18:27.46:0,27,261	0/0:18,0:18:23.88:0,24,190	0/0:19,0:19:24.86:0,25,207	0/0:14,0:14:20.61:0,21,165	0/0:28,0:27:35.02:0,35,310	0/0:19,0:17:9.54:0,10,84	0/0:30,0:30:45.86:0,46,314	0/0:12,0:12:19.70:0,20,185	0/0:9,0:7:14.72:0,15,113	0/0:18,0:18:32.96:0,33,276	0/0:40,0:37:51.77:0,52,404	0/0:21,0:20:23.34:0,23,193	0/0:14,0:14:23.93:0,24,193	0/0:42,0:41:69.89:0,70,567	1/1:33,1:34:14.41:162,14,0	0/0:15,0:14:34.35:0,34,264	0/0:21,0:19:11.89:0,12,114	0/0:11,0:10:14.35:0,14,105
chr10	9639640	.	ACACG	A	6086.37	PASS	AB=1.000;AC=46;AF=0.821;AN=56;BaseQRankSum=-8.491;DP=620;FS=2.034;HRun=0;HaplotypeScore=152.8195;InbreedingCoeff=0.6349;MQ=47.12;MQ0=25;MQRankSum=-0.247;QD=12.40;ReadPosRankSum=0.922;VQSLOD=4.6457;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:24:14.78:0,15,112	1/1:5,0:5:13.78:101,14,0	1/1:25,0:4:5.45:31,5,0	0/1:22,0:9:29.35:52,0,29	0/0:35,0:34:31.26:0,31,231	0/1:21,0:19:1.48:1,0,102	0/0:34,0:31:2.54:0,3,97	1/1:25,0:17:46.34:373,46,0	1/1:16,0:13:2.26:59,2,0	1/1:23,0:22:15.49:358,15,0	1/1:20,0:19:25.74:202,26,0	1/1:21,0:21:28.59:335,29,0	1/1:23,0:23:45.68:363,46,0	1/1:14,0:14:26.96:253,27,0	1/1:30,1:30:47.52:506,48,0	1/1:20,1:19:13.34:115,13,0	1/1:26,1:27:61.17:539,61,0	1/1:14,0:14:27.90:258,28,0	1/1:8,0:8:21.81:174,22,0	1/1:21,0:21:36.12:306,36,0	1/1:36,0:33:63.31:522,63,0	1/1:19,1:19:32.89:310,33,0	1/1:13,0:13:4.11:150,4,0	1/1:41,1:41:71.39:651,71,0	0/0:36,0:36:26.10:0,26,241	1/1:17,0:16:39.62:305,40,0	1/1:18,0:17:5.65:49,6,0	1/1:7,0:6:8.98:74,9,0
chr10	9639642	.	ACG	A	6536.61	PASS	AB=1.000;AC=45;AF=0.804;AN=56;BaseQRankSum=-7.215;DP=623;FS=5.125;HRun=0;HaplotypeScore=139.4490;InbreedingCoeff=0.6637;MQ=47.81;MQ0=23;MQRankSum=0.557;QD=13.18;ReadPosRankSum=1.777;VQSLOD=4.6764;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:12.54:0,13,82	1/1:5,0:5:11.54:92,12,0	0/1:26,0:5:5.93:24,0,6	0/1:23,0:10:26.39:68,0,26	0/0:35,0:34:32.84:0,33,285	0/1:21,0:18:4.10:4,0,45	0/0:35,0:32:8.32:0,8,125	1/1:25,0:18:52.67:430,53,0	1/1:16,0:13:14.74:117,15,0	1/1:17,7:23:58.72:467,59,0	1/1:20,0:19:38.63:330,39,0	1/1:21,0:21:33.73:267,34,0	1/1:20,2:22:48.34:363,48,0	1/1:13,2:15:29.98:263,30,0	1/1:33,0:32:61.68:505,62,0	1/1:21,0:19:24.25:237,24,0	1/1:26,1:27:61.28:450,61,0	1/1:14,1:15:32.24:255,32,0	1/1:8,0:8:21.82:176,22,0	1/1:21,0:21:38.71:320,39,0	1/1:37,0:35:71.83:595,72,0	1/1:19,1:19:32.86:279,33,0	1/1:13,0:13:24.33:196,24,0	1/1:40,1:40:71.12:603,71,0	0/0:35,0:35:26.78:0,27,215	1/1:17,0:16:41.79:333,42,0	1/1:18,0:17:9.89:92,10,0	1/1:7,0:6:8.97:70,9,0
chr10	9639954	.	G	GA	2916.48	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-9.314;DP=591;FS=1.862;HRun=9;HaplotypeScore=58.2405;InbreedingCoeff=0.9852;MQ=74.57;MQ0=0;MQRankSum=-0.098;QD=25.58;ReadPosRankSum=2.249;VQSLOD=4.4433;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,28:33:83.93:892,84,0	0/0:10,0:10:26.99:0,27,234	0/0:19,0:19:29.65:0,30,245	0/0:15,0:15:9.18:0,9,139	1/1:6,23:30:63:675,63,0	1/1:2,17:19:51.14:564,51,0	1/1:1,14:15:39.11:431,39,0	0/0:33,0:33:85.26:0,85,743	0/0:15,0:16:47:0,47,389	0/0:29,0:29:65.97:0,66,573	0/0:12,0:12:29.98:0,30,260	0/0:21,1:23:28.82:0,29,463	0/0:21,0:21:53.98:0,54,469	0/0:23,0:23:56.96:0,57,492	0/0:20,0:20:50.97:0,51,443	0/0:18,0:19:50.02:0,50,423	0/0:39,0:39:99:0,114,986	0/0:27,0:27:79.99:0,80,677	0/0:24,0:24:62.92:0,63,536	0/0:13,0:13:29.99:0,30,260	0/0:16,0:16:41.98:0,42,365	0/0:20,0:20:47.83:0,48,399	0/0:16,0:16:38.98:0,39,338	0/0:38,0:38:99:0,102,885	1/1:0,17:17:48.13:529,48,0	0/0:18,0:18:44.97:0,45,388	0/0:16,0:16:38.95:0,39,330	0/0:9,0:9:20.99:0,21,182
chr10	9642678	.	A	AT	163.57	PASS	AB=0.853;AC=9;AF=0.161;AN=56;BaseQRankSum=1.570;DP=382;FS=44.638;HRun=0;HaplotypeScore=221.0568;InbreedingCoeff=-0.1604;MQ=38.26;MQ0=7;MQRankSum=-1.756;QD=1.18;ReadPosRankSum=-1.024;VQSLOD=1.4157;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:8.93:0,9,111	0/0:5,0:5:9.96:0,10,66	0/1:17,0:3:1.51:2,0,44	0/0:21,1:3:1.72:0,2,4	0/0:6,0:6:3.88:0,4,26	0/0:7,0:7:15.07:0,15,166	0/1:20,3:22:68.21:68,0,254	0/0:17,0:14:25.11:0,25,243	0/1:8,1:10:16.46:45,0,16	0/0:21,1:20:39.79:0,40,445	0/0:14,0:13:10.12:0,10,60	0/0:11,0:10:24.14:0,24,156	0/0:23,0:23:41.41:0,41,342	0/1:14,0:16:3.42:3,0,116	0/1:15,2:17:0.81:1,0,209	0/0:19,0:20:39.77:0,40,306	0/0:6,1:8:9.17:0,9,69	0/0:5,2:6:12.25:0,12,71	0/1:8,3:11:99:111,0,132	0/0:6,0:6:5.66:0,6,76	0/1:8,4:11:38.25:38,0,38	0/0:15,2:16:2.14:0,2,106	0/1:17,2:19:6.13:6,0,147	0/1:9,5:14:3.21:3,0,35	0/0:7,0:7:8.99:0,9,89	0/0:24,1:26:40.99:0,41,501	0/0:14,0:14:30.39:0,30,239	0/0:1,0:1:3.01:0,3,38
chr10	9642702	.	GA	G	2451.91	PASS	AB=0.935;AC=36;AF=0.643;AN=56;BaseQRankSum=7.802;DP=494;FS=2.592;HRun=3;HaplotypeScore=234.5480;InbreedingCoeff=0.5572;MQ=49.62;MQ0=14;MQRankSum=-6.277;QD=7.17;ReadPosRankSum=2.981;VQSLOD=0.8583;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:8:15.51:0,16,254	1/1:2,1:4:6.97:37,7,0	0/0:44,0:16:21.03:0,21,308	0/0:64,0:19:34.69:0,35,391	0/0:6,0:7:12.51:0,13,174	0/0:11,0:10:26.45:0,26,354	0/1:23,0:23:90.02:90,0,378	1/1:22,5:27:49.42:299,49,0	0/0:9,0:9:10.64:0,11,204	1/1:21,4:26:38.24:307,38,0	1/1:14,1:14:5:36,5,0	1/1:14,1:14:30.80:139,31,0	0/1:20,3:25:7.45:104,0,7	1/1:12,1:15:22.98:119,23,0	1/1:15,3:18:24.73:159,25,0	1/1:20,0:20:22.82:123,23,0	1/1:7,1:8:8.26:83,8,0	1/1:5,1:5:4.24:47,4,0	0/1:12,0:12:2:2,0,113	0/1:7,0:8:18.33:18,0,118	0/1:16,0:15:0.76:1,0,251	1/1:14,3:18:40.98:301,41,0	1/1:17,3:21:41.26:291,41,0	1/1:14,1:15:4.86:59,5,0	0/0:8,0:8:18.06:0,18,259	1/1:23,4:28:43.80:344,44,0	1/1:13,0:13:13.09:77,13,0	0/1:3,0:3:1.92:8,0,2
chr10	9642703	.	A	AG	7224.07	PASS	AB=0.830;AC=41;AF=0.732;AN=56;BaseQRankSum=8.937;DP=452;FS=9.916;HRun=1;HaplotypeScore=211.2972;InbreedingCoeff=0.3589;MQ=51.47;MQ0=13;MQRankSum=-8.090;QD=20.07;ReadPosRankSum=4.329;VQSLOD=3.8532;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:8,0:9:5.29:5,0,230	1/1:2,2:4:9.29:102,9,0	0/1:47,0:17:15.05:15,0,291	0/0:67,0:21:28.17:0,28,380	0/0:7,0:7:12.93:0,13,170	0/0:11,0:10:25.48:0,25,339	0/1:19,1:22:99:168,0,360	1/1:8,11:23:62.51:718,63,0	0/1:6,0:8:56.22:56,0,167	1/1:9,9:21:48.45:565,48,0	1/1:1,9:11:10.21:170,10,0	1/1:4,10:14:38.07:484,38,0	1/1:9,14:23:19.99:591,20,0	1/1:3,9:14:34.33:425,34,0	1/1:5,7:17:47.28:538,47,0	1/1:5,11:17:48.03:579,48,0	1/1:3,2:7:15.03:177,15,0	1/1:1,1:4:12.02:161,12,0	0/1:3,0:8:98.73:99,0,101	0/1:6,0:6:19.85:20,0,114	0/1:9,0:13:44.71:45,0,242	1/1:7,9:18:47.41:515,47,0	1/1:6,9:18:40.87:435,41,0	1/1:4,4:14:17.37:185,17,0	0/0:7,0:7:18.06:0,18,252	1/1:9,8:22:51.32:648,51,0	1/1:5,7:12:32.59:404,33,0	1/1:1,2:3:9.03:119,9,0
chr10	9642708	.	GA	G	952.16	PASS	AB=0.863;AC=19;AF=0.339;AN=56;BaseQRankSum=6.148;DP=480;FS=3.529;HRun=1;HaplotypeScore=235.2950;InbreedingCoeff=-0.4910;MQ=52.51;MQ0=12;MQRankSum=-4.813;QD=3.28;ReadPosRankSum=-0.606;VQSLOD=-0.3226;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:9,1:10:11.04:11,0,355	0/1:4,1:5:3:3,0,56	0/0:46,0:18:37.32:0,37,426	0/0:72,0:22:48.34:0,48,588	0/0:8,0:8:18.53:0,19,288	0/0:10,0:9:24.08:0,24,383	0/1:19,4:22:38.51:39,0,393	0/1:17,6:23:99:147,0,389	0/0:8,0:8:9.25:0,9,275	0/1:13,8:20:99:110,0,206	0/1:13,3:14:13.44:13,0,110	0/0:15,1:16:26.76:0,27,435	0/1:22,3:25:26:26,0,417	0/0:13,3:16:32.49:0,32,351	0/1:18,0:18:29.66:30,0,318	0/1:17,0:17:39.53:40,0,316	0/1:8,0:8:17.32:17,0,117	0/0:5,0:5:10.24:0,10,107	0/1:4,4:8:99:134,0,167	0/1:7,1:7:13.56:14,0,129	0/1:11,4:15:13.09:13,0,296	0/1:11,8:19:80.36:159,0,80	0/1:13,7:20:88.87:104,0,89	0/1:12,2:14:7.14:7,0,142	0/0:7,0:7:21.07:0,21,335	0/1:19,3:22:99:178,0,177	0/1:14,0:14:52.04:52,0,242	0/1:4,0:4:12.20:12,0,116
chr10	9642709	.	A	AG	1410.25	PASS	AB=0.906;AC=16;AF=0.286;AN=56;BaseQRankSum=6.946;DP=482;FS=2.539;HRun=1;HaplotypeScore=247.2984;InbreedingCoeff=-0.4362;MQ=51.18;MQ0=12;MQRankSum=-4.482;QD=5.60;ReadPosRankSum=-1.875;VQSLOD=-0.3570;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:0.92:0,1,284	0/1:5,0:5:26.85:49,0,27	0/0:47,0:17:21.48:0,21,370	0/0:72,1:23:35.45:0,35,494	0/0:9,0:9:15.11:0,15,228	0/0:9,0:8:24.08:0,24,311	0/1:23,0:22:99:103,0,305	0/1:22,1:23:99:148,0,326	0/0:8,0:8:17.98:0,18,233	0/1:19,2:20:99:243,0,143	0/1:14,2:14:18.89:19,0,119	0/0:16,0:16:5.50:0,5,347	0/1:22,3:25:58.96:59,0,342	0/0:16,0:16:30.27:0,30,294	0/1:16,2:18:62.37:62,0,229	0/1:14,3:17:67.76:68,0,261	0/1:7,1:8:11.39:11,0,95	0/0:5,0:5:13.29:0,13,126	0/1:8,0:8:76.53:77,0,131	0/1:8,0:7:6.81:7,0,104	0/0:15,0:15:16.34:0,16,262	0/1:18,2:20:68.74:190,0,69	0/1:18,2:20:92.34:122,0,92	0/0:13,1:14:0.33:0,0,124	0/0:7,0:7:21.07:0,21,273	0/1:18,4:22:99:309,0,120	0/1:9,5:14:78.07:78,0,223	0/1:3,1:4:18.98:19,0,103
chr10	9642716	.	A	AG	601.10	PASS	AB=0.913;AC=12;AF=0.214;AN=56;BaseQRankSum=8.324;DP=460;FS=0.842;HRun=2;HaplotypeScore=223.9395;InbreedingCoeff=-0.2679;MQ=51.98;MQ0=12;MQRankSum=-6.127;QD=2.84;ReadPosRankSum=-0.860;VQSLOD=-0.5901;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:30.54:0,31,401	0/1:5,0:5:14.68:15,0,103	0/1:45,0:19:1.11:1,0,389	0/0:70,0:21:20.11:0,20,443	0/0:9,0:9:16.48:0,16,249	0/0:9,0:8:24.08:0,24,336	0/0:15,1:16:28.34:0,28,413	0/0:20,0:20:3.26:0,3,541	0/0:10,0:10:13.19:0,13,298	0/1:15,4:18:83.32:83,0,288	0/1:10,4:12:18.49:18,0,122	0/0:15,0:15:11.11:0,11,449	0/1:23,2:25:99:122,0,499	0/0:16,1:17:27.92:0,28,415	0/0:18,0:18:11.15:0,11,294	0/1:18,0:18:99:109,0,430	0/0:8,0:8:13.79:0,14,176	0/0:5,0:5:13.29:0,13,136	0/0:5,0:5:15.04:0,15,193	0/0:7,0:6:12.04:0,12,168	0/0:17,0:17:27.43:0,27,293	0/1:13,6:19:45.65:46,0,140	0/1:13,5:18:71.20:71,0,144	0/1:12,0:12:1.54:2,0,162	0/0:9,0:9:24.08:0,24,335	0/1:16,1:17:99:145,0,203	0/1:14,1:15:99:105,0,302	0/1:5,0:5:26.09:26,0,135
chr10	9642734	.	A	AGAAG	2663.78	PASS	AB=0.964;AC=20;AF=0.400;AN=50;BaseQRankSum=-2.862;DP=424;FS=6.657;HRun=0;HaplotypeScore=191.3100;InbreedingCoeff=0.8164;MQ=51.07;MQ0=7;MQRankSum=1.541;QD=16.75;ReadPosRankSum=-1.581;VQSLOD=2.3451;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:7,8:15:33.09:670,33,0	0/0:6,0:6:12.03:0,12,160	./.	./.	1/1:9,2:11:12.91:209,13,0	1/1:8,3:12:21.03:386,21,0	1/1:15,3:18:21.50:382,22,0	0/1:23,0:21:0:0,0,0	0/0:11,0:11:21.07:0,21,312	0/0:13,0:15:6.01:0,6,57	0/0:14,0:12:15.05:0,15,228	0/0:18,0:18:27.09:0,27,411	0/0:21,0:21:24.08:0,24,365	0/0:18,0:18:21.03:0,21,294	0/0:13,0:18:15.02:0,15,140	0/0:18,0:18:24.06:0,24,335	0/0:11,0:9:11.97:0,12,133	0/0:12,0:12:27.09:0,27,406	1/1:7,0:6:3:27,3,0	./.	1/1:15,0:17:12.42:145,12,0	0/0:10,0:13:12.04:0,12,183	0/1:12,0:13:0.33:0,0,82	0/0:15,0:16:20.73:0,21,319	1/1:11,3:14:21.03:437,21,0	1/1:10,2:12:12.04:257,12,0	1/1:10,3:15:18.04:337,18,0	0/0:4,0:4:3.01:0,3,46
chr10	9643020	.	G	GT	7317.01	PASS	AB=0.712;AC=32;AF=0.571;AN=56;BaseQRankSum=-14.690;DP=636;FS=9.735;HRun=11;HaplotypeScore=95.4687;InbreedingCoeff=0.5817;MQ=80.59;MQ0=1;MQRankSum=-0.456;QD=16.37;ReadPosRankSum=-0.709;VQSLOD=4.5998;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:1,0:30:50.92:0,51,147	0/1:1,6:7:8.18:107,0,8	0/1:28,1:26:6.87:7,0,143	0/1:22,1:21:10.89:11,0,85	0/0:5,0:29:48.88:0,49,141	0/0:7,0:24:36.65:0,37,106	0/0:2,0:18:34.96:0,35,102	1/1:7,26:34:40.63:747,41,0	0/0:2,0:14:24.44:0,24,71	1/1:7,16:24:30.83:458,31,0	1/1:7,25:33:45.66:609,46,0	1/1:5,16:23:15.54:310,16,0	0/1:8,11:19:4.37:318,0,4	1/1:5,15:21:12.75:292,13,0	0/1:6,18:25:5.99:442,0,6	1/1:1,21:22:51.09:518,51,0	1/1:7,18:25:45.09:456,45,0	1/1:1,18:21:51.66:487,52,0	0/0:13,0:14:31.87:0,32,235	0/0:26,0:30:70.86:0,71,511	0/0:8,0:8:20.90:0,21,162	1/1:4,17:21:39.02:383,39,0	1/1:3,20:23:1.63:378,2,0	1/1:2,22:25:62.95:618,63,0	0/0:2,0:22:45.77:0,46,147	0/1:10,18:29:51.65:408,0,52	1/1:2,25:27:51.46:503,51,0	1/1:1,11:13:9.67:265,10,0
chr10	9643982	.	C	CA	21035.88	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-18.543;DP=908;FS=0.794;HRun=2;HaplotypeScore=84.4456;InbreedingCoeff=0.9993;MQ=73.65;MQ0=0;MQRankSum=-2.786;QD=38.32;ReadPosRankSum=3.442;VQSLOD=5.3848;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:56:99:0,153,1896	1/1:0,17:17:48.16:691,48,0	0/0:28,0:28:80.93:0,81,930	0/0:24,0:23:65.99:0,66,752	0/0:32,0:32:93.29:0,93,1153	0/0:24,0:24:69.21:0,69,855	0/0:28,0:28:84.25:0,84,1029	1/1:3,28:31:84.28:1210,84,0	0/0:34,0:34:99:0,102,1252	1/1:0,37:37:99:1562,111,0	1/1:1,20:21:57.18:804,57,0	1/1:3,39:42:93.31:1339,93,0	1/1:2,38:40:99:1584,111,0	1/1:5,32:37:87.29:1249,87,0	1/1:4,46:50:99:1901,132,0	1/1:1,44:45:99:1772,123,0	1/1:0,38:38:99:1599,111,0	1/1:1,22:23:22.56:743,23,0	0/0:15,0:15:45.10:0,45,541	0/0:22,0:22:57.18:0,57,707	0/0:73,0:73:99:0,214,2640	1/1:3,29:32:81.27:1166,81,0	1/1:2,16:18:48.12:668,48,0	1/1:0,42:42:99:1685,117,0	0/0:23,0:23:66.21:0,66,818	1/1:0,28:28:84.28:1210,84,0	1/1:3,37:40:99:1507,105,0	1/1:0,8:8:24.08:346,24,0
chr10	9644691	.	GCA	G	4766.30	PASS	AB=0.982;AC=43;AF=0.768;AN=56;BaseQRankSum=9.751;DP=670;FS=11.056;HRun=0;HaplotypeScore=126.0694;InbreedingCoeff=0.3011;MQ=68.90;MQ0=5;MQRankSum=-4.953;QD=7.81;ReadPosRankSum=9.957;VQSLOD=2.1070;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:37,0:36:46.35:316,46,0	1/1:5,0:5:13.15:52,13,0	0/0:17,0:18:40.13:0,40,595	0/0:15,0:13:35.90:0,36,505	1/1:26,0:26:37.15:250,37,0	1/1:32,0:31:21.88:211,22,0	0/1:24,0:24:24.11:108,0,24	0/1:24,0:24:33.15:88,0,33	0/0:26,0:26:46.42:0,46,289	1/1:24,0:24:20.67:132,21,0	1/1:20,0:20:20.93:170,21,0	1/1:27,1:27:23.10:221,23,0	1/1:24,1:25:44.65:293,45,0	1/1:22,0:22:28.65:225,29,0	1/1:19,1:20:1.77:159,2,0	1/1:27,0:27:15.36:206,15,0	1/1:25,0:24:7.92:187,8,0	1/1:22,0:21:24.85:174,25,0	0/1:21,0:21:7.83:121,0,8	0/1:33,0:33:11.01:233,0,11	1/1:21,0:21:32.01:192,32,0	1/1:27,0:27:14.31:234,14,0	0/1:28,1:29:23.62:200,0,24	1/1:36,0:35:12.08:253,12,0	0/1:17,2:19:1.82:160,0,2	0/1:21,0:21:7.25:126,0,7	1/1:29,0:28:50.55:287,51,0	1/1:13,0:13:36.13:171,36,0
chr10	9644693	.	ACC	A	17322.76	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-8.196;DP=673;FS=15.683;HRun=9;HaplotypeScore=87.6286;InbreedingCoeff=0.9847;MQ=67.82;MQ0=5;MQRankSum=-4.491;QD=28.26;ReadPosRankSum=3.447;VQSLOD=3.4642;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,36:36:87.26:1013,87,0	1/1:0,6:6:15.04:175,15,0	0/0:18,0:17:30.20:0,30,440	0/0:16,0:14:26.92:0,27,431	1/1:0,26:26:66.18:767,66,0	1/1:2,31:32:72.21:839,72,0	1/1:2,21:23:39.11:454,39,0	1/1:2,21:23:60.13:675,60,0	0/0:1,1:26:12.97:0,13,123	1/1:1,23:24:69.16:773,69,0	1/1:1,20:21:48.14:558,48,0	1/1:4,26:29:69.20:804,69,0	1/1:2,23:25:72.21:839,72,0	1/1:1,20:21:54.15:629,54,0	1/1:3,17:20:51.14:594,51,0	1/1:2,25:27:66.19:769,66,0	1/1:1,22:23:62.92:711,63,0	1/1:1,20:20:51.15:594,51,0	1/1:2,20:22:57.11:640,57,0	1/1:3,30:33:78.22:908,78,0	1/1:1,20:21:60.18:698,60,0	1/1:2,27:29:66.11:750,66,0	1/1:5,24:29:69.20:803,69,0	1/1:4,32:35:78.22:909,78,0	1/1:4,16:20:45.13:523,45,0	1/1:2,17:19:51.11:571,51,0	1/1:1,29:30:75.22:873,75,0	1/1:1,12:13:39.12:452,39,0
chr10	9646840	.	G	GA	9664.19	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-14.946;DP=566;FS=0.332;HRun=8;HaplotypeScore=51.9736;InbreedingCoeff=0.9955;MQ=83.38;MQ0=0;MQRankSum=-2.500;QD=28.85;ReadPosRankSum=2.886;VQSLOD=4.9025;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:87.01:0,87,790	1/1:1,8:9:24.07:277,24,0	0/0:21,0:20:47.64:0,48,400	0/0:14,0:14:38.28:0,38,312	0/0:33,0:33:96.05:0,96,879	0/0:23,0:23:66.02:0,66,599	0/0:23,0:23:63:0,63,568	1/1:5,26:31:78.23:900,78,0	1/1:2,13:15:33.10:381,33,0	1/1:2,13:15:39.12:450,39,0	1/1:0,10:10:27.08:312,27,0	1/1:1,14:15:17.67:457,18,0	1/1:2,20:22:57.17:658,57,0	1/1:3,11:14:27.08:312,27,0	1/1:1,18:19:42.12:485,42,0	1/1:1,18:19:51.15:589,51,0	1/1:1,38:39:99:1281,111,0	1/1:2,12:14:36.11:415,36,0	0/0:25,0:24:56.99:0,57,515	0/0:28,0:28:66.01:0,66,601	0/0:10,0:10:27.01:0,27,247	1/1:5,13:18:39.12:448,39,0	1/1:0,17:17:45.13:519,45,0	1/1:2,20:22:51.15:589,51,0	0/0:22,0:22:57.03:0,57,522	1/1:3,20:23:60.18:692,60,0	1/1:1,27:27:62.72:727,63,0	1/1:0,5:5:15.04:173,15,0
chr10	9647813	.	GC	G	5159.19	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=-14.745;DP=566;FS=3.553;HRun=8;HaplotypeScore=85.4162;InbreedingCoeff=0.8564;MQ=89.97;MQ0=0;MQRankSum=-2.139;QD=22.63;ReadPosRankSum=4.503;VQSLOD=5.3863;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,35:42:65.92:920,66,0	0/0:4,0:4:12.01:0,12,120	0/0:22,1:23:36.09:0,36,417	0/0:20,0:20:24:0,24,249	1/1:0,20:20:57.09:550,57,0	1/1:0,16:16:45.07:434,45,0	1/1:1,23:24:69.11:666,69,0	0/0:16,0:16:36.07:0,36,385	0/0:17,0:17:17.36:0,17,107	0/0:18,0:18:27.07:0,27,306	0/0:13,0:13:21.05:0,21,240	0/0:30,0:30:78.21:0,78,894	0/0:21,0:21:30.61:0,31,478	0/0:19,0:19:28.26:0,28,465	0/0:12,0:12:33.96:0,34,371	0/0:21,0:21:33.19:0,33,511	0/0:29,0:29:62.28:0,62,830	0/0:22,0:22:54.10:0,54,599	1/1:5,21:26:63.09:608,63,0	1/1:3,14:17:42.07:405,42,0	1/1:5,25:31:80.13:753,80,0	0/0:14,0:14:31.32:0,31,348	0/1:20,0:20:11.64:12,0,332	0/0:20,0:20:59.93:0,60,643	1/1:2,30:32:84.13:811,84,0	0/0:20,1:21:2.85:0,3,435	0/0:17,0:17:14.49:0,14,404	0/0:1,0:1:3.01:0,3,36
chr10	9648655	.	T	TGATA	6006.18	PASS	AB=1.000;AC=27;AF=0.519;AN=52;BaseQRankSum=-1.340;DP=595;FS=0.997;HRun=0;HaplotypeScore=138.2718;InbreedingCoeff=0.7211;MQ=59.07;MQ0=8;MQRankSum=-0.774;QD=17.88;ReadPosRankSum=-1.156;VQSLOD=4.6204;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:18,1:20:23.44:370,23,0	0/0:6,0:17:38.84:0,39,332	./.	./.	1/1:18,12:30:39.13:907,39,0	0/0:34,0:34:54.18:0,54,828	0/0:8,0:8:6.02:0,6,85	0/1:35,0:33:20.86:21,0,32	1/1:12,0:15:21:296,21,0	0/0:18,0:28:32.97:0,33,292	0/0:17,0:24:26.98:0,27,243	1/1:14,9:21:18.06:420,18,0	1/1:16,5:20:30.03:587,30,0	1/1:5,1:14:24.08:428,24,0	0/0:18,0:18:33.08:0,33,480	0/0:23,0:24:45.07:0,45,660	1/1:14,10:25:21.07:490,21,0	0/1:22,0:22:39.86:40,0,530	1/1:13,0:14:6.02:104,6,0	1/1:21,0:30:39.12:610,39,0	1/1:12,0:12:12.03:164,12,0	1/1:11,13:24:27.08:630,27,0	1/1:9,16:26:39.12:907,39,0	0/0:18,0:18:21.05:0,21,302	0/0:29,0:29:54.10:0,54,773	0/1:21,0:21:29.62:30,0,271	0/0:17,0:17:12.04:0,12,184	0/0:15,0:15:12.04:0,12,184
chr10	9648759	.	T	TA	5552.52	PASS	AB=0.667;AC=29;AF=0.518;AN=56;BaseQRankSum=8.878;DP=571;FS=9.427;HRun=1;HaplotypeScore=200.8303;InbreedingCoeff=0.0245;MQ=50.80;MQ0=12;MQRankSum=-2.369;QD=14.09;ReadPosRankSum=0.863;VQSLOD=3.6528;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,1:25:43.87:0,44,625	0/1:1,4:5:24.28:121,0,24	0/0:26,0:15:39.11:0,39,511	0/0:27,0:16:41.10:0,41,492	0/1:19,9:28:99:291,0,705	0/1:14,1:15:20.46:20,0,440	0/0:15,0:14:39.13:0,39,546	0/0:30,0:20:23.80:0,24,402	1/1:4,18:22:4.10:390,4,0	1/1:9,19:25:5.56:733,6,0	1/1:6,22:27:8.36:140,8,0	0/1:7,13:17:76.67:77,0,94	1/1:6,17:22:40.24:496,40,0	1/1:0,9:8:9.03:136,9,0	0/1:3,11:13:18.75:126,0,19	0/1:2,22:24:3.92:370,0,4	0/1:3,3:6:26.34:106,0,26	0/1:3,7:10:16.10:278,0,16	0/0:20,0:20:60.17:0,60,788	0/1:19,3:22:64.01:64,0,692	0/0:32,1:32:64.23:0,64,965	1/1:11,17:27:22.73:326,23,0	0/1:4,12:16:23.11:81,0,23	1/1:2,9:11:3.74:49,4,0	0/1:17,2:19:76.79:77,0,608	1/1:13,17:26:8.92:731,9,0	0/1:6,18:24:8.10:686,0,8	0/1:2,9:11:16.29:256,0,16
chr10	9648762	.	TGA	T	3766.99	PASS	AB=0.694;AC=23;AF=0.411;AN=56;BaseQRankSum=8.704;DP=570;FS=16.708;HRun=0;HaplotypeScore=214.7889;InbreedingCoeff=0.1384;MQ=50.80;MQ0=12;MQRankSum=-3.297;QD=12.31;ReadPosRankSum=3.280;VQSLOD=2.2916;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:25:47.09:0,47,804	0/1:1,4:5:18.69:121,0,19	0/0:24,0:15:42.11:0,42,750	0/0:24,0:15:29.51:0,30,536	0/0:30,0:30:66.30:0,66,1161	0/0:14,0:15:35.81:0,36,631	0/0:16,0:15:38.98:0,39,756	0/0:33,0:23:36.82:0,37,475	0/1:21,0:21:13.13:13,0,147	0/1:18,11:25:1.96:529,0,2	1/1:10,19:28:6.60:133,7,0	0/1:14,8:19:74.98:75,0,78	1/1:9,14:22:40.87:499,41,0	1/1:1,8:8:9.03:135,9,0	0/1:6,7:13:13.50:95,0,14	1/1:11,10:21:0.46:268,0,0	0/1:4,3:7:23.02:77,0,23	0/1:5,4:9:21.73:175,0,22	0/0:19,0:19:57.16:0,57,1051	0/0:22,0:22:62.68:0,63,1126	0/0:34,0:33:69.63:0,70,1271	1/1:17,11:27:13.98:241,14,0	0/1:7,9:16:28.24:38,0,28	1/1:3,7:10:1.98:45,2,0	0/0:19,0:19:45.05:0,45,915	0/1:16,14:26:12.50:632,0,12	0/1:8,15:23:12.58:511,0,13	0/1:5,6:11:18.76:180,0,19
chr10	9648763	.	GA	G	1458.73	PASS	AB=0.895;AC=26;AF=0.464;AN=56;BaseQRankSum=9.686;DP=570;FS=9.281;HRun=2;HaplotypeScore=217.0377;InbreedingCoeff=0.3139;MQ=50.79;MQ0=11;MQRankSum=-0.588;QD=4.75;ReadPosRankSum=0.974;VQSLOD=-0.2892;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:24:38.47:0,38,512	1/1:5,0:5:7.99:48,8,0	0/0:23,0:15:41.34:0,41,567	0/0:25,0:15:34.53:0,35,428	0/0:30,0:30:33.31:0,33,783	0/0:15,0:15:27.97:0,28,421	0/0:16,0:15:39.08:0,39,537	0/0:34,0:24:69.05:0,69,875	0/1:22,0:22:25.44:25,0,134	0/1:24,4:24:93.90:196,0,94	1/1:25,4:28:8.68:65,9,0	0/1:19,3:19:39.98:71,0,40	1/1:20,3:22:12.73:113,13,0	1/1:9,0:8:7.21:32,7,0	1/1:13,0:13:3.45:12,3,0	1/1:13,8:21:4.45:77,4,0	0/1:7,0:7:29.57:41,0,30	0/1:7,2:9:57.95:79,0,58	0/0:20,0:20:53.89:0,54,728	0/0:22,0:22:58.70:0,59,797	0/0:34,0:33:64.84:0,65,841	1/1:20,9:28:21.43:166,21,0	0/1:15,0:15:11.28:44,0,11	1/1:10,0:10:1.71:7,2,0	0/0:19,0:19:39.96:0,40,618	0/1:22,8:26:99:315,0,123	1/1:19,4:23:9:233,9,0	0/1:9,3:12:36.41:123,0,36
chr10	9648764	.	A	AATAG	2516.17	PASS	AB=0.949;AC=39;AF=0.886;AN=44;BaseQRankSum=-1.010;DP=591;FS=0.000;HRun=0;HaplotypeScore=240.6884;InbreedingCoeff=0.0542;MQ=50.31;MQ0=12;MQRankSum=0.333;QD=5.32;ReadPosRankSum=0.999;VQSLOD=2.4095;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:19,6:26:3.48:70,3,0	./.	./.	./.	1/1:31,0:31:42.12:683,42,0	1/1:15,0:16:8.96:114,9,0	0/1:16,0:15:0:0,0,0	./.	1/1:23,0:22:15:211,15,0	0/1:28,0:24:26.67:121,0,27	0/1:31,0:30:0.46:0,0,1	1/1:22,0:19:5.72:28,6,0	1/1:23,0:22:10.12:88,10,0	./.	./.	1/1:21,0:21:2.19:25,2,0	1/1:7,0:7:3.01:45,3,0	1/1:9,0:9:2:9,2,0	1/1:16,4:20:12.04:257,12,0	1/1:22,0:22:9.03:151,9,0	0/1:23,11:34:32.86:195,0,33	0/1:31,0:30:3.63:18,0,4	1/1:16,0:16:5.19:28,5,0	1/1:10,0:10:1.75:5,2,0	1/1:20,0:19:21.02:325,21,0	1/1:30,0:26:17.44:112,17,0	1/1:23,0:23:9.71:62,10,0	1/1:12,0:12:8.97:67,9,0
chr10	9648768	.	G	GAT	4679.90	PASS	AB=0.891;AC=21;AF=0.375;AN=56;BaseQRankSum=9.675;DP=611;FS=4.639;HRun=0;HaplotypeScore=226.9425;InbreedingCoeff=-0.0889;MQ=49.85;MQ0=11;MQRankSum=-4.651;QD=12.12;ReadPosRankSum=3.332;VQSLOD=4.3897;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:27:2.12:0,2,372	1/1:4,1:5:9.03:110,9,0	0/0:18,0:12:32.90:0,33,426	0/1:22,0:14:2.18:2,0,273	0/0:32,0:31:16.79:0,17,627	0/0:15,0:15:22.74:0,23,274	0/0:15,0:14:32.91:0,33,447	0/1:56,9:52:99:906,0,229	0/0:23,0:22:56.23:0,56,753	0/1:25,4:25:99:528,0,133	0/1:28,3:30:30.57:102,0,31	0/1:17,5:21:65.94:66,0,68	0/1:19,5:23:14.25:505,0,14	1/1:8,0:8:9.03:119,9,0	0/1:14,1:13:4.51:69,0,5	0/1:19,2:21:87.12:223,0,87	1/1:9,0:9:10.01:137,10,0	0/1:8,1:9:58.73:230,0,59	0/0:19,0:19:16.45:0,16,470	0/0:22,0:22:37.37:0,37,726	0/0:33,0:32:23.17:0,23,653	0/1:26,5:30:99:163,0,153	0/1:15,2:17:1.76:34,0,2	0/1:11,0:11:5.74:37,0,6	0/0:20,0:19:30.69:0,31,427	0/1:26,6:28:99:719,0,129	0/1:19,4:23:47.17:510,0,47	0/1:10,2:12:70.51:219,0,71
chr10	9648770	.	TAG	T	4006.86	PASS	AB=0.931;AC=20;AF=0.357;AN=56;BaseQRankSum=9.032;DP=618;FS=3.488;HRun=0;HaplotypeScore=223.8687;InbreedingCoeff=-0.0929;MQ=49.97;MQ0=12;MQRankSum=-6.711;QD=10.74;ReadPosRankSum=3.008;VQSLOD=3.5862;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:33.46:0,33,450	1/1:5,0:5:9.03:110,9,0	0/0:18,0:12:32.90:0,33,426	0/1:22,0:14:2.18:2,0,273	0/0:31,0:30:87.27:0,87,1324	0/0:15,0:15:24.05:0,24,369	0/0:16,0:15:35.93:0,36,472	0/1:41,23:52:99:895,0,242	0/0:23,0:22:57.19:0,57,993	0/1:27,2:25:99:443,0,357	0/1:26,2:27:40.56:102,0,41	0/1:22,1:22:59.81:60,0,172	0/1:24,0:23:35.32:407,0,35	1/1:7,0:7:9.03:119,9,0	1/1:9,0:13:2.04:72,2,0	0/1:22,0:22:84.88:175,0,85	0/1:8,1:9:21.91:107,0,22	0/1:8,1:9:66.46:204,0,66	0/0:19,0:19:54.04:0,54,747	0/0:22,0:22:63.21:0,63,961	0/0:34,0:33:60.12:0,60,865	0/1:29,2:30:99:163,0,227	0/0:16,2:18:15.04:0,15,187	0/1:9,0:12:2.01:32,0,2	0/0:20,0:19:51.13:0,51,770	0/1:32,2:30:99:564,0,290	0/1:23,0:23:87.84:366,0,88	0/1:14,0:14:99:186,0,191
chr10	9648898	.	A	ATAGATGGG	13558.40	PASS	AB=1.000;AC=44;AF=0.786;AN=56;BaseQRankSum=-1.108;DP=668;FS=17.303;HRun=0;HaplotypeScore=182.6544;InbreedingCoeff=0.7275;MQ=53.71;MQ0=3;MQRankSum=-7.953;QD=25.78;ReadPosRankSum=-4.398;VQSLOD=2.2124;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:24,2:26:21.20:965,21,0	1/1:3,8:11:15.05:596,15,0	0/0:42,0:34:18.05:0,18,271	0/1:38,0:31:10.69:11,0,237	1/1:21,10:31:28.20:524,28,0	1/1:16,3:19:20.98:473,21,0	1/1:10,5:19:3.01:92,3,0	1/1:34,0:32:30.07:465,30,0	0/0:20,0:20:45.11:0,45,935	1/1:9,16:27:45.73:1416,46,0	1/1:7,14:24:14.83:311,15,0	1/1:19,0:19:26.95:579,27,0	1/1:6,8:15:15.05:616,15,0	1/1:8,6:16:15.05:617,15,0	1/1:5,19:26:27.09:1043,27,0	0/1:22,0:22:54.86:165,0,55	1/1:15,1:16:17.08:409,17,0	1/1:14,1:15:16.76:487,17,0	0/0:16,0:16:24.06:0,24,501	0/0:35,0:35:72.21:0,72,1577	0/0:29,0:29:48.08:0,48,1082	1/1:23,5:28:24.08:683,24,0	1/1:16,7:23:29.86:717,30,0	1/1:20,3:23:16.74:351,17,0	1/1:10,17:27:21.07:748,21,0	1/1:18,7:24:48.05:1477,48,0	1/1:23,0:23:33.03:568,33,0	1/1:10,9:19:6.02:247,6,0
chr10	9651098	.	GAGAC	G	462.16	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=7.703;DP=964;FS=3.913;HRun=0;HaplotypeScore=164.4234;InbreedingCoeff=0.5437;MQ=68.08;MQ0=10;MQRankSum=0.108;QD=4.92;ReadPosRankSum=-0.948;VQSLOD=2.6914;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,114,2629	0/0:12,0:12:19.58:0,20,600	0/0:43,0:30:3.61:0,4,455	0/1:64,0:40:10.44:10,0,339	0/0:29,0:29:72.25:0,72,1711	0/0:28,0:28:69.24:0,69,1653	0/0:38,0:38:87.30:0,87,2011	0/0:35,0:35:60.18:0,60,1342	1/1:11,19:29:37.93:554,38,0	0/0:47,2:49:23.83:0,24,2555	0/0:17,0:17:45.14:0,45,1019	0/0:24,0:24:69.24:0,69,1612	0/0:27,0:27:63.19:0,63,1411	0/0:39,0:39:90.30:0,90,2069	0/0:33,0:33:72.25:0,72,1692	0/0:32,1:33:81.28:0,81,1948	0/0:42,1:43:38.10:0,38,1927	0/0:31,0:31:75.20:0,75,1641	0/0:21,0:19:30.04:0,30,627	0/0:29,1:30:25.72:0,26,1566	0/0:53,0:53:96.29:0,96,2195	0/0:33,0:33:72.23:0,72,1608	0/0:29,1:30:13.71:0,14,1391	0/0:58,1:58:67.88:0,68,2605	0/0:35,0:35:81.28:0,81,1925	0/0:48,2:50:18.32:0,18,2455	0/0:25,0:25:51.18:0,51,1237	0/0:7,0:7:6.02:0,6,147
chr10	9651126	.	GAGAGAC	G	111.46	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.123;DP=962;FS=2.966;HRun=0;HaplotypeScore=193.8521;InbreedingCoeff=0.8431;MQ=59.36;MQ0=21;MQRankSum=-2.940;QD=4.85;ReadPosRankSum=-3.997;VQSLOD=1.8950;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:51:99:0,135,3867	0/0:13,0:13:29.92:0,30,930	0/0:35,0:11:23.19:0,23,566	0/0:72,0:26:34:0,34,867	0/0:29,0:29:78.21:0,78,2259	0/0:28,0:28:78.24:0,78,2366	0/0:35,0:35:96.31:0,96,2979	0/0:45,0:44:99:0,114,3196	1/1:9,14:22:19.82:203,20,0	0/0:57,0:57:99:0,144,4273	0/0:18,0:18:45.13:0,45,1316	0/0:25,0:25:63.18:0,63,1823	0/0:25,0:25:53.15:0,53,1996	0/0:34,0:34:90.30:0,90,2824	0/0:40,0:40:99:0,105,3013	0/0:35,1:36:99:0,99,2895	0/0:46,0:46:99:0,120,3654	0/0:34,0:33:87.26:0,87,2669	0/0:15,0:13:33:0,33,872	0/0:27,0:26:69.21:0,69,2009	0/0:47,0:47:99:0,108,2988	0/0:32,0:32:86.93:0,87,2445	0/0:27,0:27:75.22:0,75,1934	0/0:58,0:57:99:0,126,3849	0/0:33,0:33:96.32:0,96,3091	0/0:49,0:49:99:0,126,4072	0/0:24,0:24:63.16:0,63,1778	0/0:2,0:2:3.01:0,3,104
chr10	9651196	.	CAGACAGAG	C	1185.54	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=7.338;DP=766;FS=0.000;HRun=0;HaplotypeScore=189.0164;InbreedingCoeff=0.9123;MQ=55.68;MQ0=10;MQRankSum=-3.212;QD=16.47;ReadPosRankSum=0.120;VQSLOD=2.8901;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:34:72.24:0,72,2334	0/0:12,0:12:27.09:0,27,836	0/0:23,0:15:12.03:0,12,208	0/0:45,0:12:12.04:0,12,264	0/0:22,0:21:48.15:0,48,1343	0/0:19,0:19:39.10:0,39,1059	0/0:32,0:31:72.21:0,72,1830	0/0:57,0:57:99:0,117,2404	0/0:11,0:11:18.06:0,18,475	0/0:35,0:35:75.26:0,75,2302	0/0:18,0:18:42.14:0,42,1250	0/0:22,0:23:44.02:0,44,1570	0/0:27,0:27:69.24:0,69,2047	0/0:31,0:31:81.28:0,81,2544	0/0:40,0:40:84.09:0,84,2567	0/0:33,0:33:84.29:0,84,2540	0/0:42,0:42:93.23:0,93,2516	0/0:23,0:23:33.10:0,33,948	1/1:9,15:20:42.14:904,42,0	1/1:5,9:14:15.05:332,15,0	1/1:12,22:33:3.90:80,4,0	0/0:22,0:22:60.21:0,60,1600	0/0:21,0:20:42.06:0,42,1336	0/0:40,0:40:66.03:0,66,2072	0/0:19,0:19:45.12:0,45,1354	0/0:31,0:30:60.21:0,60,1969	0/0:22,0:22:45.15:0,45,1285	0/0:11,0:10:30.10:0,30,996
chr10	9651256	.	A	AAC	1382.80	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.182;DP=798;FS=0.712;HRun=0;HaplotypeScore=111.2786;InbreedingCoeff=0.9776;MQ=56.33;MQ0=18;MQRankSum=3.029;QD=41.90;ReadPosRankSum=1.381;VQSLOD=5.2103;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:37:96.13:0,96,1247	0/0:18,0:18:54.18:0,54,771	0/0:41,0:15:14.99:0,15,457	0/0:53,0:12:20.28:0,20,265	0/0:18,0:18:48.12:0,48,618	0/0:26,0:26:46.50:0,47,924	0/0:36,0:35:99:0,102,1395	0/0:50,0:48:99:0,126,1769	1/1:0,32:33:81.28:1478,81,0	0/0:31,0:30:84.27:0,84,1185	0/0:15,0:15:33:0,33,473	0/0:22,0:22:54.17:0,54,757	0/0:33,0:33:93.29:0,93,1296	0/0:30,0:30:87.29:0,87,1242	0/0:30,0:30:81.26:0,81,1142	0/0:37,0:37:99:0,105,1489	0/0:26,0:26:75.20:0,75,1049	0/0:25,0:25:66.19:0,66,909	0/0:27,0:23:66.18:0,66,898	0/0:15,0:15:30.10:0,30,430	0/0:30,0:30:33.06:0,33,436	0/0:19,0:19:48.16:0,48,687	0/0:15,0:15:39.12:0,39,541	0/0:40,0:40:99:0,99,1381	0/0:28,0:28:81.11:0,81,1131	0/0:23,0:23:66.22:0,66,945	0/0:30,0:30:90.29:0,90,1267	0/0:9,0:9:27.07:0,27,367
chr10	9652528	.	T	TACACACACAC	12424.91	PASS	AB=0.741;AC=33;AF=0.611;AN=54;BaseQRankSum=-3.351;DP=808;FS=1.417;HRun=0;HaplotypeScore=243.2459;InbreedingCoeff=0.6852;MQ=51.33;MQ0=13;MQRankSum=-8.788;QD=23.99;ReadPosRankSum=-7.290;VQSLOD=2.3773;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:37.93:0,38,1819	1/1:3,10:13:21.06:886,21,0	0/1:48,0:24:8.21:8,0,31	0/0:43,0:26:8.85:0,9,369	0/0:21,0:21:39.03:0,39,1017	0/0:25,0:25:52.57:0,53,1501	0/0:21,0:22:42.08:0,42,964	1/1:35,0:35:39.03:710,39,0	0/0:19,0:19:9.03:0,9,209	1/1:19,11:37:51.16:1695,51,0	1/1:5,7:17:8.75:217,9,0	1/1:17,14:35:18.06:796,18,0	1/1:12,14:31:30.57:1251,31,0	1/1:15,15:36:17.89:640,18,0	1/1:17,12:34:18.06:788,18,0	1/1:20,6:31:9.03:399,9,0	1/1:7,4:14:3.01:150,3,0	0/1:6,9:19:45.33:434,0,45	0/1:10,0:20:66.29:137,0,66	0/0:10,0:36:31.78:0,32,537	0/0:18,0:52:29.97:0,30,782	1/1:13,8:25:15.05:396,15,0	1/1:8,10:22:16.90:588,17,0	1/1:19,7:31:3.01:84,3,0	0/0:23,0:23:41.08:0,41,1334	1/1:18,18:41:66.15:2101,66,0	1/1:10,13:27:33.50:1143,34,0	./.
chr10	9652541	.	ACACACACAC	A	590.96	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.931;DP=808;FS=7.577;HRun=0;HaplotypeScore=261.7087;InbreedingCoeff=0.9215;MQ=51.76;MQ0=14;MQRankSum=-4.596;QD=45.46;ReadPosRankSum=-3.001;VQSLOD=1.8229;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,102,4299	0/0:12,0:12:23.96:0,24,781	0/0:54,0:25:53.50:0,54,1531	0/0:49,0:27:78.26:0,78,2516	0/0:22,0:22:66.21:0,66,2468	0/0:25,0:25:65.49:0,65,2967	0/0:19,0:19:54.16:0,54,2250	0/0:36,0:35:99:0,105,3154	1/1:1,12:13:35.81:686,36,0	0/0:36,0:36:99:0,102,3516	0/0:21,0:21:30.53:0,31,656	0/0:38,0:38:48.16:0,48,1308	0/0:34,0:34:52.42:0,52,1550	0/0:30,0:30:38.53:0,39,1250	0/0:34,0:34:45.15:0,45,1244	0/0:29,0:29:42.12:0,42,946	0/0:13,0:13:18.06:0,18,443	0/0:22,0:22:35.86:0,36,825	0/0:20,0:20:57.67:0,58,1838	0/0:34,0:34:87.30:0,87,3448	0/0:56,0:56:99:0,111,4242	0/0:24,0:24:47.79:0,48,1108	0/0:22,0:22:32.22:0,32,710	0/0:25,0:25:15.05:0,15,247	0/0:23,0:23:69.24:0,69,3222	0/0:40,0:40:99:0,118,3573	0/0:27,0:27:51.17:0,51,1661	0/0:9,0:8:9.03:0,9,231
chr10	9654906	.	TCA	T	843.57	PASS	AB=0.974;AC=26;AF=0.464;AN=56;BaseQRankSum=6.102;DP=447;FS=13.945;HRun=0;HaplotypeScore=107.9796;InbreedingCoeff=-0.5500;MQ=67.26;MQ0=8;MQRankSum=-5.332;QD=2.30;ReadPosRankSum=7.195;VQSLOD=0.0230;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:16,2:17:13.56:14,0,109	0/1:14,0:14:12.14:51,0,12	0/0:29,0:14:16.96:0,17,343	0/0:29,1:9:17.89:0,18,149	1/1:16,3:19:1.80:81,2,0	0/1:19,0:19:25.07:50,0,25	0/1:13,0:13:16.61:17,0,63	0/0:14,0:14:0.84:0,1,73	1/1:10,0:10:22.92:97,23,0	0/1:13,0:13:20.87:21,0,92	0/1:17,0:17:0.35:0,0,51	0/1:16,0:16:12.35:12,0,27	0/1:16,1:17:18.98:19,0,48	0/1:15,0:15:26.76:27,0,115	0/1:13,0:13:11.66:42,0,12	0/1:17,0:17:14.20:14,0,47	0/1:13,0:13:5.86:6,0,44	0/1:14,0:14:47.73:50,0,48	0/1:19,0:19:63.59:82,0,64	0/1:22,0:22:26.09:140,0,26	0/1:9,1:11:16.72:17,0,78	0/1:13,0:13:18.42:26,0,18	0/1:17,0:17:2:2,0,79	0/1:16,0:16:29.91:30,0,35	0/1:15,2:17:35.80:127,0,36	0/1:10,1:11:11.84:12,0,16	0/1:12,1:13:40.91:59,0,41	0/0:6,0:6:11.96:0,12,94
chr10	9654908	.	ACC	A	4586.06	PASS	AB=0.974;AC=51;AF=0.911;AN=56;BaseQRankSum=-2.779;DP=451;FS=10.963;HRun=12;HaplotypeScore=96.4347;InbreedingCoeff=0.5325;MQ=66.10;MQ0=9;MQRankSum=-0.736;QD=11.24;ReadPosRankSum=4.716;VQSLOD=2.3897;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:12,5:16:17.98:182,18,0	1/1:14,0:14:24.59:151,25,0	0/1:36,0:15:8.12:8,0,167	0/0:34,0:11:4.79:0,5,50	1/1:8,11:19:33.04:330,33,0	1/1:3,15:18:30.02:305,30,0	1/1:2,7:10:12:122,12,0	1/1:14,0:14:23.38:173,23,0	1/1:2,5:9:26.93:250,27,0	1/1:13,0:13:22.71:157,23,0	1/1:18,0:18:26.26:151,26,0	1/1:15,0:15:25.27:153,25,0	1/1:17,0:17:25.86:160,26,0	1/1:15,0:15:14.61:97,15,0	1/1:13,0:13:17.54:114,18,0	1/1:16,0:16:17.33:97,17,0	1/1:12,1:13:32.30:207,32,0	1/1:13,1:14:17.44:99,17,0	1/1:8,11:19:17.31:318,17,0	1/1:5,17:22:53.99:533,54,0	1/1:8,3:11:9.54:74,10,0	1/1:12,0:12:18.09:115,18,0	1/1:17,0:17:20.32:115,20,0	1/1:16,0:16:23.38:136,23,0	1/1:5,12:17:30.03:299,30,0	1/1:10,0:10:11.73:90,12,0	1/1:12,0:12:23.95:150,24,0	0/0:6,0:6:0:0,0,0
chr10	9654918	.	CCCA	C	5653.08	PASS	AB=0.983;AC=39;AF=0.696;AN=56;BaseQRankSum=-7.812;DP=532;FS=5.400;HRun=0;HaplotypeScore=119.3405;InbreedingCoeff=0.5170;MQ=64.94;MQ0=14;MQRankSum=-2.529;QD=15.49;ReadPosRankSum=2.893;VQSLOD=4.1003;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:17,0:16:44.52:45,0,111	1/1:4,12:16:26.85:395,27,0	0/0:63,0:22:36.63:0,37,428	0/0:49,0:14:7.83:0,8,110	0/1:28,0:28:12.89:13,0,351	0/0:18,0:18:29.32:0,29,130	0/0:10,0:10:16.80:0,17,88	1/1:3,12:15:11.87:378,12,0	0/1:10,0:11:27.53:28,0,49	1/1:2,11:13:29.49:336,29,0	1/1:2,18:21:29.97:419,30,0	1/1:1,16:18:26.97:392,27,0	1/1:3,15:18:26.30:358,26,0	1/1:2,13:15:14.76:217,15,0	1/1:3,16:19:21.33:281,21,0	1/1:3,19:22:20.69:282,21,0	1/1:11,2:12:36.06:502,36,0	1/1:4,10:14:21.03:301,21,0	0/0:17,0:17:31.30:0,31,170	0/1:20,0:20:6.42:6,0,70	0/0:10,0:10:2.72:0,3,91	1/1:2,14:16:21.44:283,21,0	1/1:1,22:23:20.70:327,21,0	1/1:2,16:18:23.84:376,24,0	0/1:17,0:17:41.58:42,0,119	1/1:8,5:13:21.09:287,21,0	1/1:9,5:14:26.76:370,27,0	1/1:0,4:4:2.90:16,3,0
chr10	9654919	.	CCA	C	2932.50	PASS	AB=1.000;AC=43;AF=0.768;AN=56;BaseQRankSum=3.441;DP=555;FS=7.139;HRun=0;HaplotypeScore=126.5879;InbreedingCoeff=0.2419;MQ=63.67;MQ0=14;MQRankSum=-2.607;QD=6.80;ReadPosRankSum=10.498;VQSLOD=1.1524;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:19,0:18:20.40:20,0,139	1/1:13,3:16:25.98:180,26,0	0/0:65,0:23:36.84:0,37,304	0/0:49,0:13:4.55:0,5,60	0/1:30,0:30:7.40:7,0,350	0/1:21,0:21:22.21:22,0,134	0/1:13,0:13:20.21:20,0,67	1/1:14,0:15:10.67:175,11,0	0/1:13,0:13:49.86:50,0,52	1/1:12,1:13:28.44:173,28,0	1/1:19,1:20:29.70:215,30,0	1/1:18,0:18:18.46:166,18,0	1/1:16,2:18:26.49:204,26,0	1/1:14,1:15:14.39:102,14,0	1/1:18,1:19:20.92:139,21,0	1/1:20,2:22:20.64:153,21,0	1/1:13,1:13:35.24:247,35,0	1/1:12,2:14:20.90:159,21,0	0/1:17,0:17:52.69:56,0,53	1/1:20,0:20:11.90:115,12,0	0/0:10,0:10:10.06:0,10,84	1/1:14,2:16:20.99:141,21,0	1/1:22,0:23:20.62:156,21,0	1/1:16,2:18:23.85:180,24,0	0/1:23,0:23:23.37:23,0,211	1/1:13,0:13:26.82:205,27,0	1/1:14,3:17:25.57:175,26,0	1/1:4,0:4:2.90:16,3,0
chr10	9654936	.	CAAA	C	814.25	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=2.712;DP=611;FS=13.439;HRun=15;HaplotypeScore=146.7649;InbreedingCoeff=0.7972;MQ=59.92;MQ0=13;MQRankSum=-3.486;QD=7.68;ReadPosRankSum=1.100;VQSLOD=-0.2549;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:19:42.79:0,43,431	0/0:15,0:15:20.65:0,21,226	0/0:69,0:23:29.59:0,30,217	0/1:52,0:15:19.99:20,0,46	0/0:32,0:32:87.07:0,87,1013	0/0:20,0:20:47.54:0,48,563	0/0:21,0:21:48.10:0,48,619	0/0:21,0:20:47.33:0,47,502	0/0:9,0:14:35.91:0,36,339	0/0:9,0:10:20.71:0,21,213	0/0:24,0:25:62.35:0,62,625	0/0:16,0:16:29.54:0,30,358	0/0:20,0:20:26.90:0,27,317	0/0:13,0:13:10.59:0,11,147	0/0:17,0:17:13.99:0,14,102	0/0:26,0:26:32.59:0,33,399	0/0:17,0:16:36.67:0,37,436	0/0:14,0:14:27.04:0,27,326	1/1:5,16:21:44.97:476,45,0	1/1:9,11:20:32.25:331,32,0	1/1:1,10:11:11.88:133,12,0	0/0:14,0:15:29.22:0,29,334	0/0:22,0:22:30.09:0,30,375	0/0:16,0:17:12.81:0,13,227	0/0:23,0:23:60:0,60,672	0/0:22,0:24:51.24:0,51,528	0/0:22,0:22:50.94:0,51,677	0/0:8,0:8:17.78:0,18,195
chr10	9654939	.	A	AC	1457.15	PASS	AB=0.969;AC=28;AF=0.500;AN=56;BaseQRankSum=0.412;DP=609;FS=7.805;HRun=0;HaplotypeScore=126.4625;InbreedingCoeff=-0.0330;MQ=61.34;MQ0=13;MQRankSum=1.013;QD=3.57;ReadPosRankSum=-3.744;VQSLOD=2.0474;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:18,1:18:7.56:80,8,0	0/1:13,0:13:9.86:29,0,10	0/0:77,0:24:2.30:0,2,162	0/0:56,0:14:9.14:0,9,109	0/1:31,0:31:9.11:59,0,9	0/1:20,1:21:4.11:99,0,4	0/1:20,0:20:6.33:6,0,93	0/1:20,0:19:15.94:16,0,62	0/0:14,0:14:38.67:0,39,346	1/1:10,0:10:14.26:76,14,0	0/1:22,2:24:36.31:100,0,36	0/1:15,1:16:25.55:26,0,75	0/1:20,0:20:12.13:12,0,69	0/0:11,0:11:9.45:0,9,51	1/1:16,1:17:4.01:36,4,0	0/1:27,0:27:8.84:9,0,81	0/1:16,1:16:36.70:59,0,37	0/0:14,0:14:7.37:0,7,26	1/1:20,0:20:48.20:261,48,0	1/1:19,0:19:47.28:266,47,0	1/1:11,0:11:13.58:74,14,0	0/1:13,0:13:18.54:24,0,19	0/0:21,0:21:3.72:0,4,14	1/1:17,1:18:12.02:112,12,0	0/1:21,3:24:40.59:156,0,41	0/1:24,1:25:0.35:91,0,0	0/1:22,1:23:36.72:37,0,131	0/0:8,0:8:5.87:0,6,45
chr10	9656780	.	G	GCACACACACA	13877.70	PASS	AB=0.593;AC=45;AF=0.804;AN=56;BaseQRankSum=2.767;DP=902;FS=0.914;HRun=0;HaplotypeScore=264.4083;InbreedingCoeff=0.7152;MQ=51.44;MQ0=25;MQRankSum=-9.093;QD=21.92;ReadPosRankSum=-3.427;VQSLOD=3.0959;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:36:8.70:154,9,0	1/1:11,0:11:9:216,9,0	0/0:63,0:29:21.05:0,21,461	0/0:58,0:31:15.04:0,15,272	1/1:9,0:22:0.47:2,0,0	1/1:7,0:19:9.03:150,9,0	1/1:13,0:32:5.91:177,6,0	1/1:41,0:40:65.14:1411,65,0	1/1:15,0:29:12.04:457,12,0	1/1:21,18:38:45.07:1356,45,0	1/1:11,9:19:2.34:54,2,0	1/1:19,9:30:18.06:557,18,0	1/1:14,16:32:21.07:1024,21,0	1/1:20,8:31:26.98:627,27,0	1/1:18,16:33:33.11:1444,33,0	1/1:14,16:33:42.14:1720,42,0	1/1:22,7:33:12.04:411,12,0	1/1:8,5:14:9.03:354,9,0	0/0:26,0:25:47.43:0,47,1215	0/0:20,0:22:51.15:0,51,1188	0/0:91,0:100:99:0,153,5214	1/1:18,0:27:4.96:180,5,0	1/1:10,0:19:21.43:87,21,0	0/1:11,0:35:87.98:88,0,236	1/1:12,0:22:14.96:373,15,0	1/1:18,1:27:48.15:1267,48,0	1/1:11,9:23:39.13:1284,39,0	1/1:7,3:11:12.04:485,12,0
chr10	9657340	.	CCAAAGAGGGCATCATATCTA	C	25105.76	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=17.300;DP=558;FS=2.592;HRun=0;HaplotypeScore=366.6153;InbreedingCoeff=0.9633;MQ=72.33;MQ0=0;MQRankSum=-15.981;QD=95.82;ReadPosRankSum=4.615;VQSLOD=3.7810;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:90.31:0,90,7983	1/1:2,5:7:15.05:825,15,0	0/0:22,0:22:60.18:0,60,3319	0/0:12,0:12:30.10:0,30,1723	0/0:40,0:40:99:0,120,10865	0/0:26,0:26:78.25:0,78,6521	0/0:21,0:21:60.21:0,60,5298	1/1:13,5:18:15.02:433,15,0	0/0:24,0:24:69.24:0,69,6017	1/1:4,20:24:66.23:3378,66,0	1/1:6,7:13:24.08:1034,24,0	1/1:4,9:13:18.06:849,18,0	1/1:3,4:7:12.04:596,12,0	1/1:2,13:15:24.08:1254,24,0	1/1:2,14:16:39.13:2005,39,0	1/1:1,14:14:36.12:1994,36,0	1/1:8,14:22:30.10:1669,30,0	1/1:6,8:14:21.07:1175,21,0	0/0:33,0:33:93.31:0,93,6641	0/0:34,0:34:99:0,102,9245	0/0:22,0:22:66.23:0,66,6008	1/1:1,10:11:27.09:1291,27,0	1/1:5,11:16:30.10:1446,30,0	1/1:4,15:19:23.70:804,24,0	0/0:28,0:28:84.29:0,84,7402	1/1:6,20:26:60.18:3169,60,0	1/1:3,19:22:54.19:3016,54,0	1/1:3,1:4:3.01:168,3,0
chr10	9657557	.	TTG	T	537.35	PASS	AB=0.892;AC=26;AF=0.542;AN=48;BaseQRankSum=0.496;DP=604;FS=12.929;HRun=0;HaplotypeScore=93.4709;InbreedingCoeff=0.3490;MQ=60.13;MQ0=18;MQRankSum=-1.892;QD=1.91;ReadPosRankSum=2.046;VQSLOD=0.8314;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:40:12.49:0,12,138	1/1:4,1:5:3.01:32,3,0	./.	./.	0/0:28,0:27:17.94:0,18,167	0/0:29,0:28:9:0,9,92	0/0:26,0:25:3.58:0,4,27	./.	1/1:16,0:27:16.13:71,16,0	1/1:14,3:16:0.98:29,1,0	1/1:14,1:15:3:32,3,0	1/1:13,5:19:11.86:109,12,0	1/1:10,0:10:2.99:26,3,0	0/1:21,4:25:31.55:83,0,32	1/1:14,3:17:3.01:32,3,0	0/1:16,7:22:11.01:26,0,11	1/1:24,9:32:9.02:95,9,0	0/1:15,1:16:9.80:76,0,10	0/1:16,0:15:12.98:18,0,13	0/0:15,0:15:3.01:0,3,44	0/0:37,0:32:17.74:0,18,129	1/1:12,0:11:0.47:1,0,0	0/0:9,0:15:11.65:0,12,87	0/0:37,0:37:29.84:0,30,233	0/0:19,0:19:21.46:0,21,192	1/1:27,0:26:0.14:48,0,0	1/1:17,0:19:2.84:14,3,0	./.
chr10	9659230	.	T	TTGTCTGTCTCTC	23095.70	PASS	AB=1.000;AC=46;AF=0.821;AN=56;BaseQRankSum=6.248;DP=530;FS=1.390;HRun=0;HaplotypeScore=197.2677;InbreedingCoeff=0.2300;MQ=64.14;MQ0=0;MQRankSum=-8.525;QD=47.72;ReadPosRankSum=2.887;VQSLOD=4.3168;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:27:30.10:1370,30,0	1/1:9,0:9:2.75:140,3,0	0/0:26,0:25:45.15:0,45,1107	0/0:20,0:20:29.99:0,30,785	0/1:20,0:20:0.91:964,0,1	1/1:21,0:21:39.13:1826,39,0	0/1:15,0:15:36.95:269,0,37	1/1:32,0:32:36.77:832,37,0	0/1:19,0:19:10.21:545,0,10	1/1:18,0:18:16.47:1216,16,0	0/1:22,0:22:8.95:548,0,9	1/1:23,0:23:33.11:1547,33,0	1/1:18,0:18:5.11:1239,5,0	1/1:11,0:11:18.06:843,18,0	1/1:19,0:19:5.11:1243,5,0	1/1:21,0:20:15.05:704,15,0	1/1:19,0:19:8.82:419,9,0	0/1:11,0:11:0.94:678,0,1	1/1:16,0:16:18.93:740,19,0	1/1:16,0:16:24.08:1292,24,0	1/1:17,3:22:12.51:646,13,0	1/1:12,0:12:15.05:707,15,0	1/1:14,0:14:12.04:555,12,0	1/1:22,0:22:18.53:712,19,0	1/1:22,0:22:10.12:1381,10,0	0/1:22,0:22:20.85:1063,0,21	1/1:22,0:22:8.12:1374,8,0	1/1:11,0:11:3.03:245,3,0
chr10	9659240	.	C	CTCTGTCTGTCTGTCTG	39406.31	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-4.702;DP=674;FS=4.293;HRun=0;HaplotypeScore=179.3716;InbreedingCoeff=0.8238;MQ=59.72;MQ0=0;MQRankSum=-8.780;QD=63.25;ReadPosRankSum=5.404;VQSLOD=4.0534;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:8,13:33:27.09:2051,27,0	1/1:2,4:14:2.75:230,3,0	0/0:28,0:27:50.33:0,50,1488	0/0:23,0:23:50.28:0,50,1188	1/1:3,13:31:21.07:1606,21,0	1/1:1,17:34:39.13:2996,39,0	1/1:6,7:25:9.03:569,9,0	1/1:34,0:34:80.85:1664,81,0	1/1:6,1:28:14.79:1025,15,0	1/1:1,14:24:59.77:2557,60,0	1/1:8,8:23:12.04:921,12,0	1/1:1,16:25:33.11:2532,33,0	1/1:4,11:30:24.08:1843,24,0	1/1:4,7:15:18.06:1379,18,0	1/1:5,13:30:27.09:2073,27,0	1/1:3,12:29:15.03:1152,15,0	1/1:7,7:26:14.97:1115,15,0	1/1:4,8:20:18.06:1385,18,0	1/1:5,0:18:44.45:1158,44,0	1/1:4,0:23:24.08:1039,24,0	1/1:19,0:20:21.04:700,21,0	1/1:0,10:17:15.05:1149,15,0	1/1:3,7:15:12.04:902,12,0	1/1:20,0:20:30.07:1685,30,0	1/1:2,17:24:30.10:2305,30,0	1/1:8,10:25:45.13:2611,45,0	1/1:5,13:29:32.98:2314,33,0	1/1:11,0:11:21.07:444,21,0
chr10	9660269	.	CAT	C	4487.99	PASS	AB=1.000;AC=33;AF=0.589;AN=56;BaseQRankSum=10.872;DP=543;FS=26.328;HRun=0;HaplotypeScore=194.7174;InbreedingCoeff=0.5174;MQ=60.33;MQ0=1;MQRankSum=-11.010;QD=12.26;ReadPosRankSum=11.896;VQSLOD=2.3359;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:9.72:0,10,73	0/1:5,0:5:5.90:16,0,6	0/0:13,0:11:23.95:0,24,376	0/1:8,0:6:12.16:12,0,71	0/0:19,0:19:6.29:0,6,17	0/1:21,0:21:8.82:9,0,116	0/1:22,0:22:23.24:31,0,23	0/0:27,0:27:14.20:0,14,80	1/1:18,1:19:23.03:333,23,0	1/1:28,0:28:37.56:438,38,0	1/1:13,0:13:7.69:120,8,0	1/1:26,0:26:49.02:578,49,0	1/1:23,0:23:29.89:344,30,0	1/1:25,0:25:28.13:362,28,0	1/1:21,0:21:24.03:286,24,0	1/1:22,0:22:24.43:276,24,0	1/1:31,0:31:14.80:247,15,0	1/1:21,0:21:3.80:201,4,0	0/0:17,0:17:0.77:0,1,121	0/0:14,0:14:20.32:0,20,164	0/0:27,0:27:6.80:0,7,85	0/1:10,0:10:14.80:114,0,15	0/0:2,12:14:0.94:0,1,2	1/1:17,0:17:24.09:241,24,0	0/0:27,0:27:27.52:0,28,232	1/1:31,0:31:27.73:428,28,0	1/1:15,0:14:27.35:298,27,0	1/1:8,0:8:12.72:154,13,0
chr10	9661435	.	G	GAA	3544.36	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=-12.888;DP=767;FS=2.481;HRun=10;HaplotypeScore=168.8307;InbreedingCoeff=0.9272;MQ=72.41;MQ0=0;MQRankSum=2.831;QD=22.01;ReadPosRankSum=0.043;VQSLOD=1.2262;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,49:60:99:1461,105,0	0/0:12,0:12:20.81:0,21,123	0/0:20,0:16:20.77:0,21,234	0/0:26,0:24:46.09:0,46,443	1/1:3,12:19:41.40:448,41,0	1/1:1,19:21:30.10:446,30,0	1/1:1,28:33:74.68:1010,75,0	0/0:36,0:36:75.36:0,75,469	0/0:29,0:31:47.35:0,47,584	0/0:22,0:22:42.37:0,42,245	0/0:25,0:26:51.62:0,52,386	0/0:22,0:22:48.01:0,48,268	0/0:32,0:33:56.05:0,56,336	0/0:28,0:28:59.13:0,59,338	0/0:33,0:33:81.09:0,81,429	0/0:37,0:37:85.17:0,85,497	0/0:36,0:37:67.38:0,67,391	0/0:22,0:23:45.07:0,45,277	0/0:15,0:16:26.74:0,27,255	0/0:26,0:28:44.41:0,44,498	0/0:33,0:33:64.90:0,65,633	0/0:34,0:34:55.35:0,55,277	0/0:25,0:25:56.48:0,56,329	0/0:26,0:26:59.40:0,59,333	1/1:7,10:17:12.04:179,12,0	0/0:19,0:19:30.92:0,31,160	0/0:39,0:38:81.05:0,81,433	0/1:11,0:11:0.72:1,0,72
chr10	9661442	.	AAAAC	A	2433.71	PASS	AB=0.992;AC=19;AF=0.339;AN=56;BaseQRankSum=13.175;DP=743;FS=0.950;HRun=0;HaplotypeScore=192.0211;InbreedingCoeff=-0.3715;MQ=69.65;MQ0=0;MQRankSum=-4.500;QD=5.09;ReadPosRankSum=7.577;VQSLOD=1.9060;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:61,0:61:99:0,120,2204	0/1:14,0:14:45.18:45,0,69	0/0:16,0:12:32.55:0,33,537	0/0:26,0:24:37:0,37,1063	0/1:17,0:17:8.76:9,0,694	0/0:21,0:21:33.10:0,33,611	0/0:36,0:36:84.23:0,84,1508	0/1:37,0:37:99:246,0,197	0/0:27,0:27:75.22:0,75,1691	0/1:24,0:24:13.39:230,0,13	0/1:28,0:28:99:164,0,197	0/1:22,0:22:53.09:96,0,53	0/1:31,1:32:46.72:174,0,47	0/1:30,0:30:75.37:116,0,75	0/1:28,2:30:26.66:261,0,27	0/1:35,0:35:99:163,0,161	0/1:38,0:38:58.07:159,0,58	0/1:25,0:25:99:99,0,111	0/0:14,0:14:39.12:0,39,776	0/0:23,0:23:66.18:0,66,1607	0/0:29,0:29:84.27:0,84,1864	0/1:31,0:31:30.66:219,0,31	0/1:25,0:25:99:123,0,109	0/1:23,1:24:43.25:127,0,43	0/0:12,0:12:15.05:0,15,286	1/1:18,0:18:5.17:143,5,0	0/1:37,0:36:62.93:176,0,63	0/1:11,0:11:24.51:47,0,25
chr10	9661443	.	AAAC	A	12652.03	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-7.565;DP=742;FS=1.470;HRun=0;HaplotypeScore=146.5064;InbreedingCoeff=0.9931;MQ=69.67;MQ0=0;MQRankSum=-3.116;QD=27.62;ReadPosRankSum=3.342;VQSLOD=5.1916;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:63,0:63:99:0,123,1690	1/1:4,9:13:18.02:236,18,0	0/0:15,0:11:21.01:0,21,352	0/0:27,0:25:34.59:0,35,731	0/0:17,0:17:36.12:0,36,574	0/0:21,0:21:32.85:0,33,457	0/0:36,0:36:84.23:0,84,1164	1/1:10,26:36:81.15:1019,81,0	0/0:27,0:27:66.21:0,66,1262	1/1:3,21:24:63.06:738,63,0	1/1:7,21:28:53.91:638,54,0	1/1:4,18:22:42.14:606,42,0	1/1:7,25:32:57.13:806,57,0	1/1:5,25:30:51.17:736,51,0	1/1:7,23:30:77.83:1059,78,0	1/1:8,27:35:14.65:979,15,0	1/1:6,32:38:69.23:996,69,0	1/1:6,19:25:41.73:606,42,0	0/0:14,0:14:33.08:0,33,546	0/0:23,0:23:63.22:0,63,1244	0/0:30,0:30:78.24:0,78,1403	1/1:4,27:31:77.48:922,77,0	1/1:7,18:25:50.67:656,51,0	1/1:4,20:24:54.18:780,54,0	0/0:11,0:11:15.05:0,15,214	1/1:5,13:18:39.08:508,39,0	1/1:7,29:36:77.39:1036,77,0	1/1:4,7:11:24.07:329,24,0
chr10	9661444	.	AAC	A	5318.28	PASS	AB=0.982;AC=23;AF=0.411;AN=56;BaseQRankSum=8.275;DP=737;FS=3.966;HRun=0;HaplotypeScore=154.9827;InbreedingCoeff=0.1762;MQ=69.13;MQ0=0;MQRankSum=-1.097;QD=11.71;ReadPosRankSum=6.235;VQSLOD=4.0589;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:62,0:62:99:0,126,1200	0/1:13,0:13:45.33:86,0,45	0/0:14,1:11:1.46:0,1,353	0/0:26,0:24:56.70:0,57,808	0/0:18,0:18:17.54:0,18,404	0/0:22,0:22:32.17:0,32,333	0/0:36,0:36:84.07:0,84,810	0/1:35,1:36:74.13:430,0,74	0/0:26,0:26:72.10:0,72,1090	1/1:24,0:24:16.32:369,16,0	0/1:28,0:28:99:294,0,117	0/1:21,1:22:23.35:212,0,23	0/1:31,0:31:5.63:321,0,6	0/1:30,0:30:36.13:256,0,36	1/1:31,0:31:15.09:465,15,0	0/1:33,0:33:84.41:360,0,84	1/1:38,0:38:6.15:387,6,0	0/1:25,0:25:41.46:237,0,41	0/0:14,0:14:35.94:0,36,498	0/0:23,0:23:63.19:0,63,1032	0/0:30,0:30:83.50:0,83,1216	1/1:31,0:31:55.30:487,55,0	0/1:23,2:25:48.81:278,0,49	0/1:23,0:23:11.64:275,0,12	0/0:11,0:11:15.03:0,15,156	1/1:17,0:17:17.03:237,17,0	0/1:34,2:35:6.20:445,0,6	1/1:11,0:11:26.68:180,27,0
chr10	9661799	.	G	GACAC	1476.25	PASS	AB=0.917;AC=31;AF=0.596;AN=52;BaseQRankSum=-2.064;DP=494;FS=19.187;HRun=0;HaplotypeScore=118.5445;InbreedingCoeff=-0.2526;MQ=68.94;MQ0=12;MQRankSum=2.093;QD=3.94;ReadPosRankSum=-3.029;VQSLOD=0.2287;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:19:4.76:22,5,0	1/1:9,0:9:3.01:65,3,0	./.	./.	0/0:19,0:25:2.90:0,3,28	0/0:7,0:11:11.99:0,12,103	0/1:16,0:18:1.84:2,0,21	1/1:17,0:17:1.25:3,1,0	0/1:13,0:17:14.94:15,0,63	0/1:14,0:13:68.84:139,0,69	0/1:13,4:19:34.77:80,0,35	1/1:14,0:14:5.77:66,6,0	0/1:9,1:11:40.17:65,0,40	0/1:14,2:16:9:258,0,9	1/1:15,2:19:3.01:70,3,0	1/1:16,0:16:11.77:180,12,0	0/1:20,0:29:16.38:16,0,23	0/1:17,0:17:30.73:140,0,31	0/1:12,0:14:14.67:15,0,40	0/1:9,0:10:12.58:13,0,47	0/0:18,0:22:5.22:0,5,35	1/1:16,0:16:5.91:124,6,0	0/1:14,0:14:35.86:36,0,71	0/1:23,3:30:65.67:66,0,80	0/1:13,0:13:3.02:3,0,21	1/1:13,0:17:17.58:128,18,0	0/1:9,0:9:42.28:55,0,42	0/1:6,3:8:3.36:65,0,3
chr10	9662448	.	T	TA	5995.24	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-13.001;DP=708;FS=1.548;HRun=1;HaplotypeScore=67.7350;InbreedingCoeff=0.9958;MQ=82.38;MQ0=0;MQRankSum=-1.913;QD=40.51;ReadPosRankSum=1.545;VQSLOD=5.5405;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,51:51:99:2113,141,0	0/0:8,0:8:24.08:0,24,312	0/0:21,0:21:60.17:0,60,739	0/0:18,0:18:45.09:0,45,540	1/1:1,24:25:66.09:914,66,0	1/1:2,20:22:57.19:854,57,0	1/1:0,26:26:75.25:1124,75,0	0/0:36,0:36:99:0,102,1301	0/0:19,0:19:57.18:0,57,738	0/0:33,0:33:99:0,99,1284	0/0:20,0:20:60.20:0,60,779	0/0:22,0:22:63.20:0,63,818	0/0:17,0:17:51.17:0,51,660	0/0:28,0:28:84.27:0,84,1089	0/0:21,0:21:63.19:0,63,804	0/0:23,0:23:69.22:0,69,896	0/0:31,0:31:90.27:0,90,1139	0/0:18,0:18:54.18:0,54,699	0/0:28,0:28:72.22:0,72,920	0/0:33,0:33:99:0,99,1269	0/0:41,0:41:99:0,120,1525	0/0:32,0:32:90.29:0,90,1169	0/0:20,0:20:57.19:0,57,740	0/0:36,0:36:99:0,105,1363	1/1:0,24:24:66.22:989,66,0	0/0:24,0:24:69.22:0,69,896	0/0:26,0:25:72.23:0,72,935	0/0:5,0:5:15.03:0,15,180
chr10	9662923	.	T	TACACACACACAC	12314.42	PASS	AB=1.000;AC=47;AF=0.940;AN=50;BaseQRankSum=-3.001;DP=663;FS=0.000;HRun=0;HaplotypeScore=256.3999;InbreedingCoeff=0.1276;MQ=54.76;MQ0=13;MQRankSum=-0.699;QD=21.12;ReadPosRankSum=2.844;VQSLOD=3.5749;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:24:14.98:221,15,0	1/1:8,0:11:5.94:208,6,0	./.	./.	0/0:21,5:26:1.27:0,1,4	1/1:29,4:36:8.80:522,9,0	1/1:33,0:32:21.02:626,21,0	1/1:32,0:32:30.10:784,30,0	1/1:26,0:24:23.88:561,24,0	1/1:25,1:28:47.49:1717,47,0	1/1:15,0:14:3.01:174,3,0	1/1:24,5:31:14.83:749,15,0	1/1:21,0:19:14.98:465,15,0	1/1:20,4:26:27.09:1329,27,0	1/1:23,2:27:5.70:283,6,0	1/1:18,2:21:9.03:456,9,0	1/1:19,1:21:4.40:856,4,0	1/1:7,0:6:6.02:172,6,0	1/1:19,0:18:18.06:447,18,0	1/1:25,0:25:12.03:270,12,0	0/1:12,0:12:17.95:18,0,40	1/1:28,0:28:5.75:48,6,0	1/1:20,0:17:7.97:101,8,0	1/1:23,0:23:8.86:211,9,0	1/1:19,0:15:6:126,6,0	1/1:34,0:34:41.16:1418,41,0	1/1:36,0:34:24.06:554,24,0	./.
chr10	9663150	.	GA	G	2923.87	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=10.245;DP=656;FS=2.217;HRun=9;HaplotypeScore=65.3000;InbreedingCoeff=0.9997;MQ=81.69;MQ0=0;MQRankSum=-0.931;QD=21.82;ReadPosRankSum=1.838;VQSLOD=4.6466;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,26:28:66.03:604,66,0	0/0:16,0:16:48.14:0,48,554	0/0:24,0:23:45.02:0,45,475	0/0:17,0:16:31.83:0,32,311	1/1:4,27:31:78.02:713,78,0	1/1:1,22:23:57.03:522,57,0	1/1:1,30:31:87.04:794,87,0	0/0:34,0:34:87.24:0,87,989	0/0:22,0:22:54.16:0,54,623	0/0:23,0:23:57.16:0,57,646	0/0:28,0:28:69.21:0,69,796	0/0:26,0:26:72.21:0,72,831	0/0:16,0:16:45.13:0,45,520	0/0:22,0:22:60.17:0,60,681	0/0:26,0:26:78.22:0,78,891	0/0:22,0:22:57.15:0,57,640	0/0:21,0:20:60.17:0,60,682	0/0:19,0:19:54.13:0,54,610	0/0:20,0:20:57.14:0,57,642	0/0:28,0:28:78.21:0,78,881	0/0:10,0:10:27.08:0,27,312	0/0:28,0:29:78.06:0,78,880	0/0:26,0:26:75.22:0,75,860	0/0:15,0:15:39.12:0,39,450	1/1:1,20:21:51.02:467,51,0	0/0:27,0:27:69.20:0,69,787	0/0:35,0:35:99:0,105,1197	0/0:15,0:16:47.97:0,48,534
chr10	9664061	.	TTCTG	T	2754.92	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-7.933;DP=672;FS=12.998;HRun=0;HaplotypeScore=240.3576;InbreedingCoeff=0.9899;MQ=60.91;MQ0=7;MQRankSum=3.644;QD=23.96;ReadPosRankSum=1.770;VQSLOD=1.6188;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:12,17:27:48.16:774,48,0	0/0:11,0:11:24.08:0,24,377	0/0:31,0:19:24.08:0,24,514	0/0:39,0:33:28.58:0,29,456	1/1:6,19:25:45.14:711,45,0	1/1:6,12:17:33.10:514,33,0	1/1:15,10:25:27.08:416,27,0	0/0:45,0:45:87.28:0,87,1376	0/0:23,0:24:36.06:0,36,455	0/0:36,0:36:81.28:0,81,1339	0/0:15,0:15:23.98:0,24,385	0/0:14,0:13:33.11:0,33,539	0/0:29,0:28:60.20:0,60,986	0/0:21,0:19:30.10:0,30,482	0/0:38,0:37:39.13:0,39,618	0/0:27,0:27:42.61:0,43,689	0/0:12,0:12:18.05:0,18,271	0/0:11,0:10:18.04:0,18,266	0/0:25,0:25:30.10:0,30,484	0/0:18,0:18:36.11:0,36,565	0/0:20,0:20:15.05:0,15,246	0/0:21,0:21:36.12:0,36,568	0/0:24,0:24:36.12:0,36,582	0/0:25,0:24:27.08:0,27,416	1/1:6,12:18:33.10:516,33,0	0/0:26,0:26:63.21:0,63,1020	0/0:28,0:28:48.09:0,48,704	0/0:14,0:14:33.11:0,33,551
chr10	9664070	.	T	TCTGTCTGA	9707.53	PASS	AB=1.000;AC=41;AF=0.732;AN=56;BaseQRankSum=-5.486;DP=686;FS=4.639;HRun=0;HaplotypeScore=276.0791;InbreedingCoeff=0.7239;MQ=59.49;MQ0=14;MQRankSum=-1.956;QD=20.22;ReadPosRankSum=5.405;VQSLOD=3.5506;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:31:56.06:0,56,958	1/1:9,0:9:9.22:213,9,0	0/0:57,0:18:47.84:0,48,715	0/0:48,0:33:45.98:0,46,625	0/0:25,0:25:48.13:0,48,874	0/0:21,0:19:42.06:0,42,681	0/0:21,0:21:36.03:0,36,494	0/1:45,0:45:9.06:799,0,9	1/1:15,9:24:45.29:1385,45,0	0/1:37,0:37:8.62:753,0,9	1/1:14,0:14:27.04:272,27,0	1/1:14,0:13:36.06:355,36,0	1/1:30,0:29:49.33:625,49,0	1/1:20,0:18:30.04:317,30,0	1/1:32,0:31:38.97:422,39,0	1/1:27,0:27:60.03:573,60,0	1/1:12,0:12:9.16:203,9,0	1/1:11,0:10:23.36:198,23,0	1/1:23,0:23:13.98:447,14,0	1/1:17,0:17:42.05:401,42,0	1/1:17,0:17:17.89:165,18,0	1/1:25,0:25:41.77:443,42,0	1/1:20,0:20:39.07:418,39,0	1/1:24,0:23:19.01:333,19,0	0/1:18,0:18:15.02:15,0,662	1/1:25,0:25:46.71:573,47,0	1/1:24,0:24:17.72:456,18,0	1/1:12,0:12:33.07:344,33,0
chr10	9664074	.	T	TCTGA	20042.54	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=-10.080;DP=694;FS=5.418;HRun=0;HaplotypeScore=208.7271;InbreedingCoeff=0.9926;MQ=63.38;MQ0=14;MQRankSum=-3.431;QD=43.76;ReadPosRankSum=2.799;VQSLOD=4.9587;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:32:60.06:0,60,620	1/1:2,7:9:27.02:606,27,0	0/0:60,0:22:51.47:0,51,638	0/0:53,0:36:44.72:0,45,556	0/0:25,0:25:51.10:0,51,535	0/0:22,0:20:45.04:0,45,448	0/0:21,0:21:38.98:0,39,380	1/1:36,10:46:99:1610,126,0	1/1:22,0:22:19.95:587,20,0	1/1:17,17:34:98.93:1902,99,0	1/1:5,9:14:24.07:577,24,0	1/1:2,11:13:36.11:910,36,0	1/1:9,19:27:69.09:1579,69,0	1/1:8,13:19:30.09:734,30,0	1/1:6,27:32:39.03:1032,39,0	1/1:12,15:27:54.56:1222,55,0	1/1:6,6:12:26.98:493,27,0	1/1:5,6:10:24.01:444,24,0	1/1:1,22:25:71.78:1081,72,0	1/1:5,12:17:42.10:960,42,0	1/1:4,10:14:17.93:419,18,0	1/1:12,13:25:44.91:868,45,0	1/1:7,15:22:39.12:977,39,0	1/1:11,12:22:32.09:702,32,0	0/0:18,0:18:41.66:0,42,446	1/1:10,15:25:74.88:1422,75,0	1/1:10,14:24:56.97:1163,57,0	1/1:3,9:12:14.11:754,14,0
chr10	9664109	.	CCT	C	4840.77	PASS	AB=1.000;AC=38;AF=0.679;AN=56;BaseQRankSum=2.902;DP=618;FS=21.776;HRun=0;HaplotypeScore=258.2374;InbreedingCoeff=0.6224;MQ=55.08;MQ0=19;MQRankSum=-8.326;QD=12.94;ReadPosRankSum=0.457;VQSLOD=3.1373;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:34:18.93:0,19,213	1/1:0,4:6:15.05:188,15,0	0/0:33,0:13:29.59:0,30,416	0/0:66,2:29:32.85:0,33,527	0/0:38,0:35:15.47:0,15,160	0/0:26,0:25:7.99:0,8,126	0/0:18,0:20:1.88:0,2,66	1/1:11,13:23:55.35:699,55,0	1/1:9,7:21:1.44:181,1,0	1/1:9,9:21:50.24:612,50,0	1/1:2,6:12:5.75:67,6,0	1/1:3,7:14:20.54:194,21,0	1/1:5,11:25:48.72:490,49,0	1/1:2,8:15:14.84:153,15,0	1/1:7,16:32:15.55:127,16,0	1/1:4,7:26:24.70:371,25,0	1/1:5,1:7:2.19:141,2,0	1/1:2,4:7:2.52:112,3,0	0/1:15,0:15:1.13:1,0,65	0/0:9,0:8:1.71:0,2,4	0/0:13,0:12:4.67:0,5,28	1/1:5,4:18:2.75:24,3,0	1/1:3,8:19:8.62:89,9,0	1/1:7,2:11:6.01:68,6,0	0/1:25,0:24:9.09:9,0,113	1/1:6,10:23:41.88:627,42,0	1/1:3,9:25:47.06:492,47,0	1/1:1,4:6:17.08:195,17,0
chr10	9664114	.	CT	C	358.80	PASS	AB=0.878;AC=17;AF=0.304;AN=56;BaseQRankSum=4.186;DP=635;FS=0.524;HRun=3;HaplotypeScore=275.3430;InbreedingCoeff=-0.1734;MQ=49.85;MQ0=24;MQRankSum=-1.346;QD=0.99;ReadPosRankSum=3.443;VQSLOD=-0.4736;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:34:21.12:0,21,309	0/0:4,2:6:1.53:0,2,15	0/1:28,0:11:22.33:22,0,292	0/1:61,0:25:25.26:25,0,362	0/0:38,0:35:39.09:0,39,457	0/0:25,0:24:26.60:0,27,419	0/0:20,0:20:28.60:0,29,308	0/1:26,0:25:53.77:93,0,54	0/0:24,0:23:0.35:0,0,35	0/1:20,4:21:90.73:91,0,156	1/1:14,2:14:0.08:1,0,0	0/1:16,2:17:7.31:7,0,28	0/1:21,6:26:19.64:20,0,30	0/0:13,6:16:0.48:0,0,1	0/1:28,8:34:0.01:0,0,1	0/1:19,9:28:42.64:43,0,99	0/1:6,2:7:26.01:26,0,33	0/1:8,1:7:2.41:2,0,38	0/0:12,0:12:28.64:0,29,298	0/0:13,0:12:11.59:0,12,119	0/0:13,0:10:0.46:0,0,74	0/0:11,8:18:0.30:0,0,1	0/0:16,6:21:0.61:0,1,1	1/1:14,3:14:2.36:13,2,0	0/0:26,0:25:37.41:0,37,464	0/1:20,5:24:75.68:76,0,198	0/1:23,6:28:65.41:65,0,107	0/1:8,1:6:6.62:7,0,14
chr10	9664118	.	CT	C	1277.23	PASS	AB=0.874;AC=9;AF=0.161;AN=56;BaseQRankSum=4.108;DP=631;FS=8.167;HRun=1;HaplotypeScore=267.8851;InbreedingCoeff=-0.1020;MQ=44.15;MQ0=30;MQRankSum=-4.106;QD=6.79;ReadPosRankSum=-1.418;VQSLOD=-0.4622;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:32:11.17:0,11,260	0/0:7,0:7:11.76:0,12,108	0/0:24,0:10:21.84:0,22,322	0/0:56,0:20:18.91:0,19,307	0/0:35,0:32:30.10:0,30,402	0/0:25,0:24:29.87:0,30,485	0/0:19,0:19:28.65:0,29,361	0/0:25,1:25:19.04:0,19,428	0/0:25,0:24:15.45:0,15,169	0/1:22,2:21:99:170,0,318	0/1:15,3:15:0.24:0,0,0	0/1:14,4:17:5.20:56,0,5	0/1:25,2:26:99:104,0,182	0/0:17,2:16:5.95:0,6,45	0/0:32,4:34:2.55:0,3,16	0/1:22,7:29:50.12:291,0,50	0/1:8,0:7:41.79:104,0,42	0/1:9,1:8:7.72:8,0,65	0/0:9,0:9:17.49:0,17,230	0/0:13,0:11:10.38:0,10,119	0/0:17,0:11:0.57:0,1,95	0/0:16,4:19:0.97:0,1,4	0/0:19,3:21:3.76:0,4,16	0/0:15,3:15:2.62:0,3,31	0/0:26,0:25:37.50:0,37,496	0/1:22,4:25:99:246,0,244	0/1:19,9:27:41.14:425,0,41	0/0:8,2:6:14.75:0,15,116
chr10	9664125	.	T	TCC	1519.94	PASS	AB=0.963;AC=11;AF=0.196;AN=56;BaseQRankSum=-2.455;DP=602;FS=4.382;HRun=1;HaplotypeScore=255.5671;InbreedingCoeff=0.5837;MQ=34.07;MQ0=30;MQRankSum=-0.864;QD=8.40;ReadPosRankSum=-1.053;VQSLOD=-0.4300;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:26,8:30:37.08:463,37,0	0/0:8,0:8:14.51:0,15,88	0/0:18,0:8:14.02:0,14,143	0/0:45,0:15:22.33:0,22,218	0/1:28,4:29:26.83:132,0,27	1/1:22,6:27:15.04:409,15,0	1/1:18,4:22:17.16:254,17,0	0/0:22,0:21:42.25:0,42,310	0/1:22,0:21:2.91:3,0,62	0/0:23,0:20:47.81:0,48,374	0/1:18,0:15:0.10:1,0,0	0/0:17,0:16:10.71:0,11,59	0/0:23,0:23:13.04:0,13,198	0/0:18,0:15:2.94:0,3,18	0/0:34,0:32:0.84:0,1,3	0/0:29,0:29:35.84:0,36,221	0/0:8,0:7:17.65:0,18,125	0/0:9,0:7:14.78:0,15,97	0/0:9,0:9:9.65:0,10,152	0/0:13,0:11:9.98:0,10,78	0/0:18,0:12:7.44:0,7,55	0/0:21,0:20:8.60:0,9,53	0/0:21,0:20:1.92:0,2,17	0/0:20,0:16:2.34:0,2,24	1/1:19,6:24:40.83:414,41,0	0/0:25,0:24:64.28:0,64,451	0/0:25,0:24:44.40:0,44,326	0/0:13,0:8:19.46:0,19,115
chr10	9664149	.	TCTCTCC	T	5152.12	PASS	AB=1.000;AC=44;AF=0.786;AN=56;BaseQRankSum=2.459;DP=576;FS=16.150;HRun=0;HaplotypeScore=233.7058;InbreedingCoeff=0.1328;MQ=34.85;MQ0=36;MQRankSum=-3.519;QD=10.54;ReadPosRankSum=-1.060;VQSLOD=2.4949;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:38,0:34:70.93:71,0,263	1/1:7,0:7:11.15:76,11,0	0/0:39,0:5:14.71:0,15,101	0/0:48,0:8:20.64:0,21,135	0/1:24,0:23:42.58:43,0,237	0/1:30,0:29:99:164,0,184	0/1:19,0:19:57.61:167,0,58	1/1:20,0:20:52.44:444,52,0	0/1:17,0:16:15.01:15,0,38	1/1:18,0:16:26.71:518,27,0	1/1:14,0:12:9.64:38,10,0	1/1:16,0:16:28.80:211,29,0	1/1:20,1:21:39.87:436,40,0	1/1:18,1:18:18.72:86,19,0	1/1:24,1:24:21.70:104,22,0	1/1:34,3:37:70.37:574,70,0	1/1:8,0:8:20.91:255,21,0	1/1:9,0:8:6.54:55,7,0	1/1:10,0:10:8.98:210,9,0	0/1:12,0:11:0.65:28,0,1	0/1:17,0:9:6.49:77,0,6	1/1:20,1:19:21.92:107,22,0	1/1:19,1:20:5.13:18,5,0	1/1:20,1:18:2.47:11,2,0	0/1:15,0:15:40.83:41,0,184	1/1:19,0:19:39.09:571,39,0	1/1:19,2:20:49.50:702,49,0	1/1:11,0:7:20.48:131,20,0
chr10	9664151	.	TCTCC	T	4159.80	PASS	AB=1.000;AC=46;AF=0.821;AN=56;BaseQRankSum=2.583;DP=588;FS=27.604;HRun=0;HaplotypeScore=229.6809;InbreedingCoeff=0.1635;MQ=34.63;MQ0=36;MQRankSum=-2.028;QD=8.42;ReadPosRankSum=-1.849;VQSLOD=1.3670;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:38,0:34:70.89:71,0,114	1/1:6,1:7:10.36:52,10,0	0/0:41,0:5:14.71:0,15,101	0/0:52,0:10:26.62:0,27,179	0/1:25,0:24:42.64:43,0,118	0/1:30,0:29:62.47:183,0,62	1/1:19,0:19:2.12:183,2,0	1/1:22,0:22:62.73:512,63,0	0/1:17,0:16:20.78:32,0,21	1/1:14,4:16:36.27:395,36,0	1/1:13,2:13:9.45:38,9,0	1/1:14,2:16:13.86:160,14,0	1/1:15,5:20:39.54:304,40,0	1/1:14,5:18:16.49:80,16,0	1/1:19,6:24:22.48:105,22,0	1/1:32,5:37:48.54:402,49,0	1/1:6,2:8:17.86:160,18,0	1/1:8,1:8:3.16:37,3,0	1/1:12,0:12:32.39:254,32,0	0/1:12,0:11:4.96:28,0,5	1/1:15,1:9:7.53:85,8,0	1/1:15,6:20:24.60:117,25,0	1/1:15,4:19:3.03:10,3,0	1/1:20,1:18:2.76:11,3,0	0/1:15,0:15:48.46:48,0,68	1/1:14,4:19:2.50:312,2,0	1/1:18,4:21:28.48:433,28,0	1/1:10,1:7:16.64:104,17,0
chr10	9664153	.	TCC	T	4209.99	PASS	AB=0.969;AC=50;AF=0.893;AN=56;BaseQRankSum=2.810;DP=596;FS=3.024;HRun=2;HaplotypeScore=220.1397;InbreedingCoeff=0.5285;MQ=34.30;MQ0=40;MQRankSum=2.095;QD=8.70;ReadPosRankSum=0.474;VQSLOD=0.3452;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:37,0:33:18.15:112,18,0	1/1:6,1:7:8.61:47,9,0	0/0:50,0:5:14.71:0,15,101	0/0:62,0:10:26.62:0,27,179	0/1:24,0:23:7.24:54,0,7	1/1:28,0:28:29.22:230,29,0	1/1:17,1:18:35.81:214,36,0	1/1:23,0:23:65.82:542,66,0	0/1:14,0:14:1.21:32,0,1	1/1:17,0:16:42.01:327,42,0	1/1:15,0:13:9.72:38,10,0	1/1:16,0:16:26.64:164,27,0	1/1:20,0:20:39.04:233,39,0	1/1:18,0:18:16.49:80,16,0	1/1:22,1:23:22.85:105,23,0	1/1:34,1:36:60.85:379,61,0	1/1:8,0:8:15.95:134,16,0	1/1:9,0:8:3.51:38,4,0	1/1:13,0:13:38.34:283,38,0	1/1:12,0:11:8:40,8,0	1/1:15,0:8:14.83:108,15,0	1/1:21,0:20:24.60:117,25,0	1/1:20,0:21:3.33:10,3,0	1/1:20,0:18:2.61:12,3,0	1/1:15,0:15:17.75:120,18,0	1/1:18,0:19:39.43:323,39,0	1/1:22,0:21:52.59:369,53,0	1/1:10,0:7:14.44:98,14,0
chr10	9664154	.	CCT	C	438.93	PASS	AB=0.988;AC=20;AF=0.357;AN=56;BaseQRankSum=0.921;DP=590;FS=6.210;HRun=0;HaplotypeScore=228.5661;InbreedingCoeff=0.0077;MQ=34.87;MQ0=40;MQRankSum=-0.091;QD=1.51;ReadPosRankSum=3.635;VQSLOD=1.7378;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:34,0:31:26.37:37,0,26	0/0:7,0:7:3.64:0,4,18	0/0:50,0:5:15.04:0,15,202	0/0:62,0:10:27.08:0,27,362	0/0:21,0:21:11.69:0,12,81	0/1:26,0:26:19.26:19,0,45	0/1:17,0:18:0.12:0,0,16	1/1:23,0:23:7.67:27,8,0	0/0:11,0:11:3.70:0,4,27	1/1:15,1:15:2.35:96,2,0	0/0:15,0:13:0.31:0,0,0	0/1:16,0:16:10.15:29,0,10	0/1:20,1:21:29.96:46,0,30	0/0:18,0:18:0.34:0,0,73	0/0:25,0:25:18.19:0,18,95	0/1:34,1:35:15.63:16,0,48	1/1:8,0:8:0.28:31,0,0	0/0:9,0:8:3.64:0,4,18	1/1:13,0:13:10.76:57,11,0	0/0:13,0:12:14:0,14,68	0/1:15,0:8:9.53:10,0,10	0/0:22,0:20:2.71:0,3,28	0/0:22,0:22:3.56:0,4,18	0/0:23,0:20:3.72:0,4,16	0/1:14,0:14:32.04:37,0,32	0/1:18,1:19:5.83:88,0,6	0/1:22,0:21:34.64:77,0,35	1/1:9,1:7:2.41:17,2,0
chr10	9664167	.	TTGTGTGTG	T	6629.49	PASS	AB=0.669;AC=38;AF=0.704;AN=54;BaseQRankSum=-3.736;DP=682;FS=4.824;HRun=0;HaplotypeScore=237.1552;InbreedingCoeff=0.5448;MQ=39.32;MQ0=41;MQRankSum=-2.399;QD=13.99;ReadPosRankSum=3.371;VQSLOD=3.6832;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:21,0:39:11.30:22,0,11	1/1:4,7:11:8.94:205,9,0	./.	0/0:62,0:10:6.02:0,6,141	0/0:13,0:29:8.07:0,8,23	1/1:11,0:29:27.30:396,27,0	0/0:16,0:16:0.47:0,0,2	1/1:25,0:25:15.05:265,15,0	0/1:9,0:14:3.09:51,0,3	1/1:9,11:20:33.11:692,33,0	1/1:10,5:14:10.31:217,10,0	1/1:15,9:23:8.35:163,8,0	1/1:15,9:24:26.64:542,27,0	1/1:11,15:26:22.70:508,23,0	1/1:18,15:33:15.68:345,16,0	1/1:18,16:34:48.88:1120,49,0	1/1:5,6:12:6.46:204,6,0	1/1:6,4:9:6.02:143,6,0	0/0:14,0:15:18.06:0,18,523	0/0:11,0:14:17.58:0,18,332	0/0:14,0:13:20.60:0,21,565	1/1:16,11:25:9.56:262,10,0	0/1:10,0:25:7.25:30,0,7	1/1:14,8:21:8.02:153,8,0	0/1:10,0:18:6.33:6,0,8	1/1:10,13:22:33.05:619,33,0	1/1:19,6:25:23.22:499,23,0	1/1:5,2:7:9.03:188,9,0
chr10	9664184	.	TG	T	678.89	PASS	AB=0.986;AC=9;AF=0.161;AN=56;BaseQRankSum=6.926;DP=606;FS=0.000;HRun=1;HaplotypeScore=177.4107;InbreedingCoeff=0.6520;MQ=40.03;MQ0=41;MQRankSum=-4.403;QD=5.70;ReadPosRankSum=5.765;VQSLOD=0.4175;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:33,1:30:18.01:204,18,0	0/0:13,0:13:12.64:0,13,131	0/0:38,0:3:9.03:0,9,113	0/0:49,0:9:24.08:0,24,304	0/1:25,0:25:5.41:165,0,5	0/1:21,1:21:1.43:191,0,1	1/1:10,7:14:9.80:102,10,0	0/0:24,0:24:68.24:0,68,872	0/0:13,0:12:9.82:0,10,153	0/0:18,0:18:26.60:0,27,334	0/0:15,0:14:18.16:0,18,173	0/0:23,0:22:21.65:0,22,273	0/0:22,0:21:24.90:0,25,331	0/0:27,0:27:28.15:0,28,288	0/0:30,0:30:24.36:0,24,199	0/0:31,0:31:23.10:0,23,229	0/0:10,0:10:8.87:0,9,150	0/0:8,0:7:7.60:0,8,81	0/0:12,0:11:33.10:0,33,417	0/0:17,0:16:22.76:0,23,290	0/0:20,0:16:25.80:0,26,303	0/0:23,0:22:21.28:0,21,186	0/0:24,0:23:25.90:0,26,333	0/0:22,0:20:7.48:0,7,53	1/1:14,1:12:12:160,12,0	0/0:22,0:21:37.22:0,37,508	0/0:26,0:24:27.03:0,27,385	0/1:6,0:5:0.70:1,0,32
chr10	9668360	.	T	TC	1629.88	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.133;DP=549;FS=14.253;HRun=1;HaplotypeScore=66.1851;InbreedingCoeff=0.9780;MQ=87.11;MQ0=0;MQRankSum=-2.456;QD=33.26;ReadPosRankSum=-3.091;VQSLOD=1.4526;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:51.14:0,51,633	0/0:8,0:8:21.06:0,21,258	0/0:20,0:20:39.19:0,39,528	0/0:20,0:19:39.43:0,39,505	0/0:19,0:19:45.13:0,45,570	0/0:19,0:19:51.15:0,51,638	0/0:21,0:21:60.19:0,60,767	0/0:37,0:37:99:0,102,1280	0/0:18,0:18:54.17:0,54,689	0/0:20,0:20:51.16:0,51,652	0/0:16,0:16:45.15:0,45,583	0/0:21,0:21:63.15:0,63,772	0/0:26,0:26:78.23:0,78,983	0/0:28,0:28:84.22:0,84,1035	0/0:24,0:24:72.23:0,72,935	0/0:29,0:29:87.27:0,87,1114	0/0:15,0:15:45.08:0,45,548	0/0:17,0:17:51.13:0,51,642	1/1:1,14:15:42.05:522,42,0	1/1:1,15:16:42.14:622,42,0	1/1:3,15:18:42.14:628,42,0	0/0:17,0:17:42.12:0,42,508	0/0:15,0:15:39.13:0,39,506	0/0:18,0:17:54.13:0,54,656	0/0:20,0:20:51.13:0,51,643	0/0:20,0:20:51.16:0,51,652	0/0:29,0:28:87.26:0,87,1107	0/0:3,0:3:9.03:0,9,117
chr10	9668677	.	AG	A	1513.75	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=7.673;DP=643;FS=1.126;HRun=6;HaplotypeScore=61.2818;InbreedingCoeff=0.9954;MQ=90.74;MQ0=0;MQRankSum=-1.592;QD=24.03;ReadPosRankSum=0.983;VQSLOD=3.1577;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,108,1318	0/0:7,0:7:21.07:0,21,276	0/0:31,0:31:68.57:0,69,847	0/0:32,0:32:81.18:0,81,960	0/0:27,0:27:72.23:0,72,947	0/0:14,0:14:39.13:0,39,512	0/0:12,0:12:30.08:0,30,380	0/0:30,0:30:84.23:0,84,1036	0/0:25,0:25:75.22:0,75,958	0/0:12,0:12:33.11:0,33,434	0/0:17,0:17:48.15:0,48,619	0/0:26,0:26:75.23:0,75,969	0/0:30,0:30:84.26:0,84,1089	0/0:27,0:27:78.23:0,78,995	0/0:20,0:20:51.16:0,51,658	0/0:32,0:32:84.25:0,84,1078	0/0:23,0:23:66.19:0,66,839	0/0:6,0:6:18.06:0,18,237	1/1:3,14:17:42.09:443,42,0	1/1:2,17:19:48.09:504,48,0	1/1:1,26:27:66.17:709,66,0	0/0:20,0:20:57.17:0,57,732	0/0:25,0:25:69.21:0,69,890	0/0:24,0:24:63.20:0,63,828	0/0:24,0:24:72.23:0,72,930	0/0:29,0:29:87.28:0,87,1142	0/0:28,0:28:78.23:0,78,990	0/0:18,0:18:51.17:0,51,667
chr10	9669556	.	T	TAACCG	4457.56	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-7.642;DP=723;FS=12.139;HRun=0;HaplotypeScore=132.5711;InbreedingCoeff=0.9976;MQ=78.83;MQ0=0;MQRankSum=-2.019;QD=75.55;ReadPosRankSum=0.309;VQSLOD=6.0468;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,129,2794	0/0:12,0:12:36.12:0,36,803	0/0:22,0:22:18.97:0,19,1108	0/0:22,0:22:38.35:0,38,1107	0/0:33,0:33:99:0,99,2207	0/0:29,0:29:83.96:0,84,1869	0/0:22,0:22:63.20:0,63,1362	0/0:29,0:29:78.27:0,78,1703	0/0:21,0:21:63.20:0,63,1360	0/0:39,0:39:99:0,111,2401	0/0:16,0:16:48.15:0,48,1027	0/0:33,0:33:96.32:0,96,2094	0/0:32,0:32:96.33:0,96,2140	0/0:28,0:28:84.29:0,84,1850	0/0:30,0:30:87.30:0,87,1940	0/0:26,0:25:75.24:0,75,1630	0/0:19,0:19:57.20:0,57,1235	0/0:21,0:21:63.19:0,63,1343	1/1:5,12:18:48.16:1416,48,0	1/1:4,17:23:60.16:1709,60,0	1/1:4,12:18:42.14:1333,42,0	0/0:23,0:23:69.24:0,69,1505	0/0:30,0:30:90.31:0,90,2007	0/0:23,0:23:69.22:0,69,1496	0/0:47,0:47:99:0,138,3075	0/0:15,0:15:45.15:0,45,961	0/0:34,0:34:96.33:0,96,2113	0/0:14,0:14:41.84:0,42,794
chr10	9671759	.	CTG	C	296.24	PASS	AB=0.975;AC=18;AF=0.321;AN=56;BaseQRankSum=8.747;DP=673;FS=10.084;HRun=0;HaplotypeScore=220.3056;InbreedingCoeff=0.0765;MQ=42.35;MQ0=16;MQRankSum=-7.158;QD=0.85;ReadPosRankSum=5.067;VQSLOD=1.2677;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:10,1:11:5.06:0,5,65	0/0:9,0:8:1.59:0,2,44	0/0:27,0:18:49.02:0,49,668	0/0:34,1:22:48.65:0,49,723	0/0:20,7:25:5.98:0,6,126	0/1:20,2:22:72.85:73,0,77	0/1:9,2:11:16.47:32,0,16	0/1:58,1:52:80.19:80,0,595	1/1:29,0:25:17.97:82,18,0	0/1:33,0:27:40.57:41,0,207	0/0:27,0:24:5.99:0,6,91	0/0:22,0:20:8.23:0,8,106	0/1:22,0:21:2.81:3,0,75	0/0:22,0:22:6.61:0,7,48	1/1:29,0:26:5.20:17,5,0	0/1:32,0:31:18.75:19,0,54	0/1:22,0:21:10.68:11,0,14	1/1:11,0:9:1.66:7,2,0	0/0:24,0:22:66.20:0,66,1195	0/0:30,0:30:90.24:0,90,1568	0/0:30,0:30:81.23:0,81,1455	0/0:28,0:27:16.67:0,17,217	0/0:19,0:18:7.25:0,7,76	0/1:15,0:14:0:0,0,0	0/0:14,1:15:7.62:0,8,52	0/1:28,0:26:31.79:32,0,173	0/1:31,0:30:34.14:34,0,47	1/1:3,0:3:5.49:22,5,0
chr10	9671765	.	CTG	C	3219.64	PASS	AB=0.725;AC=33;AF=0.589;AN=56;BaseQRankSum=3.875;DP=647;FS=14.156;HRun=0;HaplotypeScore=211.3106;InbreedingCoeff=0.2197;MQ=46.48;MQ0=15;MQRankSum=-1.684;QD=6.92;ReadPosRankSum=0.574;VQSLOD=1.8115;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,5:8:1.22:42,1,0	1/1:3,5:7:3.03:34,3,0	0/0:26,0:19:35.69:0,36,694	0/0:38,1:24:30.90:0,31,610	1/1:20,6:24:17.50:131,17,0	1/1:21,1:22:16.87:119,17,0	1/1:5,6:10:5.41:88,5,0	0/1:45,11:49:99:527,0,403	1/1:13,16:25:21.53:195,22,0	0/1:29,2:25:85.01:533,0,85	0/1:22,7:26:0.03:0,0,0	0/1:7,11:16:8.15:45,0,8	0/1:10,13:22:27.58:79,0,28	0/0:19,1:20:0.04:0,1,0	1/1:7,21:25:6.32:87,6,0	0/1:10,22:31:0.53:395,0,1	0/1:3,16:18:4.26:78,0,4	1/1:2,8:8:6.02:91,6,0	0/0:25,0:23:66.21:0,66,1204	0/0:28,0:28:83.30:0,83,1525	0/0:29,0:29:81.19:0,81,1374	1/1:28,0:27:16.57:121,17,0	1/1:12,3:14:2.52:45,3,0	0/0:14,0:13:0:0,0,0	1/1:13,2:15:1.27:46,1,0	0/1:24,1:24:91.10:355,0,91	0/1:9,20:28:29.49:279,0,29	1/1:2,1:3:6.49:91,6,0
chr10	9671767	.	GTC	G	2053.61	PASS	AB=0.889;AC=37;AF=0.661;AN=56;BaseQRankSum=9.258;DP=647;FS=14.876;HRun=0;HaplotypeScore=215.9041;InbreedingCoeff=0.4375;MQ=48.35;MQ0=15;MQRankSum=-5.751;QD=4.46;ReadPosRankSum=2.321;VQSLOD=1.7831;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,2:9:1.21:23,1,0	1/1:7,1:7:3.43:23,3,0	0/0:27,0:20:50.72:0,51,736	0/0:41,0:26:33.59:0,34,599	1/1:18,7:23:2.60:13,3,0	1/1:17,2:19:3.79:20,4,0	1/1:8,3:10:7.53:50,8,0	0/1:47,9:49:99:463,0,162	1/1:27,3:25:27.30:132,27,0	1/1:29,2:25:30.98:363,31,0	0/1:22,5:24:0.03:0,0,0	1/1:14,4:16:5.21:48,5,0	1/1:17,6:22:16.18:94,16,0	0/0:16,5:21:0.04:0,1,0	1/1:24,4:25:6.30:51,6,0	1/1:28,4:31:33.52:250,34,0	0/1:17,2:18:5.87:44,0,6	1/1:10,0:8:5.98:48,6,0	0/0:25,0:23:69.21:0,69,1143	0/0:28,0:28:81.24:0,81,1369	0/0:29,0:29:75.24:0,75,1257	1/1:26,2:27:3.44:23,3,0	1/1:14,1:14:2.49:20,2,0	0/0:13,1:13:0:0,0,0	0/1:12,3:15:0.66:15,0,1	1/1:23,2:24:24.84:254,25,0	1/1:26,2:27:28.59:237,29,0	0/1:3,0:3:13.89:44,0,14
chr10	9671769	.	C	CTCTG	4440.79	PASS	AB=0.991;AC=37;AF=0.661;AN=56;BaseQRankSum=7.629;DP=652;FS=17.038;HRun=0;HaplotypeScore=227.0448;InbreedingCoeff=0.3195;MQ=48.87;MQ0=15;MQRankSum=-5.703;QD=9.19;ReadPosRankSum=0.971;VQSLOD=2.8980;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:10,0:10:3.01:40,3,0	0/1:7,0:6:12.09:19,0,12	0/0:29,0:20:50.77:0,51,738	0/0:45,0:28:37.94:0,38,607	1/1:23,0:21:2.82:27,3,0	1/1:8,11:19:1.01:20,1,0	1/1:12,0:11:9.35:114,9,0	0/1:54,1:48:99:743,0,182	1/1:27,2:25:28.12:267,28,0	1/1:14,17:25:25.12:714,25,0	0/1:27,0:24:0.07:0,0,0	0/1:21,0:19:7.14:96,0,7	0/1:22,1:22:0.14:248,0,0	1/1:9,11:21:0.36:1,0,0	1/1:28,0:25:1.26:116,1,0	1/1:32,1:32:36.20:506,36,0	1/1:19,0:18:1.51:98,2,0	0/1:11,0:9:14.83:71,0,15	0/0:25,0:23:69.21:0,69,1205	0/0:28,0:28:81.24:0,81,1414	0/0:29,0:28:78.25:0,78,1355	1/1:13,14:26:9.33:193,9,0	1/1:6,7:14:2.98:21,3,0	0/0:3,10:12:0:0,0,0	1/1:7,9:15:7.23:105,7,0	1/1:14,11:24:26.13:577,26,0	1/1:28,0:27:21.93:365,22,0	0/1:3,0:3:13.87:101,0,14
chr10	9671775	.	GTC	G	1497.11	PASS	AB=0.802;AC=17;AF=0.304;AN=56;BaseQRankSum=5.413;DP=636;FS=7.738;HRun=0;HaplotypeScore=230.2191;InbreedingCoeff=0.0521;MQ=53.65;MQ0=16;MQRankSum=-6.014;QD=4.78;ReadPosRankSum=1.199;VQSLOD=2.0546;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:11,1:12:3.89:0,4,13	1/1:7,1:6:1:35,1,0	0/0:33,1:22:47.83:0,48,836	0/0:52,0:31:5.73:0,6,555	1/1:14,8:20:2.86:29,3,0	1/1:13,2:15:5.71:77,6,0	0/1:10,2:11:6.42:20,0,6	0/1:35,15:43:99:501,0,131	0/1:25,4:26:20.82:21,0,75	0/1:20,8:22:79.96:232,0,80	0/1:14,12:23:0.03:0,0,0	1/1:19,3:20:0.99:43,1,0	0/1:20,3:22:49.03:133,0,49	0/0:18,1:19:0.04:0,1,0	0/0:25,3:25:3.73:0,4,10	0/1:23,5:27:59.50:107,0,60	0/0:15,0:14:2.60:0,3,10	0/0:8,2:8:5.68:0,6,41	0/0:27,0:25:66.21:0,66,1071	0/0:29,0:29:75.18:0,75,1204	0/0:28,0:27:69.24:0,69,1154	0/0:15,8:22:6.01:0,6,72	0/0:13,2:14:0:0,0,0	0/0:11,1:12:0:0,0,0	0/0:15,1:15:6.06:0,6,51	0/1:14,10:23:43.92:236,0,44	0/1:20,6:25:8.07:202,0,8	0/0:2,0:2:1.72:0,2,10
chr10	9671816	.	T	TGC	649.25	PASS	AB=0.856;AC=10;AF=0.185;AN=54;BaseQRankSum=0.891;DP=488;FS=8.160;HRun=0;HaplotypeScore=188.0132;InbreedingCoeff=-0.0530;MQ=43.74;MQ0=32;MQRankSum=-1.314;QD=3.82;ReadPosRankSum=0.245;VQSLOD=1.9084;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:12:3.47:0,3,26	0/0:6,2:5:2.92:0,3,28	0/1:17,0:8:9.52:10,0,103	0/0:30,0:11:3.84:0,4,212	0/0:17,0:15:4.40:0,4,12	0/0:8,0:8:2.75:0,3,35	0/0:12,0:7:5.11:0,5,28	0/1:23,0:20:33.85:34,0,392	0/0:16,0:14:16.65:0,17,156	0/1:15,9:20:99:362,0,305	0/0:15,2:12:2.54:0,3,11	0/0:20,3:19:10.45:0,10,62	0/0:14,1:13:9.84:0,10,68	0/0:15,4:17:6.35:0,6,41	0/0:18,4:19:2.30:0,2,29	0/1:22,8:29:54.90:55,0,163	0/1:6,2:5:27.47:81,0,27	0/1:8,1:8:27.63:74,0,28	0/0:20,0:16:44.92:0,45,610	0/0:19,0:19:35.40:0,35,540	0/0:27,0:23:51.15:0,51,726	1/1:17,7:22:4.34:14,4,0	0/0:6,3:6:0:0,0,0	./.	0/1:18,0:13:0.02:1,0,0	0/1:10,5:13:99:146,0,210	0/0:19,2:18:20.37:0,20,226	0/0:7,0:4:12.02:0,12,136
chr10	9671825	.	C	CTG	236.75	PASS	AB=0.987;AC=19;AF=0.352;AN=54;BaseQRankSum=1.987;DP=467;FS=0.728;HRun=0;HaplotypeScore=181.1898;InbreedingCoeff=0.0113;MQ=32.65;MQ0=36;MQRankSum=-0.616;QD=0.83;ReadPosRankSum=-0.686;VQSLOD=2.7288;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:9:3.47:0,3,12	0/0:8,0:5:2.74:0,3,12	1/1:8,0:4:3.63:10,4,0	0/0:15,0:3:8.99:0,9,76	0/0:12,0:10:1.42:0,1,4	0/0:6,0:6:1.99:0,2,18	0/0:10,0:5:2.25:0,2,11	0/1:27,0:23:74.34:74,0,87	0/1:17,0:13:10.87:11,0,28	0/0:28,0:23:7.20:0,7,180	1/1:22,0:16:2.46:16,2,0	0/1:26,0:21:13.30:21,0,13	0/1:16,0:13:14.64:37,0,15	0/1:18,0:15:3.40:24,0,3	0/1:19,1:14:0:1,0,0	0/1:27,3:29:27.18:126,0,27	0/1:12,0:8:13.81:19,0,14	0/1:10,0:7:6.24:6,0,27	0/0:19,0:14:37.09:0,37,295	0/0:15,0:15:17.26:0,17,148	0/0:25,0:20:41.44:0,41,337	1/1:22,0:20:0.94:1,1,0	0/1:12,0:8:0.01:0,0,0	./.	1/1:19,0:14:2.22:8,2,0	0/0:16,0:13:24.18:0,24,150	0/1:25,0:22:15.82:16,0,66	0/0:7,0:4:8.61:0,9,51
chr10	9671840	.	T	TGC	132.70	PASS	AB=0.996;AC=14;AF=0.269;AN=52;BaseQRankSum=3.996;DP=403;FS=13.820;HRun=0;HaplotypeScore=153.6799;InbreedingCoeff=-0.0038;MQ=26.96;MQ0=28;MQRankSum=-0.783;QD=0.67;ReadPosRankSum=0.482;VQSLOD=2.1148;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:7:1.72:0,2,4	0/0:6,0:3:2.88:0,3,20	0/0:5,0:1:3.01:0,3,46	./.	0/0:9,0:7:0.47:0,0,1	0/0:3,1:4:2.94:0,3,18	1/1:8,0:4:3:26,3,0	0/0:33,0:28:44.53:0,45,407	0/1:10,0:6:54.13:54,0,60	0/1:29,0:22:63.63:64,0,178	0/1:22,0:18:0.05:0,0,1	0/1:23,1:19:15.31:15,0,68	0/0:17,0:14:2.37:0,2,175	0/0:19,0:16:3.45:0,3,40	0/0:22,0:16:2.54:0,3,34	0/1:27,0:26:33.88:34,0,133	0/1:12,0:8:4.21:4,0,96	0/1:8,0:5:6.27:6,0,80	0/0:16,0:14:40.92:0,41,531	0/0:8,0:8:2.43:0,2,46	0/0:21,0:17:33.01:0,33,417	1/1:19,0:17:2.09:4,2,0	0/1:13,0:10:0:0,0,0	./.	0/1:16,0:12:0.05:1,0,0	0/1:10,0:8:36.24:42,0,36	0/0:16,2:15:21.17:0,21,232	0/0:6,0:3:9.03:0,9,116
chr10	9674915	.	A	AG	20791.27	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-14.011;DP=679;FS=12.009;HRun=2;HaplotypeScore=62.7018;InbreedingCoeff=0.9759;MQ=95.52;MQ0=0;MQRankSum=-8.339;QD=38.79;ReadPosRankSum=4.421;VQSLOD=4.4584;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,45:46:99:1858,129,0	1/1:0,13:13:33.11:475,33,0	0/0:35,0:35:93.26:0,93,1134	0/0:31,0:31:89.08:0,89,1066	1/1:2,14:16:42.10:582,42,0	1/1:0,19:19:54.18:777,54,0	1/1:1,19:20:51.17:735,51,0	1/1:1,27:28:78.24:1098,78,0	1/1:1,26:27:75.21:1057,75,0	1/1:1,22:23:66.21:931,66,0	1/1:0,23:23:69.23:994,69,0	1/1:1,20:21:57.19:821,57,0	1/1:2,23:25:60.20:864,60,0	1/1:0,23:23:63.21:907,63,0	1/1:0,31:31:87.29:1253,87,0	1/1:1,22:23:57.19:821,57,0	1/1:1,27:28:81.27:1166,81,0	1/1:0,15:15:42.14:605,42,0	0/0:20,0:20:60.16:0,60,719	0/0:22,0:22:60.19:0,60,743	0/0:34,1:35:59.08:0,59,1169	1/1:1,21:23:63.21:901,63,0	1/1:2,20:22:57.19:821,57,0	1/1:6,32:38:90.30:1296,90,0	1/1:0,28:28:75.25:1080,75,0	1/1:1,20:21:57.17:801,57,0	1/1:0,20:20:60.20:862,60,0	1/1:0,2:2:6.02:86,6,0
chr10	9676066	.	A	AC	22045.54	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-9.143;DP=642;FS=5.712;HRun=2;HaplotypeScore=55.5650;InbreedingCoeff=0.9955;MQ=91.75;MQ0=0;MQRankSum=-10.901;QD=37.24;ReadPosRankSum=5.562;VQSLOD=5.0609;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,37:39:96.32:1382,96,0	1/1:1,10:11:33.11:466,33,0	0/0:24,0:24:60.15:0,60,727	0/0:26,0:26:69.16:0,69,814	1/1:1,21:22:57.19:820,57,0	1/1:2,11:13:33.11:475,33,0	1/1:0,20:20:54.18:777,54,0	1/1:3,21:23:63.20:882,63,0	1/1:1,23:24:60.20:864,60,0	1/1:0,34:34:99:1430,102,0	1/1:0,14:14:36.12:518,36,0	1/1:1,19:20:48.16:691,48,0	1/1:2,26:28:66.22:946,66,0	1/1:0,17:17:45.15:648,45,0	1/1:1,24:25:66.22:950,66,0	1/1:0,19:18:45.15:648,45,0	1/1:0,30:30:87.29:1253,87,0	1/1:0,21:21:48.16:691,48,0	1/1:2,18:20:54.14:737,54,0	1/1:0,26:26:60.16:840,60,0	1/1:0,38:37:99:1512,105,0	1/1:2,22:24:57.19:818,57,0	1/1:0,24:24:66.16:949,66,0	1/1:3,17:20:48.16:691,48,0	1/1:0,23:23:57.19:821,57,0	1/1:1,30:31:90.30:1285,90,0	1/1:1,18:19:48.16:691,48,0	1/1:0,6:6:18.06:259,18,0
chr10	9676242	.	CAGA	C	4955.24	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=11.435;DP=740;FS=9.048;HRun=0;HaplotypeScore=106.4121;InbreedingCoeff=0.9759;MQ=94.68;MQ0=0;MQRankSum=-4.439;QD=35.91;ReadPosRankSum=2.758;VQSLOD=5.7172;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,35:38:78.26:1329,78,0	0/0:13,0:13:39.13:0,39,892	0/0:36,0:36:99:0,105,2257	0/0:33,0:33:80.94:0,81,1639	1/1:1,32:33:57.20:972,57,0	1/1:0,27:27:69.24:1174,69,0	1/1:1,24:25:57.20:969,57,0	0/0:38,0:38:99:0,111,2556	0/0:35,0:35:99:0,105,2356	0/0:34,0:34:99:0,99,2237	0/0:15,0:15:42.14:0,42,968	0/0:21,0:21:63.22:0,63,1428	0/0:40,0:40:99:0,117,2647	0/0:21,0:21:63.22:0,63,1449	0/0:31,0:31:93.31:0,93,2064	0/0:29,0:29:87.30:0,87,1987	0/0:23,0:23:69.24:0,69,1591	0/0:12,0:12:36.12:0,36,823	0/0:22,0:22:57.20:0,57,1309	0/0:25,0:25:75.26:0,75,1727	0/0:28,0:28:84.29:0,84,1918	0/0:27,0:27:78.27:0,78,1781	0/0:29,0:29:84.29:0,84,1898	0/0:18,0:18:54.19:0,54,1243	1/1:1,14:15:30.10:512,30,0	0/0:39,0:39:99:0,114,2626	0/0:31,0:30:90.31:0,90,2061	0/0:2,0:2:6.02:0,6,138
chr10	9677135	.	T	TAC	16885.62	PASS	AB=0.728;AC=35;AF=0.625;AN=56;BaseQRankSum=15.417;DP=863;FS=5.434;HRun=0;HaplotypeScore=151.7397;InbreedingCoeff=0.7763;MQ=65.17;MQ0=4;MQRankSum=-0.174;QD=31.21;ReadPosRankSum=4.509;VQSLOD=6.4208;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,131,1675	0/1:2,8:11:19.87:230,0,20	0/1:32,0:21:19.38:19,0,298	0/0:33,0:20:14.87:0,15,290	0/0:30,0:30:66.19:0,66,798	0/0:26,0:26:69.19:0,69,835	0/0:38,0:38:90.27:0,90,1109	1/1:9,18:27:51.16:813,51,0	1/1:4,23:28:63.22:1040,63,0	1/1:9,31:40:44.77:1421,45,0	1/1:3,22:25:54.18:890,54,0	1/1:6,28:34:78.27:1272,78,0	1/1:4,25:30:57.19:941,57,0	1/1:8,29:37:72.25:1188,72,0	1/1:4,33:37:81.28:1336,81,0	1/1:7,32:39:78.27:1287,78,0	1/1:6,26:32:66.23:1089,66,0	1/1:3,21:24:26.12:721,26,0	0/0:23,0:22:54.15:0,54,648	0/0:21,0:21:51.16:0,51,637	0/0:69,0:68:99:0,159,1942	0/1:8,11:19:10.43:369,0,10	1/1:4,18:22:48.05:792,48,0	1/1:5,22:27:48.16:791,48,0	0/0:27,0:27:72.21:0,72,884	1/1:7,18:25:54.18:892,54,0	1/1:8,27:34:31.71:1052,32,0	1/1:0,16:15:45.15:743,45,0
chr10	9677464	.	A	AGTGTGT	9695.08	PASS	AB=1.000;AC=49;AF=0.875;AN=56;BaseQRankSum=-2.222;DP=706;FS=0.000;HRun=0;HaplotypeScore=200.9881;InbreedingCoeff=0.4315;MQ=62.09;MQ0=2;MQRankSum=0.201;QD=15.22;ReadPosRankSum=2.615;VQSLOD=3.7754;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:32,0:30:2.96:24,3,0	1/1:7,3:12:11.56:315,12,0	0/0:27,0:19:6.01:0,6,76	0/0:23,0:15:1.83:0,2,45	0/0:18,0:16:0:0,0,0	0/1:12,0:11:0:0,0,0	1/1:32,0:31:15:290,15,0	1/1:21,0:21:12.04:276,12,0	1/1:32,0:32:14.92:280,15,0	1/1:20,1:31:33.98:753,34,0	1/1:10,1:15:8.19:230,8,0	1/1:17,13:35:29.91:889,30,0	1/1:26,14:43:40.38:1164,40,0	1/1:23,3:33:15.51:421,16,0	1/1:23,9:38:39.05:1129,39,0	1/1:21,11:34:24.04:597,24,0	1/1:18,0:27:9.53:121,10,0	1/1:8,5:12:3.01:97,3,0	1/1:18,0:17:8.05:151,8,0	1/1:18,0:18:4.59:125,5,0	1/1:35,0:35:2.90:78,3,0	1/1:8,4:14:4.73:192,5,0	1/1:12,0:15:2.93:78,3,0	1/1:19,3:31:15.02:309,15,0	1/1:31,0:30:9.03:190,9,0	1/1:29,1:30:47.15:1003,47,0	1/1:19,4:24:27.05:711,27,0	1/1:6,2:10:11.50:270,11,0
chr10	9678068	.	TG	T	10645.15	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=6.134;DP=642;FS=1.749;HRun=6;HaplotypeScore=71.1084;InbreedingCoeff=0.9833;MQ=87.35;MQ0=0;MQRankSum=-4.149;QD=27.72;ReadPosRankSum=3.408;VQSLOD=5.5885;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,111,1445	1/1:0,7:7:18.05:193,18,0	0/0:25,0:25:63.13:0,63,812	0/0:27,0:27:75.02:0,75,880	0/0:12,0:12:33.09:0,33,419	0/0:27,0:27:78.25:0,78,1018	0/0:26,0:26:69.19:0,69,876	1/1:2,23:25:66.15:701,66,0	1/1:0,26:26:66.17:709,66,0	1/1:2,23:25:69.16:733,69,0	1/1:1,15:16:42.11:451,42,0	1/1:2,19:21:54.14:580,54,0	1/1:0,23:23:63.16:677,63,0	1/1:1,20:21:57.14:613,57,0	1/1:1,32:33:84.21:903,84,0	1/1:1,19:20:48.12:516,48,0	1/1:1,40:41:99:1161,108,0	1/1:1,17:18:51.13:548,51,0	0/0:18,0:18:51.17:0,51,671	0/0:19,0:19:48.13:0,48,601	0/0:42,0:42:99:0,120,1565	1/1:1,22:23:57.14:612,57,0	1/1:0,20:20:48.05:516,48,0	1/1:0,22:22:51.13:548,51,0	0/0:22,0:22:60.11:0,60,751	1/1:2,21:23:60.13:636,60,0	1/1:2,16:18:45.11:484,45,0	1/1:0,2:2:6.02:64,6,0
chr10	9678467	.	CATGTGTGTGTGT	C	5533.05	PASS	AB=0.519;AC=32;AF=0.571;AN=56;BaseQRankSum=4.420;DP=742;FS=7.571;HRun=0;HaplotypeScore=198.6214;InbreedingCoeff=0.7127;MQ=52.28;MQ0=28;MQRankSum=-5.420;QD=13.73;ReadPosRankSum=-0.615;VQSLOD=2.7264;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:42:75.96:0,76,1375	1/1:0,12:13:15.05:572,15,0	0/0:34,0:8:21.36:0,21,164	0/0:56,0:15:34.96:0,35,328	0/0:21,0:21:48.50:0,49,809	0/0:22,0:22:48.98:0,49,1089	0/0:31,0:31:48.02:0,48,642	1/1:31,0:28:74.95:532,75,0	1/1:1,0:22:11.87:341,12,0	1/1:0,21:21:51.59:430,52,0	0/1:0,21:21:0.26:1,0,0	1/1:4,17:20:2.13:112,2,0	1/1:1,19:19:6.91:223,7,0	1/1:4,32:38:11.16:357,11,0	1/1:1,21:24:7.27:175,7,0	1/1:3,19:21:5.07:622,5,0	0/0:0,18:18:0:0,0,0	0/1:4,24:26:99:322,0,100	0/0:23,0:22:62.95:0,63,679	0/0:22,0:21:44.63:0,45,911	0/0:47,0:47:89.78:0,90,1339	1/1:2,24:27:3.98:10,4,0	1/1:1,25:27:3.84:99,4,0	1/1:2,28:30:0.47:1,0,0	0/0:17,0:16:11.73:0,12,125	1/1:25,6:30:88.38:1147,88,0	1/1:0,13:13:8.95:249,9,0	1/1:1,11:11:9.03:341,9,0
chr10	9678468	.	ATGTG	A	2149.89	PASS	AB=0.885;AC=45;AF=0.865;AN=52;BaseQRankSum=0.789;DP=734;FS=0.000;HRun=0;HaplotypeScore=160.1319;InbreedingCoeff=0.2472;MQ=52.16;MQ0=28;MQRankSum=-1.268;QD=3.48;ReadPosRankSum=2.564;VQSLOD=2.5296;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:45,2:43:8.55:138,9,0	1/1:13,0:13:15.02:139,15,0	0/0:35,0:8:0:0,0,0	./.	1/1:19,1:20:5.85:86,6,0	1/1:12,10:22:21.06:327,21,0	0/1:21,8:30:0.49:109,0,0	./.	1/1:22,0:22:11.22:87,11,0	1/1:21,0:21:5.62:49,6,0	0/1:21,0:21:0.11:0,0,0	1/1:21,0:20:2.97:27,3,0	1/1:20,0:19:6.88:54,7,0	1/1:39,0:38:11.66:130,12,0	1/1:24,0:24:6.01:57,6,0	1/1:22,0:21:0.07:153,0,0	0/1:18,0:18:0:0,0,0	1/1:28,0:26:9.01:97,9,0	1/1:21,0:22:3:28,3,0	1/1:14,7:21:4.68:177,5,0	1/1:35,10:46:17.08:221,17,0	1/1:27,0:27:0.67:2,1,0	1/1:27,0:27:2.52:28,3,0	0/1:31,0:30:0.16:0,0,0	0/1:8,1:16:0.21:0,0,0	1/1:31,0:30:18.02:168,18,0	1/1:13,0:13:6.01:55,6,0	1/1:12,0:11:9.02:93,9,0
chr10	9682675	.	CCACA	C	3786.49	PASS	AB=1.000;AC=31;AF=0.554;AN=56;BaseQRankSum=7.539;DP=787;FS=5.154;HRun=0;HaplotypeScore=206.6839;InbreedingCoeff=-0.2208;MQ=56.20;MQ0=16;MQRankSum=-6.570;QD=6.30;ReadPosRankSum=-0.622;VQSLOD=2.3073;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:46,0:46:45.30:45,0,71	1/1:5,0:5:4.34:27,4,0	0/0:60,0:37:4.06:0,4,49	0/0:81,0:35:8.80:0,9,99	0/1:20,0:20:33.76:45,0,34	0/1:16,0:15:4.38:122,0,4	0/1:31,0:31:27.88:90,0,28	0/0:24,0:24:25.71:0,26,200	0/0:19,0:19:9.04:0,9,84	0/1:31,0:31:99:217,0,125	0/1:15,0:15:1.39:1,0,38	1/1:16,0:16:9.52:55,10,0	1/1:29,0:29:14.84:231,15,0	0/1:27,0:27:18.43:124,0,18	0/1:31,0:31:35.96:108,0,36	0/1:33,0:33:55.70:131,0,56	0/1:20,0:22:4.67:83,0,5	0/1:19,0:19:23.25:43,0,23	1/1:5,9:14:26.87:359,27,0	1/1:10,20:30:45.07:674,45,0	1/1:20,39:58:62.27:1083,62,0	0/1:23,0:23:14.25:14,0,39	0/1:17,0:17:9.43:9,0,83	0/1:41,0:39:15.23:15,0,39	0/1:15,0:15:32.22:75,0,32	0/1:34,0:32:86.28:86,0,241	0/1:16,0:16:43.06:96,0,43	1/1:6,0:6:8.64:51,9,0
chr10	9682703	.	ACT	A	8220.68	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=3.065;DP=814;FS=12.489;HRun=0;HaplotypeScore=206.4957;InbreedingCoeff=0.9482;MQ=47.60;MQ0=24;MQRankSum=-2.088;QD=13.77;ReadPosRankSum=-3.037;VQSLOD=3.1618;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:47,3:52:76.83:581,77,0	1/1:9,3:12:29.77:221,30,0	0/0:30,0:12:9.63:0,10,220	0/0:69,0:25:5.15:0,5,330	1/1:13,7:20:26.87:219,27,0	1/1:15,8:22:41.69:337,42,0	1/1:23,7:29:60.04:454,60,0	1/1:25,0:25:50.45:479,50,0	1/1:11,5:16:32.70:243,33,0	1/1:24,9:32:67.71:779,68,0	1/1:6,5:13:17.79:125,18,0	1/1:15,7:22:50.67:390,51,0	1/1:3,12:34:41.40:350,41,0	1/1:24,10:33:71.52:565,72,0	1/1:20,11:34:64.47:582,64,0	1/1:4,10:34:34.90:287,35,0	1/1:21,4:26:47.14:344,47,0	1/1:3,3:18:13.48:100,13,0	0/0:26,0:26:26.15:0,26,266	0/0:30,0:29:43.24:0,43,247	0/0:61,0:60:96.42:0,96,571	1/1:19,4:24:40.94:331,41,0	1/1:17,3:18:27.78:208,28,0	1/1:33,9:40:41.34:380,41,0	1/1:11,5:16:17.80:168,18,0	1/1:22,4:28:35.25:447,35,0	1/1:12,3:18:45.19:353,45,0	1/1:13,2:15:35.71:277,36,0
chr10	9682707	.	ACACT	A	8770.68	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=4.882;DP=795;FS=13.615;HRun=0;HaplotypeScore=220.8243;InbreedingCoeff=0.9843;MQ=46.88;MQ0=23;MQRankSum=-4.167;QD=14.97;ReadPosRankSum=-0.606;VQSLOD=3.1749;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:49,0:48:57.78:463,58,0	1/1:9,3:12:29.71:225,30,0	0/0:27,0:11:18.98:0,19,575	0/0:65,0:26:63.95:0,64,1081	1/1:16,5:20:23.90:237,24,0	1/1:21,1:21:41.99:465,42,0	1/1:27,1:27:53.80:505,54,0	1/1:24,0:24:55.10:429,55,0	1/1:15,4:18:28.19:228,28,0	1/1:24,6:29:50.55:783,51,0	1/1:10,4:14:18.27:129,18,0	1/1:16,7:23:52.94:432,53,0	1/1:23,11:33:41.48:470,41,0	1/1:25,9:32:65.60:599,66,0	1/1:23,11:34:59.44:627,59,0	1/1:23,10:33:34.68:351,35,0	1/1:22,4:26:43.65:400,44,0	1/1:15,3:18:11.92:130,12,0	0/0:25,0:25:51.57:0,52,798	0/0:32,0:31:36.86:0,37,705	0/0:59,0:58:99:0,116,1560	1/1:21,1:22:31.45:259,31,0	1/1:17,3:18:27.37:226,27,0	1/1:40,8:43:38.94:370,39,0	1/1:9,4:13:14.79:198,15,0	1/1:26,3:29:50.70:520,51,0	1/1:15,3:18:45.31:421,45,0	1/1:14,1:15:35.85:305,36,0
chr10	9682709	.	ACT	A	7934.55	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=5.752;DP=789;FS=11.684;HRun=0;HaplotypeScore=202.7711;InbreedingCoeff=0.9896;MQ=47.31;MQ0=20;MQRankSum=-3.986;QD=13.61;ReadPosRankSum=-0.699;VQSLOD=3.4488;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:45,3:47:61.88:475,62,0	1/1:12,0:12:29.71:213,30,0	0/0:30,0:15:24.38:0,24,594	0/0:63,0:27:61.28:0,61,1059	1/1:18,2:19:23.86:194,24,0	1/1:16,6:21:44.65:357,45,0	1/1:21,6:26:53.57:408,54,0	1/1:23,0:23:57.99:449,58,0	1/1:18,0:17:35.75:270,36,0	1/1:27,3:29:55.63:666,56,0	1/1:14,1:15:20.78:149,21,0	1/1:24,0:24:54.11:415,54,0	1/1:34,0:33:41.41:353,41,0	1/1:34,0:32:66.33:511,66,0	1/1:34,0:34:60.70:555,61,0	1/1:33,0:33:34.66:288,35,0	1/1:26,0:26:48.21:347,48,0	1/1:17,0:18:14.43:103,14,0	0/0:24,0:24:44.61:0,45,864	0/0:32,0:32:59.95:0,60,999	0/0:56,0:56:99:0,120,1909	1/1:20,1:21:34.74:275,35,0	1/1:19,0:17:27.32:208,27,0	1/1:47,0:42:38.25:355,38,0	1/1:13,1:14:14.97:143,15,0	1/1:28,1:29:44.53:500,45,0	1/1:19,0:19:50.71:400,51,0	1/1:15,1:16:38.72:302,39,0
chr10	9683355	.	G	GA	574.85	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=-0.688;DP=524;FS=3.158;HRun=9;HaplotypeScore=68.6697;InbreedingCoeff=0.6165;MQ=77.75;MQ0=2;MQRankSum=-1.311;QD=18.54;ReadPosRankSum=-0.688;VQSLOD=3.6159;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:33:71.15:0,71,722	0/0:6,0:6:15:0,15,130	0/0:33,0:23:41.94:0,42,384	0/0:20,0:16:23.96:0,24,158	0/0:8,0:8:17.99:0,18,156	0/0:18,0:18:44.97:0,45,386	0/0:12,0:12:26.96:0,27,231	0/0:17,0:17:41.99:0,42,364	1/1:4,23:27:60.16:664,60,0	0/0:9,0:9:14.99:0,15,130	0/0:12,0:12:20.98:0,21,182	0/0:22,0:22:59.97:0,60,521	0/0:27,0:27:50.94:0,51,439	0/0:16,0:16:35.98:0,36,313	0/0:27,0:27:68.97:0,69,599	0/0:19,0:19:47.97:0,48,417	0/0:26,1:27:47.73:0,48,630	0/0:11,0:11:23.98:0,24,208	0/0:16,0:16:41.99:0,42,365	0/0:18,0:18:50.98:0,51,442	0/0:13,0:13:38.99:0,39,338	0/0:27,0:27:44.65:0,45,542	0/0:18,0:18:47.98:0,48,416	0/0:26,0:26:74.98:0,75,651	0/0:17,1:18:11.81:0,12,331	0/0:13,0:13:29.98:0,30,260	0/0:24,0:24:50.95:0,51,437	0/1:4,0:4:16.23:16,0,43
chr10	9683636	.	A	AT	132.42	PASS	AB=0.857;AC=18;AF=0.346;AN=52;BaseQRankSum=6.526;DP=440;FS=8.005;HRun=0;HaplotypeScore=103.5441;InbreedingCoeff=0.0733;MQ=32.99;MQ0=4;MQRankSum=-0.893;QD=0.51;ReadPosRankSum=-0.707;VQSLOD=0.6643;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:39:0.61:0,1,2	0/1:8,0:8:0.01:0,0,0	./.	./.	0/1:12,2:14:0.01:0,0,0	1/1:15,3:17:0.90:5,1,0	0/1:22,7:29:9.68:27,0,10	0/1:7,10:17:99:121,0,222	1/1:9,1:10:2.92:18,3,0	0/1:20,2:22:11.34:11,0,433	0/1:10,1:11:0.05:0,0,1	0/1:18,2:20:0.06:0,0,1	0/0:20,4:23:4.21:0,4,46	0/1:17,3:19:8.02:8,0,37	0/0:15,3:18:2.94:0,3,43	0/1:1,6:7:0.04:0,0,1	0/0:13,1:14:1.95:0,2,65	0/0:13,0:13:21.21:0,21,258	0/0:7,0:6:18.06:0,18,251	0/0:6,2:8:2.91:0,3,18	0/0:23,0:21:9.03:0,9,125	0/1:17,1:18:0:0,0,1	0/1:12,2:14:0.02:0,0,1	0/1:20,0:18:0.02:0,0,1	0/0:17,7:23:5.30:0,5,54	0/1:20,1:21:15.76:16,0,414	0/1:9,4:13:11.64:36,0,12	0/0:4,2:6:12.04:0,12,167
chr10	9683643	.	TAC	T	415.98	PASS	AB=0.695;AC=31;AF=0.596;AN=52;BaseQRankSum=0.739;DP=501;FS=8.060;HRun=0;HaplotypeScore=111.5894;InbreedingCoeff=0.3598;MQ=34.41;MQ0=7;MQRankSum=1.748;QD=1.06;ReadPosRankSum=0.270;VQSLOD=1.0788;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:43:0.31:1,0,0	0/1:4,4:8:0:0,0,0	./.	./.	0/0:10,0:16:0:0,0,0	0/1:8,0:18:0:0,0,0	1/1:29,0:32:0.78:2,1,0	1/1:22,0:21:2.87:32,3,0	0/1:14,0:14:0:0,0,0	1/1:16,9:25:5.29:63,5,0	0/1:5,7:12:0.03:0,0,0	0/1:7,15:22:0.13:0,0,0	0/0:14,10:23:1.28:0,1,3	1/1:11,10:20:5.65:45,6,0	0/1:8,13:21:26.69:27,0,38	1/1:9,0:9:6.02:66,6,0	0/0:8,9:17:0.47:0,0,2	1/1:11,2:13:8.76:95,9,0	0/0:8,0:7:3.37:0,3,38	0/0:10,0:9:3:0,3,29	0/0:32,0:30:12.01:0,12,140	0/1:11,9:20:0:0,0,0	0/1:10,6:15:0.06:1,0,0	0/1:13,9:21:0.01:0,0,0	1/1:19,0:25:0.36:2,0,0	1/1:15,9:24:5.07:63,5,0	1/1:13,2:15:8.59:60,9,0	1/1:4,2:6:6.80:68,7,0
chr10	9685121	.	C	CA	2647.88	PASS	AB=0.769;AC=12;AF=0.214;AN=56;BaseQRankSum=-11.228;DP=590;FS=4.381;HRun=11;HaplotypeScore=75.1572;InbreedingCoeff=0.7474;MQ=77.40;MQ0=1;MQRankSum=-1.051;QD=16.76;ReadPosRankSum=-0.325;VQSLOD=4.4972;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,27:36:69.66:747,70,0	0/0:12,0:12:20.87:0,21,162	0/0:21,0:21:13.67:0,14,97	0/0:12,0:12:22.13:0,22,161	1/1:4,21:26:57.34:542,57,0	0/1:8,15:23:18.61:375,0,19	1/1:1,23:24:48.10:487,48,0	0/0:26,0:26:8.43:0,8,248	1/1:4,14:19:41.92:410,42,0	0/0:23,0:25:52.32:0,52,384	0/0:19,0:19:38.80:0,39,302	0/0:19,2:21:5.35:0,5,224	0/0:23,0:23:41.74:0,42,321	0/1:13,1:14:6.57:7,0,139	0/0:16,0:16:29.80:0,30,228	0/0:15,0:15:35.85:0,36,277	0/0:32,0:32:71.66:0,72,557	0/0:13,0:14:7.87:0,8,190	0/0:6,0:26:36.66:0,37,108	0/0:3,0:30:52.16:0,52,152	0/0:0,0:13:20.37:0,20,60	0/0:20,3:23:14.32:0,14,294	0/0:11,0:12:28.93:0,29,215	0/0:16,0:18:15.12:0,15,242	1/1:3,12:16:26.89:258,27,0	0/0:21,1:23:19.36:0,19,324	0/0:29,4:34:43.26:0,43,509	0/0:13,0:13:23.86:0,24,185
chr10	9686431	.	TA	T	4177.41	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=11.396;DP=506;FS=1.284;HRun=2;HaplotypeScore=48.3179;InbreedingCoeff=0.9928;MQ=83.87;MQ0=0;MQRankSum=-0.988;QD=35.70;ReadPosRankSum=1.640;VQSLOD=3.8869;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,36:38:96.31:1243,96,0	0/0:5,0:5:15.05:0,15,225	0/0:20,0:20:51.16:0,51,739	0/0:9,0:9:16.45:0,16,267	1/1:0,31:31:90.21:1143,90,0	1/1:0,20:20:60.20:779,60,0	1/1:0,12:12:30.10:390,30,0	0/0:27,0:27:81.25:0,81,1161	0/0:10,0:10:30.10:0,30,450	0/0:27,0:27:78.26:0,78,1153	0/0:15,0:15:42.13:0,42,610	0/0:11,0:11:30.10:0,30,449	0/0:18,0:18:54.18:0,54,809	0/0:13,0:13:39.13:0,39,582	0/0:15,0:15:45.13:0,45,633	0/0:18,0:18:54.17:0,54,789	0/0:25,0:25:75.24:0,75,1099	0/0:14,0:14:42.11:0,42,587	0/0:22,0:22:63.21:0,63,942	0/0:25,0:25:72.22:0,72,1039	0/0:16,0:16:45.15:0,45,674	0/0:21,0:21:63.19:0,63,905	0/0:18,0:18:54.17:0,54,789	0/0:15,0:15:42.14:0,42,629	1/1:0,16:16:48.16:623,48,0	0/0:19,0:19:57.19:0,57,854	0/0:18,0:17:54.18:0,54,808	0/0:8,0:8:24.08:0,24,359
chr10	9687095	.	ACATT	A	191.39	PASS	AB=0.931;AC=7;AF=0.125;AN=56;BaseQRankSum=11.789;DP=879;FS=45.639;HRun=0;HaplotypeScore=254.5870;InbreedingCoeff=0.2609;MQ=59.04;MQ0=0;MQRankSum=-9.295;QD=1.45;ReadPosRankSum=2.023;VQSLOD=1.4562;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,1:36:70.50:0,71,2654	0/0:19,0:19:51.18:0,51,1300	0/0:25,0:25:67.78:0,68,1677	0/0:38,0:37:90.27:0,90,2045	0/1:28,3:31:9.32:9,0,1945	0/1:38,6:44:48.20:48,0,2439	0/0:17,0:17:1.25:0,1,848	0/0:60,0:60:99:0,175,4449	0/0:39,1:40:77.39:0,77,2701	0/0:34,0:34:96.30:0,96,2497	0/0:41,3:44:54.65:0,55,3034	0/0:32,1:33:55.96:0,56,2029	0/0:34,4:38:84.91:0,85,2385	0/0:36,1:37:53.33:0,53,2612	0/0:33,1:34:66.74:0,67,2347	0/0:40,1:41:75.12:0,75,2859	0/0:25,1:26:63.11:0,63,1693	0/0:20,0:20:57.16:0,57,1392	0/1:6,0:6:32.88:33,0,33	1/1:8,7:15:21.44:217,21,0	0/1:4,0:4:0:0,0,0	0/0:34,1:35:62.13:0,62,2221	0/0:28,5:33:5.03:0,5,1949	0/0:41,0:41:99:0,112,2891	0/0:37,3:40:19.31:0,19,2521	0/1:27,5:32:7.01:7,0,1690	0/0:37,0:37:65.18:0,65,2716	0/0:19,0:19:57.20:0,57,1536
chr10	9687110	.	ATAT	A	361.46	PASS	AB=0.623;AC=3;AF=0.054;AN=56;BaseQRankSum=10.236;DP=850;FS=2.789;HRun=0;HaplotypeScore=239.3252;InbreedingCoeff=-0.0510;MQ=57.73;MQ0=0;MQRankSum=-8.484;QD=12.46;ReadPosRankSum=-0.574;VQSLOD=2.9374;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:93.88:0,94,2322	0/0:17,0:17:51.18:0,51,1228	0/0:31,0:27:74.77:0,75,1736	0/0:28,0:25:61.21:0,61,1413	0/0:31,0:31:60.23:0,60,1662	0/0:44,0:44:78.46:0,78,2648	0/0:17,0:17:48.16:0,48,1078	0/0:44,0:44:99:0,129,3071	0/0:36,0:36:96.28:0,96,2468	0/0:37,0:37:99:0,108,2578	0/0:36,0:36:69.10:0,69,2323	0/0:32,0:32:81.60:0,82,2013	0/0:39,0:39:58.75:0,59,2284	0/0:37,0:37:99:0,106,2570	0/0:34,0:34:88.10:0,88,2199	0/0:38,0:38:99:0,111,2640	0/0:27,0:27:72.69:0,73,1615	0/0:17,0:17:51.16:0,51,1170	0/1:1,5:6:29.28:261,0,29	0/1:11,4:15:35.60:134,0,36	0/1:1,7:8:21.67:67,0,22	0/0:32,0:32:81.68:0,82,1981	0/0:30,0:30:55.58:0,56,1786	0/0:42,0:42:99:0,115,2663	0/0:38,0:38:88.29:0,88,2319	0/0:36,0:36:30.81:0,31,1978	0/0:35,0:35:95.54:0,96,2246	0/0:22,0:22:66.23:0,66,1586
chr10	9687142	.	TCA	T	3655.66	PASS	AB=0.928;AC=22;AF=0.393;AN=56;BaseQRankSum=12.235;DP=852;FS=2.172;HRun=0;HaplotypeScore=189.7601;InbreedingCoeff=0.2340;MQ=51.75;MQ0=17;MQRankSum=3.268;QD=7.43;ReadPosRankSum=0.936;VQSLOD=3.6274;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:18,14:32:19.31:432,19,0	0/0:17,0:17:39.13:0,39,610	0/0:38,0:14:6.49:0,6,77	0/0:43,0:20:14.05:0,14,151	1/1:14,17:31:44.51:513,45,0	1/1:18,21:41:51.85:774,52,0	1/1:11,19:32:41.08:500,41,0	0/1:33,3:36:20.96:21,0,823	1/1:12,18:29:54.08:587,54,0	0/0:37,2:39:5.69:0,6,958	0/1:23,2:25:39.89:40,0,311	0/1:26,3:29:36.06:36,0,843	0/0:31,1:32:31.23:0,31,950	0/0:35,2:37:26.45:0,26,1116	0/1:30,1:31:9.62:10,0,760	0/0:29,1:30:43.55:0,44,1004	0/0:25,0:26:44.64:0,45,670	0/1:12,2:14:48.91:49,0,214	0/0:19,0:16:21.93:0,22,186	0/1:21,1:22:24.68:25,0,269	0/0:17,0:16:14.42:0,14,142	0/1:28,2:29:9.78:10,0,748	0/1:27,2:29:18.83:19,0,647	0/1:38,4:42:87.62:88,0,978	1/1:16,22:38:40.71:487,41,0	0/0:40,1:41:34.15:0,34,904	0/1:28,1:30:66.60:67,0,487	0/0:20,0:19:42.13:0,42,655
chr10	9687557	.	GGTGT	G	778.43	PASS	AB=0.946;AC=32;AF=0.842;AN=38;BaseQRankSum=0.223;DP=502;FS=7.715;HRun=0;HaplotypeScore=92.6390;InbreedingCoeff=0.1342;MQ=67.84;MQ0=20;MQRankSum=0.743;QD=2.28;ReadPosRankSum=0.966;VQSLOD=0.8612;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:32:4.80:5,0,14	./.	./.	./.	0/1:16,0:16:0:0,0,0	1/1:19,0:19:2.80:8,3,0	0/1:24,0:21:0:0,0,0	./.	1/1:9,0:9:3.01:45,3,0	1/1:15,0:16:3:28,3,0	./.	1/1:14,3:19:9.01:136,9,0	1/1:14,0:14:3.01:45,3,0	1/1:12,0:12:3:28,3,0	1/1:12,0:12:9.02:115,9,0	1/1:10,1:11:2.82:45,3,0	1/1:24,1:24:5.60:90,6,0	0/1:13,5:17:6.40:40,0,6	1/1:11,0:10:0.47:1,0,0	./.	1/1:28,0:25:2.22:7,2,0	1/1:24,0:20:3.01:44,3,0	./.	1/1:24,1:24:5.91:91,6,0	./.	0/0:19,0:17:0.47:0,0,1	1/1:18,4:22:8.86:136,9,0	./.
chr10	9687605	.	TGTGTGTGTGTGTAC	T	831.76	PASS	AB=1.000;AC=8;AF=0.148;AN=54;BaseQRankSum=7.045;DP=556;FS=14.249;HRun=0;HaplotypeScore=158.2120;InbreedingCoeff=0.2584;MQ=48.88;MQ0=59;MQRankSum=1.037;QD=6.30;ReadPosRankSum=0.565;VQSLOD=2.0006;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:42,0:39:99:671,0,133	0/0:8,0:8:24.08:0,24,748	0/0:35,0:5:9.05:0,9,89	0/0:37,0:3:5.98:0,6,55	./.	0/1:15,0:15:99:144,0,162	1/1:25,0:22:1.55:4,2,0	0/0:23,0:21:59.56:0,60,928	0/0:17,0:17:35.41:0,35,786	0/0:17,0:16:48.13:0,48,897	0/0:14,0:14:27.09:0,27,633	0/0:24,0:23:41.49:0,41,909	0/0:16,0:15:36.12:0,36,779	0/0:13,0:13:24.08:0,24,587	0/0:15,0:13:33.08:0,33,643	0/0:20,0:19:51.65:0,52,1102	0/0:27,0:25:54.17:0,54,1187	0/0:15,0:14:22.89:0,23,643	0/1:8,0:7:37.36:90,0,37	0/0:4,11:15:0.47:0,0,2	0/1:30,0:26:0.09:0,0,281	0/0:24,0:19:36.12:0,36,737	0/0:14,0:10:21.07:0,21,452	0/0:27,0:25:43.74:0,44,1135	1/1:12,0:12:3.01:36,3,0	0/0:14,0:13:36.12:0,36,656	0/0:16,0:13:27.56:0,28,630	0/0:10,0:5:15.05:0,15,328
chr10	9687607	.	TGTGTGTGTGTAC	T	1318.31	PASS	AB=1.000;AC=8;AF=0.148;AN=54;BaseQRankSum=5.598;DP=543;FS=4.485;HRun=0;HaplotypeScore=141.6078;InbreedingCoeff=0.3765;MQ=49.31;MQ0=58;MQRankSum=2.068;QD=10.72;ReadPosRankSum=0.268;VQSLOD=1.8990;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:37,0:35:41.42:871,0,41	0/0:8,0:8:24.07:0,24,584	0/0:35,0:5:8.45:0,8,88	0/0:37,0:3:5.97:0,6,55	./.	0/1:13,0:13:7.22:286,0,7	1/1:6,17:21:3.01:40,3,0	0/0:22,0:20:56.54:0,57,880	0/0:17,0:17:35.84:0,36,663	0/0:17,0:16:44.94:0,45,754	0/0:12,0:12:27.09:0,27,586	0/0:23,0:22:38.49:0,38,745	0/0:15,0:15:30.10:0,30,566	0/0:14,0:14:26.58:0,27,515	0/0:15,0:13:32.10:0,32,530	0/0:19,0:18:51.14:0,51,863	0/0:26,0:24:51.17:0,51,959	0/0:15,0:14:22.59:0,23,511	0/1:9,0:8:3.24:187,0,3	0/0:14,0:14:0.47:0,0,1	0/1:29,0:25:2.97:3,0,123	0/0:24,0:19:36.08:0,36,620	0/0:14,0:10:24.08:0,24,458	0/0:27,0:25:41.20:0,41,937	1/1:2,10:12:3.01:54,3,0	0/0:15,0:14:36.07:0,36,574	0/0:17,0:14:21.07:0,21,443	0/0:10,0:5:15.05:0,15,307
chr10	9687617	.	TAC	T	1139.72	PASS	AB=0.976;AC=9;AF=0.173;AN=52;BaseQRankSum=6.016;DP=516;FS=15.439;HRun=0;HaplotypeScore=78.1857;InbreedingCoeff=0.7315;MQ=53.41;MQ0=44;MQRankSum=1.214;QD=10.96;ReadPosRankSum=1.775;VQSLOD=2.2159;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:31,2:33:59.90:811,60,0	0/0:7,0:7:21.07:0,21,334	0/0:36,0:5:6.02:0,6,81	0/1:39,0:6:7.41:7,0,89	./.	1/1:9,1:10:9.83:229,10,0	./.	0/0:28,0:26:72.25:0,72,1204	0/0:17,0:17:39.11:0,39,563	0/0:21,0:20:60.19:0,60,1005	0/0:12,0:12:30.10:0,30,467	0/0:23,0:23:47.45:0,47,669	0/0:12,0:12:30.05:0,30,439	0/0:10,0:10:24.08:0,24,361	0/0:16,0:15:42.05:0,42,591	0/0:17,0:17:48.16:0,48,750	0/0:20,0:19:45.11:0,45,654	0/0:11,0:11:17.72:0,18,236	1/1:8,1:8:16.87:204,17,0	0/0:14,0:14:0.47:0,0,1	0/0:4,22:24:4.80:0,5,48	0/0:18,0:16:36.12:0,36,558	0/0:9,0:8:21.07:0,21,335	0/0:27,0:26:44.62:0,45,661	1/1:12,0:12:3.01:34,3,0	0/0:18,0:18:45.15:0,45,752	0/0:16,0:13:30.07:0,30,417	0/0:10,0:5:15.05:0,15,232
chr10	9687800	.	T	TA	3674.76	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-6.639;DP=657;FS=4.950;HRun=7;HaplotypeScore=165.7635;InbreedingCoeff=0.9865;MQ=63.67;MQ0=0;MQRankSum=-0.019;QD=28.49;ReadPosRankSum=2.102;VQSLOD=1.6416;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,35:38:87.27:1051,87,0	0/0:12,0:12:33.05:0,33,318	0/0:26,0:24:63.09:0,63,607	0/0:17,0:17:45.05:0,45,426	1/1:2,24:26:66.16:780,66,0	1/1:3,17:20:45.14:544,45,0	1/1:2,14:16:39.12:467,39,0	0/0:30,0:30:81.12:0,81,778	0/0:23,0:23:63.06:0,63,600	0/0:33,0:33:81.12:0,81,782	0/0:17,0:17:48.08:0,48,464	0/0:29,0:29:87.13:0,87,834	0/0:28,0:28:81.12:0,81,776	0/0:21,0:21:57.09:0,57,550	0/0:24,0:24:69.11:0,69,666	0/0:18,0:18:51.08:0,51,493	0/0:33,0:33:87.13:0,87,840	0/0:25,0:26:61.89:0,62,608	0/0:19,0:19:45.05:0,45,430	0/0:23,0:23:60.09:0,60,579	0/0:23,0:23:54.04:0,54,514	0/0:23,0:23:63.10:0,63,608	0/0:18,0:19:53.12:0,53,498	0/0:28,0:28:81.08:0,81,772	1/1:3,26:29:69.21:834,69,0	0/0:32,0:32:87.11:0,87,826	0/0:19,0:19:51.08:0,51,492	0/0:4,0:4:9.01:0,9,87
chr10	9690081	.	T	TAAA	3411.15	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=11.850;DP=708;FS=9.506;HRun=0;HaplotypeScore=114.3177;InbreedingCoeff=0.9990;MQ=84.28;MQ0=0;MQRankSum=-10.693;QD=62.02;ReadPosRankSum=0.204;VQSLOD=4.8601;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,117,2104	0/0:13,0:13:39.12:0,39,696	0/0:25,0:25:75.25:0,75,1327	0/0:24,0:24:69.21:0,69,1206	0/0:29,0:29:84.29:0,84,1565	0/0:21,0:21:57.20:0,57,1048	0/0:26,0:26:78.27:0,78,1446	0/0:35,0:35:99:0,99,1722	0/0:23,0:23:69.21:0,69,1224	0/0:39,0:39:99:0,111,2067	0/0:28,0:28:84.25:0,84,1530	0/0:23,0:23:69.24:0,69,1286	0/0:29,0:29:87.28:0,87,1589	0/0:28,0:28:78.27:0,78,1447	0/0:41,0:41:99:0,123,2246	0/0:31,0:31:93.29:0,93,1673	0/0:20,0:20:57.18:0,57,1032	0/0:10,0:10:30.10:0,30,552	1/1:4,9:13:39.11:753,39,0	1/1:4,30:34:93.30:2097,93,0	1/1:0,8:8:24.08:562,24,0	0/0:30,0:30:90.29:0,90,1647	0/0:20,0:20:57.20:0,57,1059	0/0:18,0:17:54.19:0,54,994	0/0:30,0:30:90.31:0,90,1678	0/0:23,0:23:66.23:0,66,1230	0/0:29,0:28:87.27:0,87,1547	0/0:19,0:19:57.15:0,57,1026
chr10	9690086	.	A	ATT	3057.92	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=12.247;DP=714;FS=14.659;HRun=0;HaplotypeScore=105.8850;InbreedingCoeff=0.9995;MQ=84.54;MQ0=0;MQRankSum=-11.714;QD=53.65;ReadPosRankSum=0.165;VQSLOD=2.7657;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,114,1833	0/0:13,0:13:39.13:0,39,636	0/0:26,0:26:72.24:0,72,1141	0/0:25,0:25:72.25:0,72,1161	0/0:26,0:26:78.27:0,78,1270	0/0:19,0:19:57.18:0,57,906	0/0:30,0:30:87.28:0,87,1392	0/0:31,0:31:90.30:0,90,1451	0/0:23,0:23:66.23:0,66,1076	0/0:42,0:42:99:0,123,1957	0/0:29,0:29:87.28:0,87,1385	0/0:23,0:23:69.24:0,69,1123	0/0:29,0:29:84.29:0,84,1370	0/0:29,0:29:81.26:0,81,1297	0/0:41,0:41:99:0,120,1954	0/0:31,0:31:93.32:0,93,1513	0/0:21,0:21:57.17:0,57,903	0/0:10,0:10:30.10:0,30,489	1/1:2,9:11:33.03:615,33,0	1/1:6,30:36:99:1998,102,0	1/1:2,8:10:30.10:588,30,0	0/0:29,0:29:87.28:0,87,1396	0/0:19,0:19:57.19:0,57,929	0/0:18,0:18:54.18:0,54,881	0/0:32,0:32:96.33:0,96,1562	0/0:25,0:25:66.23:0,66,1077	0/0:28,0:27:78.22:0,78,1244	0/0:20,0:20:60.20:0,60,979
chr10	9691113	.	TAAC	T	3199.77	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=10.682;DP=676;FS=5.886;HRun=0;HaplotypeScore=92.2642;InbreedingCoeff=0.9793;MQ=81.98;MQ0=0;MQRankSum=-3.477;QD=36.36;ReadPosRankSum=0.262;VQSLOD=3.9428;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:72.25:0,72,1607	0/0:11,0:11:30.10:0,30,669	0/0:33,0:32:58.47:0,58,1476	0/0:19,0:19:53.89:0,54,975	0/0:30,0:30:84.29:0,84,1853	0/0:14,0:14:33.09:0,33,653	0/0:19,0:19:57.19:0,57,1182	0/0:26,0:26:69.22:0,69,1419	0/0:21,0:21:57.20:0,57,1258	0/0:32,0:32:90.29:0,90,1886	0/0:18,0:18:54.18:0,54,1088	0/0:37,0:37:99:0,108,2310	0/0:23,0:23:69.22:0,69,1477	0/0:19,0:19:54.19:0,54,1169	0/0:21,0:21:63.20:0,63,1364	0/0:34,0:34:99:0,102,2207	0/0:24,0:24:66.21:0,66,1410	0/0:14,0:14:38.41:0,38,702	1/1:4,15:19:44.26:615,44,0	1/1:1,32:33:96.27:1506,96,0	1/1:1,35:36:75.26:1221,75,0	0/0:16,0:16:48.12:0,48,908	0/0:20,0:20:60.16:0,60,1172	0/0:31,0:31:90.28:0,90,1906	0/0:39,0:38:99:0,117,2469	0/0:26,0:26:66.21:0,66,1393	0/0:33,0:33:99:0,99,2126	0/0:3,0:3:9.03:0,9,201
chr10	9691709	.	AACACAC	A	434.33	PASS	AC=10;AF=0.185;AN=54;BaseQRankSum=2.324;DP=654;FS=1.085;HRun=0;HaplotypeScore=134.0949;InbreedingCoeff=0.7534;MQ=71.66;MQ0=11;MQRankSum=-4.378;QD=4.22;ReadPosRankSum=-1.713;VQSLOD=2.4539;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:17,13:30:8.91:114,9,0	0/0:5,0:5:6.02:0,6,166	./.	0/0:35,0:27:2.96:0,3,95	1/1:9,10:19:8.70:61,9,0	1/1:4,8:12:15.01:265,15,0	1/1:16,10:26:5.89:122,6,0	0/0:23,0:18:6.09:0,6,29	0/0:20,0:20:18.04:0,18,227	0/0:11,0:24:51.13:0,51,1162	0/0:8,0:22:5.62:0,6,94	0/0:16,0:29:27.08:0,27,615	0/0:20,0:27:24.07:0,24,521	0/0:20,0:21:39.12:0,39,969	0/0:19,0:37:45.14:0,45,1055	0/0:11,0:20:15.05:0,15,366	0/0:18,0:28:27.05:0,27,635	0/0:10,0:19:24:0,24,514	0/0:20,0:20:22.54:0,23,474	0/0:10,0:21:9.03:0,9,189	0/0:39,0:38:37.87:0,38,741	0/0:11,0:22:20.86:0,21,524	0/0:21,0:20:19.63:0,20,557	0/0:21,0:31:21.03:0,21,456	1/1:7,8:16:2.92:20,3,0	0/0:12,0:22:44.13:0,44,1000	0/0:5,0:14:9.01:0,9,142	0/0:10,0:14:18.06:0,18,397
chr10	9694099	.	GACACAGACAC	G	816.71	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=0.360;DP=657;FS=11.678;HRun=0;HaplotypeScore=174.4108;InbreedingCoeff=0.8104;MQ=57.06;MQ0=16;MQRankSum=-1.144;QD=11.67;ReadPosRankSum=0.085;VQSLOD=1.8969;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:39:74.49:0,74,2075	0/0:6,0:5:9:0,9,150	0/0:39,0:11:7.11:0,7,69	0/0:49,0:24:17.67:0,18,340	0/0:14,0:14:20.62:0,21,452	0/0:26,0:25:36.90:0,37,629	0/0:25,0:24:56.97:0,57,660	0/0:28,0:28:66.25:0,66,546	0/0:17,0:17:29.33:0,29,273	0/0:14,0:13:38.91:0,39,616	0/0:15,0:15:35.80:0,36,958	0/0:20,0:20:39.07:0,39,1218	0/0:19,0:19:45.03:0,45,901	0/0:29,0:29:56.80:0,57,1051	0/0:25,0:25:40.02:0,40,1387	0/0:22,0:22:36.03:0,36,1221	0/0:36,0:36:63.05:0,63,1617	0/0:17,0:17:33.03:0,33,713	1/1:15,0:15:34.95:306,35,0	1/1:2,14:17:1.39:74,1,0	1/1:38,0:36:29.86:567,30,0	0/0:26,0:26:48.01:0,48,874	0/0:18,0:18:27.01:0,27,557	0/0:34,0:34:51.21:0,51,1361	0/0:23,0:23:45.08:0,45,1125	0/0:18,0:18:22.95:0,23,667	0/0:25,0:25:54.04:0,54,878	0/0:1,0:1:2.68:0,3,11
chr10	9694105	.	G	GAC	2604.21	PASS	AB=0.817;AC=29;AF=0.604;AN=48;BaseQRankSum=-4.204;DP=666;FS=0.824;HRun=0;HaplotypeScore=97.7724;InbreedingCoeff=-0.5540;MQ=55.52;MQ0=19;MQRankSum=0.159;QD=4.65;ReadPosRankSum=-0.667;VQSLOD=2.5530;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:42,1:42:25.21:229,0,25	./.	./.	./.	0/1:7,0:11:20.13:20,0,26	0/1:19,8:27:49.43:93,0,49	1/1:18,7:25:6.02:88,6,0	1/1:31,0:31:2.97:20,3,0	0/1:18,0:18:19.57:58,0,20	1/1:10,6:16:15.02:180,15,0	0/1:15,1:16:17.59:84,0,18	0/1:17,4:21:23.12:79,0,23	0/1:12,6:19:8.58:121,0,9	0/1:19,9:28:29.22:29,0,114	0/1:21,3:26:25.36:182,0,25	0/1:8,13:22:8.57:234,0,9	0/1:21,16:38:47.64:239,0,48	1/1:10,5:16:8.91:115,9,0	0/1:13,0:14:20.24:20,0,25	0/0:19,0:19:2.67:0,3,13	0/1:40,0:38:39.85:103,0,40	0/1:19,8:26:39.91:76,0,40	0/1:10,6:16:23.21:80,0,23	0/1:20,15:35:2.16:344,0,2	0/1:14,5:21:64.51:113,0,65	1/1:19,0:19:0.93:141,1,0	1/1:16,8:25:8.06:94,8,0	./.
chr10	9694381	.	GA	G	5058.40	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=12.371;DP=754;FS=3.523;HRun=3;HaplotypeScore=70.1601;InbreedingCoeff=0.9993;MQ=77.54;MQ0=0;MQRankSum=-2.161;QD=33.50;ReadPosRankSum=1.764;VQSLOD=5.4531;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,53:56:99:1785,144,0	0/0:9,0:9:27.09:0,27,389	0/0:30,0:30:84.19:0,84,1162	0/0:22,0:21:61.04:0,61,773	1/1:1,23:24:69.22:855,69,0	1/1:0,26:26:72.23:893,72,0	1/1:1,23:24:66.21:818,66,0	0/0:28,0:28:84.28:0,84,1195	0/0:35,0:35:99:0,102,1450	0/0:30,0:30:90.29:0,90,1263	0/0:17,0:17:51.16:0,51,716	0/0:32,0:32:87.28:0,87,1233	0/0:30,0:30:87.28:0,87,1233	0/0:39,0:39:99:0,114,1622	0/0:39,0:39:99:0,117,1651	0/0:27,0:27:78.26:0,78,1123	0/0:17,0:17:45.15:0,45,648	0/0:15,0:15:45.15:0,45,648	0/0:17,0:17:48.16:0,48,691	0/0:26,0:26:72.24:0,72,1037	0/0:34,0:34:93.30:0,93,1312	0/0:37,0:37:99:0,108,1547	0/0:18,0:18:48.15:0,48,691	0/0:29,0:29:84.22:0,84,1167	1/1:1,20:21:57.18:707,57,0	0/0:33,0:33:96.32:0,96,1376	0/0:31,0:31:93.31:0,93,1339	0/0:8,0:8:24.08:0,24,346
chr10	9697032	.	AACACAC	A	1273.26	PASS	AB=0.921;AC=30;AF=0.714;AN=42;BaseQRankSum=-0.426;DP=492;FS=0.000;HRun=0;HaplotypeScore=106.9150;InbreedingCoeff=0.3465;MQ=71.09;MQ0=10;MQRankSum=-1.297;QD=4.60;ReadPosRankSum=1.337;VQSLOD=1.9675;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:30:6.02:0,6,169	1/1:8,0:7:6.02:92,6,0	./.	./.	0/0:17,0:17:3.01:0,3,93	0/0:10,0:12:6.02:0,6,137	0/0:18,0:19:18.95:0,19,493	./.	1/1:12,0:12:3.01:60,3,0	1/1:17,0:16:4.62:67,5,0	./.	1/1:11,2:13:5.98:80,6,0	1/1:8,2:9:3:60,3,0	1/1:14,1:17:5.20:101,5,0	0/1:13,2:16:12.91:150,0,13	1/1:11,3:15:5.76:101,6,0	1/1:16,7:23:6.02:120,6,0	./.	1/1:17,3:20:9.01:142,9,0	./.	0/1:31,0:30:37.11:38,0,37	1/1:11,7:20:12.51:200,13,0	1/1:13,0:13:2.96:20,3,0	1/1:22,4:25:3.01:60,3,0	0/0:15,0:20:8.67:0,9,94	1/1:18,0:17:4.71:78,5,0	1/1:17,0:18:3.01:42,3,0	./.
chr10	9699400	.	C	CAAA	2547.57	PASS	AB=0.817;AC=16;AF=0.286;AN=56;BaseQRankSum=3.111;DP=521;FS=12.191;HRun=13;HaplotypeScore=90.0384;InbreedingCoeff=0.8615;MQ=55.50;MQ0=8;MQRankSum=-3.160;QD=16.23;ReadPosRankSum=-2.523;VQSLOD=0.6067;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:17,9:33:51.97:669,52,0	0/0:9,0:9:20.93:0,21,211	0/0:8,0:10:9.48:0,9,133	0/1:5,0:4:3.21:3,0,39	1/1:10,9:23:33.78:434,34,0	1/1:5,10:16:30.08:504,30,0	1/1:8,7:18:33.05:460,33,0	0/0:22,0:25:29.58:0,30,328	0/0:17,0:17:35.83:0,36,371	0/0:28,0:27:44.45:0,44,450	0/0:12,0:14:23.79:0,24,229	0/0:9,0:13:25.36:0,25,273	0/0:20,0:22:20.34:0,20,384	0/0:19,0:20:32.65:0,33,325	0/0:15,0:17:26.58:0,27,261	0/0:11,0:12:22.37:0,22,254	0/0:30,0:34:64.28:0,64,697	0/0:17,0:18:35.85:0,36,371	1/1:10,0:16:13.21:97,13,0	0/1:8,1:19:1.17:205,0,1	1/1:4,1:13:15.40:143,15,0	0/0:19,0:21:28.18:0,28,297	0/0:21,0:20:29.19:0,29,306	0/0:18,0:22:38.76:0,39,380	1/1:6,4:12:18:231,18,0	0/0:23,0:26:32.65:0,33,408	0/0:18,0:22:19.76:0,20,236	0/0:6,0:5:8.88:0,9,86
chr10	9699846	.	G	GCA	2431.17	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=-7.348;DP=913;FS=7.345;HRun=0;HaplotypeScore=140.0154;InbreedingCoeff=0.8023;MQ=61.91;MQ0=11;MQRankSum=0.928;QD=18.42;ReadPosRankSum=0.468;VQSLOD=3.4865;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:57:24.36:0,24,310	0/0:19,0:19:51.13:0,51,607	0/0:33,0:8:8.50:0,9,71	0/0:33,0:18:21.37:0,21,186	0/1:26,0:26:19.24:19,0,176	0/0:27,0:27:27.21:0,27,230	0/0:39,0:39:40.16:0,40,353	0/0:31,0:31:21.13:0,21,614	0/0:43,0:43:99:0,102,1211	0/0:53,0:52:99:0,132,1599	0/0:15,0:17:36.62:0,37,379	0/0:32,0:32:62.91:0,63,729	0/0:35,0:35:96.08:0,96,1103	0/0:42,0:45:99:0,108,1242	0/0:35,0:34:87.10:0,87,991	0/0:33,0:33:75.23:0,75,916	0/0:37,0:39:90.07:0,90,1039	0/0:26,0:26:70.46:0,70,842	1/1:9,10:19:33.11:493,33,0	1/1:4,22:26:54.18:827,54,0	1/1:17,42:60:12.18:1238,12,0	0/0:29,0:29:72.22:0,72,879	0/0:21,0:21:51.16:0,51,623	0/0:42,0:42:94.04:0,94,1114	0/0:31,0:31:21.62:0,22,243	0/0:35,0:35:78.96:0,79,931	0/0:19,0:20:47.93:0,48,524	0/0:6,0:6:15.05:0,15,181
chr10	9699863	.	A	AAC	4730.45	PASS	AB=0.786;AC=10;AF=0.179;AN=56;BaseQRankSum=-10.913;DP=917;FS=6.086;HRun=0;HaplotypeScore=123.1824;InbreedingCoeff=0.7863;MQ=59.84;MQ0=12;MQRankSum=-0.354;QD=23.30;ReadPosRankSum=3.602;VQSLOD=5.1794;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:18,38:56:26.46:1460,26,0	0/0:18,0:18:51.13:0,51,611	0/0:37,0:12:27.05:0,27,318	0/0:38,0:24:40.26:0,40,483	1/1:3,19:24:45.15:691,45,0	0/1:7,21:28:29.90:599,0,30	1/1:13,30:43:28.70:1002,29,0	0/0:29,0:29:57.15:0,57,676	0/0:38,0:38:99:0,99,1192	0/0:53,0:52:99:0,129,1593	0/0:15,0:15:33.06:0,33,393	0/0:29,0:29:66.16:0,66,795	0/0:38,0:38:77.35:0,77,1183	0/0:43,0:43:99:0,105,1278	0/0:36,0:36:90.07:0,90,1053	0/0:31,0:31:78.24:0,78,962	0/0:40,0:40:99:0,102,1206	0/0:31,0:31:81.16:0,81,980	0/1:18,0:18:1.70:2,0,176	0/0:27,0:26:26.99:0,27,176	0/0:60,0:60:61.59:0,62,578	0/0:31,0:31:87.22:0,87,1047	0/0:20,0:20:57.01:0,57,687	0/0:42,0:42:96.30:0,96,1198	1/1:5,28:34:59.82:977,60,0	0/0:29,0:29:67.10:0,67,826	0/0:20,0:21:62.37:0,62,708	0/0:6,0:6:9.03:0,9,113
chr10	9700762	.	TG	T	8489.12	PASS	AB=0.825;AC=43;AF=0.768;AN=56;BaseQRankSum=0.299;DP=698;FS=5.407;HRun=10;HaplotypeScore=90.4306;InbreedingCoeff=0.7507;MQ=68.41;MQ0=4;MQRankSum=0.123;QD=15.24;ReadPosRankSum=7.645;VQSLOD=4.8712;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:6.58:0,7,516	1/1:0,11:11:32.99:286,33,0	0/1:30,0:26:4.43:4,0,387	0/0:30,0:26:36.71:0,37,357	0/0:24,1:25:15.56:0,16,386	0/0:15,0:16:38.93:0,39,404	0/0:29,0:29:63.11:0,63,666	1/1:9,5:14:17.98:155,18,0	1/1:3,18:21:50.99:443,51,0	1/1:14,23:36:77.83:675,78,0	1/1:10,13:23:43.79:369,44,0	1/1:3,18:19:47.99:417,48,0	1/1:5,16:20:17.81:383,18,0	1/1:5,35:39:99:884,102,0	1/1:4,27:28:68.98:599,69,0	1/1:8,21:29:35.79:540,36,0	1/1:9,22:31:74.97:650,75,0	1/1:6,18:24:50.15:463,50,0	0/1:10,0:36:2.87:64,0,3	1/1:1,1:27:46.24:151,46,0	1/1:2,0:19:30.33:89,30,0	1/1:6,17:23:47.57:416,48,0	1/1:9,11:19:38.85:338,39,0	1/1:10,23:32:45.69:619,46,0	0/1:15,2:17:6.99:7,0,385	1/1:5,13:18:41.97:362,42,0	1/1:4,18:22:47.99:417,48,0	1/1:2,7:9:19.81:160,20,0
chr10	9700859	.	ACCTGAAGATATATCAATTGTGGC	A	6933.57	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=9.895;DP=639;FS=1.303;HRun=0;HaplotypeScore=372.6070;InbreedingCoeff=0.9896;MQ=88.69;MQ0=1;MQRankSum=-10.082;QD=78.79;ReadPosRankSum=3.269;VQSLOD=3.6408;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,14:24:27.09:1523,27,0	0/0:14,0:14:42.14:0,42,3941	0/0:31,0:30:78.74:0,79,4653	0/0:28,0:26:69.23:0,69,3634	1/1:2,10:12:14.69:861,15,0	1/1:7,10:17:24.08:1512,24,0	1/1:10,6:16:18.06:1086,18,0	0/0:23,0:23:54.19:0,54,3694	0/0:14,0:14:42.14:0,42,4406	0/0:29,0:29:81.27:0,81,7206	0/0:15,0:15:39.12:0,39,3813	0/0:20,0:20:60.21:0,60,5961	0/0:22,0:22:66.21:0,66,5851	0/0:21,0:21:51.18:0,51,4852	0/0:43,0:43:99:0,126,12253	0/0:33,0:33:93.32:0,93,9647	0/0:25,0:25:75.26:0,75,7832	0/0:18,0:18:48.16:0,48,3962	0/0:25,0:25:69.24:0,69,5426	0/0:25,0:25:75.26:0,75,6929	0/0:24,0:24:69.24:0,69,7003	0/0:29,0:29:84.29:0,84,7930	0/0:27,0:27:81.28:0,81,8063	0/0:27,0:27:81.28:0,81,8064	1/1:7,11:18:33.11:1952,33,0	0/0:33,0:33:93.32:0,93,9283	0/0:20,0:20:60.19:0,60,5591	0/0:5,0:5:15.05:0,15,1402
chr10	9700958	.	AT	A	3463.80	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=15.519;DP=749;FS=2.204;HRun=6;HaplotypeScore=94.0301;InbreedingCoeff=0.9999;MQ=88.29;MQ0=0;MQRankSum=-4.293;QD=26.04;ReadPosRankSum=1.084;VQSLOD=3.6986;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,28:30:72.18:768,72,0	0/0:15,0:15:39.13:0,39,513	0/0:25,0:25:54.16:0,54,743	0/0:31,0:31:71.56:0,72,871	1/1:2,21:23:54.13:577,54,0	1/1:3,21:24:63.15:671,63,0	1/1:2,24:26:60.15:643,60,0	0/0:36,0:36:96.31:0,96,1262	0/0:27,0:27:72.23:0,72,947	0/0:39,0:39:99:0,105,1367	0/0:17,0:17:51.16:0,51,665	0/0:28,1:29:55.02:0,55,1056	0/0:31,0:31:87.28:0,87,1143	0/0:32,0:32:96.31:0,96,1261	0/0:25,0:25:75.24:0,75,987	0/0:21,0:21:54.18:0,54,711	0/0:25,0:25:75.23:0,75,972	0/0:13,0:13:33.11:0,33,429	0/0:24,0:24:63.20:0,63,827	0/0:23,0:23:61.43:0,61,779	0/0:40,0:40:99:0,108,1420	0/0:33,0:33:96.31:0,96,1262	0/0:30,0:30:69.22:0,69,897	0/0:32,1:33:64.03:0,64,1158	1/1:0,30:30:75.18:803,75,0	0/0:26,0:26:72.23:0,72,935	0/0:30,0:30:84.25:0,84,1079	0/0:11,0:11:33.06:0,33,388
chr10	9701542	.	GA	G	7346.66	PASS	AB=0.578;AC=51;AF=0.911;AN=56;BaseQRankSum=-1.488;DP=617;FS=0.882;HRun=14;HaplotypeScore=87.2408;InbreedingCoeff=0.6387;MQ=80.34;MQ0=0;MQRankSum=-0.009;QD=12.84;ReadPosRankSum=2.804;VQSLOD=4.9698;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,26:30:76.41:519,76,0	1/1:4,13:19:11.93:210,12,0	0/0:27,0:24:7.54:0,8,137	0/0:18,0:13:5.62:0,6,55	1/1:9,18:27:50.35:348,50,0	1/1:2,20:24:57.63:381,58,0	1/1:1,15:16:44.64:308,45,0	1/1:3,19:22:50.50:348,51,0	1/1:4,19:23:47.50:324,48,0	1/1:12,13:26:14.82:230,15,0	1/1:5,6:14:14.85:76,15,0	1/1:2,16:21:47.75:305,48,0	1/1:7,17:24:41.53:288,42,0	1/1:2,9:11:20.78:144,21,0	1/1:3,21:24:16.76:260,17,0	1/1:7,14:21:41.62:288,42,0	1/1:3,23:26:40.60:424,41,0	1/1:10,5:17:18.78:114,19,0	1/1:1,16:18:49.55:333,50,0	1/1:6,19:26:49.46:334,49,0	1/1:3,20:23:47.84:396,48,0	1/1:3,10:16:32.88:203,33,0	1/1:7,12:19:29.61:205,30,0	1/1:7,19:26:41.50:288,41,0	1/1:4,22:26:41.86:372,42,0	1/1:9,16:25:17.13:240,17,0	0/1:7,19:26:14.18:205,0,14	1/1:10,11:22:9.83:204,10,0
chr10	9704443	.	T	TTCTTTCTTTCTCTCTC	6565.92	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=3.415;DP=746;FS=9.763;HRun=0;HaplotypeScore=266.0103;InbreedingCoeff=0.9524;MQ=52.49;MQ0=7;MQRankSum=-8.800;QD=29.05;ReadPosRankSum=-1.214;VQSLOD=2.3532;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:26:29.77:873,30,0	0/0:10,0:10:27.07:0,27,646	0/0:34,0:21:45.94:0,46,751	0/0:17,0:10:11.80:0,12,136	1/1:6,21:36:23.78:663,24,0	1/1:2,21:31:2.19:467,2,0	1/1:24,0:24:39.10:1142,39,0	0/0:34,0:32:75.91:0,76,1444	0/0:21,0:21:60.16:0,60,1928	0/0:40,0:40:99:0,99,2979	0/0:20,0:20:51.14:0,51,1714	0/0:28,0:28:78.24:0,78,2837	0/0:31,0:31:84.21:0,84,2605	0/0:17,0:17:42.13:0,42,1475	0/0:24,0:24:69.18:0,69,2048	0/0:27,0:27:63.17:0,63,1823	0/0:24,0:24:59.94:0,60,1459	0/0:35,0:35:99:0,99,3353	1/1:20,0:19:32.97:517,33,0	1/1:35,0:35:72.14:1684,72,0	1/1:7,0:7:12.04:261,12,0	0/0:27,0:27:75.03:0,75,2157	0/0:24,0:24:66.16:0,66,1880	0/0:23,0:22:61.60:0,62,1963	1/1:10,28:47:15.05:959,15,0	0/0:32,0:32:87.18:0,87,2198	0/0:33,0:33:78.20:0,78,2286	0/0:19,0:18:45.15:0,45,1811
chr10	9704451	.	T	TTCTCTCTC	2263.06	PASS	AB=0.873;AC=7;AF=0.125;AN=56;BaseQRankSum=4.218;DP=737;FS=7.059;HRun=0;HaplotypeScore=178.4275;InbreedingCoeff=-0.1444;MQ=54.90;MQ0=8;MQRankSum=-7.260;QD=11.55;ReadPosRankSum=-1.003;VQSLOD=2.1365;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:10,13:25:99:246,0,275	0/0:12,0:12:30.10:0,30,797	0/0:36,0:22:56.12:0,56,1025	0/0:29,0:15:21.54:0,22,425	0/1:28,0:28:99:347,0,296	0/1:26,0:26:48.83:214,0,49	0/1:21,0:21:99:525,0,267	0/0:33,0:31:88.44:0,88,1849	0/0:23,0:23:69.17:0,69,1605	0/0:39,0:39:99:0,105,2688	0/0:20,0:20:57.15:0,57,1479	0/0:28,0:28:84.27:0,84,2209	0/0:32,0:32:90.28:0,90,2165	0/0:18,0:18:49.40:0,49,1215	0/0:24,0:24:72.23:0,72,1818	0/0:22,0:22:63.20:0,63,1581	0/0:26,0:26:75.11:0,75,1624	0/0:40,0:40:99:0,115,2695	0/1:13,3:19:99:298,0,384	0/1:23,10:35:99:268,0,915	0/0:7,0:7:12.03:0,12,203	0/0:28,0:28:81.10:0,81,2021	0/0:27,0:27:78.24:0,78,1869	0/0:24,0:23:62.56:0,63,1575	0/1:41,0:41:99:496,0,155	0/0:30,0:30:90.29:0,90,2259	0/0:26,0:26:78.24:0,78,1984	0/0:16,0:16:48.16:0,48,1293
chr10	9706867	.	GC	G	6805.06	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=12.888;DP=693;FS=4.038;HRun=5;HaplotypeScore=68.5117;InbreedingCoeff=0.9993;MQ=78.22;MQ0=0;MQRankSum=-1.355;QD=30.52;ReadPosRankSum=-1.029;VQSLOD=5.1166;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,38:39:99:1157,102,0	0/0:13,0:13:36.10:0,36,466	0/0:16,0:16:25.61:0,26,411	0/0:19,0:19:23.54:0,24,435	1/1:2,24:26:66.19:748,66,0	1/1:0,19:19:54.15:613,54,0	1/1:3,14:17:42.12:476,42,0	0/0:31,0:31:84.25:0,84,1106	0/0:23,0:23:66.22:0,66,903	0/0:29,0:29:84.27:0,84,1135	0/0:24,0:24:69.23:0,69,938	0/0:22,0:22:66.19:0,66,857	0/0:31,0:31:90.28:0,90,1212	0/0:22,0:22:63.21:0,63,860	0/0:30,0:30:81.26:0,81,1092	0/0:28,0:28:84.28:0,84,1149	0/0:27,0:27:75.25:0,75,1026	0/0:20,0:20:51.14:0,51,678	1/1:0,28:28:84.24:953,84,0	1/1:0,34:34:96.27:1089,96,0	1/1:0,24:24:66.19:749,66,0	0/0:12,0:12:36.12:0,36,491	0/0:21,0:21:63.21:0,63,855	0/0:21,0:21:57.19:0,57,779	1/1:1,35:36:90.26:1021,90,0	0/0:23,0:23:66.22:0,66,898	0/0:30,0:29:84.28:0,84,1149	0/0:28,0:28:84.26:0,84,1131
chr10	9708129	.	T	TA	5034.45	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-10.070;DP=538;FS=0.820;HRun=2;HaplotypeScore=55.6957;InbreedingCoeff=0.9975;MQ=72.74;MQ0=0;MQRankSum=-0.703;QD=31.08;ReadPosRankSum=-0.155;VQSLOD=4.2297;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,27:33:77.55:980,78,0	0/0:10,0:10:30.08:0,30,360	0/0:11,0:11:19.23:0,19,243	0/0:7,0:7:19.26:0,19,158	1/1:0,16:16:47.84:499,48,0	1/1:1,22:23:63.21:840,63,0	1/1:3,16:19:52.40:659,52,0	0/0:35,0:35:96.20:0,96,1060	0/0:21,0:21:54.16:0,54,654	0/0:19,0:19:53.97:0,54,553	0/0:13,0:13:39.04:0,39,456	0/0:16,0:16:45.04:0,45,522	0/0:19,0:19:54.13:0,54,624	0/0:14,0:14:39.10:0,39,458	0/0:29,0:29:73.46:0,73,956	0/0:13,0:13:39.11:0,39,471	0/0:26,0:26:66.03:0,66,761	0/0:29,0:29:81.19:0,81,957	1/1:1,16:17:48.12:587,48,0	1/1:0,17:17:45.01:536,45,0	1/1:1,10:11:24.04:301,24,0	0/0:16,0:16:39.07:0,39,453	0/0:18,0:18:51.08:0,51,555	0/0:20,0:19:60.19:0,60,740	1/1:5,21:26:43.32:633,43,0	0/0:19,0:19:57.16:0,57,680	0/0:27,0:27:78.16:0,78,907	0/0:14,0:14:42.01:0,42,455
chr10	9708379	.	C	CATGAGTGTGTGTGT	2162.27	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=3.379;DP=610;FS=2.589;HRun=0;HaplotypeScore=206.8762;InbreedingCoeff=0.7811;MQ=58.15;MQ0=6;MQRankSum=-3.175;QD=13.60;ReadPosRankSum=-5.885;VQSLOD=0.9188;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:9,8:28:1.37:0,1,3	0/0:11,0:10:33.11:0,33,873	0/0:34,0:12:26.16:0,26,249	0/0:41,0:15:16.20:0,16,493	1/1:14,0:13:19.13:188,19,0	1/1:3,13:27:0.29:50,0,0	1/1:21,0:20:29.39:332,29,0	0/0:30,0:30:81.02:0,81,1371	0/0:22,0:21:60.09:0,60,1736	0/0:20,0:20:56.88:0,57,1454	0/0:13,0:13:39.05:0,39,942	0/0:25,0:25:75.08:0,75,2349	0/0:23,0:23:69.22:0,69,2574	0/0:16,0:16:44.93:0,45,1396	0/0:23,0:23:59.17:0,59,1795	0/1:18,0:18:29.05:29,0,1299	0/0:23,0:23:64.82:0,65,1941	0/0:17,0:17:4.50:0,5,1488	1/1:20,0:20:23.57:650,24,0	1/1:9,0:9:6.01:217,6,0	1/1:31,0:31:22.33:275,22,0	0/0:18,0:17:51.08:0,51,1748	0/0:15,0:15:44.40:0,44,1365	0/0:31,0:31:80.85:0,81,1468	1/1:0,11:19:9.03:603,9,0	0/0:24,0:24:63.04:0,63,1531	0/0:30,0:30:89.79:0,90,2342	0/0:7,0:7:21.05:0,21,621
chr10	9708771	.	GAAGGATAAA	G	9123	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=14.422;DP=618;FS=10.049;HRun=0;HaplotypeScore=175.2194;InbreedingCoeff=0.9926;MQ=86.44;MQ0=1;MQRankSum=-13.683;QD=62.06;ReadPosRankSum=0.051;VQSLOD=4.1242;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,19:21:39.13:1231,39,0	0/0:16,0:16:48.16:0,48,2297	0/0:21,0:20:60.19:0,60,2700	0/0:29,0:29:59.88:0,60,3039	1/1:0,16:16:29.73:947,30,0	1/1:0,16:16:45.15:1421,45,0	1/1:4,17:21:42.14:1327,42,0	0/0:32,0:32:93.31:0,93,4325	0/0:23,0:23:69.24:0,69,3416	0/0:23,0:23:69.24:0,69,3416	0/0:29,0:29:87.30:0,87,4091	0/0:21,0:21:57.18:0,57,2699	0/0:28,0:28:81.28:0,81,3846	0/0:18,0:18:54.19:0,54,2681	0/0:24,0:24:69.24:0,69,3214	0/0:30,0:30:87.30:0,87,4194	0/0:27,0:27:81.24:0,81,3847	0/0:12,0:12:36.11:0,36,1577	1/1:2,17:18:48.09:1169,48,0	1/1:0,23:23:51.13:1536,51,0	1/1:4,10:14:11.40:355,11,0	0/0:25,0:25:75.26:0,75,3539	0/0:27,0:27:81.28:0,81,3837	0/0:15,0:15:45.11:0,45,2006	1/1:1,16:17:36.12:1137,36,0	0/0:23,0:23:69.22:0,69,3258	0/0:42,0:41:99:0,126,6074	0/0:6,0:6:18.06:0,18,893
chr10	9715190	.	ATT	A	393.07	PASS	AC=8;AF=0.80;AN=10;BaseQRankSum=0.401;DP=135;FS=0.000;HRun=2;HaplotypeScore=30.1554;MQ=23.80;MQ0=117;MQRankSum=-1.737;QD=19.65;ReadPosRankSum=0.668;VQSLOD=1.2226;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	0/0:10,0:1:3.01:0,3,59	1/1:1,6:6:12.04:152,12,0	./.	1/1:5,1:1:3.01:39,3,0	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	1/1:1,4:5:15.05:192,15,0	./.	./.	./.	./.	1/1:0,2:2:6.02:87,6,0	./.	./.	./.
chr10	9719458	.	G	GTGAGGCTCACT	21472.27	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=0.006;DP=698;FS=22.562;HRun=0;HaplotypeScore=217.4642;InbreedingCoeff=0.9151;MQ=76.80;MQ0=0;MQRankSum=-16.741;QD=95.43;ReadPosRankSum=-3.012;VQSLOD=3.0005;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,14:26:57.15:2731,57,0	0/0:6,0:6:15.03:0,15,447	0/0:20,0:20:44.35:0,44,1425	0/1:19,0:19:11.62:12,0,1006	1/1:13,21:38:83.74:3770,84,0	1/1:12,21:34:93.32:4705,93,0	1/1:8,1:14:24.04:821,24,0	0/0:44,0:44:99:0,126,4057	0/0:24,0:24:69.19:0,69,2178	0/0:50,0:50:99:0,135,4587	0/0:16,0:16:42.14:0,42,1440	0/0:24,0:24:60.21:0,60,1968	0/0:26,0:26:72.25:0,72,2452	0/0:26,0:26:72.23:0,72,2451	0/0:29,0:29:81.26:0,81,2593	0/0:27,0:27:78.27:0,78,2601	0/0:26,0:26:75.26:0,75,2442	0/0:16,0:16:26.31:0,26,1312	1/1:9,4:16:39.11:1553,39,0	1/1:14,19:37:90.14:4054,90,0	1/1:6,4:14:15.05:856,15,0	0/0:34,0:34:99:0,99,3432	0/0:31,0:31:90.31:0,90,2963	0/0:20,0:20:57.20:0,57,1945	1/1:11,13:26:66.10:2970,66,0	0/0:16,0:16:48.16:0,48,1590	0/0:26,0:26:75.26:0,75,2546	0/0:12,0:12:36.12:0,36,1269
chr10	9720165	.	T	TGATGGATG	18059.76	PASS	AC=52;AF=1.000;AN=52;BaseQRankSum=-1.644;DP=798;FS=0.000;HRun=0;HaplotypeScore=207.3508;InbreedingCoeff=0.3130;MQ=65.67;MQ0=10;MQRankSum=-0.177;QD=25.01;ReadPosRankSum=0.760;VQSLOD=3.7202;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,0:34:24.46:624,24,0	1/1:9,5:15:18.06:731,18,0	./.	./.	1/1:1,0:22:0.16:1,0,0	1/1:4,0:24:18.49:477,18,0	1/1:5,0:25:17.69:402,18,0	1/1:39,0:39:16.78:217,17,0	1/1:18,12:32:51.18:1869,51,0	1/1:26,6:35:46.38:1373,46,0	1/1:20,4:25:11.75:356,12,0	1/1:20,7:28:18.06:633,18,0	1/1:26,11:38:27.09:1037,27,0	1/1:18,14:33:33.11:1251,33,0	1/1:20,10:31:24.08:850,24,0	1/1:24,9:34:24.08:904,24,0	1/1:28,0:27:15.49:382,15,0	1/1:19,1:20:15.05:549,15,0	1/1:3,0:12:6.96:216,7,0	1/1:4,0:20:18.06:624,18,0	1/1:4,0:44:9.03:200,9,0	1/1:21,4:29:9.03:321,9,0	1/1:22,6:29:18.06:527,18,0	1/1:16,4:22:7.84:248,8,0	1/1:8,0:29:33.11:972,33,0	1/1:16,13:33:54.18:1810,54,0	1/1:12,10:23:24.08:958,24,0	1/1:9,8:17:15.05:528,15,0
chr10	9721158	.	TAC	T	1462.31	PASS	AB=0.797;AC=37;AF=0.771;AN=48;BaseQRankSum=3.129;DP=430;FS=0.000;HRun=0;HaplotypeScore=60.3765;InbreedingCoeff=0.0540;MQ=59.30;MQ0=10;MQRankSum=1.398;QD=4.73;ReadPosRankSum=0.952;VQSLOD=2.2282;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:20:5.42:28,5,0	1/1:6,1:7:3.01:32,3,0	./.	./.	1/1:12,0:19:8.52:42,9,0	1/1:7,0:10:17.25:96,17,0	1/1:8,0:18:11.36:56,11,0	0/0:29,0:28:1.77:0,2,4	1/1:10,0:11:9.57:60,10,0	0/0:9,0:8:0:0,0,0	./.	0/1:12,3:15:18.75:148,0,19	1/1:8,5:13:8.86:79,9,0	1/1:6,0:6:3:32,3,0	1/1:9,4:15:14.54:107,15,0	0/1:6,8:14:8.11:114,0,8	1/1:11,11:24:5.91:189,6,0	1/1:11,4:15:6.01:65,6,0	./.	0/1:14,2:16:51.07:51,0,85	0/0:9,0:9:6.02:0,6,88	1/1:12,1:13:9.01:91,9,0	1/1:13,6:19:9.02:97,9,0	0/1:16,11:26:19.19:85,0,19	1/1:11,0:13:11.36:56,11,0	1/1:12,0:12:2.92:32,3,0	1/1:9,0:9:6:53,6,0	0/1:10,1:11:23.39:76,0,23
chr10	9722286	.	A	AG	119.62	PASS	AB=0.806;AC=5;AF=0.089;AN=56;BaseQRankSum=6.884;DP=291;FS=20.730;HRun=0;HaplotypeScore=42.9127;InbreedingCoeff=-0.0607;MQ=73.89;MQ0=2;MQRankSum=0.496;QD=1.79;ReadPosRankSum=2.233;VQSLOD=0.3379;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:1:0,1,93	0/0:5,0:5:15.05:0,15,209	0/0:6,0:6:15.05:0,15,209	0/0:6,0:6:9.82:0,10,163	0/1:10,2:12:26.54:27,0,83	0/1:10,5:15:79.91:101,0,80	0/0:2,0:2:2.74:0,3,12	0/0:26,0:24:52.24:0,52,935	0/0:5,0:5:15.05:0,15,209	0/0:20,0:20:51.86:0,52,749	0/0:8,0:8:21.07:0,21,292	0/0:2,0:2:6.02:0,6,84	0/0:8,0:8:24.05:0,24,299	0/0:10,0:10:27.07:0,27,359	0/0:8,0:8:24.08:0,24,335	0/0:4,0:4:9.03:0,9,126	0/0:25,0:25:75.24:0,75,1030	0/0:18,0:18:49.72:0,50,705	0/1:17,2:19:23.19:23,0,94	0/0:10,1:11:4.06:0,4,126	0/1:2,2:4:4.81:46,0,5	0/0:3,0:3:6.02:0,6,84	0/0:6,0:6:18.06:0,18,251	0/0:2,0:2:6.02:0,6,84	0/1:14,3:17:37.44:37,0,131	0/0:8,0:8:24.07:0,24,320	0/0:21,0:21:60.19:0,60,817	0/0:9,0:9:27.09:0,27,378
chr10	9722287	.	A	ATAG	1026.61	PASS	AB=0.833;AC=12;AF=0.214;AN=56;BaseQRankSum=10.811;DP=290;FS=4.392;HRun=0;HaplotypeScore=51.8783;InbreedingCoeff=0.6498;MQ=74.00;MQ0=2;MQRankSum=-0.716;QD=12.83;ReadPosRankSum=2.079;VQSLOD=2.8183;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:2.55:0,3,35	0/0:5,0:5:15.04:0,15,240	0/0:6,0:6:18.01:0,18,238	0/0:6,0:6:14.98:0,15,210	1/1:10,2:12:9.97:181,10,0	0/1:10,5:15:0.82:326,0,1	1/1:2,0:2:1.55:4,2,0	0/0:25,0:23:69.21:0,69,1209	0/0:5,0:5:15.05:0,15,279	0/0:20,0:20:57.17:0,57,950	0/0:8,0:8:24.07:0,24,410	0/0:2,0:2:6.02:0,6,112	0/0:8,0:8:24.06:0,24,386	0/0:10,0:10:30.08:0,30,494	0/0:8,0:8:24.08:0,24,441	0/0:4,0:4:12.03:0,12,193	0/0:25,0:25:75.23:0,75,1308	0/0:18,0:18:53.52:0,54,899	1/1:17,2:19:21.24:247,21,0	0/1:10,1:11:26.57:97,0,27	1/1:2,2:4:10.83:137,11,0	0/0:3,0:3:9.02:0,9,137	0/0:6,0:6:18.06:0,18,326	0/0:2,0:2:6.02:0,6,111	1/1:14,3:17:4.66:189,5,0	0/0:8,0:8:24.07:0,24,387	0/0:21,0:21:63.08:0,63,864	0/0:9,0:9:27.09:0,27,464
chr10	9724141	.	A	AGT	12040.10	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-9.339;DP=707;FS=0.296;HRun=0;HaplotypeScore=86.0713;InbreedingCoeff=0.9996;MQ=74.99;MQ0=0;MQRankSum=-1.741;QD=48.35;ReadPosRankSum=0.549;VQSLOD=5.9182;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,41:44:99:1969,108,0	0/0:17,0:17:51.17:0,51,729	0/0:32,0:30:50.30:0,50,850	0/0:17,0:18:23.13:0,23,507	1/1:1,23:24:63.22:1154,63,0	1/1:2,18:20:54.19:990,54,0	1/1:3,34:37:87.30:1595,87,0	0/0:30,0:30:75.25:0,75,1074	0/0:16,0:16:48.16:0,48,688	0/0:22,0:22:63.21:0,63,888	0/0:16,0:16:39.13:0,39,559	0/0:30,0:30:90.30:0,90,1288	0/0:20,0:20:60.20:0,60,853	0/0:29,0:29:81.26:0,81,1142	0/0:29,0:29:84.28:0,84,1201	0/0:23,0:23:60.20:0,60,859	0/0:17,0:17:45.15:0,45,645	0/0:22,0:22:66.22:0,66,942	1/1:3,20:22:66.23:1169,66,0	1/1:0,29:30:81.28:1481,81,0	1/1:3,42:45:99:2255,123,0	0/0:19,0:19:51.17:0,51,729	0/0:17,0:17:48.15:0,48,666	0/0:32,0:32:90.29:0,90,1269	1/1:1,25:26:78.27:1428,78,0	0/0:25,0:25:72.24:0,72,1031	0/0:21,0:21:60.18:0,60,841	0/0:22,0:22:60.20:0,60,858
chr10	9725197	.	TAC	T	1650.40	PASS	AB=0.785;AC=28;AF=0.538;AN=52;BaseQRankSum=-0.638;DP=641;FS=14.703;HRun=0;HaplotypeScore=89.6780;InbreedingCoeff=0.3667;MQ=69.15;MQ0=10;MQRankSum=2.190;QD=5.14;ReadPosRankSum=2.793;VQSLOD=1.4198;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:36.04:0,36,376	0/1:4,8:13:20.04:155,0,20	./.	./.	0/0:17,0:27:6.01:0,6,69	0/0:15,0:24:3:0,3,26	0/0:15,0:25:8.99:0,9,75	0/0:35,0:35:2.98:0,3,21	0/1:14,8:22:1.90:144,0,2	1/1:15,0:15:6.01:60,6,0	1/1:10,1:11:3.01:32,3,0	1/1:18,10:29:17.61:155,18,0	0/1:18,3:21:35.41:56,0,35	1/1:9,4:13:6.01:65,6,0	1/1:17,12:27:3.07:176,3,0	1/1:7,13:20:24.06:259,24,0	1/1:20,3:26:23.02:185,23,0	1/1:9,4:13:11.04:128,11,0	0/0:17,0:17:20.97:0,21,194	0/0:17,0:17:5.67:0,6,49	0/0:27,0:47:11.98:0,12,98	1/1:13,1:16:9.16:61,9,0	0/1:12,3:15:2.35:33,0,2	0/1:29,3:32:40.75:41,0,223	0/0:14,0:24:5.99:0,6,51	1/1:17,7:24:9:88,9,0	0/1:11,4:16:47.82:93,0,48	1/1:1,2:5:11.70:93,12,0
chr10	9725801	.	G	GTGGGTA	14739.22	PASS	AB=0.645;AC=15;AF=0.268;AN=56;BaseQRankSum=7.487;DP=783;FS=0.331;HRun=0;HaplotypeScore=173.4672;InbreedingCoeff=0.8617;MQ=59.07;MQ0=1;MQRankSum=-17.661;QD=62.19;ReadPosRankSum=-1.772;VQSLOD=4.2346;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,31:40:42.35:2653,42,0	0/0:16,0:16:48.14:0,48,1029	0/0:23,0:20:39.65:0,40,872	0/0:27,0:25:57.20:0,57,1225	1/1:12,25:38:56.67:1976,57,0	1/1:11,24:36:75.26:2304,75,0	1/1:14,14:29:54.18:1670,54,0	0/0:46,0:46:99:0,120,2569	0/0:24,0:24:66.21:0,66,1436	0/0:30,0:30:78.24:0,78,1693	0/0:27,0:27:72.25:0,72,1591	0/0:28,0:28:78.25:0,78,1728	0/0:26,0:26:75.26:0,75,1687	0/0:18,0:18:48.12:0,48,958	0/0:26,0:26:75.24:0,75,1649	0/0:28,0:28:78.26:0,78,1737	0/0:38,0:38:99:0,102,2323	0/0:17,0:17:48.12:0,48,1045	1/1:19,8:28:0.71:1964,1,0	1/1:10,7:19:30.10:910,30,0	0/1:9,10:20:38.79:1175,0,39	0/0:31,0:31:84.28:0,84,1849	0/0:29,0:29:84.29:0,84,1915	0/0:48,0:48:99:0,129,2914	1/1:9,17:27:63.22:2088,63,0	0/0:35,0:35:99:0,102,2287	0/0:22,0:22:63.19:0,63,1328	0/0:7,0:7:15.05:0,15,343
chr10	9726820	.	GGGGT	G	7093.78	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=12.578;DP=520;FS=20.430;HRun=0;HaplotypeScore=93.3668;InbreedingCoeff=0.9947;MQ=85.80;MQ0=0;MQRankSum=-4.537;QD=46.67;ReadPosRankSum=2.487;VQSLOD=3.7731;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,22:22:60.21:1138,60,0	0/0:10,0:10:30.10:0,30,779	0/0:20,0:20:60.12:0,60,1325	0/0:23,0:23:55.04:0,55,1215	1/1:0,24:24:54.19:1024,54,0	1/1:0,18:18:42.14:796,42,0	1/1:2,19:21:39.13:740,39,0	0/0:19,0:19:51.17:0,51,1274	0/0:18,0:18:54.19:0,54,1367	0/0:18,0:18:51.17:0,51,1261	0/0:12,0:12:36.11:0,36,862	0/0:13,0:13:39.12:0,39,947	0/0:13,0:13:39.13:0,39,1009	0/0:18,0:18:54.16:0,54,1308	0/0:21,0:21:63.22:0,63,1612	0/0:22,0:22:63.21:0,63,1637	0/0:31,0:31:93.32:0,93,2361	0/0:24,0:24:69.22:0,69,1709	1/1:0,16:16:48.15:870,48,0	1/1:0,16:16:45.11:817,45,0	1/1:0,21:21:48.16:911,48,0	0/0:19,0:19:53.35:0,53,1348	0/0:18,0:18:51.18:0,51,1284	0/0:27,0:27:78.19:0,78,1904	1/1:0,14:14:42.14:797,42,0	0/0:20,0:20:60.21:0,60,1559	0/0:18,0:17:54.19:0,54,1381	0/0:4,0:4:12.04:0,12,312
chr10	9730206	.	C	CTTG	783.42	PASS	AB=0.726;AC=12;AF=0.214;AN=56;BaseQRankSum=1.111;DP=340;FS=24.554;HRun=0;HaplotypeScore=72.7223;InbreedingCoeff=0.4215;MQ=54.86;MQ0=6;MQRankSum=-1.794;QD=6.70;ReadPosRankSum=-1.480;VQSLOD=0.6906;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:1,14:17:6.02:94,6,0	0/0:4,0:4:9.02:0,9,130	0/0:16,0:7:17.89:0,18,248	0/0:14,0:12:27.85:0,28,438	0/1:4,9:15:49.02:82,0,49	1/1:4,0:4:12.04:180,12,0	1/1:1,12:14:3.01:72,3,0	0/0:12,0:10:30.09:0,30,481	0/0:9,0:9:27.09:0,27,494	0/0:12,0:12:30.10:0,30,549	0/0:9,0:9:21.07:0,21,367	0/0:9,0:9:27.06:0,27,417	0/0:15,0:15:43.44:0,43,692	0/0:17,0:17:48.61:0,49,799	0/0:17,0:17:51.16:0,51,857	0/0:12,0:11:33.10:0,33,583	0/0:6,0:6:18.06:0,18,313	0/0:6,0:4:9.03:0,9,153	0/1:19,6:24:99:248,0,400	1/1:0,5:6:2.97:20,3,0	0/1:14,0:14:46.62:165,0,47	0/0:13,0:13:32.96:0,33,502	0/0:11,0:11:20.70:0,21,310	0/0:13,0:13:30.06:0,30,510	0/1:3,17:21:14.39:77,0,14	0/0:16,0:15:43.03:0,43,761	0/0:9,0:9:27.08:0,27,464	0/0:3,0:3:9.03:0,9,167
chr10	9730425	.	TTCC	T	302.60	PASS	AB=0.975;AC=23;AF=0.479;AN=48;BaseQRankSum=0.786;DP=290;FS=12.041;HRun=0;HaplotypeScore=42.2821;InbreedingCoeff=0.0133;MQ=20.55;MQ0=72;MQRankSum=-1.256;QD=1.94;ReadPosRankSum=0.763;VQSLOD=0.0301;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:21,0:20:1.02:1,0,39	1/1:3,0:1:2.88:15,3,0	./.	./.	1/1:7,0:6:2.77:15,3,0	0/1:12,0:8:12.32:12,0,14	0/1:15,0:8:5.84:6,0,41	0/0:14,0:8:0:0,0,0	0/0:8,0:5:4.52:0,5,24	0/1:10,1:8:9.37:77,0,9	0/0:7,0:3:0:0,0,0	0/1:5,1:4:3.02:30,0,3	./.	1/1:5,1:4:3.01:32,3,0	0/0:4,0:3:0:0,0,0	0/0:6,0:4:3.01:0,3,33	1/1:10,2:6:1.02:33,1,0	0/0:6,0:4:3.44:0,3,21	0/1:8,0:6:0.03:0,0,0	1/1:8,0:5:0.69:1,1,0	1/1:13,0:6:2.15:16,2,0	1/1:7,1:7:5.95:71,6,0	0/1:5,0:4:5.37:30,0,5	0/0:7,1:7:0:0,0,0	0/1:8,0:7:11.35:11,0,18	0/1:13,0:8:30.58:63,0,31	0/0:1,0:1:0.47:0,0,1	./.
chr10	9731307	.	GTT	G	1748.38	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=12.504;DP=739;FS=3.256;HRun=3;HaplotypeScore=131.2376;InbreedingCoeff=0.9824;MQ=62.29;MQ0=8;MQRankSum=0.229;QD=8.37;ReadPosRankSum=-1.469;VQSLOD=-0.0505;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:27:21.10:169,21,0	0/0:14,0:14:41.17:0,41,734	0/0:28,0:11:30.10:0,30,545	0/0:35,0:21:50.78:0,51,865	1/1:31,3:31:48.75:387,49,0	1/1:20,2:21:11.11:190,11,0	1/1:28,2:28:30.32:325,30,0	0/0:27,0:27:81.26:0,81,1447	0/0:35,0:35:99:0,105,1882	0/0:34,0:34:99:0,99,1746	0/0:23,0:23:69.16:0,69,1186	0/0:35,0:35:99:0,99,1743	0/0:37,0:37:99:0,108,1883	0/0:33,0:33:96.19:0,96,1610	0/0:27,0:27:78.27:0,78,1482	0/0:36,0:35:99:0,102,1803	0/0:15,0:15:45.15:0,45,852	0/0:20,0:18:51.17:0,51,937	1/1:25,1:25:40.58:332,41,0	1/1:25,4:29:26.70:232,27,0	1/1:16,0:16:21.86:177,22,0	0/0:21,0:21:60.20:0,60,1114	0/0:16,0:16:48.16:0,48,888	0/0:29,0:28:81.27:0,81,1500	1/1:22,2:23:9.10:141,9,0	0/0:23,0:23:69.22:0,69,1207	0/0:30,0:30:87.27:0,87,1592	0/0:12,0:12:36.11:0,36,662
chr10	9731504	.	TC	T	7082.45	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=13.887;DP=776;FS=6.620;HRun=5;HaplotypeScore=98.6120;InbreedingCoeff=0.9982;MQ=76.99;MQ0=0;MQRankSum=-1.995;QD=29.03;ReadPosRankSum=0.920;VQSLOD=4.7290;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,54:57:99:1517,135,0	0/0:15,0:15:17.68:0,18,509	0/0:20,0:20:51.07:0,51,640	0/0:16,0:16:38.99:0,39,474	1/1:1,27:28:78.22:884,78,0	1/1:1,24:25:63.18:714,63,0	1/1:2,26:28:69.20:783,69,0	0/0:40,0:40:99:0,111,1488	0/0:26,0:26:63.21:0,63,861	0/0:46,0:46:99:0,132,1753	0/0:32,0:32:93.29:0,93,1252	0/0:27,0:27:75.25:0,75,1025	0/0:28,0:28:81.27:0,81,1106	0/0:35,0:35:90.30:0,90,1220	0/0:32,0:32:90.27:0,90,1198	0/0:34,0:34:99:0,99,1354	0/0:21,0:21:54.15:0,54,717	0/0:14,0:14:39.13:0,39,533	1/1:2,19:20:54.12:599,54,0	1/1:1,22:23:54.15:612,54,0	1/1:2,38:40:99:1259,111,0	0/0:36,0:36:99:0,105,1429	0/0:20,0:20:57.19:0,57,778	0/0:26,0:26:75.25:0,75,1025	1/1:0,22:22:63.18:715,63,0	0/0:30,0:30:90.28:0,90,1213	0/0:24,0:24:69.23:0,69,940	0/0:10,0:10:24.08:0,24,328
chr10	9732293	.	GCACACACACA	G	2969.87	PASS	AC=16;AF=0.308;AN=52;BaseQRankSum=7.770;DP=617;FS=0.675;HRun=0;HaplotypeScore=180.1166;InbreedingCoeff=0.9194;MQ=68.19;MQ0=6;MQRankSum=-6.778;QD=17.17;ReadPosRankSum=-1.311;VQSLOD=2.4353;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:26,6:31:11.71:278,12,0	0/0:13,0:15:27.09:0,27,1063	./.	./.	1/1:14,12:26:29.94:700,30,0	1/1:14,6:21:15.52:428,16,0	1/1:17,5:22:15.05:432,15,0	0/0:21,0:20:18.06:0,18,797	0/0:19,0:20:39.13:0,39,1522	0/0:26,0:25:42.62:0,43,1770	0/0:17,0:18:33.11:0,33,1244	0/0:22,0:24:45.15:0,45,1791	0/0:11,0:25:29.99:0,30,1255	0/0:24,0:26:33.84:0,34,1257	0/0:22,0:22:45.15:0,45,1805	0/0:18,0:21:36.09:0,36,1250	0/0:20,0:22:42.14:0,42,1672	0/0:20,0:22:51.15:0,51,1830	1/1:15,0:15:2.79:55,3,0	1/1:11,6:18:27.09:727,27,0	1/1:19,5:24:3.01:90,3,0	0/0:20,0:20:45.15:0,45,1857	0/0:20,0:24:35.06:0,35,1237	0/0:32,0:35:66.20:0,66,2779	1/1:9,5:15:18.02:448,18,0	0/0:22,0:25:51.18:0,51,1909	0/0:18,0:20:36.12:0,36,1481	0/0:7,0:9:15.05:0,15,564
chr10	9733152	.	G	GA	6318.62	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-8.389;DP=730;FS=1.025;HRun=7;HaplotypeScore=69.0120;InbreedingCoeff=0.9921;MQ=84.11;MQ0=0;MQRankSum=-0.877;QD=28.08;ReadPosRankSum=0.363;VQSLOD=5.4573;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,47:48:99:1631,135,0	0/0:16,0:16:45.07:0,45,434	0/0:23,0:23:50.98:0,51,472	0/0:21,0:21:28.87:0,29,251	1/1:6,28:34:72.14:837,72,0	1/1:5,21:26:57.17:688,57,0	1/1:5,15:20:10.14:406,10,0	0/0:34,0:34:84.12:0,84,807	0/0:30,0:30:78.12:0,78,753	0/0:28,0:28:72.10:0,72,691	0/0:27,0:27:75.12:0,75,724	0/0:29,0:29:84.13:0,84,811	0/0:19,0:19:48.07:0,48,464	0/0:27,0:27:66.08:0,66,626	0/0:39,0:39:99:0,105,997	0/0:27,0:27:78.12:0,78,753	0/0:22,0:22:54.08:0,54,522	0/0:24,0:24:63.10:0,63,608	1/1:6,19:25:57.16:675,57,0	1/1:4,27:31:78.09:879,78,0	1/1:3,22:25:31.21:660,31,0	0/0:15,0:15:42.07:0,42,405	0/0:23,0:23:63.09:0,63,607	0/0:22,0:22:63.07:0,63,601	1/1:0,16:16:45.14:544,45,0	0/0:35,0:35:99:0,99,955	0/0:25,0:24:66.08:0,66,631	0/0:19,0:19:48.06:0,48,457
chr10	9734332	.	A	ATT	7274.92	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-11.158;DP=694;FS=4.448;HRun=8;HaplotypeScore=84.6873;InbreedingCoeff=0.9995;MQ=82.77;MQ0=0;MQRankSum=-3.498;QD=35.14;ReadPosRankSum=-1.012;VQSLOD=4.6020;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,49:51:99:1913,123,0	0/0:14,0:14:36.07:0,36,383	0/0:27,0:27:65.79:0,66,703	0/0:18,0:18:38.70:0,39,386	1/1:3,15:22:52.49:637,52,0	1/1:2,17:21:54.18:838,54,0	1/1:9,14:25:50.13:693,50,0	0/0:27,0:26:66.09:0,66,700	0/0:23,0:23:66.15:0,66,726	0/0:28,0:28:75.20:0,75,836	0/0:18,0:18:54.13:0,54,593	0/0:21,0:22:59.90:0,60,647	0/0:20,0:20:51.13:0,51,568	0/0:25,0:25:72.19:0,72,803	0/0:32,0:33:86.93:0,87,939	0/0:43,0:43:99:0,126,1377	0/0:28,0:28:75.18:0,75,836	0/0:13,0:13:33.08:0,33,368	1/1:7,16:23:51.17:787,51,0	1/1:3,23:28:71.11:1008,71,0	1/1:2,8:10:24.08:381,24,0	0/0:21,0:21:60.15:0,60,669	0/0:14,0:14:33.06:0,33,368	0/0:36,0:36:96.19:0,96,1042	1/1:3,22:27:68.21:1017,68,0	0/0:37,0:37:99:0,102,1120	0/0:29,0:29:78.17:0,78,859	0/0:11,0:11:30.08:0,30,334
chr10	9735096	.	C	CT	1257.54	PASS	AB=0.739;AC=17;AF=0.315;AN=54;BaseQRankSum=3.230;DP=510;FS=0.619;HRun=8;HaplotypeScore=68.4911;InbreedingCoeff=0.8129;MQ=41.04;MQ0=70;MQRankSum=-2.819;QD=7.49;ReadPosRankSum=-0.302;VQSLOD=0.8683;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:31,7:26:28.88:267,29,0	0/0:5,0:5:10.77:0,11,106	1/1:3,0:2:0.47:1,0,0	./.	1/1:17,11:26:27.51:295,28,0	0/1:11,6:14:6.80:162,0,7	1/1:13,6:13:12.50:139,12,0	0/0:17,0:15:29.80:0,30,274	0/0:21,0:19:26.44:0,26,246	0/0:21,0:18:29.12:0,29,272	0/0:14,0:12:7.64:0,8,151	0/0:17,0:16:11.34:0,11,179	0/0:19,0:18:29.74:0,30,274	0/0:18,0:17:17.72:0,18,164	0/0:21,0:20:23.37:0,23,217	0/0:19,0:17:35.55:0,36,324	0/0:38,0:31:23.85:0,24,221	0/0:20,0:17:5.67:0,6,48	1/1:10,6:10:21.02:227,21,0	1/1:10,5:12:10.50:79,10,0	1/1:4,4:6:6.02:69,6,0	0/0:15,0:14:28.21:0,28,250	0/0:15,0:15:29.55:0,30,274	0/0:19,0:18:11.76:0,12,109	1/1:12,12:21:18.93:202,19,0	0/0:25,0:22:35.97:0,36,329	0/0:9,0:8:17.03:0,17,143	0/0:22,0:19:35.60:0,36,294
chr10	9735489	.	CGTGT	C	2164.48	PASS	AB=0.805;AC=29;AF=0.806;AN=36;BaseQRankSum=0.426;DP=495;FS=1.244;HRun=0;HaplotypeScore=93.3334;InbreedingCoeff=-0.1422;MQ=63.54;MQ0=14;MQRankSum=-1.929;QD=6.58;ReadPosRankSum=0.831;VQSLOD=2.2619;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:21:2.36:9,2,0	./.	./.	./.	./.	1/1:11,0:14:8.69:68,9,0	0/1:15,0:23:15.41:119,0,15	0/1:24,0:24:26.77:126,0,27	0/1:12,1:14:32.22:32,0,57	./.	1/1:13,2:14:6.02:87,6,0	1/1:19,6:26:12.03:166,12,0	1/1:10,1:13:9.02:102,9,0	1/1:10,5:15:9.03:139,9,0	1/1:15,2:20:12.02:149,12,0	1/1:6,11:18:27.09:402,27,0	1/1:18,4:21:14.08:193,14,0	1/1:14,5:21:1.22:153,1,0	./.	0/0:8,0:12:0:0,0,0	./.	1/1:9,0:11:2.83:28,3,0	./.	0/1:20,16:39:29.99:368,0,30	./.	1/1:7,0:9:2.29:6,2,0	0/1:14,4:19:21.43:125,0,21	./.
chr10	9736034	.	T	TAC	1658.78	PASS	AB=0.854;AC=26;AF=0.520;AN=50;BaseQRankSum=-5.289;DP=599;FS=1.874;HRun=0;HaplotypeScore=105.8403;InbreedingCoeff=-0.1654;MQ=62.57;MQ0=19;MQRankSum=2.275;QD=4.19;ReadPosRankSum=-0.604;VQSLOD=2.8284;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:26:8.40:0,8,42	1/1:7,1:9:3.01:44,3,0	./.	./.	0/1:13,0:13:0:0,0,0	0/0:21,0:21:11.36:0,11,56	0/1:32,0:32:4.71:5,0,18	1/1:26,0:26:6.01:29,6,0	0/1:10,4:15:52.43:77,0,52	0/1:13,1:14:16.84:77,0,17	1/1:10,2:13:6.02:89,6,0	1/1:18,3:21:6.49:90,6,0	0/1:14,6:23:20.20:121,0,20	0/1:8,4:12:23.21:79,0,23	1/1:14,7:23:9.03:133,9,0	0/1:17,3:20:8.17:240,0,8	0/1:24,0:24:15.37:140,0,15	0/1:16,3:21:99:103,0,100	0/0:10,0:9:5.68:0,6,28	0/0:13,0:13:11.24:0,11,56	./.	1/1:21,0:21:5.99:69,6,0	0/1:13,1:15:5.38:48,0,5	0/1:21,11:34:99:189,0,148	0/0:19,0:19:5.68:0,6,28	0/1:18,0:18:22.32:75,0,22	0/1:20,9:29:22.74:80,0,23	0/1:5,6:11:20.20:121,0,20
chr10	9736069	.	ACACACACACAC	A	1191.64	PASS	AB=0.972;AC=12;AF=0.214;AN=56;BaseQRankSum=8.153;DP=687;FS=2.456;HRun=0;HaplotypeScore=175.0707;InbreedingCoeff=0.7200;MQ=51.69;MQ0=54;MQRankSum=-7.112;QD=7.31;ReadPosRankSum=1.403;VQSLOD=2.8168;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:37,0:30:11.88:160,12,0	0/0:9,0:9:24.08:0,24,796	0/0:40,0:14:42.14:0,42,556	0/0:34,0:10:22.31:0,22,272	1/1:18,0:18:1.71:4,2,0	1/1:24,2:22:15.05:313,15,0	0/1:27,0:26:70.31:78,0,70	0/0:30,0:29:76.50:0,76,1550	0/0:17,0:17:36.59:0,37,1530	0/0:25,0:24:69.23:0,69,2165	0/0:16,0:15:33.57:0,34,1166	0/0:25,0:24:56.31:0,56,1849	0/0:23,0:22:39:0,39,1264	0/0:21,0:21:49.41:0,49,1219	0/0:25,0:25:45.15:0,45,1360	0/0:23,0:23:58.91:0,59,2036	0/0:33,0:33:75.72:0,76,1957	0/0:26,0:25:72.23:0,72,2496	1/1:13,1:12:17.54:340,18,0	1/1:23,1:21:11.98:250,12,0	0/0:27,1:19:0.47:0,0,1	0/0:23,0:21:36.55:0,37,907	0/0:18,0:18:48.16:0,48,1439	0/0:43,0:40:89.95:0,90,2783	0/1:16,1:14:6.99:210,0,7	0/0:20,0:20:57.26:0,57,1615	0/0:32,0:32:64.86:0,65,1673	0/0:12,0:11:21.04:0,21,813
chr10	9736071	.	ACACACACAC	A	1958.40	PASS	AB=0.903;AC=13;AF=0.232;AN=56;BaseQRankSum=7.554;DP=676;FS=4.497;HRun=0;HaplotypeScore=152.7424;InbreedingCoeff=0.8101;MQ=54.79;MQ0=55;MQRankSum=-6.756;QD=12.47;ReadPosRankSum=0.087;VQSLOD=2.4726;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:11,24:28:11.67:340,12,0	0/0:9,0:9:24.08:0,24,668	0/0:39,0:16:48.16:0,48,635	0/0:31,0:9:24.96:0,25,310	1/1:3,15:18:0.47:2,0,0	1/1:7,18:21:15.05:401,15,0	0/1:25,3:26:22.21:277,0,22	0/0:31,0:30:83.29:0,83,1383	0/0:17,0:17:32.49:0,32,1222	0/0:26,0:25:72.24:0,72,1793	0/0:16,0:15:33.57:0,34,991	0/0:25,0:24:55.90:0,56,1567	0/0:22,0:21:35.71:0,36,971	0/0:20,0:20:49.41:0,49,1033	0/0:25,0:25:45.14:0,45,1144	0/0:22,0:22:55.54:0,56,1669	0/0:32,0:32:72.71:0,73,1667	0/0:26,0:25:71.24:0,71,2019	1/1:4,9:11:24.06:381,24,0	1/1:5,18:20:11.77:352,12,0	0/0:16,14:20:0.47:0,0,1	0/0:23,0:21:33.06:0,33,746	0/0:18,0:18:48.16:0,48,1216	0/0:43,0:40:86.63:0,87,2407	1/1:10,5:12:15.05:375,15,0	0/0:20,0:20:50.60:0,51,1302	0/0:31,0:31:57.28:0,57,1259	0/0:13,0:12:21.07:0,21,703
chr10	9736073	.	ACACACAC	A	1406.22	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=7.989;DP=648;FS=3.446;HRun=0;HaplotypeScore=132.7373;InbreedingCoeff=0.9120;MQ=57.23;MQ0=53;MQRankSum=-7.248;QD=10.99;ReadPosRankSum=0.662;VQSLOD=2.6862;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:32,0:25:11.66:209,12,0	0/0:9,0:9:24.08:0,24,541	0/0:37,0:17:51.17:0,51,674	0/0:27,0:10:27.08:0,27,349	0/0:15,0:15:2.95:0,3,19	1/1:26,0:21:15.05:274,15,0	1/1:9,17:24:15.52:299,16,0	0/0:32,0:31:82.48:0,82,1167	0/0:17,0:17:34.05:0,34,987	0/0:26,0:25:69.21:0,69,1380	0/0:16,0:15:33.57:0,34,812	0/0:25,0:24:52.53:0,53,1268	0/0:22,0:21:29.69:0,30,724	0/0:20,0:20:49.01:0,49,820	0/0:25,0:25:42.14:0,42,959	0/0:20,0:20:54.65:0,55,1358	0/0:33,0:33:75.25:0,75,1453	0/0:25,0:25:67.43:0,67,1578	1/1:13,0:11:24.06:334,24,0	1/1:22,0:19:11.87:239,12,0	0/0:24,0:16:0.47:0,0,1	0/0:23,0:21:33:0,33,620	0/0:18,0:18:48.16:0,48,1011	0/0:43,0:40:89.96:0,90,2087	1/1:9,0:6:15.05:229,15,0	0/0:19,0:19:52.51:0,53,1092	0/0:29,0:29:53.11:0,53,981	0/0:14,0:13:27.09:0,27,654
chr10	9736640	.	GA	G	2868.47	PASS	AB=0.947;AC=17;AF=0.304;AN=56;BaseQRankSum=10.231;DP=523;FS=3.961;HRun=10;HaplotypeScore=52.6537;InbreedingCoeff=0.8704;MQ=74.78;MQ0=0;MQRankSum=0.482;QD=17.71;ReadPosRankSum=3.184;VQSLOD=4.4425;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,18:19:47.99:417,48,0	0/0:4,0:5:11.99:0,12,120	0/0:12,0:11:17.88:0,18,175	0/1:17,1:17:19.48:19,0,161	1/1:3,25:29:68:579,68,0	1/1:1,13:14:18.43:315,18,0	1/1:1,7:8:18:156,18,0	0/0:28,0:29:63.12:0,63,676	0/0:11,2:13:10.05:0,10,339	0/0:16,1:17:19.06:0,19,432	0/0:25,1:26:31.10:0,31,571	0/0:13,0:13:33.09:0,33,365	0/0:21,0:22:56.97:0,57,596	0/0:12,0:14:34.89:0,35,377	0/0:17,1:18:22.06:0,22,465	0/0:23,0:23:61.40:0,61,660	0/0:14,1:15:4.03:0,4,273	0/0:20,0:20:60.14:0,60,649	1/1:1,16:17:47.99:416,48,0	1/1:1,25:26:71.97:625,72,0	1/1:0,4:4:12:104,12,0	0/0:20,0:20:25.10:0,25,482	0/0:16,1:18:24.89:0,25,466	0/0:16,0:16:42.10:0,42,457	1/1:8,19:27:50.97:442,51,0	0/0:21,0:20:51.12:0,51,550	0/0:35,1:36:67.18:0,67,957	0/0:21,0:23:68.85:0,69,725
chr10	9737190	.	TGCG	T	228.45	PASS	AB=0.879;AC=6;AF=0.107;AN=56;BaseQRankSum=3.784;DP=442;FS=4.433;HRun=0;HaplotypeScore=85.8399;InbreedingCoeff=-0.1190;MQ=74.82;MQ0=8;MQRankSum=-0.472;QD=2.93;ReadPosRankSum=-1.922;VQSLOD=1.2090;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:17,4:20:22.51:0,23,176	0/0:4,0:4:12.04:0,12,241	0/0:33,0:22:54.11:0,54,1053	0/0:35,0:21:50.62:0,51,908	0/1:11,5:16:59.99:82,0,60	0/1:10,1:11:69.44:69,0,75	0/0:15,1:15:6.04:0,6,147	0/0:23,0:22:60.03:0,60,1111	0/0:8,0:8:24.07:0,24,466	0/0:19,0:19:47.59:0,48,895	0/0:12,0:12:32.79:0,33,534	0/0:13,0:13:36.05:0,36,619	0/0:16,0:16:41.80:0,42,783	0/0:14,0:14:42.13:0,42,826	0/0:16,0:16:42.14:0,42,873	0/0:18,0:18:51.15:0,51,982	0/0:26,0:26:75.21:0,75,1455	0/0:8,0:8:24.08:0,24,476	0/1:10,1:10:2.76:3,0,68	0/1:9,2:11:24.87:25,0,84	0/1:19,0:19:54.28:54,0,156	0/0:5,0:5:15.05:0,15,308	0/0:9,0:9:27.02:0,27,439	0/0:20,0:20:56.99:0,57,1058	0/1:8,2:10:47.19:114,0,47	0/0:24,0:24:72.04:0,72,1278	0/0:14,0:13:41.35:0,41,666	0/0:10,0:9:27.05:0,27,459
chr10	9737508	.	A	ATT	5228.81	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=-12.516;DP=408;FS=0.000;HRun=8;HaplotypeScore=44.2302;InbreedingCoeff=0.8873;MQ=76.82;MQ0=0;MQRankSum=-0.385;QD=33.95;ReadPosRankSum=0.567;VQSLOD=4.2205;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,20:24:47.65:723,48,0	0/0:6,0:6:18.05:0,18,201	0/0:5,0:6:13.55:0,14,104	0/1:10,0:10:9.06:9,0,50	1/1:1,21:22:60.16:916,60,0	1/1:3,15:19:42.14:667,42,0	1/1:1,18:19:39.13:619,39,0	0/0:31,0:31:72.17:0,72,803	0/0:5,0:5:9.02:0,9,100	0/0:17,0:17:48.12:0,48,522	0/0:19,0:19:45.09:0,45,493	0/0:12,0:12:24.04:0,24,267	0/0:11,0:11:30.06:0,30,324	0/0:5,0:5:12.03:0,12,134	0/0:13,0:13:30.05:0,30,323	0/0:14,0:14:36.09:0,36,401	0/0:25,0:25:75.16:0,75,813	0/0:18,0:18:54.15:0,54,602	1/1:7,12:19:48.13:693,48,0	1/1:1,12:13:36.05:517,36,0	1/1:0,11:12:32.60:485,33,0	0/0:2,0:2:6.02:0,6,67	0/0:8,0:8:21.06:0,21,234	0/0:11,0:11:30.05:0,30,324	1/1:2,13:15:39.13:600,39,0	0/0:25,0:25:69.17:0,69,762	0/0:18,0:18:48.10:0,48,525	0/0:8,0:8:18.04:0,18,201
chr10	9737694	.	A	AGT	6045.55	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=5.060;DP=475;FS=0.957;HRun=0;HaplotypeScore=82.1725;InbreedingCoeff=0.9775;MQ=65.36;MQ0=5;MQRankSum=0.300;QD=36.42;ReadPosRankSum=0.489;VQSLOD=6.8646;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:34,7:40:84.25:1355,84,0	0/0:5,0:5:15.04:0,15,180	0/0:30,0:17:24.58:0,25,304	0/0:27,0:14:28.71:0,29,316	1/1:20,5:25:66.22:1080,66,0	1/1:22,3:25:63.15:937,63,0	1/1:15,1:16:34.67:515,35,0	0/0:30,0:30:75.20:0,75,959	0/0:12,0:12:36.12:0,36,473	0/0:10,0:10:24.06:0,24,301	0/0:21,0:21:51.17:0,51,668	0/0:12,0:12:11.79:0,12,407	0/0:15,0:15:42.14:0,42,551	0/0:13,0:13:36.12:0,36,472	0/0:9,0:9:27.09:0,27,354	0/0:8,0:7:20.35:0,20,243	0/0:23,0:23:68.51:0,69,815	0/0:18,0:18:34.71:0,35,443	1/1:15,4:18:45.02:732,45,0	1/1:16,2:18:39.13:624,39,0	1/1:5,1:6:9.03:154,9,0	0/0:14,0:14:42.14:0,42,552	0/0:5,0:5:15.05:0,15,197	0/0:10,0:10:27.09:0,27,355	1/1:13,3:16:39.13:648,39,0	0/0:13,0:13:36.12:0,36,473	0/0:22,0:22:57.18:0,57,735	0/0:12,0:12:36.12:0,36,470
chr10	9738737	.	T	TTG	8797.51	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=17.594;DP=825;FS=9.343;HRun=0;HaplotypeScore=109.3208;InbreedingCoeff=0.9977;MQ=72.97;MQ0=0;MQRankSum=-3.691;QD=36.50;ReadPosRankSum=1.154;VQSLOD=6.9548;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,41:49:99:2063,130,0	0/0:17,0:17:48.16:0,48,639	0/0:23,0:23:54.16:0,54,693	0/0:25,0:25:20.25:0,20,678	1/1:3,23:26:63.21:1030,63,0	1/1:2,17:19:51.17:835,51,0	1/1:6,21:27:53.68:883,54,0	0/0:30,0:30:87.29:0,87,1158	0/0:30,0:30:84.25:0,84,1089	0/0:37,0:36:84.26:0,84,1089	0/0:28,0:28:78.26:0,78,1038	0/0:27,0:27:69.19:0,69,884	0/0:31,0:31:81.27:0,81,1078	0/0:35,0:35:99:0,105,1382	0/0:48,0:48:99:0,135,1797	0/0:34,0:34:87.26:0,87,1127	0/0:19,0:19:54.18:0,54,717	0/0:19,0:19:48.16:0,48,636	1/1:11,8:19:17.62:563,18,0	1/1:6,27:33:81.08:1365,81,0	1/1:4,33:37:84.29:1375,84,0	0/0:41,0:41:99:0,111,1415	0/0:27,0:27:75.21:0,75,965	0/0:23,0:23:66.20:0,66,861	1/1:9,22:31:41.63:684,42,0	0/0:34,0:34:96.31:0,96,1265	0/0:43,0:43:99:0,117,1502	0/0:13,0:13:36.12:0,36,479
chr10	9740014	.	A	AC	6130.91	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-10.732;DP=761;FS=7.141;HRun=2;HaplotypeScore=73.4289;InbreedingCoeff=0.9999;MQ=80.93;MQ0=0;MQRankSum=-2.223;QD=38.80;ReadPosRankSum=1.238;VQSLOD=5.3413;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,60:62:99:2246,157,0	0/0:11,0:11:30.09:0,30,372	0/0:22,0:22:45.41:0,45,639	0/0:22,0:22:46.89:0,47,538	1/1:0,29:29:87.29:1250,87,0	1/1:0,19:19:54.18:777,54,0	1/1:1,25:26:69.23:993,69,0	0/0:30,0:30:90.23:0,90,1089	0/0:22,0:22:66.19:0,66,805	0/0:28,0:28:84.23:0,84,1017	0/0:14,0:14:42.13:0,42,521	0/0:39,0:39:99:0,111,1358	0/0:21,0:21:60.19:0,60,744	0/0:34,0:34:99:0,99,1225	0/0:35,0:35:99:0,105,1302	0/0:36,0:36:99:0,99,1227	0/0:42,0:42:99:0,111,1375	0/0:24,0:24:72.18:0,72,873	0/0:25,0:25:72.23:0,72,890	0/0:22,0:22:63.18:0,63,768	0/0:33,0:33:96.27:0,96,1161	0/0:25,0:25:68.81:0,69,834	0/0:26,0:26:78.24:0,78,963	0/0:29,1:30:73.25:0,73,1042	1/1:0,22:22:60.20:864,60,0	0/0:23,0:23:66.21:0,66,818	0/0:22,0:22:66.21:0,66,817	0/0:17,0:17:45.14:0,45,558
chr10	9740254	.	G	GTA	3509.48	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=2.953;DP=773;FS=5.170;HRun=0;HaplotypeScore=106.5160;InbreedingCoeff=0.9996;MQ=79.49;MQ0=1;MQRankSum=-0.719;QD=41.78;ReadPosRankSum=0.017;VQSLOD=4.9093;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,150,2008	0/0:10,0:10:30.09:0,30,404	0/0:23,0:23:48.11:0,48,633	0/0:15,0:15:42.14:0,42,578	0/0:27,0:27:78.25:0,78,1073	0/0:27,0:27:75.25:0,75,1050	0/0:22,0:22:57.16:0,57,763	0/0:30,0:30:75.22:0,75,1005	0/0:26,0:26:72.23:0,72,991	0/0:27,0:26:75.10:0,75,987	0/0:18,0:18:48.12:0,48,635	0/0:39,0:39:99:0,117,1617	0/0:30,0:30:90.29:0,90,1244	0/0:21,0:21:63.20:0,63,865	0/0:33,0:33:99:0,99,1355	0/0:35,0:35:99:0,105,1470	0/0:42,0:42:99:0,126,1746	0/0:27,0:27:78.26:0,78,1090	1/1:3,20:23:60.20:1043,60,0	1/1:1,27:27:72.25:1295,72,0	1/1:7,26:33:66.23:1172,66,0	0/0:23,0:23:63.15:0,63,839	0/0:19,0:19:54.18:0,54,755	0/0:34,0:34:87.29:0,87,1217	0/0:23,0:23:66.21:0,66,907	0/0:40,0:40:99:0,120,1644	0/0:34,0:34:99:0,102,1395	0/0:10,0:10:30.10:0,30,420
chr10	9741982	.	CG	C	2667.93	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=10.530;DP=411;FS=0.000;HRun=5;HaplotypeScore=54.7778;InbreedingCoeff=0.9479;MQ=91.20;MQ0=0;MQRankSum=-2.665;QD=28.38;ReadPosRankSum=1.733;VQSLOD=3.8717;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:99:0,99,1297	0/0:1,0:1:3.01:0,3,41	0/0:17,0:18:26.09:0,26,594	0/0:21,0:21:28.09:0,28,587	0/0:13,0:12:36.08:0,36,468	1/1:0,11:11:27.08:306,27,0	1/1:0,17:17:51.15:578,51,0	0/0:25,0:25:60.13:0,60,767	1/1:1,21:22:57.16:646,57,0	0/0:6,0:6:15.05:0,15,202	0/0:13,0:13:36.11:0,36,471	0/0:15,0:15:39.09:0,39,511	0/0:8,0:8:21.02:0,21,264	0/0:15,0:15:45.10:0,45,591	0/0:19,0:19:57.19:0,57,777	0/0:18,0:18:45.14:0,45,596	0/0:30,0:30:87.27:0,87,1168	0/0:14,0:14:39.13:0,39,532	1/1:2,9:11:27.07:306,27,0	1/1:1,6:7:18.05:204,18,0	1/1:0,26:26:72.21:815,72,0	0/0:5,0:5:15.04:0,15,188	0/0:9,0:9:24.05:0,24,295	0/0:23,0:23:66.22:0,66,901	0/0:7,0:7:21.06:0,21,269	0/0:8,0:8:21.07:0,21,287	0/0:12,0:12:33.11:0,33,449	0/0:4,0:4:12.02:0,12,147
chr10	9742359	.	T	TA	2645.18	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-12.219;DP=810;FS=1.601;HRun=1;HaplotypeScore=76.4308;InbreedingCoeff=0.9995;MQ=78.73;MQ0=0;MQRankSum=-1.995;QD=40.08;ReadPosRankSum=1.721;VQSLOD=4.3826;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,162,2070	0/0:11,0:11:33.11:0,33,428	0/0:33,0:33:92.11:0,92,1076	0/0:20,0:20:54.08:0,54,621	0/0:31,0:31:93.30:0,93,1208	1/1:1,18:19:54.18:809,54,0	1/1:0,23:23:63.21:944,63,0	0/0:42,0:42:99:0,114,1442	1/1:0,24:24:69.23:1034,69,0	0/0:31,0:31:93.29:0,93,1185	0/0:25,0:25:69.21:0,69,883	0/0:33,0:33:99:0,99,1255	0/0:33,0:33:99:0,99,1283	0/0:29,0:29:78.23:0,78,985	0/0:43,0:43:99:0,123,1581	0/0:29,0:29:87.27:0,87,1114	0/0:36,0:36:99:0,105,1342	0/0:17,0:17:51.15:0,51,647	0/0:23,0:23:69.21:0,69,881	0/0:27,0:27:81.26:0,81,1051	0/0:49,0:49:99:0,141,1813	0/0:27,0:27:78.25:0,78,1013	0/0:19,0:19:54.17:0,54,698	0/0:28,0:28:84.27:0,84,1088	0/0:21,0:21:57.17:0,57,726	0/0:29,0:29:84.27:0,84,1091	0/0:44,0:44:99:0,129,1674	0/0:9,0:9:27.09:0,27,351
chr10	9743235	.	ATG	A	5294.78	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=9.119;DP=602;FS=11.915;HRun=0;HaplotypeScore=104.4250;InbreedingCoeff=0.9963;MQ=66.04;MQ0=0;MQRankSum=-2.781;QD=30.78;ReadPosRankSum=5.370;VQSLOD=6.0774;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,38:39:96.32:1276,96,0	0/0:7,0:7:18.05:0,18,285	0/0:11,0:11:29.86:0,30,394	0/0:14,0:13:32.76:0,33,458	1/1:2,28:30:69.23:914,69,0	0/0:21,0:21:63.20:0,63,1053	0/0:15,0:15:39.13:0,39,663	0/0:37,0:37:96.31:0,96,1574	0/0:24,0:24:66.23:0,66,1135	0/0:26,0:26:69.22:0,69,1112	0/0:23,0:23:69.22:0,69,1162	0/0:16,0:16:45.15:0,45,779	0/0:31,0:31:87.28:0,87,1459	0/0:12,0:12:33.11:0,33,571	0/0:22,0:22:63.22:0,63,1079	0/0:20,0:20:60.19:0,60,1007	0/0:17,0:17:51.15:0,51,836	0/0:19,0:19:57.16:0,57,950	0/0:33,0:33:78.19:0,78,1225	0/0:23,0:23:63.22:0,63,1086	0/0:13,0:13:33.07:0,33,514	0/0:15,0:15:39.12:0,39,634	0/0:21,0:21:63.20:0,63,1045	0/0:10,0:10:30.08:0,30,482	1/1:6,28:34:62.90:838,63,0	1/1:2,21:23:63.16:791,63,0	1/1:3,37:40:93.16:1237,93,0	1/1:0,6:6:18.06:239,18,0
chr10	9747825	.	T	TG	23010.46	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-9.267;DP=654;FS=3.271;HRun=0;HaplotypeScore=75.8040;InbreedingCoeff=0.9920;MQ=85.25;MQ0=0;MQRankSum=-6.075;QD=43.42;ReadPosRankSum=4.337;VQSLOD=5.4156;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,30:32:87.30:1375,87,0	1/1:0,16:16:48.16:766,48,0	0/0:21,0:21:63.19:0,63,840	0/0:24,0:24:68.59:0,69,915	1/1:3,15:18:45.15:701,45,0	0/0:23,0:23:63.21:0,63,879	0/0:31,0:31:93.31:0,93,1299	1/1:2,40:42:99:1892,120,0	0/0:25,0:25:50.24:0,50,958	1/1:1,28:29:84.29:1342,84,0	1/1:2,9:11:21.07:334,21,0	1/1:1,28:29:78.27:1241,78,0	1/1:1,22:23:66.22:1043,66,0	1/1:0,22:22:54.18:861,54,0	1/1:0,26:26:72.25:1151,72,0	1/1:7,14:21:12.17:710,12,0	1/1:4,9:13:30.10:463,30,0	1/1:1,20:20:54.16:837,54,0	1/1:1,16:17:48.16:763,48,0	1/1:0,27:27:78.27:1247,78,0	1/1:1,32:33:96.33:1521,96,0	1/1:2,11:13:39.12:565,39,0	1/1:1,16:17:48.16:737,48,0	1/1:1,30:31:90.31:1414,90,0	1/1:0,15:15:45.15:723,45,0	1/1:1,33:34:99:1582,99,0	1/1:4,20:24:63.13:999,63,0	1/1:0,16:16:48.16:742,48,0
chr10	9747880	.	A	AGGAT	17078.50	PASS	AB=1.000;AC=39;AF=0.696;AN=56;BaseQRankSum=-5.138;DP=736;FS=3.041;HRun=0;HaplotypeScore=169.2738;InbreedingCoeff=0.9097;MQ=66.13;MQ0=2;MQRankSum=-3.774;QD=32.10;ReadPosRankSum=2.334;VQSLOD=5.0425;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:34,0:34:16.45:97,16,0	1/1:9,8:17:33.09:725,33,0	0/0:37,0:29:27.07:0,27,390	0/0:31,0:29:10.18:0,10,464	1/1:27,0:29:11.97:217,12,0	0/0:26,0:26:57.17:0,57,866	0/0:23,0:23:25.13:0,25,587	1/1:20,10:30:30.10:659,30,0	0/0:21,0:21:39.12:0,39,600	1/1:14,15:30:54.18:1270,54,0	1/1:4,23:26:72.16:1638,72,0	1/1:14,22:36:87.08:1953,87,0	1/1:12,14:26:57.13:1208,57,0	1/1:12,10:22:48.16:1079,48,0	1/1:5,13:18:45.14:1020,45,0	1/1:5,23:30:54.18:1306,54,0	1/1:2,10:12:21.07:508,21,0	1/1:11,7:17:27.09:611,27,0	0/0:17,0:17:30.06:0,30,429	0/0:24,0:24:57.19:0,57,913	0/0:24,0:24:39.10:0,39,565	1/1:7,23:31:63.13:1315,63,0	1/1:12,14:26:60.11:1238,60,0	1/1:13,15:28:54.16:1216,54,0	1/1:24,0:27:21.81:336,22,0	1/1:41,1:45:43.24:518,43,0	1/1:33,0:33:20.59:138,21,0	0/1:13,0:13:8.06:27,0,8
chr10	9751321	.	AG	A	754.96	PASS	AB=0.769;AC=9;AF=0.180;AN=50;BaseQRankSum=3.004;DP=415;FS=4.263;HRun=1;HaplotypeScore=121.5349;InbreedingCoeff=0.4280;MQ=35.22;MQ0=26;MQRankSum=-1.328;QD=10.34;ReadPosRankSum=-3.423;VQSLOD=0.4671;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,4:15:12.86:168,13,0	0/0:4,0:4:9.02:0,9,97	./.	./.	1/1:9,3:12:5.69:83,6,0	0/0:2,0:2:1.55:0,2,4	0/0:16,0:15:13.36:0,13,126	0/0:31,0:28:69.59:0,70,803	0/0:8,0:6:8.71:0,9,80	0/0:24,0:20:47.06:0,47,629	0/0:21,0:21:23.78:0,24,305	0/0:14,0:13:15.48:0,15,259	0/0:14,0:12:12:0,12,136	0/0:16,0:15:24.01:0,24,303	0/0:19,0:19:15.55:0,16,221	0/0:14,0:12:21.06:0,21,256	0/0:22,0:21:32.44:0,32,438	0/0:15,0:14:39.12:0,39,487	0/0:14,0:14:38.99:0,39,458	0/0:9,0:8:2.75:0,3,37	./.	0/0:21,0:20:26.83:0,27,323	0/0:18,0:18:2.26:0,2,240	0/0:22,0:21:15.17:0,15,253	1/1:6,7:12:16.30:177,16,0	0/1:3,5:8:89.01:153,0,89	0/1:10,8:17:43.45:253,0,43	0/1:6,0:6:51.95:63,0,52
chr10	9751329	.	AGAGAGAGAGAG	A	832.47	PASS	AB=0.990;AC=22;AF=0.407;AN=54;BaseQRankSum=4.752;DP=374;FS=18.385;HRun=0;HaplotypeScore=159.5143;InbreedingCoeff=0.1492;MQ=34.94;MQ0=23;MQRankSum=-5.271;QD=4.70;ReadPosRankSum=-2.118;VQSLOD=1.2555;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:12,1:12:8.49:106,8,0	1/1:4,0:4:9.41:43,9,0	0/0:11,0:1:2.84:0,3,14	./.	1/1:5,0:6:1.25:21,1,0	0/1:4,0:4:25.83:26,0,90	0/0:17,0:15:12.01:0,12,475	0/1:27,0:25:99:134,0,153	0/0:9,0:7:4:0,4,225	0/0:24,0:20:9.91:0,10,762	0/0:19,0:19:17.96:0,18,373	0/1:15,0:14:5.15:5,0,355	0/1:16,0:14:7.99:8,0,195	0/0:13,0:12:7.02:0,7,275	0/0:16,0:16:3.09:0,3,220	0/0:13,0:11:0.20:0,0,325	0/0:22,0:21:12.20:0,12,487	0/0:16,0:14:11.88:0,12,480	0/1:11,0:11:65.54:66,0,242	1/1:7,0:6:1.55:4,2,0	0/1:4,0:2:0:0,0,0	0/0:18,0:17:13.05:0,13,410	0/1:17,0:17:71.49:71,0,159	0/1:21,0:21:21.04:21,0,153	1/1:9,5:13:16.43:236,16,0	1/1:3,1:5:3.52:165,4,0	1/1:9,2:10:0.77:80,1,0	0/0:4,0:4:1.67:0,2,51
chr10	9751333	.	AG	A	723.89	PASS	AB=0.896;AC=16;AF=0.308;AN=52;BaseQRankSum=4.802;DP=377;FS=5.360;HRun=1;HaplotypeScore=126.1192;InbreedingCoeff=-0.0766;MQ=36.31;MQ0=22;MQRankSum=-5.231;QD=3.75;ReadPosRankSum=1.387;VQSLOD=0.5003;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,3:14:7.99:58,8,0	0/1:3,1:4:45.68:46,0,58	0/0:15,0:1:3:0,3,29	./.	1/1:3,2:5:0.47:1,0,0	0/0:6,0:6:6.94:0,7,49	0/0:18,0:16:12.89:0,13,110	0/1:19,8:24:99:380,0,244	0/0:9,0:7:10.93:0,11,117	0/1:22,2:20:11.73:12,0,324	0/0:15,3:18:10.07:0,10,108	0/0:14,0:13:6.42:0,6,128	0/0:17,0:15:24.07:0,24,280	0/0:13,0:12:14.98:0,15,187	0/1:14,1:15:26.87:54,0,27	0/0:12,0:10:2.39:0,2,242	0/1:19,3:21:92.03:92,0,122	0/1:15,0:13:30.78:31,0,56	0/0:12,0:12:23.53:0,24,319	0/0:6,0:5:3.01:0,3,34	./.	0/0:18,1:18:14.26:0,14,153	0/1:15,0:15:14.36:16,0,14	0/1:19,3:21:31.17:36,0,31	1/1:13,0:13:11.54:89,12,0	0/1:5,0:6:15.39:15,0,120	0/1:9,1:10:43.38:43,0,123	0/0:4,1:5:9.56:0,10,70
chr10	9751339	.	AG	A	1368.69	PASS	AB=0.908;AC=44;AF=0.786;AN=56;BaseQRankSum=0.651;DP=374;FS=4.718;HRun=1;HaplotypeScore=147.5995;InbreedingCoeff=0.1079;MQ=33.78;MQ0=22;MQRankSum=-1.354;QD=3.92;ReadPosRankSum=-0.093;VQSLOD=0.1797;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:17:9.81:45,10,0	1/1:6,0:5:9.05:36,9,0	0/0:17,0:1:2.84:0,3,14	0/1:18,0:3:2.50:2,0,55	1/1:5,0:5:1.25:21,1,0	0/1:6,2:8:24.03:61,0,24	1/1:14,3:15:11.64:71,12,0	1/1:26,1:23:44.68:208,45,0	0/0:8,0:7:1.74:0,2,21	1/1:22,0:21:0.49:94,0,0	1/1:15,0:15:3.85:8,4,0	0/1:15,0:14:9.71:39,0,10	0/1:17,0:15:6.91:12,0,7	0/1:10,0:9:0.26:20,0,0	1/1:16,0:16:10.32:33,10,0	1/1:10,0:8:12.24:38,12,0	1/1:20,0:19:22.53:117,23,0	1/1:11,2:11:11.40:97,11,0	0/1:7,7:14:1.48:256,0,1	1/1:2,3:4:1.55:4,2,0	0/1:3,1:2:0:0,0,0	1/1:12,0:11:6.10:15,6,0	1/1:15,0:15:17.45:129,17,0	1/1:15,1:16:12.05:65,12,0	1/1:17,0:17:10.09:40,10,0	1/1:10,0:10:0.36:45,0,0	0/1:13,0:13:4.66:16,0,5	1/1:6,0:6:2.86:18,3,0
chr10	9751341	.	A	AAGAG	4885.93	PASS	AB=1.000;AC=42;AF=0.750;AN=56;BaseQRankSum=2.239;DP=387;FS=8.169;HRun=0;HaplotypeScore=164.3530;InbreedingCoeff=0.4440;MQ=33.45;MQ0=22;MQRankSum=-1.493;QD=15.13;ReadPosRankSum=-0.949;VQSLOD=3.8222;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:20:13.13:135,13,0	1/1:7,0:6:11.20:184,11,0	0/0:17,0:1:3.01:0,3,38	0/0:19,0:3:8.61:0,9,86	1/1:8,0:8:6.14:60,6,0	0/1:8,0:8:4.29:4,0,95	0/0:15,0:13:9.39:0,9,123	1/1:27,0:23:42.13:750,42,0	0/0:8,0:7:11.90:0,12,145	1/1:22,0:21:41.78:578,42,0	1/1:15,0:15:19.53:106,20,0	1/1:14,0:13:26.37:221,26,0	1/1:13,4:15:32.28:319,32,0	1/1:10,0:9:17.88:105,18,0	1/1:17,0:17:30.20:211,30,0	1/1:9,0:8:23.87:248,24,0	1/1:21,0:20:38.13:457,38,0	1/1:14,0:13:1.61:390,2,0	0/1:14,0:14:92.79:93,0,158	1/1:6,0:5:3:28,3,0	0/0:5,0:3:2.96:0,3,19	1/1:12,0:11:20.19:117,20,0	1/1:15,0:15:33.07:274,33,0	0/1:19,0:19:20.45:150,0,20	0/1:17,0:17:11.47:78,0,11	1/1:10,0:10:17.84:156,18,0	1/1:14,0:14:34.65:207,35,0	1/1:6,0:6:3.46:15,3,0
chr10	9751350	.	AGG	A	1601.62	PASS	AB=0.780;AC=23;AF=0.411;AN=56;BaseQRankSum=2.680;DP=371;FS=9.404;HRun=2;HaplotypeScore=154.3927;InbreedingCoeff=0.1914;MQ=37.89;MQ0=25;MQRankSum=-1.866;QD=7.63;ReadPosRankSum=0.753;VQSLOD=-0.2620;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:21:25.24:0,25,167	0/1:3,3:5:20.42:63,0,20	0/0:21,0:2:3.79:0,4,18	0/0:19,0:3:9.03:0,9,133	0/1:7,0:7:10:10,0,22	0/0:9,0:10:19.42:0,19,250	0/0:12,0:10:18.21:0,18,159	0/1:15,2:13:28.04:28,0,277	0/0:8,0:8:7.44:0,7,225	0/1:14,4:17:36.07:221,0,36	1/1:7,5:12:11.92:78,12,0	1/1:4,10:13:9.46:191,9,0	1/1:8,9:15:30.63:274,31,0	1/1:10,4:13:18.07:122,18,0	0/1:6,9:15:25.64:199,0,26	1/1:2,6:7:15.17:154,15,0	0/1:11,7:17:99:119,0,105	0/1:10,6:14:61.76:62,0,124	0/0:15,0:15:41.64:0,42,476	0/0:5,0:4:6.02:0,6,87	0/0:9,0:6:0.85:0,1,55	1/1:6,6:11:3.55:97,4,0	0/1:4,12:16:59.57:107,0,60	1/1:8,8:16:3.69:43,4,0	0/0:15,0:15:10.03:0,10,136	0/0:12,0:12:24.58:0,25,207	0/0:13,0:13:24.89:0,25,156	0/1:4,0:4:18.08:18,0,51
chr10	9751357	.	G	GGAGGAA	954.56	PASS	AB=1.000;AC=22;AF=0.393;AN=56;BaseQRankSum=-1.539;DP=387;FS=9.101;HRun=0;HaplotypeScore=185.4808;InbreedingCoeff=0.1662;MQ=45.74;MQ0=22;MQRankSum=-0.357;QD=4.21;ReadPosRankSum=-3.522;VQSLOD=1.1552;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:22:30.22:30,0,139	0/0:5,0:4:3.35:0,3,83	0/0:22,0:3:3.01:0,3,31	0/0:23,0:7:7.30:0,7,118	0/0:9,0:9:4.73:0,5,141	0/1:10,0:10:24.01:24,0,56	0/1:9,0:8:7.30:7,0,17	0/1:15,0:12:15.97:16,0,51	0/0:9,0:9:11.30:0,11,96	0/1:19,0:18:15.85:16,0,182	1/1:10,0:10:4.13:25,4,0	0/1:15,0:14:19.48:19,0,109	0/0:17,0:16:8.04:0,8,277	0/1:14,0:13:15.89:16,0,79	1/1:15,0:15:17.16:94,17,0	0/0:9,0:8:3.44:0,3,167	0/1:19,0:19:1.89:2,0,224	0/0:15,0:13:16.59:0,17,155	1/1:8,5:13:13.44:570,13,0	1/1:4,1:4:6:125,6,0	1/1:10,0:11:8.89:64,9,0	1/1:14,0:14:10.34:52,10,0	0/1:16,0:16:9.46:39,0,9	0/1:17,0:17:2.11:26,0,2	0/0:17,0:17:27.73:0,28,225	0/0:13,0:13:35.26:0,35,484	0/0:14,0:14:27.73:0,28,428	0/0:6,0:6:11.42:0,11,136
chr10	9751359	.	AGGAGGGGGAGGT	A	9613.98	PASS	AB=0.995;AC=48;AF=0.857;AN=56;BaseQRankSum=-4.841;DP=408;FS=2.192;HRun=0;HaplotypeScore=185.9387;InbreedingCoeff=-0.1507;MQ=47.79;MQ0=22;MQRankSum=0.177;QD=23.56;ReadPosRankSum=-3.614;VQSLOD=3.3798;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:24:51.64:429,52,0	1/1:5,0:4:12.04:289,12,0	1/1:26,0:6:1.98:6,2,0	0/1:24,0:9:10.76:11,0,283	1/1:10,0:10:6.22:107,6,0	0/1:9,0:9:44.16:44,0,259	1/1:10,0:9:12.23:125,12,0	1/1:14,0:12:24.01:432,24,0	0/1:9,0:9:89.87:91,0,90	1/1:19,0:18:47.95:923,48,0	1/1:10,0:10:15.05:379,15,0	1/1:15,0:14:36.11:846,36,0	1/1:18,0:17:40.38:787,40,0	1/1:14,0:13:24.08:481,24,0	1/1:15,0:15:39.07:859,39,0	1/1:9,0:8:24:524,24,0	1/1:19,0:19:11.92:392,12,0	0/1:16,0:14:39.65:405,0,40	0/1:15,0:15:58.02:58,0,363	0/1:8,0:7:69.76:137,0,70	1/1:14,0:12:12.38:121,12,0	1/1:15,0:15:18.95:432,19,0	1/1:12,4:16:20.74:478,21,0	1/1:19,0:19:27.10:529,27,0	1/1:16,0:16:4.29:205,4,0	0/1:13,0:13:45.59:180,0,46	0/1:14,0:14:82.18:110,0,82	1/1:9,0:9:7.66:235,8,0
chr10	9751362	.	AGGGGGAGGT	A	11149.46	PASS	AB=0.974;AC=51;AF=0.911;AN=56;BaseQRankSum=-3.293;DP=412;FS=13.751;HRun=0;HaplotypeScore=168.3427;InbreedingCoeff=-0.1052;MQ=50.06;MQ0=22;MQRankSum=-1.667;QD=27.06;ReadPosRankSum=-2.111;VQSLOD=3.4204;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:21,4:24:55.73:995,56,0	1/1:4,1:4:12.04:217,12,0	1/1:29,0:7:3.88:38,4,0	0/1:25,0:9:20.08:20,0,189	1/1:7,3:10:19.40:294,19,0	0/1:9,0:10:99:128,0,147	1/1:10,1:10:15.62:224,16,0	1/1:13,0:11:24.01:338,24,0	1/1:7,0:7:6.46:117,6,0	1/1:8,12:19:51.03:856,51,0	1/1:9,1:10:15.05:261,15,0	1/1:16,0:15:38.34:664,38,0	1/1:17,1:17:42.08:607,42,0	1/1:6,8:13:23.82:386,24,0	1/1:13,1:14:38.65:644,39,0	1/1:8,0:8:23.11:390,23,0	1/1:18,1:19:13.10:318,13,0	0/1:15,0:13:8.45:371,0,8	0/1:14,0:14:99:109,0,159	0/1:8,0:7:8.51:193,0,9	1/1:14,0:12:11.74:163,12,0	1/1:6,8:14:18.53:313,19,0	1/1:16,0:16:21.78:379,22,0	1/1:19,0:19:27.38:419,27,0	1/1:16,2:18:42.07:748,42,0	1/1:14,2:16:47.99:886,48,0	1/1:12,2:14:39.12:674,39,0	1/1:9,0:9:24.03:399,24,0
chr10	9751368	.	AGGT	A	6055.03	PASS	AB=0.972;AC=51;AF=0.911;AN=56;BaseQRankSum=-0.497;DP=411;FS=3.099;HRun=0;HaplotypeScore=159.8345;InbreedingCoeff=0.2774;MQ=58.09;MQ0=12;MQRankSum=-1.330;QD=15.69;ReadPosRankSum=1.781;VQSLOD=4.6806;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:27:50.57:453,51,0	1/1:5,0:4:11.77:141,12,0	0/1:29,0:11:19.76:20,0,47	0/0:25,0:13:17.99:0,18,207	1/1:11,0:11:13.30:108,13,0	0/1:10,1:11:15.31:113,0,15	1/1:9,0:8:16.57:109,17,0	1/1:11,0:10:19.96:229,20,0	1/1:6,0:6:3.67:59,4,0	1/1:19,1:19:44.98:532,45,0	1/1:11,0:11:17.06:177,17,0	1/1:16,1:17:37.05:449,37,0	1/1:19,0:19:43.81:505,44,0	1/1:13,0:13:17.08:184,17,0	1/1:13,0:13:35.23:346,35,0	1/1:8,0:8:23.95:290,24,0	1/1:8,9:17:20.22:225,20,0	1/1:14,0:12:18.33:221,18,0	1/1:13,0:13:5.73:112,6,0	1/1:7,0:7:20.18:152,20,0	0/1:15,0:14:10.08:97,0,10	1/1:14,0:14:17.95:173,18,0	1/1:16,0:16:17.92:201,18,0	1/1:20,0:20:26.79:224,27,0	1/1:20,0:20:39.82:322,40,0	1/1:16,0:16:18.84:248,19,0	1/1:15,0:15:21.77:195,22,0	1/1:8,0:8:17.54:171,18,0
chr10	9751481	.	TA	T	17579.98	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=12.895;DP=658;FS=7.862;HRun=2;HaplotypeScore=104.6151;InbreedingCoeff=0.9982;MQ=88.37;MQ0=0;MQRankSum=-6.172;QD=35.52;ReadPosRankSum=5.582;VQSLOD=4.4298;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,37:37:99:1324,102,0	1/1:1,9:10:21.07:273,21,0	0/0:24,0:24:69.22:0,69,986	0/0:27,0:27:80.83:0,81,1064	1/1:0,28:28:81.26:1052,81,0	0/0:8,0:8:24.08:0,24,359	0/0:7,0:7:21.07:0,21,314	1/1:0,31:31:90.28:1154,90,0	0/0:12,0:12:36.12:0,36,534	1/1:0,26:26:75.24:971,75,0	1/1:0,30:30:84.27:1090,84,0	1/1:0,20:20:54.18:701,54,0	1/1:1,19:20:54.18:701,54,0	1/1:0,21:21:48.16:623,48,0	1/1:0,24:24:66.21:857,66,0	1/1:0,30:30:81.26:1052,81,0	1/1:0,24:24:63.20:817,63,0	1/1:1,13:14:39.13:506,39,0	0/0:34,0:34:99:0,99,1413	0/0:12,0:12:36.12:0,36,535	0/0:39,0:39:99:0,108,1604	1/1:0,34:34:84.23:1090,84,0	1/1:1,18:19:48.11:621,48,0	1/1:0,39:39:99:1480,114,0	1/1:0,17:17:51.17:662,51,0	1/1:1,25:26:72.23:934,72,0	1/1:0,23:23:63.20:816,63,0	1/1:0,22:22:66.21:857,66,0
chr10	9752970	.	AAGTCAATGTTTTTG	A	16950.76	PASS	AB=0.923;AC=45;AF=0.978;AN=46;BaseQRankSum=1.706;DP=313;FS=0.000;HRun=0;HaplotypeScore=308.2412;InbreedingCoeff=-0.0586;MQ=23.98;MQ0=88;MQRankSum=1.393;QD=59.48;ReadPosRankSum=1.706;VQSLOD=3.8885;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:11,1:6:99:124,0,106	1/1:5,2:4:6.02:259,6,0	./.	./.	1/1:8,7:15:15.05:545,15,0	1/1:7,3:5:9.03:389,9,0	1/1:0,1:1:3.01:130,3,0	./.	1/1:11,8:14:24.08:1037,24,0	1/1:4,9:10:24.08:1037,24,0	1/1:7,8:10:24.08:1036,24,0	1/1:8,6:13:18.06:777,18,0	1/1:6,8:8:24.08:1036,24,0	1/1:8,13:19:39.13:1684,39,0	1/1:9,10:11:30.10:1295,30,0	1/1:4,4:8:12.04:518,12,0	1/1:2,3:3:9.03:389,9,0	./.	1/1:1,2:2:6.02:259,6,0	1/1:11,8:15:24.08:1037,24,0	./.	1/1:10,4:9:12.04:518,12,0	1/1:7,10:14:30.10:1295,30,0	1/1:7,6:6:12.04:476,12,0	1/1:8,7:13:21.07:907,21,0	1/1:7,8:11:24.08:1037,24,0	1/1:5,8:13:24.08:1037,24,0	1/1:2,1:3:3.01:130,3,0
chr10	9753360	.	GT	G	8972.03	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=10.149;DP=639;FS=0.976;HRun=4;HaplotypeScore=66.6755;InbreedingCoeff=0.9986;MQ=60.36;MQ0=2;MQRankSum=4.290;QD=29.42;ReadPosRankSum=2.754;VQSLOD=4.9300;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:93.31:0,93,1301	1/1:0,11:11:33.10:395,33,0	0/0:25,0:22:66.22:0,66,905	0/0:17,0:16:45.15:0,45,612	0/0:38,0:38:99:0,105,1431	0/0:24,0:24:72.15:0,72,964	0/0:15,0:15:42.12:0,42,556	1/1:2,29:26:72.19:838,72,0	0/0:26,0:26:72.22:0,72,977	1/1:0,27:27:78.17:917,78,0	1/1:1,20:21:51.16:610,51,0	1/1:3,9:12:24.07:288,24,0	1/1:1,15:16:45.14:539,45,0	1/1:2,22:24:54.16:647,54,0	1/1:0,26:26:69.21:827,69,0	1/1:4,22:26:60.18:720,60,0	1/1:3,17:20:42.06:485,42,0	1/1:1,18:19:48.15:574,48,0	0/0:14,0:13:36.10:0,36,472	0/0:30,0:29:87.27:0,87,1180	0/0:19,0:19:57.18:0,57,782	1/1:1,24:25:63.15:739,63,0	1/1:2,22:24:60.08:715,60,0	1/1:3,20:23:57.17:679,57,0	0/0:28,0:28:78.21:0,78,1051	0/0:18,2:20:18.20:0,18,678	0/0:28,0:28:81.27:0,81,1133	0/0:18,0:18:51.17:0,51,699
chr10	9753997	.	TA	T	9039.70	PASS	AB=1.000;AC=41;AF=0.732;AN=56;BaseQRankSum=-1.255;DP=480;FS=0.000;HRun=7;HaplotypeScore=54.4728;InbreedingCoeff=0.8744;MQ=63.79;MQ0=3;MQRankSum=1.112;QD=22.66;ReadPosRankSum=0.739;VQSLOD=4.3042;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,22:25:50.87:570,51,0	1/1:0,8:8:21.05:214,21,0	0/0:12,0:9:14.16:0,14,185	0/0:9,0:4:8.68:0,9,64	1/1:1,25:26:74.88:712,75,0	0/0:25,0:25:72.21:0,72,876	0/0:5,0:5:9.02:0,9,100	1/1:2,34:36:99:1005,102,0	0/0:12,0:12:24.05:0,24,276	1/1:2,20:22:59.80:569,60,0	1/1:4,24:28:68.86:670,69,0	1/1:2,14:16:30.07:306,30,0	1/1:1,16:17:39.09:397,39,0	1/1:2,7:9:18.04:183,18,0	1/1:3,13:16:33.07:336,33,0	1/1:3,12:15:33.07:336,33,0	1/1:3,20:23:41.95:480,42,0	1/1:1,11:12:29.72:305,30,0	0/0:9,0:7:15.93:0,16,69	0/1:24,0:24:15.42:15,0,162	0/0:8,0:8:19.17:0,19,82	1/1:3,10:13:26.97:261,27,0	1/1:2,22:24:57.12:580,57,0	1/1:3,17:20:39.08:397,39,0	1/1:0,17:17:36.08:367,36,0	1/1:3,22:25:66.12:664,66,0	1/1:1,18:19:54.12:550,54,0	1/1:0,4:4:12.03:122,12,0
chr10	9754518	.	G	GA	1800.34	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-8.797;DP=617;FS=2.419;HRun=8;HaplotypeScore=56.0002;InbreedingCoeff=0.9248;MQ=56.23;MQ0=25;MQRankSum=1.086;QD=24.66;ReadPosRankSum=0.513;VQSLOD=4.4359;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:12:33.01:0,33,301	0/0:10,0:10:21:0,21,192	0/0:12,0:8:5.99:0,6,55	0/0:10,0:5:6:0,6,55	0/0:34,0:34:83.71:0,84,737	0/0:30,0:28:75.04:0,75,686	0/0:22,0:18:39.02:0,39,357	0/0:45,0:27:72.01:0,72,649	0/0:19,0:20:35.97:0,36,318	0/0:29,0:29:81.02:0,81,736	0/0:19,0:19:41.81:0,42,384	0/0:22,0:22:53.91:0,54,477	0/0:26,0:26:69.02:0,69,625	0/0:22,0:22:59.99:0,60,535	0/0:26,0:26:66:0,66,598	0/0:20,0:20:57.02:0,57,517	0/0:23,0:23:57.02:0,57,521	0/0:14,0:13:32.99:0,33,295	1/1:7,11:12:33.10:381,33,0	1/1:4,34:37:99:1112,99,0	1/1:2,15:17:39.12:450,39,0	0/0:24,0:25:68.05:0,68,605	0/0:20,0:20:45.02:0,45,412	0/0:23,0:23:66.04:0,66,604	0/0:15,0:14:36.01:0,36,329	0/0:24,0:23:66.03:0,66,601	0/0:33,0:33:96.05:0,96,879	0/0:7,0:6:18.01:0,18,165
chr10	9755390	.	T	TA	1543.21	PASS	AB=0.706;AC=12;AF=0.214;AN=56;BaseQRankSum=-2.535;DP=525;FS=0.464;HRun=12;HaplotypeScore=72.9377;InbreedingCoeff=0.7675;MQ=65.53;MQ0=3;MQRankSum=0.388;QD=10.94;ReadPosRankSum=0.855;VQSLOD=3.2425;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:15:25.82:140,26,0	0/0:8,0:8:17.87:0,18,128	0/0:14,1:8:2.95:0,3,21	0/0:11,0:8:8.91:0,9,50	1/1:5,2:26:28.04:228,28,0	0/0:26,0:26:68.53:0,69,498	0/0:16,0:17:13.83:0,14,203	0/0:29,0:31:61.47:0,61,437	0/0:14,0:16:30.21:0,30,188	0/0:20,0:22:37.67:0,38,268	0/0:19,0:19:44.73:0,45,328	0/1:4,1:6:11.52:12,0,81	0/0:14,1:15:9.50:0,9,224	0/0:18,0:18:41.63:0,42,299	0/0:20,0:21:49.66:0,50,345	0/0:9,0:9:20.87:0,21,153	0/0:22,0:22:53.27:0,53,384	0/0:15,0:14:26.77:0,27,191	0/0:5,0:29:49.23:0,49,149	0/0:2,0:21:40.17:0,40,119	0/0:0,0:14:22.41:0,22,65	0/0:19,1:20:18.22:0,18,282	0/0:15,1:18:11.62:0,12,239	0/0:15,0:15:35.11:0,35,243	0/1:4,16:20:1.75:308,0,2	1/1:4,22:26:63.04:590,63,0	1/1:7,22:27:13.11:296,13,0	1/1:6,10:17:15.02:146,15,0
chr10	9755864	.	A	AT	6779.45	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-2.492;DP=463;FS=0.000;HRun=5;HaplotypeScore=91.5768;InbreedingCoeff=0.9898;MQ=86.07;MQ0=0;MQRankSum=-2.320;QD=34.07;ReadPosRankSum=2.367;VQSLOD=4.6930;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:47.97:0,48,478	1/1:2,8:10:21.07:276,21,0	0/0:30,0:29:37.94:0,38,512	0/0:19,0:17:38.38:0,38,348	0/0:16,0:16:45.11:0,45,475	0/0:26,0:26:75.18:0,75,799	0/0:11,0:11:27.05:0,27,282	1/1:4,23:27:69.18:850,69,0	0/0:8,0:8:24.05:0,24,251	1/1:2,17:20:56.33:740,56,0	1/1:2,20:22:57.19:750,57,0	1/1:2,10:12:27.09:355,27,0	1/1:4,9:13:36.11:452,36,0	1/1:1,9:10:27.09:344,27,0	1/1:2,12:14:36.12:470,36,0	1/1:0,11:11:33.11:434,33,0	1/1:0,27:27:69.22:908,69,0	1/1:1,3:4:9.03:117,9,0	0/0:21,0:21:54.10:0,54,580	0/0:32,0:32:96.20:0,96,1006	0/0:10,0:10:30.06:0,30,313	1/1:3,9:12:33.09:419,33,0	1/1:0,10:10:30.10:394,30,0	1/1:0,7:7:21.07:269,21,0	0/0:22,0:22:48.12:0,48,516	0/0:21,0:21:54.08:0,54,563	0/0:17,0:17:45.10:0,45,477	0/0:9,0:9:27.03:0,27,273
chr10	9755912	.	TGA	T	355.87	PASS	AB=0.965;AC=21;AF=0.389;AN=54;BaseQRankSum=3.125;DP=414;FS=13.116;HRun=0;HaplotypeScore=127.8201;InbreedingCoeff=0.3226;MQ=60.86;MQ0=0;MQRankSum=3.396;QD=1.78;ReadPosRankSum=0.883;VQSLOD=1.9738;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:12.16:0,12,118	0/1:8,0:8:1.16:2,0,1	0/0:21,0:12:9.42:0,9,187	0/1:15,0:10:10.87:11,0,156	0/0:13,0:13:14.47:0,14,104	0/0:16,0:16:29.77:0,30,360	0/0:13,0:13:27.08:0,27,422	1/1:16,0:16:0.19:53,0,0	0/0:9,0:9:18.06:0,18,294	0/1:12,2:14:5.64:66,0,6	0/1:19,0:19:0.29:71,0,0	1/1:7,1:8:5.29:53,5,0	0/1:16,0:16:6.65:7,0,10	0/1:12,0:12:6.96:17,0,7	1/1:14,0:14:5.28:48,5,0	0/1:14,1:15:13.13:13,0,69	1/1:24,0:24:9.76:62,10,0	1/1:5,0:5:4.75:26,5,0	0/0:15,0:15:39.02:0,39,366	0/0:31,0:32:71.92:0,72,662	0/0:18,0:19:53.61:0,54,479	0/1:16,0:16:9.94:17,0,10	0/1:6,1:7:13.52:20,0,14	1/1:11,0:11:9.16:56,9,0	0/0:20,0:20:33.07:0,33,412	0/0:20,0:20:40.80:0,41,410	0/0:18,0:18:42.11:0,42,535	./.
chr10	9755923	.	G	GA	1122.53	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=-4.323;DP=383;FS=0.605;HRun=1;HaplotypeScore=114.3321;InbreedingCoeff=0.7673;MQ=62.82;MQ0=0;MQRankSum=4.022;QD=16.75;ReadPosRankSum=1.241;VQSLOD=3.9139;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:5.97:0,6,53	0/1:3,0:3:4.98:5,0,23	0/0:21,0:11:25.73:0,26,244	0/0:18,0:13:21:0,21,222	0/0:11,0:11:8.92:0,9,64	0/0:13,0:13:29.79:0,30,321	0/0:11,0:11:30.09:0,30,393	0/0:16,0:16:23.64:0,24,155	0/0:12,0:12:30.03:0,30,339	0/0:13,0:12:26.76:0,27,130	0/0:18,0:18:33.39:0,33,182	0/0:7,0:7:16.77:0,17,83	0/0:11,0:11:18.83:0,19,76	0/0:12,0:12:28.96:0,29,137	0/0:14,0:14:33.54:0,34,187	0/0:17,0:17:31.29:0,31,177	0/0:21,0:21:39.98:0,40,237	0/0:3,0:3:8.82:0,9,57	1/1:8,4:12:30.31:301,30,0	1/1:14,16:30:54.52:561,55,0	1/1:9,12:22:34.15:400,34,0	0/0:14,0:14:21.98:0,22,103	0/0:7,0:7:11.42:0,11,73	0/0:10,0:10:22.56:0,23,121	0/0:18,0:18:26.32:0,26,124	0/0:16,0:16:32.21:0,32,214	0/0:15,0:15:32.20:0,32,115	0/0:4,0:4:6.36:0,6,26
chr10	9755924	.	G	GA	606.33	PASS	AB=0.648;AC=4;AF=0.071;AN=56;BaseQRankSum=-2.828;DP=384;FS=0.000;HRun=0;HaplotypeScore=114.5673;InbreedingCoeff=0.3223;MQ=61.78;MQ0=0;MQRankSum=3.525;QD=9.47;ReadPosRankSum=2.313;VQSLOD=3.6283;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:6.17:0,6,55	0/0:3,0:3:6.36:0,6,37	0/0:21,0:11:25.79:0,26,254	0/0:18,0:13:26.99:0,27,323	0/0:11,0:11:5.99:0,6,49	0/0:13,0:13:33.01:0,33,358	0/0:11,0:11:33.09:0,33,429	0/0:16,0:16:24.74:0,25,164	0/0:12,0:12:33.06:0,33,380	0/0:13,0:12:14.55:0,15,49	0/0:18,0:18:35.35:0,35,208	0/0:7,0:7:14.08:0,14,66	0/0:11,0:11:20.83:0,21,93	0/0:12,0:12:29.22:0,29,141	0/0:14,0:14:31.16:0,31,174	0/0:17,0:17:32.16:0,32,185	0/0:19,1:20:7.11:0,7,192	0/0:3,0:3:8.85:0,9,59	1/1:8,4:12:7.08:110,7,0	0/1:15,16:31:19.36:321,0,19	0/1:9,12:21:6.92:281,0,7	0/0:13,0:13:18.38:0,18,85	0/0:7,0:7:11.52:0,12,78	0/0:12,0:12:23.20:0,23,136	0/0:18,0:18:27.53:0,28,134	0/0:16,0:16:34.28:0,34,231	0/0:15,0:15:33.13:0,33,125	0/0:4,0:4:5.72:0,6,30
chr10	9755927	.	G	GGGC	6923.62	PASS	AB=0.568;AC=35;AF=0.625;AN=56;BaseQRankSum=2.364;DP=414;FS=51.208;HRun=0;HaplotypeScore=100.1000;InbreedingCoeff=0.6716;MQ=60.63;MQ0=0;MQRankSum=-7.177;QD=25.00;ReadPosRankSum=3.620;VQSLOD=2.6211;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:2,0:20:4.84:119,0,5	1/1:2,5:8:9.02:179,9,0	0/0:20,0:11:28.45:0,28,317	0/0:19,0:14:33.09:0,33,447	0/1:4,0:13:0.02:0,0,0	0/0:12,0:12:24.06:0,24,325	0/0:14,0:14:39.09:0,39,542	1/1:13,3:19:21.74:285,22,0	0/0:12,0:12:32.58:0,33,418	1/1:5,4:10:27.03:477,27,0	1/1:7,7:16:29.37:448,29,0	1/1:4,5:9:20.73:355,21,0	1/1:1,13:15:20.31:423,20,0	1/1:1,16:17:30:568,30,0	1/1:1,11:14:28.84:518,29,0	0/1:4,16:20:13.74:586,0,14	1/1:7,12:20:37.94:760,38,0	1/1:0,4:4:6.02:126,6,0	0/0:8,0:8:23.14:0,23,147	0/0:29,0:29:69.90:0,70,535	0/0:22,0:22:57.01:0,57,474	1/1:2,11:13:9.02:424,9,0	1/1:3,3:7:8.96:107,9,0	1/1:2,10:13:21.04:399,21,0	0/1:3,0:20:11.42:277,0,11	0/1:6,1:15:2.31:281,0,2	1/1:1,1:19:39.12:478,39,0	1/1:1,0:4:9.02:113,9,0
chr10	9757098	.	CAT	C	613.65	PASS	AB=0.977;AC=16;AF=0.286;AN=56;BaseQRankSum=1.519;DP=663;FS=9.535;HRun=0;HaplotypeScore=133.0697;InbreedingCoeff=-0.2492;MQ=44.01;MQ0=10;MQRankSum=-5.375;QD=1.88;ReadPosRankSum=-3.192;VQSLOD=0.4828;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:42:3.35:0,3,209	1/1:7,0:7:5.95:43,6,0	0/1:31,0:8:6.30:6,0,64	0/0:38,0:16:20.41:0,20,231	0/0:30,0:30:17.97:0,18,147	0/0:21,0:21:43.14:0,43,807	0/0:20,2:22:2.17:0,2,557	0/1:16,0:16:26.99:27,0,161	0/1:24,0:24:24.65:25,0,201	0/1:31,0:31:99:203,0,124	0/0:17,0:17:6.41:0,6,44	0/0:22,0:22:9.80:0,10,71	0/1:26,0:26:29.36:29,0,91	0/1:22,0:22:1.32:1,0,74	0/0:28,0:27:8.54:0,9,74	0/0:28,0:27:12.68:0,13,119	0/1:13,0:13:25.34:51,0,25	0/1:10,0:10:44.84:45,0,72	0/0:20,0:19:39.38:0,39,251	0/0:22,0:22:23.67:0,24,142	0/0:31,0:31:14.81:0,15,110	0/1:22,0:22:9.11:9,0,85	0/0:14,0:13:5.66:0,6,61	0/1:36,0:36:2.70:3,0,108	0/1:25,0:25:1.56:2,0,103	0/1:16,15:31:99:170,0,153	0/1:23,0:23:32.73:99,0,33	0/1:9,0:9:44.54:45,0,45
chr10	9757100	.	TACACACACAC	T	1951.08	PASS	AC=8;AF=0.148;AN=54;BaseQRankSum=4.534;DP=683;FS=7.701;HRun=0;HaplotypeScore=183.6317;InbreedingCoeff=0.6495;MQ=42.28;MQ0=11;MQRankSum=-1.400;QD=19.13;ReadPosRankSum=4.336;VQSLOD=1.9166;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:42:14.40:0,14,141	0/0:8,0:8:8.69:0,9,105	./.	0/0:37,0:15:9.92:0,10,229	0/0:32,0:32:6:0,6,121	0/0:21,0:22:51.18:0,51,2244	0/0:20,0:21:27.09:0,27,1146	0/0:15,0:15:30.04:0,30,764	0/0:10,0:22:41.81:0,42,1111	0/0:33,0:33:84.81:0,85,1912	0/0:18,0:18:1.36:0,1,2	0/0:22,0:22:1.58:0,2,6	0/0:28,0:28:23.93:0,24,356	0/0:22,0:22:9.87:0,10,120	1/1:30,0:29:0.47:1,0,0	0/0:30,0:29:12.04:0,12,355	0/0:15,0:15:9.64:0,10,71	0/0:10,0:10:18.06:0,18,472	1/1:8,12:19:39.08:927,39,0	1/1:4,16:22:48.12:1076,48,0	1/1:14,16:29:3.01:76,3,0	0/0:23,0:23:5.73:0,6,49	0/0:18,0:17:8.96:0,9,154	0/0:35,0:35:6.49:0,6,208	0/0:26,0:26:9.85:0,10,83	0/0:36,0:36:79.50:0,79,1524	0/0:24,0:24:35.14:0,35,550	0/0:9,0:9:8.98:0,9,145
chr10	9759196	.	TAAG	T	3407.92	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=3.274;DP=605;FS=0.476;HRun=0;HaplotypeScore=148.2688;InbreedingCoeff=0.9851;MQ=81.30;MQ0=0;MQRankSum=2.145;QD=37.45;ReadPosRankSum=1.894;VQSLOD=4.2751;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:72.11:0,72,1471	0/0:6,0:6:18.06:0,18,407	0/0:22,0:23:66.05:0,66,1263	0/0:20,0:19:45.15:0,45,984	0/0:10,0:10:30.10:0,30,678	0/0:32,0:32:96.33:0,96,2173	0/0:29,0:29:87.30:0,87,1925	0/0:24,0:24:66.18:0,66,1374	0/0:21,0:21:63.16:0,63,1361	0/0:20,0:20:54.13:0,54,1075	0/0:12,0:12:33.11:0,33,694	0/0:27,0:27:72.18:0,72,1566	0/0:18,0:18:54.05:0,54,1062	0/0:33,0:33:93.32:0,93,2053	0/0:24,0:23:51.17:0,51,1109	0/0:20,0:20:51.18:0,51,1153	0/0:29,0:29:69.24:0,69,1550	0/0:18,0:18:51.18:0,51,1154	1/1:2,16:18:45.14:708,45,0	1/1:2,12:14:30.10:499,30,0	1/1:6,53:59:99:2201,135,0	0/0:22,0:22:63.22:0,63,1395	0/0:8,0:8:24.08:0,24,514	0/0:38,0:38:77.03:0,77,2011	0/0:12,0:12:34.36:0,34,730	0/0:19,0:19:54.19:0,54,1209	0/0:19,0:19:51.16:0,51,1049	0/0:4,0:4:12.04:0,12,271
chr10	9759216	.	A	ACACGCACGCACG	19139.15	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-5.429;DP=607;FS=7.054;HRun=0;HaplotypeScore=216.8535;InbreedingCoeff=0.8942;MQ=71.72;MQ0=0;MQRankSum=-11.626;QD=47.14;ReadPosRankSum=-1.092;VQSLOD=3.0475;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:24:9.03:230,9,0	1/1:3,1:4:3.01:176,3,0	0/0:21,0:21:21.02:0,21,531	0/0:19,0:19:21.73:0,22,639	1/1:10,0:13:9.03:244,9,0	0/0:30,0:30:66.17:0,66,2032	0/0:28,0:28:42.13:0,42,1277	1/1:20,0:20:21.06:757,21,0	0/0:20,0:20:45.15:0,45,1503	1/1:17,5:24:27.06:1332,27,0	1/1:7,1:9:9.03:505,9,0	1/1:15,13:28:30.09:1760,30,0	1/1:11,6:17:27.09:1536,27,0	1/1:25,10:37:45.15:2586,45,0	1/1:7,16:25:36.12:2103,36,0	1/1:15,7:22:30.10:1568,30,0	1/1:19,6:27:15.05:856,15,0	1/1:15,5:20:21.07:1130,21,0	0/0:19,0:19:39.13:0,39,1301	0/0:13,0:13:21.07:0,21,737	0/0:50,0:50:63.22:0,63,2057	1/1:17,1:18:3.01:176,3,0	1/1:6,3:9:12.04:693,12,0	1/1:34,5:41:18.53:1018,19,0	1/1:9,0:20:27.09:702,27,0	1/1:12,0:21:33.10:716,33,0	1/1:8,0:22:33.11:844,33,0	1/1:3,0:5:9.03:204,9,0
chr10	9759484	.	TGTGTGCGTGTGTG	T	1790.40	PASS	AB=0.912;AC=20;AF=0.357;AN=56;BaseQRankSum=1.724;DP=271;FS=5.801;HRun=0;HaplotypeScore=133.8057;InbreedingCoeff=0.2104;MQ=34.54;MQ0=8;MQRankSum=-0.803;QD=15.43;ReadPosRankSum=2.692;VQSLOD=2.0856;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:22:7.27:0,7,236	0/0:3,0:2:0.47:0,0,1	1/1:10,0:1:2.74:12,3,0	0/1:16,0:5:22.95:23,0,86	0/1:9,0:9:9.33:9,0,147	0/0:14,0:14:15.43:0,15,260	0/0:12,0:10:10.46:0,10,171	1/1:6,0:5:1.41:4,1,0	0/0:14,0:13:16.83:0,17,503	0/1:9,1:10:20.02:100,0,20	1/1:3,1:4:7.93:280,8,0	0/0:3,0:2:1.77:0,2,4	0/1:5,1:7:28.24:185,0,28	1/1:6,3:8:5.59:299,6,0	0/1:8,4:12:4.76:371,0,5	1/1:5,4:9:11.69:411,12,0	0/1:5,1:6:0.99:77,0,1	0/1:5,0:5:1.88:26,0,2	0/0:11,0:11:0.37:0,0,181	0/0:11,0:11:3.01:0,3,110	0/1:8,0:8:14.55:15,0,42	1/1:4,1:5:6.08:132,6,0	0/0:1,0:1:0.89:0,1,2	0/0:13,0:13:3.27:0,3,8	0/0:9,0:8:4.76:0,5,27	0/0:20,0:20:38.59:0,39,1526	0/0:16,0:16:24.05:0,24,901	0/0:5,0:5:9.03:0,9,416
chr10	9759488	.	TGC	T	1424.81	PASS	AB=0.920;AC=37;AF=0.771;AN=48;BaseQRankSum=0.846;DP=270;FS=3.407;HRun=0;HaplotypeScore=114.8900;InbreedingCoeff=0.1361;MQ=37.76;MQ0=6;MQRankSum=1.081;QD=6.48;ReadPosRankSum=-0.499;VQSLOD=3.0236;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:23:2.87:0,3,15	./.	1/1:9,0:1:3:26,3,0	0/1:16,0:5:0.88:74,0,1	0/0:9,0:9:2.87:0,3,15	1/1:14,0:14:1.24:31,1,0	0/1:13,0:12:3.93:13,0,4	1/1:4,0:4:11.89:83,12,0	0/1:14,1:14:10.49:56,0,10	1/1:10,0:10:23.77:167,24,0	1/1:4,0:4:8.40:47,8,0	./.	1/1:7,0:7:14.06:85,14,0	1/1:9,0:8:11.83:77,12,0	1/1:12,0:12:11.82:76,12,0	1/1:9,0:9:11.87:81,12,0	1/1:6,0:6:2.94:18,3,0	1/1:5,0:5:14.79:96,15,0	1/1:0,11:11:32.66:223,33,0	1/1:1,10:11:3.01:45,3,0	0/1:0,6:6:0:0,0,0	1/1:5,0:5:2.94:18,3,0	./.	0/1:13,0:13:0:0,0,0	./.	1/1:19,0:19:10.32:246,10,0	0/1:17,0:17:10.63:62,0,11	0/1:5,0:5:10.42:16,0,10
chr10	9759613	.	G	GATAGGTGGGC	7590.74	PASS	AB=1.000;AC=51;AF=0.911;AN=56;BaseQRankSum=7.684;DP=376;FS=14.896;HRun=0;HaplotypeScore=285.1122;InbreedingCoeff=0.5044;MQ=75.55;MQ0=0;MQRankSum=-8.336;QD=22.26;ReadPosRankSum=3.860;VQSLOD=2.2931;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:13:17.30:156,17,0	1/1:6,0:6:2.54:102,3,0	0/0:22,0:22:60.18:0,60,1681	0/0:13,0:13:25.69:0,26,658	1/1:22,0:22:11.89:119,12,0	1/1:14,0:14:26.32:373,26,0	1/1:28,0:27:61.75:902,62,0	1/1:22,0:22:23.34:293,23,0	1/1:17,0:16:37.33:542,37,0	1/1:18,0:18:8.47:145,8,0	1/1:14,0:14:3.01:106,3,0	1/1:13,0:13:29.20:321,29,0	1/1:9,0:9:9.03:185,9,0	1/1:5,6:11:13.76:354,14,0	1/1:16,0:16:34.36:512,34,0	1/1:11,0:11:27.04:404,27,0	0/1:6,0:6:5.05:100,0,5	1/1:3,0:3:9:225,9,0	1/1:5,0:5:10.61:52,11,0	1/1:9,0:9:3.48:39,3,0	1/1:6,0:6:3.01:38,3,0	1/1:23,0:23:13.15:128,13,0	1/1:20,0:20:20.86:248,21,0	1/1:13,0:13:21.05:484,21,0	1/1:5,0:5:3.01:105,3,0	1/1:13,0:13:32.46:396,32,0	1/1:12,0:12:35.53:766,36,0	1/1:12,0:12:31.84:494,32,0
chr10	9759616	.	A	AGGTGGGCCTCGGCTAGACAGGCTCACCTATT	41011.59	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=0.484;DP=404;FS=12.372;HRun=0;HaplotypeScore=284.6301;InbreedingCoeff=0.6515;MQ=73.82;MQ0=0;MQRankSum=-9.098;QD=111.14;ReadPosRankSum=1.553;VQSLOD=3.0121;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:13:29.91:909,30,0	1/1:1,1:11:2.98:429,3,0	0/0:23,0:23:66.17:0,66,2853	0/0:12,0:12:30.47:0,30,1332	1/1:21,0:21:14.99:812,15,0	1/1:14,0:14:32.96:1502,33,0	1/1:30,0:29:78.02:5448,78,0	1/1:21,0:21:44.96:1840,45,0	1/1:18,0:17:42.10:2976,42,0	1/1:18,0:18:34.15:2390,34,0	1/1:2,1:23:3.01:428,3,0	1/1:12,0:12:32.97:1583,33,0	1/1:2,1:14:9:768,9,0	1/1:3,2:5:15.05:1678,15,0	1/1:18,0:18:48.03:2878,48,0	1/1:13,0:13:33:2114,33,0	1/1:0,1:9:3.01:429,3,0	1/1:3,0:3:8.96:471,9,0	1/1:5,0:5:15.01:524,15,0	1/1:9,0:9:17.97:519,18,0	1/1:10,0:10:9.03:334,9,0	1/1:22,0:22:17.56:417,18,0	1/1:21,0:21:20.90:825,21,0	1/1:13,0:13:21.07:2233,21,0	1/1:0,1:9:3.01:429,3,0	1/1:13,0:13:36.12:2763,36,0	1/1:12,0:12:36:3534,36,0	1/1:12,0:12:33.11:2779,33,0
chr10	9759724	.	T	TAC	8964.32	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=0.853;DP=613;FS=24.905;HRun=0;HaplotypeScore=187.8358;InbreedingCoeff=0.9036;MQ=57.14;MQ0=10;MQRankSum=0.123;QD=23.16;ReadPosRankSum=3.419;VQSLOD=3.5999;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,12:27:24.08:384,24,0	1/1:1,6:7:12.04:192,12,0	0/0:49,0:26:21.04:0,21,229	0/0:36,0:23:24.74:0,25,212	1/1:13,4:17:17.07:221,17,0	0/0:23,0:23:57.17:0,57,683	0/0:36,0:36:34.05:0,34,825	1/1:19,6:25:33.11:517,33,0	0/0:17,0:17:39.12:0,39,468	1/1:11,14:24:23.92:734,24,0	1/1:6,10:16:27.09:427,27,0	1/1:7,14:22:45.15:705,45,0	1/1:6,13:19:33.11:525,33,0	1/1:7,6:14:15.05:239,15,0	1/1:14,11:25:36.10:546,36,0	1/1:7,2:9:9.03:144,9,0	1/1:13,11:24:0.15:482,0,0	1/1:6,14:20:50.64:739,51,0	0/0:9,0:14:18.29:0,18,87	0/0:7,0:21:23.03:0,23,109	0/0:12,0:29:9.27:0,9,37	1/1:9,11:20:33.11:525,33,0	1/1:12,11:23:9.17:623,9,0	1/1:15,14:30:23.14:471,23,0	1/1:8,6:14:13.38:203,13,0	1/1:17,9:26:11.95:648,12,0	1/1:10,6:17:32.32:449,32,0	1/1:2,5:7:12.04:192,12,0
chr10	9759745	.	GCACA	G	713.97	PASS	AB=0.724;AC=5;AF=0.089;AN=56;BaseQRankSum=-0.412;DP=626;FS=12.818;HRun=0;HaplotypeScore=224.9894;InbreedingCoeff=0.6945;MQ=45.87;MQ0=21;MQRankSum=-2.594;QD=10.20;ReadPosRankSum=-0.128;VQSLOD=1.8912;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:26:12.02:0,12,168	0/0:8,0:8:12.04:0,12,270	0/0:32,0:10:6.49:0,6,117	0/0:30,0:12:8.99:0,9,132	0/0:8,0:11:14.97:0,15,181	0/0:29,0:28:57.18:0,57,1344	0/0:33,0:35:71.63:0,72,1591	0/0:20,0:18:24.08:0,24,539	0/0:20,0:20:50.91:0,51,1176	0/0:29,0:27:60.21:0,60,1338	0/0:17,0:17:36.12:0,36,778	0/0:27,0:27:21.54:0,22,1218	0/0:22,0:22:48.15:0,48,1106	0/0:12,0:12:21.05:0,21,411	0/0:25,0:25:27.09:0,27,610	0/0:9,0:9:18.06:0,18,448	0/0:25,0:25:42.14:0,42,1018	0/0:22,0:22:55.07:0,55,1184	0/1:13,8:18:1.95:379,0,2	1/1:4,13:17:18.06:303,18,0	1/1:19,13:32:9.03:152,9,0	0/0:27,0:27:40.68:0,41,915	0/0:25,0:27:45.01:0,45,1009	0/0:35,0:35:53.99:0,54,1204	0/0:13,0:14:4.50:0,5,68	0/0:19,0:25:58.28:0,58,843	0/0:10,0:16:21:0,21,262	0/0:7,0:8:6.02:0,6,111
chr10	9759779	.	A	ACG	11019.84	PASS	AB=0.585;AC=35;AF=0.625;AN=56;BaseQRankSum=-7.255;DP=665;FS=8.519;HRun=0;HaplotypeScore=141.7350;InbreedingCoeff=0.6584;MQ=59.04;MQ0=21;MQRankSum=-1.590;QD=26.30;ReadPosRankSum=7.376;VQSLOD=5.2243;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,19:24:21.07:401,21,0	1/1:2,7:9:15.05:288,15,0	0/0:34,0:22:60.14:0,60,762	0/0:38,0:26:60.74:0,61,872	1/1:4,12:15:14.07:230,14,0	0/0:25,0:25:66.11:0,66,952	0/0:39,0:39:96.12:0,96,1260	1/1:2,24:27:67.69:918,68,0	0/0:19,0:19:54.11:0,54,718	1/1:0,29:29:74.77:1235,75,0	1/1:6,14:19:6.07:479,6,0	1/1:4,20:24:39.16:902,39,0	1/1:5,15:20:33.11:621,33,0	1/1:2,13:16:24.01:411,24,0	0/1:2,17:19:2.11:322,0,2	1/1:5,9:12:15.05:287,15,0	1/1:6,23:26:9.90:732,10,0	1/1:4,16:20:39.12:713,39,0	0/0:31,0:29:83.92:0,84,991	0/0:24,0:24:48.07:0,48,603	0/0:36,0:36:41.95:0,42,571	1/1:4,24:26:36.12:686,36,0	1/1:2,26:27:44.65:822,45,0	1/1:3,29:33:43.75:753,44,0	0/1:7,7:13:15.34:107,0,15	0/1:5,17:22:36.43:747,0,36	0/1:3,10:13:3.27:201,0,3	0/1:2,4:6:5.01:164,0,5
chr10	9760430	.	AGT	A	1789.39	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-2.984;DP=538;FS=3.708;HRun=0;HaplotypeScore=142.1297;InbreedingCoeff=0.5260;MQ=63.68;MQ0=7;MQRankSum=8.231;QD=16.27;ReadPosRankSum=4.592;VQSLOD=3.8301;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:32:19.22:0,19,88	0/0:3,0:3:5.49:0,5,35	0/0:47,0:32:33.09:0,33,484	0/0:30,0:21:15.79:0,16,290	0/0:24,0:24:0.91:0,1,6	1/1:6,13:21:38.78:421,39,0	1/1:7,25:32:0.99:650,1,0	0/0:27,0:20:30.05:0,30,338	1/1:7,27:34:72.18:842,72,0	0/0:19,0:17:26.90:0,27,303	0/0:12,0:11:2.85:0,3,26	0/0:9,0:8:2.84:0,3,14	0/0:14,0:14:15:0,15,139	0/0:12,0:12:5.84:0,6,39	0/0:11,0:11:5.79:0,6,37	0/0:13,0:13:11.03:0,11,58	0/0:12,0:12:1.49:0,1,4	0/0:14,0:14:18.60:0,19,156	0/0:21,0:23:41.95:0,42,438	0/0:24,0:29:11.61:0,12,79	1/1:20,0:23:0.45:1,0,0	0/0:20,0:20:7.87:0,8,37	0/0:13,0:13:8.49:0,8,69	0/0:7,0:7:2.50:0,2,9	0/0:17,0:15:7.67:0,8,29	0/0:19,0:17:30.07:0,30,345	0/0:12,0:11:18.04:0,18,204	0/0:6,0:6:3:0,3,26
chr10	9760452	.	T	TGTGTGTGTGTGTGTGTGTTA	14315.79	PASS	AB=1.000;AC=43;AF=0.768;AN=56;BaseQRankSum=-8.964;DP=532;FS=28.709;HRun=0;HaplotypeScore=170.3954;InbreedingCoeff=0.5133;MQ=57.10;MQ0=5;MQRankSum=-3.095;QD=36.24;ReadPosRankSum=-1.532;VQSLOD=2.5194;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:5,1:36:18.06:1104,18,0	1/1:0,0:10:6.02:410,6,0	0/0:30,0:12:27.04:0,27,851	0/0:25,0:15:32.52:0,33,649	1/1:0,0:18:11.68:282,12,0	0/0:21,0:21:57.18:0,57,2196	0/0:31,0:31:78.14:0,78,3013	1/1:1,0:18:51.16:1137,51,0	0/0:30,0:30:78.27:0,78,3455	1/1:4,7:20:46.05:1333,46,0	1/1:2,9:14:17.11:470,17,0	1/1:0,8:13:3.48:201,3,0	1/1:1,13:19:11.64:1148,12,0	1/1:0,6:11:6.02:501,6,0	1/1:1,12:18:3.01:184,3,0	1/1:0,1:21:12.04:825,12,0	1/1:1,0:11:15.05:197,15,0	1/1:2,6:13:18.06:1282,18,0	0/1:12,0:12:99:221,0,320	0/1:22,0:22:99:452,0,291	0/1:15,0:15:99:144,0,122	1/1:1,14:22:16.61:692,17,0	1/1:2,9:18:6.49:389,6,0	1/1:0,6:10:3.01:198,3,0	1/1:2,0:19:12.04:567,12,0	1/1:6,0:25:48.59:1885,49,0	1/1:2,0:12:6.02:459,6,0	1/1:0,0:7:3.01:234,3,0
chr10	9762226	.	C	CATGT	1373.53	PASS	AB=0.962;AC=16;AF=0.286;AN=56;BaseQRankSum=6.257;DP=526;FS=0.000;HRun=0;HaplotypeScore=143.4106;InbreedingCoeff=0.0822;MQ=70.51;MQ0=6;MQRankSum=-2.800;QD=5.80;ReadPosRankSum=-1.210;VQSLOD=2.0890;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:80.34:0,80,652	0/0:7,0:7:4.54:0,5,58	0/0:22,0:17:47.80:0,48,398	0/0:28,0:23:47.74:0,48,445	0/0:21,0:21:38.43:0,38,389	0/0:7,0:16:5.99:0,6,48	0/0:10,0:17:5.51:0,6,125	0/0:22,0:21:31.73:0,32,351	0/1:16,0:16:25.30:25,0,141	0/1:19,0:19:99:148,0,191	0/1:21,0:21:28.26:28,0,200	0/0:24,0:24:22.29:0,22,208	0/1:19,0:18:10.29:10,0,125	0/0:16,0:15:12.40:0,12,104	0/0:15,0:15:24.54:0,25,168	0/1:5,0:12:17.34:17,0,89	0/1:24,0:24:58.68:59,0,213	0/1:9,0:8:17.88:18,0,66	1/1:10,0:9:26.98:238,27,0	1/1:6,21:29:11.92:274,12,0	1/1:21,0:20:44.96:558,45,0	0/1:23,0:23:60.17:60,0,99	0/1:16,0:15:37.10:37,0,53	0/1:17,0:16:64.02:74,0,64	0/0:15,0:15:34.84:0,35,367	0/0:16,0:16:28.26:0,28,306	0/0:17,0:17:15.79:0,16,239	0/0:9,0:9:23.83:0,24,223
chr10	9762269	.	GTA	G	2012.66	PASS	AB=0.963;AC=14;AF=0.250;AN=56;BaseQRankSum=0.021;DP=589;FS=6.856;HRun=0;HaplotypeScore=115.2088;InbreedingCoeff=0.2414;MQ=56.26;MQ0=27;MQRankSum=1.536;QD=9.23;ReadPosRankSum=-0.639;VQSLOD=2.7782;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:43,1:44:64.74:775,65,0	0/1:11,0:11:20.38:20,0,85	0/0:39,0:14:31.78:0,32,293	0/0:54,0:23:33.01:0,33,433	0/1:23,0:22:44.88:274,0,45	0/0:21,0:19:14.49:0,14,121	0/0:16,0:16:15.85:0,16,132	0/0:14,0:12:17.96:0,18,281	0/0:16,0:16:12.54:0,13,179	0/0:19,0:19:43.33:0,43,452	0/0:16,0:16:24.44:0,24,210	0/1:17,0:16:9.32:9,0,32	0/1:19,0:18:0.68:1,0,158	0/0:19,0:18:20.78:0,21,161	0/0:21,0:21:6.04:0,6,240	0/0:6,0:5:12:0,12,110	0/0:33,0:29:29.44:0,29,392	0/0:7,0:7:4.64:0,5,144	0/0:16,0:14:37.21:0,37,347	0/0:28,0:28:43.66:0,44,437	0/0:23,0:22:19.59:0,20,379	0/0:23,0:23:25.83:0,26,282	0/1:20,0:20:12.72:13,0,178	0/1:22,0:20:13.14:13,0,180	0/1:19,1:20:32.84:250,0,33	1/1:19,0:19:28.66:353,29,0	1/1:16,4:20:13.28:409,13,0	0/1:2,1:3:11.28:61,0,11
chr10	9763104	.	AGTGTATGTGTGTGT	A	5872.02	PASS	AB=0.925;AC=42;AF=0.778;AN=54;BaseQRankSum=0.754;DP=471;FS=8.090;HRun=0;HaplotypeScore=159.0418;InbreedingCoeff=0.6043;MQ=74.96;MQ0=9;MQRankSum=-3.044;QD=17.12;ReadPosRankSum=3.706;VQSLOD=3.3026;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:16:36.36:287,36,0	1/1:7,0:7:14.78:113,15,0	0/0:29,0:19:38.06:0,38,375	0/0:37,0:25:43.05:0,43,429	./.	0/0:18,0:18:50.90:0,51,606	0/0:21,0:21:44.41:0,44,584	1/1:19,0:18:50.22:405,50,0	0/0:7,0:7:18.05:0,18,209	0/1:15,0:15:81.76:274,0,82	1/1:1,0:15:5.99:191,6,0	1/1:1,14:17:9.03:305,9,0	1/1:1,16:17:2.75:125,3,0	1/1:1,16:17:5.76:249,6,0	1/1:11,0:11:20.97:172,21,0	1/1:4,14:19:14.08:447,14,0	0/1:14,3:17:28.57:582,0,29	1/1:2,17:18:3.01:125,3,0	1/1:3,0:16:35.47:348,35,0	1/1:3,0:16:3:25,3,0	1/1:14,0:14:23.98:202,24,0	1/1:3,0:15:2.97:106,3,0	1/1:0,18:19:12.04:469,12,0	1/1:23,0:23:53.57:477,54,0	1/1:15,1:16:32.97:373,33,0	1/1:16,0:16:46.25:379,46,0	1/1:7,0:7:17.95:142,18,0	1/1:7,0:7:10.70:76,11,0
chr10	9764425	.	ACG	A	1236.42	PASS	AB=0.946;AC=25;AF=0.446;AN=56;BaseQRankSum=6.101;DP=518;FS=9.770;HRun=0;HaplotypeScore=161.5924;InbreedingCoeff=0.6195;MQ=88.79;MQ0=1;MQRankSum=-2.771;QD=5.65;ReadPosRankSum=-0.459;VQSLOD=2.2701;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:12,1:13:4.03:0,4,206	1/1:7,0:7:9.84:56,10,0	0/0:56,0:38:68.71:0,69,1336	0/0:74,1:51:53.44:0,53,1107	0/0:29,0:29:29.70:0,30,609	0/0:6,0:6:18.06:0,18,334	0/0:12,0:12:33.10:0,33,593	1/1:14,0:13:18.64:122,19,0	0/0:18,0:16:36.12:0,36,693	1/1:24,0:24:18.55:224,19,0	1/1:15,2:17:12.79:122,13,0	0/1:13,0:12:6.93:7,0,22	0/0:11,1:10:10.28:0,10,51	0/1:25,2:24:20.65:21,0,47	0/0:16,1:14:10.18:0,10,51	0/1:15,0:13:35.89:36,0,86	0/1:9,1:10:0.91:20,0,1	1/1:7,1:8:13.34:126,13,0	1/1:3,5:8:17.97:188,18,0	1/1:16,3:20:29.44:273,29,0	1/1:0,1:1:3:26,3,0	1/1:19,1:20:11.11:60,11,0	0/1:14,2:16:0.62:55,0,1	1/1:17,2:19:4.57:100,5,0	0/0:12,0:12:33:0,33,307	0/0:20,0:20:44.06:0,44,391	0/0:13,0:13:33.06:0,33,332	0/0:14,0:14:24.12:0,24,243
chr10	9764428	.	C	CAG	267.11	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=3.727;DP=505;FS=0.000;HRun=0;HaplotypeScore=164.9467;InbreedingCoeff=0.6904;MQ=89.14;MQ0=2;MQRankSum=-3.768;QD=6.51;ReadPosRankSum=-2.995;VQSLOD=2.4701;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:27.09:0,27,388	0/0:5,0:5:14.69:0,15,89	0/0:57,0:38:81.15:0,81,1128	0/0:81,0:51:87.58:0,88,1016	0/0:29,0:29:78.26:0,78,1122	0/0:6,0:6:17.99:0,18,248	0/0:11,0:11:30.09:0,30,438	0/0:11,0:10:19.97:0,20,127	0/0:17,0:15:39.13:0,39,592	0/0:24,0:24:41.42:0,41,314	0/0:17,0:17:9.83:0,10,145	0/0:13,0:12:27.07:0,27,180	0/0:11,0:9:17.91:0,18,139	0/0:27,0:24:45.34:0,45,313	0/0:15,0:13:23.72:0,24,169	0/1:14,0:12:4.17:4,0,199	0/0:9,0:9:14.79:0,15,104	0/0:8,0:8:9.07:0,9,49	1/1:7,0:7:6.74:70,7,0	1/1:11,4:19:19.96:293,20,0	1/1:1,0:1:3:25,3,0	0/0:20,0:20:34.13:0,34,214	0/0:15,0:15:30.96:0,31,187	0/0:20,0:20:3.92:0,4,186	0/0:12,0:12:33.11:0,33,488	0/0:20,0:20:57.17:0,57,789	0/0:12,0:12:33.11:0,33,481	0/0:12,0:12:36.12:0,36,507
chr10	9764460	.	G	GA	414.77	PASS	AB=0.972;AC=4;AF=0.071;AN=56;BaseQRankSum=4.251;DP=544;FS=2.906;HRun=3;HaplotypeScore=143.0339;InbreedingCoeff=0.5293;MQ=56.17;MQ0=23;MQRankSum=-2.974;QD=10.37;ReadPosRankSum=-0.862;VQSLOD=1.1874;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:13.44:0,13,86	0/0:7,0:5:15.01:0,15,169	0/0:59,0:19:34.13:0,34,396	0/0:70,0:23:13.05:0,13,199	0/0:21,0:18:31.66:0,32,213	0/0:16,0:15:39.07:0,39,444	0/0:14,0:13:33.01:0,33,363	0/0:27,0:22:50.57:0,51,466	0/0:15,0:15:36.04:0,36,412	0/0:26,0:23:66.19:0,66,784	0/0:18,0:18:45.11:0,45,512	0/0:16,0:14:27.07:0,27,308	0/0:14,0:9:18.05:0,18,213	0/0:27,0:21:45.12:0,45,532	0/0:19,0:14:30.09:0,30,356	0/0:16,0:12:33.10:0,33,397	0/0:7,0:7:15.05:0,15,190	0/0:10,0:9:18.02:0,18,205	0/1:14,1:13:64.24:155,0,64	1/1:9,10:19:7.97:331,8,0	0/1:2,0:3:1.48:36,0,1	0/0:21,0:19:38.85:0,39,447	0/0:13,0:10:17.08:0,17,184	0/0:12,0:12:32.97:0,33,404	0/0:13,0:12:32.48:0,32,277	0/0:22,0:20:56.29:0,56,454	0/0:23,0:22:27.77:0,28,338	0/0:7,0:6:17.29:0,17,125
chr10	9764470	.	A	AAG	2768.27	PASS	AB=0.856;AC=32;AF=0.571;AN=56;BaseQRankSum=0.256;DP=494;FS=18.386;HRun=0;HaplotypeScore=114.6452;InbreedingCoeff=-0.4323;MQ=46.11;MQ0=22;MQRankSum=-5.320;QD=6.28;ReadPosRankSum=-0.841;VQSLOD=2.0066;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:7,0:7:8.08:71,8,0	0/1:3,3:4:27.97:28,0,93	0/0:47,0:13:28.78:0,29,328	0/1:51,0:12:0.56:1,0,91	1/1:20,3:20:8.29:177,8,0	0/1:14,3:16:99:232,0,186	0/1:15,0:12:56.68:57,0,278	0/1:28,0:23:99:226,0,352	0/1:16,0:16:57.54:58,0,214	0/1:15,12:23:99:381,0,430	0/1:14,2:16:9.59:10,0,277	0/1:8,7:11:90.22:90,0,186	0/1:6,9:9:39.55:40,0,187	0/1:11,8:13:76.38:76,0,263	0/1:12,3:10:99:139,0,130	0/1:12,6:13:27.13:27,0,307	0/0:5,1:4:6.02:0,6,79	0/1:8,0:7:67.76:84,0,68	0/1:13,0:11:0.66:1,0,108	0/1:21,0:20:25.79:26,0,101	1/1:3,0:3:5.23:45,5,0	0/1:14,8:21:24.96:25,0,357	0/1:11,1:9:39.88:40,0,184	0/1:12,0:12:13.25:13,0,301	1/1:6,6:10:14.01:185,14,0	1/1:14,6:19:42.12:601,42,0	0/1:16,5:21:17.29:270,0,17	1/1:5,1:4:4.05:27,4,0
chr10	9764517	.	A	AG	2195.39	PASS	AB=0.832;AC=25;AF=0.481;AN=52;BaseQRankSum=-1.643;DP=456;FS=0.000;HRun=0;HaplotypeScore=131.1053;InbreedingCoeff=-0.5522;MQ=24.26;MQ0=39;MQRankSum=0.857;QD=5.60;ReadPosRankSum=-4.046;VQSLOD=2.7400;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:10,2:10:25.09:25,0,34	0/1:6,1:5:27.16:27,0,86	./.	./.	0/1:9,9:15:71.53:104,0,72	0/1:20,6:20:54.65:274,0,55	1/1:17,1:11:6.09:71,6,0	0/0:24,0:19:48.08:0,48,576	0/1:19,1:14:92.60:149,0,93	0/1:30,3:27:99:133,0,511	0/1:10,9:18:82.17:281,0,82	0/1:15,2:10:9.71:10,0,129	0/1:18,3:14:50.15:50,0,164	0/1:17,3:13:99:117,0,160	0/1:21,8:22:99:186,0,189	0/1:15,3:12:77.43:98,0,77	0/0:9,0:3:3.01:0,3,36	0/1:6,1:5:23.69:24,0,106	0/0:3,0:2:3.01:0,3,37	0/1:20,6:22:77.54:183,0,78	1/1:3,0:2:3.01:35,3,0	0/1:14,2:13:38.01:38,0,44	0/1:6,4:7:20.05:20,0,52	1/1:10,2:8:12.04:168,12,0	0/0:17,0:13:20.87:0,21,232	0/1:24,5:24:99:122,0,415	0/1:14,8:18:28.45:200,0,28	0/1:8,1:8:32.72:33,0,152
chr10	9764521	.	A	AAG	672.39	PASS	AB=0.944;AC=17;AF=0.327;AN=52;BaseQRankSum=-0.010;DP=452;FS=3.047;HRun=0;HaplotypeScore=151.0758;InbreedingCoeff=-0.3744;MQ=23.75;MQ0=38;MQRankSum=0.394;QD=2.32;ReadPosRankSum=-3.139;VQSLOD=2.1628;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:10,1:9:2.43:2,0,68	0/0:7,0:5:0.23:0,0,126	./.	./.	0/1:18,1:16:3.13:3,0,145	0/1:20,5:19:99:177,0,117	0/0:17,0:10:5.44:0,5,25	0/0:21,0:16:38.62:0,39,574	0/1:19,0:14:51.70:52,0,132	0/1:31,1:26:56.88:57,0,752	0/1:19,0:18:99:152,0,190	0/0:16,1:10:1.87:0,2,171	0/0:21,0:14:13.54:0,14,292	0/1:18,1:12:16.04:16,0,223	0/1:25,3:22:76.64:77,0,287	0/1:19,0:13:45.55:46,0,132	0/0:9,0:3:3.01:0,3,46	0/1:7,1:6:22.51:23,0,168	0/0:5,0:4:10.99:0,11,79	0/0:27,0:24:8.50:0,9,171	1/1:3,0:2:2.12:22,2,0	0/1:16,0:13:27.70:28,0,85	0/1:8,1:6:7.33:7,0,105	0/1:11,0:7:4.07:19,0,4	0/0:18,0:14:21.05:0,21,281	0/1:26,2:23:41.41:41,0,654	0/1:21,2:19:78.76:90,0,79	0/0:9,0:8:4.53:0,5,173
chr10	9764536	.	GAAA	G	391.01	PASS	AB=0.947;AC=15;AF=0.288;AN=52;BaseQRankSum=0.998;DP=479;FS=4.148;HRun=3;HaplotypeScore=187.2648;InbreedingCoeff=-0.2751;MQ=25.79;MQ0=44;MQRankSum=-0.430;QD=1.51;ReadPosRankSum=4.300;VQSLOD=0.0819;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:14,0:12:5.44:5,0,32	0/1:5,2:5:28.57:29,0,40	./.	./.	0/0:17,0:16:19.22:0,19,149	0/0:25,0:19:14.62:0,15,216	0/0:18,0:12:12:0,12,134	0/1:23,0:16:22.91:23,0,45	0/0:22,0:16:6.65:0,7,281	0/1:35,1:31:94.46:94,0,245	0/1:13,1:13:28.23:28,0,126	0/0:18,0:12:5.93:0,6,124	0/1:22,3:18:35.38:35,0,171	0/1:22,2:17:99:106,0,161	0/1:26,5:26:91.86:92,0,185	0/1:20,1:17:30.41:30,0,214	0/0:9,0:4:6.02:0,6,96	0/1:8,0:6:0.34:0,0,170	0/1:13,0:7:16.31:16,0,139	0/1:24,0:24:27.18:27,0,121	0/1:3,0:3:8.25:8,0,35	0/0:20,0:17:3.76:0,4,214	0/0:9,2:10:19.14:0,19,155	1/1:8,1:5:3.01:39,3,0	0/0:19,0:16:24.17:0,24,265	0/0:26,0:23:55.08:0,55,600	0/0:16,0:13:12.58:0,13,68	0/0:10,0:9:15.52:0,16,258
chr10	9764565	.	AAAGGAAGGAAGGAAGG	A	1550.88	PASS	AB=0.876;AC=3;AF=0.056;AN=54;BaseQRankSum=-5.976;DP=511;FS=12.921;HRun=0;HaplotypeScore=319.7241;InbreedingCoeff=-0.0639;MQ=31.89;MQ0=26;MQRankSum=3.981;QD=25.42;ReadPosRankSum=-0.153;VQSLOD=1.0726;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:17:39.13:0,39,1041	0/0:8,0:8:24.08:0,24,817	./.	0/0:3,0:2:6.02:0,6,157	0/0:17,0:17:45.15:0,45,1508	0/0:26,0:21:45.15:0,45,1396	0/0:21,0:17:30.10:0,30,821	0/0:24,0:20:60.20:0,60,1583	0/0:20,0:14:39.13:0,39,1309	0/0:32,0:30:84.29:0,84,2575	0/0:14,0:13:30.10:0,30,850	0/0:22,0:18:51.12:0,51,1462	0/0:20,0:19:48.16:0,48,1549	0/0:20,0:19:48.16:0,48,1451	0/0:35,0:33:87.21:0,87,2725	0/0:18,0:16:42.14:0,42,1376	0/0:12,0:7:18.06:0,18,640	0/0:10,0:8:21.01:0,21,430	0/1:20,0:14:99:432,0,246	0/1:13,19:29:99:642,0,226	0/1:9,0:8:55.31:576,0,55	0/0:17,0:16:45.15:0,45,1308	0/0:17,0:17:49.05:0,49,1321	0/0:14,0:10:18.06:0,18,462	0/0:24,0:20:48.16:0,48,2003	0/0:19,0:16:39.13:0,39,1798	0/0:18,0:15:32.32:0,32,893	0/0:20,0:19:48.16:0,48,1897
chr10	9765199	.	CAA	C	13215.15	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=2.746;DP=566;FS=5.955;HRun=8;HaplotypeScore=93.6475;InbreedingCoeff=0.9976;MQ=73.38;MQ0=0;MQRankSum=-4.367;QD=31.54;ReadPosRankSum=2.834;VQSLOD=4.9040;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,14:16:38.79:450,39,0	1/1:3,7:10:21.06:256,21,0	0/0:17,0:17:39.13:0,39,644	0/0:13,0:13:27.09:0,27,423	1/1:5,29:34:87.27:1061,87,0	0/0:22,0:22:60.20:0,60,1002	0/0:13,0:13:33.11:0,33,558	1/1:2,28:30:84.24:1011,84,0	0/0:25,0:25:72.25:0,72,1215	1/1:3,25:28:75.21:902,75,0	1/1:1,24:25:63.19:768,63,0	1/1:0,15:15:36.11:439,36,0	1/1:0,24:24:69.22:842,69,0	1/1:3,17:20:45.13:549,45,0	1/1:2,15:17:45.14:549,45,0	1/1:1,19:20:51.16:622,51,0	1/1:0,18:18:45.14:549,45,0	1/1:1,10:11:27.08:325,27,0	0/0:2,0:26:57.62:0,58,218	0/0:2,0:20:39.93:0,40,140	0/0:2,0:11:19.96:0,20,70	1/1:3,18:21:48.15:585,48,0	1/1:0,27:27:81.25:988,81,0	1/1:0,8:8:24.08:293,24,0	1/1:2,19:21:54.17:659,54,0	1/1:2,28:30:84.19:982,84,0	1/1:1,31:32:81.09:983,81,0	1/1:1,11:12:33.10:402,33,0
chr10	9765523	.	T	TG	341.42	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.888;DP=553;FS=2.296;HRun=1;HaplotypeScore=67.8253;InbreedingCoeff=0.9889;MQ=80.70;MQ0=0;MQRankSum=-7.744;QD=8.75;ReadPosRankSum=0.460;VQSLOD=0.9959;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:42.13:0,42,538	0/0:10,0:10:30.08:0,30,374	0/0:16,0:16:47.17:0,47,562	0/0:17,0:17:39.59:0,40,476	0/0:38,0:38:99:0,114,1451	0/0:35,0:35:99:0,99,1257	0/0:16,0:16:45.15:0,45,584	0/0:25,0:25:75.24:0,75,962	0/0:24,0:24:69.21:0,69,881	0/0:30,0:30:90.29:0,90,1169	0/0:23,0:23:69.22:0,69,896	0/0:15,0:15:42.14:0,42,545	0/0:18,0:18:54.18:0,54,701	0/0:17,0:17:51.17:0,51,662	0/0:28,0:28:84.27:0,84,1091	0/0:19,0:19:57.19:0,57,740	0/0:14,0:14:39.13:0,39,506	0/0:13,0:13:33.10:0,33,428	1/1:7,0:7:20.11:107,20,0	1/1:19,3:22:53.32:276,53,0	1/1:8,2:10:14.76:98,15,0	0/0:19,0:19:57.19:0,57,740	0/0:24,0:24:72.22:0,72,921	0/0:19,0:19:57.19:0,57,740	0/0:17,0:17:51.17:0,51,662	0/0:34,0:34:99:0,102,1313	0/0:22,0:22:66.21:0,66,856	0/0:6,0:6:18.03:0,18,217
chr10	9765524	.	GAT	G	756.48	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.041;DP=558;FS=4.323;HRun=0;HaplotypeScore=78.5697;InbreedingCoeff=0.9922;MQ=81.93;MQ0=0;MQRankSum=-8.416;QD=20.45;ReadPosRankSum=0.243;VQSLOD=3.3621;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:45.15:0,45,891	0/0:10,0:10:30.09:0,30,561	0/0:18,0:18:50.16:0,50,867	0/0:17,0:17:44.52:0,45,737	0/0:39,0:39:99:0,117,2318	0/0:35,0:35:99:0,102,2014	0/0:17,0:17:48.16:0,48,950	0/0:26,0:26:78.26:0,78,1528	0/0:24,0:24:69.24:0,69,1390	0/0:30,0:30:90.31:0,90,1825	0/0:23,0:23:69.24:0,69,1402	0/0:16,0:16:48.16:0,48,951	0/0:18,0:18:54.19:0,54,1097	0/0:17,0:17:51.18:0,51,1036	0/0:28,0:28:84.29:0,84,1707	0/0:19,0:19:57.20:0,57,1158	0/0:14,0:14:39.13:0,39,792	0/0:13,0:13:36.12:0,36,706	1/1:0,6:6:18.04:187,18,0	1/1:3,18:21:60:555,60,0	1/1:2,8:10:20.17:155,20,0	0/0:19,0:19:57.20:0,57,1158	0/0:24,0:24:72.25:0,72,1462	0/0:19,0:19:57.20:0,57,1158	0/0:17,0:17:51.18:0,51,1036	0/0:34,0:34:99:0,102,2073	0/0:22,0:22:66.23:0,66,1338	0/0:6,0:6:18.06:0,18,365
chr10	9765527	.	GCTGTAC	G	1620.29	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.409;DP=562;FS=3.231;HRun=0;HaplotypeScore=123.1384;InbreedingCoeff=0.9920;MQ=82.43;MQ0=0;MQRankSum=-8.647;QD=47.66;ReadPosRankSum=0.707;VQSLOD=3.5823;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:48.11:0,48,1653	0/0:8,0:8:24.08:0,24,903	0/0:18,0:18:37.18:0,37,1509	0/0:18,0:18:49.63:0,50,1528	0/0:39,0:39:99:0,117,4024	0/0:36,0:36:99:0,105,3835	0/0:18,0:18:51.18:0,51,1813	0/0:26,0:26:78.27:0,78,2840	0/0:24,0:24:69.21:0,69,2407	0/0:31,0:31:93.31:0,93,3356	0/0:23,0:23:69.22:0,69,2446	0/0:17,0:17:51.18:0,51,1882	0/0:18,0:18:54.16:0,54,1760	0/0:18,0:18:54.19:0,54,1993	0/0:28,0:28:84.29:0,84,3148	0/0:19,0:19:57.20:0,57,2131	0/0:16,0:16:42.14:0,42,1562	0/0:13,0:13:36.11:0,36,1247	1/1:0,6:6:18.06:355,18,0	1/1:2,18:20:57.20:1085,57,0	1/1:0,8:8:21.05:322,21,0	0/0:19,0:19:57.18:0,57,2056	0/0:24,0:24:72.19:0,72,2487	0/0:19,0:19:57.20:0,57,2116	0/0:17,0:17:51.13:0,51,1656	0/0:35,0:35:99:0,105,3854	0/0:21,0:21:63.20:0,63,2255	0/0:6,0:6:18.06:0,18,677
chr10	9766018	.	TAAGAAAGAAAGAAAGAAAGAAAGAAAGA	T	7544.42	PASS	AB=0.891;AC=34;AF=0.630;AN=54;BaseQRankSum=6.809;DP=307;FS=37.116;HRun=0;HaplotypeScore=203.6277;InbreedingCoeff=0.4055;MQ=66.45;MQ0=3;MQRankSum=-0.565;QD=35.59;ReadPosRankSum=-0.046;VQSLOD=2.6906;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:12,4:16:99:421,0,302	1/1:0,1:1:3.01:217,3,0	0/0:11,0:11:12.01:0,12,252	0/0:8,0:6:4.25:0,4,29	1/1:11,5:15:13.69:874,14,0	0/0:11,0:10:21.06:0,21,1833	0/0:9,0:9:9.03:0,9,1013	0/0:18,0:17:3.01:0,3,300	0/0:11,0:10:24.08:0,24,2252	1/1:17,3:20:9.02:459,9,0	1/1:9,6:15:9.03:113,9,0	1/1:5,2:7:3.01:217,3,0	1/1:6,6:12:12.04:866,12,0	1/1:3,4:7:6.02:433,6,0	1/1:3,3:6:3.01:189,3,0	1/1:5,2:7:3.01:217,3,0	0/1:17,0:17:53.89:54,0,1194	0/1:9,4:12:99:205,0,798	./.	0/0:17,0:15:39.13:0,39,4394	0/0:5,0:5:9.03:0,9,748	1/1:6,3:9:3.01:209,3,0	1/1:13,4:17:12.04:848,12,0	0/1:12,0:11:88.57:89,0,394	1/1:4,1:5:3.01:217,3,0	1/1:8,6:14:18.01:643,18,0	1/1:8,5:13:12.93:843,13,0	1/1:3,2:5:6.02:433,6,0
chr10	9766163	.	A	AG	245.73	PASS	AB=0.877;AC=12;AF=0.222;AN=54;BaseQRankSum=7.148;DP=432;FS=1.903;HRun=0;HaplotypeScore=93.6040;InbreedingCoeff=-0.2615;MQ=49.41;MQ0=14;MQRankSum=-5.012;QD=1.25;ReadPosRankSum=-5.833;VQSLOD=0.2632;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:19:42.99:0,43,604	0/1:6,2:8:38.47:38,0,82	0/1:22,0:5:6.61:7,0,54	0/0:13,0:7:13.27:0,13,95	0/0:21,0:19:30.87:0,31,514	0/0:13,2:13:3.38:0,3,385	0/0:13,3:12:6.44:0,6,239	0/0:28,0:23:64.02:0,64,805	0/1:14,1:13:7.05:7,0,367	0/1:21,6:22:99:104,0,435	0/1:24,6:29:59.28:59,0,553	0/1:7,1:8:5.39:5,0,99	0/1:15,0:13:14.39:14,0,357	0/1:15,3:18:40.13:40,0,334	0/0:13,0:12:36.05:0,36,462	0/0:10,1:11:17.01:0,17,402	0/1:10,2:11:7.03:7,0,203	0/1:4,3:7:27.44:27,0,36	0/0:1,0:1:1.25:0,1,3	0/0:1,0:1:1.55:0,2,4	./.	0/1:13,2:15:47.43:47,0,259	0/0:21,2:21:39.09:0,39,520	0/1:19,1:16:26.03:26,0,358	0/0:21,0:21:33.22:0,33,451	0/0:20,0:19:5.05:0,5,338	0/0:25,0:23:54.22:0,54,631	0/0:3,0:3:6.02:0,6,83
chr10	9766275	.	T	TAA	2012.20	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-6.570;DP=571;FS=9.987;HRun=2;HaplotypeScore=80.7155;InbreedingCoeff=0.9662;MQ=74.76;MQ0=0;MQRankSum=0.611;QD=45.73;ReadPosRankSum=0.111;VQSLOD=2.4125;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:78.26:0,78,1148	0/0:14,0:14:42.08:0,42,574	0/0:12,0:13:6.53:0,7,339	0/0:23,0:23:53.97:0,54,690	0/0:34,0:34:90.30:0,90,1323	0/0:17,0:17:48.15:0,48,687	0/0:15,0:15:39.13:0,39,567	0/0:36,0:36:99:0,105,1492	0/0:24,0:23:63.21:0,63,925	0/0:23,0:23:63.21:0,63,907	0/0:21,0:21:57.19:0,57,838	0/0:15,0:15:36.12:0,36,529	0/0:13,0:12:36.10:0,36,508	0/0:20,0:20:54.18:0,54,792	0/0:23,0:23:69.23:0,69,1014	0/0:18,0:18:54.18:0,54,795	0/0:25,0:25:66.17:0,66,927	0/0:14,0:14:36.08:0,36,506	1/1:1,11:11:30.10:561,30,0	1/1:2,17:19:51.13:919,51,0	1/1:0,13:13:36.12:674,36,0	0/0:10,0:10:27.08:0,27,377	0/0:19,0:19:51.14:0,51,728	0/0:20,0:20:57.19:0,57,839	0/0:22,0:22:66.20:0,66,934	0/0:26,0:26:69.18:0,69,974	0/0:27,0:27:75.24:0,75,1082	0/0:28,0:28:75.25:0,75,1102
chr10	9766526	.	ACATG	A	751.61	PASS	AB=0.624;AC=4;AF=0.071;AN=56;BaseQRankSum=8.590;DP=730;FS=13.202;HRun=0;HaplotypeScore=182.6444;InbreedingCoeff=0.4599;MQ=64.05;MQ0=0;MQRankSum=-7.650;QD=15.66;ReadPosRankSum=-1.027;VQSLOD=2.1783;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,129,3703	0/0:11,0:11:33.11:0,33,956	0/0:29,0:27:78.26:0,78,1989	0/0:29,0:27:78.27:0,78,2093	0/0:24,0:24:63.22:0,63,1824	0/0:26,0:25:78.27:0,78,2248	0/0:37,0:37:99:0,111,3084	0/0:27,0:28:81.28:0,81,2283	0/0:31,0:31:93.32:0,93,2628	0/0:22,0:22:63.22:0,63,1775	0/0:17,0:17:48.16:0,48,1374	0/0:26,0:26:78.27:0,78,2140	0/0:36,0:36:99:0,108,2968	0/0:35,0:35:99:0,105,2973	0/0:35,0:35:99:0,105,2878	0/0:29,0:29:87.30:0,87,2476	0/0:30,0:30:90.31:0,90,2552	0/0:13,0:13:39.13:0,39,1090	0/1:7,10:17:67.06:387,0,67	0/1:5,8:13:41.88:205,0,42	1/1:7,11:18:23.94:274,24,0	0/0:26,0:26:72.25:0,72,2085	0/0:20,0:18:45.15:0,45,1252	0/0:41,0:41:99:0,123,3527	0/0:24,0:24:69.24:0,69,1901	0/0:32,0:32:96.30:0,96,2557	0/0:22,0:22:63.22:0,63,1744	0/0:15,0:15:45.15:0,45,1184
chr10	9766651	.	AG	A	2427.81	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-1.174;DP=661;FS=5.624;HRun=2;HaplotypeScore=90.7743;InbreedingCoeff=0.9987;MQ=89.37;MQ0=0;MQRankSum=-1.718;QD=33.26;ReadPosRankSum=1.050;VQSLOD=3.5980;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,128,1848	0/0:9,0:9:24.06:0,24,320	0/0:29,0:29:84.28:0,84,1258	0/0:24,0:23:66:0,66,868	0/0:13,0:13:39.11:0,39,544	1/1:0,22:22:63.20:818,63,0	1/1:1,23:24:57.19:740,57,0	0/0:18,0:18:51.17:0,51,758	1/1:0,27:27:78.25:1013,78,0	0/0:25,0:25:69.23:0,69,1033	0/0:19,0:19:51.16:0,51,745	0/0:27,0:27:78.26:0,78,1169	0/0:31,0:31:93.29:0,93,1369	0/0:37,0:37:99:0,111,1625	0/0:30,0:30:90.30:0,90,1348	0/0:27,0:27:78.26:0,78,1168	0/0:25,0:25:75.24:0,75,1105	0/0:13,0:13:33.10:0,33,474	0/0:18,0:18:54.18:0,54,806	0/0:15,0:15:39.13:0,39,584	0/0:45,0:45:99:0,108,1597	0/0:17,0:17:51.16:0,51,743	0/0:13,0:13:39.13:0,39,580	0/0:33,0:33:93.27:0,93,1369	0/0:17,0:17:51.17:0,51,764	0/0:23,0:23:69.22:0,69,1015	0/0:26,0:26:78.26:0,78,1146	0/0:9,0:9:27.09:0,27,404
chr10	9766796	.	C	CA	1054.70	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=6.766;DP=537;FS=2.795;HRun=4;HaplotypeScore=126.7315;InbreedingCoeff=0.9677;MQ=74.84;MQ0=1;MQRankSum=-7.336;QD=22.44;ReadPosRankSum=-1.150;VQSLOD=2.0137;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:96.12:0,96,1027	0/0:9,0:9:17.80:0,18,200	0/0:30,0:23:26.36:0,26,385	0/0:15,0:13:16.18:0,16,158	0/0:30,0:30:75.11:0,75,803	0/0:22,0:22:54.10:0,54,584	0/0:18,0:18:45.13:0,45,504	0/0:28,0:28:63.11:0,63,669	0/0:14,0:14:27.07:0,27,300	0/0:23,0:23:66.18:0,66,726	0/0:18,0:18:38.96:0,39,421	0/0:12,0:12:29.96:0,30,306	0/0:13,0:13:32.93:0,33,310	0/0:20,0:20:54.11:0,54,587	0/0:29,0:29:78.11:0,78,830	0/0:16,0:16:39.10:0,39,427	0/0:22,0:22:48.12:0,48,525	0/0:10,0:10:30.08:0,30,334	1/1:6,14:20:23.01:538,23,0	1/1:5,17:22:56.99:562,57,0	1/1:1,4:5:8.85:92,9,0	0/0:22,0:22:48.08:0,48,513	0/0:20,0:20:42.10:0,42,452	0/0:11,0:11:27.02:0,27,277	0/0:18,0:18:45.01:0,45,470	0/0:22,0:22:63.17:0,63,701	0/0:21,0:21:57.09:0,57,607	0/0:10,0:10:27.08:0,27,300
chr10	9766800	.	ATGG	A	4630.05	PASS	AB=0.990;AC=34;AF=0.607;AN=56;BaseQRankSum=3.365;DP=517;FS=1.198;HRun=0;HaplotypeScore=128.1607;InbreedingCoeff=0.0753;MQ=73.37;MQ0=1;MQRankSum=-2.939;QD=10.97;ReadPosRankSum=10.458;VQSLOD=2.9353;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:33,1:34:54.18:409,0,54	0/1:9,0:9:2.70:81,0,3	0/0:29,0:21:52.29:0,52,737	0/0:17,0:15:44.32:0,44,541	0/1:28,0:28:29.74:318,0,30	0/0:21,0:21:29.97:0,30,306	0/0:17,0:17:44.06:0,44,302	0/1:25,1:28:94.53:252,0,95	0/0:11,0:11:14.96:0,15,126	0/1:22,0:22:19.28:244,0,19	1/1:18,0:18:6.58:238,7,0	1/1:11,1:12:11.05:168,11,0	0/1:12,0:12:17.80:125,0,18	0/1:19,0:19:18.61:195,0,19	0/1:29,0:29:66.22:252,0,66	1/1:14,0:14:19.52:181,20,0	1/1:19,0:19:24.58:213,25,0	0/1:10,0:10:16.10:94,0,16	1/1:21,0:21:7.34:205,7,0	1/1:23,0:23:31.62:233,32,0	1/1:4,0:4:5.14:25,5,0	0/1:22,0:22:47.19:198,0,47	1/1:16,0:16:21.71:260,22,0	0/1:11,0:11:16.95:79,0,17	1/1:17,1:18:18.70:254,19,0	1/1:23,0:23:7.61:255,8,0	1/1:21,0:21:13.97:269,14,0	0/1:9,0:9:13.84:83,0,14
chr10	9766801	.	TGGG	T	12368.96	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-8.951;DP=509;FS=2.400;HRun=11;HaplotypeScore=102.7783;InbreedingCoeff=0.9546;MQ=72.70;MQ0=1;MQRankSum=-4.330;QD=29.80;ReadPosRankSum=5.278;VQSLOD=4.1860;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,26:34:78.16:1020,78,0	1/1:1,8:9:17.98:236,18,0	0/0:28,0:20:43.29:0,43,626	0/0:17,0:15:36.31:0,36,474	1/1:5,23:28:63.16:822,63,0	0/0:5,0:21:12.34:0,12,52	0/0:6,0:17:14.21:0,14,48	1/1:11,16:27:47.06:658,47,0	0/0:0,0:11:11.99:0,12,27	1/1:3,19:22:57.17:749,57,0	1/1:4,14:18:45.13:577,45,0	1/1:2,10:12:27.08:354,27,0	1/1:1,10:11:27.07:355,27,0	1/1:4,15:19:45.13:591,45,0	1/1:5,23:28:60.18:788,60,0	1/1:1,13:14:36.11:473,36,0	1/1:2,17:19:48.11:611,48,0	1/1:2,8:10:24.07:315,24,0	1/1:5,16:21:48.01:491,48,0	1/1:5,18:23:51.05:513,51,0	1/1:1,3:4:6.46:55,6,0	1/1:5,16:21:42.13:551,42,0	1/1:4,12:16:45.14:584,45,0	1/1:0,9:9:21.07:276,21,0	1/1:4,14:18:42.13:550,42,0	1/1:3,20:23:63.17:814,63,0	1/1:1,19:20:54.17:709,54,0	1/1:1,8:9:21.06:276,21,0
chr10	9766810	.	GGGT	G	5198.85	PASS	AB=0.988;AC=40;AF=0.714;AN=56;BaseQRankSum=0.464;DP=481;FS=5.846;HRun=0;HaplotypeScore=120.7015;InbreedingCoeff=0.4194;MQ=70.14;MQ0=1;MQRankSum=-1.673;QD=13.20;ReadPosRankSum=10.741;VQSLOD=2.4835;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:32,1:33:20.93:437,0,21	1/1:8,0:8:17.27:101,17,0	0/0:24,0:16:7.15:0,7,553	0/0:16,0:15:39.28:0,39,512	1/1:25,1:26:24.61:406,25,0	0/0:17,0:17:23.31:0,23,134	0/0:15,0:15:35.91:0,36,193	0/1:25,0:25:99:227,0,101	0/0:14,0:14:34.83:0,35,176	1/1:20,0:19:38.40:318,38,0	1/1:15,3:18:34.83:324,35,0	1/1:11,0:11:26.21:166,26,0	1/1:10,0:10:26.23:167,26,0	1/1:16,0:16:22.39:227,22,0	1/1:23,0:23:58.12:357,58,0	1/1:13,0:13:34.53:196,35,0	0/1:23,1:24:81.11:215,0,81	1/1:9,0:9:0.80:95,1,0	0/1:21,0:21:61.12:132,0,61	1/1:20,0:20:30.06:192,30,0	0/1:4,0:4:9.90:11,0,10	1/1:16,0:16:41.14:289,41,0	1/1:15,3:18:5.12:305,5,0	0/1:11,0:11:21.59:96,0,22	1/1:16,1:17:19.48:227,19,0	1/1:22,1:23:13.50:305,14,0	1/1:20,0:20:36.24:294,36,0	1/1:8,0:8:20.27:114,20,0
chr10	9768780	.	G	GACACACACACACAC	22039.47	PASS	AB=0.636;AC=43;AF=0.768;AN=56;BaseQRankSum=-5.475;DP=780;FS=1.014;HRun=0;HaplotypeScore=305.8470;InbreedingCoeff=0.6410;MQ=62.51;MQ0=5;MQRankSum=-11.923;QD=36.73;ReadPosRankSum=-2.160;VQSLOD=3.5557;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:38,0:36:10.73:218,11,0	1/1:14,0:14:9.95:191,10,0	0/0:45,0:31:20.20:0,20,940	0/0:55,0:45:18.58:0,19,1271	1/1:27,0:27:5.57:190,6,0	0/0:5,0:26:60.14:0,60,1137	0/0:4,0:24:50.74:0,51,1003	1/1:25,0:25:39.13:1663,39,0	0/0:6,0:29:29.64:0,30,1168	1/1:17,16:34:63.96:3210,64,0	1/1:10,12:23:5.46:405,5,0	1/1:16,13:33:42.03:2531,42,0	1/1:13,11:24:22.63:1168,23,0	1/1:15,6:22:14.94:908,15,0	1/1:16,14:33:27.56:1649,28,0	0/1:13,18:34:80.41:2064,0,80	0/1:10,11:21:1.63:403,0,2	1/1:11,0:11:21.07:916,21,0	1/1:12,0:19:27.09:1122,27,0	1/1:26,0:41:7.93:538,8,0	1/1:31,0:28:3.01:69,3,0	1/1:16,15:32:8.26:548,8,0	0/1:8,9:18:0:0,0,0	1/1:14,12:27:0.62:2,1,0	1/1:6,0:22:5.84:366,6,0	1/1:27,0:26:54.18:2059,54,0	1/1:16,0:26:30.57:1489,31,0	1/1:9,0:10:6.02:332,6,0
chr10	9769192	.	C	CAT	7738.74	PASS	AB=0.644;AC=25;AF=0.446;AN=56;BaseQRankSum=-12.515;DP=620;FS=2.669;HRun=0;HaplotypeScore=89.4846;InbreedingCoeff=0.5051;MQ=76.01;MQ0=1;MQRankSum=0.628;QD=24.11;ReadPosRankSum=-1.034;VQSLOD=5.0253;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:80.85:0,81,984	0/0:15,0:15:36.09:0,36,425	0/0:32,0:23:22.51:0,23,211	0/1:34,0:24:15.08:15,0,35	0/0:36,0:36:72.18:0,72,860	1/1:5,8:13:15.05:248,15,0	0/1:6,15:20:1.40:509,0,1	1/1:10,26:37:81.22:1241,81,0	0/0:19,0:19:39.11:0,39,475	1/1:4,11:16:1.55:469,2,0	0/1:8,16:24:1.43:508,0,1	0/1:6,13:19:32.92:543,0,33	0/1:3,8:11:19.47:230,0,19	1/1:3,19:21:42.09:694,42,0	1/1:5,8:13:18.06:297,18,0	0/1:2,14:17:1.44:509,0,1	0/1:13,19:33:91.96:684,0,92	1/1:5,14:19:4.63:597,5,0	0/0:27,0:28:50.83:0,51,545	0/0:22,0:23:47.98:0,48,577	0/0:24,0:24:60.19:0,60,749	1/1:3,10:13:21.07:347,21,0	1/1:2,13:16:1.60:551,2,0	1/1:4,9:13:18.06:298,18,0	0/0:20,0:20:42.13:0,42,525	0/0:21,0:21:51.16:0,51,638	0/0:35,0:33:81.17:0,81,943	0/0:17,0:17:30.10:0,30,375
chr10	9770481	.	GTCTA	G	4599.65	PASS	AB=1.000;AC=32;AF=0.571;AN=56;BaseQRankSum=-2.839;DP=713;FS=0.393;HRun=0;HaplotypeScore=268.5844;InbreedingCoeff=0.0649;MQ=43.79;MQ0=5;MQRankSum=0.727;QD=8.35;ReadPosRankSum=-2.840;VQSLOD=3.1852;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:29,8:37:51.30:556,51,0	0/0:11,0:11:11.02:0,11,224	0/0:39,0:27:57.95:0,58,943	0/0:24,0:17:41.88:0,42,539	1/1:21,10:32:17.21:181,17,0	0/0:20,0:20:44.15:0,44,731	0/0:29,0:28:46.19:0,46,746	0/1:32,0:32:61.54:192,0,62	0/0:39,0:39:77.22:0,77,1348	0/1:44,0:43:99:174,0,478	1/1:17,0:17:5.28:48,5,0	0/1:23,0:23:99:122,0,111	0/1:27,0:27:87.84:88,0,268	0/1:28,0:28:66.92:67,0,227	0/1:42,0:42:13.86:14,0,181	0/1:30,0:30:72.09:72,0,260	0/1:19,0:19:50.23:50,0,63	0/1:10,0:10:35.51:58,0,36	1/1:24,0:23:13.29:334,13,0	1/1:21,0:21:3.60:304,4,0	1/1:21,0:21:29.24:323,29,0	0/1:22,0:22:24.54:25,0,75	0/1:28,0:28:40.12:40,0,89	0/1:23,0:23:17.11:17,0,20	1/1:15,2:17:35.20:374,35,0	1/1:21,9:30:69.04:927,69,0	1/1:13,7:20:47.99:582,48,0	1/1:1,3:4:3.01:52,3,0
chr10	9770485	.	A	ATCTG	5816.98	PASS	AB=0.974;AC=36;AF=0.643;AN=56;BaseQRankSum=2.408;DP=720;FS=4.659;HRun=0;HaplotypeScore=279.1673;InbreedingCoeff=0.2172;MQ=43.81;MQ0=5;MQRankSum=-1.281;QD=9.98;ReadPosRankSum=-0.518;VQSLOD=3.4447;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:36,0:36:32.76:33,0,65	1/1:5,6:11:27.02:376,27,0	0/0:38,0:26:52.77:0,53,965	0/0:28,0:20:50.87:0,51,684	0/1:34,0:34:8.97:55,0,9	0/1:19,0:20:99:113,0,136	0/1:28,0:27:99:99,0,253	1/1:31,0:32:57.69:504,58,0	0/1:37,0:37:99:249,0,310	1/1:37,6:42:26.38:880,26,0	1/1:13,4:17:1.53:18,2,0	1/1:23,1:24:29.49:394,29,0	1/1:19,8:27:51.83:699,52,0	1/1:24,5:29:34.43:395,34,0	1/1:36,7:43:56.35:495,56,0	1/1:23,8:31:13.46:467,13,0	0/1:14,5:19:6.78:167,0,7	1/1:7,2:9:12.84:140,13,0	0/0:27,0:26:20.95:0,21,690	0/0:22,0:22:41.60:0,42,557	0/0:22,0:21:18.14:0,18,381	1/1:17,5:22:23:236,23,0	1/1:22,8:30:21.39:192,21,0	1/1:18,5:23:15.09:118,15,0	0/1:16,0:16:13.28:13,0,77	0/1:30,0:30:99:132,0,211	0/1:18,0:18:24.22:24,0,161	0/1:4,0:4:8.92:18,0,9
chr10	9770493	.	A	ATCTG	7163.88	PASS	AB=1.000;AC=38;AF=0.679;AN=56;BaseQRankSum=0.127;DP=741;FS=6.352;HRun=0;HaplotypeScore=310.6043;InbreedingCoeff=0.4583;MQ=41.50;MQ0=6;MQRankSum=-0.954;QD=11.88;ReadPosRankSum=1.458;VQSLOD=3.5197;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:40,0:39:6.44:6,0,77	1/1:12,0:12:27.02:374,27,0	0/0:39,0:27:50.84:0,51,448	0/0:30,0:20:32.87:0,33,304	0/1:33,0:33:13.26:14,0,13	1/1:13,6:19:35.84:601,36,0	1/1:21,6:26:33.05:549,33,0	1/1:29,0:29:59.63:447,60,0	1/1:28,9:37:59.30:1092,59,0	1/1:40,0:39:38.71:845,39,0	1/1:22,0:22:7.38:64,7,0	1/1:23,0:23:23.45:339,23,0	1/1:27,0:27:44.92:630,45,0	1/1:29,0:29:35.49:396,35,0	1/1:44,0:44:50.06:445,50,0	1/1:35,0:35:14.86:471,15,0	0/1:20,0:20:11:129,0,11	1/1:10,0:10:11.88:135,12,0	0/1:29,0:28:99:102,0,160	0/0:22,0:22:13.85:0,14,132	0/0:23,0:22:15.80:0,16,131	1/1:22,0:22:22.94:238,23,0	1/1:34,0:34:15.20:143,15,0	1/1:22,0:22:6.14:51,6,0	0/0:21,0:21:10.09:0,10,86	0/1:27,0:27:74.25:74,0,186	0/1:22,0:22:19.82:20,0,130	0/0:3,0:3:2.74:0,3,12
chr10	9770522	.	TCC	T	796.83	PASS	AB=0.815;AC=5;AF=0.089;AN=56;BaseQRankSum=1.640;DP=684;FS=0.739;HRun=2;HaplotypeScore=341.7582;InbreedingCoeff=0.1891;MQ=40.15;MQ0=5;MQRankSum=-2.530;QD=9.27;ReadPosRankSum=3.143;VQSLOD=0.1661;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:23,9:31:20.97:21,0,44	0/0:11,0:11:27.08:0,27,320	0/0:33,0:19:47.35:0,47,803	0/0:33,0:21:50.03:0,50,840	0/0:21,7:28:0.79:0,1,3	0/0:20,0:20:35.68:0,36,514	0/0:24,0:24:26.88:0,27,422	0/0:34,0:34:98.93:0,99,1508	0/0:34,0:34:74.05:0,74,1063	0/0:32,0:32:80.03:0,80,1101	0/0:20,0:20:4.94:0,5,119	0/0:23,0:23:23.63:0,24,287	0/0:25,0:25:48.10:0,48,634	0/0:24,0:24:23.67:0,24,298	0/0:43,0:43:26.56:0,27,263	0/0:27,0:27:33.06:0,33,419	0/0:17,0:17:21.43:0,21,279	0/0:8,0:8:11.99:0,12,125	0/0:29,0:29:80.65:0,81,1158	0/0:19,0:19:14.63:0,15,187	0/0:17,0:16:12.67:0,13,87	0/0:26,0:26:11.57:0,12,142	0/0:34,0:34:17.60:0,18,169	0/0:19,0:19:4.91:0,5,28	0/0:14,4:18:0.75:0,1,4	0/1:21,8:29:34.33:635,0,34	0/1:19,3:22:43.70:232,0,44	1/1:3,0:3:1.60:17,2,0
chr10	9770524	.	CGTGTGTGTATGT	C	7737.44	PASS	AB=0.913;AC=37;AF=0.712;AN=52;BaseQRankSum=10.258;DP=728;FS=18.147;HRun=0;HaplotypeScore=382.3115;InbreedingCoeff=0.1170;MQ=39.76;MQ0=5;MQRankSum=-7.613;QD=12.58;ReadPosRankSum=3.773;VQSLOD=1.5250;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:20,10:30:6.96:127,7,0	./.	0/0:31,0:17:33.09:0,33,632	0/0:32,0:21:15.18:0,15,965	1/1:10,18:28:1.65:3,2,0	0/1:19,0:21:0.42:82,0,0	0/1:28,0:28:33.93:38,0,34	0/1:34,0:34:99:127,0,196	0/1:36,0:39:37.74:326,0,38	1/1:41,0:41:13.11:631,13,0	0/0:20,0:22:4.61:0,5,75	1/1:22,0:25:29.94:432,30,0	1/1:29,0:31:9.92:464,10,0	1/1:26,0:28:12.47:235,12,0	1/1:43,0:50:24.69:349,25,0	0/1:26,0:29:20.81:254,0,21	0/1:23,0:23:21.20:284,0,21	1/1:11,0:11:4.57:70,5,0	0/1:22,0:25:99:288,0,222	0/1:8,0:16:0:1,0,0	./.	0/1:26,0:29:16.98:37,0,17	1/1:34,0:38:6.45:54,6,0	1/1:19,0:19:3.07:48,3,0	1/1:4,13:17:26.98:700,27,0	1/1:14,15:29:69.23:1851,69,0	1/1:5,16:21:45.61:1300,46,0	1/1:2,0:2:3.01:38,3,0
chr10	9770526	.	T	TCC	1510.63	PASS	AB=0.986;AC=34;AF=0.607;AN=56;BaseQRankSum=3.362;DP=704;FS=1.674;HRun=0;HaplotypeScore=331.6649;InbreedingCoeff=0.1904;MQ=39.76;MQ0=5;MQRankSum=-3.166;QD=2.69;ReadPosRankSum=-6.632;VQSLOD=0.5203;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:29:12.01:24,0,12	1/1:13,0:13:23.82:202,24,0	0/0:28,0:15:39.13:0,39,630	0/0:27,0:20:43.62:0,44,765	0/1:28,0:28:0.67:1,0,1	1/1:21,0:21:16.07:144,16,0	1/1:28,0:28:11.13:70,11,0	0/0:29,0:29:77.80:0,78,1105	1/1:35,0:35:19.41:162,19,0	0/1:34,0:33:90.32:90,0,184	0/0:22,1:23:5.86:0,6,92	1/1:25,0:25:2.81:92,3,0	0/1:30,0:30:25.67:129,0,26	1/1:25,2:27:15.26:115,15,0	1/1:51,0:51:7.71:96,8,0	0/1:28,1:29:28.53:167,0,29	0/1:25,0:25:18.57:19,0,125	0/1:12,1:13:13.55:52,0,14	0/1:19,0:19:97.27:97,0,313	1/1:15,0:15:5.80:44,6,0	1/1:16,0:15:7.66:44,8,0	0/1:28,1:29:35.57:65,0,36	1/1:36,1:37:6.21:45,6,0	1/1:19,1:20:1.41:4,1,0	1/1:17,0:17:8.87:22,9,0	0/0:28,0:28:13.52:0,14,167	0/1:21,0:21:2.91:3,0,62	0/0:2,0:2:3.84:0,4,21
chr10	9770531	.	GTA	G	730.74	PASS	AB=0.980;AC=20;AF=0.385;AN=52;BaseQRankSum=8.283;DP=680;FS=7.329;HRun=0;HaplotypeScore=319.3767;InbreedingCoeff=0.3139;MQ=40.25;MQ0=5;MQRankSum=-5.986;QD=2.12;ReadPosRankSum=3.177;VQSLOD=1.2230;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:24,4:28:2.49:38,0,2	./.	0/0:26,0:13:32.98:0,33,378	0/0:30,0:19:21.84:0,22,564	0/1:27,1:28:0.03:0,0,1	0/0:20,0:20:0.57:0,1,79	0/0:28,0:28:9.73:0,10,86	0/0:26,0:26:66.03:0,66,947	0/0:34,0:34:12.52:0,13,169	0/0:36,0:35:12.62:0,13,134	0/0:23,0:23:5.56:0,6,50	0/1:25,0:25:12.09:12,0,19	0/1:31,0:31:4.75:5,0,23	1/1:28,0:28:0.47:4,0,0	0/1:50,0:50:0:2,0,0	0/0:28,0:28:0.25:0,0,21	0/1:25,0:25:5.24:5,0,40	0/0:12,0:12:0.47:0,0,1	0/1:19,0:19:49.25:49,0,264	1/1:15,0:15:1.41:2,1,0	./.	0/0:28,0:28:2.69:0,3,25	0/1:35,0:35:0.52:1,0,1	0/0:18,0:18:0.21:0,0,0	1/1:17,0:17:13.34:43,13,0	1/1:24,0:24:65.98:479,66,0	1/1:19,0:19:36.54:213,37,0	1/1:1,0:1:2.96:19,3,0
chr10	9770539	.	GTGTGTGTATGTGTGTGTATGTATGTA	G	19680	PASS	AB=0.875;AC=43;AF=0.860;AN=50;BaseQRankSum=1.520;DP=645;FS=40.521;HRun=0;HaplotypeScore=362.0959;InbreedingCoeff=0.4149;MQ=40.08;MQ0=6;MQRankSum=-3.233;QD=33.47;ReadPosRankSum=2.274;VQSLOD=2.5917;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:25:99:127,0,107	./.	0/0:15,0:5:11.97:0,12,234	0/0:19,0:12:26.49:0,26,574	0/1:35,0:35:0.30:0,0,0	0/1:8,0:20:45.13:146,0,45	1/1:4,0:26:3.01:94,3,0	1/1:29,0:28:71.86:920,72,0	1/1:10,1:32:23.67:602,24,0	1/1:4,34:37:65.42:2521,65,0	1/1:8,13:21:0.94:3,1,0	1/1:3,22:25:30.99:1602,31,0	1/1:10,22:32:23.73:1793,24,0	1/1:4,19:23:18.92:1096,19,0	1/1:14,36:50:33.11:1840,33,0	1/1:10,16:26:24.08:1382,24,0	1/1:8,16:24:21.03:991,21,0	1/1:1,13:14:3.01:210,3,0	1/1:13,0:13:27.06:759,27,0	1/1:13,0:13:4.42:93,4,0	./.	1/1:6,18:24:4.31:189,4,0	1/1:11,22:33:7.43:342,7,0	1/1:6,13:19:3.01:191,3,0	1/1:17,0:17:27.09:1196,27,0	1/1:30,0:29:63.83:1876,64,0	1/1:19,0:19:41.99:1706,42,0	./.
chr10	9770547	.	ATG	A	673.62	PASS	AB=0.960;AC=22;AF=0.440;AN=50;BaseQRankSum=4.238;DP=607;FS=6.242;HRun=0;HaplotypeScore=294.2379;InbreedingCoeff=0.1001;MQ=39.95;MQ0=6;MQRankSum=-1.393;QD=1.65;ReadPosRankSum=6.797;VQSLOD=1.2704;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:5.32:0,5,32	./.	0/0:9,0:3:6.02:0,6,90	0/0:15,0:10:4.97:0,5,151	0/1:34,0:34:0.34:1,0,0	1/1:20,0:20:3.73:16,4,0	1/1:22,0:22:0.47:1,0,0	0/1:23,3:24:88.08:88,0,239	1/1:29,0:29:14.20:70,14,0	1/1:37,0:36:11.89:142,12,0	0/1:19,0:19:0:1,0,0	0/1:25,0:25:3.69:55,0,4	1/1:29,1:30:1.32:44,1,0	0/0:23,0:23:5.59:0,6,20	0/1:47,0:47:12.23:12,0,18	0/1:25,0:25:0.64:1,0,20	1/1:20,2:22:3.94:71,4,0	0/1:16,0:16:6.34:6,0,8	0/1:4,1:7:15.12:87,0,15	0/0:9,0:12:1.90:0,2,4	./.	0/0:22,0:22:1.10:0,1,4	0/0:30,1:31:2.70:0,3,8	0/0:18,0:18:0.56:0,1,2	0/0:16,0:16:20.22:0,20,65	0/1:27,0:26:17.16:178,0,17	0/1:23,0:23:17.12:33,0,17	./.
chr10	9770553	.	GTGTATGTATGTA	G	9653.48	PASS	AB=0.830;AC=46;AF=0.958;AN=48;BaseQRankSum=1.215;DP=580;FS=3.189;HRun=0;HaplotypeScore=284.7637;InbreedingCoeff=0.1442;MQ=38.98;MQ0=6;MQRankSum=-0.313;QD=17.39;ReadPosRankSum=0.826;VQSLOD=3.5901;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:19,1:21:3.44:61,3,0	./.	./.	./.	0/1:16,17:33:0:0,0,1	0/1:17,0:17:16.11:65,0,16	1/1:22,0:22:3.01:56,3,0	1/1:25,0:23:44.82:653,45,0	1/1:27,0:27:15.05:357,15,0	1/1:35,0:34:53.65:1257,54,0	1/1:18,0:18:0.39:1,0,0	1/1:25,0:25:24.08:593,24,0	1/1:25,0:25:27.09:713,27,0	1/1:23,0:23:18.53:414,19,0	1/1:44,0:44:33.11:748,33,0	1/1:22,0:22:24.08:565,24,0	1/1:21,0:21:15.05:399,15,0	1/1:16,0:16:5.81:123,6,0	1/1:18,0:18:18.31:384,18,0	1/1:16,0:16:3:29,3,0	1/1:19,0:17:2.43:22,2,0	1/1:21,0:21:3.89:69,4,0	1/1:27,0:27:6.49:128,6,0	1/1:16,0:16:3.01:73,3,0	1/1:5,10:15:26.98:722,27,0	1/1:10,18:27:48.05:1162,48,0	1/1:10,11:21:36.06:1061,36,0	./.
chr10	9770559	.	GTA	G	4430.42	PASS	AB=0.892;AC=41;AF=0.820;AN=50;BaseQRankSum=3.995;DP=558;FS=17.648;HRun=0;HaplotypeScore=246.3858;InbreedingCoeff=0.0778;MQ=39.60;MQ0=6;MQRankSum=-0.018;QD=8.20;ReadPosRankSum=3.987;VQSLOD=2.6200;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:22:2.26:33,2,0	./.	./.	0/0:7,0:5:9.03:0,9,128	0/1:30,0:30:0.03:0,0,1	1/1:14,0:14:4.43:19,4,0	1/1:22,0:22:2.84:14,3,0	0/1:13,10:20:99:344,0,224	1/1:25,0:25:14.16:77,14,0	1/1:35,0:34:39.13:385,39,0	0/1:15,0:15:0.41:0,0,0	1/1:25,0:25:11.77:270,12,0	1/1:25,0:25:26.41:268,26,0	1/1:22,0:22:18.06:258,18,0	1/1:44,0:44:33.11:468,33,0	1/1:19,0:19:23.58:312,24,0	1/1:19,1:20:4.83:142,5,0	0/1:16,0:16:15.70:17,0,16	0/1:7,12:19:46.59:560,0,47	1/1:10,5:15:4.42:47,4,0	1/1:9,11:18:8.70:108,9,0	1/1:21,0:21:2.59:42,3,0	1/1:27,0:27:5.50:85,5,0	0/1:14,1:15:30.94:36,0,31	1/1:13,2:15:26.98:306,27,0	0/1:28,0:27:99:338,0,107	1/1:16,7:23:24.43:299,24,0	./.
chr10	9770563	.	GTA	G	3928.30	PASS	AB=0.987;AC=37;AF=0.685;AN=54;BaseQRankSum=4.854;DP=566;FS=16.680;HRun=0;HaplotypeScore=239.8056;InbreedingCoeff=0.2872;MQ=40.06;MQ0=7;MQRankSum=-1.415;QD=8.02;ReadPosRankSum=4.978;VQSLOD=2.0162;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:12,11:23:6.02:67,6,0	./.	0/0:5,0:1:2.04:0,2,6	0/0:4,0:3:9.03:0,9,120	0/1:29,1:30:0.02:0,0,1	0/0:17,0:17:6:0,6,119	0/0:24,0:24:3.88:0,4,26	0/1:25,0:22:99:376,0,191	1/1:25,0:25:2.44:7,2,0	1/1:36,0:34:46.94:432,47,0	0/1:15,0:15:0:0,0,0	1/1:25,0:25:21.60:283,22,0	1/1:25,0:25:26.66:276,27,0	1/1:21,1:22:18.06:253,18,0	1/1:44,0:44:33.11:468,33,0	1/1:19,0:19:23.62:314,24,0	1/1:20,0:20:14.29:158,14,0	0/1:15,1:16:18.67:46,0,19	0/1:19,0:19:74.38:74,0,131	1/1:15,0:15:4.09:12,4,0	0/0:20,0:18:5.61:0,6,25	1/1:21,0:21:2.58:42,3,0	1/1:26,0:26:5.50:85,5,0	0/1:15,0:15:29.96:36,0,30	1/1:16,0:16:26.49:305,26,0	0/1:28,0:27:5.51:375,0,6	1/1:24,0:24:13.11:295,13,0	1/1:1,0:1:2.98:22,3,0
chr10	9770905	.	GCA	G	2418.69	PASS	AB=1.000;AC=41;AF=0.820;AN=50;BaseQRankSum=-0.640;DP=139;FS=0.000;HRun=0;HaplotypeScore=21.9856;InbreedingCoeff=0.4835;MQ=105.32;MQ0=1;MQRankSum=-3.964;QD=23.48;ReadPosRankSum=-1.054;VQSLOD=2.9553;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,7:7:15.05:179,15,0	1/1:3,0:3:3.01:46,3,0	0/0:14,0:10:27.07:0,27,420	0/1:27,0:14:2.94:3,0,181	1/1:0,4:4:6.02:71,6,0	0/0:1,0:1:3.01:0,3,51	0/0:1,0:1:3.01:0,3,51	1/1:12,0:12:33.41:464,33,0	0/0:9,0:9:27.09:0,27,444	1/1:0,7:7:15.05:233,15,0	./.	1/1:3,0:3:9.02:117,9,0	1/1:1,0:1:3:25,3,0	1/1:2,0:2:6.02:93,6,0	1/1:7,0:7:21.07:324,21,0	1/1:2,0:2:6.02:93,6,0	1/1:2,0:2:3.01:40,3,0	1/1:2,0:2:3.01:45,3,0	1/1:0,4:4:9.03:139,9,0	1/1:2,0:2:6.02:93,6,0	1/1:1,0:1:3.01:45,3,0	./.	./.	1/1:2,0:2:6.02:91,6,0	1/1:1,2:3:6.02:72,6,0	1/1:0,4:4:12.04:150,12,0	1/1:1,4:5:12.04:154,12,0	1/1:2,0:3:8.70:84,9,0
chr10	9772425	.	CGTGTGTGTGTGTGT	C	2387.90	PASS	AB=0.950;AC=18;AF=0.409;AN=44;BaseQRankSum=2.004;DP=532;FS=0.000;HRun=0;HaplotypeScore=190.0938;InbreedingCoeff=0.5662;MQ=65.21;MQ0=14;MQRankSum=-3.442;QD=12.37;ReadPosRankSum=2.069;VQSLOD=2.5780;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:28:30.10:0,30,1263	./.	./.	./.	0/0:18,0:21:15.05:0,15,711	0/0:26,0:26:27.08:0,27,1371	0/0:19,0:19:12.50:0,13,669	0/0:21,0:21:1.82:0,2,5	0/0:23,0:23:12.16:0,12,701	./.	./.	1/1:14,3:18:11.83:344,12,0	1/1:15,6:20:9.03:349,9,0	1/1:10,3:13:3.01:105,3,0	1/1:17,5:22:12.04:467,12,0	1/1:11,4:14:6.02:228,6,0	0/1:29,0:28:99:260,0,144	1/1:14,5:17:4.13:679,4,0	0/0:17,0:17:8.46:0,8,169	0/0:10,0:10:9.03:0,9,204	0/0:25,0:25:9.03:0,9,287	1/1:13,0:13:6:54,6,0	0/1:16,2:17:5.89:55,0,6	1/1:20,5:25:0.88:2,1,0	0/0:11,0:11:9.03:0,9,343	0/0:19,0:19:18.05:0,18,494	0/0:14,0:14:4.26:0,4,92	./.
chr10	9772434	.	G	GTGTA	846.47	PASS	AB=0.737;AC=4;AF=0.071;AN=56;BaseQRankSum=3.387;DP=550;FS=15.962;HRun=0;HaplotypeScore=120.7847;InbreedingCoeff=0.5141;MQ=54.29;MQ0=18;MQRankSum=-0.238;QD=11.92;ReadPosRankSum=-0.431;VQSLOD=2.3179;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:37:65.98:0,66,563	0/0:6,0:6:8.99:0,9,74	0/0:20,0:10:20.18:0,20,229	0/0:29,0:15:35.25:0,35,415	0/0:26,0:26:53.85:0,54,438	1/1:26,0:26:27.62:470,28,0	0/1:19,1:20:10.66:228,0,11	0/0:19,0:19:50.88:0,51,433	0/1:2,21:25:6.42:263,0,6	0/0:15,0:15:44.91:0,45,392	0/0:17,0:16:32.94:0,33,269	0/0:13,0:13:26.90:0,27,237	0/0:16,0:15:32.90:0,33,280	0/0:13,0:13:15.95:0,16,137	0/0:21,0:21:48.83:0,49,421	0/0:13,0:12:18.83:0,19,171	0/0:30,0:28:44.64:0,45,332	0/0:19,0:16:25.57:0,26,329	0/0:18,0:17:37.52:0,38,316	0/0:14,0:12:26.89:0,27,210	0/0:36,0:36:65.78:0,66,524	0/0:11,0:11:20.98:0,21,175	0/0:16,0:15:16.27:0,16,208	0/0:26,0:25:11.37:0,11,93	0/0:15,0:15:35.95:0,36,297	0/0:23,0:23:65.11:0,65,505	0/0:16,0:16:29.03:0,29,228	0/0:8,0:7:14.92:0,15,113
chr10	9773825	.	A	ATG	11739.30	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-8.567;DP=641;FS=0.661;HRun=0;HaplotypeScore=73.9191;InbreedingCoeff=0.9998;MQ=68.80;MQ0=0;MQRankSum=0.176;QD=51.94;ReadPosRankSum=3.319;VQSLOD=5.9160;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,33:34:96.33:1845,96,0	0/0:11,0:11:33.11:0,33,504	0/0:18,0:18:51.16:0,51,742	0/0:10,0:10:29.97:0,30,378	1/1:0,22:22:57.20:1094,57,0	0/0:22,0:22:60.19:0,60,895	0/0:13,0:13:39.13:0,39,597	0/0:31,0:31:81.26:0,81,1199	0/0:20,0:20:60.20:0,60,919	0/0:37,0:37:99:0,108,1634	0/0:20,0:20:57.18:0,57,846	0/0:26,0:26:75.22:0,75,1105	0/0:21,0:21:60.19:0,60,896	0/0:23,0:23:66.21:0,66,986	0/0:31,0:31:90.29:0,90,1355	0/0:21,0:21:63.21:0,63,965	0/0:26,0:26:78.26:0,78,1185	0/0:27,0:26:65.29:0,65,1174	1/1:4,25:29:75.16:1229,75,0	1/1:1,21:22:63.22:1199,63,0	1/1:1,23:24:63.22:1217,63,0	0/0:23,0:23:66.20:0,66,964	0/0:19,0:19:54.18:0,54,827	0/0:16,0:16:45.15:0,45,688	1/1:0,30:30:75.26:1448,75,0	1/1:0,31:31:93.32:1797,93,0	1/1:0,22:22:66.23:1273,66,0	1/1:0,12:12:33.11:637,33,0
chr10	9775926	.	G	GA	9359.83	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-7.325;DP=625;FS=0.000;HRun=2;HaplotypeScore=60.5412;InbreedingCoeff=0.9949;MQ=89.89;MQ0=0;MQRankSum=-8.899;QD=44.57;ReadPosRankSum=1.103;VQSLOD=4.0608;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,38:39:99:1631,102,0	0/0:4,0:4:12.04:0,12,167	0/0:25,0:25:72.23:0,72,978	0/0:24,0:24:60.18:0,60,805	1/1:0,15:15:39.13:623,39,0	0/0:21,0:21:63.19:0,63,861	0/0:39,0:39:99:0,114,1557	0/0:32,0:32:90.29:0,90,1242	0/0:23,0:23:69.21:0,69,937	0/0:17,0:17:51.17:0,51,714	0/0:20,0:20:60.19:0,60,822	0/0:24,0:24:72.23:0,72,990	0/0:18,0:18:54.17:0,54,737	0/0:21,0:21:63.21:0,63,879	0/0:19,0:19:54.18:0,54,755	0/0:17,0:17:51.17:0,51,713	0/0:31,0:31:93.30:0,93,1276	0/0:22,0:22:66.22:0,66,923	1/1:2,21:23:69.23:1092,69,0	1/1:0,10:10:30.10:478,30,0	1/1:0,24:24:69.24:1103,69,0	0/0:16,0:16:48.16:0,48,671	0/0:24,0:24:69.23:0,69,963	0/0:18,0:18:51.17:0,51,713	1/1:0,20:20:60.20:959,60,0	1/1:0,38:38:99:1794,114,0	1/1:0,28:27:78.27:1247,78,0	1/1:0,13:13:27.09:432,27,0
chr10	9777409	.	C	CTGTGTGTG	1230.30	PASS	AB=0.818;AC=14;AF=0.269;AN=52;BaseQRankSum=2.105;DP=719;FS=7.280;HRun=0;HaplotypeScore=196.3001;InbreedingCoeff=0.3910;MQ=61.88;MQ0=16;MQRankSum=-3.167;QD=5.80;ReadPosRankSum=-4.138;VQSLOD=1.0379;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:31,1:45:2.42:14,2,0	0/0:9,0:10:6.02:0,6,131	./.	./.	0/0:12,5:17:0.47:0,0,1	0/1:10,0:22:23.83:24,0,66	0/1:27,0:35:22.24:22,0,59	0/0:28,0:28:1.28:0,1,37	0/1:14,0:19:13.85:125,0,14	0/0:21,0:23:4.64:0,5,91	0/0:9,0:8:6.02:0,6,149	0/0:19,0:22:32.98:0,33,747	0/0:19,0:21:17.97:0,18,295	0/0:19,0:19:11.98:0,12,295	0/0:20,0:20:21.05:0,21,433	0/0:12,0:13:9.01:0,9,173	0/0:40,0:41:36.58:0,37,1222	0/0:22,0:22:14.87:0,15,312	0/1:16,0:15:8.51:39,0,9	0/0:6,0:10:8.81:0,9,106	0/0:60,0:78:17.02:0,17,147	0/0:19,0:20:21:0,21,410	0/0:16,0:18:14.96:0,15,174	0/0:53,0:56:51.86:0,52,1452	1/1:25,1:26:6.34:132,6,0	1/1:27,0:26:33.48:699,33,0	1/1:11,3:15:8.97:241,9,0	1/1:6,0:6:3.01:89,3,0
chr10	9777804	.	T	TAAA	5242.30	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=13.840;DP=582;FS=2.446;HRun=8;HaplotypeScore=97.1256;InbreedingCoeff=0.9950;MQ=72.37;MQ0=0;MQRankSum=-7.646;QD=36.40;ReadPosRankSum=-0.889;VQSLOD=4.2116;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,32:42:87.25:1634,87,0	0/0:9,0:9:27.09:0,27,355	0/0:13,0:13:30.07:0,30,388	0/0:11,0:11:20.85:0,21,247	1/1:8,17:25:53.91:822,54,0	0/0:25,0:24:72.20:0,72,929	0/0:14,0:14:36.08:0,36,441	0/0:32,0:32:81.23:0,81,1037	0/0:25,0:25:63.19:0,63,826	0/0:26,0:26:69.18:0,69,869	0/0:16,0:17:42.06:0,42,527	0/0:20,0:20:48.12:0,48,616	0/0:23,0:23:66.21:0,66,867	0/0:19,0:19:54.17:0,54,707	0/0:20,0:20:54.17:0,54,709	0/0:19,0:19:54.13:0,54,680	0/0:27,0:27:78.25:0,78,1025	0/0:20,0:20:48.13:0,48,630	0/0:18,0:18:45.13:0,45,591	0/0:19,0:19:48.15:0,48,631	0/0:16,0:16:45.14:0,45,591	0/0:12,0:12:33.08:0,33,404	0/0:25,0:25:70.49:0,70,892	0/0:28,0:28:78.24:0,78,1009	1/1:4,14:19:36.08:663,36,0	1/1:7,18:26:23.80:1005,24,0	1/1:5,18:24:42.14:818,42,0	1/1:0,6:7:15.05:301,15,0
chr10	9777936	.	C	CAG	11268.73	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=18.719;DP=622;FS=10.950;HRun=0;HaplotypeScore=116.1258;InbreedingCoeff=0.9962;MQ=84.24;MQ0=0;MQRankSum=-5.393;QD=50.31;ReadPosRankSum=4.354;VQSLOD=4.5789;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,39:39:96.33:1852,96,0	0/0:6,0:6:18.06:0,18,291	0/0:17,0:17:45.15:0,45,710	0/0:25,0:25:69.04:0,69,994	1/1:0,25:26:66.23:1273,66,0	0/0:17,0:17:51.15:0,51,781	0/0:17,0:17:51.16:0,51,807	0/0:31,0:31:93.25:0,93,1375	0/0:27,0:27:81.28:0,81,1320	0/0:24,0:24:72.15:0,72,1106	0/0:15,0:15:45.14:0,45,700	0/0:28,0:28:84.26:0,84,1313	0/0:23,0:23:69.24:0,69,1118	0/0:25,0:25:75.25:0,75,1201	0/0:18,0:18:54.18:0,54,878	0/0:21,0:21:63.22:0,63,1024	0/0:20,0:20:60.20:0,60,977	0/0:18,0:18:51.17:0,51,818	1/1:0,16:19:57.18:1053,57,0	1/1:0,25:25:66.23:1277,66,0	1/1:0,31:33:80.83:1543,81,0	0/0:23,0:23:66.21:0,66,1051	0/0:17,0:17:48.16:0,48,775	0/0:26,0:26:75.20:0,75,1168	1/1:3,21:24:60.19:1102,60,0	1/1:0,23:23:69.24:1315,69,0	1/1:0,29:29:81.28:1564,81,0	1/1:0,6:6:15.05:289,15,0
chr10	9778362	.	G	GAA	3915.22	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-12.184;DP=707;FS=0.434;HRun=3;HaplotypeScore=110.0594;InbreedingCoeff=0.9941;MQ=87.65;MQ0=1;MQRankSum=-1.152;QD=43.50;ReadPosRankSum=-1.184;VQSLOD=2.8038;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,138,1886	0/0:12,0:12:36.05:0,36,416	0/0:23,0:24:59.41:0,59,797	0/0:33,0:33:87.12:0,87,1043	0/0:25,0:25:65.82:0,66,851	0/0:21,0:21:60.18:0,60,819	0/0:25,0:25:69.16:0,69,878	0/0:30,0:30:69.17:0,69,863	0/0:20,0:20:60.15:0,60,768	0/0:26,0:26:69.22:0,69,938	0/0:12,0:12:33.10:0,33,444	0/0:26,0:26:75.25:0,75,1042	0/0:25,0:25:66.19:0,66,878	0/0:26,0:26:78.20:0,78,1019	0/0:29,0:29:84.24:0,84,1120	0/0:24,0:24:66.21:0,66,904	0/0:28,0:28:78.23:0,78,1053	0/0:27,0:27:78.15:0,78,993	1/1:3,25:29:81.18:1287,81,0	1/1:2,24:26:69.04:1090,69,0	1/1:1,33:34:84.29:1538,84,0	0/0:19,0:19:54.11:0,54,682	0/0:16,0:16:48.15:0,48,652	0/0:35,0:34:90.21:0,90,1182	0/0:24,0:24:66.16:0,66,853	0/0:25,0:25:75.20:0,75,970	0/0:24,0:24:69.19:0,69,907	0/0:6,0:6:14.97:0,15,151
chr10	9781038	.	CT	C	9334.08	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=9.954;DP=507;FS=0.815;HRun=8;HaplotypeScore=51.0461;InbreedingCoeff=0.9921;MQ=76.09;MQ0=0;MQRankSum=-2.098;QD=24.96;ReadPosRankSum=3.271;VQSLOD=5.4373;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,19:19:54.09:521,54,0	1/1:0,16:16:42.07:406,42,0	0/0:17,0:17:39.08:0,39,450	0/0:11,0:10:27.05:0,27,304	1/1:2,29:31:75.10:723,75,0	0/0:20,0:20:57.14:0,57,672	0/0:13,0:13:30.09:0,30,362	1/1:6,25:31:75.07:710,75,0	0/0:14,0:14:39.10:0,39,458	1/1:4,17:21:50.89:484,51,0	1/1:0,22:22:66.11:637,66,0	1/1:1,15:16:42.07:406,42,0	1/1:2,13:15:33.05:319,33,0	1/1:0,8:8:21.03:203,21,0	1/1:1,14:15:39.06:377,39,0	1/1:1,11:12:33.05:319,33,0	1/1:0,30:30:87.14:840,87,0	1/1:3,17:20:45.07:435,45,0	0/0:27,0:27:72.21:0,72,851	0/0:25,0:25:66.20:0,66,797	0/0:6,0:6:18.06:0,18,217	1/1:0,23:23:66.11:637,66,0	1/1:4,9:13:27.04:261,27,0	1/1:0,4:4:12.02:116,12,0	1/1:2,21:23:60.10:579,60,0	1/1:2,12:14:36.06:348,36,0	1/1:2,27:29:75.12:724,75,0	1/1:0,12:12:30.05:290,30,0
chr10	9783285	.	GTAA	G	6388.94	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=13.811;DP=725;FS=13.122;HRun=0;HaplotypeScore=106.5502;InbreedingCoeff=0.9999;MQ=92.32;MQ0=0;MQRankSum=-7.255;QD=40.95;ReadPosRankSum=4.184;VQSLOD=5.4789;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,36:40:90.31:1535,90,0	0/0:13,0:13:39.13:0,39,899	0/0:31,0:31:83.63:0,84,1677	0/0:31,0:31:90.20:0,90,1904	1/1:0,21:21:36.59:614,37,0	0/0:19,0:19:54.19:0,54,1246	0/0:30,0:30:90.29:0,90,2009	0/0:38,0:38:99:0,108,2450	0/0:23,0:23:60.17:0,60,1315	0/0:33,0:33:99:0,99,2271	0/0:22,0:22:57.20:0,57,1303	0/0:22,0:22:63.22:0,63,1453	0/0:31,0:31:93.32:0,93,2143	0/0:22,0:22:63.22:0,63,1445	0/0:40,0:40:99:0,120,2761	0/0:25,0:24:75.25:0,75,1683	0/0:29,0:29:87.30:0,87,1971	0/0:19,0:19:57.13:0,57,1207	0/0:20,0:20:57.20:0,57,1303	0/0:28,0:28:81.27:0,81,1802	0/0:26,0:26:78.25:0,78,1754	0/0:17,0:17:51.18:0,51,1170	0/0:23,0:23:63.22:0,63,1445	0/0:27,0:27:81.28:0,81,1868	1/1:0,26:26:66.23:1125,66,0	1/1:3,27:30:84.26:1376,84,0	1/1:3,23:26:66.23:1125,66,0	1/1:0,13:13:36.12:614,36,0
chr10	9783717	.	T	TG	19831.73	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-10.954;DP=705;FS=3.601;HRun=1;HaplotypeScore=74.4029;InbreedingCoeff=0.9984;MQ=83.41;MQ0=0;MQRankSum=-5.083;QD=39.19;ReadPosRankSum=3.348;VQSLOD=5.6586;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,41:41:99:1664,111,0	1/1:0,8:8:21.07:307,21,0	0/0:22,0:22:60.01:0,60,700	0/0:20,0:20:50.29:0,50,583	1/1:3,37:40:99:1476,99,0	0/0:16,0:16:45.15:0,45,584	0/0:21,0:21:57.15:0,57,711	1/1:4,26:30:78.24:1129,78,0	0/0:28,0:28:84.26:0,84,1076	1/1:1,36:37:99:1593,108,0	1/1:1,12:13:36.12:539,36,0	1/1:1,28:29:78.26:1169,78,0	1/1:2,23:25:63.21:941,63,0	1/1:1,20:21:60.20:893,60,0	1/1:2,33:35:93.32:1394,93,0	1/1:2,17:19:19.98:752,20,0	1/1:0,21:21:57.19:854,57,0	1/1:0,13:13:36.12:540,36,0	0/0:24,0:24:72.22:0,72,920	0/0:41,0:41:99:0,123,1596	0/0:27,0:27:78.24:0,78,999	1/1:1,22:23:48.16:719,48,0	1/1:0,18:18:51.17:764,51,0	1/1:0,26:26:75.25:1124,75,0	1/1:0,28:28:75.25:1123,75,0	1/1:2,25:27:69.22:1010,69,0	1/1:2,32:35:87.29:1301,87,0	1/1:0,17:17:36.12:539,36,0
chr10	9783939	.	GATAGATAC	G	716.19	PASS	AB=1.000;AC=18;AF=0.375;AN=48;BaseQRankSum=1.938;DP=754;FS=5.628;HRun=0;HaplotypeScore=305.4124;InbreedingCoeff=0.2878;MQ=47.12;MQ0=7;MQRankSum=-2.822;QD=2.47;ReadPosRankSum=-2.184;VQSLOD=1.6513;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:24:11.65:0,12,168	1/1:11,0:11:8.89:62,9,0	./.	./.	0/0:34,0:33:8.92:0,9,83	./.	1/1:13,0:13:9.01:113,9,0	0/0:81,0:73:14.88:0,15,187	1/1:14,18:32:12.04:236,12,0	0/1:42,0:39:99:196,0,333	0/0:35,0:34:2.95:0,3,24	0/1:20,0:19:15.12:55,0,15	1/1:23,0:23:5.98:47,6,0	0/1:23,0:23:18.05:18,0,37	0/1:37,0:37:37.71:38,0,60	0/1:22,0:21:41.58:54,0,42	0/0:22,0:23:5.94:0,6,29	0/1:17,0:15:16.93:17,0,17	0/0:15,0:14:15.05:0,15,517	0/0:49,0:48:96.23:0,96,2453	0/0:20,0:20:42.11:0,42,1252	1/1:29,0:29:2.94:18,3,0	1/1:21,0:19:2.99:24,3,0	./.	0/0:31,0:31:11.98:0,12,119	0/0:44,0:44:37.77:0,38,577	0/0:36,0:35:24.43:0,24,226	0/0:18,0:18:12.43:0,12,95
chr10	9783943	.	GATAC	G	2578.30	PASS	AB=0.996;AC=30;AF=0.556;AN=54;BaseQRankSum=3.821;DP=752;FS=12.763;HRun=0;HaplotypeScore=263.2082;InbreedingCoeff=0.2555;MQ=46.20;MQ0=7;MQRankSum=-3.371;QD=4.33;ReadPosRankSum=-8.298;VQSLOD=-0.4967;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:23:11.66:0,12,137	1/1:12,0:12:20.88:162,21,0	0/1:10,0:8:5.01:5,0,151	0/0:6,0:5:12.01:0,12,171	0/1:33,0:32:60.02:60,0,213	0/0:18,0:18:18.06:0,18,295	0/0:12,0:12:18.09:0,18,209	1/1:86,0:78:78.94:663,79,0	0/1:32,0:32:5.41:5,0,511	0/1:41,0:38:85.91:339,0,86	1/1:33,0:32:22.66:178,23,0	1/1:23,0:22:25.73:233,26,0	1/1:24,0:24:13.08:141,13,0	0/1:22,1:23:20.89:89,0,21	1/1:28,8:36:16.63:243,17,0	1/1:22,0:21:18.54:132,19,0	0/1:25,0:25:15.64:39,0,16	1/1:18,0:16:4.35:97,4,0	0/0:14,0:13:33.02:0,33,587	0/0:49,0:48:99:0,141,2743	0/0:20,0:20:54.10:0,54,1078	1/1:31,0:31:26.90:213,27,0	1/1:22,0:20:6:66,6,0	./.	0/1:30,0:30:22.95:23,0,174	0/1:44,0:44:23.26:23,0,838	0/1:32,0:31:5.56:6,0,441	0/1:19,0:19:48.43:48,0,113
chr10	9783979	.	CATAG	C	1688.91	PASS	AB=0.558;AC=8;AF=0.143;AN=56;BaseQRankSum=7.935;DP=747;FS=4.590;HRun=0;HaplotypeScore=225.5884;InbreedingCoeff=0.5659;MQ=47.10;MQ0=23;MQRankSum=-7.670;QD=11.49;ReadPosRankSum=2.170;VQSLOD=2.8682;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:8,20:26:0:0,0,0	0/0:9,0:9:14.83:0,15,275	0/0:16,0:4:0.04:0,0,162	0/0:13,1:3:2.94:0,3,18	0/0:3,33:33:0.60:0,1,1	0/0:18,0:18:18.06:0,18,376	0/0:9,0:9:11.79:0,12,250	0/0:63,0:52:99:0,113,1732	0/0:29,0:29:3.43:0,3,639	0/0:48,0:45:97.33:0,97,2095	0/0:21,0:21:24.08:0,24,466	0/0:21,0:20:26.44:0,26,528	0/0:27,0:28:43.58:0,44,972	0/0:21,0:21:24.08:0,24,431	0/0:39,0:39:41.70:0,42,742	0/0:25,0:25:22.24:0,22,830	0/0:20,0:20:17.41:0,17,398	0/0:21,0:18:31.80:0,32,588	0/0:12,0:10:30.10:0,30,669	0/0:56,0:55:99:0,156,3400	0/0:24,0:24:66.21:0,66,1442	0/0:29,0:29:48.14:0,48,836	0/0:24,0:22:39.12:0,39,703	0/0:13,0:13:9.50:0,10,189	1/1:5,25:29:2.92:54,3,0	0/1:5,35:39:45.36:1295,0,45	1/1:5,28:31:18.06:308,18,0	1/1:2,14:16:9.03:161,9,0
chr10	9783983	.	GAT	G	123.48	PASS	AB=1.000;AC=6;AF=0.107;AN=56;BaseQRankSum=8.226;DP=735;FS=9.978;HRun=0;HaplotypeScore=205.3779;InbreedingCoeff=0.3495;MQ=48.47;MQ0=24;MQRankSum=-8.332;QD=0.83;ReadPosRankSum=3.222;VQSLOD=1.7179;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:25:5.58:0,6,46	0/0:9,0:9:14.85:0,15,289	0/0:17,0:4:12.04:0,12,203	0/0:18,0:4:5.61:0,6,66	0/1:34,0:31:0:0,0,0	0/0:19,0:19:21.07:0,21,395	0/0:9,0:9:15.01:0,15,252	0/0:47,0:41:99:0,123,2192	0/0:29,0:29:33.18:0,33,656	0/0:49,0:46:99:0,139,2240	0/0:20,1:20:24.08:0,24,463	0/0:21,0:20:25.87:0,26,519	0/0:29,1:30:59.79:0,60,1106	0/0:19,0:20:27.03:0,27,482	0/0:40,0:41:50.26:0,50,911	0/0:25,1:25:44.01:0,44,817	0/0:20,1:21:32.44:0,32,489	0/0:22,0:19:41.36:0,41,716	0/0:13,0:11:33.11:0,33,637	0/0:56,0:55:99:0,163,3044	0/0:24,0:24:69.22:0,69,1299	0/0:30,0:30:51.17:0,51,972	0/0:25,0:23:42.13:0,42,776	0/0:12,0:12:9.03:0,9,174	0/1:27,0:27:5.16:5,0,19	0/1:40,0:40:99:159,0,227	0/1:29,0:28:6.86:37,0,7	1/1:14,0:14:8.04:33,8,0
chr10	9784594	.	CA	C	8410.75	PASS	AB=0.962;AC=41;AF=0.732;AN=56;BaseQRankSum=-0.064;DP=539;FS=0.000;HRun=9;HaplotypeScore=83.8473;InbreedingCoeff=0.9207;MQ=73.57;MQ0=0;MQRankSum=1.588;QD=20.46;ReadPosRankSum=6.040;VQSLOD=4.8190;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,18:20:42.02:384,42,0	1/1:0,9:9:27:241,27,0	0/0:19,1:13:16.38:0,16,174	0/1:23,1:18:6.29:6,0,156	1/1:8,15:24:15.44:383,15,0	0/0:20,1:21:23.31:0,23,502	0/0:14,0:14:39.08:0,39,422	1/1:1,12:13:35.97:317,36,0	0/0:14,0:14:33.05:0,33,360	1/1:1,25:26:71.94:643,72,0	1/1:1,25:26:66.02:604,66,0	1/1:3,13:16:39.02:357,39,0	1/1:1,15:16:42.02:384,42,0	1/1:1,10:11:30.02:274,30,0	1/1:3,13:16:36.02:329,36,0	1/1:4,19:23:45.01:412,45,0	1/1:3,24:27:66.03:604,66,0	1/1:3,6:9:20.99:186,21,0	0/0:21,0:22:59.95:0,60,640	0/0:23,0:23:59.94:0,60,690	0/0:13,0:13:30.07:0,30,328	1/1:3,13:16:39.02:357,39,0	1/1:4,21:25:63.03:575,63,0	1/1:2,30:33:71.06:636,71,0	1/1:1,18:19:48.02:438,48,0	1/1:5,20:25:59.97:539,60,0	1/1:4,13:17:39.01:357,39,0	1/1:0,15:15:42.02:384,42,0
chr10	9784625	.	AAAAAC	A	2012.64	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=9.590;DP=558;FS=17.195;HRun=0;HaplotypeScore=172.1232;InbreedingCoeff=0.8774;MQ=56.35;MQ0=7;MQRankSum=-10.416;QD=10.76;ReadPosRankSum=1.296;VQSLOD=1.7637;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:17:18.83:81,19,0	0/0:10,0:10:21.07:0,21,580	0/0:36,0:12:6.78:0,7,258	0/0:50,0:14:17.93:0,18,285	1/1:22,0:22:15.60:105,16,0	1/1:10,9:18:39.09:690,39,0	1/1:7,6:13:36.06:559,36,0	0/0:18,0:18:51.15:0,51,1272	1/1:4,6:10:21.07:399,21,0	0/0:32,0:32:75.22:0,75,1825	0/0:38,0:38:99:0,101,2410	0/0:11,0:11:33.10:0,33,757	0/0:14,0:14:33.11:0,33,823	0/0:14,0:12:33.04:0,33,737	0/0:16,0:16:41.96:0,42,875	0/0:23,0:23:44.86:0,45,1004	0/0:26,0:26:63.17:0,63,1366	0/0:9,0:9:24.08:0,24,588	1/1:13,0:12:11.52:50,12,0	1/1:19,0:19:22.02:64,22,0	0/1:5,0:5:6.43:7,0,6	0/0:15,0:15:30.09:0,30,779	0/0:26,0:26:56.80:0,57,1179	0/0:31,0:31:70.84:0,71,1530	1/1:13,0:13:4.98:27,5,0	1/1:26,0:26:15.79:85,16,0	1/1:17,0:17:5.74:101,6,0	1/1:13,0:13:7.57:59,8,0
chr10	9784636	.	AAAAC	A	2751.55	PASS	AB=1.000;AC=25;AF=0.446;AN=56;BaseQRankSum=10.141;DP=575;FS=12.257;HRun=0;HaplotypeScore=170.8720;InbreedingCoeff=0.9118;MQ=50.06;MQ0=9;MQRankSum=-9.532;QD=12.07;ReadPosRankSum=0.915;VQSLOD=2.6913;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:14:26.90:172,27,0	0/0:11,0:11:33.10:0,33,708	0/1:49,0:15:12.81:13,0,352	0/0:71,0:12:20.11:0,20,333	1/1:23,1:24:48.01:334,48,0	1/1:15,1:15:18.07:374,18,0	1/1:15,0:15:22.87:306,23,0	0/0:21,0:21:62.76:0,63,1223	1/1:9,0:9:14.45:207,14,0	0/0:31,0:31:81.15:0,81,1668	0/0:38,0:38:99:0,109,2289	0/0:12,0:12:31.65:0,32,623	0/0:13,0:13:34.65:0,35,698	0/0:13,0:11:31.34:0,31,606	0/0:15,0:15:44.68:0,45,750	0/0:19,0:19:44.99:0,45,897	0/0:25,0:25:70.86:0,71,1203	0/0:11,0:11:26.54:0,27,548	1/1:14,0:13:10.12:129,10,0	1/1:17,0:17:43.54:293,44,0	1/1:4,0:4:9.35:60,9,0	0/0:11,0:11:30.10:0,30,725	0/0:24,0:24:60.12:0,60,1114	0/0:31,0:31:62.20:0,62,1329	1/1:16,0:16:30.57:185,31,0	1/1:20,1:21:52.37:354,52,0	1/1:14,2:16:35.86:333,36,0	1/1:12,0:12:27.26:217,27,0
chr10	9784637	.	AAAC	A	5251.08	PASS	AB=0.688;AC=23;AF=0.411;AN=56;BaseQRankSum=6.441;DP=571;FS=11.591;HRun=0;HaplotypeScore=153.1220;InbreedingCoeff=0.8649;MQ=50.01;MQ0=9;MQRankSum=-9.870;QD=30.18;ReadPosRankSum=1.552;VQSLOD=4.6538;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,8:14:35.56:427,36,0	0/0:11,0:11:33.11:0,33,644	0/0:49,0:15:24.47:0,24,410	0/0:70,1:12:4.11:0,4,301	1/1:14,11:25:57.40:738,57,0	1/1:16,0:15:11.66:297,12,0	1/1:15,0:15:6.35:244,6,0	0/0:22,0:22:66.14:0,66,1116	1/1:9,0:9:4.64:154,5,0	0/0:31,0:31:84.18:0,84,1497	0/0:40,0:40:99:0,114,2013	0/0:12,0:12:31.42:0,31,568	0/0:13,0:13:34.85:0,35,570	0/0:13,0:11:33.06:0,33,554	0/0:15,0:15:45.09:0,45,722	0/0:17,0:17:43.67:0,44,766	0/0:25,0:25:73.40:0,73,1131	0/0:11,0:11:27.38:0,27,470	0/1:6,5:11:14.55:300,0,15	1/1:3,13:16:45.02:672,45,0	1/1:2,2:4:11.84:134,12,0	0/0:11,0:11:30.10:0,30,615	0/0:23,0:23:60.08:0,60,969	0/0:31,0:31:74.11:0,74,1248	1/1:9,7:16:40.63:523,41,0	1/1:5,15:20:57.01:855,57,0	1/1:11,5:16:42.32:534,42,0	1/1:7,5:12:29.93:374,30,0
chr10	9784638	.	AAC	A	3565.48	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=9.657;DP=571;FS=11.516;HRun=0;HaplotypeScore=150.0704;InbreedingCoeff=0.7692;MQ=49.81;MQ0=9;MQRankSum=-10.242;QD=14.61;ReadPosRankSum=1.444;VQSLOD=3.1602;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:13:35.84:294,36,0	0/0:11,0:11:33.11:0,33,531	0/0:50,0:15:28.25:0,28,360	0/1:73,0:11:6.32:6,0,252	1/1:24,1:25:59.56:499,60,0	1/1:17,0:16:10.24:231,10,0	0/1:15,0:15:0.74:194,0,1	0/0:22,0:22:66.12:0,66,945	1/1:9,0:9:0.29:114,0,0	0/0:31,0:31:84.13:0,84,1230	0/0:40,0:40:99:0,113,1625	0/0:12,0:12:35.12:0,35,487	0/0:14,0:14:38.37:0,38,495	0/0:13,0:11:33.02:0,33,442	0/0:15,0:15:45.07:0,45,598	0/0:17,0:17:44.91:0,45,626	0/0:25,0:25:73.98:0,74,947	0/0:11,0:11:12.36:0,12,367	0/1:11,0:11:17.23:156,0,17	1/1:16,0:16:44.74:373,45,0	1/1:3,1:4:11.76:112,12,0	0/0:11,0:11:9.84:0,10,471	0/0:23,0:23:62.69:0,63,821	0/0:31,0:31:71.25:0,71,1033	1/1:14,1:15:41.43:355,41,0	1/1:18,1:19:56.88:508,57,0	1/1:13,3:16:44.55:443,45,0	1/1:11,0:11:30:280,30,0
chr10	9784639	.	AC	A	2639.91	PASS	AB=0.961;AC=21;AF=0.375;AN=56;BaseQRankSum=10.861;DP=574;FS=4.930;HRun=1;HaplotypeScore=146.1101;InbreedingCoeff=0.7430;MQ=49.39;MQ0=11;MQRankSum=-10.345;QD=15.26;ReadPosRankSum=0.765;VQSLOD=3.6509;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:13:35.75:261,36,0	0/0:11,0:11:33.11:0,33,425	0/0:50,1:15:30.57:0,31,325	0/0:73,3:11:3.26:0,3,193	1/1:24,1:25:61.16:420,61,0	1/1:17,0:16:22.98:176,23,0	0/1:13,2:15:54.71:154,0,55	0/0:22,0:22:65.87:0,66,779	0/1:9,0:9:27.18:73,0,27	0/0:31,0:31:77.13:0,77,966	0/0:40,0:40:98.57:0,99,1259	0/0:12,0:12:21.31:0,21,350	0/0:14,0:14:33.98:0,34,387	0/0:13,0:11:29.19:0,29,326	0/0:15,0:15:44.04:0,44,459	0/0:17,0:17:44.76:0,45,484	0/0:25,0:25:56.02:0,56,701	0/0:10,0:10:17.99:0,18,290	0/1:11,0:11:11.73:139,0,12	1/1:16,0:16:42.11:292,42,0	1/1:6,0:6:16.91:112,17,0	0/0:11,0:11:9.81:0,10,358	0/0:21,0:21:49.87:0,50,655	0/0:31,0:31:68.16:0,68,792	1/1:13,1:14:41.35:285,41,0	1/1:19,1:20:56.17:388,56,0	1/1:16,0:16:45.08:328,45,0	1/1:10,1:11:29.83:223,30,0
chr10	9784664	.	CA	C	2901.14	PASS	AB=0.798;AC=36;AF=0.643;AN=56;BaseQRankSum=-5.196;DP=567;FS=2.882;HRun=14;HaplotypeScore=141.4557;InbreedingCoeff=0.1745;MQ=47.97;MQ0=20;MQRankSum=2.108;QD=7.82;ReadPosRankSum=3.973;VQSLOD=2.0068;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:13:4.43:0,4,36	1/1:4,6:10:1.89:153,2,0	0/0:63,0:15:0.13:0,0,58	0/0:80,0:8:5.70:0,6,30	0/0:25,0:25:15.35:0,15,79	0/1:4,8:14:4.07:85,0,4	1/1:6,4:10:15.44:74,15,0	1/1:13,19:34:1.83:277,2,0	1/1:1,6:8:21.90:114,22,0	1/1:13,14:27:31.52:358,32,0	1/1:13,20:35:75.20:503,75,0	0/1:6,2:9:9.47:65,0,9	0/1:12,1:13:49.06:49,0,57	0/1:4,4:6:9.10:45,0,9	1/1:7,4:12:25.80:169,26,0	1/1:5,6:13:21.87:135,22,0	1/1:11,8:22:16.10:226,16,0	0/1:6,5:11:11.63:87,0,12	1/1:8,4:11:5.60:68,6,0	0/1:7,6:13:2.37:35,0,2	1/1:8,1:7:6.14:25,6,0	1/1:7,7:14:1.90:156,2,0	1/1:7,11:18:12.84:224,13,0	0/1:19,8:27:57.39:208,0,57	0/1:16,0:16:0.86:1,0,24	0/1:20,1:21:4.84:5,0,63	0/0:13,0:13:15.77:0,16,77	0/1:10,0:10:3.38:3,0,15
chr10	9784675	.	AAAAC	A	1751.79	PASS	AB=0.973;AC=16;AF=0.286;AN=56;BaseQRankSum=7.447;DP=519;FS=17.931;HRun=0;HaplotypeScore=167.3650;InbreedingCoeff=0.2665;MQ=49.24;MQ0=17;MQRankSum=-8.460;QD=10.30;ReadPosRankSum=-2.430;VQSLOD=1.7153;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:13,0:11:79.27:79,0,80	0/0:10,0:10:27.33:0,27,286	0/0:45,0:9:2.57:0,3,44	0/0:57,0:7:10.19:0,10,56	1/1:22,2:24:25.60:315,26,0	1/1:17,0:16:2.35:309,2,0	0/1:8,0:10:3.89:98,0,4	0/0:32,1:33:75.74:0,76,848	1/1:12,0:11:9.92:164,10,0	0/0:26,0:26:65.50:0,66,653	0/0:31,0:31:86.92:0,87,901	0/0:9,0:9:22.08:0,22,267	0/0:9,0:9:7.24:0,7,273	0/0:7,0:5:11.98:0,12,173	0/0:14,0:14:37.65:0,38,350	0/0:11,0:11:22.48:0,22,193	0/0:23,0:23:60.15:0,60,706	0/0:13,0:12:3.57:0,4,280	1/1:12,0:9:8.83:120,9,0	0/1:12,0:14:60.61:173,0,61	0/1:9,0:7:6.83:52,0,7	0/0:14,0:14:35.91:0,36,398	0/0:17,0:17:43.55:0,44,518	0/0:30,0:29:52.46:0,52,719	0/1:15,1:16:26.53:135,0,27	0/1:20,0:20:12.03:186,0,12	0/1:11,0:11:5.24:141,0,5	0/1:9,2:11:11.84:150,0,12
chr10	9784676	.	AAAC	A	1427.30	PASS	AB=0.984;AC=24;AF=0.429;AN=56;BaseQRankSum=7.450;DP=515;FS=17.090;HRun=0;HaplotypeScore=159.0131;InbreedingCoeff=0.3855;MQ=49.33;MQ0=18;MQRankSum=-9.175;QD=5.87;ReadPosRankSum=-3.608;VQSLOD=0.8568;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:12,1:11:41.14:70,0,41	0/0:10,0:10:23.88:0,24,190	0/1:45,0:9:1.51:2,0,39	0/0:55,0:7:12.24:0,12,57	1/1:21,2:22:34.11:341,34,0	1/1:17,0:16:12.41:166,12,0	1/1:10,0:10:8.78:51,9,0	0/0:33,0:33:69.59:0,70,644	1/1:12,0:11:12.76:100,13,0	0/0:25,0:25:54.11:0,54,477	0/0:31,0:31:73.09:0,73,602	0/1:9,0:9:6.29:6,0,158	0/1:9,0:9:18.23:18,0,192	0/0:6,0:4:11.94:0,12,122	0/0:15,0:15:26.41:0,26,253	0/0:12,0:12:15.49:0,15,141	0/0:23,0:23:55.97:0,56,482	0/1:13,0:12:9.14:9,0,189	1/1:12,0:9:3.98:70,4,0	0/1:14,0:14:31.03:70,0,31	0/1:8,0:6:0.81:27,0,1	0/0:14,0:14:35.66:0,36,291	0/0:17,0:17:38.37:0,38,353	0/0:30,0:29:42.41:0,42,540	0/1:15,1:16:24.20:160,0,24	1/1:17,3:20:4.88:219,5,0	1/1:11,0:11:10.11:167,10,0	1/1:11,0:11:0.48:137,0,0
chr10	9784677	.	AAC	A	1247.20	PASS	AB=0.992;AC=23;AF=0.411;AN=56;BaseQRankSum=8.036;DP=504;FS=19.895;HRun=0;HaplotypeScore=148.3208;InbreedingCoeff=0.3688;MQ=49.63;MQ0=17;MQRankSum=-8.852;QD=6.50;ReadPosRankSum=-2.999;VQSLOD=1.6081;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:13,0:11:31.90:56,0,32	0/0:10,0:10:0.29:0,0,75	0/0:44,1:9:3.66:0,4,45	0/0:51,1:8:5.09:0,5,29	1/1:20,3:22:35.62:307,36,0	1/1:17,0:16:14.77:117,15,0	1/1:8,0:8:12.96:47,13,0	0/0:34,0:34:58.81:0,59,456	1/1:12,0:11:17.56:84,18,0	0/0:25,0:25:30.90:0,31,275	0/0:31,0:31:22.43:0,22,285	0/1:9,0:9:19.96:20,0,84	0/1:8,0:8:16.29:16,0,130	0/0:6,0:4:10.47:0,10,74	0/0:14,0:14:2.46:0,2,144	0/0:12,0:12:9.28:0,9,88	0/0:23,0:23:21.63:0,22,274	0/1:13,0:12:3.48:3,0,112	0/1:12,0:9:1.58:52,0,2	0/1:11,0:11:8.93:50,0,9	1/1:8,0:6:0.70:22,1,0	0/0:13,0:13:31.47:0,31,179	0/0:16,0:16:34.32:0,34,198	0/0:30,0:29:30.12:0,30,343	0/1:15,1:16:20.45:159,0,20	1/1:20,0:20:17.64:222,18,0	1/1:10,1:11:18.82:158,19,0	1/1:11,0:11:2.78:116,3,0
chr10	9784679	.	CAAA	C	821	PASS	AB=0.975;AC=18;AF=0.321;AN=56;BaseQRankSum=9.657;DP=485;FS=0.000;HRun=14;HaplotypeScore=151.8424;InbreedingCoeff=0.2578;MQ=50.65;MQ0=15;MQRankSum=-8.763;QD=4.23;ReadPosRankSum=0.230;VQSLOD=0.1433;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:12,0:10:10:10,0,62	0/0:10,0:10:30.08:0,30,462	0/1:38,0:8:9.37:9,0,66	0/0:48,0:8:14.20:0,14,118	0/1:19,0:18:8.03:69,0,8	1/1:15,2:16:20.41:305,20,0	1/1:8,0:8:10.84:113,11,0	0/0:34,0:34:84.21:0,84,1342	1/1:10,2:11:11.66:136,12,0	0/0:24,0:24:65.57:0,66,1012	0/0:31,0:31:90.09:0,90,1395	0/0:9,0:9:23.87:0,24,362	0/1:8,0:8:0.80:1,0,322	0/0:7,0:5:15.02:0,15,241	0/0:15,0:15:44.78:0,45,648	0/0:13,0:13:32.73:0,33,442	0/0:26,0:26:77.95:0,78,1177	0/0:12,0:13:22.97:0,23,484	0/1:9,1:8:24:68,0,24	0/1:11,0:11:7.43:150,0,7	1/1:8,0:6:7.50:50,8,0	0/0:14,0:14:39.13:0,39,669	0/0:16,0:16:45.11:0,45,726	0/0:30,0:29:41.92:0,42,949	0/1:13,0:15:28.30:28,0,62	0/1:16,0:15:2.35:2,0,56	0/1:8,0:8:12.95:13,0,15	0/1:9,0:9:7.56:38,0,8
chr10	9784682	.	A	AC	1163.41	PASS	AB=0.938;AC=20;AF=0.357;AN=56;BaseQRankSum=11.654;DP=467;FS=0.000;HRun=0;HaplotypeScore=134.3492;InbreedingCoeff=0.5371;MQ=51.29;MQ0=15;MQRankSum=-10.410;QD=7.09;ReadPosRankSum=-0.523;VQSLOD=3.4218;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:9,1:8:5.18:67,0,5	0/0:10,0:10:30.08:0,30,381	0/1:38,0:8:8.63:9,0,52	0/0:49,0:9:7.01:0,7,63	1/1:15,0:16:16.79:91,17,0	1/1:7,8:18:27.25:336,27,0	1/1:3,3:8:23.04:181,23,0	0/0:35,0:35:84.23:0,84,1127	1/1:4,4:10:23.04:164,23,0	0/0:22,0:22:65.71:0,66,882	0/0:33,0:33:90.11:0,90,1179	0/0:10,0:10:30.01:0,30,350	0/0:8,0:8:19.30:0,19,241	0/0:7,0:5:15.02:0,15,187	0/0:14,0:14:42.11:0,42,550	0/0:13,0:13:32.74:0,33,393	0/0:27,0:27:80.99:0,81,1032	0/0:15,0:15:37.26:0,37,459	0/1:9,2:9:43.48:98,0,43	1/1:4,6:13:36.14:269,36,0	1/1:6,1:6:2.13:55,2,0	0/0:14,0:14:39.13:0,39,532	0/0:17,0:17:48.58:0,49,615	0/0:28,1:28:24.93:0,25,772	0/1:13,0:14:31.17:31,0,51	0/1:6,0:5:5.58:6,0,36	1/1:4,0:4:7.11:44,7,0	0/1:6,0:6:2.34:2,0,16
chr10	9784686	.	CAAAAAACAAAAAA	C	1697.08	PASS	AB=0.945;AC=16;AF=0.286;AN=56;BaseQRankSum=10.901;DP=455;FS=0.000;HRun=0;HaplotypeScore=225.2450;InbreedingCoeff=0.4472;MQ=49.49;MQ0=16;MQRankSum=-8.868;QD=13.16;ReadPosRankSum=1.356;VQSLOD=2.2786;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:12,0:9:69.74:70,0,102	0/0:12,0:12:36.11:0,36,1264	0/0:28,0:5:2.15:0,2,127	0/0:38,0:9:11.56:0,12,250	0/1:22,0:23:97.53:174,0,98	1/1:13,2:15:23.13:376,23,0	1/1:10,0:10:13.89:98,14,0	0/0:33,0:33:78.26:0,78,3311	1/1:9,2:10:19.14:327,19,0	0/0:21,0:21:57.19:0,57,2546	0/0:29,0:29:81.23:0,81,3613	0/0:11,0:11:27.09:0,27,1109	0/0:7,0:7:21.07:0,21,943	0/0:6,0:6:18.05:0,18,709	0/0:14,0:14:42.10:0,42,1821	0/0:14,0:14:30.07:0,30,1092	0/0:28,0:28:84.19:0,84,3441	0/0:14,0:15:41.49:0,41,1388	0/1:9,1:8:95.38:210,0,95	1/1:15,0:14:24.62:232,25,0	1/1:6,0:6:11.16:125,11,0	0/0:14,0:14:36.12:0,36,1652	0/0:16,0:16:45.15:0,45,1845	0/0:28,0:28:36.06:0,36,2428	0/1:12,0:13:28.77:162,0,29	0/0:9,0:8:11.07:0,11,226	0/1:6,0:6:2.95:3,0,42	0/1:6,0:7:64.34:102,0,64
chr10	9784693	.	CAA	C	584.39	PASS	AB=0.943;AC=13;AF=0.232;AN=56;BaseQRankSum=9.181;DP=441;FS=9.715;HRun=9;HaplotypeScore=130.0061;InbreedingCoeff=0.6790;MQ=52.81;MQ0=14;MQRankSum=-8.588;QD=8.72;ReadPosRankSum=0.712;VQSLOD=0.4129;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:11:21.83:0,22,180	0/0:11,0:11:27.07:0,27,388	0/0:27,0:7:11.32:0,11,97	0/0:40,0:11:19.73:0,20,212	0/0:17,0:17:4.09:0,4,145	1/1:8,2:10:26.37:202,26,0	1/1:3,2:5:14.03:102,14,0	0/0:31,0:31:75.25:0,75,1186	1/1:5,2:7:19.55:175,20,0	0/0:22,0:22:42.98:0,43,797	0/0:30,0:30:72.17:0,72,1038	0/0:10,0:10:30.09:0,30,436	0/0:7,0:7:16.29:0,16,220	0/0:8,0:8:21.07:0,21,340	0/0:14,0:14:39.10:0,39,611	0/1:12,1:13:0.01:0,0,425	0/0:30,0:30:80.22:0,80,1223	0/0:18,0:18:41.68:0,42,577	0/1:8,1:8:52.92:88,0,53	1/1:9,1:9:19.95:132,20,0	1/1:6,1:6:8.12:52,8,0	0/0:12,0:12:30.10:0,30,478	0/0:14,0:15:36.07:0,36,525	0/0:29,0:28:36.84:0,37,857	0/0:16,0:16:4.89:0,5,148	0/0:11,0:10:15.29:0,15,133	0/0:10,0:10:12.04:0,12,60	0/1:6,0:6:4.45:4,0,34
chr10	9784695	.	A	AC	862.44	PASS	AB=0.857;AC=11;AF=0.196;AN=56;BaseQRankSum=8.522;DP=440;FS=11.618;HRun=0;HaplotypeScore=125.1606;InbreedingCoeff=0.8328;MQ=53.33;MQ0=13;MQRankSum=-7.929;QD=15.68;ReadPosRankSum=0.756;VQSLOD=5.2590;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:12:25.86:0,26,153	0/0:10,0:10:30.07:0,30,369	0/0:26,0:7:13.68:0,14,117	0/0:40,0:11:12.74:0,13,114	0/0:16,0:16:29.02:0,29,192	1/1:5,6:11:26.61:252,27,0	1/1:3,3:6:17.53:140,18,0	0/0:31,0:31:84.18:0,84,1087	1/1:7,2:9:22.49:184,22,0	0/0:21,0:21:59.55:0,60,762	0/0:30,0:30:87.17:0,87,1060	0/0:11,0:11:33.09:0,33,428	0/0:7,0:7:21.02:0,21,241	0/0:9,0:9:24.07:0,24,311	0/0:14,0:14:39.09:0,39,521	0/0:12,0:12:24.56:0,25,418	0/0:30,0:30:86.88:0,87,1112	0/0:20,0:20:46.25:0,46,539	0/1:10,2:11:57.55:129,0,58	1/1:4,7:10:26.76:271,27,0	1/1:5,1:6:5.35:58,5,0	0/0:14,0:14:36.10:0,36,461	0/0:13,0:13:39.07:0,39,489	0/0:27,0:26:64.89:0,65,831	0/0:15,0:15:38.92:0,39,224	0/0:10,0:9:26.13:0,26,198	0/0:10,0:10:25.16:0,25,156	0/0:5,0:5:9.36:0,9,62
chr10	9784702	.	A	AAC	1815.60	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=9.855;DP=455;FS=48.252;HRun=0;HaplotypeScore=133.2978;InbreedingCoeff=0.7083;MQ=56.66;MQ0=9;MQRankSum=-5.764;QD=15.13;ReadPosRankSum=1.089;VQSLOD=1.7427;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:12,1:13:32.57:332,33,0	0/0:9,0:9:23.99:0,24,303	0/1:28,0:11:2.17:2,0,122	0/0:38,0:16:24.53:0,25,226	1/1:14,0:17:47.80:478,48,0	0/1:13,0:13:2.18:2,0,93	0/0:8,0:8:10.04:0,10,84	0/0:33,0:33:87.20:0,87,1136	0/0:9,0:9:14.82:0,15,114	0/0:20,0:20:29.26:0,29,685	0/0:24,0:24:66.06:0,66,861	0/0:11,0:11:33.10:0,33,442	0/0:6,0:6:18:0,18,212	0/0:9,0:9:21.96:0,22,318	0/0:16,0:16:42.11:0,42,564	0/0:15,0:15:45.04:0,45,525	0/0:36,0:36:91.86:0,92,1189	0/0:18,0:18:45.05:0,45,561	0/0:12,0:12:21.63:0,22,126	0/0:12,0:11:4.23:0,4,69	0/0:6,0:6:7.51:0,8,47	0/0:15,0:15:42.09:0,42,520	0/0:12,0:12:33.08:0,33,442	0/0:26,0:25:57.05:0,57,810	1/1:16,2:19:55.76:526,56,0	0/1:12,0:11:16.29:158,0,16	1/1:9,2:11:33.02:394,33,0	1/1:5,0:5:11.31:97,11,0
chr10	9785273	.	GATTA	G	6724.25	PASS	AB=0.553;AC=11;AF=0.196;AN=56;BaseQRankSum=11.874;DP=704;FS=5.798;HRun=0;HaplotypeScore=119.9296;InbreedingCoeff=0.8867;MQ=80.65;MQ0=0;MQRankSum=-4.756;QD=43.38;ReadPosRankSum=2.961;VQSLOD=5.4364;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,30:32:66.23:1252,66,0	0/0:12,0:12:36.12:0,36,933	0/0:21,0:21:54.18:0,54,1290	0/0:18,0:18:45.15:0,45,1108	1/1:0,20:20:51.17:949,51,0	0/0:20,0:20:57.20:0,57,1499	0/0:24,0:24:68.99:0,69,1832	0/0:36,0:36:99:0,108,2744	0/0:24,0:24:69.22:0,69,1776	0/0:36,0:36:99:0,105,2791	0/0:21,0:21:60.21:0,60,1608	0/0:25,0:25:72.25:0,72,1913	0/0:26,0:26:75.26:0,75,2025	0/0:29,0:29:87.30:0,87,2340	0/0:25,0:25:75.26:0,75,2025	0/0:24,0:24:69.24:0,69,1801	0/0:35,0:35:99:0,102,2688	0/0:26,0:26:75.26:0,75,2023	0/0:27,0:27:78.25:0,78,2043	0/0:23,0:23:69.24:0,69,1854	0/0:27,0:27:78.25:0,78,1979	0/0:25,0:25:69.24:0,69,1806	0/0:21,0:21:63.22:0,63,1659	0/0:24,0:24:72.25:0,72,1903	1/1:1,15:16:30.10:569,30,0	1/1:2,33:35:99:1787,99,0	1/1:5,26:31:72.25:1366,72,0	0/1:4,17:21:99:800,0,189
chr10	9786153	.	G	GA	826.96	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=3.110;DP=447;FS=9.502;HRun=8;HaplotypeScore=49.1303;InbreedingCoeff=0.9589;MQ=72.82;MQ0=0;MQRankSum=-0.060;QD=25.06;ReadPosRankSum=0.311;VQSLOD=3.9209;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:63.02:0,63,572	0/0:9,0:9:24:0,24,215	0/0:6,0:7:10.63:0,11,70	0/0:9,0:8:11.26:0,11,79	0/0:16,0:16:45.02:0,45,412	1/1:2,8:10:27.08:312,27,0	1/1:5,9:14:30.09:346,30,0	0/0:27,0:27:71.96:0,72,651	1/1:0,9:9:27.08:312,27,0	0/0:21,0:21:57.02:0,57,522	0/0:17,0:17:48.02:0,48,439	0/0:16,0:16:33:0,33,302	0/0:14,0:14:35.99:0,36,324	0/0:14,0:14:33.01:0,33,302	0/0:18,0:18:51.02:0,51,467	0/0:13,0:13:39.02:0,39,357	0/0:21,0:21:63.03:0,63,577	0/0:16,0:16:41.99:0,42,378	0/0:27,0:27:60.01:0,60,545	0/0:16,0:16:42.01:0,42,384	0/0:6,0:6:12:0,12,110	0/0:17,0:16:45.02:0,45,412	0/0:17,0:17:42.02:0,42,384	0/0:17,0:17:51.03:0,51,467	0/0:25,0:25:72.04:0,72,658	0/0:25,0:25:60.03:0,60,549	0/0:16,0:16:45.02:0,45,412	0/0:8,0:8:21.01:0,21,192
chr10	9786215	.	G	GA	1089.66	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-7.280;DP=459;FS=4.315;HRun=7;HaplotypeScore=45.7255;InbreedingCoeff=0.9810;MQ=87.12;MQ0=0;MQRankSum=-2.450;QD=25.34;ReadPosRankSum=2.949;VQSLOD=4.1183;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:54:0,54,510	0/0:9,0:9:24.03:0,24,232	0/0:17,0:17:45.06:0,45,429	0/0:17,0:17:36.05:0,36,346	0/0:21,0:21:63.10:0,63,608	1/1:1,14:15:33.10:399,33,0	1/1:2,14:16:42.13:507,42,0	0/0:33,0:33:78.06:0,78,739	1/1:3,9:12:27.08:326,27,0	0/0:22,0:22:57.07:0,57,545	0/0:9,0:9:27.04:0,27,261	0/0:22,0:22:60.09:0,60,579	0/0:14,0:14:39.05:0,39,371	0/0:17,0:17:39.04:0,39,376	0/0:14,0:14:36.05:0,36,348	0/0:8,0:8:24.04:0,24,232	0/0:29,0:29:81.12:0,81,782	0/0:21,0:21:57.09:0,57,550	0/0:17,0:17:45.07:0,45,434	0/0:21,0:21:57.09:0,57,550	0/0:20,0:20:56.12:0,56,528	0/0:8,0:8:24.04:0,24,232	0/0:7,0:7:18.03:0,18,174	0/0:23,0:23:66.11:0,66,637	0/0:10,0:10:24.03:0,24,232	0/0:20,0:20:51.08:0,51,492	0/0:11,0:11:21.02:0,21,203	0/0:5,0:5:12.02:0,12,116
chr10	9786438	.	AAC	A	1918.17	PASS	AB=0.823;AC=25;AF=0.481;AN=52;BaseQRankSum=-2.375;DP=716;FS=19.246;HRun=0;HaplotypeScore=128.2762;InbreedingCoeff=0.6032;MQ=55.87;MQ0=25;MQRankSum=2.940;QD=6.15;ReadPosRankSum=1.302;VQSLOD=1.7066;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:48:16.99:0,17,154	1/1:3,2:8:11.69:94,12,0	./.	./.	0/0:12,0:23:3.01:0,3,18	0/0:15,0:13:5.83:0,6,34	0/0:29,0:27:19.92:0,20,141	0/1:29,1:28:4.80:101,0,5	0/0:29,0:26:11.89:0,12,112	1/1:13,4:17:9:89,9,0	1/1:11,6:17:2.78:33,3,0	0/1:20,5:30:28.89:218,0,29	1/1:21,0:20:5.42:26,5,0	1/1:5,5:11:14.87:142,15,0	1/1:11,7:20:20.76:183,21,0	1/1:11,7:19:20.72:193,21,0	0/1:12,6:18:30.15:117,0,30	1/1:9,10:18:6.33:193,6,0	0/0:16,0:18:23.93:0,24,214	0/0:19,0:19:3.46:0,3,25	0/0:46,0:64:20.99:0,21,193	1/1:20,1:24:14.78:126,15,0	1/1:20,1:23:8.97:71,9,0	1/1:25,26:52:50.73:522,51,0	0/0:12,0:14:5.94:0,6,44	0/0:25,0:24:32.89:0,33,327	0/0:10,0:10:8.91:0,9,63	0/0:8,0:9:18.04:0,18,223
chr10	9786469	.	A	ACACACA	2012.98	PASS	AB=1.000;AC=27;AF=0.482;AN=56;BaseQRankSum=-5.973;DP=769;FS=12.814;HRun=0;HaplotypeScore=171.6014;InbreedingCoeff=0.6896;MQ=54.79;MQ0=44;MQRankSum=0.315;QD=4.49;ReadPosRankSum=-5.359;VQSLOD=-0.0716;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:48,0:45:20.62:460,21,0	0/0:10,0:10:12.51:0,13,168	1/1:44,0:9:0.89:2,1,0	0/1:62,0:15:0.01:0,0,0	1/1:22,0:22:3.01:88,3,0	1/1:16,0:14:6.02:131,6,0	1/1:35,0:33:18.48:267,18,0	0/0:25,0:23:6.84:0,7,101	1/1:31,0:28:12.03:271,12,0	0/0:24,0:24:1.52:0,2,41	0/0:14,0:14:2.78:0,3,42	0/0:27,0:27:36.59:0,37,541	0/0:17,0:16:4.38:0,4,28	0/0:17,0:17:15.04:0,15,177	0/0:26,0:26:17.65:0,18,220	0/0:28,0:28:21.07:0,21,293	0/0:22,0:22:14.84:0,15,228	0/0:21,0:19:13.18:0,13,249	1/1:19,0:19:14.05:259,14,0	1/1:13,5:19:3.27:25,3,0	1/1:84,0:79:9.50:198,10,0	0/0:23,0:22:7.11:0,7,51	0/0:21,0:21:0.54:0,1,1	0/0:46,0:45:51.52:0,52,687	1/1:18,0:16:5.95:96,6,0	1/1:29,0:28:8.90:98,9,0	1/1:10,0:10:6.02:131,6,0	1/1:11,0:10:6.02:172,6,0
chr10	9788259	.	G	GT	2854.36	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-9.051;DP=560;FS=3.064;HRun=10;HaplotypeScore=58.3382;InbreedingCoeff=0.9715;MQ=69.56;MQ0=0;MQRankSum=0.762;QD=23.40;ReadPosRankSum=-0.435;VQSLOD=4.3008;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:39:99:0,100,790	0/0:6,0:6:14.98:0,15,123	0/0:24,1:21:6.33:0,6,168	0/0:14,0:8:15.40:0,15,115	0/0:19,0:19:44.93:0,45,369	1/1:1,16:17:45.11:473,45,0	1/1:1,24:25:63.16:672,63,0	0/0:27,0:27:36.69:0,37,420	1/1:2,15:17:41.94:447,42,0	0/0:19,0:19:44.89:0,45,362	0/0:20,0:21:49.96:0,50,397	0/0:11,0:11:32.96:0,33,271	0/0:18,0:18:37.40:0,37,290	0/0:15,0:15:41.92:0,42,340	0/0:17,0:17:44.94:0,45,369	0/0:20,0:20:21.15:0,21,343	0/0:28,1:30:50.96:0,51,614	0/0:29,0:29:74.87:0,75,614	1/1:4,23:28:66:685,66,0	1/1:5,21:26:51.12:540,51,0	1/1:1,8:9:21.05:224,21,0	0/0:17,0:17:44.94:0,45,369	0/0:17,0:17:38.78:0,39,309	0/0:17,0:17:47.93:0,48,393	0/0:30,0:30:80.67:0,81,641	0/0:22,0:22:50.90:0,51,417	0/0:13,0:14:34.98:0,35,277	0/0:10,0:10:20.95:0,21,172
chr10	9788988	.	GGGGGT	G	1884.20	PASS	AC=18;AF=0.360;AN=50;BaseQRankSum=3.431;DP=177;FS=1.832;HRun=0;HaplotypeScore=36.0100;InbreedingCoeff=0.6812;MQ=79.98;MQ0=1;MQRankSum=-3.241;QD=24.16;ReadPosRankSum=3.497;VQSLOD=2.7123;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,11:15:21.07:397,21,0	./.	0/0:11,0:5:3.01:0,3,63	0/0:19,0:14:14.42:0,14,311	1/1:4,6:10:12.04:227,12,0	0/0:5,0:5:9.03:0,9,237	0/0:5,0:5:6.02:0,6,153	0/0:5,0:5:3.01:0,3,44	0/0:3,0:3:6.02:0,6,172	0/0:6,0:6:6.02:0,6,172	0/0:3,0:3:8.99:0,9,171	0/0:6,0:6:6.02:0,6,172	0/0:4,0:4:9.03:0,9,255	0/0:5,0:5:6.02:0,6,170	0/0:3,0:3:9.03:0,9,228	0/0:2,0:2:6.02:0,6,172	./.	0/0:11,0:11:17.98:0,18,358	1/1:4,5:9:15.05:284,15,0	1/1:2,6:8:15.05:282,15,0	1/1:9,8:17:21.03:360,21,0	0/0:3,0:3:6.02:0,6,172	0/0:2,0:2:3.01:0,3,55	./.	1/1:4,1:5:3.01:57,3,0	1/1:1,2:3:6.02:113,6,0	1/1:2,4:6:12.04:227,12,0	1/1:1,4:5:6.02:113,6,0
chr10	9789122	.	AC	A	3893.21	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=10.149;DP=497;FS=4.323;HRun=2;HaplotypeScore=49.1431;InbreedingCoeff=0.9914;MQ=84.10;MQ0=0;MQRankSum=-2.222;QD=36.73;ReadPosRankSum=2.887;VQSLOD=4.1424;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,32:33:96.31:1246,96,0	0/0:4,0:4:12.04:0,12,176	0/0:20,0:21:58.39:0,58,814	0/0:11,0:11:30.09:0,30,418	1/1:0,16:16:42.14:545,42,0	0/0:12,0:12:36.12:0,36,537	0/0:15,0:15:45.15:0,45,661	0/0:24,0:24:66.22:0,66,970	0/0:14,0:14:42.14:0,42,629	0/0:18,0:18:51.17:0,51,764	0/0:8,0:8:24.08:0,24,356	0/0:24,0:24:69.23:0,69,1034	0/0:21,0:21:63.20:0,63,923	0/0:15,0:15:45.15:0,45,672	0/0:15,0:15:42.14:0,42,628	0/0:7,0:7:21.07:0,21,315	0/0:30,0:30:90.30:0,90,1348	0/0:27,0:27:72.20:0,72,1035	0/0:16,0:16:48.13:0,48,660	0/0:15,0:15:45.15:0,45,672	0/0:50,0:50:99:0,141,2112	0/0:13,0:13:39.09:0,39,559	0/0:9,0:9:24.08:0,24,359	0/0:22,0:22:66.22:0,66,988	1/1:0,10:10:24.08:311,24,0	1/1:0,17:17:48.16:623,48,0	1/1:0,21:21:63.20:818,63,0	1/1:0,9:9:27.09:350,27,0
chr10	9790540	.	CTGTG	C	1345.07	PASS	AB=0.905;AC=26;AF=0.542;AN=48;BaseQRankSum=-1.025;DP=504;FS=0.000;HRun=0;HaplotypeScore=92.8363;InbreedingCoeff=0.3419;MQ=51.74;MQ0=39;MQRankSum=1.946;QD=5.47;ReadPosRankSum=-0.682;VQSLOD=1.9960;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:29:1.04:0,1,153	1/1:2,2:5:2.79:48,3,0	0/0:45,0:3:0:0,0,0	./.	0/0:9,0:11:6:0,6,67	0/1:7,0:7:0:0,0,0	0/1:8,0:17:0:0,0,0	./.	./.	1/1:16,5:20:8.55:144,9,0	1/1:7,6:13:8.89:129,9,0	1/1:2,4:6:5.82:95,6,0	0/1:7,1:8:8.96:79,0,9	1/1:4,4:9:7.98:100,8,0	./.	1/1:3,2:5:6.02:95,6,0	1/1:6,17:23:12.04:176,12,0	1/1:12,17:29:18.06:272,18,0	0/0:14,0:17:19.72:0,20,310	0/0:11,0:11:6.01:0,6,70	0/0:37,0:55:5.64:0,6,76	0/1:7,5:12:0.10:0,0,0	0/0:5,4:8:0:0,0,0	1/1:11,25:36:11.54:322,12,0	0/1:9,0:18:0.07:0,0,35	0/1:17,0:23:9.06:9,0,516	0/1:5,0:7:1.08:1,0,55	0/1:2,0:5:9.64:10,0,30
chr10	9790576	.	C	CCGCG	225.28	PASS	AB=1.000;AC=12;AF=0.250;AN=48;BaseQRankSum=3.188;DP=292;FS=1.384;HRun=0;HaplotypeScore=79.1956;InbreedingCoeff=0.5185;MQ=52.44;MQ0=10;MQRankSum=-3.254;QD=3.63;ReadPosRankSum=1.198;VQSLOD=1.7472;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:14,6:19:2.99:74,3,0	0/0:4,0:4:2.98:0,3,22	./.	0/1:6,0:1:0:0,0,0	0/0:2,0:2:0:0,0,0	0/0:5,0:5:12.04:0,12,198	0/0:19,0:18:24.08:0,24,398	0/0:8,0:7:6.02:0,6,99	./.	0/0:13,0:13:15.01:0,15,205	0/0:6,0:6:3.01:0,3,44	0/0:5,0:5:2.88:0,3,47	0/0:5,0:5:3.01:0,3,48	0/1:5,0:5:0:0,0,0	./.	./.	0/0:25,0:25:27.07:0,27,419	0/0:20,0:20:24.08:0,24,396	0/0:11,0:11:13.82:0,14,205	0/0:8,0:8:12.01:0,12,127	0/0:40,0:37:18.13:0,18,235	0/0:7,0:7:5.89:0,6,99	0/0:6,0:6:3.01:0,3,50	0/0:38,0:38:45.13:0,45,717	1/1:11,1:12:3.01:74,3,0	1/1:10,1:12:14.85:153,15,0	1/1:2,1:3:3.01:40,3,0	1/1:3,0:3:1.25:3,1,0
chr10	9791297	.	AAAAGATACCCCG	A	2550.78	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.397;DP=684;FS=1.569;HRun=0;HaplotypeScore=228.0534;InbreedingCoeff=0.9970;MQ=91.31;MQ0=0;MQRankSum=-6.232;QD=55.45;ReadPosRankSum=-0.271;VQSLOD=3.1473;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,114,6400	0/0:12,0:12:33.11:0,33,1995	0/0:29,0:29:84.27:0,84,3909	0/0:28,0:28:72.20:0,72,3529	0/0:21,0:21:60.16:0,60,3278	0/0:14,0:14:42.14:0,42,2602	0/0:32,0:32:90.31:0,90,5236	0/0:34,0:34:99:0,99,5005	0/0:25,0:25:69.24:0,69,4138	0/0:22,0:22:66.23:0,66,3760	0/0:19,0:19:54.18:0,54,2867	0/0:30,0:30:87.28:0,87,4677	0/0:22,0:22:66.23:0,66,4042	0/0:25,0:25:72.25:0,72,4267	0/0:31,0:31:93.32:0,93,5610	0/0:18,0:18:51.18:0,51,2930	0/0:46,0:46:99:0,138,7835	0/0:27,0:27:81.28:0,81,4635	1/1:4,7:11:21.02:464,21,0	1/1:5,13:18:39.13:1469,39,0	1/1:4,13:17:21.07:760,21,0	0/0:22,0:22:66.22:0,66,3758	0/0:18,0:18:48.16:0,48,2878	0/0:33,0:33:99:0,99,5556	0/0:22,0:22:66.23:0,66,3769	0/0:27,0:27:78.27:0,78,4610	0/0:20,0:20:57.20:0,57,3086	0/0:22,0:22:66.23:0,66,3800
chr10	9791548	.	T	TCCCCTCTCTTC	18347.01	PASS	AB=0.583;AC=23;AF=0.411;AN=56;BaseQRankSum=-7.291;DP=578;FS=19.047;HRun=0;HaplotypeScore=157.0561;InbreedingCoeff=0.9150;MQ=73.04;MQ0=4;MQRankSum=-12.231;QD=83.78;ReadPosRankSum=1.321;VQSLOD=3.6925;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,13:23:42.08:2039,42,0	0/0:7,0:7:15.05:0,15,440	0/0:33,0:24:49.22:0,49,1498	0/0:45,0:29:47.04:0,47,1122	1/1:6,13:21:48.16:2215,48,0	1/1:6,10:16:24.08:1187,24,0	1/1:13,4:22:56.97:2205,57,0	0/0:24,0:24:54.14:0,54,1427	1/1:1,16:26:39.13:2126,39,0	0/0:15,0:15:45.11:0,45,1325	0/0:10,0:10:24.08:0,24,767	0/0:20,0:20:54.17:0,54,1673	0/0:19,0:19:54.18:0,54,1677	0/0:20,0:20:48.13:0,48,1290	0/0:30,0:30:78.26:0,78,2515	0/0:19,0:19:54.18:0,54,1728	0/0:29,0:29:69.22:0,69,2055	0/0:23,0:23:66.22:0,66,1978	1/1:4,9:17:42.14:1457,42,0	1/1:2,6:11:15.52:611,16,0	1/1:9,3:20:16.30:487,16,0	0/0:20,0:20:60.20:0,60,1854	0/0:12,0:12:30.10:0,30,1002	0/0:32,0:32:87.21:0,87,2605	1/1:1,9:10:27.09:1416,27,0	0/1:6,11:21:46.02:2172,0,46	1/1:3,15:19:33.05:1851,33,0	1/1:2,8:13:12.04:581,12,0
chr10	9791697	.	T	TC	1384.09	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-4.555;DP=498;FS=1.307;HRun=5;HaplotypeScore=76.8941;InbreedingCoeff=0.9448;MQ=78.01;MQ0=4;MQRankSum=-2.071;QD=22.32;ReadPosRankSum=-1.130;VQSLOD=2.4858;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:42.11:0,42,451	0/0:10,0:10:18.04:0,18,193	0/0:41,0:30:51.52:0,52,434	0/0:58,0:25:30.14:0,30,390	0/0:11,0:11:24.06:0,24,257	1/1:3,10:13:24.08:316,24,0	1/1:6,21:26:53.63:658,54,0	0/0:18,0:18:30.04:0,30,304	1/1:3,19:22:42.14:552,42,0	0/0:23,0:23:66.15:0,66,702	0/0:14,0:14:33.08:0,33,353	0/0:13,0:13:36.09:0,36,386	0/0:15,0:15:42.10:0,42,451	0/0:17,0:17:48.12:0,48,515	0/0:21,0:21:54.13:0,54,580	0/0:16,1:17:5.63:0,6,403	0/0:16,0:16:27.16:0,27,365	0/0:15,0:15:42.10:0,42,451	0/0:5,0:5:12.03:0,12,129	0/0:11,0:11:27.07:0,27,289	0/0:14,0:14:29.57:0,30,321	0/0:12,0:12:30.07:0,30,322	0/0:15,0:15:39.10:0,39,419	0/0:12,0:12:33.08:0,33,349	0/0:12,0:12:30.07:0,30,322	0/0:18,0:18:51.13:0,51,548	0/0:19,0:19:54.14:0,54,580	0/0:11,0:11:30.08:0,30,322
chr10	9792136	.	TTAATAA	T	428.85	PASS	AC=6;AF=0.125;AN=48;BaseQRankSum=4.503;DP=242;FS=0.000;HRun=0;HaplotypeScore=51.4610;InbreedingCoeff=0.6069;MQ=78.40;MQ0=1;MQRankSum=-3.064;QD=17.15;ReadPosRankSum=-1.521;VQSLOD=2.0057;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:33.09:0,33,917	0/0:4,0:4:12.04:0,12,395	./.	0/0:8,0:7:3.01:0,3,98	0/0:10,0:10:15.04:0,15,411	0/0:4,0:7:15.04:0,15,321	./.	0/0:25,0:25:30.10:0,30,978	0/0:2,0:5:3.01:0,3,78	0/0:3,0:3:3.01:0,3,99	0/0:6,0:7:15:0,15,407	0/0:9,0:9:12.04:0,12,395	0/0:5,0:5:6.02:0,6,174	0/0:9,0:9:15.05:0,15,491	0/0:10,0:10:18.06:0,18,586	0/0:9,0:9:15.05:0,15,492	0/0:29,0:29:66.21:0,66,2094	0/0:11,0:11:27.09:0,27,846	1/1:10,7:17:21.02:359,21,0	1/1:3,2:5:3.01:63,3,0	1/1:1,2:3:6.02:125,6,0	./.	0/0:12,0:12:21.07:0,21,691	0/0:5,0:5:3.01:0,3,99	0/0:10,0:10:18.06:0,18,589	0/0:6,0:6:12.04:0,12,394	0/0:8,0:8:21.07:0,21,691	./.
chr10	9793156	.	CAGTT	C	1782.21	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=7.413;DP=426;FS=6.647;HRun=0;HaplotypeScore=74.3803;InbreedingCoeff=0.8766;MQ=68.83;MQ0=0;MQRankSum=-4.187;QD=44.56;ReadPosRankSum=-1.376;VQSLOD=3.1424;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:54.19:0,54,1474	0/0:9,0:9:27.09:0,27,734	0/0:9,0:9:21.03:0,21,403	0/0:10,0:10:2.39:0,2,94	0/0:14,0:14:42.14:0,42,1150	0/0:19,0:19:57.20:0,57,1560	0/0:14,0:14:42.14:0,42,1127	0/0:18,0:18:54.16:0,54,1278	0/0:15,0:15:45.15:0,45,1232	0/0:20,0:20:60.21:0,60,1625	0/0:13,0:13:39.12:0,39,1010	0/0:26,0:26:75.24:0,75,1847	0/0:16,0:16:48.16:0,48,1258	0/0:24,0:24:66.20:0,66,1693	0/0:22,0:22:66.22:0,66,1752	0/0:13,0:13:36.12:0,36,944	0/0:21,0:21:60.21:0,60,1598	0/0:14,0:13:33.11:0,33,904	1/1:1,10:11:30.06:540,30,0	1/1:0,9:10:27.09:522,27,0	1/1:2,17:19:45.15:862,45,0	0/0:6,0:6:18.06:0,18,461	0/0:9,0:9:27.09:0,27,739	0/0:23,0:23:66.23:0,66,1758	0/0:14,0:14:39.13:0,39,1067	0/0:17,0:17:51.18:0,51,1358	0/0:18,0:18:54.15:0,54,1321	0/0:3,0:3:3.01:0,3,82
chr10	9793308	.	GGAA	G	1849.41	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.917;DP=509;FS=11.351;HRun=0;HaplotypeScore=76.7495;InbreedingCoeff=0.9245;MQ=70.59;MQ0=0;MQRankSum=-1.927;QD=34.89;ReadPosRankSum=-0.973;VQSLOD=2.9325;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:65.38:0,65,1296	0/0:7,0:7:21.07:0,21,467	0/0:21,0:17:1.91:0,2,569	0/0:35,0:23:46.24:0,46,1177	0/0:8,0:8:24.08:0,24,536	0/0:19,0:19:57.15:0,57,1224	0/0:30,0:30:75.23:0,75,1585	0/0:22,0:22:57.19:0,57,1233	0/0:24,0:24:69.21:0,69,1453	0/0:17,0:17:38.59:0,39,867	0/0:6,0:6:18.06:0,18,401	0/0:26,0:26:75.26:0,75,1675	0/0:15,0:15:42.11:0,42,848	0/0:15,0:15:45.12:0,45,937	0/0:25,0:25:66.21:0,66,1431	0/0:19,0:19:54.15:0,54,1103	0/0:17,0:17:51.18:0,51,1137	0/0:19,0:19:54.05:0,54,1002	1/1:6,11:17:36.12:572,36,0	1/1:1,12:13:39.13:613,39,0	1/1:0,23:23:50.31:807,50,0	0/0:9,0:9:20.44:0,20,468	0/0:11,0:11:30.10:0,30,663	0/0:15,0:15:42.13:0,42,876	0/0:15,0:15:45.15:0,45,985	0/0:15,0:15:42.14:0,42,897	0/0:22,0:22:63.22:0,63,1361	0/0:19,0:19:54.14:0,54,1101
chr10	9795401	.	ACT	A	647.74	PASS	AB=0.921;AC=18;AF=0.360;AN=50;BaseQRankSum=-0.034;DP=553;FS=0.000;HRun=0;HaplotypeScore=91.8073;InbreedingCoeff=0.4273;MQ=66.26;MQ0=14;MQRankSum=1.054;QD=2.85;ReadPosRankSum=2.553;VQSLOD=1.6909;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:26,1:27:14.58:15,0,170	0/0:9,0:12:6.01:0,6,69	./.	./.	1/1:16,7:21:18.04:189,18,0	1/1:12,0:20:5.68:28,6,0	0/0:16,0:15:0:0,0,0	0/0:33,0:32:10.27:0,10,107	1/1:8,0:17:11.36:56,11,0	0/0:18,0:19:24:0,24,252	0/0:21,0:26:3.59:0,4,48	0/0:8,0:12:11.99:0,12,121	0/0:13,0:19:11.65:0,12,131	0/1:11,0:16:16.62:17,0,106	0/0:10,0:15:11.84:0,12,121	0/0:9,0:17:18:0,18,157	0/0:16,0:26:24.02:0,24,235	0/0:15,0:24:20.37:0,20,175	./.	1/1:16,0:20:8.52:42,9,0	1/1:18,0:21:5.68:28,6,0	0/0:14,0:20:21.02:0,21,235	0/1:13,0:13:0.03:0,0,0	0/0:20,0:21:17.94:0,18,178	0/1:12,2:19:4.57:109,0,5	0/1:14,2:16:16.11:66,0,16	1/1:5,12:17:20.69:228,21,0	0/1:15,1:14:20.09:36,0,20
chr10	9795543	.	TTCTGC	T	9567.72	PASS	AB=1.000;AC=25;AF=0.446;AN=56;BaseQRankSum=13.946;DP=499;FS=1.627;HRun=0;HaplotypeScore=101.1111;InbreedingCoeff=0.9391;MQ=93.13;MQ0=0;MQRankSum=-6.399;QD=44.92;ReadPosRankSum=3.132;VQSLOD=5.2143;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,25:27:60.21:1243,60,0	0/0:11,0:11:33.11:0,33,1007	0/0:16,0:16:42.13:0,42,1175	0/0:31,0:31:78.27:0,78,2127	1/1:1,20:21:54.06:969,54,0	1/1:2,18:20:48.16:995,48,0	1/1:1,11:12:27.09:559,27,0	0/0:23,0:23:48.16:0,48,1335	1/1:2,13:15:36.12:746,36,0	0/0:20,0:20:48.16:0,48,1459	0/0:16,0:16:45.14:0,45,1315	0/0:19,0:19:48.15:0,48,1385	0/0:12,0:12:24.04:0,24,658	0/0:14,0:14:39.13:0,39,1178	0/0:16,0:16:45.15:0,45,1359	0/1:15,0:15:6.33:6,0,1156	0/0:33,0:33:93.30:0,93,2822	0/0:22,0:22:60.21:0,60,1822	1/1:0,9:9:27.09:547,27,0	1/1:3,12:15:36.08:703,36,0	1/1:4,10:14:24.08:497,24,0	0/0:10,0:10:30.10:0,30,880	0/0:21,0:21:60.21:0,60,1837	0/0:22,0:22:54.19:0,54,1641	1/1:1,12:13:33.11:684,33,0	1/1:4,17:21:51.11:941,51,0	1/1:5,20:25:63.22:1305,63,0	1/1:0,6:6:18.06:373,18,0
chr10	9795602	.	CTA	C	95.24	PASS	AB=0.954;AC=7;AF=0.125;AN=56;BaseQRankSum=1.880;DP=436;FS=9.917;HRun=0;HaplotypeScore=101.3173;InbreedingCoeff=-0.1773;MQ=67.71;MQ0=12;MQRankSum=-0.615;QD=0.78;ReadPosRankSum=-1.301;VQSLOD=1.2259;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:36.38:0,36,407	0/0:7,0:7:1.32:0,1,89	0/0:18,0:12:26.42:0,26,252	0/0:31,0:20:28.14:0,28,374	0/0:13,0:13:17.57:0,18,133	0/0:16,0:16:34.34:0,34,277	0/0:17,0:17:29.75:0,30,225	0/0:22,0:22:62.93:0,63,565	0/0:6,0:5:6.48:0,6,17	0/1:18,0:18:9.30:9,0,276	0/1:8,4:12:39.33:39,0,104	0/1:16,0:16:14.88:15,0,202	0/0:9,0:9:5.70:0,6,104	0/0:7,0:7:12.17:0,12,109	0/1:12,0:13:54.27:54,0,135	0/1:12,0:12:49.07:49,0,51	0/1:29,0:28:28.22:28,0,391	0/0:20,0:19:19.74:0,20,243	0/0:12,0:13:7.37:0,7,227	0/0:14,0:13:14.94:0,15,119	0/0:18,0:18:27.61:0,28,207	0/0:12,0:11:2.84:0,3,114	0/0:13,0:13:4.34:0,4,179	0/1:22,0:22:25.94:26,0,120	0/0:12,0:12:20.82:0,21,165	0/0:17,0:17:43.77:0,44,376	0/0:13,0:13:29.97:0,30,270	0/0:6,0:6:17.47:0,17,154
chr10	9795603	.	TAC	T	1711.98	PASS	AB=0.850;AC=41;AF=0.854;AN=48;BaseQRankSum=2.506;DP=435;FS=17.246;HRun=0;HaplotypeScore=95.4594;InbreedingCoeff=-0.1465;MQ=66.47;MQ0=13;MQRankSum=1.945;QD=4.88;ReadPosRankSum=-4.248;VQSLOD=0.1458;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:27,1:30:22.03:78,0,22	1/1:4,3:7:3.01:32,3,0	./.	./.	1/1:12,0:13:2.84:14,3,0	0/1:13,0:15:13.77:15,0,14	1/1:16,0:16:1.82:5,2,0	./.	1/1:3,0:6:11.36:56,11,0	1/1:13,5:18:15.26:122,15,0	1/1:9,1:11:6.01:58,6,0	0/1:13,3:16:44.09:101,0,44	0/1:5,4:9:26.53:27,0,38	1/1:7,0:7:10.86:66,11,0	1/1:8,3:13:14.83:131,15,0	1/1:8,4:12:23.89:241,24,0	1/1:24,4:28:23.94:225,24,0	1/1:11,7:18:8.86:79,9,0	1/1:13,0:14:14.35:58,14,0	./.	1/1:16,0:18:1.93:13,2,0	1/1:8,4:11:2.43:59,2,0	1/1:9,2:12:8.86:79,9,0	1/1:18,4:24:37.13:323,37,0	1/1:12,0:12:2.74:12,3,0	0/1:16,0:17:20.99:21,0,49	0/1:12,0:13:14.52:18,0,15	0/1:4,0:6:5.21:5,0,30
chr10	9795944	.	T	TAGGATAAAATGGCGGTCTCC	53693.97	PASS	AB=0.957;AC=25;AF=0.446;AN=56;BaseQRankSum=2.862;DP=687;FS=1.327;HRun=0;HaplotypeScore=336.0761;InbreedingCoeff=0.9267;MQ=78.60;MQ0=0;MQRankSum=-19.801;QD=163.70;ReadPosRankSum=1.333;VQSLOD=4.1807;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:19,13:36:81.28:6612,81,0	0/0:9,0:9:27.09:0,27,1302	0/0:24,0:24:63.16:0,63,2414	0/0:25,0:25:63.17:0,63,2247	1/1:17,6:24:45.15:2914,45,0	1/1:20,0:32:81.28:6080,81,0	1/1:23,0:31:87.30:5791,87,0	0/0:26,0:26:63.22:0,63,2846	1/1:29,0:43:99:8451,111,0	0/0:33,0:33:84.29:0,84,4352	0/0:14,0:14:36.12:0,36,1876	0/0:32,0:32:90.31:0,90,4385	0/0:33,0:33:87.27:0,87,4247	0/0:26,0:26:69.24:0,69,3651	0/0:29,0:29:81.26:0,81,4211	0/1:21,0:22:99:208,0,2571	0/0:19,0:19:54.13:0,54,2521	0/0:18,0:18:48.16:0,48,2375	1/1:14,2:18:45.14:2555,45,0	1/1:10,2:13:30.10:2169,30,0	1/1:12,2:17:24.08:1753,24,0	0/0:23,0:23:63.22:0,63,3144	0/0:21,0:21:57.20:0,57,2769	0/0:27,0:27:69.22:0,69,3464	1/1:12,4:18:45.15:2849,45,0	1/1:15,7:23:48.15:3495,48,0	1/1:24,14:40:99:8972,108,0	1/1:4,3:10:21.07:1847,21,0
chr10	9796738	.	A	AGGGGTTAG	4277.98	PASS	AC=20;AF=0.385;AN=52;BaseQRankSum=-1.506;DP=215;FS=47.994;HRun=0;HaplotypeScore=52.3326;InbreedingCoeff=0.8483;MQ=61.52;MQ0=6;MQRankSum=-8.332;QD=62.91;ReadPosRankSum=-1.683;VQSLOD=2.6461;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,6:13:21.07:684,21,0	0/0:6,0:6:18.06:0,18,503	0/0:14,0:7:14.47:0,14,376	0/0:18,0:13:28.52:0,29,559	1/1:5,2:5:9.03:237,9,0	./.	1/1:1,1:3:3.01:132,3,0	0/0:16,0:15:45.13:0,45,1038	1/1:1,6:9:12.04:464,12,0	0/0:10,0:10:30.09:0,30,779	0/0:8,0:8:24.08:0,24,654	0/0:8,0:8:24.07:0,24,590	0/0:6,0:6:18.06:0,18,484	0/0:8,0:8:24.08:0,24,671	0/0:11,0:10:27.09:0,27,755	0/0:6,0:5:15.05:0,15,410	0/0:2,0:2:6.02:0,6,168	0/0:10,0:8:24.08:0,24,644	1/1:4,1:4:3.01:132,3,0	1/1:1,0:1:3.01:55,3,0	1/1:1,1:3:6.02:185,6,0	0/0:9,0:9:21.07:0,21,496	0/0:10,0:10:27.09:0,27,711	0/0:5,0:5:12.04:0,12,333	1/1:3,6:10:27.05:987,27,0	1/1:4,3:6:12.04:414,12,0	1/1:2,6:8:24.08:987,24,0	./.
chr10	9796924	.	CG	C	6002.82	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=10.793;DP=514;FS=1.578;HRun=6;HaplotypeScore=52.7695;InbreedingCoeff=0.9882;MQ=89.31;MQ0=0;MQRankSum=-1.776;QD=28.05;ReadPosRankSum=2.543;VQSLOD=5.4562;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,33:33:84.21:901,84,0	0/0:3,0:3:9.03:0,9,118	0/0:21,0:21:60.17:0,60,747	0/0:26,0:26:57.18:0,57,736	1/1:0,14:14:39.06:407,39,0	1/1:0,10:10:24.06:258,24,0	1/1:0,14:14:36.09:386,36,0	0/0:28,0:28:72.22:0,72,919	1/1:2,19:21:51.13:547,51,0	0/0:16,0:16:45.14:0,45,580	0/0:8,0:8:21.07:0,21,276	0/0:16,0:16:45.15:0,45,591	0/0:15,0:15:45.13:0,45,573	0/0:31,0:31:84.26:0,84,1086	0/0:15,0:15:42.14:0,42,553	0/0:13,0:13:39.13:0,39,513	0/0:23,0:23:66.21:0,66,868	0/0:25,0:25:69.22:0,69,908	1/1:1,26:27:72.18:773,72,0	1/1:0,5:5:15.04:161,15,0	1/1:1,35:36:93.23:999,93,0	0/0:19,0:19:57.14:0,57,723	0/0:16,0:16:39.13:0,39,511	0/0:25,0:25:69.12:0,69,852	1/1:1,12:13:36.09:387,36,0	1/1:0,17:17:48.11:508,48,0	1/1:0,15:15:42.11:450,42,0	1/1:1,7:8:21.05:226,21,0
chr10	9798613	.	C	CGGAG	462.96	PASS	AB=0.971;AC=17;AF=0.304;AN=56;BaseQRankSum=6.350;DP=300;FS=4.951;HRun=0;HaplotypeScore=65.3894;InbreedingCoeff=-0.2510;MQ=54.00;MQ0=15;MQRankSum=1.427;QD=2.95;ReadPosRankSum=-4.796;VQSLOD=-0.0312;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:21,0:21:58.34:58,0,100	1/1:3,0:3:3:25,3,0	0/0:23,0:5:13.62:0,14,93	0/0:26,0:8:0.72:0,1,20	0/1:7,0:7:18.50:19,0,18	0/0:6,0:5:8.86:0,9,69	0/0:14,0:12:11.48:0,11,83	0/1:19,0:16:22.86:23,0,228	0/0:8,0:8:5.96:0,6,49	0/1:9,2:12:52.78:53,0,149	0/1:6,0:6:12.99:13,0,57	0/0:10,0:9:2.35:0,2,100	0/1:6,0:5:33.93:35,0,34	0/1:11,2:14:29.61:30,0,126	0/0:6,0:6:9.46:0,9,76	0/1:10,0:10:29.14:79,0,29	0/1:19,0:19:99:112,0,137	1/1:3,0:3:5.81:64,6,0	0/0:13,0:10:22.16:0,22,169	0/0:7,0:6:2.04:0,2,25	0/0:6,0:5:4.41:0,4,63	0/1:8,0:8:2.98:3,0,69	0/0:6,0:6:1.72:0,2,6	0/1:10,0:10:19.02:43,0,19	0/1:11,0:11:33.37:33,0,36	0/1:8,0:8:22.42:22,0,108	0/0:13,0:13:20.15:0,20,146	0/0:5,0:5:5.45:0,5,57
chr10	9798614	.	G	GGA	1358.65	PASS	AB=1.000;AC=46;AF=0.920;AN=50;BaseQRankSum=-2.422;DP=327;FS=5.947;HRun=0;HaplotypeScore=64.8627;InbreedingCoeff=0.1999;MQ=51.24;MQ0=15;MQRankSum=2.102;QD=5.03;ReadPosRankSum=0.060;VQSLOD=1.8036;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:16,6:22:3.75:67,4,0	1/1:3,0:3:3:26,3,0	./.	0/1:25,0:7:0:0,0,0	1/1:8,1:9:9.48:115,9,0	./.	1/1:15,0:13:5.95:43,6,0	1/1:20,0:17:15.01:165,15,0	1/1:8,0:8:2.84:30,3,0	1/1:13,0:14:11.62:118,12,0	1/1:8,0:7:2.37:8,2,0	1/1:10,0:9:7.53:65,8,0	1/1:7,0:6:2.99:25,3,0	1/1:13,0:14:3.01:31,3,0	1/1:8,0:8:3.01:45,3,0	1/1:5,1:12:12.02:142,12,0	1/1:10,7:20:18.02:211,18,0	1/1:1,1:3:9.02:109,9,0	./.	1/1:9,0:8:0.47:1,0,0	1/1:8,0:7:2.99:31,3,0	1/1:10,0:10:3.01:42,3,0	0/1:7,0:7:0:0,0,0	1/1:3,5:10:6.01:71,6,0	1/1:13,0:13:0.54:43,1,0	1/1:10,0:10:6.27:34,6,0	0/0:8,0:15:2.79:0,3,17	1/1:5,0:5:2.99:24,3,0
chr10	9800111	.	A	AGG	2791.46	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.730;DP=760;FS=1.741;HRun=0;HaplotypeScore=97.2384;InbreedingCoeff=0.9996;MQ=59.20;MQ0=1;MQRankSum=-0.965;QD=42.95;ReadPosRankSum=0.372;VQSLOD=5.1091;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:56:99:0,160,2594	0/0:15,0:15:45.15:0,45,723	0/0:37,0:30:87.29:0,87,1402	0/0:21,0:19:51.64:0,52,822	0/0:14,0:14:42.14:0,42,685	0/0:20,0:20:57.19:0,57,930	0/0:31,0:31:90.29:0,90,1436	0/0:25,0:25:69.23:0,69,1104	0/0:27,0:27:81.26:0,81,1291	0/0:25,0:25:75.26:0,75,1222	0/0:13,0:13:39.13:0,39,635	0/0:40,0:40:99:0,120,1879	0/0:36,0:36:99:0,105,1686	0/0:40,0:40:99:0,120,1932	0/0:38,0:38:99:0,114,1783	0/0:19,0:19:57.17:0,57,882	0/0:32,0:32:96.33:0,96,1553	0/0:22,0:22:63.20:0,63,1003	1/1:0,14:15:45.05:727,45,0	1/1:0,18:19:48.12:866,48,0	1/1:1,30:30:68.92:1341,69,0	0/0:24,0:24:66.21:0,66,1044	0/0:26,0:26:72.22:0,72,1147	0/0:40,0:40:99:0,114,1857	0/0:20,0:20:57.19:0,57,929	0/0:33,0:33:96.33:0,96,1566	0/0:32,0:32:96.28:0,96,1509	0/0:9,0:9:27.09:0,27,441
chr10	9800427	.	TACACACAC	T	2558.91	PASS	AB=0.807;AC=27;AF=0.519;AN=52;BaseQRankSum=1.006;DP=483;FS=9.272;HRun=0;HaplotypeScore=142.8605;InbreedingCoeff=0.1079;MQ=61.74;MQ0=4;MQRankSum=-3.152;QD=7.90;ReadPosRankSum=-2.342;VQSLOD=1.7250;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:7,13:20:13.95:141,0,14	1/1:7,0:7:9:135,9,0	./.	./.	1/1:7,8:16:6.02:85,6,0	0/0:9,0:16:3.21:0,3,105	0/0:14,0:32:5.84:0,6,119	0/1:27,0:26:11.82:12,0,18	0/0:4,0:11:8.98:0,9,73	1/1:11,8:19:16.52:432,17,0	0/1:8,2:10:8.66:23,0,9	1/1:10,11:23:14.75:343,15,0	1/1:7,4:10:3.01:75,3,0	1/1:11,4:15:3.01:75,3,0	1/1:6,10:16:12.51:280,13,0	1/1:5,12:17:8.99:225,9,0	0/1:12,12:24:42.08:135,0,42	0/1:12,7:18:12.92:275,0,13	0/1:20,0:19:6.29:12,0,6	0/0:12,0:12:16.23:0,16,258	0/0:23,0:23:17.37:0,17,162	0/1:9,6:17:16.59:69,0,17	0/0:8,11:20:2.67:0,3,25	1/1:16,11:27:2.85:75,3,0	0/0:6,6:12:5.98:0,6,65	0/1:12,3:15:26.47:189,0,26	0/1:18,2:20:19.36:139,0,19	0/0:1,0:1:2.60:0,3,10
chr10	9800792	.	GT	G	7590	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=13.064;DP=626;FS=2.650;HRun=2;HaplotypeScore=62.2666;InbreedingCoeff=0.9736;MQ=86.96;MQ0=0;MQRankSum=-1.349;QD=35.14;ReadPosRankSum=4.848;VQSLOD=5.2371;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,36:36:99:1324,102,0	0/0:15,0:15:45.14:0,45,655	0/0:21,0:21:56.90:0,57,784	0/0:23,0:23:66.19:0,66,948	1/1:0,26:26:72.23:935,72,0	1/1:0,20:20:48.16:623,48,0	1/1:0,21:21:54.18:701,54,0	0/0:34,0:34:96.31:0,96,1405	1/1:0,26:26:78.25:1013,78,0	0/0:25,0:25:72.24:0,72,1064	0/0:19,0:19:57.19:0,57,854	0/0:20,0:20:57.18:0,57,836	0/0:23,0:23:69.23:0,69,1030	0/0:29,0:29:87.28:0,87,1283	0/0:20,0:20:60.18:0,60,859	0/0:19,0:19:54.15:0,54,752	0/0:32,0:32:96.32:0,96,1434	0/0:13,0:13:39.13:0,39,580	0/0:16,0:16:48.16:0,48,719	0/0:15,0:15:45.11:0,45,648	0/0:21,0:21:60.17:0,60,856	0/0:24,0:24:66.22:0,66,989	0/0:19,0:19:57.18:0,57,834	0/0:22,0:22:66.18:0,66,944	1/1:0,20:20:57.19:740,57,0	1/1:2,29:31:3.30:1008,3,0	1/1:0,26:26:66.21:857,66,0	1/1:0,10:10:30.10:389,30,0
chr10	9801972	.	ATAT	A	2170.18	PASS	AB=0.531;AC=24;AF=0.462;AN=52;BaseQRankSum=8.863;DP=263;FS=2.976;HRun=0;HaplotypeScore=41.2359;InbreedingCoeff=0.6290;MQ=65.93;MQ0=1;MQRankSum=-0.733;QD=16.20;ReadPosRankSum=4.121;VQSLOD=2.8880;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,21:23:45.15:647,45,0	0/0:5,0:5:6.02:0,6,122	1/1:6,0:6:2.92:18,3,0	0/0:6,0:5:6.02:0,6,107	1/1:5,0:5:3:27,3,0	1/1:2,9:11:21.07:302,21,0	1/1:1,0:1:3.01:43,3,0	0/0:34,0:34:20.06:0,20,1072	1/1:2,4:6:12.04:173,12,0	0/0:8,0:8:9.03:0,9,171	0/0:11,0:11:18.06:0,18,337	0/0:4,0:4:6.02:0,6,114	0/0:7,0:7:18.06:0,18,346	0/0:5,0:5:9.03:0,9,175	0/0:5,0:5:15.05:0,15,306	0/0:2,0:2:3.01:0,3,52	0/0:19,0:19:45.15:0,45,872	0/0:15,0:15:33.11:0,33,637	1/1:7,0:18:17.79:111,18,0	0/1:1,0:9:12.76:84,0,13	1/1:3,0:6:0.47:1,0,0	./.	0/0:6,0:6:15.05:0,15,270	./.	1/1:5,4:9:9.03:129,9,0	0/1:1,7:8:37.14:259,0,37	1/1:8,14:22:24.08:345,24,0	1/1:2,7:9:15.05:216,15,0
chr10	9804238	.	CT	C	5643.12	PASS	AB=0.955;AC=25;AF=0.446;AN=56;BaseQRankSum=13.358;DP=567;FS=10.142;HRun=9;HaplotypeScore=66.8634;InbreedingCoeff=0.9426;MQ=84.67;MQ0=0;MQRankSum=-0.933;QD=20.67;ReadPosRankSum=2.022;VQSLOD=5.2113;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,34:35:70.33:801,70,0	0/0:7,0:7:18.05:0,18,208	0/1:20,1:21:0.82:1,0,376	0/0:16,2:18:32.41:0,32,317	1/1:0,13:13:35.88:309,36,0	1/1:0,22:22:57.03:522,57,0	1/1:5,16:21:42.01:384,42,0	0/0:29,1:30:50.75:0,51,822	1/1:1,26:27:75.04:686,75,0	0/0:19,1:20:26.67:0,27,543	0/0:8,0:8:24.06:0,24,269	0/0:22,0:22:66.18:0,66,751	0/0:18,0:18:51.15:0,51,588	0/0:25,0:25:63.19:0,63,727	0/0:22,0:22:66.18:0,66,752	0/0:18,0:18:51.14:0,51,579	0/0:21,0:21:54.15:0,54,613	0/0:17,0:17:39.12:0,39,450	1/1:5,21:26:63.01:572,63,0	1/1:0,18:18:47.96:429,48,0	1/1:1,29:30:81.04:741,81,0	0/0:20,0:20:54.16:0,54,623	0/0:14,0:14:36.09:0,36,405	0/0:34,0:33:90.25:0,90,1020	1/1:1,10:11:21.01:192,21,0	1/1:4,17:21:19.40:428,19,0	1/1:2,21:23:57.03:522,57,0	1/1:0,5:5:6:55,6,0
chr10	9806211	.	ACATGG	A	4861.46	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=11.996;DP=689;FS=7.761;HRun=0;HaplotypeScore=126.7033;InbreedingCoeff=0.9863;MQ=88.08;MQ0=0;MQRankSum=-3.444;QD=59.29;ReadPosRankSum=2.336;VQSLOD=5.6819;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,144,4782	0/0:4,0:4:12.04:0,12,400	0/0:22,0:22:63.16:0,63,1680	0/0:32,0:32:95.69:0,96,2648	0/0:24,0:24:72.25:0,72,2347	0/0:21,0:21:63.22:0,63,2003	0/0:26,0:26:78.27:0,78,2458	0/0:23,0:23:69.22:0,69,2098	0/0:25,0:25:75.26:0,75,2405	0/0:21,0:21:60.21:0,60,1938	0/0:20,0:20:60.18:0,60,1855	0/0:24,0:24:72.25:0,72,2354	0/0:22,0:22:66.23:0,66,2156	0/0:22,0:22:66.23:0,66,2191	0/0:23,0:23:69.24:0,69,2291	0/0:21,0:21:63.22:0,63,2061	0/0:41,0:39:99:0,123,4028	0/0:25,0:25:75.26:0,75,2487	1/1:0,15:15:45.15:1018,45,0	1/1:0,26:26:66.23:1537,66,0	1/1:0,41:41:99:2306,100,0	0/0:24,0:24:72.23:0,72,2281	0/0:20,0:20:60.19:0,60,1909	0/0:28,0:28:84.29:0,84,2762	0/0:25,0:25:75.26:0,75,2492	0/0:35,0:35:99:0,105,3322	0/0:25,0:25:75.26:0,75,2460	0/0:6,0:6:18.06:0,18,599
chr10	9806879	.	CACACACCA	C	4994.61	PASS	AB=1.000;AC=25;AF=0.446;AN=56;BaseQRankSum=12.764;DP=1243;FS=48.267;HRun=0;HaplotypeScore=489.2436;InbreedingCoeff=-0.3805;MQ=39.79;MQ0=26;MQRankSum=-11.603;QD=5.08;ReadPosRankSum=-8.422;VQSLOD=-0.3949;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:52,0:49:48.49:48,0,1831	0/1:26,0:25:88.56:89,0,602	0/0:44,0:18:19.21:0,19,457	0/1:51,0:22:32.27:32,0,529	0/1:39,0:38:41.56:42,0,1025	1/1:23,7:28:40.35:714,40,0	1/1:37,3:38:42.95:595,43,0	0/0:48,0:33:59.90:0,60,1084	1/1:19,12:30:36.09:677,36,0	0/1:78,0:70:99:384,0,1414	0/1:44,0:44:27.67:28,0,830	0/1:49,0:47:99:136,0,643	0/1:43,0:40:99:115,0,932	0/1:58,0:50:99:100,0,647	0/1:50,0:46:99:126,0,925	0/1:38,0:37:99:217,0,514	0/1:35,0:34:99:149,0,1139	0/1:38,0:35:99:247,0,1011	0/0:24,0:22:53.21:0,53,1278	0/0:25,0:25:66.23:0,66,1888	0/0:55,0:51:99:0,129,4182	0/1:75,0:75:80.87:81,0,1345	0/1:41,0:35:99:155,0,280	0/0:61,0:58:8.94:0,9,1388	0/1:67,0:65:99:153,0,1384	0/1:56,0:54:99:525,0,1949	0/1:31,0:27:99:343,0,348	0/1:10,0:9:40.11:40,0,280
chr10	9806885	.	CCA	C	3179.44	PASS	AB=0.950;AC=24;AF=0.429;AN=56;BaseQRankSum=11.924;DP=1274;FS=44.788;HRun=0;HaplotypeScore=439.0851;InbreedingCoeff=-0.4723;MQ=38.26;MQ0=35;MQRankSum=-10.585;QD=3.16;ReadPosRankSum=-4.866;VQSLOD=0.4231;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:50,2:49:24.33:0,24,1281	0/1:23,1:25:80.27:80,0,352	0/1:50,3:16:20.68:21,0,385	0/1:55,5:20:32.08:32,0,475	0/1:34,4:38:99:101,0,539	0/1:31,0:32:48.17:377,0,48	1/1:30,8:37:36.45:522,36,0	0/0:44,1:32:66.10:0,66,883	1/1:27,1:27:13.76:282,14,0	0/1:73,4:75:99:130,0,1305	0/1:45,2:49:99:122,0,514	0/1:47,1:48:99:164,0,496	0/1:36,2:39:99:142,0,526	0/1:49,6:49:99:113,0,510	0/1:43,3:46:99:138,0,705	0/1:35,1:37:89.45:89,0,439	0/1:30,3:34:99:99,0,700	0/1:34,2:33:99:200,0,743	0/0:26,0:22:60.20:0,60,1014	0/0:27,0:27:69.02:0,69,1151	0/0:56,0:51:99:0,125,2312	0/1:63,5:76:85.81:86,0,845	0/1:36,1:33:99:159,0,128	0/0:57,2:56:6.39:0,6,1016	0/1:67,2:67:99:174,0,853	0/1:52,3:56:27.42:27,0,1502	0/1:27,1:28:99:235,0,123	0/1:9,1:9:54.25:54,0,153
chr10	9806887	.	A	AAC	6266.77	PASS	AB=0.958;AC=30;AF=0.536;AN=56;BaseQRankSum=10.723;DP=1353;FS=13.691;HRun=0;HaplotypeScore=481.8835;InbreedingCoeff=-0.3065;MQ=37.41;MQ0=40;MQRankSum=-8.718;QD=5.30;ReadPosRankSum=-4.516;VQSLOD=1.7168;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:53,0:52:46.04:46,0,437	0/1:26,1:26:64.71:220,0,65	0/0:57,0:16:8.81:0,9,75	0/1:64,0:18:25.20:30,0,25	0/1:45,0:44:19.01:19,0,253	1/1:37,0:35:7.18:133,7,0	1/1:45,1:42:5.71:103,6,0	0/1:46,2:32:65.34:189,0,65	0/1:32,0:30:25.53:68,0,26	0/1:81,7:79:16.29:862,0,16	0/1:49,4:51:66.05:331,0,66	0/1:45,6:49:16.87:330,0,17	0/1:42,2:41:18.52:526,0,19	0/1:54,5:53:22.52:183,0,23	0/1:51,2:50:39.02:316,0,39	1/1:36,1:37:8.39:279,8,0	1/1:29,6:34:11.96:450,12,0	1/1:34,2:33:6.64:297,7,0	0/0:29,0:24:17.87:0,18,179	0/0:25,0:27:41.79:0,42,448	0/0:57,0:52:90.06:0,90,1008	0/1:74,7:81:60.43:530,0,60	1/1:36,4:36:10.27:309,10,0	0/1:51,8:56:3.80:319,0,4	0/1:73,0:72:99:208,0,176	0/1:68,0:65:99:355,0,352	0/1:29,0:28:20.92:110,0,21	0/1:10,0:9:2.18:54,0,2
chr10	9806897	.	C	CACCA	9513.56	PASS	AB=0.910;AC=24;AF=0.429;AN=56;BaseQRankSum=15.785;DP=1469;FS=89.102;HRun=0;HaplotypeScore=543.5236;InbreedingCoeff=-0.6085;MQ=35.17;MQ0=56;MQRankSum=-10.765;QD=8.03;ReadPosRankSum=-2.544;VQSLOD=-0.2022;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:48,4:50:99:210,0,847	0/1:26,2:28:77.19:331,0,77	0/0:75,0:11:14.79:0,15,199	0/0:83,0:12:18.92:0,19,263	0/1:46,3:49:99:185,0,447	0/1:38,2:37:99:494,0,147	0/1:39,4:42:99:346,0,106	0/1:63,0:45:14.21:14,0,501	0/1:27,2:29:99:125,0,212	0/1:90,5:88:99:1081,0,464	0/1:50,3:56:69.16:430,0,69	0/1:51,3:53:99:442,0,121	0/1:43,2:45:99:562,0,100	0/1:59,2:54:99:506,0,107	0/1:50,0:49:99:442,0,298	0/1:38,2:39:36.13:488,0,36	0/1:35,0:35:99:374,0,311	0/1:35,0:32:99:171,0,222	0/0:33,0:27:49.31:0,49,923	0/0:27,0:27:72.23:0,72,1189	0/0:65,0:60:99:0,150,2568	0/1:73,2:84:99:485,0,226	1/1:44,2:43:13.43:243,13,0	0/1:56,0:56:99:171,0,227	0/1:59,5:71:99:782,0,360	0/1:64,6:73:99:990,0,829	0/1:22,8:30:99:544,0,122	0/1:7,0:6:82.34:97,0,82
chr10	9806925	.	CAT	C	7558.27	PASS	AB=0.866;AC=23;AF=0.411;AN=56;BaseQRankSum=5.306;DP=1601;FS=5.323;HRun=0;HaplotypeScore=516.7471;InbreedingCoeff=-0.7015;MQ=35.74;MQ0=48;MQRankSum=-6.627;QD=5.78;ReadPosRankSum=-2.830;VQSLOD=2.2922;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:41,8:47:99:361,0,481	0/1:33,3:33:99:111,0,351	0/0:91,0:14:15.62:0,16,332	0/0:96,0:12:11.85:0,12,209	0/1:41,15:51:99:224,0,455	0/1:22,15:35:99:565,0,218	0/1:37,10:43:99:468,0,200	0/1:96,21:88:99:735,0,945	0/1:24,10:30:99:291,0,265	0/1:102,14:105:99:553,0,1630	0/1:55,8:62:99:394,0,451	0/1:50,10:59:99:349,0,258	0/1:46,6:48:99:211,0,593	0/1:56,6:50:99:317,0,244	0/1:47,6:50:99:134,0,588	0/1:38,2:39:99:208,0,325	0/1:31,2:32:63.59:64,0,416	0/1:33,1:31:99:198,0,415	0/0:23,0:21:60.04:0,60,1024	0/0:27,0:26:72.23:0,72,1408	0/0:57,0:54:99:0,123,2447	0/1:82,9:88:99:488,0,726	0/1:38,8:41:99:190,0,252	0/1:46,4:51:99:125,0,125	0/1:70,17:82:99:713,0,790	0/1:69,14:79:99:555,0,1278	0/1:27,11:33:99:269,0,349	0/1:9,0:8:35.12:37,0,35
chr10	9806929	.	AAC	A	12723.86	PASS	AB=0.689;AC=25;AF=0.446;AN=56;BaseQRankSum=2.216;DP=1564;FS=9.760;HRun=0;HaplotypeScore=477.9191;InbreedingCoeff=-0.5370;MQ=36.57;MQ0=51;MQRankSum=-5.194;QD=10.07;ReadPosRankSum=-1.242;VQSLOD=3.9305;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:15,30:44:57.36:761,0,57	0/1:18,14:32:99:356,0,179	0/0:99,0:13:3.78:0,4,220	0/0:95,0:14:16.56:0,17,157	0/1:32,21:49:99:411,0,367	0/1:15,21:36:64.26:734,0,64	0/1:21,27:43:41.95:694,0,42	0/1:81,35:86:99:803,0,1011	1/1:16,16:29:28.35:553,28,0	0/1:74,31:98:99:998,0,1242	0/1:39,24:61:99:610,0,338	0/1:32,29:58:99:603,0,288	0/1:27,23:47:99:465,0,540	0/1:28,30:46:99:513,0,273	0/1:31,18:47:99:574,0,301	0/1:21,17:37:99:502,0,268	0/1:15,17:30:99:398,0,179	0/1:17,16:30:99:436,0,167	0/0:22,0:21:45.15:0,45,748	0/0:27,1:27:69.20:0,69,1108	0/0:54,2:55:99:0,102,2058	0/1:42,41:83:99:846,0,601	0/1:32,10:39:99:233,0,470	1/1:22,30:49:27.22:317,27,0	0/1:50,37:83:99:800,0,543	0/1:56,25:77:99:687,0,633	0/1:15,22:32:99:364,0,143	0/1:3,5:8:62.20:64,0,62
chr10	9808273	.	GCTC	G	3228.29	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=12.649;DP=727;FS=0.000;HRun=0;HaplotypeScore=113.1067;InbreedingCoeff=0.9996;MQ=76.08;MQ0=0;MQRankSum=-2.558;QD=42.48;ReadPosRankSum=2.044;VQSLOD=5.1325;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,132,2988	0/0:9,0:9:27.09:0,27,623	0/0:19,0:19:53.71:0,54,976	0/0:24,0:25:43.99:0,44,722	0/0:31,0:31:93.31:0,93,2100	1/1:0,17:17:48.16:746,48,0	1/1:3,26:29:78.25:1264,78,0	0/0:36,0:36:99:0,105,2391	1/1:0,30:30:84.29:1361,84,0	0/0:25,0:24:72.25:0,72,1660	0/0:24,0:24:72.25:0,72,1638	0/0:34,0:34:99:0,102,2352	0/0:21,0:21:63.20:0,63,1384	0/0:18,0:18:54.19:0,54,1245	0/0:18,0:18:54.17:0,54,1201	0/0:15,0:15:45.14:0,45,994	0/0:22,0:22:66.23:0,66,1522	0/0:20,0:20:60.17:0,60,1333	0/0:26,0:25:66.22:0,66,1452	0/0:23,0:23:66.23:0,66,1503	0/0:41,0:41:99:0,120,2768	0/0:20,0:20:60.19:0,60,1338	0/0:28,0:28:81.28:0,81,1867	0/0:42,0:42:99:0,120,2716	0/0:28,0:28:79.82:0,80,1784	0/0:34,0:34:99:0,102,2341	0/0:35,0:35:99:0,105,2412	0/0:12,0:12:36.12:0,36,830
chr10	9809590	.	T	TACACAC	9329.67	PASS	AB=0.583;AC=36;AF=0.643;AN=56;BaseQRankSum=-11.243;DP=931;FS=2.728;HRun=0;HaplotypeScore=287.6813;InbreedingCoeff=0.5744;MQ=55.51;MQ0=12;MQRankSum=-8.576;QD=14.95;ReadPosRankSum=-3.652;VQSLOD=3.6340;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:15,0:50:12.66:13,0,26	0/1:2,7:10:0:0,0,1	0/0:35,0:26:24.38:0,24,238	0/0:37,0:28:41.89:0,42,610	0/0:6,0:18:6.93:0,7,78	1/1:10,21:31:17.45:489,17,0	1/1:9,20:32:15.24:340,15,0	1/1:12,22:36:69.20:1458,69,0	1/1:12,35:52:29.73:861,30,0	1/1:7,19:27:47.98:1220,48,0	1/1:8,5:14:6.02:134,6,0	1/1:11,24:35:29.78:976,30,0	1/1:9,32:43:35.88:1097,36,0	1/1:6,26:37:11.29:402,11,0	1/1:11,23:38:16.74:602,17,0	1/1:13,32:47:10.65:383,11,0	1/1:8,15:28:18.06:357,18,0	1/1:4,15:22:24.08:619,24,0	1/1:9,0:20:0.41:35,0,0	0/0:7,0:31:7.01:0,7,20	0/0:23,0:100:2.38:0,2,168	0/0:2,18:21:0.40:0,0,1	0/1:6,8:16:0.28:0,0,1	1/1:15,11:28:5.16:201,5,0	0/0:5,0:29:8.48:0,8,26	0/1:9,0:33:6.77:101,0,7	0/0:7,0:29:7.80:0,8,65	1/1:1,0:16:0.17:40,0,0
chr10	9809907	.	A	AC	1541.29	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-5.338;DP=448;FS=7.008;HRun=7;HaplotypeScore=65.8842;InbreedingCoeff=0.9360;MQ=85.98;MQ0=2;MQRankSum=-1.458;QD=23.00;ReadPosRankSum=-0.026;VQSLOD=3.6397;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:45.03:0,45,422	0/0:8,0:8:24.04:0,24,231	0/0:30,0:23:50.20:0,50,442	0/0:42,0:30:38.81:0,39,400	0/0:9,0:9:18.03:0,18,173	1/1:3,13:16:27.08:325,27,0	1/1:8,23:31:63.15:743,63,0	0/0:18,0:18:45.06:0,45,430	1/1:3,17:20:51.16:616,51,0	0/0:10,0:10:18.02:0,18,173	0/0:2,0:2:6.01:0,6,57	0/0:25,0:25:51.07:0,51,486	0/0:17,0:17:24.02:0,24,225	0/0:13,0:13:33.05:0,33,319	0/0:16,0:16:36.05:0,36,347	0/0:10,0:10:30.05:0,30,289	0/0:14,0:14:36.06:0,36,347	0/0:16,0:16:33.04:0,33,317	0/0:21,0:21:54.08:0,54,520	0/0:10,0:10:27.03:0,27,257	0/0:20,0:21:47.10:0,47,440	0/0:14,0:14:27.04:0,27,260	0/0:5,0:5:15.02:0,15,144	0/0:22,0:22:51.53:0,52,493	0/0:10,0:10:27.04:0,27,260	0/0:10,0:10:22.44:0,22,224	0/0:9,0:9:12.02:0,12,116	0/0:9,0:9:18.03:0,18,174
chr10	9809931	.	A	AACAC	979.84	PASS	AB=1.000;AC=30;AF=0.600;AN=50;BaseQRankSum=-4.914;DP=473;FS=13.393;HRun=0;HaplotypeScore=118.4752;InbreedingCoeff=0.2713;MQ=59.97;MQ0=11;MQRankSum=3.363;QD=3.44;ReadPosRankSum=1.201;VQSLOD=1.7763;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:17:14.99:177,15,0	1/1:8,0:7:2.99:23,3,0	1/1:33,0:12:0.47:1,0,0	./.	1/1:13,0:13:4.55:66,5,0	0/0:14,0:13:8.95:0,9,74	0/0:29,0:29:5.65:0,6,32	1/1:20,0:18:2.84:9,3,0	0/0:16,0:15:11.69:0,12,94	0/1:10,0:10:17.83:18,0,31	0/1:2,0:2:2.07:2,0,14	0/0:22,0:22:2.99:0,3,23	0/0:15,0:15:2.74:0,3,12	1/1:9,0:9:3.45:23,3,0	1/1:16,0:15:5.96:44,6,0	0/1:14,0:14:0:0,0,0	0/1:16,0:16:4.20:4,0,16	0/0:19,0:19:9.97:0,10,62	./.	./.	0/1:28,0:28:0.01:0,0,0	0/1:17,0:17:9.65:10,0,73	1/1:8,0:8:8.92:63,9,0	0/1:19,0:19:49.93:71,0,50	1/1:15,0:14:12.01:140,12,0	1/1:14,0:14:18.86:174,19,0	1/1:8,4:12:4.26:73,4,0	0/1:14,0:13:4.53:227,0,5
chr10	9809959	.	CACACACACACACACAT	C	2467.43	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=-1.146;DP=561;FS=2.168;HRun=0;HaplotypeScore=200.0246;InbreedingCoeff=-0.0697;MQ=50.11;MQ0=23;MQRankSum=1.100;QD=8.25;ReadPosRankSum=-7.172;VQSLOD=0.0122;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:21,0:21:39.32:39,0,963	0/1:8,0:7:35.90:36,0,177	0/0:21,0:5:12.02:0,12,142	0/0:30,0:9:4.55:0,5,62	0/0:14,0:13:8.01:0,8,378	1/1:15,4:18:32.89:641,33,0	1/1:34,1:35:40.37:624,40,0	0/1:28,0:24:99:131,0,641	1/1:14,5:19:38.98:872,39,0	0/1:12,0:12:18.87:19,0,877	0/1:6,0:6:8.92:9,0,408	0/0:26,0:26:6.02:0,6,233	0/0:22,0:22:4.37:0,4,116	0/1:18,0:18:75.64:76,0,485	0/1:22,0:21:83.40:83,0,586	0/1:16,0:16:21.45:21,0,736	0/0:23,0:23:2.58:0,3,1439	0/0:24,0:23:15.85:0,16,393	0/0:16,0:16:35.64:0,36,281	0/0:13,0:12:23.97:0,24,356	0/0:42,0:41:84.13:0,84,2073	0/0:20,0:20:14.05:0,14,1124	0/1:10,0:10:8.03:8,0,380	0/1:30,0:29:25.71:26,0,1772	0/1:16,0:16:25.87:26,0,663	0/1:25,0:25:23.50:23,0,1468	0/1:14,0:13:0.98:1,0,506	0/0:11,0:10:17.59:0,18,1121
chr10	9809973	.	CAT	C	6386.45	PASS	AB=1.000;AC=45;AF=0.804;AN=56;BaseQRankSum=3.855;DP=578;FS=15.593;HRun=0;HaplotypeScore=93.5268;InbreedingCoeff=0.7884;MQ=64.85;MQ0=15;MQRankSum=0.090;QD=14.19;ReadPosRankSum=1.376;VQSLOD=3.8636;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:26:46.10:353,46,0	1/1:8,0:8:14.96:120,15,0	0/0:23,0:14:7.10:0,7,257	0/0:24,0:13:21.54:0,22,255	1/1:18,0:17:11.89:130,12,0	1/1:16,0:15:30.14:250,30,0	1/1:27,0:27:62.25:533,62,0	1/1:7,15:19:31.28:368,31,0	1/1:20,0:20:54.11:405,54,0	1/1:1,12:13:15.12:227,15,0	1/1:7,0:7:17.21:151,17,0	1/1:4,26:30:2.80:46,3,0	1/1:1,21:22:3.95:47,4,0	1/1:17,0:17:44.78:344,45,0	1/1:23,0:23:50.87:407,51,0	1/1:17,0:17:37.97:297,38,0	1/1:28,2:30:70.88:558,71,0	1/1:3,19:22:4.26:49,4,0	0/0:22,0:22:61.73:0,62,498	0/0:11,0:11:29.91:0,30,240	0/0:48,0:47:88.35:0,88,658	1/1:17,2:19:46.80:471,47,0	1/1:14,0:14:26.45:205,26,0	1/1:28,2:30:71.78:616,72,0	1/1:17,0:17:24.56:202,25,0	1/1:26,0:26:48.14:429,48,0	1/1:12,0:11:16.50:122,16,0	0/1:14,0:13:3.71:55,0,4
chr10	9812445	.	A	AT	13453.98	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-16.901;DP=739;FS=12.668;HRun=7;HaplotypeScore=66.0680;InbreedingCoeff=0.9945;MQ=83.98;MQ0=0;MQRankSum=-1.645;QD=30.58;ReadPosRankSum=0.463;VQSLOD=4.3323;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,126,1192	1/1:3,9:12:27.08:326,27,0	0/0:24,0:24:51.06:0,51,486	0/0:21,0:21:51.06:0,51,486	0/0:25,0:25:75.12:0,75,724	1/1:2,22:24:63.19:761,63,0	1/1:1,28:29:72.22:870,72,0	1/1:5,22:27:63.13:720,63,0	1/1:3,17:20:19.17:515,19,0	1/1:1,26:27:78.24:942,78,0	1/1:0,18:18:54.10:634,54,0	1/1:4,21:25:66.20:795,66,0	1/1:4,18:22:54.17:652,54,0	1/1:5,25:30:75.23:906,75,0	1/1:3,24:27:63.19:761,63,0	1/1:3,28:31:78.24:942,78,0	1/1:2,30:32:81.25:979,81,0	1/1:4,21:25:60.17:715,60,0	0/0:23,0:23:63.06:0,63,594	0/0:32,0:32:87.11:0,87,829	0/0:31,0:31:90.13:0,90,863	1/1:1,32:33:90.28:1087,90,0	1/1:1,27:28:75.23:906,75,0	1/1:4,26:30:78.24:942,78,0	0/0:28,0:28:81.11:0,81,777	0/0:27,0:27:66.05:0,66,627	0/0:36,0:36:99:0,102,985	0/0:4,0:4:12.02:0,12,116
chr10	9814485	.	AAC	A	3123.30	PASS	AB=0.793;AC=38;AF=0.731;AN=52;BaseQRankSum=5.853;DP=679;FS=2.748;HRun=0;HaplotypeScore=115.4365;InbreedingCoeff=0.2382;MQ=58.34;MQ0=6;MQRankSum=-1.454;QD=5.62;ReadPosRankSum=3.164;VQSLOD=3.1665;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:49:8.52:42,9,0	1/1:4,2:5:2.96:33,3,0	./.	0/0:11,0:2:0.47:0,0,1	1/1:13,0:27:5.68:28,6,0	1/1:9,7:15:3.01:33,3,0	1/1:13,11:24:18.05:199,18,0	0/1:26,1:27:51.90:69,0,52	1/1:14,17:31:24.06:265,24,0	0/1:19,3:23:13.56:211,0,14	1/1:7,15:23:38.95:390,39,0	1/1:20,9:31:9.36:217,9,0	1/1:10,5:15:2.90:33,3,0	1/1:16,5:22:8.72:62,9,0	1/1:18,11:29:22.75:292,23,0	0/1:11,11:24:18.45:200,0,18	1/1:15,8:25:26.49:256,26,0	0/0:21,0:21:27.40:0,27,333	./.	0/1:17,2:19:36.25:36,0,289	0/0:42,5:46:17.95:0,18,608	0/1:21,14:35:18.15:238,0,18	0/0:24,0:24:48.13:0,48,670	0/1:21,18:41:90.75:315,0,91	1/1:14,0:31:13.86:65,14,0	1/1:18,0:33:32.36:174,32,0	1/1:7,0:15:17.04:84,17,0	1/1:6,0:9:8.52:42,9,0
chr10	9815455	.	T	TC	22471.58	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-14.129;DP=675;FS=0.000;HRun=1;HaplotypeScore=65.4425;InbreedingCoeff=0.9995;MQ=92.93;MQ0=0;MQRankSum=-7.499;QD=40.64;ReadPosRankSum=6.545;VQSLOD=4.6336;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,33:34:99:1529,102,0	1/1:0,14:14:36.09:516,36,0	0/0:36,0:36:96.23:0,96,1170	0/0:21,0:21:52:0,52,639	1/1:2,35:37:99:1574,105,0	1/1:0,16:16:42.14:630,42,0	1/1:2,18:20:48.16:719,48,0	1/1:0,32:32:96.31:1416,96,0	1/1:0,20:20:54.18:809,54,0	1/1:0,33:33:99:1458,99,0	1/1:0,21:21:60.20:897,60,0	1/1:0,15:15:39.13:584,39,0	1/1:2,34:36:93.31:1392,93,0	1/1:0,32:32:93.32:1393,93,0	1/1:2,27:29:69.23:1034,69,0	1/1:0,20:20:57.19:854,57,0	1/1:1,23:24:63.21:944,63,0	1/1:0,22:22:57.19:854,57,0	0/0:20,0:20:60.18:0,60,766	0/0:29,0:29:84.24:0,84,1061	0/0:16,0:16:48.14:0,48,609	1/1:0,24:24:66.22:989,66,0	1/1:1,25:26:60.10:899,60,0	1/1:1,17:18:42.14:630,42,0	1/1:1,21:22:60.20:899,60,0	1/1:1,23:24:69.22:1013,69,0	1/1:0,26:26:72.24:1079,72,0	1/1:0,8:8:24.08:359,24,0
chr10	9816365	.	ACT	A	2370.29	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.535;DP=657;FS=2.355;HRun=0;HaplotypeScore=76.5582;InbreedingCoeff=0.9983;MQ=79.13;MQ0=0;MQRankSum=-1.624;QD=38.23;ReadPosRankSum=0.188;VQSLOD=5.0027;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:93.32:0,93,1729	0/0:13,0:13:39.13:0,39,725	0/0:23,0:23:66.17:0,66,1168	0/0:21,0:21:54.18:0,54,987	0/0:25,0:25:75.24:0,75,1372	0/0:23,0:23:66.21:0,66,1203	0/0:25,0:25:72.23:0,72,1316	0/0:23,0:23:69.24:0,69,1275	0/0:20,0:20:60.21:0,60,1124	0/0:22,0:22:66.23:0,66,1236	0/0:16,0:16:48.16:0,48,899	0/0:24,0:24:72.25:0,72,1348	0/0:28,0:28:78.27:0,78,1451	0/0:25,0:25:75.26:0,75,1398	0/0:23,0:23:69.24:0,69,1292	0/0:30,0:30:90.31:0,90,1678	0/0:22,0:22:66.23:0,66,1235	0/0:18,0:17:54.19:0,54,1011	1/1:3,10:13:30.10:437,30,0	1/1:0,17:17:51.17:751,51,0	1/1:0,32:32:90.30:1326,90,0	0/0:30,0:30:87.28:0,87,1598	0/0:18,0:18:54.19:0,54,1004	0/0:39,0:39:99:0,114,2088	0/0:29,0:29:87.30:0,87,1630	0/0:26,0:26:78.27:0,78,1461	0/0:31,0:31:93.32:0,93,1708	0/0:7,0:7:21.07:0,21,393
chr10	9817048	.	GAGAGAGAGAGAGAGAGAGACAGAGAC	G	5085.31	PASS	AB=1.000;AC=30;AF=0.556;AN=54;BaseQRankSum=-0.692;DP=593;FS=13.346;HRun=0;HaplotypeScore=306.0703;InbreedingCoeff=0.1660;MQ=43.81;MQ0=29;MQRankSum=1.229;QD=13.60;ReadPosRankSum=1.280;VQSLOD=1.7390;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:37:10.41:0,10,287	1/1:8,0:8:11.23:126,11,0	0/0:21,0:5:8.61:0,9,87	0/0:37,0:3:1.97:0,2,30	0/1:34,0:33:37.20:37,0,221	0/1:21,0:19:54.80:55,0,199	0/1:29,0:28:31.45:96,0,31	1/1:20,0:18:26.43:320,26,0	0/1:19,0:18:89.23:208,0,89	1/1:18,0:16:18.73:674,19,0	0/0:5,26:31:6.34:0,6,35	1/1:8,0:8:11.76:178,12,0	1/1:10,0:10:24.04:494,24,0	1/1:9,0:8:14.70:238,15,0	1/1:14,0:14:24:471,24,0	1/1:12,0:12:27.03:600,27,0	0/1:17,0:17:66.25:450,0,66	1/1:13,0:12:7.83:582,8,0	0/0:24,0:19:48.10:0,48,1079	0/0:31,0:31:23.77:0,24,563	0/1:25,0:22:95.35:95,0,119	0/0:17,0:15:6:0,6,54	./.	1/1:32,0:32:3.85:417,4,0	0/1:18,0:17:10.75:11,0,177	0/1:28,0:26:19.89:20,0,495	0/1:31,0:28:6.11:6,0,170	0/1:7,0:7:6.19:6,0,151
chr10	9817056	.	G	GAC	1915.13	PASS	AB=0.958;AC=14;AF=0.259;AN=54;BaseQRankSum=-2.497;DP=587;FS=5.096;HRun=0;HaplotypeScore=182.4715;InbreedingCoeff=0.3143;MQ=40.61;MQ0=32;MQRankSum=4.254;QD=7.98;ReadPosRankSum=2.970;VQSLOD=3.3344;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:24,15:34:18.58:439,19,0	0/0:9,0:9:7.44:0,7,40	0/0:13,0:2:4.23:0,4,26	./.	1/1:24,5:28:22.03:536,22,0	0/0:21,0:19:19.81:0,20,115	0/0:27,0:26:29.97:0,30,142	0/0:20,0:18:42.35:0,42,274	0/0:17,0:16:25.52:0,26,138	0/1:21,0:18:17.52:18,0,153	0/0:30,0:30:0.47:0,0,1	0/0:12,0:10:14.86:0,15,110	0/0:14,0:12:3.69:0,4,44	0/1:15,0:13:12.33:12,0,83	0/0:16,0:16:2.90:0,3,85	0/0:16,0:16:3.03:0,3,58	0/0:21,0:21:18.14:0,18,161	0/0:17,0:15:18.44:0,18,119	0/0:28,0:21:55.58:0,56,381	0/0:34,0:33:19.21:0,19,144	0/1:23,0:19:2.88:3,0,34	0/0:19,0:17:11.98:0,12,99	0/0:13,0:13:0:0,0,0	0/1:36,0:35:10.85:11,0,28	1/1:13,4:16:11.06:222,11,0	0/1:21,3:23:99:313,0,185	0/1:25,5:25:16.51:419,0,17	1/1:5,1:6:7.74:102,8,0
chr10	9817066	.	GAC	G	1364.05	PASS	AB=0.973;AC=34;AF=0.654;AN=52;BaseQRankSum=-3.742;DP=532;FS=1.186;HRun=0;HaplotypeScore=179.5103;InbreedingCoeff=0.3296;MQ=40.08;MQ0=32;MQRankSum=1.211;QD=3.26;ReadPosRankSum=-3.198;VQSLOD=2.4817;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:35,1:30:32.05:46,0,32	0/0:0,6:6:0:0,0,0	./.	./.	0/1:19,1:19:7.22:7,0,57	0/0:19,0:17:23.78:0,24,178	0/0:22,0:21:14.77:0,15,139	1/1:17,0:15:17.65:108,18,0	0/0:19,0:18:29.85:0,30,252	0/1:20,1:18:34.11:124,0,34	1/1:29,0:29:2.82:24,3,0	1/1:16,1:15:13.76:169,14,0	1/1:14,0:12:6.42:42,6,0	1/1:14,0:13:12.09:147,12,0	1/1:17,0:16:18.29:139,18,0	1/1:16,0:16:9.33:67,9,0	0/1:16,0:17:7.60:110,0,8	1/1:17,0:14:19.92:126,20,0	0/0:26,0:19:24.44:0,24,207	1/1:36,0:33:4.37:57,4,0	1/1:25,0:20:8.80:54,9,0	1/1:20,0:18:11.99:100,12,0	1/1:15,0:15:2.99:24,3,0	1/1:33,0:32:14.06:69,14,0	0/0:15,0:14:8.25:0,8,76	0/1:22,1:22:34.73:35,0,151	0/1:27,0:22:47.79:48,0,85	1/1:4,1:5:5.01:39,5,0
chr10	9817074	.	CAGAG	C	1035.59	PASS	AB=0.898;AC=14;AF=0.269;AN=52;BaseQRankSum=6.860;DP=536;FS=17.320;HRun=0;HaplotypeScore=200.2084;InbreedingCoeff=-0.2340;MQ=39.23;MQ0=28;MQRankSum=-1.809;QD=3.92;ReadPosRankSum=2.372;VQSLOD=1.5386;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:29:20.07:0,20,212	0/0:7,0:7:2.67:0,3,43	./.	./.	0/0:16,0:15:5.73:0,6,44	0/1:15,6:19:18.29:18,0,539	1/1:9,10:19:5.44:106,5,0	0/0:23,0:21:48.76:0,49,424	0/1:12,4:15:99:196,0,337	0/1:18,2:17:68.38:146,0,68	0/0:29,1:30:2.83:0,3,18	0/1:16,1:15:15.49:15,0,106	0/1:14,3:15:99:130,0,141	0/0:13,1:13:22.44:0,22,180	0/1:14,4:17:94.08:94,0,110	0/1:14,4:18:99:122,0,119	0/1:16,1:17:95.49:95,0,133	0/1:16,1:14:99:166,0,138	0/0:21,1:16:9.43:0,9,556	0/0:39,1:37:13.33:0,13,117	0/1:25,0:20:1.11:1,0,17	0/0:17,2:17:14.78:0,15,115	0/0:19,0:19:5.90:0,6,62	0/1:31,1:31:46.34:85,0,46	0/0:17,0:16:12.54:0,13,152	0/0:26,0:25:57.66:0,58,523	0/1:27,0:21:1.17:1,0,221	0/0:3,0:3:4.82:0,5,37
chr10	9817078	.	G	GAC	565.60	PASS	AB=0.983;AC=17;AF=0.327;AN=52;BaseQRankSum=5.281;DP=548;FS=11.883;HRun=0;HaplotypeScore=202.5388;InbreedingCoeff=-0.2419;MQ=39.01;MQ0=28;MQRankSum=-1.889;QD=1.75;ReadPosRankSum=3.868;VQSLOD=1.2035;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:33,2:28:11.94:18,0,12	0/0:7,0:7:3.01:0,3,43	./.	./.	1/1:13,2:14:3.84:104,4,0	0/0:22,0:20:20.50:0,20,433	1/1:19,0:20:5.49:39,5,0	0/1:23,0:21:10.29:10,0,221	0/1:17,0:16:13.63:14,0,233	0/1:20,0:17:23.27:23,0,199	0/0:30,0:30:3.48:0,3,44	0/0:18,0:16:26.10:0,26,324	0/1:16,0:14:18.18:18,0,189	0/0:16,0:15:32.73:0,33,388	0/0:20,0:19:7.74:0,8,323	0/1:17,0:17:21.67:22,0,151	0/1:13,1:16:48.92:49,0,158	0/1:17,0:14:32.93:33,0,173	0/0:26,0:20:10.96:0,11,421	0/0:39,1:37:8.32:0,8,50	0/1:20,1:20:12.64:15,0,13	0/0:20,0:18:21.04:0,21,264	0/0:21,0:21:9.01:0,9,110	0/1:33,0:32:30.73:31,0,77	0/1:16,0:15:28.61:29,0,33	0/1:28,0:26:99:159,0,337	0/1:24,2:20:85.77:152,0,86	0/0:3,0:3:2.29:0,2,7
chr10	9817080	.	CAGAG	C	529.64	PASS	AB=0.981;AC=16;AF=0.308;AN=52;BaseQRankSum=6.788;DP=552;FS=14.407;HRun=0;HaplotypeScore=210.8240;InbreedingCoeff=-0.1914;MQ=39.16;MQ0=29;MQRankSum=-3.092;QD=1.73;ReadPosRankSum=2.005;VQSLOD=1.7726;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:29,2:24:18.76:19,0,32	0/0:8,0:8:5.66:0,6,66	./.	./.	1/1:14,1:13:9.03:117,9,0	0/0:22,0:20:20.67:0,21,571	1/1:21,0:21:4.99:37,5,0	0/1:26,0:24:16.58:17,0,420	0/1:19,0:18:34.32:34,0,392	0/0:20,0:17:4.05:0,4,246	0/0:31,0:31:2.75:0,3,14	0/0:20,0:18:31.54:0,32,220	0/1:16,0:14:8.08:8,0,138	0/0:16,0:15:32.09:0,32,273	0/0:21,0:20:18.74:0,19,284	0/1:15,0:15:18.21:18,0,150	0/1:17,0:17:10.66:11,0,225	0/1:16,0:13:25.85:26,0,150	0/0:28,0:22:3.16:0,3,629	0/0:36,0:33:7.42:0,7,60	0/1:24,0:19:12.15:32,0,12	0/0:19,0:17:23.53:0,24,204	0/0:21,0:21:11.86:0,12,125	0/1:34,0:33:11.86:12,0,101	0/1:15,2:16:43.42:44,0,43	0/1:26,2:26:99:152,0,463	0/1:28,0:22:99:153,0,213	0/0:2,0:2:3:0,3,25
chr10	9817084	.	G	GAC	643.15	PASS	AB=0.990;AC=17;AF=0.327;AN=52;BaseQRankSum=4.463;DP=564;FS=8.074;HRun=0;HaplotypeScore=199.6133;InbreedingCoeff=-0.0806;MQ=39.11;MQ0=29;MQRankSum=-4.992;QD=2.12;ReadPosRankSum=3.192;VQSLOD=1.2923;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:28,1:22:5.48:23,5,0	0/0:9,0:9:6.01:0,6,63	./.	./.	1/1:16,0:14:8.92:96,9,0	0/0:23,0:21:36.41:0,36,445	0/1:20,0:20:6.30:6,0,10	0/1:24,2:24:99:185,0,203	0/0:17,0:16:7.72:0,8,283	0/1:21,1:19:25.74:26,0,198	0/0:29,0:29:3.27:0,3,14	0/0:21,0:19:30.29:0,30,215	0/1:17,0:15:18.95:19,0,157	0/0:17,0:16:31.80:0,32,268	0/0:21,0:20:9:0,9,256	0/1:16,0:16:13.34:13,0,135	0/1:19,0:19:13.82:14,0,250	0/1:16,0:13:48.48:48,0,144	0/1:26,0:21:37.49:37,0,453	0/0:34,0:31:4.62:0,5,23	1/1:22,0:17:5.93:49,6,0	0/0:21,0:19:28.99:0,29,227	0/0:24,0:24:17.81:0,18,162	0/0:35,1:35:10.50:0,11,170	0/1:18,0:17:30.97:35,0,31	0/1:29,0:27:99:153,0,372	0/1:27,0:22:92.23:92,0,158	0/0:2,0:2:2.92:0,3,17
chr10	9817096	.	GAC	G	1419.73	PASS	AB=0.954;AC=26;AF=0.464;AN=56;BaseQRankSum=0.746;DP=565;FS=29.229;HRun=0;HaplotypeScore=183.4594;InbreedingCoeff=-0.2630;MQ=39.93;MQ0=25;MQRankSum=3.406;QD=3.22;ReadPosRankSum=-3.186;VQSLOD=1.0910;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:20,7:21:14.34:14,0,17	0/0:9,0:9:5.62:0,6,18	0/0:5,0:3:9.03:0,9,152	0/0:17,0:6:12.01:0,12,174	1/1:9,3:10:2.03:6,2,0	0/0:23,0:21:5.12:0,5,80	1/1:21,0:20:3.75:82,4,0	0/1:30,0:29:99:180,0,192	0/1:18,0:18:3.80:4,0,69	0/1:19,0:16:26.94:27,0,35	1/1:24,0:24:2.20:8,2,0	0/1:21,0:19:9.46:81,0,9	0/1:18,0:16:9.68:10,0,53	0/1:20,0:19:9.05:99,0,9	0/1:24,0:23:18.28:57,0,18	0/1:18,0:18:17.10:80,0,17	0/1:22,0:22:46.64:47,0,84	0/1:18,0:15:14.23:32,0,14	0/0:21,0:17:35.14:0,35,322	0/0:28,1:26:0.65:0,1,16	0/0:19,0:14:5.47:0,5,26	0/1:17,0:16:13.58:14,0,14	0/1:25,0:25:9.55:10,0,37	0/1:34,0:34:22.83:23,0,29	1/1:6,8:13:3.20:10,3,0	0/1:15,13:26:22.82:559,0,23	0/1:21,7:22:0.77:190,0,1	1/1:1,1:2:3.01:38,3,0
chr10	9817120	.	CAG	C	87.45	PASS	AB=0.846;AC=6;AF=0.107;AN=56;BaseQRankSum=1.902;DP=621;FS=10.763;HRun=0;HaplotypeScore=174.0801;InbreedingCoeff=0.3927;MQ=45.08;MQ0=29;MQRankSum=-4.549;QD=1.39;ReadPosRankSum=-1.931;VQSLOD=1.4305;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:21:19.76:0,20,318	0/0:8,0:8:12.04:0,12,208	0/0:19,0:8:24.08:0,24,378	0/0:40,0:9:3.05:0,3,243	0/0:14,0:14:23.97:0,24,372	0/0:24,0:23:60.19:0,60,972	0/0:23,0:22:32.71:0,33,571	0/0:36,0:36:87.24:0,87,1402	0/0:20,0:20:50.96:0,51,822	0/0:20,0:18:54.18:0,54,929	0/0:11,0:11:18.06:0,18,294	0/0:26,0:24:54.17:0,54,891	0/0:20,0:18:44.75:0,45,740	0/0:25,0:24:59.92:0,60,1024	0/0:28,0:27:72.23:0,72,1201	0/0:20,0:20:45.15:0,45,779	0/0:23,0:23:57.06:0,57,900	0/0:20,0:17:45.11:0,45,746	1/1:10,6:11:7.76:159,8,0	0/1:15,12:24:18.03:18,0,78	1/1:16,1:12:0.47:1,0,0	0/0:19,0:18:51.16:0,51,856	0/0:25,0:25:63.22:0,63,1084	0/0:36,0:36:36.27:0,36,619	0/0:18,0:18:9.92:0,10,205	0/0:28,0:25:14.68:0,15,737	0/0:30,0:24:47.90:0,48,637	0/1:3,0:3:14.65:15,0,95
chr10	9817126	.	GAGAA	G	455.44	PASS	AB=0.922;AC=5;AF=0.089;AN=56;BaseQRankSum=0.205;DP=661;FS=8.878;HRun=0;HaplotypeScore=192.4887;InbreedingCoeff=0.3788;MQ=46.25;MQ0=31;MQRankSum=-0.111;QD=6.24;ReadPosRankSum=-2.404;VQSLOD=1.6923;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:30:36.20:0,36,427	0/0:8,0:8:12.51:0,13,325	0/0:20,0:9:12.08:0,12,455	0/0:43,0:10:23.33:0,23,363	0/0:13,0:13:26.65:0,27,487	0/0:25,0:23:63.94:0,64,1400	0/0:25,0:24:54.23:0,54,1058	0/0:32,0:32:87.13:0,87,1674	0/0:21,0:22:60.03:0,60,1315	0/0:22,0:20:58.08:0,58,1405	0/0:12,0:12:30.52:0,31,604	0/0:28,0:26:61.90:0,62,1417	0/0:21,0:19:51.89:0,52,1181	0/0:25,0:24:61.53:0,62,1537	0/0:30,0:29:78.69:0,79,1902	0/0:20,0:20:50.87:0,51,1189	0/0:25,0:25:44.45:0,44,1380	0/0:22,0:19:48.16:0,48,1154	0/1:19,1:14:82.46:174,0,82	0/1:20,6:23:10.02:200,0,10	1/1:23,0:18:17.17:194,17,0	0/0:20,0:20:57.20:0,57,1449	0/0:26,0:26:66.23:0,66,1692	0/0:37,0:37:50.96:0,51,1050	0/0:20,0:20:19.03:0,19,288	0/0:29,0:26:49.20:0,49,646	0/0:30,0:24:41.82:0,42,617	0/1:4,0:4:4.51:5,0,168
chr10	9817134	.	C	CAG	2766.13	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-1.450;DP=705;FS=1.091;HRun=0;HaplotypeScore=170.1430;InbreedingCoeff=0.9328;MQ=48.61;MQ0=31;MQRankSum=-1.030;QD=20.49;ReadPosRankSum=0.075;VQSLOD=3.6869;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,29:34:31.75:559,32,0	0/0:9,0:9:15.05:0,15,195	0/0:25,0:11:20.83:0,21,219	0/0:46,0:12:17.54:0,18,205	1/1:2,13:15:24:408,24,0	0/0:21,0:20:57.19:0,57,740	0/0:27,0:26:56.17:0,56,739	0/0:36,0:36:56.79:0,57,684	0/0:22,0:22:54.18:0,54,702	0/0:24,0:23:60.18:0,60,755	0/0:12,0:12:30.57:0,31,385	0/0:33,0:31:66.20:0,66,842	0/0:25,0:23:56.96:0,57,698	0/0:26,0:25:60.15:0,60,780	0/0:33,0:32:81.73:0,82,1053	0/0:23,0:23:48.15:0,48,623	0/0:24,0:24:60.01:0,60,778	0/0:21,0:19:45.13:0,45,569	0/0:25,0:18:39.12:0,39,480	0/0:26,0:23:22.22:0,22,252	0/0:23,0:18:18.04:0,18,229	0/0:22,0:22:63.18:0,63,802	0/0:28,0:28:69.22:0,69,896	0/0:38,0:38:53.55:0,54,684	1/1:10,13:24:15.90:303,16,0	1/1:7,20:25:0.90:761,1,0	1/1:8,20:22:41.89:713,42,0	1/1:1,4:5:12.04:198,12,0
chr10	9818643	.	ACC	A	1809.16	PASS	AB=0.706;AC=7;AF=0.125;AN=56;BaseQRankSum=-2.600;DP=466;FS=5.346;HRun=10;HaplotypeScore=72.6158;InbreedingCoeff=0.6627;MQ=81.36;MQ0=1;MQRankSum=-2.138;QD=19.45;ReadPosRankSum=0.616;VQSLOD=2.6847;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:34:72.85:0,73,956	0/0:1,0:2:3:0,3,29	0/0:16,0:16:25.38:0,25,247	0/0:20,0:21:35.85:0,36,511	0/0:11,0:13:35.09:0,35,488	1/1:2,17:19:39.09:435,39,0	1/1:6,26:32:69.16:768,69,0	0/0:11,0:16:26.85:0,27,294	1/1:5,25:29:66.16:736,66,0	0/0:8,0:11:18.05:0,18,228	0/0:2,0:10:6.48:0,6,56	0/0:11,0:12:9.02:0,9,97	0/0:7,0:19:23.83:0,24,281	0/0:7,0:10:8.94:0,9,69	0/0:10,0:12:14.94:0,15,169	0/0:5,0:15:30.06:0,30,343	0/0:6,0:20:30.06:0,30,342	0/0:1,0:8:12.02:0,12,133	0/1:7,1:12:17.16:17,0,47	0/0:4,0:20:42.42:0,42,146	0/0:7,0:37:60.90:0,61,260	0/0:14,0:15:27.50:0,28,304	0/0:7,0:13:5.59:0,6,57	0/0:5,0:13:2.84:0,3,29	0/0:15,0:17:32.57:0,33,438	0/0:11,0:12:25.63:0,26,364	0/0:16,0:16:50.11:0,50,685	0/0:7,0:8:20.46:0,20,194
chr10	9818785	.	C	CA	11908.83	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=8.995;DP=578;FS=5.124;HRun=0;HaplotypeScore=216.5106;InbreedingCoeff=0.9792;MQ=86.17;MQ0=0;MQRankSum=-11.989;QD=23.12;ReadPosRankSum=5.724;VQSLOD=4.5250;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,27:30:74.87:669,75,0	1/1:3,7:10:29.98:261,30,0	0/0:37,0:38:99:0,100,1345	0/0:25,0:23:42.16:0,42,749	1/1:1,33:34:78.71:562,79,0	1/1:1,26:25:65.94:574,66,0	1/1:5,17:22:62.72:557,63,0	1/1:0,23:23:69.04:702,69,0	1/1:0,29:28:75.01:670,75,0	1/1:3,27:30:87.19:923,87,0	1/1:2,13:15:38.41:308,38,0	1/1:3,17:20:56.89:501,57,0	1/1:2,21:23:65.64:551,66,0	1/1:2,14:16:47.93:430,48,0	1/1:0,22:22:62.81:527,63,0	1/1:2,14:16:47.96:426,48,0	1/1:3,13:16:41.89:350,42,0	1/1:4,9:13:29.98:306,30,0	1/1:0,8:8:22.23:224,22,0	1/1:0,22:22:52.64:430,53,0	1/1:6,22:28:62.35:492,62,0	1/1:2,14:16:43.06:364,43,0	1/1:2,10:12:32.99:302,33,0	1/1:2,15:18:14.30:111,14,0	1/1:3,18:21:54.44:496,54,0	1/1:2,17:19:56.78:529,57,0	1/1:2,18:20:57.88:520,58,0	1/1:0,4:5:14.51:126,15,0
chr10	9818786	.	CTGAGGG	C	21286.79	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=5.404;DP=568;FS=9.186;HRun=0;HaplotypeScore=230.9253;InbreedingCoeff=0.9829;MQ=87.23;MQ0=0;MQRankSum=-11.859;QD=42.24;ReadPosRankSum=7.093;VQSLOD=3.3325;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,24:30:69.60:1175,70,0	1/1:0,7:7:21.07:369,21,0	0/0:39,0:39:99:0,101,2856	0/0:25,0:23:66.13:0,66,1919	1/1:4,31:35:93.23:1322,93,0	1/1:4,22:24:62.02:1056,62,0	1/1:4,16:20:51.17:862,51,0	1/1:3,19:22:62.74:1095,63,0	1/1:3,26:28:75.26:1319,75,0	1/1:3,27:30:84.28:1537,84,0	1/1:2,13:15:39.11:565,39,0	1/1:2,17:20:57.18:969,57,0	1/1:5,18:23:64.94:1025,65,0	1/1:3,13:16:44.18:745,44,0	1/1:1,21:22:62.43:1034,62,0	1/1:1,14:15:45.15:757,45,0	1/1:4,12:16:39.74:598,40,0	1/1:5,8:13:28.86:480,29,0	1/1:3,5:8:20.78:288,21,0	1/1:2,19:21:57.17:918,57,0	1/1:8,19:27:56.69:877,57,0	1/1:3,13:16:42.14:689,42,0	1/1:2,10:12:30.09:485,30,0	1/1:3,14:17:18.06:273,18,0	1/1:3,17:20:51.14:826,51,0	1/1:6,13:19:52.87:789,53,0	1/1:3,17:20:50.49:957,50,0	1/1:0,5:5:15.05:275,15,0
chr10	9818787	.	TG	T	3092.47	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=10.376;DP=559;FS=10.553;HRun=1;HaplotypeScore=244.7928;InbreedingCoeff=0.9403;MQ=86.54;MQ0=0;MQRankSum=-12.247;QD=6.23;ReadPosRankSum=7.955;VQSLOD=-0.6049;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:27,3:30:52.81:178,53,0	1/1:7,0:7:15.54:49,16,0	0/0:38,0:38:99:0,102,1529	0/0:25,0:23:66.12:0,66,954	1/1:33,2:35:46.76:158,47,0	1/1:22,4:24:46.22:144,46,0	1/1:16,2:18:32.65:102,33,0	1/1:19,2:21:47.73:161,48,0	1/1:26,3:28:55.78:176,56,0	1/1:30,0:30:64.77:256,65,0	1/1:15,0:15:21.82:85,22,0	1/1:20,0:20:42.77:164,43,0	1/1:20,2:23:50.52:190,51,0	1/1:14,1:15:33.90:121,34,0	1/1:21,1:22:44.88:140,45,0	1/1:15,0:15:34.08:124,34,0	1/1:15,1:16:31.05:97,31,0	1/1:11,1:12:23.32:101,23,0	1/1:6,1:7:13.92:64,14,0	1/1:19,2:21:35.36:112,35,0	1/1:23,3:26:33.56:103,34,0	1/1:14,1:15:26.07:96,26,0	1/1:11,0:11:22.98:87,23,0	1/1:17,1:17:11.01:33,11,0	1/1:18,1:19:34.54:128,35,0	1/1:16,4:20:42.75:160,43,0	1/1:19,1:20:37.04:160,37,0	1/1:5,0:5:11.10:35,11,0
chr10	9818791	.	G	GCA	3803.84	PASS	AB=0.980;AC=44;AF=0.786;AN=56;BaseQRankSum=9.426;DP=571;FS=2.508;HRun=0;HaplotypeScore=252.3132;InbreedingCoeff=0.1705;MQ=84.38;MQ0=0;MQRankSum=-11.423;QD=7.47;ReadPosRankSum=10.343;VQSLOD=2.0736;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:31,4:36:7.67:148,8,0	1/1:7,0:7:15.16:52,15,0	0/0:33,0:33:88.71:0,89,1378	0/0:29,0:27:75.12:0,75,1093	1/1:36,0:36:29.25:571,29,0	1/1:26,0:24:27.31:133,27,0	1/1:19,0:19:36.74:236,37,0	0/1:23,0:23:33.25:126,0,33	1/1:29,0:28:50.05:155,50,0	1/1:31,0:31:33.06:262,33,0	0/1:14,1:16:19.01:223,0,19	1/1:19,0:19:26.34:84,26,0	0/1:23,0:23:21.35:56,0,21	1/1:16,0:16:27.91:121,28,0	1/1:23,0:23:21.78:145,22,0	1/1:15,0:15:28.89:85,29,0	1/1:14,0:14:22.30:65,22,0	1/1:12,0:12:15.56:52,16,0	0/1:8,0:8:54.17:61,0,54	1/1:23,0:23:42.70:300,43,0	1/1:25,0:25:12.27:300,12,0	1/1:15,0:15:28.57:226,29,0	0/1:11,0:11:0.76:28,0,1	0/1:19,0:18:7.96:8,0,16	1/1:19,0:19:32.50:187,32,0	0/1:18,1:19:96.25:96,0,176	0/1:20,0:20:7.40:63,0,7	1/1:5,0:5:1.33:19,1,0
chr10	9819138	.	C	CAG	6271.05	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-13.606;DP=810;FS=10.927;HRun=0;HaplotypeScore=100.3564;InbreedingCoeff=0.9948;MQ=70.55;MQ0=1;MQRankSum=-0.789;QD=32.66;ReadPosRankSum=1.017;VQSLOD=6.6122;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:55:99:0,147,1779	0/0:9,0:9:24.06:0,24,290	0/0:36,0:35:64.93:0,65,763	0/0:18,0:17:17.17:0,17,219	0/0:22,0:22:48.13:0,48,579	1/1:1,32:33:87.30:1446,87,0	1/1:6,19:25:51.17:847,51,0	0/0:26,0:26:47.45:0,47,693	1/1:11,25:37:22.34:910,22,0	0/0:27,0:27:66.17:0,66,806	0/0:24,0:24:63.19:0,63,782	0/0:25,0:25:66.14:0,66,789	0/0:29,0:29:78.25:0,78,984	0/0:30,0:30:66.20:0,66,819	0/0:32,0:32:87.26:0,87,1083	0/0:37,0:37:96.13:0,96,1175	0/0:24,0:24:54.16:0,54,667	0/0:20,0:20:54.13:0,54,652	1/1:4,17:23:57.13:844,57,0	1/1:11,20:31:19.32:803,19,0	1/1:7,36:43:20.33:1420,20,0	0/0:26,0:27:59.98:0,60,698	0/0:25,0:25:66.20:0,66,815	0/0:28,0:28:74.39:0,74,884	0/0:35,0:35:69.56:0,70,972	0/0:34,0:34:72.21:0,72,885	0/0:38,0:38:80.51:0,81,1122	0/0:15,0:15:39.12:0,39,492
chr10	9819763	.	CACACACACAT	C	1079.27	PASS	AB=1.000;AC=31;AF=0.620;AN=50;BaseQRankSum=2.679;DP=395;FS=10.171;HRun=0;HaplotypeScore=100.2065;InbreedingCoeff=0.3508;MQ=43.68;MQ0=23;MQRankSum=-2.351;QD=3.79;ReadPosRankSum=2.440;VQSLOD=1.3177;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:33:5.83:0,6,84	./.	0/0:19,0:9:27.03:0,27,265	0/0:18,0:13:35.99:0,36,355	0/1:14,0:14:0.03:0,0,0	0/0:5,0:5:0:0,0,0	0/0:3,0:3:2.68:0,3,11	1/1:14,0:8:7:123,7,0	1/1:7,0:7:0.95:3,1,0	1/1:14,0:12:5.52:45,6,0	0/1:11,0:10:0:0,0,0	1/1:20,0:18:5.50:87,6,0	1/1:15,1:16:2.25:83,2,0	1/1:19,0:18:3.01:45,3,0	1/1:13,0:13:3.47:26,3,0	1/1:12,2:14:14.62:328,15,0	1/1:29,0:29:35.83:251,36,0	1/1:20,0:18:5.76:37,6,0	0/1:9,0:5:2.06:37,0,2	./.	0/0:7,0:3:0:0,0,0	./.	1/1:14,0:14:2.75:20,3,0	0/1:32,0:31:2.08:40,0,2	1/1:17,0:16:2.79:46,3,0	0/1:19,0:15:26.16:26,0,50	0/0:7,0:7:3.41:0,3,32	1/1:3,0:2:2.90:16,3,0
chr10	9819765	.	CACACACAT	C	1237.86	PASS	AB=1.000;AC=34;AF=0.708;AN=48;BaseQRankSum=2.744;DP=375;FS=9.943;HRun=0;HaplotypeScore=89.4860;InbreedingCoeff=0.3650;MQ=44.57;MQ0=24;MQRankSum=-3.578;QD=4.52;ReadPosRankSum=3.217;VQSLOD=0.9394;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:2.73:0,3,67	./.	0/0:20,0:10:23.20:0,23,259	0/0:21,0:15:42.01:0,42,423	0/1:13,0:13:0.10:0,0,0	0/1:5,0:5:0:0,0,0	0/0:3,0:3:0.89:0,1,2	1/1:15,0:9:11.74:144,12,0	0/1:7,0:7:0.19:0,0,0	1/1:11,0:9:5.98:46,6,0	./.	1/1:19,0:17:5.63:68,6,0	1/1:5,7:12:2.77:52,3,0	1/1:4,12:15:3.01:81,3,0	1/1:13,0:13:3:25,3,0	1/1:4,8:12:15.05:369,15,0	1/1:29,0:29:40.42:317,40,0	1/1:19,1:18:7.59:41,8,0	0/1:9,0:5:2.06:37,0,2	./.	0/1:7,0:3:0:0,0,0	./.	1/1:3,11:14:0.26:1,0,0	1/1:26,2:27:5.44:108,5,0	1/1:17,0:16:2.71:26,3,0	0/1:18,0:14:28.11:28,0,40	1/1:6,0:6:0.05:1,0,0	1/1:3,0:2:2.90:16,3,0
chr10	9819771	.	CAT	C	969.93	PASS	AB=0.885;AC=38;AF=0.792;AN=48;BaseQRankSum=3.943;DP=333;FS=5.482;HRun=0;HaplotypeScore=74.0098;InbreedingCoeff=0.4117;MQ=55.21;MQ0=22;MQRankSum=-4.862;QD=4.09;ReadPosRankSum=4.728;VQSLOD=1.1511;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,1:23:2.97:0,3,13	./.	0/0:28,0:18:19.02:0,19,427	0/0:24,0:18:47.99:0,48,479	0/1:10,0:10:0.05:0,0,0	1/1:5,0:5:0.89:2,1,0	1/1:0,3:3:3.01:36,3,0	1/1:16,0:12:18.36:169,18,0	0/1:1,6:7:0:0,0,0	1/1:1,8:9:6.45:47,6,0	./.	1/1:13,0:11:5.75:49,6,0	1/1:9,0:9:2.85:19,3,0	1/1:13,0:12:2.98:22,3,0	1/1:12,0:12:5.73:48,6,0	1/1:10,0:10:14.89:111,15,0	1/1:24,0:24:43.35:304,43,0	1/1:16,0:14:13.54:69,14,0	0/1:9,0:5:2.44:37,0,2	./.	1/1:8,0:4:0.47:1,0,0	./.	0/1:12,0:12:0:0,0,0	1/1:28,0:27:2.45:34,2,0	1/1:14,0:13:2.99:24,3,0	1/1:11,0:8:5.05:84,5,0	1/1:5,1:6:2.76:20,3,0	1/1:2,0:1:2.90:16,3,0
chr10	9819780	.	A	ACGCGCG	4800.39	PASS	AB=1.000;AC=46;AF=0.885;AN=52;BaseQRankSum=2.099;DP=443;FS=5.606;HRun=0;HaplotypeScore=117.3013;InbreedingCoeff=0.4535;MQ=63.68;MQ0=12;MQRankSum=-6.618;QD=13.01;ReadPosRankSum=0.086;VQSLOD=3.6449;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:28:7.70:40,8,0	1/1:1,0:1:3.01:30,3,0	0/0:30,0:21:62.22:0,62,1257	0/0:30,0:24:60.17:0,60,1271	1/1:17,0:17:5.27:69,5,0	./.	1/1:13,0:13:15.05:274,15,0	1/1:20,0:16:44.99:698,45,0	1/1:13,0:13:1.24:20,1,0	1/1:11,0:9:11.78:229,12,0	./.	1/1:13,0:12:6.02:100,6,0	0/1:10,0:10:0:0,0,0	0/1:16,0:15:3.77:34,0,4	1/1:15,0:15:11.90:237,12,0	1/1:13,0:13:12.67:129,13,0	1/1:25,1:26:54.17:1011,54,0	1/1:7,12:17:12.04:200,12,0	1/1:9,0:6:9.03:204,9,0	1/1:7,0:6:3.01:40,3,0	1/1:15,0:14:5.98:59,6,0	1/1:14,0:13:9.03:138,9,0	1/1:15,0:15:9.03:159,9,0	1/1:10,23:33:3.50:16,3,0	1/1:22,0:22:11.97:157,12,0	1/1:19,0:18:26.67:412,27,0	1/1:14,0:14:18.27:268,18,0	1/1:5,0:5:12.04:277,12,0
chr10	9819784	.	G	GCA	43.34	PASS	AB=1.000;AC=13;AF=0.260;AN=50;BaseQRankSum=5.485;DP=467;FS=0.860;HRun=0;HaplotypeScore=104.0350;InbreedingCoeff=-0.0126;MQ=70.91;MQ0=6;MQRankSum=-4.548;QD=0.22;ReadPosRankSum=3.090;VQSLOD=1.8293;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:30:4.54:5,0,35	./.	0/0:34,0:24:36.86:0,37,735	0/0:34,0:28:71.73:0,72,816	0/0:18,0:18:2.47:0,2,35	./.	1/1:13,0:13:3.01:45,3,0	0/1:18,0:17:9.18:9,0,45	1/1:13,0:13:2.78:48,3,0	0/1:12,0:11:1.85:2,0,24	0/0:9,0:8:2.98:0,3,21	0/1:14,0:13:14.60:15,0,24	0/0:11,0:11:5.88:0,6,49	0/0:17,0:17:3.85:0,4,22	0/0:16,0:16:1.62:0,2,5	0/0:13,0:13:16.17:0,16,86	0/1:29,0:29:11.88:12,0,20	0/1:17,0:17:5.12:17,0,5	0/1:10,0:7:2.66:3,0,52	0/0:9,0:8:2.74:0,3,12	0/1:15,0:14:0:0,0,0	0/0:15,0:14:5.95:0,6,42	./.	0/0:34,0:34:2.20:0,2,29	0/1:25,0:25:7.83:8,0,37	0/0:19,0:18:15.30:0,15,124	0/0:14,0:14:1.08:0,1,20	0/0:5,0:5:5.39:0,5,40
chr10	9821759	.	AACACACAC	A	9525.49	PASS	AB=0.742;AC=27;AF=0.482;AN=56;BaseQRankSum=3.633;DP=659;FS=3.267;HRun=0;HaplotypeScore=219.2989;InbreedingCoeff=0.8868;MQ=66.38;MQ0=4;MQRankSum=-11.746;QD=30.83;ReadPosRankSum=3.526;VQSLOD=4.4081;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:52:78.25:0,78,2648	1/1:0,11:11:33.11:838,33,0	0/0:31,0:21:9.01:0,9,186	0/0:23,0:19:3.01:0,3,120	0/0:8,0:11:18.06:0,18,662	0/0:7,0:18:21.04:0,21,419	0/0:14,0:22:21.04:0,21,373	1/1:30,7:38:20.89:243,21,0	0/0:14,0:23:33.10:0,33,760	1/1:21,5:27:25.54:557,26,0	1/1:6,5:11:12.04:305,12,0	1/1:12,12:24:39.13:991,39,0	1/1:13,10:24:33.11:818,33,0	1/1:11,8:20:24.08:589,24,0	1/1:12,14:26:42.14:1067,42,0	1/1:10,10:20:33.10:778,33,0	1/1:10,12:23:36.12:894,36,0	1/1:10,4:16:24.04:481,24,0	0/0:17,0:19:18.06:0,18,662	0/0:7,0:18:24.08:0,24,832	0/0:26,0:44:75.21:0,75,2534	1/1:14,11:26:33.22:837,33,0	1/1:10,8:20:30.10:686,30,0	0/1:15,8:23:23.90:443,0,24	0/0:25,0:35:32.62:0,33,1137	0/0:9,0:20:44.36:0,44,1486	0/0:15,0:19:24.08:0,24,902	0/0:6,0:13:21.04:0,21,651
chr10	9821840	.	CCACA	C	16895.41	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=13.824;DP=720;FS=0.285;HRun=0;HaplotypeScore=149.9462;InbreedingCoeff=0.9998;MQ=65.31;MQ0=1;MQRankSum=-3.739;QD=46.67;ReadPosRankSum=4.233;VQSLOD=5.2473;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,126,3304	1/1:3,13:16:39.09:703,39,0	0/0:31,0:28:75.16:0,75,1802	0/0:36,0:36:89.27:0,89,2230	0/0:22,0:22:57.20:0,57,1464	0/0:28,0:28:78.27:0,78,2087	0/0:20,0:20:57.18:0,57,1423	1/1:5,25:30:72.23:1304,72,0	0/0:25,0:25:66.23:0,66,1735	1/1:3,21:24:69.24:1310,69,0	1/1:1,21:22:54.14:987,54,0	1/1:2,23:25:66.18:1215,66,0	1/1:2,25:27:69.24:1292,69,0	1/1:3,28:31:81.28:1537,81,0	1/1:3,24:27:69.24:1310,69,0	1/1:3,32:35:87.30:1651,87,0	1/1:1,19:20:51.17:951,51,0	1/1:2,21:23:54.14:988,54,0	0/0:27,0:27:72.24:0,72,1846	0/0:19,0:19:57.20:0,57,1506	0/0:24,0:24:69.24:0,69,1835	1/1:4,26:30:63.17:1159,63,0	1/1:2,14:16:45.15:837,45,0	1/1:2,34:36:86.92:1651,87,0	0/0:23,0:23:62.90:0,63,1635	0/0:28,0:28:78.27:0,78,2080	0/0:22,0:22:66.23:0,66,1763	0/0:10,0:10:27.09:0,27,728
chr10	9821843	.	CACA	C	6916.69	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=18.904;DP=686;FS=0.283;HRun=0;HaplotypeScore=160.7588;InbreedingCoeff=0.9998;MQ=65.00;MQ0=1;MQRankSum=-4.456;QD=20.71;ReadPosRankSum=4.683;VQSLOD=4.8100;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,129,3047	1/1:13,1:14:38.83:296,39,0	0/0:30,0:27:81.23:0,81,1758	0/0:35,0:35:78.45:0,78,2150	0/0:20,0:20:57.20:0,57,1324	0/0:28,0:28:81.28:0,81,1924	0/0:22,0:22:63.20:0,63,1380	1/1:25,0:25:71.49:561,71,0	0/0:23,0:23:66.23:0,66,1583	1/1:21,1:23:68.74:529,69,0	1/1:21,1:22:43.59:380,44,0	1/1:23,0:23:65.73:501,66,0	1/1:25,0:25:39.52:512,40,0	1/1:28,1:29:80.69:619,81,0	1/1:24,1:25:68.74:529,69,0	1/1:32,0:32:86.67:665,87,0	1/1:19,0:19:50.83:407,51,0	1/1:21,0:21:53.77:410,54,0	0/0:26,0:26:78.26:0,78,1786	0/0:20,0:20:60.21:0,60,1394	0/0:24,0:24:69.24:0,69,1650	1/1:26,0:26:62.74:479,63,0	1/1:14,1:15:44.85:362,45,0	1/1:34,1:35:86.04:668,86,0	0/0:23,0:23:62.83:0,63,1480	0/0:26,0:26:78.27:0,78,1873	0/0:22,0:22:66.23:0,66,1585	0/0:9,0:9:27.09:0,27,656
chr10	9822706	.	CAGCAAAGAACCA	C	7503.37	PASS	AB=0.985;AC=16;AF=0.286;AN=56;BaseQRankSum=4.890;DP=720;FS=0.352;HRun=0;HaplotypeScore=280.9631;InbreedingCoeff=0.6116;MQ=85.76;MQ0=0;MQRankSum=-10.847;QD=34.58;ReadPosRankSum=-7.830;VQSLOD=1.9915;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,31:31:51.10:1223,51,0	0/1:15,1:16:67.53:68,0,2007	0/0:25,0:25:75.25:0,75,3672	0/0:29,0:29:78.21:0,78,3128	1/1:0,25:25:53.81:971,54,0	0/0:20,0:20:32.20:0,32,2610	0/0:42,0:42:0.39:0,0,4899	0/1:27,0:27:0.39:0,0,2405	0/0:26,0:26:35.27:0,35,3358	0/0:30,0:30:52.28:0,52,3615	0/0:17,0:17:30.18:0,30,2440	0/0:28,0:28:5.28:0,5,3104	0/0:27,0:27:16.27:0,16,3420	0/0:24,0:24:41.25:0,41,3017	0/0:25,0:25:63.12:0,63,2842	0/0:25,0:25:21.23:0,21,2865	0/0:26,0:26:32.29:0,32,3533	0/0:22,0:22:38.06:0,38,2954	0/1:23,0:23:24.80:25,0,2379	0/0:21,0:21:13.23:0,13,2643	0/0:59,0:59:9.57:0,10,6434	0/1:24,0:24:2.78:3,0,2445	0/0:28,0:28:32.07:0,32,3350	0/0:29,0:29:84.25:0,84,3952	1/1:0,19:19:48.16:1753,48,0	1/1:2,20:22:60.03:1839,60,0	1/1:1,25:26:47.75:1510,48,0	1/1:1,3:4:3.01:113,3,0
chr10	9823560	.	AACACACACAC	A	2115.65	PASS	AB=0.868;AC=23;AF=0.426;AN=54;BaseQRankSum=6.184;DP=560;FS=0.714;HRun=0;HaplotypeScore=174.0749;InbreedingCoeff=0.6266;MQ=69.84;MQ0=9;MQRankSum=-4.272;QD=7.86;ReadPosRankSum=1.115;VQSLOD=2.7721;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:26,12:39:12.43:189,12,0	0/0:10,0:13:8.62:0,9,115	./.	0/0:25,0:21:1.25:0,1,3	1/1:16,5:21:6.45:32,6,0	1/1:10,0:9:3.48:71,3,0	0/1:32,0:31:0.04:0,0,1	0/0:29,0:27:3.48:0,3,67	1/1:17,0:17:9.03:145,9,0	0/0:15,0:15:21.96:0,22,599	0/0:16,0:18:27.56:0,28,759	0/0:16,0:16:15.39:0,15,364	1/1:7,0:11:12.04:279,12,0	0/0:9,0:9:18.06:0,18,415	0/1:12,0:21:45.95:46,0,76	0/0:11,0:13:17.65:0,18,398	0/1:17,0:18:15.49:15,0,67	0/0:18,0:24:23.84:0,24,533	1/1:13,0:16:9.03:209,9,0	1/1:13,0:19:12.04:279,12,0	0/0:19,0:19:0:0,0,0	0/0:11,0:17:21.04:0,21,338	0/0:17,0:20:48.16:0,48,1884	0/0:27,0:30:24.08:0,24,1017	1/1:11,9:21:7.41:419,7,0	1/1:9,12:20:23.99:385,24,0	1/1:16,1:22:9.03:228,9,0	0/0:9,0:9:0:0,0,0
chr10	9824028	.	C	CA	28687.29	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-7.935;DP=748;FS=1.402;HRun=1;HaplotypeScore=67.2110;InbreedingCoeff=0.9979;MQ=79.49;MQ0=0;MQRankSum=-9.262;QD=40.18;ReadPosRankSum=4.940;VQSLOD=5.3457;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,66:69:99:2823,190,0	1/1:2,15:17:51.17:750,51,0	0/0:19,0:19:57.18:0,57,717	0/0:15,0:15:42.06:0,42,481	1/1:0,31:31:93.12:1273,93,0	1/1:0,20:20:54.18:809,54,0	1/1:0,24:24:60.20:899,60,0	1/1:2,34:36:99:1455,102,0	1/1:1,31:32:81.27:1214,81,0	1/1:1,24:25:72.20:1033,72,0	1/1:2,19:21:57.11:826,57,0	1/1:1,27:28:69.07:1034,69,0	1/1:1,19:20:57.19:854,57,0	1/1:0,18:18:51.17:764,51,0	1/1:0,25:25:69.23:1032,69,0	1/1:0,27:27:75.25:1124,75,0	1/1:1,25:26:69.23:1034,69,0	1/1:1,27:28:74.17:1122,74,0	1/1:0,23:23:66.20:967,66,0	1/1:0,31:31:90.30:1342,90,0	1/1:2,28:30:72.24:1079,72,0	1/1:3,32:35:93.32:1393,93,0	1/1:0,24:24:69.23:1034,69,0	1/1:0,29:29:78.26:1169,78,0	1/1:0,29:30:69.23:1013,69,0	1/1:3,30:33:93.29:1341,93,0	1/1:0,24:24:66.22:989,66,0	1/1:0,8:8:21.07:315,21,0
chr10	9824482	.	GAGAATAGATGAGAGAGA	G	20859.30	PASS	AB=0.517;AC=27;AF=0.482;AN=56;BaseQRankSum=16.520;DP=658;FS=3.011;HRun=0;HaplotypeScore=291.8769;InbreedingCoeff=0.9037;MQ=75.40;MQ0=0;MQRankSum=-13.990;QD=70.23;ReadPosRankSum=0.704;VQSLOD=4.4035;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:37:90.27:0,90,6788	1/1:0,5:5:6.02:292,6,0	0/0:40,0:37:44.35:0,44,3163	0/0:37,0:33:57.53:0,58,2683	0/0:17,0:17:39.13:0,39,2403	0/0:29,0:29:81.28:0,81,6292	0/0:25,0:25:72.25:0,72,4763	1/1:2,33:35:93.30:2021,93,0	0/0:21,0:21:57.19:0,57,4144	1/1:2,17:19:42.12:1662,42,0	1/1:1,18:19:36.12:1550,36,0	1/1:1,27:28:51.18:2458,51,0	1/1:0,27:27:45.15:2189,45,0	1/1:1,16:17:30.10:1455,30,0	1/1:3,29:32:60.21:2911,60,0	0/1:1,14:15:99:851,0,227	1/1:5,16:21:11.78:584,12,0	1/1:1,15:16:18.06:872,18,0	0/0:19,0:19:54.19:0,54,3757	0/0:18,0:18:48.16:0,48,3826	0/0:28,0:28:75.24:0,75,5323	1/1:2,21:23:48.16:2264,48,0	1/1:2,14:16:29.83:1238,30,0	1/1:3,21:24:11.69:513,12,0	0/0:23,0:23:69.24:0,69,5214	0/0:27,0:27:27.40:0,27,5450	0/0:24,0:24:66.23:0,66,4954	0/0:15,0:15:42.14:0,42,3420
chr10	9827577	.	CTGTGG	C	2526.58	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.309;DP=718;FS=3.774;HRun=0;HaplotypeScore=131.4666;InbreedingCoeff=0.9885;MQ=87.35;MQ0=0;MQRankSum=-4.440;QD=40.10;ReadPosRankSum=3.075;VQSLOD=3.5924;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,114,3538	0/0:9,0:9:27.09:0,27,857	0/0:27,0:27:71.66:0,72,1935	0/0:23,0:23:60.21:0,60,1799	0/0:21,0:21:54.19:0,54,1681	0/0:15,0:15:45.15:0,45,1427	0/0:26,0:26:72.25:0,72,2247	0/0:45,0:45:99:0,135,4089	0/0:32,0:32:96.32:0,96,2975	0/0:28,0:28:81.27:0,81,2351	0/0:19,0:19:57.20:0,57,1756	0/0:28,0:28:84.27:0,84,2501	0/0:37,0:37:99:0,108,3348	0/0:29,0:29:87.30:0,87,2759	0/0:32,0:32:90.27:0,90,2776	0/0:39,0:39:99:0,114,3476	0/0:25,0:25:75.26:0,75,2274	0/0:23,0:23:69.24:0,69,2154	1/1:4,11:15:33.11:716,33,0	1/1:0,19:19:48.16:1041,48,0	1/1:1,28:29:41.82:912,42,0	0/0:26,0:26:78.25:0,78,2399	0/0:10,0:10:30.08:0,30,879	0/0:36,0:36:99:0,105,3259	0/0:21,0:21:60.21:0,60,1886	0/0:25,0:25:72.25:0,72,2241	0/0:33,0:33:93.32:0,93,2922	0/0:5,0:5:12.04:0,12,381
chr10	9828518	.	CTTG	C	2355.80	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=7.763;DP=707;FS=6.228;HRun=0;HaplotypeScore=102.1464;InbreedingCoeff=0.9999;MQ=95.65;MQ0=0;MQRankSum=-2.987;QD=36.24;ReadPosRankSum=1.798;VQSLOD=4.0681;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,102,2246	0/0:14,0:14:36.12:0,36,786	0/0:28,0:28:69.24:0,69,1467	0/0:41,0:41:99:0,111,2235	0/0:25,0:25:69.21:0,69,1446	1/1:1,18:19:42.14:686,42,0	1/1:2,20:22:48.16:784,48,0	0/0:32,0:32:84.29:0,84,1877	1/1:1,23:24:63.22:1029,63,0	0/0:39,0:39:99:0,114,2538	0/0:31,0:31:90.31:0,90,2010	0/0:19,0:19:57.18:0,57,1227	0/0:24,0:24:72.25:0,72,1601	0/0:27,0:27:81.26:0,81,1745	0/0:16,0:16:48.16:0,48,1073	0/0:24,0:24:66.23:0,66,1452	0/0:23,0:23:66.23:0,66,1452	0/0:21,0:21:60.18:0,60,1270	0/0:21,0:21:57.20:0,57,1250	0/0:35,0:35:99:0,102,2238	0/0:27,0:27:72.24:0,72,1540	0/0:26,0:26:78.27:0,78,1741	0/0:20,0:20:57.20:0,57,1268	0/0:23,0:23:63.22:0,63,1360	0/0:24,0:24:69.24:0,69,1542	0/0:25,0:25:72.25:0,72,1609	0/0:26,0:26:78.27:0,78,1742	0/0:16,0:16:48.16:0,48,1072
chr10	9829643	.	T	TA	339.93	PASS	AB=0.826;AC=6;AF=0.107;AN=56;BaseQRankSum=1.170;DP=551;FS=0.766;HRun=0;HaplotypeScore=102.7417;InbreedingCoeff=0.5233;MQ=61.60;MQ0=2;MQRankSum=-0.072;QD=10.30;ReadPosRankSum=-0.636;VQSLOD=3.5588;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:48.07:0,48,626	0/0:8,0:8:24.07:0,24,295	0/1:4,0:4:13.47:13,0,39	0/0:2,0:2:2.98:0,3,22	0/0:25,0:25:72.24:0,72,997	0/1:7,8:15:13.20:198,0,13	1/1:1,5:6:5.54:102,6,0	0/0:24,0:24:32.47:0,32,606	1/1:1,7:8:9.73:147,10,0	0/0:36,0:36:99:0,108,1298	0/0:31,0:31:82.55:0,83,974	0/0:25,0:25:63.19:0,63,769	0/0:24,0:24:66.15:0,66,752	0/0:22,0:21:57.18:0,57,714	0/0:14,0:14:33.10:0,33,413	0/0:27,0:27:75.22:0,75,916	0/0:27,0:27:69.18:0,69,803	0/0:22,0:22:54.07:0,54,594	0/0:17,0:17:51.16:0,51,698	0/0:26,0:26:75.25:0,75,1047	0/0:10,0:10:30.08:0,30,398	0/0:14,0:14:39.11:0,39,496	0/0:25,0:25:66.19:0,66,787	0/0:13,0:13:24.07:0,24,298	0/0:24,0:24:69.19:0,69,942	0/0:33,0:33:99:0,99,1343	0/0:30,0:29:78.21:0,78,1051	0/0:21,0:21:63.20:0,63,864
chr10	9829644	.	TTA	T	8695.73	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=4.292;DP=548;FS=4.212;HRun=0;HaplotypeScore=82.6036;InbreedingCoeff=0.9102;MQ=61.57;MQ0=2;MQRankSum=1.472;QD=27.69;ReadPosRankSum=-0.305;VQSLOD=5.4127;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:42.12:0,42,644	1/1:1,7:8:21.07:265,21,0	0/1:4,0:4:3.99:4,0,20	0/0:2,0:2:3.01:0,3,33	0/0:25,0:25:69.24:0,69,1146	0/0:8,0:16:27:0,27,238	0/0:1,0:6:15:0,15,132	1/1:3,21:24:63.15:743,63,0	0/0:1,0:8:20.94:0,21,177	1/1:5,31:36:96.31:1211,96,0	1/1:1,30:31:87.08:1023,87,0	1/1:3,22:25:54.17:681,54,0	1/1:2,20:23:57.01:695,57,0	1/1:4,18:21:48.11:588,48,0	1/1:2,12:14:27.09:341,27,0	1/1:7,19:26:51.16:643,51,0	1/1:3,24:27:60.16:740,60,0	1/1:4,18:22:45.10:549,45,0	0/0:17,0:17:42.14:0,42,675	0/0:26,0:26:66.20:0,66,1040	0/0:9,0:9:18.06:0,18,289	1/1:6,8:14:21.02:247,21,0	1/1:2,23:25:60.15:739,60,0	1/1:2,11:13:18.06:227,18,0	0/0:25,0:25:63.20:0,63,1005	0/0:29,2:31:8.57:0,9,1196	0/0:30,0:29:63.13:0,63,979	0/0:20,0:21:57.19:0,57,923
chr10	9829707	.	TAC	T	5397.06	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=6.096;DP=689;FS=1.601;HRun=0;HaplotypeScore=121.1909;InbreedingCoeff=0.9968;MQ=60.29;MQ0=4;MQRankSum=3.733;QD=29.02;ReadPosRankSum=5.655;VQSLOD=6.2213;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,16:22:42.14:555,42,0	0/0:18,0:18:51.16:0,51,847	0/0:22,0:16:45.03:0,45,684	0/0:15,0:14:30.02:0,30,468	1/1:2,42:44:99:1358,103,0	0/0:14,0:14:30.10:0,30,519	0/0:18,0:18:36.85:0,37,568	0/0:53,0:53:99:0,124,2032	0/0:13,0:13:24.08:0,24,408	0/0:31,0:31:87.30:0,87,1500	0/0:37,0:37:96.31:0,96,1631	0/0:20,0:20:48.16:0,48,801	0/0:18,0:18:39.13:0,39,674	0/0:29,0:27:72.25:0,72,1246	0/0:24,0:24:54.18:0,54,921	0/0:27,0:27:75.21:0,75,1258	0/0:22,0:22:42.06:0,42,675	0/0:28,0:28:71.60:0,72,1092	0/0:13,0:13:36.11:0,36,596	0/0:26,0:26:72.22:0,72,1193	0/0:11,0:11:30.10:0,30,495	0/0:21,0:21:57.20:0,57,980	0/0:28,0:28:78.27:0,78,1320	0/0:15,0:15:24.08:0,24,415	1/1:7,25:32:59.70:798,60,0	1/1:2,22:24:17.23:809,17,0	1/1:4,43:46:99:1318,99,0	1/1:3,14:17:42.14:559,42,0
chr10	9829865	.	AACAC	A	1741.70	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-3.490;DP=701;FS=10.788;HRun=0;HaplotypeScore=190.8711;InbreedingCoeff=0.7887;MQ=59.18;MQ0=3;MQRankSum=5.718;QD=20.25;ReadPosRankSum=4.401;VQSLOD=2.4137;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:28:33.11:0,33,607	0/0:6,0:12:7.82:0,8,95	0/0:36,0:28:12.51:0,13,274	0/0:32,0:22:25.84:0,26,475	0/0:15,0:21:17.09:0,17,266	0/0:18,0:19:5.62:0,6,72	0/0:24,0:31:12:0,12,131	0/0:39,0:39:51.13:0,51,751	0/0:16,0:24:17.93:0,18,237	0/0:23,0:28:48.15:0,48,780	0/0:12,0:23:10.65:0,11,95	0/0:19,0:24:12.04:0,12,202	0/0:20,0:28:30.10:0,30,436	0/0:19,0:23:5.54:0,6,54	0/0:20,0:37:37.12:0,37,527	0/0:17,0:30:17.95:0,18,273	0/0:18,0:21:21.98:0,22,304	0/0:10,0:10:12.01:0,12,164	1/1:9,7:17:21.06:320,21,0	1/1:10,23:34:65.32:976,65,0	1/1:13,22:35:36.12:586,36,0	0/0:16,0:16:15.02:0,15,259	0/0:9,0:10:5.59:0,6,33	0/0:14,0:25:7.75:0,8,82	0/0:17,0:24:35.99:0,36,595	0/0:13,0:24:57.19:0,57,919	0/0:14,0:28:36.08:0,36,619	0/0:10,0:17:32.06:0,32,476
chr10	9830042	.	T	TTGTC	35163.20	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-13.392;DP=691;FS=0.000;HRun=0;HaplotypeScore=89.6829;InbreedingCoeff=0.9995;MQ=78.80;MQ0=1;MQRankSum=-11.353;QD=62.79;ReadPosRankSum=7.111;VQSLOD=6.4962;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,27:33:66.22:1717,66,0	1/1:0,10:10:27.09:728,27,0	0/0:33,0:33:89.84:0,90,1495	0/0:30,0:30:80.84:0,81,1289	1/1:3,32:37:99:2322,99,0	1/1:2,14:19:36.12:952,36,0	1/1:2,25:28:60.21:1614,60,0	1/1:6,25:33:90.18:1916,90,0	1/1:3,15:19:36.12:971,36,0	1/1:1,27:30:90.27:2256,90,0	1/1:2,13:17:36.12:916,36,0	1/1:7,22:28:78.25:1968,78,0	1/1:6,15:20:60.18:1451,60,0	1/1:0,16:18:45.15:1200,45,0	1/1:1,31:32:72.25:1904,72,0	1/1:0,21:21:50.81:1366,51,0	1/1:2,18:22:48.16:1294,48,0	1/1:1,16:17:42.14:1106,42,0	0/0:30,0:30:81.24:0,81,1443	0/0:20,0:20:54.19:0,54,1017	0/0:18,0:18:54.19:0,54,1025	1/1:0,23:23:54.19:1427,54,0	1/1:2,16:21:54.19:1399,54,0	1/1:1,23:24:51.12:1372,51,0	1/1:1,25:26:69.24:1861,69,0	1/1:0,34:35:99:2680,105,0	1/1:3,30:33:75.26:1986,75,0	1/1:0,10:10:30.10:756,30,0
chr10	9830148	.	TGCACA	T	17666.96	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=9.541;DP=553;FS=1.107;HRun=0;HaplotypeScore=118.6725;InbreedingCoeff=0.9936;MQ=87.68;MQ0=0;MQRankSum=-10.588;QD=48.80;ReadPosRankSum=6.643;VQSLOD=5.1065;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,22:23:51.17:1105,51,0	1/1:0,11:11:27.09:582,27,0	0/0:20,0:20:60.19:0,60,1567	0/0:29,0:29:81.20:0,81,2303	1/1:0,13:12:18.06:390,18,0	0/0:20,0:19:54.16:0,54,1522	0/0:21,0:21:60.12:0,60,1675	1/1:1,32:33:93.05:1460,93,0	0/0:22,0:22:66.23:0,66,2065	1/1:0,9:9:27.05:541,27,0	1/1:2,5:7:15.05:325,15,0	1/1:0,23:23:66.23:1425,66,0	1/1:0,24:24:60.21:1297,60,0	1/1:0,21:21:42.14:911,42,0	1/1:0,20:20:48.16:1042,48,0	1/1:0,18:18:48.16:1039,48,0	1/1:1,22:23:57.20:1237,57,0	1/1:3,6:9:24.06:478,24,0	0/0:28,0:28:84.27:0,84,2477	0/0:24,0:24:69.15:0,69,1895	0/0:27,0:27:81.26:0,81,2462	1/1:1,19:20:36.12:781,36,0	1/1:2,8:10:17.93:390,18,0	1/1:0,24:24:54.19:1169,54,0	1/1:2,16:18:36.12:781,36,0	1/1:1,20:21:60.19:1218,60,0	1/1:0,22:22:44.82:975,45,0	1/1:0,13:13:24.08:521,24,0
chr10	9832572	.	ATGGTGGTGG	A	738.92	PASS	AB=0.704;AC=15;AF=0.395;AN=38;BaseQRankSum=0.870;DP=261;FS=11.879;HRun=0;HaplotypeScore=45.5680;InbreedingCoeff=0.3663;MQ=20.76;MQ0=91;MQRankSum=-0.975;QD=6.66;ReadPosRankSum=-1.818;VQSLOD=-0.1567;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:8:2.92:55,3,0	./.	./.	./.	0/0:4,0:2:0.47:0,0,1	1/1:7,0:1:2.60:10,3,0	./.	0/0:12,0:2:2.97:0,3,20	./.	0/0:9,0:5:0:0,0,0	0/0:4,0:2:0:0,0,0	1/1:14,6:11:2.79:73,3,0	1/1:9,1:7:12.04:230,12,0	1/1:21,1:8:14.06:293,14,0	0/0:7,0:4:0:0,0,0	1/1:10,4:9:5.82:118,6,0	0/0:5,0:2:3.01:0,3,61	./.	1/1:4,0:1:3.01:58,3,0	0/0:6,0:4:0.89:0,1,2	./.	./.	0/0:11,0:8:0.47:0,0,1	0/1:11,8:16:11.98:12,0,32	0/0:8,0:7:2.96:0,3,19	0/0:10,0:3:5.98:0,6,73	0/0:5,0:4:6.02:0,6,86	./.
chr10	9832942	.	G	GGGGTGTGTGT	6796.53	PASS	AB=0.903;AC=35;AF=0.625;AN=56;BaseQRankSum=3.851;DP=565;FS=13.850;HRun=0;HaplotypeScore=180.0520;InbreedingCoeff=0.0739;MQ=60.85;MQ0=19;MQRankSum=-5.879;QD=16.50;ReadPosRankSum=-4.502;VQSLOD=1.9143;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:29:60.87:847,61,0	1/1:5,0:5:12.04:279,12,0	0/0:41,0:19:53.80:0,54,465	0/0:29,0:14:34.78:0,35,318	1/1:2,5:13:1.91:37,2,0	0/0:20,0:20:20.11:0,20,242	0/0:36,0:36:59.18:0,59,508	0/1:44,0:43:99:217,0,542	0/0:27,0:27:39.65:0,40,520	0/1:15,0:12:21.01:400,0,21	0/1:7,0:7:2.98:199,0,3	0/1:13,0:13:92.93:191,0,93	0/1:18,0:20:99:250,0,175	0/1:21,0:21:99:207,0,125	0/1:25,0:26:99:268,0,256	0/1:10,0:22:99:307,0,182	0/1:20,0:20:99:193,0,116	0/1:15,0:15:99:230,0,133	1/1:15,0:14:31.33:475,31,0	1/1:1,8:11:4.98:157,5,0	1/1:37,0:37:61:529,61,0	1/1:7,0:7:8.88:255,9,0	1/1:5,0:10:3.01:82,3,0	0/1:7,0:18:94.50:115,0,94	1/1:2,0:3:3.01:108,3,0	1/1:20,0:21:12.50:718,12,0	1/1:2,7:16:12.04:411,12,0	1/1:2,7:12:6.02:321,6,0
chr10	9832977	.	GTGTATGTATA	G	198.23	PASS	AB=0.857;AC=4;AF=0.071;AN=56;BaseQRankSum=5.031;DP=472;FS=4.300;HRun=0;HaplotypeScore=154.0766;InbreedingCoeff=0.3830;MQ=47.66;MQ0=8;MQRankSum=-3.977;QD=3.30;ReadPosRankSum=2.335;VQSLOD=2.5836;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:20:16.11:0,16,235	0/0:6,0:6:18.04:0,18,702	0/0:10,0:4:12.04:0,12,279	0/0:11,0:4:12.04:0,12,260	0/0:14,0:13:11.53:0,12,115	1/1:10,0:10:8.47:47,8,0	0/1:15,10:25:43.06:166,0,43	0/0:45,0:43:99:0,126,2753	0/1:25,0:25:10.55:92,0,11	0/0:17,0:16:46.99:0,47,1453	0/0:14,0:14:30.10:0,30,988	0/0:11,0:10:20.10:0,20,646	0/0:17,0:17:26.97:0,27,625	0/0:20,0:20:39.12:0,39,1123	0/0:18,0:18:21.82:0,22,651	0/0:14,0:14:18.05:0,18,490	0/0:22,0:21:26.95:0,27,430	0/0:20,0:18:42.05:0,42,1118	0/0:16,0:15:34.55:0,35,735	0/0:17,0:16:30.10:0,30,798	0/0:21,0:20:12.01:0,12,380	0/0:9,0:9:15.05:0,15,504	0/0:13,0:12:11.78:0,12,199	0/0:20,0:20:14.08:0,14,454	0/0:7,0:7:18.01:0,18,248	0/0:19,0:19:48.56:0,49,1272	0/0:17,0:17:32.90:0,33,320	0/0:12,0:11:21.06:0,21,554
chr10	9832979	.	GTATGTATA	G	704.25	PASS	AB=1.000;AC=8;AF=0.143;AN=56;BaseQRankSum=4.489;DP=464;FS=0.000;HRun=0;HaplotypeScore=137.6362;InbreedingCoeff=0.5909;MQ=47.79;MQ0=6;MQRankSum=-4.226;QD=7.41;ReadPosRankSum=0.183;VQSLOD=1.8825;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:20:21.92:22,0,140	0/0:6,0:6:15.05:0,15,580	0/0:10,0:4:12.04:0,12,264	0/0:9,0:4:12.04:0,12,260	0/0:14,0:13:11.51:0,12,112	1/1:6,0:9:9.02:143,9,0	1/1:16,0:23:18.06:347,18,0	0/0:45,0:43:99:0,99,2538	1/1:4,18:26:23.76:328,24,0	0/0:17,0:16:36.59:0,37,1234	0/0:15,0:15:33.11:0,33,988	0/0:10,0:10:19.62:0,20,571	0/1:15,0:15:10.82:11,0,464	0/0:20,0:20:36.07:0,36,1026	0/0:16,0:16:17.95:0,18,563	0/0:13,0:13:15.05:0,15,389	0/0:21,0:20:0.71:0,1,377	0/0:20,0:18:35.86:0,36,976	0/0:17,0:16:29.98:0,30,732	0/0:19,0:18:39.13:0,39,983	0/0:20,0:19:9.03:0,9,325	0/0:11,0:11:21.07:0,21,606	0/0:13,0:12:11.75:0,12,181	0/0:18,0:18:14.08:0,14,409	0/0:7,0:7:18.01:0,18,200	0/0:19,0:19:45.07:0,45,1099	0/0:17,0:17:30.24:0,30,249	0/0:12,0:11:21.01:0,21,415
chr10	9832983	.	GTATA	G	585.31	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=6.440;DP=453;FS=0.747;HRun=0;HaplotypeScore=112.7838;InbreedingCoeff=0.4793;MQ=50.08;MQ0=4;MQRankSum=-4.376;QD=4.72;ReadPosRankSum=-1.459;VQSLOD=1.5736;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:20:26.46:26,0,53	0/0:7,0:7:18.04:0,18,396	0/0:11,0:6:11.07:0,11,176	0/0:8,0:4:12.04:0,12,186	0/0:15,0:14:9.07:0,9,83	1/1:3,3:7:9.02:128,9,0	1/1:14,7:21:18.06:235,18,0	0/0:45,0:44:99:0,111,1812	1/1:21,4:25:23.88:282,24,0	0/0:16,0:15:38.92:0,39,770	0/0:15,0:15:33.11:0,33,626	0/0:11,0:11:23.98:0,24,394	0/1:13,0:13:20.10:20,0,254	0/0:18,0:18:39.07:0,39,709	0/0:12,0:12:17.95:0,18,356	0/0:13,0:13:9.58:0,10,293	0/1:19,0:18:34.39:34,0,218	0/0:19,0:17:8.99:0,9,558	0/0:19,0:18:38.82:0,39,578	0/0:25,0:24:57.07:0,57,768	0/0:17,0:16:10.26:0,10,226	0/0:10,0:10:21.07:0,21,394	0/0:13,0:12:1.14:0,1,100	0/0:18,0:18:13.86:0,14,246	0/0:7,0:7:3.45:0,3,23	0/0:17,0:17:37.30:0,37,494	1/1:17,0:17:2.61:16,3,0	0/0:13,0:12:13.44:0,13,196
chr10	9833101	.	GTATATATATATATATATATATATA	G	2765.27	PASS	AB=1.000;AC=11;AF=0.262;AN=42;BaseQRankSum=3.459;DP=291;FS=0.000;HRun=0;HaplotypeScore=168.7642;InbreedingCoeff=0.6546;MQ=67.12;MQ0=9;MQRankSum=-2.103;QD=30.06;ReadPosRankSum=2.363;VQSLOD=2.6175;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:6:6.02:0,6,157	./.	./.	0/0:30,0:11:5.52:0,6,58	0/0:7,0:10:6.49:0,6,141	1/1:10,1:19:19.87:762,20,0	0/1:10,0:10:8.89:162,0,9	0/0:25,0:27:56.40:0,56,2136	1/1:7,1:15:16.87:574,17,0	0/0:10,0:12:21.06:0,21,649	0/0:11,0:11:15.05:0,15,640	0/0:1,0:1:3.01:0,3,191	./.	./.	0/0:1,0:4:9.03:0,9,287	0/0:3,0:3:0:0,0,0	0/0:12,0:14:24.08:0,24,1452	0/0:10,0:14:18.53:0,19,746	1/1:2,5:7:9.92:483,10,0	1/1:13,14:29:30.57:856,31,0	1/1:10,0:9:4.69:76,5,0	./.	./.	./.	0/0:5,0:11:12.93:0,13,316	0/0:9,0:10:18.06:0,18,404	0/0:7,0:9:2.57:0,3,119	0/0:6,0:12:24.08:0,24,603
chr10	9833267	.	ATG	A	12528.42	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=9.475;DP=543;FS=20.218;HRun=0;HaplotypeScore=77.5476;InbreedingCoeff=0.9865;MQ=72.02;MQ0=3;MQRankSum=-3.761;QD=30.34;ReadPosRankSum=1.788;VQSLOD=4.4193;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,19:24:24.06:560,24,0	1/1:0,5:5:12.04:156,12,0	0/0:24,0:23:48.12:0,48,772	0/0:25,0:25:53.52:0,54,876	1/1:3,19:21:45.15:585,45,0	1/1:3,20:23:54.18:702,54,0	1/1:3,20:23:51.12:644,51,0	1/1:7,46:53:99:1708,135,0	1/1:2,19:20:48.16:624,48,0	1/1:3,20:23:60.19:780,60,0	1/1:0,15:15:45.15:585,45,0	1/1:1,17:18:42.10:528,42,0	1/1:1,13:14:33.11:429,33,0	1/1:1,5:6:15.05:195,15,0	1/1:1,20:21:39.13:507,39,0	1/1:3,7:10:21.07:273,21,0	1/1:5,14:19:44.88:554,45,0	1/1:0,17:16:45.15:585,45,0	0/0:16,0:16:42.10:0,42,677	0/0:34,0:34:93.32:0,93,1580	0/0:31,0:31:84.29:0,84,1429	1/1:0,8:8:24.08:312,24,0	1/1:1,10:11:30.10:390,30,0	1/1:2,17:19:45.15:585,45,0	1/1:1,17:18:39.12:500,39,0	1/1:2,16:18:48.16:623,48,0	1/1:2,11:13:30.10:390,30,0	1/1:2,10:12:24.08:310,24,0
chr10	9833740	.	AC	A	2140.22	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.424;DP=743;FS=3.027;HRun=2;HaplotypeScore=70.1800;InbreedingCoeff=0.9999;MQ=83.04;MQ0=0;MQRankSum=-0.615;QD=31.02;ReadPosRankSum=1.527;VQSLOD=3.3937;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,108,1566	0/0:19,0:19:57.19:0,57,853	0/0:16,1:17:45.11:0,45,633	0/0:25,0:25:57.07:0,57,801	0/0:26,0:26:78.26:0,78,1166	1/1:0,16:16:45.15:584,45,0	1/1:0,26:26:66.21:857,66,0	0/0:26,0:26:78.26:0,78,1167	1/1:0,27:27:66.20:842,66,0	0/0:36,0:36:99:0,105,1523	0/0:25,0:25:72.24:0,72,1075	0/0:26,0:26:78.23:0,78,1141	0/0:22,0:22:66.22:0,66,989	0/0:26,0:26:78.26:0,78,1150	0/0:32,0:32:96.29:0,96,1379	0/0:42,1:43:90.46:0,90,1828	0/0:19,0:19:57.19:0,57,851	0/0:11,0:11:33.08:0,33,466	0/0:16,0:16:45.12:0,45,629	0/0:33,0:33:99:0,99,1444	0/0:24,0:24:72.24:0,72,1079	0/0:43,0:43:99:0,129,1911	0/0:30,0:30:87.27:0,87,1280	0/0:23,0:23:66.21:0,66,969	0/0:29,0:29:84.27:0,84,1238	0/0:35,0:35:99:0,105,1535	0/0:30,0:30:90.30:0,90,1348	0/0:22,0:22:66.22:0,66,986
chr10	9834297	.	CATGAATGAATGA	C	3863.08	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=7.709;DP=729;FS=0.000;HRun=0;HaplotypeScore=252.5605;InbreedingCoeff=0.9461;MQ=75.75;MQ0=1;MQRankSum=-9.293;QD=48.29;ReadPosRankSum=1.294;VQSLOD=2.7311;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:72.25:0,72,4111	0/0:9,0:9:18.06:0,18,955	0/0:23,0:21:12.04:0,12,393	0/0:18,0:16:6.29:0,6,219	0/0:21,0:22:45.14:0,45,2336	1/1:12,19:31:48.16:1667,48,0	1/1:10,9:19:27.09:863,27,0	0/0:33,0:33:60.18:0,60,2451	1/1:15,14:30:39.13:1334,39,0	0/0:26,0:27:63.22:0,63,3264	0/0:27,0:27:57.20:0,57,3203	0/0:27,0:28:57.20:0,57,3011	0/0:29,0:29:69.24:0,69,3657	0/0:33,0:33:66.23:0,66,3846	0/0:37,0:37:78.25:0,78,3961	0/0:7,0:30:60.21:0,60,3041	0/0:22,0:22:42.12:0,42,2021	0/0:22,0:21:42.14:0,42,2401	0/0:13,0:18:15.05:0,15,385	0/0:9,0:24:51.18:0,51,1320	0/0:8,0:19:36.12:0,36,1046	0/0:29,0:29:60.21:0,60,3513	0/0:31,0:30:78.26:0,78,4111	0/0:24,0:24:60.21:0,60,3469	0/0:24,0:24:45.15:0,45,2644	0/0:32,0:34:60.21:0,60,3122	0/0:36,0:36:75.25:0,75,4040	0/0:11,0:11:24.08:0,24,848
chr10	9835444	.	C	CA	17507.11	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-13.881;DP=615;FS=3.917;HRun=1;HaplotypeScore=57.5694;InbreedingCoeff=0.9978;MQ=87.04;MQ0=0;MQRankSum=-5.756;QD=39.61;ReadPosRankSum=4.132;VQSLOD=5.4652;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,22:25:66.22:985,66,0	1/1:0,7:7:21.07:314,21,0	0/0:23,0:23:66.19:0,66,826	0/0:21,0:21:57.18:0,57,724	1/1:1,27:28:72.20:1053,72,0	0/0:23,0:23:66.16:0,66,837	0/0:19,0:19:57.17:0,57,726	1/1:1,30:31:84.25:1194,84,0	0/0:20,0:20:60.19:0,60,779	1/1:0,24:24:72.23:1047,72,0	1/1:0,13:13:30.10:449,30,0	1/1:0,13:13:36.12:540,36,0	1/1:1,24:25:72.24:1072,72,0	1/1:0,19:19:45.15:675,45,0	1/1:1,24:25:66.22:989,66,0	1/1:0,21:21:63.21:944,63,0	1/1:1,20:21:57.19:854,57,0	1/1:2,24:26:60.20:899,60,0	0/0:29,0:29:66.22:0,66,1022	0/0:14,0:14:42.13:0,42,532	0/0:24,0:24:72.20:0,72,903	1/1:1,14:15:42.14:619,42,0	1/1:0,25:25:66.22:989,66,0	1/1:1,25:26:39.32:1085,39,0	1/1:1,22:23:57.19:854,57,0	1/1:0,22:22:63.16:882,63,0	1/1:2,45:47:99:1792,120,0	1/1:0,6:6:18.06:270,18,0
chr10	9835733	.	C	CT	15054.10	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-14.088;DP=706;FS=0.000;HRun=8;HaplotypeScore=66.9671;InbreedingCoeff=0.9901;MQ=79.42;MQ0=1;MQRankSum=-1.227;QD=29.23;ReadPosRankSum=1.624;VQSLOD=4.8018;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,34:37:87.23:990,87,0	1/1:0,12:12:33.10:381,33,0	0/0:20,0:21:38.89:0,39,335	0/0:21,0:19:26.62:0,27,264	1/1:4,29:33:78.22:893,78,0	0/0:24,0:24:60:0,60,540	0/0:19,0:19:51.02:0,51,467	1/1:3,23:26:66.18:750,66,0	0/0:29,0:29:75.03:0,75,686	1/1:3,28:32:87.08:973,87,0	1/1:5,26:32:56.57:871,57,0	1/1:3,20:23:57.17:658,57,0	1/1:0,25:25:75.20:853,75,0	1/1:3,18:21:54.16:623,54,0	1/1:1,27:28:72.21:831,72,0	1/1:2,19:21:50.93:589,51,0	1/1:0,28:28:81.24:935,81,0	1/1:1,29:30:84.25:969,84,0	0/0:22,0:22:54.02:0,54,494	0/0:23,0:23:66.03:0,66,604	0/0:32,0:32:84.03:0,84,769	1/1:2,21:24:66.17:749,66,0	1/1:2,22:24:54.05:623,54,0	1/1:2,30:32:84.25:969,84,0	1/1:2,21:23:54.16:623,54,0	1/1:2,26:28:78.17:874,78,0	1/1:3,27:29:69.21:796,69,0	1/1:3,3:6:9.03:104,9,0
chr10	9836878	.	AGAGAGAGAGAGAGAGAGAGAGAGAGAGT	A	13799.54	PASS	AB=0.985;AC=24;AF=0.429;AN=56;BaseQRankSum=10.899;DP=708;FS=34.808;HRun=0;HaplotypeScore=325.8053;InbreedingCoeff=-0.0261;MQ=49.32;MQ0=46;MQRankSum=-5.910;QD=31.36;ReadPosRankSum=6.500;VQSLOD=2.4061;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:48,0:47:99:1584,0,187	0/1:17,0:17:99:532,0,115	0/0:44,0:6:14.71:0,15,509	0/0:73,0:10:22.57:0,23,533	1/1:24,0:24:12.98:531,13,0	0/0:24,0:24:60.21:0,60,4710	0/0:30,0:28:65.04:0,65,4645	0/0:16,0:16:45.56:0,46,790	0/0:16,0:16:33.11:0,33,3199	0/1:37,0:36:99:607,0,473	1/1:11,0:11:9.50:399,10,0	0/1:27,0:27:16.30:987,0,16	0/1:26,0:26:64.65:1161,0,65	0/1:12,0:12:17.70:1134,0,18	1/1:26,0:26:21.07:1174,21,0	0/1:29,1:30:15.62:1214,0,16	0/1:21,1:22:99:388,0,171	0/1:15,1:15:99:445,0,144	0/0:25,0:22:63.22:0,63,4511	0/0:19,0:16:31.72:0,32,2576	0/0:21,0:21:36.12:0,36,3299	0/1:24,2:26:3.89:1107,0,4	1/1:15,0:15:7.85:339,8,0	0/1:32,0:32:99:157,0,352	1/1:19,1:20:6.02:397,6,0	0/1:6,0:6:67.03:324,0,67	0/1:33,0:33:9.18:1161,0,9	0/1:12,0:8:52.07:159,0,52
chr10	9836880	.	AGAGAGAGAGAGAGAGAGAGAGAGAGT	A	17566.31	PASS	AB=0.672;AC=34;AF=0.607;AN=56;BaseQRankSum=10.813;DP=622;FS=23.220;HRun=0;HaplotypeScore=238.2732;InbreedingCoeff=0.4839;MQ=53.65;MQ0=49;MQRankSum=-5.552;QD=49.07;ReadPosRankSum=5.901;VQSLOD=2.2492;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:2,37:38:99:2058,0,143	0/1:16,1:17:8.55:663,0,9	0/0:48,0:7:17.95:0,18,525	0/0:76,0:14:27.85:0,28,506	1/1:1,17:18:11.87:635,12,0	0/0:26,0:26:63.22:0,63,4277	0/0:29,0:27:62.40:0,62,4121	0/1:5,0:5:97.85:98,0,227	0/0:16,0:16:33.11:0,33,2920	1/1:1,22:22:55.04:1075,55,0	1/1:0,8:8:9.03:539,9,0	1/1:1,22:23:17.72:1288,18,0	1/1:1,20:21:21.07:1504,21,0	1/1:2,6:8:21.07:1363,21,0	1/1:0,20:20:21.07:1503,21,0	0/1:2,25:27:8.67:1456,0,9	0/1:2,16:18:99:400,0,148	1/1:4,8:11:9.03:525,9,0	0/0:26,0:22:63.22:0,63,4086	0/0:21,0:18:37.73:0,38,2423	0/0:20,0:21:36.12:0,36,2984	1/1:2,19:21:18.06:1246,18,0	1/1:0,13:13:7.85:433,8,0	0/1:2,19:21:99:206,0,268	1/1:2,14:16:6.02:409,6,0	1/1:0,2:2:6.02:431,6,0	1/1:0,33:33:26.92:1520,27,0	1/1:4,9:9:3.01:215,3,0
chr10	9836882	.	AGAGAGAGAGAGAGAGAGAGAGAGT	A	15286.47	PASS	AB=1.000;AC=35;AF=0.625;AN=56;BaseQRankSum=9.777;DP=650;FS=23.306;HRun=0;HaplotypeScore=247.7867;InbreedingCoeff=0.5430;MQ=53.75;MQ0=50;MQRankSum=-5.627;QD=41.31;ReadPosRankSum=6.444;VQSLOD=1.9790;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:39,0:38:99:1710,0,119	1/1:1,9:10:12.98:785,13,0	0/0:52,0:10:20.51:0,21,420	0/0:80,0:14:23.53:0,24,326	1/1:17,0:17:9.03:516,9,0	0/0:26,0:26:63.15:0,63,3777	0/0:29,0:27:63.21:0,63,3574	0/1:9,0:9:99:124,0,214	0/0:17,0:17:30.09:0,30,2617	1/1:23,0:22:52.13:879,52,0	1/1:8,0:8:9.03:435,9,0	1/1:23,0:23:18.06:1080,18,0	1/1:21,0:21:21.07:1260,21,0	1/1:13,0:13:24.07:1159,24,0	1/1:20,0:20:21.07:1259,21,0	0/1:27,0:27:16.57:1233,0,17	0/1:18,0:18:99:351,0,125	1/1:11,0:10:9.03:442,9,0	0/0:30,0:25:72.18:0,72,3683	0/0:21,0:18:36.63:0,37,2176	0/0:25,0:25:48.10:0,48,2777	1/1:21,0:21:18.06:1079,18,0	1/1:13,0:13:7.43:363,7,0	0/1:21,0:21:99:171,0,224	1/1:16,0:16:6.02:360,6,0	1/1:14,0:14:41.61:624,42,0	1/1:33,0:33:26.92:1276,27,0	1/1:13,0:9:3.01:180,3,0
chr10	9837121	.	C	CTGAA	33958.85	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-13.267;DP=766;FS=11.016;HRun=0;HaplotypeScore=122.8912;InbreedingCoeff=0.9995;MQ=59.33;MQ0=1;MQRankSum=-2.149;QD=64.68;ReadPosRankSum=3.361;VQSLOD=6.9459;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,34:40:87.25:2205,87,0	1/1:0,9:9:24.04:580,24,0	0/0:41,0:34:81.10:0,81,1324	0/0:32,0:30:72.19:0,72,1260	1/1:7,21:28:69.19:1555,69,0	0/0:27,0:27:75.26:0,75,1399	0/0:35,0:35:99:0,105,1889	1/1:9,27:39:99:2540,108,0	0/0:29,0:29:81.26:0,81,1480	1/1:2,25:31:93.26:2278,93,0	1/1:2,25:27:69.23:1692,69,0	1/1:4,19:23:51.18:1357,51,0	1/1:4,25:29:81.24:2060,81,0	1/1:2,16:19:51.17:1313,51,0	1/1:5,32:37:96.33:2438,96,0	1/1:1,24:25:72.25:1919,72,0	1/1:4,31:35:81.28:2159,81,0	1/1:0,18:19:48.12:1219,48,0	0/0:19,0:19:54.17:0,54,928	0/0:18,0:18:48.15:0,48,865	0/0:40,0:40:99:0,114,2094	1/1:2,29:32:84.29:2193,84,0	1/1:2,11:13:27.09:719,27,0	1/1:6,18:28:45.63:1168,46,0	1/1:1,16:17:45.09:1094,45,0	1/1:2,22:24:69.24:1799,69,0	1/1:2,32:34:90.31:2390,90,0	1/1:0,16:16:48.16:1280,48,0
chr10	9837836	.	G	GAC	1718.82	PASS	AB=0.784;AC=31;AF=0.596;AN=52;BaseQRankSum=-3.783;DP=504;FS=0.824;HRun=0;HaplotypeScore=88.9726;InbreedingCoeff=-0.1275;MQ=65.36;MQ0=12;MQRankSum=2.044;QD=4.46;ReadPosRankSum=-2.479;VQSLOD=1.9027;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:17,1:24:12.02:121,12,0	0/0:7,0:7:3.01:0,3,32	./.	./.	1/1:12,0:12:5.99:49,6,0	0/0:9,0:11:5.68:0,6,28	0/0:24,0:29:11.36:0,11,56	1/1:20,0:19:2.97:20,3,0	0/0:5,0:11:17.04:0,17,84	0/1:7,2:8:35.27:35,0,47	0/1:10,4:15:34.34:77,0,34	0/1:12,6:19:31.38:83,0,31	0/1:8,3:12:5.86:38,0,6	1/1:9,0:9:6.02:84,6,0	0/1:21,5:26:26.31:38,0,26	0/1:13,5:18:20.22:121,0,20	0/1:11,7:18:40.39:241,0,40	0/1:13,3:17:66.09:68,0,66	1/1:14,0:14:14.91:163,15,0	0/1:12,2:17:20.18:20,0,26	1/1:10,0:17:3:26,3,0	0/1:13,4:18:0:0,0,0	0/1:18,7:25:23.30:80,0,23	0/1:16,4:20:78.66:115,0,79	0/1:16,7:25:20.18:121,0,20	1/1:21,0:20:15.50:183,15,0	1/1:16,1:17:9.03:122,9,0	1/1:2,2:6:5.48:69,5,0
chr10	9839653	.	AC	A	16799.99	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=12.671;DP=727;FS=2.618;HRun=4;HaplotypeScore=76.6929;InbreedingCoeff=1.0000;MQ=84.74;MQ0=0;MQRankSum=-3.800;QD=32.00;ReadPosRankSum=5.502;VQSLOD=5.1973;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,47:50:99:1620,135,0	1/1:0,19:19:51.16:612,51,0	0/0:24,0:24:62.62:0,63,840	0/0:19,0:19:48.10:0,48,619	1/1:1,28:29:81.18:953,81,0	0/0:28,0:28:81.25:0,81,1102	0/0:27,0:27:78.26:0,78,1092	1/1:4,28:32:81.21:940,81,0	0/0:20,0:20:60.20:0,60,836	1/1:1,30:31:87.25:1032,87,0	1/1:1,27:28:72.14:845,72,0	1/1:0,27:27:69.21:828,69,0	1/1:0,20:20:60.18:720,60,0	1/1:0,23:23:63.19:756,63,0	1/1:1,22:23:63.19:756,63,0	1/1:0,24:24:69.21:828,69,0	1/1:3,30:33:87.22:1027,87,0	1/1:0,29:29:69.21:827,69,0	0/0:29,0:29:78.25:0,78,1066	0/0:23,0:23:63.21:0,63,881	0/0:32,0:32:96.29:0,96,1310	1/1:0,21:21:54.17:648,54,0	1/1:0,32:32:74.76:883,75,0	1/1:0,18:18:51.16:612,51,0	1/1:1,26:27:69.21:828,69,0	1/1:0,15:15:42.13:504,42,0	1/1:0,23:23:69.21:827,69,0	1/1:0,21:21:63.19:756,63,0
chr10	9843718	.	TTC	T	736.36	PASS	AB=1.000;AC=34;AF=0.680;AN=50;BaseQRankSum=-0.982;DP=554;FS=9.427;HRun=0;HaplotypeScore=120.2583;InbreedingCoeff=0.3118;MQ=60.25;MQ0=11;MQRankSum=-0.296;QD=2.21;ReadPosRankSum=2.852;VQSLOD=1.5825;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:20,0:18:0.03:0,0,0	1/1:17,0:17:2.37:8,2,0	0/0:39,0:29:0:0,0,0	0/0:43,0:23:0.47:0,0,2	1/1:20,0:20:0.21:0,0,0	1/1:19,3:21:14.11:142,14,0	1/1:11,4:15:16.45:131,16,0	1/1:32,0:32:0.50:10,0,0	1/1:11,4:15:2.94:20,3,0	1/1:27,0:27:17.04:84,17,0	./.	1/1:16,0:16:5.68:29,6,0	1/1:16,0:15:5.65:29,6,0	0/0:18,0:18:1.25:0,1,3	1/1:21,0:21:1.38:12,1,0	0/0:15,0:15:1.52:0,2,4	1/1:22,0:20:2.84:14,3,0	1/1:15,0:14:2.84:14,3,0	1/1:12,1:13:11.86:101,12,0	1/1:15,0:14:11.47:106,11,0	1/1:14,0:14:13.78:105,14,0	0/0:27,0:27:0:0,0,0	./.	0/0:26,0:25:0:0,0,0	0/0:14,0:14:0:0,0,0	0/1:13,0:13:8.43:8,0,14	1/1:19,0:19:2.84:14,3,0	./.
chr10	9843744	.	CTCTCTCTCTCTT	C	2476.86	PASS	AB=0.960;AC=26;AF=0.464;AN=56;BaseQRankSum=0.852;DP=485;FS=4.607;HRun=0;HaplotypeScore=149.4674;InbreedingCoeff=0.0991;MQ=48.64;MQ0=19;MQRankSum=-0.434;QD=7.72;ReadPosRankSum=2.813;VQSLOD=2.2996;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:21:6.75:7,0,18	0/1:12,0:12:28.07:29,0,28	0/0:6,0:2:6.02:0,6,97	0/0:14,0:4:9.36:0,9,100	0/0:17,1:18:0:0,0,1	0/1:21,0:19:29.98:30,0,851	0/0:23,0:23:21.67:0,22,777	1/1:16,0:16:16.96:321,17,0	0/0:16,0:16:32.25:0,32,540	0/1:21,1:21:14.59:629,0,15	1/1:16,2:18:2.91:25,3,0	1/1:20,1:20:6.02:159,6,0	1/1:18,1:18:8.69:198,9,0	1/1:12,0:12:5.22:99,5,0	1/1:23,0:23:9.01:184,9,0	0/1:8,10:18:13.76:141,0,14	0/1:19,0:17:8.04:125,0,8	0/1:20,0:16:31.94:291,0,32	0/0:11,0:10:29.53:0,30,575	0/0:20,0:19:10.14:0,10,434	0/0:15,0:15:25.88:0,26,614	0/0:19,0:18:3.44:0,3,21	0/0:22,0:20:0:0,0,0	0/1:29,0:28:16.47:49,0,16	1/1:12,2:14:0.62:21,1,0	0/1:13,0:12:45.94:206,0,46	0/1:17,0:17:11.14:88,0,11	1/1:2,0:2:5.94:42,6,0
chr10	9843746	.	CTCTCTCTCTT	C	3067.95	PASS	AB=0.707;AC=35;AF=0.625;AN=56;BaseQRankSum=-2.074;DP=462;FS=3.063;HRun=0;HaplotypeScore=134.6697;InbreedingCoeff=0.4999;MQ=48.75;MQ0=18;MQRankSum=-0.950;QD=9.44;ReadPosRankSum=1.797;VQSLOD=2.3272;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:7,17:20:2.75:52,3,0	1/1:2,10:12:3.48:53,3,0	0/0:4,0:2:3.01:0,3,44	0/0:12,0:4:6.49:0,6,66	0/1:3,14:17:0:0,0,1	0/1:21,0:19:30.38:30,0,662	0/0:22,0:22:15.55:0,16,533	1/1:3,12:15:36.35:450,36,0	0/0:16,0:16:26.22:0,26,386	1/1:4,16:19:40.35:797,40,0	1/1:2,16:18:2.91:25,3,0	1/1:2,18:19:6.02:194,6,0	1/1:2,16:17:8.76:251,9,0	1/1:2,9:11:3.86:44,4,0	1/1:2,19:21:6.49:158,6,0	1/1:14,3:17:8.20:151,8,0	1/1:5,13:16:8.93:141,9,0	1/1:18,2:16:20.01:355,20,0	0/0:11,0:10:26.08:0,26,403	0/0:19,0:18:9.56:0,10,322	0/0:15,0:15:22.55:0,23,441	0/0:3,13:15:0.47:0,0,1	0/0:4,18:20:0:0,0,0	1/1:6,21:26:2.99:24,3,0	1/1:11,4:15:4.08:47,4,0	0/1:3,9:11:12.97:254,0,13	1/1:1,16:17:8.26:172,8,0	1/1:2,0:2:5.94:42,6,0
chr10	9843754	.	CTT	C	1693.08	PASS	AB=0.867;AC=41;AF=0.788;AN=52;BaseQRankSum=-0.501;DP=415;FS=1.990;HRun=3;HaplotypeScore=114.3556;InbreedingCoeff=0.1642;MQ=47.79;MQ0=15;MQRankSum=2.382;QD=4.85;ReadPosRankSum=4.539;VQSLOD=0.0774;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:17:2.96:19,3,0	1/1:11,0:11:2.94:18,3,0	./.	./.	0/0:17,0:17:0:0,0,1	1/1:19,0:18:7.59:143,8,0	0/1:20,1:21:27.43:27,0,87	1/1:14,0:13:20.72:145,21,0	0/0:14,0:14:15.03:0,15,85	1/1:18,0:17:36.38:294,36,0	1/1:18,0:18:2.91:25,3,0	1/1:21,0:19:6.01:55,6,0	1/1:17,0:16:5.99:52,6,0	1/1:10,0:10:2.98:22,3,0	1/1:20,0:20:5.90:43,6,0	1/1:16,0:16:8.81:56,9,0	1/1:18,0:16:8.88:62,9,0	1/1:16,0:12:17.20:183,17,0	0/1:5,6:10:19.04:163,0,19	0/1:19,0:19:9.17:108,0,9	1/1:12,0:12:8.67:99,9,0	0/0:14,0:13:0:0,0,0	0/0:21,0:19:0:0,0,0	1/1:25,0:24:2.74:20,3,0	1/1:13,0:13:5.04:48,5,0	1/1:11,0:10:20.91:163,21,0	1/1:16,0:16:3:26,3,0	1/1:2,0:2:5.94:42,6,0
chr10	9844072	.	GA	G	10909.86	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=11.165;DP=598;FS=2.096;HRun=8;HaplotypeScore=74.1411;InbreedingCoeff=0.9945;MQ=82.61;MQ0=0;MQRankSum=-6.394;QD=24.35;ReadPosRankSum=3.527;VQSLOD=5.6700;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,46:47:99:1245,129,0	1/1:2,9:11:27.04:261,27,0	0/0:19,0:19:30.19:0,30,433	0/0:19,0:19:47.94:0,48,537	1/1:1,26:27:69.10:665,69,0	0/0:19,0:19:57.15:0,57,666	0/0:18,0:18:54.15:0,54,641	1/1:2,20:22:60.10:579,60,0	0/0:21,0:21:63.19:0,63,761	1/1:4,20:24:60.09:579,60,0	1/1:3,13:16:33.04:316,33,0	1/1:1,12:13:36.06:348,36,0	1/1:1,18:19:45.07:435,45,0	1/1:4,17:21:51.07:493,51,0	1/1:0,19:19:54.09:522,54,0	1/1:2,25:27:69.11:666,69,0	1/1:2,31:33:69:666,69,0	1/1:2,12:14:36.06:348,36,0	0/0:19,0:19:54.15:0,54,635	0/0:16,0:16:45.13:0,45,534	0/0:19,0:19:51.13:0,51,601	1/1:1,29:30:69.10:666,69,0	1/1:1,21:22:60.10:579,60,0	1/1:2,20:22:54.08:521,54,0	1/1:3,22:25:57.09:550,57,0	1/1:2,28:30:84.12:805,84,0	1/1:1,21:22:57.09:550,57,0	1/1:0,4:4:12.02:116,12,0
chr10	9844312	.	CTGTGTGTGTGTGTGTG	C	3779.21	PASS	AB=0.980;AC=36;AF=0.643;AN=56;BaseQRankSum=5.639;DP=585;FS=3.437;HRun=0;HaplotypeScore=216.2216;InbreedingCoeff=0.4085;MQ=53.33;MQ0=14;MQRankSum=-2.997;QD=8.63;ReadPosRankSum=-0.447;VQSLOD=2.6483;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,23:41:0.47:1,0,0	1/1:12,0:10:5.49:205,5,0	0/0:28,0:20:3.01:0,3,45	0/0:26,0:16:6.02:0,6,144	1/1:15,9:24:0.94:2,1,0	0/0:14,0:14:6.52:0,7,316	0/0:9,0:16:11.99:0,12,147	0/1:20,0:19:8.29:71,0,8	1/1:9,0:16:8.19:122,8,0	0/1:24,0:23:5.29:275,0,5	1/1:8,8:15:3.01:122,3,0	1/1:25,0:25:6.02:182,6,0	1/1:28,0:31:9.03:304,9,0	1/1:28,0:31:12.51:341,13,0	0/1:28,0:29:4.94:343,0,5	1/1:25,0:26:4.78:102,5,0	1/1:17,3:21:9.01:125,9,0	1/1:15,0:15:9.03:301,9,0	0/0:17,0:17:15.05:0,15,767	0/0:13,0:13:15.04:0,15,521	0/0:15,0:14:30.08:0,30,1390	1/1:27,0:26:3.64:108,4,0	0/0:17,0:18:0.47:0,0,1	1/1:8,4:14:2.98:23,3,0	1/1:12,2:14:9.01:215,9,0	1/1:11,7:17:7.14:686,7,0	0/1:20,0:20:10.99:121,0,11	1/1:7,2:8:3.01:131,3,0
chr10	9844337	.	TGTGTGTGTGTGTGTGTGAGAGA	T	5841.94	PASS	AB=0.838;AC=32;AF=0.571;AN=56;BaseQRankSum=8.090;DP=631;FS=1.329;HRun=0;HaplotypeScore=234.5735;InbreedingCoeff=0.4374;MQ=37.67;MQ0=30;MQRankSum=-4.575;QD=13.62;ReadPosRankSum=1.941;VQSLOD=3.1445;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:45:2.68:0,3,19	1/1:5,7:10:5.80:328,6,0	0/0:7,0:1:3.01:0,3,45	0/0:10,0:3:6.02:0,6,143	0/0:27,0:26:0.05:0,0,0	0/0:18,0:18:18.77:0,19,1013	0/0:20,0:20:23.72:0,24,420	1/1:17,0:15:2.74:80,3,0	0/1:25,0:23:99:102,0,376	1/1:14,16:27:20.34:805,20,0	1/1:24,0:21:3.48:124,3,0	1/1:7,26:33:9.03:356,9,0	1/1:13,22:35:7.83:486,8,0	1/1:10,18:30:12.51:558,13,0	0/1:10,18:28:4.94:578,0,5	1/1:6,21:26:4.37:163,4,0	1/1:21,0:19:14.44:228,14,0	1/1:4,10:14:9:466,9,0	0/0:15,0:15:41.17:0,41,1666	0/0:14,0:13:18.05:0,18,692	0/0:21,0:18:48.02:0,48,1987	1/1:13,18:29:3.23:149,3,0	0/0:11,13:24:0.47:0,0,1	1/1:20,0:18:3.79:25,4,0	1/1:19,0:17:9.01:215,9,0	1/1:21,0:19:32.02:789,32,0	0/1:21,0:30:17.26:253,0,17	0/1:8,0:7:99:139,0,117
chr10	9844353	.	TGAGAGA	T	1977.86	PASS	AB=0.888;AC=30;AF=0.600;AN=50;BaseQRankSum=7.560;DP=582;FS=9.891;HRun=0;HaplotypeScore=178.1935;InbreedingCoeff=0.5933;MQ=37.06;MQ0=27;MQRankSum=-5.855;QD=5.01;ReadPosRankSum=1.303;VQSLOD=2.0449;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:45,3:48:2.55:0,3,19	1/1:9,0:9:6.01:103,6,0	./.	0/0:2,0:1:3.01:0,3,34	0/1:21,2:22:0.23:0,0,0	0/0:17,0:17:20.06:0,20,391	0/0:16,0:16:9.90:0,10,236	./.	0/0:26,0:25:12.26:0,12,316	1/1:23,1:24:32.63:536,33,0	0/1:13,6:19:0:0,0,0	1/1:31,0:33:8.96:153,9,0	1/1:32,0:33:8.51:155,9,0	1/1:26,0:27:11.89:201,12,0	1/1:23,1:25:12.04:207,12,0	1/1:23,0:24:3.01:46,3,0	1/1:12,1:15:8.93:142,9,0	1/1:14,0:13:9.03:153,9,0	0/0:11,0:10:18.06:0,18,419	0/0:11,0:10:6.02:0,6,134	0/0:18,0:14:20.96:0,21,401	1/1:27,0:26:2.82:48,3,0	0/1:22,0:24:0:0,0,0	1/1:14,7:20:0.77:2,1,0	./.	1/1:22,0:21:29.46:181,29,0	1/1:35,1:33:9.93:192,10,0	0/1:7,0:7:21.89:22,0,44
chr10	9845951	.	AG	A	2223.84	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=11.078;DP=594;FS=18.913;HRun=2;HaplotypeScore=117.4422;InbreedingCoeff=0.9231;MQ=90.16;MQ0=0;MQRankSum=-3.619;QD=34.21;ReadPosRankSum=1.307;VQSLOD=1.8318;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:31.93:0,32,289	0/0:5,0:5:14.72:0,15,91	0/0:22,1:23:63.21:0,63,917	0/0:26,0:26:66.17:0,66,900	0/0:18,0:18:14.75:0,15,188	1/1:1,28:29:84.25:1028,84,0	1/1:0,23:23:69.22:855,69,0	0/0:27,0:27:78.24:0,78,1047	1/1:0,13:13:39.12:483,39,0	0/0:28,0:28:84.26:0,84,1126	0/0:22,0:22:63.16:0,63,819	0/0:16,0:16:48.15:0,48,645	0/0:27,0:27:81.27:0,81,1131	0/0:25,0:25:70.47:0,70,953	0/0:21,0:21:63.21:0,63,878	0/0:21,0:20:60.67:0,61,830	0/0:18,0:18:54.17:0,54,740	0/0:16,0:16:41.88:0,42,539	0/0:24,0:24:69.10:0,69,947	0/0:26,0:26:78.21:0,78,1053	0/0:29,0:29:87.27:0,87,1189	0/0:25,0:25:72.21:0,72,965	0/0:20,0:20:57.18:0,57,784	0/0:23,0:23:66.22:0,66,913	0/0:19,0:19:6.82:0,7,121	0/0:15,0:15:45.14:0,45,613	0/0:24,0:24:69.21:0,69,931	0/0:2,0:2:6.02:0,6,86
chr10	9849044	.	GCTT	G	2330.11	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.381;DP=691;FS=4.103;HRun=0;HaplotypeScore=97.2774;InbreedingCoeff=0.9887;MQ=85.90;MQ0=0;MQRankSum=-2.680;QD=31.49;ReadPosRankSum=2.948;VQSLOD=4.1394;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,28:32:66.22:1047,66,0	0/0:10,0:10:27.09:0,27,590	0/0:29,0:29:74.23:0,74,1521	0/0:25,0:25:59.84:0,60,1094	1/1:4,22:26:48.16:760,48,0	0/0:24,0:24:66.23:0,66,1442	0/0:26,0:26:78.25:0,78,1663	0/0:33,0:33:90.31:0,90,1956	0/0:25,0:25:63.22:0,63,1378	0/0:30,0:30:66.23:0,66,1389	0/0:20,0:20:51.15:0,51,1073	0/0:20,0:20:54.19:0,54,1166	0/0:24,0:24:63.22:0,63,1377	0/0:17,0:17:48.16:0,48,1048	0/0:33,0:33:90.31:0,90,1962	0/0:33,0:33:99:0,99,2165	0/0:28,0:28:78.25:0,78,1640	0/0:20,0:20:60.21:0,60,1312	0/0:16,0:16:45.15:0,45,984	0/0:35,0:35:99:0,102,2216	0/0:34,0:34:96.33:0,96,2099	0/0:23,0:23:66.21:0,66,1387	0/0:20,0:20:60.16:0,60,1254	0/0:24,0:24:72.16:0,72,1525	1/1:0,16:16:42.14:666,42,0	0/0:35,0:35:99:0,99,2126	0/0:27,0:27:81.26:0,81,1729	0/0:5,0:5:12.04:0,12,262
chr10	9850581	.	A	ATATATATATATAT	2860.67	PASS	AB=0.935;AC=37;AF=0.685;AN=54;BaseQRankSum=0.845;DP=168;FS=14.040;HRun=0;HaplotypeScore=80.8480;InbreedingCoeff=0.1265;MQ=76.85;MQ0=3;MQRankSum=-1.113;QD=19.87;ReadPosRankSum=-3.322;VQSLOD=0.0565;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:2,0:2:1.67:0,2,25	1/1:4,0:4:11.99:100,12,0	0/0:3,0:2:5.99:0,6,48	0/0:12,0:8:2.34:0,2,84	0/0:4,0:3:6:0,6,74	1/1:3,0:3:5.99:49,6,0	./.	0/1:17,0:16:11.91:249,0,12	1/1:2,0:2:5.99:48,6,0	1/1:5,0:6:8.91:158,9,0	1/1:9,0:10:10.57:191,11,0	1/1:3,0:4:5.99:50,6,0	1/1:5,0:5:12:193,12,0	1/1:6,0:7:3.65:293,4,0	1/1:1,0:1:3:25,3,0	0/1:3,0:4:4.41:132,0,4	0/1:3,1:4:16.51:184,0,17	0/1:12,0:12:13.41:148,0,13	0/1:17,0:18:81.63:82,0,623	0/1:10,0:10:72.91:73,0,337	0/1:11,0:10:23.56:24,0,389	1/1:5,0:5:14.98:125,15,0	1/1:1,0:1:3:25,3,0	1/1:4,0:4:11.99:129,12,0	0/0:2,0:2:5.99:0,6,51	1/1:4,0:4:11.97:156,12,0	1/1:3,0:3:2.99:24,3,0	1/1:6,3:9:15.44:562,15,0
chr10	9850594	.	G	GT	3944.14	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=0.122;DP=241;FS=5.891;HRun=3;HaplotypeScore=50.6543;InbreedingCoeff=0.8995;MQ=74.73;MQ0=1;MQRankSum=-2.149;QD=33.14;ReadPosRankSum=2.219;VQSLOD=3.9790;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:5:12.03:0,12,143	1/1:0,6:6:18.06:252,18,0	0/0:4,0:4:9.03:0,9,108	0/0:9,0:9:14.71:0,15,150	0/0:10,0:9:27.08:0,27,324	0/0:4,0:4:12.04:0,12,144	0/0:4,0:4:9.03:0,9,108	0/0:31,0:31:87.26:0,87,1033	0/0:5,0:5:15.05:0,15,180	1/1:2,9:11:27.09:375,27,0	1/1:2,12:14:36.12:504,36,0	1/1:1,4:5:9.03:126,9,0	1/1:0,7:7:18.05:252,18,0	1/1:1,9:10:21.07:294,21,0	1/1:1,4:5:9.03:126,9,0	1/1:0,3:3:9.03:126,9,0	1/1:1,3:4:9.03:126,9,0	1/1:1,15:16:45.15:630,45,0	0/0:20,0:20:54.15:0,54,637	0/0:15,0:15:45.13:0,45,528	0/0:11,0:10:27.08:0,27,324	1/1:1,8:9:21.07:294,21,0	1/1:2,1:3:5.75:84,6,0	1/1:0,5:5:12.04:168,12,0	0/0:4,0:4:12.04:0,12,144	1/1:0,5:5:15.05:210,15,0	1/1:0,6:6:9.03:126,9,0	1/1:2,8:10:18.06:252,18,0
chr10	9851096	.	C	CCT	3682.66	PASS	AB=0.568;AC=26;AF=0.464;AN=56;BaseQRankSum=4.756;DP=620;FS=1.051;HRun=0;HaplotypeScore=115.9182;InbreedingCoeff=-0.4767;MQ=70.50;MQ0=1;MQRankSum=-2.008;QD=7.32;ReadPosRankSum=4.517;VQSLOD=3.1497;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:13,0:33:74.60:181,0,75	0/1:2,0:7:36.54:37,0,49	0/0:12,0:13:26.35:0,26,311	0/0:7,0:6:2.14:0,2,38	0/1:6,0:31:62.48:153,0,62	0/0:8,0:29:46.17:0,46,295	0/1:6,0:23:32.33:32,0,182	0/0:16,0:43:64.67:0,65,621	0/0:4,0:25:42.75:0,43,201	0/1:9,0:21:99:125,0,202	0/1:4,0:24:69.37:193,0,69	0/1:8,1:28:99:145,0,154	0/1:5,0:25:55.46:205,0,55	0/1:7,0:18:68.75:69,0,117	1/1:1,0:19:15.45:236,15,0	0/1:2,0:21:20.18:175,0,20	0/1:2,0:20:9.23:165,0,9	0/1:6,0:15:12.89:164,0,13	0/1:1,0:13:43.63:111,0,44	1/1:4,0:27:1.62:253,2,0	0/1:3,0:22:44.20:167,0,44	0/1:2,0:21:16.33:178,0,16	0/1:8,0:27:69.82:250,0,70	0/1:3,0:13:13.16:137,0,13	0/1:6,0:25:35.50:110,0,36	0/1:7,0:31:99:245,0,129	0/1:4,0:22:74.82:176,0,75	1/1:0,0:15:23.58:176,24,0
chr10	9851222	.	CTT	C	3026.99	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.490;DP=651;FS=12.606;HRun=3;HaplotypeScore=81.3209;InbreedingCoeff=0.9940;MQ=78.55;MQ0=2;MQRankSum=-3.348;QD=36.47;ReadPosRankSum=3.601;VQSLOD=2.4616;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,31:32:87.30:1332,87,0	0/0:5,0:5:15.04:0,15,245	0/0:20,0:20:60.14:0,60,1050	0/0:17,0:17:48.14:0,48,828	1/1:1,24:24:54.18:827,54,0	0/0:24,0:24:69.24:0,69,1320	0/0:19,0:19:57.17:0,57,1037	0/0:34,0:34:99:0,102,1905	0/0:20,0:20:60.21:0,60,1152	0/0:20,0:20:60.21:0,60,1150	0/0:23,0:23:66.22:0,66,1242	0/0:27,0:27:78.24:0,78,1414	0/0:29,0:29:87.28:0,87,1632	0/0:28,0:28:84.28:0,84,1570	0/0:30,0:30:90.31:0,90,1719	0/0:27,0:27:81.28:0,81,1559	0/0:24,0:24:72.25:0,72,1391	0/0:16,0:16:48.16:0,48,927	0/0:19,0:18:54.19:0,54,1039	0/0:30,0:30:90.31:0,90,1717	0/0:35,0:35:99:0,105,1987	0/0:14,0:14:42.14:0,42,787	0/0:19,0:19:57.20:0,57,1101	0/0:27,0:27:81.25:0,81,1511	1/1:1,25:25:66.22:1011,66,0	0/0:28,0:28:81.28:0,81,1565	0/0:24,0:24:69.23:0,69,1295	0/0:9,0:9:27.09:0,27,513
chr10	9853700	.	G	GTC	1447.73	PASS	AB=1.000;AC=16;AF=0.286;AN=56;BaseQRankSum=-1.960;DP=433;FS=1.685;HRun=0;HaplotypeScore=89.3789;InbreedingCoeff=0.6169;MQ=75.04;MQ0=2;MQRankSum=1.256;QD=8.99;ReadPosRankSum=-1.708;VQSLOD=2.7850;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:13:17.99:177,18,0	0/0:7,0:7:8.97:0,9,79	0/0:17,0:11:21.03:0,21,206	0/0:13,0:12:11.72:0,12,216	1/1:17,3:20:23.16:239,23,0	1/1:12,0:12:15.17:125,15,0	1/1:19,1:20:35.08:237,35,0	1/1:20,0:20:40.52:354,41,0	0/1:17,0:17:28.56:115,0,29	0/0:9,0:9:23.94:0,24,218	0/0:12,0:12:32.90:0,33,292	0/0:14,0:14:23.98:0,24,218	0/0:20,0:20:56.94:0,57,506	0/0:18,0:18:42.05:0,42,395	0/0:21,0:21:45.07:0,45,440	0/0:25,0:24:55.08:0,55,600	0/0:15,0:15:35.88:0,36,333	0/0:18,0:18:45:0,45,409	0/1:14,0:14:36.26:120,0,36	0/1:25,0:25:13.88:160,0,14	0/1:15,0:15:50.29:50,0,63	0/0:11,0:11:27:0,27,237	0/0:13,0:13:30.02:0,30,275	0/0:20,0:20:45.02:0,45,411	1/1:5,0:5:8.15:63,8,0	0/0:17,0:17:35.97:0,36,328	0/0:17,0:17:48.07:0,48,552	0/0:4,0:4:11.99:0,12,101
chr10	9853703	.	TC	T	2127.57	PASS	AB=0.965;AC=33;AF=0.589;AN=56;BaseQRankSum=-2.945;DP=430;FS=3.223;HRun=12;HaplotypeScore=76.9627;InbreedingCoeff=0.5648;MQ=76.60;MQ0=2;MQRankSum=-0.157;QD=7.52;ReadPosRankSum=2.928;VQSLOD=2.8123;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:11:11.46:0,11,68	1/1:3,3:6:5.97:46,6,0	0/1:19,1:13:8.82:9,0,90	0/1:14,0:12:15.76:16,0,36	0/0:21,0:21:28.03:0,28,135	0/0:8,0:10:17.07:0,17,88	0/0:20,0:21:38.39:0,38,172	0/0:19,0:19:8.40:0,8,42	0/1:11,1:14:15.87:16,0,91	1/1:5,2:8:16.33:104,16,0	1/1:8,4:12:11.88:88,12,0	1/1:3,10:13:14.92:116,15,0	1/1:7,11:20:34.36:245,34,0	1/1:4,11:17:30.94:221,31,0	1/1:5,11:17:28.57:233,29,0	1/1:10,11:23:8.45:293,8,0	1/1:5,10:17:33.95:243,34,0	1/1:8,9:18:25.89:192,26,0	0/1:14,1:15:19.18:19,0,99	0/0:24,1:25:23.13:0,23,210	0/0:14,0:14:29.35:0,29,195	1/1:9,3:12:2.95:23,3,0	1/1:9,7:16:17.90:139,18,0	1/1:9,9:19:25.84:188,26,0	0/0:5,0:5:8.47:0,8,46	1/1:8,6:16:18.97:126,19,0	0/0:21,0:21:35.79:0,36,332	0/1:5,0:5:16.84:17,0,19
chr10	9853704	.	C	CT	2095.62	PASS	AB=0.941;AC=18;AF=0.321;AN=56;BaseQRankSum=-3.733;DP=426;FS=0.000;HRun=1;HaplotypeScore=84.5435;InbreedingCoeff=0.5804;MQ=75.93;MQ0=2;MQRankSum=1.243;QD=12.62;ReadPosRankSum=-2.411;VQSLOD=1.3927;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:9,1:10:5.72:126,0,6	0/1:6,0:6:11:11,0,56	0/0:19,0:12:23.31:0,23,221	0/0:14,0:13:21.01:0,21,214	1/1:10,10:20:26.87:293,27,0	1/1:11,0:11:20.95:200,21,0	1/1:4,17:21:39.48:490,39,0	1/1:4,16:20:44.73:383,45,0	0/1:9,5:14:0.70:256,0,1	0/0:8,0:8:23.06:0,23,164	0/0:12,0:12:32.74:0,33,253	0/0:15,0:15:23.74:0,24,166	0/0:20,0:20:53.18:0,53,376	0/0:17,0:17:41.54:0,42,288	0/0:16,0:16:44.54:0,45,328	0/0:23,0:22:31.59:0,32,419	0/0:17,0:17:15.42:0,15,214	0/0:16,0:16:44.55:0,45,316	0/1:15,0:15:9:142,0,9	1/1:25,0:25:32.45:231,32,0	0/1:14,0:14:27.55:63,0,28	0/0:13,0:13:26.95:0,27,227	0/0:15,0:15:29.72:0,30,213	0/0:18,0:18:44.64:0,45,327	1/1:5,0:5:8.24:86,8,0	0/0:15,0:15:33.67:0,34,255	0/0:21,0:21:54.07:0,54,599	0/1:5,0:5:7.84:8,0,86
chr10	9854268	.	ATCTCTCTCTC	A	378.61	PASS	AB=1.000;AC=11;AF=0.289;AN=38;BaseQRankSum=3.912;DP=566;FS=5.718;HRun=0;HaplotypeScore=178.6940;InbreedingCoeff=0.5653;MQ=77.52;MQ0=8;MQRankSum=0.287;QD=3.38;ReadPosRankSum=1.645;VQSLOD=2.5179;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:24:14.38:141,14,0	./.	./.	./.	1/1:18,2:20:6.01:79,6,0	0/0:22,0:22:6.43:0,6,44	0/0:22,0:22:18.14:0,18,347	0/0:38,0:38:4.82:0,5,33	0/0:18,0:19:15.89:0,16,399	0/0:26,0:26:19.30:0,19,348	./.	0/0:24,0:24:9.02:0,9,282	0/0:20,0:20:16.52:0,17,397	./.	0/0:22,0:22:12.48:0,12,224	0/0:18,0:18:14.17:0,14,292	0/0:12,0:12:9.03:0,9,271	1/1:6,6:13:4.70:166,5,0	1/1:20,0:21:3.01:68,3,0	./.	./.	1/1:14,0:14:3:25,3,0	./.	0/0:25,0:24:3.01:0,3,127	0/1:20,0:19:31.30:31,0,152	0/0:23,0:23:16.57:0,17,374	0/0:17,0:17:10.24:0,10,142	./.
chr10	9854319	.	TCACACACATACACACACA	T	1048.85	PASS	AB=1.000;AC=27;AF=0.563;AN=48;BaseQRankSum=-1.654;DP=425;FS=25.362;HRun=0;HaplotypeScore=122.4424;InbreedingCoeff=0.1255;MQ=37.36;MQ0=50;MQRankSum=-0.251;QD=3.25;ReadPosRankSum=2.075;VQSLOD=0.5019;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:25:19.91:117,20,0	./.	./.	./.	./.	1/1:17,0:15:7.23:66,7,0	1/1:27,0:19:15.66:92,16,0	0/1:15,0:14:7.12:162,0,7	1/1:7,0:20:8:244,8,0	1/1:18,0:14:4.40:40,4,0	0/0:8,0:7:3.01:0,3,104	0/1:14,0:14:0:0,0,0	0/1:14,0:12:40.38:40,0,381	0/0:14,0:13:3.48:0,3,50	0/1:17,0:15:17.52:18,0,25	0/1:19,0:19:78.31:78,0,104	0/0:13,0:10:3.01:0,3,111	0/1:15,0:12:42.67:43,0,194	1/1:12,0:9:22.75:161,23,0	1/1:9,17:26:2.94:18,3,0	1/1:29,0:23:1.12:3,1,0	0/1:12,0:11:0:0,0,0	0/0:7,0:6:0.21:0,0,1	0/0:37,0:32:3.01:0,3,37	1/1:11,0:10:8.72:71,9,0	0/1:9,0:9:29.53:30,0,102	0/1:17,0:16:0:0,0,0	0/0:3,0:1:3.01:0,3,77
chr10	9854324	.	CACAT	C	1621.59	PASS	AB=0.549;AC=40;AF=0.870;AN=46;BaseQRankSum=-0.149;DP=421;FS=0.000;HRun=0;HaplotypeScore=89.1550;InbreedingCoeff=0.2985;MQ=37.32;MQ0=49;MQRankSum=2.031;QD=4.69;ReadPosRankSum=1.871;VQSLOD=1.7174;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:23:16.31:105,16,0	./.	./.	./.	./.	1/1:16,0:14:5.63:42,6,0	1/1:24,0:16:16.56:93,17,0	1/1:16,0:15:8.12:168,8,0	1/1:20,0:19:5.52:65,6,0	1/1:19,0:15:8.64:62,9,0	1/1:6,0:6:3.01:56,3,0	0/1:2,13:15:0:0,0,0	1/1:13,0:11:23.23:288,23,0	1/1:1,13:14:2.69:15,3,0	1/1:18,0:15:5.30:71,5,0	1/1:16,3:19:14.22:148,14,0	1/1:12,0:8:2.93:56,3,0	1/1:13,1:11:7.89:84,8,0	1/1:13,0:10:14.10:140,14,0	1/1:27,0:26:2.94:18,3,0	1/1:30,0:25:0.09:0,0,0	0/0:2,10:11:0:0,0,0	0/0:6,2:7:0:0,0,0	./.	1/1:11,0:10:8.74:71,9,0	1/1:11,0:11:23.70:158,24,0	0/1:4,14:16:0:0,0,0	1/1:3,0:1:3.01:55,3,0
chr10	9854326	.	CAT	C	1448.90	PASS	AB=1.000;AC=38;AF=0.864;AN=44;BaseQRankSum=-0.584;DP=413;FS=0.000;HRun=0;HaplotypeScore=85.5868;InbreedingCoeff=0.2616;MQ=37.19;MQ0=49;MQRankSum=1.497;QD=4.59;ReadPosRankSum=2.283;VQSLOD=1.8591;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:22:11.32:89,11,0	./.	./.	./.	./.	1/1:15,0:13:5.63:42,6,0	1/1:23,0:15:14.52:87,15,0	1/1:16,0:15:8.85:169,9,0	1/1:19,0:18:5.67:40,6,0	1/1:6,12:14:8.50:62,8,0	1/1:6,0:6:3.01:33,3,0	./.	1/1:13,0:11:23.14:214,23,0	1/1:13,1:14:2.82:32,3,0	1/1:19,0:16:5.44:57,5,0	1/1:19,0:19:14.20:125,14,0	1/1:4,8:8:2.92:34,3,0	1/1:14,0:11:7.56:103,8,0	1/1:9,3:9:13.98:140,14,0	1/1:27,0:26:2.94:18,3,0	0/1:30,0:25:0.12:0,0,0	0/0:12,0:11:0:0,0,0	0/1:8,0:7:0.05:0,0,0	./.	1/1:11,0:10:8.86:71,9,0	1/1:0,11:11:23.74:175,24,0	0/0:16,0:14:0:0,0,0	1/1:3,0:1:3.01:33,3,0
chr10	9855108	.	C	CTTT	4340.80	PASS	AB=0.615;AC=39;AF=0.696;AN=56;BaseQRankSum=7.378;DP=631;FS=0.000;HRun=9;HaplotypeScore=122.4751;InbreedingCoeff=0.4408;MQ=75.82;MQ0=1;MQRankSum=-0.247;QD=8.46;ReadPosRankSum=3.620;VQSLOD=0.8283;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,29:45:79.49:1452,79,0	1/1:1,0:7:6.23:13,6,0	0/0:22,0:19:15.79:0,16,339	0/1:15,0:15:4.53:5,0,169	1/1:5,17:25:57.13:994,57,0	0/0:24,0:24:63.15:0,63,779	0/0:27,0:28:75.14:0,75,927	0/0:26,0:26:54.07:0,54,681	0/0:16,0:16:42.11:0,42,529	0/1:6,0:31:18.30:18,0,36	1/1:1,0:16:22.32:91,22,0	0/1:5,0:26:11.11:24,0,11	0/1:3,0:25:12.47:23,0,12	1/1:2,0:17:16.20:35,16,0	0/1:2,0:26:9.98:26,0,10	1/1:3,0:19:16.20:35,16,0	1/1:6,0:33:12.53:37,13,0	1/1:4,0:23:2.49:24,2,0	0/1:3,0:15:9.54:10,0,26	1/1:4,0:23:24.75:94,25,0	1/1:2,0:17:14.95:32,15,0	1/1:1,0:26:27.89:73,28,0	1/1:2,0:14:13.71:29,14,0	1/1:1,0:28:32.39:69,32,0	1/1:1,25:27:60.18:1147,60,0	1/1:1,0:22:24.92:54,25,0	1/1:2,0:23:23.54:51,24,0	0/1:3,0:10:4.10:4,0,29
chr10	9855795	.	AC	A	2420.66	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.876;DP=685;FS=1.429;HRun=6;HaplotypeScore=64.3103;InbreedingCoeff=0.9996;MQ=78.95;MQ0=1;MQRankSum=-4.419;QD=26.31;ReadPosRankSum=2.925;VQSLOD=4.1213;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,46:48:99:1257,117,0	0/0:11,0:11:30.08:0,30,378	0/0:20,0:20:51.16:0,51,655	0/0:20,0:20:45.07:0,45,530	1/1:0,23:23:69.09:726,69,0	0/0:26,0:26:75.22:0,75,958	0/0:27,0:27:69.22:0,69,907	0/0:31,0:31:90.28:0,90,1169	0/0:23,0:23:69.22:0,69,906	0/0:22,0:22:66.21:0,66,867	0/0:20,0:20:57.19:0,57,747	0/0:34,0:34:99:0,102,1339	0/0:23,0:23:66.19:0,66,837	0/0:17,0:17:51.17:0,51,670	0/0:31,0:31:90.28:0,90,1170	0/0:13,0:13:36.12:0,36,474	0/0:25,0:25:75.24:0,75,986	0/0:30,0:30:81.25:0,81,1050	0/0:27,0:27:69.21:0,69,880	0/0:29,0:29:87.27:0,87,1116	0/0:21,0:20:54.18:0,54,710	0/0:30,0:30:84.23:0,84,1050	0/0:19,0:19:57.17:0,57,735	0/0:30,0:30:81.25:0,81,1052	1/1:1,20:21:54.14:580,54,0	0/0:27,0:27:75.24:0,75,973	0/0:27,0:27:75.07:0,75,958	0/0:10,0:10:30:0,30,339
chr10	9856621	.	AACAC	A	1893.42	PASS	AB=0.892;AC=27;AF=0.643;AN=42;BaseQRankSum=-4.770;DP=515;FS=0.912;HRun=0;HaplotypeScore=109.3725;InbreedingCoeff=0.4549;MQ=72.60;MQ0=15;MQRankSum=1.593;QD=9.47;ReadPosRankSum=2.379;VQSLOD=2.9744;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:51:48.54:0,49,670	1/1:6,0:7:5.81:49,6,0	./.	./.	0/0:13,0:13:5.92:0,6,41	./.	./.	0/0:24,0:22:2.97:0,3,20	./.	0/0:11,0:10:5.75:0,6,80	1/1:9,1:9:9.70:126,10,0	1/1:12,0:13:8.69:116,9,0	1/1:8,1:9:9.03:137,9,0	1/1:7,2:9:6.02:93,6,0	1/1:12,0:12:8.94:109,9,0	1/1:11,2:12:15.03:211,15,0	0/1:23,7:28:33.83:374,0,34	1/1:14,2:16:13.37:197,13,0	./.	./.	0/0:15,0:15:5.69:0,6,74	1/1:6,3:8:7.84:87,8,0	0/1:10,1:11:2.49:55,0,2	1/1:24,1:25:1.17:44,1,0	0/0:19,0:18:21.24:0,21,278	0/1:18,1:18:13.23:178,0,13	1/1:8,2:10:12.51:173,13,0	1/1:3,2:5:6.02:94,6,0
chr10	9856656	.	ACACACG	A	736.90	PASS	AB=0.983;AC=20;AF=0.455;AN=44;BaseQRankSum=-2.310;DP=465;FS=13.615;HRun=0;HaplotypeScore=102.6866;InbreedingCoeff=-0.2143;MQ=37.97;MQ0=89;MQRankSum=1.752;QD=2.46;ReadPosRankSum=-3.358;VQSLOD=0.2441;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:45:15.83:0,16,610	1/1:9,0:8:8.71:82,9,0	./.	./.	1/1:11,0:8:3.27:28,3,0	./.	./.	0/1:17,0:2:0:0,0,0	1/1:4,0:2:2.96:19,3,0	0/0:18,1:10:5.47:0,5,143	0/1:16,0:11:2.58:56,0,3	0/1:17,0:13:5.97:83,0,6	0/1:15,0:14:32.44:67,0,32	0/1:15,0:10:13.75:14,0,48	0/1:13,0:11:9.24:9,0,32	0/1:20,0:15:0.35:0,0,71	0/1:34,0:31:76.14:76,0,158	0/1:23,0:21:40.65:129,0,41	./.	./.	0/0:15,0:6:7.25:0,7,98	0/1:27,0:17:4.20:4,0,23	0/1:12,0:12:0.55:36,0,1	0/0:33,0:27:0.93:0,1,22	0/1:29,0:20:18.24:18,0,345	0/1:15,7:18:92.35:154,0,92	0/1:14,0:13:33.26:88,0,33	0/0:5,0:3:3.25:0,3,9
chr10	9856660	.	ACG	A	643.64	PASS	AB=0.991;AC=22;AF=0.524;AN=42;BaseQRankSum=-0.924;DP=467;FS=20.526;HRun=0;HaplotypeScore=91.1569;InbreedingCoeff=-0.4223;MQ=37.84;MQ0=100;MQRankSum=1.680;QD=1.90;ReadPosRankSum=-2.542;VQSLOD=0.0561;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:46:9.91:0,10,315	1/1:8,0:7:7.87:49,8,0	./.	./.	0/1:12,0:8:13.63:22,0,14	./.	./.	./.	1/1:5,0:2:2.96:19,3,0	0/0:20,0:10:8.77:0,9,97	0/1:15,0:10:1.73:56,0,2	0/1:19,0:14:4.05:48,0,4	0/1:17,0:16:31.18:31,0,32	0/1:15,0:10:20.06:20,0,33	0/1:14,0:11:11.64:12,0,27	0/1:20,0:15:4.31:4,0,45	0/1:32,0:29:67.63:100,0,68	0/1:21,1:20:20.87:111,0,21	./.	./.	0/1:16,0:6:9.27:9,0,36	0/1:26,1:17:5.72:27,0,6	0/1:12,0:12:0.96:11,0,1	0/1:32,1:26:6.15:6,0,20	0/1:30,1:21:71.49:71,0,167	0/1:21,0:16:40.90:104,0,41	0/1:14,0:13:28.26:63,0,28	1/1:5,0:3:2.50:6,2,0
chr10	9856677	.	C	CCACA	2048.41	PASS	AB=0.926;AC=27;AF=0.643;AN=42;BaseQRankSum=-4.191;DP=487;FS=0.000;HRun=0;HaplotypeScore=114.4730;InbreedingCoeff=0.2041;MQ=38.20;MQ0=99;MQRankSum=-0.792;QD=6.17;ReadPosRankSum=1.033;VQSLOD=2.3440;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:48:36.33:0,36,329	0/1:6,0:5:0:0,0,0	./.	./.	0/0:8,0:7:3:0,3,28	./.	./.	./.	0/0:5,0:2:2.98:0,3,21	1/1:19,0:12:12.04:157,12,0	0/1:12,0:8:39.70:52,0,40	0/1:23,1:20:9.61:201,0,10	0/1:19,0:18:6.92:7,0,39	0/1:14,3:13:34.78:158,0,35	1/1:7,4:10:9.09:213,9,0	1/1:15,5:17:3.38:72,3,0	0/1:24,7:33:14.46:329,0,14	1/1:23,0:22:8.64:352,9,0	./.	./.	0/1:16,0:6:0:0,0,0	1/1:26,2:19:5.69:81,6,0	1/1:7,3:13:2.82:71,3,0	1/1:34,0:29:15:250,15,0	0/0:28,0:20:23.02:0,23,202	1/1:18,0:12:1.25:3,1,0	1/1:12,2:15:8.90:166,9,0	1/1:4,1:3:3.01:71,3,0
chr10	9856713	.	A	ACA	911.33	PASS	AB=0.970;AC=32;AF=0.696;AN=46;BaseQRankSum=0.808;DP=534;FS=0.000;HRun=0;HaplotypeScore=102.7503;InbreedingCoeff=0.2895;MQ=61.16;MQ0=16;MQRankSum=0.483;QD=2.41;ReadPosRankSum=-1.182;VQSLOD=1.9831;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:32:36.80:0,37,183	./.	1/1:24,0:16:2.60:10,3,0	./.	0/0:7,0:7:2.84:0,3,14	./.	1/1:17,0:15:0.47:1,0,0	./.	0/0:12,0:12:2.98:0,3,21	1/1:25,0:23:6.88:64,7,0	0/1:14,0:13:17.01:17,0,27	1/1:23,0:22:12.79:114,13,0	0/1:18,4:23:26.71:39,0,27	0/1:12,0:12:18.71:85,0,19	1/1:14,0:14:9.35:83,9,0	1/1:20,0:18:3.47:28,3,0	0/1:34,0:31:0.63:133,0,1	1/1:21,0:21:14.94:139,15,0	./.	0/1:26,0:25:0:0,0,0	0/1:19,0:16:0:0,0,0	1/1:20,0:19:6.01:69,6,0	1/1:16,0:16:3:27,3,0	1/1:31,0:26:13.26:141,13,0	0/0:18,0:16:22.39:0,22,105	1/1:20,0:17:1.72:4,2,0	1/1:11,0:11:8.79:64,9,0	1/1:8,0:8:3:27,3,0
chr10	9857557	.	CATCTATCTATCTATCT	C	12854.20	PASS	AB=0.896;AC=28;AF=0.538;AN=52;BaseQRankSum=8.603;DP=702;FS=16.437;HRun=0;HaplotypeScore=300.0409;InbreedingCoeff=0.8005;MQ=62.19;MQ0=1;MQRankSum=-5.855;QD=30.46;ReadPosRankSum=1.618;VQSLOD=2.3705;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:8.76:0,9,383	1/1:10,13:23:18.53:792,19,0	./.	./.	0/0:23,0:24:26.95:0,27,970	0/0:31,0:32:51.16:0,51,3124	0/0:19,0:19:30.10:0,30,1832	0/0:36,0:35:24.08:0,24,631	0/0:31,0:31:48.16:0,48,2557	1/1:17,26:43:75.04:1697,75,0	1/1:15,16:31:27.02:980,27,0	1/1:8,13:21:12.04:527,12,0	1/1:8,19:27:11.13:497,11,0	1/1:7,23:30:18.06:709,18,0	1/1:11,0:32:36.09:379,36,0	1/1:11,25:36:24.08:1054,24,0	0/1:12,2:14:51.15:233,0,51	0/1:10,1:11:8.37:203,0,8	0/0:16,0:15:21.05:0,21,1278	0/0:16,0:17:33.11:0,33,1985	0/0:18,0:18:36.12:0,36,2202	1/1:11,18:29:23.77:899,24,0	1/1:9,21:30:23.70:995,24,0	1/1:16,1:17:12.04:332,12,0	0/0:22,0:33:57.06:0,57,2383	1/1:14,20:34:57.05:1770,57,0	1/1:9,35:44:41.82:1790,42,0	0/0:3,0:3:3.01:0,3,95
chr10	9857618	.	CCGGT	C	172.22	PASS	AB=0.842;AC=5;AF=0.089;AN=56;BaseQRankSum=3.241;DP=712;FS=6.985;HRun=0;HaplotypeScore=208.9437;InbreedingCoeff=0.8338;MQ=57.91;MQ0=5;MQRankSum=-4.116;QD=3.66;ReadPosRankSum=-0.932;VQSLOD=1.9032;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:7,4:11:3.01:55,3,0	0/0:13,0:13:36.12:0,36,909	0/0:35,0:29:84.28:0,84,2189	0/0:25,0:18:48.03:0,48,1165	0/1:13,3:15:0.16:0,0,0	0/0:34,0:34:93.32:0,93,2548	0/0:27,0:27:72.19:0,72,1840	0/0:37,0:36:99:0,108,2849	0/0:19,0:19:54.19:0,54,1484	0/0:36,0:36:99:0,105,2799	0/0:23,0:23:60.21:0,60,1435	0/0:24,0:24:54.19:0,54,1502	0/0:29,0:29:72.25:0,72,1998	0/0:21,0:21:42.62:0,43,1115	0/0:34,0:34:81.28:0,81,2211	0/0:31,0:31:75.26:0,75,1975	0/0:25,0:25:59.45:0,59,1610	0/0:21,0:21:57.20:0,57,1580	0/0:22,0:22:66.23:0,66,1807	0/0:32,0:32:96.33:0,96,2684	0/0:24,0:24:57.20:0,57,1511	0/0:27,0:27:75.09:0,75,1904	0/0:23,0:23:42.14:0,42,923	0/0:22,1:23:50.94:0,51,1252	1/1:11,9:20:15.05:221,15,0	0/0:28,0:28:78.26:0,78,1982	0/0:36,0:36:72.25:0,72,1844	0/0:15,0:15:40.68:0,41,1150
chr10	9857682	.	T	TCTACCTAC	2906.02	PASS	AB=1.000;AC=18;AF=0.321;AN=56;BaseQRankSum=5.326;DP=794;FS=7.029;HRun=0;HaplotypeScore=188.9192;InbreedingCoeff=0.7749;MQ=54.38;MQ0=8;MQRankSum=-3.518;QD=9.17;ReadPosRankSum=-3.354;VQSLOD=1.2651;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:17:5.18:60,5,0	0/0:9,0:9:15.05:0,15,340	0/1:32,0:14:4.35:4,0,146	0/0:35,0:20:17.97:0,18,276	0/0:12,0:20:3.18:0,3,14	1/1:16,20:39:6.02:248,6,0	1/1:13,16:37:6.02:180,6,0	1/1:38,0:36:39:610,39,0	1/1:8,23:33:21.07:866,21,0	0/0:30,0:30:53.99:0,54,1047	0/0:21,0:21:42.11:0,42,905	0/0:27,0:27:60.16:0,60,1325	0/0:36,0:36:66.20:0,66,1475	0/0:24,0:24:63.13:0,63,1266	0/0:39,0:39:84.28:0,84,2046	0/0:33,0:33:72.23:0,72,1638	0/0:24,0:24:51.12:0,51,1015	0/0:34,0:34:42.64:0,43,1443	1/1:10,0:19:32.79:278,33,0	1/1:20,0:37:48.37:411,48,0	1/1:11,0:46:53.62:429,54,0	0/0:27,0:27:60.18:0,60,1336	0/0:21,0:21:45.15:0,45,1038	0/0:26,0:26:54.16:0,54,1211	0/1:9,0:17:16.23:16,0,22	0/0:31,0:31:72.23:0,72,1689	0/0:24,0:24:54.14:0,54,1142	0/0:16,0:15:27.04:0,27,448
chr10	9857718	.	T	TCTAC	2404.90	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=-0.962;DP=821;FS=11.663;HRun=0;HaplotypeScore=141.4281;InbreedingCoeff=0.8605;MQ=53.33;MQ0=12;MQRankSum=-2.988;QD=20.38;ReadPosRankSum=-1.292;VQSLOD=2.5735;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:13,9:22:45.15:1039,45,0	0/0:6,0:6:12.04:0,12,187	0/0:50,0:22:23.97:0,24,475	0/0:48,0:19:30.09:0,30,436	1/1:15,9:27:33.01:793,33,0	0/0:33,0:33:46.04:0,46,714	0/0:26,0:26:21.07:0,21,339	0/0:29,0:27:42.14:0,42,671	0/0:33,0:33:40.81:0,41,634	0/0:26,0:26:54.17:0,54,850	0/0:17,0:16:21.07:0,21,339	0/0:28,0:28:54.18:0,54,872	0/0:32,0:31:60.20:0,60,966	0/0:30,0:30:51.17:0,51,812	0/0:44,0:44:90.31:0,90,1449	0/0:36,0:36:75.25:0,75,1195	0/0:27,0:27:66.20:0,66,1029	0/0:37,0:37:48.27:0,48,982	0/0:18,0:17:36.12:0,36,572	0/0:29,0:29:66.22:0,66,1058	0/1:51,0:51:4.72:5,0,993	0/0:31,0:31:66.21:0,66,1030	0/0:21,0:21:42.14:0,42,672	0/0:24,0:24:45.15:0,45,721	1/1:11,6:18:30.10:713,30,0	0/0:35,0:35:60.20:0,60,966	0/0:35,0:35:84.29:0,84,1344	0/0:8,0:8:21.07:0,21,330
chr10	9861963	.	G	GT	3104.75	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=12.745;DP=766;FS=6.335;HRun=5;HaplotypeScore=77.1067;InbreedingCoeff=0.9954;MQ=80.69;MQ0=0;MQRankSum=-0.991;QD=33.03;ReadPosRankSum=1.720;VQSLOD=4.1951;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,45:46:99:1546,108,0	0/0:16,0:16:45.14:0,45,557	0/0:22,0:22:20.44:0,20,494	0/0:19,0:19:57.15:0,57,680	1/1:0,24:24:60.16:840,60,0	0/0:26,0:26:75.24:0,75,929	0/0:32,0:32:93.28:0,93,1138	0/0:27,0:27:81.25:0,81,1003	0/0:28,0:28:81.24:0,81,991	0/0:43,0:43:99:0,123,1484	0/0:14,0:14:39.09:0,39,457	0/0:28,0:28:81.25:0,81,1004	0/0:24,0:24:69.20:0,69,841	0/0:37,0:37:99:0,108,1324	0/0:26,0:26:75.24:0,75,929	0/0:29,0:29:81.25:0,81,1003	0/0:33,0:33:99:0,99,1214	0/0:27,0:27:81.25:0,81,1001	0/0:31,0:31:84.25:0,84,1024	0/0:23,0:23:69.22:0,69,855	0/0:51,0:51:99:0,141,1720	0/0:19,0:19:57.18:0,57,705	0/0:21,0:21:60.17:0,60,728	0/0:27,0:27:78.24:0,78,966	1/1:1,22:23:60.20:862,60,0	0/0:38,0:38:99:0,105,1301	0/0:25,0:25:72.10:0,72,857	0/0:6,0:6:18.04:0,18,210
chr10	9862357	.	AACTCAGTG	A	917.32	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.024;DP=811;FS=16.460;HRun=0;HaplotypeScore=197.9437;InbreedingCoeff=0.9998;MQ=77.14;MQ0=0;MQRankSum=6.106;QD=61.15;ReadPosRankSum=-1.993;VQSLOD=2.0462;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:69,0:69:99:0,208,8991	0/0:14,0:14:42.14:0,42,1648	1/1:0,15:15:38.77:1012,39,0	0/0:19,0:19:54.09:0,54,2001	0/0:29,0:29:84.25:0,84,3681	0/0:22,0:22:63.22:0,63,2789	0/0:32,0:32:96.33:0,96,4224	0/0:24,0:24:72.24:0,72,2719	0/0:34,0:34:99:0,102,4511	0/0:23,0:23:69.23:0,69,2983	0/0:19,0:19:51.18:0,51,2222	0/0:38,0:38:99:0,111,4886	0/0:27,0:27:78.27:0,78,3441	0/0:28,0:28:84.29:0,84,3683	0/0:36,0:36:99:0,108,4784	0/0:25,0:25:69.24:0,69,3037	0/0:58,0:58:99:0,172,7354	0/0:26,0:26:69.24:0,69,3107	0/0:23,0:23:69.21:0,69,2762	0/0:13,0:13:39.13:0,39,1609	0/0:40,0:39:99:0,117,5136	0/0:38,0:38:99:0,114,4953	0/0:27,0:27:81.28:0,81,3636	0/0:40,0:40:99:0,117,5153	0/0:30,0:30:87.28:0,87,3728	0/0:22,0:22:66.23:0,66,2868	0/0:25,0:25:75.24:0,75,3003	0/0:15,0:15:42.14:0,42,1900
chr10	9864762	.	CTAACCCTGCA	C	23013.27	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=14.150;DP=659;FS=9.774;HRun=0;HaplotypeScore=218.3581;InbreedingCoeff=0.9955;MQ=90.86;MQ0=0;MQRankSum=-18.943;QD=76.20;ReadPosRankSum=4.858;VQSLOD=3.5528;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,123,6412	1/1:1,9:10:24.08:800,24,0	0/0:31,0:31:60.48:0,60,3823	0/0:31,0:31:85.14:0,85,3934	0/0:34,0:34:99:0,102,4766	0/0:28,0:28:81.28:0,81,4172	0/0:29,0:29:81.27:0,81,3825	0/0:29,0:29:84.29:0,84,4105	0/0:28,0:28:78.27:0,78,4010	1/1:1,20:21:60.21:1841,60,0	1/1:1,13:14:24.08:689,24,0	1/1:1,24:25:60.21:2000,60,0	1/1:0,22:22:42.14:1400,42,0	1/1:0,19:19:45.15:1500,45,0	1/1:0,23:23:63.22:2100,63,0	1/1:0,27:27:57.20:1900,57,0	1/1:0,19:19:39.13:1300,39,0	1/1:2,12:14:18.06:600,18,0	0/0:19,0:19:57.15:0,57,2778	0/0:34,0:34:96.33:0,96,5033	0/0:29,0:29:84.29:0,84,4288	1/1:1,21:22:45.15:1500,45,0	1/1:2,24:26:69.24:2299,69,0	1/1:0,12:12:21.07:700,21,0	0/0:23,0:23:69.24:0,69,3567	1/1:0,19:19:57.19:1684,57,0	1/1:0,22:22:66.23:2200,66,0	1/1:0,7:7:15.05:500,15,0
chr10	9865437	.	AGTGTGTGTGTGTGT	A	4065.28	PASS	AB=1.000;AC=27;AF=0.540;AN=50;BaseQRankSum=5.536;DP=517;FS=2.574;HRun=0;HaplotypeScore=184.3256;InbreedingCoeff=0.6760;MQ=66.67;MQ0=12;MQRankSum=-5.875;QD=18.07;ReadPosRankSum=2.343;VQSLOD=2.6754;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:21.03:0,21,340	1/1:5,0:5:2.37:8,2,0	./.	./.	0/0:12,0:19:12.01:0,12,193	0/0:15,0:15:11.73:0,12,716	0/0:38,0:36:39.13:0,39,1903	0/0:31,0:31:15.02:0,15,397	0/0:16,0:16:14.39:0,14,840	0/1:17,0:16:18.95:19,0,26	1/1:14,5:18:3.48:106,3,0	1/1:11,7:18:15.05:491,15,0	1/1:8,8:16:12.04:444,12,0	1/1:9,5:14:9.03:331,9,0	1/1:13,8:22:15.05:463,15,0	1/1:9,2:11:3.01:117,3,0	1/1:18,10:27:10.34:463,10,0	0/0:19,0:17:0:0,0,0	0/0:16,0:16:16.30:0,16,680	0/0:17,0:17:12.03:0,12,334	0/0:27,0:27:15.01:0,15,445	1/1:7,5:12:9.03:306,9,0	1/1:12,1:14:6.01:202,6,0	./.	0/0:13,0:12:15.04:0,15,320	1/1:21,0:20:1.04:97,1,0	1/1:16,9:24:23.78:921,24,0	1/1:0,0:1:3.01:98,3,0
chr10	9866377	.	AGGAGATGAGGACTG	A	5153.83	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=11.111;DP=829;FS=4.382;HRun=0;HaplotypeScore=344.7689;InbreedingCoeff=0.9942;MQ=86.77;MQ0=0;MQRankSum=-10.498;QD=72.59;ReadPosRankSum=-1.505;VQSLOD=3.2788;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,21:32:45.11:1666,45,0	0/0:11,0:11:33.11:0,33,2199	0/0:34,0:34:80.41:0,80,4557	0/0:30,0:28:83.24:0,83,3897	1/1:6,17:23:54.14:1862,54,0	0/0:28,0:28:72.20:0,72,4352	0/0:47,0:47:99:0,132,8453	0/0:32,0:32:87.26:0,87,4766	0/0:31,0:31:93.27:0,93,5750	0/0:28,0:28:84.28:0,84,5384	0/0:25,0:25:72.25:0,72,4607	0/0:24,0:24:69.24:0,69,4531	0/0:29,0:29:81.26:0,81,5007	0/0:31,0:31:93.32:0,93,6305	0/0:19,0:19:57.18:0,57,3683	0/0:29,0:29:84.29:0,84,5681	0/0:56,0:56:99:0,166,10465	0/0:29,0:29:84.29:0,84,5462	0/0:37,0:37:99:0,99,6310	0/0:44,0:44:99:0,126,8384	0/0:27,0:27:66.23:0,66,4099	0/0:31,0:31:84.26:0,84,5358	0/0:26,0:26:78.27:0,78,5105	0/0:62,0:62:99:0,169,11276	1/1:1,15:16:39.13:1625,39,0	0/0:25,0:25:72.23:0,72,4210	0/0:18,0:18:54.19:0,54,3627	0/0:5,0:5:15.01:0,15,842
chr10	9866698	.	G	GAGAT	3863.46	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-1.921;DP=632;FS=13.276;HRun=0;HaplotypeScore=201.0645;InbreedingCoeff=0.9789;MQ=68.57;MQ0=0;MQRankSum=-11.213;QD=52.92;ReadPosRankSum=-1.653;VQSLOD=3.0705;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,13:25:50.26:1151,50,0	0/0:6,0:6:12.04:0,12,158	0/0:22,0:19:22.21:0,22,715	0/0:31,0:28:69.37:0,69,1120	1/1:1,21:24:54.19:1399,54,0	0/0:27,0:27:69.10:0,69,817	0/0:22,0:22:54.99:0,55,704	0/0:28,0:28:70.08:0,70,948	0/0:15,0:15:13.45:0,13,471	0/0:29,0:29:84.14:0,84,1135	0/0:14,0:14:36.06:0,36,494	0/0:30,0:30:75.23:0,75,990	0/0:26,0:26:75.23:0,75,1023	0/0:19,0:19:36.12:0,36,487	0/0:19,0:19:54.16:0,54,733	0/0:27,0:27:77.74:0,78,1023	0/0:28,0:28:69.20:0,69,891	0/0:17,0:17:45.15:0,45,610	0/0:22,0:22:60.20:0,60,1105	0/0:26,0:26:66.23:0,66,1231	0/0:19,0:19:57.15:0,57,1014	0/0:24,0:23:57.12:0,57,737	0/0:13,0:13:36.09:0,36,482	0/0:22,0:22:63.20:0,63,861	1/1:3,19:24:51.18:1314,51,0	0/0:31,0:31:90.25:0,90,1234	0/0:27,0:26:72.16:0,72,899	0/0:15,0:15:22.28:0,22,251
chr10	9866703	.	A	AG	12916.07	PASS	AB=1.000;AC=43;AF=0.768;AN=56;BaseQRankSum=-7.043;DP=654;FS=24.816;HRun=4;HaplotypeScore=133.4531;InbreedingCoeff=0.7454;MQ=68.35;MQ0=0;MQRankSum=-0.132;QD=24.51;ReadPosRankSum=3.745;VQSLOD=3.0799;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:23:2.43:24,0,2	1/1:1,5:6:15:175,15,0	0/0:24,0:21:49.85:0,50,514	0/0:30,0:28:60.76:0,61,659	0/1:24,0:24:8.45:25,0,8	1/1:3,24:27:64.76:825,65,0	1/1:2,21:23:45.14:588,45,0	1/1:16,18:36:57.16:708,57,0	1/1:1,15:16:38.79:478,39,0	1/1:3,27:30:75.95:926,76,0	1/1:2,11:13:24.93:287,25,0	1/1:1,28:29:73.12:933,73,0	1/1:8,17:26:68.78:828,69,0	1/1:1,16:17:36.05:448,36,0	1/1:4,15:19:42.14:542,42,0	1/1:1,27:28:75.72:976,76,0	1/1:1,25:26:60.19:780,60,0	1/1:1,16:17:42.14:546,42,0	0/0:23,0:23:31.96:0,32,254	0/0:29,0:29:42.44:0,42,355	0/0:20,0:20:57.69:0,58,305	1/1:0,25:24:60.02:722,60,0	1/1:3,12:15:28.71:353,29,0	1/1:2,20:22:54.18:701,54,0	0/1:26,0:26:0.98:32,0,1	1/1:6,27:33:71.81:987,72,0	1/1:4,23:26:60.19:783,60,0	1/1:6,13:19:2.32:248,2,0
chr10	9867762	.	A	AT	13722.90	PASS	AB=1.000;AC=47;AF=0.839;AN=56;BaseQRankSum=-10.255;DP=546;FS=2.236;HRun=7;HaplotypeScore=48.0093;InbreedingCoeff=0.8712;MQ=79.44;MQ0=0;MQRankSum=-2.350;QD=29.58;ReadPosRankSum=3.761;VQSLOD=5.1661;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,24:26:69.21:834,69,0	1/1:0,3:3:9.03:109,9,0	0/0:21,0:21:37.97:0,38,351	0/1:9,0:10:8.58:9,0,67	1/1:1,21:23:66.20:787,66,0	1/1:4,16:20:48.15:580,48,0	1/1:4,11:15:30.09:362,30,0	1/1:11,27:39:87.09:1002,87,0	1/1:4,16:20:45.14:544,45,0	1/1:1,22:23:66.20:797,66,0	1/1:0,17:17:45.14:544,45,0	1/1:5,10:15:27.08:326,27,0	1/1:2,19:21:54.17:652,54,0	1/1:5,20:25:60.18:719,60,0	1/1:0,19:19:51.16:616,51,0	1/1:2,17:19:48.15:580,48,0	1/1:1,23:24:60.18:725,60,0	1/1:2,15:18:39.09:456,39,0	0/0:15,0:15:36.04:0,36,348	0/0:23,0:23:60.09:0,60,579	0/0:22,0:22:60.09:0,60,579	1/1:0,16:16:48.15:580,48,0	1/1:2,19:21:51.63:617,52,0	1/1:2,15:17:42.13:507,42,0	1/1:2,23:25:69.21:834,69,0	1/1:1,15:16:45.14:544,45,0	1/1:1,17:19:48.13:567,48,0	1/1:2,11:13:36.11:432,36,0
chr10	9868949	.	ATCTCTC	A	418.93	PASS	AB=0.925;AC=19;AF=0.432;AN=44;BaseQRankSum=0.818;DP=531;FS=14.518;HRun=0;HaplotypeScore=108.7824;InbreedingCoeff=0.3153;MQ=70.54;MQ0=17;MQRankSum=-0.273;QD=2.31;ReadPosRankSum=1.956;VQSLOD=1.1949;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:18,1:18:5.05:36,5,0	1/1:13,1:14:3.01:59,3,0	./.	0/0:42,0:22:0:0,0,0	./.	1/1:19,2:21:2.99:23,3,0	0/0:14,0:14:2.03:0,2,5	0/0:38,0:38:5.92:0,6,33	1/1:10,1:11:3.01:60,3,0	0/0:19,0:18:1.55:0,2,4	./.	0/0:17,0:17:3.01:0,3,96	0/0:19,0:19:2.48:0,2,156	0/0:16,0:15:3.01:0,3,42	0/0:17,0:18:3.01:0,3,37	0/1:18,1:20:83.55:84,0,146	0/0:24,0:23:16.30:0,16,215	0/0:13,0:11:6.02:0,6,135	1/1:16,2:17:9.03:173,9,0	1/1:14,0:14:3.01:47,3,0	./.	1/1:16,0:16:2.97:20,3,0	1/1:11,0:11:3.01:37,3,0	0/1:23,0:21:7.02:7,0,126	./.	0/0:11,0:11:6.02:0,6,79	0/1:11,2:11:0.13:0,0,0	./.
chr10	9869005	.	CGT	C	672.09	PASS	AB=0.954;AC=26;AF=0.591;AN=44;BaseQRankSum=-2.057;DP=494;FS=6.715;HRun=0;HaplotypeScore=85.3452;InbreedingCoeff=0.4259;MQ=30.07;MQ0=132;MQRankSum=2.256;QD=2.64;ReadPosRankSum=0.865;VQSLOD=1.0843;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:18:0:0,0,0	1/1:5,0:3:2.84:14,3,0	./.	./.	0/1:15,0:13:0.20:0,0,0	0/0:11,0:11:0:0,0,0	0/1:29,0:21:0.41:0,0,1	./.	1/1:15,0:14:2.20:13,2,0	1/1:17,0:12:6.89:58,7,0	0/0:8,3:9:0:0,0,0	1/1:11,0:9:11.05:93,11,0	1/1:17,1:17:2.57:30,3,0	./.	1/1:22,1:18:5.85:45,6,0	./.	0/0:34,0:24:12.73:0,13,102	1/1:17,0:11:2.65:88,3,0	./.	1/1:12,0:12:0.18:1,0,0	0/0:29,0:12:0:0,0,0	0/0:13,3:12:0:0,0,0	1/1:17,0:15:12.02:116,12,0	1/1:31,1:24:8.82:80,9,0	0/0:17,0:14:0.47:0,0,1	1/1:17,0:16:16.59:104,17,0	1/1:17,0:13:14.66:123,15,0	0/0:24,0:7:0.91:0,1,3
chr10	9869545	.	C	CT	3095.12	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-10.233;DP=736;FS=2.626;HRun=2;HaplotypeScore=69.1625;InbreedingCoeff=0.9794;MQ=87.02;MQ0=0;MQRankSum=-2.822;QD=37.75;ReadPosRankSum=0.990;VQSLOD=4.3485;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,147,1734	0/0:11,0:11:30.09:0,30,361	0/0:28,0:28:78.20:0,78,911	0/0:21,0:21:57.17:0,57,686	0/0:27,0:27:81.25:0,81,992	0/0:28,0:28:84.24:0,84,1006	0/0:35,0:35:99:0,105,1288	0/0:28,0:28:78.22:0,78,944	0/0:23,0:23:69.22:0,69,855	0/0:20,0:20:60.02:0,60,719	0/0:26,0:26:78.23:0,78,948	0/0:30,0:30:90.27:0,90,1104	0/0:34,0:34:99:0,99,1196	0/0:28,0:28:78.23:0,78,954	0/0:43,0:43:99:0,123,1501	0/0:22,0:22:57.17:0,57,694	0/0:35,0:35:96.28:0,96,1175	0/0:21,0:20:57.18:0,57,706	1/1:2,15:17:48.11:632,48,0	1/1:1,25:26:75.20:1052,75,0	1/1:2,37:39:99:1554,108,0	0/0:23,0:23:63.06:0,63,756	0/0:24,0:24:69.22:0,69,852	0/0:38,0:38:99:0,105,1299	0/0:17,0:17:48.15:0,48,595	0/0:18,0:18:54.17:0,54,665	0/0:22,0:22:57.15:0,57,680	0/0:3,0:3:9.03:0,9,112
chr10	9869920	.	A	ATATG	977.80	PASS	AB=0.733;AC=7;AF=0.125;AN=56;BaseQRankSum=6.038;DP=595;FS=6.952;HRun=0;HaplotypeScore=150.0384;InbreedingCoeff=0.7875;MQ=58.42;MQ0=15;MQRankSum=-5.979;QD=18.45;ReadPosRankSum=-2.923;VQSLOD=2.4391;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:75.33:0,75,1505	0/0:5,0:5:9.03:0,9,189	0/0:30,0:15:45.12:0,45,849	0/0:36,0:20:60.21:0,60,1217	0/0:19,0:19:38.20:0,38,844	1/1:17,0:17:6.24:75,6,0	1/1:10,0:10:3.01:41,3,0	1/1:13,2:15:45.14:919,45,0	0/1:7,3:11:2.51:74,0,3	0/0:23,0:22:63.21:0,63,1263	0/0:18,0:18:36.10:0,36,748	0/0:26,0:25:66.21:0,66,1327	0/0:27,0:27:60.17:0,60,1155	0/0:20,0:20:42.14:0,42,878	0/0:22,0:22:63.20:0,63,1282	0/0:22,0:22:54.17:0,54,1092	0/0:29,0:29:75.25:0,75,1467	0/0:29,0:27:75:0,75,1448	0/0:15,0:14:36.09:0,36,647	0/0:20,0:20:27.56:0,28,533	0/0:28,0:27:51.04:0,51,1015	0/0:18,0:18:38.97:0,39,748	0/0:16,0:16:39.13:0,39,791	0/0:31,0:31:74.47:0,74,1483	0/0:17,0:17:37.94:0,38,740	0/0:30,0:28:75.24:0,75,1482	0/0:19,0:19:33.06:0,33,614	0/0:6,0:6:18.04:0,18,319
chr10	9869922	.	A	ATG	612.12	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=7.765;DP=598;FS=4.071;HRun=0;HaplotypeScore=132.6733;InbreedingCoeff=0.8781;MQ=58.05;MQ0=16;MQRankSum=-7.041;QD=12.00;ReadPosRankSum=-1.913;VQSLOD=2.8687;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:75.46:0,75,1162	0/0:6,0:6:9.03:0,9,147	0/0:29,0:14:39.13:0,39,621	0/0:36,0:20:60.19:0,60,934	0/0:19,0:19:32.98:0,33,672	1/1:1,15:17:5.50:69,6,0	1/1:0,10:10:3.01:46,3,0	1/1:0,13:13:39.13:574,39,0	1/1:7,4:11:9.32:61,9,0	0/0:22,0:21:63.21:0,63,997	0/0:19,0:19:37.98:0,38,641	0/0:25,0:24:66.22:0,66,1066	0/0:25,0:25:54.14:0,54,848	0/0:20,0:20:42.14:0,42,675	0/0:22,0:22:60.20:0,60,974	0/0:22,0:22:51.17:0,51,826	0/0:30,0:30:78.17:0,78,1148	0/0:32,0:30:72.71:0,73,1130	0/0:14,0:13:30.10:0,30,470	0/0:21,0:21:27.52:0,28,399	0/0:28,0:27:51.09:0,51,796	0/0:18,0:17:36.12:0,36,567	0/0:17,0:17:39.12:0,39,599	0/0:32,0:32:76.84:0,77,1177	0/0:17,0:17:37.37:0,37,588	0/0:31,0:29:67.36:0,67,1186	0/0:20,0:20:33.11:0,33,505	0/0:6,0:6:17.99:0,18,247
chr10	9869930	.	ACG	A	399.04	PASS	AB=0.962;AC=12;AF=0.214;AN=56;BaseQRankSum=5.757;DP=610;FS=1.915;HRun=0;HaplotypeScore=138.0819;InbreedingCoeff=0.4887;MQ=53.84;MQ0=18;MQRankSum=-2.586;QD=2.38;ReadPosRankSum=-4.685;VQSLOD=0.5540;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:34,1:35:4.16:4,0,826	0/0:6,0:6:9.03:0,9,172	0/0:25,0:9:3.97:0,4,187	0/1:33,0:16:21.64:22,0,400	0/0:23,0:23:47.49:0,47,619	1/1:24,0:24:10.99:81,11,0	1/1:16,0:16:7.96:56,8,0	1/1:18,0:16:35:237,35,0	1/1:14,1:15:1.85:112,2,0	0/0:22,0:21:62.79:0,63,942	0/0:20,0:20:43.95:0,44,493	0/0:23,0:22:45.12:0,45,902	0/0:23,0:23:51.04:0,51,728	0/0:20,0:20:33.09:0,33,566	0/0:23,0:23:60.17:0,60,1053	0/0:21,0:21:48.06:0,48,785	0/0:28,0:28:63.66:0,64,975	0/0:30,0:28:28.46:0,28,970	0/0:14,0:13:18.93:0,19,86	0/1:20,0:20:34.66:35,0,55	0/0:28,0:27:46.22:0,46,367	0/0:16,0:15:25.54:0,26,350	0/0:17,0:17:35.01:0,35,582	0/0:32,1:33:28.42:0,28,1014	0/0:20,0:20:14.85:0,15,422	0/0:28,0:26:32.91:0,33,931	0/0:22,0:22:24.04:0,24,450	0/1:6,1:7:8.66:9,0,125
chr10	9869934	.	ACACACACACACG	A	1417.03	PASS	AB=0.912;AC=13;AF=0.232;AN=56;BaseQRankSum=1.595;DP=644;FS=14.843;HRun=0;HaplotypeScore=231.8227;InbreedingCoeff=0.3496;MQ=51.33;MQ0=20;MQRankSum=-2.473;QD=7.16;ReadPosRankSum=-4.952;VQSLOD=-0.2506;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:35.25:0,35,1166	0/0:6,0:6:12.04:0,12,501	0/1:23,0:5:21.14:28,0,21	0/1:31,0:14:9.73:10,0,79	0/0:24,0:24:23:0,23,555	0/0:28,0:29:3.43:0,3,69	1/1:25,0:25:1.12:58,1,0	1/1:24,0:22:6.70:161,7,0	0/1:23,0:23:66.16:66,0,150	0/0:25,0:24:17.95:0,18,1773	0/0:19,0:19:34.03:0,34,1075	0/0:25,0:24:47.68:0,48,1775	0/0:21,0:21:32.73:0,33,1032	0/0:19,0:19:27.03:0,27,1107	0/0:25,0:25:50.01:0,50,1498	0/0:21,0:21:35.92:0,36,1140	0/0:30,0:30:45.43:0,45,2467	0/0:28,0:26:56.90:0,57,2254	1/1:2,12:13:31.49:384,31,0	0/1:5,18:23:29.85:549,0,30	1/1:30,0:28:2.69:308,3,0	0/0:17,0:16:27.65:0,28,703	0/0:16,0:16:31.97:0,32,1142	0/0:32,0:32:44.42:0,44,2049	0/0:21,0:21:20.01:0,20,395	0/0:29,0:27:8.47:0,8,2180	0/0:24,0:24:31.57:0,32,684	0/1:5,0:5:8.38:8,0,456
chr10	9872061	.	GGACA	G	13567.92	PASS	AB=0.542;AC=25;AF=0.446;AN=56;BaseQRankSum=18.482;DP=692;FS=5.456;HRun=0;HaplotypeScore=129.2351;InbreedingCoeff=0.9379;MQ=91.98;MQ0=0;MQRankSum=-5.948;QD=51.79;ReadPosRankSum=5.610;VQSLOD=5.8200;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,135,3628	1/1:2,8:10:24.08:479,24,0	0/0:39,0:39:99:0,114,2821	0/0:22,0:22:60.17:0,60,1456	0/0:20,0:20:57.20:0,57,1534	0/0:23,0:23:66.22:0,66,1791	0/0:30,0:30:90.31:0,90,2410	0/0:31,0:31:90.30:0,90,2289	0/0:31,0:31:93.32:0,93,2440	1/1:3,22:25:69.22:1342,69,0	1/1:2,14:16:30.06:559,30,0	1/1:3,17:20:48.12:918,48,0	1/1:2,24:26:69.19:1316,69,0	1/1:2,24:26:66.23:1308,66,0	1/1:0,19:19:57.20:1138,57,0	0/1:4,22:26:6.74:1322,0,7	1/1:0,29:29:78.27:1558,78,0	1/1:1,22:23:63.22:1258,63,0	0/0:26,0:26:72.25:0,72,1942	0/0:16,0:16:45.15:0,45,1228	0/0:45,0:45:99:0,120,3255	0/0:32,0:32:93.32:0,93,2539	0/0:19,0:19:57.18:0,57,1491	0/0:31,0:31:87.28:0,87,2245	0/0:18,0:18:54.19:0,54,1431	1/1:2,15:17:48.16:933,48,0	1/1:0,20:20:56.89:1135,57,0	1/1:0,5:5:15.05:299,15,0
chr10	9872062	.	GACA	G	6734.38	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=20.731;DP=685;FS=4.349;HRun=0;HaplotypeScore=137.5838;InbreedingCoeff=0.9774;MQ=92.43;MQ0=0;MQRankSum=-5.855;QD=26.83;ReadPosRankSum=5.989;VQSLOD=4.8996;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,138,3234	1/1:8,1:9:24.04:235,24,0	0/0:40,0:40:99:0,117,2614	0/0:21,0:21:60.17:0,60,1304	0/0:20,0:20:57.20:0,57,1344	0/0:22,0:22:66.23:0,66,1554	0/0:32,0:32:96.33:0,96,2252	0/0:32,0:32:93.31:0,93,2120	0/0:31,0:31:93.32:0,93,2154	1/1:22,2:24:69.11:672,69,0	1/1:14,1:15:30.01:284,30,0	1/1:17,1:18:48.04:460,48,0	1/1:25,0:25:69.08:674,69,0	1/1:24,0:24:66.11:667,66,0	1/1:19,0:19:57.09:557,57,0	1/1:23,2:25:4.12:623,4,0	1/1:29,0:29:78.13:762,78,0	1/1:22,0:22:63.11:626,63,0	0/0:25,0:25:72.25:0,72,1689	0/0:17,0:17:48.16:0,48,1136	0/0:45,0:45:99:0,126,2978	0/0:32,0:32:93.32:0,93,2198	0/0:19,0:19:57.18:0,57,1305	0/0:32,0:32:90.29:0,90,2047	0/0:19,0:19:57.20:0,57,1326	1/1:15,1:16:48.08:474,48,0	1/1:20,0:20:56.78:554,57,0	1/1:5,0:5:15.02:146,15,0
chr10	9873765	.	CGTGTGTGTGTGT	C	1286.85	PASS	AB=0.873;AC=20;AF=0.455;AN=44;BaseQRankSum=4.637;DP=636;FS=2.823;HRun=0;HaplotypeScore=194.9530;InbreedingCoeff=0.5341;MQ=58.48;MQ0=14;MQRankSum=-3.740;QD=4.84;ReadPosRankSum=1.912;VQSLOD=2.6690;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:42,0:45:3.01:81,3,0	./.	./.	./.	0/1:14,0:14:0:0,0,0	0/0:20,0:20:17.07:0,17,313	0/0:25,0:25:0.37:0,0,39	0/0:25,0:24:2.84:0,3,9	0/0:19,0:23:6.44:0,6,136	0/0:20,0:19:0:0,0,0	./.	1/1:22,0:23:2.95:64,3,0	1/1:19,1:21:6.02:186,6,0	1/1:15,1:15:2.71:102,3,0	0/1:20,3:23:0:0,0,0	1/1:19,2:21:2.94:75,3,0	1/1:20,4:26:14.83:433,15,0	1/1:15,0:15:9.03:167,9,0	0/0:17,0:16:11.83:0,12,216	0/0:16,0:17:9.20:0,9,179	0/0:67,0:66:31.33:0,31,686	./.	0/0:16,0:16:3.01:0,3,41	1/1:32,0:41:5.62:79,6,0	1/1:13,0:18:9.03:239,9,0	0/0:20,0:20:4.83:0,5,105	0/0:11,0:11:3.01:0,3,112	./.
chr10	9873767	.	T	TAC	665.97	PASS	AB=0.543;AC=5;AF=0.089;AN=56;BaseQRankSum=1.846;DP=638;FS=4.555;HRun=0;HaplotypeScore=116.8325;InbreedingCoeff=0.8163;MQ=55.19;MQ0=18;MQRankSum=-0.936;QD=8.76;ReadPosRankSum=-0.217;VQSLOD=3.2672;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:7,37:44:6.25:26,0,6	0/0:15,0:15:36.11:0,36,517	0/0:18,0:12:36.12:0,36,560	0/0:32,0:13:29.83:0,30,411	1/1:15,0:13:20.92:302,21,0	0/0:19,0:19:45.39:0,45,645	0/0:26,0:25:53.45:0,53,795	0/0:27,0:25:56.70:0,57,713	0/0:22,0:22:50.50:0,50,757	0/0:20,0:19:51.17:0,51,767	0/0:12,0:11:18.06:0,18,267	0/0:22,0:22:48:0,48,669	0/0:22,0:22:60.18:0,60,851	0/0:16,0:15:30.09:0,30,421	0/0:27,0:26:45.10:0,45,655	0/0:21,0:21:14.96:0,15,603	0/0:27,0:25:60.13:0,60,765	0/0:13,0:13:33.06:0,33,425	0/0:21,0:20:42.14:0,42,565	0/0:18,0:18:26.37:0,26,405	0/0:71,0:69:99:0,142,2015	0/0:17,0:17:36.10:0,36,521	0/0:16,0:16:33.09:0,33,468	0/0:40,0:40:77.73:0,78,1126	1/1:17,0:17:33.06:467,33,0	0/0:20,0:19:47.58:0,48,652	0/0:11,0:11:30.09:0,30,409	0/0:9,0:9:24.08:0,24,356
chr10	9876303	.	G	GCA	4231.04	PASS	AB=0.668;AC=30;AF=0.536;AN=56;BaseQRankSum=5.685;DP=667;FS=0.000;HRun=0;HaplotypeScore=132.9807;InbreedingCoeff=0.7467;MQ=46.31;MQ0=17;MQRankSum=-2.594;QD=14.59;ReadPosRankSum=3.593;VQSLOD=4.2798;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:27:45.14:0,45,565	1/1:4,4:6:5.98:70,6,0	0/0:39,0:11:21.82:0,22,235	0/0:42,0:12:29.80:0,30,305	0/0:32,0:32:36.12:0,36,453	0/0:25,0:25:43.25:0,43,506	0/0:31,0:31:51.16:0,51,642	0/0:25,0:21:39.04:0,39,427	0/0:24,0:21:29.83:0,30,354	0/1:11,8:15:19.21:372,0,19	1/1:12,2:14:6.17:140,6,0	1/1:3,21:22:30.57:498,31,0	1/1:11,10:19:24.08:384,24,0	0/1:13,18:26:20.12:229,0,20	1/1:6,16:20:15.05:248,15,0	1/1:10,17:22:8.09:149,8,0	1/1:15,11:22:30.03:392,30,0	1/1:4,5:6:6.02:100,6,0	0/0:27,0:27:66.05:0,66,751	0/0:21,0:21:54.11:0,54,645	0/0:60,0:60:99:0,141,1675	1/1:7,10:17:15.05:247,15,0	1/1:3,4:8:3.01:50,3,0	1/1:10,12:21:12.04:199,12,0	0/0:22,0:20:38.98:0,39,479	1/1:6,14:17:47.73:656,48,0	1/1:8,13:17:14.40:449,14,0	1/1:0,1:1:3.01:50,3,0
chr10	9876316	.	T	TAC	560.76	PASS	AB=0.990;AC=27;AF=0.482;AN=56;BaseQRankSum=11.119;DP=695;FS=4.509;HRun=0;HaplotypeScore=149.6095;InbreedingCoeff=0.5179;MQ=42.86;MQ0=36;MQRankSum=-5.375;QD=1.97;ReadPosRankSum=2.065;VQSLOD=1.9086;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:24:36.12:0,36,514	1/1:8,0:6:0.46:1,0,0	0/0:56,0:13:25.90:0,26,336	0/0:60,1:16:34.63:0,35,425	0/0:27,0:27:33.08:0,33,450	0/0:25,0:25:38.64:0,39,538	0/0:27,0:25:54.11:0,54,725	0/0:25,0:22:63.20:0,63,867	0/0:27,0:22:32.53:0,33,425	0/1:20,0:15:68.63:69,0,107	0/1:12,0:12:10.05:10,0,14	1/1:29,1:24:16.42:85,16,0	1/1:17,0:16:13.76:101,14,0	0/1:29,0:25:24.47:24,0,33	1/1:27,0:23:2.16:6,2,0	1/1:25,0:20:6.43:29,6,0	1/1:18,1:17:22.25:174,22,0	1/1:6,0:4:1.34:5,1,0	0/0:33,0:29:78.25:0,78,1075	0/0:19,0:19:54.18:0,54,767	0/0:63,0:62:99:0,150,2075	1/1:17,0:15:2.42:13,2,0	0/1:6,0:6:0.19:0,0,0	1/1:22,1:20:2.30:4,2,0	0/0:22,0:20:32.98:0,33,469	0/1:19,1:19:47.17:142,0,47	1/1:25,0:19:13.10:63,13,0	1/1:1,0:1:2.74:12,3,0
chr10	9876324	.	T	TACACATACAC	3592.45	PASS	AB=0.850;AC=27;AF=0.500;AN=54;BaseQRankSum=10.561;DP=714;FS=0.542;HRun=0;HaplotypeScore=199.9789;InbreedingCoeff=0.7571;MQ=41.87;MQ0=38;MQRankSum=-4.287;QD=12.83;ReadPosRankSum=1.613;VQSLOD=2.5847;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:20:12.01:0,12,164	1/1:4,3:5:2.98:49,3,0	0/0:53,0:13:11.10:0,11,189	0/0:61,0:12:14.26:0,14,197	0/0:26,0:26:14.77:0,15,214	0/0:28,0:27:7.70:0,8,122	0/0:26,0:23:18.01:0,18,218	0/0:30,0:26:54.10:0,54,746	0/0:26,0:20:10.59:0,11,171	0/1:14,3:13:34.93:443,0,35	1/1:5,5:10:6.02:83,6,0	1/1:27,4:25:20.96:341,21,0	1/1:17,3:16:14.81:333,15,0	1/1:21,8:25:8.81:119,9,0	1/1:23,5:24:15:213,15,0	1/1:18,7:20:12.57:86,13,0	1/1:20,0:18:15:233,15,0	./.	0/0:39,0:30:62.85:0,63,1600	0/0:20,0:20:45.04:0,45,953	0/0:65,0:64:99:0,102,2387	1/1:17,1:15:11.97:123,12,0	0/0:7,1:7:0.47:0,0,1	1/1:26,1:24:5.98:48,6,0	0/0:24,0:22:9.62:0,10,173	1/1:20,1:19:39.31:782,39,0	1/1:18,5:19:23.91:717,24,0	1/1:4,0:4:2.97:20,3,0
chr10	9876340	.	TACAC	T	729.87	PASS	AB=0.963;AC=22;AF=0.393;AN=56;BaseQRankSum=5.769;DP=743;FS=4.098;HRun=0;HaplotypeScore=161.6411;InbreedingCoeff=0.3166;MQ=38.74;MQ0=38;MQRankSum=0.588;QD=2.38;ReadPosRankSum=-0.766;VQSLOD=2.6245;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:18:12.01:0,12,164	1/1:5,1:5:2.73:24,3,0	0/0:56,0:14:26.48:0,26,565	0/0:67,0:14:26.30:0,26,458	0/0:23,0:23:15.03:0,15,283	0/0:25,0:24:14.64:0,15,147	0/0:23,0:19:21.02:0,21,316	0/0:29,0:26:75.22:0,75,1525	0/0:28,0:22:21.80:0,22,318	0/1:18,1:14:54.04:65,0,54	1/1:12,1:12:5.24:56,5,0	1/1:26,4:22:14.29:155,14,0	0/1:24,0:18:8.52:32,0,9	0/1:30,1:28:6.84:61,0,7	1/1:31,1:28:11.62:163,12,0	0/1:24,1:21:15.80:23,0,16	0/1:18,1:18:38.75:39,0,84	1/1:7,0:5:0.17:0,0,0	0/0:43,0:27:66.23:0,66,1661	0/0:23,0:23:56.58:0,57,1154	0/0:63,0:62:99:0,124,2814	1/1:17,3:17:11.95:98,12,0	0/0:9,0:8:0.89:0,1,2	1/1:28,2:25:5.76:47,6,0	0/0:25,0:23:12.50:0,12,245	0/1:19,1:19:26.75:27,0,112	0/1:22,1:19:90.49:101,0,90	0/1:5,0:5:2.37:15,0,2
chr10	9876352	.	CAT	C	334.03	PASS	AB=0.976;AC=22;AF=0.393;AN=56;BaseQRankSum=6.184;DP=715;FS=1.346;HRun=0;HaplotypeScore=139.6703;InbreedingCoeff=0.3143;MQ=36.74;MQ0=31;MQRankSum=-1.207;QD=1.11;ReadPosRankSum=-3.185;VQSLOD=1.7893;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:17:8.97:0,9,71	1/1:6,0:5:1.55:4,2,0	0/0:56,0:13:6.24:0,6,433	0/0:65,0:9:10.05:0,10,340	0/0:23,0:23:11.96:0,12,95	0/0:17,2:18:3.99:0,4,46	0/0:23,2:19:11.80:0,12,132	0/0:36,0:30:80.08:0,80,1098	0/0:27,0:21:3.43:0,3,121	1/1:16,1:12:1.06:84,1,0	1/1:14,0:12:5.98:46,6,0	1/1:32,0:23:11.40:79,11,0	0/1:19,2:15:18.75:53,0,19	0/1:33,1:30:11.99:17,0,12	1/1:31,0:27:9.43:69,9,0	0/1:24,0:20:3.61:15,0,4	0/1:17,0:15:19.66:20,0,22	1/1:6,0:4:5.75:32,6,0	0/0:37,0:25:62.23:0,62,1271	0/0:21,0:21:36.88:0,37,853	0/0:59,0:59:99:0,100,2076	1/1:20,0:16:5.93:43,6,0	0/1:10,0:8:0:0,0,0	0/1:29,1:24:0.06:0,0,0	0/0:21,0:19:9.01:0,9,101	0/1:18,0:17:6.81:7,0,111	0/1:19,1:16:26.59:27,0,57	0/0:5,0:5:0.89:0,1,2
chr10	9876354	.	T	TACACAC	2436.32	PASS	AB=0.718;AC=36;AF=0.667;AN=54;BaseQRankSum=8.178;DP=704;FS=6.832;HRun=0;HaplotypeScore=153.4864;InbreedingCoeff=0.6112;MQ=36.28;MQ0=31;MQRankSum=-5.787;QD=6.20;ReadPosRankSum=-2.020;VQSLOD=1.5417;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:4,15:16:0:0,0,0	1/1:3,3:5:0.47:2,0,0	0/0:52,0:13:19.83:0,20,429	0/0:67,0:10:18.05:0,18,337	0/1:5,16:21:0:0,0,0	1/1:8,10:17:1.56:50,2,0	1/1:18,7:18:6.01:114,6,0	0/0:34,0:27:54.09:0,54,1017	1/1:6,20:20:9.48:192,9,0	1/1:10,5:11:5.35:337,5,0	1/1:4,10:12:3.48:34,3,0	1/1:23,9:23:5.25:85,5,0	1/1:14,7:15:12.90:218,13,0	0/0:22,13:31:0.74:0,1,14	1/1:20,11:27:0.88:2,1,0	1/1:15,10:21:12.23:132,12,0	1/1:12,5:15:9.36:216,9,0	1/1:5,1:4:5.81:70,6,0	0/0:36,0:25:72.06:0,72,1461	0/0:21,0:21:52.44:0,52,966	0/0:59,0:59:86.63:0,87,2229	1/1:16,2:15:0.89:2,1,0	0/1:8,1:8:0.03:0,0,0	0/1:28,3:25:0:1,0,0	1/1:6,15:19:0.47:2,0,0	1/1:9,8:17:27.45:732,27,0	1/1:12,7:15:15.52:406,16,0	./.
chr10	9876364	.	C	CAG	263.86	PASS	AB=1.000;AC=29;AF=0.630;AN=46;BaseQRankSum=6.150;DP=592;FS=3.308;HRun=0;HaplotypeScore=95.5911;InbreedingCoeff=0.4681;MQ=34.11;MQ0=30;MQRankSum=-4.560;QD=0.94;ReadPosRankSum=-1.835;VQSLOD=1.6087;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:12:3.01:41,3,0	./.	0/0:46,0:11:2.37:0,2,8	0/0:64,0:10:5.76:0,6,48	./.	1/1:9,4:12:3:46,3,0	1/1:14,11:20:3.48:43,3,0	0/0:25,0:20:11.60:0,12,101	1/1:20,5:19:3.46:24,3,0	0/1:12,0:6:0:0,0,0	1/1:14,0:11:0.47:1,0,0	1/1:23,0:14:2.92:17,3,0	1/1:15,0:10:5.64:22,6,0	1/1:23,0:18:2.94:18,3,0	1/1:24,0:20:2.92:17,3,0	1/1:22,0:18:9.74:68,10,0	0/1:13,0:12:2.31:21,0,2	1/1:7,0:4:1.25:3,1,0	0/0:29,0:23:19.99:0,20,283	0/0:20,0:21:32.65:0,33,318	0/0:53,0:54:49.17:0,49,664	./.	0/0:8,0:6:0:0,0,0	0/1:25,0:20:0.16:0,0,0	./.	1/1:15,0:12:8.62:56,9,0	./.	1/1:5,0:5:2.96:19,3,0
chr10	9876367	.	A	ACT	496.46	PASS	AB=0.969;AC=21;AF=0.389;AN=54;BaseQRankSum=7.539;DP=605;FS=5.218;HRun=0;HaplotypeScore=95.6994;InbreedingCoeff=0.0778;MQ=33.62;MQ0=39;MQRankSum=-5.525;QD=1.82;ReadPosRankSum=-1.002;VQSLOD=1.1631;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:13:2.44:0,2,24	0/1:7,0:4:0.01:0,0,0	0/0:43,0:9:26.82:0,27,317	0/0:62,0:10:20.90:0,21,295	0/1:16,0:15:0.03:0,0,0	1/1:14,0:13:2.50:10,2,0	0/1:24,0:17:29.50:29,0,72	0/0:26,0:19:54.18:0,54,856	0/1:25,0:19:6.61:55,0,7	0/1:12,0:6:27.45:55,0,27	1/1:14,0:11:0.47:1,0,0	1/1:24,0:15:2.29:21,2,0	0/1:16,0:11:17.16:65,0,17	0/0:25,0:18:2.69:0,3,19	0/0:25,0:21:5.75:0,6,37	0/1:23,1:19:17.85:18,0,29	0/1:16,0:13:41.49:41,0,73	0/0:7,0:4:6.02:0,6,69	0/0:32,0:23:69.18:0,69,1008	0/0:21,0:21:57.08:0,57,806	0/0:54,0:53:99:0,129,1884	./.	1/1:6,2:5:0.89:2,1,0	0/1:15,11:20:0.16:1,0,0	1/1:17,0:15:0.47:1,0,0	0/1:17,0:14:88.54:196,0,89	0/1:13,0:9:1.07:132,0,1	0/0:5,0:5:2.80:0,3,13
chr10	9876528	.	G	GCA	5859.98	PASS	AB=0.605;AC=17;AF=0.304;AN=56;BaseQRankSum=-1.386;DP=869;FS=7.083;HRun=0;HaplotypeScore=138.2401;InbreedingCoeff=0.2132;MQ=42.61;MQ0=73;MQRankSum=-1.523;QD=16.10;ReadPosRankSum=1.246;VQSLOD=4.6481;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:33:54.17:0,54,668	1/1:3,11:14:15.03:246,15,0	0/0:47,0:9:19.75:0,20,214	0/0:56,0:13:23.89:0,24,252	0/0:23,0:21:29.83:0,30,349	0/0:23,0:21:33.10:0,33,408	0/0:41,0:38:56.64:0,57,652	0/0:15,0:11:29.92:0,30,337	0/0:40,0:37:45.14:0,45,554	0/1:15,29:40:36.61:1115,0,37	0/1:7,9:18:99:219,0,121	0/1:10,27:30:38.21:456,0,38	0/1:10,24:30:39.75:496,0,40	0/1:8,19:22:22.13:178,0,22	0/1:14,25:34:19.08:228,0,19	1/1:7,21:26:27.09:428,27,0	0/1:14,19:29:14.05:801,0,14	0/1:11,15:24:21.97:437,0,22	0/0:19,0:11:24.04:0,24,269	0/0:14,0:13:27.08:0,27,330	0/0:63,0:64:99:0,153,1816	0/0:33,0:32:53.91:0,54,668	0/0:18,0:17:36.11:0,36,446	0/0:49,0:39:71.82:0,72,821	0/0:17,0:15:38.88:0,39,422	0/1:9,25:29:35.87:962,0,36	1/1:5,13:16:12.04:196,12,0	1/1:5,2:5:6.02:98,6,0
chr10	9876587	.	CAGAGAGAGAGAGAGAGAGAGAGAGAGAG	C	556.83	PASS	AC=4;AF=0.074;AN=54;BaseQRankSum=-2.981;DP=678;FS=0.000;HRun=0;HaplotypeScore=329.8994;InbreedingCoeff=0.6966;MQ=48.58;MQ0=21;MQRankSum=2.474;QD=14.28;ReadPosRankSum=-0.382;VQSLOD=1.5613;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:38:24.52:0,25,567	0/0:11,0:9:6.02:0,6,174	0/0:19,0:11:6:0,6,55	0/0:36,0:17:6.44:0,6,140	0/0:10,0:14:15.05:0,15,501	1/1:10,0:10:12.85:171,13,0	1/1:29,0:26:21.18:500,21,0	0/0:17,0:14:12.03:0,12,233	./.	0/0:29,0:23:39.13:0,39,1699	0/0:21,0:20:7.24:0,7,64	0/0:30,0:28:21.50:0,21,995	0/0:22,0:20:21.54:0,22,794	0/0:23,0:21:9.03:0,9,408	0/0:34,0:32:28.28:0,28,1384	0/0:21,0:19:27.07:0,27,923	0/0:33,0:30:48.82:0,49,2005	0/0:21,0:19:27.05:0,27,1705	0/0:19,0:13:24.08:0,24,1260	0/0:20,0:18:33.57:0,34,1074	0/0:43,0:41:70.12:0,70,2778	0/0:23,0:22:9.50:0,9,447	0/0:15,0:13:18.06:0,18,1111	0/0:40,0:41:81.24:0,81,4244	0/0:20,0:21:30.50:0,31,1364	0/0:29,0:21:32.77:0,33,752	0/0:10,0:10:6.49:0,6,421	0/0:9,0:9:8.18:0,8,524
chr10	9876792	.	T	TAC	1427.96	PASS	AB=0.920;AC=14;AF=0.269;AN=52;BaseQRankSum=-2.575;DP=697;FS=4.002;HRun=0;HaplotypeScore=146.1748;InbreedingCoeff=0.4044;MQ=39.72;MQ0=44;MQRankSum=1.013;QD=5.69;ReadPosRankSum=-0.261;VQSLOD=3.2612;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:32:2.10:0,2,35	./.	0/0:42,0:12:26.30:0,26,260	0/0:46,0:17:46.66:0,47,521	0/0:19,0:16:5.60:0,6,72	0/0:12,0:20:21:0,21,104	0/0:8,0:30:36.76:0,37,181	0/0:43,0:43:96.10:0,96,1118	0/0:11,0:21:28.34:0,28,147	0/1:21,0:20:41.99:42,0,59	./.	1/1:25,0:19:4.04:15,4,0	0/0:25,0:18:1.68:0,2,69	0/1:26,0:15:0.20:1,0,0	1/1:30,0:22:0.22:1,0,0	1/1:3,0:17:2.94:18,3,0	0/0:15,0:11:14.44:0,14,81	0/0:16,0:11:2.38:0,2,15	0/1:8,7:9:21.32:149,0,21	1/1:9,17:22:30.10:484,30,0	1/1:22,41:62:22.84:827,23,0	0/0:22,0:18:20.24:0,20,211	0/0:15,0:11:6.02:0,6,73	0/0:30,0:25:19.38:0,19,258	0/0:19,0:16:23.77:0,24,268	0/1:21,0:16:37.63:38,0,58	0/0:12,0:10:11.60:0,12,64	0/0:4,0:4:1.55:0,2,4
chr10	9876806	.	CACAT	C	129.66	PASS	AB=1.000;AC=16;AF=0.286;AN=56;BaseQRankSum=4.444;DP=686;FS=11.442;HRun=0;HaplotypeScore=151.7749;InbreedingCoeff=0.0869;MQ=36.41;MQ0=54;MQRankSum=-3.442;QD=0.54;ReadPosRankSum=-3.110;VQSLOD=1.4812;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,3:27:4.51:0,5,85	1/1:7,0:6:2.70:20,3,0	0/0:56,0:11:29.36:0,29,608	0/0:57,0:19:51.07:0,51,1118	0/0:16,0:14:6.02:0,6,151	0/1:21,0:17:8.39:8,0,112	0/0:32,0:26:35.20:0,35,232	0/0:41,0:34:97.86:0,98,2294	0/1:28,0:18:0.43:0,0,129	0/1:25,0:23:99:99,0,113	0/0:7,0:7:0:0,0,0	0/1:24,0:15:4.78:5,0,11	0/1:25,0:16:39.99:40,0,62	0/1:24,0:13:0:0,0,1	0/0:29,0:18:2.48:0,2,10	1/1:19,0:16:2.71:14,3,0	0/1:17,0:12:10.98:11,0,50	0/1:14,0:9:18.01:20,0,18	0/0:19,0:10:11.19:0,11,351	0/0:26,0:22:36.14:0,36,497	0/0:59,0:57:47.75:0,48,1185	0/0:18,0:14:21.07:0,21,428	0/1:13,0:9:2.46:2,0,136	0/0:24,1:20:27.30:0,27,509	0/0:21,0:17:24.70:0,25,482	0/1:20,0:14:19.47:19,0,139	0/0:9,0:7:11.75:0,12,72	1/1:2,0:2:3:28,3,0
chr10	9876814	.	CAGAGAGAGACAGAGAGAGAG	C	505.19	PASS	AB=0.811;AC=9;AF=0.161;AN=56;BaseQRankSum=1.368;DP=665;FS=0.000;HRun=0;HaplotypeScore=225.1553;InbreedingCoeff=0.2847;MQ=35.33;MQ0=59;MQRankSum=-0.987;QD=3.80;ReadPosRankSum=0.434;VQSLOD=1.9655;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:13,18:27:3.38:0,3,11	0/0:5,0:6:3.48:0,3,34	0/0:51,0:8:17.90:0,18,143	0/0:50,0:14:32.97:0,33,386	0/1:1,12:12:0.15:0,0,0	0/0:20,0:16:19.36:0,19,432	0/0:31,0:24:32.66:0,33,467	0/0:45,0:33:40.91:0,41,1083	0/1:26,0:16:2.91:3,0,231	0/1:22,0:23:25.21:25,0,801	0/0:6,0:7:0.47:0,0,1	0/0:20,0:14:6.98:0,7,133	0/0:20,0:15:29.92:0,30,408	0/0:23,0:13:1.55:0,2,4	0/0:22,0:17:3.25:0,3,7	1/1:16,0:14:2.87:33,3,0	0/0:15,0:11:13.45:0,13,290	0/1:12,0:9:99:121,0,121	0/0:22,0:10:26.92:0,27,1534	0/0:24,0:19:26.89:0,27,1119	0/0:56,0:54:70.41:0,70,3369	0/0:21,0:17:20.99:0,21,505	0/0:16,0:13:12.02:0,12,624	0/0:23,0:18:12.38:0,12,229	1/1:16,3:15:15.12:307,15,0	0/1:13,0:13:99:143,0,124	0/0:6,0:4:11.94:0,12,149	0/0:1,0:2:3.01:0,3,37
chr10	9876822	.	GAC	G	362.71	PASS	AB=0.987;AC=17;AF=0.304;AN=56;BaseQRankSum=3.317;DP=640;FS=3.142;HRun=0;HaplotypeScore=129.8826;InbreedingCoeff=0.0472;MQ=32.11;MQ0=65;MQRankSum=-1.650;QD=1.52;ReadPosRankSum=-0.019;VQSLOD=2.5309;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,1:29:1.05:0,1,3	1/1:7,0:6:2.88:38,3,0	0/0:44,0:6:11.14:0,11,120	0/0:43,0:11:26.10:0,26,243	0/1:13,0:11:0.03:0,0,0	0/0:19,0:15:5.06:0,5,95	0/0:30,0:20:32.74:0,33,240	0/0:38,0:21:40.91:0,41,533	0/1:25,0:15:4.87:5,0,90	0/1:23,1:21:66.63:67,0,113	0/1:8,0:7:0.12:0,0,0	0/1:26,1:18:11.97:15,0,12	0/1:25,0:15:43.20:43,0,69	0/0:29,0:15:0:0,0,0	0/0:24,1:13:3.12:0,3,20	0/0:21,0:16:2.74:0,3,14	0/1:19,0:14:3.31:3,0,21	0/1:14,1:9:9.29:100,0,9	0/0:22,0:10:26.71:0,27,240	0/0:22,0:17:26.78:0,27,234	0/0:50,0:48:48.60:0,49,784	0/1:18,0:14:9.54:10,0,95	0/0:15,0:12:1.33:0,1,22	0/1:22,0:19:9.25:9,0,65	1/1:18,0:14:17.06:144,17,0	0/1:16,0:12:61.84:62,0,62	0/0:9,0:5:1.83:0,2,62	1/1:1,0:1:0.89:2,1,0
chr10	9876824	.	CAGAGAGAGAG	C	283.51	PASS	AB=0.990;AC=13;AF=0.250;AN=52;BaseQRankSum=3.750;DP=646;FS=8.825;HRun=0;HaplotypeScore=166.1674;InbreedingCoeff=0.0848;MQ=31.68;MQ0=65;MQRankSum=-1.281;QD=1.49;ReadPosRankSum=3.244;VQSLOD=1.6146;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:27:3.11:0,3,9	0/0:7,0:6:2.88:0,3,16	./.	./.	0/1:13,0:11:0.08:0,0,0	0/1:19,0:15:19.11:19,0,19	0/1:26,3:19:0:0,0,0	0/0:38,0:21:14.88:0,15,427	1/1:17,5:13:3.01:84,3,0	0/1:25,0:23:35.53:36,0,370	0/1:8,0:7:0:0,0,0	0/0:26,0:18:7.93:0,8,72	0/0:25,0:15:10.91:0,11,194	0/0:32,0:17:3.84:0,4,21	0/0:27,0:15:4.68:0,5,29	1/1:22,0:17:1.32:16,1,0	0/0:21,0:16:16.14:0,16,196	0/1:15,0:9:65.55:66,0,119	0/0:23,0:11:24.08:0,24,726	0/0:21,0:16:15.05:0,15,497	0/0:50,0:48:46.39:0,46,1552	0/0:17,0:13:9.02:0,9,217	0/0:18,0:12:9.03:0,9,327	0/0:24,0:20:9.22:0,9,132	0/1:19,0:15:15.20:20,0,15	0/1:16,0:12:76.67:162,0,77	0/0:10,0:6:5.99:0,6,59	0/1:2,0:2:3.68:4,0,18
chr10	9876846	.	GAGAGAGAGAGAGGGAC	G	429.26	PASS	AB=0.920;AC=8;AF=0.154;AN=52;BaseQRankSum=2.268;DP=696;FS=14.847;HRun=0;HaplotypeScore=206.5140;InbreedingCoeff=0.2079;MQ=31.62;MQ0=110;MQRankSum=0.139;QD=3.67;ReadPosRankSum=2.214;VQSLOD=1.8652;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:36:28.81:0,29,411	0/0:12,0:11:10.39:0,10,223	./.	./.	0/0:26,0:21:21.80:0,22,398	0/1:8,7:13:18.64:19,0,19	1/1:28,0:15:20.66:299,21,0	0/0:37,0:17:42.31:0,42,703	1/1:16,0:12:0.57:80,1,0	0/1:29,0:22:13.90:14,0,1056	0/0:11,0:9:3.95:0,4,39	0/0:30,0:21:21.09:0,21,319	0/0:27,0:15:22.95:0,23,527	0/0:42,0:21:28.60:0,29,441	0/0:31,0:19:30.04:0,30,405	0/0:24,0:19:2.44:0,2,225	0/0:24,0:20:37.54:0,38,480	0/1:16,0:9:13.45:13,0,397	0/0:22,0:11:27.09:0,27,886	0/0:17,0:13:19.25:0,19,677	0/0:47,0:45:68.73:0,69,2763	0/0:16,0:9:12.51:0,13,517	0/0:17,0:11:15.05:0,15,697	0/0:33,0:27:38.37:0,38,734	0/0:19,0:16:0.10:0,0,342	0/1:13,0:11:99:134,0,411	0/0:13,0:7:18.03:0,18,375	0/0:8,0:7:8.38:0,8,326
chr10	9876858	.	GGGAC	G	409.03	PASS	AB=1.000;AC=6;AF=0.107;AN=56;BaseQRankSum=0.761;DP=666;FS=7.908;HRun=0;HaplotypeScore=150.6318;InbreedingCoeff=0.6219;MQ=35.83;MQ0=94;MQRankSum=-0.521;QD=6.82;ReadPosRankSum=0.470;VQSLOD=2.3833;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:41:44.19:0,44,610	0/0:13,0:13:18.78:0,19,229	0/0:26,0:4:12.04:0,12,210	0/0:48,0:4:12.02:0,12,166	0/0:25,0:20:27.95:0,28,372	0/1:9,0:8:0:0,0,0	1/1:24,1:14:33.11:501,33,0	0/0:34,0:23:42.06:0,42,589	1/1:7,6:11:0.16:6,0,0	0/0:33,0:25:41.59:0,42,791	0/0:10,0:9:6.96:0,7,90	0/0:32,0:24:31.47:0,31,388	0/0:20,0:14:21.79:0,22,289	0/0:32,0:17:33.41:0,33,429	0/0:30,0:21:39.95:0,40,451	0/0:14,0:11:19.42:0,19,221	0/0:27,0:26:40.06:0,40,638	0/0:16,0:12:32.65:0,33,421	0/1:13,0:8:3.88:4,0,287	0/0:12,0:11:19.25:0,19,325	0/0:47,0:45:67.39:0,67,1375	0/0:20,0:14:30.51:0,31,494	0/0:14,0:9:18.06:0,18,344	0/0:36,0:30:46.54:0,47,683	0/0:26,0:23:47.19:0,47,650	0/0:18,0:17:33.80:0,34,551	0/0:13,0:9:21.06:0,21,269	0/0:12,0:10:18.35:0,18,376
chr10	9877032	.	GCA	G	447.17	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=-1.248;DP=725;FS=12.959;HRun=0;HaplotypeScore=158.6983;InbreedingCoeff=0.6450;MQ=43.88;MQ0=12;MQRankSum=2.073;QD=4.66;ReadPosRankSum=2.294;VQSLOD=2.4384;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:19,5:22:15.79:172,16,0	0/0:20,0:18:18.94:0,19,170	0/0:39,0:18:7.22:0,7,322	0/0:38,0:26:48.11:0,48,671	1/1:16,7:22:18.06:222,18,0	0/0:18,1:18:23.67:0,24,272	0/1:28,0:26:3.92:4,0,420	0/0:24,0:18:33.06:0,33,443	0/0:32,0:30:17.94:0,18,232	0/0:35,0:34:70.88:0,71,608	0/0:11,0:9:5.98:0,6,47	0/0:34,0:31:9.57:0,10,51	0/0:29,0:25:8.83:0,9,54	0/0:28,0:25:4.77:0,5,49	0/0:36,0:33:9.21:0,9,71	0/0:29,0:27:9.37:0,9,84	0/0:24,0:22:17.76:0,18,103	0/0:13,0:11:8.39:0,8,46	0/0:18,0:9:27.06:0,27,385	0/0:18,0:18:39.10:0,39,582	0/0:70,0:70:99:0,128,1924	0/0:24,0:23:39.57:0,40,550	0/0:13,0:14:8.99:0,9,94	0/0:27,0:24:0:0,0,0	1/1:6,15:20:15.05:186,15,0	0/0:27,0:26:35.17:0,35,393	0/0:8,0:5:2.60:0,3,10	0/0:11,0:11:28.09:0,28,218
chr10	9877047	.	C	CACAGAGAGAA	547.99	PASS	AB=0.941;AC=15;AF=0.268;AN=56;BaseQRankSum=-0.629;DP=674;FS=0.000;HRun=0;HaplotypeScore=199.7801;InbreedingCoeff=0.2191;MQ=44.53;MQ0=16;MQRankSum=0.020;QD=2.26;ReadPosRankSum=-5.494;VQSLOD=0.7355;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:22:10.94:0,11,158	0/1:16,0:14:10.87:11,0,181	0/0:33,0:13:32.14:0,32,474	0/0:31,0:21:38.86:0,39,907	0/0:23,0:22:17.82:0,18,303	0/1:22,0:21:41.33:41,0,190	0/0:27,0:22:35.79:0,36,577	0/1:24,0:13:38.98:39,0,139	0/0:28,0:24:17.65:0,18,299	0/0:27,0:26:72.22:0,72,879	1/1:10,0:9:0.47:1,0,0	0/0:31,0:29:8.31:0,8,180	0/0:27,0:23:8.31:0,8,45	0/0:27,0:25:14.22:0,14,172	0/0:33,0:28:7.71:0,8,119	0/0:27,0:24:7.63:0,8,68	0/0:23,0:20:7.93:0,8,195	0/0:12,0:11:7.20:0,7,54	0/1:23,0:11:19.99:20,0,244	0/0:16,0:16:2.45:0,2,353	0/1:65,0:65:96.62:97,0,1590	1/1:26,0:25:27.53:398,28,0	1/1:12,0:12:11.18:73,11,0	0/1:7,16:22:0:0,0,0	0/0:18,0:17:14.42:0,14,241	0/0:21,0:20:28.22:0,28,444	1/1:8,0:5:0.47:2,0,0	0/1:11,0:11:13.22:13,0,207
chr10	9877049	.	GAGAGAGAC	G	2257.30	PASS	AB=0.724;AC=20;AF=0.357;AN=56;BaseQRankSum=-1.815;DP=640;FS=26.185;HRun=0;HaplotypeScore=155.2046;InbreedingCoeff=0.6028;MQ=44.62;MQ0=14;MQRankSum=-1.837;QD=9.10;ReadPosRankSum=3.181;VQSLOD=1.2235;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:21:10.71:0,11,40	1/1:13,1:12:14.92:178,15,0	0/0:30,0:11:17.92:0,18,190	0/0:31,0:21:38.06:0,38,495	0/0:23,0:22:7.32:0,7,75	0/0:21,0:20:18.04:0,18,153	0/0:26,0:21:16.70:0,17,302	0/0:24,0:13:30:0,30,353	0/0:29,0:25:11.94:0,12,174	1/1:24,2:25:50.21:730,50,0	0/0:1,8:7:0:0,0,1	1/1:3,26:27:5.78:163,6,0	0/1:7,19:21:0:0,0,0	1/1:23,5:24:7.48:215,7,0	1/1:27,3:26:4.27:123,4,0	0/0:6,18:22:2.92:0,3,18	1/1:18,2:17:9.25:256,9,0	0/1:6,7:11:7.68:8,0,22	0/0:21,0:10:24.04:0,24,392	0/0:15,0:15:33.90:0,34,705	0/0:62,0:62:99:0,130,2716	0/1:25,0:24:12.90:13,0,41	0/0:12,0:12:4.71:0,5,39	0/0:23,0:21:0:0,0,0	0/0:18,0:17:10.36:0,10,42	1/1:5,15:19:44.81:575,45,0	0/1:4,4:5:0.21:0,0,0	1/1:8,1:9:3.52:170,4,0
chr10	9877084	.	A	ACAGG	122.65	PASS	AB=0.961;AC=11;AF=0.196;AN=56;BaseQRankSum=4.006;DP=530;FS=0.000;HRun=0;HaplotypeScore=98.5139;InbreedingCoeff=0.0332;MQ=44.22;MQ0=29;MQRankSum=-0.405;QD=0.69;ReadPosRankSum=0.484;VQSLOD=1.4134;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:11,4:12:32.25:65,0,32	0/1:9,0:7:41.03:61,0,41	0/0:35,0:10:18.04:0,18,337	0/1:58,0:21:6.10:6,0,293	0/0:14,0:13:3.01:0,3,33	0/1:18,0:18:17.92:18,0,223	0/0:25,0:18:7.40:0,7,114	0/0:31,0:22:63.22:0,63,1242	0/0:21,0:16:12.03:0,12,158	0/0:11,0:9:27.02:0,27,323	0/1:7,0:5:0:0,0,0	0/0:18,0:14:6.02:0,6,91	0/0:17,0:12:9.03:0,9,165	0/0:16,0:11:10.73:0,11,49	0/0:25,0:18:6.72:0,7,79	1/1:20,0:16:2.67:20,3,0	0/0:16,0:11:15.78:0,16,247	0/1:8,0:7:6.10:6,0,122	0/0:19,0:10:30.10:0,30,603	0/0:15,0:14:27.56:0,28,491	0/0:42,0:39:99:0,105,1914	0/0:15,0:13:15.04:0,15,210	0/0:12,0:11:4.70:0,5,66	0/1:17,0:12:0:0,0,0	0/1:10,2:11:6.74:50,0,7	0/1:13,0:12:24.60:25,0,129	0/0:14,0:6:4.21:0,4,27	0/0:7,0:4:8.99:0,9,77
chr10	9877087	.	G	GGGAC	260.10	PASS	AB=0.974;AC=14;AF=0.250;AN=56;BaseQRankSum=4.882;DP=505;FS=2.141;HRun=0;HaplotypeScore=90.1792;InbreedingCoeff=0.0373;MQ=43.05;MQ0=28;MQRankSum=-0.905;QD=1.55;ReadPosRankSum=-0.278;VQSLOD=1.8577;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:9,0:7:3:74,3,0	0/1:6,0:6:8.02:92,0,8	0/0:35,0:10:17.73:0,18,326	0/0:56,0:19:0.64:0,1,409	0/0:13,0:13:2.80:0,3,34	0/1:18,0:18:17.97:18,0,205	0/1:24,0:17:13.70:14,0,82	0/0:32,0:24:72.22:0,72,1352	0/0:20,0:15:12.03:0,12,156	0/0:9,0:7:17.33:0,17,178	0/1:8,0:6:0:0,0,0	0/0:15,0:13:5.19:0,5,21	0/0:17,0:12:9.03:0,9,171	0/1:11,3:11:28.64:41,0,29	0/0:15,2:13:3.83:0,4,41	1/1:17,0:15:5.89:63,6,0	0/1:13,0:10:1.72:2,0,184	0/1:8,1:8:33.09:33,0,114	0/0:19,0:11:33.09:0,33,618	0/0:15,0:14:27.52:0,28,455	0/0:39,0:36:92.89:0,93,1832	0/0:15,0:14:14.96:0,15,214	0/0:11,0:11:4.44:0,4,65	0/1:18,0:13:0.02:0,0,0	0/1:11,0:10:9.84:50,0,10	0/1:11,0:11:9.76:10,0,88	0/0:8,0:5:3.92:0,4,13	0/0:2,0:1:3:0,3,29
chr10	9877093	.	G	GAGGGAC	856.44	PASS	AB=0.988;AC=31;AF=0.646;AN=48;BaseQRankSum=4.872;DP=480;FS=0.000;HRun=0;HaplotypeScore=98.8895;InbreedingCoeff=0.5927;MQ=42.91;MQ0=27;MQRankSum=-5.984;QD=3.64;ReadPosRankSum=-2.028;VQSLOD=1.6343;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:11:6.02:71,6,0	1/1:6,0:4:2.04:6,2,0	0/0:40,0:15:33.02:0,33,434	0/0:56,0:20:17.43:0,17,325	0/1:10,0:10:0:0,0,0	1/1:17,0:17:12.04:282,12,0	./.	0/0:26,0:23:33.11:0,33,598	1/1:20,1:16:9.03:225,9,0	1/1:11,0:8:8.95:83,9,0	0/1:8,0:6:0:1,0,0	1/1:18,0:14:3.01:37,3,0	0/1:17,0:12:0:0,0,0	0/1:16,0:11:0:0,0,0	1/1:17,0:11:6.96:74,7,0	1/1:17,0:10:6:63,6,0	./.	1/1:7,0:6:6.02:81,6,0	0/0:15,0:10:21.05:0,21,395	0/0:12,0:11:12.02:0,12,235	0/0:41,0:38:68.59:0,69,1234	./.	1/1:10,0:9:0.57:1,1,0	0/1:15,0:11:0:1,0,0	1/1:11,0:10:3.48:34,3,0	1/1:8,0:7:0.89:2,1,0	1/1:11,0:5:3.01:40,3,0	./.
chr10	9877213	.	GCA	G	9816.11	PASS	AB=0.933;AC=47;AF=0.839;AN=56;BaseQRankSum=-4.386;DP=850;FS=0.000;HRun=0;HaplotypeScore=151.0538;InbreedingCoeff=0.7545;MQ=46.60;MQ0=73;MQRankSum=3.323;QD=14.04;ReadPosRankSum=4.431;VQSLOD=4.6753;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,15:24:30.01:339,30,0	1/1:2,10:12:17.89:193,18,0	0/0:43,0:5:5.78:0,6,35	0/0:52,1:9:20.92:0,21,238	1/1:4,20:22:41.79:478,42,0	0/0:13,0:23:29.50:0,30,264	0/1:12,1:25:14.73:15,0,146	1/1:14,16:24:38.99:415,39,0	0/0:10,0:29:42.03:0,42,430	1/1:17,33:48:98.41:1093,98,0	1/1:9,12:21:26.85:283,27,0	1/1:20,25:41:45.12:536,45,0	1/1:6,18:26:47.96:535,48,0	1/1:9,27:35:45.12:536,45,0	1/1:8,26:31:30.06:357,30,0	1/1:9,15:25:9.88:313,10,0	1/1:8,14:20:5.19:247,5,0	1/1:4,20:23:33.10:393,33,0	1/1:10,10:15:25.29:288,25,0	1/1:7,13:19:3.95:315,4,0	1/1:15,49:64:65.53:718,66,0	1/1:13,17:29:47.78:513,48,0	1/1:3,9:10:9.03:107,9,0	1/1:8,22:26:45.09:512,45,0	1/1:11,13:21:21.02:239,21,0	1/1:11,22:32:58.78:660,59,0	1/1:5,7:12:20.80:223,21,0	1/1:6,19:23:44.97:509,45,0
chr10	9877280	.	CAT	C	2660.05	PASS	AB=0.988;AC=26;AF=0.464;AN=56;BaseQRankSum=5.135;DP=740;FS=4.679;HRun=0;HaplotypeScore=143.4985;InbreedingCoeff=-0.2891;MQ=44.49;MQ0=33;MQRankSum=2.695;QD=4.75;ReadPosRankSum=10.551;VQSLOD=1.1559;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:36,1:34:36.96:85,0,37	0/1:10,0:10:5.56:55,0,6	0/0:36,0:8:17.14:0,17,264	0/0:36,0:5:5.20:0,5,144	0/1:22,1:23:13.63:123,0,14	0/1:21,0:20:49.35:49,0,51	0/1:19,1:19:5.27:80,0,5	0/0:37,0:28:56.20:0,56,996	0/1:33,2:33:31.92:254,0,32	1/1:34,1:33:30.87:405,31,0	1/1:23,0:22:22.79:111,23,0	0/1:25,0:22:14.89:97,0,15	0/1:18,0:18:42.93:43,0,45	0/1:30,0:28:52.27:52,0,91	0/1:27,0:25:24.86:72,0,25	0/1:29,0:23:83.91:104,0,84	1/1:32,0:30:1.40:276,1,0	0/1:19,1:18:63.39:96,0,63	0/0:20,0:16:41.96:0,42,586	0/0:18,0:17:27.52:0,28,441	0/0:31,0:27:30.99:0,31,579	0/1:25,0:23:29.79:93,0,30	0/1:15,0:14:13.39:35,0,13	0/1:40,0:39:79.76:181,0,80	0/1:27,0:24:7.78:51,0,8	0/1:32,0:31:23.56:279,0,24	1/1:17,0:17:14.70:179,15,0	0/1:19,0:19:47.44:108,0,47
chr10	9877282	.	TAC	T	8061.99	PASS	AB=0.700;AC=43;AF=0.768;AN=56;BaseQRankSum=2.930;DP=727;FS=4.839;HRun=0;HaplotypeScore=124.7202;InbreedingCoeff=0.8208;MQ=44.59;MQ0=33;MQRankSum=3.075;QD=14.53;ReadPosRankSum=3.611;VQSLOD=4.6362;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:20,16:33:24.08:309,24,0	1/1:7,3:10:6.34:71,6,0	0/0:34,0:7:9.03:0,9,152	0/0:36,0:3:6.02:0,6,98	1/1:12,10:22:33.09:411,33,0	1/1:13,7:19:14.90:179,15,0	1/1:12,7:18:14.79:192,15,0	0/0:34,0:24:52.34:0,52,788	1/1:25,10:33:50.78:643,51,0	1/1:23,10:31:56.17:885,56,0	1/1:13,10:22:24.08:308,24,0	1/1:18,6:21:22.25:273,22,0	1/1:13,5:18:11.96:153,12,0	1/1:24,6:28:24:271,24,0	1/1:17,8:24:11.86:223,12,0	0/1:16,12:23:11.27:352,0,11	1/1:29,5:32:32.50:622,33,0	1/1:17,3:18:18.06:222,18,0	0/0:20,0:16:27.09:0,27,442	0/0:16,1:16:21.54:0,22,338	0/0:30,1:27:30.10:0,30,505	1/1:19,6:23:30.08:371,30,0	1/1:9,6:14:8.98:116,9,0	1/1:29,13:41:40.51:555,41,0	1/1:16,11:24:15.05:193,15,0	1/1:25,6:31:75.12:892,75,0	1/1:13,4:17:34.29:438,34,0	1/1:15,6:21:28.67:382,29,0
chr10	9877296	.	CAGAGAG	C	1442.65	PASS	AB=0.895;AC=27;AF=0.540;AN=50;BaseQRankSum=2.451;DP=682;FS=34.240;HRun=0;HaplotypeScore=159.6365;InbreedingCoeff=0.3928;MQ=42.78;MQ0=24;MQRankSum=-1.811;QD=3.75;ReadPosRankSum=1.478;VQSLOD=1.1484;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:35:0.47:0,0,1	1/1:6,0:7:5.44:94,5,0	./.	./.	1/1:16,0:20:0.47:1,0,0	./.	1/1:18,4:21:6.02:103,6,0	0/0:25,0:22:15.05:0,15,385	0/1:27,5:30:26.62:109,0,27	0/1:32,2:33:29.81:368,0,30	1/1:23,2:24:3.01:58,3,0	1/1:24,4:24:5.92:81,6,0	0/0:16,1:17:0.94:0,1,3	1/1:18,5:20:6.02:119,6,0	1/1:16,2:18:2.58:52,3,0	1/1:22,9:26:5.63:121,6,0	0/1:32,0:35:77.74:78,0,137	1/1:17,2:17:4.96:120,5,0	0/0:16,0:16:14.96:0,15,321	0/0:17,0:15:6.47:0,6,99	0/0:32,0:28:12.04:0,12,260	0/0:22,0:23:18.06:0,18,284	0/1:14,0:14:0:0,0,0	0/0:31,1:39:35.21:0,35,530	0/1:19,0:22:0:0,0,0	1/1:26,1:27:8.89:126,9,0	0/0:15,1:16:0:0,0,0	1/1:15,1:18:9.03:161,9,0
chr10	9878339	.	GGA	G	1165.38	PASS	AB=0.871;AC=9;AF=0.161;AN=56;BaseQRankSum=5.098;DP=681;FS=0.679;HRun=0;HaplotypeScore=76.9481;InbreedingCoeff=0.4363;MQ=50.11;MQ0=41;MQRankSum=1.362;QD=10.79;ReadPosRankSum=1.782;VQSLOD=3.2501;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:61.90:0,62,1054	0/1:8,0:8:8.84:9,0,138	0/0:105,0:16:13.91:0,14,104	0/0:137,0:10:12.34:0,12,133	0/0:19,0:19:36.12:0,36,588	0/1:3,13:15:2.77:314,0,3	1/1:4,16:21:38.94:472,39,0	0/1:17,1:18:2.08:2,0,471	1/1:1,18:19:39.12:497,39,0	0/0:22,1:23:21.86:0,22,833	0/0:11,0:11:27.08:0,27,424	0/1:12,1:13:8.06:8,0,396	0/0:16,0:15:39.13:0,39,632	0/0:10,0:10:21.07:0,21,350	0/0:21,0:21:42.13:0,42,645	0/0:16,0:16:45.14:0,45,720	0/0:24,0:21:54.11:0,54,813	0/0:20,0:20:51.17:0,51,833	0/0:13,0:12:30.09:0,30,455	0/0:9,0:9:24.08:0,24,401	0/0:22,0:21:45.62:0,46,712	0/0:15,0:15:34.35:0,34,506	0/0:9,0:8:15.05:0,15,251	0/0:24,0:24:39.01:0,39,615	0/1:11,1:13:5.08:5,0,467	0/0:20,0:20:4.10:0,4,611	0/0:17,0:17:48.13:0,48,743	0/0:6,0:6:18.06:0,18,278
chr10	9878456	.	C	CAG	916.94	PASS	AB=0.904;AC=12;AF=0.214;AN=56;BaseQRankSum=2.036;DP=366;FS=11.856;HRun=0;HaplotypeScore=90.0494;InbreedingCoeff=0.6585;MQ=67.56;MQ0=11;MQRankSum=-1.505;QD=6.64;ReadPosRankSum=-1.493;VQSLOD=1.5447;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,13:17:27.07:413,27,0	0/0:6,0:6:12.04:0,12,154	0/0:31,0:12:15.55:0,16,117	0/1:62,0:28:1.96:2,0,107	1/1:3,8:11:14.98:220,15,0	0/0:12,0:12:21.05:0,21,255	0/0:14,0:14:21.07:0,21,270	0/0:18,0:17:5.23:0,5,255	0/0:14,0:14:16.78:0,17,356	0/0:10,0:10:27.09:0,27,347	0/0:4,0:4:3.01:0,3,38	0/0:11,0:10:18.05:0,18,219	0/0:8,0:8:21.05:0,21,254	0/0:5,0:5:8.41:0,8,115	0/0:11,0:11:0.51:0,1,243	0/0:8,0:8:24.07:0,24,296	0/0:5,0:5:15.01:0,15,174	0/0:6,0:6:9.03:0,9,116	0/0:13,0:11:30.10:0,30,386	0/0:12,0:12:21.06:0,21,253	0/0:14,0:13:8.08:0,8,115	1/1:3,8:9:5.95:67,6,0	1/1:4,6:10:15.05:231,15,0	0/1:11,3:13:0.96:92,0,1	1/1:2,8:10:3.01:51,3,0	0/0:9,0:9:14.93:0,15,175	0/0:9,0:9:21.05:0,21,255	0/0:7,0:7:15.05:0,15,192
chr10	9878649	.	G	GGA	417.60	PASS	AB=0.901;AC=14;AF=0.259;AN=54;BaseQRankSum=2.707;DP=218;FS=4.294;HRun=0;HaplotypeScore=60.0612;InbreedingCoeff=-0.3316;MQ=74.46;MQ0=6;MQRankSum=-2.971;QD=4.86;ReadPosRankSum=0.233;VQSLOD=1.9001;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:3,4:7:26.72:86,0,27	0/0:2,0:2:6.02:0,6,76	0/0:26,0:11:21.30:0,21,175	0/0:39,0:16:7.64:0,8,157	0/1:7,1:8:0:0,0,0	0/1:3,0:3:40.33:40,0,67	0/0:6,0:6:18.06:0,18,227	0/1:7,1:8:29.85:30,0,208	0/0:8,0:8:21.07:0,21,267	0/1:8,0:8:56.72:57,0,158	0/0:8,0:9:8.85:0,9,114	0/1:2,0:2:30.56:31,0,32	0/0:5,0:4:9:0,9,97	0/0:5,0:5:15.05:0,15,188	0/1:3,1:4:32.02:45,0,32	0/1:5,1:6:50.75:51,0,120	0/1:5,1:6:40.64:41,0,63	0/1:2,0:2:2.42:2,0,33	0/1:7,0:5:12.86:57,0,13	0/1:9,0:9:35.49:35,0,122	0/1:8,2:10:48.13:48,0,63	0/0:6,0:6:2.90:0,3,37	0/0:4,0:4:6.02:0,6,76	0/0:12,0:12:2.58:0,3,140	0/0:2,0:2:6.02:0,6,70	0/1:5,1:6:35.93:36,0,137	0/0:6,0:6:12.04:0,12,153	./.
chr10	9878676	.	G	GGAGA	8946.44	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-4.204;DP=433;FS=3.795;HRun=0;HaplotypeScore=111.9355;InbreedingCoeff=0.8892;MQ=79.83;MQ0=11;MQRankSum=-3.015;QD=38.73;ReadPosRankSum=0.265;VQSLOD=4.6385;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,3:15:26.86:521,27,0	1/1:5,1:6:12.04:269,12,0	0/0:41,0:24:9.31:0,9,259	0/0:54,0:27:11.19:0,11,217	1/1:10,5:20:32.90:611,33,0	0/0:9,0:8:21.07:0,21,338	0/0:16,0:16:42.14:0,42,720	0/0:19,0:20:39.10:0,39,579	0/0:13,0:13:33.07:0,33,514	1/1:10,7:24:51.01:1131,51,0	1/1:3,11:14:6.02:140,6,0	1/1:2,7:10:15.05:347,15,0	1/1:5,1:8:12.03:236,12,0	1/1:1,4:6:9.03:196,9,0	1/1:2,3:6:12.04:301,12,0	1/1:4,10:15:39.13:890,39,0	1/1:3,7:10:24.08:602,24,0	1/1:8,2:11:2.47:349,2,0	0/0:13,0:13:21.07:0,21,351	0/0:20,0:20:45.11:0,45,627	0/0:13,0:13:24.08:0,24,401	1/1:8,3:13:15.05:361,15,0	1/1:4,4:12:21.07:511,21,0	1/1:6,8:14:23.29:521,23,0	1/1:1,0:5:6.02:147,6,0	1/1:3,16:20:51.13:1074,51,0	1/1:4,4:10:21.07:465,21,0	1/1:0,3:4:12.04:274,12,0
chr10	9878755	.	TCC	T	8054.88	PASS	AB=0.688;AC=42;AF=0.750;AN=56;BaseQRankSum=-6.815;DP=420;FS=1.095;HRun=11;HaplotypeScore=71.5762;InbreedingCoeff=0.6306;MQ=76.23;MQ0=6;MQRankSum=-0.536;QD=22.56;ReadPosRankSum=4.947;VQSLOD=4.4248;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:9,2:21:29.35:29,0,91	1/1:4,11:14:30.06:319,30,0	0/0:10,0:9:14.50:0,15,133	0/0:15,0:15:9.58:0,10,116	0/1:5,2:12:30.53:43,0,31	1/1:3,14:17:42.10:447,42,0	1/1:3,15:18:45.11:479,45,0	0/0:8,1:11:5.46:0,5,28	1/1:1,19:20:51.12:543,51,0	1/1:4,11:15:39.09:415,39,0	1/1:0,8:10:29.55:279,30,0	1/1:4,15:19:45.10:479,45,0	1/1:4,13:17:39.06:415,39,0	1/1:7,7:14:33.05:351,33,0	1/1:1,13:14:39.10:415,39,0	1/1:2,17:20:45:534,45,0	1/1:2,9:10:30.05:309,30,0	1/1:2,20:22:57.12:606,57,0	0/0:8,0:17:34.09:0,34,160	0/0:2,0:9:19.84:0,20,68	0/1:4,5:13:9.22:135,0,9	1/1:2,7:8:15:160,15,0	1/1:3,9:12:30.07:319,30,0	1/1:4,14:16:39.05:405,39,0	0/1:8,0:9:1.26:1,0,243	1/1:0,16:16:48.12:511,48,0	1/1:3,22:25:63.14:671,63,0	1/1:2,7:9:18.04:192,18,0
chr10	9879867	.	C	CAA	15611.90	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-11.269;DP=597;FS=6.143;HRun=7;HaplotypeScore=72.8812;InbreedingCoeff=0.9812;MQ=78.55;MQ0=1;MQRankSum=-1.162;QD=39.03;ReadPosRankSum=3.038;VQSLOD=4.5069;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,26:28:72.24:1161,72,0	1/1:0,11:11:33.07:512,33,0	0/0:16,1:18:5.35:0,5,293	0/0:21,0:22:29.79:0,30,391	1/1:5,23:28:69.11:1025,69,0	0/0:20,0:20:45.10:0,45,513	0/0:22,0:22:54.16:0,54,629	0/0:20,0:20:51.13:0,51,585	0/0:19,0:19:51.15:0,51,594	1/1:4,19:24:60.16:932,60,0	1/1:5,20:25:57.19:915,57,0	1/1:2,13:15:36.12:571,36,0	1/1:2,14:16:36.12:590,36,0	1/1:2,13:16:39.12:598,39,0	1/1:1,22:23:60.20:984,60,0	1/1:3,20:25:60.20:964,60,0	1/1:3,17:20:51.16:812,51,0	1/1:1,14:15:36.12:591,36,0	0/0:22,0:22:63.15:0,63,705	0/0:32,0:32:90.26:0,90,1048	0/0:22,0:21:60.17:0,60,698	1/1:5,23:28:69.19:1073,69,0	1/1:3,11:15:38.62:596,39,0	1/1:1,21:22:54.18:886,54,0	1/1:1,16:18:42.14:668,42,0	1/1:5,21:26:63.18:980,63,0	1/1:2,24:26:57.05:935,57,0	1/1:0,17:18:51.17:817,51,0
chr10	9883220	.	TTG	T	4555.47	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-5.207;DP=714;FS=0.995;HRun=0;HaplotypeScore=142.6057;InbreedingCoeff=0.9038;MQ=59.67;MQ0=14;MQRankSum=3.738;QD=15.39;ReadPosRankSum=5.185;VQSLOD=4.6898;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:42:7.80:0,8,62	1/1:3,7:10:8.30:100,8,0	0/0:26,0:14:3.01:0,3,36	0/0:32,0:22:14.37:0,14,180	0/0:18,0:29:23.63:0,24,179	0/0:12,0:29:24.01:0,24,215	0/0:26,0:25:8.88:0,9,77	0/0:26,0:26:29.88:0,30,279	0/0:11,0:20:21.01:0,21,198	1/1:16,14:30:44.71:446,45,0	1/1:4,8:12:21.02:223,21,0	1/1:14,14:28:36.40:384,36,0	1/1:12,12:24:32.93:353,33,0	1/1:13,15:28:42.12:475,42,0	1/1:9,13:23:35.93:387,36,0	1/1:7,15:23:44.96:488,45,0	1/1:13,20:33:54.29:572,54,0	1/1:7,12:21:38.78:401,39,0	0/0:14,0:21:30.02:0,30,350	0/0:16,0:27:47.65:0,48,415	0/0:19,0:34:32.32:0,32,325	0/0:24,0:31:17.90:0,18,152	0/0:12,0:22:14.48:0,14,110	0/0:14,0:22:11.96:0,12,97	0/0:17,0:24:8.84:0,9,78	1/1:12,13:25:29.26:294,29,0	1/1:9,17:28:38.59:398,39,0	1/1:3,5:7:3.01:34,3,0
chr10	9884512	.	C	CT	1814.46	PASS	AB=0.919;AC=15;AF=0.268;AN=56;BaseQRankSum=0.060;DP=569;FS=3.085;HRun=10;HaplotypeScore=60.6185;InbreedingCoeff=0.7097;MQ=74.78;MQ0=4;MQRankSum=-0.047;QD=10.49;ReadPosRankSum=0.859;VQSLOD=2.7207;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,1:24:27.40:151,27,0	0/0:7,0:7:14.97:0,15,123	0/0:29,0:21:36.02:0,36,272	0/1:15,0:13:14.89:15,0,76	1/1:2,1:23:52.99:293,53,0	1/1:6,24:30:69.17:736,69,0	1/1:3,8:10:21.05:224,21,0	0/0:35,0:36:75.17:0,75,619	1/1:3,10:13:27.06:283,27,0	0/0:35,0:35:83.86:0,84,683	0/0:19,0:20:52.96:0,53,425	0/0:21,0:21:53.94:0,54,443	0/0:24,1:25:39.53:0,40,520	0/0:14,1:15:6.95:0,7,263	0/0:22,0:23:61.96:0,62,498	0/0:19,0:19:53.93:0,54,443	0/0:25,0:25:59.87:0,60,492	0/0:20,0:20:18.49:0,18,340	0/0:15,0:15:32.94:0,33,271	0/0:27,0:27:45.70:0,46,562	0/1:8,2:10:40.03:40,0,121	0/0:18,2:20:21.94:0,22,387	0/0:15,0:15:38.91:0,39,317	0/0:12,0:12:29.95:0,30,246	1/1:4,3:22:40.31:253,40,0	0/1:22,2:23:13.11:13,0,319	0/0:27,0:27:64.73:0,65,523	0/0:4,0:4:11.99:0,12,99
chr10	9884851	.	ATGGG	A	499.84	PASS	AB=0.958;AC=15;AF=0.268;AN=56;BaseQRankSum=9.602;DP=617;FS=1.118;HRun=0;HaplotypeScore=202.8245;InbreedingCoeff=-0.2872;MQ=54.94;MQ0=3;MQRankSum=-4.962;QD=1.64;ReadPosRankSum=-4.044;VQSLOD=1.6042;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:30:19.78:0,20,402	0/1:13,0:13:69.87:70,0,127	0/0:23,0:15:26.82:0,27,463	0/0:23,0:17:18.22:0,18,337	0/1:24,1:24:60.32:60,0,470	0/0:16,0:16:16.83:0,17,434	0/1:17,0:15:13.16:13,0,461	0/0:38,0:38:99:0,102,1892	0/1:19,1:20:26.52:27,0,336	0/1:37,0:35:99:114,0,1442	0/0:23,0:23:15.85:0,16,618	0/1:18,0:18:0.88:1,0,516	0/1:20,0:20:74.49:74,0,552	0/1:20,0:20:19.72:20,0,452	0/1:18,0:18:0.34:0,0,348	0/1:19,1:19:45.99:46,0,484	0/0:23,0:23:16.60:0,17,454	0/1:12,7:19:18.97:19,0,521	0/0:12,0:12:30.08:0,30,515	0/0:28,0:28:71.03:0,71,1295	0/0:20,0:20:55.65:0,56,1110	0/1:21,0:20:1.04:7,0,1	0/1:22,0:23:38.29:38,0,125	0/0:14,0:14:8.14:0,8,74	0/0:34,0:34:33.75:0,34,1028	0/0:29,0:28:3.71:0,4,1282	0/1:19,1:19:48.95:49,0,513	0/1:11,2:12:99:108,0,198
chr10	9886128	.	TA	T	14180.95	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=18.335;DP=804;FS=0.933;HRun=8;HaplotypeScore=165.2176;InbreedingCoeff=1.0000;MQ=83.68;MQ0=0;MQRankSum=-3.439;QD=25.60;ReadPosRankSum=8.200;VQSLOD=2.5466;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,53:54:99:1477,153,0	1/1:0,16:16:48.08:463,48,0	0/0:22,0:22:41.55:0,42,460	0/0:24,0:24:53.33:0,53,548	1/1:6,36:41:99:1014,105,0	0/0:32,0:32:87.27:0,87,1050	0/0:36,0:37:99:0,102,1211	0/0:35,0:35:81.23:0,81,958	0/0:20,0:20:57.17:0,57,687	1/1:7,26:33:78.01:753,78,0	1/1:0,26:26:75.12:724,75,0	1/1:3,29:32:81.10:782,81,0	1/1:2,29:31:87.13:840,87,0	1/1:5,26:31:75.08:724,75,0	1/1:3,25:28:78.10:748,78,0	1/1:2,35:37:93.15:898,93,0	1/1:1,18:19:54.09:521,54,0	1/1:0,16:16:48.08:463,48,0	0/0:25,0:25:69.19:0,69,804	0/0:38,0:38:99:0,111,1330	0/0:17,0:17:48.15:0,48,578	1/1:4,22:26:63.10:608,63,0	1/1:7,25:32:75.06:724,75,0	1/1:1,27:28:81.12:782,81,0	1/1:2,29:31:90.12:864,90,0	1/1:6,24:30:72:695,72,0	1/1:2,25:27:75.11:724,75,0	1/1:2,13:15:39.06:377,39,0
chr10	9888521	.	GTGGGTGGA	G	2782.07	PASS	AB=1.000;AC=18;AF=0.321;AN=56;BaseQRankSum=14.927;DP=579;FS=9.224;HRun=0;HaplotypeScore=171.1194;InbreedingCoeff=-0.0203;MQ=69.97;MQ0=11;MQRankSum=-10.384;QD=9.53;ReadPosRankSum=-1.188;VQSLOD=1.8322;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:98.57:0,99,1898	0/1:10,0:10:49.66:50,0,53	0/0:26,0:21:23.97:0,24,340	0/0:21,0:16:19.11:0,19,221	0/0:30,0:29:77.62:0,78,2071	1/1:0,20:20:18.06:466,18,0	1/1:1,20:21:6.02:121,6,0	0/0:18,0:17:42.16:0,42,349	1/1:0,17:17:9.03:218,9,0	0/1:23,0:22:99:236,0,176	0/1:16,0:16:99:166,0,120	0/1:27,0:26:99:413,0,143	0/1:18,0:18:99:291,0,116	0/1:24,0:23:99:123,0,274	0/1:22,0:22:99:194,0,257	0/1:22,0:22:99:135,0,320	0/1:24,0:24:60.54:61,0,299	0/0:19,0:19:21.05:0,21,321	0/0:18,0:17:47.91:0,48,838	0/0:17,0:17:48:0,48,1379	0/0:18,0:16:41.69:0,42,864	0/0:22,0:22:55.24:0,55,1246	0/0:18,0:18:23.87:0,24,781	0/0:22,0:22:61.93:0,62,1192	0/0:24,0:24:72.01:0,72,1756	0/1:20,0:19:99:209,0,211	0/1:23,0:23:99:251,0,221	0/1:5,0:5:23.42:23,0,74
chr10	9888525	.	GTGGATGGATGGA	G	9765.86	PASS	AC=26;AF=0.500;AN=52;BaseQRankSum=6.183;DP=574;FS=3.673;HRun=0;HaplotypeScore=193.0580;InbreedingCoeff=0.8775;MQ=65.18;MQ0=13;MQRankSum=-7.864;QD=38.45;ReadPosRankSum=-0.463;VQSLOD=4.5626;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:45.15:0,45,2231	1/1:6,4:10:21.07:544,21,0	./.	./.	0/0:29,0:29:53.79:0,54,2622	0/0:20,0:20:12.59:0,13,65	0/0:20,0:20:4.56:0,5,33	0/0:17,0:16:1.69:0,2,18	0/0:17,0:17:7.31:0,7,47	1/1:8,13:20:33.10:959,33,0	1/1:10,6:16:21.07:602,21,0	1/1:15,12:26:48.16:1594,48,0	1/1:11,7:19:36.12:1124,36,0	1/1:20,5:25:33.10:896,33,0	1/1:16,6:22:27.09:884,27,0	1/1:18,5:23:27.09:770,27,0	1/1:19,4:23:11.88:365,12,0	1/1:17,1:18:9.87:225,10,0	0/0:17,0:15:18.06:0,18,902	0/0:16,0:16:33.11:0,33,1687	0/0:20,0:18:30.10:0,30,1284	0/0:23,0:23:6.25:0,6,1767	0/0:16,0:16:36.12:0,36,1277	0/0:24,0:24:45.14:0,45,1549	0/0:25,0:25:42.14:0,42,2126	1/1:14,7:19:24.08:820,24,0	1/1:13,9:23:27.09:881,27,0	1/1:4,1:5:3.01:103,3,0
chr10	9888623	.	G	GT	12666.65	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-11.199;DP=608;FS=0.699;HRun=6;HaplotypeScore=66.7298;InbreedingCoeff=0.9998;MQ=94.21;MQ0=0;MQRankSum=-5.471;QD=31.28;ReadPosRankSum=5.577;VQSLOD=4.8872;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,33:33:84.27:1057,84,0	1/1:2,14:16:36.12:452,36,0	0/0:31,0:31:80.81:0,81,789	0/0:26,0:26:54.05:0,54,530	1/1:5,21:26:60.19:754,60,0	0/0:18,0:18:48.07:0,48,479	0/0:15,0:15:42.10:0,42,428	0/0:30,0:30:75.13:0,75,746	0/0:26,0:26:69.15:0,69,704	1/1:2,21:23:63.19:781,63,0	1/1:2,12:13:33.06:397,33,0	1/1:0,15:15:42.13:528,42,0	1/1:0,24:24:66.21:830,66,0	1/1:3,22:25:60.19:755,60,0	1/1:3,25:28:69.22:868,69,0	1/1:2,24:26:69.22:868,69,0	1/1:4,25:29:66.21:830,66,0	1/1:0,12:12:36.12:453,36,0	0/0:13,0:13:33.05:0,33,328	0/0:19,0:19:57.13:0,57,581	0/0:25,0:25:60.13:0,60,612	1/1:2,22:24:54.17:679,54,0	1/1:1,12:13:35.98:452,36,0	1/1:2,22:24:57.18:717,57,0	1/1:3,18:21:54.12:660,54,0	1/1:0,16:16:39.12:491,39,0	1/1:2,23:25:57.18:717,57,0	1/1:0,11:11:30.10:377,30,0
chr10	9889415	.	A	AT	12043.96	PASS	AB=1.000;AC=39;AF=0.696;AN=56;BaseQRankSum=-13.934;DP=639;FS=0.000;HRun=8;HaplotypeScore=59.9990;InbreedingCoeff=0.9183;MQ=83.26;MQ0=0;MQRankSum=-2.535;QD=27.56;ReadPosRankSum=4.694;VQSLOD=4.9737;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,23:25:66.20:762,66,0	1/1:4,7:11:27.07:301,27,0	0/0:20,1:21:22.87:0,23,317	0/1:18,0:18:13.92:14,0,259	1/1:4,14:18:42.12:485,42,0	0/0:22,0:22:57.02:0,57,522	0/0:26,0:26:72.02:0,72,654	0/0:27,0:27:71.99:0,72,641	0/0:18,0:18:48.02:0,48,439	1/1:6,24:30:69.18:784,69,0	1/1:2,18:20:54.16:622,54,0	1/1:1,16:17:45.13:519,45,0	1/1:2,18:20:51.15:587,51,0	1/1:2,18:20:48.14:554,48,0	1/1:2,17:19:45.13:519,45,0	1/1:3,17:20:48.14:554,48,0	1/1:3,34:37:93.28:1073,93,0	1/1:1,17:18:38.95:450,39,0	0/0:26,0:26:72.03:0,72,658	0/0:35,0:35:99:0,99,902	0/0:27,0:27:66.02:0,66,601	1/1:1,25:26:72.17:816,72,0	1/1:3,21:24:60.18:692,60,0	1/1:3,19:22:51.15:589,51,0	1/1:1,22:23:54.16:623,54,0	1/1:4,32:36:96.26:1096,96,0	1/1:1,19:20:54.16:623,54,0	1/1:0,13:13:33.10:381,33,0
chr10	9890336	.	G	GAGAAA	30386.99	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-10.627;DP=665;FS=0.000;HRun=0;HaplotypeScore=96.8531;InbreedingCoeff=0.9940;MQ=71.59;MQ0=1;MQRankSum=-8.537;QD=58.89;ReadPosRankSum=8.268;VQSLOD=4.7076;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,29:33:81.11:2153,81,0	1/1:1,10:12:30.10:897,30,0	0/0:28,0:26:56.25:0,56,1069	0/0:27,0:24:44.20:0,44,840	1/1:2,29:32:78.13:2198,78,0	1/1:0,23:24:54.19:1641,54,0	1/1:3,11:18:24.08:728,24,0	0/0:28,0:28:69.21:0,69,1256	1/1:2,22:27:57.20:1731,57,0	1/1:4,33:39:99:2719,105,0	1/1:1,24:24:57.15:1645,57,0	1/1:1,17:17:36.12:1079,36,0	1/1:1,23:27:48.16:1464,48,0	1/1:5,15:24:45.15:1327,45,0	1/1:0,29:30:54.09:1638,54,0	1/1:4,21:29:51.18:1556,51,0	1/1:3,25:32:54.19:1647,54,0	1/1:2,11:15:27.05:752,27,0	0/0:24,0:24:69.16:0,69,1240	0/0:20,0:20:57.15:0,57,1040	0/0:22,0:22:57.17:0,57,1112	1/1:0,13:14:33.11:1003,33,0	1/1:1,8:11:13.70:445,14,0	1/1:6,14:21:24.04:636,24,0	1/1:1,13:16:24.08:728,24,0	1/1:7,20:27:60.15:1731,60,0	1/1:3,21:26:51.02:1406,51,0	1/1:1,14:16:42.14:1262,42,0
chr10	9891448	.	C	CCAT	5187.16	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-12.497;DP=748;FS=6.584;HRun=0;HaplotypeScore=181.7839;InbreedingCoeff=0.9992;MQ=81.23;MQ0=0;MQRankSum=-4.290;QD=61.03;ReadPosRankSum=1.500;VQSLOD=5.3677;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:93:0,93,1404	0/0:13,0:13:39.13:0,39,650	0/0:19,0:19:51.17:0,51,886	0/0:21,0:21:57.12:0,57,896	0/0:26,0:26:78.26:0,78,1309	1/1:6,20:26:69.24:1585,69,0	1/1:1,26:28:78.27:1817,78,0	0/0:24,0:24:72.21:0,72,1207	1/1:2,27:31:78.27:1785,78,0	0/0:25,0:25:71.80:0,72,1125	0/0:29,0:29:78.27:0,78,1327	0/0:26,0:26:72.24:0,72,1205	0/0:31,0:31:93.10:0,93,1512	0/0:30,0:30:90.31:0,90,1530	0/0:32,0:32:96.33:0,96,1613	0/0:24,0:24:69.24:0,69,1173	0/0:26,0:25:75.26:0,75,1274	0/0:20,0:20:51.17:0,51,868	0/0:26,0:26:75.26:0,75,1289	0/0:30,0:30:90.29:0,90,1550	0/0:24,0:24:72.23:0,72,1235	0/0:46,0:46:99:0,135,2345	0/0:23,0:23:69.22:0,69,1185	0/0:29,0:29:87.29:0,87,1501	0/0:29,0:29:81.07:0,81,1279	0/0:38,0:38:99:0,111,1848	0/0:32,0:32:90.22:0,90,1531	0/0:8,0:8:24.08:0,24,408
chr10	9891522	.	G	GA	14967.41	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-7.645;DP=681;FS=0.674;HRun=7;HaplotypeScore=77.5526;InbreedingCoeff=0.9680;MQ=72.56;MQ0=0;MQRankSum=-1.607;QD=31.44;ReadPosRankSum=3.769;VQSLOD=4.6619;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,27:30:78.24:942,78,0	1/1:0,13:13:33.10:399,33,0	0/0:14,0:14:34.21:0,34,312	0/0:14,0:13:3.13:0,3,169	1/1:2,27:29:78.15:908,78,0	1/1:6,22:28:63.19:761,63,0	1/1:2,19:21:51.11:600,51,0	0/0:35,0:35:75.11:0,75,724	1/1:4,18:22:57.17:689,57,0	1/1:3,39:42:99:1377,114,0	1/1:3,27:30:81.21:962,81,0	1/1:2,24:26:72.22:870,72,0	1/1:2,24:26:69.21:834,69,0	1/1:1,20:21:60.18:725,60,0	1/1:1,31:32:90.28:1087,90,0	1/1:2,19:21:54.17:652,54,0	1/1:1,17:18:45.14:544,45,0	1/1:1,25:26:57.17:686,57,0	0/0:31,0:31:78.10:0,78,749	0/0:30,0:31:89.18:0,89,846	0/0:16,0:16:45.07:0,45,434	0/0:26,0:26:69.10:0,69,666	0/0:18,0:18:51.08:0,51,490	0/0:20,0:20:54.06:0,54,514	1/1:3,28:31:75.23:906,75,0	1/1:0,24:24:72.22:870,72,0	1/1:4,27:31:84.26:1012,84,0	1/1:0,5:5:12.04:145,12,0
chr10	9892042	.	T	TA	14718.93	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=-16.155;DP=750;FS=7.970;HRun=5;HaplotypeScore=68.4092;InbreedingCoeff=0.9996;MQ=79.79;MQ0=0;MQRankSum=-0.878;QD=34.31;ReadPosRankSum=4.738;VQSLOD=4.9212;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,105,1128	1/1:1,12:13:30.10:395,30,0	0/0:18,0:18:23.51:0,24,354	0/0:19,0:19:47.89:0,48,462	0/0:45,0:45:99:0,126,1354	1/1:0,17:17:45.15:592,45,0	1/1:1,19:20:51.17:671,51,0	0/0:43,0:42:99:0,114,1225	1/1:1,33:34:93.30:1223,93,0	1/1:0,37:37:99:1427,111,0	1/1:3,30:33:87.24:1125,87,0	1/1:0,29:29:81.26:1066,81,0	1/1:5,29:34:81.26:1066,81,0	1/1:1,25:26:72.23:947,72,0	1/1:2,27:29:75.24:987,75,0	1/1:4,25:29:72.23:947,72,0	1/1:5,24:29:72.23:947,72,0	1/1:3,18:21:51.17:671,51,0	0/0:25,0:25:63.13:0,63,667	0/0:22,0:22:63.16:0,63,677	0/0:21,0:21:60.15:0,60,645	0/0:27,0:27:75.18:0,75,806	0/0:27,0:27:81.20:0,81,871	0/0:15,0:15:42.09:0,42,443	0/0:22,0:22:60.14:0,60,638	1/1:3,25:28:75.21:955,75,0	1/1:2,30:32:84.27:1105,84,0	1/1:2,16:18:45.15:592,45,0
chr10	9893774	.	A	AGCTC	31745.77	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=-12.466;DP=797;FS=13.423;HRun=0;HaplotypeScore=118.0857;InbreedingCoeff=0.9988;MQ=73.93;MQ0=0;MQRankSum=-4.632;QD=74.00;ReadPosRankSum=4.588;VQSLOD=6.5245;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:63,0:63:99:0,184,3728	1/1:0,12:13:30.10:868,30,0	0/0:18,0:18:48.98:0,49,858	0/0:13,0:13:38.11:0,38,570	0/0:30,0:30:87.30:0,87,1794	1/1:2,15:20:45.15:1302,45,0	1/1:5,24:29:78.27:2223,78,0	0/0:31,0:31:90.31:0,90,1870	1/1:3,31:36:93.32:2687,93,0	1/1:3,26:34:99:2723,102,0	1/1:1,16:18:38.88:1128,39,0	1/1:0,20:21:60.21:1738,60,0	1/1:2,34:40:99:3022,105,0	1/1:1,30:32:87.30:2517,87,0	1/1:4,32:38:93.32:2683,93,0	1/1:2,24:28:69.24:1951,69,0	1/1:0,25:27:66.23:1911,66,0	1/1:0,20:20:57.20:1651,57,0	0/0:26,0:26:72.23:0,72,1346	0/0:19,0:19:57.20:0,57,1195	0/0:54,0:54:99:0,162,3156	0/0:22,0:22:66.19:0,66,1342	0/0:28,0:28:81.26:0,81,1642	0/0:36,0:36:99:0,102,2139	0/0:28,0:28:78.27:0,78,1618	1/1:4,36:45:99:3344,126,0	1/1:1,17:19:51.18:1477,51,0	1/1:0,8:9:18.06:522,18,0
chr10	9894539	.	ATGTG	A	1630.63	PASS	AB=0.723;AC=18;AF=0.321;AN=56;BaseQRankSum=-0.454;DP=738;FS=8.476;HRun=0;HaplotypeScore=177.3873;InbreedingCoeff=0.5221;MQ=58.07;MQ0=18;MQRankSum=0.178;QD=5.26;ReadPosRankSum=3.358;VQSLOD=1.2840;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:29,14:43:24:348,24,0	0/0:15,0:15:5.59:0,6,99	0/0:36,0:15:3.01:0,3,65	0/0:41,0:26:3.01:0,3,68	1/1:7,7:14:4:135,4,0	0/0:12,0:19:8.60:0,9,72	0/0:26,0:31:27.47:0,27,142	1/1:20,5:25:14.91:174,15,0	0/1:15,0:23:3.11:3,0,99	0/0:28,0:27:29.02:0,29,317	0/0:15,0:15:2.99:0,3,24	0/0:23,0:23:6:0,6,26	0/0:27,0:27:17.81:0,18,240	0/0:25,0:25:19.19:0,19,214	0/0:28,0:28:13.91:0,14,190	0/0:31,0:33:30.15:0,30,382	0/0:29,0:29:9.40:0,9,96	0/0:18,0:18:23.48:0,23,290	1/1:22,2:23:2.15:129,2,0	0/1:8,9:16:3.96:130,0,4	1/1:43,8:46:12.26:337,12,0	1/1:12,0:32:27:238,27,0	1/1:17,0:24:13.56:111,14,0	0/1:13,0:34:34.80:68,0,35	0/1:19,3:22:17.20:137,0,17	0/0:30,0:30:40.81:0,41,678	0/0:18,0:17:11.80:0,12,152	0/0:10,0:9:11.91:0,12,147
chr10	9894577	.	GTATTCA	G	2104.34	PASS	AB=0.851;AC=16;AF=0.286;AN=56;BaseQRankSum=3.800;DP=633;FS=53.475;HRun=0;HaplotypeScore=182.8436;InbreedingCoeff=-0.3926;MQ=48.82;MQ0=19;MQRankSum=-6.338;QD=6.40;ReadPosRankSum=-1.812;VQSLOD=0.4416;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:36:51.56:0,52,1215	0/1:15,1:15:70.90:71,0,599	0/0:43,0:10:9.51:0,10,625	0/0:36,0:13:32.41:0,32,708	0/0:15,0:15:33.10:0,33,792	0/0:26,0:27:30.65:0,31,547	0/0:18,0:18:42.06:0,42,620	0/0:26,0:23:59.10:0,59,1599	0/1:20,0:20:26.07:26,0,301	0/1:13,5:17:99:317,0,823	0/0:8,6:14:15.05:0,15,507	0/1:13,6:19:99:102,0,941	0/1:12,6:18:99:176,0,575	0/1:16,5:21:99:114,0,632	0/1:18,8:26:99:359,0,698	0/1:18,12:30:99:251,0,1096	0/1:13,9:22:53.70:54,0,832	0/1:12,3:15:99:255,0,502	0/0:18,1:16:11.87:0,12,1040	0/0:15,0:14:12.83:0,13,307	0/0:34,0:34:35.91:0,36,1516	0/1:29,0:29:1.49:1,0,692	0/1:13,0:13:17.46:17,0,284	0/1:30,0:30:16.24:16,0,374	0/0:19,0:20:32.77:0,33,712	0/1:23,2:25:99:234,0,1310	0/1:17,2:18:99:217,0,867	0/1:5,3:7:48.19:48,0,258
chr10	9894583	.	ATG	A	904.68	PASS	AB=0.731;AC=5;AF=0.089;AN=56;BaseQRankSum=3.916;DP=638;FS=2.225;HRun=0;HaplotypeScore=160.1553;InbreedingCoeff=0.7504;MQ=49.82;MQ0=13;MQRankSum=-0.247;QD=15.33;ReadPosRankSum=0.233;VQSLOD=3.3346;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:28:54.64:0,55,855	0/0:16,0:15:22.10:0,22,380	0/0:46,0:13:10.71:0,11,533	0/0:39,0:16:33.58:0,34,540	0/0:15,0:15:36.12:0,36,601	1/1:11,15:26:48.84:545,49,0	1/1:6,8:14:23.91:281,24,0	0/0:29,0:26:65.03:0,65,1051	0/1:12,7:19:11.95:207,0,12	0/0:20,0:19:40.62:0,41,580	0/0:13,0:13:15.05:0,15,251	0/0:20,0:20:40.49:0,40,635	0/0:20,0:20:41.79:0,42,588	0/0:21,0:21:34.47:0,34,550	0/0:26,0:26:24.89:0,25,497	0/0:34,0:34:50.35:0,50,881	0/0:23,0:23:39.60:0,40,628	0/0:15,0:15:28.22:0,28,392	0/0:25,0:23:62.87:0,63,873	0/0:14,0:13:18.04:0,18,265	0/0:33,1:34:25.05:0,25,896	0/0:28,0:28:47.20:0,47,541	0/0:12,0:12:21.32:0,21,244	0/0:25,0:25:21.11:0,21,269	0/0:21,0:21:32.95:0,33,546	0/0:26,0:26:40.64:0,41,932	0/0:19,0:18:48.02:0,48,693	0/0:7,0:7:9.50:0,10,151
chr10	9894617	.	CTGTGTGTG	C	471.54	PASS	AC=6;AF=0.111;AN=54;BaseQRankSum=2.797;DP=649;FS=4.541;HRun=0;HaplotypeScore=199.1547;InbreedingCoeff=0.7817;MQ=48.44;MQ0=24;MQRankSum=-3.266;QD=6.37;ReadPosRankSum=-1.400;VQSLOD=2.2577;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:30:32.72:0,33,836	0/0:15,0:15:21.07:0,21,681	./.	0/0:26,0:8:0.47:0,0,1	0/0:21,0:19:12.04:0,12,285	0/0:23,0:23:17.56:0,18,332	0/0:26,0:25:21.54:0,22,560	0/0:27,0:25:17.27:0,17,385	0/0:23,0:23:20.05:0,20,279	0/0:16,0:16:31.65:0,32,839	0/0:16,0:16:15.05:0,15,560	0/0:21,0:22:42.14:0,42,1433	0/0:20,0:19:34.36:0,34,1035	0/0:25,0:25:33.58:0,34,1020	0/0:17,0:23:17.07:0,17,320	0/0:27,0:27:42.14:0,42,1207	0/0:24,0:23:18.95:0,19,523	0/0:12,0:12:22.32:0,22,512	0/0:26,0:22:15.52:0,16,498	0/0:15,0:14:18.06:0,18,654	0/0:36,0:32:30.10:0,30,1005	1/1:23,3:26:18.06:385,18,0	1/1:12,6:19:9.03:195,9,0	1/1:24,4:29:2.59:11,3,0	0/0:20,0:21:3.89:0,4,310	0/0:24,0:24:36.12:0,36,970	0/0:17,0:16:33.10:0,33,947	0/0:13,0:12:24.08:0,24,936
chr10	9895134	.	AAAC	A	11013.43	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=15.931;DP=605;FS=9.401;HRun=0;HaplotypeScore=87.3313;InbreedingCoeff=0.9918;MQ=76.68;MQ0=0;MQRankSum=-5.963;QD=39.33;ReadPosRankSum=4.030;VQSLOD=5.7580;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:69.24:0,69,1480	1/1:0,14:14:39.13:626,39,0	0/0:17,0:17:39.10:0,39,793	0/0:20,0:20:51.17:0,51,1077	0/0:24,0:24:72.25:0,72,1563	0/0:29,0:29:81.28:0,81,1769	0/0:21,0:21:57.18:0,57,1192	0/0:36,0:36:99:0,105,2260	0/0:24,0:24:69.24:0,69,1501	1/1:3,20:23:57.18:893,57,0	1/1:0,20:20:48.12:742,48,0	1/1:0,23:23:60.20:964,60,0	1/1:2,24:26:66.13:1049,66,0	1/1:4,19:23:51.17:816,51,0	1/1:0,25:25:63.21:1011,63,0	1/1:0,20:20:51.17:819,51,0	1/1:4,22:26:54.18:867,54,0	1/1:3,18:21:51.17:820,51,0	0/0:15,0:15:42.14:0,42,904	0/0:19,0:19:54.19:0,54,1171	0/0:9,0:9:27.09:0,27,596	0/0:16,0:16:45.15:0,45,989	0/0:21,0:21:57.20:0,57,1218	0/0:20,0:20:60.21:0,60,1319	0/0:27,0:27:81.28:0,81,1759	1/1:0,24:24:72.21:1106,72,0	1/1:3,26:29:72.25:1157,72,0	1/1:0,6:6:9.03:144,9,0
chr10	9895803	.	T	TA	2421.95	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.301;DP=670;FS=0.987;HRun=5;HaplotypeScore=76.4917;InbreedingCoeff=0.9983;MQ=68.91;MQ0=2;MQRankSum=1.118;QD=33.18;ReadPosRankSum=-0.698;VQSLOD=3.6774;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,110,1165	0/0:13,0:13:39.10:0,39,419	0/0:29,0:24:63.15:0,63,671	0/0:28,0:26:66.88:0,67,692	0/0:15,0:15:39.10:0,39,419	1/1:1,14:15:36.12:474,36,0	1/1:4,38:42:99:1461,114,0	0/0:27,0:27:69.17:0,69,736	1/1:0,16:16:48.16:630,48,0	0/0:29,0:28:69.17:0,69,741	0/0:18,0:18:51.13:0,51,548	0/0:19,0:19:37.31:0,37,474	0/0:29,0:29:63.72:0,64,739	0/0:26,0:26:63.14:0,63,674	0/0:28,0:28:78.18:0,78,831	0/0:24,0:24:72.18:0,72,774	0/0:39,0:39:99:0,108,1151	0/0:26,0:25:66.03:0,66,692	0/0:10,0:10:21.05:0,21,226	0/0:18,0:18:51.13:0,51,548	0/0:28,0:28:75.19:0,75,806	0/0:12,0:12:33.08:0,33,354	0/0:21,0:21:60.15:0,60,645	0/0:35,0:35:99:0,99,1064	0/0:24,0:24:64.40:0,64,680	0/0:21,0:21:54.13:0,54,580	0/0:24,0:24:63.16:0,63,676	0/0:12,0:12:36.09:0,36,387
chr10	9896500	.	C	CCAAA	24863.97	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-15.536;DP=758;FS=7.685;HRun=0;HaplotypeScore=106.1111;InbreedingCoeff=0.9407;MQ=71.86;MQ0=1;MQRankSum=-1.898;QD=49.53;ReadPosRankSum=3.010;VQSLOD=5.5539;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:93.24:0,93,1486	1/1:4,8:12:17.93:335,18,0	0/0:26,0:25:44.79:0,45,664	0/0:30,0:30:5.04:0,5,580	0/0:36,0:36:81.25:0,81,1317	1/1:6,24:31:42.30:1576,42,0	1/1:4,19:24:48.16:1191,48,0	0/0:31,0:31:51.16:0,51,809	1/1:4,30:35:78.27:1934,78,0	1/1:10,27:36:78.27:1820,78,0	1/1:8,14:22:39.13:849,39,0	1/1:4,23:27:69.24:1661,69,0	1/1:6,20:28:63.22:1551,63,0	1/1:7,19:26:0.52:1140,1,0	1/1:8,22:31:51.17:1251,51,0	1/1:2,17:19:48.16:1191,48,0	1/1:3,21:24:57.20:1414,57,0	1/1:9,27:35:76.81:1865,77,0	0/0:23,0:23:30.10:0,30,502	0/0:25,0:25:63.22:0,63,1064	0/0:28,0:28:78.24:0,78,1260	1/1:11,14:25:42.14:923,42,0	1/1:6,14:21:26.88:666,27,0	1/1:5,19:25:39.13:968,39,0	0/0:20,0:20:57.18:0,57,935	1/1:2,29:31:87.28:2025,87,0	1/1:5,26:35:75.25:1826,75,0	1/1:0,11:11:30.10:676,30,0
chr10	9899421	.	GT	G	5545.97	PASS	AB=0.722;AC=44;AF=0.786;AN=56;BaseQRankSum=4.991;DP=448;FS=3.781;HRun=12;HaplotypeScore=48.6656;InbreedingCoeff=0.6798;MQ=74.74;MQ0=0;MQRankSum=-2.409;QD=15.32;ReadPosRankSum=3.904;VQSLOD=5.6726;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,19:25:40.17:422,40,0	1/1:2,6:8:17.92:139,18,0	0/0:15,0:15:26.87:0,27,254	0/0:12,0:12:4.90:0,5,84	1/1:4,19:24:52.74:393,53,0	1/1:6,16:23:0.39:281,0,0	1/1:4,11:15:23.88:186,24,0	0/0:20,1:20:20.78:0,21,334	1/1:5,9:14:26.87:209,27,0	1/1:5,11:16:29.85:230,30,0	1/1:3,8:11:23.90:186,24,0	1/1:1,12:13:35.86:278,36,0	1/1:2,13:15:32.87:255,33,0	1/1:1,12:13:4.67:184,5,0	1/1:2,14:17:7.46:231,7,0	1/1:1,11:12:32.87:255,33,0	1/1:3,19:22:31.84:332,32,0	1/1:6,20:26:56.74:441,57,0	0/1:13,2:15:8.22:8,0,260	0/0:23,0:23:33.83:0,34,508	0/0:14,1:15:12.83:0,13,312	1/1:3,6:9:17.91:139,18,0	1/1:1,13:14:32.87:255,33,0	0/1:2,7:9:12.51:98,0,13	1/1:6,22:28:53.76:418,54,0	1/1:2,12:14:35.86:279,36,0	1/1:2,12:14:32.84:255,33,0	1/1:2,3:5:8.95:70,9,0
chr10	9902966	.	TCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTG	T	5016.33	PASS	AC=28;AF=0.609;AN=46;BaseQRankSum=-2.272;DP=483;FS=6.097;HRun=0;HaplotypeScore=421.8278;InbreedingCoeff=0.6561;MQ=74.92;MQ0=11;MQRankSum=-2.565;QD=20.23;ReadPosRankSum=1.600;VQSLOD=1.7683;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:12.02:0,12,311	1/1:9,0:9:6.02:141,6,0	0/0:26,0:20:18.92:0,19,746	0/0:33,0:21:16.94:0,17,219	0/0:5,0:5:3.01:0,3,45	1/1:14,0:13:6.02:88,6,0	1/1:20,0:19:12.04:321,12,0	0/0:5,0:5:6.02:0,6,386	1/1:13,3:16:2.69:242,3,0	1/1:14,0:14:2.82:26,3,0	./.	1/1:19,0:19:3.01:201,3,0	1/1:19,6:25:2.89:240,3,0	./.	1/1:15,6:21:8.52:483,9,0	1/1:12,4:16:6.02:480,6,0	1/1:24,0:24:24.07:916,24,0	1/1:29,0:29:27.04:1432,27,0	0/0:15,0:13:15.03:0,15,295	0/0:6,0:6:3.48:0,3,46	0/0:32,0:31:19.35:0,19,393	./.	./.	0/0:51,0:51:99:0,117,11543	./.	1/1:20,0:19:2.45:125,2,0	1/1:11,0:11:3.01:162,3,0	1/1:10,0:10:12.03:159,12,0
chr10	9902992	.	T	TATG	1103.29	PASS	AC=20;AF=0.588;AN=34;BaseQRankSum=7.024;DP=211;FS=12.905;HRun=0;HaplotypeScore=53.9958;InbreedingCoeff=0.6170;MQ=44.60;MQ0=48;MQRankSum=-6.434;QD=22.52;ReadPosRankSum=4.044;VQSLOD=2.1866;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:3:3.01:0,3,56	1/1:1,0:1:3.01:42,3,0	0/0:10,0:4:12.04:0,12,224	0/0:19,0:6:8.05:0,8,87	./.	./.	1/1:3,1:3:3.01:53,3,0	0/0:7,0:3:9.03:0,9,168	1/1:3,0:3:2.88:55,3,0	./.	./.	1/1:1,2:3:3.01:54,3,0	1/1:7,0:6:3.01:55,3,0	./.	1/1:6,0:6:6.02:107,6,0	1/1:4,0:4:6.02:109,6,0	1/1:1,6:8:15.05:308,15,0	1/1:2,7:9:20.96:405,21,0	0/0:7,0:3:9.01:0,9,124	./.	0/0:28,0:15:13.81:0,14,209	./.	./.	0/0:62,0:62:99:0,172,3082	./.	./.	1/1:0,2:2:3.01:52,3,0	./.
chr10	9903549	.	GTC	G	2583.02	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-1.480;DP=978;FS=5.170;HRun=0;HaplotypeScore=179.8890;InbreedingCoeff=0.9964;MQ=58.69;MQ0=14;MQRankSum=2.675;QD=20.83;ReadPosRankSum=3.072;VQSLOD=3.9157;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:36:95.84:0,96,1719	0/0:7,0:7:21.07:0,21,360	0/0:24,0:7:19.51:0,20,292	0/0:47,0:18:34.49:0,34,572	0/0:37,0:37:99:0,102,1796	0/0:30,0:30:81.26:0,81,1427	0/0:31,0:31:84.19:0,84,1462	0/0:49,0:48:99:0,137,2303	0/0:25,0:25:75.26:0,75,1354	0/0:43,0:43:99:0,126,2240	0/0:24,0:24:60.68:0,61,1080	0/0:32,0:32:90.68:0,91,1542	0/0:30,0:30:90.29:0,90,1586	0/0:36,0:36:99:0,108,1823	0/0:38,0:38:99:0,102,1856	0/0:33,0:33:96.26:0,96,1676	0/0:54,0:54:99:0,155,2519	0/0:33,0:32:81.21:0,81,1395	0/0:28,0:27:75.24:0,75,1270	0/0:30,0:30:87.21:0,87,1454	0/0:54,0:53:99:0,150,2540	1/1:1,40:39:71:992,71,0	1/1:2,25:26:42.05:601,42,0	1/1:5,51:55:57.95:1133,58,0	0/0:39,0:38:99:0,103,1720	0/0:45,0:45:99:0,132,2378	0/0:23,0:23:63.18:0,63,1068	0/0:26,0:26:78.27:0,78,1406
chr10	9903911	.	AG	A	17109.60	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=12.764;DP=792;FS=1.930;HRun=4;HaplotypeScore=186.5369;InbreedingCoeff=0.9998;MQ=77.60;MQ0=0;MQRankSum=-9.739;QD=32.84;ReadPosRankSum=2.269;VQSLOD=3.0123;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,45:53:99:1685,141,0	1/1:1,10:11:33.10:392,33,0	0/0:27,0:27:72.21:0,72,975	0/0:22,0:22:56.20:0,56,740	1/1:4,21:25:66.17:768,66,0	1/1:1,11:12:33.10:396,33,0	1/1:4,21:25:69.20:816,69,0	0/0:26,0:26:75.25:0,75,1050	1/1:1,18:19:57.17:683,57,0	1/1:1,27:29:84.25:999,84,0	1/1:2,16:18:51.14:598,51,0	1/1:1,33:34:99:1222,102,0	1/1:4,19:23:60.18:719,60,0	1/1:1,23:24:69.21:827,69,0	1/1:5,41:46:99:1535,129,0	1/1:2,34:36:99:1221,102,0	1/1:3,35:38:99:1239,105,0	1/1:3,12:14:33.10:392,33,0	0/0:27,0:27:74.92:0,75,1019	0/0:30,0:30:87.28:0,87,1198	0/0:46,0:46:99:0,135,1891	0/0:35,0:35:99:0,105,1467	0/0:24,0:24:60.20:0,60,838	0/0:34,0:34:96.32:0,96,1344	1/1:3,32:35:93.29:1113,93,0	1/1:6,32:38:99:1187,99,0	1/1:4,26:30:81.23:959,81,0	1/1:0,10:10:30.09:360,30,0
chr10	9903915	.	GT	G	6433.49	PASS	AB=0.992;AC=35;AF=0.625;AN=56;BaseQRankSum=17.292;DP=799;FS=0.000;HRun=1;HaplotypeScore=225.8462;InbreedingCoeff=0.7860;MQ=78.38;MQ0=0;MQRankSum=-10.913;QD=12.28;ReadPosRankSum=5.707;VQSLOD=3.6551;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:52,1:53:88.14:674,88,0	1/1:10,1:11:31.61:190,32,0	0/0:26,0:26:78.21:0,78,1172	0/0:25,0:25:68.90:0,69,964	1/1:24,0:24:58.07:315,58,0	0/1:16,0:16:65.09:108,0,65	1/1:23,0:23:61.04:321,61,0	0/0:25,0:25:75.25:0,75,1178	1/1:20,0:20:32.16:263,32,0	1/1:29,0:29:72.96:369,73,0	1/1:17,1:18:44.96:272,45,0	1/1:37,0:37:29.36:413,29,0	1/1:20,0:20:56.12:286,56,0	1/1:25,0:25:22.60:310,23,0	1/1:43,0:43:99:601,117,0	0/1:38,1:39:7.70:417,0,8	1/1:39,0:39:56.95:449,57,0	1/1:14,0:13:30.68:148,31,0	0/0:26,0:26:77.93:0,78,1190	0/0:31,0:31:93.28:0,93,1397	0/0:49,0:49:99:0,144,2229	0/0:35,0:35:99:0,105,1639	0/0:24,0:24:60.20:0,60,939	0/0:34,0:34:99:0,99,1553	1/1:36,1:37:37.99:430,38,0	1/1:35,0:35:89.20:423,89,0	0/1:31,0:31:11.37:304,0,11	1/1:10,0:10:28.13:140,28,0
chr10	9903954	.	TG	T	21751.70	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=14.884;DP=806;FS=4.143;HRun=2;HaplotypeScore=170.4243;InbreedingCoeff=0.9983;MQ=78.80;MQ0=0;MQRankSum=-10.626;QD=34.69;ReadPosRankSum=5.934;VQSLOD=4.0860;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,49:56:99:1379,111,0	1/1:0,13:13:36.11:466,36,0	0/0:25,0:25:74.77:0,75,988	0/0:29,0:29:84.21:0,84,1113	1/1:0,20:20:54.18:700,54,0	1/1:0,18:18:54.17:689,54,0	1/1:2,28:30:78.19:978,78,0	0/0:20,0:20:51.17:0,51,764	1/1:1,20:21:60.19:778,60,0	1/1:1,32:33:96.28:1228,96,0	1/1:0,21:21:57.01:694,57,0	1/1:2,34:36:99:1307,102,0	1/1:1,23:24:69.22:895,69,0	1/1:0,27:27:75.24:972,75,0	1/1:0,38:38:99:1360,105,0	1/1:0,33:33:93.30:1205,93,0	1/1:1,35:36:99:1344,105,0	1/1:3,15:17:39.13:505,39,0	0/0:22,0:22:63.21:0,63,944	0/0:28,0:28:84.27:0,84,1236	0/0:55,0:55:99:0,166,2466	1/1:0,42:42:99:1596,123,0	1/1:1,23:24:60.20:779,60,0	1/1:0,30:30:84.27:1091,84,0	1/1:1,29:30:87.22:1106,87,0	1/1:2,32:34:90.29:1167,90,0	1/1:2,35:37:98.89:1281,99,0	1/1:2,4:6:18.06:233,18,0
chr10	9905211	.	C	CACACAC	8624.81	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=8.969;DP=722;FS=22.880;HRun=0;HaplotypeScore=201.1040;InbreedingCoeff=0.9563;MQ=43.90;MQ0=41;MQRankSum=-3.919;QD=20.25;ReadPosRankSum=3.062;VQSLOD=3.1067;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:37:45.14:0,45,859	1/1:8,0:7:12.03:169,12,0	0/0:28,0:17:19.90:0,20,198	0/0:28,0:15:17.08:0,17,311	1/1:25,0:23:30.09:641,30,0	1/1:24,0:20:20.40:481,20,0	1/1:21,0:14:9.50:192,10,0	0/0:40,0:39:78.26:0,78,1532	1/1:26,0:23:27.09:525,27,0	1/1:20,0:20:33.11:697,33,0	1/1:30,0:24:27.09:626,27,0	1/1:25,0:21:24.94:406,25,0	1/1:26,0:23:42.05:670,42,0	1/1:27,0:23:21.05:402,21,0	1/1:36,0:30:21.04:452,21,0	1/1:20,0:19:27:535,27,0	1/1:30,0:28:25.14:403,25,0	1/1:13,0:9:18.02:231,18,0	0/0:25,0:25:40.36:0,40,738	0/0:28,0:27:20.99:0,21,406	0/0:20,0:15:25.62:0,26,433	0/0:32,0:30:60.20:0,60,1206	0/0:21,0:21:42.11:0,42,760	0/0:31,0:23:36.12:0,36,694	1/1:34,0:34:24.97:600,25,0	1/1:38,0:33:66.22:1325,66,0	1/1:7,9:17:6.02:108,6,0	1/1:6,0:5:9.03:161,9,0
chr10	9905217	.	CAG	C	1196.43	PASS	AB=0.880;AC=34;AF=0.739;AN=46;BaseQRankSum=1.660;DP=683;FS=10.470;HRun=0;HaplotypeScore=187.2289;InbreedingCoeff=-0.1072;MQ=40.09;MQ0=44;MQRankSum=-1.176;QD=2.28;ReadPosRankSum=0.892;VQSLOD=1.5954;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:41,2:37:51.50:52,0,58	0/1:5,3:7:7.30:27,0,7	./.	./.	./.	1/1:21,0:17:1.30:3,1,0	0/1:15,4:13:0:0,0,0	0/1:38,0:37:9.07:27,0,9	0/1:16,5:20:16.02:61,0,16	1/1:14,2:17:6.02:66,6,0	./.	1/1:18,6:21:14.87:128,15,0	1/1:17,8:22:5.90:187,6,0	./.	0/0:24,9:29:2.60:0,3,10	1/1:17,3:19:0.47:1,0,0	1/1:24,1:23:11.15:68,11,0	0/1:12,2:9:26.25:54,0,26	0/1:24,0:23:0.61:59,0,1	1/1:14,10:23:2.99:33,3,0	1/1:21,0:16:8.98:75,9,0	0/1:32,1:30:38.40:64,0,38	1/1:19,1:20:8.99:88,9,0	1/1:28,4:23:17.98:173,18,0	1/1:28,0:33:0.47:1,0,0	1/1:33,3:31:9.49:99,9,0	0/1:12,1:13:12.01:25,0,12	0/1:5,2:5:16.16:27,0,16
chr10	9905257	.	GAC	G	584.66	PASS	AB=0.986;AC=28;AF=0.609;AN=46;BaseQRankSum=6.142;DP=521;FS=2.252;HRun=0;HaplotypeScore=167.1521;InbreedingCoeff=-0.1621;MQ=30.57;MQ0=50;MQRankSum=-2.805;QD=1.51;ReadPosRankSum=0.120;VQSLOD=2.4189;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:27:1.13:9,0,1	1/1:6,0:5:2.84:14,3,0	./.	./.	./.	1/1:15,0:11:3.27:17,3,0	0/0:16,0:8:1.23:0,1,3	0/0:32,0:31:19.68:0,20,221	0/1:17,0:15:33.08:33,0,45	0/1:13,0:10:30.37:61,0,30	./.	1/1:21,1:17:14.71:90,15,0	1/1:26,0:22:11.29:96,11,0	1/1:18,0:15:7.61:37,8,0	1/1:30,0:23:1.82:5,2,0	0/1:14,0:12:4.16:12,0,4	0/1:22,0:19:6.52:26,0,7	0/1:15,0:10:21.34:21,0,46	0/1:18,0:16:19.30:19,0,103	0/0:26,0:25:29.70:0,30,238	0/1:16,4:15:65.39:65,0,104	0/1:30,0:26:9.55:10,0,42	1/1:13,0:13:4.24:32,4,0	1/1:29,1:19:9.02:34,9,0	./.	0/1:23,0:14:49.42:65,0,49	0/1:15,0:14:26.14:53,0,26	0/1:7,0:6:25.18:26,0,25
chr10	9905279	.	GAGAC	G	468.38	PASS	AB=0.982;AC=11;AF=0.204;AN=54;BaseQRankSum=5.882;DP=547;FS=23.534;HRun=0;HaplotypeScore=182.7948;InbreedingCoeff=-0.1794;MQ=47.74;MQ0=45;MQRankSum=-4.980;QD=2.35;ReadPosRankSum=2.178;VQSLOD=1.3444;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,4:29:11.45:0,11,86	0/0:7,0:5:2.98:0,3,21	0/0:10,0:6:2.68:0,3,40	0/1:25,0:13:20.38:20,0,111	0/0:14,0:10:2.66:0,3,41	0/0:18,0:14:5.18:0,5,28	1/1:10,2:10:8.80:82,9,0	0/0:32,0:30:87.17:0,87,1325	0/1:20,0:18:41.18:41,0,43	0/1:14,0:12:48.59:66,0,49	0/0:21,0:15:5.98:0,6,45	0/1:18,0:14:32.07:71,0,32	0/1:24,0:22:32.71:33,0,73	0/0:16,0:15:0.84:0,1,18	0/0:22,0:18:6.70:0,7,45	0/0:12,0:11:3.56:0,4,26	0/1:22,3:23:24.44:82,0,24	0/1:15,1:11:9.48:9,0,96	0/0:26,0:23:53.42:0,53,854	0/0:26,0:25:51.17:0,51,956	0/0:19,0:16:32.90:0,33,600	0/0:14,15:26:5.96:0,6,45	0/0:6,4:9:2.98:0,3,22	0/0:23,3:15:4.93:0,5,39	./.	0/1:24,0:17:99:123,0,123	0/1:21,0:20:29.23:80,0,29	0/0:10,0:9:12.22:0,12,129
chr10	9905283	.	C	CAG	869.23	PASS	AB=0.908;AC=12;AF=0.222;AN=54;BaseQRankSum=2.723;DP=564;FS=13.755;HRun=0;HaplotypeScore=181.3237;InbreedingCoeff=-0.1301;MQ=51.67;MQ0=42;MQRankSum=-6.308;QD=4.06;ReadPosRankSum=2.322;VQSLOD=2.2206;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:29:11.44:0,11,72	0/0:7,0:6:0.23:0,0,13	0/1:13,0:9:1.09:1,0,35	0/1:29,0:17:6.30:6,0,141	0/0:15,0:11:6:0,6,65	0/0:14,5:15:2.66:0,3,20	1/1:12,1:11:11:131,11,0	0/0:35,0:33:89.88:0,90,1026	0/1:20,2:20:33.33:56,0,33	0/1:12,2:12:32.91:141,0,33	0/0:18,3:15:5.91:0,6,38	0/1:16,2:15:1.81:2,0,31	0/0:21,4:23:12.61:0,13,67	0/1:14,2:15:11.32:46,0,11	0/0:17,4:17:4.37:0,4,34	0/0:11,3:13:10.47:0,10,57	0/1:26,1:25:35.24:77,0,35	0/1:15,1:11:43.06:43,0,52	0/0:26,0:23:54.14:0,54,681	0/0:23,0:23:54.07:0,54,738	0/0:23,0:20:32.99:0,33,410	0/0:27,0:24:5.89:0,6,38	0/0:11,0:10:3.82:0,4,20	0/0:26,0:15:2.94:0,3,19	./.	0/1:19,5:18:86.42:254,0,86	0/1:15,5:19:17.96:249,0,18	0/0:10,0:9:13.39:0,13,91
chr10	9905289	.	CAGAG	C	4490.09	PASS	AB=0.667;AC=38;AF=0.704;AN=54;BaseQRankSum=8.290;DP=566;FS=13.134;HRun=0;HaplotypeScore=177.1097;InbreedingCoeff=0.6173;MQ=58.37;MQ0=40;MQRankSum=-4.621;QD=12.01;ReadPosRankSum=0.973;VQSLOD=3.2336;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:22,10:28:23.73:379,24,0	1/1:4,3:6:6.02:104,6,0	0/0:16,1:11:15.35:0,15,154	0/0:44,0:26:17.31:0,17,321	0/0:14,0:11:8.60:0,9,97	1/1:13,6:15:2.41:51,2,0	1/1:7,7:12:17.74:168,18,0	0/0:37,0:35:81.21:0,81,1224	0/1:11,11:20:34.59:143,0,35	1/1:8,5:12:24.97:388,25,0	1/1:14,4:13:9.03:157,9,0	1/1:10,6:13:10.85:161,11,0	1/1:15,9:22:4.78:270,5,0	1/1:6,10:15:11.91:188,12,0	1/1:10,10:16:4.88:103,5,0	1/1:11,7:17:19.72:327,20,0	1/1:22,4:24:21.54:267,22,0	1/1:13,2:10:0.10:274,0,0	0/0:24,0:21:53.42:0,53,824	0/0:23,0:23:57.19:0,57,1116	0/0:23,0:20:41.94:0,42,793	1/1:21,7:25:5.74:104,6,0	1/1:8,3:10:6.02:105,6,0	1/1:20,5:14:3.48:54,3,0	./.	1/1:14,7:17:33.01:531,33,0	1/1:10,11:20:26.67:428,27,0	0/1:4,4:7:9.32:291,0,9
chr10	9905293	.	G	GAC	4639.39	PASS	AB=0.917;AC=39;AF=0.722;AN=54;BaseQRankSum=8.998;DP=577;FS=9.711;HRun=0;HaplotypeScore=171.6388;InbreedingCoeff=0.6596;MQ=64.71;MQ0=40;MQRankSum=-5.195;QD=12.37;ReadPosRankSum=2.476;VQSLOD=3.9775;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:24,9:29:27:428,27,0	1/1:5,2:6:6.02:111,6,0	0/0:19,0:15:8.55:0,9,141	0/0:48,0:31:33.68:0,34,343	0/0:14,0:11:11.77:0,12,78	1/1:18,2:16:3.30:57,3,0	1/1:15,0:12:17.69:161,18,0	0/0:35,0:33:90.19:0,90,1232	0/1:20,2:20:26.34:166,0,26	1/1:12,2:13:13.64:375,14,0	1/1:15,3:13:9.03:167,9,0	1/1:13,2:12:2.71:154,3,0	1/1:20,3:21:4.54:262,5,0	1/1:14,1:14:12:188,12,0	1/1:19,2:17:5.76:112,6,0	1/1:13,4:16:20.83:324,21,0	1/1:17,9:24:23.54:285,24,0	1/1:11,3:9:0.11:270,0,0	0/0:24,0:22:59.45:0,59,758	0/0:23,0:23:60.08:0,60,875	0/0:23,0:20:45.09:0,45,646	1/1:25,2:24:5.90:111,6,0	1/1:10,2:11:6.02:112,6,0	1/1:21,4:14:2.33:55,2,0	./.	1/1:17,5:18:40.67:569,41,0	1/1:18,3:20:35.42:433,35,0	1/1:6,2:7:18.06:300,18,0
chr10	9905295	.	G	GAC	1659.48	PASS	AB=0.912;AC=34;AF=0.630;AN=54;BaseQRankSum=9.274;DP=573;FS=5.307;HRun=0;HaplotypeScore=184.0599;InbreedingCoeff=0.2530;MQ=65.20;MQ0=38;MQRankSum=-3.052;QD=4.32;ReadPosRankSum=5.171;VQSLOD=2.2879;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:29,3:28:11.12:42,0,11	1/1:7,0:6:5.37:24,5,0	0/0:23,0:16:10.03:0,10,137	0/0:55,0:33:38.22:0,38,493	0/1:13,0:10:15.12:15,0,31	1/1:12,5:16:2.66:10,3,0	0/1:15,3:14:13.74:139,0,14	0/0:33,0:32:93.22:0,93,1274	0/1:20,2:20:62.45:69,0,62	1/1:13,2:14:13.66:220,14,0	1/1:10,3:12:7.11:25,7,0	1/1:11,2:12:9.78:39,10,0	0/1:16,4:19:27.49:27,0,45	1/1:12,2:13:11.29:96,11,0	1/1:15,4:17:7.53:34,8,0	1/1:16,3:18:2.03:41,2,0	0/1:22,3:24:45.98:117,0,46	0/1:12,2:10:1.10:102,0,1	0/0:24,0:22:59.84:0,60,789	0/0:24,0:24:60.08:0,60,891	0/0:24,0:21:48.10:0,48,667	1/1:15,9:21:4.75:16,5,0	1/1:8,4:11:4.97:18,5,0	1/1:22,3:14:1.81:8,2,0	./.	1/1:16,5:18:15.66:367,16,0	1/1:18,3:20:33.20:366,33,0	0/1:8,0:7:9.32:58,0,9
chr10	9905304	.	AGAGGC	A	3930.63	PASS	AB=0.854;AC=42;AF=0.778;AN=54;BaseQRankSum=8.687;DP=572;FS=17.016;HRun=0;HaplotypeScore=195.4787;InbreedingCoeff=0.6400;MQ=70.12;MQ0=11;MQRankSum=-5.125;QD=9.02;ReadPosRankSum=4.544;VQSLOD=1.3292;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:32,0:29:28.20:286,28,0	1/1:7,0:6:8.92:86,9,0	0/0:28,0:19:35.20:0,35,634	0/1:63,2:40:66.51:67,0,1026	0/1:9,4:11:11.19:305,0,11	1/1:17,0:16:2.83:35,3,0	1/1:22,0:20:24.33:177,24,0	0/0:32,0:31:87.24:0,87,2366	1/1:22,0:21:11.17:127,11,0	1/1:14,0:13:23.24:303,23,0	1/1:12,0:12:9.03:103,9,0	1/1:13,0:12:8.67:108,9,0	1/1:22,0:22:21.52:229,22,0	1/1:20,0:20:11.35:141,11,0	1/1:19,0:18:8.81:83,9,0	1/1:20,0:19:21.25:244,21,0	1/1:20,0:20:20.20:196,20,0	1/1:9,0:8:23.91:251,24,0	0/0:19,0:18:51.17:0,51,1443	0/0:28,0:28:78.18:0,78,2213	0/0:24,0:24:66.21:0,66,1894	1/1:22,0:20:5.54:69,6,0	1/1:14,0:13:5.34:68,5,0	1/1:18,0:14:3.48:36,3,0	./.	1/1:22,0:20:35.43:428,35,0	1/1:24,0:24:22.93:329,23,0	1/1:7,0:7:21.06:259,21,0
chr10	9905306	.	AGGC	A	6081	PASS	AB=0.749;AC=40;AF=0.741;AN=54;BaseQRankSum=7.500;DP=567;FS=19.587;HRun=0;HaplotypeScore=175.9994;InbreedingCoeff=0.4712;MQ=71.53;MQ0=9;MQRankSum=-5.238;QD=14.31;ReadPosRankSum=5.280;VQSLOD=3.2849;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:6,24:27:32.23:535,32,0	1/1:1,6:6:9.03:158,9,0	0/0:32,0:22:34.40:0,34,740	0/1:67,1:42:24.76:25,0,970	0/1:8,0:11:51.58:102,0,52	1/1:6,10:16:2.91:53,3,0	1/1:4,18:20:26.94:430,27,0	0/0:36,0:35:93.77:0,94,2034	0/1:3,18:20:1.04:243,0,1	1/1:3,9:13:3.22:540,3,0	1/1:4,7:11:9.03:159,9,0	1/1:2,10:11:8.77:157,9,0	1/1:4,19:23:22.55:418,23,0	1/1:2,18:20:11.41:185,11,0	1/1:3,14:17:9.03:140,9,0	1/1:3,17:19:22.19:417,22,0	1/1:3,17:20:9.59:410,10,0	1/1:2,6:8:24.04:367,24,0	0/0:18,0:18:54.13:0,54,1144	0/0:28,0:28:72.25:0,72,1679	0/0:24,0:24:63.22:0,63,1473	1/1:8,13:19:5.86:106,6,0	1/1:4,9:13:5.53:105,6,0	1/1:6,10:12:3.48:54,3,0	./.	1/1:5,16:20:2.44:682,2,0	0/1:5,19:24:18.18:430,0,18	1/1:0,7:7:21.07:365,21,0
chr10	9907600	.	TA	T	1636.28	PASS	AB=0.930;AC=12;AF=0.214;AN=56;BaseQRankSum=6.823;DP=547;FS=0.908;HRun=11;HaplotypeScore=64.2817;InbreedingCoeff=0.6298;MQ=75.06;MQ0=1;MQRankSum=-0.846;QD=10.04;ReadPosRankSum=3.286;VQSLOD=2.8650;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,37:45:62.21:835,62,0	0/0:6,0:6:18.05:0,18,192	0/1:18,1:14:6.68:7,0,114	0/1:18,0:16:0.21:0,0,135	0/0:1,0:23:52.75:0,53,277	0/0:15,0:15:10.33:0,10,299	0/0:24,0:25:66:0,66,686	0/0:16,0:16:39.09:0,39,405	0/0:18,0:19:47.95:0,48,494	0/0:18,0:18:51.11:0,51,531	0/0:15,0:16:38.14:0,38,372	0/0:7,0:7:12.50:0,13,129	0/1:12,2:15:7.38:7,0,308	0/1:13,2:16:10.06:10,0,287	0/0:20,1:22:35.34:0,35,565	0/0:12,1:13:11.45:0,11,327	0/0:47,0:47:99:0,129,1340	0/0:21,0:21:52.93:0,53,540	0/0:17,0:17:17.55:0,18,377	0/0:13,0:13:33.08:0,33,349	0/0:19,0:19:45.11:0,45,480	1/1:3,15:18:44.94:369,45,0	1/1:2,7:9:20.75:164,21,0	1/1:2,21:23:24.95:411,25,0	0/0:5,0:22:60.35:0,60,347	0/0:24,0:25:62.98:0,63,646	0/0:26,0:28:74.94:0,75,744	0/0:12,0:12:27.07:0,27,288
chr10	9909015	.	CT	C	162.97	PASS	AB=0.928;AC=6;AF=0.107;AN=56;BaseQRankSum=8.942;DP=499;FS=3.231;HRun=2;HaplotypeScore=156.6797;InbreedingCoeff=-0.1717;MQ=50.21;MQ0=5;MQRankSum=-8.119;QD=1.32;ReadPosRankSum=5.145;VQSLOD=-0.4111;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:21,0:21:14.72:15,0,253	0/0:10,0:10:15.01:0,15,213	0/0:10,0:7:1.83:0,2,69	0/0:7,0:4:4.83:0,5,48	0/0:6,0:6:12.51:0,13,144	0/0:8,0:8:17.24:0,17,163	0/0:29,0:28:10.49:0,10,592	0/0:11,0:11:23.95:0,24,255	0/0:29,0:29:35.13:0,35,513	0/0:18,1:19:0.06:0,0,293	0/1:11,0:11:2.36:2,0,112	0/0:21,0:21:54.13:0,54,541	0/0:24,0:24:17.86:0,18,329	0/0:21,0:21:25.70:0,26,290	0/0:21,0:21:48.06:0,48,474	0/0:29,0:28:1.20:0,1,471	0/1:24,3:27:99:168,0,396	0/1:5,3:8:37.86:38,0,43	0/0:15,0:15:27.39:0,27,384	0/0:9,0:7:17.64:0,18,189	0/1:40,0:37:27.21:27,0,607	0/0:17,0:17:15.69:0,16,193	0/0:8,0:8:0.36:0,0,49	0/0:28,0:28:6.08:0,6,232	0/0:25,0:25:9.53:0,10,601	0/0:14,0:14:25.67:0,26,302	0/1:15,1:16:27.16:27,0,239	0/0:15,0:15:22.83:0,23,331
chr10	9909019	.	CCTTA	C	1429.24	PASS	AB=0.940;AC=27;AF=0.482;AN=56;BaseQRankSum=-0.957;DP=455;FS=68.020;HRun=0;HaplotypeScore=171.0059;InbreedingCoeff=-0.4568;MQ=45.64;MQ0=6;MQRankSum=3.473;QD=3.63;ReadPosRankSum=3.217;VQSLOD=0.5477;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:21,0:21:67.28:104,0,67	0/1:6,2:8:26:83,0,26	0/0:7,0:3:6.90:0,7,84	0/1:5,0:2:0:0,0,0	0/1:5,0:5:1.94:11,0,2	1/1:6,0:6:3.96:18,4,0	0/1:29,0:28:18.93:19,0,70	0/0:11,0:11:22.68:0,23,110	0/1:28,0:28:79.04:79,0,248	0/1:11,2:13:52.61:61,0,53	0/1:8,1:9:28.41:39,0,28	0/1:19,0:19:21.14:21,0,71	0/1:17,3:20:18.46:88,0,18	0/1:15,4:19:11.76:117,0,12	0/1:16,3:19:63.43:63,0,77	0/1:24,5:28:17.72:255,0,18	0/1:25,0:25:5.14:5,0,170	0/0:6,0:6:1.40:0,1,72	0/1:17,0:17:22.13:22,0,49	0/1:8,0:6:19.02:19,0,49	0/0:37,0:34:2.43:0,2,240	0/1:14,0:14:4.76:88,0,5	1/1:7,0:7:12.90:88,13,0	0/1:28,0:28:58.21:58,0,86	0/1:21,0:21:4.56:5,0,300	0/1:12,2:14:34.41:92,0,34	0/1:14,2:16:48.82:87,0,49	1/1:10,4:14:11.39:159,11,0
chr10	9909163	.	A	ACATTC	12417.08	PASS	AB=0.882;AC=31;AF=0.554;AN=56;BaseQRankSum=-2.313;DP=634;FS=12.986;HRun=0;HaplotypeScore=232.9039;InbreedingCoeff=-0.3780;MQ=55.25;MQ0=5;MQRankSum=-10.406;QD=22.13;ReadPosRankSum=5.020;VQSLOD=3.2453;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:21,1:30:53.94:1144,54,0	0/1:12,1:13:99:131,0,102	0/0:23,0:15:44.74:0,45,626	0/1:38,0:23:33.83:34,0,427	1/1:12,2:17:41.42:521,41,0	0/1:22,4:26:96.61:637,0,97	0/1:32,1:32:41.71:662,0,42	0/1:16,0:17:87.70:88,0,356	0/1:22,3:26:99:535,0,171	0/1:20,6:26:44.54:803,0,45	0/1:16,5:21:44.53:534,0,45	0/1:22,1:23:99:244,0,179	0/1:22,2:24:99:315,0,282	0/1:18,3:22:99:551,0,177	0/1:13,4:17:89.33:484,0,89	0/1:11,5:16:60.87:590,0,61	0/1:23,0:23:63.96:64,0,178	0/1:16,1:18:70.94:215,0,71	0/0:17,0:16:8.73:0,9,606	0/1:20,0:20:84.67:85,0,674	0/0:32,0:28:47.40:0,47,870	1/1:17,3:21:24.73:684,25,0	1/1:12,2:13:29.91:336,30,0	1/1:11,5:20:44.60:735,45,0	1/1:16,5:23:62.90:1098,63,0	0/1:24,8:32:99:883,0,156	0/1:21,5:26:99:539,0,156	0/1:9,4:13:10.50:507,0,11
chr10	9910315	.	TAC	T	911.87	PASS	AB=0.935;AC=27;AF=0.519;AN=52;BaseQRankSum=2.221;DP=546;FS=0.746;HRun=0;HaplotypeScore=89.9565;InbreedingCoeff=0.4254;MQ=62.42;MQ0=19;MQRankSum=-1.144;QD=3.52;ReadPosRankSum=1.824;VQSLOD=2.0460;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:40,0:40:18.58:19,0,254	1/1:2,2:4:3.01:33,3,0	./.	./.	0/0:14,0:16:3.37:0,3,17	0/0:17,0:16:9.03:0,9,120	0/0:23,0:23:5.78:0,6,69	0/1:29,0:29:4.11:4,0,41	0/0:18,0:25:8.79:0,9,88	1/1:17,0:18:5.83:39,6,0	1/1:7,5:13:14.71:125,15,0	1/1:6,2:9:8.86:79,9,0	0/1:7,4:11:29.61:56,0,30	0/1:8,0:8:16.96:18,0,17	1/1:14,8:21:24.06:260,24,0	1/1:10,3:13:6.02:65,6,0	1/1:12,8:20:11.53:129,12,0	1/1:14,2:16:9.02:97,9,0	0/0:17,0:15:9:0,9,93	0/0:13,0:21:9.02:0,9,107	0/0:24,0:24:14.26:0,14,174	0/0:22,0:22:16.05:0,16,292	0/1:15,1:16:17.46:17,0,161	0/0:39,0:39:54.12:0,54,733	0/0:12,0:11:8.74:0,9,62	1/1:17,0:17:6.30:38,6,0	1/1:10,1:13:5.84:46,6,0	1/1:5,5:10:6.02:65,6,0
chr10	9910320	.	A	ACACACA	460.36	PASS	AB=1.000;AC=14;AF=0.280;AN=50;BaseQRankSum=-0.304;DP=641;FS=2.376;HRun=0;HaplotypeScore=172.7581;InbreedingCoeff=0.2164;MQ=59.54;MQ0=20;MQRankSum=-2.795;QD=2.06;ReadPosRankSum=-3.542;VQSLOD=1.5094;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:15.44:0,15,171	0/0:8,0:7:3.01:0,3,42	./.	./.	0/1:23,0:21:0.02:0,0,1	1/1:18,0:17:5.71:146,6,0	0/1:24,0:24:51.04:64,0,51	0/1:26,0:26:10.06:10,0,16	1/1:27,0:27:0.74:181,1,0	0/0:26,0:26:0.16:0,0,36	0/0:15,0:15:14.84:0,15,209	0/0:17,0:17:8.82:0,9,125	0/0:20,0:20:9:0,9,106	0/0:12,0:12:0.47:0,0,1	0/0:27,0:26:27.09:0,27,377	0/0:18,0:18:6.02:0,6,84	0/0:27,0:27:14.83:0,15,194	0/0:20,0:20:4.29:0,4,72	./.	0/1:22,0:22:11.08:11,0,54	1/1:27,0:27:5.99:66,6,0	0/1:28,0:28:4.94:5,0,210	0/0:19,0:19:14.81:0,15,243	0/0:45,0:45:47.95:0,48,894	1/1:10,5:15:3.01:83,3,0	0/0:18,0:18:0.47:0,0,1	0/0:19,0:19:9.03:0,9,126	0/1:12,0:12:25.83:26,0,75
chr10	9911400	.	GAC	G	1318.72	PASS	AB=0.914;AC=19;AF=0.352;AN=54;BaseQRankSum=-6.500;DP=673;FS=2.194;HRun=0;HaplotypeScore=184.9187;InbreedingCoeff=0.3685;MQ=54.42;MQ0=13;MQRankSum=4.326;QD=4.20;ReadPosRankSum=1.653;VQSLOD=3.0113;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:22.71:0,23,191	0/0:8,0:8:3:0,3,25	./.	0/1:28,0:21:0:0,0,0	0/1:13,4:21:21.77:169,0,22	1/1:16,0:15:2.58:10,3,0	0/0:39,0:38:0.60:0,1,2	1/1:30,3:32:17.25:163,17,0	0/0:27,0:28:12.14:0,12,86	0/0:22,0:21:19.32:0,19,160	1/1:16,0:16:0.76:2,1,0	0/1:26,0:26:3.76:4,0,35	0/1:26,0:26:4.90:5,0,48	0/0:21,0:22:9.02:0,9,65	0/1:26,0:26:5.77:6,0,80	0/0:32,0:32:14.43:0,14,119	0/0:20,0:20:8.54:0,9,45	0/0:23,0:23:7.12:0,7,108	1/1:10,4:13:14.74:133,15,0	0/1:14,12:27:5.59:319,0,6	1/1:20,16:38:44.79:462,45,0	0/0:19,0:19:2.75:0,3,9	0/0:12,0:12:2.98:0,3,22	0/0:25,0:24:1.11:0,1,7	1/1:7,12:19:18.05:201,18,0	0/0:25,0:24:16.72:0,17,201	0/1:23,0:23:0.48:0,0,86	0/0:15,0:15:15.62:0,16,115
chr10	9911424	.	C	CACACACACAT	10525.70	PASS	AB=0.881;AC=33;AF=0.589;AN=56;BaseQRankSum=-5.527;DP=758;FS=22.792;HRun=0;HaplotypeScore=249.2199;InbreedingCoeff=0.3867;MQ=45.84;MQ0=23;MQRankSum=-3.899;QD=19.17;ReadPosRankSum=2.092;VQSLOD=2.6290;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:46,0:45:54.94:477,0,55	1/1:2,13:16:3.88:157,4,0	0/0:28,0:6:15.02:0,15,142	0/0:34,0:12:17.81:0,18,145	0/1:21,0:21:20.61:21,0,513	0/1:13,2:14:28.37:195,0,28	1/1:38,0:37:22.01:212,22,0	0/0:36,0:31:66.84:0,67,571	0/1:31,0:31:52.57:53,0,107	1/1:4,16:24:27.70:931,28,0	0/1:5,13:23:0:1,0,0	1/1:24,4:30:0.94:563,1,0	0/1:6,16:32:7.05:553,0,7	1/1:19,5:25:33.01:644,33,0	1/1:25,6:32:56.29:1236,56,0	1/1:21,9:30:46.88:1196,47,0	1/1:20,2:22:23.93:232,24,0	0/1:25,0:27:0.66:563,0,1	0/0:17,0:16:28.06:0,28,385	0/0:30,0:30:57.59:0,58,966	0/0:46,0:45:91.28:0,91,1431	0/1:21,0:21:5.43:139,0,5	0/1:17,0:17:12.98:39,0,13	1/1:28,0:28:15.25:273,15,0	0/0:18,0:17:33.03:0,33,492	1/1:30,1:31:76.90:1285,77,0	1/1:20,3:23:21.27:890,21,0	1/1:1,10:13:18.06:867,18,0
chr10	9911436	.	C	CATACACACACACAC	8755.57	PASS	AB=1.000;AC=38;AF=0.679;AN=56;BaseQRankSum=-2.013;DP=746;FS=31.909;HRun=0;HaplotypeScore=289.8158;InbreedingCoeff=0.6734;MQ=49.06;MQ0=16;MQRankSum=-1.554;QD=16.97;ReadPosRankSum=1.010;VQSLOD=2.6854;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:45,0:44:40.53:612,41,0	1/1:14,0:14:3.03:108,3,0	0/0:30,0:12:15.02:0,15,143	0/0:33,0:15:17.80:0,18,144	0/1:24,0:24:19.09:19,0,460	1/1:14,0:13:8.52:162,9,0	1/1:38,0:37:21.92:212,22,0	0/0:33,0:29:61.21:0,61,513	0/1:31,0:31:57.27:57,0,107	1/1:22,0:22:36.01:678,36,0	0/0:18,0:18:0.67:0,1,2	1/1:31,0:30:0.94:450,1,0	1/1:28,0:29:0.07:380,0,0	1/1:27,0:27:27.03:466,27,0	1/1:31,0:31:54.84:946,55,0	1/1:28,0:29:48.68:902,49,0	1/1:20,0:20:23.93:232,24,0	1/1:26,0:26:38.26:597,38,0	0/0:17,0:17:26.45:0,26,358	0/0:31,0:31:34.36:0,34,913	0/0:45,0:44:89.61:0,90,1334	1/1:21,0:21:14.51:174,15,0	1/1:5,7:18:5.99:48,6,0	1/1:26,0:25:14.37:340,14,0	0/0:22,0:21:25.74:0,26,451	1/1:32,0:31:76.96:1125,77,0	1/1:23,0:23:37.28:659,37,0	1/1:14,0:14:18.06:591,18,0
chr10	9911530	.	TAC	T	4498.85	PASS	AB=0.849;AC=46;AF=0.885;AN=52;BaseQRankSum=5.430;DP=701;FS=2.873;HRun=0;HaplotypeScore=122.6501;InbreedingCoeff=-0.1626;MQ=56.70;MQ0=10;MQRankSum=1.390;QD=6.87;ReadPosRankSum=4.340;VQSLOD=4.6485;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:37:0.92:17,1,0	1/1:8,1:9:6.01:67,6,0	./.	./.	1/1:11,0:23:14.24:71,14,0	1/1:10,0:21:11.36:56,11,0	1/1:15,0:30:19.88:117,20,0	0/1:34,0:32:26.29:26,0,424	1/1:17,0:29:22.19:106,22,0	1/1:11,11:24:26.68:260,27,0	1/1:16,4:20:24.03:248,24,0	1/1:11,15:26:30.08:333,30,0	1/1:19,9:30:44:434,44,0	1/1:9,16:27:29.75:294,30,0	1/1:7,11:19:29.91:313,30,0	1/1:14,19:35:47.79:494,48,0	0/1:13,12:24:27.85:148,0,28	0/1:13,10:23:21.51:236,0,22	0/1:21,0:21:88.64:89,0,95	0/1:32,4:36:88.25:88,0,683	0/1:36,9:44:99:123,0,518	1/1:7,0:23:25.13:121,25,0	1/1:5,0:14:5.57:28,6,0	1/1:15,0:25:5.28:27,5,0	1/1:11,0:23:17.04:84,17,0	1/1:8,13:21:37.83:392,38,0	1/1:6,16:24:26.77:262,27,0	1/1:4,2:6:6.02:67,6,0
chr10	9912926	.	C	CAAAA	18502.86	PASS	AB=0.772;AC=46;AF=0.821;AN=56;BaseQRankSum=-9.299;DP=546;FS=11.216;HRun=8;HaplotypeScore=109.0665;InbreedingCoeff=0.7635;MQ=80.25;MQ0=1;MQRankSum=-7.606;QD=40.67;ReadPosRankSum=-1.270;VQSLOD=2.2450;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,24:30:60.12:1299,60,0	1/1:3,9:12:24.08:583,24,0	0/0:16,0:16:28.61:0,29,352	0/1:18,0:19:3.66:4,0,435	1/1:9,3:30:74.37:1293,74,0	1/1:5,10:18:36.12:769,36,0	1/1:3,6:11:21.07:479,21,0	0/0:6,0:25:6.82:0,7,36	1/1:1,5:7:18.06:405,18,0	1/1:9,18:28:54.19:1258,54,0	1/1:7,15:24:54.14:1044,54,0	1/1:3,7:12:18.06:442,18,0	1/1:8,15:24:39.12:856,39,0	1/1:3,7:11:27.09:595,27,0	1/1:9,15:27:34.67:760,35,0	1/1:2,16:21:48.08:1026,48,0	1/1:5,25:32:81.28:1878,81,0	1/1:5,8:15:24:488,24,0	0/0:6,0:23:17.17:0,17,132	0/1:4,0:25:25.54:26,0,28	0/0:7,0:27:26.42:0,26,70	1/1:6,10:16:39:826,39,0	1/1:6,10:16:30.08:667,30,0	1/1:1,12:14:30.10:700,30,0	1/1:4,1:12:36.12:668,36,0	1/1:4,14:20:45.15:969,45,0	1/1:6,16:24:48.16:1123,48,0	1/1:1,5:6:15.05:347,15,0
chr10	9913864	.	CTGTG	C	6942.85	PASS	AB=0.986;AC=36;AF=0.667;AN=54;BaseQRankSum=1.279;DP=634;FS=0.000;HRun=0;HaplotypeScore=121.9607;InbreedingCoeff=0.7096;MQ=67.74;MQ0=14;MQRankSum=1.157;QD=17.10;ReadPosRankSum=5.522;VQSLOD=4.3831;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:29:44.35:591,44,0	1/1:10,0:9:14.88:185,15,0	0/0:40,0:24:17.21:0,17,179	0/0:40,0:24:22.98:0,23,292	0/0:16,0:16:1.75:0,2,5	1/1:15,1:16:28.12:538,28,0	1/1:25,0:24:35.93:461,36,0	0/1:25,0:24:11.18:11,0,341	1/1:18,0:18:21.49:477,21,0	1/1:23,0:22:37.35:502,37,0	./.	1/1:12,17:27:5.68:94,6,0	1/1:10,9:16:2.56:46,3,0	1/1:10,13:23:8.90:120,9,0	1/1:18,2:19:35.91:454,36,0	1/1:12,3:14:17.85:247,18,0	0/1:34,0:34:0.57:540,0,1	1/1:24,0:24:36.08:490,36,0	0/0:23,0:23:34.91:0,35,411	0/0:20,0:20:43.99:0,44,683	0/0:59,0:57:80.10:0,80,1081	1/1:12,1:13:14.80:175,15,0	0/0:12,0:12:2.98:0,3,22	1/1:36,0:36:54.35:802,54,0	0/0:11,0:11:0.47:0,0,1	1/1:5,21:26:47.98:648,48,0	1/1:15,1:16:22.89:378,23,0	1/1:3,1:4:12.04:185,12,0
chr10	9913888	.	GTA	G	6733.61	PASS	AB=0.894;AC=46;AF=0.821;AN=56;BaseQRankSum=7.485;DP=702;FS=0.000;HRun=0;HaplotypeScore=122.0577;InbreedingCoeff=0.1864;MQ=49.76;MQ0=29;MQRankSum=3.520;QD=9.83;ReadPosRankSum=0.056;VQSLOD=4.5331;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:35,0:34:62.67:474,63,0	1/1:10,0:9:14.94:116,15,0	0/0:17,0:3:8.58:0,9,49	0/1:22,0:8:20.24:20,0,62	1/1:19,0:19:23.53:181,24,0	1/1:26,0:26:50.69:383,51,0	1/1:29,0:26:47.36:354,47,0	0/1:23,0:22:35.18:35,0,173	1/1:21,0:20:41.70:305,42,0	0/1:30,0:27:2.14:423,0,2	0/1:4,10:13:0:0,0,0	1/1:28,0:27:19.42:139,19,0	1/1:23,0:20:27.44:204,27,0	1/1:21,0:21:20.83:151,21,0	1/1:28,0:27:41.74:317,42,0	1/1:15,0:14:26.42:191,26,0	1/1:40,0:38:39.97:461,40,0	1/1:28,0:28:57.65:476,58,0	0/1:22,0:20:68.63:69,0,133	0/1:23,0:22:44.80:45,0,199	0/1:79,0:76:99:373,0,281	1/1:19,0:18:20.60:148,21,0	0/1:3,9:10:0:0,0,0	1/1:43,0:43:99:760,102,0	1/1:12,0:11:26.96:223,27,0	1/1:37,0:35:26.82:453,27,0	1/1:17,0:17:31.76:281,32,0	1/1:9,0:8:20.81:153,21,0
chr10	9913890	.	ATGTGTGTG	A	3634.42	PASS	AB=1.000;AC=32;AF=0.667;AN=48;BaseQRankSum=-2.211;DP=698;FS=6.629;HRun=0;HaplotypeScore=186.6059;InbreedingCoeff=0.5836;MQ=49.33;MQ0=29;MQRankSum=0.342;QD=8.28;ReadPosRankSum=-1.186;VQSLOD=1.9299;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:33,0:33:3.85:68,4,0	./.	./.	./.	0/0:20,0:20:1.64:0,2,4	1/1:24,1:25:11.33:218,11,0	1/1:30,0:27:20.46:296,20,0	0/0:25,0:24:13.30:0,13,103	1/1:20,0:19:5.60:61,6,0	0/1:30,0:27:63.60:252,0,64	1/1:14,0:13:2.97:20,3,0	1/1:27,0:27:18.05:228,18,0	1/1:23,0:20:22.22:248,22,0	1/1:18,2:21:15.45:269,15,0	1/1:24,1:25:16.61:244,17,0	1/1:12,3:14:14.66:302,15,0	1/1:39,0:37:23.01:381,23,0	1/1:28,0:28:34.13:431,34,0	0/0:21,0:19:11.93:0,12,222	0/0:22,0:21:20.28:0,20,519	0/0:77,0:73:71.50:0,72,1708	0/0:19,0:19:4.41:0,4,12	./.	0/1:44,0:44:41.65:79,0,42	0/0:15,0:14:1.43:0,1,22	1/1:35,0:33:20.43:209,20,0	1/1:16,1:17:14.05:244,14,0	1/1:9,1:8:5.67:85,6,0
chr10	9914732	.	A	AT	1435.33	PASS	AB=0.952;AC=5;AF=0.089;AN=56;BaseQRankSum=-4.183;DP=603;FS=2.732;HRun=8;HaplotypeScore=58.3281;InbreedingCoeff=0.7897;MQ=67.41;MQ0=1;MQRankSum=-0.231;QD=18.64;ReadPosRankSum=1.563;VQSLOD=3.6677;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:81.03:0,81,741	0/0:5,0:5:12:0,12,110	0/0:8,0:7:14.90:0,15,125	0/1:19,1:17:7.46:7,0,169	1/1:5,20:25:57.17:654,57,0	0/0:14,0:14:39.02:0,39,357	0/0:17,0:17:45.01:0,45,407	0/0:40,0:40:87.02:0,87,796	0/0:19,0:19:47.73:0,48,439	0/0:27,0:27:72.03:0,72,657	0/0:27,0:27:57.02:0,57,522	0/0:16,0:16:39.01:0,39,357	0/0:18,0:18:45:0,45,405	0/0:22,0:22:56.99:0,57,514	0/0:26,0:26:72.02:0,72,654	0/0:19,0:19:45.02:0,45,412	0/0:17,0:17:51.03:0,51,467	0/0:12,0:12:21.01:0,21,192	0/0:24,0:23:54.02:0,54,494	0/0:24,0:24:60.02:0,60,549	0/0:32,0:32:78.03:0,78,714	0/0:23,0:23:42:0,42,380	0/0:13,0:13:30.01:0,30,275	0/0:13,0:13:30.01:0,30,274	1/1:3,29:32:78.23:900,78,0	0/0:30,0:30:77.98:0,78,706	0/0:28,0:28:78:0,78,705	0/0:19,0:19:45.02:0,45,412
chr10	9915560	.	GCA	G	5535.57	PASS	AB=0.850;AC=42;AF=0.778;AN=54;BaseQRankSum=3.958;DP=765;FS=6.720;HRun=0;HaplotypeScore=136.9027;InbreedingCoeff=0.3308;MQ=56.82;MQ0=9;MQRankSum=2.330;QD=8.77;ReadPosRankSum=3.079;VQSLOD=4.3728;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:43:31.72:155,32,0	1/1:3,10:13:2.80:34,3,0	./.	0/0:26,0:5:3.01:0,3,30	0/1:28,3:31:42.84:43,0,431	1/1:19,5:25:44.69:424,45,0	1/1:14,18:34:8.31:210,8,0	0/1:27,0:27:1.37:1,0,183	1/1:13,8:22:50.15:434,50,0	1/1:13,16:30:48.80:399,49,0	0/1:7,15:22:10.05:110,0,10	1/1:9,21:30:20.10:435,20,0	1/1:22,4:26:38.66:346,39,0	1/1:8,21:29:23.86:273,24,0	1/1:10,10:20:11.87:117,12,0	1/1:8,15:24:27.38:288,27,0	1/1:29,12:43:71:641,71,0	0/1:11,18:34:18.04:337,0,18	0/1:20,0:19:29.16:29,0,165	0/0:18,1:19:26.97:0,27,280	0/0:63,10:73:63.43:0,63,1492	1/1:8,1:24:17.21:104,17,0	1/1:5,0:18:11.36:56,11,0	1/1:8,0:32:39.65:195,40,0	0/1:24,0:24:19.32:19,0,273	1/1:7,19:26:56.68:525,57,0	1/1:7,13:22:25.78:265,26,0	1/1:3,1:7:11.70:96,12,0
chr10	9915595	.	TAC	T	785.41	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=3.395;DP=842;FS=14.256;HRun=0;HaplotypeScore=156.6067;InbreedingCoeff=0.9449;MQ=63.30;MQ0=18;MQRankSum=-0.528;QD=15.71;ReadPosRankSum=1.296;VQSLOD=3.1735;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:43:69.23:0,69,1161	0/0:9,0:9:5.99:0,6,103	0/0:36,0:18:51.11:0,51,833	0/0:36,0:19:36.37:0,36,695	1/1:1,29:30:48.14:630,48,0	0/0:28,0:28:55.07:0,55,904	0/0:36,0:36:66.22:0,66,1124	0/0:30,0:30:81.23:0,81,1350	0/0:35,0:33:90.74:0,91,1421	0/0:31,0:31:81.27:0,81,1347	0/0:21,0:21:27.09:0,27,444	0/0:39,0:39:90.78:0,91,1514	0/0:24,0:24:66.21:0,66,1043	0/0:33,0:32:57.18:0,57,923	0/0:19,0:19:36.02:0,36,554	0/0:21,0:21:41.02:0,41,638	0/0:40,0:39:98.28:0,98,1504	0/0:36,0:36:62.87:0,63,1008	0/0:20,0:17:42.56:0,43,662	0/0:18,0:18:36.12:0,36,610	0/0:89,0:87:99:0,193,3184	0/0:25,0:25:39.13:0,39,632	0/0:26,0:26:36.04:0,36,513	0/0:37,0:37:74.79:0,75,1214	1/1:4,16:20:21.05:276,21,0	0/0:27,0:27:75.26:0,75,1265	0/0:18,0:18:41.91:0,42,647	0/0:12,0:11:27.07:0,27,421
chr10	9920620	.	CT	C	3645.47	PASS	AB=0.776;AC=40;AF=0.714;AN=56;BaseQRankSum=4.812;DP=537;FS=8.319;HRun=14;HaplotypeScore=71.3706;InbreedingCoeff=0.4215;MQ=71.02;MQ0=3;MQRankSum=-0.169;QD=8.56;ReadPosRankSum=3.592;VQSLOD=2.5959;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:7,28:35:17.38:392,0,17	0/1:6,6:12:36.69:47,0,37	0/0:29,0:21:8.24:0,8,109	0/1:18,0:10:3.07:3,0,81	0/0:21,3:24:0.87:0,1,287	0/1:35,3:38:7.27:7,0,529	0/0:24,2:26:15.89:0,16,431	1/1:5,0:21:27.24:93,27,0	0/0:10,1:11:3.48:0,3,175	1/1:5,10:16:6.83:180,7,0	1/1:4,13:17:34.79:245,35,0	0/1:12,5:17:3.56:116,0,4	1/1:1,15:18:45.70:299,46,0	0/1:7,4:11:0.13:118,0,0	1/1:2,10:13:25.79:170,26,0	1/1:2,12:14:31.92:225,32,0	1/1:2,14:16:4.87:178,5,0	1/1:4,19:24:43.64:293,44,0	1/1:5,0:19:30.98:91,31,0	1/1:1,1:16:25.34:85,25,0	1/1:9,0:25:19.79:58,20,0	1/1:5,12:20:18.05:113,18,0	1/1:2,15:17:4.85:178,5,0	1/1:2,15:19:42.75:279,43,0	0/0:19,0:21:41.79:0,42,356	1/1:7,9:16:26.70:185,27,0	1/1:4,14:20:18.16:249,18,0	1/1:0,3:3:5.95:41,6,0
chr10	9922680	.	G	GGACACACACA	2890.30	PASS	AB=0.984;AC=16;AF=0.286;AN=56;BaseQRankSum=3.205;DP=575;FS=13.981;HRun=0;HaplotypeScore=178.7137;InbreedingCoeff=-0.3943;MQ=65.13;MQ0=6;MQRankSum=-6.186;QD=12.04;ReadPosRankSum=-1.608;VQSLOD=1.3640;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:62,0:62:99:0,149,3069	0/1:13,0:13:27.28:186,0,27	0/0:23,0:14:14.02:0,14,179	0/0:32,0:18:22.25:0,22,289	0/0:17,0:17:27.33:0,27,253	0/1:10,0:10:36.92:104,0,37	0/1:27,0:27:52.14:52,0,128	0/0:25,0:24:41.58:0,42,731	0/1:10,0:10:74.80:317,0,75	0/1:14,0:14:99:243,0,110	0/1:12,0:12:27.08:31,0,27	0/1:18,0:18:99:309,0,141	0/1:12,0:12:53.88:195,0,54	0/1:9,4:14:99:113,0,102	0/1:23,0:21:99:514,0,133	0/1:18,0:18:99:228,0,115	0/1:21,0:21:99:109,0,141	0/1:14,0:14:67.20:67,0,179	0/0:14,0:13:33:0,33,475	0/0:20,0:20:42.11:0,42,1017	0/0:39,0:39:86.78:0,87,1752	0/0:13,0:13:29.89:0,30,535	0/0:24,0:24:61.57:0,62,1302	0/0:42,0:42:99:0,105,2091	0/0:24,0:24:49.58:0,50,658	0/1:18,0:18:86.36:252,0,86	0/1:12,0:12:12.92:290,0,13	0/1:4,0:4:37.92:40,0,38
chr10	9922681	.	GAC	G	618.32	PASS	AB=0.915;AC=14;AF=0.259;AN=54;BaseQRankSum=4.330;DP=655;FS=2.153;HRun=0;HaplotypeScore=125.3886;InbreedingCoeff=-0.0384;MQ=61.65;MQ0=6;MQRankSum=-0.007;QD=1.87;ReadPosRankSum=-0.621;VQSLOD=2.3357;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:55,7:62:99:168,0,1079	0/0:7,0:18:11.94:0,12,105	./.	0/1:31,0:17:13.05:13,0,52	1/1:6,0:17:16.01:76,16,0	0/0:6,0:14:3:0,3,26	0/0:19,0:31:5.05:0,5,50	0/1:24,2:25:56.96:57,0,297	0/0:12,0:15:11.76:0,12,95	0/1:11,0:17:4.58:5,0,123	0/0:17,0:17:7.23:0,7,52	0/0:19,0:30:17.58:0,18,137	0/0:12,0:16:12.02:0,12,127	0/0:14,0:15:3:0,3,26	0/0:15,0:27:18.01:0,18,176	0/0:21,0:28:22.82:0,23,206	0/0:17,0:25:5.92:0,6,42	0/0:17,0:19:18.92:0,19,181	0/1:12,2:14:67.21:67,0,77	0/1:16,2:18:28.99:29,0,467	0/1:35,3:38:4.92:5,0,772	0/1:12,1:13:19:19,0,169	0/1:22,2:24:13.94:14,0,677	0/1:36,8:44:99:194,0,701	1/1:8,0:24:25.42:125,25,0	0/0:11,0:19:12.88:0,13,95	0/0:8,0:18:9:0,9,78	0/0:6,0:6:3:0,3,26
chr10	9922827	.	G	GTC	2436.02	PASS	AB=0.941;AC=41;AF=0.788;AN=52;BaseQRankSum=3.626;DP=691;FS=0.000;HRun=0;HaplotypeScore=105.0668;InbreedingCoeff=0.1871;MQ=66.35;MQ0=23;MQRankSum=1.595;QD=4.45;ReadPosRankSum=-1.502;VQSLOD=2.3591;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:29,17:47:2.84:35,3,0	1/1:10,0:10:3.47:26,3,0	./.	0/0:69,0:34:2.92:0,3,20	1/1:18,0:17:8.75:85,9,0	1/1:21,0:21:11.79:83,12,0	1/1:21,0:20:3:26,3,0	1/1:36,0:34:7.20:45,7,0	0/1:12,0:12:5.53:108,0,6	1/1:29,0:28:21.07:176,21,0	0/0:9,0:9:0:0,0,0	1/1:25,0:24:22.67:175,23,0	1/1:15,0:14:7.78:42,8,0	0/1:15,0:26:16.48:23,0,16	1/1:22,0:20:23.89:196,24,0	0/1:22,0:22:0.36:157,0,0	1/1:25,0:24:23:190,23,0	0/1:16,0:15:1.28:126,0,1	1/1:24,0:24:4.25:31,4,0	0/0:11,0:11:8.07:0,8,71	0/1:36,0:36:41.26:41,0,172	1/1:28,0:28:12.05:182,12,0	1/1:18,0:18:8.99:75,9,0	1/1:45,0:42:47.86:388,48,0	1/1:22,0:22:5.84:39,6,0	1/1:19,0:19:20.95:186,21,0	1/1:9,1:10:12.48:127,12,0	./.
chr10	9922866	.	TCACA	T	783.91	PASS	AB=1.000;AC=7;AF=0.135;AN=52;BaseQRankSum=-4.493;DP=576;FS=13.111;HRun=0;HaplotypeScore=127.3370;InbreedingCoeff=0.5976;MQ=47.14;MQ0=22;MQRankSum=1.800;QD=8.25;ReadPosRankSum=0.694;VQSLOD=2.3093;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:48.16:0,48,804	0/0:8,0:8:6.02:0,6,99	./.	./.	0/0:18,0:16:17.95:0,18,268	0/0:19,0:19:8.54:0,9,147	0/0:25,0:23:18.06:0,18,298	0/1:22,0:20:31.61:34,0,32	0/0:16,0:16:14.54:0,15,210	0/0:22,0:21:36.03:0,36,488	0/0:8,0:7:6.02:0,6,100	0/0:20,0:30:8.09:0,8,109	0/0:16,0:15:27.07:0,27,403	0/0:26,0:26:26.94:0,27,410	0/0:26,0:23:24.08:0,24,393	0/0:22,0:22:15.05:0,15,235	0/0:22,0:21:24.97:0,25,392	0/0:19,0:17:3.01:0,3,52	1/1:8,4:10:12:145,12,0	1/1:11,6:16:6.02:74,6,0	1/1:43,0:41:48.16:665,48,0	0/0:26,0:25:6.02:0,6,110	0/0:19,0:19:5.95:0,6,63	0/0:44,0:39:39.13:0,39,668	0/0:22,0:21:21.07:0,21,348	0/0:16,0:16:24.13:0,24,355	0/0:15,0:15:26.26:0,26,346	0/0:6,0:5:14.98:0,15,187
chr10	9925702	.	AAGATAGATAGATAGAT	A	7815.88	PASS	AB=0.595;AC=31;AF=0.596;AN=52;BaseQRankSum=7.081;DP=534;FS=8.549;HRun=0;HaplotypeScore=207.1972;InbreedingCoeff=0.8160;MQ=40.90;MQ0=49;MQRankSum=-6.373;QD=30.89;ReadPosRankSum=0.917;VQSLOD=3.2093;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:26:18.06:0,18,314	1/1:2,2:4:6.02:186,6,0	./.	./.	0/0:9,0:27:24.08:0,24,819	1/1:20,0:19:21.51:348,22,0	1/1:12,0:11:9.49:161,9,0	0/0:34,0:23:24.08:0,24,599	1/1:15,0:20:49.28:865,49,0	1/1:10,16:26:46.37:1446,46,0	1/1:8,11:19:24:501,24,0	1/1:7,5:12:27.09:794,27,0	1/1:3,14:17:17.68:630,18,0	1/1:5,14:19:21.01:609,21,0	1/1:5,15:20:15.05:512,15,0	0/1:8,0:24:55.20:166,0,55	1/1:6,5:11:6.02:243,6,0	1/1:8,1:8:3.90:120,4,0	0/0:16,0:13:18.06:0,18,982	0/0:42,0:39:99:0,102,4006	0/0:13,0:10:9.03:0,9,282	0/0:6,0:21:27.09:0,27,680	0/0:8,0:17:9.03:0,9,200	0/0:30,0:27:21.07:0,21,578	0/0:11,0:25:38.68:0,39,1180	1/1:4,7:11:15.05:451,15,0	1/1:7,11:18:9.03:316,9,0	1/1:5,4:9:12.04:469,12,0
chr10	9925724	.	G	GATGA	1922.94	PASS	AB=0.972;AC=12;AF=0.231;AN=52;BaseQRankSum=1.971;DP=523;FS=7.622;HRun=0;HaplotypeScore=146.6685;InbreedingCoeff=0.2349;MQ=35.67;MQ0=95;MQRankSum=-5.150;QD=11.38;ReadPosRankSum=-0.010;VQSLOD=2.6594;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:21,0:18:62.01:62,0,72	0/0:3,0:2:2.56:0,3,31	./.	./.	0/0:30,0:27:27.05:0,27,292	1/1:17,3:18:39.13:650,39,0	0/1:8,2:10:71.30:248,0,71	0/0:32,0:16:48.11:0,48,699	1/1:21,2:23:54.18:865,54,0	0/1:25,0:23:13.39:13,0,483	0/0:15,0:13:21.94:0,22,233	0/0:12,0:12:19.90:0,20,192	0/0:17,0:17:5.78:0,6,71	0/1:19,0:19:26.60:27,0,57	0/0:18,0:17:3.95:0,4,35	0/0:22,0:20:27.07:0,27,309	0/0:10,0:8:6.02:0,6,69	0/0:10,0:8:8.25:0,8,123	0/0:17,0:10:30.10:0,30,527	0/0:46,0:40:99:0,105,1842	0/0:14,0:7:9.03:0,9,156	0/1:26,0:25:73.54:168,0,74	0/1:18,0:13:26.24:26,0,90	0/0:30,0:26:21.87:0,22,345	0/0:26,0:21:39.56:0,40,461	0/0:11,0:9:24.05:0,24,282	0/0:17,0:16:9.50:0,9,116	1/1:7,0:7:7.23:19,7,0
chr10	9925744	.	GATGA	G	735.71	PASS	AB=0.964;AC=8;AF=0.154;AN=52;BaseQRankSum=0.057;DP=533;FS=29.106;HRun=0;HaplotypeScore=170.1534;InbreedingCoeff=-0.1697;MQ=32.74;MQ0=107;MQRankSum=-3.259;QD=5.04;ReadPosRankSum=-0.077;VQSLOD=0.8800;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:15,7:17:38.82:156,0,39	0/0:6,0:5:10.73:0,11,66	./.	./.	0/0:31,0:27:10.54:0,11,93	0/1:13,0:12:22.86:146,0,23	0/1:9,0:8:58.73:59,0,132	0/0:31,0:18:45.15:0,45,697	0/1:18,1:19:12.96:239,0,13	0/0:29,0:27:41.19:0,41,551	0/0:24,0:20:8.37:0,8,76	0/1:14,0:13:2.20:2,0,42	0/0:23,0:21:26.70:0,27,151	0/0:20,0:19:6:0,6,105	0/0:22,0:21:23.55:0,24,128	0/0:22,0:21:23.92:0,24,130	0/0:10,0:8:7.38:0,7,34	0/0:7,0:6:8.88:0,9,78	0/0:15,0:10:21.07:0,21,463	0/0:38,0:31:82.18:0,82,1851	0/0:13,0:4:8.99:0,9,180	0/1:29,0:28:99:188,0,161	0/1:21,0:14:13.95:29,0,14	0/0:23,0:19:3.84:0,4,121	0/0:30,0:22:10.44:0,10,131	0/1:19,0:16:42.97:43,0,370	0/0:16,0:14:11.30:0,11,77	0/0:5,0:4:2.19:0,2,6
chr10	9925782	.	TGATA	T	1334.05	PASS	AC=14;AF=0.700;AN=20;BaseQRankSum=4.137;DP=457;FS=0.000;HRun=0;HaplotypeScore=130.8392;InbreedingCoeff=0.6330;MQ=26.87;MQ0=143;MQRankSum=0.010;QD=10.93;ReadPosRankSum=4.018;VQSLOD=2.9818;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	1/1:3,7:6:3.01:50,3,0	./.	./.	./.	./.	./.	0/0:35,0:18:32.86:0,33,374	1/1:6,0:17:3:28,3,0	1/1:13,13:21:45.02:643,45,0	./.	1/1:3,10:11:6.02:101,6,0	1/1:9,11:17:8.96:119,9,0	./.	./.	./.	./.	./.	0/0:12,0:5:8.94:0,9,66	./.	./.	./.	./.	./.	./.	1/1:12,11:17:37.68:458,38,0	1/1:6,3:6:5.91:38,6,0	0/0:3,2:3:2.74:0,3,12
chr10	9925827	.	CGATA	C	80.49	PASS	AB=0.889;AC=3;AF=0.115;AN=26;BaseQRankSum=2.322;DP=413;FS=0.000;HRun=0;HaplotypeScore=122.3877;InbreedingCoeff=0.1415;MQ=25.58;MQ0=152;MQRankSum=-2.141;QD=2.87;ReadPosRankSum=2.457;VQSLOD=1.8285;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	./.	./.	./.	0/0:11,0:2:3.01:0,3,73	0/0:11,0:8:2.95:0,3,59	0/1:21,3:18:99:115,0,672	./.	0/0:12,0:9:5.95:0,6,52	0/0:18,0:15:5.96:0,6,54	./.	./.	./.	./.	0/0:9,0:3:5.98:0,6,91	0/0:8,0:1:3.01:0,3,77	0/0:18,0:16:1.88:0,2,4	./.	./.	0/0:21,9:20:0:0,0,0	0/0:10,0:7:2.89:0,3,18	./.	0/0:28,0:14:35.91:0,36,626	0/0:14,0:11:3.01:0,3,48	1/1:3,1:1:3.01:46,3,0
chr10	9925846	.	CAGATAGAT	C	117.78	PASS	AB=0.880;AC=8;AF=0.444;AN=18;BaseQRankSum=-2.388;DP=374;FS=0.000;HRun=0;HaplotypeScore=111.6277;MQ=26.42;MQ0=134;MQRankSum=1.226;QD=1.05;ReadPosRankSum=-1.097;VQSLOD=1.9294;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:2:3.01:73,3,0	./.	./.	./.	./.	./.	./.	./.	1/1:17,0:14:8.91:115,9,0	0/0:18,0:14:6:0,6,56	./.	./.	./.	./.	./.	./.	./.	0/0:10,0:4:5.25:0,5,24	./.	0/1:10,10:19:0:0,0,0	./.	./.	0/1:27,0:20:0:0,0,0	0/0:11,0:8:5.74:0,6,30	./.	0/1:19,0:10:12.15:12,0,26	0/1:14,0:10:0:0,0,0	./.
chr10	9925992	.	G	GAGAC	421.82	PASS	AC=10;AF=1.00;AN=10;DP=88;FS=0.000;HRun=0;HaplotypeScore=35.7210;MQ=16.03;MQ0=48;QD=16.22;VQSLOD=2.6763;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	./.	./.	./.	./.	./.	1/1:1,1:2:2.94:80,3,0	./.	./.	./.	./.	./.	./.	./.	./.	./.	1/1:17,0:6:1.89:4,2,0	./.	./.	./.	./.	./.	1/1:1,1:1:3.01:83,3,0	1/1:0,3:3:8.98:185,9,0	1/1:0,2:2:6.02:137,6,0
chr10	9926428	.	CT	C	79.78	PASS	AC=6;AF=1.00;AN=6;DP=5;FS=0.000;HRun=3;HaplotypeScore=18.8818;MQ=26.49;MQ0=0;QD=19.95;VQSLOD=2.6531;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	1/1:0,1:1:3.01:34,3,0	./.	./.	./.	1/1:0,2:2:6.02:74,6,0	./.	./.	./.	./.	./.	./.	./.	./.	./.	1/1:0,1:1:3.01:37,3,0	./.	./.
chr10	9926594	.	CGATA	C	327.57	PASS	AB=0.875;AC=5;AF=0.313;AN=16;BaseQRankSum=3.279;DP=261;FS=6.160;HRun=0;HaplotypeScore=42.3522;MQ=17.12;MQ0=179;MQRankSum=-1.119;QD=9.36;ReadPosRankSum=0.964;VQSLOD=1.1984;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	./.	./.	./.	./.	./.	1/1:10,5:6:12.04:210,12,0	./.	./.	./.	./.	./.	0/0:5,0:2:0:0,0,0	./.	0/0:10,0:4:6.02:0,6,127	0/0:9,0:7:18.06:0,18,393	0/0:20,0:18:3:0,3,36	0/0:20,0:3:3.01:0,3,33	./.	./.	./.	./.	0/1:12,2:4:96.35:96,0,132	./.	1/1:3,3:3:6.02:109,6,0
chr10	9926653	.	TAG	T	142.68	PASS	AB=0.944;AC=8;AF=0.286;AN=28;BaseQRankSum=3.035;DP=251;FS=5.176;HRun=0;HaplotypeScore=48.1041;InbreedingCoeff=0.2056;MQ=21.96;MQ0=122;MQRankSum=-2.780;QD=2.59;ReadPosRankSum=-1.210;VQSLOD=0.8217;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	1/1:2,4:4:2.99:39,3,0	./.	./.	0/0:10,0:6:3.01:0,3,42	./.	./.	./.	0/0:6,0:4:3.01:0,3,43	0/1:11,3:8:99:114,0,143	./.	./.	./.	./.	./.	0/1:6,0:4:0:0,0,0	0/0:11,0:5:0:0,0,0	0/0:15,0:6:6.02:0,6,115	0/0:18,0:11:33.11:0,33,476	0/0:14,0:14:9.91:0,10,131	0/0:17,0:4:12.04:0,12,178	./.	0/0:9,0:7:3.01:0,3,37	./.	0/1:8,0:5:0.04:0,0,0	0/1:15,1:5:36:36,0,77	./.	1/1:3,1:2:3.01:45,3,0
chr10	9926792	.	A	ATAGATAG	289.07	PASS	AB=0.921;AC=12;AF=0.300;AN=40;BaseQRankSum=2.445;DP=231;FS=15.827;HRun=0;HaplotypeScore=49.2586;InbreedingCoeff=0.4253;MQ=21.57;MQ0=111;MQRankSum=-1.772;QD=3.66;ReadPosRankSum=1.028;VQSLOD=-0.1327;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:2:0:0,0,0	0/0:2,1:2:0:0,0,0	./.	./.	0/0:5,0:4:0:0,0,0	0/1:6,0:5:0:0,0,0	0/0:5,0:2:2.74:0,3,12	0/0:28,0:1:3.01:0,3,84	0/0:3,0:2:0.89:0,1,2	1/1:11,1:7:18.04:194,18,0	0/1:6,2:6:0.02:0,0,0	./.	./.	0/1:5,3:6:0.02:0,0,0	./.	0/0:4,0:2:0:0,0,0	./.	./.	0/0:17,0:12:36.12:0,36,876	0/0:15,0:14:12.04:0,12,244	0/0:10,0:5:2.97:0,3,20	0/1:8,0:7:0:0,0,0	0/0:11,0:7:0:0,0,0	0/1:8,0:4:0:0,0,0	0/1:9,0:7:0.16:0,0,0	1/1:13,1:5:11.11:149,11,0	1/1:6,0:5:0.26:39,0,0	./.
chr10	9926914	.	AGACG	A	825.13	PASS	AB=1.000;AC=11;AF=0.212;AN=52;BaseQRankSum=-6.521;DP=433;FS=58.494;HRun=0;HaplotypeScore=103.3616;InbreedingCoeff=0.6514;MQ=29.30;MQ0=92;MQRankSum=4.437;QD=7.05;ReadPosRankSum=4.178;VQSLOD=-0.1030;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:13:17.53:0,18,119	1/1:5,0:4:1.13:11,1,0	0/0:8,0:1:2.98:0,3,21	./.	./.	0/0:11,0:12:13.13:0,13,48	0/0:14,0:18:24.32:0,24,215	1/1:21,0:17:23.98:228,24,0	0/0:8,0:12:22.83:0,23,209	0/0:23,0:20:32.16:0,32,286	0/0:6,0:4:0:0,0,0	0/0:10,0:12:21.25:0,21,135	0/0:16,0:18:33.62:0,34,207	0/0:16,0:14:16.63:0,17,105	0/0:11,0:11:14.25:0,14,87	0/0:7,0:9:9.24:0,9,80	0/1:9,0:8:4.93:5,0,49	0/0:10,0:6:5.87:0,6,39	1/1:11,7:12:18.02:224,18,0	1/1:20,8:21:25.87:360,26,0	1/1:11,21:28:8.92:150,9,0	0/0:14,0:11:3.15:0,3,15	0/0:13,0:12:1.55:0,2,6	0/0:6,0:6:5.99:0,6,47	0/0:17,0:13:9.01:0,9,84	0/0:17,0:12:26.06:0,26,193	0/0:6,0:10:18.72:0,19,189	0/0:10,0:10:21.71:0,22,144
chr10	9926917	.	C	CGGATGGACGGAT	3905.88	PASS	AB=1.000;AC=33;AF=0.635;AN=52;BaseQRankSum=2.946;DP=415;FS=45.139;HRun=0;HaplotypeScore=129.1400;InbreedingCoeff=0.5643;MQ=30.06;MQ0=78;MQRankSum=-4.701;QD=15.69;ReadPosRankSum=1.638;VQSLOD=0.9717;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:13:8.07:0,8,50	1/1:5,0:4:8.85:144,9,0	0/0:7,0:1:2.98:0,3,21	./.	./.	0/1:12,0:11:3.75:30,0,4	1/1:21,0:19:28.32:314,28,0	0/0:18,0:17:41.86:0,42,470	1/1:13,0:12:23.35:286,23,0	1/1:20,0:17:36.48:303,36,0	0/0:6,0:4:0:0,0,0	1/1:15,0:12:18.52:190,19,0	1/1:21,0:18:10.51:244,11,0	0/1:17,0:13:3.46:69,0,3	1/1:14,0:12:8.51:85,9,0	1/1:9,0:8:20.86:329,21,0	1/1:10,0:8:14.99:344,15,0	1/1:13,0:8:6.02:197,6,0	0/0:17,0:11:26.96:0,27,396	0/0:27,0:20:30.31:0,30,661	0/0:31,0:27:8.95:0,9,266	0/0:11,0:9:0.36:0,0,1	1/1:13,0:11:1.16:10,1,0	1/1:8,0:6:0.47:1,0,0	1/1:1,11:14:9.03:202,9,0	0/1:17,0:13:5.77:322,0,6	1/1:11,0:10:4.94:330,5,0	1/1:15,0:13:22.25:505,22,0
chr10	9926952	.	GTGGA	G	3522.22	PASS	AB=1.000;AC=40;AF=0.800;AN=50;BaseQRankSum=1.637;DP=357;FS=33.652;HRun=0;HaplotypeScore=79.6617;InbreedingCoeff=0.7208;MQ=41.02;MQ0=5;MQRankSum=-0.357;QD=15.05;ReadPosRankSum=0.938;VQSLOD=1.5650;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:7,0:7:0:0,0,0	1/1:3,1:4:5.95:66,6,0	./.	./.	0/1:4,0:3:0:0,0,0	1/1:10,3:11:14.95:175,15,0	1/1:18,6:24:38.77:421,39,0	0/0:26,0:21:11.88:0,12,83	1/1:12,5:17:26.92:336,27,0	1/1:6,1:7:14.89:122,15,0	1/1:6,1:7:5.95:66,6,0	1/1:14,3:17:11.88:119,12,0	1/1:9,5:14:24.08:363,24,0	1/1:12,2:14:11.89:119,12,0	1/1:8,2:10:11.95:139,12,0	1/1:9,6:15:26.95:348,27,0	1/1:13,3:16:23.86:251,24,0	1/1:9,2:11:11.96:140,12,0	0/0:10,0:10:14.90:0,15,239	0/0:26,0:25:50.92:0,51,821	0/0:33,0:32:35.96:0,36,547	1/1:4,0:4:3.01:39,3,0	./.	1/1:5,0:9:5.47:47,5,0	1/1:3,0:3:3:28,3,0	1/1:13,3:15:26.95:325,27,0	1/1:7,1:9:9.03:131,9,0	1/1:10,3:13:23.99:289,24,0
chr10	9927028	.	G	GTT	7067.23	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-0.656;DP=575;FS=0.000;HRun=8;HaplotypeScore=116.4268;InbreedingCoeff=0.9751;MQ=71.09;MQ0=0;MQRankSum=-4.572;QD=13.09;ReadPosRankSum=4.720;VQSLOD=1.6220;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,0:30:67.37:231,67,0	1/1:0,0:5:12.48:43,12,0	0/0:18,0:18:29.95:0,30,294	0/0:17,0:17:33.08:0,33,367	1/1:1,0:17:39.24:169,39,0	1/1:3,0:21:34.29:119,34,0	1/1:2,1:24:42.84:189,43,0	1/1:7,26:34:78.23:1171,78,0	1/1:3,0:21:36.99:128,37,0	1/1:2,1:22:50.43:218,50,0	1/1:1,0:15:27.79:106,28,0	1/1:4,0:19:33.81:115,34,0	1/1:5,0:23:44.28:174,44,0	1/1:2,1:24:32.77:154,33,0	1/1:0,0:27:67.85:243,68,0	1/1:6,0:22:41.74:143,42,0	1/1:4,0:25:47.21:162,47,0	1/1:3,0:17:37.92:142,38,0	1/1:6,13:19:42.13:641,42,0	1/1:1,29:30:80.69:1191,81,0	1/1:4,20:25:57.18:883,57,0	1/1:0,0:11:15.59:57,16,0	1/1:4,0:14:22.92:80,23,0	1/1:2,0:20:27.45:94,27,0	1/1:1,0:19:44.26:197,44,0	1/1:3,0:24:49.02:186,49,0	1/1:1,0:18:39.93:137,40,0	1/1:1,0:12:27.45:94,27,0
chr10	9927779	.	ATGTGTG	A	7138.67	PASS	AB=0.618;AC=39;AF=0.696;AN=56;BaseQRankSum=4.666;DP=713;FS=8.073;HRun=0;HaplotypeScore=174.3800;InbreedingCoeff=0.8449;MQ=62.58;MQ0=9;MQRankSum=-5.278;QD=16.11;ReadPosRankSum=4.415;VQSLOD=3.2582;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:31:21.44:236,21,0	1/1:4,10:15:30.53:555,31,0	0/0:38,0:22:6.02:0,6,142	0/0:45,0:24:18.06:0,18,292	0/0:20,0:23:8.64:0,9,157	1/1:7,0:19:24.08:313,24,0	1/1:23,0:24:22.26:241,22,0	0/0:33,0:33:39.06:0,39,730	1/1:13,0:28:33.02:426,33,0	1/1:10,7:19:27.68:422,28,0	1/1:6,10:16:18.47:302,18,0	1/1:7,11:19:21.07:426,21,0	1/1:12,6:18:15.05:283,15,0	1/1:8,9:17:15.05:304,15,0	1/1:13,9:26:30.10:532,30,0	1/1:14,11:26:36.12:719,36,0	1/1:22,3:25:20.61:487,21,0	1/1:11,4:16:7.54:183,8,0	0/0:23,0:23:37.37:0,37,905	0/0:7,0:18:14.75:0,15,384	0/0:40,0:58:54.13:0,54,1127	1/1:13,0:28:36.07:453,36,0	1/1:10,0:21:11.60:148,12,0	1/1:8,0:22:8.89:126,9,0	0/0:15,0:27:21:0,21,423	1/1:19,2:24:16.29:249,16,0	1/1:17,9:25:27.09:523,27,0	0/1:8,12:21:30.05:212,0,30
chr10	9930009	.	GAC	G	1517.14	PASS	AB=0.962;AC=19;AF=0.339;AN=56;BaseQRankSum=9.937;DP=646;FS=6.731;HRun=0;HaplotypeScore=115.7533;InbreedingCoeff=-0.0597;MQ=69.00;MQ0=1;MQRankSum=-0.915;QD=4.03;ReadPosRankSum=10.557;VQSLOD=0.2158;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:91.98:0,92,641	0/1:5,0:5:6.54:7,0,9	0/0:18,0:17:38.68:0,39,500	0/0:18,0:16:19.32:0,19,248	0/0:21,0:21:16.99:0,17,319	0/1:18,1:19:63.42:63,0,82	1/1:23,0:23:1.92:110,2,0	0/0:21,0:21:57.90:0,58,394	0/1:23,0:23:33.92:92,0,34	0/1:24,0:24:4.90:5,0,178	0/1:24,0:24:66.06:66,0,94	0/1:35,3:39:58.50:282,0,58	0/1:16,2:18:54.04:54,0,163	0/1:20,2:22:28.83:115,0,29	0/1:25,0:25:87.62:88,0,94	0/1:24,1:25:55.91:136,0,56	0/1:35,0:34:29.86:200,0,30	1/1:24,2:26:14.13:165,14,0	0/0:19,0:19:36:0,36,281	0/0:17,0:17:34.23:0,34,340	0/0:19,0:19:25.60:0,26,178	0/0:28,0:28:64.92:0,65,445	0/0:22,0:22:29.06:0,29,216	0/0:38,0:38:87.94:0,88,523	0/0:13,0:13:28.20:0,28,278	0/1:28,1:29:58.31:58,0,176	0/1:24,3:27:70.62:172,0,71	1/1:12,0:12:11.22:73,11,0
chr10	9930012	.	ACC	A	7648.23	PASS	AB=0.685;AC=36;AF=0.643;AN=56;BaseQRankSum=-13.898;DP=644;FS=4.026;HRun=11;HaplotypeScore=99.8811;InbreedingCoeff=0.5369;MQ=73.06;MQ0=1;MQRankSum=-2.396;QD=16.63;ReadPosRankSum=3.799;VQSLOD=3.9140;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:36:24.83:0,25,86	0/1:0,4:5:0.05:56,0,0	0/0:22,0:22:50.09:0,50,494	0/1:21,0:20:23.97:24,0,153	0/1:9,2:21:35.22:35,0,49	1/1:6,13:20:32.80:331,33,0	1/1:1,20:23:47.80:546,48,0	0/0:9,0:20:29.94:0,30,103	1/1:2,18:20:39.08:415,39,0	1/1:8,13:21:39.05:415,39,0	1/1:7,16:23:36.07:383,36,0	1/1:10,28:39:65.24:752,65,0	1/1:9,7:16:18.01:191,18,0	1/1:5,16:22:39.08:415,39,0	1/1:6,19:25:51.09:543,51,0	1/1:4,19:24:48.05:565,48,0	1/1:2,31:33:75.14:853,75,0	1/1:4,22:26:63.15:670,63,0	0/0:11,0:17:0.80:0,1,51	0/1:8,1:16:10:10,0,77	0/0:10,0:21:15.95:0,16,70	0/0:8,1:29:14.66:0,15,131	0/1:6,1:20:11.27:11,0,41	0/0:13,0:38:77.57:0,78,285	0/1:9,1:13:14.83:15,0,73	1/1:11,18:30:54.09:566,54,0	1/1:9,19:28:51.08:542,51,0	1/1:0,11:12:24.01:311,24,0
chr10	9931547	.	CG	C	544.68	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.235;DP=554;FS=1.838;HRun=5;HaplotypeScore=57.5951;InbreedingCoeff=0.9785;MQ=83.28;MQ0=0;MQRankSum=-1.534;QD=23.68;ReadPosRankSum=0.211;VQSLOD=2.5121;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:81.18:0,81,1034	0/0:11,0:11:30.08:0,30,391	0/0:21,0:21:51.10:0,51,672	0/0:18,1:19:18.13:0,18,474	1/1:0,10:10:30.04:326,30,0	0/0:15,0:15:36.12:0,36,491	0/0:31,0:31:84.23:0,84,1084	0/0:24,0:24:66.14:0,66,810	0/0:23,0:23:66.21:0,66,884	0/0:18,0:18:48.11:0,48,623	0/0:6,0:6:12.04:0,12,164	0/0:31,0:31:87.25:0,87,1162	0/0:12,0:12:33.10:0,33,433	0/0:28,0:28:78.23:0,78,1035	0/0:27,0:27:78.24:0,78,1035	0/0:14,0:14:42.13:0,42,559	0/0:34,0:34:99:0,99,1315	0/0:16,0:16:48.02:0,48,591	0/0:13,0:13:30.10:0,30,409	0/0:18,0:18:45.11:0,45,568	0/0:39,0:39:99:0,105,1396	0/0:17,0:17:45.10:0,45,564	0/0:10,0:10:27.09:0,27,368	0/0:25,0:25:75.19:0,75,987	1/1:2,11:13:30.09:340,30,0	0/0:21,0:21:60.16:0,60,797	0/0:15,0:15:39.05:0,39,493	0/0:12,0:12:36.07:0,36,467
chr10	9932556	.	TAC	T	780.53	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=3.926;DP=745;FS=0.000;HRun=0;HaplotypeScore=166.7525;InbreedingCoeff=0.9992;MQ=63.03;MQ0=1;MQRankSum=1.053;QD=12.59;ReadPosRankSum=-0.660;VQSLOD=3.3479;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:60.20:0,60,1030	0/0:17,0:17:48.15:0,48,804	0/0:36,0:28:53.32:0,53,819	0/0:22,0:17:39.11:0,39,579	1/1:5,19:24:27.09:358,27,0	0/0:19,0:19:48.15:0,48,797	0/0:24,0:24:63.21:0,63,1073	0/0:44,0:44:99:0,111,1845	0/0:26,0:26:51.17:0,51,883	0/0:40,0:40:99:0,105,1767	0/0:17,0:17:36.08:0,36,566	0/0:20,0:20:36.04:0,36,535	0/0:29,0:29:66.23:0,66,1140	0/0:22,0:22:42.13:0,42,700	0/0:28,0:28:56.68:0,57,929	0/0:23,0:23:54.18:0,54,927	0/0:27,0:27:54.18:0,54,925	0/0:33,0:33:80.90:0,81,1367	0/0:19,0:19:42.12:0,42,672	0/0:28,0:28:78.25:0,78,1301	0/0:33,0:33:90.31:0,90,1558	0/0:26,0:26:72.25:0,72,1247	0/0:19,0:19:45.15:0,45,774	0/0:28,0:28:51.13:0,51,808	1/1:3,35:38:42.12:544,42,0	0/0:30,0:30:84.28:0,84,1427	0/0:21,0:21:63.22:0,63,1090	0/0:20,0:20:48.14:0,48,795
chr10	9932592	.	TAC	T	419.18	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=2.532;DP=726;FS=0.000;HRun=0;HaplotypeScore=186.7504;InbreedingCoeff=0.9854;MQ=57.82;MQ0=4;MQRankSum=1.909;QD=7.10;ReadPosRankSum=-2.057;VQSLOD=2.9965;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:31.01:0,31,313	0/0:12,0:12:36.12:0,36,623	0/0:32,0:9:17.70:0,18,213	0/0:34,1:17:39.02:0,39,501	1/1:3,17:21:18.05:224,18,0	0/0:19,0:19:51.10:0,51,836	0/0:24,0:24:51.56:0,52,833	0/0:34,0:34:75.24:0,75,1217	0/0:31,0:31:60.17:0,60,983	0/0:30,0:30:81.27:0,81,1375	0/0:12,0:12:27.07:0,27,438	0/0:17,0:17:33.09:0,33,518	0/0:26,0:26:63.22:0,63,1070	0/0:23,0:23:45.15:0,45,760	0/0:29,0:29:56.77:0,57,928	0/0:23,1:24:59.73:0,60,1005	0/0:25,0:25:48.01:0,48,845	0/0:35,0:35:81.38:0,81,1298	0/0:23,0:21:54.16:0,54,864	0/0:20,0:20:48.15:0,48,791	0/0:44,1:45:99:0,126,2072	0/0:23,0:23:43.03:0,43,437	0/0:18,0:18:30.54:0,31,310	0/0:27,0:27:18.51:0,19,187	1/1:4,33:38:24.08:314,24,0	0/0:29,0:28:78.23:0,78,1268	0/0:23,0:23:57.20:0,57,987	0/0:23,0:23:54.18:0,54,923
chr10	9932632	.	TACAC	T	7249.26	PASS	AB=0.652;AC=38;AF=0.679;AN=56;BaseQRankSum=7.662;DP=712;FS=5.787;HRun=0;HaplotypeScore=180.1928;InbreedingCoeff=0.7367;MQ=48.31;MQ0=18;MQRankSum=0.019;QD=17.26;ReadPosRankSum=3.602;VQSLOD=4.2690;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,22:29:9.87:158,10,0	1/1:4,2:5:6.01:77,6,0	0/0:53,0:5:9.03:0,9,131	0/0:43,0:12:25.60:0,26,427	0/0:21,0:21:26.83:0,27,688	1/1:7,15:22:10.63:477,11,0	1/1:7,14:21:6.02:106,6,0	0/0:45,0:45:99:0,120,2753	1/1:4,22:26:32.95:550,33,0	1/1:7,18:25:20.87:794,21,0	0/1:4,6:10:11.86:147,0,12	1/1:7,15:22:19.98:393,20,0	1/1:4,18:22:9.08:369,9,0	1/1:3,17:20:9.78:255,10,0	0/1:10,9:19:16.27:145,0,16	1/1:13,13:26:11.10:507,11,0	1/1:6,17:22:30.10:490,30,0	1/1:18,7:25:31.24:495,31,0	0/0:24,0:21:57.17:0,57,1356	0/0:13,0:13:35.95:0,36,853	0/0:67,0:67:99:0,159,3552	1/1:12,13:25:17.54:299,18,0	1/1:5,8:13:2.52:52,3,0	1/1:6,25:31:19.04:223,19,0	0/0:26,0:25:26.12:0,26,618	1/1:0,21:21:59.84:970,60,0	1/1:7,11:18:28.62:424,29,0	1/1:5,11:16:18.06:318,18,0
chr10	9932656	.	G	GCAC	759.32	PASS	AB=0.880;AC=19;AF=0.339;AN=56;BaseQRankSum=8.904;DP=734;FS=47.298;HRun=0;HaplotypeScore=228.4845;InbreedingCoeff=-0.4082;MQ=44.11;MQ0=28;MQRankSum=-4.367;QD=1.98;ReadPosRankSum=-5.804;VQSLOD=-0.6183;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:22:12.20:0,12,234	1/1:6,0:7:5.31:46,5,0	0/0:64,0:7:21:0,21,264	0/0:54,0:9:11.18:0,11,138	0/0:14,0:18:23.99:0,24,330	0/1:16,0:21:31.65:32,0,314	0/1:16,0:20:76.16:76,0,100	0/0:38,0:38:99:0,114,1854	0/1:20,0:23:27.78:28,0,344	0/1:25,0:26:73:73,0,585	0/1:13,0:13:26.99:27,0,84	0/1:21,0:25:46.95:47,0,253	0/0:24,0:24:2.57:0,3,301	0/1:20,0:22:30.07:30,0,126	0/1:22,0:24:76.79:77,0,78	0/1:16,1:27:99:117,0,249	0/1:21,0:21:27.04:27,0,176	0/1:21,0:23:85.40:85,0,331	0/0:16,0:16:42.12:0,42,714	0/0:16,0:16:48.15:0,48,833	0/0:68,0:68:99:0,184,3255	0/0:18,0:29:6.85:0,7,196	0/1:8,0:12:15.53:16,0,86	0/1:22,0:35:30.97:31,0,72	0/1:21,0:23:43.02:43,0,216	0/1:27,0:26:66.85:67,0,529	0/1:13,0:17:75.69:76,0,147	0/1:14,0:14:23.05:23,0,197
chr10	9938198	.	G	GCTCTCTCTCT	5539.99	PASS	AB=0.835;AC=42;AF=0.840;AN=50;BaseQRankSum=-5.951;DP=758;FS=6.638;HRun=0;HaplotypeScore=271.5203;InbreedingCoeff=0.0929;MQ=68.23;MQ0=13;MQRankSum=0.323;QD=9.10;ReadPosRankSum=5.703;VQSLOD=2.2100;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:32,6:41:18.12:226,0,18	1/1:15,0:14:15.90:393,16,0	./.	./.	1/1:20,0:20:5.70:108,6,0	1/1:20,0:20:8.98:183,9,0	1/1:32,0:30:14.08:294,14,0	0/1:36,0:36:9.66:84,0,10	1/1:24,0:23:5.81:108,6,0	1/1:29,0:28:24.08:828,24,0	1/1:24,0:24:2:25,2,0	1/1:38,0:38:24.68:525,25,0	1/1:20,0:20:17.29:344,17,0	1/1:32,0:32:11.63:280,12,0	1/1:34,0:33:7.17:150,7,0	1/1:33,0:32:8.62:236,9,0	1/1:13,0:11:15.02:444,15,0	1/1:15,0:15:12.06:259,12,0	0/0:15,0:17:4.28:0,4,111	0/1:7,0:16:16.48:16,0,246	0/1:45,0:52:17.36:17,0,332	1/1:26,0:26:1.49:65,1,0	1/1:25,1:26:7.72:143,8,0	0/0:21,12:37:0.43:0,0,2	1/1:18,0:20:17.19:254,17,0	1/1:29,0:27:19.60:467,20,0	1/1:12,0:9:5.97:90,6,0	./.
chr10	9938292	.	G	GCA	1199	PASS	AB=0.576;AC=3;AF=0.054;AN=56;BaseQRankSum=-5.093;DP=792;FS=2.422;HRun=0;HaplotypeScore=104.9876;InbreedingCoeff=0.6232;MQ=59.45;MQ0=20;MQRankSum=-0.687;QD=27.88;ReadPosRankSum=2.309;VQSLOD=5.2154;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:30:53.78:0,54,660	0/0:4,0:5:11.84:0,12,109	0/0:57,0:20:26.70:0,27,266	0/0:60,0:23:44.25:0,44,463	0/1:5,14:18:57.99:448,0,58	0/0:32,0:33:79.81:0,80,965	0/0:24,0:25:50.99:0,51,601	0/0:25,0:25:54.14:0,54,630	0/0:22,0:23:56.99:0,57,661	0/0:29,0:29:69.17:0,69,811	0/0:11,0:11:21.05:0,21,245	0/0:33,0:34:93.10:0,93,1100	0/0:27,0:27:75.20:0,75,890	0/0:22,0:22:45.13:0,45,538	0/0:27,0:27:72.06:0,72,857	0/0:25,0:26:66.04:0,66,784	0/0:35,0:35:92.03:0,92,1108	0/0:34,0:34:90.28:0,90,1096	0/0:10,0:10:15.82:0,16,206	0/0:34,0:36:80.70:0,81,904	0/0:49,0:48:99:0,119,1431	0/0:24,0:25:44.97:0,45,527	0/0:20,0:21:50.99:0,51,601	0/0:45,0:46:94.30:0,94,1116	1/1:2,22:21:54.18:857,54,0	0/0:18,0:19:44.96:0,45,516	0/0:22,0:23:59.99:0,60,685	0/0:9,0:9:20.90:0,21,234
chr10	9939043	.	T	TTGTGTG	5796.56	PASS	AB=0.810;AC=45;AF=0.865;AN=52;BaseQRankSum=-0.453;DP=648;FS=32.377;HRun=0;HaplotypeScore=141.6375;InbreedingCoeff=0.5852;MQ=35.83;MQ0=81;MQRankSum=-4.277;QD=11.59;ReadPosRankSum=-0.394;VQSLOD=2.6414;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:24,5:26:7.27:157,7,0	1/1:7,1:10:12.51:213,13,0	./.	./.	1/1:15,0:16:2.94:18,3,0	1/1:19,0:16:12.04:297,12,0	1/1:24,0:15:9.38:111,9,0	0/0:29,0:24:18.06:0,18,308	1/1:25,0:16:12.04:292,12,0	1/1:17,6:25:29.09:670,29,0	1/1:4,1:9:6.02:135,6,0	1/1:13,3:19:18.06:289,18,0	1/1:11,1:16:7.84:202,8,0	1/1:17,1:16:11.65:249,12,0	1/1:17,6:17:14.65:380,15,0	1/1:13,13:19:15.05:485,15,0	1/1:14,12:21:15.05:403,15,0	1/1:12,5:14:9.17:290,9,0	0/1:12,0:13:6.20:6,0,115	0/0:17,0:17:17.81:0,18,319	0/0:46,0:42:71.43:0,71,1236	1/1:12,8:22:5.15:192,5,0	1/1:13,0:18:5.74:144,6,0	1/1:14,1:17:6.02:156,6,0	1/1:16,1:18:6.02:143,6,0	1/1:14,0:16:30.05:552,30,0	1/1:11,10:20:9.03:174,9,0	1/1:8,0:9:12:238,12,0
chr10	9940866	.	GCCTGCAAGGC	G	26569.27	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=18.727;DP=658;FS=0.964;HRun=0;HaplotypeScore=215.5824;InbreedingCoeff=0.9970;MQ=73.47;MQ0=0;MQRankSum=-19.672;QD=75.27;ReadPosRankSum=4.985;VQSLOD=4.8536;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,105,5133	1/1:1,6:7:18.06:546,18,0	0/0:28,0:28:69.09:0,69,2579	0/0:14,0:14:30.10:0,30,1298	0/0:22,0:22:60.17:0,60,2747	1/1:2,26:28:72.19:2222,72,0	1/1:2,19:21:36.01:944,36,0	0/0:22,0:22:66.21:0,66,3007	1/1:0,30:30:75.22:2357,75,0	1/1:0,22:22:66.22:2077,66,0	1/1:1,14:15:38.68:715,39,0	1/1:2,22:24:63.22:2021,63,0	1/1:2,21:23:57.20:1835,57,0	1/1:1,29:30:69.24:2226,69,0	1/1:1,40:41:99:3379,105,0	1/1:1,27:28:66.23:2152,66,0	1/1:1,14:15:21:603,21,0	1/1:0,13:13:30.10:978,30,0	0/0:21,0:21:60.21:0,60,2848	0/0:23,0:23:57.13:0,57,2459	0/0:38,0:38:99:0,114,5767	0/0:28,0:28:84.27:0,84,3791	0/0:21,0:21:60.21:0,60,3050	0/0:33,0:33:99:0,99,4709	0/0:19,0:19:48.16:0,48,2472	1/1:2,22:24:63.20:1810,63,0	1/1:0,26:26:69.15:2139,69,0	1/1:0,6:6:18.06:565,18,0
chr10	9941363	.	TCACACACACACACA	T	3090.98	PASS	AB=0.712;AC=22;AF=0.440;AN=50;BaseQRankSum=3.460;DP=527;FS=0.740;HRun=0;HaplotypeScore=185.7015;InbreedingCoeff=0.4792;MQ=71.17;MQ0=5;MQRankSum=-4.852;QD=16.98;ReadPosRankSum=3.363;VQSLOD=2.4588;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:40:15.05:0,15,490	1/1:0,4:5:3.01:116,3,0	0/0:35,0:25:24.49:0,24,666	0/0:28,0:23:23.84:0,24,866	0/0:23,0:22:3.01:0,3,166	1/1:10,0:15:6.01:100,6,0	0/1:13,0:23:99:218,0,119	0/0:31,0:30:57.18:0,57,2661	0/1:5,0:20:23.43:289,0,23	1/1:8,3:11:15.05:444,15,0	./.	1/1:11,2:14:9.01:241,9,0	1/1:6,4:10:6.02:233,6,0	1/1:13,2:16:6.02:216,6,0	1/1:8,12:20:3.01:107,3,0	1/1:11,7:17:21.07:687,21,0	0/1:6,4:10:64.18:112,0,64	1/1:2,1:6:6.02:233,6,0	0/0:22,0:21:33.11:0,33,1748	0/0:16,0:16:21.07:0,21,1010	0/0:21,0:20:33.11:0,33,1586	0/0:17,0:19:6.02:0,6,118	0/0:24,0:22:8.23:0,8,438	0/0:20,0:34:15.03:0,15,478	0/0:26,0:27:29.56:0,30,1810	0/1:11,2:12:99:271,0,104	./.	./.
chr10	9941394	.	CAGAGAG	C	864.42	PASS	AB=0.815;AC=7;AF=0.159;AN=44;BaseQRankSum=-5.321;DP=451;FS=4.102;HRun=0;HaplotypeScore=130.7177;InbreedingCoeff=0.6023;MQ=40.36;MQ0=9;MQRankSum=1.920;QD=9.50;ReadPosRankSum=-1.399;VQSLOD=2.5701;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:32:15.05:0,15,351	./.	./.	./.	0/0:18,0:17:9.03:0,9,252	./.	0/0:27,0:24:5.62:0,6,73	1/1:22,6:26:10.64:163,11,0	0/0:22,0:22:12.87:0,13,184	0/0:16,0:15:33.08:0,33,627	0/0:11,0:11:0.47:0,0,1	0/0:9,0:8:7.58:0,8,121	0/0:8,0:8:6.02:0,6,94	0/0:11,0:9:7.84:0,8,134	./.	0/0:18,0:16:18.99:0,19,365	0/0:10,0:9:9.03:0,9,146	0/0:6,0:5:0:0,0,0	0/1:17,5:20:2.11:188,0,2	1/1:14,1:16:5.52:194,6,0	1/1:25,0:23:7.39:440,7,0	0/0:22,0:22:11.07:0,11,211	0/0:18,0:17:9.13:0,9,169	0/0:36,0:35:12.06:0,12,322	0/0:26,0:27:32.56:0,33,741	0/0:13,0:12:22.28:0,22,462	0/0:10,0:9:9.03:0,9,236	./.
chr10	9941396	.	G	GAC	113.99	PASS	AB=1.000;AC=7;AF=0.140;AN=50;BaseQRankSum=1.665;DP=434;FS=1.086;HRun=0;HaplotypeScore=132.3830;InbreedingCoeff=0.3633;MQ=39.85;MQ0=11;MQRankSum=0.874;QD=1.13;ReadPosRankSum=1.219;VQSLOD=2.6555;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:19:8.05:0,8,40	0/0:5,0:5:2.94:0,3,18	./.	0/0:8,0:4:8.79:0,9,64	0/0:14,6:19:7.24:0,7,62	./.	0/0:28,0:25:11.02:0,11,78	0/0:27,0:26:37.96:0,38,310	0/0:21,0:21:3.91:0,4,60	0/0:16,0:15:20.94:0,21,128	0/1:11,0:11:0:0,0,0	0/0:9,0:8:8.78:0,9,53	0/0:8,0:8:5.43:0,5,20	0/0:11,0:9:4.54:0,5,21	0/1:15,0:15:0:0,0,0	0/0:19,0:16:12.05:0,12,100	0/0:12,0:10:10.68:0,11,66	0/0:6,0:5:5.60:0,6,38	0/0:20,0:18:46.39:0,46,298	0/0:16,0:16:16.32:0,16,97	0/0:23,0:22:28.46:0,28,160	0/0:21,0:21:6.44:0,6,46	1/1:18,0:17:5.79:48,6,0	1/1:30,0:29:3.79:21,4,0	0/1:27,0:27:99:148,0,200	0/0:14,0:13:27.06:0,27,154	0/0:10,0:9:4.17:0,4,20	./.
chr10	9941435	.	A	AGAGT	1041.87	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=5.927;DP=522;FS=16.206;HRun=0;HaplotypeScore=136.0413;InbreedingCoeff=0.4409;MQ=66.62;MQ0=9;MQRankSum=-2.975;QD=5.89;ReadPosRankSum=-0.005;VQSLOD=1.8902;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:23:32.87:276,33,0	0/0:9,0:8:14.93:0,15,121	0/0:29,0:16:45.13:0,45,725	0/0:41,0:24:58.52:0,59,965	0/0:13,0:13:29.87:0,30,261	0/0:18,0:16:32.96:0,33,274	0/1:27,0:24:18.23:18,0,105	0/0:23,0:23:61.90:0,62,1069	0/0:17,0:17:5.35:0,5,148	0/1:21,0:21:72.45:72,0,218	0/0:14,0:14:26.98:0,27,227	0/0:18,0:17:6.83:0,7,178	0/0:9,0:9:23.84:0,24,180	0/0:24,0:22:11.68:0,12,191	0/0:23,0:23:39.43:0,39,329	0/0:19,0:18:0.02:0,0,252	0/1:13,0:12:4.20:4,0,142	0/0:8,0:7:17.43:0,17,137	0/0:17,0:17:51.17:0,51,995	0/0:11,0:11:30.10:0,30,586	0/0:25,0:25:63.19:0,63,1154	1/1:21,1:22:19.12:195,19,0	1/1:13,1:13:14.48:200,14,0	1/1:23,2:25:26.58:368,27,0	0/0:19,0:19:31.05:0,31,408	0/1:16,0:15:48.83:49,0,217	0/1:14,0:13:30.11:30,0,135	0/0:8,0:8:23.95:0,24,194
chr10	9941547	.	G	GTGTGTA	5987.21	PASS	AB=0.893;AC=36;AF=0.643;AN=56;BaseQRankSum=0.634;DP=625;FS=36.705;HRun=0;HaplotypeScore=126.8059;InbreedingCoeff=0.6558;MQ=48.39;MQ0=24;MQRankSum=0.703;QD=14.97;ReadPosRankSum=4.525;VQSLOD=2.7290;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:25:30.03:742,30,0	1/1:14,0:14:5.35:46,5,0	0/0:29,0:12:14.95:0,15,131	0/0:32,0:13:20.91:0,21,207	0/1:20,0:20:55.64:76,0,56	0/1:22,0:22:0.17:0,0,0	1/1:19,0:16:20.97:287,21,0	0/0:24,0:23:59.80:0,60,517	1/1:19,0:17:15.35:248,15,0	1/1:21,0:19:45.83:555,46,0	1/1:17,0:17:24.76:329,25,0	1/1:25,0:22:32.19:324,32,0	1/1:22,0:21:38.15:399,38,0	1/1:17,1:15:18.48:247,18,0	0/0:30,1:29:2.74:0,3,13	1/1:19,0:16:2.54:36,3,0	1/1:22,0:22:19.53:476,20,0	1/1:15,0:15:21.28:432,21,0	0/0:17,0:14:30.03:0,30,370	0/0:23,0:23:45.06:0,45,699	0/0:44,0:43:69.41:0,69,848	1/1:18,2:20:14.55:429,15,0	0/0:5,18:23:2.23:0,2,10	1/1:29,1:30:44.82:711,45,0	0/1:24,0:23:8.88:9,0,173	1/1:21,1:19:44.14:466,44,0	1/1:17,0:17:8.71:76,9,0	0/1:1,2:4:2.15:100,0,2
chr10	9941549	.	G	GTGTA	6538.91	PASS	AB=1.000;AC=34;AF=0.607;AN=56;BaseQRankSum=-1.940;DP=613;FS=47.483;HRun=0;HaplotypeScore=109.4709;InbreedingCoeff=0.6978;MQ=46.36;MQ0=24;MQRankSum=0.862;QD=18.68;ReadPosRankSum=5.492;VQSLOD=2.4210;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:31,0:26:27.85:574,28,0	1/1:2,13:16:5.46:64,5,0	0/0:24,0:8:14.95:0,15,131	0/0:30,0:11:20.60:0,21,208	0/1:20,0:20:41.74:42,0,58	0/0:4,16:21:0:0,0,0	1/1:19,0:16:20.93:263,21,0	0/0:25,0:24:59.85:0,60,534	1/1:19,0:17:20.36:251,20,0	1/1:20,1:19:6.18:617,6,0	1/1:16,1:17:27.02:374,27,0	1/1:19,2:18:30.84:414,31,0	1/1:18,3:20:41.98:565,42,0	1/1:19,0:16:19.78:366,20,0	0/0:7,23:28:2.84:0,3,14	1/1:3,15:15:2.75:56,3,0	1/1:21,1:22:37.86:656,38,0	1/1:14,2:16:33.30:653,33,0	0/0:18,0:15:33.01:0,33,351	0/0:23,0:23:45.06:0,45,615	0/0:42,0:41:71.94:0,72,789	1/1:19,1:20:13.10:336,13,0	0/0:25,0:23:2.75:0,3,15	1/1:27,1:28:16.82:579,17,0	0/0:25,0:24:8.98:0,9,182	1/1:18,3:18:44.41:563,44,0	1/1:3,13:17:8.78:115,9,0	0/1:4,0:4:6.30:53,0,6
chr10	9941551	.	G	GTA	4692.63	PASS	AB=1.000;AC=33;AF=0.589;AN=56;BaseQRankSum=0.149;DP=611;FS=60.711;HRun=0;HaplotypeScore=101.4181;InbreedingCoeff=0.5951;MQ=45.46;MQ0=25;MQRankSum=1.309;QD=13.14;ReadPosRankSum=5.623;VQSLOD=2.0863;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:32,1:28:27.27:404,27,0	1/1:16,0:16:5.86:51,6,0	0/0:21,0:6:14.95:0,15,131	0/0:28,0:9:20.81:0,21,208	0/0:20,0:20:13.77:0,14,85	1/1:19,0:19:0.44:0,0,0	1/1:20,0:17:2.75:195,3,0	0/0:25,0:23:62.75:0,63,550	1/1:18,0:16:1.96:191,2,0	0/1:23,0:21:40.76:414,0,41	1/1:19,0:19:27.04:342,27,0	1/1:24,0:20:25.35:287,25,0	1/1:20,0:19:40.27:438,40,0	1/1:19,1:17:20.56:328,21,0	0/0:29,0:27:2.94:0,3,18	1/1:18,0:15:3:36,3,0	1/1:22,1:22:23.33:468,23,0	1/1:16,0:16:29.52:423,30,0	0/0:17,0:14:32.47:0,32,302	0/0:22,0:22:44.89:0,45,513	0/0:42,0:41:71.30:0,71,682	1/1:19,0:19:3.16:209,3,0	0/0:25,0:23:2.76:0,3,18	0/1:28,0:28:7.19:435,0,7	0/0:25,0:24:26.93:0,27,218	1/1:20,0:17:41.03:365,41,0	1/1:16,1:17:8.56:81,9,0	0/1:4,0:4:10.99:26,0,11
chr10	9941576	.	T	TGAGAGA	3215.50	PASS	AB=1.000;AC=34;AF=0.654;AN=52;BaseQRankSum=-1.798;DP=579;FS=0.831;HRun=0;HaplotypeScore=149.2248;InbreedingCoeff=0.6168;MQ=42.07;MQ0=21;MQRankSum=-0.456;QD=8.55;ReadPosRankSum=0.659;VQSLOD=2.5733;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:34,0:28:17.05:285,17,0	1/1:11,0:11:3.01:70,3,0	./.	0/0:10,0:2:3.01:0,3,59	0/1:24,0:24:0.94:70,0,1	0/0:19,0:19:8.68:0,9,128	0/0:19,0:17:11.43:0,11,189	0/0:25,0:24:31.70:0,32,452	0/0:15,0:14:18.06:0,18,319	0/1:20,0:17:25.37:318,0,25	./.	1/1:19,0:17:8.24:148,8,0	1/1:15,0:14:6.91:127,7,0	1/1:22,0:20:3.48:93,3,0	1/1:25,0:23:3.48:80,3,0	1/1:23,0:20:9.02:180,9,0	1/1:26,0:23:3.56:251,4,0	1/1:17,0:17:8.92:173,9,0	0/0:17,0:13:15.02:0,15,217	0/0:24,0:26:17.38:0,17,275	0/0:33,0:33:23.83:0,24,372	1/1:19,0:19:7.84:154,8,0	1/1:30,0:28:9.49:136,9,0	1/1:30,1:31:23.71:452,24,0	1/1:22,0:21:15.05:371,15,0	1/1:17,0:15:22.34:284,22,0	1/1:12,0:11:3.01:60,3,0	1/1:5,0:5:9.02:144,9,0
chr10	9941648	.	GATAGATAGATAGATAGATAA	G	1766.97	PASS	AB=0.994;AC=25;AF=0.446;AN=56;BaseQRankSum=2.357;DP=553;FS=1.768;HRun=0;HaplotypeScore=238.1513;InbreedingCoeff=-0.1445;MQ=51.24;MQ0=10;MQRankSum=1.177;QD=4.48;ReadPosRankSum=0.382;VQSLOD=2.7773;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:24:48.47:102,0,48	0/1:13,0:13:19.35:59,0,19	0/0:12,0:6:17.79:0,18,145	0/0:14,0:5:15.01:0,15,143	1/1:4,11:15:2.88:38,3,0	0/1:19,0:18:38.43:38,0,1547	0/1:27,0:26:80.40:80,0,929	0/0:33,0:28:48.11:0,48,620	0/0:18,0:17:15.03:0,15,357	0/1:20,0:19:99:183,0,110	0/1:13,0:13:32.97:33,0,165	0/1:24,1:25:42.63:245,0,43	0/1:21,0:20:87.22:112,0,87	0/0:29,0:29:15.42:0,15,210	1/1:17,0:16:13.29:144,13,0	0/1:28,0:28:54.52:55,0,185	1/1:22,0:18:11.30:93,11,0	0/1:10,0:10:62.91:63,0,99	0/0:14,0:14:26.65:0,27,347	0/0:29,0:29:39.42:0,39,483	0/0:10,0:10:20.94:0,21,178	1/1:20,0:20:2.96:19,3,0	1/1:14,0:14:17.82:151,18,0	0/1:20,1:21:12.92:13,0,34	0/1:33,0:32:29.69:30,0,255	0/1:16,0:16:74.16:274,0,74	0/1:30,0:29:10.09:193,0,10	0/1:5,0:5:18.49:18,0,23
chr10	9941652	.	GATAGATAGATAGATAA	G	5001.41	PASS	AB=0.942;AC=36;AF=0.643;AN=56;BaseQRankSum=4.419;DP=543;FS=3.039;HRun=0;HaplotypeScore=199.9202;InbreedingCoeff=0.1283;MQ=52.21;MQ0=9;MQRankSum=-0.169;QD=10.85;ReadPosRankSum=4.477;VQSLOD=3.5707;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:22,1:22:4.90:407,0,5	1/1:1,11:12:2.71:132,3,0	0/0:9,0:8:23.85:0,24,206	0/0:13,0:7:14.18:0,14,175	1/1:15,0:15:2.94:18,3,0	0/1:18,0:17:84.85:85,0,1206	0/1:28,0:27:99:125,0,536	0/0:30,0:25:51.06:0,51,482	0/0:18,0:17:8.99:0,9,113	0/1:17,0:17:5.11:263,0,5	1/1:11,1:12:10.17:202,10,0	1/1:6,21:27:15.05:405,15,0	0/1:2,19:20:12.94:296,0,13	0/1:28,1:29:17.27:42,0,17	1/1:18,0:16:17.39:337,17,0	0/1:27,1:28:38.72:134,0,39	1/1:23,0:20:23.94:227,24,0	0/1:10,0:10:20.06:137,0,20	0/1:17,0:17:33.35:33,0,235	0/1:29,0:29:97.82:98,0,287	0/0:12,0:12:2.95:0,3,176	1/1:2,17:19:3.01:37,3,0	1/1:12,1:13:21.01:251,21,0	1/1:20,0:20:9.73:117,10,0	1/1:13,20:33:20.10:334,20,0	1/1:2,15:17:44.93:707,45,0	1/1:2,26:28:15.44:501,15,0	1/1:4,0:4:12:114,12,0
chr10	9941656	.	GATAGATAGATAA	G	4834.96	PASS	AB=1.000;AC=41;AF=0.732;AN=56;BaseQRankSum=5.387;DP=537;FS=0.000;HRun=0;HaplotypeScore=174.1558;InbreedingCoeff=0.5894;MQ=53.32;MQ0=6;MQRankSum=-1.037;QD=11.30;ReadPosRankSum=5.140;VQSLOD=3.5672;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:21:15.12:371,15,0	1/1:12,0:12:2.89:87,3,0	0/0:10,0:9:26.87:0,27,237	0/0:11,0:8:17.19:0,17,211	1/1:14,0:14:2.94:18,3,0	0/1:17,0:16:99:107,0,855	0/1:28,0:27:99:163,0,193	0/0:28,0:23:60.07:0,60,566	0/1:18,0:18:3.85:34,0,4	1/1:2,16:18:35.86:463,36,0	1/1:12,2:14:29.94:416,30,0	1/1:26,0:26:14.98:274,15,0	1/1:21,0:20:9.03:199,9,0	1/1:8,22:30:8.36:170,8,0	1/1:17,0:15:16.49:240,16,0	1/1:9,21:30:5.70:167,6,0	1/1:19,0:17:23.86:185,24,0	1/1:9,1:10:20.86:254,21,0	0/0:18,0:18:25.95:0,26,323	0/0:30,0:30:4.59:0,5,337	0/0:12,0:12:26.91:0,27,227	1/1:19,0:19:2.92:17,3,0	1/1:13,0:13:20.97:174,21,0	1/1:18,0:18:10.66:58,11,0	1/1:31,2:32:20.90:398,21,0	1/1:17,0:17:44.90:542,45,0	1/1:28,0:28:14.97:342,15,0	1/1:4,0:4:12.01:157,12,0
chr10	9941660	.	GATAGATAA	G	4122.41	PASS	AB=1.000;AC=42;AF=0.750;AN=56;BaseQRankSum=5.996;DP=532;FS=3.694;HRun=0;HaplotypeScore=149.7424;InbreedingCoeff=0.6592;MQ=55.65;MQ0=6;MQRankSum=-0.740;QD=9.89;ReadPosRankSum=5.519;VQSLOD=2.1874;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:20:37.17:344,37,0	1/1:12,0:12:2.63:59,3,0	0/0:11,0:10:29.88:0,30,267	0/0:12,0:9:20.19:0,20,237	1/1:11,0:11:2.94:18,3,0	0/1:17,0:16:99:107,0,473	0/1:27,0:26:35.43:282,0,35	0/0:28,0:23:66.08:0,66,623	1/1:3,14:17:6.02:112,6,0	1/1:18,0:18:35.60:372,36,0	1/1:15,0:15:29.92:311,30,0	1/1:26,0:26:14.91:181,15,0	1/1:21,0:20:8.70:126,9,0	1/1:30,0:30:8.68:116,9,0	1/1:18,0:16:18.11:211,18,0	1/1:28,0:28:6.02:119,6,0	1/1:18,0:16:23.86:185,24,0	1/1:10,0:10:20.85:188,21,0	0/0:22,0:22:55.70:0,56,444	0/0:30,0:30:50.59:0,51,406	0/0:12,0:12:26.94:0,27,227	1/1:18,0:18:2.92:17,3,0	1/1:12,0:12:20.97:174,21,0	1/1:16,0:16:10.20:73,10,0	1/1:32,0:31:20.83:265,21,0	1/1:17,0:17:44.90:462,45,0	1/1:27,0:27:14.97:239,15,0	1/1:6,0:6:17.98:161,18,0
chr10	9944586	.	CA	C	2185.67	PASS	AB=0.950;AC=22;AF=0.393;AN=56;BaseQRankSum=-8.442;DP=473;FS=3.900;HRun=5;HaplotypeScore=78.8298;InbreedingCoeff=-0.1269;MQ=80.70;MQ0=1;MQRankSum=-0.167;QD=6.34;ReadPosRankSum=0.805;VQSLOD=-0.2568;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:24,2:26:15.77:189,0,16	0/1:9,0:9:0.95:58,0,1	0/0:23,0:13:22:0,22,241	0/1:22,1:20:22.92:23,0,175	0/0:17,0:17:45.85:0,46,421	1/1:0,25:25:57.11:645,57,0	1/1:3,19:22:33.09:374,33,0	0/0:11,0:11:27.03:0,27,259	1/1:1,10:11:18.05:203,18,0	0/1:13,1:14:19.81:55,0,20	0/1:7,0:7:14.75:15,0,15	0/1:14,1:15:34.47:53,0,34	0/0:8,0:8:11.22:0,11,35	0/1:13,1:14:11.21:11,0,37	0/1:19,2:21:34.03:104,0,34	0/1:17,1:18:14.78:15,0,52	0/1:29,1:30:62.13:133,0,62	0/1:29,2:31:68.65:113,0,69	0/0:15,0:15:44.67:0,45,388	0/0:12,0:12:33.03:0,33,304	0/0:17,0:17:39.02:0,39,356	0/1:14,1:15:7.26:61,0,7	0/1:9,0:9:29.84:32,0,30	0/1:15,1:16:38:50,0,38	0/0:19,0:19:41.81:0,42,362	0/1:17,2:19:8.68:159,0,9	0/1:18,1:19:26.68:69,0,27	0/0:6,0:6:11.25:0,11,36
chr10	9945133	.	TG	T	2934.12	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.296;DP=804;FS=1.414;HRun=2;HaplotypeScore=76.3526;InbreedingCoeff=0.9971;MQ=88.07;MQ0=0;MQRankSum=-2.272;QD=33.73;ReadPosRankSum=2.801;VQSLOD=4.0044;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:62,0:62:99:0,178,2609	0/0:12,0:12:36.12:0,36,539	0/0:27,0:27:81.05:0,81,1161	0/0:33,0:33:90.28:0,90,1305	0/0:24,0:24:72.23:0,72,1057	1/1:0,33:33:93.30:1207,93,0	1/1:4,30:34:90.29:1168,90,0	0/0:34,0:34:99:0,99,1407	1/1:1,19:20:54.18:701,54,0	0/0:22,0:23:66.22:0,66,974	0/0:23,0:23:69.22:0,69,999	0/0:37,0:37:99:0,111,1662	0/0:36,0:36:99:0,108,1588	0/0:30,0:30:87.29:0,87,1302	0/0:28,0:28:84.28:0,84,1241	0/0:27,0:27:81.27:0,81,1207	0/0:49,0:49:99:0,144,2134	0/0:23,0:23:69.18:0,69,988	0/0:16,0:16:45.14:0,45,651	0/0:25,0:25:69.21:0,69,992	0/0:38,0:38:99:0,111,1618	0/0:32,0:32:96.30:0,96,1394	0/0:23,0:23:69.23:0,69,1033	0/0:38,0:37:99:0,111,1643	0/0:24,0:24:72.23:0,72,1060	0/0:25,0:25:66.22:0,66,989	0/0:22,0:22:66.19:0,66,945	0/0:6,0:6:18.06:0,18,270
chr10	9948352	.	G	GAC	5878.34	PASS	AB=0.982;AC=25;AF=0.446;AN=56;BaseQRankSum=8.162;DP=863;FS=7.684;HRun=0;HaplotypeScore=239.2856;InbreedingCoeff=-0.8079;MQ=51.92;MQ0=19;MQRankSum=-5.430;QD=9.13;ReadPosRankSum=-0.180;VQSLOD=3.4939;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:29:99:222,0,556	0/1:10,1:11:99:111,0,190	0/0:87,0:39:74.72:0,75,941	0/0:104,0:37:60.05:0,60,699	0/1:16,0:16:99:222,0,165	0/1:26,0:26:47.59:48,0,546	0/1:36,0:36:99:261,0,625	0/1:26,12:37:99:424,0,561	0/1:33,0:32:99:318,0,590	0/1:30,0:30:99:264,0,442	0/1:15,0:15:99:198,0,141	0/1:27,0:27:99:173,0,569	0/1:36,1:37:99:357,0,735	0/1:27,0:27:99:137,0,618	0/1:31,1:30:99:239,0,650	0/1:25,2:26:99:234,0,447	0/1:18,0:18:99:185,0,288	0/1:20,0:20:99:159,0,317	0/1:16,0:15:99:124,0,224	0/1:22,0:22:99:293,0,306	0/1:25,0:23:99:194,0,135	0/1:40,0:40:99:489,0,822	0/1:28,0:28:99:362,0,495	0/1:31,0:31:99:135,0,597	0/1:22,0:22:99:550,0,156	0/1:29,0:29:99:139,0,674	0/0:28,0:28:15.88:0,16,436	0/1:8,0:8:39.82:40,0,153
chr10	9948362	.	AAGAG	A	6666.70	PASS	AB=0.733;AC=18;AF=0.321;AN=56;BaseQRankSum=4.700;DP=844;FS=11.410;HRun=0;HaplotypeScore=268.5697;InbreedingCoeff=-0.1522;MQ=53.79;MQ0=19;MQRankSum=-9.029;QD=17.54;ReadPosRankSum=1.407;VQSLOD=2.9973;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:45.10:0,45,946	1/1:6,4:10:12.44:236,12,0	0/0:83,0:35:56.76:0,57,1213	0/0:124,0:48:41.75:0,42,1181	0/0:15,0:15:30.09:0,30,623	0/1:15,8:23:97.13:302,0,97	0/1:21,13:34:40.55:485,0,41	0/0:35,0:34:96.24:0,96,1910	0/1:13,15:27:59.92:650,0,60	0/1:16,12:28:99:673,0,259	1/1:6,12:18:30.08:463,30,0	0/1:15,10:25:94.47:434,0,94	0/1:19,14:33:99:574,0,164	0/1:17,8:25:44.43:331,0,44	0/1:20,10:28:99:409,0,127	0/1:12,13:24:46.42:551,0,46	0/1:12,6:18:23.92:397,0,24	0/1:14,6:20:99:373,0,142	0/0:16,0:15:33.09:0,33,691	0/0:20,0:20:45.15:0,45,986	0/0:23,0:21:45.14:0,45,994	0/0:41,0:41:90.26:0,90,1768	0/0:26,0:26:48.16:0,48,1073	0/0:27,0:27:48.13:0,48,961	0/0:21,0:21:57.18:0,57,1344	0/1:17,9:26:99:462,0,373	0/1:27,2:29:99:150,0,236	0/1:4,4:8:99:175,0,126
chr10	9948366	.	G	GAGAGAGAGACACAGAGAGGA	48188.13	PASS	AB=1.000;AC=42;AF=0.750;AN=56;BaseQRankSum=-5.727;DP=834;FS=9.842;HRun=0;HaplotypeScore=398.5181;InbreedingCoeff=0.0423;MQ=54.51;MQ0=19;MQRankSum=-11.241;QD=77.22;ReadPosRankSum=5.176;VQSLOD=3.3600;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:28:99:843,0,467	1/1:9,2:11:24.08:1422,24,0	0/0:87,0:39:63.80:0,64,1508	0/0:122,0:44:43.25:0,43,1419	0/1:16,0:16:99:323,0,293	1/1:21,1:23:60.20:3055,60,0	1/1:32,0:32:69.12:3062,69,0	0/1:37,0:36:99:1505,0,559	1/1:27,1:27:75.24:2724,75,0	1/1:26,1:28:9.47:3553,9,0	1/1:17,0:18:36.12:923,36,0	1/1:19,2:21:54.18:2253,54,0	1/1:31,1:33:78.27:4063,78,0	1/1:23,3:26:72.20:3900,72,0	1/1:26,3:27:69.19:3453,69,0	1/1:22,3:24:63.17:2644,63,0	1/1:12,4:17:42.14:2077,42,0	1/1:18,2:20:48.13:2052,48,0	0/1:16,0:15:99:446,0,236	0/1:21,0:21:99:851,0,363	0/1:22,0:20:71.88:72,0,611	0/1:39,0:39:99:1811,0,607	0/1:22,0:22:99:484,0,483	0/1:26,0:26:99:869,0,505	0/1:21,0:21:99:222,0,459	1/1:19,3:22:60.21:3329,60,0	1/1:16,15:31:30.10:1189,30,0	1/1:11,0:11:30.08:1066,30,0
chr10	9948373	.	AAG	A	776.53	PASS	AB=0.915;AC=15;AF=0.268;AN=56;BaseQRankSum=6.288;DP=686;FS=5.352;HRun=0;HaplotypeScore=253.4997;InbreedingCoeff=-0.3788;MQ=60.31;MQ0=15;MQRankSum=-3.211;QD=2.40;ReadPosRankSum=1.453;VQSLOD=1.4971;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:18,3:20:50.41:50,0,759	0/0:8,0:8:13.16:0,13,221	0/0:75,0:38:77.85:0,78,1465	0/0:116,0:44:69.23:0,69,1269	0/1:11,3:14:33.50:33,0,539	0/1:18,0:18:21.21:21,0,355	0/1:22,0:23:16.86:17,0,315	0/1:34,0:33:70.38:70,0,1386	0/1:22,1:22:58.26:58,0,458	0/0:18,0:18:41.78:0,42,456	0/0:16,0:16:44.91:0,45,471	0/0:15,0:15:44.96:0,45,470	0/1:20,1:21:20.92:21,0,453	0/1:16,2:18:74.73:75,0,345	0/1:21,2:21:40.70:41,0,409	0/1:21,0:21:7.44:7,0,467	0/0:14,0:14:41.96:0,42,398	0/1:17,0:17:12.23:12,0,397	0/0:13,1:13:0.66:0,1,654	0/1:14,4:18:98.53:99,0,746	0/0:22,1:21:9.88:0,10,889	0/1:23,10:33:99:318,0,1123	0/1:17,2:19:24.24:24,0,923	0/1:15,5:20:83.05:83,0,625	0/0:18,2:20:15.97:0,16,1041	0/0:13,0:13:38.89:0,39,342	0/0:23,0:23:29.79:0,30,349	0/0:7,0:7:21.02:0,21,247
chr10	9948377	.	A	ACAC	731.79	PASS	AB=0.897;AC=13;AF=0.232;AN=56;BaseQRankSum=8.557;DP=681;FS=9.098;HRun=0;HaplotypeScore=263.1284;InbreedingCoeff=-0.2875;MQ=59.54;MQ0=14;MQRankSum=-3.906;QD=2.72;ReadPosRankSum=1.512;VQSLOD=0.9126;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:16,2:18:40.22:40,0,783	0/0:8,0:8:4.15:0,4,348	0/0:68,0:34:42.82:0,43,1252	0/0:106,1:44:57.22:0,57,1299	0/1:13,3:16:39.85:40,0,538	0/0:17,0:17:9.72:0,10,616	0/1:22,0:23:5.35:5,0,720	0/0:30,0:29:75.25:0,75,1367	0/1:22,1:22:19.87:20,0,958	0/0:19,0:19:45.94:0,46,966	0/0:17,0:17:48.11:0,48,825	0/0:17,0:17:48.16:0,48,833	0/1:20,1:21:2.30:2,0,961	0/1:17,2:19:99:104,0,621	0/0:20,1:20:22.59:0,23,806	0/0:23,0:23:21.61:0,22,928	0/0:15,0:15:42.14:0,42,720	0/1:18,0:18:42.35:42,0,662	0/1:12,1:13:17.46:17,0,632	0/1:14,4:18:99:145,0,728	0/1:25,1:24:2.58:3,0,1007	0/1:22,10:32:99:340,0,1080	0/1:19,2:21:25.49:25,0,885	0/1:15,5:20:92.67:93,0,612	0/0:18,2:20:11.58:0,12,960	0/0:15,0:15:41.30:0,41,705	0/0:24,0:24:15.36:0,15,484	0/0:7,0:7:21.07:0,21,390
chr10	9948443	.	TA	T	16327.43	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=9.464;DP=709;FS=3.397;HRun=1;HaplotypeScore=113.5245;InbreedingCoeff=0.9983;MQ=69.60;MQ0=9;MQRankSum=0.332;QD=36.20;ReadPosRankSum=8.059;VQSLOD=3.8791;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,25:29:78.19:1064,78,0	1/1:0,10:10:30.10:419,30,0	0/0:58,0:32:68.62:0,69,878	0/0:71,2:38:67.37:0,67,727	0/0:12,0:12:36.11:0,36,552	1/1:0,19:19:57.07:735,57,0	1/1:1,22:23:34.37:692,34,0	0/0:38,0:38:99:0,114,1737	1/1:3,22:24:66.17:888,66,0	1/1:0,20:20:57.19:796,57,0	1/1:2,17:19:45.15:624,45,0	1/1:0,21:21:60.20:827,60,0	1/1:2,21:23:63.14:854,63,0	1/1:1,29:30:81.27:1118,81,0	1/1:1,23:24:65.81:879,66,0	1/1:0,28:27:78.26:1080,78,0	1/1:2,24:26:65.32:915,65,0	1/1:4,31:35:96.93:1290,97,0	0/0:11,0:11:33.10:0,33,483	0/0:17,0:17:48.12:0,48,719	0/0:42,0:42:99:0,101,1587	1/1:1,22:23:45.12:629,45,0	1/1:1,17:18:42.03:587,42,0	1/1:5,23:27:66.22:904,66,0	0/0:6,0:6:18.06:0,18,288	1/1:0,19:19:57.19:796,57,0	1/1:1,21:22:66.19:900,66,0	1/1:2,7:9:27:329,27,0
chr10	9948502	.	TGAG	T	1746.08	PASS	AB=0.933;AC=10;AF=0.185;AN=54;BaseQRankSum=5.267;DP=644;FS=0.581;HRun=0;HaplotypeScore=124.6264;InbreedingCoeff=0.7183;MQ=69.73;MQ0=12;MQRankSum=1.196;QD=15.73;ReadPosRankSum=2.737;VQSLOD=3.6192;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:15,14:29:42.10:572,42,0	0/0:4,0:4:12.04:0,12,242	0/0:63,0:29:18.03:0,18,345	0/0:80,0:43:26.43:0,26,460	./.	0/0:23,0:23:54.18:0,54,1054	0/1:18,1:19:15.45:15,0,457	0/0:37,0:36:45.63:0,46,906	0/0:18,0:18:27.09:0,27,504	0/0:19,0:19:36.11:0,36,684	0/0:14,0:14:15.04:0,15,266	0/0:20,0:20:39.09:0,39,710	0/0:18,0:18:33.11:0,33,638	0/0:25,0:25:45.14:0,45,871	0/0:15,0:15:26.94:0,27,478	0/0:19,0:18:27.09:0,27,544	0/0:33,0:33:78.27:0,78,1546	0/0:23,0:23:33.09:0,33,613	0/1:10,1:11:24.49:24,0,284	0/0:14,0:14:27.09:0,27,532	0/0:48,0:48:99:0,105,2085	1/1:4,7:11:15.05:206,15,0	1/1:5,7:12:18.06:255,18,0	1/1:11,18:29:60.20:838,60,0	0/0:3,0:3:6.01:0,6,64	0/0:20,0:20:42.14:0,42,832	0/0:19,0:19:42.14:0,42,847	0/0:8,0:8:21.07:0,21,424
chr10	9949464	.	GCACA	G	4208.15	PASS	AB=0.714;AC=31;AF=0.596;AN=52;BaseQRankSum=1.039;DP=485;FS=12.697;HRun=0;HaplotypeScore=90.7952;InbreedingCoeff=0.7305;MQ=57.59;MQ0=12;MQRankSum=0.529;QD=15.41;ReadPosRankSum=1.405;VQSLOD=1.9692;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:24:15.02:0,15,183	1/1:4,3:8:3:28,3,0	./.	./.	1/1:5,7:12:9.03:141,9,0	1/1:10,3:18:17.26:196,17,0	1/1:20,5:26:18.06:274,18,0	0/0:21,0:20:9.03:0,9,139	1/1:10,4:16:21.05:292,21,0	1/1:16,1:19:21.02:238,21,0	1/1:6,3:11:9.03:141,9,0	1/1:8,8:18:30.09:444,30,0	1/1:6,6:12:21.06:311,21,0	1/1:8,5:13:18.06:281,18,0	1/1:19,7:26:21.07:330,21,0	1/1:8,9:19:36.11:527,36,0	1/1:16,5:20:27.08:390,27,0	0/1:12,6:20:13.73:352,0,14	0/0:13,0:12:12.04:0,12,270	0/0:20,0:21:23.82:0,24,450	0/0:34,0:33:33.10:0,33,624	0/0:16,0:17:2.94:0,3,18	0/0:9,0:6:3.01:0,3,41	0/0:32,0:31:30.08:0,30,391	1/1:12,1:13:2.88:47,3,0	0/0:10,0:10:3.22:0,3,13	1/1:12,4:17:14.17:215,14,0	0/0:7,0:9:6.38:0,6,26
chr10	9949547	.	TAA	T	4241.69	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-6.106;DP=577;FS=0.000;HRun=14;HaplotypeScore=98.3188;InbreedingCoeff=0.9726;MQ=77.06;MQ0=0;MQRankSum=0.710;QD=15.48;ReadPosRankSum=5.720;VQSLOD=4.0002;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:25:41.88:0,42,210	1/1:2,6:9:17.74:151,18,0	0/0:25,0:21:22.45:0,22,221	0/0:16,0:15:17.77:0,18,186	0/0:24,0:29:56.70:0,57,438	0/0:6,0:23:37.94:0,38,163	0/0:6,1:17:4.76:0,5,148	0/0:21,0:24:41:0,41,418	0/0:9,0:14:25.48:0,25,192	1/1:9,16:27:35.60:421,36,0	1/1:9,9:20:28.15:228,28,0	1/1:9,16:26:22.21:355,22,0	1/1:8,18:26:45.16:462,45,0	1/1:4,17:22:50.77:455,51,0	1/1:7,15:23:45.15:398,45,0	1/1:5,15:20:45.01:416,45,0	1/1:9,12:22:23.71:264,24,0	1/1:8,14:22:13.05:282,13,0	0/0:14,0:14:35.97:0,36,358	0/0:15,0:17:38.03:0,38,398	0/0:12,0:15:19.03:0,19,226	0/0:12,0:17:23.39:0,23,214	0/0:1,0:14:29.82:0,30,103	0/0:5,0:27:26.77:0,27,181	0/0:8,0:23:35.78:0,36,305	1/1:9,13:22:29.78:277,30,0	1/1:4,14:19:21.36:224,21,0	1/1:1,13:16:29.59:309,30,0
chr10	9953192	.	C	CCA	34154.16	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-7.557;DP=788;FS=10.255;HRun=0;HaplotypeScore=115.0464;InbreedingCoeff=0.9950;MQ=89.97;MQ0=2;MQRankSum=-8.906;QD=51.91;ReadPosRankSum=6.673;VQSLOD=4.8527;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,46:49:99:2499,123,0	1/1:0,5:5:15.05:304,15,0	0/0:29,0:28:81.25:0,81,1198	0/0:45,0:44:99:0,123,1814	0/0:30,0:30:84.27:0,84,1343	1/1:3,18:21:45.92:1023,46,0	1/1:0,40:40:99:2194,108,0	1/1:1,23:27:81.23:1534,81,0	1/1:2,27:31:78.27:1560,78,0	1/1:1,27:30:90.27:1713,90,0	1/1:0,21:23:63.13:1176,63,0	1/1:3,26:29:64.51:1422,65,0	1/1:0,33:34:90.27:1827,90,0	1/1:1,26:27:78.27:1556,78,0	1/1:1,19:20:54.19:1097,54,0	1/1:1,23:25:66.23:1341,66,0	1/1:2,30:32:78.27:1584,78,0	1/1:2,24:27:39.48:1022,39,0	1/1:0,21:21:63.22:1268,63,0	1/1:2,27:29:81.23:1573,81,0	1/1:0,31:32:69.24:1402,69,0	1/1:0,23:26:72.16:1377,72,0	1/1:1,25:27:62.96:1279,63,0	1/1:1,30:31:84.29:1707,84,0	0/0:26,0:26:78.26:0,78,1250	1/1:1,33:37:99:1995,105,0	1/1:0,24:24:60.21:1213,60,0	1/1:0,8:9:24.08:487,24,0
chr10	9957052	.	C	CCACA	22275.31	PASS	AB=1.000;AC=46;AF=0.821;AN=56;BaseQRankSum=14.182;DP=851;FS=0.734;HRun=0;HaplotypeScore=255.0245;InbreedingCoeff=0.7268;MQ=73.04;MQ0=4;MQRankSum=-13.284;QD=30.47;ReadPosRankSum=7.916;VQSLOD=4.2926;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,35:42:80.66:1931,81,0	1/1:14,0:14:10.08:307,10,0	0/0:29,0:28:78.27:0,78,1618	0/0:34,0:34:87.11:0,87,1621	0/0:25,0:25:75.20:0,75,1443	1/1:30,0:30:50.20:796,50,0	1/1:29,0:29:36.12:548,36,0	1/1:0,29:37:99:2310,111,0	1/1:38,0:38:90.22:1074,90,0	0/1:33,0:33:24.35:793,0,24	1/1:16,0:16:15.11:384,15,0	1/1:34,0:34:66.23:974,66,0	1/1:35,0:35:58.13:827,58,0	1/1:39,0:39:99:1190,99,0	1/1:41,0:42:90.21:1008,90,0	1/1:31,0:31:69.17:788,69,0	1/1:33,0:33:46.16:719,46,0	1/1:24,0:24:40.17:615,40,0	1/1:10,9:26:77.65:1409,78,0	1/1:0,18:22:33.11:843,33,0	1/1:3,27:41:32.75:738,33,0	1/1:2,33:41:75.20:1902,75,0	1/1:0,15:16:24.08:596,24,0	1/1:1,26:36:29.95:697,30,0	0/0:32,0:32:96.23:0,96,1873	0/1:34,0:34:15.71:899,0,16	1/1:26,0:26:72.20:864,72,0	1/1:7,0:7:6.01:63,6,0
chr10	9957053	.	G	GACAC	37501.76	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=10.172;DP=891;FS=1.696;HRun=0;HaplotypeScore=215.8557;InbreedingCoeff=0.9703;MQ=72.75;MQ0=4;MQRankSum=-13.540;QD=48.70;ReadPosRankSum=5.638;VQSLOD=5.4978;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:41,0:42:80.72:1899,81,0	1/1:1,12:14:27.09:705,27,0	0/0:29,0:28:81.23:0,81,1469	0/0:36,0:36:83.27:0,83,1494	0/0:25,0:25:75.22:0,75,1387	1/1:2,28:32:72.25:1886,72,0	1/1:1,32:37:39.13:1012,39,0	1/1:32,0:32:96.29:2121,96,0	1/1:1,39:40:90.31:2322,90,0	1/1:2,32:39:96.19:2098,96,0	1/1:5,14:21:33.11:851,33,0	1/1:2,32:35:84.29:2197,84,0	1/1:3,31:35:72.21:1862,72,0	1/1:1,40:41:99:2572,99,0	1/1:4,40:47:90.31:2331,90,0	1/1:2,31:35:69.24:1807,69,0	1/1:3,32:37:66.23:1670,66,0	1/1:0,24:25:57.14:1433,57,0	1/1:29,0:27:80.92:1474,81,0	1/1:22,0:21:33.11:851,33,0	1/1:38,0:37:38.77:890,39,0	1/1:44,0:42:78.25:1903,78,0	1/1:17,0:17:24.08:579,24,0	1/1:33,0:33:29.95:696,30,0	0/0:31,0:31:90.26:0,90,1640	1/1:2,36:41:99:2314,105,0	1/1:1,26:27:72.25:1873,72,0	1/1:0,7:7:6.02:157,6,0
chr10	9959119	.	ACTCTCT	A	692.68	PASS	AB=0.981;AC=14;AF=0.467;AN=30;BaseQRankSum=0.069;DP=440;FS=4.607;HRun=0;HaplotypeScore=86.4455;InbreedingCoeff=0.4149;MQ=33.00;MQ0=120;MQRankSum=0.849;QD=5.37;ReadPosRankSum=1.399;VQSLOD=1.4936;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:19:1.57:2,0,15	./.	./.	./.	./.	./.	./.	./.	./.	1/1:7,7:13:15.05:292,15,0	1/1:8,8:16:2.96:19,3,0	0/0:20,0:11:0.24:0,0,73	0/1:16,0:9:0:0,0,0	0/0:13,0:9:2.90:0,3,16	./.	0/0:17,0:15:0:0,0,0	0/0:6,0:13:3:0,3,25	1/1:7,0:7:0.89:2,1,0	0/0:14,0:11:11.93:0,12,222	./.	./.	0/0:21,0:17:0.67:0,1,1	1/1:18,0:16:0.89:2,1,0	0/0:16,0:15:2.72:0,3,63	./.	1/1:9,7:12:21.07:377,21,0	1/1:6,0:10:5.70:100,6,0	./.
chr10	9959163	.	T	TCA	557.82	PASS	AB=0.954;AC=14;AF=0.259;AN=54;BaseQRankSum=0.567;DP=479;FS=14.296;HRun=0;HaplotypeScore=98.4580;InbreedingCoeff=0.3704;MQ=37.79;MQ0=48;MQRankSum=0.997;QD=2.66;ReadPosRankSum=-0.288;VQSLOD=0.9973;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:43,0:35:13.74:82,14,0	0/0:7,0:5:2.94:0,3,18	0/0:7,0:3:9.01:0,9,83	0/0:6,0:2:6:0,6,54	./.	0/0:17,0:15:8.94:0,9,68	0/0:18,0:16:29.72:0,30,213	0/0:16,0:12:27.76:0,28,179	0/0:13,0:12:11.93:0,12,90	0/0:21,0:17:37.49:0,37,185	0/0:15,0:13:4.78:0,5,24	0/1:21,0:17:24.04:129,0,24	1/1:16,0:12:6.09:98,6,0	1/1:15,0:13:11.94:90,12,0	0/0:22,0:20:8.91:0,9,63	0/0:18,0:17:26.59:0,27,174	0/0:23,0:21:6.64:0,7,133	0/0:16,0:14:29.64:0,30,205	0/0:11,0:11:27.33:0,27,183	0/1:10,0:7:0:0,0,0	0/0:12,0:11:18.35:0,18,136	0/1:24,0:23:11.84:111,0,12	1/1:25,0:24:22.63:139,23,0	0/1:18,11:26:23.59:35,0,24	0/0:14,0:13:14.72:0,15,92	0/0:17,0:13:21.27:0,21,131	0/1:20,0:19:26.59:27,0,129	0/1:7,0:6:7.56:8,0,50
chr10	9959165	.	TCACA	T	784.02	PASS	AB=1.000;AC=8;AF=0.148;AN=54;BaseQRankSum=-2.735;DP=493;FS=0.000;HRun=0;HaplotypeScore=106.0005;InbreedingCoeff=0.6124;MQ=38.02;MQ0=47;MQRankSum=0.046;QD=11.53;ReadPosRankSum=-0.985;VQSLOD=2.6510;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:36:21.07:0,21,269	0/0:7,0:5:3.01:0,3,38	0/0:7,0:3:9.03:0,9,165	0/0:7,0:3:9.03:0,9,148	./.	0/0:17,0:15:9.03:0,9,136	0/0:18,0:16:0.43:0,0,337	1/1:9,7:12:21.07:312,21,0	0/0:13,0:12:12.04:0,12,178	0/0:22,0:18:39.02:0,39,537	0/1:15,0:13:5.20:5,0,44	0/0:22,0:19:34.43:0,34,542	0/0:18,0:14:21.04:0,21,275	0/0:17,0:15:12.04:0,12,183	0/0:23,0:21:18.06:0,18,262	0/0:21,0:20:30.10:0,30,433	0/0:23,0:21:30.09:0,30,408	0/0:16,0:14:31.91:0,32,431	0/1:12,0:11:3.46:207,0,3	0/0:3,7:7:0.46:0,0,1	1/1:12,0:11:15.94:218,16,0	0/0:25,0:24:26.75:0,27,389	0/0:24,0:23:23.61:0,24,308	0/0:29,0:26:11.80:0,12,176	1/1:13,0:12:15.05:184,15,0	0/0:18,0:14:20.67:0,21,240	0/0:21,0:20:35.40:0,35,483	0/0:7,0:6:18.06:0,18,233
chr10	9959690	.	TA	T	8281.46	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-0.012;DP=497;FS=5.806;HRun=10;HaplotypeScore=60.2958;InbreedingCoeff=0.9717;MQ=84.18;MQ0=3;MQRankSum=-3.713;QD=20.35;ReadPosRankSum=4.417;VQSLOD=5.7121;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,32:35:86.98:755,87,0	1/1:1,7:8:19.75:180,20,0	0/0:26,2:24:47.19:0,47,458	0/0:27,0:21:39.50:0,40,380	0/0:20,1:21:31.09:0,31,564	1/1:5,20:25:53.98:469,54,0	1/1:2,14:16:38.99:338,39,0	1/1:7,9:16:26.37:233,26,0	1/1:1,14:16:44.03:371,44,0	1/1:5,16:21:25.65:391,26,0	1/1:1,22:23:56.95:494,57,0	1/1:2,16:18:44.98:389,45,0	1/1:1,17:18:47.99:417,48,0	1/1:1,10:11:26.99:234,27,0	1/1:3,9:13:28.82:240,29,0	1/1:0,9:9:24:208,24,0	1/1:1,23:24:62.98:547,63,0	1/1:1,14:14:29.99:261,30,0	1/1:1,11:12:29.93:250,30,0	1/1:5,9:14:35.96:305,36,0	1/1:2,11:13:23.99:208,24,0	1/1:0,12:12:29.99:260,30,0	1/1:1,14:15:29.92:260,30,0	1/1:2,22:24:59.98:520,60,0	0/0:12,1:13:13.15:0,13,365	1/1:4,20:24:59.98:521,60,0	1/1:2,16:18:41.99:365,42,0	1/1:5,2:7:8.74:64,9,0
chr10	9964538	.	T	TA	16031.12	PASS	AB=0.581;AC=47;AF=0.839;AN=56;BaseQRankSum=-11.006;DP=660;FS=0.961;HRun=8;HaplotypeScore=58.7373;InbreedingCoeff=0.8698;MQ=82.73;MQ0=0;MQRankSum=-3.822;QD=27.69;ReadPosRankSum=2.353;VQSLOD=5.4991;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,31:35:87.26:1004,87,0	1/1:0,13:13:39.03:432,39,0	0/0:21,0:21:39.68:0,40,394	0/0:15,0:15:32.94:0,33,287	0/0:26,0:26:72.02:0,72,653	1/1:5,22:27:67.44:765,67,0	1/1:3,13:17:38.93:418,39,0	1/1:6,23:29:70.44:788,70,0	1/1:0,24:24:69.21:796,69,0	1/1:8,20:28:59.59:679,60,0	1/1:5,18:23:52.66:577,53,0	1/1:3,10:13:30.09:344,30,0	1/1:2,15:17:45.13:519,45,0	1/1:2,19:21:51.08:569,51,0	1/1:6,31:37:87.26:1004,87,0	1/1:2,32:34:77.86:1055,78,0	0/1:5,13:18:15.81:342,0,16	1/1:3,12:15:36.11:415,36,0	1/1:6,17:24:33.35:570,33,0	1/1:4,31:35:87.26:1004,87,0	1/1:5,11:16:30.09:346,30,0	1/1:1,24:25:69.21:796,69,0	1/1:4,30:35:62.62:956,63,0	1/1:1,24:25:63.19:727,63,0	0/0:19,0:19:54.03:0,54,494	1/1:7,22:29:66.18:752,66,0	1/1:4,26:30:78.22:892,78,0	1/1:0,9:9:24.07:277,24,0
chr10	9965157	.	T	TG	24701.34	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-10.290;DP=703;FS=4.529;HRun=2;HaplotypeScore=64.9993;InbreedingCoeff=0.9996;MQ=98.70;MQ0=0;MQRankSum=-13.406;QD=39.15;ReadPosRankSum=6.411;VQSLOD=4.8291;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:0,48:48:99:2073,144,0	1/1:0,10:10:30.10:432,30,0	0/0:39,0:39:99:0,111,1318	0/0:33,0:33:90.28:0,90,1106	1/1:1,13:14:36.12:511,36,0	1/1:0,16:16:42.14:605,42,0	1/1:1,23:24:63.21:908,63,0	1/1:4,28:32:81.27:1165,81,0	1/1:0,26:26:72.24:1037,72,0	1/1:2,27:29:81.25:1133,81,0	1/1:0,14:14:42.14:605,42,0	1/1:3,17:20:45.15:648,45,0	1/1:0,24:24:57.06:821,57,0	1/1:1,35:36:96.32:1381,96,0	1/1:0,28:28:75.21:1057,75,0	1/1:2,27:29:72.24:1037,72,0	1/1:0,28:28:84.28:1210,84,0	1/1:0,18:18:54.18:777,54,0	1/1:2,23:24:72.24:1034,72,0	1/1:0,19:19:57.19:820,57,0	1/1:1,39:40:99:1426,99,0	1/1:1,20:21:57.19:821,57,0	1/1:3,15:18:45.15:642,45,0	1/1:2,32:34:96.32:1382,96,0	1/1:0,20:20:60.20:864,60,0	1/1:2,21:23:63.20:889,63,0	1/1:1,18:19:54.18:777,54,0	1/1:0,16:16:45.15:648,45,0
chr10	9965294	.	TACAC	T	880.71	PASS	AB=0.981;AC=31;AF=0.775;AN=40;BaseQRankSum=1.490;DP=563;FS=7.260;HRun=0;HaplotypeScore=96.4603;InbreedingCoeff=0.3184;MQ=72.86;MQ0=17;MQRankSum=-0.875;QD=2.65;ReadPosRankSum=1.749;VQSLOD=0.9413;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	1/1:5,1:7:6.01:73,6,0	./.	./.	0/0:19,0:22:9.24:0,9,130	./.	1/1:30,0:29:3:28,3,0	./.	1/1:21,0:22:6.01:56,6,0	1/1:18,2:18:4.48:50,4,0	./.	0/1:15,0:15:1.14:1,0,9	1/1:20,3:24:9.02:119,9,0	./.	1/1:14,2:16:9.03:127,9,0	1/1:17,2:20:11.93:135,12,0	1/1:28,1:29:7.63:116,8,0	0/1:16,0:16:3.45:64,0,3	1/1:19,0:17:6.01:58,6,0	1/1:17,0:21:6.22:41,6,0	1/1:23,0:23:0.47:1,0,0	1/1:12,0:14:0.93:1,1,0	./.	1/1:27,0:27:6:66,6,0	0/0:16,0:17:3.01:0,3,41	0/0:16,0:15:3:0,3,25	0/1:17,0:17:6.94:20,0,7	1/1:7,0:6:3.01:43,3,0
chr10	9968523	.	TAC	T	4525.98	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=4.880;DP=527;FS=2.907;HRun=0;HaplotypeScore=103.6663;InbreedingCoeff=0.7933;MQ=70.40;MQ0=5;MQRankSum=0.808;QD=11.66;ReadPosRankSum=2.539;VQSLOD=4.2639;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:31,2:33:31.98:473,32,0	1/1:2,9:13:17.78:156,18,0	0/0:25,0:20:9.01:0,9,101	0/0:21,0:14:17.41:0,17,147	1/1:6,13:19:11.52:113,12,0	1/1:20,1:21:42.17:440,42,0	1/1:4,13:18:3:33,3,0	0/0:24,0:24:42.14:0,42,633	1/1:6,10:17:5.85:49,6,0	1/1:11,11:21:12.35:288,12,0	1/1:12,3:15:3.37:17,3,0	1/1:8,2:10:12.03:136,12,0	1/1:6,13:18:9.02:96,9,0	1/1:8,11:19:9.03:101,9,0	1/1:4,15:19:11.87:120,12,0	1/1:10,4:14:33.07:379,33,0	1/1:20,2:22:32.91:372,33,0	1/1:4,12:15:18.05:211,18,0	0/0:8,0:8:14.94:0,15,145	0/0:22,0:22:24.24:0,24,445	0/0:39,0:37:19.68:0,20,563	1/1:3,16:19:3.40:32,3,0	1/1:18,4:22:27.08:314,27,0	1/1:16,3:19:27.06:296,27,0	1/1:7,5:12:6.02:71,6,0	1/1:7,14:20:36.58:418,37,0	1/1:15,0:15:29.68:307,30,0	1/1:3,0:3:9.03:106,9,0
chr10	9968543	.	CACAT	C	4464.22	PASS	AB=1.000;AC=45;AF=0.804;AN=56;BaseQRankSum=6.160;DP=593;FS=15.417;HRun=0;HaplotypeScore=134.3521;InbreedingCoeff=0.0237;MQ=55.53;MQ0=6;MQRankSum=2.841;QD=7.63;ReadPosRankSum=0.764;VQSLOD=3.2075;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:39,0:39:17.32:326,17,0	1/1:14,0:14:23.90:257,24,0	0/0:8,0:4:2.99:0,3,23	0/1:13,0:6:2.07:19,0,2	0/1:20,0:20:49.29:49,0,74	1/1:22,0:22:47.39:275,47,0	1/1:21,0:21:17.77:130,18,0	0/1:26,0:26:3.37:3,0,349	1/1:22,0:23:9.41:140,9,0	0/1:17,0:16:40.21:125,0,40	1/1:4,14:18:5.47:48,5,0	1/1:19,0:19:8.70:75,9,0	1/1:25,0:24:27.62:212,28,0	1/1:17,0:17:14.10:141,14,0	1/1:24,0:24:22.40:253,22,0	1/1:25,0:25:38.89:283,39,0	1/1:29,0:29:24.70:203,25,0	1/1:19,0:17:20.24:289,20,0	0/1:13,0:13:72.45:72,0,86	0/1:24,0:24:52.09:52,0,222	0/1:53,0:51:14.83:15,0,244	0/1:23,0:23:9.93:65,0,10	1/1:24,0:24:28.48:234,28,0	1/1:20,0:20:37.50:345,37,0	0/1:10,0:10:4.96:5,0,81	1/1:24,0:22:39.72:423,40,0	1/1:18,0:18:47.98:327,48,0	1/1:5,0:5:14:100,14,0
chr10	9968547	.	TAC	T	3092.52	PASS	AB=0.880;AC=46;AF=0.885;AN=52;BaseQRankSum=1.604;DP=593;FS=4.804;HRun=0;HaplotypeScore=124.1212;InbreedingCoeff=-0.0786;MQ=54.97;MQ0=7;MQRankSum=0.374;QD=5.40;ReadPosRankSum=2.578;VQSLOD=2.8721;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:34,5:38:11.50:239,0,11	1/1:11,3:15:25.53:202,26,0	./.	./.	0/1:26,0:26:6.50:7,0,200	1/1:20,0:21:4.98:18,5,0	1/1:20,0:21:10.58:44,11,0	1/1:21,7:28:16.19:132,16,0	1/1:20,0:22:11.21:45,11,0	0/1:14,1:14:23.82:46,0,24	1/1:15,1:18:2.99:30,3,0	0/1:9,10:19:5.56:6,0,28	1/1:20,4:23:29.05:281,29,0	1/1:15,2:17:12.03:127,12,0	1/1:22,2:24:22.35:213,22,0	1/1:14,12:26:1.52:64,2,0	1/1:18,10:28:8.49:87,8,0	1/1:16,4:18:3.48:176,3,0	1/1:12,0:12:1.30:56,1,0	1/1:24,0:24:13.39:126,13,0	1/1:21,26:47:8.86:82,9,0	0/1:18,5:24:22.46:176,0,22	1/1:10,13:24:8.68:91,9,0	1/1:19,2:21:30.60:304,31,0	0/1:10,0:10:13.29:13,0,136	1/1:20,2:21:46.90:351,47,0	1/1:17,0:17:19.17:161,19,0	1/1:6,0:6:14.98:143,15,0
chr10	9969596	.	CA	C	18674.83	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=2.721;DP=637;FS=1.486;HRun=3;HaplotypeScore=63.3583;InbreedingCoeff=0.9954;MQ=84.92;MQ0=0;MQRankSum=-7.818;QD=33.71;ReadPosRankSum=3.312;VQSLOD=5.4579;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,41:42:99:1376,111,0	1/1:0,5:5:15.05:186,15,0	0/0:20,0:20:51.13:0,51,676	0/0:19,0:19:40.45:0,40,643	0/0:26,0:26:75.24:0,75,1064	1/1:1,25:26:72.23:892,72,0	1/1:1,27:28:75.24:930,75,0	1/1:0,30:30:90.26:1089,90,0	1/1:1,17:18:51.16:632,51,0	1/1:0,24:24:72.23:893,72,0	1/1:1,23:24:56.93:706,57,0	1/1:1,26:27:72.23:892,72,0	1/1:0,17:17:48.15:595,48,0	1/1:1,19:20:57.18:706,57,0	1/1:0,13:13:36.11:446,36,0	1/1:1,15:16:45.14:558,45,0	1/1:0,36:36:99:1264,102,0	1/1:0,19:19:54.17:669,54,0	1/1:0,25:25:75.16:866,75,0	1/1:2,15:17:39.10:483,39,0	1/1:0,41:41:99:1339,108,0	1/1:1,12:13:33.10:409,33,0	1/1:2,17:19:45.14:558,45,0	1/1:0,18:18:54.17:669,54,0	0/0:18,0:18:51.17:0,51,734	1/1:1,23:24:69.21:843,69,0	1/1:1,30:31:87.27:1078,87,0	1/1:3,18:21:48.15:595,48,0
chr10	9969876	.	TA	T	10279.99	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=6.539;DP=505;FS=19.545;HRun=8;HaplotypeScore=47.4536;InbreedingCoeff=0.9845;MQ=69.23;MQ0=0;MQRankSum=-1.031;QD=23.42;ReadPosRankSum=2.369;VQSLOD=3.3271;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,30:33:84.13:811,84,0	1/1:0,8:8:18.03:174,18,0	0/0:14,0:14:27.08:0,27,321	0/0:8,0:7:12.01:0,12,126	0/0:28,0:28:69.20:0,69,813	1/1:2,9:11:27.04:261,27,0	1/1:2,13:15:36.06:348,36,0	1/1:4,31:35:93.12:888,93,0	1/1:1,15:16:42.07:405,42,0	1/1:0,21:21:62.98:587,63,0	1/1:1,21:22:60.09:579,60,0	1/1:2,8:10:24.04:232,24,0	1/1:2,16:18:39.06:377,39,0	1/1:3,17:20:42.07:405,42,0	1/1:3,12:15:27.04:261,27,0	1/1:2,17:19:45.07:435,45,0	1/1:3,21:24:51:480,51,0	1/1:4,22:26:54.08:521,54,0	1/1:4,16:20:48.01:447,48,0	1/1:0,13:13:33.05:319,33,0	1/1:3,9:12:18.02:174,18,0	1/1:2,8:10:24.04:232,24,0	1/1:1,19:20:54.08:521,54,0	1/1:1,14:15:36.05:348,36,0	0/0:16,0:16:39.11:0,39,460	1/1:1,22:23:66.11:637,66,0	1/1:0,21:21:54.09:521,54,0	1/1:0,12:12:33.05:319,33,0
chr10	9970670	.	AAGACAGACAGAC	A	7617.76	PASS	AB=0.740;AC=37;AF=0.685;AN=54;BaseQRankSum=1.949;DP=520;FS=2.509;HRun=0;HaplotypeScore=218.2167;InbreedingCoeff=0.4383;MQ=57.81;MQ0=4;MQRankSum=-5.141;QD=19.94;ReadPosRankSum=-0.744;VQSLOD=3.8511;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:12,18:30:18.06:591,18,0	1/1:4,4:8:9.03:299,9,0	0/0:15,0:9:3.01:0,3,41	0/0:14,0:9:3.01:0,3,47	0/0:15,0:22:24.08:0,24,559	1/1:10,0:19:1.55:4,2,0	0/1:9,0:17:2.64:3,0,86	1/1:26,0:26:18.06:356,18,0	0/1:6,0:12:1.32:1,0,26	1/1:6,11:17:23.96:507,24,0	1/1:9,22:31:17.97:373,18,0	1/1:10,13:23:15.05:517,15,0	1/1:2,8:11:9.03:310,9,0	1/1:10,10:20:21.07:646,21,0	1/1:7,8:15:15.05:517,15,0	1/1:6,10:16:27.09:931,27,0	1/1:16,11:27:9.03:310,9,0	1/1:14,6:20:3.01:92,3,0	0/1:10,0:15:7.44:7,0,13	0/0:14,0:29:7.67:0,8,134	0/1:12,0:13:43.95:44,0,150	1/1:1,6:7:2.96:19,3,0	0/0:4,11:15:0:0,0,0	./.	0/0:5,0:20:42.12:0,42,1020	1/1:9,17:26:48.15:1078,48,0	0/1:10,15:25:35.78:700,0,36	1/1:0,3:3:9.03:310,9,0
chr10	9971169	.	T	TACACAC	3970.72	PASS	AB=0.660;AC=47;AF=0.904;AN=52;BaseQRankSum=-2.166;DP=530;FS=2.060;HRun=0;HaplotypeScore=142.3235;InbreedingCoeff=0.0483;MQ=58.79;MQ0=6;MQRankSum=-2.049;QD=8.78;ReadPosRankSum=-1.303;VQSLOD=2.1846;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:13,9:26:2.04:92,2,0	1/1:1,3:4:3.01:97,3,0	./.	./.	0/1:8,0:15:28.17:28,0,57	1/1:21,0:27:6.02:143,6,0	1/1:17,0:17:9.03:154,9,0	1/1:26,0:26:24.38:269,24,0	1/1:13,0:13:23.69:322,24,0	1/1:5,0:17:33.04:418,33,0	0/1:16,0:30:47.80:68,0,48	1/1:8,2:14:2.99:23,3,0	1/1:11,1:12:14.39:199,14,0	1/1:10,4:17:6.02:193,6,0	1/1:4,0:9:9.03:115,9,0	1/1:6,0:19:14.18:174,14,0	1/1:7,0:22:16.54:215,17,0	0/1:8,0:20:32.79:226,0,33	1/1:11,0:11:6.90:94,7,0	1/1:13,0:25:6.02:104,6,0	1/1:15,0:15:12.03:193,12,0	1/1:7,6:17:6.02:193,6,0	1/1:6,7:15:3.01:92,3,0	1/1:14,5:26:6.02:135,6,0	0/0:12,0:22:7.44:0,7,70	1/1:15,0:22:34.75:345,35,0	1/1:11,0:16:4.83:44,5,0	1/1:6,0:14:2.15:37,2,0
chr10	9972077	.	C	CT	156.97	PASS	AB=0.714;AC=2;AF=0.036;AN=56;BaseQRankSum=4.133;DP=782;FS=0.000;HRun=2;HaplotypeScore=185.3471;InbreedingCoeff=-0.0373;MQ=87.00;MQ0=0;MQRankSum=-3.381;QD=2.75;ReadPosRankSum=-0.286;VQSLOD=-0.4560;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:93.31:0,93,1301	0/0:11,0:11:33.11:0,33,462	0/0:25,0:24:65.97:0,66,858	0/0:32,0:32:90.15:0,90,1208	0/1:16,13:29:74.31:74,0,432	0/0:17,0:17:51.17:0,51,708	0/0:29,0:29:87.27:0,87,1196	0/0:31,0:31:87.28:0,87,1196	0/0:31,0:31:90.19:0,90,1228	0/0:27,0:27:75.23:0,75,1005	0/0:21,0:21:57.19:0,57,795	0/0:32,0:32:93.31:0,93,1300	0/0:37,0:37:99:0,108,1470	0/0:34,0:34:99:0,102,1388	0/0:39,0:39:99:0,111,1550	0/0:34,0:34:99:0,102,1390	0/0:26,0:26:78.24:0,78,1073	0/0:12,0:12:36.12:0,36,503	0/0:20,0:20:57.19:0,57,795	0/0:32,0:32:96.32:0,96,1335	0/0:58,0:58:99:0,175,2414	0/0:22,0:22:63.19:0,63,863	0/0:19,0:19:51.11:0,51,659	0/0:40,0:40:99:0,120,1660	0/1:18,10:28:99:172,0,607	0/0:31,0:31:90.29:0,90,1241	0/0:27,0:27:78.26:0,78,1091	0/0:6,0:6:18.06:0,18,252
chr10	9972167	.	CT	C	1696.57	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=10.000;DP=839;FS=3.359;HRun=3;HaplotypeScore=141.1685;InbreedingCoeff=0.9959;MQ=85.64;MQ0=0;MQRankSum=-1.713;QD=29.76;ReadPosRankSum=4.456;VQSLOD=2.6606;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,165,2233	0/0:6,0:6:18.06:0,18,258	0/0:30,0:30:90.25:0,90,1231	0/0:30,0:30:83.91:0,84,1051	1/1:2,19:21:57.18:706,57,0	0/0:18,0:18:54.17:0,54,760	0/0:34,0:34:99:0,102,1465	0/0:23,0:23:66.21:0,66,921	0/0:33,0:33:99:0,99,1370	0/0:36,0:36:99:0,105,1512	0/0:27,0:27:78.25:0,78,1118	0/0:30,0:30:87.29:0,87,1251	0/0:31,0:31:93.30:0,93,1322	0/0:39,0:39:99:0,108,1475	0/0:44,0:44:99:0,126,1796	0/0:37,0:37:99:0,111,1563	0/0:30,0:30:84.27:0,84,1187	0/0:20,0:20:60.16:0,60,837	0/0:21,0:21:60.20:0,60,860	0/0:18,0:18:54.15:0,54,740	0/0:43,0:43:99:0,129,1836	0/0:28,0:28:81.27:0,81,1165	0/0:27,0:27:78.25:0,78,1099	0/0:33,0:33:93.31:0,93,1336	1/1:2,34:36:90.28:1112,90,0	0/0:33,0:33:96.31:0,96,1349	0/0:36,0:36:99:0,108,1533	0/0:20,0:20:60.13:0,60,803
chr10	9972399	.	A	AT	1441.99	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=3.484;DP=732;FS=1.247;HRun=6;HaplotypeScore=79.6444;InbreedingCoeff=0.9997;MQ=83.56;MQ0=0;MQRankSum=-1.895;QD=27.73;ReadPosRankSum=1.677;VQSLOD=4.2751;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,126,1275	0/0:12,0:12:33.08:0,33,337	0/0:31,0:31:75.09:0,75,731	0/0:19,0:19:47.27:0,47,452	1/1:3,15:18:45.10:545,45,0	0/0:21,0:21:57.13:0,57,581	0/0:25,0:25:63.13:0,63,642	0/0:43,0:43:99:0,102,1026	0/0:34,0:34:96.21:0,96,979	0/0:32,0:32:87.19:0,87,881	0/0:16,0:16:45.10:0,45,459	0/0:21,0:21:63.12:0,63,635	0/0:30,0:30:87.18:0,87,881	0/0:26,0:26:75.17:0,75,765	0/0:35,0:35:99:0,99,1003	0/0:32,0:32:93.20:0,93,943	0/0:25,0:25:63.13:0,63,642	0/0:14,0:14:39.09:0,39,398	0/0:22,0:22:54.11:0,54,545	0/0:29,0:29:78.16:0,78,788	0/0:13,0:13:36.08:0,36,367	0/0:29,0:29:87.14:0,87,869	0/0:19,0:19:54.12:0,54,551	0/0:23,0:23:69.16:0,69,704	1/1:2,32:34:81.26:1019,81,0	0/0:34,0:34:87.18:0,87,882	0/0:36,0:35:97.46:0,97,982	0/0:13,0:13:36.08:0,36,367
chr10	9972720	.	G	GGTGTGTGT	8425.98	PASS	AB=0.849;AC=45;AF=0.865;AN=52;BaseQRankSum=-3.556;DP=507;FS=0.000;HRun=0;HaplotypeScore=135.6224;InbreedingCoeff=0.3621;MQ=48.88;MQ0=27;MQRankSum=0.944;QD=19.33;ReadPosRankSum=-0.169;VQSLOD=4.2418;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:18:14.91:250,15,0	1/1:9,0:11:12.04:315,12,0	./.	./.	0/0:11,0:11:21.07:0,21,360	0/1:12,0:17:7.81:37,0,8	0/1:22,0:21:42.10:246,0,42	1/1:17,0:14:11.21:92,11,0	1/1:7,0:13:3.01:64,3,0	0/1:20,0:24:23.26:895,0,23	1/1:10,0:11:12.04:165,12,0	1/1:17,0:18:12:310,12,0	1/1:6,6:15:3.85:22,4,0	1/1:14,0:14:7.58:123,8,0	1/1:22,0:22:18.93:392,19,0	1/1:7,5:13:9.01:246,9,0	1/1:23,0:23:27.24:678,27,0	1/1:12,6:23:14.54:344,15,0	1/1:13,0:13:12.04:302,12,0	1/1:12,0:14:24.08:626,24,0	1/1:26,0:30:21.06:512,21,0	1/1:20,0:21:32.22:900,32,0	1/1:9,0:13:11.82:266,12,0	1/1:21,9:32:15.05:394,15,0	0/0:19,0:19:9.03:0,9,139	1/1:12,0:17:24:488,24,0	1/1:10,0:13:14.23:221,14,0	1/1:12,0:12:27.07:538,27,0
chr10	9972722	.	T	TG	74.02	PASS	AB=0.750;AC=1;AF=0.018;AN=56;BaseQRankSum=0.005;DP=501;FS=3.242;HRun=2;HaplotypeScore=111.3271;InbreedingCoeff=0.3064;MQ=48.80;MQ0=26;MQRankSum=-1.914;QD=6.17;ReadPosRankSum=-3.662;VQSLOD=-0.5199;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:16:19.58:0,20,200	0/0:12,0:12:18.31:0,18,171	0/0:16,0:2:6.02:0,6,66	0/0:21,0:4:5.24:0,5,47	0/1:8,4:12:1.60:148,0,2	0/0:19,0:17:19.45:0,19,187	0/0:24,0:22:37.69:0,38,361	0/0:14,0:12:26.85:0,27,262	0/0:15,0:15:13.20:0,13,153	0/0:26,0:26:62.12:0,62,540	0/0:10,0:10:11.36:0,11,84	0/0:19,0:19:34.59:0,35,359	0/0:14,1:14:12.51:0,13,147	0/0:12,0:12:33.07:0,33,376	0/0:22,0:22:38.05:0,38,397	0/0:13,0:13:20.41:0,20,205	0/0:22,0:22:49.31:0,49,447	0/0:23,0:23:23.97:0,24,280	0/0:15,0:14:24.56:0,25,215	0/0:14,0:14:20.75:0,21,126	0/0:33,0:30:32.72:0,33,319	0/0:21,0:21:46.53:0,47,369	0/0:13,0:13:17.72:0,18,160	0/0:33,0:32:36.77:0,37,373	0/0:20,0:19:2.92:0,3,59	0/0:16,0:15:36.67:0,37,281	0/0:12,0:12:25.90:0,26,261	0/0:12,0:12:32.55:0,33,253
chr10	9972732	.	T	TGTGTGTGT	7777.75	PASS	AB=1.000;AC=45;AF=0.865;AN=52;BaseQRankSum=-4.619;DP=510;FS=2.641;HRun=0;HaplotypeScore=118.0008;InbreedingCoeff=0.3169;MQ=49.52;MQ0=25;MQRankSum=1.313;QD=17.84;ReadPosRankSum=0.072;VQSLOD=4.2255;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:20:12.51:236,13,0	1/1:9,0:9:12.04:315,12,0	./.	./.	0/0:17,0:17:21.54:0,22,361	0/1:21,0:19:7.81:37,0,8	0/1:20,0:18:44.01:283,0,44	1/1:11,0:9:10.22:57,10,0	1/1:18,0:17:3.01:64,3,0	0/1:25,0:25:32.31:680,0,32	1/1:12,0:12:12.04:165,12,0	1/1:14,6:21:12:310,12,0	1/1:14,0:13:4.32:23,4,0	1/1:12,0:12:6.02:118,6,0	1/1:22,0:22:18.05:390,18,0	1/1:14,0:14:6:147,6,0	1/1:23,0:23:35.87:688,36,0	1/1:22,0:22:2.19:203,2,0	1/1:15,0:15:8.31:169,8,0	1/1:14,0:14:24.08:594,24,0	1/1:33,0:30:21.06:512,21,0	1/1:22,0:22:32.22:900,32,0	1/1:13,0:13:11.79:266,12,0	1/1:34,0:34:15.05:394,15,0	0/0:24,0:23:9.03:0,9,139	1/1:19,0:19:21.50:468,21,0	1/1:11,0:11:14.23:221,14,0	1/1:10,0:10:27.07:538,27,0
chr10	9975733	.	T	TCCC	25583.61	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=6.138;DP=607;FS=0.450;HRun=0;HaplotypeScore=114.8106;InbreedingCoeff=0.9941;MQ=81.57;MQ0=0;MQRankSum=-8.905;QD=48.82;ReadPosRankSum=5.458;VQSLOD=6.9275;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,35:45:84.68:1834,85,0	1/1:0,6:6:18.06:377,18,0	0/0:23,0:23:69.17:0,69,1111	0/0:23,0:23:62.88:0,63,1088	0/0:23,0:23:63.22:0,63,1156	1/1:1,11:13:30.99:664,31,0	1/1:0,23:24:66.23:1433,66,0	1/1:3,22:27:54.34:1130,54,0	1/1:5,11:16:32.81:766,33,0	1/1:7,13:20:48.07:970,48,0	1/1:3,19:23:51.12:1148,51,0	1/1:2,24:27:63.22:1367,63,0	1/1:1,18:20:48.16:1050,48,0	1/1:0,21:23:54.19:1169,54,0	1/1:0,28:28:69.19:1456,69,0	1/1:2,9:13:23.17:518,23,0	1/1:0,31:33:81.71:1727,82,0	1/1:2,26:29:68.62:1504,69,0	1/1:7,9:16:27.56:605,28,0	1/1:4,18:23:63.11:1206,63,0	1/1:1,27:29:71.78:1557,72,0	1/1:1,18:21:51.09:1053,51,0	1/1:1,16:17:39:757,39,0	1/1:2,30:37:75.63:1583,76,0	0/0:14,0:14:42.14:0,42,771	1/1:1,11:13:36.09:720,36,0	1/1:1,13:14:28.75:656,29,0	1/1:1,5:6:18.02:335,18,0
chr10	9975965	.	A	ACCAT	49055.09	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-9.312;DP=722;FS=1.844;HRun=0;HaplotypeScore=102.8777;InbreedingCoeff=0.9976;MQ=83.82;MQ0=0;MQRankSum=-11.304;QD=73.11;ReadPosRankSum=7.318;VQSLOD=6.8608;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,42:44:99:3226,114,0	1/1:0,13:13:33.11:954,33,0	0/0:27,0:27:81.21:0,81,1455	0/0:24,0:24:63.17:0,63,1131	1/1:6,25:32:75.26:2161,75,0	1/1:4,22:26:75.26:2079,75,0	1/1:4,26:32:78.27:2227,78,0	1/1:7,16:28:72.22:1869,72,0	1/1:3,19:24:66.23:1899,66,0	1/1:4,21:26:78.25:2145,78,0	1/1:2,19:22:54.19:1536,54,0	1/1:1,22:24:66.23:1904,66,0	1/1:2,29:31:84.29:2428,84,0	1/1:2,19:23:57.20:1648,57,0	1/1:3,27:32:81.28:2317,81,0	1/1:3,31:37:96.33:2779,96,0	1/1:3,34:39:92.47:2673,92,0	1/1:2,17:20:48.16:1375,48,0	1/1:2,15:20:60.19:1634,60,0	1/1:2,22:26:66.23:1882,66,0	1/1:0,33:37:87.30:2476,87,0	1/1:6,15:21:54.18:1509,54,0	1/1:2,12:16:39.13:1093,39,0	1/1:1,24:26:70.12:1998,70,0	1/1:2,12:17:33.11:942,33,0	1/1:3,21:25:75.26:2112,75,0	1/1:1,19:21:57.15:1582,57,0	1/1:0,7:8:21.07:608,21,0
chr10	9976977	.	G	GGTGTGT	4535.57	PASS	AB=0.832;AC=28;AF=0.538;AN=52;BaseQRankSum=-4.212;DP=720;FS=14.772;HRun=0;HaplotypeScore=169.2357;InbreedingCoeff=0.4674;MQ=66.39;MQ0=8;MQRankSum=-3.620;QD=11.25;ReadPosRankSum=-0.301;VQSLOD=3.1402;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:38,0:41:94.06:94,0,229	1/1:6,1:9:6.02:135,6,0	./.	./.	0/1:14,0:17:45.61:120,0,46	0/0:22,0:31:16.26:0,16,177	0/1:19,0:26:29.40:29,0,58	1/1:25,0:25:3.06:8,3,0	0/0:16,0:26:16.10:0,16,152	1/1:18,6:26:34.66:689,35,0	1/1:18,2:24:5.18:121,5,0	0/0:10,0:20:7.97:0,8,35	0/0:6,0:13:2.39:0,2,5	0/0:19,0:26:11.64:0,12,139	1/1:16,6:27:24.08:650,24,0	1/1:14,6:21:14.11:359,14,0	1/1:11,7:25:2.70:323,3,0	1/1:17,6:26:15.05:360,15,0	1/1:16,0:21:0.35:16,0,0	0/0:16,0:27:16.37:0,16,163	0/0:32,0:41:22.04:0,22,224	0/0:20,0:31:6.46:0,6,24	0/0:16,0:24:13.50:0,13,210	1/1:21,0:36:22.20:313,22,0	1/1:18,1:26:11.65:303,12,0	0/1:18,0:28:18.62:648,0,19	1/1:12,4:21:12.04:368,12,0	0/0:11,0:20:0.88:0,1,2
chr10	9977433	.	A	ACC	11277.94	PASS	AB=1.000;AC=50;AF=0.893;AN=56;BaseQRankSum=-1.240;DP=627;FS=0.563;HRun=0;HaplotypeScore=108.5119;InbreedingCoeff=0.5793;MQ=63.80;MQ0=10;MQRankSum=-2.381;QD=19.61;ReadPosRankSum=0.510;VQSLOD=5.0988;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:37,0:35:85.53:637,86,0	1/1:6,0:4:8.51:61,9,0	0/0:26,0:18:47.12:0,47,492	0/0:26,0:13:18.35:0,18,249	0/1:15,0:14:6.62:115,0,7	1/1:15,3:18:33.49:444,33,0	1/1:4,33:37:20.59:464,21,0	1/1:23,0:21:57.36:483,57,0	1/1:24,5:29:41.72:678,42,0	1/1:4,17:23:31.71:597,32,0	1/1:9,1:11:21.02:249,21,0	1/1:25,0:25:68.34:466,68,0	1/1:21,0:21:43.67:358,44,0	1/1:17,0:17:39.58:243,40,0	1/1:22,2:31:71.51:769,72,0	1/1:1,1:14:16:284,16,0	1/1:25,4:33:86.28:969,86,0	1/1:13,1:14:41.93:438,42,0	1/1:20,0:20:38.32:366,38,0	1/1:11,0:11:25.78:172,26,0	1/1:38,0:37:83.85:584,84,0	1/1:20,0:20:52.89:321,53,0	1/1:13,0:13:31.21:196,31,0	1/1:33,0:33:8.25:369,8,0	0/1:24,0:24:9.30:298,0,9	1/1:22,2:24:60.85:679,61,0	1/1:23,4:28:86.84:978,87,0	1/1:0,0:5:3.01:58,3,0
chr10	9977550	.	TG	T	23347.58	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=8.616;DP=730;FS=20.947;HRun=2;HaplotypeScore=173.1299;InbreedingCoeff=0.9958;MQ=90.32;MQ0=0;MQRankSum=-11.746;QD=34.69;ReadPosRankSum=5.788;VQSLOD=2.2560;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,39:38:93.26:1187,93,0	1/1:1,15:16:42.14:545,42,0	0/0:33,0:33:87.27:0,87,1215	0/0:24,0:24:59.38:0,59,885	1/1:0,29:29:84.25:1090,84,0	1/1:0,25:25:72.23:934,72,0	1/1:0,20:20:57.19:740,57,0	1/1:2,32:34:96.25:1189,96,0	1/1:0,33:33:75.24:973,75,0	1/1:0,28:28:81.19:999,81,0	1/1:0,26:26:66.13:834,66,0	1/1:0,25:25:66.17:838,66,0	1/1:0,25:25:66.21:856,66,0	1/1:0,23:23:60.20:779,60,0	1/1:1,36:37:99:1363,105,0	1/1:0,28:28:81.26:1051,81,0	1/1:0,24:24:66.21:856,66,0	1/1:1,20:21:54.18:701,54,0	1/1:2,21:23:63.18:800,63,0	1/1:1,15:16:45.02:543,45,0	1/1:2,26:28:78.21:992,78,0	1/1:0,32:32:81.26:1051,81,0	1/1:0,17:17:45.15:584,45,0	1/1:0,30:30:78.21:993,78,0	1/1:1,20:21:54.18:701,54,0	1/1:0,36:36:99:1386,108,0	1/1:1,30:31:87.28:1129,87,0	1/1:0,6:6:18.06:234,18,0
chr10	9978289	.	TTC	T	1920.80	PASS	AB=0.975;AC=35;AF=0.625;AN=56;BaseQRankSum=-0.773;DP=529;FS=62.585;HRun=0;HaplotypeScore=111.7577;InbreedingCoeff=-0.1881;MQ=40.49;MQ0=32;MQRankSum=2.153;QD=3.93;ReadPosRankSum=6.051;VQSLOD=-0.2431;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:23,2:24:4.81:5,0,8	1/1:8,0:8:8.89:86,9,0	0/1:24,1:3:34.36:34,0,68	0/1:35,1:4:36.16:36,0,62	0/1:21,1:22:0.17:0,0,0	0/1:13,0:13:9.07:25,0,9	0/1:25,1:25:22.56:87,0,23	0/1:23,0:22:83.92:84,0,92	0/1:29,2:30:23:98,0,23	0/1:10,0:8:81.20:120,0,81	0/0:10,0:9:0.47:0,0,1	1/1:19,2:20:12.05:94,12,0	1/1:14,1:14:13.04:120,13,0	0/1:14,0:14:5.92:6,0,8	1/1:13,0:13:8.94:98,9,0	0/1:22,0:21:22.72:27,0,23	1/1:29,2:26:17.62:155,18,0	0/1:8,0:8:16.07:16,0,69	0/1:18,0:17:57.26:57,0,131	1/1:20,2:22:7.30:67,7,0	0/0:8,10:13:0.47:0,0,1	0/1:15,1:14:4.38:61,0,4	1/1:11,0:11:2.07:37,2,0	0/1:28,1:27:30.23:95,0,30	1/1:14,0:13:8.77:93,9,0	1/1:16,5:20:6.94:442,7,0	1/1:14,1:13:19.06:125,19,0	0/0:12,0:8:8.23:0,8,35
chr10	9978291	.	CCTCT	C	4515.99	PASS	AB=0.684;AC=37;AF=0.685;AN=54;BaseQRankSum=-4.039;DP=529;FS=8.017;HRun=0;HaplotypeScore=107.9103;InbreedingCoeff=0.1837;MQ=40.69;MQ0=33;MQRankSum=-0.359;QD=11.38;ReadPosRankSum=0.761;VQSLOD=3.6799;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:7,18:24:33.16:80,0,33	1/1:7,0:7:11.98:172,12,0	0/0:27,0:3:6.45:0,6,96	0/0:38,0:4:6.49:0,6,120	0/0:5,0:22:0.06:0,0,13	1/1:5,8:13:14.12:212,14,0	1/1:11,15:25:17.88:201,18,0	1/1:6,16:21:48.16:801,48,0	0/1:14,17:30:0.18:124,0,0	0/1:7,3:8:7.31:127,0,7	1/1:2,8:9:9.03:124,9,0	1/1:11,10:20:15.03:212,15,0	1/1:5,10:14:11.89:197,12,0	1/1:1,13:14:3.01:41,3,0	0/1:4,8:12:27.74:126,0,28	0/1:12,11:22:53.30:152,0,53	0/1:13,19:27:5.89:126,0,6	0/1:7,1:8:75.03:75,0,100	1/1:9,9:17:20.23:327,20,0	1/1:9,12:21:14.35:293,14,0	0/0:18,0:13:1.55:0,2,4	1/1:8,7:13:5.24:71,5,0	1/1:5,5:10:2.18:50,2,0	1/1:11,17:26:18.05:296,18,0	0/0:8,0:13:3.01:0,3,43	1/1:14,7:20:16.01:472,16,0	1/1:8,7:13:13.50:236,14,0	./.
chr10	9978295	.	T	TTC	1374.55	PASS	AB=0.982;AC=30;AF=0.556;AN=54;BaseQRankSum=-0.007;DP=532;FS=22.384;HRun=0;HaplotypeScore=112.6045;InbreedingCoeff=-0.4748;MQ=40.79;MQ0=31;MQRankSum=-1.019;QD=3.10;ReadPosRankSum=-0.346;VQSLOD=0.7683;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:24:35.62:36,0,36	1/1:7,0:7:7.99:59,8,0	0/0:32,0:4:12:0,12,153	0/0:45,0:6:9.01:0,9,107	0/1:21,0:21:0.26:0,0,12	0/1:16,0:16:33.29:96,0,33	0/1:26,0:25:70.46:156,0,70	0/1:21,0:20:99:221,0,105	0/1:31,0:30:64.92:115,0,65	0/1:9,0:8:39.79:40,0,190	1/1:10,0:9:7.84:78,8,0	0/1:21,0:20:41.58:88,0,42	0/1:15,0:14:22.20:22,0,33	1/1:14,0:14:1.82:5,2,0	0/1:12,0:12:32.65:33,0,81	0/1:22,0:22:17.89:18,0,227	0/1:30,0:26:46.05:46,0,67	0/1:3,4:7:4.52:5,0,74	0/1:18,0:17:87.75:88,0,171	0/1:20,0:20:21.51:239,0,22	1/1:19,0:14:4.24:28,4,0	0/1:14,0:12:32.64:64,0,33	1/1:9,0:9:1.82:5,2,0	0/1:28,0:26:5.69:6,0,141	0/1:13,0:12:0.51:1,0,29	0/1:21,0:20:25.13:25,0,342	0/1:15,0:13:51.23:51,0,80	./.
chr10	9978306	.	CTCTT	C	1962.92	PASS	AB=0.965;AC=23;AF=0.426;AN=54;BaseQRankSum=6.245;DP=565;FS=2.134;HRun=0;HaplotypeScore=118.2456;InbreedingCoeff=-0.7098;MQ=48.66;MQ0=24;MQRankSum=-4.221;QD=4.71;ReadPosRankSum=12.362;VQSLOD=-0.0374;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:26:20.15:20,0,111	0/1:1,7:8:9.74:117,0,10	0/0:46,0:9:6.83:0,7,192	0/0:58,0:13:16.83:0,17,242	0/0:20,0:20:32.43:0,32,221	0/1:16,0:16:83.74:84,0,87	0/1:23,0:23:63.95:64,0,94	0/1:29,0:29:99:366,0,219	0/1:29,0:28:53.53:54,0,90	0/1:8,0:8:49.85:50,0,73	0/1:19,0:18:26.18:26,0,147	0/1:17,1:18:80.08:105,0,80	0/1:16,0:15:54.20:115,0,54	0/1:16,0:16:10.72:11,0,49	0/1:11,2:13:46.37:46,0,61	0/1:14,1:15:11.22:73,0,11	0/1:31,0:28:60.31:60,0,67	0/1:9,0:9:30.28:30,0,109	0/1:14,0:13:66.24:135,0,66	0/1:17,1:18:37.36:133,0,37	0/1:14,0:11:5.20:5,0,23	0/1:14,0:13:8.70:9,0,110	0/1:10,0:10:12.41:12,0,52	0/1:31,0:30:99:129,0,150	0/0:13,0:13:17.26:0,17,112	0/1:21,0:21:40.57:305,0,41	0/1:17,0:15:75.31:166,0,75	./.
chr10	9978536	.	A	AACACACACAC	14062.05	PASS	AB=1.000;AC=51;AF=0.944;AN=54;BaseQRankSum=-0.055;DP=570;FS=1.761;HRun=0;HaplotypeScore=184.1092;InbreedingCoeff=0.5247;MQ=57.16;MQ0=6;MQRankSum=0.353;QD=25.57;ReadPosRankSum=1.000;VQSLOD=4.4450;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:21:7.93:267,8,0	1/1:13,0:13:24.08:775,24,0	0/0:20,0:16:9.03:0,9,164	0/1:23,0:20:0.42:0,0,94	1/1:19,0:19:9.02:223,9,0	1/1:22,0:23:33.07:482,33,0	1/1:24,0:24:27.05:299,27,0	1/1:37,0:37:55.87:1347,56,0	1/1:13,0:30:11.97:144,12,0	1/1:29,0:28:42.14:1440,42,0	1/1:13,0:13:11.99:381,12,0	1/1:12,0:18:15.04:450,15,0	1/1:24,0:24:33.11:957,33,0	1/1:13,0:22:15.05:516,15,0	1/1:16,15:31:18.06:493,18,0	1/1:15,10:25:15.05:614,15,0	1/1:12,2:14:12.04:520,12,0	1/1:5,0:5:9.01:213,9,0	1/1:16,0:18:21.05:551,21,0	1/1:21,0:32:18.06:478,18,0	1/1:8,0:7:3.01:85,3,0	1/1:14,0:14:18.04:366,18,0	1/1:10,0:18:12.04:238,12,0	1/1:17,0:17:3.01:68,3,0	1/1:25,0:25:45.06:902,45,0	1/1:22,0:21:48.16:1670,48,0	1/1:14,5:19:15.05:579,15,0	./.
chr10	9978550	.	C	CACACACACAC	8395.46	PASS	AB=1.000;AC=51;AF=0.944;AN=54;BaseQRankSum=-2.144;DP=564;FS=0.000;HRun=0;HaplotypeScore=165.7357;InbreedingCoeff=0.3291;MQ=45.58;MQ0=11;MQRankSum=2.070;QD=15.24;ReadPosRankSum=2.681;VQSLOD=3.8216;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:22:4.92:161,5,0	1/1:11,0:11:12.33:476,12,0	0/0:12,0:8:9.03:0,9,164	0/1:17,0:14:0.42:0,0,94	1/1:22,0:19:9.50:224,10,0	1/1:24,0:24:33.07:483,33,0	1/1:26,0:25:21.03:230,21,0	1/1:37,0:37:25.12:370,25,0	1/1:27,0:27:7.41:122,7,0	1/1:21,7:28:27.09:953,27,0	1/1:13,0:13:12.04:382,12,0	1/1:18,0:18:6.48:108,6,0	1/1:21,0:21:20.86:550,21,0	1/1:25,0:24:4.46:152,4,0	1/1:35,0:33:7.20:240,7,0	1/1:25,0:25:6.02:214,6,0	1/1:11,0:10:6.02:212,6,0	1/1:9,0:9:6.02:116,6,0	1/1:18,0:17:17.41:395,17,0	1/1:31,0:30:1.12:70,1,0	1/1:7,0:5:3.01:85,3,0	1/1:13,0:13:18.04:366,18,0	1/1:17,0:17:12.04:238,12,0	1/1:18,0:18:5.23:75,5,0	1/1:28,0:27:42.05:831,42,0	1/1:24,0:23:36.12:1192,36,0	1/1:22,0:22:3.01:150,3,0	./.
chr10	9978576	.	G	GAGAC	278.06	PASS	AB=0.761;AC=3;AF=0.054;AN=56;BaseQRankSum=0.426;DP=516;FS=2.339;HRun=0;HaplotypeScore=141.0335;InbreedingCoeff=-0.0652;MQ=45.00;MQ0=13;MQRankSum=-0.426;QD=3.52;ReadPosRankSum=1.931;VQSLOD=2.4789;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:19:23.68:0,24,350	0/0:12,0:12:20.36:0,20,125	0/0:9,0:3:2.99:0,3,23	0/0:15,0:3:8.62:0,9,54	0/1:12,17:26:51.21:92,0,51	0/1:22,0:22:0.35:0,0,93	0/0:27,0:26:27.48:0,27,144	0/0:22,0:22:62.70:0,63,477	0/0:21,0:21:24.59:0,25,196	0/0:26,0:25:49.04:0,49,703	0/0:13,0:13:15:0,15,159	0/0:17,0:17:23.93:0,24,356	0/0:18,0:18:30.04:0,30,372	0/0:24,0:23:22.60:0,23,308	0/0:29,0:28:33.03:0,33,488	0/0:24,0:24:50.98:0,51,681	0/0:15,0:13:26.96:0,27,370	0/0:10,0:10:7.03:0,7,303	0/0:18,0:18:30.66:0,31,354	0/0:23,0:22:17.51:0,18,210	0/0:6,0:5:8.89:0,9,86	0/0:13,0:13:12.01:0,12,159	0/0:18,0:18:26.99:0,27,433	0/0:13,0:13:18.06:0,18,296	0/1:13,14:26:61.21:274,0,61	0/0:21,0:20:43.87:0,44,657	0/0:19,0:18:40.16:0,40,551	0/0:4,0:3:9:0,9,117
chr10	9978582	.	G	GAC	987.21	PASS	AB=0.941;AC=11;AF=0.196;AN=56;BaseQRankSum=-3.989;DP=534;FS=16.940;HRun=0;HaplotypeScore=127.5541;InbreedingCoeff=0.0827;MQ=46.01;MQ0=13;MQRankSum=-3.305;QD=5.28;ReadPosRankSum=0.927;VQSLOD=2.0820;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:20:24.93:0,25,125	0/0:11,0:11:16.68:0,17,96	0/0:12,0:7:1.19:0,1,64	0/0:23,0:4:5.49:0,5,62	0/0:29,0:26:18.93:0,19,126	0/1:7,16:23:22.80:188,0,23	1/1:5,23:28:9.99:432,10,0	0/1:25,0:25:93.93:115,0,94	1/1:13,4:17:2.56:290,3,0	0/1:27,0:26:37.54:38,0,140	0/0:15,0:15:14.42:0,14,92	0/0:18,0:18:25.31:0,25,129	0/0:19,0:19:0.38:0,0,66	0/1:23,0:22:15.93:16,0,45	0/0:24,0:23:21.69:0,22,124	0/0:27,0:27:54.84:0,55,293	0/0:14,0:13:22.36:0,22,111	0/0:12,0:12:22.75:0,23,131	0/1:17,0:17:27.89:28,0,82	0/0:20,0:19:8.15:0,8,59	0/1:6,0:5:0.57:1,0,13	0/0:16,0:16:18.83:0,19,83	0/0:19,0:19:24.40:0,24,109	0/0:14,0:14:17.40:0,17,74	0/0:29,0:27:24.47:0,24,156	0/1:20,0:19:20.78:21,0,163	0/0:19,0:18:25.59:0,26,172	0/0:4,0:3:8.47:0,8,43
chr10	9979605	.	GACAC	G	11152.93	PASS	AB=1.000;AC=45;AF=0.804;AN=56;BaseQRankSum=5.113;DP=842;FS=13.480;HRun=0;HaplotypeScore=208.0370;InbreedingCoeff=0.4185;MQ=59.42;MQ0=26;MQRankSum=1.631;QD=15.34;ReadPosRankSum=0.234;VQSLOD=3.1494;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:32,0:32:99:404,0,202	1/1:12,0:12:17.77:141,18,0	0/0:47,0:21:52.78:0,53,846	0/0:35,0:24:51.60:0,52,664	0/1:32,0:31:24.26:24,0,381	0/1:28,0:28:99:294,0,221	0/1:25,0:25:99:359,0,159	1/1:31,0:29:76.82:825,77,0	0/1:35,0:35:99:508,0,348	1/1:27,0:24:48.09:644,48,0	1/1:21,0:19:46.75:445,47,0	1/1:28,1:29:65.02:535,65,0	1/1:23,3:25:63.89:577,64,0	1/1:22,2:24:32.92:323,33,0	1/1:37,0:35:59.79:474,60,0	1/1:31,1:30:80.45:755,80,0	1/1:30,0:29:38.06:313,38,0	1/1:15,0:14:26.91:229,27,0	1/1:16,0:14:17.87:290,18,0	1/1:33,0:31:24.86:390,25,0	1/1:32,2:31:51.69:463,52,0	1/1:29,2:29:53.72:479,54,0	1/1:32,0:30:6.56:309,7,0	1/1:43,0:39:75.68:540,76,0	0/0:32,0:32:26.79:0,27,382	1/1:26,3:28:67.51:763,68,0	1/1:46,3:46:82.70:694,83,0	1/1:22,2:19:38.74:375,39,0
chr10	9979611	.	CAG	C	16188.25	PASS	AB=0.782;AC=45;AF=0.804;AN=56;BaseQRankSum=-4.240;DP=882;FS=9.794;HRun=0;HaplotypeScore=172.1939;InbreedingCoeff=0.1692;MQ=58.87;MQ0=33;MQRankSum=0.464;QD=20.60;ReadPosRankSum=0.671;VQSLOD=4.8873;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:31,3:34:32:357,0,32	1/1:0,11:11:17.98:269,18,0	0/0:55,0:21:46.55:0,47,582	0/0:41,0:24:4.67:0,5,321	1/1:3,29:31:59.87:806,60,0	0/1:31,2:33:51.85:285,0,52	0/1:24,1:25:31.57:209,0,32	1/1:21,13:31:82.22:808,82,0	0/1:38,0:38:86.54:279,0,87	1/1:3,26:26:38.94:780,39,0	1/1:9,12:19:46.45:608,46,0	1/1:1,27:28:58.37:875,58,0	1/1:5,20:24:52.76:777,53,0	0/1:3,21:24:10.19:336,0,10	1/1:1,34:33:57.17:862,57,0	1/1:11,20:29:85.43:1055,85,0	1/1:3,30:32:39.55:635,40,0	0/1:4,15:18:6.93:334,0,7	1/1:6,15:19:45.33:370,45,0	1/1:1,30:29:53.94:787,54,0	1/1:8,29:34:21.61:600,22,0	1/1:5,26:29:6.90:596,7,0	1/1:3,27:28:31.02:624,31,0	1/1:5,40:40:78.25:1155,78,0	1/1:2,29:31:47.96:701,48,0	1/1:7,27:33:25.56:759,26,0	1/1:4,42:43:56.74:1001,57,0	0/1:6,22:23:16.79:320,0,17
chr10	9980171	.	A	AT	16651.30	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=1.484;DP=623;FS=0.000;HRun=8;HaplotypeScore=112.4975;InbreedingCoeff=0.9792;MQ=78.92;MQ0=0;MQRankSum=-6.904;QD=28.37;ReadPosRankSum=5.269;VQSLOD=3.4988;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,29:29:72.21:831,72,0	1/1:2,4:6:12.04:139,12,0	0/0:23,0:23:26.76:0,27,307	0/0:12,0:10:17.93:0,18,150	1/1:2,28:30:72.21:831,72,0	1/1:1,27:28:75.22:866,75,0	1/1:3,14:17:39.12:450,39,0	1/1:6,29:35:90.25:1025,90,0	1/1:2,16:18:42.12:485,42,0	1/1:0,16:16:48.14:554,48,0	1/1:3,13:16:39.11:448,39,0	1/1:2,24:26:66.20:762,66,0	1/1:0,20:20:57.17:657,57,0	1/1:7,17:24:48.14:554,48,0	1/1:3,16:19:36.11:416,36,0	1/1:1,19:20:54.16:623,54,0	1/1:0,24:24:60.18:692,60,0	1/1:4,13:17:39.10:439,39,0	1/1:3,14:17:39.01:430,39,0	1/1:3,26:29:53.77:873,54,0	1/1:1,21:22:45.13:519,45,0	1/1:1,32:33:90.23:1024,90,0	1/1:2,20:22:54.16:624,54,0	1/1:3,13:16:36.11:415,36,0	1/1:4,23:27:66.20:762,66,0	1/1:2,24:26:70.10:815,70,0	1/1:2,25:27:72.21:831,72,0	1/1:4,19:23:51.15:589,51,0
chr10	9982728	.	GT	G	29353.99	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=7.695;DP=939;FS=3.080;HRun=2;HaplotypeScore=139.0778;InbreedingCoeff=0.9997;MQ=83.39;MQ0=0;MQRankSum=-9.636;QD=36.19;ReadPosRankSum=6.564;VQSLOD=3.8684;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,25:25:75.24:974,75,0	1/1:0,14:14:42.14:543,42,0	0/0:41,0:40:99:0,117,1665	0/0:36,0:36:83.72:0,84,1290	0/0:28,0:28:84.26:0,84,1214	1/1:0,31:31:87.28:1130,87,0	1/1:1,23:24:66.21:856,66,0	1/1:1,38:39:99:1451,114,0	1/1:0,48:48:99:1870,144,0	1/1:2,57:59:99:2171,171,0	1/1:0,33:33:87.28:1130,87,0	1/1:1,39:40:99:1402,108,0	1/1:1,41:41:99:1479,114,0	1/1:1,48:49:99:1792,138,0	1/1:0,50:50:99:1792,138,0	1/1:1,38:39:99:1402,108,0	1/1:0,28:28:78.25:1013,78,0	1/1:1,15:16:45.14:573,45,0	1/1:0,27:27:81.26:1051,81,0	1/1:1,28:29:78.25:1012,78,0	1/1:1,50:51:99:1792,138,0	1/1:0,15:15:41.86:545,42,0	1/1:1,34:35:93.20:1207,93,0	1/1:2,32:34:87.28:1130,87,0	0/0:23,0:23:69.22:0,69,1011	1/1:1,36:37:99:1367,108,0	1/1:1,36:37:99:1323,102,0	1/1:0,9:9:27.09:351,27,0
chr10	9982868	.	G	GAAAC	33566.11	PASS	AB=0.636;AC=47;AF=0.839;AN=56;BaseQRankSum=-12.039;DP=821;FS=1.555;HRun=0;HaplotypeScore=99.0176;InbreedingCoeff=0.8537;MQ=65.95;MQ0=2;MQRankSum=-0.889;QD=47.68;ReadPosRankSum=0.486;VQSLOD=5.6305;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,28:35:75.16:1736,75,0	1/1:2,8:10:21.07:515,21,0	0/0:20,0:17:14.23:0,14,293	0/0:15,0:12:7.23:0,7,167	0/0:43,0:42:93.31:0,93,1524	1/1:2,27:29:72.25:1765,72,0	1/1:2,26:28:66.23:1582,66,0	1/1:11,28:41:93.12:1727,93,0	1/1:10,23:32:54.19:1324,54,0	1/1:10,31:44:99:2255,102,0	1/1:4,32:38:84.20:1996,84,0	1/1:6,10:16:27.09:662,27,0	1/1:6,19:27:57.19:1359,57,0	1/1:9,23:33:60.20:1471,60,0	1/1:11,17:29:39.13:956,39,0	1/1:5,21:27:60.21:1471,60,0	1/1:4,23:27:54.19:1324,54,0	1/1:5,15:20:36.12:883,36,0	0/1:9,11:21:7.88:632,0,8	1/1:10,47:57:99:3046,129,0	1/1:8,15:23:42.14:1030,42,0	1/1:7,25:34:57.19:1390,57,0	1/1:5,19:25:45.07:1042,45,0	1/1:6,21:27:57.20:1398,57,0	0/0:39,0:39:99:0,99,1647	1/1:4,28:32:81.27:1935,81,0	1/1:10,25:36:66.14:1557,66,0	1/1:2,9:11:21.07:512,21,0
chr10	9983523	.	T	TCCC	26852.93	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-10.545;DP=556;FS=11.349;HRun=2;HaplotypeScore=74.2477;InbreedingCoeff=0.9968;MQ=85.90;MQ0=0;MQRankSum=-9.515;QD=56.65;ReadPosRankSum=5.437;VQSLOD=3.7185;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,20:21:42.13:967,42,0	1/1:2,11:13:30.06:642,30,0	0/0:27,0:27:75.24:0,75,1193	0/0:17,0:17:45.04:0,45,690	0/0:23,0:23:63.21:0,63,1053	1/1:2,16:18:45.15:1006,45,0	1/1:0,16:17:42.14:968,42,0	1/1:3,25:28:84.27:1801,84,0	1/1:2,32:34:96.33:2207,96,0	1/1:3,15:19:51.13:1095,51,0	1/1:2,13:15:33.11:760,33,0	1/1:4,16:20:51.65:1107,52,0	1/1:2,17:20:57.20:1258,57,0	1/1:1,19:20:54.14:1195,54,0	1/1:3,26:29:68.46:1540,68,0	1/1:2,24:26:75.21:1679,75,0	1/1:1,13:15:30.10:692,30,0	1/1:3,9:12:19.50:481,20,0	1/1:4,13:16:45.15:1024,45,0	1/1:0,21:21:60.21:1381,60,0	1/1:1,20:21:47.93:1104,48,0	1/1:2,14:16:36.12:828,36,0	1/1:1,15:16:48.16:1101,48,0	1/1:3,13:17:33.11:761,33,0	0/0:15,0:15:45.15:0,45,753	1/1:0,18:18:51.17:1127,51,0	1/1:5,27:32:72.25:1646,72,0	1/1:0,9:9:21.07:484,21,0
chr10	9985859	.	G	GAA	5651	PASS	AB=1.000;AC=51;AF=0.911;AN=56;BaseQRankSum=-4.123;DP=558;FS=2.749;HRun=14;HaplotypeScore=98.6292;InbreedingCoeff=0.3026;MQ=52.80;MQ0=15;MQRankSum=1.231;QD=10.20;ReadPosRankSum=-0.123;VQSLOD=3.8177;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:32,0:31:31.63:281,32,0	1/1:12,0:11:23.92:185,24,0	0/1:3,0:1:0:0,0,0	0/0:4,0:3:2.89:0,3,25	0/1:24,0:24:27.79:214,0,28	1/1:18,0:18:4.91:197,5,0	1/1:20,0:16:20.68:194,21,0	0/1:22,0:23:29.10:108,0,29	1/1:18,0:18:18.05:171,18,0	1/1:22,0:21:16.53:171,17,0	1/1:19,0:18:26.77:216,27,0	1/1:17,1:17:27.98:276,28,0	1/1:20,0:20:31.50:268,31,0	1/1:23,0:23:22.22:184,22,0	1/1:22,1:23:20.40:211,20,0	1/1:17,0:17:24.94:226,25,0	1/1:31,0:31:23.09:363,23,0	1/1:22,0:20:35.92:298,36,0	1/1:11,0:9:5.94:41,6,0	1/1:19,0:17:24.35:190,24,0	1/1:15,0:15:13.32:95,13,0	1/1:31,0:28:26.74:311,27,0	1/1:19,0:19:14.75:114,15,0	1/1:34,0:33:54.56:495,55,0	1/1:25,0:24:26.88:207,27,0	1/1:21,0:21:34.88:261,35,0	1/1:21,1:21:31.21:264,31,0	1/1:8,1:7:11.98:109,12,0
chr10	9985871	.	A	AAG	12515.34	PASS	AB=0.591;AC=50;AF=0.893;AN=56;BaseQRankSum=-6.993;DP=601;FS=0.000;HRun=0;HaplotypeScore=72.1210;InbreedingCoeff=0.5813;MQ=62.42;MQ0=11;MQRankSum=1.882;QD=21.39;ReadPosRankSum=6.251;VQSLOD=4.7965;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,22:31:47.01:637,47,0	1/1:0,11:11:26.98:397,27,0	0/0:8,0:5:14.75:0,15,120	0/0:8,0:7:17.92:0,18,173	0/1:8,2:26:46.91:415,0,47	1/1:2,14:17:24.52:424,25,0	1/1:5,13:18:10.63:375,11,0	1/1:5,19:26:11.12:491,11,0	1/1:1,16:20:31.58:388,32,0	1/1:2,20:23:56.83:677,57,0	1/1:3,17:20:47.45:549,47,0	1/1:2,13:15:27.86:440,28,0	1/1:3,20:24:35.94:533,36,0	1/1:3,17:21:24:353,24,0	1/1:4,17:23:32.84:447,33,0	1/1:1,21:23:32.93:463,33,0	1/1:3,29:34:45.83:767,46,0	1/1:4,21:24:36.07:568,36,0	1/1:5,17:20:44.86:435,45,0	1/1:2,14:15:32.59:418,33,0	1/1:2,10:14:14.20:205,14,0	1/1:7,26:31:66.11:772,66,0	1/1:1,15:19:23.69:284,24,0	1/1:2,31:33:59.38:916,59,0	0/1:8,1:25:43.47:248,0,43	1/1:3,19:22:50.93:673,51,0	1/1:3,19:24:32.80:477,33,0	1/1:4,4:6:11.99:164,12,0
chr10	9986213	.	TG	T	789.65	PASS	AB=0.929;AC=10;AF=0.179;AN=56;BaseQRankSum=0.816;DP=449;FS=15.097;HRun=10;HaplotypeScore=64.8852;InbreedingCoeff=0.2312;MQ=71.61;MQ0=1;MQRankSum=-0.144;QD=5.81;ReadPosRankSum=1.628;VQSLOD=0.3670;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:51.14:0,51,562	0/1:6,1:7:11.02:11,0,109	0/0:13,0:11:18.05:0,18,196	0/0:12,0:11:5.75:0,6,65	1/1:4,15:19:38.97:338,39,0	0/0:5,0:8:5.85:0,6,47	0/0:10,0:16:32.37:0,32,208	0/0:26,0:26:7.81:0,8,283	0/0:3,0:7:11.53:0,12,76	0/1:15,1:16:4.99:5,0,178	0/0:9,1:10:1.02:0,1,232	0/0:18,1:19:16.05:0,16,390	0/0:17,0:17:34.62:0,35,351	0/0:17,1:18:23.56:0,24,425	0/1:25,1:26:3.66:4,0,399	0/0:15,2:17:7.03:0,7,306	0/0:29,3:33:10.46:0,10,659	0/1:15,2:17:7.01:7,0,369	0/1:18,0:18:11.28:11,0,259	0/1:8,1:9:11.02:11,0,118	0/0:16,0:15:30.08:0,30,328	0/0:10,0:10:15.03:0,15,157	0/0:11,0:11:9.27:0,9,92	0/0:25,0:25:51.58:0,52,542	1/1:4,20:24:62.98:546,63,0	0/0:12,0:12:15.03:0,15,152	0/0:11,0:11:26.99:0,27,264	0/0:7,0:7:21.04:0,21,222
chr10	9990258	.	TTCTCTCTC	T	5407.94	PASS	AB=0.793;AC=31;AF=0.574;AN=54;BaseQRankSum=4.155;DP=588;FS=2.450;HRun=0;HaplotypeScore=150.0034;InbreedingCoeff=0.0861;MQ=61.08;MQ0=9;MQRankSum=-5.586;QD=12.52;ReadPosRankSum=0.995;VQSLOD=3.7377;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:23:44.17:112,0,44	1/1:9,3:12:12.04:252,12,0	0/0:17,0:11:3.01:0,3,42	./.	0/0:32,0:32:17.78:0,18,489	0/1:11,0:29:14.64:413,0,15	1/1:6,0:15:9.03:167,9,0	0/0:27,0:26:13.20:0,13,107	1/1:21,0:32:18.49:335,18,0	0/1:29,0:30:59.43:315,0,59	0/1:9,4:14:5.29:274,0,5	1/1:13,0:15:2.93:188,3,0	1/1:15,1:24:11.42:119,11,0	0/1:14,0:25:10.18:88,0,10	0/1:18,13:31:5.68:485,0,6	1/1:12,8:20:13.16:473,13,0	0/1:12,7:20:50.12:247,0,50	0/1:15,3:18:35.79:64,0,36	0/0:9,0:9:1.25:0,1,3	0/1:12,0:19:13.85:14,0,113	0/0:15,0:19:18.03:0,18,246	0/1:13,7:20:53.87:111,0,54	1/1:6,4:10:8.94:91,9,0	0/1:21,1:22:3.57:180,0,4	0/0:26,0:25:30.05:0,30,583	1/1:8,14:22:45.04:940,45,0	1/1:10,7:18:21.07:488,21,0	1/1:11,0:11:3.01:50,3,0
chr10	9990293	.	TCTCTCTCC	T	3670.90	PASS	AB=0.974;AC=20;AF=0.357;AN=56;BaseQRankSum=12.863;DP=585;FS=79.671;HRun=0;HaplotypeScore=153.3178;InbreedingCoeff=-0.5872;MQ=56.32;MQ0=16;MQRankSum=-6.799;QD=8.80;ReadPosRankSum=6.279;VQSLOD=-0.6184;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:28:99:107,0,286	0/1:7,1:8:52.01:182,0,52	0/0:32,0:13:36.93:0,37,294	0/0:31,0:12:4.90:0,5,134	0/0:22,0:22:47.49:0,47,786	0/1:34,0:33:99:282,0,229	0/1:16,0:15:86.20:86,0,118	0/0:23,0:20:49.13:0,49,532	0/1:25,0:24:99:188,0,188	0/1:19,10:29:99:301,0,282	0/1:14,1:15:99:209,0,142	0/1:17,0:17:71.65:72,0,145	0/1:18,0:18:41.61:42,0,213	0/1:29,0:29:19.88:20,0,322	0/1:32,0:32:99:309,0,392	0/1:24,1:25:99:357,0,256	0/1:20,0:20:99:156,0,154	0/1:15,0:13:47.87:48,0,150	0/0:4,0:4:8.85:0,9,63	0/0:18,0:18:0.33:0,0,105	0/0:20,0:19:35.87:0,36,572	0/1:23,0:23:99:102,0,263	0/1:11,0:11:31.70:32,0,119	0/1:20,1:21:64.79:65,0,202	0/0:18,0:17:29.87:0,30,726	0/1:23,0:23:88.64:783,0,89	0/1:21,0:20:99:323,0,131	0/1:7,0:7:8.95:9,0,63
chr10	9992106	.	T	TACACACAC	10107.76	PASS	AB=0.870;AC=46;AF=0.821;AN=56;BaseQRankSum=-2.391;DP=729;FS=9.887;HRun=0;HaplotypeScore=309.2063;InbreedingCoeff=0.3794;MQ=44.40;MQ0=11;MQRankSum=-2.587;QD=16.99;ReadPosRankSum=2.553;VQSLOD=2.1719;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:34,0:38:4.18:115,4,0	1/1:8,6:15:18.06:683,18,0	0/0:50,0:15:14.49:0,14,302	0/0:53,0:21:16.89:0,17,302	1/1:23,0:28:2.97:105,3,0	0/1:23,0:29:3.86:7,0,4	1/1:32,0:39:7.06:70,7,0	1/1:23,0:23:36.12:1090,36,0	1/1:16,0:17:4.72:17,5,0	1/1:26,1:29:26.27:728,26,0	1/1:11,3:19:4.40:66,4,0	1/1:29,0:35:16.03:264,16,0	1/1:19,0:26:32.78:1045,33,0	1/1:20,0:24:19.17:288,19,0	0/0:21,4:29:1.83:0,2,3	1/1:14,8:28:34.35:1230,34,0	1/1:12,6:18:20.85:787,21,0	1/1:12,1:14:8.49:486,8,0	1/1:19,0:19:22.30:628,22,0	0/1:15,0:19:9.89:97,0,10	0/1:25,0:25:2.49:40,0,2	0/1:11,0:14:2.92:12,0,3	1/1:14,0:17:1.81:5,2,0	1/1:26,0:32:4.06:11,4,0	1/1:14,0:22:6.01:209,6,0	1/1:16,1:20:31.66:933,32,0	1/1:18,7:30:12.69:606,13,0	1/1:4,3:11:15.05:583,15,0
chr10	9992958	.	G	GCGCA	3639.34	PASS	AB=0.980;AC=32;AF=0.593;AN=54;BaseQRankSum=9.215;DP=565;FS=4.766;HRun=0;HaplotypeScore=182.4774;InbreedingCoeff=-0.6429;MQ=45.36;MQ0=3;MQRankSum=-7.116;QD=6.45;ReadPosRankSum=3.900;VQSLOD=2.1937;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:34,0:35:43.72:167,0,44	0/1:15,0:15:56.73:57,0,78	./.	0/1:5,0:4:14.01:15,0,14	0/1:8,9:18:15.74:167,0,16	0/1:16,0:16:53.44:117,0,53	0/1:29,0:29:61.03:72,0,61	0/1:33,0:29:4.30:4,0,238	0/1:19,0:20:23.93:162,0,24	0/1:30,0:30:92.62:236,0,93	0/1:12,0:12:10.89:88,0,11	1/1:30,0:30:41.92:432,42,0	1/1:22,0:22:20.64:346,21,0	0/1:32,0:32:8.08:259,0,8	0/1:14,0:14:33.82:60,0,34	0/1:15,0:15:13.07:57,0,13	0/1:26,0:26:28.22:127,0,28	0/1:15,0:15:20.11:165,0,20	0/1:17,0:15:23.96:24,0,66	0/1:15,0:15:34.79:51,0,35	0/1:30,0:30:5.20:5,0,79	0/1:21,0:19:19.19:19,0,41	0/1:22,0:21:31.96:37,0,32	1/1:13,0:13:4.98:38,5,0	1/1:6,14:22:4.40:237,4,0	0/1:29,0:29:99:241,0,123	0/1:14,0:14:24.79:66,0,25	1/1:14,0:14:36.08:394,36,0
chr10	9992966	.	A	ACACACACG	15746.35	PASS	AB=0.788;AC=48;AF=0.889;AN=54;BaseQRankSum=-0.557;DP=665;FS=2.207;HRun=0;HaplotypeScore=176.7230;InbreedingCoeff=0.1435;MQ=43.70;MQ0=6;MQRankSum=-3.419;QD=24.08;ReadPosRankSum=5.011;VQSLOD=4.0730;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:11,21:35:5.02:419,0,5	1/1:7,8:18:7.96:307,8,0	./.	0/0:5,0:4:8.51:0,9,55	0/1:19,0:19:87.50:110,0,87	1/1:6,12:18:11.34:454,11,0	1/1:10,23:33:11.76:475,12,0	1/1:29,0:25:22.91:784,23,0	1/1:5,15:23:11.87:497,12,0	1/1:8,22:34:55.70:1511,56,0	1/1:2,13:16:8.98:385,9,0	1/1:4,30:37:41.97:1794,42,0	1/1:10,16:34:35.48:1151,35,0	1/1:9,23:34:29.91:1142,30,0	0/1:4,13:19:13.23:248,0,13	1/1:5,14:20:5.70:257,6,0	1/1:8,16:25:13.29:457,13,0	1/1:1,14:17:20.65:853,21,0	1/1:21,0:18:18.14:570,18,0	1/1:5,11:21:5.91:256,6,0	1/1:14,22:47:14.39:300,14,0	1/1:4,19:23:3:52,3,0	1/1:8,14:22:4.93:193,5,0	1/1:3,9:15:6.02:197,6,0	0/1:23,0:23:0.92:117,0,1	1/1:10,25:38:72.06:1469,72,0	1/1:4,9:15:14.92:467,15,0	1/1:4,8:15:36.12:1281,36,0
chr10	9992968	.	A	ACACACG	10524.32	PASS	AB=0.980;AC=39;AF=0.722;AN=54;BaseQRankSum=6.065;DP=673;FS=5.771;HRun=0;HaplotypeScore=176.7270;InbreedingCoeff=-0.2345;MQ=43.87;MQ0=7;MQRankSum=-5.998;QD=15.97;ReadPosRankSum=8.846;VQSLOD=2.6649;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:33,2:35:3.49:487,0,3	1/1:19,0:19:7.86:179,8,0	./.	0/0:6,0:4:4.86:0,5,56	0/1:19,0:19:86.58:97,0,87	0/1:17,1:18:9.89:333,0,10	1/1:32,0:32:11.85:284,12,0	0/1:29,0:25:49.89:405,0,50	0/1:22,0:22:9.94:295,0,10	1/1:31,1:32:24.19:880,24,0	1/1:17,0:17:8.98:244,9,0	1/1:37,0:38:21.03:1112,21,0	0/1:33,1:35:8.10:773,0,8	1/1:34,1:35:12.81:743,13,0	0/1:21,0:21:13.24:154,0,13	0/1:19,0:19:15.04:154,0,15	1/1:22,1:23:13.40:353,13,0	0/1:19,0:19:0.30:497,0,0	0/1:23,1:20:63.03:315,0,63	1/1:21,0:21:8.91:187,9,0	0/1:47,1:48:32.48:102,0,32	1/1:24,0:22:3:52,3,0	0/1:23,1:23:37.97:170,0,38	1/1:14,0:14:3.01:81,3,0	0/1:24,0:24:11.64:100,0,12	1/1:34,4:38:69.72:1152,70,0	1/1:14,0:14:14.96:329,15,0	1/1:11,4:15:36.12:1045,36,0
chr10	9992972	.	A	ACG	2906.11	PASS	AB=0.989;AC=33;AF=0.589;AN=56;BaseQRankSum=12.236;DP=667;FS=8.845;HRun=0;HaplotypeScore=172.0090;InbreedingCoeff=-0.5302;MQ=43.84;MQ0=7;MQRankSum=-9.578;QD=4.44;ReadPosRankSum=8.957;VQSLOD=0.3837;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:31,0:31:25.32:97,0,25	0/1:18,1:19:13.89:60,0,14	0/0:13,0:4:5.97:0,6,46	0/1:6,0:4:5.67:6,0,46	0/1:20,0:20:2.06:2,0,113	0/1:15,0:15:8.95:102,0,9	1/1:28,0:28:16.64:111,17,0	0/1:27,0:23:99:116,0,168	0/1:23,0:24:49.21:92,0,49	0/1:31,1:32:63.68:255,0,64	0/1:16,0:16:8.21:84,0,8	0/1:38,0:39:66.84:351,0,67	0/1:33,3:36:78.03:220,0,78	1/1:30,2:32:3.70:227,4,0	0/1:21,0:21:58.73:59,0,74	0/1:20,0:20:51.23:51,0,59	1/1:21,0:21:14.05:121,14,0	0/1:19,0:19:49.09:147,0,49	0/1:24,0:20:75.22:75,0,206	0/1:22,0:22:41.60:68,0,42	0/1:47,0:47:9.49:9,0,96	1/1:23,0:21:11.04:50,11,0	0/1:23,0:22:48.21:74,0,48	1/1:14,0:14:3:29,3,0	0/1:24,0:24:17.57:18,0,42	0/1:37,0:37:42.55:286,0,43	0/1:18,0:18:46.07:46,0,90	1/1:16,0:16:15.94:308,16,0
chr10	9994344	.	TAC	T	18583.45	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=1.627;DP=695;FS=8.145;HRun=0;HaplotypeScore=92.4634;InbreedingCoeff=0.9780;MQ=78.71;MQ0=2;MQRankSum=-10.407;QD=29.83;ReadPosRankSum=7.744;VQSLOD=6.1284;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,33:34:72.23:936,72,0	1/1:2,10:12:30.10:390,30,0	0/0:34,0:33:74.81:0,75,1163	0/0:37,0:35:77.92:0,78,1233	1/1:1,11:12:24.08:311,24,0	1/1:2,13:15:33.11:429,33,0	1/1:7,38:45:89.83:1169,90,0	1/1:3,16:19:39.11:492,39,0	1/1:2,22:24:60.20:780,60,0	1/1:9,26:35:81.24:1025,81,0	1/1:1,8:9:21.07:273,21,0	1/1:3,26:28:60.19:780,60,0	1/1:3,30:34:90.29:1169,90,0	1/1:1,22:23:66.21:857,66,0	1/1:7,30:37:84.27:1092,84,0	1/1:2,23:25:60.16:780,60,0	1/1:7,27:34:75.10:975,75,0	1/1:5,24:29:66.21:858,66,0	1/1:5,13:17:36.09:438,36,0	1/1:4,15:19:41.74:507,42,0	1/1:3,42:45:99:1482,114,0	1/1:2,15:17:45.15:585,45,0	1/1:5,6:11:12.51:157,13,0	1/1:2,34:36:84.24:1091,84,0	1/1:1,16:17:48.16:624,48,0	1/1:3,20:23:60.18:765,60,0	1/1:3,11:15:29.71:383,30,0	1/1:0,6:6:18.06:234,18,0
chr10	9996770	.	GCTACTACTACTACTATTA	G	1028.13	PASS	AB=0.963;AC=17;AF=0.315;AN=54;BaseQRankSum=-3.251;DP=428;FS=12.306;HRun=0;HaplotypeScore=209.6657;InbreedingCoeff=0.1314;MQ=66.16;MQ0=7;MQRankSum=0.728;QD=6.59;ReadPosRankSum=0.737;VQSLOD=1.5560;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:15,1:16:25.81:26,0,130	0/1:8,0:8:3.44:3,0,625	0/0:31,0:18:30.06:0,30,833	0/0:22,0:11:18.03:0,18,580	0/0:29,0:29:45.19:0,45,1973	0/0:19,0:19:36.12:0,36,1473	0/0:16,0:16:3.01:0,3,125	1/1:21,0:21:22.10:282,22,0	0/0:12,0:12:12.04:0,12,593	0/1:26,0:26:19.79:20,0,1254	0/0:19,0:19:24.16:0,24,1801	0/1:12,1:13:56.81:131,0,57	0/1:8,1:9:66.93:142,0,67	1/1:8,0:8:3.01:139,3,0	0/0:12,0:12:3.01:0,3,108	0/0:12,0:12:27.08:0,27,806	0/1:9,0:9:6.93:7,0,468	0/0:18,0:18:18.06:0,18,698	0/1:11,0:11:33.05:33,0,166	0/1:10,0:10:85.85:86,0,143	1/1:9,0:9:2.80:13,3,0	1/1:7,0:7:20.91:199,21,0	0/1:8,1:9:94.61:110,0,95	./.	0/0:27,0:27:50.89:0,51,2570	0/0:24,0:24:30.66:0,31,1356	0/0:21,0:21:29.97:0,30,895	0/0:8,0:8:18.06:0,18,714
chr10	9996771	.	CTACTACTACTACTAT	C	1262.83	PASS	AB=0.990;AC=17;AF=0.315;AN=54;BaseQRankSum=-4.414;DP=425;FS=12.451;HRun=0;HaplotypeScore=185.9885;InbreedingCoeff=0.0844;MQ=66.34;MQ0=7;MQRankSum=1.035;QD=8.15;ReadPosRankSum=0.459;VQSLOD=1.8933;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:16,0:16:8.98:9,0,102	0/1:8,0:8:23.91:24,0,381	0/0:31,0:18:30.08:0,30,673	0/0:22,0:10:18.02:0,18,466	0/0:29,0:29:44.72:0,45,1621	0/0:19,0:19:36.12:0,36,1015	0/0:15,0:15:3.01:0,3,90	1/1:10,10:20:26.87:439,27,0	0/0:12,0:12:12.04:0,12,437	0/1:26,0:26:27.20:27,0,805	0/0:20,0:20:21.15:0,21,1259	0/1:13,0:13:37.60:111,0,38	0/1:9,0:9:43.24:128,0,43	1/1:3,5:8:3.01:119,3,0	0/0:13,0:13:3.01:0,3,69	0/0:12,0:12:2.09:0,2,471	0/1:9,0:9:8.38:8,0,268	0/0:17,0:17:14.59:0,15,464	0/1:11,0:11:62.90:112,0,63	0/1:9,1:10:58.70:140,0,59	1/1:9,0:9:3.01:50,3,0	1/1:7,0:7:20.82:166,21,0	0/1:9,0:9:84.99:93,0,85	./.	0/0:27,0:27:53.90:0,54,2292	0/0:22,0:22:5.91:0,6,806	0/0:22,0:22:26.83:0,27,542	0/0:8,0:8:18.06:0,18,480
chr10	9996777	.	CTACTACTAT	C	1935.52	PASS	AB=0.990;AC=29;AF=0.537;AN=54;BaseQRankSum=-1.773;DP=433;FS=3.032;HRun=0;HaplotypeScore=147.2962;InbreedingCoeff=-0.0045;MQ=66.20;MQ0=10;MQRankSum=-1.265;QD=6.56;ReadPosRankSum=1.656;VQSLOD=2.6719;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:16,0:16:9.51:10,0,15	0/1:8,0:8:19.79:77,0,20	0/0:29,0:16:30.08:0,30,433	0/0:23,0:9:18:0,18,323	0/0:29,0:29:47.39:0,47,1065	0/1:19,0:19:15.06:39,0,15	0/0:16,0:16:3.01:0,3,34	1/1:15,0:14:28.15:248,28,0	0/0:11,0:11:12.03:0,12,125	0/1:26,0:26:99:136,0,142	0/1:19,0:19:36.19:36,0,214	0/1:12,0:12:6.76:64,0,7	0/1:6,1:7:0.24:128,0,0	1/1:8,0:8:3.01:77,3,0	1/1:14,0:14:2.60:10,3,0	1/1:13,0:13:18.11:114,18,0	0/1:12,0:12:8.93:166,0,9	0/1:21,0:21:45.78:46,0,76	1/1:9,0:9:1.48:82,1,0	0/1:9,0:9:1.52:148,0,2	1/1:2,7:9:3.01:72,3,0	1/1:7,0:7:20.75:149,21,0	0/1:8,0:8:21.29:60,0,21	./.	0/0:29,0:29:58.34:0,58,1685	0/1:28,0:28:82.44:256,0,82	1/1:24,0:24:21.20:166,21,0	0/1:11,0:11:20.02:20,0,34
chr10	9996780	.	CTACTAT	C	5957.92	PASS	AB=1.000;AC=46;AF=0.852;AN=54;BaseQRankSum=-1.198;DP=425;FS=0.000;HRun=0;HaplotypeScore=117.1209;InbreedingCoeff=0.4345;MQ=66.42;MQ0=11;MQRankSum=-1.179;QD=17.47;ReadPosRankSum=0.834;VQSLOD=4.3738;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:14:8.03:38,8,0	1/1:9,0:9:26.96:340,27,0	0/0:29,0:16:30.06:0,30,331	0/0:23,0:9:18:0,18,273	0/0:30,0:30:2.61:0,3,731	1/1:18,0:18:34.30:237,34,0	1/1:16,0:16:2.96:19,3,0	1/1:13,0:12:28.46:228,28,0	1/1:10,0:10:11.65:66,12,0	1/1:24,0:24:65.57:563,66,0	0/1:21,0:21:14.01:402,0,14	1/1:12,0:12:8.63:81,9,0	1/1:7,0:7:11.62:133,12,0	1/1:6,0:6:3.01:56,3,0	1/1:1,11:12:3.01:69,3,0	1/1:13,0:13:36.05:572,36,0	1/1:14,0:14:33.52:484,34,0	1/1:19,1:20:1.42:259,1,0	1/1:9,0:9:23.48:165,23,0	1/1:7,2:9:14.78:185,15,0	1/1:9,0:9:3.01:54,3,0	1/1:7,0:7:20.75:149,21,0	1/1:8,0:8:10.95:84,11,0	./.	0/1:30,0:30:11.05:11,0,1163	1/1:30,0:30:75.77:892,76,0	1/1:21,0:21:29.97:563,30,0	1/1:9,0:9:9.47:309,9,0
chr10	9996783	.	CTAT	C	6315.02	PASS	AB=1.000;AC=48;AF=0.889;AN=54;BaseQRankSum=-0.738;DP=416;FS=1.269;HRun=0;HaplotypeScore=99.5215;InbreedingCoeff=0.5328;MQ=64.01;MQ0=12;MQRankSum=-0.581;QD=17.35;ReadPosRankSum=1.753;VQSLOD=4.8037;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,13:14:8.96:119,9,0	1/1:7,3:10:30.02:339,30,0	0/0:28,0:14:30.05:0,30,294	0/0:23,0:8:18:0,18,222	0/1:27,0:27:0.50:0,0,461	1/1:0,18:18:36.12:600,36,0	1/1:0,14:14:3.01:37,3,0	1/1:13,0:12:28.68:209,29,0	1/1:2,8:10:12.04:203,12,0	1/1:0,25:25:71.95:758,72,0	1/1:22,0:22:37.83:304,38,0	1/1:2,10:12:9.03:136,9,0	1/1:3,4:7:11.97:139,12,0	1/1:6,0:6:3.01:35,3,0	1/1:11,0:11:3:28,3,0	1/1:7,7:14:39.04:436,39,0	1/1:10,3:13:36.01:376,36,0	1/1:2,18:20:18.06:247,18,0	1/1:0,8:8:23.99:275,24,0	1/1:4,5:9:15.03:181,15,0	1/1:9,0:9:3.01:37,3,0	1/1:7,0:7:20.75:149,21,0	1/1:2,5:7:12.04:186,12,0	./.	0/1:30,0:30:11.63:12,0,679	1/1:1,28:29:80.99:878,81,0	1/1:0,20:20:29.99:381,30,0	1/1:4,5:9:18.06:249,18,0
chr10	9996804	.	CTACTAA	C	4120.09	PASS	AB=0.954;AC=23;AF=0.460;AN=50;BaseQRankSum=-5.902;DP=390;FS=6.135;HRun=0;HaplotypeScore=128.7033;InbreedingCoeff=0.2950;MQ=50.06;MQ0=10;MQRankSum=2.081;QD=18.99;ReadPosRankSum=2.231;VQSLOD=2.7108;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:8:8.94:0,9,69	1/1:8,0:8:23.97:315,24,0	./.	0/0:14,0:2:5.99:0,6,50	0/0:28,0:28:57.05:0,57,623	0/0:17,0:17:24.69:0,25,385	0/0:15,0:15:11.94:0,12,98	0/0:35,0:33:71.51:0,72,740	0/0:6,0:6:12.03:0,12,134	1/1:21,0:21:53.53:458,54,0	0/1:21,0:21:31.91:314,0,32	0/1:6,0:6:6.05:6,0,52	0/1:7,0:7:9.30:9,0,37	0/1:7,0:7:10.92:11,0,33	0/1:15,0:15:14.78:15,0,135	1/1:14,0:14:32.95:548,33,0	1/1:13,0:13:35.94:437,36,0	1/1:23,0:23:6.54:250,7,0	0/0:8,0:7:20.98:0,21,203	0/1:8,0:8:37.62:38,0,44	0/1:6,0:6:5.73:6,0,84	./.	0/1:4,0:4:5.05:5,0,62	./.	0/0:28,0:28:74.72:0,75,1100	1/1:25,1:26:65.91:803,66,0	1/1:20,1:21:33.01:586,33,0	0/1:5,12:17:12.83:319,0,13
chr10	9996807	.	CTAA	C	2514.28	PASS	AB=0.974;AC=27;AF=0.563;AN=48;BaseQRankSum=-1.389;DP=386;FS=0.000;HRun=0;HaplotypeScore=123.7304;InbreedingCoeff=0.4418;MQ=49.76;MQ0=9;MQRankSum=0.452;QD=10.93;ReadPosRankSum=5.917;VQSLOD=2.9753;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:8,0:8:9.21:21,0,9	1/1:5,3:8:18.01:173,18,0	./.	./.	0/0:28,0:28:40.25:0,40,331	0/1:17,0:17:39.84:40,0,57	0/0:13,0:13:9:0,9,80	0/0:37,0:35:65.89:0,66,678	1/1:6,0:6:1.52:4,2,0	1/1:19,1:20:32.96:284,33,0	1/1:3,0:21:20.88:152,21,0	0/1:7,0:7:14.50:15,0,33	0/1:7,0:7:8.80:9,0,12	0/0:8,0:8:12.39:0,12,94	0/0:15,0:15:15.45:0,15,153	1/1:8,7:15:42.03:403,42,0	1/1:10,3:13:35.94:318,36,0	1/1:21,3:24:21.87:216,22,0	0/1:9,0:8:9.05:9,0,125	0/1:8,0:8:4.84:5,0,28	0/0:7,0:7:8.98:0,9,94	./.	1/1:4,0:4:8.67:46,9,0	./.	0/0:26,0:26:62.66:0,63,613	1/1:19,5:24:51.01:491,51,0	1/1:13,8:21:33.04:336,33,0	0/1:14,4:18:0.12:168,0,0
chr10	9997395	.	A	ACACT	41368.03	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-11.617;DP=711;FS=3.254;HRun=0;HaplotypeScore=97.0941;InbreedingCoeff=0.9972;MQ=69.47;MQ0=1;MQRankSum=-6.716;QD=66.19;ReadPosRankSum=4.295;VQSLOD=7.3071;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,52:60:99:3931,141,0	1/1:0,13:13:33.11:921,33,0	0/0:19,0:19:49.41:0,49,942	0/0:17,0:17:51.11:0,51,934	0/0:26,0:26:75.26:0,75,1471	1/1:1,19:23:57.20:1585,57,0	1/1:2,12:15:30.10:831,30,0	1/1:9,20:33:87.24:2163,87,0	1/1:1,19:20:57.20:1587,57,0	1/1:0,10:11:29.77:707,30,0	1/1:0,16:18:42.14:1163,42,0	1/1:0,36:39:93.32:2596,93,0	1/1:0,21:24:60.21:1675,60,0	1/1:3,33:36:97.22:2664,97,0	1/1:4,27:33:81.28:2248,81,0	1/1:1,17:18:51.18:1423,51,0	1/1:0,27:29:66.23:1844,66,0	1/1:2,21:24:57.20:1586,57,0	1/1:3,16:21:60.20:1525,60,0	1/1:2,12:16:33.11:914,33,0	1/1:0,47:49:99:3355,120,0	1/1:2,17:21:33.11:909,33,0	1/1:0,14:19:42.06:1094,42,0	1/1:2,34:36:87.30:2414,87,0	0/0:24,0:24:72.25:0,72,1437	1/1:2,25:28:78.27:2145,78,0	1/1:0,24:28:57.20:1592,57,0	1/1:0,9:9:18.06:497,18,0
chr10	9999865	.	ATG	A	1350.28	PASS	AB=0.921;AC=25;AF=0.463;AN=54;BaseQRankSum=3.264;DP=810;FS=4.644;HRun=0;HaplotypeScore=122.5959;InbreedingCoeff=-0.3764;MQ=67.83;MQ0=4;MQRankSum=0.455;QD=2.10;ReadPosRankSum=1.137;VQSLOD=2.3374;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:38,5:43:4.50:4,0,579	0/1:18,0:18:13.01:13,0,201	./.	0/0:33,0:20:2.60:0,3,10	0/0:21,0:21:6:0,6,53	0/1:19,1:20:29.20:29,0,346	0/1:35,1:36:41.58:42,0,575	0/1:31,1:32:5.62:45,0,6	0/1:26,1:29:12.67:13,0,350	0/1:12,7:20:21.56:225,0,22	1/1:12,6:18:12.03:132,12,0	0/1:31,1:32:42.55:43,0,423	0/1:25,1:26:4.05:4,0,371	0/1:39,3:42:18.89:19,0,505	0/1:34,2:36:18.39:18,0,523	0/1:37,2:40:34.88:35,0,481	0/1:25,2:26:26.74:27,0,452	0/0:29,2:31:6.14:0,6,475	1/1:13,3:16:11.13:107,11,0	0/1:18,8:27:2.12:208,0,2	0/1:44,6:52:13.77:244,0,14	0/0:21,0:21:20.96:0,21,354	1/1:10,7:17:14.77:164,15,0	0/1:29,0:30:47:47,0,571	0/0:29,0:29:3:0,3,26	0/1:26,2:28:3.31:3,0,336	0/1:24,1:25:70.15:70,0,264	0/1:26,2:29:11.75:12,0,550
chr10	10000198	.	C	CTGTTTGTT	3550.93	PASS	AB=1.000;AC=10;AF=0.179;AN=56;BaseQRankSum=-10.848;DP=650;FS=14.323;HRun=0;HaplotypeScore=234.3371;InbreedingCoeff=0.2164;MQ=63.83;MQ0=1;MQRankSum=-3.122;QD=18.40;ReadPosRankSum=-6.032;VQSLOD=-0.0807;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:6.20:0,6,929	0/0:13,0:13:0.09:0,0,382	0/0:17,0:17:42.99:0,43,868	0/0:10,0:9:18.02:0,18,374	1/1:4,14:19:42.99:1396,43,0	0/0:22,0:22:33.18:0,33,993	0/1:17,0:17:6.38:6,0,656	0/1:28,0:28:62.83:63,0,755	0/0:23,0:23:12.24:0,12,917	0/1:28,0:28:13.56:14,0,998	0/0:23,0:22:29.17:0,29,905	0/0:31,0:31:28.76:0,29,1334	0/1:32,0:32:24.74:25,0,1093	0/1:17,0:17:30.74:31,0,591	0/0:29,0:29:58.41:0,58,1378	0/0:25,0:25:19.35:0,19,1103	0/0:22,0:22:21.07:0,21,767	0/0:19,0:19:20.62:0,21,764	0/1:22,0:22:29.55:30,0,566	0/0:28,0:28:42.11:0,42,1017	0/0:17,0:17:15.06:0,15,666	0/0:26,0:26:42.49:0,42,1205	0/0:17,0:17:6.99:0,7,687	0/0:21,0:21:21.59:0,22,718	1/1:9,20:30:54.19:1987,54,0	0/0:22,0:22:19.23:0,19,977	0/0:41,0:39:59.35:0,59,1737	0/0:22,0:22:10.21:0,10,957
chr10	10002297	.	G	GAA	1381.02	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=2.216;DP=652;FS=0.000;HRun=9;HaplotypeScore=80.5363;InbreedingCoeff=0.9908;MQ=69.30;MQ0=0;MQRankSum=-0.481;QD=32.88;ReadPosRankSum=-2.046;VQSLOD=3.3345;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,123,1288	0/0:9,0:9:18.03:0,18,192	0/0:17,0:16:32.86:0,33,327	0/0:17,0:15:27.03:0,27,287	1/1:1,14:17:50.49:614,50,0	0/0:22,0:22:57.12:0,57,606	0/0:23,0:23:57.11:0,57,606	0/0:34,0:34:79.45:0,79,851	0/0:16,0:16:45.11:0,45,479	0/0:27,0:27:69.15:0,69,734	0/0:21,0:21:54.13:0,54,574	0/0:24,0:24:69.16:0,69,727	0/0:23,0:23:69.17:0,69,732	0/0:19,0:21:35.99:0,36,493	0/0:14,0:14:39.08:0,39,407	0/0:23,0:23:60.13:0,60,632	0/0:33,0:33:87.17:0,87,913	0/0:35,0:35:99:0,105,1104	0/0:29,0:29:75.15:0,75,786	0/0:18,0:18:48.11:0,48,509	0/0:16,0:16:18.49:0,18,384	0/0:28,0:28:81.16:0,81,844	0/0:24,0:24:54.11:0,54,575	0/0:34,0:34:87.18:0,87,916	1/1:1,23:25:60.93:889,61,0	0/0:20,0:21:53.85:0,54,554	0/0:25,0:25:66.09:0,66,688	0/0:11,0:11:27:0,27,271
chr10	10006158	.	G	GA	2842.73	PASS	AB=0.751;AC=27;AF=0.482;AN=56;BaseQRankSum=-5.552;DP=593;FS=29.270;HRun=13;HaplotypeScore=84.4670;InbreedingCoeff=0.2459;MQ=78.18;MQ0=0;MQRankSum=2.247;QD=7.36;ReadPosRankSum=-3.437;VQSLOD=-0.3805;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:9,28:39:1.17:237,0,1	0/1:8,1:9:4.41:4,0,110	0/0:19,0:17:4.14:0,4,31	0/0:12,0:12:9.47:0,9,54	0/0:4,0:26:42.75:0,43,125	1/1:1,14:15:30:271,30,0	0/1:10,11:21:12.33:295,0,12	1/1:13,17:31:1.03:355,1,0	0/1:5,18:26:12.29:189,0,12	0/1:22,2:25:2.97:3,0,234	0/1:19,0:20:7.41:7,0,190	0/1:10,14:25:27.13:152,0,27	0/1:9,9:19:26.68:173,0,27	1/1:5,10:15:21.02:195,21,0	0/0:19,2:23:25.82:0,26,302	0/0:10,3:13:0.15:0,0,128	0/0:34,0:39:65.45:0,65,507	0/0:22,0:22:43.09:0,43,274	1/1:6,15:22:21.12:290,21,0	1/1:5,15:21:11.27:219,11,0	1/1:5,13:20:20.70:168,21,0	1/1:6,13:19:0.36:130,0,0	1/1:11,15:27:0.45:136,0,0	1/1:3,8:12:3.12:148,3,0	0/0:2,0:18:32.58:0,33,96	0/1:16,3:19:46.13:46,0,125	0/0:25,0:28:59.07:0,59,374	0/0:4,0:4:8.91:0,9,62
chr10	10007452	.	A	ATT	2015.97	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-9.160;DP=743;FS=1.198;HRun=8;HaplotypeScore=88.4912;InbreedingCoeff=0.9993;MQ=83.36;MQ0=0;MQRankSum=-1.273;QD=37.33;ReadPosRankSum=1.590;VQSLOD=3.4905;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,105,1170	0/0:10,0:10:27.06:0,27,301	0/0:30,0:30:45.05:0,45,487	0/0:19,0:19:36.01:0,36,371	1/1:2,29:33:89.79:1376,90,0	0/0:21,0:21:57.13:0,57,626	0/0:23,0:23:66.18:0,66,735	0/0:34,0:34:87.10:0,87,926	0/0:28,0:28:72.17:0,72,794	0/0:29,0:29:78.19:0,78,870	0/0:26,0:26:72.17:0,72,795	0/0:22,0:22:54.12:0,54,602	0/0:26,0:26:66.13:0,66,726	0/0:23,0:23:69.13:0,69,740	0/0:32,0:32:84.19:0,84,927	0/0:37,0:37:99:0,108,1203	0/0:20,0:20:51.10:0,51,558	0/0:28,0:28:69.16:0,69,768	0/0:34,0:34:99:0,99,1103	0/0:33,0:33:93.25:0,93,1035	0/0:16,0:16:48.13:0,48,535	0/0:20,0:20:51.11:0,51,568	0/0:25,0:25:69.18:0,69,769	0/0:33,0:33:96.24:0,96,1058	1/1:1,20:21:48.16:762,48,0	0/0:40,0:40:99:0,105,1161	0/0:30,0:30:81.17:0,81,883	0/0:12,0:12:36.10:0,36,401
chr10	10008578	.	T	TAGAG	3456.49	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=10.263;DP=835;FS=2.753;HRun=0;HaplotypeScore=139.9728;InbreedingCoeff=0.9994;MQ=82.14;MQ0=0;MQRankSum=-7.767;QD=59.59;ReadPosRankSum=0.094;VQSLOD=5.3518;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,144,2620	0/0:12,0:12:36.12:0,36,683	0/0:20,0:20:57.20:0,57,1064	0/0:30,0:30:77.93:0,78,1393	1/1:3,23:27:54.19:1442,54,0	0/0:24,0:23:69.24:0,69,1310	0/0:24,0:24:71.98:0,72,1322	0/0:42,0:42:99:0,120,2236	0/0:37,0:37:99:0,108,1968	0/0:39,0:39:99:0,108,2020	0/0:25,0:25:69.24:0,69,1310	0/0:35,0:35:99:0,102,1873	0/0:37,0:37:99:0,99,1823	0/0:30,0:30:81.26:0,81,1506	0/0:34,0:34:93.32:0,93,1748	0/0:37,0:37:99:0,108,2032	0/0:22,0:22:66.20:0,66,1200	0/0:21,0:21:60.21:0,60,1122	0/0:19,0:19:54.19:0,54,1025	0/0:29,0:29:87.28:0,87,1620	0/0:44,0:44:99:0,132,2495	0/0:25,0:25:66.23:0,66,1242	0/0:29,0:29:84.25:0,84,1528	0/0:50,0:50:99:0,141,2657	1/1:5,25:31:75.26:2014,75,0	0/0:31,0:31:90.29:0,90,1634	0/0:19,0:19:57.20:0,57,1082	0/0:10,0:10:27.09:0,27,512
chr10	10009280	.	GCGCACA	G	713.38	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=2.921;DP=681;FS=0.766;HRun=0;HaplotypeScore=153.9955;InbreedingCoeff=0.9449;MQ=63.94;MQ0=17;MQRankSum=-3.048;QD=18.29;ReadPosRankSum=-0.870;VQSLOD=2.7750;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:94.83:0,95,2126	0/0:9,0:9:17.99:0,18,240	0/0:34,0:15:12.20:0,12,162	0/0:29,0:11:26.58:0,27,181	1/1:0,20:22:11.43:144,11,0	0/0:18,0:18:54.08:0,54,1420	0/0:36,0:36:98.44:0,98,1739	0/0:28,0:26:74.49:0,74,823	0/0:21,0:21:13.44:0,13,844	0/0:33,0:33:91.84:0,92,1032	0/0:8,0:8:18.06:0,18,307	0/0:28,0:28:78.20:0,78,2110	0/0:19,0:19:56.93:0,57,1129	0/0:21,0:20:54.12:0,54,1409	0/0:27,0:27:62.63:0,63,725	0/0:17,0:17:38.99:0,39,547	0/0:27,0:25:30.12:0,30,667	0/0:16,0:16:38.80:0,39,562	0/0:27,0:27:45.75:0,46,657	0/0:23,0:23:22.56:0,23,534	0/0:48,0:48:99:0,110,1394	0/0:27,0:27:68.58:0,69,1356	0/0:15,0:15:39.02:0,39,861	0/0:35,0:35:98.73:0,99,2132	1/1:9,8:17:42.04:686,42,0	0/0:26,0:25:67.73:0,68,739	0/0:24,0:24:55.71:0,56,702	0/0:12,0:12:32.41:0,32,362
chr10	10009282	.	GCA	G	2760.70	PASS	AB=0.872;AC=33;AF=0.635;AN=52;BaseQRankSum=8.462;DP=695;FS=2.178;HRun=0;HaplotypeScore=100.1124;InbreedingCoeff=0.2039;MQ=58.99;MQ0=21;MQRankSum=-0.567;QD=5.49;ReadPosRankSum=0.980;VQSLOD=2.9931;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:30.66:0,31,632	1/1:5,5:10:6.01:66,6,0	./.	./.	1/1:26,0:25:1.95:13,2,0	0/1:17,1:19:10.55:11,0,391	0/1:33,3:36:52.53:53,0,393	0/1:30,0:28:24.18:24,0,40	0/1:19,1:21:51.21:51,0,217	1/1:21,11:33:35.80:340,36,0	1/1:3,5:8:12.03:131,12,0	0/0:28,0:29:54.09:0,54,693	0/0:19,0:19:26.92:0,27,364	0/0:20,0:19:12.32:0,12,434	1/1:14,11:26:26.64:256,27,0	0/1:8,8:16:22.60:176,0,23	0/1:17,10:25:32.85:144,0,33	0/1:10,8:18:26.74:146,0,27	1/1:26,7:33:17.61:176,18,0	1/1:11,9:23:23.56:204,24,0	1/1:29,18:48:32.92:342,33,0	0/0:25,3:29:35.91:0,36,431	0/1:15,0:15:15.68:16,0,226	0/1:35,1:36:24.97:25,0,548	1/1:17,0:17:19.89:97,20,0	1/1:14,10:25:32.53:293,33,0	1/1:11,10:23:8.52:266,9,0	1/1:7,4:12:11.86:112,12,0
chr10	10011263	.	ATCATC	A	17640.54	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=11.725;DP=545;FS=5.196;HRun=0;HaplotypeScore=354.9264;InbreedingCoeff=0.8917;MQ=96.77;MQ0=0;MQRankSum=-13.046;QD=37.61;ReadPosRankSum=9.461;VQSLOD=3.5212;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:11,12:23:35.95:707,36,0	1/1:3,5:8:21.02:384,21,0	0/0:47,0:47:99:0,141,3951	0/0:28,0:29:83.93:0,84,2147	1/1:11,9:20:27.08:516,27,0	1/1:4,16:20:48.08:930,48,0	1/1:9,7:16:24.07:422,24,0	1/1:21,0:21:9.02:137,9,0	1/1:10,5:15:15.05:315,15,0	1/1:12,10:21:42.14:834,42,0	1/1:8,14:22:41.80:759,42,0	1/1:11,16:27:57.20:1184,57,0	1/1:6,13:19:42.13:844,42,0	1/1:8,12:20:42.14:867,42,0	1/1:8,17:25:57.18:1145,57,0	1/1:2,14:16:45.14:907,45,0	1/1:6,6:12:15.05:315,15,0	1/1:3,2:5:9.03:171,9,0	1/1:7,5:12:18.05:343,18,0	1/1:8,20:28:63.18:1184,63,0	1/1:5,4:9:12.04:252,12,0	1/1:8,20:28:77.96:1465,78,0	1/1:5,14:19:41.80:780,42,0	1/1:6,6:12:11.78:205,12,0	1/1:7,8:15:30.10:589,30,0	1/1:10,9:19:33.10:650,33,0	1/1:11,17:27:63.22:1294,63,0	1/1:2,6:8:21.07:441,21,0
chr10	10011273	.	ATCTAGCATCTAGTATCATCGC	A	44212.12	PASS	AC=50;AF=0.926;AN=54;BaseQRankSum=12.625;DP=347;FS=3.719;HRun=0;HaplotypeScore=335.8448;InbreedingCoeff=0.8739;MQ=123.10;MQ0=0;MQRankSum=-12.626;QD=164.97;ReadPosRankSum=12.742;VQSLOD=3.2160;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:0,12:12:33.11:1856,33,0	1/1:0,5:5:15.05:819,15,0	0/0:49,0:49:99:0,132,7677	0/0:30,0:30:84.26:0,84,4520	1/1:0,9:9:21.07:1099,21,0	1/1:0,16:16:48.16:2692,48,0	1/1:0,7:7:21.07:1144,21,0	./.	1/1:0,5:5:15.05:866,15,0	1/1:0,10:10:30.10:1732,30,0	1/1:0,14:14:42.14:2301,42,0	1/1:0,16:16:48.16:2767,48,0	1/1:0,12:13:39.13:2250,39,0	1/1:0,12:12:36.12:2077,36,0	1/1:0,17:17:51.18:2943,51,0	1/1:0,14:14:42.14:2424,42,0	1/1:0,6:6:15.05:866,15,0	1/1:0,2:2:6.02:346,6,0	1/1:0,5:5:15.05:866,15,0	1/1:0,20:20:60.21:3361,60,0	1/1:0,4:4:12.04:693,12,0	1/1:0,20:20:60.21:3411,60,0	1/1:0,14:14:39.13:2162,39,0	1/1:0,6:6:9.03:468,9,0	1/1:0,8:8:24.08:1354,24,0	1/1:0,9:9:27.09:1559,27,0	1/1:0,17:17:51.18:2944,51,0	1/1:0,7:7:21.07:1212,21,0
chr10	10011287	.	ATCATCGC	A	19709.03	PASS	AC=50;AF=0.926;AN=54;BaseQRankSum=11.485;DP=358;FS=0.000;HRun=0;HaplotypeScore=326.7977;InbreedingCoeff=0.8820;MQ=110.68;MQ0=0;MQRankSum=-11.620;QD=67.04;ReadPosRankSum=10.218;VQSLOD=3.7540;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:13:33.11:781,33,0	1/1:5,0:5:15.05:331,15,0	0/0:39,0:39:99:0,99,3377	0/0:24,0:25:63.17:0,63,1894	1/1:9,3:12:18.06:451,18,0	1/1:17,0:17:51.17:1184,51,0	1/1:7,0:7:21.07:460,21,0	./.	1/1:7,0:7:18.06:427,18,0	1/1:12,0:12:33.11:810,33,0	1/1:15,0:15:45.14:1010,45,0	1/1:17,0:17:51.18:1273,51,0	1/1:13,0:13:39.13:979,39,0	1/1:13,0:13:39.13:954,39,0	1/1:17,0:17:51.18:1280,51,0	1/1:15,0:15:45.15:1107,45,0	1/1:6,0:6:15.05:377,15,0	1/1:2,0:2:6.02:151,6,0	1/1:5,3:8:24.05:499,24,0	1/1:22,0:22:63.22:1457,63,0	1/1:4,0:4:12.04:301,12,0	1/1:22,0:22:66.22:1563,66,0	1/1:17,0:17:41.81:944,42,0	1/1:6,0:6:9.02:177,9,0	1/1:9,0:9:27.09:628,27,0	1/1:9,1:10:30.10:756,30,0	1/1:18,0:18:51.18:1281,51,0	1/1:7,0:7:21.07:528,21,0
chr10	10011291	.	TCG	T	5190.54	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=11.243;DP=365;FS=0.565;HRun=0;HaplotypeScore=333.9621;InbreedingCoeff=0.8242;MQ=103.84;MQ0=0;MQRankSum=-11.281;QD=16.85;ReadPosRankSum=9.281;VQSLOD=3.7551;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:13,1:14:34.41:213,34,0	1/1:5,0:5:14.54:129,15,0	0/0:36,0:36:93.31:0,93,1734	0/0:21,0:21:57.12:0,57,960	1/1:12,0:12:17.13:87,17,0	1/1:17,0:17:48.90:335,49,0	1/1:8,0:8:23.34:192,23,0	1/1:1,0:1:2.96:19,3,0	1/1:5,2:7:17.21:117,17,0	1/1:10,2:12:31.42:187,31,0	1/1:15,0:15:43.40:335,43,0	1/1:19,0:19:54.79:339,55,0	1/1:15,0:15:40.11:217,40,0	1/1:12,1:13:37.33:235,37,0	1/1:17,0:17:48.39:245,48,0	1/1:15,1:16:45.90:276,46,0	1/1:6,0:6:14.30:74,14,0	1/1:3,0:3:8.64:48,9,0	1/1:8,0:8:20.19:119,20,0	1/1:20,3:23:60.37:425,60,0	1/1:4,0:4:11.36:57,11,0	1/1:21,2:23:63.27:420,63,0	1/1:14,3:17:40.28:292,40,0	1/1:6,0:6:8.69:74,9,0	1/1:9,0:9:25.91:188,26,0	1/1:10,0:10:28.44:142,28,0	1/1:17,1:18:48.29:241,48,0	1/1:10,0:10:28.90:184,29,0
chr10	10011293	.	G	GT	400.21	PASS	AB=0.961;AC=20;AF=0.357;AN=56;BaseQRankSum=-7.266;DP=376;FS=27.225;HRun=0;HaplotypeScore=343.5654;InbreedingCoeff=-0.3564;MQ=101.25;MQ0=0;MQRankSum=2.272;QD=1.71;ReadPosRankSum=-9.346;VQSLOD=-0.5036;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:14,1:15:19.48:19,0,34	0/1:6,0:6:7.25:11,0,7	0/0:34,0:34:96.28:0,96,1294	0/0:21,0:22:54.75:0,55,729	0/0:12,0:12:12.22:0,12,34	0/1:16,1:17:14.17:14,0,49	0/1:11,0:11:7.12:73,0,7	1/1:3,0:3:6:70,6,0	0/1:8,0:8:6.99:7,0,17	0/0:12,0:12:2.61:0,3,44	0/1:14,1:15:28.60:36,0,29	0/1:17,3:20:44.09:46,0,44	0/1:14,1:15:14.75:15,0,47	0/0:13,0:13:5.64:0,6,46	0/0:17,0:17:34.63:0,35,101	0/1:15,1:16:31.35:31,0,51	0/1:7,0:7:11.48:11,0,17	0/1:3,0:3:5.77:33,0,6	0/1:8,0:8:15.94:32,0,16	0/1:23,0:23:10.84:11,0,58	0/0:4,0:4:8.15:0,8,24	0/1:22,1:23:30.85:31,0,60	0/1:18,0:18:14.77:15,0,32	0/1:6,0:6:4.36:6,0,4	0/0:8,2:10:1.08:0,1,26	0/1:10,0:10:9.38:9,0,36	0/0:18,0:18:34.81:0,35,105	0/1:7,3:10:17.98:81,0,18
chr10	10011724	.	A	AGG	2294.97	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=10.602;DP=722;FS=7.854;HRun=0;HaplotypeScore=87.6270;InbreedingCoeff=0.9995;MQ=71.94;MQ0=1;MQRankSum=-1.481;QD=40.98;ReadPosRankSum=1.408;VQSLOD=5.4590;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:48:99:0,147,2314	0/0:12,0:12:36.12:0,36,570	0/0:15,0:13:33.02:0,33,479	0/0:14,0:15:29.99:0,30,441	1/1:2,29:33:84.27:1494,84,0	0/0:20,0:20:60.19:0,60,943	0/0:28,0:28:81.23:0,81,1241	0/0:21,0:21:60.20:0,60,934	0/0:22,0:22:66.21:0,66,1041	0/0:30,0:30:87.30:0,87,1398	0/0:24,0:24:66.22:0,66,1039	0/0:32,0:32:96.33:0,96,1540	0/0:33,0:33:99:0,99,1553	0/0:27,0:27:81.27:0,81,1288	0/0:27,0:27:81.26:0,81,1297	0/0:22,0:22:66.21:0,66,1001	0/0:28,0:28:84.27:0,84,1316	0/0:27,0:27:69.23:0,69,1091	0/0:16,0:16:48.15:0,48,715	0/0:26,0:26:75.26:0,75,1210	0/0:38,0:38:99:0,111,1651	0/0:21,0:21:60.19:0,60,933	0/0:26,0:26:75.24:0,75,1177	0/0:21,0:21:63.22:0,63,1028	1/1:1,22:22:48.16:923,48,0	0/0:35,0:35:99:0,105,1707	0/0:36,0:36:99:0,106,1630	0/0:15,0:15:45.15:0,45,717
chr10	10012711	.	GGTGTGTGT	G	1560.18	PASS	AC=26;AF=0.520;AN=50;BaseQRankSum=4.622;DP=576;FS=27.319;HRun=0;HaplotypeScore=139.7301;InbreedingCoeff=0.6574;MQ=63.24;MQ0=27;MQRankSum=-5.719;QD=5.61;ReadPosRankSum=-2.000;VQSLOD=0.8721;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:25,2:27:9.01:154,9,0	0/0:4,0:6:9.03:0,9,197	./.	0/0:58,0:31:0.89:0,1,2	1/1:16,0:15:6.02:110,6,0	1/1:12,4:15:6.02:148,6,0	1/1:33,2:34:4.71:146,5,0	0/0:22,0:20:3.01:0,3,44	1/1:17,1:19:5.35:129,5,0	0/0:9,0:9:6.02:0,6,152	1/1:8,0:8:0.47:1,0,0	1/1:13,4:17:15.05:289,15,0	1/1:20,2:24:11.66:259,12,0	1/1:18,4:23:9.03:170,9,0	0/0:13,0:13:9.48:0,9,165	0/0:14,0:16:21.02:0,21,369	0/0:29,0:31:21.07:0,21,458	0/0:13,0:17:22.85:0,23,330	1/1:18,0:20:5.91:72,6,0	0/0:3,0:5:6:0,6,70	0/0:22,0:33:10.92:0,11,91	1/1:8,3:9:2.95:74,3,0	./.	1/1:39,4:43:1.46:69,1,0	1/1:15,0:14:5.69:111,6,0	0/0:18,0:18:9.50:0,10,210	0/0:8,0:9:9.01:0,9,160	./.
chr10	10014578	.	GTC	G	4244.09	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=9.655;DP=771;FS=8.134;HRun=0;HaplotypeScore=116.0471;InbreedingCoeff=0.9530;MQ=60.45;MQ0=20;MQRankSum=0.842;QD=24.25;ReadPosRankSum=6.444;VQSLOD=5.4419;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,46:46:87.28:1119,87,0	0/0:9,0:9:24.07:0,24,376	0/0:68,0:15:18.42:0,18,258	0/0:84,0:24:26.83:0,27,309	0/0:2,0:27:3.01:0,3,35	0/0:25,0:24:63.18:0,63,1002	0/0:37,0:35:74.65:0,75,1172	0/0:36,0:33:72.20:0,72,1168	0/0:26,0:25:69.21:0,69,1145	0/0:27,0:26:72.22:0,72,1142	0/0:17,0:17:42.13:0,42,679	1/1:0,21:21:51.17:656,51,0	1/1:1,25:26:60.20:772,60,0	1/1:2,19:21:45.15:579,45,0	0/0:28,0:28:72.23:0,72,1174	0/0:19,0:19:45.15:0,45,753	0/0:17,0:17:45.08:0,45,665	0/0:8,0:8:15.05:0,15,246	0/0:19,0:19:45.15:0,45,743	0/0:23,0:23:60.20:0,60,992	0/0:44,0:43:96.31:0,96,1575	1/1:4,12:16:17.93:231,18,0	1/1:2,19:20:39.05:502,39,0	1/1:3,21:23:30.10:386,30,0	0/0:7,0:20:9.74:0,10,65	0/0:22,0:22:60.20:0,60,997	0/0:30,0:30:84.29:0,84,1386	0/0:8,0:8:21.07:0,21,345
chr10	10014655	.	CTG	C	86.56	PASS	AB=0.986;AC=7;AF=0.125;AN=56;BaseQRankSum=8.438;DP=704;FS=0.000;HRun=0;HaplotypeScore=188.3862;InbreedingCoeff=0.3280;MQ=42.22;MQ0=48;MQRankSum=-5.840;QD=1.15;ReadPosRankSum=-0.164;VQSLOD=1.9476;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,1:33:17.79:0,18,344	0/1:7,0:7:24.27:24,0,179	0/0:12,1:5:9.03:0,9,125	0/0:27,0:9:15.93:0,16,277	1/1:21,3:21:8.63:70,9,0	0/0:25,0:21:32.13:0,32,754	0/0:44,0:36:47.99:0,48,886	0/0:38,0:32:90.30:0,90,1582	0/0:21,0:19:32.99:0,33,615	0/0:37,0:35:35.81:0,36,1058	0/0:13,0:13:15.05:0,15,242	0/0:23,0:22:27.35:0,27,773	0/1:22,1:23:85.55:86,0,528	0/0:28,0:27:15.77:0,16,705	0/0:30,1:30:36.12:0,36,656	0/0:24,0:23:20.55:0,21,371	0/0:13,1:14:0.86:0,1,297	0/0:15,0:14:27.09:0,27,472	0/0:29,0:24:56.55:0,57,986	0/0:28,0:26:33.10:0,33,533	0/0:41,0:37:48.10:0,48,838	0/0:17,0:15:9.01:0,9,172	0/0:22,0:17:21.04:0,21,335	0/0:39,0:34:45.15:0,45,834	1/1:10,2:9:2.78:22,3,0	0/0:33,0:27:6.77:0,7,1006	0/0:32,0:32:39.11:0,39,668	0/1:9,0:9:8.18:8,0,303
chr10	10014665	.	GTCTCTCTCTCTCTCTCTC	G	5787.29	PASS	AB=0.837;AC=31;AF=0.620;AN=50;BaseQRankSum=1.660;DP=677;FS=11.902;HRun=0;HaplotypeScore=282.8633;InbreedingCoeff=0.2596;MQ=40.77;MQ0=58;MQRankSum=-0.039;QD=12.47;ReadPosRankSum=1.721;VQSLOD=1.8188;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:28,5:31:1.73:5,2,0	1/1:4,2:6:5.91:103,6,0	./.	./.	0/0:29,0:26:7.50:0,7,168	0/1:21,1:19:16.47:82,0,16	0/0:46,0:38:6.31:0,6,61	0/1:30,0:24:0.83:1,0,1	0/1:23,1:22:28.95:53,0,29	1/1:20,15:33:23.45:860,23,0	0/0:8,4:11:0.47:0,0,1	1/1:20,3:21:17.96:471,18,0	1/1:12,6:21:5.49:1048,5,0	1/1:20,5:24:24.74:523,25,0	0/0:15,17:33:3.10:0,3,14	1/1:8,15:23:6.91:245,7,0	1/1:13,0:14:6.02:189,6,0	0/1:7,8:15:56.78:218,0,57	1/1:23,0:25:17.39:269,17,0	1/1:12,14:24:8.92:169,9,0	0/0:39,0:35:0.47:0,0,1	0/1:14,4:17:0:0,0,0	./.	0/1:35,3:31:36.85:125,0,37	0/0:15,0:12:3.48:0,3,103	1/1:25,5:24:20.87:892,21,0	0/1:12,16:30:2.05:244,0,2	1/1:9,3:10:6.02:291,6,0
chr10	10014877	.	AG	A	1933.41	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.023;DP=741;FS=8.584;HRun=1;HaplotypeScore=72.7595;InbreedingCoeff=0.9998;MQ=84.33;MQ0=0;MQRankSum=-2.079;QD=33.33;ReadPosRankSum=1.599;VQSLOD=2.8474;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:96.31:0,96,1508	0/0:13,0:13:39.13:0,39,603	0/0:27,0:27:69.23:0,69,1064	0/0:24,0:24:69.20:0,69,1074	1/1:0,32:31:75.25:1048,75,0	0/0:27,0:27:78.27:0,78,1244	0/0:27,0:27:81.28:0,81,1287	0/0:30,0:30:87.30:0,87,1384	0/0:15,0:15:45.15:0,45,719	0/0:36,0:36:99:0,108,1691	0/0:34,0:34:99:0,99,1580	0/0:24,0:24:72.23:0,72,1125	0/0:24,0:24:63.19:0,63,961	0/0:28,0:28:84.29:0,84,1342	0/0:30,0:30:87.30:0,87,1390	0/0:24,0:24:72.23:0,72,1126	0/0:22,0:22:63.21:0,63,1007	0/0:25,0:25:75.26:0,75,1199	0/0:30,0:30:90.29:0,90,1382	0/0:34,0:34:99:0,102,1606	0/0:30,0:30:90.28:0,90,1392	0/0:29,0:29:84.29:0,84,1343	0/0:24,0:24:69.24:0,69,1096	0/0:30,0:30:87.30:0,87,1383	1/1:0,26:26:72.24:1007,72,0	0/0:31,0:31:93.31:0,93,1457	0/0:22,0:22:66.23:0,66,1054	0/0:11,0:11:33.11:0,33,527
chr10	10015619	.	C	CCTCT	8952.74	PASS	AB=0.869;AC=43;AF=0.768;AN=56;BaseQRankSum=-0.863;DP=751;FS=4.763;HRun=0;HaplotypeScore=135.1945;InbreedingCoeff=0.0733;MQ=63.86;MQ0=43;MQRankSum=0.432;QD=13.95;ReadPosRankSum=2.420;VQSLOD=4.4094;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:39,0:35:2.39:693,0,2	0/1:7,0:7:32.40:148,0,32	0/0:45,0:15:2.20:0,2,47	0/0:63,0:29:7.33:0,7,64	1/1:24,0:23:9.03:151,9,0	1/1:19,0:18:7.58:104,8,0	1/1:34,0:32:27.02:412,27,0	1/1:26,0:26:33.91:453,34,0	1/1:27,0:24:33.07:490,33,0	1/1:19,0:25:21.06:308,21,0	1/1:22,0:20:12.04:201,12,0	1/1:29,0:28:24.82:651,25,0	1/1:23,0:22:21.52:302,22,0	0/1:24,0:23:48.87:335,0,49	1/1:24,0:23:30.10:510,30,0	0/1:24,0:25:9.66:522,0,10	1/1:27,0:24:36.96:499,37,0	1/1:19,0:19:37.84:582,38,0	1/1:13,0:11:12.02:133,12,0	0/1:8,11:20:35.94:110,0,36	0/1:28,23:52:89.83:90,0,117	0/1:23,0:22:16.70:363,0,17	0/1:19,0:20:22.19:335,0,22	1/1:32,0:31:21.98:569,22,0	0/1:11,1:24:0:0,0,0	1/1:23,0:24:46.88:765,47,0	1/1:10,1:23:6.02:85,6,0	1/1:6,0:5:9.03:144,9,0
chr10	10018002	.	TA	T	15868.24	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=13.312;DP=612;FS=5.204;HRun=4;HaplotypeScore=157.3892;InbreedingCoeff=0.9968;MQ=89.92;MQ0=0;MQRankSum=-9.376;QD=30.93;ReadPosRankSum=4.913;VQSLOD=3.0411;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,41:43:99:1331,111,0	1/1:0,7:7:21.06:252,21,0	0/0:31,0:30:87.24:0,87,1125	0/0:29,0:29:51.83:0,52,848	0/0:16,0:16:48.16:0,48,670	1/1:0,26:26:75.23:899,75,0	1/1:3,20:23:57.17:683,57,0	1/1:5,24:29:72.14:810,72,0	1/1:0,20:20:57.14:668,57,0	1/1:4,14:18:39.12:461,39,0	1/1:3,9:12:27.08:323,27,0	1/1:1,20:21:60.18:715,60,0	1/1:2,18:20:54.17:647,54,0	1/1:3,22:25:66.19:779,66,0	1/1:0,19:19:57.13:667,57,0	1/1:1,20:21:54.17:647,54,0	1/1:0,28:28:69.21:827,69,0	1/1:2,25:27:75.23:899,75,0	1/1:1,8:9:24.07:287,24,0	1/1:3,16:19:42.09:487,42,0	1/1:1,36:37:99:1170,99,0	1/1:0,19:19:54.17:647,54,0	1/1:5,10:15:33.05:368,33,0	1/1:2,30:32:81.25:971,81,0	0/0:22,0:22:66.22:0,66,923	1/1:0,17:17:48.15:575,48,0	1/1:4,14:18:42.13:504,42,0	1/1:1,7:8:21.06:252,21,0
chr10	10018479	.	CTAG	C	1659.89	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.981;DP=786;FS=2.316;HRun=0;HaplotypeScore=107.6278;InbreedingCoeff=0.9837;MQ=54.48;MQ0=3;MQRankSum=3.191;QD=36.89;ReadPosRankSum=3.397;VQSLOD=4.6994;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,132,3046	0/0:9,0:9:27.09:0,27,638	0/0:31,0:12:33.09:0,33,745	0/0:41,0:31:90.30:0,90,2133	1/1:0,23:23:44.93:837,45,0	0/0:19,0:19:57.20:0,57,1371	0/0:29,0:29:87.30:0,87,2113	0/0:41,0:41:99:0,120,2898	0/0:28,0:28:81.26:0,81,1834	0/0:24,0:24:69.23:0,69,1612	0/0:22,0:22:63.22:0,63,1546	0/0:25,0:25:72.23:0,72,1675	0/0:30,0:30:84.23:0,84,2011	0/0:29,0:28:84.29:0,84,2069	0/0:28,0:28:84.29:0,84,2062	0/0:31,0:30:78.27:0,78,1904	0/0:46,0:46:99:0,135,3150	0/0:32,0:32:96.33:0,96,2247	0/0:25,0:21:63.22:0,63,1522	0/0:23,0:23:69.24:0,69,1685	0/0:44,0:44:99:0,129,3009	0/0:21,0:21:60.21:0,60,1465	0/0:18,0:18:51.18:0,51,1249	0/0:44,0:44:99:0,123,2907	1/1:0,22:22:51.17:944,51,0	0/0:27,0:27:78.26:0,78,1797	0/0:26,0:26:78.25:0,78,1852	0/0:4,0:4:12.04:0,12,296
chr10	10018590	.	ATCTCTCTC	A	1718.38	PASS	AB=1.000;AC=31;AF=0.705;AN=44;BaseQRankSum=2.086;DP=612;FS=7.099;HRun=0;HaplotypeScore=150.2913;InbreedingCoeff=0.3317;MQ=64.59;MQ0=18;MQRankSum=-2.086;QD=4.38;ReadPosRankSum=0.695;VQSLOD=2.3063;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:23:1.91:3,0,2	./.	1/1:36,0:25:2.37:8,2,0	./.	0/0:11,0:9:3.01:0,3,32	0/0:24,0:24:9.03:0,9,346	0/1:32,0:32:70.86:71,0,209	0/0:43,0:42:2.03:0,2,5	0/0:23,0:24:21.02:0,21,505	1/1:24,0:23:5.99:61,6,0	./.	1/1:9,0:12:2.84:14,3,0	1/1:15,0:16:6.02:112,6,0	1/1:22,0:25:6.02:111,6,0	1/1:20,5:26:15.05:350,15,0	1/1:15,0:18:2.90:16,3,0	1/1:17,0:17:3.01:75,3,0	0/1:9,0:8:6.71:7,0,83	1/1:23,0:20:6.01:104,6,0	./.	1/1:25,0:24:3.01:40,3,0	./.	1/1:10,0:10:3:26,3,0	1/1:29,7:36:9.02:157,9,0	./.	1/1:26,2:26:3.83:97,4,0	1/1:25,4:30:27.09:600,27,0	0/0:19,0:17:3.01:0,3,75
chr10	10018713	.	GTCTCTC	G	1384.76	PASS	AB=0.843;AC=29;AF=0.537;AN=54;BaseQRankSum=2.204;DP=558;FS=1.899;HRun=0;HaplotypeScore=140.8968;InbreedingCoeff=0.3501;MQ=55.40;MQ0=19;MQRankSum=-1.751;QD=4.23;ReadPosRankSum=1.969;VQSLOD=2.6956;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:24:1.60:17,2,0	1/1:3,4:7:3.01:60,3,0	./.	0/0:54,0:22:0:0,0,0	0/0:21,0:24:14.23:0,14,201	0/1:19,0:19:7.73:48,0,8	1/1:12,0:20:14.87:121,15,0	0/0:26,0:24:3.01:0,3,37	1/1:9,0:20:6.02:67,6,0	1/1:25,0:24:14.78:158,15,0	0/0:9,3:12:0:0,0,0	1/1:12,0:16:9.03:125,9,0	1/1:12,8:21:12.04:219,12,0	1/1:6,0:7:3.01:42,3,0	1/1:15,9:25:5.02:51,5,0	0/1:11,8:21:18.85:19,0,28	0/0:13,0:14:15.03:0,15,189	0/1:12,0:12:48.71:49,0,76	0/0:11,0:11:5.98:0,6,62	0/0:13,0:13:12.02:0,12,187	0/0:14,0:15:12.04:0,12,178	0/0:14,0:17:5.75:0,6,61	1/1:13,0:23:1.71:7,2,0	1/1:25,0:27:10.12:128,10,0	0/0:21,0:21:15.04:0,15,211	0/1:15,0:21:94.56:95,0,109	1/1:13,9:22:15.05:278,15,0	0/1:9,1:11:27.02:71,0,27
chr10	10019793	.	T	TG	2367.08	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=4.383;DP=790;FS=0.528;HRun=0;HaplotypeScore=96.2439;InbreedingCoeff=0.9999;MQ=85.02;MQ0=0;MQRankSum=-6.059;QD=35.33;ReadPosRankSum=1.486;VQSLOD=3.2654;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:56:99:0,166,2303	0/0:14,0:14:39.06:0,39,503	0/0:32,0:32:88.83:0,89,1190	0/0:20,0:20:57.09:0,57,753	1/1:2,26:28:57.19:909,57,0	0/0:24,0:24:72.23:0,72,990	0/0:35,0:35:99:0,102,1388	0/0:32,0:32:96.31:0,96,1327	0/0:23,0:23:66.21:0,66,905	0/0:30,0:30:87.28:0,87,1188	0/0:21,0:21:60.20:0,60,835	0/0:25,0:25:75.25:0,75,1048	0/0:34,0:34:99:0,102,1412	0/0:22,0:22:66.21:0,66,906	0/0:22,0:22:63.21:0,63,879	0/0:29,0:29:84.25:0,84,1139	0/0:31,0:31:93.30:0,93,1282	0/0:30,0:30:87.29:0,87,1217	0/0:22,0:22:66.22:0,66,918	0/0:36,0:36:99:0,102,1425	0/0:19,0:19:57.17:0,57,778	0/0:31,0:31:81.26:0,81,1111	0/0:30,0:30:78.24:0,78,1067	0/0:24,0:24:69.15:0,69,903	1/1:2,37:39:99:1580,99,0	0/0:41,0:41:99:0,123,1706	0/0:27,0:27:81.27:0,81,1132	0/0:13,0:13:39.13:0,39,545
chr10	10019823	.	TGCTGTGGTTGAATGAC	T	4266.93	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.900;DP=743;FS=2.159;HRun=0;HaplotypeScore=318.1423;InbreedingCoeff=0.9994;MQ=80.70;MQ0=0;MQRankSum=-8.818;QD=85.34;ReadPosRankSum=-0.583;VQSLOD=3.6291;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,138,9782	0/0:10,0:10:27.08:0,27,1556	0/0:23,0:23:66.07:0,66,3322	0/0:18,0:18:54.18:0,54,2961	1/1:4,14:18:39.08:1397,39,0	0/0:26,0:26:78.27:0,78,5783	0/0:32,0:32:93.32:0,93,6943	0/0:25,0:25:72.24:0,72,4861	0/0:23,0:23:66.23:0,66,4919	0/0:25,0:25:72.24:0,72,5101	0/0:14,0:14:36.12:0,36,2506	0/0:25,0:25:75.24:0,75,5101	0/0:32,0:32:96.33:0,96,7031	0/0:20,0:20:60.21:0,60,4596	0/0:22,0:22:63.22:0,63,4833	0/0:30,0:30:90.31:0,90,6677	0/0:32,0:32:93.30:0,93,6466	0/0:30,0:30:87.26:0,87,6677	0/0:21,0:21:60.20:0,60,4032	0/0:37,0:37:99:0,105,6880	0/0:21,0:21:60.18:0,60,3792	0/0:37,0:37:99:0,102,7485	0/0:24,0:24:63.22:0,63,4362	0/0:24,0:24:72.21:0,72,5199	1/1:11,21:32:69.21:2870,69,0	0/0:46,0:46:99:0,138,10678	0/0:31,0:31:93.32:0,93,7193	0/0:16,0:15:48.16:0,48,3595
chr10	10020087	.	ACT	A	7111.81	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-4.056;DP=498;FS=12.342;HRun=0;HaplotypeScore=81.1222;InbreedingCoeff=0.7755;MQ=71.79;MQ0=3;MQRankSum=-0.964;QD=17.65;ReadPosRankSum=4.400;VQSLOD=4.1881;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:29,8:32:44.63:464,45,0	1/1:2,3:4:6.02:73,6,0	0/0:26,0:14:12.35:0,12,199	0/0:35,0:25:28.88:0,29,268	0/0:17,0:17:3:0,3,25	1/1:11,5:16:13.95:278,14,0	1/1:17,1:17:27.07:314,27,0	1/1:10,20:29:64.79:686,65,0	1/1:7,4:11:24.07:290,24,0	1/1:8,2:10:17.79:194,18,0	1/1:7,2:9:18.01:202,18,0	1/1:6,10:16:12.04:143,12,0	1/1:9,6:14:18.38:354,18,0	1/1:6,2:8:15.04:181,15,0	1/1:20,9:29:37.51:542,38,0	1/1:4,12:16:23.95:290,24,0	1/1:5,12:17:18.94:220,19,0	1/1:5,4:9:6.02:73,6,0	1/1:15,3:17:24.07:289,24,0	1/1:10,8:18:41.84:460,42,0	1/1:18,5:19:21.02:218,21,0	1/1:9,7:13:27.08:320,27,0	1/1:10,7:17:38.51:400,39,0	1/1:21,7:26:22.85:337,23,0	0/0:17,0:17:4.82:0,5,28	1/1:9,5:14:36.11:435,36,0	1/1:11,5:16:27.07:316,27,0	1/1:2,5:7:3.01:31,3,0
chr10	10020111	.	CCTCTCTCTCT	C	741.35	PASS	AB=0.981;AC=24;AF=0.600;AN=40;BaseQRankSum=-0.058;DP=489;FS=23.335;HRun=0;HaplotypeScore=148.6523;InbreedingCoeff=0.1481;MQ=51.20;MQ0=27;MQRankSum=-0.634;QD=3.05;ReadPosRankSum=3.609;VQSLOD=0.9528;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,2:30:3.45:0,3,23	0/1:6,0:5:9.05:14,0,9	./.	./.	./.	0/0:16,0:15:1.36:0,1,3	0/1:10,0:9:0.06:0,0,0	./.	1/1:16,0:16:3.44:123,3,0	1/1:14,0:14:5.94:42,6,0	./.	1/1:17,0:16:2.12:67,2,0	1/1:14,2:18:13.99:190,14,0	1/1:10,1:11:1.74:87,2,0	0/0:28,0:28:1.35:0,1,2	1/1:16,0:16:6.58:36,7,0	0/0:18,0:15:2.94:0,3,18	1/1:9,0:7:4.90:14,5,0	0/1:16,0:16:35.85:64,0,36	0/1:13,0:13:0:0,0,0	./.	./.	1/1:16,1:19:5.99:63,6,0	1/1:34,0:30:2.22:15,2,0	0/0:14,0:14:3.95:0,4,125	0/1:23,0:22:31.11:78,0,31	0/1:15,0:14:2.63:61,0,3	./.
chr10	10020178	.	A	ATG	8534.26	PASS	AB=0.609;AC=42;AF=0.750;AN=56;BaseQRankSum=-5.523;DP=695;FS=6.817;HRun=0;HaplotypeScore=96.3664;InbreedingCoeff=0.3374;MQ=47.37;MQ0=69;MQRankSum=2.315;QD=15.05;ReadPosRankSum=3.151;VQSLOD=4.5417;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:14,28:31:18.41:416,18,0	0/1:3,3:6:30.21:30,0,31	0/0:47,0:10:18.05:0,18,211	0/0:41,0:14:20.65:0,21,179	0/0:16,0:16:7.14:0,7,207	0/1:9,17:23:15.07:273,0,15	0/1:8,18:25:37.99:428,0,38	1/1:13,15:30:11.18:617,11,0	1/1:9,20:29:27:437,27,0	1/1:7,15:20:39.13:616,39,0	1/1:7,9:13:11.71:158,12,0	0/1:8,13:18:16.35:272,0,16	1/1:7,13:20:18.06:287,18,0	1/1:2,12:11:9.03:147,9,0	1/1:8,18:25:20.84:342,21,0	1/1:3,19:19:29.53:476,30,0	1/1:8,12:15:12.04:183,12,0	1/1:4,6:7:6.02:98,6,0	0/1:6,8:15:17.34:196,0,17	1/1:6,25:30:10.45:655,10,0	1/1:10,26:25:2.10:550,2,0	1/1:9,18:26:24.57:547,25,0	1/1:9,16:22:11.55:196,12,0	1/1:12,26:33:18.63:339,19,0	0/0:23,0:23:54.16:0,54,652	1/1:9,19:27:48.08:740,48,0	0/1:8,17:24:46.61:290,0,47	1/1:0,6:6:15.05:245,15,0
chr10	10020504	.	GCAATTC	G	1903.20	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.697;DP=697;FS=20.372;HRun=0;HaplotypeScore=140.6062;InbreedingCoeff=0.9989;MQ=91.79;MQ0=0;MQRankSum=-8.737;QD=50.08;ReadPosRankSum=-0.874;VQSLOD=2.2495;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:78.22:0,78,2573	0/0:14,0:14:42.13:0,42,1367	0/0:32,0:32:87.30:0,87,2753	0/0:25,0:26:69.24:0,69,2034	1/1:0,23:23:54.17:1151,54,0	0/0:26,0:25:75.24:0,75,2569	0/0:22,0:22:66.21:0,66,2158	0/0:28,0:28:63.22:0,63,2177	0/0:20,0:20:60.21:0,60,1933	0/0:33,0:33:99:0,99,3151	0/0:27,0:27:75.26:0,75,2530	0/0:17,0:17:51.18:0,51,1694	0/0:25,0:25:69.24:0,69,2331	0/0:23,0:23:69.24:0,69,2381	0/0:33,0:33:96.33:0,96,3109	0/0:39,0:39:99:0,108,3759	0/0:19,0:19:54.16:0,54,1768	0/0:14,0:14:42.14:0,42,1405	0/0:24,0:24:69.24:0,69,2430	0/0:31,0:31:87.30:0,87,2944	0/0:32,0:32:90.31:0,90,3035	0/0:25,0:25:66.23:0,66,2255	0/0:27,0:27:75.26:0,75,2540	0/0:24,0:24:72.25:0,72,2545	1/1:0,15:15:39.13:874,39,0	0/0:41,0:41:99:0,120,4098	0/0:20,0:20:51.17:0,51,1746	0/0:8,0:8:24.08:0,24,848
chr10	10021200	.	GT	G	7961.72	PASS	AB=0.859;AC=47;AF=0.839;AN=56;BaseQRankSum=4.675;DP=564;FS=2.218;HRun=11;HaplotypeScore=72.1529;InbreedingCoeff=0.6564;MQ=83.75;MQ0=1;MQRankSum=-0.945;QD=15.61;ReadPosRankSum=3.625;VQSLOD=5.6770;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,30:32:69.01:650,69,0	1/1:1,9:10:26.97:222,27,0	0/1:39,0:28:1.96:2,0,247	0/1:28,0:24:15.28:15,0,91	1/1:2,20:22:47.87:394,48,0	0/0:27,1:28:49.83:0,50,690	0/0:11,0:11:33.08:0,33,351	1/1:7,13:20:38.08:308,38,0	0/0:15,0:15:42.08:0,42,432	1/1:2,12:14:35.94:293,36,0	1/1:1,23:24:60.81:514,61,0	1/1:0,14:14:29.97:247,30,0	1/1:2,17:19:41.95:345,42,0	1/1:5,9:14:23.96:197,24,0	1/1:2,13:15:35.96:296,36,0	1/1:2,17:19:15.86:337,16,0	1/1:2,20:22:53.93:443,54,0	0/1:9,25:34:32.63:374,0,33	1/1:5,8:13:26.94:217,27,0	1/1:2,22:27:68.20:511,68,0	1/1:1,6:7:14.98:123,15,0	1/1:0,20:21:43.91:344,44,0	1/1:5,20:25:53.61:443,54,0	1/1:1,9:10:17.98:148,18,0	1/1:2,18:21:46.96:375,47,0	1/1:1,18:19:53.31:426,53,0	1/1:5,28:33:77.90:640,78,0	1/1:3,4:7:11.98:99,12,0
chr10	10022435	.	T	TAA	1074.64	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-0.613;DP=572;FS=4.474;HRun=10;HaplotypeScore=78.2554;InbreedingCoeff=0.9809;MQ=72.38;MQ0=0;MQRankSum=-3.021;QD=24.99;ReadPosRankSum=-1.014;VQSLOD=3.3821;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,105,1060	0/0:8,0:8:21.02:0,21,206	0/0:11,0:11:20.82:0,21,193	0/0:11,0:12:17.67:0,18,179	1/1:5,17:22:51.05:680,51,0	0/0:21,0:20:60.10:0,60,595	0/0:32,0:33:77.87:0,78,774	0/0:30,0:32:83.89:0,84,831	0/0:20,0:20:42.04:0,42,419	0/0:17,0:17:45.05:0,45,446	0/0:31,0:33:86.59:0,87,834	0/0:13,0:13:39.07:0,39,390	0/0:22,0:22:63.12:0,63,641	0/0:10,0:10:27.06:0,27,275	0/0:15,0:15:26.90:0,27,274	0/0:13,0:13:36.06:0,36,359	0/0:22,0:23:51.07:0,51,519	0/0:18,0:18:51.11:0,51,519	0/0:26,0:26:56.59:0,57,529	0/0:33,0:33:78.11:0,78,793	0/0:18,0:18:39.03:0,39,390	0/0:22,0:23:56.85:0,57,561	0/0:17,0:17:39.02:0,39,377	0/0:22,0:22:48.02:0,48,488	1/1:3,16:21:41.51:516,42,0	0/0:15,0:14:23.94:0,24,231	0/0:32,0:32:71.85:0,72,690	0/0:6,0:6:15.01:0,15,153
chr10	10024733	.	TC	T	1510.42	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.882;DP=789;FS=3.400;HRun=5;HaplotypeScore=76.5687;InbreedingCoeff=0.9755;MQ=87.95;MQ0=0;MQRankSum=-0.328;QD=27.46;ReadPosRankSum=1.258;VQSLOD=3.9448;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,132,1737	0/0:12,0:12:33.11:0,33,451	0/0:28,0:28:72.13:0,72,936	0/0:29,0:29:81.17:0,81,1033	1/1:2,35:37:99:1122,99,0	0/0:20,0:20:51.17:0,51,695	0/0:22,0:22:63.21:0,63,861	0/0:25,0:25:69.23:0,69,943	0/0:23,0:23:69.23:0,69,943	0/0:30,0:29:87.28:0,87,1163	0/0:21,0:21:63.20:0,63,845	0/0:30,0:30:90.26:0,90,1183	0/0:23,0:23:69.22:0,69,927	0/0:34,0:34:96.32:0,96,1312	0/0:47,0:47:99:0,138,1853	0/0:31,0:31:90.27:0,90,1186	0/0:21,0:21:54.18:0,54,734	0/0:21,0:21:63.14:0,63,819	0/0:26,0:26:63.21:0,63,859	0/0:28,0:28:72.24:0,72,984	0/0:57,0:57:99:0,159,2147	0/0:26,0:26:72.24:0,72,984	0/0:27,0:27:75.25:0,75,1023	0/0:23,0:23:66.21:0,66,885	1/1:2,16:18:10.13:503,10,0	0/0:40,0:40:99:0,117,1572	0/0:28,0:28:78.22:0,78,1046	0/0:13,0:13:39.13:0,39,530
chr10	10025368	.	TACACACACAC	T	5026.44	PASS	AB=0.826;AC=37;AF=0.685;AN=54;BaseQRankSum=4.238;DP=596;FS=14.407;HRun=0;HaplotypeScore=177.5948;InbreedingCoeff=0.2244;MQ=66.35;MQ0=5;MQRankSum=-5.539;QD=11.85;ReadPosRankSum=1.730;VQSLOD=2.6985;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:35,5:42:12.10:399,12,0	1/1:6,1:8:6.02:159,6,0	./.	0/0:35,0:24:6.02:0,6,86	1/1:13,0:19:3.01:47,3,0	0/0:13,0:15:15.05:0,15,491	0/0:22,0:26:15.04:0,15,346	0/1:23,0:24:4.55:5,0,94	0/0:17,0:23:24.08:0,24,624	1/1:12,0:14:6.02:140,6,0	1/1:8,5:13:9.03:267,9,0	0/1:14,5:22:47.62:475,0,48	0/1:13,6:19:8.93:341,0,9	1/1:10,8:19:21.07:596,21,0	1/1:16,6:23:15.05:426,15,0	1/1:13,5:19:12.04:328,12,0	1/1:13,3:16:2.73:88,3,0	0/1:12,2:13:72.28:83,0,72	0/1:15,0:17:19.26:46,0,19	0/1:15,2:17:31.46:102,0,31	0/0:28,0:39:14.02:0,14,203	1/1:18,8:26:1.70:77,2,0	1/1:11,3:14:9.03:216,9,0	1/1:25,6:31:5.72:178,6,0	1/1:11,0:11:6.02:140,6,0	1/1:20,2:23:6.34:179,6,0	1/1:15,6:23:3.56:564,4,0	0/1:4,3:7:97.65:169,0,98
chr10	10025812	.	G	GACACAC	5430	PASS	AB=0.907;AC=45;AF=0.865;AN=52;BaseQRankSum=-5.714;DP=615;FS=1.782;HRun=0;HaplotypeScore=146.8954;InbreedingCoeff=0.3314;MQ=57.21;MQ0=8;MQRankSum=-1.116;QD=10.61;ReadPosRankSum=0.100;VQSLOD=3.3527;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:37,2:43:39.49:472,39,0	1/1:7,0:8:6.01:64,6,0	./.	./.	1/1:10,0:10:5.99:48,6,0	0/1:9,0:19:4.89:5,0,183	0/0:22,0:32:13.57:0,14,211	1/1:18,0:18:17.86:189,18,0	0/0:12,0:27:23.81:0,24,358	1/1:15,0:14:6.02:151,6,0	1/1:16,1:22:4.79:131,5,0	1/1:9,8:19:5.17:193,5,0	1/1:17,9:28:21.07:559,21,0	1/1:9,5:21:12.04:270,12,0	1/1:9,9:21:12.04:329,12,0	1/1:5,0:12:3.01:38,3,0	1/1:8,10:23:7.88:281,8,0	1/1:18,0:18:33.04:640,33,0	1/1:18,0:18:18.78:194,19,0	1/1:17,0:16:14.99:161,15,0	0/1:33,0:52:33.15:33,0,55	1/1:15,0:17:8.54:102,9,0	1/1:18,0:18:5.51:67,6,0	1/1:12,16:34:12.03:329,12,0	0/1:22,0:20:11.97:12,0,32	1/1:14,6:24:30.86:442,31,0	1/1:14,6:21:1.02:420,1,0	1/1:3,1:6:18.03:298,18,0
chr10	10025847	.	ACGCACACACG	A	453.23	PASS	AB=0.981;AC=7;AF=0.125;AN=56;BaseQRankSum=0.673;DP=669;FS=17.575;HRun=0;HaplotypeScore=182.4354;InbreedingCoeff=0.4464;MQ=55.23;MQ0=9;MQRankSum=0.874;QD=5.67;ReadPosRankSum=-5.374;VQSLOD=-0.6831;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:56:8.53:0,9,2431	0/1:7,0:7:9.97:10,0,342	0/0:22,0:8:23.82:0,24,396	0/0:31,0:18:20:0,20,462	1/1:17,0:17:33.08:452,33,0	0/0:23,0:22:25.22:0,25,1388	0/0:25,0:25:59.78:0,60,1462	0/0:31,0:30:3.38:0,3,1567	0/0:23,0:23:51.17:0,51,1579	0/0:19,0:18:48.11:0,48,1082	0/0:17,0:17:20.91:0,21,631	0/0:17,0:17:24.84:0,25,716	0/0:27,0:27:51.09:0,51,1385	0/0:28,0:27:51.16:0,51,1379	0/0:16,0:16:20.94:0,21,688	0/0:13,0:14:30.09:0,30,553	0/0:24,0:24:37.37:0,37,1103	0/0:19,0:22:57.03:0,57,1540	0/1:16,0:16:3:3,0,933	0/1:18,0:18:17.78:18,0,781	0/0:57,0:56:68.68:0,69,1856	0/0:21,0:21:8.97:0,9,764	0/0:24,0:25:18.17:0,18,969	0/0:33,0:33:34.88:0,35,1004	1/1:2,18:19:5.95:98,6,0	0/0:25,0:25:19.97:0,20,1906	0/0:21,0:20:28.89:0,29,1242	0/0:9,0:9:23.95:0,24,732
chr10	10027895	.	T	TCACA	4970.75	PASS	AB=0.720;AC=39;AF=0.750;AN=52;BaseQRankSum=-3.094;DP=639;FS=0.744;HRun=0;HaplotypeScore=150.6743;InbreedingCoeff=0.0640;MQ=66.44;MQ0=3;MQRankSum=3.296;QD=9.33;ReadPosRankSum=-1.750;VQSLOD=3.7680;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:36:35.84:36,0,105	1/1:3,1:6:8.97:97,9,0	./.	./.	0/0:23,0:23:12.01:0,12,112	1/1:23,1:23:15:210,15,0	1/1:14,7:21:6.02:142,6,0	1/1:22,0:22:13.38:195,13,0	1/1:10,2:17:12.04:240,12,0	0/1:14,2:20:2.50:295,0,3	1/1:10,0:10:2.99:23,3,0	1/1:6,0:15:8.23:37,8,0	0/1:15,0:24:3.15:70,0,3	0/1:19,0:26:90.99:91,0,158	1/1:17,12:37:28.92:582,29,0	1/1:9,6:20:20.75:322,21,0	1/1:12,4:24:28.77:409,29,0	0/1:5,9:20:4.15:415,0,4	1/1:14,0:13:23.78:417,24,0	1/1:19,7:30:5.57:83,6,0	0/1:25,2:27:5.74:326,0,6	0/1:9,0:25:50.88:51,0,52	1/1:7,0:16:13.85:64,14,0	0/1:21,0:48:46.83:159,0,47	0/0:19,0:19:26.35:0,26,250	1/1:17,3:24:21:319,21,0	1/1:9,5:16:12.04:255,12,0	0/1:5,3:9:38.11:133,0,38
chr10	10027919	.	ACACACACACACACCCC	A	2341.73	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=4.124;DP=666;FS=0.822;HRun=0;HaplotypeScore=254.3206;InbreedingCoeff=0.9838;MQ=56.40;MQ0=8;MQRankSum=-3.707;QD=53.22;ReadPosRankSum=1.699;VQSLOD=2.7441;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:73.13:0,73,3526	0/0:8,0:8:19.62:0,20,894	0/0:29,0:17:51:0,51,1427	0/0:31,0:19:54.05:0,54,1735	1/1:0,21:21:21.07:730,21,0	0/0:24,0:23:58.07:0,58,2043	0/0:19,0:18:36.10:0,36,1377	0/0:23,0:23:68.50:0,69,2392	0/0:19,0:19:26.77:0,27,1290	0/0:24,0:25:73.72:0,74,3313	0/0:7,0:7:15.05:0,15,544	0/0:18,0:18:32.60:0,33,1553	0/0:25,0:25:58.13:0,58,2867	0/0:22,0:22:66.01:0,66,4166	0/0:33,0:33:56.36:0,56,2824	0/0:19,0:18:35.91:0,36,2362	0/0:22,0:21:48.06:0,48,2871	0/0:21,0:21:41.94:0,42,2136	0/0:22,0:21:62.43:0,62,2607	0/0:23,0:23:32.03:0,32,1080	0/0:38,0:37:76.48:0,76,3252	0/0:32,0:32:60.20:0,60,2999	0/0:25,0:25:57.45:0,57,2756	0/0:45,0:45:88.17:0,88,5441	1/1:12,11:23:45.15:1732,45,0	0/0:24,0:24:69.24:0,69,3441	0/0:18,0:17:36.59:0,37,1961	0/0:10,0:9:21.07:0,21,1386
chr10	10028432	.	A	AT	1170.40	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-5.620;DP=588;FS=2.619;HRun=9;HaplotypeScore=60.8231;InbreedingCoeff=0.8729;MQ=76.73;MQ0=0;MQRankSum=-0.198;QD=21.28;ReadPosRankSum=-1.044;VQSLOD=4.0777;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:50.97:0,51,443	0/0:16,0:16:47.97:0,48,411	0/0:23,0:20:12.62:0,13,153	0/0:14,0:14:0.77:0,1,113	1/1:6,24:31:51.89:747,52,0	0/0:24,0:24:66.46:0,66,574	0/0:16,0:16:38.97:0,39,338	0/0:23,0:23:53.95:0,54,465	0/0:23,0:23:59.97:0,60,521	0/0:29,0:30:74:0,74,631	0/0:31,0:31:83.97:0,84,729	0/0:15,0:15:35.99:0,36,312	0/0:20,0:20:56.96:0,57,491	0/0:14,0:14:32.98:0,33,286	0/0:20,0:20:53.98:0,54,469	0/0:24,1:25:26.94:0,27,498	0/0:22,0:22:54.38:0,54,490	0/0:17,0:17:35.88:0,36,312	0/0:16,0:16:29.99:0,30,260	0/0:17,0:17:41.99:0,42,365	0/0:19,0:19:53.96:0,54,463	0/0:14,0:14:38.99:0,39,339	0/0:19,0:19:50.99:0,51,443	0/0:27,0:26:77.98:0,78,677	1/1:4,20:24:30.13:544,30,0	0/0:32,0:32:86.97:0,87,755	0/0:26,0:27:67.97:0,68,571	0/0:8,0:8:17.99:0,18,156
chr10	10028541	.	GAGATAGAT	G	1011.71	PASS	AB=0.912;AC=20;AF=0.476;AN=42;BaseQRankSum=1.378;DP=428;FS=5.189;HRun=0;HaplotypeScore=112.2135;InbreedingCoeff=0.5539;MQ=70.37;MQ0=11;MQRankSum=-2.093;QD=5.92;ReadPosRankSum=0.736;VQSLOD=2.0068;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:22:18.03:0,18,348	0/0:6,0:7:3.01:0,3,120	./.	./.	1/1:7,7:14:11.99:140,12,0	1/1:18,10:29:24.08:454,24,0	0/1:17,0:17:0:0,0,0	./.	1/1:8,1:9:3.01:72,3,0	1/1:8,0:8:6.02:92,6,0	1/1:13,0:19:3.48:39,3,0	0/0:9,0:9:3.48:0,3,96	0/0:14,0:13:12.04:0,12,410	0/0:14,0:14:6.02:0,6,89	1/1:21,0:21:12.51:199,13,0	1/1:12,0:12:2.50:9,2,0	./.	1/1:17,0:16:3.01:43,3,0	./.	0/1:11,1:14:57.19:63,0,57	0/0:10,0:12:8.98:0,9,72	0/0:14,0:17:14.08:0,14,418	0/0:14,0:17:15.01:0,15,282	0/0:12,0:16:12.04:0,12,420	0/0:7,0:9:5.99:0,6,48	./.	1/1:11,0:11:3.01:50,3,0	./.
chr10	10034731	.	G	GGGTACATAAAGTCCTC	29254.22	PASS	AB=0.700;AC=52;AF=0.963;AN=54;BaseQRankSum=-0.747;DP=280;FS=18.043;HRun=0;HaplotypeScore=275.8111;InbreedingCoeff=-0.0450;MQ=65.17;MQ0=0;MQRankSum=-2.334;QD=104.48;ReadPosRankSum=1.592;VQSLOD=3.4958;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:17:39.12:1780,39,0	1/1:3,0:3:9.03:405,9,0	0/1:2,0:6:10.58:863,0,11	0/1:6,1:8:6.50:853,0,7	1/1:9,0:9:8.82:287,9,0	1/1:8,0:8:21.07:1163,21,0	1/1:8,0:8:21.07:1161,21,0	1/1:17,0:17:51.15:2588,51,0	1/1:13,0:13:24.04:1027,24,0	1/1:7,0:7:15.04:832,15,0	1/1:8,0:8:15.05:725,15,0	1/1:15,0:15:36.08:1652,36,0	1/1:8,0:8:17.98:410,18,0	1/1:11,0:11:23.58:886,24,0	1/1:13,0:13:27.06:1083,27,0	1/1:14,0:14:30.10:1607,30,0	1/1:10,0:10:12.03:577,12,0	1/1:7,0:7:21.07:1337,21,0	1/1:4,0:4:12.04:374,12,0	1/1:8,0:8:12.51:583,13,0	1/1:11,0:11:27.07:1031,27,0	1/1:8,0:8:17.50:610,18,0	1/1:11,0:11:27.09:1208,27,0	1/1:10,0:10:12:429,12,0	1/1:15,0:15:41.54:2034,42,0	1/1:17,0:17:38.62:1786,39,0	1/1:14,0:14:39.13:1964,39,0	./.
chr10	10042380	.	CAT	C	1350.57	PASS	AB=0.809;AC=13;AF=0.232;AN=56;BaseQRankSum=1.353;DP=577;FS=7.166;HRun=0;HaplotypeScore=291.2601;InbreedingCoeff=-0.2753;MQ=41.14;MQ0=17;MQRankSum=-7.143;QD=4.72;ReadPosRankSum=-5.288;VQSLOD=1.1731;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:13,4:17:2.90:0,3,35	0/0:10,6:16:4.52:0,5,102	0/0:8,0:3:6.02:0,6,86	0/0:9,0:5:10.59:0,11,155	0/1:28,8:36:4.18:4,0,45	0/1:8,8:16:45.56:79,0,46	0/1:11,1:12:0:0,0,0	0/1:20,8:22:99:347,0,147	0/1:13,6:18:70.03:70,0,99	0/1:34,7:41:99:225,0,390	0/0:22,11:32:28.15:0,28,215	0/0:24,6:30:29.33:0,29,204	0/1:19,8:27:55.06:55,0,131	0/0:18,4:22:5.85:0,6,34	0/0:17,8:25:23.25:0,23,155	0/1:17,5:21:27.77:28,0,68	0/1:13,1:13:8.59:9,0,10	0/0:10,1:10:17.72:0,18,152	0/1:10,0:10:67.59:110,0,68	0/0:24,10:34:36.34:0,36,236	0/0:8,0:8:8.77:0,9,52	0/1:10,8:18:22.47:22,0,97	0/0:11,15:25:14.36:0,14,98	0/0:13,2:14:0.73:0,1,108	0/0:25,5:30:11.80:0,12,77	0/1:16,7:23:99:308,0,140	0/1:13,7:18:68.46:235,0,68	0/0:3,4:7:8.77:0,9,52
chr10	10042382	.	T	TAC	10812.18	PASS	AB=0.594;AC=49;AF=0.875;AN=56;BaseQRankSum=-1.238;DP=596;FS=1.364;HRun=0;HaplotypeScore=278.1885;InbreedingCoeff=0.4815;MQ=41.44;MQ0=17;MQRankSum=-0.516;QD=18.67;ReadPosRankSum=3.830;VQSLOD=4.7317;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:5,10:15:0:0,0,0	1/1:6,10:16:24.08:439,24,0	0/0:8,0:3:2.20:0,2,80	0/0:8,0:4:4.57:0,5,83	1/1:13,1:37:9.62:139,10,0	1/1:13,1:19:11.97:142,12,0	0/1:3,1:12:0.01:0,0,0	1/1:25,1:20:54.08:696,54,0	1/1:10,4:19:1.64:111,2,0	1/1:10,32:42:99:1871,111,0	1/1:13,19:31:36.11:655,36,0	1/1:12,19:31:36.03:608,36,0	1/1:11,16:27:33.11:584,33,0	1/1:5,17:22:6.02:109,6,0	1/1:10,17:27:20.83:345,21,0	1/1:5,16:20:18.06:320,18,0	1/1:1,12:12:9.03:145,9,0	0/1:4,7:10:5.89:205,0,6	1/1:5,8:13:28.25:448,28,0	1/1:17,22:39:36.11:658,36,0	1/1:0,8:8:9.03:165,9,0	1/1:9,10:19:19.94:382,20,0	1/1:18,10:27:21.07:384,21,0	1/1:5,11:15:21.49:350,21,0	1/1:8,0:32:12.02:125,12,0	1/1:9,15:24:66.23:1112,66,0	1/1:7,13:18:39.13:656,39,0	1/1:6,3:9:9.03:165,9,0
chr10	10042415	.	CG	C	7587.85	PASS	AB=0.655;AC=50;AF=0.893;AN=56;BaseQRankSum=-3.905;DP=531;FS=0.000;HRun=1;HaplotypeScore=300.2409;InbreedingCoeff=0.1707;MQ=40.57;MQ0=3;MQRankSum=-2.379;QD=14.54;ReadPosRankSum=2.612;VQSLOD=4.2749;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:0,13:13:0.14:0,0,0	1/1:0,16:16:15.05:209,15,0	0/1:9,4:9:94.35:155,0,94	0/1:8,2:7:56.56:57,0,69	1/1:0,34:35:6.47:160,6,0	1/1:0,29:28:18.06:246,18,0	0/0:0,9:9:0.47:0,0,1	1/1:2,24:26:78.25:1061,78,0	1/1:0,20:20:1.23:114,1,0	1/1:0,28:28:84.28:1165,84,0	1/1:0,32:32:20.97:292,21,0	1/1:0,22:22:21.04:293,21,0	1/1:1,22:23:30.08:401,30,0	1/1:1,13:14:6:84,6,0	1/1:1,25:26:9.49:126,9,0	1/1:0,19:19:15.05:209,15,0	1/1:0,5:5:3.01:42,3,0	1/1:1,1:2:5.99:64,6,0	1/1:0,7:7:21.07:293,21,0	1/1:1,40:41:24.07:311,24,0	1/1:0,2:2:3.01:42,3,0	1/1:2,13:15:15.02:175,15,0	1/1:0,34:34:8.82:125,9,0	0/1:0,7:7:0:1,0,0	1/1:0,25:25:12.04:167,12,0	1/1:0,21:21:63.21:879,63,0	1/1:0,26:26:45.15:623,45,0	1/1:0,9:9:21.07:293,21,0
chr10	10042495	.	CA	C	3802.56	PASS	AB=1.000;AC=53;AF=0.946;AN=56;BaseQRankSum=3.762;DP=426;FS=1.726;HRun=2;HaplotypeScore=400.3064;InbreedingCoeff=0.4526;MQ=31.68;MQ0=0;MQRankSum=-0.152;QD=9.01;ReadPosRankSum=2.457;VQSLOD=1.3893;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:14:17.54:102,18,0	1/1:8,0:8:11.76:72,12,0	0/0:4,0:4:8.15:0,8,76	0/1:7,0:5:8.23:8,0,33	1/1:14,1:15:11.57:68,12,0	1/1:19,0:18:20.50:128,20,0	1/1:8,0:8:12.75:60,13,0	1/1:16,0:16:22.45:111,22,0	1/1:22,0:22:37.93:219,38,0	1/1:28,1:29:76.23:435,76,0	1/1:17,1:18:23.37:137,23,0	1/1:12,2:14:19.12:117,19,0	1/1:14,0:14:15.48:97,15,0	1/1:18,0:18:22.71:129,23,0	1/1:20,0:20:35.18:214,35,0	1/1:26,0:26:38.11:228,38,0	1/1:3,0:3:5.85:33,6,0	1/1:6,0:6:17.06:91,17,0	1/1:13,0:13:26.11:152,26,0	1/1:30,0:30:52.65:308,53,0	1/1:6,0:6:2.90:17,3,0	1/1:12,0:12:20.42:118,20,0	1/1:20,2:22:29.21:170,29,0	1/1:8,0:8:5.80:32,6,0	1/1:27,0:26:31.37:181,31,0	1/1:19,0:19:49.36:266,49,0	1/1:22,1:23:42.26:235,42,0	1/1:5,0:5:13.67:73,14,0
chr10	10042498	.	CA	C	3742.29	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=4.247;DP=375;FS=3.427;HRun=2;HaplotypeScore=373.3141;InbreedingCoeff=0.7392;MQ=29.15;MQ0=0;MQRankSum=-0.248;QD=10.28;ReadPosRankSum=4.076;VQSLOD=2.1234;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:11,1:12:17.54:102,18,0	1/1:6,0:6:11.75:72,12,0	0/0:5,0:5:14.90:0,15,134	0/0:6,0:4:11.15:0,11,85	1/1:10,1:11:11.57:67,12,0	1/1:13,0:12:19.99:110,20,0	1/1:7,0:7:12.44:60,12,0	1/1:9,1:10:22.45:111,22,0	1/1:19,1:20:37.93:219,38,0	1/1:25,2:27:76.13:434,76,0	1/1:15,1:16:23.37:137,23,0	1/1:11,2:13:19.12:117,19,0	1/1:11,1:12:15.48:97,15,0	1/1:17,0:17:22.55:126,23,0	1/1:19,0:19:32.17:186,32,0	1/1:21,1:22:38.11:228,38,0	1/1:2,0:2:5.85:33,6,0	1/1:6,0:6:17.06:91,17,0	1/1:10,2:12:26.12:152,26,0	1/1:26,1:27:52.65:308,53,0	1/1:6,0:6:2.90:17,3,0	1/1:12,0:12:20.42:118,20,0	1/1:15,2:17:29.21:170,29,0	1/1:8,0:8:5.80:32,6,0	1/1:23,2:24:31.37:181,31,0	1/1:19,0:19:49.36:266,49,0	1/1:18,2:20:42.26:235,42,0	1/1:5,0:5:13.67:73,14,0
chr10	10042499	.	A	AC	5199.51	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=3.768;DP=375;FS=9.618;HRun=1;HaplotypeScore=368.1277;InbreedingCoeff=0.7349;MQ=29.15;MQ0=0;MQRankSum=-0.347;QD=14.28;ReadPosRankSum=4.635;VQSLOD=2.8972;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,11:12:17.70:113,18,0	1/1:0,6:6:11.87:81,12,0	0/0:5,0:5:14.44:0,14,117	0/0:6,0:4:9.09:0,9,60	1/1:1,10:11:11.67:69,12,0	1/1:0,13:12:20.24:123,20,0	1/1:0,7:7:11.57:66,12,0	1/1:1,9:10:29.43:287,29,0	1/1:1,19:20:38.48:250,38,0	1/1:2,25:27:80.98:784,81,0	1/1:1,15:16:23.19:128,23,0	1/1:2,11:13:19.03:135,19,0	1/1:1,11:12:23.34:136,23,0	1/1:0,17:17:22.91:134,23,0	1/1:0,19:19:32.54:211,33,0	1/1:1,21:22:38.61:268,39,0	1/1:0,2:2:5.92:38,6,0	1/1:0,6:6:17.98:164,18,0	1/1:2,10:12:32.35:306,32,0	1/1:1,26:27:53.21:354,53,0	1/1:0,6:6:2.94:18,3,0	1/1:0,11:12:20.45:121,20,0	1/1:2,15:17:29.16:168,29,0	1/1:0,8:8:5.86:38,6,0	1/1:2,23:24:32.60:220,33,0	1/1:0,19:19:53.99:522,54,0	1/1:2,18:20:44.29:326,44,0	1/1:0,5:5:15:139,15,0
chr10	10042504	.	AC	A	2770.35	PASS	AB=0.955;AC=48;AF=0.857;AN=56;BaseQRankSum=4.440;DP=372;FS=4.451;HRun=1;HaplotypeScore=374.7838;InbreedingCoeff=0.3431;MQ=28.91;MQ0=0;MQRankSum=-1.393;QD=7.63;ReadPosRankSum=5.795;VQSLOD=1.0323;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,2:12:17.21:89,17,0	1/1:6,0:6:11.50:61,12,0	0/0:4,0:4:6.49:0,6,65	0/0:5,0:3:5.91:0,6,38	1/1:10,0:10:11.42:59,11,0	1/1:13,0:12:17.30:93,17,0	1/1:6,1:7:9.67:48,10,0	0/1:9,1:10:10.99:65,0,11	1/1:20,0:20:37.25:190,37,0	1/1:27,0:27:53.14:313,53,0	1/1:16,0:16:22.91:119,23,0	1/1:13,0:13:18.45:94,18,0	0/1:12,0:12:0.69:54,0,1	1/1:17,0:17:20.07:107,20,0	1/1:19,0:19:31.42:159,31,0	1/1:22,0:22:37.27:190,37,0	1/1:2,0:2:5.78:30,6,0	1/1:6,0:6:16.92:85,17,0	0/1:12,0:12:4.85:64,0,5	1/1:27,0:27:51.67:266,52,0	1/1:6,0:6:2.87:16,3,0	1/1:11,1:12:19.72:99,20,0	1/1:16,1:17:28.65:148,29,0	1/1:8,0:8:5.64:28,6,0	1/1:24,1:24:30:152,30,0	1/1:18,1:19:31.65:206,32,0	0/1:18,1:20:0.95:96,0,1	1/1:5,0:5:13.24:63,13,0
chr10	10042505	.	C	CA	3653.86	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=2.185;DP=326;FS=2.362;HRun=1;HaplotypeScore=346.1807;InbreedingCoeff=0.6111;MQ=32.10;MQ0=0;MQRankSum=2.067;QD=11.53;ReadPosRankSum=3.450;VQSLOD=2.5796;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,9:11:16.21:69,16,0	1/1:0,6:6:11.08:50,11,0	0/0:5,0:5:8.46:0,8,61	0/0:4,0:2:2.15:0,2,26	1/1:0,9:9:10.80:48,11,0	1/1:0,12:11:16.52:72,17,0	1/1:1,5:6:10.99:68,11,0	1/1:1,7:8:23.48:263,23,0	1/1:0,19:19:35.79:164,36,0	1/1:0,24:24:71.22:578,71,0	1/1:0,13:13:21.11:86,21,0	1/1:1,9:10:17.32:81,17,0	1/1:0,10:10:13.86:57,14,0	1/1:0,17:17:19.21:84,19,0	1/1:0,15:15:30.03:132,30,0	1/1:0,19:19:36.59:182,37,0	1/1:0,2:2:5.49:24,5,0	1/1:0,6:6:17.50:136,18,0	1/1:0,8:8:23.53:181,24,0	1/1:0,26:26:49.55:239,50,0	1/1:0,6:6:2.74:12,3,0	1/1:1,10:11:18.81:80,19,0	1/1:1,12:13:26.51:107,27,0	1/1:0,8:8:5.49:34,5,0	1/1:1,18:18:30.99:174,31,0	1/1:1,17:18:50.31:424,50,0	1/1:2,14:16:33.35:197,33,0	1/1:0,5:5:14.67:111,15,0
chr10	10042511	.	TGCG	T	1822.87	PASS	AB=0.500;AC=49;AF=0.907;AN=54;BaseQRankSum=4.093;DP=218;FS=1.700;HRun=0;HaplotypeScore=304.1663;InbreedingCoeff=0.5008;MQ=48.00;MQ0=0;MQRankSum=-0.896;QD=8.76;ReadPosRankSum=4.391;VQSLOD=2.4085;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,9:9:15.36:57,15,0	1/1:0,4:4:10.14:38,10,0	0/0:5,0:5:11.79:0,12,103	0/0:5,0:4:1.33:0,1,60	1/1:0,5:5:10.29:40,10,0	1/1:0,7:7:14.68:54,15,0	0/1:0,5:5:0.85:25,0,1	./.	1/1:0,12:13:34.03:138,34,0	1/1:0,17:17:44.85:185,45,0	1/1:0,9:9:21.14:86,21,0	1/1:1,9:10:16.89:79,17,0	1/1:0,5:5:12.38:47,12,0	1/1:1,7:8:18.64:76,19,0	1/1:0,11:11:29.14:119,29,0	1/1:0,14:14:33.68:131,34,0	1/1:0,2:2:5.19:21,5,0	1/1:0,4:4:8.40:34,8,0	1/1:0,4:4:10.62:43,11,0	1/1:0,19:19:45.44:170,45,0	1/1:0,1:1:2.60:10,3,0	1/1:0,9:9:18.85:81,19,0	1/1:0,10:10:26.76:112,27,0	1/1:0,4:4:3.84:14,4,0	1/1:0,12:12:29.07:116,29,0	1/1:0,12:12:29.19:120,29,0	1/1:1,10:11:27.51:113,28,0	1/1:0,3:3:7.34:27,7,0
chr10	10042515	.	AT	A	1095.95	PASS	AB=0.750;AC=50;AF=0.926;AN=54;BaseQRankSum=2.762;DP=216;FS=0.000;HRun=2;HaplotypeScore=300.3705;InbreedingCoeff=0.4184;MQ=51.16;MQ0=0;MQRankSum=-1.986;QD=5.17;ReadPosRankSum=2.977;VQSLOD=0.2807;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,9:9:11.97:34,12,0	1/1:0,4:4:7.87:23,8,0	0/0:4,0:4:4.40:0,4,15	0/1:4,0:3:3.18:3,0,3	1/1:0,5:5:9.23:31,9,0	1/1:0,7:7:11.36:34,11,0	1/1:0,5:5:8.25:25,8,0	./.	1/1:0,13:13:29.17:102,29,0	1/1:0,17:17:20.23:49,20,0	1/1:0,9:9:11.28:51,11,0	1/1:1,9:10:13.37:56,13,0	1/1:0,5:5:9.48:32,9,0	1/1:1,7:8:17.09:64,17,0	1/1:0,11:11:24.15:84,24,0	1/1:0,14:14:30.18:102,30,0	1/1:0,2:2:4.59:15,5,0	1/1:0,4:4:7.86:29,8,0	1/1:0,4:4:3.07:7,3,0	1/1:0,19:19:29.21:105,29,0	1/1:0,1:1:2.04:6,2,0	1/1:0,9:9:16.56:58,17,0	1/1:0,10:10:23.97:87,24,0	0/1:0,4:4:2.03:2,0,9	1/1:0,12:12:23.97:82,24,0	1/1:0,12:12:14.45:34,14,0	1/1:2,9:11:18.14:69,18,0	1/1:0,3:3:3.99:10,4,0
chr10	10042526	.	GA	G	8018.05	PASS	AB=0.762;AC=54;AF=0.964;AN=56;BaseQRankSum=1.615;DP=264;FS=2.169;HRun=2;HaplotypeScore=278.0121;InbreedingCoeff=-0.0554;MQ=64.49;MQ0=0;MQRankSum=-2.829;QD=30.37;ReadPosRankSum=2.186;VQSLOD=4.0686;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,9:10:27.08:318,27,0	1/1:1,4:5:15.05:182,15,0	0/1:4,4:8:12.49:89,0,12	0/1:5,1:6:8.25:70,0,8	1/1:0,5:5:12.04:140,12,0	1/1:1,7:8:21.06:249,21,0	1/1:1,5:6:14.53:146,15,0	1/1:3,0:3:9.02:100,9,0	1/1:3,13:16:42.13:498,42,0	1/1:3,17:20:60.19:736,60,0	1/1:0,9:9:27.01:295,27,0	1/1:2,10:12:28.82:353,29,0	1/1:6,5:11:27.04:296,27,0	1/1:1,8:9:24.05:279,24,0	1/1:2,11:13:36.11:424,36,0	1/1:4,14:18:48.15:570,48,0	1/1:1,2:3:9.03:110,9,0	1/1:0,4:4:12.04:145,12,0	1/1:0,4:4:12.04:148,12,0	1/1:4,19:23:63.10:719,63,0	1/1:3,1:4:3.01:35,3,0	1/1:1,9:10:27.08:317,27,0	1/1:1,10:11:33.06:372,33,0	1/1:2,4:6:6:68,6,0	1/1:0,12:12:36.11:424,36,0	1/1:0,12:12:34.35:408,34,0	1/1:2,11:13:36.10:419,36,0	1/1:0,3:3:9.03:110,9,0
chr10	10042527	.	A	AAG	13392.89	PASS	AB=1.000;AC=54;AF=0.964;AN=56;BaseQRankSum=0.759;DP=424;FS=0.000;HRun=0;HaplotypeScore=360.5922;InbreedingCoeff=-0.0388;MQ=55.84;MQ0=0;MQRankSum=-2.763;QD=31.59;ReadPosRankSum=0.555;VQSLOD=3.2518;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:20:51.03:602,51,0	1/1:10,0:10:30.09:367,30,0	0/1:8,0:8:44.17:122,0,44	0/1:7,0:7:6.78:60,0,7	1/1:13,0:13:24.07:270,24,0	1/1:13,0:13:33.10:398,33,0	1/1:13,0:13:22.71:355,23,0	1/1:21,0:21:58.05:953,58,0	1/1:17,3:20:54.16:644,54,0	1/1:27,0:27:78.26:1117,78,0	1/1:16,0:16:36.05:398,36,0	1/1:14,2:16:37.41:480,37,0	1/1:17,1:18:48.13:576,48,0	1/1:13,0:13:36.08:417,36,0	1/1:18,0:18:51.15:608,51,0	1/1:22,0:22:60.18:713,60,0	1/1:9,0:9:21.07:281,21,0	1/1:6,0:6:18.04:215,18,0	1/1:9,0:9:27.09:403,27,0	1/1:32,1:33:87.05:1055,87,0	1/1:4,3:7:12.04:142,12,0	1/1:18,0:18:42.11:491,42,0	1/1:16,1:18:51.15:612,51,0	1/1:11,0:11:9.03:102,9,0	1/1:16,0:16:45.13:533,45,0	1/1:16,0:16:45.01:581,45,0	1/1:22,0:22:63.10:746,63,0	1/1:4,0:4:12.04:151,12,0
chr10	10043059	.	A	AG	26212.84	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-6.494;DP=684;FS=6.918;HRun=1;HaplotypeScore=66.5823;InbreedingCoeff=0.9918;MQ=86.32;MQ0=0;MQRankSum=-10.812;QD=41.02;ReadPosRankSum=6.083;VQSLOD=4.8093;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,43:45:99:1704,114,0	1/1:0,13:13:36.12:540,36,0	0/0:25,0:24:69.14:0,69,840	0/0:20,0:20:42.11:0,42,675	1/1:1,25:27:75.25:1119,75,0	1/1:0,21:21:60.20:899,60,0	1/1:0,28:28:84.28:1259,84,0	1/1:2,29:31:81.26:1190,81,0	1/1:0,32:32:93.32:1394,93,0	1/1:1,29:30:84.27:1231,84,0	1/1:0,22:22:57.19:854,57,0	1/1:0,26:26:63.21:944,63,0	1/1:2,25:27:75.25:1120,75,0	1/1:1,25:26:72.24:1079,72,0	1/1:1,28:29:78.26:1169,78,0	1/1:2,24:26:69.23:1023,69,0	1/1:0,33:33:96.33:1439,96,0	1/1:1,24:25:69.23:1029,69,0	1/1:1,16:17:45.11:649,45,0	1/1:1,39:40:99:1637,111,0	1/1:0,22:22:54.18:809,54,0	1/1:0,17:17:45.15:674,45,0	1/1:0,17:17:51.17:763,51,0	1/1:1,24:25:69.23:1034,69,0	1/1:0,18:18:51.17:763,51,0	1/1:0,24:24:72.24:1079,72,0	1/1:0,13:13:39.13:585,39,0	1/1:0,5:5:15.05:225,15,0
chr10	10046445	.	A	ATT	9359.62	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=4.435;DP=680;FS=0.735;HRun=8;HaplotypeScore=163.6561;InbreedingCoeff=0.9737;MQ=76.18;MQ0=0;MQRankSum=-7.040;QD=14.47;ReadPosRankSum=3.735;VQSLOD=1.4741;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,0:33:35.98:275,36,0	1/1:4,0:15:27.80:105,28,0	0/0:20,0:19:47.49:0,47,508	0/0:13,0:13:26.81:0,27,266	1/1:7,22:30:69.11:1001,69,0	1/1:1,24:25:57.19:905,57,0	1/1:6,20:26:63.21:998,63,0	1/1:6,1:37:70.48:369,70,0	1/1:4,26:31:60.16:906,60,0	1/1:4,0:24:53.12:201,53,0	1/1:3,0:37:81.62:344,82,0	1/1:2,0:22:48.06:177,48,0	1/1:2,0:20:42.85:161,43,0	1/1:3,0:15:30.05:109,30,0	1/1:4,0:22:46.26:168,46,0	1/1:5,0:22:38.46:184,38,0	1/1:3,0:21:42.42:154,42,0	1/1:0,0:19:45.43:187,45,0	1/1:3,0:32:71.64:320,72,0	1/1:1,0:34:80.51:301,81,0	1/1:0,0:18:43.28:167,43,0	1/1:1,0:22:52.91:212,53,0	1/1:2,0:30:68.77:266,69,0	1/1:3,0:8:9.98:36,10,0	1/1:4,23:28:75.25:1171,75,0	1/1:3,0:28:63.14:249,63,0	1/1:3,0:36:85.03:304,85,0	1/1:2,0:12:24.95:91,25,0
chr10	10046706	.	TGG	T	812.87	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.241;DP=627;FS=8.000;HRun=2;HaplotypeScore=83.8900;InbreedingCoeff=0.9991;MQ=86.28;MQ0=0;MQRankSum=-7.689;QD=25.40;ReadPosRankSum=0.001;VQSLOD=1.7967;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,102,1982	0/0:10,0:10:30.10:0,30,610	0/0:24,0:24:57.52:0,58,1218	0/0:19,0:20:33.51:0,34,892	1/1:0,17:19:56.87:539,57,0	0/0:23,0:23:69.24:0,69,1389	0/0:20,0:20:60.18:0,60,1172	0/0:36,0:36:99:0,108,2186	0/0:18,0:18:54.19:0,54,1097	0/0:22,0:22:66.23:0,66,1335	0/0:19,0:19:57.20:0,57,1158	0/0:22,0:22:66.23:0,66,1341	0/0:26,0:26:78.27:0,78,1582	0/0:25,0:25:75.26:0,75,1504	0/0:33,0:33:99:0,99,1999	0/0:27,0:27:81.28:0,81,1644	0/0:23,0:23:69.24:0,69,1402	0/0:12,0:12:33.09:0,33,632	0/0:12,0:12:36.12:0,36,724	0/0:33,0:33:99:0,99,2002	0/0:25,0:25:72.23:0,72,1427	0/0:21,0:21:63.22:0,63,1270	0/0:26,0:26:75.24:0,75,1488	0/0:21,0:21:63.22:0,63,1268	1/1:1,12:13:39.08:395,39,0	0/0:24,0:24:72.25:0,72,1463	0/0:29,0:29:87.30:0,87,1754	0/0:10,0:10:30.10:0,30,610
chr10	10046709	.	AC	A	422.98	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.220;DP=617;FS=3.368;HRun=3;HaplotypeScore=71.5226;InbreedingCoeff=0.9988;MQ=83.26;MQ0=0;MQRankSum=-9.118;QD=13.64;ReadPosRankSum=0.759;VQSLOD=2.6770;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:93.30:0,93,1318	0/0:10,0:10:30.10:0,30,432	0/0:20,0:20:48.55:0,49,657	0/0:18,0:18:42.06:0,42,560	1/1:2,17:19:52.28:319,52,0	0/0:25,0:25:75.09:0,75,993	0/0:19,0:19:57.19:0,57,820	0/0:35,0:35:99:0,99,1388	0/0:18,0:18:54.11:0,54,752	0/0:22,0:22:66.22:0,66,951	0/0:19,0:19:54.17:0,54,760	0/0:21,0:21:63.21:0,63,907	0/0:25,0:25:75.25:0,75,1078	0/0:25,0:25:72.24:0,72,1030	0/0:33,0:33:99:0,99,1425	0/0:26,0:26:78.19:0,78,1097	0/0:25,0:25:72.20:0,72,994	0/0:10,0:10:30.10:0,30,432	0/0:17,0:17:45.10:0,45,563	0/0:32,0:32:96.27:0,96,1325	0/0:23,0:23:69.23:0,69,993	0/0:21,0:21:60.20:0,60,863	0/0:25,0:25:75.22:0,75,1026	0/0:21,0:21:63.21:0,63,906	1/1:1,11:12:35.42:226,35,0	0/0:24,0:24:69.23:0,69,994	0/0:30,0:30:87.28:0,87,1233	0/0:11,0:11:27.08:0,27,370
chr10	10047574	.	GC	G	18196.95	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-4.335;DP=699;FS=2.871;HRun=6;HaplotypeScore=77.2193;InbreedingCoeff=0.9165;MQ=84.68;MQ0=0;MQRankSum=-9.131;QD=28.00;ReadPosRankSum=6.686;VQSLOD=4.8403;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,57:60:99:1708,159,0	1/1:0,13:13:33.08:355,33,0	0/0:24,0:24:56:0,56,682	0/0:25,0:24:59.97:0,60,699	1/1:3,22:25:63.16:676,63,0	1/1:2,22:24:60.15:645,60,0	1/1:1,15:16:42.11:451,42,0	1/1:4,23:27:69.10:705,69,0	1/1:2,26:28:78.19:837,78,0	1/1:2,23:25:69.16:732,69,0	1/1:3,23:26:69.17:741,69,0	1/1:1,20:21:54.14:580,54,0	1/1:0,19:19:57.14:612,57,0	1/1:1,26:27:66.17:708,66,0	1/1:1,26:27:72.18:774,72,0	1/1:3,17:20:51.13:548,51,0	1/1:3,27:30:81.20:870,81,0	1/1:1,17:18:45.11:483,45,0	1/1:0,22:22:66.09:674,66,0	1/1:1,23:24:60.13:637,60,0	1/1:2,32:34:87.22:935,87,0	1/1:0,21:21:54.14:580,54,0	1/1:0,31:31:78.20:837,78,0	1/1:1,29:30:87.22:935,87,0	1/1:4,25:29:60.15:645,60,0	1/1:2,27:29:81.16:852,81,0	1/1:0,22:22:60.15:644,60,0	1/1:0,2:2:3.01:32,3,0
chr10	10051223	.	AT	A	18103.46	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-2.752;DP=579;FS=3.470;HRun=3;HaplotypeScore=61.0125;InbreedingCoeff=0.9818;MQ=93.65;MQ0=0;MQRankSum=-11.331;QD=34.35;ReadPosRankSum=5.953;VQSLOD=5.0255;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,39:39:99:1413,114,0	1/1:1,4:5:12.04:149,12,0	0/0:30,0:30:87.29:0,87,1231	0/0:21,0:21:54.64:0,55,736	1/1:1,20:21:54.17:669,54,0	1/1:0,20:20:60.19:744,60,0	1/1:1,26:27:75.24:930,75,0	1/1:0,17:17:51.15:619,51,0	1/1:1,14:15:39.12:484,39,0	1/1:1,39:40:99:1436,117,0	1/1:0,17:17:48.15:595,48,0	1/1:0,19:19:57.18:707,57,0	1/1:1,16:17:48.15:595,48,0	1/1:3,9:12:30.09:367,30,0	1/1:1,16:17:45.14:558,45,0	1/1:1,15:16:42.13:521,42,0	1/1:1,29:30:78.25:967,78,0	1/1:2,16:18:48.15:595,48,0	1/1:1,25:26:75.22:916,75,0	1/1:0,18:18:48.15:595,48,0	1/1:1,36:37:99:1227,99,0	1/1:0,17:17:51.16:632,51,0	1/1:2,12:14:36.11:446,36,0	1/1:0,19:19:54.17:670,54,0	1/1:1,12:13:33.10:409,33,0	1/1:0,20:20:60.19:744,60,0	1/1:0,24:24:69.22:855,69,0	1/1:0,9:9:21.07:260,21,0
chr10	10052013	.	ACACACACACACACAC	A	3572.74	PASS	AB=1.000;AC=41;AF=0.759;AN=54;BaseQRankSum=-2.242;DP=574;FS=9.040;HRun=0;HaplotypeScore=118.2128;InbreedingCoeff=0.2913;MQ=40.56;MQ0=85;MQRankSum=2.944;QD=8.23;ReadPosRankSum=2.736;VQSLOD=1.5836;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:35,0:24:16.94:227,17,0	1/1:7,1:8:6.02:197,6,0	0/0:22,0:2:6.02:0,6,80	0/0:31,0:6:8.99:0,9,91	1/1:17,0:11:2.57:37,3,0	0/1:24,0:13:7.07:65,0,7	0/0:30,0:28:2.99:0,3,24	0/1:20,0:14:27.20:140,0,27	0/0:11,0:6:3.95:0,4,104	1/1:20,0:16:8.84:212,9,0	1/1:17,0:12:9.03:114,9,0	1/1:4,11:13:9.03:269,9,0	1/1:9,0:7:6.02:76,6,0	1/1:13,0:11:9.03:182,9,0	1/1:28,0:26:8.36:151,8,0	1/1:24,2:25:1.78:512,2,0	1/1:34,0:29:3.26:70,3,0	1/1:23,0:16:9.47:101,9,0	1/1:13,0:10:12.60:150,13,0	1/1:5,13:17:6.02:202,6,0	0/0:31,0:24:0.89:0,1,2	1/1:8,11:16:5.91:109,6,0	./.	1/1:28,2:24:5.80:177,6,0	1/1:25,0:15:2.90:38,3,0	1/1:12,0:11:5.62:129,6,0	1/1:15,0:10:20.66:302,21,0	0/1:13,0:9:28.01:112,0,28
chr10	10052015	.	ACACACACACACAC	A	4171.62	PASS	AB=0.979;AC=43;AF=0.796;AN=54;BaseQRankSum=-2.556;DP=577;FS=11.728;HRun=0;HaplotypeScore=107.2102;InbreedingCoeff=0.3397;MQ=40.34;MQ0=91;MQRankSum=1.654;QD=8.88;ReadPosRankSum=2.402;VQSLOD=1.3752;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:36,0:24:20.16:265,20,0	1/1:2,6:8:6.02:209,6,0	0/0:19,0:2:6.02:0,6,80	0/0:28,0:5:8.99:0,9,91	1/1:18,0:12:5.84:76,6,0	0/1:23,0:12:3.92:66,0,4	1/1:30,0:28:1.82:5,2,0	0/1:21,0:14:21.28:141,0,21	0/0:11,0:6:4.37:0,4,89	1/1:7,13:17:18.05:295,18,0	1/1:17,0:12:9.03:114,9,0	1/1:16,0:13:9.03:204,9,0	1/1:11,0:8:9.03:114,9,0	1/1:12,0:11:9.03:168,9,0	1/1:6,18:22:8.54:242,9,0	1/1:9,16:24:12.25:649,12,0	1/1:15,19:29:3.09:114,3,0	1/1:22,0:15:12.20:107,12,0	1/1:13,0:10:12.95:151,13,0	1/1:19,0:17:6.02:139,6,0	0/0:34,0:25:0.89:0,1,2	1/1:19,0:16:5.69:72,6,0	./.	1/1:10,20:24:5.63:189,6,0	1/1:26,0:16:5.60:76,6,0	1/1:14,0:12:16.65:198,17,0	1/1:14,2:10:20.98:398,21,0	0/1:14,1:9:11.86:179,0,12
chr10	10052021	.	ACACACAC	A	3626.36	PASS	AB=1.000;AC=47;AF=0.870;AN=54;BaseQRankSum=-2.063;DP=571;FS=30.320;HRun=0;HaplotypeScore=83.6425;InbreedingCoeff=0.4524;MQ=38.46;MQ0=108;MQRankSum=3.101;QD=7.31;ReadPosRankSum=3.438;VQSLOD=0.0845;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:38,0:24:26.44:342,26,0	1/1:7,0:7:6.02:107,6,0	0/0:22,0:3:9.02:0,9,105	0/0:27,0:6:15:0,15,152	1/1:17,0:10:6.42:77,6,0	1/1:24,0:12:7.19:101,7,0	1/1:7,20:25:3.01:71,3,0	0/1:22,0:11:12.04:178,0,12	0/0:12,0:6:3.95:0,4,55	1/1:18,0:15:18.06:242,18,0	1/1:18,0:12:9.03:114,9,0	1/1:15,0:12:9.03:130,9,0	1/1:11,0:8:9.03:114,9,0	1/1:12,0:9:9.03:126,9,0	1/1:22,0:20:8.54:122,9,0	1/1:24,0:23:12.63:349,13,0	1/1:33,0:27:3.39:54,3,0	1/1:21,0:14:17.20:155,17,0	1/1:11,0:8:16.86:192,17,0	1/1:19,0:16:6.02:91,6,0	1/1:41,0:27:5.42:75,5,0	1/1:18,0:14:5.69:49,6,0	./.	1/1:30,0:24:5.93:92,6,0	1/1:23,0:13:9.03:114,9,0	1/1:14,0:11:23.06:243,23,0	1/1:17,0:10:24.08:337,24,0	1/1:14,0:8:12.82:148,13,0
chr10	10053107	.	C	CCCT	8075.74	PASS	AB=0.821;AC=25;AF=0.446;AN=56;BaseQRankSum=-0.070;DP=694;FS=56.158;HRun=0;HaplotypeScore=133.4398;InbreedingCoeff=-0.8355;MQ=45.30;MQ0=11;MQRankSum=-2.566;QD=13.03;ReadPosRankSum=4.379;VQSLOD=1.8695;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:30,11:38:99:538,0,481	0/1:5,5:10:99:167,0,113	0/0:28,0:4:5.81:0,6,83	0/0:37,0:8:8.97:0,9,88	0/1:14,3:15:99:120,0,257	0/1:12,4:12:68.78:229,0,69	0/1:30,5:35:99:182,0,471	0/1:19,5:22:10.59:542,0,11	0/1:14,3:15:99:210,0,209	0/1:27,6:32:99:585,0,442	0/1:10,2:10:35.26:35,0,155	0/1:18,3:19:99:327,0,216	0/1:29,5:24:99:230,0,468	0/1:22,5:23:67.33:436,0,67	0/1:25,5:24:99:300,0,152	0/1:14,8:20:61.64:448,0,62	0/1:16,4:17:82.45:200,0,82	0/1:10,3:13:99:188,0,102	0/1:14,1:14:99:131,0,232	0/1:18,2:21:99:216,0,165	0/1:47,19:60:99:910,0,685	0/1:13,2:15:99:102,0,178	0/1:16,3:18:99:185,0,266	0/1:29,11:35:99:589,0,167	0/1:14,7:19:99:374,0,160	0/1:21,9:28:99:428,0,336	0/1:12,5:16:90.70:402,0,91	0/0:9,0:8:4.06:0,4,226
chr10	10053345	.	CCTCT	C	1214.65	PASS	AB=0.989;AC=22;AF=0.440;AN=50;BaseQRankSum=9.380;DP=526;FS=30.313;HRun=0;HaplotypeScore=89.5928;InbreedingCoeff=-0.6754;MQ=23.73;MQ0=205;MQRankSum=-3.313;QD=2.76;ReadPosRankSum=7.618;VQSLOD=-0.4729;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:37,0:24:99:231,0,327	./.	./.	./.	0/1:7,0:4:14.05:14,0,56	0/1:10,0:3:17.23:17,0,81	0/1:35,1:21:99:167,0,392	0/0:10,0:3:9.01:0,9,152	0/1:21,0:8:27.34:27,0,195	0/1:20,0:14:64.83:65,0,569	0/0:8,0:5:7.65:0,8,129	0/1:18,0:9:65.38:65,0,180	0/1:27,0:15:81.70:82,0,113	0/1:20,0:10:88.99:89,0,222	0/1:30,0:8:48.88:49,0,76	0/1:11,0:5:54.42:54,0,93	0/1:19,0:9:31.38:31,0,172	0/1:24,1:15:90.06:90,0,357	0/1:12,0:5:31.45:31,0,148	0/1:12,0:9:20.40:20,0,79	0/1:27,6:19:98.90:99,0,248	0/1:17,0:13:31.58:32,0,37	1/1:10,0:6:4.79:26,5,0	0/1:38,0:18:30.26:30,0,564	0/0:12,0:9:11.93:0,12,152	0/1:26,0:12:76.22:126,0,76	0/1:11,0:5:11.19:11,0,242	0/0:8,0:4:1.55:0,2,4
chr10	10053434	.	TTC	T	3201.58	PASS	AB=0.852;AC=22;AF=0.407;AN=54;BaseQRankSum=9.863;DP=695;FS=25.744;HRun=0;HaplotypeScore=131.9001;InbreedingCoeff=-0.7073;MQ=42.23;MQ0=42;MQRankSum=-7.049;QD=6.60;ReadPosRankSum=-5.786;VQSLOD=0.3917;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:52:3.09:0,3,1458	0/1:5,4:9:88.63:89,0,142	0/0:50,0:7:17.99:0,18,264	0/0:64,0:10:5.50:0,6,203	0/1:15,4:14:99:104,0,330	0/1:14,9:21:99:151,0,591	0/1:39,11:50:99:386,0,1100	0/0:15,0:9:21.07:0,21,345	0/1:21,6:24:99:192,0,824	0/1:16,0:16:99:247,0,316	0/1:15,6:20:99:120,0,590	0/0:25,0:22:38.18:0,38,966	0/1:21,0:21:60.76:61,0,396	0/1:13,10:20:99:290,0,522	0/1:30,0:28:99:105,0,658	0/1:23,0:20:5.97:6,0,672	0/1:16,9:24:99:286,0,468	0/1:15,4:18:99:236,0,345	0/1:17,0:15:68.60:69,0,414	0/1:7,4:10:99:124,0,215	0/1:22,3:24:99:201,0,635	0/1:19,0:18:40.92:41,0,396	0/1:17,0:17:46.31:46,0,440	0/1:27,8:30:99:204,0,721	0/1:9,4:13:99:137,0,309	0/1:16,6:19:99:181,0,523	0/1:14,4:17:77.70:78,0,521	./.
chr10	10053436	.	C	CTCCT	6152.68	PASS	AB=0.865;AC=24;AF=0.444;AN=54;BaseQRankSum=9.796;DP=711;FS=50.456;HRun=0;HaplotypeScore=142.6392;InbreedingCoeff=-0.8402;MQ=42.55;MQ0=43;MQRankSum=-4.199;QD=10.61;ReadPosRankSum=-2.873;VQSLOD=2.2807;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:35,18:52:99:105,0,1162	0/1:8,1:9:86.88:203,0,87	0/0:50,0:7:18.06:0,18,280	0/0:63,0:9:6.73:0,7,189	0/1:18,1:14:99:109,0,281	0/1:23,0:21:99:258,0,438	0/1:41,10:51:99:434,0,1062	0/0:18,0:11:0.61:0,1,322	0/1:27,1:25:99:328,0,769	0/1:8,8:18:99:439,0,264	0/1:19,2:20:99:120,0,580	0/1:22,5:25:74.69:75,0,830	0/1:10,12:22:99:206,0,390	0/1:22,1:20:99:488,0,493	0/1:17,13:28:99:429,0,629	0/1:20,4:21:99:140,0,603	0/1:24,1:24:99:450,0,413	0/1:17,2:18:99:301,0,344	0/1:13,5:17:99:352,0,368	0/1:11,1:11:99:156,0,213	0/1:24,0:23:99:234,0,498	0/1:10,9:19:99:135,0,386	0/1:10,8:18:99:130,0,439	0/1:35,0:30:99:338,0,642	0/1:14,0:13:99:215,0,248	0/1:22,0:19:99:384,0,446	0/1:17,1:17:99:123,0,490	./.
chr10	10053449	.	T	TCTC	356.50	PASS	AB=0.830;AC=3;AF=0.056;AN=54;BaseQRankSum=3.542;DP=702;FS=29.594;HRun=0;HaplotypeScore=151.2832;InbreedingCoeff=-0.0564;MQ=43.26;MQ0=44;MQRankSum=1.468;QD=6.04;ReadPosRankSum=5.996;VQSLOD=1.3386;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:52:77.60:0,78,1139	0/0:10,0:10:15.02:0,15,295	0/0:49,0:6:8.99:0,9,99	0/0:54,0:10:14.32:0,14,129	0/1:12,9:15:99:217,0,142	0/0:22,0:20:16.70:0,17,594	0/0:54,0:54:24.75:0,25,1431	0/0:18,0:10:24.04:0,24,335	0/0:20,0:20:47.94:0,48,762	0/0:20,0:20:37.99:0,38,748	0/0:17,0:16:39.12:0,39,603	0/0:32,0:32:42.47:0,42,743	0/0:23,0:23:36.39:0,36,566	0/0:20,0:17:51.14:0,51,693	0/0:28,0:27:50.93:0,51,665	0/0:22,0:18:26.13:0,26,433	0/0:29,0:27:55.17:0,55,800	0/0:22,0:21:53.66:0,54,759	0/0:23,0:16:44.89:0,45,530	0/0:11,0:11:30.09:0,30,445	0/1:23,0:22:2.90:3,0,551	0/0:23,0:23:48.62:0,49,707	0/0:16,0:16:26.97:0,27,393	0/0:35,0:31:21.59:0,22,817	0/1:11,4:14:99:228,0,250	0/0:20,0:18:25.06:0,25,551	0/0:18,0:18:42.09:0,42,598	./.
chr10	10054878	.	C	CT	6157.51	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-10.993;DP=893;FS=0.342;HRun=1;HaplotypeScore=92.2905;InbreedingCoeff=0.9995;MQ=74.27;MQ0=0;MQRankSum=-2.457;QD=39.47;ReadPosRankSum=3.086;VQSLOD=5.2745;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,126,1605	0/0:20,0:20:60.20:0,60,778	0/0:25,0:24:62.29:0,62,770	0/0:19,0:19:36.07:0,36,507	1/1:1,28:29:66.15:954,66,0	1/1:0,30:30:87.29:1303,87,0	1/1:0,29:29:81.27:1214,81,0	0/0:28,0:28:78.25:0,78,1000	1/1:0,37:38:99:1525,102,0	0/0:51,0:51:99:0,147,1884	0/0:26,0:26:75.24:0,75,961	0/0:36,0:36:99:0,105,1337	0/0:31,0:31:87.27:0,87,1113	0/0:42,0:42:99:0,120,1557	0/0:42,0:42:99:0,120,1530	0/0:47,0:47:99:0,141,1802	0/0:23,0:23:63.20:0,63,817	0/0:11,0:11:24.49:0,24,365	0/0:34,0:34:96.27:0,96,1225	0/0:39,0:39:99:0,111,1389	0/0:28,0:28:84.27:0,84,1090	0/0:50,0:50:99:0,144,1854	0/0:31,0:31:81.24:0,81,1023	0/0:31,0:31:93.24:0,93,1149	1/1:0,30:30:78.26:1162,78,0	0/0:37,0:37:99:0,111,1357	0/0:28,0:28:84.24:0,84,1060	0/0:16,0:16:48.16:0,48,622
chr10	10055214	.	T	TAC	5855.71	PASS	AB=0.936;AC=30;AF=0.536;AN=56;BaseQRankSum=-0.701;DP=1700;FS=42.160;HRun=0;HaplotypeScore=607.1585;InbreedingCoeff=-0.7114;MQ=43.00;MQ0=51;MQRankSum=-5.336;QD=3.49;ReadPosRankSum=-3.110;VQSLOD=0.2885;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:46,2:43:3.75:25,4,0	0/1:34,2:36:99:134,0,206	0/0:20,0:7:21.07:0,21,263	0/1:23,0:5:4.25:4,0,118	0/1:54,8:62:99:124,0,942	0/1:59,2:60:99:113,0,910	0/1:46,5:50:38.02:38,0,333	0/1:92,0:56:99:129,0,303	0/1:72,19:91:99:128,0,828	0/1:122,10:125:99:763,0,880	0/1:44,4:47:99:133,0,111	0/1:63,6:68:17.95:415,0,18	0/1:77,4:78:99:273,0,115	0/1:60,7:67:31.32:221,0,31	0/1:67,8:74:2.03:384,0,2	0/1:76,8:83:74.87:154,0,75	0/1:30,1:31:2.39:78,0,2	0/1:24,1:34:99:137,0,226	0/1:36,1:23:93.33:93,0,174	0/1:76,4:78:76.75:682,0,77	0/1:67,3:70:99:367,0,146	0/1:64,3:66:99:174,0,105	1/1:67,4:69:2.59:318,3,0	1/1:51,1:51:4.42:55,4,0	0/1:59,8:67:48.01:48,0,1252	0/1:78,4:75:99:510,0,406	0/1:34,7:41:32.38:300,0,32	0/1:18,0:18:52.89:53,0,92
chr10	10056087	.	TGATG	T	7407.30	PASS	AB=0.933;AC=40;AF=0.714;AN=56;BaseQRankSum=0.299;DP=811;FS=4.610;HRun=0;HaplotypeScore=200.6387;InbreedingCoeff=0.2510;MQ=59.99;MQ0=10;MQRankSum=-1.350;QD=10.80;ReadPosRankSum=6.438;VQSLOD=3.8208;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:35,3:39:39.06:499,39,0	1/1:17,0:15:14.98:166,15,0	0/1:28,0:21:7.94:8,0,187	0/0:40,0:33:8.26:0,8,592	0/0:31,0:28:8.94:0,9,72	0/1:27,0:25:38.05:38,0,52	0/0:26,0:21:12.53:0,13,88	0/1:34,4:33:99:235,0,181	0/1:19,0:16:25.06:25,0,59	1/1:42,5:44:46.05:658,46,0	1/1:19,2:21:7.59:117,8,0	1/1:26,2:25:26.67:345,27,0	1/1:28,4:30:68.89:908,69,0	1/1:25,3:23:7.02:488,7,0	0/1:34,5:32:34.83:330,0,35	1/1:22,0:17:17.92:249,18,0	1/1:16,1:13:27.08:373,27,0	0/1:10,4:14:3.14:230,0,3	0/1:20,2:18:28.33:169,0,28	1/1:37,7:46:25.24:261,25,0	0/1:36,1:30:10.55:326,0,11	1/1:16,3:20:12.02:155,12,0	1/1:27,1:29:0.66:193,1,0	1/1:18,6:21:20.95:315,21,0	0/0:28,0:26:17.92:0,18,148	1/1:40,4:35:29.79:384,30,0	1/1:26,1:27:23.55:468,24,0	1/1:15,0:14:38.95:467,39,0
chr10	10056102	.	TG	T	1390.64	PASS	AB=0.925;AC=15;AF=0.268;AN=56;BaseQRankSum=0.483;DP=780;FS=3.109;HRun=2;HaplotypeScore=197.2429;InbreedingCoeff=0.3842;MQ=44.81;MQ0=38;MQRankSum=-3.973;QD=4.93;ReadPosRankSum=0.345;VQSLOD=0.4634;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:27:40.91:0,41,410	0/0:13,0:11:13.89:0,14,178	0/1:19,1:13:11.31:11,0,387	0/0:31,0:24:60.94:0,61,808	1/1:13,12:23:11.99:153,12,0	1/1:8,18:22:36.02:414,36,0	0/1:14,11:18:8.94:308,0,9	0/0:54,0:38:83.33:0,83,1127	1/1:11,8:13:24.95:296,25,0	0/0:48,1:37:38.82:0,39,727	0/1:23,1:23:21.09:21,0,99	0/1:27,0:22:5.23:5,0,212	0/1:32,2:30:3.03:3,0,263	0/0:31,0:24:30.36:0,30,341	0/0:42,0:31:40.23:0,40,472	0/0:18,0:14:8.73:0,9,177	0/1:17,1:13:17.06:17,0,78	0/0:10,0:10:9.11:0,9,107	0/0:25,0:12:15.29:0,15,221	0/0:40,1:39:32.15:0,32,352	0/0:42,1:31:23.84:0,24,377	0/0:26,0:23:26.94:0,27,309	0/0:24,1:23:24.80:0,25,280	0/0:24,0:19:11.46:0,11,122	1/1:9,16:22:22.31:308,22,0	0/1:38,1:26:28.62:29,0,369	0/0:24,0:21:23.29:0,23,239	0/0:14,0:14:15.10:0,15,198
chr10	10056107	.	G	GGAT	3924.19	PASS	AB=0.993;AC=29;AF=0.518;AN=56;BaseQRankSum=-0.511;DP=749;FS=13.267;HRun=0;HaplotypeScore=206.7002;InbreedingCoeff=-0.1289;MQ=41.66;MQ0=54;MQRankSum=1.485;QD=6.49;ReadPosRankSum=7.666;VQSLOD=0.9772;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:25:22.78:234,0,23	0/1:13,0:11:3.43:104,0,3	0/1:17,0:11:6.40:6,0,186	0/0:28,0:21:25.45:0,25,486	0/0:23,0:20:8.96:0,9,92	0/0:26,0:21:23.50:0,24,181	0/0:23,0:17:15.01:0,15,189	0/1:55,0:37:84.25:84,0,706	0/0:20,0:13:26.15:0,26,210	0/1:46,0:32:99:294,0,164	1/1:22,0:20:3.97:74,4,0	1/1:24,0:20:22.37:137,22,0	1/1:34,0:30:9.76:356,10,0	0/1:31,0:24:99:250,0,120	0/1:38,3:31:46.64:331,0,47	0/1:15,0:11:20.82:114,0,21	1/1:17,1:13:10.68:197,11,0	0/1:9,0:9:46.77:85,0,47	0/1:26,0:10:70.17:96,0,70	0/1:40,0:38:87.46:197,0,87	1/1:41,0:28:3.03:247,3,0	1/1:25,0:21:10.25:117,10,0	0/1:20,0:18:55.77:144,0,56	0/1:24,0:19:10.14:131,0,10	0/0:24,0:20:19.19:0,19,205	0/1:39,0:23:39.62:132,0,40	0/1:23,0:20:10.14:282,0,10	1/1:13,0:14:0.99:313,1,0
chr10	10056110	.	TG	T	2343.39	PASS	AB=0.806;AC=29;AF=0.518;AN=56;BaseQRankSum=0.227;DP=722;FS=4.783;HRun=2;HaplotypeScore=191.1720;InbreedingCoeff=-0.0757;MQ=40.14;MQ0=59;MQRankSum=0.578;QD=4.04;ReadPosRankSum=7.003;VQSLOD=0.4849;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:15,10:23:24.53:164,0,25	0/1:7,5:10:2.03:90,0,2	0/1:16,0:10:6.15:6,0,156	0/0:26,0:19:44.96:0,45,508	0/0:22,1:20:8.97:0,9,82	0/0:30,0:23:23.98:0,24,151	0/0:21,0:15:18.61:0,19,157	0/1:48,4:34:48.07:48,0,650	0/0:20,0:13:27.30:0,27,240	0/1:35,11:32:99:259,0,119	0/1:14,4:16:6.25:36,0,6	1/1:15,8:18:2.97:118,3,0	1/1:16,17:29:25.12:298,25,0	0/1:20,10:22:99:130,0,108	0/1:30,9:29:73.06:104,0,73	1/1:7,7:10:11.74:102,12,0	1/1:13,6:14:8.02:98,8,0	0/1:6,3:9:34.54:35,0,49	0/1:25,1:9:63.07:63,0,81	0/1:26,13:37:89.68:153,0,90	0/1:30,12:29:12.21:84,0,12	1/1:20,4:20:11.33:77,11,0	0/1:14,6:18:59.65:60,0,75	1/1:13,10:18:13.15:65,13,0	0/0:20,2:18:19.18:0,19,162	0/1:27,6:18:41:167,0,41	0/1:13,10:20:8.20:144,0,8	1/1:2,11:14:5.64:218,6,0
chr10	10056111	.	GGAT	G	1643.51	PASS	AB=0.995;AC=35;AF=0.625;AN=56;BaseQRankSum=1.304;DP=708;FS=8.226;HRun=0;HaplotypeScore=202.0495;InbreedingCoeff=-0.4332;MQ=38.70;MQ0=60;MQRankSum=3.688;QD=2.41;ReadPosRankSum=4.403;VQSLOD=1.4466;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:23:19.66:47,0,20	1/1:12,0:10:11.42:45,11,0	0/1:14,0:8:0.35:0,0,134	0/0:26,0:19:29.42:0,29,383	1/1:21,0:19:5.55:41,6,0	0/1:28,0:21:42.26:139,0,42	0/1:22,0:15:23.75:70,0,24	0/1:50,3:35:99:176,0,567	0/1:20,0:13:99:103,0,128	1/1:39,1:30:22.83:234,23,0	0/1:18,0:16:2.66:54,0,3	0/1:22,1:18:33.54:34,0,74	0/1:33,0:29:28.21:100,0,28	0/1:30,0:22:54.92:55,0,82	0/1:38,0:28:52:52,0,120	1/1:14,0:10:0.07:72,0,0	1/1:19,0:14:2.59:27,3,0	0/1:9,0:9:25.12:47,0,25	0/1:25,0:9:15.37:15,0,23	0/1:39,0:37:35.43:35,0,66	0/1:40,0:27:21.97:34,0,22	1/1:21,0:18:10.90:38,11,0	0/1:19,0:17:12.80:13,0,99	1/1:22,0:17:21.30:132,21,0	1/1:22,0:17:8.83:53,9,0	0/1:32,0:17:52.87:69,0,53	0/1:23,0:20:39.49:50,0,39	0/1:14,0:14:7.75:64,0,8
chr10	10056114	.	T	TG	4258.75	PASS	AB=0.813;AC=41;AF=0.732;AN=56;BaseQRankSum=0.470;DP=695;FS=9.158;HRun=1;HaplotypeScore=177.9280;InbreedingCoeff=-0.1779;MQ=37.11;MQ0=65;MQRankSum=0.984;QD=6.32;ReadPosRankSum=4.349;VQSLOD=1.4879;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,10:23:2.20:210,2,0	1/1:6,5:9:4.84:126,5,0	0/1:13,0:6:0.35:0,0,106	0/0:20,0:15:29.89:0,30,329	1/1:9,10:16:5.83:68,6,0	0/1:20,6:20:58.56:113,0,59	0/1:18,4:15:12.46:127,0,12	0/1:47,7:37:99:198,0,477	0/1:19,1:13:99:127,0,116	1/1:28,12:27:5.56:348,6,0	0/1:10,7:16:6.37:85,0,6	0/1:15,7:17:21.55:119,0,22	1/1:15,16:27:34.03:367,34,0	0/1:20,9:22:66.18:196,0,66	1/1:24,12:28:13.77:305,14,0	1/1:6,9:11:24.86:150,25,0	1/1:13,6:14:28.80:170,29,0	0/1:6,3:9:16.45:80,0,16	0/1:24,3:9:19.49:19,0,56	0/1:23,14:35:55.07:196,0,55	1/1:28,12:27:9.16:98,9,0	1/1:17,4:18:12.62:98,13,0	0/1:13,5:16:71.81:72,0,75	1/1:11,11:17:20.61:139,21,0	1/1:12,7:15:11.99:153,12,0	0/1:25,7:17:29.80:188,0,30	1/1:13,10:20:4.39:195,4,0	1/1:3,11:14:12.44:309,12,0
chr10	10056125	.	T	TG	7168.65	PASS	AB=0.695;AC=35;AF=0.625;AN=56;BaseQRankSum=0.154;DP=606;FS=3.662;HRun=1;HaplotypeScore=147.4962;InbreedingCoeff=-0.0362;MQ=28.08;MQ0=70;MQRankSum=3.350;QD=13.01;ReadPosRankSum=2.950;VQSLOD=4.3054;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,11:14:24.05:332,24,0	1/1:2,7:9:18.06:250,18,0	0/0:8,0:3:3.01:0,3,39	0/0:9,0:5:13.27:0,13,136	0/0:13,4:15:2.38:0,2,10	0/1:14,11:18:7.66:255,0,8	0/1:10,9:11:17.54:140,0,18	0/1:53,10:41:99:263,0,712	1/1:8,16:15:16.79:351,17,0	1/1:21,18:25:15.89:721,16,0	1/1:6,13:16:13.32:200,13,0	0/1:7,8:11:21.74:218,0,22	1/1:9,19:24:19.43:709,19,0	0/1:9,15:18:45.92:470,0,46	0/1:12,18:23:6.21:551,0,6	0/1:5,7:8:3.33:160,0,3	1/1:9,6:11:2.56:199,3,0	0/1:1,5:6:26.86:121,0,27	0/1:19,2:6:6.95:7,0,99	1/1:7,23:27:14.21:456,14,0	0/1:18,13:20:25.58:105,0,26	1/1:10,11:15:11.99:174,12,0	0/1:8,8:13:35.52:123,0,36	0/1:9,11:14:26.89:84,0,27	0/0:17,1:14:14.90:0,15,130	0/1:24,7:16:7.98:270,0,8	1/1:1,15:13:32.99:485,33,0	1/1:3,11:14:36.12:523,36,0
chr10	10056144	.	T	TG	841.42	PASS	AB=0.835;AC=20;AF=0.357;AN=56;BaseQRankSum=2.759;DP=465;FS=0.644;HRun=1;HaplotypeScore=124.3850;InbreedingCoeff=-0.5138;MQ=26.17;MQ0=53;MQRankSum=-5.152;QD=2.53;ReadPosRankSum=3.489;VQSLOD=-0.2494;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:7,1:7:10.45:10,0,47	0/0:6,0:6:11.22:0,11,93	0/0:19,0:6:16.29:0,16,197	0/0:20,0:8:24.05:0,24,285	0/0:10,2:10:2.92:0,3,17	0/1:20,2:16:22.22:22,0,165	0/1:15,3:11:29.99:30,0,84	0/1:29,4:18:99:139,0,264	0/0:24,1:14:29.87:0,30,318	0/1:20,5:16:77.48:86,0,77	0/1:13,2:15:15.57:65,0,16	0/1:9,3:10:23.45:23,0,88	0/1:7,3:12:42.93:79,0,43	0/1:12,5:16:80.41:80,0,113	0/1:12,10:15:34.21:103,0,34	0/1:5,5:7:50.99:77,0,51	0/1:6,1:5:16.05:65,0,16	0/1:3,0:4:8.36:8,0,66	0/0:10,2:5:6.02:0,6,78	0/1:16,6:19:36.99:37,0,47	0/0:19,4:14:7.54:0,8,70	0/1:13,2:10:3.51:53,0,4	0/1:8,5:12:2.21:11,0,2	0/0:10,1:8:1.44:0,1,57	0/1:17,3:16:50.28:50,0,75	0/1:18,2:11:13.97:14,0,97	0/1:5,3:9:9:9,0,74	0/1:5,2:8:26.85:28,0,27
chr10	10056160	.	GAT	G	133.65	PASS	AB=0.955;AC=14;AF=0.259;AN=54;BaseQRankSum=1.915;DP=321;FS=42.757;HRun=0;HaplotypeScore=96.5559;InbreedingCoeff=-0.1927;MQ=23.14;MQ0=21;MQRankSum=-1.334;QD=0.90;ReadPosRankSum=1.080;VQSLOD=0.0111;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:8,0:7:14.18:14,0,99	./.	0/0:29,0:10:27.09:0,27,513	0/0:31,0:11:33.07:0,33,609	0/0:6,1:7:0:0,0,0	0/1:13,1:10:10.48:10,0,208	0/1:8,2:7:20.77:21,0,55	0/0:20,0:12:33.10:0,33,485	0/0:21,0:12:24.53:0,25,443	0/1:9,0:7:36.76:37,0,130	0/1:8,0:7:2.78:3,0,51	0/1:13,0:12:42.99:43,0,159	0/1:9,1:10:8.59:9,0,208	0/0:12,1:12:2.71:0,3,288	0/1:14,1:12:47.41:47,0,156	0/1:9,1:7:36.57:37,0,41	0/0:6,0:4:5.77:0,6,31	0/0:1,0:1:3.01:0,3,33	0/0:9,0:4:5.92:0,6,43	0/1:16,0:13:7.30:7,0,158	0/1:12,0:6:5.91:6,0,36	0/1:7,0:5:7.85:8,0,9	0/0:6,0:5:5.93:0,6,71	0/0:8,0:7:2.94:0,3,18	1/1:14,1:14:5.24:30,5,0	0/0:9,0:6:11.95:0,12,117	0/0:6,0:5:11.42:0,11,105	0/0:3,0:3:8.97:0,9,110
chr10	10056173	.	ATGGGTGGG	A	303.27	PASS	AB=0.981;AC=17;AF=0.327;AN=52;BaseQRankSum=1.765;DP=313;FS=16.215;HRun=0;HaplotypeScore=100.8453;InbreedingCoeff=-0.0414;MQ=22.54;MQ0=35;MQRankSum=0.267;QD=2.35;ReadPosRankSum=1.205;VQSLOD=0.8748;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:7,1:7:8.98:0,9,108	./.	0/0:31,0:8:18.06:0,18,485	0/0:34,0:9:22.30:0,22,533	0/0:8,1:8:2.57:0,3,16	0/1:10,0:8:30.03:30,0,56	0/1:10,0:7:5.55:6,0,72	0/1:13,0:5:9.97:10,0,182	0/1:20,0:11:22.85:23,0,116	0/0:12,0:9:10.37:0,10,204	0/1:8,0:5:14.68:15,0,56	0/0:14,0:11:1.44:0,1,215	0/1:6,0:6:21.58:22,0,133	0/0:15,0:12:8.58:0,9,214	0/1:10,0:9:24.47:24,0,223	0/0:7,0:5:15.04:0,15,289	0/1:4,1:4:31.86:71,0,32	./.	1/1:11,0:3:3.01:43,3,0	0/0:12,1:11:2.77:0,3,23	1/1:10,0:6:3.01:56,3,0	0/0:13,0:8:12.51:0,13,198	0/0:6,0:4:1.74:0,2,6	1/1:9,1:8:3.01:81,3,0	0/0:13,1:13:19.69:0,20,217	0/1:11,0:8:61.03:61,0,220	1/1:5,0:4:1.55:4,2,0	0/0:4,0:4:7.84:0,8,127
chr10	10056175	.	G	GAT	183.36	PASS	AB=0.859;AC=10;AF=0.200;AN=50;BaseQRankSum=1.613;DP=277;FS=3.572;HRun=0;HaplotypeScore=75.4857;InbreedingCoeff=-0.0199;MQ=22.04;MQ0=34;MQRankSum=0.253;QD=2.70;ReadPosRankSum=1.142;VQSLOD=1.7514;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:4:6.02:0,6,85	./.	0/0:28,0:7:18.06:0,18,293	0/0:34,0:8:24.08:0,24,359	./.	0/1:4,5:7:39.82:51,0,40	0/1:8,1:6:27.31:27,0,60	0/0:11,0:3:8.98:0,9,73	0/1:7,12:11:44.93:172,0,45	0/0:9,0:6:6.31:0,6,181	0/0:7,0:4:2.29:0,2,47	0/1:15,0:12:9.43:9,0,279	0/1:5,0:5:21.81:22,0,134	0/0:10,0:8:15:0,15,176	0/0:9,0:8:14.30:0,14,220	0/0:7,0:5:15.05:0,15,232	0/0:5,0:4:6.63:0,7,50	./.	0/0:11,0:3:5.99:0,6,63	0/0:9,0:7:1:0,1,46	0/0:9,0:5:3.01:0,3,33	0/0:12,0:8:9.43:0,9,112	1/1:5,0:3:2.37:9,2,0	0/0:9,0:7:2.84:0,3,14	0/0:11,1:12:3.99:0,4,238	0/0:10,0:7:18:0,18,232	1/1:3,0:2:2.68:11,3,0	0/1:3,0:3:1.31:1,0,82
chr10	10056177	.	G	GA	49.66	PASS	AB=0.852;AC=13;AF=0.250;AN=52;BaseQRankSum=1.245;DP=275;FS=3.850;HRun=0;HaplotypeScore=73.1294;InbreedingCoeff=0.1479;MQ=22.09;MQ0=33;MQRankSum=0.985;QD=0.67;ReadPosRankSum=1.274;VQSLOD=1.3731;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:4:6.02:0,6,83	./.	0/0:28,0:7:18.06:0,18,251	0/0:33,0:8:23.90:0,24,289	0/1:7,2:8:0:0,0,0	0/1:4,5:7:7.89:8,0,34	0/1:8,1:6:14.38:14,0,51	0/0:10,0:3:8.96:0,9,102	0/1:6,12:10:35.42:106,0,35	0/0:11,0:6:12.04:0,12,166	0/0:7,0:4:3.01:0,3,41	0/0:16,0:13:15.33:0,15,263	0/1:6,0:6:0.89:1,0,107	0/0:9,1:8:19.70:0,20,183	0/0:10,0:9:20.37:0,20,212	0/0:7,0:5:15.05:0,15,208	0/1:4,0:4:8.25:8,0,44	./.	0/0:11,0:2:2.90:0,3,16	0/0:10,0:8:2.82:0,3,42	1/1:8,0:5:2.68:11,3,0	0/0:12,0:8:11.87:0,12,117	1/1:5,0:3:2.37:8,2,0	0/0:9,0:7:2.68:0,3,11	0/0:9,1:10:17.86:0,18,188	0/0:9,0:6:14.98:0,15,181	1/1:3,0:2:2.37:8,2,0	0/1:3,0:3:0.81:1,0,75
chr10	10056202	.	GGAT	G	829.18	PASS	AB=0.962;AC=27;AF=0.482;AN=56;BaseQRankSum=-3.199;DP=388;FS=78.014;HRun=0;HaplotypeScore=158.4195;InbreedingCoeff=-0.2277;MQ=28.26;MQ0=33;MQRankSum=1.506;QD=2.94;ReadPosRankSum=5.353;VQSLOD=-0.7446;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:15,0:13:47.09:76,0,47	1/1:4,0:3:6.01:74,6,0	0/0:23,0:8:19.27:0,19,235	0/0:27,0:9:11.25:0,11,310	1/1:10,0:9:2.51:11,3,0	0/1:11,0:9:7.39:7,0,23	1/1:3,0:2:2.84:14,3,0	0/0:10,0:3:6.02:0,6,101	0/1:19,0:15:47.68:48,0,89	0/1:16,0:12:27.82:28,0,194	1/1:12,0:8:0.72:11,1,0	0/1:27,0:25:87.72:88,0,281	0/1:11,0:10:32.42:32,0,70	0/1:18,0:16:93.48:93,0,121	0/1:20,4:20:35.76:121,0,36	0/1:14,0:11:49.28:49,0,97	0/1:7,1:7:65.10:65,0,66	0/1:5,2:5:32.42:80,0,32	0/0:12,0:6:10.89:0,11,132	0/1:15,0:13:21.63:22,0,27	0/1:24,2:19:8.11:17,0,8	0/1:11,0:7:18.22:18,0,30	0/1:10,0:8:4.25:12,0,4	0/0:13,0:11:1.50:0,2,13	1/1:16,0:15:10.11:78,10,0	0/0:15,0:10:2.85:0,3,177	0/0:6,0:6:7.24:0,7,73	1/1:4,0:4:8.52:43,9,0
chr10	10056205	.	TGATG	T	3148.49	PASS	AB=0.819;AC=34;AF=0.607;AN=56;BaseQRankSum=-2.730;DP=394;FS=29.716;HRun=0;HaplotypeScore=155.7824;InbreedingCoeff=-0.1010;MQ=28.42;MQ0=29;MQRankSum=-0.078;QD=10.43;ReadPosRankSum=5.043;VQSLOD=1.5348;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:16,2:16:46.97:118,0,47	1/1:4,0:4:6.57:77,7,0	0/0:23,0:8:16.29:0,16,276	0/0:24,0:9:13.38:0,13,457	1/1:6,3:8:3.01:50,3,0	1/1:7,2:8:4.57:58,5,0	1/1:1,1:2:3.01:53,3,0	0/0:10,0:3:3.01:0,3,34	0/1:9,8:13:66.93:247,0,67	0/1:12,5:13:99:197,0,117	1/1:11,2:9:1.83:51,2,0	0/1:18,7:25:99:351,0,273	0/1:8,3:10:70.47:152,0,70	0/1:8,9:16:54.25:393,0,54	0/1:16,9:21:33.94:392,0,34	0/1:6,7:11:29.74:305,0,30	0/1:6,1:7:40.89:41,0,128	0/1:6,0:5:1.79:2,0,10	0/1:13,0:7:24.19:24,0,142	1/1:10,4:14:7.31:76,7,0	0/0:24,0:19:0.39:0,0,1	1/1:7,4:9:9.03:143,9,0	1/1:4,5:8:3.35:119,3,0	1/1:10,3:11:0.65:3,1,0	1/1:4,10:15:14.85:259,15,0	0/1:14,1:11:34.76:35,0,208	0/0:5,1:6:6.31:0,6,78	1/1:2,2:4:9.03:160,9,0
chr10	10056213	.	GGAT	G	2027.57	PASS	AB=0.891;AC=35;AF=0.625;AN=56;BaseQRankSum=0.349;DP=430;FS=0.000;HRun=0;HaplotypeScore=165.1579;InbreedingCoeff=-0.3509;MQ=31.11;MQ0=27;MQRankSum=-0.271;QD=5.36;ReadPosRankSum=5.419;VQSLOD=2.5173;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:16,3:17:61.96:69,0,62	0/1:5,0:5:37.60:38,0,44	0/0:21,1:7:18.67:0,19,325	0/0:30,0:11:20.43:0,20,476	0/1:7,3:9:5.70:6,0,33	1/1:9,1:8:5.85:63,6,0	1/1:5,0:3:2.69:14,3,0	1/1:12,0:4:2.60:10,3,0	0/1:13,1:12:76.36:97,0,76	0/1:19,1:15:99:146,0,123	1/1:9,2:9:0.72:10,1,0	0/1:20,5:26:99:376,0,193	1/1:8,2:9:14.60:175,15,0	0/1:21,2:20:99:159,0,119	0/1:24,3:21:68.66:194,0,69	0/1:13,3:13:56.80:209,0,57	0/1:8,1:7:49.43:49,0,58	0/1:5,2:5:21.34:109,0,21	0/1:18,0:10:10.41:10,0,201	1/1:16,1:15:5.30:74,5,0	0/1:24,3:18:34.20:34,0,43	1/1:13,2:13:7.27:32,7,0	0/1:9,1:9:4.58:11,0,5	0/1:12,4:13:41.11:41,0,54	0/1:18,1:17:20.84:91,0,21	0/1:20,0:15:31.33:31,0,184	1/1:4,2:6:8.99:96,9,0	1/1:4,0:4:8.52:43,9,0
chr10	10056227	.	TG	T	1652.99	PASS	AB=0.694;AC=23;AF=0.411;AN=56;BaseQRankSum=9.752;DP=445;FS=112.744;HRun=3;HaplotypeScore=176.0414;InbreedingCoeff=-0.2999;MQ=35.85;MQ0=16;MQRankSum=-3.571;QD=5.26;ReadPosRankSum=4.166;VQSLOD=-0.2309;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:4,12:19:53.46:102,0,53	0/1:2,2:5:57.71:58,0,67	0/0:26,0:10:9.23:0,9,242	0/0:28,0:16:42.11:0,42,541	0/0:6,0:8:2.84:0,3,43	0/1:6,1:6:2.73:3,0,38	0/0:4,1:4:6.02:0,6,85	0/1:8,0:4:0:0,0,0	0/1:13,1:13:32.93:33,0,228	0/1:15,4:18:99:105,0,191	0/0:3,6:10:3.01:0,3,42	0/1:11,12:28:99:342,0,275	0/1:2,5:8:55.87:133,0,56	0/1:14,10:24:99:180,0,341	0/1:12,11:22:87.17:87,0,241	0/1:8,4:13:58.42:58,0,219	0/1:2,6:6:20.75:151,0,21	1/1:1,4:5:10.46:83,10,0	0/1:15,2:10:48.15:48,0,231	0/1:10,7:16:27.82:31,0,28	1/1:8,15:23:6.49:77,6,0	0/0:11,5:17:3.98:0,4,82	0/0:5,2:8:3.91:0,4,67	0/1:5,6:12:0.24:0,0,54	0/0:21,0:18:3.32:0,3,183	0/1:11,10:15:99:209,0,138	1/1:1,2:5:8.24:81,8,0	0/1:3,2:5:24.95:25,0,116
chr10	10056249	.	GGATGGATGGAT	G	3833.50	PASS	AB=0.963;AC=26;AF=0.464;AN=56;BaseQRankSum=0.634;DP=548;FS=3.364;HRun=0;HaplotypeScore=226.8794;InbreedingCoeff=-0.3939;MQ=30.68;MQ0=50;MQRankSum=-0.328;QD=8.69;ReadPosRankSum=1.111;VQSLOD=2.5750;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:26,1:22:43.10:145,0,43	0/1:5,0:5:24.82:40,0,25	0/0:28,0:5:4.57:0,5,104	0/1:36,0:7:2.68:3,0,146	0/0:15,0:12:3.01:0,3,69	0/1:12,0:9:13.87:14,0,26	0/0:8,0:3:6.02:0,6,145	0/1:28,0:13:6.29:6,0,72	0/0:17,0:14:29.12:0,29,506	0/1:22,1:19:99:205,0,227	0/0:13,1:11:2.84:0,3,14	0/1:24,4:28:99:565,0,198	0/1:12,0:10:99:139,0,107	0/1:21,5:25:99:860,0,136	1/1:24,3:22:24.30:627,24,0	0/1:14,3:14:82.21:378,0,82	0/1:10,1:6:78.18:78,0,129	0/1:10,0:8:47.74:52,0,48	0/1:24,0:9:63.15:163,0,63	0/1:24,1:21:81.74:124,0,82	0/1:40,1:28:62.17:63,0,62	0/1:21,0:20:20.94:21,0,26	1/1:5,4:8:1.97:90,2,0	1/1:17,1:15:4.27:37,4,0	0/0:25,0:19:10.61:0,11,169	0/1:27,0:17:29.96:126,0,30	1/1:7,1:7:7.27:81,7,0	0/1:4,0:4:16.68:17,0,19
chr10	10056257	.	GGAT	G	4083.89	PASS	AB=0.931;AC=34;AF=0.607;AN=56;BaseQRankSum=5.807;DP=571;FS=16.170;HRun=0;HaplotypeScore=194.1646;InbreedingCoeff=-0.1747;MQ=27.87;MQ0=63;MQRankSum=-1.431;QD=8.39;ReadPosRankSum=4.008;VQSLOD=2.1374;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:22,6:23:29.49:375,29,0	1/1:5,0:5:8.50:71,9,0	0/1:25,5:8:31.40:31,0,126	0/0:43,0:8:13.89:0,14,168	0/0:17,0:13:3.01:0,3,49	0/1:14,0:10:21.64:60,0,22	0/0:9,0:4:4.43:0,4,32	1/1:32,0:15:15.15:166,15,0	0/1:18,0:14:73.23:73,0,196	0/1:24,0:19:99:231,0,106	0/0:14,1:12:0.89:0,1,2	0/1:22,3:25:24.78:531,0,25	0/1:13,1:11:64.51:199,0,65	0/1:21,6:26:40.02:491,0,40	1/1:22,3:20:22.45:330,22,0	1/1:13,1:12:9.87:181,10,0	0/1:13,0:7:47.30:47,0,57	1/1:9,1:8:19.10:154,19,0	0/1:25,2:8:45.92:134,0,46	0/1:21,2:20:37.68:98,0,38	0/1:38,4:29:55.94:78,0,56	1/1:16,3:19:9.57:78,10,0	0/1:9,1:8:7.07:7,0,15	1/1:14,6:16:11.03:95,11,0	0/1:23,0:18:30.51:31,0,41	0/1:25,5:19:23.85:369,0,24	1/1:9,1:9:14.54:207,15,0	1/1:4,0:3:3.90:46,4,0
chr10	10056260	.	T	TG	4734.37	PASS	AB=0.776;AC=38;AF=0.679;AN=56;BaseQRankSum=4.796;DP=595;FS=16.611;HRun=1;HaplotypeScore=197.0163;InbreedingCoeff=-0.2625;MQ=25.76;MQ0=61;MQRankSum=-1.022;QD=8.97;ReadPosRankSum=2.072;VQSLOD=0.9164;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,14:25:43.84:382,44,0	1/1:3,2:5:3.85:43,4,0	0/1:29,0:8:28.39:28,0,129	0/0:44,2:9:17.48:0,17,169	0/0:17,3:14:3.01:0,3,39	0/1:11,2:9:19.85:60,0,20	0/1:5,5:5:33.79:34,0,66	0/1:25,8:16:29.05:241,0,29	0/1:14,4:15:99:100,0,240	0/1:15,8:19:63.85:287,0,64	0/1:6,8:12:0:0,0,0	1/1:8,12:25:15.62:614,16,0	0/1:9,5:13:61.20:278,0,61	0/1:18,9:27:25.51:464,0,26	1/1:18,6:21:28.48:257,28,0	1/1:8,4:12:0.25:205,0,0	0/1:6,6:7:29.69:68,0,30	1/1:6,4:8:22.82:265,23,0	0/1:25,3:9:29.26:160,0,29	0/1:14,7:20:24.69:126,0,25	0/1:31,11:31:23.32:150,0,23	1/1:11,8:18:4.90:69,5,0	1/1:8,2:8:0.32:36,0,0	1/1:12,8:19:9.43:163,9,0	0/1:22,3:19:88.98:89,0,99	1/1:19,9:21:0.76:371,1,0	1/1:5,5:9:4.66:203,5,0	1/1:4,1:3:3.48:42,3,0
chr10	10056264	.	GGAT	G	1728.01	PASS	AB=0.955;AC=27;AF=0.500;AN=54;BaseQRankSum=-0.961;DP=618;FS=22.379;HRun=0;HaplotypeScore=211.8163;InbreedingCoeff=-0.5345;MQ=25.65;MQ0=57;MQRankSum=2.070;QD=3.47;ReadPosRankSum=-0.145;VQSLOD=0.9182;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:31,0:26:99:213,0,108	1/1:5,0:5:5.37:23,5,0	0/0:31,0:8:7.86:0,8,196	0/0:52,0:7:15.03:0,15,191	./.	1/1:8,5:8:0.64:57,1,0	0/1:9,1:5:43.05:84,0,43	0/1:38,0:19:33.42:33,0,271	0/1:13,5:15:99:206,0,108	0/1:24,0:19:51.75:52,0,210	0/0:15,0:12:0.89:0,1,2	0/1:27,0:26:93.33:93,0,245	0/1:19,0:14:55.02:55,0,212	0/1:32,0:28:99:153,0,240	0/1:25,1:20:12.63:120,0,13	0/1:14,0:13:45.59:104,0,46	0/1:15,0:7:93.43:107,0,93	0/1:11,0:9:81.11:81,0,81	0/1:29,0:10:42.16:42,0,81	0/1:25,0:23:8.99:9,0,100	0/1:38,3:27:46.05:66,0,46	1/1:21,0:19:2.11:7,2,0	1/1:10,0:8:2.27:70,2,0	0/1:22,2:20:2.64:70,0,3	0/1:16,9:20:32.81:171,0,33	0/1:29,0:20:18.79:19,0,167	0/1:9,1:9:36.13:36,0,37	0/0:4,0:2:2.74:0,3,12
chr10	10056298	.	GGAT	G	1291.74	PASS	AB=0.911;AC=19;AF=0.339;AN=56;BaseQRankSum=-0.693;DP=567;FS=1.232;HRun=0;HaplotypeScore=169.2684;InbreedingCoeff=-0.3609;MQ=22.51;MQ0=35;MQRankSum=-0.223;QD=4.06;ReadPosRankSum=-3.061;VQSLOD=2.3750;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:29,2:26:99:113,0,252	1/1:5,1:5:2.88:15,3,0	0/0:44,0:8:14.93:0,15,222	0/0:51,1:11:30:0,30,475	1/1:9,0:5:2.68:11,3,0	0/1:11,1:5:32.80:41,0,33	0/1:12,0:9:16.54:17,0,40	0/1:25,3:18:99:112,0,404	0/0:13,0:7:13.55:0,14,147	0/1:16,3:15:99:154,0,192	0/0:8,2:9:2.88:0,3,29	0/1:22,1:19:99:122,0,332	0/1:19,1:16:99:205,0,232	0/0:27,0:22:3.81:0,4,417	0/1:19,5:16:42.32:42,0,170	0/1:10,2:8:46.58:111,0,47	0/1:17,2:10:82.74:99,0,83	0/1:11,0:11:84.39:150,0,84	0/0:17,0:6:14.54:0,15,214	0/0:19,4:21:7.22:0,7,139	0/1:33,3:28:58.77:59,0,155	0/0:16,1:13:3.23:0,3,40	0/0:14,1:11:3.45:0,3,35	0/1:24,2:22:26.26:26,0,52	0/1:19,1:16:68.49:68,0,176	0/0:23,2:15:12.17:0,12,215	0/1:6,3:8:60.47:99,0,60	0/0:6,0:3:2.74:0,3,12
chr10	10056301	.	T	TG	1321.97	PASS	AB=0.869;AC=20;AF=0.357;AN=56;BaseQRankSum=-0.427;DP=577;FS=4.272;HRun=1;HaplotypeScore=171.3827;InbreedingCoeff=-0.4992;MQ=22.88;MQ0=33;MQRankSum=0.242;QD=3.46;ReadPosRankSum=-2.354;VQSLOD=-0.6228;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:32,2:29:99:151,0,201	1/1:4,0:4:2.94:26,3,0	0/0:41,0:8:14.78:0,15,176	0/0:51,0:10:30:0,30,343	0/0:8,1:7:2.03:0,2,14	0/1:12,0:4:11.03:11,0,33	0/1:13,2:11:23.33:142,0,23	0/1:26,0:16:0.79:1,0,314	0/0:9,1:5:15.04:0,15,182	0/1:19,3:19:99:161,0,197	0/0:8,2:10:2.09:0,2,29	0/1:18,3:18:49.42:49,0,281	0/1:16,3:14:99:137,0,170	0/0:22,2:20:0.96:0,1,342	0/1:23,2:17:65.71:66,0,160	0/1:9,3:8:24.30:100,0,24	0/1:17,5:12:53.12:103,0,53	0/1:10,4:13:52.46:188,0,52	0/1:14,1:6:29.86:30,0,139	0/1:16,7:21:42.24:42,0,102	0/1:30,10:32:91.37:91,0,116	0/0:18,3:16:3.75:0,4,40	0/1:11,1:8:11.01:11,0,20	0/1:21,7:24:40.04:40,0,43	0/0:21,0:17:8.68:0,9,202	0/1:20,3:14:23.62:24,0,175	0/1:9,2:10:58.48:98,0,58	0/0:5,0:3:3:0,3,28
chr10	10056311	.	ATGATGGATGGG	A	4084.36	PASS	AB=0.993;AC=30;AF=0.536;AN=56;BaseQRankSum=1.633;DP=595;FS=4.792;HRun=0;HaplotypeScore=201.3434;InbreedingCoeff=-0.2889;MQ=25.79;MQ0=36;MQRankSum=0.086;QD=8.73;ReadPosRankSum=2.847;VQSLOD=2.4295;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:23:99:321,0,131	0/1:7,0:5:14.28:48,0,14	0/0:44,0:4:10.28:0,10,191	0/0:44,0:12:32.81:0,33,455	1/1:17,0:14:4.48:17,4,0	1/1:11,2:6:11.71:143,12,0	0/1:19,0:15:56.82:57,0,72	0/1:25,0:17:75.60:143,0,76	1/1:10,0:6:17.99:336,18,0	0/1:24,0:20:99:191,0,145	0/1:11,0:10:0.44:40,0,0	1/1:22,2:20:5.70:433,6,0	0/1:21,2:16:14.39:430,0,14	0/1:20,0:16:25.55:298,0,26	0/1:27,0:18:0.74:301,0,1	0/1:11,0:7:15.91:16,0,26	0/1:22,0:14:17.78:18,0,78	0/1:14,0:13:15.92:120,0,16	0/0:12,0:7:14.92:0,15,127	0/0:27,0:25:8.10:0,8,53	0/1:42,0:36:69.12:69,0,177	0/1:21,1:17:3.17:32,0,3	1/1:13,1:12:3.81:57,4,0	0/1:30,0:26:46.51:67,0,47	0/1:22,0:19:14.43:402,0,14	0/1:27,0:15:22.31:276,0,22	0/1:11,0:10:10.31:192,0,10	1/1:4,0:2:3.01:78,3,0
chr10	10056312	.	T	TG	2798.95	PASS	AB=0.756;AC=28;AF=0.500;AN=56;BaseQRankSum=1.603;DP=611;FS=1.079;HRun=1;HaplotypeScore=178.7241;InbreedingCoeff=-0.5029;MQ=25.86;MQ0=39;MQRankSum=-0.330;QD=5.69;ReadPosRankSum=1.562;VQSLOD=0.4984;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:20,10:24:99:154,0,291	0/1:5,2:6:29.84:62,0,30	0/0:44,0:4:12.01:0,12,134	0/0:40,0:12:32.91:0,33,359	1/1:12,6:15:4.04:14,4,0	1/1:12,2:8:4.74:72,5,0	0/1:12,8:16:99:145,0,128	0/1:21,3:16:80.34:80,0,212	0/1:4,6:6:20.55:203,0,21	0/1:20,6:22:99:181,0,285	1/1:9,3:11:3.01:45,3,0	0/1:15,9:20:99:205,0,138	0/1:17,6:16:99:226,0,164	0/1:9,10:15:53.23:219,0,53	0/1:18,9:19:95.77:206,0,96	0/0:9,2:7:14.88:0,15,170	0/0:18,4:14:23.19:0,23,258	0/1:9,5:13:99:185,0,123	0/1:10,1:6:9.93:10,0,122	0/1:24,4:26:30.60:31,0,71	0/1:23,20:36:99:124,0,247	0/1:19,4:18:8.80:9,0,30	0/1:12,4:14:11.08:81,0,11	0/1:18,12:26:50.46:50,0,62	0/1:10,13:19:99:189,0,127	0/1:15,13:15:79.23:279,0,79	0/1:12,3:14:54.72:146,0,55	1/1:2,2:2:3.01:44,3,0
chr10	10056474	.	T	TA	5653	PASS	AB=0.719;AC=23;AF=0.411;AN=56;BaseQRankSum=-6.583;DP=869;FS=6.788;HRun=1;HaplotypeScore=253.6057;InbreedingCoeff=-0.7178;MQ=31.07;MQ0=37;MQRankSum=0.024;QD=8.06;ReadPosRankSum=-3.047;VQSLOD=0.7630;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:19,11:27:99:300,0,288	0/1:9,3:12:99:154,0,129	0/0:33,0:11:26.74:0,27,312	0/0:48,0:21:38.33:0,38,628	0/1:10,18:24:32.04:130,0,32	0/1:18,7:24:99:188,0,226	0/1:10,9:16:63.50:222,0,63	0/0:50,1:31:16.19:0,16,682	0/1:16,18:31:99:493,0,207	0/1:37,15:42:99:418,0,488	0/0:11,8:12:4.25:0,4,45	0/1:24,6:26:99:159,0,481	0/1:20,11:26:99:400,0,295	0/1:28,11:35:99:352,0,463	0/1:26,9:31:99:211,0,227	0/1:19,8:26:99:331,0,295	0/1:10,12:22:99:406,0,261	0/1:6,8:14:57.88:218,0,58	0/0:12,1:5:9.03:0,9,126	0/1:16,14:28:56.18:226,0,56	0/1:22,20:38:99:115,0,224	0/1:25,9:27:99:137,0,123	0/1:8,7:13:23.53:147,0,24	0/1:13,12:24:73:226,0,73	0/1:25,20:41:99:290,0,224	0/1:36,16:39:99:413,0,525	0/1:20,3:21:62.47:62,0,358	0/1:6,3:8:52.80:53,0,90
chr10	10056481	.	TG	T	2814.75	PASS	AB=0.851;AC=22;AF=0.393;AN=56;BaseQRankSum=9.715;DP=789;FS=1.365;HRun=3;HaplotypeScore=244.5033;InbreedingCoeff=-0.5616;MQ=32.33;MQ0=19;MQRankSum=-4.313;QD=5.08;ReadPosRankSum=2.600;VQSLOD=0.2217;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:24,2:23:99:122,0,185	0/1:10,3:12:67.30:97,0,67	0/0:35,0:15:39.04:0,39,494	0/0:44,4:26:47.09:0,47,845	0/0:22,0:19:3.13:0,3,43	0/1:17,6:20:83.69:215,0,84	0/1:15,2:12:99:106,0,104	0/0:48,5:35:10.07:0,10,734	0/1:22,11:29:99:286,0,120	0/1:50,0:40:71.28:71,0,527	0/1:16,2:13:46.70:47,0,58	0/1:18,11:24:99:280,0,276	0/1:17,12:26:99:350,0,104	0/1:25,11:32:99:297,0,286	0/1:25,5:29:99:223,0,208	0/1:18,11:27:99:288,0,241	0/1:20,1:21:40.14:40,0,274	0/1:8,0:8:27.27:29,0,27	0/0:12,0:7:15.05:0,15,215	0/1:25,2:25:55.78:124,0,56	0/0:36,1:30:17.25:0,17,253	0/1:25,3:22:26.34:26,0,79	1/1:10,2:10:3.53:69,4,0	0/0:16,5:20:5.76:0,6,124	0/1:41,2:41:90.73:91,0,278	0/1:40,3:29:99:122,0,376	0/1:17,3:19:60.66:61,0,337	0/1:5,1:6:28.81:29,0,74
chr10	10056482	.	G	GAT	1505.67	PASS	AB=0.979;AC=19;AF=0.339;AN=56;BaseQRankSum=10.187;DP=795;FS=5.793;HRun=0;HaplotypeScore=270.3404;InbreedingCoeff=-0.3900;MQ=32.29;MQ0=18;MQRankSum=-2.757;QD=2.96;ReadPosRankSum=0.625;VQSLOD=1.6836;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:25,1:23:15.73:16,0,385	0/0:14,0:13:14.71:0,15,139	0/0:34,0:15:39.13:0,39,577	0/0:47,0:26:74.32:0,74,1014	0/1:23,0:19:8.42:8,0,80	0/1:21,1:20:99:104,0,257	0/1:16,1:12:44.21:44,0,181	0/1:58,0:35:46.41:46,0,864	0/1:33,0:30:99:154,0,303	0/0:49,0:39:40.40:0,40,865	0/1:20,0:13:68:68,0,75	0/1:30,0:25:99:116,0,421	0/1:30,1:28:99:311,0,195	0/1:37,1:34:99:227,0,495	0/1:35,1:30:99:194,0,302	0/1:30,0:28:95.98:96,0,436	0/0:19,1:19:43.25:0,43,538	0/0:7,0:8:8.66:0,9,104	0/0:13,0:7:15.05:0,15,237	0/1:27,1:26:73.39:73,0,140	0/0:35,0:28:21.09:0,21,301	0/1:28,1:23:22.74:23,0,148	1/1:12,0:10:3.93:69,4,0	0/0:20,0:19:5.93:0,6,131	0/1:47,0:42:79.10:79,0,423	0/0:43,0:29:6.28:0,6,611	0/1:21,0:19:32.91:33,0,400	0/1:6,0:6:2.29:2,0,114
chr10	10056484	.	GA	G	2069.66	PASS	AB=0.874;AC=23;AF=0.411;AN=56;BaseQRankSum=7.720;DP=744;FS=0.415;HRun=1;HaplotypeScore=249.6912;InbreedingCoeff=-0.5542;MQ=32.68;MQ0=13;MQRankSum=-3.452;QD=3.80;ReadPosRankSum=2.819;VQSLOD=-0.0158;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:19,5:21:99:154,0,234	0/1:12,1:12:88.40:96,0,88	0/0:36,0:16:38.67:0,39,531	0/0:43,3:26:36.46:0,36,989	0/1:12,9:17:17.34:17,0,43	0/1:20,3:20:99:162,0,136	0/1:13,2:11:69.77:70,0,149	0/0:55,0:35:57.79:0,58,959	0/1:24,5:26:99:181,0,126	0/1:39,8:36:99:140,0,702	0/1:13,4:12:7.49:7,0,89	0/1:26,2:24:99:151,0,309	0/1:29,1:27:99:175,0,145	0/1:35,1:32:99:168,0,349	0/1:33,2:30:65.10:65,0,263	0/1:28,2:29:99:182,0,269	0/1:14,5:18:99:123,0,230	0/1:6,1:7:16.86:43,0,17	0/0:11,2:9:20.62:0,21,268	0/1:16,11:25:76.94:164,0,77	0/0:23,7:25:17.45:0,17,279	0/1:27,1:22:39.48:39,0,85	1/1:7,3:8:5.22:41,5,0	0/0:17,2:18:15.54:0,16,159	0/1:32,10:37:32.51:33,0,322	0/1:31,7:27:99:179,0,515	0/1:20,0:18:6.69:7,0,379	0/1:5,1:6:32.79:33,0,87
chr10	10056488	.	GATGA	G	1716.53	PASS	AB=0.987;AC=23;AF=0.411;AN=56;BaseQRankSum=7.503;DP=715;FS=4.505;HRun=0;HaplotypeScore=266.8088;InbreedingCoeff=-0.5083;MQ=34.41;MQ0=11;MQRankSum=-2.179;QD=3.43;ReadPosRankSum=-0.807;VQSLOD=2.2873;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:21:35.07:35,0,318	0/0:12,0:11:0.31:0,0,183	0/0:34,0:15:16.25:0,16,475	0/0:42,0:27:33.73:0,34,1146	0/1:22,0:17:3.17:3,0,76	0/1:22,1:20:99:173,0,102	0/1:16,0:13:88.43:88,0,157	0/1:52,1:36:63.23:63,0,1247	0/1:28,0:26:99:141,0,149	0/0:47,0:37:30.93:0,31,999	0/1:17,0:13:37.22:37,0,60	0/1:27,0:23:99:134,0,357	0/1:27,1:25:99:178,0,121	0/1:32,0:28:99:140,0,504	0/1:33,0:28:99:140,0,283	0/1:29,0:28:99:228,0,382	0/1:15,3:17:99:141,0,272	1/1:5,1:6:2.74:57,3,0	0/1:14,0:10:17.43:17,0,334	0/1:27,0:25:31.85:32,0,131	0/0:24,3:22:7.47:0,7,224	0/1:28,0:22:85.61:86,0,86	1/1:9,0:7:5.68:46,6,0	0/0:15,1:15:0.37:0,0,177	0/1:40,0:35:99:105,0,344	0/0:36,0:26:1.76:0,2,659	0/1:20,0:18:17.73:18,0,657	0/1:6,0:6:6.55:7,0,138
chr10	10056495	.	GGAT	G	4357.13	PASS	AB=0.930;AC=25;AF=0.446;AN=56;BaseQRankSum=5.891;DP=700;FS=8.296;HRun=0;HaplotypeScore=255.6006;InbreedingCoeff=-0.8043;MQ=34.78;MQ0=9;MQRankSum=-2.549;QD=7.03;ReadPosRankSum=-0.436;VQSLOD=2.8579;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:20,1:19:59.16:59,0,303	0/0:12,0:11:7.38:0,7,175	0/0:33,0:13:20.65:0,21,360	0/0:35,0:24:30.39:0,30,705	0/1:20,1:16:27.65:28,0,33	0/1:18,5:20:80.40:343,0,80	0/1:15,1:14:99:242,0,169	0/1:53,0:36:99:144,0,813	0/1:21,8:28:99:506,0,125	0/1:47,1:38:30.19:30,0,790	0/1:18,0:14:86.58:87,0,97	0/1:18,10:24:99:452,0,191	0/1:20,7:24:39.84:499,0,40	0/1:23,7:26:99:370,0,321	0/1:33,0:28:99:266,0,208	0/1:29,0:28:99:424,0,259	0/1:18,0:17:59.87:60,0,265	0/1:6,0:6:14.36:56,0,14	0/1:13,0:10:42.94:43,0,208	0/1:29,0:27:99:126,0,177	0/1:24,0:19:13.65:14,0,104	0/1:25,3:22:86.28:136,0,86	0/1:7,2:7:26.88:88,0,27	0/1:12,3:14:17.19:17,0,88	0/1:34,3:32:99:211,0,240	0/1:37,0:27:41.27:41,0,535	0/1:22,0:20:99:107,0,501	0/1:6,0:6:10.48:10,0,91
chr10	10056498	.	T	TG	5111.69	PASS	AB=0.862;AC=26;AF=0.464;AN=56;BaseQRankSum=6.702;DP=724;FS=3.404;HRun=1;HaplotypeScore=264.2364;InbreedingCoeff=-0.8456;MQ=35.17;MQ0=9;MQRankSum=-5.486;QD=7.78;ReadPosRankSum=1.132;VQSLOD=2.1835;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:20,3:21:76.24:76,0,287	0/1:12,1:12:38.65:39,0,126	0/0:30,1:12:20.71:0,21,332	0/0:35,0:24:34.73:0,35,580	0/1:21,1:17:18.79:19,0,33	0/1:18,5:20:78.30:245,0,78	0/1:11,6:15:99:274,0,138	0/1:46,9:38:99:257,0,559	0/1:22,9:31:99:514,0,130	0/1:45,3:40:99:116,0,621	0/1:14,4:14:92.24:115,0,92	0/1:26,4:26:99:370,0,154	0/1:20,8:25:47.82:555,0,48	0/1:30,4:30:99:428,0,312	0/1:23,9:28:99:401,0,127	0/1:19,11:29:99:532,0,165	0/1:17,3:20:87.75:88,0,195	0/1:3,2:6:11.01:94,0,11	0/1:11,2:11:99:107,0,193	0/1:22,5:26:99:213,0,126	0/1:22,2:19:33.16:33,0,104	0/1:27,3:24:78.52:108,0,79	0/1:10,0:8:25.40:43,0,25	0/1:14,2:15:44.67:45,0,87	0/1:34,3:32:99:185,0,159	0/1:34,3:28:88.94:89,0,479	0/1:19,3:21:99:161,0,264	0/1:6,0:6:5.17:5,0,101
chr10	10056517	.	T	TAGGTG	10734.39	PASS	AB=0.946;AC=26;AF=0.464;AN=56;BaseQRankSum=-5.416;DP=688;FS=0.733;HRun=0;HaplotypeScore=322.7437;InbreedingCoeff=-0.7183;MQ=49.93;MQ0=5;MQRankSum=-2.589;QD=17.71;ReadPosRankSum=-0.591;VQSLOD=3.8369;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:23:99:286,0,155	0/1:9,0:9:55.01:55,0,82	0/0:28,0:16:41.26:0,41,755	0/0:27,0:22:59.23:0,59,1177	0/1:13,1:15:6.23:210,0,6	0/1:22,0:22:99:359,0,404	0/1:18,0:18:99:373,0,240	0/1:56,0:42:99:555,0,1065	0/1:26,4:33:99:742,0,429	0/1:33,2:33:99:551,0,575	0/1:17,0:16:39.39:39,0,170	0/1:28,3:28:99:796,0,419	0/1:27,2:29:99:686,0,280	0/1:29,2:30:99:664,0,488	0/1:21,3:24:71.91:868,0,72	0/1:29,3:31:99:927,0,215	0/1:19,2:23:99:584,0,347	0/1:12,0:12:25.43:263,0,25	0/1:12,0:11:99:327,0,165	0/1:30,1:30:99:447,0,302	0/0:24,0:25:16.62:0,17,148	0/1:26,0:25:99:245,0,269	0/1:7,0:7:11:11,0,112	0/1:19,2:20:21.42:360,0,21	0/1:17,1:16:99:226,0,101	0/1:30,2:26:99:619,0,268	0/1:22,1:23:99:436,0,303	1/1:4,0:5:6.46:104,6,0
chr10	10056537	.	GA	G	216.99	PASS	AB=0.826;AC=5;AF=0.089;AN=56;BaseQRankSum=9.331;DP=633;FS=117.094;HRun=2;HaplotypeScore=300.6368;InbreedingCoeff=-0.0995;MQ=59.77;MQ0=0;MQRankSum=-6.897;QD=1.94;ReadPosRankSum=2.011;VQSLOD=0.4485;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:19,4:21:33.77:34,0,571	0/0:5,0:5:15.05:0,15,222	0/0:24,0:22:63.09:0,63,843	0/0:31,0:27:75.37:0,75,1068	0/0:17,0:16:37.14:0,37,484	0/0:18,2:20:24.46:0,24,689	0/0:27,0:27:75.21:0,75,1091	0/0:32,1:30:37.32:0,37,1004	0/1:26,5:31:16.51:17,0,992	0/0:26,1:26:27.77:0,28,936	0/0:16,0:15:36.02:0,36,490	0/0:31,1:29:49.77:0,50,958	0/0:26,2:27:31.34:0,31,787	0/0:34,1:33:20.79:0,21,974	0/0:26,0:24:51.25:0,51,868	0/0:35,1:35:79.98:0,80,1246	0/1:15,7:22:99:145,0,475	0/1:10,4:14:45.20:45,0,327	0/0:12,0:12:36.09:0,36,504	0/0:23,0:22:51.10:0,51,735	0/0:31,5:34:20.44:0,20,276	0/0:21,0:20:47.48:0,47,648	0/0:10,0:9:24.02:0,24,307	0/0:20,1:21:39.37:0,39,543	0/0:14,0:12:33.11:0,33,487	0/1:19,3:20:93.19:93,0,572	0/0:20,0:20:57.02:0,57,789	0/0:7,0:7:15.05:0,15,225
chr10	10058020	.	G	GTGT	18893.21	PASS	AB=0.635;AC=38;AF=0.679;AN=56;BaseQRankSum=-14.322;DP=875;FS=0.821;HRun=0;HaplotypeScore=104.2464;InbreedingCoeff=0.6729;MQ=62.02;MQ0=22;MQRankSum=1.704;QD=28.67;ReadPosRankSum=4.062;VQSLOD=5.1633;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,26:36:24.41:1211,24,0	1/1:5,6:12:12.04:236,12,0	0/0:40,0:25:9.03:0,9,123	0/0:41,0:25:13.28:0,13,149	0/0:31,0:32:69.18:0,69,900	0/0:28,0:28:60.19:0,60,798	0/0:14,0:14:17.18:0,17,239	1/1:31,10:41:21.54:304,22,0	0/0:36,0:37:75.68:0,76,988	0/1:21,28:51:99:1517,0,130	0/1:13,12:26:1.77:668,0,2	1/1:12,22:34:63.22:1233,63,0	1/1:8,19:27:54.17:1026,54,0	1/1:10,19:31:39.13:766,39,0	1/1:7,21:29:16.30:1020,16,0	1/1:11,20:31:20.70:1021,21,0	1/1:7,19:26:10.27:902,10,0	0/1:10,15:24:55.16:606,0,55	1/1:24,8:31:30.07:500,30,0	1/1:12,29:41:72.20:1364,72,0	1/1:12,25:37:51.18:1002,51,0	1/1:5,23:29:57.20:1117,57,0	1/1:7,16:21:48.16:935,48,0	1/1:9,16:25:33.11:648,33,0	0/0:23,0:24:48.12:0,48,630	1/1:15,25:40:40.32:1422,40,0	1/1:12,27:39:57.19:1120,57,0	0/1:6,9:15:17.82:276,0,18
chr10	10058714	.	TACACAC	T	7051.94	PASS	AB=0.618;AC=44;AF=0.786;AN=56;BaseQRankSum=-2.266;DP=707;FS=14.393;HRun=0;HaplotypeScore=181.6431;InbreedingCoeff=0.5993;MQ=51.41;MQ0=16;MQRankSum=-3.187;QD=12.99;ReadPosRankSum=1.206;VQSLOD=3.0172;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:16,23:39:12.69:199,0,13	1/1:1,7:8:3.95:64,4,0	0/0:32,0:11:9.03:0,9,135	0/0:45,0:12:3.01:0,3,44	0/1:7,0:19:0:0,0,0	0/0:11,0:20:18.06:0,18,386	0/0:17,0:36:29.99:0,30,562	1/1:11,14:25:36.02:559,36,0	0/0:19,0:26:40.72:0,41,862	1/1:16,16:32:43.23:709,43,0	1/1:2,12:14:9.03:168,9,0	1/1:7,15:23:32.73:538,33,0	1/1:9,12:21:24.08:431,24,0	1/1:3,24:28:30.10:572,30,0	1/1:9,10:20:0.44:284,0,0	1/1:6,17:23:18.06:322,18,0	1/1:13,13:26:2.99:63,3,0	1/1:8,9:17:12:179,12,0	1/1:12,8:19:22.07:276,22,0	1/1:5,16:23:9.40:162,9,0	1/1:13,26:37:6.01:100,6,0	1/1:9,26:37:25.23:422,25,0	1/1:6,18:25:12.64:233,13,0	1/1:13,17:30:2.68:54,3,0	1/1:4,0:14:9.03:125,9,0	1/1:7,21:28:60.06:1019,60,0	1/1:5,17:21:27.02:511,27,0	1/1:1,5:6:3.01:63,3,0
chr10	10059505	.	A	AT	8901.71	PASS	AB=0.767;AC=41;AF=0.732;AN=56;BaseQRankSum=-9.282;DP=502;FS=2.855;HRun=10;HaplotypeScore=56.9487;InbreedingCoeff=0.5684;MQ=83.75;MQ0=0;MQRankSum=-1.684;QD=20.75;ReadPosRankSum=2.532;VQSLOD=5.9459;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,35:39:78.34:1002,78,0	1/1:0,6:6:15.04:158,15,0	0/0:22,0:19:16.22:0,16,146	0/1:22,0:18:20.64:21,0,41	0/0:13,0:13:32.89:0,33,262	0/1:18,0:18:2.55:3,0,272	0/0:12,1:13:6.95:0,7,260	1/1:6,22:28:60.09:611,60,0	0/0:19,0:19:47.94:0,48,394	1/1:1,17:19:54:555,54,0	1/1:4,16:20:23.39:437,23,0	1/1:3,11:14:24.06:256,24,0	0/1:4,9:15:2.91:181,0,3	1/1:4,11:15:23.89:256,24,0	0/1:4,10:14:4.24:255,0,4	1/1:1,15:16:36.09:384,36,0	1/1:4,19:23:48.12:511,48,0	1/1:3,21:24:63.16:671,63,0	1/1:5,19:24:38.49:595,38,0	1/1:6,14:20:44.90:456,45,0	0/1:7,8:15:18.98:226,0,19	1/1:2,13:15:42.10:441,42,0	1/1:3,14:17:36.09:383,36,0	1/1:0,11:12:32.92:334,33,0	0/0:6,0:6:2.97:0,3,25	1/1:6,6:13:21.01:211,21,0	1/1:1,23:24:57.14:607,57,0	1/1:0,14:16:35.76:348,36,0
chr10	10059839	.	TTTTCTTTC	T	5544.01	PASS	AB=0.599;AC=50;AF=0.926;AN=54;BaseQRankSum=-0.880;DP=374;FS=4.971;HRun=0;HaplotypeScore=98.3093;InbreedingCoeff=0.0262;MQ=59.41;MQ0=2;MQRankSum=-1.007;QD=15.84;ReadPosRankSum=-0.936;VQSLOD=3.3239;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:12,6:18:6.02:137,6,0	1/1:2,7:9:15.05:281,15,0	./.	0/0:13,0:11:0.47:0,0,1	1/1:2,0:14:21.07:350,21,0	1/1:14,0:14:6.02:98,6,0	1/1:15,0:15:4.61:59,5,0	1/1:20,0:20:5.96:45,6,0	1/1:16,0:16:9.03:151,9,0	1/1:4,7:11:14.97:208,15,0	1/1:4,11:14:18.06:369,18,0	1/1:6,9:15:12.04:300,12,0	1/1:5,5:10:6.02:143,6,0	1/1:4,8:12:9.03:210,9,0	1/1:6,6:12:9.03:213,9,0	1/1:3,12:15:21.07:509,21,0	0/1:9,8:17:1.33:65,0,1	1/1:7,5:12:3.01:74,3,0	1/1:11,0:14:6.01:85,6,0	1/1:5,0:19:18.04:279,18,0	1/1:6,0:6:3.01:34,3,0	1/1:2,11:13:15.05:335,15,0	1/1:7,6:13:2.87:66,3,0	1/1:2,4:6:5.98:150,6,0	1/1:1,0:10:15.04:230,15,0	1/1:7,8:15:24.07:443,24,0	1/1:3,11:14:21.07:516,21,0	0/1:1,13:14:25.77:196,0,26
chr10	10059869	.	TTCTTTCTTTCTTTCTA	T	2570.74	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=-1.808;DP=337;FS=4.690;HRun=0;HaplotypeScore=131.0102;InbreedingCoeff=0.0679;MQ=49.94;MQ0=9;MQRankSum=-2.441;QD=12.42;ReadPosRankSum=2.196;VQSLOD=2.3323;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:2.67:0,3,124	0/0:9,0:9:8.99:0,9,234	0/0:10,0:3:5.88:0,6,36	0/0:6,0:2:2.98:0,3,22	0/1:19,0:19:99:557,0,240	1/1:1,14:15:6.02:267,6,0	1/1:14,0:14:35:464,35,0	0/1:23,0:12:72.64:144,0,73	1/1:0,15:15:9.03:399,9,0	0/1:8,0:8:2.62:3,0,146	0/0:14,0:14:9.53:0,10,382	0/0:9,0:9:12.01:0,12,138	0/1:11,0:11:2.53:3,0,257	1/1:8,0:8:4.70:51,5,0	0/1:9,0:9:39.67:40,0,125	0/0:14,0:14:27.04:0,27,363	0/1:11,0:11:26.71:27,0,60	0/0:7,0:7:8.60:0,9,102	0/1:8,0:6:73.06:153,0,73	0/1:17,0:17:66.33:272,0,66	1/1:9,0:9:14.79:144,15,0	0/0:12,0:12:25.77:0,26,241	0/0:10,0:10:11.92:0,12,124	0/0:8,0:8:15.01:0,15,287	0/1:15,0:15:99:181,0,137	0/1:13,0:13:21.25:21,0,422	0/1:12,0:12:17.08:17,0,161	0/0:17,0:16:18.04:0,18,299
chr10	10060053	.	CT	C	6293.54	PASS	AB=0.821;AC=54;AF=0.964;AN=56;BaseQRankSum=-4.401;DP=216;FS=2.003;HRun=2;HaplotypeScore=34.3900;InbreedingCoeff=0.0076;MQ=75.97;MQ0=0;MQRankSum=-3.589;QD=29.14;ReadPosRankSum=1.829;VQSLOD=4.3919;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,15:17:42:520,42,0	1/1:0,2:2:6.02:78,6,0	0/1:5,1:6:9.35:9,0,83	0/1:8,3:9:62.52:101,0,63	1/1:0,13:12:27.09:350,27,0	1/1:0,3:3:9.03:117,9,0	1/1:1,12:13:27.09:349,27,0	1/1:0,6:6:18.06:234,18,0	1/1:3,3:6:12.04:152,12,0	1/1:0,5:5:15.05:195,15,0	1/1:0,11:11:27.09:350,27,0	1/1:0,4:4:12.04:153,12,0	1/1:0,4:4:12.04:156,12,0	1/1:1,6:7:18.06:229,18,0	1/1:0,5:5:15.05:195,15,0	1/1:0,9:9:24.08:311,24,0	1/1:0,7:7:9.03:117,9,0	1/1:1,5:7:15.01:172,15,0	1/1:1,8:9:21.05:256,21,0	1/1:0,6:6:15.05:195,15,0	1/1:1,19:20:45.15:583,45,0	1/1:0,2:2:6.02:78,6,0	1/1:0,6:6:15.05:194,15,0	1/1:1,7:8:18.06:233,18,0	1/1:0,10:10:27.09:347,27,0	1/1:1,5:6:15.05:195,15,0	1/1:0,9:9:21.07:271,21,0	1/1:2,2:4:12.04:155,12,0
chr10	10060055	.	TC	T	2120.47	PASS	AB=0.982;AC=47;AF=0.839;AN=56;BaseQRankSum=-2.107;DP=228;FS=6.838;HRun=4;HaplotypeScore=52.1276;InbreedingCoeff=0.0438;MQ=76.26;MQ0=0;MQRankSum=-1.454;QD=9.59;ReadPosRankSum=4.146;VQSLOD=0.2731;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:15,2:17:40.68:248,41,0	1/1:2,0:2:5.72:29,6,0	0/0:7,0:7:7.84:0,8,72	0/1:11,0:9:13.20:13,0,75	1/1:13,0:12:25.76:131,26,0	1/1:3,0:3:8.64:46,9,0	1/1:14,0:14:5.11:127,5,0	0/1:8,0:8:0.59:51,0,1	0/1:6,0:6:20.33:60,0,20	1/1:6,0:5:13.21:53,13,0	1/1:12,0:12:25.74:131,26,0	0/1:5,0:5:11.30:57,0,11	0/1:6,0:6:5.56:42,0,6	1/1:7,0:7:16.94:86,17,0	0/1:6,0:6:2.72:54,0,3	1/1:9,0:9:22.99:122,23,0	1/1:7,0:7:8.44:40,8,0	1/1:6,1:7:11.55:62,12,0	1/1:8,0:8:15.90:76,16,0	1/1:6,0:6:14.34:76,14,0	1/1:19,1:20:42.84:226,43,0	1/1:2,0:2:5.75:30,6,0	1/1:7,0:7:14.20:73,14,0	1/1:8,0:8:17.33:100,17,0	1/1:10,0:10:25.56:131,26,0	0/1:6,1:7:3.19:47,0,3	1/1:10,0:10:1.80:79,2,0	1/1:4,0:4:11.40:58,11,0
chr10	10060063	.	T	TC	175.26	PASS	AB=0.918;AC=8;AF=0.143;AN=56;BaseQRankSum=0.061;DP=244;FS=0.000;HRun=10;HaplotypeScore=63.3654;InbreedingCoeff=0.3652;MQ=76.61;MQ0=0;MQRankSum=-2.281;QD=4.17;ReadPosRankSum=-1.783;VQSLOD=-0.1824;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,1:18:26.90:0,27,217	0/0:3,0:3:5.99:0,6,49	0/0:6,0:7:7.25:0,7,33	0/1:9,1:10:13.98:50,0,14	0/0:11,0:12:16.51:0,17,127	1/1:4,0:4:3:25,3,0	0/1:9,4:13:3.63:152,0,4	0/0:7,0:7:5.97:0,6,49	1/1:4,3:7:6.01:62,6,0	0/0:7,0:6:11.97:0,12,98	0/0:12,0:12:4.90:0,5,58	0/0:6,0:6:2.93:0,3,24	0/0:6,0:6:5.96:0,6,49	0/0:6,0:7:4.98:0,5,30	0/0:7,0:7:14.95:0,15,123	0/0:10,0:10:16.97:0,17,129	0/0:10,0:11:14.98:0,15,123	0/0:6,0:7:10.99:0,11,80	0/0:8,0:9:14.01:0,14,104	0/1:6,0:6:0:0,0,0	0/0:23,0:23:41.90:0,42,341	0/1:2,0:2:0:0,0,0	0/0:9,0:9:5.94:0,6,48	0/0:9,0:10:17:0,17,125	0/0:9,0:9:14.96:0,15,123	0/0:8,0:8:8.97:0,9,74	0/0:10,0:10:14:0,14,105	0/0:2,0:2:5.99:0,6,49
chr10	10065371	.	A	AT	3732.55	PASS	AB=0.920;AC=11;AF=0.196;AN=56;BaseQRankSum=-12.655;DP=682;FS=1.788;HRun=6;HaplotypeScore=60.4543;InbreedingCoeff=0.8889;MQ=77.02;MQ0=0;MQRankSum=-1.715;QD=26.85;ReadPosRankSum=2.092;VQSLOD=4.1205;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,120,1209	0/0:8,0:8:21.03:0,21,207	0/0:20,0:20:48.07:0,48,475	0/0:19,0:19:36.07:0,36,364	1/1:1,25:26:69.18:850,69,0	1/1:0,18:18:51.16:642,51,0	1/1:5,18:23:45.14:565,45,0	0/0:27,0:27:72.16:0,72,734	1/1:3,17:20:45.14:566,45,0	0/0:29,0:29:81.18:0,81,826	0/0:21,0:21:54.12:0,54,551	0/0:24,0:24:54.11:0,54,551	0/0:23,0:23:57.12:0,57,581	0/0:27,0:27:66.14:0,66,673	0/0:41,0:41:99:0,105,1071	0/1:21,2:23:15.35:15,0,491	0/0:31,0:31:90.19:0,90,912	0/0:14,0:14:36.08:0,36,367	0/0:23,0:23:51.08:0,51,510	0/0:24,0:24:69.16:0,69,704	0/0:28,0:28:81.17:0,81,819	0/0:26,0:26:78.15:0,78,783	0/0:18,0:18:51.12:0,51,520	0/0:31,0:31:87.16:0,87,877	1/1:0,29:29:87.28:1094,87,0	0/0:22,0:22:57.12:0,57,576	0/0:32,0:31:93.17:0,93,938	0/0:10,0:10:30.07:0,30,306
chr10	10066294	.	T	TACACAC	5391.02	PASS	AB=0.646;AC=44;AF=0.880;AN=50;BaseQRankSum=-3.811;DP=638;FS=9.004;HRun=0;HaplotypeScore=181.2664;InbreedingCoeff=0.4538;MQ=65.49;MQ0=13;MQRankSum=-1.546;QD=10.37;ReadPosRankSum=-1.821;VQSLOD=2.8749;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:40,0:40:14.54:251,15,0	1/1:5,6:13:8.74:231,9,0	1/1:38,0:26:2.24:5,2,0	./.	0/0:15,0:26:11.94:0,12,167	1/1:16,0:23:2.76:78,3,0	1/1:20,0:20:9.03:145,9,0	1/1:19,0:18:9.42:83,9,0	1/1:19,0:18:18.04:416,18,0	1/1:21,7:28:36.11:847,36,0	0/1:12,8:23:0:0,0,1	./.	1/1:16,1:19:12.04:327,12,0	1/1:24,0:24:12.04:324,12,0	1/1:8,7:17:5.16:191,5,0	1/1:14,1:22:9.03:235,9,0	1/1:12,0:19:11.99:206,12,0	1/1:6,6:15:3.01:96,3,0	1/1:14,0:15:12.47:174,12,0	0/1:9,1:24:38.68:126,0,39	1/1:15,0:25:8.34:113,8,0	./.	1/1:19,0:19:11.89:183,12,0	1/1:31,0:32:24.08:531,24,0	0/0:14,0:27:24.08:0,24,335	1/1:27,0:27:35.13:634,35,0	1/1:18,4:27:8.27:174,8,0	1/1:8,0:8:2.99:23,3,0
chr10	10066316	.	C	CACACACAC	4048.24	PASS	AB=1.000;AC=42;AF=0.840;AN=50;BaseQRankSum=-5.204;DP=667;FS=11.202;HRun=0;HaplotypeScore=172.2389;InbreedingCoeff=0.3031;MQ=50.74;MQ0=19;MQRankSum=-1.786;QD=7.46;ReadPosRankSum=-4.285;VQSLOD=0.5994;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:42,0:42:15.50:275,16,0	1/1:14,0:13:8.51:152,9,0	1/1:35,0:16:2.24:6,2,0	./.	0/0:22,0:22:11.64:0,12,223	1/1:25,0:25:3.01:122,3,0	1/1:19,0:19:9.03:145,9,0	1/1:25,0:24:9.23:57,9,0	1/1:20,0:19:9.01:182,9,0	1/1:23,0:22:24.06:459,24,0	0/1:27,0:27:0.12:0,0,0	./.	1/1:20,0:20:12.02:426,12,0	1/1:22,5:27:2.70:121,3,0	0/1:20,0:19:6.81:121,0,7	1/1:21,0:21:9.03:202,9,0	1/1:21,0:21:6.02:93,6,0	1/1:20,0:19:3.01:64,3,0	1/1:15,0:14:11.83:149,12,0	0/1:27,0:27:38.46:80,0,38	0/1:35,0:34:6.25:40,0,6	./.	1/1:17,0:17:11.73:182,12,0	1/1:33,0:33:26.68:696,27,0	0/0:29,0:28:24.36:0,24,447	1/1:25,0:25:24.43:378,24,0	1/1:25,0:25:5.81:71,6,0	1/1:6,0:6:4.54:27,5,0
chr10	10067993	.	G	GTCTC	2163.75	PASS	AB=0.885;AC=36;AF=0.692;AN=52;BaseQRankSum=-2.720;DP=541;FS=0.000;HRun=0;HaplotypeScore=107.4433;InbreedingCoeff=0.2952;MQ=65.70;MQ0=2;MQRankSum=0.776;QD=4.91;ReadPosRankSum=-0.745;VQSLOD=2.1261;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:31,0:31:30:73,0,30	0/0:4,0:4:6.02:0,6,88	./.	./.	1/1:20,7:29:3.90:60,4,0	0/0:6,0:14:6.01:0,6,56	0/0:17,0:17:6.01:0,6,74	1/1:28,0:28:11.24:73,11,0	0/1:12,0:15:10.24:10,0,120	1/1:23,0:24:24.27:337,24,0	0/1:12,3:15:0.01:0,0,0	1/1:10,1:15:2.84:70,3,0	0/0:12,0:12:18.06:0,18,275	0/0:12,0:12:3:0,3,45	1/1:22,0:22:12.04:179,12,0	1/1:12,4:16:5.93:139,6,0	1/1:6,7:15:13.60:284,14,0	1/1:6,0:13:6.02:131,6,0	1/1:15,0:14:3.01:42,3,0	1/1:25,0:25:9.02:165,9,0	1/1:15,0:15:3:25,3,0	0/1:18,0:22:3.45:3,0,83	1/1:24,0:30:5.25:24,5,0	0/1:19,0:24:3.41:3,0,58	1/1:17,1:22:6:122,6,0	0/1:22,6:29:20.19:298,0,20	1/1:12,6:20:9.02:210,9,0	1/1:6,8:14:3.01:70,3,0
chr10	10068118	.	TACACACACACAC	T	2715.88	PASS	AB=0.915;AC=24;AF=0.444;AN=54;BaseQRankSum=-1.496;DP=464;FS=14.035;HRun=0;HaplotypeScore=168.8801;InbreedingCoeff=-0.2929;MQ=49.15;MQ0=12;MQRankSum=3.109;QD=8.51;ReadPosRankSum=5.993;VQSLOD=1.2570;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:16:5.99:48,6,0	0/1:7,0:7:58.57:59,0,60	0/0:27,0:14:9:0,9,325	0/0:27,0:17:9.03:0,9,311	0/0:16,0:15:30.10:0,30,1126	0/1:18,0:18:34.35:34,0,43	0/1:14,0:15:27.53:132,0,28	1/1:18,2:18:6.02:127,6,0	0/1:20,0:20:99:372,0,147	0/1:21,0:18:99:164,0,216	0/0:4,0:4:5.85:0,6,78	1/1:9,4:15:27.09:692,27,0	0/1:10,0:11:99:319,0,114	1/1:7,2:9:3.01:105,3,0	0/1:17,0:17:64.25:64,0,128	0/1:25,0:24:96.65:97,0,154	0/1:19,0:20:77.50:77,0,108	0/1:3,0:6:24.90:25,0,112	0/1:15,1:15:38.15:298,0,38	0/0:12,2:14:2.50:0,2,9	0/1:9,1:9:43.95:44,0,95	0/0:16,8:23:1.55:0,2,4	./.	0/1:11,2:15:0:0,0,0	0/0:17,0:17:5.84:0,6,237	0/1:20,0:19:67.55:68,0,416	0/1:19,0:17:99:124,0,306	0/1:8,0:7:20.81:21,0,152
chr10	10068138	.	C	CAGAGAGAG	1253.16	PASS	AB=0.951;AC=18;AF=0.321;AN=56;BaseQRankSum=0.225;DP=428;FS=15.486;HRun=0;HaplotypeScore=149.7508;InbreedingCoeff=0.3214;MQ=38.24;MQ0=14;MQRankSum=0.479;QD=6.96;ReadPosRankSum=-2.670;VQSLOD=1.3487;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:17:5.99:48,6,0	0/0:4,0:4:11.99:0,12,141	0/0:12,0:3:9:0,9,197	0/0:8,0:3:9.03:0,9,218	0/0:19,0:18:33.11:0,33,816	0/0:21,0:19:9.03:0,9,201	0/0:18,0:14:27.03:0,27,516	0/1:10,0:7:93.18:185,0,93	0/0:22,0:21:17.84:0,18,391	0/0:25,0:20:29.51:0,30,691	0/0:4,0:4:3.01:0,3,38	1/1:15,0:15:12.36:337,12,0	1/1:12,0:13:18.41:209,18,0	1/1:8,0:9:5.99:111,6,0	0/0:21,0:19:19.46:0,19,391	0/0:22,0:20:6.33:0,6,417	0/1:16,0:16:20.52:21,0,289	0/0:6,0:6:9.01:0,9,168	0/1:16,0:14:84.77:432,0,85	0/1:7,5:11:0:0,0,0	0/1:11,0:8:43.95:44,0,82	1/1:21,0:20:0.47:1,0,0	1/1:17,0:18:0.47:1,0,0	0/0:16,0:17:0.47:0,0,1	0/0:18,0:18:8.82:0,9,174	0/0:19,0:18:15.95:0,16,490	0/1:19,0:16:20.65:21,0,586	0/0:11,0:11:2.88:0,3,107
chr10	10068142	.	C	CAGAG	1398.80	PASS	AB=0.938;AC=26;AF=0.500;AN=52;BaseQRankSum=2.754;DP=394;FS=3.491;HRun=0;HaplotypeScore=119.6806;InbreedingCoeff=-0.1825;MQ=37.67;MQ0=14;MQRankSum=1.334;QD=4.76;ReadPosRankSum=-3.535;VQSLOD=0.7472;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:2,0:2:2.60:0,3,10	0/0:9,0:2:6.02:0,6,109	0/0:6,0:2:6.02:0,6,103	0/0:19,0:18:33.11:0,33,523	0/0:10,8:18:3.84:0,4,13	0/1:17,0:13:13.05:21,0,13	0/1:11,0:8:7.19:7,0,159	0/1:22,0:21:22.05:38,0,22	0/1:24,0:19:99:236,0,189	1/1:2,0:4:1.07:4,1,0	0/1:12,0:12:4.39:89,0,4	1/1:13,0:13:18.52:148,19,0	1/1:9,0:9:6.02:84,6,0	0/1:19,2:19:47.12:89,0,47	0/1:15,1:18:37.72:66,0,38	0/1:10,1:14:36.85:37,0,66	1/1:6,0:6:3.31:59,3,0	0/1:12,0:10:90.14:90,0,211	1/1:11,0:10:1.55:4,2,0	0/0:10,0:7:0.79:0,1,56	./.	1/1:13,0:17:2.37:6,2,0	0/1:15,0:15:0:0,0,0	0/1:18,0:18:7.97:8,0,94	0/1:19,0:18:73.58:272,0,74	0/1:17,0:15:25.12:203,0,25	0/1:6,0:10:2.56:79,0,3
chr10	10068148	.	C	CAGAG	1324.18	PASS	AB=1.000;AC=31;AF=0.596;AN=52;BaseQRankSum=3.250;DP=381;FS=14.193;HRun=0;HaplotypeScore=121.8171;InbreedingCoeff=0.1090;MQ=37.33;MQ0=13;MQRankSum=2.098;QD=4.43;ReadPosRankSum=-1.755;VQSLOD=1.3877;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:1,0:1:0.47:0,0,1	./.	0/0:2,0:1:3.01:0,3,40	1/1:17,1:17:5.66:96,6,0	0/0:18,0:16:2.13:0,2,5	0/1:16,0:12:2.78:3,0,3	0/1:13,0:10:26.29:26,0,98	1/1:22,0:21:8.63:106,9,0	0/1:22,0:18:93.92:139,0,94	1/1:6,0:6:10.83:122,11,0	0/0:13,0:13:2.82:0,3,8	1/1:13,0:13:15.36:149,15,0	1/1:9,0:9:4.25:38,4,0	0/1:19,0:17:10.61:78,0,11	1/1:22,0:20:9.81:111,10,0	0/1:14,0:14:33.07:78,0,33	1/1:5,0:5:1.38:14,1,0	0/1:10,0:9:13.94:14,0,123	1/1:11,0:10:1.55:4,2,0	0/0:9,0:6:3:0,3,26	0/1:20,0:18:0.01:0,0,0	1/1:16,0:16:3.27:14,3,0	0/1:17,0:17:0:0,0,0	0/0:8,8:19:3.31:0,3,10	0/1:17,0:16:25.80:188,0,26	1/1:17,0:14:13.36:145,13,0	1/1:12,0:10:7.86:134,8,0
chr10	10069493	.	TAC	T	1934.30	PASS	AB=0.901;AC=12;AF=0.214;AN=56;BaseQRankSum=9.930;DP=716;FS=2.854;HRun=0;HaplotypeScore=89.9326;InbreedingCoeff=0.8028;MQ=60.83;MQ0=7;MQRankSum=0.054;QD=13.16;ReadPosRankSum=3.126;VQSLOD=3.5457;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:66.62:0,67,956	0/0:11,0:11:33.11:0,33,528	0/0:34,0:22:20.68:0,21,319	0/0:33,0:23:41.67:0,42,481	1/1:5,15:19:27.08:324,27,0	1/1:3,17:20:36.11:432,36,0	1/1:4,12:16:21.06:252,21,0	0/0:49,1:50:66.19:0,66,1299	1/1:1,24:23:45.14:539,45,0	0/0:28,0:28:66.17:0,66,964	0/0:33,0:33:72.18:0,72,1076	0/0:30,0:30:78.23:0,78,1194	0/0:25,1:26:12.14:0,12,628	0/0:29,0:29:75.19:0,75,1099	0/0:31,1:32:36.10:0,36,892	0/0:22,2:24:26.81:0,27,862	0/0:16,0:16:33.10:0,33,504	0/0:18,0:18:35.99:0,36,494	0/0:21,0:21:45.11:0,45,632	0/0:26,0:26:30.18:0,30,629	0/0:26,3:29:23.39:0,23,765	0/0:28,0:28:63.15:0,63,911	0/0:16,0:16:33.07:0,33,478	0/1:19,1:20:4.85:5,0,460	1/1:8,21:29:42.13:503,42,0	0/0:25,0:25:57.16:0,57,841	0/0:23,0:23:44.30:0,44,867	0/1:14,3:17:59.73:60,0,575
chr10	10069895	.	C	CT	4895.10	PASS	AB=0.743;AC=46;AF=0.821;AN=56;BaseQRankSum=-2.219;DP=543;FS=19.066;HRun=14;HaplotypeScore=105.7548;InbreedingCoeff=-0.0422;MQ=55.48;MQ0=19;MQRankSum=-1.709;QD=9.20;ReadPosRankSum=-2.767;VQSLOD=1.7080;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:16,22:40:57.69:490,58,0	1/1:5,7:12:23.95:203,24,0	1/1:6,0:5:3.59:11,4,0	0/1:9,0:7:13.16:13,0,16	1/1:14,0:23:19.40:111,19,0	1/1:17,11:29:10.38:187,10,0	1/1:10,6:14:10.98:125,11,0	1/1:15,13:27:20.94:273,21,0	0/1:11,4:15:20.91:104,0,21	1/1:13,18:31:54.74:449,55,0	1/1:11,8:18:4.48:139,4,0	1/1:5,9:15:20.79:165,21,0	1/1:5,5:10:2.09:119,2,0	1/1:9,6:15:2.89:125,3,0	0/1:7,7:13:19.13:88,0,19	0/1:8,10:18:8.94:241,0,9	0/1:11,11:18:11.57:151,0,12	1/1:14,8:19:7.76:200,8,0	0/1:11,10:21:9.72:155,0,10	1/1:13,13:27:14.56:226,15,0	0/0:8,3:9:8.80:0,9,57	0/1:16,5:21:41.36:93,0,41	1/1:5,6:14:12.03:176,12,0	0/1:11,8:17:20.18:130,0,20	1/1:9,0:16:35.03:190,35,0	1/1:21,11:33:12.29:223,12,0	1/1:8,11:19:26.47:315,26,0	1/1:6,6:11:24.37:192,24,0
chr10	10071145	.	C	CACACACACACAT	10337.36	PASS	AB=0.829;AC=41;AF=0.732;AN=56;BaseQRankSum=-0.374;DP=1056;FS=3.566;HRun=0;HaplotypeScore=287.7348;InbreedingCoeff=0.3369;MQ=40.30;MQ0=36;MQRankSum=1.587;QD=12.91;ReadPosRankSum=1.871;VQSLOD=3.5436;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,21:49:2.30:0,2,17	1/1:15,0:15:14.70:324,15,0	0/0:66,0:14:26.61:0,27,204	0/0:74,0:10:18.40:0,18,150	1/1:51,0:49:41.97:481,42,0	0/1:25,0:25:99:165,0,134	0/1:43,0:41:44.16:44,0,253	1/1:38,0:35:17.43:851,17,0	0/1:34,0:34:33.19:33,0,150	1/1:13,0:37:77.51:1272,78,0	0/1:5,11:21:0:0,0,0	1/1:19,18:37:14.71:206,15,0	1/1:11,0:38:28.54:707,29,0	1/1:11,26:43:6:118,6,0	1/1:13,24:40:2.74:41,3,0	1/1:8,24:37:11.84:192,12,0	0/1:13,12:26:2.12:441,0,2	0/1:20,0:20:99:655,0,130	1/1:20,0:20:17.89:696,18,0	1/1:3,19:25:3.37:18,3,0	1/1:68,0:63:36.26:429,36,0	1/1:19,0:19:18.01:317,18,0	0/1:9,18:35:0:0,0,0	0/0:21,37:64:0.93:0,1,3	1/1:32,0:31:44.89:536,45,0	1/1:16,24:45:89.43:2142,89,0	1/1:8,8:19:10.76:346,11,0	1/1:19,0:18:17.87:322,18,0
chr10	10071146	.	A	ATG	811.04	PASS	AB=0.990;AC=14;AF=0.250;AN=56;BaseQRankSum=3.604;DP=1022;FS=3.300;HRun=0;HaplotypeScore=242.7936;InbreedingCoeff=-0.0701;MQ=39.45;MQ0=36;MQRankSum=1.529;QD=1.96;ReadPosRankSum=4.569;VQSLOD=2.3554;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:46:13.99:0,14,155	0/0:16,0:16:8.98:0,9,90	0/0:66,0:14:39.09:0,39,513	0/0:75,0:10:27.04:0,27,359	0/1:49,2:49:99:224,0,346	0/0:23,0:23:39.73:0,40,504	0/0:43,0:41:44.52:0,45,664	0/0:41,0:38:2.45:0,2,397	0/0:33,0:33:26.95:0,27,365	0/1:38,0:34:81.05:81,0,191	0/1:19,0:19:0:0,0,0	1/1:39,0:36:1.70:22,2,0	0/1:36,0:35:34.78:35,0,98	0/0:40,0:40:12.04:0,12,164	0/0:39,0:37:9.02:0,9,121	0/0:36,0:35:6.98:0,7,112	0/1:26,0:25:9.45:9,0,101	0/1:20,0:20:17.31:17,0,168	0/0:20,0:20:21.57:0,22,172	1/1:24,0:24:2.24:9,2,0	0/1:66,0:61:7.29:7,0,202	0/0:18,0:19:4.86:0,5,62	0/0:30,0:30:2.99:0,3,46	0/0:59,0:58:8.50:0,8,69	0/1:30,2:31:99:465,0,143	0/1:45,0:43:72.41:72,0,340	0/1:18,0:18:4.73:5,0,93	0/0:21,0:20:1.78:0,2,172
chr10	10071150	.	ACAT	A	1314.10	PASS	AB=0.973;AC=27;AF=0.482;AN=56;BaseQRankSum=1.791;DP=987;FS=52.933;HRun=0;HaplotypeScore=245.4080;InbreedingCoeff=-0.4806;MQ=39.00;MQ0=35;MQRankSum=-1.722;QD=1.51;ReadPosRankSum=-1.027;VQSLOD=0.8981;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:46,0:45:13.09:13,0,26	0/1:14,4:18:79.39:103,0,79	0/1:64,0:13:21.40:21,0,362	0/1:75,0:10:11.26:11,0,334	0/1:51,0:49:99:248,0,334	0/1:25,0:25:46.81:47,0,594	0/0:38,0:36:45.88:0,46,758	0/1:41,0:38:5.45:5,0,1106	0/0:31,0:31:14.99:0,15,414	0/1:32,3:31:99:107,0,830	0/1:18,0:18:0.22:0,0,0	0/1:38,0:35:15.35:15,0,306	0/1:31,0:30:49.06:49,0,200	1/1:41,1:42:2.25:49,2,0	1/1:36,1:35:2.41:41,2,0	0/1:33,0:32:38.82:39,0,91	0/0:25,0:24:19.87:0,20,282	0/1:21,1:22:93.13:93,0,503	0/1:19,1:20:57.16:57,0,716	0/0:25,0:25:2.33:0,2,9	0/1:58,3:56:80.75:81,0,440	0/1:18,1:19:82.73:83,0,165	0/1:28,0:28:0:0,0,1	1/1:54,0:53:5.88:36,6,0	0/1:33,0:32:99:107,0,523	0/1:42,0:40:99:178,0,1015	0/1:16,1:17:34.52:35,0,108	0/1:17,1:17:44.79:45,0,213
chr10	10071159	.	ATG	A	272.93	PASS	AB=0.937;AC=16;AF=0.286;AN=56;BaseQRankSum=6.626;DP=985;FS=42.627;HRun=0;HaplotypeScore=272.7001;InbreedingCoeff=-0.1052;MQ=41.00;MQ0=33;MQRankSum=-3.350;QD=0.59;ReadPosRankSum=-3.512;VQSLOD=0.9526;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:40,1:41:6.66:7,0,12	0/1:16,1:17:64.82:65,0,162	0/0:68,1:14:38.61:0,39,671	0/0:71,0:13:29.63:0,30,489	0/1:27,12:38:32.64:33,0,458	0/1:20,2:23:48.90:49,0,653	0/0:37,3:39:57.11:0,57,1065	0/0:45,0:43:62.31:0,62,1833	0/0:31,1:32:23.46:0,23,734	0/0:33,0:30:35.98:0,36,1042	0/0:18,0:18:0:0,0,0	0/1:39,2:39:6.83:7,0,413	0/1:31,0:30:19.61:20,0,287	0/1:43,0:43:1.62:9,0,2	0/1:31,2:31:0.07:0,0,0	0/1:35,0:34:0.06:0,0,145	0/0:25,0:23:18.59:0,19,350	0/1:20,1:21:18.10:18,0,592	0/0:20,1:21:19.16:0,19,957	0/0:25,1:26:1.52:0,2,4	0/0:67,5:69:4.63:0,5,829	0/1:20,0:20:32.02:32,0,224	0/0:25,0:25:0:0,0,0	1/1:52,0:51:5.48:24,5,0	0/1:26,10:35:99:122,0,901	0/0:42,2:42:5.60:0,6,1579	0/1:13,1:14:12.42:12,0,123	0/1:16,1:16:16.66:17,0,303
chr10	10071164	.	CAG	C	65.12	PASS	AB=0.955;AC=10;AF=0.179;AN=56;BaseQRankSum=8.565;DP=1002;FS=32.342;HRun=0;HaplotypeScore=290.7885;InbreedingCoeff=0.1908;MQ=41.93;MQ0=26;MQRankSum=-4.364;QD=0.26;ReadPosRankSum=-2.200;VQSLOD=1.0102;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:36,6:42:5.69:47,6,0	0/1:14,2:16:8.33:8,0,160	0/0:68,0:14:35.09:0,35,540	0/0:76,0:15:36.31:0,36,481	0/0:38,1:39:20.89:0,21,522	0/0:24,0:24:18.74:0,19,641	0/0:42,0:41:69:0,69,1211	0/0:43,0:41:82.83:0,83,1661	0/0:35,0:35:32.90:0,33,875	0/0:30,1:30:41.01:0,41,1132	0/0:19,0:19:0:0,0,0	0/0:41,0:41:11.67:0,12,399	0/0:31,0:31:14.09:0,14,286	0/1:43,2:45:11.33:11,0,32	0/0:33,0:33:2.96:0,3,20	0/1:34,0:33:19.77:20,0,157	0/0:21,3:23:19.31:0,19,332	0/1:20,3:23:62.82:63,0,583	0/0:23,0:23:28.02:0,28,928	0/0:30,0:30:1.36:0,1,4	0/0:70,5:70:22.42:0,22,894	0/1:20,0:19:8.66:9,0,217	0/0:24,1:25:0:0,0,0	1/1:50,2:52:5.48:24,5,0	0/0:31,5:35:30.82:0,31,979	0/0:46,0:44:57.65:0,58,1700	0/1:15,0:15:17.43:17,0,158	0/0:14,0:14:0.68:0,1,336
chr10	10071207	.	CAG	C	5406.87	PASS	AB=0.608;AC=37;AF=0.661;AN=56;BaseQRankSum=12.021;DP=920;FS=14.511;HRun=0;HaplotypeScore=324.2909;InbreedingCoeff=0.6101;MQ=44.68;MQ0=21;MQRankSum=-7.061;QD=8.62;ReadPosRankSum=-0.841;VQSLOD=3.2576;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:18,15:33:8.68:72,9,0	1/1:2,11:13:4.47:157,4,0	0/0:54,0:19:54.98:0,55,866	0/0:68,0:27:49.13:0,49,1009	0/0:34,0:33:54.15:0,54,975	0/0:21,0:21:47.96:0,48,821	0/0:37,0:35:84.10:0,84,1376	0/1:19,13:27:46.23:351,0,46	0/0:43,0:43:99:0,101,1964	1/1:13,23:35:85.11:734,85,0	0/1:3,9:12:0.05:0,0,0	0/1:8,33:40:9.63:252,0,10	1/1:4,18:22:32.25:255,32,0	1/1:13,32:46:29.91:261,30,0	1/1:9,29:38:14.91:139,15,0	1/1:4,18:22:14.97:122,15,0	1/1:13,13:25:25.64:216,26,0	1/1:17,11:28:49.82:472,50,0	0/1:7,9:15:14.86:352,0,15	1/1:8,14:22:10.62:97,11,0	1/1:52,20:68:21.44:300,21,0	0/1:5,18:22:16.06:16,0,29	1/1:4,14:18:5.90:61,6,0	1/1:27,15:42:17.30:135,17,0	0/0:35,0:34:72.23:0,72,1346	1/1:11,38:48:72.76:940,73,0	1/1:4,17:21:32.92:297,33,0	1/1:9,6:15:14.32:179,14,0
chr10	10071215	.	CACAT	C	10346.67	PASS	AB=1.000;AC=41;AF=0.732;AN=56;BaseQRankSum=8.401;DP=985;FS=11.382;HRun=0;HaplotypeScore=351.5686;InbreedingCoeff=0.8955;MQ=46.12;MQ0=23;MQRankSum=-6.612;QD=15.17;ReadPosRankSum=-1.047;VQSLOD=3.3687;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:39,0:39:14.19:175,14,0	1/1:16,0:16:16.93:311,17,0	0/0:56,0:24:52.52:0,53,880	0/0:67,0:31:46.16:0,46,1341	0/0:36,0:35:54.17:0,54,1258	0/0:23,0:23:48.02:0,48,1070	0/0:39,0:37:78.24:0,78,1797	1/1:39,0:33:57.72:783,58,0	0/0:44,0:44:99:0,120,2661	1/1:37,0:36:96.19:1415,96,0	1/1:15,0:15:1.90:23,2,0	1/1:45,0:44:45.66:704,46,0	1/1:25,0:25:41.43:593,41,0	1/1:48,0:48:38.96:566,39,0	1/1:46,2:48:15.40:214,15,0	1/1:29,1:30:14.74:296,15,0	1/1:26,0:25:25.30:372,25,0	1/1:28,0:28:44.25:781,44,0	1/1:15,4:16:24.31:289,24,0	1/1:23,0:23:14.40:205,14,0	1/1:73,1:69:19.75:402,20,0	0/1:22,0:21:0:0,0,0	1/1:18,0:18:6.32:105,6,0	1/1:42,0:42:9.91:178,10,0	0/0:37,0:36:75.11:0,75,1829	1/1:50,2:51:99:2049,129,0	1/1:21,0:21:33.11:573,33,0	1/1:15,0:15:23.67:312,24,0
chr10	10071217	.	CAT	C	6549.85	PASS	AB=0.668;AC=40;AF=0.714;AN=56;BaseQRankSum=8.948;DP=988;FS=17.929;HRun=0;HaplotypeScore=344.9463;InbreedingCoeff=0.7907;MQ=45.50;MQ0=24;MQRankSum=-6.519;QD=9.56;ReadPosRankSum=-1.291;VQSLOD=3.4859;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:23,15:38:19.65:167,20,0	1/1:4,11:15:6.07:185,6,0	0/0:54,0:25:54.99:0,55,950	0/0:71,0:33:82.25:0,82,1240	0/0:31,4:34:60.17:0,60,1049	0/0:22,0:22:51.01:0,51,865	0/0:39,0:37:87.24:0,87,1501	0/1:27,13:34:7.45:476,0,7	0/0:46,0:46:99:0,123,2145	1/1:12,23:34:79.37:730,79,0	1/1:6,9:15:8.94:74,9,0	1/1:12,33:44:15.24:359,15,0	1/1:7,18:25:39.09:302,39,0	1/1:16,31:48:47.84:401,48,0	1/1:23,26:49:32.85:282,33,0	1/1:14,17:31:34.61:268,35,0	1/1:16,13:28:37.30:283,37,0	1/1:15,12:28:13.21:425,13,0	1/1:19,0:16:15.17:227,15,0	1/1:10,13:23:20.75:204,21,0	1/1:50,24:69:16.49:361,16,0	0/1:7,18:24:27.98:37,0,28	1/1:4,14:18:8.90:86,9,0	1/1:26,15:41:19.56:150,20,0	0/0:36,0:35:81.18:0,81,1428	1/1:13,37:49:82.25:996,82,0	1/1:3,18:21:32.94:299,33,0	1/1:10,6:16:29.76:238,30,0
chr10	10071221	.	CAT	C	1354.37	PASS	AB=0.992;AC=17;AF=0.304;AN=56;BaseQRankSum=16.384;DP=986;FS=0.689;HRun=0;HaplotypeScore=349.3184;InbreedingCoeff=-0.2757;MQ=46.67;MQ0=23;MQRankSum=-9.760;QD=2.52;ReadPosRankSum=9.784;VQSLOD=0.1750;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,1:36:8.04:0,8,240	0/1:16,0:16:45.08:45,0,96	0/0:56,0:27:75.26:0,75,1008	0/0:69,0:36:83.10:0,83,1403	0/0:35,0:34:57.16:0,57,1032	0/0:20,0:20:51.05:0,51,946	0/0:39,0:37:84.27:0,84,1557	0/1:41,0:36:99:121,0,337	0/0:48,0:48:99:0,129,2364	0/1:37,0:36:99:272,0,114	0/0:14,0:14:11.10:0,11,93	0/1:48,0:47:99:117,0,200	0/1:26,0:26:83.82:84,0,121	0/1:46,1:47:65.57:66,0,88	0/0:50,0:50:6.68:0,7,192	0/1:29,0:30:23.35:23,0,156	0/1:28,0:27:52.86:53,0,90	0/1:27,0:27:99:132,0,135	0/0:25,0:22:19.59:0,20,405	0/1:25,0:25:14.71:15,0,121	0/1:69,0:66:42.62:43,0,304	0/0:25,0:25:11.51:0,12,68	0/1:18,0:18:14.48:16,0,14	0/1:39,2:41:43.86:44,0,114	0/0:31,0:30:75.15:0,75,1440	0/1:47,0:46:12.70:332,0,13	1/1:22,0:22:17.62:119,18,0	0/1:14,0:14:38.41:38,0,94
chr10	10071250	.	TAC	T	1650.02	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=0.788;DP=1052;FS=2.657;HRun=0;HaplotypeScore=337.5040;InbreedingCoeff=0.9996;MQ=50.98;MQ0=6;MQRankSum=5.654;QD=30.56;ReadPosRankSum=1.594;VQSLOD=2.8460;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,107,1741	0/0:19,0:19:45.15:0,45,758	0/0:56,0:29:60.46:0,60,930	0/0:50,0:32:61.73:0,62,946	1/1:2,20:21:63.19:822,63,0	0/0:17,0:17:45.15:0,45,756	0/0:41,0:39:93.28:0,93,1545	0/0:38,0:37:90.27:0,90,1501	0/0:46,0:45:99:0,120,1955	0/0:42,0:42:99:0,108,1786	0/0:20,0:19:45.03:0,45,739	0/0:47,0:46:99:0,108,1793	0/0:35,0:35:87.23:0,87,1434	0/0:47,0:47:87:0,87,1468	0/0:54,0:54:99:0,117,2017	0/0:32,0:32:56.14:0,56,1093	0/0:29,0:29:63.13:0,63,1015	0/0:42,0:42:99:0,99,1723	0/0:23,0:23:42.08:0,42,650	0/0:34,0:34:66.22:0,66,1142	0/0:86,0:84:99:0,138,2264	0/0:30,0:30:42.13:0,42,690	0/0:21,0:21:30.10:0,30,519	0/0:47,0:47:59.02:0,59,1028	1/1:8,24:31:72.23:949,72,0	0/0:50,0:50:99:0,141,2360	0/0:21,0:21:51.17:0,51,880	0/0:15,0:15:39.13:0,39,675
chr10	10071660	.	A	ATTT	2162.20	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-5.891;DP=691;FS=2.821;HRun=8;HaplotypeScore=165.4472;InbreedingCoeff=0.9911;MQ=88.48;MQ0=0;MQRankSum=-0.812;QD=39.31;ReadPosRankSum=-1.964;VQSLOD=1.3984;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:93.25:0,93,1207	0/0:11,0:11:27.06:0,27,354	0/0:27,0:28:54.03:0,54,673	0/0:23,0:23:57.15:0,57,736	1/1:5,18:23:60.16:1075,60,0	0/0:31,0:30:84.27:0,84,1104	0/0:23,0:23:57.12:0,57,703	0/0:33,0:33:84.22:0,84,1076	0/0:20,0:20:54.17:0,54,710	0/0:29,0:29:69.17:0,69,905	0/0:16,0:16:45.13:0,45,576	0/0:24,0:24:63.16:0,63,804	0/0:21,0:21:63.20:0,63,827	0/0:19,0:19:51.13:0,51,655	0/0:33,0:33:96.31:0,96,1261	0/0:30,0:30:90.21:0,90,1161	0/0:22,0:22:63.17:0,63,810	0/0:15,0:15:45.15:0,45,591	0/0:24,0:24:60.17:0,60,788	0/0:35,0:35:99:0,102,1284	0/0:13,0:13:30.04:0,30,378	0/0:28,0:28:81.26:0,81,1064	0/0:27,0:27:66.17:0,66,867	0/0:16,0:16:42.11:0,42,546	1/1:6,26:32:63.21:1208,63,0	0/0:34,0:34:99:0,99,1275	0/0:39,0:38:99:0,105,1377	0/0:5,0:5:15.05:0,15,197
chr10	10072358	.	A	AT	1180.38	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-2.219;DP=666;FS=0.000;HRun=1;HaplotypeScore=91.5607;InbreedingCoeff=0.9933;MQ=80.97;MQ0=0;MQRankSum=-2.183;QD=32.79;ReadPosRankSum=0.561;VQSLOD=3.3230;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,147,1907	0/0:7,0:7:21.06:0,21,259	0/0:20,0:20:53.19:0,53,649	0/0:17,0:17:20.70:0,21,536	1/1:0,25:25:60.08:874,60,0	0/0:18,0:18:51.15:0,51,647	0/0:37,0:37:99:0,105,1362	0/0:36,0:36:99:0,99,1286	0/0:30,0:30:87.28:0,87,1130	0/0:26,0:26:75.24:0,75,974	0/0:8,0:8:24.08:0,24,312	0/0:26,0:26:75.23:0,75,956	0/0:21,0:21:60.18:0,60,764	0/0:31,0:31:90.28:0,90,1153	0/0:27,0:27:75.24:0,75,974	0/0:17,0:17:51.17:0,51,662	0/0:36,0:36:99:0,108,1385	0/0:25,0:25:75.24:0,75,974	0/0:22,0:22:54.18:0,54,700	0/0:26,0:26:78.22:0,78,983	0/0:37,0:37:99:0,108,1402	0/0:16,0:16:48.16:0,48,623	0/0:14,0:14:39.13:0,39,506	0/0:32,0:32:84.27:0,84,1091	1/1:2,9:10:30.08:428,30,0	0/0:24,0:24:66.21:0,66,845	0/0:19,0:19:57.17:0,57,725	0/0:8,0:8:24.08:0,24,312
chr10	10072395	.	AT	A	513.93	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=4.802;DP=671;FS=5.230;HRun=1;HaplotypeScore=77.1241;InbreedingCoeff=0.9664;MQ=81.03;MQ0=0;MQRankSum=-2.883;QD=19.77;ReadPosRankSum=0.187;VQSLOD=3.6840;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,123,1883	0/0:10,0:10:30.10:0,30,479	0/0:21,0:21:59.88:0,60,847	0/0:26,0:26:71.41:0,71,971	1/1:2,10:12:9:125,9,0	0/0:18,0:18:54.17:0,54,838	0/0:30,0:30:90.29:0,90,1409	0/0:29,0:29:87.26:0,87,1322	0/0:28,0:28:84.29:0,84,1342	0/0:23,0:23:63.21:0,63,1006	0/0:8,0:8:24.08:0,24,383	0/0:37,0:37:99:0,111,1709	0/0:27,0:27:81.26:0,81,1271	0/0:34,0:34:99:0,102,1603	0/0:18,0:18:54.18:0,54,861	0/0:20,0:20:60.20:0,60,959	0/0:34,0:34:99:0,102,1626	0/0:25,0:25:75.23:0,75,1174	0/0:28,0:28:84.25:0,84,1265	0/0:20,0:20:60.20:0,60,958	0/0:52,0:52:99:0,153,2337	0/0:16,0:16:48.16:0,48,765	0/0:11,0:11:30.03:0,30,449	0/0:34,0:34:99:0,102,1624	1/1:0,14:14:36.12:503,36,0	0/0:23,0:23:66.16:0,66,1024	0/0:23,0:23:69.21:0,69,1058	0/0:8,0:8:24.08:0,24,383
chr10	10072578	.	T	TA	16493.47	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=4.532;DP=660;FS=22.545;HRun=8;HaplotypeScore=95.3818;InbreedingCoeff=0.9665;MQ=76.63;MQ0=0;MQRankSum=-2.923;QD=28.29;ReadPosRankSum=2.195;VQSLOD=3.4451;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,32:34:93.28:1073,93,0	1/1:1,9:10:27.08:312,27,0	0/0:13,0:13:5.12:0,5,168	0/0:13,0:13:36.01:0,36,325	1/1:7,22:29:60.18:692,60,0	0/0:11,0:11:30.02:0,30,274	0/0:14,0:14:15.47:0,15,306	1/1:3,29:32:87.26:1003,87,0	0/0:26,0:26:69.03:0,69,632	1/1:3,22:25:66.20:762,66,0	1/1:1,13:14:33.10:381,33,0	1/1:3,19:22:57.17:658,57,0	1/1:0,16:16:42.12:485,42,0	1/1:4,32:36:90.27:1039,90,0	1/1:0,22:22:63.19:727,63,0	1/1:4,26:30:72.21:831,72,0	1/1:4,24:28:66.20:762,66,0	1/1:2,21:23:54.16:623,54,0	1/1:4,24:28:72.19:814,72,0	1/1:5,31:36:62.76:958,63,0	1/1:4,16:20:48.14:554,48,0	1/1:4,25:29:69.21:796,69,0	1/1:4,25:29:75.22:858,75,0	1/1:2,19:21:57.17:658,57,0	1/1:1,26:27:63.19:727,63,0	1/1:5,27:32:79.42:868,79,0	1/1:8,20:28:32.19:602,32,0	1/1:1,10:11:27.08:311,27,0
chr10	10073010	.	CTTTGTGTGTG	C	9459.33	PASS	AB=0.879;AC=42;AF=0.750;AN=56;BaseQRankSum=2.041;DP=654;FS=9.102;HRun=0;HaplotypeScore=192.1111;InbreedingCoeff=0.5220;MQ=65.48;MQ0=18;MQRankSum=-4.733;QD=18.19;ReadPosRankSum=0.764;VQSLOD=2.8411;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,0:30:11.95:137,12,0	1/1:0,12:13:14.65:399,15,0	0/0:35,0:21:53.79:0,54,563	0/0:32,0:19:31.94:0,32,432	0/1:18,0:19:99:120,0,599	0/0:15,0:15:29.99:0,30,261	0/0:28,0:28:60.07:0,60,784	1/1:28,0:27:68.88:597,69,0	0/0:23,0:23:69.07:0,69,1104	1/1:2,30:32:77.76:801,78,0	1/1:0,15:16:11.97:253,12,0	1/1:2,0:17:16.10:192,16,0	1/1:2,2:25:16.49:379,16,0	1/1:12,2:18:32.76:432,33,0	1/1:0,31:34:33.11:938,33,0	1/1:1,18:19:32.64:1097,33,0	1/1:18,1:21:44.78:478,45,0	0/1:7,2:9:14.02:344,0,14	1/1:1,0:22:62.84:715,63,0	1/1:1,0:21:6.02:162,6,0	1/1:4,0:33:2.35:18,2,0	1/1:24,0:31:66.63:711,67,0	1/1:1,0:30:1.95:40,2,0	1/1:1,1:20:14.58:265,15,0	0/1:19,0:20:99:140,0,477	0/1:18,1:21:37.86:701,0,38	1/1:0,21:22:11.83:259,12,0	1/1:0,10:11:9.03:283,9,0
chr10	10073012	.	TTGTG	T	2559.05	PASS	AB=1.000;AC=42;AF=0.808;AN=52;BaseQRankSum=3.027;DP=655;FS=2.280;HRun=0;HaplotypeScore=168.0374;InbreedingCoeff=0.3996;MQ=63.50;MQ0=21;MQRankSum=-3.614;QD=5.29;ReadPosRankSum=-0.105;VQSLOD=2.4374;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:31,0:31:9.01:84,9,0	1/1:13,0:13:11.88:111,12,0	0/0:35,0:20:0:0,0,0	./.	0/0:21,0:21:14.77:0,15,197	1/1:10,0:14:3:28,3,0	1/1:23,1:29:8.73:109,9,0	0/0:28,0:27:3.01:0,3,55	1/1:10,13:24:33.11:493,33,0	1/1:31,0:31:6.01:56,6,0	1/1:17,0:17:6.01:56,6,0	1/1:18,0:17:11.68:97,12,0	1/1:24,0:23:20.05:174,20,0	1/1:17,0:17:8.38:64,8,0	1/1:34,0:34:27.03:249,27,0	1/1:18,0:18:32.90:298,33,0	1/1:20,0:20:6.01:56,6,0	0/1:11,0:10:66.93:69,0,67	1/1:24,0:22:12.01:111,12,0	1/1:22,0:22:6.01:56,6,0	./.	1/1:30,0:29:21.49:193,21,0	1/1:31,0:30:2.80:28,3,0	1/1:21,0:21:15.02:139,15,0	0/0:20,0:20:15.01:0,15,228	0/1:21,0:20:8.53:96,0,9	1/1:23,0:22:0.61:48,1,0	1/1:11,0:11:9.01:84,9,0
chr10	10074998	.	C	CACTA	28925.73	PASS	AB=0.552;AC=41;AF=0.732;AN=56;BaseQRankSum=-8.544;DP=651;FS=0.000;HRun=0;HaplotypeScore=106.0483;InbreedingCoeff=0.9173;MQ=86.95;MQ0=0;MQRankSum=-7.456;QD=59.40;ReadPosRankSum=1.647;VQSLOD=6.5157;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,28:37:69.24:1791,69,0	1/1:1,7:9:18.06:467,18,0	0/0:33,0:33:84.27:0,84,1452	0/0:20,0:20:39.13:0,39,680	0/0:21,0:21:51.17:0,51,917	0/0:28,0:27:81.28:0,81,1456	0/0:18,0:18:51.17:0,51,917	1/1:16,18:36:78.23:1768,78,0	0/0:26,0:26:75.26:0,75,1342	1/1:5,28:33:93.31:2298,93,0	1/1:1,25:26:69.15:1675,69,0	1/1:7,14:21:48.16:1245,48,0	1/1:3,20:23:63.17:1536,63,0	1/1:2,20:22:57.20:1479,57,0	1/1:7,23:34:72.21:1813,72,0	0/1:3,13:16:8.78:1046,0,9	1/1:1,18:19:54.19:1402,54,0	1/1:2,9:11:30.10:757,30,0	1/1:7,15:23:54.18:1308,54,0	1/1:8,19:29:63.10:1446,63,0	1/1:3,13:16:23.70:565,24,0	1/1:2,22:24:63.22:1636,63,0	1/1:3,17:23:45.15:1168,45,0	1/1:3,18:23:45.15:1169,45,0	0/0:18,0:18:42.14:0,42,755	1/1:6,22:28:81.28:2021,81,0	1/1:3,18:21:54.19:1402,54,0	1/1:2,11:13:36.12:933,36,0
chr10	10075268	.	T	TA	1814.40	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-9.773;DP=592;FS=5.802;HRun=7;HaplotypeScore=62.3355;InbreedingCoeff=0.9779;MQ=80.87;MQ0=0;MQRankSum=0.089;QD=27.91;ReadPosRankSum=0.827;VQSLOD=4.4391;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:68.91:0,69,636	0/0:14,0:14:33.02:0,33,311	0/0:22,0:22:34.33:0,34,420	0/0:12,0:12:30.02:0,30,278	0/0:26,0:26:63.07:0,63,597	1/1:2,26:27:72.22:870,72,0	1/1:3,13:16:36.11:435,36,0	0/0:32,0:32:81.01:0,81,749	1/1:2,19:21:54.17:652,54,0	0/0:24,0:24:57.07:0,57,543	0/0:22,0:22:57.08:0,57,550	0/0:21,0:21:54.08:0,54,517	0/0:20,0:20:57.08:0,57,545	0/0:18,0:18:48.07:0,48,463	0/0:20,0:20:51.08:0,51,492	0/0:14,1:15:8.82:0,9,365	0/0:28,0:28:81.11:0,81,775	0/0:15,0:15:41.97:0,42,381	0/0:22,0:22:60.07:0,60,570	0/0:33,0:33:93.14:0,93,897	0/0:18,0:18:48.07:0,48,459	0/0:26,0:26:72.05:0,72,675	0/0:25,0:25:69.04:0,69,646	0/0:17,0:17:48:0,48,442	0/0:19,0:19:45.04:0,45,427	0/0:15,0:15:42.03:0,42,394	0/0:28,0:28:81.13:0,81,782	0/0:10,0:10:26.99:0,27,251
chr10	10075758	.	G	GT	5081.67	PASS	AB=1.000;AC=49;AF=0.875;AN=56;BaseQRankSum=6.143;DP=553;FS=1.678;HRun=10;HaplotypeScore=113.9757;InbreedingCoeff=0.7818;MQ=79.67;MQ0=0;MQRankSum=-4.356;QD=10.41;ReadPosRankSum=3.733;VQSLOD=4.0237;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:18:45.53:188,46,0	1/1:10,0:10:24.17:99,24,0	0/0:18,0:19:25.40:0,25,208	0/1:16,0:14:42.89:43,0,148	0/0:25,0:25:65.87:0,66,535	1/1:4,21:25:57.14:608,57,0	1/1:2,10:12:5.43:263,5,0	1/1:34,0:34:57.21:255,57,0	1/1:5,16:21:20.47:423,20,0	1/1:22,0:22:50.89:208,51,0	1/1:32,0:32:77.49:316,77,0	1/1:18,0:18:40.18:164,40,0	1/1:15,0:15:35.16:149,35,0	1/1:15,0:15:24.17:99,24,0	1/1:11,0:11:24.11:99,24,0	1/1:23,0:23:42.85:175,43,0	1/1:14,0:14:29.46:121,29,0	1/1:8,0:8:18.75:77,19,0	1/1:25,0:25:53.63:220,54,0	1/1:33,0:33:69.64:285,70,0	1/1:11,0:11:24.11:99,24,0	1/1:26,0:26:61.60:253,62,0	1/1:18,0:18:42.85:176,43,0	1/1:6,0:6:8.04:33,8,0	0/0:21,0:21:50.87:0,51,411	1/1:29,0:29:59.56:271,60,0	1/1:25,0:25:56.31:232,56,0	1/1:21,0:21:53.83:226,54,0
chr10	10075766	.	T	TTA	18075.11	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=-7.168;DP=560;FS=8.351;HRun=0;HaplotypeScore=81.0796;InbreedingCoeff=0.9877;MQ=79.40;MQ0=0;MQRankSum=-4.200;QD=43.35;ReadPosRankSum=3.110;VQSLOD=6.4962;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,17:19:51.17:880,51,0	1/1:1,9:10:27.09:465,27,0	0/0:16,0:16:36.04:0,36,392	0/0:21,0:19:32.30:0,32,400	0/0:29,0:29:84.21:0,84,1065	0/0:25,0:25:61.23:0,61,289	0/0:12,0:12:29.38:0,29,157	1/1:4,34:40:99:1543,105,0	0/0:18,0:18:42.36:0,42,205	1/1:1,22:23:66.17:1046,66,0	1/1:1,31:33:90.19:1470,90,0	1/1:0,20:20:45.15:777,45,0	1/1:1,15:16:39.13:670,39,0	1/1:1,13:15:27.09:466,27,0	1/1:1,10:11:27.09:466,27,0	1/1:1,21:22:48.15:829,48,0	1/1:0,15:15:33.11:570,33,0	1/1:1,8:9:21.07:361,21,0	1/1:0,21:21:63.20:1062,63,0	1/1:1,29:30:78.23:1347,78,0	1/1:0,10:10:27.09:466,27,0	1/1:0,25:25:75.09:1226,75,0	1/1:0,18:19:48.16:828,48,0	1/1:1,5:6:9.02:155,9,0	0/0:22,0:22:66.17:0,66,856	1/1:0,27:29:87.20:1336,87,0	1/1:2,22:24:66.20:1113,66,0	1/1:0,19:20:60.04:998,60,0
chr10	10076475	.	ATTTG	A	1669.36	PASS	AB=0.955;AC=12;AF=0.231;AN=52;BaseQRankSum=-0.197;DP=315;FS=4.918;HRun=0;HaplotypeScore=97.8270;InbreedingCoeff=0.1230;MQ=57.21;MQ0=4;MQRankSum=0.641;QD=11.06;ReadPosRankSum=-0.242;VQSLOD=2.8264;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:5.98:0,6,52	0/0:3,0:3:3.01:0,3,34	0/0:22,0:18:44.02:0,44,689	0/0:8,0:6:9.03:0,9,120	0/0:38,1:39:34.33:0,34,1798	1/1:2,14:16:39.13:648,39,0	0/1:12,15:27:4.42:478,0,4	0/1:20,0:15:29.38:29,0,38	1/1:3,16:19:33.11:550,33,0	0/0:8,0:8:11.48:0,11,103	0/0:6,0:6:8.76:0,9,77	0/1:5,0:5:4.12:12,0,4	0/0:6,0:6:12:0,12,117	0/0:2,0:2:2.50:0,2,9	0/0:2,0:2:6:0,6,59	0/0:2,0:2:3.01:0,3,30	0/1:18,0:18:61.74:62,0,97	0/1:8,0:8:10.01:10,0,41	0/1:10,0:10:9.48:16,0,9	0/0:8,0:8:3.90:0,4,40	./.	0/0:2,0:2:1.25:0,1,3	0/0:4,0:4:5.23:0,5,43	./.	0/0:25,0:25:60.18:0,60,1354	0/1:13,0:13:3.95:4,0,126	0/1:15,0:15:3.78:4,0,174	0/0:11,0:11:5.41:0,5,142
chr10	10076498	.	TTC	T	491.70	PASS	AB=0.819;AC=12;AF=0.214;AN=56;BaseQRankSum=4.564;DP=350;FS=19.001;HRun=0;HaplotypeScore=109.9455;InbreedingCoeff=-0.3110;MQ=55.46;MQ0=2;MQRankSum=-6.787;QD=4.35;ReadPosRankSum=-2.239;VQSLOD=0.9510;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:3,3:6:11.95:12,0,105	0/0:1,0:1:3.01:0,3,30	0/0:34,0:32:92.29:0,92,1759	0/0:10,0:8:21.07:0,21,410	0/0:34,0:34:99:0,102,2012	0/0:18,0:18:50.50:0,50,500	0/0:26,0:26:62.91:0,63,810	0/0:25,6:26:2.40:0,2,786	0/0:22,0:22:50.78:0,51,592	0/1:9,1:10:18.60:19,0,468	0/1:7,1:8:41.07:41,0,197	0/1:7,2:9:30.48:30,0,241	0/0:12,0:12:32.93:0,33,545	0/1:4,2:6:33.50:34,0,197	0/0:3,0:3:9.03:0,9,151	0/0:2,0:2:6.01:0,6,70	0/1:13,3:16:48.71:49,0,395	0/0:3,0:3:6.02:0,6,107	0/1:8,2:9:76.35:76,0,215	0/1:8,1:9:20.70:21,0,408	0/0:6,0:6:18.03:0,18,253	0/1:2,1:3:38.68:39,0,108	0/0:5,0:5:15.04:0,15,259	0/0:3,0:3:9.02:0,9,111	0/0:27,0:27:81.28:0,81,1643	0/1:8,1:9:23.99:24,0,322	0/1:14,4:18:99:143,0,623	0/1:6,3:9:99:152,0,199
chr10	10076512	.	TG	T	7734.65	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=11.613;DP=389;FS=39.914;HRun=1;HaplotypeScore=90.5192;InbreedingCoeff=0.9358;MQ=69.10;MQ0=0;MQRankSum=-8.640;QD=36.66;ReadPosRankSum=-2.501;VQSLOD=1.6118;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,8:9:24.04:313,24,0	1/1:0,3:3:6.02:82,6,0	0/0:36,0:36:99:0,102,1531	0/0:14,0:13:39.12:0,39,585	0/0:36,0:36:99:0,105,1669	0/0:16,0:16:42.14:0,42,671	0/0:28,0:28:69.23:0,69,1088	1/1:0,32:32:84.28:1175,84,0	0/0:26,0:26:63.16:0,63,955	1/1:0,16:16:48.14:649,48,0	1/1:0,16:16:42.01:540,42,0	1/1:0,9:9:24.08:335,24,0	1/1:0,13:13:36.08:481,36,0	1/1:0,8:8:24.08:336,24,0	1/1:0,4:4:12.04:168,12,0	1/1:0,5:5:12.04:168,12,0	1/1:0,15:15:36.12:503,36,0	1/1:0,3:3:6.02:84,6,0	1/1:0,8:7:18.06:252,18,0	1/1:0,10:10:30.10:419,30,0	1/1:0,8:8:21.03:271,21,0	1/1:0,6:6:18.06:252,18,0	1/1:0,8:8:24.08:335,24,0	1/1:0,5:5:12.04:168,12,0	0/0:22,0:22:66.23:0,66,1055	1/1:0,10:10:24.08:332,24,0	1/1:0,17:17:51.17:706,51,0	1/1:0,6:6:12.02:168,12,0
chr10	10077233	.	TTGTGTGTG	T	1529.11	PASS	AB=0.810;AC=9;AF=0.167;AN=54;BaseQRankSum=0.757;DP=569;FS=4.125;HRun=0;HaplotypeScore=181.1117;InbreedingCoeff=0.7700;MQ=59.56;MQ0=9;MQRankSum=-6.337;QD=14.85;ReadPosRankSum=1.311;VQSLOD=2.9366;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:26:29.25:0,29,530	0/0:8,0:9:21.07:0,21,706	./.	0/0:20,0:17:3.01:0,3,44	1/1:9,4:12:5.97:95,6,0	1/1:14,8:23:21.07:503,21,0	0/1:13,4:17:14.40:137,0,14	0/0:32,0:31:21.07:0,21,529	1/1:18,13:31:24.08:582,24,0	0/0:21,0:21:24.08:0,24,768	0/0:12,0:11:24.08:0,24,769	0/0:15,0:16:15.05:0,15,241	0/0:10,0:15:20.64:0,21,415	0/0:10,0:15:18.04:0,18,323	0/0:19,0:19:21.07:0,21,723	0/0:25,0:26:33.11:0,33,1073	0/0:34,0:33:54.19:0,54,1949	0/0:16,0:15:19.58:0,20,572	0/0:26,0:24:18.63:0,19,490	0/0:16,0:17:30.10:0,30,920	0/0:25,0:24:24.08:0,24,855	0/0:13,0:13:12.51:0,13,381	0/0:15,0:19:15.05:0,15,314	0/0:21,0:28:33.11:0,33,683	1/1:12,5:19:17.92:367,18,0	0/0:19,0:19:19.27:0,19,485	0/0:21,0:19:18.06:0,18,566	0/0:12,0:12:15.05:0,15,547
chr10	10077389	.	CCTG	C	1679.18	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=2.572;DP=494;FS=29.329;HRun=0;HaplotypeScore=164.1360;InbreedingCoeff=0.6564;MQ=69.72;MQ0=3;MQRankSum=-4.599;QD=20.99;ReadPosRankSum=0.988;VQSLOD=1.9362;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:33.45:0,33,239	0/0:12,0:12:19.91:0,20,108	0/0:26,0:20:53.81:0,54,849	0/0:35,0:28:77.51:0,78,974	0/0:14,0:14:27.80:0,28,161	1/1:9,1:10:29.91:320,30,0	1/1:33,1:32:80.83:900,81,0	0/0:23,0:23:49.08:0,49,308	1/1:19,2:21:59.79:598,60,0	0/0:14,0:14:16.88:0,17,174	0/0:12,0:12:3.53:0,4,85	0/0:13,0:13:2.70:0,3,113	0/0:13,0:13:8.02:0,8,85	0/0:6,0:6:14.75:0,15,96	0/1:15,0:15:1.13:1,0,113	0/0:18,0:18:25.78:0,26,192	0/0:23,0:23:27.09:0,27,280	0/0:5,0:4:3.45:0,3,22	0/0:14,0:13:25.39:0,25,164	0/0:14,0:14:10.22:0,10,178	0/0:27,0:26:57.32:0,57,360	0/0:16,0:16:15.66:0,16,191	0/0:17,0:17:26.52:0,27,175	0/0:16,0:16:14.83:0,15,98	0/0:15,0:15:15.08:0,15,154	0/0:27,0:27:39.79:0,40,301	0/0:18,0:18:11.46:0,11,152	0/0:12,0:12:0.22:0,0,51
chr10	10077390	.	CTGTTGT	C	7075.23	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-2.876;DP=489;FS=3.109;HRun=0;HaplotypeScore=169.1180;InbreedingCoeff=0.8844;MQ=68.12;MQ0=3;MQRankSum=-3.819;QD=22.04;ReadPosRankSum=2.699;VQSLOD=4.5211;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:23,1:24:21.02:263,21,0	1/1:12,0:12:21.06:284,21,0	0/0:25,0:19:42.05:0,42,781	0/0:34,0:27:45.15:0,45,967	0/0:14,0:14:13.26:0,13,38	0/0:10,0:10:23.82:0,24,199	0/0:33,0:31:46.97:0,47,306	1/1:8,15:23:44.61:483,45,0	0/0:21,0:21:27.60:0,28,199	1/1:12,2:14:24.04:353,24,0	1/1:8,4:12:15.05:264,15,0	1/1:10,3:13:30.07:438,30,0	1/1:11,2:13:27.05:327,27,0	1/1:6,0:6:1.30:22,1,0	1/1:14,1:15:26.99:374,27,0	1/1:14,4:18:39.06:512,39,0	1/1:20,1:21:25.98:267,26,0	1/1:5,0:4:3.01:41,3,0	1/1:4,10:13:29.98:318,30,0	1/1:10,4:14:21.06:339,21,0	1/1:27,0:26:38.21:448,38,0	1/1:13,3:16:30.05:467,30,0	1/1:11,5:17:17.65:289,18,0	0/0:15,1:16:0.63:0,1,1	0/0:13,0:15:10.23:0,10,102	1/1:24,3:27:65.95:844,66,0	1/1:15,2:18:26.92:297,27,0	1/1:8,4:12:30.07:446,30,0
chr10	10077413	.	GTCGTCGTCGTCGTCGTCGTCATCGTCGTC	G	9122.71	PASS	AB=0.978;AC=38;AF=0.731;AN=52;BaseQRankSum=3.461;DP=336;FS=6.662;HRun=0;HaplotypeScore=236.0515;InbreedingCoeff=0.5323;MQ=43.20;MQ0=7;MQRankSum=-4.974;QD=39.84;ReadPosRankSum=1.743;VQSLOD=3.1148;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:18,1:19:3.01:217,3,0	1/1:9,0:9:3.01:75,3,0	0/0:20,0:10:3.15:0,3,11	0/1:21,0:10:25.59:26,0,67	0/0:6,0:6:3.01:0,3,109	0/0:7,0:7:9.97:0,10,194	0/0:31,0:27:25.65:0,26,784	1/1:14,0:14:0.43:1,0,0	0/0:17,0:17:18.89:0,19,601	1/1:8,1:9:6.02:439,6,0	1/1:7,4:11:9.03:659,9,0	1/1:5,2:7:12.04:793,12,0	1/1:7,2:9:6.02:426,6,0	./.	1/1:10,0:10:6.02:443,6,0	1/1:9,2:11:12.04:846,12,0	1/1:12,1:13:5.95:391,6,0	1/1:4,0:4:3.01:109,3,0	./.	1/1:3,4:7:12.04:879,12,0	0/1:12,0:12:0:0,0,0	1/1:8,3:11:12.04:709,12,0	1/1:7,6:13:18.06:870,18,0	1/1:14,1:15:8.86:218,9,0	0/0:11,0:11:5.86:0,6,239	1/1:9,3:12:14.97:887,15,0	1/1:10,1:11:3.48:222,3,0	1/1:6,4:10:15.05:915,15,0
chr10	10077423	.	T	TC	1772.51	PASS	AB=1.000;AC=30;AF=0.536;AN=56;BaseQRankSum=3.018;DP=259;FS=1.369;HRun=1;HaplotypeScore=135.8929;InbreedingCoeff=0.4864;MQ=38.52;MQ0=6;MQRankSum=-4.223;QD=14.07;ReadPosRankSum=1.422;VQSLOD=3.2478;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:6,1:7:2.44:0,2,6	1/1:3,3:6:7.75:93,8,0	0/0:13,0:4:6.02:0,6,76	0/0:19,0:8:11.15:0,11,216	0/0:4,0:4:3.01:0,3,42	0/0:9,0:9:18.06:0,18,234	0/0:35,0:31:36.12:0,36,474	0/0:7,0:7:4.56:0,5,40	0/0:21,0:21:21.03:0,21,270	1/1:7,0:7:12.89:141,13,0	1/1:8,0:8:14.77:141,15,0	0/1:6,0:6:2.71:48,0,3	1/1:6,0:6:9.70:115,10,0	1/1:6,0:5:15.03:178,15,0	1/1:8,0:8:20.71:212,21,0	1/1:6,0:6:12.14:167,12,0	0/1:8,0:8:26.61:27,0,39	0/0:1,1:2:0.47:0,0,1	0/0:5,0:5:2.50:0,2,9	1/1:6,0:6:0.80:105,1,0	1/1:4,0:4:3:25,3,0	1/1:6,0:6:8.84:57,9,0	1/1:9,1:10:19.15:226,19,0	1/1:10,1:11:1.85:74,2,0	0/0:11,0:11:15.03:0,15,192	0/1:9,0:9:9.52:83,0,10	1/1:9,0:9:8.05:148,8,0	0/1:10,0:10:4.86:111,0,5
chr10	10077430	.	CGT	C	591.21	PASS	AB=0.979;AC=29;AF=0.604;AN=48;BaseQRankSum=6.558;DP=168;FS=3.426;HRun=0;HaplotypeScore=104.1661;InbreedingCoeff=0.4300;MQ=37.33;MQ0=7;MQRankSum=-3.727;QD=8.69;ReadPosRankSum=5.611;VQSLOD=3.2475;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,0:1:2.88:15,3,0	./.	0/0:17,0:3:3:0,3,26	0/1:14,0:3:25.59:26,0,55	0/0:5,0:5:3.45:0,3,36	0/0:6,0:6:9.02:0,9,145	0/0:37,0:33:28.56:0,29,390	0/0:1,0:1:0:0,0,0	0/0:22,0:22:23.53:0,24,326	1/1:2,0:3:5.85:55,6,0	1/1:4,0:4:8.98:75,9,0	1/1:3,2:5:9.64:71,10,0	1/1:2,0:2:5.74:30,6,0	./.	1/1:3,0:4:6.02:87,6,0	1/1:2,2:4:7.40:63,7,0	1/1:3,0:3:5.65:28,6,0	0/0:1,0:1:1.55:0,2,4	./.	1/1:4,0:4:11.67:66,12,0	./.	1/1:3,0:3:8.81:53,9,0	0/1:6,0:6:11.29:19,0,11	0/1:4,0:4:6.61:7,0,11	0/0:10,0:10:5.93:0,6,61	1/1:4,0:4:11.49:60,11,0	1/1:1,0:2:3:27,3,0	1/1:4,0:4:11.60:64,12,0
chr10	10077443	.	TCG	T	2581.71	PASS	AB=1.000;AC=45;AF=0.865;AN=52;BaseQRankSum=3.084;DP=302;FS=0.000;HRun=0;HaplotypeScore=105.2565;InbreedingCoeff=-0.0017;MQ=31.58;MQ0=4;MQRankSum=-1.546;QD=9.22;ReadPosRankSum=4.698;VQSLOD=2.6768;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:14:21.31:164,21,0	./.	1/1:17,0:4:5.81:34,6,0	0/0:15,0:1:0.47:0,0,1	1/1:7,0:7:2.72:18,3,0	0/1:9,0:8:9.76:13,0,10	1/1:35,0:29:14.04:121,14,0	0/1:9,0:8:8.04:83,0,8	1/1:19,0:19:15.97:126,16,0	1/1:12,1:11:9.56:201,10,0	1/1:9,0:8:11.83:95,12,0	1/1:8,2:10:23.80:201,24,0	1/1:5,0:5:5.83:34,6,0	./.	1/1:5,2:7:9.02:113,9,0	1/1:4,2:6:13.46:130,13,0	1/1:9,1:10:20.71:145,21,0	0/1:8,0:7:7.16:22,0,7	0/1:7,0:6:0.41:43,0,0	1/1:10,0:10:23.58:174,24,0	1/1:4,0:4:5.99:50,6,0	1/1:13,0:11:17.88:142,18,0	1/1:18,0:18:13.83:214,14,0	1/1:10,1:11:11.48:100,11,0	0/1:10,0:10:6.86:43,0,7	1/1:15,0:14:39.27:257,39,0	1/1:5,1:5:11.59:78,12,0	1/1:6,0:6:14.51:84,15,0
chr10	10077447	.	CGTCGTCGTCG	C	2154.91	PASS	AB=0.972;AC=17;AF=0.327;AN=52;BaseQRankSum=5.168;DP=341;FS=27.619;HRun=0;HaplotypeScore=134.0565;InbreedingCoeff=-0.2982;MQ=30.94;MQ0=14;MQRankSum=0.390;QD=11.71;ReadPosRankSum=3.668;VQSLOD=0.9499;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:15,0:14:46.71:47,0,247	./.	0/0:21,0:3:0:0,0,0	0/0:15,0:1:0.89:0,1,2	0/1:6,0:6:0.19:1,0,0	0/0:9,0:8:4.74:0,5,94	0/0:36,0:29:10.30:0,10,214	0/0:10,0:9:27.09:0,27,585	0/0:24,0:24:9.95:0,10,295	0/1:16,1:14:88.15:88,0,696	0/1:12,0:11:38.78:197,0,39	0/1:10,2:12:99:199,0,161	0/1:6,0:6:10.48:133,0,10	./.	0/1:7,1:7:36.26:148,0,36	1/1:7,0:7:13.60:269,14,0	0/1:10,0:10:99:123,0,230	0/0:9,0:8:5.77:0,6,249	0/0:9,0:7:21.07:0,21,453	0/1:12,0:12:99:243,0,159	0/0:5,0:4:6.02:0,6,89	0/1:15,0:13:99:183,0,113	0/1:21,0:21:96.33:96,0,524	0/1:11,0:11:65.05:65,0,90	0/0:11,0:11:8.77:0,9,213	0/1:17,0:16:99:208,0,526	0/1:7,1:7:51.85:52,0,133	0/1:7,0:6:20.58:248,0,21
chr10	10078469	.	GC	G	20855.14	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=13.964;DP=700;FS=11.607;HRun=1;HaplotypeScore=104.5236;InbreedingCoeff=0.9995;MQ=61.91;MQ0=0;MQRankSum=2.367;QD=39.13;ReadPosRankSum=3.883;VQSLOD=4.1026;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,51:51:99:2014,144,0	1/1:0,11:11:30.10:420,30,0	0/0:24,0:21:60.06:0,60,818	0/0:22,0:20:60.19:0,60,906	0/0:22,0:22:63.21:0,63,1006	0/0:22,0:22:66.23:0,66,1055	0/0:31,0:31:93.29:0,93,1415	1/1:0,20:20:60.19:821,60,0	0/0:17,0:17:51.16:0,51,787	1/1:0,40:40:99:1662,120,0	1/1:0,14:14:39.13:545,39,0	1/1:0,28:28:75.25:1049,75,0	1/1:0,25:25:66.22:923,66,0	1/1:0,23:23:66.22:922,66,0	1/1:0,21:21:60.20:839,60,0	1/1:1,24:25:24.27:917,24,0	1/1:0,27:27:78.26:1091,78,0	1/1:0,27:27:75.25:1049,75,0	1/1:0,26:26:69.21:935,69,0	1/1:0,30:30:81.27:1125,81,0	1/1:0,20:20:54.18:755,54,0	1/1:0,30:30:81.27:1133,81,0	1/1:0,20:20:60.20:839,60,0	1/1:0,33:33:96.32:1343,96,0	0/0:29,0:29:87.30:0,87,1391	1/1:0,23:23:69.23:964,69,0	1/1:0,28:28:75.25:1049,75,0	1/1:0,11:11:33.11:461,33,0
chr10	10080543	.	GCACACACATGCACGTGCACACACACACACACA	G	1212.17	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=2.803;DP=565;FS=3.572;HRun=0;HaplotypeScore=390.5284;InbreedingCoeff=0.7913;MQ=52.32;MQ0=9;MQRankSum=-3.244;QD=22.87;ReadPosRankSum=0.752;VQSLOD=1.1990;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:47.90:0,48,2486	0/0:14,0:14:33.11:0,33,2486	0/0:27,0:11:6.89:0,7,332	0/0:33,0:12:18.48:0,18,552	0/0:9,0:9:18.06:0,18,1730	1/1:2,10:12:3.01:248,3,0	1/1:17,0:17:2.20:85,2,0	0/0:29,0:26:75.24:0,75,3388	1/1:1,23:24:12.04:994,12,0	0/0:30,0:30:72.09:0,72,4897	0/0:7,0:7:15.05:0,15,1428	0/0:20,0:20:38.73:0,39,2409	0/0:21,0:21:48.16:0,48,3166	0/0:19,0:19:39.13:0,39,2656	0/0:17,0:17:36.11:0,36,2482	0/0:15,0:15:18.06:0,18,1137	0/0:18,0:18:36.12:0,36,2089	0/0:12,0:12:22.32:0,22,1244	0/0:17,0:15:42.14:0,42,2653	0/0:22,0:22:45.14:0,45,3528	0/0:31,0:30:53.78:0,54,3708	0/0:24,0:24:45.15:0,45,3544	0/0:16,0:16:21.07:0,21,1298	0/0:36,0:35:39.31:0,39,1951	0/0:15,0:15:27.09:0,27,2282	0/0:26,0:26:63.21:0,63,4436	0/0:13,0:13:30.10:0,30,1812	0/0:9,0:9:24.08:0,24,1822
chr10	10080551	.	ATGCACGTG	A	272.04	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=4.005;DP=548;FS=7.242;HRun=0;HaplotypeScore=183.3800;InbreedingCoeff=0.8017;MQ=49.06;MQ0=11;MQRankSum=-3.700;QD=6.33;ReadPosRankSum=0.673;VQSLOD=1.8701;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:47.76:0,48,1456	0/0:13,0:13:33.48:0,33,1029	0/0:22,0:8:6.88:0,7,210	0/0:28,0:9:17.43:0,17,362	0/0:9,0:9:21.07:0,21,870	1/1:10,0:10:3.01:60,3,0	1/1:1,9:10:3.01:87,3,0	0/0:33,0:28:84.27:0,84,2631	1/1:23,0:23:12.04:241,12,0	0/0:28,0:27:75.29:0,75,2407	0/0:7,0:7:15.05:0,15,513	0/0:22,0:22:30.03:0,30,946	0/0:20,0:21:28.66:0,29,686	0/0:20,0:20:36.36:0,36,839	0/0:18,0:17:35.89:0,36,1069	0/0:18,0:18:18.06:0,18,451	0/0:16,0:16:34.35:0,34,1028	0/0:11,0:11:23.91:0,24,523	0/0:19,0:16:48.16:0,48,1599	0/0:19,0:19:45.14:0,45,1470	0/0:31,0:30:53.96:0,54,1937	0/0:24,0:24:44.36:0,44,1639	0/0:15,0:15:19.40:0,19,521	0/0:37,0:36:34.69:0,35,1130	0/0:14,0:14:27.09:0,27,1068	0/0:25,0:25:70.19:0,70,2047	0/0:13,0:13:33.11:0,33,882	0/0:10,0:10:29.93:0,30,865
chr10	10080559	.	GCACACACA	G	2681.18	PASS	AB=0.815;AC=34;AF=0.654;AN=52;BaseQRankSum=4.158;DP=521;FS=8.310;HRun=0;HaplotypeScore=159.7295;InbreedingCoeff=0.2670;MQ=45.73;MQ0=13;MQRankSum=-3.148;QD=7.45;ReadPosRankSum=1.081;VQSLOD=1.9086;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:23,10:33:5.69:129,6,0	1/1:9,1:12:5.53:97,6,0	./.	./.	0/0:9,0:9:12.04:0,12,402	1/1:10,0:10:3.01:56,3,0	0/0:12,0:12:2.81:0,3,61	0/0:25,0:20:11.07:0,11,134	1/1:23,0:23:12.04:223,12,0	1/1:20,1:24:14.72:178,15,0	1/1:5,0:6:2.90:16,3,0	1/1:12,8:20:6.02:151,6,0	1/1:7,12:20:30.02:697,30,0	1/1:8,10:20:21.07:469,21,0	1/1:10,1:15:11.69:122,12,0	1/1:9,0:22:5.77:32,6,0	0/1:9,2:12:9.88:10,0,14	0/1:7,0:9:30.61:59,0,31	0/0:22,0:17:5.97:0,6,59	0/1:15,0:17:6.78:7,0,60	0/0:28,1:34:5.99:0,6,50	1/1:15,5:22:6.40:93,6,0	1/1:7,5:14:6.02:151,6,0	0/1:20,12:34:12.08:69,0,12	0/0:15,0:15:6.02:0,6,167	0/1:18,1:22:46.19:102,0,46	1/1:6,0:11:8.66:47,9,0	0/1:8,2:10:29.35:139,0,29
chr10	10080671	.	AAAGG	A	7616.03	PASS	AB=0.964;AC=28;AF=0.500;AN=56;BaseQRankSum=-10.609;DP=636;FS=0.784;HRun=0;HaplotypeScore=134.4901;InbreedingCoeff=0.1480;MQ=55.41;MQ0=11;MQRankSum=-0.042;QD=16.34;ReadPosRankSum=2.377;VQSLOD=4.1653;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,33:36:36.12:607,36,0	0/1:12,0:12:59.01:71,0,59	0/1:23,0:6:1.23:1,0,48	0/0:26,0:14:20.98:0,21,245	0/1:17,0:17:36.32:65,0,36	0/0:20,0:20:13.86:0,14,320	0/0:21,0:21:33.84:0,34,458	0/1:31,0:26:99:449,0,202	0/1:24,0:24:12.07:12,0,294	0/1:34,0:34:99:312,0,195	0/1:17,0:17:60.94:61,0,89	1/1:3,24:27:27.08:427,27,0	1/1:1,17:18:30.10:503,30,0	1/1:10,7:17:48.16:783,48,0	0/0:25,0:25:34.21:0,34,189	0/1:21,0:21:15.59:16,0,92	0/0:37,0:37:26.37:0,26,159	0/0:24,0:24:23.68:0,24,208	0/1:6,11:16:16.23:306,0,16	0/1:35,0:35:99:559,0,308	0/1:26,1:27:99:309,0,138	1/1:12,7:19:48.16:812,48,0	1/1:19,4:23:51.17:835,51,0	1/1:21,10:31:64.18:1090,64,0	1/1:12,0:11:19.20:148,19,0	0/1:25,0:25:99:251,0,173	0/0:11,0:11:11.67:0,12,67	0/0:6,0:6:2.96:0,3,19
chr10	10080680	.	A	AAGGG	8828.10	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=-9.578;DP=651;FS=1.172;HRun=0;HaplotypeScore=131.9334;InbreedingCoeff=0.4091;MQ=54.45;MQ0=10;MQRankSum=4.597;QD=20.67;ReadPosRankSum=0.430;VQSLOD=4.8006;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:19.17:0,19,286	1/1:1,10:12:26.79:512,27,0	0/0:18,0:4:6.86:0,7,73	0/0:24,0:7:20.82:0,21,236	0/0:16,0:18:26.32:0,26,273	0/0:22,0:22:45.15:0,45,808	0/0:24,0:24:38.83:0,39,728	0/1:34,0:27:99:347,0,266	0/0:24,0:24:45.15:0,45,806	1/1:4,31:37:36.71:1407,37,0	1/1:0,16:16:35.91:651,36,0	0/0:26,0:26:27.42:0,27,233	0/0:19,0:19:35.92:0,36,303	0/1:17,0:17:99:132,0,144	1/1:0,25:25:36.12:936,36,0	1/1:1,21:23:26.82:652,27,0	1/1:3,31:36:30.07:748,30,0	1/1:2,17:21:5.09:600,5,0	1/1:19,0:17:17.18:203,17,0	0/1:34,0:34:84.88:254,0,85	0/1:25,0:25:45.57:162,0,46	0/1:22,0:22:80.08:80,0,258	0/1:24,0:24:56.29:56,0,264	0/1:32,0:32:99:248,0,245	0/0:6,0:11:3.10:0,3,139	1/1:1,26:28:75.05:1446,75,0	1/1:3,11:14:7.61:315,8,0	1/1:0,7:8:3.01:81,3,0
chr10	10080688	.	GAGGA	G	1161.21	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=-2.035;DP=664;FS=3.392;HRun=0;HaplotypeScore=161.2685;InbreedingCoeff=0.2908;MQ=54.56;MQ0=6;MQRankSum=-3.498;QD=4.28;ReadPosRankSum=1.244;VQSLOD=2.1189;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:38,0:38:40:40,0,152	0/0:11,0:11:17.08:0,17,233	0/0:14,0:4:1.78:0,2,70	0/0:22,0:6:6.02:0,6,73	0/1:21,0:20:17.70:70,0,18	1/1:6,17:23:25.90:391,26,0	1/1:10,17:27:12.04:193,12,0	0/0:36,0:28:19.65:0,20,173	1/1:6,15:21:24.08:386,24,0	0/0:41,0:41:52.32:0,52,628	0/0:16,0:16:31.01:0,31,337	0/1:29,0:29:33.11:33,0,148	0/1:22,0:22:54.67:55,0,203	0/1:20,0:20:11.47:11,0,190	0/0:26,0:26:28.64:0,29,500	0/0:21,0:21:22.57:0,23,303	0/0:34,0:34:26.56:0,27,438	0/0:20,0:20:24.97:0,25,436	0/0:22,0:20:23.96:0,24,312	0/0:35,0:35:55.22:0,55,987	0/0:23,0:23:36.59:0,37,643	0/0:21,0:21:8.03:0,8,199	0/1:24,0:24:9.15:9,0,261	0/1:35,0:35:8.89:9,0,295	1/1:11,0:10:9.78:136,10,0	0/0:29,0:29:52.57:0,53,686	0/0:15,0:15:12.46:0,12,162	0/0:6,0:6:3.01:0,3,49
chr10	10081059	.	TAAA	T	5214.07	PASS	AB=0.622;AC=43;AF=0.768;AN=56;BaseQRankSum=-3.353;DP=480;FS=0.000;HRun=15;HaplotypeScore=79.6256;InbreedingCoeff=0.7928;MQ=74.51;MQ0=4;MQRankSum=-0.581;QD=13.00;ReadPosRankSum=5.382;VQSLOD=2.3762;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,17:27:29:278,29,0	1/1:6,8:15:18.49:214,18,0	0/0:13,0:10:11.71:0,12,83	0/0:19,0:16:11.69:0,12,124	0/1:11,0:28:10.10:10,0,193	0/0:4,0:10:14.92:0,15,111	0/0:7,1:18:4.79:0,5,282	1/1:13,14:27:23.36:224,23,0	0/0:7,0:10:19.27:0,19,213	1/1:7,13:20:38.71:392,39,0	1/1:7,8:15:12.47:158,12,0	1/1:7,10:19:24.50:264,24,0	1/1:4,6:10:8.96:101,9,0	1/1:5,11:17:23.97:269,24,0	1/1:3,8:12:13.46:165,13,0	1/1:1,7:8:15.04:168,15,0	1/1:7,15:25:37.42:387,37,0	1/1:7,15:22:35.93:388,36,0	1/1:4,6:10:14.91:159,15,0	1/1:4,13:19:28.29:315,28,0	1/1:1,4:5:9.03:101,9,0	1/1:7,13:23:20.48:290,20,0	1/1:5,9:14:9.89:131,10,0	1/1:6,14:20:31.94:343,32,0	0/0:4,1:8:5.77:0,6,26	1/1:8,12:21:28.37:323,28,0	1/1:9,15:26:30.28:317,30,0	1/1:3,10:15:19.40:217,19,0
chr10	10081569	.	A	AG	5195.61	PASS	AB=0.789;AC=28;AF=0.500;AN=56;BaseQRankSum=-8.505;DP=535;FS=11.261;HRun=9;HaplotypeScore=68.4556;InbreedingCoeff=0.7519;MQ=86.00;MQ0=0;MQRankSum=-2.140;QD=16.71;ReadPosRankSum=0.185;VQSLOD=3.8525;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,18:20:51.14:564,51,0	0/0:10,0:10:26.99:0,27,234	0/1:32,1:34:5.93:6,0,370	0/1:13,0:14:20.63:21,0,137	0/0:15,0:15:35.99:0,36,312	1/1:6,10:17:9.79:303,10,0	1/1:5,18:25:24.91:486,25,0	1/1:12,5:17:15.04:166,15,0	1/1:9,13:22:33.09:365,33,0	0/0:28,1:29:38.79:0,39,566	0/0:12,0:12:20.98:0,21,182	1/1:6,16:22:51.13:559,51,0	1/1:7,8:15:20.90:225,21,0	0/1:7,15:22:6.90:386,0,7	0/0:16,0:16:47.96:0,48,408	0/0:22,0:22:53.99:0,54,469	0/0:34,0:34:95.95:0,96,828	0/0:19,0:20:44.01:0,44,371	1/1:4,6:10:18.03:190,18,0	0/1:4,9:13:2:200,0,2	1/1:4,24:28:54.08:582,54,0	1/1:8,3:11:12.03:131,12,0	1/1:3,10:13:20.97:216,21,0	1/1:2,26:28:71.91:796,72,0	0/0:21,1:22:20.67:0,21,398	0/0:11,0:11:23.98:0,24,208	0/0:17,0:17:41.67:0,42,364	0/0:16,0:16:38.98:0,39,339
chr10	10081756	.	T	TACAC	10583.75	PASS	AB=0.592;AC=41;AF=0.732;AN=56;BaseQRankSum=2.102;DP=739;FS=12.357;HRun=0;HaplotypeScore=139.1575;InbreedingCoeff=0.5487;MQ=69.96;MQ0=4;MQRankSum=1.773;QD=18.22;ReadPosRankSum=3.586;VQSLOD=4.1536;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:12,0:40:44.82:168,0,45	1/1:3,10:14:15.05:371,15,0	0/0:47,0:36:4.18:0,4,417	0/0:28,0:17:19.64:0,20,220	1/1:3,0:26:52.47:298,52,0	0/0:21,0:22:63.11:0,63,959	0/0:32,0:34:75.09:0,75,1046	1/1:10,0:23:36.21:209,36,0	0/0:25,0:26:51.17:0,51,822	1/1:5,16:23:54.12:1033,54,0	1/1:2,10:12:9.03:196,9,0	1/1:8,0:30:49.46:224,49,0	1/1:6,0:26:32.67:149,33,0	0/1:4,0:31:0.61:162,0,1	1/1:3,13:16:27.09:667,27,0	1/1:5,12:17:33.11:816,33,0	1/1:8,39:49:87.30:2087,87,0	1/1:4,26:33:62.95:1429,63,0	0/1:8,0:16:10.08:53,0,10	1/1:4,0:18:26.26:116,26,0	0/1:13,0:55:5.48:230,0,5	1/1:3,0:20:32.69:146,33,0	1/1:4,0:19:13.76:137,14,0	1/1:7,0:34:52.35:249,52,0	0/1:7,0:24:24.78:83,0,25	1/1:11,16:28:54.14:1094,54,0	1/1:2,12:14:12.04:296,12,0	1/1:3,5:9:15.05:371,15,0
chr10	10082865	.	T	TACACACACACACACACACACAC	34830.19	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=1.305;DP=713;FS=1.746;HRun=0;HaplotypeScore=322.1915;InbreedingCoeff=0.7743;MQ=52.42;MQ0=3;MQRankSum=-6.131;QD=54.08;ReadPosRankSum=4.670;VQSLOD=3.0430;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:39:11.13:443,11,0	1/1:4,0:6:2.96:151,3,0	0/0:36,0:29:39.05:0,39,1069	0/0:33,0:22:31.80:0,32,918	1/1:9,0:21:6.02:400,6,0	1/1:16,0:14:18.05:1175,18,0	1/1:36,0:35:51.09:2504,51,0	1/1:44,0:39:69.21:2417,69,0	1/1:16,3:24:21.07:2082,21,0	1/1:9,0:21:39.57:1665,40,0	1/1:5,0:20:27.09:1415,27,0	1/1:12,0:31:33.11:1355,33,0	1/1:6,0:22:31.05:1208,31,0	1/1:11,0:26:27.09:1173,27,0	1/1:12,0:29:45.15:2394,45,0	1/1:6,0:23:33.11:1815,33,0	1/1:8,0:27:15.05:886,15,0	1/1:7,0:15:12.04:549,12,0	1/1:7,0:22:51.15:1775,51,0	1/1:12,0:24:12.04:602,12,0	1/1:18,0:18:15.42:320,15,0	1/1:20,0:36:27.09:1170,27,0	1/1:12,0:26:28.50:1325,29,0	1/1:14,0:27:21.51:1058,22,0	1/1:9,0:26:21.03:1650,21,0	1/1:26,0:25:66.20:2911,66,0	1/1:9,0:21:25.61:1889,26,0	1/1:3,0:12:6.02:498,6,0
chr10	10085524	.	GTATATA	G	685.67	PASS	AB=0.632;AC=7;AF=0.140;AN=50;BaseQRankSum=-3.967;DP=240;FS=14.754;HRun=0;HaplotypeScore=72.9138;InbreedingCoeff=0.3780;MQ=64.46;MQ0=2;MQRankSum=1.168;QD=13.99;ReadPosRankSum=3.178;VQSLOD=1.2064;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:9.01:0,9,83	0/0:7,0:7:8.80:0,9,68	0/0:16,0:10:2.04:0,2,6	0/0:12,0:7:2.79:0,3,32	1/1:2,6:8:12.04:257,12,0	0/1:5,2:12:8.90:122,0,9	0/0:6,0:11:0.06:0,0,33	0/0:44,0:43:83.56:0,84,670	1/1:4,0:12:7.91:71,8,0	0/0:6,0:6:7.61:0,8,29	0/0:3,0:3:6.01:0,6,55	0/0:5,0:5:4.82:0,5,30	0/0:8,0:8:6.01:0,6,55	0/0:2,0:2:4.82:0,5,32	0/0:4,0:4:3:0,3,28	0/0:4,0:4:6.01:0,6,55	0/0:11,0:11:10.67:0,11,87	0/0:10,0:10:11.09:0,11,61	0/0:6,0:6:5.49:0,5,24	0/0:3,0:3:1.82:0,2,5	./.	0/0:4,0:4:3:0,3,26	./.	./.	1/1:5,11:17:18.06:362,18,0	0/0:8,0:8:9.94:0,10,52	0/0:4,0:4:2.74:0,3,12	0/0:4,0:4:5.80:0,6,40
chr10	10085532	.	A	AG	414.12	PASS	AB=0.994;AC=23;AF=0.426;AN=54;BaseQRankSum=-3.577;DP=241;FS=48.338;HRun=0;HaplotypeScore=60.8837;InbreedingCoeff=0.2114;MQ=54.76;MQ0=3;MQRankSum=-1.925;QD=2.94;ReadPosRankSum=-0.195;VQSLOD=0.9309;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,0:7:11.70:73,12,0	0/1:6,0:6:25.11:39,0,25	0/0:11,0:5:11.72:0,12,102	0/0:12,0:4:8.05:0,8,74	0/0:9,0:9:22.75:0,23,208	0/0:15,0:15:37.46:0,37,318	0/0:8,0:8:17.32:0,17,137	0/1:49,3:51:43.19:43,0,631	0/0:10,0:10:22.85:0,23,156	0/0:7,1:8:6.92:0,7,89	0/1:5,0:5:6.95:29,0,7	1/1:5,0:5:11.31:58,11,0	1/1:5,0:5:5.93:40,6,0	0/1:3,0:3:0.73:24,0,1	1/1:5,0:5:8.46:44,8,0	1/1:3,0:3:5.93:40,6,0	0/1:15,0:14:13.59:82,0,14	0/1:16,0:16:35.47:35,0,93	0/0:4,0:4:8.86:0,9,75	0/1:4,0:4:5.62:6,0,23	0/0:1,0:1:2.68:0,3,11	1/1:1,0:1:2.74:12,3,0	./.	1/1:2,0:2:2.84:14,3,0	0/0:15,0:15:25.12:0,25,191	0/1:6,0:6:28.67:31,0,29	0/0:7,0:7:5.87:0,6,35	0/1:6,0:6:12.38:12,0,19
chr10	10085533	.	TA	T	3814.20	PASS	AB=0.571;AC=39;AF=0.722;AN=54;BaseQRankSum=2.344;DP=243;FS=0.000;HRun=1;HaplotypeScore=48.3405;InbreedingCoeff=0.5927;MQ=56.02;MQ0=3;MQRankSum=-4.824;QD=23.54;ReadPosRankSum=5.484;VQSLOD=3.4831;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,4:7:15.05:200,15,0	1/1:1,0:7:12.02:138,12,0	0/0:10,0:4:8.89:0,9,65	0/0:13,0:5:6.02:0,6,68	0/0:9,0:9:6.78:0,7,143	0/0:16,0:16:21.65:0,22,236	0/0:8,0:8:10.23:0,10,117	1/1:11,20:51:99:1166,123,0	0/0:10,0:10:6.12:0,6,38	0/1:2,3:8:16.97:160,0,17	1/1:0,3:5:12.04:160,12,0	1/1:0,5:5:12.04:160,12,0	1/1:0,0:5:6.02:80,6,0	1/1:0,2:3:9.03:120,9,0	1/1:0,4:5:12:140,12,0	1/1:0,0:3:6.02:80,6,0	1/1:0,10:14:26.60:340,27,0	1/1:2,11:16:37.58:437,38,0	1/1:1,0:4:4.49:37,4,0	1/1:0,4:4:6.02:80,6,0	1/1:0,1:1:3.01:40,3,0	1/1:0,1:1:3.01:40,3,0	./.	1/1:0,2:2:3.01:40,3,0	0/0:15,0:15:1.39:0,1,101	1/1:0,1:6:14.99:163,15,0	1/1:0,6:7:8.96:82,9,0	1/1:0,5:6:12.04:151,12,0
chr10	10085727	.	T	TACAC	4469.35	PASS	AB=0.757;AC=47;AF=0.904;AN=52;BaseQRankSum=-1.125;DP=522;FS=0.000;HRun=0;HaplotypeScore=98.3360;InbreedingCoeff=0.0961;MQ=64.99;MQ0=14;MQRankSum=1.042;QD=9.89;ReadPosRankSum=0.725;VQSLOD=3.9065;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:21,15:40:9.03:212,9,0	1/1:4,0:4:6.02:81,6,0	./.	./.	1/1:8,0:11:2.74:12,3,0	1/1:9,7:20:11.87:226,12,0	0/1:17,7:26:13.28:233,0,13	0/0:23,0:22:2.28:0,2,28	1/1:18,5:24:12.04:244,12,0	1/1:17,0:17:18.05:261,18,0	1/1:4,2:5:3.01:70,3,0	1/1:11,6:21:8.73:153,9,0	1/1:4,5:10:9.03:211,9,0	1/1:10,6:18:6.02:141,6,0	1/1:9,7:19:9.03:211,9,0	1/1:6,2:11:5.75:82,6,0	1/1:11,13:27:11.78:224,12,0	1/1:11,9:27:24.02:448,24,0	1/1:12,0:11:0.47:1,0,0	1/1:4,0:8:5.49:24,5,0	0/1:17,0:25:15.87:16,0,38	1/1:6,3:10:8.85:211,9,0	1/1:6,3:10:2.72:62,3,0	1/1:18,17:39:24.08:563,24,0	0/1:14,0:21:22.86:23,0,78	1/1:15,0:15:18.90:223,19,0	1/1:10,7:18:20.80:313,21,0	1/1:6,0:6:15.02:223,15,0
chr10	10085991	.	A	ACC	22227.41	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=-15.112;DP=634;FS=1.960;HRun=2;HaplotypeScore=67.1961;InbreedingCoeff=0.9818;MQ=85.42;MQ0=0;MQRankSum=-3.540;QD=47.09;ReadPosRankSum=3.303;VQSLOD=4.9218;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,42:45:99:2070,111,0	1/1:0,5:5:15.05:281,15,0	0/0:26,0:26:72.05:0,72,966	0/0:24,0:24:69.19:0,69,934	0/0:11,0:11:33.11:0,33,483	0/0:31,0:31:87.29:0,87,1280	0/0:30,0:30:81.24:0,81,1153	1/1:1,25:27:72.21:1198,72,0	0/0:21,0:21:63.21:0,63,924	1/1:1,21:22:63.22:1176,63,0	1/1:1,13:14:36.12:671,36,0	1/1:5,23:29:66.23:1226,66,0	1/1:0,16:16:42.14:786,42,0	1/1:0,23:23:60.21:1123,60,0	1/1:0,26:26:69.24:1293,69,0	1/1:1,18:20:13.02:968,13,0	1/1:0,32:32:90.30:1657,90,0	1/1:1,11:12:27.09:506,27,0	1/1:5,28:33:84.22:1513,84,0	1/1:2,12:15:33.11:617,33,0	1/1:0,35:35:87.30:1630,87,0	1/1:1,20:21:54.19:1008,54,0	1/1:1,17:18:45.15:826,45,0	1/1:4,24:29:66.23:1236,66,0	0/0:19,0:19:57.19:0,57,838	1/1:0,11:12:36.08:609,36,0	1/1:4,31:35:90.31:1668,90,0	1/1:0,3:3:9.03:169,9,0
chr10	10086784	.	A	AAC	13077.52	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=-2.750;DP=524;FS=5.839;HRun=0;HaplotypeScore=89.4415;InbreedingCoeff=0.9482;MQ=62.54;MQ0=13;MQRankSum=-1.432;QD=33.28;ReadPosRankSum=-0.588;VQSLOD=6.9148;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,21:24:3.01:36,3,0	1/1:8,0:8:21.07:340,21,0	0/0:29,0:17:33.21:0,33,564	0/0:17,0:10:23.97:0,24,323	0/0:13,0:13:26.69:0,27,370	0/0:20,0:20:51.17:0,51,728	0/0:20,0:20:54.17:0,54,755	1/1:37,0:37:99:1695,101,0	0/0:22,0:21:49.21:0,49,695	1/1:23,0:22:54.11:850,54,0	1/1:16,0:16:42.57:605,43,0	1/1:26,0:26:69.21:1027,69,0	1/1:0,15:15:6.02:112,6,0	1/1:15,0:15:27.07:404,27,0	1/1:20,0:20:54.18:879,54,0	1/1:18,0:18:48.14:732,48,0	1/1:16,0:16:36.01:538,36,0	1/1:13,0:13:33.08:494,33,0	1/1:20,0:18:48.09:683,48,0	1/1:16,0:15:38.79:535,39,0	1/1:24,0:24:39.13:631,39,0	1/1:13,0:13:27.09:424,27,0	1/1:21,0:20:43.71:693,44,0	1/1:30,0:30:60.07:938,60,0	0/0:10,0:10:30.10:0,30,425	1/1:12,0:13:33.10:512,33,0	1/1:16,0:16:44.77:581,45,0	1/1:9,0:8:24.08:370,24,0
chr10	10086786	.	C	CAC	13077.71	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=-2.809;DP=582;FS=6.680;HRun=0;HaplotypeScore=119.6210;InbreedingCoeff=0.9481;MQ=58.93;MQ0=19;MQRankSum=-1.055;QD=29.72;ReadPosRankSum=-0.777;VQSLOD=6.1942;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:26:3.01:36,3,0	1/1:9,0:9:21.07:340,21,0	0/0:28,0:16:33.21:0,33,564	0/0:17,0:10:23.97:0,24,323	0/0:16,0:16:26.69:0,27,370	0/0:19,0:19:51.17:0,51,728	0/0:25,0:28:53.86:0,54,754	1/1:42,0:39:99:1695,101,0	0/0:23,0:22:50.71:0,51,704	1/1:25,0:24:53.50:849,53,0	1/1:16,0:16:42.57:605,43,0	1/1:29,0:29:69.21:1027,69,0	1/1:19,0:19:6.01:112,6,0	1/1:17,0:17:27.07:404,27,0	1/1:20,0:20:54.18:879,54,0	1/1:24,0:24:48.13:732,48,0	1/1:16,0:16:36.01:538,36,0	1/1:15,0:15:33.08:494,33,0	1/1:7,14:20:48.09:683,48,0	1/1:18,0:17:38.73:535,39,0	1/1:26,0:26:39.13:631,39,0	1/1:17,0:16:27.09:424,27,0	1/1:21,0:19:43.71:693,44,0	1/1:32,0:32:60.07:938,60,0	0/0:11,0:11:30.10:0,30,425	1/1:16,0:16:33.10:512,33,0	1/1:18,0:18:44.77:581,45,0	1/1:11,0:9:24.08:370,24,0
chr10	10086842	.	T	TTA	7418.55	PASS	AB=0.781;AC=40;AF=0.714;AN=56;BaseQRankSum=8.872;DP=483;FS=17.460;HRun=0;HaplotypeScore=91.5356;InbreedingCoeff=0.7448;MQ=80.85;MQ0=10;MQRankSum=-6.544;QD=23.40;ReadPosRankSum=-1.186;VQSLOD=3.6262;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,24:25:6.02:75,6,0	1/1:3,0:3:9.03:148,9,0	0/0:25,0:20:45.07:0,45,656	0/0:34,0:25:61.34:0,61,793	0/0:15,0:15:33.11:0,33,500	0/0:18,0:18:51.16:0,51,758	0/0:21,0:21:46.03:0,46,672	1/1:20,0:20:57.19:847,57,0	0/0:30,0:30:83.30:0,83,1203	1/1:15,0:15:45.14:652,45,0	1/1:18,0:17:49.39:693,49,0	1/1:15,0:15:38.97:563,39,0	1/1:18,1:19:36.90:712,37,0	1/1:7,0:6:12.04:174,12,0	1/1:1,19:20:4.26:40,4,0	0/1:21,0:21:3.55:67,0,4	1/1:10,0:9:5.97:44,6,0	0/1:2,7:9:5.97:26,0,6	1/1:9,0:9:24.06:339,24,0	1/1:16,0:15:42.14:680,42,0	1/1:17,0:17:9.03:110,9,0	1/1:13,2:14:42.13:635,42,0	1/1:16,0:15:39.12:517,39,0	1/1:25,0:25:0.11:0,0,0	0/0:23,0:23:56.83:0,57,856	1/1:0,19:19:57.17:872,57,0	1/1:13,0:13:5.97:97,6,0	1/1:5,0:3:9.03:129,9,0
chr10	10086843	.	C	CTTAA	12709.53	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=0.864;DP=503;FS=2.513;HRun=0;HaplotypeScore=91.0256;InbreedingCoeff=0.8604;MQ=83.48;MQ0=9;MQRankSum=-7.945;QD=38.51;ReadPosRankSum=-2.772;VQSLOD=4.5371;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:26:9.01:133,9,0	1/1:4,0:4:12.04:281,12,0	0/0:28,0:23:53.99:0,54,915	0/0:36,0:27:53.24:0,53,1020	0/0:15,0:15:36.08:0,36,687	0/0:19,0:19:51.17:0,51,1023	0/0:21,0:21:46.95:0,47,892	1/1:23,0:23:69.23:1527,69,0	0/0:31,0:31:84.06:0,84,1589	1/1:20,0:20:60.21:1311,60,0	1/1:19,0:18:51.65:1105,52,0	1/1:15,0:15:42.13:869,42,0	1/1:18,1:19:57.07:1155,57,0	1/1:7,0:6:18.05:342,18,0	1/1:19,0:19:3.01:56,3,0	1/1:0,13:14:5.97:112,6,0	1/1:3,7:13:8.99:194,9,0	1/1:11,0:11:11.33:111,11,0	1/1:10,0:10:30.08:603,30,0	1/1:16,0:15:45.14:1049,45,0	1/1:2,16:18:15.01:241,15,0	1/1:17,0:16:48.16:1078,48,0	1/1:16,0:15:45.12:834,45,0	1/1:0,21:22:0.26:2,0,0	0/0:23,0:23:56.89:0,57,1146	1/1:22,0:22:60.21:1403,60,0	1/1:2,12:14:5.98:108,6,0	1/1:4,0:3:9.03:196,9,0
chr10	10090821	.	TAC	T	16892.36	PASS	AB=0.764;AC=45;AF=0.804;AN=56;BaseQRankSum=-2.188;DP=1168;FS=20.942;HRun=0;HaplotypeScore=271.8599;InbreedingCoeff=0.6591;MQ=54.82;MQ0=20;MQRankSum=3.884;QD=17.56;ReadPosRankSum=5.783;VQSLOD=3.6684;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:33,34:65:99:1490,129,0	1/1:7,4:10:17.97:184,18,0	0/0:56,0:30:32.41:0,32,395	0/0:56,0:35:56.94:0,57,704	1/1:13,21:33:32.93:376,33,0	0/1:37,1:36:8.64:9,0,393	0/0:41,1:43:23.74:0,24,715	1/1:28,8:33:38.93:434,39,0	0/0:49,0:47:10.18:0,10,889	1/1:35,30:63:19.95:1294,20,0	1/1:15,16:29:33.10:397,33,0	1/1:24,22:43:77.65:968,78,0	1/1:19,19:38:86.91:941,87,0	1/1:18,20:34:50.77:559,51,0	1/1:22,40:57:99:1131,101,0	1/1:16,29:42:65.73:730,66,0	1/1:16,12:27:46.98:517,47,0	0/1:10,13:22:13.05:461,0,13	1/1:21,5:22:9.73:399,10,0	1/1:16,28:43:62.67:689,63,0	1/1:40,35:69:99:1781,151,0	1/1:12,18:28:30.01:328,30,0	1/1:16,14:30:44.72:481,45,0	1/1:26,27:51:99:1182,105,0	1/1:14,14:25:39.03:434,39,0	0/1:28,22:50:17.40:915,0,17	1/1:13,23:37:80.25:845,80,0	1/1:3,8:12:30.06:346,30,0
chr10	10090898	.	CACAT	C	2003.29	PASS	AB=0.872;AC=10;AF=0.179;AN=56;BaseQRankSum=5.840;DP=1643;FS=40.181;HRun=0;HaplotypeScore=480.0313;InbreedingCoeff=-0.2272;MQ=44.12;MQ0=49;MQRankSum=-4.199;QD=3.39;ReadPosRankSum=-4.590;VQSLOD=-0.3976;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:47,6:50:63.09:0,63,1782	0/0:12,1:12:26.57:0,27,700	0/0:56,0:14:42.14:0,42,1020	0/0:46,0:18:54.07:0,54,1064	0/0:37,1:36:60.19:0,60,1636	0/1:42,16:52:99:202,0,1335	0/1:51,4:53:61.46:61,0,2246	0/0:69,0:45:90.06:0,90,2346	0/1:66,31:88:99:705,0,2057	0/1:100,12:106:99:375,0,5317	0/0:46,0:45:32.11:0,32,1699	0/0:60,3:58:91.32:0,91,2314	0/0:53,6:56:9.71:0,10,1501	0/0:57,4:57:72.87:0,73,1908	0/0:70,7:69:79.95:0,80,2064	0/0:54,3:52:81.54:0,82,1975	0/1:31,5:35:99:118,0,1465	0/1:33,4:34:13.09:13,0,2022	0/1:35,3:31:99:293,0,1447	0/1:59,25:82:99:311,0,1950	0/0:97,11:97:99:0,177,4596	0/0:47,6:49:3.33:0,3,1608	0/1:47,5:51:32.11:32,0,2287	0/0:43,6:45:73.85:0,74,1944	0/0:58,0:53:70.44:0,70,1961	0/0:93,0:89:99:0,155,5276	0/0:49,2:50:71.37:0,71,2557	0/1:21,1:20:36.61:37,0,809
chr10	10090963	.	CATAT	C	1128.98	PASS	AB=0.862;AC=12;AF=0.214;AN=56;BaseQRankSum=9.537;DP=1127;FS=42.858;HRun=0;HaplotypeScore=331.6316;InbreedingCoeff=-0.3008;MQ=38.09;MQ0=50;MQRankSum=-7.920;QD=2.04;ReadPosRankSum=0.579;VQSLOD=1.1082;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:32,1:29:9.57:10,0,277	0/0:13,2:14:6.15:0,6,169	0/0:43,1:9:23.57:0,24,491	0/0:46,0:13:8.52:0,9,293	0/0:24,6:28:24.08:0,24,565	0/0:15,6:19:4.80:0,5,147	0/0:21,3:20:26.64:0,27,528	0/0:67,3:40:98.68:0,99,2262	0/1:41,8:41:99:193,0,313	0/1:78,7:79:99:207,0,3684	0/0:27,8:32:11.72:0,12,276	0/1:31,10:36:18.94:19,0,446	0/1:34,6:36:50.98:51,0,436	0/0:39,6:40:25.84:0,26,579	0/1:41,12:44:62.58:63,0,295	0/1:29,7:31:27.24:27,0,297	0/0:22,0:21:14.03:0,14,648	0/1:21,0:19:47.53:48,0,802	0/0:28,0:21:24.15:0,24,1092	0/1:52,15:65:8.22:8,0,783	0/0:53,2:47:62.91:0,63,1492	0/0:40,10:48:35.80:0,36,794	0/0:30,10:38:29.79:0,30,674	0/0:29,1:26:17.80:0,18,399	0/1:32,14:40:33.76:34,0,350	0/1:48,7:51:99:383,0,1835	0/1:21,6:25:99:234,0,614	0/0:16,0:16:0.16:0,0,445
chr10	10090978	.	ATAC	A	1250.09	PASS	AB=0.959;AC=21;AF=0.375;AN=56;BaseQRankSum=-1.737;DP=1013;FS=6.692;HRun=0;HaplotypeScore=363.9428;InbreedingCoeff=-0.4623;MQ=38.00;MQ0=44;MQRankSum=-0.596;QD=1.76;ReadPosRankSum=3.779;VQSLOD=0.9197;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:22:24.70:27,0,25	1/1:14,1:14:5.36:43,5,0	0/0:43,0:14:32.70:0,33,517	0/0:46,0:17:19.59:0,20,549	0/0:28,2:29:16.92:0,17,156	0/0:24,0:22:16.49:0,16,194	0/0:25,0:20:17.36:0,17,226	0/1:52,1:24:22.89:23,0,258	0/0:48,0:43:57.99:0,58,555	0/1:72,3:71:99:448,0,1006	0/1:36,0:33:24.58:25,0,98	0/1:33,4:33:60.40:60,0,95	0/1:36,3:37:61.31:61,0,203	0/1:38,2:38:42.67:43,0,95	0/1:44,2:44:49.23:49,0,93	0/0:35,5:38:4.87:0,5,167	0/1:19,0:19:20.25:20,0,135	0/1:15,0:13:53.30:53,0,203	0/1:17,0:13:18.17:18,0,114	0/1:56,2:56:42.10:42,0,220	0/1:38,0:36:25.35:100,0,25	0/1:44,3:45:71.88:72,0,96	0/1:42,0:40:20.78:21,0,172	0/1:22,2:23:20.86:21,0,79	0/0:45,0:41:31.70:0,32,363	0/1:46,1:43:99:210,0,621	0/1:26,2:27:72.10:72,0,253	0/1:7,2:9:1.02:1,0,177
chr10	10090986	.	T	TAC	295.64	PASS	AB=0.959;AC=13;AF=0.232;AN=56;BaseQRankSum=5.692;DP=1095;FS=3.562;HRun=0;HaplotypeScore=453.4060;InbreedingCoeff=-0.1828;MQ=37.22;MQ0=54;MQRankSum=-4.578;QD=0.68;ReadPosRankSum=3.526;VQSLOD=0.7687;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:21:34.42:42,0,34	1/1:15,2:16:1.11:3,1,0	0/0:45,0:13:30.08:0,30,382	0/0:50,0:17:38.85:0,39,414	0/0:27,0:26:12.01:0,12,128	0/0:28,0:25:20.81:0,21,260	0/0:26,0:20:23.90:0,24,304	0/0:56,1:26:44.20:0,44,471	0/0:56,0:50:62.91:0,63,806	0/1:79,1:76:82.04:82,0,1410	0/0:37,4:38:14.65:0,15,185	0/0:42,3:41:11.09:0,11,153	0/1:45,1:42:20.80:21,0,325	0/1:41,2:41:36.98:37,0,128	0/0:42,1:42:4.11:0,4,77	0/0:47,2:47:38.95:0,39,445	0/0:17,1:18:21.08:0,21,246	0/1:15,1:14:4.39:4,0,293	0/1:12,2:8:68.80:69,0,122	0/0:52,1:51:15.96:0,16,236	0/1:44,1:41:13.99:14,0,71	0/1:47,1:46:31.35:31,0,201	0/0:43,3:44:26.92:0,27,312	0/0:24,2:24:9.26:0,9,120	0/0:49,0:46:41.40:0,41,527	0/1:49,5:51:99:106,0,994	0/1:31,2:32:25.05:25,0,437	0/1:17,0:17:2.27:2,0,184
chr10	10091026	.	TAC	T	10068.70	PASS	AB=0.711;AC=34;AF=0.607;AN=56;BaseQRankSum=-11.668;DP=1356;FS=2.322;HRun=0;HaplotypeScore=568.6171;InbreedingCoeff=-0.3392;MQ=34.99;MQ0=49;MQRankSum=9.308;QD=8.08;ReadPosRankSum=5.970;VQSLOD=3.3688;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,12:20:12.15:194,12,0	0/1:9,4:15:19.76:31,0,20	0/0:51,0:14:24.92:0,25,468	0/0:57,0:17:17.15:0,17,287	0/1:20,23:48:7.16:428,0,7	0/1:8,28:32:16.66:247,0,17	1/1:7,45:48:27.10:705,27,0	0/1:71,24:64:99:779,0,563	0/1:15,54:66:15.99:956,0,16	0/1:42,37:90:99:1279,0,522	0/1:18,14:33:27.18:252,0,27	0/1:17,18:38:39.41:115,0,39	0/1:22,28:54:46.40:364,0,46	0/1:27,24:57:34.28:139,0,34	0/1:35,15:63:52.05:52,0,78	0/1:19,23:49:37.99:363,0,38	1/1:9,13:21:6.03:267,6,0	0/1:6,10:16:65.07:307,0,65	0/1:21,5:15:99:119,0,202	0/1:30,14:46:2.35:215,0,2	1/1:26,31:53:17.92:226,18,0	1/1:25,27:54:24.35:348,24,0	1/1:19,29:50:31.96:537,32,0	1/1:21,15:34:9.06:147,9,0	1/1:20,34:56:30.90:592,31,0	0/1:32,32:70:99:1025,0,270	0/1:17,14:44:99:153,0,241	0/1:7,7:17:99:228,0,105
chr10	10091035	.	ACG	A	4731.10	PASS	AB=0.974;AC=34;AF=0.607;AN=56;BaseQRankSum=-4.560;DP=1398;FS=18.071;HRun=0;HaplotypeScore=596.0750;InbreedingCoeff=-0.3705;MQ=34.90;MQ0=36;MQRankSum=9.301;QD=3.66;ReadPosRankSum=6.671;VQSLOD=-0.0633;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:22,1:22:0.54:100,0,1	0/1:14,0:14:11.49:11,0,50	0/0:52,0:12:6.12:0,6,497	0/0:52,0:14:11.61:0,12,237	0/1:50,0:49:19.77:158,0,20	1/1:34,1:30:1.67:119,2,0	1/1:53,0:49:49.94:355,50,0	0/1:120,0:75:99:283,0,1107	1/1:70,1:68:39.97:483,40,0	0/1:90,4:92:99:707,0,946	0/1:32,1:33:34.62:80,0,35	0/1:43,1:42:52.93:53,0,73	0/1:57,1:55:90.65:208,0,91	0/1:53,1:52:59.35:59,0,65	0/1:58,6:62:30.21:30,0,66	0/1:52,2:53:92.79:228,0,93	1/1:18,2:19:3.84:167,4,0	0/1:18,0:17:99:144,0,122	0/1:33,0:22:24.87:25,0,491	0/1:51,0:49:22.67:76,0,23	1/1:61,1:57:17.49:114,17,0	1/1:53,2:51:27.96:146,28,0	1/1:51,0:49:6.62:202,7,0	0/1:31,3:32:3.14:59,0,3	1/1:56,0:56:32.51:258,33,0	0/1:78,1:77:99:492,0,645	0/1:42,1:43:66:66,0,288	0/1:19,0:17:99:107,0,216
chr10	10091077	.	TATACAC	T	4670.87	PASS	AB=0.894;AC=31;AF=0.554;AN=56;BaseQRankSum=-6.123;DP=1279;FS=41.730;HRun=0;HaplotypeScore=569.6737;InbreedingCoeff=-0.0082;MQ=32.15;MQ0=48;MQRankSum=0.727;QD=4.53;ReadPosRankSum=-3.894;VQSLOD=-0.1504;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:21,7:26:21.77:98,0,22	1/1:10,1:11:10.94:108,11,0	0/0:44,0:10:13.33:0,13,535	0/0:45,0:11:30.10:0,30,647	0/1:44,5:48:25.19:39,0,25	0/1:23,14:34:5.59:58,0,6	1/1:24,3:25:5.85:118,6,0	0/1:70,0:49:37.69:38,0,83	1/1:51,24:73:21.38:384,21,0	0/1:70,15:79:99:1040,0,325	1/1:29,8:35:8.74:160,9,0	0/0:42,3:43:17.13:0,17,194	0/1:47,4:50:3:52,0,3	0/1:47,0:45:35.50:45,0,35	0/0:63,5:66:14.62:0,15,142	0/0:41,4:44:15.48:0,15,240	1/1:15,8:22:11.06:245,11,0	0/1:20,2:20:53.39:209,0,53	0/1:24,0:12:16.67:92,0,17	1/1:40,21:59:14.54:270,15,0	0/1:54,3:51:0.01:0,0,0	1/1:39,11:48:8.91:143,9,0	0/1:33,12:44:2.12:2,0,25	1/1:34,4:36:8.77:133,9,0	0/1:49,2:51:4.18:42,0,4	0/1:65,16:75:99:999,0,315	0/1:30,3:33:86.40:155,0,86	0/1:22,5:25:33.30:241,0,33
chr10	10091266	.	TAC	T	802.61	PASS	AB=0.661;AC=1;AF=0.018;AN=56;BaseQRankSum=6.934;DP=1494;FS=6.654;HRun=0;HaplotypeScore=367.8492;InbreedingCoeff=-0.0033;MQ=43.95;MQ0=28;MQRankSum=0.617;QD=19.58;ReadPosRankSum=-0.452;VQSLOD=2.8777;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:29.88:0,30,469	0/0:12,0:12:21.04:0,21,358	0/0:37,1:8:17.65:0,18,239	0/0:47,0:21:29.21:0,29,560	0/0:28,0:28:39.12:0,39,626	0/0:43,0:43:70.74:0,71,1143	0/0:45,0:42:82.55:0,83,1325	0/0:124,0:94:99:0,194,2839	0/0:85,0:85:99:0,137,2251	0/0:77,0:76:99:0,211,3313	0/0:27,0:26:33.11:0,33,556	0/0:57,0:57:35.77:0,36,559	0/0:59,0:59:25.40:0,25,730	0/0:56,0:56:53.76:0,54,863	0/0:85,0:85:45.59:0,46,616	0/0:44,0:44:50.76:0,51,811	0/1:20,21:40:20.14:877,0,20	0/0:47,0:47:99:0,112,1708	0/0:33,1:17:10:0,10,569	0/0:61,0:61:78.13:0,78,1267	0/0:107,0:107:99:0,202,3260	0/0:45,0:45:75.26:0,75,1274	0/0:46,0:46:81.08:0,81,1325	0/0:69,0:67:99:0,106,1785	0/0:48,0:48:73.46:0,73,1166	0/0:70,0:64:99:0,169,2664	0/0:41,0:41:71.53:0,72,1125	0/0:30,0:30:75.26:0,75,1281
chr10	10091419	.	CACACACATAT	C	20279.90	PASS	AB=0.815;AC=39;AF=0.696;AN=56;BaseQRankSum=-1.818;DP=957;FS=1.561;HRun=0;HaplotypeScore=356.6748;InbreedingCoeff=0.7185;MQ=45.30;MQ0=15;MQRankSum=-7.586;QD=31.10;ReadPosRankSum=0.465;VQSLOD=3.4175;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:28,12:40:33.73:569,34,0	1/1:9,5:14:18.06:287,18,0	0/0:60,0:24:54.04:0,54,1407	0/0:57,0:35:63.10:0,63,1776	0/0:35,0:35:39.39:0,39,1357	0/0:39,0:39:96.30:0,96,4066	0/0:26,0:26:59.74:0,60,1916	1/1:42,0:39:78.24:1410,78,0	0/0:42,0:42:99:0,108,4188	1/1:29,15:44:62.88:2122,63,0	1/1:22,2:24:18.90:331,19,0	1/1:8,34:42:63.21:1651,63,0	1/1:23,16:39:78.26:1716,78,0	1/1:7,29:36:47.84:1178,48,0	1/1:26,19:45:84.27:1956,84,0	1/1:20,11:31:63.19:1397,63,0	0/1:23,7:29:8.57:663,0,9	0/1:25,5:30:32.46:843,0,32	1/1:7,17:23:43.69:869,44,0	1/1:13,14:27:11.60:310,12,0	1/1:40,5:44:37.14:830,37,0	1/1:3,19:22:5.76:129,6,0	1/1:14,3:17:9.17:138,9,0	1/1:30,6:35:42.03:957,42,0	0/0:45,0:45:54.16:0,54,2279	0/1:20,8:28:15.28:1272,0,15	1/1:13,15:28:57.14:1517,57,0	1/1:0,7:7:8.96:135,9,0
chr10	10091449	.	T	TAC	4165.92	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=-12.331;DP=787;FS=3.113;HRun=0;HaplotypeScore=247.2786;InbreedingCoeff=0.8373;MQ=59.55;MQ0=3;MQRankSum=7.703;QD=28.73;ReadPosRankSum=1.837;VQSLOD=4.2069;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:75.48:0,75,941	0/0:10,0:10:18.01:0,18,233	0/1:43,0:36:4.62:5,0,613	0/0:33,0:24:18.67:0,19,376	0/0:27,0:27:36.10:0,36,454	1/1:10,24:34:90.27:1468,90,0	1/1:7,17:24:57.19:948,57,0	0/0:28,0:27:72.15:0,72,865	1/1:8,35:42:99:1746,105,0	0/0:33,0:33:87.19:0,87,1084	0/0:15,0:15:20.85:0,21,258	0/0:39,0:39:81.18:0,81,1010	0/0:32,0:32:81.18:0,81,1011	0/0:39,0:39:69.07:0,69,857	0/0:40,0:40:90.11:0,90,1115	0/0:25,0:25:69.21:0,69,877	0/0:25,0:24:32.64:0,33,386	0/0:21,0:20:36.08:0,36,445	0/0:18,0:18:39.13:0,39,502	0/0:18,0:18:10.31:0,10,151	0/0:39,0:39:56.95:0,57,678	0/0:14,0:14:9.03:0,9,115	0/0:15,0:15:27.06:0,27,333	0/0:29,0:29:32.12:0,32,399	0/0:40,0:40:54.17:0,54,699	0/0:20,0:20:53.79:0,54,647	0/0:23,0:23:66.21:0,66,849	0/0:9,0:9:18.02:0,18,215
chr10	10091663	.	C	CTCTTT	42624.75	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-4.395;DP=654;FS=10.652;HRun=0;HaplotypeScore=131.2984;InbreedingCoeff=0.9989;MQ=78.79;MQ0=0;MQRankSum=-10.161;QD=70.34;ReadPosRankSum=4.600;VQSLOD=6.0300;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,23:32:72.25:1980,72,0	1/1:1,9:10:27.09:741,27,0	0/0:22,0:22:48.15:0,48,925	0/0:26,0:26:63.18:0,63,1209	1/1:5,23:28:71.93:1767,72,0	1/1:1,17:18:51.17:1484,51,0	1/1:8,24:32:75.26:2060,75,0	1/1:12,14:29:81.17:2032,81,0	1/1:3,22:27:66.23:1976,66,0	1/1:4,18:22:57.20:1749,57,0	1/1:4,24:28:78.26:2173,78,0	1/1:4,24:30:72.25:2195,72,0	1/1:5,15:22:53.89:1509,54,0	1/1:4,21:25:60.21:1787,60,0	1/1:2,22:25:63.22:1894,63,0	1/1:1,17:19:48.16:1473,48,0	1/1:5,22:27:60.21:1715,60,0	1/1:5,12:18:45.15:1321,45,0	1/1:7,13:23:63.19:1728,63,0	1/1:8,22:30:75.26:2064,75,0	1/1:6,15:21:45.15:1157,45,0	1/1:3,18:21:57.19:1555,57,0	1/1:4,15:20:51.17:1460,51,0	1/1:1,22:23:48.16:1417,48,0	1/1:4,17:23:54.18:1496,54,0	1/1:3,18:23:63.16:1676,63,0	1/1:3,17:21:51.17:1440,51,0	1/1:1,8:9:27.09:775,27,0
chr10	10091847	.	TGGGGG	T	12966.81	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=10.567;DP=511;FS=36.900;HRun=13;HaplotypeScore=160.5970;InbreedingCoeff=0.9869;MQ=65.45;MQ0=0;MQRankSum=-11.983;QD=32.58;ReadPosRankSum=0.902;VQSLOD=0.4687;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,18:27:48.07:819,48,0	1/1:2,5:7:15.04:245,15,0	0/0:24,0:18:23.98:0,24,441	0/0:15,0:14:32.74:0,33,651	1/1:3,14:17:33.03:553,33,0	0/0:23,0:23:54.19:0,54,1152	0/0:29,0:29:69.22:0,69,1457	1/1:5,18:23:51.03:787,51,0	0/0:22,0:22:66.23:0,66,1455	1/1:4,8:12:24.03:411,24,0	1/1:2,10:12:30.10:497,30,0	1/1:2,25:27:69.20:1181,69,0	1/1:4,11:15:33.09:555,33,0	1/1:5,11:16:30.04:510,30,0	1/1:3,15:18:39.11:668,39,0	1/1:3,12:15:30.54:514,31,0	1/1:5,12:18:36.07:595,36,0	1/1:4,9:13:24.03:399,24,0	1/1:7,12:19:26.99:439,27,0	1/1:5,7:12:24.03:405,24,0	1/1:11,23:34:42.07:695,42,0	1/1:7,18:25:48.10:791,48,0	1/1:1,12:13:27.09:450,27,0	1/1:4,12:16:18.02:308,18,0	1/1:4,16:20:48.14:820,48,0	1/1:6,14:20:45.05:708,45,0	1/1:5,7:12:21.02:359,21,0	1/1:1,6:7:15.04:257,15,0
chr10	10091856	.	GGGGGT	G	8001.46	PASS	AB=0.980;AC=31;AF=0.554;AN=56;BaseQRankSum=14.189;DP=491;FS=37.758;HRun=0;HaplotypeScore=175.2372;InbreedingCoeff=-0.0957;MQ=62.13;MQ0=0;MQRankSum=-12.726;QD=20.95;ReadPosRankSum=8.027;VQSLOD=2.4957;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:25,1:26:12.76:522,0,13	0/1:8,0:8:31.93:139,0,32	0/0:19,0:13:28.90:0,29,494	0/0:18,0:16:42.01:0,42,771	1/1:18,0:18:13:356,13,0	0/0:19,0:19:57.17:0,57,1388	0/0:29,0:29:84.08:0,84,1967	0/1:22,0:22:46.67:370,0,47	0/0:24,0:24:72.22:0,72,1876	0/1:11,0:11:25.85:237,0,26	1/1:10,1:11:30.03:354,30,0	1/1:26,0:26:56.21:797,56,0	0/1:15,1:16:39.76:344,0,40	0/1:15,1:16:43.69:354,0,44	1/1:17,0:17:7.16:421,7,0	0/1:15,0:15:26.76:314,0,27	0/1:16,0:16:16.95:338,0,17	0/1:13,0:13:50.78:203,0,51	0/1:18,0:18:55.81:257,0,56	0/1:10,2:12:34.73:259,0,35	0/1:29,0:29:8.81:393,0,9	1/1:19,1:20:32.07:549,32,0	1/1:13,0:13:27.08:326,27,0	0/1:17,0:17:18.77:186,0,19	1/1:18,1:19:14.19:512,14,0	1/1:16,1:17:7.89:418,8,0	0/1:10,0:10:40.65:224,0,41	0/1:12,0:12:87.78:127,0,88
chr10	10095417	.	CCA	C	4838.80	PASS	AB=0.556;AC=23;AF=0.426;AN=54;BaseQRankSum=-5.485;DP=706;FS=3.550;HRun=0;HaplotypeScore=170.3925;InbreedingCoeff=0.8396;MQ=49.67;MQ0=17;MQRankSum=8.423;QD=15.17;ReadPosRankSum=7.041;VQSLOD=4.6549;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,34:41:47.88:560,48,0	0/0:4,0:14:14.90:0,15,120	0/0:55,0:10:10.39:0,10,123	0/0:53,0:12:14.30:0,14,129	1/1:4,13:17:27.08:315,27,0	0/0:9,0:29:16.72:0,17,85	0/0:16,0:30:8.85:0,9,81	1/1:17,7:25:23.90:259,24,0	0/0:11,0:26:25.31:0,25,138	0/0:20,0:24:50.60:0,51,528	0/0:7,0:12:2.74:0,3,12	0/0:24,2:26:8.37:0,8,807	1/1:9,16:26:50.94:553,51,0	1/1:10,19:31:57:639,57,0	0/0:12,0:27:22.47:0,22,123	0/0:11,0:23:34.41:0,34,219	0/0:9,0:12:6:0,6,52	0/0:7,0:10:8.71:0,9,58	1/1:14,5:17:15.04:175,15,0	0/1:3,8:15:16.02:241,0,16	1/1:23,23:47:45:525,45,0	1/1:14,18:32:32.94:385,33,0	1/1:9,7:15:18.05:210,18,0	1/1:6,25:30:53.83:629,54,0	1/1:8,9:17:30.09:350,30,0	0/0:9,0:26:48.78:0,49,350	0/0:11,0:17:14.17:0,14,87	./.
chr10	10095483	.	A	ACACAGCATCAGACGTT	60048.49	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-5.245;DP=634;FS=10.295;HRun=0;HaplotypeScore=287.4100;InbreedingCoeff=0.9586;MQ=66.39;MQ0=0;MQRankSum=-6.595;QD=99.58;ReadPosRankSum=2.693;VQSLOD=3.3795;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:33,9:43:78.13:3862,78,0	1/1:10,2:12:17.95:746,18,0	0/0:16,0:16:29.67:0,30,728	0/0:15,0:15:21.57:0,22,494	1/1:20,4:24:32.96:1263,33,0	1/1:12,2:14:27.05:1125,27,0	1/1:26,4:30:68.96:2964,69,0	1/1:40,0:40:90.22:4138,90,0	1/1:15,6:23:45.10:2728,45,0	1/1:17,5:24:44.02:2493,44,0	1/1:6,4:10:17.79:1046,18,0	1/1:22,7:30:72.07:3960,72,0	1/1:23,7:30:78.18:3943,78,0	1/1:17,7:26:51.01:2617,51,0	1/1:19,15:34:69.06:4149,69,0	1/1:8,11:21:45.07:2954,45,0	1/1:11,3:15:33.03:1813,33,0	1/1:7,3:11:27.05:1538,27,0	1/1:21,1:22:42.12:2114,42,0	1/1:14,6:23:50.89:2235,51,0	1/1:35,3:37:44.93:1138,45,0	1/1:16,5:21:41.97:1474,42,0	1/1:16,7:27:53.31:1880,53,0	1/1:26,3:29:41.87:1683,42,0	1/1:8,7:15:35.89:1627,36,0	1/1:18,7:25:69.23:4270,69,0	1/1:7,5:13:27:1644,27,0	1/1:1,2:3:9.03:645,9,0
chr10	10095699	.	A	ACCTGTC	42638.39	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=5.006;DP=555;FS=2.982;HRun=0;HaplotypeScore=172.4807;InbreedingCoeff=0.9884;MQ=75.60;MQ0=0;MQRankSum=-10.328;QD=83.28;ReadPosRankSum=2.944;VQSLOD=6.2369;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:12,21:33:69.24:2421,69,0	1/1:0,11:11:26.82:958,27,0	0/0:23,0:23:60.21:0,60,1395	0/0:20,0:20:57.18:0,57,1319	1/1:1,17:19:42.14:1464,42,0	1/1:0,13:13:39.13:1386,39,0	1/1:9,20:31:87.30:3004,87,0	1/1:17,8:25:72.25:2252,72,0	1/1:1,12:16:39.13:1363,39,0	1/1:7,10:19:48.15:1555,48,0	1/1:7,10:17:30.10:1062,30,0	1/1:5,12:17:48.12:1599,48,0	1/1:7,11:18:54.17:1801,54,0	1/1:8,10:18:42.14:1459,42,0	1/1:4,19:23:66.23:2295,66,0	1/1:1,15:18:45.15:1599,45,0	1/1:10,19:31:69.19:2364,69,0	1/1:5,6:13:21.07:750,21,0	1/1:12,8:20:48.16:1562,48,0	1/1:8,12:19:48.16:1704,48,0	1/1:9,13:22:48.16:1678,48,0	1/1:9,14:23:57.14:1835,57,0	1/1:6,6:12:27.09:947,27,0	1/1:7,20:27:45.14:1571,45,0	1/1:2,21:25:69.24:2447,69,0	1/1:8,7:19:51.15:1543,51,0	1/1:7,10:17:45.15:1566,45,0	1/1:3,2:5:15.04:453,15,0
chr10	10095711	.	AC	A	7403.27	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=1.777;DP=532;FS=2.512;HRun=1;HaplotypeScore=217.5625;InbreedingCoeff=0.9971;MQ=80.60;MQ0=0;MQRankSum=-7.914;QD=33.35;ReadPosRankSum=-1.411;VQSLOD=4.0365;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,28:28:56.93:795,57,0	0/0:12,0:12:26.77:0,27,418	0/0:23,0:23:69.23:0,69,1090	0/0:23,0:23:66.19:0,66,983	0/0:19,0:19:32.16:0,32,567	0/0:14,0:14:36.12:0,36,574	0/0:31,0:31:75.26:0,75,1195	1/1:0,21:21:60.67:838,61,0	0/0:18,0:18:48.13:0,48,715	0/0:16,0:16:39.13:0,39,622	0/0:13,0:13:24.08:0,24,382	1/1:0,16:16:45.15:628,45,0	1/1:0,15:15:42.14:586,42,0	1/1:0,18:18:51.17:711,51,0	0/0:25,0:25:66.22:0,66,1049	0/0:19,0:19:51.17:0,51,813	0/0:29,0:29:75.21:0,75,1167	0/0:12,0:12:30.10:0,30,470	1/1:0,17:17:48.16:671,48,0	1/1:0,19:19:48.16:669,48,0	1/1:0,22:22:44.96:665,45,0	1/1:0,22:22:54.18:753,54,0	1/1:0,13:13:33.11:460,33,0	1/1:0,31:31:44.79:627,45,0	0/0:23,0:23:66.23:0,66,1052	0/0:13,0:13:39.13:0,39,622	0/0:15,0:15:45.15:0,45,717	0/0:5,0:5:15.05:0,15,239
chr10	10096923	.	G	GACACATACAC	5645.21	PASS	AB=0.689;AC=37;AF=0.685;AN=54;BaseQRankSum=1.099;DP=709;FS=5.741;HRun=0;HaplotypeScore=213.9144;InbreedingCoeff=-0.1273;MQ=63.47;MQ0=16;MQRankSum=-7.033;QD=9.11;ReadPosRankSum=-0.307;VQSLOD=3.2082;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:9,25:45:2.75:156,3,0	0/1:5,0:13:24.98:25,0,85	0/0:47,0:20:34.32:0,34,383	0/0:40,0:25:37.31:0,37,483	1/1:25,0:22:20.72:183,21,0	0/1:14,0:23:50.44:123,0,50	0/1:27,0:31:99:237,0,248	1/1:27,0:27:72.33:864,72,0	0/1:7,0:17:71.15:100,0,71	0/1:16,0:30:99:432,0,167	0/1:17,0:29:16.66:17,0,145	1/1:2,15:23:12.04:618,12,0	1/1:19,0:19:35.78:554,36,0	1/1:19,0:18:14.66:111,15,0	0/1:16,0:28:11.76:12,0,208	0/1:9,0:19:61.68:62,0,121	0/1:15,0:21:10.48:326,0,10	0/1:9,0:20:69.13:69,0,131	1/1:14,0:12:12.36:222,12,0	1/1:3,0:25:3.01:136,3,0	1/1:42,0:40:43.78:383,44,0	0/1:3,19:29:0:0,0,0	1/1:5,13:20:5.93:192,6,0	1/1:4,18:29:3.01:157,3,0	1/1:1,0:18:2.04:6,2,0	0/1:22,0:33:99:559,0,228	0/1:6,0:16:51.98:101,0,52	./.
chr10	10098306	.	C	CTTGCTG	15989.55	PASS	AB=0.897;AC=47;AF=0.839;AN=56;BaseQRankSum=-7.025;DP=597;FS=7.613;HRun=0;HaplotypeScore=111.0821;InbreedingCoeff=0.7772;MQ=69.71;MQ0=2;MQRankSum=-7.028;QD=30.69;ReadPosRankSum=2.815;VQSLOD=4.3005;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,25:33:9.02:229,9,0	1/1:3,12:16:26.81:540,27,0	0/0:20,0:17:24.02:0,24,508	0/0:33,0:30:68.67:0,69,971	0/0:9,0:9:2.89:0,3,125	1/1:21,0:21:56.93:589,57,0	0/1:23,3:26:12.08:481,0,12	1/1:17,0:17:45.02:511,45,0	1/1:4,21:28:39.08:1148,39,0	1/1:4,10:15:29.97:330,30,0	1/1:2,10:12:17.65:188,18,0	1/1:6,24:31:39.08:1234,39,0	1/1:3,20:25:39.13:1260,39,0	1/1:5,25:31:51.12:1559,51,0	1/1:3,20:24:42.14:1429,42,0	1/1:4,23:28:36.12:1236,36,0	1/1:3,17:22:20.33:726,20,0	1/1:1,13:15:18.06:624,18,0	1/1:19,0:18:50.73:458,51,0	1/1:5,12:17:23.65:232,24,0	1/1:37,0:37:74.66:752,75,0	1/1:17,0:17:43.94:342,44,0	1/1:9,0:9:17.98:150,18,0	1/1:6,17:26:23.91:542,24,0	0/0:13,0:13:35.96:0,36,299	1/1:31,0:31:77.86:685,78,0	1/1:2,14:18:17.98:536,18,0	1/1:0,3:3:6.02:208,6,0
chr10	10098310	.	C	CTGT	8550.63	PASS	AB=0.948;AC=41;AF=0.732;AN=56;BaseQRankSum=-0.279;DP=587;FS=7.920;HRun=0;HaplotypeScore=114.5211;InbreedingCoeff=0.3077;MQ=66.94;MQ0=3;MQRankSum=-6.919;QD=17.00;ReadPosRankSum=6.377;VQSLOD=3.8759;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:30:5.99:93,0,6	1/1:15,0:15:23.08:227,23,0	0/0:25,0:18:48.98:0,49,536	0/0:34,0:30:73.99:0,74,946	0/0:10,0:10:2.69:0,3,125	1/1:20,0:20:13.04:459,13,0	0/1:12,16:28:88.66:214,0,89	1/1:20,0:20:21:442,21,0	1/1:26,1:27:38.95:539,39,0	0/1:14,0:14:54.06:208,0,54	1/1:10,0:10:18.12:130,18,0	1/1:30,1:31:0.89:481,1,0	1/1:22,1:23:39.13:592,39,0	1/1:27,1:28:53.97:759,54,0	1/1:21,0:21:42.14:601,42,0	0/1:25,0:25:14.41:483,0,14	0/1:22,0:22:1.70:289,0,2	1/1:15,0:15:2.09:292,2,0	1/1:18,0:17:15.22:356,15,0	1/1:14,0:14:23.65:173,24,0	1/1:37,0:36:36.44:584,36,0	1/1:18,0:18:43.54:340,44,0	1/1:9,0:9:17.98:150,18,0	0/1:26,0:26:23.40:219,0,23	0/0:15,0:15:38.95:0,39,325	1/1:31,0:31:10.45:611,10,0	0/1:18,0:18:1.96:220,0,2	1/1:3,0:3:6.02:90,6,0
chr10	10098968	.	C	CAAAAAA	1165.04	PASS	AB=0.948;AC=18;AF=0.321;AN=56;BaseQRankSum=1.725;DP=239;FS=8.924;HRun=0;HaplotypeScore=111.6152;InbreedingCoeff=0.6178;MQ=91.70;MQ0=0;MQRankSum=-4.839;QD=12.01;ReadPosRankSum=-3.131;VQSLOD=1.1255;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:17,4:22:8.95:489,0,9	0/0:4,0:4:11.84:0,12,99	0/0:11,0:11:27.08:0,27,490	0/0:22,0:21:39.70:0,40,693	0/1:16,0:16:20.97:21,0,143	0/0:9,0:9:24.05:0,24,283	0/0:9,0:9:24.07:0,24,305	1/1:9,0:9:14.37:101,14,0	0/0:8,0:8:23.94:0,24,291	0/0:5,0:5:14.94:0,15,182	0/0:3,0:3:5.68:0,6,36	0/0:10,0:10:1.94:0,2,8	0/1:7,0:7:1.88:12,0,2	1/1:4,1:6:6.53:119,7,0	0/0:7,0:7:14.90:0,15,151	0/0:5,0:5:15:0,15,190	0/0:9,0:9:17.60:0,18,214	0/0:6,0:6:9.01:0,9,108	1/1:6,0:5:5.01:40,5,0	1/1:7,0:7:17.78:117,18,0	0/1:3,0:3:0:0,0,0	1/1:3,1:6:13.93:308,14,0	1/1:6,0:5:10.85:61,11,0	1/1:6,0:7:1.32:75,1,0	0/0:13,0:13:29.47:0,29,190	0/0:8,0:8:23.96:0,24,301	0/0:5,0:5:14.90:0,15,134	0/0:8,0:7:15.04:0,15,195
chr10	10098969	.	T	TAAA	6262.74	PASS	AB=1.000;AC=50;AF=0.893;AN=56;BaseQRankSum=1.742;DP=361;FS=3.653;HRun=10;HaplotypeScore=207.7833;InbreedingCoeff=0.4085;MQ=76.01;MQ0=0;MQRankSum=-5.041;QD=19.09;ReadPosRankSum=-1.020;VQSLOD=0.8648;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:26:24.08:349,24,0	1/1:10,0:10:17.27:226,17,0	0/0:12,0:12:17.22:0,17,188	0/0:20,0:20:3.33:0,3,187	1/1:4,14:18:45.10:804,45,0	1/1:23,0:23:38.91:507,39,0	1/1:14,0:14:15.04:202,15,0	0/1:16,0:15:2.02:160,0,2	1/1:16,0:15:20.94:277,21,0	1/1:11,0:11:12.41:129,12,0	1/1:5,0:5:9.02:113,9,0	1/1:18,0:18:30.31:363,30,0	1/1:15,0:15:21.07:305,21,0	1/1:15,0:15:33.07:464,33,0	1/1:10,0:10:9.03:131,9,0	0/1:10,0:10:0.72:159,0,1	1/1:12,0:12:6.49:91,6,0	1/1:8,0:8:8.97:102,9,0	1/1:9,0:8:3.01:56,3,0	1/1:8,0:8:6.02:88,6,0	1/1:5,0:5:2.99:24,3,0	1/1:11,0:10:24.08:357,24,0	1/1:13,0:12:23.07:301,23,0	1/1:7,0:7:5.75:55,6,0	1/1:1,11:13:33.09:582,33,0	1/1:14,0:14:15.52:220,16,0	1/1:9,0:9:4.99:66,5,0	1/1:11,0:10:9.50:133,10,0
chr10	10099176	.	GCCTC	G	3443.80	PASS	AB=1.000;AC=31;AF=0.738;AN=42;BaseQRankSum=-4.278;DP=217;FS=6.455;HRun=0;HaplotypeScore=29.6576;InbreedingCoeff=0.5687;MQ=50.63;MQ0=28;MQRankSum=-3.191;QD=22.36;ReadPosRankSum=3.613;VQSLOD=2.1575;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,8:6:4.57:59,5,0	./.	0/0:17,0:10:26.97:0,27,360	0/0:13,0:7:15.05:0,15,242	0/0:5,0:5:12.04:0,12,196	./.	1/1:15,0:13:6.02:106,6,0	1/1:1,3:4:9.03:164,9,0	1/1:8,0:8:18.06:328,18,0	1/1:2,0:2:3.01:36,3,0	./.	1/1:11,0:7:18.06:331,18,0	1/1:9,0:7:5.88:109,6,0	1/1:11,0:8:12.04:216,12,0	1/1:12,0:10:15.05:270,15,0	1/1:2,0:2:3.01:55,3,0	1/1:20,0:19:30.10:538,30,0	0/1:14,0:12:41.79:357,0,42	./.	./.	./.	0/0:0,1:1:0:0,0,0	./.	1/1:19,0:15:29.92:545,30,0	0/0:4,0:4:9.03:0,9,147	1/1:0,2:2:4.26:58,4,0	1/1:8,0:6:6.02:109,6,0	1/1:6,0:5:9.03:164,9,0
chr10	10099180	.	C	CTG	3685.03	PASS	AB=0.853;AC=31;AF=0.646;AN=48;BaseQRankSum=-4.317;DP=232;FS=6.125;HRun=0;HaplotypeScore=23.8535;InbreedingCoeff=0.5029;MQ=47.97;MQ0=50;MQRankSum=-2.858;QD=23.03;ReadPosRankSum=1.792;VQSLOD=2.7941;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:11,0:6:7.23:49,0,7	./.	0/0:17,0:10:26.97:0,27,360	0/0:13,0:7:15.05:0,15,242	0/0:6,0:6:12.04:0,12,196	0/1:4,0:1:0:0,0,0	1/1:2,7:6:6.02:109,6,0	1/1:4,0:3:9.03:164,9,0	1/1:1,8:8:18.06:360,18,0	1/1:4,1:2:3.01:47,3,0	./.	1/1:3,9:7:18.06:342,18,0	1/1:2,5:6:6.49:120,6,0	1/1:3,7:7:12.04:222,12,0	1/1:1,9:9:15.05:289,15,0	1/1:1,2:2:3.01:60,3,0	1/1:0,20:19:30.10:577,30,0	0/1:3,11:12:28.50:394,0,29	0/0:9,0:4:0.46:0,0,4	./.	./.	0/0:1,0:1:0:0,0,0	0/0:1,0:1:0:0,0,0	1/1:6,17:15:30.10:586,30,0	0/0:5,0:4:9.03:0,9,147	1/1:3,0:2:5.93:71,6,0	1/1:0,7:6:6.02:120,6,0	1/1:2,4:4:9.03:175,9,0
chr10	10101642	.	GAGTTTTTTTCA	G	32988.14	PASS	AB=0.566;AC=41;AF=0.732;AN=56;BaseQRankSum=16.383;DP=604;FS=0.000;HRun=0;HaplotypeScore=273.7413;InbreedingCoeff=0.9065;MQ=70.99;MQ0=0;MQRankSum=-17.237;QD=76.01;ReadPosRankSum=4.926;VQSLOD=4.2366;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,14:23:39.13:1410,39,0	1/1:2,9:11:27.09:976,27,0	0/0:25,0:25:75.24:0,75,3743	0/0:17,0:17:45.63:0,46,2086	0/0:25,0:25:69.22:0,69,3792	0/0:27,0:27:72.23:0,72,4045	0/0:31,0:31:93.32:0,93,5081	1/1:8,14:22:48.16:1594,48,0	0/0:25,0:25:75.26:0,75,4176	1/1:3,14:17:42.14:1520,42,0	1/1:3,9:12:24.08:766,24,0	1/1:4,23:27:69.24:2484,69,0	1/1:5,26:31:81.28:2883,81,0	1/1:5,23:28:81.28:2726,81,0	1/1:8,24:31:81.28:2766,81,0	0/1:7,23:30:99:2576,0,432	1/1:6,12:18:36.12:1237,36,0	1/1:3,13:16:45.11:1511,45,0	1/1:9,9:19:33.09:1090,33,0	1/1:7,9:16:33.11:960,33,0	1/1:10,14:24:30.24:844,30,0	1/1:4,17:21:42.14:1260,42,0	1/1:2,19:21:39.13:1305,39,0	1/1:5,9:14:23.49:685,23,0	0/0:20,0:20:60.21:0,60,3278	1/1:6,14:20:45.15:1584,45,0	1/1:4,21:25:63.22:2161,63,0	1/1:1,6:7:18.06:651,18,0
chr10	10101643	.	A	AT	4202.80	PASS	AB=1.000;AC=41;AF=0.732;AN=56;BaseQRankSum=17.117;DP=530;FS=0.000;HRun=0;HaplotypeScore=249.2157;InbreedingCoeff=0.9040;MQ=74.06;MQ0=0;MQRankSum=-16.837;QD=11.64;ReadPosRankSum=4.580;VQSLOD=3.6800;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:15:33.43:128,33,0	1/1:9,0:9:23.64:95,24,0	0/0:25,0:25:71.93:0,72,829	0/0:16,0:16:44.43:0,44,434	0/0:27,0:27:69.23:0,69,952	0/0:25,0:25:72.22:0,72,988	0/0:31,0:31:93.30:0,93,1280	1/1:16,0:16:38.98:189,39,0	0/0:25,0:25:75.25:0,75,1045	1/1:14,0:14:32.80:114,33,0	1/1:9,1:10:22.09:142,22,0	1/1:23,0:24:58.94:224,59,0	1/1:27,0:27:71.34:316,71,0	1/1:26,1:27:72.56:404,73,0	1/1:27,0:27:69.34:364,69,0	0/1:29,0:29:33.61:270,0,34	1/1:14,0:14:31.47:153,31,0	1/1:14,1:15:37.78:186,38,0	1/1:11,0:11:25.77:98,26,0	1/1:12,0:12:30.19:234,30,0	1/1:18,0:18:28.06:242,28,0	1/1:17,0:17:35.40:204,35,0	1/1:19,1:20:35.15:212,35,0	1/1:11,0:11:22.42:167,22,0	0/0:20,0:20:60.20:0,60,833	1/1:14,1:15:36.59:165,37,0	1/1:22,0:21:53.39:241,53,0	1/1:7,0:7:14.72:53,15,0
chr10	10101657	.	CA	C	13093.24	PASS	AB=0.525;AC=41;AF=0.732;AN=56;BaseQRankSum=16.900;DP=600;FS=1.539;HRun=2;HaplotypeScore=232.5358;InbreedingCoeff=0.9041;MQ=68.94;MQ0=0;MQRankSum=-16.088;QD=29.89;ReadPosRankSum=3.691;VQSLOD=4.3125;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,27:27:48.16:619,48,0	1/1:0,9:9:27.09:347,27,0	0/0:27,0:27:81.26:0,81,1155	0/0:18,0:18:49.05:0,49,710	0/0:25,0:25:69.23:0,69,1033	0/0:26,0:26:78.26:0,78,1168	0/0:28,0:28:84.27:0,84,1236	1/1:0,25:25:75.23:957,75,0	0/0:21,0:21:63.20:0,63,923	1/1:0,18:18:51.17:660,51,0	1/1:0,12:12:24.08:309,24,0	1/1:0,28:28:72.23:922,72,0	1/1:0,30:30:78.25:1003,78,0	1/1:0,29:29:79.81:1008,80,0	1/1:0,30:30:81.26:1042,81,0	0/1:3,28:31:50.63:881,0,51	1/1:0,24:24:48.02:619,48,0	1/1:0,14:14:39.13:503,39,0	1/1:0,17:17:51.13:632,51,0	1/1:0,15:15:30.10:387,30,0	1/1:0,21:21:27.08:349,27,0	1/1:0,18:18:33.11:424,33,0	1/1:0,25:25:36.12:461,36,0	1/1:0,14:14:15.05:192,15,0	0/0:17,0:17:48.16:0,48,719	1/1:0,19:19:57.19:737,57,0	1/1:0,26:26:63.20:809,63,0	1/1:0,6:6:18.06:233,18,0
chr10	10102513	.	GCACACA	G	3541.90	PASS	AB=0.804;AC=20;AF=0.385;AN=52;BaseQRankSum=4.478;DP=807;FS=0.000;HRun=0;HaplotypeScore=218.1125;InbreedingCoeff=0.5817;MQ=61.12;MQ0=19;MQRankSum=-7.514;QD=11.69;ReadPosRankSum=1.142;VQSLOD=2.7162;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:42:44.94:0,45,962	1/1:8,6:14:9.02:109,9,0	./.	./.	0/0:14,0:14:18.03:0,18,358	0/0:7,0:13:8.64:0,9,110	0/0:23,0:29:15.45:0,15,266	0/0:28,0:28:12.40:0,12,132	0/0:23,0:31:17.24:0,17,331	1/1:15,7:24:27.09:511,27,0	1/1:7,2:10:6.48:110,6,0	0/0:24,0:25:40.94:0,41,873	0/0:32,0:32:55.55:0,56,1207	0/0:40,0:41:58.93:0,59,1350	1/1:23,8:35:18.78:323,19,0	1/1:22,11:35:47.63:768,48,0	1/1:23,4:28:29.83:464,30,0	0/1:19,6:27:7.77:465,0,8	1/1:14,0:15:2.66:6,3,0	0/0:13,1:16:1.28:0,1,39	0/1:62,0:64:36.91:37,0,95	0/0:27,0:29:38.92:0,39,819	0/0:14,0:17:18.06:0,18,324	0/0:51,0:48:78.25:0,78,2106	0/0:30,0:30:41.75:0,42,901	0/1:15,4:19:60.31:289,0,60	1/1:13,5:19:15.93:256,16,0	0/1:4,2:7:15.14:204,0,15
chr10	10102570	.	CAT	C	693.67	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=1.457;DP=971;FS=35.473;HRun=0;HaplotypeScore=303.6090;InbreedingCoeff=0.6925;MQ=47.11;MQ0=23;MQRankSum=-1.275;QD=6.94;ReadPosRankSum=2.699;VQSLOD=1.4777;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:46:91.92:0,92,458	0/0:10,1:11:8.41:0,8,29	0/0:62,0:17:47.21:0,47,535	0/0:64,0:19:26.35:0,26,526	0/0:25,0:25:69.24:0,69,1307	1/1:17,0:17:17.10:179,17,0	1/1:44,0:41:25.34:353,25,0	0/0:31,0:24:63.51:0,64,487	0/1:38,0:37:27.36:289,0,27	0/0:38,1:36:60.37:0,60,383	0/0:16,0:15:26.69:0,27,119	0/0:48,0:47:58.06:0,58,362	0/0:40,0:38:22.64:0,23,260	0/0:45,0:43:41.54:0,42,304	0/0:41,0:41:53.20:0,53,248	0/0:47,0:47:66.32:0,66,307	0/0:26,1:27:20.44:0,20,153	0/0:34,0:34:46.62:0,47,359	0/0:18,0:14:5.24:0,5,109	0/0:18,0:17:18.14:0,18,139	0/0:72,0:64:72.76:0,73,475	0/0:31,0:29:49.47:0,49,241	0/0:15,0:15:22.98:0,23,149	0/0:56,0:52:78.53:0,79,486	0/0:29,0:29:75.20:0,75,1374	0/0:32,1:33:30.63:0,31,281	0/0:13,0:13:10.71:0,11,85	0/0:8,0:8:15.65:0,16,96
chr10	10102572	.	TACAC	T	19276.24	PASS	AB=0.755;AC=40;AF=0.714;AN=56;BaseQRankSum=-4.993;DP=974;FS=2.501;HRun=0;HaplotypeScore=267.5399;InbreedingCoeff=0.6907;MQ=47.43;MQ0=23;MQRankSum=0.421;QD=25.43;ReadPosRankSum=-0.176;VQSLOD=4.5858;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:16,32:46:56.43:1431,56,0	1/1:5,6:11:12.51:212,13,0	0/0:60,1:16:34.64:0,35,498	0/1:59,2:19:1.45:1,0,563	0/0:26,0:26:72.21:0,72,1734	0/0:4,0:18:36.53:0,37,175	0/0:6,0:40:81.47:0,81,372	1/1:6,23:23:47.88:509,48,0	0/0:13,0:37:67.90:0,68,394	1/1:19,21:36:87.74:1406,88,0	1/1:8,8:16:32.93:487,33,0	1/1:21,26:47:96.57:1595,97,0	1/1:23,19:40:70.92:1396,71,0	1/1:18,27:43:86.94:1345,87,0	1/1:13,30:43:70:1127,70,0	1/1:17,31:49:87.05:1355,87,0	0/1:14,13:27:15.97:839,0,16	1/1:13,20:34:71.80:1064,72,0	0/1:10,9:15:15.63:281,0,16	1/1:10,6:16:27.06:422,27,0	1/1:39,35:67:86.14:1296,86,0	1/1:11,20:29:47.90:805,48,0	1/1:8,7:15:21.04:314,21,0	1/1:20,35:52:99:1719,106,0	0/0:29,0:29:69.20:0,69,1740	1/1:20,14:34:65.81:1054,66,0	1/1:7,6:13:27.04:428,27,0	0/1:4,3:7:21.36:189,0,21
chr10	10102582	.	CACAG	C	9468.64	PASS	AB=0.963;AC=29;AF=0.518;AN=56;BaseQRankSum=7.747;DP=931;FS=4.627;HRun=0;HaplotypeScore=289.5070;InbreedingCoeff=0.0301;MQ=49.04;MQ0=10;MQRankSum=0.108;QD=13.10;ReadPosRankSum=10.948;VQSLOD=2.7201;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:47,0:45:8.57:609,0,9	0/1:9,2:11:2.98:97,0,3	0/0:44,0:13:34.85:0,35,503	0/1:47,0:15:1.94:2,0,679	0/0:26,0:26:75.24:0,75,2008	0/0:21,0:21:38.80:0,39,290	0/0:42,0:38:86.98:0,87,656	0/1:31,0:25:99:104,0,159	0/0:44,0:43:89.28:0,89,643	0/1:38,2:36:48.19:679,0,48	0/1:16,2:18:16.95:221,0,17	1/1:41,1:42:85.03:847,85,0	1/1:41,0:39:49.41:755,49,0	1/1:39,1:38:64.76:711,65,0	0/1:46,0:46:99:507,0,105	0/1:47,0:47:2.14:610,0,2	0/1:28,0:28:80.38:440,0,80	1/1:29,1:30:40.64:547,41,0	0/1:14,1:14:43.58:165,0,44	1/1:12,3:15:3.04:252,3,0	0/1:85,0:77:99:509,0,216	1/1:25,1:24:25.06:449,25,0	0/1:12,0:12:7:117,0,7	1/1:54,0:50:59.09:879,59,0	0/0:31,0:31:81.25:0,81,1976	0/1:27,2:29:12.58:568,0,13	0/1:12,0:12:18.94:261,0,19	0/1:6,1:7:3.10:137,0,3
chr10	10102632	.	AGCACATGCATACACAC	A	4650.84	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.681;DP=1071;FS=45.301;HRun=0;HaplotypeScore=521.7620;InbreedingCoeff=0.9940;MQ=54.63;MQ0=14;MQRankSum=-10.264;QD=58.14;ReadPosRankSum=-6.081;VQSLOD=3.0606;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:63,0:61:99:0,162,8856	0/0:12,0:12:36.11:0,36,1817	0/0:46,0:17:36.66:0,37,956	0/0:37,0:16:41.03:0,41,1149	0/0:27,0:27:81.25:0,81,4485	1/1:5,9:14:35.94:756,36,0	1/1:16,8:22:53.78:935,54,0	0/0:37,0:37:99:0,111,3882	1/1:18,24:40:99:2961,111,0	0/0:52,0:51:99:0,150,7898	0/0:17,0:17:48.14:0,48,2140	0/0:50,0:50:99:0,129,6803	0/0:40,0:40:99:0,102,4384	0/0:42,0:41:91.81:0,92,5541	0/0:53,0:53:99:0,138,7958	0/0:48,1:47:72.39:0,72,6958	0/0:35,0:35:63.60:0,64,3710	0/0:42,0:42:66.97:0,67,4867	0/0:18,0:16:42.10:0,42,1529	0/0:21,0:20:36.60:0,37,1856	0/0:150,0:143:99:0,333,16852	0/0:36,0:36:93.32:0,93,4736	0/0:27,0:26:65.98:0,66,3286	0/0:60,0:56:99:0,121,6092	0/0:28,0:28:78.18:0,78,3924	0/0:25,0:25:61.27:0,61,3776	0/0:12,0:12:30.07:0,30,1685	0/0:7,0:7:15.05:0,15,886
chr10	10102648	.	C	CACAA	2199.34	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.187;DP=1149;FS=24.112;HRun=0;HaplotypeScore=340.2562;InbreedingCoeff=0.9804;MQ=54.84;MQ0=20;MQRankSum=-8.513;QD=26.82;ReadPosRankSum=-6.669;VQSLOD=1.2034;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:66,0:65:99:0,168,2974	0/0:15,0:15:45.13:0,45,789	0/0:56,0:16:19.71:0,20,634	0/0:41,0:16:30.69:0,31,466	0/0:29,0:29:84.22:0,84,1473	1/1:11,0:11:12.02:234,12,0	1/1:22,4:26:61.71:787,62,0	0/0:37,0:36:96.31:0,96,1728	1/1:40,5:44:24.59:1318,25,0	0/0:60,0:58:99:0,165,2676	0/0:17,0:17:47.79:0,48,755	0/0:48,0:48:99:0,117,2099	0/0:48,0:47:99:0,108,1778	0/0:50,0:49:99:0,117,2040	0/0:54,0:54:99:0,135,2460	0/0:53,0:51:99:0,132,2366	0/0:35,0:35:81.10:0,81,1380	0/0:40,0:40:76.85:0,77,1659	0/0:15,0:14:33.04:0,33,520	0/0:22,0:21:44.86:0,45,812	0/0:174,0:168:99:0,399,6830	0/0:36,0:36:96.21:0,96,1722	0/0:31,0:30:71.92:0,72,1298	0/0:57,0:54:99:0,115,2123	0/0:30,0:30:87.27:0,87,1561	0/0:26,0:26:75.22:0,75,1304	0/0:16,0:16:42.11:0,42,704	0/0:9,0:9:15.05:0,15,284
chr10	10102670	.	T	TAC	35765.87	PASS	AB=0.652;AC=47;AF=0.839;AN=56;BaseQRankSum=-9.203;DP=1227;FS=3.400;HRun=0;HaplotypeScore=192.4682;InbreedingCoeff=0.8659;MQ=55.69;MQ0=21;MQRankSum=1.292;QD=33.27;ReadPosRankSum=2.046;VQSLOD=6.0195;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,61:68:99:2570,121,0	1/1:2,16:18:45.15:749,45,0	0/0:47,0:14:13.82:0,14,131	0/0:48,0:21:40.58:0,41,494	0/0:28,0:28:81.24:0,81,1016	0/1:7,8:15:13.99:300,0,14	1/1:8,28:36:78.10:1216,78,0	1/1:8,25:29:72.22:1134,72,0	1/1:14,42:57:99:1585,100,0	1/1:8,57:64:99:2391,156,0	1/1:0,16:17:36.12:602,36,0	1/1:4,40:44:96.33:1605,96,0	1/1:5,37:42:90.31:1492,90,0	1/1:4,54:57:99:2454,147,0	1/1:13,47:60:99:2056,123,0	1/1:8,41:49:99:1755,105,0	1/1:5,34:40:72.16:1204,72,0	1/1:7,33:41:44.84:1306,45,0	1/1:7,9:14:27.05:410,27,0	1/1:2,19:22:48.16:802,48,0	1/1:30,152:182:99:5734,347,0	1/1:18,17:35:43.02:1122,43,0	1/1:4,29:33:66.22:1104,66,0	1/1:9,53:64:73.32:1768,73,0	0/0:29,0:29:63.18:0,63,786	1/1:7,27:34:81.26:1305,81,0	1/1:3,15:18:39.13:652,39,0	1/1:2,13:15:27.09:451,27,0
chr10	10103687	.	A	ATG	1715.55	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-8.744;DP=665;FS=0.000;HRun=0;HaplotypeScore=81.0961;InbreedingCoeff=0.9893;MQ=59.80;MQ0=3;MQRankSum=0.404;QD=31.19;ReadPosRankSum=2.379;VQSLOD=5.2366;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,111,1317	0/0:13,0:13:33.09:0,33,394	0/0:16,0:12:18.42:0,18,199	0/0:20,0:16:29.92:0,30,335	0/0:20,0:21:56.96:0,57,649	0/0:18,0:18:48.08:0,48,549	0/0:27,0:27:75.21:0,75,898	0/0:34,0:34:62.61:0,63,745	0/0:24,0:24:69.22:0,69,849	0/0:27,0:27:71.56:0,72,821	0/0:15,0:15:39.12:0,39,480	0/0:19,0:19:48.13:0,48,577	0/0:18,0:18:42.13:0,42,517	0/0:23,0:24:69.01:0,69,789	0/0:28,0:28:75.22:0,75,910	0/0:15,0:15:42.13:0,42,517	0/0:31,0:32:81.05:0,81,946	0/0:23,0:23:54.14:0,54,646	0/0:24,0:23:50.81:0,51,580	0/0:23,0:24:50.98:0,51,604	1/1:5,49:54:99:1810,111,0	0/0:21,0:21:54.12:0,54,642	0/0:25,0:25:51.14:0,51,614	0/0:16,0:17:30.09:0,30,369	0/0:22,0:22:48.04:0,48,570	0/0:29,0:29:75.19:0,75,922	0/0:21,0:21:48.13:0,48,577	0/0:10,0:10:24.07:0,24,294
chr10	10106119	.	AT	A	9668.13	PASS	AB=0.821;AC=49;AF=0.875;AN=56;BaseQRankSum=-1.088;DP=577;FS=2.541;HRun=10;HaplotypeScore=69.7663;InbreedingCoeff=0.5442;MQ=77.81;MQ0=1;MQRankSum=-1.406;QD=18.07;ReadPosRankSum=4.197;VQSLOD=5.6045;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,38:47:72.45:784,72,0	1/1:2,12:14:38.03:318,38,0	0/1:19,2:21:26.04:26,0,180	0/1:12,0:11:20.42:20,0,111	0/0:29,0:29:66.06:0,66,674	1/1:3,16:20:25.34:349,25,0	1/1:5,17:22:44.99:391,45,0	1/1:5,23:29:70.94:590,71,0	1/1:4,19:23:47.97:416,48,0	1/1:6,16:22:47.90:405,48,0	1/1:2,10:12:10.25:215,10,0	1/1:1,18:19:50.98:443,51,0	1/1:1,10:11:26.98:234,27,0	1/1:3,27:30:71.98:625,72,0	1/1:2,14:17:40.99:345,41,0	1/1:1,14:15:38.99:339,39,0	1/1:0,23:23:62.86:547,63,0	1/1:5,23:28:62.95:547,63,0	1/1:4,19:23:56.97:494,57,0	1/1:6,11:18:31.90:256,32,0	0/1:6,15:21:1.12:294,0,1	1/1:1,19:20:32.66:286,33,0	1/1:2,5:7:14.99:130,15,0	1/1:5,26:31:68.90:590,69,0	0/0:13,0:13:36.09:0,36,389	1/1:1,18:20:57.99:466,58,0	1/1:2,14:16:38.82:338,39,0	1/1:4,9:13:17.38:220,17,0
chr10	10107269	.	GGAGAGAGAGAGA	G	1200.27	PASS	AB=1.000;AC=20;AF=0.667;AN=30;BaseQRankSum=3.650;DP=330;FS=2.955;HRun=0;HaplotypeScore=109.0517;InbreedingCoeff=0.4330;MQ=62.63;MQ0=9;MQRankSum=-3.709;QD=6.52;ReadPosRankSum=-0.402;VQSLOD=1.5140;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:27:78.12:78,0,91	./.	./.	0/0:23,0:10:0:0,0,0	0/0:16,0:16:18.05:0,18,521	1/1:4,11:17:12.04:328,12,0	1/1:14,10:25:22.65:512,23,0	0/1:9,0:9:0:0,0,0	1/1:9,0:9:8.99:98,9,0	./.	./.	1/1:12,0:12:4.26:42,4,0	1/1:13,0:12:6.02:123,6,0	1/1:15,0:15:5.71:91,6,0	./.	./.	./.	./.	0/1:5,0:5:0:0,0,0	./.	1/1:32,0:31:1.23:4,1,0	0/1:9,0:9:0:0,0,0	./.	1/1:11,0:10:3.01:31,3,0	0/0:12,0:12:15.04:0,15,626	./.	./.	./.
chr10	10107290	.	GAGAGAGAGAGAGAGA	G	1229.40	PASS	AB=0.971;AC=20;AF=0.556;AN=36;BaseQRankSum=4.911;DP=218;FS=0.000;HRun=0;HaplotypeScore=83.2871;InbreedingCoeff=0.2544;MQ=43.66;MQ0=24;MQRankSum=-2.640;QD=9.84;ReadPosRankSum=0.200;VQSLOD=1.4335;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:13,2:15:99:199,0,120	./.	0/0:17,0:4:5.96:0,6,44	0/0:21,0:4:3.01:0,3,34	0/0:16,0:16:36.12:0,36,1423	0/1:19,0:17:85.30:177,0,85	0/1:26,0:26:73.12:125,0,73	1/1:3,0:3:2.49:26,2,0	0/0:9,0:9:21.52:0,22,288	./.	./.	1/1:6,1:7:4.02:126,4,0	1/1:1,4:4:6.02:224,6,0	1/1:6,1:6:9.50:231,10,0	./.	0/0:2,0:2:2.99:0,3,24	./.	./.	0/1:6,0:6:35.38:35,0,53	./.	1/1:23,0:18:12.04:102,12,0	1/1:3,0:2:0.89:2,1,0	1/1:3,0:2:3.28:8,3,0	1/1:6,0:5:5.99:104,6,0	0/0:19,0:18:30.06:0,30,1571	./.	./.	./.
chr10	10107294	.	GAGAGAGAGAGAGAGA	G	1211.96	PASS	AB=1.000;AC=18;AF=0.529;AN=34;BaseQRankSum=4.584;DP=199;FS=0.923;HRun=0;HaplotypeScore=62.2883;InbreedingCoeff=0.3037;MQ=42.41;MQ0=24;MQRankSum=-4.958;QD=11.43;ReadPosRankSum=0.674;VQSLOD=1.2119;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:14,0:14:95.83:270,0,96	0/1:1,0:1:0:0,0,0	./.	0/0:17,0:2:0:0,0,0	0/0:16,0:16:36.11:0,36,1254	0/1:19,0:17:24.62:188,0,25	0/1:24,0:24:42.13:134,0,42	0/0:3,0:2:3.37:0,3,17	0/0:7,0:7:15.46:0,15,192	./.	./.	1/1:1,5:6:6.02:146,6,0	1/1:5,0:4:6.02:226,6,0	1/1:6,0:5:9.03:237,9,0	./.	./.	./.	1/1:3,0:2:2.97:20,3,0	0/0:6,0:6:17.35:0,17,98	./.	1/1:21,0:15:2.18:28,2,0	./.	1/1:2,0:1:1.55:4,2,0	1/1:5,0:3:3.01:82,3,0	0/0:18,0:17:26.98:0,27,1461	./.	./.	./.
chr10	10107314	.	AAGGG	A	637.19	PASS	AB=0.950;AC=27;AF=0.540;AN=50;BaseQRankSum=2.515;DP=251;FS=0.000;HRun=0;HaplotypeScore=49.8368;InbreedingCoeff=0.3926;MQ=34.63;MQ0=26;MQRankSum=-2.121;QD=3.86;ReadPosRankSum=-1.535;VQSLOD=1.1405;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:16:25.40:137,25,0	0/1:3,0:3:0:0,0,0	0/0:7,0:1:2.99:0,3,23	0/1:20,0:2:0.83:1,0,22	0/1:12,0:11:17.98:18,0,90	0/0:11,0:10:4.09:0,4,109	0/0:25,0:24:33.36:0,33,253	1/1:11,0:9:11.78:76,12,0	0/0:9,0:9:15.46:0,15,162	./.	0/0:1,0:1:0:0,0,0	1/1:10,0:10:13.32:108,13,0	1/1:8,0:7:2.46:10,2,0	0/0:5,0:4:0:0,0,0	0/1:4,0:4:3.21:18,0,3	0/0:3,0:3:3.01:0,3,47	1/1:8,0:6:5.27:29,5,0	./.	0/1:10,5:10:34.58:48,0,35	1/1:4,2:4:2.52:18,3,0	1/1:24,0:19:18.18:147,18,0	0/0:7,0:5:0.94:0,1,2	1/1:6,0:5:8.89:63,9,0	1/1:13,0:12:5.86:35,6,0	0/0:13,0:12:12.36:0,12,91	1/1:8,0:6:7.80:54,8,0	1/1:1,0:1:2.98:21,3,0	./.
chr10	10107330	.	GAGGGAGGA	G	1417.43	PASS	AB=1.000;AC=29;AF=0.558;AN=52;BaseQRankSum=1.745;DP=313;FS=5.617;HRun=0;HaplotypeScore=80.7377;InbreedingCoeff=0.3486;MQ=41.68;MQ0=24;MQRankSum=-2.647;QD=7.75;ReadPosRankSum=-0.314;VQSLOD=0.8611;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:17:40.33:323,40,0	1/1:4,0:4:6:54,6,0	0/0:7,0:1:2.99:0,3,23	0/1:18,0:2:0.82:1,0,22	0/1:12,0:11:3.77:4,0,146	0/0:15,0:13:19.91:0,20,453	0/0:29,0:27:53.47:0,53,555	1/1:20,0:18:11.50:76,11,0	0/0:12,0:12:30.01:0,30,582	1/1:5,0:3:5.99:103,6,0	./.	0/0:15,0:15:4.94:0,5,272	1/1:7,0:7:5.52:37,6,0	1/1:7,0:7:11.97:148,12,0	1/1:7,0:6:2.99:79,3,0	0/1:6,0:6:88.41:91,0,88	1/1:13,0:12:22.95:186,23,0	1/1:3,0:2:5.98:49,6,0	0/1:18,0:13:45.39:45,0,153	0/0:7,0:5:6.01:0,6,78	0/0:36,0:31:20.06:0,20,599	0/0:7,0:6:6.95:0,7,73	0/1:6,0:5:28.36:28,0,36	0/1:13,0:12:8.12:8,0,95	0/1:12,0:11:30.31:30,0,90	1/1:2,9:10:23.99:227,24,0	1/1:4,0:4:11.96:106,12,0	./.
chr10	10109460	.	GGTTT	G	7573.51	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=2.864;DP=769;FS=5.369;HRun=0;HaplotypeScore=153.2253;InbreedingCoeff=0.9841;MQ=55.80;MQ0=7;MQRankSum=-0.744;QD=20.81;ReadPosRankSum=3.045;VQSLOD=4.4746;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:26:45.15:0,45,786	1/1:7,8:15:27.09:425,27,0	0/0:35,0:19:12:0,12,225	0/0:48,0:29:24.08:0,24,483	1/1:10,16:26:42.10:634,42,0	1/1:8,0:22:36.04:335,36,0	1/1:17,0:35:20.97:178,21,0	0/0:31,0:31:30.10:0,30,633	1/1:8,0:25:39.04:362,39,0	1/1:13,12:25:39.13:613,39,0	1/1:6,14:20:33.03:455,33,0	0/0:14,0:25:24.08:0,24,433	0/0:11,0:20:18.06:0,18,305	0/0:6,0:28:42.14:0,42,745	1/1:9,23:32:57.19:898,57,0	0/0:30,0:31:63.19:0,63,1495	1/1:17,18:35:39.13:614,39,0	1/1:17,15:32:45.12:685,45,0	0/0:16,0:16:9.03:0,9,214	0/0:25,0:25:63.22:0,63,1492	0/0:24,0:24:57.17:0,57,1289	0/0:14,0:26:42.13:0,42,706	0/0:9,0:25:40.08:0,40,712	0/0:14,0:43:69.24:0,69,1205	1/1:5,21:27:60.20:926,60,0	1/1:12,10:22:30.07:428,30,0	1/1:10,17:27:48.16:756,48,0	1/1:13,7:21:18.05:264,18,0
chr10	10110810	.	C	CGTGTGT	3451.75	PASS	AB=1.000;AC=33;AF=0.589;AN=56;BaseQRankSum=10.197;DP=689;FS=56.196;HRun=0;HaplotypeScore=171.4398;InbreedingCoeff=-0.0238;MQ=58.74;MQ0=10;MQRankSum=-2.801;QD=6.00;ReadPosRankSum=-1.484;VQSLOD=0.6492;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:12,22:43:14.26:185,14,0	0/1:15,0:15:48.30:48,0,205	0/0:26,0:15:28.23:0,28,462	0/0:37,0:25:55.14:0,55,791	0/1:14,0:14:42.53:43,0,163	0/0:8,0:8:8.34:0,8,111	0/0:32,0:32:22.87:0,23,542	1/1:27,0:27:38.75:293,39,0	0/1:33,0:33:14.27:14,0,492	0/1:28,0:28:35.74:36,0,672	0/0:11,0:10:3.01:0,3,38	1/1:10,17:29:11.10:336,11,0	1/1:8,18:29:13.74:478,14,0	1/1:11,0:23:17.39:178,17,0	0/1:23,0:22:68.38:68,0,317	0/1:19,0:18:97.15:154,0,97	0/1:38,0:37:99:128,0,420	0/1:27,0:26:8.07:8,0,434	0/1:17,0:15:26.98:127,0,27	1/1:15,0:15:14.29:128,14,0	1/1:40,0:39:16.84:155,17,0	1/1:18,0:18:16.90:161,17,0	1/1:6,12:21:2.43:93,2,0	1/1:22,0:38:14.29:181,14,0	0/1:24,0:24:99:261,0,359	0/1:30,0:29:99:123,0,734	0/1:13,0:13:99:182,0,123	0/1:11,0:9:70.97:71,0,110
chr10	10110814	.	C	CCGTGT	1395.24	PASS	AB=0.842;AC=23;AF=0.411;AN=56;BaseQRankSum=9.552;DP=702;FS=27.510;HRun=0;HaplotypeScore=167.2900;InbreedingCoeff=-0.5751;MQ=57.12;MQ0=11;MQRankSum=-3.865;QD=2.57;ReadPosRankSum=2.914;VQSLOD=1.2296;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:37,0:37:44.31:134,0,44	0/1:9,0:15:48.63:49,0,173	0/0:22,0:11:22.02:0,22,372	0/0:37,0:21:53.58:0,54,632	0/1:9,0:17:41.92:42,0,171	0/1:8,0:13:20.95:21,0,107	0/1:18,0:35:99:132,0,513	0/0:26,0:26:13.30:0,13,470	0/1:16,0:34:99:139,0,436	0/0:29,0:29:14.20:0,14,623	0/0:11,0:10:3.01:0,3,39	0/1:27,0:27:86.22:112,0,86	0/1:31,0:31:99:207,0,143	0/1:22,0:22:19.51:20,0,170	0/1:23,0:22:49.25:49,0,284	0/1:8,1:19:89.34:89,0,96	0/1:24,0:45:96.35:96,0,412	0/1:16,0:28:36.17:36,0,384	0/1:16,0:14:1.29:1,0,197	0/1:16,0:16:9.03:9,0,122	0/0:35,0:34:49.56:0,50,431	0/1:19,0:19:53.56:54,0,170	1/1:18,0:18:2.44:34,2,0	0/1:37,0:37:15.04:15,0,166	0/1:12,0:25:99:170,0,304	0/1:24,0:33:29.89:30,0,775	0/1:13,0:14:90.32:90,0,152	0/1:12,0:11:21.53:22,0,133
chr10	10114417	.	A	AG	24904.59	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=7.259;DP=645;FS=8.924;HRun=0;HaplotypeScore=91.1481;InbreedingCoeff=0.9835;MQ=89.03;MQ0=0;MQRankSum=-8.682;QD=44.71;ReadPosRankSum=5.743;VQSLOD=4.0523;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,50:50:99:2206,138,0	1/1:0,11:11:33.11:527,33,0	0/0:23,0:23:66.18:0,66,869	0/0:23,0:23:63.17:0,63,843	0/0:16,0:16:48.16:0,48,671	1/1:0,18:18:51.17:815,51,0	1/1:1,25:26:69.24:1103,69,0	1/1:1,21:22:63.20:979,63,0	1/1:0,28:28:81.28:1295,81,0	1/1:0,27:27:81.28:1285,81,0	1/1:0,10:10:27.09:425,27,0	1/1:0,19:19:51.17:815,51,0	1/1:1,30:31:87.30:1390,87,0	1/1:1,23:24:69.23:1090,69,0	1/1:2,15:17:45.15:719,45,0	1/1:0,24:24:66.23:1055,66,0	1/1:2,33:35:96.33:1534,96,0	1/1:0,23:23:63.21:1007,63,0	1/1:1,15:16:48.15:745,48,0	1/1:0,22:22:66.23:1055,66,0	1/1:0,45:45:99:2014,126,0	1/1:0,14:15:42.14:652,42,0	1/1:1,11:13:33.11:514,33,0	1/1:0,33:33:93.32:1487,93,0	0/0:26,0:26:78.26:0,78,1088	1/1:1,21:22:66.22:1042,66,0	1/1:0,22:22:63.21:1004,63,0	1/1:0,4:4:9.03:144,9,0
chr10	10114799	.	CTTTG	C	22695.46	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=5.542;DP=759;FS=0.000;HRun=0;HaplotypeScore=144.0885;InbreedingCoeff=0.9973;MQ=69.51;MQ0=3;MQRankSum=-3.032;QD=34.54;ReadPosRankSum=5.800;VQSLOD=4.3781;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,46:57:99:1812,108,0	1/1:2,7:9:17.74:302,18,0	0/0:29,0:29:65.94:0,66,1326	0/0:20,0:18:36.12:0,36,789	0/0:22,0:22:57.20:0,57,1388	1/1:5,25:30:66.23:1108,66,0	1/1:9,16:25:39.13:653,39,0	1/1:10,16:26:48.14:750,48,0	1/1:5,31:35:75.26:1258,75,0	1/1:8,30:38:90.31:1510,90,0	1/1:3,13:17:36.12:603,36,0	1/1:5,23:28:60.21:1008,60,0	1/1:2,33:35:87.30:1459,87,0	1/1:1,20:21:45.15:754,45,0	1/1:1,22:23:45.15:756,45,0	1/1:10,25:35:66.23:1108,66,0	1/1:6,20:25:57.19:956,57,0	1/1:6,20:26:42.14:705,42,0	1/1:4,13:17:39.04:547,39,0	1/1:4,16:21:42.14:704,42,0	1/1:9,37:46:80.55:1359,81,0	1/1:1,24:24:60.20:1002,60,0	1/1:4,16:20:33.11:554,33,0	1/1:5,24:29:60.21:1008,60,0	0/0:31,0:31:72.25:0,72,1786	1/1:4,27:31:84.22:1320,84,0	1/1:2,22:24:54.18:906,54,0	1/1:0,12:12:33.11:553,33,0
chr10	10116253	.	G	GT	2821.40	PASS	AB=0.588;AC=43;AF=0.768;AN=56;BaseQRankSum=-4.462;DP=284;FS=22.533;HRun=2;HaplotypeScore=45.9200;InbreedingCoeff=0.6468;MQ=76.77;MQ0=2;MQRankSum=-0.842;QD=12.21;ReadPosRankSum=-1.899;VQSLOD=0.3061;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:15:19.74:176,20,0	1/1:3,0:3:5.49:34,5,0	0/0:17,0:11:2.48:0,2,106	0/0:10,0:8:13.38:0,13,105	0/0:4,0:4:8.99:0,9,76	1/1:8,1:9:14.16:98,14,0	0/1:6,14:20:2.10:48,0,2	1/1:11,0:11:20.88:169,21,0	0/0:1,7:8:0:0,0,0	1/1:6,0:6:12.01:110,12,0	1/1:2,0:2:5.99:49,6,0	1/1:14,0:14:16.02:119,16,0	1/1:5,0:5:11.94:91,12,0	1/1:15,0:15:12.87:82,13,0	1/1:12,0:12:29.20:195,29,0	1/1:17,0:17:30.08:259,30,0	1/1:10,0:10:21.56:135,22,0	1/1:13,0:13:19.12:199,19,0	1/1:14,0:14:19.54:215,20,0	1/1:7,0:7:10.94:70,11,0	1/1:18,0:18:37.79:266,38,0	1/1:8,0:8:14.93:122,15,0	1/1:8,0:8:11.88:90,12,0	0/0:5,7:12:1.55:0,2,4	0/0:2,0:2:3:0,3,27	1/1:10,0:10:20.95:180,21,0	1/1:11,0:11:29.22:198,29,0	1/1:3,0:3:8.77:58,9,0
chr10	10116748	.	T	TC	295.65	PASS	AB=1.000;AC=6;AF=0.107;AN=56;BaseQRankSum=-2.124;DP=400;FS=0.873;HRun=10;HaplotypeScore=84.2196;InbreedingCoeff=0.2285;MQ=83.74;MQ0=1;MQRankSum=1.017;QD=4.48;ReadPosRankSum=-1.665;VQSLOD=0.7032;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:1.69:0,2,6	0/1:4,0:4:14.19:25,0,14	0/0:24,0:24:3.47:0,3,220	0/1:22,0:18:3.56:4,0,80	0/0:12,0:12:25.97:0,26,190	0/0:15,0:15:20.36:0,20,59	0/0:21,0:21:32.59:0,33,95	0/0:23,0:23:6.67:0,7,44	0/0:11,0:11:18.33:0,18,53	0/0:13,0:13:25.19:0,25,137	0/0:6,0:6:1.84:0,2,34	0/1:15,0:15:0.01:0,0,4	0/0:13,0:13:1.36:0,1,5	0/0:14,0:14:0.59:0,1,3	0/0:16,0:16:13.44:0,13,169	0/0:11,0:11:21.25:0,21,122	1/1:12,7:19:19.70:359,20,0	0/0:19,0:19:37.53:0,38,209	0/0:19,0:19:7.07:0,7,35	0/0:12,0:12:4.14:0,4,22	0/0:14,0:14:0.47:0,0,4	0/0:15,0:15:1.95:0,2,8	0/0:9,0:9:4.86:0,5,23	0/0:13,0:13:2.51:0,3,11	0/0:14,0:14:26.81:0,27,212	0/1:6,0:6:8.72:18,0,9	0/0:6,0:6:6.19:0,6,32	0/0:8,0:8:15.38:0,15,75
chr10	10116757	.	CCT	C	2500.19	PASS	AB=1.000;AC=34;AF=0.607;AN=56;BaseQRankSum=-0.375;DP=410;FS=14.043;HRun=0;HaplotypeScore=78.4678;InbreedingCoeff=0.1268;MQ=87.96;MQ0=1;MQRankSum=-2.285;QD=7.81;ReadPosRankSum=3.761;VQSLOD=1.9683;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:27:8.78:30,0,9	0/1:5,0:5:16.71:17,0,23	0/0:28,0:27:58.20:0,58,774	0/0:23,0:19:35.73:0,36,447	0/0:11,0:11:30.05:0,30,467	1/1:1,13:14:33.07:448,33,0	1/1:1,22:23:48.16:685,48,0	0/1:18,0:18:6.06:139,0,6	1/1:0,13:13:27.09:385,27,0	0/0:12,0:12:4.02:0,4,181	0/1:6,0:6:15.96:16,0,69	1/1:15,0:15:26.39:94,26,0	1/1:13,0:13:18.92:66,19,0	0/1:14,0:14:4.75:47,0,5	0/1:18,0:18:56.25:56,0,234	0/1:11,0:11:16.98:17,0,162	0/1:21,0:21:44.24:44,0,134	0/1:17,0:17:17.33:17,0,211	1/1:17,0:17:19.36:130,19,0	1/1:15,0:15:12.32:65,12,0	1/1:17,0:17:26.09:91,26,0	1/1:12,0:12:20.15:69,20,0	1/1:9,1:10:6.18:54,6,0	1/1:13,1:14:26.57:124,27,0	0/0:15,0:15:39.08:0,39,580	0/1:6,0:6:34.66:61,0,35	0/1:6,0:6:24.40:24,0,50	0/1:8,0:8:3.89:4,0,126
chr10	10116758	.	CT	C	5275.55	PASS	AB=0.962;AC=42;AF=0.750;AN=56;BaseQRankSum=-4.213;DP=420;FS=4.176;HRun=1;HaplotypeScore=67.5407;InbreedingCoeff=0.3766;MQ=89.04;MQ0=1;MQRankSum=-0.636;QD=15.52;ReadPosRankSum=0.974;VQSLOD=4.8222;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,25:26:18.06:246,18,0	1/1:5,0:5:0.38:55,0,0	0/0:27,0:25:34.97:0,35,480	0/0:26,0:22:29.43:0,29,357	0/0:13,0:13:26.41:0,26,323	1/1:14,0:14:32.21:188,32,0	1/1:22,1:23:46.79:270,47,0	1/1:3,15:18:38.62:384,39,0	1/1:13,0:13:26.32:151,26,0	0/1:13,0:13:10.29:10,0,33	0/1:6,1:7:10.10:54,0,10	1/1:0,15:15:32.78:426,33,0	1/1:0,13:13:24.05:329,24,0	1/1:0,13:13:21.04:289,21,0	0/1:19,0:19:54.30:69,0,54	0/1:11,0:11:28.81:29,0,38	1/1:25,0:25:28.77:172,29,0	0/1:15,2:17:31.67:122,0,32	1/1:0,17:17:50.95:618,51,0	1/1:0,15:15:27.03:331,27,0	1/1:0,17:17:33.11:456,33,0	1/1:0,12:12:27.09:367,27,0	1/1:1,9:10:8.30:78,8,0	1/1:1,13:14:33.02:430,33,0	0/0:14,0:14:30.05:0,30,384	1/1:5,1:6:8.78:91,9,0	1/1:4,2:6:2.50:98,2,0	0/1:11,0:11:12.70:13,0,21
chr10	10122166	.	CTG	C	16380.12	PASS	AB=0.726;AC=24;AF=0.462;AN=52;BaseQRankSum=4.805;DP=1554;FS=281.105;HRun=0;HaplotypeScore=503.1778;InbreedingCoeff=-0.8571;MQ=40.77;MQ0=82;MQRankSum=-4.766;QD=11.31;ReadPosRankSum=0.780;VQSLOD=0.0763;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:38,26:61:99:694,0,681	0/1:14,7:21:99:233,0,435	./.	./.	0/0:18,0:17:42.14:0,42,736	0/1:24,8:30:99:306,0,435	0/1:47,29:71:99:921,0,1386	0/1:51,29:53:99:807,0,925	0/1:56,23:73:99:708,0,1805	0/1:56,36:83:99:1125,0,1852	0/1:19,12:27:99:130,0,247	0/1:49,47:93:99:1308,0,1117	0/1:46,25:71:99:842,0,1394	0/1:55,30:82:99:906,0,1539	0/1:40,31:69:99:909,0,1036	0/1:36,28:63:99:1044,0,1161	0/1:24,9:30:99:255,0,593	0/1:25,12:36:99:397,0,817	0/1:35,7:20:99:270,0,465	0/1:30,15:44:99:569,0,387	0/1:96,54:137:99:1604,0,1637	0/1:25,23:45:99:515,0,494	0/1:19,18:33:99:500,0,261	0/1:35,25:59:99:466,0,839	0/0:20,0:20:60.19:0,60,1014	0/1:43,37:68:99:1033,0,1302	0/1:19,17:35:99:524,0,584	0/1:8,10:17:99:314,0,288
chr10	10122227	.	CTCAGCTGTGTGT	C	2067.74	PASS	AB=0.939;AC=8;AF=0.143;AN=56;BaseQRankSum=8.587;DP=1160;FS=2.338;HRun=0;HaplotypeScore=499.9504;InbreedingCoeff=0.0944;MQ=49.70;MQ0=18;MQRankSum=-8.111;QD=11.36;ReadPosRankSum=-3.925;VQSLOD=0.0266;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:56:99:0,104,3880	0/1:17,0:14:30.80:31,0,720	0/0:23,0:10:9.32:0,9,229	0/0:30,0:17:6.19:0,6,330	0/0:24,0:24:54.10:0,54,1851	1/1:7,6:13:8.60:619,9,0	0/1:14,4:16:16.93:459,0,17	0/1:39,0:31:6.52:7,0,1591	0/1:28,8:35:99:1047,0,121	0/0:57,0:52:99:0,132,4406	0/0:16,0:15:26.84:0,27,819	0/0:96,0:95:99:0,125,6075	0/0:53,0:52:99:0,101,3736	0/0:74,0:72:99:0,135,5431	0/0:62,0:61:93.86:0,94,4417	0/0:59,1:58:28.11:0,28,4208	0/0:27,0:25:60.20:0,60,2634	0/0:33,0:33:33.51:0,34,2838	0/1:30,0:27:19.73:20,0,1097	0/0:26,0:23:20.98:0,21,1923	0/0:152,0:144:99:0,185,11151	0/1:29,0:28:19.24:19,0,807	0/0:26,0:23:20.98:0,21,742	0/0:62,0:60:86.23:0,86,3972	0/0:13,0:13:30.10:0,30,1236	0/0:43,0:39:86.56:0,87,2818	0/0:31,0:31:68.25:0,68,2723	0/0:13,0:13:21.07:0,21,952
chr10	10122232	.	C	CTG	1173.79	PASS	AB=0.956;AC=16;AF=0.286;AN=56;BaseQRankSum=13.537;DP=1242;FS=59.695;HRun=0;HaplotypeScore=361.1444;InbreedingCoeff=-0.2046;MQ=48.05;MQ0=27;MQRankSum=-10.110;QD=1.72;ReadPosRankSum=-6.071;VQSLOD=-0.5561;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:56,2:57:96.31:0,96,1264	0/1:22,1:19:65.94:66,0,287	0/0:18,0:9:15.50:0,15,185	0/0:29,0:16:19.08:0,19,221	0/0:25,0:25:57.04:0,57,714	0/1:16,0:16:31.22:172,0,31	1/1:24,1:15:18.03:203,18,0	0/0:40,0:31:34.44:0,34,902	0/1:34,0:36:99:362,0,129	0/1:63,5:61:94.37:94,0,1539	0/0:21,0:20:21.74:0,22,268	0/1:89,7:96:99:123,0,1873	0/1:49,1:52:27.88:28,0,1128	0/0:79,5:82:14:0,14,1695	0/1:59,3:61:42.38:42,0,1250	0/1:57,1:56:29.73:30,0,1110	0/1:29,1:28:11.53:12,0,692	0/1:36,0:36:5.09:5,0,843	0/1:31,0:28:99:148,0,493	0/0:32,0:28:19.30:0,19,533	0/0:158,1:155:99:0,199,3666	0/1:33,0:32:12.18:12,0,338	0/0:30,0:26:17.62:0,18,224	0/1:58,1:58:3.59:4,0,953	0/0:14,0:14:30.10:0,30,399	0/1:42,3:43:34.40:34,0,1006	0/0:30,1:31:20.47:0,20,867	0/0:13,0:13:27.09:0,27,359
chr10	10123667	.	T	TCACACACACA	2255.26	PASS	AB=0.975;AC=7;AF=0.125;AN=56;BaseQRankSum=-0.990;DP=954;FS=2.553;HRun=0;HaplotypeScore=255.5558;InbreedingCoeff=0.7313;MQ=58.40;MQ0=8;MQRankSum=-8.124;QD=14.01;ReadPosRankSum=-2.128;VQSLOD=2.4433;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:63,0:63:99:0,140,3793	0/0:10,0:10:24.08:0,24,606	0/0:45,0:20:6.40:0,6,420	0/0:52,0:30:12.74:0,13,604	0/0:29,0:30:69.20:0,69,1762	1/1:12,20:37:20.09:1143,20,0	1/1:19,27:53:3.21:363,3,0	0/0:36,0:36:12.43:0,12,1130	1/1:7,22:32:20.71:820,21,0	0/0:33,0:33:69.05:0,69,1740	0/0:28,0:28:63.18:0,63,1547	0/0:26,0:27:60.20:0,60,1694	0/0:22,0:22:51.15:0,51,1370	0/0:28,0:29:78.17:0,78,1971	0/0:38,0:38:84.26:0,84,2198	0/1:37,1:39:66.91:67,0,2022	0/0:36,0:37:81.23:0,81,2131	0/0:22,0:22:51.13:0,51,1201	0/0:17,0:17:35.22:0,35,810	0/0:28,0:29:69.22:0,69,1903	0/0:66,0:66:83.75:0,84,3281	0/0:35,0:35:93.22:0,93,2429	0/0:21,0:23:45.15:0,45,1187	0/0:48,0:48:99:0,108,2761	0/0:17,0:17:45.15:0,45,1321	0/0:38,0:38:72.22:0,72,1928	0/0:29,0:30:57.69:0,58,1891	0/0:16,0:16:42.14:0,42,1227
chr10	10124800	.	TCACACACACACACA	T	10787.01	PASS	AB=0.775;AC=37;AF=0.661;AN=56;BaseQRankSum=2.785;DP=724;FS=33.166;HRun=0;HaplotypeScore=277.0067;InbreedingCoeff=0.3657;MQ=61.47;MQ0=12;MQRankSum=-4.609;QD=20.66;ReadPosRankSum=1.446;VQSLOD=2.7867;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:26,7:34:3.08:551,0,3	1/1:6,13:18:23.82:703,24,0	0/0:49,0:29:9.02:0,9,114	0/0:49,0:28:5.99:0,6,77	0/0:11,0:19:26.24:0,26,783	1/1:3,0:13:10.03:50,10,0	0/0:13,0:26:6.16:0,6,197	0/1:12,5:17:68.95:242,0,69	0/1:7,0:20:44.09:44,0,117	1/1:19,10:29:25.95:638,26,0	1/1:9,8:15:9.03:202,9,0	1/1:11,15:29:23.29:636,23,0	1/1:12,18:30:33.07:972,33,0	0/1:14,16:30:3.89:546,0,4	1/1:13,23:39:43.82:1041,44,0	1/1:11,14:27:24.08:776,24,0	1/1:14,4:18:21.07:533,21,0	0/1:12,1:14:49.31:127,0,49	0/1:12,5:14:6.90:372,0,7	1/1:15,20:35:21.45:387,21,0	0/1:38,1:38:23.34:205,0,23	1/1:10,8:17:2.99:74,3,0	1/1:11,5:19:15.52:219,16,0	0/0:17,10:27:2.90:0,3,47	0/0:20,0:31:39.11:0,39,1137	1/1:13,16:29:38.42:1414,38,0	1/1:7,11:19:26.96:745,27,0	1/1:0,7:7:9.03:312,9,0
chr10	10125090	.	GCACACACACATA	G	17204.98	PASS	AB=0.700;AC=41;AF=0.732;AN=56;BaseQRankSum=7.427;DP=894;FS=1.636;HRun=0;HaplotypeScore=317.2717;InbreedingCoeff=0.8169;MQ=43.83;MQ0=16;MQRankSum=-8.958;QD=29.71;ReadPosRankSum=-0.682;VQSLOD=3.2585;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:20,15:34:27.28:107,0,27	1/1:5,12:17:21.43:520,21,0	0/0:51,0:21:29.52:0,30,746	0/0:75,0:28:54.18:0,54,2108	0/0:20,0:20:48.16:0,48,2311	0/0:35,0:35:93.08:0,93,4488	0/0:34,0:33:90.27:0,90,4345	1/1:22,11:30:28.32:1443,28,0	0/0:76,0:76:99:0,183,9294	1/1:13,18:31:81.25:2536,81,0	1/1:9,11:20:6.02:140,6,0	1/1:13,33:46:47.13:1252,47,0	1/1:11,15:26:33.11:938,33,0	1/1:10,21:31:14.53:399,15,0	1/1:24,26:48:36.12:875,36,0	1/1:14,25:39:26.08:540,26,0	1/1:6,3:9:18.06:555,18,0	1/1:14,7:21:39.12:1058,39,0	1/1:9,8:13:33.11:1035,33,0	1/1:10,16:26:9.14:236,9,0	1/1:34,11:45:17.81:261,18,0	1/1:10,10:20:9.03:210,9,0	1/1:5,6:11:3.01:49,3,0	1/1:22,4:26:5.75:87,6,0	0/0:23,0:23:57.20:0,57,2893	1/1:14,28:42:99:3572,108,0	1/1:7,13:20:32.26:1078,32,0	1/1:9,4:13:12.04:313,12,0
chr10	10125098	.	A	ACT	5371.50	PASS	AB=0.917;AC=29;AF=0.518;AN=56;BaseQRankSum=0.706;DP=810;FS=7.006;HRun=0;HaplotypeScore=252.4072;InbreedingCoeff=0.0415;MQ=40.54;MQ0=17;MQRankSum=0.088;QD=10.64;ReadPosRankSum=-7.501;VQSLOD=1.7528;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:28,3:30:25.31:104,0,25	0/1:15,1:16:1.35:238,0,1	0/0:49,0:17:39.37:0,39,441	0/0:66,0:23:59.94:0,60,821	0/0:19,0:19:48.15:0,48,705	0/0:36,0:36:99:0,99,1424	0/0:37,0:36:99:0,99,1403	0/1:22,3:22:28.47:583,0,28	0/0:72,0:72:99:0,195,2835	0/1:28,2:30:99:457,0,110	1/1:16,1:17:6.02:116,6,0	0/1:40,2:42:44.40:319,0,44	0/1:20,3:23:15.94:343,0,16	0/1:25,1:26:9.87:110,0,10	1/1:42,4:44:24:580,24,0	1/1:34,2:36:15.48:395,15,0	0/1:6,2:8:14:100,0,14	0/1:15,2:17:26.20:310,0,26	0/1:14,1:12:25.51:299,0,26	1/1:20,2:22:8.31:165,8,0	1/1:33,5:38:12.02:253,12,0	1/1:15,0:15:8.29:160,8,0	1/1:9,0:9:3.01:49,3,0	1/1:18,5:22:5.88:86,6,0	0/0:24,0:24:63.19:0,63,921	0/1:36,3:38:99:400,0,192	0/1:17,2:20:20.27:222,0,20	0/1:7,0:7:10.87:84,0,11
chr10	10125101	.	TACA	T	2400.58	PASS	AB=0.936;AC=25;AF=0.446;AN=56;BaseQRankSum=14.396;DP=786;FS=5.329;HRun=0;HaplotypeScore=271.1843;InbreedingCoeff=0.1582;MQ=40.63;MQ0=16;MQRankSum=-11.212;QD=5.87;ReadPosRankSum=1.080;VQSLOD=2.2548;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,2:31:7.13:0,7,85	1/1:17,0:17:8.97:69,9,0	0/0:49,0:19:44.84:0,45,819	0/0:60,0:20:57.20:0,57,1305	0/0:20,0:20:51.17:0,51,1172	0/0:31,0:31:89.86:0,90,2057	0/0:36,0:35:96.76:0,97,2181	0/1:22,0:22:99:181,0,115	0/0:69,0:69:99:0,192,4410	1/1:25,0:27:39.11:447,39,0	1/1:15,2:17:3.39:17,3,0	0/1:40,0:43:99:153,0,138	0/1:23,0:24:35.79:155,0,36	0/1:27,1:28:60.80:66,0,61	0/1:42,2:44:99:120,0,118	0/1:33,1:35:21.19:21,0,25	1/1:6,2:8:3.32:123,3,0	0/1:14,0:15:6.15:146,0,6	1/1:12,0:11:8.97:183,9,0	0/1:20,2:22:31.42:47,0,31	0/0:29,4:36:15.43:0,15,158	0/1:15,1:17:17.35:17,0,81	0/1:8,1:9:2.32:2,0,11	0/0:17,3:19:0.47:0,0,2	0/0:24,0:24:63.22:0,63,1478	1/1:34,2:37:65.51:627,66,0	0/1:21,0:22:3.61:164,0,4	1/1:4,0:4:5.93:40,6,0
chr10	10125161	.	TAC	T	20007.18	PASS	AB=0.612;AC=39;AF=0.696;AN=56;BaseQRankSum=10.669;DP=1077;FS=8.913;HRun=0;HaplotypeScore=279.0922;InbreedingCoeff=0.7528;MQ=48.59;MQ0=19;MQRankSum=0.801;QD=23.99;ReadPosRankSum=3.547;VQSLOD=3.9135;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,25:36:49.97:754,50,0	1/1:1,16:17:27.08:355,27,0	0/0:41,0:12:30.09:0,30,477	0/0:40,0:13:15.89:0,16,228	0/0:22,0:22:57.18:0,57,949	0/0:26,0:26:75.22:0,75,1230	0/0:33,0:33:90.29:0,90,1505	1/1:8,38:42:88.29:1149,88,0	0/0:51,0:51:99:0,129,2170	1/1:8,48:54:99:1772,135,0	1/1:4,19:23:39.02:512,39,0	1/1:8,47:54:73.48:1345,73,0	1/1:1,51:52:99:1612,123,0	1/1:2,43:44:84.27:1104,84,0	1/1:3,50:53:99:1341,102,0	1/1:8,47:53:62.92:1407,63,0	0/1:4,19:24:18.16:613,0,18	0/1:13,19:32:66.09:700,0,66	0/1:12,14:23:9.32:470,0,9	1/1:4,32:36:57.05:749,57,0	1/1:27,45:72:45.22:1241,45,0	1/1:3,36:39:59.86:788,60,0	1/1:1,21:22:42.11:552,42,0	1/1:10,30:42:43.51:557,44,0	0/0:30,0:30:78.27:0,78,1337	1/1:7,44:50:99:1728,132,0	1/1:2,30:31:72.23:943,72,0	1/1:0,14:14:24.08:315,24,0
chr10	10125323	.	TACAC	T	1473.03	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-4.585;DP=927;FS=6.155;HRun=0;HaplotypeScore=232.6683;InbreedingCoeff=0.9251;MQ=55.30;MQ0=15;MQRankSum=1.156;QD=16.93;ReadPosRankSum=1.069;VQSLOD=2.4591;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:39:52.03:0,52,921	0/0:3,0:11:15.05:0,15,280	0/0:34,0:18:6.01:0,6,65	0/0:33,0:19:7.56:0,8,89	0/0:13,0:29:41.34:0,41,611	1/1:6,17:23:33.11:537,33,0	1/1:15,15:31:24.08:376,24,0	0/0:23,0:37:51.86:0,52,684	1/1:11,21:33:20.86:702,21,0	0/0:13,0:32:60.07:0,60,839	0/0:9,0:27:32.80:0,33,552	0/0:30,0:46:26.18:0,26,1287	0/0:17,0:44:63.23:0,63,1052	0/0:16,0:34:66.19:0,66,1149	0/0:18,0:44:51.06:0,51,795	0/0:10,0:37:64.50:0,64,1000	0/0:23,0:33:69.74:0,70,1021	0/0:32,0:33:84.29:0,84,1932	0/0:15,0:26:47.86:0,48,713	0/0:6,0:20:34.24:0,34,553	0/0:37,0:54:99:0,119,1761	0/0:11,0:28:45.15:0,45,774	0/0:17,0:29:27.53:0,28,441	0/0:35,0:49:68.88:0,69,1138	0/0:22,0:34:50.75:0,51,1074	0/0:14,0:42:76.62:0,77,1093	0/0:9,0:23:27:0,27,355	0/0:10,0:15:15.94:0,16,264
chr10	10126618	.	T	TA	8703.92	PASS	AB=0.590;AC=45;AF=0.804;AN=56;BaseQRankSum=-9.894;DP=574;FS=0.991;HRun=10;HaplotypeScore=87.8474;InbreedingCoeff=0.8754;MQ=73.49;MQ0=0;MQRankSum=1.489;QD=17.84;ReadPosRankSum=2.629;VQSLOD=5.3949;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,0:39:85.56:436,86,0	1/1:1,6:7:18.05:192,18,0	0/0:20,0:19:26.01:0,26,223	0/0:12,0:11:19.99:0,20,150	1/1:4,27:31:62.39:741,62,0	0/0:21,0:22:53.13:0,53,413	0/0:15,0:15:35.48:0,35,267	1/1:6,1:20:43.20:245,43,0	0/0:17,0:17:41.68:0,42,332	1/1:5,16:21:20.50:417,21,0	1/1:5,18:23:32.51:549,33,0	1/1:3,1:20:48.86:280,49,0	1/1:3,0:17:46.06:258,46,0	1/1:2,0:16:31.24:156,31,0	1/1:6,22:28:57.05:587,57,0	1/1:6,15:21:14.46:360,14,0	1/1:5,21:26:60.15:640,60,0	1/1:2,22:25:53.97:558,54,0	1/1:6,0:20:40.04:207,40,0	1/1:1,1:26:71.68:395,72,0	1/1:2,0:10:14.37:79,14,0	1/1:5,1:21:40.14:224,40,0	1/1:2,0:22:32.64:258,33,0	1/1:2,2:15:31.42:174,31,0	1/1:0,13:14:35.92:366,36,0	1/1:1,29:30:71.49:892,71,0	0/1:7,16:23:25.65:339,0,26	1/1:0,13:13:33.08:352,33,0
chr10	10126642	.	CTACT	C	2525.82	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=3.213;DP=560;FS=6.661;HRun=0;HaplotypeScore=127.9981;InbreedingCoeff=0.9982;MQ=79.55;MQ0=0;MQRankSum=-5.166;QD=44.31;ReadPosRankSum=3.354;VQSLOD=4.2749;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,99,2691	0/0:7,0:7:21.06:0,21,512	0/0:20,0:20:50.51:0,51,1180	0/0:17,0:17:48.06:0,48,1170	0/0:22,0:22:66.23:0,66,1787	1/1:1,20:21:54.19:1045,54,0	1/1:0,17:17:45.15:870,45,0	0/0:25,0:25:63.22:0,63,1723	1/1:1,18:19:39.13:753,39,0	0/0:22,0:22:66.23:0,66,1793	0/0:19,0:19:57.20:0,57,1539	0/0:18,0:18:51.18:0,51,1349	0/0:16,0:16:48.16:0,48,1304	0/0:17,0:17:45.15:0,45,1157	0/0:22,0:22:60.19:0,60,1584	0/0:24,0:24:69.24:0,69,1851	0/0:29,0:29:87.30:0,87,2293	0/0:27,0:27:63.22:0,63,1650	0/0:19,0:19:57.15:0,57,1482	0/0:21,0:21:60.19:0,60,1541	0/0:12,0:12:30.10:0,30,805	0/0:21,0:21:63.22:0,63,1708	0/0:23,0:23:63.20:0,63,1662	0/0:16,0:16:42.14:0,42,1106	0/0:14,0:14:36.12:0,36,986	0/0:21,0:21:63.22:0,63,1688	0/0:19,0:19:53.62:0,54,1404	0/0:15,0:15:36.12:0,36,972
chr10	10127742	.	TG	T	1783.91	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.947;DP=552;FS=3.949;HRun=1;HaplotypeScore=55.7234;InbreedingCoeff=0.9985;MQ=97.17;MQ0=0;MQRankSum=-2.339;QD=34.31;ReadPosRankSum=0.624;VQSLOD=3.2857;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,105,1648	0/0:10,0:10:24.08:0,24,383	0/0:32,0:32:92.56:0,93,1374	0/0:22,0:22:63.17:0,63,925	0/0:13,0:13:39.09:0,39,595	1/1:0,17:17:51.17:713,51,0	1/1:0,22:22:54.18:754,54,0	0/0:36,0:36:99:0,108,1625	1/1:0,13:13:33.11:460,33,0	0/0:22,0:22:66.20:0,66,1011	0/0:13,0:13:39.13:0,39,621	0/0:18,0:18:54.14:0,54,793	0/0:14,0:14:42.10:0,42,621	0/0:21,0:21:63.19:0,63,979	0/0:22,0:22:66.21:0,66,1029	0/0:22,0:22:66.20:0,66,996	0/0:20,0:20:60.16:0,60,909	0/0:12,0:12:36.12:0,36,574	0/0:22,0:22:65.70:0,66,993	0/0:10,0:10:30.09:0,30,453	0/0:24,0:24:66.23:0,66,1052	0/0:19,0:19:54.14:0,54,791	0/0:25,0:25:69.22:0,69,1075	0/0:21,0:21:63.14:0,63,928	0/0:19,0:19:54.16:0,54,834	0/0:15,0:15:45.13:0,45,657	0/0:22,0:22:66.21:0,66,1031	0/0:10,0:10:26.88:0,27,430
chr10	10127897	.	GTTA	G	1377.62	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=11.413;DP=754;FS=1.163;HRun=0;HaplotypeScore=113.4263;InbreedingCoeff=0.9933;MQ=91.48;MQ0=0;MQRankSum=-6.456;QD=24.17;ReadPosRankSum=1.971;VQSLOD=3.4765;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:61,0:61:99:0,181,3962	0/0:12,0:12:33.11:0,33,729	0/0:30,0:30:84.22:0,84,1687	0/0:33,0:33:82.40:0,82,1985	0/0:27,0:27:81.28:0,81,1824	1/1:3,9:12:14.46:309,14,0	1/1:3,16:19:48.09:485,48,0	0/0:36,0:36:99:0,102,2133	1/1:6,20:26:52.13:724,52,0	0/0:20,0:20:57.20:0,57,1257	0/0:21,0:21:63.22:0,63,1388	0/0:31,0:31:90.30:0,90,1966	0/0:19,0:19:57.20:0,57,1291	0/0:30,0:30:84.29:0,84,1892	0/0:33,0:33:99:0,99,2222	0/0:28,0:28:84.29:0,84,1904	0/0:32,0:32:87.30:0,87,1937	0/0:24,0:24:69.24:0,69,1536	0/0:27,0:27:78.27:0,78,1764	0/0:12,0:12:36.12:0,36,812	0/0:35,0:35:99:0,102,2112	0/0:29,0:29:87.30:0,87,1938	0/0:28,0:28:84.29:0,84,1900	0/0:31,0:31:93.32:0,93,2085	0/0:26,0:26:78.27:0,78,1734	0/0:40,0:40:99:0,117,2636	0/0:21,0:21:63.22:0,63,1408	0/0:11,0:11:33.11:0,33,748
chr10	10127904	.	CA	C	1159.34	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=11.374;DP=768;FS=0.000;HRun=1;HaplotypeScore=84.9229;InbreedingCoeff=0.9996;MQ=90.98;MQ0=0;MQRankSum=-7.162;QD=19.01;ReadPosRankSum=1.833;VQSLOD=3.8905;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:62,0:62:99:0,184,2848	0/0:11,0:11:33.11:0,33,527	0/0:30,0:30:90.31:0,90,1424	0/0:33,0:33:89.18:0,89,1473	0/0:30,0:30:90.28:0,90,1384	1/1:2,9:11:30.01:276,30,0	1/1:2,20:22:50.74:398,51,0	0/0:35,0:35:99:0,105,1634	1/1:4,24:28:52.97:628,53,0	0/0:20,0:20:60.19:0,60,937	0/0:26,0:26:69.24:0,69,1098	0/0:30,0:30:90.29:0,90,1413	0/0:21,0:21:63.21:0,63,1006	0/0:29,0:29:87.28:0,87,1365	0/0:32,0:32:96.33:0,96,1533	0/0:30,0:30:90.31:0,90,1439	0/0:29,0:29:87.27:0,87,1362	0/0:25,0:25:75.19:0,75,1145	0/0:33,0:33:99:0,99,1469	0/0:14,0:14:42.14:0,42,671	0/0:30,0:30:90.31:0,90,1437	0/0:29,0:29:87.30:0,87,1388	0/0:28,0:28:84.29:0,84,1343	0/0:33,0:33:99:0,99,1555	0/0:25,0:25:75.26:0,75,1199	0/0:39,0:39:99:0,111,1752	0/0:22,0:22:66.23:0,66,1052	0/0:11,0:11:33.11:0,33,528
chr10	10130887	.	TG	T	12481.96	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=3.522;DP=742;FS=6.282;HRun=9;HaplotypeScore=84.9339;InbreedingCoeff=0.9974;MQ=73.15;MQ0=0;MQRankSum=-3.249;QD=21.82;ReadPosRankSum=3.425;VQSLOD=5.6167;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,38:43:99:988,108,0	1/1:0,13:13:39.02:357,39,0	0/0:23,0:24:27.12:0,27,313	0/0:29,0:28:31.37:0,31,579	0/0:17,1:18:17.68:0,18,446	0/0:15,0:15:45.12:0,45,509	0/0:27,2:29:44.72:0,45,749	1/1:8,27:35:75.01:681,75,0	0/0:32,1:33:54.22:0,54,853	1/1:4,20:24:57.02:522,57,0	1/1:4,14:18:42.02:384,42,0	1/1:10,20:30:22.40:460,22,0	1/1:7,21:28:78.04:713,78,0	1/1:5,30:35:90.04:824,90,0	1/1:3,23:27:62.06:555,62,0	1/1:5,14:19:39.01:357,39,0	1/1:2,22:24:63.03:577,63,0	1/1:1,20:21:57.03:522,57,0	1/1:6,16:22:51:464,51,0	1/1:6,10:16:33.01:301,33,0	1/1:6,51:57:99:1223,135,0	1/1:2,25:27:43.38:651,43,0	1/1:5,21:26:54.02:493,54,0	1/1:7,32:39:96.04:879,96,0	0/0:21,1:22:33.59:0,34,622	1/1:4,27:31:75:681,75,0	1/1:3,22:25:60.03:549,60,0	1/1:1,11:12:33.02:302,33,0
chr10	10134391	.	TGG	T	1794.59	PASS	AB=0.824;AC=25;AF=0.463;AN=54;BaseQRankSum=-3.280;DP=293;FS=5.542;HRun=12;HaplotypeScore=45.6906;InbreedingCoeff=0.4523;MQ=78.71;MQ0=1;MQRankSum=0.527;QD=9.50;ReadPosRankSum=3.479;VQSLOD=0.6374;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:9,10:19:20.99:212,21,0	0/0:0,0:2:5.09:0,5,18	0/0:18,0:16:1.40:0,1,167	0/0:8,0:7:8.33:0,8,66	0/1:8,2:10:18.53:19,0,60	0/0:2,0:2:3.01:0,3,44	0/0:10,0:13:12.20:0,12,65	1/1:3,5:9:12:122,12,0	0/0:9,0:8:5.98:0,6,64	0/0:6,1:9:5.09:0,5,18	0/0:3,0:3:2.99:0,3,24	1/1:6,6:12:23.55:242,24,0	1/1:7,11:18:30.04:296,30,0	1/1:4,6:11:14.75:134,15,0	0/1:5,1:11:12.53:13,0,35	1/1:1,6:7:12.02:122,12,0	0/1:14,1:16:14.37:14,0,58	0/0:11,0:13:20.95:0,21,122	1/1:15,1:16:17.92:156,18,0	0/0:3,1:4:0.47:0,0,1	0/1:9,0:9:15.01:15,0,60	1/1:2,6:8:15.02:152,15,0	1/1:4,4:8:9.01:91,9,0	1/1:10,13:23:36.06:366,36,0	0/1:8,1:12:4.84:24,0,5	0/0:5,0:11:17.70:0,18,99	0/0:6,0:10:7.49:0,7,27	./.
chr10	10134988	.	CTT	C	6107.13	PASS	AB=1.000;AC=44;AF=0.786;AN=56;BaseQRankSum=-3.653;DP=569;FS=0.000;HRun=3;HaplotypeScore=99.4188;InbreedingCoeff=0.6498;MQ=59.75;MQ0=15;MQRankSum=-0.167;QD=13.05;ReadPosRankSum=3.250;VQSLOD=1.8895;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:27:23.99:216,24,0	0/1:7,0:7:15:61,0,15	0/0:28,0:13:26.17:0,26,297	0/0:41,0:23:46.65:0,47,434	0/0:16,1:16:26.62:0,27,241	1/1:25,1:24:22.68:285,23,0	1/1:24,0:23:56.76:452,57,0	1/1:25,0:25:59.55:538,60,0	1/1:14,2:14:26.61:203,27,0	1/1:12,0:12:10.11:245,10,0	1/1:9,0:9:11.78:96,12,0	0/1:21,0:20:3.10:216,0,3	1/1:14,0:14:29.87:251,30,0	1/1:17,0:17:32.09:248,32,0	0/1:11,0:11:1.25:106,0,1	1/1:21,0:21:40.17:300,40,0	1/1:26,0:26:30.18:296,30,0	1/1:22,0:21:35.16:265,35,0	1/1:19,0:16:41.17:341,41,0	1/1:4,18:23:10.90:72,11,0	1/1:12,0:12:26.93:218,27,0	1/1:20,0:20:26.87:273,27,0	1/1:19,0:19:32.36:300,32,0	1/1:34,0:32:13.85:283,14,0	0/0:15,0:15:20.99:0,21,205	1/1:27,0:26:21.39:366,21,0	1/1:13,1:13:29.61:211,30,0	0/1:19,0:19:1.70:265,0,2
chr10	10134990	.	T	TTCTC	748.78	PASS	AB=0.996;AC=34;AF=0.680;AN=50;BaseQRankSum=-1.573;DP=573;FS=1.028;HRun=0;HaplotypeScore=140.9640;InbreedingCoeff=0.0775;MQ=56.34;MQ0=18;MQRankSum=-1.522;QD=1.68;ReadPosRankSum=-0.278;VQSLOD=2.6036;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:26:3.79:45,4,0	./.	./.	0/1:39,0:21:0:0,0,0	1/1:17,0:16:5.52:37,6,0	0/1:26,0:24:1.49:1,0,18	0/0:27,0:26:0.46:0,0,1	1/1:26,0:26:7.05:37,7,0	1/1:16,0:15:9.45:116,9,0	0/1:13,0:13:25.97:27,0,26	1/1:9,0:9:3:25,3,0	0/0:21,0:20:14.99:0,15,138	1/1:14,0:14:2.13:19,2,0	1/1:17,0:17:2.43:9,2,0	0/0:11,0:12:2.48:0,2,31	1/1:21,0:22:12.22:56,12,0	0/1:27,0:26:14.67:74,0,15	1/1:22,0:21:13.78:73,14,0	0/1:19,0:16:12.53:19,0,13	1/1:21,0:21:0.47:1,0,0	1/1:10,0:10:2.99:23,3,0	0/1:20,0:20:17.50:18,0,17	0/0:17,0:17:3.84:0,4,13	0/1:34,0:32:17.75:18,0,58	./.	0/1:27,0:27:12.95:172,0,13	1/1:14,0:13:6.89:43,7,0	1/1:20,0:20:4.59:70,5,0
chr10	10135140	.	C	CTCTG	26383.42	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-5.599;DP=678;FS=11.913;HRun=0;HaplotypeScore=128.9556;InbreedingCoeff=0.9699;MQ=54.27;MQ0=16;MQRankSum=-0.054;QD=46.37;ReadPosRankSum=3.425;VQSLOD=5.4625;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,46:49:90.31:2321,90,0	1/1:1,4:5:15.03:313,15,0	0/0:33,0:16:37.25:0,37,499	0/0:32,0:14:12.82:0,13,306	0/0:22,0:21:52.04:0,52,866	1/1:4,31:35:51.17:1301,51,0	1/1:2,24:27:45.15:1168,45,0	1/1:6,11:14:30.10:607,30,0	1/1:3,25:28:45.13:1163,45,0	1/1:4,25:28:75.08:1487,75,0	1/1:11,10:21:42.14:955,42,0	1/1:2,17:18:36.12:935,36,0	1/1:2,20:22:51.18:1320,51,0	1/1:1,14:16:40.95:1018,41,0	1/1:16,14:30:63.11:1254,63,0	1/1:8,12:19:39.13:964,39,0	1/1:5,25:30:53.78:1314,54,0	1/1:3,2:5:9.03:232,9,0	1/1:13,8:19:42.12:885,42,0	1/1:10,16:25:57.14:1243,57,0	1/1:10,11:21:39.11:863,39,0	1/1:8,13:21:45.14:1079,45,0	1/1:4,24:28:39.13:988,39,0	1/1:8,22:30:44.73:1107,45,0	0/0:22,0:22:45.14:0,45,770	1/1:5,27:31:87.21:1859,87,0	1/1:8,17:27:75.22:1736,75,0	1/1:5,2:7:18:272,18,0
chr10	10135163	.	A	AAC	5205.96	PASS	AB=0.747;AC=26;AF=0.464;AN=56;BaseQRankSum=-4.530;DP=676;FS=1.490;HRun=0;HaplotypeScore=199.6469;InbreedingCoeff=0.2751;MQ=53.46;MQ0=20;MQRankSum=-4.217;QD=13.01;ReadPosRankSum=-2.601;VQSLOD=4.4696;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:75.22:0,75,863	0/1:3,3:6:22.62:117,0,23	0/0:34,0:17:3.01:0,3,32	0/1:20,0:11:7.25:19,0,7	0/1:11,13:22:4.56:388,0,5	0/0:23,0:25:29.74:0,30,294	0/0:23,0:24:23.87:0,24,235	0/1:21,2:21:32.43:253,0,32	0/0:25,0:24:32.78:0,33,367	0/1:17,7:24:86.54:387,0,87	1/1:7,11:18:21.07:298,21,0	0/0:20,0:19:36.08:0,36,397	0/0:26,0:26:39.55:0,40,435	0/0:20,0:20:34.07:0,34,400	0/1:14,15:28:72.64:532,0,73	0/1:10,9:19:73.88:296,0,74	1/1:24,7:29:20.81:307,21,0	1/1:7,6:13:7.26:162,7,0	0/1:12,6:16:13.57:259,0,14	1/1:17,0:30:18:158,18,0	0/1:16,11:27:48.25:212,0,48	0/0:6,0:18:19.95:0,20,100	0/0:27,0:27:38.90:0,39,414	0/1:18,18:36:11.25:302,0,11	1/1:7,12:19:18.06:276,18,0	1/1:19,9:26:41:602,41,0	1/1:15,12:28:33.11:498,33,0	1/1:1,4:5:9.03:140,9,0
chr10	10135186	.	ACACT	A	81.70	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=3.787;DP=661;FS=5.365;HRun=0;HaplotypeScore=189.2882;InbreedingCoeff=0.1903;MQ=49.63;MQ0=20;MQRankSum=-5.467;QD=1.03;ReadPosRankSum=-2.646;VQSLOD=1.8823;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,102,1968	0/0:8,0:7:18.03:0,18,296	1/1:15,0:3:4.07:12,4,0	0/1:26,0:16:9.63:10,0,146	0/0:23,0:21:50.94:0,51,736	0/0:25,0:25:26.72:0,27,826	0/0:24,0:24:44.98:0,45,613	0/0:30,0:28:45.96:0,46,827	0/0:33,0:30:57.06:0,57,1035	0/0:23,0:22:56.67:0,57,958	0/0:13,0:13:27.06:0,27,451	0/0:19,0:18:44.89:0,45,936	0/0:21,0:21:54.10:0,54,996	0/0:24,0:24:53.37:0,53,769	0/0:30,1:30:45.19:0,45,1120	0/0:16,0:16:33.09:0,33,630	0/0:24,0:22:15.17:0,15,442	0/1:20,0:18:5.86:6,0,222	0/0:20,0:17:29.22:0,29,486	0/0:27,4:31:44.12:0,44,606	0/0:28,0:27:29.40:0,29,569	0/1:18,0:18:68.26:153,0,68	0/0:27,0:26:60.02:0,60,1026	0/0:33,0:33:20.40:0,20,649	0/0:22,0:22:25.22:0,25,470	0/0:27,0:25:31.32:0,31,775	0/0:20,0:20:1.55:0,2,467	0/0:7,0:7:2.49:0,2,153
chr10	10136675	.	GGTGT	G	702.35	PASS	AB=0.907;AC=22;AF=0.550;AN=40;BaseQRankSum=3.087;DP=491;FS=6.236;HRun=0;HaplotypeScore=82.2402;InbreedingCoeff=0.4095;MQ=67.33;MQ0=17;MQRankSum=-0.507;QD=3.41;ReadPosRankSum=2.139;VQSLOD=1.0680;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:20,3:22:3.01:46,3,0	./.	./.	./.	0/0:11,0:13:6.02:0,6,119	./.	1/1:23,3:26:11.01:159,11,0	0/0:27,0:25:0.47:0,0,1	1/1:10,1:13:12:126,12,0	./.	1/1:12,2:14:3.01:46,3,0	./.	1/1:11,0:12:3:28,3,0	1/1:14,1:15:3.01:46,3,0	1/1:16,2:19:3.01:46,3,0	1/1:10,1:11:3.01:46,3,0	0/1:25,5:29:4.53:125,0,5	./.	0/0:20,0:20:10.28:0,10,171	0/0:12,0:12:3:0,3,25	0/0:39,0:36:27.06:0,27,445	0/0:12,3:16:0:0,0,0	./.	0/1:21,1:22:2.21:41,0,2	0/0:11,0:11:12.03:0,12,202	0/0:14,0:14:0.47:0,0,1	1/1:8,0:9:3:28,3,0	1/1:9,3:9:6.02:92,6,0
chr10	10137194	.	A	AT	21999.60	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-12.377;DP=731;FS=0.860;HRun=4;HaplotypeScore=68.6275;InbreedingCoeff=0.9986;MQ=87.74;MQ0=0;MQRankSum=-7.041;QD=35.60;ReadPosRankSum=3.458;VQSLOD=5.1923;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,53:54:99:1845,135,0	1/1:0,11:11:30.10:409,30,0	0/0:34,0:33:66.91:0,67,765	0/0:23,0:23:51.11:0,51,560	0/0:28,0:28:78.22:0,78,883	1/1:1,27:28:78.26:1067,78,0	1/1:1,22:23:60.20:820,60,0	1/1:5,33:38:96.31:1297,96,0	1/1:2,19:21:54.18:738,54,0	1/1:0,32:33:96.26:1250,96,0	1/1:0,16:16:42.07:551,42,0	1/1:1,26:28:69.23:940,69,0	1/1:0,28:28:75.25:1025,75,0	1/1:0,27:27:72.24:983,72,0	1/1:3,22:25:57.19:779,57,0	1/1:0,18:18:45.15:615,45,0	1/1:4,38:42:99:1639,120,0	1/1:1,28:29:78.26:1067,78,0	1/1:2,16:19:48.10:604,48,0	1/1:5,18:23:54.14:717,54,0	1/1:1,45:46:99:1763,129,0	1/1:1,21:22:63.21:861,63,0	1/1:0,12:12:29.89:409,30,0	1/1:1,25:26:69.23:943,69,0	0/0:28,0:28:72.15:0,72,778	1/1:4,13:17:42.14:572,42,0	1/1:2,21:23:60.20:818,60,0	1/1:0,9:9:21.07:287,21,0
chr10	10139052	.	GTGA	G	2165.36	PASS	AB=0.934;AC=15;AF=0.268;AN=56;BaseQRankSum=0.497;DP=1439;FS=39.371;HRun=0;HaplotypeScore=423.5324;InbreedingCoeff=-0.2480;MQ=41.93;MQ0=68;MQRankSum=-0.944;QD=4.56;ReadPosRankSum=0.375;VQSLOD=1.0341;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:66,0:58:98.68:0,99,1952	0/1:6,0:6:18.10:26,0,18	0/0:88,8:21:35.96:0,36,485	0/0:91,10:34:41.91:0,42,1310	0/1:45,34:75:99:652,0,869	0/1:33,2:32:23.72:24,0,679	0/1:57,5:54:68.83:69,0,1356	0/0:76,2:53:78.17:0,78,2212	0/1:69,16:80:99:691,0,2095	0/1:7,0:7:29.27:29,0,63	0/0:2,0:2:3:0,3,25	0/0:84,0:84:99:0,130,3438	0/0:63,0:63:99:0,114,2334	0/0:75,0:72:99:0,109,2905	0/1:19,0:19:56.54:57,0,70	0/1:20,0:20:57.03:57,0,166	0/1:21,0:21:33.09:107,0,33	0/1:16,0:16:50.91:51,0,88	0/0:46,0:34:15.18:0,15,1308	0/0:64,0:60:99:0,122,2307	0/0:102,0:90:12.10:0,12,2001	0/0:69,0:66:99:0,133,2506	0/0:51,0:48:40.08:0,40,1444	0/0:67,0:67:0.58:0,1,1398	0/1:64,36:96:99:475,0,2485	1/1:11,0:8:4.77:23,5,0	0/1:11,0:11:36.01:46,0,36	0/1:3,0:3:14.97:15,0,17
chr10	10139058	.	ATGG	A	2722.19	PASS	AB=0.929;AC=27;AF=0.500;AN=54;BaseQRankSum=-2.645;DP=1331;FS=3.660;HRun=0;HaplotypeScore=404.7280;InbreedingCoeff=-0.0642;MQ=41.45;MQ0=69;MQRankSum=0.509;QD=3.36;ReadPosRankSum=-4.763;VQSLOD=0.2671;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:58,2:51:54.56:0,55,1588	1/1:2,2:4:8.93:87,9,0	0/0:84,0:17:32.13:0,32,385	0/0:89,0:30:38.77:0,39,1189	0/1:72,1:69:99:344,0,725	0/1:30,2:29:36.94:37,0,587	0/1:59,0:51:99:144,0,1105	0/0:77,0:52:54.82:0,55,1864	0/1:78,0:74:99:547,0,1878	1/1:4,2:6:8.76:95,9,0	./.	0/0:82,2:84:4.06:0,4,2840	0/1:58,4:62:48.83:49,0,1909	0/1:76,0:73:33.16:33,0,2459	1/1:12,4:16:9.03:130,9,0	0/1:10,6:16:16.97:207,0,17	1/1:11,7:18:17.92:248,18,0	0/1:4,9:13:82.30:82,0,94	0/1:42,1:32:99:121,0,1163	0/0:55,3:55:62.33:0,62,2009	0/1:91,3:85:99:126,0,1599	0/0:65,2:64:79.47:0,79,2187	0/1:42,1:43:48.38:48,0,1277	0/1:63,1:64:99:192,0,1162	0/1:94,1:92:99:202,0,2215	1/1:1,7:5:6:64,6,0	1/1:2,6:8:6.02:94,6,0	1/1:2,0:2:3.01:45,3,0
chr10	10139067	.	ATGG	A	90.66	PASS	AB=0.983;AC=15;AF=0.278;AN=54;BaseQRankSum=4.719;DP=1124;FS=6.166;HRun=0;HaplotypeScore=365.2980;InbreedingCoeff=0.3326;MQ=39.68;MQ0=62;MQRankSum=-2.193;QD=0.46;ReadPosRankSum=-3.113;VQSLOD=0.6234;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:41:89.96:0,90,1640	0/1:3,0:3:7.55:8,0,14	0/1:73,0:16:23.79:24,0,218	0/0:80,0:26:16.42:0,16,824	0/0:67,0:65:97.65:0,98,1363	0/1:25,1:23:5.62:6,0,671	0/1:42,4:39:94.09:94,0,1084	0/0:65,0:46:99:0,123,2369	0/0:70,1:67:99:0,103,2344	1/1:3,0:2:2.29:10,2,0	./.	0/0:76,0:76:99:0,178,3443	0/0:55,0:55:99:0,120,2460	0/0:65,0:63:99:0,124,2854	1/1:7,0:7:5.19:25,5,0	0/1:10,0:10:5.06:5,0,63	0/1:13,0:13:1.89:19,0,2	0/0:12,0:12:1.47:0,1,145	0/0:40,0:29:63.91:0,64,1246	0/0:51,0:48:99:0,111,2019	0/0:72,0:67:74.31:0,74,1452	0/0:57,0:55:99:0,117,2214	0/0:35,0:35:70.34:0,70,1399	0/0:53,0:53:55.23:0,55,1315	0/0:80,1:78:95.80:0,96,2507	1/1:8,0:5:2.49:21,2,0	1/1:5,0:5:5.39:23,5,0	0/1:1,0:1:0:0,0,0
chr10	10139076	.	AAGG	A	431.59	PASS	AB=0.735;AC=13;AF=0.250;AN=52;BaseQRankSum=3.611;DP=954;FS=4.854;HRun=0;HaplotypeScore=330.6880;InbreedingCoeff=0.4920;MQ=39.03;MQ0=51;MQRankSum=-3.790;QD=6.08;ReadPosRankSum=-4.869;VQSLOD=1.3518;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:33:66.13:0,66,1102	0/0:2,0:2:6.02:0,6,104	0/0:59,0:14:11.04:0,11,328	0/0:72,1:26:3.93:0,4,791	0/0:62,0:60:99:0,104,1840	0/0:22,0:21:17.46:0,17,370	0/1:39,3:37:99:100,0,735	0/0:52,0:39:99:0,108,2164	0/0:60,0:56:99:0,106,1562	1/1:1,2:2:6.01:67,6,0	./.	0/0:64,0:64:99:0,156,2103	0/0:47,0:47:85.74:0,86,1433	0/0:58,0:56:99:0,141,1897	1/1:0,4:4:6.02:72,6,0	0/1:1,3:4:29.79:30,0,36	1/1:1,5:6:8.66:123,9,0	0/1:4,3:7:91.40:119,0,91	0/0:38,0:27:75.06:0,75,911	0/0:42,0:39:87.41:0,87,1283	0/0:55,1:52:55.57:0,56,983	0/0:54,0:52:96.52:0,97,1577	0/0:29,0:29:69.72:0,70,833	0/0:42,1:43:13.75:0,14,866	0/0:80,1:78:91.39:0,91,2027	1/1:0,4:2:3.01:38,3,0	1/1:0,1:1:3.01:35,3,0	./.
chr10	10139087	.	GATC	G	6093.80	PASS	AB=0.950;AC=25;AF=0.500;AN=50;BaseQRankSum=6.469;DP=766;FS=31.685;HRun=0;HaplotypeScore=272.8313;InbreedingCoeff=-0.3644;MQ=40.52;MQ0=33;MQRankSum=-5.309;QD=9.12;ReadPosRankSum=5.276;VQSLOD=2.6185;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:18:81.15:81,0,101	0/0:3,0:3:3.01:0,3,46	0/0:38,1:12:29.88:0,30,411	0/0:50,3:17:29.28:0,29,565	0/1:49,2:48:17.35:17,0,1416	0/1:6,12:17:3.93:154,0,4	0/1:36,0:30:19.64:400,0,20	0/1:36,1:24:59.46:59,0,355	0/1:38,13:48:91.17:698,0,91	0/0:2,0:1:0:0,0,0	./.	0/1:54,1:55:99:895,0,183	0/1:39,0:39:51.01:670,0,51	0/1:47,1:46:99:607,0,142	0/1:3,0:3:0:0,0,0	1/1:2,0:2:2.84:15,3,0	1/1:6,0:6:11.95:114,12,0	0/1:5,0:5:20.46:20,0,129	1/1:36,0:23:54.72:512,55,0	0/1:35,0:32:80.47:377,0,80	0/1:42,1:40:99:101,0,124	0/1:51,0:49:99:359,0,121	0/1:21,1:22:1.87:263,0,2	0/1:31,0:31:51.94:52,0,100	0/1:67,6:70:99:676,0,998	1/1:4,0:2:2.98:21,3,0	./.	./.
chr10	10139088	.	ATCG	A	10181.58	PASS	AB=0.840;AC=31;AF=0.674;AN=46;BaseQRankSum=3.203;DP=730;FS=15.413;HRun=0;HaplotypeScore=255.5012;InbreedingCoeff=0.1561;MQ=40.77;MQ0=31;MQRankSum=-6.147;QD=16.03;ReadPosRankSum=2.346;VQSLOD=3.0589;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:15,6:17:12.38:208,0,12	0/0:3,0:3:3.01:0,3,48	0/0:36,0:11:27.08:0,27,454	0/0:47,3:15:27.52:0,28,554	0/1:46,3:46:10.16:10,0,1342	1/1:16,2:17:16.68:197,17,0	1/1:16,19:29:26.34:573,26,0	0/1:25,8:22:99:246,0,116	0/1:35,10:42:13.71:757,0,14	./.	./.	1/1:28,27:55:8.79:1606,9,0	1/1:18,21:39:40.54:1257,41,0	0/1:31,16:45:18.77:1118,0,19	./.	1/1:1,0:1:3.01:33,3,0	1/1:4,0:4:8:54,8,0	0/0:3,0:3:1.31:0,1,112	1/1:10,26:23:60.61:944,61,0	1/1:15,19:31:55.84:781,56,0	0/1:37,4:39:14.06:225,0,14	1/1:28,21:47:7.08:776,7,0	1/1:8,13:21:39.04:528,39,0	1/1:27,4:31:8.23:221,8,0	0/1:62,10:69:99:643,0,961	1/1:4,0:2:1.55:4,2,0	./.	./.
chr10	10139097	.	ATGG	A	2312.18	PASS	AB=0.853;AC=16;AF=0.308;AN=52;BaseQRankSum=-1.207;DP=648;FS=22.286;HRun=0;HaplotypeScore=257.5299;InbreedingCoeff=-0.0885;MQ=40.53;MQ0=27;MQRankSum=-3.166;QD=5.90;ReadPosRankSum=-1.767;VQSLOD=1.3503;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:14,1:11:4.49:0,4,26	0/0:3,0:3:6.02:0,6,100	0/0:33,0:12:32.98:0,33,641	0/0:52,0:18:43.53:0,44,849	0/0:48,0:46:69.96:0,70,1424	0/0:15,0:15:10.39:0,10,103	0/1:21,15:30:99:425,0,133	0/1:22,1:15:69.46:69,0,121	0/1:33,7:37:99:325,0,187	./.	1/1:1,0:1:0.47:1,0,0	0/1:39,8:47:70.14:341,0,70	1/1:27,10:37:7.58:340,8,0	0/1:26,9:34:73.29:391,0,73	0/0:4,0:3:2.60:0,3,10	0/0:1,0:1:2.96:0,3,19	0/0:6,0:6:8.81:0,9,134	0/0:3,0:3:3.01:0,3,68	0/1:32,2:22:61.37:61,0,255	0/1:22,7:26:48.41:162,0,48	0/1:31,3:31:3.12:80,0,3	0/1:31,5:35:99:113,0,135	1/1:16,1:17:3.18:20,3,0	0/1:18,5:23:27.98:124,0,28	0/0:69,1:68:72.78:0,73,1733	0/0:4,0:1:0.47:0,0,1	0/0:1,0:1:3.01:0,3,49	./.
chr10	10139100	.	G	GTGA	730.53	PASS	AB=0.929;AC=10;AF=0.192;AN=52;BaseQRankSum=1.364;DP=620;FS=31.265;HRun=0;HaplotypeScore=263.4029;InbreedingCoeff=-0.2102;MQ=40.15;MQ0=24;MQRankSum=-4.489;QD=2.33;ReadPosRankSum=-1.230;VQSLOD=1.2338;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:13,1:10:48:48,0,85	0/0:3,0:3:5.97:0,6,50	0/0:32,0:12:33.04:0,33,454	0/0:51,0:22:37.67:0,38,650	0/0:42,0:41:64.39:0,64,916	0/0:14,0:14:12.04:0,12,188	0/1:33,0:27:99:260,0,144	0/1:22,0:13:8.95:9,0,161	0/1:39,1:37:99:253,0,208	./.	0/0:1,0:1:0:0,0,0	0/1:41,2:43:98.39:98,0,879	0/0:33,0:33:35.49:0,35,807	0/1:32,2:33:73.40:73,0,567	0/0:6,0:5:5.54:0,6,27	0/1:1,1:2:26.17:52,0,26	0/0:6,0:6:2.63:0,3,48	0/0:2,0:2:3.01:0,3,46	0/0:32,0:21:47.32:0,47,626	0/0:29,0:26:28.99:0,29,324	0/0:28,1:26:10.48:0,10,82	0/1:32,2:33:24.13:24,0,424	0/0:19,0:19:7.57:0,8,85	0/1:20,2:22:1.95:2,0,77	0/1:66,2:66:39.75:40,0,1375	0/0:4,0:2:0.47:0,0,1	0/0:1,0:1:2.99:0,3,23	./.
chr10	10139104	.	TGAA	T	167.68	PASS	AB=0.976;AC=15;AF=0.288;AN=52;BaseQRankSum=5.315;DP=614;FS=0.000;HRun=0;HaplotypeScore=262.9037;InbreedingCoeff=-0.1438;MQ=40.39;MQ0=19;MQRankSum=-3.110;QD=0.61;ReadPosRankSum=-2.401;VQSLOD=1.6080;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:15,0:11:35.74:36,0,83	0/0:2,0:2:6.02:0,6,71	0/0:31,0:12:7.40:0,7,513	0/0:51,0:24:8.93:0,9,1096	0/0:44,0:42:80.19:0,80,1609	0/0:14,0:14:17.98:0,18,271	0/1:34,1:30:64.50:65,0,364	0/0:13,0:6:12.51:0,13,239	0/1:41,0:37:3:3,0,416	./.	1/1:1,0:1:0.47:1,0,0	0/1:43,0:43:28.10:28,0,803	0/1:37,0:37:10.24:10,0,635	0/1:35,0:35:8.97:9,0,518	0/1:6,0:5:10.24:20,0,10	0/1:3,0:3:11.64:12,0,12	0/1:6,0:6:2.94:3,0,83	0/0:2,0:2:3.01:0,3,38	0/0:28,0:20:22.89:0,23,665	0/0:29,0:26:20.46:0,20,425	0/1:29,1:27:24.67:25,0,33	0/0:34,0:33:36.74:0,37,632	0/0:20,0:20:31.93:0,32,230	0/1:15,5:20:17.19:75,0,17	0/0:68,1:67:74.24:0,74,2255	1/1:4,0:2:2.92:18,3,0	0/0:1,0:1:3.01:0,3,44	./.
chr10	10139109	.	GTGA	G	454.91	PASS	AB=0.922;AC=17;AF=0.327;AN=52;BaseQRankSum=3.336;DP=617;FS=14.859;HRun=0;HaplotypeScore=250.0390;InbreedingCoeff=-0.2497;MQ=40.92;MQ0=15;MQRankSum=-2.344;QD=2.01;ReadPosRankSum=-7.991;VQSLOD=-0.5131;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:16,0:12:27.11:57,0,27	1/1:2,0:2:2.74:12,3,0	0/0:34,0:15:8.48:0,8,500	0/0:51,0:25:36.11:0,36,999	0/0:41,0:39:72.88:0,73,1506	0/0:12,0:12:18.06:0,18,300	0/0:36,0:31:49.72:0,50,1006	0/0:7,0:2:6.02:0,6,97	0/0:38,0:35:61.08:0,61,1137	0/1:2,0:2:9.89:39,0,10	1/1:0,1:1:2.04:6,2,0	0/1:45,0:45:99:104,0,487	0/0:40,0:40:2.05:0,2,546	0/1:37,0:36:30.93:31,0,307	0/1:5,2:6:8.45:72,0,8	0/1:2,1:3:15.76:16,0,44	0/1:3,1:4:40.10:40,0,48	./.	0/0:27,0:18:17.81:0,18,211	0/1:31,0:29:20.75:63,0,21	0/1:29,3:28:33.55:34,0,62	0/0:36,0:35:3.78:0,4,167	0/1:18,0:18:10.24:10,0,35	0/1:22,0:22:39.59:40,0,43	0/0:66,1:65:40.99:0,41,1530	0/1:2,1:2:32.55:33,0,42	0/1:3,0:3:40.14:46,0,40	./.
chr10	10139112	.	A	ATGG	1875.63	PASS	AB=0.905;AC=16;AF=0.296;AN=54;BaseQRankSum=0.758;DP=626;FS=8.230;HRun=0;HaplotypeScore=247.5415;InbreedingCoeff=-0.3209;MQ=41.48;MQ0=13;MQRankSum=-4.686;QD=5.20;ReadPosRankSum=-6.734;VQSLOD=-0.1581;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:10,8:14:26.85:122,0,27	0/0:2,0:2:2.22:0,2,7	0/0:35,0:15:38.35:0,38,549	0/0:50,0:25:44.06:0,44,805	0/0:41,0:38:47.71:0,48,1202	0/0:13,0:13:20.90:0,21,215	0/0:39,0:34:45.62:0,46,991	0/0:7,0:2:6.02:0,6,92	0/1:40,2:39:23.48:23,0,833	0/1:3,0:3:2.32:2,0,27	0/0:1,0:1:2.98:0,3,22	0/1:43,4:47:99:387,0,532	0/1:32,9:41:99:358,0,425	0/1:25,10:34:99:464,0,387	0/1:9,0:8:33.13:33,0,35	0/1:3,0:3:16.33:16,0,17	0/0:4,0:4:9.34:0,9,64	0/0:1,0:1:2.94:0,3,18	0/1:21,2:13:99:108,0,205	0/1:31,2:31:99:125,0,197	0/1:26,6:28:3.18:3,0,58	0/1:28,3:30:99:167,0,297	0/1:15,2:17:31.45:127,0,31	1/1:18,3:21:0.05:76,0,0	0/0:68,0:66:88.83:0,89,1669	0/0:3,0:2:1.27:0,1,24	0/1:5,0:5:1.93:2,0,22	./.
chr10	10139118	.	A	ATGG	1636.11	PASS	AB=0.994;AC=22;AF=0.407;AN=54;BaseQRankSum=8.213;DP=628;FS=2.025;HRun=0;HaplotypeScore=243.0077;InbreedingCoeff=-0.4566;MQ=42.66;MQ0=9;MQRankSum=-7.696;QD=3.63;ReadPosRankSum=1.975;VQSLOD=2.7224;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:17:9.94:78,10,0	0/1:2,0:2:14.98:15,0,20	0/0:32,0:16:35.53:0,36,381	0/0:51,0:30:59.52:0,60,693	0/0:40,1:38:44.81:0,45,1050	0/1:13,0:13:36.91:37,0,147	0/0:39,0:35:68:0,68,970	0/0:9,0:4:5.95:0,6,42	0/1:42,1:40:84.04:84,0,723	0/0:3,0:3:3.37:0,3,10	0/0:2,0:2:1.82:0,2,5	0/1:44,1:45:99:282,0,161	0/1:38,0:38:99:314,0,132	0/1:35,0:34:78.78:294,0,79	0/1:13,0:12:27.29:27,0,30	0/1:2,0:2:13.50:13,0,19	0/1:4,0:4:19.77:20,0,59	1/1:3,0:3:1.20:16,1,0	0/1:18,0:9:50.53:57,0,51	0/1:32,0:30:86.38:86,0,139	0/1:35,1:31:36.63:97,0,37	0/1:31,0:30:70.01:99,0,70	0/1:19,0:19:21.13:106,0,21	0/1:21,0:21:41.77:42,0,48	0/1:63,2:63:94.34:94,0,1003	0/1:3,0:2:18.85:19,0,27	0/1:7,0:7:11.52:12,0,30	./.
chr10	10139125	.	TGATGAA	T	3951.03	PASS	AB=0.948;AC=27;AF=0.482;AN=56;BaseQRankSum=6.663;DP=659;FS=3.161;HRun=0;HaplotypeScore=250.1103;InbreedingCoeff=-0.3106;MQ=42.02;MQ0=12;MQRankSum=-5.190;QD=7.82;ReadPosRankSum=-0.948;VQSLOD=2.3996;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:19:26.87:27,0,195	0/1:2,0:2:15.84:43,0,16	0/0:30,0:16:6.79:0,7,696	0/0:49,0:30:59.92:0,60,1191	0/0:39,0:36:71.95:0,72,2301	0/0:10,0:10:15.05:0,15,429	0/1:51,0:47:99:238,0,1881	0/0:8,0:5:12.04:0,12,252	0/1:50,0:48:99:144,0,2268	1/1:3,1:4:12.04:239,12,0	1/1:1,1:2:6.02:103,6,0	0/1:39,0:39:99:262,0,703	0/1:37,1:38:99:263,0,593	0/1:37,0:36:99:129,0,665	1/1:14,4:17:8.58:831,9,0	0/1:6,1:7:93.38:234,0,93	0/1:5,1:6:43.09:130,0,43	1/1:4,0:4:1.14:174,1,0	0/1:21,0:13:99:99,0,303	0/1:33,0:33:99:106,0,822	0/1:39,5:37:99:155,0,415	0/1:29,0:29:99:150,0,409	0/0:18,0:17:8.44:0,8,290	0/1:24,0:24:9.81:10,0,308	0/1:59,1:59:55.19:55,0,2838	0/1:3,1:2:45.16:60,0,45	0/1:5,3:8:43.46:361,0,43	1/1:2,0:2:6.02:137,6,0
chr10	10139128	.	TGAA	T	3155.04	PASS	AB=0.911;AC=28;AF=0.500;AN=56;BaseQRankSum=7.650;DP=672;FS=13.436;HRun=0;HaplotypeScore=224.0089;InbreedingCoeff=-0.3737;MQ=42.28;MQ0=16;MQRankSum=-2.774;QD=5.68;ReadPosRankSum=-1.583;VQSLOD=1.2331;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:21:5.87:0,6,270	1/1:2,0:2:0.91:21,1,0	0/0:28,0:13:19.38:0,19,602	0/0:43,1:28:53.43:0,53,962	0/1:31,5:33:24.04:24,0,1428	0/0:9,0:9:15.05:0,15,321	0/1:52,0:48:0.33:0,0,1490	0/0:10,1:7:18.04:0,18,291	0/1:53,0:51:7.24:7,0,1696	0/1:4,0:4:13.70:60,0,14	1/1:3,0:3:4.01:47,4,0	0/1:29,7:36:99:307,0,641	0/1:35,3:38:73.94:74,0,813	0/1:30,6:35:99:253,0,760	1/1:19,0:18:2:249,2,0	0/1:9,0:9:64.21:83,0,64	0/1:8,0:8:43.97:54,0,44	1/1:4,0:4:0.28:41,0,0	0/1:21,1:15:19.50:20,0,440	0/1:27,8:34:99:385,0,753	0/1:51,1:45:5.72:6,0,481	0/1:17,10:27:99:449,0,439	0/1:12,6:16:99:166,0,297	0/1:23,2:25:11.30:11,0,334	0/1:39,20:58:99:835,0,1847	0/1:7,0:5:24.80:77,0,25	0/1:8,0:8:40.53:91,0,41	1/1:2,0:2:5.99:49,6,0
chr10	10139133	.	G	GTGA	401.76	PASS	AB=0.893;AC=8;AF=0.143;AN=56;BaseQRankSum=5.574;DP=778;FS=11.081;HRun=0;HaplotypeScore=258.0692;InbreedingCoeff=-0.1761;MQ=41.54;MQ0=25;MQRankSum=-2.782;QD=3.35;ReadPosRankSum=1.958;VQSLOD=1.0659;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:28,2:27:89.40:89,0,362	0/1:2,1:3:35.42:58,0,35	0/0:46,0:13:24.08:0,24,366	0/0:54,0:29:46.50:0,46,679	0/0:34,0:31:66.94:0,67,935	0/0:11,0:11:19.25:0,19,232	0/0:54,0:50:93.87:0,94,1194	0/0:18,0:12:30.07:0,30,397	0/0:53,0:52:99:0,120,1645	0/0:5,0:4:11.98:0,12,121	0/0:4,0:4:8.99:0,9,88	0/0:41,0:41:83.45:0,83,1046	0/0:41,0:41:81.50:0,82,1114	0/0:39,0:38:69:0,69,1044	0/1:23,3:25:70.75:71,0,334	0/1:13,1:14:30.60:31,0,270	0/1:12,2:14:93.47:120,0,93	0/1:10,1:11:77.96:78,0,90	0/0:22,0:16:36.10:0,36,516	0/0:35,0:34:62.14:0,62,907	0/0:58,0:50:64.72:0,65,726	0/0:29,0:28:60.02:0,60,735	0/0:19,0:17:30.82:0,31,404	0/0:31,3:34:37.81:0,38,411	0/0:59,0:58:99:0,113,1799	0/1:10,1:8:48.49:48,0,124	0/1:10,1:11:42.23:42,0,114	0/0:2,0:2:5.98:0,6,47
chr10	10139202	.	AAGG	A	3500.77	PASS	AB=0.875;AC=18;AF=0.321;AN=56;BaseQRankSum=11.230;DP=1413;FS=1.894;HRun=0;HaplotypeScore=454.8806;InbreedingCoeff=-0.4637;MQ=42.63;MQ0=15;MQRankSum=-12.755;QD=3.96;ReadPosRankSum=5.111;VQSLOD=0.3692;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:56,3:53:62.31:62,0,1791	0/1:13,6:19:99:289,0,688	0/0:39,0:8:18.02:0,18,344	0/0:44,1:18:48.34:0,48,725	0/0:33,0:29:47.91:0,48,1102	0/1:26,3:32:99:109,0,1025	0/0:87,2:84:55.06:0,55,3211	0/0:49,2:39:28.72:0,29,2012	0/1:81,2:91:3.31:3,0,3563	0/1:44,8:50:99:332,0,2274	0/1:24,8:31:99:337,0,1104	0/0:60,1:61:99:0,105,3189	0/1:64,6:70:99:149,0,3219	0/1:43,7:49:99:261,0,1944	0/1:56,9:63:99:343,0,2950	0/1:62,9:71:99:357,0,3509	0/1:36,4:40:99:131,0,1861	0/1:32,3:35:69.59:70,0,1813	0/0:32,1:26:17.96:0,18,1270	0/0:25,1:26:8.41:0,8,1121	0/0:128,3:120:84.30:0,84,3359	0/1:35,15:50:99:611,0,1793	0/1:22,3:24:57.17:57,0,900	0/1:56,4:60:96.43:96,0,1610	0/1:26,3:28:9.61:10,0,1087	0/1:44,7:48:99:249,0,2267	0/1:41,3:44:34.04:34,0,2478	0/0:17,0:17:45.11:0,45,937
chr10	10139249	.	G	GGCA	608.54	PASS	AB=0.929;AC=11;AF=0.196;AN=56;BaseQRankSum=8.387;DP=1141;FS=1.180;HRun=0;HaplotypeScore=388.9990;InbreedingCoeff=-0.2340;MQ=38.29;MQ0=48;MQRankSum=-5.339;QD=2.25;ReadPosRankSum=-0.876;VQSLOD=1.0541;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:42:45.43:0,45,1007	0/1:6,3:8:99:177,0,261	0/0:80,0:18:51.17:0,51,951	0/0:80,0:19:50.54:0,51,875	0/0:49,0:46:62.06:0,62,1071	0/1:30,1:26:6.19:6,0,702	0/0:75,0:69:99:0,107,1826	0/0:65,0:46:99:0,120,2119	0/0:67,1:65:51.38:0,51,2027	0/1:25,1:24:14.19:14,0,1025	0/1:9,1:9:28.63:29,0,362	0/0:51,0:50:99:0,117,1788	0/1:45,2:47:99:128,0,958	0/0:45,0:44:43.53:0,44,1043	0/1:21,2:22:89.87:90,0,834	0/1:27,2:29:99:123,0,1174	0/1:17,2:19:99:119,0,427	0/1:18,1:18:25.83:26,0,701	0/0:24,0:11:21.07:0,21,394	0/0:38,0:37:59.59:0,60,844	0/0:99,0:82:50.13:0,50,1645	0/0:52,1:52:7.89:0,8,1106	0/0:25,0:22:26.85:0,27,543	0/1:42,2:44:36.18:36,0,726	0/0:46,0:43:99:0,107,1735	0/1:14,0:14:3.64:4,0,609	0/0:17,0:17:51.14:0,51,866	0/0:9,0:9:21.07:0,21,391
chr10	10139262	.	ATGG	A	4690.69	PASS	AB=0.919;AC=33;AF=0.589;AN=56;BaseQRankSum=-3.984;DP=1068;FS=95.685;HRun=0;HaplotypeScore=328.3369;InbreedingCoeff=-0.1344;MQ=35.15;MQ0=70;MQRankSum=1.491;QD=6.09;ReadPosRankSum=0.088;VQSLOD=0.3644;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:41,8:43:99:198,0,867	1/1:3,1:3:6.02:94,6,0	0/0:102,0:16:28.04:0,28,461	0/0:88,0:13:28.96:0,29,437	0/0:53,0:50:60.75:0,61,1124	0/1:28,2:27:97.61:98,0,746	0/1:63,2:58:99:125,0,794	0/1:57,2:40:99:291,0,885	0/1:42,12:51:99:500,0,1560	1/1:11,3:14:21.90:278,22,0	1/1:3,0:3:9.01:93,9,0	0/1:46,2:48:99:195,0,1234	0/1:40,1:41:88.92:89,0,1334	0/1:41,1:41:84.74:85,0,1202	1/1:10,4:14:33.06:447,33,0	1/1:8,3:11:23.44:260,23,0	1/1:7,4:11:20.68:203,21,0	0/1:8,3:11:27.52:132,0,28	0/1:25,2:13:99:115,0,202	0/1:41,4:43:99:99,0,1448	0/1:77,16:75:99:609,0,507	0/1:51,0:49:16.92:17,0,1360	0/1:33,3:30:71.10:71,0,793	0/1:33,4:37:99:172,0,241	0/0:53,0:50:99:0,139,2625	1/1:6,0:7:13.49:109,13,0	1/1:7,4:11:24.04:335,24,0	1/1:7,0:7:8.95:75,9,0
chr10	10139265	.	G	GTGA	7120.44	PASS	AB=0.968;AC=34;AF=0.607;AN=56;BaseQRankSum=-7.250;DP=1053;FS=106.638;HRun=0;HaplotypeScore=322.6369;InbreedingCoeff=-0.0989;MQ=34.94;MQ0=73;MQRankSum=2.421;QD=9.52;ReadPosRankSum=-2.695;VQSLOD=1.5931;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:47,1:42:99:349,0,687	1/1:4,0:3:6.02:110,6,0	0/0:104,0:15:29.77:0,30,398	0/0:88,0:13:29.29:0,29,376	0/0:55,0:52:63.75:0,64,920	0/1:28,1:26:99:140,0,659	0/1:59,3:56:99:430,0,694	0/1:55,4:40:99:462,0,642	0/1:54,0:51:99:691,0,1134	1/1:9,1:10:21.06:354,21,0	1/1:1,2:3:9.02:127,9,0	0/1:40,3:44:99:411,0,924	0/1:37,1:38:99:136,0,1036	0/1:40,2:41:99:133,0,924	1/1:11,3:14:33.10:613,33,0	1/1:7,3:10:24.07:455,24,0	1/1:12,0:12:18.79:320,19,0	1/1:9,1:9:2.10:334,2,0	0/1:25,0:11:99:137,0,154	0/1:43,1:42:99:163,0,1153	0/1:89,4:75:99:536,0,453	0/1:49,2:49:33.37:33,0,1048	0/1:37,0:31:99:111,0,614	0/1:36,1:37:99:231,0,212	0/0:53,0:50:99:0,141,2068	1/1:3,3:6:15.05:310,15,0	1/1:7,2:10:24.04:426,24,0	1/1:4,1:5:8.95:111,9,0
chr10	10139271	.	ATGG	A	307.12	PASS	AB=0.991;AC=16;AF=0.286;AN=56;BaseQRankSum=8.351;DP=1016;FS=24.867;HRun=0;HaplotypeScore=337.2872;InbreedingCoeff=-0.0247;MQ=33.43;MQ0=81;MQRankSum=-7.601;QD=0.82;ReadPosRankSum=-1.202;VQSLOD=0.7877;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:40:32.24:0,32,1227	1/1:3,0:2:0.56:9,1,0	0/1:111,0:10:5.80:6,0,235	0/0:96,0:11:23.74:0,24,379	0/0:50,0:47:60.76:0,61,1217	0/1:25,2:25:32.68:33,0,830	0/0:60,1:55:29.23:0,29,1178	0/0:60,0:41:55.33:0,55,1691	0/1:49,1:47:22.47:22,0,1754	0/1:6,0:6:28.45:47,0,28	1/1:2,0:2:0.17:1,0,0	0/0:43,0:43:65:0,65,1628	0/0:37,0:37:81.22:0,81,1673	0/0:42,0:41:68.68:0,69,1531	0/1:11,0:11:21.14:58,0,21	0/1:7,0:7:43.98:44,0,50	0/1:11,0:11:33.41:51,0,33	0/0:10,0:9:1.30:0,1,88	0/1:25,0:11:31.87:32,0,352	0/0:42,0:40:53.04:0,53,1865	0/1:81,0:64:68.26:68,0,667	0/0:50,0:48:99:0,99,2038	0/0:36,2:32:38.91:0,39,1148	0/1:34,0:34:20.17:20,0,315	0/0:57,0:54:99:0,147,3029	0/0:5,0:5:11.65:0,12,73	1/1:8,0:8:13.59:69,14,0	0/0:3,0:3:2.04:0,2,6
chr10	10139274	.	G	GTGA	2515.41	PASS	AB=0.993;AC=30;AF=0.536;AN=56;BaseQRankSum=3.887;DP=997;FS=59.614;HRun=0;HaplotypeScore=330.6908;InbreedingCoeff=0.0465;MQ=33.74;MQ0=81;MQRankSum=-2.926;QD=4.71;ReadPosRankSum=-4.313;VQSLOD=0.2946;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:46,0:41:99:120,0,894	1/1:3,0:2:3.01:48,3,0	0/0:111,0:10:9.95:0,10,96	0/0:100,0:14:9.71:0,10,183	0/0:50,0:47:49.60:0,50,708	0/1:26,0:24:32.55:33,0,614	0/1:57,0:52:36.05:36,0,697	0/0:58,1:40:33.40:0,33,1288	0/1:46,0:43:99:460,0,1167	1/1:6,0:6:8.99:128,9,0	1/1:1,1:2:2.62:24,3,0	0/1:41,1:42:99:123,0,1080	0/0:37,0:37:18.11:0,18,1169	0/1:39,0:39:22.45:22,0,1065	1/1:8,1:10:15.52:271,16,0	1/1:6,1:7:12.51:217,13,0	1/1:11,0:11:17.76:244,18,0	0/1:9,0:8:5.27:82,0,5	0/1:25,0:11:99:130,0,254	0/1:41,1:40:74.41:74,0,1309	0/1:75,1:59:99:124,0,380	0/0:49,0:47:65.96:0,66,1374	0/1:38,0:32:51.27:51,0,852	0/1:33,0:33:99:135,0,246	0/0:57,0:54:99:0,130,2013	1/1:3,1:4:5.14:69,5,0	1/1:5,2:7:15.01:246,15,0	1/1:4,0:4:6:59,6,0
chr10	10139280	.	AAGG	A	1324.84	PASS	AB=0.970;AC=28;AF=0.500;AN=56;BaseQRankSum=6.387;DP=957;FS=22.337;HRun=0;HaplotypeScore=328.2819;InbreedingCoeff=0.0553;MQ=31.94;MQ0=79;MQRankSum=-3.103;QD=2.53;ReadPosRankSum=-3.954;VQSLOD=0.5676;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:40,1:38:48.33:48,0,993	1/1:1,0:1:3.01:32,3,0	0/1:107,0:7:1.70:2,0,174	0/0:99,0:12:20.40:0,20,396	0/0:47,2:45:53.86:0,54,1129	0/1:23,0:21:19.68:20,0,638	0/0:52,1:48:6:0,6,991	0/0:55,0:35:97.17:0,97,1759	0/1:46,0:43:99:179,0,1307	1/1:5,0:5:4.37:65,4,0	1/1:4,0:4:1.72:24,2,0	0/1:42,0:42:42.16:42,0,1140	0/0:38,0:38:18.15:0,18,736	0/1:41,0:40:22.91:23,0,599	1/1:6,0:6:10.58:146,11,0	1/1:5,0:5:10.38:102,10,0	1/1:7,2:9:18.40:180,18,0	0/1:4,2:5:9.44:82,0,9	0/1:25,0:13:99:104,0,335	0/1:45,0:43:5.52:6,0,1162	0/1:71,4:60:99:127,0,337	0/0:47,0:46:67.17:0,67,1647	0/0:38,0:32:8.12:0,8,935	0/1:30,1:31:99:158,0,128	0/0:52,0:50:89.34:0,89,2876	1/1:1,0:1:2.37:8,2,0	1/1:7,0:6:7.72:141,8,0	0/1:4,0:4:10.52:14,0,11
chr10	10139283	.	GTGA	G	2128.47	PASS	AB=0.973;AC=20;AF=0.357;AN=56;BaseQRankSum=6.584;DP=933;FS=50.500;HRun=0;HaplotypeScore=318.0352;InbreedingCoeff=-0.1579;MQ=31.61;MQ0=75;MQRankSum=-3.023;QD=4.38;ReadPosRankSum=0.081;VQSLOD=1.3176;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:40,0:37:96.77:97,0,398	0/0:1,0:1:1.55:0,2,4	0/0:103,0:7:17.95:0,18,199	0/0:97,2:13:1.96:0,2,183	0/0:47,3:46:22.56:0,23,759	0/1:18,3:19:99:104,0,217	0/0:52,0:47:45.30:0,45,460	0/0:51,0:32:43.49:0,43,734	0/1:44,2:43:90.51:91,0,472	0/1:5,0:5:0.34:0,0,20	1/1:3,0:3:0.68:2,1,0	0/1:38,2:40:99:170,0,652	0/1:36,1:37:99:367,0,183	0/1:37,3:39:99:419,0,157	0/0:6,0:6:1.88:0,2,7	0/1:4,0:4:7.71:8,0,18	1/1:8,0:8:16.77:105,17,0	0/1:6,0:5:0.46:17,0,0	0/0:25,0:13:8.46:0,8,157	0/1:45,0:43:99:268,0,353	0/1:71,1:57:99:169,0,122	0/1:47,1:46:99:219,0,653	0/1:38,0:32:99:116,0,388	0/1:29,1:30:32.38:115,0,32	0/0:51,1:50:26.99:0,27,1861	0/0:1,0:1:0:0,0,0	0/0:7,0:6:0.29:0,0,3	1/1:3,0:3:2.91:8,3,0
chr10	10139289	.	ATGATGG	A	2115.60	PASS	AB=0.934;AC=24;AF=0.429;AN=56;BaseQRankSum=11.816;DP=933;FS=3.355;HRun=0;HaplotypeScore=357.7104;InbreedingCoeff=0.0855;MQ=32.96;MQ0=61;MQRankSum=-4.288;QD=4.93;ReadPosRankSum=-6.251;VQSLOD=0.4756;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:38,3:38:99:155,0,964	0/0:1,0:1:1.55:0,2,4	0/0:98,0:12:24.25:0,24,288	0/0:87,0:14:29.18:0,29,476	0/0:51,0:47:68.03:0,68,1308	0/0:22,0:20:24.03:0,24,665	0/0:54,0:49:70.29:0,70,1050	0/0:46,0:28:34.81:0,35,866	0/1:43,4:44:99:280,0,1049	1/1:5,2:7:7.38:150,7,0	1/1:1,2:3:4.56:36,5,0	0/1:39,2:41:47.77:48,0,996	0/1:33,4:37:99:104,0,740	0/1:34,3:36:49.33:49,0,668	0/1:6,1:7:2.60:78,0,3	0/1:7,0:7:12.41:21,0,12	1/1:5,2:8:18.05:311,18,0	0/1:6,0:5:0.34:40,0,0	0/1:22,1:13:81.42:81,0,209	0/1:42,4:45:99:109,0,1108	0/1:62,10:60:99:454,0,264	0/0:47,1:46:49.77:0,50,1266	0/0:39,0:33:43.73:0,44,1011	0/1:27,2:31:88.65:89,0,187	0/0:55,0:52:99:0,132,3385	1/1:4,0:4:8.75:59,9,0	1/1:5,2:7:0.08:74,0,0	1/1:0,3:3:9.03:151,9,0
chr10	10139292	.	ATGG	A	5169.02	PASS	AB=0.879;AC=32;AF=0.593;AN=54;BaseQRankSum=2.300;DP=934;FS=2.272;HRun=0;HaplotypeScore=326.0841;InbreedingCoeff=-0.4544;MQ=34.19;MQ0=60;MQRankSum=-1.266;QD=6.22;ReadPosRankSum=5.345;VQSLOD=2.8801;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:34,8:39:99:314,0,260	./.	0/0:97,1:14:13.79:0,14,242	0/1:86,4:16:43.22:43,0,263	0/1:51,0:47:12.02:12,0,662	0/1:20,2:20:88.72:179,0,89	0/1:52,4:51:87.08:87,0,260	0/1:42,0:26:20.89:21,0,489	0/1:39,7:44:99:360,0,177	1/1:7,0:7:8.16:49,8,0	1/1:3,0:3:0.04:1,0,0	0/1:31,11:42:99:330,0,400	0/1:22,15:37:39.34:698,0,39	0/1:21,17:37:53.92:685,0,54	0/1:7,0:7:2.57:5,0,3	1/1:6,1:7:2.34:35,2,0	1/1:6,2:8:18:168,18,0	0/0:4,0:3:2.29:0,2,6	0/1:20,1:13:30.55:31,0,81	0/1:31,15:45:99:657,0,152	0/1:68,8:60:32.54:243,0,33	0/1:38,10:46:99:510,0,346	0/1:32,7:34:99:365,0,282	0/1:24,7:31:14.06:211,0,14	0/1:58,0:55:56.88:57,0,1635	1/1:6,0:6:11.82:77,12,0	1/1:5,0:4:2.80:19,3,0	1/1:3,0:3:4.93:13,5,0
chr10	10139301	.	ATGG	A	6779.43	PASS	AB=0.829;AC=20;AF=0.357;AN=56;BaseQRankSum=-4.409;DP=898;FS=23.559;HRun=0;HaplotypeScore=330.2674;InbreedingCoeff=-0.5776;MQ=34.57;MQ0=55;MQRankSum=-1.108;QD=8.24;ReadPosRankSum=8.101;VQSLOD=2.4839;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:26,18:42:85.30:607,0,85	0/0:1,0:1:2.92:0,3,17	0/1:74,8:12:14.74:15,0,351	0/1:75,9:17:14.62:15,0,536	0/1:36,11:44:99:220,0,596	0/1:18,7:23:99:374,0,119	0/1:32,19:48:99:640,0,183	0/0:31,0:17:41.59:0,42,462	0/1:33,14:47:99:802,0,251	0/0:13,0:12:32.27:0,32,213	0/0:3,0:3:2.22:0,2,7	0/1:31,8:39:99:321,0,293	0/1:28,8:36:99:470,0,104	0/1:29,8:36:61.90:472,0,62	0/0:9,0:9:20.79:0,21,109	0/1:10,0:10:3.89:4,0,185	0/1:9,0:9:19.05:88,0,19	0/1:3,1:3:24.20:24,0,37	0/1:12,2:10:62.58:87,0,63	0/1:34,13:46:99:719,0,213	0/1:62,14:61:99:330,0,113	0/1:33,8:41:99:349,0,186	0/1:25,11:32:99:520,0,232	0/1:21,8:29:29.42:204,0,29	0/1:49,13:59:99:517,0,1910	0/0:9,0:9:23.44:0,23,163	0/0:6,0:5:4.63:0,5,76	0/0:3,0:3:8.56:0,9,43
chr10	10139304	.	G	GTGA	2607.06	PASS	AB=0.908;AC=16;AF=0.286;AN=56;BaseQRankSum=-1.297;DP=928;FS=14.618;HRun=0;HaplotypeScore=372.1305;InbreedingCoeff=-0.4296;MQ=34.60;MQ0=47;MQRankSum=-6.112;QD=4.08;ReadPosRankSum=-2.332;VQSLOD=0.7735;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:44,3:45:99:167,0,320	0/0:1,0:1:2.84:0,3,14	0/0:71,1:11:5.15:0,5,305	0/0:78,1:17:11.08:0,11,464	0/1:43,4:44:60.09:60,0,378	0/1:23,3:24:99:104,0,294	0/1:49,4:49:99:153,0,277	0/1:10,20:17:14.41:574,0,14	0/1:50,4:54:99:317,0,372	0/0:20,0:19:37.03:0,37,243	0/0:4,0:4:4.97:0,5,17	0/1:35,7:42:99:343,0,405	0/1:38,1:39:21.20:21,0,697	0/1:39,2:40:53.56:54,0,620	0/0:14,0:13:22.83:0,23,117	0/0:11,0:11:18.88:0,19,200	0/1:10,0:10:11.03:54,0,11	0/0:5,0:4:3.48:0,3,33	0/1:13,1:10:51.53:89,0,52	0/1:47,3:48:31.19:31,0,721	0/1:74,5:63:99:252,0,234	0/1:33,7:40:99:285,0,264	0/1:32,5:33:99:209,0,242	0/1:29,1:30:51.24:51,0,158	0/0:60,1:58:87.34:0,87,1527	0/0:11,0:10:24.12:0,24,204	0/0:7,0:6:16.71:0,17,95	0/0:4,0:4:10.78:0,11,47
chr10	10139310	.	AAGG	A	6772.18	PASS	AB=0.945;AC=35;AF=0.625;AN=56;BaseQRankSum=3.728;DP=878;FS=1.521;HRun=0;HaplotypeScore=338.7679;InbreedingCoeff=-0.1985;MQ=35.21;MQ0=36;MQRankSum=-8.682;QD=9.94;ReadPosRankSum=-10.342;VQSLOD=1.2216;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:41,4:43:99:411,0,145	1/1:1,0:1:3:25,3,0	0/0:67,0:11:33.11:0,33,676	0/0:67,0:20:34.28:0,34,978	0/1:42,0:40:13.09:13,0,707	0/1:23,2:23:99:228,0,191	0/1:39,3:39:99:536,0,166	0/1:26,1:15:87.87:88,0,88	0/1:47,6:53:53.99:696,0,54	1/1:12,10:21:60.02:670,60,0	1/1:4,0:4:6.02:90,6,0	0/1:37,2:39:99:431,0,243	0/1:35,3:38:99:251,0,510	0/1:37,3:39:99:331,0,409	1/1:6,12:17:27.02:302,27,0	1/1:13,1:14:32.68:416,33,0	1/1:10,0:10:12.81:120,13,0	0/1:4,0:3:16.77:17,0,18	1/1:10,0:8:0.16:105,0,0	0/1:42,5:45:99:191,0,617	0/1:73,4:61:99:650,0,417	0/1:34,2:35:99:367,0,168	0/1:32,2:31:23.29:23,0,287	0/1:28,0:28:99:130,0,200	0/0:62,0:59:97.27:0,97,2542	1/1:10,3:12:35.93:342,36,0	1/1:5,2:6:19.58:209,20,0	1/1:3,1:4:12.02:131,12,0
chr10	10139319	.	ATGG	A	2112.12	PASS	AB=0.978;AC=25;AF=0.446;AN=56;BaseQRankSum=11.267;DP=886;FS=10.252;HRun=0;HaplotypeScore=357.0110;InbreedingCoeff=-0.6089;MQ=38.64;MQ0=26;MQRankSum=-7.622;QD=3.08;ReadPosRankSum=1.460;VQSLOD=0.5054;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:44,0:43:99:173,0,451	0/1:2,0:2:2.96:3,0,20	0/0:59,0:20:46.66:0,47,662	0/1:65,0:30:7.65:8,0,875	0/0:42,0:40:49.94:0,50,871	0/1:23,0:22:83.73:84,0,354	0/1:47,0:43:99:244,0,499	0/1:22,0:11:4.30:4,0,99	0/1:47,2:49:99:261,0,422	1/1:24,0:23:17.09:231,17,0	0/1:5,0:5:34.44:44,0,34	0/1:38,0:38:53.77:54,0,387	0/1:38,0:38:53.93:54,0,525	0/1:43,0:42:99:109,0,540	0/1:20,0:19:13.54:114,0,14	0/1:20,0:20:51.15:126,0,51	0/1:8,2:10:19.07:71,0,19	0/1:5,1:6:20.41:20,0,35	0/1:8,0:7:26.13:26,0,94	0/1:44,0:42:45.35:45,0,729	0/1:78,2:66:99:343,0,517	0/1:32,0:31:50.32:50,0,242	0/0:36,0:32:38.94:0,39,536	0/1:29,1:30:18.02:18,0,324	0/0:64,0:62:99:0,129,2315	0/1:16,0:15:20.82:78,0,21	0/1:10,0:9:14.62:74,0,15	0/1:7,0:7:23.70:37,0,24
chr10	10139324	.	G	GAT	2249.54	PASS	AB=0.776;AC=22;AF=0.393;AN=56;BaseQRankSum=10.590;DP=900;FS=6.104;HRun=0;HaplotypeScore=349.5484;InbreedingCoeff=-0.6375;MQ=40.29;MQ0=23;MQRankSum=-7.146;QD=3.62;ReadPosRankSum=11.552;VQSLOD=0.0317;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:35,10:44:78.69:79,0,569	0/1:2,1:3:22.04:22,0,28	0/0:57,0:25:66.22:0,66,1025	0/0:59,0:31:83.70:0,84,1115	0/0:39,0:38:53.97:0,54,817	0/1:19,4:22:80.70:81,0,399	0/1:33,14:43:99:206,0,536	0/0:24,0:13:28.73:0,29,194	0/1:33,15:48:99:275,0,633	0/1:14,10:23:32.64:314,0,33	0/1:3,3:6:13.19:13,0,35	0/1:31,8:39:99:133,0,581	0/1:33,6:39:69.13:69,0,820	0/1:36,6:41:25.29:25,0,834	0/1:18,6:23:91.29:175,0,91	0/1:13,9:22:83.88:239,0,84	0/1:7,6:13:9.13:9,0,114	0/1:8,2:9:14.24:14,0,83	0/1:5,3:7:71.46:71,0,96	0/1:38,9:45:77.70:78,0,918	0/1:56,22:63:91.20:91,0,757	0/1:27,4:30:69.57:70,0,276	0/0:35,1:32:20.19:0,20,560	0/1:28,7:35:36.29:36,0,368	0/0:63,0:62:99:0,147,2283	0/1:11,10:20:93.58:256,0,94	0/1:6,4:9:28.44:98,0,28	0/1:4,3:7:54.73:55,0,58
chr10	10139325	.	G	GGTGA	7955.07	PASS	AB=0.811;AC=28;AF=0.500;AN=56;BaseQRankSum=2.433;DP=899;FS=5.558;HRun=0;HaplotypeScore=347.6414;InbreedingCoeff=-0.4182;MQ=41.36;MQ0=22;MQRankSum=-6.225;QD=11.58;ReadPosRankSum=7.003;VQSLOD=3.0314;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:36,10:45:99:329,0,490	1/1:2,1:3:6.01:81,6,0	0/0:55,0:25:59.26:0,59,1106	0/0:59,0:31:79.12:0,79,1328	0/0:39,0:38:53.95:0,54,1002	0/1:18,4:21:99:280,0,368	0/1:33,14:43:99:500,0,476	0/1:24,0:13:66.01:92,0,66	0/1:33,15:48:99:862,0,519	1/1:15,10:24:36.62:814,37,0	0/1:4,3:7:5.90:80,0,6	0/1:31,8:39:99:448,0,479	0/1:32,6:39:99:319,0,673	0/1:37,6:42:99:275,0,766	0/1:18,6:23:26.76:495,0,27	0/1:13,9:22:15.40:649,0,15	1/1:7,6:13:27.79:205,28,0	0/1:9,2:10:44.32:66,0,44	0/1:6,3:8:99:175,0,103	0/1:37,9:44:99:368,0,807	0/1:57,22:64:99:449,0,656	0/1:28,4:31:99:185,0,233	0/1:34,1:31:11.86:12,0,451	0/1:28,7:35:99:186,0,273	0/0:58,0:58:99:0,147,2693	0/1:11,10:20:9.05:630,0,9	0/1:5,3:9:1.30:262,0,1	1/1:4,3:7:0.27:192,0,0
chr10	10141597	.	CGTGTGTGTGTGTGTGT	C	768.38	PASS	AB=0.903;AC=17;AF=0.386;AN=44;BaseQRankSum=2.242;DP=539;FS=6.717;HRun=0;HaplotypeScore=198.4838;InbreedingCoeff=0.4368;MQ=70.71;MQ0=25;MQRankSum=-1.955;QD=4.15;ReadPosRankSum=-0.614;VQSLOD=2.1467;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:9,0:9:3.01:0,3,89	./.	./.	0/0:16,0:15:9.03:0,9,241	1/1:22,0:21:3:71,3,0	0/1:18,0:17:17.88:43,0,18	./.	1/1:15,0:17:3:32,3,0	0/0:18,0:16:6.91:0,7,143	0/0:6,0:5:3.01:0,3,67	1/1:18,1:19:3.01:64,3,0	1/1:22,1:23:9.03:264,9,0	1/1:21,1:22:12.04:197,12,0	0/0:17,0:17:15.03:0,15,426	0/0:19,0:18:21.07:0,21,518	0/0:28,0:27:22.32:0,22,659	0/0:10,0:9:9.03:0,9,324	1/1:15,0:15:2.45:106,2,0	0/1:19,0:17:67.90:93,0,68	./.	1/1:8,4:12:3.01:40,3,0	0/1:10,7:17:0:0,0,0	./.	0/0:8,0:8:6.02:0,6,179	0/0:19,0:17:4.73:0,5,97	0/0:23,0:23:27.09:0,27,636	0/0:8,0:9:9.03:0,9,239
chr10	10141647	.	T	TA	427.01	PASS	AB=0.918;AC=6;AF=0.115;AN=52;BaseQRankSum=6.101;DP=559;FS=0.929;HRun=0;HaplotypeScore=125.9854;InbreedingCoeff=-0.1319;MQ=41.98;MQ0=62;MQRankSum=-6.397;QD=3.62;ReadPosRankSum=-3.036;VQSLOD=2.6909;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:24:21.12:0,21,290	0/1:6,3:9:4.64:5,0,136	./.	./.	0/0:20,0:17:28.93:0,29,258	0/0:21,0:20:19.56:0,20,287	0/0:22,0:21:29.99:0,30,382	0/0:28,0:23:62.69:0,63,836	0/0:23,0:22:18.04:0,18,237	0/1:19,9:26:99:308,0,462	0/0:10,3:11:9.03:0,9,124	0/0:18,0:16:24.04:0,24,305	0/1:29,0:28:65.06:65,0,283	0/0:19,0:18:21.04:0,21,261	0/0:24,0:22:20.98:0,21,240	0/0:12,6:17:24.08:0,24,320	0/0:25,2:26:48.40:0,48,587	0/1:16,0:14:19.81:20,0,232	0/0:15,0:12:26.95:0,27,337	0/0:15,0:13:21.01:0,21,249	0/0:29,0:27:21.54:0,22,289	0/0:16,0:13:9.03:0,9,112	0/0:21,0:20:18.06:0,18,241	0/0:32,0:28:30.10:0,30,409	0/0:16,0:14:21.07:0,21,284	0/1:20,0:17:99:100,0,380	0/1:16,0:16:47.15:47,0,279	0/0:22,0:16:30.05:0,30,364
chr10	10141651	.	T	TA	500.90	PASS	AB=0.825;AC=5;AF=0.096;AN=52;BaseQRankSum=5.615;DP=555;FS=12.334;HRun=0;HaplotypeScore=129.5305;InbreedingCoeff=-0.1135;MQ=42.48;MQ0=56;MQRankSum=-5.488;QD=4.43;ReadPosRankSum=-3.371;VQSLOD=2.1801;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:26:20.57:0,21,263	0/0:8,0:9:2.66:0,3,126	./.	./.	0/0:21,0:18:23.96:0,24,170	0/0:22,0:21:23.97:0,24,298	0/0:20,0:20:29.71:0,30,303	0/0:26,0:22:63.21:0,63,867	0/0:24,0:23:17.82:0,18,183	0/1:32,0:29:38.55:39,0,470	0/0:13,0:12:9.03:0,9,124	0/0:17,0:16:9.06:0,9,93	0/1:16,12:28:99:108,0,293	0/0:17,0:16:14.73:0,15,105	0/0:22,0:22:9.98:0,10,117	0/1:17,1:17:23.54:24,0,226	0/0:24,0:23:41.82:0,42,433	0/0:15,0:13:24.41:0,24,261	0/0:18,0:15:31.25:0,31,360	0/0:15,0:13:18.15:0,18,202	0/0:29,0:27:21.40:0,21,245	0/0:17,0:14:1.84:0,2,7	0/0:22,0:21:10.97:0,11,97	0/0:32,0:28:24.80:0,25,299	0/0:10,4:12:15.05:0,15,207	0/1:15,6:19:99:318,0,290	0/1:8,6:14:99:127,0,142	0/0:20,0:14:4.79:0,5,216
chr10	10141658	.	A	AGTAT	5061.82	PASS	AB=0.788;AC=47;AF=0.940;AN=50;BaseQRankSum=0.238;DP=597;FS=0.000;HRun=0;HaplotypeScore=144.0163;InbreedingCoeff=0.1288;MQ=43.70;MQ0=51;MQRankSum=-1.383;QD=9.04;ReadPosRankSum=-0.556;VQSLOD=3.9780;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:18,11:31:3.01:71,3,0	1/1:5,0:8:2.94:18,3,0	./.	./.	1/1:7,11:19:2.41:70,2,0	1/1:10,13:25:3.01:71,3,0	1/1:15,5:20:9.03:213,9,0	1/1:33,0:29:15.02:278,15,0	1/1:13,11:25:7.27:145,7,0	1/1:17,0:36:53.57:445,54,0	0/1:6,0:15:0:0,0,0	1/1:17,0:18:24.07:520,24,0	1/1:15,0:28:17.88:162,18,0	1/1:16,0:19:27.09:569,27,0	./.	1/1:8,0:19:11.81:102,12,0	1/1:18,0:24:6.39:43,6,0	1/1:14,0:13:2.96:19,3,0	1/1:20,0:16:12.04:258,12,0	1/1:13,0:12:6.02:142,6,0	1/1:18,11:30:6:107,6,0	1/1:16,0:15:18.06:377,18,0	0/1:22,0:21:28.77:336,0,29	1/1:30,0:32:12.03:237,12,0	0/1:11,0:13:0:0,0,0	1/1:13,0:22:36.11:533,36,0	1/1:6,0:16:18.04:255,18,0	1/1:16,0:14:11.93:90,12,0
chr10	10141899	.	A	AGTACA	7497.57	PASS	AB=0.826;AC=52;AF=0.963;AN=54;BaseQRankSum=-2.792;DP=262;FS=22.550;HRun=0;HaplotypeScore=125.1872;InbreedingCoeff=-0.0606;MQ=111.68;MQ0=0;MQRankSum=-7.339;QD=29.17;ReadPosRankSum=3.449;VQSLOD=3.1051;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,0:10:24.08:302,24,0	1/1:0,0:3:6.02:77,6,0	0/1:19,1:27:91.93:396,0,92	0/1:14,0:20:99:176,0,164	1/1:4,0:11:24.05:325,24,0	1/1:2,0:8:21.07:301,21,0	1/1:0,0:14:39.12:492,39,0	1/1:0,0:10:30.10:465,30,0	1/1:0,0:7:15.05:181,15,0	1/1:2,0:8:24.03:301,24,0	./.	1/1:0,0:11:30.09:373,30,0	1/1:1,0:11:27.06:322,27,0	1/1:0,0:7:21.07:258,21,0	1/1:0,0:11:27.08:347,27,0	1/1:0,0:8:21.07:267,21,0	1/1:0,0:12:33.11:426,33,0	1/1:0,0:5:9.03:141,9,0	1/1:0,0:4:12.04:180,12,0	1/1:0,0:2:3.01:37,3,0	1/1:0,0:8:18.05:214,18,0	1/1:0,0:7:20.98:260,21,0	1/1:0,0:6:11.77:138,12,0	1/1:0,0:9:23.99:316,24,0	1/1:0,0:8:21.02:238,21,0	1/1:0,0:16:48.16:654,48,0	1/1:0,0:8:17.85:205,18,0	1/1:0,0:5:6.02:108,6,0
chr10	10143560	.	GTAA	G	6025.28	PASS	AB=0.994;AC=39;AF=0.750;AN=52;BaseQRankSum=2.034;DP=664;FS=2.686;HRun=0;HaplotypeScore=326.7485;InbreedingCoeff=-0.2719;MQ=44.71;MQ0=5;MQRankSum=6.467;QD=9.18;ReadPosRankSum=3.857;VQSLOD=3.8927;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:35,0:35:22.69:183,0,23	1/1:7,5:12:11.88:155,12,0	./.	./.	0/1:6,0:6:11.33:11,0,36	0/1:24,0:21:78.94:79,0,253	0/1:35,2:30:99:156,0,147	0/1:12,0:12:8.76:32,0,9	0/1:45,0:43:99:218,0,411	1/1:27,7:34:41.88:616,42,0	1/1:10,4:14:27.49:209,27,0	1/1:39,0:38:22.27:204,22,0	1/1:26,0:24:1.65:190,2,0	1/1:34,0:33:2.26:235,2,0	1/1:21,5:20:49.66:375,50,0	1/1:23,4:27:49.96:470,50,0	1/1:33,10:43:63.75:777,64,0	1/1:23,8:28:46.96:559,47,0	0/1:10,0:9:18.64:19,0,37	0/1:8,0:8:2.80:3,0,4	0/1:46,0:44:9.72:287,0,10	0/1:13,0:13:24.48:43,0,24	0/1:16,0:16:13.48:13,0,40	0/1:40,0:36:0.05:330,0,0	0/1:17,0:14:57.71:58,0,98	1/1:38,6:42:28.52:594,29,0	1/1:7,2:8:16.34:177,16,0	1/1:7,0:7:6.50:32,6,0
chr10	10143564	.	GTAA	G	3921.70	PASS	AB=0.834;AC=23;AF=0.442;AN=52;BaseQRankSum=15.243;DP=665;FS=63.241;HRun=0;HaplotypeScore=343.3000;InbreedingCoeff=-0.6134;MQ=45.06;MQ0=4;MQRankSum=-6.000;QD=6.37;ReadPosRankSum=13.231;VQSLOD=-0.1862;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:31,5:35:99:129,0,301	0/1:8,0:13:34.30:34,0,79	./.	./.	0/0:7,0:7:17:0,17,121	0/1:24,2:25:49.98:50,0,480	0/1:30,6:29:99:103,0,349	0/1:11,0:12:5.47:5,0,157	0/1:40,4:42:99:133,0,748	0/1:24,1:32:63.28:179,0,63	0/1:10,0:14:52.52:53,0,54	1/1:31,8:38:7.87:354,8,0	0/1:22,5:25:99:162,0,146	0/1:30,3:32:99:199,0,198	0/1:15,6:20:50.99:109,0,51	0/1:20,6:30:99:258,0,169	0/1:22,10:42:62.54:580,0,63	0/1:19,4:28:21.60:458,0,22	0/1:10,0:8:1.60:2,0,62	0/0:7,0:7:19.75:0,20,104	0/1:38,8:44:99:231,0,242	0/1:16,0:16:38.32:38,0,187	0/1:15,0:15:0.25:0,0,160	0/1:29,10:35:99:402,0,227	0/0:19,1:17:0.19:0,0,334	0/1:30,4:39:99:277,0,171	0/1:4,3:8:27.72:163,0,28	0/0:7,0:7:19.70:0,20,119
chr10	10144988	.	G	GCACA	7700.73	PASS	AB=0.832;AC=46;AF=0.852;AN=54;BaseQRankSum=2.953;DP=713;FS=3.602;HRun=0;HaplotypeScore=204.8698;InbreedingCoeff=0.2921;MQ=51.92;MQ0=10;MQRankSum=-3.150;QD=12.26;ReadPosRankSum=-0.180;VQSLOD=4.3300;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:19,24:53:58.45:1024,58,0	1/1:10,0:11:6.02:88,6,0	0/1:25,0:7:7.13:24,0,7	./.	0/0:17,0:18:24.03:0,24,313	1/1:18,0:19:9.09:101,9,0	1/1:23,0:22:10.34:149,10,0	1/1:24,1:26:18.76:228,19,0	1/1:24,0:24:7.98:89,8,0	1/1:28,0:29:50.27:488,50,0	1/1:19,0:19:1.32:43,1,0	1/1:11,7:23:18.27:339,18,0	1/1:15,14:31:41.61:840,42,0	1/1:12,11:25:20.81:422,21,0	1/1:21,0:22:6.95:56,7,0	1/1:17,0:17:7.51:94,8,0	1/1:20,0:21:20.89:223,21,0	1/1:14,0:17:32.88:331,33,0	0/1:13,0:17:56.95:57,0,110	1/1:12,12:26:21.07:504,21,0	0/1:25,21:57:9.51:652,0,10	0/1:12,6:22:33.30:210,0,33	1/1:3,5:17:23.29:393,23,0	1/1:17,11:40:39.86:601,40,0	0/0:25,0:28:7.82:0,8,628	1/1:30,0:29:42.47:464,42,0	1/1:21,0:20:22.09:193,22,0	1/1:10,0:10:8.95:89,9,0
chr10	10145049	.	AAC	A	6304.69	PASS	AB=0.943;AC=28;AF=0.500;AN=56;BaseQRankSum=12.672;DP=800;FS=4.800;HRun=0;HaplotypeScore=204.0171;InbreedingCoeff=0.8350;MQ=64.22;MQ0=0;MQRankSum=1.529;QD=17.42;ReadPosRankSum=4.148;VQSLOD=4.8591;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:51,1:52:80.45:0,80,1718	1/1:1,8:9:14.56:200,15,0	0/0:51,0:45:78.71:0,79,1148	0/0:38,1:35:57.06:0,57,816	0/1:25,1:26:13.53:14,0,781	1/1:5,0:24:45.45:224,45,0	1/1:8,0:25:17.52:86,18,0	0/1:33,3:36:41.62:42,0,818	1/1:6,0:23:19.39:140,19,0	1/1:12,20:33:69.02:802,69,0	1/1:6,13:19:39.08:463,39,0	0/0:23,1:24:6.22:0,6,735	0/0:29,1:30:29.24:0,29,935	0/0:25,0:25:23.13:0,23,873	1/1:6,26:33:68.56:821,69,0	1/1:7,13:20:38.95:480,39,0	1/1:9,19:28:41.39:597,41,0	1/1:5,11:16:33.10:406,33,0	0/0:20,0:20:11.46:0,11,669	0/0:23,0:23:48.16:0,48,782	0/0:67,0:67:99:0,132,2003	0/0:25,1:26:20.26:0,20,841	0/0:22,0:22:42.14:0,42,678	0/0:33,1:34:29.31:0,29,952	0/0:24,1:25:20.21:0,20,766	1/1:7,23:30:61.23:886,61,0	1/1:5,26:31:69.21:849,69,0	1/1:3,6:9:24.07:295,24,0
chr10	10146577	.	GCA	G	229.14	PASS	AB=0.948;AC=15;AF=0.288;AN=52;BaseQRankSum=2.451;DP=619;FS=4.488;HRun=0;HaplotypeScore=92.8691;InbreedingCoeff=0.1424;MQ=72.34;MQ0=12;MQRankSum=1.154;QD=1.00;ReadPosRankSum=-1.392;VQSLOD=1.0533;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:29:5.33:5,0,242	0/0:8,0:8:8.10:0,8,52	./.	./.	1/1:12,0:18:1.11:3,1,0	0/1:17,0:17:11.86:12,0,173	0/0:18,0:24:0.89:0,1,103	0/0:21,0:20:3.01:0,3,44	0/0:21,0:22:18.03:0,18,227	0/0:27,0:26:47.89:0,48,499	0/0:19,0:18:11.99:0,12,115	0/1:22,1:22:43.73:44,0,180	0/1:12,1:13:17.29:17,0,141	0/0:17,0:17:21.02:0,21,236	0/0:10,0:10:8.99:0,9,75	0/0:14,0:14:6.01:0,6,68	0/0:32,0:32:27:0,27,270	0/0:6,0:9:3.47:0,3,28	0/1:18,2:21:16.67:51,0,17	1/1:10,1:13:8.84:70,9,0	1/1:28,6:34:17.77:134,18,0	0/1:20,1:21:17.29:17,0,142	0/1:20,2:22:8.28:8,0,242	0/0:43,0:43:49.21:0,49,695	1/1:13,0:17:2.84:14,3,0	0/0:21,0:21:24.06:0,24,288	0/0:28,0:28:14.98:0,15,150	0/0:6,0:6:5.58:0,6,82
chr10	10146587	.	A	ACACACACA	1887.82	PASS	AB=1.000;AC=22;AF=0.423;AN=52;BaseQRankSum=-3.538;DP=645;FS=24.798;HRun=0;HaplotypeScore=161.5365;InbreedingCoeff=0.4740;MQ=59.39;MQ0=17;MQRankSum=-2.942;QD=6.86;ReadPosRankSum=-1.792;VQSLOD=1.0787;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:29:6.93:7,0,230	1/1:8,0:8:9.03:234,9,0	./.	./.	0/1:18,0:18:0.28:0,0,0	0/1:16,0:16:1.73:2,0,162	0/0:24,0:24:11.51:0,12,160	0/1:25,0:24:3.33:3,0,14	0/0:21,0:20:14.94:0,15,311	1/1:31,0:30:37.90:416,38,0	1/1:18,0:17:9.02:169,9,0	0/0:18,0:17:17.41:0,17,355	0/0:16,0:16:12.04:0,12,276	0/0:19,0:19:15.04:0,15,360	1/1:10,0:10:9.02:117,9,0	1/1:14,0:14:6.01:90,6,0	0/1:33,0:33:49.98:432,0,50	1/1:12,0:12:3.90:124,4,0	0/0:22,0:22:6.32:0,6,36	0/0:16,0:16:6.49:0,6,102	0/0:42,0:40:8.36:0,8,266	0/0:26,0:26:12.04:0,12,278	0/0:24,0:24:14.14:0,14,252	0/0:47,0:47:54.17:0,54,1268	0/0:19,0:19:2.72:0,3,56	0/1:23,0:23:53.01:233,0,53	1/1:24,4:29:10.35:172,10,0	1/1:9,0:9:8.93:63,9,0
chr10	10149680	.	GC	G	4882.35	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=6.460;DP=500;FS=1.181;HRun=10;HaplotypeScore=54.9959;InbreedingCoeff=0.9378;MQ=74.10;MQ0=0;MQRankSum=2.263;QD=20.69;ReadPosRankSum=3.888;VQSLOD=5.6256;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,37:46:99:885,102,0	0/0:7,0:8:14.85:0,15,137	0/0:15,1:17:0.13:0,0,261	0/0:15,0:15:8.17:0,8,99	0/0:19,0:20:44.82:0,45,434	0/0:24,0:24:60.10:0,60,636	0/0:14,0:14:36.08:0,36,388	1/1:5,26:31:74.94:644,75,0	0/0:11,1:12:10.04:0,10,339	0/0:19,1:20:15.85:0,16,373	0/0:11,0:11:21:0,21,207	1/1:1,11:12:26.99:234,27,0	1/1:2,21:23:62.98:547,63,0	1/1:4,15:19:38.06:381,38,0	0/0:22,2:24:51.10:0,51,549	0/0:20,0:20:48.08:0,48,502	0/0:19,0:19:48.11:0,48,521	0/0:12,0:12:36.10:0,36,398	1/1:3,14:16:35.97:307,36,0	1/1:3,8:12:20.99:182,21,0	1/1:3,27:30:77.98:676,78,0	1/1:1,13:14:35.67:297,36,0	1/1:1,16:17:41.99:365,42,0	1/1:1,14:15:41.99:365,42,0	0/0:19,0:19:42.07:0,42,436	0/0:14,0:14:17.40:0,17,305	0/0:10,0:10:29.75:0,30,309	0/0:5,0:5:15.03:0,15,158
chr10	10149807	.	TGAGAGA	T	1801.34	PASS	AB=0.955;AC=23;AF=0.411;AN=56;BaseQRankSum=-1.417;DP=607;FS=2.465;HRun=0;HaplotypeScore=186.3205;InbreedingCoeff=0.8435;MQ=71.06;MQ0=5;MQRankSum=4.497;QD=6.80;ReadPosRankSum=4.021;VQSLOD=2.2736;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:38,1:38:24.97:276,25,0	0/0:6,0:7:11.96:0,12,101	0/0:49,0:29:5.92:0,6,44	0/0:50,0:32:4.82:0,5,93	0/1:20,0:21:2.48:2,0,148	0/0:19,0:23:21.99:0,22,175	0/0:11,0:12:9.02:0,9,126	1/1:27,0:26:23.82:177,24,0	0/0:13,0:13:14.97:0,15,161	0/0:25,0:25:48.04:0,48,626	0/0:16,0:15:11.84:0,12,102	1/1:16,2:18:32.57:276,33,0	1/1:21,3:23:38.85:340,39,0	1/1:18,3:21:2.54:177,3,0	0/0:25,0:26:23.68:0,24,186	0/0:16,0:16:17.91:0,18,139	0/0:17,0:16:11.97:0,12,97	0/0:12,0:12:20.68:0,21,172	1/1:23,0:23:6.86:49,7,0	1/1:16,0:16:17.90:136,18,0	1/1:20,0:20:18.83:144,19,0	1/1:19,1:20:11.97:96,12,0	1/1:9,1:10:14.96:120,15,0	1/1:26,0:26:24.90:220,25,0	0/0:11,0:20:28.80:0,29,192	0/0:21,0:21:41.76:0,42,348	0/0:16,0:16:22.89:0,23,163	0/0:15,0:15:29.90:0,30,259
chr10	10149840	.	GAC	G	583.32	PASS	AB=0.963;AC=15;AF=0.278;AN=54;BaseQRankSum=-5.816;DP=549;FS=15.204;HRun=0;HaplotypeScore=172.4616;InbreedingCoeff=-0.1652;MQ=40.76;MQ0=15;MQRankSum=-0.196;QD=2.30;ReadPosRankSum=-1.218;VQSLOD=1.8250;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:32:38.85:0,39,535	0/1:8,0:8:7.41:34,0,7	./.	0/0:9,0:2:1.55:0,2,4	0/1:27,1:28:13.99:14,0,221	1/1:24,4:28:7.80:102,8,0	0/0:15,1:14:6.56:0,7,40	0/0:30,0:27:74:0,74,617	0/1:10,1:10:20.57:21,0,54	0/1:26,1:25:20:20,0,251	0/1:14,1:13:10.44:38,0,10	0/0:20,0:20:36.87:0,37,475	0/0:23,0:22:53.23:0,53,596	0/0:20,1:21:35.13:0,35,381	0/1:17,2:19:12.71:45,0,13	0/1:11,1:11:30.31:43,0,30	0/1:13,0:11:13.06:32,0,13	0/1:13,0:13:26.44:26,0,56	0/0:19,0:19:50.34:0,50,461	0/0:23,0:23:32.94:0,33,336	0/0:26,0:25:33.04:0,33,387	0/0:21,0:21:20.99:0,21,212	0/0:13,0:13:15.02:0,15,188	0/0:28,0:28:50.95:0,51,614	0/1:20,0:20:40.97:75,0,41	0/1:27,1:25:81.82:191,0,82	0/1:15,0:14:9.82:26,0,10	0/1:16,1:17:38.17:72,0,38
chr10	10149858	.	GAC	G	2154.88	PASS	AB=0.638;AC=19;AF=0.365;AN=52;BaseQRankSum=-0.911;DP=485;FS=8.363;HRun=0;HaplotypeScore=171.7559;InbreedingCoeff=0.4545;MQ=36.89;MQ0=16;MQRankSum=-4.992;QD=11.78;ReadPosRankSum=2.361;VQSLOD=2.6983;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:26:23.65:0,24,238	1/1:2,5:6:2.86:96,3,0	./.	./.	0/0:28,0:28:48.14:0,48,883	0/1:12,18:30:6.11:192,0,6	0/1:11,6:13:35.77:36,0,41	0/0:33,0:31:92.59:0,93,1064	0/1:4,7:10:7.91:107,0,8	0/1:9,15:22:49.70:608,0,50	0/0:3,7:10:2.77:0,3,15	0/0:18,0:18:37.92:0,38,333	0/0:21,0:19:34.63:0,35,274	0/0:17,0:17:17.88:0,18,170	1/1:4,12:16:7.05:90,7,0	1/1:5,6:10:3.07:80,3,0	1/1:5,5:8:8.94:107,9,0	1/1:6,5:10:20.54:229,21,0	0/0:26,0:23:31.98:0,32,507	0/0:17,0:17:17.46:0,17,158	0/0:22,0:21:3.96:0,4,184	0/0:18,0:18:8.52:0,9,107	0/0:15,0:14:12.02:0,12,130	0/0:23,0:23:35.93:0,36,403	0/0:15,0:15:25.85:0,26,451	1/1:6,15:19:36.89:544,37,0	1/1:4,9:12:5.62:86,6,0	0/1:4,8:12:10.16:154,0,10
chr10	10149860	.	CAGAG	C	452.52	PASS	AB=0.967;AC=23;AF=0.442;AN=52;BaseQRankSum=2.033;DP=484;FS=5.521;HRun=0;HaplotypeScore=189.2679;InbreedingCoeff=-0.0248;MQ=36.31;MQ0=16;MQRankSum=1.218;QD=1.33;ReadPosRankSum=-1.171;VQSLOD=2.1051;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:26:6.77:13,0,7	0/1:7,0:6:2.08:2,0,41	./.	./.	0/0:30,0:30:44.96:0,45,996	0/0:29,0:29:15.71:0,16,101	0/0:15,0:11:3.83:0,4,24	0/1:34,0:32:2.42:89,0,2	0/0:12,0:11:8.05:0,8,81	0/1:23,1:22:68.53:69,0,305	1/1:9,1:10:2.70:12,3,0	1/1:18,0:19:13.21:57,13,0	0/1:22,0:20:10.55:16,0,11	1/1:16,0:16:7.59:23,8,0	0/1:14,1:15:17.13:45,0,17	0/1:9,2:10:25.02:45,0,25	0/0:8,1:7:6.47:0,6,53	0/0:11,0:10:16.03:0,16,119	0/1:26,0:23:38.57:39,0,80	0/1:18,0:18:0.26:9,0,0	0/1:23,0:22:10.15:10,0,48	1/1:18,0:18:5.09:14,5,0	1/1:15,0:14:4.82:15,5,0	0/1:21,0:21:16.28:16,0,44	0/0:13,0:13:27.02:0,27,467	0/1:18,2:18:25.24:25,0,225	0/0:13,0:12:5.98:0,6,49	0/1:11,1:12:91.08:110,0,91
chr10	10149864	.	G	GAC	731.06	PASS	AB=0.977;AC=20;AF=0.385;AN=52;BaseQRankSum=-1.155;DP=495;FS=8.214;HRun=0;HaplotypeScore=191.6050;InbreedingCoeff=0.1447;MQ=35.58;MQ0=17;MQRankSum=-0.668;QD=2.50;ReadPosRankSum=1.268;VQSLOD=2.0166;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:31,0:29:2.93:3,0,28	0/0:6,0:5:2.65:0,3,64	./.	./.	0/0:29,0:29:45.01:0,45,688	0/0:27,0:27:16.87:0,17,116	0/0:16,0:12:5.98:0,6,47	1/1:35,0:33:36.17:164,36,0	0/0:12,1:12:15.75:0,16,115	0/0:25,0:24:54.64:0,55,475	1/1:10,0:10:2.74:12,3,0	0/1:19,0:19:60.01:90,0,60	0/1:21,0:19:47.59:52,0,48	0/1:15,0:15:2.77:88,0,3	0/1:14,2:16:1.09:1,0,22	0/1:11,0:10:5.63:6,0,45	0/0:11,0:9:8.60:0,9,75	0/0:11,0:10:18.85:0,19,153	0/1:28,0:24:64.27:160,0,64	1/1:18,0:18:14.69:79,15,0	0/1:20,1:20:12.92:61,0,13	1/1:17,0:17:5.45:37,5,0	1/1:14,0:13:6.38:40,6,0	0/1:22,2:24:45.10:66,0,45	0/0:15,0:15:20.84:0,21,398	0/0:22,0:20:9.14:0,9,276	0/0:13,0:11:5.79:0,6,51	0/1:12,0:12:33.49:33,0,97
chr10	10149870	.	CAG	C	3704.21	PASS	AB=0.955;AC=26;AF=0.464;AN=56;BaseQRankSum=-2.850;DP=512;FS=4.087;HRun=0;HaplotypeScore=172.1022;InbreedingCoeff=0.7604;MQ=38.86;MQ0=21;MQRankSum=0.960;QD=13.77;ReadPosRankSum=0.200;VQSLOD=3.3050;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:16,13:27:14.54:218,15,0	0/0:6,0:5:8.57:0,9,57	1/1:7,0:2:1.02:4,1,0	0/0:22,0:2:5.88:0,6,36	0/0:31,1:32:49.05:0,49,802	0/0:27,2:29:10.93:0,11,40	0/0:19,0:15:5.03:0,5,22	1/1:19,16:33:66.20:816,66,0	0/0:14,0:13:17.37:0,17,153	0/0:22,0:21:34.97:0,35,310	0/1:9,0:9:0.10:0,0,0	1/1:8,12:20:25.91:282,26,0	1/1:5,16:19:30.32:330,30,0	1/1:6,11:17:16.03:192,16,0	0/0:16,0:16:5.42:0,5,23	0/0:12,0:11:7.23:0,7,43	0/0:13,0:11:8.02:0,8,51	0/0:11,0:10:16.18:0,16,113	1/1:11,17:24:57.18:703,57,0	1/1:5,13:18:21.69:293,22,0	1/1:9,9:17:21.31:246,21,0	1/1:10,8:18:12.98:148,13,0	1/1:6,10:15:11.80:147,12,0	1/1:9,14:23:24.54:305,25,0	0/0:15,0:15:23.82:0,24,348	0/0:20,0:19:41.09:0,41,276	0/0:12,0:10:4.53:0,5,16	0/1:9,1:9:18.50:19,0,75
chr10	10149872	.	G	GAC	2128.97	PASS	AB=0.995;AC=23;AF=0.411;AN=56;BaseQRankSum=-2.525;DP=520;FS=8.607;HRun=0;HaplotypeScore=181.6634;InbreedingCoeff=0.5275;MQ=38.82;MQ0=21;MQRankSum=3.819;QD=7.77;ReadPosRankSum=1.002;VQSLOD=2.3320;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:29,1:28:9.31:121,9,0	0/0:6,0:5:11.78:0,12,86	1/1:8,0:2:3.22:13,3,0	0/0:23,0:2:5.95:0,6,62	0/0:33,0:33:46.49:0,46,734	0/0:28,0:28:12.71:0,13,107	0/0:21,0:16:5.81:0,6,38	0/1:35,1:34:50.45:435,0,50	0/0:14,0:13:18.16:0,18,179	0/0:22,0:21:35.58:0,36,593	0/1:8,0:8:0.01:0,0,0	0/1:19,0:19:51.97:148,0,52	0/1:22,0:21:13.17:118,0,13	1/1:17,0:17:7.76:131,8,0	0/0:17,0:17:4.36:0,4,36	0/0:12,0:11:3.06:0,3,65	0/0:13,0:11:11.47:0,11,102	0/0:10,0:9:18.52:0,19,218	1/1:28,1:25:39.85:656,40,0	1/1:16,1:17:22.21:161,22,0	1/1:19,2:20:19.76:157,20,0	1/1:17,1:18:10.88:102,11,0	1/1:15,1:15:11.11:106,11,0	1/1:20,2:22:20.76:152,21,0	0/0:15,0:15:17.88:0,18,351	0/0:20,0:19:45.07:0,45,527	0/0:12,0:10:5.80:0,6,65	0/1:10,0:9:21.20:21,0,154
chr10	10149892	.	GAGAC	G	1379.90	PASS	AB=0.931;AC=17;AF=0.304;AN=56;BaseQRankSum=1.333;DP=565;FS=14.153;HRun=0;HaplotypeScore=184.5815;InbreedingCoeff=0.4828;MQ=40.53;MQ0=22;MQRankSum=-4.966;QD=8.68;ReadPosRankSum=0.769;VQSLOD=2.0908;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:30:36.21:0,36,649	0/1:6,1:6:17.72:31,0,18	0/0:28,0:7:1.15:0,1,255	0/0:66,0:13:26.59:0,27,404	0/0:29,0:29:48.75:0,49,1023	0/1:20,1:21:7.05:152,0,7	0/1:23,2:21:10.57:66,0,11	0/0:34,0:34:81.18:0,81,1616	1/1:14,0:14:11.50:143,11,0	0/1:21,1:22:27.96:332,0,28	0/0:7,0:7:0.47:0,0,1	0/0:15,0:15:26.92:0,27,588	0/0:23,0:22:42.14:0,42,713	0/0:17,0:17:21.07:0,21,422	0/0:13,0:15:5.17:0,5,27	1/1:9,1:9:6:74,6,0	1/1:11,1:11:14.98:179,15,0	1/1:13,0:12:16.73:220,17,0	0/0:33,0:30:65.81:0,66,1177	0/0:19,0:19:40.65:0,41,745	0/0:23,0:23:23.65:0,24,538	0/0:12,0:12:13.70:0,14,354	0/0:16,0:15:21.07:0,21,418	0/0:26,0:26:32.60:0,33,695	0/0:11,0:11:24.43:0,24,500	0/1:16,1:16:19.34:163,0,19	1/1:11,0:9:5.60:70,6,0	1/1:7,0:6:11.71:129,12,0
chr10	10149894	.	GAC	G	135.99	PASS	AB=0.978;AC=10;AF=0.179;AN=56;BaseQRankSum=4.294;DP=562;FS=2.759;HRun=0;HaplotypeScore=177.2047;InbreedingCoeff=0.2941;MQ=40.84;MQ0=19;MQRankSum=-2.835;QD=1.26;ReadPosRankSum=1.703;VQSLOD=2.8550;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:32:40.56:0,41,584	0/0:8,0:7:6.91:0,7,90	0/0:28,0:7:15.14:0,15,238	0/0:65,0:13:26.38:0,26,359	0/0:29,1:30:48.78:0,49,876	0/1:19,0:19:4.21:22,0,4	0/0:24,0:21:6.35:0,6,25	0/0:34,0:34:96.16:0,96,1637	0/1:14,0:14:1.04:1,0,18	0/1:21,0:21:99:101,0,160	0/1:7,0:7:0.10:0,0,0	0/0:15,0:15:29.90:0,30,498	0/0:22,0:21:42.08:0,42,663	0/0:17,0:17:21.07:0,21,382	0/0:16,0:16:8.61:0,9,45	1/1:8,1:8:3.01:11,3,0	1/1:11,1:11:2.18:20,2,0	0/1:11,2:12:1.05:48,0,1	0/0:33,0:30:67.08:0,67,1162	0/0:19,0:19:39.71:0,40,673	0/0:24,0:24:26.95:0,27,487	0/0:13,0:13:16.70:0,17,304	0/0:16,0:15:21.07:0,21,394	0/0:26,0:26:32.99:0,33,595	0/0:11,0:11:26.30:0,26,383	0/1:13,0:13:56.09:56,0,134	0/0:11,0:9:2.33:0,2,9	0/0:7,0:6:0.97:0,1,26
chr10	10149898	.	GAC	G	354.26	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=4.654;DP=553;FS=3.898;HRun=0;HaplotypeScore=174.8099;InbreedingCoeff=0.3050;MQ=43.13;MQ0=17;MQRankSum=-4.884;QD=2.55;ReadPosRankSum=0.090;VQSLOD=2.7851;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:31:30.73:0,31,684	0/0:8,0:7:5.48:0,5,28	0/0:30,0:7:6.01:0,6,236	0/0:69,0:14:26.25:0,26,445	0/0:29,1:30:43.18:0,43,779	0/1:21,0:21:33.81:34,0,48	0/1:25,0:22:23.31:23,0,61	0/0:31,0:31:90.18:0,90,1526	0/1:15,0:15:18.59:34,0,19	0/1:19,0:19:3.10:154,0,3	0/1:6,0:6:0.10:0,0,0	0/0:15,0:15:32.95:0,33,615	0/0:21,0:20:45.13:0,45,754	0/0:16,0:16:21.06:0,21,373	0/0:13,0:13:4.12:0,4,18	1/1:8,2:9:6.11:37,6,0	1/1:12,0:11:7.87:44,8,0	1/1:11,2:12:17.26:95,17,0	0/0:29,0:27:66.14:0,66,1186	0/0:20,0:20:42.72:0,43,702	0/0:26,0:26:29.97:0,30,558	0/0:12,0:12:16.71:0,17,344	0/0:16,0:15:24.08:0,24,444	0/0:25,0:25:36.04:0,36,668	0/0:11,0:11:26.30:0,26,383	0/1:12,0:12:27.70:73,0,28	0/0:10,0:8:1.11:0,1,6	0/1:6,0:5:14.90:15,0,15
chr10	10149914	.	C	CAGAGAGAG	1878.29	PASS	AB=0.993;AC=27;AF=0.500;AN=54;BaseQRankSum=0.419;DP=619;FS=5.042;HRun=0;HaplotypeScore=213.3214;InbreedingCoeff=0.5119;MQ=46.93;MQ0=22;MQRankSum=-4.248;QD=5.43;ReadPosRankSum=-6.470;VQSLOD=0.6307;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:30.07:0,30,295	1/1:11,0:10:6.89:70,7,0	./.	0/1:88,0:17:8.13:25,0,8	1/1:28,1:32:26:364,26,0	1/1:22,0:22:12.20:332,12,0	0/1:23,0:20:22.55:50,0,23	0/0:37,0:37:7.85:0,8,271	0/1:16,0:16:2.99:72,0,3	0/1:18,0:18:0.92:191,0,1	0/0:7,0:7:0.47:0,0,2	0/0:16,0:17:17.40:0,17,204	0/0:20,0:19:16.49:0,16,168	0/0:13,0:14:14.64:0,15,164	1/1:14,0:14:12.89:117,13,0	1/1:14,0:14:17.83:148,18,0	1/1:12,0:11:4.83:41,5,0	1/1:15,0:14:11.92:134,12,0	0/0:25,0:24:12:0,12,112	0/0:20,0:21:0.11:0,0,269	0/1:27,0:28:15.78:16,0,93	0/0:9,0:10:6.25:0,6,44	0/0:17,0:17:17.93:0,18,240	0/0:28,0:27:14.98:0,15,213	1/1:7,7:15:6.02:141,6,0	1/1:15,0:15:19.49:151,19,0	1/1:17,0:15:17.92:187,18,0	1/1:6,0:5:2.99:24,3,0
chr10	10149916	.	G	GAC	6455.39	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=-2.479;DP=627;FS=0.431;HRun=0;HaplotypeScore=153.9214;InbreedingCoeff=0.5361;MQ=46.13;MQ0=20;MQRankSum=2.798;QD=18.60;ReadPosRankSum=1.036;VQSLOD=4.8031;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,23:36:40.80:883,41,0	0/0:11,0:10:0.41:0,0,71	0/0:42,0:7:10.60:0,11,95	0/0:87,0:18:29.74:0,30,256	0/0:30,0:30:37.14:0,37,357	0/0:23,0:23:6.31:0,6,219	0/0:23,0:20:20.48:0,20,190	1/1:26,10:36:72.99:964,73,0	0/1:17,0:17:4.80:5,0,78	0/1:19,0:19:3.19:3,0,212	0/1:5,0:5:0:0,0,0	1/1:10,7:17:28.62:425,29,0	1/1:7,13:19:41.71:609,42,0	1/1:4,11:15:27:380,27,0	0/0:14,0:14:10.24:0,10,65	0/1:15,0:15:39.64:40,0,59	0/1:11,0:10:16.34:23,0,16	0/1:15,0:14:11.88:12,0,74	1/1:21,4:24:60.59:614,61,0	1/1:9,13:22:34.33:559,34,0	1/1:13,17:32:39.51:568,40,0	1/1:8,1:9:18:193,18,0	1/1:7,10:17:25.18:524,25,0	1/1:15,13:27:38.04:648,38,0	0/0:16,0:16:8.96:0,9,204	0/0:15,0:15:13.33:0,13,168	0/0:19,0:17:14.11:0,14,121	0/1:7,0:6:4.89:5,0,22
chr10	10150859	.	G	GGTTTT	3607.50	PASS	AB=0.625;AC=7;AF=0.125;AN=56;BaseQRankSum=-6.990;DP=747;FS=20.520;HRun=0;HaplotypeScore=184.0242;InbreedingCoeff=0.8054;MQ=75.07;MQ0=1;MQRankSum=-7.086;QD=34.69;ReadPosRankSum=-5.279;VQSLOD=1.3314;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:57:99:0,129,2350	0/0:15,0:15:27.09:0,27,502	0/0:40,0:32:28.90:0,29,474	0/0:35,0:27:13.58:0,14,283	0/0:25,0:25:42.14:0,42,771	0/0:27,0:27:42.13:0,42,745	0/0:28,0:28:60.17:0,60,1054	1/1:17,8:27:45.15:1163,45,0	0/0:17,0:17:33.11:0,33,608	0/0:37,0:37:69.23:0,69,1252	0/0:18,0:18:45.14:0,45,789	0/0:29,0:29:63.20:0,63,1137	0/0:24,0:24:45.15:0,45,838	0/0:22,0:22:57.18:0,57,1023	0/0:25,0:25:45.15:0,45,833	0/0:25,0:25:60.21:0,60,1107	0/0:41,0:41:93.32:0,93,1734	0/0:19,0:19:36.10:0,36,626	1/1:20,9:30:36.08:883,36,0	0/1:10,15:25:16.84:936,0,17	1/1:13,8:22:24.08:626,24,0	0/0:33,0:33:72.25:0,72,1330	0/0:19,0:19:39.10:0,39,653	0/0:25,0:25:63.22:0,63,1166	0/0:24,0:24:60.21:0,60,1094	0/0:29,0:29:54.19:0,54,1002	0/0:21,0:21:42.14:0,42,771	0/0:8,0:7:6.02:0,6,112
chr10	10151142	.	CGT	C	4288.16	PASS	AB=0.835;AC=29;AF=0.558;AN=52;BaseQRankSum=-7.288;DP=916;FS=9.549;HRun=0;HaplotypeScore=157.9181;InbreedingCoeff=0.5626;MQ=64.12;MQ0=26;MQRankSum=-1.568;QD=8.93;ReadPosRankSum=2.810;VQSLOD=4.1357;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:24:17.98:0,18,153	1/1:11,0:12:5.51:28,6,0	./.	./.	1/1:10,9:19:17.88:182,18,0	1/1:10,9:17:18.05:201,18,0	1/1:23,14:39:37.48:302,37,0	0/1:31,0:28:8.79:9,0,62	1/1:22,17:38:26.47:528,26,0	0/1:32,10:41:19.24:391,0,19	1/1:8,5:13:18.05:200,18,0	0/0:17,0:36:20.99:0,21,182	0/0:19,0:35:11.66:0,12,96	0/0:13,0:30:15:0,15,132	0/1:30,12:40:45.72:266,0,46	1/1:24,11:34:32.93:349,33,0	1/1:15,15:28:18.14:319,18,0	0/1:6,11:17:38.21:207,0,38	0/1:16,0:16:9.19:9,0,21	0/0:18,0:25:32.96:0,33,313	0/0:57,0:80:43.30:0,43,576	0/0:37,0:46:38.34:0,38,489	0/0:16,0:26:26.99:0,27,232	0/0:22,0:58:55.80:0,56,497	1/1:14,15:31:47.63:477,48,0	1/1:27,12:39:41.17:351,41,0	1/1:19,9:29:35.12:320,35,0	1/1:7,6:15:0.27:148,0,0
chr10	10151252	.	AGT	A	2589.95	PASS	AB=0.854;AC=23;AF=0.500;AN=46;BaseQRankSum=0.884;DP=830;FS=13.467;HRun=0;HaplotypeScore=157.5661;InbreedingCoeff=0.6695;MQ=27.07;MQ0=309;MQRankSum=0.621;QD=6.82;ReadPosRankSum=1.118;VQSLOD=2.7515;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:8:6.02:0,6,86	1/1:1,14:12:15.04:194,15,0	./.	./.	0/1:33,0:22:0:0,0,1	0/1:4,14:14:0:0,0,0	./.	0/0:27,0:9:21.07:0,21,331	1/1:5,34:31:28.24:425,28,0	1/1:9,22:22:49.97:632,50,0	0/0:1,14:14:0:0,0,0	0/0:41,0:29:33.11:0,33,549	0/0:39,0:30:29.77:0,30,419	1/1:39,0:28:0.21:1,0,0	1/1:4,35:31:12.03:157,12,0	1/1:6,42:39:17.77:231,18,0	1/1:9,20:17:5.69:50,6,0	0/0:3,7:4:2.74:0,3,12	0/0:15,0:6:18.06:0,18,278	0/0:15,0:7:6.02:0,6,89	0/0:65,0:25:3.01:0,3,51	0/0:33,0:21:3.01:0,3,51	0/1:18,0:13:0:0,0,0	./.	./.	1/1:2,26:25:25.72:783,26,0	1/1:3,32:33:21.05:265,21,0	1/1:0,7:5:0.47:1,0,0
chr10	10151553	.	ATG	A	143.38	PASS	AB=0.940;AC=16;AF=0.471;AN=34;BaseQRankSum=0.635;DP=453;FS=0.000;HRun=0;HaplotypeScore=51.8025;InbreedingCoeff=0.3246;MQ=23.61;MQ0=272;MQRankSum=0.508;QD=0.82;ReadPosRankSum=-1.080;VQSLOD=1.1490;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:20,4:10:0:0,0,0	0/0:2,0:2:0:0,0,0	./.	./.	0/0:35,0:19:18.06:0,18,308	1/1:3,0:2:3.01:39,3,0	1/1:15,0:5:0.47:1,0,0	1/1:20,0:2:0.64:32,1,0	./.	./.	./.	./.	1/1:14,1:5:3.01:36,3,0	./.	./.	./.	./.	1/1:10,5:8:6.02:80,6,0	0/0:15,0:1:0.89:0,1,2	0/0:18,0:9:3.01:0,3,52	0/1:45,1:10:0:0,0,0	./.	0/0:6,0:4:0:0,0,0	1/1:22,0:11:2.99:23,3,0	0/0:32,0:21:12.92:0,13,203	0/1:11,1:4:29.93:30,0,30	0/0:6,0:4:2.98:0,3,22	0/1:2,0:1:0:0,0,0
chr10	10151576	.	AGT	A	92.94	PASS	AB=0.941;AC=7;AF=0.219;AN=32;BaseQRankSum=-1.798;DP=498;FS=13.945;HRun=0;HaplotypeScore=43.6440;InbreedingCoeff=0.2723;MQ=17.58;MQ0=324;MQRankSum=0.415;QD=0.72;ReadPosRankSum=-1.134;VQSLOD=-0.2078;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	0/0:2,0:2:0:0,0,0	./.	./.	0/0:37,0:18:6:0,6,74	./.	0/0:10,6:6:2.48:0,2,17	0/0:23,0:13:20.26:0,20,147	./.	1/1:5,10:6:12.03:144,12,0	./.	./.	1/1:12,0:4:0.38:1,0,0	./.	./.	./.	./.	0/0:6,10:3:2.68:0,3,11	0/0:16,0:1:2.88:0,3,15	0/0:25,0:13:3.48:0,3,52	0/1:57,0:9:0.04:0,0,0	./.	0/0:7,0:5:0:0,0,0	0/1:25,0:3:0:0,0,0	0/0:36,0:23:2.80:0,3,14	0/1:10,3:4:17.59:33,0,18	0/0:4,3:3:5.27:0,5,24	0/0:4,1:1:2.96:0,3,19
chr10	10151598	.	TGTGTGTGA	T	221.24	PASS	AB=0.967;AC=15;AF=0.357;AN=42;BaseQRankSum=-0.456;DP=653;FS=8.846;HRun=0;HaplotypeScore=56.1270;InbreedingCoeff=0.2928;MQ=17.13;MQ0=432;MQRankSum=-1.552;QD=0.66;ReadPosRankSum=-2.647;VQSLOD=-0.3621;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:4:0:0,0,0	./.	./.	./.	0/0:36,0:18:2.64:0,3,129	./.	0/0:19,0:6:2.77:0,3,20	0/0:37,0:11:2.76:0,3,200	0/1:31,0:9:0:0,0,0	0/1:23,0:8:37.40:37,0,516	0/0:15,0:8:0:0,0,0	./.	0/1:23,0:4:0:0,0,0	./.	./.	0/1:13,0:2:0:0,0,0	1/1:17,1:3:3.01:69,3,0	1/1:16,8:9:9.03:202,9,0	0/0:12,0:1:3:0,3,27	0/0:26,0:17:3.46:0,3,130	0/1:72,22:27:0:0,0,0	0/0:11,0:5:0:0,0,0	0/1:12,0:7:0.33:0,0,0	0/1:28,4:8:0:0,0,0	0/1:33,0:20:0:0,0,0	0/0:13,0:4:11.70:0,12,125	0/0:14,0:5:2.88:0,3,45	1/1:5,0:1:0.47:1,0,0
chr10	10151688	.	A	AGTGT	746.66	PASS	AB=0.889;AC=19;AF=0.475;AN=40;BaseQRankSum=-0.931;DP=777;FS=45.474;HRun=0;HaplotypeScore=86.1435;InbreedingCoeff=0.1897;MQ=18.67;MQ0=434;MQRankSum=-1.829;QD=1.82;ReadPosRankSum=0.128;VQSLOD=-0.2281;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:35,13:17:0:0,0,0	0/1:4,1:4:0:0,0,0	./.	./.	0/0:37,0:23:0:0,0,1	0/0:11,0:4:0:0,0,0	./.	1/1:28,0:3:3.01:47,3,0	1/1:30,1:7:0.47:1,0,0	0/1:34,0:20:97.90:98,0,613	0/0:10,0:10:0.47:0,0,1	./.	0/0:27,3:9:5.98:0,6,105	0/0:17,5:7:0.47:0,0,1	0/0:17,0:6:0:0,0,0	./.	0/1:18,2:3:43.43:136,0,43	1/1:23,2:13:14.64:265,15,0	1/1:16,3:3:9.03:229,9,0	1/1:19,3:17:0.19:0,0,0	./.	0/1:35,0:25:0.11:0,0,0	0/1:28,0:25:0.10:0,0,0	0/1:34,6:17:0:0,0,0	0/1:29,0:13:0.01:0,0,0	0/1:21,1:6:58.73:59,0,131	./.	./.
chr10	10151708	.	A	AGT	85.30	PASS	AB=0.905;AC=14;AF=0.389;AN=36;BaseQRankSum=3.584;DP=665;FS=23.062;HRun=0;HaplotypeScore=81.2788;InbreedingCoeff=0.3271;MQ=18.24;MQ0=367;MQRankSum=-0.694;QD=0.33;ReadPosRankSum=-1.156;VQSLOD=-0.2213;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	0/1:28,0:19:0.16:0,0,0	./.	./.	./.	0/1:25,9:4:0.03:0,0,0	0/0:27,3:20:30.10:0,30,385	0/1:8,1:8:0.09:0,0,0	./.	0/0:27,1:8:2.99:0,3,38	0/1:18,4:9:0:0,0,0	./.	1/1:14,2:8:3.01:38,3,0	1/1:24,1:4:0.47:1,0,0	1/1:18,1:7:8.59:83,9,0	0/0:23,0:5:3.01:0,3,39	0/1:20,2:17:0.16:0,0,0	0/0:59,3:7:0:0,0,0	0/1:26,3:20:0.01:0,0,0	0/0:26,3:22:0:0,0,1	0/0:31,2:12:0:0,0,0	0/1:32,0:15:0.08:0,0,0	0/1:19,3:8:49.10:49,0,128	0/0:9,0:4:9.03:0,9,111	./.
chr10	10151792	.	A	AGT	66	PASS	AB=0.709;AC=15;AF=0.536;AN=28;BaseQRankSum=2.439;DP=383;FS=6.678;HRun=0;HaplotypeScore=34.1399;InbreedingCoeff=0.3525;MQ=26.27;MQ0=116;MQRankSum=-3.305;QD=0.59;ReadPosRankSum=-1.412;VQSLOD=-0.1425;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	0/0:40,0:2:2.50:0,2,9	0/0:34,0:29:60.18:0,60,757	./.	./.	1/1:17,0:3:2.97:20,3,0	./.	0/1:10,4:5:13.28:13,0,19	./.	./.	./.	0/0:10,7:6:3.35:0,3,39	0/1:7,1:3:0.08:0,0,0	0/1:4,5:2:0:0,0,0	1/1:6,1:3:4.50:21,4,0	1/1:1,3:2:3.01:51,3,0	./.	0/1:6,8:4:0:0,0,0	./.	./.	0/1:7,12:2:0:0,0,0	./.	0/0:27,0:21:36.03:0,36,462	./.	1/1:5,7:5:3.01:37,3,0	1/1:2,1:2:2.98:21,3,0
chr10	10151829	.	TTGTGTGAGTGCG	T	318.97	PASS	AB=0.713;AC=10;AF=0.455;AN=22;BaseQRankSum=1.542;DP=283;FS=9.551;HRun=0;HaplotypeScore=68.6976;InbreedingCoeff=0.5866;MQ=62.26;MQ0=30;MQRankSum=-2.860;QD=6.65;ReadPosRankSum=1.286;VQSLOD=0.5724;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:50,0:18:51.17:0,51,1470	0/0:48,0:23:54.47:0,54,1800	0/0:35,0:35:68.79:0,69,3607	./.	./.	1/1:5,2:4:6.02:195,6,0	./.	./.	./.	./.	./.	0/1:5,9:5:0:0,0,0	1/1:3,4:5:0.47:1,0,0	./.	0/0:1,0:1:0.89:0,1,2	./.	./.	./.	./.	./.	0/1:7,2:1:0:0,0,0	./.	0/0:24,0:24:56.93:0,57,2859	./.	1/1:5,5:4:3.01:106,3,0	1/1:0,1:1:3.01:107,3,0
chr10	10151908	.	A	AGT	4153.28	PASS	AB=0.766;AC=40;AF=0.714;AN=56;BaseQRankSum=0.264;DP=599;FS=7.512;HRun=0;HaplotypeScore=117.9331;InbreedingCoeff=0.1640;MQ=33.93;MQ0=79;MQRankSum=-3.464;QD=8.48;ReadPosRankSum=0.823;VQSLOD=2.7314;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:21,9:28:5.08:114,5,0	1/1:3,8:9:2.65:28,3,0	0/0:24,0:2:6.02:0,6,72	0/0:15,0:3:9.03:0,9,111	0/0:32,0:30:16.13:0,16,395	1/1:0,6:6:6.02:100,6,0	0/1:9,17:24:57.61:153,0,58	0/1:40,3:15:19.84:178,0,20	1/1:11,6:11:9.26:79,9,0	1/1:19,29:41:12.97:970,13,0	0/1:7,6:9:0:0,0,0	0/1:10,3:10:8.11:24,0,8	1/1:7,9:15:4.19:234,4,0	1/1:14,5:17:5.88:57,6,0	1/1:8,6:11:5.75:62,6,0	1/1:5,13:12:6.02:100,6,0	0/1:3,13:14:16.65:277,0,17	1/1:3,6:8:18.06:293,18,0	0/1:20,2:9:62.51:119,0,63	1/1:18,4:22:3.01:50,3,0	1/1:11,17:19:6.02:100,6,0	1/1:7,5:14:5.93:67,6,0	1/1:11,6:16:3.01:50,3,0	1/1:7,14:21:12.04:199,12,0	0/0:38,0:36:77.26:0,77,926	0/1:23,8:23:58.29:645,0,58	0/1:18,5:17:3.88:107,0,4	1/1:2,3:4:9.03:150,9,0
chr10	10151918	.	TGTATGTGTGTGA	T	1603.92	PASS	AB=0.971;AC=29;AF=0.518;AN=56;BaseQRankSum=3.229;DP=658;FS=8.691;HRun=0;HaplotypeScore=180.3795;InbreedingCoeff=-0.1251;MQ=34.89;MQ0=60;MQRankSum=-2.271;QD=3.10;ReadPosRankSum=-2.501;VQSLOD=1.7909;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:14,21:32:5.57:99,6,0	0/1:12,0:10:26.46:26,0,108	0/0:12,0:2:6.02:0,6,96	0/0:13,0:4:11.42:0,11,160	0/0:34,0:31:46.67:0,47,1151	0/1:8,0:7:2.07:2,0,287	0/1:31,0:29:60.63:61,0,109	0/1:38,0:14:24.65:25,0,58	0/0:24,0:18:5.35:0,5,105	0/1:53,0:46:99:405,0,568	0/0:16,0:12:0.89:0,1,2	1/1:6,16:18:3.90:115,4,0	0/1:12,6:18:34.60:35,0,63	1/1:9,14:22:8.92:333,9,0	0/1:13,0:11:24.83:25,0,44	0/1:21,0:14:5.31:5,0,153	0/1:19,0:16:29.94:30,0,348	0/1:11,0:10:63.86:64,0,81	0/1:22,4:12:99:123,0,122	1/1:6,20:26:2.60:10,3,0	1/1:32,0:22:4.07:12,4,0	1/1:20,1:21:1.49:50,1,0	1/1:7,13:19:2.68:12,3,0	1/1:23,3:24:9.52:99,10,0	0/0:37,0:34:86.49:0,86,2559	0/1:38,0:28:99:125,0,738	0/1:24,0:20:99:106,0,117	0/0:5,0:4:0.36:0,0,87
chr10	10151930	.	AGTGTGTGTGTGTGT	A	1129.96	PASS	AB=0.919;AC=19;AF=0.339;AN=56;BaseQRankSum=1.058;DP=660;FS=6.240;HRun=0;HaplotypeScore=196.9943;InbreedingCoeff=0.3552;MQ=35.28;MQ0=56;MQRankSum=-0.915;QD=3.41;ReadPosRankSum=-2.224;VQSLOD=1.9562;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:34,0:31:4.85:84,5,0	0/0:7,0:9:11.55:0,12,203	0/0:10,0:2:6.02:0,6,119	0/0:8,0:3:6.02:0,6,176	0/0:31,0:29:38.42:0,38,1414	0/0:11,0:9:7.96:0,8,382	0/0:27,0:28:26.11:0,26,278	1/1:27,0:10:3.01:46,3,0	0/0:6,0:21:13.63:0,14,116	0/1:50,0:43:46.81:47,0,1107	0/0:18,0:14:0.89:0,1,2	1/1:22,0:18:3.01:101,3,0	0/0:17,0:17:2.30:0,2,130	1/1:24,0:23:12.04:298,12,0	0/0:16,0:13:3.98:0,4,112	0/0:22,0:15:2.88:0,3,184	0/0:24,0:20:2.01:0,2,490	0/1:6,0:11:21.03:21,0,114	0/1:23,0:10:90.81:193,0,91	1/1:28,0:28:6.02:90,6,0	1/1:32,0:23:6.49:125,6,0	0/1:9,19:28:13.57:38,0,14	0/1:19,0:18:0:0,0,0	1/1:32,0:29:12.76:251,13,0	0/0:34,0:32:49.67:0,50,2627	0/0:35,0:27:35.70:0,36,1133	0/0:25,0:22:11.87:0,12,389	0/0:5,0:4:3.01:0,3,103
chr10	10152705	.	T	TA	6337.14	PASS	AB=0.585;AC=24;AF=0.429;AN=56;BaseQRankSum=-12.716;DP=619;FS=2.879;HRun=10;HaplotypeScore=66.8683;InbreedingCoeff=0.8360;MQ=77.00;MQ0=0;MQRankSum=-1.875;QD=23.21;ReadPosRankSum=1.357;VQSLOD=5.7422;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:83.86:0,84,690	1/1:0,5:5:15.04:160,15,0	0/0:15,0:16:23.74:0,24,180	0/0:16,0:15:24.29:0,24,186	0/0:26,0:28:66.97:0,67,529	1/1:3,20:23:51.13:544,51,0	1/1:5,16:21:23.48:455,23,0	0/0:30,0:30:62.88:0,63,515	1/1:5,18:23:45.10:473,45,0	1/1:6,26:32:81.16:851,81,0	0/1:6,13:19:13.32:247,0,13	0/0:18,0:19:49.97:0,50,400	0/0:13,0:13:29.96:0,30,246	0/0:20,0:20:38.88:0,39,314	1/1:7,17:24:4.85:462,5,0	1/1:4,23:27:63.16:672,63,0	1/1:2,17:19:45.11:480,45,0	0/1:5,14:19:25.72:367,0,26	0/0:30,1:31:39.91:0,40,532	0/0:32,0:33:85.27:0,85,679	0/0:19,0:19:53.92:0,54,443	0/0:23,1:24:47.88:0,48,393	0/0:21,0:21:47.92:0,48,394	0/0:19,0:20:47.92:0,48,394	0/0:22,0:23:43.93:0,44,351	1/1:2,17:19:51.10:528,51,0	1/1:3,23:26:41.52:647,42,0	1/1:1,15:16:43.35:451,43,0
chr10	10155463	.	GAA	G	8626.27	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=7.655;DP=585;FS=5.519;HRun=12;HaplotypeScore=110.3950;InbreedingCoeff=0.9911;MQ=73.24;MQ0=3;MQRankSum=-3.388;QD=17.50;ReadPosRankSum=1.488;VQSLOD=4.0060;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,0:19:43.91:190,44,0	1/1:1,8:8:21.04:214,21,0	0/0:23,0:18:19.26:0,19,274	0/0:14,0:12:14.99:0,15,155	0/0:27,0:30:80.72:0,81,1129	1/1:3,27:30:53.84:602,54,0	1/1:1,14:15:33.07:336,33,0	1/1:3,0:17:38.40:166,38,0	1/1:4,15:19:39.07:397,39,0	1/1:4,35:40:99:1062,108,0	1/1:1,19:20:57.13:580,57,0	1/1:2,0:16:35.67:154,36,0	1/1:3,0:21:46.63:202,47,0	1/1:1,0:13:32.92:142,33,0	1/1:6,20:27:38.37:549,38,0	1/1:4,14:18:39.02:386,39,0	1/1:1,18:19:51.12:519,51,0	1/1:3,12:15:36.06:366,36,0	1/1:2,0:12:24.08:100,24,0	1/1:5,0:29:52.09:225,52,0	1/1:1,0:22:38.40:166,38,0	1/1:3,2:22:52.65:256,53,0	1/1:1,0:17:41.16:178,41,0	1/1:4,0:26:43.90:190,44,0	0/0:18,1:24:34.15:0,34,768	1/1:2,23:25:66.11:671,66,0	1/1:4,25:29:72.15:732,72,0	1/1:0,11:11:24.05:244,24,0
chr10	10155934	.	GCACACA	G	2498.47	PASS	AB=0.736;AC=32;AF=0.615;AN=52;BaseQRankSum=4.110;DP=608;FS=2.407;HRun=0;HaplotypeScore=137.7342;InbreedingCoeff=0.5054;MQ=59.13;MQ0=23;MQRankSum=-7.377;QD=6.72;ReadPosRankSum=-2.412;VQSLOD=2.3020;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:27,4:31:9.02:163,9,0	0/0:8,0:10:11.18:0,11,169	./.	./.	1/1:8,0:16:6.94:66,7,0	1/1:9,10:20:18.06:345,18,0	1/1:24,4:28:9.49:183,9,0	0/0:23,0:23:0.57:0,1,1	1/1:7,7:15:12.04:224,12,0	0/0:20,0:23:25.40:0,25,375	0/0:13,0:17:14.96:0,15,206	1/1:6,8:16:24.08:448,24,0	1/1:9,5:14:9.03:182,9,0	1/1:9,2:12:12.04:212,12,0	0/1:17,1:29:32.37:32,0,377	0/0:8,0:11:9.03:0,9,115	0/1:11,1:24:23.97:24,0,446	0/0:11,0:22:19.07:0,19,246	1/1:14,0:18:12.04:160,12,0	1/1:11,0:13:4.62:81,5,0	1/1:46,0:46:9.50:133,10,0	1/1:7,4:13:6.91:86,7,0	1/1:5,5:11:9.01:163,9,0	0/1:25,6:33:51.72:52,0,75	1/1:15,0:20:6.02:84,6,0	0/0:18,0:22:14.19:0,14,245	0/0:14,0:20:23.15:0,23,353	0/1:6,1:8:45.14:45,0,169
chr10	10157276	.	TC	T	2100.18	PASS	AB=0.733;AC=21;AF=0.375;AN=56;BaseQRankSum=-6.899;DP=367;FS=2.936;HRun=9;HaplotypeScore=72.0666;InbreedingCoeff=0.9110;MQ=96.92;MQ0=0;MQRankSum=-0.817;QD=17.65;ReadPosRankSum=0.723;VQSLOD=3.9891;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,20:24:48.01:439,48,0	0/0:11,0:11:32.66:0,33,224	0/0:33,0:24:37.27:0,37,346	0/0:46,0:37:41.20:0,41,503	0/0:13,0:13:30.09:0,30,345	0/0:10,0:10:23.69:0,24,158	0/0:22,0:22:56.22:0,56,371	0/1:6,4:11:4.84:95,0,5	0/0:9,0:9:26.81:0,27,210	0/0:15,0:15:40.59:0,41,231	0/0:14,0:14:32.55:0,33,211	1/1:3,8:11:24.01:219,24,0	1/1:0,4:4:12.01:110,12,0	1/1:2,7:9:24.01:219,24,0	0/0:7,0:7:20.88:0,21,171	0/0:10,0:10:29.64:0,30,204	0/0:14,0:14:41.63:0,42,307	0/0:9,0:9:17.85:0,18,130	1/1:0,5:5:15.01:137,15,0	1/1:1,5:6:12:110,12,0	1/1:0,8:8:18.01:165,18,0	1/1:2,11:13:27.01:247,27,0	1/1:4,10:15:37.99:325,38,0	1/1:1,11:13:29.04:253,29,0	0/0:12,0:12:24.07:0,24,277	0/0:10,0:10:29.48:0,29,204	0/0:8,0:8:23.75:0,24,174	0/0:2,0:2:5.93:0,6,40
chr10	10157885	.	CAAAA	C	1891.70	PASS	AB=0.617;AC=18;AF=0.321;AN=56;BaseQRankSum=6.442;DP=477;FS=4.312;HRun=17;HaplotypeScore=87.1085;InbreedingCoeff=0.6867;MQ=77.17;MQ0=1;MQRankSum=-0.866;QD=11.46;ReadPosRankSum=7.245;VQSLOD=-0.1568;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,19:22:40.24:497,40,0	0/0:3,0:5:12.04:0,12,207	0/0:23,0:19:26.49:0,26,362	0/0:15,0:14:15.04:0,15,217	0/0:10,0:32:78.12:0,78,964	0/0:5,0:14:26.92:0,27,312	0/0:3,0:12:22.23:0,22,260	0/1:7,0:16:6.34:6,0,15	0/0:13,0:17:30.10:0,30,557	0/0:17,0:19:46.40:0,46,876	0/0:21,0:24:54.17:0,54,1042	1/1:1,8:10:18.03:213,18,0	1/1:3,8:11:15.75:224,16,0	1/1:4,9:13:5.88:109,6,0	0/0:13,0:15:33.11:0,33,654	0/0:21,0:24:57.07:0,57,960	0/0:14,0:18:48.14:0,48,873	0/0:21,0:24:54.11:0,54,1018	0/1:8,0:18:4.06:4,0,40	0/1:10,1:22:44.80:55,0,45	0/1:1,0:7:5.49:5,0,28	1/1:4,14:19:40.16:497,40,0	1/1:7,10:19:23.74:337,24,0	1/1:2,5:8:11.99:137,12,0	0/0:3,0:15:27.79:0,28,219	0/0:21,0:22:51.16:0,51,961	0/0:20,0:20:45.14:0,45,877	0/0:9,0:9:15.05:0,15,333
chr10	10159349	.	TACACACAC	T	3722.30	PASS	AB=0.693;AC=37;AF=0.685;AN=54;BaseQRankSum=3.665;DP=671;FS=0.000;HRun=0;HaplotypeScore=239.3998;InbreedingCoeff=0.3423;MQ=55.81;MQ0=25;MQRankSum=-2.729;QD=6.83;ReadPosRankSum=2.133;VQSLOD=2.3613;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:20,0:31:0:0,0,0	1/1:3,9:12:5.91:115,6,0	./.	0/0:47,0:16:12.04:0,12,204	0/0:16,0:17:36.12:0,36,1256	1/1:12,1:25:9.03:215,9,0	0/1:20,1:36:8.70:99,0,9	0/1:31,0:26:36.46:36,0,145	0/1:16,13:29:0:0,0,0	1/1:7,10:17:26.67:630,27,0	1/1:9,18:26:2.62:76,3,0	1/1:10,0:33:11.23:182,11,0	1/1:8,0:23:8.78:121,9,0	0/1:10,0:26:8.96:50,0,9	0/1:9,18:28:0.09:0,0,0	1/1:8,17:25:2.90:76,3,0	1/1:9,17:24:11.70:295,12,0	0/1:4,6:11:26.89:120,0,27	1/1:13,0:16:11.48:141,11,0	0/1:3,0:18:0.03:0,0,0	1/1:34,0:34:5.65:142,6,0	1/1:7,0:34:2.27:10,2,0	0/0:4,0:15:1.51:0,2,4	0/1:13,0:20:0.01:0,0,0	0/0:20,0:23:45.15:0,45,1552	1/1:8,9:18:33.10:750,33,0	1/1:8,8:15:24.06:524,24,0	1/1:4,0:6:6.02:140,6,0
chr10	10164026	.	AC	A	2485.99	PASS	AB=0.666;AC=43;AF=0.768;AN=56;BaseQRankSum=6.228;DP=352;FS=7.292;HRun=2;HaplotypeScore=175.5286;InbreedingCoeff=-0.1656;MQ=77.06;MQ0=0;MQRankSum=-0.029;QD=7.25;ReadPosRankSum=8.450;VQSLOD=0.3546;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:2,3:5:10.81:11,0,18	0/0:2,7:9:0.60:0,1,36	0/1:21,0:21:0.17:406,0,0	0/1:24,0:24:34.71:442,0,35	1/1:1,10:11:18.32:79,18,0	1/1:0,13:13:26.71:115,27,0	0/1:2,11:13:14.16:53,0,14	0/1:8,4:12:17.24:17,0,102	1/1:1,14:15:15.32:114,15,0	0/1:3,17:20:12.71:89,0,13	1/1:1,6:7:11.08:51,11,0	0/1:3,14:17:40.02:76,0,40	1/1:0,7:7:15.65:67,16,0	0/1:7,10:17:67.78:68,0,79	1/1:2,13:15:11.04:102,11,0	1/1:1,13:14:14.74:123,15,0	1/1:3,7:10:0.78:53,1,0	1/1:2,10:12:5.05:64,5,0	0/1:4,7:11:48.26:52,0,48	0/1:2,10:12:0.33:79,0,0	1/1:2,12:14:12.46:98,12,0	1/1:1,8:9:17.04:76,17,0	1/1:3,9:12:19.73:76,20,0	1/1:4,11:15:2.80:63,3,0	1/1:1,11:12:14.33:72,14,0	0/1:2,13:15:2.73:96,0,3	1/1:0,8:8:17.77:73,18,0	1/1:0,2:2:3.63:10,4,0
chr10	10178519	.	T	TACACACACAA	19085.98	PASS	AB=1.000;AC=49;AF=0.875;AN=56;BaseQRankSum=1.179;DP=902;FS=0.662;HRun=0;HaplotypeScore=246.3199;InbreedingCoeff=0.7512;MQ=39.53;MQ0=67;MQRankSum=-3.159;QD=24.22;ReadPosRankSum=-2.638;VQSLOD=3.3888;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:23,3:24:2.83:525,3,0	1/1:8,6:13:12.88:312,13,0	0/0:65,0:11:21.04:0,21,291	0/1:62,0:15:22.28:22,0,86	0/0:31,0:30:46.74:0,47,1186	1/1:5,20:29:29.85:626,30,0	1/1:28,1:26:41.94:639,42,0	1/1:39,0:27:39.01:780,39,0	1/1:35,10:40:89.78:2264,90,0	1/1:34,3:34:63.17:2022,63,0	1/1:19,4:22:29.73:390,30,0	1/1:26,5:27:62.72:1125,63,0	1/1:27,6:30:47.90:1127,48,0	1/1:26,3:26:44.92:865,45,0	1/1:31,6:36:83.48:1075,83,0	1/1:11,13:27:14.35:728,14,0	1/1:17,4:16:27.01:636,27,0	1/1:11,14:24:11.96:232,12,0	1/1:27,0:18:29.99:613,30,0	1/1:22,5:24:40.28:703,40,0	1/1:57,2:51:55.57:514,56,0	1/1:26,7:31:56.46:513,56,0	1/1:12,18:30:23.78:367,24,0	1/1:23,4:25:24.83:322,25,0	0/0:18,0:18:34.32:0,34,819	1/1:37,5:37:73.89:1917,74,0	1/1:6,11:21:15.94:709,16,0	1/1:6,0:6:8.90:60,9,0
chr10	10178599	.	AAC	A	1295.68	PASS	AB=0.942;AC=26;AF=0.500;AN=52;BaseQRankSum=3.928;DP=751;FS=1.361;HRun=0;HaplotypeScore=173.9548;InbreedingCoeff=0.2294;MQ=44.11;MQ0=36;MQRankSum=2.187;QD=2.72;ReadPosRankSum=-0.922;VQSLOD=2.4669;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:39,3:41:8.98:98,9,0	0/0:7,1:7:3.01:0,3,34	./.	./.	1/1:14,3:16:5.21:41,5,0	0/0:15,0:15:9.43:0,9,108	0/1:34,1:34:11.97:12,0,189	1/1:31,0:29:2.74:12,3,0	0/1:21,0:21:14.47:14,0,206	0/0:21,0:20:18.44:0,18,192	0/1:22,1:21:23.91:24,0,81	1/1:21,5:27:22.98:206,23,0	1/1:26,1:28:26.36:247,26,0	1/1:19,4:20:23.93:243,24,0	0/0:33,1:35:21.05:0,21,281	0/1:19,1:20:36.56:37,0,288	0/0:29,2:24:5.41:0,5,442	0/1:19,1:19:3.08:3,0,319	1/1:17,0:16:8.52:42,9,0	0/0:19,0:19:0:0,0,0	0/1:63,0:64:24.50:25,0,35	0/1:15,3:18:32.82:86,0,33	1/1:18,0:16:2.94:20,3,0	1/1:29,6:41:40.12:343,40,0	0/0:12,0:12:2.90:0,3,44	0/0:29,0:28:28.86:0,29,328	0/0:17,0:17:24:0,24,250	0/1:11,1:12:11.78:12,0,224
chr10	10178926	.	GTGTATATATGTATATA	G	10907.95	PASS	AB=0.686;AC=26;AF=0.481;AN=54;BaseQRankSum=0.389;DP=673;FS=0.491;HRun=0;HaplotypeScore=278.7530;InbreedingCoeff=0.8345;MQ=53.10;MQ0=2;MQRankSum=-5.090;QD=31.80;ReadPosRankSum=3.108;VQSLOD=3.4785;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:30:33.11:0,33,613	1/1:3,6:9:15.05:648,15,0	./.	0/0:13,0:7:5.81:0,6,148	0/0:30,0:30:69.24:0,69,4343	1/1:12,17:29:33.11:1124,33,0	1/1:12,9:21:3.01:125,3,0	0/0:34,0:34:27.09:0,27,555	1/1:14,23:37:27.09:1091,27,0	1/1:11,19:30:51.14:1793,51,0	1/1:7,16:23:20.99:645,21,0	0/0:8,0:25:42.13:0,42,696	0/0:11,0:28:42.14:0,42,735	0/0:10,0:23:27.07:0,27,421	1/1:6,17:23:21.06:764,21,0	1/1:10,18:28:21.07:873,21,0	1/1:16,12:28:9.03:382,9,0	1/1:9,11:20:12.04:518,12,0	0/0:17,0:23:24.08:0,24,419	0/0:18,0:37:51.17:0,51,917	0/1:12,0:19:0:0,0,0	0/0:9,0:19:24.08:0,24,404	0/0:10,0:18:6.02:0,6,97	0/0:9,0:13:3.01:0,3,69	0/0:27,0:27:57.20:0,57,3049	0/1:15,18:34:0.70:1535,0,1	1/1:10,19:29:18.06:764,18,0	1/1:6,7:12:15.05:646,15,0
chr10	10184015	.	GT	G	5657.87	PASS	AB=0.549;AC=47;AF=0.839;AN=56;BaseQRankSum=5.635;DP=616;FS=0.000;HRun=13;HaplotypeScore=85.3310;InbreedingCoeff=0.8201;MQ=69.80;MQ0=4;MQRankSum=-1.943;QD=10.27;ReadPosRankSum=3.180;VQSLOD=4.4996;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,0:24:42.77:124,43,0	1/1:2,10:13:28.79:195,29,0	0/0:13,0:10:13.32:0,13,108	0/0:9,0:7:5.96:0,6,47	0/0:19,0:20:44.03:0,44,446	1/1:3,18:22:26.51:345,27,0	1/1:3,19:22:44.74:328,45,0	1/1:7,1:41:65.66:194,66,0	1/1:5,10:15:20.83:153,21,0	1/1:5,21:27:38.47:435,38,0	0/1:5,21:28:22.72:335,0,23	1/1:1,0:16:28.84:85,29,0	1/1:7,1:25:35.56:116,36,0	1/1:1,0:22:38.70:112,39,0	1/1:2,21:23:56.66:416,57,0	1/1:5,20:26:49.71:356,50,0	1/1:3,18:21:47.72:350,48,0	1/1:6,20:26:56.51:416,57,0	1/1:4,0:21:31.88:91,32,0	1/1:4,2:29:53.52:185,54,0	1/1:3,0:13:16.29:47,16,0	1/1:2,0:23:35.08:101,35,0	1/1:1,0:23:40.73:118,41,0	1/1:4,0:24:40.72:118,41,0	0/0:23,0:23:42.44:0,42,517	1/1:6,24:30:71.54:525,72,0	1/1:3,23:28:60.72:428,61,0	1/1:0,5:5:11.92:88,12,0
chr10	10184406	.	T	TA	1234.61	PASS	AB=0.963;AC=7;AF=0.125;AN=56;BaseQRankSum=-5.528;DP=622;FS=4.364;HRun=9;HaplotypeScore=60.9332;InbreedingCoeff=0.8055;MQ=65.73;MQ0=1;MQRankSum=1.879;QD=13.57;ReadPosRankSum=1.490;VQSLOD=3.5528;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:68.95:0,69,590	0/0:9,0:9:23.99:0,24,208	0/0:23,0:7:5.95:0,6,46	0/1:25,0:18:9.33:9,0,17	0/0:37,1:38:59.45:0,59,739	1/1:2,21:23:31.11:571,31,0	1/1:3,17:20:10.04:339,10,0	0/0:28,0:28:74.78:0,75,638	1/1:3,19:22:42.11:458,42,0	0/0:20,0:20:26.54:0,27,364	0/0:19,0:19:19.87:0,20,353	0/0:19,0:19:44.98:0,45,390	0/0:23,0:23:59.97:0,60,516	0/0:23,0:23:53.98:0,54,468	0/0:27,0:27:65.99:0,66,573	0/0:22,0:23:56.02:0,56,475	0/0:27,0:27:65.94:0,66,565	0/0:16,0:16:35.98:0,36,308	0/0:28,0:28:68.96:0,69,598	0/0:35,0:35:92.94:0,93,800	0/0:18,0:18:47.99:0,48,417	0/0:20,0:20:41.99:0,42,365	0/0:19,1:21:25.83:0,26,438	0/0:15,0:15:26.98:0,27,234	0/0:18,0:18:53.99:0,54,468	0/0:24,0:24:62.97:0,63,542	0/0:20,0:20:53.98:0,54,469	0/0:8,0:8:24:0,24,208
chr10	10185640	.	TGCGTGCGTGCGTGC	T	344.77	PASS	AB=1.000;AC=7;AF=0.206;AN=34;BaseQRankSum=4.093;DP=221;FS=5.093;HRun=0;HaplotypeScore=94.3543;InbreedingCoeff=0.1895;MQ=44.26;MQ0=28;MQRankSum=-0.941;QD=5.00;ReadPosRankSum=-2.410;VQSLOD=1.0704;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	0/0:3,0:2:3.48:0,3,81	./.	./.	1/1:2,10:12:3.01:71,3,0	0/0:12,0:10:20.71:0,21,286	0/0:27,0:24:16.67:0,17,667	./.	0/0:13,0:13:18.90:0,19,512	0/0:11,0:7:4.23:0,4,287	0/0:5,0:5:12.04:0,12,317	./.	0/0:1,0:1:3.01:0,3,74	./.	0/0:10,0:8:8.07:0,8,246	0/0:11,0:11:19.57:0,20,743	0/0:22,0:22:23.21:0,23,834	0/1:19,0:18:14.30:14,0,837	./.	./.	0/0:6,0:2:3.01:0,3,112	./.	./.	./.	1/1:15,0:15:8.41:276,8,0	0/1:14,0:10:47.48:47,0,228	0/1:9,0:7:47.12:47,0,198	0/0:5,0:4:11.83:0,12,235
chr10	10185654	.	CGT	C	723.81	PASS	AB=0.893;AC=18;AF=0.360;AN=50;BaseQRankSum=4.593;DP=350;FS=25.351;HRun=0;HaplotypeScore=76.3647;InbreedingCoeff=0.3736;MQ=42.56;MQ0=36;MQRankSum=0.713;QD=3.83;ReadPosRankSum=3.797;VQSLOD=0.5808;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:16:13.10:0,13,118	0/0:3,0:3:2.37:0,2,8	./.	./.	0/0:13,0:13:2.92:0,3,17	0/0:11,0:8:9.44:0,9,128	0/1:34,2:33:20.46:20,0,490	0/0:10,0:10:20.82:0,21,127	0/0:13,0:13:8.80:0,9,84	0/1:11,2:10:6.54:27,0,7	./.	1/1:11,0:9:0.55:2,1,0	0/0:4,0:4:2.50:0,2,9	0/0:5,0:5:2.37:0,2,8	1/1:7,6:11:0.48:91,0,0	1/1:9,6:13:8.92:79,9,0	1/1:17,11:28:12.66:304,13,0	0/1:15,7:21:10.69:122,0,11	0/0:6,0:5:7.88:0,8,46	0/0:14,0:12:14.94:0,15,125	0/0:10,0:6:9:0,9,86	0/0:9,0:6:4.21:0,4,27	0/0:22,0:19:5.87:0,6,44	0/0:16,0:14:11.24:0,11,62	0/1:15,0:15:3.82:4,0,46	1/1:14,4:14:8.96:82,9,0	1/1:5,0:8:3:29,3,0	1/1:5,3:7:12.45:116,12,0
chr10	10190906	.	C	CCTCTCTCTCTCTCTCT	6290.61	PASS	AB=0.761;AC=42;AF=0.808;AN=52;BaseQRankSum=0.362;DP=570;FS=22.707;HRun=0;HaplotypeScore=196.2432;InbreedingCoeff=0.4606;MQ=61.62;MQ0=6;MQRankSum=-2.058;QD=13.59;ReadPosRankSum=-0.782;VQSLOD=2.1913;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:22,2:26:3.01:39,3,0	1/1:10,0:10:3.23:23,3,0	0/0:38,0:20:6.49:0,6,175	0/0:41,0:21:9.10:0,9,417	1/1:16,5:21:3.01:35,3,0	1/1:10,0:11:6.02:371,6,0	1/1:16,0:16:2.81:75,3,0	1/1:39,0:38:29.07:450,29,0	1/1:13,0:15:6.02:288,6,0	1/1:23,0:23:34.92:1445,35,0	./.	./.	1/1:11,0:14:7.43:385,7,0	1/1:12,0:10:6.01:125,6,0	0/1:14,9:21:0.04:0,0,0	1/1:12,6:18:0.47:1,0,0	1/1:16,0:15:13.59:367,14,0	1/1:12,0:11:14.84:491,15,0	1/1:23,0:22:20.50:298,20,0	1/1:21,0:20:17.98:348,18,0	0/1:11,2:13:0:0,0,0	0/1:15,0:22:0.02:1,0,0	0/1:12,10:22:0:0,0,0	0/1:14,0:20:0:0,0,0	0/1:20,0:27:0:1,0,0	1/1:25,1:23:34.64:1150,35,0	1/1:14,0:17:6.49:395,6,0	1/1:5,0:5:1.25:3,1,0
chr10	10190953	.	GTA	G	2538.67	PASS	AB=1.000;AC=46;AF=0.821;AN=56;BaseQRankSum=-1.001;DP=497;FS=6.582;HRun=0;HaplotypeScore=112.0748;InbreedingCoeff=0.1228;MQ=45.58;MQ0=17;MQRankSum=0.786;QD=5.74;ReadPosRankSum=-3.032;VQSLOD=2.0930;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:17:5.41:39,5,0	1/1:4,0:2:2.78:18,3,0	0/1:33,0:9:11.35:11,0,60	0/1:42,0:14:5.53:6,0,87	0/0:22,0:22:18.45:0,18,159	1/1:12,0:10:14.53:110,15,0	1/1:20,1:21:31.58:283,32,0	1/1:25,1:25:57.43:412,57,0	1/1:18,0:18:23.95:216,24,0	1/1:20,0:18:5.46:182,5,0	1/1:6,0:5:3.47:25,3,0	1/1:17,0:17:6.45:48,6,0	1/1:15,0:15:17.06:129,17,0	1/1:9,0:7:7.88:70,8,0	1/1:17,0:15:11.96:97,12,0	1/1:16,0:15:6.41:43,6,0	1/1:10,0:10:2.97:52,3,0	0/1:7,0:7:6.96:62,0,7	1/1:19,1:18:1.02:215,1,0	0/1:23,0:22:17.64:68,0,18	1/1:20,0:20:14.99:144,15,0	1/1:16,0:15:11.97:96,12,0	1/1:14,0:14:5.03:31,5,0	1/1:24,0:24:18.63:161,19,0	0/0:32,1:33:3.09:0,3,246	0/1:21,0:19:13.04:142,0,13	0/1:12,0:12:20:23,0,20	1/1:1,0:1:0.47:1,0,0
chr10	10191320	.	GC	G	10481.32	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=19.510;DP=730;FS=7.831;HRun=2;HaplotypeScore=100.5273;InbreedingCoeff=0.9994;MQ=88.19;MQ0=0;MQRankSum=-3.108;QD=33.27;ReadPosRankSum=2.493;VQSLOD=4.4723;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,58:59:99:1933,157,0	0/0:12,0:12:36.12:0,36,538	0/0:24,0:24:69.23:0,69,1034	0/0:28,0:28:75.25:0,75,1088	0/0:21,0:21:60.18:0,60,848	0/0:26,0:26:75.25:0,75,1124	0/0:24,0:24:72.24:0,72,1077	1/1:5,16:20:54.63:655,55,0	0/0:37,0:37:99:0,111,1662	0/0:24,0:24:69.02:0,69,1001	0/0:14,0:14:42.12:0,42,607	1/1:0,30:30:87.27:1080,87,0	1/1:0,17:17:48.15:589,48,0	1/1:1,21:22:60.19:737,60,0	0/0:35,0:35:99:0,105,1553	0/0:35,0:35:99:0,105,1552	0/0:28,0:28:78.26:0,78,1168	0/0:26,0:26:78.26:0,78,1167	1/1:1,24:25:73.76:875,74,0	1/1:0,24:24:66.08:765,66,0	1/1:0,34:34:99:1228,99,0	1/1:1,17:18:47.05:572,47,0	1/1:1,15:16:42.06:488,42,0	1/1:2,47:49:99:1559,125,0	0/0:28,0:28:81.26:0,81,1195	0/0:20,0:20:60.20:0,60,898	0/0:26,0:26:78.26:0,78,1163	0/0:7,0:7:21.06:0,21,296
chr10	10193300	.	GT	G	12447.28	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=4.898;DP=542;FS=1.293;HRun=8;HaplotypeScore=65.8481;InbreedingCoeff=0.9720;MQ=74.34;MQ0=0;MQRankSum=-3.874;QD=25.25;ReadPosRankSum=1.590;VQSLOD=5.7101;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,42:43:99:1072,111,0	1/1:0,7:7:21.03:203,21,0	0/0:7,1:8:18.48:0,18,199	0/0:9,0:9:14.88:0,15,144	0/0:19,0:19:48.14:0,48,575	1/1:3,31:34:87.14:840,87,0	1/1:1,20:21:54.09:521,54,0	1/1:3,31:34:93.10:885,93,0	1/1:1,13:14:39.06:377,39,0	1/1:1,18:19:54.07:516,54,0	1/1:3,6:9:18.03:174,18,0	1/1:1,18:19:51.08:492,51,0	1/1:2,10:12:21.03:203,21,0	1/1:1,13:14:39.06:377,39,0	1/1:0,11:12:36.05:345,36,0	1/1:0,17:17:48.08:464,48,0	1/1:2,38:40:99:1014,105,0	1/1:4,24:28:66.10:637,66,0	1/1:4,26:30:78.12:753,78,0	1/1:0,11:11:30:280,30,0	1/1:3,31:34:93.15:898,93,0	1/1:2,8:10:24.03:232,24,0	1/1:0,12:12:36.06:347,36,0	1/1:1,24:25:60.10:579,60,0	0/0:13,0:13:39.12:0,39,471	1/1:0,24:24:72.10:689,72,0	1/1:3,17:20:48.08:463,48,0	1/1:1,3:4:9.01:87,9,0
chr10	10193687	.	AC	A	5436	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-9.258;DP=463;FS=5.171;HRun=8;HaplotypeScore=66.5794;InbreedingCoeff=0.8782;MQ=85.90;MQ0=0;MQRankSum=-3.139;QD=23.53;ReadPosRankSum=4.173;VQSLOD=5.6628;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:27:28.83:0,29,154	1/1:0,5:5:15.02:145,15,0	0/0:16,1:17:33.09:0,33,385	0/0:20,0:20:51.13:0,51,595	0/0:7,0:7:18.04:0,18,206	1/1:4,18:22:54.09:521,54,0	1/1:4,38:42:81.12:782,81,0	0/0:12,0:20:15.06:0,15,161	1/1:3,15:18:42.06:405,42,0	1/1:5,13:18:42.06:405,42,0	1/1:0,2:2:6.01:58,6,0	0/0:4,0:15:5.71:0,6,85	0/0:6,0:12:23.33:0,23,137	0/0:3,0:19:16.57:0,17,86	1/1:1,25:26:63.10:608,63,0	1/1:1,13:14:36.06:348,36,0	1/1:1,22:23:63.10:608,63,0	1/1:1,20:21:57.07:550,57,0	0/0:8,0:13:15.07:0,15,84	0/0:2,0:5:0.36:0,0,21	0/0:6,0:27:30.23:0,30,168	0/0:4,0:9:1.25:0,1,39	0/0:6,0:8:8.54:0,9,38	0/0:12,0:27:60.47:0,60,312	0/0:6,0:6:9.03:0,9,109	1/1:3,18:21:57.07:543,57,0	1/1:3,9:12:30.05:289,30,0	1/1:1,6:7:18.03:174,18,0
chr10	10194630	.	GT	G	2768.29	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=12.940;DP=429;FS=1.308;HRun=1;HaplotypeScore=70.6769;InbreedingCoeff=0.9888;MQ=77.74;MQ0=0;MQRankSum=-4.859;QD=17.41;ReadPosRankSum=-2.057;VQSLOD=3.2802;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,19:24:48.87:447,49,0	0/0:14,0:14:39.08:0,39,496	0/0:15,1:15:37.05:0,37,526	0/0:14,0:14:20.28:0,20,349	0/0:17,0:17:51.17:0,51,724	0/0:14,0:14:39.11:0,39,535	0/0:28,0:28:84.13:0,84,1067	1/1:8,6:14:29.82:232,30,0	0/0:9,0:9:27.08:0,27,362	0/0:17,0:17:45.14:0,45,626	0/0:10,0:10:27.01:0,27,342	1/1:4,7:11:29.54:217,30,0	1/1:7,5:12:35.82:279,36,0	1/1:3,17:20:59.64:476,60,0	0/0:12,0:12:36.07:0,36,456	0/0:17,0:17:51.14:0,51,677	0/0:22,0:22:56.43:0,56,849	0/0:19,0:19:57.18:0,57,795	1/1:3,4:7:15.87:133,16,0	1/1:0,16:16:41.67:319,42,0	1/1:7,10:17:33.45:289,33,0	1/1:0,11:11:14.92:127,15,0	1/1:0,10:10:17.72:148,18,0	1/1:6,10:16:38.91:325,39,0	0/0:14,0:14:36.12:0,36,512	0/0:20,0:20:54.11:0,54,716	0/0:23,0:23:69.22:0,69,959	0/0:4,0:4:12.04:0,12,171
chr10	10194634	.	GGA	G	3994.25	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=13.057;DP=443;FS=1.314;HRun=0;HaplotypeScore=75.1464;InbreedingCoeff=0.9328;MQ=80.50;MQ0=0;MQRankSum=-4.349;QD=23.09;ReadPosRankSum=-1.208;VQSLOD=3.2608;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:23,3:25:52.96:627,53,0	0/0:15,0:15:45.14:0,45,777	0/0:18,0:17:36.10:0,36,671	0/1:16,0:16:6.01:6,0,510	0/0:18,0:18:51.17:0,51,924	0/0:15,0:15:42.14:0,42,759	0/0:27,0:27:78.23:0,78,1363	1/1:13,0:13:23.93:243,24,0	0/0:8,0:8:24.06:0,24,408	0/0:17,0:17:51.17:0,51,910	0/0:11,0:11:33.09:0,33,543	1/1:13,1:14:25.88:305,26,0	1/1:11,0:11:27.52:309,28,0	1/1:16,3:19:54.15:684,54,0	0/0:11,0:11:33.11:0,33,604	0/0:18,0:18:54.19:0,54,984	0/0:24,0:24:70.06:0,70,1169	0/0:22,0:22:66.20:0,66,1128	1/1:7,1:8:19.86:214,20,0	1/1:14,1:15:34.72:376,35,0	1/1:15,1:16:26.74:329,27,0	1/1:11,1:12:20.81:236,21,0	1/1:7,1:8:18.03:224,18,0	1/1:15,0:15:39.02:440,39,0	0/0:15,0:15:45.13:0,45,761	0/0:24,0:24:72.23:0,72,1234	0/0:23,0:23:69.22:0,69,1217	0/0:4,0:4:12.04:0,12,210
chr10	10194635	.	GA	G	2627.49	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=13.241;DP=444;FS=0.820;HRun=1;HaplotypeScore=70.8294;InbreedingCoeff=0.9800;MQ=79.62;MQ0=0;MQRankSum=-3.361;QD=16.63;ReadPosRankSum=-1.996;VQSLOD=3.1738;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,15:27:35.71:460,36,0	0/0:15,0:15:45.12:0,45,651	0/0:16,1:16:39.02:0,39,629	0/0:16,0:16:7.20:0,7,419	0/0:18,0:18:54.15:0,54,800	0/0:15,0:15:42.13:0,42,635	0/0:26,0:26:78.25:0,78,1194	1/1:6,6:12:27.23:201,27,0	0/0:8,0:8:24.08:0,24,375	0/0:17,0:17:51.16:0,51,758	0/0:11,0:11:33.09:0,33,476	1/1:7,5:14:32.90:222,33,0	1/1:7,5:12:30.73:238,31,0	1/1:5,14:19:54.48:411,54,0	0/0:11,0:11:33.11:0,33,516	0/0:19,0:19:57.18:0,57,868	0/0:24,0:24:72.01:0,72,1021	0/0:23,0:23:66.16:0,66,944	1/1:4,3:7:18.44:156,18,0	1/1:6,9:15:37.88:287,38,0	1/1:7,9:16:27.46:236,27,0	1/1:6,5:11:20.90:167,21,0	1/1:3,5:8:17.91:144,18,0	1/1:5,10:16:41.83:332,42,0	0/0:15,0:15:45.13:0,45,658	0/0:24,0:24:72.21:0,72,1044	0/0:23,0:23:69.23:0,69,1075	0/0:4,0:4:12.04:0,12,175
chr10	10196567	.	G	GT	11524.30	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-12.741;DP=656;FS=0.956;HRun=1;HaplotypeScore=68.6587;InbreedingCoeff=0.9950;MQ=91.38;MQ0=0;MQRankSum=-3.316;QD=41.31;ReadPosRankSum=2.152;VQSLOD=5.4878;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,35:35:99:1528,102,0	0/0:5,0:5:12.04:0,12,156	0/0:22,0:22:50.75:0,51,651	0/0:34,0:34:77.13:0,77,971	0/0:23,0:23:69.22:0,69,895	0/0:18,0:18:51.17:0,51,662	0/0:41,0:41:99:0,120,1558	1/1:2,23:25:69.23:1033,69,0	0/0:23,0:23:69.22:0,69,895	0/0:22,0:22:66.21:0,66,857	0/0:11,0:11:33.11:0,33,428	1/1:1,24:26:66.18:964,66,0	1/1:0,19:19:54.18:809,54,0	1/1:3,30:33:90.26:1316,90,0	0/0:25,0:25:72.23:0,72,934	0/0:26,0:26:78.25:0,78,1013	0/0:31,0:31:93.28:0,93,1191	0/0:23,0:23:60.19:0,60,777	1/1:0,21:21:63.18:902,63,0	1/1:1,18:19:51.17:765,51,0	1/1:0,34:34:99:1484,99,0	1/1:0,26:26:72.24:1079,72,0	1/1:2,15:17:51.17:745,51,0	1/1:0,24:24:60.20:899,60,0	0/0:22,0:22:66.21:0,66,856	0/0:24,0:24:72.23:0,72,935	0/0:20,0:20:60.19:0,60,776	0/0:7,0:7:21.07:0,21,273
chr10	10196784	.	C	CAGAGAG	612.05	PASS	AB=0.967;AC=14;AF=0.269;AN=52;BaseQRankSum=4.048;DP=623;FS=10.960;HRun=0;HaplotypeScore=180.4628;InbreedingCoeff=-0.2209;MQ=42.60;MQ0=27;MQRankSum=-5.110;QD=2.07;ReadPosRankSum=3.307;VQSLOD=1.6015;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,3:34:23.56:0,24,327	1/1:9,0:9:2.56:31,3,0	0/0:8,0:4:9.03:0,9,207	0/0:14,0:12:33.08:0,33,680	0/0:30,0:28:54.17:0,54,1164	0/0:13,0:13:8.51:0,9,108	0/0:30,0:30:15.05:0,15,351	0/1:47,0:26:49.96:50,0,934	0/1:22,0:22:9.69:10,0,382	0/0:31,0:26:24.22:0,24,822	./.	0/1:10,1:12:45.30:67,0,45	0/1:14,0:15:99:165,0,295	0/0:20,2:22:15.93:0,16,229	0/1:24,0:23:17.73:18,0,212	0/0:15,0:15:9.03:0,9,165	0/1:32,0:31:49.07:49,0,899	0/1:22,0:22:5.51:6,0,527	0/1:15,2:13:99:282,0,283	0/1:17,1:18:25.11:25,0,121	0/0:36,0:29:6.49:0,6,125	./.	0/0:21,0:19:1.14:0,1,3	0/1:30,1:31:16.47:16,0,220	0/0:29,0:27:62.23:0,62,1316	0/1:35,0:33:30.41:30,0,1132	0/1:12,0:11:5.29:5,0,212	0/0:9,0:9:16.61:0,17,265
chr10	10196792	.	C	CAG	947.85	PASS	AB=0.950;AC=20;AF=0.370;AN=54;BaseQRankSum=7.591;DP=657;FS=0.000;HRun=0;HaplotypeScore=162.0106;InbreedingCoeff=0.4268;MQ=42.18;MQ0=28;MQRankSum=-1.598;QD=3.02;ReadPosRankSum=2.340;VQSLOD=2.4096;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:31,6:35:16.51:183,17,0	1/1:9,0:9:1.71:6,2,0	0/0:6,0:3:8.95:0,9,82	0/0:15,0:7:14.96:0,15,135	0/0:30,0:28:62.91:0,63,551	0/0:14,0:14:3.22:0,3,12	0/0:33,0:33:14.98:0,15,141	0/1:52,0:30:12.50:12,0,180	0/0:23,0:23:26.38:0,26,142	0/0:35,0:29:32.52:0,33,301	./.	1/1:10,1:11:14.70:140,15,0	1/1:14,0:14:17.06:176,17,0	1/1:16,7:23:10.34:171,10,0	0/1:23,0:22:2.66:3,0,7	0/0:18,0:18:8.21:0,8,49	0/0:36,0:35:14.93:0,15,264	0/0:23,0:23:41.34:0,41,277	0/1:14,5:17:81.19:136,0,81	0/1:19,1:20:24.21:85,0,24	0/1:37,0:30:26.22:31,0,26	0/0:6,17:21:0:0,0,0	1/1:16,5:19:5.95:42,6,0	1/1:27,5:32:14.61:120,15,0	0/0:32,0:29:45.98:0,46,608	0/0:35,0:33:12.76:0,13,247	0/1:14,0:12:20.02:20,0,63	0/0:9,0:9:17.85:0,18,101
chr10	10196794	.	C	CACACAG	5373.52	PASS	AB=0.986;AC=38;AF=0.679;AN=56;BaseQRankSum=-1.057;DP=676;FS=2.408;HRun=0;HaplotypeScore=181.8213;InbreedingCoeff=0.3130;MQ=43.20;MQ0=30;MQRankSum=-0.755;QD=9.95;ReadPosRankSum=1.399;VQSLOD=4.2069;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:34,0:33:1.85:29,0,2	1/1:2,6:9:2.85:104,3,0	0/0:7,0:2:5.93:0,6,40	0/0:16,0:7:3.01:0,3,41	0/0:30,0:28:51.53:0,52,514	1/1:0,11:16:2.01:45,2,0	0/0:10,19:37:3.01:0,3,69	0/1:54,0:32:6.27:221,0,6	1/1:19,4:23:38.62:640,39,0	1/1:15,0:32:45.67:790,46,0	0/0:3,6:13:0:0,0,0	1/1:11,0:11:1.17:36,1,0	0/1:13,0:13:28.35:53,0,28	1/1:22,0:22:3.95:15,4,0	1/1:5,16:24:5.92:128,6,0	1/1:4,13:20:3.01:40,3,0	1/1:31,2:34:0.15:586,0,0	1/1:20,3:23:20.47:728,20,0	1/1:22,0:18:3.09:213,3,0	1/1:19,0:20:18.42:139,18,0	0/1:31,0:27:1.26:35,0,1	0/1:22,0:20:0.04:0,0,0	1/1:21,0:19:5.48:43,5,0	0/1:34,0:34:5.68:51,0,6	0/0:32,0:30:45.35:0,45,748	1/1:15,18:38:48.82:959,49,0	1/1:11,1:12:14.66:246,15,0	1/1:9,0:9:20.95:273,21,0
chr10	10196806	.	G	GAC	2015.08	PASS	AB=0.982;AC=22;AF=0.393;AN=56;BaseQRankSum=1.505;DP=688;FS=1.714;HRun=0;HaplotypeScore=181.7456;InbreedingCoeff=0.4246;MQ=42.89;MQ0=32;MQRankSum=-3.156;QD=5.26;ReadPosRankSum=-2.306;VQSLOD=2.6863;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:33,2:34:9.95:140,10,0	0/0:11,0:11:8.28:0,8,81	0/0:10,0:3:8.94:0,9,78	0/0:15,0:5:13.17:0,13,102	0/0:27,0:26:54.11:0,54,616	0/0:19,0:19:5.59:0,6,47	0/0:32,0:32:6.02:0,6,72	0/1:50,0:34:88.79:490,0,89	0/0:22,0:22:12:0,12,318	0/0:35,0:29:33.72:0,34,493	0/0:15,0:15:9:0,9,98	1/1:9,4:13:14:157,14,0	1/1:10,2:12:11.87:138,12,0	1/1:21,3:24:4.51:50,5,0	0/1:26,0:25:5.20:5,0,27	0/0:18,0:18:5.91:0,6,73	0/0:34,0:33:61.68:0,62,645	0/0:23,0:23:45.27:0,45,436	0/1:21,2:17:28.66:231,0,29	1/1:19,1:20:30.03:405,30,0	1/1:38,0:30:11.86:179,12,0	1/1:23,0:21:8.95:116,9,0	1/1:21,1:20:5.99:92,6,0	0/1:32,1:33:45.94:99,0,46	0/0:33,0:30:43.17:0,43,513	0/1:45,0:43:53.84:54,0,641	0/1:15,0:13:48.56:49,0,108	0/0:10,0:10:18.04:0,18,204
chr10	10196926	.	TAC	T	1881.68	PASS	AB=0.846;AC=21;AF=0.375;AN=56;BaseQRankSum=7.595;DP=813;FS=6.805;HRun=0;HaplotypeScore=220.6759;InbreedingCoeff=0.8661;MQ=46.22;MQ0=35;MQRankSum=-6.097;QD=6.34;ReadPosRankSum=-4.115;VQSLOD=1.8997;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:21,5:24:5.11:106,5,0	0/0:3,0:3:3.01:0,3,52	0/0:42,0:10:18.06:0,18,309	0/0:52,0:13:23.86:0,24,327	0/0:32,0:32:96.20:0,96,1570	0/0:17,0:16:21.07:0,21,358	0/0:38,0:36:63.22:0,63,1072	1/1:44,8:33:35.01:565,35,0	0/0:32,0:32:48.16:0,48,796	0/0:48,0:47:99:0,138,2156	0/0:19,0:18:42.14:0,42,716	1/1:10,4:13:14.88:90,15,0	1/1:8,12:20:14.97:155,15,0	1/1:10,5:15:11.69:71,12,0	0/0:25,0:24:36.07:0,36,497	0/0:27,0:27:53.62:0,54,877	0/0:49,0:48:99:0,120,1927	0/0:30,0:29:55.66:0,56,1237	0/1:9,2:6:8.95:85,0,9	1/1:9,26:35:35.35:276,35,0	1/1:36,15:42:30.74:303,31,0	1/1:8,13:21:14.89:140,15,0	1/1:14,10:23:9.33:171,9,0	1/1:22,6:28:20.13:132,20,0	0/0:28,0:28:75.20:0,75,1184	0/0:32,0:30:69.19:0,69,1114	0/0:18,0:18:51.13:0,51,802	0/0:24,0:24:48.07:0,48,701
chr10	10196950	.	CAT	C	2907.69	PASS	AB=0.991;AC=44;AF=0.786;AN=56;BaseQRankSum=12.587;DP=757;FS=14.996;HRun=0;HaplotypeScore=216.7860;InbreedingCoeff=0.4392;MQ=50.11;MQ0=23;MQRankSum=-1.712;QD=4.76;ReadPosRankSum=4.577;VQSLOD=1.7305;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:23:3.10:8,3,0	1/1:6,0:6:2.80:13,3,0	0/0:40,1:10:19.94:0,20,185	0/0:46,0:11:23.03:0,23,175	0/0:31,0:31:90.13:0,90,1426	1/1:22,0:21:18.39:84,18,0	0/1:46,0:46:99:121,0,137	1/1:13,5:8:15.73:137,16,0	1/1:36,0:36:30.64:224,31,0	0/1:43,0:42:29.97:308,0,30	1/1:18,0:17:20.69:141,21,0	1/1:9,0:9:3.16:10,3,0	1/1:13,3:16:15.29:103,15,0	1/1:11,2:13:0.88:3,1,0	0/1:26,1:27:15.87:101,0,16	1/1:33,1:33:37.82:288,38,0	1/1:45,0:42:20.31:381,20,0	1/1:35,0:33:42.08:340,42,0	1/1:10,0:6:9.69:46,10,0	1/1:36,6:42:25.05:99,25,0	1/1:22,3:21:3.16:10,3,0	1/1:24,4:28:12.47:41,12,0	1/1:18,3:20:13.85:60,14,0	1/1:23,0:23:2.37:15,2,0	0/0:26,0:26:54.14:0,54,1085	1/1:29,0:27:36.57:246,37,0	1/1:21,0:20:11.64:153,12,0	0/1:20,0:20:11.37:147,0,11
chr10	10196952	.	TAC	T	8306.48	PASS	AB=1.000;AC=47;AF=0.839;AN=56;BaseQRankSum=5.816;DP=736;FS=7.402;HRun=0;HaplotypeScore=194.1561;InbreedingCoeff=0.7440;MQ=51.16;MQ0=20;MQRankSum=-0.318;QD=14.10;ReadPosRankSum=0.764;VQSLOD=3.8693;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:23:2.68:7,3,0	1/1:0,6:6:3.01:38,3,0	0/0:43,0:11:14.88:0,15,170	0/0:48,0:12:17.59:0,18,236	0/0:30,0:30:78.23:0,78,1205	1/1:1,21:21:21.01:248,21,0	1/1:10,37:47:42.13:535,42,0	1/1:18,0:8:11.99:129,12,0	1/1:6,27:33:39.12:496,39,0	1/1:7,34:40:96.22:1150,96,0	1/1:10,7:17:39.09:465,39,0	1/1:8,0:8:3.19:9,3,0	1/1:16,0:16:13.67:93,14,0	1/1:12,0:12:0.88:2,1,0	1/1:3,24:27:30.09:382,30,0	1/1:13,18:30:62.83:778,63,0	1/1:20,26:43:88.99:1077,89,0	1/1:17,18:33:46.34:952,46,0	1/1:9,0:5:8.45:43,8,0	1/1:39,0:39:22.55:94,23,0	1/1:24,0:20:2.04:6,2,0	1/1:27,0:27:12.06:40,12,0	1/1:18,0:18:9.01:40,9,0	0/1:20,0:20:0.01:0,0,0	0/0:26,0:26:54.16:0,54,832	1/1:19,10:27:74.87:838,75,0	1/1:14,6:20:47.84:505,48,0	1/1:2,17:19:30.10:381,30,0
chr10	10196982	.	A	AC	38.97	PASS	AB=0.827;AC=15;AF=0.268;AN=56;BaseQRankSum=8.408;DP=722;FS=0.675;HRun=0;HaplotypeScore=236.4214;InbreedingCoeff=0.3676;MQ=57.84;MQ0=13;MQRankSum=-9.106;QD=0.20;ReadPosRankSum=-1.926;VQSLOD=2.3613;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:22,3:23:1.26:5,0,1	0/0:8,0:8:17.98:0,18,208	0/0:51,0:22:47.84:0,48,582	0/0:60,0:27:60.55:0,61,706	0/0:27,0:27:78.25:0,78,1074	0/0:25,0:24:47.85:0,48,536	0/0:45,0:45:84.25:0,84,1148	0/1:8,8:3:18.16:38,0,18	0/0:37,0:37:81.13:0,81,1038	0/0:40,0:39:99:0,104,1400	0/0:13,0:13:38.98:0,39,492	1/1:7,4:11:5.97:28,6,0	0/1:9,4:13:18.14:18,0,28	0/1:11,5:16:3.38:3,0,31	0/0:31,0:31:69.05:0,69,907	0/0:35,0:33:92.28:0,92,1139	0/0:41,0:38:99:0,108,1407	0/0:38,0:36:99:0,102,1355	0/1:9,1:7:21.55:30,0,22	0/1:22,1:23:16.48:16,0,34	1/1:15,2:14:0.37:4,0,0	1/1:21,6:27:4.17:20,4,0	1/1:21,4:25:7.83:21,8,0	0/1:8,2:10:0.27:1,0,0	0/0:15,0:15:42.14:0,42,584	0/0:30,0:28:75.24:0,75,1035	0/0:15,0:14:42.10:0,42,561	0/0:18,0:18:48.16:0,48,671
chr10	10197006	.	GAC	G	2682.49	PASS	AB=0.643;AC=19;AF=0.339;AN=56;BaseQRankSum=4.364;DP=731;FS=21.321;HRun=0;HaplotypeScore=249.8057;InbreedingCoeff=0.8212;MQ=52.83;MQ0=11;MQRankSum=-9.424;QD=11.18;ReadPosRankSum=-8.717;VQSLOD=0.2469;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:9,13:21:0.48:69,0,0	0/0:9,0:9:18:0,18,306	0/0:35,0:15:21.05:0,21,328	0/0:50,0:21:18.92:0,19,281	0/0:31,0:31:72.24:0,72,1209	0/0:26,0:25:27.09:0,27,459	0/0:47,0:47:51.17:0,51,863	1/1:25,13:27:78.23:985,78,0	0/0:35,0:35:51.16:0,51,823	0/0:32,0:32:70.05:0,70,1083	0/0:11,0:11:21.07:0,21,357	1/1:1,18:19:36.48:440,36,0	1/1:5,8:13:14.92:153,15,0	1/1:1,17:18:15.25:332,15,0	0/0:33,0:33:57.18:0,57,937	0/0:34,0:32:51.17:0,51,861	0/0:30,0:27:63.21:0,63,1040	0/0:30,0:29:78.27:0,78,1297	0/1:8,7:12:25.72:248,0,26	1/1:8,14:22:18.06:233,18,0	1/1:23,4:22:6.70:72,7,0	1/1:4,20:24:11.47:155,11,0	1/1:8,21:29:14.96:194,15,0	0/1:5,8:13:0:0,0,0	0/0:21,0:21:51.17:0,51,848	0/0:32,0:30:81.16:0,81,1236	0/0:17,0:16:42.14:0,42,687	0/0:17,0:17:42.12:0,42,658
chr10	10197036	.	TACACACACAGAC	T	8527.18	PASS	AB=1.000;AC=42;AF=0.778;AN=54;BaseQRankSum=1.670;DP=713;FS=2.980;HRun=0;HaplotypeScore=319.7302;InbreedingCoeff=0.3483;MQ=42.64;MQ0=25;MQRankSum=-1.629;QD=14.73;ReadPosRankSum=0.776;VQSLOD=3.2754;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:25:32.53:33,0,44	1/1:7,1:8:8.77:155,9,0	0/0:33,0:3:3.01:0,3,84	./.	0/0:27,0:27:69.18:0,69,2307	1/1:20,4:23:21.06:603,21,0	1/1:35,0:35:29.37:398,29,0	0/1:54,0:45:67.44:215,0,67	1/1:26,7:33:38.60:678,39,0	1/1:26,1:26:43.37:1050,43,0	1/1:8,0:8:9:123,9,0	1/1:25,0:25:23.45:220,23,0	0/1:17,0:17:21.57:138,0,22	1/1:25,0:25:17.84:186,18,0	1/1:25,3:28:0.75:484,1,0	1/1:23,3:25:23.81:476,24,0	1/1:23,1:23:21.34:367,21,0	1/1:26,0:26:33:643,33,0	0/1:21,0:19:65.25:340,0,65	1/1:19,0:19:8.25:36,8,0	1/1:40,0:34:4.01:40,4,0	1/1:23,0:23:7.26:61,7,0	1/1:29,0:29:8.06:48,8,0	0/0:22,0:21:3:0,3,27	0/0:17,0:17:33.10:0,33,1358	1/1:13,23:35:51.15:1213,51,0	1/1:12,4:16:23.97:651,24,0	1/1:8,1:9:2.08:370,2,0
chr10	10197046	.	G	GAT	2392.71	PASS	AB=0.913;AC=25;AF=0.446;AN=56;BaseQRankSum=9.345;DP=696;FS=5.537;HRun=0;HaplotypeScore=268.8197;InbreedingCoeff=-0.2940;MQ=41.40;MQ0=23;MQRankSum=-6.746;QD=4.34;ReadPosRankSum=-1.145;VQSLOD=1.8061;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:21,0:21:14.37:36,0,14	0/1:7,2:9:39.54:40,0,161	0/0:27,0:2:5.97:0,6,65	0/0:35,0:4:2.92:0,3,22	0/0:29,0:29:78.26:0,78,1173	0/1:21,3:23:99:128,0,241	0/1:22,16:39:58.62:59,0,480	0/1:50,0:38:92.55:93,0,401	0/1:27,4:31:99:131,0,376	0/1:20,5:24:99:374,0,372	0/0:5,0:5:9.03:0,9,122	1/1:26,0:26:12.09:192,12,0	0/1:19,0:21:6.48:94,0,6	1/1:21,0:22:5.38:160,5,0	0/0:21,0:21:41.96:0,42,527	0/1:20,3:22:99:128,0,289	0/1:25,0:25:99:155,0,227	0/1:27,3:29:99:228,0,431	0/1:25,0:18:14.67:15,0,180	0/1:15,0:16:1.71:65,0,2	0/1:43,0:37:24.41:36,0,24	0/1:22,0:20:22.14:54,0,22	1/1:28,0:28:14.42:98,14,0	1/1:22,0:22:3.01:31,3,0	0/0:16,0:16:39.12:0,39,573	0/1:31,0:28:99:260,0,231	0/1:10,3:13:99:181,0,133	0/0:10,0:10:2:0,2,222
chr10	10197048	.	CACACACACAG	C	6827.76	PASS	AB=0.928;AC=28;AF=0.500;AN=56;BaseQRankSum=6.362;DP=703;FS=0.445;HRun=0;HaplotypeScore=302.5226;InbreedingCoeff=-0.3408;MQ=41.17;MQ0=23;MQRankSum=-3.227;QD=11.92;ReadPosRankSum=4.520;VQSLOD=3.0626;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:17,5:21:60:128,0,60	0/1:9,0:9:33.67:34,0,86	0/0:29,0:2:3.01:0,3,122	0/0:32,0:5:2.68:0,3,38	0/0:29,0:29:81.26:0,81,3103	0/1:24,0:23:0.68:349,0,1	0/1:41,0:41:90.56:91,0,111	0/1:46,4:39:99:620,0,297	0/1:30,0:30:78.28:207,0,78	0/1:26,0:25:45.43:495,0,45	0/1:4,1:5:17.79:26,0,18	1/1:10,16:26:27.78:739,28,0	0/1:10,11:21:93.40:435,0,93	1/1:7,15:22:22.95:565,23,0	0/1:24,0:24:99:187,0,122	0/1:23,0:22:60.11:193,0,60	0/1:27,0:26:31.12:136,0,31	0/1:31,0:29:99:241,0,213	0/1:23,5:20:99:556,0,189	1/1:5,11:16:13.71:275,14,0	0/1:43,0:37:20.29:50,0,20	0/1:9,13:20:8.50:179,0,8	1/1:11,18:29:14.10:288,14,0	0/0:18,6:23:2.80:0,3,13	0/0:15,0:15:36.12:0,36,1669	0/1:31,0:28:11.54:541,0,12	1/1:14,0:14:1.84:336,2,0	0/1:9,0:9:9.98:158,0,10
chr10	10197056	.	C	CAGAG	1013.81	PASS	AB=0.992;AC=14;AF=0.250;AN=56;BaseQRankSum=9.053;DP=727;FS=12.622;HRun=0;HaplotypeScore=294.6642;InbreedingCoeff=0.4002;MQ=39.42;MQ0=24;MQRankSum=-8.614;QD=3.58;ReadPosRankSum=0.244;VQSLOD=0.9549;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:21,0:21:40.12:101,0,40	0/0:9,0:9:11.98:0,12,121	0/0:30,0:2:6.02:0,6,112	0/0:38,0:7:11.62:0,12,159	0/0:32,0:32:81.26:0,81,1463	0/0:25,0:24:30.08:0,30,409	0/0:35,0:35:41.36:0,41,466	0/1:50,0:36:99:117,0,503	0/0:33,0:33:47.75:0,48,583	0/0:24,0:23:58.40:0,58,640	0/0:7,0:7:12.01:0,12,133	0/1:25,0:25:8.09:187,0,8	0/1:24,0:24:68.51:97,0,69	1/1:23,0:23:19.74:191,20,0	0/0:23,0:23:42.05:0,42,523	0/0:24,0:23:29.85:0,30,360	0/0:27,0:27:17.68:0,18,388	0/0:30,0:29:37.68:0,38,658	0/0:33,0:23:35.85:0,36,471	1/1:17,0:17:14.54:84,15,0	0/1:38,2:35:15.72:170,0,16	0/1:26,0:24:5.01:57,0,5	1/1:30,0:29:14.76:102,15,0	1/1:23,4:26:3.01:79,3,0	0/0:14,0:14:36.12:0,36,674	0/0:30,0:27:57.08:0,57,705	0/0:16,0:16:26.85:0,27,298	0/0:13,0:13:32.88:0,33,383
chr10	10197073	.	A	ATACT	242.19	PASS	AB=0.952;AC=7;AF=0.125;AN=56;BaseQRankSum=4.489;DP=760;FS=37.926;HRun=0;HaplotypeScore=309.6667;InbreedingCoeff=0.2838;MQ=37.63;MQ0=23;MQRankSum=-3.765;QD=1.33;ReadPosRankSum=-0.818;VQSLOD=1.3671;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:3.36:0,3,64	0/0:5,0:5:5.18:0,5,124	0/0:42,0:3:9.03:0,9,159	0/0:47,0:9:17.89:0,18,362	0/0:31,0:31:87.28:0,87,1734	0/0:21,0:20:33.11:0,33,631	0/0:32,0:31:33.43:0,33,634	0/0:55,0:36:84.99:0,85,1264	0/0:31,0:31:50.83:0,51,832	0/0:23,0:22:63.11:0,63,1159	0/0:8,0:8:5.98:0,6,83	0/0:24,0:24:12.47:0,12,122	0/0:26,0:26:17.44:0,17,228	0/0:20,0:20:3.49:0,3,28	0/0:21,0:21:36.02:0,36,611	0/0:28,0:27:38.59:0,39,723	0/1:27,5:32:36.47:36,0,727	0/1:30,4:32:99:279,0,1209	0/0:33,0:25:61.55:0,62,961	0/1:18,0:18:0.09:1,0,0	1/1:41,0:36:2.43:25,2,0	0/1:27,0:25:0.54:1,0,1	0/1:30,0:29:0.02:0,0,1	0/0:30,0:29:0.66:0,1,3	0/0:16,0:16:39.03:0,39,818	0/0:33,0:30:66.21:0,66,1228	0/0:20,0:20:34.76:0,35,699	0/0:11,0:11:2.81:0,3,389
chr10	10197082	.	TAGACACACAC	T	1122.83	PASS	AB=0.900;AC=6;AF=0.107;AN=56;BaseQRankSum=0.106;DP=767;FS=6.891;HRun=0;HaplotypeScore=338.1960;InbreedingCoeff=0.1182;MQ=37.73;MQ0=22;MQRankSum=-7.011;QD=6.00;ReadPosRankSum=-2.268;VQSLOD=0.9438;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,3:21:3.13:0,3,16	0/0:5,0:5:5.75:0,6,130	0/0:49,0:3:8.95:0,9,184	0/0:50,0:13:30.08:0,30,594	0/0:28,0:28:63.22:0,63,2203	0/0:20,0:19:29.18:0,29,571	0/0:35,0:34:39.85:0,40,1051	0/1:58,1:38:99:659,0,226	0/0:28,0:28:41.88:0,42,1103	0/0:21,0:21:45.14:0,45,1288	0/0:8,0:8:6.02:0,6,167	0/0:21,3:24:8.93:0,9,96	0/1:20,6:26:90.76:135,0,91	0/0:20,2:22:7.24:0,7,61	0/0:19,0:19:1.30:0,1,887	0/0:22,0:22:37.61:0,38,1000	0/0:38,0:38:67.03:0,67,1449	0/0:33,0:31:84.82:0,85,1775	0/1:30,3:23:72.71:393,0,73	0/0:18,2:20:2.86:0,3,7	1/1:36,1:30:1.94:44,2,0	0/0:22,6:27:3.56:0,4,25	0/1:28,4:31:0:0,0,1	0/0:23,6:28:3.01:0,3,31	0/0:16,0:16:33.11:0,33,1001	0/0:36,0:33:58.06:0,58,1140	0/0:19,0:19:22.01:0,22,758	0/0:9,0:9:17.47:0,17,448
chr10	10197084	.	G	GAC	350.14	PASS	AB=0.993;AC=7;AF=0.125;AN=56;BaseQRankSum=3.720;DP=764;FS=2.719;HRun=0;HaplotypeScore=284.2555;InbreedingCoeff=0.1245;MQ=37.79;MQ0=25;MQRankSum=-6.125;QD=1.74;ReadPosRankSum=-3.439;VQSLOD=2.0015;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:22:2.44:0,2,10	0/0:5,0:5:6.02:0,6,78	0/0:49,0:3:6.02:0,6,77	0/0:49,0:13:27.05:0,27,326	0/0:27,0:27:63.20:0,63,814	0/0:19,0:19:23.95:0,24,297	0/0:35,0:35:28.25:0,28,464	0/1:55,2:35:99:253,0,248	0/0:29,0:29:41.91:0,42,544	0/0:22,0:22:58.68:0,59,725	0/0:8,0:8:6.02:0,6,78	0/0:22,0:22:7.40:0,7,80	0/1:25,0:25:60.26:60,0,113	0/0:22,0:22:4.77:0,5,56	0/1:18,0:18:1.47:1,0,316	0/0:22,0:22:21.38:0,21,436	0/0:37,1:38:41.15:0,41,669	0/0:34,0:32:75.43:0,75,853	0/1:32,0:21:48.71:113,0,49	0/0:21,0:21:2.86:0,3,26	1/1:38,1:31:4.20:34,4,0	0/0:28,0:27:2.19:0,2,31	0/1:30,0:29:0.09:0,0,0	0/0:28,1:28:2.26:0,2,8	0/0:17,0:17:33.07:0,33,426	0/0:35,0:32:62.15:0,62,642	0/0:19,0:19:34.26:0,34,427	0/0:10,0:10:16.29:0,16,195
chr10	10197088	.	CACACAG	C	120.05	PASS	AB=0.969;AC=6;AF=0.107;AN=56;BaseQRankSum=2.936;DP=769;FS=1.616;HRun=0;HaplotypeScore=311.8436;InbreedingCoeff=0.1516;MQ=38.53;MQ0=24;MQRankSum=-6.180;QD=0.66;ReadPosRankSum=-2.723;VQSLOD=1.5164;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,2:23:3.12:0,3,18	0/0:5,0:5:6.02:0,6,178	0/0:46,0:3:9.03:0,9,179	0/0:43,0:13:29.76:0,30,656	0/0:27,0:27:66.22:0,66,2088	0/0:20,0:20:27.09:0,27,852	0/0:38,0:37:44.96:0,45,1417	0/1:51,0:31:78:78,0,385	0/0:32,0:32:54.19:0,54,1650	0/0:24,0:24:65.56:0,66,1847	0/0:10,0:10:5.94:0,6,210	0/0:22,2:24:14.99:0,15,188	0/1:27,1:28:35.59:36,0,160	0/0:24,0:24:8.42:0,8,89	0/0:18,0:18:1.67:0,2,908	0/0:23,0:23:31.71:0,32,1225	0/0:38,0:38:52.69:0,53,1906	0/0:34,0:32:90.19:0,90,2362	0/1:33,0:21:90.17:90,0,214	0/0:20,1:21:6.02:0,6,121	1/1:39,0:31:4.91:27,5,0	0/0:23,2:24:2.58:0,3,46	0/1:27,3:29:0:0,0,1	0/0:31,0:30:6:0,6,57	0/0:19,0:19:39.10:0,39,992	0/0:34,0:32:68.19:0,68,1511	0/0:19,0:19:35.38:0,35,1052	0/0:9,0:9:20.99:0,21,527
chr10	10197104	.	CAGACAT	C	187.55	PASS	AB=0.994;AC=11;AF=0.196;AN=56;BaseQRankSum=3.121;DP=769;FS=32.933;HRun=0;HaplotypeScore=298.7992;InbreedingCoeff=0.0294;MQ=40.93;MQ0=23;MQRankSum=-4.291;QD=0.77;ReadPosRankSum=-4.400;VQSLOD=0.8889;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:29:1.97:2,0,62	0/1:7,0:7:22.18:22,0,115	0/0:28,0:2:5.85:0,6,53	0/1:39,0:9:1.04:1,0,194	0/0:27,0:27:66.22:0,66,1763	0/0:20,0:19:33.11:0,33,925	0/0:34,0:34:50.58:0,51,1400	0/0:35,0:22:19.55:0,20,338	0/0:32,0:32:57.20:0,57,1741	0/0:32,0:30:33.37:0,33,1372	0/0:12,0:12:5.76:0,6,173	0/0:24,1:25:4.49:0,4,97	0/1:29,0:29:53.36:53,0,56	0/1:22,1:23:13.42:20,0,13	0/0:22,0:22:0.25:0,0,804	0/1:35,0:35:99:118,0,1176	0/0:41,0:41:49.65:0,50,1711	0/0:37,0:35:38.56:0,39,1870	0/1:28,0:18:56.08:56,0,527	0/0:25,0:25:12.03:0,12,248	0/0:34,0:29:3.81:0,4,116	1/1:26,1:26:0.55:23,1,0	1/1:25,2:26:2.47:21,2,0	0/0:40,0:39:11.94:0,12,117	0/0:19,0:19:45.15:0,45,1175	0/0:30,0:29:34.62:0,35,1054	0/0:20,0:20:33.50:0,33,826	0/0:11,0:11:13.07:0,13,443
chr10	10197106	.	GAC	G	182.65	PASS	AB=0.822;AC=7;AF=0.125;AN=56;BaseQRankSum=7.300;DP=773;FS=7.974;HRun=0;HaplotypeScore=268.8371;InbreedingCoeff=0.0065;MQ=41.25;MQ0=24;MQRankSum=-5.570;QD=1.03;ReadPosRankSum=-2.230;VQSLOD=0.5943;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,3:29:6.19:0,6,164	0/0:7,0:7:5.99:0,6,92	0/0:25,0:1:3.01:0,3,37	0/0:40,0:8:15.52:0,16,248	0/0:26,0:26:66.21:0,66,1121	0/0:19,0:18:33.10:0,33,558	0/0:34,0:33:47.42:0,47,880	0/1:29,4:22:51.30:51,0,552	0/0:33,0:33:57.66:0,58,1023	0/0:32,0:30:82.53:0,83,1215	0/0:12,0:12:6:0,6,111	0/1:18,7:25:22.77:23,0,157	0/1:20,11:31:99:116,0,174	0/1:15,6:23:33.15:33,0,41	0/0:23,0:23:29.24:0,29,588	0/0:33,0:35:53.28:0,53,1030	0/0:36,4:41:29.50:0,30,1134	0/1:34,4:36:53.21:53,0,1199	0/0:28,1:19:6.60:0,7,509	0/0:17,9:26:14.93:0,15,212	0/0:30,5:30:8.94:0,9,118	1/1:20,7:26:2:29,2,0	0/0:21,5:25:2.28:0,2,8	0/0:40,2:41:9.95:0,10,167	0/0:19,0:19:45.02:0,45,775	0/0:30,0:29:54.81:0,55,818	0/0:20,0:20:38.99:0,39,609	0/0:11,0:11:5.96:0,6,321
chr10	10197108	.	CAT	C	234.56	PASS	AB=0.980;AC=15;AF=0.268;AN=56;BaseQRankSum=5.626;DP=766;FS=21.165;HRun=0;HaplotypeScore=259.6280;InbreedingCoeff=0.0318;MQ=41.76;MQ0=22;MQRankSum=-5.477;QD=0.71;ReadPosRankSum=-5.216;VQSLOD=-0.1237;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:30:2.49:2,0,91	0/1:7,0:7:2.69:3,0,45	0/0:25,0:2:5.96:0,6,44	0/0:37,1:7:15.40:0,15,114	0/0:26,0:26:63.06:0,63,891	0/0:23,0:22:36.86:0,37,513	0/0:34,0:33:44.22:0,44,718	0/1:33,0:23:9.64:10,0,316	0/0:32,0:32:56.10:0,56,859	0/0:32,2:32:19.19:0,19,653	0/0:12,0:12:6:0,6,69	0/1:23,0:23:16.31:16,0,89	0/1:32,0:32:91.68:92,0,109	0/1:21,1:22:1.10:35,0,1	0/1:21,1:22:19.81:20,0,326	0/1:31,4:35:92.85:93,0,510	0/0:41,0:41:25.50:0,25,705	0/1:38,1:37:21.84:22,0,715	0/1:29,0:20:9.71:10,0,422	0/0:25,0:25:14.74:0,15,199	0/0:35,0:30:11.61:0,12,176	1/1:24,0:23:8.48:62,8,0	1/1:22,0:21:2.75:17,3,0	0/0:42,0:41:11.52:0,12,108	0/0:19,0:19:34.86:0,35,668	0/0:31,0:29:35.04:0,35,503	0/0:20,0:20:35.78:0,36,400	0/1:11,0:11:0.81:1,0,195
chr10	10197136	.	CAG	C	3953.42	PASS	AB=0.992;AC=33;AF=0.589;AN=56;BaseQRankSum=-9.068;DP=832;FS=11.240;HRun=0;HaplotypeScore=209.4360;InbreedingCoeff=-0.1453;MQ=51.28;MQ0=15;MQRankSum=-1.424;QD=5.74;ReadPosRankSum=-7.643;VQSLOD=-0.0111;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:35,0:35:10.04:98,10,0	1/1:6,0:6:7.85:58,8,0	0/0:43,0:9:19.45:0,19,182	0/0:45,0:18:29.74:0,30,318	0/0:33,0:33:78.05:0,78,988	0/1:25,0:24:99:110,0,100	0/1:27,1:28:99:121,0,149	0/1:35,0:28:2.85:380,0,3	0/1:33,0:33:99:240,0,213	0/1:40,0:38:32.14:355,0,32	1/1:16,0:16:4.72:68,5,0	1/1:23,0:23:8.57:89,9,0	0/1:30,0:30:43.40:50,0,43	1/1:26,0:26:14.66:161,15,0	1/1:30,0:30:2.68:238,3,0	0/1:32,2:34:8.90:316,0,9	0/1:41,0:41:30.42:90,0,30	0/1:37,0:35:70.68:110,0,71	0/1:24,0:24:99:186,0,135	0/1:29,1:30:65:133,0,65	0/1:42,0:42:34.09:281,0,34	1/1:27,0:26:0.92:126,1,0	1/1:19,0:18:14.90:113,15,0	1/1:40,0:40:7.10:87,7,0	0/0:22,0:22:46.85:0,47,746	0/1:29,0:28:1.86:216,0,2	0/1:28,0:28:8.26:266,0,8	0/1:11,0:11:17.05:62,0,17
chr10	10198309	.	AG	A	8015.93	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=12.667;DP=658;FS=11.854;HRun=7;HaplotypeScore=67.9753;InbreedingCoeff=0.9995;MQ=83.38;MQ0=0;MQRankSum=-6.698;QD=26.54;ReadPosRankSum=2.852;VQSLOD=4.9691;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,49:51:99:1438,141,0	0/0:11,0:11:24.08:0,24,301	0/0:20,0:20:51.11:0,51,605	0/0:20,0:20:48.06:0,48,561	0/0:19,0:19:54.16:0,54,667	0/0:23,0:23:66.20:0,66,818	0/0:19,0:19:51.15:0,51,628	1/1:2,18:20:54.09:542,54,0	0/0:18,0:18:39.12:0,39,490	0/0:32,0:32:78.25:0,78,975	0/0:23,0:23:63.19:0,63,779	1/1:5,26:31:81.18:826,81,0	1/1:3,12:15:39.08:398,39,0	1/1:1,29:30:78.18:795,78,0	0/0:17,0:17:51.14:0,51,616	0/0:15,0:15:36.12:0,36,453	0/0:35,0:35:96.28:0,96,1182	0/0:25,1:25:47.64:0,48,913	1/1:1,12:13:36.06:359,36,0	1/1:3,17:20:51.07:507,51,0	1/1:4,32:36:99:1010,99,0	1/1:4,21:25:63.14:641,63,0	1/1:2,14:16:27.06:275,27,0	1/1:3,42:45:99:1224,120,0	0/0:13,0:13:39.10:0,39,464	0/0:24,0:24:63.20:0,63,793	0/0:29,0:29:84.27:0,84,1053	0/0:12,0:12:33.11:0,33,415
chr10	10198316	.	GT	G	1482.21	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=19.037;DP=661;FS=5.500;HRun=1;HaplotypeScore=88.3680;InbreedingCoeff=0.7143;MQ=84.87;MQ0=0;MQRankSum=-6.927;QD=4.74;ReadPosRankSum=4.265;VQSLOD=0.8701;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:52,1:53:45.82:312,46,0	0/0:8,0:8:24.08:0,24,342	0/0:19,0:19:57.01:0,57,767	0/0:23,0:23:63.03:0,63,777	0/0:20,0:20:60.16:0,60,802	0/0:24,0:24:69.13:0,69,915	0/0:19,0:19:57.14:0,57,735	0/1:26,0:26:19.63:20,0,144	0/0:13,0:13:39.11:0,39,537	0/0:28,0:28:84.27:0,84,1168	0/0:22,0:22:66.20:0,66,883	1/1:29,2:31:3.20:200,3,0	1/1:13,1:14:9.90:109,10,0	1/1:31,0:31:19.35:217,19,0	0/0:17,0:17:51.17:0,51,723	0/0:13,0:13:38.96:0,39,508	0/0:35,0:35:99:0,105,1402	0/0:28,0:27:77.65:0,78,1105	0/1:16,0:16:17.83:18,0,55	1/1:18,3:21:16:167,16,0	1/1:34,1:35:47.82:198,48,0	1/1:23,2:25:9.21:151,9,0	0/1:16,0:16:23.01:42,0,23	1/1:44,1:45:56.59:249,57,0	0/0:15,0:15:42.10:0,42,561	0/0:23,0:23:69.21:0,69,938	0/0:29,0:29:87.27:0,87,1210	0/0:12,0:12:36.10:0,36,494
chr10	10198810	.	CG	C	10277.54	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=10.189;DP=715;FS=2.341;HRun=3;HaplotypeScore=84.4098;InbreedingCoeff=1.0000;MQ=90.31;MQ0=0;MQRankSum=-2.881;QD=34.14;ReadPosRankSum=1.486;VQSLOD=5.4385;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,29:29:84.26:1041,84,0	0/0:14,0:14:39.13:0,39,561	0/0:33,0:33:95.07:0,95,1297	0/0:23,0:23:60.20:0,60,860	0/0:16,0:16:45.15:0,45,647	0/0:20,0:20:57.19:0,57,820	0/0:35,0:35:99:0,99,1388	1/1:1,21:22:63.18:763,63,0	0/0:26,0:26:75.23:0,75,1044	0/0:30,0:30:90.30:0,90,1279	0/0:20,0:20:45.14:0,45,628	1/1:0,27:27:75.24:929,75,0	1/1:0,32:32:81.25:1002,81,0	1/1:1,33:34:96.30:1189,96,0	0/0:34,0:34:93.31:0,93,1335	0/0:26,0:26:75.24:0,75,1062	0/0:27,0:27:78.26:0,78,1123	0/0:19,0:19:54.18:0,54,776	1/1:0,22:22:66.21:817,66,0	1/1:0,28:28:72.23:891,72,0	1/1:1,41:42:99:1413,114,0	1/1:0,13:13:39.12:483,39,0	1/1:0,22:22:54.64:670,55,0	1/1:0,30:30:87.27:1078,87,0	0/0:17,0:17:51.16:0,51,717	0/0:32,0:32:93.30:0,93,1322	0/0:29,0:29:84.28:0,84,1208	0/0:13,0:13:39.13:0,39,561
chr10	10198989	.	T	TGG	9411.10	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-16.378;DP=613;FS=13.557;HRun=6;HaplotypeScore=94.6770;InbreedingCoeff=0.9939;MQ=90.43;MQ0=0;MQRankSum=-2.166;QD=38.41;ReadPosRankSum=2.358;VQSLOD=3.5359;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,40:46:99:1775,105,0	0/0:6,0:6:18.06:0,18,219	0/0:26,0:26:60.77:0,61,678	0/0:28,0:28:61.99:0,62,673	0/0:21,0:21:49.95:0,50,586	0/0:23,0:23:49.93:0,50,575	0/0:24,0:24:57.15:0,57,671	1/1:4,12:16:33.07:470,33,0	0/0:25,0:25:69.19:0,69,825	0/0:21,0:21:51.13:0,51,593	0/0:27,0:27:56.88:0,57,655	1/1:1,16:17:27.09:457,27,0	1/1:0,22:23:54.18:907,54,0	1/1:3,26:29:63.22:1065,63,0	0/0:23,0:22:54.09:0,54,620	0/0:26,0:26:63.17:0,63,757	0/0:26,0:26:69.19:0,69,825	0/0:19,0:19:51.13:0,51,607	1/1:1,9:12:33.09:521,33,0	1/1:0,20:20:54.06:847,54,0	1/1:4,19:23:66.21:1090,66,0	1/1:1,11:12:24.08:405,24,0	1/1:4,15:19:32.84:556,33,0	1/1:1,27:28:78.27:1319,78,0	0/0:23,0:23:48.12:0,48,571	0/0:19,0:19:45.13:0,45,549	0/0:27,0:27:63.18:0,63,767	0/0:4,0:4:12.04:0,12,146
chr10	10199189	.	CA	C	323.77	PASS	AB=0.943;AC=12;AF=0.214;AN=56;BaseQRankSum=-7.807;DP=477;FS=8.264;HRun=16;HaplotypeScore=92.8258;InbreedingCoeff=0.2988;MQ=40.91;MQ0=19;MQRankSum=0.861;QD=2.28;ReadPosRankSum=0.926;VQSLOD=-0.4262;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:15:11.77:0,12,74	0/1:8,1:9:1.26:1,0,54	0/0:13,0:2:0:0,0,0	0/0:7,0:3:0:0,0,0	1/1:5,13:20:7.66:144,8,0	0/0:22,1:23:16.29:0,16,171	0/0:9,0:10:5.70:0,6,36	0/0:25,0:22:14.05:0,14,71	0/0:19,0:19:20.29:0,20,155	0/1:26,0:25:32.02:32,0,121	0/0:28,3:31:6.81:0,7,183	0/1:11,0:9:6.94:7,0,9	0/0:11,0:10:6.36:0,6,19	0/1:18,1:14:12.23:20,0,12	0/0:14,0:16:22.25:0,22,105	0/1:13,4:17:26.51:27,0,60	0/0:12,3:15:12.90:0,13,109	1/1:7,2:6:5.84:35,6,0	0/0:12,0:9:10.59:0,11,66	0/0:27,0:25:27.15:0,27,120	0/0:4,0:4:0:0,0,0	0/1:13,0:12:2.84:3,0,22	0/0:16,0:16:6.27:0,6,33	0/0:12,0:12:4.61:0,5,19	1/1:8,10:18:17.22:196,17,0	0/0:28,0:27:46.64:0,47,216	0/0:24,0:24:6.69:0,7,90	0/0:14,0:11:10.27:0,10,58
chr10	10199196	.	A	AG	561.99	PASS	AB=0.930;AC=11;AF=0.196;AN=56;BaseQRankSum=6.971;DP=507;FS=26.588;HRun=0;HaplotypeScore=91.6396;InbreedingCoeff=0.0314;MQ=47.80;MQ0=17;MQRankSum=-1.395;QD=3.60;ReadPosRankSum=0.973;VQSLOD=1.3191;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:17,0:14:8.53:9,0,75	0/0:9,0:9:26.74:0,27,194	0/1:15,0:4:0.74:1,0,16	0/0:10,0:4:11.90:0,12,89	0/0:20,0:20:47.91:0,48,413	0/0:25,0:24:68.01:0,68,482	0/0:14,0:13:14.70:0,15,97	0/1:18,1:16:76.68:118,0,77	0/0:23,0:23:59.15:0,59,449	0/0:26,0:25:63.17:0,63,430	0/0:32,0:31:80.22:0,80,603	0/0:11,0:9:7.45:0,7,35	0/1:11,0:9:3.93:62,0,4	0/1:17,3:15:23.29:165,0,23	0/0:19,0:19:26.22:0,26,158	0/0:19,0:19:47.34:0,47,340	0/0:17,0:16:41.19:0,41,272	0/0:10,0:7:14.90:0,15,114	0/1:12,0:10:24.63:25,0,108	0/1:20,14:33:69.37:214,0,69	1/1:2,0:2:2.94:18,3,0	0/1:14,0:13:26.65:27,0,56	0/0:19,0:19:7.64:0,8,59	0/1:9,2:10:4.25:65,0,4	0/0:25,0:25:70.15:0,70,604	0/0:31,0:30:85.43:0,85,604	0/0:27,0:25:38.30:0,38,273	0/0:14,0:11:23.86:0,24,177
chr10	10199201	.	A	AAAAG	9254.84	PASS	AB=0.758;AC=45;AF=0.804;AN=56;BaseQRankSum=-2.253;DP=549;FS=15.033;HRun=0;HaplotypeScore=94.8160;InbreedingCoeff=0.5457;MQ=51.64;MQ0=16;MQRankSum=-3.164;QD=19.40;ReadPosRankSum=2.607;VQSLOD=3.5525;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:12,0:20:27.50:52,0,27	1/1:5,3:9:22.75:402,23,0	0/0:15,0:4:5.50:0,5,26	0/0:12,0:6:8.10:0,8,82	0/0:20,0:20:45.54:0,46,493	1/1:16,8:26:53.20:1030,53,0	1/1:3,10:16:9.26:200,9,0	1/1:20,0:18:26.54:224,27,0	0/1:18,0:22:38.78:375,0,39	1/1:6,15:23:36.28:910,36,0	0/1:22,7:32:5.45:753,0,5	1/1:7,0:14:8.46:74,8,0	1/1:13,0:11:17.56:130,18,0	1/1:18,0:14:22.80:226,23,0	1/1:3,17:25:24.06:494,24,0	1/1:14,6:20:46.97:603,47,0	1/1:7,5:15:36:563,36,0	1/1:10,0:7:14.79:145,15,0	1/1:12,0:12:23.01:216,23,0	1/1:34,0:34:20.88:399,21,0	1/1:2,0:2:2.92:18,3,0	1/1:3,0:15:12.13:147,12,0	1/1:2,0:24:6.01:75,6,0	1/1:11,0:10:14.26:112,14,0	0/0:25,0:25:35.11:0,35,625	1/1:5,24:33:78.03:1284,78,0	1/1:10,15:28:12.90:476,13,0	1/1:8,8:14:16.94:347,17,0
chr10	10199283	.	TGATAGATAGATA	T	4487.73	PASS	AB=1.000;AC=36;AF=0.720;AN=50;BaseQRankSum=0.339;DP=612;FS=34.852;HRun=0;HaplotypeScore=259.7881;InbreedingCoeff=0.0417;MQ=57.95;MQ0=8;MQRankSum=-2.395;QD=9.07;ReadPosRankSum=5.420;VQSLOD=2.5442;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:34,0:34:27.53:493,28,0	1/1:8,0:11:6.98:93,7,0	./.	./.	0/0:37,0:36:72.18:0,72,1910	1/1:13,9:22:6.02:207,6,0	0/1:12,0:12:0:0,0,0	0/1:22,0:20:0:0,0,0	1/1:9,19:28:15.05:462,15,0	1/1:13,0:13:7.22:183,7,0	1/1:25,0:31:7.75:50,8,0	0/1:21,0:21:99:226,0,376	0/1:13,0:13:99:248,0,167	0/1:17,0:16:99:152,0,209	1/1:25,0:27:8.98:93,9,0	1/1:23,0:23:15.01:179,15,0	0/1:20,0:20:54.55:98,0,55	1/1:10,0:10:12.04:236,12,0	0/1:18,0:18:40.62:142,0,41	1/1:37,0:38:4.59:310,5,0	./.	0/1:21,0:21:84.51:136,0,85	0/1:22,0:22:99:149,0,257	0/1:24,0:24:99:147,0,569	0/0:34,0:33:51.13:0,51,1324	1/1:26,0:29:26.52:446,27,0	1/1:24,0:25:23.98:307,24,0	1/1:11,0:11:0.78:130,1,0
chr10	10199326	.	TAGAC	T	381.78	PASS	AB=1.000;AC=6;AF=0.107;AN=56;BaseQRankSum=2.896;DP=601;FS=19.707;HRun=0;HaplotypeScore=232.0436;InbreedingCoeff=0.3849;MQ=44.07;MQ0=18;MQRankSum=-1.301;QD=3.26;ReadPosRankSum=5.110;VQSLOD=0.9938;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:31:13.01:0,13,158	0/0:8,0:8:1.14:0,1,64	0/0:16,0:8:21.40:0,21,164	0/0:13,0:5:1.38:0,1,35	1/1:15,21:35:20.81:339,21,0	0/1:20,0:19:5.10:5,0,80	0/0:24,0:23:17.82:0,18,135	0/0:30,0:24:56.50:0,57,410	0/1:32,0:32:14.16:14,0,124	0/0:28,0:24:47.59:0,48,414	0/0:23,0:23:5.43:0,5,49	0/0:22,0:22:32.50:0,33,423	0/0:19,0:19:23.72:0,24,282	0/0:16,0:15:21:0,21,301	0/0:23,0:23:3.17:0,3,86	0/0:21,0:21:14.78:0,15,135	0/0:21,0:22:19.85:0,20,192	0/0:17,0:17:12.82:0,13,180	0/0:26,0:22:47.66:0,48,396	0/0:29,0:28:17.70:0,18,161	0/0:19,0:18:8.73:0,9,69	0/0:12,0:12:9:0,9,119	0/0:13,0:13:15.02:0,15,259	0/0:31,0:31:48.07:0,48,775	1/1:8,21:29:9.03:145,9,0	0/0:17,0:17:5.06:0,5,176	0/0:17,0:17:12.10:0,12,145	0/0:5,0:5:5.94:0,6,43
chr10	10201272	.	T	TACACAC	12362.66	PASS	AC=46;AF=0.852;AN=54;BaseQRankSum=0.218;DP=696;FS=2.194;HRun=0;HaplotypeScore=208.7747;InbreedingCoeff=0.7311;MQ=56.10;MQ0=12;MQRankSum=-6.390;QD=22.68;ReadPosRankSum=0.236;VQSLOD=4.5588;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:40,0:39:2.85:47,3,0	1/1:2,4:11:18.53:412,19,0	0/0:49,0:29:26.79:0,27,413	0/0:47,0:28:15.48:0,15,285	0/0:14,0:18:39.12:0,39,696	1/1:12,8:24:27.09:827,27,0	1/1:22,9:34:21.07:630,21,0	1/1:22,0:18:21.06:366,21,0	1/1:18,12:33:39.13:1275,39,0	1/1:17,7:28:46.39:1001,46,0	1/1:5,0:8:3.01:78,3,0	1/1:15,0:15:15.02:264,15,0	1/1:24,0:24:21.03:427,21,0	1/1:28,0:28:6.02:125,6,0	1/1:14,15:31:44.41:1477,44,0	1/1:11,9:26:36.12:984,36,0	1/1:14,2:20:20.28:494,20,0	1/1:10,6:17:9.03:269,9,0	1/1:21,0:18:25.62:393,26,0	1/1:18,0:17:6.02:131,6,0	1/1:19,0:16:2.94:19,3,0	1/1:25,0:25:6.02:96,6,0	./.	1/1:30,0:28:2.55:54,3,0	0/0:23,0:23:51.15:0,51,1030	1/1:17,9:29:54.17:1461,54,0	1/1:14,13:30:37.64:1152,38,0	1/1:4,3:9:15.05:381,15,0
chr10	10205492	.	GCACACACA	G	4784.81	PASS	AB=0.845;AC=19;AF=0.339;AN=56;BaseQRankSum=-2.543;DP=585;FS=18.294;HRun=0;HaplotypeScore=171.8744;InbreedingCoeff=0.6821;MQ=53.90;MQ0=14;MQRankSum=5.262;QD=19.77;ReadPosRankSum=4.734;VQSLOD=2.7188;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:28:20.64:792,21,0	0/0:7,0:7:9.03:0,9,327	0/0:25,0:12:15.05:0,15,350	0/0:15,0:4:6.02:0,6,208	0/0:16,0:16:33.10:0,33,648	0/0:21,0:21:36.43:0,36,939	0/0:20,0:20:30.10:0,30,939	0/1:17,0:17:11.42:145,0,11	0/0:24,0:23:24.45:0,24,534	0/0:23,0:22:42.14:0,42,1154	0/0:21,0:20:12.04:0,12,392	1/1:19,5:23:48.61:945,49,0	1/1:11,2:13:14.76:356,15,0	1/1:16,2:18:21.07:465,21,0	0/0:29,0:29:18.51:0,19,359	0/0:28,0:27:30.99:0,31,790	0/0:19,0:19:9.02:0,9,104	0/0:16,0:12:14.84:0,15,366	0/1:7,3:8:13.93:147,0,14	1/1:17,0:23:17.98:339,18,0	0/1:38,0:38:17.72:426,0,18	1/1:19,1:19:21.04:330,21,0	1/1:7,7:14:0.47:1,0,0	1/1:27,1:28:47.36:840,47,0	0/0:21,0:20:31.31:0,31,677	0/0:26,0:25:51.16:0,51,1372	0/0:23,0:21:19.97:0,20,548	0/0:5,0:6:9.03:0,9,228
chr10	10205562	.	AG	A	524.34	PASS	AB=0.972;AC=9;AF=0.161;AN=56;BaseQRankSum=0.322;DP=664;FS=4.073;HRun=1;HaplotypeScore=95.2984;InbreedingCoeff=0.1804;MQ=57.76;MQ0=43;MQRankSum=-0.262;QD=3.47;ReadPosRankSum=-0.822;VQSLOD=-0.0597;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:66.57:0,67,905	0/1:11,0:10:18.86:19,0,40	0/0:30,0:20:45.37:0,45,649	0/0:34,0:20:54.93:0,55,667	0/0:38,0:37:84.27:0,84,1115	0/0:18,0:15:1.73:0,2,5	0/1:25,1:22:21.39:64,0,21	0/0:39,0:38:70.51:0,71,955	0/1:24,0:22:1.95:3,0,2	0/1:19,1:16:68.24:280,0,68	1/1:9,6:9:9.03:120,9,0	0/0:27,0:26:53.79:0,54,674	0/0:19,0:18:40.08:0,40,496	0/0:23,0:23:48.13:0,48,579	0/0:29,1:25:2:0,2,5	0/0:27,1:23:2.02:0,2,7	0/1:19,1:18:0.70:1,0,1	0/1:13,1:10:43.30:43,0,58	0/0:19,0:17:48.07:0,48,635	0/0:19,0:19:52.35:0,52,685	0/0:26,0:25:55.82:0,56,740	0/0:27,0:27:35.64:0,36,460	0/0:15,0:15:24.08:0,24,307	0/0:29,0:28:64.44:0,64,875	0/0:29,0:27:56.87:0,57,740	0/1:21,0:20:99:124,0,104	0/0:11,0:10:2.60:0,3,43	0/0:18,1:16:12.92:0,13,147
chr10	10205563	.	G	GAGAGAGAGA	3691.36	PASS	AB=1.000;AC=32;AF=0.593;AN=54;BaseQRankSum=7.651;DP=686;FS=5.772;HRun=0;HaplotypeScore=176.7449;InbreedingCoeff=0.2897;MQ=57.92;MQ0=43;MQRankSum=-2.731;QD=7.87;ReadPosRankSum=-2.284;VQSLOD=1.9186;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:33:14.80:15,0,557	1/1:6,0:11:9.33:110,9,0	0/0:30,0:20:45.47:0,45,664	0/0:34,0:20:57.06:0,57,684	0/0:39,0:38:12.59:0,13,767	1/1:10,7:20:5.98:60,6,0	1/1:13,0:23:18.92:314,19,0	0/1:39,0:38:36.28:36,0,765	1/1:7,15:23:6.01:107,6,0	1/1:9,0:16:30.56:496,31,0	1/1:11,0:9:9.03:120,9,0	0/1:27,0:26:99:156,0,439	0/1:18,0:17:42.51:43,0,410	0/1:23,0:23:34.65:35,0,466	./.	1/1:13,13:27:3.85:23,4,0	1/1:5,0:23:6.59:163,7,0	1/1:7,0:12:18.03:484,18,0	0/0:19,0:17:42.58:0,43,677	0/0:20,0:20:51.30:0,51,642	0/0:26,0:25:32.14:0,32,707	0/1:25,0:25:99:183,0,228	0/0:16,0:16:15.01:0,15,256	0/1:28,0:27:99:548,0,103	0/1:29,0:27:9.16:9,0,548	1/1:7,0:19:42.01:664,42,0	1/1:6,0:11:5.96:44,6,0	1/1:6,0:17:6.85:83,7,0
chr10	10205843	.	CACAT	C	877.51	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=-2.223;DP=876;FS=5.902;HRun=0;HaplotypeScore=206.1692;InbreedingCoeff=0.7185;MQ=57.12;MQ0=20;MQRankSum=-1.034;QD=2.47;ReadPosRankSum=-4.532;VQSLOD=0.6996;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:34,6:40:7.49:119,7,0	0/0:11,0:11:23.79:0,24,239	0/0:26,0:8:14.87:0,15,114	0/0:44,0:16:24.85:0,25,301	0/0:36,0:36:27.63:0,28,415	0/0:26,0:26:63.16:0,63,1414	0/0:52,0:52:99:0,141,2603	1/1:24,1:23:34.17:371,34,0	0/0:36,0:36:92.03:0,92,1746	0/0:32,0:31:81.81:0,82,1340	0/0:13,0:11:6.02:0,6,151	1/1:34,4:37:6.53:117,7,0	1/1:24,0:24:2.76:10,3,0	1/1:26,1:27:5.97:93,6,0	0/0:39,0:39:79.18:0,79,1713	0/0:27,0:27:69.03:0,69,1239	0/0:54,0:54:99:0,138,2716	0/0:17,0:17:41.89:0,42,830	1/1:12,1:12:13.48:209,13,0	1/1:16,3:17:3.33:58,3,0	0/1:80,0:77:10.72:11,0,12	1/1:25,2:26:3.01:57,3,0	1/1:13,0:13:1.43:4,1,0	1/1:48,1:49:0.83:8,1,0	0/0:38,0:38:83.45:0,83,711	0/0:27,0:26:74.02:0,74,1387	0/0:27,0:26:69.13:0,69,1426	0/0:16,0:15:12.74:0,13,763
chr10	10205845	.	CAT	C	4367.10	PASS	AB=0.986;AC=24;AF=0.429;AN=56;BaseQRankSum=0.001;DP=866;FS=5.425;HRun=0;HaplotypeScore=168.0569;InbreedingCoeff=0.8088;MQ=57.28;MQ0=20;MQRankSum=-1.702;QD=10.30;ReadPosRankSum=3.514;VQSLOD=4.0773;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,33:40:23.95:320,24,0	0/0:11,0:11:9.06:0,9,183	0/0:24,0:7:14.87:0,15,114	0/0:42,0:14:24.79:0,25,256	0/1:35,1:36:99:111,0,141	0/0:27,0:27:63.08:0,63,1011	0/0:53,0:53:99:0,114,1897	1/1:6,18:22:56.68:452,57,0	0/0:35,0:35:41.91:0,42,1168	0/0:31,0:30:52.31:0,52,973	0/0:13,0:11:8.93:0,9,131	1/1:7,31:37:19.80:274,20,0	1/1:1,23:24:33.11:500,33,0	1/1:3,23:26:38.88:545,39,0	0/0:40,0:40:67.53:0,68,1276	0/0:25,0:25:56.94:0,57,920	0/0:52,0:52:86.66:0,87,1858	0/0:17,0:17:44.91:0,45,647	1/1:12,0:11:29.10:214,29,0	1/1:4,15:17:15.03:206,15,0	1/1:6,72:75:39.01:557,39,0	1/1:2,25:26:8.91:115,9,0	1/1:1,12:13:6.02:83,6,0	1/1:1,46:47:54.02:821,54,0	0/1:40,0:40:99:170,0,136	0/0:28,0:27:49.46:0,49,968	0/0:28,0:27:43.07:0,43,946	0/0:16,0:15:38.05:0,38,573
chr10	10205847	.	TAC	T	2517.17	PASS	AB=0.951;AC=29;AF=0.537;AN=54;BaseQRankSum=4.049;DP=868;FS=1.387;HRun=0;HaplotypeScore=172.4411;InbreedingCoeff=0.4335;MQ=56.51;MQ0=20;MQRankSum=-0.206;QD=4.20;ReadPosRankSum=2.569;VQSLOD=3.0459;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:40,0:40:22.86:149,23,0	0/0:11,0:11:8.40:0,8,100	./.	0/0:44,0:14:3.01:0,3,45	1/1:11,23:35:38.94:432,39,0	0/0:26,0:26:48.16:0,48,747	0/0:51,0:51:86.28:0,86,1381	1/1:24,0:22:6.42:40,6,0	0/1:32,1:33:9.33:9,0,864	0/1:29,2:30:6.36:6,0,772	0/0:13,0:11:8.93:0,9,115	1/1:38,0:37:19.23:127,19,0	1/1:24,0:24:32.80:242,33,0	1/1:26,0:26:16.99:230,17,0	0/0:41,0:41:28.70:0,29,847	0/0:23,1:25:13.36:0,13,653	0/1:44,7:51:37.09:37,0,1245	0/0:17,0:17:36.12:0,36,554	1/1:13,0:12:3.50:13,4,0	0/1:20,0:18:7.30:84,0,7	0/1:80,0:77:8.62:205,0,9	1/1:27,0:26:8.41:52,8,0	1/1:13,0:13:5.94:41,6,0	1/1:48,0:48:35.41:363,35,0	1/1:13,27:40:57.14:662,57,0	0/1:27,2:28:9.05:9,0,745	0/1:26,2:27:6.76:7,0,768	0/0:15,0:15:19.01:0,19,449
chr10	10206348	.	CTCCA	C	20714.22	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=8.275;DP=790;FS=4.968;HRun=0;HaplotypeScore=171.2951;InbreedingCoeff=0.9998;MQ=75.28;MQ0=1;MQRankSum=-6.436;QD=31.43;ReadPosRankSum=4.156;VQSLOD=4.3527;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,21:40:49.76:939,50,0	1/1:2,12:14:30.06:471,30,0	0/0:33,0:32:42.60:0,43,912	0/0:41,0:36:58.82:0,59,1272	0/0:19,0:19:51.18:0,51,1261	1/1:9,21:30:51.13:818,51,0	1/1:5,26:31:48.12:772,48,0	1/1:14,22:36:66.18:984,66,0	1/1:2,26:28:60.16:973,60,0	1/1:6,26:33:78.18:1174,78,0	1/1:3,19:22:54.10:842,54,0	1/1:5,19:24:60.20:1003,60,0	1/1:5,21:26:69.11:1091,69,0	1/1:10,13:23:45.10:692,45,0	1/1:15,29:44:75.17:1189,75,0	1/1:4,29:33:78.27:1304,78,0	1/1:4,21:26:51.64:854,52,0	1/1:8,21:29:57.19:953,57,0	1/1:9,19:28:54.16:824,54,0	1/1:6,17:23:44.96:657,45,0	1/1:4,20:24:36.12:602,36,0	1/1:4,17:21:60.08:867,60,0	1/1:10,11:21:42.12:653,42,0	1/1:14,14:28:41.52:490,42,0	0/0:38,0:38:84.25:0,84,1895	1/1:3,23:26:65.57:1065,66,0	1/1:10,21:31:54.18:903,54,0	1/1:2,15:17:39.06:594,39,0
chr10	10206381	.	TCATC	T	5006.18	PASS	AB=0.644;AC=13;AF=0.232;AN=56;BaseQRankSum=7.664;DP=821;FS=11.994;HRun=0;HaplotypeScore=228.3964;InbreedingCoeff=0.9028;MQ=60.92;MQ0=1;MQRankSum=-4.783;QD=25.03;ReadPosRankSum=1.161;VQSLOD=2.9934;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:22,16:40:31.39:617,31,0	0/0:17,0:17:36.11:0,36,831	0/0:34,0:27:45.07:0,45,839	0/0:39,0:37:57.20:0,57,1272	0/0:25,0:25:57.13:0,57,1125	0/0:34,0:33:69.17:0,69,1574	0/0:28,0:28:36.10:0,36,777	0/0:37,0:37:63.17:0,63,1206	0/0:36,0:36:90.25:0,90,2011	0/0:35,0:35:93.24:0,93,1980	0/0:24,0:24:63.15:0,63,1456	1/1:10,19:29:63.10:953,63,0	1/1:7,26:33:75.17:1155,75,0	1/1:6,18:24:48.16:789,48,0	0/0:39,0:39:78.27:0,78,1847	0/0:33,0:33:78.25:0,78,1816	0/0:29,0:29:47.77:0,48,1121	0/0:30,0:30:69.08:0,69,1469	0/0:25,0:24:39.12:0,39,832	0/0:22,0:22:57.13:0,57,1303	0/0:28,0:28:57.19:0,57,1302	1/1:11,13:24:33:482,33,0	1/1:6,15:21:39.12:619,39,0	0/1:12,15:27:15.07:392,0,15	0/0:30,0:31:72.15:0,72,1515	0/0:32,1:33:34.91:0,35,1702	0/0:28,0:28:48.16:0,48,1168	0/0:14,0:14:39.04:0,39,750
chr10	10206597	.	C	CCCAT	23875.87	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=1.385;DP=861;FS=6.565;HRun=0;HaplotypeScore=164.2830;InbreedingCoeff=0.9528;MQ=57.75;MQ0=4;MQRankSum=-4.388;QD=32.26;ReadPosRankSum=4.955;VQSLOD=4.3687;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,35:51:62.83:1408,63,0	1/1:10,0:10:12.04:229,12,0	0/0:28,0:23:32.29:0,32,433	0/0:48,0:36:8.47:0,8,827	0/0:29,0:29:66.21:0,66,1070	1/1:25,0:24:39.13:754,39,0	1/1:21,0:21:20.45:607,20,0	1/1:28,0:28:35.93:388,36,0	1/1:35,0:35:66.23:1264,66,0	1/1:33,0:32:63.14:1085,63,0	1/1:17,0:17:9.50:178,10,0	1/1:6,27:36:57.19:1412,57,0	1/1:8,32:41:87.30:2149,87,0	1/1:6,24:32:54.19:1334,54,0	1/1:36,0:36:60.21:1116,60,0	1/1:32,0:31:57.14:1050,57,0	1/1:22,0:22:30.10:568,30,0	1/1:37,0:37:57.14:991,57,0	1/1:19,0:19:36:680,36,0	1/1:19,8:28:45.10:958,45,0	1/1:55,0:55:57.15:1251,57,0	1/1:10,28:38:51.17:1241,51,0	1/1:6,15:23:33.11:762,33,0	1/1:5,33:40:68.45:1643,68,0	0/0:16,0:16:36.11:0,36,580	1/1:29,0:29:72.19:1306,72,0	1/1:30,0:30:63.22:1207,63,0	1/1:19,0:19:15.05:294,15,0
chr10	10206599	.	C	CATCT	23483.55	PASS	AB=1.000;AC=37;AF=0.661;AN=56;BaseQRankSum=7.860;DP=881;FS=2.459;HRun=0;HaplotypeScore=168.6112;InbreedingCoeff=0.1232;MQ=58.33;MQ0=4;MQRankSum=-4.268;QD=30.86;ReadPosRankSum=12.351;VQSLOD=3.5530;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:53,0:52:99:874,0,136	1/1:1,9:10:12.04:323,12,0	0/0:30,0:25:63.02:0,63,868	0/0:47,0:35:85.76:0,86,1290	0/0:26,0:26:72.02:0,72,1278	1/1:1,24:25:39.13:1050,39,0	1/1:6,19:25:38.12:902,38,0	0/1:29,0:29:75.70:76,0,124	1/1:1,35:36:66.23:1769,66,0	1/1:4,30:34:77.96:1682,78,0	1/1:4,12:18:9.46:240,9,0	0/1:37,0:37:55.67:863,0,56	0/1:43,0:42:44.62:1324,0,45	0/1:32,0:32:30.73:812,0,31	1/1:1,33:34:60.21:1574,60,0	1/1:1,28:28:57.19:1484,57,0	1/1:4,18:24:13.31:836,13,0	1/1:23,15:38:97.40:1733,97,0	0/1:19,0:19:99:360,0,115	0/1:30,0:30:99:576,0,125	0/1:54,0:54:99:693,0,118	0/1:38,0:37:81.74:757,0,82	0/1:24,0:24:29.90:462,0,30	0/1:41,0:41:5.39:989,0,5	0/0:17,0:17:45.12:0,45,756	1/1:2,28:31:90.18:2006,90,0	1/1:5,26:33:63.22:1697,63,0	1/1:1,20:22:15.05:404,15,0
chr10	10206600	.	A	ATCCA	24024.69	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=1.502;DP=890;FS=6.570;HRun=0;HaplotypeScore=173.8107;InbreedingCoeff=0.9536;MQ=58.40;MQ0=4;MQRankSum=-3.579;QD=31.28;ReadPosRankSum=5.519;VQSLOD=4.0271;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:53,0:52:62.83:1408,63,0	1/1:10,0:10:12.04:229,12,0	0/0:30,0:25:32.29:0,32,433	0/0:48,0:36:8.47:0,8,827	0/0:25,0:25:66.21:0,66,1070	1/1:27,0:26:39.13:754,39,0	1/1:24,0:24:26.45:694,26,0	1/1:28,0:29:35.93:388,36,0	1/1:35,0:35:66.23:1264,66,0	1/1:36,0:35:63.14:1085,63,0	1/1:18,0:18:9.46:178,9,0	1/1:36,0:36:57.19:1412,57,0	1/1:43,0:43:87.30:2149,87,0	1/1:32,0:32:54.19:1334,54,0	1/1:35,0:35:60.21:1116,60,0	1/1:29,0:28:57.14:1050,57,0	1/1:24,0:24:33.07:588,33,0	1/1:39,0:40:60.62:1034,61,0	1/1:21,0:21:36:680,36,0	1/1:31,0:31:45.10:958,45,0	1/1:37,18:56:57.15:1251,57,0	1/1:37,0:37:51.17:1241,51,0	1/1:24,0:24:33.11:762,33,0	1/1:42,0:42:68.45:1643,68,0	0/0:19,0:19:36.11:0,36,580	1/1:32,0:32:72.19:1306,72,0	1/1:34,0:34:63.22:1207,63,0	1/1:18,0:18:15.05:294,15,0
chr10	10206614	.	C	CCA	5757	PASS	AB=0.956;AC=25;AF=0.446;AN=56;BaseQRankSum=14.839;DP=831;FS=18.144;HRun=0;HaplotypeScore=205.5807;InbreedingCoeff=-0.6729;MQ=60.38;MQ0=3;MQRankSum=-2.233;QD=8.02;ReadPosRankSum=14.130;VQSLOD=1.8555;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:44,0:44:99:217,0,300	0/1:11,0:11:51.17:60,0,51	0/0:25,0:22:63.16:0,63,957	0/0:42,0:35:99:0,99,1446	0/0:24,0:24:72.23:0,72,1148	0/1:27,0:27:99:206,0,102	0/1:23,0:23:99:144,0,113	0/1:25,4:29:70.24:70,0,139	0/1:31,0:31:31.69:362,0,32	0/1:32,0:31:56.27:272,0,56	0/1:17,0:17:31.56:32,0,99	0/1:37,0:37:99:235,0,263	0/1:45,0:44:99:358,0,325	0/1:33,0:34:99:245,0,194	1/1:32,0:32:7.56:315,8,0	0/1:31,0:30:92.54:281,0,93	0/1:22,0:22:71.27:155,0,71	0/1:33,0:33:99:252,0,138	0/1:10,7:17:40.46:296,0,40	0/1:16,12:28:99:327,0,110	0/1:35,20:55:99:576,0,122	0/1:29,0:28:45.73:213,0,46	0/1:23,0:23:99:108,0,129	0/1:37,0:38:99:280,0,141	0/0:20,0:20:60.19:0,60,945	0/1:31,0:31:66.23:321,0,66	0/1:30,0:30:17:361,0,17	0/1:18,0:18:72.81:73,0,84
chr10	10206615	.	T	TCC	4380.59	PASS	AB=0.935;AC=19;AF=0.339;AN=56;BaseQRankSum=12.923;DP=840;FS=2.924;HRun=1;HaplotypeScore=216.4403;InbreedingCoeff=-0.1948;MQ=60.37;MQ0=3;MQRankSum=-5.023;QD=9.26;ReadPosRankSum=5.244;VQSLOD=1.8053;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:44:70.21:0,70,580	0/1:11,0:11:29.08:105,0,29	0/0:24,0:21:63.21:0,63,988	0/0:44,0:35:62:0,62,1430	0/0:23,0:23:69.24:0,69,1125	0/1:27,0:27:99:206,0,102	0/1:24,0:24:99:144,0,105	0/1:25,4:29:94.66:95,0,118	0/1:32,0:32:23.21:362,0,23	0/1:33,0:32:37.85:326,0,38	0/1:17,0:17:30.68:31,0,91	0/0:39,0:39:71.14:0,71,553	0/0:45,0:44:99:0,108,792	0/0:36,0:36:69.90:0,70,476	1/1:31,0:31:22.50:334,22,0	0/1:33,0:32:38.55:359,0,39	0/1:22,0:22:71.08:156,0,71	0/1:34,0:34:99:225,0,156	0/1:10,7:17:59.52:253,0,60	0/1:16,12:28:79.84:366,0,80	0/1:35,20:55:99:551,0,140	0/0:29,0:28:50.94:0,51,290	0/0:24,0:24:39.53:0,40,311	0/0:38,0:38:77.66:0,78,455	0/0:20,0:20:60.20:0,60,973	0/1:32,0:32:61.59:321,0,62	1/1:30,0:30:41.45:474,41,0	0/1:18,0:18:64.57:74,0,65
chr10	10207510	.	T	TAC	21338	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-14.418;DP=693;FS=2.793;HRun=0;HaplotypeScore=75.2085;InbreedingCoeff=0.9994;MQ=84.42;MQ0=1;MQRankSum=-5.402;QD=52.43;ReadPosRankSum=-0.390;VQSLOD=5.2114;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:62,0:62:99:0,184,2736	1/1:0,9:9:24.08:463,24,0	0/0:23,0:23:63.21:0,63,925	0/0:27,0:27:78.21:0,78,1049	0/0:25,0:25:75.25:0,75,1147	1/1:3,24:28:69.24:1333,69,0	1/1:0,28:28:78.27:1507,78,0	1/1:2,18:20:57.17:1046,57,0	1/1:0,22:22:66.23:1275,66,0	1/1:2,26:29:84.28:1588,84,0	1/1:0,17:17:45.15:869,45,0	0/0:22,0:22:63.21:0,63,964	0/0:20,0:20:60.20:0,60,917	0/0:22,0:22:66.19:0,66,968	1/1:2,25:27:78.27:1503,78,0	1/1:0,27:27:78.27:1506,78,0	1/1:1,35:35:90.31:1738,90,0	1/1:2,22:24:63.22:1217,63,0	1/1:3,20:23:66.22:1246,66,0	1/1:2,21:23:57.20:1101,57,0	1/1:0,44:45:99:2434,126,0	0/0:26,0:26:78.26:0,78,1195	0/0:16,0:16:42.14:0,42,643	0/0:28,0:28:84.29:0,84,1281	0/0:15,0:15:42.14:0,42,643	1/1:0,21:22:66.20:1240,66,0	1/1:2,16:19:42.14:807,42,0	1/1:0,8:8:24.08:464,24,0
chr10	10208142	.	GC	G	9386.36	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=8.891;DP=570;FS=1.031;HRun=6;HaplotypeScore=65.2835;InbreedingCoeff=0.9992;MQ=85.34;MQ0=0;MQRankSum=-3.486;QD=27.69;ReadPosRankSum=2.340;VQSLOD=5.4899;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:72.22:0,72,933	1/1:1,7:8:21.05:226,21,0	0/0:30,0:30:78.94:0,79,938	0/0:25,0:25:66:0,66,748	0/0:16,0:16:48.14:0,48,617	1/1:1,17:18:48.12:516,48,0	1/1:1,18:19:42.10:451,42,0	1/1:0,19:19:54.13:577,54,0	1/1:0,18:18:51.13:548,51,0	1/1:3,21:24:60.04:621,60,0	1/1:3,16:19:36.09:387,36,0	0/0:19,0:19:57.19:0,57,749	0/0:19,0:19:57.15:0,57,706	0/0:24,0:24:63.20:0,63,828	1/1:0,19:19:48.12:516,48,0	1/1:1,29:30:84.21:903,84,0	1/1:2,30:32:84.21:903,84,0	1/1:1,25:25:75.19:806,75,0	1/1:4,15:19:42.10:451,42,0	1/1:3,16:19:45.06:467,45,0	1/1:0,18:18:51.13:547,51,0	0/0:17,0:17:48.16:0,48,630	0/0:13,0:13:39.13:0,39,513	0/0:32,0:32:93.30:0,93,1224	0/0:12,0:12:33.10:0,33,421	1/1:1,19:20:57.04:597,57,0	1/1:2,20:22:54.13:580,54,0	1/1:0,9:9:27.07:290,27,0
chr10	10208521	.	GT	G	1938.85	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.490;DP=675;FS=6.931;HRun=3;HaplotypeScore=57.2698;InbreedingCoeff=0.9847;MQ=56.56;MQ0=41;MQRankSum=2.084;QD=26.93;ReadPosRankSum=1.475;VQSLOD=2.4312;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,117,1627	0/0:15,0:15:45.15:0,45,648	0/0:28,0:4:12:0,12,148	0/0:22,0:9:16.46:0,16,228	0/0:27,0:27:71.87:0,72,938	1/1:0,20:20:54.17:669,54,0	1/1:0,27:27:69.22:855,69,0	0/0:30,0:30:87.26:0,87,1211	1/1:2,23:25:45.14:557,45,0	0/0:33,0:33:96.30:0,96,1326	0/0:16,0:16:48.15:0,48,673	0/0:23,0:23:60.20:0,60,861	0/0:31,0:31:84.26:0,84,1169	0/0:19,0:19:54.17:0,54,755	0/0:30,0:30:87.26:0,87,1195	0/0:28,0:28:78.26:0,78,1123	0/0:23,0:23:66.22:0,66,949	0/0:14,0:14:33.07:0,33,434	0/0:25,0:18:54.09:0,54,690	0/0:23,0:23:69.19:0,69,937	0/0:27,0:27:78.25:0,78,1090	0/0:18,0:18:54.16:0,54,733	0/0:19,0:19:57.19:0,57,819	0/0:24,0:24:72.21:0,72,999	0/0:28,0:28:84.28:0,84,1199	0/0:21,0:21:60.16:0,60,812	0/0:28,0:27:81.23:0,81,1125	0/0:12,0:12:30.10:0,30,432
chr10	10209714	.	CTTAG	C	2372.28	PASS	AB=0.608;AC=7;AF=0.125;AN=56;BaseQRankSum=6.737;DP=721;FS=1.169;HRun=0;HaplotypeScore=129.7602;InbreedingCoeff=0.8347;MQ=64.26;MQ0=1;MQRankSum=-4.413;QD=30.03;ReadPosRankSum=-0.074;VQSLOD=3.6031;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,147,3839	0/0:11,0:11:30.10:0,30,800	0/0:27,0:19:42.14:0,42,1092	0/0:29,0:16:39.13:0,39,964	0/0:32,0:32:87.30:0,87,2315	0/0:17,0:17:45.15:0,45,1195	0/0:37,0:37:99:0,102,2653	0/1:11,20:29:58.09:841,0,58	0/0:28,0:28:78.27:0,78,2072	0/0:35,0:35:99:0,105,2784	0/0:16,0:16:48.16:0,48,1247	0/0:30,0:30:84.29:0,84,2226	0/0:36,0:36:99:0,108,2711	0/0:25,0:25:69.24:0,69,1834	0/0:31,0:31:90.31:0,90,2337	0/0:22,0:22:63.20:0,63,1577	0/0:22,0:22:66.23:0,66,1728	0/0:35,0:35:99:0,99,2537	1/1:3,12:13:27.09:504,27,0	1/1:0,11:11:21.07:392,21,0	1/1:4,18:22:42.14:784,42,0	0/0:22,0:22:66.23:0,66,1709	0/0:30,0:30:84.29:0,84,2179	0/0:35,0:35:99:0,99,2565	0/0:12,0:12:36.12:0,36,960	0/0:28,0:28:84.29:0,84,2220	0/0:20,0:20:60.21:0,60,1544	0/0:11,0:11:33.11:0,33,873
chr10	10211446	.	C	CTCT	4067.79	PASS	AB=0.877;AC=27;AF=0.482;AN=56;BaseQRankSum=6.648;DP=620;FS=101.010;HRun=0;HaplotypeScore=164.9990;InbreedingCoeff=0.7462;MQ=69.40;MQ0=5;MQRankSum=-3.702;QD=16.14;ReadPosRankSum=1.151;VQSLOD=-0.0150;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:96.60:0,97,1582	1/1:3,0:3:5.94:45,6,0	0/0:39,0:34:79.48:0,79,1110	0/0:27,0:22:56.36:0,56,790	0/0:18,0:18:51.16:0,51,835	1/1:9,9:21:37.94:630,38,0	1/1:6,3:16:18.95:191,19,0	0/0:39,0:37:99:0,100,794	1/1:4,10:17:16.97:429,17,0	1/1:8,11:21:32.64:417,33,0	1/1:5,1:6:10.22:139,10,0	0/0:32,0:32:84.19:0,84,1181	0/0:23,0:23:66.20:0,66,1002	0/0:27,0:27:69.03:0,69,975	1/1:27,6:38:15.01:506,15,0	0/1:5,7:12:5.83:253,0,6	1/1:12,5:27:27.11:407,27,0	1/1:11,5:20:3.92:429,4,0	0/0:29,0:28:33.24:0,33,399	0/1:17,0:15:20.44:62,0,20	0/1:20,0:20:13.70:14,0,38	0/0:20,0:19:35.95:0,36,524	0/0:17,0:17:45.14:0,45,691	0/0:24,0:24:69.18:0,69,1003	0/0:25,0:25:69.22:0,69,1118	1/1:10,1:12:18.14:170,18,0	1/1:5,3:13:15.44:231,15,0	1/1:4,4:8:9:146,9,0
chr10	10211661	.	G	GGTGTGTGTGTGTGTGTGT	8160.44	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=2.056;DP=607;FS=59.041;HRun=0;HaplotypeScore=266.3559;InbreedingCoeff=0.9463;MQ=61.73;MQ0=4;MQRankSum=-8.240;QD=28.24;ReadPosRankSum=-6.690;VQSLOD=0.5170;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,114,4277	1/1:7,0:8:9.82:285,10,0	0/0:36,0:17:32.87:0,33,806	0/0:20,0:12:29.33:0,29,565	0/0:15,0:15:45.09:0,45,1647	1/1:15,0:15:32.03:230,32,0	1/1:31,0:31:60.61:665,61,0	1/1:20,0:21:17.20:498,17,0	1/1:16,0:15:24.84:233,25,0	1/1:16,0:18:25.43:638,25,0	1/1:11,0:11:11.98:352,12,0	0/0:36,0:36:99:0,102,4462	0/0:28,0:28:81.71:0,82,3619	0/0:34,0:34:99:0,102,3406	1/1:18,1:22:49.17:1093,49,0	1/1:16,1:17:39.88:528,40,0	1/1:1,7:18:15.02:1024,15,0	1/1:4,8:21:10.70:516,11,0	1/1:8,0:17:35.43:470,35,0	1/1:12,0:21:41.46:526,41,0	1/1:11,0:24:14.21:175,14,0	0/0:19,0:19:57.15:0,57,2180	0/0:11,0:11:30.07:0,30,1213	0/0:39,0:38:99:0,114,4483	0/0:40,0:40:99:0,117,5024	1/1:12,0:12:13.44:598,13,0	1/1:9,0:10:11.68:89,12,0	1/1:2,0:6:3.90:240,4,0
chr10	10212681	.	ATT	A	9431.16	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-17.335;DP=635;FS=4.956;HRun=11;HaplotypeScore=102.7990;InbreedingCoeff=0.9778;MQ=72.27;MQ0=2;MQRankSum=-0.182;QD=26.42;ReadPosRankSum=1.879;VQSLOD=4.9085;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:6,1:48:34.57:0,35,253	1/1:0,5:5:15.04:160,15,0	0/0:11,0:9:8.68:0,9,68	0/0:16,0:12:9.09:0,9,95	0/0:2,0:22:44.92:0,45,154	1/1:1,20:21:51.11:543,51,0	1/1:1,18:19:42.10:447,42,0	1/1:7,27:34:81.13:846,81,0	1/1:6,26:32:72.17:766,72,0	1/1:3,26:28:74.83:797,75,0	1/1:0,11:11:33.08:351,33,0	0/0:2,0:24:49.63:0,50,169	0/0:3,0:27:55.22:0,55,224	0/0:4,0:17:40.31:0,40,143	1/1:2,21:23:60.13:639,60,0	1/1:0,27:26:78.20:830,78,0	1/1:6,20:26:54.10:575,54,0	1/1:1,17:18:39.10:415,39,0	1/1:5,20:26:54.08:630,54,0	1/1:1,23:24:69.14:721,69,0	1/1:1,13:14:39.09:415,39,0	0/0:4,2:42:25.83:0,26,241	0/0:5,0:19:41.40:0,41,181	0/0:4,0:28:55.30:0,55,196	0/0:2,0:24:52.28:0,52,180	1/1:2,19:21:14.96:561,15,0	1/1:2,15:17:39.07:415,39,0	1/1:0,10:10:30.08:319,30,0
chr10	10212751	.	GGTGT	G	4924.43	PASS	AB=0.803;AC=22;AF=0.423;AN=52;BaseQRankSum=4.779;DP=645;FS=0.443;HRun=0;HaplotypeScore=146.2411;InbreedingCoeff=0.3396;MQ=65.65;MQ0=18;MQRankSum=0.443;QD=13.20;ReadPosRankSum=3.786;VQSLOD=4.0329;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:21,10:31:38.58:473,39,0	0/1:6,2:8:49.65:80,0,50	./.	./.	0/0:11,0:10:9.03:0,9,214	0/0:15,0:13:22.87:0,23,393	0/0:24,0:24:33.10:0,33,704	0/0:28,0:28:21.06:0,21,330	0/1:30,0:33:5.40:5,0,850	0/0:16,0:17:23.45:0,23,187	0/1:4,0:5:4.85:25,0,5	1/1:12,11:23:36.12:567,36,0	1/1:17,11:29:45.11:641,45,0	1/1:11,21:32:63.21:992,63,0	0/1:12,1:21:38.69:39,0,130	0/1:27,3:36:66.72:67,0,238	0/1:17,2:28:84.23:84,0,212	0/1:12,1:15:34.53:36,0,35	0/0:14,0:14:6.02:0,6,99	0/0:9,0:9:15:0,15,178	0/0:33,0:30:37.10:0,37,921	1/1:15,12:27:33.94:541,34,0	1/1:9,12:21:33.58:520,34,0	1/1:23,18:41:2.88:790,3,0	0/0:16,0:16:24.08:0,24,489	0/0:14,0:15:13.95:0,14,69	0/0:12,0:13:8.17:0,8,36	0/1:16,1:20:37.02:64,0,37
chr10	10213112	.	G	GC	21675.58	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=0.782;DP=851;FS=3.313;HRun=0;HaplotypeScore=93.1603;InbreedingCoeff=0.9992;MQ=77.38;MQ0=0;MQRankSum=-2.146;QD=42.92;ReadPosRankSum=1.440;VQSLOD=5.1507;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:57:99:0,168,2239	1/1:1,11:12:33.11:527,33,0	0/0:17,0:17:38.23:0,38,485	0/0:18,0:18:48.04:0,48,616	0/0:20,0:20:57.11:0,57,741	1/1:2,25:27:63.21:1006,63,0	1/1:0,29:29:81.28:1294,81,0	1/1:0,37:37:99:1703,111,0	1/1:1,31:32:81.28:1294,81,0	1/1:0,41:41:99:1921,123,0	1/1:0,7:7:21.07:335,21,0	0/0:38,0:38:99:0,111,1519	0/0:42,0:42:99:0,120,1646	0/0:45,0:45:99:0,135,1852	1/1:0,41:41:99:1725,108,0	1/1:0,37:37:99:1629,102,0	1/1:0,40:40:99:1744,111,0	1/1:2,26:28:69.24:1102,69,0	1/1:1,25:26:69.23:1088,69,0	1/1:0,12:12:30.03:447,30,0	1/1:2,54:56:99:2301,144,0	0/0:21,0:21:60.20:0,60,836	0/0:24,0:24:69.16:0,69,908	0/0:40,0:40:99:0,120,1602	0/0:24,0:24:72.23:0,72,992	1/1:0,43:43:99:1940,129,0	1/1:1,26:28:75.26:1189,75,0	1/1:0,9:9:27.09:430,27,0
chr10	10213329	.	CAT	C	5781.85	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=1.005;DP=572;FS=10.221;HRun=0;HaplotypeScore=82.5226;InbreedingCoeff=0.9813;MQ=85.14;MQ0=17;MQRankSum=-3.233;QD=20.95;ReadPosRankSum=0.807;VQSLOD=4.8723;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:65.68:0,66,510	1/1:6,0:6:17.98:149,18,0	0/0:68,0:38:66.67:0,67,636	0/0:75,0:32:53.70:0,54,456	0/0:13,0:13:32.74:0,33,265	1/1:22,0:21:56.91:468,57,0	1/1:18,0:17:30.10:355,30,0	1/1:24,7:31:80.97:719,81,0	1/1:12,0:12:35.93:292,36,0	1/1:20,0:20:37.97:382,38,0	1/1:8,0:8:16.43:142,16,0	0/0:11,0:11:32.94:0,33,270	0/0:12,0:12:29.96:0,30,248	0/0:17,0:17:38.94:0,39,321	1/1:19,0:19:50.93:420,51,0	1/1:10,0:10:29.96:248,30,0	1/1:20,0:20:53.46:403,53,0	1/1:16,0:16:44.80:346,45,0	1/1:17,0:17:50.98:443,51,0	1/1:7,0:7:20.98:175,21,0	1/1:31,0:32:47.17:449,47,0	0/0:20,0:20:56.90:0,57,468	0/0:6,0:6:14.98:0,15,124	0/0:23,0:23:59.88:0,60,487	0/0:24,0:24:63.28:0,63,470	1/1:17,0:17:51.04:465,51,0	1/1:13,0:13:32.59:257,33,0	1/1:8,0:5:6.92:68,7,0
chr10	10216285	.	AGCAG	A	3924.85	PASS	AB=1.000;AC=33;AF=0.589;AN=56;BaseQRankSum=6.084;DP=544;FS=48.309;HRun=0;HaplotypeScore=100.8503;InbreedingCoeff=0.6939;MQ=67.00;MQ0=1;MQRankSum=-6.898;QD=11.51;ReadPosRankSum=-1.801;VQSLOD=0.5877;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:24.06:0,24,436	1/1:3,9:12:15.05:227,15,0	0/0:12,0:8:9:0,9,144	0/0:20,0:16:23.99:0,24,300	0/0:4,0:4:3:0,3,25	1/1:7,13:20:12.04:150,12,0	1/1:6,32:37:8.33:58,8,0	1/1:5,6:10:9:121,9,0	1/1:4,12:16:18.06:257,18,0	1/1:6,16:22:42.02:530,42,0	1/1:4,10:14:8.98:102,9,0	0/0:33,0:33:84.29:0,84,1596	0/0:23,0:23:57.19:0,57,1015	0/0:26,0:26:69.23:0,69,1351	1/1:7,16:23:11.75:132,12,0	1/1:5,18:23:27.02:340,27,0	1/1:7,18:25:9.03:137,9,0	1/1:6,26:32:21.07:328,21,0	0/1:17,0:17:13.31:293,0,13	1/1:4,0:4:9.02:120,9,0	0/1:39,0:37:42.63:576,0,43	0/0:8,0:8:9.03:0,9,196	0/0:7,0:6:9.03:0,9,190	0/0:55,0:55:99:0,123,2475	0/1:5,0:5:0:0,0,0	1/1:8,14:22:27.02:357,27,0	1/1:3,11:14:8.60:147,9,0	1/1:2,2:4:3.01:50,3,0
chr10	10217707	.	T	TA	20802.94	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-14.616;DP=706;FS=3.831;HRun=0;HaplotypeScore=64.2702;InbreedingCoeff=0.9993;MQ=90.16;MQ0=0;MQRankSum=-5.051;QD=44.17;ReadPosRankSum=3.475;VQSLOD=5.2822;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:80.21:0,80,1539	1/1:0,8:8:24.08:384,24,0	0/0:26,0:26:78.24:0,78,1058	0/0:28,0:28:81.09:0,81,1085	1/1:0,27:27:75.26:1199,75,0	1/1:0,27:27:75.26:1199,75,0	1/1:1,23:24:63.21:998,63,0	1/1:1,24:25:75.24:1171,75,0	1/1:0,36:36:96.33:1535,96,0	1/1:0,41:41:99:1913,123,0	1/1:1,16:17:45.15:720,45,0	0/0:17,0:17:51.17:0,51,713	0/0:25,0:25:75.22:0,75,1029	0/0:28,0:28:84.26:0,84,1157	1/1:0,31:31:87.30:1390,87,0	1/1:1,33:34:84.04:1343,84,0	1/1:0,15:15:42.14:671,42,0	1/1:1,21:22:54.18:862,54,0	1/1:1,11:12:36.12:569,36,0	1/1:0,27:27:81.28:1295,81,0	1/1:0,31:31:87.30:1391,87,0	0/0:37,0:37:99:0,111,1552	0/0:19,0:19:57.19:0,57,797	0/0:16,0:16:48.16:0,48,670	1/1:0,31:31:87.30:1391,87,0	1/1:1,22:23:63.21:1008,63,0	1/1:0,30:31:87.30:1381,87,0	1/1:0,9:9:24.08:384,24,0
chr10	10220326	.	C	CT	752.66	PASS	AB=0.909;AC=7;AF=0.125;AN=56;BaseQRankSum=6.883;DP=702;FS=74.258;HRun=0;HaplotypeScore=97.7294;InbreedingCoeff=0.8367;MQ=89.52;MQ0=0;MQRankSum=-9.366;QD=14.76;ReadPosRankSum=-4.915;VQSLOD=0.7075;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,123,1647	0/0:12,0:12:33.11:0,33,461	0/0:25,0:25:69.20:0,69,945	0/0:34,0:34:93.27:0,93,1251	0/0:25,0:25:75.25:0,75,1047	0/0:15,0:15:45.13:0,45,611	0/0:37,0:37:99:0,108,1484	1/1:14,5:19:54.11:455,54,0	0/0:30,0:30:90.30:0,90,1257	0/0:32,0:32:93.31:0,93,1299	0/0:14,0:14:39.11:0,39,525	0/0:34,0:34:96.32:0,96,1337	0/0:31,0:31:87.29:0,87,1208	0/0:24,0:24:66.22:0,66,918	0/0:31,0:31:93.30:0,93,1277	0/0:32,0:32:96.31:0,96,1324	0/0:30,0:30:90.26:0,90,1220	0/0:30,0:30:84.28:0,84,1173	1/1:6,0:8:17.55:155,18,0	0/1:9,1:10:14.54:132,0,15	1/1:7,7:14:17.74:158,18,0	0/0:25,0:25:72.24:0,72,1005	0/0:14,0:14:42.14:0,42,585	0/0:33,0:33:93.31:0,93,1298	0/0:18,0:18:54.15:0,54,732	0/0:39,0:39:99:0,108,1509	0/0:23,0:23:66.22:0,66,922	0/0:19,0:19:54.18:0,54,752
chr10	10220592	.	GC	G	8375.29	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-9.258;DP=628;FS=4.468;HRun=9;HaplotypeScore=88.8663;InbreedingCoeff=0.9980;MQ=79.44;MQ0=2;MQRankSum=-3.259;QD=19.39;ReadPosRankSum=2.571;VQSLOD=5.3721;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:3,0:30:57.04:0,57,299	1/1:0,7:7:20.97:184,21,0	0/0:28,0:27:48:0,48,492	0/0:18,0:17:21.95:0,22,243	1/1:1,0:17:30.55:90,31,0	1/1:1,21:22:51.03:467,51,0	1/1:3,20:23:53.96:485,54,0	1/1:10,18:28:50.99:457,51,0	1/1:2,18:20:45.02:412,45,0	1/1:2,23:25:69.02:627,69,0	1/1:2,16:18:41.98:376,42,0	0/0:7,0:32:71.56:0,72,394	0/0:5,0:21:45.98:0,46,281	0/0:1,0:12:25.72:0,26,139	1/1:4,21:26:47.06:418,47,0	1/1:3,29:32:75.04:686,75,0	1/1:4,35:39:52.41:734,52,0	1/1:3,21:24:54.02:494,54,0	1/1:6,17:23:51.02:467,51,0	1/1:0,20:20:53.97:484,54,0	1/1:3,24:27:57.03:522,57,0	0/0:7,0:20:38.08:0,38,297	0/0:3,0:12:23.05:0,23,145	0/0:5,0:23:47.01:0,47,262	1/1:1,0:19:36.67:108,37,0	1/1:2,22:24:65.99:596,66,0	1/1:2,20:22:54.03:494,54,0	1/1:2,12:14:30.01:275,30,0
chr10	10221986	.	A	ACTC	2647.22	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=2.577;DP=585;FS=4.342;HRun=0;HaplotypeScore=106.4207;InbreedingCoeff=0.9752;MQ=64.24;MQ0=7;MQRankSum=-8.045;QD=33.51;ReadPosRankSum=-3.359;VQSLOD=2.8912;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:82.50:0,82,1297	0/0:8,0:8:21.07:0,21,345	0/0:66,0:39:69.87:0,70,1343	0/0:74,0:35:48.73:0,49,834	0/0:10,0:10:15.03:0,15,217	0/0:21,0:21:63.22:0,63,1046	0/0:13,0:13:36.08:0,36,559	1/1:13,12:20:42.10:803,42,0	0/0:21,0:21:57.19:0,57,948	0/0:12,0:12:33.11:0,33,523	0/0:8,0:8:21.07:0,21,347	0/0:23,0:23:69.24:0,69,1137	0/0:18,0:18:51.17:0,51,846	0/0:14,0:14:42.10:0,42,604	0/0:18,0:18:54.18:0,54,896	0/0:19,0:19:45.15:0,45,746	0/0:23,0:23:63.15:0,63,1016	0/0:28,0:27:78.19:0,78,1223	1/1:4,8:12:24.03:514,24,0	1/1:5,10:15:39.08:767,39,0	1/1:2,25:27:35.83:722,36,0	0/0:11,0:11:27.02:0,27,413	0/0:7,0:7:21.07:0,21,343	0/0:32,0:32:90.31:0,90,1478	0/0:14,0:14:36.12:0,36,577	0/0:12,0:12:30.10:0,30,494	0/0:22,0:22:66.23:0,66,1080	0/0:3,0:3:9.03:0,9,150
chr10	10221997	.	CCTCT	C	1866.98	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=6.806;DP=649;FS=0.577;HRun=0;HaplotypeScore=121.7754;InbreedingCoeff=0.9515;MQ=62.18;MQ0=7;MQRankSum=-6.437;QD=17.45;ReadPosRankSum=-2.517;VQSLOD=3.1415;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:78.22:0,78,1647	0/0:7,0:7:21.05:0,21,442	0/0:67,0:35:35.42:0,35,514	0/0:81,0:36:52.37:0,52,687	1/1:5,4:9:5.95:102,6,0	0/0:21,0:22:56.97:0,57,1314	0/0:12,0:12:26.79:0,27,555	1/1:9,18:21:35.59:550,36,0	0/0:24,0:24:60.21:0,60,1455	0/0:14,0:17:41.40:0,41,832	0/0:11,0:11:26.29:0,26,534	0/0:24,0:24:48.13:0,48,1074	0/0:22,0:22:57.18:0,57,1313	0/0:13,0:13:33.11:0,33,777	0/0:23,0:23:66.23:0,66,1593	0/0:24,0:24:60.17:0,60,1309	0/0:31,0:32:81.54:0,82,1834	0/0:26,0:25:57.19:0,57,1298	1/1:8,3:10:17.99:245,18,0	1/1:4,14:18:32.98:461,33,0	1/1:18,8:26:20.99:284,21,0	0/0:12,0:12:30.07:0,30,578	0/0:8,0:8:24.08:0,24,527	0/0:37,0:38:98.42:0,98,2286	1/1:2,13:16:24.08:408,24,0	0/0:11,0:13:29.87:0,30,551	0/0:25,0:25:68.38:0,68,1438	0/0:2,0:3:5.81:0,6,88
chr10	10222329	.	G	GCACA	2218.75	PASS	AB=0.792;AC=30;AF=0.600;AN=50;BaseQRankSum=-1.517;DP=486;FS=11.826;HRun=0;HaplotypeScore=99.2390;InbreedingCoeff=0.6893;MQ=58.04;MQ0=6;MQRankSum=-0.224;QD=8.01;ReadPosRankSum=-1.359;VQSLOD=0.9647;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:22.48:0,22,426	1/1:9,0:9:3.01:43,3,0	./.	./.	1/1:14,0:14:9.02:107,9,0	0/0:13,0:21:11.70:0,12,111	0/0:6,0:12:15.85:0,16,127	1/1:36,0:36:23.86:153,24,0	0/0:6,0:8:14.96:0,15,129	1/1:24,0:23:5.39:213,5,0	./.	0/0:10,0:11:12.03:0,12,166	0/0:9,0:13:7.83:0,8,98	0/0:8,0:9:15.01:0,15,167	1/1:8,3:14:3.01:70,3,0	1/1:9,3:15:17.53:304,18,0	0/1:17,10:31:23.39:215,0,23	1/1:12,10:25:19.72:451,20,0	1/1:12,0:12:8.99:101,9,0	1/1:20,0:20:15.01:159,15,0	1/1:29,0:29:18:210,18,0	0/0:10,0:11:11.21:0,11,65	0/1:7,0:8:2.28:7,0,2	0/0:30,0:32:39.30:0,39,463	1/1:17,0:17:8.86:66,9,0	1/1:9,0:9:8.92:82,9,0	1/1:6,1:10:12.62:153,13,0	1/1:1,2:3:3.01:71,3,0
chr10	10222539	.	AACACAC	A	1183.78	PASS	AB=1.000;AC=30;AF=0.714;AN=42;BaseQRankSum=3.263;DP=435;FS=1.892;HRun=0;HaplotypeScore=95.6802;InbreedingCoeff=0.3668;MQ=61.23;MQ0=6;MQRankSum=-1.827;QD=4.38;ReadPosRankSum=-0.164;VQSLOD=1.8682;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:28:8.04:148,0,8	./.	./.	./.	0/0:18,0:18:3.01:0,3,59	1/1:5,0:9:5.56:83,6,0	1/1:15,0:14:2.88:45,3,0	0/0:8,0:8:3.01:0,3,75	1/1:9,0:13:3.37:42,3,0	0/1:17,0:17:0.14:0,0,0	1/1:10,0:9:3.01:53,3,0	./.	1/1:14,3:15:3:60,3,0	1/1:8,5:13:6.01:94,6,0	1/1:16,0:16:2.64:59,3,0	1/1:6,5:11:6.02:121,6,0	1/1:21,6:27:4.63:96,5,0	1/1:21,1:23:9.35:166,9,0	0/0:19,0:19:2.18:0,2,57	0/0:12,0:12:9.01:0,9,129	0/0:19,0:23:14.75:0,15,163	./.	./.	1/1:18,3:21:7.36:106,7,0	1/1:14,1:16:6.02:102,6,0	1/1:16,0:17:2.96:42,3,0	1/1:11,6:16:5.76:94,6,0	./.
chr10	10222968	.	AGGCCCAGAGGACGTTCCCG	A	4148.36	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=9.976;DP=527;FS=0.628;HRun=0;HaplotypeScore=259.9856;InbreedingCoeff=0.9686;MQ=89.29;MQ0=0;MQRankSum=-6.624;QD=63.82;ReadPosRankSum=-1.469;VQSLOD=2.6245;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,117,9957	0/0:4,0:4:12.04:0,12,1107	0/0:28,0:27:76.47:0,76,4580	0/0:16,0:16:45.15:0,45,2738	0/0:13,0:13:39.13:0,39,2960	0/0:17,0:17:51.18:0,51,4323	0/0:19,0:19:54.17:0,54,4302	1/1:10,14:24:41.95:1358,42,0	0/0:11,0:11:33.11:0,33,2797	0/0:25,0:25:69.24:0,69,5899	0/0:13,0:13:39.13:0,39,3111	0/0:18,0:18:54.17:0,54,4378	0/0:25,0:25:75.26:0,75,6698	0/0:25,0:25:75.26:0,75,6591	0/0:13,0:13:39.13:0,39,2879	0/0:13,0:13:39.13:0,39,3423	0/0:32,0:32:96.30:0,96,7896	0/0:28,0:28:84.26:0,84,6627	1/1:3,13:16:38.95:1010,39,0	1/1:3,8:11:15.05:815,15,0	1/1:5,9:14:18.06:966,18,0	0/0:10,0:10:30.10:0,30,2604	0/0:13,0:13:39.13:0,39,2875	0/0:32,0:31:96.33:0,96,8276	0/0:20,0:20:60.20:0,60,4780	0/0:25,0:25:75.24:0,75,5897	0/0:20,0:20:57.18:0,57,4167	0/0:3,0:3:9.03:0,9,764
chr10	10223171	.	AT	A	2253.29	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=10.448;DP=591;FS=5.166;HRun=3;HaplotypeScore=66.2946;InbreedingCoeff=0.9744;MQ=87.28;MQ0=0;MQRankSum=-0.997;QD=31.74;ReadPosRankSum=-3.521;VQSLOD=2.1397;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,117,1572	0/0:4,0:4:12.04:0,12,173	0/0:35,0:31:68.86:0,69,865	0/0:27,0:26:60.62:0,61,765	0/0:24,0:24:72.20:0,72,977	0/0:27,0:27:78.25:0,78,1099	0/0:29,0:29:87.17:0,87,1075	1/1:1,24:25:72.18:848,72,0	0/0:7,0:7:21.07:0,21,302	0/0:18,0:18:54.16:0,54,725	0/0:17,0:17:48.15:0,48,672	0/0:20,0:20:57.18:0,57,803	0/0:18,0:18:54.17:0,54,759	0/0:22,0:22:66.19:0,66,911	0/0:13,0:13:39.13:0,39,561	0/0:13,0:13:39.12:0,39,545	0/0:49,0:49:99:0,141,1894	0/0:30,0:30:90.23:0,90,1230	1/1:0,19:19:57.13:657,57,0	1/1:0,11:11:30.05:352,30,0	1/1:0,16:16:45.14:556,45,0	0/0:21,0:21:60.20:0,60,863	0/0:22,0:22:57.16:0,57,765	0/0:22,0:22:63.20:0,63,881	0/0:15,0:15:45.15:0,45,647	0/0:25,0:25:75.25:0,75,1064	0/0:20,0:19:60.18:0,60,824	0/0:3,0:3:9.03:0,9,128
chr10	10232238	.	GA	G	2087.71	PASS	AC=14;AF=0.269;AN=52;BaseQRankSum=2.936;DP=549;FS=2.782;HRun=3;HaplotypeScore=59.9877;InbreedingCoeff=0.9679;MQ=36.19;MQ0=111;MQRankSum=0.267;QD=14.20;ReadPosRankSum=3.043;VQSLOD=2.8131;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,32:30:39.08:465,39,0	0/0:9,0:9:24.08:0,24,344	./.	./.	0/0:23,0:20:29.87:0,30,287	0/0:22,0:14:27.04:0,27,347	0/0:21,0:15:42.07:0,42,525	0/0:10,0:7:21.07:0,21,296	0/0:10,0:7:18.06:0,18,258	0/0:25,0:22:57.19:0,57,819	0/0:6,0:6:12.04:0,12,166	1/1:0,23:19:42.04:520,42,0	1/1:1,16:14:24.07:293,24,0	1/1:0,21:17:33.10:408,33,0	0/0:25,0:22:54.14:0,54,753	0/0:14,0:12:30:0,30,367	0/0:33,0:25:45.11:0,45,622	0/0:29,0:28:60.16:0,60,840	0/0:19,0:14:33.08:0,33,439	0/0:27,0:26:66.01:0,66,831	0/0:33,0:21:48.10:0,48,670	1/1:2,15:16:9.03:111,9,0	1/1:0,14:14:9.02:108,9,0	1/1:2,21:17:30.09:372,30,0	0/0:23,0:20:32.98:0,33,404	0/0:18,0:14:39.13:0,39,560	0/0:22,0:20:48.16:0,48,687	0/0:8,0:7:21.07:0,21,302
chr10	10232683	.	GTGTA	G	10450.04	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-17.407;DP=1099;FS=4.378;HRun=0;HaplotypeScore=338.2755;InbreedingCoeff=1.0000;MQ=60.26;MQ0=3;MQRankSum=-1.496;QD=36.67;ReadPosRankSum=8.288;VQSLOD=4.0149;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,40:49:41.30:1265,41,0	0/0:20,0:20:60.19:0,60,1465	0/0:47,0:31:81.15:0,81,1627	0/0:53,0:51:99:0,127,2657	0/0:37,0:37:99:0,105,2460	0/0:26,0:26:72.22:0,72,1729	0/0:44,0:44:99:0,112,2502	0/0:60,0:60:99:0,160,3708	0/0:47,0:47:99:0,132,3180	0/0:41,0:41:99:0,123,3020	0/0:14,0:14:39.13:0,39,929	1/1:1,45:46:99:1932,102,0	1/1:4,38:43:96.19:1814,96,0	1/1:1,43:44:96.33:1813,96,0	0/0:47,0:47:99:0,129,2975	0/0:48,0:48:99:0,141,3421	0/0:24,0:24:66.23:0,66,1663	0/0:35,0:35:97.50:0,97,2116	0/0:27,0:27:66.22:0,66,1484	0/0:39,0:39:99:0,108,2534	0/0:76,0:76:99:0,217,5385	1/1:1,28:29:63.22:1190,63,0	1/1:0,28:28:54.19:1019,54,0	1/1:1,44:45:74.87:1418,75,0	0/0:41,0:41:99:0,108,2616	0/0:38,0:38:99:0,111,2799	0/0:27,0:27:81.23:0,81,1796	0/0:22,0:22:66.22:0,66,1493
chr10	10233015	.	T	TA	23259.24	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-17.165;DP=858;FS=9.734;HRun=2;HaplotypeScore=78.0080;InbreedingCoeff=0.9999;MQ=80.73;MQ0=0;MQRankSum=-3.920;QD=39.69;ReadPosRankSum=4.609;VQSLOD=4.7772;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,59:64:99:2467,175,0	1/1:1,18:19:51.13:710,51,0	0/0:27,0:26:69.21:0,69,839	0/0:26,0:25:66.08:0,66,799	0/0:30,0:30:81.24:0,81,990	1/1:0,26:26:75.25:1079,75,0	1/1:1,31:32:87.29:1252,87,0	0/0:40,0:40:99:0,114,1345	1/1:1,37:38:99:1555,108,0	1/1:1,33:34:99:1400,99,0	1/1:0,16:16:48.03:641,48,0	1/1:1,29:30:84.28:1209,84,0	1/1:0,27:27:78.26:1123,78,0	1/1:0,27:27:75.25:1080,75,0	1/1:0,41:41:99:1685,117,0	1/1:1,29:30:81.27:1166,81,0	1/1:1,40:41:99:1680,117,0	1/1:0,24:24:60.20:864,60,0	0/0:19,0:19:54.01:0,54,632	0/0:45,0:45:99:0,126,1562	0/0:56,0:56:99:0,159,1944	1/1:1,22:23:66.22:942,66,0	1/1:2,19:21:53.95:777,54,0	1/1:1,21:22:63.21:907,63,0	0/0:29,0:29:84.22:0,84,994	1/1:0,26:26:75.25:1080,75,0	1/1:1,29:30:84.28:1209,84,0	1/1:0,15:15:30.10:432,30,0
chr10	10234592	.	TG	T	22345.42	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=4.462;DP=606;FS=0.591;HRun=1;HaplotypeScore=130.8190;InbreedingCoeff=0.9662;MQ=85.99;MQ0=4;MQRankSum=-10.446;QD=39.62;ReadPosRankSum=6.782;VQSLOD=3.8889;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,46:46:99:1844,132,0	1/1:0,8:8:18.53:252,19,0	0/0:21,0:21:63.21:0,63,954	0/0:21,0:21:63.13:0,63,898	1/1:0,19:19:54.18:754,54,0	1/1:0,15:15:45.15:629,45,0	1/1:0,24:24:66.22:923,66,0	1/1:0,24:23:62.35:859,62,0	1/1:0,25:25:72.24:1007,72,0	1/1:0,25:25:75.24:1030,75,0	1/1:0,4:4:9.03:126,9,0	1/1:0,22:21:54.18:753,54,0	1/1:1,26:27:78.20:1086,78,0	1/1:0,18:18:54.18:755,54,0	1/1:0,22:22:57.19:796,57,0	1/1:0,15:15:42.14:587,42,0	1/1:0,28:28:81.27:1133,81,0	1/1:0,31:31:93.31:1298,93,0	1/1:0,18:18:54.18:752,54,0	1/1:0,14:14:39.13:545,39,0	1/1:0,46:45:99:1803,129,0	1/1:0,23:23:69.23:965,69,0	1/1:0,19:18:51.17:712,51,0	1/1:0,31:31:90.30:1258,90,0	1/1:0,17:17:48.16:671,48,0	1/1:0,15:15:45.15:630,45,0	1/1:0,20:20:60.20:838,60,0	1/1:0,8:8:24.08:336,24,0
chr10	10235122	.	TA	T	5696.21	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=11.558;DP=543;FS=3.149;HRun=1;HaplotypeScore=54.5996;InbreedingCoeff=0.9453;MQ=89.00;MQ0=0;MQRankSum=-0.945;QD=39.83;ReadPosRankSum=3.016;VQSLOD=5.5118;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,29:29:81.27:1133,81,0	0/0:5,0:5:15.05:0,15,239	0/0:22,0:22:66.16:0,66,987	0/0:17,0:17:48.16:0,48,765	0/0:10,0:10:27.09:0,27,432	0/0:19,0:19:57.19:0,57,905	0/0:27,0:27:81.28:0,81,1295	0/0:18,0:18:54.17:0,54,816	0/0:37,0:37:99:0,111,1768	0/0:17,0:17:51.12:0,51,726	0/0:2,0:2:3.01:0,3,48	1/1:1,34:35:99:1459,105,0	1/1:0,18:18:48.16:671,48,0	1/1:0,22:22:66.22:922,66,0	0/0:24,0:24:72.23:0,72,1126	0/0:20,0:20:60.20:0,60,959	0/0:27,0:27:81.28:0,81,1295	0/0:26,0:26:78.27:0,78,1243	0/0:21,0:21:63.21:0,63,1000	0/0:9,0:9:27.09:0,27,432	0/0:39,0:39:99:0,117,1863	1/1:0,8:8:24.08:336,24,0	1/1:0,2:2:6.02:84,6,0	1/1:0,29:29:78.26:1091,78,0	0/0:16,0:16:48.15:0,48,745	0/0:21,0:21:63.21:0,63,1005	0/0:16,0:16:48.16:0,48,765	0/0:7,0:7:21.07:0,21,336
chr10	10235644	.	C	CTTT	6758.79	PASS	AB=0.842;AC=53;AF=0.946;AN=56;BaseQRankSum=-4.064;DP=516;FS=10.114;HRun=12;HaplotypeScore=77.8574;InbreedingCoeff=-0.0556;MQ=58.66;MQ0=4;MQRankSum=-1.865;QD=13.10;ReadPosRankSum=1.604;VQSLOD=2.0611;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:10,6:30:45.07:616,45,0	1/1:1,3:7:13.29:198,13,0	0/1:19,0:12:22.28:22,0,71	0/1:19,0:11:11.97:12,0,125	1/1:12,4:20:12.26:110,12,0	1/1:6,13:21:21.03:304,21,0	1/1:3,13:22:42.03:589,42,0	1/1:16,3:25:17.07:206,17,0	1/1:5,6:13:6.02:95,6,0	1/1:6,2:16:23.77:304,24,0	1/1:16,0:16:21.36:230,21,0	0/1:7,4:19:16.25:141,0,16	1/1:2,2:9:6.02:98,6,0	1/1:7,0:18:12.62:138,13,0	1/1:2,17:21:26.68:397,27,0	1/1:6,1:9:15.03:224,15,0	1/1:6,14:21:24.08:428,24,0	1/1:4,9:16:12.25:178,12,0	1/1:12,1:18:22.03:210,22,0	1/1:14,5:24:16.11:190,16,0	1/1:2,0:4:3.48:44,3,0	1/1:9,2:23:21.54:297,22,0	1/1:10,7:28:21.02:285,21,0	1/1:1,3:13:18.04:246,18,0	1/1:16,7:27:6.01:71,6,0	1/1:3,11:19:38.76:470,39,0	1/1:10,17:28:35.31:545,35,0	1/1:0,3:3:6.02:110,6,0
chr10	10235791	.	ATG	A	7286.88	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=-4.546;DP=614;FS=0.540;HRun=0;HaplotypeScore=124.5406;InbreedingCoeff=0.9068;MQ=58.33;MQ0=6;MQRankSum=0.382;QD=16.60;ReadPosRankSum=3.011;VQSLOD=5.0888;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:31:12.87:108,13,0	1/1:2,4:8:17.67:167,18,0	0/0:41,0:21:20.58:0,21,262	0/0:34,0:23:25.44:0,25,379	0/0:19,0:18:38.70:0,39,291	0/0:16,0:22:12:0,12,105	0/0:10,0:16:9:0,9,78	1/1:14,12:27:15.34:364,15,0	0/0:11,0:23:3.27:0,3,135	1/1:4,11:17:38.61:392,39,0	1/1:5,12:20:44.63:462,45,0	1/1:7,0:21:28.10:136,28,0	1/1:3,0:15:28.25:137,28,0	1/1:3,0:15:25.10:120,25,0	1/1:6,32:39:96.12:1099,96,0	1/1:4,12:16:33.10:385,33,0	1/1:6,11:17:30.09:348,30,0	1/1:4,14:17:12.51:329,13,0	1/1:10,9:18:26.90:284,27,0	1/1:6,22:28:60.18:698,60,0	1/1:14,21:38:77.23:801,77,0	1/1:7,0:21:32.08:148,32,0	1/1:4,0:21:32.41:154,32,0	1/1:13,0:15:3.30:15,3,0	0/0:20,0:20:44.83:0,45,347	1/1:10,7:18:23.90:259,24,0	1/1:3,17:21:53.99:609,54,0	1/1:2,8:12:26.74:273,27,0
chr10	10235797	.	G	GTA	1503.52	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=-3.017;DP=615;FS=1.285;HRun=0;HaplotypeScore=145.5885;InbreedingCoeff=0.5745;MQ=54.98;MQ0=7;MQRankSum=0.187;QD=14.74;ReadPosRankSum=2.890;VQSLOD=3.9079;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:28:39.57:0,40,242	0/0:8,0:8:19.71:0,20,136	0/0:46,0:23:34.91:0,35,511	0/0:36,0:21:51.74:0,52,618	1/1:1,17:17:39.13:750,39,0	0/1:21,0:20:15.54:16,0,53	0/1:17,0:17:1.90:2,0,81	0/0:24,0:24:59.65:0,60,465	0/1:24,0:24:3.32:3,0,122	0/0:20,0:19:56.70:0,57,433	0/0:22,0:22:59.64:0,60,438	0/0:18,0:18:38.28:0,38,244	0/0:14,0:14:32.10:0,32,199	0/0:13,0:13:26.39:0,26,156	0/0:38,0:39:99:0,110,817	0/0:15,0:15:38.78:0,39,286	0/0:17,0:17:41.67:0,42,299	0/0:21,0:20:32.04:0,32,300	0/0:19,0:17:47.84:0,48,387	0/0:28,0:28:71.62:0,72,534	0/0:38,0:38:99:0,110,836	0/0:18,0:18:40.83:0,41,253	0/0:20,0:21:41.16:0,41,255	0/0:17,0:17:7.91:0,8,58	1/1:0,22:22:45.15:865,45,0	0/0:18,0:18:53.70:0,54,425	0/0:21,0:21:62.66:0,63,463	0/0:12,0:12:32.80:0,33,240
chr10	10237346	.	CT	C	5533.22	PASS	AB=0.900;AC=23;AF=0.411;AN=56;BaseQRankSum=4.736;DP=679;FS=2.650;HRun=11;HaplotypeScore=88.9487;InbreedingCoeff=0.8811;MQ=76.08;MQ0=1;MQRankSum=-0.690;QD=17.57;ReadPosRankSum=2.191;VQSLOD=5.7232;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,35:42:67.14:756,67,0	0/0:10,0:10:24.04:0,24,246	0/1:24,3:25:20:20,0,382	0/0:20,0:20:27.17:0,27,358	0/0:31,0:31:90.13:0,90,937	0/0:2,0:21:45.52:0,46,228	0/0:4,0:21:42.71:0,43,214	1/1:8,33:41:92.81:760,93,0	0/0:3,0:17:48.76:0,49,282	0/0:19,2:21:1.82:0,2,420	0/0:11,1:13:5.29:0,5,240	1/1:3,20:24:49.98:400,50,0	1/1:3,22:25:59.92:493,60,0	1/1:4,26:30:74.89:616,75,0	0/0:32,0:32:81.02:0,81,838	0/0:27,0:28:69.01:0,69,718	0/0:26,1:27:44.52:0,45,673	0/0:21,0:21:45.07:0,45,462	1/1:2,19:21:56.92:468,57,0	1/1:7,18:25:53.89:439,54,0	1/1:4,14:18:41.93:345,42,0	1/1:3,22:25:67.96:548,68,0	1/1:0,19:19:44.93:370,45,0	1/1:3,15:18:38.95:320,39,0	0/0:30,0:30:75.19:0,75,797	0/0:28,3:31:28.91:0,29,718	0/0:28,1:31:56.35:0,56,765	0/0:10,0:10:30.05:0,30,310
chr10	10237980	.	G	GTT	1793.11	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-6.508;DP=710;FS=3.827;HRun=6;HaplotypeScore=124.6473;InbreedingCoeff=0.9989;MQ=73.94;MQ0=2;MQRankSum=-2.557;QD=38.15;ReadPosRankSum=-0.644;VQSLOD=2.1877;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:84.26:0,84,1015	0/0:17,0:17:45.14:0,45,544	0/0:25,0:25:56.69:0,57,641	0/0:36,0:33:75.24:0,75,841	1/1:3,25:28:72.24:1196,72,0	0/0:33,0:32:90.28:0,90,1098	0/0:36,0:36:99:0,99,1194	0/0:26,0:26:66.19:0,66,804	0/0:19,0:19:48.14:0,48,585	0/0:19,0:19:57.14:0,57,678	0/0:27,0:27:72.22:0,72,878	0/0:28,0:28:78.22:0,78,939	0/0:25,0:25:69.21:0,69,841	0/0:25,0:25:72.23:0,72,878	0/0:28,0:28:75.23:0,75,913	0/0:24,0:24:72.23:0,72,878	0/0:23,0:23:63.17:0,63,756	0/0:19,0:19:54.16:0,54,651	0/0:23,0:23:48.13:0,48,585	0/0:30,0:30:81.23:0,81,975	0/0:30,0:30:75.23:0,75,915	0/0:26,0:26:75.23:0,75,915	0/0:19,0:19:48.13:0,48,573	0/0:24,0:24:60.16:0,60,719	1/1:1,17:18:45.11:718,45,0	0/0:32,0:32:93.29:0,93,1134	0/0:30,0:30:90.18:0,90,1050	0/0:8,0:8:24.08:0,24,293
chr10	10238123	.	AG	A	6781.16	PASS	AB=0.600;AC=19;AF=0.339;AN=56;BaseQRankSum=4.843;DP=792;FS=5.084;HRun=4;HaplotypeScore=154.3828;InbreedingCoeff=0.9224;MQ=67.43;MQ0=4;MQRankSum=0.072;QD=29.74;ReadPosRankSum=2.757;VQSLOD=3.0092;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:94.03:0,94,1149	1/1:2,9:11:27.55:325,28,0	0/0:30,0:20:50.75:0,51,580	0/0:55,0:36:47.41:0,47,737	0/0:23,0:23:66.22:0,66,921	0/0:42,0:42:99:0,120,1675	0/0:43,0:43:99:0,120,1614	0/0:17,0:16:37.02:0,37,478	0/0:29,0:29:71.64:0,72,926	1/1:1,43:43:99:1372,112,0	1/1:2,16:18:45.14:540,45,0	0/0:38,0:38:99:0,108,1508	0/0:25,0:25:69.23:0,69,964	0/0:26,0:26:72.18:0,72,962	1/1:1,20:21:60.18:719,60,0	1/1:3,25:28:33.34:822,33,0	1/1:4,27:31:40.52:866,41,0	1/1:3,18:21:32.69:492,33,0	0/0:10,0:10:24.07:0,24,335	0/0:28,0:28:81.27:0,81,1129	0/0:44,0:45:99:0,101,1339	0/0:25,0:25:75.24:0,75,1028	0/0:30,0:30:71.34:0,71,1023	0/0:39,0:39:99:0,105,1447	0/0:22,0:22:66.22:0,66,923	1/1:1,29:30:84.22:992,84,0	1/1:1,20:21:34.38:592,34,0	0/1:1,2:3:14.83:63,0,15
chr10	10238201	.	A	AGGT	7067.22	PASS	AB=0.844;AC=24;AF=0.429;AN=56;BaseQRankSum=9.812;DP=921;FS=88.445;HRun=0;HaplotypeScore=615.1940;InbreedingCoeff=-0.7521;MQ=51.09;MQ0=0;MQRankSum=-10.757;QD=8.81;ReadPosRankSum=3.519;VQSLOD=1.4509;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:28,6:34:99:192,0,1066	0/1:10,2:12:99:137,0,343	0/0:30,0:29:78.03:0,78,1249	0/0:30,0:26:56.98:0,57,965	0/1:20,10:30:99:221,0,651	0/1:23,11:34:99:585,0,899	0/1:43,2:45:99:109,0,1134	0/1:31,0:30:72.56:73,0,683	0/1:38,4:42:99:258,0,1178	0/1:35,15:50:99:815,0,1339	0/1:17,8:25:99:330,0,490	0/1:34,8:44:99:484,0,1164	0/1:32,4:37:99:213,0,941	0/1:23,8:31:99:463,0,518	0/1:33,8:41:99:385,0,1265	0/1:42,3:45:48.86:49,0,1605	0/0:26,1:28:13.97:0,14,959	0/1:13,4:17:99:296,0,311	0/1:22,2:24:87.32:87,0,832	0/1:25,3:29:61.74:62,0,702	0/0:28,2:30:57.23:0,57,1146	0/1:21,10:31:99:370,0,673	0/1:28,8:36:99:378,0,866	0/1:21,3:24:43.67:44,0,596	0/1:27,9:37:99:510,0,970	0/1:50,10:60:99:621,0,1744	0/1:26,7:33:99:289,0,884	0/1:8,2:10:96.42:96,0,324
chr10	10239685	.	C	CGAA	33700.46	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-0.665;DP=785;FS=1.051;HRun=0;HaplotypeScore=142.2613;InbreedingCoeff=0.9986;MQ=76.35;MQ0=0;MQRankSum=-5.881;QD=47.40;ReadPosRankSum=2.850;VQSLOD=6.9480;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,36:41:91.19:1616,91,0	1/1:2,11:13:33.07:682,33,0	0/0:16,0:16:28.25:0,28,478	0/0:23,0:23:36.01:0,36,555	0/0:13,0:13:36.12:0,36,578	1/1:5,15:20:42.10:880,42,0	1/1:7,29:37:87.60:1736,88,0	1/1:16,16:38:66.16:1195,66,0	1/1:5,25:31:72.20:1528,72,0	1/1:4,23:28:72.17:1333,72,0	1/1:3,10:13:29.91:519,30,0	1/1:7,28:35:87.09:1689,87,0	1/1:5,32:37:90.22:1891,90,0	1/1:3,31:34:90.27:1934,90,0	1/1:4,36:41:99:2178,105,0	1/1:4,33:38:93.16:1868,93,0	1/1:3,29:32:81.28:1786,81,0	1/1:9,25:35:75.09:1509,75,0	1/1:6,12:19:45.04:807,45,0	1/1:4,18:23:58.28:1068,58,0	1/1:7,46:53:99:2360,113,0	1/1:3,11:14:32.90:537,33,0	1/1:3,11:16:28.16:460,28,0	1/1:3,50:53:99:2847,129,0	0/0:22,0:22:63.18:0,63,951	1/1:6,18:24:63.13:1253,63,0	1/1:2,23:26:72.16:1496,72,0	1/1:2,8:10:24.08:529,24,0
chr10	10240727	.	C	CCTG	4146.65	PASS	AB=0.811;AC=27;AF=0.482;AN=56;BaseQRankSum=-7.596;DP=733;FS=2.169;HRun=0;HaplotypeScore=230.9732;InbreedingCoeff=-0.1944;MQ=51.11;MQ0=19;MQRankSum=6.477;QD=6.97;ReadPosRankSum=6.864;VQSLOD=2.6076;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:7,28:33:15.64:162,0,16	0/1:22,0:22:82.43:158,0,82	0/0:18,0:11:19.75:0,20,158	0/0:10,0:7:11.92:0,12,118	0/0:35,0:36:26.18:0,26,219	0/0:25,0:24:24.47:0,24,353	0/0:24,0:23:29.77:0,30,226	0/1:48,0:44:99:415,0,182	0/1:32,0:30:10:10,0,204	0/1:37,0:36:99:296,0,99	0/1:39,0:37:50.50:225,0,50	0/1:4,24:28:21.38:148,0,21	0/1:22,0:21:18.83:212,0,19	0/1:15,10:22:86.25:86,0,99	1/1:24,0:23:13.73:220,14,0	0/1:26,0:26:13.39:117,0,13	1/1:8,0:8:6.85:62,7,0	1/1:13,0:12:24.92:187,25,0	0/1:6,12:18:10.08:261,0,10	0/1:9,17:26:26.55:282,0,27	1/1:17,0:17:34.76:280,35,0	0/1:14,18:31:5.79:278,0,6	0/1:14,19:33:59.48:162,0,59	0/1:2,22:24:9.54:10,0,19	0/0:25,0:23:34.54:0,35,228	0/1:37,0:35:99:140,0,139	0/1:28,0:28:60.36:161,0,60	1/1:19,0:19:35.22:274,35,0
chr10	10240743	.	C	CTCT	5108.60	PASS	AB=0.976;AC=33;AF=0.611;AN=54;BaseQRankSum=-2.925;DP=682;FS=24.835;HRun=0;HaplotypeScore=209.7670;InbreedingCoeff=-0.3512;MQ=36.24;MQ0=25;MQRankSum=3.244;QD=7.94;ReadPosRankSum=1.668;VQSLOD=2.7979;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:31:15.53:221,0,16	0/1:23,0:23:18.43:288,0,18	./.	0/0:9,0:3:2.80:0,3,13	0/1:32,0:33:33.38:33,0,101	0/1:23,2:25:99:240,0,100	0/0:3,18:19:5.87:0,6,35	0/1:40,0:36:99:275,0,168	0/1:13,13:24:59.67:121,0,60	1/1:40,0:39:36.46:481,36,0	1/1:33,0:31:47.29:409,47,0	0/1:26,0:26:30.75:169,0,31	0/1:22,0:21:30.89:143,0,31	0/1:28,0:24:67.69:156,0,68	1/1:22,0:21:6.93:200,7,0	1/1:27,0:27:20.64:262,21,0	0/1:10,0:9:6.47:30,0,6	1/1:12,0:11:22.96:158,23,0	0/1:20,0:17:9.90:221,0,10	0/1:24,0:24:21.43:281,0,21	1/1:14,0:12:20.84:159,21,0	0/1:34,0:33:98.98:296,0,99	0/1:32,0:32:99:154,0,147	0/1:23,0:23:6.22:6,0,36	0/1:19,0:17:16.63:125,0,17	1/1:36,0:34:8.81:312,9,0	0/1:31,0:30:6.43:253,0,6	1/1:10,0:10:14.89:115,15,0
chr10	10240755	.	C	CTCT	1744.91	PASS	AB=0.985;AC=27;AF=0.500;AN=54;BaseQRankSum=2.633;DP=606;FS=11.315;HRun=0;HaplotypeScore=208.2991;InbreedingCoeff=-0.6089;MQ=33.76;MQ0=21;MQRankSum=-3.193;QD=3.12;ReadPosRankSum=4.646;VQSLOD=1.3338;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:25:17.98:94,0,18	0/1:22,0:22:56.37:56,0,176	./.	0/1:7,0:1:0:0,0,0	0/1:27,5:32:19.67:151,0,20	0/1:23,0:23:36.92:37,0,157	0/0:19,0:17:0.24:0,0,16	0/1:38,0:35:74.39:74,0,222	0/1:19,0:17:28.96:29,0,75	0/1:38,0:37:25.62:26,0,432	0/1:27,0:28:99:168,0,204	1/1:23,0:23:0.02:48,0,0	0/1:22,0:21:48.66:49,0,103	1/1:23,0:20:1.71:131,2,0	0/1:22,0:21:29.27:29,0,203	0/1:24,0:24:46.75:47,0,421	0/0:8,0:7:8.54:0,9,73	0/0:12,0:11:2.48:0,2,179	0/1:16,0:14:53.93:54,0,80	0/1:20,0:20:42.37:42,0,85	0/1:12,0:10:18.20:18,0,58	0/1:30,0:29:2.66:206,0,3	0/1:29,0:29:2.22:157,0,2	1/1:18,0:18:1.77:81,2,0	0/1:16,3:17:16.92:196,0,17	0/1:34,0:32:85.05:85,0,385	0/1:27,0:26:91.31:91,0,167	0/1:6,0:6:11.56:12,0,15
chr10	10241152	.	ATGTTGTTGTTGTTGTTGT	A	1971.99	PASS	AC=12;AF=0.222;AN=54;BaseQRankSum=-0.605;DP=378;FS=1.570;HRun=0;HaplotypeScore=173.3165;InbreedingCoeff=0.8233;MQ=75.28;MQ0=4;MQRankSum=-3.151;QD=32.33;ReadPosRankSum=0.981;VQSLOD=2.9597;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:48.16:0,48,1686	0/0:3,0:3:6.02:0,6,127	0/0:27,0:23:30.10:0,30,1104	0/0:26,0:19:33.09:0,33,811	0/0:7,0:10:12:0,12,118	1/1:8,0:8:15.05:331,15,0	1/1:16,0:16:31.32:625,31,0	1/1:6,5:11:15.03:280,15,0	1/1:12,0:12:20.28:550,20,0	0/0:19,0:19:42.57:0,43,858	0/0:8,0:8:15.01:0,15,243	0/0:7,0:6:3.01:0,3,216	0/0:13,0:13:30.08:0,30,1006	0/0:10,0:10:21.07:0,21,709	0/0:21,0:21:17.98:0,18,231	0/0:13,0:13:6.49:0,6,82	0/0:25,0:25:57.12:0,57,1155	0/0:27,0:27:17.73:0,18,350	1/1:5,3:8:9.02:317,9,0	./.	1/1:6,0:6:3.01:40,3,0	0/0:11,0:11:27.09:0,27,998	0/0:7,0:7:21.03:0,21,532	0/0:18,0:18:36.12:0,36,1469	0/0:3,0:3:5.97:0,6,45	0/0:22,0:22:51.09:0,51,841	0/0:22,0:22:15.49:0,15,272	0/0:3,0:3:9.03:0,9,167
chr10	10241179	.	TTGTTGTTGGTGG	T	3009.87	PASS	AB=1.000;AC=27;AF=0.500;AN=54;BaseQRankSum=1.162;DP=275;FS=22.972;HRun=0;HaplotypeScore=99.7801;InbreedingCoeff=0.4043;MQ=49.47;MQ0=10;MQRankSum=-1.518;QD=15.84;ReadPosRankSum=3.288;VQSLOD=0.2562;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:17,0:16:23.07:23,0,366	1/1:1,0:1:3.01:34,3,0	0/0:9,0:6:12.03:0,12,156	0/0:10,0:5:11.35:0,11,103	0/0:4,0:4:0.47:0,0,1	0/1:4,0:4:43.62:51,0,44	0/1:15,0:14:96.35:96,0,246	1/1:10,0:9:2.96:19,3,0	0/1:10,0:10:99:151,0,110	1/1:4,11:13:17.64:333,18,0	1/1:3,0:3:3.01:34,3,0	0/0:4,0:3:9.03:0,9,237	0/0:8,0:8:8.89:0,9,180	0/0:10,0:10:24.16:0,24,418	1/1:0,17:17:8.66:339,9,0	1/1:0,8:8:2.86:105,3,0	0/1:20,0:20:2.60:668,0,3	1/1:4,19:22:6.02:72,6,0	1/1:6,0:6:9:98,9,0	./.	0/0:8,0:5:0.82:0,1,2	0/0:9,0:9:19.53:0,20,371	0/0:6,0:6:16.17:0,16,138	0/0:15,0:15:17.28:0,17,378	0/0:2,0:2:3.48:0,3,51	1/1:1,17:18:42.07:826,42,0	1/1:3,17:20:10.69:263,11,0	1/1:3,0:3:8.05:72,8,0
chr10	10241515	.	G	GTA	2115.22	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=1.577;DP=543;FS=10.461;HRun=0;HaplotypeScore=140.5547;InbreedingCoeff=0.7687;MQ=61.32;MQ0=10;MQRankSum=-3.630;QD=12.09;ReadPosRankSum=-1.285;VQSLOD=2.7997;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:42.22:0,42,356	0/0:5,0:5:3.32:0,3,44	0/0:43,0:17:38.05:0,38,377	0/0:34,0:18:38.01:0,38,352	0/0:7,0:7:11.82:0,12,93	1/1:15,3:18:14.96:253,15,0	1/1:20,4:24:39.23:339,39,0	1/1:17,0:17:47.41:363,47,0	1/1:22,7:29:45.05:621,45,0	0/0:12,0:12:25.82:0,26,202	0/0:8,0:8:2.79:0,3,44	0/0:17,0:17:26.56:0,27,273	0/0:13,0:13:16.48:0,16,223	0/0:13,0:12:25.71:0,26,175	0/0:19,0:19:6.29:0,6,155	0/1:28,0:28:2.03:2,0,239	0/0:33,0:33:12.72:0,13,270	0/0:26,0:26:38.97:0,39,287	1/1:11,3:14:38.93:382,39,0	1/1:3,0:2:5.99:50,6,0	1/1:42,0:42:35.86:292,36,0	0/0:14,0:14:19.53:0,20,122	0/0:8,0:8:8.65:0,9,67	0/0:30,0:29:17.83:0,18,137	0/0:10,0:10:23.95:0,24,193	0/0:16,0:15:7.22:0,7,189	0/0:24,0:24:6.84:0,7,186	0/0:8,0:8:2.92:0,3,93
chr10	10241551	.	A	ATAGC	7339.74	PASS	AB=0.798;AC=32;AF=0.593;AN=54;BaseQRankSum=1.034;DP=745;FS=15.162;HRun=0;HaplotypeScore=180.1698;InbreedingCoeff=-0.1550;MQ=46.59;MQ0=23;MQRankSum=-4.802;QD=13.18;ReadPosRankSum=3.940;VQSLOD=3.2791;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:22,14:38:70.70:71,0,192	1/1:1,0:7:2.75:62,3,0	0/0:44,0:14:29.50:0,30,690	0/0:42,0:18:51.14:0,51,928	0/1:9,0:9:94.91:95,0,101	0/1:12,10:25:99:198,0,361	0/1:14,26:41:99:113,0,201	0/1:33,0:33:99:833,0,382	0/1:18,14:35:99:246,0,361	1/1:3,1:30:23.74:896,24,0	1/1:2,0:10:3.01:77,3,0	0/1:10,16:28:8.58:9,0,108	0/1:7,17:24:99:371,0,231	0/1:15,10:26:99:156,0,262	1/1:1,2:30:21.02:409,21,0	1/1:5,3:30:37.98:597,38,0	1/1:8,1:38:23.81:449,24,0	1/1:7,2:33:10.65:441,11,0	0/1:16,0:18:99:591,0,169	./.	0/0:29,23:55:0.49:0,0,266	0/1:16,7:23:42.31:42,0,134	0/1:15,0:15:43.43:205,0,43	0/0:19,20:42:4.81:0,5,107	0/1:11,0:11:17.50:18,0,56	1/1:7,0:20:41.58:657,42,0	1/1:2,0:25:36.59:715,37,0	0/1:5,0:5:3.07:88,0,3
chr10	10242256	.	T	TACAC	4616.65	PASS	AB=0.683;AC=43;AF=0.860;AN=50;BaseQRankSum=-2.289;DP=637;FS=2.209;HRun=0;HaplotypeScore=130.7709;InbreedingCoeff=0.3795;MQ=68.84;MQ0=7;MQRankSum=0.613;QD=8.58;ReadPosRankSum=-1.171;VQSLOD=3.8484;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:31,12:46:11.73:225,12,0	1/1:14,0:13:5.86:94,6,0	./.	./.	0/0:2,0:9:3.47:0,3,29	1/1:6,9:16:11.78:225,12,0	1/1:20,12:36:17.26:306,17,0	1/1:24,0:23:24.02:280,24,0	0/1:15,10:28:5.33:143,0,5	1/1:15,0:15:27:320,27,0	0/0:7,0:11:0.47:0,0,1	1/1:13,0:27:6.02:104,6,0	1/1:9,1:19:15.05:261,15,0	1/1:8,2:21:8.85:159,9,0	1/1:17,1:27:5.60:64,6,0	1/1:12,0:22:8.98:156,9,0	1/1:16,1:27:18.16:239,18,0	1/1:23,0:33:18.99:275,19,0	1/1:17,0:17:24.42:260,24,0	1/1:8,0:8:3.01:52,3,0	1/1:37,0:34:5.99:69,6,0	1/1:9,7:20:5.83:142,6,0	1/1:12,0:17:8.23:37,8,0	1/1:17,15:40:32.05:546,32,0	0/0:6,0:11:3:0,3,28	1/1:26,0:26:42.80:555,43,0	1/1:8,0:17:6.02:104,6,0	./.
chr10	10242294	.	CTCATGCATGCAT	C	183.72	PASS	AB=0.935;AC=4;AF=0.071;AN=56;BaseQRankSum=0.017;DP=587;FS=28.545;HRun=0;HaplotypeScore=177.4814;InbreedingCoeff=-0.0856;MQ=65.09;MQ0=12;MQRankSum=-4.216;QD=2.27;ReadPosRankSum=-5.296;VQSLOD=-0.4719;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:51.61:0,52,2437	0/0:10,0:9:11.84:0,12,621	0/0:26,0:17:47.67:0,48,1982	0/0:27,0:17:51.18:0,51,2162	0/0:16,0:16:18.05:0,18,826	0/0:15,0:14:36.10:0,36,1662	0/0:31,0:31:60.68:0,61,3064	0/0:33,0:32:1.81:0,2,3378	0/0:26,0:26:38.87:0,39,1959	0/1:19,0:19:99:107,0,1576	0/0:7,0:7:12.02:0,12,590	0/0:28,0:28:47.28:0,47,2352	0/0:18,0:18:35.91:0,36,1773	0/1:12,0:12:0.87:1,0,1083	0/0:19,0:19:39.61:0,40,2037	0/0:16,0:16:45.15:0,45,2325	0/0:25,0:25:52.33:0,52,2459	0/0:26,0:26:61.16:0,61,2718	0/1:16,0:14:22.82:23,0,1496	0/0:8,0:7:8.77:0,9,444	0/0:43,0:40:50.36:0,50,2641	0/0:16,0:16:17.89:0,18,910	0/0:15,0:14:30.10:0,30,1479	0/0:36,0:36:67.11:0,67,3390	0/0:17,0:17:36.12:0,36,1681	0/1:22,12:34:99:152,0,2768	0/0:13,0:13:36.12:0,36,1855	0/0:3,0:2:6.02:0,6,356
chr10	10242595	.	CTGTGTG	C	316.96	PASS	AB=1.000;AC=18;AF=0.429;AN=42;BaseQRankSum=4.306;DP=574;FS=8.766;HRun=0;HaplotypeScore=108.1086;InbreedingCoeff=0.4203;MQ=72.23;MQ0=19;MQRankSum=-1.418;QD=1.50;ReadPosRankSum=-0.431;VQSLOD=1.5312;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:23:3.01:48,3,0	0/0:9,0:9:9.03:0,9,175	./.	./.	./.	1/1:17,0:17:3.01:58,3,0	1/1:22,7:28:3.99:44,4,0	./.	1/1:15,3:18:2.74:38,3,0	0/0:12,0:12:3.48:0,3,70	0/0:11,0:11:6.02:0,6,108	1/1:17,0:17:5.91:69,6,0	1/1:14,0:14:3.01:44,3,0	1/1:18,0:18:6.02:85,6,0	0/0:9,0:9:6.02:0,6,84	0/0:18,0:18:12.03:0,12,157	0/1:32,0:30:22.14:22,0,286	0/0:26,0:23:25.33:0,25,332	0/0:23,0:23:0:0,0,0	./.	0/0:46,0:45:2.77:0,3,23	./.	./.	1/1:25,0:23:2.63:43,3,0	0/0:15,0:16:12.04:0,12,153	0/0:13,0:12:6.02:0,6,82	0/1:17,0:17:0.57:1,0,348	0/0:4,0:4:6.02:0,6,106
chr10	10242637	.	GTGTGTGTGTGA	G	1257.16	PASS	AB=0.992;AC=18;AF=0.333;AN=54;BaseQRankSum=6.337;DP=520;FS=1.630;HRun=0;HaplotypeScore=117.6040;InbreedingCoeff=0.4564;MQ=58.88;MQ0=16;MQRankSum=-0.475;QD=6.76;ReadPosRankSum=0.366;VQSLOD=1.9002;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,20:22:3.01:104,3,0	0/0:5,0:4:9.03:0,9,239	0/0:29,0:8:20.28:0,20,312	0/0:44,0:23:63.64:0,64,949	0/0:7,0:7:9.03:0,9,206	0/0:20,0:20:23.23:0,23,573	0/0:31,0:30:48.27:0,48,829	0/0:23,0:20:10.22:0,10,713	0/0:19,0:19:25.64:0,26,387	0/1:8,0:8:99:104,0,206	0/0:11,0:11:15.05:0,15,339	1/1:18,0:18:33.57:515,34,0	1/1:6,9:15:2.63:104,3,0	1/1:2,21:23:5.95:190,6,0	0/1:8,0:8:32.40:32,0,117	0/0:14,0:14:12.50:0,12,215	0/1:29,1:30:82.27:82,0,416	0/0:22,0:22:31.34:0,31,602	0/0:11,0:11:24.08:0,24,538	./.	0/0:51,0:50:84.05:0,84,1648	1/1:7,0:7:6.01:83,6,0	1/1:8,0:7:3.48:42,3,0	1/1:7,31:38:3.01:105,3,0	0/0:13,0:13:30.10:0,30,677	0/1:8,0:7:65.06:65,0,154	0/0:23,0:23:29.48:0,29,530	0/0:7,0:7:7.58:0,8,152
chr10	10242645	.	GTGA	G	1962.34	PASS	AC=32;AF=0.615;AN=52;BaseQRankSum=9.009;DP=469;FS=8.258;HRun=0;HaplotypeScore=63.9391;InbreedingCoeff=0.7749;MQ=62.43;MQ0=12;MQRankSum=-1.568;QD=8.46;ReadPosRankSum=1.459;VQSLOD=1.4810;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:20:3.01:30,3,0	./.	0/0:33,0:12:35.32:0,35,513	0/0:45,0:24:65.87:0,66,995	0/0:8,0:8:12.04:0,12,191	0/0:15,0:15:36.05:0,36,534	0/0:29,0:29:58.77:0,59,950	0/0:24,0:21:12.54:0,13,771	0/0:13,0:13:26.59:0,27,396	1/1:11,0:11:25.02:333,25,0	1/1:8,0:8:9.03:124,9,0	1/1:14,0:14:33.02:431,33,0	1/1:11,0:11:2.90:30,3,0	1/1:22,0:22:5.89:60,6,0	1/1:8,0:8:6.02:83,6,0	1/1:4,10:14:3.80:54,4,0	1/1:7,21:28:6.02:82,6,0	1/1:8,15:23:21.53:293,22,0	0/0:14,0:14:33.08:0,33,500	./.	0/0:40,0:40:99:0,102,1581	1/1:5,0:5:12.04:166,12,0	1/1:5,0:4:6.02:83,6,0	1/1:32,0:32:3.01:31,3,0	0/0:10,0:10:26.98:0,27,399	1/1:6,0:5:10.51:163,11,0	1/1:6,12:18:11.90:154,12,0	1/1:7,0:7:3.01:41,3,0
chr10	10242647	.	GA	G	1507.22	PASS	AB=0.600;AC=31;AF=0.596;AN=52;BaseQRankSum=8.948;DP=458;FS=6.942;HRun=1;HaplotypeScore=55.6650;InbreedingCoeff=0.7138;MQ=64.47;MQ0=12;MQRankSum=-1.258;QD=6.95;ReadPosRankSum=1.816;VQSLOD=0.6129;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:20:2.94:18,3,0	./.	0/0:35,0:14:38.48:0,38,543	0/0:46,0:25:64.68:0,65,998	0/0:8,0:8:12.04:0,12,191	0/0:16,0:16:39.13:0,39,592	0/0:31,0:31:63.20:0,63,976	0/0:24,1:22:19.45:0,19,828	0/0:14,0:14:29.91:0,30,461	1/1:1,10:11:25.02:334,25,0	1/1:3,5:8:9.03:124,9,0	1/1:1,15:16:20.17:401,20,0	1/1:11,0:11:2.91:17,3,0	1/1:22,0:22:5.48:32,5,0	1/1:0,8:8:6.02:83,6,0	1/1:10,0:10:2.95:20,3,0	1/1:22,1:23:5.89:36,6,0	1/1:19,1:20:17.04:120,17,0	0/0:14,0:14:35.15:0,35,521	./.	0/0:37,1:38:99:0,102,1597	1/1:0,5:5:12.04:165,12,0	1/1:0,5:4:6.02:83,6,0	1/1:32,0:32:2.76:16,3,0	0/0:10,0:10:27.09:0,27,413	0/1:2,4:5:7.31:151,0,7	1/1:15,0:15:11.26:58,11,0	1/1:0,5:5:3.01:41,3,0
chr10	10242855	.	A	AT	4521.82	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-8.896;DP=666;FS=0.807;HRun=2;HaplotypeScore=69.1897;InbreedingCoeff=0.9998;MQ=80.56;MQ0=0;MQRankSum=-0.458;QD=40.74;ReadPosRankSum=-2.059;VQSLOD=4.4046;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,141,1707	0/0:12,0:12:33.10:0,33,409	0/0:25,0:24:57.10:0,57,638	0/0:24,0:23:48.34:0,48,632	0/0:12,0:12:33.10:0,33,409	0/0:22,0:22:66.21:0,66,817	0/0:30,0:30:87.27:0,87,1079	1/1:1,32:33:96.28:1326,96,0	0/0:23,0:23:69.20:0,69,840	0/0:19,0:19:48.15:0,48,595	0/0:17,0:17:48.15:0,48,594	0/0:31,0:31:93.29:0,93,1153	0/0:22,0:22:63.20:0,63,781	0/0:26,0:26:75.22:0,75,917	0/0:28,0:28:81.25:0,81,1003	0/0:28,0:28:75.24:0,75,930	0/0:20,0:20:60.15:0,60,716	0/0:16,0:16:42.13:0,42,521	1/1:2,17:19:51.17:735,51,0	1/1:0,28:28:78.26:1121,78,0	1/1:0,31:31:93.31:1339,93,0	0/0:26,0:26:78.22:0,78,938	0/0:14,0:14:36.10:0,36,433	0/0:37,0:37:99:0,100,1328	0/0:17,0:17:51.16:0,51,631	0/0:23,0:23:63.20:0,63,781	0/0:17,0:17:48.15:0,48,595	0/0:17,0:17:36.11:0,36,444
chr10	10243187	.	CG	C	3858.42	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-5.639;DP=609;FS=4.793;HRun=8;HaplotypeScore=127.0137;InbreedingCoeff=0.8270;MQ=88.55;MQ0=3;MQRankSum=0.258;QD=22.70;ReadPosRankSum=7.328;VQSLOD=2.0781;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:30:11.64:0,12,68	0/0:6,0:7:5.87:0,6,40	0/0:35,0:35:78.05:0,78,852	0/0:20,0:20:51.01:0,51,561	0/0:11,0:11:8.94:0,9,65	1/1:2,20:22:54.08:521,54,0	1/1:3,26:29:75.12:724,75,0	1/1:6,11:16:27:254,27,0	1/1:2,21:23:54.09:521,54,0	0/0:15,0:15:5.74:0,6,30	0/0:14,0:14:5.78:0,6,32	0/0:12,0:23:31.72:0,32,177	0/0:5,0:16:14.24:0,14,82	0/0:24,0:24:14.99:0,15,94	0/0:13,0:23:5.23:0,5,24	0/0:13,0:21:26.55:0,27,129	0/0:16,0:34:21.47:0,21,103	0/0:15,0:23:11.02:0,11,50	1/1:5,20:24:60.05:565,60,0	1/1:3,24:26:63.10:607,63,0	1/1:1,26:27:69.11:665,69,0	0/0:13,0:24:3.52:0,4,17	0/0:12,0:27:21.11:0,21,138	0/0:12,0:32:25.67:0,26,131	0/0:15,0:15:16.36:0,16,85	0/0:17,0:17:14.67:0,15,96	0/0:16,0:23:7.50:0,8,44	0/0:4,0:4:4.15:0,4,19
chr10	10244112	.	CA	C	2918.71	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=12.476;DP=524;FS=25.074;HRun=8;HaplotypeScore=54.7609;InbreedingCoeff=0.9731;MQ=60.40;MQ0=1;MQRankSum=-1.107;QD=19.86;ReadPosRankSum=-1.038;VQSLOD=1.8975;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,102,1219	0/0:4,0:4:6.02:0,6,72	0/0:11,0:8:16.29:0,16,180	0/0:14,0:12:21.06:0,21,246	1/1:28,0:28:26.87:289,27,0	0/0:19,0:19:54.17:0,54,651	0/0:17,0:17:51.16:0,51,614	1/1:3,28:31:84.12:806,84,0	0/0:15,0:15:45.14:0,45,543	0/0:26,0:26:72.21:0,72,850	0/0:16,0:16:39.12:0,39,471	0/0:14,0:14:33.09:0,33,383	0/0:16,0:16:42.11:0,42,494	0/0:11,0:11:21.06:0,21,253	0/0:19,1:20:19.17:0,19,515	0/0:13,0:13:30.09:0,30,361	0/0:24,0:24:60.17:0,60,711	0/0:14,0:14:33.57:0,34,399	1/1:2,20:22:60.05:566,60,0	1/1:2,31:33:93.14:895,93,0	1/1:1,13:14:33.05:319,33,0	0/0:14,0:14:30.08:0,30,350	0/0:12,0:12:30.08:0,30,350	0/0:16,0:16:45.08:0,45,511	1/1:19,0:19:45.63:232,46,0	0/0:23,0:22:57.17:0,57,686	0/0:27,0:27:72.20:0,72,855	0/0:14,0:14:42.09:0,42,491
chr10	10244120	.	AT	A	1688.98	PASS	AB=1.000;AC=8;AF=0.143;AN=56;BaseQRankSum=14.313;DP=522;FS=9.066;HRun=1;HaplotypeScore=57.9558;InbreedingCoeff=0.4122;MQ=60.72;MQ0=1;MQRankSum=-1.099;QD=11.04;ReadPosRankSum=1.982;VQSLOD=1.1572;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,99,1358	0/0:5,0:5:11.99:0,12,130	0/0:12,0:8:24.04:0,24,275	0/0:10,0:9:24.08:0,24,318	1/1:1,26:27:71.82:929,72,0	0/0:20,0:20:60.16:0,60,773	0/0:20,0:20:60.14:0,60,750	0/1:32,0:32:39.31:39,0,67	0/0:16,0:16:48.14:0,48,641	0/0:26,0:26:78.24:0,78,1019	0/0:16,0:16:45.12:0,45,594	0/0:12,0:12:35.95:0,36,426	0/0:14,0:14:42.13:0,42,569	0/0:7,0:7:21.07:0,21,283	0/0:17,0:17:42.72:0,43,624	0/0:11,0:11:33.09:0,33,415	0/0:23,0:23:69.09:0,69,879	0/0:15,0:15:20.49:0,20,462	0/1:23,0:23:16.08:16,0,53	0/1:38,0:38:71.50:164,0,71	0/1:16,0:16:20.82:21,0,44	0/0:13,0:13:36.07:0,36,441	0/0:13,0:13:39.07:0,39,473	0/0:16,0:16:48.06:0,48,580	1/1:0,17:17:48.16:668,48,0	0/0:29,0:28:81.18:0,81,978	0/0:25,0:25:75.17:0,75,971	0/0:15,0:15:45.14:0,45,604
chr10	10244246	.	G	GA	18746.72	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-6.452;DP=576;FS=7.220;HRun=5;HaplotypeScore=58.3912;InbreedingCoeff=0.9954;MQ=82.82;MQ0=0;MQRankSum=-9.054;QD=35.04;ReadPosRankSum=5.674;VQSLOD=4.5348;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,29:30:87.28:1138,87,0	1/1:1,11:12:33.11:434,33,0	0/0:20,0:20:42.54:0,43,475	0/0:21,0:21:18.94:0,19,424	1/1:2,24:26:69.18:888,69,0	1/1:1,16:17:48.16:632,48,0	1/1:2,10:12:30.05:375,30,0	1/1:5,26:31:78.23:995,78,0	1/1:2,11:13:30.10:395,30,0	1/1:1,22:23:66.21:868,66,0	1/1:1,20:21:51.17:671,51,0	1/1:2,18:20:51.17:671,51,0	1/1:1,16:17:48.16:632,48,0	1/1:0,14:14:39.13:513,39,0	1/1:2,14:16:42.14:553,42,0	1/1:2,11:13:30.10:395,30,0	1/1:1,28:29:81.26:1065,81,0	1/1:0,21:21:63.20:829,63,0	1/1:0,31:31:90.29:1182,90,0	1/1:5,24:29:57.19:750,57,0	1/1:1,20:21:60.20:790,60,0	1/1:0,15:15:36.12:473,36,0	1/1:0,18:18:48.16:632,48,0	1/1:0,15:15:45.15:592,45,0	1/1:3,16:19:45.15:592,45,0	1/1:2,37:39:99:1459,111,0	1/1:2,20:22:60.20:789,60,0	1/1:0,11:11:33.11:434,33,0
chr10	10244466	.	A	AAC	18329.32	PASS	AB=0.833;AC=41;AF=0.732;AN=56;BaseQRankSum=-11.691;DP=864;FS=0.324;HRun=0;HaplotypeScore=102.4290;InbreedingCoeff=0.9032;MQ=54.29;MQ0=29;MQRankSum=2.503;QD=31.77;ReadPosRankSum=3.685;VQSLOD=6.7582;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,35:42:87.30:1468,87,0	1/1:0,10:10:18.06:306,18,0	0/0:71,0:20:45.02:0,45,533	0/0:46,0:17:36.21:0,36,425	0/0:33,0:33:99:0,99,1272	0/0:33,0:33:76.08:0,76,1104	0/0:35,0:35:71.52:0,72,955	1/1:16,5:16:30.56:456,31,0	0/0:40,0:40:99:0,99,1247	1/1:7,28:34:89.58:1391,90,0	1/1:0,17:17:42.14:700,42,0	1/1:6,32:37:75.26:1275,75,0	1/1:5,24:29:51.17:865,51,0	1/1:0,26:26:54.18:918,54,0	1/1:3,30:33:66.22:1107,66,0	1/1:2,26:28:57.20:969,57,0	1/1:14,13:27:39.84:792,40,0	1/1:8,17:24:33.11:559,33,0	0/1:8,2:8:30.12:91,0,30	1/1:18,3:21:56.22:635,56,0	1/1:9,24:33:13.16:271,13,0	1/1:2,23:25:51.05:818,51,0	1/1:1,23:24:54.18:918,54,0	1/1:8,48:55:78.63:1640,79,0	0/0:29,0:29:78.23:0,78,989	1/1:3,32:35:93.29:1541,93,0	1/1:1,20:21:54.18:917,54,0	1/1:3,16:19:23.87:693,24,0
chr10	10244474	.	CATACACACAA	C	1123.78	PASS	AB=0.995;AC=13;AF=0.232;AN=56;BaseQRankSum=3.667;DP=853;FS=0.000;HRun=0;HaplotypeScore=261.3180;InbreedingCoeff=0.2635;MQ=54.16;MQ0=30;MQRankSum=-4.890;QD=4.32;ReadPosRankSum=-7.139;VQSLOD=0.4177;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:39,0:39:15.04:15,0,2351	0/0:11,0:11:18.06:0,18,786	0/0:73,0:20:47.95:0,48,1064	0/0:45,0:15:21.85:0,22,626	0/0:33,0:33:99:0,99,4212	0/0:34,0:34:55.89:0,56,3468	0/0:38,0:40:75.41:0,75,3291	1/1:23,0:17:32.04:248,32,0	0/0:37,0:37:99:0,111,3941	0/1:32,0:31:48.19:48,0,2213	0/0:18,0:18:10.20:0,10,875	0/0:39,0:38:73.19:0,73,2710	0/0:27,0:26:21.24:0,21,1423	0/0:28,0:28:25.73:0,26,1542	0/0:34,0:34:20.72:0,21,1924	0/0:28,0:28:5.19:0,5,1531	0/1:24,0:25:37.98:38,0,1134	0/0:23,0:22:12.01:0,12,1251	0/1:8,0:5:6.98:75,0,7	1/1:11,10:22:62.09:661,62,0	1/1:30,0:29:1.91:152,2,0	0/1:25,0:25:3.55:4,0,1285	0/0:23,0:23:14.59:0,15,1426	0/0:55,0:54:65.63:0,66,3389	0/0:28,0:28:81.26:0,81,2953	0/1:33,0:33:31.30:31,0,2054	0/1:23,0:23:12.38:12,0,1016	0/0:17,0:17:45.07:0,45,1804
chr10	10244496	.	AACACAC	A	939.44	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=7.853;DP=813;FS=0.000;HRun=0;HaplotypeScore=219.5392;InbreedingCoeff=0.3409;MQ=52.76;MQ0=33;MQRankSum=-7.468;QD=9.89;ReadPosRankSum=-4.781;VQSLOD=1.6786;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:90.31:0,90,2857	0/0:9,0:9:24.08:0,24,784	0/0:49,0:15:42.10:0,42,983	0/0:31,0:12:36.10:0,36,785	0/0:31,0:31:84.29:0,84,2834	0/0:28,0:28:70.54:0,71,2437	0/0:39,0:39:66.41:0,66,3213	0/1:27,0:19:99:189,0,220	0/0:33,0:33:90.31:0,90,2918	0/0:33,0:33:93.32:0,93,2983	0/0:21,0:21:60.19:0,60,1775	0/0:42,0:42:99:0,105,3271	0/0:25,0:24:60.21:0,60,1831	0/0:26,0:26:72.25:0,72,2328	0/0:34,0:34:93.32:0,93,2800	0/0:29,0:29:72.25:0,72,2245	0/0:28,0:28:66.10:0,66,1766	0/0:18,0:17:36.12:0,36,1210	0/1:22,0:18:99:270,0,108	1/1:8,10:18:46.89:508,47,0	0/1:28,0:26:32.69:97,0,33	0/0:23,0:23:63.20:0,63,1946	0/0:25,0:25:60.19:0,60,1839	0/0:61,0:59:99:0,129,4633	0/0:20,0:20:57.20:0,57,1955	0/0:35,0:35:99:0,105,3200	0/0:24,0:24:69.24:0,69,1882	0/0:15,0:15:42.14:0,42,1495
chr10	10244502	.	C	CAA	2003.25	PASS	AB=0.807;AC=5;AF=0.089;AN=56;BaseQRankSum=4.152;DP=803;FS=2.457;HRun=1;HaplotypeScore=158.4193;InbreedingCoeff=0.4196;MQ=53.19;MQ0=28;MQRankSum=-4.317;QD=18.90;ReadPosRankSum=-4.232;VQSLOD=-0.2501;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:93.28:0,93,1367	0/0:8,0:8:24.08:0,24,356	0/0:46,0:18:45.12:0,45,628	0/0:31,0:14:39.11:0,39,562	0/0:30,0:30:87.26:0,87,1286	0/0:28,0:28:74.28:0,74,1122	0/0:36,0:36:99:0,100,1491	0/1:13,19:27:96.30:593,0,96	0/0:33,0:33:93.28:0,93,1373	0/0:33,0:33:96.31:0,96,1421	0/0:19,0:19:57.19:0,57,868	0/0:41,0:41:99:0,110,1604	0/0:26,0:25:63.18:0,63,915	0/0:24,0:24:66.22:0,66,1001	0/0:34,0:34:93.25:0,93,1341	0/0:28,0:28:69.23:0,69,1040	0/0:25,0:25:65.29:0,65,878	0/0:17,0:16:36.08:0,36,523	0/1:27,2:23:99:418,0,138	1/1:10,9:19:42.36:786,42,0	0/1:21,4:23:4.92:330,0,5	0/0:23,0:23:63.18:0,63,918	0/0:25,0:25:60.16:0,60,872	0/0:59,0:57:99:0,147,2161	0/0:19,0:19:54.18:0,54,826	0/0:35,0:35:96.30:0,96,1426	0/0:24,0:24:63.15:0,63,887	0/0:15,0:15:42.14:0,42,642
chr10	10244556	.	AACACGC	A	1726.96	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=5.152;DP=721;FS=0.947;HRun=0;HaplotypeScore=194.8210;InbreedingCoeff=0.6396;MQ=51.47;MQ0=14;MQRankSum=-5.272;QD=10.73;ReadPosRankSum=-3.247;VQSLOD=1.9869;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:59.63:0,60,1250	0/0:8,0:8:12.90:0,13,95	0/0:56,0:28:45.87:0,46,385	0/0:61,0:19:33.43:0,33,322	0/0:26,0:26:52.61:0,53,1183	0/1:25,0:25:99:331,0,104	0/1:26,0:26:91.34:91,0,190	1/1:19,0:17:38.86:316,39,0	0/1:37,0:37:99:541,0,170	0/0:24,0:23:38.72:0,39,690	0/0:20,0:20:24.27:0,24,352	0/0:34,0:33:79.25:0,79,1430	0/0:19,0:19:53.10:0,53,1207	0/0:21,0:21:7.85:0,8,813	0/0:34,0:32:49.40:0,49,828	0/0:22,0:22:47.68:0,48,531	0/0:24,0:24:36.45:0,36,326	0/0:16,0:16:26.55:0,27,584	1/1:2,11:13:29.76:232,30,0	1/1:15,3:21:23.90:236,24,0	1/1:20,0:20:18.45:151,18,0	0/0:27,0:27:63.65:0,64,1535	0/0:19,0:19:44.78:0,45,870	0/0:56,0:55:99:0,139,2747	0/0:13,0:13:32.68:0,33,657	0/0:29,0:29:31.76:0,32,809	0/0:17,0:17:33.11:0,33,462	0/0:8,0:8:20.66:0,21,552
chr10	10244561	.	GCACACA	G	1641.15	PASS	AB=0.943;AC=11;AF=0.204;AN=54;BaseQRankSum=2.636;DP=708;FS=8.798;HRun=0;HaplotypeScore=194.2480;InbreedingCoeff=0.4799;MQ=51.18;MQ0=16;MQRankSum=-6.237;QD=9.17;ReadPosRankSum=-2.013;VQSLOD=1.6806;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:27:41.39:0,41,1127	0/0:5,0:7:15.01:0,15,183	./.	0/0:55,0:16:3.01:0,3,43	0/0:23,0:27:46.82:0,47,1113	1/1:9,12:23:34.05:544,34,0	0/1:20,2:25:0.59:260,0,1	0/1:16,0:14:0.32:16,0,0	1/1:14,20:37:41.73:834,42,0	0/0:24,0:24:44.09:0,44,646	0/0:22,0:22:17.78:0,18,268	0/0:31,0:31:48.15:0,48,1249	0/0:19,0:19:29.60:0,30,1005	0/1:19,1:22:25.56:26,0,722	0/0:31,0:32:38.82:0,39,619	0/0:17,0:23:33.08:0,33,548	0/0:22,0:25:9.85:0,10,290	0/0:15,0:15:34.51:0,35,565	0/1:13,0:13:6.87:7,0,24	0/1:22,0:22:14.82:101,0,15	1/1:21,0:21:0.43:1,0,0	0/0:26,0:26:47.91:0,48,1280	0/0:19,0:20:33.10:0,33,848	0/0:54,0:58:95.43:0,95,2453	0/0:10,0:12:23.29:0,23,586	0/0:25,0:26:62.95:0,63,868	0/0:18,0:18:27.03:0,27,425	0/0:5,0:7:21.07:0,21,508
chr10	10245246	.	AGATT	A	4690.62	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=12.304;DP=727;FS=1.969;HRun=0;HaplotypeScore=117.9742;InbreedingCoeff=0.9996;MQ=72.69;MQ0=0;MQRankSum=-6.624;QD=50.44;ReadPosRankSum=-1.743;VQSLOD=5.1956;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:93.32:0,93,2601	0/0:10,0:10:30.10:0,30,838	0/0:31,0:28:84.18:0,84,2167	0/0:26,0:24:62.88:0,63,1589	0/0:29,0:29:87.30:0,87,2366	0/0:18,0:18:54.19:0,54,1477	0/0:34,0:34:99:0,102,2795	1/1:2,27:29:79.51:1557,80,0	0/0:31,0:31:93.28:0,93,2500	0/0:31,0:31:93.32:0,93,2603	0/0:21,0:21:60.21:0,60,1663	0/0:23,0:23:69.22:0,69,1799	0/0:22,0:22:63.19:0,63,1700	0/0:28,0:28:84.29:0,84,2316	0/0:35,0:35:99:0,105,2771	0/0:29,0:29:87.30:0,87,2355	0/0:28,0:28:84.29:0,84,2273	0/0:22,0:22:66.23:0,66,1814	1/1:2,18:20:54.19:1073,54,0	1/1:1,18:19:51.17:990,51,0	1/1:2,23:25:57.13:1071,57,0	0/0:30,0:30:90.31:0,90,2518	0/0:27,0:27:75.26:0,75,2043	0/0:35,0:35:99:0,105,2922	0/0:22,0:22:66.23:0,66,1823	0/0:29,0:29:87.30:0,87,2376	0/0:33,0:33:99:0,99,2767	0/0:9,0:9:27.09:0,27,741
chr10	10245437	.	C	CATG	5678.90	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-0.571;DP=696;FS=11.699;HRun=0;HaplotypeScore=98.7401;InbreedingCoeff=0.9993;MQ=72.24;MQ0=0;MQRankSum=-3.360;QD=53.07;ReadPosRankSum=-4.489;VQSLOD=5.1760;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,99,1641	0/0:9,0:9:24.08:0,24,403	0/0:18,0:17:30.87:0,31,606	0/0:25,0:23:66.06:0,66,973	0/0:28,0:28:78.25:0,78,1304	0/0:22,0:22:66.19:0,66,1071	0/0:26,0:26:78.21:0,78,1269	1/1:6,21:30:75.22:1557,75,0	0/0:22,0:22:57.19:0,57,956	0/0:34,0:34:99:0,102,1643	0/0:19,0:19:57.15:0,57,941	0/0:22,0:22:63.22:0,63,1074	0/0:18,0:18:48.16:0,48,817	0/0:32,0:32:93.30:0,93,1559	0/0:26,0:26:75.25:0,75,1250	0/0:26,0:26:75.24:0,75,1250	0/0:19,0:19:54.18:0,54,920	0/0:26,0:26:75.26:0,75,1278	1/1:4,21:28:81.18:1610,81,0	1/1:4,19:24:60.20:1265,60,0	1/1:2,22:25:57.66:1247,58,0	0/0:36,0:36:99:0,105,1759	0/0:25,0:25:72.25:0,72,1227	0/0:24,0:24:66.23:0,66,1122	0/0:22,0:22:63.20:0,63,1048	0/0:27,0:27:78.27:0,78,1330	0/0:31,0:31:90.30:0,90,1510	0/0:17,0:17:48.16:0,48,818
chr10	10246041	.	C	CTT	6345.29	PASS	AB=0.681;AC=32;AF=0.571;AN=56;BaseQRankSum=-6.165;DP=516;FS=0.378;HRun=10;HaplotypeScore=79.0982;InbreedingCoeff=0.7290;MQ=73.49;MQ0=4;MQRankSum=0.557;QD=19.29;ReadPosRankSum=3.053;VQSLOD=3.8893;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:3,0:21:22.23:76,0,22	1/1:1,11:14:32.59:440,33,0	0/0:19,0:15:5.98:0,6,99	0/1:16,0:8:5.25:7,0,5	0/0:17,0:17:48.07:0,48,479	0/0:20,0:21:47.82:0,48,534	0/0:16,0:16:39.05:0,39,396	0/0:22,0:22:45.03:0,45,458	0/0:11,0:11:33.06:0,33,329	1/1:11,16:28:26.62:707,27,0	1/1:2,6:9:20.98:247,21,0	1/1:3,0:21:45.39:169,45,0	1/1:1,0:17:5.04:85,5,0	0/1:6,1:14:11.15:69,0,11	1/1:1,11:13:26.58:367,27,0	1/1:1,8:9:21.07:313,21,0	1/1:4,28:35:74.22:1030,74,0	1/1:3,21:24:48.13:692,48,0	0/0:20,0:20:51.03:0,51,503	0/0:19,0:20:49.84:0,50,517	0/0:14,0:15:38.77:0,39,357	1/1:3,0:16:12.10:101,12,0	0/1:3,0:17:1.48:82,0,1	1/1:4,2:19:30.33:141,30,0	0/0:25,0:26:53.80:0,54,524	1/1:2,11:13:33.07:449,33,0	1/1:3,13:17:36.12:534,36,0	1/1:2,18:24:59.68:837,60,0
chr10	10246060	.	GA	G	1881.13	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=2.338;DP=523;FS=0.000;HRun=7;HaplotypeScore=89.0668;InbreedingCoeff=0.9659;MQ=77.31;MQ0=3;MQRankSum=0.941;QD=23.81;ReadPosRankSum=-1.401;VQSLOD=2.9333;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:60.19:0,60,754	0/0:14,0:14:33.09:0,33,392	0/0:20,0:15:30.05:0,30,327	0/0:16,1:12:5.26:0,5,55	0/0:14,0:14:36.12:0,36,452	0/0:22,0:22:63.20:0,63,788	0/0:20,0:20:54.16:0,54,665	1/1:5,20:25:60.12:607,60,0	0/0:13,0:13:36.11:0,36,451	0/0:21,0:21:51.16:0,51,641	0/0:11,0:11:30.10:0,30,377	0/0:19,0:19:54.17:0,54,679	0/0:18,0:18:42.12:0,42,515	0/0:13,0:13:25.32:0,25,305	0/0:15,0:15:42.13:0,42,517	0/0:13,0:13:36.12:0,36,453	0/0:32,0:32:75.24:0,75,942	0/0:23,0:23:54.17:0,54,679	1/1:2,19:21:59.96:586,60,0	1/1:4,19:23:60.12:604,60,0	1/1:2,8:10:24.05:245,24,0	0/0:18,0:18:54.17:0,54,679	0/0:17,0:17:51.16:0,51,641	0/0:18,0:17:39.11:0,39,477	0/0:20,0:20:60.19:0,60,755	0/0:18,0:18:48.15:0,48,601	0/0:20,0:20:42.12:0,42,515	0/0:24,0:24:66.21:0,66,829
chr10	10247114	.	T	TA	2468.96	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=-9.684;DP=650;FS=14.543;HRun=10;HaplotypeScore=74.6225;InbreedingCoeff=0.8701;MQ=70.90;MQ0=0;MQRankSum=3.400;QD=20.92;ReadPosRankSum=-3.049;VQSLOD=2.2773;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:48:99:0,119,958	0/0:9,0:9:26.97:0,27,222	0/0:18,0:18:31.31:0,31,216	0/1:14,0:13:9.51:10,0,109	0/0:27,0:27:65.79:0,66,532	0/0:2,0:14:24.44:0,24,71	0/0:0,0:15:26.48:0,26,77	1/1:8,28:36:78.59:795,79,0	0/0:2,0:12:13.83:0,14,41	0/0:29,0:29:71.88:0,72,589	0/0:21,0:21:53.91:0,54,440	0/0:25,0:24:47.67:0,48,392	0/0:26,0:26:65.88:0,66,538	0/0:17,0:17:44.95:0,45,369	0/0:30,0:30:71.55:0,72,573	0/0:19,0:19:44.94:0,45,369	0/0:28,0:28:68.86:0,69,559	0/0:19,0:19:44.92:0,45,366	1/1:4,25:29:78.19:828,78,0	1/1:3,21:25:46.59:628,47,0	1/1:2,12:14:36.06:373,36,0	0/0:23,1:24:32.91:0,33,459	0/0:17,0:18:49.76:0,50,399	0/0:28,0:28:72.38:0,72,591	0/0:27,0:27:68.15:0,68,559	0/0:26,0:26:68.88:0,69,564	0/0:33,0:33:83.84:0,84,686	0/0:16,1:18:14.98:0,15,318
chr10	10247264	.	T	TCAAAACAAAA	28845.50	PASS	AB=0.513;AC=33;AF=0.589;AN=56;BaseQRankSum=17.644;DP=692;FS=0.000;HRun=0;HaplotypeScore=209.4346;InbreedingCoeff=0.9233;MQ=67.05;MQ0=0;MQRankSum=-17.446;QD=67.55;ReadPosRankSum=3.551;VQSLOD=4.4055;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,28:44:36.12:1633,36,0	1/1:3,7:15:18.06:819,18,0	0/0:16,0:15:39.09:0,39,967	0/0:14,0:14:38.93:0,39,1044	0/0:32,0:32:93.30:0,93,2765	0/0:15,0:15:45.14:0,45,1332	0/0:20,0:20:51.17:0,51,1420	0/0:38,0:38:96.28:0,96,2393	0/0:20,0:20:54.17:0,54,1485	1/1:23,12:35:96.16:3447,96,0	1/1:14,9:23:63.02:1871,63,0	1/1:18,10:27:74.96:2151,75,0	1/1:4,6:10:30.03:1191,30,0	1/1:15,7:22:65.91:1919,66,0	1/1:3,19:32:39.07:1840,39,0	0/1:1,14:20:70.02:1188,0,70	1/1:20,6:26:62.61:1542,63,0	1/1:20,5:25:65.89:1751,66,0	0/0:27,0:27:75.02:0,75,1967	0/0:38,0:38:99:0,108,3103	0/0:25,0:25:72.20:0,72,2024	1/1:16,9:25:59.79:1921,60,0	1/1:2,22:29:30.10:1522,30,0	1/1:20,3:23:44.99:1219,45,0	0/0:20,0:20:51.16:0,51,1579	1/1:18,15:33:89.86:2855,90,0	1/1:5,15:25:18.53:912,19,0	1/1:0,11:12:21.07:1065,21,0
chr10	10248572	.	GCACA	G	2825.52	PASS	AB=1.000;AC=16;AF=0.308;AN=52;BaseQRankSum=4.375;DP=648;FS=2.456;HRun=0;HaplotypeScore=201.9068;InbreedingCoeff=0.7754;MQ=58.26;MQ0=7;MQRankSum=-6.426;QD=13.85;ReadPosRankSum=0.764;VQSLOD=3.1913;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:28,7:39:29.10:355,29,0	0/0:7,0:8:17.42:0,17,296	./.	0/0:41,0:24:6.02:0,6,98	0/0:14,0:16:26.78:0,27,486	0/0:26,0:27:17.39:0,17,319	0/0:5,0:26:19.28:0,19,281	./.	0/0:2,0:19:5.96:0,6,76	0/0:26,0:27:47.98:0,48,819	0/0:9,0:10:8.39:0,8,132	1/1:9,12:22:38.46:596,38,0	1/1:11,7:20:30.09:432,30,0	1/1:12,12:27:33.11:502,33,0	0/0:27,0:33:44.32:0,44,718	0/0:26,0:26:36.12:0,36,713	0/0:23,0:27:33.37:0,33,687	0/0:24,0:25:28.91:0,29,543	0/1:19,0:19:14.42:32,0,14	0/1:16,0:16:3.94:109,0,4	0/0:24,0:24:4.96:0,5,48	1/1:9,8:17:19.62:289,20,0	1/1:11,5:17:12.17:272,12,0	1/1:17,10:27:27.03:429,27,0	0/0:24,0:26:50.89:0,51,1097	0/0:17,0:19:35.60:0,36,639	0/0:18,0:21:39.46:0,39,716	0/0:9,0:9:24.06:0,24,419
chr10	10248593	.	CACACACACACACACACAG	C	2878.21	PASS	AB=0.929;AC=7;AF=0.125;AN=56;BaseQRankSum=-3.029;DP=763;FS=3.837;HRun=0;HaplotypeScore=420.2416;InbreedingCoeff=0.8463;MQ=50.05;MQ0=15;MQRankSum=-7.468;QD=27.94;ReadPosRankSum=-4.402;VQSLOD=0.3828;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:77.44:0,77,1953	0/0:11,0:11:15.46:0,15,1406	0/0:30,0:15:23:0,23,696	0/0:54,0:21:51.53:0,52,1133	0/0:25,0:25:63.20:0,63,3115	0/0:19,0:19:25.84:0,26,1541	0/0:24,0:24:45.45:0,45,1888	1/1:36,0:34:95.34:906,95,0	0/0:20,0:20:24.08:0,24,1357	0/0:36,0:36:99:0,105,4788	0/0:16,0:16:32.71:0,33,1375	0/0:34,0:34:88.74:0,89,3291	0/0:26,0:26:66.06:0,66,2199	0/0:36,0:36:64.85:0,65,2570	0/0:37,0:37:93.30:0,93,5269	0/0:24,0:24:63.15:0,63,3985	0/0:31,0:31:74.95:0,75,4346	0/0:25,0:25:71.64:0,72,3463	0/1:12,1:13:8.88:572,0,9	1/1:18,3:21:35.96:1167,36,0	1/1:31,2:31:15.08:381,15,0	0/0:23,0:23:54.10:0,54,1874	0/0:20,0:20:57.16:0,57,1766	0/0:36,0:36:54.26:0,54,1821	0/0:27,0:27:71.86:0,72,4751	0/0:24,0:24:72.23:0,72,3912	0/0:25,0:25:75.24:0,75,4472	0/0:12,0:11:33.10:0,33,1373
chr10	10248607	.	CACAG	C	2068.29	PASS	AB=0.983;AC=14;AF=0.250;AN=56;BaseQRankSum=5.338;DP=773;FS=11.958;HRun=0;HaplotypeScore=278.0990;InbreedingCoeff=0.2483;MQ=51.46;MQ0=15;MQRankSum=-8.780;QD=6.59;ReadPosRankSum=0.898;VQSLOD=1.0535;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:44,0:44:99:141,0,308	0/0:14,0:14:32.87:0,33,485	0/0:33,0:26:52.13:0,52,691	0/0:44,0:18:45.64:0,46,509	0/0:25,0:25:59.95:0,60,852	0/0:22,0:22:29.22:0,29,439	0/0:27,0:27:54.59:0,55,594	1/1:26,0:25:70.99:462,71,0	0/0:19,0:19:34.38:0,34,305	0/0:36,0:36:97.34:0,97,1395	0/0:15,0:15:33:0,33,412	0/1:31,0:31:99:292,0,271	0/1:25,0:25:99:180,0,236	0/1:42,0:42:99:223,0,313	0/0:37,0:37:95.97:0,96,1390	0/0:27,0:27:71.99:0,72,1259	0/0:32,0:32:58.43:0,58,1191	0/0:25,0:25:53.41:0,53,900	1/1:15,0:14:16.26:198,16,0	1/1:21,2:23:16.95:245,17,0	0/1:26,5:29:8.56:105,0,9	0/1:23,0:23:99:125,0,202	0/1:18,0:18:99:108,0,184	0/1:36,0:36:99:163,0,163	0/0:29,0:29:69.15:0,69,1484	0/0:27,0:27:78.33:0,78,1288	0/0:35,0:35:99:0,102,1453	0/0:12,0:11:32.84:0,33,475
chr10	10248626	.	T	TCA	23510.04	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=10.472;DP=802;FS=3.437;HRun=0;HaplotypeScore=207.2844;InbreedingCoeff=0.9993;MQ=57.95;MQ0=3;MQRankSum=-7.223;QD=39.58;ReadPosRankSum=1.721;VQSLOD=4.9045;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,43:49:99:1804,102,0	1/1:0,16:16:45.15:783,45,0	0/0:44,0:43:99:0,106,1321	0/0:42,0:26:66.75:0,67,889	0/0:25,0:25:69.19:0,69,907	0/0:18,0:18:35.87:0,36,469	0/0:30,0:30:69.21:0,69,925	1/1:13,27:40:81.27:1409,81,0	0/0:24,0:24:47.70:0,48,636	1/1:3,27:30:78.25:1284,78,0	1/1:5,14:20:51.17:890,51,0	1/1:4,28:32:84.29:1469,84,0	1/1:3,24:27:69.24:1219,69,0	1/1:5,35:40:93.23:1645,93,0	1/1:3,36:39:99:1754,99,0	1/1:4,22:26:31:1154,31,0	1/1:2,24:26:63.21:1098,63,0	1/1:3,24:28:57.20:1011,57,0	1/1:6,13:19:51.06:805,51,0	1/1:2,19:21:57.19:980,57,0	1/1:5,27:34:45.63:790,46,0	1/1:4,20:25:51.17:902,51,0	1/1:5,15:20:42.14:745,42,0	1/1:8,25:33:50.82:901,51,0	0/0:24,0:24:60.18:0,60,790	1/1:4,24:29:78.23:1309,78,0	1/1:7,22:29:67.69:1185,68,0	1/1:2,7:9:21.96:375,22,0
chr10	10249135	.	CAG	C	2817.19	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-4.023;DP=746;FS=12.612;HRun=0;HaplotypeScore=125.3744;InbreedingCoeff=0.9997;MQ=88.79;MQ0=1;MQRankSum=-0.507;QD=37.07;ReadPosRankSum=2.636;VQSLOD=5.3760;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:57:99:0,172,3203	0/0:11,0:11:33.11:0,33,609	0/0:26,0:26:73.76:0,74,1262	0/0:32,0:32:73.23:0,73,1217	0/0:25,0:25:75.26:0,75,1381	1/1:0,21:21:57.19:839,57,0	1/1:1,25:26:69.23:1016,69,0	0/0:32,0:32:93.31:0,93,1704	1/1:1,28:28:75.25:1105,75,0	0/0:30,0:30:84.29:0,84,1569	0/0:20,0:20:57.20:0,57,1059	0/0:25,0:25:75.26:0,75,1405	0/0:20,0:20:57.18:0,57,1036	0/0:29,0:29:87.30:0,87,1599	0/0:19,0:19:51.17:0,51,948	0/0:25,0:25:72.25:0,72,1341	0/0:52,0:52:99:0,147,2653	0/0:19,0:19:57.20:0,57,1067	0/0:30,0:30:90.31:0,90,1686	0/0:17,0:17:51.17:0,51,929	0/0:50,0:50:99:0,138,2510	0/0:17,0:17:51.15:0,51,921	0/0:23,0:23:63.19:0,63,1095	0/0:30,0:30:81.28:0,81,1517	0/0:21,0:21:60.21:0,60,1124	0/0:24,0:24:66.23:0,66,1229	0/0:26,0:26:78.25:0,78,1397	0/0:10,0:10:30.10:0,30,562
chr10	10249769	.	G	GAGGCCCCAGGACTTCAGGATGGA	62645.45	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=9.042;DP=555;FS=9.731;HRun=0;HaplotypeScore=334.0510;InbreedingCoeff=0.9916;MQ=78.64;MQ0=0;MQRankSum=-17.417;QD=195.16;ReadPosRankSum=2.013;VQSLOD=3.9451;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:38,4:42:99:7768,102,0	1/1:4,1:5:12.03:539,12,0	0/0:15,0:16:31.34:0,31,1311	0/0:21,0:21:29.45:0,29,2075	0/0:21,0:21:60.20:0,60,3084	0/0:22,0:22:63.22:0,63,3699	0/0:21,0:21:60.19:0,60,3005	0/0:29,0:29:66.21:0,66,2659	0/0:27,0:27:78.25:0,78,4379	1/1:14,1:15:39.13:3082,39,0	1/1:9,2:11:26.96:1609,27,0	1/1:28,5:33:93.31:7229,93,0	1/1:16,5:22:60.20:4608,60,0	1/1:15,3:18:48.14:3837,48,0	1/1:17,2:19:48.16:4337,48,0	1/1:10,8:18:48.16:3960,48,0	1/1:18,3:21:48.15:3522,48,0	1/1:8,2:10:17.99:1478,18,0	0/0:16,0:16:42.14:0,42,1945	0/0:12,0:12:33.11:0,33,1484	0/0:38,0:38:99:0,99,5525	1/1:12,2:14:39.13:3619,39,0	1/1:10,1:11:27.09:2064,27,0	1/1:22,4:26:51.10:3550,51,0	0/0:11,0:11:30.10:0,30,1702	1/1:15,6:21:54.13:4869,54,0	1/1:22,6:29:78.24:5606,78,0	1/1:4,2:6:15.03:969,15,0
chr10	10249772	.	G	GC	1233.42	PASS	AB=0.988;AC=18;AF=0.321;AN=56;BaseQRankSum=16.152;DP=555;FS=4.883;HRun=1;HaplotypeScore=247.9254;InbreedingCoeff=-0.3242;MQ=77.23;MQ0=0;MQRankSum=-13.406;QD=3.82;ReadPosRankSum=6.074;VQSLOD=0.3517;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:44,0:44:77.33:77,0,421	0/1:5,0:5:12:12,0,63	0/0:16,0:16:44.73:0,45,470	0/0:19,0:19:31.54:0,32,588	0/0:21,0:21:63.19:0,63,802	0/0:22,0:22:63.20:0,63,818	0/0:21,0:21:60.19:0,60,779	0/0:28,0:28:78.23:0,78,977	0/0:27,0:27:78.25:0,78,1013	0/1:13,1:14:92.23:93,0,92	1/1:14,0:14:3.94:28,4,0	0/1:30,1:31:99:146,0,184	0/1:23,0:23:91.93:178,0,92	0/1:18,1:19:87.43:103,0,87	0/1:18,0:18:49.32:108,0,49	0/1:18,0:18:72.32:72,0,120	0/1:20,0:20:88.38:88,0,90	0/1:10,0:10:5.35:5,0,177	0/0:18,0:18:45.14:0,45,571	0/0:12,0:12:36.12:0,36,467	0/0:36,0:36:99:0,102,1324	0/1:15,0:15:37.02:37,0,60	0/1:11,0:11:20.44:20,0,60	0/1:24,1:25:60.26:120,0,60	0/0:12,0:12:33.09:0,33,412	0/1:22,0:22:72.80:73,0,231	0/1:28,0:28:76.60:227,0,77	0/1:6,0:6:5.76:6,0,47
chr10	10249792	.	T	TC	10661.78	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=16.334;DP=527;FS=10.961;HRun=2;HaplotypeScore=144.0666;InbreedingCoeff=0.9901;MQ=79.82;MQ0=0;MQRankSum=-15.045;QD=36.39;ReadPosRankSum=0.434;VQSLOD=2.8021;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,29:34:72.24:1035,72,0	1/1:1,7:8:18.06:259,18,0	0/0:15,1:16:9.66:0,10,498	0/0:18,0:18:45.05:0,45,497	0/0:22,0:22:63.18:0,63,764	0/0:30,0:30:84.24:0,84,1026	0/0:16,0:16:48.15:0,48,595	0/0:36,0:36:99:0,105,1272	0/0:23,0:23:69.20:0,69,843	1/1:1,12:13:33.11:469,33,0	1/1:2,12:14:33.11:474,33,0	1/1:0,22:22:63.21:905,63,0	1/1:1,22:23:63.21:901,63,0	1/1:0,18:18:42.10:580,42,0	1/1:0,15:15:36.12:517,36,0	1/1:0,19:19:54.18:776,54,0	1/1:0,20:20:54.18:777,54,0	1/1:0,11:12:33.06:451,33,0	0/0:17,0:17:45.14:0,45,558	0/0:14,0:14:42.13:0,42,520	0/0:32,0:32:96.29:0,96,1177	1/1:0,14:14:39.13:560,39,0	1/1:1,8:9:21.07:301,21,0	1/1:1,21:22:49.66:672,50,0	0/0:10,0:10:30.09:0,30,372	1/1:1,18:19:51.17:734,51,0	1/1:1,22:23:66.22:949,66,0	1/1:0,8:8:21.07:302,21,0
chr10	10250124	.	C	CAGAG	132.10	PASS	AB=0.928;AC=6;AF=0.111;AN=54;BaseQRankSum=6.636;DP=461;FS=20.741;HRun=0;HaplotypeScore=143.4511;InbreedingCoeff=-0.0413;MQ=48.98;MQ0=22;MQRankSum=-2.205;QD=2.54;ReadPosRankSum=-5.210;VQSLOD=-0.7055;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:9.50:0,10,187	0/1:10,1:10:49.97:120,0,50	0/0:24,0:9:23.43:0,23,340	0/0:54,0:19:9.80:0,10,283	0/0:21,0:21:52.05:0,52,990	0/0:24,0:23:15.97:0,16,244	0/0:14,0:14:24.55:0,25,475	0/0:27,0:25:69.16:0,69,1292	0/0:16,0:16:30.10:0,30,509	0/0:22,0:21:44.47:0,44,878	0/0:20,0:20:0.33:0,0,177	0/0:10,0:10:3.01:0,3,63	0/0:8,0:8:9:0,9,186	0/0:8,1:8:1.27:0,1,59	1/1:4,1:4:0.47:1,0,0	0/1:10,0:10:37.71:38,0,49	0/0:11,0:9:6.45:0,6,125	0/0:7,0:5:6.91:0,7,127	0/0:26,0:23:59.34:0,59,897	0/0:12,0:12:8.70:0,9,165	0/0:20,0:19:11.93:0,12,224	0/1:15,2:15:30.70:31,0,38	0/0:18,0:17:9.03:0,9,186	./.	0/0:16,0:16:39.12:0,39,761	0/0:20,1:19:32.22:0,32,584	0/0:10,0:10:9.03:0,9,158	0/1:8,1:8:49.75:50,0,206
chr10	10250157	.	CTCTCTGTGTCTCTGTG	C	4399.24	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=-0.759;DP=459;FS=26.231;HRun=0;HaplotypeScore=262.1257;InbreedingCoeff=0.6847;MQ=68.37;MQ0=9;MQRankSum=-4.489;QD=37.92;ReadPosRankSum=2.830;VQSLOD=2.6204;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:2.10:0,2,8	0/0:10,0:10:26.78:0,27,643	0/0:47,0:25:20.27:0,20,1607	0/0:85,0:45:59.33:0,59,2109	0/0:27,0:27:75.26:0,75,5117	1/1:4,15:19:39.13:1536,39,0	1/1:2,9:11:15.05:533,15,0	1/1:12,0:11:3:29,3,0	1/1:8,9:17:21.07:850,21,0	0/0:19,0:19:39.96:0,40,987	0/0:26,0:26:32.92:0,33,569	0/1:6,0:6:0:0,0,0	0/0:11,0:11:3.72:0,4,10	1/1:7,0:6:2.68:11,3,0	0/1:7,0:6:0.06:0,0,0	0/1:7,0:7:1.84:8,0,2	0/0:7,0:6:3.01:0,3,32	0/0:4,0:3:3:0,3,54	1/1:10,2:12:9.03:367,9,0	1/1:3,7:10:27.09:804,27,0	1/1:3,5:8:6.02:262,6,0	0/0:25,0:24:33.43:0,33,511	0/0:23,0:23:37.42:0,37,862	0/0:4,0:3:0:0,0,0	0/0:15,0:15:42.13:0,42,2663	0/0:17,0:16:23.57:0,24,739	0/0:3,0:3:4.91:0,5,21	0/0:9,0:9:21.07:0,21,905
chr10	10250163	.	G	GTC	628.61	PASS	AB=0.951;AC=25;AF=0.463;AN=54;BaseQRankSum=11.239;DP=422;FS=38.498;HRun=0;HaplotypeScore=208.8961;InbreedingCoeff=0.3234;MQ=71.84;MQ0=7;MQRankSum=-7.670;QD=3.11;ReadPosRankSum=2.732;VQSLOD=0.9338;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:5,3:8:37.25:46,0,37	1/1:10,0:10:25.36:233,25,0	0/0:41,0:27:51.52:0,52,861	0/0:70,0:40:42.06:0,42,798	0/0:28,0:28:81.27:0,81,1230	0/1:19,0:19:7.84:8,0,142	0/0:10,0:10:11.78:0,12,101	0/0:9,0:9:24.07:0,24,319	0/0:12,0:12:10.40:0,10,161	0/1:19,0:19:11.78:84,0,12	0/1:26,0:26:50.99:51,0,99	1/1:5,0:5:1.25:3,1,0	0/1:8,2:10:2.83:3,0,36	0/0:5,1:5:0.47:0,0,1	0/1:6,0:6:0.01:0,0,0	1/1:6,0:6:3.77:45,4,0	1/1:6,0:6:2.04:6,2,0	0/1:3,0:3:1.45:1,0,18	0/0:12,0:11:29.80:0,30,308	0/0:9,0:9:14.89:0,15,158	0/1:6,0:6:4.12:4,0,29	1/1:25,2:26:23.42:83,23,0	1/1:21,0:21:26.19:89,26,0	./.	0/0:18,0:18:48.15:0,48,711	0/1:16,0:15:32.62:33,0,38	1/1:3,0:3:2.84:14,3,0	1/1:11,0:11:20.19:92,20,0
chr10	10250165	.	G	GTCTC	5112.54	PASS	AB=0.951;AC=31;AF=0.574;AN=54;BaseQRankSum=7.219;DP=427;FS=21.007;HRun=0;HaplotypeScore=215.2807;InbreedingCoeff=0.4321;MQ=69.14;MQ0=7;MQRankSum=-9.172;QD=21.48;ReadPosRankSum=-0.189;VQSLOD=2.9449;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,1:8:5.04:39,5,0	1/1:5,5:11:14.85:467,15,0	0/0:40,0:27:23.51:0,24,812	0/0:67,0:39:53.69:0,54,856	0/0:28,0:28:78.25:0,78,1404	0/1:18,0:18:16.31:16,0,82	0/0:10,0:10:5.23:0,5,62	0/1:9,0:9:2.65:8,0,3	0/1:13,0:13:4.33:4,0,71	0/1:10,10:21:5.93:702,0,6	1/1:11,16:27:39.47:832,39,0	1/1:5,0:5:1.55:4,2,0	1/1:7,3:10:6.13:23,6,0	0/0:5,0:4:0.47:0,0,1	0/1:6,0:6:0.12:0,0,0	1/1:5,1:6:5.65:18,6,0	1/1:1,4:5:3.01:79,3,0	1/1:2,1:3:5.98:99,6,0	0/0:11,0:10:9.29:0,9,65	0/1:10,0:10:7.65:8,0,29	0/1:6,0:6:4.40:4,0,5	1/1:15,15:29:35.10:803,35,0	1/1:9,12:22:36.02:912,36,0	./.	0/0:18,0:18:54.12:0,54,883	1/1:9,8:16:11.63:534,12,0	0/0:3,1:4:2.60:0,3,10	1/1:3,8:11:14.17:562,14,0
chr10	10250167	.	C	CTG	761.73	PASS	AB=0.849;AC=29;AF=0.537;AN=54;BaseQRankSum=10.988;DP=419;FS=52.520;HRun=0;HaplotypeScore=219.6025;InbreedingCoeff=0.6744;MQ=69.92;MQ0=6;MQRankSum=-7.742;QD=4.10;ReadPosRankSum=4.780;VQSLOD=1.0375;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:7,1:8:3.34:3,0,18	1/1:9,2:11:11.29:70,11,0	0/0:38,0:27:51.66:0,52,871	0/0:67,1:41:65.89:0,66,798	0/0:30,0:30:87.25:0,87,1264	0/0:17,0:17:39.83:0,40,225	0/0:9,0:9:14.19:0,14,78	0/0:8,0:8:20.71:0,21,142	0/0:12,0:12:22.68:0,23,117	1/1:17,4:21:11.06:163,11,0	1/1:22,3:25:9.65:122,10,0	1/1:2,2:4:2.37:8,2,0	0/1:9,1:10:11.50:32,0,11	1/1:2,2:3:0.89:2,1,0	0/1:4,2:6:0.01:0,0,0	1/1:3,3:6:5.63:48,6,0	1/1:3,1:4:2.80:13,3,0	1/1:2,1:3:1.61:10,2,0	0/0:9,0:8:19.24:0,19,124	0/0:10,0:10:26.41:0,26,149	0/0:6,0:6:8.66:0,9,46	1/1:28,3:30:31.37:135,31,0	1/1:21,2:23:33.96:158,34,0	./.	0/0:20,0:20:54.18:0,54,816	1/1:13,2:14:11:75,11,0	1/1:3,1:4:3.01:31,3,0	1/1:11,0:11:18.08:78,18,0
chr10	10250171	.	G	GTC	2121.21	PASS	AB=0.952;AC=42;AF=0.778;AN=54;BaseQRankSum=10.582;DP=402;FS=24.764;HRun=0;HaplotypeScore=217.8633;InbreedingCoeff=0.3110;MQ=67.85;MQ0=3;MQRankSum=-9.283;QD=7.39;ReadPosRankSum=1.216;VQSLOD=1.8250;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,3:7:5.02:51,5,0	1/1:10,0:11:24.04:193,24,0	0/1:35,0:27:7.14:7,0,773	0/0:58,0:38:60.63:0,61,769	0/0:29,0:29:84.28:0,84,1268	1/1:16,0:16:7.64:81,8,0	1/1:9,0:9:2.56:15,3,0	1/1:2,0:4:5.94:40,6,0	0/1:9,0:10:20.40:56,0,20	0/1:23,0:23:22.52:244,0,23	1/1:23,1:24:36.85:302,37,0	1/1:5,0:5:2.19:7,2,0	1/1:6,3:9:8.50:43,8,0	0/1:3,1:3:0:0,0,0	0/1:6,0:6:0.01:0,0,0	1/1:7,0:7:6.28:46,6,0	1/1:3,0:3:3:28,3,0	1/1:3,0:3:3:27,3,0	0/1:5,0:4:7.50:7,0,19	1/1:9,0:10:1.74:90,2,0	1/1:5,0:5:5.44:27,5,0	1/1:31,2:32:34.64:287,35,0	1/1:22,0:22:36.59:323,37,0	./.	0/0:22,0:22:63.15:0,63,892	1/1:16,0:15:4.30:170,4,0	1/1:5,0:5:2.08:7,2,0	1/1:14,0:14:26.91:220,27,0
chr10	10250184	.	TCTTTTC	T	551.38	PASS	AB=0.943;AC=14;AF=0.250;AN=56;BaseQRankSum=7.641;DP=447;FS=18.813;HRun=0;HaplotypeScore=280.3006;InbreedingCoeff=-0.0138;MQ=66.68;MQ0=1;MQRankSum=-6.243;QD=3.08;ReadPosRankSum=-1.884;VQSLOD=0.5976;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:8,0:8:2.38:73,0,2	0/1:12,1:13:99:140,0,579	0/0:32,0:26:70.08:0,70,2088	0/0:46,0:36:54.28:0,54,2073	0/0:33,0:33:99:0,99,3566	0/0:19,0:19:28.64:0,29,357	0/0:12,0:12:23.48:0,23,431	0/0:12,0:12:36.12:0,36,1152	0/0:17,0:17:41.23:0,41,927	0/1:25,0:24:61.44:61,0,907	0/1:25,3:28:59.11:59,0,636	1/1:3,2:5:2.38:36,2,0	0/1:9,1:10:29.63:30,0,60	1/1:4,0:3:3.01:36,3,0	0/0:3,3:6:2.30:0,2,5	0/1:8,1:9:26.24:38,0,26	0/0:2,0:2:2.60:0,3,10	0/0:2,0:2:3.01:0,3,90	0/0:8,0:6:14.63:0,15,311	0/0:18,0:18:47.90:0,48,834	0/0:10,0:10:20.75:0,21,298	0/1:38,2:39:10.11:10,0,847	0/0:22,0:22:46.03:0,46,895	0/0:1,1:2:0:0,0,0	0/0:26,0:26:78.27:0,78,2797	0/1:15,2:17:99:146,0,616	0/1:4,0:4:29.26:29,0,30	0/1:15,1:16:42.42:42,0,724
chr10	10250186	.	TTTTC	T	440.60	PASS	AB=0.874;AC=15;AF=0.278;AN=54;BaseQRankSum=7.756;DP=446;FS=24.319;HRun=0;HaplotypeScore=272.4116;InbreedingCoeff=0.0399;MQ=66.10;MQ0=1;MQRankSum=-5.769;QD=2.53;ReadPosRankSum=-2.255;VQSLOD=1.0405;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:5,1:8:6.10:71,6,0	0/1:11,2:13:99:101,0,465	0/0:29,0:24:67.61:0,68,1585	0/0:46,0:38:64.93:0,65,1677	0/0:33,0:33:99:0,99,2667	0/0:21,0:21:35.49:0,35,544	0/0:12,0:12:15.92:0,16,354	0/0:14,0:14:39.13:0,39,1046	0/0:18,0:18:45.11:0,45,951	0/1:18,4:24:43.31:43,0,731	0/1:24,3:28:65.06:65,0,529	1/1:2,2:5:2.62:34,3,0	0/1:8,1:10:24.25:24,0,58	1/1:1,2:3:3.01:30,3,0	0/0:3,1:5:2.30:0,2,5	0/1:5,3:9:18.83:54,0,19	./.	0/0:1,1:2:3.01:0,3,64	0/0:10,0:8:18.04:0,18,375	0/0:19,0:19:51.16:0,51,941	0/0:10,0:10:21.06:0,21,324	0/1:30,3:36:26.10:26,0,696	0/0:18,2:22:45.55:0,46,812	0/0:2,0:2:0:0,0,0	0/0:27,0:27:81.28:0,81,2191	0/1:13,3:17:89.58:90,0,461	0/1:3,1:4:19.01:19,0,20	0/1:14,0:16:35.66:36,0,609
chr10	10250191	.	T	TG	845.58	PASS	AB=0.934;AC=18;AF=0.333;AN=54;BaseQRankSum=10.469;DP=485;FS=27.730;HRun=0;HaplotypeScore=303.2983;InbreedingCoeff=0.2100;MQ=65.87;MQ0=0;MQRankSum=-8.595;QD=3.74;ReadPosRankSum=-7.396;VQSLOD=0.7345;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:6,4:9:6.91:38,7,0	0/1:15,0:15:99:119,0,230	0/0:32,0:26:66.07:0,66,871	0/0:43,0:35:71.71:0,72,875	0/0:33,0:33:99:0,99,1385	0/0:22,0:22:38.61:0,39,503	0/0:12,0:12:15.94:0,16,212	0/0:17,0:17:48.12:0,48,649	0/0:19,0:19:48.16:0,48,671	0/1:30,3:32:99:131,0,366	0/1:27,2:29:87.73:88,0,242	1/1:6,1:7:6.12:62,6,0	0/1:6,4:10:1.65:2,0,20	1/1:3,0:3:2.74:12,3,0	0/0:5,0:5:1.41:0,1,3	1/1:7,2:9:5.71:26,6,0	./.	0/0:2,0:2:3:0,3,29	0/0:11,0:10:24.08:0,24,334	0/0:21,0:21:54.14:0,54,729	0/0:10,0:10:21.07:0,21,290	0/1:37,2:39:99:202,0,197	0/1:27,0:27:83.57:84,0,348	0/0:3,0:3:0:0,0,0	0/0:28,0:28:84.27:0,84,1161	0/1:20,1:21:97.47:97,0,269	1/1:7,0:7:8.77:78,9,0	0/1:16,0:16:67.58:68,0,341
chr10	10250193	.	C	CTG	210.87	PASS	AB=0.979;AC=14;AF=0.269;AN=52;BaseQRankSum=9.045;DP=502;FS=26.164;HRun=0;HaplotypeScore=322.0466;InbreedingCoeff=0.1389;MQ=65.09;MQ0=0;MQRankSum=-7.592;QD=1.49;ReadPosRankSum=-4.116;VQSLOD=0.9007;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:8,2:9:7.46:47,7,0	0/1:15,0:15:7.96:8,0,281	0/0:30,0:26:69.11:0,69,950	0/0:43,0:35:68.67:0,69,885	0/0:33,0:33:99:0,99,1515	0/0:23,0:23:38.62:0,39,557	0/0:13,0:13:18.93:0,19,254	0/0:19,0:19:48.16:0,48,727	0/0:19,0:19:48.16:0,48,733	0/1:33,0:32:37.92:38,0,415	0/0:29,1:29:0.49:0,0,258	1/1:8,0:8:5.41:26,5,0	0/1:8,2:10:14.11:31,0,14	1/1:5,0:5:1.55:4,2,0	0/1:5,0:5:0:0,0,0	0/1:9,0:9:17.29:27,0,17	./.	0/0:2,0:2:3.01:0,3,38	0/0:12,0:11:30.10:0,30,440	0/0:21,0:21:57.11:0,57,832	0/0:10,0:10:21.07:0,21,320	0/0:40,0:40:43.61:0,44,500	0/0:29,0:29:42.21:0,42,452	./.	0/0:29,0:29:84.22:0,84,1261	0/1:23,0:23:95.80:96,0,283	0/1:8,0:8:37.26:37,0,41	0/1:16,0:16:40.48:40,0,361
chr10	10250203	.	G	GTCTC	7469.71	PASS	AB=1.000;AC=29;AF=0.558;AN=52;BaseQRankSum=11.103;DP=517;FS=42.675;HRun=0;HaplotypeScore=323.1138;InbreedingCoeff=0.7339;MQ=61.01;MQ0=0;MQRankSum=-10.768;QD=27.67;ReadPosRankSum=-3.586;VQSLOD=2.9682;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:10:9.61:49,10,0	1/1:16,0:16:33.29:666,33,0	0/0:31,0:27:57.21:0,57,951	0/0:35,0:28:45.25:0,45,784	0/0:35,0:35:90.30:0,90,1674	0/0:26,0:26:31.12:0,31,773	0/0:17,0:17:30.09:0,30,522	0/1:24,0:21:16.45:16,0,340	0/0:18,0:18:48.16:0,48,905	1/1:31,1:32:25.23:1109,25,0	1/1:30,1:30:45.25:834,45,0	1/1:9,0:9:1.51:5,2,0	0/1:10,0:10:1.98:75,0,2	1/1:7,0:7:4.11:23,4,0	0/1:5,0:5:0.03:0,0,0	1/1:10,0:10:10.98:112,11,0	./.	1/1:2,0:2:3.01:79,3,0	0/0:14,0:12:30.06:0,30,321	0/0:24,0:24:60.12:0,60,724	0/0:9,0:9:3.07:0,3,199	1/1:37,0:37:64.35:1455,64,0	1/1:29,0:29:56.32:1323,56,0	./.	0/0:33,0:33:93.28:0,93,1696	1/1:22,1:23:30.43:733,30,0	1/1:8,0:8:14.49:278,14,0	1/1:12,3:15:30.95:712,31,0
chr10	10250211	.	G	GTC	5562.76	PASS	AB=0.844;AC=26;AF=0.500;AN=52;BaseQRankSum=12.523;DP=527;FS=49.486;HRun=0;HaplotypeScore=323.2774;InbreedingCoeff=0.7809;MQ=65.29;MQ0=0;MQRankSum=-11.272;QD=23.67;ReadPosRankSum=-2.925;VQSLOD=3.2377;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,1:9:6.87:55,7,0	1/1:7,8:15:34.32:498,34,0	0/0:37,0:31:66.85:0,67,905	0/0:39,0:31:47.50:0,47,710	0/0:36,0:36:86.83:0,87,1328	0/0:24,0:24:42.14:0,42,631	0/0:16,0:16:36.04:0,36,549	0/0:25,0:19:45.08:0,45,604	0/0:19,0:19:48.16:0,48,731	1/1:19,13:32:54.88:777,55,0	1/1:17,14:30:31.93:620,32,0	0/0:8,1:9:1.20:0,1,10	0/1:6,5:11:10.42:49,0,10	1/1:7,0:7:0.64:3,1,0	0/1:5,0:5:0:0,0,0	1/1:8,2:10:3.97:63,4,0	./.	1/1:1,1:2:3.01:53,3,0	0/0:18,0:17:41.74:0,42,531	0/0:24,0:24:60.20:0,60,905	0/0:8,0:8:18.06:0,18,261	1/1:14,22:37:64.67:1130,65,0	1/1:9,20:29:56.86:998,57,0	./.	0/0:32,0:32:92.83:0,93,1404	1/1:12,10:22:43.77:525,44,0	1/1:5,4:9:22.79:233,23,0	1/1:6,9:15:36.57:560,37,0
chr10	10250221	.	G	GTC	1842.86	PASS	AB=0.962;AC=32;AF=0.640;AN=50;BaseQRankSum=10.043;DP=478;FS=9.711;HRun=0;HaplotypeScore=309.7907;InbreedingCoeff=0.5218;MQ=63.30;MQ0=3;MQRankSum=-7.441;QD=6.33;ReadPosRankSum=-0.999;VQSLOD=1.8811;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,1:9:8.26:86,8,0	1/1:7,4:11:14.85:146,15,0	0/0:40,0:25:51.09:0,51,668	0/1:39,0:25:14.85:15,0,315	0/0:33,0:33:80.83:0,81,1030	0/0:22,0:22:42.09:0,42,509	0/0:16,0:16:30.10:0,30,394	0/1:19,0:12:15.61:22,0,16	0/0:19,0:19:39.13:0,39,503	1/1:19,7:26:37.46:452,37,0	1/1:12,12:23:9.03:113,9,0	1/1:9,0:9:4.04:16,4,0	0/1:9,2:11:6.33:37,0,6	1/1:6,0:6:2.80:13,3,0	./.	1/1:6,2:8:6.49:84,6,0	./.	1/1:0,1:1:3.01:46,3,0	0/0:19,0:16:8.20:0,8,71	0/1:22,0:22:99:110,0,108	1/1:7,0:7:5.91:38,6,0	1/1:16,16:32:8.80:96,9,0	1/1:17,9:26:15.05:211,15,0	./.	0/0:31,0:31:80.83:0,81,1048	1/1:13,6:19:15.03:185,15,0	1/1:5,4:9:16.94:134,17,0	1/1:6,6:12:17.27:221,17,0
chr10	10250228	.	TCAGA	T	196.06	PASS	AB=0.837;AC=11;AF=0.204;AN=54;BaseQRankSum=4.250;DP=425;FS=8.120;HRun=0;HaplotypeScore=272.4484;InbreedingCoeff=0.3461;MQ=62.02;MQ0=7;MQRankSum=-6.169;QD=2.76;ReadPosRankSum=-1.403;VQSLOD=0.4292;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,4:9:3.09:21,3,0	0/0:8,0:8:13.29:0,13,211	0/0:44,0:23:68.45:0,68,1776	0/0:40,0:22:40.21:0,40,893	0/0:31,0:31:81.22:0,81,2135	0/0:23,0:23:43.39:0,43,924	0/0:16,0:16:29.91:0,30,869	0/0:19,0:10:9.24:0,9,76	0/0:20,0:20:42.14:0,42,1063	0/0:20,0:20:21.54:0,22,625	0/0:17,0:17:3.93:0,4,45	0/1:4,3:7:10.34:10,0,17	0/1:7,2:9:36.03:36,0,37	0/0:4,0:4:3.01:0,3,49	0/1:1,0:1:0:0,0,0	0/0:6,0:6:5.03:0,5,52	./.	0/0:1,0:1:3.01:0,3,65	0/1:15,0:12:57.19:123,0,57	1/1:21,0:21:22.14:116,22,0	1/1:7,0:7:3.85:22,4,0	0/0:23,3:26:8.62:0,9,114	0/0:19,1:20:12.67:0,13,146	0/1:1,1:2:0:0,0,0	0/0:28,0:28:81.28:0,81,2182	0/0:15,0:15:1.86:0,2,347	0/0:8,0:8:10.74:0,11,135	0/0:8,0:8:14.20:0,14,256
chr10	10250229	.	CAGAGTA	C	589.84	PASS	AB=0.923;AC=14;AF=0.269;AN=52;BaseQRankSum=3.677;DP=371;FS=0.820;HRun=0;HaplotypeScore=248.6026;InbreedingCoeff=0.4813;MQ=65.53;MQ0=7;MQRankSum=-4.693;QD=8.31;ReadPosRankSum=-3.254;VQSLOD=2.0464;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:6,0:5:0.03:0,0,0	0/0:7,0:7:12.50:0,12,153	0/0:44,0:23:68.26:0,68,2076	0/0:40,0:22:30.51:0,31,964	0/0:31,0:31:80.78:0,81,1886	0/0:23,0:23:43.23:0,43,608	0/0:16,0:16:29.86:0,30,836	1/1:12,0:4:6.90:71,7,0	0/0:20,0:20:37.47:0,37,883	0/0:16,0:16:37.45:0,37,407	0/0:15,0:15:1.44:0,1,22	0/1:5,0:6:8.08:16,0,8	0/1:4,0:5:17.30:17,0,19	0/0:2,0:4:2.98:0,3,34	./.	0/0:4,0:4:3.47:0,3,27	./.	0/0:1,0:1:3.01:0,3,33	1/1:2,4:6:16.87:266,17,0	1/1:13,4:17:28.09:305,28,0	1/1:2,0:2:5.98:58,6,0	0/0:23,0:23:8.12:0,8,63	0/0:13,0:14:7.42:0,7,74	0/1:2,0:2:0:0,0,0	0/0:28,0:28:81.20:0,81,1879	0/1:11,0:11:1.40:1,0,236	0/0:8,0:8:8.32:0,8,117	0/0:6,0:6:15.01:0,15,142
chr10	10250233	.	GTA	G	999.08	PASS	AB=0.892;AC=30;AF=0.652;AN=46;BaseQRankSum=9.012;DP=355;FS=16.438;HRun=0;HaplotypeScore=225.0940;InbreedingCoeff=0.1985;MQ=64.83;MQ0=7;MQRankSum=-8.119;QD=4.15;ReadPosRankSum=1.444;VQSLOD=1.2886;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:6,0:5:3.55:15,4,0	1/1:7,0:7:11.92:70,12,0	0/0:40,0:21:54.17:0,54,792	0/0:36,0:20:32.85:0,33,384	0/1:22,6:28:24.62:25,0,325	0/1:13,9:22:69.01:124,0,69	0/0:14,1:15:29.69:0,30,226	0/1:12,0:3:12.60:13,0,13	0/1:16,3:19:31.52:32,0,166	1/1:16,0:16:22.21:218,22,0	1/1:15,0:15:7.34:31,7,0	0/1:6,0:6:1.53:4,0,2	1/1:5,0:5:5.84:34,6,0	1/1:4,0:4:2.65:21,3,0	./.	1/1:4,0:4:5.30:26,5,0	./.	./.	0/1:9,0:6:10.47:26,0,10	0/0:17,0:17:9.16:0,9,114	./.	1/1:23,0:23:8.66:50,9,0	1/1:14,0:14:13.54:69,14,0	./.	0/1:17,9:26:99:156,0,215	0/1:11,0:11:1.13:108,0,1	1/1:8,0:8:9.95:54,10,0	1/1:6,0:6:14.22:79,14,0
chr10	10250237	.	CTA	C	1815.54	PASS	AB=0.890;AC=31;AF=0.646;AN=48;BaseQRankSum=9.210;DP=343;FS=24.250;HRun=0;HaplotypeScore=218.4376;InbreedingCoeff=0.4044;MQ=59.32;MQ0=7;MQRankSum=-8.243;QD=8.65;ReadPosRankSum=2.037;VQSLOD=1.8621;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,2:7:3.83:43,4,0	1/1:1,6:7:14.91:157,15,0	0/0:37,0:19:53.81:0,54,685	0/0:29,0:13:21.99:0,22,270	0/0:20,0:26:37.68:0,38,401	0/1:12,0:21:23.11:23,0,124	0/0:14,0:15:29.77:0,30,261	0/1:12,0:3:11.75:13,0,12	0/0:16,0:19:12.76:0,13,229	1/1:1,14:15:36.10:472,36,0	1/1:2,10:12:8.97:79,9,0	1/1:6,1:7:2.30:25,2,0	1/1:3,1:4:1.78:31,2,0	1/1:3,1:4:2.68:38,3,0	./.	1/1:0,4:4:6.01:62,6,0	0/0:1,0:1:2.37:0,2,8	./.	0/1:9,0:6:4:35,0,4	0/1:17,0:17:5.43:5,0,93	./.	1/1:9,14:23:8.92:103,9,0	1/1:8,8:16:14.67:158,15,0	./.	0/1:18,8:27:99:168,0,220	1/1:2,8:10:20.10:256,20,0	1/1:0,8:8:14.91:140,15,0	1/1:1,5:6:15.04:173,15,0
chr10	10250241	.	CTA	C	918.97	PASS	AB=0.950;AC=32;AF=0.640;AN=50;BaseQRankSum=9.888;DP=326;FS=11.964;HRun=0;HaplotypeScore=211.0370;InbreedingCoeff=0.2515;MQ=56.86;MQ0=7;MQRankSum=-8.550;QD=4.22;ReadPosRankSum=2.725;VQSLOD=1.8251;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,0:7:1.67:12,2,0	1/1:6,0:6:11.94:71,12,0	0/0:35,0:16:40.67:0,41,512	0/0:26,0:12:19.61:0,20,253	0/1:25,0:25:28.63:29,0,613	0/1:20,0:20:99:127,0,133	0/0:15,0:15:8.91:0,9,374	0/1:12,0:3:11.65:13,0,12	0/1:17,0:17:31.60:32,0,271	1/1:14,0:14:34.24:228,34,0	1/1:11,0:11:6.95:29,7,0	1/1:7,0:7:3.14:10,3,0	0/1:5,0:5:8.64:9,0,9	1/1:4,0:4:2.64:20,3,0	./.	1/1:4,0:4:5.30:26,5,0	0/0:2,0:2:1.25:0,1,3	./.	0/1:7,4:8:1.02:50,0,1	0/1:16,3:19:10.94:11,0,86	0/1:3,0:3:0:0,0,0	1/1:17,0:17:8.66:50,9,0	1/1:13,0:13:13.41:70,13,0	./.	0/0:27,0:27:20.42:0,20,616	1/1:9,0:9:20.74:156,21,0	1/1:8,0:8:10.21:55,10,0	1/1:5,0:5:14.22:79,14,0
chr10	10250245	.	CTA	C	269.39	PASS	AB=0.968;AC=30;AF=0.600;AN=50;BaseQRankSum=9.220;DP=331;FS=4.905;HRun=0;HaplotypeScore=220.8601;InbreedingCoeff=0.3836;MQ=53.95;MQ0=7;MQRankSum=-6.792;QD=1.41;ReadPosRankSum=3.482;VQSLOD=2.4303;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:9,0:8:0.24:0,0,1	1/1:6,0:6:7.46:23,7,0	0/0:28,0:10:23.92:0,24,297	0/1:25,2:13:20.40:20,0,186	0/0:26,0:26:31.80:0,32,604	0/1:21,0:21:22.37:22,0,177	0/0:17,0:17:32.98:0,33,469	0/0:12,0:3:2.89:0,3,17	0/0:20,0:20:21.60:0,22,418	1/1:14,0:14:25.07:86,25,0	1/1:11,0:11:1.72:4,2,0	0/1:6,1:7:0.71:1,0,1	0/0:6,0:6:6.29:0,6,41	1/1:3,1:4:2.17:9,2,0	./.	1/1:4,0:4:0.72:3,1,0	1/1:2,0:2:2.88:15,3,0	./.	0/1:10,0:8:10.17:48,0,10	0/1:19,0:19:10.21:10,0,88	1/1:4,0:4:1.82:5,2,0	1/1:17,0:17:3.94:10,4,0	1/1:13,1:14:5.15:12,5,0	./.	0/0:28,0:28:28.20:0,28,604	1/1:8,1:9:17.86:99,18,0	1/1:8,0:8:7.12:24,7,0	1/1:5,0:5:10.74:34,11,0
chr10	10250249	.	CTA	C	920.92	PASS	AB=0.987;AC=33;AF=0.635;AN=52;BaseQRankSum=9.294;DP=334;FS=1.983;HRun=0;HaplotypeScore=208.9838;InbreedingCoeff=0.2930;MQ=51.51;MQ0=8;MQRankSum=-7.051;QD=4.70;ReadPosRankSum=4.658;VQSLOD=2.2837;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,0:8:2.44:18,2,0	1/1:6,0:6:13.18:92,13,0	0/0:32,0:10:15.04:0,15,196	0/1:25,0:11:18.63:19,0,151	0/0:29,0:29:38.04:0,38,673	0/1:22,0:21:20.98:21,0,191	0/0:18,0:18:32.98:0,33,452	0/0:12,0:3:2.94:0,3,18	0/0:19,0:19:22.07:0,22,480	0/1:14,0:14:1.48:138,0,1	1/1:11,0:11:7.64:34,8,0	0/1:7,0:7:13.53:14,0,14	0/1:6,0:6:8.02:8,0,53	1/1:3,1:4:2.65:21,3,0	1/1:1,0:1:0.47:1,0,0	1/1:4,0:4:5.77:33,6,0	1/1:1,1:2:3.01:35,3,0	./.	0/1:8,0:7:3.55:58,0,4	0/1:16,1:17:59.81:60,0,72	1/1:4,0:4:2.92:17,3,0	1/1:17,0:17:8.74:55,9,0	1/1:14,1:15:14.16:81,14,0	./.	0/0:26,0:26:28.25:0,28,584	1/1:10,0:10:8.73:171,9,0	1/1:8,0:8:13.38:86,13,0	1/1:5,0:5:14.98:124,15,0
chr10	10250253	.	CTA	C	1355.45	PASS	AB=0.955;AC=34;AF=0.654;AN=52;BaseQRankSum=9.629;DP=329;FS=0.610;HRun=0;HaplotypeScore=203.7752;InbreedingCoeff=0.3306;MQ=51.10;MQ0=9;MQRankSum=-6.755;QD=6.92;ReadPosRankSum=4.734;VQSLOD=3.1937;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,2:10:3.68:37,4,0	1/1:1,5:6:14.52:135,15,0	0/0:34,0:9:17.98:0,18,208	0/1:27,0:12:3.88:4,0,165	0/0:26,0:26:32.19:0,32,639	0/1:20,0:19:20.97:21,0,191	0/0:17,0:17:29.98:0,30,429	0/0:10,0:3:2.23:0,2,18	0/0:18,0:18:22.04:0,22,466	1/1:6,8:14:17.97:196,18,0	1/1:5,5:10:8.91:66,9,0	0/1:6,1:7:19.89:20,0,23	0/1:5,1:6:20.03:20,0,35	1/1:3,1:4:2.68:38,3,0	1/1:1,0:1:0.47:1,0,0	1/1:1,3:4:5.99:50,6,0	1/1:2,0:2:3.01:37,3,0	./.	0/1:8,0:7:10.43:59,0,10	0/1:19,0:19:44.65:65,0,45	1/1:4,0:4:2.94:18,3,0	1/1:10,6:16:8.88:75,9,0	1/1:10,5:15:14.64:130,15,0	./.	0/0:25,0:24:19.22:0,19,475	1/1:4,6:10:8.33:239,8,0	1/1:2,5:7:14.85:148,15,0	1/1:0,5:5:15.04:168,15,0
chr10	10250261	.	CTA	C	329.50	PASS	AB=0.969;AC=25;AF=0.481;AN=52;BaseQRankSum=6.550;DP=314;FS=0.674;HRun=0;HaplotypeScore=190.3210;InbreedingCoeff=0.3015;MQ=50.96;MQ0=9;MQRankSum=-5.166;QD=2.17;ReadPosRankSum=6.384;VQSLOD=2.0575;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:9,3:11:0.76:0,1,3	0/1:5,0:5:1.22:9,0,1	0/0:37,0:14:11.13:0,11,250	0/1:22,2:8:81.80:82,0,111	0/0:28,0:28:38.16:0,38,705	0/1:22,0:21:14.99:15,0,269	0/0:19,0:19:35.97:0,36,477	1/1:8,0:3:0.94:2,1,0	0/0:17,0:17:16.04:0,16,389	0/0:8,0:8:6.85:0,7,18	0/1:6,0:6:0:0,0,0	0/0:7,0:7:3.03:0,3,18	0/1:5,1:6:11.70:32,0,12	1/1:5,1:6:0.56:1,1,0	1/1:1,0:1:0.47:1,0,0	0/0:3,0:3:1.21:0,1,3	1/1:2,0:2:3.01:35,3,0	./.	1/1:9,0:8:11.12:64,11,0	1/1:16,4:20:31.52:180,32,0	1/1:5,1:6:2.94:18,3,0	0/1:11,0:11:0.09:0,0,0	1/1:12,1:13:0.12:1,0,0	./.	0/0:23,0:22:13.19:0,13,372	0/1:8,0:8:9.11:9,0,10	1/1:5,0:5:5.06:15,5,0	0/0:5,0:5:1.41:0,1,11
chr10	10250269	.	CTATCTATCTA	C	1234.31	PASS	AB=0.969;AC=16;AF=0.320;AN=50;BaseQRankSum=5.371;DP=316;FS=7.195;HRun=0;HaplotypeScore=214.1551;InbreedingCoeff=0.1300;MQ=54.51;MQ0=8;MQRankSum=-7.009;QD=7.67;ReadPosRankSum=4.331;VQSLOD=1.6383;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:10,0:9:0.82:3,1,0	0/1:6,0:6:0:0,0,0	0/0:34,0:15:41.84:0,42,499	0/0:21,0:11:9.44:0,9,238	0/1:29,0:29:17.19:17,0,514	0/1:25,0:24:99:150,0,198	0/0:21,0:21:29.73:0,30,372	0/1:12,0:8:9.67:265,0,10	0/1:15,0:15:26.68:27,0,272	0/0:9,0:9:1.08:0,1,14	./.	0/0:6,0:6:4.12:0,4,19	0/1:5,0:5:27.98:28,0,29	0/0:6,0:6:0.47:0,0,1	0/0:3,0:2:0.89:0,1,2	0/1:3,0:3:0:0,0,0	0/0:4,0:4:1.25:0,1,3	./.	0/1:6,5:10:41.15:431,0,41	1/1:12,4:16:24.08:392,24,0	1/1:7,0:6:3.01:44,3,0	0/1:10,0:10:0:0,0,0	0/1:12,0:12:0.01:0,0,0	./.	0/0:23,0:22:46:0,46,994	0/0:8,0:8:15.22:0,15,65	0/0:5,0:5:4.39:0,4,15	0/0:5,0:5:0.88:0,1,2
chr10	10250277	.	CTA	C	1090.57	PASS	AB=0.908;AC=32;AF=0.615;AN=52;BaseQRankSum=8.516;DP=321;FS=18.666;HRun=0;HaplotypeScore=183.0830;InbreedingCoeff=0.1438;MQ=66.31;MQ0=4;MQRankSum=-6.562;QD=5.27;ReadPosRankSum=3.315;VQSLOD=1.6852;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:12:0.76:0,1,3	1/1:6,0:6:2.57:15,3,0	0/0:32,0:19:47.79:0,48,578	0/1:24,0:17:6.82:7,0,343	0/0:29,0:29:49.17:0,49,685	0/1:26,0:25:32.52:33,0,285	0/0:18,0:18:26.89:0,27,313	0/1:1,8:8:9.74:260,0,10	0/0:15,0:15:22.54:0,23,349	1/1:7,0:7:1.23:3,1,0	1/1:5,0:5:0.47:1,0,0	1/1:7,0:7:2.30:35,2,0	0/1:5,0:5:11.88:32,0,12	1/1:6,0:6:2.68:35,3,0	1/1:6,0:5:0.47:1,0,0	0/0:3,0:3:1.25:0,1,3	1/1:6,0:6:3.01:34,3,0	./.	0/1:7,4:10:39.87:285,0,40	1/1:8,10:18:21.95:293,22,0	1/1:4,5:8:3.01:44,3,0	0/1:9,0:9:0:0,0,0	1/1:13,0:13:0.12:1,0,0	./.	0/1:22,0:21:66.43:66,0,292	0/1:7,0:7:0.66:53,0,1	1/1:6,0:6:1.68:11,2,0	1/1:5,0:5:2.90:16,3,0
chr10	10250283	.	C	CTG	452.06	PASS	AB=0.932;AC=24;AF=0.462;AN=52;BaseQRankSum=7.225;DP=322;FS=22.027;HRun=0;HaplotypeScore=172.9545;InbreedingCoeff=0.0231;MQ=75.01;MQ0=2;MQRankSum=-6.208;QD=3.01;ReadPosRankSum=0.231;VQSLOD=1.4550;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:14,1:14:0.49:5,0,0	1/1:4,1:5:2.47:13,2,0	0/0:35,0:23:54.19:0,54,771	0/0:27,0:20:29.38:0,29,499	0/0:29,0:29:43.67:0,44,868	0/0:24,0:24:37.54:0,38,619	0/0:16,0:16:20.88:0,21,321	0/1:14,0:13:99:111,0,119	0/0:14,0:14:34.91:0,35,457	0/1:2,0:2:8.31:8,0,13	0/1:3,1:4:0:0,0,0	0/1:7,1:8:9.53:33,0,10	0/1:5,0:5:7.83:8,0,79	1/1:7,1:8:3.01:37,3,0	1/1:7,0:6:0.89:2,1,0	0/0:2,1:3:1.82:0,2,5	0/1:6,0:6:10.50:11,0,12	./.	0/1:15,0:14:97.48:97,0,114	0/1:15,0:15:7.50:124,0,7	0/1:11,0:10:17.54:18,0,36	0/1:6,2:8:0:0,0,0	1/1:13,0:13:0.47:1,0,0	./.	0/0:20,0:19:52.58:0,53,751	0/1:6,0:6:39.76:68,0,40	0/1:4,3:7:8.41:34,0,8	1/1:1,0:1:2.97:20,3,0
chr10	10251583	.	TCA	T	4970.09	PASS	AB=0.957;AC=32;AF=0.571;AN=56;BaseQRankSum=9.673;DP=691;FS=1.231;HRun=0;HaplotypeScore=179.3681;InbreedingCoeff=0.7252;MQ=63.23;MQ0=7;MQRankSum=-4.513;QD=12.49;ReadPosRankSum=4.799;VQSLOD=4.5647;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:54,1:54:6.54:452,7,0	1/1:17,0:16:13.23:228,13,0	0/0:37,0:22:17.92:0,18,249	0/0:45,0:23:21.43:0,21,304	0/0:32,0:33:36.31:0,36,1037	0/0:26,0:26:59.21:0,59,877	0/0:20,1:21:18.21:0,18,771	0/0:29,0:29:43.69:0,44,334	0/0:32,0:32:75.24:0,75,1160	0/1:18,0:18:39.95:134,0,40	0/1:26,0:26:2.93:287,0,3	1/1:16,0:16:32.29:255,32,0	1/1:27,0:27:42.95:480,43,0	1/1:15,0:15:32.27:249,32,0	1/1:27,0:27:29.13:341,29,0	1/1:18,0:18:40.61:302,41,0	1/1:23,0:22:41.20:311,41,0	1/1:24,0:23:47.69:366,48,0	0/0:15,0:15:21.10:0,21,126	0/0:31,0:31:25.99:0,26,146	0/0:24,0:24:11.39:0,11,104	1/1:10,0:10:20.90:168,21,0	1/1:20,0:19:32.67:232,33,0	0/1:22,0:22:3.05:119,0,3	0/1:19,5:24:99:123,0,611	1/1:27,0:27:63.94:459,64,0	1/1:21,0:21:25.79:369,26,0	1/1:8,0:8:11.96:95,12,0
chr10	10251601	.	ACACG	A	975.87	PASS	AB=0.966;AC=22;AF=0.393;AN=56;BaseQRankSum=8.062;DP=665;FS=2.731;HRun=0;HaplotypeScore=246.6969;InbreedingCoeff=-0.0601;MQ=48.63;MQ0=8;MQRankSum=-9.201;QD=2.33;ReadPosRankSum=-4.289;VQSLOD=1.6859;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:48,1:48:19.23:19,0,53	0/1:21,1:21:8.87:84,0,9	0/0:30,0:14:19.28:0,19,222	0/0:39,0:14:7.95:0,8,210	0/0:30,0:30:83.93:0,84,1681	0/0:24,0:24:60.05:0,60,1014	0/0:24,0:24:66.13:0,66,1040	0/1:21,0:21:45.90:46,0,60	0/0:27,0:27:73.73:0,74,1294	0/1:24,0:23:24.32:115,0,24	0/1:22,1:23:20.82:35,0,21	1/1:18,1:19:2.76:103,3,0	0/1:26,1:27:26:30,0,26	0/1:16,1:17:2.96:72,0,3	0/1:23,1:24:17.30:35,0,17	0/1:17,2:19:3.80:107,0,4	0/1:22,1:22:10.95:53,0,11	0/1:22,0:21:4.87:5,0,16	1/1:17,0:16:4.88:70,5,0	1/1:25,0:25:22.44:83,22,0	1/1:22,0:22:0.85:2,1,0	0/1:12,0:12:8.69:14,0,9	0/1:18,1:18:7.98:41,0,8	0/0:20,0:20:7.32:0,7,20	0/0:26,0:26:68.77:0,69,1098	0/1:31,2:33:43.17:224,0,43	0/0:23,0:22:8.35:0,8,30	0/0:4,0:4:3.54:0,4,8
chr10	10251603	.	ACG	A	11016.53	PASS	AB=1.000;AC=39;AF=0.696;AN=56;BaseQRankSum=7.716;DP=644;FS=2.148;HRun=0;HaplotypeScore=188.6884;InbreedingCoeff=0.6772;MQ=48.49;MQ0=8;MQRankSum=-7.116;QD=24.05;ReadPosRankSum=1.172;VQSLOD=5.0075;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:21,26:46:44.88:986,45,0	1/1:8,11:18:44.81:561,45,0	0/0:27,0:12:9.48:0,9,249	0/0:35,0:12:1.48:0,1,247	0/0:29,0:29:74.74:0,75,1335	0/0:23,0:23:51.03:0,51,1046	0/0:24,0:24:57.03:0,57,1070	0/1:20,0:20:42.93:43,0,129	0/0:27,0:27:78.21:0,78,1380	1/1:14,8:21:14.45:514,14,0	1/1:6,15:21:41.76:594,42,0	1/1:7,12:19:47.67:565,48,0	1/1:7,19:26:75.12:1031,75,0	1/1:4,12:16:38.92:508,39,0	1/1:4,19:23:51.09:742,51,0	1/1:7,12:19:41.96:579,42,0	1/1:5,18:22:46.26:626,46,0	1/1:4,19:22:57.11:785,57,0	1/1:17,0:16:8.37:110,8,0	0/1:25,0:25:29.06:126,0,29	0/0:21,0:21:1.36:0,1,64	1/1:3,9:12:24.07:338,24,0	1/1:6,13:18:36.02:497,36,0	1/1:5,14:19:18.06:262,18,0	0/1:28,0:28:1.84:2,0,872	1/1:14,19:33:98.69:1165,99,0	1/1:7,16:22:55.21:801,55,0	1/1:0,4:4:12.04:182,12,0
chr10	10251605	.	G	GCA	1315.03	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=7.126;DP=644;FS=2.748;HRun=0;HaplotypeScore=229.0411;InbreedingCoeff=0.7283;MQ=48.24;MQ0=9;MQRankSum=-6.672;QD=12.64;ReadPosRankSum=-2.627;VQSLOD=3.1757;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:46:52.74:0,53,254	0/0:20,0:19:9.69:0,10,93	0/0:26,0:12:1.49:0,1,295	0/0:36,0:12:3.91:0,4,214	0/0:30,0:30:85.15:0,85,1158	0/0:25,0:25:66.19:0,66,892	0/0:24,0:24:72.15:0,72,959	1/1:14,5:19:32.18:553,32,0	0/0:26,0:26:75.22:0,75,1034	0/0:22,0:21:18.84:0,19,81	0/0:20,0:20:35.30:0,35,151	0/0:19,0:19:22.94:0,23,108	0/0:25,0:25:48.02:0,48,209	0/0:16,0:16:29.08:0,29,124	0/0:22,0:22:42.11:0,42,172	0/0:19,0:19:38.02:0,38,163	0/0:23,0:22:36.53:0,37,148	0/0:23,0:22:35.28:0,35,144	1/1:15,2:16:36.04:391,36,0	1/1:22,2:24:39.09:470,39,0	1/1:11,9:20:2.62:47,3,0	0/0:12,0:12:14.57:0,15,60	0/0:20,0:19:29.62:0,30,124	0/0:19,0:19:15.35:0,15,69	0/0:29,0:29:81.17:0,81,1048	0/0:33,0:33:44.78:0,45,204	0/1:24,0:23:6.33:6,0,129	0/0:4,0:4:10.71:0,11,45
chr10	10251607	.	ACG	A	2518.96	PASS	AB=0.997;AC=29;AF=0.518;AN=56;BaseQRankSum=13.152;DP=647;FS=78.184;HRun=0;HaplotypeScore=232.1320;InbreedingCoeff=0.0973;MQ=47.75;MQ0=8;MQRankSum=-12.611;QD=5.70;ReadPosRankSum=7.790;VQSLOD=-0.1958;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:45,0:44:47.38:47,0,71	0/1:21,0:20:27.94:28,0,32	0/0:25,0:14:9.59:0,10,469	0/1:31,0:11:13.96:14,0,275	0/0:31,0:31:90.26:0,90,1647	0/0:25,0:25:75.16:0,75,1228	0/0:24,0:24:72.14:0,72,1205	1/1:12,9:21:25:612,25,0	0/0:27,0:27:78.24:0,78,1355	0/0:21,0:20:3.33:0,3,222	1/1:23,0:23:30.32:177,30,0	0/1:20,0:20:54.01:57,0,54	1/1:23,0:23:11.47:94,11,0	0/1:16,0:16:16:56,0,16	1/1:23,0:23:2.49:56,2,0	0/1:19,0:19:24.15:65,0,24	0/1:22,0:21:11.51:42,0,12	0/1:22,0:22:21.25:36,0,21	1/1:13,9:21:49.29:589,49,0	1/1:5,18:23:39.13:563,39,0	1/1:13,5:18:2.65:44,3,0	0/1:12,0:12:11.58:27,0,12	1/1:20,0:19:1.71:41,2,0	0/0:21,0:21:10.20:0,10,34	0/0:29,0:29:66.49:0,66,1343	0/1:33,0:33:67.78:68,0,150	0/1:22,0:21:55.12:55,0,88	1/1:4,0:4:7.31:29,7,0
chr10	10251612	.	CGT	C	1113.76	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=7.724;DP=627;FS=2.545;HRun=0;HaplotypeScore=249.2541;InbreedingCoeff=0.9190;MQ=45.98;MQ0=8;MQRankSum=-8.610;QD=14.85;ReadPosRankSum=-2.089;VQSLOD=3.0890;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:44:63.77:0,64,971	0/0:19,0:19:43.50:0,44,550	0/0:28,0:17:18.44:0,18,782	0/0:29,0:10:11:0,11,295	0/0:31,0:31:90.31:0,90,1792	0/0:26,0:26:78.27:0,78,1484	0/0:22,0:22:66.23:0,66,1256	1/1:18,3:21:38.38:414,38,0	0/0:25,0:25:75.24:0,75,1409	0/0:21,0:20:60.13:0,60,913	0/0:24,0:24:37.68:0,38,513	0/0:20,0:20:46.05:0,46,609	0/0:23,0:23:62.13:0,62,866	0/0:16,0:16:38.48:0,38,556	0/0:21,0:21:44.24:0,44,702	0/0:20,0:20:20.62:0,21,553	0/0:23,0:22:43.23:0,43,632	0/0:20,0:20:46.66:0,47,720	1/1:15,6:20:47.57:452,48,0	1/1:20,0:20:39.01:371,39,0	1/1:11,2:13:2.64:28,3,0	0/0:11,0:11:19.60:0,20,230	0/0:22,0:21:32.30:0,32,525	0/0:22,0:22:16.41:0,16,247	0/0:25,1:26:39.66:0,40,1425	0/0:32,0:32:67.53:0,68,1350	0/0:22,0:21:51.79:0,52,842	0/0:4,0:4:11.71:0,12,169
chr10	10251621	.	GCA	G	7077.92	PASS	AB=0.764;AC=42;AF=0.750;AN=56;BaseQRankSum=14.490;DP=593;FS=0.401;HRun=0;HaplotypeScore=223.5078;InbreedingCoeff=0.8117;MQ=45.39;MQ0=7;MQRankSum=-13.601;QD=16.93;ReadPosRankSum=1.987;VQSLOD=4.7963;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:13,26:38:26.59:319,27,0	1/1:5,11:16:17.03:256,17,0	0/0:33,0:21:51.06:0,51,739	0/0:27,0:12:18.74:0,19,284	0/0:29,1:30:40.40:0,40,1166	0/0:30,0:30:81.16:0,81,1243	0/1:19,2:21:21.54:22,0,730	1/1:12,7:19:27.08:313,27,0	0/0:29,0:29:75.24:0,75,1206	1/1:4,16:19:51.16:630,51,0	1/1:5,20:25:34.09:428,34,0	1/1:3,15:18:39:459,39,0	1/1:4,14:18:36.11:453,36,0	1/1:6,12:18:30.05:359,30,0	1/1:8,10:18:21.04:237,21,0	1/1:3,14:17:33.07:389,33,0	1/1:9,11:19:12.04:150,12,0	1/1:7,10:17:27.08:335,27,0	1/1:10,11:21:42.60:512,43,0	1/1:7,13:20:39.02:463,39,0	1/1:7,5:12:2.64:36,3,0	1/1:4,5:9:14.98:168,15,0	1/1:8,13:21:9.03:112,9,0	0/1:6,10:16:0:0,0,0	0/0:26,0:26:60.17:0,60,952	1/1:5,23:28:72.21:895,72,0	1/1:6,14:19:37.36:429,37,0	1/1:3,2:5:9.03:112,9,0
chr10	10251623	.	A	ACG	1280.47	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=7.749;DP=602;FS=3.979;HRun=0;HaplotypeScore=255.9612;InbreedingCoeff=0.6528;MQ=46.04;MQ0=7;MQRankSum=-8.567;QD=10.94;ReadPosRankSum=-3.580;VQSLOD=2.4367;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:39:37.41:0,37,220	0/0:17,0:17:30.75:0,31,179	0/0:33,0:21:47.49:0,47,680	0/0:25,0:11:21.39:0,21,298	0/0:30,0:30:90.05:0,90,1227	0/0:30,0:30:90.22:0,90,1239	0/0:21,0:21:22.17:0,22,755	1/1:18,3:21:45.19:506,45,0	0/0:28,0:28:84.22:0,84,1188	0/1:21,0:20:10.03:10,0,181	0/0:28,0:28:39.59:0,40,219	0/0:19,0:19:19.73:0,20,176	0/0:18,0:18:20.84:0,21,193	0/0:18,0:18:20.04:0,20,198	0/0:18,0:18:37.68:0,38,259	0/0:16,0:16:26.97:0,27,145	0/0:19,0:18:14.40:0,14,178	0/0:18,0:18:2.71:0,3,160	1/1:16,6:22:48.80:555,49,0	1/1:20,1:21:38.87:320,39,0	1/1:11,1:12:2.60:23,3,0	0/0:8,0:8:14.37:0,14,76	0/0:21,0:21:25.82:0,26,180	0/1:15,0:15:0.17:0,0,0	0/0:24,0:24:69.13:0,69,962	0/0:31,0:31:26.81:0,27,353	0/0:22,0:21:35.46:0,35,193	0/1:5,0:5:23.13:23,0,63
chr10	10251644	.	C	CATATAT	13685.76	PASS	AB=0.793;AC=42;AF=0.750;AN=56;BaseQRankSum=15.263;DP=549;FS=0.771;HRun=0;HaplotypeScore=246.2384;InbreedingCoeff=0.7736;MQ=51.75;MQ0=3;MQRankSum=-15.171;QD=35.36;ReadPosRankSum=-3.106;VQSLOD=3.6744;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,0:43:79.56:355,80,0	1/1:4,11:15:33.11:1121,33,0	0/0:19,0:16:31.99:0,32,518	0/1:19,0:13:3.65:4,0,270	0/0:33,0:33:90.25:0,90,1990	0/0:32,0:32:96.23:0,96,2133	0/0:25,0:25:72.18:0,72,1508	1/1:14,0:28:41.45:868,41,0	0/0:26,0:26:78.14:0,78,1513	1/1:7,14:22:56.63:1817,57,0	1/1:9,17:26:47.99:1631,48,0	0/1:5,0:17:7.68:132,0,8	1/1:7,0:18:23.96:99,24,0	1/1:4,0:13:24.71:110,25,0	1/1:6,5:11:15.05:510,15,0	1/1:7,7:15:27.09:830,27,0	1/1:8,7:15:26.22:835,26,0	1/1:7,8:15:33.97:983,34,0	1/1:7,0:17:34.19:542,34,0	1/1:10,0:20:33.11:533,33,0	1/1:5,0:6:2.74:48,3,0	1/1:3,0:5:5.42:22,5,0	1/1:2,0:17:40.37:165,40,0	1/1:2,0:11:5.49:24,5,0	0/0:25,0:25:69.22:0,69,1539	1/1:14,11:29:65.72:1499,66,0	1/1:9,11:20:45.07:1332,45,0	1/1:1,2:3:8.99:224,9,0
chr10	10251665	.	T	TA	2094.63	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=3.663;DP=477;FS=0.510;HRun=2;HaplotypeScore=180.2697;InbreedingCoeff=0.7944;MQ=57.39;MQ0=3;MQRankSum=-5.826;QD=28.31;ReadPosRankSum=-3.255;VQSLOD=2.3947;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:42:99:0,111,1354	0/0:13,0:13:39.08:0,39,459	0/1:12,0:10:7.48:7,0,156	0/0:11,0:8:3.42:0,3,177	0/0:28,0:28:84.25:0,84,1025	0/0:30,0:30:87.27:0,87,1077	0/0:21,0:21:63.17:0,63,748	1/1:8,20:28:81:992,81,0	0/0:23,0:23:69.18:0,69,818	0/0:22,0:22:66.11:0,66,761	0/0:21,0:21:63.09:0,63,719	0/0:13,0:13:39.11:0,39,466	0/0:14,0:14:35.77:0,36,403	0/0:10,0:10:26.99:0,27,286	0/0:10,0:10:30.03:0,30,351	0/0:11,0:11:33.03:0,33,374	0/0:13,0:13:33.02:0,33,389	0/0:17,0:17:44.95:0,45,483	1/1:4,12:16:44.96:528,45,0	1/1:1,15:16:48.09:645,48,0	1/1:0,2:2:6.02:78,6,0	0/0:8,0:8:24.06:0,24,283	0/0:17,0:17:50.99:0,51,581	0/0:11,0:11:21.06:0,21,250	0/0:24,0:24:69.17:0,69,824	0/0:20,0:20:60.05:0,60,679	0/0:21,0:21:60.15:0,60,712	0/0:2,0:2:6.02:0,6,74
chr10	10252327	.	GTT	G	1327.56	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=12.036;DP=656;FS=1.709;HRun=3;HaplotypeScore=91.1969;InbreedingCoeff=0.8780;MQ=90.07;MQ0=0;MQRankSum=-6.412;QD=18.19;ReadPosRankSum=-1.253;VQSLOD=0.7149;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,135,2540	0/0:12,0:13:35.48:0,35,645	0/0:28,0:27:74.14:0,74,1096	0/0:31,0:31:79.47:0,79,1384	0/0:24,0:24:69.23:0,69,1269	0/0:27,0:27:81.27:0,81,1500	0/0:28,0:28:84.29:0,84,1567	1/1:4,8:12:2.98:228,3,0	0/0:20,0:20:60.19:0,60,1111	0/0:25,0:25:75.26:0,75,1448	0/0:16,0:16:48.16:0,48,897	0/0:21,0:21:60.19:0,60,1095	0/0:18,0:18:54.18:0,54,1007	0/0:27,0:27:78.27:0,78,1474	0/0:23,0:23:69.24:0,69,1315	0/0:17,0:17:51.17:0,51,985	0/0:25,0:25:75.26:0,75,1416	0/0:30,0:30:90.19:0,90,1562	1/1:3,14:17:36.72:422,37,0	1/1:4,15:19:9.30:410,9,0	1/1:6,19:25:3.12:404,3,0	0/0:22,0:22:63.12:0,63,1108	0/0:29,0:29:87.29:0,87,1632	0/0:24,0:24:72.25:0,72,1358	0/0:33,0:33:96.23:0,96,1735	0/0:21,0:21:63.20:0,63,1154	0/0:23,0:23:66.19:0,66,1188	0/0:13,0:13:36.12:0,36,695
chr10	10252331	.	CT	C	1124.76	PASS	AB=0.556;AC=7;AF=0.125;AN=56;BaseQRankSum=12.168;DP=655;FS=1.683;HRun=3;HaplotypeScore=79.0954;InbreedingCoeff=0.8428;MQ=89.67;MQ0=0;MQRankSum=-6.329;QD=14.80;ReadPosRankSum=-1.779;VQSLOD=2.5482;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,129,1932	0/0:14,0:14:38.92:0,39,551	0/0:25,0:25:69.23:0,69,1020	0/0:30,0:30:81.27:0,81,1130	0/0:23,0:23:66.21:0,66,969	0/0:27,0:27:81.27:0,81,1204	0/0:28,0:28:84.25:0,84,1200	0/1:2,8:10:13.53:147,0,14	0/0:20,0:20:60.20:0,60,894	0/0:26,0:26:78.26:0,78,1153	0/0:17,0:17:51.17:0,51,764	0/0:20,0:20:60.19:0,60,880	0/0:18,0:18:54.16:0,54,786	0/0:26,0:26:72.24:0,72,1079	0/0:24,0:24:72.22:0,72,1055	0/0:17,0:17:51.17:0,51,765	0/0:27,0:27:81.26:0,81,1182	0/0:30,0:30:90.26:0,90,1320	1/1:2,17:19:34.75:431,35,0	1/1:4,17:21:29.56:328,30,0	1/1:4,22:26:21.23:367,21,0	0/0:21,0:21:63.21:0,63,934	0/0:28,0:28:81.27:0,81,1214	0/0:24,0:24:72.23:0,72,1054	0/0:32,0:32:96.33:0,96,1436	0/0:22,0:22:66.22:0,66,989	0/0:22,0:22:60.20:0,60,894	0/0:13,0:13:36.12:0,36,532
chr10	10252725	.	GAA	G	2668	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=11.446;DP=619;FS=4.714;HRun=2;HaplotypeScore=117.2433;InbreedingCoeff=0.9963;MQ=94.09;MQ0=0;MQRankSum=-10.329;QD=39.24;ReadPosRankSum=-3.017;VQSLOD=2.7534;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,148,2935	0/0:10,0:10:30.07:0,30,569	0/0:32,0:32:96.32:0,96,1833	0/0:24,0:24:69.11:0,69,1216	0/0:14,0:14:42.14:0,42,838	0/0:27,0:27:81.28:0,81,1646	0/0:29,0:29:87.27:0,87,1664	1/1:0,22:22:57.18:905,57,0	0/0:29,0:29:87.30:0,87,1734	0/0:19,0:19:57.20:0,57,1143	0/0:12,0:12:36.12:0,36,723	0/0:32,0:32:93.32:0,93,1866	0/0:17,0:17:51.18:0,51,1036	0/0:17,0:17:51.18:0,51,1027	0/0:28,0:28:84.26:0,84,1635	0/0:11,0:11:33.11:0,33,662	0/0:38,0:38:99:0,114,2260	0/0:25,0:25:75.26:0,75,1496	1/1:0,12:12:36.12:586,36,0	1/1:0,9:9:18.06:289,18,0	1/1:0,25:25:66.22:1048,66,0	0/0:24,0:24:72.23:0,72,1409	0/0:13,0:13:39.13:0,39,784	0/0:31,0:31:93.32:0,93,1889	0/0:23,0:23:69.24:0,69,1401	0/0:17,0:17:51.18:0,51,1037	0/0:23,0:23:66.23:0,66,1329	0/0:7,0:7:21.07:0,21,383
chr10	10253155	.	G	GA	29862.83	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-0.479;DP=788;FS=5.166;HRun=0;HaplotypeScore=127.6344;InbreedingCoeff=0.9999;MQ=82.27;MQ0=0;MQRankSum=-7.487;QD=42.97;ReadPosRankSum=4.477;VQSLOD=3.9526;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,68:70:99:3109,196,0	1/1:1,12:13:36.12:575,36,0	0/0:17,0:17:46.91:0,47,655	0/0:27,0:28:62.89:0,63,970	0/0:26,0:26:78.26:0,78,1088	1/1:0,18:18:42.14:672,42,0	1/1:1,49:50:99:2159,135,0	1/1:2,20:22:60.19:932,60,0	1/1:0,28:28:75.26:1199,75,0	1/1:2,25:27:78.23:1215,78,0	1/1:1,15:16:36.12:574,36,0	1/1:0,27:27:75.26:1199,75,0	1/1:1,28:29:75.26:1199,75,0	1/1:0,25:25:66.23:1055,66,0	1/1:0,35:35:87.30:1391,87,0	1/1:1,30:31:90.31:1437,90,0	1/1:0,27:27:78.27:1247,78,0	1/1:1,21:22:60.20:959,60,0	1/1:3,24:27:69.24:1096,69,0	1/1:0,22:23:69.23:1086,69,0	1/1:3,48:51:99:2325,147,0	1/1:0,18:18:48.16:767,48,0	1/1:0,20:20:50.91:810,51,0	1/1:0,36:36:96.33:1533,96,0	0/0:22,0:22:66.21:0,66,906	1/1:3,26:29:84.17:1260,84,0	1/1:1,36:37:90.31:1438,90,0	1/1:0,14:14:39.13:623,39,0
chr10	10253256	.	G	GC	5539.02	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=9.317;DP=798;FS=1.121;HRun=2;HaplotypeScore=119.4226;InbreedingCoeff=0.9965;MQ=89.40;MQ0=0;MQRankSum=-5.252;QD=38.73;ReadPosRankSum=-0.943;VQSLOD=4.2068;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:63,0:63:99:0,181,2202	0/0:10,0:10:27.08:0,27,334	0/0:35,0:36:99:0,101,1180	0/0:24,0:24:66.20:0,66,816	0/0:10,0:10:27.08:0,27,335	0/0:13,0:13:33.09:0,33,395	0/0:36,0:36:96.29:0,96,1178	1/1:2,37:39:99:1483,108,0	0/0:38,0:38:99:0,108,1338	0/0:30,0:30:84.26:0,84,1042	0/0:20,0:20:60.04:0,60,695	0/0:35,0:35:99:0,102,1228	0/0:31,0:31:93.24:0,93,1112	0/0:33,0:33:96.30:0,96,1190	0/0:40,0:40:99:0,120,1488	0/0:31,0:30:90.25:0,90,1090	0/0:30,0:29:87.21:0,87,1058	0/0:28,0:28:84.23:0,84,1025	1/1:3,21:25:66.22:947,66,0	1/1:3,16:19:42.14:604,42,0	1/1:1,59:60:99:2505,175,0	0/0:21,0:21:57.17:0,57,694	0/0:24,0:24:72.18:0,72,854	0/0:34,0:34:99:0,102,1264	0/0:9,0:9:24.07:0,24,298	0/0:20,0:20:60.16:0,60,711	0/0:33,0:33:93.19:0,93,1116	0/0:6,0:6:18.06:0,18,223
chr10	10253664	.	AC	A	2127.30	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=8.524;DP=497;FS=1.008;HRun=6;HaplotypeScore=53.3078;InbreedingCoeff=0.9977;MQ=77.67;MQ0=0;MQRankSum=-2.306;QD=25.94;ReadPosRankSum=-0.384;VQSLOD=3.4612;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:69.22:0,69,907	0/0:11,0:11:30.10:0,30,394	0/0:13,0:13:35.70:0,36,420	0/0:10,0:10:29.96:0,30,333	0/0:12,0:12:33.11:0,33,433	0/0:15,0:15:45.09:0,45,556	0/0:28,0:28:78.03:0,78,978	1/1:1,18:19:54.13:580,54,0	0/0:25,0:25:75.20:0,75,931	0/0:13,0:13:27.08:0,27,342	0/0:16,0:16:42.13:0,42,538	0/0:16,0:16:48.15:0,48,619	0/0:21,0:21:60.17:0,60,762	0/0:17,0:17:51.01:0,51,608	0/0:17,0:17:48.16:0,48,631	0/0:21,0:21:57.16:0,57,721	0/0:31,0:31:87.27:0,87,1130	0/0:12,0:11:36.12:0,36,473	1/1:1,19:20:57.14:612,57,0	1/1:1,11:12:30.07:322,30,0	1/1:2,29:31:72.18:774,72,0	0/0:18,0:18:48.15:0,48,620	0/0:12,0:12:27.09:0,27,354	0/0:22,0:22:66.21:0,66,867	0/0:9,0:9:21.07:0,21,276	0/0:16,0:16:45.15:0,45,591	0/0:18,0:18:54.16:0,54,692	0/0:15,0:15:45.15:0,45,591
chr10	10253987	.	CCTATCTAT	C	1125.05	PASS	AB=1.000;AC=13;AF=0.250;AN=52;BaseQRankSum=3.415;DP=496;FS=3.894;HRun=0;HaplotypeScore=142.4712;InbreedingCoeff=0.2200;MQ=67.15;MQ0=2;MQRankSum=-6.279;QD=6.90;ReadPosRankSum=-2.178;VQSLOD=2.2930;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:44,0:44:7.69:8,0,475	1/1:5,0:5:12:204,12,0	./.	./.	1/1:6,8:15:14.19:186,14,0	0/0:21,0:23:23.99:0,24,468	0/0:19,0:19:17.85:0,18,409	0/0:27,0:27:8.93:0,9,66	0/0:21,0:21:6.01:0,6,76	0/1:15,0:14:86.91:88,0,87	0/0:8,0:8:8.86:0,9,60	0/0:23,0:23:24.03:0,24,301	0/1:25,0:25:56.39:56,0,199	0/0:25,0:25:12.03:0,12,148	0/0:24,0:24:27.02:0,27,287	0/0:25,0:25:27.09:0,27,947	0/0:20,0:20:9.03:0,9,122	0/1:11,0:11:32.81:106,0,33	0/1:14,0:13:54.93:99,0,55	0/0:9,0:9:5.88:0,6,36	0/0:23,0:23:11.64:0,12,90	0/1:8,0:8:10.07:108,0,10	0/1:10,0:10:10.06:101,0,10	0/0:15,0:15:5.94:0,6,44	1/1:14,2:16:15.05:328,15,0	0/0:15,0:15:27.08:0,27,915	0/0:18,0:17:18.02:0,18,625	0/0:12,0:12:9.03:0,9,148
chr10	10254034	.	A	ATCTATCTATCTC	1143.34	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=-5.275;DP=484;FS=8.898;HRun=0;HaplotypeScore=170.2283;InbreedingCoeff=0.3047;MQ=55.71;MQ0=10;MQRankSum=-3.043;QD=7.62;ReadPosRankSum=-2.605;VQSLOD=0.8821;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:3.94:0,4,375	0/0:8,0:8:7.70:0,8,176	0/0:24,0:16:35.64:0,36,294	0/0:20,0:14:30.73:0,31,299	0/0:14,0:14:20.97:0,21,156	1/1:15,0:16:32.97:519,33,0	1/1:20,0:20:35.76:365,36,0	0/0:27,0:26:28.35:0,28,265	1/1:2,19:24:3.01:177,3,0	0/0:16,0:15:26.92:0,27,317	0/0:9,0:9:23.71:0,24,174	0/0:19,0:19:12.02:0,12,272	0/1:30,0:29:19.71:20,0,178	0/0:16,0:16:9.03:0,9,242	0/0:20,0:20:12.04:0,12,295	0/0:21,0:21:49.14:0,49,695	0/1:23,0:22:5.27:5,0,230	0/0:13,0:13:11.23:0,11,173	0/0:16,0:13:26.60:0,27,308	0/0:7,0:7:5.85:0,6,34	0/0:13,0:13:14.36:0,14,109	0/1:14,0:14:73.31:73,0,163	0/1:11,0:11:48.94:110,0,49	0/1:12,0:12:28:28,0,123	0/0:15,0:15:32.99:0,33,314	0/0:15,0:15:42.04:0,42,728	0/0:9,0:8:4.05:0,4,387	0/0:14,0:14:8.96:0,9,182
chr10	10254038	.	ATCTC	A	4087.98	PASS	AB=0.918;AC=35;AF=0.625;AN=56;BaseQRankSum=1.192;DP=489;FS=3.319;HRun=0;HaplotypeScore=112.4561;InbreedingCoeff=0.3728;MQ=57.09;MQ0=6;MQRankSum=-0.638;QD=11.52;ReadPosRankSum=1.694;VQSLOD=3.2330;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:7,32:39:15.05:249,15,0	1/1:4,4:8:24.02:267,24,0	0/0:30,0:20:40.58:0,41,441	0/0:24,0:18:32.54:0,33,374	0/0:14,0:14:19.45:0,19,143	0/1:14,2:16:58.33:58,0,256	0/0:21,0:21:11.80:0,12,334	1/1:27,0:27:54.80:376,55,0	0/0:23,0:23:6.87:0,7,49	1/1:2,0:11:29.92:245,30,0	0/1:8,0:9:7.24:131,0,7	1/1:4,15:19:11.91:169,12,0	1/1:1,27:28:14.53:205,15,0	1/1:0,16:16:9.03:159,9,0	1/1:2,15:17:12.04:212,12,0	0/1:22,0:22:99:244,0,257	1/1:3,20:22:9.02:159,9,0	1/1:11,2:13:25.21:218,25,0	0/1:6,0:13:40.85:124,0,41	0/0:1,0:7:5.85:0,6,34	0/1:12,0:12:28.56:50,0,29	1/1:12,4:16:41.97:387,42,0	1/1:11,3:14:33.34:336,33,0	1/1:10,1:11:17.95:147,18,0	0/0:15,0:15:2.97:0,3,198	0/1:16,0:16:99:195,0,270	0/1:9,0:8:28.92:29,0,202	1/1:0,14:14:8.99:126,9,0
chr10	10254046	.	ATCTC	A	3991.82	PASS	AB=1.000;AC=37;AF=0.685;AN=54;BaseQRankSum=1.750;DP=467;FS=3.172;HRun=0;HaplotypeScore=108.8632;InbreedingCoeff=0.6759;MQ=59.28;MQ0=5;MQRankSum=-0.662;QD=12.75;ReadPosRankSum=3.179;VQSLOD=3.3770;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:35,1:36:8.26:222,8,0	1/1:4,4:8:22.27:231,22,0	0/0:35,0:24:67.11:0,67,1537	0/0:29,0:23:51.07:0,51,1360	0/0:14,0:14:17.69:0,18,396	0/0:16,0:16:28.43:0,28,558	0/0:21,0:21:36.45:0,36,789	1/1:22,0:22:59.12:459,59,0	0/0:16,0:16:9.03:0,9,171	1/1:12,0:11:27.32:229,27,0	1/1:9,0:9:20.71:157,21,0	1/1:15,0:15:11.91:175,12,0	1/1:24,2:26:12.41:169,12,0	1/1:17,0:17:12.02:182,12,0	1/1:16,0:16:12.04:211,12,0	0/1:22,0:22:99:263,0,256	1/1:22,0:22:12.01:181,12,0	1/1:12,2:14:33.25:277,33,0	1/1:8,0:8:14.75:155,15,0	./.	1/1:9,0:9:8.51:63,9,0	1/1:11,4:15:35.95:289,36,0	1/1:11,3:14:26.62:223,27,0	1/1:8,1:9:17.95:147,18,0	0/0:17,0:17:33.11:0,33,788	0/1:15,0:15:99:200,0,264	0/1:9,0:9:29.92:30,0,207	1/1:15,0:15:9.46:127,9,0
chr10	10254099	.	CTCCA	C	616.80	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=1.661;DP=409;FS=0.000;HRun=0;HaplotypeScore=74.7991;InbreedingCoeff=0.8896;MQ=60.23;MQ0=3;MQRankSum=2.379;QD=16.23;ReadPosRankSum=1.799;VQSLOD=2.6451;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:15.05:0,15,344	0/0:6,0:6:12.03:0,12,244	0/0:34,0:17:18:0,18,296	0/0:30,0:23:21.33:0,21,500	0/0:16,0:16:39.13:0,39,908	1/1:6,6:12:21.07:348,21,0	1/1:4,8:11:6.02:100,6,0	0/0:18,0:18:30.10:0,30,520	1/1:9,5:14:18.06:301,18,0	0/0:10,0:10:27.09:0,27,587	0/0:11,0:11:24.08:0,24,559	0/0:14,0:14:24.08:0,24,579	0/0:17,0:17:12.04:0,12,264	0/0:7,0:7:9.03:0,9,194	0/0:17,0:17:27.09:0,27,629	0/0:18,0:18:36.12:0,36,823	0/0:11,0:11:18.06:0,18,445	0/0:12,0:12:24.08:0,24,540	0/0:8,0:8:15.05:0,15,256	0/0:10,0:10:18.53:0,19,307	0/0:9,0:9:18.04:0,18,290	0/0:17,0:17:42.13:0,42,904	0/0:11,0:11:27.09:0,27,561	0/0:16,0:16:34.33:0,34,697	0/0:20,0:20:39.13:0,39,809	0/0:12,0:12:24.08:0,24,558	0/0:13,0:13:33.11:0,33,790	0/0:17,0:17:30.10:0,30,736
chr10	10254145	.	C	CATCT	2818.44	PASS	AB=0.786;AC=31;AF=0.574;AN=54;BaseQRankSum=-2.977;DP=307;FS=8.949;HRun=0;HaplotypeScore=68.2404;InbreedingCoeff=0.4937;MQ=51.65;MQ0=4;MQRankSum=-1.238;QD=14.38;ReadPosRankSum=-1.542;VQSLOD=1.3290;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:8:12.04:0,12,186	1/1:2,1:3:3.01:70,3,0	./.	0/0:11,0:6:1.25:0,1,3	0/0:10,0:14:12.01:0,12,112	1/1:4,0:10:3.01:52,3,0	1/1:14,0:13:11.12:138,11,0	1/1:19,0:19:5.98:81,6,0	1/1:7,1:9:8.99:143,9,0	1/1:11,0:15:14.97:205,15,0	1/1:4,0:8:2.73:19,3,0	0/0:12,0:12:15.05:0,15,232	0/0:8,0:10:21.04:0,21,283	0/0:8,0:8:18.06:0,18,278	1/1:9,6:15:12.04:281,12,0	1/1:9,0:9:15.04:306,15,0	1/1:8,3:11:12.04:280,12,0	0/1:6,3:9:37.36:131,0,37	0/0:4,0:4:3.01:0,3,46	0/1:5,9:14:25.33:400,0,25	1/1:7,2:9:2.95:175,3,0	0/1:13,0:13:27.35:27,0,213	0/0:9,0:9:21.06:0,21,302	0/0:11,0:11:3.01:0,3,46	0/0:3,0:9:9.01:0,9,84	1/1:5,8:13:21.07:480,21,0	1/1:11,0:11:3.01:70,3,0	1/1:10,4:13:6.02:141,6,0
chr10	10255056	.	T	TC	1793.93	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=12.685;DP=642;FS=0.992;HRun=0;HaplotypeScore=135.4244;InbreedingCoeff=0.9995;MQ=74.11;MQ0=0;MQRankSum=-11.560;QD=24.24;ReadPosRankSum=-0.609;VQSLOD=3.9580;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,132,1807	0/0:13,0:13:39.12:0,39,528	0/0:14,0:14:33.53:0,34,423	0/0:13,0:13:31.50:0,31,387	0/0:29,0:29:81.22:0,81,1132	0/0:29,0:28:87.28:0,87,1200	0/0:23,0:23:66.20:0,66,891	1/1:7,17:24:63.12:639,63,0	0/0:29,0:29:87.29:0,87,1215	0/0:33,0:33:99:0,99,1361	0/0:24,0:24:72.23:0,72,987	0/0:20,0:20:54.17:0,54,738	0/0:22,0:22:57.18:0,57,780	0/0:17,0:17:51.17:0,51,711	0/0:26,0:26:78.25:0,78,1074	0/0:21,0:21:63.21:0,63,881	0/0:19,0:19:57.17:0,57,764	0/0:21,0:21:60.20:0,60,839	1/1:5,18:23:63.13:651,63,0	1/1:0,18:18:48:436,48,0	1/1:0,9:9:26.98:228,27,0	0/0:27,0:27:78.25:0,78,1074	0/0:18,0:18:48.16:0,48,671	0/0:21,0:21:57.18:0,57,780	0/0:30,0:30:90.30:0,90,1258	0/0:27,0:27:81.27:0,81,1132	0/0:22,0:22:66.22:0,66,918	0/0:24,0:24:72.24:0,72,993
chr10	10255059	.	TTACCATAG	T	4484.88	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=10.050;DP=649;FS=0.455;HRun=0;HaplotypeScore=221.9787;InbreedingCoeff=0.9996;MQ=74.01;MQ0=0;MQRankSum=-10.760;QD=59.80;ReadPosRankSum=-1.144;VQSLOD=4.3667;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,144,6057	0/0:12,0:12:36.12:0,36,1596	0/0:15,0:15:39.08:0,39,1149	0/0:12,0:12:33.05:0,33,925	0/0:29,0:29:83.60:0,84,3800	0/0:29,0:28:87.28:0,87,3867	0/0:24,0:24:72.25:0,72,3130	1/1:1,25:26:75.09:1423,75,0	0/0:29,0:29:87.29:0,87,3736	0/0:34,0:34:99:0,102,4488	0/0:25,0:25:75.26:0,75,3219	0/0:19,0:19:51.17:0,51,2140	0/0:22,0:22:60.21:0,60,2626	0/0:20,0:20:60.20:0,60,2596	0/0:26,0:26:78.27:0,78,3306	0/0:22,0:22:66.23:0,66,2964	0/0:19,0:19:57.20:0,57,2516	0/0:21,0:21:60.21:0,60,2524	1/1:0,23:23:68.92:1418,69,0	1/1:2,15:17:45.13:1031,45,0	1/1:0,9:9:27.09:614,27,0	0/0:26,0:26:78.27:0,78,3422	0/0:18,0:18:54.19:0,54,2397	0/0:20,0:20:54.13:0,54,2192	0/0:30,0:30:90.31:0,90,4032	0/0:27,0:27:81.28:0,81,3666	0/0:22,0:22:66.23:0,66,2886	0/0:24,0:24:72.25:0,72,3248
chr10	10255089	.	GCTCC	G	8478.68	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=6.515;DP=628;FS=3.530;HRun=0;HaplotypeScore=162.4663;InbreedingCoeff=0.9995;MQ=80.40;MQ0=0;MQRankSum=-5.981;QD=52.02;ReadPosRankSum=4.200;VQSLOD=5.9430;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,38:39:99:2213,111,0	0/0:10,0:10:30.10:0,30,838	0/0:28,0:28:71.27:0,71,2090	0/0:8,0:8:24.08:0,24,591	0/0:27,0:27:78.27:0,78,2178	0/0:25,0:24:75.26:0,75,2103	0/0:24,0:24:72.25:0,72,2013	0/0:29,0:29:84.29:0,84,2206	0/0:23,0:23:69.24:0,69,1926	0/0:30,0:30:90.31:0,90,2513	0/0:26,0:26:78.27:0,78,2161	1/1:0,17:17:42.14:836,42,0	1/1:1,21:22:54.19:1076,54,0	1/1:1,19:20:54.19:1068,54,0	0/0:19,0:19:57.20:0,57,1593	0/0:26,0:26:72.25:0,72,2006	0/0:22,0:22:66.19:0,66,1783	0/0:17,0:17:51.15:0,51,1365	0/0:22,0:22:66.23:0,66,1829	0/0:18,0:18:51.15:0,51,1320	0/0:17,0:17:45.05:0,45,1184	1/1:1,28:29:72.25:1431,72,0	1/1:1,16:17:48.16:957,48,0	1/1:1,18:19:45.15:898,45,0	0/0:25,0:25:75.26:0,75,2079	0/0:28,0:28:78.27:0,78,2172	0/0:21,0:21:63.20:0,63,1668	0/0:20,0:19:57.20:0,57,1564
chr10	10255568	.	A	ATT	13561.32	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-3.750;DP=618;FS=0.688;HRun=8;HaplotypeScore=122.1369;InbreedingCoeff=0.9969;MQ=70.17;MQ0=0;MQRankSum=-2.356;QD=35.59;ReadPosRankSum=3.225;VQSLOD=3.8660;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,44:52:99:1886,128,0	1/1:2,11:13:33.07:495,33,0	0/0:14,0:13:17.94:0,18,179	0/0:13,0:13:23.56:0,24,227	0/0:25,0:25:63.16:0,63,702	0/0:13,0:13:33.08:0,33,368	0/0:30,0:31:81.15:0,81,886	0/0:27,0:27:63.11:0,63,689	0/0:24,0:24:72.19:0,72,802	1/1:5,23:28:69.24:1094,69,0	1/1:4,16:20:45.15:714,45,0	1/1:2,20:22:54.18:857,54,0	1/1:5,12:21:39.13:599,39,0	1/1:5,19:24:51.17:808,51,0	1/1:3,8:12:23.91:348,24,0	1/1:3,16:20:41.36:627,41,0	1/1:3,24:28:65.55:1027,66,0	1/1:4,12:16:33.07:487,33,0	0/0:22,0:22:41.90:0,42,467	0/0:25,0:25:69.18:0,69,769	0/0:29,0:29:78.19:0,78,859	1/1:4,24:28:75.13:1105,75,0	1/1:6,14:21:51.56:749,52,0	1/1:1,30:32:78.22:1210,78,0	0/0:14,0:14:42.11:0,42,468	1/1:4,15:19:48.13:719,48,0	1/1:3,14:19:38.32:550,38,0	1/1:0,6:6:18.06:286,18,0
chr10	10256316	.	GGT	G	5795.18	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=4.719;DP=684;FS=9.712;HRun=0;HaplotypeScore=130.2103;InbreedingCoeff=0.9994;MQ=84.90;MQ0=0;MQRankSum=-1.770;QD=47.12;ReadPosRankSum=-2.088;VQSLOD=4.4697;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,123,2421	0/0:13,0:13:39.12:0,39,738	0/0:20,0:20:60.16:0,60,1165	0/0:23,0:23:63.19:0,63,1178	0/0:21,0:21:60.21:0,60,1209	0/0:20,0:20:60.21:0,60,1218	0/0:29,0:29:87.30:0,87,1747	1/1:0,22:22:66.20:1029,66,0	0/0:23,0:23:69.22:0,69,1330	0/0:25,0:25:75.26:0,75,1524	0/0:18,0:18:54.19:0,54,1096	0/0:27,0:27:81.28:0,81,1634	0/0:17,0:17:51.17:0,51,1009	0/0:25,0:25:75.26:0,75,1507	0/0:18,0:18:54.19:0,54,1097	0/0:22,0:22:66.23:0,66,1341	0/0:34,0:34:99:0,102,2073	0/0:25,0:25:75.24:0,75,1488	1/1:0,27:27:81.27:1292,81,0	1/1:0,39:39:99:1860,114,0	1/1:0,35:35:99:1615,99,0	0/0:19,0:19:57.20:0,57,1157	0/0:19,0:19:57.20:0,57,1158	0/0:27,0:26:81.28:0,81,1645	0/0:18,0:18:51.18:0,51,1036	0/0:32,0:32:96.33:0,96,1951	0/0:36,0:36:99:0,108,2153	0/0:9,0:9:24.08:0,24,487
chr10	10256708	.	TTC	T	12969.80	PASS	AB=0.538;AC=33;AF=0.589;AN=56;BaseQRankSum=10.661;DP=571;FS=5.729;HRun=0;HaplotypeScore=70.6339;InbreedingCoeff=0.9217;MQ=77.38;MQ0=0;MQRankSum=0.020;QD=35.53;ReadPosRankSum=0.563;VQSLOD=7.0446;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:93.28:0,93,1535	0/1:1,6:7:33.82:209,0,34	0/0:19,0:18:32.25:0,32,539	0/0:8,0:8:15.95:0,16,253	0/0:33,0:33:99:0,99,1644	1/1:0,31:31:78.26:1179,78,0	1/1:1,16:17:38.72:554,39,0	1/1:1,31:32:92.80:1260,93,0	1/1:0,22:22:57.19:862,57,0	1/1:1,22:23:62.67:907,63,0	1/1:0,29:29:84.16:1193,84,0	0/0:13,0:13:39.12:0,39,637	0/0:17,0:17:51.16:0,51,854	0/0:14,0:14:39.10:0,39,619	1/1:1,16:17:30.10:454,30,0	1/1:1,18:19:39.13:590,39,0	1/1:0,34:34:84.28:1270,84,0	1/1:0,31:31:72.20:1054,72,0	1/1:2,23:25:68.73:899,69,0	1/1:1,26:27:72.04:951,72,0	1/1:2,9:11:15:200,15,0	0/0:11,0:11:33.09:0,33,517	0/0:16,0:16:48.11:0,48,759	0/0:19,0:19:57.18:0,57,957	0/0:25,0:25:72.21:0,72,1177	1/1:1,13:14:42.11:595,42,0	1/1:0,11:11:27.09:408,27,0	1/1:1,14:15:27.04:384,27,0
chr10	10256933	.	A	AG	5208.52	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-12.599;DP=584;FS=4.475;HRun=3;HaplotypeScore=57.2730;InbreedingCoeff=0.9982;MQ=84.25;MQ0=0;MQRankSum=-0.503;QD=36.17;ReadPosRankSum=4.281;VQSLOD=5.3883;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,39:41:99:1470,105,0	0/0:7,0:7:18.06:0,18,216	0/0:13,0:13:33.08:0,33,370	0/0:22,0:22:48.37:0,48,555	0/0:20,0:20:57.17:0,57,684	0/0:16,0:16:48.15:0,48,576	0/0:22,0:22:60.15:0,60,695	0/0:27,0:27:66.19:0,66,783	0/0:23,0:23:69.21:0,69,827	0/0:15,0:15:36.11:0,36,432	0/0:18,0:18:48.15:0,48,574	1/1:0,15:15:42.14:588,42,0	1/1:1,25:26:63.21:882,63,0	1/1:0,15:15:36.12:504,36,0	0/0:23,0:23:63.19:0,63,755	0/0:16,0:16:42.13:0,42,502	0/0:30,0:30:87.25:0,87,1033	0/0:23,0:23:63.17:0,63,741	0/0:17,0:17:48.15:0,48,575	0/0:25,0:25:72.22:0,72,864	0/0:56,0:56:99:0,159,1908	1/1:1,10:11:27.09:378,27,0	1/1:1,17:18:48.16:672,48,0	1/1:0,18:18:51.17:714,51,0	0/0:19,0:19:54.17:0,54,647	0/0:14,0:14:42.13:0,42,502	0/0:20,0:20:57.16:0,57,672	0/0:14,0:14:39.12:0,39,468
chr10	10257900	.	CA	C	1876.83	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.733;DP=675;FS=3.492;HRun=1;HaplotypeScore=69.8437;InbreedingCoeff=0.9930;MQ=83.05;MQ0=0;MQRankSum=-3.816;QD=37.54;ReadPosRankSum=3.977;VQSLOD=4.3627;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:41:99:0,120,1879	0/0:8,0:8:24.07:0,24,360	0/0:23,0:23:61.72:0,62,900	0/0:30,0:30:84.09:0,84,1217	0/0:15,0:15:36.12:0,36,576	0/0:20,0:20:57.16:0,57,855	0/0:31,0:31:90.31:0,90,1438	0/0:28,0:28:84.27:0,84,1300	0/0:35,0:35:99:0,105,1618	0/0:20,0:20:60.20:0,60,957	0/0:7,0:7:21.07:0,21,335	0/0:19,0:19:51.17:0,51,803	0/0:27,0:27:81.21:0,81,1216	0/0:24,0:23:66.20:0,66,1008	0/0:33,0:33:93.32:0,93,1482	0/0:28,0:28:84.27:0,84,1318	1/1:0,50:50:99:1972,141,0	0/0:21,0:21:63.21:0,63,1007	0/0:21,0:21:63.18:0,63,942	0/0:14,0:14:42.14:0,42,671	0/0:57,0:57:99:0,165,2538	0/0:12,0:12:36.12:0,36,565	0/0:15,0:15:42.14:0,42,668	0/0:28,0:28:78.18:0,78,1149	0/0:12,0:12:36.12:0,36,575	0/0:22,0:22:66.18:0,66,1023	0/0:23,0:23:69.24:0,69,1092	0/0:10,0:10:30.10:0,30,479
chr10	10258083	.	TACAC	T	681.04	PASS	AC=6;AF=0.125;AN=48;BaseQRankSum=-2.730;DP=430;FS=3.844;HRun=0;HaplotypeScore=87.1316;InbreedingCoeff=0.5301;MQ=46.51;MQ0=12;MQRankSum=4.367;QD=11.74;ReadPosRankSum=3.400;VQSLOD=2.7727;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:9.50:0,10,148	0/0:5,0:5:3.89:0,4,35	./.	./.	0/0:23,0:23:9:0,9,86	1/1:10,10:19:24.08:380,24,0	1/1:10,11:22:15.05:237,15,0	0/0:23,0:23:24.04:0,24,357	1/1:9,7:16:12.04:190,12,0	0/0:4,0:3:3.01:0,3,50	./.	0/0:15,0:12:3.48:0,3,47	0/0:11,0:11:0.47:0,0,1	0/0:13,0:12:3.90:0,4,47	0/0:22,0:22:1.36:0,1,3	0/0:6,0:6:3.84:0,4,20	0/0:16,0:16:13.70:0,14,172	0/0:6,0:7:9.03:0,9,172	0/0:13,0:17:21.07:0,21,345	0/0:8,0:11:3.89:0,4,34	0/0:13,0:12:6.02:0,6,90	0/0:11,0:11:3.01:0,3,48	./.	0/0:27,0:22:9.46:0,9,115	0/0:9,0:8:3.48:0,3,35	0/0:13,0:14:21.03:0,21,302	0/0:17,0:16:18.06:0,18,281	0/0:15,0:16:12.04:0,12,197
chr10	10258200	.	CG	C	722.59	PASS	AB=0.909;AC=13;AF=0.250;AN=52;BaseQRankSum=-0.101;DP=243;FS=17.952;HRun=10;HaplotypeScore=44.8341;InbreedingCoeff=0.5693;MQ=79.84;MQ0=0;MQRankSum=-1.949;QD=10.18;ReadPosRankSum=5.318;VQSLOD=0.6484;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	0/0:5,0:5:2.97:0,3,20	0/0:23,0:21:37.97:0,38,331	0/0:17,0:15:29.42:0,29,239	0/0:10,0:11:14.42:0,14,157	0/0:9,0:9:15.04:0,15,166	0/1:9,1:10:8.03:8,0,104	1/1:8,13:22:38.97:339,39,0	0/0:3,0:3:6:0,6,58	0/0:8,0:8:6.02:0,6,66	1/1:5,1:6:2.98:26,3,0	0/0:6,0:5:2.88:0,3,15	0/0:2,0:2:2.97:0,3,20	0/0:8,0:8:5.93:0,6,40	0/0:4,0:4:5.99:0,6,50	0/0:4,0:4:7.24:0,7,54	0/0:12,0:12:17.95:0,18,157	0/0:15,1:16:6.94:0,7,247	1/1:5,10:16:32.01:266,32,0	1/1:2,4:6:8.99:78,9,0	1/1:1,8:9:18.47:157,18,0	./.	0/0:3,0:3:3:0,3,25	1/1:2,0:1:0.47:1,0,0	0/0:8,0:8:15.01:0,15,147	0/0:4,0:5:0:0,0,0	0/0:14,0:14:32.96:0,33,292	0/0:9,0:9:11.97:0,12,108
chr10	10260249	.	A	AT	4248.01	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-11.509;DP=708;FS=4.801;HRun=4;HaplotypeScore=69.8943;InbreedingCoeff=0.9998;MQ=86.50;MQ0=0;MQRankSum=-1.961;QD=33.98;ReadPosRankSum=-3.951;VQSLOD=3.7035;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,132,1473	0/0:16,0:16:47.80:0,48,517	0/0:26,0:26:62.81:0,63,697	0/0:25,0:25:66.15:0,66,724	0/0:20,0:20:60.14:0,60,659	0/0:17,0:17:51.13:0,51,568	0/0:38,0:38:99:0,108,1222	1/1:5,36:41:99:1457,108,0	0/0:26,0:26:72.18:0,72,799	0/0:22,0:22:51.13:0,51,571	0/0:13,0:13:33.09:0,33,374	0/0:27,0:27:78.22:0,78,884	0/0:24,0:24:60.13:0,60,665	0/0:27,0:27:81.23:0,81,917	0/0:32,0:32:90.26:0,90,1021	0/0:21,0:21:54.15:0,54,613	0/0:33,0:33:99:0,99,1122	0/0:28,0:28:81.23:0,81,919	1/1:4,19:23:60.14:780,60,0	1/1:2,21:23:57.19:779,57,0	1/1:2,36:38:90.30:1231,90,0	0/0:13,0:13:36.10:0,36,406	0/0:21,0:21:57.14:0,57,637	0/0:38,0:38:99:0,102,1130	0/0:15,0:15:39.10:0,39,435	0/0:16,0:16:42.11:0,42,468	0/0:20,0:20:51.13:0,51,563	0/0:16,0:16:42.09:0,42,464
chr10	10260888	.	AG	A	15279.81	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=9.180;DP=589;FS=0.357;HRun=3;HaplotypeScore=59.0872;InbreedingCoeff=0.9644;MQ=80.96;MQ0=0;MQRankSum=-2.717;QD=34.34;ReadPosRankSum=3.873;VQSLOD=5.2795;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,37:40:99:1265,102,0	1/1:0,8:8:21.07:260,21,0	0/0:15,0:15:42.14:0,42,592	0/0:18,1:19:48.13:0,48,643	1/1:1,21:22:63.20:781,63,0	1/1:1,22:23:63.20:775,63,0	1/1:1,17:18:45.14:558,45,0	0/0:20,0:20:54.11:0,54,690	1/1:0,23:23:69.22:855,69,0	1/1:1,22:23:63.20:780,63,0	1/1:0,14:14:36.11:446,36,0	1/1:0,30:30:81.25:1004,81,0	1/1:0,12:12:36.11:446,36,0	1/1:0,19:19:57.18:707,57,0	1/1:0,17:17:51.16:632,51,0	1/1:1,16:17:45.14:558,45,0	1/1:0,34:34:96.30:1190,96,0	1/1:0,24:24:72.23:893,72,0	0/0:29,0:29:87.29:0,87,1252	0/0:17,0:17:48.13:0,48,669	0/0:44,0:44:99:0,129,1854	1/1:0,13:13:36.11:446,36,0	1/1:0,13:13:39.12:483,39,0	1/1:0,28:28:72.23:893,72,0	1/1:1,21:22:57.18:707,57,0	1/1:1,21:22:63.20:781,63,0	1/1:0,21:21:63.20:781,63,0	1/1:0,2:2:3.01:37,3,0
chr10	10261714	.	G	GCACACACACACA	11251.07	PASS	AB=1.000;AC=46;AF=0.852;AN=54;BaseQRankSum=-1.195;DP=651;FS=1.178;HRun=0;HaplotypeScore=196.2481;InbreedingCoeff=0.5057;MQ=50.94;MQ0=21;MQRankSum=-1.556;QD=22.96;ReadPosRankSum=1.962;VQSLOD=4.0453;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:37:0:0,0,0	1/1:7,0:16:12.04:495,12,0	0/0:52,0:22:8.10:0,8,137	0/0:59,0:29:7.41:0,7,177	1/1:11,0:25:13.45:404,13,0	./.	0/1:22,0:22:0.06:0,0,0	1/1:26,0:25:2.51:571,3,0	0/1:13,0:13:0:0,0,0	1/1:36,0:36:66.23:1810,66,0	1/1:1,0:8:3.01:111,3,0	1/1:12,12:31:12.04:501,12,0	1/1:3,8:14:15.05:736,15,0	1/1:5,12:22:12.04:604,12,0	1/1:7,0:20:9.03:397,9,0	1/1:1,0:7:3.01:130,3,0	1/1:24,0:21:21.47:507,21,0	1/1:10,0:10:6.02:106,6,0	1/1:14,0:19:27.09:835,27,0	1/1:17,0:18:20.81:711,21,0	1/1:28,0:25:32.71:662,33,0	1/1:16,12:33:9.50:448,10,0	1/1:12,5:22:9.03:321,9,0	1/1:11,5:19:9.16:472,9,0	1/1:9,0:20:12.04:427,12,0	1/1:20,0:18:20.96:534,21,0	1/1:2,0:17:7.58:314,8,0	1/1:6,0:15:3.01:157,3,0
chr10	10261877	.	T	TGCGC	1361.47	PASS	AB=1.000;AC=20;AF=0.435;AN=46;BaseQRankSum=-4.701;DP=396;FS=1.629;HRun=0;HaplotypeScore=111.9241;InbreedingCoeff=0.7770;MQ=54.81;MQ0=10;MQRankSum=-0.511;QD=9.20;ReadPosRankSum=-1.917;VQSLOD=2.3373;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:76.09:0,76,784	1/1:1,5:6:2.79:28,3,0	./.	./.	0/0:12,0:12:14.37:0,14,67	./.	./.	0/1:17,0:15:21.24:21,0,40	./.	1/1:12,0:11:15.02:187,15,0	0/1:9,0:9:0:0,0,0	0/0:22,0:21:39.89:0,40,483	0/0:10,0:10:20.42:0,20,130	0/0:19,0:19:32.78:0,33,382	1/1:9,0:9:12.03:142,12,0	1/1:9,0:9:3.01:67,3,0	1/1:26,1:26:12.04:222,12,0	1/1:6,18:24:8.68:176,9,0	0/0:16,0:14:17.66:0,18,258	0/0:15,0:15:34.52:0,35,361	0/0:24,0:23:48.71:0,49,536	0/0:18,0:18:11.46:0,11,212	0/0:19,0:19:29.18:0,29,289	0/0:20,0:20:23.12:0,23,254	0/0:15,0:15:17.08:0,17,115	1/1:12,0:12:21:277,21,0	1/1:14,0:13:17.13:194,17,0	1/1:8,0:7:15.05:225,15,0
chr10	10264366	.	G	GA	1611.33	PASS	AB=0.962;AC=10;AF=0.179;AN=56;BaseQRankSum=-8.517;DP=511;FS=4.855;HRun=9;HaplotypeScore=57.3601;InbreedingCoeff=0.6991;MQ=72.58;MQ0=1;MQRankSum=-0.690;QD=15.95;ReadPosRankSum=-3.340;VQSLOD=3.0243;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:71.43:0,71,577	0/0:3,0:3:6:0,6,52	0/0:23,1:18:19.71:0,20,204	0/0:32,0:20:20.79:0,21,170	0/0:15,0:15:26.87:0,27,216	0/1:11,1:12:3:3,0,204	0/0:17,0:17:41.95:0,42,360	1/1:9,23:32:66.06:678,66,0	0/0:19,0:19:47.97:0,48,413	0/0:18,0:18:38.98:0,39,337	0/1:5,0:5:16.96:17,0,41	0/0:17,0:17:47.99:0,48,417	0/0:14,0:14:38.96:0,39,335	0/0:24,0:24:59.95:0,60,515	0/0:21,0:21:41.95:0,42,361	0/0:22,0:22:56.99:0,57,495	0/0:31,0:31:68.91:0,69,588	0/0:28,0:27:65.96:0,66,573	1/1:5,15:20:39.07:412,39,0	1/1:1,5:8:14.79:132,15,0	1/1:2,22:24:48.13:531,48,0	0/0:15,0:15:35.97:0,36,312	0/0:7,0:7:17.92:0,18,147	0/0:25,1:26:32.78:0,33,510	0/0:6,0:6:0.90:0,1,90	0/0:22,0:22:59.97:0,60,519	0/0:12,0:12:32.01:0,32,266	0/0:4,0:4:6:0,6,52
chr10	10264462	.	A	AAC	245.23	PASS	AB=0.931;AC=17;AF=0.386;AN=44;BaseQRankSum=-2.764;DP=479;FS=1.773;HRun=0;HaplotypeScore=77.4629;InbreedingCoeff=0.2400;MQ=70.27;MQ0=21;MQRankSum=0.461;QD=1.66;ReadPosRankSum=-0.319;VQSLOD=1.3902;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:34:3.22:0,3,9	1/1:3,1:4:3.01:44,3,0	./.	./.	0/0:5,0:6:3.31:0,3,15	0/0:12,0:15:5.68:0,6,28	./.	1/1:23,0:22:0.89:2,1,0	0/0:9,0:12:5.45:0,5,15	0/0:11,0:10:2.50:0,2,25	0/0:6,0:6:2.92:0,3,25	0/0:11,0:16:5.68:0,6,28	./.	./.	0/1:16,0:15:7.68:8,0,18	0/1:17,6:22:13.69:38,0,14	1/1:19,0:19:3.01:42,3,0	1/1:15,9:23:6.49:89,6,0	0/0:27,0:25:2.97:0,3,32	0/0:6,0:6:2.96:0,3,31	0/0:29,0:24:2.88:0,3,25	1/1:4,0:7:2.94:42,3,0	./.	0/0:24,0:26:0.47:0,0,1	0/0:8,0:7:2.04:0,2,6	1/1:12,0:9:0.89:2,1,0	0/1:11,0:11:3.97:12,0,4	1/1:2,6:7:6.02:87,6,0
chr10	10269480	.	TC	T	2427.45	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=10.006;DP=762;FS=0.470;HRun=2;HaplotypeScore=69.9479;InbreedingCoeff=1.0000;MQ=62.68;MQ0=2;MQRankSum=-0.116;QD=33.71;ReadPosRankSum=1.332;VQSLOD=3.8885;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:93.29:0,93,1353	0/0:18,0:18:54.16:0,54,784	0/0:24,0:18:54.16:0,54,729	0/0:21,0:18:51.17:0,51,729	0/0:32,0:32:96.29:0,96,1400	1/1:0,22:22:63.20:818,63,0	1/1:0,18:18:48.16:623,48,0	0/0:35,0:35:99:0,105,1479	1/1:2,30:32:87.28:1129,87,0	0/0:35,0:35:99:0,99,1465	0/0:30,0:30:87.29:0,87,1285	0/0:26,0:26:78.26:0,78,1148	0/0:24,0:24:72.22:0,72,1036	0/0:24,0:24:72.24:0,72,1079	0/0:30,0:30:90.28:0,90,1307	0/0:38,0:38:99:0,114,1689	0/0:26,0:26:75.25:0,75,1122	0/0:21,0:21:63.19:0,63,904	0/0:24,0:24:63.17:0,63,919	0/0:26,0:26:78.25:0,78,1146	0/0:35,0:35:96.33:0,96,1434	0/0:24,0:24:69.23:0,69,1033	0/0:22,0:22:63.20:0,63,922	0/0:23,0:23:69.23:0,69,1034	0/0:27,0:27:81.25:0,81,1175	0/0:34,0:34:99:0,102,1502	0/0:31,0:31:87.28:0,87,1282	0/0:28,0:28:84.27:0,84,1231
chr10	10271319	.	A	ACC	10232.69	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-3.373;DP=510;FS=3.178;HRun=7;HaplotypeScore=78.4924;InbreedingCoeff=0.9804;MQ=70.60;MQ0=0;MQRankSum=-6.600;QD=21.32;ReadPosRankSum=3.549;VQSLOD=3.0767;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,24:33:53.66:805,54,0	1/1:0,0:9:20.07:75,20,0	0/0:12,0:10:18.04:0,18,204	0/0:17,0:17:38.33:0,38,382	1/1:6,9:17:30.10:472,30,0	1/1:1,0:15:36.07:367,36,0	1/1:6,0:30:54.10:547,54,0	1/1:9,16:25:36.09:540,36,0	1/1:3,0:17:42.08:430,42,0	1/1:4,0:28:61.56:221,62,0	1/1:0,0:7:14.97:53,15,0	1/1:1,18:19:45.15:738,45,0	1/1:1,12:15:33.11:540,33,0	1/1:2,14:16:33.11:542,33,0	1/1:2,0:18:34.93:123,35,0	1/1:2,0:14:29.94:106,30,0	1/1:0,0:27:49.91:176,50,0	1/1:1,0:19:42.42:150,42,0	1/1:4,10:14:30.10:492,30,0	1/1:10,11:21:30.10:451,30,0	1/1:1,16:18:36.12:591,36,0	1/1:0,17:17:42.14:688,42,0	1/1:4,11:15:24.08:392,24,0	1/1:3,22:27:51.17:837,51,0	1/1:3,12:15:36.08:560,36,0	1/1:3,0:17:36.22:152,36,0	1/1:2,0:12:22.46:79,22,0	1/1:3,0:15:29.82:105,30,0
chr10	10275717	.	A	AT	11763.47	PASS	AB=0.727;AC=45;AF=0.804;AN=56;BaseQRankSum=-8.690;DP=571;FS=0.952;HRun=9;HaplotypeScore=57.5240;InbreedingCoeff=0.8804;MQ=73.27;MQ0=0;MQRankSum=-2.062;QD=24.41;ReadPosRankSum=1.926;VQSLOD=5.6586;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,35:40:58.17:870,58,0	1/1:1,8:9:21.06:232,21,0	0/0:15,0:12:17.40:0,17,172	0/0:14,0:14:17.01:0,17,133	1/1:7,15:22:54.11:583,54,0	0/0:27,0:27:65.96:0,66,573	0/0:15,0:15:38.98:0,39,338	1/1:9,19:28:54.13:588,54,0	0/0:18,0:18:53.97:0,54,465	1/1:3,24:27:66.15:718,66,0	1/1:4,12:16:33.09:365,33,0	1/1:1,14:15:36.10:395,36,0	1/1:3,26:29:69.19:763,69,0	1/1:2,10:12:27.96:300,28,0	1/1:2,26:28:66.18:730,66,0	1/1:3,16:19:45.12:498,45,0	1/1:5,24:29:60.16:664,60,0	1/1:0,13:14:38.94:412,39,0	1/1:0,11:11:33.09:365,33,0	1/1:3,17:21:50.97:540,51,0	1/1:1,13:14:30.08:332,30,0	1/1:4,13:17:36.10:398,36,0	1/1:2,10:12:33.08:358,33,0	0/1:10,6:16:90.72:91,0,218	1/1:4,26:30:75.20:828,75,0	1/1:7,16:23:22.22:452,22,0	1/1:2,24:26:60.13:651,60,0	1/1:2,22:24:57.15:631,57,0
chr10	10275858	.	C	CAGTCA	38387.10	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-8.770;DP=578;FS=3.760;HRun=0;HaplotypeScore=107.4984;InbreedingCoeff=0.9129;MQ=83.11;MQ0=0;MQRankSum=-10.319;QD=72.29;ReadPosRankSum=6.137;VQSLOD=5.8296;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,30:36:78.74:2576,79,0	1/1:0,7:7:15.05:499,15,0	0/0:18,0:18:50.99:0,51,1107	0/0:29,0:29:76.53:0,77,1569	1/1:2,16:21:17.90:599,18,0	1/1:2,20:26:63.22:2072,63,0	1/1:3,18:24:48.16:1591,48,0	1/1:2,18:23:69.22:2046,69,0	1/1:3,12:15:42.14:1381,42,0	1/1:3,18:22:66.19:1982,66,0	1/1:1,4:5:6.02:198,6,0	1/1:2,14:16:42.14:1380,42,0	1/1:2,20:25:57.19:1893,57,0	1/1:4,13:19:48.16:1435,48,0	1/1:1,17:20:42.14:1397,42,0	1/1:1,16:20:48.13:1594,48,0	1/1:3,30:37:84.29:2796,84,0	1/1:1,20:23:63.22:2070,63,0	1/1:0,13:15:45.15:1391,45,0	1/1:1,11:13:24.08:764,24,0	1/1:5,31:41:65.36:2180,65,0	1/1:1,10:11:21.07:676,21,0	1/1:1,11:16:14.88:496,15,0	1/1:1,26:30:60.21:1997,60,0	1/1:2,16:19:30.10:998,30,0	1/1:2,19:22:66.23:2086,66,0	1/1:1,17:21:57.20:1890,57,0	1/1:0,3:4:12.04:399,12,0
chr10	10276092	.	T	TG	4940.27	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-4.371;DP=677;FS=16.286;HRun=6;HaplotypeScore=89.9981;InbreedingCoeff=0.9999;MQ=86.40;MQ0=0;MQRankSum=-2.209;QD=30.68;ReadPosRankSum=2.383;VQSLOD=3.5002;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,29:30:78.25:981,78,0	0/0:15,0:15:42.09:0,42,428	0/0:24,0:24:68.94:0,69,666	0/0:26,0:26:48.42:0,48,597	0/0:19,0:19:47.75:0,48,424	0/0:34,0:34:93.19:0,93,941	0/0:32,0:32:81.18:0,81,826	0/0:33,0:33:90.19:0,90,908	0/0:27,0:27:78.16:0,78,788	0/0:26,0:26:69.12:0,69,680	0/0:15,0:15:45.02:0,45,445	1/1:1,19:20:48.15:604,48,0	1/1:1,23:24:60.19:752,60,0	1/1:2,25:27:63.20:793,63,0	0/0:25,0:25:69.15:0,69,704	0/0:21,0:21:54.11:0,54,551	0/0:43,0:43:99:0,126,1259	0/0:22,0:22:66.15:0,66,673	0/0:25,0:25:63.12:0,63,634	0/0:20,0:21:48.99:0,49,491	0/0:34,0:34:93.19:0,93,941	1/1:4,13:17:39.12:491,39,0	1/1:0,15:15:33.11:415,33,0	1/1:2,26:28:72.23:906,72,0	0/0:20,0:20:57.13:0,57,581	0/0:21,0:21:60.14:0,60,612	0/0:20,0:20:54.12:0,54,551	0/0:13,0:13:39.09:0,39,398
chr10	10276887	.	TTTTA	T	2984.82	PASS	AB=1.000;AC=27;AF=0.482;AN=56;BaseQRankSum=0.399;DP=633;FS=16.689;HRun=0;HaplotypeScore=179.8924;InbreedingCoeff=0.5112;MQ=74.76;MQ0=1;MQRankSum=-1.487;QD=7.75;ReadPosRankSum=4.479;VQSLOD=1.6155;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:20.07:0,20,168	1/1:6,0:6:14.33:74,14,0	0/0:31,0:20:21.83:0,22,544	0/0:22,0:17:32.32:0,32,625	0/0:25,0:25:25.46:0,25,707	0/0:16,0:16:12.20:0,12,550	0/0:23,0:23:35.50:0,35,791	0/1:26,0:26:34.01:34,0,654	0/1:17,0:17:1.01:1,0,557	1/1:21,1:22:27.32:325,27,0	1/1:27,0:27:57.59:323,58,0	0/0:18,0:18:19.39:0,19,100	0/0:12,0:12:0.49:0,0,74	0/0:18,0:18:11.31:0,11,128	1/1:20,1:21:40.17:245,40,0	1/1:15,0:15:13.54:83,14,0	1/1:36,3:39:82.05:540,82,0	1/1:21,2:23:39.18:380,39,0	0/0:25,0:25:14.41:0,14,501	0/1:29,0:29:6.68:7,0,746	0/0:11,0:11:20.27:0,20,213	0/1:20,0:20:42.76:77,0,43	0/1:28,0:28:12.92:13,0,110	0/1:19,0:19:45.96:46,0,185	0/1:17,0:17:4.48:4,0,401	1/1:23,1:24:23.09:294,23,0	1/1:20,4:23:35.67:408,36,0	1/1:28,0:28:63.25:331,63,0
chr10	10276888	.	TTTA	T	8294.97	PASS	AB=0.982;AC=38;AF=0.679;AN=56;BaseQRankSum=-1.212;DP=611;FS=41.058;HRun=0;HaplotypeScore=148.2124;InbreedingCoeff=0.3438;MQ=76.84;MQ0=1;MQRankSum=-2.622;QD=16.36;ReadPosRankSum=7.486;VQSLOD=2.7668;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:45,2:47:14.32:228,14,0	1/1:0,6:6:15.04:227,15,0	0/0:31,0:20:37.42:0,37,478	0/0:23,0:18:28.34:0,28,460	0/1:22,1:23:57.82:58,0,378	0/0:16,0:16:11.23:0,11,355	0/0:23,0:23:32.06:0,32,502	0/1:25,0:25:78.60:79,0,349	0/1:17,0:17:1.56:2,0,343	1/1:1,19:20:60.05:719,60,0	1/1:1,23:24:65.25:764,65,0	1/1:18,0:18:15.62:56,16,0	1/1:11,1:12:10.87:74,11,0	0/1:18,1:19:25.05:89,0,25	1/1:1,18:19:42.14:618,42,0	1/1:1,14:15:23.96:300,24,0	1/1:3,34:37:87.18:1216,87,0	1/1:11,11:22:62.51:749,63,0	0/1:24,0:24:31.48:31,0,197	0/1:29,0:29:40.08:40,0,383	0/0:11,0:11:9.02:0,9,103	1/1:17,2:19:34.01:258,34,0	1/1:27,1:28:5.65:154,6,0	0/1:18,1:19:58.83:187,0,59	0/1:17,0:17:31.39:31,0,190	1/1:1,15:17:51.04:623,51,0	1/1:5,17:22:55.89:793,56,0	1/1:0,28:28:66.22:1001,66,0
chr10	10276889	.	TTA	T	7778.47	PASS	AB=0.931;AC=42;AF=0.750;AN=56;BaseQRankSum=4.891;DP=595;FS=59.781;HRun=0;HaplotypeScore=138.6379;InbreedingCoeff=0.0921;MQ=77.47;MQ0=1;MQRankSum=-2.321;QD=14.38;ReadPosRankSum=9.273;VQSLOD=1.8735;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,42:45:42.34:757,42,0	1/1:6,0:6:14.95:117,15,0	0/0:31,0:20:35.44:0,35,389	0/0:23,0:18:28.21:0,28,338	0/1:21,0:21:78.18:78,0,152	0/1:17,0:17:17.69:18,0,141	0/1:22,0:22:4.45:4,0,183	0/1:24,1:25:99:204,0,117	0/1:18,0:18:36.01:36,0,119	1/1:20,0:20:58.63:439,59,0	1/1:23,1:24:65.40:487,65,0	1/1:0,15:15:18.06:231,18,0	1/1:1,8:9:12.80:140,13,0	1/1:3,15:18:17.39:324,17,0	1/1:19,0:19:41.87:327,42,0	1/1:14,1:15:24.37:198,24,0	1/1:37,0:37:84.21:656,84,0	1/1:20,0:20:58.07:450,58,0	0/1:22,2:24:18.39:275,0,18	0/1:29,0:29:89.90:147,0,90	0/1:9,2:11:15.31:46,0,15	1/1:4,15:19:52.13:476,52,0	1/1:2,25:27:44.52:477,45,0	0/1:10,8:18:6.36:388,0,6	0/1:14,2:16:50.47:159,0,50	1/1:17,0:17:48.74:379,49,0	1/1:21,0:20:56.48:443,56,0	1/1:28,0:28:65.84:520,66,0
chr10	10276890	.	TA	T	7600.78	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=0.281;DP=580;FS=31.397;HRun=3;HaplotypeScore=131.0997;InbreedingCoeff=0.9427;MQ=78.87;MQ0=1;MQRankSum=-4.423;QD=14.40;ReadPosRankSum=4.887;VQSLOD=2.8115;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:45,0:45:61.78:380,62,0	1/1:6,0:6:14.68:88,15,0	0/0:30,0:21:33.47:0,33,277	0/0:21,0:18:28.09:0,28,265	1/1:15,6:21:29.86:306,30,0	1/1:15,1:17:14.88:135,15,0	1/1:13,4:17:23.86:184,24,0	1/1:17,7:24:50.64:489,51,0	1/1:13,0:15:25.37:167,25,0	1/1:20,0:20:53.01:352,53,0	1/1:24,0:24:64.54:384,65,0	1/1:15,0:15:17.65:107,18,0	1/1:9,0:9:11.61:72,12,0	1/1:17,1:18:29.11:196,29,0	1/1:19,0:19:41.07:245,41,0	1/1:15,0:15:23.50:142,24,0	1/1:37,0:37:82.26:496,82,0	1/1:20,0:20:59.10:390,59,0	1/1:16,8:24:62.86:590,63,0	1/1:17,10:27:49.62:529,50,0	1/1:3,7:10:11.85:122,12,0	1/1:17,2:19:53.05:356,53,0	1/1:27,0:27:41.11:250,41,0	1/1:18,0:18:40.58:288,41,0	1/1:10,5:15:33.14:298,33,0	1/1:17,0:17:47.21:312,47,0	1/1:21,0:20:55.72:332,56,0	1/1:28,0:28:64.71:390,65,0
chr10	10278216	.	GT	G	815.88	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-0.002;DP=543;FS=5.498;HRun=10;HaplotypeScore=77.1341;InbreedingCoeff=0.9053;MQ=75.67;MQ0=4;MQRankSum=0.480;QD=15.11;ReadPosRankSum=-0.260;VQSLOD=3.8829;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:41,1:45:83.74:0,84,1065	0/0:1,0:5:11.43:0,11,58	0/0:20,0:14:18.64:0,19,194	0/0:20,1:20:26.96:0,27,240	0/0:20,0:20:26.62:0,27,473	1/1:5,17:22:17.80:383,18,0	1/1:2,15:17:44.99:391,45,0	0/0:24,2:26:11.08:0,11,572	1/1:5,10:15:20.98:182,21,0	0/0:3,0:13:34.77:0,35,195	0/0:4,0:12:25.87:0,26,135	0/0:16,0:16:16.07:0,16,397	0/0:19,1:20:28.15:0,28,535	0/0:17,0:17:47.99:0,48,493	0/0:3,0:17:37.46:0,37,198	0/0:2,0:15:37.39:0,37,198	0/0:7,0:26:54.65:0,55,293	0/0:3,0:23:40.06:0,40,210	0/0:24,0:24:69.17:0,69,750	0/0:13,0:13:3.07:0,3,283	0/0:15,0:15:42.11:0,42,464	0/0:20,0:20:51.09:0,51,539	0/0:17,0:17:42.11:0,42,464	0/0:17,0:17:48.11:0,48,521	0/0:18,0:18:48.10:0,48,519	0/0:2,0:19:45.92:0,46,241	0/0:3,0:34:68.31:0,68,345	0/0:3,0:13:25.74:0,26,130
chr10	10278629	.	CACACACACACT	C	3509.59	PASS	AB=0.770;AC=9;AF=0.161;AN=56;BaseQRankSum=10.750;DP=515;FS=12.529;HRun=0;HaplotypeScore=189.3326;InbreedingCoeff=-0.1969;MQ=58.52;MQ0=21;MQRankSum=-9.019;QD=26.79;ReadPosRankSum=2.936;VQSLOD=2.3038;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:17,10:27:26.76:1154,0,27	0/0:6,0:5:14.65:0,15,213	0/0:26,0:12:20.65:0,21,504	0/0:44,0:21:56.83:0,57,958	0/1:6,1:7:47.90:62,0,48	0/0:14,0:12:12.58:0,13,503	0/0:25,0:25:65.24:0,65,1433	0/0:18,0:17:46.77:0,47,529	0/0:13,0:13:35.56:0,36,645	0/0:15,0:15:44.36:0,44,988	0/0:6,0:6:14.84:0,15,408	0/1:7,5:11:54.82:357,0,55	0/1:8,3:11:71.30:286,0,71	0/1:10,4:14:89.22:373,0,89	0/0:14,0:14:32.97:0,33,698	0/0:20,0:20:56.48:0,56,1491	0/0:41,0:41:99:0,119,3582	0/0:36,0:36:99:0,103,2729	0/0:19,0:18:48.21:0,48,797	0/0:10,0:10:26.75:0,27,616	0/0:45,0:44:92.20:0,92,1621	0/1:11,3:13:55.60:258,0,56	0/1:6,4:10:28.67:368,0,29	0/1:14,7:21:99:299,0,128	0/1:10,3:13:55.82:353,0,56	0/0:14,0:12:35.50:0,35,488	0/0:14,0:14:30.94:0,31,691	0/0:4,0:3:8.97:0,9,159
chr10	10279044	.	A	AGAGG	4889.02	PASS	AB=0.600;AC=17;AF=0.304;AN=56;BaseQRankSum=-9.582;DP=577;FS=0.498;HRun=0;HaplotypeScore=92.7291;InbreedingCoeff=0.9046;MQ=67.31;MQ0=10;MQRankSum=-1.781;QD=33.72;ReadPosRankSum=3.680;VQSLOD=4.5101;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,16:28:33.11:811,33,0	0/0:7,0:7:12.04:0,12,203	0/0:43,0:19:10.60:0,11,241	0/0:54,0:22:16.05:0,16,271	1/1:5,9:15:21.07:523,21,0	0/0:15,0:15:33.11:0,33,557	0/0:37,0:37:96.13:0,96,1380	0/0:17,0:17:24.08:0,24,405	0/0:39,0:39:92.90:0,93,1496	0/0:23,0:23:36.10:0,36,561	0/0:10,0:10:18.06:0,18,304	1/1:11,17:28:51.18:1260,51,0	1/1:7,7:14:15.05:371,15,0	1/1:4,10:14:27.09:671,27,0	0/0:17,0:17:45.15:0,45,746	0/0:25,0:25:66.18:0,66,1033	0/0:21,0:21:48.15:0,48,761	0/0:27,0:27:66.23:0,66,1114	0/0:13,0:13:15.05:0,15,253	0/0:11,0:11:24.07:0,24,380	0/0:32,0:32:75.15:0,75,1102	1/1:5,7:12:12.51:299,13,0	1/1:3,7:10:14.67:373,15,0	1/1:4,10:15:12.04:298,12,0	0/1:3,5:9:4.37:283,0,4	0/0:11,0:11:24.07:0,24,379	0/0:17,0:17:39.10:0,39,591	0/0:11,0:11:27.09:0,27,456
chr10	10279691	.	TG	T	2264.41	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=2.677;DP=611;FS=13.199;HRun=2;HaplotypeScore=72.2485;InbreedingCoeff=0.8359;MQ=70.38;MQ0=0;MQRankSum=-2.771;QD=28.31;ReadPosRankSum=-0.456;VQSLOD=1.9373;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:81.20:0,81,1165	0/0:8,0:8:24.05:0,24,319	0/1:13,0:13:37.53:38,0,271	0/0:15,0:15:36.01:0,36,454	0/0:16,0:16:48.16:0,48,718	1/1:0,18:18:48.16:623,48,0	1/1:1,21:22:57.19:740,57,0	0/0:25,0:25:66.22:0,66,972	1/1:0,27:27:78.25:1013,78,0	0/0:25,0:25:75.25:0,75,1122	0/0:16,0:16:48.15:0,48,698	0/0:26,0:26:78.25:0,78,1147	0/0:22,0:22:66.22:0,66,988	0/0:20,0:20:60.20:0,60,892	0/0:35,0:35:99:0,105,1572	0/0:23,0:23:66.22:0,66,987	0/0:33,0:33:99:0,99,1423	0/0:30,0:30:90.28:0,90,1325	0/0:18,0:18:45.13:0,45,652	0/0:12,0:12:36.12:0,36,537	0/0:41,0:41:99:0,114,1666	0/0:22,0:22:63.21:0,63,944	0/0:13,0:13:39.13:0,39,585	0/0:27,0:27:75.25:0,75,1124	0/0:17,0:17:28.27:0,28,678	0/0:28,0:28:84.28:0,84,1259	0/0:19,0:19:57.19:0,57,854	0/0:13,0:13:39.13:0,39,584
chr10	10282162	.	TAGATAGATAGATAGATAGATAG	T	1565.56	PASS	AB=1.000;AC=14;AF=0.250;AN=56;BaseQRankSum=-3.028;DP=598;FS=13.562;HRun=0;HaplotypeScore=371.5126;InbreedingCoeff=0.2671;MQ=50.55;MQ0=14;MQRankSum=-2.544;QD=7.21;ReadPosRankSum=-6.993;VQSLOD=0.1185;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:29:21.23:21,0,714	0/0:12,0:12:7.49:0,7,286	0/0:13,0:4:12.04:0,12,174	0/0:19,0:7:16.08:0,16,176	0/0:34,0:34:52.52:0,53,2044	0/1:28,0:27:61.40:61,0,278	0/1:13,0:12:33.70:34,0,97	1/1:23,0:20:20.66:278,21,0	0/0:21,0:20:9.64:0,10,256	0/0:36,0:36:59.13:0,59,2250	0/0:21,0:20:1.65:0,2,423	0/1:19,0:17:29.11:29,0,340	0/1:27,0:23:23.78:24,0,990	0/1:29,0:26:55.14:55,0,970	0/0:18,0:18:16.16:0,16,577	0/0:16,0:16:0.49:0,0,616	0/0:23,0:23:13.33:0,13,593	0/0:17,0:16:24.55:0,25,582	1/1:6,9:13:21.02:386,21,0	1/1:9,17:26:14.88:801,15,0	1/1:7,0:5:3.01:43,3,0	0/0:24,0:20:26.12:0,26,856	0/0:22,0:21:7.41:0,7,304	0/0:11,0:11:2.59:0,3,117	0/0:31,0:30:16.70:0,17,389	0/0:27,0:27:53.39:0,53,1603	0/0:22,0:22:34.08:0,34,764	0/0:13,0:13:19.70:0,20,448
chr10	10282168	.	GAT	G	182.25	PASS	AB=0.784;AC=6;AF=0.107;AN=56;BaseQRankSum=8.011;DP=577;FS=0.721;HRun=0;HaplotypeScore=243.4890;InbreedingCoeff=-0.1462;MQ=53.39;MQ0=8;MQRankSum=-7.636;QD=1.27;ReadPosRankSum=4.307;VQSLOD=2.0917;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:26,4:29:32:32,0,119	0/0:11,0:11:18.03:0,18,236	0/0:15,0:7:21.07:0,21,282	0/0:21,0:11:14.26:0,14,192	0/0:35,0:35:53.91:0,54,614	0/1:21,8:28:25.56:32,0,26	0/1:8,4:11:36.38:36,0,69	0/0:23,0:19:57.01:0,57,734	0/0:14,4:17:8.82:0,9,128	0/0:35,0:35:51.29:0,51,733	0/0:22,0:21:23.15:0,23,289	0/1:11,7:16:31.37:31,0,101	0/1:18,8:22:99:119,0,216	0/1:22,7:26:54.68:55,0,390	0/0:16,0:16:36.80:0,37,512	0/0:16,0:16:29.02:0,29,241	0/0:22,0:22:45.23:0,45,453	0/0:16,0:15:25.58:0,26,210	0/0:12,0:10:9.03:0,9,123	0/0:22,0:22:3.62:0,4,27	0/0:5,0:4:3.01:0,3,43	0/0:22,0:19:24.13:0,24,337	0/0:17,4:20:13.39:0,13,172	0/0:9,2:11:5.84:0,6,83	0/0:31,0:30:22.01:0,22,331	0/0:24,0:24:32.90:0,33,395	0/0:21,0:20:27.19:0,27,461	0/0:14,0:14:33.98:0,34,529
chr10	10282170	.	T	TAG	2245.03	PASS	AB=0.892;AC=17;AF=0.304;AN=56;BaseQRankSum=-0.099;DP=577;FS=7.306;HRun=0;HaplotypeScore=239.9482;InbreedingCoeff=-0.2969;MQ=53.22;MQ0=8;MQRankSum=0.291;QD=6.22;ReadPosRankSum=1.178;VQSLOD=2.1212;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:28,1:28:21.71:22,0,213	0/1:10,2:12:31.43:31,0,186	0/0:17,0:9:21.07:0,21,282	0/0:22,0:12:16.38:0,16,197	0/0:34,0:34:23.96:0,24,550	1/1:12,16:28:12.03:198,12,0	0/1:10,2:11:19.02:71,0,19	0/0:24,0:19:38.25:0,38,409	0/0:17,2:18:14.55:0,15,161	0/1:33,2:35:99:405,0,447	0/1:18,2:19:88.30:88,0,123	0/1:17,3:18:11.06:32,0,11	0/1:24,1:21:54.55:200,0,55	0/1:27,0:24:73.13:73,0,157	0/0:18,0:18:21.89:0,22,417	0/1:15,1:16:99:274,0,108	0/1:19,3:22:99:270,0,235	0/1:14,2:15:83.16:219,0,83	0/0:11,0:9:6.02:0,6,86	0/0:21,0:21:13.72:0,14,60	0/0:4,0:3:3.01:0,3,43	0/1:21,0:18:1.46:1,0,164	0/0:20,1:20:5.86:0,6,81	0/0:10,1:11:3.01:0,3,43	0/1:23,8:30:70.47:70,0,251	0/1:16,8:24:99:405,0,196	0/1:15,7:21:41.29:41,0,386	0/0:14,0:14:20.62:0,21,430
chr10	10282172	.	GAT	G	2140.68	PASS	AB=0.884;AC=19;AF=0.339;AN=56;BaseQRankSum=3.981;DP=580;FS=24.003;HRun=0;HaplotypeScore=241.9789;InbreedingCoeff=-0.5224;MQ=55.22;MQ0=9;MQRankSum=-1.079;QD=5.01;ReadPosRankSum=4.476;VQSLOD=1.2732;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:27:17.26:17,0,99	0/0:8,4:12:9.52:0,10,136	0/0:18,0:10:30.07:0,30,406	0/1:23,1:14:11.52:12,0,228	0/0:34,0:34:44.66:0,45,481	0/1:27,3:29:12.70:103,0,13	0/1:12,0:11:22.28:23,0,22	0/0:25,0:18:41.26:0,41,451	0/0:19,0:18:8.79:0,9,89	0/1:23,12:35:99:575,0,271	0/1:12,7:18:57.79:117,0,58	0/1:21,0:19:10.91:11,0,125	0/1:26,0:22:99:113,0,210	0/1:27,0:24:27.52:28,0,350	0/1:16,2:18:43.35:43,0,324	0/1:8,8:16:46.50:233,0,46	0/1:20,2:22:99:212,0,203	0/1:11,4:14:48.38:178,0,48	0/0:11,0:9:8.90:0,9,100	0/1:21,0:21:0.38:0,0,10	0/0:5,0:4:3.01:0,3,43	0/1:19,2:18:46.94:47,0,236	0/0:20,0:19:7.39:0,7,105	0/0:9,0:9:2.82:0,3,58	0/1:17,13:30:75.11:75,0,175	0/1:18,7:25:99:429,0,125	0/1:21,2:22:63.59:64,0,281	0/1:12,2:14:14.85:15,0,331
chr10	10282174	.	T	TAG	644.37	PASS	AB=0.944;AC=11;AF=0.196;AN=56;BaseQRankSum=-0.339;DP=577;FS=4.619;HRun=0;HaplotypeScore=253.2433;InbreedingCoeff=-0.0970;MQ=56.92;MQ0=9;MQRankSum=0.206;QD=2.66;ReadPosRankSum=-1.802;VQSLOD=2.2420;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:28,1:28:13.24:13,0,90	0/0:12,0:12:17.70:0,18,113	0/0:20,0:12:29.67:0,30,406	0/1:26,0:17:6.93:7,0,230	0/1:32,3:35:99:316,0,174	0/1:30,0:29:17.26:27,0,17	1/1:11,1:11:8.91:100,9,0	0/0:25,0:17:20.70:0,21,380	0/0:17,1:17:5.92:0,6,44	0/0:35,0:35:54.08:0,54,340	0/0:18,0:17:11.37:0,11,108	0/1:20,1:19:11.50:11,0,40	0/1:19,7:22:44.88:140,0,45	0/1:24,3:24:45.95:46,0,134	0/0:17,0:17:40.47:0,40,267	0/0:16,0:16:4.25:0,4,72	0/0:21,0:21:14.08:0,14,178	0/1:15,0:14:7.85:8,0,93	0/0:11,0:9:8.90:0,9,100	0/0:21,0:21:15.66:0,16,62	0/0:6,0:5:3.01:0,3,43	0/1:20,0:17:99:118,0,117	0/0:18,1:18:5.86:0,6,81	0/0:6,1:8:3.01:0,3,43	0/0:28,0:27:14.72:0,15,155	0/0:25,0:25:4.48:0,4,209	0/0:23,0:22:33.52:0,34,274	0/0:12,0:12:34.58:0,35,256
chr10	10282176	.	GAT	G	1032.23	PASS	AB=0.967;AC=18;AF=0.321;AN=56;BaseQRankSum=-0.286;DP=567;FS=2.757;HRun=0;HaplotypeScore=246.0349;InbreedingCoeff=0.0913;MQ=57.92;MQ0=10;MQRankSum=2.158;QD=3.58;ReadPosRankSum=6.054;VQSLOD=2.4114;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:27:11.66:0,12,102	1/1:12,1:13:0.64:22,1,0	0/0:21,0:13:33.11:0,33,470	0/0:30,0:18:23.34:0,23,342	0/1:25,10:35:3.24:376,0,3	0/0:30,0:29:12.19:0,12,93	1/1:11,1:11:3.75:66,4,0	0/0:19,0:11:29.51:0,30,250	0/0:18,0:17:2.55:0,3,34	0/1:34,1:35:74.17:262,0,74	0/1:17,0:16:2.74:25,0,3	0/0:21,0:19:11.39:0,11,146	0/0:25,0:21:12.71:0,13,218	0/0:26,0:23:26.17:0,26,345	1/1:17,0:17:15.03:80,15,0	0/1:15,0:15:12.42:12,0,46	0/1:19,0:19:14.97:15,0,65	0/0:15,0:14:7.71:0,8,56	0/0:11,0:9:8.93:0,9,76	0/1:17,0:17:1.82:2,0,7	0/0:5,0:4:2.98:0,3,21	0/1:20,0:17:70.96:71,0,166	0/0:19,0:18:7.38:0,7,93	0/0:10,0:10:5.69:0,6,69	0/1:28,0:27:10.19:28,0,10	0/1:25,0:25:92.74:138,0,93	0/1:21,2:22:29.85:54,0,30	1/1:12,0:12:3.15:39,3,0
chr10	10282178	.	TAGATAG	T	5453.33	PASS	AB=1.000;AC=45;AF=0.804;AN=56;BaseQRankSum=1.961;DP=572;FS=1.223;HRun=0;HaplotypeScore=257.5814;InbreedingCoeff=0.1813;MQ=58.06;MQ0=10;MQRankSum=-0.520;QD=10.55;ReadPosRankSum=4.671;VQSLOD=3.6880;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:28:61.46:69,0,61	1/1:9,4:13:14.57:137,15,0	0/0:23,0:15:44.74:0,45,632	0/0:32,0:19:19.25:0,19,516	0/1:36,0:36:27.68:202,0,28	1/1:30,0:29:15.65:202,16,0	1/1:12,0:11:2.28:42,2,0	1/1:19,0:11:33.11:471,33,0	0/1:18,0:17:0.73:1,0,2	1/1:23,11:34:19.67:1056,20,0	1/1:11,7:17:17.25:206,17,0	0/1:22,0:20:7.93:133,0,8	0/1:25,0:21:99:158,0,144	0/1:27,0:24:35.99:164,0,36	1/1:15,2:17:15.69:233,16,0	1/1:12,4:16:22.80:206,23,0	1/1:19,0:19:10.98:138,11,0	1/1:15,0:14:12.16:137,12,0	1/1:11,0:9:21.06:277,21,0	1/1:17,0:17:15:156,15,0	1/1:5,0:4:3.01:43,3,0	1/1:14,0:17:7.49:130,7,0	0/1:19,0:18:0.08:39,0,0	1/1:10,0:10:2.89:43,3,0	1/1:14,13:27:17.47:144,17,0	1/1:17,7:24:61.74:716,62,0	1/1:20,2:21:0.69:252,1,0	1/1:10,2:12:3.81:99,4,0
chr10	10282182	.	TAG	T	3876.61	PASS	AB=0.790;AC=46;AF=0.821;AN=56;BaseQRankSum=1.713;DP=558;FS=0.000;HRun=0;HaplotypeScore=239.8963;InbreedingCoeff=0.2729;MQ=59.02;MQ0=9;MQRankSum=-0.107;QD=8.03;ReadPosRankSum=4.236;VQSLOD=2.5073;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:16,10:27:10.42:72,0,10	1/1:12,1:13:15.02:84,15,0	0/0:24,0:16:37.70:0,38,622	0/0:34,0:21:37.31:0,37,559	1/1:26,8:34:30.87:298,31,0	1/1:3,26:29:17.01:203,17,0	1/1:2,8:9:2.65:42,3,0	1/1:1,20:13:39.10:521,39,0	0/0:10,7:16:0.14:0,0,1	1/1:32,1:33:17.78:526,18,0	1/1:18,0:17:13.48:66,13,0	1/1:9,14:21:10.38:163,10,0	0/1:15,10:21:40.96:204,0,41	0/1:17,8:22:15.51:167,0,16	1/1:17,0:17:13.79:98,14,0	1/1:17,0:17:20.48:130,20,0	1/1:16,1:17:9.75:88,10,0	1/1:12,0:11:7.41:47,7,0	1/1:11,0:9:21.06:277,21,0	1/1:17,0:17:5.51:25,6,0	1/1:1,4:4:3.01:43,3,0	1/1:16,2:15:10.82:193,11,0	1/1:7,13:19:0.18:39,0,0	1/1:4,6:10:2.91:43,3,0	1/1:26,0:25:16.59:54,17,0	1/1:22,0:22:53.84:345,54,0	0/1:19,1:19:1.67:105,0,2	1/1:12,0:12:2.05:44,2,0
chr10	10282184	.	G	GAT	3142.52	PASS	AB=0.954;AC=45;AF=0.804;AN=56;BaseQRankSum=1.045;DP=573;FS=3.679;HRun=0;HaplotypeScore=252.4584;InbreedingCoeff=0.4605;MQ=58.77;MQ0=7;MQRankSum=-0.204;QD=6.35;ReadPosRankSum=2.080;VQSLOD=3.3101;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:26,1:29:2.84:75,0,3	1/1:13,0:13:14.96:84,15,0	0/0:25,0:17:39.96:0,40,650	0/0:36,0:23:23.71:0,24,564	1/1:34,0:34:33.88:172,34,0	1/1:30,0:30:17.64:204,18,0	1/1:9,0:9:2.90:43,3,0	1/1:21,1:14:39.10:521,39,0	0/1:14,2:16:0.20:1,0,0	0/1:36,0:36:0.97:231,0,1	1/1:16,0:16:8.42:24,8,0	1/1:22,1:21:15.88:167,16,0	1/1:22,7:25:16.78:279,17,0	1/1:20,5:22:19.91:204,20,0	1/1:19,0:19:11.82:53,12,0	1/1:16,0:16:20.43:118,20,0	1/1:18,0:18:12.05:124,12,0	1/1:13,0:12:6.07:56,6,0	1/1:11,0:10:21.06:277,21,0	0/0:17,0:17:8.86:0,9,57	1/1:5,0:4:3.01:43,3,0	1/1:13,6:16:15.03:232,15,0	1/1:19,1:19:2.99:43,3,0	1/1:6,3:9:2.96:43,3,0	1/1:26,0:25:15.53:59,16,0	1/1:22,0:22:36.29:161,36,0	0/1:22,0:21:1.28:63,0,1	0/1:12,0:12:4.24:10,0,4
chr10	10282218	.	CACAA	C	453.35	PASS	AB=1.000;AC=10;AF=0.179;AN=56;BaseQRankSum=0.025;DP=617;FS=38.157;HRun=0;HaplotypeScore=236.4454;InbreedingCoeff=0.4388;MQ=51.02;MQ0=20;MQRankSum=-5.492;QD=2.61;ReadPosRankSum=-2.802;VQSLOD=1.0349;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:6.39:0,6,144	0/0:12,0:12:34.26:0,34,460	0/0:50,0:21:51.16:0,51,911	0/1:51,0:21:7.14:7,0,455	0/0:24,0:24:51.01:0,51,710	1/1:16,4:25:13.72:182,14,0	1/1:10,8:17:16.58:165,17,0	0/0:27,0:22:52.33:0,52,865	1/1:14,3:17:7.41:100,7,0	0/0:27,0:26:68.84:0,69,1277	0/0:15,0:15:32.77:0,33,384	0/1:24,0:24:24.45:24,0,68	0/1:16,0:16:13.56:14,0,144	0/1:22,0:22:99:113,0,173	0/0:22,0:22:42.45:0,42,954	0/0:21,0:21:44.12:0,44,704	0/0:17,0:17:34.80:0,35,718	0/0:17,0:17:36.11:0,36,731	0/0:17,0:17:42.49:0,42,553	0/0:22,0:22:28.95:0,29,226	0/0:22,0:21:31.58:0,32,247	0/0:19,0:19:5.14:0,5,273	0/0:15,0:15:15.98:0,16,69	0/0:14,0:13:4.73:0,5,151	0/0:23,0:23:51.99:0,52,568	0/0:24,0:23:47.93:0,48,1060	0/0:21,0:20:55.94:0,56,1057	0/0:14,0:14:37.37:0,37,742
chr10	10282220	.	CAAACAT	C	676.51	PASS	AB=1.000;AC=10;AF=0.179;AN=56;BaseQRankSum=0.290;DP=603;FS=8.189;HRun=0;HaplotypeScore=243.0346;InbreedingCoeff=0.4765;MQ=50.16;MQ0=19;MQRankSum=-6.920;QD=3.87;ReadPosRankSum=-3.733;VQSLOD=0.8180;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,1:18:5.50:0,5,242	0/0:12,0:12:33.84:0,34,517	0/0:48,0:19:46.97:0,47,908	0/1:48,0:18:57.15:57,0,452	0/1:23,0:23:20.25:20,0,578	1/1:21,1:23:14.26:270,14,0	1/1:17,0:17:22.82:255,23,0	0/0:26,0:23:54.84:0,55,881	1/1:10,7:17:7.38:168,7,0	0/0:26,0:25:66.64:0,67,1410	0/0:16,0:16:32.76:0,33,374	0/1:24,0:24:4.40:4,0,217	0/0:15,0:15:33.14:0,33,229	0/0:23,0:23:15.69:0,16,254	0/0:22,0:22:35.26:0,35,1057	0/0:21,0:21:43.87:0,44,837	0/0:16,0:17:38.82:0,39,840	0/0:17,0:17:36.10:0,36,812	0/0:18,0:18:14.99:0,15,497	0/1:21,0:21:55.67:56,0,153	0/0:22,0:21:16.71:0,17,217	0/0:19,0:19:34.82:0,35,416	0/0:15,0:15:18.63:0,19,126	0/0:13,0:12:17.02:0,17,214	0/0:23,0:23:46.28:0,46,515	0/0:23,0:22:59.38:0,59,1271	0/0:21,0:20:59.47:0,59,1203	0/0:13,0:13:37.37:0,37,891
chr10	10282222	.	AACAT	A	929.24	PASS	AB=0.970;AC=16;AF=0.286;AN=56;BaseQRankSum=3.278;DP=600;FS=24.420;HRun=0;HaplotypeScore=219.5809;InbreedingCoeff=0.3797;MQ=50.52;MQ0=20;MQRankSum=-6.432;QD=4.11;ReadPosRankSum=-3.998;VQSLOD=0.5755;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:17,0:17:20.02:52,0,20	0/0:11,0:12:23.04:0,23,288	0/0:47,0:18:50.90:0,51,477	0/1:46,0:16:3.76:4,0,215	0/0:24,0:24:1.85:0,2,240	1/1:22,0:22:14.93:109,15,0	1/1:18,0:17:16.60:98,17,0	0/0:24,0:22:44.66:0,45,413	1/1:17,0:17:8.12:81,8,0	0/0:27,0:26:62.61:0,63,743	0/0:16,0:16:17.79:0,18,190	1/1:22,0:22:14.26:186,14,0	0/1:14,1:15:15.05:107,0,15	0/1:19,3:22:24.05:219,0,24	0/0:22,0:22:40.79:0,41,578	0/0:22,0:22:38.62:0,39,373	0/0:18,0:18:29.95:0,30,457	0/0:18,0:18:33.06:0,33,554	0/0:19,0:19:0.67:0,1,224	0/0:21,0:21:6.78:0,7,65	0/0:23,0:21:11.52:0,12,83	0/1:19,0:19:77.03:133,0,77	1/1:15,0:15:5.97:45,6,0	0/1:13,0:12:50.64:70,0,51	0/0:20,0:21:31.53:0,32,237	0/0:25,0:25:38.89:0,39,765	0/0:21,0:20:35.24:0,35,687	0/0:13,0:13:29.02:0,29,513
chr10	10282226	.	TACAC	T	1854.40	PASS	AB=0.711;AC=27;AF=0.519;AN=52;BaseQRankSum=1.420;DP=599;FS=0.000;HRun=0;HaplotypeScore=204.0708;InbreedingCoeff=0.6440;MQ=51.30;MQ0=21;MQRankSum=-4.480;QD=6.53;ReadPosRankSum=-0.947;VQSLOD=2.3490;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:16,1:18:14.63:180,15,0	0/0:12,0:12:15.02:0,15,237	./.	./.	1/1:16,0:20:18.78:142,19,0	0/1:17,0:20:11.79:12,0,33	1/1:11,2:18:2.72:90,3,0	1/1:23,0:22:0.47:2,0,0	1/1:14,0:16:3.63:39,4,0	0/0:17,0:30:36.02:0,36,453	0/0:7,0:17:6.02:0,6,104	1/1:9,10:21:26.78:370,27,0	1/1:10,4:14:6.70:169,7,0	1/1:13,9:22:17.88:274,18,0	0/0:16,0:23:20.63:0,21,284	0/1:10,0:23:2.81:3,0,122	0/0:19,0:21:33.41:0,33,403	0/0:9,0:19:27.04:0,27,449	1/1:15,0:20:17.05:143,17,0	1/1:16,0:22:8.86:38,9,0	0/0:21,0:22:4.44:0,4,30	1/1:7,10:18:14.43:313,14,0	0/1:6,9:15:2.08:85,0,2	1/1:7,6:12:12.48:180,12,0	0/0:18,0:18:1.54:0,2,17	0/0:25,0:24:41.85:0,42,644	0/0:20,0:21:24.95:0,25,435	0/0:12,0:13:15.05:0,15,283
chr10	10283841	.	AAGCAGAGAGAGGT	A	9119.35	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=14.041;DP=622;FS=1.943;HRun=0;HaplotypeScore=230.1604;InbreedingCoeff=0.9777;MQ=85.55;MQ0=0;MQRankSum=-14.582;QD=50.66;ReadPosRankSum=3.758;VQSLOD=4.5449;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,25:33:54.18:1758,54,0	0/0:10,0:10:24.08:0,24,1401	0/0:28,0:26:48.15:0,48,2148	0/0:37,0:34:72.25:0,72,3427	1/1:2,8:10:18.02:438,18,0	0/0:25,0:25:51.15:0,51,2774	0/0:30,0:30:81.28:0,81,5036	0/0:30,0:30:72.19:0,72,4008	0/0:21,0:21:54.19:0,54,3313	0/0:17,0:17:45.15:0,45,2664	0/0:17,0:17:45.63:0,46,2452	1/1:7,17:24:48.16:1534,48,0	1/1:9,13:22:30.10:1072,30,0	1/1:4,8:12:24.08:688,24,0	0/0:29,0:29:87.30:0,87,5319	0/0:11,0:11:30.10:0,30,1555	0/0:28,0:28:72.25:0,72,4373	0/0:19,0:19:42.14:0,42,2534	0/0:26,0:26:69.23:0,69,3869	0/0:21,0:21:45.15:0,45,2839	0/0:40,0:40:99:0,105,6207	1/1:5,11:16:27.09:955,27,0	1/1:4,10:14:17.75:612,18,0	1/1:10,14:24:5.54:228,6,0	1/1:7,18:25:54.18:1833,54,0	0/0:29,0:29:78.27:0,78,4511	0/0:16,0:16:42.13:0,42,2497	0/0:8,0:8:21.07:0,21,1349
chr10	10285319	.	GC	G	6287.44	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-6.038;DP=534;FS=7.028;HRun=9;HaplotypeScore=76.2358;InbreedingCoeff=0.9905;MQ=75.52;MQ0=1;MQRankSum=-0.596;QD=23.73;ReadPosRankSum=6.411;VQSLOD=4.9762;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:26:51.46:0,51,274	1/1:0,7:7:21.01:192,21,0	0/0:17,1:16:25.60:0,26,252	0/0:12,0:11:16.62:0,17,175	0/0:3,0:18:42.99:0,43,236	1/1:2,23:25:60.03:549,60,0	1/1:3,19:22:48.02:439,48,0	0/0:28,0:29:60:0,60,664	1/1:0,23:23:63.03:577,63,0	1/1:0,18:18:54.03:494,54,0	1/1:1,18:19:48.02:439,48,0	0/0:4,0:20:42.73:0,43,221	0/0:3,0:15:28.56:0,29,153	0/0:5,0:22:48.43:0,48,254	1/1:1,20:21:54.02:494,54,0	1/1:4,26:30:75.04:686,75,0	1/1:1,28:29:72.03:658,72,0	1/1:0,13:14:38.06:335,38,0	0/0:9,0:10:17.10:0,17,227	0/0:22,0:22:45.12:0,45,509	0/0:28,1:29:50.76:0,51,836	0/0:2,0:9:17.04:0,17,87	0/0:4,0:13:17.04:0,17,86	0/0:1,0:9:14.20:0,14,72	0/0:4,0:16:37.12:0,37,199	1/1:2,19:21:56.97:517,57,0	1/1:1,26:27:75.04:686,75,0	1/1:0,9:9:24.01:220,24,0
chr10	10285481	.	CA	C	13931.28	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-4.909;DP=578;FS=1.927;HRun=8;HaplotypeScore=60.7753;InbreedingCoeff=0.9750;MQ=80.53;MQ0=0;MQRankSum=-7.343;QD=25.33;ReadPosRankSum=4.726;VQSLOD=5.4534;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,42:45:99:1101,114,0	1/1:0,9:9:27.04:261,27,0	0/0:17,0:17:23.15:0,23,274	0/0:10,0:11:17.46:0,17,182	1/1:1,15:16:45.07:435,45,0	1/1:2,27:29:75.12:724,75,0	1/1:6,20:27:65.14:614,65,0	1/1:3,26:29:78.12:753,78,0	1/1:0,21:21:57.09:550,57,0	1/1:3,7:10:21.02:197,21,0	1/1:0,18:18:51.08:492,51,0	1/1:3,23:26:66.10:637,66,0	1/1:0,18:18:48.08:463,48,0	1/1:3,19:22:45.07:434,45,0	1/1:2,17:19:51.08:492,51,0	1/1:1,24:25:72.11:695,72,0	1/1:1,22:23:60.10:579,60,0	1/1:0,24:24:69.11:666,69,0	1/1:2,19:21:54.08:520,54,0	1/1:2,26:28:78.12:753,78,0	1/1:0,27:27:81.13:782,81,0	1/1:0,14:14:39.06:377,39,0	1/1:0,13:13:36.06:348,36,0	1/1:0,17:17:48.08:464,48,0	1/1:1,11:12:27.04:261,27,0	1/1:2,17:19:51.08:493,51,0	1/1:2,29:31:75.12:724,75,0	1/1:2,5:7:12.02:116,12,0
chr10	10287691	.	C	CT	1170.75	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-6.791;DP=386;FS=1.375;HRun=9;HaplotypeScore=39.0697;InbreedingCoeff=0.9030;MQ=60.51;MQ0=2;MQRankSum=-0.072;QD=18.58;ReadPosRankSum=-2.396;VQSLOD=2.6186;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:62.97:0,63,543	0/0:4,0:4:8.99:0,9,78	0/0:2,0:2:3:0,3,25	0/0:5,0:5:6.97:0,7,35	0/0:15,0:15:35.98:0,36,312	0/0:21,0:21:62.91:0,63,537	0/0:11,0:11:25.96:0,26,205	1/1:3,24:20:48.09:517,48,0	0/0:7,0:7:20.79:0,21,169	0/0:21,0:22:62.02:0,62,527	0/0:13,0:13:32.99:0,33,286	0/0:8,0:8:23.98:0,24,205	0/0:12,0:12:26.98:0,27,234	0/0:18,0:18:44.98:0,45,391	0/0:18,0:18:47.99:0,48,416	0/0:15,0:15:44.99:0,45,391	0/0:10,0:10:29.88:0,30,246	0/0:7,0:7:17.99:0,18,156	1/1:3,9:12:27.07:299,27,0	1/1:3,13:15:17.06:346,17,0	1/1:1,7:8:15.04:166,15,0	0/0:13,0:13:35.98:0,36,309	0/0:12,0:12:26.98:0,27,234	0/0:10,0:10:23.98:0,24,205	0/0:19,0:19:50.99:0,51,442	0/0:21,0:22:62.02:0,62,527	0/0:22,0:22:56.98:0,57,495	0/0:13,0:12:26.68:0,27,228
chr10	10287812	.	CT	C	1282.18	PASS	AB=0.909;AC=35;AF=0.795;AN=44;BaseQRankSum=-2.718;DP=393;FS=13.010;HRun=11;HaplotypeScore=21.0734;InbreedingCoeff=0.3099;MQ=17.95;MQ0=195;MQRankSum=-1.751;QD=4.61;ReadPosRankSum=2.518;VQSLOD=-0.0820;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:3:0:0,0,0	1/1:2,4:5:8.99:74,9,0	0/0:5,0:1:3.01:0,3,32	./.	1/1:4,12:8:17.02:129,17,0	1/1:12,11:11:23.97:197,24,0	1/1:8,4:3:3:25,3,0	1/1:26,8:2:3:25,3,0	1/1:2,7:4:8.99:74,9,0	1/1:4,11:9:14.90:111,15,0	1/1:3,9:10:11.99:98,12,0	./.	0/0:15,0:3:0:0,0,0	./.	1/1:9,7:3:5.99:49,6,0	1/1:2,8:4:8.99:74,9,0	./.	1/1:14,4:1:3:25,3,0	0/1:18,2:7:11.61:40,0,12	1/1:4,6:4:11.99:98,12,0	1/1:3,3:1:3:25,3,0	./.	0/0:7,0:4:3.01:0,3,32	./.	1/1:5,7:4:5.99:49,6,0	1/1:10,8:7:11.97:98,12,0	1/1:8,17:9:20.98:173,21,0	1/1:8,5:3:3:25,3,0
chr10	10292996	.	C	CTT	5520.62	PASS	AB=0.884;AC=43;AF=0.768;AN=56;BaseQRankSum=-6.091;DP=421;FS=10.566;HRun=9;HaplotypeScore=64.8143;InbreedingCoeff=0.6155;MQ=68.96;MQ0=21;MQRankSum=0.016;QD=17.20;ReadPosRankSum=4.433;VQSLOD=1.9651;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,0:28:31.12:137,31,0	1/1:2,1:3:6.02:91,6,0	0/0:62,0:14:15.89:0,16,137	0/1:66,0:20:4.39:4,0,168	0/1:5,0:18:18.75:19,0,19	0/0:9,0:10:14.99:0,15,206	0/0:10,0:10:27.07:0,27,287	1/1:8,19:26:31.35:820,31,0	0/0:7,0:7:21.05:0,21,219	1/1:6,4:10:15.05:231,15,0	1/1:5,2:7:15:182,15,0	1/1:3,0:5:4.99:17,5,0	1/1:1,0:4:7.49:26,7,0	0/0:0,0:10:2.68:0,3,11	1/1:3,2:5:12.03:164,12,0	1/1:3,5:8:21.06:304,21,0	1/1:7,15:23:56.63:779,57,0	0/1:8,7:14:4.83:335,0,5	1/1:1,7:8:21.07:322,21,0	1/1:3,10:14:26.34:323,26,0	1/1:2,7:10:15.04:213,15,0	1/1:1,0:6:12.20:41,12,0	1/1:1,0:10:0.89:3,1,0	1/1:3,0:7:12.35:43,12,0	1/1:2,0:10:19.84:68,20,0	1/1:4,8:13:35.60:492,36,0	1/1:2,9:11:33.09:483,33,0	1/1:4,7:11:29.69:425,30,0
chr10	10293012	.	G	GT	1455.61	PASS	AB=0.910;AC=20;AF=0.357;AN=56;BaseQRankSum=-5.005;DP=467;FS=12.036;HRun=9;HaplotypeScore=102.2195;InbreedingCoeff=0.2597;MQ=52.73;MQ0=32;MQRankSum=-0.110;QD=5.97;ReadPosRankSum=5.035;VQSLOD=0.3361;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:60.99:0,61,463	0/1:6,1:7:8.73:27,0,9	0/1:85,0:8:13.70:14,0,29	0/0:94,0:17:19.48:0,19,116	0/0:14,0:14:8.99:0,9,77	1/1:8,0:8:20.99:189,21,0	1/1:12,0:12:29.06:217,29,0	0/0:19,0:18:41.70:0,42,346	1/1:7,0:7:15.88:148,16,0	0/1:7,0:7:33.92:52,0,34	0/1:5,1:6:1.49:26,0,1	0/0:3,0:3:5.83:0,6,38	0/0:4,0:4:8.95:0,9,66	0/0:10,0:10:2.22:0,2,7	1/1:4,1:5:5.69:43,6,0	1/1:5,3:8:4.52:163,5,0	0/1:22,5:27:32.81:285,0,33	0/1:15,2:16:1.97:127,0,2	0/0:9,0:9:20.96:0,21,174	0/0:8,0:8:11.87:0,12,93	0/0:7,0:6:11.98:0,12,101	0/0:5,0:5:9.46:0,9,78	0/1:9,0:9:0:0,0,0	0/0:7,0:7:11.15:0,11,74	0/0:13,0:13:18.10:0,18,138	0/1:17,2:19:96.25:98,0,96	0/1:10,6:15:9.22:216,0,9	0/1:11,0:11:22.91:24,0,23
chr10	10293021	.	TC	T	945.38	PASS	AB=0.970;AC=29;AF=0.518;AN=56;BaseQRankSum=1.555;DP=488;FS=3.013;HRun=1;HaplotypeScore=74.7002;InbreedingCoeff=-0.1329;MQ=52.55;MQ0=41;MQRankSum=-0.790;QD=2.14;ReadPosRankSum=3.283;VQSLOD=-0.7206;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:24:18.57:19,0,145	1/1:4,2:6:11.70:63,12,0	0/1:84,6:7:1.99:2,0,28	0/1:103,10:19:8.19:8,0,69	0/1:15,0:15:3.07:3,0,46	1/1:8,0:8:22.05:123,22,0	1/1:11,0:11:25.52:132,26,0	0/0:14,1:15:39.16:0,39,315	1/1:7,0:7:9.55:79,10,0	0/1:9,0:9:21.34:21,0,56	0/1:8,0:8:10.12:10,0,46	0/1:2,0:2:1.71:2,0,10	0/1:5,0:5:1.97:2,0,18	1/1:10,0:10:2.50:9,2,0	0/1:4,0:4:13.34:22,0,13	0/1:9,0:9:21.43:80,0,21	0/1:27,3:29:55.04:248,0,55	0/1:19,3:19:24.29:156,0,24	0/0:11,0:11:31.88:0,32,236	0/0:11,0:11:23.55:0,24,157	0/0:6,0:5:14.75:0,15,104	0/0:4,0:4:0.13:0,0,28	1/1:9,0:9:3.10:11,3,0	0/1:7,0:7:2.42:2,0,12	0/1:11,0:11:26.28:26,0,55	0/1:18,0:18:6.98:7,0,157	0/1:14,3:15:39.48:70,0,39	0/1:3,0:3:9.42:9,0,14
chr10	10293040	.	G	GT	2162.45	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=-4.101;DP=412;FS=10.139;HRun=9;HaplotypeScore=50.1014;InbreedingCoeff=0.7688;MQ=54.87;MQ0=34;MQRankSum=-2.272;QD=10.87;ReadPosRankSum=1.770;VQSLOD=1.3034;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:18:41.70:0,42,362	1/1:1,4:6:9.02:98,9,0	0/0:77,0:9:5.70:0,6,102	0/1:92,0:20:15.11:15,0,37	0/0:16,0:16:23.99:0,24,206	0/0:6,0:6:17.79:0,18,142	0/0:11,0:10:23.44:0,23,207	0/0:9,0:9:20.75:0,21,182	0/0:5,0:5:15:0,15,130	1/1:1,9:9:15.04:165,15,0	1/1:2,9:11:21.05:220,21,0	0/0:1,0:1:3:0,3,26	0/0:5,0:4:5.97:0,6,52	0/0:11,0:11:9:0,9,78	1/1:0,3:3:9.02:98,9,0	1/1:0,5:5:15.03:158,15,0	1/1:1,23:23:41.03:487,41,0	1/1:2,15:16:35.93:376,36,0	0/0:12,0:10:29.99:0,30,260	0/0:8,0:8:19.66:0,20,169	0/0:5,0:4:8.99:0,9,78	0/0:3,0:3:9:0,9,78	0/0:7,0:7:5.82:0,6,52	0/0:7,0:7:2.81:0,3,26	0/0:9,0:9:24:0,24,208	1/1:1,15:16:44.93:452,45,0	1/1:1,9:8:18.05:199,18,0	1/1:0,3:3:9.02:100,9,0
chr10	10294037	.	A	AGG	1675.65	PASS	AB=0.547;AC=19;AF=0.339;AN=56;BaseQRankSum=0.355;DP=554;FS=5.675;HRun=3;HaplotypeScore=89.6480;InbreedingCoeff=0.8674;MQ=76.65;MQ0=10;MQRankSum=-1.213;QD=10.81;ReadPosRankSum=-0.204;VQSLOD=0.1201;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:92.16:0,92,743	1/1:3,0:3:8.97:73,9,0	0/0:30,0:17:27.15:0,27,295	0/0:55,0:29:55.86:0,56,532	0/0:17,0:17:36.39:0,36,291	0/0:14,0:14:32.92:0,33,270	0/0:14,0:14:35.99:0,36,336	0/0:22,0:21:53.33:0,53,442	0/0:19,0:19:53.12:0,53,421	1/1:19,0:19:47.53:447,48,0	1/1:10,0:10:20.19:159,20,0	0/0:9,0:11:20.04:0,20,170	0/0:11,0:10:29.98:0,30,259	0/0:17,0:17:50.74:0,51,405	1/1:16,1:17:6.02:92,6,0	1/1:8,0:8:14.82:110,15,0	0/1:5,23:28:11.41:98,0,11	1/1:4,12:16:5.03:47,5,0	0/0:16,0:16:39.55:0,40,301	0/0:22,0:22:31.77:0,32,265	0/0:15,0:14:26.97:0,27,226	0/0:21,0:21:44.74:0,45,353	0/0:13,0:13:20.98:0,21,174	0/0:43,0:44:97.57:0,98,782	0/0:21,0:21:32.76:0,33,260	1/1:22,0:22:32.78:394,33,0	1/1:15,0:15:10.31:198,10,0	1/1:15,0:13:27:261,27,0
chr10	10294039	.	G	GGGGAGA	2290.91	PASS	AB=1.000;AC=20;AF=0.357;AN=56;BaseQRankSum=3.587;DP=580;FS=3.352;HRun=0;HaplotypeScore=126.5768;InbreedingCoeff=0.6474;MQ=73.51;MQ0=10;MQRankSum=-2.830;QD=11.29;ReadPosRankSum=-4.020;VQSLOD=1.6886;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:44.29:0,44,648	1/1:4,0:4:8.97:73,9,0	0/0:29,0:16:25.81:0,26,291	0/0:54,0:28:56.01:0,56,529	0/0:12,0:17:35.93:0,36,300	0/0:13,0:16:32.83:0,33,298	0/0:15,0:15:35.23:0,35,403	0/0:27,0:26:48.25:0,48,431	0/0:21,0:21:53.12:0,53,421	1/1:18,0:18:51.46:546,51,0	1/1:12,0:12:20.19:159,20,0	0/0:12,0:12:19.69:0,20,194	0/0:11,0:10:29.98:0,30,275	0/0:17,0:17:18.31:0,18,334	1/1:2,14:19:5.14:116,5,0	0/1:7,0:7:1.63:98,0,2	0/1:29,0:28:17.66:55,0,18	1/1:17,0:16:9:179,9,0	0/1:20,0:20:86.39:86,0,219	0/1:22,0:22:36.66:37,0,228	0/0:13,0:12:26.97:0,27,226	0/0:20,0:20:22.11:0,22,303	0/0:14,0:14:0.07:0,0,150	0/0:42,0:46:61.30:0,61,902	0/0:15,0:22:32.29:0,32,260	1/1:23,0:23:64.04:583,64,0	1/1:17,0:17:31.17:297,31,0	1/1:15,0:13:27:261,27,0
chr10	10295103	.	T	TA	1676.12	PASS	AB=0.830;AC=16;AF=0.286;AN=56;BaseQRankSum=-6.357;DP=530;FS=0.000;HRun=13;HaplotypeScore=64.3992;InbreedingCoeff=0.4594;MQ=75.16;MQ0=0;MQRankSum=-0.460;QD=7.76;ReadPosRankSum=-1.686;VQSLOD=2.0772;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:56,3:59:44.92:0,45,599	0/0:3,0:3:2.96:0,3,21	0/0:12,0:13:19.06:0,19,115	0/0:14,0:13:8.74:0,9,58	0/0:3,0:17:21.25:0,21,74	0/1:6,10:16:20.10:118,0,20	1/1:5,19:25:17.20:407,17,0	1/1:6,15:22:35.84:309,36,0	1/1:2,15:19:33.47:268,33,0	0/0:18,0:18:35.66:0,36,247	0/0:25,1:26:31.62:0,32,362	0/1:14,4:18:72.69:73,0,146	0/0:14,0:14:24.90:0,25,163	0/0:21,0:21:38.45:0,38,267	0/0:21,0:21:35.55:0,36,247	0/0:7,0:7:14.85:0,15,101	0/0:16,1:18:12.78:0,13,222	0/0:12,0:13:22.76:0,23,147	0/1:14,9:24:22.62:228,0,23	1/1:6,10:18:29.67:244,30,0	1/1:4,11:16:21.43:186,21,0	0/1:20,2:23:15.04:15,0,191	0/1:12,0:12:0.56:1,0,120	0/0:29,2:31:6.64:0,7,332	0/0:2,0:16:22.39:0,22,65	0/1:20,2:23:9.18:9,0,224	0/0:14,4:18:13.50:0,13,237	0/0:5,0:5:14.88:0,15,103
chr10	10296591	.	A	AAC	914.65	PASS	AB=0.907;AC=20;AF=0.435;AN=46;BaseQRankSum=-5.388;DP=621;FS=6.082;HRun=0;HaplotypeScore=120.2884;InbreedingCoeff=0.2934;MQ=65.70;MQ0=8;MQRankSum=2.460;QD=3.23;ReadPosRankSum=0.137;VQSLOD=2.2295;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:0:0,0,0	0/1:6,4:11:34.24:76,0,34	./.	./.	0/0:8,0:18:2.11:0,2,6	0/0:12,0:19:14.20:0,14,70	0/0:18,0:21:8.52:0,9,41	./.	0/1:15,0:22:3.51:4,0,33	0/1:24,0:24:34.60:157,0,35	1/1:9,2:11:6.02:79,6,0	0/0:16,0:16:0:0,0,0	0/0:5,0:16:11.36:0,11,56	0/1:11,0:18:2.10:2,0,19	1/1:19,2:20:6.02:88,6,0	0/1:14,9:24:23.12:79,0,23	1/1:21,9:32:15.05:221,15,0	1/1:15,4:22:3.95:46,4,0	0/0:14,0:17:0.89:0,1,2	0/0:8,0:14:2.84:0,3,14	0/1:37,0:37:0:0,0,0	0/0:4,0:9:2.84:0,3,14	./.	./.	0/0:9,0:17:6.91:0,7,26	1/1:18,5:22:12.42:109,12,0	1/1:18,5:23:9.03:133,9,0	1/1:14,0:14:6:58,6,0
chr10	10297458	.	C	CAAATAAATAAATAAAT	5749.89	PASS	AC=28;AF=0.933;AN=30;BaseQRankSum=1.288;DP=233;FS=0.000;HRun=0;HaplotypeScore=98.2384;InbreedingCoeff=0.1924;MQ=66.54;MQ0=0;MQRankSum=-1.288;QD=40.78;ReadPosRankSum=0.933;VQSLOD=4.0411;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,0:8:6.02:253,6,0	./.	./.	./.	1/1:3,0:3:2.22:7,2,0	./.	1/1:9,0:9:3:25,3,0	0/0:22,0:22:2.81:0,3,22	./.	1/1:4,0:6:9.03:411,9,0	./.	./.	1/1:5,1:7:9.03:501,9,0	1/1:9,0:9:6.02:286,6,0	./.	1/1:2,0:2:3.01:128,3,0	1/1:28,0:28:33.11:1720,33,0	1/1:14,0:14:6.02:341,6,0	./.	./.	./.	1/1:8,0:8:3.01:197,3,0	./.	./.	1/1:12,2:15:18.06:1059,18,0	1/1:13,0:13:6.02:406,6,0	1/1:11,0:11:6.02:269,6,0	1/1:8,0:8:3.01:146,3,0
chr10	10297607	.	GACAC	G	2844.87	PASS	AB=0.737;AC=36;AF=0.667;AN=54;BaseQRankSum=-1.045;DP=491;FS=4.700;HRun=0;HaplotypeScore=93.0993;InbreedingCoeff=0.2970;MQ=53.20;MQ0=18;MQRankSum=0.214;QD=8.67;ReadPosRankSum=1.134;VQSLOD=2.0181;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:32:15.78:48,0,16	1/1:1,1:3:2.48:46,2,0	./.	0/0:44,0:16:5.92:0,6,39	0/1:4,1:8:16.05:41,0,16	0/0:13,0:13:23.62:0,24,214	0/0:24,0:25:29.46:0,29,375	0/1:20,0:19:30.24:30,0,42	0/0:13,0:13:10.52:0,11,116	1/1:14,5:20:15.03:196,15,0	1/1:10,7:18:20.93:299,21,0	1/1:5,8:14:17.92:231,18,0	1/1:2,0:8:14.89:119,15,0	1/1:8,0:12:5.09:54,5,0	1/1:5,4:10:10.71:128,11,0	1/1:5,3:9:12.03:170,12,0	1/1:20,10:32:29.19:489,29,0	0/1:15,11:28:20.80:435,0,21	0/0:15,0:18:18.04:0,18,163	0/1:4,2:12:26.40:80,0,26	0/1:19,0:28:31.06:31,0,112	1/1:3,0:12:2.56:51,3,0	0/0:4,0:8:0.32:0,0,1	1/1:9,0:18:3.90:47,4,0	1/1:4,5:10:14.08:194,14,0	1/1:9,4:13:9.03:139,9,0	1/1:5,5:9:6.02:95,6,0	1/1:5,2:7:6.02:95,6,0
chr10	10299299	.	C	CGTGT	2092.80	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=10.834;DP=660;FS=8.077;HRun=0;HaplotypeScore=212.5254;InbreedingCoeff=-0.2682;MQ=43.40;MQ0=5;MQRankSum=-8.832;QD=4.36;ReadPosRankSum=6.998;VQSLOD=0.8325;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:2.92:0,3,153	0/1:12,0:12:28.41:28,0,105	0/1:27,0:11:23.65:24,0,61	0/0:24,0:14:9.22:0,9,97	0/0:13,0:13:15:0,15,160	1/1:5,17:24:18.05:387,18,0	1/1:36,2:41:36.42:326,36,0	0/0:15,0:15:13.36:0,13,268	1/1:5,18:26:21.07:497,21,0	0/1:21,0:21:12.03:12,0,374	0/0:14,0:14:14.99:0,15,164	0/1:35,0:35:55.27:152,0,55	0/1:26,0:26:99:189,0,231	0/1:31,0:31:9.09:188,0,9	0/1:33,0:33:99:136,0,185	0/1:19,0:19:39.42:39,0,117	0/1:24,0:24:9.82:10,0,111	0/1:17,0:17:31.18:31,0,158	0/1:22,0:16:27.48:27,0,203	0/0:15,0:15:20.41:0,20,165	0/0:56,0:54:23.61:0,24,151	0/0:12,0:12:6.42:0,6,46	0/1:16,0:15:23.27:23,0,33	0/1:37,0:37:8.17:8,0,195	0/1:25,0:23:11.23:11,0,120	0/1:21,0:21:49.13:49,0,174	0/1:15,0:15:68.21:96,0,68	0/1:7,0:7:27.05:28,0,27
chr10	10299303	.	C	CGT	1181.30	PASS	AB=0.990;AC=20;AF=0.357;AN=56;BaseQRankSum=11.241;DP=660;FS=0.484;HRun=0;HaplotypeScore=202.4847;InbreedingCoeff=-0.2476;MQ=41.31;MQ0=6;MQRankSum=-8.417;QD=2.78;ReadPosRankSum=5.870;VQSLOD=1.9619;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:31,1:32:3.89:4,0,178	0/1:12,0:12:5.04:5,0,140	0/0:27,0:9:18.06:0,18,243	0/0:23,0:13:31.77:0,32,349	0/0:12,0:12:6.02:0,6,86	1/1:21,0:21:18.01:176,18,0	0/1:39,0:38:40.46:138,0,40	0/1:17,0:17:36.92:37,0,275	1/1:23,0:23:21:202,21,0	0/1:22,1:23:99:111,0,370	0/0:13,0:13:9:0,9,105	0/1:37,0:37:53.23:53,0,91	0/1:24,1:25:99:118,0,253	0/1:30,0:30:47.38:47,0,51	0/1:35,0:35:99:106,0,105	0/1:18,0:18:7.19:7,0,141	0/1:26,0:26:15.48:15,0,146	0/0:20,0:20:9.03:0,9,169	0/1:24,0:17:8.87:9,0,303	0/0:14,0:14:14.95:0,15,166	0/0:55,0:53:15.56:0,16,153	0/0:12,0:12:3:0,3,26	0/1:17,0:16:15.45:25,0,15	0/0:30,5:35:12.85:0,13,206	0/0:24,0:22:14.41:0,14,177	0/1:22,1:23:99:145,0,171	0/1:15,0:15:47.93:48,0,51	0/1:8,0:8:25.86:99,0,26
chr10	10299307	.	C	CGTGTGT	8806.13	PASS	AB=0.778;AC=44;AF=0.786;AN=56;BaseQRankSum=2.064;DP=678;FS=3.311;HRun=0;HaplotypeScore=206.3049;InbreedingCoeff=0.7021;MQ=41.04;MQ0=6;MQRankSum=-3.684;QD=15.16;ReadPosRankSum=4.031;VQSLOD=4.3680;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:28,4:33:15.07:254,15,0	1/1:8,3:11:20.39:379,20,0	0/0:28,0:11:22.69:0,23,351	0/0:25,0:14:31.85:0,32,340	0/0:10,0:10:5.95:0,6,141	1/1:21,0:21:18.05:281,18,0	1/1:37,0:36:12.91:189,13,0	1/1:17,0:17:21.19:253,21,0	1/1:23,0:23:21.07:350,21,0	1/1:22,1:24:33.14:620,33,0	0/0:9,3:12:2.49:0,2,10	1/1:7,30:43:30.74:909,31,0	1/1:18,6:25:17.97:926,18,0	1/1:8,22:34:24.01:622,24,0	1/1:19,13:32:30:877,30,0	1/1:10,6:21:11.93:186,12,0	1/1:8,13:25:18.03:457,18,0	1/1:5,14:22:9.27:253,9,0	0/1:24,0:17:2.51:176,0,3	1/1:12,0:14:8.89:75,9,0	1/1:12,1:61:2.96:21,3,0	0/1:2,6:10:0:0,0,0	1/1:5,11:18:6.02:197,6,0	1/1:32,3:36:9:190,9,0	0/0:22,0:20:14.60:0,15,234	1/1:17,6:23:48.01:932,48,0	1/1:3,10:17:7.76:268,8,0	1/1:4,3:7:12.85:390,13,0
chr10	10300682	.	G	GGT	3529.41	PASS	AB=0.826;AC=35;AF=0.673;AN=52;BaseQRankSum=-0.400;DP=674;FS=3.135;HRun=0;HaplotypeScore=133.5558;InbreedingCoeff=-0.2431;MQ=72.92;MQ0=10;MQRankSum=1.436;QD=6.46;ReadPosRankSum=-0.514;VQSLOD=3.3474;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:42,1:42:10.36:267,10,0	1/1:6,0:6:2.99:24,3,0	./.	./.	1/1:20,0:20:5.85:59,6,0	0/0:23,0:23:27.07:0,27,293	0/0:27,0:28:20.85:0,21,201	1/1:26,0:26:7.13:40,7,0	0/1:11,0:16:28.52:29,0,78	1/1:18,5:25:18.74:237,19,0	0/1:16,0:16:26.50:29,0,26	1/1:12,8:19:4.33:210,4,0	0/1:13,1:14:35.63:36,0,38	0/1:11,7:19:35.65:36,0,48	0/1:23,11:36:55.85:324,0,56	1/1:19,7:27:12.04:167,12,0	0/1:11,2:15:19.29:151,0,19	0/1:16,8:26:33.56:239,0,34	1/1:16,0:16:2.94:18,3,0	1/1:10,0:15:2.82:17,3,0	1/1:33,1:37:1.75:6,2,0	0/1:18,10:28:47:160,0,47	0/1:10,3:13:17.41:161,0,17	0/1:35,12:48:39.95:636,0,40	0/1:10,3:13:14.32:181,0,14	0/1:19,4:25:10.66:158,0,11	0/1:21,5:25:55.47:276,0,55	1/1:12,0:11:8.96:69,9,0
chr10	10300964	.	T	TC	15770.77	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=8.398;DP=552;FS=7.202;HRun=1;HaplotypeScore=93.2640;InbreedingCoeff=0.9737;MQ=90.37;MQ0=7;MQRankSum=-7.462;QD=35.28;ReadPosRankSum=3.561;VQSLOD=4.7444;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,47:48:99:1494,105,0	1/1:1,2:3:6.02:86,6,0	0/0:26,0:26:61.24:0,61,747	0/0:27,0:27:63.20:0,63,807	1/1:0,17:17:42.05:550,42,0	0/0:16,0:16:48.16:0,48,620	0/0:19,0:19:57.17:0,57,723	1/1:2,24:24:72.21:995,72,0	0/0:17,0:17:48.14:0,48,607	1/1:0,16:16:45.15:641,45,0	1/1:0,17:17:36.12:519,36,0	1/1:2,10:12:33.10:462,33,0	1/1:1,23:24:60.31:866,60,0	1/1:1,21:21:57.19:825,57,0	1/1:1,18:19:42.14:607,42,0	1/1:1,15:16:45.15:651,45,0	1/1:0,25:25:69.23:1001,69,0	1/1:0,11:11:33.11:479,33,0	1/1:1,14:15:45.14:620,45,0	1/1:1,21:21:51.13:715,51,0	1/1:4,25:28:81.24:1116,81,0	1/1:0,15:15:27.09:387,27,0	1/1:0,17:17:44.75:646,45,0	1/1:0,24:24:63.21:910,63,0	1/1:0,23:22:48.16:695,48,0	1/1:1,21:20:57.17:788,57,0	1/1:1,9:10:18.04:240,18,0	1/1:0,12:12:33.11:478,33,0
chr10	10301308	.	G	GTGTTTGTT	22389.28	PASS	AB=0.611;AC=36;AF=0.643;AN=56;BaseQRankSum=-2.859;DP=655;FS=1.944;HRun=0;HaplotypeScore=185.5434;InbreedingCoeff=0.7823;MQ=65.60;MQ0=2;MQRankSum=-12.330;QD=54.21;ReadPosRankSum=-0.403;VQSLOD=4.6833;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,15:34:63.22:2203,63,0	1/1:2,6:8:21.07:801,21,0	0/0:31,0:22:0.29:0,0,276	0/0:31,0:25:15.03:0,15,310	0/1:3,0:15:49.33:157,0,49	0/0:26,0:26:54.18:0,54,1278	0/0:28,0:28:9.13:0,9,663	0/0:32,0:32:51.10:0,51,963	0/0:19,0:19:30.07:0,30,660	1/1:10,15:28:63.09:2029,63,0	1/1:8,6:15:21.07:705,21,0	1/1:10,15:27:36.12:1486,36,0	1/1:4,9:14:12.76:1098,13,0	1/1:6,13:20:42.14:1716,42,0	1/1:8,10:18:18.06:658,18,0	1/1:10,8:18:30.10:987,30,0	1/1:14,6:20:18.06:727,18,0	1/1:14,13:30:39.13:1484,39,0	0/0:28,0:27:36.11:0,36,770	0/0:16,0:16:36.11:0,36,802	0/0:31,0:31:48.14:0,48,1091	1/1:5,7:14:21.07:663,21,0	1/1:5,14:22:42.14:1373,42,0	1/1:21,17:40:20.46:1315,20,0	0/1:11,0:22:39.98:230,0,40	1/1:8,16:27:60.07:1850,60,0	1/1:11,19:31:57.20:2351,57,0	1/1:4,6:10:15.05:556,15,0
chr10	10302542	.	A	AT	19872.83	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-11.785;DP=692;FS=8.810;HRun=5;HaplotypeScore=65.8278;InbreedingCoeff=0.9792;MQ=79.63;MQ0=0;MQRankSum=-5.187;QD=35.11;ReadPosRankSum=3.630;VQSLOD=4.6825;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,26:29:72.23:941,72,0	1/1:1,17:18:51.17:670,51,0	0/0:22,0:22:54.13:0,54,578	0/0:23,0:22:36.96:0,37,403	1/1:3,19:22:54.18:711,54,0	0/0:26,0:26:72.18:0,72,774	0/0:19,0:19:51.13:0,51,548	1/1:1,35:36:99:1350,105,0	0/0:35,0:35:93.21:0,93,991	1/1:4,28:32:87.27:1128,87,0	1/1:2,22:24:69.22:903,69,0	1/1:1,18:19:45.14:582,45,0	1/1:1,19:20:51.17:671,51,0	1/1:1,20:21:60.19:784,60,0	1/1:3,35:38:99:1303,99,0	1/1:3,14:17:6.88:442,7,0	1/1:5,20:25:60.19:781,60,0	1/1:0,21:21:63.20:829,63,0	1/1:3,10:13:33.11:430,33,0	1/1:1,24:25:72.17:910,72,0	1/1:0,19:19:54.18:711,54,0	1/1:2,33:35:99:1303,99,0	1/1:1,24:25:66.21:868,66,0	1/1:1,24:25:60.20:790,60,0	1/1:2,17:19:48.16:632,48,0	1/1:1,43:44:99:1638,126,0	1/1:0,29:29:87.28:1144,87,0	1/1:0,10:10:27.09:355,27,0
chr10	10302668	.	G	GGACA	13259.22	PASS	AB=0.978;AC=23;AF=0.411;AN=56;BaseQRankSum=5.716;DP=928;FS=18.251;HRun=0;HaplotypeScore=268.1863;InbreedingCoeff=-0.6970;MQ=49.10;MQ0=14;MQRankSum=-2.533;QD=17.40;ReadPosRankSum=1.051;VQSLOD=3.2012;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:45,0:45:99:923,0,214	0/1:17,0:17:65.37:65,0,92	0/0:39,0:19:44.93:0,45,683	0/0:34,0:16:31.80:0,32,451	0/1:40,0:41:99:505,0,151	0/0:35,0:35:99:0,105,1952	0/0:21,0:21:60.21:0,60,1111	0/1:52,0:47:99:715,0,793	0/0:37,0:37:99:0,111,2037	0/1:39,0:38:99:956,0,332	0/1:27,0:27:99:445,0,205	0/1:27,0:26:99:510,0,153	0/1:41,0:41:99:904,0,338	0/1:37,0:38:99:673,0,150	0/1:46,0:46:99:1105,0,387	0/1:11,18:31:99:141,0,244	0/1:25,0:25:99:359,0,239	0/1:24,0:24:99:558,0,240	0/1:29,0:28:99:115,0,590	0/1:37,0:37:99:829,0,207	0/1:27,0:27:99:344,0,244	0/1:30,0:29:99:359,0,204	0/1:28,0:27:99:613,0,166	0/1:35,0:36:99:305,0,143	0/1:31,0:31:99:819,0,131	0/1:42,0:41:99:981,0,558	0/1:32,0:32:99:592,0,258	0/1:15,0:15:46.13:444,0,46
chr10	10302669	.	G	GACAG	13189.18	PASS	AB=0.974;AC=23;AF=0.411;AN=56;BaseQRankSum=5.303;DP=923;FS=20.194;HRun=0;HaplotypeScore=266.8130;InbreedingCoeff=-0.6970;MQ=49.19;MQ0=14;MQRankSum=-2.182;QD=17.38;ReadPosRankSum=2.241;VQSLOD=2.7923;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:43,0:43:99:923,0,214	0/1:8,8:17:65.37:65,0,92	0/0:37,0:18:44.93:0,45,683	0/0:33,0:16:31.80:0,32,451	0/1:41,0:41:99:505,0,151	0/0:35,0:35:99:0,105,1952	0/0:21,0:21:60.21:0,60,1111	0/1:33,17:46:99:715,0,793	0/0:38,0:38:99:0,111,2037	0/1:38,0:37:99:932,0,347	0/1:27,0:27:99:445,0,205	0/1:26,0:25:99:510,0,153	0/1:43,0:43:99:904,0,338	0/1:37,0:37:99:673,0,150	0/1:47,0:47:99:1105,0,387	0/1:33,0:32:99:141,0,244	0/1:26,0:26:99:359,0,239	0/1:25,0:25:99:528,0,243	0/1:28,0:27:99:99,0,593	0/1:37,0:37:99:829,0,207	0/1:27,0:26:99:344,0,244	0/1:30,0:29:99:359,0,204	0/1:29,0:28:99:613,0,166	0/1:36,0:36:99:305,0,143	0/1:31,0:31:99:819,0,131	0/1:40,0:39:99:981,0,558	0/1:32,0:32:99:592,0,258	0/1:15,0:15:46.13:444,0,46
chr10	10304116	.	G	GCA	8393.81	PASS	AB=0.903;AC=36;AF=0.643;AN=56;BaseQRankSum=3.638;DP=678;FS=29.114;HRun=0;HaplotypeScore=137.3577;InbreedingCoeff=0.6263;MQ=53.34;MQ0=23;MQRankSum=-0.131;QD=19.03;ReadPosRankSum=2.249;VQSLOD=3.0122;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:15,26:41:18.29:592,0,18	1/1:0,5:5:9.03:149,9,0	0/0:58,0:7:9.02:0,9,102	0/0:57,0:11:11.94:0,12,219	0/1:20,0:19:16.16:53,0,16	0/0:20,0:20:51.16:0,51,656	0/0:30,0:30:81.24:0,81,1021	0/0:9,0:9:6.32:0,6,45	0/0:19,0:19:51.11:0,51,599	1/1:7,16:23:48.82:737,49,0	1/1:5,14:19:33:505,33,0	1/1:13,17:32:33.05:656,33,0	1/1:8,15:23:31.93:499,32,0	1/1:7,16:24:27.56:446,28,0	1/1:4,10:14:15.05:232,15,0	1/1:6,13:19:23.95:384,24,0	1/1:5,21:26:32.32:476,32,0	1/1:9,21:30:9.62:679,10,0	0/1:13,0:13:37.25:55,0,37	0/0:15,0:15:28.40:0,28,199	0/0:29,0:28:12.42:0,12,275	1/1:9,15:25:27.09:425,27,0	1/1:7,11:18:15.05:243,15,0	1/1:9,22:32:33.25:772,33,0	0/1:29,0:28:61.77:62,0,90	1/1:11,10:20:41.85:741,42,0	1/1:8,14:21:14.75:539,15,0	1/1:1,3:4:9.03:149,9,0
chr10	10304129	.	C	CCA	928.12	PASS	AB=0.929;AC=13;AF=0.232;AN=56;BaseQRankSum=3.354;DP=680;FS=1.978;HRun=0;HaplotypeScore=159.5115;InbreedingCoeff=0.2157;MQ=51.39;MQ0=24;MQRankSum=-1.064;QD=4.16;ReadPosRankSum=-1.868;VQSLOD=2.6207;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:39:8.60:0,9,183	0/0:4,0:4:1.35:0,1,4	0/0:50,0:7:3.01:0,3,34	0/0:55,0:11:4.80:0,5,26	1/1:9,0:24:15.79:73,16,0	0/0:18,0:21:41.61:0,42,410	0/0:29,0:29:56.99:0,57,601	0/1:14,0:14:31.48:217,0,31	0/0:17,0:17:39.09:0,39,425	0/0:22,0:21:19.91:0,20,127	0/0:19,0:19:7.53:0,8,73	0/0:32,0:32:2.68:0,3,198	0/0:21,0:21:11.51:0,12,128	0/0:24,0:25:14.84:0,15,133	0/0:13,0:13:3.65:0,4,36	0/0:17,0:17:4.94:0,5,13	0/1:28,0:28:2.57:3,0,93	0/0:29,0:29:19.03:0,19,118	1/1:8,6:13:23.87:304,24,0	0/1:10,6:17:52.94:115,0,53	0/1:26,3:30:7.55:235,0,8	0/1:21,0:21:13.45:13,0,53	0/1:18,0:17:7.25:7,0,92	0/0:29,0:29:12.45:0,12,90	1/1:11,0:30:26.37:109,26,0	0/0:28,0:26:13.85:0,14,223	0/1:21,0:20:7.15:7,0,113	0/0:5,0:6:3.60:0,4,43
chr10	10306037	.	A	AG	26210.34	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=10.376;DP=736;FS=1.210;HRun=0;HaplotypeScore=115.6231;InbreedingCoeff=0.9997;MQ=89.77;MQ0=0;MQRankSum=-8.907;QD=42.34;ReadPosRankSum=5.957;VQSLOD=4.1464;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,64:65:99:2599,165,0	1/1:0,9:9:27.09:428,27,0	0/0:28,0:28:78.18:0,78,985	0/0:27,0:27:78.23:0,78,1054	1/1:0,24:24:72.25:1148,72,0	0/0:22,0:22:66.19:0,66,879	0/0:19,0:19:54.18:0,54,755	1/1:3,28:31:87.29:1347,87,0	0/0:21,0:21:63.21:0,63,881	1/1:1,28:29:87.30:1369,87,0	1/1:3,13:16:38.98:561,39,0	1/1:0,24:24:69.24:1101,69,0	1/1:1,23:24:57.19:910,57,0	1/1:1,29:30:78.11:1175,78,0	1/1:0,26:26:72.25:1149,72,0	1/1:0,21:21:54.18:862,54,0	1/1:1,36:37:87.30:1386,87,0	1/1:2,28:30:84.29:1334,84,0	1/1:2,29:31:93.27:1391,93,0	1/1:2,18:20:54.03:801,54,0	1/1:0,49:49:99:2201,138,0	1/1:1,22:23:66.14:1019,66,0	1/1:1,27:28:75.26:1196,75,0	1/1:1,22:23:55.43:865,55,0	1/1:0,15:15:45.15:718,45,0	1/1:0,26:26:75.23:1167,75,0	1/1:2,17:19:48.16:757,48,0	1/1:1,17:19:48.09:725,48,0
chr10	10306237	.	T	TG	6432.04	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=9.258;DP=802;FS=0.660;HRun=5;HaplotypeScore=103.2560;InbreedingCoeff=0.9982;MQ=84.98;MQ0=0;MQRankSum=-3.257;QD=31.84;ReadPosRankSum=-1.139;VQSLOD=4.0673;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,111,1183	0/0:7,0:7:18.05:0,18,193	0/0:33,0:33:84.19:0,84,885	0/0:19,0:19:46.92:0,47,482	1/1:4,29:33:78.25:1023,78,0	0/0:23,0:23:63.12:0,63,658	0/0:31,0:31:75.14:0,75,788	1/1:3,24:27:72.22:932,72,0	0/0:23,0:23:69.17:0,69,742	0/0:23,0:23:60.14:0,60,639	0/0:17,0:17:51.11:0,51,540	0/0:29,0:29:84.19:0,84,894	0/0:28,0:28:72.16:0,72,766	0/0:26,0:26:69.17:0,69,742	0/0:25,0:25:69.17:0,69,742	0/0:23,0:23:63.14:0,63,668	0/0:62,0:62:99:0,171,1829	0/0:33,0:33:90.22:0,90,967	1/1:8,19:27:63.18:801,63,0	1/1:2,15:17:39.13:508,39,0	1/1:8,63:70:99:2289,175,0	0/0:33,0:33:87.20:0,87,924	0/0:21,0:21:51.11:0,51,539	0/0:40,0:40:99:0,114,1219	1/1:5,22:27:69.20:879,69,0	0/0:25,0:25:63.05:0,63,652	0/0:29,0:28:84.21:0,84,903	0/0:10,0:10:30.08:0,30,322
chr10	10307473	.	TGAA	T	3877.72	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=1.150;DP=621;FS=0.431;HRun=0;HaplotypeScore=117.8551;InbreedingCoeff=0.9953;MQ=86.54;MQ0=0;MQRankSum=-5.274;QD=42.61;ReadPosRankSum=-3.102;VQSLOD=3.9764;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,147,3125	0/0:6,0:6:18.06:0,18,397	0/0:19,0:19:38.47:0,38,751	0/0:26,0:26:60.18:0,60,1133	0/0:19,0:19:51.13:0,51,1078	0/0:19,0:19:57.20:0,57,1248	0/0:28,0:28:81.28:0,81,1729	1/1:0,20:20:60.18:906,60,0	0/0:17,0:17:51.16:0,51,1084	0/0:22,0:22:60.21:0,60,1311	0/0:21,0:21:57.07:0,57,1118	0/0:21,0:21:60.21:0,60,1292	0/0:19,0:19:51.18:0,51,1125	0/0:22,0:22:63.19:0,63,1306	0/0:23,0:23:63.20:0,63,1349	0/0:18,0:18:51.18:0,51,1126	0/0:31,0:31:90.31:0,90,1987	0/0:32,0:32:84.25:0,84,1807	1/1:2,21:23:63.21:1012,63,0	1/1:2,14:16:36.12:578,36,0	1/1:0,32:32:87.30:1382,87,0	0/0:27,0:27:75.21:0,75,1609	0/0:10,0:10:30.10:0,30,661	0/0:25,0:25:75.24:0,75,1615	0/0:20,0:20:60.16:0,60,1263	0/0:28,0:28:81.28:0,81,1789	0/0:21,0:21:57.16:0,57,1174	0/0:6,0:6:18.06:0,18,364
chr10	10307803	.	GACACACACATACAC	G	1596.37	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=1.153;DP=549;FS=8.260;HRun=0;HaplotypeScore=199.1107;InbreedingCoeff=0.3640;MQ=69.83;MQ0=10;MQRankSum=-2.567;QD=8.92;ReadPosRankSum=-0.124;VQSLOD=1.1885;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:60.40:0,60,1187	0/0:4,0:4:9.02:0,9,436	0/0:33,0:22:41.07:0,41,397	0/0:57,0:40:70.20:0,70,767	1/1:31,0:30:1.06:60,1,0	1/1:14,3:16:6.07:442,6,0	1/1:20,1:21:44.84:384,45,0	0/1:20,0:20:13.90:255,0,14	1/1:3,10:13:3.01:122,3,0	0/0:12,0:12:30.07:0,30,836	0/0:11,0:11:17.83:0,18,669	0/0:16,0:14:30.03:0,30,877	0/0:15,0:15:31.72:0,32,770	0/0:17,0:17:32.57:0,33,1199	0/0:23,0:23:26.87:0,27,829	0/0:20,0:20:48.08:0,48,1697	0/0:16,0:16:35.29:0,35,880	0/0:11,0:11:23.97:0,24,832	0/1:12,0:12:88.77:175,0,89	0/1:21,0:21:99:159,0,264	0/1:28,0:26:90.44:103,0,90	0/0:23,0:23:41.95:0,42,834	0/0:18,0:17:39:0,39,950	0/0:23,0:23:32.94:0,33,659	0/1:16,0:15:54.84:55,0,348	0/0:18,0:18:36.02:0,36,525	0/0:13,0:13:33.07:0,33,1339	0/0:11,0:11:29.95:0,30,958
chr10	10307813	.	T	TACAC	970.53	PASS	AB=0.978;AC=35;AF=0.673;AN=52;BaseQRankSum=-1.900;DP=575;FS=1.209;HRun=0;HaplotypeScore=137.8969;InbreedingCoeff=0.3316;MQ=54.03;MQ0=12;MQRankSum=0.477;QD=2.71;ReadPosRankSum=0.008;VQSLOD=2.1075;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,7:37:2.88:0,3,26	1/1:3,0:3:2.99:23,3,0	./.	./.	0/1:30,0:28:0:0,0,0	0/0:15,0:14:11.07:0,11,69	0/0:20,0:20:2.60:0,3,10	1/1:23,0:23:7.01:18,7,0	0/0:11,0:11:2.79:0,3,28	0/1:17,0:17:15.66:40,0,16	0/0:9,0:16:6:0,6,56	1/1:15,0:13:6.49:72,6,0	1/1:15,0:15:6:64,6,0	1/1:14,0:14:14.34:206,14,0	1/1:15,7:22:3.01:70,3,0	1/1:26,0:26:12.46:123,12,0	0/0:18,0:19:3.13:0,3,46	1/1:8,0:14:1.62:10,2,0	1/1:16,0:16:2.98:21,3,0	1/1:21,0:21:6.02:85,6,0	0/0:28,0:26:0.34:0,0,0	1/1:19,10:30:4.41:74,4,0	1/1:20,0:19:6.01:94,6,0	1/1:15,14:30:3.01:70,3,0	1/1:16,0:15:5.38:67,5,0	1/1:18,0:18:1.06:44,1,0	0/1:13,0:14:6.60:7,0,9	1/1:10,0:13:4.38:22,4,0
chr10	10307942	.	G	GGGTGTCC	9238.44	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-4.978;DP=487;FS=20.995;HRun=0;HaplotypeScore=112.8366;InbreedingCoeff=0.9831;MQ=84.92;MQ0=0;MQRankSum=-12.506;QD=81.04;ReadPosRankSum=-3.212;VQSLOD=2.7336;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:26:78.27:0,78,2066	0/0:10,0:10:30.10:0,30,774	0/0:15,0:15:39.13:0,39,932	0/0:25,0:25:59.54:0,60,1268	0/0:20,0:20:54.18:0,54,1419	1/1:5,12:19:45.15:1781,45,0	1/1:12,8:22:46.87:1992,47,0	1/1:10,7:20:54.16:1833,54,0	1/1:1,9:12:27.09:1100,27,0	0/0:9,0:9:27.09:0,27,728	0/0:17,0:17:51.18:0,51,1341	0/0:21,0:21:60.16:0,60,1554	0/0:11,0:11:30.10:0,30,786	0/0:18,0:18:51.18:0,51,1334	0/0:23,0:23:63.17:0,63,1636	0/0:22,0:22:63.22:0,63,1665	0/0:16,0:16:48.16:0,48,1263	0/0:20,0:20:54.19:0,54,1446	1/1:5,7:13:33.11:1257,33,0	1/1:4,8:14:29.99:978,30,0	1/1:9,3:14:11.98:297,12,0	0/0:20,0:20:60.20:0,60,1561	0/0:15,0:15:42.14:0,42,1132	0/0:19,0:19:54.19:0,54,1451	0/0:26,0:26:78.27:0,78,2028	0/0:17,0:17:48.16:0,48,1267	0/0:19,0:19:57.20:0,57,1537	0/0:3,0:3:9.03:0,9,243
chr10	10309844	.	A	AG	1022.66	PASS	AB=0.841;AC=17;AF=0.304;AN=56;BaseQRankSum=12.317;DP=667;FS=28.378;HRun=0;HaplotypeScore=122.6823;InbreedingCoeff=-0.4184;MQ=48.87;MQ0=24;MQRankSum=-3.271;QD=2.58;ReadPosRankSum=4.712;VQSLOD=0.8720;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:12,9:21:66.65:75,0,67	0/1:10,0:10:13.18:55,0,13	0/0:52,0:14:7.48:0,7,154	0/1:73,0:10:5.39:5,0,47	0/0:24,0:24:62.63:0,63,456	0/0:19,0:19:30.90:0,31,243	0/0:26,0:25:44.90:0,45,334	0/0:26,0:23:52.24:0,52,399	0/0:20,0:20:28.01:0,28,201	0/1:17,11:28:58.92:204,0,59	0/1:13,7:20:43.21:90,0,43	0/1:10,13:23:14.04:35,0,14	0/1:12,10:22:33.46:33,0,59	0/0:14,0:26:9.60:0,10,138	0/1:19,0:26:8.79:9,0,134	0/1:20,0:20:85.34:85,0,94	0/1:16,8:24:19.56:20,0,153	0/1:15,0:15:42.58:43,0,59	0/0:18,0:18:48.35:0,48,348	0/0:26,0:26:43.81:0,44,304	0/0:8,0:7:14.08:0,14,96	0/1:14,8:22:67.51:77,0,68	0/1:13,0:22:32.52:58,0,33	0/1:13,0:12:73.88:74,0,82	0/0:25,0:24:49.71:0,50,412	0/1:19,4:22:53.01:85,0,53	0/1:26,0:26:76.35:173,0,76	0/1:8,0:7:14.91:58,0,15
chr10	10309849	.	A	AAAG	7109.31	PASS	AB=0.911;AC=35;AF=0.625;AN=56;BaseQRankSum=9.384;DP=669;FS=5.993;HRun=0;HaplotypeScore=121.8581;InbreedingCoeff=0.7678;MQ=51.19;MQ0=25;MQRankSum=-3.723;QD=15.73;ReadPosRankSum=6.658;VQSLOD=3.9175;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,4:21:29.87:326,30,0	0/1:7,4:11:4.03:241,0,4	0/0:55,0:15:4.51:0,5,101	0/1:82,0:13:0.13:0,0,83	0/0:23,0:23:30.76:0,31,321	0/0:18,0:18:28.07:0,28,210	0/0:27,0:26:43.88:0,44,321	0/0:26,0:23:47.70:0,48,414	0/0:17,0:17:25.91:0,26,178	1/1:18,5:26:73.50:708,73,0	1/1:12,8:21:44.16:531,44,0	1/1:16,5:22:20.97:280,21,0	1/1:13,6:21:22.88:357,23,0	1/1:19,7:26:11.40:296,11,0	1/1:14,9:25:43.79:607,44,0	1/1:15,6:21:36.53:403,37,0	1/1:17,6:23:19.21:326,19,0	1/1:8,6:15:19.43:341,19,0	0/0:18,0:18:20.75:0,21,210	0/1:27,0:27:11.91:12,0,182	0/0:8,0:7:0.46:0,0,39	1/1:13,8:21:35.09:425,35,0	1/1:9,9:19:35.85:491,36,0	1/1:10,2:12:24.23:318,24,0	0/0:25,0:24:41.23:0,41,356	1/1:8,11:22:55.02:668,55,0	1/1:18,4:26:61.47:566,61,0	1/1:7,1:9:23.01:214,23,0
chr10	10310151	.	G	GGA	11246.63	PASS	AB=0.765;AC=33;AF=0.589;AN=56;BaseQRankSum=-9.741;DP=586;FS=9.760;HRun=0;HaplotypeScore=91.4654;InbreedingCoeff=0.7491;MQ=78.80;MQ0=2;MQRankSum=-0.965;QD=28.91;ReadPosRankSum=2.507;VQSLOD=6.4926;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,27:36:74.28:1195,74,0	1/1:4,5:9:12.04:198,12,0	0/0:32,0:30:15.75:0,16,404	0/1:36,0:26:10.37:10,0,344	0/0:13,0:13:21.04:0,21,238	0/0:10,0:10:30.05:0,30,357	0/0:29,0:29:57.03:0,57,777	0/0:23,0:23:30.09:0,30,374	0/0:28,0:28:24.86:0,25,744	1/1:4,19:23:54.16:828,54,0	1/1:3,8:11:21.03:316,21,0	1/1:10,12:22:9.37:470,9,0	0/1:10,18:28:14.87:827,0,15	1/1:12,14:26:4.60:579,5,0	1/1:9,27:37:69.24:1138,69,0	1/1:7,14:21:45.15:729,45,0	1/1:4,20:25:54.18:891,54,0	1/1:1,17:18:45.15:743,45,0	0/0:15,0:15:18.05:0,18,220	0/0:16,0:16:42.13:0,42,525	0/0:17,0:17:38.62:0,39,446	1/1:3,12:16:39.13:643,39,0	0/1:6,5:11:22.45:183,0,22	1/1:4,25:28:69.24:1139,69,0	0/0:12,0:12:30.05:0,30,354	1/1:2,11:15:33.10:519,33,0	1/1:4,17:21:39.13:643,39,0	1/1:1,4:5:12.04:194,12,0
chr10	10310932	.	CGTGTGTGTGTGTGTGTGTGTGT	C	11760.73	PASS	AB=0.692;AC=29;AF=0.580;AN=50;BaseQRankSum=9.174;DP=478;FS=16.088;HRun=0;HaplotypeScore=256.1674;InbreedingCoeff=0.7691;MQ=52.28;MQ0=10;MQRankSum=-7.863;QD=46.30;ReadPosRankSum=3.420;VQSLOD=1.9988;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:17,3:20:6.02:351,6,0	1/1:1,7:8:11.59:701,12,0	0/0:29,0:19:3.01:0,3,74	./.	0/0:17,0:17:24.07:0,24,2167	0/0:12,0:17:36.11:0,36,2645	0/0:13,0:18:27.09:0,27,1699	0/0:29,0:34:57.20:0,57,1795	0/0:9,0:15:21.54:0,22,1385	1/1:10,20:25:36.51:1220,37,0	1/1:7,11:17:21.07:1227,21,0	1/1:12,9:18:18.06:1052,18,0	1/1:5,8:12:12.04:701,12,0	1/1:5,11:15:12.04:701,12,0	1/1:11,5:13:6.02:351,6,0	1/1:7,8:15:12.04:701,12,0	1/1:5,2:8:3.01:175,3,0	./.	0/0:8,0:9:6.01:0,6,75	0/0:8,0:14:17.27:0,17,318	0/0:18,0:16:12.04:0,12,468	1/1:11,16:26:33.11:1929,33,0	1/1:8,11:19:21.07:1195,21,0	0/1:10,8:17:99:167,0,176	0/0:19,0:20:33.11:0,33,2362	1/1:5,13:16:33.08:1092,33,0	./.	1/1:5,1:5:6:198,6,0
chr10	10311010	.	AAGATAGAT	A	443.04	PASS	AB=0.824;AC=4;AF=0.074;AN=54;BaseQRankSum=-3.245;DP=540;FS=3.036;HRun=0;HaplotypeScore=230.5721;InbreedingCoeff=0.4284;MQ=54.74;MQ0=12;MQRankSum=-1.654;QD=13.03;ReadPosRankSum=-1.798;VQSLOD=2.3300;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:26:24.01:0,24,730	0/1:9,0:8:11.95:12,0,377	0/0:21,0:11:11.53:0,12,165	0/0:12,0:7:9.02:0,9,199	1/1:6,8:13:9.03:203,9,0	0/0:20,0:20:42.14:0,42,1739	0/0:12,0:12:30.10:0,30,1032	0/0:33,0:31:37.79:0,38,596	0/0:17,0:17:39.13:0,39,1495	0/0:40,0:33:67.41:0,67,1868	0/0:25,0:25:51.13:0,51,1640	0/0:14,0:13:27.09:0,27,878	0/0:24,0:22:45.09:0,45,1368	0/0:25,0:24:42.08:0,42,1304	0/0:21,0:20:33.05:0,33,981	0/0:20,0:20:42.04:0,42,1150	0/0:17,0:15:26.58:0,27,523	0/0:7,0:8:12.04:0,12,389	0/0:6,0:9:16.25:0,16,308	0/0:7,0:12:0.89:0,1,2	./.	0/0:22,0:22:39.13:0,39,1271	0/0:25,0:24:36.12:0,36,1165	0/0:16,0:15:24:0,24,699	0/1:5,6:10:7.94:333,0,8	0/0:38,0:38:90.23:0,90,2437	0/0:21,0:20:51.01:0,51,1440	0/0:5,0:4:5.95:0,6,116
chr10	10311095	.	TGATA	T	121.35	PASS	AB=1.000;AC=14;AF=0.333;AN=42;BaseQRankSum=0.071;DP=506;FS=0.000;HRun=0;HaplotypeScore=103.1198;InbreedingCoeff=0.3948;MQ=32.37;MQ0=84;MQRankSum=-0.071;QD=0.66;ReadPosRankSum=0.498;VQSLOD=1.6803;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:13:0.90:0,1,3	./.	./.	./.	0/1:20,0:20:0.03:0,0,0	1/1:9,4:12:11.96:185,12,0	1/1:10,0:2:2.97:20,3,0	0/0:52,0:21:3.01:0,3,31	0/0:21,0:18:27.01:0,27,473	./.	0/1:22,0:20:0:0,0,0	0/0:13,0:9:0:0,0,0	0/1:21,0:13:0.04:0,0,0	0/1:12,0:8:0:0,0,0	1/1:16,0:12:0.01:0,0,0	0/1:17,0:15:0.02:0,0,0	0/1:17,0:9:0:0,0,0	./.	0/0:13,0:6:8.99:0,9,120	0/0:27,0:19:3.90:0,4,45	0/0:12,0:7:3.01:0,3,41	0/1:9,0:6:0:0,0,0	0/0:19,0:14:0:0,0,0	./.	0/0:39,0:24:0:0,0,0	0/1:27,0:19:0.09:0,0,0	0/0:23,0:14:3:0,3,25	./.
chr10	10311100	.	GATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAA	G	1881.23	PASS	AB=0.806;AC=22;AF=0.478;AN=46;BaseQRankSum=2.339;DP=496;FS=3.822;HRun=0;HaplotypeScore=232.3184;InbreedingCoeff=0.6111;MQ=32.33;MQ0=79;MQRankSum=-2.339;QD=9.55;ReadPosRankSum=2.747;VQSLOD=2.7409;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:13:5.31:0,5,167	./.	./.	./.	0/0:22,0:22:4.76:0,5,29	0/0:15,0:13:21.07:0,21,1119	0/0:10,0:4:8.99:0,9,280	0/0:54,0:21:30.10:0,30,720	0/0:26,0:19:33.11:0,33,2216	1/1:26,0:12:18.06:503,18,0	0/1:8,14:20:0:0,0,0	1/1:12,0:8:0.44:1,0,0	1/1:18,0:10:3.95:43,4,0	1/1:10,0:6:0.47:1,0,0	1/1:15,0:11:0.83:1,1,0	1/1:16,0:14:5.90:196,6,0	1/1:16,0:9:3.01:166,3,0	0/0:11,0:8:15.05:0,15,739	0/0:15,0:7:21.07:0,21,841	0/0:29,0:20:17.59:0,18,883	0/0:13,0:8:6.02:0,6,360	0/1:10,0:7:0:0,0,0	./.	./.	0/0:40,0:25:0:0,0,1	1/1:14,12:18:18.87:738,19,0	1/1:22,0:13:2.93:216,3,0	1/1:4,0:4:3.01:155,3,0
chr10	10311118	.	TA	T	429.85	PASS	AB=0.749;AC=24;AF=0.500;AN=48;BaseQRankSum=4.857;DP=446;FS=3.893;HRun=1;HaplotypeScore=109.3541;InbreedingCoeff=0.5830;MQ=31.49;MQ0=64;MQRankSum=-3.679;QD=3.01;ReadPosRankSum=0.932;VQSLOD=0.1072;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:9,7:11:2.52:0,3,48	1/1:3,1:4:0.94:1,1,0	./.	./.	0/0:24,0:24:2.73:0,3,23	0/0:20,0:18:26.65:0,27,285	0/0:11,0:8:18.06:0,18,254	0/0:48,0:17:45.14:0,45,659	0/0:30,0:24:48.15:0,48,713	1/1:8,11:12:14.56:247,15,0	./.	1/1:4,6:8:0.50:1,1,0	1/1:0,11:6:2.99:42,3,0	1/1:6,4:9:0.94:2,1,0	1/1:2,9:9:0.68:1,1,0	1/1:2,11:12:6.84:84,7,0	1/1:2,7:5:3.01:42,3,0	0/0:8,1:7:15.05:0,15,229	0/0:15,0:9:27.08:0,27,373	0/0:27,0:19:23.80:0,24,361	0/0:25,0:19:21.22:0,21,312	1/1:7,4:8:0.43:1,0,0	./.	0/1:5,1:5:0:0,0,0	0/0:39,0:23:0:0,0,0	1/1:16,0:12:10.23:67,10,0	0/1:7,9:10:0.43:38,0,0	1/1:4,3:6:3.01:42,3,0
chr10	10311128	.	GATAGATAGATAGATAA	G	586.66	PASS	AB=0.921;AC=24;AF=0.500;AN=48;BaseQRankSum=7.206;DP=436;FS=26.400;HRun=0;HaplotypeScore=161.9654;InbreedingCoeff=0.3624;MQ=33.53;MQ0=54;MQRankSum=-5.361;QD=3.24;ReadPosRankSum=-1.000;VQSLOD=0.9372;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:14,0:11:39.83:40,0,60	1/1:4,0:4:8.85:56,9,0	./.	./.	0/1:2,19:21:0.18:0,0,0	0/0:24,0:22:48.89:0,49,1153	0/0:12,0:10:23.90:0,24,303	0/0:44,0:15:29.85:0,30,260	0/0:30,0:28:69.96:0,70,1774	1/1:17,0:11:17.80:121,18,0	./.	1/1:7,0:5:7.14:51,7,0	0/0:9,0:6:1.77:0,2,5	1/1:9,0:8:12.95:83,13,0	1/1:9,0:7:2.01:29,2,0	1/1:10,0:10:6.58:41,7,0	0/0:9,0:7:3.01:0,3,38	0/1:8,0:6:3.98:4,0,90	0/0:13,0:9:17.56:0,18,515	0/0:28,0:23:2.64:0,3,677	0/1:26,0:22:42.98:43,0,412	1/1:11,0:7:11.75:71,12,0	./.	1/1:6,0:6:0.89:2,1,0	0/0:15,22:23:0.89:0,1,2	1/1:15,0:12:14.42:87,14,0	0/1:17,0:10:36.72:72,0,37	0/1:7,0:6:8.05:44,0,8
chr10	10311138	.	TA	T	1115.13	PASS	AB=0.706;AC=21;AF=0.404;AN=52;BaseQRankSum=7.658;DP=418;FS=27.573;HRun=1;HaplotypeScore=101.0198;InbreedingCoeff=0.2842;MQ=35.54;MQ0=48;MQRankSum=-5.943;QD=8.38;ReadPosRankSum=0.811;VQSLOD=-0.3899;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:6,4:9:45.44:82,0,45	1/1:1,3:4:9.03:102,9,0	0/0:19,1:1:3.01:0,3,40	0/0:11,0:1:3.01:0,3,44	1/1:21,0:20:0.86:1,1,0	0/0:28,0:26:41.70:0,42,504	0/0:13,0:13:33.04:0,33,459	0/0:46,0:21:60.20:0,60,865	0/0:32,0:30:69.23:0,69,1045	0/1:7,8:10:23.93:189,0,24	./.	1/1:3,3:4:6.99:95,7,0	0/0:5,0:5:2.49:0,2,6	1/1:2,6:7:13.41:162,13,0	1/1:5,2:6:2.66:60,3,0	0/1:8,3:11:29.50:58,0,29	0/0:6,1:6:3.01:0,3,38	0/1:4,1:5:19.24:19,0,168	0/0:18,0:11:33.11:0,33,475	0/0:25,0:21:44.97:0,45,670	0/0:26,0:24:32.46:0,32,487	1/1:4,4:5:12.03:131,12,0	./.	0/1:2,5:6:0:0,0,0	0/0:29,0:22:0:0,0,0	1/1:13,0:12:11.95:144,12,0	0/1:7,5:8:26.81:138,0,27	0/1:3,3:5:22.67:94,0,23
chr10	10311219	.	TGATA	T	2959.41	PASS	AB=0.878;AC=43;AF=0.860;AN=50;BaseQRankSum=-1.947;DP=616;FS=0.000;HRun=0;HaplotypeScore=93.9051;InbreedingCoeff=0.2260;MQ=37.70;MQ0=88;MQRankSum=-1.165;QD=5.87;ReadPosRankSum=0.602;VQSLOD=1.9675;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:18,8:19:53.85:164,0,54	1/1:10,0:8:9.03:129,9,0	./.	./.	1/1:25,0:22:4.99:51,5,0	1/1:33,0:27:11.99:110,12,0	0/0:18,0:7:2.99:0,3,26	./.	1/1:23,7:27:12.02:179,12,0	1/1:23,0:18:0.94:160,1,0	1/1:15,6:17:21.07:314,21,0	1/1:5,3:6:12.03:161,12,0	0/1:19,0:12:0:0,0,0	1/1:17,0:14:5.80:41,6,0	1/1:12,4:11:15.05:224,15,0	1/1:11,5:13:15.05:224,15,0	1/1:13,4:13:8.70:134,9,0	1/1:7,0:9:3:28,3,0	1/1:22,0:13:3:28,3,0	0/1:21,0:23:41.61:46,0,42	0/0:19,0:22:3.01:0,3,48	1/1:16,0:16:3:28,3,0	1/1:20,0:26:11.45:111,11,0	1/1:19,0:17:9.37:108,9,0	1/1:20,4:15:18.01:225,18,0	1/1:23,0:17:7.78:59,8,0	1/1:24,6:21:27.03:374,27,0	1/1:9,4:13:12.04:179,12,0
chr10	10311227	.	A	AGGT	257.23	PASS	AB=0.970;AC=11;AF=0.212;AN=52;BaseQRankSum=5.666;DP=615;FS=0.778;HRun=0;HaplotypeScore=102.0612;InbreedingCoeff=-0.0869;MQ=38.51;MQ0=85;MQRankSum=-4.123;QD=1.15;ReadPosRankSum=-7.301;VQSLOD=0.2858;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:21:35.92:0,36,479	0/0:9,0:7:15.05:0,15,240	./.	./.	0/1:29,0:26:34.92:35,0,398	0/1:35,0:24:17.70:18,0,436	0/1:16,0:8:1.37:1,0,97	0/0:43,0:15:45.15:0,45,791	0/0:28,0:25:36.10:0,36,521	0/1:32,1:20:56.67:57,0,558	0/0:23,0:20:48.14:0,48,675	0/1:11,0:9:5.88:6,0,151	0/1:18,3:14:99:133,0,140	0/1:19,0:14:3.43:3,0,208	0/0:19,0:14:24.07:0,24,315	0/0:18,0:15:36.06:0,36,494	0/0:18,0:14:14.04:0,14,198	1/1:15,0:10:2.04:6,2,0	0/1:21,0:11:6.15:6,0,412	0/1:20,2:20:99:119,0,606	0/0:22,0:21:9.50:0,10,154	0/0:18,0:15:18.05:0,18,292	0/0:32,0:25:20.39:0,20,241	0/0:22,0:19:10.92:0,11,459	0/0:25,0:17:42.13:0,42,610	0/0:23,0:15:31.70:0,32,588	0/0:29,0:21:38.66:0,39,514	0/0:12,0:12:30.09:0,30,442
chr10	10311550	.	A	AT	13640.95	PASS	AB=1.000;AC=35;AF=0.625;AN=56;BaseQRankSum=1.955;DP=702;FS=2.550;HRun=7;HaplotypeScore=96.5812;InbreedingCoeff=0.9234;MQ=77.13;MQ0=0;MQRankSum=-1.738;QD=29.46;ReadPosRankSum=4.947;VQSLOD=4.6688;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,43:47:99:1377,114,0	1/1:2,13:15:36.11:435,36,0	0/1:22,0:23:32.74:33,0,272	0/0:19,0:19:23.04:0,23,281	0/0:31,0:31:87.13:0,87,840	0/0:25,0:25:75.10:0,75,718	0/0:28,0:28:78.12:0,78,753	0/0:34,0:34:90.12:0,90,860	0/0:21,0:21:54.06:0,54,515	1/1:0,29:29:84.26:1014,84,0	1/1:1,18:19:51.16:616,51,0	1/1:4,20:24:51.16:616,51,0	1/1:2,19:21:54.17:652,54,0	1/1:1,24:25:69.21:834,69,0	1/1:3,24:27:69.21:833,69,0	1/1:2,15:16:42.13:507,42,0	1/1:1,40:41:99:1341,111,0	1/1:1,19:20:54.17:652,54,0	0/0:25,0:25:63.09:0,63,607	0/0:13,0:13:39.06:0,39,377	0/0:22,0:22:51.07:0,51,492	1/1:3,22:25:60.18:725,60,0	1/1:3,24:27:72.21:858,72,0	1/1:0,22:22:63.19:761,63,0	0/0:21,0:21:63.08:0,63,601	1/1:2,25:27:78.24:937,78,0	1/1:9,29:38:71.98:870,72,0	1/1:0,16:16:48.15:580,48,0
chr10	10314528	.	A	AACACAC	4380.99	PASS	AB=0.824;AC=46;AF=0.885;AN=52;BaseQRankSum=-3.636;DP=642;FS=0.000;HRun=0;HaplotypeScore=150.2602;InbreedingCoeff=0.2842;MQ=57.73;MQ0=17;MQRankSum=-0.777;QD=8.33;ReadPosRankSum=-1.665;VQSLOD=3.0770;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:41:15.05:304,15,0	1/1:5,0:5:3.01:42,3,0	./.	./.	0/0:7,0:10:3.48:0,3,30	1/1:12,0:12:8.82:140,9,0	1/1:23,0:22:8.49:85,8,0	1/1:24,0:24:10.03:57,10,0	0/1:23,0:23:3.99:46,0,4	1/1:20,0:19:22.14:354,22,0	1/1:18,0:18:6.02:129,6,0	1/1:18,5:24:7.26:138,7,0	1/1:18,0:17:18.50:272,19,0	1/1:10,0:16:3.01:38,3,0	1/1:16,0:24:6.02:90,6,0	1/1:19,6:30:11.78:283,12,0	1/1:14,9:25:9.03:243,9,0	0/1:10,9:22:5.88:347,0,6	1/1:18,0:18:8.06:90,8,0	1/1:9,0:9:3.01:45,3,0	1/1:42,0:42:34.41:519,34,0	1/1:11,0:14:5.12:117,5,0	1/1:6,7:14:3.01:95,3,0	1/1:29,13:49:8.10:226,8,0	0/0:13,0:24:21.53:0,22,279	1/1:9,0:15:16.22:276,16,0	1/1:16,0:23:5.12:89,5,0	1/1:13,1:14:19.31:353,19,0
chr10	10314874	.	A	AT	9351.47	PASS	AB=0.533;AC=33;AF=0.589;AN=56;BaseQRankSum=-12.215;DP=519;FS=0.000;HRun=8;HaplotypeScore=49.4400;InbreedingCoeff=0.9292;MQ=78.78;MQ0=0;MQRankSum=-3.442;QD=29.13;ReadPosRankSum=5.270;VQSLOD=4.2907;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,29:31:82.13:937,82,0	0/1:1,7:8:9.41:155,0,9	0/0:25,0:22:41.85:0,42,366	0/0:10,0:10:18.44:0,18,166	0/0:18,0:17:51.03:0,51,467	0/0:21,0:21:60.03:0,60,549	0/0:17,0:17:38.96:0,39,345	0/0:19,0:19:47.98:0,48,436	0/0:16,0:16:46.55:0,47,406	1/1:4,22:26:63.19:727,63,0	1/1:1,20:21:57.17:658,57,0	1/1:4,16:20:51.15:588,51,0	1/1:4,15:19:48.14:551,48,0	1/1:2,20:22:57.17:658,57,0	1/1:2,10:12:27.08:312,27,0	1/1:2,8:10:18.05:208,18,0	1/1:2,28:29:81.24:935,81,0	1/1:0,19:19:48.14:554,48,0	0/0:20,0:20:50.97:0,51,455	0/0:16,0:16:17.18:0,17,303	0/0:12,0:12:36.02:0,36,329	1/1:0,8:8:21.06:242,21,0	1/1:3,21:24:60.18:692,60,0	1/1:2,10:12:30.09:346,30,0	0/0:24,0:24:65.76:0,66,599	1/1:1,26:27:78.22:889,78,0	1/1:3,18:21:48.14:554,48,0	1/1:0,11:11:30.09:346,30,0
chr10	10316558	.	AC	A	528.98	PASS	AB=0.805;AC=7;AF=0.125;AN=56;BaseQRankSum=9.030;DP=446;FS=127.757;HRun=2;HaplotypeScore=84.8329;InbreedingCoeff=-0.1319;MQ=70.17;MQ0=0;MQRankSum=-8.416;QD=4.48;ReadPosRankSum=1.342;VQSLOD=-0.2997;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:35.93:0,36,417	0/0:10,0:10:27.05:0,27,379	0/0:14,0:10:39.13:0,39,575	0/0:18,0:14:51.11:0,51,697	0/0:12,0:12:5.97:0,6,65	0/0:8,0:8:18.53:0,19,260	0/0:20,1:21:24.69:0,25,429	0/1:14,16:30:99:527,0,533	0/1:12,2:14:0.35:0,0,297	0/0:21,0:21:60.20:0,60,890	0/0:20,0:20:17.92:0,18,245	0/0:16,2:18:13.06:0,13,352	0/0:16,2:18:5.91:0,6,398	0/1:9,4:13:1.80:2,0,255	0/1:14,6:20:24.58:25,0,212	0/0:11,1:12:17.08:0,17,328	0/1:14,3:17:4.04:4,0,260	0/0:11,0:11:33.11:0,33,494	0/1:9,3:12:69.74:70,0,347	0/0:18,0:18:36.11:0,36,519	0/0:16,1:17:18.63:0,19,370	0/0:19,0:19:27.05:0,27,377	0/0:15,0:15:20.46:0,20,288	0/0:7,0:7:6.02:0,6,85	0/0:12,0:12:30.06:0,30,424	0/0:29,2:31:17.75:0,18,1193	0/1:11,1:12:11.75:12,0,331	0/0:10,0:10:30.10:0,30,449
chr10	10316802	.	G	GA	2022.84	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=1.449;DP=666;FS=3.116;HRun=10;HaplotypeScore=117.1826;InbreedingCoeff=0.9737;MQ=68.63;MQ0=0;MQRankSum=-7.210;QD=18.91;ReadPosRankSum=-1.566;VQSLOD=2.6615;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:55:99:0,130,1060	0/0:11,0:11:29.94:0,30,243	0/0:23,0:19:5.96:0,6,108	0/0:22,0:17:22.82:0,23,239	1/1:6,2:18:38.54:223,39,0	1/1:4,13:18:44.94:459,45,0	1/1:6,19:26:62.99:652,63,0	0/0:39,0:39:71.66:0,72,590	1/1:6,16:23:59.96:606,60,0	0/0:25,0:25:68.89:0,69,566	0/0:18,0:18:47.91:0,48,392	0/0:22,0:22:58.16:0,58,468	0/0:19,1:21:21.02:0,21,368	0/0:18,0:18:50.93:0,51,418	0/0:20,0:21:46.91:0,47,367	0/0:25,1:26:39.96:0,40,534	0/0:27,0:27:71.90:0,72,591	0/0:31,0:32:91.88:0,92,739	0/0:20,0:20:44.88:0,45,363	0/0:19,0:19:50.94:0,51,418	0/0:12,0:12:32.31:0,32,244	0/0:24,0:24:59.91:0,60,491	0/0:22,0:22:38.85:0,39,320	0/0:26,0:26:59.91:0,60,492	1/1:10,0:22:45.90:259,46,0	0/0:27,1:28:30.01:0,30,442	0/0:27,0:27:59.89:0,60,493	0/0:17,0:17:29.86:0,30,240
chr10	10316827	.	GA	G	11113.40	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-4.615;DP=601;FS=6.639;HRun=10;HaplotypeScore=80.0545;InbreedingCoeff=0.9536;MQ=66.70;MQ0=0;MQRankSum=-2.863;QD=19.60;ReadPosRankSum=3.647;VQSLOD=5.7559;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,46:53:71.49:1010,71,0	1/1:1,9:10:26.99:234,27,0	0/0:17,0:15:26.51:0,27,262	0/0:16,0:11:17:0,17,204	1/1:5,0:18:24.43:72,24,0	1/1:3,12:15:32.99:286,33,0	1/1:6,20:26:53.97:469,54,0	1/1:4,32:36:95.96:830,96,0	1/1:3,19:22:50.95:443,51,0	1/1:3,21:24:62.94:540,63,0	1/1:2,16:18:38.97:338,39,0	1/1:4,19:23:30.68:442,31,0	1/1:2,18:21:47.02:397,47,0	1/1:2,16:18:47.21:398,47,0	1/1:1,19:20:50.99:443,51,0	1/1:2,21:23:59.98:521,60,0	1/1:0,25:25:74.99:651,75,0	1/1:5,22:27:49.16:553,49,0	1/1:6,12:18:8.78:305,9,0	1/1:4,13:17:35.98:312,36,0	1/1:0,14:14:41.99:365,42,0	1/1:5,18:23:26.77:458,27,0	1/1:3,17:20:38.90:338,39,0	1/1:4,15:19:44.99:391,45,0	1/1:2,0:11:16.76:48,17,0	1/1:8,18:26:20.82:410,21,0	1/1:3,24:27:62.98:547,63,0	1/1:0,13:13:35.99:313,36,0
chr10	10317637	.	AACACACAC	A	6159.06	PASS	AB=0.750;AC=37;AF=0.712;AN=52;BaseQRankSum=6.971;DP=562;FS=5.795;HRun=0;HaplotypeScore=160.1444;InbreedingCoeff=0.7126;MQ=60.65;MQ0=16;MQRankSum=-6.046;QD=16.97;ReadPosRankSum=2.594;VQSLOD=3.5673;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:32,10:42:14.92:261,15,0	1/1:2,6:8:9.03:225,9,0	./.	./.	1/1:10,0:23:23.67:395,24,0	0/0:13,0:14:21.07:0,21,755	0/0:18,0:21:27.09:0,27,914	0/0:18,0:18:19.88:0,20,518	0/0:19,0:19:27.56:0,28,940	1/1:19,11:30:26.71:496,27,0	1/1:7,4:11:5.92:39,6,0	1/1:7,1:8:3.01:75,3,0	1/1:7,5:13:12.30:282,12,0	1/1:16,4:21:11.87:281,12,0	1/1:10,5:16:15.05:356,15,0	1/1:9,6:15:15.05:375,15,0	1/1:24,6:31:17.88:421,18,0	1/1:10,1:11:3.01:75,3,0	0/0:21,0:17:11.16:0,11,298	0/0:16,0:15:3.01:0,3,97	0/0:20,0:19:9.01:0,9,298	0/1:12,6:18:8.27:213,0,8	1/1:6,4:11:9.03:206,9,0	1/1:18,4:22:2.75:75,3,0	1/1:7,0:21:30.10:559,30,0	1/1:5,6:11:12.01:248,12,0	1/1:20,16:37:54.18:1314,54,0	1/1:6,3:11:12.04:262,12,0
chr10	10318397	.	C	CA	2102.54	PASS	AB=0.843;AC=30;AF=0.556;AN=54;BaseQRankSum=5.471;DP=452;FS=6.234;HRun=1;HaplotypeScore=101.8687;InbreedingCoeff=-0.2994;MQ=37.17;MQ0=57;MQRankSum=-3.226;QD=5.89;ReadPosRankSum=2.344;VQSLOD=0.7695;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:9,1:10:30.08:41,0,30	1/1:3,1:4:3:27,3,0	0/0:35,0:4:9.03:0,9,126	0/0:46,0:14:17.05:0,17,304	1/1:4,3:5:3.01:45,3,0	1/1:9,2:9:0.32:86,0,0	0/1:20,6:23:99:121,0,121	1/1:9,7:15:18.21:331,18,0	0/1:5,5:11:1.49:228,0,1	0/1:16,0:13:30.51:31,0,52	0/0:4,0:4:5.49:0,5,24	0/1:16,1:13:27.12:33,0,27	0/1:9,5:10:22.28:141,0,22	0/1:18,2:15:37.56:66,0,38	0/1:13,5:14:26.13:110,0,26	0/1:9,8:18:9.90:209,0,10	0/1:14,1:13:43.74:44,0,59	0/1:14,3:15:91.18:91,0,114	1/1:10,6:11:8.54:211,9,0	1/1:5,1:4:3.01:41,3,0	1/1:24,4:26:2.29:44,2,0	0/0:8,0:5:2.74:0,3,12	0/1:7,1:7:32.76:33,0,35	0/1:33,6:33:97.24:106,0,97	./.	0/1:12,4:10:3.36:177,0,3	0/1:13,2:14:35.02:35,0,52	0/1:6,1:7:1.59:2,0,52
chr10	10318398	.	C	CA	863.63	PASS	AB=0.949;AC=40;AF=0.714;AN=56;BaseQRankSum=0.801;DP=451;FS=3.083;HRun=0;HaplotypeScore=108.6723;InbreedingCoeff=0.2104;MQ=36.91;MQ0=57;MQRankSum=1.587;QD=2.59;ReadPosRankSum=-0.571;VQSLOD=3.0806;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:8,2:11:10.19:38,10,0	1/1:4,0:4:5.81:34,6,0	0/0:35,0:4:9.03:0,9,125	0/0:44,0:12:15.83:0,16,302	0/0:8,0:6:0.47:0,0,1	1/1:10,1:9:13.64:83,14,0	0/1:24,0:21:17.61:18,0,18	1/1:12,2:13:13.52:118,14,0	0/1:10,0:11:1.30:30,0,1	1/1:15,0:12:4.67:55,5,0	1/1:4,0:4:4.44:14,4,0	0/1:14,2:12:6.98:14,0,7	0/1:14,0:10:11.50:12,0,38	0/1:20,0:15:4.15:4,0,17	0/1:17,1:14:6.30:6,0,40	1/1:16,0:18:14.51:93,15,0	1/1:16,1:15:15.10:57,15,0	1/1:15,0:14:3.96:68,4,0	1/1:15,1:11:8.57:48,9,0	1/1:6,0:4:1.82:5,2,0	0/0:19,11:27:3.30:0,3,19	1/1:9,0:6:2.22:7,2,0	0/1:8,0:7:1.46:1,0,33	1/1:38,1:33:19.05:82,19,0	1/1:2,0:2:0.89:2,1,0	1/1:14,2:10:11.50:66,12,0	0/1:13,3:15:12.49:108,0,12	1/1:7,0:8:4.02:52,4,0
chr10	10318414	.	CCAACAACAA	C	1205.23	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=-1.861;DP=556;FS=4.767;HRun=0;HaplotypeScore=170.4305;InbreedingCoeff=0.7619;MQ=42.52;MQ0=57;MQRankSum=0.944;QD=12.43;ReadPosRankSum=-3.889;VQSLOD=1.0467;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:25:53.41:0,53,830	0/0:5,0:5:9:0,9,203	0/0:41,0:12:24.97:0,25,726	0/0:43,0:14:33.11:0,33,1046	0/0:8,0:7:18.64:0,19,484	0/0:27,0:25:63.57:0,64,1087	0/0:23,0:20:45.02:0,45,1305	1/1:12,0:11:6.75:305,7,0	0/0:9,0:9:15.03:0,15,394	0/0:24,0:23:51.14:0,51,1179	0/0:12,0:11:27:0,27,441	0/0:21,0:18:39.07:0,39,937	0/0:13,0:9:18.05:0,18,471	0/0:22,0:17:43.49:0,43,1099	0/1:20,0:15:54.63:55,0,549	0/0:20,0:19:39.12:0,39,1137	0/0:20,0:19:51.03:0,51,1307	0/0:16,0:15:42.05:0,42,1211	1/1:9,14:19:35.76:576,36,0	1/1:4,5:7:4.02:55,4,0	1/1:33,0:30:9.84:363,10,0	0/0:16,0:13:36.09:0,36,756	0/0:15,0:13:36.04:0,36,641	0/0:39,0:36:87.14:0,87,2232	0/0:8,0:8:21.07:0,21,591	0/0:20,0:16:38.66:0,39,506	0/0:18,0:17:42.08:0,42,1072	0/0:13,0:13:39.08:0,39,1023
chr10	10319075	.	AGT	A	5824.21	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=6.049;DP=926;FS=9.337;HRun=0;HaplotypeScore=196.7933;InbreedingCoeff=0.9730;MQ=51.55;MQ0=14;MQRankSum=0.759;QD=14.24;ReadPosRankSum=7.993;VQSLOD=3.3533;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:20,5:23:15.03:187,15,0	1/1:9,4:11:11.28:133,11,0	0/0:56,0:18:51.12:0,51,706	0/0:57,0:15:33.09:0,33,505	0/0:39,0:39:75.26:0,75,1223	0/0:36,0:34:63.20:0,63,1013	0/0:37,0:35:81.18:0,81,1262	0/0:60,0:58:99:0,120,1820	0/0:54,0:51:99:0,111,1765	1/1:24,3:25:20.80:410,21,0	1/1:10,1:11:12.04:151,12,0	1/1:26,7:27:22.93:302,23,0	1/1:24,8:24:36.04:427,36,0	1/1:25,8:27:51.16:634,51,0	1/1:30,11:33:42.08:504,42,0	1/1:21,7:25:36.10:452,36,0	1/1:16,1:15:29.60:281,30,0	1/1:10,0:11:25.08:224,25,0	0/0:21,0:20:51.17:0,51,818	0/0:39,0:39:74.92:0,75,1126	0/0:82,1:81:99:0,202,3261	1/1:19,1:20:20.81:263,21,0	1/1:14,0:13:20.98:243,21,0	1/1:21,11:28:39.59:475,40,0	0/0:30,1:30:40.39:0,40,1171	1/1:23,9:25:66.14:754,66,0	1/1:20,5:23:25.79:260,26,0	1/1:10,0:12:6.99:122,7,0
chr10	10319088	.	GTC	G	1626.52	PASS	AB=0.976;AC=30;AF=0.536;AN=56;BaseQRankSum=10.104;DP=889;FS=23.037;HRun=0;HaplotypeScore=213.4146;InbreedingCoeff=0.7261;MQ=50.78;MQ0=8;MQRankSum=1.413;QD=4.25;ReadPosRankSum=0.793;VQSLOD=1.5294;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:23,1:21:2.23:55,0,2	1/1:9,0:7:11.76:78,12,0	0/0:70,0:26:53.83:0,54,627	0/0:61,0:24:34.60:0,35,552	0/0:42,0:42:84.15:0,84,1317	0/0:35,0:33:63.15:0,63,1096	0/0:35,0:32:75.13:0,75,1428	0/0:48,0:42:99:0,102,1770	0/0:54,0:51:99:0,108,1911	1/1:15,0:13:32.83:128,33,0	0/1:7,0:7:5.09:37,0,5	1/1:29,2:25:20.62:101,21,0	1/1:27,1:19:32.06:153,32,0	1/1:35,0:26:47.48:219,47,0	1/1:43,0:35:20.93:147,21,0	1/1:27,1:24:34.84:158,35,0	1/1:19,0:16:5.72:74,6,0	0/1:16,1:14:37.98:76,0,38	0/0:21,0:19:53.02:0,53,835	0/0:32,0:32:53.16:0,53,1139	0/0:80,0:75:99:0,201,3665	1/1:18,0:18:19.47:92,19,0	1/1:11,1:11:18.11:83,18,0	1/1:34,0:28:19.92:141,20,0	0/0:27,0:27:61.96:0,62,1258	1/1:30,0:24:27:200,27,0	1/1:19,1:19:9.63:78,10,0	0/1:12,0:12:22.50:23,0,29
chr10	10319096	.	C	CTG	16515.31	PASS	AB=1.000;AC=47;AF=0.839;AN=56;BaseQRankSum=-4.131;DP=888;FS=34.137;HRun=0;HaplotypeScore=165.3958;InbreedingCoeff=0.8018;MQ=49.59;MQ0=10;MQRankSum=4.745;QD=23.43;ReadPosRankSum=0.523;VQSLOD=2.9713;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:23,3:22:20.95:343,21,0	1/1:6,2:6:6.01:76,6,0	0/0:56,0:22:43.90:0,44,510	0/0:63,0:21:34.41:0,34,426	0/0:37,0:37:66.07:0,66,866	1/1:1,35:34:54.18:935,54,0	1/1:7,29:32:54.18:935,54,0	1/1:11,32:35:63.96:1059,64,0	1/1:3,51:51:90.31:1557,90,0	0/1:14,0:12:12.60:132,0,13	1/1:8,1:9:12.03:180,12,0	1/1:29,5:28:39:567,39,0	1/1:22,8:21:36.05:554,36,0	1/1:29,8:28:48.10:760,48,0	1/1:39,8:39:51.11:747,51,0	1/1:23,7:26:29.71:475,30,0	1/1:17,4:18:38.77:505,39,0	1/1:11,6:14:4.88:468,5,0	1/1:3,13:14:36.12:614,36,0	1/1:2,27:29:54.16:930,54,0	1/1:31,51:77:99:2816,173,0	1/1:20,1:21:23.83:337,24,0	1/1:14,0:13:21.05:324,21,0	1/1:30,10:34:34.33:787,34,0	0/0:27,0:26:66.19:0,66,859	1/1:21,4:19:42.10:614,42,0	1/1:18,5:21:39.03:523,39,0	1/1:10,2:12:9.65:278,10,0
chr10	10319392	.	ATG	A	23203.14	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=17.208;DP=1207;FS=9.982;HRun=0;HaplotypeScore=230.4063;InbreedingCoeff=0.9965;MQ=58.91;MQ0=14;MQRankSum=3.614;QD=27.46;ReadPosRankSum=3.667;VQSLOD=4.6102;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:12,38:48:99:1308,105,0	1/1:2,10:10:21.07:272,21,0	0/0:48,1:30:53.47:0,53,818	0/0:39,0:23:36.12:0,36,570	0/0:41,0:41:99:0,114,1935	1/1:3,32:35:45.08:568,45,0	1/1:6,16:22:23.78:296,24,0	0/0:55,0:51:99:0,119,1990	1/1:15,46:59:71.89:890,72,0	1/1:7,58:64:99:2152,169,0	1/1:3,29:32:60.62:1030,61,0	1/1:7,44:50:99:1520,117,0	1/1:7,48:53:99:1638,126,0	1/1:4,45:49:99:1521,117,0	1/1:2,43:45:99:1366,105,0	1/1:6,35:40:65.70:1107,66,0	1/1:4,36:40:99:1427,111,0	1/1:4,24:27:15.47:768,15,0	0/0:18,0:15:42.13:0,42,683	0/0:50,0:50:99:0,129,2194	0/0:68,0:67:99:0,172,2795	1/1:5,37:42:93.01:1209,93,0	1/1:3,22:25:47.94:624,48,0	1/1:22,45:66:99:1662,135,0	0/0:40,1:41:60.31:0,60,1592	1/1:11,52:62:99:1956,153,0	1/1:5,36:40:96.31:1249,96,0	1/1:3,18:21:31.30:640,31,0
chr10	10319412	.	TTGTC	T	919.52	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=2.744;DP=1236;FS=15.005;HRun=0;HaplotypeScore=352.0083;InbreedingCoeff=0.7662;MQ=54.87;MQ0=43;MQRankSum=-4.352;QD=5.57;ReadPosRankSum=-6.961;VQSLOD=-0.0849;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:47:60.40:0,60,2390	0/0:15,0:13:33.11:0,33,794	0/0:52,0:14:0.63:0,1,185	0/1:39,0:6:0.62:1,0,136	0/0:41,0:41:99:0,117,2924	1/1:3,41:44:29.73:307,30,0	1/1:12,15:27:2.42:407,2,0	0/0:55,0:49:99:0,141,3191	1/1:10,45:54:26.89:336,27,0	0/0:64,0:64:99:0,181,4463	0/0:33,0:33:90.24:0,90,2216	0/0:46,0:45:99:0,123,3047	0/0:52,0:51:99:0,138,3342	0/0:51,0:51:99:0,129,3165	0/0:53,0:52:99:0,132,3183	0/0:42,0:42:99:0,108,2746	0/0:47,0:46:99:0,129,3195	0/0:29,0:28:69.16:0,69,1603	0/0:23,0:19:54.17:0,54,1266	0/0:47,0:47:99:0,126,3177	0/0:73,0:72:99:0,177,4223	0/0:44,0:44:99:0,102,2663	0/0:26,0:25:60.21:0,60,1485	0/0:64,0:64:99:0,147,3713	0/0:44,0:44:99:0,126,3096	0/0:57,0:56:99:0,144,3534	0/0:43,0:43:99:0,114,2839	0/0:20,0:20:57.20:0,57,1536
chr10	10319538	.	GGT	G	924.14	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=10.819;DP=998;FS=10.010;HRun=0;HaplotypeScore=168.7141;InbreedingCoeff=0.9134;MQ=57.34;MQ0=9;MQRankSum=-2.635;QD=6.46;ReadPosRankSum=-2.823;VQSLOD=2.3170;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:96.26:0,96,1498	0/0:15,0:15:33.11:0,33,557	0/0:36,0:24:45.13:0,45,677	0/0:51,0:31:50.52:0,51,732	0/0:38,0:38:90.29:0,90,1469	0/0:41,0:41:84.24:0,84,1226	0/0:29,0:29:66.18:0,66,993	1/1:51,0:46:78.97:668,79,0	0/0:44,0:44:99:0,102,1600	0/0:51,0:51:99:0,132,2171	0/0:29,0:29:72.25:0,72,1195	0/0:35,1:36:60.74:0,61,1543	0/0:47,0:48:99:0,135,2155	0/0:30,0:30:81.26:0,81,1300	0/0:43,0:43:99:0,117,1880	0/0:34,1:35:57.68:0,58,1452	0/0:32,1:33:55.11:0,55,1298	0/0:22,0:23:44.48:0,44,762	1/1:24,0:20:41.62:339,42,0	1/1:37,0:35:5.78:37,6,0	1/1:31,0:27:2.82:24,3,0	0/0:36,1:37:66.74:0,67,1641	0/0:36,0:36:93.30:0,93,1501	0/0:37,0:37:76.09:0,76,1202	0/0:34,0:35:90.29:0,90,1475	0/0:47,0:47:99:0,109,1974	0/0:29,0:29:84.29:0,84,1404	0/0:7,0:7:21.07:0,21,347
chr10	10319545	.	GTGTGTC	G	2780.02	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=10.411;DP=974;FS=7.639;HRun=0;HaplotypeScore=226.5912;InbreedingCoeff=0.9642;MQ=56.89;MQ0=10;MQRankSum=-2.844;QD=20.44;ReadPosRankSum=-4.883;VQSLOD=1.6003;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:41:82.73:0,83,3144	0/0:12,0:12:33.11:0,33,1137	0/0:37,0:21:49.39:0,49,1237	0/0:50,0:28:68.49:0,68,1375	0/0:34,0:34:96.29:0,96,3119	0/0:36,0:36:87.20:0,87,2501	0/0:28,0:28:78.66:0,79,1936	1/1:7,38:40:99:1710,99,0	0/0:44,0:44:99:0,108,3363	0/0:50,0:50:99:0,144,4436	0/0:30,0:30:84.29:0,84,2619	0/0:38,0:38:99:0,106,3237	0/0:47,0:47:99:0,138,4148	0/0:30,0:30:87.28:0,87,2773	0/0:43,0:43:99:0,123,3765	0/0:34,0:34:99:0,99,3081	0/0:35,0:35:79.24:0,79,2678	0/0:24,0:25:31.14:0,31,1637	1/1:3,20:17:48.13:975,48,0	1/1:1,37:36:8.74:178,9,0	1/1:17,13:26:8.94:68,9,0	0/0:39,0:39:99:0,114,3598	0/0:33,0:33:99:0,99,3052	0/0:36,0:35:81.28:0,81,2618	0/0:33,0:35:93.31:0,93,2970	0/0:43,0:43:63.70:0,64,3882	0/0:30,0:30:90.31:0,90,3006	0/0:7,0:7:21.07:0,21,745
chr10	10320946	.	G	GC	3155.69	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-7.928;DP=742;FS=1.346;HRun=6;HaplotypeScore=109.6520;InbreedingCoeff=0.9828;MQ=79.77;MQ0=0;MQRankSum=-1.977;QD=30.34;ReadPosRankSum=-2.652;VQSLOD=1.9656;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,117,1187	0/0:17,0:17:42.09:0,42,428	0/0:29,0:26:61.23:0,61,621	0/0:28,0:27:49.56:0,50,470	0/0:35,0:35:99:0,102,1040	0/0:19,0:19:54.10:0,54,544	0/0:26,0:26:75.17:0,75,765	1/1:2,21:23:63.20:793,63,0	0/0:27,0:27:72.15:0,72,735	0/0:31,0:31:84.16:0,84,844	0/0:19,0:19:51.10:0,51,514	0/0:26,0:26:78.14:0,78,776	0/0:28,0:28:81.18:0,81,826	0/0:26,0:26:69.14:0,69,697	0/0:36,0:36:99:0,102,1034	0/0:22,0:22:66.14:0,66,668	0/0:40,0:39:99:0,117,1186	0/0:21,0:21:60.13:0,60,610	1/1:6,16:21:20.93:561,21,0	1/1:2,21:23:63.20:793,63,0	1/1:2,34:36:93.30:1170,93,0	0/0:35,0:35:99:0,99,1003	0/0:27,0:27:75.14:0,75,752	0/0:30,0:30:72.14:0,72,728	0/0:22,0:22:63.12:0,63,635	0/0:18,0:18:51.10:0,51,515	0/0:26,0:26:72.16:0,72,734	0/0:3,0:3:9.02:0,9,92
chr10	10321438	.	T	TTCTCC	890.66	PASS	AC=6;AF=0.111;AN=54;BaseQRankSum=-2.203;DP=282;FS=0.000;HRun=0;HaplotypeScore=55.4108;InbreedingCoeff=0.8538;MQ=106.55;MQ0=1;MQRankSum=-3.346;QD=37.11;ReadPosRankSum=-0.966;VQSLOD=3.0646;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:30.09:0,30,542	0/0:5,0:5:12.04:0,12,235	0/0:16,0:16:25.06:0,25,469	0/0:36,0:33:43.93:0,44,733	0/0:12,0:12:36.11:0,36,672	1/1:1,9:10:21.07:619,21,0	1/1:7,0:7:15.04:312,15,0	0/0:10,0:10:15.04:0,15,232	1/1:3,4:7:3.01:88,3,0	0/0:5,0:5:9.03:0,9,177	0/0:11,0:11:21.07:0,21,412	0/0:6,0:6:15.05:0,15,294	0/0:7,0:7:21.06:0,21,379	0/0:10,0:10:27.09:0,27,507	0/0:7,0:7:18.06:0,18,353	0/0:10,0:10:24.08:0,24,470	0/0:13,0:13:33.11:0,33,638	0/0:7,0:7:18.06:0,18,353	0/0:9,0:9:12.04:0,12,235	0/0:14,0:14:21.07:0,21,404	0/0:12,0:12:30.10:0,30,580	0/0:12,0:12:24.07:0,24,437	0/0:8,0:8:21.07:0,21,403	0/0:11,0:11:18.06:0,18,353	0/0:6,0:6:18.05:0,18,321	0/0:9,0:9:21.06:0,21,373	0/0:7,0:7:21.07:0,21,412	./.
chr10	10322533	.	TACACACACACAC	T	9576.52	PASS	AB=0.705;AC=39;AF=0.722;AN=54;BaseQRankSum=-0.625;DP=737;FS=9.073;HRun=0;HaplotypeScore=252.3707;InbreedingCoeff=0.4478;MQ=52.11;MQ0=21;MQRankSum=-3.203;QD=18.52;ReadPosRankSum=1.431;VQSLOD=2.4854;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:12,12:26:13.97:106,14,0	0/1:5,6:12:11.37:236,0,11	0/0:49,0:12:3.01:0,3,116	./.	0/0:13,0:25:19.18:0,19,273	1/1:5,14:22:24.01:476,24,0	1/1:21,5:30:16.78:262,17,0	0/0:15,0:19:16.34:0,16,191	1/1:4,16:20:30.10:539,30,0	1/1:18,7:26:24.14:759,24,0	1/1:9,9:18:8.94:88,9,0	1/1:12,12:25:17.99:473,18,0	1/1:10,16:26:29.57:654,30,0	1/1:17,14:31:41.99:813,42,0	1/1:5,21:26:35.78:599,36,0	1/1:10,19:29:42:976,42,0	1/1:14,10:23:11.57:413,12,0	0/1:9,9:17:80.25:600,0,80	0/1:18,0:19:13.75:78,0,14	0/1:10,2:20:33.49:60,0,33	0/0:36,1:51:3:0,3,28	1/1:12,10:23:16.17:224,16,0	1/1:10,8:20:13.29:152,13,0	0/1:18,13:33:6.96:133,0,7	0/0:8,0:19:23.11:0,23,195	1/1:12,19:31:18.61:859,19,0	1/1:7,10:21:24.08:662,24,0	1/1:6,8:13:12.04:414,12,0
chr10	10328771	.	A	AT	1799.52	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-9.916;DP=516;FS=0.493;HRun=9;HaplotypeScore=50.9584;InbreedingCoeff=0.9206;MQ=77.74;MQ0=0;MQRankSum=-0.596;QD=22.78;ReadPosRankSum=-1.071;VQSLOD=3.8920;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:68.96:0,69,593	0/0:5,0:5:15:0,15,130	0/0:15,0:15:0.09:0,0,220	0/0:12,0:10:22.42:0,22,176	0/0:32,0:32:86.91:0,87,744	0/0:22,0:22:56.97:0,57,491	0/0:18,0:18:47.99:0,48,417	1/1:7,19:26:34.70:563,35,0	0/0:20,0:20:53.98:0,54,469	0/0:24,0:24:59.97:0,60,521	0/0:20,1:21:17.79:0,18,383	0/0:8,0:8:17.99:0,18,156	0/0:15,0:15:38.96:0,39,334	0/0:14,0:14:41.99:0,42,364	0/0:18,0:18:47.99:0,48,417	0/0:20,0:20:53.95:0,54,461	0/0:22,0:22:62.93:0,63,539	0/0:25,0:25:71.90:0,72,608	1/1:2,17:19:28.16:525,28,0	1/1:4,23:27:37.11:638,37,0	1/1:0,7:7:21.06:232,21,0	0/0:10,0:10:26.99:0,27,234	0/0:13,0:13:35.87:0,36,312	0/0:17,0:17:47.99:0,48,416	0/0:17,0:17:41.97:0,42,365	0/0:24,0:24:65.98:0,66,573	0/0:23,0:22:62.98:0,63,546	0/0:16,0:16:47.98:0,48,414
chr10	10329049	.	C	CG	2451.60	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-9.557;DP=564;FS=7.088;HRun=4;HaplotypeScore=57.7994;InbreedingCoeff=0.9967;MQ=87.99;MQ0=0;MQRankSum=-0.304;QD=29.54;ReadPosRankSum=-1.919;VQSLOD=2.6743;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:78.11:0,78,843	0/0:10,0:10:24.07:0,24,272	0/0:22,0:21:50.21:0,50,446	0/0:24,0:24:17.78:0,18,392	0/0:32,0:32:93.23:0,93,1027	0/0:18,0:18:48.13:0,48,544	0/0:14,0:14:36.10:0,36,408	1/1:4,15:19:45.03:526,45,0	0/0:13,0:13:36.07:0,36,389	0/0:18,0:18:45.12:0,45,503	0/0:16,0:16:48.14:0,48,544	0/0:18,0:18:54.15:0,54,611	0/0:17,0:17:48.11:0,48,524	0/0:18,0:18:48.13:0,48,536	0/0:16,0:16:42.12:0,42,476	0/0:19,0:19:57.12:0,57,618	0/0:30,0:30:81.22:0,81,908	0/0:25,0:25:69.14:0,69,749	1/1:1,16:17:48.15:642,48,0	1/1:1,17:18:47.93:584,48,0	1/1:1,28:29:63.21:861,63,0	0/0:23,0:23:65.86:0,66,724	0/0:13,0:13:39.09:0,39,431	0/0:27,0:27:78.16:0,78,859	0/0:12,0:12:30.07:0,30,331	0/0:31,0:31:90.22:0,90,994	0/0:26,0:26:75.21:0,75,848	0/0:11,0:11:33.09:0,33,374
chr10	10329510	.	TC	T	1329.90	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=11.119;DP=620;FS=7.797;HRun=2;HaplotypeScore=81.0425;InbreedingCoeff=0.9987;MQ=86.09;MQ0=0;MQRankSum=-8.745;QD=19.00;ReadPosRankSum=-3.046;VQSLOD=2.4520;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:90.29:0,90,1325	0/0:10,0:10:30.10:0,30,449	0/0:16,0:16:47.64:0,48,669	0/0:27,0:27:81.18:0,81,1093	0/0:38,0:38:99:0,108,1607	0/0:24,0:24:72.23:0,72,1060	0/0:22,0:22:66.22:0,66,989	1/1:6,14:20:42.11:505,42,0	0/0:26,0:26:75.25:0,75,1107	0/0:22,0:22:66.22:0,66,989	0/0:12,0:12:36.12:0,36,539	0/0:19,0:19:57.19:0,57,854	0/0:26,0:26:78.25:0,78,1144	0/0:20,0:20:57.17:0,57,815	0/0:32,0:32:93.31:0,93,1391	0/0:21,0:21:63.20:0,63,924	0/0:20,0:20:60.20:0,60,899	0/0:27,0:27:81.27:0,81,1207	1/1:3,11:14:32.67:376,33,0	1/1:8,10:18:38.57:379,39,0	1/1:10,8:18:25.52:230,26,0	0/0:23,0:23:69.22:0,69,1013	0/0:15,0:15:45.15:0,45,674	0/0:20,0:20:60.20:0,60,898	0/0:17,0:17:48.15:0,48,700	0/0:42,0:42:99:0,123,1826	0/0:32,0:32:96.33:0,96,1437	0/0:8,0:8:24.08:0,24,360
chr10	10329514	.	CCGCAGGCAGAG	C	4171.26	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=10.892;DP=602;FS=5.582;HRun=0;HaplotypeScore=196.4549;InbreedingCoeff=0.9986;MQ=86.56;MQ0=0;MQRankSum=-9.497;QD=90.68;ReadPosRankSum=-2.046;VQSLOD=3.0552;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:87.30:0,87,4737	0/0:10,0:10:30.10:0,30,1738	0/0:16,0:16:48.14:0,48,2280	0/0:26,0:26:78.23:0,78,3872	0/0:37,0:37:99:0,105,5935	0/0:25,0:25:75.26:0,75,4310	0/0:22,0:22:66.23:0,66,3767	1/1:1,12:13:36.12:1317,36,0	0/0:25,0:25:75.21:0,75,4103	0/0:23,0:23:69.24:0,69,3710	0/0:14,0:14:42.14:0,42,2369	0/0:21,0:21:63.22:0,63,3717	0/0:24,0:24:72.25:0,72,4225	0/0:22,0:22:66.23:0,66,3771	0/0:33,0:33:96.32:0,96,5435	0/0:22,0:22:66.23:0,66,3684	0/0:22,0:22:66.23:0,66,3602	0/0:29,0:29:87.30:0,87,4828	1/1:3,9:12:35.29:1045,35,0	1/1:3,10:13:35.71:1115,36,0	1/1:0,8:8:24.08:695,24,0	0/0:23,0:23:69.18:0,69,3374	0/0:15,0:15:45.15:0,45,2568	0/0:19,0:19:57.20:0,57,3243	0/0:16,0:16:45.15:0,45,2416	0/0:41,0:41:99:0,123,6760	0/0:33,0:33:99:0,99,5564	0/0:8,0:8:24.08:0,24,1423
chr10	10329616	.	G	GAA	16753.69	PASS	AB=0.879;AC=54;AF=0.964;AN=56;BaseQRankSum=-4.951;DP=640;FS=11.018;HRun=9;HaplotypeScore=89.4815;InbreedingCoeff=0.2961;MQ=69.34;MQ0=4;MQRankSum=-1.546;QD=26.18;ReadPosRankSum=2.493;VQSLOD=3.6226;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,24:32:76.55:1086,77,0	1/1:0,7:7:21.02:296,21,0	0/1:8,0:9:23.77:24,0,88	0/1:10,0:12:1.24:1,0,55	1/1:6,23:32:80.09:1050,80,0	1/1:1,0:27:30.96:174,31,0	1/1:4,0:19:29.94:103,30,0	1/1:11,0:25:35.27:298,35,0	1/1:6,0:21:39.93:137,40,0	1/1:9,22:33:74.82:1059,75,0	1/1:1,16:18:54.13:770,54,0	1/1:5,19:26:53.62:750,54,0	1/1:2,21:24:54.18:814,54,0	1/1:1,19:20:45.15:693,45,0	1/1:3,21:25:47.65:701,48,0	1/1:5,15:20:33.08:508,33,0	1/1:5,12:19:39.59:567,40,0	1/1:6,19:26:50.88:801,51,0	1/1:3,1:16:38.98:364,39,0	1/1:10,1:25:41.49:360,41,0	1/1:1,0:9:8.98:78,9,0	1/1:1,23:24:69.15:1009,69,0	1/1:9,25:37:83.08:1145,83,0	1/1:2,9:13:18.06:260,18,0	1/1:4,16:19:39.13:600,39,0	1/1:5,33:40:99:1398,102,0	1/1:6,39:47:99:1542,105,0	1/1:1,8:8:12.04:167,12,0
chr10	10329838	.	CTGT	C	2578.25	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=10.300;DP=660;FS=2.451;HRun=0;HaplotypeScore=107.5305;InbreedingCoeff=0.9988;MQ=82.61;MQ0=0;MQRankSum=-5.024;QD=39.67;ReadPosRankSum=-1.161;VQSLOD=4.1642;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,114,2790	0/0:9,0:9:21.07:0,21,518	0/0:21,0:21:63.21:0,63,1416	0/0:20,0:20:60.19:0,60,1340	0/0:48,0:48:99:0,141,3323	0/0:23,0:23:69.22:0,69,1652	0/0:20,0:20:60.21:0,60,1464	1/1:0,15:15:45.14:731,45,0	0/0:31,0:31:90.29:0,90,2137	0/0:24,0:24:69.23:0,69,1653	0/0:21,0:21:63.22:0,63,1525	0/0:27,0:27:75.26:0,75,1846	0/0:31,0:31:87.30:0,87,2092	0/0:24,0:24:60.21:0,60,1474	0/0:20,0:20:54.16:0,54,1233	0/0:18,0:18:48.16:0,48,1183	0/0:32,0:32:93.32:0,93,2292	0/0:19,0:19:54.19:0,54,1289	1/1:0,16:16:48.15:780,48,0	1/1:2,16:18:36.12:614,36,0	1/1:0,16:16:36.12:614,36,0	0/0:25,0:25:63.22:0,63,1551	0/0:23,0:23:62.98:0,63,1487	0/0:19,0:19:57.20:0,57,1405	0/0:23,0:23:66.23:0,66,1626	0/0:32,0:32:93.28:0,93,2209	0/0:31,0:31:87.26:0,87,2078	0/0:13,0:13:39.13:0,39,953
chr10	10329920	.	TTAAGA	T	20824.07	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=15.451;DP=649;FS=0.000;HRun=0;HaplotypeScore=131.4050;InbreedingCoeff=0.9997;MQ=72.89;MQ0=0;MQRankSum=-4.674;QD=51.80;ReadPosRankSum=3.645;VQSLOD=5.2203;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,31:33:72.25:1533,72,0	1/1:0,11:11:27.09:575,27,0	0/0:12,0:12:32.85:0,33,903	0/0:13,0:13:39.13:0,39,1151	0/0:35,0:35:99:0,102,3140	0/0:29,0:29:87.30:0,87,2692	0/0:18,0:18:51.17:0,51,1448	0/0:34,0:34:92.98:0,93,2724	0/0:28,0:27:84.29:0,84,2497	1/1:1,26:27:78.22:1574,78,0	1/1:1,27:28:75.19:1550,75,0	1/1:0,14:14:36.12:766,36,0	1/1:1,25:26:66.23:1403,66,0	1/1:0,30:30:72.25:1530,72,0	1/1:1,23:24:51.18:1085,51,0	1/1:1,20:21:48.16:1020,48,0	1/1:1,24:25:56.73:1213,57,0	1/1:3,20:23:42.08:894,42,0	0/0:10,0:10:30.10:0,30,939	0/0:31,0:31:93.23:0,93,2736	0/0:12,0:12:36.12:0,36,1079	1/1:2,19:21:45.07:911,45,0	1/1:0,33:33:93.22:1979,93,0	1/1:0,16:16:42.14:895,42,0	0/0:25,0:25:75.25:0,75,2281	1/1:3,25:28:78.20:1534,78,0	1/1:2,25:27:72.25:1531,72,0	1/1:0,15:15:39.13:831,39,0
chr10	10330391	.	GTGTA	G	3784.98	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=11.739;DP=581;FS=20.016;HRun=0;HaplotypeScore=95.7888;InbreedingCoeff=0.9952;MQ=63.46;MQ0=0;MQRankSum=-3.254;QD=39.02;ReadPosRankSum=-2.814;VQSLOD=1.2314;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,102,2676	0/0:11,0:11:30.10:0,30,792	0/0:11,0:10:24.08:0,24,558	0/0:17,0:17:45.07:0,45,1050	0/0:27,0:27:75.24:0,75,1851	0/0:27,0:27:75.22:0,75,1856	0/0:24,0:24:66.21:0,66,1642	1/1:2,29:31:87.20:1402,87,0	0/0:14,0:14:42.10:0,42,1038	0/0:30,0:30:84.28:0,84,2140	0/0:24,0:24:63.22:0,63,1658	0/0:16,0:16:48.16:0,48,1259	0/0:13,0:13:39.13:0,39,988	0/0:20,0:20:57.20:0,57,1449	0/0:16,0:16:48.13:0,48,1125	0/0:13,0:13:39.05:0,39,883	0/0:33,0:33:99:0,99,2503	0/0:21,0:20:60.19:0,60,1482	1/1:3,27:30:78.10:1247,78,0	1/1:3,19:22:50.95:731,51,0	1/1:1,13:14:23.87:406,24,0	0/0:12,0:12:36.12:0,36,943	0/0:8,0:8:21.05:0,21,499	0/0:6,0:6:18.06:0,18,473	0/0:21,0:21:63.14:0,63,1390	0/0:30,0:30:81.27:0,81,2088	0/0:34,0:34:99:0,102,2676	0/0:19,0:19:51.17:0,51,1339
chr10	10330724	.	TTGC	T	5631.97	PASS	AB=1.000;AC=27;AF=0.587;AN=46;BaseQRankSum=-4.397;DP=567;FS=0.622;HRun=0;HaplotypeScore=83.4296;InbreedingCoeff=0.7688;MQ=68.82;MQ0=0;MQRankSum=1.685;QD=19.42;ReadPosRankSum=5.087;VQSLOD=4.5366;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:29,3:32:3.01:41,3,0	1/1:4,4:8:12.04:162,12,0	0/0:24,0:19:13.06:0,13,207	0/0:29,0:26:14.84:0,15,222	./.	./.	0/0:15,0:31:33.09:0,33,417	0/0:26,0:26:16.60:0,17,166	0/0:14,0:33:66.19:0,66,884	./.	0/0:10,0:10:0.47:0,0,1	1/1:6,13:19:33.11:446,33,0	1/1:9,13:22:42.14:567,42,0	1/1:9,15:24:39.13:527,39,0	1/1:9,15:24:36.12:486,36,0	1/1:9,18:27:48.16:648,48,0	1/1:8,19:27:54.18:729,54,0	1/1:5,10:15:24.08:324,24,0	0/0:16,0:16:1.72:0,2,4	0/1:3,0:3:0:0,0,0	0/0:21,0:21:3.01:0,3,56	1/1:13,2:15:3.01:41,3,0	./.	1/1:10,31:41:81.27:1094,81,0	0/0:17,0:17:3.01:0,3,59	./.	1/1:9,7:18:21:244,21,0	1/1:5,10:15:24.08:324,24,0
chr10	10331608	.	G	GTAGATAGATAGA	12529.84	PASS	AC=52;AF=1.000;AN=52;BaseQRankSum=-3.907;DP=768;FS=2.072;HRun=0;HaplotypeScore=219.4204;InbreedingCoeff=-0.0589;MQ=55.16;MQ0=0;MQRankSum=-1.611;QD=16.96;ReadPosRankSum=1.365;VQSLOD=3.3589;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:34,0:38:40.99:690,41,0	1/1:2,10:13:3.01:174,3,0	./.	./.	1/1:30,0:29:15.67:146,16,0	1/1:11,11:26:6.02:320,6,0	1/1:32,0:30:27.01:330,27,0	1/1:46,0:46:41.79:479,42,0	1/1:13,16:34:6.02:348,6,0	1/1:9,16:26:45.05:1713,45,0	1/1:9,16:28:6.02:213,6,0	1/1:8,0:23:21.07:535,21,0	1/1:17,10:33:11.87:493,12,0	1/1:12,0:35:26.76:696,27,0	1/1:12,19:35:3.01:132,3,0	1/1:7,15:25:9.03:513,9,0	1/1:21,0:21:9.01:212,9,0	1/1:18,0:18:20.93:406,21,0	1/1:7,0:13:20.98:335,21,0	1/1:10,0:28:17.99:399,18,0	1/1:26,0:26:29.93:267,30,0	1/1:9,0:32:8.85:300,9,0	1/1:10,0:22:3.01:76,3,0	1/1:13,0:37:0.01:71,0,0	1/1:27,0:27:9.03:344,9,0	1/1:14,24:45:81.86:2263,82,0	1/1:12,20:37:18.95:825,19,0	1/1:2,2:6:6.02:250,6,0
chr10	10331641	.	T	TAGATAGATAGAC	9279.29	PASS	AB=1.000;AC=28;AF=0.500;AN=56;BaseQRankSum=2.053;DP=694;FS=1.733;HRun=0;HaplotypeScore=221.6811;InbreedingCoeff=-0.7226;MQ=52.28;MQ0=1;MQRankSum=-8.718;QD=14.02;ReadPosRankSum=2.043;VQSLOD=3.4195;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:36,0:37:99:426,0,183	0/1:13,0:13:62.94:143,0,63	0/0:16,0:11:30.05:0,30,299	0/0:16,0:9:23.42:0,23,225	1/1:28,0:27:36.48:401,36,0	0/1:17,0:17:81.91:266,0,82	0/1:32,0:30:99:278,0,238	0/1:52,0:52:99:273,0,732	0/1:30,0:30:99:264,0,292	0/1:24,0:22:99:1178,0,163	0/1:26,0:26:99:153,0,212	0/1:22,0:22:99:442,0,122	0/1:28,0:28:99:402,0,189	0/1:31,0:31:99:567,0,175	0/1:26,0:26:83.83:84,0,194	0/1:22,0:22:93.89:436,0,94	0/1:21,0:21:31.40:31,0,49	0/1:17,0:16:99:384,0,132	0/1:20,0:20:99:162,0,286	0/1:29,0:29:99:294,0,248	0/1:24,0:24:78.48:78,0,155	0/1:22,0:22:42.67:255,0,43	0/1:19,0:19:45.22:45,0,138	0/1:29,0:29:99:104,0,130	1/1:0,10:18:9.03:392,9,0	0/1:37,0:37:99:1331,0,263	0/1:29,0:27:99:682,0,185	0/1:9,0:9:78.92:206,0,79
chr10	10331840	.	TGATA	T	1795.77	PASS	AB=0.923;AC=7;AF=0.125;AN=56;BaseQRankSum=3.416;DP=671;FS=0.639;HRun=0;HaplotypeScore=184.7037;InbreedingCoeff=0.8064;MQ=58.14;MQ0=2;MQRankSum=-2.800;QD=20.41;ReadPosRankSum=-2.704;VQSLOD=2.4729;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:13:8.77:0,9,211	0/0:7,0:7:18.05:0,18,308	0/0:21,0:17:36.95:0,37,735	0/0:8,0:6:18.06:0,18,352	0/0:37,0:37:81.26:0,81,1850	1/1:9,20:29:45.12:804,45,0	1/1:11,5:16:20.79:342,21,0	0/0:24,0:24:69.23:0,69,1636	1/1:0,31:31:45.15:777,45,0	0/0:52,0:51:99:0,139,2886	0/0:24,0:23:48.16:0,48,1182	0/0:16,0:16:24.54:0,25,493	0/0:34,0:34:69.21:0,69,1605	0/0:19,0:19:39.13:0,39,912	0/0:24,0:23:47.90:0,48,981	0/0:24,0:23:41.84:0,42,742	0/0:18,0:18:28.24:0,28,626	0/1:11,1:12:20.98:21,0,488	0/0:22,0:22:54.19:0,54,1303	0/0:37,0:37:93.24:0,93,2151	0/0:11,0:11:15.05:0,15,390	0/0:26,0:25:66.19:0,66,1489	0/0:28,0:28:39.13:0,39,1000	0/0:8,0:8:15.05:0,15,354	0/0:30,0:30:78.22:0,78,1643	0/0:34,0:33:97.80:0,98,2085	0/0:40,0:40:78.10:0,78,1592	0/0:25,0:25:60.10:0,60,1284
chr10	10331853	.	CATAGATAG	C	6286.78	PASS	AB=0.888;AC=38;AF=0.760;AN=50;BaseQRankSum=-4.375;DP=673;FS=0.000;HRun=0;HaplotypeScore=216.2614;InbreedingCoeff=0.3754;MQ=55.97;MQ0=8;MQRankSum=-2.055;QD=12.52;ReadPosRankSum=2.785;VQSLOD=3.7035;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:17,1:17:3.48:47,3,0	1/1:6,0:6:6.02:143,6,0	./.	./.	0/0:20,0:34:26.45:0,26,219	1/1:17,12:29:34.78:831,35,0	0/1:17,0:17:0.24:0,0,0	0/0:35,0:31:2.22:0,2,7	0/0:35,0:35:45.15:0,45,1256	1/1:30,17:46:39.13:877,39,0	1/1:15,7:22:3.01:65,3,0	1/1:6,0:18:18.05:252,18,0	0/1:29,0:31:9.62:184,0,10	1/1:15,0:17:9:119,9,0	1/1:12,11:21:12.04:297,12,0	1/1:10,16:25:15.05:371,15,0	1/1:18,2:20:2.15:75,2,0	0/1:18,2:20:23.93:378,0,24	1/1:20,0:20:6.02:108,6,0	1/1:27,3:30:10.28:201,10,0	./.	1/1:25,0:25:15.96:265,16,0	0/0:12,0:32:0.47:0,0,1	1/1:8,0:8:0.85:2,1,0	0/1:18,3:30:99:183,0,183	1/1:23,14:35:34.65:768,35,0	1/1:26,7:31:33.05:663,33,0	1/1:19,4:23:24.05:459,24,0
chr10	10331940	.	GGATAGATA	G	3061.52	PASS	AB=0.966;AC=24;AF=0.462;AN=52;BaseQRankSum=-0.570;DP=716;FS=4.801;HRun=0;HaplotypeScore=198.6282;InbreedingCoeff=0.6150;MQ=48.28;MQ0=29;MQRankSum=-3.803;QD=10.07;ReadPosRankSum=-1.562;VQSLOD=2.3261;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:25,2:26:2.52:398,0,3	1/1:5,0:10:2.35:8,2,0	./.	./.	0/0:20,0:20:4.85:0,5,69	1/1:21,0:19:2.96:19,3,0	0/0:19,0:17:0.23:0,0,3	0/0:54,0:48:0:0,0,0	0/0:24,0:21:3.01:0,3,56	0/0:35,0:34:44.12:0,44,661	0/0:24,0:23:38.81:0,39,1104	1/1:24,5:29:36.04:673,36,0	1/1:15,16:30:27.09:620,27,0	1/1:14,10:24:6.10:337,6,0	0/0:19,0:17:30.09:0,30,973	0/0:22,0:24:20.87:0,21,169	0/0:30,0:30:47.53:0,48,1289	0/0:20,0:21:22.97:0,23,185	1/1:19,0:19:17.39:233,17,0	0/0:24,0:24:14.15:0,14,253	1/1:9,0:7:0.47:1,0,0	1/1:13,15:28:2.91:40,3,0	1/1:29,2:29:9.03:215,9,0	1/1:10,1:11:6:64,6,0	0/1:31,0:29:44.91:72,0,45	1/1:33,0:32:24.08:555,24,0	0/0:42,0:45:57.75:0,58,452	0/0:11,0:25:8.98:0,9,73
chr10	10331992	.	AGATAGATG	A	3144.02	PASS	AB=1.000;AC=14;AF=0.250;AN=56;BaseQRankSum=3.410;DP=727;FS=5.480;HRun=0;HaplotypeScore=212.6969;InbreedingCoeff=0.2358;MQ=63.11;MQ0=15;MQRankSum=0.475;QD=10.08;ReadPosRankSum=0.272;VQSLOD=1.7924;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:32:99:208,0,339	0/0:8,0:8:11.44:0,11,77	0/0:17,0:16:35.40:0,35,409	0/0:13,0:13:38.88:0,39,318	0/1:18,0:17:4.89:5,0,305	0/0:23,0:22:59.46:0,59,442	0/0:22,0:20:43.61:0,44,341	1/1:33,0:24:62.44:564,62,0	0/0:25,0:24:68.29:0,68,503	0/0:43,0:43:99:0,117,1456	0/0:29,0:29:74.97:0,75,1516	0/1:28,0:28:99:358,0,209	0/1:35,0:35:99:381,0,335	0/1:24,0:24:99:207,0,256	0/0:24,0:23:63.06:0,63,1324	0/0:17,0:17:42.93:0,43,471	0/0:29,0:29:64.66:0,65,1715	0/0:24,0:24:60.82:0,61,610	1/1:5,21:22:62.94:762,63,0	0/1:41,0:39:21.82:22,0,130	1/1:19,0:17:39:445,39,0	0/0:31,0:31:35.86:0,36,425	0/1:23,0:22:97.30:97,0,273	0/0:16,0:16:9.41:0,9,200	0/0:16,0:16:8.69:0,9,333	0/1:32,0:31:99:269,0,463	0/0:48,0:48:34.77:0,35,1122	0/0:30,0:29:48.44:0,48,423
chr10	10331996	.	AGATG	A	1935.79	PASS	AB=1.000;AC=14;AF=0.250;AN=56;BaseQRankSum=6.756;DP=751;FS=10.736;HRun=0;HaplotypeScore=177.5537;InbreedingCoeff=0.4196;MQ=69.08;MQ0=10;MQRankSum=1.937;QD=6.50;ReadPosRankSum=-1.112;VQSLOD=2.0643;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:33:33.22:0,33,474	0/0:13,0:13:26.44:0,26,216	0/0:23,0:22:58.49:0,58,568	0/0:16,0:16:34.20:0,34,328	0/1:16,0:16:20.18:20,0,238	0/0:28,0:28:74.88:0,75,563	0/0:23,0:21:50.75:0,51,406	1/1:20,19:33:86.86:764,87,0	0/0:24,0:24:65.28:0,65,465	0/0:45,0:45:1.48:0,1,813	0/0:27,0:27:53.59:0,54,945	0/0:26,0:26:22.94:0,23,315	0/1:36,0:36:9.28:9,0,365	0/0:24,0:24:6.72:0,7,289	0/0:24,0:23:63.02:0,63,796	0/1:18,0:18:50.50:51,0,228	0/0:29,0:29:62.88:0,63,1041	0/1:24,0:24:48.65:49,0,274	1/1:24,0:22:54.65:500,55,0	1/1:4,38:41:14.89:170,15,0	1/1:19,0:17:41.98:394,42,0	0/0:31,0:31:53.30:0,53,445	0/0:22,0:21:34.06:0,34,356	0/0:13,0:13:29.41:0,29,244	0/0:16,0:16:41.69:0,42,444	0/0:34,0:33:57.34:0,57,640	0/1:47,0:47:99:151,0,523	0/1:33,0:32:1.57:2,0,360
chr10	10332503	.	G	GT	9210.99	PASS	AB=0.545;AC=33;AF=0.589;AN=56;BaseQRankSum=-11.710;DP=544;FS=3.709;HRun=8;HaplotypeScore=52.6992;InbreedingCoeff=0.8811;MQ=75.11;MQ0=0;MQRankSum=-0.795;QD=26.39;ReadPosRankSum=3.296;VQSLOD=5.6288;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,35:40:87.26:1003,87,0	1/1:4,7:12:27.06:295,27,0	0/0:9,0:9:0.59:0,1,65	0/0:12,0:12:11.73:0,12,78	0/0:16,0:16:44.61:0,45,361	0/0:17,0:17:51.02:0,51,463	0/0:23,0:23:50.97:0,51,453	0/0:22,0:23:56.68:0,57,498	0/0:21,0:21:48:0,48,436	1/1:4,18:22:51.09:544,51,0	1/1:3,13:16:42.12:483,42,0	1/1:3,18:21:54.16:623,54,0	1/1:3,12:16:39.11:448,39,0	1/1:4,23:27:63.15:712,63,0	1/1:3,21:24:32.72:630,33,0	0/1:2,10:12:6.83:155,0,7	1/1:3,29:32:84.72:970,85,0	1/1:1,25:26:66.20:762,66,0	0/0:16,0:16:38.99:0,39,349	0/0:17,0:17:42.89:0,43,378	0/0:23,0:23:59.94:0,60,529	1/1:3,8:12:24.02:276,24,0	1/1:1,12:13:33.10:381,33,0	1/1:1,13:14:33.10:381,33,0	0/0:18,0:18:48.03:0,48,439	1/1:6,14:20:48.12:532,48,0	1/1:0,16:16:39.12:450,39,0	1/1:6,19:26:5.10:567,5,0
chr10	10333788	.	G	GCACA	19652.99	PASS	AB=0.600;AC=42;AF=0.750;AN=56;BaseQRankSum=-9.196;DP=767;FS=0.000;HRun=0;HaplotypeScore=164.8802;InbreedingCoeff=0.7630;MQ=58.80;MQ0=5;MQRankSum=-1.812;QD=32.81;ReadPosRankSum=3.913;VQSLOD=4.9735;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:13,38:56:99:2492,113,0	1/1:2,13:17:32.85:753,33,0	0/0:40,0:23:36:0,36,503	0/0:32,0:26:31.87:0,32,500	1/1:19,1:28:9.26:153,9,0	1/1:5,0:29:54.89:249,55,0	0/1:10,0:21:78.20:78,0,117	0/0:10,0:25:29.97:0,30,325	0/1:4,0:25:21.16:159,0,21	1/1:10,24:39:83.21:1736,83,0	1/1:9,10:20:21.07:519,21,0	1/1:7,16:24:41.88:957,42,0	1/1:7,16:30:53.33:1129,53,0	1/1:12,14:32:47.37:999,47,0	1/1:4,23:28:56.93:1347,57,0	1/1:10,13:24:44.62:985,45,0	1/1:9,16:26:38.87:902,39,0	1/1:5,25:31:57.20:1374,57,0	0/0:5,0:15:17.85:0,18,240	0/0:2,0:16:30.03:0,30,279	0/0:5,0:37:78.08:0,78,725	1/1:7,24:35:48.08:1186,48,0	1/1:6,16:25:6.49:1139,6,0	1/1:9,18:29:42.14:1039,42,0	1/1:20,0:18:5.81:105,6,0	1/1:8,17:29:53.64:1154,54,0	1/1:2,15:18:35.86:827,36,0	1/1:3,7:11:15.05:370,15,0
chr10	10335198	.	G	GGTGTGTGTGTGTGTGTG	26631.86	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=6.279;DP=757;FS=0.662;HRun=0;HaplotypeScore=390.6333;InbreedingCoeff=0.8212;MQ=45.52;MQ0=3;MQRankSum=-8.051;QD=38.26;ReadPosRankSum=5.663;VQSLOD=2.5024;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:30:6.37:917,6,0	1/1:6,0:20:41.85:1067,42,0	0/0:34,0:25:33.65:0,34,1666	0/0:26,0:24:47.86:0,48,1342	1/1:17,0:29:33.11:852,33,0	1/1:23,1:28:24.08:1380,24,0	1/1:30,0:21:1.36:618,1,0	1/1:18,0:25:54.15:741,54,0	1/1:19,0:20:30.52:1689,31,0	1/1:16,0:32:83.08:1805,83,0	1/1:9,0:14:15.01:404,15,0	1/1:20,0:34:63.08:1384,63,0	1/1:15,0:35:74.53:1819,75,0	1/1:20,0:35:57.20:1477,57,0	1/1:16,0:25:33.11:805,33,0	1/1:18,0:38:81.28:1945,81,0	1/1:9,0:17:24.08:624,24,0	1/1:10,0:19:18.06:474,18,0	1/1:12,0:15:34.86:499,35,0	1/1:17,0:29:41.90:682,42,0	1/1:21,0:30:26.83:342,27,0	1/1:19,0:30:48.16:1148,48,0	1/1:17,0:26:26.56:650,27,0	1/1:17,0:28:41.24:1071,41,0	1/1:9,0:23:45.15:1130,45,0	1/1:16,0:30:78.02:1659,78,0	1/1:11,0:28:47.80:1237,48,0	1/1:8,0:9:9.03:214,9,0
chr10	10336458	.	GCACA	G	6601.47	PASS	AC=48;AF=0.889;AN=54;BaseQRankSum=-1.532;DP=604;FS=0.000;HRun=0;HaplotypeScore=119.4655;InbreedingCoeff=0.5067;MQ=59.00;MQ0=15;MQRankSum=-0.300;QD=12.16;ReadPosRankSum=3.761;VQSLOD=4.3485;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:31,21:52:21.07:331,21,0	1/1:5,7:14:15.04:198,15,0	0/0:9,0:3:0.47:0,0,1	./.	0/0:6,0:9:6.67:0,7,63	1/1:7,0:21:21.02:195,21,0	1/1:15,0:21:9.01:83,9,0	1/1:17,0:15:2.51:24,3,0	1/1:12,0:28:39.04:363,39,0	1/1:11,11:22:5.20:333,5,0	1/1:6,9:15:21.06:292,21,0	1/1:8,9:17:24.08:366,24,0	1/1:11,10:25:45.08:618,45,0	1/1:12,11:25:18.43:246,18,0	1/1:6,12:18:27.09:425,27,0	1/1:5,4:14:20.86:269,21,0	1/1:8,17:27:42.13:596,42,0	1/1:10,16:26:27.09:425,27,0	1/1:13,8:22:17.67:232,18,0	1/1:5,6:11:3.01:47,3,0	1/1:27,21:47:11.87:189,12,0	1/1:4,10:15:9.49:123,9,0	1/1:13,6:19:2.91:47,3,0	1/1:16,22:37:38.61:556,39,0	0/0:10,0:17:2.94:0,3,18	1/1:10,8:18:23.84:313,24,0	1/1:5,16:21:17.99:283,18,0	1/1:2,1:3:3.01:47,3,0
chr10	10345085	.	ACAACAAC	A	1739.47	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=7.174;DP=647;FS=10.926;HRun=0;HaplotypeScore=159.9786;InbreedingCoeff=0.9788;MQ=66.48;MQ0=2;MQRankSum=-8.058;QD=31.06;ReadPosRankSum=-0.291;VQSLOD=2.9294;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:59.87:0,60,3083	0/0:8,0:8:24.08:0,24,900	0/0:30,0:25:71.70:0,72,2094	0/0:31,0:24:70.81:0,71,2037	0/0:32,0:32:96.32:0,96,3594	1/1:0,22:22:42.14:1109,42,0	1/1:0,19:20:15.05:386,15,0	0/0:33,0:33:81.07:0,81,2371	1/1:0,14:14:15.05:383,15,0	0/0:25,0:25:75.25:0,75,2863	0/0:18,0:18:54.17:0,54,2027	0/0:14,0:14:42.13:0,42,1591	0/0:20,0:20:60.17:0,60,1919	0/0:20,0:20:60.20:0,60,2223	0/0:23,0:23:69.21:0,69,2580	0/0:18,0:18:54.19:0,54,2066	0/0:28,0:28:84.29:0,84,3058	0/0:29,0:29:87.30:0,87,3278	0/0:17,0:17:13.07:0,13,969	0/0:28,0:28:75.43:0,75,2243	0/0:15,0:15:45.14:0,45,1023	0/0:27,0:27:81.28:0,81,3107	0/0:19,0:19:57.20:0,57,2261	0/0:12,0:12:27.09:0,27,993	0/0:29,0:29:78.25:0,78,2682	0/0:20,0:20:60.21:0,60,2288	0/0:40,0:40:99:0,120,4384	0/0:24,0:24:69.07:0,69,2854
chr10	10345092	.	C	CA	1670.14	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=7.718;DP=652;FS=3.595;HRun=2;HaplotypeScore=90.9691;InbreedingCoeff=0.8197;MQ=67.40;MQ0=2;MQRankSum=0.058;QD=15.18;ReadPosRankSum=-5.306;VQSLOD=1.8117;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:74.04:0,74,891	0/0:7,0:7:20.90:0,21,235	0/0:30,0:25:17.42:0,17,542	0/0:27,0:21:49.58:0,50,566	0/0:33,0:33:96.15:0,96,947	0/0:22,0:22:7.06:0,7,48	0/1:20,0:20:10.01:10,0,11	1/1:9,24:34:52.43:725,52,0	0/0:15,0:15:6.17:0,6,17	0/0:24,0:24:69.22:0,69,855	0/0:20,0:20:57.15:0,57,675	0/0:17,0:17:48.13:0,48,580	0/0:18,0:18:48.12:0,48,567	0/0:22,0:22:49.98:0,50,729	0/0:22,0:22:63.20:0,63,780	0/0:20,0:20:57.18:0,57,705	0/0:29,0:29:75.21:0,75,910	0/0:29,0:29:84.20:0,84,1019	1/1:11,2:13:7.77:177,8,0	1/1:5,25:32:30.80:704,31,0	1/1:5,5:11:17.38:212,17,0	0/0:27,0:27:75.24:0,75,929	0/0:19,0:19:57.14:0,57,689	0/0:12,0:12:27.08:0,27,334	0/0:26,0:26:65.88:0,66,673	0/0:20,0:20:60.19:0,60,741	0/0:40,0:40:99:0,111,1372	0/0:35,0:35:95.95:0,96,1158
chr10	10345094	.	AC	A	1740.98	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=11.203;DP=641;FS=0.804;HRun=1;HaplotypeScore=88.2101;InbreedingCoeff=0.9934;MQ=65.99;MQ0=2;MQRankSum=-3.104;QD=12.17;ReadPosRankSum=-4.324;VQSLOD=0.5182;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,1:25:53.05:0,53,899	0/0:8,0:8:23.83:0,24,262	0/0:29,0:23:30.57:0,31,497	0/0:27,0:20:37.62:0,38,566	0/0:32,0:32:95.20:0,95,855	1/1:23,0:23:42.81:226,43,0	1/1:18,0:18:14.34:77,14,0	1/1:31,1:32:82.35:605,82,0	1/1:15,0:15:15.92:80,16,0	0/0:25,0:25:75.22:0,75,973	0/0:20,0:20:60.16:0,60,765	0/0:17,0:17:51.13:0,51,632	0/0:17,0:17:51.13:0,51,630	0/0:22,0:22:60.33:0,60,786	0/0:22,0:22:66.17:0,66,842	0/0:20,0:20:60.16:0,60,766	0/0:26,0:26:75.15:0,75,949	0/0:29,0:29:87.20:0,87,1129	1/1:12,1:13:31.80:260,32,0	1/1:31,0:31:62.42:445,62,0	1/1:9,2:11:29.25:247,29,0	0/0:25,0:25:75.23:0,75,1003	0/0:20,0:20:60.12:0,60,766	0/0:12,0:12:27.08:0,27,359	0/0:25,0:25:65.64:0,66,597	0/0:21,0:21:63.18:0,63,806	0/0:39,0:39:99:0,117,1471	0/0:37,0:37:99:0,107,1288
chr10	10345097	.	A	AC	2215.28	PASS	AB=1.000;AC=8;AF=0.143;AN=56;BaseQRankSum=-0.526;DP=642;FS=0.392;HRun=0;HaplotypeScore=88.3302;InbreedingCoeff=0.4448;MQ=67.21;MQ0=2;MQRankSum=1.085;QD=14.87;ReadPosRankSum=0.647;VQSLOD=5.3059;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:77.39:0,77,979	0/0:8,0:8:15.80:0,16,267	0/0:29,0:23:39.34:0,39,652	0/0:26,0:19:50.97:0,51,606	1/1:1,32:33:96.18:1320,96,0	0/0:24,0:24:45.24:0,45,337	0/0:19,0:19:14.64:0,15,115	0/1:33,0:33:52.18:52,0,241	0/0:14,0:14:14.93:0,15,114	0/0:23,0:23:69.22:0,69,949	0/0:18,0:18:54.17:0,54,736	0/0:17,0:17:51.15:0,51,665	0/0:15,0:15:45.15:0,45,623	0/0:23,0:23:69.06:0,69,882	0/0:22,0:22:66.19:0,66,871	0/0:19,0:19:57.19:0,57,793	0/0:24,0:24:69.20:0,69,926	0/0:29,0:29:84.18:0,84,1127	0/1:12,0:12:3.49:3,0,170	0/1:32,0:32:75.38:75,0,146	0/1:11,0:11:9.44:9,0,94	0/0:25,0:25:75.24:0,75,1031	0/0:21,0:21:60.18:0,60,805	0/0:13,0:13:33.07:0,33,424	1/1:3,25:28:58.84:898,59,0	0/0:21,0:21:63.19:0,63,835	0/0:39,0:39:99:0,117,1565	0/0:38,0:38:99:0,105,1391
chr10	10346309	.	GTATATATGTGTATATATGTGTA	G	2801.26	PASS	AB=0.765;AC=6;AF=0.107;AN=56;BaseQRankSum=5.834;DP=880;FS=7.946;HRun=0;HaplotypeScore=453.2012;InbreedingCoeff=0.5547;MQ=58.56;MQ0=2;MQRankSum=-8.554;QD=29.80;ReadPosRankSum=-1.125;VQSLOD=0.5176;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:32.43:0,32,3246	0/0:15,0:15:36.12:0,36,2902	0/0:23,0:15:0.02:0,0,511	0/0:31,0:16:23.86:0,24,731	0/0:42,0:42:99:0,114,8525	1/1:7,18:25:21.07:904,21,0	1/1:10,0:10:15.05:561,15,0	0/0:55,0:55:99:0,141,7982	0/1:4,32:36:99:1393,0,159	0/0:43,0:43:99:0,114,8418	0/0:19,0:19:51.18:0,51,3931	0/0:31,0:31:84.29:0,84,6796	0/0:39,0:39:99:0,99,7314	0/0:28,0:28:69.21:0,69,4505	0/0:33,0:33:87.02:0,87,6197	0/0:37,0:37:99:0,99,7459	0/0:23,0:23:48.16:0,48,3730	0/1:23,0:23:77.18:77,0,4304	0/0:11,0:10:21.07:0,21,1600	0/0:43,0:43:99:0,111,8977	0/0:28,0:28:68.60:0,69,5890	0/0:34,0:34:93.32:0,93,7044	0/0:37,0:37:93.32:0,93,6580	0/0:19,0:19:42.09:0,42,3044	0/0:39,0:39:99:0,114,9053	0/0:52,0:51:99:0,140,11000	0/0:42,0:42:96.33:0,96,7389	0/0:27,0:27:60.21:0,60,4289
chr10	10346320	.	T	TGTG	866.08	PASS	AB=0.905;AC=3;AF=0.054;AN=56;BaseQRankSum=7.958;DP=894;FS=4.035;HRun=0;HaplotypeScore=149.7966;InbreedingCoeff=0.0701;MQ=59.63;MQ0=3;MQRankSum=-7.880;QD=14.20;ReadPosRankSum=0.272;VQSLOD=3.1692;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:41.76:0,42,943	0/0:12,0:12:36.12:0,36,671	0/0:23,0:12:9.54:0,10,343	0/0:28,0:13:33.05:0,33,483	0/0:46,0:46:99:0,132,2312	0/1:18,0:18:5.85:318,0,6	0/1:6,4:10:44.29:136,0,44	0/0:63,0:63:99:0,184,3225	0/1:33,0:33:33.03:512,0,33	0/0:49,0:49:99:0,147,2561	0/0:21,0:21:60.21:0,60,1102	0/0:35,0:35:99:0,102,1878	0/0:38,0:38:99:0,111,1975	0/0:26,0:26:78.24:0,78,1382	0/0:33,0:33:96.09:0,96,1696	0/0:41,0:41:99:0,120,2037	0/0:23,0:23:51.15:0,51,915	0/0:25,0:25:72.16:0,72,1208	0/0:11,0:10:30.10:0,30,543	0/0:41,0:41:99:0,120,2127	0/0:29,0:29:86.88:0,87,1512	0/0:35,0:35:99:0,102,1861	0/0:37,0:37:99:0,108,1963	0/0:20,0:20:48.15:0,48,861	0/0:42,0:42:99:0,126,2235	0/0:52,0:51:99:0,116,2616	0/0:37,0:37:99:0,102,1853	0/0:28,0:28:75.26:0,75,1345
chr10	10346329	.	GTA	G	403.98	PASS	AB=0.943;AC=7;AF=0.125;AN=56;BaseQRankSum=8.377;DP=894;FS=14.996;HRun=0;HaplotypeScore=133.7468;InbreedingCoeff=0.7272;MQ=60.50;MQ0=3;MQRankSum=-7.452;QD=4.21;ReadPosRankSum=-3.140;VQSLOD=1.0717;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:48.50:0,49,825	0/0:14,0:14:39.09:0,39,590	0/0:31,0:13:20.58:0,21,398	0/1:31,0:14:11.24:11,0,219	0/0:44,0:44:99:0,126,2057	1/1:18,0:18:10.67:98,11,0	1/1:5,6:11:17.62:261,18,0	0/0:63,0:63:99:0,138,2418	1/1:34,0:34:0.03:163,0,0	0/0:47,0:47:99:0,132,2113	0/0:24,0:24:57.16:0,57,922	0/0:38,0:38:99:0,111,1749	0/0:38,0:38:99:0,99,1568	0/0:19,0:19:54.17:0,54,898	0/0:35,0:35:81.22:0,81,1279	0/0:36,1:37:65.68:0,66,1698	0/0:23,0:23:47.98:0,48,788	0/0:28,0:28:74.34:0,74,1125	0/0:10,0:9:27.09:0,27,444	0/0:42,0:42:99:0,120,1927	0/0:32,0:32:88.88:0,89,1461	0/0:34,0:34:93.25:0,93,1469	0/0:32,0:32:87.30:0,87,1497	0/0:21,0:21:48.08:0,48,730	0/0:40,0:40:99:0,120,1983	0/0:53,0:53:99:0,148,2349	0/0:35,0:35:99:0,99,1590	0/0:25,0:26:63.13:0,63,965
chr10	10347526	.	GCACTCA	G	2212.71	PASS	AB=0.944;AC=6;AF=0.107;AN=56;BaseQRankSum=9.729;DP=642;FS=9.384;HRun=0;HaplotypeScore=137.4477;InbreedingCoeff=0.6469;MQ=71.17;MQ0=0;MQRankSum=-8.899;QD=35.69;ReadPosRankSum=0.216;VQSLOD=3.0546;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,148,5094	0/0:16,0:16:48.16:0,48,1683	0/1:9,0:10:18.79:19,0,286	0/1:7,0:8:7.97:8,0,134	1/1:3,19:22:48.16:1076,48,0	0/0:20,0:20:57.20:0,57,1980	0/0:28,0:28:72.23:0,72,2422	0/0:19,0:19:51.17:0,51,1785	0/0:25,0:25:72.25:0,72,2502	0/0:20,0:20:57.20:0,57,1991	0/0:17,0:17:42.14:0,42,1453	0/0:24,0:24:66.23:0,66,2308	0/0:16,0:16:48.16:0,48,1676	0/0:26,0:26:72.23:0,72,2418	0/0:19,0:19:54.19:0,54,1894	0/0:25,0:25:72.25:0,72,2469	0/0:35,0:35:99:0,102,3457	0/0:24,0:24:69.24:0,69,2313	0/0:12,0:12:33.11:0,33,1125	0/0:27,0:27:75.26:0,75,2526	0/0:28,0:28:81.26:0,81,2739	0/0:25,0:25:63.22:0,63,2209	0/0:22,0:22:63.22:0,63,2200	0/0:25,0:25:75.26:0,75,2574	1/1:4,18:21:54.19:1244,54,0	0/0:29,0:29:84.28:0,84,2865	0/0:24,0:24:69.24:0,69,2419	0/0:21,0:21:54.18:0,54,1770
chr10	10347570	.	C	CT	1252.10	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.476;DP=606;FS=5.987;HRun=7;HaplotypeScore=73.0140;InbreedingCoeff=0.9776;MQ=72.78;MQ0=0;MQRankSum=-4.648;QD=26.09;ReadPosRankSum=-1.093;VQSLOD=3.8991;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,114,1072	0/0:13,0:13:33.05:0,33,319	0/0:14,0:13:17.83:0,18,135	0/0:9,0:9:11.63:0,12,72	1/1:8,13:21:47.98:526,48,0	0/0:19,0:19:54.08:0,54,517	0/0:19,0:19:51.07:0,51,486	0/0:30,0:30:80.99:0,81,737	0/0:23,0:23:65.96:0,66,609	0/0:28,0:28:69.09:0,69,659	0/0:18,0:18:51.06:0,51,483	0/0:13,0:13:30.04:0,30,289	0/0:17,0:17:51.01:0,51,466	0/0:24,0:24:63.07:0,63,599	0/0:24,0:24:69.09:0,69,660	0/0:21,0:21:48.07:0,48,464	0/0:35,0:35:95.99:0,96,904	0/0:14,0:14:27.04:0,27,261	0/0:19,0:19:42:0,42,391	0/0:27,0:27:75.08:0,75,716	0/0:18,0:18:33.05:0,33,319	0/0:21,0:21:63.04:0,63,597	0/0:25,0:25:56.14:0,56,640	0/0:17,0:17:39.03:0,39,366	1/1:3,24:27:72.14:848,72,0	0/0:28,0:28:65.88:0,66,597	0/0:23,0:23:60.09:0,60,579	0/0:13,0:13:39.01:0,39,358
chr10	10348640	.	C	CCACACACACA	11888.84	PASS	AB=0.952;AC=43;AF=0.768;AN=56;BaseQRankSum=-10.262;DP=712;FS=1.210;HRun=0;HaplotypeScore=222.8933;InbreedingCoeff=0.6927;MQ=45.81;MQ0=38;MQRankSum=-3.360;QD=21.62;ReadPosRankSum=-2.248;VQSLOD=4.0036;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:29,5:39:1.63:304,2,0	1/1:6,4:11:1.73:148,2,0	0/0:47,0:19:12.04:0,12,229	0/1:38,0:25:23.75:24,0,123	0/0:2,0:24:54.18:0,54,1208	0/0:18,0:17:27.09:0,27,628	0/0:21,0:21:24.01:0,24,506	1/1:26,0:34:28.98:450,29,0	0/0:26,0:26:5.73:0,6,669	1/1:17,3:25:21.05:621,21,0	1/1:8,5:19:10.76:457,11,0	1/1:9,10:27:15.05:652,15,0	1/1:11,6:21:21.07:877,21,0	1/1:12,7:25:23.88:888,24,0	1/1:15,1:27:20.27:855,20,0	1/1:4,11:19:15.05:631,15,0	1/1:12,5:20:12.04:532,12,0	1/1:9,8:21:23.11:663,23,0	1/1:17,0:27:41.17:864,41,0	1/1:11,0:22:11.23:321,11,0	1/1:13,0:18:4.77:76,5,0	1/1:8,8:22:13.65:588,14,0	1/1:10,1:16:1.14:87,1,0	1/1:15,9:28:6.02:241,6,0	0/0:9,0:25:33.10:0,33,690	1/1:10,9:24:39.13:1111,39,0	1/1:12,9:31:21.54:890,22,0	1/1:2,4:8:15.05:609,15,0
chr10	10348656	.	ACACACACAC	A	3808.93	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=4.616;DP=716;FS=2.337;HRun=0;HaplotypeScore=233.0894;InbreedingCoeff=0.9907;MQ=47.50;MQ0=38;MQRankSum=-6.229;QD=54.41;ReadPosRankSum=0.795;VQSLOD=3.6141;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:35:27.78:0,28,581	0/0:13,0:12:22.65:0,23,664	0/0:44,0:18:53.90:0,54,1449	0/0:37,0:22:44.81:0,45,1347	0/0:25,0:25:65.71:0,66,1060	1/1:9,10:19:42.07:1031,42,0	1/1:8,16:25:57.11:1320,57,0	0/0:37,0:35:99:0,99,2634	1/1:9,17:26:65.34:1458,65,0	0/0:24,0:23:66.18:0,66,2255	0/0:20,0:19:26.35:0,26,726	0/0:27,0:26:27.65:0,28,750	0/0:22,0:19:27.85:0,28,1020	0/0:27,0:26:47.94:0,48,1396	0/0:28,0:26:44.25:0,44,1372	0/0:26,0:25:42.14:0,42,1142	0/0:21,0:20:33.58:0,34,879	0/0:26,0:25:51.84:0,52,1213	0/0:33,0:30:84.28:0,84,2719	0/0:17,0:17:29.01:0,29,688	0/0:17,0:15:18.05:0,18,453	0/0:25,0:25:42.83:0,43,1268	0/0:20,0:18:31:0,31,627	0/0:27,0:27:24.08:0,24,531	0/0:23,0:23:51.17:0,51,901	0/0:31,0:29:81.23:0,81,2522	0/0:31,0:30:45.06:0,45,1324	0/0:8,0:8:18.06:0,18,630
chr10	10348664	.	AC	A	1220.21	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=5.901;DP=696;FS=0.000;HRun=1;HaplotypeScore=180.3750;InbreedingCoeff=0.9787;MQ=54.86;MQ0=35;MQRankSum=-6.610;QD=17.19;ReadPosRankSum=1.534;VQSLOD=3.7690;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:30:18.08:0,18,157	0/0:10,0:9:16.87:0,17,162	0/0:44,0:21:57.16:0,57,698	0/0:30,0:18:30.51:0,31,420	0/0:30,0:30:48.42:0,48,294	1/1:14,6:20:41.58:327,42,0	1/1:17,6:23:50.67:462,51,0	0/0:36,0:34:92.78:0,93,959	1/1:20,8:28:66.35:574,66,0	0/0:23,0:22:59.89:0,60,598	0/0:22,0:21:30.65:0,31,288	0/0:27,0:26:36.48:0,36,352	0/0:21,0:19:32.70:0,33,296	0/0:28,0:27:50.03:0,50,466	0/0:30,0:28:49.84:0,50,495	0/0:24,0:23:40.13:0,40,377	0/0:21,0:20:33.04:0,33,335	0/0:22,0:22:49.17:0,49,545	0/0:35,0:33:98.94:0,99,1016	0/0:17,0:17:34.02:0,34,316	0/0:17,0:15:18.05:0,18,225	0/0:27,0:27:50.99:0,51,458	0/0:21,0:19:35.64:0,36,358	0/0:23,0:23:17.17:0,17,140	0/0:19,0:19:19.36:0,19,159	0/0:28,0:26:65.86:0,66,715	0/0:29,0:28:32.65:0,33,304	0/0:8,0:8:15.02:0,15,163
chr10	10348692	.	CAA	C	2511.51	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=7.730;DP=678;FS=2.262;HRun=5;HaplotypeScore=137.7509;InbreedingCoeff=0.9990;MQ=75.05;MQ0=21;MQRankSum=-7.402;QD=31.79;ReadPosRankSum=1.608;VQSLOD=2.3252;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:29:72.20:0,72,1274	0/0:12,0:11:30.05:0,30,487	0/0:27,0:27:69.18:0,69,1154	0/0:17,0:16:40.90:0,41,648	0/0:34,0:34:95.76:0,96,1640	1/1:1,24:25:66.22:922,66,0	1/1:8,19:27:57.10:770,57,0	0/0:46,0:46:99:0,126,2259	1/1:2,25:27:69.23:962,69,0	0/0:28,0:27:78.23:0,78,1366	0/0:19,0:18:45.11:0,45,786	0/0:25,0:24:39.13:0,39,715	0/0:26,0:23:57.06:0,57,970	0/0:19,0:18:42.10:0,42,733	0/0:30,0:28:72.16:0,72,1246	0/0:26,0:25:57.16:0,57,1011	0/0:15,0:14:27.04:0,27,430	0/0:25,0:25:69.19:0,69,1227	0/0:26,0:26:60.16:0,60,1038	0/0:18,0:18:45.07:0,45,724	0/0:22,0:20:42.14:0,42,760	0/0:23,0:23:51.13:0,51,900	0/0:21,0:19:51.11:0,51,869	0/0:19,0:19:30.10:0,30,545	0/0:22,0:22:60.14:0,60,1028	0/0:34,0:32:87.30:0,87,1595	0/0:23,0:22:36.05:0,36,591	0/0:11,0:11:30.05:0,30,513
chr10	10350101	.	G	GT	1347.54	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.127;DP=681;FS=4.203;HRun=1;HaplotypeScore=74.0957;InbreedingCoeff=0.9970;MQ=64.95;MQ0=1;MQRankSum=0.587;QD=34.55;ReadPosRankSum=1.404;VQSLOD=3.7492;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,120,1542	0/0:9,0:9:27.09:0,27,350	0/0:18,0:16:33.70:0,34,486	0/0:30,0:29:75.23:0,75,954	1/1:0,25:25:66.22:974,66,0	0/0:12,0:12:36.12:0,36,467	0/0:20,0:20:51.16:0,51,662	0/0:27,0:27:81.22:0,81,1000	0/0:27,0:27:81.24:0,81,1023	0/0:26,0:26:75.24:0,75,974	0/0:13,0:13:39.13:0,39,506	0/0:33,0:33:99:0,99,1256	0/0:33,0:33:96.31:0,96,1246	0/0:44,0:44:99:0,129,1632	0/0:22,0:22:66.21:0,66,857	0/0:25,0:25:75.21:0,75,944	0/0:30,0:29:78.23:0,78,997	0/0:22,0:22:63.20:0,63,818	0/0:20,0:20:54.18:0,54,701	0/0:21,0:21:60.18:0,60,765	0/0:27,0:27:78.25:0,78,1012	0/0:22,0:22:66.21:0,66,856	0/0:23,0:23:69.14:0,69,873	0/0:36,0:36:99:0,99,1254	1/1:0,14:14:33.11:495,33,0	0/0:29,0:29:84.26:0,84,1075	0/0:24,0:24:69.20:0,69,879	0/0:7,0:7:21.07:0,21,272
chr10	10350311	.	TACACACACACACACACACACACAC	T	14778.62	PASS	AB=0.762;AC=38;AF=0.679;AN=56;BaseQRankSum=9.523;DP=691;FS=7.920;HRun=0;HaplotypeScore=321.8002;InbreedingCoeff=0.6017;MQ=54.50;MQ0=51;MQRankSum=-4.806;QD=37.04;ReadPosRankSum=1.762;VQSLOD=2.2337;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:20,14:35:21.07:931,21,0	1/1:7,3:10:6.02:376,6,0	0/0:69,0:15:2.98:0,3,22	0/0:71,0:22:0:0,0,0	0/0:29,0:26:18.06:0,18,797	1/1:5,0:12:9.03:405,9,0	0/1:25,0:28:15.94:249,0,16	0/0:28,0:28:27.08:0,27,1269	1/1:10,0:22:4.11:995,4,0	1/1:15,5:19:15.04:546,15,0	1/1:8,0:7:2.76:20,3,0	1/1:14,7:22:15.05:909,15,0	1/1:17,9:27:32.89:1880,33,0	1/1:10,6:16:9.03:558,9,0	1/1:9,10:18:24.08:1452,24,0	1/1:10,8:17:15.05:923,15,0	1/1:25,8:31:8.76:515,9,0	1/1:8,2:9:5.99:209,6,0	0/0:11,0:10:5.98:0,6,134	0/0:11,0:14:12.70:0,13,985	0/0:45,0:45:51.16:0,51,4556	1/1:10,6:16:14.61:703,15,0	1/1:12,6:18:12.04:647,12,0	1/1:22,5:27:2.76:127,3,0	0/0:23,0:22:15.03:0,15,814	0/1:8,8:16:99:414,0,197	1/1:15,11:27:36.12:2169,36,0	1/1:6,4:10:12.04:751,12,0
chr10	10351336	.	T	TTCTC	1861.18	PASS	AB=0.989;AC=41;AF=0.932;AN=44;BaseQRankSum=-0.086;DP=595;FS=5.619;HRun=0;HaplotypeScore=175.4858;InbreedingCoeff=0.1913;MQ=64.52;MQ0=8;MQRankSum=0.326;QD=3.93;ReadPosRankSum=-0.051;VQSLOD=2.2645;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:32,0:31:5.97:68,6,0	1/1:10,0:10:0.47:1,0,0	./.	./.	1/1:13,3:18:3:70,3,0	1/1:21,0:19:15.12:129,15,0	1/1:41,0:40:15.02:128,15,0	./.	1/1:23,0:21:16.06:102,16,0	1/1:22,0:21:13.36:119,13,0	1/1:25,0:25:3.01:33,3,0	1/1:20,0:20:6:79,6,0	1/1:20,0:20:12.04:170,12,0	1/1:14,0:13:11.41:170,11,0	1/1:21,0:20:3.24:14,3,0	1/1:19,0:19:11.70:162,12,0	0/1:12,0:12:37.36:59,0,37	1/1:18,0:18:12.01:133,12,0	./.	./.	./.	1/1:20,0:18:3.01:30,3,0	0/1:21,0:20:0.09:0,0,0	0/1:27,0:27:0:0,0,0	1/1:20,0:20:8.92:121,9,0	1/1:31,0:29:17.77:146,18,0	1/1:18,0:17:11.48:101,11,0	1/1:19,0:18:12.93:113,13,0
chr10	10351609	.	ACTCAGCACGCCC	A	4803.62	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.986;DP=636;FS=1.230;HRun=0;HaplotypeScore=240.6227;InbreedingCoeff=0.9941;MQ=83.17;MQ0=0;MQRankSum=-10.835;QD=78.75;ReadPosRankSum=1.623;VQSLOD=4.3357;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:93.32:0,93,5303	0/0:6,0:6:18.06:0,18,974	0/0:20,0:20:57.19:0,57,2759	0/0:20,0:20:57.20:0,57,2832	0/0:11,0:11:33.10:0,33,1760	1/1:2,10:12:27.09:1023,27,0	1/1:4,20:24:51.13:1843,51,0	0/0:21,0:21:57.20:0,57,3037	1/1:5,20:25:51.18:1937,51,0	0/0:23,0:23:66.23:0,66,3707	0/0:8,0:8:24.08:0,24,1273	0/0:26,0:26:75.26:0,75,4443	0/0:30,0:30:87.13:0,87,5318	0/0:28,0:28:81.28:0,81,4990	0/0:26,0:26:78.27:0,78,4806	0/0:21,0:21:60.21:0,60,3583	0/0:45,0:45:99:0,123,6997	0/0:34,0:34:96.33:0,96,5392	0/0:19,0:19:54.19:0,54,3094	0/0:11,0:11:30.10:0,30,1737	0/0:63,0:63:99:0,187,11056	0/0:8,0:8:24.08:0,24,1471	0/0:11,0:10:30.10:0,30,1752	0/0:56,0:56:99:0,166,9584	0/0:13,0:13:36.12:0,36,2231	0/0:22,0:22:63.22:0,63,3881	0/0:13,0:13:39.13:0,39,2403	0/0:8,0:8:24.08:0,24,1481
chr10	10352024	.	A	AAGAGAG	4453.61	PASS	AB=0.840;AC=50;AF=0.962;AN=52;BaseQRankSum=-0.631;DP=617;FS=2.600;HRun=0;HaplotypeScore=146.8437;InbreedingCoeff=0.0754;MQ=53.78;MQ0=16;MQRankSum=-0.901;QD=7.73;ReadPosRankSum=-0.126;VQSLOD=3.6922;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:41,0:36:27.48:323,27,0	1/1:3,4:6:3:73,3,0	./.	./.	1/1:18,0:17:9.02:117,9,0	1/1:13,0:21:10.68:110,11,0	1/1:18,0:21:5.97:72,6,0	1/1:26,0:26:19.28:165,19,0	1/1:25,0:22:12.16:155,12,0	1/1:30,0:27:21.63:229,22,0	1/1:10,5:16:4.56:57,5,0	1/1:17,9:27:12.49:204,12,0	1/1:13,7:21:9.03:201,9,0	1/1:21,0:20:12.04:289,12,0	1/1:14,0:23:6.02:82,6,0	1/1:12,8:24:15.05:329,15,0	0/1:9,7:16:15.53:91,0,16	1/1:16,0:15:13.20:139,13,0	1/1:19,0:18:9.45:89,9,0	1/1:20,0:20:5.82:50,6,0	0/1:13,0:13:0:0,0,0	1/1:20,0:19:6.16:145,6,0	1/1:25,1:27:20.87:296,21,0	1/1:13,7:22:17.81:314,18,0	1/1:25,0:24:9:100,9,0	1/1:16,7:25:22:401,22,0	1/1:16,4:25:8.66:266,9,0	1/1:17,0:16:11.97:155,12,0
chr10	10353040	.	CAACTGCCAGTGTCGAAG	C	25470.79	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=15.778;DP=516;FS=13.357;HRun=0;HaplotypeScore=258.0243;InbreedingCoeff=0.9757;MQ=83.62;MQ0=0;MQRankSum=-15.868;QD=93.99;ReadPosRankSum=6.832;VQSLOD=3.0634;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,16:23:33.11:1567,33,0	1/1:2,1:4:6.02:298,6,0	0/0:30,0:30:75.37:0,75,4496	0/0:20,0:19:57.17:0,57,3251	0/0:19,0:19:57.20:0,57,4097	0/0:15,0:15:42.14:0,42,3290	0/0:34,0:34:99:0,99,7591	0/0:16,0:16:48.16:0,48,3042	0/0:26,0:26:78.25:0,78,5394	1/1:4,11:15:33.11:1461,33,0	1/1:3,9:12:21.07:1043,21,0	1/1:2,22:24:57.20:2830,57,0	1/1:2,11:13:33.11:1638,33,0	1/1:1,18:19:48.16:2383,48,0	1/1:5,16:21:42.14:2085,42,0	1/1:6,16:22:42.14:2085,42,0	1/1:12,12:24:21.07:1043,21,0	1/1:4,7:11:15.01:544,15,0	0/0:24,0:24:69.24:0,69,4842	0/0:12,0:12:36.12:0,36,2858	0/0:35,0:35:98.89:0,99,7048	1/1:1,12:13:27.09:1341,27,0	1/1:1,11:12:30.10:1489,30,0	1/1:8,9:17:17.85:893,18,0	0/0:14,0:14:42.14:0,42,3046	1/1:4,17:21:51.16:2308,51,0	1/1:2,14:16:39.13:1865,39,0	1/1:0,4:4:12.04:596,12,0
chr10	10353339	.	A	AGG	4680.39	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=3.846;DP=517;FS=13.905;HRun=6;HaplotypeScore=91.6533;InbreedingCoeff=0.9536;MQ=82.89;MQ0=0;MQRankSum=-7.482;QD=10.57;ReadPosRankSum=3.539;VQSLOD=1.1153;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,0:41:69.75:245,70,0	1/1:0,0:3:4.99:18,5,0	0/0:23,0:22:49.36:0,49,598	0/0:24,0:24:66.16:0,66,768	0/0:16,0:16:45.13:0,45,537	1/1:2,16:17:36.12:609,36,0	1/1:3,21:26:48.16:812,48,0	1/1:6,0:19:31.50:110,31,0	1/1:3,19:22:39.13:658,39,0	1/1:1,0:18:34.93:123,35,0	1/1:1,0:6:15.47:69,15,0	1/1:0,0:11:22.46:79,22,0	1/1:1,0:10:22.46:79,22,0	1/1:1,0:14:29.94:105,30,0	1/1:0,0:24:52.50:185,53,0	1/1:2,0:23:42.42:149,42,0	1/1:4,0:37:67.37:237,67,0	1/1:2,0:14:21.52:74,22,0	1/1:1,0:10:18.54:69,19,0	1/1:1,0:15:30.91:131,31,0	1/1:3,0:27:51.64:182,52,0	1/1:1,0:12:23.67:85,24,0	1/1:0,0:9:22.46:79,22,0	1/1:1,0:29:62.26:219,62,0	0/0:11,0:11:30.09:0,30,366	1/1:1,0:24:49.93:188,50,0	1/1:3,0:21:32.44:115,32,0	1/1:2,0:9:17.47:62,17,0
chr10	10353472	.	GCATA	G	965.70	PASS	AB=0.886;AC=15;AF=0.268;AN=56;BaseQRankSum=3.934;DP=520;FS=40.745;HRun=0;HaplotypeScore=137.5585;InbreedingCoeff=-0.3785;MQ=51.10;MQ0=12;MQRankSum=-2.203;QD=3.82;ReadPosRankSum=-3.245;VQSLOD=-0.1233;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:14,2:16:24.99:25,0,371	0/1:7,3:10:37.47:37,0,382	0/0:27,0:11:33.02:0,33,660	0/0:33,0:12:36.12:0,36,1025	0/0:21,0:21:45.12:0,45,916	0/1:19,0:18:88.55:89,0,456	0/0:25,0:25:50.74:0,51,1191	0/0:25,0:24:72.19:0,72,1703	0/1:12,0:12:60.59:61,0,436	0/0:15,0:17:3.46:0,3,1120	0/0:11,1:12:30.10:0,30,744	0/1:13,3:16:78.34:78,0,564	0/0:9,5:13:17.93:0,18,382	0/0:13,4:17:14.64:0,15,359	0/1:26,3:29:99:156,0,893	0/1:15,2:17:99:114,0,687	0/1:18,1:20:30.65:31,0,502	0/1:3,2:5:50.73:51,0,218	0/1:17,1:17:18.19:18,0,946	0/1:19,0:19:36.91:37,0,862	0/0:15,0:15:33.58:0,34,817	0/0:15,0:15:18.06:0,18,459	0/1:11,0:11:79.93:80,0,345	0/0:15,3:18:17.54:0,18,437	0/0:27,1:27:59.93:0,60,1253	0/1:25,1:26:99:107,0,1519	0/1:19,2:20:99:185,0,758	0/1:5,4:11:54.14:54,0,208
chr10	10353815	.	CT	C	1310.92	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=-0.660;DP=564;FS=5.467;HRun=10;HaplotypeScore=132.2888;InbreedingCoeff=0.3609;MQ=76.28;MQ0=1;MQRankSum=-0.000;QD=6.55;ReadPosRankSum=-5.100;VQSLOD=0.4746;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:94.87:0,95,437	0/0:14,0:14:13.62:0,14,94	0/0:30,0:21:28.33:0,28,252	0/0:18,0:13:18.69:0,19,122	0/0:22,0:22:54.03:0,54,562	0/0:21,0:21:54.61:0,55,588	0/0:17,0:17:42.37:0,42,423	1/1:10,17:27:55.09:425,55,0	0/0:15,0:15:27.06:0,27,288	0/0:14,0:14:6.88:0,7,67	0/0:15,0:15:30.88:0,31,117	0/0:26,1:27:5.80:0,6,172	0/0:15,0:15:10.04:0,10,100	0/1:16,0:16:9.31:9,0,78	0/1:18,0:18:28.39:28,0,82	0/1:14,0:14:18.14:18,0,50	0/0:40,0:40:68.21:0,68,323	0/1:19,0:19:24.98:25,0,80	1/1:8,17:25:56.53:443,57,0	1/1:5,10:15:32.35:238,32,0	1/1:5,9:14:30.75:225,31,0	0/1:15,0:15:12.62:13,0,72	0/1:11,0:11:2.82:3,0,57	0/0:20,0:20:39.34:0,39,152	0/0:16,0:16:36.06:0,36,378	0/1:26,0:26:61.27:61,0,92	0/0:19,0:19:20.69:0,21,134	0/0:9,0:9:21.73:0,22,96
chr10	10354084	.	TCACACACACA	T	562.77	PASS	AC=14;AF=0.280;AN=50;BaseQRankSum=0.933;DP=421;FS=11.992;HRun=0;HaplotypeScore=115.6526;InbreedingCoeff=0.5977;MQ=67.60;MQ0=9;MQRankSum=-2.426;QD=6.40;ReadPosRankSum=-1.077;VQSLOD=1.4991;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:18:9.31:0,9,219	1/1:1,2:3:3.01:88,3,0	./.	0/0:27,0:19:0.89:0,1,2	0/0:7,0:7:6:0,6,61	0/0:11,0:11:6.02:0,6,260	0/0:21,0:21:6.02:0,6,277	0/0:12,0:12:0.47:0,0,1	0/0:12,0:12:9.03:0,9,399	1/1:18,0:16:3:28,3,0	./.	0/0:20,0:20:12.51:0,13,440	0/0:10,0:10:16.87:0,17,578	0/0:12,0:12:9.03:0,9,414	1/1:7,0:7:6.01:63,6,0	1/1:8,1:9:2.83:88,3,0	1/1:19,6:25:6.02:176,6,0	1/1:16,1:17:4.77:106,5,0	0/0:16,0:15:15.05:0,15,492	0/0:11,0:11:6.02:0,6,204	0/0:48,0:47:33.89:0,34,889	0/0:13,0:13:15.05:0,15,649	0/0:14,0:12:8.87:0,9,399	0/0:22,0:22:27.08:0,27,1063	0/0:10,0:11:8.62:0,9,94	./.	1/1:7,1:9:6.02:158,6,0	0/0:1,0:1:3.01:0,3,64
chr10	10354507	.	T	TTAGGG	52511.29	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-8.907;DP=692;FS=0.000;HRun=0;HaplotypeScore=107.0667;InbreedingCoeff=0.9976;MQ=79.78;MQ0=0;MQRankSum=-10.450;QD=81.04;ReadPosRankSum=4.325;VQSLOD=6.7062;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,22:31:63.22:1992,63,0	1/1:5,6:13:30.10:882,30,0	0/0:19,0:19:57.17:0,57,1160	0/0:24,0:25:58.05:0,58,1185	1/1:3,19:24:51.04:1587,51,0	1/1:4,20:25:69.24:2179,69,0	1/1:7,12:21:51.17:1560,51,0	1/1:5,10:17:51.18:1522,51,0	1/1:4,17:21:63.22:2008,63,0	1/1:4,28:35:99:3013,99,0	1/1:3,13:17:45.15:1420,45,0	1/1:9,37:47:99:4173,132,0	1/1:4,26:30:87.30:2756,87,0	1/1:3,22:27:69.24:2187,69,0	1/1:1,21:26:60.21:1937,60,0	1/1:7,20:28:72.25:2262,72,0	1/1:4,28:35:81.28:2553,81,0	1/1:5,11:16:42.14:1319,42,0	1/1:6,10:17:48.10:1280,48,0	1/1:3,21:26:75.26:2335,75,0	1/1:3,25:30:69.24:2159,69,0	1/1:2,22:24:63.22:1966,63,0	1/1:6,21:28:75.26:2392,75,0	1/1:6,17:25:54.06:1721,54,0	1/1:2,17:20:60.21:1902,60,0	1/1:5,23:29:84.29:2599,84,0	1/1:7,19:28:66.23:2130,66,0	1/1:1,6:7:21.07:678,21,0
chr10	10355783	.	AG	A	14406.28	PASS	AB=0.871;AC=54;AF=0.964;AN=56;BaseQRankSum=2.352;DP=487;FS=5.305;HRun=3;HaplotypeScore=353.6599;InbreedingCoeff=-0.0413;MQ=53.39;MQ0=0;MQRankSum=-3.995;QD=29.58;ReadPosRankSum=1.863;VQSLOD=2.5097;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,22:24:45.09:533,45,0	1/1:1,8:9:24.07:295,24,0	0/1:8,1:8:47.57:63,0,48	0/1:13,3:13:99:129,0,103	1/1:1,12:13:29.96:330,30,0	1/1:1,12:13:36.11:445,36,0	1/1:0,21:21:60.13:717,60,0	1/1:2,22:24:63.20:780,63,0	1/1:1,32:33:93.29:1142,93,0	1/1:0,23:23:66.21:814,66,0	1/1:0,3:3:5.97:56,6,0	1/1:0,18:18:51.16:626,51,0	1/1:0,21:22:60.09:703,60,0	1/1:2,28:30:75.23:919,75,0	1/1:0,28:28:84.09:1011,84,0	1/1:1,15:16:45.14:548,45,0	1/1:1,18:19:41.97:463,42,0	1/1:1,10:11:30.09:371,30,0	1/1:2,12:14:33.10:408,33,0	1/1:0,15:15:41.99:473,42,0	1/1:0,17:17:29.99:335,30,0	1/1:1,12:13:33.10:407,33,0	1/1:1,10:11:29.93:315,30,0	1/1:1,20:21:33.65:465,34,0	1/1:1,19:20:54:612,54,0	1/1:1,21:22:57.18:703,57,0	1/1:0,15:15:39.12:482,39,0	1/1:0,7:7:21.07:260,21,0
chr10	10355791	.	AG	A	8238.97	PASS	AB=0.917;AC=53;AF=0.946;AN=56;BaseQRankSum=3.381;DP=486;FS=1.522;HRun=4;HaplotypeScore=383.7443;InbreedingCoeff=0.5684;MQ=48.05;MQ0=0;MQRankSum=-4.530;QD=17.24;ReadPosRankSum=2.879;VQSLOD=2.1399;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,23:24:38.82:299,39,0	1/1:4,4:8:11.97:95,12,0	0/0:8,0:7:14.40:0,14,136	0/1:10,1:8:23.98:28,0,24	1/1:2,10:12:23.84:175,24,0	1/1:1,11:12:32.80:247,33,0	1/1:3,20:23:59.70:455,60,0	1/1:7,20:27:56.97:488,57,0	1/1:4,29:34:86.32:651,86,0	1/1:4,20:24:59.77:497,60,0	1/1:2,2:4:5.98:47,6,0	1/1:2,17:19:47.64:352,48,0	1/1:3,18:21:50.78:391,51,0	1/1:1,25:26:65.31:485,65,0	1/1:6,22:28:68.01:505,68,0	1/1:4,11:15:32.81:248,33,0	1/1:3,17:20:44.84:351,45,0	1/1:1,10:11:26.98:230,27,0	1/1:4,12:16:29.98:255,30,0	1/1:4,13:17:38.25:290,38,0	1/1:2,17:19:32.83:249,33,0	1/1:2,11:13:34.89:258,35,0	1/1:5,5:10:17.91:135,18,0	1/1:1,21:22:41.48:306,41,0	1/1:5,15:20:44.83:347,45,0	1/1:3,17:20:44.92:369,45,0	1/1:1,14:15:38.90:314,39,0	1/1:0,7:7:20.97:172,21,0
chr10	10355793	.	GGGT	G	18097.86	PASS	AB=1.000;AC=53;AF=0.946;AN=56;BaseQRankSum=1.978;DP=475;FS=0.000;HRun=0;HaplotypeScore=359.0811;InbreedingCoeff=0.5579;MQ=49.63;MQ0=0;MQRankSum=-4.188;QD=38.84;ReadPosRankSum=2.527;VQSLOD=4.1097;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:24:39.13:662,39,0	1/1:8,0:8:12.04:204,12,0	0/0:9,0:8:10.46:0,10,170	0/1:10,0:7:16.06:16,0,23	1/1:12,0:12:24.08:406,24,0	1/1:12,0:12:33.11:559,33,0	1/1:23,0:23:60.21:1019,60,0	1/1:27,0:27:57.20:962,57,0	1/1:34,0:34:87.30:1473,87,0	1/1:22,0:22:60.20:1002,60,0	1/1:3,0:3:6.02:102,6,0	1/1:19,0:19:48.16:815,48,0	1/1:19,1:20:54.18:892,54,0	1/1:26,0:26:66.23:1118,66,0	1/1:25,1:26:72.19:1189,72,0	1/1:12,0:12:33.11:560,33,0	1/1:20,0:20:45.15:762,45,0	1/1:11,0:11:27.09:457,27,0	1/1:15,0:15:30.10:507,30,0	1/1:15,1:16:39.13:661,39,0	1/1:19,0:19:33.11:559,33,0	1/1:12,1:13:36.12:610,36,0	1/1:10,0:10:18.06:304,18,0	1/1:22,0:22:44.06:713,44,0	1/1:20,0:20:45.15:764,45,0	1/1:20,0:20:45.15:764,45,0	1/1:15,0:15:39.13:662,39,0	1/1:7,0:7:21.07:356,21,0
chr10	10355796	.	TGG	T	11811.64	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=4.041;DP=416;FS=6.082;HRun=4;HaplotypeScore=342.0343;InbreedingCoeff=0.7470;MQ=50.26;MQ0=0;MQRankSum=-4.523;QD=29.60;ReadPosRankSum=3.743;VQSLOD=2.0514;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,23:23:42.04:445,42,0	1/1:0,4:4:12.03:135,12,0	0/0:7,0:6:2.51:0,3,133	0/0:9,0:7:5.37:0,5,49	1/1:0,10:10:24.06:257,24,0	1/1:0,11:11:33.08:356,33,0	1/1:0,20:20:60.15:653,60,0	1/1:0,20:20:57.17:674,57,0	1/1:0,29:30:87.21:945,87,0	1/1:0,20:20:60.09:668,60,0	1/1:0,2:2:6.02:66,6,0	1/1:0,17:17:48.11:509,48,0	1/1:1,19:20:54.15:600,54,0	1/1:0,25:25:66.15:707,66,0	1/1:1,23:24:72.08:767,72,0	1/1:0,11:11:33.08:357,33,0	1/1:0,17:17:45.12:501,45,0	1/1:0,10:10:27.08:319,27,0	1/1:0,12:12:30.09:354,30,0	1/1:1,12:14:39:412,39,0	1/1:0,17:17:33.09:357,33,0	1/1:1,11:12:35.88:370,36,0	1/1:0,5:6:18.04:192,18,0	1/1:0,21:21:45.04:475,45,0	1/1:0,15:15:45.12:496,45,0	1/1:0,17:17:45.13:515,45,0	1/1:0,14:14:39.11:443,39,0	1/1:0,7:7:21.06:241,21,0
chr10	10362054	.	T	TCA	2311.19	PASS	AB=0.773;AC=36;AF=0.692;AN=52;BaseQRankSum=-1.076;DP=660;FS=9.779;HRun=0;HaplotypeScore=123.1329;InbreedingCoeff=0.2472;MQ=57.72;MQ0=10;MQRankSum=0.595;QD=4.19;ReadPosRankSum=-2.024;VQSLOD=1.7837;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:42,0:42:9.08:90,9,0	0/1:4,0:4:0:0,0,0	./.	0/1:38,0:23:0:0,0,0	0/0:7,0:13:5.68:0,6,28	0/0:15,0:15:17.07:0,17,169	0/1:16,8:26:69.23:77,0,69	1/1:21,0:20:9.50:42,10,0	0/1:15,13:32:99:402,0,112	1/1:24,0:24:4.83:78,5,0	./.	1/1:19,0:19:5.94:77,6,0	1/1:16,0:15:2.10:39,2,0	0/1:9,0:23:9.25:38,0,9	1/1:9,0:22:3:26,3,0	0/1:8,0:24:23.65:43,0,24	1/1:25,0:25:17.15:111,17,0	1/1:27,0:25:5.50:31,6,0	1/1:10,10:20:2.69:360,3,0	0/0:12,5:18:2.76:0,3,33	0/1:52,7:56:99:575,0,113	1/1:23,0:22:13.88:103,14,0	1/1:18,0:18:8.99:75,9,0	0/1:14,1:35:0:0,0,0	0/0:9,0:22:25.34:0,25,135	1/1:30,0:30:22.10:139,22,0	1/1:11,0:10:8.40:39,8,0	1/1:12,0:11:14.41:116,14,0
chr10	10364337	.	TG	T	6678.69	PASS	AB=1.000;AC=47;AF=0.839;AN=56;BaseQRankSum=10.422;DP=522;FS=3.683;HRun=4;HaplotypeScore=341.7988;InbreedingCoeff=0.2607;MQ=45.92;MQ0=1;MQRankSum=-5.856;QD=13.15;ReadPosRankSum=8.358;VQSLOD=2.0953;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:29:16.96:259,17,0	1/1:12,1:13:34.86:231,35,0	0/0:6,0:6:10.02:0,10,105	0/0:8,0:6:2.87:0,3,77	1/1:15,0:15:35.12:220,35,0	1/1:16,0:16:16.30:210,16,0	1/1:26,0:26:24.92:343,25,0	0/1:21,0:21:57.10:154,0,57	0/1:19,0:19:10.24:203,0,10	1/1:30,0:30:20.29:394,20,0	1/1:15,1:16:38.04:232,38,0	1/1:24,0:24:49.79:384,50,0	1/1:21,0:21:17.19:294,17,0	1/1:27,0:27:75.83:464,76,0	0/1:24,0:24:2.85:295,0,3	1/1:22,0:22:34.85:327,35,0	1/1:20,0:20:49.13:297,49,0	0/1:16,0:16:18.90:157,0,19	0/1:17,0:17:22.29:160,0,22	1/1:21,1:22:52.81:355,53,0	1/1:24,0:24:9.95:251,10,0	1/1:15,1:16:47.26:320,47,0	1/1:12,0:12:26.01:157,26,0	1/1:12,0:12:17.11:99,17,0	1/1:19,0:19:22.24:249,22,0	1/1:25,0:25:9.58:297,10,0	1/1:16,0:16:40.46:231,40,0	1/1:6,0:6:17.28:96,17,0
chr10	10364341	.	GC	G	15475	PASS	AB=0.733;AC=54;AF=0.964;AN=56;BaseQRankSum=0.184;DP=514;FS=7.202;HRun=3;HaplotypeScore=317.8411;InbreedingCoeff=-0.0372;MQ=43.43;MQ0=1;MQRankSum=-2.607;QD=30.11;ReadPosRankSum=1.843;VQSLOD=2.6329;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,22:29:58.09:664,58,0	1/1:1,12:13:36.11:434,36,0	0/1:2,2:4:24.13:43,0,24	0/1:6,2:6:16.90:81,0,17	1/1:2,12:14:36.11:435,36,0	1/1:2,14:16:39.12:480,39,0	1/1:3,21:24:69.20:829,69,0	1/1:6,12:18:42.08:491,42,0	1/1:3,15:18:45.14:539,45,0	1/1:4,27:31:81.12:972,81,0	1/1:3,14:17:39.11:457,39,0	1/1:1,22:23:66.21:811,66,0	1/1:3,17:21:57.14:681,57,0	1/1:3,26:29:84.13:990,84,0	1/1:6,19:25:69.07:784,69,0	1/1:3,19:22:63.18:756,63,0	1/1:0,19:19:51.15:625,51,0	1/1:2,12:14:36.11:443,36,0	1/1:3,13:16:36.11:444,36,0	1/1:6,17:23:57.16:679,57,0	1/1:5,17:22:57.11:646,57,0	1/1:3,15:18:48.15:584,48,0	1/1:2,10:12:30.08:349,30,0	1/1:4,8:12:18:216,18,0	1/1:4,16:20:45.14:547,45,0	1/1:3,22:25:66.03:760,66,0	1/1:1,14:15:42.13:514,42,0	1/1:0,6:6:18.06:222,18,0
chr10	10365076	.	CAT	C	441.54	PASS	AB=0.783;AC=10;AF=0.179;AN=56;BaseQRankSum=8.546;DP=598;FS=9.198;HRun=0;HaplotypeScore=159.1931;InbreedingCoeff=-0.2381;MQ=51.17;MQ0=6;MQRankSum=-3.662;QD=2.23;ReadPosRankSum=-0.584;VQSLOD=1.7780;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,3:29:30.15:0,30,831	0/1:6,2:8:2.98:3,0,254	0/0:27,0:22:63:0,63,882	0/0:28,0:22:54.53:0,55,812	0/0:13,0:13:30.07:0,30,485	0/0:18,7:25:21.90:0,22,650	0/0:17,4:21:4.16:0,4,466	0/0:24,0:23:53.92:0,54,984	0/1:22,7:29:16.22:16,0,664	0/1:25,7:32:99:213,0,1027	0/1:12,2:14:13.91:14,0,488	0/0:20,5:25:54.16:0,54,948	0/1:12,7:19:20.14:20,0,503	0/1:16,6:22:61.89:62,0,409	0/0:17,6:23:30.03:0,30,512	0/0:14,8:21:30.06:0,30,513	0/0:13,0:13:4.02:0,4,295	0/0:14,0:14:1.55:0,2,582	0/0:15,0:15:45.10:0,45,728	0/0:27,0:27:80.88:0,81,1387	0/0:42,0:42:99:0,114,2074	0/0:14,8:22:17.13:0,17,637	0/0:15,4:19:5.94:0,6,476	0/1:21,5:26:39.30:39,0,419	0/0:11,0:11:33.11:0,33,589	0/1:13,9:22:99:174,0,567	0/1:15,5:20:20.20:20,0,583	0/1:3,3:6:17.09:17,0,103
chr10	10365082	.	CAA	C	861.03	PASS	AB=0.809;AC=16;AF=0.286;AN=56;BaseQRankSum=6.480;DP=604;FS=1.539;HRun=3;HaplotypeScore=166.7597;InbreedingCoeff=-0.4113;MQ=51.16;MQ0=5;MQRankSum=0.386;QD=2.57;ReadPosRankSum=-0.670;VQSLOD=-0.6862;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:25,3:28:20.44:20,0,235	0/1:7,2:9:4.39:4,0,89	0/0:25,0:20:30.16:0,30,510	0/0:27,0:21:42.42:0,42,566	0/0:10,0:10:23.87:0,24,215	0/0:16,7:23:21.87:0,22,270	0/1:17,3:21:33.05:33,0,166	0/0:23,0:22:57.13:0,57,841	0/1:20,7:27:24.01:24,0,255	0/1:28,7:36:99:303,0,347	0/1:14,2:16:39.37:39,0,167	0/0:21,4:26:4.68:0,5,286	0/1:12,6:19:23.40:23,0,171	0/1:15,6:21:87.80:88,0,110	0/0:17,6:23:26.73:0,27,195	0/1:15,8:23:41.99:42,0,128	0/1:12,0:12:14.54:15,0,96	0/0:16,0:16:2.03:0,2,202	0/0:13,0:13:23.28:0,23,642	0/0:26,0:26:77.59:0,78,1327	0/0:45,0:45:99:0,123,1993	0/1:16,7:24:43.15:43,0,189	0/1:18,3:22:44.05:44,0,129	0/1:21,5:26:45.31:45,0,121	0/0:12,0:12:29.07:0,29,248	0/1:14,9:23:99:204,0,168	0/1:17,5:22:70.89:71,0,177	0/1:3,3:6:16.96:17,0,37
chr10	10365146	.	AAG	A	1386.23	PASS	AB=0.798;AC=13;AF=0.232;AN=56;BaseQRankSum=5.742;DP=870;FS=9.002;HRun=0;HaplotypeScore=342.6966;InbreedingCoeff=-0.2926;MQ=46.87;MQ0=9;MQRankSum=-7.371;QD=3.77;ReadPosRankSum=-1.051;VQSLOD=1.1057;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:42,11:53:22.24:0,22,583	0/1:19,4:23:11.41:11,0,588	0/0:47,0:22:37.67:0,38,530	0/0:30,0:21:26.65:0,27,579	0/0:23,0:27:3:0,3,49	0/1:25,1:26:10.19:10,0,363	0/0:51,0:51:99:0,114,1792	0/0:26,0:26:29.03:0,29,841	0/0:36,0:36:15.24:0,15,403	0/1:25,19:45:99:602,0,594	0/1:17,5:23:20.32:20,0,423	0/1:21,8:29:28.52:29,0,566	0/1:23,10:34:95.45:95,0,544	0/0:26,8:34:51.12:0,51,766	0/1:30,10:41:0.63:1,0,500	0/1:26,8:34:99:99,0,532	0/1:15,6:20:77.67:78,0,346	0/1:16,2:18:3.82:4,0,638	0/0:11,0:10:18.03:0,18,262	0/0:20,0:19:27.09:0,27,436	0/0:49,0:47:70.68:0,71,1378	0/0:20,9:29:36.10:0,36,560	0/0:17,10:27:20.89:0,21,296	0/0:28,9:37:27.09:0,27,440	0/0:17,0:25:6.02:0,6,98	0/1:20,10:30:99:291,0,616	0/1:19,11:30:99:172,0,674	0/1:10,4:14:99:118,0,184
chr10	10365164	.	CGCACAT	C	169.27	PASS	AB=0.674;AC=1;AF=0.018;AN=56;BaseQRankSum=1.018;DP=830;FS=0.000;HRun=0;HaplotypeScore=364.6541;InbreedingCoeff=-0.0306;MQ=47.78;MQ0=6;MQRankSum=-2.270;QD=5.46;ReadPosRankSum=-2.510;VQSLOD=0.9984;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:40.91:0,41,746	0/0:26,0:26:53.05:0,53,877	0/0:39,0:19:20.89:0,21,621	0/0:34,0:21:40.29:0,40,820	0/0:31,0:31:2.21:0,2,25	0/0:22,0:22:36.01:0,36,1053	0/0:57,0:57:99:0,113,2858	0/0:20,0:20:57.14:0,57,1249	0/1:16,15:31:99:244,0,275	0/0:39,0:39:98.05:0,98,1876	0/0:21,0:21:35:0,35,555	0/0:28,0:28:47.06:0,47,851	0/0:28,0:28:47.57:0,48,887	0/0:31,0:31:47.34:0,47,768	0/0:36,0:36:38.57:0,39,814	0/0:25,0:25:54:0,54,1076	0/0:23,0:22:35.86:0,36,571	0/0:20,0:20:53.55:0,54,870	0/0:13,0:13:30.08:0,30,828	0/0:9,0:8:21.06:0,21,644	0/0:48,0:45:97.75:0,98,2879	0/0:27,0:27:35.58:0,36,520	0/0:32,0:32:14.08:0,14,234	0/0:38,0:38:23.13:0,23,414	0/0:25,0:25:2.58:0,3,69	0/0:30,0:30:86.86:0,87,1529	0/0:31,0:31:77.28:0,77,1174	0/0:12,0:12:35.80:0,36,564
chr10	10365182	.	CACACAGAGAG	C	1868.07	PASS	AB=0.929;AC=31;AF=0.554;AN=56;BaseQRankSum=8.365;DP=729;FS=5.508;HRun=0;HaplotypeScore=345.8235;InbreedingCoeff=0.4158;MQ=45.72;MQ0=9;MQRankSum=-5.922;QD=4.02;ReadPosRankSum=5.441;VQSLOD=1.1006;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:47,0:47:41.76:109,0,42	1/1:24,0:23:0.27:118,0,0	0/0:29,0:11:26.44:0,26,410	0/0:24,0:10:24.41:0,24,179	0/1:14,16:31:0.19:0,0,1	0/0:26,0:26:33.11:0,33,614	0/0:51,0:51:67.59:0,68,1108	0/0:12,0:12:36.12:0,36,625	1/1:26,0:26:9.87:117,10,0	1/1:36,0:35:1.46:235,1,0	0/1:17,0:17:13.13:109,0,13	1/1:26,0:26:1.87:58,2,0	0/1:27,0:26:27.57:96,0,28	1/1:27,0:27:6.67:160,7,0	0/0:29,0:29:0.33:0,0,3	1/1:21,0:21:3.56:34,4,0	1/1:21,0:20:4.33:67,4,0	1/1:19,0:18:5.96:119,6,0	0/0:8,0:8:21.07:0,21,423	0/0:10,0:9:18.06:0,18,312	0/0:46,0:43:83.69:0,84,2279	1/1:22,0:22:8.49:119,8,0	1/1:26,0:26:5.99:91,6,0	1/1:29,0:28:3.32:17,3,0	0/0:15,13:28:0:0,0,0	1/1:28,0:28:3.36:261,3,0	1/1:26,0:26:11.32:156,11,0	0/1:12,0:12:4.21:175,0,4
chr10	10365184	.	CACAGAGAGAGAGAGAGAGAGAGAGAG	C	12080.37	PASS	AB=0.976;AC=36;AF=0.643;AN=56;BaseQRankSum=4.613;DP=718;FS=1.421;HRun=0;HaplotypeScore=435.8545;InbreedingCoeff=0.6243;MQ=44.55;MQ0=9;MQRankSum=-4.558;QD=22.75;ReadPosRankSum=2.840;VQSLOD=1.9281;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:42,5:47:99:588,0,128	1/1:21,3:23:47.64:814,48,0	0/0:28,0:10:23.38:0,23,450	0/1:22,0:8:6.39:6,0,34	0/0:31,0:31:0.76:0,1,1	0/0:27,0:27:33.51:0,34,1499	0/1:50,0:50:82.68:83,0,2329	0/0:13,0:13:39.07:0,39,1402	0/1:26,0:26:91.68:92,0,730	1/1:29,3:32:92.54:1498,93,0	1/1:14,3:17:23.92:760,24,0	1/1:22,3:25:38.39:530,38,0	1/1:25,2:26:46.23:684,46,0	1/1:21,5:27:38.18:883,38,0	1/1:26,2:28:29.31:271,29,0	1/1:20,1:22:44.21:463,44,0	1/1:19,2:20:24.63:382,25,0	1/1:17,2:18:47.15:779,47,0	0/0:7,0:7:17.96:0,18,466	0/0:11,0:10:21.03:0,21,878	0/0:42,0:39:80.43:0,80,4693	1/1:16,5:22:20.61:509,21,0	1/1:16,7:26:9.43:387,9,0	1/1:28,1:28:17.72:208,18,0	0/0:28,0:27:0:0,0,0	1/1:24,4:28:74.83:1368,75,0	1/1:23,2:26:59.21:978,59,0	1/1:9,3:12:34.72:798,35,0
chr10	10365186	.	CAGAG	C	966.84	PASS	AB=1.000;AC=36;AF=0.692;AN=52;BaseQRankSum=5.358;DP=721;FS=10.836;HRun=0;HaplotypeScore=299.2509;InbreedingCoeff=0.4515;MQ=44.20;MQ0=9;MQRankSum=-3.127;QD=1.92;ReadPosRankSum=1.684;VQSLOD=0.8975;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:47,0:47:12.46:36,0,12	1/1:23,0:22:5.99:51,6,0	./.	./.	0/1:31,0:31:0.12:0,0,0	1/1:16,9:27:5.53:92,6,0	1/1:41,7:49:8.89:127,9,0	0/0:19,0:19:21.07:0,21,277	1/1:24,2:26:8.95:125,9,0	1/1:32,0:31:11.95:102,12,0	1/1:17,0:17:5.97:44,6,0	1/1:25,0:25:2.62:22,3,0	1/1:26,0:25:5.62:42,6,0	1/1:26,0:26:6.68:52,7,0	0/0:28,0:28:0:0,0,0	1/1:22,0:22:0.45:1,0,0	1/1:21,0:20:2.81:27,3,0	1/1:19,0:18:6:54,6,0	0/0:9,0:9:6.01:0,6,85	0/0:14,0:12:3.01:0,3,50	0/0:42,0:40:30.08:0,30,552	1/1:22,0:22:5.90:40,6,0	1/1:26,0:26:4.51:23,5,0	0/0:29,0:28:0:0,0,0	0/0:28,0:27:0:0,0,0	1/1:26,0:26:12.01:111,12,0	1/1:25,0:26:8.55:70,9,0	1/1:12,0:12:9.01:84,9,0
chr10	10365207	.	A	AC	775.84	PASS	AB=0.990;AC=21;AF=0.375;AN=56;BaseQRankSum=5.174;DP=388;FS=0.000;HRun=0;HaplotypeScore=133.3659;InbreedingCoeff=0.3296;MQ=42.86;MQ0=16;MQRankSum=-2.155;QD=7.32;ReadPosRankSum=2.276;VQSLOD=3.1440;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:12,0:11:17.09:74,0,17	1/1:5,1:5:4.17:105,4,0	0/0:9,0:4:8.76:0,9,95	0/0:18,0:6:2.80:0,3,41	0/0:34,0:33:11.90:0,12,148	0/0:21,0:21:29.87:0,30,348	0/0:26,0:24:44.90:0,45,551	0/0:25,0:25:67.76:0,68,901	0/0:17,0:17:20.84:0,21,200	0/1:8,0:7:8.82:28,0,9	1/1:3,1:4:11.99:144,12,0	0/1:7,0:6:6.11:51,0,6	1/1:4,0:3:5.38:43,5,0	0/1:10,0:10:3.72:127,0,4	1/1:5,0:4:3.01:43,3,0	1/1:5,1:6:2.84:30,3,0	0/0:6,0:6:5.23:0,5,47	1/1:5,1:6:0.17:71,0,0	0/0:14,0:14:39.13:0,39,534	0/0:14,0:12:15.05:0,15,203	0/0:56,0:53:78.04:0,78,1036	0/1:9,0:8:7.22:74,0,7	1/1:10,0:10:6.01:73,6,0	0/1:12,1:12:24.14:30,0,24	0/0:31,0:30:17.30:0,17,249	0/0:6,0:6:11.78:0,12,45	0/1:6,0:6:3.29:51,0,3	0/0:5,0:4:7.55:0,8,24
chr10	10365248	.	AAC	A	7616.27	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=11.125;DP=680;FS=13.176;HRun=0;HaplotypeScore=179.2749;InbreedingCoeff=0.9984;MQ=54.47;MQ0=6;MQRankSum=-2.797;QD=21.45;ReadPosRankSum=-1.384;VQSLOD=4.2530;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,28:34:65.81:667,66,0	1/1:2,12:13:27.01:303,27,0	0/0:41,0:27:30.14:0,30,701	0/0:34,0:23:36.51:0,37,482	0/0:23,0:23:45.02:0,45,702	0/0:20,0:20:29.53:0,30,470	0/0:24,0:24:63.20:0,63,963	0/0:28,0:27:57.18:0,57,917	0/0:24,0:24:63.21:0,63,952	1/1:3,20:24:59.98:699,60,0	1/1:3,9:12:26.85:247,27,0	1/1:4,20:24:50.67:513,51,0	1/1:4,14:17:36:396,36,0	1/1:2,17:19:35.68:313,36,0	1/1:3,21:21:47.75:426,48,0	1/1:2,16:18:33:363,33,0	1/1:4,20:23:45.06:527,45,0	1/1:2,14:16:42.13:525,42,0	0/0:15,0:15:33.58:0,34,535	0/0:22,1:22:19.69:0,20,792	0/0:61,5:66:99:0,134,2284	1/1:5,17:22:47.71:424,48,0	1/1:8,20:28:42.19:367,42,0	1/1:4,28:32:53.72:535,54,0	0/0:26,0:25:51.17:0,51,817	1/1:4,16:21:50.94:582,51,0	1/1:2,13:15:33.06:395,33,0	1/1:1,9:10:27.09:335,27,0
chr10	10365574	.	GA	G	7114.92	PASS	AB=0.784;AC=44;AF=0.786;AN=56;BaseQRankSum=5.874;DP=545;FS=5.680;HRun=11;HaplotypeScore=63.0506;InbreedingCoeff=0.7258;MQ=72.49;MQ0=0;MQRankSum=-0.508;QD=16.06;ReadPosRankSum=7.572;VQSLOD=5.1458;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:6,27:33:77.88:639,78,0	1/1:2,10:12:29.97:246,30,0	0/0:16,0:13:17.95:0,18,161	0/1:6,0:6:7.08:7,0,95	1/1:2,0:23:36.65:106,37,0	1/1:3,23:26:59.91:492,60,0	1/1:2,17:20:37.98:301,38,0	0/0:37,2:39:52.89:0,53,929	1/1:4,13:17:35.94:296,36,0	1/1:6,10:16:26.93:219,27,0	1/1:0,13:14:40.99:326,41,0	1/1:3,19:23:27.20:417,27,0	1/1:4,15:20:40.98:326,41,0	1/1:1,14:16:43.99:351,44,0	1/1:4,13:18:40.98:326,41,0	1/1:2,7:9:14.97:123,15,0	1/1:7,16:23:47.92:394,48,0	1/1:2,23:25:36.93:510,37,0	0/0:17,1:21:31.98:0,32,485	0/0:13,0:12:30.44:0,30,276	0/0:12,1:13:2.41:0,2,225	0/1:6,18:25:7.96:343,0,8	1/1:5,15:20:14.22:270,14,0	1/1:2,20:22:59.92:493,60,0	1/1:3,0:17:18.33:53,18,0	1/1:9,11:20:31.27:268,31,0	1/1:4,21:25:47.82:394,48,0	1/1:2,10:12:0.97:214,1,0
chr10	10365832	.	C	CGTGT	1814.32	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-6.722;DP=749;FS=10.278;HRun=0;HaplotypeScore=126.8095;InbreedingCoeff=0.9997;MQ=62.32;MQ0=3;MQRankSum=0.548;QD=31.28;ReadPosRankSum=4.222;VQSLOD=3.3340;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,123,1905	0/0:16,0:16:45.08:0,45,735	0/0:32,0:24:50.16:0,50,516	0/0:40,0:35:79.72:0,80,1104	1/1:2,28:31:36.03:969,36,0	0/0:22,0:22:60.15:0,60,993	0/0:37,0:37:99:0,105,1488	0/0:29,0:29:69.05:0,69,1027	0/0:22,0:22:53.95:0,54,746	0/0:28,0:28:69.26:0,69,1099	0/0:17,0:17:45.12:0,45,794	0/0:28,0:28:81.11:0,81,1251	0/0:19,0:19:50.94:0,51,718	0/0:24,0:24:69.16:0,69,1168	0/0:23,0:23:63.06:0,63,958	0/0:19,0:19:57.07:0,57,837	0/0:22,0:22:63.01:0,63,890	0/0:23,0:23:63.01:0,63,1032	0/0:16,0:14:38.96:0,39,440	0/0:17,0:17:48.05:0,48,750	0/0:58,0:58:99:0,165,2450	0/0:25,0:25:63.01:0,63,1009	0/0:22,0:22:57.17:0,57,998	0/0:41,0:41:99:0,117,1812	1/1:3,24:27:36.12:967,36,0	0/0:30,0:30:87.08:0,87,1320	0/0:20,0:20:57.04:0,57,935	0/0:14,0:13:36.07:0,36,562
chr10	10366366	.	A	AC	12175.66	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=-14.252;DP=608;FS=4.564;HRun=3;HaplotypeScore=52.5138;InbreedingCoeff=0.9995;MQ=82.31;MQ0=0;MQRankSum=-2.201;QD=37.46;ReadPosRankSum=2.449;VQSLOD=5.3152;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,111,1330	1/1:1,14:15:39.13:546,39,0	0/0:22,0:21:57.17:0,57,677	0/0:12,0:12:25.70:0,26,314	0/0:29,0:29:81.25:0,81,972	0/0:23,0:23:69.21:0,69,828	0/0:19,0:19:54.15:0,54,635	0/0:27,0:27:78.23:0,78,925	0/0:23,0:23:69.20:0,69,814	1/1:1,23:24:66.21:903,66,0	1/1:3,25:28:72.24:1007,72,0	1/1:1,20:21:60.20:840,60,0	1/1:1,24:25:72.24:1008,72,0	1/1:1,16:17:42.14:588,42,0	1/1:0,27:27:78.26:1092,78,0	1/1:0,8:7:24.08:336,24,0	1/1:2,15:17:45.15:630,45,0	1/1:2,12:14:36.12:504,36,0	0/0:25,0:25:69.20:0,69,817	0/0:27,0:27:72.22:0,72,863	0/0:18,0:18:54.17:0,54,647	1/1:1,20:21:60.20:840,60,0	1/1:0,19:19:48.16:671,48,0	1/1:2,16:18:45.15:630,45,0	0/0:19,0:19:57.17:0,57,684	1/1:0,29:29:87.26:1198,87,0	1/1:3,22:25:63.21:878,63,0	1/1:2,15:17:36.12:504,36,0
chr10	10366905	.	G	GGTTT	20149.80	PASS	AB=0.729;AC=39;AF=0.696;AN=56;BaseQRankSum=-13.081;DP=856;FS=5.681;HRun=0;HaplotypeScore=132.3874;InbreedingCoeff=0.7087;MQ=61.83;MQ0=1;MQRankSum=2.262;QD=31.39;ReadPosRankSum=2.346;VQSLOD=4.7568;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:24,21:47:60.21:1431,60,0	1/1:3,12:16:37.33:814,37,0	0/0:37,0:35:14.75:0,15,140	0/0:37,0:33:38.93:0,39,524	0/1:43,0:42:31.96:32,0,275	0/1:7,20:27:14.92:687,0,15	1/1:12,11:23:20.78:503,21,0	0/0:27,0:27:39.10:0,39,542	1/1:10,21:33:54.19:1286,54,0	1/1:16,14:31:42.11:896,42,0	1/1:9,11:20:24:489,24,0	1/1:11,19:32:9.17:1244,9,0	1/1:16,16:31:33.11:759,33,0	1/1:6,17:23:42.10:950,42,0	1/1:8,25:34:51.18:1225,51,0	1/1:9,25:34:53.24:1570,53,0	1/1:10,33:43:68.50:1723,69,0	0/1:12,20:33:60.13:889,0,60	0/0:27,0:27:36.10:0,36,513	0/0:20,0:20:34.26:0,34,549	0/0:27,0:27:54.15:0,54,817	1/1:14,9:25:30.02:601,30,0	1/1:7,10:17:15.05:360,15,0	1/1:15,26:44:60.21:1441,60,0	0/0:39,0:39:19.33:0,19,606	1/1:16,14:30:3.10:905,3,0	1/1:7,26:34:60.03:1407,60,0	1/1:7,14:21:39.13:936,39,0
chr10	10367517	.	TA	T	2548.46	PASS	AB=0.686;AC=29;AF=0.518;AN=56;BaseQRankSum=2.351;DP=516;FS=0.404;HRun=15;HaplotypeScore=74.4408;InbreedingCoeff=0.3863;MQ=73.54;MQ0=1;MQRankSum=2.186;QD=8.38;ReadPosRankSum=5.581;VQSLOD=2.9448;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:8,16:25:3.99:209,0,4	1/1:1,5:6:11.76:77,12,0	0/0:27,0:15:3.64:0,4,38	0/1:16,0:14:2.72:3,0,41	0/0:31,0:31:35.26:0,35,203	0/0:23,0:23:44.02:0,44,372	0/0:14,2:16:13.65:0,14,232	0/0:23,0:28:49.73:0,50,418	0/0:15,1:18:23.62:0,24,294	0/1:11,14:25:14.52:168,0,15	1/1:10,10:22:25.55:207,26,0	0/1:2,7:9:5.88:78,0,6	0/1:3,11:14:23.07:124,0,23	1/1:1,11:12:26.58:173,27,0	1/1:5,14:19:12.77:189,13,0	1/1:4,7:11:17.69:115,18,0	1/1:5,12:17:9.06:185,9,0	1/1:1,12:13:32.52:211,33,0	0/0:13,0:13:16.66:0,17,124	0/0:34,1:36:63.19:0,63,594	0/1:8,1:9:4.28:4,0,88	1/1:8,10:18:23.50:154,24,0	1/1:8,11:20:2.99:125,3,0	0/1:5,8:13:33.87:121,0,34	0/0:19,0:19:30.82:0,31,174	0/1:8,10:19:21.30:126,0,21	1/1:3,20:25:60.20:377,60,0	0/1:5,5:10:5.65:94,0,6
chr10	10367532	.	A	AC	676.46	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=3.574;DP=517;FS=2.698;HRun=1;HaplotypeScore=81.3504;InbreedingCoeff=0.9708;MQ=70.59;MQ0=0;MQRankSum=-2.062;QD=14.39;ReadPosRankSum=-0.984;VQSLOD=2.8417;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:52.13:0,52,396	0/0:7,0:7:17.78:0,18,124	0/0:21,0:13:16.80:0,17,149	0/0:17,0:16:12.29:0,12,236	1/1:19,3:23:45.86:327,46,0	0/0:21,0:21:60.04:0,60,663	0/0:16,0:16:37.56:0,38,384	0/0:26,0:26:68.58:0,69,729	0/0:17,0:17:41.72:0,42,439	0/0:25,0:25:56.30:0,56,411	0/0:21,0:21:53.93:0,54,378	0/0:10,0:10:23.76:0,24,168	0/0:14,0:14:29.47:0,29,199	0/0:13,0:13:32.57:0,33,213	0/0:20,0:20:50.47:0,50,367	0/0:11,0:11:29.62:0,30,204	0/0:21,0:21:53.36:0,53,384	0/0:18,0:17:50.28:0,50,346	0/0:15,0:15:33.88:0,34,366	0/0:34,0:34:74.80:0,75,783	0/0:11,0:11:26.97:0,27,267	0/0:18,0:18:40.28:0,40,249	0/0:19,0:19:41.25:0,41,301	0/0:13,0:13:35.59:0,36,285	1/1:23,1:24:67.16:471,67,0	0/0:22,0:22:51.28:0,51,390	0/0:24,0:23:65.45:0,65,418	0/0:6,0:8:20.69:0,21,147
chr10	10368379	.	A	AG	2385.64	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-8.541;DP=638;FS=4.092;HRun=0;HaplotypeScore=61.1287;InbreedingCoeff=0.9999;MQ=87.85;MQ0=0;MQRankSum=-1.722;QD=45.01;ReadPosRankSum=1.334;VQSLOD=4.0105;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:57:99:0,171,2274	0/0:13,0:13:39.13:0,39,545	0/0:24,0:24:71.70:0,72,940	0/0:22,0:22:63.18:0,63,814	1/1:0,28:28:84.22:1312,84,0	0/0:26,0:26:78.25:0,78,1070	0/0:27,0:27:81.22:0,81,1081	0/0:22,0:22:63.20:0,63,867	0/0:18,0:18:54.18:0,54,755	0/0:27,0:27:81.26:0,81,1104	0/0:20,0:20:60.19:0,60,823	0/0:20,0:20:60.20:0,60,837	0/0:16,0:16:48.15:0,48,656	0/0:17,0:17:48.16:0,48,671	0/0:22,0:22:60.19:0,60,824	0/0:26,0:26:75.24:0,75,1034	0/0:22,0:22:66.21:0,66,903	0/0:29,0:29:87.25:0,87,1193	0/0:19,0:19:57.19:0,57,797	0/0:23,0:23:69.22:0,69,948	0/0:15,0:15:42.13:0,42,572	0/0:15,0:15:45.15:0,45,629	0/0:15,0:15:42.14:0,42,587	0/0:27,0:26:81.25:0,81,1106	1/1:0,25:25:75.26:1195,75,0	0/0:17,0:17:51.17:0,51,713	0/0:22,0:22:63.20:0,63,866	0/0:24,0:24:72.24:0,72,1007
chr10	10368758	.	CGTGT	C	990.25	PASS	AB=0.878;AC=32;AF=0.727;AN=44;BaseQRankSum=1.003;DP=484;FS=2.877;HRun=0;HaplotypeScore=89.8613;InbreedingCoeff=0.1431;MQ=59.69;MQ0=10;MQRankSum=-0.380;QD=3.26;ReadPosRankSum=1.705;VQSLOD=1.8420;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:28,1:29:6:71,6,0	./.	./.	./.	1/1:13,0:16:9.01:82,9,0	0/0:15,0:17:13.29:0,13,92	0/0:20,0:25:0.47:0,0,1	0/0:19,0:18:0.94:0,1,2	0/1:11,0:15:19.06:19,0,22	1/1:17,2:17:4.48:69,4,0	1/1:11,2:13:3.01:46,3,0	1/1:7,6:13:6.02:91,6,0	1/1:10,2:12:3.01:46,3,0	./.	1/1:9,1:10:3.01:46,3,0	1/1:4,0:5:3:28,3,0	1/1:27,2:29:7.83:96,8,0	0/1:24,6:30:7.18:125,0,7	1/1:15,4:19:6:70,6,0	0/1:11,0:12:15.72:22,0,16	0/0:26,0:24:15.02:0,15,228	1/1:9,3:11:3.01:46,3,0	./.	0/1:29,1:30:4.23:150,0,4	./.	1/1:18,0:18:3.61:16,4,0	1/1:12,1:13:2.65:45,3,0	1/1:6,3:8:3.01:46,3,0
chr10	10369252	.	C	CT	562.80	PASS	AB=0.742;AC=16;AF=0.286;AN=56;BaseQRankSum=3.430;DP=216;FS=64.314;HRun=0;HaplotypeScore=35.8960;InbreedingCoeff=-0.3294;MQ=61.18;MQ0=0;MQRankSum=-4.301;QD=4.61;ReadPosRankSum=4.226;VQSLOD=0.9940;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:8,1:9:10.53:0,11,241	0/1:3,1:4:20.49:20,0,112	0/0:9,0:6:1.26:0,1,143	0/0:8,0:7:7.13:0,7,89	0/0:9,4:13:2.99:0,3,42	0/1:3,3:6:49.25:49,0,73	0/1:9,2:11:17.63:18,0,244	0/0:11,0:11:18.05:0,18,230	0/1:6,3:9:56.11:56,0,213	0/1:6,4:10:83.53:84,0,224	0/0:4,0:4:12.03:0,12,151	0/1:2,1:3:26.51:27,0,36	0/1:4,4:8:27.37:79,0,27	0/1:7,4:11:9.12:9,0,188	0/0:7,3:10:6.67:0,7,118	0/1:5,4:9:80.44:80,0,140	0/0:4,0:4:9.03:0,9,126	0/0:1,0:1:3.01:0,3,42	0/0:4,0:4:8.90:0,9,99	0/1:6,3:9:27.01:27,0,74	0/0:5,0:5:3.48:0,3,39	0/1:9,5:14:40.86:41,0,178	0/0:5,3:8:6.15:0,6,84	0/0:8,0:8:18.06:0,18,251	0/1:8,2:10:12.95:13,0,307	0/1:4,2:6:61.74:62,0,110	0/1:5,4:9:28.64:29,0,98	1/1:0,3:3:9.03:122,9,0
chr10	10371847	.	AT	A	1680.66	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=11.681;DP=769;FS=0.000;HRun=7;HaplotypeScore=80.2170;InbreedingCoeff=0.9993;MQ=77.50;MQ0=1;MQRankSum=-3.609;QD=24.72;ReadPosRankSum=0.975;VQSLOD=3.9890;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,141,1766	0/0:10,0:10:27.09:0,27,340	0/0:28,0:27:41.35:0,41,603	0/0:23,0:22:56.65:0,57,649	1/1:1,38:39:99:1129,111,0	0/0:20,0:20:57.18:0,57,717	0/0:27,0:28:65.27:0,65,862	0/0:34,0:34:81.25:0,81,1008	0/0:29,0:29:84.26:0,84,1043	0/0:27,0:27:75.23:0,75,933	0/0:25,0:25:63.20:0,63,788	0/0:35,0:35:99:0,102,1268	0/0:25,0:25:69.21:0,69,855	0/0:31,0:31:84.25:0,84,1034	0/0:27,0:27:78.25:0,78,981	0/0:22,0:22:66.21:0,66,830	0/0:34,0:34:96.10:0,96,1207	0/0:26,0:26:72.19:0,72,888	0/0:28,0:28:72.21:0,72,888	0/0:27,0:27:75.22:0,75,928	0/0:31,0:31:90.28:0,90,1120	0/0:30,0:30:84.27:0,84,1056	0/0:20,0:20:51.15:0,51,618	0/0:21,0:21:57.18:0,57,717	1/1:3,26:29:66.15:673,66,0	0/0:32,0:32:90.29:0,90,1128	0/0:27,0:27:81.24:0,81,1003	0/0:11,0:11:33.11:0,33,415
chr10	10372164	.	A	AC	2563.96	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.702;DP=849;FS=3.070;HRun=1;HaplotypeScore=97.9960;InbreedingCoeff=0.9999;MQ=87.40;MQ0=0;MQRankSum=-4.021;QD=42.03;ReadPosRankSum=1.927;VQSLOD=3.7601;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:60,0:60:99:0,181,2498	0/0:14,0:14:42.14:0,42,586	0/0:31,0:31:79.45:0,79,1036	0/0:28,0:28:75.18:0,75,993	1/1:1,31:32:90.31:1439,90,0	0/0:26,0:26:72.24:0,72,1007	0/0:37,0:37:99:0,111,1551	0/0:31,0:31:90.30:0,90,1258	0/0:36,0:36:99:0,108,1470	0/0:30,0:30:87.29:0,87,1216	0/0:20,0:20:60.20:0,60,837	0/0:36,0:36:99:0,108,1511	0/0:34,0:34:99:0,99,1384	0/0:24,0:24:72.24:0,72,1004	0/0:46,0:46:99:0,138,1911	0/0:41,0:41:99:0,123,1719	0/0:26,0:26:78.24:0,78,1072	0/0:19,0:19:57.19:0,57,797	0/0:26,0:26:78.23:0,78,1057	0/0:23,0:23:69.18:0,69,912	0/0:63,0:63:99:0,187,2580	0/0:27,0:27:81.27:0,81,1133	0/0:19,0:19:57.17:0,57,779	0/0:38,0:38:99:0,114,1591	1/1:1,28:29:78.27:1247,78,0	0/0:23,0:23:69.22:0,69,949	0/0:18,0:18:54.16:0,54,737	0/0:12,0:12:36.12:0,36,503
chr10	10374645	.	G	GACC	1544.38	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-5.046;DP=663;FS=0.000;HRun=0;HaplotypeScore=96.2376;InbreedingCoeff=0.9972;MQ=80.57;MQ0=0;MQRankSum=-2.074;QD=41.74;ReadPosRankSum=0.666;VQSLOD=4.8561;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,129,2113	0/0:13,0:13:36.12:0,36,595	0/0:22,0:22:54.17:0,54,872	0/0:22,0:23:59.45:0,59,980	1/1:1,18:19:30.10:647,30,0	0/0:13,0:13:39.13:0,39,643	0/0:29,0:29:81.20:0,81,1257	0/0:28,0:28:66.21:0,66,1073	0/0:28,0:28:75.18:0,75,1167	0/0:36,0:36:96.27:0,96,1516	0/0:9,0:9:24.08:0,24,380	0/0:34,0:34:99:0,99,1649	0/0:24,0:24:57.16:0,57,895	0/0:29,0:29:84.27:0,84,1371	0/0:18,0:18:48.12:0,48,765	0/0:18,0:18:54.18:0,54,900	0/0:32,0:32:93.27:0,93,1519	0/0:23,0:23:66.23:0,66,1085	0/0:20,0:20:60.20:0,60,956	0/0:12,0:12:36.12:0,36,600	0/0:56,0:56:99:0,156,2514	0/0:20,0:20:57.15:0,57,914	0/0:11,0:11:30.10:0,30,500	0/0:34,0:34:96.28:0,96,1567	1/1:3,15:18:45.15:1019,45,0	0/0:22,0:22:63.22:0,63,1039	0/0:18,0:18:54.17:0,54,862	0/0:8,0:8:24.08:0,24,400
chr10	10375361	.	G	GT	222.95	PASS	AB=0.948;AC=15;AF=0.278;AN=54;BaseQRankSum=3.803;DP=150;FS=2.873;HRun=1;HaplotypeScore=134.4494;InbreedingCoeff=0.0072;MQ=69.24;MQ0=0;MQRankSum=-1.180;QD=3.14;ReadPosRankSum=0.917;VQSLOD=0.1598;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:15.74:0,16,125	0/0:0,0:1:1.82:0,2,5	0/0:6,0:5:10.13:0,10,133	0/1:4,0:4:0.78:1,0,24	./.	0/0:1,0:1:3:0,3,25	0/0:7,0:7:6.91:0,7,179	0/0:11,0:11:23.72:0,24,233	0/0:2,0:2:5.05:0,5,43	1/1:4,1:5:3.09:58,3,0	0/1:4,0:4:1.51:2,0,11	0/0:7,1:8:1.57:0,2,113	0/1:5,2:7:29.03:74,0,29	0/1:11,1:12:66.17:66,0,68	0/1:11,0:11:58.15:58,0,93	0/1:5,0:5:0.13:0,0,62	0/0:1,0:1:3.01:0,3,30	0/1:6,0:6:8.18:8,0,62	0/0:2,0:2:5.98:0,6,59	0/0:3,0:3:6.02:0,6,75	0/0:7,0:7:13.48:0,13,119	0/1:7,0:7:4.08:4,0,45	0/0:4,0:4:2.03:0,2,6	0/0:7,0:7:8.58:0,9,52	1/1:4,0:4:2.97:20,3,0	0/1:4,1:5:34.42:45,0,34	0/0:9,0:9:12.13:0,12,184	1/1:1,0:1:2.90:16,3,0
chr10	10375371	.	G	GAGA	1668.06	PASS	AB=0.811;AC=16;AF=0.296;AN=54;BaseQRankSum=-1.752;DP=211;FS=25.915;HRun=0;HaplotypeScore=147.9269;InbreedingCoeff=-0.3204;MQ=70.51;MQ0=0;MQRankSum=-0.904;QD=12.27;ReadPosRankSum=-0.190;VQSLOD=1.6242;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:12,2:14:65.29:65,0,195	0/0:2,0:2:1.25:0,1,3	0/1:7,0:6:6.25:6,0,211	0/0:7,0:7:6.29:0,6,145	./.	0/0:3,0:3:9.01:0,9,110	0/0:8,0:8:17.29:0,17,280	0/0:15,0:15:39.67:0,40,479	0/0:2,0:2:2.01:0,2,54	0/1:5,2:7:23.15:201,0,23	1/1:7,0:7:8.28:36,8,0	0/1:11,1:12:99:153,0,171	0/1:8,3:11:99:169,0,149	0/1:8,6:15:99:119,0,191	0/1:9,2:11:99:140,0,250	0/1:5,1:6:99:114,0,138	0/1:1,1:2:13.42:51,0,13	0/1:4,3:7:96.08:190,0,96	0/0:4,0:4:0.10:0,0,68	0/0:4,0:4:12.04:0,12,209	0/0:14,0:14:29.83:0,30,340	0/1:6,3:9:54.68:188,0,55	0/0:5,1:6:11.47:0,11,130	0/0:6,1:7:10.83:0,11,132	0/1:7,1:8:37.58:64,0,38	0/1:6,2:8:99:251,0,122	0/1:9,3:12:70.50:70,0,200	0/0:1,0:1:3.01:0,3,34
chr10	10375378	.	G	GT	973.69	PASS	AB=0.859;AC=14;AF=0.250;AN=56;BaseQRankSum=7.273;DP=244;FS=28.973;HRun=0;HaplotypeScore=147.3107;InbreedingCoeff=-0.3864;MQ=72.16;MQ0=0;MQRankSum=-6.124;QD=6.36;ReadPosRankSum=1.357;VQSLOD=1.8318;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:12,5:17:99:148,0,106	0/0:2,1:3:5.05:0,5,45	0/0:9,0:8:17.27:0,17,174	0/0:8,0:8:9.74:0,10,140	0/0:1,1:2:3.01:0,3,36	0/0:4,0:4:2.77:0,3,88	0/1:10,0:10:10.56:11,0,200	0/0:16,0:16:29.11:0,29,441	0/0:3,0:3:2.14:0,2,40	0/1:6,1:7:36.51:37,0,138	0/1:5,2:7:29.58:34,0,30	0/1:10,5:15:99:136,0,113	0/1:11,1:12:57.81:58,0,126	0/1:13,3:16:99:173,0,173	0/1:6,5:11:99:178,0,101	0/1:5,2:7:78.19:98,0,78	0/1:4,0:4:0.57:1,0,51	0/0:6,0:6:14.99:0,15,175	0/0:5,0:5:8.16:0,8,127	0/0:5,0:5:15.05:0,15,209	0/1:16,0:16:24.19:24,0,303	0/0:10,1:11:4.01:0,4,190	0/0:7,0:7:14.48:0,14,145	0/1:9,0:9:17.03:17,0,26	0/0:9,1:10:9.39:0,9,144	0/1:8,1:9:28.41:28,0,210	0/1:8,5:13:99:175,0,162	0/0:1,1:2:4.41:0,4,14
chr10	10375383	.	G	GA	1257.39	PASS	AB=0.890;AC=18;AF=0.321;AN=56;BaseQRankSum=7.404;DP=258;FS=54.196;HRun=0;HaplotypeScore=151.3352;InbreedingCoeff=-0.4845;MQ=69.52;MQ0=0;MQRankSum=-4.439;QD=6.29;ReadPosRankSum=2.401;VQSLOD=1.3446;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:12,4:17:99:247,0,125	0/0:3,1:4:8.03:0,8,71	0/0:8,0:8:15.31:0,15,180	0/0:10,0:10:9.60:0,10,160	0/0:1,1:2:3.01:0,3,42	0/1:4,0:4:7.25:7,0,73	0/1:11,0:11:75.91:76,0,158	0/1:16,0:16:7.88:8,0,395	0/0:3,0:3:3.90:0,4,44	0/1:6,1:7:68.14:68,0,128	0/1:7,2:9:33.46:68,0,33	0/1:9,6:15:99:142,0,165	0/1:12,1:13:99:112,0,180	0/1:12,3:16:99:162,0,204	0/1:7,5:12:99:169,0,144	0/1:5,2:7:96.15:96,0,108	0/1:6,0:6:1.34:1,0,130	0/0:7,0:7:16.55:0,17,228	0/0:5,0:5:8.11:0,8,125	0/0:5,0:5:15.05:0,15,209	0/1:17,0:17:31.72:32,0,360	0/0:10,2:12:20.50:0,21,215	0/1:7,0:7:11.51:12,0,118	0/1:10,0:10:19.67:20,0,106	0/1:9,1:10:6.85:7,0,156	0/1:10,0:10:12.01:12,0,284	0/1:8,5:13:99:169,0,219	0/0:1,1:2:4.56:0,5,17
chr10	10375384	.	G	GA	2085.16	PASS	AB=0.811;AC=19;AF=0.339;AN=56;BaseQRankSum=9.169;DP=271;FS=75.493;HRun=0;HaplotypeScore=159.9291;InbreedingCoeff=-0.5549;MQ=71.70;MQ0=0;MQRankSum=-3.814;QD=10.27;ReadPosRankSum=1.664;VQSLOD=0.6805;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:11,6:17:99:354,0,122	0/0:3,0:4:8.05:0,8,75	0/0:9,0:9:17.74:0,18,193	0/0:11,0:11:4.12:0,4,153	0/0:4,0:4:4.56:0,5,46	0/1:2,2:4:39.08:39,0,75	0/1:9,5:14:99:111,0,153	0/0:14,1:15:13.05:0,13,393	0/1:2,1:3:24.34:24,0,36	0/1:7,1:8:88.49:88,0,102	0/1:6,3:10:20.83:111,0,21	0/1:12,2:15:99:181,0,156	0/1:10,3:13:99:100,0,163	0/1:15,0:16:99:191,0,172	0/1:11,3:14:99:257,0,137	0/1:6,0:7:87.78:88,0,121	0/1:5,1:6:27.79:28,0,149	0/1:6,1:7:23.73:24,0,203	0/1:4,1:5:32.78:33,0,112	0/0:5,0:5:15.05:0,15,209	0/1:14,4:18:99:211,0,358	0/0:11,1:12:21.09:0,21,232	0/0:5,1:6:3.50:0,3,118	0/1:5,5:10:99:124,0,105	0/1:9,2:11:49.90:50,0,146	0/1:10,1:12:4.63:5,0,271	0/1:11,2:13:99:219,0,208	0/0:2,0:2:3.85:0,4,11
chr10	10375393	.	GGTAGA	G	789.73	PASS	AB=0.929;AC=22;AF=0.393;AN=56;BaseQRankSum=9.837;DP=301;FS=65.539;HRun=0;HaplotypeScore=177.5714;InbreedingCoeff=-0.5441;MQ=73.25;MQ0=0;MQRankSum=-6.486;QD=3.26;ReadPosRankSum=4.555;VQSLOD=0.4417;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:18,0:18:99:130,0,458	0/1:6,0:6:0.82:1,0,360	0/0:10,0:10:22.06:0,22,585	0/1:14,0:14:32.54:33,0,453	0/0:4,1:5:8.62:0,9,198	0/1:3,2:5:38.86:39,0,268	0/1:12,6:18:18.12:18,0,807	0/0:13,0:13:11.01:0,11,812	0/1:3,1:4:39.31:39,0,177	0/1:8,0:8:0.12:0,0,357	0/1:9,0:9:46.98:47,0,151	0/1:16,0:17:50.87:51,0,517	0/1:13,0:15:65.90:66,0,530	0/1:14,0:16:58.32:58,0,535	0/1:16,0:16:94.75:95,0,535	0/1:8,0:8:34.38:34,0,428	0/1:9,0:9:2.38:2,0,692	0/1:7,0:7:43.30:43,0,305	0/1:4,1:5:41.12:41,0,198	0/0:6,0:6:18.06:0,18,503	0/1:17,2:19:54.44:54,0,1160	0/0:10,0:10:14.43:0,14,459	0/1:8,0:8:0.82:1,0,285	0/1:13,0:13:58.89:59,0,561	0/1:11,0:11:59.65:60,0,373	0/0:14,0:15:2.96:0,3,958	0/1:14,0:13:58.70:59,0,597	0/1:1,0:2:0.99:5,0,1
chr10	10375396	.	AGAGGGT	A	588.23	PASS	AB=0.912;AC=17;AF=0.304;AN=56;BaseQRankSum=9.249;DP=300;FS=57.441;HRun=0;HaplotypeScore=180.1638;InbreedingCoeff=-0.4717;MQ=78.01;MQ0=0;MQRankSum=-7.811;QD=2.96;ReadPosRankSum=5.323;VQSLOD=0.9277;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:11,5:16:99:107,0,698	0/0:6,0:6:13.29:0,13,455	0/0:13,0:13:14.73:0,15,869	0/0:13,0:15:25.56:0,26,712	0/0:5,0:5:9.50:0,10,293	0/1:5,0:5:34.32:34,0,326	0/1:18,0:18:14.87:15,0,1073	0/0:11,0:11:2.94:0,3,937	0/1:5,0:5:30.71:31,0,303	0/1:8,0:8:14.55:15,0,379	0/1:7,3:10:25.64:26,0,177	0/1:16,1:17:44.76:45,0,742	0/1:13,2:15:21.89:22,0,738	0/1:14,1:15:51.75:52,0,671	0/1:14,3:17:99:110,0,839	0/1:7,0:7:5.16:5,0,485	0/0:9,1:10:3.05:0,3,905	0/1:7,1:8:44.73:45,0,465	0/1:5,0:5:39:39,0,202	0/0:6,0:6:18.05:0,18,580	0/1:16,0:16:38.51:39,0,1449	0/0:9,1:10:15.47:0,15,504	0/0:7,1:8:9.17:0,9,409	0/1:9,4:13:44.36:44,0,747	0/1:9,1:11:46.79:47,0,480	0/0:15,0:15:43.93:0,44,1273	0/1:11,2:12:67.71:68,0,698	0/0:2,0:2:4.56:0,5,38
chr10	10375914	.	G	GA	10485.05	PASS	AB=0.581;AC=37;AF=0.661;AN=56;BaseQRankSum=-14.645;DP=554;FS=9.260;HRun=8;HaplotypeScore=47.0831;InbreedingCoeff=0.9014;MQ=70.33;MQ0=1;MQRankSum=-3.532;QD=27.30;ReadPosRankSum=6.271;VQSLOD=4.3770;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,20:22:54.16:623,54,0	1/1:2,9:11:27.08:312,27,0	0/0:16,0:16:30.86:0,31,270	0/0:12,0:12:33.02:0,33,301	1/1:6,19:25:32.71:630,33,0	0/0:22,0:22:60.03:0,60,549	0/0:18,0:18:45.01:0,45,412	0/0:29,0:29:87.02:0,87,787	0/0:11,0:11:30.02:0,30,275	1/1:2,20:22:60.18:693,60,0	1/1:7,32:39:93.19:1044,93,0	1/1:0,13:13:39.12:450,39,0	1/1:1,11:12:33.10:381,33,0	1/1:2,6:8:15.04:172,15,0	1/1:4,18:22:29.70:596,30,0	1/1:2,10:12:27.08:312,27,0	0/1:10,26:36:25.47:747,0,25	1/1:2,19:21:51.15:589,51,0	0/0:24,0:24:66.02:0,66,601	0/0:30,0:30:84.04:0,84,769	0/0:7,0:7:21.01:0,21,192	1/1:4,17:21:51.15:584,51,0	1/1:4,18:22:48.13:552,48,0	1/1:1,2:3:6.02:69,6,0	1/1:3,22:25:38.73:700,39,0	1/1:3,22:25:66.18:752,66,0	1/1:2,14:16:36.11:416,36,0	1/1:0,29:29:75.22:866,75,0
chr10	10376744	.	C	CA	2792.21	PASS	AB=0.708;AC=37;AF=0.661;AN=56;BaseQRankSum=10.771;DP=512;FS=0.000;HRun=1;HaplotypeScore=85.4671;InbreedingCoeff=0.7567;MQ=74.40;MQ0=0;MQRankSum=-0.483;QD=8.07;ReadPosRankSum=0.197;VQSLOD=0.5832;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,13:21:8.54:161,9,0	1/1:1,9:12:20.54:171,21,0	0/0:16,0:15:38.90:0,39,447	0/0:5,0:4:9.02:0,9,97	1/1:22,0:25:27.57:150,28,0	0/0:23,0:23:69.14:0,69,852	0/0:27,0:27:69.17:0,69,892	0/0:28,1:29:72.21:0,72,919	0/0:10,0:10:27.07:0,27,346	1/1:12,5:18:23.76:186,24,0	1/1:17,7:24:11.87:256,12,0	1/1:5,14:20:8.11:64,8,0	1/1:12,3:16:28.94:221,29,0	1/1:1,7:8:2.94:29,3,0	1/1:15,3:18:20.79:261,21,0	1/1:5,11:16:1.01:85,1,0	1/1:17,3:20:3.53:279,4,0	1/1:2,7:9:3.46:30,3,0	0/0:13,0:13:33.08:0,33,400	0/0:31,0:31:93.23:0,93,1163	0/0:12,0:12:33.11:0,33,420	0/1:10,7:17:3.65:74,0,4	1/1:5,18:23:11.74:161,12,0	1/1:3,14:18:20.77:188,21,0	1/1:3,0:13:3.59:30,4,0	1/1:12,6:19:22.75:181,23,0	1/1:10,18:29:4.56:153,5,0	1/1:9,9:19:32.73:313,33,0
chr10	10376746	.	C	CA	3538.95	PASS	AB=0.900;AC=41;AF=0.732;AN=56;BaseQRankSum=9.544;DP=536;FS=0.950;HRun=12;HaplotypeScore=93.8213;InbreedingCoeff=0.6320;MQ=72.82;MQ0=0;MQRankSum=-1.120;QD=8.72;ReadPosRankSum=-3.927;VQSLOD=2.0852;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:22:26.84:234,27,0	1/1:12,0:12:20.71:174,21,0	0/0:15,0:13:10.46:0,10,69	0/1:5,1:5:20.13:20,0,33	1/1:28,0:28:34.69:198,35,0	0/1:20,2:23:5.64:6,0,281	0/0:25,0:27:25.50:0,25,304	0/0:27,0:29:30.16:0,30,221	0/0:11,0:12:3.42:0,3,118	1/1:21,0:21:30.27:252,30,0	1/1:25,0:25:24.63:294,25,0	1/1:19,1:20:13.08:99,13,0	1/1:20,0:19:34.27:238,34,0	1/1:13,0:13:8.92:68,9,0	1/1:17,0:17:18.72:231,19,0	1/1:16,0:16:4.30:112,4,0	1/1:20,0:20:4.45:263,4,0	1/1:9,0:9:3:29,3,0	0/1:10,1:12:3.32:3,0,133	0/0:32,2:35:15.18:0,15,429	0/0:12,0:12:23.79:0,24,175	1/1:16,0:16:5.73:126,6,0	1/1:23,0:23:14.95:167,15,0	1/1:18,0:18:21.76:191,22,0	1/1:12,0:12:10.59:50,11,0	1/1:22,0:21:32.29:233,32,0	1/1:32,0:32:22.68:233,23,0	1/1:19,0:19:35.62:319,36,0
chr10	10378851	.	G	GGAGAGA	3836.92	PASS	AB=0.955;AC=14;AF=0.250;AN=56;BaseQRankSum=8.061;DP=974;FS=10.060;HRun=0;HaplotypeScore=258.1100;InbreedingCoeff=-0.3363;MQ=81.28;MQ0=0;MQRankSum=-11.319;QD=7.70;ReadPosRankSum=-6.466;VQSLOD=-0.0024;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:58:65:0,65,2780	0/0:12,0:12:36.12:0,36,852	0/1:37,1:37:99:152,0,1707	0/1:47,1:48:99:108,0,1876	0/1:26,10:37:99:212,0,875	0/1:29,0:29:99:607,0,651	0/1:29,0:29:99:298,0,1112	0/1:43,0:43:99:199,0,1840	0/1:42,0:42:99:1103,0,688	0/1:29,0:29:99:126,0,1435	0/1:27,0:27:31.51:32,0,1407	0/0:38,0:38:49.73:0,50,2238	0/0:27,0:27:58.24:0,58,1610	0/0:41,0:41:52.48:0,52,2274	0/1:36,0:36:20.13:20,0,2187	0/0:35,0:35:90.31:0,90,2101	0/0:41,0:41:99:0,107,2343	0/0:41,0:41:38.54:0,39,2460	0/1:36,0:36:99:105,0,2011	0/1:37,0:37:52.15:52,0,2056	0/0:35,0:35:74.26:0,74,1730	0/0:19,0:19:45.15:0,45,1026	0/0:30,0:30:18.09:0,18,1612	0/0:50,0:50:99:0,128,2927	0/1:11,14:25:99:560,0,596	0/1:42,0:42:99:263,0,2372	0/0:37,0:37:44.45:0,44,2325	0/0:12,0:12:10.10:0,10,650
chr10	10379036	.	GAGA	G	1345.81	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.784;DP=779;FS=7.936;HRun=0;HaplotypeScore=112.6066;InbreedingCoeff=0.9972;MQ=63.33;MQ0=2;MQRankSum=-2.082;QD=31.30;ReadPosRankSum=1.353;VQSLOD=3.7351;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:81.19:0,81,1619	0/0:7,0:7:21.07:0,21,430	0/0:35,0:32:87.17:0,87,1651	0/0:30,0:27:58.01:0,58,1166	1/1:2,21:23:26.26:810,26,0	0/0:19,0:19:45.15:0,45,831	0/0:16,0:16:48.16:0,48,984	0/0:35,0:35:87.30:0,87,1715	0/0:26,0:26:72.24:0,72,1427	0/0:43,0:43:99:0,117,2492	0/0:25,0:24:63.21:0,63,1186	0/0:21,0:21:57.20:0,57,1221	0/0:33,0:33:84.29:0,84,1755	0/0:19,0:19:48.16:0,48,1011	0/0:35,0:35:90.31:0,90,1926	0/0:30,0:30:84.29:0,84,1756	0/0:35,0:35:99:0,99,2123	0/0:33,0:34:93.78:0,94,1876	0/0:30,0:30:65.55:0,66,1322	0/0:27,0:27:75.23:0,75,1413	0/0:24,0:24:57.18:0,57,1154	0/0:28,0:28:69.22:0,69,1396	0/0:29,0:29:78.27:0,78,1602	0/0:32,0:32:96.33:0,96,2033	1/1:2,18:20:42.14:657,42,0	0/0:38,0:38:99:0,102,2116	0/0:32,0:32:84.27:0,84,1775	0/0:21,0:21:63.22:0,63,1304
chr10	10379459	.	CCG	C	2391.95	PASS	AC=36;AF=0.720;AN=50;BaseQRankSum=6.209;DP=315;FS=12.041;HRun=0;HaplotypeScore=28.2776;InbreedingCoeff=0.6483;MQ=29.96;MQ0=82;MQRankSum=2.321;QD=20.10;ReadPosRankSum=4.056;VQSLOD=1.9912;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,11:11:24.08:367,24,0	1/1:0,3:3:5.97:65,6,0	./.	0/0:33,1:1:3.01:0,3,43	0/0:5,0:4:9.03:0,9,169	1/1:1,10:8:12.04:183,12,0	1/1:0,4:2:3.01:46,3,0	0/0:32,0:20:60.18:0,60,1121	1/1:0,5:4:8.98:111,9,0	1/1:1,3:3:3.01:46,3,0	1/1:1,8:7:15.05:229,15,0	1/1:0,6:4:12.04:183,12,0	1/1:0,4:2:3.01:46,3,0	1/1:1,8:7:21.07:321,21,0	1/1:1,8:5:15.05:229,15,0	1/1:1,7:4:12.04:183,12,0	./.	1/1:1,4:1:3.01:46,3,0	0/0:21,0:15:45.15:0,45,855	0/0:17,0:16:21.07:0,21,387	0/0:53,0:44:3.01:0,3,57	./.	1/1:0,3:2:3.01:46,3,0	1/1:1,3:2:3.01:46,3,0	0/0:8,0:5:15.05:0,15,259	1/1:1,3:3:9.03:137,9,0	1/1:2,11:10:15.05:229,15,0	1/1:1,5:4:3.01:46,3,0
chr10	10381915	.	TA	T	5811.33	PASS	AB=0.900;AC=41;AF=0.732;AN=56;BaseQRankSum=6.989;DP=495;FS=2.446;HRun=12;HaplotypeScore=72.2276;InbreedingCoeff=0.8955;MQ=57.53;MQ0=1;MQRankSum=0.182;QD=16.60;ReadPosRankSum=5.529;VQSLOD=5.7422;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,17:19:44.80:348,45,0	1/1:1,5:6:8.95:70,9,0	0/0:11,0:9:16.98:0,17,150	0/1:8,1:7:18.04:18,0,24	0/0:1,0:25:51.76:0,52,260	1/1:6,18:24:38.78:302,39,0	1/1:2,11:13:26.85:209,27,0	0/0:30,0:30:69.14:0,69,699	1/1:4,11:15:26.85:209,27,0	1/1:5,17:23:55.64:403,56,0	1/1:3,18:22:52.33:385,52,0	1/1:1,10:12:28.91:215,29,0	1/1:2,16:18:37.68:284,38,0	1/1:1,11:12:31.92:238,32,0	1/1:2,11:13:26.89:209,27,0	1/1:3,6:10:19.95:145,20,0	1/1:7,17:24:49.58:377,50,0	1/1:2,11:12:23.90:186,24,0	0/0:20,0:22:61.49:0,61,589	0/0:36,0:36:83.87:0,84,803	0/0:9,0:9:24.05:0,24,244	1/1:3,12:15:26.85:209,27,0	1/1:4,21:25:55.61:424,56,0	1/1:2,16:18:47.81:371,48,0	0/0:2,0:11:19.85:0,20,103	1/1:2,22:25:61.76:468,62,0	1/1:1,22:23:65.75:511,66,0	1/1:2,9:11:29.88:232,30,0
chr10	10382178	.	GTC	G	1530.73	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.096;DP=565;FS=2.115;HRun=0;HaplotypeScore=65.1096;InbreedingCoeff=0.9047;MQ=68.20;MQ0=3;MQRankSum=0.436;QD=36.45;ReadPosRankSum=2.314;VQSLOD=5.5426;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:87.30:0,87,1646	0/0:12,0:12:36.12:0,36,663	0/0:18,0:16:26.55:0,27,648	0/0:12,0:11:2.18:0,2,352	1/1:0,21:21:63.21:963,63,0	0/0:27,0:27:78.25:0,78,1440	0/0:15,0:15:42.14:0,42,804	0/0:27,0:27:75.24:0,75,1354	0/0:19,0:19:57.18:0,57,1032	0/0:28,0:28:84.28:0,84,1566	0/0:23,0:23:66.23:0,66,1252	0/0:13,0:13:36.11:0,36,656	0/0:15,0:15:42.13:0,42,770	0/0:9,0:9:24.08:0,24,459	0/0:17,0:17:51.14:0,51,898	0/0:19,0:19:57.20:0,57,1091	0/0:18,0:18:51.17:0,51,929	0/0:29,0:28:81.12:0,81,1378	0/0:21,0:21:63.20:0,63,1132	0/0:20,0:20:60.17:0,60,1061	0/0:14,0:14:42.14:0,42,804	0/0:26,0:26:75.18:0,75,1344	0/0:19,0:19:57.14:0,57,1051	0/0:22,0:22:66.21:0,66,1205	1/1:2,19:20:45.15:689,45,0	0/0:24,0:24:72.25:0,72,1373	0/0:36,0:36:99:0,108,1986	0/0:10,0:10:30.10:0,30,523
chr10	10382671	.	G	GGTGT	2896.31	PASS	AB=0.876;AC=38;AF=0.826;AN=46;BaseQRankSum=0.918;DP=442;FS=0.000;HRun=0;HaplotypeScore=99.6074;InbreedingCoeff=0.1723;MQ=54.55;MQ0=8;MQRankSum=-1.080;QD=8.23;ReadPosRankSum=-0.733;VQSLOD=2.4740;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:31,0:31:7.47:229,0,7	1/1:3,2:6:6.02:106,6,0	./.	./.	1/1:16,0:15:3.01:43,3,0	./.	1/1:17,0:15:5.69:99,6,0	1/1:16,0:15:3.01:32,3,0	1/1:10,0:14:6:76,6,0	1/1:15,0:15:10.85:138,11,0	./.	1/1:14,0:16:5.75:49,6,0	1/1:4,5:9:3.44:71,3,0	1/1:19,0:19:5.92:46,6,0	1/1:8,3:13:6.02:140,6,0	1/1:11,0:11:12.51:203,13,0	1/1:12,6:23:20.27:294,20,0	0/1:19,2:21:64.71:307,0,65	./.	0/0:10,0:10:12.02:0,12,142	0/0:29,0:27:9.03:0,9,127	1/1:9,3:13:2.74:12,3,0	1/1:11,0:11:5.73:107,6,0	1/1:25,5:29:24.08:498,24,0	1/1:12,0:13:6.02:103,6,0	0/1:16,0:19:0.54:49,0,1	1/1:13,6:19:17.73:310,18,0	0/1:11,0:16:41.81:114,0,42
chr10	10382811	.	C	CG	4416.08	PASS	AB=0.687;AC=37;AF=0.661;AN=56;BaseQRankSum=-7.245;DP=424;FS=3.352;HRun=9;HaplotypeScore=55.7916;InbreedingCoeff=0.5411;MQ=88.82;MQ0=0;MQRankSum=-5.111;QD=13.71;ReadPosRankSum=2.234;VQSLOD=4.7087;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,21:27:19.80:401,20,0	1/1:0,3:3:9.02:100,9,0	0/1:21,0:22:8.68:9,0,138	0/0:24,0:25:33.11:0,33,241	0/0:3,0:11:15.14:0,15,44	1/1:5,9:14:9.02:100,9,0	1/1:6,12:18:21.06:232,21,0	0/0:10,0:10:8.31:0,8,60	0/1:7,11:18:4.53:178,0,5	1/1:3,6:9:15.04:166,15,0	1/1:1,2:3:3.01:33,3,0	1/1:4,17:21:4.06:273,4,0	0/1:7,10:17:4.97:178,0,5	0/1:4,11:15:25:197,0,25	1/1:1,10:11:24.06:265,24,0	1/1:2,9:11:18.05:199,18,0	1/1:4,28:32:31.10:569,31,0	1/1:5,18:22:19.54:440,20,0	0/0:9,0:9:11.98:0,12,102	0/0:9,0:9:11.98:0,12,102	0/0:30,1:31:23.77:0,24,435	1/1:2,12:14:18.41:199,18,0	0/1:5,9:14:7.68:140,0,8	1/1:3,11:15:26.90:280,27,0	0/0:2,0:7:6.11:0,6,18	1/1:6,8:14:20.75:208,21,0	1/1:5,7:12:10.27:103,10,0	1/1:5,3:8:15.01:148,15,0
chr10	10383405	.	TG	T	812.48	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.190;DP=656;FS=0.745;HRun=1;HaplotypeScore=111.0434;InbreedingCoeff=0.9895;MQ=85.08;MQ0=0;MQRankSum=-1.348;QD=30.09;ReadPosRankSum=3.026;VQSLOD=3.5117;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:65,0:65:99:0,193,3028	0/0:11,0:11:33.11:0,33,526	0/0:28,0:28:84.26:0,84,1300	0/0:38,0:38:99:0,114,1707	1/1:1,19:20:57.17:682,57,0	0/0:15,0:15:45.14:0,45,693	0/0:27,0:27:81.24:0,81,1218	0/0:38,0:38:99:0,114,1798	0/0:25,0:25:72.25:0,72,1141	0/0:28,0:28:81.25:0,81,1229	0/0:14,0:14:33.09:0,33,502	0/0:22,0:22:63.21:0,63,1004	0/0:16,0:16:48.15:0,48,742	0/0:18,0:18:54.17:0,54,815	0/0:22,0:22:66.16:0,66,1012	0/0:16,0:16:45.15:0,45,704	0/0:31,0:31:87.30:0,87,1382	0/0:23,0:23:69.23:0,69,1094	0/0:25,0:25:75.26:0,75,1191	0/0:18,0:18:54.17:0,54,832	0/0:55,0:55:99:0,163,2536	0/0:20,0:20:57.19:0,57,896	0/0:15,0:15:45.15:0,45,718	0/0:18,0:18:54.14:0,54,834	1/1:0,7:7:21.06:251,21,0	0/0:22,0:22:66.20:0,66,1011	0/0:14,0:14:42.13:0,42,641	0/0:5,0:5:15.05:0,15,239
chr10	10383518	.	G	GACCTGAGAAGTTGAAATTCCACAG	1655.61	PASS	AB=0.714;AC=21;AF=0.955;AN=22;BaseQRankSum=-2.097;DP=32;FS=8.751;HRun=0;HaplotypeScore=22.9505;InbreedingCoeff=-0.1961;MQ=132.74;MQ0=0;MQRankSum=-2.336;QD=78.84;ReadPosRankSum=-0.180;VQSLOD=1.0424;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,0:1:3.01:50,3,0	./.	1/1:1,1:3:9.03:467,9,0	0/1:3,1:5:37.46:591,0,37	1/1:1,0:1:3.01:55,3,0	./.	./.	./.	./.	1/1:1,0:1:3.01:53,3,0	1/1:1,0:1:3.01:54,3,0	./.	./.	./.	./.	1/1:1,0:1:3:25,3,0	./.	./.	./.	./.	1/1:2,0:2:6.02:216,6,0	1/1:1,0:1:3.01:50,3,0	./.	1/1:2,0:2:5.96:45,6,0	./.	1/1:3,0:3:9.02:130,9,0	./.	./.
chr10	10385049	.	C	CT	4068.69	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-13.051;DP=590;FS=3.467;HRun=5;HaplotypeScore=59.3683;InbreedingCoeff=0.9986;MQ=75.98;MQ0=0;MQRankSum=1.044;QD=32.04;ReadPosRankSum=-1.723;VQSLOD=3.6714;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,132,1377	0/0:11,0:11:33.03:0,33,341	0/0:16,0:16:25.85:0,26,222	0/0:14,0:14:40.29:0,40,396	1/1:0,11:11:33.04:406,33,0	0/0:22,1:23:60.13:0,60,635	0/0:27,0:27:72.15:0,72,756	1/1:1,31:32:93.25:1153,93,0	0/0:13,0:13:33.06:0,33,346	0/0:18,0:18:51.07:0,51,520	0/0:12,0:12:29.29:0,29,297	0/0:18,0:18:51.05:0,51,525	0/0:19,0:19:54.06:0,54,545	0/0:23,0:23:63.11:0,63,653	0/0:21,0:21:57.12:0,57,598	0/0:17,0:17:51.13:0,51,547	0/0:36,0:36:99:0,105,1103	0/0:24,0:24:63.14:0,63,669	1/1:2,19:22:57.14:696,57,0	1/1:1,18:19:48.05:590,48,0	1/1:7,26:33:72.23:947,72,0	0/0:16,0:16:45.11:0,45,482	0/0:17,0:17:42.10:0,42,451	0/0:31,0:31:90.14:0,90,936	1/1:1,9:10:21.07:276,21,0	0/0:21,0:21:56.50:0,56,582	0/0:28,0:28:72.09:0,72,733	0/0:12,0:12:36.05:0,36,367
chr10	10385229	.	GCTCTCTCT	G	3462.26	PASS	AB=0.965;AC=38;AF=0.704;AN=54;BaseQRankSum=-0.303;DP=485;FS=6.279;HRun=0;HaplotypeScore=123.8887;InbreedingCoeff=0.2477;MQ=69.60;MQ0=22;MQRankSum=0.641;QD=9.98;ReadPosRankSum=1.208;VQSLOD=1.3554;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:29:99:238,0,177	1/1:6,0:5:3.01:40,3,0	0/0:26,0:19:3.01:0,3,93	0/0:32,0:19:0:0,0,0	0/0:7,0:12:3.01:0,3,40	1/1:3,3:7:3.01:68,3,0	1/1:15,7:23:6.02:135,6,0	1/1:23,0:22:5.81:50,6,0	./.	1/1:12,3:14:9.03:180,9,0	0/0:10,0:14:8.95:0,9,68	1/1:6,0:14:3.01:39,3,0	1/1:11,0:11:15.04:227,15,0	1/1:9,0:9:12.01:133,12,0	1/1:13,0:11:4.98:136,5,0	0/1:14,0:14:4.85:260,0,5	0/1:19,0:18:88.46:428,0,88	1/1:6,10:16:3.01:73,3,0	1/1:13,0:14:8.86:211,9,0	0/0:8,0:15:9.37:0,9,60	1/1:26,0:24:12.04:151,12,0	1/1:9,6:14:0.47:1,0,0	1/1:5,0:11:3.28:29,3,0	0/0:14,13:22:2.04:0,2,6	0/1:18,1:17:26.40:95,0,26	1/1:13,0:25:13.26:520,13,0	1/1:18,0:16:0.08:311,0,0	1/1:13,0:13:12.03:139,12,0
chr10	10385271	.	TCA	T	992.04	PASS	AB=1.000;AC=41;AF=0.976;AN=42;BaseQRankSum=0.556;DP=459;FS=0.000;HRun=0;HaplotypeScore=97.7522;InbreedingCoeff=-0.1031;MQ=46.66;MQ0=49;MQRankSum=-1.340;QD=2.46;ReadPosRankSum=1.275;VQSLOD=1.9262;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:30,13:40:2.88:15,3,0	./.	./.	./.	./.	1/1:15,0:13:2.95:20,3,0	1/1:26,0:21:2.65:16,3,0	./.	1/1:14,1:14:2.87:15,3,0	1/1:11,0:9:2.98:23,3,0	1/1:18,0:16:5.87:47,6,0	1/1:19,0:18:14.87:104,15,0	1/1:11,0:11:2.73:17,3,0	1/1:13,0:13:8.21:56,8,0	1/1:16,0:13:8.79:68,9,0	1/1:12,0:12:8.75:69,9,0	1/1:21,0:16:2.99:23,3,0	1/1:20,0:19:14.91:112,15,0	./.	1/1:13,0:13:11.84:78,12,0	1/1:32,0:27:11.87:80,12,0	1/1:16,0:15:5.93:40,6,0	1/1:15,0:12:8.91:62,9,0	1/1:33,0:25:17.83:123,18,0	./.	0/1:25,0:23:9.46:57,0,9	1/1:21,0:18:2.99:24,3,0	1/1:8,0:7:2.98:22,3,0
chr10	10388536	.	G	GA	279.41	PASS	AB=0.827;AC=5;AF=0.089;AN=56;BaseQRankSum=3.679;DP=541;FS=0.971;HRun=1;HaplotypeScore=44.2710;InbreedingCoeff=-0.1122;MQ=42.61;MQ0=45;MQRankSum=-5.411;QD=2.66;ReadPosRankSum=1.092;VQSLOD=-0.7084;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:32,2:32:29.62:30,0,659	0/0:8,0:8:24.08:0,24,311	0/0:34,0:12:33.11:0,33,423	0/0:32,0:14:42.14:0,42,541	0/0:15,0:13:39.13:0,39,501	0/0:15,0:13:30.10:0,30,389	0/0:19,0:17:38.15:0,38,473	0/0:26,0:23:66.21:0,66,854	0/0:8,0:8:15.05:0,15,194	0/0:13,0:13:39.13:0,39,506	0/0:14,0:12:21.07:0,21,272	0/0:17,0:15:21.07:0,21,272	0/1:11,6:16:56.57:57,0,317	0/1:16,10:25:99:215,0,301	0/1:16,1:16:34.98:35,0,281	0/0:15,0:14:21.03:0,21,254	0/0:26,0:23:54.18:0,54,701	0/0:25,1:25:9.28:0,9,617	0/0:21,0:8:27.07:0,27,336	0/1:8,3:10:59.66:60,0,281	0/0:25,0:25:69.22:0,69,884	0/0:15,0:14:36.12:0,36,467	0/0:13,0:13:36.12:0,36,463	0/0:32,0:31:81.25:0,81,1036	0/0:10,1:9:27.09:0,27,346	0/0:15,0:13:39.13:0,39,506	0/0:20,0:19:0.29:0,0,426	0/0:16,0:16:42.14:0,42,545
chr10	10394782	.	CTGTGTGTGTGTGTGTGTGTGTGTG	C	1413.63	PASS	AB=0.871;AC=14;AF=0.368;AN=38;BaseQRankSum=3.841;DP=372;FS=3.784;HRun=0;HaplotypeScore=99.9575;InbreedingCoeff=0.4937;MQ=29.26;MQ0=76;MQRankSum=-1.519;QD=12.51;ReadPosRankSum=1.758;VQSLOD=1.8532;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:17:0.47:0,0,1	./.	./.	./.	./.	0/0:17,0:11:6.02:0,6,388	0/0:23,0:18:4.84:0,5,303	0/0:21,0:18:6.02:0,6,248	0/0:19,0:13:11.12:0,11,481	1/1:17,2:17:4.59:436,5,0	./.	1/1:7,0:8:2.97:20,3,0	1/1:5,0:5:9.03:462,9,0	0/0:10,0:8:0.47:0,0,1	./.	0/0:9,0:7:0.47:0,0,1	1/1:20,0:14:5.99:206,6,0	0/0:12,0:7:3.90:0,4,58	0/0:14,0:11:10.85:0,11,678	0/0:5,0:3:6.02:0,6,588	0/0:40,0:28:3.95:0,4,289	./.	./.	0/1:16,4:15:0:0,0,0	0/1:9,0:6:0:0,0,0	1/1:12,4:14:4.31:268,4,0	1/1:6,0:7:3.01:138,3,0	./.
chr10	10394970	.	AGT	A	697.38	PASS	AB=0.853;AC=29;AF=0.806;AN=36;BaseQRankSum=-0.511;DP=371;FS=4.319;HRun=0;HaplotypeScore=57.2406;InbreedingCoeff=0.0231;MQ=66.20;MQ0=22;MQRankSum=2.064;QD=3.06;ReadPosRankSum=-0.549;VQSLOD=1.5223;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:16,12:26:6.96:56,0,7	1/1:3,0:3:2.72:22,3,0	./.	./.	./.	./.	0/1:20,0:18:3.27:67,0,3	./.	1/1:6,0:6:2.99:24,3,0	1/1:4,0:4:2.97:20,3,0	./.	./.	./.	0/1:3,3:6:0.01:0,0,0	1/1:3,1:3:3.01:31,3,0	1/1:4,0:4:2.84:14,3,0	1/1:17,14:31:11.95:129,12,0	1/1:13,0:13:5.47:42,5,0	1/1:10,0:10:2.22:7,2,0	./.	1/1:27,0:27:0.36:1,0,0	0/1:8,0:8:8.15:8,0,19	./.	1/1:25,0:25:26.80:229,27,0	0/0:8,0:8:2.97:0,3,20	0/1:13,0:13:31.93:61,0,32	1/1:12,4:15:6.01:62,6,0	1/1:7,0:4:2.99:23,3,0
chr10	10395017	.	GCGCGCGCGCGCGCGCGCA	G	734.03	PASS	AB=1.000;AC=6;AF=0.107;AN=56;BaseQRankSum=3.948;DP=338;FS=18.490;HRun=0;HaplotypeScore=120.1534;InbreedingCoeff=0.2654;MQ=51.10;MQ0=20;MQRankSum=-3.493;QD=14.68;ReadPosRankSum=-2.069;VQSLOD=1.0194;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:27:30.10:0,30,2026	0/0:7,0:7:12.04:0,12,822	0/0:6,0:4:3.64:0,4,12	0/0:1,0:1:3.01:0,3,58	0/0:4,6:10:0.47:0,0,1	0/0:13,0:12:17.95:0,18,1087	0/0:19,0:16:24.54:0,25,1004	0/1:8,0:7:5.59:263,0,6	0/0:8,0:6:6.91:0,7,427	0/0:8,0:7:15.05:0,15,1117	0/0:11,0:11:5.25:0,5,434	0/0:3,0:2:6.02:0,6,372	0/0:6,0:5:2.01:0,2,230	1/1:5,0:5:0.40:1,0,0	0/0:3,0:2:2.94:0,3,218	0/0:7,0:5:12.04:0,12,714	0/0:32,0:30:54.13:0,54,4005	0/0:18,0:16:43.70:0,44,2741	0/1:10,0:10:9.89:557,0,10	0/0:5,0:5:0:0,0,0	1/1:27,0:20:0.58:2,1,0	0/0:15,0:14:24.08:0,24,1703	0/0:10,0:10:18.06:0,18,1288	0/0:36,0:32:63.61:0,64,3988	0/0:5,2:7:2.98:0,3,22	0/0:16,0:15:30.10:0,30,1541	0/0:8,0:8:9.03:0,9,667	0/0:10,0:10:21.07:0,21,1369
chr10	10395019	.	GCGCGCGCGCGCGCGCA	G	886.95	PASS	AC=6;AF=0.111;AN=54;BaseQRankSum=4.396;DP=334;FS=12.914;HRun=0;HaplotypeScore=111.4139;InbreedingCoeff=0.5774;MQ=53.40;MQ0=19;MQRankSum=-3.417;QD=38.56;ReadPosRankSum=-1.637;VQSLOD=1.3137;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:26:33.11:0,33,1958	0/0:8,0:8:15.05:0,15,926	0/0:7,0:5:6.57:0,7,56	0/0:1,0:1:3.01:0,3,41	0/0:10,0:10:0.47:0,0,1	0/0:14,0:13:17.95:0,18,964	0/0:19,0:16:21.07:0,21,849	1/1:3,5:7:14.91:336,15,0	0/0:8,0:6:6.91:0,7,377	0/0:8,0:7:15.05:0,15,995	0/0:12,0:12:8.19:0,8,579	0/0:3,0:2:6.02:0,6,328	0/0:5,0:5:2.31:0,2,214	1/1:5,0:5:0.42:1,0,0	0/0:4,0:3:5.95:0,6,270	0/0:9,0:7:18.06:0,18,984	0/0:34,0:32:60.10:0,60,3901	0/0:18,0:16:41.93:0,42,2408	1/1:4,6:10:17.99:663,18,0	./.	0/0:13,11:17:0:0,0,0	0/0:14,0:13:24.08:0,24,1505	0/0:8,0:8:18.06:0,18,1139	0/0:34,0:30:57.67:0,58,3482	0/0:7,0:7:2.90:0,3,16	0/0:16,0:15:30.09:0,30,1253	0/0:6,0:6:9.03:0,9,589	0/0:10,0:10:21.07:0,21,1198
chr10	10395164	.	T	TA	7364.93	PASS	AB=1.000;AC=52;AF=0.963;AN=54;BaseQRankSum=-0.004;DP=225;FS=6.127;HRun=5;HaplotypeScore=95.8789;InbreedingCoeff=0.0841;MQ=69.38;MQ0=0;MQRankSum=-3.970;QD=32.73;ReadPosRankSum=3.136;VQSLOD=4.9651;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,18:18:48.16:667,48,0	1/1:0,1:1:3.01:42,3,0	0/1:14,0:11:63.26:63,0,112	0/1:10,0:6:4.57:5,0,45	1/1:0,4:4:12.04:165,12,0	1/1:0,13:13:36.12:507,36,0	1/1:0,14:14:36.12:505,36,0	1/1:0,18:18:54.07:702,54,0	1/1:0,8:8:24.08:337,24,0	1/1:0,5:5:15.05:215,15,0	1/1:0,3:3:6.02:84,6,0	1/1:0,7:7:20.80:265,21,0	1/1:0,11:11:33.11:459,33,0	1/1:0,5:5:12.04:171,12,0	1/1:0,5:5:15.05:211,15,0	1/1:0,6:6:12.04:169,12,0	1/1:0,13:13:30.10:423,30,0	1/1:0,6:6:18.06:255,18,0	1/1:0,6:6:17.81:189,18,0	1/1:1,6:7:18.05:236,18,0	1/1:0,2:2:3.01:42,3,0	1/1:0,6:6:12.04:169,12,0	1/1:0,5:5:12.04:166,12,0	1/1:1,9:10:18.06:252,18,0	1/1:0,6:6:18.06:254,18,0	1/1:0,11:11:30.10:429,30,0	1/1:0,11:11:27.09:382,27,0	./.
chr10	10395165	.	C	CA	1017.77	PASS	AB=0.882;AC=51;AF=0.944;AN=54;BaseQRankSum=2.863;DP=214;FS=9.295;HRun=0;HaplotypeScore=116.6993;InbreedingCoeff=0.1983;MQ=69.50;MQ0=0;MQRankSum=-5.533;QD=4.76;ReadPosRankSum=5.315;VQSLOD=2.6612;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:17:32.89:105,33,0	1/1:1,0:1:2.22:7,2,0	0/1:9,5:11:95.75:96,0,136	0/1:9,1:6:2.40:2,0,53	1/1:4,0:4:9.43:32,9,0	1/1:13,0:13:24.24:76,24,0	1/1:12,0:12:26.73:85,27,0	1/1:16,0:16:15.62:46,16,0	1/1:8,0:8:16.96:54,17,0	1/1:5,0:5:6.66:18,7,0	1/1:2,0:2:4.87:17,5,0	1/1:7,0:7:5.21:30,5,0	1/1:11,0:11:23.76:77,24,0	1/1:5,0:5:8.79:29,9,0	1/1:6,0:6:11.25:36,11,0	1/1:6,0:6:8.70:28,9,0	1/1:10,0:10:21.59:68,22,0	1/1:7,0:7:8.04:20,8,0	0/1:6,0:6:2.25:2,0,5	1/1:7,0:7:13.32:42,13,0	1/1:2,0:2:2.37:8,2,0	1/1:5,0:5:9.31:30,9,0	1/1:4,0:4:9.33:31,9,0	1/1:10,0:10:14.32:50,14,0	1/1:6,0:6:12.77:40,13,0	1/1:11,0:11:15.17:41,15,0	1/1:9,0:9:17.33:52,17,0	./.
chr10	10395390	.	AGTG	A	1348.80	PASS	AB=0.667;AC=11;AF=0.196;AN=56;BaseQRankSum=5.010;DP=337;FS=27.552;HRun=0;HaplotypeScore=123.5184;InbreedingCoeff=0.7340;MQ=67.29;MQ0=0;MQRankSum=-3.945;QD=16.06;ReadPosRankSum=-0.163;VQSLOD=1.6068;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:24.33:0,24,541	0/0:9,0:9:21.07:0,21,503	0/1:17,0:11:5.32:5,0,423	0/0:17,0:16:23.57:0,24,486	1/1:1,20:21:8.61:134,9,0	0/0:6,0:6:3.01:0,3,74	0/0:23,0:23:46.08:0,46,1035	1/1:0,14:14:42.13:743,42,0	0/0:16,0:16:28.32:0,28,631	0/0:8,0:8:24.08:0,24,591	0/0:14,0:14:21.54:0,22,517	0/0:12,0:12:21.07:0,21,477	0/0:11,0:11:15.05:0,15,368	0/0:12,0:12:14.63:0,15,303	0/0:8,0:8:15.05:0,15,368	0/0:12,0:12:14.61:0,15,368	0/0:10,0:10:24.29:0,24,527	0/0:9,0:9:23.62:0,24,591	1/1:0,9:9:27.09:502,27,0	1/1:0,9:9:5.82:112,6,0	0/1:0,9:9:0.01:0,0,1	0/0:10,0:10:21.53:0,22,444	0/0:13,0:13:27.09:0,27,638	0/0:14,0:14:15.52:0,16,327	0/1:0,5:5:0:0,0,0	0/0:10,0:10:30.10:0,30,735	0/0:12,0:12:24.08:0,24,564	0/0:7,0:7:18.06:0,18,443
chr10	10395401	.	ACGAGCGCGCGCGCG	A	1103.84	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=6.668;DP=293;FS=9.113;HRun=0;HaplotypeScore=140.6872;InbreedingCoeff=0.7352;MQ=66.17;MQ0=2;MQRankSum=-5.047;QD=18.10;ReadPosRankSum=0.814;VQSLOD=2.0399;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:15.94:0,16,980	0/0:6,0:6:14.99:0,15,575	0/0:11,0:5:1.10:0,1,3	0/0:13,0:10:11.97:0,12,217	1/1:15,5:20:8.51:140,9,0	0/0:5,0:5:6.02:0,6,330	0/0:14,0:14:22.84:0,23,1041	1/1:7,2:9:12.04:493,12,0	0/0:14,0:14:15.87:0,16,621	0/0:7,0:7:21.07:0,21,1265	0/0:12,0:12:15.94:0,16,861	0/0:11,0:11:12.04:0,12,588	0/0:11,0:11:12.02:0,12,513	0/0:13,0:13:8.56:0,9,494	0/0:7,0:7:12.04:0,12,704	0/0:12,0:12:9.38:0,9,413	0/0:11,0:11:22.01:0,22,792	0/0:9,0:9:23.62:0,24,1114	1/1:7,2:9:21.07:557,21,0	1/1:7,2:9:3:25,3,0	1/1:8,1:9:2.04:6,2,0	0/0:8,0:8:12.93:0,13,640	0/0:12,0:12:18.06:0,18,762	0/0:13,0:13:9.90:0,10,464	1/1:4,1:5:2.86:34,3,0	0/0:13,0:13:36.12:0,36,2203	0/0:9,0:9:15.05:0,15,817	0/0:7,0:7:18.06:0,18,1045
chr10	10395404	.	AGCGCGCGCGCG	A	795.37	PASS	AB=0.769;AC=10;AF=0.185;AN=54;BaseQRankSum=6.711;DP=281;FS=3.563;HRun=0;HaplotypeScore=122.5317;InbreedingCoeff=0.6256;MQ=64.93;MQ0=2;MQRankSum=-4.617;QD=15.91;ReadPosRankSum=1.644;VQSLOD=1.8419;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:15.94:0,16,834	0/0:6,0:6:11.97:0,12,461	0/0:13,0:5:2.43:0,2,21	0/0:12,0:9:11.47:0,11,138	1/1:5,6:15:8.15:151,8,0	0/0:7,0:7:6.02:0,6,328	0/0:15,0:15:22.81:0,23,806	1/1:2,1:4:12.04:347,12,0	0/0:15,0:15:13.03:0,13,501	0/0:8,0:8:21.07:0,21,1130	0/0:12,0:13:15.94:0,16,717	0/0:11,0:11:12.03:0,12,463	0/0:11,0:11:9.03:0,9,408	0/0:15,0:15:8.84:0,9,404	0/0:8,0:8:12.04:0,12,577	0/1:14,0:14:12.81:13,0,272	0/0:10,0:10:19.42:0,19,707	0/0:8,0:8:20.61:0,21,911	1/1:2,0:7:21.07:416,21,0	./.	0/1:1,3:7:0:0,0,0	0/0:9,0:9:12.92:0,13,511	0/0:11,0:11:18.06:0,18,674	0/0:13,0:13:9.92:0,10,379	1/1:1,1:3:2.22:8,2,0	0/0:13,0:13:36.12:0,36,1973	0/0:7,0:7:15.05:0,15,714	0/0:7,0:7:18.06:0,18,881
chr10	10395437	.	ACTTTAATAACTATTT	A	2105.72	PASS	AB=0.962;AC=25;AF=0.521;AN=48;BaseQRankSum=1.231;DP=308;FS=0.936;HRun=0;HaplotypeScore=162.0966;InbreedingCoeff=0.0925;MQ=35.12;MQ0=5;MQRankSum=-0.668;QD=11.14;ReadPosRankSum=0.613;VQSLOD=2.7695;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:14,1:15:2.59:8,0,3	0/1:7,0:7:0:0,0,0	0/0:11,0:2:6.02:0,6,194	0/0:5,0:1:3.01:0,3,38	0/0:16,2:18:7.38:0,7,96	0/1:13,0:13:5.09:19,0,5	0/0:14,1:15:1.63:0,2,21	0/0:7,0:7:15.17:0,15,475	0/1:17,0:17:6.55:40,0,7	0/1:10,0:10:99:114,0,107	./.	1/1:14,0:14:6.02:222,6,0	1/1:9,1:10:3.01:125,3,0	0/1:14,0:14:0:0,0,0	./.	1/1:15,0:14:5.38:66,5,0	0/0:11,0:11:6.60:0,7,25	1/1:3,1:4:7.78:159,8,0	0/1:11,2:13:99:491,0,409	0/0:11,2:13:0.33:0,0,8	1/1:9,0:8:3.50:13,3,0	./.	./.	1/1:12,0:12:2.37:8,2,0	1/1:5,0:5:1.40:102,1,0	0/1:15,1:15:99:307,0,199	0/1:9,1:10:45.09:445,0,45	1/1:5,0:5:3.01:118,3,0
chr10	10395438	.	CTTTAATA	C	1063.57	PASS	AB=0.721;AC=17;AF=0.386;AN=44;BaseQRankSum=5.461;DP=176;FS=11.872;HRun=0;HaplotypeScore=107.4774;InbreedingCoeff=0.0886;MQ=39.34;MQ0=4;MQRankSum=-2.329;QD=15.19;ReadPosRankSum=4.010;VQSLOD=1.6290;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:7,2:10:5.80:0,6,21	./.	0/0:9,0:2:6.02:0,6,153	0/0:4,0:1:3.01:0,3,43	0/0:8,3:13:7.24:0,7,73	0/1:4,2:7:2.42:20,0,2	0/0:5,4:9:9.48:0,9,41	0/0:6,0:6:18.06:0,18,343	0/1:5,4:9:7.94:17,0,8	0/1:1,1:3:49.42:77,0,49	./.	1/1:1,7:9:6.01:85,6,0	1/1:3,1:4:3.01:76,3,0	./.	./.	1/1:2,2:4:0.17:35,0,0	0/0:5,0:5:8.13:0,8,35	1/1:1,1:2:3.01:63,3,0	0/1:9,2:11:99:241,0,298	0/0:4,5:9:5.34:0,5,23	0/0:5,0:4:3.38:0,3,8	./.	./.	0/0:5,3:8:1.25:0,1,3	0/1:2,2:5:3.58:75,0,4	0/1:5,1:6:99:166,0,134	0/1:5,3:8:14.18:262,0,14	1/1:0,1:1:3.01:78,3,0
chr10	10395445	.	A	AC	280.92	PASS	AB=0.905;AC=27;AF=0.643;AN=42;BaseQRankSum=3.261;DP=160;FS=12.979;HRun=0;HaplotypeScore=125.4984;InbreedingCoeff=0.3505;MQ=40.09;MQ0=2;MQRankSum=-1.952;QD=2.87;ReadPosRankSum=3.690;VQSLOD=2.5113;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,1:10:0.47:1,0,0	./.	0/0:9,0:2:6.02:0,6,72	0/0:3,0:1:3.01:0,3,39	0/1:12,0:12:0.25:1,0,0	0/1:3,2:5:0:0,0,0	1/1:9,0:9:1.70:38,2,0	0/0:6,0:6:13.92:0,14,86	1/1:5,2:9:3.01:46,3,0	1/1:3,0:3:5.52:20,6,0	./.	1/1:7,1:8:2.88:15,3,0	1/1:2,1:4:3.01:44,3,0	./.	./.	1/1:3,1:4:3.01:44,3,0	1/1:3,1:4:0.47:1,0,0	0/0:2,0:2:2.04:0,2,6	0/1:10,0:10:2.26:2,0,35	0/0:9,0:9:1.25:0,1,3	./.	./.	./.	0/0:4,0:5:2.04:0,2,6	1/1:5,0:5:2.80:13,3,0	1/1:5,1:6:0.02:50,0,0	1/1:6,1:8:13.83:110,14,0	1/1:1,0:1:2.50:9,2,0
chr10	10395447	.	CT	C	145.53	PASS	AC=24;AF=0.857;AN=28;BaseQRankSum=2.634;DP=113;FS=6.358;HRun=1;HaplotypeScore=86.9851;InbreedingCoeff=0.3500;MQ=43.75;MQ0=1;MQRankSum=-2.801;QD=2.85;ReadPosRankSum=2.216;VQSLOD=-0.1905;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:7,1:2:5.99:0,6,67	0/0:3,0:1:3.01:0,3,42	./.	./.	1/1:2,4:6:2.97:20,3,0	./.	1/1:4,4:8:2.04:6,2,0	1/1:1,1:2:5.46:30,5,0	./.	1/1:1,7:8:1.82:5,2,0	1/1:3,1:4:2.50:9,2,0	./.	./.	1/1:1,2:3:1.82:5,2,0	./.	1/1:1,1:2:2.22:7,2,0	1/1:2,2:4:10.32:50,10,0	./.	./.	./.	./.	./.	1/1:1,2:3:2.50:9,2,0	1/1:2,1:3:6.96:30,7,0	1/1:4,3:7:11.51:51,12,0	1/1:0,1:1:2.94:18,3,0
chr10	10395449	.	ATTT	A	699.44	PASS	AB=0.545;AC=23;AF=0.821;AN=28;BaseQRankSum=2.568;DP=112;FS=2.688;HRun=3;HaplotypeScore=85.8600;InbreedingCoeff=0.3432;MQ=43.93;MQ0=1;MQRankSum=-2.809;QD=13.71;ReadPosRankSum=2.167;VQSLOD=0.6697;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:7,0:2:6:0,6,73	0/0:3,0:1:3.01:0,3,41	./.	./.	0/1:1,5:6:0:0,0,0	./.	1/1:4,4:8:3:25,3,0	1/1:0,1:2:6.02:86,6,0	./.	1/1:1,7:8:3:28,3,0	1/1:3,1:4:3.01:45,3,0	./.	./.	1/1:1,2:3:3.01:51,3,0	./.	1/1:1,1:2:5.97:51,6,0	1/1:2,2:4:12.01:124,12,0	./.	./.	./.	./.	./.	1/1:1,2:3:3.01:36,3,0	1/1:2,1:3:9.02:99,9,0	1/1:3,3:7:18:213,18,0	1/1:0,1:1:3.01:37,3,0
chr10	10398554	.	T	TCA	244.23	PASS	AB=0.941;AC=12;AF=0.250;AN=48;BaseQRankSum=-3.093;DP=479;FS=1.341;HRun=0;HaplotypeScore=87.4035;InbreedingCoeff=0.0670;MQ=61.98;MQ0=7;MQRankSum=1.424;QD=1.47;ReadPosRankSum=-0.245;VQSLOD=1.5982;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:21:2.84:0,3,14	0/0:3,0:3:3.01:0,3,32	./.	./.	0/0:5,0:8:0:0,0,0	0/1:18,0:18:28.63:33,0,29	1/1:23,0:22:3.01:42,3,0	./.	0/1:17,3:20:25.97:38,0,26	0/0:20,0:20:3:0,3,32	0/0:8,0:9:3.31:0,3,14	0/0:16,0:17:11.86:0,12,110	0/0:11,0:13:2.80:0,3,13	0/0:16,0:16:6.01:0,6,64	0/1:21,2:23:32.12:32,0,66	0/0:14,0:14:12.02:0,12,128	0/0:15,0:15:14.71:0,15,160	0/1:23,0:24:3:3,0,264	0/0:8,0:9:2.84:0,3,14	./.	0/0:40,0:40:0.47:0,0,1	0/1:11,1:12:34.99:35,0,47	0/0:8,0:10:5.85:0,6,44	0/0:23,0:26:11.68:0,12,92	0/0:8,0:10:5.68:0,6,28	1/1:18,6:23:9.48:113,9,0	0/1:11,1:13:30.76:36,0,31	1/1:8,0:8:2.98:41,3,0
chr10	10399236	.	CGTAAA	C	1980.83	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=10.325;DP=470;FS=4.038;HRun=0;HaplotypeScore=120.8605;InbreedingCoeff=0.9779;MQ=70.76;MQ0=0;MQRankSum=-11.017;QD=18.01;ReadPosRankSum=0.835;VQSLOD=3.3855;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:87.30:0,87,1800	0/0:8,0:8:24.05:0,24,430	0/0:14,0:12:29.76:0,30,495	0/0:12,0:14:35.58:0,36,512	1/1:5,0:16:19.71:130,20,0	0/0:17,0:17:51.17:0,51,1053	0/0:23,0:23:69.16:0,69,1388	1/1:12,13:25:45.48:679,45,0	0/0:19,0:19:51.09:0,51,945	0/0:21,0:21:60.19:0,60,1219	0/0:9,0:9:27.09:0,27,584	0/0:11,0:11:30.10:0,30,614	0/0:14,0:14:42.14:0,42,934	0/0:18,0:18:51.17:0,51,1052	0/0:12,0:12:36.12:0,36,804	0/0:15,0:15:45.10:0,45,903	0/0:24,0:24:69.24:0,69,1446	0/0:14,0:14:42.14:0,42,911	1/1:3,9:12:9.65:282,10,0	1/1:5,16:21:39.16:639,39,0	1/1:11,5:16:10.21:121,10,0	0/0:14,0:14:38.16:0,38,785	0/0:18,0:18:54.19:0,54,1175	0/0:14,0:14:36.08:0,36,767	1/1:2,1:20:40.11:311,40,0	0/0:19,0:19:57.19:0,57,1160	0/0:21,0:20:54.12:0,54,1009	0/0:10,0:11:27.98:0,28,533
chr10	10399238	.	TA	T	3859.54	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-2.651;DP=470;FS=1.008;HRun=15;HaplotypeScore=79.0691;InbreedingCoeff=0.6865;MQ=71.76;MQ0=0;MQRankSum=-1.746;QD=8.81;ReadPosRankSum=5.615;VQSLOD=3.1005;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:12,20:32:47.16:307,47,0	1/1:3,3:7:9.21:59,9,0	0/0:18,0:14:13.78:0,14,85	0/0:12,0:13:20.11:0,20,130	1/1:16,0:16:14.21:41,14,0	1/1:5,13:18:35.41:231,35,0	1/1:7,12:22:39.41:242,39,0	1/1:24,0:24:26.07:76,26,0	1/1:2,14:16:31.61:210,32,0	1/1:4,16:20:41.25:268,41,0	1/1:1,9:10:23.59:154,24,0	1/1:5,7:13:16.72:102,17,0	1/1:6,7:13:20.52:134,21,0	1/1:5,13:18:35.43:231,35,0	1/1:3,7:11:22.62:140,23,0	1/1:4,12:16:26.53:173,27,0	1/1:5,15:22:45.38:281,45,0	1/1:4,10:14:29.51:192,30,0	1/1:11,0:11:12.20:36,12,0	1/1:21,0:21:26.43:78,26,0	1/1:15,0:15:3.66:11,4,0	1/1:6,8:15:4.87:103,5,0	1/1:8,10:18:8.96:152,9,0	1/1:3,9:12:0.24:127,0,0	1/1:20,0:20:26.90:77,27,0	1/1:8,12:20:11.35:187,11,0	1/1:9,13:22:25.51:171,26,0	1/1:6,5:11:11.36:76,11,0
chr10	10399437	.	GCACA	G	6708.91	PASS	AB=0.665;AC=38;AF=0.704;AN=54;BaseQRankSum=-8.399;DP=553;FS=4.518;HRun=0;HaplotypeScore=111.4546;InbreedingCoeff=0.5114;MQ=56.64;MQ0=14;MQRankSum=1.111;QD=16.86;ReadPosRankSum=2.275;VQSLOD=4.5897;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,13:27:4.18:158,4,0	1/1:4,4:8:9.03:144,9,0	./.	0/0:30,0:10:14.41:0,14,198	0/1:7,1:11:33.09:34,0,33	0/1:5,0:18:2.97:3,0,73	0/0:9,0:16:22.45:0,22,121	0/0:17,0:25:28.10:0,28,166	0/0:8,1:23:21.73:0,22,157	1/1:2,14:17:42.12:645,42,0	1/1:6,3:11:11.91:166,12,0	1/1:6,8:16:11.64:303,12,0	1/1:5,11:18:14.52:372,15,0	1/1:8,10:21:27.55:542,28,0	1/1:8,10:18:21.06:316,21,0	1/1:4,10:14:30.10:480,30,0	1/1:9,14:23:39.13:605,39,0	1/1:5,8:12:24.08:384,24,0	0/1:8,4:15:19.66:126,0,20	0/0:9,0:27:44.69:0,45,323	0/1:11,1:33:6.34:6,0,189	1/1:12,4:17:24.01:331,24,0	1/1:7,12:20:33.11:528,33,0	1/1:14,15:29:17.95:288,18,0	0/1:14,1:18:19.83:20,0,102	1/1:9,12:21:36.01:517,36,0	1/1:7,13:20:42.10:631,42,0	0/1:2,4:7:0.52:109,0,1
chr10	10399554	.	GAGAA	G	2505.53	PASS	AB=0.960;AC=11;AF=0.196;AN=56;BaseQRankSum=-1.853;DP=575;FS=2.956;HRun=0;HaplotypeScore=111.2574;InbreedingCoeff=0.8793;MQ=59.55;MQ0=12;MQRankSum=0.990;QD=15.37;ReadPosRankSum=1.705;VQSLOD=3.1700;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:32:63.76:0,64,729	0/0:8,0:8:21.02:0,21,209	0/0:13,0:11:19.31:0,19,244	0/0:24,0:12:36:0,36,384	1/1:11,0:11:14.52:122,15,0	0/0:17,0:17:20.55:0,21,354	0/0:21,0:21:31.35:0,31,502	1/1:35,0:34:74.74:676,75,0	0/0:21,0:20:53.53:0,54,690	0/0:28,0:28:76.96:0,77,782	0/0:10,0:10:25.86:0,26,299	0/0:25,0:24:72.03:0,72,807	0/0:22,0:22:60:0,60,637	0/0:19,0:18:50.67:0,51,431	0/0:20,0:20:48.55:0,49,529	0/0:16,0:16:41.99:0,42,421	0/0:19,0:18:47.96:0,48,584	0/0:12,0:12:30.06:0,30,416	1/1:1,20:21:60.51:510,61,0	0/1:23,1:24:22.04:84,0,22	1/1:57,0:56:99:1042,122,0	0/0:12,0:12:32.88:0,33,372	0/0:14,0:14:28.93:0,29,229	0/0:22,0:21:44.95:0,45,477	1/1:15,0:15:26.87:249,27,0	0/0:19,0:18:48.63:0,49,568	0/0:27,0:26:65.81:0,66,761	0/0:10,0:10:25.27:0,25,234
chr10	10399556	.	GAA	G	2577.39	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-2.008;DP=576;FS=2.866;HRun=4;HaplotypeScore=90.9095;InbreedingCoeff=0.9775;MQ=59.92;MQ0=12;MQRankSum=1.901;QD=16.21;ReadPosRankSum=1.221;VQSLOD=0.3344;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:60.66:0,61,550	0/0:9,0:9:15.25:0,15,120	0/0:14,0:11:19.31:0,19,244	0/0:24,0:12:36:0,36,384	1/1:10,0:10:14.22:122,14,0	0/0:16,0:16:34.01:0,34,273	0/0:20,0:20:41.92:0,42,444	1/1:37,0:36:86.57:758,87,0	0/0:20,0:19:50.99:0,51,536	0/0:28,0:28:72.02:0,72,669	0/0:11,0:11:28.69:0,29,259	0/0:26,0:25:72.03:0,72,697	0/0:22,0:22:56.21:0,56,516	0/0:21,0:20:56.51:0,57,473	0/0:20,0:20:47.09:0,47,443	0/0:17,0:17:44.99:0,45,427	0/0:21,0:20:43.77:0,44,420	0/0:11,0:11:29.18:0,29,299	1/1:20,1:21:62.62:520,63,0	1/1:2,22:24:8.70:64,9,0	1/1:51,1:52:99:1079,132,0	0/0:12,0:12:32.88:0,33,326	0/0:15,0:15:31.93:0,32,255	0/0:22,0:21:44.95:0,45,433	1/1:14,0:14:26.68:217,27,0	0/0:19,0:19:50.35:0,50,493	0/0:29,0:28:71.62:0,72,618	0/0:10,0:10:21:0,21,186
chr10	10401591	.	C	CTT	4939.92	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=14.525;DP=566;FS=3.507;HRun=7;HaplotypeScore=84.4209;InbreedingCoeff=0.9788;MQ=64.27;MQ0=0;MQRankSum=-5.484;QD=32.93;ReadPosRankSum=-3.006;VQSLOD=4.4238;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:33.10:0,33,384	0/0:11,0:11:27.07:0,27,315	0/0:8,0:6:11.73:0,12,95	0/0:11,0:11:8.21:0,8,66	1/1:2,19:22:48.57:694,49,0	0/0:29,0:29:81.20:0,81,922	0/0:15,0:15:45.13:0,45,524	1/1:12,31:43:99:1480,99,0	0/0:22,0:22:63.19:0,63,734	0/0:34,0:34:93.24:0,93,1067	0/0:22,0:22:60.17:0,60,699	0/0:23,0:23:63.18:0,63,734	0/0:17,0:17:48.14:0,48,559	0/0:16,0:16:48.14:0,48,559	0/0:15,0:15:42.11:0,42,479	0/0:22,0:22:51.13:0,51,594	0/0:20,0:20:57.15:0,57,652	0/0:14,0:14:39.12:0,39,454	1/1:5,12:19:48.14:717,48,0	1/1:9,18:28:69.11:999,69,0	1/1:5,13:18:24.08:383,24,0	0/0:19,0:19:51.14:0,51,582	0/0:25,0:25:66.19:0,66,769	0/0:11,0:11:33.08:0,33,373	1/1:3,15:17:42.14:667,42,0	0/0:29,0:29:75.21:0,75,874	0/0:30,0:30:69.18:0,69,804	0/0:11,0:11:33.10:0,33,384
chr10	10401894	.	T	TTAC	21625.53	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=9.572;DP=549;FS=4.660;HRun=0;HaplotypeScore=162.5087;InbreedingCoeff=0.9886;MQ=78.94;MQ0=0;MQRankSum=-10.435;QD=43.34;ReadPosRankSum=4.890;VQSLOD=6.1836;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,3:18:33.06:578,33,0	1/1:5,7:12:33.11:557,33,0	0/0:23,0:23:60.14:0,60,906	0/0:27,0:27:51.83:0,52,1116	1/1:16,10:26:51.17:887,51,0	1/1:18,16:34:93.31:1647,93,0	1/1:3,6:9:24.08:381,24,0	1/1:18,14:32:81.27:1302,81,0	1/1:8,10:18:54.18:918,54,0	1/1:10,13:23:66.22:1170,66,0	1/1:12,8:20:51.12:746,51,0	1/1:9,4:13:35.79:632,36,0	1/1:10,6:16:45.15:791,45,0	1/1:5,7:12:36.12:584,36,0	1/1:11,2:13:36.11:681,36,0	1/1:12,7:19:54.18:955,54,0	1/1:12,2:14:27.02:454,27,0	1/1:10,1:11:23.97:374,24,0	1/1:5,4:8:21.04:308,21,0	1/1:23,10:33:75.76:1404,76,0	1/1:23,3:26:39.07:756,39,0	1/1:10,11:22:60.19:980,60,0	1/1:16,10:27:75.25:1277,75,0	1/1:5,6:11:18.06:284,18,0	1/1:14,3:16:45.13:815,45,0	1/1:9,7:16:48.16:889,48,0	1/1:24,13:37:99:1834,105,0	1/1:7,2:9:21.07:418,21,0
chr10	10401900	.	ATGG	A	15767.49	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=9.817;DP=505;FS=8.732;HRun=0;HaplotypeScore=160.7193;InbreedingCoeff=0.9852;MQ=80.89;MQ0=0;MQRankSum=-11.114;QD=34.65;ReadPosRankSum=5.891;VQSLOD=4.8877;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,3:15:27.02:354,27,0	1/1:5,7:12:36.03:453,36,0	0/0:24,0:24:66.19:0,66,1487	0/0:26,0:26:78.27:0,78,1817	1/1:12,13:25:59.85:712,60,0	1/1:14,17:31:93.11:1185,93,0	1/1:0,8:8:20.95:180,21,0	1/1:0,27:27:81.24:1123,81,0	1/1:7,10:17:51.04:598,51,0	1/1:5,17:22:66.14:892,66,0	1/1:4,13:17:40.97:422,41,0	1/1:6,6:12:32.37:492,32,0	1/1:6,8:15:45.03:589,45,0	1/1:4,7:11:32.97:371,33,0	1/1:10,3:13:36.04:540,36,0	1/1:8,10:18:54.10:758,54,0	1/1:8,3:11:21.04:334,21,0	1/1:6,3:9:21.03:308,21,0	1/1:0,9:8:23.99:288,24,0	1/1:17,14:30:77.69:1044,78,0	1/1:21,3:24:31.33:498,31,0	1/1:7,13:20:59.77:653,60,0	1/1:12,14:26:77.89:938,78,0	1/1:4,6:10:17.95:217,18,0	1/1:8,6:13:39.06:562,39,0	1/1:8,7:15:45.11:622,45,0	1/1:18,17:35:99:1321,100,0	1/1:6,2:8:21.05:313,21,0
chr10	10402093	.	AT	A	2169.20	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=8.177;DP=597;FS=1.437;HRun=8;HaplotypeScore=64.9383;InbreedingCoeff=0.9976;MQ=72.55;MQ0=0;MQRankSum=-0.492;QD=21.91;ReadPosRankSum=-2.293;VQSLOD=3.2707;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:69.21:0,69,833	0/0:7,0:7:21.06:0,21,254	0/0:20,1:21:35.32:0,35,543	0/0:16,0:16:40.62:0,41,412	0/0:27,0:27:78.12:0,78,896	0/0:33,0:33:90.11:0,90,1019	0/0:7,0:7:21.06:0,21,254	1/1:2,27:29:81.09:769,81,0	0/0:18,0:18:51.09:0,51,598	0/0:24,0:24:66.20:0,66,789	0/0:25,0:25:60.13:0,60,698	0/0:14,0:14:36.11:0,36,435	0/0:16,0:16:42.13:0,42,507	0/0:23,0:23:63.18:0,63,751	0/0:24,0:24:66.19:0,66,785	0/0:17,0:17:45.13:0,45,533	0/0:25,0:26:59.30:0,59,754	0/0:20,0:20:57.14:0,57,672	1/1:5,18:23:50.55:471,51,0	1/1:1,31:32:77.72:714,78,0	1/1:1,14:15:39.06:377,39,0	0/0:14,0:14:42.13:0,42,507	0/0:23,0:23:60.18:0,60,715	0/0:17,0:18:48.01:0,48,558	0/0:14,0:14:36.11:0,36,435	0/0:28,0:28:78.23:0,78,933	0/0:41,0:41:99:0,120,1411	0/0:17,0:17:45.14:0,45,544
chr10	10402519	.	G	GT	4873.82	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-13.910;DP=561;FS=0.000;HRun=7;HaplotypeScore=52.3275;InbreedingCoeff=0.9893;MQ=63.88;MQ0=0;MQRankSum=0.450;QD=30.46;ReadPosRankSum=-2.074;VQSLOD=4.3497;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:63.09:0,63,608	0/0:5,0:5:15.02:0,15,145	0/0:11,0:10:25.18:0,25,221	0/0:10,0:10:13.22:0,13,135	1/1:3,26:29:78.24:942,78,0	0/0:19,0:19:54.08:0,54,521	0/0:6,0:6:18.03:0,18,174	1/1:8,34:42:99:1267,105,0	0/0:14,0:14:39.05:0,39,371	0/0:25,0:25:66.10:0,66,637	0/0:24,0:24:69.05:0,69,655	0/0:13,0:13:36.04:0,36,343	0/0:20,0:20:45.07:0,45,435	0/0:14,0:14:39.06:0,39,377	0/0:9,0:9:27.04:0,27,261	0/0:28,0:28:81.12:0,81,776	0/0:20,0:20:57.09:0,57,550	0/0:25,0:25:38.76:0,39,555	1/1:2,21:22:54.15:652,54,0	1/1:3,27:30:81.21:962,81,0	1/1:3,11:14:27.08:326,27,0	0/0:29,0:29:81.11:0,81,777	0/0:26,0:26:75.11:0,75,718	0/0:15,0:15:36.04:0,36,341	1/1:2,20:22:60.18:725,60,0	0/0:26,0:26:75.12:0,75,724	0/0:29,0:29:84.13:0,84,811	0/0:9,0:9:27.04:0,27,261
chr10	10402860	.	GGGGGC	G	2336.66	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=10.151;DP=503;FS=6.998;HRun=0;HaplotypeScore=100.9331;InbreedingCoeff=0.9771;MQ=82.14;MQ0=0;MQRankSum=-9.679;QD=35.95;ReadPosRankSum=-1.681;VQSLOD=2.7800;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,135,3757	0/0:4,0:4:9.03:0,9,243	0/0:27,0:26:66.19:0,66,1469	0/0:19,0:17:45.11:0,45,899	0/0:20,0:20:57.19:0,57,1683	0/0:18,0:18:45.15:0,45,1322	0/0:15,0:15:45.11:0,45,1240	1/1:3,15:18:45.09:819,45,0	0/0:22,0:22:66.23:0,66,1932	0/0:14,0:14:39.13:0,39,1083	0/0:7,0:7:21.07:0,21,621	0/0:17,0:17:42.13:0,42,1230	0/0:14,0:14:42.14:0,42,1233	0/0:18,0:18:42.12:0,42,1123	0/0:24,0:23:66.22:0,66,1932	0/0:16,0:16:48.16:0,48,1420	0/0:28,0:28:81.21:0,81,2279	0/0:12,0:12:33.11:0,33,972	1/1:1,7:8:18.06:367,18,0	1/1:4,17:21:45.15:881,45,0	1/1:5,13:18:21.07:429,21,0	0/0:20,0:20:57.16:0,57,1505	0/0:17,0:17:45.10:0,45,1167	0/0:23,0:23:69.24:0,69,2046	0/0:17,0:17:48.16:0,48,1375	0/0:14,0:14:39.13:0,39,1096	0/0:15,0:15:45.14:0,45,1231	0/0:9,0:9:18.06:0,18,533
chr10	10404158	.	CATAGAG	C	2645.75	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.560;DP=651;FS=2.025;HRun=0;HaplotypeScore=133.8825;InbreedingCoeff=0.9997;MQ=82.53;MQ0=0;MQRankSum=-9.497;QD=56.29;ReadPosRankSum=-0.187;VQSLOD=3.6760;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:75.26:0,75,2693	0/0:10,0:10:30.10:0,30,1099	0/0:19,0:19:54.18:0,54,1771	0/0:18,0:18:54.12:0,54,1603	1/1:0,30:30:75.25:1697,75,0	0/0:24,0:24:72.25:0,72,2552	0/0:20,0:20:60.21:0,60,2198	0/0:39,0:39:99:0,114,3997	0/0:20,0:20:60.21:0,60,2069	0/0:32,0:32:90.31:0,90,3101	0/0:22,0:22:66.20:0,66,2177	0/0:22,0:22:66.23:0,66,2375	0/0:22,0:22:66.21:0,66,2257	0/0:15,0:15:42.14:0,42,1502	0/0:21,0:21:63.22:0,63,2296	0/0:34,0:34:99:0,102,3737	0/0:18,0:18:54.66:0,55,1921	0/0:17,0:17:51.18:0,51,1851	0/0:16,0:16:48.15:0,48,1577	0/0:25,0:25:75.26:0,75,2661	0/0:19,0:19:57.20:0,57,2069	0/0:33,0:33:99:0,99,3494	0/0:30,0:30:90.31:0,90,3236	0/0:23,0:23:63.22:0,63,2292	1/1:1,16:17:45.15:1071,45,0	0/0:25,0:25:75.25:0,75,2657	0/0:30,0:30:90.31:0,90,3053	0/0:24,0:24:72.25:0,72,2637
chr10	10405639	.	TC	T	2796.15	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=10.105;DP=702;FS=0.413;HRun=6;HaplotypeScore=71.0346;InbreedingCoeff=0.9950;MQ=77.08;MQ0=0;MQRankSum=-0.724;QD=23.30;ReadPosRankSum=-0.463;VQSLOD=2.7894;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,126,1652	0/0:11,0:11:27.06:0,27,337	0/0:18,0:16:21.51:0,22,226	0/0:15,0:16:24.01:0,24,278	0/0:15,0:15:42.11:0,42,515	0/0:25,0:25:72.23:0,72,947	0/0:34,0:34:87.27:0,87,1128	1/1:9,9:18:24.05:257,24,0	0/0:37,0:37:99:0,106,1364	0/0:25,0:25:66.21:0,66,868	0/0:8,0:8:21.07:0,21,274	0/0:29,0:29:84.26:0,84,1090	0/0:32,0:32:84.27:0,84,1105	0/0:22,0:22:57.19:0,57,749	0/0:27,0:27:78.25:0,78,1026	0/0:23,0:23:63.20:0,63,825	0/0:46,0:46:99:0,123,1600	0/0:29,0:29:78.25:0,78,1024	1/1:5,20:25:57.13:604,57,0	1/1:1,9:10:24.06:257,24,0	1/1:3,64:67:99:1838,171,0	0/0:17,0:17:39.10:0,39,481	0/0:13,0:13:30.07:0,30,366	0/0:34,0:34:99:0,99,1288	0/0:13,0:13:30.09:0,30,381	0/0:24,0:24:69.22:0,69,895	0/0:29,0:29:87.24:0,87,1124	0/0:9,0:9:24.08:0,24,316
chr10	10406651	.	GGT	G	289.07	PASS	AB=0.932;AC=19;AF=0.380;AN=50;BaseQRankSum=3.952;DP=515;FS=9.550;HRun=0;HaplotypeScore=65.0486;InbreedingCoeff=0.0361;MQ=70.37;MQ0=13;MQRankSum=0.778;QD=1.08;ReadPosRankSum=1.486;VQSLOD=-0.1650;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:25,3:27:5.14:5,0,220	0/0:3,0:3:3.01:0,3,44	./.	./.	1/1:8,0:9:5.68:28,6,0	1/1:9,1:10:3.48:33,3,0	1/1:19,1:20:5.85:46,6,0	0/0:24,0:24:5.92:0,6,39	1/1:17,0:18:2.84:14,3,0	0/0:15,0:14:15.01:0,15,164	0/0:10,0:9:15.02:0,15,171	0/0:18,0:18:4.81:0,5,30	0/1:15,1:16:23.51:24,0,39	0/1:16,1:17:66.94:76,0,67	0/0:17,0:17:18.03:0,18,218	0/1:18,3:22:57.56:58,0,118	0/1:32,0:35:4.35:4,0,163	0/1:20,0:20:40.35:40,0,89	0/0:18,0:15:6.02:0,6,88	0/1:10,1:12:53.23:53,0,96	0/1:32,1:32:5.33:5,0,214	0/0:10,0:9:18.04:0,18,228	./.	0/0:40,0:39:0.75:0,1,216	1/1:8,0:8:5.68:28,6,0	0/1:17,0:17:23.20:23,0,62	0/0:20,0:26:6.01:0,6,70	0/0:12,0:12:21.04:0,21,274
chr10	10407604	.	ATCT	A	1962.54	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=8.872;DP=568;FS=4.785;HRun=0;HaplotypeScore=69.2839;InbreedingCoeff=0.9698;MQ=57.18;MQ0=14;MQRankSum=-1.530;QD=28.44;ReadPosRankSum=0.928;VQSLOD=3.5369;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:24:66.18:0,66,1438	0/0:14,0:14:42.14:0,42,949	0/0:20,0:3:9.03:0,9,195	0/0:25,0:4:12.04:0,12,233	0/0:20,0:20:60.21:0,60,1360	0/0:15,0:15:42.14:0,42,952	0/0:21,0:20:39.09:0,39,836	1/1:2,11:7:15.03:222,15,0	0/0:9,0:8:24.08:0,24,543	0/0:33,0:33:96.32:0,96,2119	0/0:23,0:22:66.23:0,66,1478	0/0:12,0:12:36.08:0,36,768	0/0:18,0:18:48.12:0,48,1040	0/0:12,0:11:30.10:0,30,662	0/0:24,0:24:72.25:0,72,1614	0/0:22,0:22:66.23:0,66,1479	0/0:26,0:26:66.20:0,66,1449	0/0:18,0:16:48.16:0,48,1062	1/1:3,7:9:24.08:400,24,0	1/1:2,21:21:51.17:849,51,0	1/1:1,22:20:38.93:650,39,0	0/0:25,0:23:60.21:0,60,1360	0/0:22,0:22:66.23:0,66,1493	0/0:26,0:26:72.25:0,72,1632	0/0:18,0:17:51.18:0,51,1156	0/0:31,0:29:87.30:0,87,1956	0/0:24,0:23:69.22:0,69,1506	0/0:16,0:16:45.15:0,45,1016
chr10	10408688	.	TTTGGTTGGTTGG	T	6631.18	PASS	AB=0.853;AC=42;AF=0.840;AN=50;BaseQRankSum=-1.501;DP=551;FS=0.862;HRun=0;HaplotypeScore=175.5810;InbreedingCoeff=0.4490;MQ=66.76;MQ0=12;MQRankSum=-5.270;QD=16.41;ReadPosRankSum=1.000;VQSLOD=4.0457;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:21,0:36:11.15:11,0,114	1/1:4,4:8:12.04:406,12,0	./.	./.	1/1:10,7:17:15.05:440,15,0	1/1:14,2:17:15.04:408,15,0	0/1:11,0:11:99:156,0,104	./.	1/1:12,6:18:6.02:202,6,0	1/1:17,8:25:24.04:631,24,0	1/1:8,5:13:9.03:251,9,0	1/1:9,4:13:3.01:102,3,0	1/1:5,8:12:11.96:406,12,0	1/1:8,7:16:12.04:388,12,0	1/1:16,6:20:2.94:101,3,0	1/1:10,4:13:9.03:305,9,0	1/1:26,7:32:12.04:388,12,0	1/1:8,3:11:6.02:203,6,0	0/0:16,0:19:12.04:0,12,289	0/0:10,0:18:33.10:0,33,730	0/0:18,0:29:18.06:0,18,426	1/1:12,3:14:9.03:305,9,0	1/1:14,8:22:8.35:302,8,0	1/1:17,7:24:2.45:101,2,0	1/1:14,7:20:9.03:305,9,0	1/1:8,8:16:21.07:615,21,0	1/1:20,9:29:10.41:404,10,0	1/1:8,0:8:6.02:200,6,0
chr10	10409515	.	ATG	A	1538.03	PASS	AB=0.810;AC=38;AF=0.679;AN=56;BaseQRankSum=-0.418;DP=584;FS=3.650;HRun=0;HaplotypeScore=96.7290;InbreedingCoeff=0.5475;MQ=71.76;MQ0=9;MQRankSum=4.513;QD=4.18;ReadPosRankSum=3.298;VQSLOD=1.6062;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:18,4:22:9.02:98,9,0	1/1:6,0:7:2.84:14,3,0	0/0:34,0:29:0:0,0,0	0/0:32,0:24:0:0,0,0	1/1:22,0:22:5.68:28,6,0	1/1:11,0:19:12.25:58,12,0	1/1:10,0:15:13.80:69,14,0	0/0:40,0:38:41.90:0,42,398	1/1:12,0:19:17.04:84,17,0	1/1:21,8:29:18.87:215,19,0	1/1:14,4:17:3.01:33,3,0	1/1:9,5:15:8.86:79,9,0	1/1:6,2:7:3.01:33,3,0	1/1:13,8:22:20.89:209,21,0	1/1:11,6:17:9.02:98,9,0	1/1:9,1:10:3.01:33,3,0	1/1:20,6:24:12.03:130,12,0	0/0:14,0:16:22:0,22,280	0/0:24,0:24:12.03:0,12,135	0/0:28,0:27:20.82:0,21,165	0/0:27,0:27:13.68:0,14,135	1/1:19,0:19:6.01:65,6,0	0/0:15,0:15:6:0,6,51	1/1:20,11:31:21.06:226,21,0	1/1:16,0:16:11.36:56,11,0	0/1:16,2:20:98.41:98,0,110	1/1:19,2:21:2.84:32,3,0	0/1:8,3:11:9.16:56,0,9
chr10	10409618	.	G	GGAA	7084.68	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-11.098;DP=562;FS=2.246;HRun=0;HaplotypeScore=82.7637;InbreedingCoeff=0.9993;MQ=80.50;MQ0=0;MQRankSum=-5.210;QD=47.55;ReadPosRankSum=-1.760;VQSLOD=5.8145;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:90.29:0,90,1348	0/0:9,0:9:27.09:0,27,422	0/0:15,0:16:32.27:0,32,428	0/0:34,0:33:83.74:0,84,1206	1/1:1,22:24:66.04:1273,66,0	0/0:17,0:17:48.15:0,48,728	0/0:25,0:25:60.20:0,60,938	1/1:9,27:36:81.23:1616,81,0	0/0:14,0:14:42.14:0,42,657	0/0:23,0:23:69.23:0,69,1078	0/0:26,0:26:66.21:0,66,1009	0/0:16,0:16:48.16:0,48,751	0/0:9,0:9:27.09:0,27,422	0/0:11,0:11:30.10:0,30,469	0/0:16,0:15:45.15:0,45,699	0/0:15,0:15:39.13:0,39,610	0/0:14,0:13:39.13:0,39,610	0/0:16,0:16:42.12:0,42,631	1/1:6,10:16:33.11:683,33,0	1/1:4,16:20:48.11:990,48,0	1/1:1,30:31:72.54:1465,73,0	0/0:22,0:22:54.18:0,54,844	0/0:17,0:17:45.11:0,45,671	0/0:16,0:16:48.16:0,48,748	1/1:1,20:21:51.13:1058,51,0	0/0:24,0:24:66.17:0,66,980	0/0:23,0:23:57.19:0,57,890	0/0:15,0:15:45.15:0,45,704
chr10	10409826	.	GGA	G	1545.55	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.992;DP=609;FS=11.214;HRun=0;HaplotypeScore=114.7133;InbreedingCoeff=0.9982;MQ=77.49;MQ0=0;MQRankSum=1.462;QD=30.30;ReadPosRankSum=1.374;VQSLOD=4.9932;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:96.33:0,96,1669	0/0:10,0:10:24.08:0,24,422	0/0:29,0:29:73.48:0,73,1195	0/0:32,0:32:72.23:0,72,1223	1/1:1,26:27:60.20:824,60,0	0/0:16,0:16:39.13:0,39,674	0/0:19,0:19:51.11:0,51,851	0/0:25,0:25:63.22:0,63,1100	0/0:23,0:23:63.21:0,63,1084	0/0:21,0:21:57.16:0,57,977	0/0:22,0:22:63.22:0,63,1105	0/0:23,0:23:60.14:0,60,1011	0/0:10,0:10:27.08:0,27,430	0/0:17,0:17:48.16:0,48,849	0/0:22,0:22:60.20:0,60,1043	0/0:17,0:17:51.17:0,51,873	0/0:27,0:27:78.27:0,78,1375	0/0:18,0:18:48.16:0,48,850	0/0:14,0:14:36.12:0,36,615	0/0:24,0:24:57.19:0,57,986	0/0:33,0:33:93.32:0,93,1623	0/0:26,0:26:57.19:0,57,952	0/0:14,0:14:33.11:0,33,577	0/0:18,0:18:48.16:0,48,820	1/1:0,24:24:63.17:843,63,0	0/0:28,0:28:75.26:0,75,1314	0/0:18,0:18:48.16:0,48,835	0/0:15,0:15:42.14:0,42,745
chr10	10410587	.	AT	A	1251.34	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.186;DP=560;FS=3.383;HRun=9;HaplotypeScore=63.8128;InbreedingCoeff=0.9915;MQ=73.45;MQ0=0;MQRankSum=-3.818;QD=21.57;ReadPosRankSum=1.913;VQSLOD=4.5645;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:48.12:0,48,535	0/0:13,0:13:36.11:0,36,415	0/0:12,0:12:26.97:0,27,276	0/0:11,0:9:18.05:0,18,204	1/1:2,38:40:99:961,105,0	0/0:26,0:27:69.04:0,69,776	0/0:8,0:8:24.07:0,24,277	0/0:7,0:27:57.09:0,57,302	0/0:24,0:24:66.20:0,66,762	0/0:20,0:20:42.12:0,42,477	0/0:22,0:22:63.19:0,63,726	0/0:16,0:16:34.88:0,35,423	0/0:21,0:21:63.16:0,63,708	0/0:16,0:16:42.12:0,42,483	0/0:18,0:18:54.16:0,54,623	0/0:19,1:20:32.70:0,33,620	0/0:21,0:21:45.13:0,45,517	0/0:16,0:16:41.99:0,42,464	0/0:5,0:15:31.03:0,31,162	0/0:5,0:28:71.80:0,72,400	0/0:2,0:14:34.09:0,34,173	0/0:17,0:17:48.13:0,48,541	0/0:26,0:26:72.16:0,72,800	0/0:9,0:9:21.06:0,21,242	1/1:3,15:18:45.02:412,45,0	0/0:40,0:40:96.29:0,96,1108	0/0:32,0:32:93.28:0,93,1073	0/0:11,0:12:35.93:0,36,385
chr10	10412295	.	C	CT	721.06	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=3.802;DP=453;FS=0.000;HRun=8;HaplotypeScore=55.4749;InbreedingCoeff=0.8196;MQ=71.73;MQ0=0;MQRankSum=0.428;QD=8.90;ReadPosRankSum=-4.286;VQSLOD=0.3533;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,101,887	0/0:7,0:7:15:0,15,137	0/0:19,0:17:1.97:0,2,159	0/0:11,0:9:17.53:0,18,138	1/1:8,0:9:12.51:67,13,0	0/0:24,0:24:59.97:0,60,531	0/0:19,0:19:53.96:0,54,482	1/1:24,0:23:44.33:328,44,0	0/0:22,0:22:59.98:0,60,535	0/0:13,0:13:29.98:0,30,262	0/0:18,0:18:53.97:0,54,475	0/0:12,0:12:35.88:0,36,304	0/0:12,0:12:29.82:0,30,246	0/0:10,0:10:27:0,27,243	0/0:15,0:15:41.91:0,42,369	0/0:15,0:15:39.01:0,39,356	0/0:29,0:29:84.01:0,84,758	0/0:7,0:8:23.05:0,23,198	1/1:9,5:13:20.95:175,21,0	1/1:12,0:12:29.82:223,30,0	0/1:10,0:10:7.72:69,0,8	0/0:10,0:10:12.18:0,12,153	0/0:11,0:11:29.99:0,30,266	0/0:16,0:16:35.99:0,36,325	1/1:11,0:12:5.68:29,6,0	0/0:25,0:25:56.95:0,57,495	0/0:25,0:25:59.70:0,60,582	0/0:11,0:11:32.98:0,33,291
chr10	10412303	.	T	TTG	1442.52	PASS	AB=0.550;AC=11;AF=0.196;AN=56;BaseQRankSum=4.525;DP=474;FS=2.431;HRun=0;HaplotypeScore=67.7741;InbreedingCoeff=0.8596;MQ=69.09;MQ0=0;MQRankSum=0.067;QD=15.68;ReadPosRankSum=-6.279;VQSLOD=2.0378;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,109,1411	0/0:7,0:7:18.02:0,18,237	0/0:19,0:17:40.48:0,40,372	0/0:9,0:7:17.21:0,17,184	1/1:2,0:9:17.79:154,18,0	0/0:23,0:23:65.88:0,66,814	0/0:21,0:22:59.89:0,60,760	1/1:4,24:28:68.21:549,68,0	0/0:23,0:23:69.09:0,69,870	0/0:11,0:11:33.02:0,33,379	0/0:21,0:21:60.02:0,60,735	0/0:12,0:13:38.98:0,39,436	0/0:11,0:11:10.41:0,10,324	0/0:9,0:9:27.07:0,27,370	0/0:15,0:15:42.10:0,42,567	0/0:14,0:14:39.12:0,39,552	0/0:31,0:31:90.17:0,90,1214	0/0:8,0:8:24:0,24,301	1/1:7,3:9:13.57:211,14,0	1/1:1,15:16:33.79:473,34,0	0/1:2,9:11:7.49:183,0,7	0/0:11,0:12:23.29:0,23,302	0/0:13,0:13:33.03:0,33,417	0/0:17,0:17:45.03:0,45,564	1/1:1,0:16:5.88:43,6,0	0/0:25,0:26:72.48:0,72,805	0/0:26,0:26:65.62:0,66,925	0/0:12,0:12:36.02:0,36,454
chr10	10412851	.	G	GT	3981.47	PASS	AC=52;AF=1.000;AN=52;DP=147;FS=0.000;HRun=2;HaplotypeScore=29.7401;InbreedingCoeff=-0.0434;MQ=35.38;MQ0=1;QD=27.08;VQSLOD=2.9790;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,5:5:9.02:97,9,0	1/1:0,3:3:9.02:106,9,0	./.	./.	1/1:0,5:5:12.02:130,12,0	1/1:1,8:9:27.06:301,27,0	1/1:0,5:5:15.04:161,15,0	1/1:5,7:12:21.01:245,21,0	1/1:1,5:6:18.01:189,18,0	1/1:2,8:10:26.90:291,27,0	1/1:0,5:5:12.04:159,12,0	1/1:0,4:4:9.02:91,9,0	1/1:0,5:5:11.94:100,12,0	1/1:0,8:8:18.02:185,18,0	1/1:0,4:4:12:113,12,0	1/1:0,4:4:12.03:129,12,0	1/1:1,1:2:3.01:32,3,0	1/1:1,0:1:3.01:43,3,0	1/1:0,5:5:9.03:118,9,0	1/1:2,4:6:12.02:123,12,0	1/1:1,5:5:12.02:153,12,0	1/1:0,7:6:12.03:124,12,0	1/1:0,9:9:27:274,27,0	1/1:0,1:1:2.98:22,3,0	1/1:0,5:5:15.04:167,15,0	1/1:0,14:14:36.08:428,36,0	1/1:0,3:3:6.02:73,6,0	1/1:3,0:3:9.03:126,9,0
chr10	10412859	.	CA	C	2220.59	PASS	AC=48;AF=1.000;AN=48;DP=130;FS=0.000;HRun=4;HaplotypeScore=32.8077;InbreedingCoeff=-0.0422;MQ=30.76;MQ0=0;QD=17.62;VQSLOD=2.2099;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,5:5:8.99:75,9,0	1/1:1,2:3:5.99:48,6,0	./.	./.	1/1:1,4:5:8.93:65,9,0	1/1:1,7:8:20.94:167,21,0	1/1:0,5:5:14.97:125,15,0	1/1:1,8:9:23.68:215,24,0	1/1:0,5:5:14.78:113,15,0	1/1:1,7:8:20.40:184,20,0	1/1:0,5:5:2.99:23,3,0	1/1:0,4:4:8.96:70,9,0	1/1:0,5:5:11.58:72,12,0	1/1:1,6:7:14.87:108,15,0	1/1:0,4:4:11.87:85,12,0	1/1:0,4:4:11.98:101,12,0	1/1:0,1:1:3:25,3,0	./.	1/1:0,5:5:9.02:96,9,0	1/1:0,4:4:11.95:95,12,0	1/1:3,2:5:2.99:24,3,0	1/1:0,7:6:11.96:95,12,0	1/1:2,7:9:20.63:138,21,0	1/1:0,1:1:2.90:16,3,0	1/1:0,4:4:11.96:95,12,0	1/1:1,10:11:24.04:238,24,0	1/1:1,1:2:2.99:23,3,0	./.
chr10	10414852	.	TTC	T	1020.31	PASS	AB=0.927;AC=36;AF=0.750;AN=48;BaseQRankSum=0.644;DP=411;FS=0.000;HRun=0;HaplotypeScore=54.2517;InbreedingCoeff=0.2004;MQ=67.48;MQ0=16;MQRankSum=0.591;QD=3.74;ReadPosRankSum=0.959;VQSLOD=1.7958;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:4,0:4:2.88:0,3,15	./.	0/0:36,0:27:0:0,0,0	0/0:8,0:8:2.97:0,3,42	1/1:7,1:9:11.07:80,11,0	1/1:9,3:13:5.85:46,6,0	0/0:22,0:21:2.74:0,3,12	1/1:15,4:18:3.01:32,3,0	1/1:20,0:19:2.84:14,3,0	0/1:6,1:7:18.93:26,0,19	1/1:11,2:13:9.02:94,9,0	1/1:20,0:20:2.87:15,3,0	0/1:13,1:14:16.38:69,0,16	1/1:10,5:17:14.70:125,15,0	1/1:8,3:10:10.84:98,11,0	1/1:6,3:10:8.81:77,9,0	1/1:4,2:6:5.81:45,6,0	1/1:16,0:14:2.84:14,3,0	1/1:10,0:13:2.84:14,3,0	./.	1/1:7,0:9:8.86:78,9,0	0/1:7,1:9:23.31:23,0,61	1/1:11,8:18:9.01:96,9,0	./.	0/1:12,0:11:0:0,0,0	1/1:19,5:24:14.87:143,15,0	1/1:10,0:9:5.97:52,6,0
chr10	10414906	.	T	TC	1021.16	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-7.774;DP=537;FS=8.825;HRun=7;HaplotypeScore=71.8404;InbreedingCoeff=0.9313;MQ=65.43;MQ0=13;MQRankSum=2.538;QD=26.87;ReadPosRankSum=0.601;VQSLOD=4.1410;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:51.07:0,51,492	0/0:9,0:9:17.76:0,18,156	0/0:31,0:21:26.73:0,27,382	0/0:30,1:18:41.29:0,41,360	1/1:1,16:17:42.13:506,42,0	0/0:24,0:24:60.09:0,60,579	0/0:11,0:11:23.99:0,24,220	0/0:27,0:27:69.06:0,69,652	0/0:19,0:18:42.07:0,42,405	0/0:34,0:34:93.12:0,93,890	0/0:16,0:16:42.05:0,42,400	0/0:14,1:15:5.83:0,6,340	0/0:15,0:15:39.04:0,39,370	0/0:13,0:13:27.03:0,27,256	0/0:23,0:23:60.09:0,60,575	0/0:18,0:17:50.98:0,51,473	0/0:6,0:6:15.02:0,15,145	0/0:8,0:8:21.02:0,21,196	0/0:17,0:15:33.05:0,33,319	0/0:15,0:15:44.51:0,45,405	0/0:19,0:19:39.06:0,39,377	0/0:16,0:16:45.07:0,45,434	0/0:24,0:24:54:0,54,521	0/0:30,0:29:53.90:0,54,517	1/1:2,19:21:54.13:637,54,0	0/0:19,0:18:54.07:0,54,514	0/0:20,0:19:54.09:0,54,521	0/0:19,0:18:42.05:0,42,403
chr10	10415725	.	GTT	G	1718.81	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=3.333;DP=514;FS=9.774;HRun=12;HaplotypeScore=77.2609;InbreedingCoeff=0.8918;MQ=73.01;MQ0=0;MQRankSum=1.592;QD=20.46;ReadPosRankSum=0.787;VQSLOD=2.3062;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:13:29.54:0,30,377	0/0:4,0:5:8.52:0,9,98	0/0:23,0:19:34.96:0,35,332	0/0:23,0:18:0.53:0,1,148	0/0:4,0:21:40.37:0,40,153	0/0:13,0:16:42.86:0,43,560	0/0:14,0:14:36.10:0,36,499	1/1:10,25:38:70.71:728,71,0	0/0:15,0:15:36.11:0,36,512	0/0:25,0:27:71.68:0,72,948	0/0:15,0:17:42.12:0,42,573	0/0:7,0:9:24.06:0,24,319	0/0:6,0:9:23.05:0,23,286	0/0:13,0:14:33.06:0,33,451	0/0:18,0:18:48.05:0,48,628	0/0:13,0:13:36.12:0,36,517	0/0:25,0:25:67.39:0,67,937	0/0:13,0:14:38.54:0,39,496	0/0:5,0:23:50.48:0,50,255	1/1:7,28:36:83.86:836,84,0	1/1:1,9:10:30.04:297,30,0	0/0:13,0:14:30.09:0,30,420	0/0:19,0:19:33.95:0,34,451	0/0:8,0:8:21.02:0,21,270	0/0:1,0:9:17.47:0,17,61	0/0:25,0:26:73.07:0,73,999	0/0:24,0:28:65.67:0,66,875	0/0:24,0:24:63.21:0,63,928
chr10	10419451	.	CGTGT	C	2366.93	PASS	AB=0.738;AC=37;AF=0.661;AN=56;BaseQRankSum=0.515;DP=487;FS=0.723;HRun=0;HaplotypeScore=85.7383;InbreedingCoeff=0.4834;MQ=67.52;MQ0=6;MQRankSum=1.806;QD=9.14;ReadPosRankSum=2.769;VQSLOD=2.5123;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:24,5:29:12.03:169,12,0	1/1:3,2:5:6.02:94,6,0	0/0:30,0:21:3.01:0,3,43	0/0:29,0:18:3.01:0,3,41	0/0:37,0:36:9.03:0,9,174	0/1:12,1:19:29.01:29,0,54	0/1:8,2:14:71.07:71,0,110	0/0:21,0:21:19.76:0,20,191	0/1:9,0:12:25.45:36,0,25	1/1:7,1:10:8.56:102,9,0	1/1:12,7:20:8.48:250,8,0	1/1:5,2:7:3.01:47,3,0	1/1:2,0:2:3.01:47,3,0	1/1:10,0:13:6:56,6,0	1/1:5,3:10:15.04:197,15,0	1/1:9,2:12:6.02:94,6,0	1/1:15,10:26:24.08:375,24,0	1/1:0,3:3:9.03:141,9,0	0/0:16,0:15:12:0,12,158	0/0:42,0:42:24.08:0,24,518	0/0:28,0:26:27.09:0,27,574	1/1:9,1:10:5.93:64,6,0	1/1:8,1:11:6.01:75,6,0	1/1:8,7:15:15.52:235,16,0	0/0:25,0:25:2.79:0,3,25	1/1:16,3:19:6.02:94,6,0	1/1:9,6:15:15.05:234,15,0	1/1:3,3:6:9.03:141,9,0
chr10	10419478	.	G	GCA	280.21	PASS	AB=0.868;AC=2;AF=0.036;AN=56;BaseQRankSum=6.675;DP=585;FS=21.601;HRun=0;HaplotypeScore=109.6034;InbreedingCoeff=-0.0392;MQ=48.77;MQ0=22;MQRankSum=-6.178;QD=5.60;ReadPosRankSum=-2.554;VQSLOD=0.7338;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:75.61:0,76,1011	0/0:5,0:5:15.01:0,15,183	0/0:38,0:17:42.71:0,43,678	0/0:35,0:16:42.14:0,42,642	0/0:44,1:44:57.41:0,57,844	0/0:21,0:21:49.88:0,50,614	0/0:17,0:16:45.04:0,45,545	0/1:18,10:28:99:287,0,630	0/0:12,0:12:33.07:0,33,420	0/0:19,0:19:51.11:0,51,649	0/0:18,0:18:38.96:0,39,414	0/0:9,0:9:18.34:0,18,249	0/0:8,0:8:18.04:0,18,236	0/0:12,0:12:26.98:0,27,363	0/0:10,0:10:29.97:0,30,338	0/0:14,0:14:36.02:0,36,438	0/0:29,0:29:52.45:0,52,675	0/0:6,0:6:18:0,18,198	0/1:22,0:20:82.40:82,0,433	0/0:43,1:44:32.42:0,32,735	0/0:29,0:27:27.03:0,27,653	0/0:16,0:16:41.46:0,41,595	0/0:18,0:18:45.10:0,45,629	0/0:19,0:19:36.01:0,36,434	0/0:32,2:34:38.79:0,39,589	0/0:20,0:20:57.15:0,57,838	0/0:20,0:20:54.08:0,54,703	0/0:5,0:5:14.99:0,15,159
chr10	10419829	.	C	CA	1243.35	PASS	AB=0.938;AC=19;AF=0.339;AN=56;BaseQRankSum=1.263;DP=460;FS=1.674;HRun=13;HaplotypeScore=67.6595;InbreedingCoeff=0.4438;MQ=69.51;MQ0=13;MQRankSum=-2.565;QD=4.47;ReadPosRankSum=-3.028;VQSLOD=0.8625;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,1:28:9.66:0,10,285	0/0:7,0:7:14.88:0,15,103	0/1:50,0:22:41.60:42,0,80	0/1:29,1:17:2.56:3,0,28	1/1:8,3:18:22.85:137,23,0	0/0:13,0:13:24.21:0,24,165	0/1:13,0:13:0.13:0,0,102	1/1:14,12:27:23.97:313,24,0	0/0:9,0:10:16.79:0,17,105	0/1:14,1:15:1.09:1,0,138	0/0:11,0:14:25.83:0,26,188	0/0:15,0:15:23.64:0,24,164	0/0:9,0:9:10.95:0,11,77	0/0:11,0:11:17.47:0,17,113	0/0:10,0:10:20.80:0,21,143	0/0:12,0:12:29.62:0,30,200	0/0:13,0:13:20.71:0,21,141	0/0:12,0:12:24.96:0,25,182	1/1:11,9:21:0.49:236,0,0	1/1:7,9:16:3.92:161,4,0	1/1:4,12:16:27.03:250,27,0	0/0:9,0:9:14.86:0,15,103	0/0:9,0:9:14.86:0,15,103	0/1:9,1:10:4.02:4,0,120	1/1:9,2:16:32.54:205,33,0	0/1:14,3:17:25.53:26,0,102	0/1:21,3:27:39.65:40,0,180	0/0:10,0:10:11.77:0,12,80
chr10	10428268	.	TA	T	12151.18	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-2.853;DP=574;FS=0.876;HRun=9;HaplotypeScore=88.9464;InbreedingCoeff=0.9940;MQ=77.71;MQ0=0;MQRankSum=-5.551;QD=22.71;ReadPosRankSum=2.835;VQSLOD=5.4481;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,28:31:37.42:597,37,0	1/1:0,10:10:26.86:247,27,0	0/0:17,0:15:18.04:0,18,187	0/0:22,0:18:32.72:0,33,327	1/1:2,16:18:45.01:412,45,0	1/1:0,24:24:69.04:632,69,0	1/1:1,13:14:39.01:357,39,0	1/1:9,21:30:63:567,63,0	1/1:0,15:15:33.02:302,33,0	1/1:1,20:21:60.01:543,60,0	1/1:4,10:14:27:247,27,0	1/1:0,16:16:48.03:439,48,0	1/1:1,23:24:57.03:522,57,0	1/1:4,15:19:42.02:384,42,0	1/1:3,13:16:36.01:329,36,0	1/1:1,22:23:60.03:549,60,0	1/1:2,20:22:57.03:522,57,0	1/1:2,14:16:36.02:329,36,0	1/1:1,15:16:45.02:412,45,0	1/1:6,22:28:34.33:559,34,0	1/1:3,24:27:69.03:631,69,0	1/1:3,17:20:51.02:467,51,0	1/1:1,20:21:57.01:522,57,0	1/1:3,14:17:42.02:384,42,0	1/1:2,22:24:57.03:522,57,0	1/1:2,30:32:87.04:796,87,0	1/1:3,21:24:60.03:549,60,0	1/1:1,12:13:36.01:329,36,0
chr10	10429511	.	GT	G	5518.70	PASS	AB=0.723;AC=33;AF=0.589;AN=56;BaseQRankSum=10.606;DP=609;FS=1.559;HRun=12;HaplotypeScore=75.9836;InbreedingCoeff=0.6571;MQ=67.30;MQ0=0;MQRankSum=-2.364;QD=14.33;ReadPosRankSum=7.316;VQSLOD=5.1697;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,22:26:29.42:329,29,0	0/1:2,6:8:12.51:98,0,13	0/0:20,0:13:8.42:0,8,90	0/1:16,1:11:8.63:57,0,9	0/0:31,1:31:45.83:0,46,618	0/0:21,2:23:30.84:0,31,475	0/0:17,1:18:22.72:0,23,393	0/0:35,2:37:54.69:0,55,706	0/0:19,0:20:35.16:0,35,363	1/1:8,18:26:53.70:412,54,0	1/1:3,14:18:13.43:277,13,0	1/1:8,19:27:26.23:387,26,0	1/1:4,13:17:38.81:302,39,0	1/1:4,17:21:50.74:394,51,0	1/1:2,19:21:53.77:418,54,0	1/1:4,16:22:48.17:359,48,0	1/1:3,15:18:41.82:325,42,0	1/1:3,11:14:9.31:188,9,0	0/1:17,2:19:3.93:4,0,318	0/0:31,1:36:69.54:0,70,822	0/0:16,0:16:13.37:0,13,305	0/1:9,18:28:5.11:321,0,5	1/1:4,11:15:20.87:162,21,0	1/1:6,19:25:53.60:409,54,0	0/0:21,0:22:62.96:0,63,621	0/1:6,12:18:69.77:189,0,70	1/1:1,30:31:80.66:627,81,0	1/1:1,12:14:34.89:261,35,0
chr10	10429844	.	A	ACAC	2530.71	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=-5.400;DP=647;FS=2.522;HRun=0;HaplotypeScore=158.5753;InbreedingCoeff=0.6544;MQ=64.37;MQ0=7;MQRankSum=-1.108;QD=18.61;ReadPosRankSum=-2.899;VQSLOD=3.3022;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,107,1519	0/0:9,0:9:27.08:0,27,389	0/1:21,0:13:3.75:4,0,288	0/0:15,0:8:17.42:0,17,241	0/0:22,0:22:63.20:0,63,1103	1/1:10,13:23:22.20:763,22,0	1/1:16,9:24:58:901,58,0	0/0:34,0:34:15.30:0,15,302	1/1:10,14:23:58.10:995,58,0	0/0:20,0:20:49.91:0,50,696	0/0:26,0:26:59.40:0,59,909	0/0:15,0:15:36.12:0,36,590	0/0:20,0:20:42.14:0,42,671	0/0:19,0:19:42.13:0,42,630	0/0:26,0:26:63.20:0,63,1005	0/0:20,0:19:41.99:0,42,672	0/0:35,0:35:81.17:0,81,1187	0/0:16,0:16:26.21:0,26,501	0/1:21,0:20:15.79:16,0,157	0/0:35,0:35:7.23:0,7,485	0/1:22,0:22:1.56:2,0,259	0/0:31,0:31:72.17:0,72,1156	0/0:19,0:19:41.13:0,41,582	0/0:23,0:23:34.16:0,34,757	0/0:20,0:20:60.20:0,60,1036	0/0:23,0:22:58.79:0,59,888	0/0:30,0:31:71.80:0,72,1098	0/0:7,0:9:27.05:0,27,388
chr10	10429845	.	AAT	A	13003.02	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=3.732;DP=641;FS=7.306;HRun=0;HaplotypeScore=109.3253;InbreedingCoeff=0.9822;MQ=64.37;MQ0=7;MQRankSum=-0.897;QD=23.10;ReadPosRankSum=2.262;VQSLOD=5.4697;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,34:42:87.23:1119,87,0	1/1:0,9:9:24.08:309,24,0	0/0:21,0:13:11.29:0,11,185	0/0:15,0:8:18:0,18,234	0/0:22,0:22:59.93:0,60,935	1/1:22,0:22:58.16:541,58,0	1/1:21,4:24:48.01:479,48,0	1/1:32,3:35:67.83:592,68,0	1/1:22,2:23:58.48:494,58,0	1/1:3,17:20:48.14:603,48,0	1/1:2,24:26:71.93:792,72,0	1/1:0,15:15:36.12:463,36,0	1/1:2,18:20:36.08:463,36,0	1/1:3,16:19:36.12:463,36,0	1/1:5,20:25:48.16:618,48,0	1/1:2,17:18:33.11:425,33,0	1/1:4,31:35:69.20:888,69,0	1/1:1,15:16:33.07:397,33,0	1/1:19,2:20:19.94:270,20,0	1/1:35,0:35:23.30:109,23,0	1/1:21,0:21:31.29:203,31,0	1/1:3,27:30:71.61:870,72,0	1/1:1,17:18:39:480,39,0	1/1:1,22:23:51.17:656,51,0	0/0:20,0:20:54.18:0,54,901	1/1:3,20:22:57.17:714,57,0	1/1:5,26:31:68.98:831,69,0	1/1:5,4:9:18.06:226,18,0
chr10	10431512	.	C	CA	13308.68	PASS	AB=1.000;AC=41;AF=0.732;AN=56;BaseQRankSum=-13.079;DP=620;FS=1.117;HRun=6;HaplotypeScore=54.6757;InbreedingCoeff=0.9299;MQ=63.14;MQ0=6;MQRankSum=2.351;QD=30.04;ReadPosRankSum=3.359;VQSLOD=5.4215;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,34:39:87.28:1094,87,0	1/1:0,8:8:24.08:302,24,0	0/1:17,0:10:4.70:5,0,182	0/0:18,0:10:19.71:0,20,210	0/0:43,0:43:99:0,102,1034	1/1:3,25:28:66.21:830,66,0	1/1:0,14:14:39.12:491,39,0	0/0:32,0:32:87.18:0,87,882	1/1:3,14:17:36.12:453,36,0	1/1:4,25:29:78.24:962,78,0	1/1:0,22:22:60.11:719,60,0	1/1:4,13:17:36.12:453,36,0	1/1:2,14:15:39.12:491,39,0	1/1:5,7:11:21.07:258,21,0	1/1:3,14:17:36.12:453,36,0	1/1:2,14:16:42.13:528,42,0	1/1:0,26:26:69.22:868,69,0	1/1:4,23:27:39.46:798,39,0	0/0:24,0:22:66.15:0,66,673	0/0:34,0:34:93.19:0,93,942	0/0:19,0:19:54.12:0,54,550	1/1:5,21:26:63.20:793,63,0	1/1:1,19:20:57.18:717,57,0	1/1:0,21:21:60.19:755,60,0	0/0:7,0:7:21.05:0,21,213	1/1:5,23:28:69.22:868,69,0	1/1:1,17:18:51.16:642,51,0	1/1:3,22:25:66.21:830,66,0
chr10	10436790	.	G	GGGGAAAA	30269.98	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=8.024;DP=388;FS=0.000;HRun=0;HaplotypeScore=110.9946;InbreedingCoeff=0.9231;MQ=69.80;MQ0=0;MQRankSum=-13.810;QD=105.47;ReadPosRankSum=5.246;VQSLOD=6.5010;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,8:9:24.08:958,24,0	1/1:0,6:6:18.06:726,18,0	0/0:34,0:31:80.40:0,80,1848	0/0:16,0:15:45.15:0,45,1140	0/0:25,0:25:75.23:0,75,2032	1/1:0,20:20:60.21:2409,60,0	1/1:1,11:16:33.58:1326,34,0	1/1:1,12:15:43.02:1437,43,0	1/1:0,12:15:36.12:1441,36,0	1/1:1,13:14:42.10:1516,42,0	1/1:0,15:15:42.14:1654,42,0	1/1:0,11:12:33.11:1325,33,0	1/1:0,12:13:36.12:1431,36,0	1/1:0,7:8:21.07:842,21,0	1/1:0,13:16:39.13:1566,39,0	1/1:0,6:7:17.81:724,18,0	1/1:0,2:2:6.02:240,6,0	1/1:0,4:4:12.04:480,12,0	1/1:0,3:4:9.03:357,9,0	1/1:2,15:17:51.17:1877,51,0	1/1:0,3:5:9.03:359,9,0	1/1:0,9:10:30.10:1181,30,0	1/1:0,21:22:60.21:2409,60,0	1/1:0,6:6:18.06:726,18,0	0/0:26,0:26:75.23:0,75,1974	1/1:0,18:19:57.20:2179,57,0	1/1:1,20:22:60.68:2385,61,0	1/1:0,6:6:18.06:724,18,0
chr10	10437848	.	TAC	T	6590.22	PASS	AB=0.734;AC=46;AF=0.852;AN=54;BaseQRankSum=6.573;DP=672;FS=8.361;HRun=0;HaplotypeScore=84.7064;InbreedingCoeff=0.0079;MQ=59.25;MQ0=27;MQRankSum=0.249;QD=10.87;ReadPosRankSum=2.952;VQSLOD=3.8780;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:14,22:37:0.57:405,0,1	1/1:3,5:8:6.02:67,6,0	0/0:27,0:3:3:0,3,25	./.	0/1:24,7:32:99:110,0,529	0/1:6,9:14:5.09:130,0,5	1/1:16,8:27:17.62:160,18,0	0/1:25,1:28:2.34:94,0,2	1/1:9,10:19:5.97:258,6,0	1/1:5,14:21:44.74:448,45,0	1/1:8,9:17:24.07:268,24,0	1/1:4,11:16:23.90:249,24,0	1/1:9,13:23:13.29:246,13,0	1/1:8,11:18:18.05:201,18,0	1/1:9,12:23:32.76:330,33,0	1/1:7,12:21:35.77:363,36,0	1/1:10,17:27:20.15:407,20,0	1/1:9,5:14:1.14:170,1,0	1/1:7,0:10:8.52:42,9,0	1/1:7,6:13:11.82:113,12,0	1/1:28,18:47:0.06:191,0,0	1/1:14,12:26:17.12:259,17,0	1/1:11,14:27:41.78:427,42,0	1/1:11,19:33:28.65:392,29,0	1/1:12,18:34:50.14:469,50,0	0/1:14,2:17:21.83:152,0,22	1/1:8,16:28:10.66:459,11,0	0/1:9,8:16:24.45:180,0,24
chr10	10440590	.	C	CGTGTGTGTGTGTGTGT	12468.52	PASS	AB=1.000;AC=45;AF=0.804;AN=56;BaseQRankSum=-1.614;DP=516;FS=1.541;HRun=0;HaplotypeScore=215.6570;InbreedingCoeff=0.6445;MQ=59.09;MQ0=8;MQRankSum=-5.024;QD=30.41;ReadPosRankSum=-0.118;VQSLOD=3.7500;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:24:12.33:211,12,0	0/1:7,0:7:0:0,0,0	0/0:36,0:24:19.87:0,20,459	0/0:29,0:20:21.07:0,21,476	0/0:14,0:17:36.12:0,36,1427	1/1:17,0:16:2.74:198,3,0	1/1:33,0:32:23.01:675,23,0	1/1:27,0:23:18.06:368,18,0	1/1:11,0:16:9.03:543,9,0	1/1:24,0:24:27.09:1311,27,0	1/1:16,0:16:2.45:74,2,0	1/1:21,3:25:11.98:850,12,0	1/1:12,1:16:11.98:653,12,0	1/1:13,8:22:12.24:852,12,0	1/1:10,2:12:6.02:387,6,0	1/1:13,4:16:15.05:1127,15,0	1/1:12,1:18:12.04:664,12,0	1/1:9,1:10:18.06:1075,18,0	1/1:14,0:13:21.07:698,21,0	1/1:17,0:17:5.28:140,5,0	1/1:18,0:17:2.52:50,3,0	0/0:7,1:8:0.94:0,1,2	1/1:9,1:9:2.96:227,3,0	1/1:19,3:24:17.57:1000,18,0	0/0:14,0:16:36.12:0,36,1287	1/1:20,0:20:24.08:1016,24,0	1/1:11,0:11:3.01:162,3,0	1/1:6,0:6:6.02:187,6,0
chr10	10441145	.	CGGATACGTCT	C	34910.11	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=16.699;DP=642;FS=0.000;HRun=0;HaplotypeScore=222.6936;InbreedingCoeff=0.9951;MQ=84.40;MQ0=0;MQRankSum=-19.171;QD=82.53;ReadPosRankSum=9.340;VQSLOD=4.1037;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,26:26:36.12:1257,36,0	1/1:0,10:10:27.09:901,27,0	0/0:30,0:30:87.30:0,87,4160	0/0:26,0:26:68.87:0,69,2849	0/0:35,0:35:99:0,105,5136	1/1:0,25:25:69.24:2409,69,0	1/1:0,22:22:45.15:1569,45,0	0/0:35,0:35:99:0,105,5424	1/1:0,26:26:69.24:2408,69,0	1/1:1,21:22:66.23:2216,66,0	1/1:0,22:22:48.16:1675,48,0	1/1:0,17:17:45.15:1554,45,0	1/1:0,26:26:65.84:2304,66,0	1/1:0,21:21:54.19:1882,54,0	1/1:0,35:35:72.25:2511,72,0	1/1:0,24:24:54.19:1884,54,0	1/1:0,25:25:57.20:1988,57,0	1/1:0,7:7:18.06:629,18,0	0/0:27,0:27:72.25:0,72,3745	0/0:13,0:13:39.13:0,39,2084	0/0:32,0:32:93.32:0,93,4841	1/1:0,12:12:24.08:838,24,0	1/1:0,26:26:60.21:2094,60,0	1/1:0,18:18:24.08:835,24,0	0/0:21,0:21:63.22:0,63,3287	1/1:0,29:29:87.30:2919,87,0	1/1:0,25:25:72.17:2514,72,0	1/1:0,5:5:15.05:524,15,0
chr10	10441968	.	A	AT	1463.55	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=-3.612;DP=583;FS=0.554;HRun=8;HaplotypeScore=56.6818;InbreedingCoeff=0.9209;MQ=64.84;MQ0=2;MQRankSum=-0.962;QD=16.63;ReadPosRankSum=-2.749;VQSLOD=2.9998;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:56:99:0,159,1448	0/0:13,0:13:33.01:0,33,302	0/1:12,0:10:1.10:1,0,118	0/0:17,0:10:23.97:0,24,210	0/0:28,0:28:71.99:0,72,647	0/0:11,0:11:33.02:0,33,302	0/0:19,0:19:48.03:0,48,439	1/1:11,12:23:33.10:380,33,0	0/0:21,0:21:60.02:0,60,545	0/0:24,0:24:63.02:0,63,573	0/0:15,0:15:39.01:0,39,356	0/0:12,0:12:36:0,36,324	0/0:17,0:17:44.96:0,45,403	0/0:17,0:17:47.99:0,48,430	0/0:21,0:21:41.97:0,42,375	0/0:18,0:18:48.02:0,48,439	0/0:46,0:46:99:0,123,1119	0/0:17,0:17:41.99:0,42,379	1/1:6,7:14:23.90:257,24,0	1/1:1,15:16:42.06:468,42,0	1/1:5,18:23:45.13:517,45,0	0/0:22,0:22:63:0,63,569	0/0:16,0:16:38.97:0,39,349	0/0:26,0:26:78.02:0,78,708	0/0:22,0:22:41.99:0,42,380	0/0:22,0:23:62.03:0,62,543	0/0:20,0:20:47.99:0,48,429	0/0:14,0:14:36.01:0,36,329
chr10	10442381	.	A	AG	2878.96	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=12.154;DP=525;FS=3.747;HRun=1;HaplotypeScore=59.4082;InbreedingCoeff=0.9991;MQ=82.31;MQ0=0;MQRankSum=-2.320;QD=39.99;ReadPosRankSum=-3.455;VQSLOD=2.8427;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,114,1479	0/0:10,0:10:30.10:0,30,389	0/0:17,0:17:48.15:0,48,618	0/0:17,0:17:45.14:0,45,575	0/0:12,0:12:36.12:0,36,467	0/0:24,0:24:69.22:0,69,895	0/0:15,0:15:42.12:0,42,531	1/1:2,23:25:72.24:1069,72,0	0/0:20,0:20:60.19:0,60,777	0/0:19,0:19:54.18:0,54,701	0/0:14,0:14:39.13:0,39,506	0/0:24,0:24:72.23:0,72,933	0/0:22,0:22:66.19:0,66,827	0/0:22,0:22:66.21:0,66,857	0/0:23,0:23:69.22:0,69,896	0/0:10,0:10:27.09:0,27,350	0/0:19,0:19:57.19:0,57,740	0/0:16,0:16:45.15:0,45,582	1/1:2,13:15:42.14:622,42,0	1/1:1,10:11:27.09:405,27,0	1/1:0,21:21:63.21:944,63,0	0/0:13,0:13:36.10:0,36,453	0/0:17,0:17:51.17:0,51,662	0/0:22,0:22:66.21:0,66,857	0/0:11,0:11:33.11:0,33,428	0/0:21,0:21:63.20:0,63,806	0/0:26,0:25:78.25:0,78,1010	0/0:20,0:20:60.20:0,60,779
chr10	10442600	.	CATATATATATATATATATAT	C	3322.43	PASS	AC=22;AF=0.846;AN=26;BaseQRankSum=2.254;DP=214;FS=0.000;HRun=0;HaplotypeScore=116.1575;InbreedingCoeff=0.2562;MQ=69.25;MQ0=3;MQRankSum=-0.150;QD=28.40;ReadPosRankSum=2.254;VQSLOD=2.1627;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:18,2:20:3.01:159,3,0	1/1:4,2:6:3.01:159,3,0	./.	./.	./.	1/1:8,5:13:9.03:444,9,0	./.	0/0:12,0:10:5.38:0,5,52	1/1:3,1:4:3.01:159,3,0	1/1:2,4:6:12.04:637,12,0	0/0:6,1:7:0:0,0,0	./.	./.	1/1:3,2:5:3.01:159,3,0	1/1:11,0:11:3.01:97,3,0	./.	./.	1/1:9,7:16:3.01:159,3,0	./.	./.	./.	./.	./.	./.	./.	1/1:4,8:12:18.06:787,18,0	1/1:14,2:16:9.03:403,9,0	1/1:6,2:8:3.01:159,3,0
chr10	10442678	.	C	CAT	479.25	PASS	AB=0.750;AC=8;AF=0.143;AN=56;BaseQRankSum=-1.789;DP=387;FS=7.637;HRun=0;HaplotypeScore=114.1673;InbreedingCoeff=0.6997;MQ=54.01;MQ0=6;MQRankSum=-1.723;QD=10.42;ReadPosRankSum=-3.992;VQSLOD=1.9532;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:18:17.80:0,18,336	0/0:6,0:6:15.05:0,15,195	0/0:34,0:14:34.11:0,34,383	0/0:39,0:14:8.55:0,9,136	0/0:11,0:11:27.09:0,27,351	0/1:19,0:19:3.45:3,0,269	0/0:9,0:9:18.06:0,18,234	1/1:1,9:11:27.08:411,27,0	0/0:17,0:17:11.37:0,11,239	0/0:20,0:20:56.91:0,57,632	0/0:6,0:6:0:0,0,0	0/0:13,0:13:27.09:0,27,351	0/0:13,0:13:33.11:0,33,429	0/0:14,0:14:36.12:0,36,468	0/0:15,0:15:33.11:0,33,429	0/0:9,0:9:27.05:0,27,332	0/0:11,0:10:15.05:0,15,195	0/0:12,0:11:27.09:0,27,343	1/1:3,2:5:11.70:142,12,0	1/1:0,6:6:3.01:51,3,0	0/1:0,5:4:0:0,0,0	0/0:11,0:11:21.07:0,21,273	0/0:10,0:10:27.09:0,27,351	0/0:5,0:5:9.03:0,9,116	0/0:6,0:6:15.05:0,15,195	0/0:26,0:25:66.08:0,66,814	0/0:16,0:16:36.12:0,36,468	0/0:18,0:18:30.10:0,30,390
chr10	10442702	.	C	CACATACAT	3855.05	PASS	AB=0.688;AC=27;AF=0.500;AN=54;BaseQRankSum=6.068;DP=455;FS=8.276;HRun=0;HaplotypeScore=139.4357;InbreedingCoeff=0.6029;MQ=55.50;MQ0=11;MQRankSum=1.035;QD=14.77;ReadPosRankSum=-0.250;VQSLOD=2.1438;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:7,1:25:30.40:245,30,0	1/1:2,0:6:11.97:98,12,0	0/0:38,0:16:2.84:0,3,14	0/0:39,0:12:11.99:0,12,163	1/1:2,0:14:26.94:220,27,0	1/1:5,7:19:21:460,21,0	1/1:10,0:10:9.02:209,9,0	0/0:9,0:9:2.80:0,3,13	1/1:9,11:23:9.31:484,9,0	1/1:9,0:23:41.95:378,42,0	0/0:3,9:15:0:0,0,0	0/0:13,0:14:24.08:0,24,566	0/0:11,0:13:33.11:0,33,759	0/0:16,0:16:33.09:0,33,713	1/1:6,0:20:38.91:318,39,0	1/1:3,1:10:20.99:289,21,0	1/1:5,0:17:23.94:196,24,0	0/1:10,0:12:99:142,0,102	0/0:6,0:6:6.02:0,6,87	./.	0/0:7,0:7:0:0,0,0	0/1:4,0:14:51.03:147,0,51	0/0:9,0:9:21.06:0,21,475	0/0:5,0:5:2.92:0,3,41	0/0:10,0:10:27.09:0,27,638	1/1:14,0:22:38.95:381,39,0	0/1:10,0:25:99:166,0,120	1/1:8,0:18:14.97:122,15,0
chr10	10442716	.	CAT	C	116.76	PASS	AB=0.861;AC=6;AF=0.107;AN=56;BaseQRankSum=2.786;DP=480;FS=8.862;HRun=0;HaplotypeScore=112.7952;InbreedingCoeff=0.3920;MQ=55.54;MQ0=9;MQRankSum=-0.763;QD=2.99;ReadPosRankSum=-0.667;VQSLOD=1.8584;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:65.85:0,66,839	0/0:9,0:9:27.09:0,27,399	0/0:28,0:13:39.02:0,39,522	0/0:34,0:13:11.54:0,12,427	0/0:17,0:17:44.01:0,44,582	0/0:17,0:17:35.32:0,35,416	0/0:11,0:11:18.05:0,18,255	0/1:4,1:5:30.46:30,0,120	0/0:22,0:22:33.06:0,33,400	0/0:20,0:20:55.73:0,56,793	0/0:14,0:14:2.74:0,3,12	0/0:17,0:17:39.43:0,39,698	0/0:15,0:15:33.73:0,34,714	0/0:15,0:15:45.15:0,45,808	0/0:19,0:19:54.18:0,54,748	0/0:12,0:12:36.12:0,36,499	0/0:21,0:21:41.97:0,42,626	0/0:12,0:12:31.87:0,32,506	0/1:7,1:7:49.83:120,0,50	1/1:7,7:14:6.02:71,6,0	1/1:12,0:11:0.47:1,0,0	0/0:15,0:15:39.22:0,39,506	0/0:10,0:10:30.10:0,30,533	0/0:11,0:11:27.09:0,27,461	0/0:15,0:15:42.14:0,42,733	0/0:25,0:24:72.23:0,72,1012	0/0:28,0:28:60.20:0,60,912	0/0:22,0:22:45.15:0,45,619
chr10	10442718	.	T	TGC	319.86	PASS	AB=0.944;AC=10;AF=0.179;AN=56;BaseQRankSum=3.378;DP=478;FS=7.332;HRun=0;HaplotypeScore=112.1427;InbreedingCoeff=0.3349;MQ=55.82;MQ0=9;MQRankSum=-4.199;QD=3.37;ReadPosRankSum=-5.420;VQSLOD=-0.3135;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:50.34:0,50,600	0/0:9,0:9:26.03:0,26,291	0/0:28,0:14:39.13:0,39,596	0/0:31,0:12:17.65:0,18,443	0/0:17,0:17:39.49:0,39,347	0/1:17,0:17:4.62:5,0,164	0/0:10,0:10:17.58:0,18,198	0/1:8,0:8:97.61:162,0,98	0/1:22,0:22:17.81:18,0,185	0/0:19,0:19:52.95:0,53,435	1/1:14,0:14:2.47:12,2,0	0/0:16,0:16:45.13:0,45,703	0/0:16,0:16:45.10:0,45,681	0/0:16,0:16:48.14:0,48,732	0/0:19,0:19:50.66:0,51,398	0/0:12,0:12:32.15:0,32,309	0/0:21,0:21:39.82:0,40,385	0/0:12,0:12:19.75:0,20,367	0/1:5,2:6:33.71:127,0,34	1/1:12,1:13:6.02:121,6,0	1/1:8,5:13:0.30:1,0,0	0/0:15,0:15:31.10:0,31,277	0/0:10,0:10:30.10:0,30,485	0/0:12,0:12:30.06:0,30,460	0/0:15,0:15:42.14:0,42,684	0/0:24,0:23:69.03:0,69,738	0/0:29,0:29:60.86:0,61,699	0/0:20,0:20:43.69:0,44,545
chr10	10443294	.	CAAGGACGTAGA	C	5479.90	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=12.274;DP=736;FS=2.373;HRun=0;HaplotypeScore=236.7858;InbreedingCoeff=0.9973;MQ=75.53;MQ0=0;MQRankSum=-9.744;QD=64.47;ReadPosRankSum=-1.748;VQSLOD=3.8884;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,126,7066	0/0:9,0:9:27.09:0,27,1439	0/0:32,0:31:84.29:0,84,3861	0/0:27,0:27:66.05:0,66,2916	0/0:23,0:23:60.21:0,60,3085	0/0:19,0:19:57.18:0,57,3030	0/0:19,0:19:54.19:0,54,2879	1/1:9,18:27:54.16:1685,54,0	0/0:25,0:25:66.21:0,66,3547	0/0:23,0:23:63.22:0,63,3467	0/0:18,0:18:51.16:0,51,2640	0/0:36,0:36:99:0,99,5449	0/0:27,0:27:75.23:0,75,3967	0/0:28,0:28:78.27:0,78,4456	0/0:33,0:33:96.33:0,96,5390	0/0:29,0:29:84.28:0,84,4407	0/0:39,0:39:99:0,108,5808	0/0:22,0:22:63.22:0,63,3442	1/1:8,13:21:39.02:1057,39,0	1/1:2,22:24:60.20:2104,60,0	1/1:5,8:12:18.06:635,18,0	0/0:26,0:26:75.24:0,75,3750	0/0:32,0:32:96.29:0,96,4648	0/0:39,0:39:99:0,117,6181	0/0:25,0:25:72.20:0,72,3468	0/0:30,0:30:90.30:0,90,4846	0/0:35,0:35:99:0,102,4795	0/0:11,0:11:30.10:0,30,1718
chr10	10443665	.	G	GC	5120.24	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-12.081;DP=668;FS=2.155;HRun=1;HaplotypeScore=64.4158;InbreedingCoeff=0.9994;MQ=77.61;MQ0=0;MQRankSum=-1.659;QD=40.00;ReadPosRankSum=-2.486;VQSLOD=4.5114;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:25:75.20:0,75,937	0/0:10,0:10:30.10:0,30,389	0/0:18,0:18:51.15:0,51,624	0/0:15,0:15:32.40:0,32,366	0/0:32,0:32:93.27:0,93,1173	0/0:35,0:35:99:0,102,1323	0/0:26,0:26:75.23:0,75,960	1/1:4,34:38:99:1464,102,0	0/0:21,0:21:57.18:0,57,740	0/0:29,0:29:84.27:0,84,1080	0/0:21,0:21:63.13:0,63,777	0/0:22,0:22:66.20:0,66,842	0/0:28,0:28:84.27:0,84,1085	0/0:23,0:23:63.17:0,63,786	0/0:38,0:38:99:0,114,1466	0/0:19,0:19:57.19:0,57,740	0/0:13,0:13:36.10:0,36,452	0/0:19,0:19:51.15:0,51,646	1/1:0,21:21:63.21:944,63,0	1/1:0,28:28:72.24:1077,72,0	1/1:3,38:41:99:1636,111,0	0/0:32,0:32:90.29:0,90,1167	0/0:23,0:23:69.17:0,69,846	0/0:11,0:11:33.11:0,33,428	0/0:16,0:16:48.16:0,48,623	0/0:24,0:24:72.22:0,72,922	0/0:30,0:29:90.29:0,90,1166	0/0:9,0:9:27.09:0,27,350
chr10	10444074	.	AAGAT	A	721.21	PASS	AB=1.000;AC=8;AF=0.167;AN=48;BaseQRankSum=-4.992;DP=776;FS=4.325;HRun=0;HaplotypeScore=241.2052;InbreedingCoeff=0.4941;MQ=58.41;MQ0=1;MQRankSum=3.611;QD=5.23;ReadPosRankSum=-0.469;VQSLOD=2.5291;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:6:0,6,72	./.	./.	./.	1/1:8,23:31:50.99:661,51,0	0/0:18,0:18:14.99:0,15,154	0/0:25,0:25:24.02:0,24,337	1/1:41,0:41:2.92:17,3,0	0/0:19,0:19:15.02:0,15,219	0/0:33,0:33:51.96:0,52,720	0/0:37,0:37:5.99:0,6,49	0/0:40,0:40:21.47:0,21,219	0/0:30,0:30:6.01:0,6,74	0/0:42,0:42:12.02:0,12,142	0/0:46,0:46:14.94:0,15,162	0/0:22,0:22:8.97:0,9,99	./.	0/0:23,0:23:18.98:0,19,227	0/0:24,0:24:9:0,9,82	0/1:29,0:29:21.89:22,0,175	0/1:20,0:20:15.95:16,0,44	0/0:24,0:24:8.94:0,9,113	0/0:35,0:35:21.04:0,21,259	0/0:26,0:26:14.82:0,15,169	1/1:11,6:17:9.03:138,9,0	0/0:33,0:32:46.01:0,46,620	0/0:47,0:45:53.99:0,54,603	0/0:21,0:21:14.96:0,15,166
chr10	10444122	.	T	TAGACAGAC	14084.08	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=3.166;DP=792;FS=10.528;HRun=0;HaplotypeScore=284.9450;InbreedingCoeff=0.8684;MQ=50.81;MQ0=13;MQRankSum=-5.392;QD=20.01;ReadPosRankSum=1.272;VQSLOD=2.2721;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:30:12.92:184,13,0	1/1:5,0:5:6.02:100,6,0	0/0:18,0:10:23.26:0,23,534	0/0:13,0:6:18.03:0,18,321	0/0:36,0:36:84.73:0,85,1433	1/1:5,23:29:3.01:127,3,0	1/1:23,0:23:24.04:429,24,0	1/1:52,0:49:99:1647,126,0	1/1:3,18:23:9.03:381,9,0	1/1:32,0:32:66.81:1155,67,0	1/1:40,0:40:38.50:581,38,0	1/1:37,0:37:44.23:740,44,0	1/1:11,1:33:26.99:432,27,0	1/1:30,0:30:26.64:493,27,0	1/1:40,0:40:32.77:516,33,0	1/1:27,0:27:42.10:626,42,0	1/1:18,0:18:12.02:156,12,0	1/1:21,0:21:45.04:603,45,0	1/1:26,0:24:63.08:881,63,0	1/1:32,0:32:21.06:263,21,0	1/1:15,0:15:6.02:70,6,0	1/1:26,0:25:41.54:715,42,0	1/1:40,0:40:42.09:694,42,0	1/1:24,0:24:35.77:627,36,0	0/0:21,0:21:51.17:0,51,917	1/1:34,0:33:79.95:1094,80,0	1/1:49,0:48:63.13:979,63,0	1/1:18,0:18:39.13:591,39,0
chr10	10444130	.	C	CAGAG	5304.11	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=1.648;DP=789;FS=5.218;HRun=0;HaplotypeScore=293.8354;InbreedingCoeff=0.1164;MQ=55.84;MQ0=7;MQRankSum=-4.719;QD=8.97;ReadPosRankSum=2.319;VQSLOD=3.4696;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:5.72:0,6,46	0/0:5,0:5:3:0,3,25	0/0:20,0:12:35.59:0,36,562	0/0:17,0:10:27:0,27,375	0/0:36,0:36:90.74:0,91,1392	0/1:28,0:28:26:26,0,39	1/1:19,0:19:3.74:27,4,0	1/1:54,0:54:99:1931,130,0	0/1:21,0:21:11.96:94,0,12	0/1:31,0:31:59.58:60,0,102	0/0:44,0:44:20.66:0,21,163	0/1:34,0:34:8.79:162,0,9	0/1:24,0:24:20.11:20,0,61	0/1:30,0:30:1.35:150,0,1	0/1:40,0:40:10.31:77,0,10	0/0:27,0:27:7.82:0,8,47	1/1:18,0:19:1.68:11,2,0	0/1:22,0:22:28.16:28,0,62	1/1:3,25:31:92.58:1360,93,0	1/1:3,30:34:21.07:563,21,0	1/1:0,18:18:6.02:162,6,0	0/1:29,0:29:48.88:49,0,75	1/1:37,0:37:6.40:111,6,0	0/1:24,0:24:30.71:75,0,31	0/0:19,0:19:54.17:0,54,891	0/1:33,0:32:64.39:64,0,68	1/1:45,0:45:8.34:290,8,0	1/1:17,0:17:7.29:45,7,0
chr10	10444274	.	AATAC	A	9587.86	PASS	AB=0.895;AC=39;AF=0.722;AN=54;BaseQRankSum=-6.661;DP=619;FS=2.311;HRun=0;HaplotypeScore=119.0006;InbreedingCoeff=0.8502;MQ=57.71;MQ0=2;MQRankSum=3.117;QD=23.62;ReadPosRankSum=2.280;VQSLOD=4.3486;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:15,2:17:19.89:127,0,20	1/1:5,7:12:18.01:283,18,0	./.	0/0:12,0:8:3.01:0,3,36	0/0:10,0:29:59.23:0,59,1025	1/1:10,14:24:30.10:472,30,0	1/1:5,11:16:18.06:284,18,0	0/0:45,0:45:35.11:0,35,576	1/1:10,16:27:33.11:520,33,0	1/1:6,14:20:42.13:630,42,0	1/1:4,10:14:27.05:398,27,0	1/1:12,13:25:33.11:520,33,0	1/1:14,10:25:33.11:500,33,0	1/1:8,8:16:18.06:283,18,0	1/1:9,16:25:36.12:567,36,0	1/1:4,16:20:36.12:567,36,0	1/1:6,11:17:33.11:520,33,0	1/1:9,10:19:21.07:331,21,0	0/0:19,0:23:21.07:0,21,368	0/0:26,0:39:55.68:0,56,909	0/0:19,0:20:6.48:0,6,71	1/1:3,13:16:39.13:613,39,0	1/1:6,20:26:39.13:612,39,0	1/1:6,6:12:18.06:283,18,0	0/0:9,0:27:45.15:0,45,783	1/1:6,16:22:42.14:659,42,0	1/1:12,26:38:63.21:992,63,0	1/1:4,11:15:27.09:425,27,0
chr10	10444318	.	C	CAT	3551.74	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-8.830;DP=639;FS=0.000;HRun=0;HaplotypeScore=133.7767;InbreedingCoeff=0.9983;MQ=61.82;MQ0=4;MQRankSum=0.108;QD=35.88;ReadPosRankSum=-2.364;VQSLOD=4.6856;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:54.10:0,54,681	0/0:12,0:12:24.08:0,24,336	0/0:20,0:13:33.08:0,33,433	0/0:17,0:14:27.08:0,27,368	0/0:33,0:33:84.27:0,84,1150	0/0:25,0:25:54.17:0,54,738	0/0:20,0:20:45.13:0,45,610	1/1:7,26:33:78.27:1377,78,0	0/0:23,0:23:57.19:0,57,795	0/0:26,0:26:78.21:0,78,1056	0/0:24,0:24:63.20:0,63,861	0/0:20,0:20:57.17:0,57,779	0/0:19,0:19:51.16:0,51,695	0/0:13,0:13:30.10:0,30,419	0/0:25,0:25:66.22:0,66,922	0/0:19,0:19:45.13:0,45,611	0/0:25,0:25:72.17:0,72,983	0/0:27,0:26:72.24:0,72,1006	1/1:8,10:18:36.04:533,36,0	1/1:7,27:34:69.22:1209,69,0	1/1:2,12:14:24.08:432,24,0	0/0:21,0:21:51.17:0,51,713	0/0:29,0:29:57.19:0,57,794	0/0:16,0:16:45.11:0,45,592	0/0:27,0:27:69.21:0,69,941	0/0:23,0:23:63.20:0,63,865	0/0:41,0:41:99:0,102,1402	0/0:16,0:16:39.10:0,39,509
chr10	10444624	.	GCACACACACACAAACA	G	3495.16	PASS	AB=0.851;AC=37;AF=0.712;AN=52;BaseQRankSum=1.007;DP=484;FS=16.368;HRun=0;HaplotypeScore=163.6531;InbreedingCoeff=0.4668;MQ=56.83;MQ0=9;MQRankSum=-0.348;QD=11.06;ReadPosRankSum=1.937;VQSLOD=1.3948;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:8,0:40:0:0,0,0	1/1:0,5:5:2.75:135,3,0	0/0:28,0:9:5.09:0,5,107	0/0:26,0:13:0.28:0,0,69	0/0:19,0:19:47.39:0,47,613	1/1:1,0:17:2.68:11,3,0	1/1:19,0:19:30.43:249,30,0	0/0:27,0:26:59.68:0,60,497	1/1:2,0:17:3.48:117,3,0	1/1:3,12:15:31.92:358,32,0	1/1:3,0:3:5.99:49,6,0	1/1:3,11:14:5.94:270,6,0	1/1:3,4:7:3.01:122,3,0	1/1:3,16:20:8.99:208,9,0	1/1:1,18:19:6.02:270,6,0	1/1:3,11:14:9.03:303,9,0	1/1:24,0:23:28.34:262,28,0	1/1:11,0:11:4.41:260,4,0	0/1:14,0:14:64.19:64,0,180	0/1:27,0:26:32.91:33,0,335	0/0:34,0:34:61.90:0,62,515	./.	./.	1/1:17,1:18:23.54:211,24,0	0/0:16,0:16:4.63:0,5,1005	1/1:4,9:13:20.98:217,21,0	1/1:14,0:14:29.87:230,30,0	1/1:1,2:3:3.01:126,3,0
chr10	10444637	.	AACACACACACACACACAC	A	1539.24	PASS	AB=1.000;AC=29;AF=0.659;AN=44;BaseQRankSum=5.212;DP=438;FS=6.622;HRun=0;HaplotypeScore=152.8068;InbreedingCoeff=0.2152;MQ=52.94;MQ0=20;MQRankSum=-1.424;QD=6.08;ReadPosRankSum=0.434;VQSLOD=2.2634;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	1/1:5,0:5:2.88:73,3,0	./.	./.	0/0:23,0:23:18.06:0,18,765	1/1:17,0:16:2.80:13,3,0	1/1:18,0:16:5.75:29,6,0	0/0:22,0:20:0:0,0,0	0/1:15,0:15:1.69:113,0,2	1/1:13,0:12:4.02:71,4,0	./.	1/1:11,0:11:6.02:148,6,0	1/1:4,0:4:3.01:60,3,0	0/1:17,0:17:31.25:133,0,31	1/1:18,0:18:6.02:148,6,0	1/1:11,0:11:8.82:116,9,0	0/1:23,0:22:13.15:13,0,29	0/1:11,0:10:61.78:157,0,62	1/1:9,4:13:9.15:207,9,0	1/1:19,8:25:11.92:194,12,0	1/1:30,0:30:16.13:130,16,0	./.	./.	0/1:17,0:17:7.46:7,0,21	0/0:14,0:14:17.14:0,17,1238	0/0:14,0:13:1.77:0,2,46	0/0:14,0:13:5.28:0,5,29	1/1:2,0:2:3.01:63,3,0
chr10	10444819	.	T	TAC	2988.78	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=7.458;DP=516;FS=0.984;HRun=0;HaplotypeScore=82.6653;InbreedingCoeff=0.9873;MQ=68.51;MQ0=1;MQRankSum=-0.784;QD=28.74;ReadPosRankSum=-2.168;VQSLOD=4.4904;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:23:50.97:0,51,586	0/0:7,0:7:18.06:0,18,220	0/0:24,0:22:30.79:0,31,266	0/0:13,0:10:20.94:0,21,217	0/0:22,0:22:57.17:0,57,684	0/0:28,0:28:60.18:0,60,722	0/0:14,0:14:39.11:0,39,464	1/1:12,25:38:51.76:1171,52,0	0/0:18,0:18:48.10:0,48,564	0/0:27,0:29:68.86:0,69,782	0/0:15,0:16:35.92:0,36,395	0/0:14,0:14:36.11:0,36,440	0/0:12,0:12:36.10:0,36,425	0/0:15,0:16:36.06:0,36,422	0/0:12,0:12:36.11:0,36,440	0/0:12,0:12:34.88:0,35,391	0/0:25,0:25:43.57:0,44,586	0/0:19,0:19:51.13:0,51,604	1/1:5,10:15:30.10:461,30,0	1/1:6,26:32:35.65:1031,36,0	1/1:4,14:18:30.10:487,30,0	0/0:5,0:5:15.05:0,15,183	0/0:12,0:12:27.05:0,27,313	0/0:15,0:15:19.46:0,19,254	0/0:9,0:9:18.06:0,18,219	0/0:30,0:31:81.07:0,81,953	0/0:16,0:16:33.09:0,33,390	0/0:19,0:19:48.12:0,48,568
chr10	10447956	.	TACACAC	T	3465.92	PASS	AB=0.698;AC=32;AF=0.593;AN=54;BaseQRankSum=2.858;DP=725;FS=0.725;HRun=0;HaplotypeScore=188.9399;InbreedingCoeff=-0.1418;MQ=59.23;MQ0=18;MQRankSum=-0.030;QD=6.23;ReadPosRankSum=2.168;VQSLOD=2.7086;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:26:30.72:319,31,0	1/1:7,1:10:11.77:108,12,0	./.	0/0:51,0:20:0.89:0,1,2	0/1:5,0:19:0:0,0,0	0/1:5,14:19:11.85:112,0,12	1/1:16,16:32:2.41:26,2,0	0/0:25,0:24:26.65:0,27,183	0/1:15,9:24:5.35:86,0,5	1/1:18,9:27:28.58:496,29,0	0/1:8,9:17:0.13:0,0,0	1/1:11,12:24:14.71:222,15,0	0/1:7,14:21:13.67:62,0,14	0/1:12,13:24:5.53:54,0,6	1/1:14,21:36:14.01:240,14,0	0/1:11,17:32:14.82:372,0,15	0/1:12,14:26:10.47:114,0,10	0/1:16,0:16:5.50:107,0,6	0/1:12,0:22:67.05:128,0,67	1/1:7,0:20:4.05:13,4,0	0/1:43,0:41:4.42:4,0,143	0/1:11,9:20:3.11:13,0,3	0/1:9,7:15:7.35:19,0,7	0/0:22,20:43:1.64:0,2,13	0/1:9,0:24:25.87:117,0,26	0/1:15,9:23:16.20:432,0,16	0/1:14,6:20:9.83:104,0,10	1/1:4,8:12:9.80:319,10,0
chr10	10449279	.	ATATGTG	A	2110.15	PASS	AB=0.515;AC=7;AF=0.125;AN=56;BaseQRankSum=10.959;DP=650;FS=0.000;HRun=0;HaplotypeScore=139.0785;InbreedingCoeff=0.8296;MQ=59.62;MQ0=1;MQRankSum=-6.880;QD=22.94;ReadPosRankSum=-0.691;VQSLOD=2.8178;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:81.22:0,81,2529	0/0:7,0:7:21.07:0,21,705	0/0:21,0:14:23.17:0,23,413	0/0:20,0:13:20.94:0,21,413	0/0:24,0:24:72.19:0,72,2197	0/0:21,0:21:63.14:0,63,1722	0/0:26,0:26:78.20:0,78,2134	0/1:2,0:35:17.72:255,0,18	0/0:14,0:14:39.13:0,39,1371	0/0:30,0:30:87.26:0,87,2472	0/0:26,0:26:76.46:0,76,2333	0/0:20,0:20:54.19:0,54,1863	0/0:21,0:21:60.18:0,60,1870	0/0:19,0:19:57.15:0,57,1683	0/0:37,0:37:99:0,108,3253	0/0:15,0:15:45.14:0,45,1499	0/0:24,0:24:69.20:0,69,2194	0/0:19,0:19:53.95:0,54,1697	1/1:0,10:10:30:502,30,0	1/1:1,29:30:54.16:1176,54,0	1/1:0,17:17:14.02:325,14,0	0/0:24,0:24:63.19:0,63,1938	0/0:29,0:29:78.05:0,78,2397	0/0:22,0:22:54.14:0,54,1648	0/0:32,0:32:93.25:0,93,2769	0/0:27,0:27:78.21:0,78,2479	0/0:30,0:30:81.26:0,81,2669	0/0:15,0:15:45.12:0,45,1474
chr10	10449449	.	C	CGTGTGT	4318.29	PASS	AB=1.000;AC=33;AF=0.717;AN=46;BaseQRankSum=-2.134;DP=513;FS=3.189;HRun=0;HaplotypeScore=141.0230;InbreedingCoeff=0.6204;MQ=67.13;MQ0=10;MQRankSum=-0.176;QD=13.41;ReadPosRankSum=-2.207;VQSLOD=3.7326;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:28:9.03:211,9,0	1/1:8,3:12:6.02:174,6,0	./.	./.	./.	1/1:12,0:12:9.03:146,9,0	1/1:25,0:24:12.30:169,12,0	./.	0/0:11,0:17:4.72:0,5,54	0/1:23,0:23:0.21:0,0,45	0/0:8,0:10:0.48:0,0,2	1/1:20,0:20:12.04:303,12,0	1/1:16,0:16:10.23:127,10,0	1/1:12,0:11:15.02:323,15,0	1/1:22,0:22:15.03:292,15,0	1/1:12,0:10:12.04:315,12,0	1/1:16,7:26:11.90:371,12,0	1/1:11,0:9:12.03:231,12,0	0/0:10,0:18:12.04:0,12,168	0/0:5,0:8:3.01:0,3,42	./.	1/1:24,0:24:9.03:211,9,0	1/1:15,0:15:3.01:91,3,0	1/1:27,0:26:13.94:422,14,0	0/0:14,0:14:6.01:0,6,80	1/1:15,3:20:21.86:428,22,0	1/1:17,0:17:24.05:502,24,0	0/0:9,0:15:0.22:0,0,1
chr10	10451969	.	TCA	T	26257.28	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=2.567;DP=815;FS=0.415;HRun=0;HaplotypeScore=106.9315;InbreedingCoeff=0.9953;MQ=88.48;MQ0=1;MQRankSum=-8.341;QD=36.62;ReadPosRankSum=5.361;VQSLOD=7.0091;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,44:46:99:1764,126,0	1/1:0,13:13:39.13:546,39,0	0/0:32,0:32:75.77:0,76,1431	0/0:26,0:26:66.19:0,66,1097	0/0:16,0:16:39.13:0,39,692	1/1:1,29:30:81.27:1133,81,0	1/1:0,45:45:99:1639,117,0	1/1:1,22:23:69.22:948,69,0	1/1:1,14:15:39.13:546,39,0	1/1:2,20:22:57.19:797,57,0	1/1:1,12:13:33.11:462,33,0	1/1:3,42:45:99:1681,120,0	1/1:4,31:35:84.26:1176,84,0	1/1:4,42:46:99:1638,117,0	1/1:6,56:62:99:2015,144,0	1/1:3,33:36:96.32:1345,96,0	1/1:1,24:25:69.23:966,69,0	1/1:0,30:30:78.26:1092,78,0	1/1:2,18:20:57.18:781,57,0	1/1:3,16:19:48.16:672,48,0	1/1:3,61:64:99:2478,178,0	1/1:3,22:25:69.23:966,69,0	1/1:1,12:13:30.10:420,30,0	1/1:2,34:36:99:1386,99,0	0/0:24,0:24:66.23:0,66,1188	1/1:3,24:27:72.24:1008,72,0	1/1:3,16:19:42.14:588,42,0	1/1:0,7:7:15.05:210,15,0
chr10	10453719	.	C	CT	3481.35	PASS	AB=0.616;AC=32;AF=0.571;AN=56;BaseQRankSum=-5.195;DP=590;FS=3.436;HRun=14;HaplotypeScore=97.9040;InbreedingCoeff=0.4307;MQ=75.43;MQ0=1;MQRankSum=1.696;QD=8.86;ReadPosRankSum=-0.497;VQSLOD=2.9094;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:9,13:22:4.44:203,0,4	0/1:3,4:8:4.43:79,0,4	0/0:25,0:16:4.51:0,5,51	0/0:20,0:16:9.36:0,9,39	0/0:29,0:33:47.72:0,48,298	0/1:7,12:20:27.81:143,0,28	1/1:3,7:11:7.57:180,8,0	0/0:15,0:30:26.33:0,26,76	0/1:7,12:19:5.59:197,0,6	1/1:13,14:27:15.13:247,15,0	1/1:7,12:20:26.81:212,27,0	1/1:7,16:23:24.87:208,25,0	1/1:3,10:13:17.77:158,18,0	1/1:4,9:13:6:53,6,0	1/1:5,12:17:14.74:131,15,0	0/1:12,21:34:0.61:329,0,1	1/1:6,11:17:15:132,15,0	1/1:5,11:16:26.99:237,27,0	0/0:5,0:13:19.58:0,20,68	0/0:6,0:32:43.88:0,44,129	0/0:6,0:17:20.33:0,20,59	1/1:6,10:16:1.73:139,2,0	1/1:13,19:36:8.77:287,9,0	1/1:0,11:13:13.32:173,13,0	0/0:23,0:25:45.22:0,45,280	0/1:10,21:33:2.93:261,0,3	0/1:10,9:19:47.20:47,0,55	0/1:5,11:16:7.27:67,0,7
chr10	10453796	.	TTGTG	T	4787.44	PASS	AB=1.000;AC=28;AF=0.519;AN=54;BaseQRankSum=-1.524;DP=476;FS=3.608;HRun=0;HaplotypeScore=97.8870;InbreedingCoeff=0.5426;MQ=69.34;MQ0=18;MQRankSum=1.258;QD=18.92;ReadPosRankSum=3.410;VQSLOD=4.2484;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:12,0:12:13.96:164,0,14	1/1:5,0:5:12.04:164,12,0	0/0:47,0:28:32.92:0,33,538	0/1:31,0:13:0.02:0,0,150	0/0:24,0:24:44.80:0,45,698	0/0:19,0:18:4.27:0,4,51	0/0:20,0:20:2.58:0,3,21	0/1:29,0:28:5:5,0,621	0/1:16,0:16:1.11:1,0,45	1/1:8,10:18:27.08:393,27,0	./.	0/1:12,0:13:41.51:194,0,42	1/1:11,0:11:25.01:360,25,0	1/1:7,0:7:20.96:298,21,0	1/1:14,0:14:36.10:507,36,0	1/1:23,0:23:51.61:726,52,0	1/1:13,0:13:10.93:332,11,0	1/1:9,0:9:18.93:252,19,0	0/0:9,0:9:12.01:0,12,187	0/0:22,0:21:40.05:0,40,576	0/0:13,0:12:15.52:0,16,230	0/0:4,14:17:2.74:0,3,12	0/0:8,11:19:3.07:0,3,21	1/1:13,0:11:24.03:303,24,0	0/0:24,0:24:51.17:0,51,923	1/1:15,0:15:36.99:521,37,0	1/1:12,0:13:25.61:400,26,0	0/1:11,0:11:6.97:167,0,7
chr10	10470279	.	A	AG	21231.25	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-16.458;DP=800;FS=8.101;HRun=0;HaplotypeScore=74.2636;InbreedingCoeff=0.9996;MQ=92.66;MQ0=0;MQRankSum=-5.698;QD=43.42;ReadPosRankSum=5.708;VQSLOD=4.7333;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,44:45:99:1964,123,0	1/1:0,9:9:24.08:383,24,0	0/0:34,0:34:98.86:0,99,1328	0/0:33,0:33:92.11:0,92,1251	0/0:19,0:19:57.19:0,57,797	0/0:27,0:27:81.27:0,81,1132	0/0:33,0:33:96.31:0,96,1326	0/0:31,0:31:84.28:0,84,1175	0/0:33,0:33:99:0,99,1385	1/1:0,30:30:87.24:1330,87,0	1/1:0,18:18:42.14:671,42,0	1/1:1,35:36:96.33:1532,96,0	1/1:0,30:30:78.27:1247,78,0	1/1:1,29:30:75.26:1199,75,0	1/1:3,39:42:99:1727,108,0	1/1:0,41:41:99:1871,117,0	1/1:1,27:28:78.27:1247,78,0	1/1:0,25:25:69.24:1103,69,0	0/0:31,0:31:87.28:0,87,1200	0/0:13,0:13:36.12:0,36,503	0/0:37,0:37:99:0,108,1492	1/1:0,24:24:60.20:959,60,0	1/1:0,12:12:36.12:575,36,0	1/1:0,48:48:99:2206,138,0	0/0:20,0:20:57.18:0,57,778	1/1:0,29:29:84.26:1300,84,0	1/1:0,31:31:90.31:1438,90,0	1/1:0,11:11:30.10:480,30,0
chr10	10474321	.	G	GATTT	21462.60	PASS	AC=46;AF=0.852;AN=54;BaseQRankSum=-9.808;DP=630;FS=3.373;HRun=0;HaplotypeScore=79.0170;InbreedingCoeff=0.9882;MQ=64.89;MQ0=8;MQRankSum=-0.907;QD=41.59;ReadPosRankSum=1.452;VQSLOD=4.7111;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,24:29:51.05:1206,51,0	1/1:1,9:11:20.81:362,21,0	0/0:20,0:19:32.94:0,33,452	0/0:14,0:10:20.96:0,21,233	0/0:28,0:28:75.19:0,75,1198	1/1:23,0:23:30.10:601,30,0	./.	1/1:5,29:35:89.50:780,90,0	1/1:21,0:21:30.10:609,30,0	1/1:2,29:34:99:1710,99,0	1/1:4,30:33:77.79:1550,78,0	1/1:1,15:16:30.10:779,30,0	1/1:2,20:22:42.14:1089,42,0	1/1:1,15:16:24.08:622,24,0	1/1:0,20:23:39.13:1013,39,0	1/1:0,18:19:21.07:546,21,0	1/1:2,14:16:30.10:779,30,0	1/1:3,14:16:20.66:530,21,0	1/1:4,22:24:69.07:1102,69,0	1/1:0,32:32:83.78:1615,84,0	1/1:2,8:10:21.07:546,21,0	1/1:3,20:23:56.67:1008,57,0	1/1:2,23:25:50.92:1140,51,0	1/1:1,13:18:27.09:701,27,0	0/0:38,0:38:99:0,102,1376	1/1:3,21:25:66.12:1307,66,0	1/1:1,24:26:57.20:1480,57,0	1/1:0,11:11:15.05:389,15,0
chr10	10474325	.	T	TATTTATTC	11402.25	PASS	AB=1.000;AC=42;AF=0.778;AN=54;BaseQRankSum=5.356;DP=648;FS=4.984;HRun=0;HaplotypeScore=155.2147;InbreedingCoeff=0.5569;MQ=64.03;MQ0=9;MQRankSum=0.365;QD=21.31;ReadPosRankSum=5.690;VQSLOD=3.9712;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:28:27.03:460,27,0	1/1:11,0:11:20.80:170,21,0	0/0:21,0:20:35.96:0,36,599	0/0:14,0:10:23.96:0,24,294	0/0:26,0:26:75.20:0,75,1812	1/1:0,21:24:30.10:1313,30,0	./.	0/1:37,0:35:10.18:583,0,10	1/1:3,19:27:30.10:1313,30,0	1/1:35,0:35:41.32:790,41,0	1/1:34,0:33:60.75:668,61,0	1/1:16,0:16:30.06:301,30,0	1/1:22,0:22:42.08:418,42,0	1/1:15,0:15:24.05:239,24,0	1/1:24,0:24:18.11:371,18,0	1/1:21,0:21:21.04:210,21,0	0/1:21,0:20:61.64:255,0,62	1/1:16,0:15:2.97:200,3,0	1/1:30,0:25:45.07:620,45,0	1/1:33,0:33:83.71:777,84,0	0/1:12,0:12:19.82:188,0,20	1/1:22,0:22:56.54:470,57,0	0/1:28,0:28:7.97:410,0,8	1/1:18,0:18:27.06:274,27,0	0/0:37,0:37:99:0,102,1930	1/1:24,0:24:49.10:644,49,0	1/1:26,0:26:57.12:579,57,0	1/1:11,0:11:15.03:150,15,0
chr10	10475711	.	GCACACACACACA	G	4891.33	PASS	AB=0.795;AC=31;AF=0.596;AN=52;BaseQRankSum=4.804;DP=533;FS=7.464;HRun=0;HaplotypeScore=199.1747;InbreedingCoeff=0.4137;MQ=56.48;MQ0=5;MQRankSum=-3.937;QD=12.84;ReadPosRankSum=1.249;VQSLOD=3.2216;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:18,10:27:2.96:57,3,0	0/1:7,0:8:0.90:106,0,1	./.	./.	0/0:8,0:9:12.01:0,12,138	0/0:9,0:12:6.67:0,7,82	0/0:17,0:32:0.69:0,1,73	0/0:14,0:13:8.68:0,9,73	0/1:15,0:25:1.73:2,0,5	1/1:3,6:9:15.03:334,15,0	1/1:6,1:9:5.97:187,6,0	1/1:14,17:32:24.40:741,24,0	1/1:11,7:18:13.52:419,14,0	1/1:16,6:23:6.35:240,6,0	1/1:11,8:21:3.77:362,4,0	1/1:13,7:22:21.07:683,21,0	0/1:26,16:42:1.76:284,0,2	0/1:22,0:25:11.96:150,0,12	0/0:14,0:14:8.49:0,8,56	0/1:13,0:14:0:0,0,0	0/0:42,0:44:10.90:0,11,304	1/1:6,3:9:3.01:103,3,0	0/1:10,4:14:0:0,0,0	0/1:21,18:39:19.29:97,0,19	0/0:4,0:13:12.03:0,12,496	1/1:6,7:13:14.70:283,15,0	1/1:12,8:20:1.10:599,1,0	1/1:3,4:7:9.03:244,9,0
chr10	10477224	.	ATTGTTGTTG	A	2840.47	PASS	AB=0.571;AC=5;AF=0.089;AN=56;BaseQRankSum=9.818;DP=833;FS=0.000;HRun=0;HaplotypeScore=210.3749;InbreedingCoeff=0.7819;MQ=56.74;MQ0=5;MQRankSum=-9.313;QD=35.07;ReadPosRankSum=2.728;VQSLOD=3.2595;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,99,3602	0/0:22,0:22:66.20:0,66,2587	0/0:29,0:18:36.12:0,36,944	0/0:38,0:26:35.10:0,35,842	0/0:23,0:24:60.11:0,60,1869	1/1:5,21:26:30.10:823,30,0	0/1:6,18:24:21.36:835,0,21	0/0:40,0:40:96.29:0,96,2851	1/1:7,24:31:48.16:1312,48,0	0/0:24,0:24:60.20:0,60,1904	0/0:18,0:18:42.06:0,42,1024	0/0:35,0:36:99:0,99,3510	0/0:32,0:32:84.29:0,84,3105	0/0:21,0:21:51.16:0,51,2034	0/0:43,0:43:99:0,117,4665	0/0:24,0:24:63.19:0,63,2460	0/0:34,0:34:93.30:0,93,3700	0/0:30,0:29:81.01:0,81,3103	0/0:18,0:20:48.14:0,48,1443	0/0:30,0:30:84.29:0,84,2917	0/0:43,0:44:99:0,108,3522	0/0:30,0:30:81.24:0,81,2214	0/0:22,0:22:51.08:0,51,1290	0/0:48,0:48:99:0,123,4681	0/0:24,0:24:57.18:0,57,2185	0/0:29,0:28:72.24:0,72,2194	0/0:30,0:33:90.27:0,90,3329	0/0:16,0:16:39.13:0,39,1531
chr10	10478203	.	G	GA	2878.26	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-11.691;DP=683;FS=0.463;HRun=1;HaplotypeScore=62.7430;InbreedingCoeff=0.9802;MQ=77.93;MQ0=0;MQRankSum=-0.044;QD=37.87;ReadPosRankSum=2.132;VQSLOD=4.2391;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,135,1719	0/0:14,0:14:42.09:0,42,512	0/0:26,0:26:71:0,71,871	0/0:24,0:23:54.17:0,54,696	0/0:25,0:25:66.21:0,66,852	1/1:1,28:29:78.26:1168,78,0	1/1:1,25:26:77.93:1133,78,0	0/0:28,0:28:78.21:0,78,947	1/1:2,19:21:48.16:719,48,0	0/0:30,0:30:90.29:0,90,1168	0/0:14,0:13:39.12:0,39,494	0/0:29,0:29:87.27:0,87,1115	0/0:22,0:22:66.21:0,66,856	0/0:23,0:23:66.19:0,66,828	0/0:24,0:24:69.22:0,69,883	0/0:17,1:18:9.21:0,9,617	0/0:28,0:28:81.26:0,81,1051	0/0:16,0:16:48.13:0,48,607	0/0:24,0:24:72.23:0,72,934	0/0:26,0:26:75.22:0,75,945	0/0:45,0:45:99:0,135,1689	0/0:25,0:25:75.23:0,75,958	0/0:12,0:12:36.10:0,36,452	0/0:28,0:28:84.27:0,84,1089	0/0:15,0:15:45.13:0,45,570	0/0:26,0:26:75.24:0,75,968	0/0:21,0:20:63.20:0,63,816	0/0:15,0:15:45.15:0,45,584
chr10	10478786	.	GCC	G	2565.97	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=5.690;DP=687;FS=9.946;HRun=3;HaplotypeScore=122.4734;InbreedingCoeff=0.9962;MQ=86.39;MQ0=0;MQRankSum=-2.560;QD=35.64;ReadPosRankSum=1.452;VQSLOD=2.6163;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,123,2330	0/0:8,0:8:24.08:0,24,461	0/0:24,0:24:69.21:0,69,1274	0/0:24,0:24:65.85:0,66,1029	0/0:12,0:12:33.11:0,33,624	1/1:0,14:14:42.14:643,42,0	1/1:1,31:32:87.30:1331,87,0	0/0:21,0:21:60.19:0,60,1126	1/1:1,25:26:48.16:735,48,0	0/0:26,0:26:75.26:0,75,1449	0/0:12,0:12:35.48:0,35,639	0/0:32,0:32:96.32:0,96,1816	0/0:35,0:35:99:0,105,2012	0/0:26,0:26:78.24:0,78,1410	0/0:28,0:28:84.29:0,84,1609	0/0:26,0:26:75.26:0,75,1440	0/0:33,0:33:96.33:0,96,1841	0/0:29,0:29:87.30:0,87,1681	0/0:25,0:25:73.48:0,73,1363	0/0:21,0:21:63.21:0,63,1185	0/0:63,0:63:99:0,187,3519	0/0:13,0:13:39.12:0,39,721	0/0:13,0:13:36.06:0,36,654	0/0:35,0:35:99:0,105,1993	0/0:15,0:15:45.14:0,45,817	0/0:30,0:30:90.30:0,90,1699	0/0:16,0:16:48.12:0,48,878	0/0:6,0:6:18.06:0,18,348
chr10	10481628	.	C	CCCACCACCA	1670.76	PASS	AB=1.000;AC=35;AF=0.795;AN=44;BaseQRankSum=-1.310;DP=274;FS=4.196;HRun=0;HaplotypeScore=78.9273;InbreedingCoeff=0.3167;MQ=80.62;MQ0=13;MQRankSum=-1.531;QD=10.13;ReadPosRankSum=-2.269;VQSLOD=1.2067;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:14:3.45:23,3,0	./.	./.	./.	0/0:5,0:5:9.03:0,9,245	1/1:9,0:8:0.66:21,1,0	1/1:12,0:9:6.47:131,6,0	1/1:17,0:17:0.47:1,0,0	./.	1/1:11,3:13:4.08:137,4,0	1/1:3,0:3:3.01:67,3,0	1/1:8,0:8:6.02:219,6,0	1/1:3,0:2:3.01:58,3,0	1/1:8,2:9:3.01:123,3,0	1/1:4,1:5:3.48:136,3,0	1/1:4,6:10:9.50:404,10,0	1/1:10,4:15:6.91:193,7,0	1/1:4,0:3:3.01:136,3,0	./.	0/0:7,0:10:6.02:0,6,126	0/0:14,0:23:2.14:0,2,59	1/1:6,0:6:2.99:24,3,0	0/1:4,0:4:0:0,0,0	1/1:14,0:13:3:27,3,0	0/0:7,0:7:2.11:0,2,45	1/1:9,0:9:3.01:37,3,0	1/1:6,0:5:3.48:52,3,0	./.
chr10	10482192	.	AGCGCAT	A	7547.49	PASS	AB=0.884;AC=36;AF=0.643;AN=56;BaseQRankSum=-4.478;DP=509;FS=2.519;HRun=0;HaplotypeScore=135.4948;InbreedingCoeff=0.0377;MQ=80.53;MQ0=2;MQRankSum=-2.084;QD=16.44;ReadPosRankSum=0.396;VQSLOD=4.2270;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:31,8:37:22.07:518,0,22	0/0:2,4:6:3:0,3,27	0/0:16,0:13:16.45:0,16,129	0/1:26,0:23:6.25:6,0,305	0/0:13,0:13:36.09:0,36,704	1/1:0,12:12:3.01:65,3,0	1/1:2,27:29:3.47:49,3,0	1/1:21,0:21:54.92:417,55,0	1/1:1,29:30:15.05:284,15,0	1/1:23,2:25:29.34:783,29,0	0/1:3,9:11:0:0,0,0	1/1:21,1:22:9.43:572,9,0	1/1:16,2:18:19.70:551,20,0	1/1:13,3:16:1.90:358,2,0	1/1:24,3:27:18.61:902,19,0	0/1:16,1:17:53.50:471,0,53	0/1:14,1:15:10.46:334,0,10	0/1:14,0:14:31.84:315,0,32	0/1:21,0:21:3.85:229,0,4	0/1:11,0:11:6.82:17,0,7	1/1:33,0:33:2.96:20,3,0	0/1:6,2:8:12.78:89,0,13	0/1:4,0:4:10.10:126,0,10	0/1:22,0:22:16.25:475,0,16	0/0:15,0:15:38.95:0,39,856	1/1:15,2:17:44.73:723,45,0	0/1:4,14:18:58.50:176,0,59	1/1:1,0:1:3.01:67,3,0
chr10	10482197	.	ATG	A	2431.71	PASS	AB=1.000;AC=27;AF=0.482;AN=56;BaseQRankSum=1.813;DP=493;FS=42.593;HRun=0;HaplotypeScore=126.3278;InbreedingCoeff=-0.1226;MQ=71.55;MQ0=3;MQRankSum=1.235;QD=6.64;ReadPosRankSum=3.821;VQSLOD=1.5688;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:36,0:34:86.63:87,0,111	0/0:5,0:5:3.01:0,3,34	0/0:10,0:7:17.99:0,18,192	0/0:22,0:18:6.86:0,7,346	0/0:15,0:15:35.20:0,35,662	1/1:12,0:12:2.92:17,3,0	0/0:27,0:27:0.69:0,1,2	1/1:1,20:21:54.83:691,55,0	1/1:29,0:29:6.32:46,6,0	0/1:25,0:25:99:146,0,141	0/1:11,0:10:0:0,0,0	0/1:20,0:20:26.58:181,0,27	0/1:20,0:20:92.72:103,0,93	0/1:15,0:15:45.14:49,0,45	0/1:25,0:25:35.83:168,0,36	0/1:20,0:20:89.49:124,0,89	0/1:15,0:15:61.33:81,0,61	0/1:15,0:15:51.25:51,0,119	1/1:4,15:19:32.89:426,33,0	1/1:0,11:11:6.02:82,6,0	0/0:3,29:32:4.65:0,5,29	0/1:7,0:6:16.50:16,0,22	0/1:5,0:5:4.11:4,0,58	0/1:24,0:24:79.95:99,0,80	0/0:16,0:16:39.01:0,39,776	0/1:17,0:17:2.63:199,0,3	0/1:18,0:18:8.30:8,0,57	1/1:1,0:1:2.90:16,3,0
chr10	10482203	.	ACG	A	3107.72	PASS	AB=0.972;AC=32;AF=0.571;AN=56;BaseQRankSum=0.505;DP=547;FS=18.584;HRun=0;HaplotypeScore=133.0395;InbreedingCoeff=-0.1013;MQ=61.15;MQ0=6;MQRankSum=0.382;QD=6.71;ReadPosRankSum=2.895;VQSLOD=1.9081;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:39,0:37:22.38:238,0,22	0/0:6,0:6:5.83:0,6,33	0/0:8,0:5:1.90:0,2,29	0/1:16,0:12:23.21:23,0,64	0/0:13,1:14:6.52:0,7,204	0/1:13,0:13:6.26:6,0,18	1/1:32,0:32:2.45:17,2,0	1/1:21,0:21:26.10:296,26,0	1/1:31,0:31:3.91:54,4,0	0/1:27,0:27:31.58:289,0,32	0/1:17,0:16:0:0,0,0	0/1:18,1:19:6.23:195,0,6	0/1:22,2:23:27.32:246,0,27	0/1:19,1:19:5.71:100,0,6	1/1:27,0:28:18.68:331,19,0	0/1:21,2:23:39.79:220,0,40	1/1:17,1:18:0.09:200,0,0	0/1:15,1:16:59.15:103,0,59	1/1:20,0:21:20.77:172,21,0	1/1:11,0:12:5.92:40,6,0	0/0:39,0:38:9.69:0,10,87	0/1:10,0:9:5.36:39,0,5	0/1:6,0:6:15.17:15,0,27	0/1:28,1:28:6.38:334,0,6	0/0:17,0:17:4.86:0,5,253	1/1:17,0:17:26.73:269,27,0	0/1:22,0:23:31.82:55,0,32	1/1:1,0:1:2.98:22,3,0
chr10	10483231	.	TAC	T	367.03	PASS	AB=1.000;AC=18;AF=0.818;AN=22;BaseQRankSum=1.129;DP=412;FS=0.000;HRun=0;HaplotypeScore=51.2866;InbreedingCoeff=0.2314;MQ=50.44;MQ0=26;MQRankSum=1.129;QD=2.28;ReadPosRankSum=0.598;VQSLOD=0.9525;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:20:0.47:1,0,0	0/0:4,0:4:3.01:0,3,42	./.	./.	./.	./.	./.	./.	./.	./.	./.	0/1:12,0:12:16.35:16,0,37	1/1:8,0:6:2.98:22,3,0	0/1:15,0:15:0:0,0,0	1/1:12,0:12:2.94:18,3,0	1/1:8,0:8:6:55,6,0	1/1:19,5:24:14.83:139,15,0	1/1:16,2:16:6.48:63,6,0	./.	./.	./.	./.	./.	1/1:18,4:22:6.01:63,6,0	./.	./.	1/1:17,1:18:8.65:76,9,0	./.
chr10	10485995	.	G	GT	16566	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-9.287;DP=667;FS=7.294;HRun=6;HaplotypeScore=60.4730;InbreedingCoeff=0.9985;MQ=70.24;MQ0=2;MQRankSum=-4.527;QD=30.17;ReadPosRankSum=2.857;VQSLOD=5.5429;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,39:42:96.31:1208,96,0	1/1:1,7:8:21.07:264,21,0	0/0:37,0:26:54.16:0,54,524	0/0:37,0:25:26.94:0,27,291	0/0:23,0:23:63.13:0,63,635	1/1:5,19:24:54.17:679,54,0	1/1:2,19:21:45.14:566,45,0	1/1:3,25:28:72.21:891,72,0	1/1:4,24:28:66.21:830,66,0	1/1:2,19:21:57.17:704,57,0	1/1:3,22:25:60.19:755,60,0	1/1:3,20:23:51.16:642,51,0	1/1:3,19:22:51.16:641,51,0	1/1:1,14:15:36.12:452,36,0	1/1:1,23:24:60.19:754,60,0	1/1:1,23:24:60.19:755,60,0	1/1:1,19:20:51.11:622,51,0	1/1:3,21:24:60.19:755,60,0	1/1:2,21:23:66.14:768,66,0	1/1:2,16:18:42.13:528,42,0	1/1:3,20:23:57.18:717,57,0	1/1:0,17:17:45.14:566,45,0	1/1:2,17:19:51.16:640,51,0	1/1:1,28:29:60.19:755,60,0	0/0:17,0:17:51.12:0,51,520	1/1:2,31:33:87.23:1054,87,0	1/1:4,19:23:45.14:566,45,0	1/1:3,12:15:36.12:453,36,0
chr10	10487957	.	GC	G	3213.72	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=10.300;DP=667;FS=0.871;HRun=2;HaplotypeScore=61.3087;InbreedingCoeff=0.9942;MQ=90.74;MQ0=0;MQRankSum=0.955;QD=34.93;ReadPosRankSum=-1.000;VQSLOD=3.5282;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,144,2092	0/0:7,0:7:21.04:0,21,292	0/0:30,0:30:87.18:0,87,1153	0/0:22,0:22:56.23:0,56,803	0/0:34,0:34:99:0,102,1513	0/0:15,0:15:42.14:0,42,628	0/0:32,0:32:96.21:0,96,1332	1/1:0,23:23:69.21:882,69,0	0/0:22,0:22:66.22:0,66,987	0/0:28,0:28:84.28:0,84,1241	0/0:10,0:10:30.10:0,30,449	0/0:26,0:26:75.23:0,75,1084	0/0:26,0:26:78.24:0,78,1146	0/0:38,0:38:99:0,114,1663	0/0:29,0:29:87.28:0,87,1282	0/0:22,0:22:66.20:0,66,948	0/0:27,0:26:81.17:0,81,1183	0/0:18,0:17:54.18:0,54,808	1/1:0,31:31:93.29:1193,93,0	1/1:0,11:11:33.07:404,33,0	1/1:1,26:27:69.22:895,69,0	0/0:25,0:25:75.23:0,75,1085	0/0:16,0:16:48.15:0,48,695	0/0:21,0:21:63.16:0,63,882	0/0:25,0:25:75.25:0,75,1122	0/0:23,0:23:69.23:0,69,1014	0/0:25,0:25:75.19:0,75,1095	0/0:6,0:6:15.02:0,15,182
chr10	10488237	.	T	TACAC	2527.75	PASS	AB=0.667;AC=11;AF=0.204;AN=54;BaseQRankSum=-1.128;DP=684;FS=10.057;HRun=0;HaplotypeScore=130.2823;InbreedingCoeff=0.7859;MQ=66.51;MQ0=8;MQRankSum=-0.279;QD=17.80;ReadPosRankSum=-3.869;VQSLOD=2.0116;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:38:81.24:0,81,1220	0/0:5,0:5:12.04:0,12,175	0/0:33,0:18:9.03:0,9,129	0/0:37,0:22:11.73:0,12,127	0/0:14,0:16:3.11:0,3,322	1/1:9,10:22:26.83:547,27,0	0/1:18,16:36:25.41:829,0,25	1/1:19,0:15:9.02:127,9,0	1/1:5,14:22:32.42:793,32,0	0/0:19,0:20:9.66:0,10,303	0/0:10,0:11:27.07:0,27,391	0/0:24,0:30:63.19:0,63,944	0/0:14,0:16:30.07:0,30,409	0/0:22,0:24:42.14:0,42,656	0/0:38,0:41:84.24:0,84,1239	0/0:27,0:30:59.69:0,60,1048	0/0:39,0:41:81.24:0,81,1226	0/0:20,0:21:44.58:0,45,650	1/1:19,0:19:18.43:269,18,0	./.	1/1:24,0:22:8.96:131,9,0	0/0:25,0:25:15.14:0,15,490	0/0:17,0:18:27.08:0,27,406	0/0:44,0:44:84.29:0,84,1345	0/0:19,0:22:38.61:0,39,718	0/0:18,0:20:51.16:0,51,776	0/0:26,0:27:60.19:0,60,925	0/0:7,0:11:30.06:0,30,373
chr10	10489019	.	CA	C	6766.50	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-8.110;DP=605;FS=13.533;HRun=11;HaplotypeScore=80.3954;InbreedingCoeff=0.9905;MQ=65.33;MQ0=1;MQRankSum=-0.337;QD=18.34;ReadPosRankSum=5.087;VQSLOD=4.6317;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,32:39:82.92:670,83,0	1/1:2,8:10:23.97:197,24,0	0/0:16,0:12:17.28:0,17,136	0/0:18,0:13:11.77:0,12,116	0/0:24,0:24:54.13:0,54,574	0/0:4,0:17:43.44:0,43,243	0/0:5,0:24:57.61:0,58,339	0/0:12,0:34:64.47:0,64,378	0/0:1,0:18:16.93:0,17,86	1/1:2,21:24:61:478,61,0	1/1:0,15:15:41.95:345,42,0	1/1:2,8:10:23.97:197,24,0	1/1:4,12:17:34.98:277,35,0	1/1:0,13:13:35.96:296,36,0	1/1:2,13:15:35.94:296,36,0	1/1:2,8:11:20.01:154,20,0	1/1:5,37:44:99:874,109,0	1/1:2,32:35:85.93:695,86,0	0/0:4,0:23:52.63:0,53,273	0/0:4,0:15:22.86:0,23,120	0/0:3,0:22:48.80:0,49,243	1/1:1,14:17:37:283,37,0	1/1:1,14:15:35.95:295,36,0	1/1:10,18:29:52.94:425,53,0	0/0:22,1:23:29.41:0,29,483	1/1:6,20:26:59.92:493,60,0	1/1:6,25:32:61.93:498,62,0	1/1:4,13:17:35.91:295,36,0
chr10	10491199	.	G	GTA	6270.95	PASS	AB=0.958;AC=15;AF=0.288;AN=52;BaseQRankSum=-6.488;DP=676;FS=3.212;HRun=0;HaplotypeScore=82.4442;InbreedingCoeff=0.8765;MQ=36.41;MQ0=90;MQRankSum=-2.489;QD=26.91;ReadPosRankSum=-0.801;VQSLOD=5.6873;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:26:48.14:0,48,756	0/0:3,0:2:6.02:0,6,98	./.	./.	0/0:19,0:16:20.80:0,21,315	1/1:3,19:16:21.07:425,21,0	1/1:1,18:12:21.07:425,21,0	1/1:3,28:24:66.19:1286,66,0	1/1:0,35:30:54.19:1096,54,0	0/0:22,0:12:30.08:0,30,463	0/0:10,0:9:15.05:0,15,244	0/0:28,0:24:36.10:0,36,561	0/0:21,0:19:45.14:0,45,705	0/0:24,0:23:27.09:0,27,434	0/0:33,0:29:45.15:0,45,730	0/1:22,1:21:15.54:16,0,613	0/0:49,0:40:60.20:0,60,973	0/0:24,0:22:39.13:0,39,612	1/1:3,25:21:63.17:1186,63,0	1/1:0,17:14:39.09:749,39,0	1/1:2,51:41:57.15:1089,57,0	0/0:21,0:15:24.08:0,24,387	0/0:17,0:14:14.68:0,15,244	0/0:27,0:19:24.08:0,24,382	0/0:12,0:12:24.08:0,24,384	0/0:21,0:19:57.19:0,57,921	0/0:34,0:26:44.81:0,45,691	0/0:14,0:7:12.04:0,12,196
chr10	10492934	.	GGT	G	1873.95	PASS	AB=0.902;AC=23;AF=0.442;AN=52;BaseQRankSum=-2.846;DP=889;FS=0.593;HRun=0;HaplotypeScore=115.1045;InbreedingCoeff=0.0823;MQ=28.84;MQ0=145;MQRankSum=3.512;QD=3.85;ReadPosRankSum=4.370;VQSLOD=2.2605;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:35,5:31:17.27:197,17,0	0/1:12,0:9:13.43:13,0,35	./.	./.	0/0:23,0:15:6.02:0,6,68	0/0:16,0:11:12.04:0,12,174	0/0:49,0:41:24.33:0,24,667	0/0:70,0:35:19.79:0,20,197	0/0:28,0:20:25.86:0,26,291	0/1:40,7:29:99:157,0,119	1/1:14,3:8:3.01:37,3,0	0/1:34,3:30:36.80:37,0,219	0/1:30,4:22:82.11:82,0,163	0/0:29,4:21:2.72:0,3,13	0/1:20,3:11:41.20:41,0,56	1/1:19,4:14:9.22:175,9,0	1/1:29,11:32:27.70:508,28,0	0/1:27,6:30:65.99:238,0,66	0/0:26,0:2:2.99:0,3,23	0/1:17,0:11:0.35:0,0,1	0/0:41,0:21:9.77:0,10,64	1/1:14,2:10:6.02:74,6,0	0/1:23,1:17:6.57:42,0,7	0/1:38,8:33:13.17:158,0,13	0/0:31,0:24:22.03:0,22,306	0/1:34,3:20:32.16:32,0,35	1/1:12,4:15:15.93:186,16,0	0/1:13,6:13:39.86:63,0,40
chr10	10493022	.	G	GTGA	396.58	PASS	AB=0.971;AC=14;AF=0.292;AN=48;BaseQRankSum=3.513;DP=655;FS=11.948;HRun=0;HaplotypeScore=87.4586;InbreedingCoeff=0.3128;MQ=21.58;MQ0=117;MQRankSum=-1.032;QD=2.92;ReadPosRankSum=1.150;VQSLOD=0.2162;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:14,2:11:4.82:0,5,56	./.	0/0:78,0:3:8.76:0,9,91	0/0:90,0:6:15.05:0,15,211	0/0:28,0:22:23.91:0,24,357	0/0:13,0:11:15.03:0,15,229	0/0:36,0:26:22.56:0,23,314	0/0:92,0:50:53.87:0,54,698	0/0:21,0:15:26.78:0,27,399	0/1:24,0:10:87.01:87,0,93	./.	1/1:15,0:11:8.60:131,9,0	0/1:10,0:8:8.54:48,0,9	0/0:2,0:2:0:0,0,0	1/1:10,0:3:2.84:14,3,0	0/1:8,1:5:0.62:43,0,1	1/1:9,1:9:15.22:141,15,0	0/1:10,0:6:5.35:5,0,46	0/0:23,0:2:5.89:0,6,66	0/1:8,0:2:0.02:0,0,0	0/0:67,0:43:1.94:0,2,7	0/1:10,1:6:0:0,0,0	0/1:6,0:3:0:0,0,0	0/0:18,2:14:0.95:0,1,2	0/0:13,0:8:6.01:0,6,83	0/1:18,1:10:57.22:57,0,88	./.	./.
chr10	10493048	.	G	GGTGTGGT	1695.07	PASS	AB=0.980;AC=24;AF=0.462;AN=52;BaseQRankSum=0.876;DP=645;FS=12.699;HRun=0;HaplotypeScore=96.6174;InbreedingCoeff=0.0608;MQ=19.39;MQ0=120;MQRankSum=-1.280;QD=5.12;ReadPosRankSum=-0.173;VQSLOD=0.7437;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:19,0:14:0.02:0,0,0	0/1:6,0:4:0:0,0,0	0/0:99,0:2:3.01:0,3,72	0/0:109,0:9:24.08:0,24,519	0/0:25,0:22:17.83:0,18,391	1/1:13,0:12:7.24:187,7,0	0/1:36,3:31:89.81:90,0,167	0/1:60,0:29:99:148,0,104	0/1:18,1:14:53.15:587,0,53	1/1:19,0:8:6.02:123,6,0	./.	0/1:13,1:10:22.06:31,0,22	0/1:12,0:10:22.02:80,0,22	1/1:6,0:5:4.22:63,4,0	1/1:6,0:5:1.69:35,2,0	1/1:10,1:5:3.01:99,3,0	0/1:16,0:10:48.48:111,0,48	0/1:9,0:5:1.27:13,0,1	0/0:19,0:2:6.02:0,6,97	0/0:11,0:1:0:0,0,0	0/1:55,0:29:0.02:0,0,0	0/0:8,0:4:0.47:0,0,1	0/1:4,0:2:0:0,0,0	0/0:11,0:5:0:0,0,0	0/0:20,0:14:11.70:0,12,153	0/1:17,0:11:35.45:214,0,35	./.	1/1:3,0:2:3.01:47,3,0
chr10	10493059	.	GTGT	G	476.92	PASS	AB=0.955;AC=13;AF=0.241;AN=54;BaseQRankSum=5.153;DP=780;FS=4.125;HRun=0;HaplotypeScore=99.2177;InbreedingCoeff=-0.0784;MQ=20.50;MQ0=150;MQRankSum=-2.353;QD=1.54;ReadPosRankSum=0.048;VQSLOD=1.8619;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:20:15.05:0,15,123	./.	0/0:108,0:2:6.02:0,6,77	0/0:108,0:10:23.99:0,24,351	0/0:19,0:16:23.45:0,23,445	0/1:14,1:14:33.42:70,0,33	0/1:41,1:32:76.84:77,0,156	0/1:80,0:38:70.68:71,0,179	0/1:24,4:19:60.33:207,0,60	0/0:24,0:9:18.03:0,18,223	0/0:8,0:4:2.98:0,3,21	0/1:17,1:13:30.23:30,0,42	0/1:17,0:13:7.18:7,0,218	0/0:16,0:14:14.76:0,15,200	0/1:8,0:5:15.14:15,0,34	0/0:20,0:14:16.25:0,16,182	0/0:21,0:14:21.36:0,21,370	0/1:13,0:8:31.37:31,0,70	0/0:31,0:4:9.02:0,9,105	1/1:9,0:3:2.97:20,3,0	1/1:57,0:30:2.60:10,3,0	0/0:14,0:9:8.28:0,8,64	0/0:6,0:4:0:0,0,0	0/0:23,0:15:1.61:0,2,101	0/0:19,0:15:17.66:0,18,341	0/1:18,1:12:79.17:79,0,190	0/0:8,0:3:3.01:0,3,65	0/0:5,0:4:9.03:0,9,151
chr10	10493062	.	T	TC	330.04	PASS	AB=0.953;AC=10;AF=0.185;AN=54;BaseQRankSum=3.351;DP=818;FS=16.302;HRun=0;HaplotypeScore=112.6410;InbreedingCoeff=-0.0875;MQ=20.70;MQ0=168;MQRankSum=-2.515;QD=1.01;ReadPosRankSum=1.112;VQSLOD=1.3947;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:21:14.73:0,15,132	./.	0/0:105,0:2:6.02:0,6,80	0/0:109,0:10:24.05:0,24,312	0/0:19,0:16:23.57:0,24,293	0/1:18,0:15:24.75:25,0,42	0/1:40,4:32:47.83:168,0,48	0/1:81,0:37:34.33:34,0,188	0/1:28,2:20:40.45:131,0,40	0/0:25,0:9:11.33:0,11,180	0/0:7,0:5:2.98:0,3,21	0/1:22,0:14:5.24:14,0,5	0/0:16,0:13:16.75:0,17,209	0/0:22,0:17:14.68:0,15,183	0/0:7,0:4:5.99:0,6,59	0/0:23,0:15:20.57:0,21,217	0/0:22,0:13:14.22:0,14,337	0/1:16,0:11:28.90:29,0,121	0/1:36,1:4:38.94:39,0,58	0/0:11,0:3:0:0,0,0	1/1:54,0:27:1.55:4,2,0	0/0:13,0:8:5.91:0,6,58	0/0:7,1:5:3:0,3,41	0/0:26,0:17:6.84:0,7,86	0/0:24,0:18:20.81:0,21,249	0/1:19,0:12:16.08:16,0,142	0/0:7,0:3:3.01:0,3,41	0/0:6,0:5:9:0,9,105
chr10	10493237	.	G	GGTGTGT	5697.19	PASS	AB=0.984;AC=46;AF=0.821;AN=56;BaseQRankSum=0.579;DP=1058;FS=1.763;HRun=0;HaplotypeScore=190.6156;InbreedingCoeff=0.4746;MQ=28.64;MQ0=132;MQRankSum=-4.286;QD=6.01;ReadPosRankSum=0.886;VQSLOD=3.9546;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:50,3:44:21.20:576,21,0	1/1:16,5:15:11.98:381,12,0	0/0:64,0:18:13.50:0,13,240	0/1:71,0:15:30.80:31,0,285	0/0:27,0:23:30.23:0,30,465	1/1:32,0:22:14.83:187,15,0	1/1:57,1:39:24.03:345,24,0	0/1:43,0:22:0.52:122,0,1	1/1:32,0:21:8.47:164,8,0	1/1:48,0:22:11.99:189,12,0	0/1:28,1:15:21.68:44,0,22	1/1:25,3:23:18.27:387,18,0	1/1:21,0:17:12.03:172,12,0	1/1:18,3:16:12.21:404,12,0	1/1:26,2:20:15.21:345,15,0	1/1:19,5:18:8.97:294,9,0	1/1:35,1:32:18.02:366,18,0	1/1:36,2:26:28.21:471,28,0	1/1:49,0:17:9.76:168,10,0	1/1:27,0:22:5.81:33,6,0	0/1:114,0:58:0:1,0,0	1/1:30,0:26:9.50:155,10,0	1/1:18,0:16:8.28:141,8,0	1/1:24,11:29:8.01:129,8,0	0/0:17,0:14:14.61:0,15,279	1/1:34,2:23:24.03:401,24,0	1/1:13,0:11:4.40:25,4,0	1/1:15,3:13:6.02:165,6,0
chr10	10493782	.	GAGAGA	G	2232.86	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=8.968;DP=687;FS=18.084;HRun=0;HaplotypeScore=125.7937;InbreedingCoeff=0.9923;MQ=68.28;MQ0=9;MQRankSum=3.556;QD=25.67;ReadPosRankSum=-2.058;VQSLOD=1.9383;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:85.43:0,85,1985	0/0:5,0:5:15.02:0,15,315	0/0:57,0:26:27.54:0,28,294	0/0:64,0:27:40.36:0,40,583	0/0:25,0:25:72.15:0,72,1599	0/0:30,0:30:66.08:0,66,1277	0/0:18,0:18:29.99:0,30,346	1/1:11,19:31:32.09:475,32,0	0/0:16,0:16:24.07:0,24,508	0/0:28,0:29:81.19:0,81,1738	0/0:20,0:19:54.14:0,54,1254	0/0:21,0:21:63.19:0,63,1651	0/0:13,0:13:33.09:0,33,785	0/0:20,0:20:57.14:0,57,1314	0/0:27,0:27:60.17:0,60,1508	0/0:27,0:27:63.20:0,63,1574	0/0:28,0:28:72.12:0,72,1718	0/0:25,0:25:63.15:0,63,1563	1/1:2,14:16:38.95:488,39,0	1/1:1,20:21:53.98:904,54,0	1/1:3,16:19:18.80:525,19,0	0/0:16,0:16:39.09:0,39,822	0/0:19,0:19:54.04:0,54,1061	0/0:22,0:22:62.37:0,62,1558	0/0:24,0:23:60.19:0,60,1604	0/0:23,0:23:63.16:0,63,1436	0/0:27,0:26:72.13:0,72,1623	0/0:11,0:11:30.09:0,30,830
chr10	10493793	.	A	AGAGAG	1835.35	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-6.660;DP=704;FS=16.905;HRun=0;HaplotypeScore=126.2912;InbreedingCoeff=0.8464;MQ=62.61;MQ0=17;MQRankSum=-1.424;QD=27.39;ReadPosRankSum=-1.479;VQSLOD=2.2224;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:30:60.19:0,60,1054	0/0:6,0:6:12.03:0,12,173	0/0:64,0:21:13.71:0,14,149	0/0:78,0:28:0.66:0,1,141	0/0:27,0:27:50.86:0,51,877	1/1:5,28:33:48.16:1368,48,0	1/1:10,9:19:6.02:171,6,0	0/0:23,0:23:11.64:0,12,109	1/1:3,12:15:15.05:428,15,0	0/0:30,0:30:54.15:0,54,873	0/0:23,0:22:45.11:0,45,705	0/0:23,0:23:54.15:0,54,907	0/0:12,0:12:27.08:0,27,459	0/0:19,0:19:39.13:0,39,704	0/0:23,0:23:54.16:0,54,889	0/0:23,0:23:51.14:0,51,816	0/0:33,0:33:72.14:0,72,1107	0/0:23,0:23:60.11:0,60,970	0/0:18,0:17:21.05:0,21,245	0/0:22,0:22:45.52:0,46,519	0/0:21,0:21:36.10:0,36,430	0/0:14,0:14:27.06:0,27,401	0/0:18,0:18:27.08:0,27,459	0/0:23,0:23:60.17:0,60,991	0/0:27,0:26:66.15:0,66,1013	0/0:21,0:21:42.13:0,42,735	0/0:25,0:24:51.16:0,51,864	0/0:10,0:10:27.09:0,27,486
chr10	10494745	.	GAAAAAAA	G	2111.57	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=4.211;DP=389;FS=15.209;HRun=14;HaplotypeScore=106.0133;InbreedingCoeff=0.9224;MQ=48.49;MQ0=11;MQRankSum=-5.589;QD=29.33;ReadPosRankSum=0.435;VQSLOD=0.3405;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:15:30.10:0,30,1049	0/0:3,0:2:6.02:0,6,227	0/0:2,0:3:9.03:0,9,242	0/0:6,0:3:9.03:0,9,179	0/0:19,0:20:45.15:0,45,1526	0/0:15,0:16:42.11:0,42,1302	0/0:23,0:25:69.24:0,69,2464	1/1:5,14:19:45.04:926,45,0	0/0:10,0:12:27.09:0,27,945	0/0:17,0:16:39.13:0,39,1285	0/0:8,0:7:16.87:0,17,510	0/0:13,0:16:30.10:0,30,1053	0/0:9,0:8:24.08:0,24,882	0/0:16,0:15:30.10:0,30,1101	0/0:16,0:19:48.16:0,48,1566	0/0:11,0:12:33.11:0,33,1198	0/0:12,0:12:33.11:0,33,1176	0/0:11,0:11:30.10:0,30,1079	1/1:3,13:14:36.06:733,36,0	1/1:5,7:11:17.93:338,18,0	1/1:10,15:22:12.39:271,12,0	0/0:9,0:10:30.10:0,30,1056	0/0:7,0:9:21.07:0,21,691	0/0:14,0:16:31.35:0,31,1021	0/0:19,0:23:64.46:0,64,2002	0/0:10,0:11:18.06:0,18,637	0/0:8,0:9:24.08:0,24,838	0/0:12,0:12:26.93:0,27,795
chr10	10494761	.	TTGC	T	779.19	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-0.681;DP=379;FS=20.690;HRun=0;HaplotypeScore=96.7261;InbreedingCoeff=0.6579;MQ=47.43;MQ0=10;MQRankSum=-2.411;QD=10.53;ReadPosRankSum=-1.539;VQSLOD=1.5453;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:10:5.68:0,6,62	0/0:6,0:5:5.75:0,6,32	0/0:14,0:9:18.02:0,18,207	0/0:10,0:3:5.94:0,6,41	0/0:18,0:18:21.07:0,21,387	0/0:11,0:12:9.01:0,9,91	0/0:27,0:30:47.72:0,48,483	1/1:22,3:24:47.59:407,48,0	0/0:8,0:13:6.02:0,6,78	0/0:15,0:15:13.22:0,13,111	0/0:6,0:5:3:0,3,25	0/0:17,0:17:21.21:0,21,149	0/0:11,0:11:13.03:0,13,71	0/0:10,0:9:7.15:0,7,78	0/0:17,0:17:28.21:0,28,220	0/0:13,0:13:12.01:0,12,138	0/0:13,0:11:14.91:0,15,151	0/0:9,0:9:11.95:0,12,107	1/1:16,4:18:28.82:273,29,0	1/1:7,3:9:9.03:128,9,0	1/1:14,5:19:11.88:120,12,0	0/0:11,0:12:2.97:0,3,25	0/0:11,0:11:2.92:0,3,17	0/0:16,0:16:8.38:0,8,69	0/0:15,0:15:18.03:0,18,293	0/0:9,0:9:7.20:0,7,60	0/0:10,0:9:14.42:0,14,110	0/0:6,0:6:11.85:0,12,78
chr10	10494762	.	T	TGCT	1965.38	PASS	AB=1.000;AC=39;AF=0.696;AN=56;BaseQRankSum=0.754;DP=374;FS=11.872;HRun=0;HaplotypeScore=111.7863;InbreedingCoeff=0.7001;MQ=47.55;MQ0=8;MQRankSum=-2.716;QD=8.09;ReadPosRankSum=2.703;VQSLOD=2.3492;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:10:8.88:61,9,0	1/1:5,0:5:0.99:33,1,0	0/0:15,0:9:17.94:0,18,167	0/0:11,0:3:2.99:0,3,24	0/0:18,0:18:21.07:0,21,291	1/1:11,0:11:12.03:164,12,0	1/1:30,0:30:45.05:419,45,0	0/0:25,0:24:43.67:0,44,301	1/1:13,0:13:11.53:140,12,0	1/1:9,4:14:12.82:106,13,0	1/1:5,0:4:3:25,3,0	1/1:17,0:17:23.91:226,24,0	1/1:11,0:11:17.78:130,18,0	0/1:10,0:9:0.20:46,0,0	1/1:18,0:18:29.30:200,29,0	1/1:13,0:13:8.96:75,9,0	1/1:13,0:11:14.88:135,15,0	1/1:9,0:9:11.90:85,12,0	0/0:20,0:18:26.09:0,26,163	0/0:9,0:9:8.93:0,9,63	0/0:18,0:18:11.62:0,12,70	1/1:12,0:12:5.99:48,6,0	1/1:10,0:11:2.92:17,3,0	1/1:16,0:16:3.01:38,3,0	0/0:15,0:15:18.01:0,18,185	1/1:9,0:9:3.71:34,4,0	1/1:9,0:8:8.86:74,9,0	1/1:6,0:6:9.87:98,10,0
chr10	10497562	.	CTCTT	C	4309.47	PASS	AB=0.701;AC=16;AF=0.286;AN=56;BaseQRankSum=-6.574;DP=401;FS=47.111;HRun=0;HaplotypeScore=100.2725;InbreedingCoeff=-0.4012;MQ=69.24;MQ0=1;MQRankSum=-10.818;QD=20.52;ReadPosRankSum=5.002;VQSLOD=2.6827;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:6,7:13:26.72:265,0,27	0/1:3,5:8:69.29:218,0,69	0/0:8,0:7:18.06:0,18,397	0/0:12,0:11:24.08:0,24,526	0/0:13,0:13:39.13:0,39,981	0/0:15,0:15:45.15:0,45,1247	0/0:18,0:18:54.19:0,54,1467	0/0:37,0:37:99:0,111,2920	0/0:15,0:15:45.15:0,45,1175	0/1:13,11:24:99:640,0,389	0/1:10,3:12:89.13:89,0,293	0/1:11,8:19:99:427,0,294	0/1:6,4:10:99:168,0,215	0/1:9,3:12:99:194,0,280	0/1:8,4:12:99:188,0,173	0/1:4,3:7:99:158,0,139	0/1:10,6:16:99:257,0,259	0/1:4,9:13:71.21:365,0,71	0/0:13,0:13:35.99:0,36,833	0/0:9,0:9:27.09:0,27,723	0/0:23,0:23:66.23:0,66,1674	0/1:4,4:8:99:208,0,113	0/1:2,2:4:88.37:107,0,88	0/0:7,3:10:16.88:0,17,224	0/0:18,0:18:54.16:0,54,1372	0/1:9,6:15:99:315,0,285	0/1:15,8:21:99:418,0,369	0/1:7,6:13:99:290,0,265
chr10	10497723	.	G	GGA	15165.89	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-14.465;DP=519;FS=14.865;HRun=0;HaplotypeScore=53.3451;InbreedingCoeff=0.9966;MQ=80.88;MQ0=0;MQRankSum=-2.622;QD=48.61;ReadPosRankSum=6.529;VQSLOD=4.6927;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,41:41:87.30:1697,87,0	1/1:0,7:7:21.07:409,21,0	0/0:19,0:19:54.08:0,54,752	0/0:17,0:17:48.07:0,48,676	0/0:10,0:10:30.10:0,30,458	0/0:7,0:7:21.07:0,21,321	0/0:20,0:20:57.17:0,57,820	0/0:24,0:24:72.05:0,72,950	0/0:24,0:24:66.20:0,66,965	1/1:0,14:15:48.15:888,48,0	1/1:0,12:12:32.98:566,33,0	1/1:0,17:17:45.15:876,45,0	1/1:0,20:22:60.21:1144,60,0	1/1:0,16:16:45.15:878,45,0	1/1:0,20:20:51.17:996,51,0	1/1:0,27:27:69.24:1353,69,0	1/1:0,33:34:78.27:1527,78,0	1/1:0,23:24:63.22:1235,63,0	0/0:13,0:13:35.88:0,36,398	0/0:6,0:6:18.06:0,18,275	0/0:45,0:45:99:0,132,1884	1/1:0,12:12:36.06:660,36,0	1/1:1,10:12:29.94:573,30,0	1/1:0,22:22:39.13:765,39,0	0/0:22,0:22:66.21:0,66,980	1/1:0,14:14:39.12:732,39,0	1/1:0,8:9:24.08:467,24,0	1/1:0,7:7:21.07:401,21,0
chr10	10499800	.	A	ACG	15504.83	PASS	AB=1.000;AC=38;AF=0.679;AN=56;BaseQRankSum=-9.484;DP=883;FS=6.823;HRun=0;HaplotypeScore=94.7114;InbreedingCoeff=0.6564;MQ=58.42;MQ0=26;MQRankSum=1.911;QD=23.53;ReadPosRankSum=6.404;VQSLOD=5.1870;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,50:53:62.86:1603,63,0	1/1:1,10:11:21.07:367,21,0	0/0:37,0:6:14.93:0,15,149	0/0:32,0:7:14.02:0,14,120	0/0:14,0:14:32.97:0,33,392	0/0:22,0:22:63.09:0,63,738	0/0:56,0:56:99:0,153,1768	0/1:33,0:33:99:176,0,287	0/0:43,0:42:99:0,111,1350	1/1:1,26:27:65.88:1010,66,0	1/1:9,5:14:12.23:315,12,0	1/1:8,37:45:68.24:1144,68,0	1/1:3,26:28:33.24:816,33,0	1/1:5,32:36:39.57:1066,40,0	1/1:2,18:21:21.54:371,22,0	1/1:1,25:28:23.33:620,23,0	1/1:2,37:38:54.18:936,54,0	1/1:2,38:40:27.66:922,28,0	0/1:23,0:21:99:125,0,136	0/1:15,0:15:64.69:132,0,65	0/1:75,0:74:99:756,0,296	1/1:2,21:23:32.90:582,33,0	1/1:4,13:17:12.23:506,12,0	1/1:6,50:56:84.54:1682,85,0	0/0:18,0:18:48.13:0,48,625	1/1:2,22:25:49.62:909,50,0	1/1:5,20:24:45.14:730,45,0	1/1:1,16:18:42.14:736,42,0
chr10	10499804	.	G	GCA	10603.01	PASS	AB=0.961;AC=30;AF=0.536;AN=56;BaseQRankSum=5.159;DP=893;FS=12.264;HRun=0;HaplotypeScore=111.1522;InbreedingCoeff=0.1355;MQ=58.58;MQ0=26;MQRankSum=0.431;QD=15.80;ReadPosRankSum=6.201;VQSLOD=4.0774;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:54,0:53:23.95:815,0,24	1/1:10,0:10:21.04:222,21,0	0/0:41,0:11:10.85:0,11,116	0/0:35,0:8:10.98:0,11,91	0/0:13,0:14:30.05:0,30,345	0/0:20,0:21:47.81:0,48,534	0/0:55,0:55:99:0,106,1313	1/1:20,15:36:19.61:688,20,0	0/0:39,0:39:96.03:0,96,1102	0/1:30,0:30:28.60:495,0,29	0/1:15,0:15:59.14:152,0,59	1/1:40,0:41:15.54:602,16,0	0/1:30,0:29:5.92:444,0,6	0/1:37,0:36:41.73:589,0,42	0/1:21,0:21:21.81:183,0,22	0/1:30,0:30:38.56:321,0,39	1/1:37,0:36:37.14:514,37,0	0/1:39,0:39:12.25:469,0,12	1/1:12,10:22:39.04:499,39,0	1/1:5,11:17:4.29:341,4,0	0/1:15,62:78:99:1692,0,151	0/1:25,0:23:6.47:295,0,6	0/1:17,0:17:53.76:255,0,54	1/1:55,0:54:26.70:865,27,0	0/0:16,0:16:45.14:0,45,542	0/1:28,0:28:44.56:372,0,45	1/1:25,0:24:21.17:382,21,0	1/1:20,0:20:42.07:410,42,0
chr10	10502234	.	G	GGAA	7778.93	PASS	AB=1.000;AC=35;AF=0.625;AN=56;BaseQRankSum=3.260;DP=622;FS=0.000;HRun=0;HaplotypeScore=119.8901;InbreedingCoeff=0.8908;MQ=57.97;MQ0=7;MQRankSum=1.505;QD=18.13;ReadPosRankSum=6.855;VQSLOD=4.3692;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:34,4:38:56.84:851,57,0	1/1:4,0:4:11.94:108,12,0	0/0:10,0:6:15.05:0,15,218	0/0:3,0:1:2.88:0,3,15	0/0:23,0:22:60.07:0,60,851	0/0:14,0:14:17.80:0,18,129	0/0:22,0:23:12.29:0,12,108	0/0:24,0:22:41.76:0,42,254	0/1:17,0:17:9.99:10,0,58	1/1:26,0:25:59.79:520,60,0	1/1:16,1:17:32.36:275,32,0	1/1:23,1:24:44.07:412,44,0	1/1:26,0:26:44.25:360,44,0	1/1:21,0:21:35.61:302,36,0	1/1:23,1:24:58.67:534,59,0	1/1:13,2:14:27.26:370,27,0	1/1:48,2:50:99:1045,121,0	1/1:29,0:29:64.02:562,64,0	0/0:18,0:17:36.84:0,37,370	0/0:28,0:27:52.86:0,53,369	0/0:21,0:21:50.56:0,51,479	1/1:29,3:31:47.23:513,47,0	1/1:18,0:18:38.10:313,38,0	1/1:33,0:33:68.94:601,69,0	0/0:29,0:29:77.94:0,78,983	1/1:21,0:21:50.46:437,50,0	1/1:14,1:14:17.84:195,18,0	1/1:18,1:18:43.24:370,43,0
chr10	10502235	.	G	GAA	8066.42	PASS	AB=0.650;AC=45;AF=0.804;AN=56;BaseQRankSum=0.823;DP=632;FS=5.340;HRun=13;HaplotypeScore=108.4766;InbreedingCoeff=0.5782;MQ=58.21;MQ0=5;MQRankSum=-0.673;QD=14.23;ReadPosRankSum=4.689;VQSLOD=3.8819;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:38,0:38:13.74:642,14,0	1/1:4,0:4:8.95:67,9,0	0/0:9,0:6:14.62:0,15,106	0/0:3,0:1:1.25:0,1,3	0/0:24,0:23:50.77:0,51,428	1/1:5,5:13:14.02:140,14,0	0/1:8,15:26:2.17:326,0,2	1/1:8,2:23:37.90:238,38,0	1/1:6,13:20:18.04:223,18,0	1/1:24,1:25:41.58:337,42,0	1/1:17,0:17:17.45:192,17,0	1/1:22,2:24:44.95:408,45,0	1/1:25,2:27:38.22:429,38,0	1/1:22,0:22:29.50:313,30,0	1/1:23,1:24:55.65:488,56,0	1/1:15,0:14:9.51:242,10,0	1/1:48,2:50:99:967,102,0	1/1:26,2:29:68.35:621,68,0	0/1:10,1:19:77.80:133,0,78	1/1:16,0:27:10.51:114,11,0	0/1:9,1:23:69.68:70,0,89	1/1:31,0:30:7.39:298,7,0	1/1:18,0:18:30.14:282,30,0	1/1:33,1:34:69.01:650,69,0	0/0:26,0:28:50.25:0,50,474	1/1:20,1:22:32.15:275,32,0	1/1:15,0:14:18:161,18,0	1/1:18,1:18:45.05:451,45,0
chr10	10502236	.	A	AAG	13076.22	PASS	AB=1.000;AC=37;AF=0.661;AN=56;BaseQRankSum=-7.053;DP=662;FS=3.191;HRun=0;HaplotypeScore=105.1306;InbreedingCoeff=0.7249;MQ=58.90;MQ0=5;MQRankSum=0.258;QD=26.26;ReadPosRankSum=7.120;VQSLOD=5.5068;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,30:38:72.96:1277,73,0	1/1:0,5:5:11.95:152,12,0	0/0:11,0:7:15.03:0,15,178	0/0:3,0:1:3:0,3,25	0/0:24,0:23:63.07:0,63,826	0/1:14,0:14:15.26:15,0,93	0/1:28,0:28:76.74:77,0,102	0/0:23,0:23:23.37:0,23,201	0/1:20,0:20:46.19:54,0,46	1/1:6,21:28:62.74:772,63,0	1/1:3,13:18:32.72:383,33,0	1/1:5,20:25:44.32:687,44,0	1/1:6,19:26:23.79:647,24,0	1/1:2,21:24:38.82:583,39,0	1/1:5,19:25:60.02:903,60,0	1/1:5,10:14:32.60:515,33,0	1/1:10,41:51:99:1777,123,0	1/1:7,24:31:67.40:1043,67,0	0/0:22,0:21:22.26:0,22,334	0/0:27,0:26:59.23:0,59,373	0/0:25,0:25:38.49:0,38,407	1/1:9,19:27:55.61:697,56,0	1/1:3,16:19:41.73:579,42,0	1/1:4,31:36:72.22:1138,72,0	0/0:29,0:29:77.86:0,78,1003	1/1:6,18:27:68.79:826,69,0	1/1:5,13:18:17.73:275,18,0	1/1:5,16:20:27:675,27,0
chr10	10502237	.	A	AG	5130.24	PASS	AB=0.926;AC=33;AF=0.589;AN=56;BaseQRankSum=6.090;DP=655;FS=0.753;HRun=0;HaplotypeScore=116.9330;InbreedingCoeff=0.8894;MQ=59.52;MQ0=5;MQRankSum=-0.034;QD=11.88;ReadPosRankSum=10.009;VQSLOD=4.7745;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:39,0:39:82.08:507,82,0	1/1:5,0:5:11.75:71,12,0	0/0:12,0:8:18.04:0,18,207	0/0:3,0:1:2.90:0,3,16	0/0:24,0:23:66.08:0,66,815	0/0:13,0:13:22.90:0,23,166	0/0:26,0:26:43.78:0,44,289	0/0:22,0:22:21.99:0,22,172	0/0:20,0:20:27.35:0,27,169	1/1:26,0:26:30.62:332,31,0	1/1:15,1:16:32.14:211,32,0	1/1:27,0:27:15.55:220,16,0	0/1:23,2:25:1.14:220,0,1	1/1:24,1:25:36.93:242,37,0	1/1:24,1:25:32.99:338,33,0	1/1:15,0:14:35.04:218,35,0	1/1:50,3:53:80.47:733,80,0	1/1:30,0:30:26.53:362,27,0	0/0:22,0:21:36.49:0,36,345	0/0:26,0:25:11.70:0,12,204	0/0:26,0:26:29.17:0,29,320	1/1:21,3:23:52.39:394,52,0	1/1:16,2:18:41.15:290,41,0	1/1:36,0:36:46.57:383,47,0	0/0:29,0:29:77.52:0,78,934	1/1:27,1:28:2.34:282,2,0	1/1:18,0:17:17.19:108,17,0	1/1:20,2:21:17.74:219,18,0
chr10	10503899	.	T	TC	8727.37	PASS	AB=1.000;AC=53;AF=0.981;AN=54;BaseQRankSum=-1.715;DP=222;FS=0.000;HRun=2;HaplotypeScore=100.5904;InbreedingCoeff=-0.0292;MQ=54.18;MQ0=0;MQRankSum=-1.698;QD=39.31;ReadPosRankSum=1.094;VQSLOD=4.7087;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,15:15:42.14:627,42,0	1/1:0,11:11:33.11:494,33,0	1/1:1,2:3:6.02:90,6,0	0/1:4,0:4:19.46:19,0,31	1/1:1,5:6:15.05:224,15,0	1/1:1,3:4:9.03:135,9,0	1/1:0,9:9:27.09:404,27,0	1/1:0,10:10:30.10:448,30,0	1/1:0,8:8:24.08:359,24,0	1/1:1,9:10:30.10:437,30,0	1/1:0,8:8:24.08:358,24,0	1/1:0,1:1:3.01:45,3,0	1/1:0,9:9:27.09:403,27,0	1/1:1,12:13:39.09:558,39,0	1/1:0,5:5:15.05:224,15,0	1/1:2,7:9:21.07:314,21,0	1/1:2,5:7:15.04:204,15,0	1/1:1,9:10:24.05:335,24,0	1/1:3,3:6:15.04:207,15,0	1/1:0,9:9:27.09:404,27,0	1/1:2,5:7:18.05:249,18,0	1/1:3,14:17:45.12:649,45,0	1/1:1,10:11:33.10:472,33,0	1/1:1,6:7:5.76:89,6,0	1/1:1,4:5:12.04:179,12,0	1/1:1,7:8:24.08:350,24,0	1/1:0,10:10:30.10:449,30,0	./.
chr10	10503924	.	TG	T	5704.17	PASS	AC=50;AF=1.000;AN=50;DP=161;FS=0.000;HRun=2;HaplotypeScore=91.0994;InbreedingCoeff=-0.0295;MQ=29.00;MQ0=0;QD=35.43;VQSLOD=4.7901;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,10:10:24.04:292,24,0	1/1:0,10:10:30.10:388,30,0	./.	./.	1/1:0,4:4:12.04:155,12,0	1/1:0,1:1:3.01:39,3,0	1/1:0,5:5:15.05:194,15,0	1/1:0,10:10:30.10:389,30,0	1/1:0,8:8:24.08:310,24,0	1/1:1,7:8:21.07:272,21,0	1/1:0,8:8:24.08:310,24,0	1/1:0,1:1:3.01:39,3,0	1/1:1,6:7:18.06:233,18,0	1/1:0,11:11:33.11:422,33,0	1/1:1,4:5:15.01:176,15,0	1/1:0,3:3:9.03:116,9,0	1/1:0,4:4:9.03:116,9,0	1/1:1,6:7:18.02:214,18,0	1/1:0,2:2:6.02:77,6,0	1/1:0,8:8:24.04:291,24,0	1/1:0,3:3:9.03:116,9,0	1/1:0,13:13:39.13:504,39,0	1/1:0,10:10:30.10:388,30,0	1/1:1,3:4:2.97:20,3,0	1/1:0,4:4:12.04:155,12,0	1/1:0,6:6:18.06:233,18,0	1/1:2,7:9:21.04:255,21,0	./.
chr10	10504654	.	GAGA	G	3708.52	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=10.494;DP=646;FS=4.882;HRun=0;HaplotypeScore=95.9928;InbreedingCoeff=0.9993;MQ=74.18;MQ0=2;MQRankSum=-4.428;QD=41.67;ReadPosRankSum=0.689;VQSLOD=5.1350;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,111,2516	0/0:8,0:8:24.08:0,24,517	0/0:45,0:39:89.60:0,90,1998	0/0:42,0:33:74.22:0,74,1569	0/0:31,0:30:93.32:0,93,2144	0/0:20,0:20:60.19:0,60,1173	0/0:27,0:27:75.26:0,75,1697	1/1:1,22:23:66.17:1059,66,0	0/0:25,0:25:72.25:0,72,1660	0/0:25,0:25:75.26:0,75,1657	0/0:17,0:17:51.18:0,51,1156	0/0:26,0:26:78.27:0,78,1745	0/0:21,0:21:60.20:0,60,1296	0/0:23,0:23:66.22:0,66,1449	0/0:20,0:20:60.21:0,60,1363	0/0:11,0:11:33.11:0,33,745	0/0:24,0:24:72.25:0,72,1591	0/0:22,0:22:63.19:0,63,1337	1/1:0,14:12:36.10:583,36,0	1/1:1,25:26:66.02:1124,66,0	1/1:1,25:26:57.04:942,57,0	0/0:18,0:18:54.17:0,54,1184	0/0:15,0:15:45.15:0,45,1038	0/0:17,0:17:48.15:0,48,1062	0/0:16,0:16:45.14:0,45,954	0/0:28,0:28:84.29:0,84,1919	0/0:26,0:26:78.27:0,78,1750	0/0:12,0:12:36.12:0,36,830
chr10	10505180	.	GGAAAC	G	2258.58	PASS	AB=0.998;AC=26;AF=0.464;AN=56;BaseQRankSum=9.838;DP=553;FS=7.982;HRun=0;HaplotypeScore=109.4897;InbreedingCoeff=0.4233;MQ=52.87;MQ0=25;MQRankSum=-9.035;QD=8.37;ReadPosRankSum=0.294;VQSLOD=1.2267;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:23:9.22:0,9,48	1/1:5,0:5:3.01:38,3,0	0/1:58,0:13:32.91:33,0,466	0/0:81,0:23:39.52:0,40,837	0/0:12,0:12:36.12:0,36,917	0/0:17,0:17:46.37:0,46,1337	0/0:25,0:25:72.25:0,72,2028	0/0:24,0:24:69.21:0,69,1899	0/0:24,0:24:65.17:0,65,1717	1/1:18,0:16:16.97:488,17,0	1/1:14,0:13:3.14:118,3,0	1/1:11,0:11:18.02:216,18,0	0/1:9,0:9:7.92:119,0,8	1/1:10,0:8:18.53:265,19,0	0/1:9,0:9:12.85:92,0,13	0/1:23,0:21:19.94:173,0,20	0/1:13,0:13:28.72:71,0,29	1/1:0,8:8:3.01:68,3,0	0/0:23,0:22:66.21:0,66,1685	0/0:20,0:20:55.05:0,55,1419	0/0:18,0:18:36.12:0,36,958	1/1:13,0:12:8.37:139,8,0	0/1:14,0:14:0.42:0,0,0	0/1:19,0:20:3.24:126,0,3	0/0:15,0:15:40.45:0,40,1099	1/1:11,0:11:17.11:186,17,0	0/1:20,0:18:7.93:119,0,8	1/1:12,0:10:16.85:196,17,0
chr10	10505181	.	GAAACAGA	G	4103.49	PASS	AB=0.742;AC=32;AF=0.571;AN=56;BaseQRankSum=7.743;DP=534;FS=12.816;HRun=0;HaplotypeScore=111.1516;InbreedingCoeff=0.7612;MQ=53.35;MQ0=25;MQRankSum=-9.154;QD=16.03;ReadPosRankSum=-0.910;VQSLOD=1.8506;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:1,17:19:1.80:0,2,5	1/1:0,5:5:3.01:61,3,0	0/1:57,0:13:15.77:16,0,481	0/0:80,0:23:24.70:0,25,736	0/0:12,0:12:36.12:0,36,1003	0/0:17,0:17:51.14:0,51,1448	0/0:25,0:25:72.25:0,72,2075	0/0:25,0:25:69.24:0,69,1989	0/0:24,0:24:66.09:0,66,1998	1/1:0,0:15:35.99:721,36,0	1/1:1,0:13:5.91:193,6,0	1/1:3,7:11:17.42:344,17,0	1/1:0,0:8:9.03:191,9,0	1/1:3,0:8:21.03:432,21,0	1/1:0,7:7:8.90:224,9,0	1/1:2,18:19:17.40:382,17,0	1/1:1,9:10:4.03:142,4,0	1/1:8,0:8:3.01:48,3,0	0/0:23,0:22:63.13:0,63,1558	0/0:19,0:19:49.03:0,49,1341	0/0:17,0:17:36.12:0,36,1034	1/1:1,0:12:14.19:220,14,0	0/1:0,0:13:0.41:1,0,0	1/1:4,12:18:14.94:251,15,0	0/0:15,0:15:43.02:0,43,1036	1/1:1,10:11:26.90:363,27,0	1/1:3,16:17:9.03:194,9,0	1/1:1,0:10:18.06:320,18,0
chr10	10505185	.	C	CAG	185.60	PASS	AB=0.931;AC=29;AF=0.604;AN=48;BaseQRankSum=4.394;DP=550;FS=15.655;HRun=0;HaplotypeScore=114.0885;InbreedingCoeff=0.4024;MQ=52.56;MQ0=25;MQRankSum=-3.495;QD=0.72;ReadPosRankSum=-0.650;VQSLOD=1.4302;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:6,0:6:0.78:0,1,2	./.	0/0:78,0:21:0:0,0,0	0/0:14,0:14:14.69:0,15,159	0/0:21,0:21:20.87:0,21,199	0/0:24,0:24:21.94:0,22,227	1/1:26,0:26:1.25:3,1,0	0/0:24,0:24:35.21:0,35,317	1/1:18,0:16:2.97:20,3,0	0/0:14,0:12:0.30:0,0,1	0/1:11,0:11:0.71:1,0,3	1/1:10,0:9:2.95:19,3,0	1/1:12,0:10:2.94:18,3,0	1/1:8,0:8:8.65:46,9,0	0/1:22,0:20:0.89:1,0,2	1/1:10,0:10:1.19:9,1,0	./.	1/1:18,0:17:3.01:42,3,0	1/1:16,1:19:3:26,3,0	0/1:14,4:19:35.34:35,0,44	./.	1/1:20,0:20:0.89:3,1,0	1/1:19,0:19:4.73:37,5,0	0/0:12,0:15:8.52:0,9,42	1/1:11,0:11:1.47:11,1,0	1/1:20,0:18:2.02:19,2,0	1/1:15,0:12:7:29,7,0
chr10	10508838	.	G	GT	494.41	PASS	AB=0.851;AC=17;AF=0.304;AN=56;BaseQRankSum=7.060;DP=564;FS=11.423;HRun=0;HaplotypeScore=119.5089;InbreedingCoeff=-0.4406;MQ=64.06;MQ0=31;MQRankSum=1.230;QD=1.72;ReadPosRankSum=2.935;VQSLOD=1.9939;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:22,3:24:58.31:81,0,58	0/1:9,0:9:7.58:8,0,62	0/0:54,0:20:51.03:0,51,645	0/0:68,0:20:17.23:0,17,362	0/0:23,0:23:60.05:0,60,791	0/0:7,0:7:5.14:0,5,31	0/0:20,0:20:0.95:0,1,120	0/1:22,1:22:18.73:19,0,167	0/1:18,2:20:3.81:4,0,85	0/1:14,4:18:11.21:11,0,110	0/0:12,2:14:8.02:0,8,126	0/0:9,0:9:11.56:0,12,67	0/1:13,2:15:24.89:25,0,82	0/1:9,1:9:4.16:4,0,62	0/0:14,1:13:5.37:0,5,79	0/1:9,3:11:43.92:46,0,44	0/1:20,7:27:84.39:84,0,195	0/1:10,4:13:27.63:28,0,102	0/0:20,0:16:34.23:0,34,165	0/1:12,5:17:37.12:37,0,107	0/0:27,1:25:4.48:0,4,155	0/1:13,3:16:45.81:46,0,61	0/1:11,3:14:31.81:32,0,54	0/1:18,10:28:87.56:88,0,101	0/0:16,0:16:38.47:0,38,471	0/1:13,5:18:64.29:94,0,64	0/1:12,2:14:35.30:35,0,93	0/1:7,1:7:0.86:1,0,73
chr10	10508839	.	G	GT	698.32	PASS	AB=0.846;AC=17;AF=0.304;AN=56;BaseQRankSum=10.847;DP=575;FS=17.579;HRun=0;HaplotypeScore=124.9586;InbreedingCoeff=-0.4526;MQ=61.47;MQ0=31;MQRankSum=-1.844;QD=2.29;ReadPosRankSum=1.828;VQSLOD=1.7582;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:24,3:26:51.04:81,0,51	0/0:8,0:8:14.14:0,14,72	0/0:52,0:19:48.07:0,48,585	0/0:70,0:19:1.97:0,2,317	0/0:22,0:23:55.03:0,55,758	0/0:7,0:7:4.99:0,5,29	0/0:22,0:22:25.30:0,25,145	0/1:25,1:25:36.97:37,0,175	0/1:19,0:21:51.20:51,0,64	0/1:13,4:18:18.32:18,0,84	0/0:12,2:14:7.58:0,8,114	0/0:8,0:8:11.47:0,11,62	0/1:11,2:13:25.86:26,0,74	0/1:13,1:13:34.86:35,0,55	0/1:13,1:12:17.60:18,0,68	0/1:9,3:11:43.28:43,0,47	0/1:20,7:27:82.49:82,0,173	0/1:9,5:13:35.38:35,0,77	0/0:21,0:17:17.10:0,17,176	0/1:13,5:18:38.15:38,0,94	0/0:26,1:24:25.58:0,26,164	0/1:14,3:17:44.71:93,0,45	0/1:12,3:15:32.28:32,0,48	0/1:18,10:28:87.79:91,0,88	0/0:14,0:16:17.51:0,18,429	0/1:13,5:18:68.52:137,0,69	0/1:13,2:15:32.92:33,0,85	0/1:7,1:7:1.12:1,0,64
chr10	10509031	.	T	TC	3689.89	PASS	AB=1.000;AC=39;AF=0.813;AN=48;BaseQRankSum=0.995;DP=419;FS=2.461;HRun=8;HaplotypeScore=69.1604;InbreedingCoeff=0.8481;MQ=57.49;MQ0=0;MQRankSum=0.210;QD=11.18;ReadPosRankSum=-0.967;VQSLOD=2.4958;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:22:33.41:174,33,0	./.	0/0:15,0:14:14.48:0,14,231	0/0:17,0:17:22.21:0,22,299	0/0:14,0:14:38.97:0,39,343	1/1:3,0:11:11.36:58,11,0	1/1:5,2:38:65.97:385,66,0	1/1:12,7:17:17.96:171,18,0	1/1:3,1:18:31.45:179,31,0	1/1:2,0:8:8.83:57,9,0	./.	1/1:12,0:13:23.18:118,23,0	1/1:10,0:10:11.36:60,11,0	1/1:10,0:10:10.17:46,10,0	1/1:14,0:15:21.60:111,22,0	./.	1/1:13,0:13:22.46:104,22,0	1/1:10,0:10:18.83:86,19,0	1/1:1,14:16:38.91:406,39,0	1/1:4,9:13:18.05:208,18,0	1/1:6,46:52:99:1212,105,0	./.	0/1:6,0:6:0:0,0,0	1/1:12,0:11:7.87:33,8,0	0/0:18,0:18:44.80:0,45,407	1/1:17,0:17:14.24:89,14,0	1/1:15,0:18:29.52:157,30,0	1/1:7,0:7:5.49:35,5,0
chr10	10509039	.	CATT	C	2624.21	PASS	AB=0.976;AC=13;AF=0.241;AN=54;BaseQRankSum=-4.259;DP=437;FS=168.911;HRun=0;HaplotypeScore=79.0810;InbreedingCoeff=-0.3385;MQ=55.49;MQ0=0;MQRankSum=2.845;QD=13.81;ReadPosRankSum=-5.220;VQSLOD=0.2841;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:21,1:20:99:492,0,326	./.	0/0:18,0:16:48.16:0,48,985	0/0:19,0:18:21.67:0,22,815	0/0:16,0:16:48.16:0,48,1041	0/0:9,0:9:18.05:0,18,231	0/0:32,0:32:4.20:0,4,754	0/1:16,0:14:51.50:51,0,525	0/0:18,0:18:45.11:0,45,633	0/1:10,0:10:33.55:34,0,437	0/0:4,0:4:8.99:0,9,124	0/1:17,0:17:99:218,0,394	0/1:9,0:9:99:159,0,194	0/1:13,0:13:99:170,0,487	0/1:14,0:13:99:299,0,184	0/0:9,0:8:9.03:0,9,154	0/1:20,0:18:99:345,0,425	0/1:15,0:14:99:312,0,411	0/0:20,0:19:31.43:0,31,765	0/0:10,0:10:19.92:0,20,343	0/0:53,0:53:99:0,126,1915	0/0:6,6:12:18.53:0,19,418	0/0:4,3:7:9.03:0,9,198	0/1:14,0:14:99:126,0,336	0/0:19,0:19:57.20:0,57,1262	0/1:12,7:19:99:189,0,495	0/1:17,0:17:99:309,0,313	0/1:4,0:4:52.18:71,0,52
chr10	10511432	.	TAA	T	3027.09	PASS	AB=0.606;AC=46;AF=0.821;AN=56;BaseQRankSum=3.076;DP=508;FS=2.232;HRun=12;HaplotypeScore=93.7220;InbreedingCoeff=0.6021;MQ=72.96;MQ0=12;MQRankSum=-4.387;QD=9.12;ReadPosRankSum=3.416;VQSLOD=1.8642;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:33,0:34:32.79:255,33,0	1/1:4,0:4:9:83,9,0	0/0:73,1:20:21.71:0,22,223	0/0:67,0:29:36:0,36,306	0/0:18,0:18:12.94:0,13,482	1/1:5,0:5:2.96:30,3,0	0/1:4,9:13:17.98:99,0,18	1/1:9,1:10:8.89:67,9,0	0/1:7,11:18:24.68:134,0,25	1/1:13,0:13:20.61:160,21,0	1/1:16,0:16:14.64:116,15,0	1/1:15,0:15:14.84:116,15,0	1/1:11,0:11:17.89:137,18,0	1/1:7,1:8:11.91:88,12,0	1/1:19,0:19:38.60:297,39,0	1/1:16,0:16:23.90:187,24,0	1/1:19,0:19:17.90:146,18,0	1/1:15,2:17:26.64:218,27,0	1/1:18,0:18:17.89:162,18,0	1/1:7,0:7:5.90:53,6,0	1/1:12,0:12:5.96:47,6,0	1/1:11,0:11:8.77:61,9,0	1/1:14,0:14:11.48:87,11,0	1/1:16,0:16:22.98:184,23,0	0/0:16,0:16:48.11:0,48,642	1/1:17,0:17:41.32:330,41,0	1/1:10,0:10:11.94:94,12,0	1/1:9,0:9:5.98:47,6,0
chr10	10511441	.	AAAAG	A	3661.37	PASS	AB=1.000;AC=33;AF=0.589;AN=56;BaseQRankSum=5.542;DP=535;FS=4.154;HRun=0;HaplotypeScore=104.5931;InbreedingCoeff=0.2456;MQ=74.97;MQ0=14;MQRankSum=-5.278;QD=12.12;ReadPosRankSum=9.557;VQSLOD=1.9567;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:31,0:31:16.21:358,16,0	1/1:4,0:4:8.40:56,8,0	0/0:88,0:26:50.23:0,50,571	0/0:80,0:33:29.48:0,29,501	0/0:17,0:17:43.16:0,43,789	0/0:9,0:9:15.61:0,16,157	0/1:14,0:14:5.97:6,0,183	0/1:7,0:7:28.20:28,0,62	0/0:21,0:21:34.66:0,35,412	1/1:14,0:14:33.09:262,33,0	0/1:17,0:17:28.74:197,0,29	1/1:16,0:16:17.81:187,18,0	1/1:9,2:11:18.03:216,18,0	1/1:9,1:10:12.01:132,12,0	1/1:18,0:18:41.77:434,42,0	1/1:15,0:15:24.06:265,24,0	0/1:16,0:16:4.26:126,0,4	0/1:17,0:17:3.92:223,0,4	0/1:14,0:14:36.16:51,0,36	0/1:7,0:7:13.37:42,0,13	0/1:14,0:14:12.91:34,0,13	0/1:10,0:10:11.24:117,0,11	0/1:16,0:16:11:114,0,11	1/1:15,0:15:25.02:249,25,0	0/0:18,0:18:54.16:0,54,970	1/1:18,1:19:48.07:409,48,0	1/1:8,0:8:12.01:138,12,0	0/1:9,0:9:7.08:18,0,7
chr10	10511442	.	AAAGG	A	6197.37	PASS	AB=0.655;AC=37;AF=0.661;AN=56;BaseQRankSum=2.976;DP=528;FS=16.451;HRun=0;HaplotypeScore=94.0939;InbreedingCoeff=0.4136;MQ=75.31;MQ0=14;MQRankSum=-5.746;QD=21.52;ReadPosRankSum=9.203;VQSLOD=2.4731;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,27:28:33.09:590,33,0	1/1:0,4:4:9.02:112,9,0	0/0:90,0:27:60.70:0,61,660	0/0:80,0:33:51.87:0,52,529	0/0:18,0:18:18.99:0,19,651	0/1:10,0:10:6.21:6,0,259	0/0:11,0:13:5:0,5,178	0/1:4,0:7:28.92:29,0,35	0/0:20,0:20:9.87:0,10,363	1/1:2,12:14:36.01:475,36,0	0/1:5,11:16:12.97:305,0,13	1/1:1,14:15:18.05:297,18,0	1/1:2,9:11:18.05:320,18,0	1/1:2,8:10:12.03:210,12,0	1/1:1,17:18:42.14:723,42,0	1/1:0,15:15:24.08:430,24,0	1/1:1,13:15:23.99:319,24,0	1/1:3,13:16:29.94:490,30,0	0/1:3,0:12:13.48:109,0,13	0/1:2,0:7:10.16:37,0,10	0/1:5,0:14:35.18:35,0,58	1/1:7,3:11:11.82:168,12,0	1/1:1,14:15:10.36:207,10,0	1/1:1,14:15:26.21:458,26,0	0/0:19,0:19:54.12:0,54,821	1/1:4,15:19:46.97:640,47,0	1/1:0,7:7:12.04:215,12,0	0/1:1,0:9:22.13:22,0,22
chr10	10511443	.	AAGG	A	3784.96	PASS	AB=0.968;AC=38;AF=0.679;AN=56;BaseQRankSum=4.379;DP=526;FS=23.093;HRun=0;HaplotypeScore=96.3676;InbreedingCoeff=0.5031;MQ=73.81;MQ0=14;MQRankSum=-5.488;QD=13.01;ReadPosRankSum=8.409;VQSLOD=0.8155;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:28:33.05:330,33,0	1/1:4,0:4:8.49:53,8,0	0/0:89,0:26:60.35:0,60,543	0/0:79,0:32:42.47:0,42,365	0/0:18,0:18:17.87:0,18,415	0/0:9,0:9:14.67:0,15,273	0/1:13,0:13:6.79:7,0,186	0/1:8,0:8:55.62:56,0,70	0/0:20,0:21:30.90:0,31,388	1/1:12,1:14:35.92:348,36,0	1/1:15,1:16:2.64:199,3,0	1/1:14,1:15:18.03:174,18,0	1/1:11,0:11:18.02:172,18,0	1/1:10,0:10:12.02:122,12,0	1/1:17,1:18:42.08:420,42,0	1/1:15,0:15:24.04:234,24,0	1/1:15,0:15:23.67:194,24,0	1/1:16,0:16:29.54:273,30,0	0/1:12,0:12:14.25:87,0,14	0/1:6,0:7:0.52:35,0,1	0/1:13,0:14:48.27:48,0,50	1/1:4,6:10:11.83:121,12,0	1/1:15,0:15:11.08:115,11,0	1/1:15,0:15:26.73:271,27,0	0/0:19,0:19:47.97:0,48,518	1/1:18,0:19:44.16:368,44,0	1/1:7,0:7:12.02:117,12,0	0/1:9,0:9:21.97:42,0,22
chr10	10514890	.	CCTTACCACTTGCCTTCCTGCTCCAGAA	C	719.30	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.357;DP=434;FS=0.000;HRun=0;HaplotypeScore=282.5437;InbreedingCoeff=0.9443;MQ=81.71;MQ0=0;MQRankSum=-3.361;QD=65.39;ReadPosRankSum=1.917;VQSLOD=2.0789;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:48.16:0,48,3530	0/0:6,0:6:18.06:0,18,2040	0/0:11,0:11:30.98:0,31,1360	0/0:14,0:13:36.12:0,36,2394	0/0:11,0:11:30.10:0,30,3219	0/0:14,0:14:42.11:0,42,4262	0/0:23,0:23:63.20:0,63,5996	0/0:16,0:16:48.16:0,48,3775	0/0:25,0:25:69.24:0,69,6858	0/0:19,0:19:57.20:0,57,5190	0/0:10,0:10:27.05:0,27,2095	0/0:17,0:17:51.18:0,51,5429	0/0:12,0:12:36.12:0,36,3519	0/0:19,0:19:57.20:0,57,6130	0/0:14,0:14:42.14:0,42,3488	0/0:9,0:9:24.08:0,24,2526	0/0:17,0:17:51.18:0,51,5222	0/0:15,0:15:45.15:0,45,4049	0/0:14,0:14:42.14:0,42,3228	0/0:18,0:18:54.17:0,54,4687	0/0:50,0:50:99:0,148,13950	0/0:6,0:6:18.06:0,18,1589	0/0:10,0:10:30.10:0,30,3489	0/0:16,0:16:45.15:0,45,4265	1/1:0,11:11:12.04:805,12,0	0/0:18,0:18:54.19:0,54,6034	0/0:14,0:14:42.13:0,42,3929	0/0:8,0:8:21.07:0,21,2249
chr10	10515394	.	A	ACCTGTAGCCCT	51890.78	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-6.849;DP=511;FS=16.117;HRun=0;HaplotypeScore=141.1587;InbreedingCoeff=0.9550;MQ=82.72;MQ0=0;MQRankSum=-13.711;QD=123.55;ReadPosRankSum=2.675;VQSLOD=4.8411;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,9:21:36.12:1947,36,0	1/1:3,4:8:24.04:964,24,0	0/0:20,0:20:48.12:0,48,1441	0/0:27,0:27:72.22:0,72,2102	0/0:19,0:19:54.14:0,54,1634	1/1:8,15:26:54.19:2905,54,0	1/1:9,8:20:48.16:2556,48,0	1/1:18,5:26:75.20:3381,75,0	1/1:8,10:20:48.16:2601,48,0	1/1:7,14:25:72.20:3442,72,0	1/1:3,9:12:33.11:1783,33,0	1/1:10,9:22:54.19:2666,54,0	1/1:6,12:21:54.15:2933,54,0	1/1:8,12:21:54.19:2785,54,0	1/1:9,12:23:51.18:2640,51,0	1/1:7,14:22:63.22:3369,63,0	1/1:5,5:14:27.09:1412,27,0	1/1:3,1:7:9.03:477,9,0	1/1:10,3:13:36.11:1353,36,0	1/1:6,9:16:42.14:2312,42,0	1/1:5,3:8:15.05:749,15,0	1/1:8,12:21:54.19:2870,54,0	1/1:7,9:17:36.12:1911,36,0	1/1:4,3:8:12.04:550,12,0	0/0:25,0:25:75.26:0,75,2536	1/1:5,12:20:51.15:2554,51,0	1/1:10,13:25:60.52:3219,61,0	1/1:0,3:3:9.03:512,9,0
chr10	10515463	.	C	CGTGTGTGTGTGTGT	11082.65	PASS	AB=0.854;AC=43;AF=0.796;AN=54;BaseQRankSum=-1.430;DP=516;FS=17.162;HRun=0;HaplotypeScore=235.5084;InbreedingCoeff=0.2882;MQ=51.45;MQ0=8;MQRankSum=-3.253;QD=26.02;ReadPosRankSum=-1.877;VQSLOD=2.1840;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,0:12:6.02:189,6,0	1/1:9,0:9:3.01:61,3,0	./.	0/0:22,0:7:9.03:0,9,252	0/0:26,0:27:39.07:0,39,1203	0/1:16,0:21:95.31:144,0,95	0/1:17,0:20:72.81:76,0,73	1/1:24,0:22:21.03:363,21,0	0/1:11,0:15:99:310,0,105	1/1:32,0:31:38.62:1419,39,0	1/1:21,0:21:3.01:142,3,0	1/1:24,1:26:23.90:918,24,0	1/1:14,0:14:9.03:496,9,0	1/1:17,0:17:12.04:572,12,0	1/1:11,3:15:20.30:1062,20,0	1/1:13,1:14:12.04:645,12,0	1/1:17,1:17:9.01:486,9,0	1/1:12,1:13:15.05:673,15,0	1/1:15,0:14:18.04:294,18,0	0/1:13,0:15:10.79:256,0,11	0/1:18,0:18:8.56:82,0,9	1/1:23,0:23:5.59:373,6,0	1/1:13,0:13:12.01:259,12,0	1/1:14,0:14:2.13:97,2,0	0/0:16,0:16:21.07:0,21,804	1/1:23,1:23:28.91:1024,29,0	1/1:20,0:20:18.05:659,18,0	1/1:10,0:11:14.65:483,15,0
chr10	10515493	.	T	TGC	268.27	PASS	AB=0.960;AC=14;AF=0.250;AN=56;BaseQRankSum=10.591;DP=472;FS=33.708;HRun=0;HaplotypeScore=102.2755;InbreedingCoeff=-0.1494;MQ=63.69;MQ0=8;MQRankSum=-2.699;QD=1.30;ReadPosRankSum=0.243;VQSLOD=0.0800;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:23.40:0,23,190	0/0:7,0:7:5.99:0,6,51	0/0:38,0:20:50.06:0,50,509	0/0:40,0:26:52.69:0,53,523	0/0:25,0:25:68.26:0,68,761	0/1:16,0:16:36.46:36,0,50	0/1:21,0:23:26.21:26,0,242	0/0:17,0:16:23.46:0,23,220	0/1:13,0:15:85.72:86,0,90	0/0:20,0:20:19.30:0,19,303	0/1:10,1:12:11.09:11,0,101	0/1:24,0:24:42.25:42,0,86	0/0:5,0:5:2.84:0,3,10	0/0:13,0:13:1.30:0,1,40	1/1:11,0:11:15.66:80,16,0	0/1:15,0:16:33.81:34,0,114	0/1:11,0:12:27.11:27,0,79	0/0:14,0:15:15:0,15,192	0/0:22,0:20:28.89:0,29,361	0/1:13,0:15:30.81:31,0,81	0/1:20,0:21:5.34:5,0,101	0/0:10,0:10:11.94:0,12,91	0/1:13,0:13:8.38:8,0,97	0/0:12,0:13:11.65:0,12,114	0/0:12,0:12:36.05:0,36,444	0/1:16,0:16:31.79:32,0,130	0/1:12,0:12:0.62:1,0,142	0/0:11,0:11:21.71:0,22,183
chr10	10517135	.	T	TTGTGTGTG	10873.98	PASS	AB=0.727;AC=47;AF=0.839;AN=56;BaseQRankSum=4.551;DP=977;FS=34.600;HRun=0;HaplotypeScore=307.6753;InbreedingCoeff=0.6046;MQ=53.12;MQ0=4;MQRankSum=-6.924;QD=12.72;ReadPosRankSum=-3.711;VQSLOD=2.5613;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:33,0:57:30.10:565,30,0	1/1:12,1:18:8.77:251,9,0	0/0:29,0:21:5.96:0,6,67	0/0:34,0:17:0.89:0,1,2	0/0:26,0:27:51.07:0,51,1037	1/1:18,0:21:12.93:351,13,0	1/1:44,0:49:22.94:530,23,0	1/1:32,0:30:29.30:516,29,0	1/1:37,1:45:38.68:830,39,0	1/1:40,0:58:77.05:1138,77,0	0/1:15,0:23:57.99:231,0,58	1/1:29,0:39:29.62:599,30,0	1/1:24,0:41:1.45:530,1,0	1/1:20,0:39:24.05:401,24,0	1/1:35,0:57:45.11:782,45,0	1/1:22,0:45:54.16:1086,54,0	1/1:15,0:30:20.94:400,21,0	1/1:15,0:18:15.04:261,15,0	1/1:21,0:21:5.98:47,6,0	1/1:27,0:26:6.49:151,6,0	1/1:52,0:50:2.99:25,3,0	1/1:28,0:39:11.92:209,12,0	1/1:16,0:26:8.82:211,9,0	1/1:28,0:45:14.97:195,15,0	0/0:28,0:32:63.17:0,63,1294	1/1:20,0:33:48.12:851,48,0	1/1:20,0:27:15.05:316,15,0	1/1:12,0:12:21.05:396,21,0
chr10	10517528	.	A	AT	15840.37	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-11.723;DP=668;FS=0.962;HRun=8;HaplotypeScore=60.8948;InbreedingCoeff=0.9883;MQ=78.25;MQ0=0;MQRankSum=-5.889;QD=27.69;ReadPosRankSum=4.898;VQSLOD=4.9840;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,34:37:71.83:1080,72,0	1/1:4,7:11:18.05:205,18,0	0/0:33,0:32:45.61:0,46,571	0/0:18,0:17:38.97:0,39,344	0/0:31,0:31:75:0,75,681	1/1:0,31:31:84.25:969,84,0	1/1:2,23:25:63.19:727,63,0	1/1:3,23:27:72.03:800,72,0	1/1:4,17:21:45.13:519,45,0	1/1:5,16:21:51.14:581,51,0	1/1:3,16:19:48.14:554,48,0	1/1:3,24:27:72.21:831,72,0	1/1:2,10:12:27.08:312,27,0	1/1:4,26:30:66.20:762,66,0	1/1:2,29:31:81.24:935,81,0	1/1:2,23:25:60.18:693,60,0	1/1:3,29:32:78.23:900,78,0	1/1:3,13:16:36.11:415,36,0	1/1:9,22:32:69.04:776,69,0	1/1:3,23:27:41.53:699,42,0	1/1:3,23:26:63.19:727,63,0	1/1:4,29:33:79.12:900,79,0	1/1:1,15:16:15.32:423,15,0	1/1:0,19:19:54.16:623,54,0	0/0:14,0:14:24:0,24,220	1/1:4,24:28:47.73:784,48,0	1/1:2,16:18:39.12:450,39,0	1/1:1,7:8:15.04:173,15,0
chr10	10518230	.	G	GT	978.67	PASS	AB=0.905;AC=18;AF=0.321;AN=56;BaseQRankSum=-1.253;DP=614;FS=4.062;HRun=14;HaplotypeScore=77.6573;InbreedingCoeff=0.1100;MQ=68.96;MQ0=1;MQRankSum=3.603;QD=3.40;ReadPosRankSum=-3.357;VQSLOD=0.0111;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,4:37:27.56:0,28,287	1/1:3,7:10:18.61:161,19,0	0/1:30,0:19:9.61:10,0,62	0/0:23,1:15:10.79:0,11,78	0/0:30,0:30:13.39:0,13,205	0/1:14,1:16:4.89:5,0,124	0/0:22,1:24:9.21:0,9,163	1/1:13,16:30:7.69:303,8,0	0/0:16,0:16:37.89:0,38,226	0/1:25,2:27:16.75:17,0,226	0/1:23,0:22:41.72:42,0,102	0/0:19,3:23:2.16:0,2,121	0/0:16,0:16:2.91:0,3,138	0/1:13,1:14:6.57:7,0,81	0/0:23,1:25:11.44:0,11,256	0/1:13,3:16:18.81:19,0,140	0/0:17,0:17:15.23:0,15,197	0/0:30,1:31:4.51:0,5,252	0/1:11,12:24:25.11:204,0,25	1/1:5,16:21:37.31:260,37,0	1/1:3,3:7:8.84:67,9,0	0/0:18,0:19:16.09:0,16,128	0/1:15,1:16:10.40:10,0,147	0/0:18,0:19:32.52:0,33,184	0/1:17,0:19:36.92:37,0,106	0/1:26,8:33:6.35:6,0,271	0/0:22,2:24:26.24:0,26,283	0/0:18,0:20:4.89:0,5,140
chr10	10521009	.	A	AT	8055.21	PASS	AB=0.909;AC=35;AF=0.625;AN=56;BaseQRankSum=-12.222;DP=509;FS=14.502;HRun=9;HaplotypeScore=47.1563;InbreedingCoeff=0.9205;MQ=67.66;MQ0=0;MQRankSum=-3.039;QD=23.83;ReadPosRankSum=2.432;VQSLOD=4.3538;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,31:33:87.13:945,87,0	1/1:2,4:6:12.03:133,12,0	0/0:14,0:12:14.82:0,15,114	0/0:11,0:7:20.99:0,21,181	0/0:26,0:26:59.98:0,60,520	0/0:17,0:17:22.07:0,22,361	0/0:10,0:10:20.98:0,21,182	0/0:22,0:22:58.23:0,58,513	0/0:20,0:20:53.98:0,54,469	1/1:5,23:29:63.11:674,63,0	1/1:1,14:15:42.11:464,42,0	1/1:4,17:21:39.11:431,39,0	1/1:0,15:15:26.76:296,27,0	1/1:0,9:9:21.06:232,21,0	1/1:1,20:21:51.14:564,51,0	1/1:2,10:12:24.06:266,24,0	1/1:3,22:25:63.17:697,63,0	1/1:2,13:15:16.06:405,16,0	0/1:9,1:10:9.19:9,0,158	0/0:23,0:23:53.98:0,54,468	0/0:14,0:14:32.99:0,33,286	1/1:6,10:16:30.08:327,30,0	1/1:3,17:20:48.13:531,48,0	1/1:2,19:21:51.14:564,51,0	0/0:14,0:14:41.98:0,42,361	1/1:5,11:16:30.06:321,30,0	1/1:6,26:30:66.18:730,66,0	1/1:5,17:22:42.11:464,42,0
chr10	10522281	.	TTC	T	1627.04	PASS	AB=0.920;AC=30;AF=0.556;AN=54;BaseQRankSum=4.270;DP=443;FS=63.173;HRun=0;HaplotypeScore=68.0588;InbreedingCoeff=-0.4663;MQ=39.37;MQ0=38;MQRankSum=2.575;QD=4.01;ReadPosRankSum=5.982;VQSLOD=-0.5024;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:29,2:27:49.02:122,0,49	1/1:5,1:6:15.76:91,16,0	0/0:5,0:1:2.04:0,2,6	./.	0/0:29,0:29:31.07:0,31,310	0/1:11,0:8:6.94:30,0,7	1/1:22,1:19:18.03:186,18,0	0/1:18,0:17:62.57:105,0,63	0/1:14,1:15:42.02:73,0,42	0/1:17,0:17:55.60:57,0,56	0/1:19,0:15:1.53:2,0,94	0/1:10,9:19:35.22:138,0,35	0/1:10,1:11:8.06:68,0,8	1/1:6,8:14:0.98:67,1,0	0/1:16,0:14:8.68:40,0,9	1/1:7,0:6:14.09:74,14,0	0/1:20,0:18:20.87:95,0,21	0/1:13,11:20:20.11:42,0,20	0/1:21,1:19:37.30:37,0,141	0/1:24,1:24:53.31:130,0,53	0/1:4,0:4:6.11:46,0,6	0/1:6,3:8:19.50:20,0,41	0/1:11,0:10:24.23:46,0,24	1/1:14,0:10:1.47:25,1,0	0/1:11,0:10:1.19:1,0,108	0/1:27,2:27:99:123,0,138	0/1:8,6:13:54.33:61,0,54	0/1:15,1:12:7.08:99,0,7
chr10	10522667	.	G	GT	23655.23	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-12.005;DP=687;FS=1.397;HRun=1;HaplotypeScore=61.8882;InbreedingCoeff=0.9992;MQ=86.30;MQ0=0;MQRankSum=-7.581;QD=39.89;ReadPosRankSum=4.126;VQSLOD=5.4093;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,63:65:99:2455,166,0	1/1:1,7:8:24.08:357,24,0	0/0:33,0:33:89.35:0,89,1085	0/0:18,0:18:39.12:0,39,485	0/0:25,0:25:66.21:0,66,852	1/1:1,22:23:54.18:808,54,0	1/1:0,25:25:66.22:988,66,0	1/1:1,28:29:84.28:1254,84,0	1/1:0,19:19:48.16:719,48,0	1/1:1,26:27:78.23:1113,78,0	1/1:0,21:20:60.20:898,60,0	1/1:1,29:30:78.26:1168,78,0	1/1:2,19:21:57.19:850,57,0	1/1:1,13:14:33.11:494,33,0	1/1:0,29:29:78.26:1168,78,0	1/1:1,23:24:63.21:944,63,0	1/1:0,33:33:99:1483,99,0	1/1:0,14:14:36.12:539,36,0	1/1:3,27:30:84.23:1194,84,0	1/1:0,19:19:54.18:802,54,0	1/1:2,29:31:81.27:1213,81,0	1/1:0,21:21:60.16:873,60,0	1/1:1,19:20:57.14:811,57,0	1/1:0,29:29:72.24:1079,72,0	0/0:18,0:18:54.18:0,54,698	1/1:0,28:28:84.26:1233,84,0	1/1:2,20:22:51.17:763,51,0	1/1:0,11:11:30.10:449,30,0
chr10	10526417	.	TACACACAC	T	9900.29	PASS	AB=0.700;AC=43;AF=0.768;AN=56;BaseQRankSum=2.043;DP=686;FS=15.576;HRun=0;HaplotypeScore=190.9804;InbreedingCoeff=0.2343;MQ=50.96;MQ0=8;MQRankSum=-4.711;QD=16.12;ReadPosRankSum=2.182;VQSLOD=3.1115;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:22,12:34:40.22:134,0,40	1/1:2,4:6:9.03:228,9,0	0/0:20,0:11:3.01:0,3,43	0/0:27,0:19:6.02:0,6,104	0/0:16,0:25:8.97:0,9,95	1/1:8,13:21:20.87:512,21,0	1/1:20,13:33:15.05:381,15,0	0/1:24,0:22:8.59:103,0,9	1/1:13,17:33:33.11:796,33,0	1/1:12,13:25:29.99:516,30,0	1/1:10,13:24:11.07:215,11,0	1/1:14,9:23:17.95:389,18,0	1/1:8,15:22:17.93:437,18,0	1/1:8,15:26:25.52:483,26,0	0/1:10,20:32:2.84:834,0,3	1/1:12,17:31:36.64:946,37,0	0/1:22,11:32:29.60:152,0,30	0/1:11,8:20:6.95:196,0,7	1/1:17,6:22:10.21:119,10,0	1/1:11,11:24:18.06:430,18,0	1/1:18,8:25:2.74:76,3,0	1/1:6,11:19:27.09:645,27,0	1/1:12,12:24:14.54:283,15,0	1/1:15,12:27:9.03:229,9,0	0/1:5,0:20:1.66:2,0,234	1/1:11,13:25:1.67:745,2,0	1/1:6,14:20:30.10:761,30,0	0/1:3,12:15:8.91:290,0,9
chr10	10528569	.	T	TC	21954.42	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-10.852;DP=618;FS=0.919;HRun=4;HaplotypeScore=56.9456;InbreedingCoeff=0.9988;MQ=77.95;MQ0=0;MQRankSum=-6.785;QD=41.66;ReadPosRankSum=4.981;VQSLOD=2.5712;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,25:26:63.21:1007,63,0	1/1:0,8:8:24.08:384,24,0	0/0:22,0:22:62.49:0,62,767	0/0:19,0:19:47.07:0,47,570	0/0:30,0:30:90.24:0,90,1197	1/1:0,23:23:57.19:911,57,0	1/1:1,23:24:69.24:1103,69,0	1/1:2,18:19:45.09:669,45,0	1/1:0,19:19:54.18:863,54,0	1/1:1,25:25:75.23:1149,75,0	1/1:0,12:12:27.09:432,27,0	1/1:0,29:29:75.26:1199,75,0	1/1:0,22:22:54.18:863,54,0	1/1:0,18:18:51.17:815,51,0	1/1:0,18:18:48.16:767,48,0	1/1:0,14:14:33.11:528,33,0	1/1:0,39:39:99:1775,111,0	1/1:0,31:31:78.27:1247,78,0	1/1:1,27:28:72.25:1143,72,0	1/1:0,22:22:63.21:1007,63,0	1/1:2,31:33:84.29:1343,84,0	1/1:1,23:24:54.18:863,54,0	1/1:0,10:10:27.09:432,27,0	1/1:0,18:18:48.16:767,48,0	0/0:19,0:19:48.16:0,48,671	1/1:1,23:24:66.23:1056,66,0	1/1:3,23:26:63.21:1007,63,0	1/1:0,13:13:39.13:623,39,0
chr10	10529272	.	CAA	C	9002.75	PASS	AB=0.579;AC=47;AF=0.839;AN=56;BaseQRankSum=1.422;DP=565;FS=1.714;HRun=13;HaplotypeScore=79.8278;InbreedingCoeff=0.8395;MQ=79.39;MQ0=4;MQRankSum=-2.493;QD=19.32;ReadPosRankSum=7.199;VQSLOD=4.1621;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,30:37:65.47:639,65,0	0/1:3,8:10:11.91:101,0,12	0/0:28,0:26:10.58:0,11,387	0/0:19,0:17:14.21:0,14,228	0/0:26,0:28:69.66:0,70,930	1/1:4,16:20:44.92:436,45,0	1/1:7,13:20:13.28:193,13,0	1/1:8,17:26:46.39:490,46,0	1/1:1,11:12:27.04:261,27,0	1/1:3,17:23:41.36:422,41,0	1/1:4,19:23:50.76:477,51,0	1/1:0,8:8:15.02:145,15,0	1/1:4,14:18:16.13:352,16,0	1/1:2,5:7:14.57:144,15,0	1/1:3,16:19:42.05:407,42,0	1/1:6,17:23:51.04:495,51,0	1/1:6,22:29:50.61:477,51,0	1/1:1,27:30:71.59:664,72,0	1/1:4,13:18:38.73:354,39,0	1/1:3,20:23:47.99:466,48,0	1/1:0,13:13:30.03:291,30,0	1/1:2,18:20:38.96:378,39,0	1/1:1,17:18:45.06:436,45,0	1/1:2,12:15:20.96:253,21,0	0/0:19,0:21:53.11:0,53,633	1/1:1,23:25:70.34:643,70,0	1/1:2,15:17:29.68:273,30,0	1/1:0,8:8:21.03:204,21,0
chr10	10531562	.	C	CA	1426.18	PASS	AB=0.895;AC=36;AF=0.750;AN=48;BaseQRankSum=0.640;DP=437;FS=6.307;HRun=17;HaplotypeScore=85.5729;InbreedingCoeff=-0.1450;MQ=32.98;MQ0=73;MQRankSum=-2.059;QD=3.45;ReadPosRankSum=0.920;VQSLOD=0.2815;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:14:5.93:41,6,0	1/1:7,1:8:16.56:88,17,0	1/1:17,0:2:2.74:12,3,0	0/1:16,0:2:0.02:0,0,0	0/1:22,2:20:40.16:40,0,52	0/1:11,3:15:16.62:75,0,17	1/1:17,3:17:2.68:63,3,0	./.	0/1:11,1:11:13.60:38,0,14	0/1:23,0:25:26.65:88,0,27	1/1:10,2:17:18.77:101,19,0	0/1:8,1:8:7.84:30,0,8	1/1:9,1:8:0.83:32,1,0	1/1:12,0:13:2.74:59,3,0	1/1:13,1:13:14.92:84,15,0	1/1:11,4:17:22.76:137,23,0	0/1:20,0:11:9.30:47,0,9	0/1:15,2:13:5.52:19,0,6	./.	./.	./.	1/1:9,2:12:17.27:94,17,0	1/1:9,1:12:14.44:82,14,0	0/1:20,0:15:1.39:47,0,1	0/0:18,1:15:1.29:0,1,68	0/1:21,3:27:5.75:146,0,6	1/1:18,3:21:12.31:130,12,0	1/1:17,3:18:8.22:98,8,0
chr10	10532082	.	T	TC	9552.41	PASS	AB=1.000;AC=45;AF=0.804;AN=56;BaseQRankSum=-7.053;DP=516;FS=5.951;HRun=6;HaplotypeScore=62.7305;InbreedingCoeff=0.9000;MQ=72.85;MQ0=6;MQRankSum=-3.687;QD=23.88;ReadPosRankSum=2.456;VQSLOD=4.7172;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:56.70:0,57,609	1/1:0,6:6:18.06:226,18,0	0/0:27,0:23:63.08:0,63,620	0/0:17,0:17:39:0,39,454	0/0:22,0:22:57.08:0,57,564	1/1:7,0:23:34.41:195,34,0	1/1:0,0:13:19.89:100,20,0	0/1:25,0:25:0.66:137,0,1	1/1:1,0:13:19.84:98,20,0	1/1:2,12:14:36.10:434,36,0	1/1:1,13:14:39.08:473,39,0	1/1:1,10:10:30.10:377,30,0	1/1:2,22:23:56.90:715,57,0	1/1:0,18:17:45.14:565,45,0	1/1:2,20:22:48.15:602,48,0	1/1:2,12:14:36.50:433,37,0	1/1:1,23:23:57.18:717,57,0	1/1:0,12:12:30.09:377,30,0	1/1:15,0:15:13:85,13,0	1/1:10,0:10:14.20:70,14,0	1/1:7,0:7:5.81:34,6,0	1/1:2,23:25:57.18:715,57,0	1/1:2,23:25:66.21:829,66,0	1/1:3,26:28:60.19:751,60,0	0/0:24,0:24:69.15:0,69,703	1/1:0,21:21:63.20:789,63,0	1/1:4,10:14:21.07:264,21,0	1/1:4,15:19:45.14:566,45,0
chr10	10532087	.	C	CCCCCCACA	4194.55	PASS	AB=1.000;AC=14;AF=0.250;AN=56;BaseQRankSum=-2.463;DP=519;FS=9.449;HRun=0;HaplotypeScore=161.0065;InbreedingCoeff=0.7565;MQ=72.45;MQ0=6;MQRankSum=-4.250;QD=31.78;ReadPosRankSum=-7.480;VQSLOD=0.3160;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:71.20:0,71,1716	0/0:7,0:7:18.06:0,18,222	0/0:26,0:22:63.08:0,63,1423	0/0:18,0:18:46.66:0,47,1062	0/0:21,0:21:63.10:0,63,1538	1/1:20,0:19:19.83:114,20,0	1/1:13,0:13:14.72:88,15,0	1/1:3,10:33:78.08:1559,78,0	0/1:13,0:13:15.90:76,0,16	0/0:14,0:14:0.03:0,0,285	0/0:13,0:13:19.21:0,19,423	0/0:11,0:10:28.33:0,28,335	0/0:24,0:23:57.65:0,58,712	0/0:18,0:17:33.72:0,34,507	0/0:21,0:21:47.62:0,48,548	0/0:16,0:15:34.68:0,35,440	0/0:24,0:23:55.42:0,55,667	0/1:14,0:14:17.60:18,0,336	1/1:4,6:17:45.12:1174,45,0	1/1:4,5:14:18.06:761,18,0	1/1:2,2:8:12:404,12,0	0/0:24,0:24:57.16:0,57,694	0/0:23,0:23:66.21:0,66,814	0/0:30,0:29:63.43:0,63,732	0/0:24,0:24:72.22:0,72,1739	0/0:21,0:21:47:0,47,684	0/0:11,0:11:24.07:0,24,285	0/0:15,0:15:45.14:0,45,554
chr10	10532246	.	GAA	G	6522.06	PASS	AB=0.693;AC=42;AF=0.750;AN=56;BaseQRankSum=1.080;DP=591;FS=8.583;HRun=14;HaplotypeScore=88.9544;InbreedingCoeff=0.6294;MQ=65.40;MQ0=3;MQRankSum=-0.972;QD=14.03;ReadPosRankSum=5.888;VQSLOD=3.4915;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:35:84.02:0,84,957	1/1:2,6:8:20.62:168,21,0	0/0:21,0:11:24.74:0,25,167	0/0:26,0:11:4.25:0,4,38	0/0:20,0:20:45.02:0,45,474	1/1:6,9:17:11.64:205,12,0	1/1:7,15:23:29.52:308,30,0	0/1:14,11:25:2.88:266,0,3	1/1:7,18:25:29.70:369,30,0	1/1:12,13:28:23.27:299,23,0	0/1:6,8:16:7.37:152,0,7	1/1:9,11:20:20.89:190,21,0	1/1:13,4:17:32.91:274,33,0	1/1:7,9:17:35.03:293,35,0	1/1:5,17:23:38.69:343,39,0	1/1:3,15:18:29.76:324,30,0	1/1:8,11:20:23.76:260,24,0	1/1:6,13:21:38.46:329,38,0	1/1:4,11:15:38.82:346,39,0	1/1:7,14:21:44.68:415,45,0	1/1:6,13:19:26.54:249,27,0	1/1:5,9:15:21.68:201,22,0	0/1:10,2:13:18.82:119,0,19	1/1:5,21:27:56.25:495,56,0	0/0:18,0:19:44.58:0,45,506	1/1:11,21:35:41.12:454,41,0	1/1:6,19:26:37.51:320,38,0	0/1:6,6:13:8.01:143,0,8
chr10	10532337	.	A	AGCAAG	6762.78	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-8.612;DP=647;FS=0.918;HRun=0;HaplotypeScore=118.8839;InbreedingCoeff=0.9999;MQ=75.60;MQ0=0;MQRankSum=-8.698;QD=73.51;ReadPosRankSum=-3.311;VQSLOD=5.2808;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,114,2291	0/0:15,0:15:45.14:0,45,961	0/0:15,0:15:39.11:0,39,767	0/0:19,0:19:48.14:0,48,922	0/0:27,0:27:81.25:0,81,1676	0/0:22,0:22:63.22:0,63,1400	0/0:15,0:15:45.14:0,45,926	1/1:5,20:33:87.22:2313,87,0	0/0:39,0:39:99:0,111,2474	0/0:24,0:24:66.22:0,66,1430	0/0:15,0:15:45.15:0,45,964	0/0:23,0:23:63.22:0,63,1387	0/0:20,0:20:60.21:0,60,1335	0/0:26,0:26:78.27:0,78,1739	0/0:38,0:37:96.33:0,96,2102	0/0:27,0:27:75.26:0,75,1672	0/0:24,0:24:72.24:0,72,1564	0/0:19,0:19:48.16:0,48,1063	1/1:2,9:14:42.06:1127,42,0	1/1:1,17:20:48.16:1519,48,0	1/1:1,21:25:60.14:1803,60,0	0/0:21,0:21:60.14:0,60,1199	0/0:17,0:17:48.09:0,48,954	0/0:27,0:27:75.26:0,75,1672	0/0:14,0:14:42.14:0,42,898	0/0:25,0:25:75.25:0,75,1633	0/0:24,0:24:69.24:0,69,1536	0/0:21,0:21:63.22:0,63,1383
chr10	10532834	.	A	AG	3454.33	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=5.398;DP=595;FS=7.274;HRun=4;HaplotypeScore=70.7820;InbreedingCoeff=0.9942;MQ=63.53;MQ0=1;MQRankSum=-0.981;QD=34.20;ReadPosRankSum=-1.050;VQSLOD=3.7104;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:92.52:0,93,1042	0/0:9,0:9:24.07:0,24,272	0/0:23,0:18:46:0,46,500	0/0:20,0:16:41.19:0,41,446	0/0:21,0:21:47.87:0,48,543	0/0:28,0:28:84.22:0,84,943	0/0:20,0:20:51.13:0,51,568	1/1:7,16:24:51.17:689,51,0	0/0:27,0:27:78.19:0,78,864	0/0:16,0:16:36.10:0,36,408	0/0:17,0:17:45.13:0,45,510	0/0:10,0:10:24.05:0,24,264	0/0:21,0:21:60.15:0,60,667	0/0:19,0:19:51.14:0,51,577	0/0:22,0:22:57.13:0,57,622	0/0:12,0:12:33.09:0,33,374	0/0:31,0:31:90.24:0,90,1011	0/0:17,0:17:42.12:0,42,475	1/1:2,20:22:63.21:859,63,0	1/1:1,26:27:75.21:1004,75,0	1/1:3,25:28:66.22:902,66,0	0/0:11,0:11:21.04:0,21,229	0/0:35,0:35:96.26:0,96,1077	0/0:29,0:29:87.23:0,87,976	0/0:12,0:12:21.06:0,21,238	0/0:16,0:16:45.12:0,45,504	0/0:36,0:36:99:0,99,1103	0/0:6,0:6:18.02:0,18,179
chr10	10533007	.	T	TAA	3701.52	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=1.668;DP=666;FS=17.292;HRun=8;HaplotypeScore=85.1295;InbreedingCoeff=0.9410;MQ=70.98;MQ0=2;MQRankSum=-0.439;QD=38.96;ReadPosRankSum=-3.721;VQSLOD=1.6590;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,111,1237	0/0:10,0:10:24.03:0,24,258	0/0:30,0:20:1.96:0,2,226	0/0:22,0:19:19.05:0,19,270	0/0:27,0:27:72.14:0,72,775	0/0:28,0:28:78.17:0,78,849	0/0:19,0:19:18.07:0,18,475	1/1:2,29:31:93.11:1356,93,0	0/0:27,0:27:60.13:0,60,669	0/0:25,0:25:69.18:0,69,767	0/0:15,0:15:45.11:0,45,493	0/0:15,0:15:45.10:0,45,485	0/0:18,0:18:51.13:0,51,566	0/0:20,0:20:54.14:0,54,600	0/0:28,0:28:78.17:0,78,851	0/0:16,0:16:42.11:0,42,468	0/0:37,0:37:99:0,99,1102	0/0:23,0:23:45.78:0,46,682	1/1:7,15:22:48.15:728,48,0	1/1:5,21:27:66.23:1046,66,0	1/1:1,13:14:36.12:571,36,0	0/0:17,0:17:45.11:0,45,502	0/0:14,0:14:33.09:0,33,368	0/0:31,0:31:84.22:0,84,936	0/0:15,0:15:39.08:0,39,425	0/0:33,0:33:87.19:0,87,956	0/0:36,0:36:84.19:0,84,936	0/0:19,0:19:57.13:0,57,625
chr10	10533607	.	AGT	A	1060.08	PASS	AB=0.880;AC=18;AF=0.346;AN=52;BaseQRankSum=3.480;DP=717;FS=0.558;HRun=0;HaplotypeScore=100.7069;InbreedingCoeff=-0.2240;MQ=67.68;MQ0=8;MQRankSum=1.296;QD=2.64;ReadPosRankSum=1.984;VQSLOD=1.8353;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:30,13:44:32.90:345,33,0	0/0:4,0:4:9.03:0,9,135	./.	./.	1/1:12,2:15:8.86:80,9,0	0/0:14,0:31:18.01:0,18,176	0/0:15,0:25:18.01:0,18,176	0/0:34,0:34:32.77:0,33,325	0/0:11,0:25:9.86:0,10,169	0/0:21,0:32:37.23:0,37,387	0/0:7,0:12:6.43:0,6,74	0/1:20,2:23:33.07:33,0,330	0/1:28,1:30:23.14:23,0,221	0/1:34,3:38:56.13:56,0,596	0/1:37,6:44:98.24:98,0,421	0/1:21,4:24:99:99,0,282	0/1:15,3:20:91.33:91,0,280	0/1:13,0:13:26.87:27,0,39	0/0:20,0:20:18.03:0,18,197	0/0:11,0:22:14.70:0,15,133	0/0:39,0:63:35.35:0,35,379	0/1:14,4:17:18.01:18,0,153	0/1:10,0:12:19.27:19,0,36	0/1:32,7:39:93.06:93,0,761	0/1:17,9:26:27.19:128,0,27	0/1:24,0:24:15.02:15,0,189	0/1:15,3:18:75.10:75,0,178	0/1:10,1:11:21.04:21,0,101
chr10	10534178	.	TAGAAGCTGA	T	26293.16	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=16.647;DP=695;FS=31.096;HRun=0;HaplotypeScore=212.8119;InbreedingCoeff=0.9773;MQ=83.69;MQ0=0;MQRankSum=-19.327;QD=60.03;ReadPosRankSum=5.125;VQSLOD=3.2726;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,129,5835	1/1:4,4:8:9.01:268,9,0	0/0:29,0:29:61.09:0,61,2586	0/0:30,0:30:81.28:0,81,3134	0/0:17,0:17:48.16:0,48,2255	1/1:2,21:23:54.19:1580,54,0	1/1:5,21:26:57.20:1675,57,0	0/0:47,0:47:99:0,126,4920	1/1:4,29:33:78.27:2310,78,0	1/1:2,13:15:39.13:1154,39,0	1/1:2,10:12:24.05:704,24,0	1/1:7,34:41:99:2951,99,0	1/1:5,23:28:60.21:1789,60,0	1/1:6,17:23:45.15:1334,45,0	1/1:7,34:41:87.30:2592,87,0	1/1:3,26:29:69.24:2043,69,0	1/1:7,16:23:33.11:984,33,0	1/1:4,17:21:39.13:1128,39,0	0/0:18,0:18:48.16:0,48,1903	0/0:24,0:24:69.23:0,69,3171	0/0:40,0:40:99:0,105,4671	1/1:1,19:20:54.19:1558,54,0	1/1:5,7:12:23.16:641,23,0	1/1:8,21:29:33.07:979,33,0	0/0:7,0:7:15.05:0,15,652	1/1:7,8:15:18.03:468,18,0	1/1:4,26:30:63.22:1868,63,0	1/1:3,6:9:9.03:268,9,0
chr10	10534781	.	A	AAAAAAAG	3085.42	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-1.057;DP=489;FS=16.952;HRun=0;HaplotypeScore=109.3578;InbreedingCoeff=0.9047;MQ=57.68;MQ0=7;MQRankSum=-7.943;QD=36.73;ReadPosRankSum=-3.651;VQSLOD=1.6590;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,132,2996	0/0:9,0:9:18.06:0,18,419	1/1:9,0:2:1.01:3,1,0	0/0:11,0:3:4.57:0,5,119	0/0:20,0:20:45.14:0,45,1007	0/0:9,0:9:21.02:0,21,397	0/0:19,0:19:48.15:0,48,1044	1/1:22,0:21:24.92:607,25,0	0/0:18,0:18:45.15:0,45,1050	0/0:20,0:19:45.15:0,45,1047	0/0:15,0:15:21.06:0,21,447	0/0:8,0:8:18.05:0,18,355	0/0:7,0:7:12.03:0,12,172	0/0:14,0:14:36.11:0,36,774	0/0:17,0:16:33.11:0,33,723	0/0:13,0:13:36.12:0,36,842	0/0:27,0:26:63.22:0,63,1445	0/0:23,0:23:54.17:0,54,1217	1/1:9,11:19:39.08:1290,39,0	1/1:16,5:22:27.07:872,27,0	1/1:5,4:11:15.05:472,15,0	0/0:20,0:20:39.12:0,39,808	0/0:14,0:13:33.10:0,33,704	0/0:16,0:16:45.15:0,45,1041	0/0:25,0:25:60.14:0,60,1245	0/0:23,0:22:57.19:0,57,1271	0/0:17,0:17:39.13:0,39,869	0/0:11,0:11:30.10:0,30,638
chr10	10536757	.	TTCCTAAGACC	T	2342.29	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=6.614;DP=590;FS=2.370;HRun=0;HaplotypeScore=198.9117;InbreedingCoeff=0.9892;MQ=76.53;MQ0=0;MQRankSum=-6.884;QD=70.98;ReadPosRankSum=-1.037;VQSLOD=3.3269;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,117,5705	0/0:8,0:8:24.08:0,24,1187	0/0:14,0:14:33.11:0,33,1659	0/0:17,0:17:48.15:0,48,2297	0/0:23,0:23:69.24:0,69,3444	0/0:23,0:23:48.13:0,48,2330	0/0:42,0:42:99:0,117,5726	1/1:1,12:13:39.13:1137,39,0	0/0:36,0:36:87.30:0,87,4522	0/0:26,0:26:78.26:0,78,3972	0/0:8,0:8:21.07:0,21,1091	0/0:24,0:24:54.19:0,54,2903	0/0:24,0:24:60.19:0,60,3005	0/0:20,0:20:48.16:0,48,2520	0/0:30,0:30:69.06:0,69,3559	0/0:27,0:27:65.74:0,66,3358	0/0:18,0:18:42.11:0,42,1988	0/0:15,0:15:39.13:0,39,2142	1/1:3,3:6:18.02:347,18,0	1/1:0,6:6:15.05:442,15,0	1/1:1,7:8:21.07:573,21,0	0/0:19,0:19:51.16:0,51,2451	0/0:18,0:18:51.17:0,51,2283	0/0:34,0:34:78.22:0,78,3778	0/0:17,0:17:51.18:0,51,2261	0/0:37,0:37:99:0,105,5168	0/0:25,0:25:60.21:0,60,3016	0/0:7,0:7:21.07:0,21,985
chr10	10536769	.	ACG	A	787.66	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=7.182;DP=562;FS=0.000;HRun=0;HaplotypeScore=141.5337;InbreedingCoeff=0.9646;MQ=78.56;MQ0=0;MQRankSum=-6.455;QD=26.26;ReadPosRankSum=0.769;VQSLOD=4.1784;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,108,2146	0/0:7,0:7:21.07:0,21,411	0/0:18,0:18:48.16:0,48,887	0/0:16,0:16:48.16:0,48,924	0/0:20,0:20:60.19:0,60,1177	0/0:18,0:18:36.12:0,36,729	0/0:40,0:40:96.32:0,96,1906	1/1:2,12:14:42.11:466,42,0	0/0:36,0:36:81.28:0,81,1619	0/0:27,0:27:78.27:0,78,1574	0/0:7,0:7:18.06:0,18,363	0/0:27,0:27:54.18:0,54,1093	0/0:23,0:23:57.20:0,57,1130	0/0:21,0:21:48.16:0,48,942	0/0:32,0:32:72.04:0,72,1426	0/0:29,0:29:66.01:0,66,1288	0/0:15,0:15:32.96:0,33,659	0/0:17,0:17:39.13:0,39,789	1/1:0,3:3:9.03:104,9,0	1/1:0,6:6:15.04:169,15,0	1/1:0,7:7:18.05:202,18,0	0/0:17,0:17:42.14:0,42,848	0/0:15,0:15:33.11:0,33,650	0/0:33,0:33:69.24:0,69,1395	0/0:14,0:14:42.13:0,42,785	0/0:31,0:31:84.29:0,84,1699	0/0:22,0:22:51.17:0,51,1009	0/0:4,0:4:12.04:0,12,243
chr10	10536819	.	T	TTGAAAGACGGGAGG	62365.24	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-6.029;DP=583;FS=9.345;HRun=0;HaplotypeScore=195.8517;InbreedingCoeff=0.9158;MQ=65.48;MQ0=1;MQRankSum=-11.508;QD=119.70;ReadPosRankSum=3.784;VQSLOD=4.2243;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,18:38:66.23:3610,66,0	1/1:4,1:5:9:426,9,0	0/0:18,0:18:51.15:0,51,1319	0/0:19,0:19:51.17:0,51,1900	0/0:14,0:14:39.01:0,39,1155	1/1:6,8:21:30.03:1577,30,0	1/1:15,11:30:57.20:3311,57,0	1/1:28,12:44:99:6187,123,0	1/1:11,17:34:59.91:4158,60,0	1/1:9,9:21:51.17:2814,51,0	1/1:3,2:5:8.89:632,9,0	1/1:5,13:25:51.18:3437,51,0	1/1:8,15:25:57.20:3435,57,0	1/1:11,19:33:84.07:5598,84,0	1/1:11,21:33:72.04:4683,72,0	1/1:4,16:24:50.98:3532,51,0	1/1:3,11:16:27.04:1555,27,0	1/1:7,12:22:51.17:3463,51,0	1/1:13,7:22:57.16:2735,57,0	1/1:3,4:8:8.95:250,9,0	1/1:10,10:24:35.80:1885,36,0	1/1:3,10:14:27.01:1322,27,0	1/1:4,1:6:12.04:354,12,0	1/1:7,12:22:21.03:946,21,0	0/0:11,0:11:30.10:0,30,1158	1/1:12,14:27:72.20:3955,72,0	1/1:5,11:19:39.09:2413,39,0	1/1:2,0:2:5.99:87,6,0
chr10	10537028	.	GCACACA	G	3905.07	PASS	AB=0.923;AC=28;AF=0.500;AN=56;BaseQRankSum=0.491;DP=505;FS=3.839;HRun=0;HaplotypeScore=181.8655;InbreedingCoeff=-0.2563;MQ=56.79;MQ0=6;MQRankSum=0.456;QD=9.52;ReadPosRankSum=3.523;VQSLOD=2.6241;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:25:40.07:48,0,40	0/1:5,0:4:0:0,0,0	0/0:20,0:15:38.32:0,38,568	0/0:21,0:18:32.05:0,32,560	0/0:16,0:16:45.12:0,45,1083	0/1:14,2:16:52.57:226,0,53	1/1:15,17:32:22.26:509,22,0	0/1:14,0:14:33.50:56,0,34	1/1:0,25:25:21.07:481,21,0	0/1:13,1:13:79.90:345,0,80	0/0:11,2:13:0:0,0,0	0/1:18,0:19:6.06:284,0,6	0/1:9,1:10:95.78:106,0,96	0/1:18,0:19:79.56:163,0,80	0/1:22,1:24:87.06:155,0,87	0/1:3,2:5:28.47:28,0,44	0/1:18,1:19:83.95:84,0,91	0/1:10,1:13:82.40:82,0,203	0/1:15,0:15:35.15:84,0,35	1/1:4,0:4:2.97:20,3,0	0/1:53,0:52:11.19:11,0,24	1/1:9,1:10:9:112,9,0	0/1:19,3:20:2.64:174,0,3	1/1:19,3:23:6.02:138,6,0	0/0:25,0:24:69.03:0,69,1681	0/1:17,3:20:51.36:486,0,51	0/1:9,0:10:7.41:159,0,7	0/1:11,0:11:52.90:152,0,53
chr10	10537030	.	A	ACACG	5877.13	PASS	AB=0.885;AC=38;AF=0.679;AN=56;BaseQRankSum=1.934;DP=519;FS=1.032;HRun=0;HaplotypeScore=177.9279;InbreedingCoeff=0.6069;MQ=55.06;MQ0=7;MQRankSum=-5.614;QD=16.56;ReadPosRankSum=-0.967;VQSLOD=4.6173;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:9.13:0,9,64	0/0:1,3:4:0:0,0,0	0/0:19,0:14:38.31:0,38,499	0/0:21,0:18:32.05:0,32,516	0/0:15,0:15:45.12:0,45,775	1/1:16,0:16:26.64:297,27,0	1/1:30,2:32:9.27:395,9,0	0/1:15,0:14:63.05:63,0,103	0/1:25,0:25:39.53:40,0,72	1/1:13,2:14:19.85:459,20,0	0/1:2,11:14:0:0,0,0	1/1:9,12:20:17.69:289,18,0	1/1:4,5:10:20.93:333,21,0	1/1:14,5:20:26.79:459,27,0	1/1:16,7:23:17.05:387,17,0	1/1:7,1:8:9.03:161,9,0	1/1:2,18:20:18.06:398,18,0	1/1:10,4:14:30.09:565,30,0	0/1:15,0:15:41.48:41,0,148	1/1:4,0:4:2.97:20,3,0	0/0:53,0:53:19.71:0,20,264	1/1:8,2:10:9:112,9,0	1/1:18,4:21:18.50:255,19,0	1/1:21,3:25:5.87:114,6,0	0/0:25,0:24:66.18:0,66,1133	1/1:21,3:23:45.10:792,45,0	1/1:6,4:10:14.91:239,15,0	1/1:7,3:11:27.85:457,28,0
chr10	10537038	.	ACG	A	964.19	PASS	AB=0.995;AC=28;AF=0.519;AN=54;BaseQRankSum=0.421;DP=518;FS=7.907;HRun=0;HaplotypeScore=177.5542;InbreedingCoeff=-0.1776;MQ=43.91;MQ0=9;MQRankSum=-1.180;QD=2.29;ReadPosRankSum=-1.546;VQSLOD=1.1448;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:16.25:0,16,112	./.	0/1:16,0:11:24.74:25,0,199	0/1:13,0:10:2.44:2,0,231	0/0:15,0:14:42:0,42,653	0/1:15,0:15:22.96:44,0,23	1/1:33,2:35:20.68:131,21,0	0/0:16,0:14:19.93:0,20,135	0/1:30,0:30:1.16:34,0,1	0/1:16,0:15:56.41:118,0,56	0/0:11,0:11:0.47:0,0,1	1/1:26,0:25:14.54:131,15,0	0/1:10,0:10:35.24:35,0,62	0/1:19,0:19:23.79:43,0,24	0/1:19,1:20:40.02:40,0,53	0/1:8,0:8:16.07:16,0,37	0/1:21,0:20:13.75:14,0,106	0/1:15,0:15:38.06:38,0,65	0/1:15,0:15:38.64:39,0,68	1/1:4,0:4:1.25:3,1,0	0/1:50,2:52:1.06:1,0,233	1/1:8,0:8:3:25,3,0	1/1:21,0:19:7.55:73,8,0	1/1:28,0:28:5.43:30,5,0	0/0:26,0:25:63.05:0,63,1057	0/1:25,0:24:45.71:170,0,46	0/1:10,0:10:5.09:54,0,5	0/1:14,0:14:41.41:55,0,41
chr10	10537042	.	ACACACACG	A	1211.93	PASS	AB=1.000;AC=22;AF=0.393;AN=56;BaseQRankSum=-1.291;DP=521;FS=7.450;HRun=0;HaplotypeScore=209.5474;InbreedingCoeff=0.1014;MQ=43.29;MQ0=10;MQRankSum=2.388;QD=3.53;ReadPosRankSum=-2.091;VQSLOD=1.5177;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:23:61.82:62,0,69	0/1:4,0:3:0:0,0,0	0/0:13,0:8:11.65:0,12,81	0/1:11,0:9:10.84:11,0,39	0/0:15,0:14:35.76:0,36,902	0/1:16,0:16:5.07:5,0,258	0/1:38,0:38:25.83:26,0,50	1/1:6,11:15:35.86:339,36,0	0/1:30,0:30:99:120,0,168	0/1:21,0:19:23.19:23,0,392	0/1:11,0:11:0:0,0,0	0/1:27,0:26:7.51:8,0,24	0/1:11,0:11:7.69:8,0,248	0/0:19,0:19:14.31:0,14,276	0/0:21,0:21:3.44:0,3,251	0/0:10,0:10:6.02:0,6,136	0/0:22,0:21:1.36:0,1,310	0/0:16,0:16:28.06:0,28,549	1/1:16,1:17:11.37:302,11,0	1/1:4,0:4:3.01:46,3,0	1/1:52,0:52:24.94:395,25,0	0/0:7,0:7:0.47:0,0,1	0/1:19,0:17:10.12:14,0,10	1/1:29,0:28:2.26:7,2,0	0/0:23,0:22:56.27:0,56,1214	0/0:24,0:22:24.45:0,24,461	0/0:8,0:8:2.19:0,2,103	0/1:13,0:13:3.19:3,0,321
chr10	10537044	.	A	ACG	359.47	PASS	AB=0.981;AC=13;AF=0.232;AN=56;BaseQRankSum=-1.400;DP=511;FS=0.000;HRun=0;HaplotypeScore=186.5659;InbreedingCoeff=0.2190;MQ=42.92;MQ0=10;MQRankSum=-1.169;QD=1.91;ReadPosRankSum=-2.935;VQSLOD=2.0722;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:21,1:22:11.92:80,12,0	0/0:4,0:3:0:0,0,0	0/1:12,0:7:17.68:18,0,178	0/0:10,0:8:14.13:0,14,241	0/0:14,0:13:39.09:0,39,564	0/0:16,0:16:3.08:0,3,55	0/1:37,0:37:25.56:26,0,97	0/0:17,0:15:24.15:0,24,146	0/0:29,0:29:35.99:0,36,340	0/0:20,0:18:39.07:0,39,283	0/1:11,0:11:0:0,0,0	0/0:26,0:25:21.40:0,21,142	0/0:12,0:12:20.09:0,20,133	0/0:20,0:20:15.18:0,15,103	0/0:19,0:19:13.42:0,13,81	0/0:10,0:10:5.72:0,6,68	0/0:21,0:20:17.66:0,18,143	0/0:15,0:15:11.36:0,11,175	0/1:16,2:18:89.77:189,0,90	1/1:3,0:3:2.97:20,3,0	0/1:54,2:55:99:152,0,269	1/1:7,0:7:0.89:2,1,0	0/0:19,0:17:7.73:0,8,35	0/0:28,0:27:4.55:0,5,20	0/0:22,0:21:60.19:0,60,892	0/0:21,0:19:41.78:0,42,291	0/1:8,0:8:5.97:6,0,78	0/1:14,0:14:0.56:1,0,119
chr10	10537048	.	ACG	A	2230.99	PASS	AB=0.933;AC=31;AF=0.574;AN=54;BaseQRankSum=1.321;DP=510;FS=14.633;HRun=0;HaplotypeScore=169.5765;InbreedingCoeff=0.0111;MQ=41.57;MQ0=12;MQRankSum=1.251;QD=5.39;ReadPosRankSum=-1.464;VQSLOD=2.2214;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:22,2:24:8.07:101,8,0	1/1:6,0:4:2.99:24,3,0	0/0:10,0:5:13.92:0,14,88	0/1:10,0:6:17.26:17,0,37	0/0:14,0:13:32.75:0,33,457	0/1:16,0:16:20.86:48,0,21	1/1:36,1:37:14.56:190,15,0	1/1:15,0:13:35.59:249,36,0	0/1:30,0:30:11.20:11,0,146	0/1:20,0:18:18.12:161,0,18	0/0:11,0:11:0.47:0,0,1	1/1:23,2:24:8.34:114,8,0	0/1:11,1:12:20.15:59,0,20	0/1:16,1:17:17.79:23,0,18	0/1:19,1:20:30.21:30,0,42	0/0:8,1:9:5.79:0,6,37	0/0:24,0:23:2.09:0,2,74	0/1:11,4:15:14.24:154,0,14	1/1:7,10:17:12.54:301,13,0	1/1:0,1:1:3.01:46,3,0	1/1:52,4:55:21.49:411,21,0	./.	1/1:15,3:16:4.95:72,5,0	1/1:26,3:28:5.28:28,5,0	0/0:22,0:21:41.27:0,41,576	0/1:22,1:21:11.19:173,0,11	0/1:7,2:9:10.16:62,0,10	0/1:12,2:14:9.38:122,0,9
chr10	10537050	.	GCA	G	124.89	PASS	AB=0.988;AC=13;AF=0.241;AN=54;BaseQRankSum=0.156;DP=519;FS=0.000;HRun=0;HaplotypeScore=179.0237;InbreedingCoeff=-0.0164;MQ=41.48;MQ0=12;MQRankSum=0.489;QD=0.43;ReadPosRankSum=-0.284;VQSLOD=2.5471;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:3.43:0,3,34	0/0:6,0:4:0.47:0,0,1	0/0:11,0:5:5.99:0,6,51	0/0:9,0:6:0:0,0,0	0/0:15,0:14:24.08:0,24,354	0/0:16,0:16:14.13:0,14,138	0/1:35,0:37:20.42:20,0,23	0/1:15,0:13:3.62:5,0,4	0/1:24,2:26:31.82:32,0,286	0/0:20,0:18:16.35:0,16,184	0/0:11,0:11:0.47:0,0,1	0/1:26,0:25:12.39:12,0,36	0/0:12,0:12:3.38:0,3,86	0/0:18,0:18:14.75:0,15,120	0/0:19,0:19:13.89:0,14,132	0/0:9,0:9:6.02:0,6,75	0/0:24,0:23:12.46:0,12,142	0/1:16,0:16:38.60:39,0,99	0/1:19,0:19:52.97:53,0,61	1/1:1,0:1:2.98:21,3,0	0/1:58,1:58:48.72:49,0,103	./.	0/1:17,0:15:1.53:6,0,2	0/1:29,0:28:0.30:0,0,0	0/1:22,1:22:12.85:13,0,254	0/1:24,0:22:3.41:3,0,153	0/0:9,0:9:6:0,6,41	0/0:14,0:14:14.78:0,15,141
chr10	10537104	.	ACTTTGGCCTCCAACTC	A	11533.32	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=12.141;DP=425;FS=31.642;HRun=0;HaplotypeScore=198.9280;InbreedingCoeff=0.9313;MQ=80.23;MQ0=0;MQRankSum=-12.294;QD=65.90;ReadPosRankSum=-0.182;VQSLOD=3.0206;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,12:17:23.75:946,24,0	1/1:0,3:3:6.02:267,6,0	0/0:17,0:15:18.37:0,18,1929	0/0:26,0:26:63.22:0,63,3130	0/0:13,0:13:30.10:0,30,2080	0/0:17,0:17:39.13:0,39,2798	0/0:28,0:28:75.25:0,75,5077	0/0:24,0:24:63.22:0,63,3319	0/0:24,0:24:57.15:0,57,3820	1/1:2,6:8:17.98:701,18,0	1/1:2,1:3:3.01:137,3,0	1/1:4,8:12:26.96:798,27,0	1/1:2,2:4:12.04:419,12,0	1/1:3,12:15:27.02:1082,27,0	1/1:5,7:12:18.06:710,18,0	1/1:0,9:9:24.55:1090,25,0	1/1:2,17:19:27.01:1113,27,0	1/1:6,12:18:23.88:851,24,0	0/0:21,0:21:48.16:0,48,2746	0/0:16,0:16:45.15:0,45,3247	0/0:53,0:53:99:0,137,8066	1/1:0,7:7:15.05:657,15,0	1/1:2,5:7:14.83:433,15,0	1/1:5,11:16:8.70:306,9,0	0/0:10,0:10:30.10:0,30,2227	1/1:5,10:15:27.04:910,27,0	1/1:2,3:5:15:563,15,0	1/1:0,5:5:12.04:549,12,0
chr10	10537415	.	T	TGG	13916.53	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=6.186;DP=655;FS=5.382;HRun=7;HaplotypeScore=139.8377;InbreedingCoeff=0.9319;MQ=85.16;MQ0=2;MQRankSum=-6.905;QD=24.54;ReadPosRankSum=2.180;VQSLOD=3.0907;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,36:44:87.30:1427,87,0	1/1:0,10:11:27.05:413,27,0	0/0:25,0:25:50.87:0,51,536	0/0:21,0:21:12.38:0,12,378	0/0:23,0:23:63.16:0,63,719	1/1:4,0:14:15.03:148,15,0	1/1:2,0:8:3.70:54,4,0	1/1:9,0:33:58.48:214,58,0	1/1:5,0:21:39.07:401,39,0	1/1:8,14:23:39.13:617,39,0	1/1:6,6:12:15.05:246,15,0	1/1:6,27:34:68.72:1090,69,0	1/1:5,12:16:30.01:492,30,0	1/1:6,25:31:75.25:1209,75,0	1/1:7,17:23:42.10:660,42,0	1/1:5,16:21:45.15:738,45,0	1/1:6,20:28:51.17:835,51,0	1/1:4,29:33:81.28:1329,81,0	1/1:7,0:16:22.71:83,23,0	1/1:2,0:8:14.97:53,15,0	1/1:14,0:72:75.17:353,75,0	1/1:2,12:16:36.12:589,36,0	1/1:2,8:9:15.05:245,15,0	1/1:7,23:30:57.19:935,57,0	0/0:19,0:19:45.13:0,45,524	1/1:6,13:19:33.10:514,33,0	1/1:7,15:22:39.13:604,39,0	1/1:3,16:20:42.14:668,42,0
chr10	10538190	.	AGG	A	5453.79	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=16.444;DP=794;FS=0.745;HRun=3;HaplotypeScore=107.1618;InbreedingCoeff=0.9986;MQ=85.21;MQ0=0;MQRankSum=-4.826;QD=42.94;ReadPosRankSum=-0.187;VQSLOD=4.0565;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,166,3130	0/0:8,0:8:21.07:0,21,406	0/0:29,0:29:84.28:0,84,1572	0/0:24,0:24:68.93:0,69,1262	0/0:12,0:12:33.11:0,33,636	0/0:17,0:16:51.17:0,51,954	0/0:28,0:28:81.26:0,81,1529	1/1:1,29:30:87.25:1267,87,0	0/0:29,0:29:87.29:0,87,1643	0/0:28,0:28:81.28:0,81,1564	0/0:15,0:15:45.15:0,45,868	0/0:32,0:32:93.31:0,93,1761	0/0:26,0:26:78.27:0,78,1507	0/0:30,0:30:87.28:0,87,1639	0/0:45,0:45:99:0,135,2539	0/0:33,0:33:99:0,99,1872	0/0:45,0:45:99:0,129,2479	0/0:23,0:23:66.23:0,66,1264	1/1:1,19:20:54.16:786,54,0	1/1:0,17:17:48.16:735,48,0	1/1:2,58:60:99:2665,175,0	0/0:30,0:30:84.29:0,84,1622	0/0:21,0:21:63.22:0,63,1215	0/0:31,0:31:93.32:0,93,1785	0/0:29,0:29:87.30:0,87,1680	0/0:31,0:31:90.30:0,90,1701	0/0:36,0:36:99:0,108,2077	0/0:10,0:10:30.10:0,30,568
chr10	10539848	.	TACACACACACACAC	T	12487.80	PASS	AB=0.745;AC=31;AF=0.574;AN=54;BaseQRankSum=7.957;DP=611;FS=2.719;HRun=0;HaplotypeScore=219.8583;InbreedingCoeff=0.5424;MQ=65.06;MQ0=26;MQRankSum=-8.355;QD=32.44;ReadPosRankSum=7.074;VQSLOD=3.6722;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:17,11:28:25.39:475,0,25	1/1:2,2:4:6.02:225,6,0	0/0:50,0:20:21.54:0,22,1182	0/0:51,0:18:24.08:0,24,1288	0/0:11,0:11:3.01:0,3,166	1/1:10,3:15:15.05:510,15,0	1/1:17,9:26:22.92:826,23,0	0/0:19,0:19:30.10:0,30,1760	1/1:8,12:21:36.12:1399,36,0	1/1:7,5:12:13.98:495,14,0	0/1:7,2:8:0:0,0,0	1/1:16,11:27:21.07:828,21,0	0/1:11,8:20:33.76:898,0,34	1/1:9,11:21:30.10:1162,30,0	1/1:12,19:32:45.15:1774,45,0	1/1:10,12:22:30.10:1182,30,0	0/1:23,8:32:88.34:343,0,88	0/1:14,9:22:53.54:705,0,54	0/0:10,0:11:10.59:0,11,489	0/0:10,0:10:6.02:0,6,404	0/0:43,0:49:79.80:0,80,3932	1/1:14,6:21:6.02:215,6,0	./.	1/1:13,12:25:12.98:475,13,0	0/0:10,0:10:12.04:0,12,628	1/1:28,4:32:15.02:386,15,0	1/1:7,6:14:13.44:589,13,0	0/0:4,0:4:0.89:0,1,2
chr10	10540137	.	G	GGT	2447.27	PASS	AB=0.808;AC=31;AF=0.596;AN=52;BaseQRankSum=-4.224;DP=598;FS=0.782;HRun=0;HaplotypeScore=100.4592;InbreedingCoeff=0.1502;MQ=69.29;MQ0=10;MQRankSum=1.618;QD=5.98;ReadPosRankSum=-0.693;VQSLOD=3.0374;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:34:9.73:0,10,44	0/1:6,2:8:6.56:39,0,7	./.	./.	0/0:11,0:11:5.85:0,6,46	0/0:16,0:17:8.48:0,8,41	0/0:22,0:33:2.83:0,3,78	1/1:29,0:27:7.20:46,7,0	0/0:15,0:19:11.36:0,11,56	1/1:21,5:28:11.90:156,12,0	0/1:8,1:10:34.01:36,0,34	0/1:12,5:17:50.15:119,0,50	0/1:14,2:16:50.49:111,0,50	1/1:11,0:11:12.02:152,12,0	1/1:19,6:26:8.52:133,9,0	0/1:13,6:21:8.17:39,0,8	1/1:15,11:25:18.06:268,18,0	0/1:15,8:23:7.99:288,0,8	1/1:22,0:21:20.44:169,20,0	1/1:5,0:5:5.03:31,5,0	1/1:36,0:35:14.95:148,15,0	1/1:12,6:17:9.03:132,9,0	0/0:12,0:12:6:0,6,58	0/1:16,22:39:61.74:365,0,62	1/1:17,0:16:3:25,3,0	0/1:20,6:28:7.70:229,0,8	1/1:14,0:13:5.98:46,6,0	0/1:14,0:14:5.12:81,0,5
chr10	10540491	.	G	GA	1305.13	PASS	AB=0.917;AC=9;AF=0.161;AN=56;BaseQRankSum=-8.532;DP=549;FS=1.861;HRun=9;HaplotypeScore=56.0344;InbreedingCoeff=0.8369;MQ=70.62;MQ0=2;MQRankSum=-4.728;QD=15.35;ReadPosRankSum=-3.954;VQSLOD=2.8720;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:37:91.04:0,91,767	0/0:9,0:9:23.99:0,24,208	0/0:18,0:12:26.94:0,27,226	0/0:23,0:14:16.54:0,17,134	0/0:19,0:19:47.97:0,48,416	0/0:17,0:17:35.98:0,36,312	0/0:17,0:17:35.98:0,36,312	1/1:9,22:30:13.41:584,13,0	0/0:14,0:14:32.98:0,33,286	0/0:22,0:22:47.97:0,48,417	0/0:12,0:12:29.97:0,30,260	0/0:14,0:14:29.99:0,30,260	0/0:17,0:17:41.96:0,42,360	0/0:20,0:20:50.99:0,51,443	0/0:22,0:21:50.96:0,51,443	0/0:22,0:21:53.99:0,54,469	0/0:36,0:35:92.98:0,93,807	0/0:21,1:21:5.78:0,6,272	1/1:6,6:12:20.92:208,21,0	1/1:2,5:7:12.03:133,12,0	1/1:4,20:23:48.13:531,48,0	0/1:10,1:11:7.01:7,0,180	0/0:11,0:11:17.65:0,18,156	0/0:20,1:21:14.83:0,15,357	0/0:23,0:22:50.96:0,51,437	0/0:26,0:26:62.96:0,63,547	0/0:29,0:29:70.69:0,71,622	0/0:13,0:13:35.99:0,36,312
chr10	10540658	.	TA	T	5630.18	PASS	AB=0.576;AC=39;AF=0.750;AN=52;BaseQRankSum=1.707;DP=387;FS=8.634;HRun=11;HaplotypeScore=43.8485;InbreedingCoeff=0.7981;MQ=62.12;MQ0=8;MQRankSum=-4.084;QD=17.76;ReadPosRankSum=2.362;VQSLOD=5.5223;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,32:38:83.87:690,84,0	1/1:1,6:7:20.97:172,21,0	0/0:9,0:8:20.91:0,21,180	0/0:9,0:5:8.98:0,9,81	0/0:25,1:27:44.35:0,44,652	0/1:5,13:18:7.69:257,0,8	1/1:3,15:17:14.01:270,14,0	0/0:4,0:2:4.21:0,4,23	1/1:2,8:10:17.97:148,18,0	1/1:3,19:23:58.94:470,59,0	1/1:2,3:5:8.98:74,9,0	1/1:2,11:13:26.97:222,27,0	1/1:4,17:18:47.94:394,48,0	1/1:3,6:10:17.02:129,17,0	1/1:0,15:18:51.06:387,51,0	1/1:3,17:20:44.93:369,45,0	1/1:6,15:19:38.94:320,39,0	1/1:2,6:7:14.98:123,15,0	./.	0/0:9,0:8:2.84:0,3,14	./.	1/1:1,10:12:28.99:227,29,0	1/1:1,16:17:44.95:369,45,0	1/1:4,6:8:14.98:123,15,0	0/0:10,0:10:24.05:0,24,250	1/1:5,13:17:38.94:320,39,0	1/1:1,20:21:56.92:468,57,0	1/1:0,5:5:11.99:99,12,0
chr10	10540741	.	TAC	T	4022.11	PASS	AB=0.927;AC=34;AF=0.607;AN=56;BaseQRankSum=-1.455;DP=588;FS=20.830;HRun=0;HaplotypeScore=148.6858;InbreedingCoeff=-0.0784;MQ=66.88;MQ0=9;MQRankSum=0.079;QD=9.00;ReadPosRankSum=6.022;VQSLOD=1.4090;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:34,1:35:6.60:357,0,7	0/1:13,0:13:8.89:84,0,9	0/0:57,0:26:28.79:0,29,304	0/0:65,0:37:42.19:0,42,459	0/1:24,2:26:52.75:53,0,632	1/1:17,3:20:17.11:203,17,0	1/1:19,2:21:17.99:188,18,0	0/1:17,0:17:43.11:194,0,43	1/1:23,0:23:16.45:180,16,0	0/1:24,0:24:45.63:318,0,46	1/1:11,2:13:11.90:134,12,0	1/1:13,4:17:26.56:287,27,0	0/1:14,1:15:30.08:147,0,30	1/1:19,2:21:20.48:259,20,0	0/1:14,5:19:35.81:123,0,36	1/1:18,1:19:18.04:200,18,0	0/1:10,3:13:15.42:167,0,15	0/1:9,0:8:44.12:108,0,44	0/1:15,2:17:60.11:153,0,60	0/1:16,0:16:10.53:12,0,11	0/1:23,0:23:29.19:192,0,29	0/1:15,5:19:27.16:86,0,27	1/1:12,4:16:14.82:155,15,0	1/1:15,2:17:3.31:38,3,0	0/0:17,0:17:47.88:0,48,673	0/1:18,4:19:37.14:317,0,37	1/1:8,3:11:6:69,6,0	0/0:2,0:2:6.02:0,6,76
chr10	10540749	.	C	CACACACACAG	7020.92	PASS	AB=1.000;AC=36;AF=0.643;AN=56;BaseQRankSum=1.875;DP=632;FS=28.373;HRun=0;HaplotypeScore=242.1659;InbreedingCoeff=0.0641;MQ=57.49;MQ0=16;MQRankSum=-2.016;QD=15.67;ReadPosRankSum=6.239;VQSLOD=1.8539;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:38,0:38:99:457,0,153	0/1:12,0:12:25.01:190,0,25	0/0:60,0:23:32.88:0,33,354	0/0:76,0:34:48.78:0,49,572	0/0:28,0:28:56.83:0,57,1256	0/1:18,0:18:4.06:86,0,4	0/1:21,0:21:52.92:190,0,53	1/1:24,0:24:8.49:497,8,0	1/1:23,0:23:29.46:400,29,0	1/1:28,0:28:27.43:595,27,0	1/1:13,0:13:11.76:111,12,0	1/1:19,0:18:25.08:267,25,0	0/1:17,0:17:11.90:400,0,12	1/1:18,0:18:24.92:236,25,0	1/1:17,0:17:2.49:229,2,0	0/1:17,0:17:3.36:242,0,3	1/1:14,0:14:9.50:459,10,0	0/1:11,0:10:41.18:289,0,41	1/1:16,0:16:9.52:626,10,0	1/1:3,13:17:0.46:148,0,0	1/1:24,0:25:13.60:364,14,0	0/1:21,0:20:2.43:83,0,2	0/1:17,0:18:5.55:121,0,6	0/1:22,0:21:27.05:27,0,39	0/0:20,0:20:54.14:0,54,1320	1/1:23,0:20:5:620,5,0	0/1:12,0:11:6.26:223,0,6	0/1:4,0:4:14.92:160,0,15
chr10	10540753	.	C	CACACAG	3432.95	PASS	AB=0.985;AC=28;AF=0.500;AN=56;BaseQRankSum=1.669;DP=640;FS=49.935;HRun=0;HaplotypeScore=197.4716;InbreedingCoeff=-0.3712;MQ=54.39;MQ0=16;MQRankSum=1.135;QD=7.54;ReadPosRankSum=7.444;VQSLOD=0.8787;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:37,1:38:11.35:531,11,0	0/1:11,0:11:28.03:122,0,28	0/0:59,0:22:32.88:0,33,357	0/0:73,0:30:53.55:0,54,567	0/0:28,0:28:59.84:0,60,1155	0/1:18,0:18:25.34:59,0,25	0/1:20,0:21:99:119,0,102	0/1:25,0:25:99:126,0,120	0/1:24,0:24:19.96:95,0,20	0/1:28,0:28:93.80:197,0,94	1/1:14,0:14:11.19:62,11,0	1/1:19,0:18:3.32:206,3,0	0/1:20,0:20:76.33:187,0,76	1/1:18,0:18:1.41:111,1,0	0/1:15,0:15:22.83:57,0,23	0/1:18,0:18:26.47:201,0,26	0/1:17,0:17:48.53:310,0,49	0/1:13,0:12:74.18:74,0,103	0/1:10,6:16:53.72:274,0,54	1/1:15,0:15:2.50:83,2,0	0/1:28,0:28:78.75:245,0,79	0/1:19,0:18:11.70:59,0,12	0/1:21,0:21:48.01:66,0,48	0/1:23,0:22:26.94:27,0,40	0/0:20,0:20:54.14:0,54,1070	0/1:24,0:21:93.65:208,0,94	0/1:10,0:9:13.16:13,0,48	0/0:4,0:4:11.87:0,12,82
chr10	10543011	.	CAT	C	16747.85	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=7.814;DP=562;FS=2.516;HRun=0;HaplotypeScore=75.3264;InbreedingCoeff=0.9952;MQ=89.72;MQ0=0;MQRankSum=-6.109;QD=41.35;ReadPosRankSum=9.694;VQSLOD=5.7701;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,29:29:78.26:1194,78,0	1/1:0,6:6:18.06:275,18,0	0/0:23,0:23:69.24:0,69,1304	0/0:26,0:26:66.62:0,67,1245	0/0:22,0:22:66.21:0,66,1240	1/1:0,22:22:66.22:1010,66,0	1/1:0,24:24:54.18:827,54,0	0/0:19,0:19:54.17:0,54,978	1/1:0,13:13:36.12:551,36,0	1/1:0,18:18:54.16:804,54,0	1/1:0,10:10:24.08:367,24,0	1/1:0,14:14:42.14:643,42,0	1/1:0,6:6:15.05:230,15,0	1/1:0,20:20:57.19:873,57,0	1/1:0,28:28:75.25:1148,75,0	1/1:0,23:23:69.23:1056,69,0	1/1:0,38:38:99:1744,114,0	1/1:0,37:37:96.33:1467,96,0	0/0:8,0:8:24.08:0,24,453	0/0:19,0:19:54.17:0,54,997	0/0:25,0:25:75.24:0,75,1414	1/1:0,18:18:48.16:735,48,0	1/1:0,10:10:30.10:459,30,0	1/1:0,30:30:75.25:1148,75,0	0/0:15,0:15:42.14:0,42,799	1/1:0,24:24:72.22:1079,72,0	1/1:0,19:19:38.99:587,39,0	1/1:3,13:16:36.12:551,36,0
chr10	10544341	.	A	ATGTGTGTG	20105.45	PASS	AB=0.816;AC=47;AF=0.839;AN=56;BaseQRankSum=-4.912;DP=747;FS=21.241;HRun=0;HaplotypeScore=224.7941;InbreedingCoeff=0.7665;MQ=56.75;MQ0=5;MQRankSum=-7.178;QD=31.27;ReadPosRankSum=-0.459;VQSLOD=2.5781;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:36:15.78:285,16,0	1/1:10,0:11:6:76,6,0	0/0:33,0:18:15.04:0,15,237	0/0:25,0:21:8.26:0,8,260	0/0:31,0:31:72.70:0,73,1769	1/1:11,4:18:15.05:563,15,0	1/1:21,15:41:45.61:1626,46,0	1/1:33,0:33:30.10:925,30,0	1/1:11,16:29:42.14:1747,42,0	1/1:12,14:29:63.19:1871,63,0	1/1:19,12:30:16.47:626,16,0	1/1:16,11:31:36.12:1368,36,0	1/1:7,9:17:17.74:743,18,0	1/1:10,13:24:20.76:872,21,0	1/1:21,20:45:45.63:1813,46,0	1/1:12,20:35:51.18:1962,51,0	1/1:9,8:19:18.06:680,18,0	1/1:6,4:13:12.04:501,12,0	1/1:13,0:18:24.08:586,24,0	1/1:13,0:24:7.73:312,8,0	0/1:31,1:40:0.01:0,0,0	1/1:22,4:25:2.97:125,3,0	1/1:15,9:26:5.98:250,6,0	1/1:15,8:26:2.85:64,3,0	0/0:15,0:15:32.73:0,33,818	1/1:19,10:33:54.13:1638,54,0	1/1:13,14:27:24.08:1000,24,0	1/1:5,4:10:12.04:472,12,0
chr10	10544614	.	CAA	C	301.99	PASS	AB=0.818;AC=7;AF=0.125;AN=56;BaseQRankSum=5.218;DP=442;FS=0.985;HRun=13;HaplotypeScore=59.2795;InbreedingCoeff=0.6452;MQ=49.42;MQ0=15;MQRankSum=-0.770;QD=7.95;ReadPosRankSum=2.374;VQSLOD=0.3353;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:68.55:0,69,894	0/0:4,0:5:14.49:0,14,158	0/0:3,0:2:2.96:0,3,28	0/0:12,0:3:7.67:0,8,54	0/0:26,0:26:57.39:0,57,588	0/0:19,0:18:32.21:0,32,326	0/0:19,0:20:44.58:0,45,564	0/1:7,2:7:34.47:49,0,34	0/0:17,0:16:33.10:0,33,453	0/0:19,0:18:40.71:0,41,509	0/0:22,0:21:46.38:0,46,562	0/0:13,0:11:26.62:0,27,324	0/0:12,0:12:20.90:0,21,270	0/0:10,0:10:19.62:0,20,193	0/0:14,0:13:21.06:0,21,283	0/0:11,0:12:23.35:0,23,253	0/0:25,0:24:61.50:0,62,819	0/0:19,0:19:38.62:0,39,521	1/1:2,5:6:15.01:145,15,0	1/1:8,7:13:0.72:149,1,0	1/1:3,4:6:9:87,9,0	0/0:13,0:15:23.84:0,24,265	0/0:15,0:15:28.29:0,28,343	0/0:10,0:14:31.35:0,31,327	0/0:14,0:13:31.37:0,31,351	0/0:33,0:29:62.45:0,62,722	0/0:12,0:12:26.53:0,27,324	0/0:14,0:13:25.12:0,25,244
chr10	10544994	.	GTCTC	G	612.08	PASS	AB=0.935;AC=9;AF=0.173;AN=52;BaseQRankSum=5.390;DP=470;FS=27.405;HRun=0;HaplotypeScore=108.0258;InbreedingCoeff=-0.0642;MQ=43.45;MQ0=33;MQRankSum=-4.856;QD=5.14;ReadPosRankSum=-2.402;VQSLOD=-0.2718;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:44:67.06:0,67,1531	0/0:4,0:4:9.03:0,9,200	./.	./.	1/1:14,0:12:2.04:6,2,0	0/0:28,0:28:36.12:0,36,913	0/0:29,0:23:32.69:0,33,661	0/1:15,10:22:39.02:367,0,39	0/0:11,0:9:0:0,0,0	0/1:8,1:7:37.29:37,0,147	0/1:7,0:6:7.74:8,0,13	0/1:13,0:12:21.78:22,0,39	0/1:14,0:13:21.93:22,0,32	0/0:23,0:23:39.13:0,39,971	0/1:12,0:10:32.97:71,0,33	0/0:19,0:18:24.06:0,24,698	0/0:21,0:21:24.08:0,24,631	0/0:10,0:10:5.79:0,6,56	0/0:25,0:21:51.14:0,51,1054	0/0:15,0:11:21.02:0,21,468	0/0:41,0:39:99:0,105,2246	0/0:9,0:9:2.01:0,2,26	0/0:5,0:4:0.15:0,0,28	0/0:35,0:34:84.27:0,84,2083	0/0:6,0:5:6.01:0,6,62	0/1:17,0:12:74.96:203,0,75	0/0:12,0:11:20.83:0,21,321	0/0:11,0:9:2.67:0,3,59
chr10	10544998	.	C	CTCTG	4228.26	PASS	AB=0.976;AC=26;AF=0.500;AN=52;BaseQRankSum=-1.508;DP=490;FS=4.138;HRun=0;HaplotypeScore=97.3320;InbreedingCoeff=0.7159;MQ=43.54;MQ0=34;MQRankSum=-7.223;QD=22.14;ReadPosRankSum=0.646;VQSLOD=3.9915;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:45:70.40:0,70,1202	0/0:4,0:4:9.03:0,9,162	./.	./.	1/1:4,9:11:3.01:78,3,0	0/0:26,0:26:35.86:0,36,671	0/0:26,0:21:29.67:0,30,500	0/1:34,0:22:2.35:751,0,2	0/0:2,9:9:0:0,0,0	1/1:5,4:7:15.05:378,15,0	1/1:1,6:6:6.02:160,6,0	1/1:2,11:12:5.97:162,6,0	1/1:0,14:16:15.05:388,15,0	0/0:24,0:24:41.86:0,42,748	1/1:2,12:14:12.04:324,12,0	0/1:19,1:19:47.12:47,0,513	0/0:23,0:23:30.06:0,30,502	1/1:2,7:10:15.05:357,15,0	0/0:26,0:21:51.17:0,51,884	0/0:16,0:12:23.98:0,24,377	0/0:43,0:41:99:0,102,1756	1/1:2,8:10:6.02:158,6,0	1/1:3,2:4:6.02:161,6,0	0/0:38,0:36:90.22:0,90,1584	1/1:3,4:6:6.02:161,6,0	1/1:4,13:14:42.05:871,42,0	0/0:12,0:11:20.79:0,21,298	1/1:3,7:8:9.03:233,9,0
chr10	10545010	.	GTC	G	344.17	PASS	AB=0.984;AC=13;AF=0.250;AN=52;BaseQRankSum=6.350;DP=493;FS=10.836;HRun=0;HaplotypeScore=101.2452;InbreedingCoeff=0.2067;MQ=43.42;MQ0=30;MQRankSum=-5.539;QD=2.63;ReadPosRankSum=-3.217;VQSLOD=0.1819;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:45:72.23:0,72,1232	0/0:4,0:4:9.03:0,9,145	./.	./.	1/1:9,0:5:3.01:38,3,0	0/0:30,0:30:45.15:0,45,789	0/0:26,0:20:24.08:0,24,415	0/1:35,5:31:99:104,0,891	0/0:13,0:11:9.03:0,9,153	0/0:11,0:10:27.49:0,27,363	1/1:6,0:5:6:63,6,0	0/0:12,0:11:5.95:0,6,72	0/1:16,0:15:15.62:16,0,148	0/0:25,0:25:42.14:0,42,728	0/0:15,0:13:11.97:0,12,178	0/0:17,0:16:4.52:0,5,503	0/0:25,0:24:33.11:0,33,577	0/1:8,0:8:40.68:84,0,41	0/0:24,0:20:54.18:0,54,924	0/0:20,0:16:27.05:0,27,445	0/0:38,1:35:93.30:0,93,1596	1/1:9,0:8:5.05:44,5,0	0/1:6,0:5:5.05:35,0,5	0/0:40,0:38:93.32:0,93,1626	0/1:8,0:7:3.72:5,0,4	0/1:21,0:17:36.09:36,0,578	0/0:12,0:11:24.08:0,24,381	0/1:8,0:6:28.43:68,0,28
chr10	10545092	.	C	CTCTGTGTGTGTG	4319.66	PASS	AB=1.000;AC=34;AF=0.607;AN=56;BaseQRankSum=-6.712;DP=629;FS=12.568;HRun=0;HaplotypeScore=369.4335;InbreedingCoeff=-0.3613;MQ=40.53;MQ0=15;MQRankSum=-3.382;QD=7.27;ReadPosRankSum=-6.437;VQSLOD=1.3428;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:51,0:50:99:130,0,1739	0/1:22,0:21:61.50:62,0,246	0/0:18,0:9:26.54:0,27,599	0/1:17,0:9:18.94:19,0,343	0/1:28,0:25:13.41:95,0,13	0/1:25,0:25:48.16:48,0,457	0/1:22,0:21:26.16:26,0,689	1/1:15,0:11:22.70:176,23,0	0/1:11,0:11:64.57:192,0,65	1/1:11,1:28:66.22:1332,66,0	0/1:16,0:14:3.24:3,0,25	1/1:8,0:6:5.70:33,6,0	1/1:20,0:20:23.33:511,23,0	0/1:21,0:20:4.53:5,0,462	1/1:13,0:12:3.48:69,3,0	0/1:23,0:24:39.73:40,0,988	0/1:31,0:32:14.69:15,0,1721	1/1:3,7:12:2.64:186,3,0	0/1:19,0:17:99:226,0,407	0/1:27,0:27:31.64:32,0,353	0/1:47,0:42:99:216,0,1474	0/1:13,0:13:11.08:14,0,11	0/0:11,4:17:2.47:0,2,14	0/1:38,0:37:99:117,0,1349	0/1:22,0:20:8.38:16,0,8	1/1:22,0:21:16.70:722,17,0	0/1:26,0:25:37.43:37,0,938	1/1:9,0:9:0.47:1,0,0
chr10	10545714	.	CATCTATCTATCTATCT	C	7122.21	PASS	AB=0.650;AC=31;AF=0.646;AN=48;BaseQRankSum=5.062;DP=551;FS=6.281;HRun=0;HaplotypeScore=211.6163;InbreedingCoeff=0.7807;MQ=59.56;MQ0=6;MQRankSum=-6.817;QD=22.75;ReadPosRankSum=0.830;VQSLOD=3.1195;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:25,8:32:35.48:733,35,0	1/1:3,5:8:15.05:388,15,0	0/0:9,0:9:6.91:0,7,170	0/0:16,0:14:6.02:0,6,197	0/0:24,0:24:54.17:0,54,2698	1/1:4,17:20:12.04:292,12,0	./.	0/0:38,0:37:60.18:0,60,1332	1/1:10,16:26:9.03:219,9,0	1/1:11,0:11:20.92:678,21,0	./.	1/1:5,13:18:21.07:626,21,0	1/1:6,15:21:8.71:179,9,0	1/1:4,11:15:3.01:131,3,0	1/1:13,4:17:29.90:397,30,0	1/1:8,19:27:15.05:416,15,0	1/1:25,2:27:32.98:560,33,0	0/1:6,7:13:68.56:225,0,69	0/0:19,0:17:26.30:0,26,1052	0/0:24,0:24:57.67:0,58,2711	0/0:18,0:17:21.10:0,21,963	./.	./.	1/1:4,9:13:3.01:106,3,0	0/0:12,0:12:30.10:0,30,1714	1/1:21,0:21:27.05:606,27,0	1/1:4,17:21:14.55:635,15,0	1/1:15,6:20:33.11:931,33,0
chr10	10545734	.	TATCTATCTATCTATCTATCC	T	7187.92	PASS	AB=0.946;AC=16;AF=0.296;AN=54;BaseQRankSum=-1.555;DP=555;FS=1.524;HRun=0;HaplotypeScore=269.6754;InbreedingCoeff=-0.4243;MQ=45.39;MQ0=10;MQRankSum=-6.569;QD=22.12;ReadPosRankSum=4.554;VQSLOD=3.4864;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:32,0:31:18.08:732,0,18	0/1:11,0:11:99:379,0,126	0/0:4,0:4:6.02:0,6,169	0/0:5,0:4:6.02:0,6,197	0/0:28,0:27:66.20:0,66,3480	0/1:22,0:21:63.36:327,0,63	0/0:13,0:12:1.36:0,1,3	0/0:36,0:33:46.53:0,47,1843	0/1:24,0:24:99:194,0,158	0/1:1,9:10:10.55:699,0,11	./.	0/1:19,0:19:99:628,0,104	0/1:24,0:23:99:158,0,151	0/1:20,0:19:99:112,0,203	0/1:15,0:14:21.73:361,0,22	0/1:25,0:25:99:405,0,134	0/1:24,0:24:60.54:552,0,61	0/1:11,0:11:40.66:266,0,41	0/0:21,0:17:16.81:0,17,1244	0/0:27,0:27:57.67:0,58,3178	0/0:17,0:16:21.84:0,22,1123	0/0:7,14:20:9.43:0,9,108	0/0:7,22:29:9.48:0,9,113	0/1:17,0:17:99:114,0,161	0/0:14,0:14:42.14:0,42,2335	0/1:8,13:21:99:710,0,257	0/1:28,0:27:99:660,0,204	0/1:22,0:21:99:889,0,241
chr10	10545766	.	CATCCATCCATCTATCT	C	1592.52	PASS	AB=1.000;AC=12;AF=0.222;AN=54;BaseQRankSum=-2.071;DP=624;FS=10.218;HRun=0;HaplotypeScore=357.3339;InbreedingCoeff=0.0981;MQ=45.45;MQ0=8;MQRankSum=-1.731;QD=7.69;ReadPosRankSum=-0.232;VQSLOD=0.1775;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:26:12.21:0,12,1550	0/1:12,0:12:5.51:6,0,559	0/0:2,0:1:3.01:0,3,76	./.	0/0:41,0:40:96.30:0,96,3672	0/0:28,0:27:33.74:0,34,786	0/0:19,0:17:19.36:0,19,252	1/1:4,30:32:86.99:1077,87,0	0/0:21,0:21:26.77:0,27,834	0/1:18,0:17:16.42:16,0,717	0/0:21,0:20:18.52:0,19,272	0/1:24,0:24:9.29:9,0,1090	0/0:23,0:22:28.91:0,29,841	0/0:21,0:20:3.33:0,3,874	0/0:21,0:20:42.52:0,43,1086	0/0:28,0:28:12.93:0,13,1036	0/0:21,0:21:26.84:0,27,723	0/1:9,0:9:24.58:25,0,71	1/1:7,10:16:5.72:409,6,0	0/1:26,0:26:60.19:152,0,60	0/1:13,0:12:6.72:7,0,17	0/0:31,0:30:33.58:0,34,934	0/0:35,0:34:28.41:0,28,638	0/0:19,0:19:25:0,25,790	0/0:24,0:24:66.16:0,66,2645	0/0:34,0:34:44.66:0,45,2194	0/1:35,0:34:19.75:20,0,1224	0/1:19,0:18:22.60:23,0,869
chr10	10545949	.	CAA	C	6271.89	PASS	AB=0.641;AC=41;AF=0.732;AN=56;BaseQRankSum=-8.067;DP=512;FS=4.069;HRun=14;HaplotypeScore=73.7888;InbreedingCoeff=0.7501;MQ=58.30;MQ0=18;MQRankSum=-0.174;QD=15.19;ReadPosRankSum=4.454;VQSLOD=4.2087;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,29:31:74.86:694,75,0	1/1:1,5:8:13.13:128,13,0	0/0:23,0:11:23.57:0,24,232	0/0:14,0:10:11.91:0,12,190	0/0:17,0:17:38.56:0,39,491	1/1:5,13:19:44.58:393,45,0	1/1:1,11:14:29.88:319,30,0	0/1:9,3:26:34.58:35,0,111	1/1:5,7:11:17.75:166,18,0	1/1:11,8:20:17.76:213,18,0	1/1:3,10:13:23.98:222,24,0	1/1:1,19:20:51.01:472,51,0	1/1:3,11:14:14.85:185,15,0	1/1:8,12:20:44.75:408,45,0	1/1:1,12:11:30.03:278,30,0	1/1:1,14:17:26.79:344,27,0	1/1:6,21:26:59.80:539,60,0	1/1:9,12:19:35.72:317,36,0	0/1:12,2:26:2.26:2,0,203	0/0:3,0:22:40.79:0,41,173	0/0:3,0:5:12.95:0,13,55	1/1:5,15:18:41.99:389,42,0	1/1:6,8:13:20.93:184,21,0	1/1:4,9:12:20.76:178,21,0	0/0:12,0:12:17.55:0,18,219	1/1:6,17:21:48.01:444,48,0	1/1:7,13:18:26.91:244,27,0	0/1:6,5:10:8.59:118,0,9
chr10	10546587	.	TCAATG	T	18657.11	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=6.520;DP=536;FS=1.041;HRun=0;HaplotypeScore=109.0933;InbreedingCoeff=0.9873;MQ=86.96;MQ0=0;MQRankSum=-9.546;QD=42.12;ReadPosRankSum=5.634;VQSLOD=4.9348;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,29:32:69.19:1340,69,0	1/1:1,4:5:12.04:240,12,0	0/0:25,0:25:57.05:0,57,1427	0/0:24,0:24:54.15:0,54,1405	0/0:22,0:22:48.16:0,48,1432	1/1:1,19:20:45.11:859,45,0	1/1:4,17:21:42.14:817,42,0	1/1:7,22:29:60.19:1147,60,0	1/1:4,18:22:42.14:839,42,0	1/1:1,12:13:36.12:708,36,0	1/1:2,16:18:45.15:899,45,0	1/1:3,11:14:21.07:420,21,0	1/1:2,12:14:33.11:659,33,0	1/1:1,9:10:21.03:380,21,0	1/1:3,16:19:42.14:840,42,0	1/1:4,18:22:42.14:840,42,0	1/1:3,18:21:48.16:959,48,0	1/1:2,20:22:39.13:780,39,0	1/1:5,14:19:39.11:739,39,0	1/1:3,14:17:39.13:779,39,0	1/1:2,11:13:24.04:440,24,0	1/1:3,19:22:54.19:1079,54,0	1/1:5,16:21:38.81:779,39,0	1/1:3,13:16:39.13:754,39,0	0/0:22,0:22:57.19:0,57,1606	1/1:3,16:20:51.18:1020,51,0	1/1:5,18:23:48.16:959,48,0	1/1:0,10:10:21.04:381,21,0
chr10	10546761	.	C	CTTT	5143.46	PASS	AB=0.891;AC=34;AF=0.654;AN=52;BaseQRankSum=1.882;DP=375;FS=0.000;HRun=1;HaplotypeScore=180.4057;InbreedingCoeff=-0.4646;MQ=27.74;MQ0=21;MQRankSum=1.672;QD=13.86;ReadPosRankSum=1.025;VQSLOD=1.3887;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:7,5:12:10.39:147,0,10	0/1:9,0:9:33.61:225,0,34	./.	./.	1/1:7,0:7:9.84:64,10,0	0/1:13,4:17:67.47:393,0,67	0/1:12,0:12:13.92:34,0,14	1/1:5,0:3:1.41:33,1,0	0/1:17,1:18:99:132,0,117	0/1:27,3:27:49.54:466,0,50	0/1:20,2:21:6.58:250,0,7	0/1:13,0:12:24.70:25,0,105	0/1:13,1:13:65.11:140,0,65	0/1:5,4:9:20.14:151,0,20	0/1:15,0:13:83.36:94,0,83	0/1:13,1:14:99:185,0,107	1/1:11,2:11:13.31:224,13,0	0/1:7,1:6:15.47:36,0,15	0/0:4,0:2:3.01:0,3,38	1/1:6,0:5:3.47:29,3,0	1/1:9,0:4:2.67:38,3,0	1/1:29,5:33:31.31:557,31,0	0/1:23,2:25:89.90:289,0,90	1/1:9,0:9:8.84:84,9,0	1/1:7,1:7:4.33:172,4,0	0/1:13,6:19:21.49:453,0,21	1/1:14,4:17:10.80:341,11,0	0/1:20,5:22:75.61:580,0,76
chr10	10546765	.	T	TTTTTC	1866.38	PASS	AB=0.921;AC=21;AF=0.404;AN=52;BaseQRankSum=-0.169;DP=332;FS=0.000;HRun=0;HaplotypeScore=193.0534;InbreedingCoeff=-0.5697;MQ=27.90;MQ0=13;MQRankSum=1.821;QD=6.84;ReadPosRankSum=0.887;VQSLOD=2.0313;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:8,1:9:16.36:16,0,142	0/1:6,2:8:48.59:271,0,49	./.	./.	0/1:6,0:6:5:5,0,15	0/1:12,3:15:99:149,0,174	0/1:11,0:11:54.02:54,0,104	1/1:4,0:3:2.57:13,3,0	0/0:14,0:14:22.50:0,23,192	0/1:29,0:26:95.34:95,0,536	0/1:18,1:19:54.44:54,0,116	0/1:10,1:10:63.64:64,0,89	0/1:11,3:13:99:117,0,156	0/1:9,0:9:13.89:14,0,87	0/1:9,2:10:60.60:78,0,61	0/1:9,3:12:99:216,0,154	0/0:11,0:10:18.44:0,18,156	0/0:7,0:5:11.97:0,12,142	0/0:4,0:2:3.01:0,3,43	0/1:5,0:5:14.80:32,0,15	0/0:7,0:4:6:0,6,58	0/1:25,3:27:99:143,0,214	0/1:25,0:25:25.43:25,0,227	0/1:5,1:6:19.95:50,0,20	0/1:8,0:7:39.54:40,0,79	0/1:16,2:18:99:233,0,277	0/0:15,1:16:11.01:0,11,204	0/1:24,1:22:99:346,0,241
chr10	10547536	.	T	TTCC	9288.24	PASS	AB=0.782;AC=47;AF=0.870;AN=54;BaseQRankSum=-1.457;DP=490;FS=3.649;HRun=0;HaplotypeScore=103.5226;InbreedingCoeff=0.1099;MQ=43.05;MQ0=19;MQRankSum=-0.736;QD=21.45;ReadPosRankSum=0.841;VQSLOD=4.8439;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,14:20:6.64:358,7,0	1/1:3,0:3:5.23:41,5,0	0/1:25,0:6:8.70:9,0,182	0/0:43,0:8:8.15:0,8,169	0/1:8,1:9:59.02:59,0,94	1/1:2,15:18:14.62:215,15,0	1/1:1,16:17:15.05:315,15,0	1/1:11,0:9:6.91:84,7,0	1/1:4,13:18:17.70:328,18,0	1/1:7,30:36:77.22:1248,77,0	1/1:12,17:30:52.90:799,53,0	1/1:4,8:12:7.47:245,7,0	1/1:4,16:20:27.57:631,28,0	0/1:4,5:9:10.05:177,0,10	1/1:5,14:19:11.95:208,12,0	1/1:4,13:17:11.95:501,12,0	0/1:2,3:6:11.95:31,0,12	1/1:6,2:8:24.06:389,24,0	1/1:5,6:6:18.03:282,18,0	1/1:5,12:17:22.78:307,23,0	1/1:13,1:14:13.03:227,13,0	1/1:8,12:20:32.78:414,33,0	1/1:4,14:18:11.82:198,12,0	./.	0/1:12,1:15:99:106,0,317	1/1:13,27:41:81.60:1472,82,0	1/1:5,10:15:36.08:588,36,0	1/1:2,0:2:5.95:56,6,0
chr10	10547606	.	C	CT	604.45	PASS	AB=0.887;AC=14;AF=0.259;AN=54;BaseQRankSum=10.193;DP=551;FS=49.383;HRun=0;HaplotypeScore=111.9088;InbreedingCoeff=-0.3300;MQ=57.46;MQ0=2;MQRankSum=-8.898;QD=2.12;ReadPosRankSum=1.218;VQSLOD=0.9786;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,1:35:50.20:0,50,1028	0/1:9,1:10:3.89:4,0,316	0/0:25,0:14:18.03:0,18,247	0/0:30,0:19:48.04:0,48,609	0/1:9,2:12:93.87:94,0,225	0/0:18,0:18:21.06:0,21,275	0/1:13,0:13:6.85:7,0,463	0/0:10,0:10:18.02:0,18,194	0/1:27,2:29:24.88:25,0,654	0/1:19,5:24:99:170,0,617	0/1:15,8:23:99:209,0,446	0/0:17,0:17:42.10:0,42,535	0/1:24,2:26:0.57:1,0,802	0/0:12,1:13:1.45:0,1,465	0/0:29,2:31:6.94:0,7,883	0/1:20,3:23:58.54:59,0,581	0/0:18,0:18:42.14:0,42,587	0/0:11,0:11:33.07:0,33,439	0/0:7,0:7:21.05:0,21,275	0/1:8,2:10:32.35:32,0,153	0/0:20,0:20:42.14:0,42,586	0/1:17,2:19:3.92:4,0,402	0/1:19,3:22:63.85:64,0,305	0/0:30,0:30:69.23:0,69,959	0/1:13,1:14:33.89:34,0,460	0/1:33,3:36:26.01:26,0,1056	0/1:22,2:24:19.33:19,0,672	./.
chr10	10548217	.	ATTTG	A	4081.84	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=12.365;DP=698;FS=6.129;HRun=0;HaplotypeScore=109.6657;InbreedingCoeff=0.9525;MQ=67.46;MQ0=1;MQRankSum=0.905;QD=31.40;ReadPosRankSum=-0.804;VQSLOD=3.1703;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:57.16:0,57,1234	0/0:9,0:9:27.02:0,27,612	0/0:26,0:23:48.12:0,48,1078	0/0:20,0:19:45.13:0,45,916	0/0:27,0:27:57.18:0,57,1351	0/0:18,0:18:51.16:0,51,1198	0/0:26,1:27:18.35:0,18,1545	1/1:13,17:30:51.07:704,51,0	0/0:20,0:20:48.15:0,48,1122	0/0:30,0:30:69.22:0,69,1569	0/0:26,0:26:66.14:0,66,1536	0/0:21,0:21:54.17:0,54,1293	0/0:14,0:14:39.12:0,39,924	0/0:22,0:22:54.17:0,54,1270	0/0:39,0:39:99:0,99,2323	0/0:30,0:30:75.21:0,75,1696	0/0:31,0:31:84.27:0,84,1991	0/0:23,1:24:3.28:0,3,1222	1/1:8,14:22:39.08:564,39,0	1/1:6,33:39:85.46:1439,85,0	1/1:4,35:39:81.28:1374,81,0	0/0:21,0:21:54.17:0,54,1268	0/0:29,0:29:69.14:0,69,1615	0/0:19,0:19:45.15:0,45,1122	0/0:17,0:17:39.13:0,39,952	0/0:22,0:22:51.16:0,51,1224	0/0:31,0:30:81.26:0,81,1905	0/0:22,0:22:51.15:0,51,1222
chr10	10548341	.	AC	A	1267.68	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.194;DP=627;FS=1.369;HRun=2;HaplotypeScore=57.7343;InbreedingCoeff=0.9381;MQ=77.96;MQ0=0;MQRankSum=-3.928;QD=32.50;ReadPosRankSum=2.200;VQSLOD=3.4892;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,39:39:99:1363,105,0	0/0:7,0:7:18.06:0,18,269	0/0:24,0:24:71.82:0,72,963	0/0:16,0:16:44.97:0,45,649	0/0:21,0:21:63.20:0,63,923	0/0:24,0:24:69.22:0,69,1003	0/0:28,0:28:84.27:0,84,1239	0/0:24,0:24:69.19:0,69,959	0/0:21,0:21:60.18:0,60,876	0/0:16,0:16:48.16:0,48,719	0/0:19,0:19:54.17:0,54,788	0/0:20,0:20:60.20:0,60,899	0/0:24,0:24:72.24:0,72,1076	0/0:28,0:28:84.28:0,84,1257	0/0:28,0:28:84.28:0,84,1258	0/0:23,0:23:69.19:0,69,957	0/0:26,0:26:78.21:0,78,1089	0/0:17,0:17:51.17:0,51,763	0/0:19,0:19:57.16:0,57,797	0/0:19,0:19:57.16:0,57,803	0/0:33,0:33:87.24:0,87,1257	0/0:27,0:27:78.25:0,78,1144	0/0:23,0:23:66.22:0,66,982	0/0:17,0:16:51.17:0,51,764	0/0:25,0:25:72.22:0,72,1040	0/0:30,0:30:87.28:0,87,1282	0/0:26,0:26:78.25:0,78,1149	0/0:3,0:3:9.03:0,9,135
chr10	10548627	.	G	GCACACA	11477.21	PASS	AB=0.749;AC=43;AF=0.768;AN=56;BaseQRankSum=-0.606;DP=1001;FS=2.344;HRun=0;HaplotypeScore=267.7541;InbreedingCoeff=0.5201;MQ=59.83;MQ0=10;MQRankSum=-4.741;QD=13.79;ReadPosRankSum=-1.482;VQSLOD=3.8354;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:21,0:54:17.33:370,0,17	1/1:3,5:10:2.95:73,3,0	0/1:37,0:20:9:9,0,31	0/0:43,0:24:2.74:0,3,99	0/0:15,0:29:12.66:0,13,250	0/0:20,0:26:57.19:0,57,1073	0/0:36,0:41:90.08:0,90,1506	1/1:37,0:37:49.15:562,49,0	0/1:23,0:57:1.83:668,0,2	1/1:18,15:38:52.65:1408,53,0	1/1:9,7:21:2.26:96,2,0	1/1:17,26:52:35.74:746,36,0	1/1:11,20:35:30.10:711,30,0	1/1:16,18:42:29.74:508,30,0	1/1:19,17:48:0.19:750,0,0	1/1:15,19:43:23.65:483,24,0	1/1:20,12:37:26.29:601,26,0	1/1:16,11:32:24.95:723,25,0	1/1:21,0:20:35.96:580,36,0	1/1:18,0:18:3.01:38,3,0	1/1:52,1:53:5.49:34,5,0	1/1:11,17:34:5.28:76,5,0	1/1:13,12:28:10.81:249,11,0	1/1:31,21:58:26.01:343,26,0	0/0:13,0:29:16.33:0,16,257	1/1:16,16:39:79.31:1670,79,0	1/1:9,11:27:29.28:594,29,0	1/1:7,1:7:6.02:185,6,0
chr10	10548655	.	A	ACACACACG	5567.75	PASS	AB=0.973;AC=24;AF=0.429;AN=56;BaseQRankSum=8.335;DP=1042;FS=11.215;HRun=0;HaplotypeScore=300.5453;InbreedingCoeff=-0.3079;MQ=53.72;MQ0=10;MQRankSum=-4.942;QD=6.93;ReadPosRankSum=4.979;VQSLOD=1.9845;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:47,0:47:34.65:35,0,299	0/1:8,0:8:16.49:16,0,38	0/0:29,0:12:2.64:0,3,156	0/0:42,0:19:19.04:0,19,322	0/0:26,0:26:65.82:0,66,837	0/0:28,0:27:72.18:0,72,1723	0/0:45,0:45:99:0,132,2497	1/1:55,0:55:99:1283,135,0	0/1:60,0:60:52.13:52,0,583	0/1:41,0:40:99:456,0,409	0/1:17,0:17:40.48:42,0,40	0/1:58,0:58:99:238,0,292	0/1:27,0:27:99:268,0,127	0/1:48,0:48:99:118,0,354	0/1:49,0:49:99:286,0,268	0/1:38,0:38:99:156,0,127	0/1:33,0:32:99:155,0,139	0/1:27,0:27:99:342,0,104	1/1:5,16:31:70.75:1103,71,0	1/1:2,17:25:5.41:45,5,0	0/1:5,45:76:0.51:62,0,1	0/0:40,0:40:35.18:0,35,379	0/1:28,0:28:25.96:26,0,173	0/1:52,0:51:22.83:23,0,110	0/0:28,0:28:48.49:0,48,708	0/1:44,0:43:99:566,0,330	0/1:32,0:32:99:213,0,275	0/1:6,0:5:13.49:82,0,13
chr10	10549608	.	A	AGTGTGTGTGTGTGT	23232.39	PASS	AB=0.845;AC=46;AF=0.821;AN=56;BaseQRankSum=-2.716;DP=781;FS=8.038;HRun=0;HaplotypeScore=290.1228;InbreedingCoeff=0.5815;MQ=61.18;MQ0=8;MQRankSum=-7.102;QD=35.31;ReadPosRankSum=-0.285;VQSLOD=2.8093;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:32,0:31:11.86:294,12,0	1/1:5,7:12:17.98:1141,18,0	0/0:47,0:28:3.59:0,4,373	0/1:43,0:28:4.76:5,0,424	0/0:31,0:32:71.17:0,71,2314	1/1:18,0:18:6.95:209,7,0	1/1:35,0:34:30.12:699,30,0	1/1:45,0:44:90.18:1855,90,0	1/1:10,0:25:4.39:363,4,0	1/1:13,19:37:84.68:3034,85,0	1/1:10,7:16:3.48:203,3,0	1/1:12,8:24:17.59:1011,18,0	1/1:14,14:33:33.96:1574,34,0	1/1:12,11:24:11.73:807,12,0	1/1:13,15:33:27.03:1442,27,0	1/1:7,15:28:45.06:2602,45,0	1/1:9,12:21:3.57:309,4,0	1/1:9,1:19:15.05:591,15,0	1/1:12,1:19:39.13:1405,39,0	0/0:11,0:20:0.47:0,0,1	1/1:36,0:36:27.40:476,27,0	0/1:16,13:28:0:1,0,0	1/1:12,13:26:3.06:202,3,0	1/1:16,11:31:3.01:63,3,0	0/0:24,0:24:39.13:0,39,1525	1/1:18,13:31:57.12:2353,57,0	1/1:13,15:29:26.96:1701,27,0	1/1:5,4:9:15.05:892,15,0
chr10	10551125	.	A	AC	2239.79	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-10.751;DP=544;FS=5.156;HRun=1;HaplotypeScore=53.2183;InbreedingCoeff=0.8906;MQ=83.18;MQ0=0;MQRankSum=-4.255;QD=43.07;ReadPosRankSum=0.868;VQSLOD=3.8138;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,52:52:99:2335,157,0	0/0:6,0:6:18.06:0,18,234	0/0:17,0:17:45.52:0,46,536	0/0:15,0:15:45.14:0,45,573	0/0:10,0:10:27.09:0,27,350	0/0:14,0:14:39.13:0,39,506	0/0:21,0:21:63.20:0,63,817	0/0:20,0:20:54.13:0,54,680	0/0:23,0:23:69.21:0,69,881	0/0:20,0:20:60.19:0,60,778	0/0:12,0:12:36.12:0,36,467	0/0:22,0:22:63.20:0,63,814	0/0:15,0:15:42.11:0,42,529	0/0:14,0:14:42.14:0,42,544	0/0:12,0:12:33.07:0,33,410	0/0:13,0:13:36.12:0,36,466	0/0:32,0:32:96.31:0,96,1245	0/0:28,0:28:84.27:0,84,1090	0/0:24,0:24:66.17:0,66,837	0/0:11,0:11:33.11:0,33,424	0/0:59,0:59:99:0,169,2181	0/0:21,0:21:57.16:0,57,723	0/0:10,0:10:21.07:0,21,273	0/0:23,0:23:66.21:0,66,857	0/0:15,0:15:45.15:0,45,582	0/0:25,0:25:69.22:0,69,896	0/0:8,0:8:21.07:0,21,272	0/0:2,0:2:6.02:0,6,78
chr10	10552157	.	CT	C	4794.75	PASS	AB=0.673;AC=37;AF=0.661;AN=56;BaseQRankSum=6.580;DP=532;FS=28.569;HRun=12;HaplotypeScore=71.8227;InbreedingCoeff=0.7399;MQ=81.42;MQ0=0;MQRankSum=0.061;QD=13.58;ReadPosRankSum=5.348;VQSLOD=2.9584;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,2:38:67.65:0,68,801	1/1:3,3:6:8.95:70,9,0	0/0:26,0:20:8.99:0,9,124	0/0:16,0:13:11.06:0,11,73	0/0:21,0:22:14.78:0,15,292	0/1:2,18:20:10.07:297,0,10	0/1:2,11:13:0.56:179,0,1	0/0:24,0:25:53.89:0,54,501	1/1:1,13:14:23.90:186,24,0	1/1:7,18:26:54.47:418,54,0	1/1:5,15:20:35.57:278,36,0	1/1:4,7:11:23.89:183,24,0	1/1:5,10:15:23.75:185,24,0	1/1:4,11:16:28.80:215,29,0	1/1:3,14:17:8.95:207,9,0	1/1:3,16:20:37.50:284,37,0	1/1:3,20:23:44.82:348,45,0	1/1:3,15:19:28.90:210,29,0	0/0:8,0:8:20.91:0,21,196	0/1:18,1:19:10.34:10,0,257	0/0:26,0:27:6.77:0,7,456	1/1:5,7:12:26.78:201,27,0	1/1:2,9:12:25.89:190,26,0	1/1:1,14:15:35.86:279,36,0	0/0:16,0:16:24.02:0,24,225	1/1:4,13:18:40.87:308,41,0	1/1:9,19:27:5.41:225,5,0	1/1:3,24:29:69.82:522,70,0
chr10	10552757	.	A	AACACACACAC	8232.91	PASS	AB=1.000;AC=37;AF=0.712;AN=52;BaseQRankSum=-3.883;DP=660;FS=8.062;HRun=0;HaplotypeScore=204.5941;InbreedingCoeff=0.6591;MQ=66.27;MQ0=12;MQRankSum=-2.687;QD=21.44;ReadPosRankSum=-4.461;VQSLOD=1.5357;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:39:32.83:0,33,659	1/1:5,2:8:12.04:523,12,0	./.	./.	0/1:15,0:16:21.34:21,0,433	1/1:24,0:23:15.05:334,15,0	1/1:26,0:25:18.06:563,18,0	0/0:11,0:21:1.23:0,1,41	1/1:20,0:20:14.92:244,15,0	1/1:13,7:23:38.49:957,38,0	1/1:14,0:13:8.54:203,9,0	1/1:11,4:14:12.04:460,12,0	1/1:13,0:13:11.78:174,12,0	1/1:20,0:21:12.02:207,12,0	1/1:18,0:32:3.01:91,3,0	1/1:10,8:22:12.04:537,12,0	1/1:19,10:28:18.06:675,18,0	1/1:14,0:14:18.95:397,19,0	0/0:11,0:16:9.03:0,9,209	0/0:8,0:17:12.04:0,12,279	0/0:18,0:28:3.01:0,3,70	1/1:16,0:17:9.02:172,9,0	1/1:8,8:17:2.52:137,3,0	0/0:17,11:30:2.79:0,3,19	0/0:20,0:20:21.04:0,21,505	1/1:21,0:32:49.05:1252,49,0	1/1:12,7:21:18.06:763,18,0	1/1:9,5:18:15.05:522,15,0
chr10	10552982	.	AAAG	A	2708	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=11.805;DP=585;FS=17.903;HRun=0;HaplotypeScore=89.8810;InbreedingCoeff=0.9265;MQ=60.83;MQ0=1;MQRankSum=-7.249;QD=36.11;ReadPosRankSum=-2.291;VQSLOD=2.2812;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:48:99:0,138,2844	0/0:5,0:5:15.04:0,15,236	0/0:11,0:9:0.24:0,0,417	0/0:9,0:8:19.01:0,19,387	0/0:29,0:29:87.28:0,87,1739	0/0:29,0:29:87.22:0,87,1713	0/0:30,0:30:90.28:0,90,1833	1/1:1,21:22:65.90:964,66,0	0/0:23,0:22:63.21:0,63,1346	0/0:23,0:23:69.20:0,69,1314	0/0:16,0:16:42.14:0,42,874	0/0:10,0:10:30.10:0,30,639	0/0:22,0:22:48.84:0,49,1168	0/0:14,0:14:42.13:0,42,845	0/0:19,0:19:57.20:0,57,1181	0/0:13,0:13:36.12:0,36,756	0/0:26,0:26:78.27:0,78,1602	0/0:27,0:27:78.18:0,78,1531	1/1:2,13:15:36.08:519,36,0	1/1:2,18:20:48.16:792,48,0	1/1:1,17:18:36.12:593,36,0	0/0:16,0:16:48.13:0,48,919	0/0:15,0:15:45.15:0,45,939	0/0:30,0:30:87.30:0,87,1819	0/0:20,0:20:53.88:0,54,989	0/0:32,0:32:93.32:0,93,1937	0/0:23,0:23:69.24:0,69,1457	0/0:19,0:19:57.17:0,57,1159
chr10	10553778	.	AG	A	1318.16	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.522;DP=736;FS=1.324;HRun=3;HaplotypeScore=118.0898;InbreedingCoeff=0.9987;MQ=62.94;MQ0=9;MQRankSum=-0.150;QD=29.29;ReadPosRankSum=0.225;VQSLOD=2.7316;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,44:43:99:1413,114,0	0/0:10,0:10:30.10:0,30,432	0/0:27,0:19:45.13:0,45,628	0/0:16,0:12:33.11:0,33,460	0/0:25,0:25:66.22:0,66,950	0/0:23,0:23:69.23:0,69,993	0/0:26,0:26:72.24:0,72,1035	0/0:37,0:37:99:0,105,1459	0/0:28,0:28:78.25:0,78,1105	0/0:24,0:24:66.22:0,66,951	0/0:11,0:11:30.10:0,30,430	0/0:23,0:23:69.23:0,69,993	0/0:24,0:24:72.24:0,72,1037	0/0:27,0:27:78.26:0,78,1122	0/0:40,0:39:99:0,114,1641	0/0:17,0:17:51.17:0,51,734	0/0:31,0:30:90.30:0,90,1294	0/0:31,0:31:90.29:0,90,1274	0/0:24,0:19:54.17:0,54,759	0/0:15,0:15:42.14:0,42,605	0/0:44,0:44:99:0,129,1802	0/0:29,0:29:87.28:0,87,1230	0/0:27,0:27:78.23:0,78,1083	0/0:33,0:33:98.54:0,99,1388	0/0:18,0:18:54.18:0,54,778	0/0:42,0:42:99:0,123,1750	0/0:18,0:18:54.18:0,54,776	0/0:21,0:21:60.20:0,60,864
chr10	10554173	.	G	GAC	347.49	PASS	AB=0.977;AC=18;AF=0.321;AN=56;BaseQRankSum=-1.938;DP=751;FS=5.686;HRun=0;HaplotypeScore=267.0479;InbreedingCoeff=-0.3181;MQ=53.67;MQ0=14;MQRankSum=1.881;QD=0.81;ReadPosRankSum=-3.552;VQSLOD=1.6246;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:23,31:53:72.79:97,0,73	0/1:9,0:10:11.87:12,0,28	0/0:23,0:16:28.64:0,29,326	0/0:32,0:21:33.01:0,33,371	0/0:29,0:28:48.16:0,48,656	0/0:24,0:24:16.62:0,17,75	0/1:20,0:20:23.20:33,0,23	0/0:44,0:41:99:0,99,1168	0/1:41,0:41:8.41:8,0,85	0/1:20,0:18:5.08:5,0,61	1/1:19,0:19:2.88:18,3,0	0/1:23,0:23:19.33:98,0,19	0/1:20,0:20:23.29:23,0,48	0/1:21,0:20:9.18:9,0,63	0/1:30,0:28:31.44:34,0,31	0/0:33,0:33:14.66:0,15,70	0/0:21,0:21:4.68:0,5,17	0/1:18,0:18:5.52:6,0,65	0/0:17,0:16:36.12:0,36,479	0/0:22,0:21:45.13:0,45,590	0/0:56,0:55:99:0,135,1728	0/1:23,0:23:18.04:18,0,18	0/1:17,0:17:14.05:14,0,23	0/1:43,0:43:12.43:37,0,12	0/0:19,0:19:39.10:0,39,510	0/1:29,0:29:41.46:41,0,123	0/1:23,0:23:24.78:25,0,42	0/1:20,0:20:26.08:26,0,46
chr10	10554175	.	CACAGACACAG	C	10212.95	PASS	AB=0.982;AC=40;AF=0.714;AN=56;BaseQRankSum=0.327;DP=753;FS=0.000;HRun=0;HaplotypeScore=311.1589;InbreedingCoeff=0.7835;MQ=52.52;MQ0=15;MQRankSum=-5.878;QD=18.47;ReadPosRankSum=3.524;VQSLOD=3.0785;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:52,0:53:20.37:20,0,191	1/1:10,0:10:14.98:283,15,0	0/0:23,0:16:23.19:0,23,376	0/0:32,0:21:10.03:0,10,376	0/0:29,0:28:59.25:0,59,1410	1/1:23,1:24:16.05:532,16,0	1/1:22,1:23:33.06:451,33,0	0/1:44,0:41:21.13:21,0,286	1/1:38,1:39:49.21:668,49,0	1/1:20,0:18:43.55:613,44,0	1/1:4,15:19:3.01:35,3,0	1/1:23,0:23:38.97:528,39,0	1/1:21,0:21:43.37:681,43,0	1/1:21,1:21:48.91:518,49,0	1/1:31,0:29:48.04:753,48,0	1/1:31,0:31:56.55:656,57,0	1/1:19,1:20:23.96:327,24,0	1/1:18,0:18:42.15:398,42,0	0/0:20,0:19:37.89:0,38,391	0/0:22,0:21:30.44:0,30,793	0/0:56,0:55:99:0,112,2635	1/1:21,1:22:36.01:566,36,0	1/1:16,2:18:26.91:363,27,0	1/1:40,1:41:24.98:387,25,0	0/0:16,0:18:16.27:0,16,1093	1/1:30,0:29:50.58:919,51,0	1/1:23,0:23:66.06:810,66,0	1/1:20,0:20:50.97:682,51,0
chr10	10554177	.	CAG	C	5051.60	PASS	AB=0.832;AC=35;AF=0.625;AN=56;BaseQRankSum=2.400;DP=754;FS=3.570;HRun=0;HaplotypeScore=253.0101;InbreedingCoeff=0.5636;MQ=52.30;MQ0=15;MQRankSum=-4.435;QD=9.89;ReadPosRankSum=6.501;VQSLOD=4.3595;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:52,1:52:28.12:28,0,64	0/1:7,2:10:4.66:117,0,5	0/0:21,0:15:34.17:0,34,433	0/0:29,0:19:33.35:0,33,429	0/0:30,0:28:59.30:0,59,891	1/1:14,8:25:0.24:247,0,0	1/1:16,6:23:28.72:228,29,0	0/0:44,0:41:83.18:0,83,824	1/1:23,15:41:33.75:471,34,0	0/1:15,3:18:34.51:245,0,35	1/1:16,3:19:2.94:18,3,0	1/1:15,7:23:31.97:275,32,0	1/1:11,7:21:14.81:330,15,0	1/1:9,12:21:22.24:237,22,0	1/1:20,9:29:39.97:344,40,0	1/1:18,11:33:38.98:382,39,0	1/1:16,1:19:13.23:135,13,0	0/1:14,4:18:10.11:162,0,10	0/0:18,0:17:53.11:0,53,522	0/0:23,0:22:32.40:0,32,415	0/0:59,0:58:99:0,101,1290	1/1:17,7:24:35.66:271,36,0	1/1:10,7:18:23.06:195,23,0	1/1:27,12:40:4.83:173,5,0	0/0:18,0:18:41.95:0,42,696	0/1:22,6:29:58.78:405,0,59	1/1:20,3:23:57.93:452,58,0	1/1:14,4:18:39.44:335,39,0
chr10	10554181	.	CACAG	C	8968.15	PASS	AB=1.000;AC=45;AF=0.804;AN=56;BaseQRankSum=-0.702;DP=746;FS=5.993;HRun=0;HaplotypeScore=259.4301;InbreedingCoeff=0.3573;MQ=50.04;MQ0=16;MQRankSum=-4.532;QD=13.33;ReadPosRankSum=2.032;VQSLOD=3.9560;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:51,0:51:17.95:18,0,115	1/1:10,0:10:15.60:201,16,0	0/0:17,0:11:16.39:0,16,169	0/0:25,0:16:3.25:0,3,131	0/0:29,0:27:34.63:0,35,511	1/1:24,0:24:37.66:487,38,0	1/1:22,0:22:29.45:336,29,0	1/1:45,0:42:48.95:569,49,0	1/1:42,0:42:50.58:754,51,0	1/1:20,0:18:29.35:378,29,0	1/1:19,0:19:2.94:18,3,0	1/1:21,1:22:29.97:306,30,0	1/1:22,0:22:43.37:502,43,0	1/1:21,1:21:42.90:513,43,0	1/1:31,1:30:47.97:494,48,0	1/1:33,1:34:56.86:638,57,0	1/1:19,0:19:23.73:193,24,0	1/1:17,1:18:23.19:272,23,0	0/1:18,0:17:63.33:77,0,63	0/1:24,0:23:99:182,0,125	0/1:59,0:58:99:436,0,463	1/1:24,0:24:32.98:335,33,0	1/1:19,0:19:29.94:336,30,0	1/1:39,1:40:20.91:235,21,0	0/1:18,0:18:52.50:53,0,443	1/1:30,0:29:43.13:744,43,0	1/1:23,0:22:50.65:464,51,0	1/1:14,1:15:41.95:427,42,0
chr10	10554183	.	CAG	C	7569.74	PASS	AB=0.938;AC=46;AF=0.821;AN=56;BaseQRankSum=0.800;DP=730;FS=1.030;HRun=0;HaplotypeScore=244.3715;InbreedingCoeff=0.6528;MQ=48.96;MQ0=15;MQRankSum=-1.552;QD=11.75;ReadPosRankSum=2.851;VQSLOD=4.2672;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:52,0:51:19.60:20,0,48	1/1:8,2:10:16.59:135,17,0	0/0:16,0:11:16.24:0,16,205	0/0:24,0:13:0.89:0,1,123	0/0:28,0:26:28.55:0,29,377	1/1:16,9:25:38.80:319,39,0	1/1:16,6:22:27.47:214,27,0	1/1:38,5:40:76.80:783,77,0	1/1:25,15:40:60.70:513,61,0	0/1:18,3:19:11.95:259,0,12	1/1:16,3:19:2.94:18,3,0	1/1:16,5:22:29.94:249,30,0	1/1:12,8:20:37.77:343,38,0	1/1:12,11:22:40.64:305,41,0	1/1:24,8:30:47.90:388,48,0	1/1:23,9:32:56.45:447,56,0	1/1:18,1:19:23.23:153,23,0	1/1:14,2:16:32.07:206,32,0	1/1:17,0:16:12.71:177,13,0	1/1:21,2:22:21.07:286,21,0	1/1:53,6:58:32.92:871,33,0	1/1:17,6:23:32.91:263,33,0	1/1:12,7:19:29.90:239,30,0	1/1:29,11:40:23.50:200,24,0	0/0:18,0:18:24.66:0,25,295	1/1:25,6:30:36.02:476,36,0	1/1:18,3:20:50.62:382,51,0	1/1:12,3:15:41.55:326,42,0
chr10	10554209	.	C	CAG	3903.84	PASS	AB=0.821;AC=38;AF=0.679;AN=56;BaseQRankSum=11.025;DP=745;FS=6.095;HRun=0;HaplotypeScore=245.1940;InbreedingCoeff=0.6086;MQ=52.74;MQ0=14;MQRankSum=-5.851;QD=7.95;ReadPosRankSum=4.103;VQSLOD=2.2563;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:50:13.95:0,14,219	1/1:11,0:11:11.86:68,12,0	0/0:34,0:18:51.09:0,51,563	0/0:20,0:13:35.91:0,36,359	0/1:24,0:22:21.08:21,0,156	1/1:15,13:30:21.92:156,22,0	1/1:19,4:23:31.74:270,32,0	0/0:42,0:40:89.40:0,89,695	1/1:33,2:35:60.93:422,61,0	1/1:25,0:23:3.52:435,4,0	1/1:19,1:20:8.93:74,9,0	0/1:12,12:25:3.18:109,0,3	1/1:23,1:24:50.14:331,50,0	1/1:16,8:23:24.29:242,24,0	1/1:13,18:32:18.71:177,19,0	1/1:25,2:27:40.63:376,41,0	1/1:24,0:24:5.74:69,6,0	0/1:6,9:15:10.11:158,0,10	0/0:26,0:25:61.88:0,62,574	0/0:20,0:19:19.22:0,19,378	0/0:60,0:60:99:0,122,1438	1/1:11,10:21:5.19:19,5,0	1/1:12,8:20:13.77:137,14,0	1/1:21,0:41:6.34:22,6,0	0/1:18,0:18:23.05:23,0,121	1/1:15,17:31:21.62:527,22,0	1/1:5,4:8:11.66:92,12,0	1/1:4,7:11:16.24:176,16,0
chr10	10554213	.	C	CACAGAGAG	13156.91	PASS	AB=0.992;AC=44;AF=0.786;AN=56;BaseQRankSum=-0.096;DP=778;FS=2.804;HRun=0;HaplotypeScore=284.1148;InbreedingCoeff=0.4899;MQ=56.57;MQ0=13;MQRankSum=-7.926;QD=19.46;ReadPosRankSum=1.110;VQSLOD=3.9926;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:51,0:53:60.81:686,61,0	1/1:12,0:12:12.15:244,12,0	0/0:37,0:21:60.19:0,60,1234	0/0:22,0:15:38.53:0,39,799	0/0:22,0:20:31.39:0,31,456	1/1:31,0:31:29.08:424,29,0	1/1:24,0:24:33.06:747,33,0	0/1:42,0:40:99:192,0,301	1/1:36,0:36:71.54:1349,72,0	1/1:14,13:27:45.57:1578,46,0	1/1:16,0:16:9.02:222,9,0	1/1:27,0:27:11.89:391,12,0	1/1:25,0:26:54.90:970,55,0	1/1:26,0:25:30.47:673,30,0	1/1:35,0:35:32.02:576,32,0	1/1:28,0:28:47.98:1096,48,0	1/1:7,17:29:15.05:248,15,0	1/1:18,0:18:27.05:584,27,0	0/1:26,0:25:51.06:51,0,218	0/0:21,0:20:3.82:0,4,224	0/1:60,0:62:19.49:19,0,893	1/1:21,0:21:6.01:66,6,0	1/1:20,0:20:14.47:356,14,0	1/1:41,1:43:13.01:115,13,0	0/1:17,0:17:16.98:17,0,292	1/1:33,0:33:87.03:1870,87,0	1/1:9,0:8:9.36:248,9,0	1/1:11,0:11:20.89:433,21,0
chr10	10554714	.	CAG	C	40.23	PASS	AB=0.978;AC=9;AF=0.250;AN=36;BaseQRankSum=0.949;DP=457;FS=8.141;HRun=0;HaplotypeScore=55.2515;InbreedingCoeff=0.0636;MQ=64.27;MQ0=18;MQRankSum=-0.062;QD=0.36;ReadPosRankSum=-1.299;VQSLOD=0.0759;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:27:15.01:0,15,169	./.	./.	0/0:45,0:15:0:0,0,0	./.	0/0:8,0:8:0:0,0,0	0/0:26,0:26:8.69:0,9,75	./.	1/1:8,2:11:5.85:46,6,0	0/0:14,0:14:3.86:0,4,23	./.	0/0:13,0:11:3.01:0,3,43	0/1:13,0:13:15.19:15,0,35	0/1:14,0:14:11.01:11,0,39	0/1:13,0:13:11.30:11,0,98	0/0:11,0:10:12.04:0,12,173	0/1:28,4:31:13.65:14,0,155	0/1:19,0:19:14:39,0,14	./.	./.	./.	./.	./.	0/0:25,0:26:15.02:0,15,172	1/1:8,0:10:2.84:14,3,0	0/0:10,0:10:15.01:0,15,136	0/0:18,0:18:2.09:0,2,184	0/0:10,0:9:1.25:0,1,3
chr10	10556968	.	C	CGG	11484.63	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-8.782;DP=487;FS=6.930;HRun=6;HaplotypeScore=74.4448;InbreedingCoeff=0.9575;MQ=80.12;MQ0=0;MQRankSum=-4.751;QD=34.18;ReadPosRankSum=2.101;VQSLOD=4.4099;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:19,1:27:16.93:169,17,0	1/1:1,3:4:9:122,9,0	0/0:11,0:11:21.05:0,21,251	0/0:18,0:18:45.10:0,45,525	0/0:16,0:16:27.97:0,28,331	1/1:2,15:17:36.12:604,36,0	1/1:1,23:24:63.18:1036,63,0	0/0:16,0:16:33.06:0,33,379	1/1:0,15:16:42.14:710,42,0	1/1:3,23:26:54.13:828,54,0	1/1:2,8:12:18.06:304,18,0	1/1:0,23:24:47.91:811,48,0	1/1:3,10:13:24.08:406,24,0	1/1:1,10:11:23.89:401,24,0	1/1:0,11:12:30.06:476,30,0	1/1:1,14:15:39.13:659,39,0	1/1:0,36:37:90.31:1522,90,0	1/1:2,22:24:60:983,60,0	0/0:7,0:7:21.07:0,21,256	0/0:15,0:15:27.08:0,27,329	0/0:61,0:61:99:0,147,1756	1/1:0,7:7:8.99:121,9,0	1/1:2,8:10:14.95:190,15,0	1/1:1,19:21:45.15:761,45,0	0/0:7,0:7:9.02:0,9,109	1/1:3,16:19:45.05:621,45,0	1/1:0,12:12:33.11:558,33,0	1/1:0,4:4:12.04:203,12,0
chr10	10560300	.	A	AC	7758.48	PASS	AB=0.624;AC=42;AF=0.750;AN=56;BaseQRankSum=-6.054;DP=527;FS=21.282;HRun=9;HaplotypeScore=65.5785;InbreedingCoeff=0.3951;MQ=68.52;MQ0=1;MQRankSum=2.268;QD=17.32;ReadPosRankSum=-1.033;VQSLOD=3.3309;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:14,1:20:5.72:29,6,0	1/1:1,10:11:21.06:232,21,0	0/0:19,0:17:15.87:0,16,163	0/0:18,0:16:14.96:0,15,133	0/0:29,0:30:70.93:0,71,589	1/1:4,15:19:21.06:232,21,0	1/1:3,12:15:28.84:388,29,0	0/1:11,7:17:5:178,0,5	1/1:2,18:20:42.11:463,42,0	1/1:8,18:26:39.07:418,39,0	1/1:2,6:8:9.02:99,9,0	1/1:6,10:16:16:375,16,0	0/1:7,7:14:25.05:197,0,25	1/1:1,15:16:42.11:461,42,0	0/1:5,14:19:27.75:353,0,28	0/1:8,15:23:3.07:341,0,3	1/1:3,17:20:10.05:339,10,0	0/1:4,17:22:2.08:445,0,2	1/1:3,24:27:71.79:739,72,0	1/1:10,11:22:9.81:299,10,0	1/1:7,14:22:35.91:364,36,0	0/1:7,12:19:24.15:206,0,24	1/1:2,14:16:24.06:265,24,0	1/1:3,20:23:25.20:505,25,0	0/0:12,0:12:35.99:0,36,312	1/1:5,10:15:3.94:247,4,0	1/1:8,19:27:0.24:417,0,0	1/1:1,9:10:15.04:166,15,0
chr10	10560901	.	G	GCACA	2443.60	PASS	AB=1.000;AC=16;AF=0.286;AN=56;BaseQRankSum=3.850;DP=773;FS=0.000;HRun=0;HaplotypeScore=295.1627;InbreedingCoeff=0.3060;MQ=59.67;MQ0=5;MQRankSum=-6.085;QD=6.66;ReadPosRankSum=-7.092;VQSLOD=0.4744;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:29:1.46:1,0,79	0/1:13,0:13:3.21:3,0,159	0/0:41,0:28:27.10:0,27,376	0/0:40,0:28:2:0,2,423	0/0:14,0:14:8.17:0,8,471	0/0:19,0:19:26.75:0,27,427	0/0:43,0:44:5.05:0,5,649	1/1:21,4:26:61.38:970,61,0	0/0:26,0:26:39.73:0,40,708	0/1:31,0:32:41.78:42,0,887	0/0:13,0:13:8.93:0,9,152	0/0:30,0:30:35.58:0,36,601	0/1:28,0:28:88.60:89,0,388	0/1:39,0:39:3.51:4,0,690	0/0:24,0:24:26.29:0,26,451	0/0:27,0:27:15.19:0,15,429	0/0:23,0:22:44.68:0,45,749	0/1:25,0:26:24.83:25,0,709	1/1:13,2:14:27.18:419,27,0	1/1:18,5:23:20.81:369,21,0	1/1:66,11:80:36:608,36,0	0/0:25,0:25:36.01:0,36,528	0/0:27,0:27:39.06:0,39,649	0/0:20,0:20:14.91:0,15,213	0/0:16,0:16:48.12:0,48,759	0/1:41,0:42:77.56:78,0,1281	0/0:16,0:16:7.53:0,8,325	0/1:12,0:12:7.37:7,0,324
chr10	10560919	.	A	ATG	2549.32	PASS	AB=0.823;AC=17;AF=0.304;AN=56;BaseQRankSum=7.313;DP=879;FS=4.294;HRun=0;HaplotypeScore=324.0630;InbreedingCoeff=-0.4317;MQ=44.44;MQ0=14;MQRankSum=-10.168;QD=4.97;ReadPosRankSum=-4.108;VQSLOD=1.9212;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:31,3:34:34.37:34,0,90	0/1:8,7:15:77.29:77,0,130	0/0:41,0:14:26.63:0,27,350	0/0:38,0:18:47.67:0,48,679	0/0:13,0:13:36.12:0,36,578	0/1:14,4:18:9.32:9,0,365	0/1:39,7:46:6.25:6,0,580	0/1:30,3:32:99:282,0,448	0/1:32,6:38:26.50:27,0,728	0/1:27,10:36:99:511,0,1001	0/0:9,6:15:8.87:0,9,144	0/1:23,14:37:25.26:25,0,541	0/1:13,9:22:99:201,0,399	0/0:29,12:41:47.70:0,48,729	0/0:19,8:27:26.44:0,26,436	0/1:24,9:33:23.32:23,0,458	0/1:24,3:26:99:119,0,757	0/1:23,3:26:99:117,0,755	0/1:35,2:34:99:199,0,558	0/1:23,5:29:42.90:43,0,130	0/0:74,19:87:20.73:0,21,172	0/0:17,7:24:30.60:0,31,464	0/0:21,9:30:38.18:0,38,634	0/0:22,3:24:11.76:0,12,188	0/0:19,0:19:54.18:0,54,880	0/1:36,13:49:99:716,0,1366	0/1:14,5:19:99:158,0,321	0/1:9,4:13:99:160,0,298
chr10	10560933	.	ACG	A	1197.33	PASS	AB=0.998;AC=22;AF=0.393;AN=56;BaseQRankSum=6.445;DP=853;FS=19.975;HRun=0;HaplotypeScore=332.5477;InbreedingCoeff=-0.2982;MQ=39.58;MQ0=12;MQRankSum=-2.625;QD=2.25;ReadPosRankSum=6.643;VQSLOD=0.7360;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:35,0:35:1.58:22,2,0	1/1:16,0:16:1.56:19,2,0	0/0:33,0:8:8.31:0,8,97	0/0:29,0:13:1.41:0,1,249	0/0:12,0:12:36.12:0,36,686	1/1:16,0:16:5.81:48,6,0	0/1:42,0:42:25.22:25,0,100	0/0:43,1:42:39.10:0,39,762	0/1:37,0:37:78.59:108,0,79	0/1:38,0:37:44.91:253,0,45	0/1:16,0:16:7.14:8,0,7	0/1:35,0:35:35.18:35,0,115	0/1:25,0:26:64.33:124,0,64	0/1:37,0:37:71.72:83,0,72	0/0:30,0:29:5.26:0,5,137	0/1:34,0:34:30.37:72,0,30	0/1:26,0:25:6.98:114,0,7	0/1:24,0:24:21.38:21,0,141	0/0:32,0:29:0.81:0,1,420	0/0:25,0:25:8.29:0,8,146	0/0:93,3:89:0.42:0,0,117	0/1:23,1:24:3.45:3,0,106	0/1:27,0:27:0.47:0,0,89	0/1:26,0:25:25:40,0,25	0/0:21,0:21:60.16:0,60,1008	0/1:47,0:47:99:268,0,120	0/1:16,0:16:31.04:54,0,31	0/1:9,0:9:6.16:47,0,6
chr10	10560944	.	CAG	C	4555.97	PASS	AB=0.796;AC=22;AF=0.393;AN=56;BaseQRankSum=-3.127;DP=835;FS=2.231;HRun=0;HaplotypeScore=328.0387;InbreedingCoeff=-0.6370;MQ=40.16;MQ0=8;MQRankSum=-0.594;QD=7.42;ReadPosRankSum=5.014;VQSLOD=3.7269;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,7:34:17.49:0,17,111	0/1:11,4:15:19.98:20,0,92	0/1:32,0:7:8.62:9,0,82	0/0:32,0:14:22.61:0,23,286	0/0:16,0:16:48.09:0,48,774	0/1:12,4:16:59.64:119,0,60	0/1:27,15:42:59.13:185,0,59	0/1:39,0:37:99:162,0,564	0/1:17,17:34:99:363,0,149	0/1:20,18:37:99:776,0,470	0/1:14,4:18:60.13:80,0,60	0/1:24,13:37:99:207,0,151	0/1:22,6:28:99:162,0,245	0/1:28,10:38:99:263,0,181	0/1:20,7:26:75.54:76,0,158	0/1:17,16:33:99:142,0,182	0/1:18,9:26:73.32:388,0,73	0/1:12,8:20:99:266,0,236	0/1:20,1:19:74.58:75,0,262	0/0:24,0:24:11.10:0,11,76	0/0:96,0:91:30:0,30,334	0/1:19,5:24:76.67:132,0,77	0/1:16,6:22:10.46:146,0,10	0/1:20,7:27:58.68:59,0,170	0/0:19,0:19:54.10:0,54,980	0/1:31,17:48:99:746,0,783	0/1:12,3:15:79.76:118,0,80	0/1:9,3:12:66.43:66,0,230
chr10	10560975	.	G	GCACA	11095.38	PASS	AB=0.630;AC=46;AF=0.821;AN=56;BaseQRankSum=2.041;DP=860;FS=1.590;HRun=0;HaplotypeScore=286.3937;InbreedingCoeff=0.6351;MQ=53.04;MQ0=2;MQRankSum=-4.881;QD=14.97;ReadPosRankSum=3.165;VQSLOD=4.2668;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:15,23:43:19:456,19,0	1/1:11,5:18:11.50:170,11,0	0/0:29,0:20:11.88:0,12,340	0/0:38,0:32:42.35:0,42,807	0/0:23,0:23:51.13:0,51,833	1/1:6,6:12:12.51:303,13,0	1/1:16,17:35:11.68:178,12,0	1/1:16,0:29:8.76:138,9,0	1/1:11,18:29:28.01:693,28,0	1/1:16,24:42:86.17:1500,86,0	1/1:4,9:14:5.72:151,6,0	1/1:12,22:34:27.96:680,28,0	1/1:11,19:31:33.18:772,33,0	1/1:10,23:36:26.94:579,27,0	1/1:9,15:23:14.64:447,15,0	1/1:24,6:31:29.78:596,30,0	1/1:13,13:25:18.81:269,19,0	1/1:11,10:22:20.87:412,21,0	1/1:21,0:22:12.33:53,12,0	1/1:14,0:21:2.80:13,3,0	0/1:57,0:100:42.31:259,0,42	1/1:19,7:26:23.60:562,24,0	1/1:5,11:19:5.91:152,6,0	1/1:12,24:40:26.78:616,27,0	0/0:28,0:28:75.12:0,75,1240	1/1:18,22:44:71.65:1417,72,0	0/1:5,13:20:57.25:304,0,57	1/1:5,10:15:15.05:377,15,0
chr10	10561412	.	C	CGGATGGATGGATGGAT	31461.37	PASS	AC=46;AF=0.852;AN=54;BaseQRankSum=0.709;DP=768;FS=11.312;HRun=0;HaplotypeScore=322.4404;InbreedingCoeff=0.9021;MQ=54.47;MQ0=1;MQRankSum=-8.924;QD=47.81;ReadPosRankSum=-1.651;VQSLOD=2.9584;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:37:34.67:591,35,0	1/1:8,1:11:9.03:623,9,0	0/0:15,0:13:9.04:0,9,389	0/0:21,0:20:11.90:0,12,362	0/0:23,0:24:42.14:0,42,1591	1/1:20,0:20:21.04:558,21,0	1/1:50,0:50:51.09:1650,51,0	1/1:36,0:36:42.13:1090,42,0	1/1:27,6:36:36.12:2246,36,0	1/1:25,3:28:36.12:2012,36,0	./.	1/1:26,5:34:24.08:1793,24,0	1/1:8,3:12:14.89:1051,15,0	1/1:25,8:33:51.17:2983,51,0	1/1:34,5:41:36.04:2217,36,0	1/1:22,7:30:17.27:1100,17,0	1/1:36,7:44:30.10:1847,30,0	1/1:20,0:20:8.95:403,9,0	1/1:17,4:22:24.04:711,24,0	1/1:9,2:11:9.03:504,9,0	1/1:43,0:43:34.36:1148,34,0	1/1:20,4:25:12.04:706,12,0	1/1:16,4:21:19.88:1126,20,0	1/1:27,6:34:18.06:1174,18,0	0/0:32,0:32:60.12:0,60,2197	1/1:29,1:35:54.19:3185,54,0	1/1:14,6:24:30.10:1979,30,0	1/1:10,0:10:15.05:765,15,0
chr10	10564704	.	GACAC	G	4987.19	PASS	AB=0.812;AC=35;AF=0.673;AN=52;BaseQRankSum=-0.135;DP=562;FS=15.399;HRun=0;HaplotypeScore=108.0354;InbreedingCoeff=0.5419;MQ=62.35;MQ0=20;MQRankSum=-1.230;QD=13.48;ReadPosRankSum=1.141;VQSLOD=3.3745;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:42:12.01:0,12,176	1/1:4,0:4:3.01:47,3,0	./.	./.	0/0:13,0:14:15.03:0,15,287	1/1:5,6:12:21.06:312,21,0	0/1:20,7:28:1.51:259,0,2	0/0:18,0:18:6.43:0,6,27	1/1:13,7:20:17.22:374,17,0	0/1:13,0:16:11.03:60,0,11	1/1:7,2:7:3.01:47,3,0	1/1:14,10:25:27.08:406,27,0	1/1:13,6:19:5.57:224,6,0	1/1:12,4:18:21.04:286,21,0	1/1:14,9:23:29.92:420,30,0	1/1:9,11:21:42.12:602,42,0	1/1:14,14:29:33.02:471,33,0	1/1:10,14:29:8.11:324,8,0	0/0:12,0:12:5.75:0,6,84	0/0:8,0:9:8.75:0,9,80	0/1:24,1:30:22.56:23,0,128	0/0:8,2:10:0:0,0,0	1/1:8,1:10:6.01:75,6,0	1/1:18,9:27:17.87:283,18,0	0/0:11,0:11:5.05:0,5,78	1/1:12,8:21:24.07:354,24,0	1/1:9,6:15:21.06:312,21,0	1/1:5,3:8:8.70:106,9,0
chr10	10564749	.	GCC	G	1168.98	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-6.687;DP=495;FS=2.883;HRun=10;HaplotypeScore=115.1366;InbreedingCoeff=0.9023;MQ=60.36;MQ0=9;MQRankSum=3.323;QD=17.98;ReadPosRankSum=-0.230;VQSLOD=2.4703;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:57.13:0,57,598	0/0:2,0:2:3.01:0,3,34	0/0:19,0:10:10.19:0,10,259	0/0:21,0:8:10.86:0,11,219	0/0:5,0:15:28.05:0,28,131	0/0:14,0:14:36.04:0,36,391	0/0:28,0:28:74.99:0,75,762	1/1:6,14:20:33.02:358,33,0	0/0:23,0:22:57.15:0,57,663	0/0:17,0:17:44.75:0,45,446	0/0:8,0:8:12.03:0,12,131	0/0:20,0:20:45.06:0,45,519	0/0:22,0:22:54:0,54,536	0/0:16,0:16:39.06:0,39,411	0/0:23,0:23:63.10:0,63,678	0/0:23,0:22:60.09:0,60,642	0/0:32,0:32:84.12:0,84,916	0/0:29,0:28:54.08:0,54,559	1/1:0,6:6:18.05:200,18,0	1/1:1,4:5:12.03:132,12,0	1/1:7,27:34:57.12:635,57,0	0/0:12,0:11:30.08:0,30,339	0/0:10,0:10:20.95:0,21,200	0/0:15,0:15:35.93:0,36,341	0/0:7,0:7:12.04:0,12,183	0/0:19,0:19:48.10:0,48,529	0/0:16,0:16:41.48:0,41,462	0/0:8,0:8:21.06:0,21,251
chr10	10565128	.	A	ATT	4716.67	PASS	AB=0.944;AC=40;AF=0.714;AN=56;BaseQRankSum=1.746;DP=464;FS=0.000;HRun=14;HaplotypeScore=77.7415;InbreedingCoeff=0.7445;MQ=65.77;MQ0=6;MQRankSum=-2.136;QD=13.55;ReadPosRankSum=-2.147;VQSLOD=3.3326;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,17:30:40.12:418,40,0	1/1:3,2:7:13.72:114,14,0	0/1:16,0:10:4.55:5,0,18	0/0:10,0:8:2.77:0,3,17	0/0:14,0:17:12.24:0,12,181	1/1:3,9:13:21.03:257,21,0	1/1:7,11:18:12.45:223,12,0	0/0:31,0:30:30.21:0,30,313	1/1:9,10:20:13.94:116,14,0	1/1:7,15:22:42.05:497,42,0	1/1:6,4:13:28.41:249,28,0	1/1:9,1:10:17.80:135,18,0	0/1:7,1:8:7.04:100,0,7	1/1:4,7:11:12.65:129,13,0	1/1:9,5:17:29.21:201,29,0	1/1:11,3:14:23.85:169,24,0	1/1:13,1:24:5.91:183,6,0	1/1:12,1:16:31.30:248,31,0	0/0:16,0:14:23.10:0,23,195	0/0:13,0:14:23.54:0,24,187	0/0:8,0:10:20.57:0,21,162	1/1:4,4:8:11.99:137,12,0	1/1:11,2:12:14.19:120,14,0	1/1:5,13:19:29.89:373,30,0	0/0:16,0:15:20.66:0,21,175	1/1:10,16:28:52.71:554,53,0	1/1:8,13:22:0.41:150,0,0	1/1:3,5:12:32.39:339,32,0
chr10	10568770	.	CT	C	904.65	PASS	AB=0.803;AC=15;AF=0.268;AN=56;BaseQRankSum=2.391;DP=547;FS=1.442;HRun=14;HaplotypeScore=76.7805;InbreedingCoeff=0.1330;MQ=78.55;MQ0=3;MQRankSum=1.777;QD=4.23;ReadPosRankSum=1.272;VQSLOD=1.4828;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:14,24:40:1.85:285,2,0	0/0:7,0:8:14.79:0,15,109	0/0:40,0:28:20.59:0,21,165	0/0:22,0:13:5.99:0,6,49	0/0:22,0:24:57.29:0,57,500	0/1:12,6:18:72.41:72,0,256	0/1:14,1:17:18.80:19,0,190	1/1:7,13:21:34.68:232,35,0	0/1:12,1:14:3.44:3,0,144	0/0:21,0:21:29.56:0,30,272	0/0:11,2:15:2.40:0,2,174	0/0:21,1:24:11.43:0,11,259	0/0:20,0:20:8.60:0,9,253	0/0:15,0:15:12.43:0,12,248	0/0:20,2:22:0.76:0,1,267	0/0:20,0:20:14.81:0,15,345	0/0:18,2:22:9.57:0,10,346	0/0:17,0:18:38.05:0,38,371	1/1:9,8:18:0.93:142,1,0	0/1:2,8:12:1.06:106,0,1	0/1:10,9:22:2.54:111,0,3	0/1:16,2:19:62.80:63,0,171	0/1:10,0:12:5.90:6,0,187	0/1:14,3:17:4.68:5,0,234	0/0:23,0:23:14.81:0,15,216	0/0:12,1:13:6.46:0,6,202	0/0:24,0:25:23.56:0,24,363	0/1:3,1:4:8.56:9,0,71
chr10	10569117	.	G	GCA	3935.51	PASS	AB=0.807;AC=35;AF=0.625;AN=56;BaseQRankSum=10.201;DP=402;FS=32.198;HRun=0;HaplotypeScore=138.5887;InbreedingCoeff=0.5265;MQ=39.03;MQ0=25;MQRankSum=-5.814;QD=18.83;ReadPosRankSum=6.871;VQSLOD=1.7263;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:13.82:0,14,168	1/1:2,1:3:3.01:54,3,0	0/0:9,0:2:5.99:0,6,64	0/0:18,0:4:6.01:0,6,69	0/0:20,0:20:36.09:0,36,531	1/1:5,3:8:12.04:184,12,0	0/1:10,7:15:25.04:125,0,25	0/0:34,0:33:90.14:0,90,1001	1/1:5,7:12:17.88:312,18,0	1/1:4,9:15:13.52:660,14,0	0/1:5,1:5:0:0,0,0	1/1:12,4:17:13.55:172,14,0	1/1:2,2:4:9.03:143,9,0	1/1:4,3:7:3.01:37,3,0	1/1:5,6:12:18.06:331,18,0	1/1:4,5:8:10.70:200,11,0	1/1:6,11:17:24.42:481,24,0	0/1:6,4:9:56.50:240,0,57	0/0:21,0:19:53.85:0,54,604	0/1:8,0:7:0:0,0,0	0/0:47,0:43:26.99:0,27,337	1/1:10,6:14:3.01:56,3,0	1/1:4,2:6:2.83:35,3,0	1/1:9,2:11:5.62:61,6,0	0/0:15,0:14:39.13:0,39,600	0/1:13,4:17:62.21:557,0,62	1/1:0,2:2:3.01:55,3,0	1/1:5,2:6:15.05:232,15,0
chr10	10569119	.	G	GCACA	5213.31	PASS	AB=0.797;AC=33;AF=0.589;AN=56;BaseQRankSum=8.262;DP=409;FS=33.511;HRun=0;HaplotypeScore=144.4978;InbreedingCoeff=0.3800;MQ=39.82;MQ0=24;MQRankSum=-6.505;QD=23.38;ReadPosRankSum=6.037;VQSLOD=2.5247;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:14.71:0,15,276	1/1:3,1:4:3.01:58,3,0	0/0:8,0:1:2.99:0,3,23	0/0:15,0:3:3.01:0,3,33	0/0:20,0:20:36.12:0,36,750	1/1:4,4:8:12.04:260,12,0	0/1:12,6:19:33.57:241,0,34	0/0:32,0:31:81.19:0,81,1443	1/1:11,2:13:17.79:337,18,0	0/1:12,3:15:13.89:811,0,14	0/1:4,3:6:0:0,0,0	1/1:7,10:17:18:268,18,0	1/1:2,2:4:9.03:179,9,0	1/1:7,0:7:3.01:38,3,0	1/1:10,4:14:21.05:365,21,0	1/1:9,1:9:10.51:245,11,0	0/1:14,4:18:15.48:521,0,15	0/1:9,2:9:90.11:341,0,90	0/0:20,0:17:48.16:0,48,857	0/1:8,0:7:0:0,0,0	0/0:46,0:42:21.44:0,21,351	1/1:14,4:15:2.86:57,3,0	1/1:5,2:7:3.01:70,3,0	1/1:12,0:11:5.43:67,5,0	0/0:15,0:14:39.13:0,39,812	0/1:10,9:18:99:934,0,125	1/1:2,0:2:3.01:56,3,0	1/1:4,3:6:15.05:366,15,0
chr10	10569120	.	T	TGCGCACAC	6716.67	PASS	AB=1.000;AC=35;AF=0.625;AN=56;BaseQRankSum=6.492;DP=414;FS=38.726;HRun=0;HaplotypeScore=157.6130;InbreedingCoeff=0.6408;MQ=40.16;MQ0=23;MQRankSum=-6.964;QD=31.39;ReadPosRankSum=5.393;VQSLOD=2.8468;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:15.52:0,16,343	1/1:4,0:4:5.99:88,6,0	0/0:8,0:1:0.47:0,0,1	0/0:13,0:3:3.01:0,3,33	0/0:20,0:20:36.12:0,36,1006	1/1:8,0:8:12.04:338,12,0	1/1:22,0:20:16.94:363,17,0	0/0:30,0:29:77.28:0,77,1725	1/1:13,0:13:20.36:459,20,0	1/1:15,0:15:38.19:1005,38,0	0/0:8,0:7:0.47:0,0,1	1/1:17,0:17:17.62:337,18,0	1/1:4,0:4:9.03:203,9,0	1/1:4,4:9:3.01:39,3,0	1/1:14,0:14:24.07:523,24,0	1/1:10,0:9:13.81:335,14,0	1/1:18,0:18:16.29:628,16,0	1/1:11,0:9:10.17:421,10,0	0/0:20,0:17:42.31:0,42,887	0/0:9,0:8:0.94:0,1,1	0/0:46,0:42:15.52:0,16,348	1/1:20,0:17:2.93:64,3,0	1/1:7,0:7:2.08:95,2,0	1/1:12,0:11:2.67:43,3,0	0/0:15,0:14:39.13:0,39,1092	0/1:19,0:18:11.39:1225,0,11	1/1:2,0:2:3.01:63,3,0	1/1:8,0:7:15.05:488,15,0
chr10	10569122	.	T	TGCGCACACGC	10806.95	PASS	AB=1.000;AC=39;AF=0.696;AN=56;BaseQRankSum=2.661;DP=511;FS=42.560;HRun=0;HaplotypeScore=206.5167;InbreedingCoeff=0.7874;MQ=42.22;MQ0=21;MQRankSum=-6.156;QD=32.45;ReadPosRankSum=2.321;VQSLOD=2.3448;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:15.51:0,16,351	1/1:6,0:6:6.02:118,6,0	0/0:6,0:2:3.01:0,3,36	0/0:13,0:4:3.01:0,3,47	0/0:20,0:20:36.11:0,36,1095	1/1:10,0:10:12.04:379,12,0	1/1:31,0:29:23.89:597,24,0	0/0:31,0:30:79.20:0,79,1815	1/1:20,0:19:23.38:658,23,0	1/1:20,0:20:57.15:1494,57,0	1/1:14,0:13:2.26:24,2,0	1/1:24,0:24:20.58:451,21,0	1/1:10,0:10:21.07:629,21,0	1/1:13,0:13:9.01:190,9,0	1/1:18,0:18:24.08:631,24,0	1/1:19,0:18:17.42:523,17,0	1/1:26,0:26:35.30:1140,35,0	1/1:14,0:12:21.54:609,22,0	0/0:19,0:16:33.47:0,33,920	0/1:10,0:9:0:0,0,1	0/0:43,0:39:15.98:0,16,250	1/1:21,0:18:6.38:85,6,0	1/1:10,0:10:5.73:125,6,0	1/1:12,8:19:6.02:96,6,0	0/0:16,0:15:39.11:0,39,1236	1/1:27,0:26:66.17:2173,66,0	1/1:7,0:7:9.01:183,9,0	1/1:13,0:12:21.03:701,21,0
chr10	10569128	.	T	TGTGC	56.95	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=-0.420;DP=540;FS=22.631;HRun=0;HaplotypeScore=197.9651;InbreedingCoeff=0.3210;MQ=43.41;MQ0=18;MQRankSum=-0.365;QD=0.50;ReadPosRankSum=-0.736;VQSLOD=1.3975;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:8,19:31:5.42:100,5,0	0/0:7,0:7:5.99:0,6,50	0/1:6,0:2:0.65:1,0,20	0/0:14,0:5:8.74:0,9,55	0/0:23,0:23:35.97:0,36,374	0/0:11,0:11:14.90:0,15,112	0/0:36,0:35:25.23:0,25,166	0/0:27,0:26:49.11:0,49,345	0/0:23,0:22:30.33:0,30,234	0/0:23,0:23:47.54:0,48,451	0/0:14,0:14:5.93:0,6,50	0/0:26,0:26:23.06:0,23,195	0/0:11,0:11:11.92:0,12,91	0/0:15,0:15:14.97:0,15,121	0/0:20,0:20:26.96:0,27,223	0/0:21,0:21:29.86:0,30,238	0/0:27,0:27:16.02:0,16,242	0/1:15,0:13:31.44:31,0,142	0/0:19,0:16:9.36:0,9,46	0/0:10,0:9:2.92:0,3,17	1/1:37,0:33:2.95:30,3,0	0/0:21,0:18:9.28:0,9,68	0/0:12,0:12:8.78:0,9,66	0/1:24,0:23:6.04:6,0,56	0/0:15,0:14:38.97:0,39,386	0/0:29,0:28:36.08:0,36,456	0/0:10,0:10:23.93:0,24,191	0/0:13,0:12:32.62:0,33,241
chr10	10569132	.	TGCGCACAC	T	1663.34	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-0.035;DP=547;FS=0.749;HRun=0;HaplotypeScore=211.0420;InbreedingCoeff=0.8253;MQ=44.97;MQ0=14;MQRankSum=-3.692;QD=19.34;ReadPosRankSum=0.519;VQSLOD=2.9985;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:31:18.99:0,19,745	0/0:9,0:9:12.04:0,12,415	0/0:7,0:3:9.03:0,9,229	0/0:13,0:5:12.04:0,12,198	0/0:22,0:22:51.18:0,51,2084	0/0:11,0:11:19.13:0,19,586	0/0:38,0:37:42.61:0,43,1281	1/1:6,19:24:56.77:1439,57,0	0/0:25,0:25:48.61:0,49,1796	0/0:22,0:22:60.21:0,60,2179	0/0:15,0:15:12.88:0,13,388	0/0:25,0:25:36.30:0,36,864	0/0:12,0:12:23.11:0,23,700	0/0:16,0:16:18.06:0,18,731	0/0:19,0:19:38.25:0,38,1209	0/0:21,0:21:32.99:0,33,1252	0/0:29,0:29:45.20:0,45,1552	0/0:16,0:14:39.12:0,39,1052	1/1:14,2:14:15:250,15,0	1/1:5,5:9:3.01:83,3,0	1/1:22,13:32:3.39:31,3,0	0/0:19,0:16:15.61:0,16,377	0/0:13,0:13:13.53:0,14,459	0/0:24,0:23:9.37:0,9,287	0/0:16,0:15:45.15:0,45,1881	0/0:29,0:29:87.30:0,87,3182	0/0:12,0:12:30.10:0,30,1173	0/0:16,0:15:42.14:0,42,1614
chr10	10569135	.	GCACA	G	898.63	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=1.639;DP=535;FS=0.000;HRun=0;HaplotypeScore=187.6063;InbreedingCoeff=0.8315;MQ=46.57;MQ0=14;MQRankSum=-3.914;QD=15.77;ReadPosRankSum=1.080;VQSLOD=3.1722;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:19.10:0,19,497	0/0:9,0:9:12.04:0,12,282	0/0:7,0:3:8.99:0,9,153	0/0:16,0:7:18.03:0,18,259	0/0:22,0:22:51.18:0,51,1383	0/0:12,0:12:22.14:0,22,459	0/0:38,0:37:40.96:0,41,927	1/1:21,0:20:51.14:698,51,0	0/0:26,0:26:51.75:0,52,1251	0/0:23,0:23:63.22:0,63,1519	0/0:15,0:15:12.78:0,13,262	0/0:25,0:25:36.30:0,36,565	0/0:13,0:13:26.12:0,26,544	0/0:19,0:19:27.09:0,27,669	0/0:20,0:20:41.26:0,41,852	0/0:24,0:24:42.14:0,42,1049	0/0:30,0:30:52.59:0,53,1025	0/0:16,0:14:41.99:0,42,742	1/1:3,4:5:15.05:282,15,0	1/1:5,1:6:3.01:47,3,0	1/1:17,6:20:0.47:1,0,0	0/0:20,0:17:19.40:0,19,331	0/0:13,0:13:16.15:0,16,392	0/0:25,0:24:12.50:0,12,254	0/0:16,0:15:45.15:0,45,1242	0/0:31,0:31:93.32:0,93,2264	0/0:12,0:12:30.10:0,30,782	0/0:16,0:15:42.14:0,42,1084
chr10	10569947	.	CTGGTGGTGGTGGTGGTGGTGG	C	6845.91	PASS	AC=38;AF=0.704;AN=54;BaseQRankSum=5.352;DP=498;FS=17.903;HRun=0;HaplotypeScore=215.2630;InbreedingCoeff=0.6277;MQ=63.88;MQ0=6;MQRankSum=-4.391;QD=18.02;ReadPosRankSum=2.817;VQSLOD=2.6098;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:17,19:36:3.01:167,3,0	1/1:4,7:11:9.03:386,9,0	0/0:20,0:13:3.01:0,3,31	0/0:21,0:16:5.51:0,6,54	0/0:10,0:10:6.02:0,6,510	1/1:12,10:22:15.05:773,15,0	1/1:18,0:18:18.05:274,18,0	0/0:10,0:10:9.03:0,9,391	1/1:3,11:14:9.03:502,9,0	1/1:19,7:26:12.92:531,13,0	1/1:11,7:18:0.94:2,1,0	1/1:14,17:31:5.88:182,6,0	1/1:16,0:16:12:281,12,0	1/1:6,16:22:6:334,6,0	1/1:7,11:18:11.71:530,12,0	1/1:9,5:14:5.75:117,6,0	1/1:9,18:28:2.98:147,3,0	1/1:6,9:14:8.99:501,9,0	0/0:6,0:6:6.02:0,6,587	0/0:5,0:5:6.02:0,6,271	0/0:27,0:26:24.08:0,24,1499	1/1:10,8:18:9.03:502,9,0	./.	1/1:12,15:27:6.02:334,6,0	0/0:11,0:10:12.04:0,12,1040	1/1:15,12:25:27.95:1064,28,0	1/1:5,5:10:2.43:145,2,0	1/1:9,0:9:3.01:73,3,0
chr10	10570691	.	T	TA	7553.26	PASS	AB=0.652;AC=45;AF=0.804;AN=56;BaseQRankSum=-0.751;DP=555;FS=14.213;HRun=13;HaplotypeScore=94.1341;InbreedingCoeff=0.5816;MQ=69.00;MQ0=1;MQRankSum=0.591;QD=15.67;ReadPosRankSum=0.204;VQSLOD=4.2978;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,31:32:81.09:751,81,0	1/1:4,4:8:9.01:84,9,0	0/0:15,0:12:5.91:0,6,66	0/0:17,0:13:4.82:0,5,79	0/0:22,1:24:12.77:0,13,224	1/1:5,15:20:12.51:252,13,0	1/1:4,13:17:12.46:258,12,0	1/1:10,22:34:27.70:513,28,0	0/1:6,5:11:20.14:118,0,20	1/1:10,16:27:24.76:352,25,0	1/1:5,13:18:12.46:250,12,0	1/1:6,17:24:24.31:356,24,0	1/1:4,11:15:32.95:298,33,0	1/1:2,15:17:18.42:302,18,0	1/1:3,14:18:41.89:376,42,0	1/1:6,13:19:27.03:251,27,0	1/1:8,27:36:60.18:677,60,0	1/1:4,17:21:36.04:334,36,0	1/1:6,13:21:18.28:294,18,0	1/1:2,17:19:35.95:317,36,0	1/1:13,9:21:38.74:332,39,0	0/1:5,5:11:2.77:100,0,3	1/1:7,8:16:15.80:127,16,0	1/1:8,10:18:9.44:226,9,0	0/0:17,0:17:29.62:0,30,204	0/1:9,14:23:31.29:302,0,31	1/1:3,16:19:27.48:397,27,0	1/1:3,11:16:29.04:287,29,0
chr10	10571939	.	C	CGT	124.39	PASS	AB=0.832;AC=3;AF=0.054;AN=56;BaseQRankSum=3.729;DP=419;FS=23.082;HRun=0;HaplotypeScore=52.9254;InbreedingCoeff=-0.0642;MQ=81.93;MQ0=0;MQRankSum=-3.749;QD=4.78;ReadPosRankSum=0.185;VQSLOD=0.7785;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:51.17:0,51,832	0/1:4,2:6:99:100,0,178	0/0:9,0:9:27.05:0,27,411	0/0:16,0:16:42.99:0,43,642	0/0:11,0:11:33.09:0,33,488	0/0:16,0:16:48.15:0,48,756	0/0:14,0:14:42.14:0,42,683	0/0:22,0:22:63.20:0,63,1002	0/0:13,0:13:39.13:0,39,636	0/1:7,1:8:36:36,0,319	0/0:2,2:4:6.02:0,6,98	0/0:19,0:19:57.19:0,57,927	0/0:12,0:12:36.12:0,36,587	0/0:13,0:12:36.12:0,36,576	0/0:11,0:11:33.10:0,33,516	0/0:10,0:10:30.10:0,30,489	0/0:29,0:29:81.28:0,81,1322	0/0:28,0:28:78.27:0,78,1272	0/0:20,0:20:57.19:0,57,918	0/0:3,13:16:7.63:0,8,146	0/0:51,0:51:99:0,153,2449	0/0:8,0:8:24.08:0,24,392	0/0:7,2:9:18.06:0,18,294	0/0:11,0:11:33.11:0,33,538	0/0:14,0:14:39.10:0,39,588	0/0:11,0:11:30.08:0,30,467	0/0:7,0:7:21.07:0,21,342	0/1:10,2:12:87.96:88,0,407
chr10	10572119	.	A	AC	90.20	PASS	AB=0.917;AC=6;AF=0.214;AN=28;BaseQRankSum=1.302;DP=110;FS=9.284;HRun=0;HaplotypeScore=24.2620;InbreedingCoeff=0.0356;MQ=99.14;MQ0=1;MQRankSum=-1.539;QD=5.31;ReadPosRankSum=-4.162;VQSLOD=0.7208;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:6,0:6:16.60:0,17,196	0/0:9,0:9:23.57:0,24,300	0/0:20,0:20:60.18:0,60,818	0/0:1,0:1:3:0,3,28	./.	0/1:6,0:6:3.14:71,0,3	0/1:4,0:4:18.98:19,0,33	0/1:1,1:2:33.46:39,0,33	./.	0/0:3,0:3:9.02:0,9,101	./.	./.	1/1:2,0:2:3:25,3,0	./.	./.	0/0:6,0:6:6.02:0,6,69	0/1:3,0:3:36.50:36,0,37	./.	./.	./.	./.	0/0:1,0:1:3.01:0,3,39	0/0:19,0:19:57.18:0,57,779	0/0:3,0:3:9.01:0,9,88	./.	./.
chr10	10572121	.	A	AT	431.28	PASS	AB=0.961;AC=28;AF=0.500;AN=56;BaseQRankSum=3.231;DP=228;FS=5.815;HRun=1;HaplotypeScore=106.3112;InbreedingCoeff=0.1737;MQ=72.38;MQ0=1;MQRankSum=-6.504;QD=2.91;ReadPosRankSum=-1.437;VQSLOD=-0.7275;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:4:2.94:0,3,19	0/0:1,0:1:0.47:0,0,1	0/0:6,0:6:17.19:0,17,144	0/0:9,0:9:23.29:0,23,295	0/0:21,0:21:60.19:0,60,809	1/1:4,0:4:4.82:32,5,0	0/1:7,0:7:10.11:18,0,10	0/1:13,1:14:40.80:41,0,82	0/1:14,0:14:17.61:63,0,18	0/1:10,0:10:18.10:18,0,18	1/1:5,0:5:2.19:10,2,0	1/1:7,0:7:6.67:86,7,0	1/1:3,0:3:5.54:25,6,0	1/1:8,2:9:6.68:18,7,0	0/1:5,1:6:5.17:5,0,15	0/1:4,0:4:0.55:1,0,1	0/0:2,3:4:1.82:0,2,5	1/1:5,4:9:5.61:53,6,0	0/1:11,2:14:69.59:70,0,80	0/0:10,0:10:12.15:0,12,122	1/1:6,0:6:2.68:11,3,0	1/1:3,0:3:4.30:16,4,0	0/1:9,0:9:15.75:16,0,25	0/0:5,0:5:0.47:0,0,1	0/0:19,0:19:57.17:0,57,761	1/1:8,0:8:15.13:97,15,0	0/1:13,0:12:7.79:8,0,22	0/1:2,0:2:0.09:0,0,0
chr10	10572464	.	TA	T	13084	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=11.610;DP=613;FS=2.908;HRun=5;HaplotypeScore=60.2724;InbreedingCoeff=0.9895;MQ=67.13;MQ0=0;MQRankSum=-0.264;QD=30.57;ReadPosRankSum=4.807;VQSLOD=5.3675;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:69.20:0,69,908	1/1:0,6:6:18.05:204,18,0	0/0:15,0:15:36.03:0,36,406	0/0:8,0:5:9.03:0,9,123	0/0:26,0:26:75.24:0,75,1006	1/1:0,23:23:66.19:748,66,0	1/1:1,28:29:78.22:885,78,0	0/0:32,0:32:81.26:0,81,1091	1/1:2,24:26:72.21:816,72,0	1/1:1,34:35:99:1175,105,0	1/1:1,23:24:57.09:630,57,0	1/1:2,27:29:75.21:850,75,0	1/1:0,21:21:57.16:646,57,0	1/1:2,14:16:42.12:476,42,0	1/1:1,24:25:63.18:715,63,0	1/1:0,27:27:72.21:816,72,0	1/1:1,25:26:63.18:714,63,0	1/1:0,16:16:45.04:493,45,0	0/0:16,0:16:48.14:0,48,623	0/0:28,0:28:81.27:0,81,1107	0/0:23,0:23:66.21:0,66,887	1/1:0,15:15:45.04:493,45,0	1/1:0,17:17:51.15:578,51,0	1/1:1,16:17:48.14:544,48,0	0/0:12,0:12:33.11:0,33,451	1/1:0,27:27:81.21:906,81,0	1/1:3,32:35:84.24:953,84,0	1/1:2,12:14:39.11:442,39,0
chr10	10574045	.	GT	G	2069.75	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=7.977;DP=676;FS=2.990;HRun=10;HaplotypeScore=68.3730;InbreedingCoeff=0.9879;MQ=70.10;MQ0=0;MQRankSum=2.164;QD=20.09;ReadPosRankSum=-2.119;VQSLOD=3.8360;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:54.62:0,55,597	0/0:12,0:12:33.09:0,33,365	0/0:17,0:16:26.33:0,26,219	0/0:13,0:13:15.24:0,15,138	0/0:44,2:46:71.19:0,71,1222	0/0:30,0:31:90.51:0,91,950	0/0:22,0:22:51.13:0,51,554	1/1:5,27:32:80.89:685,81,0	0/0:20,0:20:31.49:0,31,556	0/0:29,0:29:72.19:0,72,791	0/0:23,3:26:17.08:0,17,637	0/0:20,0:20:48.13:0,48,530	0/0:21,0:21:54.11:0,54,585	0/0:23,0:23:66.13:0,66,707	0/0:21,0:21:51.11:0,51,544	0/0:25,1:26:40.01:0,40,635	0/0:25,0:25:56.21:0,56,641	0/0:16,0:16:33.05:0,33,350	1/1:3,20:23:59.98:521,60,0	1/1:3,31:34:89.85:764,90,0	1/1:2,12:14:29.99:260,30,0	0/0:33,1:35:67.03:0,67,950	0/0:25,0:25:61.33:0,61,635	0/0:22,0:22:57.13:0,57,620	0/0:20,0:20:55.37:0,55,584	0/0:34,0:34:67.96:0,68,937	0/0:37,0:37:96.22:0,96,1048	0/0:7,0:7:15.04:0,15,166
chr10	10574188	.	TACAAACAA	T	15491.38	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-1.619;DP=606;FS=17.783;HRun=0;HaplotypeScore=179.6199;InbreedingCoeff=0.9744;MQ=58.67;MQ0=2;MQRankSum=-14.569;QD=41.31;ReadPosRankSum=2.485;VQSLOD=3.1683;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:28:59.90:0,60,488	1/1:4,4:8:9.03:227,9,0	0/0:32,0:29:27.09:0,27,902	0/0:16,0:15:27.09:0,27,1043	0/0:33,0:33:69.24:0,69,2867	1/1:14,19:33:54.18:1380,54,0	1/1:9,8:17:15.05:363,15,0	0/0:16,0:27:56.98:0,57,664	1/1:5,13:18:36.12:923,36,0	1/1:14,16:30:48.16:1231,48,0	1/1:4,12:16:33.11:846,33,0	1/1:4,14:18:42.14:1076,42,0	1/1:9,11:20:33.11:843,33,0	1/1:7,13:20:36.12:923,36,0	1/1:7,13:20:33.11:842,33,0	1/1:9,19:28:51.17:1307,51,0	1/1:11,10:21:27.09:692,27,0	1/1:7,8:16:20.43:469,20,0	0/0:5,0:13:23.97:0,24,200	0/0:12,0:36:74.88:0,75,674	0/0:9,0:28:50.96:0,51,444	1/1:7,14:21:42.14:1055,42,0	1/1:6,14:20:35.83:895,36,0	1/1:8,6:14:10.72:300,11,0	0/0:18,0:18:42.14:0,42,1709	1/1:9,4:13:12.04:275,12,0	1/1:12,18:30:54.18:1384,54,0	1/1:4,8:12:18.06:461,18,0
chr10	10576040	.	GCATGCACACACACACA	G	1584.07	PASS	AB=0.656;AC=7;AF=0.125;AN=56;BaseQRankSum=7.154;DP=808;FS=6.948;HRun=0;HaplotypeScore=333.7369;InbreedingCoeff=0.7912;MQ=59.62;MQ0=18;MQRankSum=-3.529;QD=13.09;ReadPosRankSum=-2.928;VQSLOD=0.9620;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:48:60.29:0,60,3160	0/0:13,0:13:30.10:0,30,1633	0/0:38,0:17:44.81:0,45,839	0/0:49,0:23:13.39:0,13,774	0/0:23,0:23:63.20:0,63,3166	0/0:24,0:24:63.22:0,63,2804	0/0:30,0:30:71.97:0,72,2978	1/1:32,9:37:1.06:349,1,0	0/0:25,0:25:63:0,63,2711	0/0:24,0:22:66.22:0,66,3172	0/0:13,0:13:27.56:0,28,977	0/0:21,0:21:57.18:0,57,3078	0/0:23,0:23:60.20:0,60,3386	0/0:27,0:27:69.02:0,69,3096	0/0:37,0:37:99:0,105,5807	0/0:37,0:37:99:0,108,5840	0/0:45,0:45:99:0,110,5643	0/0:25,0:25:66.23:0,66,3766	1/1:6,12:17:19.39:634,19,0	1/1:6,14:21:20.83:654,21,0	0/1:19,21:40:4.74:83,0,5	0/0:19,0:19:54.19:0,54,3332	0/0:18,0:18:44.58:0,45,2060	0/0:49,0:49:99:0,123,6127	0/0:23,0:23:63.01:0,63,2973	0/0:31,0:31:87.30:0,87,3247	0/0:29,0:29:83.63:0,84,3486	0/0:16,0:15:45.15:0,45,2268
chr10	10576042	.	ATG	A	377.16	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=5.767;DP=802;FS=21.672;HRun=0;HaplotypeScore=143.5260;InbreedingCoeff=0.4867;MQ=58.82;MQ0=19;MQRankSum=-1.942;QD=2.99;ReadPosRankSum=0.454;VQSLOD=1.1595;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:37,9:46:30.97:380,31,0	0/0:12,0:12:23.97:0,24,465	0/0:37,0:16:44.73:0,45,554	0/0:46,0:21:17.21:0,17,617	0/0:24,0:24:65.13:0,65,962	0/0:25,0:25:60.21:0,60,944	0/0:29,1:30:70.64:0,71,1141	0/1:41,0:37:22.98:61,0,23	0/0:26,0:26:65.42:0,65,1024	0/0:25,0:23:63.11:0,63,1038	0/0:12,1:13:22.07:0,22,259	0/0:21,0:21:60.17:0,60,1064	0/0:22,0:22:56.77:0,57,919	0/0:28,0:28:71.91:0,72,1146	0/0:38,0:38:99:0,108,1786	0/0:36,0:36:99:0,105,1615	0/0:45,0:45:99:0,102,1712	0/0:25,0:25:65.41:0,65,1099	0/1:18,0:17:3.27:26,0,3	0/1:21,0:20:5.86:34,0,6	0/0:40,0:39:8.44:0,8,26	0/0:18,0:18:54.19:0,54,1023	0/0:18,0:18:44.43:0,44,752	0/0:48,0:48:99:0,123,1942	0/0:23,0:23:60.88:0,61,956	0/0:29,0:29:65.96:0,66,1463	0/0:30,0:30:73.23:0,73,1275	0/0:17,0:16:47.25:0,47,736
chr10	10576044	.	GCA	G	1168.49	PASS	AB=0.884;AC=22;AF=0.407;AN=54;BaseQRankSum=6.047;DP=805;FS=0.477;HRun=0;HaplotypeScore=141.2208;InbreedingCoeff=-0.2908;MQ=57.96;MQ0=19;MQRankSum=-0.474;QD=2.04;ReadPosRankSum=1.507;VQSLOD=2.5186;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:45,0:45:34.92:359,35,0	0/1:10,3:13:9.43:9,0,270	./.	0/0:44,0:19:3.01:0,3,44	0/1:21,5:26:91.91:92,0,405	0/1:21,6:27:91.93:92,0,381	0/1:24,6:30:6.47:6,0,416	0/0:39,0:35:8.79:0,9,53	0/1:23,2:25:3.48:3,0,343	0/0:27,0:27:13.74:0,14,420	0/0:10,0:17:17.60:0,18,173	0/0:19,0:19:36.10:0,36,511	0/1:15,6:21:99:119,0,428	0/1:23,4:27:6.50:6,0,273	0/1:31,5:36:61.84:62,0,813	0/1:27,7:34:99:171,0,497	0/1:37,6:45:44.99:45,0,742	0/1:21,5:26:52.35:52,0,540	0/1:17,0:16:24.68:25,0,34	1/1:21,0:20:10.60:49,11,0	0/1:42,0:41:0:0,0,0	0/0:19,0:19:42.11:0,42,581	0/1:19,1:20:9.44:9,0,271	0/1:38,9:47:87:87,0,782	0/1:20,3:24:87.61:88,0,201	0/0:30,0:30:14.53:0,15,334	0/1:28,0:29:0.40:0,0,511	0/1:17,0:16:45.98:46,0,265
chr10	10576315	.	GC	G	8178.63	PASS	AB=0.556;AC=47;AF=0.839;AN=56;BaseQRankSum=-0.283;DP=419;FS=0.529;HRun=7;HaplotypeScore=54.8812;InbreedingCoeff=0.8983;MQ=79.36;MQ0=1;MQRankSum=-3.381;QD=23.37;ReadPosRankSum=3.315;VQSLOD=4.7657;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,34:36:87.20:887,87,0	1/1:0,8:8:21.05:214,21,0	0/0:17,0:17:36.46:0,36,469	0/0:16,0:16:35.92:0,36,404	0/0:21,0:21:51.13:0,51,612	1/1:1,0:17:30.56:90,31,0	1/1:0,0:11:20.55:60,21,0	1/1:4,15:19:39.08:397,39,0	0/1:2,0:10:2.62:24,0,3	1/1:1,15:16:42.05:417,42,0	1/1:1,6:7:18.04:183,18,0	1/1:0,12:12:33.07:336,33,0	1/1:0,12:12:36.08:367,36,0	1/1:2,13:15:33.07:337,33,0	1/1:0,14:14:39.09:398,39,0	1/1:2,5:7:12.03:122,12,0	1/1:0,18:18:48.11:489,48,0	1/1:1,16:18:38.12:373,38,0	1/1:0,12:12:36.08:366,36,0	1/1:1,18:19:45.10:459,45,0	1/1:2,12:14:33.07:336,33,0	1/1:0,10:10:27.06:275,27,0	1/1:0,9:9:27.06:275,27,0	1/1:1,21:22:57.13:581,57,0	0/0:15,0:15:45.13:0,45,553	1/1:1,15:16:45.10:456,45,0	1/1:1,18:19:51.12:520,51,0	1/1:1,7:8:21.05:214,21,0
chr10	10576649	.	TCA	T	8806.16	PASS	AB=0.981;AC=41;AF=0.732;AN=56;BaseQRankSum=13.356;DP=650;FS=35.516;HRun=0;HaplotypeScore=156.5656;InbreedingCoeff=0.8671;MQ=55.95;MQ0=16;MQRankSum=-3.679;QD=17.79;ReadPosRankSum=10.106;VQSLOD=2.8983;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:13,32:45:53:661,53,0	1/1:3,7:10:18.03:225,18,0	0/1:51,1:22:43.81:44,0,392	0/0:42,1:21:35.57:0,36,545	0/0:15,0:15:35.91:0,36,544	1/1:2,17:19:38.80:494,39,0	1/1:12,21:33:42.08:505,42,0	0/0:16,0:16:33.11:0,33,528	1/1:5,10:15:12.04:152,12,0	1/1:2,24:26:69.02:738,69,0	1/1:2,5:7:6.02:76,6,0	1/1:4,22:26:41.73:526,42,0	1/1:5,12:14:27.09:343,27,0	1/1:3,24:27:48.15:609,48,0	1/1:3,24:27:54.14:667,54,0	1/1:4,18:22:39.12:488,39,0	1/1:2,29:31:47.96:605,48,0	1/1:9,19:28:45.14:569,45,0	0/0:18,0:18:39.12:0,39,584	0/0:11,0:10:24.08:0,24,373	0/0:38,0:36:81.25:0,81,1258	1/1:3,13:16:15.05:190,15,0	1/1:1,5:6:8.77:113,9,0	1/1:9,37:45:69.10:837,69,0	0/0:13,1:14:33.11:0,33,519	1/1:2,16:18:38.89:371,39,0	1/1:2,16:18:38.57:441,39,0	1/1:0,6:6:12.04:152,12,0
chr10	10577110	.	G	GTA	2487.01	PASS	AB=0.953;AC=31;AF=0.554;AN=56;BaseQRankSum=6.918;DP=540;FS=18.689;HRun=0;HaplotypeScore=113.4302;InbreedingCoeff=-0.2323;MQ=45.35;MQ0=27;MQRankSum=2.222;QD=5.49;ReadPosRankSum=3.999;VQSLOD=1.8632;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:22:23.93:0,24,189	1/1:5,0:3:3:25,3,0	0/0:19,0:4:8.99:0,9,90	0/0:39,0:12:21.75:0,22,212	0/0:5,0:5:11.96:0,12,94	1/1:14,0:13:20.78:182,21,0	0/1:31,0:28:66.68:70,0,67	0/1:33,0:32:56.14:348,0,56	0/1:18,0:17:59.41:59,0,108	0/1:16,0:15:79.42:164,0,79	0/1:9,0:8:35.93:39,0,36	0/1:9,15:25:39.44:48,0,39	0/1:6,10:14:50.97:51,0,68	1/1:15,0:15:14.93:149,15,0	1/1:19,0:17:11.36:82,11,0	0/1:23,0:22:1.70:82,0,2	0/1:28,0:28:24.17:247,0,24	0/1:22,0:20:93.18:150,0,93	0/1:8,0:8:44.03:71,0,44	1/1:0,0:11:0.47:1,0,0	0/1:52,1:50:56.79:386,0,57	0/1:15,0:12:18.96:19,0,19	0/1:14,0:10:16.11:40,0,16	1/1:22,0:21:14.77:115,15,0	0/1:11,0:10:1.94:2,0,85	0/1:21,0:20:77.30:159,0,77	0/1:15,0:13:26.20:58,0,26	1/1:9,0:6:14.88:107,15,0
chr10	10578879	.	GGTGTGTGTGT	G	1948.27	PASS	AB=0.733;AC=25;AF=0.521;AN=48;BaseQRankSum=5.662;DP=567;FS=3.022;HRun=0;HaplotypeScore=150.6336;InbreedingCoeff=0.5814;MQ=66.07;MQ0=14;MQRankSum=-4.464;QD=7.30;ReadPosRankSum=3.421;VQSLOD=2.6865;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:18.06:0,18,718	./.	0/0:34,0:20:0.89:0,1,2	0/0:32,0:26:0.47:0,0,1	0/0:13,0:13:9.03:0,9,308	0/0:10,0:10:2.04:0,2,6	1/1:37,0:44:7.27:143,7,0	0/0:16,0:15:6.02:0,6,192	1/1:8,0:13:12.04:279,12,0	1/1:13,3:17:9.02:188,9,0	1/1:9,0:9:3.47:30,3,0	1/1:20,3:26:21.07:496,21,0	1/1:18,5:23:14.87:324,15,0	./.	1/1:10,0:11:3.01:70,3,0	0/0:10,0:10:0.47:0,0,1	1/1:31,0:31:3:62,3,0	1/1:21,3:23:11.93:222,12,0	0/0:25,0:25:42.59:0,43,1446	0/0:13,0:12:21.07:0,21,939	0/0:36,0:37:27.56:0,28,1066	1/1:9,0:8:2.97:21,3,0	./.	1/1:19,5:25:3.01:70,3,0	0/0:11,0:11:15.05:0,15,567	./.	1/1:21,0:21:6.02:122,6,0	0/1:7,4:10:82.28:82,0,98
chr10	10580003	.	AT	A	12458.90	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=14.637;DP=640;FS=5.301;HRun=1;HaplotypeScore=209.7829;InbreedingCoeff=0.9936;MQ=84.44;MQ0=0;MQRankSum=-10.002;QD=23.69;ReadPosRankSum=4.571;VQSLOD=4.6961;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,24:30:76.44:623,76,0	1/1:1,9:10:29.31:230,29,0	0/0:30,0:30:84.53:0,85,1262	0/0:24,0:24:70.79:0,71,1076	0/0:35,0:35:99:0,105,1607	1/1:1,13:14:38.60:338,39,0	1/1:7,27:34:82.11:681,82,0	1/1:0,26:26:69.97:573,70,0	1/1:2,24:26:71.76:646,72,0	1/1:1,13:14:38.43:309,38,0	1/1:3,7:10:20.82:148,21,0	1/1:1,19:20:60.01:562,60,0	1/1:1,13:14:38.96:355,39,0	1/1:1,21:22:65.93:633,66,0	1/1:0,27:27:77.91:696,78,0	1/1:6,29:35:99:942,104,0	1/1:0,28:28:75.07:736,75,0	1/1:7,24:31:86.64:827,87,0	1/1:2,12:14:41.97:381,42,0	1/1:3,15:18:47.69:398,48,0	1/1:6,27:33:68.15:625,68,0	1/1:3,18:21:41.92:368,42,0	1/1:4,11:15:28.65:223,29,0	1/1:5,35:40:99:1010,107,0	0/0:25,0:25:75.25:0,75,1186	1/1:4,17:21:60.44:569,60,0	1/1:4,14:18:53.62:460,54,0	1/1:1,4:5:14.69:126,15,0
chr10	10580005	.	GGT	G	19052.60	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=14.489;DP=639;FS=0.779;HRun=0;HaplotypeScore=196.8959;InbreedingCoeff=0.9910;MQ=86.78;MQ0=0;MQRankSum=-9.786;QD=36.43;ReadPosRankSum=6.079;VQSLOD=5.1324;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:28:60.42:904,60,0	1/1:10,0:10:27.09:387,27,0	0/0:32,0:32:95.77:0,96,1696	0/0:25,0:25:74.30:0,74,1338	0/0:33,0:33:99:0,99,1984	1/1:15,0:15:45.06:593,45,0	1/1:33,0:33:84.10:1123,84,0	1/1:26,0:26:75.15:1025,75,0	1/1:28,0:28:72.13:1006,72,0	1/1:16,0:16:45.14:629,45,0	1/1:9,0:9:21.03:277,21,0	1/1:20,0:20:60.20:860,60,0	1/1:14,0:14:39.09:540,39,0	1/1:22,0:22:66.22:962,66,0	1/1:27,0:27:72.24:1053,72,0	1/1:34,0:34:96.24:1358,96,0	1/1:29,0:29:75.72:1090,76,0	1/1:31,0:30:81.22:1132,81,0	1/1:13,0:13:39.13:571,39,0	1/1:18,0:18:45.10:619,45,0	1/1:31,0:31:68.01:924,68,0	1/1:21,0:21:34.98:524,35,0	1/1:12,4:16:21.46:285,21,0	1/1:39,0:39:99:1423,102,0	0/0:26,0:26:78.20:0,78,1462	1/1:21,0:21:63.16:880,63,0	1/1:16,0:16:48.15:690,48,0	1/1:6,0:6:13.28:196,13,0
chr10	10580006	.	GT	G	10896.32	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=15.265;DP=641;FS=3.313;HRun=1;HaplotypeScore=214.1379;InbreedingCoeff=0.9950;MQ=86.16;MQ0=0;MQRankSum=-11.261;QD=20.68;ReadPosRankSum=4.879;VQSLOD=4.9693;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,25:28:52.54:465,53,0	1/1:1,9:10:26.19:189,26,0	0/0:31,1:32:67.37:0,67,1322	0/0:24,0:24:72.01:0,72,1020	0/0:33,0:33:99:0,99,1582	1/1:3,13:16:46.88:366,47,0	1/1:6,27:33:73.62:564,74,0	1/1:1,26:27:67.09:509,67,0	1/1:4,24:28:77.23:626,77,0	1/1:3,13:16:44.18:330,44,0	1/1:2,8:10:23.60:151,24,0	1/1:1,19:20:59.82:502,60,0	1/1:1,13:14:36.38:303,36,0	1/1:1,21:22:65.77:569,66,0	1/1:0,27:27:71.76:587,72,0	1/1:4,29:33:93.96:778,94,0	1/1:2,28:30:80.87:713,81,0	1/1:6,24:30:77.53:687,78,0	1/1:4,12:16:47.81:391,48,0	1/1:3,15:18:41.82:320,42,0	1/1:4,27:31:63.25:539,63,0	1/1:0,18:21:38.83:313,39,0	1/1:5,11:16:20.82:153,21,0	1/1:3,35:38:98.04:847,98,0	0/0:25,0:25:72.23:0,72,1128	1/1:4,17:21:58.08:505,58,0	1/1:0,14:16:46.16:359,46,0	1/1:2,4:6:17.18:131,17,0
chr10	10582054	.	TTGTGTGTATGTG	T	8321.67	PASS	AB=0.568;AC=42;AF=0.750;AN=56;BaseQRankSum=0.007;DP=788;FS=13.513;HRun=0;HaplotypeScore=198.7917;InbreedingCoeff=0.6544;MQ=62.65;MQ0=22;MQRankSum=0.834;QD=14.70;ReadPosRankSum=1.554;VQSLOD=3.0932;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:41,0:40:50.89:516,51,0	1/1:9,0:9:20.95:224,21,0	0/0:58,0:29:35.34:0,35,369	0/0:64,0:28:35.48:0,35,448	0/0:21,0:21:39.03:0,39,763	1/1:2,0:13:3.40:18,3,0	1/1:33,0:32:44.45:661,44,0	1/1:23,0:22:44.86:371,45,0	1/1:2,0:26:1.73:142,2,0	1/1:28,0:27:72.91:783,73,0	1/1:16,0:16:36.54:375,37,0	1/1:6,30:38:11.43:91,11,0	1/1:2,33:35:8.54:203,9,0	1/1:1,28:30:17.44:425,17,0	0/1:2,18:22:5.36:224,0,5	1/1:1,25:27:5.31:128,5,0	1/1:8,30:36:14.96:311,15,0	0/1:7,13:21:4.24:242,0,4	1/1:12,0:11:30:298,30,0	1/1:16,1:15:32.97:339,33,0	1/1:57,0:57:99:1256,117,0	1/1:2,13:14:5.05:74,5,0	0/0:19,0:18:2.95:0,3,23	0/0:4,0:36:1.66:0,2,11	0/0:21,0:21:51.10:0,51,1529	1/1:1,19:20:50.72:496,51,0	1/1:25,2:25:52.68:574,53,0	1/1:14,2:17:40.92:568,41,0
chr10	10582060	.	GTA	G	5115.94	PASS	AB=1.000;AC=44;AF=0.786;AN=56;BaseQRankSum=-2.075;DP=746;FS=0.462;HRun=0;HaplotypeScore=121.4325;InbreedingCoeff=0.5618;MQ=59.34;MQ0=27;MQRankSum=0.321;QD=8.58;ReadPosRankSum=4.257;VQSLOD=4.3645;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:38,0:37:57.20:507,57,0	1/1:9,0:9:11.38:110,11,0	0/0:49,0:21:44.97:0,45,348	0/0:61,0:25:34.30:0,34,445	0/0:21,0:21:40.97:0,41,353	1/1:12,0:11:5.92:42,6,0	1/1:34,0:32:82.75:644,83,0	1/1:19,0:18:44.85:369,45,0	0/1:26,0:26:12.49:16,0,12	1/1:25,0:27:46.46:561,46,0	1/1:11,0:13:26.85:261,27,0	1/1:34,0:34:9.18:54,9,0	0/1:34,0:34:5.89:14,0,6	1/1:31,0:30:5.70:68,6,0	1/1:20,0:20:6.82:54,7,0	1/1:27,0:26:5.23:38,5,0	1/1:38,0:36:7.13:64,7,0	1/1:19,0:18:7.71:54,8,0	1/1:10,0:11:8.76:188,9,0	1/1:17,0:15:12.64:168,13,0	1/1:48,0:54:86.71:779,87,0	0/1:15,0:14:3.95:19,0,4	1/1:2,17:18:5.98:48,6,0	0/1:35,0:34:0:0,0,0	0/0:18,0:18:50.79:0,51,499	1/1:19,0:19:37.64:375,38,0	1/1:24,0:21:53.34:391,53,0	1/1:16,0:16:34.17:291,34,0
chr10	10582062	.	A	ATGTG	123.60	PASS	AB=1.000;AC=12;AF=0.240;AN=50;BaseQRankSum=-1.484;DP=755;FS=13.496;HRun=0;HaplotypeScore=162.0055;InbreedingCoeff=0.1180;MQ=57.49;MQ0=27;MQRankSum=-0.485;QD=0.46;ReadPosRankSum=-0.882;VQSLOD=2.0679;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:37:3.94:0,4,27	0/0:9,0:9:6:0,6,54	./.	0/1:60,0:23:0:0,0,0	1/1:15,7:22:3.01:36,3,0	./.	0/1:35,0:33:2.44:2,0,29	1/1:18,0:17:2.88:15,3,0	0/0:27,0:26:0.41:0,0,7	0/1:29,0:28:12.73:13,0,25	0/0:15,0:15:4.03:0,4,18	0/1:34,0:34:0.41:0,0,0	0/1:34,0:34:19.78:20,0,30	0/0:31,0:30:11.69:0,12,94	0/0:22,0:22:4.62:0,5,53	0/0:27,0:26:2.92:0,3,28	0/0:38,0:36:9.32:0,9,83	0/0:19,0:18:8.38:0,8,63	0/0:10,0:10:5.60:0,6,37	0/0:18,0:15:4.18:0,4,17	0/0:58,0:57:11.39:0,11,45	0/0:15,0:14:2.68:0,3,11	1/1:19,0:18:1.24:3,1,0	./.	0/1:19,0:19:25.59:145,0,26	0/0:20,0:20:1.72:0,2,10	0/0:25,0:22:3:0,3,28	0/0:17,0:16:11.68:0,12,90
chr10	10582240	.	GGTGTGTGTGTGTGTGTGTGTGTGT	G	770.41	PASS	AB=1.000;AC=5;AF=0.093;AN=54;BaseQRankSum=3.231;DP=590;FS=0.000;HRun=0;HaplotypeScore=310.7388;InbreedingCoeff=0.5910;MQ=56.07;MQ0=12;MQRankSum=-3.231;QD=12.04;ReadPosRankSum=-1.734;VQSLOD=1.5413;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:20:21.07:0,21,832	0/0:6,0:6:3.01:0,3,92	0/0:22,0:12:9.03:0,9,322	0/0:22,0:17:6.53:0,7,391	0/0:12,0:12:15.05:0,15,1554	0/0:17,0:17:30.10:0,30,2287	0/0:36,0:37:44.18:0,44,2356	0/1:27,0:27:5.40:17,0,5	0/0:21,0:21:30.10:0,30,2051	0/0:25,0:25:30.10:0,30,2578	0/0:14,0:14:15.05:0,15,1117	0/0:24,0:24:42.13:0,42,3547	0/0:21,0:20:24.08:0,24,1752	0/0:20,0:20:18.93:0,19,1270	0/0:17,0:23:30.10:0,30,2026	0/0:22,0:22:42.08:0,42,2851	0/0:27,0:28:60.21:0,60,5078	0/0:20,0:21:24.08:0,24,1824	1/1:13,0:11:2.97:20,3,0	1/1:14,10:24:15.05:845,15,0	0/0:34,0:32:0.47:0,0,1	0/0:13,0:12:9.02:0,9,611	./.	0/0:38,0:38:57.19:0,57,4694	0/0:16,0:16:15.05:0,15,1106	0/0:22,0:22:33.11:0,33,2513	0/0:11,0:11:11.71:0,12,747	0/0:13,0:12:24.08:0,24,2097
chr10	10582394	.	TTGTCTCTGTG	T	2077.38	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=12.096;DP=762;FS=6.706;HRun=0;HaplotypeScore=215.1194;InbreedingCoeff=0.9264;MQ=67.36;MQ0=2;MQRankSum=-1.925;QD=17.03;ReadPosRankSum=-3.810;VQSLOD=0.8806;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:49:99:0,126,4768	0/0:7,0:7:17.28:0,17,561	0/0:39,0:35:66.50:0,66,1162	0/0:67,0:50:60.88:0,61,1773	0/0:22,0:22:57.13:0,57,2067	0/0:20,0:20:51.11:0,51,1853	0/0:26,0:26:63.04:0,63,1945	1/1:7,34:41:99:1183,102,0	0/0:34,0:34:69.17:0,69,2628	0/0:26,0:26:72.21:0,72,2509	0/0:18,0:18:51.05:0,51,1794	0/0:25,0:25:65.76:0,66,2226	0/0:15,0:15:39.10:0,39,1602	0/0:20,0:20:54.12:0,54,1903	0/0:39,0:39:96.28:0,96,3931	0/0:21,0:21:57.15:0,57,2112	0/0:27,0:27:66.12:0,66,2720	0/0:26,0:25:63.06:0,63,2307	1/1:4,17:20:47.94:739,48,0	1/1:3,7:10:9.03:282,9,0	1/1:15,35:50:2.70:20,3,0	0/0:17,0:17:36.07:0,36,1011	0/0:24,0:24:60.17:0,60,2586	0/0:43,0:43:99:0,111,4675	0/0:16,0:16:42.11:0,42,1337	0/0:29,0:29:84.26:0,84,3420	0/0:20,0:20:48.12:0,48,1848	0/0:9,0:9:24.03:0,24,842
chr10	10582568	.	A	AC	4608.15	PASS	AB=0.833;AC=47;AF=0.839;AN=56;BaseQRankSum=7.962;DP=601;FS=33.089;HRun=9;HaplotypeScore=167.0524;InbreedingCoeff=0.7898;MQ=74.71;MQ0=0;MQRankSum=-7.083;QD=8.66;ReadPosRankSum=4.175;VQSLOD=0.9269;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:38,0:38:75.22:312,75,0	1/1:11,0:11:21.43:88,21,0	0/0:16,0:14:12.07:0,12,194	0/0:23,0:21:44.66:0,45,366	0/0:15,1:16:2.73:0,3,253	0/1:8,1:10:3.27:39,0,3	1/1:8,5:13:3.01:33,3,0	1/1:22,0:22:42.51:174,43,0	1/1:9,0:9:8.77:60,9,0	1/1:24,0:24:56.08:227,56,0	1/1:11,0:11:26.78:110,27,0	1/1:25,0:25:60.74:247,61,0	1/1:22,0:22:50.85:208,51,0	1/1:28,0:28:69.64:285,70,0	1/1:28,0:28:69.64:286,70,0	1/1:16,0:16:37.50:154,37,0	1/1:31,0:31:66.96:274,67,0	1/1:22,0:22:49.76:202,50,0	1/1:25,0:25:50.89:209,51,0	1/1:29,0:29:62.75:261,63,0	1/1:34,0:34:69.64:285,70,0	1/1:18,0:18:42.40:171,42,0	1/1:15,0:15:35.70:145,36,0	1/1:32,0:32:53.73:224,54,0	0/0:14,0:14:32.97:0,33,286	1/1:27,0:27:61.18:251,61,0	1/1:29,0:29:64.28:264,64,0	1/1:13,0:13:24.11:99,24,0
chr10	10582572	.	C	CCAT	28261.29	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=0.105;DP=622;FS=11.102;HRun=0;HaplotypeScore=115.1426;InbreedingCoeff=0.9980;MQ=74.50;MQ0=0;MQRankSum=-6.712;QD=54.77;ReadPosRankSum=8.037;VQSLOD=6.3117;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,33:36:90.30:1920,90,0	1/1:1,9:10:24.08:526,24,0	0/0:17,0:15:39.06:0,39,569	0/0:24,0:22:57.15:0,57,893	0/0:17,0:17:45.02:0,45,679	0/0:8,0:8:20.88:0,21,224	0/0:15,0:15:27.40:0,27,313	1/1:2,19:21:60.20:1253,60,0	0/0:10,0:10:23.93:0,24,238	1/1:2,22:26:72.24:1502,72,0	1/1:0,12:12:33.11:710,33,0	1/1:4,23:27:72.09:1538,72,0	1/1:2,20:22:56.99:1252,57,0	1/1:0,28:28:78.27:1712,78,0	1/1:3,28:33:87.30:1869,87,0	1/1:1,15:16:42.14:922,42,0	1/1:2,29:31:75.25:1646,75,0	1/1:3,21:24:57.19:1241,57,0	1/1:5,21:25:63.89:1440,64,0	1/1:3,28:31:81.26:1669,81,0	1/1:1,34:35:78.27:1712,78,0	1/1:1,19:20:48.11:1046,48,0	1/1:0,15:16:42.14:902,42,0	1/1:4,28:33:69.23:1439,69,0	0/0:15,0:15:45.13:0,45,738	1/1:3,23:29:84.25:1692,84,0	1/1:3,27:30:78.09:1678,78,0	1/1:0,10:10:27.09:593,27,0
chr10	10585924	.	C	CT	1693.99	PASS	AB=0.791;AC=45;AF=0.804;AN=56;BaseQRankSum=1.758;DP=515;FS=9.570;HRun=13;HaplotypeScore=77.4517;InbreedingCoeff=0.5118;MQ=64.18;MQ0=9;MQRankSum=-4.477;QD=3.92;ReadPosRankSum=-1.872;VQSLOD=0.1862;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:33,0:30:37.07:189,37,0	1/1:5,0:5:5.68:28,6,0	0/0:27,0:18:10.68:0,11,58	0/0:19,0:11:17.69:0,18,116	0/0:16,0:20:21.78:0,22,135	0/1:8,7:18:3.65:112,0,4	0/1:13,6:19:14.90:157,0,15	1/1:22,0:21:3.87:19,4,0	1/1:4,12:16:35.90:317,36,0	1/1:20,0:20:13.25:62,13,0	1/1:17,0:16:18.29:87,18,0	1/1:11,0:11:5.59:26,6,0	1/1:9,0:9:5.06:21,5,0	1/1:10,0:10:10.34:47,10,0	1/1:24,0:24:17:83,17,0	1/1:12,0:12:11.32:55,11,0	1/1:25,0:25:28.05:145,28,0	1/1:16,0:16:19.89:98,20,0	0/1:17,0:18:6.10:14,0,6	1/1:24,0:22:4.67:18,5,0	1/1:8,0:8:3.27:14,3,0	1/1:18,0:18:14.30:73,14,0	1/1:23,0:22:11.40:57,11,0	1/1:17,0:17:13.61:61,14,0	0/0:15,0:16:19.73:0,20,125	1/1:31,0:31:21.47:116,21,0	1/1:24,0:24:6.11:28,6,0	1/1:8,0:5:7.53:33,8,0
chr10	10585937	.	T	TTTTTC	6487.57	PASS	AB=1.000;AC=39;AF=0.696;AN=56;BaseQRankSum=-4.148;DP=356;FS=0.000;HRun=0;HaplotypeScore=79.7664;InbreedingCoeff=0.6540;MQ=51.25;MQ0=11;MQRankSum=-4.067;QD=24.76;ReadPosRankSum=-0.570;VQSLOD=4.0388;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,18:28:42.05:895,42,0	1/1:0,1:5:6.02:106,6,0	0/0:14,0:7:11.87:0,12,112	0/0:13,0:6:18.04:0,18,213	0/0:16,0:16:38.73:0,39,506	0/1:17,0:16:16.66:17,0,218	0/0:15,0:14:41.67:0,42,372	0/0:8,0:8:17.42:0,17,120	0/0:16,0:16:44.70:0,45,336	1/1:3,8:14:14.89:170,15,0	1/1:3,4:12:20.28:399,20,0	1/1:1,3:8:6.02:179,6,0	1/1:0,10:12:5.72:139,6,0	1/1:1,6:9:15.05:369,15,0	1/1:0,9:13:18.06:451,18,0	1/1:0,7:10:12.04:330,12,0	1/1:14,4:18:41.83:726,42,0	1/1:3,8:13:27.02:641,27,0	0/1:8,0:8:16.70:128,0,17	0/1:10,0:7:21.68:72,0,22	1/1:7,0:6:6.07:52,6,0	1/1:0,4:8:15.05:295,15,0	1/1:2,6:11:12.89:230,13,0	1/1:0,5:9:14.78:252,15,0	0/0:12,0:12:26.76:0,27,342	1/1:1,1:15:38.49:579,38,0	1/1:5,9:20:20.90:267,21,0	1/1:1,5:6:9:191,9,0
chr10	10586082	.	AG	A	11168.90	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=10.812;DP=581;FS=7.272;HRun=2;HaplotypeScore=73.5590;InbreedingCoeff=0.9984;MQ=88.52;MQ0=0;MQRankSum=-5.587;QD=34.47;ReadPosRankSum=4.769;VQSLOD=5.0035;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,38:38:99:1249,102,0	1/1:0,10:10:30.10:390,30,0	0/0:19,1:20:18.25:0,18,733	0/0:29,0:29:74.70:0,75,1069	0/0:21,0:21:63.19:0,63,904	0/0:19,0:19:51.17:0,51,763	0/0:31,0:31:93.22:0,93,1322	0/0:26,0:25:66.20:0,66,936	0/0:21,0:21:60.18:0,60,860	1/1:0,16:16:48.08:589,48,0	1/1:2,11:13:30.05:370,30,0	1/1:0,21:21:48.16:623,48,0	1/1:0,8:8:24.04:290,24,0	1/1:0,19:19:48.13:623,48,0	1/1:0,15:14:36.12:467,36,0	1/1:0,15:15:42.14:545,42,0	1/1:1,34:35:93.30:1207,93,0	1/1:0,24:24:66.21:857,66,0	0/0:25,0:25:72.24:0,72,1076	0/0:19,0:19:54.17:0,54,789	0/0:30,0:30:90.30:0,90,1349	1/1:0,17:17:48.16:623,48,0	1/1:0,18:18:48.08:623,48,0	1/1:0,24:24:66.17:838,66,0	0/0:16,0:16:48.16:0,48,718	1/1:0,24:24:72.22:921,72,0	1/1:0,14:14:42.09:526,42,0	1/1:0,13:13:33.11:428,33,0
chr10	10588014	.	C	CAGAGAGAGAGAGAGAGAGAG	9417.77	PASS	AB=1.000;AC=49;AF=0.875;AN=56;BaseQRankSum=3.085;DP=351;FS=9.542;HRun=0;HaplotypeScore=159.8587;InbreedingCoeff=0.4867;MQ=42.57;MQ0=11;MQRankSum=-4.284;QD=32.14;ReadPosRankSum=-2.512;VQSLOD=3.0083;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:25:12.68:320,13,0	1/1:6,0:4:6.02:239,6,0	0/1:16,0:5:10.77:11,0,191	0/0:30,0:12:19.61:0,20,1014	0/0:14,0:14:27.07:0,27,1095	1/1:15,0:15:3.01:147,3,0	1/1:23,0:23:22.43:835,22,0	1/1:19,0:18:26.63:582,27,0	1/1:9,2:15:0.47:1,0,0	1/1:12,0:12:24.08:1306,24,0	1/1:13,0:13:5.89:174,6,0	1/1:7,0:5:3.01:76,3,0	1/1:6,0:6:3.95:49,4,0	1/1:8,0:8:9.49:335,9,0	1/1:10,0:10:12.03:359,12,0	1/1:13,0:13:6.91:419,7,0	1/1:4,0:4:12.02:303,12,0	1/1:7,0:6:5.99:170,6,0	1/1:15,0:13:30.10:1522,30,0	1/1:9,0:9:6.48:241,6,0	1/1:13,0:12:6.01:97,6,0	1/1:9,0:9:5.99:50,6,0	1/1:10,0:10:6.47:73,6,0	1/1:7,0:6:3:25,3,0	0/0:14,0:13:18.04:0,18,830	1/1:15,0:15:27.09:1381,27,0	1/1:11,0:10:17.37:606,17,0	1/1:4,0:4:6.02:97,6,0
chr10	10588133	.	ATGTGCACATGTGCATG	A	2487.40	PASS	AB=0.820;AC=9;AF=0.161;AN=56;BaseQRankSum=1.479;DP=695;FS=0.000;HRun=0;HaplotypeScore=282.6224;InbreedingCoeff=0.6041;MQ=64.89;MQ0=6;MQRankSum=2.345;QD=12.56;ReadPosRankSum=-2.892;VQSLOD=1.8042;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:35.41:0,35,558	0/0:6,0:6:6.02:0,6,99	0/1:26,0:12:12.71:13,0,64	0/0:25,0:11:11.95:0,12,122	0/0:22,0:22:57.17:0,57,2475	0/0:18,0:18:42.14:0,42,2574	0/0:50,0:50:99:0,117,4985	1/1:3,30:33:85.57:1424,86,0	0/0:21,0:21:54.19:0,54,2590	0/1:19,0:19:13.11:13,0,631	0/0:13,0:13:9.34:0,9,178	0/0:23,0:23:45.15:0,45,855	0/0:13,0:13:30.10:0,30,522	0/0:16,0:15:30.09:0,30,514	0/0:18,0:18:20.99:0,21,313	0/0:17,0:17:18.01:0,18,270	0/0:36,0:36:47.83:0,48,788	0/0:35,0:35:12.96:0,13,338	1/1:5,14:17:44.88:922,45,0	1/1:1,12:13:4.59:259,5,0	0/1:9,77:86:0:0,0,0	0/0:18,0:18:12.51:0,13,227	0/0:17,0:17:14.89:0,15,261	0/0:34,0:34:21.80:0,22,364	0/0:25,0:25:57.20:0,57,2986	0/0:24,0:24:50.97:0,51,1079	0/0:19,0:19:42.10:0,42,764	0/0:7,0:7:18:0,18,326
chr10	10588141	.	ATGTGCATG	A	4589.38	PASS	AB=0.779;AC=36;AF=0.667;AN=54;BaseQRankSum=10.739;DP=666;FS=0.000;HRun=0;HaplotypeScore=182.0037;InbreedingCoeff=0.6075;MQ=61.34;MQ0=8;MQRankSum=-2.482;QD=9.93;ReadPosRankSum=-1.029;VQSLOD=3.4863;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:17,25:42:11.88:307,12,0	./.	0/0:30,0:9:0.07:0,0,32	0/0:27,0:8:0:0,0,0	0/0:20,0:20:33.11:0,33,1092	0/0:21,0:21:42.13:0,42,1411	0/0:50,0:50:78.25:0,78,2355	1/1:30,0:30:43.01:541,43,0	0/0:21,0:21:45.08:0,45,1236	1/1:3,14:17:39.10:687,39,0	0/1:3,9:12:0.21:0,0,1	1/1:10,11:21:21.05:487,21,0	1/1:5,7:12:18.06:408,18,0	1/1:8,4:11:3.01:77,3,0	1/1:4,12:16:6.02:149,6,0	1/1:4,11:15:6.02:149,6,0	1/1:17,15:32:8.95:222,9,0	1/1:7,23:30:8.92:158,9,0	0/1:17,0:15:4.36:276,0,4	1/1:12,0:12:4.96:101,5,0	0/1:78,0:78:0:0,0,0	0/1:3,16:19:0:0,0,1	1/1:5,12:17:3.01:77,3,0	1/1:7,29:36:2.42:77,2,0	0/0:28,0:28:63.19:0,63,1805	1/1:7,14:21:35.62:567,36,0	1/1:13,4:17:11.71:213,12,0	1/1:6,0:6:8.97:93,9,0
chr10	10590235	.	GT	G	4872.32	PASS	AB=0.692;AC=42;AF=0.750;AN=56;BaseQRankSum=-2.473;DP=673;FS=4.011;HRun=14;HaplotypeScore=108.9027;InbreedingCoeff=-0.1061;MQ=69.18;MQ0=19;MQRankSum=-1.417;QD=7.70;ReadPosRankSum=1.990;VQSLOD=4.1757;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:39:85.93:0,86,447	1/1:2,6:10:21.91:135,22,0	0/1:73,0:30:12.07:12,0,116	0/1:71,0:29:11.19:11,0,43	0/1:6,14:23:7.99:213,0,8	1/1:1,15:15:44.53:303,45,0	1/1:3,10:13:14.06:186,14,0	1/1:19,9:27:7.91:198,8,0	1/1:2,18:20:56.39:383,56,0	0/1:8,19:28:22.74:285,0,23	1/1:4,18:22:10.78:217,11,0	0/1:5,10:16:22.86:112,0,23	1/1:8,6:14:24.44:173,24,0	0/1:5,9:13:0.96:136,0,1	1/1:14,12:26:4.30:294,4,0	1/1:6,11:17:22.18:212,22,0	1/1:10,19:32:56.35:343,56,0	0/1:9,11:21:68.22:167,0,68	0/1:19,2:24:6.37:6,0,217	1/1:6,10:18:15.74:192,16,0	1/1:5,4:9:11.88:82,12,0	1/1:5,7:14:12.59:141,13,0	0/1:11,11:24:19.40:165,0,19	1/1:3,9:13:3.46:158,3,0	0/1:9,16:26:44.57:201,0,45	0/1:11,16:29:42.73:285,0,43	1/1:11,4:15:25.41:158,25,0	0/1:2,6:8:7.01:102,0,7
chr10	10590255	.	GT	G	1177.55	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.884;DP=631;FS=10.684;HRun=8;HaplotypeScore=108.5158;InbreedingCoeff=0.9078;MQ=57.82;MQ0=19;MQRankSum=-10.070;QD=21.81;ReadPosRankSum=-0.149;VQSLOD=2.5651;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:37:99:0,105,1246	0/0:8,0:8:21.06:0,21,254	0/0:50,0:14:16.52:0,17,163	0/0:48,0:14:8.82:0,9,129	0/0:25,0:25:69.07:0,69,798	1/1:2,17:18:51.08:490,51,0	1/1:3,10:13:24.97:281,25,0	0/0:27,0:25:56.93:0,57,676	1/1:3,19:22:57.09:549,57,0	0/0:28,0:28:78.23:0,78,931	0/0:20,0:20:34.77:0,35,594	0/0:16,0:16:12.12:0,12,309	0/0:14,0:14:17.79:0,18,302	0/0:15,0:13:26.99:0,27,294	0/0:37,0:37:89.61:0,90,1066	0/0:14,1:15:6.22:0,6,323	0/0:30,0:30:53.94:0,54,871	0/0:26,0:26:59.62:0,60,666	0/0:24,0:21:54.15:0,54,629	0/0:17,0:17:41.54:0,42,474	0/0:4,0:4:9.03:0,9,109	0/0:13,0:13:33.09:0,33,388	0/0:19,0:19:37.97:0,38,498	0/0:16,0:16:38.81:0,39,436	0/0:28,0:28:66.12:0,66,778	0/0:30,0:30:78.24:0,78,938	0/0:11,0:11:29.41:0,29,308	0/0:13,0:13:39.12:0,39,471
chr10	10590278	.	G	GT	1132.75	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=6.102;DP=540;FS=4.109;HRun=7;HaplotypeScore=83.7101;InbreedingCoeff=0.9242;MQ=70.31;MQ0=5;MQRankSum=-6.594;QD=25.74;ReadPosRankSum=0.744;VQSLOD=4.2844;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:96.08:0,96,909	0/0:8,0:8:18.02:0,18,174	0/0:25,0:18:29.05:0,29,393	0/0:19,0:7:11.75:0,12,98	0/0:23,0:23:57.09:0,57,550	1/1:3,10:13:30.09:358,30,0	1/1:3,10:14:29.96:341,30,0	0/0:23,0:22:36.04:0,36,347	1/1:0,17:17:48.15:576,48,0	0/0:28,0:28:66.03:0,66,620	0/0:19,0:19:42.05:0,42,405	0/0:10,0:10:24.02:0,24,227	0/0:14,0:14:21.01:0,21,203	0/0:18,0:17:29.99:0,30,276	0/0:36,0:36:87.07:0,87,834	0/0:13,0:13:30.04:0,30,290	0/0:36,0:36:78.04:0,78,744	0/0:26,0:26:63.05:0,63,598	0/0:20,0:20:36.02:0,36,340	0/0:16,0:16:39.06:0,39,376	0/0:2,0:2:3:0,3,29	0/0:12,0:12:33.05:0,33,319	0/0:16,0:16:36.05:0,36,347	0/0:12,0:12:30.04:0,30,287	0/0:24,0:24:51.07:0,51,492	0/0:31,0:31:84.13:0,84,811	0/0:15,0:15:39.06:0,39,376	0/0:13,0:13:36.05:0,36,348
chr10	10591242	.	T	TACACACACAC	7472.19	PASS	AC=42;AF=0.808;AN=52;BaseQRankSum=-2.742;DP=622;FS=2.208;HRun=0;HaplotypeScore=161.0732;InbreedingCoeff=0.4922;MQ=49.96;MQ0=16;MQRankSum=-2.145;QD=16.00;ReadPosRankSum=-0.978;VQSLOD=4.0688;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:25:3.01:91,3,0	1/1:3,0:10:3.48:129,3,0	0/0:23,0:14:24.08:0,24,651	0/0:27,0:15:24.08:0,24,565	./.	1/1:10,0:26:0.89:2,1,0	1/1:14,0:32:2.44:6,2,0	1/1:36,0:35:60.03:1483,60,0	1/1:11,0:25:3.01:143,3,0	1/1:8,0:31:38.51:920,39,0	1/1:14,0:13:5.76:125,6,0	0/0:8,0:25:2.36:0,2,13	1/1:5,0:15:4.57:137,5,0	1/1:6,11:21:3.01:85,3,0	1/1:10,0:27:2.75:12,3,0	1/1:23,0:25:20.95:540,21,0	1/1:10,0:20:3.48:93,3,0	1/1:2,0:7:9.03:295,9,0	1/1:26,0:26:45.84:979,46,0	1/1:25,0:25:14.31:448,14,0	1/1:16,0:14:5.86:77,6,0	./.	0/0:16,0:15:0.47:0,0,1	0/0:5,0:19:0.47:0,0,1	1/1:8,0:21:2.04:6,2,0	1/1:13,0:34:48.07:1245,48,0	1/1:16,0:16:20.61:325,21,0	1/1:8,0:7:11.86:331,12,0
chr10	10591255	.	ACTCTCT	A	514.17	PASS	AB=0.981;AC=18;AF=0.474;AN=38;BaseQRankSum=-2.077;DP=575;FS=3.996;HRun=0;HaplotypeScore=121.4213;InbreedingCoeff=-0.0506;MQ=43.52;MQ0=32;MQRankSum=1.435;QD=2.02;ReadPosRankSum=-1.449;VQSLOD=2.1363;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:23,1:23:2.30:43,2,0	0/0:9,0:9:2.99:0,3,23	./.	./.	./.	0/0:29,0:24:3.99:0,4,15	0/1:22,0:22:23.86:109,0,24	./.	0/1:24,0:23:0.96:1,0,21	0/0:34,0:33:32.72:0,33,297	./.	0/1:25,0:25:6.55:7,0,30	0/1:17,0:16:24.85:88,0,25	0/0:25,0:22:4.96:0,5,46	1/1:23,0:23:5.13:63,5,0	0/1:20,1:22:29.20:29,0,125	1/1:17,0:17:3.01:51,3,0	0/1:6,0:6:13.82:40,0,14	1/1:24,1:26:6.02:109,6,0	0/0:16,2:20:0:0,0,1	./.	./.	./.	./.	0/1:21,0:21:7.41:7,0,31	0/0:33,0:29:19.97:0,20,137	0/1:13,1:14:11.07:11,0,25	1/1:9,0:10:0.57:77,1,0
chr10	10595721	.	A	AGCGCGC	286.97	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=0.510;DP=556;FS=0.000;HRun=0;HaplotypeScore=180.5030;InbreedingCoeff=0.5654;MQ=66.73;MQ0=10;MQRankSum=0.019;QD=5.41;ReadPosRankSum=0.343;VQSLOD=2.3778;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:51.13:0,51,833	0/0:12,0:11:21.07:0,21,405	0/0:29,0:20:25.94:0,26,462	0/0:18,0:15:30.01:0,30,517	0/0:18,0:18:21:0,21,433	1/1:19,0:19:3.01:70,3,0	1/1:7,18:25:3.33:55,3,0	0/0:20,0:18:30.10:0,30,669	0/1:8,0:8:35.25:268,0,35	0/0:28,0:27:59.95:0,60,1039	0/0:12,0:12:21.54:0,22,434	0/0:17,0:17:33.10:0,33,632	0/0:18,0:18:45.11:0,45,784	0/0:26,0:26:63.20:0,63,1216	0/0:19,0:19:42.14:0,42,746	0/0:16,0:16:42.14:0,42,772	0/0:22,0:22:24.03:0,24,505	0/0:26,0:26:56.21:0,56,1045	0/0:13,0:13:33.05:0,33,608	0/0:12,0:11:27.09:0,27,535	0/0:36,0:36:38.56:0,39,736	0/0:19,0:19:36.11:0,36,617	0/0:14,0:14:9.03:0,9,185	0/0:36,0:35:51.16:0,51,961	0/0:20,0:20:41.99:0,42,770	0/0:17,0:17:36.10:0,36,628	0/0:16,0:16:36.10:0,36,575	0/0:11,0:11:33.11:0,33,682
chr10	10595728	.	GCACACACACA	G	8946.05	PASS	AB=0.933;AC=47;AF=0.839;AN=56;BaseQRankSum=1.583;DP=553;FS=0.000;HRun=0;HaplotypeScore=167.9183;InbreedingCoeff=0.4553;MQ=58.25;MQ0=13;MQRankSum=-2.902;QD=19.45;ReadPosRankSum=3.460;VQSLOD=3.8587;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:32:24.08:559,24,0	1/1:8,1:8:3:90,3,0	0/0:22,0:13:3.01:0,3,100	0/0:16,0:12:3.01:0,3,74	1/1:9,8:18:2.46:69,2,0	0/0:8,0:25:3.48:0,3,121	0/0:30,0:29:15.52:0,16,679	1/1:17,0:14:2.99:25,3,0	0/1:13,1:14:80.95:81,0,120	1/1:13,10:23:39.10:986,39,0	1/1:6,1:8:12.03:206,12,0	1/1:7,6:15:14.03:408,14,0	1/1:9,9:21:24.55:640,25,0	1/1:14,11:26:27.56:791,28,0	1/1:8,10:19:27.09:772,27,0	1/1:5,9:15:26.73:771,27,0	1/1:15,7:22:2.38:89,2,0	1/1:19,6:25:9.99:356,10,0	1/1:10,5:15:11.61:270,12,0	1/1:8,1:10:7.27:126,7,0	1/1:27,3:39:3:91,3,0	1/1:6,11:17:19.26:454,19,0	1/1:4,5:9:2.92:72,3,0	1/1:24,12:36:12.04:360,12,0	1/1:11,10:22:11.80:340,12,0	1/1:7,6:14:18.06:457,18,0	1/1:6,10:17:26.79:680,27,0	1/1:9,3:12:10.85:255,11,0
chr10	10599866	.	GCT	G	827.76	PASS	AB=0.991;AC=10;AF=0.185;AN=54;BaseQRankSum=1.822;DP=445;FS=0.000;HRun=0;HaplotypeScore=71.4813;InbreedingCoeff=0.5018;MQ=70.48;MQ0=12;MQRankSum=1.984;QD=7.26;ReadPosRankSum=-1.696;VQSLOD=2.7342;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:15:18.02:196,18,0	0/0:7,0:7:14.91:0,15,214	0/1:25,1:18:18.59:19,0,87	0/0:24,0:13:17.68:0,18,181	0/1:11,0:11:9.33:9,0,330	0/0:23,0:23:51.11:0,51,720	0/0:22,0:21:44.72:0,45,540	1/1:7,15:20:42.07:480,42,0	0/0:11,0:11:21.06:0,21,312	0/0:18,0:18:39.08:0,39,570	0/0:7,0:7:18.04:0,18,239	0/0:14,0:14:21.54:0,22,308	0/0:16,0:15:20.84:0,21,295	0/0:15,0:15:23.78:0,24,307	0/0:12,0:12:20.81:0,21,295	0/0:12,0:12:24.08:0,24,373	0/0:9,0:9:18.06:0,18,269	0/0:17,0:17:42.14:0,42,641	0/1:17,0:13:79.98:123,0,80	1/1:3,8:10:17.89:137,18,0	./.	0/0:19,0:19:33.02:0,33,511	0/1:10,0:9:22.74:23,0,150	0/0:11,0:11:18.06:0,18,284	0/0:14,0:14:36.10:0,36,516	0/0:23,0:23:54.14:0,54,760	0/0:15,0:15:18.06:0,18,279	0/0:28,0:27:57.14:0,57,776
chr10	10599883	.	TTC	T	80.33	PASS	AC=8;AF=0.154;AN=52;BaseQRankSum=-0.269;DP=444;FS=1.228;HRun=0;HaplotypeScore=85.0503;InbreedingCoeff=0.4504;MQ=51.26;MQ0=26;MQRankSum=0.269;QD=1.13;ReadPosRankSum=-0.833;VQSLOD=1.3774;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:13:2.80:0,3,13	0/0:9,0:9:5.72:0,6,43	./.	./.	0/0:17,0:17:8.82:0,9,67	1/1:21,3:24:14.03:87,14,0	1/1:15,5:17:8.81:79,9,0	0/0:29,0:26:3.79:0,4,18	1/1:12,1:13:5.57:31,6,0	0/0:19,0:18:12.56:0,13,146	0/0:9,0:9:3.01:0,3,37	0/0:12,0:12:5.33:0,5,16	0/0:13,0:12:4.51:0,5,40	0/0:13,0:13:8.89:0,9,61	0/0:10,0:12:2.74:0,3,12	0/0:14,0:14:7.49:0,7,36	0/0:12,0:9:3.01:0,3,38	0/0:18,0:19:29.06:0,29,260	0/0:16,0:11:10.38:0,10,104	0/0:13,0:11:0.47:0,0,1	1/1:14,0:11:0.47:1,0,0	0/0:22,0:22:2.88:0,3,21	0/0:13,0:10:2.27:0,2,23	0/0:11,0:11:1.75:0,2,5	0/0:19,0:19:9.49:0,9,110	0/0:23,0:22:25.73:0,26,309	0/0:10,0:10:12.40:0,12,105	0/0:21,0:18:12.03:0,12,138
chr10	10601047	.	GT	G	567.42	PASS	AB=0.996;AC=6;AF=0.107;AN=56;BaseQRankSum=6.886;DP=584;FS=7.222;HRun=10;HaplotypeScore=76.7697;InbreedingCoeff=0.2039;MQ=59.60;MQ0=14;MQRankSum=-0.044;QD=3.86;ReadPosRankSum=0.290;VQSLOD=0.2740;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,28:30:69.68:637,70,0	0/0:7,0:7:18.05:0,18,199	0/1:55,1:21:28.35:28,0,265	0/0:56,0:20:1.46:0,1,169	0/0:24,0:24:60.16:0,60,662	0/1:24,0:25:3.95:4,0,243	0/0:15,0:15:18.12:0,18,195	0/1:19,0:19:2.51:3,0,45	0/0:8,0:10:11.02:0,11,62	0/0:25,0:25:60.15:0,60,654	0/0:17,0:17:48.12:0,48,524	0/0:10,0:10:30.07:0,30,322	0/0:16,1:17:25.04:0,25,491	0/0:17,0:17:35.93:0,36,379	0/0:16,0:16:28.97:0,29,395	0/0:15,0:15:36.07:0,36,386	0/0:24,0:24:56.62:0,57,594	0/0:19,0:20:53.98:0,54,577	0/0:22,0:22:0.23:0,0,46	0/1:12,0:14:11.29:11,0,16	0/0:8,0:9:5.11:0,5,17	0/0:10,0:10:24.06:0,24,265	0/0:20,0:22:50.97:0,51,542	0/0:23,0:23:57.15:0,57,630	0/0:10,1:11:4.02:0,4,272	0/0:19,0:19:48.13:0,48,530	0/0:33,2:35:47.11:0,47,946	0/0:9,0:9:26.97:0,27,282
chr10	10601057	.	TG	T	1453.52	PASS	AB=0.972;AC=14;AF=0.250;AN=56;BaseQRankSum=12.191;DP=570;FS=0.934;HRun=1;HaplotypeScore=75.2212;InbreedingCoeff=0.7795;MQ=58.74;MQ0=13;MQRankSum=-1.689;QD=9.96;ReadPosRankSum=-2.860;VQSLOD=0.2647;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:34,0:33:40.24:93,0,40	0/0:8,0:8:24.02:0,24,277	0/0:55,0:21:1.94:0,2,235	0/0:49,2:18:31.80:0,32,246	0/0:23,0:23:69.18:0,69,841	1/1:23,3:26:12.56:152,13,0	0/1:16,1:17:8.69:37,0,9	1/1:10,4:13:29.72:237,30,0	1/1:11,0:11:21.59:161,22,0	0/0:21,0:21:63.15:0,63,769	0/0:15,0:15:45.15:0,45,576	0/0:11,0:11:32.88:0,33,380	0/0:19,0:19:52.82:0,53,620	0/0:16,0:15:44.88:0,45,490	0/0:16,1:17:25.43:0,25,525	0/0:17,0:17:42.04:0,42,493	0/0:20,0:19:49.48:0,49,632	0/0:21,0:21:59.99:0,60,677	1/1:2,7:19:53.98:448,54,0	1/1:7,7:14:40.54:364,41,0	1/1:7,3:10:20.81:151,21,0	0/0:10,0:10:27.02:0,27,300	0/0:20,0:20:54.03:0,54,639	0/0:26,0:26:75.14:0,75,874	0/0:14,0:14:38.41:0,38,432	0/0:18,0:18:53.95:0,54,644	0/0:33,0:33:74.95:0,75,1032	0/0:9,0:9:18.01:0,18,300
chr10	10601060	.	TTG	T	1667.01	PASS	AB=0.941;AC=13;AF=0.232;AN=56;BaseQRankSum=11.327;DP=575;FS=0.460;HRun=0;HaplotypeScore=84.6704;InbreedingCoeff=0.8980;MQ=59.69;MQ0=13;MQRankSum=-1.111;QD=14.62;ReadPosRankSum=-2.909;VQSLOD=2.8525;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:35:93.30:0,93,1595	0/0:9,0:9:27.09:0,27,488	0/0:53,0:21:41.18:0,41,660	0/0:50,0:19:45.09:0,45,540	0/0:25,0:25:72.23:0,72,1311	1/1:26,0:26:24.27:256,24,0	0/1:15,1:16:20.63:148,0,21	1/1:14,3:16:27.66:240,28,0	1/1:8,1:9:21.60:241,22,0	0/0:22,0:22:66.22:0,66,1170	0/0:15,0:15:45.15:0,45,853	0/0:12,0:12:36.12:0,36,652	0/0:20,0:20:60.21:0,60,1117	0/0:16,0:15:45.15:0,45,832	0/0:19,0:19:56.40:0,56,995	0/0:18,0:18:51.16:0,51,890	0/0:19,0:18:54.14:0,54,912	0/0:20,0:20:54.11:0,54,946	1/1:16,4:19:53.04:439,53,0	1/1:12,3:15:38.90:353,39,0	1/1:10,1:11:23.66:181,24,0	0/0:9,0:9:24.08:0,24,453	0/0:19,0:19:54.19:0,54,1023	0/0:26,0:26:75.26:0,75,1415	0/0:15,0:15:45.15:0,45,814	0/0:18,0:18:51.17:0,51,965	0/0:32,0:32:96.32:0,96,1736	0/0:8,0:8:24.08:0,24,455
chr10	10601062	.	G	GTT	1291.15	PASS	AB=0.857;AC=11;AF=0.196;AN=56;BaseQRankSum=7.746;DP=572;FS=5.808;HRun=3;HaplotypeScore=84.5359;InbreedingCoeff=0.6759;MQ=60.16;MQ0=12;MQRankSum=1.186;QD=11.63;ReadPosRankSum=-2.151;VQSLOD=-0.3281;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:34:93.24:0,93,1245	0/0:9,0:9:27.09:0,27,376	0/0:50,0:20:15.83:0,16,510	0/0:48,0:18:39.65:0,40,458	0/0:25,0:25:75.19:0,75,977	1/1:1,24:25:39.13:703,39,0	0/1:4,12:16:15.33:292,0,15	1/1:16,0:15:1.93:71,2,0	1/1:7,1:8:20.04:226,20,0	0/0:21,0:21:57.19:0,57,796	0/0:16,0:16:45.13:0,45,611	0/0:13,0:13:36.12:0,36,497	0/0:20,0:20:60.20:0,60,830	0/0:18,0:17:45.15:0,45,622	0/0:20,0:20:57.10:0,57,767	0/0:18,0:18:51.16:0,51,683	0/0:20,0:19:42.14:0,42,580	0/0:19,0:19:45.15:0,45,626	0/1:20,0:19:7:38,0,7	1/1:15,0:15:9.79:86,10,0	0/1:11,0:11:1.08:36,0,1	0/0:9,0:9:24.08:0,24,336	0/0:19,0:19:54.18:0,54,754	0/0:26,0:26:75.25:0,75,1037	0/0:16,0:16:42.14:0,42,586	0/0:17,0:17:51.17:0,51,712	0/0:32,0:32:96.32:0,96,1318	0/0:8,0:8:24.08:0,24,334
chr10	10602094	.	G	GC	2969.84	PASS	AB=1.000;AC=49;AF=0.875;AN=56;BaseQRankSum=-1.421;DP=475;FS=5.254;HRun=0;HaplotypeScore=74.6159;InbreedingCoeff=0.5033;MQ=59.40;MQ0=54;MQRankSum=3.126;QD=8.51;ReadPosRankSum=4.445;VQSLOD=3.1222;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:17:34.54:255,35,0	0/1:9,0:9:2.33:59,0,2	0/0:48,0:12:24.37:0,24,200	0/0:53,0:14:16.03:0,16,145	1/1:15,0:14:20:144,20,0	1/1:6,0:5:5.24:35,5,0	1/1:12,0:10:11.98:133,12,0	1/1:23,0:19:31.53:276,32,0	1/1:11,0:10:19.81:136,20,0	1/1:18,0:13:7.94:80,8,0	1/1:11,1:13:15.02:110,15,0	1/1:7,0:6:5.45:36,5,0	1/1:13,0:13:16.17:130,16,0	1/1:14,0:13:4.18:66,4,0	1/1:12,0:11:26.38:209,26,0	1/1:10,0:9:23.32:161,23,0	1/1:27,1:24:17.09:205,17,0	1/1:5,9:11:3.89:29,4,0	1/1:23,0:18:32.25:316,32,0	1/1:9,0:4:9.88:77,10,0	1/1:8,0:4:2.37:24,2,0	1/1:4,0:4:5.46:49,5,0	1/1:8,0:8:5.94:74,6,0	1/1:8,0:6:8.52:70,9,0	1/1:21,0:19:11.52:111,12,0	1/1:19,6:22:15.52:141,16,0	1/1:18,0:17:20.93:173,21,0	0/0:10,12:19:0:0,0,0
chr10	10602197	.	A	AT	870.13	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-4.532;DP=385;FS=9.122;HRun=9;HaplotypeScore=47.6914;InbreedingCoeff=0.8280;MQ=71.22;MQ0=1;MQRankSum=2.611;QD=24.17;ReadPosRankSum=-0.830;VQSLOD=3.8068;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:65.95:0,66,569	0/0:6,0:6:15:0,15,130	0/0:18,0:14:1.48:0,1,174	0/0:13,0:9:15.60:0,16,129	1/1:1,20:21:54.14:593,54,0	0/0:10,0:10:29.99:0,30,259	0/0:15,0:15:32.94:0,33,278	0/0:18,0:17:38.98:0,39,336	0/0:10,0:10:20.97:0,21,182	0/0:13,0:13:38.99:0,39,339	0/0:18,0:19:47.02:0,47,397	0/0:5,0:5:14.98:0,15,127	0/0:6,0:6:11.92:0,12,104	0/0:7,0:7:17.96:0,18,156	0/0:9,0:9:11.99:0,12,104	0/0:8,0:8:24:0,24,208	0/0:19,0:19:53.99:0,54,469	0/0:19,0:19:53.99:0,54,469	0/0:13,0:13:26.90:0,27,219	0/0:24,0:24:16.87:0,17,312	0/0:7,0:6:14.99:0,15,130	0/0:6,0:6:14.99:0,15,130	0/0:9,0:9:23.99:0,24,208	0/0:11,0:11:23.99:0,24,208	1/1:0,15:15:36.10:398,36,0	0/0:21,0:22:44.02:0,44,371	0/0:17,0:17:44.94:0,45,383	0/0:17,0:17:26.67:0,27,234
chr10	10603094	.	TGAGAGA	T	137.54	PASS	AB=0.981;AC=7;AF=0.135;AN=52;BaseQRankSum=3.120;DP=666;FS=6.443;HRun=0;HaplotypeScore=169.8198;InbreedingCoeff=0.2571;MQ=38.15;MQ0=94;MQRankSum=-2.375;QD=1.05;ReadPosRankSum=-1.341;VQSLOD=2.1507;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:42,0:35:0.87:4,1,0	0/0:6,0:4:2.42:0,2,74	./.	./.	0/0:26,0:21:5.95:0,6,92	0/0:24,0:17:11.52:0,12,141	0/1:25,0:15:0.07:0,0,1	0/0:21,0:19:6.27:0,6,36	0/1:32,0:27:63.31:66,0,63	0/0:24,0:19:1.66:0,2,558	0/0:15,1:13:10.75:0,11,193	0/0:27,0:23:11:0,11,102	0/0:23,0:20:9.97:0,10,212	0/0:39,0:35:27.69:0,28,457	0/0:33,0:30:12.80:0,13,396	0/0:29,0:25:24.04:0,24,424	0/0:35,0:21:24.29:0,24,290	0/0:22,0:17:20.51:0,21,377	1/1:13,1:13:4.82:138,5,0	0/0:8,3:9:0.47:0,0,1	0/0:31,0:25:3.41:0,3,20	0/0:30,0:27:20.44:0,20,302	0/0:17,1:13:4.53:0,5,79	0/0:53,0:42:12.14:0,12,179	0/0:21,0:19:21.07:0,21,453	0/0:32,0:28:51.11:0,51,1056	0/1:16,1:12:32.70:33,0,216	0/0:10,0:5:6.48:0,6,171
chr10	10603130	.	AGG	A	205.81	PASS	AB=0.967;AC=15;AF=0.288;AN=52;BaseQRankSum=7.174;DP=672;FS=3.272;HRun=3;HaplotypeScore=119.3097;InbreedingCoeff=-0.3690;MQ=40.98;MQ0=98;MQRankSum=-0.867;QD=0.51;ReadPosRankSum=1.556;VQSLOD=-0.1286;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:40,0:32:16.43:26,0,16	0/0:5,0:4:6.01:0,6,74	./.	./.	0/0:25,0:21:7.07:0,7,154	0/1:21,2:15:7.63:45,0,8	0/1:25,1:18:4.82:5,0,26	0/0:32,0:29:19.09:0,19,340	0/1:11,17:24:11.30:60,0,11	0/0:25,0:18:15.04:0,15,318	0/0:16,0:12:0.29:0,0,116	0/1:24,0:19:28.45:28,0,82	0/1:21,0:17:8.01:8,0,202	0/0:35,0:31:12.88:0,13,302	0/0:31,0:28:25.08:0,25,363	0/1:29,0:25:16.25:16,0,230	0/1:31,0:20:3.36:3,0,223	0/0:23,0:19:5.82:0,6,238	0/0:25,0:21:5.23:0,5,216	0/0:10,0:8:2.39:0,2,10	0/0:40,1:34:8.09:0,8,65	0/1:22,0:17:42.05:42,0,49	0/1:16,0:12:24.55:25,0,82	0/1:52,0:41:24.46:24,0,166	0/1:22,0:20:0.60:1,0,278	0/1:33,0:29:2.19:2,0,516	0/1:21,0:16:46.34:46,0,141	0/1:16,0:9:7.78:8,0,58
chr10	10603144	.	AGT	A	294.09	PASS	AB=0.925;AC=15;AF=0.268;AN=56;BaseQRankSum=3.909;DP=766;FS=1.507;HRun=0;HaplotypeScore=110.8306;InbreedingCoeff=0.0084;MQ=43.98;MQ0=91;MQRankSum=2.966;QD=0.84;ReadPosRankSum=1.966;VQSLOD=2.2039;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:26,3:40:20.97:171,21,0	0/0:5,0:4:6.02:0,6,83	1/1:3,0:1:2.94:18,3,0	0/0:14,0:4:11.73:0,12,73	0/1:16,5:16:7.21:7,0,258	0/0:10,0:14:2.98:0,3,21	0/1:17,12:24:16.71:17,0,20	0/0:37,0:37:60.42:0,60,490	0/1:29,1:27:9.45:65,0,9	0/1:33,0:24:27.64:28,0,237	0/0:14,0:11:15.02:0,15,188	0/1:27,0:20:11.93:12,0,237	0/0:23,0:20:10.37:0,10,463	0/0:32,0:28:29.99:0,30,406	0/0:29,4:28:3.74:0,4,374	0/0:39,0:35:42.06:0,42,579	0/0:31,0:22:24.09:0,24,417	0/0:33,3:32:16.68:0,17,446	0/0:20,0:21:22.11:0,22,164	0/1:9,0:7:0:0,0,0	0/0:33,0:55:9.48:0,9,91	0/0:22,0:18:14.62:0,15,154	0/1:15,0:11:13.08:13,0,209	0/1:51,10:48:0.79:1,0,310	0/0:25,0:23:1.78:0,2,304	0/1:31,0:28:59.41:59,0,269	0/1:22,3:20:1.33:1,0,319	0/1:16,1:9:46.26:46,0,78
chr10	10603527	.	AGTGT	A	1461.97	PASS	AB=0.772;AC=33;AF=0.717;AN=46;BaseQRankSum=1.943;DP=510;FS=1.246;HRun=0;HaplotypeScore=89.0664;InbreedingCoeff=0.2416;MQ=72.47;MQ0=7;MQRankSum=1.360;QD=5.04;ReadPosRankSum=0.422;VQSLOD=2.0370;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	1/1:8,1:10:6.01:73,6,0	./.	./.	./.	1/1:16,0:19:3:28,3,0	0/0:8,0:14:0:0,0,0	0/0:19,0:19:4.69:0,5,25	1/1:8,0:13:9.01:84,9,0	./.	0/0:10,0:11:2.74:0,3,12	1/1:11,7:17:3.01:46,3,0	0/1:9,3:12:4.24:83,0,4	1/1:6,5:11:6.01:92,6,0	1/1:9,5:15:0.13:65,0,0	1/1:12,3:17:6.02:92,6,0	1/1:16,8:24:6.34:173,6,0	0/1:11,14:25:21.72:381,0,22	1/1:19,0:20:3:28,3,0	0/0:9,0:9:6:0,6,73	0/0:34,0:32:21.05:0,21,319	1/1:3,4:7:2.99:46,3,0	1/1:8,2:10:3.01:46,3,0	1/1:7,12:18:18.06:277,18,0	1/1:11,0:17:0.94:2,1,0	1/1:18,0:18:2.87:15,3,0	0/1:18,2:20:6.40:40,0,6	1/1:13,0:11:2.94:18,3,0
chr10	10603989	.	GC	G	7143.20	PASS	AB=0.583;AC=35;AF=0.625;AN=56;BaseQRankSum=8.282;DP=573;FS=27.741;HRun=10;HaplotypeScore=66.8233;InbreedingCoeff=0.9173;MQ=81.63;MQ0=0;MQRankSum=-2.955;QD=21.07;ReadPosRankSum=7.111;VQSLOD=3.4889;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:25:18.95:0,19,413	1/1:0,3:3:9:78,9,0	0/0:26,0:26:32.70:0,33,367	0/0:20,2:22:32.68:0,33,318	1/1:1,7:8:17.98:156,18,0	0/0:12,1:13:13:0,13,340	0/0:27,1:29:54.92:0,55,772	0/0:14,0:14:20.99:0,21,207	0/0:16,1:17:16.05:0,16,397	1/1:4,9:13:26.96:234,27,0	1/1:0,6:6:18:156,18,0	1/1:7,34:41:95.94:833,96,0	0/1:4,10:14:3.19:204,0,3	1/1:2,24:26:68.98:599,69,0	1/1:1,24:25:65.99:573,66,0	1/1:2,21:23:56.98:495,57,0	1/1:1,22:23:62.99:547,63,0	1/1:1,20:21:56.99:495,57,0	0/0:13,0:14:38.90:0,39,392	0/0:20,0:20:44.65:0,45,446	0/0:52,1:54:99:0,103,1285	1/1:0,18:18:53.99:469,54,0	1/1:2,17:19:16.51:359,17,0	1/1:6,31:37:74.98:651,75,0	1/1:1,15:16:41.99:364,42,0	1/1:2,21:23:56.97:494,57,0	1/1:1,15:16:8.81:305,9,0	1/1:1,6:7:15:130,15,0
chr10	10605083	.	T	TA	2264.67	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-9.436;DP=722;FS=0.920;HRun=9;HaplotypeScore=71.7607;InbreedingCoeff=0.9935;MQ=73.73;MQ0=0;MQRankSum=0.684;QD=21.57;ReadPosRankSum=-3.165;VQSLOD=3.0401;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:47:99:0,122,1042	0/0:12,0:12:32.98:0,33,284	0/0:19,0:19:38.62:0,39,310	0/0:17,0:17:29.95:0,30,255	0/0:25,0:25:68.97:0,69,595	0/0:21,0:21:59.97:0,60,517	0/0:28,0:28:62.94:0,63,543	1/1:9,18:27:57.01:603,57,0	0/0:27,0:27:71.98:0,72,625	0/0:31,0:31:80.97:0,81,703	0/0:18,0:18:38.98:0,39,338	0/0:38,0:38:99:0,105,905	0/0:21,0:21:59.98:0,60,521	0/0:26,0:26:46.60:0,47,528	0/0:38,0:38:95.93:0,96,824	0/0:24,0:24:68.98:0,69,599	0/0:24,0:25:65.02:0,65,553	0/0:19,0:19:50.97:0,51,438	1/1:6,10:16:33.04:343,33,0	1/1:3,22:25:13.99:581,14,0	1/1:8,29:37:81.22:896,81,0	0/0:16,0:16:41.97:0,42,360	0/0:25,0:25:74.99:0,75,651	0/0:35,0:35:89.97:0,90,781	0/0:22,0:22:62.98:0,63,547	0/0:35,0:35:92.92:0,93,795	0/0:39,1:40:65.76:0,66,796	0/0:8,0:8:23.96:0,24,201
chr10	10605658	.	A	ATGAC	4836.29	PASS	AB=1.000;AC=21;AF=0.389;AN=54;BaseQRankSum=-8.707;DP=841;FS=3.849;HRun=0;HaplotypeScore=146.2333;InbreedingCoeff=0.9257;MQ=65.04;MQ0=10;MQRankSum=0.935;QD=13.86;ReadPosRankSum=-2.806;VQSLOD=4.3098;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:42:15.01:0,15,138	0/0:14,0:14:21.06:0,21,302	./.	0/1:36,0:29:0:1,0,0	1/1:18,17:36:30.10:701,30,0	1/1:16,14:30:30.10:701,30,0	1/1:15,7:22:15.05:351,15,0	1/1:27,0:27:8.99:103,9,0	1/1:9,20:29:30.10:701,30,0	0/0:38,0:38:45.15:0,45,688	0/0:20,0:20:18.02:0,18,251	0/0:31,0:31:36.10:0,36,528	0/0:48,0:48:90.25:0,90,1316	0/0:32,0:32:51.16:0,51,762	0/0:38,0:38:57.17:0,57,834	0/0:34,0:34:57.14:0,57,792	0/0:18,0:18:27.09:0,27,415	0/0:16,0:16:21.07:0,21,319	1/1:24,0:23:3.01:52,3,0	1/1:19,0:26:15.05:236,15,0	1/1:54,0:54:18.43:196,18,0	0/0:24,0:24:21.07:0,21,323	0/0:27,0:27:27.09:0,27,403	0/0:33,0:33:63.21:0,63,969	1/1:10,15:27:33.11:772,33,0	1/1:19,16:36:51.12:1023,51,0	0/0:19,0:38:41.87:0,42,380	0/0:20,0:19:39.13:0,39,595
chr10	10607719	.	CATGT	C	10927	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-3.170;DP=810;FS=12.647;HRun=0;HaplotypeScore=154.4446;InbreedingCoeff=0.9326;MQ=65.55;MQ0=10;MQRankSum=6.309;QD=20.12;ReadPosRankSum=6.332;VQSLOD=3.5194;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:16,27:43:47.74:775,48,0	1/1:1,9:10:17.84:232,18,0	0/0:30,0:25:30.09:0,30,522	0/0:25,0:15:15:0,15,183	1/1:7,0:29:5.74:21,6,0	0/0:7,0:23:9.03:0,9,155	0/0:40,0:37:33.95:0,34,435	0/0:35,0:34:34.44:0,34,323	0/0:9,0:37:27.07:0,27,422	1/1:9,34:42:99:1528,105,0	1/1:3,23:26:60.41:823,60,0	1/1:4,29:33:60.20:969,60,0	1/1:9,23:32:42.14:678,42,0	1/1:10,16:26:24.08:388,24,0	1/1:9,27:36:54.18:872,54,0	1/1:7,21:28:45.15:727,45,0	1/1:13,18:31:15.05:242,15,0	1/1:8,22:30:33.11:522,33,0	0/0:19,0:18:27.45:0,27,313	0/0:35,0:35:8.40:0,8,125	0/0:23,0:23:21.01:0,21,291	1/1:7,26:33:50.87:736,51,0	1/1:11,18:29:20.99:339,21,0	1/1:2,16:18:24.08:387,24,0	1/1:4,0:23:7.02:37,7,0	1/1:5,21:26:63.15:889,63,0	1/1:11,25:36:38.92:617,39,0	1/1:2,8:10:9.03:145,9,0
chr10	10615700	.	C	CT	1812.32	PASS	AB=0.786;AC=33;AF=0.589;AN=56;BaseQRankSum=-4.140;DP=562;FS=0.501;HRun=16;HaplotypeScore=104.7128;InbreedingCoeff=0.0149;MQ=75.56;MQ0=6;MQRankSum=1.277;QD=4.14;ReadPosRankSum=-1.250;VQSLOD=1.1276;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:33:14.64:0,15,213	0/1:3,4:8:10.67:37,0,11	0/1:37,0:11:12.64:13,0,19	0/1:45,0:27:23.05:39,0,23	0/1:21,1:22:30.23:30,0,49	1/1:2,5:7:5.99:48,6,0	0/1:10,0:12:6.70:22,0,7	0/0:16,0:35:34.44:0,34,96	1/1:2,3:5:2.99:24,3,0	0/1:7,9:16:6.59:136,0,7	1/1:10,13:26:13.15:231,13,0	1/1:17,0:17:12.37:121,12,0	1/1:8,1:11:19.07:129,19,0	1/1:18,0:18:5.94:92,6,0	0/1:13,1:14:51.83:73,0,52	1/1:13,2:16:23.83:178,24,0	0/1:11,23:35:16.27:116,0,16	0/1:11,9:20:30.18:30,0,42	0/0:7,0:24:29.97:0,30,82	0/0:7,0:18:17.38:0,17,48	0/0:2,0:13:13.98:0,14,39	1/1:7,9:18:23.42:152,23,0	0/1:10,9:19:33.27:87,0,33	1/1:6,2:9:2.22:42,2,0	0/1:13,9:22:29.75:54,0,30	1/1:15,6:23:9.03:213,9,0	0/1:12,15:27:3.86:80,0,4	0/1:7,3:10:5.99:41,0,6
chr10	10617563	.	T	TTAAA	5291.49	PASS	AC=46;AF=0.885;AN=52;BaseQRankSum=-0.824;DP=322;FS=3.348;HRun=0;HaplotypeScore=65.5386;InbreedingCoeff=0.4569;MQ=55.05;MQ0=4;MQRankSum=-0.658;QD=19.82;ReadPosRankSum=-0.714;VQSLOD=3.9158;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,0:11:12.03:166,12,0	1/1:0,2:2:6.02:142,6,0	0/0:14,0:9:3.01:0,3,39	./.	0/0:8,0:8:6.02:0,6,93	1/1:10,0:16:15.05:257,15,0	./.	1/1:37,0:37:24:351,24,0	1/1:7,0:9:18.06:282,18,0	1/1:8,3:11:12.03:203,12,0	1/1:7,2:9:6.02:140,6,0	1/1:3,2:5:3.01:71,3,0	1/1:9,3:12:9.03:200,9,0	1/1:6,5:11:12.04:284,12,0	1/1:4,1:5:3.01:71,3,0	1/1:5,2:7:6.02:142,6,0	1/1:10,12:23:33.11:781,33,0	1/1:12,8:20:21.07:497,21,0	1/1:10,1:8:3.01:71,3,0	1/1:10,0:10:3.01:71,3,0	1/1:2,1:4:3.01:71,3,0	1/1:4,1:5:3.01:71,3,0	1/1:6,3:9:9.03:213,9,0	1/1:5,3:9:6.02:142,6,0	0/0:14,0:14:15.05:0,15,235	1/1:8,4:12:12.04:284,12,0	1/1:11,4:15:9.03:212,9,0	1/1:4,9:13:24.08:568,24,0
chr10	10620545	.	CAG	C	1760.25	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-0.236;DP=786;FS=3.690;HRun=0;HaplotypeScore=118.8637;InbreedingCoeff=0.9994;MQ=81.43;MQ0=1;MQRankSum=-3.656;QD=37.45;ReadPosRankSum=0.564;VQSLOD=5.5138;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,45:46:99:1855,126,0	0/0:10,0:10:30.09:0,30,531	0/0:26,0:26:75.23:0,75,1317	0/0:16,0:16:42.08:0,42,655	0/0:28,0:28:78.27:0,78,1461	0/0:23,0:23:66.23:0,66,1229	0/0:33,0:33:96.33:0,96,1764	0/0:26,0:26:66.23:0,66,1225	0/0:24,0:24:66.23:0,66,1216	0/0:24,0:24:72.25:0,72,1311	0/0:14,0:14:42.13:0,42,755	0/0:32,0:32:93.32:0,93,1718	0/0:27,0:27:75.26:0,75,1375	0/0:33,0:33:93.32:0,93,1726	0/0:39,0:39:99:0,114,2127	0/0:31,0:31:93.31:0,93,1711	0/0:38,0:38:99:0,111,2071	0/0:21,0:21:60.16:0,60,1087	0/0:27,0:27:75.25:0,75,1352	0/0:26,0:26:72.22:0,72,1303	0/0:57,0:57:99:0,172,3122	0/0:24,0:24:66.23:0,66,1228	0/0:15,0:15:45.15:0,45,843	0/0:36,0:36:99:0,102,1910	0/0:25,0:25:75.26:0,75,1405	0/0:29,0:29:81.28:0,81,1510	0/0:36,0:35:99:0,108,1947	0/0:19,0:19:57.13:0,57,998
chr10	10623281	.	GGGAGGAGA	G	2681.04	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.618;DP=769;FS=2.134;HRun=0;HaplotypeScore=193.5470;InbreedingCoeff=0.9999;MQ=78.49;MQ0=0;MQRankSum=-9.018;QD=52.57;ReadPosRankSum=3.273;VQSLOD=3.4380;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:97.58:0,98,3953	0/0:16,0:16:39.13:0,39,1659	0/0:37,0:31:57.01:0,57,2119	0/0:44,0:41:60.19:0,60,2545	1/1:7,25:32:60.21:1601,60,0	0/0:24,0:23:52.29:0,52,2260	0/0:23,0:23:63.18:0,63,2501	0/0:35,0:35:87.30:0,87,3478	0/0:34,0:34:84.29:0,84,3472	0/0:28,0:28:81.27:0,81,3235	0/0:26,0:26:69.24:0,69,2832	0/0:37,0:37:84.29:0,84,3336	0/0:27,0:27:81.28:0,81,3356	0/0:26,0:26:66.23:0,66,2818	0/0:33,0:33:78.27:0,78,3205	0/0:29,0:29:84.29:0,84,3475	0/0:25,0:25:60.21:0,60,2521	0/0:27,0:27:69.24:0,69,2792	0/0:15,0:15:36.11:0,36,1330	0/0:30,0:30:78.27:0,78,3276	0/0:21,0:21:57.20:0,57,2367	0/0:18,0:18:51.18:0,51,1948	0/0:21,0:21:60.19:0,60,2457	0/0:21,0:21:63.22:0,63,2672	1/1:4,15:19:45.15:1201,45,0	0/0:30,0:30:75.25:0,75,3097	0/0:38,0:38:96.33:0,96,3858	0/0:14,0:14:42.14:0,42,1729
chr10	10626660	.	AGATAG	A	21440.42	PASS	AB=0.519;AC=35;AF=0.625;AN=56;BaseQRankSum=16.349;DP=702;FS=7.217;HRun=0;HaplotypeScore=151.7914;InbreedingCoeff=0.9219;MQ=85.20;MQ0=0;MQRankSum=-6.456;QD=50.93;ReadPosRankSum=8.075;VQSLOD=4.3749;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,117,3491	1/1:0,6:6:18.06:382,18,0	0/0:27,0:27:75.25:0,75,2132	0/0:24,0:24:66.22:0,66,1857	1/1:2,23:25:39.13:830,39,0	0/0:19,0:19:54.19:0,54,1622	0/0:29,0:29:84.27:0,84,2561	0/0:30,0:30:87.29:0,87,2592	0/0:29,0:29:84.29:0,84,2588	1/1:2,14:16:42.14:895,42,0	1/1:1,12:13:36.12:742,36,0	1/1:3,31:34:90.31:1904,90,0	1/1:2,39:41:99:2280,108,0	1/1:2,28:30:78.27:1654,78,0	1/1:2,29:31:75.26:1590,75,0	0/1:2,26:28:15.74:1520,0,16	1/1:0,35:35:90.31:1919,90,0	1/1:3,25:28:59.66:1278,60,0	0/0:16,0:16:45.15:0,45,1341	0/0:21,0:21:63.22:0,63,1919	0/0:43,0:43:99:0,123,3804	1/1:2,21:24:54.19:1126,54,0	1/1:4,9:13:24.08:501,24,0	1/1:2,24:26:47.76:1023,48,0	1/1:2,10:12:30.10:639,30,0	1/1:6,23:29:69.22:1430,69,0	1/1:2,23:25:66.23:1407,66,0	1/1:0,5:5:15.05:320,15,0
chr10	10628734	.	A	AC	41.10	PASS	AB=0.919;AC=10;AF=0.179;AN=56;BaseQRankSum=2.373;DP=469;FS=14.644;HRun=0;HaplotypeScore=68.3315;InbreedingCoeff=-0.0417;MQ=65.17;MQ0=21;MQRankSum=-2.897;QD=0.40;ReadPosRankSum=-2.679;VQSLOD=-0.4809;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:14,1:15:10.60:11,0,410	0/0:7,0:7:18.06:0,18,251	0/0:44,0:19:48.05:0,48,589	0/0:39,0:8:17.46:0,17,158	0/0:32,0:31:75.20:0,75,969	0/0:20,0:19:51.15:0,51,660	0/0:18,0:18:42.13:0,42,569	0/0:37,0:37:81.72:0,82,1089	0/1:12,1:13:15.58:16,0,343	0/1:14,1:10:16.85:17,0,347	0/1:14,1:14:9.68:10,0,410	0/1:10,1:11:13.06:13,0,371	0/1:5,1:6:28.30:28,0,147	0/0:5,0:5:15.02:0,15,188	0/0:14,1:14:39.13:0,39,545	0/0:19,1:20:10.48:0,10,709	0/0:15,0:15:42.06:0,42,515	0/0:13,0:12:30.06:0,30,398	0/0:25,0:24:63.20:0,63,859	0/0:21,0:21:54.06:0,54,681	0/1:14,1:13:19.80:20,0,306	1/1:2,1:2:3.01:47,3,0	0/1:8,1:9:19.65:20,0,308	0/0:3,0:3:9.03:0,9,126	0/0:16,0:16:45.06:0,45,591	0/0:15,0:15:42.05:0,42,543	0/0:16,0:16:45.05:0,45,567	0/0:6,0:5:15.05:0,15,209
chr10	10628978	.	G	GAA	1621.12	PASS	AB=0.736;AC=16;AF=0.286;AN=56;BaseQRankSum=3.243;DP=520;FS=2.649;HRun=13;HaplotypeScore=81.4967;InbreedingCoeff=0.5229;MQ=69.38;MQ0=1;MQRankSum=1.941;QD=7.95;ReadPosRankSum=-5.257;VQSLOD=0.0313;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:11,0:27:36.85:83,0,37	0/0:8,0:9:17.63:0,18,144	0/0:14,0:13:6.77:0,7,122	0/0:13,0:11:13.55:0,14,85	0/1:12,0:15:21.57:22,0,88	1/1:6,0:22:2.04:92,2,0	1/1:4,0:14:20.43:80,20,0	1/1:15,13:34:35.92:440,36,0	0/1:1,0:11:8.35:34,0,8	0/0:17,0:21:0.81:0,1,156	0/0:19,0:20:17.54:0,18,158	0/0:18,0:20:38.27:0,38,314	0/0:13,0:13:25.16:0,25,226	0/0:12,0:12:20.78:0,21,184	0/0:28,0:29:65.53:0,66,558	0/0:19,0:19:38.82:0,39,343	0/1:22,0:23:2.89:3,0,296	0/0:12,0:13:26.63:0,27,223	1/1:6,10:18:35.51:377,36,0	1/1:10,17:29:0.49:417,0,0	1/1:1,9:11:19.88:249,20,0	0/0:7,0:7:5.83:0,6,53	0/0:12,0:12:14.96:0,15,131	0/0:10,0:12:11.69:0,12,150	0/0:14,0:15:17.10:0,17,146	0/0:31,0:34:41.05:0,41,383	0/0:35,0:38:40.90:0,41,552	0/0:13,0:14:26.64:0,27,223
chr10	10632004	.	ATT	A	6583.80	PASS	AB=0.565;AC=45;AF=0.804;AN=56;BaseQRankSum=0.359;DP=530;FS=0.000;HRun=14;HaplotypeScore=77.6411;InbreedingCoeff=0.7984;MQ=69.96;MQ0=4;MQRankSum=0.159;QD=16.22;ReadPosRankSum=4.154;VQSLOD=4.1371;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:6,2:27:1.80:0,2,207	1/1:2,6:8:15:139,15,0	0/0:20,0:9:17.68:0,18,176	0/0:17,0:13:4.43:0,4,150	0/0:36,0:37:65.21:0,65,1065	1/1:2,0:22:42.85:181,43,0	1/1:4,0:15:24.66:107,25,0	1/1:8,23:32:59.54:571,60,0	1/1:2,0:16:29.81:127,30,0	1/1:6,14:20:38.91:358,39,0	1/1:4,24:28:71.98:664,72,0	1/1:5,14:20:35.73:317,36,0	1/1:5,8:13:26.63:233,27,0	1/1:4,11:16:29.74:261,30,0	1/1:4,18:22:14.37:339,14,0	0/1:3,10:13:6.60:121,0,7	1/1:2,9:9:21.02:194,21,0	1/1:6,18:25:23.94:361,24,0	1/1:3,10:14:32.40:267,32,0	1/1:3,27:30:75.02:691,75,0	1/1:1,8:10:11.74:95,12,0	1/1:2,12:14:26.95:248,27,0	1/1:3,17:21:38.44:344,38,0	1/1:1,7:8:18.02:167,18,0	0/0:19,0:21:58.09:0,58,630	1/1:3,14:18:41.75:372,42,0	1/1:4,16:20:32.78:305,33,0	1/1:1,7:9:14.75:123,15,0
chr10	10632720	.	C	CT	7897.25	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-10.325;DP=484;FS=3.317;HRun=8;HaplotypeScore=46.3396;InbreedingCoeff=0.9515;MQ=80.60;MQ0=0;MQRankSum=1.672;QD=26.68;ReadPosRankSum=2.420;VQSLOD=5.5521;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:69.03:0,69,629	1/1:0,5:5:11.99:124,12,0	0/0:12,0:14:22.38:0,22,214	0/0:15,0:15:10.20:0,10,90	1/1:4,21:25:60.09:663,60,0	0/0:21,0:21:60.03:0,60,548	0/0:19,0:19:50.99:0,51,461	0/0:32,1:33:40.40:0,40,620	0/0:11,0:11:23.99:0,24,215	1/1:1,21:22:60.15:671,60,0	1/1:2,13:16:36.06:400,36,0	1/1:2,9:11:30.06:334,30,0	1/1:3,15:18:39.12:450,39,0	1/1:0,13:13:30.09:346,30,0	1/1:4,24:28:66.20:762,66,0	1/1:0,17:17:45.13:519,45,0	1/1:1,18:19:48.14:554,48,0	1/1:1,13:14:2.65:284,3,0	0/0:11,0:11:26.94:0,27,233	0/0:11,0:11:30.01:0,30,274	0/0:27,0:27:71.99:0,72,651	1/1:1,4:5:9.03:104,9,0	1/1:1,15:16:42.12:485,42,0	1/1:3,17:21:45.13:519,45,0	1/1:2,13:15:24.07:277,24,0	1/1:0,16:16:39.03:402,39,0	1/1:3,16:19:42.12:482,42,0	1/1:1,14:16:47.95:522,48,0
chr10	10632836	.	C	CTT	2101.82	PASS	AB=0.639;AC=35;AF=0.625;AN=56;BaseQRankSum=7.447;DP=464;FS=3.909;HRun=12;HaplotypeScore=71.2805;InbreedingCoeff=0.3629;MQ=54.54;MQ0=6;MQRankSum=-0.636;QD=6.06;ReadPosRankSum=-0.017;VQSLOD=-0.0961;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:24:44.48:0,44,384	1/1:6,0:12:9.58:32,10,0	0/0:10,0:5:5.07:0,5,37	0/0:10,0:7:2.75:0,3,14	1/1:5,1:21:32.04:111,32,0	1/1:3,13:19:29.37:345,29,0	1/1:4,10:15:18.01:230,18,0	0/0:18,0:21:19.06:0,19,250	1/1:5,11:16:21.02:272,21,0	1/1:4,0:18:13.91:103,14,0	1/1:4,0:7:7.36:26,7,0	0/1:8,0:11:39.13:39,0,42	0/1:8,0:13:9.50:36,0,10	1/1:7,0:17:30.01:112,30,0	0/1:9,1:27:39.13:79,0,39	1/1:9,1:21:7.67:116,8,0	1/1:4,4:19:9.16:204,9,0	1/1:9,0:17:22.15:113,22,0	0/0:17,0:16:11.08:0,11,109	0/0:16,0:16:26.84:0,27,239	0/0:16,0:14:35.78:0,36,317	0/1:6,0:13:7.54:40,0,8	1/1:5,0:15:19.84:69,20,0	1/1:1,0:9:9.98:35,10,0	0/1:2,1:11:10.08:82,0,10	1/1:14,0:24:0.67:71,1,0	0/1:6,1:25:30.73:110,0,31	0/1:3,0:7:9.40:67,0,9
chr10	10636867	.	TA	T	2621.29	PASS	AB=0.900;AC=15;AF=0.268;AN=56;BaseQRankSum=10.343;DP=649;FS=13.508;HRun=11;HaplotypeScore=67.8657;InbreedingCoeff=0.8802;MQ=74.67;MQ0=1;MQRankSum=-0.048;QD=13.65;ReadPosRankSum=-0.375;VQSLOD=2.1424;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:32:62.61:0,63,846	0/0:8,0:8:3.61:0,4,175	0/0:17,2:18:9.05:0,9,238	0/0:26,0:22:18.81:0,19,315	0/1:24,3:27:1.77:2,0,585	1/1:4,18:22:50.92:419,51,0	1/1:4,16:20:41.94:345,42,0	1/1:7,21:28:59.87:485,60,0	1/1:5,14:19:25.08:325,25,0	0/0:21,3:24:10.85:0,11,515	0/0:20,0:20:39.36:0,39,558	0/0:22,2:24:20.07:0,20,622	0/0:26,1:27:47.47:0,47,684	0/0:17,0:17:42.10:0,42,446	0/0:28,0:30:66:0,66,684	0/0:28,1:29:50.54:0,51,742	0/0:21,0:21:60.14:0,60,631	0/0:10,0:10:24.04:0,24,246	1/1:7,21:28:42.58:470,43,0	1/1:7,25:32:71.88:591,72,0	1/1:4,12:16:6.85:178,7,0	0/0:22,0:22:54.14:0,54,576	0/0:26,2:28:32.48:0,32,537	0/0:23,0:23:60.10:0,60,621	0/0:23,0:23:51.12:0,51,538	0/0:26,1:27:63.07:0,63,641	0/0:25,2:27:16.87:0,17,574	0/0:17,1:19:29.33:0,29,499
chr10	10638179	.	GA	G	7439.21	PASS	AB=0.957;AC=38;AF=0.679;AN=56;BaseQRankSum=4.075;DP=617;FS=12.411;HRun=10;HaplotypeScore=73.7364;InbreedingCoeff=0.8837;MQ=77.91;MQ0=2;MQRankSum=-1.075;QD=17.18;ReadPosRankSum=5.059;VQSLOD=4.3680;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:79.99:0,80,847	1/1:0,9:10:29.03:240,29,0	0/1:47,0:29:1.49:1,0,189	0/0:25,0:18:15.78:0,16,145	1/1:5,30:35:80.96:703,81,0	0/0:1,0:18:45.45:0,45,227	0/0:5,0:15:23.05:0,23,144	0/0:38,0:37:87.18:0,87,924	0/0:2,0:19:42.77:0,43,232	1/1:1,17:19:53.01:444,53,0	1/1:1,24:26:65:553,65,0	1/1:1,20:21:47.99:417,48,0	1/1:2,19:21:44.99:391,45,0	1/1:3,10:13:26.99:234,27,0	1/1:1,32:33:74.98:651,75,0	1/1:1,30:31:83.98:729,84,0	1/1:5,32:37:53.80:696,54,0	1/1:2,12:14:23.99:208,24,0	0/1:19,2:21:3.95:4,0,392	0/0:23,0:23:48.10:0,48,508	0/0:14,0:14:39.09:0,39,422	1/1:1,10:11:24:208,24,0	1/1:1,14:15:32.79:286,33,0	1/1:2,15:17:38.99:339,39,0	1/1:0,17:17:44.99:391,45,0	1/1:2,18:20:53.99:469,54,0	1/1:2,17:20:47.03:397,47,0	1/1:2,3:5:9:78,9,0
chr10	10638575	.	G	GT	6593	PASS	AC=50;AF=1.000;AN=50;DP=369;FS=0.000;HRun=0;HaplotypeScore=130.0733;InbreedingCoeff=0.0031;MQ=32.60;MQ0=0;QD=18.16;VQSLOD=6.5624;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,16:15:32.92:279,33,0	1/1:1,5:6:14.97:122,15,0	./.	./.	1/1:1,16:15:29.40:203,29,0	1/1:0,14:14:38.90:310,39,0	1/1:1,9:9:26.93:216,27,0	1/1:0,15:7:21.04:213,21,0	1/1:0,10:10:17.92:138,18,0	1/1:0,21:21:60.07:569,60,0	1/1:1,16:17:32.79:241,33,0	1/1:1,15:16:35.02:260,35,0	1/1:2,19:21:50.89:438,51,0	1/1:0,22:19:32.25:228,32,0	1/1:1,20:19:47.90:396,48,0	1/1:0,15:15:38.84:319,39,0	1/1:0,13:11:23.93:191,24,0	1/1:1,10:10:30.03:298,30,0	1/1:1,17:17:45.08:454,45,0	1/1:0,4:4:11.98:96,12,0	1/1:1,3:4:2.99:23,3,0	1/1:0,6:6:11.91:88,12,0	1/1:0,15:15:29.49:212,29,0	1/1:5,12:16:29.86:235,30,0	1/1:0,14:14:35.92:287,36,0	1/1:0,12:12:36.01:349,36,0	1/1:0,26:24:50.79:428,51,0	./.
chr10	10638577	.	CCA	C	6477.29	PASS	AC=50;AF=1.000;AN=50;BaseQRankSum=1.263;DP=363;FS=5.003;HRun=0;HaplotypeScore=132.7265;InbreedingCoeff=-0.0024;MQ=31.82;MQ0=0;MQRankSum=-2.486;QD=18.14;ReadPosRankSum=2.243;VQSLOD=4.9868;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,15:15:13.69:206,14,0	1/1:1,5:6:12.88:102,13,0	./.	./.	1/1:2,15:15:29.89:235,30,0	1/1:0,14:14:38.95:321,39,0	1/1:1,9:9:24.85:200,25,0	1/1:0,15:7:21.05:220,21,0	1/1:0,10:10:17.99:154,18,0	1/1:0,21:21:60.10:588,60,0	1/1:0,16:16:29.85:227,30,0	1/1:0,16:16:35.97:309,36,0	1/1:1,20:21:46.82:405,47,0	1/1:0,22:19:32.60:255,33,0	1/1:1,20:19:47.96:410,48,0	1/1:0,15:15:38.96:343,39,0	1/1:0,13:11:23.97:199,24,0	1/1:1,10:10:25.53:262,26,0	1/1:1,17:17:42.98:443,43,0	1/1:0,4:4:11.99:100,12,0	1/1:1,3:4:2.99:24,3,0	1/1:0,6:6:11.94:92,12,0	1/1:0,14:14:29.90:236,30,0	1/1:4,12:15:18.67:135,19,0	1/1:0,14:14:35.96:297,36,0	1/1:0,9:9:27.04:271,27,0	1/1:0,26:25:50.99:443,51,0	./.
chr10	10638582	.	TG	T	9046.97	PASS	AC=50;AF=1.000;AN=50;DP=370;FS=0.000;HRun=2;HaplotypeScore=121.2330;InbreedingCoeff=-0.0110;MQ=27.88;MQ0=4;QD=25.20;VQSLOD=4.6065;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,15:13:26.89:330,27,0	1/1:0,5:5:12.04:148,12,0	./.	./.	1/1:0,16:14:27.07:309,27,0	1/1:0,14:14:39.12:480,39,0	1/1:0,9:8:24.08:293,24,0	1/1:1,15:7:21.07:267,21,0	1/1:1,10:11:18.05:215,18,0	1/1:0,23:23:63.16:774,63,0	1/1:0,16:16:30.09:360,30,0	1/1:1,16:17:36.11:432,36,0	1/1:3,19:22:48.14:574,48,0	1/1:0,22:19:33.10:395,33,0	1/1:4,20:22:51.13:601,51,0	1/1:3,14:17:36.11:437,36,0	1/1:1,13:12:24.08:295,24,0	1/1:1,10:10:27.08:335,27,0	1/1:0,17:16:39.12:498,39,0	1/1:0,4:4:12.04:147,12,0	1/1:0,3:3:3.01:37,3,0	1/1:0,6:6:12.04:142,12,0	1/1:0,14:14:30.09:353,30,0	1/1:1,12:12:18.06:216,18,0	1/1:0,14:14:36.11:442,36,0	1/1:0,9:9:27.09:337,27,0	1/1:0,26:25:51.01:631,51,0	./.
chr10	10639130	.	AAAC	A	8233.38	PASS	AB=1.000;AC=51;AF=0.911;AN=56;BaseQRankSum=-1.977;DP=405;FS=7.335;HRun=0;HaplotypeScore=78.6489;InbreedingCoeff=0.3858;MQ=54.90;MQ0=3;MQRankSum=2.537;QD=21.06;ReadPosRankSum=0.271;VQSLOD=3.5292;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:25:54.66:350,55,0	1/1:1,5:6:11.99:171,12,0	0/0:14,0:5:6.68:0,7,86	0/1:13,0:5:0.47:0,0,17	1/1:8,20:28:59.71:618,60,0	1/1:21,0:20:38.27:335,38,0	1/1:10,0:8:17.83:133,18,0	0/1:16,0:14:5.80:147,0,6	1/1:11,0:10:3.49:132,3,0	1/1:15,2:17:45.99:543,46,0	1/1:9,3:12:35.33:362,35,0	1/1:12,3:15:44.65:486,45,0	1/1:5,2:7:15.29:193,15,0	1/1:10,4:13:25.37:307,25,0	1/1:5,11:16:17.90:223,18,0	1/1:12,4:16:35.75:398,36,0	1/1:11,4:15:41.73:503,42,0	1/1:6,1:7:18.03:257,18,0	0/1:13,0:11:6.16:114,0,6	1/1:15,1:16:47.72:461,48,0	1/1:7,0:7:10.37:47,10,0	1/1:3,6:9:22.17:249,22,0	1/1:12,1:13:32.76:353,33,0	1/1:2,7:9:3.01:51,3,0	1/1:4,16:20:29.48:351,29,0	1/1:5,24:28:71.03:783,71,0	1/1:9,3:11:28.81:319,29,0	1/1:12,2:14:34.84:347,35,0
chr10	10639131	.	AAC	A	7650.28	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-1.242;DP=406;FS=5.347;HRun=0;HaplotypeScore=74.6350;InbreedingCoeff=0.6580;MQ=54.80;MQ0=3;MQRankSum=2.241;QD=20.19;ReadPosRankSum=0.415;VQSLOD=4.7526;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:18,7:25:65.13:786,65,0	1/1:5,1:6:12.03:140,12,0	0/0:14,0:5:10.78:0,11,76	0/0:12,0:5:2.36:0,2,19	1/1:26,1:27:59.36:484,59,0	1/1:21,0:20:48.35:404,48,0	1/1:10,0:8:20.89:162,21,0	1/1:16,0:14:12.63:212,13,0	1/1:11,0:10:19.92:151,20,0	1/1:16,1:17:45.42:387,45,0	1/1:12,0:12:31.63:265,32,0	1/1:15,0:15:44.49:410,44,0	1/1:6,1:7:17.22:167,17,0	1/1:14,0:13:26.19:223,26,0	1/1:15,0:15:19.52:190,20,0	1/1:16,2:18:43.46:408,43,0	1/1:16,0:16:45.56:384,46,0	1/1:5,2:7:18.01:182,18,0	1/1:14,0:12:1.28:177,1,0	1/1:12,4:16:47:381,47,0	1/1:7,0:7:14.05:88,14,0	1/1:9,0:9:23.84:188,24,0	1/1:12,1:13:33.52:287,34,0	1/1:7,1:8:3.01:32,3,0	1/1:18,2:20:29.19:281,29,0	1/1:27,1:27:69.76:612,70,0	1/1:12,0:11:32.80:271,33,0	1/1:14,1:15:40.99:376,41,0
chr10	10639132	.	AC	A	6491.66	PASS	AB=0.967;AC=52;AF=0.929;AN=56;BaseQRankSum=1.645;DP=404;FS=2.254;HRun=1;HaplotypeScore=72.7480;InbreedingCoeff=0.4879;MQ=56.19;MQ0=3;MQRankSum=2.845;QD=16.69;ReadPosRankSum=1.148;VQSLOD=5.1565;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:23,1:24:66.76:554,67,0	1/1:6,0:6:12:105,12,0	0/0:15,0:6:8.34:0,8,83	0/1:13,0:5:1.95:2,0,15	1/1:26,1:27:29.64:374,30,0	1/1:21,0:20:49.76:417,50,0	1/1:10,0:8:20.60:153,21,0	1/1:14,2:14:4.91:180,5,0	1/1:11,0:10:24.02:148,24,0	1/1:15,2:17:49.66:360,50,0	1/1:12,0:12:26.42:233,26,0	1/1:14,1:15:44.33:350,44,0	1/1:6,1:7:17.96:153,18,0	1/1:14,0:13:26.45:202,26,0	1/1:13,2:15:14.04:139,14,0	1/1:17,1:18:38.10:326,38,0	1/1:15,1:16:47.15:343,47,0	1/1:6,0:6:17.65:134,18,0	0/1:13,1:12:4.18:182,0,4	1/1:16,0:16:47.73:374,48,0	1/1:6,1:7:15.77:111,16,0	1/1:8,1:9:23.65:164,24,0	1/1:13,0:13:27.79:212,28,0	1/1:8,0:8:3:26,3,0	1/1:20,0:20:20.77:189,21,0	1/1:26,1:26:69.70:537,70,0	1/1:11,1:11:30.54:230,31,0	1/1:15,0:15:35.90:295,36,0
chr10	10639293	.	C	CCA	452.82	PASS	AB=0.936;AC=26;AF=0.650;AN=40;BaseQRankSum=-0.752;DP=420;FS=3.630;HRun=0;HaplotypeScore=69.4784;InbreedingCoeff=0.1793;MQ=57.36;MQ0=7;MQRankSum=0.305;QD=1.98;ReadPosRankSum=-1.647;VQSLOD=1.0660;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:27:2.57:10,3,0	1/1:2,1:3:3.01:44,3,0	./.	./.	0/0:10,0:10:2.99:0,3,24	0/0:17,0:17:0.47:0,0,1	0/0:16,0:16:2.55:0,3,11	0/1:33,0:33:0:0,0,0	./.	1/1:9,0:9:2.98:21,3,0	./.	1/1:14,0:14:2.99:24,3,0	1/1:10,0:9:3.01:41,3,0	1/1:2,3:7:3.01:44,3,0	./.	1/1:16,4:22:2.73:43,3,0	0/1:17,8:26:10.45:113,0,10	1/1:16,5:19:3.90:46,4,0	./.	0/0:24,0:23:5.68:0,6,28	./.	1/1:11,0:10:3.01:40,3,0	1/1:9,0:9:2.96:19,3,0	0/1:17,0:17:12.81:14,0,13	0/0:14,0:13:8.97:0,9,73	1/1:10,0:10:14.09:98,14,0	0/1:9,0:9:12.81:14,0,13	./.
chr10	10639320	.	CACACACACACACACACACACACACAG	C	902.86	PASS	AB=0.655;AC=7;AF=0.125;AN=56;BaseQRankSum=1.752;DP=466;FS=12.795;HRun=0;HaplotypeScore=233.8701;InbreedingCoeff=0.7160;MQ=52.75;MQ0=12;MQRankSum=0.735;QD=13.89;ReadPosRankSum=-4.430;VQSLOD=0.2960;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:35:87.28:0,87,4817	0/0:3,0:3:9.03:0,9,745	0/0:8,0:3:9.03:0,9,236	0/0:27,0:6:16.27:0,16,359	0/0:13,0:12:21.07:0,21,1488	0/0:17,0:17:32.60:0,33,2090	0/0:19,0:19:7.35:0,7,1578	0/1:9,10:19:99:255,0,220	0/0:19,0:19:18.08:0,18,2000	0/0:14,0:13:39.11:0,39,2720	0/0:7,0:7:11.16:0,11,938	0/0:19,0:19:46.10:0,46,3592	0/0:15,0:14:35.14:0,35,2424	0/0:14,0:14:27.02:0,27,2054	0/0:19,0:19:38.98:0,39,2857	0/0:28,0:28:57.17:0,57,4045	0/0:27,0:27:55.43:0,55,4686	0/0:21,0:18:40.95:0,41,2572	1/1:12,0:12:17.91:150,18,0	1/1:7,14:20:9.02:461,9,0	1/1:13,0:12:10.77:175,11,0	0/0:12,0:11:24.08:0,24,2392	0/0:13,0:13:21.54:0,22,1296	0/0:19,0:18:39.13:0,39,3584	0/0:13,0:12:30.10:0,30,2472	0/0:19,0:18:49.74:0,50,3760	0/0:12,0:12:36.12:0,36,2891	0/0:5,0:4:8.97:0,9,733
chr10	10639342	.	CACAG	C	1536.39	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-0.106;DP=495;FS=6.939;HRun=0;HaplotypeScore=88.7864;InbreedingCoeff=0.9468;MQ=67.20;MQ0=10;MQRankSum=-0.122;QD=13.24;ReadPosRankSum=0.178;VQSLOD=2.4815;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:26:56.57:0,57,460	0/0:6,0:6:18:0,18,207	0/0:24,0:16:38.66:0,39,409	0/0:36,0:18:36.21:0,36,411	0/0:15,0:14:23.89:0,24,203	1/1:19,0:19:29.71:269,30,0	1/1:2,12:14:8.54:117,9,0	1/1:21,0:21:30.10:359,30,0	1/1:18,0:18:41.45:340,41,0	0/0:16,0:15:36.04:0,36,371	0/0:8,0:8:11.88:0,12,107	0/0:18,0:18:48.47:0,48,585	0/0:15,0:15:38.95:0,39,491	0/0:13,0:13:20.96:0,21,271	0/0:21,0:21:50.86:0,51,527	0/0:24,0:24:47.77:0,48,490	0/0:24,0:24:47.95:0,48,649	0/0:21,0:18:42.31:0,42,397	1/1:18,0:17:47.95:416,48,0	1/1:14,0:14:6.02:77,6,0	1/1:12,0:12:17.45:150,17,0	0/0:12,0:12:27.06:0,27,429	0/0:12,0:12:21.02:0,21,234	0/0:18,0:17:36.05:0,36,475	0/0:14,0:13:29.99:0,30,313	0/0:32,0:31:78.16:0,78,872	0/0:18,0:18:50.90:0,51,553	0/0:5,0:4:9:0,9,121
chr10	10639946	.	TAAAC	T	11557.58	PASS	AB=0.583;AC=35;AF=0.625;AN=56;BaseQRankSum=6.005;DP=709;FS=3.320;HRun=0;HaplotypeScore=124.3944;InbreedingCoeff=0.9100;MQ=67.63;MQ0=4;MQRankSum=1.549;QD=27.26;ReadPosRankSum=4.132;VQSLOD=4.7754;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:96.33:0,96,2140	1/1:4,8:12:21.07:339,21,0	0/0:30,0:25:12.04:0,12,241	0/0:23,0:19:18.11:0,18,582	1/1:5,14:18:33.11:525,33,0	0/0:20,0:20:33.11:0,33,767	0/0:31,0:31:72.22:0,72,1623	0/0:34,0:34:36.10:0,36,669	0/0:21,0:21:51.18:0,51,1209	1/1:5,13:18:39.13:626,39,0	1/1:9,14:23:42.14:679,42,0	1/1:7,12:19:30.10:484,30,0	1/1:6,25:31:66.19:1066,66,0	1/1:8,11:19:21.07:339,21,0	1/1:16,29:45:72.25:1163,72,0	1/1:8,16:25:51.17:824,51,0	1/1:13,18:31:12.50:646,12,0	1/1:10,5:15:14.94:210,15,0	0/0:21,0:20:24.08:0,24,427	0/0:37,0:37:66.19:0,66,1136	0/0:26,0:26:33.11:0,33,567	1/1:9,14:23:39.13:630,39,0	1/1:11,15:26:33.01:526,33,0	1/1:7,23:30:42.14:679,42,0	1/1:4,13:17:36.12:581,36,0	1/1:10,14:24:39.13:630,39,0	1/1:7,26:33:71.26:1162,71,0	0/1:4,10:14:40.62:448,0,41
chr10	10639974	.	C	CAAAG	4327.23	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-12.457;DP=693;FS=0.416;HRun=0;HaplotypeScore=155.1321;InbreedingCoeff=0.9984;MQ=73.14;MQ0=2;MQRankSum=7.023;QD=37.63;ReadPosRankSum=-3.841;VQSLOD=3.8587;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,108,1612	0/0:8,0:8:21.06:0,21,252	0/0:20,0:16:32.97:0,33,396	0/0:33,0:29:44.73:0,45,682	0/0:20,0:19:50.96:0,51,517	0/0:20,0:20:56.98:0,57,762	0/0:39,0:39:99:0,108,1439	1/1:9,31:43:99:1232,108,0	0/0:22,0:22:63.13:0,63,1003	0/0:20,0:20:59.86:0,60,629	0/0:15,0:15:44.35:0,44,512	0/0:19,0:19:47.79:0,48,482	0/0:34,0:34:90.12:0,90,985	0/0:19,0:19:42.01:0,42,421	0/0:37,0:37:93.09:0,93,1025	0/0:26,0:26:78.11:0,78,832	0/0:27,0:27:68.56:0,69,705	0/0:15,0:15:38.81:0,39,335	1/1:3,15:18:48.06:769,48,0	1/1:3,27:31:78.02:1609,78,0	1/1:3,19:23:27.09:717,27,0	0/0:21,0:21:59.77:0,60,613	0/0:19,0:19:38.79:0,39,423	0/0:29,0:29:60.08:0,60,648	0/0:21,0:21:57.45:0,57,593	0/0:22,0:22:62.90:0,63,653	0/0:36,0:36:99:0,102,1095	0/0:14,0:14:41.91:0,42,433
chr10	10640289	.	T	TACTA	4419.73	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-9.366;DP=681;FS=0.504;HRun=0;HaplotypeScore=101.7704;InbreedingCoeff=0.9963;MQ=90.39;MQ0=0;MQRankSum=-5.456;QD=60.54;ReadPosRankSum=2.013;VQSLOD=6.7933;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:39.13:0,39,728	0/0:12,0:12:30.10:0,30,556	0/0:31,0:31:78.22:0,78,1348	0/0:22,0:22:53.36:0,53,988	0/0:27,0:27:75.20:0,75,1293	1/1:4,22:28:57.20:1519,57,0	1/1:5,20:25:60.21:1544,60,0	0/0:36,0:36:93.29:0,93,1645	1/1:1,19:20:51.18:1357,51,0	0/0:26,0:26:72.25:0,72,1333	0/0:21,0:21:63.19:0,63,1110	0/0:28,0:28:81.26:0,81,1480	0/0:31,0:31:87.26:0,87,1551	0/0:17,0:17:48.16:0,48,895	0/0:31,0:31:87.29:0,87,1593	0/0:37,1:38:25.30:0,25,1787	0/0:18,0:18:48.16:0,48,889	0/0:12,0:12:33.10:0,33,585	0/0:24,0:24:66.19:0,66,1112	0/0:31,0:31:87.30:0,87,1616	0/0:29,0:29:84.25:0,84,1469	0/0:24,0:24:66.21:0,66,1202	0/0:23,0:23:66.23:0,66,1232	0/0:21,0:21:51.11:0,51,884	0/0:18,0:18:48.16:0,48,865	0/0:21,0:21:60.21:0,60,1102	0/0:47,0:46:99:0,126,2301	0/0:6,0:6:18.06:0,18,336
chr10	10641186	.	GTAACTCCAGTTCCAGGGGATCTGA	G	18063.87	PASS	AB=1.000;AC=49;AF=0.875;AN=56;BaseQRankSum=9.634;DP=673;FS=2.058;HRun=0;HaplotypeScore=343.0870;InbreedingCoeff=0.5915;MQ=56.41;MQ0=2;MQRankSum=-6.688;QD=31.58;ReadPosRankSum=6.064;VQSLOD=1.8466;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:75.23:0,75,6240	1/1:6,10:16:12.04:649,12,0	0/0:28,0:24:24.08:0,24,1025	0/0:31,0:29:48.16:0,48,2291	1/1:8,28:36:12.44:372,12,0	1/1:4,15:19:15.05:939,15,0	1/1:10,11:21:3.01:188,3,0	1/1:19,0:19:3.01:56,3,0	1/1:5,14:19:15.05:943,15,0	1/1:6,16:22:36.10:1193,36,0	1/1:7,16:23:12.04:456,12,0	1/1:12,19:31:27.09:1696,27,0	1/1:8,21:29:21.54:1321,22,0	1/1:9,20:29:21.54:996,22,0	1/1:7,26:33:30.10:1785,30,0	1/1:9,20:29:21.07:1320,21,0	1/1:7,17:24:2.13:187,2,0	1/1:3,5:8:5.92:377,6,0	1/1:17,0:16:6.02:202,6,0	1/1:20,0:19:21.05:463,21,0	0/1:23,0:23:4.07:16,0,4	1/1:8,23:31:18.06:730,18,0	1/1:10,19:29:8.87:374,9,0	1/1:10,10:20:6.02:281,6,0	1/1:8,12:20:15.05:653,15,0	1/1:2,18:20:38.25:1574,38,0	1/1:9,21:30:20.30:1223,20,0	1/1:4,0:4:3.01:68,3,0
chr10	10641211	.	TAACTCCA	T	3581.73	PASS	AB=0.972;AC=30;AF=0.536;AN=56;BaseQRankSum=12.634;DP=511;FS=0.000;HRun=0;HaplotypeScore=193.8437;InbreedingCoeff=-0.2421;MQ=58.59;MQ0=2;MQRankSum=-7.656;QD=9.89;ReadPosRankSum=10.575;VQSLOD=0.6982;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:38:99:0,114,4494	0/1:10,0:10:1.47:119,0,1	0/0:33,0:28:81.28:0,81,2968	0/0:33,0:31:90.02:0,90,3164	0/0:28,0:28:0.09:0,0,751	0/1:16,0:16:83.85:216,0,84	1/1:11,0:11:3.01:47,3,0	0/1:7,0:7:6.58:7,0,599	1/1:14,0:15:15.05:238,15,0	0/1:16,0:16:99:174,0,587	0/1:18,0:18:72.44:72,0,350	0/1:23,0:23:99:388,0,411	1/1:21,0:21:21.07:333,21,0	0/1:22,0:22:73.25:178,0,73	0/1:26,0:26:99:404,0,112	1/1:20,0:20:21.07:333,21,0	0/1:18,0:18:38.54:39,0,121	0/1:6,0:6:76.84:86,0,77	0/1:6,1:6:50.47:50,0,406	0/1:9,8:16:32.43:32,0,810	0/0:15,0:15:2.34:0,2,575	0/1:24,0:24:99:137,0,353	0/1:20,0:20:45.19:45,0,279	1/1:10,0:10:2.38:46,2,0	0/1:12,0:12:12:91,0,12	0/1:19,0:19:99:217,0,614	1/1:22,0:22:20.39:303,20,0	1/1:2,0:2:2.99:24,3,0
chr10	10641219	.	GTTCCAGGGGAT	G	4808.94	PASS	AB=0.977;AC=23;AF=0.426;AN=54;BaseQRankSum=12.890;DP=560;FS=1.561;HRun=0;HaplotypeScore=241.9765;InbreedingCoeff=-0.4705;MQ=64.03;MQ0=1;MQRankSum=-10.675;QD=12.14;ReadPosRankSum=12.141;VQSLOD=1.2489;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:40:99:0,123,6643	0/1:11,0:11:99:185,0,180	0/0:30,0:29:57.58:0,58,3183	0/0:32,0:30:81.23:0,81,3594	0/0:31,0:31:61.37:0,61,2086	0/1:17,0:17:99:328,0,329	1/1:11,0:11:3.01:70,3,0	0/0:15,0:15:42.14:0,42,1887	0/1:19,0:19:99:326,0,623	0/1:17,0:17:99:236,0,975	0/1:22,0:22:32.46:32,0,1360	0/1:23,0:23:99:595,0,661	1/1:21,0:21:21.54:495,22,0	0/1:23,0:23:99:233,0,371	0/1:28,0:28:99:589,0,477	0/1:24,0:24:99:461,0,612	0/1:21,0:21:52.56:53,0,748	0/1:6,0:6:99:132,0,166	0/1:5,1:6:64.64:65,0,500	0/1:11,8:18:27.35:27,0,1619	0/0:14,0:14:35.70:0,36,1254	0/1:25,0:25:99:100,0,869	0/1:23,0:23:35.64:36,0,1186	0/1:14,0:14:55.66:56,0,422	0/1:14,0:14:99:114,0,368	0/1:24,0:24:99:292,0,1555	0/1:28,0:27:99:385,0,892	./.
chr10	10641237	.	C	CTAA	4864.26	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-6.689;DP=653;FS=6.165;HRun=0;HaplotypeScore=194.5340;InbreedingCoeff=0.9451;MQ=65.22;MQ0=0;MQRankSum=-6.187;QD=57.23;ReadPosRankSum=-2.133;VQSLOD=4.6462;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:40:99:0,123,2125	0/0:10,0:10:7.38:0,7,108	0/0:20,0:19:54.10:0,54,869	0/0:20,0:21:51.10:0,51,855	0/0:33,0:33:55.75:0,56,1000	0/0:18,0:18:24.95:0,25,383	0/0:12,0:12:11.93:0,12,170	1/1:3,27:32:93.32:2143,93,0	0/0:23,0:23:36.12:0,36,610	0/0:21,0:21:54.19:0,54,951	0/0:26,0:26:45.06:0,45,730	0/0:34,0:34:71.20:0,71,1081	0/0:23,0:23:29.80:0,30,439	0/0:28,0:28:26.92:0,27,434	0/0:34,0:34:57.07:0,57,921	0/0:31,0:31:53.91:0,54,793	0/0:29,0:29:33.11:0,33,581	0/0:6,0:6:9.03:0,9,158	1/1:2,9:11:30.10:655,30,0	1/1:11,13:25:57.11:1191,57,0	1/1:1,15:16:42.14:876,42,0	0/0:29,0:29:39.13:0,39,649	0/0:27,0:27:42.14:0,42,725	0/0:19,0:19:27.09:0,27,475	0/0:16,0:16:13.81:0,14,216	0/0:31,0:31:69.24:0,69,1206	0/0:30,0:29:41.90:0,42,700	0/0:6,0:6:18.06:0,18,316
chr10	10644218	.	T	TA	1720.88	PASS	AB=0.757;AC=8;AF=0.143;AN=56;BaseQRankSum=-8.075;DP=455;FS=1.062;HRun=9;HaplotypeScore=46.1693;InbreedingCoeff=0.7146;MQ=66.64;MQ0=0;MQRankSum=2.163;QD=17.38;ReadPosRankSum=-3.620;VQSLOD=2.5523;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:20:44.20:0,44,372	0/0:8,0:8:17.97:0,18,154	0/0:9,0:9:8.98:0,9,78	0/0:3,0:3:9:0,9,78	0/1:20,1:21:3.60:4,0,355	0/0:26,0:26:65.98:0,66,573	0/0:12,0:12:35.99:0,36,312	1/1:4,17:22:53.95:561,54,0	0/0:15,0:15:32.99:0,33,286	0/0:21,0:21:53.96:0,54,467	0/0:25,0:25:62.95:0,63,543	0/0:11,0:11:26.98:0,27,234	0/0:16,0:16:44.99:0,45,391	0/0:17,0:17:38.96:0,39,335	0/0:24,0:24:56.92:0,57,487	0/0:17,0:17:44.95:0,45,383	0/0:18,0:18:35.86:0,36,355	0/0:12,0:12:32.15:0,32,259	1/1:3,14:17:42.11:464,42,0	1/1:5,20:25:57.01:577,57,0	0/1:3,11:14:14.18:266,0,14	0/0:12,0:12:29.72:0,30,243	0/0:17,0:17:33.04:0,33,304	0/0:4,0:4:12:0,12,104	0/0:13,0:13:32.98:0,33,282	0/0:16,0:16:38.96:0,39,335	0/0:24,0:24:50.90:0,51,433	0/0:14,0:16:46.07:0,46,377
chr10	10644965	.	G	GA	1287.40	PASS	AB=0.735;AC=27;AF=0.482;AN=56;BaseQRankSum=-3.603;DP=508;FS=8.143;HRun=17;HaplotypeScore=77.5666;InbreedingCoeff=-0.0020;MQ=72.82;MQ0=15;MQRankSum=1.004;QD=3.49;ReadPosRankSum=-0.105;VQSLOD=-0.0391;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:16,11:30:46.78:120,0,47	0/1:7,1:9:6.27:22,0,6	0/1:40,0:19:1.02:1,0,26	0/0:43,0:17:2.19:0,2,15	1/1:14,3:25:2.49:127,2,0	0/0:11,0:13:5.72:0,6,15	0/0:4,0:7:5.76:0,6,16	0/0:17,0:19:12.38:0,12,36	0/0:6,0:8:7.32:0,7,20	0/1:17,7:27:52.29:83,0,52	1/1:8,9:17:2.35:94,2,0	0/1:7,7:14:9.56:17,0,10	1/1:12,0:13:11.51:81,12,0	0/1:5,7:12:14.77:54,0,15	0/1:6,8:15:26.46:80,0,26	0/1:10,11:21:10.16:93,0,10	0/1:21,10:31:25.52:247,0,26	1/1:8,7:15:8.72:113,9,0	0/0:11,0:15:16.84:0,17,54	0/0:11,0:22:27.25:0,27,76	0/0:6,0:6:1.99:0,2,5	1/1:5,2:6:5.93:41,6,0	1/1:2,5:8:5.93:41,6,0	0/1:5,7:12:20.09:51,0,20	1/1:7,0:22:11.40:60,11,0	0/1:13,9:21:14.35:72,0,14	0/1:7,11:20:8.80:52,0,9	0/1:4,0:3:0:0,0,0
chr10	10644989	.	G	GA	2387.40	PASS	AB=1.000;AC=16;AF=0.286;AN=56;BaseQRankSum=-3.887;DP=468;FS=10.441;HRun=9;HaplotypeScore=58.6062;InbreedingCoeff=0.8163;MQ=66.85;MQ0=10;MQRankSum=-0.282;QD=13.80;ReadPosRankSum=-5.132;VQSLOD=1.2166;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:39.22:0,39,365	0/0:7,0:6:6.91:0,7,75	0/1:26,0:14:2.35:2,0,101	0/1:33,0:13:1.01:1,0,87	0/0:24,0:24:56.64:0,57,493	1/1:4,13:17:30.08:332,30,0	1/1:3,8:10:21.02:219,21,0	1/1:8,17:23:47.16:503,47,0	1/1:1,6:7:18.05:199,18,0	0/0:22,0:22:50.49:0,50,428	0/0:15,0:15:23.99:0,24,208	0/0:9,0:9:6:0,6,52	0/0:10,0:10:9.42:0,9,168	0/0:14,0:14:14.95:0,15,130	0/0:12,0:12:20.99:0,21,182	0/0:13,0:13:26.22:0,26,215	0/0:32,0:30:35.47:0,35,444	0/0:17,0:16:23.54:0,24,206	1/1:9,20:26:60.16:659,60,0	1/1:6,15:21:51.14:564,51,0	1/1:0,4:4:9.02:100,9,0	0/0:5,0:4:12:0,12,104	0/0:7,0:7:9:0,9,78	0/0:10,0:10:15:0,15,130	0/0:21,0:21:23.86:0,24,205	0/0:22,0:21:53.18:0,53,448	0/0:22,0:20:35.99:0,36,312	0/0:7,0:7:15:0,15,130
chr10	10645539	.	TGAGAGA	T	2689.75	PASS	AB=0.914;AC=35;AF=0.648;AN=54;BaseQRankSum=3.507;DP=510;FS=2.565;HRun=0;HaplotypeScore=121.3621;InbreedingCoeff=0.0996;MQ=71.76;MQ0=12;MQRankSum=1.155;QD=7.25;ReadPosRankSum=2.164;VQSLOD=2.5129;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:20:17.22:236,17,0	1/1:5,0:5:5.93:39,6,0	0/0:24,0:15:2.99:0,3,23	0/0:33,0:17:6.02:0,6,95	0/1:9,11:20:0:0,0,0	1/1:11,0:11:3.01:36,3,0	1/1:6,0:9:3.01:46,3,0	0/0:35,0:35:5.60:0,6,375	1/1:18,0:18:12.04:172,12,0	0/1:4,0:14:18.11:208,0,18	1/1:19,0:19:4.25:16,4,0	0/1:15,0:15:24.67:105,0,25	1/1:15,0:14:2.04:6,2,0	1/1:13,0:12:2.04:6,2,0	0/1:21,0:21:33.38:112,0,33	1/1:33,0:33:8.92:105,9,0	0/1:15,0:15:31.62:144,0,32	0/1:18,0:18:39.35:294,0,39	0/1:10,0:10:44.50:109,0,45	0/0:18,0:18:2.09:0,2,56	0/1:21,0:18:0.74:1,0,105	0/0:16,0:15:5.72:0,6,46	./.	0/1:25,0:23:57.53:58,0,219	1/1:15,0:14:27.08:492,27,0	1/1:16,0:15:20.79:218,21,0	1/1:29,0:29:39.30:420,39,0	1/1:3,0:6:2.97:20,3,0
chr10	10645561	.	AGAGAGAGAGAGAGTGT	A	839.85	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=1.590;DP=565;FS=14.752;HRun=0;HaplotypeScore=193.3149;InbreedingCoeff=0.3695;MQ=50.72;MQ0=33;MQRankSum=-0.276;QD=7.64;ReadPosRankSum=-3.238;VQSLOD=1.2289;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:23:60.39:60,0,613	0/0:3,0:3:9.02:0,9,166	0/0:12,0:5:12.04:0,12,263	0/0:21,0:5:6.02:0,6,192	0/0:17,0:15:8.51:0,9,117	1/1:14,12:24:2.33:136,2,0	1/1:10,0:10:9.03:207,9,0	0/0:49,0:48:99:0,105,2915	1/1:7,19:24:15.46:541,15,0	0/0:16,0:16:33.11:0,33,681	0/0:21,0:20:9.93:0,10,181	0/0:22,0:22:53.82:0,54,1146	0/0:18,0:17:12.02:0,12,186	0/0:16,0:13:6.82:0,7,81	0/0:21,0:21:10.98:0,11,275	0/0:30,0:30:8.94:0,9,93	0/0:21,0:21:53.20:0,53,1076	0/0:19,0:17:38.94:0,39,748	0/1:9,0:7:11.51:12,0,266	0/0:17,0:14:1.68:0,2,130	0/0:33,0:27:29.28:0,29,790	0/0:15,0:14:10.54:0,11,231	0/0:16,0:16:6.40:0,6,74	0/0:29,0:26:13.04:0,13,1482	0/0:21,0:18:43.04:0,43,1004	0/1:14,0:13:24.05:24,0,381	0/0:28,0:26:65.95:0,66,1408	0/0:10,0:8:8.39:0,8,118
chr10	10645567	.	AGAGAGAGTGT	A	4277.05	PASS	AB=0.956;AC=32;AF=0.571;AN=56;BaseQRankSum=1.364;DP=546;FS=4.292;HRun=0;HaplotypeScore=140.1770;InbreedingCoeff=0.0642;MQ=50.71;MQ0=34;MQRankSum=1.884;QD=10.28;ReadPosRankSum=2.764;VQSLOD=3.1380;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:25:28.62:384,29,0	1/1:4,0:4:5.29:64,5,0	0/0:7,0:2:2.99:0,3,23	0/0:12,0:3:6.02:0,6,95	0/0:16,0:14:5.43:0,5,96	1/1:24,0:22:2.96:74,3,0	1/1:12,0:12:12.04:176,12,0	0/0:48,0:45:32.30:0,32,603	1/1:27,0:25:14.62:321,15,0	0/1:15,0:15:18.25:208,0,18	1/1:19,0:18:4.73:16,5,0	0/1:19,0:19:43.30:168,0,43	1/1:14,0:13:2.52:18,3,0	1/1:17,0:14:5.68:60,6,0	0/1:5,18:23:33.38:167,0,33	1/1:30,0:30:8.93:162,9,0	0/1:23,0:23:18.02:395,0,18	0/1:18,0:16:51.90:460,0,52	0/1:8,0:6:40.39:137,0,40	0/0:20,0:17:2.26:0,2,56	0/1:34,0:28:1.32:1,0,104	0/0:4,9:12:5.55:0,6,46	0/0:14,0:14:0.47:0,0,1	0/1:27,0:24:99:140,0,256	0/1:20,0:17:99:212,0,306	1/1:17,0:16:41.87:527,42,0	0/1:29,0:27:5.58:522,0,6	1/1:9,0:7:5.92:64,6,0
chr10	10645569	.	AGAGAGTGT	A	6050.67	PASS	AB=0.927;AC=42;AF=0.778;AN=54;BaseQRankSum=-3.682;DP=538;FS=0.000;HRun=0;HaplotypeScore=122.1469;InbreedingCoeff=0.2627;MQ=50.41;MQ0=34;MQRankSum=1.122;QD=12.48;ReadPosRankSum=1.471;VQSLOD=3.1059;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:25:43.77:557,44,0	1/1:4,0:4:9.03:136,9,0	./.	0/0:11,0:2:6.01:0,6,65	0/0:16,0:14:5.64:0,6,96	1/1:24,0:22:2.75:60,3,0	1/1:12,0:12:12.04:160,12,0	0/1:48,0:44:70.45:74,0,70	1/1:27,0:25:14.73:260,15,0	1/1:15,0:15:25.81:368,26,0	1/1:6,0:18:3:32,3,0	1/1:16,0:16:30.89:401,31,0	1/1:1,13:13:2.59:57,3,0	1/1:5,12:14:5.97:94,6,0	1/1:22,2:24:9.92:242,10,0	1/1:1,28:30:8.91:241,9,0	1/1:20,0:20:44.49:675,44,0	0/1:19,0:17:22.82:580,0,23	1/1:9,0:7:5.57:109,6,0	0/0:20,0:17:2.59:0,3,31	1/1:32,0:26:6.71:63,7,0	0/1:11,0:10:0:1,0,0	0/1:3,11:14:0.03:0,0,0	0/1:27,0:24:0.89:221,0,1	0/1:20,0:17:99:146,0,251	1/1:18,0:17:42.14:610,42,0	1/1:28,0:27:62.78:877,63,0	1/1:9,0:7:6.02:89,6,0
chr10	10645571	.	AGAGTGTGTGTGTGTGT	A	1328.08	PASS	AB=1.000;AC=23;AF=0.426;AN=54;BaseQRankSum=-5.306;DP=538;FS=14.174;HRun=0;HaplotypeScore=182.5113;InbreedingCoeff=-0.0417;MQ=50.51;MQ0=34;MQRankSum=0.239;QD=3.57;ReadPosRankSum=-3.101;VQSLOD=1.4529;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:25:64.43:64,0,598	0/1:4,0:4:12.30:12,0,191	./.	0/0:9,0:1:2.88:0,3,15	0/0:17,0:14:5.58:0,6,333	1/1:24,0:22:2.33:43,2,0	0/0:13,0:13:0.03:0,0,193	1/1:48,0:44:47.38:353,47,0	0/1:27,0:25:2.48:151,0,2	0/1:15,0:15:99:110,0,266	1/1:19,0:18:3.31:15,3,0	0/1:15,0:15:31.62:32,0,646	0/0:14,0:13:3.90:0,4,85	0/0:17,0:14:6.02:0,6,169	0/1:23,0:23:12.45:12,0,131	0/0:30,0:30:8.95:0,9,123	0/0:21,0:21:30.95:0,31,1161	0/1:20,0:18:47.23:47,0,754	1/1:3,7:8:17.84:261,18,0	0/0:6,15:18:1.84:0,2,7	1/1:31,0:26:20.87:157,21,0	0/1:11,0:10:0:1,0,0	0/1:14,0:14:0.10:0,0,0	0/1:25,0:22:78.69:79,0,669	0/0:20,0:17:7.24:0,7,1648	0/1:18,0:17:57.45:57,0,864	0/1:31,0:29:75.54:76,0,1233	0/1:10,0:7:8.96:9,0,200
chr10	10649976	.	GCTTTTCAGCCTCACTAGAGCTATGGGGAGTTAA	G	23904.67	PASS	AB=0.952;AC=33;AF=0.589;AN=56;BaseQRankSum=14.991;DP=571;FS=8.090;HRun=0;HaplotypeScore=463.1734;InbreedingCoeff=0.8277;MQ=86.55;MQ0=0;MQRankSum=-12.620;QD=92.65;ReadPosRankSum=8.350;VQSLOD=2.0661;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:72.25:0,72,9086	1/1:5,2:7:3.01:259,3,0	0/0:19,0:19:51.17:0,51,3557	0/0:28,0:28:78.23:0,78,4991	0/0:23,0:23:60.21:0,60,8072	0/0:38,0:38:99:0,108,12072	0/0:26,0:26:75.24:0,75,8329	0/0:52,0:52:99:0,144,10860	0/1:19,1:20:99:204,0,5863	1/1:6,10:16:30.10:1998,30,0	1/1:7,7:14:18.06:1552,18,0	1/1:9,11:20:27.09:2326,27,0	1/1:5,7:12:21.07:1810,21,0	1/1:6,9:15:24.08:2069,24,0	1/1:10,8:18:12.04:1034,12,0	1/1:18,10:28:24.08:2069,24,0	1/1:9,1:10:3.01:259,3,0	1/1:6,4:10:3.01:259,3,0	0/0:27,0:27:81.25:0,81,6447	0/0:25,0:25:75.26:0,75,9953	0/0:32,0:32:90.31:0,90,10508	1/1:3,9:12:24.08:2069,24,0	1/1:6,9:15:21.07:1810,21,0	1/1:4,7:11:6.02:517,6,0	0/0:17,0:17:48.16:0,48,5639	1/1:9,15:24:45.13:2826,45,0	1/1:7,8:15:21.07:1810,21,0	1/1:3,8:11:12.04:1034,12,0
chr10	10650181	.	T	TC	1086.77	PASS	AB=0.796;AC=38;AF=0.679;AN=56;BaseQRankSum=-5.378;DP=263;FS=15.738;HRun=10;HaplotypeScore=36.4409;InbreedingCoeff=0.1462;MQ=93.16;MQ0=1;MQRankSum=-0.617;QD=6.51;ReadPosRankSum=-0.873;VQSLOD=-0.0452;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,10:12:6.02:64,6,0	1/1:2,0:2:2.98:22,3,0	0/0:20,1:15:13.82:0,14,89	0/0:22,0:23:12.78:0,13,95	0/1:4,0:4:22.78:23,0,40	0/0:1,0:14:18.33:0,18,53	0/0:4,0:18:22.40:0,22,65	0/1:11,2:13:12.62:78,0,13	0/0:4,0:19:20.33:0,20,59	1/1:6,0:6:8.61:74,9,0	1/1:4,2:6:3.01:32,3,0	1/1:6,0:6:6.85:53,7,0	0/1:6,7:13:9.94:103,0,10	1/1:4,0:4:6.01:56,6,0	1/1:2,9:11:3.01:32,3,0	1/1:6,2:8:8.12:90,8,0	0/1:4,9:13:31.17:109,0,31	0/1:2,3:5:16.06:54,0,16	1/1:5,1:6:5.69:43,6,0	1/1:0,3:3:6.01:62,6,0	1/1:14,0:14:12:112,12,0	0/1:5,0:5:17.93:26,0,18	1/1:4,3:7:3.01:32,3,0	1/1:3,1:4:4.25:35,4,0	0/1:3,4:7:7.12:26,0,7	1/1:2,1:3:3.89:29,4,0	1/1:5,6:11:3.26:60,3,0	0/1:4,0:4:11.13:43,0,11
chr10	10650458	.	T	TCTCTCTCC	1289.81	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=1.712;DP=416;FS=14.624;HRun=0;HaplotypeScore=108.9025;InbreedingCoeff=0.6344;MQ=70.02;MQ0=2;MQRankSum=-6.090;QD=20.80;ReadPosRankSum=-1.717;VQSLOD=1.5260;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:90.29:0,90,2315	0/0:4,0:4:3.35:0,3,38	0/0:25,0:17:45.15:0,45,947	0/0:32,0:22:17.35:0,17,812	0/0:5,0:5:8.97:0,9,91	1/1:3,9:17:8.92:260,9,0	1/1:27,0:27:44.16:522,44,0	0/0:22,0:22:54.09:0,54,829	1/1:14,0:14:33.08:639,33,0	0/0:8,0:8:9.50:0,10,157	0/0:6,0:6:12.01:0,12,162	0/0:13,0:13:8.51:0,9,68	0/0:18,0:18:20.75:0,21,295	0/0:10,0:10:17.31:0,17,185	0/0:21,0:21:9.48:0,9,103	0/0:17,0:17:0.67:0,1,239	0/0:15,0:15:18.02:0,18,199	0/0:8,0:8:20.51:0,21,273	0/0:18,0:18:45.11:0,45,717	0/0:14,0:14:32.99:0,33,588	0/0:24,0:23:48.06:0,48,751	0/0:11,0:11:12.01:0,12,146	0/0:9,0:9:13.94:0,14,291	0/0:7,0:7:8.52:0,9,104	0/0:6,0:6:14.96:0,15,219	0/0:11,0:11:23.75:0,24,386	0/0:18,0:18:32.94:0,33,350	0/1:4,0:4:9:9,0,80
chr10	10650468	.	C	CTCT	617.65	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=5.355;DP=415;FS=0.755;HRun=0;HaplotypeScore=97.6625;InbreedingCoeff=0.1291;MQ=71.86;MQ0=2;MQRankSum=-4.429;QD=3.91;ReadPosRankSum=1.471;VQSLOD=1.5045;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,99,1767	0/0:4,0:4:5.92:0,6,58	0/0:22,0:16:31.08:0,31,485	0/0:29,0:19:45.80:0,46,692	0/0:9,0:9:6:0,6,52	1/1:10,1:12:16.82:202,17,0	1/1:9,9:22:1.43:227,1,0	0/0:18,0:18:22.63:0,23,394	1/1:4,8:16:12.04:224,12,0	0/0:5,0:5:2.11:0,2,38	0/1:7,0:7:13.01:13,0,66	0/0:11,0:11:1.53:0,2,58	0/1:16,0:16:11.10:11,0,59	0/0:12,0:12:17.06:0,17,195	0/1:28,0:28:0.97:1,0,193	0/0:20,0:20:17.57:0,18,300	0/1:24,0:24:26.21:26,0,220	0/0:11,0:11:1.88:0,2,103	0/0:18,0:18:51.02:0,51,537	0/0:10,0:10:22.29:0,22,250	0/0:24,0:23:45.12:0,45,571	0/1:11,0:11:16.69:17,0,67	0/0:8,0:8:17.34:0,17,169	0/0:6,0:6:6.35:0,6,42	0/0:3,0:3:0.91:0,1,36	0/0:12,0:12:4.56:0,5,100	0/1:18,0:18:37.87:38,0,46	0/1:4,0:4:5.88:6,0,62
chr10	10650930	.	A	AT	15618.64	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-13.638;DP=713;FS=1.845;HRun=9;HaplotypeScore=77.1741;InbreedingCoeff=0.9309;MQ=71.08;MQ0=0;MQRankSum=-5.122;QD=25.69;ReadPosRankSum=1.763;VQSLOD=5.4909;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,15:19:15.89:386,16,0	1/1:2,13:15:7.04:306,7,0	0/0:18,0:18:40.88:0,41,323	0/0:17,0:17:26.96:0,27,257	1/1:4,26:32:34.77:793,35,0	0/0:3,0:30:48.88:0,49,144	0/0:2,0:17:30.55:0,31,90	1/1:12,36:49:99:1181,111,0	0/0:1,0:23:38.70:0,39,114	1/1:3,29:32:87.24:962,87,0	1/1:2,27:29:51.68:773,52,0	1/1:7,23:30:46.14:737,46,0	1/1:3,27:30:66.18:730,66,0	1/1:5,15:20:42.11:463,42,0	1/1:4,21:25:57.15:631,57,0	1/1:2,28:30:58.18:870,58,0	1/1:4,27:31:52.16:804,52,0	1/1:2,12:14:33.09:365,33,0	1/1:6,23:29:43.13:699,43,0	1/1:0,26:26:75.20:830,75,0	1/1:4,18:22:2.06:479,2,0	1/1:2,29:31:75.20:830,75,0	1/1:1,13:15:35.88:397,36,0	1/1:1,6:7:18.05:199,18,0	1/1:2,25:27:63.17:693,63,0	1/1:4,37:41:99:1204,111,0	1/1:6,24:28:61.96:801,62,0	1/1:5,18:22:45.10:488,45,0
chr10	10651254	.	CAAAGGAAAGG	C	21597.16	PASS	AB=0.673;AC=35;AF=0.625;AN=56;BaseQRankSum=-6.732;DP=780;FS=0.870;HRun=0;HaplotypeScore=246.3774;InbreedingCoeff=0.7977;MQ=70.97;MQ0=2;MQRankSum=-10.004;QD=39.41;ReadPosRankSum=4.171;VQSLOD=4.3778;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:15,20:34:41.41:744,0,41	1/1:4,10:14:24.08:725,24,0	0/0:33,0:29:16.21:0,16,289	0/0:46,0:34:27.09:0,27,805	1/1:13,27:40:48.16:1167,48,0	0/0:9,0:17:45:0,45,473	0/0:13,0:18:38.98:0,39,423	0/0:10,0:18:26.87:0,27,383	0/0:19,0:31:51.08:0,51,540	1/1:5,20:24:60.21:1647,60,0	1/1:5,20:26:48.16:1336,48,0	1/1:11,21:32:39.13:1179,39,0	1/1:11,25:36:45.15:1360,45,0	1/1:13,25:38:57.19:1650,57,0	1/1:8,32:40:66.18:1925,66,0	1/1:15,29:44:63.22:1877,63,0	1/1:17,14:30:18.11:630,18,0	0/1:11,8:19:1.50:85,0,2	0/0:15,0:18:21.04:0,21,219	0/0:7,0:27:63.11:0,63,724	0/0:6,0:20:24.06:0,24,285	1/1:5,24:29:45.15:1320,45,0	1/1:4,14:18:27.56:817,28,0	0/1:18,16:34:13.19:783,0,13	1/1:4,18:22:30.10:890,30,0	1/1:7,13:19:39.13:1105,39,0	1/1:12,27:38:63.13:1904,63,0	1/1:0,6:6:15.05:454,15,0
chr10	10651353	.	A	AAAAGGAAAAG	4304.17	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-0.121;DP=957;FS=13.293;HRun=0;HaplotypeScore=255.9891;InbreedingCoeff=0.9983;MQ=60.93;MQ0=13;MQRankSum=-8.004;QD=44.37;ReadPosRankSum=-0.127;VQSLOD=3.1588;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:47.69:0,48,2246	0/0:22,0:22:63.20:0,63,1769	0/0:84,0:36:27.63:0,28,725	0/0:96,0:22:25.70:0,26,499	0/0:35,0:35:93.23:0,93,2232	1/1:2,32:35:24.08:1127,24,0	1/1:17,0:19:45.15:1486,45,0	0/0:31,0:31:74.72:0,75,1812	1/1:3,39:42:32.95:1691,33,0	0/0:36,0:36:96.30:0,96,2656	0/0:22,0:22:57.16:0,57,1540	0/0:28,0:28:72.23:0,72,1933	0/0:27,0:27:81.19:0,81,2128	0/0:29,0:29:74.77:0,75,1886	0/0:36,0:36:87.28:0,87,2448	0/0:36,0:36:99:0,102,2738	0/0:34,0:34:57.28:0,57,2229	0/0:30,0:30:78.18:0,78,2215	0/0:20,0:20:57.15:0,57,1291	0/0:35,0:35:93.28:0,93,2733	0/0:22,0:22:63.21:0,63,1652	0/0:29,0:29:81.24:0,81,2126	0/0:25,0:25:72.24:0,72,2107	0/0:32,0:32:93.21:0,93,2485	0/0:33,0:33:93.29:0,93,2442	0/0:32,0:32:90.29:0,90,2538	0/0:29,0:28:72.17:0,72,2072	0/0:20,0:20:60.16:0,60,1541
chr10	10651362	.	AG	A	134.53	PASS	AB=0.741;AC=1;AF=0.018;AN=56;BaseQRankSum=5.892;DP=941;FS=0.000;HRun=2;HaplotypeScore=120.6176;InbreedingCoeff=-0.0195;MQ=60.33;MQ0=14;MQRankSum=-2.073;QD=6.73;ReadPosRankSum=-0.853;VQSLOD=0.2847;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:66.94:0,67,1335	0/0:22,0:22:63.21:0,63,943	0/0:65,0:27:40.21:0,40,637	0/0:88,2:23:11.16:0,11,387	0/0:34,0:34:99:0,99,1373	0/0:35,0:34:34.83:0,35,297	0/1:13,7:20:99:209,0,366	0/0:31,0:31:87.24:0,87,1253	0/0:33,0:33:30.97:0,31,147	0/0:36,0:36:99:0,105,1542	0/0:19,0:19:57.16:0,57,796	0/0:27,0:27:78.25:0,78,1136	0/0:29,0:29:87.24:0,87,1256	0/0:28,0:28:81.16:0,81,1169	0/0:31,0:31:93.29:0,93,1343	0/0:40,0:40:99:0,117,1672	0/0:36,0:36:93.30:0,93,1355	0/0:29,0:29:78.20:0,78,1162	0/0:24,0:24:72.20:0,72,1001	0/0:35,0:35:99:0,102,1521	0/0:22,0:22:63.21:0,63,937	0/0:36,0:36:99:0,105,1488	0/0:26,0:26:78.23:0,78,1111	0/0:36,0:36:99:0,108,1454	0/0:33,0:33:96.33:0,96,1434	0/0:31,0:31:93.31:0,93,1375	0/0:29,0:28:78.26:0,78,1164	0/0:22,0:22:66.20:0,66,964
chr10	10651383	.	AAAAGG	A	3669.34	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=9.109;DP=901;FS=0.983;HRun=0;HaplotypeScore=178.0785;InbreedingCoeff=0.9997;MQ=61.39;MQ0=6;MQRankSum=1.328;QD=33.98;ReadPosRankSum=-1.018;VQSLOD=3.1092;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:60.98:0,61,1891	0/0:19,0:19:45.15:0,45,1268	0/0:71,0:33:46.96:0,47,896	0/0:80,0:21:30.10:0,30,641	0/0:31,0:31:87.30:0,87,2480	0/0:30,0:29:51.17:0,51,1405	0/0:24,0:24:55.07:0,55,1277	1/1:10,21:31:57.17:987,57,0	0/0:27,0:27:44.92:0,45,1005	0/0:36,0:36:93.32:0,93,2565	0/0:14,0:14:42.14:0,42,1204	0/0:25,0:25:60.19:0,60,1544	0/0:31,0:31:84.29:0,84,2276	0/0:28,0:28:69.24:0,69,1961	0/0:32,0:32:75.26:0,75,2135	0/0:46,0:46:99:0,132,3716	0/0:36,0:36:96.32:0,96,2527	0/0:26,0:26:42.12:0,42,1039	1/1:11,11:22:33.08:566,33,0	1/1:7,25:32:75.26:1427,75,0	1/1:5,18:23:36.12:690,36,0	0/0:33,0:33:84.29:0,84,2432	0/0:28,0:28:60.21:0,60,1700	0/0:32,0:32:66.23:0,66,1832	0/0:28,0:28:69.24:0,69,1900	0/0:33,0:33:84.29:0,84,2358	0/0:29,0:28:63.22:0,63,1707	0/0:19,0:19:51.18:0,51,1470
chr10	10651554	.	AG	A	2886.35	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.617;DP=791;FS=1.416;HRun=2;HaplotypeScore=78.6978;InbreedingCoeff=0.9995;MQ=87.99;MQ0=0;MQRankSum=-3.446;QD=33.56;ReadPosRankSum=2.142;VQSLOD=3.9701;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:67,0:67:99:0,199,2896	0/0:12,0:12:36.12:0,36,539	0/0:28,0:28:80.97:0,81,1194	0/0:30,0:30:81.23:0,81,1149	0/0:48,0:48:99:0,121,1875	1/1:0,34:34:99:1282,99,0	1/1:1,24:25:66.21:857,66,0	0/0:30,0:30:84.28:0,84,1241	1/1:0,27:27:69.22:890,69,0	0/0:39,0:39:99:0,117,1719	0/0:11,0:11:33.11:0,33,494	0/0:28,0:28:84.28:0,84,1256	0/0:33,0:33:93.30:0,93,1371	0/0:29,0:29:87.26:0,87,1243	0/0:33,0:32:99:0,99,1462	0/0:42,0:42:99:0,123,1823	0/0:23,0:23:69.23:0,69,1021	0/0:9,0:9:27.09:0,27,401	0/0:20,0:20:60.16:0,60,821	0/0:28,0:28:84.25:0,84,1213	0/0:30,0:30:90.29:0,90,1327	0/0:23,0:23:63.14:0,63,901	0/0:22,0:22:66.19:0,66,930	0/0:28,0:28:81.22:0,81,1134	0/0:22,0:22:66.22:0,66,986	0/0:32,0:32:96.30:0,96,1384	0/0:23,0:23:69.22:0,69,1013	0/0:15,0:15:45.11:0,45,629
chr10	10651872	.	A	ATTT	4067.24	PASS	AB=0.550;AC=45;AF=0.804;AN=56;BaseQRankSum=0.940;DP=652;FS=0.878;HRun=9;HaplotypeScore=128.2238;InbreedingCoeff=0.2119;MQ=71.33;MQ0=1;MQRankSum=-4.232;QD=6.44;ReadPosRankSum=4.183;VQSLOD=-0.6246;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,0:22:41.60:310,42,0	1/1:2,0:9:7.48:16,7,0	0/0:10,0:10:27.04:0,27,310	0/0:10,0:9:12.45:0,12,134	0/1:6,0:34:28.44:28,0,40	1/1:2,22:25:54.18:1044,54,0	1/1:1,5:6:15.05:296,15,0	0/1:7,0:33:2.31:52,0,2	1/1:7,24:33:72.22:1362,72,0	0/1:6,0:25:8.53:24,0,9	1/1:1,0:31:34.89:75,35,0	1/1:4,0:29:24.92:54,25,0	1/1:2,0:21:19.58:43,20,0	1/1:1,0:21:21.18:45,21,0	1/1:5,0:37:3.72:45,4,0	1/1:2,0:28:27.41:59,27,0	1/1:1,0:16:14.95:32,15,0	1/1:1,0:16:20.24:51,20,0	0/1:4,0:26:8.27:28,0,8	1/1:4,0:33:38.05:124,38,0	1/1:1,0:19:22.43:48,22,0	0/1:3,0:17:15.62:16,0,18	0/1:3,0:24:9:47,0,9	1/1:2,0:13:13.71:29,14,0	1/1:4,0:32:33.20:89,33,0	0/1:5,0:28:24.03:24,0,76	1/1:2,0:37:38.56:91,39,0	1/1:4,0:16:10.44:36,10,0
chr10	10652270	.	TTTGG	T	2837.94	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=10.685;DP=802;FS=4.590;HRun=0;HaplotypeScore=128.3244;InbreedingCoeff=0.9908;MQ=66.38;MQ0=4;MQRankSum=1.129;QD=31.53;ReadPosRankSum=1.232;VQSLOD=3.6583;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:57:99:0,141,3384	0/0:13,0:13:30.10:0,30,738	0/0:38,0:27:36.08:0,36,803	0/0:27,0:22:19.98:0,20,640	0/0:28,0:28:66.21:0,66,1533	1/1:8,21:31:72.25:1190,72,0	1/1:7,18:25:48.16:796,48,0	0/0:35,0:35:60.18:0,60,1272	1/1:8,26:34:60.04:995,60,0	0/0:24,0:24:54.19:0,54,1297	0/0:21,0:21:45.12:0,45,983	0/0:27,0:27:66.21:0,66,1504	0/0:33,0:33:78.25:0,78,1863	0/0:27,0:27:54.15:0,54,1167	0/0:32,0:32:81.28:0,81,1948	0/0:28,0:28:78.25:0,78,1849	0/0:41,0:41:99:0,99,2161	0/0:25,0:25:63.22:0,63,1546	0/0:11,0:11:21.07:0,21,501	0/0:38,0:38:93.31:0,93,2200	0/0:36,0:36:90.27:0,90,2009	0/0:28,0:28:72.21:0,72,1619	0/0:34,0:34:84.25:0,84,1953	0/0:30,0:30:63.18:0,63,1490	0/0:15,0:14:33.10:0,33,763	0/0:28,0:28:69.23:0,69,1642	0/0:28,0:27:66.23:0,66,1583	0/0:8,0:8:15.05:0,15,369
chr10	10653919	.	A	ATT	5778.36	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=0.889;DP=525;FS=4.068;HRun=16;HaplotypeScore=113.6120;InbreedingCoeff=0.7279;MQ=61.68;MQ0=12;MQRankSum=-3.588;QD=12.59;ReadPosRankSum=-2.917;VQSLOD=3.0292;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:29:0.89:0,1,204	1/1:6,1:6:14.63:150,15,0	0/0:24,0:10:5.75:0,6,44	0/0:13,0:7:7.63:0,8,48	1/1:7,2:22:22.74:133,23,0	1/1:15,0:17:29.57:191,30,0	1/1:15,0:17:34.89:270,35,0	1/1:18,1:26:27.42:184,27,0	1/1:12,0:12:17.39:136,17,0	1/1:10,4:17:13.15:222,13,0	1/1:9,5:20:38.04:356,38,0	1/1:10,8:17:29.40:314,29,0	1/1:2,6:9:12.04:145,12,0	1/1:8,4:14:25.94:241,26,0	1/1:12,6:17:15.10:291,15,0	1/1:5,8:15:20.42:220,20,0	1/1:18,7:26:41.77:466,42,0	1/1:5,5:11:15.05:182,15,0	1/1:16,0:20:30.79:289,31,0	1/1:26,1:27:51.75:401,52,0	1/1:6,1:11:15:142,15,0	1/1:17,3:20:26.95:279,27,0	1/1:7,3:13:21.98:227,22,0	1/1:4,6:13:19.15:172,19,0	1/1:12,1:28:7.07:104,7,0	1/1:14,4:24:25.78:344,26,0	1/1:10,5:17:8.79:191,9,0	1/1:10,2:17:14.37:130,14,0
chr10	10653949	.	T	TC	493.80	PASS	AB=0.825;AC=6;AF=0.115;AN=52;BaseQRankSum=-0.292;DP=434;FS=16.576;HRun=1;HaplotypeScore=66.6490;InbreedingCoeff=0.6301;MQ=43.85;MQ0=18;MQRankSum=-4.072;QD=13.72;ReadPosRankSum=1.262;VQSLOD=1.4303;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:32:68.35:0,68,790	0/1:6,0:5:0.31:0,0,138	./.	./.	0/0:26,0:25:34.81:0,35,503	0/1:6,7:13:16:283,0,16	1/1:3,5:7:12.04:165,12,0	0/0:19,0:17:50.93:0,51,559	1/1:2,7:9:12.04:164,12,0	0/0:17,0:17:39.04:0,39,420	0/0:20,0:19:45.03:0,45,523	0/0:17,0:15:39.07:0,39,456	0/0:8,0:8:18.03:0,18,192	0/0:18,0:17:45.06:0,45,492	0/0:10,0:9:24.03:0,24,265	0/0:18,0:18:42.07:0,42,474	0/0:33,0:30:18.20:0,18,597	0/0:11,0:11:26.95:0,27,292	0/0:16,0:16:41.42:0,41,440	0/0:18,0:18:33.05:0,33,388	0/0:6,0:4:5.98:0,6,58	0/0:17,0:17:35.76:0,36,358	0/0:16,0:16:17.31:0,17,342	0/0:13,0:11:23.96:0,24,273	0/0:27,0:26:56.96:0,57,658	0/0:16,0:16:39.10:0,39,460	0/0:18,0:18:35.95:0,36,388	0/0:17,0:16:33.03:0,33,386
chr10	10655326	.	CT	C	783.08	PASS	AB=0.942;AC=10;AF=0.179;AN=56;BaseQRankSum=7.466;DP=473;FS=0.575;HRun=11;HaplotypeScore=49.9901;InbreedingCoeff=0.5109;MQ=66.73;MQ0=4;MQRankSum=-0.887;QD=9.91;ReadPosRankSum=0.429;VQSLOD=2.2555;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:48.11:0,48,504	0/0:8,0:8:21.05:0,21,224	0/1:15,0:11:6.89:7,0,117	0/0:13,0:8:5.23:0,5,74	0/0:30,0:30:57.89:0,58,745	1/1:1,23:24:62.93:517,63,0	1/1:1,6:7:17.98:148,18,0	0/0:32,0:33:78.02:0,78,808	1/1:2,13:15:29.96:246,30,0	0/0:28,0:27:72.17:0,72,761	0/0:24,1:25:41.50:0,42,638	0/0:14,0:14:36.07:0,36,370	0/0:20,0:20:48.11:0,48,505	0/1:9,1:10:0.55:1,0,194	0/0:11,0:11:27.05:0,27,280	0/0:18,0:17:45.11:0,45,480	0/0:21,0:21:57.09:0,57,587	0/0:11,1:12:2.43:0,2,231	0/0:21,0:19:45.11:0,45,474	0/0:24,0:24:66.11:0,66,678	0/0:9,0:9:24.05:0,24,248	0/1:2,0:2:0.94:1,0,27	0/1:5,1:6:9.61:10,0,113	0/0:3,0:3:3.01:0,3,32	0/0:29,0:29:69.17:0,69,736	0/0:15,0:15:6.66:0,7,265	0/0:34,0:33:74.25:0,74,826	0/0:6,0:6:12.01:0,12,119
chr10	10655851	.	TTTTTG	T	3809.55	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=11.206;DP=660;FS=2.247;HRun=0;HaplotypeScore=120.4869;InbreedingCoeff=0.9732;MQ=72.47;MQ0=1;MQRankSum=-4.934;QD=45.90;ReadPosRankSum=0.552;VQSLOD=3.9336;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:69.24:0,69,2059	0/0:6,0:6:15.05:0,15,448	0/0:17,0:17:32.87:0,33,832	0/0:15,0:14:35.86:0,36,865	0/0:35,0:35:93.32:0,93,2728	1/1:5,30:35:78.27:1548,78,0	1/1:4,20:24:54.19:1071,54,0	0/0:26,0:26:66.23:0,66,1903	1/1:2,22:24:60.21:1191,60,0	0/0:30,0:30:84.29:0,84,2498	0/0:20,0:20:54.19:0,54,1581	0/0:26,0:26:78.23:0,78,2220	0/0:29,0:29:84.27:0,84,2440	0/0:30,0:30:84.29:0,84,2444	0/0:26,0:26:69.24:0,69,2018	0/0:36,0:36:99:0,99,2915	0/0:33,0:33:90.31:0,90,2672	0/0:15,0:15:39.13:0,39,1163	0/0:22,0:22:51.18:0,51,1521	0/0:15,0:15:33.11:0,33,976	0/0:7,0:7:9.03:0,9,269	0/0:19,0:19:45.15:0,45,1342	0/0:20,0:20:57.20:0,57,1638	0/0:25,0:25:69.19:0,69,1990	0/0:21,0:21:60.21:0,60,1711	0/0:29,0:28:87.30:0,87,2597	0/0:39,0:38:99:0,105,3102	0/0:10,0:10:24.08:0,24,716
chr10	10656417	.	AT	A	13807.45	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-2.343;DP=601;FS=10.175;HRun=8;HaplotypeScore=59.5359;InbreedingCoeff=0.9960;MQ=74.90;MQ0=0;MQRankSum=-7.385;QD=24.01;ReadPosRankSum=3.947;VQSLOD=5.1497;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,25:27:72.12:695,72,0	1/1:1,8:9:21.03:203,21,0	0/0:14,0:14:30.09:0,30,358	0/0:12,0:12:26.88:0,27,278	1/1:3,37:40:92.85:846,93,0	1/1:3,23:26:57.04:541,57,0	1/1:2,12:14:30.05:290,30,0	1/1:7,25:32:75.08:713,75,0	1/1:2,21:23:57.09:550,57,0	1/1:1,22:23:66.10:637,66,0	1/1:3,19:22:54:509,54,0	1/1:2,24:26:66.11:637,66,0	1/1:0,22:22:63.10:608,63,0	1/1:2,20:22:57.09:550,57,0	1/1:2,38:40:99:1014,105,0	1/1:1,21:22:60.10:579,60,0	1/1:0,16:16:45.07:435,45,0	1/1:4,15:19:45.07:435,45,0	1/1:2,9:11:26.99:251,27,0	1/1:4,18:22:51.04:484,51,0	1/1:1,16:17:45.07:435,45,0	1/1:2,19:21:51.08:492,51,0	1/1:3,19:22:51.02:481,51,0	1/1:1,13:14:33.05:319,33,0	1/1:3,18:21:45.07:434,45,0	1/1:3,25:28:72.11:695,72,0	1/1:0,24:24:69.06:656,69,0	1/1:0,12:12:33.05:319,33,0
chr10	10656685	.	TG	T	624.44	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=3.368;DP=520;FS=6.525;HRun=2;HaplotypeScore=154.0554;InbreedingCoeff=0.8563;MQ=64.33;MQ0=4;MQRankSum=-2.290;QD=9.05;ReadPosRankSum=1.477;VQSLOD=1.2885;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:18.93:0,19,298	0/0:9,0:7:10.64:0,11,70	0/0:39,1:23:35.75:0,36,368	0/1:34,0:16:3.21:3,0,208	0/0:24,0:24:64.16:0,64,386	1/1:11,2:14:36.02:305,36,0	1/1:5,3:8:18.02:187,18,0	0/0:31,0:28:59.85:0,60,406	1/1:4,9:13:26.99:272,27,0	0/0:26,0:26:67.04:0,67,404	0/0:15,0:15:29.70:0,30,180	0/0:20,0:20:30.28:0,30,173	0/0:16,0:16:26.89:0,27,156	0/0:15,0:15:41.95:0,42,210	0/0:20,0:20:53.70:0,54,314	0/0:30,0:29:48.65:0,49,412	0/0:21,0:21:38.82:0,39,238	0/0:8,0:7:14.01:0,14,93	0/0:19,0:18:35.31:0,35,216	0/0:15,0:16:40.01:0,40,205	0/0:11,0:11:29.06:0,29,178	0/0:12,0:12:28.08:0,28,173	0/0:15,0:14:32.06:0,32,170	0/0:14,0:14:22.43:0,22,149	0/0:13,0:13:30.74:0,31,159	0/0:22,0:21:51.16:0,51,295	0/0:25,0:24:48.49:0,48,262	0/0:8,0:8:16.59:0,17,91
chr10	10656686	.	GGTTT	G	888.85	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=4.177;DP=517;FS=7.777;HRun=0;HaplotypeScore=174.3381;InbreedingCoeff=0.5449;MQ=64.07;MQ0=5;MQRankSum=-4.590;QD=10.97;ReadPosRankSum=-0.727;VQSLOD=2.1727;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:39.78:0,40,599	0/0:9,0:7:7.72:0,8,44	0/0:41,0:22:42.25:0,42,473	0/0:34,0:16:20.78:0,21,298	0/0:24,0:24:41.42:0,41,327	1/1:7,6:14:38.91:471,39,0	1/1:4,4:8:22.69:268,23,0	0/0:29,0:26:68.45:0,68,816	1/1:10,3:13:25.96:272,26,0	0/0:28,0:28:60.37:0,60,279	0/0:15,0:15:1.37:0,1,157	0/0:20,0:20:24.49:0,24,164	0/0:15,0:14:25.84:0,26,158	0/0:16,0:16:34.42:0,34,148	0/0:20,0:20:46.49:0,46,234	0/0:29,1:28:8.34:0,8,291	0/0:21,0:21:30.06:0,30,178	0/1:9,0:7:4.03:4,0,39	0/0:17,0:16:44.42:0,44,483	0/0:16,0:16:47.75:0,48,458	0/0:11,0:11:29.61:0,30,265	0/1:11,0:11:7.66:8,0,87	0/0:14,0:13:27.17:0,27,145	0/0:14,0:14:4.47:0,4,142	0/0:13,0:13:24.23:0,24,117	0/0:22,0:21:46.15:0,46,217	0/1:25,0:24:17.76:18,0,144	0/0:8,0:8:10.66:0,11,94
chr10	10656687	.	GTTT	G	6181.72	PASS	AB=0.736;AC=35;AF=0.625;AN=56;BaseQRankSum=-1.520;DP=579;FS=10.961;HRun=13;HaplotypeScore=155.7246;InbreedingCoeff=0.1219;MQ=60.84;MQ0=5;MQRankSum=-0.519;QD=13.56;ReadPosRankSum=7.106;VQSLOD=1.4159;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:25:36:0,36,497	1/1:8,5:9:15.04:181,15,0	0/1:38,0:21:4.38:4,0,137	0/0:33,0:16:12.53:0,13,121	1/1:15,13:26:19.44:462,19,0	1/1:14,0:14:3.95:63,4,0	0/1:8,0:8:0.63:24,0,1	0/0:12,0:27:36.71:0,37,192	0/0:14,0:14:0.45:0,0,48	1/1:9,19:28:45.69:697,46,0	0/1:10,5:17:7.43:276,0,7	1/1:10,14:24:4.34:265,4,0	0/1:10,8:16:16.95:211,0,17	0/1:9,11:20:17.32:435,0,17	1/1:19,5:24:42.61:522,43,0	1/1:15,16:30:22.71:478,23,0	1/1:13,12:23:16.88:411,17,0	0/1:7,3:7:10.50:71,0,11	0/1:4,1:16:10.79:11,0,79	0/0:5,0:17:7.45:0,7,60	0/1:5,0:11:6.81:24,0,7	1/1:10,3:13:19.07:222,19,0	1/1:8,7:15:1.30:367,1,0	0/1:9,7:16:24.18:97,0,24	1/1:9,7:15:25.04:348,25,0	0/1:11,15:24:21.01:473,0,21	1/1:14,14:27:19.31:415,19,0	0/1:6,4:10:69.86:124,0,70
chr10	10656697	.	T	TG	965.78	PASS	AB=0.917;AC=18;AF=0.321;AN=56;BaseQRankSum=-0.272;DP=634;FS=1.493;HRun=0;HaplotypeScore=163.9651;InbreedingCoeff=-0.4717;MQ=51.18;MQ0=11;MQRankSum=1.890;QD=2.46;ReadPosRankSum=0.812;VQSLOD=2.7478;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:25:47.53:0,48,290	0/1:11,1:8:21.17:21,0,24	0/1:44,0:15:8.16:8,0,122	0/0:40,0:9:11.96:0,12,89	0/1:25,3:27:59.83:130,0,60	0/0:19,0:19:15.60:0,16,111	0/0:14,0:12:21.46:0,21,83	0/0:31,0:28:58.83:0,59,381	0/0:19,0:18:26.18:0,26,110	0/1:29,4:32:35.16:35,0,199	0/1:18,1:19:69.88:74,0,70	0/1:26,1:26:31.25:31,0,43	0/1:17,0:15:20.12:20,0,51	0/1:25,1:25:73.93:74,0,103	0/1:18,8:26:22.06:229,0,22	0/0:29,0:27:12.33:0,12,100	0/1:21,4:23:54.46:54,0,59	0/1:9,0:6:10.84:11,0,14	0/0:23,0:21:45.63:0,46,267	0/0:26,0:26:64.06:0,64,409	0/1:8,1:9:15.47:15,0,87	0/1:12,1:13:40.19:70,0,40	0/1:16,3:18:66.08:66,0,92	0/0:13,0:12:6:0,6,53	0/1:20,2:21:65.38:74,0,65	0/1:25,1:24:91.23:91,0,100	0/1:24,3:24:42.09:76,0,42	0/1:8,2:10:44.09:44,0,63
chr10	10656698	.	TTTG	T	3632.13	PASS	AB=0.986;AC=35;AF=0.625;AN=56;BaseQRankSum=4.252;DP=626;FS=18.044;HRun=0;HaplotypeScore=163.6669;InbreedingCoeff=0.0769;MQ=51.06;MQ0=12;MQRankSum=-2.744;QD=7.26;ReadPosRankSum=6.731;VQSLOD=1.4834;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:25:33.42:33,0,194	1/1:12,0:8:14.55:84,15,0	0/1:43,0:14:10.98:11,0,60	0/0:40,0:9:8.07:0,8,43	1/1:27,1:26:22.99:240,23,0	1/1:18,0:18:29.52:186,30,0	1/1:14,0:12:27.41:150,27,0	0/0:30,0:27:45.11:0,45,236	1/1:20,0:19:25.34:133,25,0	0/1:33,0:32:30.80:260,0,31	1/1:18,0:18:8.59:250,9,0	1/1:26,1:26:12.18:174,12,0	0/1:14,3:15:31.01:190,0,31	0/1:25,0:24:44.13:214,0,44	1/1:24,1:25:12.09:197,12,0	1/1:27,2:27:6.04:272,6,0	1/1:26,0:24:8.87:183,9,0	0/1:9,0:6:33.62:34,0,44	0/0:21,0:20:2.57:0,3,125	0/0:26,0:26:8.88:0,9,243	0/0:9,0:9:8.44:0,8,47	1/1:12,0:12:6.32:116,6,0	0/1:19,0:18:19.19:208,0,19	0/1:13,0:12:35.53:49,0,36	1/1:21,0:20:24.15:203,24,0	0/1:26,0:24:58.48:157,0,58	0/1:28,0:25:2.20:240,0,2	0/1:10,0:10:46.24:46,0,53
chr10	10656704	.	TG	T	643.73	PASS	AB=0.967;AC=10;AF=0.179;AN=56;BaseQRankSum=5.225;DP=629;FS=2.253;HRun=1;HaplotypeScore=160.3723;InbreedingCoeff=0.4598;MQ=42.88;MQ0=15;MQRankSum=-4.173;QD=3.76;ReadPosRankSum=-1.457;VQSLOD=-0.2408;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:23:38.87:39,0,141	0/0:11,1:8:15.04:0,15,186	0/1:38,1:9:27.20:27,0,41	0/1:43,1:7:17.28:36,0,17	0/0:23,1:22:3.19:0,3,368	1/1:11,7:19:39.97:285,40,0	1/1:9,5:12:29.39:229,29,0	0/0:30,0:27:44.79:0,45,783	1/1:14,5:18:24.49:182,24,0	0/0:31,1:31:53.50:0,54,869	0/0:19,0:19:17.43:0,17,215	0/0:29,0:28:7.20:0,7,298	0/0:16,1:15:23.62:0,24,215	0/0:25,1:25:15.66:0,16,543	0/0:24,0:24:33.63:0,34,486	0/0:28,2:28:31.14:0,31,524	0/0:26,0:24:33.03:0,33,452	0/0:11,0:8:18.18:0,18,176	0/0:20,0:19:40.78:0,41,616	0/0:26,0:26:48.72:0,49,738	0/0:10,0:9:23.98:0,24,280	0/0:12,0:12:21.20:0,21,222	0/0:17,3:19:40.06:0,40,412	0/0:15,0:14:17.92:0,18,184	0/0:19,0:18:1.95:0,2,213	0/0:26,0:24:55.94:0,56,733	0/0:28,2:27:16.27:0,16,384	0/1:10,1:11:3.12:3,0,145
chr10	10656707	.	TTG	T	808.22	PASS	AB=1.000;AC=14;AF=0.250;AN=56;BaseQRankSum=3.814;DP=645;FS=1.688;HRun=0;HaplotypeScore=169.7313;InbreedingCoeff=0.2556;MQ=39.38;MQ0=17;MQRankSum=-2.739;QD=3.23;ReadPosRankSum=-2.459;VQSLOD=2.2484;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:24:0:0,0,352	0/0:12,0:8:15.48:0,15,171	0/0:39,0:7:1.48:0,1,42	0/1:44,0:7:7.56:8,0,17	0/1:29,0:26:35.89:36,0,282	1/1:12,7:19:37.88:344,38,0	1/1:13,1:12:23.82:249,24,0	0/0:28,0:25:45.26:0,45,861	1/1:17,3:19:13.03:224,13,0	0/0:36,0:35:76:0,76,822	0/1:21,0:21:14.90:15,0,147	0/0:28,0:26:25.28:0,25,274	0/0:16,0:14:30.01:0,30,214	0/0:27,0:26:24.91:0,25,424	0/0:24,1:25:34.80:0,35,299	0/0:29,0:27:18.56:0,19,456	0/0:29,0:27:31.77:0,32,356	0/0:12,0:9:5:0,5,114	0/0:21,0:20:49.09:0,49,775	0/0:25,0:25:59.19:0,59,934	0/0:8,0:7:18.06:0,18,285	0/1:14,0:14:2.75:3,0,152	0/0:20,0:19:41.84:0,42,374	0/0:14,0:13:18.03:0,18,189	0/1:20,0:19:30.30:30,0,183	0/0:26,0:24:44.54:0,45,577	0/1:32,0:29:51.21:51,0,322	0/1:11,0:11:10.67:11,0,181
chr10	10656737	.	C	CTTT	1108.41	PASS	AB=1.000;AC=11;AF=0.212;AN=52;BaseQRankSum=4.336;DP=551;FS=16.335;HRun=7;HaplotypeScore=144.4377;InbreedingCoeff=0.5139;MQ=33.29;MQ0=31;MQRankSum=-4.327;QD=8.03;ReadPosRankSum=-1.673;VQSLOD=-0.4558;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:20:19.10:0,19,318	0/0:11,0:9:8.69:0,9,122	./.	./.	0/0:33,0:30:11.72:0,12,402	0/0:16,0:16:14.85:0,15,171	0/0:21,0:18:26.85:0,27,297	1/1:14,9:20:30.05:537,30,0	0/0:20,0:18:24.04:0,24,281	0/0:29,0:26:36.89:0,37,553	0/0:15,0:15:4.88:0,5,218	0/0:22,0:20:11.51:0,12,199	0/0:15,0:13:23.40:0,23,284	0/0:23,0:22:20.13:0,20,358	0/1:26,0:26:22.81:23,0,302	0/0:28,0:26:23.54:0,24,446	0/1:24,0:21:17.92:18,0,296	0/1:15,0:10:4.17:4,0,186	1/1:13,1:13:8.99:111,9,0	1/1:15,9:27:29.96:445,30,0	1/1:5,2:6:6.49:125,6,0	0/0:19,0:17:19.65:0,20,298	0/0:21,0:19:31.10:0,31,387	0/0:12,0:8:2.58:0,3,40	0/0:14,0:13:7.91:0,8,156	0/0:21,0:20:36.17:0,36,469	0/0:32,0:29:47.77:0,48,693	0/0:9,0:9:2.11:0,2,151
chr10	10657101	.	G	GA	2502.07	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-8.478;DP=681;FS=1.069;HRun=0;HaplotypeScore=68.2149;InbreedingCoeff=0.9997;MQ=78.91;MQ0=0;MQRankSum=-0.122;QD=38.49;ReadPosRankSum=3.258;VQSLOD=3.9819;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:75.13:0,75,984	0/0:11,0:11:30.10:0,30,414	0/0:17,0:17:46.68:0,47,597	0/0:20,0:20:56.84:0,57,656	0/0:19,0:19:51.13:0,51,675	1/1:0,20:21:51.15:786,51,0	1/1:0,26:26:63.21:1000,63,0	0/0:37,0:37:99:0,99,1253	1/1:0,18:18:54.18:859,54,0	0/0:31,0:31:84.26:0,84,1150	0/0:22,0:22:63.18:0,63,852	0/0:31,0:31:90.29:0,90,1231	0/0:22,0:21:63.20:0,63,857	0/0:26,0:26:75.23:0,75,1006	0/0:26,0:26:78.25:0,78,1047	0/0:38,1:39:64.29:0,64,1414	0/0:26,0:26:66.20:0,66,891	0/0:21,0:21:60.18:0,60,811	0/0:21,0:21:57.16:0,57,746	0/0:27,0:27:75.21:0,75,990	0/0:39,0:38:99:0,105,1406	0/0:28,0:28:84.27:0,84,1149	0/0:24,0:24:66.19:0,66,898	0/0:29,0:29:87.29:0,87,1189	0/0:22,0:22:63.17:0,63,854	0/0:24,0:24:66.20:0,66,889	0/0:16,0:16:48.14:0,48,638	0/0:11,0:11:33.11:0,33,459
chr10	10657196	.	A	ATTTTTT	13474.53	PASS	AB=0.944;AC=53;AF=0.946;AN=56;BaseQRankSum=-0.721;DP=599;FS=2.652;HRun=17;HaplotypeScore=172.2544;InbreedingCoeff=0.5499;MQ=59.61;MQ0=4;MQRankSum=-1.038;QD=23.56;ReadPosRankSum=-1.562;VQSLOD=1.5131;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:26:30.57:568,31,0	1/1:8,0:8:10.59:241,11,0	0/0:27,0:16:8.18:0,8,84	0/1:16,0:9:5.42:5,0,35	1/1:39,0:39:45.73:823,46,0	1/1:24,0:24:27.09:572,27,0	1/1:15,0:20:26.09:496,26,0	1/1:36,0:35:36.11:915,36,0	1/1:19,0:19:23.44:430,23,0	1/1:27,3:28:33.09:639,33,0	1/1:24,0:24:18.06:442,18,0	1/1:25,0:24:27.09:692,27,0	1/1:19,0:16:18.06:422,18,0	1/1:26,0:25:24.18:562,24,0	1/1:23,0:23:36.46:708,36,0	1/1:25,0:24:23.11:496,23,0	1/1:16,0:15:19.79:348,20,0	1/1:9,0:9:15.05:361,15,0	1/1:22,0:22:42.07:811,42,0	1/1:28,0:28:30.68:614,31,0	1/1:11,0:10:3.01:50,3,0	1/1:17,0:17:26.09:537,26,0	1/1:20,0:20:23.58:525,24,0	1/1:12,0:12:15.52:370,16,0	1/1:14,2:18:20.10:396,20,0	1/1:24,0:22:24.08:628,24,0	1/1:16,0:16:24.08:631,24,0	1/1:13,0:12:9.03:190,9,0
chr10	10657404	.	C	CT	28766.93	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-9.932;DP=797;FS=0.445;HRun=0;HaplotypeScore=73.8533;InbreedingCoeff=0.9991;MQ=88.37;MQ0=0;MQRankSum=-8.743;QD=40.35;ReadPosRankSum=6.081;VQSLOD=4.9965;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:78.25:0,78,1073	1/1:0,8:8:24.08:382,24,0	0/0:29,0:29:70.38:0,70,950	0/0:29,0:29:65.93:0,66,789	1/1:1,19:20:51.17:803,51,0	1/1:0,22:22:57.13:879,57,0	1/1:0,23:23:57.19:908,57,0	1/1:2,45:47:99:1941,135,0	1/1:1,24:25:60.20:956,60,0	1/1:0,27:27:72.17:1034,72,0	1/1:0,25:25:72.18:1102,72,0	1/1:0,31:30:69.24:1101,69,0	1/1:2,36:37:90.17:1429,90,0	1/1:0,28:28:78.13:1243,78,0	1/1:2,52:55:99:2192,138,0	1/1:1,33:34:90.31:1432,90,0	1/1:0,36:36:99:1579,99,0	1/1:1,15:16:33.11:526,33,0	1/1:0,25:25:72.23:1114,72,0	1/1:0,23:23:66.06:956,66,0	1/1:0,63:63:99:2490,157,0	1/1:0,20:20:45:657,45,0	1/1:0,23:23:60.20:958,60,0	1/1:1,22:23:54.18:862,54,0	1/1:0,22:22:60.20:958,60,0	1/1:0,26:26:78.23:1193,78,0	1/1:1,41:42:99:1546,99,0	1/1:0,11:11:33.11:525,33,0
chr10	10658380	.	AGGCTG	A	30121.33	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=11.182;DP=769;FS=0.764;HRun=0;HaplotypeScore=165.4067;InbreedingCoeff=0.9980;MQ=79.53;MQ0=0;MQRankSum=-9.418;QD=46.84;ReadPosRankSum=3.131;VQSLOD=5.0402;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,99,2937	1/1:1,16:17:42.10:838,42,0	0/0:24,0:24:72.25:0,72,2069	0/0:22,0:22:56.51:0,57,1584	0/0:24,0:24:72.25:0,72,2167	1/1:2,25:27:57.20:1195,57,0	1/1:2,16:18:36.08:680,36,0	1/1:10,25:35:75.21:1402,75,0	1/1:1,32:33:78.27:1635,78,0	1/1:2,23:25:69.19:1291,69,0	1/1:0,15:15:42.10:838,42,0	1/1:5,34:39:93.32:1944,93,0	1/1:3,37:40:90:1889,90,0	1/1:0,32:32:72.17:1468,72,0	1/1:2,39:41:87.30:1826,87,0	1/1:2,27:29:75.26:1574,75,0	1/1:2,31:33:81.28:1701,81,0	1/1:2,16:18:36.12:756,36,0	1/1:6,20:25:60.17:1082,60,0	1/1:2,25:27:69.11:1319,69,0	1/1:3,51:54:99:2370,117,0	1/1:2,15:17:36.12:755,36,0	1/1:0,23:23:45.63:944,46,0	1/1:1,19:20:51.18:1071,51,0	0/0:21,0:21:63.22:0,63,1939	1/1:6,29:35:84.26:1591,84,0	1/1:3,30:33:75.26:1574,75,0	1/1:0,6:6:18.06:378,18,0
chr10	10659434	.	C	CT	2248.30	PASS	AB=0.647;AC=13;AF=0.232;AN=56;BaseQRankSum=-3.576;DP=560;FS=6.392;HRun=10;HaplotypeScore=61.0502;InbreedingCoeff=0.8690;MQ=68.70;MQ0=2;MQRankSum=1.007;QD=17.29;ReadPosRankSum=-3.322;VQSLOD=2.9050;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:32.92:0,33,267	0/0:10,0:10:23.97:0,24,197	0/0:18,0:14:14.63:0,15,114	0/0:17,0:12:4.77:0,5,30	0/0:25,0:27:46.93:0,47,521	1/1:3,12:17:35.76:335,36,0	0/1:5,6:11:3.28:158,0,3	1/1:13,23:36:66.15:691,66,0	1/1:6,3:8:11.99:115,12,0	0/0:22,1:23:21.51:0,22,372	0/0:14,0:14:5.16:0,5,215	0/0:29,0:29:57.49:0,57,509	0/0:22,0:22:50.91:0,51,417	0/0:16,0:16:38.90:0,39,314	0/0:27,0:27:59.90:0,60,492	0/0:24,0:24:55.93:0,56,449	0/0:24,0:25:61.93:0,62,497	0/0:31,0:31:77.69:0,78,622	1/1:10,16:27:26.27:449,26,0	1/1:3,20:23:50.49:514,50,0	1/1:0,6:7:17.88:174,18,0	0/0:11,0:11:17.39:0,17,134	0/0:20,0:20:38.42:0,38,301	0/0:10,0:11:32:0,32,252	0/0:27,0:27:53.88:0,54,443	0/0:19,0:19:47.93:0,48,394	0/0:32,0:32:40.16:0,40,528	0/0:9,0:9:11.98:0,12,99
chr10	10659725	.	G	GC	5584.14	PASS	AC=44;AF=0.880;AN=50;BaseQRankSum=3.843;DP=279;FS=13.306;HRun=1;HaplotypeScore=52.1647;InbreedingCoeff=0.7237;MQ=44.50;MQ0=27;MQRankSum=-7.077;QD=33.24;ReadPosRankSum=-0.109;VQSLOD=3.0010;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,102,1302	1/1:0,7:6:18.04:214,18,0	0/0:40,0:5:5.05:0,5,43	0/0:35,0:5:12.04:0,12,153	1/1:1,3:4:9.03:132,9,0	1/1:2,5:7:15.05:222,15,0	1/1:3,10:13:36.11:507,36,0	1/1:1,9:10:21.07:313,21,0	1/1:0,4:4:12.03:159,12,0	./.	./.	1/1:1,8:9:24.08:343,24,0	1/1:1,8:9:24.08:354,24,0	1/1:0,11:11:23.65:297,24,0	1/1:0,7:7:12.04:175,12,0	1/1:0,11:11:27.09:399,27,0	1/1:1,9:10:23.11:303,23,0	1/1:1,8:9:23.94:346,24,0	1/1:8,6:9:23.29:312,23,0	1/1:4,1:5:6.01:70,6,0	./.	1/1:0,4:3:8.91:84,9,0	1/1:0,1:1:3.01:45,3,0	1/1:1,4:5:12.04:178,12,0	1/1:0,5:5:15.04:200,15,0	1/1:0,10:10:27.09:395,27,0	1/1:0,12:11:33.11:489,33,0	1/1:0,1:1:3.01:45,3,0
chr10	10659728	.	A	AGCAAGC	12258.47	PASS	AC=46;AF=0.920;AN=50;BaseQRankSum=7.110;DP=333;FS=30.535;HRun=0;HaplotypeScore=89.2690;InbreedingCoeff=0.6207;MQ=41.18;MQ0=27;MQRankSum=-8.103;QD=46.97;ReadPosRankSum=-1.996;VQSLOD=2.7630;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:90.31:0,90,2053	1/1:4,5:8:21.07:584,21,0	1/1:41,0:5:2.84:14,3,0	0/0:35,0:5:5.81:0,6,66	1/1:8,1:9:8.99:227,9,0	1/1:5,2:7:9.03:245,9,0	1/1:6,5:11:15.05:520,15,0	1/1:12,1:13:15.01:361,15,0	1/1:4,3:7:15.05:500,15,0	1/1:5,0:5:12.02:271,12,0	./.	1/1:8,4:12:27.07:744,27,0	1/1:5,4:9:21.04:539,21,0	1/1:6,8:15:30.10:898,30,0	1/1:7,6:13:24.08:733,24,0	1/1:5,9:14:27.09:886,27,0	1/1:4,6:10:24.08:735,24,0	1/1:4,6:10:27.09:853,27,0	1/1:13,5:14:30.10:886,30,0	1/1:4,1:5:3.01:104,3,0	./.	1/1:4,2:6:15.05:436,15,0	./.	1/1:4,1:5:6.02:155,6,0	1/1:3,5:8:21.07:616,21,0	1/1:13,5:18:33.11:1026,33,0	1/1:7,6:12:33.06:821,33,0	1/1:1,0:1:3.01:105,3,0
chr10	10660001	.	CAGG	C	2668.39	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=10.618;DP=809;FS=1.070;HRun=0;HaplotypeScore=111.4259;InbreedingCoeff=0.9997;MQ=73.70;MQ0=0;MQRankSum=-2.966;QD=39.24;ReadPosRankSum=2.917;VQSLOD=4.9722;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,99,2240	0/0:10,0:10:30.10:0,30,618	0/0:18,0:18:46.53:0,47,831	0/0:34,0:34:99:0,102,2067	0/0:30,0:30:75.24:0,75,1598	1/1:0,18:18:51.17:869,51,0	1/1:1,14:15:36.12:613,36,0	0/0:35,0:35:96.30:0,96,1982	1/1:1,34:35:78.27:1329,78,0	0/0:30,0:30:87.29:0,87,1939	0/0:21,0:21:57.18:0,57,1242	0/0:36,0:36:99:0,102,2226	0/0:36,0:36:99:0,105,2356	0/0:39,0:39:99:0,111,2425	0/0:56,0:56:99:0,166,3616	0/0:30,0:30:90.31:0,90,2039	0/0:29,0:29:87.28:0,87,1938	0/0:24,0:24:69.21:0,69,1455	0/0:21,0:21:60.21:0,60,1337	0/0:28,0:28:84.28:0,84,1893	0/0:60,0:60:99:0,181,3821	0/0:31,0:31:68.69:0,69,1358	0/0:17,0:17:48.15:0,48,1047	0/0:28,0:28:84.28:0,84,1850	0/0:24,0:24:72.23:0,72,1598	0/0:39,0:39:99:0,111,2515	0/0:16,0:16:42.13:0,42,923	0/0:14,0:14:42.14:0,42,965
chr10	10664783	.	GTT	G	2088.74	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=5.302;DP=665;FS=0.000;HRun=11;HaplotypeScore=98.4778;InbreedingCoeff=0.9305;MQ=69.07;MQ0=3;MQRankSum=1.358;QD=22.22;ReadPosRankSum=-0.533;VQSLOD=3.0465;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:31:75.11:0,75,1020	0/0:11,0:12:30.06:0,30,423	0/0:20,0:16:28.88:0,29,379	0/0:25,0:21:12.46:0,12,387	0/0:31,0:33:77.60:0,78,1107	0/0:7,0:24:50.93:0,51,199	0/0:4,1:17:1.26:0,1,85	1/1:10,22:31:60.10:638,60,0	0/0:1,0:18:37.31:0,37,128	0/0:22,0:22:60.20:0,60,900	0/0:19,0:19:50.60:0,51,681	0/0:21,0:21:51.17:0,51,778	0/0:23,0:24:50.52:0,51,645	0/0:23,0:23:60.18:0,60,862	0/0:32,0:33:82.40:0,82,1072	0/0:29,0:31:80.74:0,81,1158	0/0:31,0:33:89.22:0,89,1254	0/0:22,0:21:51.13:0,51,757	1/1:3,14:16:39.06:413,39,0	1/1:2,25:27:75.10:783,75,0	1/1:3,15:18:39.08:414,39,0	0/0:22,0:25:59.66:0,60,830	0/0:24,1:25:34.27:0,34,907	0/0:11,0:11:33.07:0,33,481	0/0:28,0:28:60.11:0,60,811	0/0:30,0:32:90.29:0,90,1307	0/0:32,0:33:83.70:0,84,1165	0/0:8,0:8:18.06:0,18,277
chr10	10664809	.	GAA	G	3636.63	PASS	AB=0.801;AC=21;AF=0.375;AN=56;BaseQRankSum=15.207;DP=777;FS=1.076;HRun=2;HaplotypeScore=167.6799;InbreedingCoeff=-0.5983;MQ=62.12;MQ0=8;MQRankSum=-11.411;QD=6.87;ReadPosRankSum=-2.600;VQSLOD=-0.6630;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:39.17:0,39,1528	0/1:10,4:14:99:102,0,565	0/0:47,0:27:77.11:0,77,1246	0/0:61,0:35:18.80:0,19,940	0/0:31,0:31:89.93:0,90,1565	0/1:18,2:20:13.45:13,0,1028	0/1:15,6:19:99:112,0,848	0/1:29,8:36:99:127,0,1376	0/1:20,5:25:99:116,0,1129	0/1:24,8:32:99:239,0,1186	0/1:20,7:27:99:240,0,1065	0/1:15,8:23:99:207,0,782	0/1:14,9:24:99:346,0,472	0/1:20,8:28:99:262,0,956	0/1:19,9:28:99:244,0,1070	0/1:23,10:33:99:324,0,1236	0/1:24,6:30:99:135,0,1303	0/1:18,5:22:99:134,0,851	0/1:15,1:16:40.53:41,0,805	0/1:30,7:37:99:194,0,1614	0/1:11,5:17:99:165,0,563	0/1:25,11:36:99:323,0,1353	0/0:19,0:19:36.38:0,36,1057	0/1:10,5:16:60.68:61,0,426	0/0:22,0:22:57.13:0,57,981	0/0:25,0:25:41.91:0,42,1403	0/1:27,9:35:99:229,0,1454	0/1:5,1:6:21.61:22,0,287
chr10	10664811	.	A	ATTTGGTTTGGTTTGG	24639.01	PASS	AB=0.887;AC=51;AF=0.911;AN=56;BaseQRankSum=0.213;DP=821;FS=0.000;HRun=0;HaplotypeScore=369.2695;InbreedingCoeff=0.2788;MQ=61.18;MQ0=7;MQRankSum=-2.341;QD=31.79;ReadPosRankSum=0.225;VQSLOD=2.7317;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:47:34.86:102,0,35	1/1:15,0:15:15.05:433,15,0	0/0:45,0:27:15.01:0,15,216	0/1:61,0:35:18.88:19,0,64	1/1:21,0:36:27.09:757,27,0	1/1:21,0:21:18.05:580,18,0	1/1:24,0:22:24.03:583,24,0	1/1:39,0:38:48.15:1507,48,0	1/1:25,0:25:18.06:617,18,0	1/1:31,0:31:42.09:1606,42,0	1/1:30,0:30:41.14:1145,41,0	1/1:22,0:22:27.09:1193,27,0	1/1:21,0:21:39.11:1819,39,0	1/1:28,0:28:27.09:1109,27,0	1/1:32,0:32:45.07:1930,45,0	1/1:34,0:34:39.13:1497,39,0	1/1:32,0:32:36.12:1178,36,0	1/1:25,0:24:15.05:785,15,0	1/1:18,0:17:8.06:203,8,0	1/1:38,0:38:42.13:1189,42,0	0/1:17,0:17:26.62:529,0,27	1/1:39,0:39:48.14:1671,48,0	1/1:18,0:19:15.03:374,15,0	1/1:17,0:17:21.07:718,21,0	1/1:16,0:26:21.07:575,21,0	1/1:24,4:37:30.54:1006,31,0	1/1:34,0:33:30.09:1328,30,0	1/1:6,0:6:3.01:186,3,0
chr10	10664872	.	A	AC	2031.61	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-3.195;DP=579;FS=0.546;HRun=0;HaplotypeScore=133.7157;InbreedingCoeff=0.9990;MQ=74.18;MQ0=0;MQRankSum=-1.313;QD=39.84;ReadPosRankSum=-0.053;VQSLOD=2.9254;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:90.29:0,90,1240	0/0:9,0:9:27.09:0,27,350	0/0:28,0:28:84.27:0,84,1128	0/0:25,0:25:66.11:0,66,852	0/0:17,0:17:36.12:0,36,466	1/1:1,13:13:39.13:582,39,0	1/1:0,16:16:48.16:711,48,0	0/0:32,0:32:90.27:0,90,1200	1/1:0,21:21:60.20:882,60,0	0/0:28,0:28:81.23:0,81,1032	0/0:13,0:13:36.12:0,36,467	0/0:19,0:19:57.05:0,57,680	0/0:19,0:19:54.13:0,54,680	0/0:15,0:15:45.15:0,45,581	0/0:29,0:29:78.15:0,78,959	0/0:27,0:27:81.22:0,81,1028	0/0:21,0:21:57.19:0,57,739	0/0:19,0:18:54.13:0,54,682	0/0:11,0:11:33.11:0,33,461	0/0:23,0:23:63.20:0,63,862	0/0:18,0:18:51.17:0,51,712	0/0:27,0:27:78.25:0,78,1006	0/0:13,0:13:39.13:0,39,506	0/0:20,0:20:48.10:0,48,603	0/0:16,0:16:39.13:0,39,505	0/0:24,0:24:59.30:0,59,797	0/0:27,0:27:75.24:0,75,966	0/0:9,0:9:27.09:0,27,350
chr10	10665230	.	TTCTGTTGTGAGTAA	T	4732.21	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=10.026;DP=733;FS=0.000;HRun=0;HaplotypeScore=279.0755;InbreedingCoeff=0.9976;MQ=81.27;MQ0=0;MQRankSum=-10.363;QD=87.63;ReadPosRankSum=1.651;VQSLOD=3.8993;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:72.21:0,72,4532	0/0:8,0:8:24.08:0,24,1685	0/0:24,0:24:61.45:0,61,3114	0/0:18,0:18:48.13:0,48,2607	0/0:29,0:29:87.30:0,87,5861	1/1:4,23:27:51.17:2165,51,0	1/1:2,7:9:21.07:908,21,0	0/0:34,0:34:99:0,102,5960	1/1:3,15:18:42.14:1659,42,0	0/0:37,0:37:99:0,111,7720	0/0:29,0:29:84.29:0,84,5354	0/0:44,0:44:99:0,132,8376	0/0:24,0:24:72.25:0,72,4699	0/0:30,0:30:87.30:0,87,5409	0/0:39,0:39:99:0,117,7883	0/0:28,0:28:84.29:0,84,5692	0/0:21,0:21:63.19:0,63,3979	0/0:12,0:12:36.12:0,36,2532	0/0:26,0:26:78.27:0,78,5023	0/0:33,0:33:96.33:0,96,6339	0/0:18,0:18:54.19:0,54,3305	0/0:30,0:30:90.30:0,90,5960	0/0:31,0:31:93.32:0,93,6300	0/0:27,0:27:81.28:0,81,5265	0/0:33,0:33:96.33:0,96,6086	0/0:30,0:30:87.30:0,87,6069	0/0:40,0:39:99:0,120,7678	0/0:10,0:10:30.10:0,30,1475
chr10	10665950	.	AAAGAGTTACTCATTT	A	5427.81	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=10.517;DP=742;FS=2.884;HRun=0;HaplotypeScore=297.3750;InbreedingCoeff=0.9992;MQ=85.43;MQ0=0;MQRankSum=-10.692;QD=87.55;ReadPosRankSum=3.673;VQSLOD=4.4974;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,114,7668	0/0:18,0:18:54.19:0,54,3767	0/0:30,0:30:78.27:0,78,4440	0/0:18,0:18:48.16:0,48,2585	0/0:31,0:31:84.20:0,84,5588	1/1:3,18:21:51.17:2241,51,0	1/1:9,9:18:24.08:1062,24,0	0/0:38,0:38:99:0,114,7326	1/1:5,18:23:48.16:2124,48,0	0/0:34,0:34:96.32:0,96,6695	0/0:19,0:19:48.16:0,48,3429	0/0:28,0:28:75.26:0,75,5146	0/0:41,0:41:99:0,114,7784	0/0:30,0:30:84.29:0,84,5790	0/0:33,0:33:93.32:0,93,6111	0/0:39,0:39:99:0,111,7786	0/0:23,0:23:69.22:0,69,4362	0/0:18,0:18:51.15:0,51,3575	0/0:22,0:22:63.22:0,63,4321	0/0:23,0:23:66.23:0,66,4568	0/0:29,0:29:84.27:0,84,5563	0/0:24,0:24:72.25:0,72,5200	0/0:13,0:13:39.13:0,39,2732	0/0:27,0:27:78.25:0,78,5531	0/0:30,0:30:90.31:0,90,6394	0/0:31,0:31:93.32:0,93,6439	0/0:28,0:28:81.28:0,81,5672	0/0:15,0:15:45.15:0,45,3093
chr10	10666554	.	T	TGGGG	1531.69	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=3.349;DP=693;FS=3.644;HRun=7;HaplotypeScore=115.2948;InbreedingCoeff=0.9777;MQ=76.71;MQ0=0;MQRankSum=-5.964;QD=23.21;ReadPosRankSum=-3.056;VQSLOD=0.0192;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:84.26:0,84,1310	0/0:14,0:14:42.14:0,42,647	0/0:25,0:25:51.54:0,52,746	0/0:17,0:16:38.85:0,39,545	0/0:30,0:30:81.24:0,81,1243	1/1:11,5:24:39.09:757,39,0	1/1:7,7:17:30.10:670,30,0	0/0:37,0:37:96.30:0,96,1478	1/1:6,15:25:12.04:244,12,0	0/0:37,0:37:99:0,105,1621	0/0:19,0:19:45.11:0,45,681	0/0:26,0:26:69.21:0,69,1075	0/0:27,0:27:81.28:0,81,1261	0/0:21,0:21:63.21:0,63,985	0/0:43,0:43:99:0,126,1947	0/0:29,0:28:81.24:0,81,1227	0/0:41,0:41:99:0,108,1642	0/0:24,0:24:69.21:0,69,1053	0/0:17,0:17:39.12:0,39,610	0/0:31,0:31:84.71:0,85,1266	0/0:14,0:14:39.08:0,39,562	0/0:24,0:24:66.19:0,66,1010	0/0:20,0:20:54.17:0,54,844	0/0:25,0:25:57.16:0,57,892	0/0:16,0:16:48.16:0,48,744	0/0:28,0:28:78.24:0,78,1197	0/0:26,0:26:63.18:0,63,983	0/0:4,0:4:12.04:0,12,188
chr10	10668396	.	C	CTCTT	43652.44	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-0.219;DP=762;FS=0.000;HRun=0;HaplotypeScore=137.0449;InbreedingCoeff=0.9917;MQ=74.09;MQ0=0;MQRankSum=-8.788;QD=59.88;ReadPosRankSum=4.751;VQSLOD=6.5984;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,33:37:84.29:2190,84,0	1/1:1,11:13:33.07:785,33,0	0/0:18,0:18:45.15:0,45,810	0/0:15,0:15:36.12:0,36,617	1/1:2,26:29:72.12:1660,72,0	1/1:1,24:25:57.15:1428,57,0	1/1:1,18:20:48.16:1233,48,0	1/1:11,26:39:93.31:2266,93,0	1/1:2,27:29:63.22:1673,63,0	1/1:5,34:39:99:2665,114,0	1/1:4,20:25:63.17:1515,63,0	1/1:3,30:35:81.28:2127,81,0	1/1:1,28:30:51.18:1353,51,0	1/1:3,32:38:84.29:2214,84,0	1/1:0,35:36:90.31:2358,90,0	1/1:2,30:32:75.26:1993,75,0	1/1:1,25:26:57.20:1515,57,0	1/1:3,20:24:54.19:1412,54,0	1/1:5,18:25:69.22:1628,69,0	1/1:1,22:26:72.25:1865,72,0	1/1:3,13:19:45.15:1179,45,0	1/1:3,23:26:66.23:1734,66,0	1/1:3,19:23:48.16:1278,48,0	1/1:1,28:29:60.21:1599,60,0	1/1:3,18:21:45.63:1151,46,0	1/1:7,31:38:99:2646,105,0	1/1:6,28:35:71.94:1808,72,0	1/1:3,5:8:15.05:378,15,0
chr10	10671781	.	TGG	T	2427.66	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.709;DP=768;FS=0.509;HRun=3;HaplotypeScore=88.0303;InbreedingCoeff=0.9999;MQ=60.56;MQ0=1;MQRankSum=0.178;QD=35.18;ReadPosRankSum=2.121;VQSLOD=3.3799;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,123,2299	0/0:14,0:14:42.12:0,42,746	0/0:35,0:20:57.19:0,57,1046	0/0:36,0:21:54.15:0,54,967	0/0:23,0:23:66.23:0,66,1275	1/1:0,29:29:78.26:1193,78,0	1/1:0,20:20:48.16:735,48,0	0/0:28,0:28:81.28:0,81,1542	1/1:0,20:20:42.14:642,42,0	0/0:26,0:26:78.27:0,78,1494	0/0:19,0:19:57.18:0,57,1022	0/0:28,0:28:81.20:0,81,1452	0/0:35,0:35:99:0,105,2019	0/0:25,0:24:63.16:0,63,1141	0/0:41,0:41:99:0,123,2207	0/0:36,0:36:99:0,105,2019	0/0:42,0:42:99:0,120,2141	0/0:15,0:15:45.15:0,45,869	0/0:15,0:15:42.14:0,42,801	0/0:27,0:27:81.24:0,81,1465	0/0:38,0:38:99:0,114,2089	0/0:17,0:17:51.16:0,51,952	0/0:14,0:14:42.14:0,42,811	0/0:39,0:39:99:0,111,2134	0/0:23,0:23:69.23:0,69,1294	0/0:33,0:33:99:0,99,1886	0/0:37,0:37:99:0,108,1997	0/0:11,0:11:33.11:0,33,637
chr10	10671907	.	A	AACACACAC	25518.63	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-2.472;DP=767;FS=8.215;HRun=0;HaplotypeScore=182.9336;InbreedingCoeff=0.8717;MQ=51.46;MQ0=18;MQRankSum=-3.813;QD=39.50;ReadPosRankSum=3.872;VQSLOD=3.5990;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:30:9:111,9,0	1/1:9,8:21:21.07:801,21,0	0/0:66,0:21:14.98:0,15,236	0/0:55,0:31:20.92:0,21,320	1/1:5,14:24:42.14:1357,42,0	1/1:15,2:31:21.07:753,21,0	1/1:12,0:22:15.05:417,15,0	1/1:17,0:32:61.86:1243,62,0	1/1:13,2:25:24.04:795,24,0	1/1:11,7:26:48.14:1073,48,0	1/1:9,11:24:24.08:936,24,0	1/1:7,13:26:41.88:1619,42,0	1/1:12,9:25:30.09:1071,30,0	1/1:15,14:29:26.33:1120,26,0	1/1:8,14:27:45.13:1529,45,0	1/1:8,16:28:30.09:1147,30,0	1/1:13,7:22:24.08:859,24,0	1/1:3,4:9:9.03:375,9,0	1/1:6,2:12:18.06:438,18,0	1/1:15,7:31:21.07:753,21,0	1/1:7,3:13:9.03:313,9,0	1/1:8,12:23:36.12:1376,36,0	1/1:5,11:21:36.12:1253,36,0	1/1:9,12:25:21.04:592,21,0	1/1:13,10:28:33.11:1293,33,0	1/1:12,15:29:44.76:1525,45,0	1/1:15,23:43:60.21:2331,60,0	1/1:4,3:9:12.04:438,12,0
chr10	10674119	.	CAT	C	19640.36	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=0.219;DP=610;FS=2.304;HRun=0;HaplotypeScore=84.6886;InbreedingCoeff=0.9992;MQ=82.56;MQ0=3;MQRankSum=-8.017;QD=37.41;ReadPosRankSum=5.538;VQSLOD=6.5338;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,117,2062	1/1:0,12:12:33:486,33,0	0/0:24,0:25:69.15:0,69,1123	0/0:20,0:20:48.16:0,48,824	1/1:0,24:24:66.22:972,66,0	1/1:0,21:21:51.17:751,51,0	1/1:1,20:21:60.20:884,60,0	1/1:2,38:40:99:1635,114,0	1/1:0,19:19:48.16:707,48,0	1/1:0,21:21:60.20:880,60,0	1/1:0,18:18:45.15:663,45,0	1/1:0,19:19:39.13:574,39,0	1/1:0,21:21:51.17:751,51,0	1/1:0,25:25:69.23:1016,69,0	1/1:0,25:25:63.21:928,63,0	1/1:0,14:14:27.09:398,27,0	1/1:1,18:19:42.14:619,42,0	1/1:3,26:28:60.20:884,60,0	1/1:2,14:16:42.14:615,42,0	1/1:0,13:13:36.12:521,36,0	1/1:2,36:37:96.32:1414,96,0	1/1:0,18:18:51.17:750,51,0	1/1:0,19:19:45.04:663,45,0	1/1:1,16:16:36.12:528,36,0	1/1:0,16:16:39.13:574,39,0	1/1:1,25:26:75.22:1059,75,0	1/1:2,22:24:63.21:927,63,0	1/1:0,10:10:30.10:442,30,0
chr10	10674297	.	ACCAC	A	210.93	PASS	AB=0.854;AC=10;AF=0.192;AN=52;BaseQRankSum=6.000;DP=175;FS=19.461;HRun=0;HaplotypeScore=47.2365;InbreedingCoeff=-0.2768;MQ=57.11;MQ0=8;MQRankSum=-3.751;QD=3.10;ReadPosRankSum=3.640;VQSLOD=-0.2742;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:2,0:2:3.01:0,3,41	./.	0/0:13,0:6:13.55:0,14,134	0/0:15,0:6:13.29:0,13,164	0/0:4,0:4:6.88:0,7,50	0/0:13,0:13:36.12:0,36,488	0/0:6,0:6:15.04:0,15,189	0/0:3,0:3:6.02:0,6,82	0/0:8,0:8:20.93:0,21,283	0/1:7,1:8:7.34:7,0,150	0/0:3,0:3:8.99:0,9,75	0/1:4,1:5:40.36:40,0,56	0/0:6,0:5:14.96:0,15,127	0/1:7,1:8:48.06:90,0,48	0/1:5,1:6:12.33:12,0,116	0/1:6,1:6:37.08:37,0,70	0/1:8,1:9:42.99:43,0,124	0/0:10,0:9:20.94:0,21,176	0/0:4,0:4:12.04:0,12,203	./.	0/0:7,0:6:12.04:0,12,155	0/1:2,1:3:21.30:21,0,37	0/1:3,2:5:31.97:32,0,37	0/0:8,0:8:17.97:0,18,147	0/0:4,0:4:11.94:0,12,91	0/1:8,2:10:33.64:34,0,137	0/1:7,0:7:29.39:29,0,107	0/0:1,0:1:3:0,3,25
chr10	10678935	.	T	TA	6412.90	PASS	AB=0.677;AC=34;AF=0.607;AN=56;BaseQRankSum=-7.325;DP=636;FS=0.739;HRun=12;HaplotypeScore=80.7262;InbreedingCoeff=0.6766;MQ=76.25;MQ0=4;MQRankSum=-1.219;QD=15.02;ReadPosRankSum=1.109;VQSLOD=5.6333;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:23:52.73:0,53,378	1/1:1,2:3:6.01:58,6,0	0/1:47,0:28:10.92:11,0,50	0/0:31,1:20:15.65:0,16,80	1/1:5,1:27:52.22:303,52,0	0/0:31,1:33:53.61:0,54,543	0/0:8,0:8:20.87:0,21,153	0/0:35,0:38:75.75:0,76,648	0/0:20,0:20:29.42:0,29,327	1/1:11,22:33:65.53:598,66,0	1/1:4,19:24:59.93:568,60,0	1/1:5,15:20:17.26:328,17,0	1/1:5,21:27:38.20:532,38,0	1/1:5,6:11:0.45:140,0,0	1/1:4,23:28:43.91:562,44,0	0/1:7,21:28:22.91:415,0,23	1/1:2,16:18:45.07:438,45,0	0/1:5,17:21:1.75:308,0,2	0/0:20,0:20:47.19:0,47,333	0/0:26,0:28:73.55:0,74,525	0/0:5,0:6:10.96:0,11,70	1/1:3,15:18:35.04:317,35,0	1/1:5,11:17:26.48:247,26,0	0/1:3,9:12:10.72:230,0,11	1/1:7,1:27:45.67:236,46,0	1/1:10,17:27:10.39:417,10,0	1/1:5,21:27:53.92:510,54,0	1/1:3,7:10:21:195,21,0
chr10	10680193	.	CTTT	C	7726.78	PASS	AB=0.568;AC=38;AF=0.679;AN=56;BaseQRankSum=-13.091;DP=594;FS=26.656;HRun=14;HaplotypeScore=104.8153;InbreedingCoeff=0.4441;MQ=69.05;MQ0=5;MQRankSum=-1.339;QD=16.58;ReadPosRankSum=2.945;VQSLOD=1.7631;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:3,0:28:22.43:0,22,49	1/1:2,13:15:39.06:453,39,0	0/0:30,0:12:14.51:0,15,174	0/0:26,1:13:4.93:0,5,18	0/1:5,1:32:23.61:24,0,42	0/1:5,2:25:30.52:31,0,114	0/0:5,0:14:11.73:0,12,66	0/1:10,2:30:35.80:36,0,61	0/0:1,0:14:5.50:0,6,16	1/1:3,14:18:45.01:507,45,0	1/1:5,19:26:40.56:564,41,0	1/1:4,16:20:42.07:490,42,0	1/1:5,11:17:25.56:313,26,0	1/1:3,9:13:23.95:263,24,0	1/1:4,18:25:49.51:559,50,0	1/1:3,13:17:39.01:439,39,0	1/1:4,19:23:54.96:616,55,0	1/1:2,15:18:39.02:439,39,0	0/1:9,2:26:59.74:60,0,89	0/1:3,1:18:15.04:17,0,15	0/0:3,0:14:8.72:0,9,19	1/1:3,9:12:23.98:277,24,0	1/1:4,16:21:44.91:508,45,0	1/1:1,18:20:48.07:540,48,0	0/1:5,2:22:41.97:42,0,49	1/1:4,22:27:61.62:712,62,0	1/1:5,18:24:37.63:453,38,0	1/1:2,13:15:33.06:385,33,0
chr10	10682026	.	TCACACACACACACAGACACACACACA	T	941.09	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=2.224;DP=788;FS=2.519;HRun=0;HaplotypeScore=411.2238;InbreedingCoeff=0.8644;MQ=64.51;MQ0=28;MQRankSum=-2.318;QD=13.25;ReadPosRankSum=-1.580;VQSLOD=0.4498;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:72.70:0,73,6329	0/0:11,0:12:30.10:0,30,2938	0/0:95,0:24:41.87:0,42,998	0/0:108,0:38:45.68:0,46,1011	0/0:27,0:27:69.24:0,69,6240	0/0:21,0:21:39.11:0,39,2989	0/0:24,0:25:57.20:0,57,3781	1/1:24,0:23:6.01:82,6,0	0/0:18,0:17:36.12:0,36,3750	0/0:21,0:21:54.15:0,54,4843	0/0:13,0:13:33.11:0,33,3286	0/0:28,0:28:72.23:0,72,6631	0/0:26,0:26:66.18:0,66,5251	0/0:24,0:24:72.25:0,72,7697	0/0:37,0:37:96.32:0,96,9401	0/0:25,0:25:69.69:0,70,6853	0/0:30,0:30:78.25:0,78,7621	0/0:29,0:29:78.27:0,78,8353	1/1:4,4:7:15.02:690,15,0	1/1:8,12:19:3:207,3,0	1/1:8,11:18:4.26:95,4,0	0/0:19,0:19:51.18:0,51,4682	0/0:18,0:18:48.16:0,48,4377	0/0:29,0:29:75.26:0,75,7484	0/0:26,0:26:54.19:0,54,4560	0/0:23,0:24:66.23:0,66,6328	0/0:21,0:20:57.20:0,57,6046	0/0:7,0:8:21.07:0,21,1733
chr10	10682041	.	G	GAC	1017.23	PASS	AB=0.792;AC=6;AF=0.115;AN=52;BaseQRankSum=-4.597;DP=832;FS=0.748;HRun=0;HaplotypeScore=114.0164;InbreedingCoeff=0.4572;MQ=56.39;MQ0=38;MQRankSum=1.458;QD=11.43;ReadPosRankSum=1.115;VQSLOD=3.3691;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:29:47.53:0,48,523	0/0:12,0:12:24.05:0,24,271	0/0:135,0:22:11.69:0,12,125	0/0:135,0:21:17.44:0,17,147	0/0:19,1:22:9.08:0,9,550	1/1:3,15:18:21.07:334,21,0	0/1:11,16:28:11.11:310,0,11	./.	1/1:5,13:17:0.58:482,1,0	0/0:23,0:23:41.70:0,42,455	0/0:16,0:16:33.10:0,33,388	0/0:27,0:30:56.56:0,57,601	0/0:22,1:23:37.35:0,37,520	0/0:26,0:26:72.22:0,72,853	0/0:35,0:36:81.08:0,81,942	0/0:27,0:29:68.86:0,69,767	0/0:26,0:29:74.44:0,74,788	0/0:24,0:28:77.38:0,77,808	0/0:6,0:6:8.52:0,9,42	0/0:13,0:12:2.71:0,3,14	./.	0/0:24,0:24:41.70:0,42,473	0/0:18,0:19:36.05:0,36,417	0/0:33,0:33:75.16:0,75,864	0/1:24,1:25:8.64:9,0,378	0/0:24,0:25:53.95:0,54,598	0/0:24,0:26:71.71:0,72,786	0/0:8,0:8:15.01:0,15,163
chr10	10682112	.	C	CAG	87.56	PASS	AB=0.928;AC=7;AF=0.125;AN=56;BaseQRankSum=6.296;DP=584;FS=15.826;HRun=0;HaplotypeScore=106.0462;InbreedingCoeff=-0.0531;MQ=48.43;MQ0=49;MQRankSum=1.743;QD=0.71;ReadPosRankSum=-3.807;VQSLOD=-0.4864;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:19:35.89:0,36,284	0/1:9,1:10:30.92:31,0,163	1/1:23,0:2:0.26:1,0,0	0/0:37,0:4:5.98:0,6,47	0/0:15,0:15:20.97:0,21,201	0/0:11,0:10:11.27:0,11,96	0/0:43,0:39:43.42:0,43,404	0/0:10,0:5:14.86:0,15,106	0/1:13,0:13:48.58:49,0,49	0/0:23,0:21:57.01:0,57,462	0/0:13,0:12:26.86:0,27,212	0/1:30,0:29:15.30:15,0,280	0/0:14,0:13:4.45:0,4,249	0/0:21,0:21:3.17:0,3,337	0/0:22,0:22:27.95:0,28,358	0/0:19,0:19:38.98:0,39,407	0/0:36,1:34:3.25:0,3,508	0/1:25,6:29:79.02:79,0,524	0/0:12,0:11:27.13:0,27,181	0/0:10,0:9:5.59:0,6,34	0/0:40,0:29:10.79:0,11,87	0/0:23,0:21:29.53:0,30,250	0/0:13,0:13:23.95:0,24,200	0/0:33,1:31:11.68:0,12,445	0/1:15,2:16:27.59:28,0,197	0/0:25,0:21:56.56:0,57,467	0/0:13,0:12:29.73:0,30,224	0/0:3,0:2:5.98:0,6,46
chr10	10682155	.	ACACACCCACC	A	6703.49	PASS	AB=0.969;AC=38;AF=0.679;AN=56;BaseQRankSum=-3.523;DP=491;FS=4.070;HRun=0;HaplotypeScore=123.8080;InbreedingCoeff=-0.1196;MQ=48.30;MQ0=58;MQRankSum=4.014;QD=14.77;ReadPosRankSum=6.015;VQSLOD=3.0393;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:7:5.96:0,6,32	0/1:11,0:11:57.99:257,0,58	0/0:11,0:1:2.94:0,3,18	0/1:9,0:2:48.04:49,0,48	0/0:16,0:15:6.49:0,6,69	1/1:11,0:8:8.85:141,9,0	1/1:25,0:21:12.77:227,13,0	1/1:29,0:23:50.95:789,51,0	1/1:11,0:11:8.76:104,9,0	0/1:30,0:25:64.56:420,0,65	1/1:9,0:7:6.02:73,6,0	0/1:33,0:30:7.25:512,0,7	1/1:17,0:16:1.79:443,2,0	0/1:13,0:13:22.80:23,0,88	0/1:17,0:17:10.24:10,0,57	0/1:15,0:15:92.33:320,0,92	1/1:29,0:26:35.55:802,36,0	0/1:27,0:24:99:533,0,138	1/1:13,0:7:8.90:131,9,0	1/1:6,0:5:3.01:48,3,0	1/1:35,0:22:25.64:412,26,0	1/1:16,0:14:4.97:198,5,0	0/1:10,0:9:10.36:10,0,27	0/1:13,18:28:52.14:52,0,53	0/1:16,0:15:41.30:270,0,41	0/1:22,0:17:46.44:228,0,46	1/1:5,0:4:11.28:185,11,0	1/1:14,0:10:30.10:467,30,0
chr10	10682157	.	ACACCCACC	A	7703.50	PASS	AB=0.833;AC=48;AF=0.857;AN=56;BaseQRankSum=-4.655;DP=483;FS=0.000;HRun=0;HaplotypeScore=110.5494;InbreedingCoeff=0.4081;MQ=49.82;MQ0=55;MQRankSum=5.174;QD=17.27;ReadPosRankSum=4.902;VQSLOD=3.5121;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:7:5.96:0,6,32	1/1:11,0:11:18.06:324,18,0	0/0:11,0:1:2.94:0,3,18	0/1:10,0:3:45.04:81,0,45	0/0:16,0:15:0.47:0,0,1	1/1:11,0:8:9:141,9,0	1/1:22,0:19:14.05:230,14,0	1/1:30,0:24:54.08:809,54,0	1/1:11,0:11:11.92:110,12,0	1/1:15,14:24:35.85:485,36,0	1/1:9,0:7:6.02:73,6,0	1/1:31,1:29:28.63:664,29,0	1/1:17,0:16:33.10:519,33,0	1/1:4,8:12:2.90:75,3,0	1/1:4,13:17:1.99:52,2,0	1/1:16,0:16:26.12:377,26,0	1/1:30,0:27:59.03:810,59,0	1/1:26,0:23:39.12:693,39,0	1/1:13,0:7:9.03:131,9,0	1/1:6,0:5:3.01:48,3,0	1/1:35,0:23:29.23:431,29,0	1/1:15,1:14:5.73:263,6,0	0/1:5,5:9:0.09:0,0,0	1/1:29,1:27:5.77:138,6,0	1/1:16,0:15:20.60:345,21,0	1/1:19,0:14:18.01:251,18,0	1/1:5,0:4:11.20:185,11,0	1/1:13,0:10:30.10:467,30,0
chr10	10682159	.	ACCCACC	A	7137.70	PASS	AB=0.971;AC=37;AF=0.661;AN=56;BaseQRankSum=-4.596;DP=474;FS=0.000;HRun=0;HaplotypeScore=100.6148;InbreedingCoeff=-0.0275;MQ=50.26;MQ0=52;MQRankSum=3.714;QD=16.64;ReadPosRankSum=6.050;VQSLOD=3.6542;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:7:6.85:0,7,35	0/1:11,0:11:25.61:268,0,26	0/0:11,0:1:2.94:0,3,18	0/1:10,0:3:45.04:81,0,45	0/0:7,0:13:6.45:0,6,50	1/1:11,0:8:9.50:142,10,0	1/1:20,0:18:15.58:234,16,0	1/1:12,19:25:54.55:811,55,0	1/1:11,0:11:14.32:143,14,0	0/1:28,0:24:7.77:444,0,8	1/1:3,6:7:6.02:73,6,0	0/1:31,0:28:3.53:512,0,4	1/1:15,0:14:4.74:458,5,0	0/1:11,0:11:33.44:33,0,80	0/1:17,0:17:14.20:14,0,55	0/1:15,0:15:96.82:331,0,97	1/1:29,0:26:24.56:685,25,0	0/1:25,0:22:85.36:600,0,85	1/1:14,0:8:12.04:174,12,0	1/1:6,0:5:3.01:48,3,0	1/1:37,0:26:38.48:560,38,0	1/1:15,0:13:5.27:212,5,0	0/0:10,0:9:2.90:0,3,16	0/1:29,0:26:41.62:63,0,42	0/1:17,0:16:22.87:356,0,23	0/1:10,9:14:35.54:242,0,36	1/1:5,0:4:11.35:185,11,0	1/1:13,0:10:30.10:467,30,0
chr10	10689705	.	T	TG	562.02	PASS	AB=0.819;AC=12;AF=0.214;AN=56;BaseQRankSum=8.402;DP=359;FS=35.421;HRun=0;HaplotypeScore=61.1903;InbreedingCoeff=-0.3137;MQ=58.80;MQ0=1;MQRankSum=-5.900;QD=3.82;ReadPosRankSum=3.492;VQSLOD=1.3108;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:15,2:17:25.14:25,0,464	0/0:4,0:4:7.57:0,8,88	0/0:20,0:14:34.84:0,35,382	0/0:24,0:13:27.84:0,28,334	0/0:6,2:8:9.01:0,9,122	0/1:8,4:12:74.04:74,0,299	0/0:23,3:26:27.46:0,27,773	0/1:11,8:19:99:243,0,281	0/1:9,1:10:5.03:5,0,342	0/1:7,5:12:99:154,0,238	0/0:6,0:6:12.01:0,12,147	0/0:20,1:21:22.01:0,22,669	0/0:15,2:17:2.98:0,3,519	0/1:12,2:14:7.94:8,0,395	0/1:10,3:13:62.84:63,0,330	0/1:9,2:11:13.71:14,0,335	0/0:9,1:10:12.91:0,13,316	0/1:10,1:11:17.53:18,0,341	0/1:7,1:8:12.37:12,0,269	0/0:5,1:6:1.06:0,1,151	0/0:21,2:24:20:0,20,577	0/0:5,0:5:15.05:0,15,208	0/0:16,1:17:33.33:0,33,568	0/0:11,0:11:21.07:0,21,282	0/0:9,2:11:0.51:0,1,334	0/1:9,3:12:66.43:66,0,337	0/1:5,3:8:22.13:22,0,185	0/0:2,0:2:6.02:0,6,81
chr10	10690795	.	AT	A	3563.52	PASS	AB=0.974;AC=35;AF=0.625;AN=56;BaseQRankSum=-9.117;DP=614;FS=7.219;HRun=4;HaplotypeScore=101.6886;InbreedingCoeff=-0.1810;MQ=65.40;MQ0=16;MQRankSum=-2.061;QD=6.42;ReadPosRankSum=-2.626;VQSLOD=-0.5932;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:32,1:33:2.60:189,0,3	0/1:4,0:4:1.35:20,0,1	0/0:29,0:12:18.15:0,18,159	0/0:30,0:17:6.38:0,6,156	1/1:25,1:26:44.86:366,45,0	0/1:11,1:12:6.84:43,0,7	0/1:11,0:11:5.25:36,0,5	1/1:28,0:24:7.28:86,7,0	1/1:20,1:21:3.47:153,3,0	1/1:37,3:40:45.16:398,45,0	0/1:17,0:17:6.12:57,0,6	0/1:15,0:15:4.27:71,0,4	0/1:21,1:22:26.05:93,0,26	0/1:17,1:18:3.91:75,0,4	1/1:22,0:22:4.13:126,4,0	0/1:21,1:22:3.49:153,0,3	0/1:36,2:38:68.89:123,0,69	0/1:15,2:17:2.98:102,0,3	0/1:27,0:25:9.64:113,0,10	1/1:21,3:24:7.72:201,8,0	0/1:12,0:12:5.66:27,0,6	0/1:14,0:13:8.81:26,0,9	0/1:29,0:28:5.70:80,0,6	1/1:12,1:13:20.34:176,20,0	1/1:28,0:27:50.85:422,51,0	1/1:24,1:25:36.16:286,36,0	0/1:23,1:22:3.65:106,0,4	0/1:13,0:13:8.78:36,0,9
chr10	10690798	.	TTA	T	2217.03	PASS	AB=0.997;AC=24;AF=0.429;AN=56;BaseQRankSum=-10.530;DP=638;FS=11.187;HRun=0;HaplotypeScore=113.4806;InbreedingCoeff=-0.4108;MQ=66.18;MQ0=11;MQRankSum=-1.146;QD=4.43;ReadPosRankSum=-4.301;VQSLOD=0.5140;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:35,0:36:48.67:49,0,258	0/1:4,0:4:14.71:15,0,39	0/0:31,0:13:29.04:0,29,240	0/1:29,0:17:3.99:4,0,178	1/1:1,24:26:53.72:684,54,0	0/0:14,0:14:5.31:0,5,142	0/0:12,0:12:9.15:0,9,114	0/1:28,0:26:31.25:31,0,245	0/1:21,0:21:77.22:77,0,190	0/1:42,0:42:99:162,0,275	0/1:18,0:18:13.32:13,0,156	0/1:16,0:16:12.17:12,0,159	0/1:23,0:23:34.92:35,0,230	0/1:21,0:21:0.51:1,0,197	0/1:22,0:22:89.60:90,0,187	0/1:24,0:24:78.89:79,0,193	0/0:36,0:37:6.93:0,7,450	0/1:17,0:18:58.99:59,0,168	0/1:23,0:24:2.25:2,0,199	0/1:29,0:29:50.71:51,0,258	0/1:12,0:12:7.44:7,0,131	0/0:15,0:15:16.28:0,16,166	0/0:28,0:28:10.99:0,11,254	0/1:14,0:14:65.20:65,0,66	1/1:1,28:29:28.66:768,29,0	0/1:24,0:25:99:134,0,130	0/1:24,0:23:22.86:23,0,196	0/1:13,0:13:16.91:17,0,133
chr10	10691458	.	A	ACTCT	45891.58	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-9.518;DP=762;FS=6.729;HRun=0;HaplotypeScore=108.3971;InbreedingCoeff=0.9997;MQ=70.42;MQ0=0;MQRankSum=-10.751;QD=65.00;ReadPosRankSum=6.008;VQSLOD=6.8538;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,31:35:93.32:2478,93,0	1/1:1,14:16:42.05:1119,42,0	0/0:24,0:23:53.92:0,54,954	0/0:32,0:32:85.53:0,86,1516	1/1:2,25:28:72.25:1905,72,0	1/1:1,14:15:39.13:1038,39,0	1/1:3,26:32:81.28:2148,81,0	1/1:22,23:45:99:2838,111,0	1/1:3,19:23:54.19:1431,54,0	1/1:4,31:36:99:2660,105,0	1/1:5,13:18:36.12:957,36,0	1/1:4,31:35:99:2599,99,0	1/1:5,27:32:75.26:1997,75,0	1/1:4,22:26:69.24:1797,69,0	1/1:4,27:33:69.24:1838,69,0	1/1:1,33:34:96.33:2535,96,0	1/1:5,17:22:51.18:1358,51,0	1/1:3,27:31:78.27:2079,78,0	1/1:5,12:17:51.17:1289,51,0	1/1:3,14:18:39.13:1039,39,0	1/1:2,19:21:36.12:957,36,0	1/1:3,30:33:75.26:1993,75,0	1/1:4,12:18:36.12:957,36,0	1/1:1,26:28:66.22:1759,66,0	1/1:6,20:28:60.21:1599,60,0	1/1:4,24:28:84.29:2185,84,0	1/1:4,24:26:66.06:1739,66,0	1/1:5,20:25:60.21:1598,60,0
chr10	10693419	.	A	AGATC	715	PASS	AB=0.970;AC=11;AF=0.204;AN=54;BaseQRankSum=4.137;DP=291;FS=0.000;HRun=0;HaplotypeScore=111.5944;InbreedingCoeff=0.4299;MQ=45.09;MQ0=6;MQRankSum=-2.823;QD=10.21;ReadPosRankSum=2.094;VQSLOD=2.5292;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:9.26:0,9,64	1/1:3,0:3:0.32:1,0,0	0/0:13,0:5:5.98:0,6,48	0/0:9,0:3:2.94:0,3,18	0/0:19,0:19:50.88:0,51,640	1/1:8,7:15:28.14:538,28,0	1/1:8,0:8:5.99:67,6,0	0/0:15,0:15:38.31:0,38,290	1/1:5,2:6:9.03:158,9,0	0/1:9,0:10:52.27:52,0,85	0/0:11,0:11:26.58:0,27,183	0/0:13,0:13:36.16:0,36,270	0/0:10,0:10:13.31:0,13,104	0/0:5,0:5:11.77:0,12,75	0/0:19,0:19:17.79:0,18,141	0/0:11,0:11:29.82:0,30,259	0/0:6,0:5:8.37:0,8,75	0/0:4,0:4:5.21:0,5,56	0/0:11,0:11:27.98:0,28,250	0/0:10,0:10:22.52:0,23,200	0/0:8,0:8:11.97:0,12,102	0/0:9,0:9:21.20:0,21,144	0/0:9,0:8:8.55:0,9,47	0/0:11,0:11:9.42:0,9,71	0/1:12,0:11:26.62:27,0,237	0/0:15,0:15:42.42:0,42,399	0/1:15,0:15:16.06:16,0,90	./.
chr10	10693442	.	TAGAAAGAGAG	T	3422.16	PASS	AB=0.854;AC=29;AF=0.558;AN=52;BaseQRankSum=2.672;DP=255;FS=10.882;HRun=0;HaplotypeScore=106.6003;InbreedingCoeff=0.2029;MQ=55.33;MQ0=8;MQRankSum=-3.248;QD=20.13;ReadPosRankSum=6.005;VQSLOD=1.3697;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,1:9:6:99,6,0	1/1:0,3:3:9.03:226,9,0	0/0:20,0:5:11.78:0,12,189	0/0:22,0:9:21.43:0,21,365	0/0:13,0:13:33.39:0,33,466	0/1:13,0:13:8.56:72,0,9	./.	1/1:4,6:10:20.99:417,21,0	0/1:6,0:5:0.62:64,0,1	1/1:1,5:6:18.05:524,18,0	0/1:6,0:10:1.67:2,0,43	0/1:7,0:10:14.41:14,0,137	1/1:6,0:6:5.62:27,6,0	0/0:3,0:3:8.99:0,9,105	1/1:2,13:15:18.06:455,18,0	0/1:8,0:9:35.67:36,0,73	1/1:5,0:4:9:193,9,0	1/1:1,3:4:6.02:169,6,0	0/1:4,0:8:16.78:191,0,17	0/1:4,0:4:1.93:2,0,64	0/0:8,0:8:2.88:0,3,44	0/1:5,0:8:11.94:12,0,56	0/1:9,0:8:99:114,0,210	0/1:7,0:9:0.35:1,0,0	0/0:10,0:9:24.05:0,24,412	0/1:11,0:14:40.84:241,0,41	1/1:1,10:11:18.06:564,18,0	./.
chr10	10693444	.	GAA	G	1718.46	PASS	AB=0.929;AC=42;AF=0.808;AN=52;BaseQRankSum=2.203;DP=248;FS=16.325;HRun=3;HaplotypeScore=85.8422;InbreedingCoeff=0.5934;MQ=55.36;MQ0=8;MQRankSum=-2.509;QD=9.93;ReadPosRankSum=5.225;VQSLOD=-0.7533;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:9,0:9:4.61:40,5,0	1/1:3,0:3:8.83:54,9,0	0/0:21,0:5:11.51:0,12,108	0/0:23,0:9:18.65:0,19,189	0/0:13,0:13:30.35:0,30,269	0/1:13,0:13:10.90:47,0,11	./.	1/1:7,1:8:20.95:219,21,0	1/1:6,0:5:2:39,2,0	1/1:6,0:6:11.68:99,12,0	1/1:8,1:9:14.78:97,15,0	1/1:10,0:10:11.68:71,12,0	1/1:6,0:6:5.86:37,6,0	1/1:0,3:3:9.03:113,9,0	1/1:14,0:14:17.65:123,18,0	1/1:9,0:9:11.42:69,11,0	1/1:5,0:4:8.59:69,9,0	1/1:4,0:4:5.93:54,6,0	1/1:9,0:8:17.41:127,17,0	1/1:4,0:4:3.01:31,3,0	0/1:5,1:6:0:0,0,0	1/1:8,0:8:11.82:79,12,0	1/1:4,5:8:12.04:147,12,0	1/1:6,1:7:2.96:20,3,0	0/0:10,0:9:24.04:0,24,251	1/1:11,3:14:32.16:243,32,0	1/1:11,0:11:17.44:98,17,0	./.
chr10	10693446	.	A	AAGAG	608.88	PASS	AB=1.000;AC=16;AF=0.320;AN=50;BaseQRankSum=-1.430;DP=235;FS=2.619;HRun=0;HaplotypeScore=92.3067;InbreedingCoeff=0.4334;MQ=55.44;MQ0=9;MQRankSum=0.313;QD=7.61;ReadPosRankSum=-1.873;VQSLOD=2.3596;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:8:0.89:0,1,2	0/0:3,0:3:0:0,0,0	0/0:23,0:5:11.06:0,11,77	0/0:23,0:9:8.14:0,8,109	1/1:7,4:11:3.01:37,3,0	1/1:13,0:13:7.38:231,7,0	./.	0/1:7,0:7:8.01:8,0,16	1/1:6,0:5:7.26:74,7,0	1/1:6,0:6:6.06:69,6,0	0/0:8,0:8:0.47:0,0,3	0/1:9,0:9:0.37:0,0,10	0/0:5,0:5:5.54:0,6,25	0/0:3,0:3:8.74:0,9,51	0/0:14,0:14:4.05:0,4,12	0/0:8,0:8:11.22:0,11,71	0/0:5,0:4:5.80:0,6,32	0/0:4,0:4:5.90:0,6,41	0/0:8,0:7:14.70:0,15,110	1/1:3,0:3:3:25,3,0	./.	0/0:8,0:8:3.63:0,4,9	0/0:10,0:8:9.94:0,10,52	0/1:5,0:5:0.37:0,0,0	1/1:4,5:8:12.04:281,12,0	0/0:13,0:13:32.70:0,33,242	0/1:10,0:11:20.58:25,0,21	./.
chr10	10693448	.	G	GAT	1103.46	PASS	AB=0.925;AC=22;AF=0.423;AN=52;BaseQRankSum=0.409;DP=241;FS=5.651;HRun=0;HaplotypeScore=88.3549;InbreedingCoeff=0.3750;MQ=54.38;MQ0=10;MQRankSum=-2.464;QD=9.35;ReadPosRankSum=1.314;VQSLOD=2.6950;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,2:8:1.53:4,2,0	0/0:3,0:3:0:0,0,0	0/0:27,0:5:11.51:0,12,110	0/0:23,0:9:16.13:0,16,200	0/0:11,0:11:14.90:0,15,114	1/1:1,11:12:24.08:323,24,0	./.	1/1:8,0:8:20.40:207,20,0	1/1:0,6:5:9.03:134,9,0	1/1:6,0:6:14.56:105,15,0	0/0:8,0:8:20.31:0,20,116	0/0:8,0:8:23.23:0,23,136	0/0:5,0:5:7.43:0,7,29	1/1:3,0:3:7.92:41,8,0	0/1:14,0:14:4.74:31,0,5	0/0:8,0:8:18.69:0,19,98	0/1:3,2:4:4.28:45,0,4	0/1:3,1:4:7.91:31,0,8	0/1:7,1:7:46.44:46,0,53	0/1:5,0:5:1.11:1,0,27	0/0:3,2:5:2.99:0,3,24	0/0:7,0:7:16.62:0,17,84	1/1:10,0:8:23.72:185,24,0	0/1:7,0:7:5.39:15,0,5	0/1:9,0:8:3.01:3,0,39	0/1:13,0:13:88.09:100,0,88	0/0:11,0:11:13.63:0,14,61	./.
chr10	10693453	.	AG	A	743.51	PASS	AB=1.000;AC=31;AF=0.596;AN=52;BaseQRankSum=1.058;DP=215;FS=13.642;HRun=1;HaplotypeScore=75.5127;InbreedingCoeff=0.5777;MQ=55.46;MQ0=9;MQRankSum=-2.089;QD=6.47;ReadPosRankSum=2.131;VQSLOD=-0.7229;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:4:2.97:20,3,0	1/1:3,0:3:8.90:60,9,0	0/0:27,0:5:12.04:0,12,172	0/0:23,0:9:20.58:0,21,275	0/0:8,0:8:9.03:0,9,121	0/0:11,0:11:7.75:0,8,71	./.	0/1:8,0:8:6.41:6,0,47	0/0:6,0:5:2.40:0,2,19	0/0:6,0:6:6.77:0,7,57	1/1:6,1:7:17.82:123,18,0	1/1:4,1:5:10.98:70,11,0	1/1:3,2:5:6.86:47,7,0	0/0:3,0:3:1.41:0,1,4	1/1:13,1:14:16.39:103,16,0	1/1:2,3:5:13.76:96,14,0	0/0:3,0:3:2.97:0,3,10	1/1:4,0:4:0.62:3,1,0	1/1:7,0:6:11.33:62,11,0	1/1:2,3:5:3:26,3,0	0/1:4,0:4:0.01:0,0,0	1/1:3,2:5:11.91:90,12,0	0/1:10,0:8:3.34:3,0,138	1/1:5,2:7:3.47:21,3,0	0/0:7,0:6:15.03:0,15,154	1/1:6,5:11:25.69:140,26,0	1/1:11,0:11:11.22:41,11,0	./.
chr10	10693456	.	GA	G	184.27	PASS	AB=1.000;AC=23;AF=0.442;AN=52;BaseQRankSum=-0.377;DP=207;FS=5.950;HRun=1;HaplotypeScore=76.3977;InbreedingCoeff=0.5744;MQ=55.31;MQ0=8;MQRankSum=-1.601;QD=2.52;ReadPosRankSum=2.122;VQSLOD=-0.5147;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:4,0:4:0:0,0,0	0/1:3,0:3:0:1,0,0	0/0:26,0:5:11.78:0,12,126	0/0:23,0:9:19.95:0,20,237	0/0:7,0:7:6.02:0,6,81	0/0:10,0:10:15.45:0,15,137	./.	0/0:10,0:10:3.32:0,3,40	0/0:6,0:5:5.11:0,5,31	0/0:6,0:6:16.23:0,16,106	1/1:5,1:6:14.20:69,14,0	1/1:3,1:4:8.98:45,9,0	1/1:3,2:5:6.38:27,6,0	0/0:3,0:3:1.41:0,1,4	0/0:14,0:14:0.94:0,1,4	1/1:1,3:4:8.71:38,9,0	0/0:3,0:3:3.45:0,3,23	0/0:4,0:4:3.22:0,3,13	1/1:7,0:6:3.82:14,4,0	1/1:3,1:4:2.80:13,3,0	1/1:4,0:4:0.47:1,0,0	1/1:3,2:5:11.51:61,12,0	0/1:9,0:7:0.75:1,0,49	1/1:5,2:7:2.59:13,3,0	0/0:6,0:5:12.01:0,12,115	1/1:6,5:11:16.63:58,17,0	0/0:11,0:11:8.66:0,9,46	./.
chr10	10693464	.	A	AAG	1206.63	PASS	AB=1.000;AC=32;AF=0.889;AN=36;BaseQRankSum=-1.398;DP=182;FS=0.000;HRun=0;HaplotypeScore=71.0476;InbreedingCoeff=0.2013;MQ=53.96;MQ0=7;MQRankSum=-0.615;QD=9.07;ReadPosRankSum=0.056;VQSLOD=2.7515;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	./.	1/1:23,0:4:2.74:12,3,0	0/1:17,0:8:0:0,0,0	./.	0/1:9,0:9:0:0,0,0	./.	1/1:5,4:9:9.03:138,9,0	0/0:6,0:5:3.01:0,3,35	1/1:5,0:5:2.98:22,3,0	./.	1/1:4,0:4:3.01:49,3,0	1/1:5,0:5:6.02:98,6,0	1/1:1,2:3:3.01:37,3,0	1/1:10,0:10:6.02:74,6,0	1/1:4,0:4:9.03:147,9,0	1/1:2,1:3:3.01:38,3,0	1/1:3,1:4:3.01:49,3,0	1/1:7,1:6:9.03:137,9,0	./.	./.	1/1:5,0:5:3.01:48,3,0	1/1:5,1:4:2.94:18,3,0	1/1:4,3:7:3.01:36,3,0	./.	1/1:8,3:11:24.08:390,24,0	./.	./.
chr10	10695991	.	A	AG	1502.52	PASS	AB=0.869;AC=29;AF=0.537;AN=54;BaseQRankSum=-2.843;DP=422;FS=1.312;HRun=10;HaplotypeScore=47.1442;InbreedingCoeff=0.5137;MQ=55.15;MQ0=34;MQRankSum=0.726;QD=6.01;ReadPosRankSum=-0.039;VQSLOD=0.5167;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:19,7:21:8.67:113,0,9	1/1:2,2:3:3:25,3,0	0/1:22,0:5:6.12:6,0,19	0/0:20,0:7:8.66:0,9,59	0/0:7,0:23:28.51:0,29,84	0/0:19,0:17:29.95:0,30,246	0/0:15,1:14:4.20:0,4,225	0/0:21,0:16:32.92:0,33,265	0/0:16,0:16:34.84:0,35,266	1/1:13,2:10:11.92:93,12,0	1/1:3,5:8:9.02:95,9,0	1/1:4,5:9:3.01:32,3,0	0/1:10,1:10:16.40:30,0,16	1/1:4,5:9:5.91:47,6,0	1/1:8,1:10:6.01:62,6,0	1/1:7,5:13:9.02:94,9,0	1/1:13,21:31:44.88:444,45,0	1/1:13,9:18:22.19:231,22,0	0/0:11,0:10:20.97:0,21,172	0/0:18,0:17:24.36:0,24,179	0/1:13,1:13:1.73:2,0,185	./.	0/0:6,1:8:3.46:0,3,25	1/1:8,6:14:6.49:64,6,0	0/0:5,0:10:15.78:0,16,56	1/1:8,6:9:17.98:176,18,0	0/1:8,5:11:9.23:83,0,9	1/1:2,3:3:9.02:95,9,0
chr10	10696174	.	C	CT	12163.50	PASS	AB=1.000;AC=51;AF=0.911;AN=56;BaseQRankSum=-5.529;DP=408;FS=15.998;HRun=2;HaplotypeScore=43.1466;InbreedingCoeff=0.7274;MQ=62.77;MQ0=0;MQRankSum=0.896;QD=31.11;ReadPosRankSum=4.543;VQSLOD=2.9293;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,25:27:54.93:815,55,0	1/1:0,4:4:12.04:173,12,0	0/0:8,0:5:13.28:0,13,143	0/0:9,0:9:18.40:0,18,155	0/1:29,0:29:3.46:185,0,3	1/1:1,15:16:42.14:603,42,0	1/1:2,9:11:27.02:362,27,0	1/1:1,37:38:99:1510,111,0	1/1:0,17:17:39.13:561,39,0	1/1:2,16:19:51.17:723,51,0	1/1:0,12:12:33.11:471,33,0	1/1:2,11:13:27.09:386,27,0	1/1:0,9:9:15.05:215,15,0	1/1:0,9:9:24.08:345,24,0	1/1:0,11:11:24.08:344,24,0	1/1:0,17:16:36.12:517,36,0	1/1:2,18:20:39.13:561,39,0	1/1:0,26:26:69.19:968,69,0	1/1:2,10:12:30.10:429,30,0	1/1:0,9:9:24.08:345,24,0	1/1:0,6:6:15.05:216,15,0	1/1:0,2:2:5.93:60,6,0	1/1:1,6:7:15.05:216,15,0	1/1:1,4:5:7.62:165,8,0	1/1:20,0:20:20.31:131,20,0	1/1:0,17:17:48.13:651,48,0	1/1:3,20:23:34.51:714,35,0	1/1:1,11:12:36.09:496,36,0
chr10	10696176	.	T	TA	6318.68	PASS	AB=1.000;AC=50;AF=0.893;AN=56;BaseQRankSum=-0.503;DP=405;FS=2.326;HRun=7;HaplotypeScore=63.7446;InbreedingCoeff=0.5411;MQ=62.81;MQ0=0;MQRankSum=-0.667;QD=16.33;ReadPosRankSum=4.958;VQSLOD=4.7632;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:26:58.78:378,59,0	1/1:4,0:4:11.71:71,12,0	0/0:9,0:6:8.03:0,8,135	0/0:9,0:9:12.15:0,12,99	1/1:3,27:30:81.12:929,81,0	1/1:17,0:17:41.05:262,41,0	1/1:11,0:11:23.97:155,24,0	1/1:35,0:35:92.88:544,93,0	1/1:16,0:16:38.09:237,38,0	1/1:18,0:19:25.91:250,26,0	1/1:12,0:12:32.03:196,32,0	1/1:12,0:12:4.25:133,4,0	0/1:10,0:10:5.77:86,0,6	1/1:9,0:9:23.38:149,23,0	1/1:11,0:11:23.51:160,24,0	1/1:17,0:16:35:217,35,0	1/1:20,0:20:38.19:240,38,0	1/1:26,0:26:65.94:414,66,0	1/1:12,0:12:28.96:164,29,0	1/1:10,0:10:23.34:140,23,0	0/1:8,0:8:5.14:73,0,5	1/1:2,0:2:2.94:18,3,0	1/1:5,0:5:14.58:85,15,0	1/1:4,0:5:14.70:96,15,0	1/1:1,18:19:51.16:616,51,0	1/1:17,0:17:40.30:216,40,0	1/1:22,0:22:29.97:282,30,0	1/1:12,0:12:35.06:208,35,0
chr10	10697932	.	GTGTGTGTGTGTGTGTA	G	2451.03	PASS	AB=1.000;AC=31;AF=0.554;AN=56;BaseQRankSum=-0.118;DP=665;FS=2.973;HRun=0;HaplotypeScore=221.1580;InbreedingCoeff=-0.0715;MQ=52.17;MQ0=19;MQRankSum=-0.845;QD=4.85;ReadPosRankSum=3.062;VQSLOD=2.8373;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:24,3:27:38.25:661,38,0	1/1:13,0:13:8.67:110,9,0	0/0:34,0:12:5.89:0,6,93	0/0:43,0:10:5.57:0,6,100	0/1:23,0:23:35.37:35,0,348	0/0:18,0:18:5.87:0,6,134	0/1:20,0:20:30.92:31,0,253	0/1:18,0:17:48.66:49,0,192	0/0:27,0:27:2.60:0,3,41	0/1:35,0:33:99:353,0,110	0/0:11,0:11:1.46:0,1,7	0/1:19,0:19:99:133,0,105	1/1:20,0:20:8.16:78,8,0	1/1:20,0:21:3.01:37,3,0	1/1:27,0:27:12.02:133,12,0	1/1:29,1:30:15.05:321,15,0	0/1:29,0:30:42.52:52,0,43	1/1:30,0:30:3.01:37,3,0	0/1:20,0:19:42.80:43,0,122	0/0:14,0:14:3.01:0,3,31	0/1:49,0:47:92.45:92,0,584	0/1:16,0:16:20.70:53,0,21	0/0:13,0:13:2.64:0,3,14	1/1:35,0:35:1.05:2,1,0	0/1:18,0:18:31.39:31,0,194	0/1:29,0:29:99:174,0,219	1/1:17,0:17:2.59:36,3,0	1/1:8,0:7:9.03:150,9,0
chr10	10697936	.	GTGTGTGTGTGTA	G	6416.12	PASS	AB=0.915;AC=44;AF=0.786;AN=56;BaseQRankSum=-4.044;DP=662;FS=0.000;HRun=0;HaplotypeScore=178.7025;InbreedingCoeff=0.1156;MQ=52.00;MQ0=22;MQRankSum=0.607;QD=11.32;ReadPosRankSum=1.937;VQSLOD=3.8429;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:28:23.96:427,24,0	1/1:2,11:13:8.60:323,9,0	0/0:30,0:9:5.86:0,6,37	0/0:47,0:9:7.96:0,8,80	0/1:24,0:24:56.35:56,0,244	0/0:18,0:18:5.86:0,6,67	0/1:22,0:22:39.51:145,0,40	1/1:16,0:15:25.82:212,26,0	1/1:29,0:29:2.68:11,3,0	1/1:30,5:33:21.04:1009,21,0	1/1:1,9:10:3.73:38,4,0	1/1:19,2:21:44.79:633,45,0	1/1:1,19:20:10.64:274,11,0	1/1:3,18:21:3.01:108,3,0	1/1:3,22:25:15.05:470,15,0	1/1:10,18:28:15.05:499,15,0	0/1:8,20:28:8.69:130,0,9	1/1:7,20:27:3.01:108,3,0	1/1:20,0:19:0.64:262,1,0	1/1:15,0:15:2.97:20,3,0	0/1:49,0:47:33.34:150,0,33	1/1:3,13:16:7.70:233,8,0	1/1:2,12:14:9.03:149,9,0	1/1:4,31:35:1.14:3,1,0	0/1:17,0:17:53.42:53,0,78	0/1:26,3:29:22.79:693,0,23	1/1:0,17:17:2.86:108,3,0	1/1:2,6:7:9.03:304,9,0
chr10	10697938	.	GTGTGTGTGTA	G	5566.24	PASS	AB=1.000;AC=44;AF=0.786;AN=56;BaseQRankSum=-3.343;DP=648;FS=4.066;HRun=0;HaplotypeScore=165.4861;InbreedingCoeff=0.1077;MQ=50.23;MQ0=23;MQRankSum=0.528;QD=9.98;ReadPosRankSum=1.981;VQSLOD=3.6206;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:30:10.18:381,0,10	1/1:13,0:13:8.60:224,9,0	0/0:25,0:5:5.86:0,6,37	0/0:46,0:9:11.85:0,12,84	0/1:23,0:23:55.10:55,0,192	0/0:19,0:19:0.56:0,1,2	0/1:23,0:23:12.14:172,0,12	1/1:17,0:16:43.04:318,43,0	1/1:29,0:29:3.01:37,3,0	1/1:34,0:32:3.29:797,3,0	1/1:10,0:10:3.19:18,3,0	1/1:21,0:21:47.68:500,48,0	1/1:20,0:20:10.61:176,11,0	1/1:20,0:20:3.01:75,3,0	1/1:25,0:25:15.03:306,15,0	1/1:26,0:26:15.05:372,15,0	1/1:26,0:26:8.12:92,8,0	1/1:23,0:23:3.01:75,3,0	1/1:17,2:18:17.62:390,18,0	1/1:1,13:14:3.01:64,3,0	1/1:47,2:47:20.25:420,20,0	0/1:16,0:16:4.60:136,0,5	1/1:14,0:14:8.92:64,9,0	1/1:34,0:34:0.88:2,1,0	0/1:18,0:18:56.96:57,0,59	0/1:29,0:29:48.50:536,0,48	1/1:17,0:17:3.01:75,3,0	1/1:8,0:7:9.03:224,9,0
chr10	10697942	.	GTGTGTA	G	4806.05	PASS	AB=1.000;AC=47;AF=0.839;AN=56;BaseQRankSum=-2.035;DP=626;FS=3.825;HRun=0;HaplotypeScore=142.9716;InbreedingCoeff=-0.0218;MQ=50.22;MQ0=23;MQRankSum=0.223;QD=7.96;ReadPosRankSum=-0.146;VQSLOD=3.9092;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:31:9.05:397,9,0	1/1:11,0:11:8.81:141,9,0	0/0:22,0:4:8.85:0,9,61	0/1:43,0:10:10.82:11,0,91	0/1:24,0:24:73.57:75,0,74	1/1:4,13:17:6.02:124,6,0	1/1:23,0:23:44.36:357,44,0	1/1:20,0:19:51.89:395,52,0	1/1:4,23:27:3.01:49,3,0	0/1:34,0:32:11.52:615,0,12	1/1:10,0:10:3.38:18,3,0	1/1:20,0:20:27.37:357,27,0	1/1:20,0:20:4.62:93,5,0	1/1:19,0:19:3.01:47,3,0	1/1:25,0:25:14.98:190,15,0	1/1:24,0:24:15.05:233,15,0	1/1:26,0:26:10.69:87,11,0	1/1:21,0:21:3.01:47,3,0	0/1:18,0:15:4:244,0,4	1/1:13,0:13:3.01:38,3,0	1/1:45,0:43:59.04:463,59,0	0/1:16,0:16:7.19:83,0,7	1/1:14,0:14:8.81:53,9,0	1/1:32,0:32:0.27:1,0,0	0/1:18,0:18:36.52:79,0,37	0/1:28,0:28:39.39:422,0,39	1/1:17,0:17:3.01:47,3,0	1/1:8,0:7:9.03:140,9,0
chr10	10698143	.	CAT	C	889.08	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.342;DP=648;FS=0.000;HRun=0;HaplotypeScore=118.6348;InbreedingCoeff=0.9825;MQ=85.03;MQ0=0;MQRankSum=-1.529;QD=32.93;ReadPosRankSum=3.112;VQSLOD=5.7784;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,27:27:66.18:984,66,0	0/0:8,0:8:24.08:0,24,454	0/0:24,0:24:69.23:0,69,1269	0/0:19,0:19:48.14:0,48,884	0/0:33,0:33:93.31:0,93,1739	0/0:17,0:17:51.17:0,51,964	0/0:22,0:22:63.20:0,63,1170	0/0:30,0:30:90.27:0,90,1597	0/0:22,0:22:66.21:0,66,1233	0/0:28,0:28:84.29:0,84,1618	0/0:20,0:20:60.21:0,60,1147	0/0:22,0:22:66.21:0,66,1226	0/0:26,0:26:75.20:0,75,1334	0/0:16,0:16:48.16:0,48,906	0/0:26,0:26:75.24:0,75,1399	0/0:34,0:34:99:0,102,1934	0/0:27,0:27:78.25:0,78,1472	0/0:21,0:21:60.21:0,60,1148	0/0:16,0:16:48.15:0,48,869	0/0:25,0:25:75.26:0,75,1428	0/0:26,0:26:75.26:0,75,1448	0/0:25,0:25:75.26:0,75,1440	0/0:19,0:19:57.20:0,57,1064	0/0:25,0:25:72.25:0,72,1369	0/0:25,0:25:75.26:0,75,1447	0/0:35,0:35:99:0,105,1991	0/0:25,0:24:75.21:0,75,1336	0/0:5,0:5:15.05:0,15,290
chr10	10698734	.	T	TTTTTG	18009.74	PASS	AB=1.000;AC=41;AF=0.732;AN=56;BaseQRankSum=-11.125;DP=697;FS=1.897;HRun=0;HaplotypeScore=105.7856;InbreedingCoeff=0.8828;MQ=63.22;MQ0=4;MQRankSum=-0.336;QD=34.70;ReadPosRankSum=2.995;VQSLOD=4.8805;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:48.15:0,48,841	1/1:2,7:9:12.04:323,12,0	0/1:28,0:13:16.60:17,0,208	0/0:41,0:19:11.99:0,12,220	0/0:38,0:38:99:0,105,1876	0/0:17,0:17:30.10:0,30,538	0/0:23,0:23:48.16:0,48,866	1/1:20,0:36:54.63:1102,55,0	0/0:21,0:21:45.15:0,45,837	1/1:9,16:28:57.15:1262,57,0	1/1:8,13:23:42.14:1081,42,0	1/1:4,20:24:30.10:860,30,0	1/1:7,15:23:33.11:892,33,0	1/1:4,13:17:21.07:601,21,0	1/1:6,27:34:39.13:1117,39,0	1/1:5,10:17:18.06:516,18,0	1/1:10,21:33:48.16:1363,48,0	1/1:6,11:18:12.04:344,12,0	1/1:18,13:29:54.11:954,54,0	1/1:8,23:32:63.21:1671,63,0	1/1:1,17:19:24.08:687,24,0	1/1:5,20:28:48.16:1229,48,0	1/1:3,19:23:33.58:875,34,0	1/1:5,22:29:27.09:772,27,0	0/0:15,0:15:36.12:0,36,658	1/1:6,13:19:42.14:1058,42,0	1/1:12,19:33:35.92:1028,36,0	1/1:9,0:12:9.03:258,9,0
chr10	10699508	.	T	TACACACACAC	8775.78	PASS	AB=0.622;AC=46;AF=0.920;AN=50;BaseQRankSum=0.221;DP=594;FS=3.051;HRun=0;HaplotypeScore=182.5560;InbreedingCoeff=0.3806;MQ=58.91;MQ0=7;MQRankSum=-1.033;QD=17.17;ReadPosRankSum=2.009;VQSLOD=4.0590;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:40:3.01:63,3,0	1/1:8,0:8:2.94:117,3,0	./.	0/0:26,0:17:5.91:0,6,66	./.	1/1:9,4:14:3.01:149,3,0	1/1:20,1:33:6.02:237,6,0	1/1:30,0:30:29.80:375,30,0	1/1:9,7:17:19.31:775,19,0	1/1:12,0:18:29.80:1048,30,0	1/1:11,5:16:0.47:1,0,0	./.	1/1:8,6:15:15.05:659,15,0	1/1:17,2:19:21.02:388,21,0	1/1:24,8:34:5.76:183,6,0	1/1:9,0:25:11.56:130,12,0	1/1:21,0:21:24.03:674,24,0	1/1:18,2:20:33.11:1233,33,0	1/1:16,8:24:33.98:941,34,0	1/1:15,0:13:3.01:71,3,0	1/1:27,0:26:12.02:237,12,0	0/1:10,6:20:0:0,0,0	0/1:4,9:15:0:0,0,0	1/1:19,9:29:2.82:149,3,0	1/1:9,0:17:5.27:21,5,0	1/1:12,7:18:27.03:772,27,0	1/1:14,5:19:12.51:393,13,0	1/1:5,0:8:6.02:161,6,0
chr10	10699684	.	A	AGTGT	5641.11	PASS	AB=0.884;AC=48;AF=0.960;AN=50;BaseQRankSum=-2.472;DP=625;FS=0.000;HRun=0;HaplotypeScore=136.7861;InbreedingCoeff=-0.0734;MQ=48.45;MQ0=12;MQRankSum=-0.657;QD=10.22;ReadPosRankSum=1.895;VQSLOD=3.6106;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:32,1:32:20.69:196,21,0	1/1:5,0:5:6.02:128,6,0	./.	./.	1/1:14,3:16:8.60:164,9,0	1/1:6,7:17:8.50:95,8,0	0/1:35,3:41:22.04:296,0,22	1/1:27,0:27:13.10:131,13,0	0/1:23,2:26:11.47:437,0,11	1/1:19,0:18:12.01:168,12,0	1/1:10,3:14:5.07:140,5,0	1/1:12,2:16:14.51:191,15,0	1/1:14,3:17:18.05:308,18,0	1/1:24,5:27:17.57:338,18,0	1/1:21,2:25:6.47:221,6,0	1/1:22,2:25:14.41:372,14,0	1/1:25,10:35:30.95:545,31,0	1/1:9,9:19:11.66:168,12,0	1/1:16,0:15:12.47:160,12,0	./.	1/1:42,0:41:9.02:124,9,0	1/1:10,2:13:2.22:47,2,0	1/1:7,0:6:2.74:12,3,0	1/1:27,6:35:22.26:365,22,0	1/1:13,2:18:11.78:224,12,0	1/1:20,2:19:15.04:286,15,0	1/1:19,2:20:26.56:430,27,0	1/1:5,1:6:6.01:96,6,0
chr10	10699729	.	GAGACAGACAGACAGACAGAC	G	3089.32	PASS	AB=0.718;AC=16;AF=0.400;AN=40;BaseQRankSum=4.456;DP=478;FS=18.288;HRun=0;HaplotypeScore=184.1595;InbreedingCoeff=0.4290;MQ=40.80;MQ0=43;MQRankSum=-4.541;QD=31.21;ReadPosRankSum=2.683;VQSLOD=1.5034;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,5:23:2.04:0,2,6	0/0:5,0:5:0.47:0,0,1	./.	0/0:36,0:3:4.26:0,4,62	0/0:11,0:12:6.02:0,6,252	0/0:18,0:18:24.08:0,24,2240	0/0:38,0:36:47.65:0,48,3652	./.	0/0:19,0:20:24.97:0,25,2049	1/1:9,4:11:12.04:640,12,0	./.	1/1:6,3:9:2.99:24,3,0	0/1:8,6:13:5.95:468,0,6	./.	1/1:7,4:11:3:25,3,0	0/0:13,5:18:3.48:0,3,281	./.	./.	1/1:10,1:10:3.01:160,3,0	1/1:4,3:6:3.01:160,3,0	0/0:25,3:25:0:0,0,0	./.	./.	0/0:26,7:32:0.47:0,0,1	0/0:12,0:11:12.03:0,12,665	0/1:9,5:11:99:625,0,100	1/1:9,6:14:15.05:800,15,0	1/1:3,2:5:4.31:317,4,0
chr10	10701229	.	TG	T	3430.45	PASS	AB=0.952;AC=47;AF=0.839;AN=56;BaseQRankSum=1.664;DP=523;FS=142.323;HRun=1;HaplotypeScore=114.8920;InbreedingCoeff=0.6562;MQ=63.45;MQ0=0;MQRankSum=10.168;QD=7.54;ReadPosRankSum=-1.942;VQSLOD=0.3043;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:28,1:29:39.53:237,40,0	1/1:6,0:6:4.07:35,4,0	0/0:8,0:8:24.02:0,24,296	0/0:14,0:14:35.05:0,35,368	0/0:23,0:23:60.09:0,60,776	1/1:19,2:21:19.91:214,20,0	1/1:8,0:8:18.13:62,18,0	1/1:31,0:31:79.94:483,80,0	1/1:20,0:20:30.13:140,30,0	1/1:15,0:15:15.80:168,16,0	1/1:22,0:22:27.77:228,28,0	1/1:13,0:13:15.27:95,15,0	1/1:16,0:16:2.65:74,3,0	1/1:10,1:11:10.42:138,10,0	1/1:19,0:18:11.56:123,12,0	1/1:20,0:20:7.49:130,7,0	1/1:17,0:17:27.31:120,27,0	1/1:18,0:18:29.74:111,30,0	1/1:19,0:19:12.80:123,13,0	1/1:36,0:36:20.20:176,20,0	1/1:8,0:8:1.67:36,2,0	1/1:27,1:28:1.20:172,1,0	0/1:19,1:20:5.35:91,0,5	1/1:9,1:10:23.44:121,23,0	0/0:23,0:23:69.06:0,69,876	1/1:23,0:23:17.15:128,17,0	1/1:24,1:25:3.09:98,3,0	1/1:20,0:20:26.04:130,26,0
chr10	10701393	.	C	CACAT	1754.57	PASS	AB=0.938;AC=24;AF=0.706;AN=34;BaseQRankSum=-0.846;DP=421;FS=15.859;HRun=0;HaplotypeScore=60.7894;InbreedingCoeff=-0.2979;MQ=46.92;MQ0=12;MQRankSum=2.738;QD=6.24;ReadPosRankSum=-0.938;VQSLOD=0.3183;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:2.96:0,3,19	./.	0/1:17,0:12:99:101,0,121	0/1:19,1:13:37.13:200,0,37	1/1:11,14:25:3.01:81,3,0	./.	./.	0/1:14,0:14:6.86:432,0,7	./.	0/1:14,12:26:99:344,0,101	1/1:21,0:21:3:25,3,0	./.	1/1:15,0:15:0.47:1,0,0	1/1:13,0:12:0.47:1,0,0	./.	./.	./.	1/1:2,0:2:5.91:38,6,0	0/1:12,0:10:19.26:96,0,19	./.	./.	1/1:22,0:22:5.99:50,6,0	1/1:23,0:23:3.01:58,3,0	./.	1/1:17,0:17:3.01:78,3,0	0/1:16,0:19:24.11:300,0,24	0/1:24,0:24:48.20:48,0,67	0/1:11,0:11:10.67:11,0,29
chr10	10701395	.	C	CAT	1287.29	PASS	AB=0.913;AC=22;AF=0.647;AN=34;BaseQRankSum=-0.559;DP=386;FS=20.147;HRun=0;HaplotypeScore=45.7006;InbreedingCoeff=-0.2954;MQ=46.78;MQ0=14;MQRankSum=2.407;QD=5.39;ReadPosRankSum=-0.941;VQSLOD=0.3551;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:14:2.96:0,3,19	./.	0/1:14,2:11:85.96:151,0,86	0/1:15,4:12:56.93:211,0,57	1/1:14,0:14:3.01:33,3,0	./.	./.	0/1:4,9:13:6.96:295,0,7	./.	0/1:13,0:13:99:104,0,114	1/1:21,0:21:3:25,3,0	./.	1/1:15,0:15:0.47:1,0,0	0/0:13,0:12:0:0,0,0	./.	./.	./.	1/1:2,0:2:5.91:38,6,0	0/1:12,0:10:21.03:96,0,21	./.	./.	1/1:22,0:22:5.99:50,6,0	1/1:13,10:23:3.01:58,3,0	./.	1/1:4,13:17:3.01:30,3,0	0/1:17,0:17:31.78:245,0,32	0/1:24,0:24:48.16:48,0,69	0/1:11,0:11:10.61:11,0,29
chr10	10701732	.	AAG	A	878.80	PASS	AB=0.748;AC=20;AF=0.400;AN=50;BaseQRankSum=4.496;DP=484;FS=10.252;HRun=0;HaplotypeScore=138.7928;InbreedingCoeff=0.0224;MQ=26.45;MQ0=12;MQRankSum=-0.793;QD=3.32;ReadPosRankSum=0.343;VQSLOD=1.9260;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:10,1:11:0:0,0,0	1/1:6,1:7:1.93:6,2,0	0/0:23,0:7:20.24:0,20,315	0/0:30,0:10:24.08:0,24,438	0/0:16,4:19:2.49:0,2,9	./.	0/0:9,1:8:2.74:0,3,12	0/1:16,6:17:95.45:95,0,685	1/1:4,5:9:2.96:31,3,0	0/1:18,7:23:99:177,0,660	0/0:11,3:13:2.37:0,2,8	0/1:9,10:19:6:47,0,6	1/1:3,15:17:6.34:23,6,0	0/0:5,15:19:7.84:0,8,32	0/0:7,23:31:9.46:0,9,78	0/1:6,16:22:7.29:7,0,9	0/0:7,3:9:5.92:0,6,54	0/1:6,3:9:99:109,0,137	0/1:10,1:7:42.24:42,0,225	0/1:22,3:26:0.14:0,0,0	0/1:35,4:35:0.02:0,0,0	0/0:14,4:18:2.31:0,2,8	./.	./.	1/1:11,3:14:2.21:7,2,0	0/1:13,12:24:99:373,0,594	0/1:2,14:16:72.52:87,0,73	1/1:2,1:3:0.47:1,0,0
chr10	10701737	.	CAT	C	559.15	PASS	AB=0.976;AC=19;AF=0.396;AN=48;BaseQRankSum=4.281;DP=563;FS=6.721;HRun=0;HaplotypeScore=151.9301;InbreedingCoeff=0.0633;MQ=25.66;MQ0=23;MQRankSum=0.530;QD=1.65;ReadPosRankSum=0.438;VQSLOD=2.2883;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:0:0,0,0	1/1:8,0:8:1.14:3,1,0	0/0:23,0:7:16.52:0,17,319	0/0:31,0:10:27.09:0,27,452	./.	./.	0/0:10,0:8:0:0,0,0	0/1:34,0:18:39.88:40,0,599	1/1:15,0:14:2.83:15,3,0	0/1:31,0:26:99:105,0,639	./.	1/1:21,0:21:5.23:38,5,0	1/1:20,0:18:8.69:37,9,0	0/0:24,0:22:7.36:0,7,32	0/0:30,1:31:9.94:0,10,83	0/1:28,0:27:7.29:7,0,9	0/0:12,0:10:2.96:0,3,39	0/1:10,0:11:88.93:89,0,141	0/1:18,0:7:34.84:35,0,228	0/1:29,0:29:0.10:0,0,0	0/1:40,4:40:0.02:0,0,0	0/1:18,0:19:0.05:0,0,0	0/0:15,0:15:2.68:0,3,11	./.	0/1:14,0:14:0.31:0,0,0	0/1:29,0:26:99:271,0,537	0/1:16,2:18:42.85:43,0,83	0/0:4,1:5:4.20:0,4,16
chr10	10701743	.	T	TAC	1600.59	PASS	AB=0.868;AC=17;AF=0.327;AN=52;BaseQRankSum=-2.834;DP=680;FS=1.233;HRun=0;HaplotypeScore=176.2354;InbreedingCoeff=0.0665;MQ=24.95;MQ0=34;MQRankSum=0.444;QD=4.10;ReadPosRankSum=2.338;VQSLOD=2.7899;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/0:8,3:11:5.24:0,5,21	0/0:25,0:7:20.98:0,21,250	0/0:35,0:11:32.43:0,32,368	0/1:20,0:21:0:0,0,0	0/0:3,0:3:0:0,0,0	0/0:14,0:12:0:0,0,0	0/1:41,5:24:88.29:315,0,88	0/0:23,0:19:2.68:0,3,11	0/1:30,11:32:25.71:608,0,26	0/1:16,4:18:0:0,0,0	0/0:19,3:22:7.52:0,8,44	0/0:19,2:19:4.29:0,4,14	0/0:24,3:24:5.84:0,6,16	0/1:28,6:34:2.71:46,0,3	0/0:29,7:32:7.10:0,7,29	1/1:13,2:14:4.91:38,5,0	0/1:11,2:12:69.07:71,0,69	0/1:22,2:8:51.18:102,0,51	1/1:19,11:30:2.01:9,2,0	0/1:35,11:42:0:1,0,0	0/1:22,4:25:0.14:0,0,0	0/0:11,8:19:1.81:0,2,5	./.	1/1:7,0:13:1.55:4,2,0	0/1:24,9:29:74.18:440,0,74	0/1:17,2:20:78.05:88,0,78	0/0:7,0:7:3.69:0,4,12
chr10	10701745	.	C	CAT	877.30	PASS	AB=0.989;AC=15;AF=0.300;AN=50;BaseQRankSum=0.212;DP=711;FS=0.000;HRun=0;HaplotypeScore=188.2279;InbreedingCoeff=0.0211;MQ=24.83;MQ0=37;MQRankSum=0.789;QD=2.52;ReadPosRankSum=4.737;VQSLOD=2.4328;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:11,0:11:5.50:0,5,36	0/0:25,0:7:20.81:0,21,288	0/0:37,0:11:33.11:0,33,471	0/1:23,2:22:0:0,0,0	0/0:3,0:3:0:0,0,0	0/0:15,1:12:0:0,0,0	0/1:47,0:24:99:173,0,163	1/1:22,0:18:2.22:7,2,0	0/1:43,0:34:67.68:395,0,68	./.	0/0:23,0:22:8.08:0,8,54	0/0:23,0:20:7.89:0,8,42	0/0:32,0:28:4.18:0,4,14	0/1:34,1:34:12.09:12,0,12	0/0:38,0:32:7.10:0,7,29	1/1:17,0:15:4.11:19,4,0	0/1:14,0:12:65.78:66,0,77	0/1:25,0:8:39.56:40,0,86	0/0:29,0:29:3.55:0,4,8	0/1:50,0:45:0:1,0,0	0/0:26,1:25:2.61:0,3,13	0/0:21,0:19:1.81:0,2,5	./.	1/1:17,0:14:1.23:3,1,0	0/1:33,0:28:99:239,0,160	0/1:20,0:20:46.22:46,0,88	0/0:7,0:7:4.16:0,4,12
chr10	10701751	.	CAT	C	286.58	PASS	AB=0.987;AC=26;AF=0.481;AN=54;BaseQRankSum=3.196;DP=777;FS=12.477;HRun=0;HaplotypeScore=192.8170;InbreedingCoeff=-0.0687;MQ=25.02;MQ0=43;MQRankSum=1.321;QD=0.47;ReadPosRankSum=-2.690;VQSLOD=1.6182;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:23:0.04:0,0,0	0/1:11,0:11:2.25:7,0,2	0/1:27,0:9:4.55:5,0,253	0/0:38,0:12:26.84:0,27,379	1/1:30,1:26:2.28:9,2,0	0/0:3,0:3:0.47:0,0,1	0/0:19,0:13:0:0,0,0	0/1:49,0:23:15.60:16,0,124	1/1:24,1:21:2.96:45,3,0	0/1:40,5:35:99:121,0,224	1/1:20,2:20:2.97:21,3,0	0/1:27,0:25:0.05:0,0,14	0/1:26,0:22:3.16:16,0,3	0/0:36,0:31:6.84:0,7,50	0/1:37,0:35:7.04:7,0,26	0/1:38,2:34:5.55:6,0,20	0/1:20,0:18:6.35:6,0,13	0/1:17,1:15:49.03:49,0,53	0/1:28,0:8:3.75:4,0,94	1/1:29,0:29:3.82:12,4,0	0/1:55,0:49:0.02:0,0,0	0/0:28,1:25:0.42:0,0,1	0/1:24,0:22:2.47:31,0,2	./.	1/1:21,0:17:6.94:28,7,0	0/1:34,0:29:27.93:28,0,185	0/1:19,0:18:1.21:1,0,69	0/0:7,0:7:1.97:0,2,13
chr10	10701753	.	TAC	T	636.17	PASS	AB=0.926;AC=27;AF=0.519;AN=52;BaseQRankSum=2.808;DP=795;FS=1.853;HRun=0;HaplotypeScore=198.5731;InbreedingCoeff=0.0501;MQ=25.13;MQ0=44;MQRankSum=1.740;QD=1.08;ReadPosRankSum=-0.879;VQSLOD=2.4347;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:21,2:22:0.04:0,0,0	1/1:8,1:10:5.32:23,5,0	0/0:27,2:10:9:0,9,187	0/0:36,2:13:32.72:0,33,241	1/1:28,3:27:5.79:57,6,0	./.	0/0:18,1:13:0:0,0,0	0/1:43,0:22:60.07:60,0,150	1/1:21,3:21:2.95:28,3,0	0/1:40,4:36:99:137,0,341	1/1:21,2:21:0.46:29,0,0	1/1:29,1:28:6.21:22,6,0	1/1:20,4:21:4.40:18,4,0	0/0:31,3:30:6.51:0,7,48	0/0:35,4:36:8.15:0,8,37	0/1:37,3:36:5.58:6,0,20	0/1:20,0:18:0.70:1,0,14	0/1:19,0:16:41.05:53,0,41	0/1:27,0:8:8.83:9,0,92	0/1:25,2:29:0.23:28,0,0	0/1:53,0:48:0.02:0,0,0	0/1:22,6:25:0.05:0,0,0	0/1:26,1:25:2.39:57,0,2	./.	1/1:22,0:18:7.21:93,7,0	0/1:29,6:30:99:100,0,249	0/1:18,4:21:53.60:54,0,74	0/0:6,0:6:2.34:0,2,13
chr10	10701755	.	C	CAT	268.27	PASS	AB=0.991;AC=20;AF=0.370;AN=54;BaseQRankSum=0.685;DP=840;FS=15.750;HRun=0;HaplotypeScore=231.6014;InbreedingCoeff=0.1161;MQ=25.13;MQ0=48;MQRankSum=3.447;QD=0.57;ReadPosRankSum=-3.094;VQSLOD=0.7520;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,1:23:0.89:0,1,2	0/0:13,0:12:0.85:0,1,6	0/0:32,0:10:29.56:0,30,315	0/0:42,0:15:38:0,38,417	1/1:35,1:31:12.03:109,12,0	1/1:4,0:3:0.47:1,0,0	0/0:18,1:13:0:0,0,0	0/1:50,0:22:6.25:6,0,210	0/0:27,0:23:2.68:0,3,11	0/1:46,0:36:27.56:28,0,162	1/1:23,0:21:5.87:36,6,0	0/1:31,0:28:2.45:2,0,4	0/0:27,0:23:3.62:0,4,12	0/1:37,0:31:1.13:7,0,1	0/0:42,0:39:3.62:0,4,14	0/0:42,0:36:4.19:0,4,22	0/1:19,2:19:14.91:15,0,16	0/1:21,0:16:5.71:6,0,68	0/0:30,0:9:12.91:0,13,107	0/1:35,0:34:19.31:23,0,19	0/1:56,0:51:0.04:0,0,0	0/0:31,0:26:2.75:0,3,18	1/1:27,0:25:2.88:39,3,0	./.	1/1:20,2:18:7.20:117,7,0	0/1:37,0:32:5.28:5,0,81	0/1:22,0:21:10.98:11,0,48	0/0:6,0:6:3.82:0,4,12
chr10	10701757	.	C	CACAT	646.62	PASS	AB=0.994;AC=24;AF=0.444;AN=54;BaseQRankSum=4.606;DP=866;FS=2.857;HRun=0;HaplotypeScore=258.6589;InbreedingCoeff=-0.0726;MQ=25.23;MQ0=52;MQRankSum=0.759;QD=1.19;ReadPosRankSum=1.157;VQSLOD=2.2522;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:23:0.89:2,1,0	1/1:13,0:12:3.29:17,3,0	0/0:35,0:10:25.54:0,26,310	0/0:45,0:16:41.87:0,42,485	0/1:35,1:32:8.91:9,0,31	1/1:4,0:3:0.47:1,0,0	1/1:21,1:16:0.89:2,1,0	0/1:50,0:22:99:101,0,165	0/0:27,0:23:4.39:0,4,15	0/1:49,0:39:99:166,0,163	0/1:23,0:21:0.28:0,0,1	1/1:33,0:30:3.72:30,4,0	0/0:28,0:24:3.94:0,4,10	0/1:38,0:31:5.14:5,0,27	0/1:42,0:40:26.69:74,0,27	0/0:43,0:37:2.80:0,3,9	0/0:20,1:19:10.15:0,10,85	0/1:23,0:18:18.51:75,0,19	0/1:29,0:9:25.82:26,0,62	0/1:34,0:33:5.59:6,0,42	0/0:59,0:52:3.47:0,3,19	1/1:31,2:28:1.06:3,1,0	0/1:27,0:25:6.40:13,0,6	./.	0/0:21,1:18:4.54:0,5,38	0/1:39,0:34:99:174,0,189	0/1:22,0:21:2.73:77,0,3	0/0:6,0:6:3.87:0,4,25
chr10	10701759	.	C	CAT	574.33	PASS	AB=0.976;AC=20;AF=0.370;AN=54;BaseQRankSum=0.059;DP=897;FS=25.506;HRun=0;HaplotypeScore=236.6416;InbreedingCoeff=-0.1284;MQ=25.69;MQ0=53;MQRankSum=1.598;QD=1.16;ReadPosRankSum=0.484;VQSLOD=0.6526;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:23:0:0,0,0	0/0:12,1:12:1.08:0,1,7	0/0:36,0:11:29.78:0,30,310	0/0:46,0:17:44.33:0,44,519	0/1:38,0:33:4.19:4,0,18	1/1:8,0:7:0.43:0,0,0	1/1:23,0:16:2.79:24,3,0	0/1:50,1:22:41.21:41,0,134	0/0:28,0:23:3:0,3,25	0/1:50,0:40:99:132,0,107	1/1:23,2:23:2.40:37,2,0	0/1:34,0:31:8.19:11,0,8	0/1:27,0:23:7.74:12,0,8	0/0:37,1:31:6.36:0,6,55	0/0:42,2:41:10.50:0,11,44	0/0:44,0:38:11.43:0,11,69	0/1:20,1:19:13.22:13,0,25	0/1:23,1:19:23.23:102,0,23	0/1:30,0:10:10.73:11,0,38	0/1:34,0:34:4.02:57,0,4	0/0:62,1:56:3.81:0,4,13	1/1:37,0:32:0.96:18,1,0	0/1:25,2:25:7.48:53,0,7	./.	0/0:21,0:18:1.25:0,1,31	0/1:40,1:36:60.88:163,0,61	0/1:22,1:22:16.34:32,0,16	0/0:6,0:6:4.41:0,4,14
chr10	10701763	.	CAT	C	1226.45	PASS	AB=0.995;AC=35;AF=0.648;AN=54;BaseQRankSum=-1.491;DP=940;FS=22.449;HRun=0;HaplotypeScore=233.4158;InbreedingCoeff=-0.0528;MQ=26.58;MQ0=54;MQRankSum=2.741;QD=1.51;ReadPosRankSum=-1.270;VQSLOD=0.9852;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:24:0.04:0,0,0	1/1:13,0:12:5.62:34,6,0	0/0:33,2:11:1.03:0,1,186	0/0:46,0:19:14.65:0,15,199	0/1:39,1:35:0.66:1,0,39	1/1:9,0:8:2.29:22,2,0	1/1:25,0:17:2.73:24,3,0	0/1:48,0:20:7.43:7,0,126	1/1:30,0:25:5.84:38,6,0	0/1:52,0:42:99:221,0,203	1/1:26,0:24:9.42:91,9,0	0/1:33,0:29:6.66:11,0,7	1/1:32,0:26:11.08:97,11,0	0/1:41,0:33:27.79:28,0,36	0/1:46,0:43:12.65:13,0,18	0/1:47,0:41:5.78:6,0,46	1/1:20,2:20:8.81:49,9,0	1/1:21,3:19:6.77:118,7,0	0/1:28,0:10:11.86:12,0,67	1/1:37,1:37:21.74:149,22,0	1/1:69,1:61:4.63:41,5,0	1/1:37,1:32:11.51:93,12,0	0/1:29,0:27:6.33:66,0,6	./.	0/1:26,0:22:10.17:10,0,31	0/1:42,1:36:82.03:209,0,82	0/1:23,0:22:37.01:37,0,53	0/0:5,0:5:5.67:0,6,20
chr10	10701765	.	TAC	T	693.42	PASS	AB=0.904;AC=28;AF=0.519;AN=54;BaseQRankSum=-1.333;DP=951;FS=1.344;HRun=0;HaplotypeScore=239.2022;InbreedingCoeff=0.0188;MQ=27.04;MQ0=55;MQRankSum=0.667;QD=1.01;ReadPosRankSum=0.360;VQSLOD=2.6582;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:21,3:24:0.04:0,0,0	1/1:9,3:12:4.45:17,4,0	0/0:30,1:10:17.06:0,17,218	0/0:48,0:19:26.11:0,26,347	0/0:29,10:34:11.88:0,12,131	1/1:9,0:8:2.37:8,2,0	0/0:23,2:17:0.47:0,0,2	0/1:47,0:18:5.06:5,0,129	1/1:30,0:26:1.40:6,1,0	0/1:49,5:45:99:250,0,142	1/1:25,2:25:5.35:24,5,0	0/1:29,4:31:4.24:4,0,26	0/1:30,1:26:10.83:11,0,22	1/1:41,2:34:0.53:11,1,0	0/1:42,4:44:15:15,0,16	0/0:42,2:40:2.91:0,3,55	1/1:21,0:20:5.84:35,6,0	0/1:23,1:19:32.16:114,0,32	0/1:26,2:10:19.37:19,0,40	1/1:28,10:37:21.87:82,22,0	0/1:62,9:63:4.45:4,0,9	1/1:34,3:32:9.27:32,9,0	0/1:30,1:29:17.60:18,0,28	./.	0/0:22,5:22:14.62:0,15,120	0/1:37,6:38:65.60:162,0,66	0/1:19,4:22:30.14:30,0,33	0/0:5,0:5:7.66:0,8,33
chr10	10701769	.	C	CACACAT	6605.81	PASS	AB=0.937;AC=36;AF=0.643;AN=56;BaseQRankSum=-5.152;DP=990;FS=20.774;HRun=0;HaplotypeScore=266.9723;InbreedingCoeff=0.2636;MQ=27.80;MQ0=56;MQRankSum=2.315;QD=7.92;ReadPosRankSum=2.968;VQSLOD=2.1791;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:25,4:26:1.62:21,2,0	0/1:12,1:12:2.24:42,0,2	0/0:33,0:11:23.65:0,24,289	0/0:50,0:20:25.28:0,25,453	0/0:40,0:35:11.49:0,11,193	1/1:10,0:8:2.76:47,3,0	1/1:26,1:18:5.97:91,6,0	0/1:47,0:19:99:120,0,122	0/1:28,3:27:3.03:41,0,3	1/1:48,9:47:29.77:1788,30,0	1/1:23,5:26:15.87:286,16,0	1/1:36,1:31:5.95:110,6,0	1/1:31,1:26:13.92:231,14,0	0/1:43,1:35:3.06:69,0,3	0/1:52,0:48:15.60:52,0,16	0/1:44,3:41:15.39:45,0,15	0/1:22,1:21:0.73:90,0,1	1/1:20,1:17:17.99:451,18,0	0/1:27,1:10:4.42:215,0,4	1/1:32,5:36:29.92:621,30,0	1/1:72,2:65:9.14:153,9,0	1/1:35,6:35:12.72:230,13,0	0/1:25,9:32:9.85:255,0,10	0/1:40,4:40:0.05:0,0,0	0/0:28,0:23:15.32:0,15,212	1/1:44,5:42:36.32:1300,36,0	1/1:23,2:24:9.16:349,9,0	0/0:5,0:5:4.48:0,4,20
chr10	10701775	.	CAT	C	37.72	PASS	AB=0.988;AC=8;AF=0.148;AN=54;BaseQRankSum=5.631;DP=1005;FS=41.191;HRun=0;HaplotypeScore=246.7237;InbreedingCoeff=0.0244;MQ=28.45;MQ0=50;MQRankSum=-4.072;QD=0.17;ReadPosRankSum=0.951;VQSLOD=1.3362;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:27:2.95:0,3,24	1/1:12,1:12:5.61:33,6,0	0/0:30,0:9:23.73:0,24,232	0/0:39,1:14:19.31:0,19,480	0/0:40,1:36:14.82:0,15,225	0/0:12,0:9:2.54:0,3,14	0/0:28,0:19:9.01:0,9,87	0/0:52,0:24:32.13:0,32,451	0/0:37,1:34:11.74:0,12,80	0/1:60,0:49:76.63:77,0,406	0/0:27,0:25:21.92:0,22,141	0/0:38,4:35:15.26:0,15,113	0/1:32,1:27:6.54:7,0,105	0/0:42,4:36:2.30:0,2,18	0/0:47,3:46:12.71:0,13,69	0/0:44,1:39:15.07:0,15,103	0/1:24,0:22:5.82:6,0,24	0/1:23,1:19:15.49:15,0,143	0/0:24,0:12:16.89:0,17,119	0/0:38,1:39:36.26:0,36,203	0/0:77,0:67:24.16:0,24,200	0/0:37,2:33:17.70:0,18,143	0/0:36,1:35:23.09:0,23,165	./.	0/0:28,0:23:15.52:0,16,236	0/1:47,0:40:14.43:14,0,411	0/1:25,0:24:8.65:9,0,129	0/0:6,0:6:7.75:0,8,37
chr10	10701782	.	ACATACG	A	213.26	PASS	AB=0.988;AC=8;AF=0.143;AN=56;BaseQRankSum=8.378;DP=1073;FS=56.170;HRun=0;HaplotypeScore=284.0407;InbreedingCoeff=-0.0155;MQ=30.09;MQ0=45;MQRankSum=-6.751;QD=1.03;ReadPosRankSum=0.348;VQSLOD=0.4700;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:26:2.93:0,3,97	0/1:15,0:14:35.34:35,0,104	0/0:36,0:12:32.21:0,32,715	0/0:37,0:15:32.29:0,32,966	0/0:40,0:36:14.38:0,14,442	0/0:11,0:8:2.97:0,3,77	0/0:32,0:21:9.01:0,9,258	0/0:52,0:29:58.22:0,58,1637	0/0:38,0:34:11.88:0,12,304	0/0:60,0:51:8.93:0,9,1787	0/0:28,0:26:23.93:0,24,632	0/0:48,0:41:19.64:0,20,639	0/0:39,0:29:15.35:0,15,442	0/0:48,0:38:4.43:0,4,233	0/1:53,0:48:20.64:21,0,272	0/0:46,1:42:8.11:0,8,164	0/1:24,1:23:56.06:56,0,76	0/1:27,1:23:45.97:46,0,492	0/0:22,1:14:6.06:0,6,325	0/0:44,0:43:50.05:0,50,1251	0/0:90,0:79:45.80:0,46,1088	0/0:40,0:34:23.92:0,24,635	0/0:38,0:36:34.59:0,35,789	0/0:47,1:43:2.90:0,3,56	0/0:36,0:31:13.16:0,13,485	0/1:52,0:45:47.10:47,0,1856	0/1:28,0:27:90.93:91,0,372	1/1:6,0:6:5.95:49,6,0
chr10	10701784	.	ATACG	A	56.32	PASS	AB=0.990;AC=8;AF=0.143;AN=56;BaseQRankSum=9.053;DP=1084;FS=46.109;HRun=0;HaplotypeScore=273.8734;InbreedingCoeff=-0.0218;MQ=30.49;MQ0=45;MQRankSum=-6.070;QD=0.27;ReadPosRankSum=0.738;VQSLOD=1.2330;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,1:25:2.78:0,3,68	0/1:14,1:14:59.97:60,0,117	0/0:37,0:15:41.50:0,42,820	0/0:38,0:15:32.29:0,32,860	0/0:40,0:36:14.18:0,14,413	0/0:11,0:8:2.67:0,3,48	0/0:31,0:20:9.03:0,9,202	0/0:55,0:31:59.39:0,59,1608	0/0:38,0:34:11.52:0,12,229	0/1:61,0:52:17.70:18,0,1316	0/0:27,0:25:23.93:0,24,529	0/0:49,1:43:21.92:0,22,616	0/0:41,0:31:17.62:0,18,297	0/0:47,1:38:10.13:0,10,208	0/0:55,1:51:17.45:0,17,323	0/0:43,3:40:9.92:0,10,110	0/1:25,0:23:23.12:23,0,36	0/1:28,0:23:31.67:32,0,428	0/1:22,0:13:14.35:14,0,274	0/0:45,0:44:51.84:0,52,1043	0/0:92,1:82:51.76:0,52,933	0/0:39,0:33:23.34:0,23,451	0/0:37,0:36:29.52:0,30,653	0/0:48,0:43:5.91:0,6,82	0/0:36,0:31:13.56:0,14,433	0/1:53,0:46:26.59:27,0,1342	0/0:27,1:27:8.04:0,8,265	1/1:6,0:6:3.35:11,3,0
chr10	10701786	.	ACG	A	561.42	PASS	AB=0.926;AC=10;AF=0.179;AN=56;BaseQRankSum=9.763;DP=1087;FS=71.040;HRun=0;HaplotypeScore=262.1155;InbreedingCoeff=-0.2257;MQ=30.91;MQ0=38;MQRankSum=-7.580;QD=1.78;ReadPosRankSum=-0.575;VQSLOD=-0.1520;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,4:26:2.80:0,3,58	0/1:13,2:14:20.30:20,0,104	0/0:39,0:17:41.15:0,41,718	0/0:41,0:17:32.27:0,32,669	0/0:39,2:37:14.02:0,14,284	0/0:11,0:8:2.68:0,3,58	0/0:29,1:20:9.03:0,9,173	0/0:44,1:29:53.42:0,53,1383	0/1:33,6:35:1.12:1,0,162	0/1:61,3:55:99:160,0,1447	0/0:26,1:25:25.49:0,25,467	0/0:46,3:43:31.22:0,31,583	0/0:40,2:32:11.87:0,12,389	0/0:45,5:39:10.59:0,11,231	0/0:50,5:50:10.95:0,11,426	0/0:45,3:42:5.74:0,6,115	0/1:23,2:23:45.57:46,0,46	0/1:19,9:23:99:270,0,379	0/1:20,1:14:65.49:65,0,216	0/0:40,4:43:52.54:0,53,1034	0/0:82,13:84:57.13:0,57,990	0/0:35,2:31:23.62:0,24,454	0/0:36,2:36:29.51:0,30,578	0/0:41,7:43:5.91:0,6,110	0/1:34,1:30:0.65:1,0,271	0/1:53,3:49:80.81:81,0,1395	0/1:28,0:27:41.33:41,0,223	0/1:5,0:5:5.64:6,0,21
chr10	10701791	.	C	CAT	56.14	PASS	AB=0.958;AC=6;AF=0.107;AN=56;BaseQRankSum=7.549;DP=1141;FS=37.966;HRun=0;HaplotypeScore=284.1089;InbreedingCoeff=-0.1446;MQ=31.80;MQ0=30;MQRankSum=-5.093;QD=0.27;ReadPosRankSum=-1.477;VQSLOD=1.4582;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:26:3.01:0,3,46	0/0:14,0:14:7.72:0,8,100	0/0:42,0:17:48.09:0,48,681	0/0:44,1:16:22.29:0,22,540	0/0:39,0:34:5.30:0,5,216	0/0:9,0:7:3.01:0,3,45	0/0:28,0:19:8.68:0,9,137	0/0:44,0:33:84.67:0,85,1248	0/0:40,0:36:11.06:0,11,144	0/1:67,0:58:0.24:0,0,1426	0/0:28,0:27:31.64:0,32,441	0/0:52,2:46:29.71:0,30,458	0/0:42,1:32:23.48:0,23,331	0/0:49,2:40:12.64:0,13,213	0/0:62,1:57:28.99:0,29,430	0/0:50,4:48:9.05:0,9,136	0/1:26,0:24:35.66:36,0,62	0/1:31,0:26:11.11:11,0,450	0/1:20,0:14:52.18:52,0,203	0/0:48,0:47:66.16:0,66,958	0/0:99,0:89:60.97:0,61,862	0/0:44,0:36:30.07:0,30,416	0/0:41,1:40:36.50:0,37,528	0/0:46,1:42:6.02:0,6,92	0/0:34,2:31:14.09:0,14,228	0/1:57,0:51:46.65:47,0,1259	0/0:27,2:28:25.61:0,26,316	0/1:4,2:6:23.93:24,0,31
chr10	10701800	.	ATACATG	A	308.70	PASS	AB=0.959;AC=8;AF=0.143;AN=56;BaseQRankSum=9.282;DP=1183;FS=68.784;HRun=0;HaplotypeScore=297.8892;InbreedingCoeff=-0.1909;MQ=32.70;MQ0=27;MQRankSum=-7.250;QD=1.11;ReadPosRankSum=-1.058;VQSLOD=-0.0624;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,1:30:5.94:0,6,162	0/1:12,0:11:16.83:17,0,217	0/0:46,0:19:57.13:0,57,1537	0/0:51,0:21:54.02:0,54,1337	0/0:34,0:29:14.72:0,15,562	0/0:11,0:8:3.44:0,3,113	0/0:29,1:20:11.87:0,12,413	0/0:44,0:39:99:0,114,3818	0/0:39,1:35:8.42:0,8,338	0/1:63,2:57:99:145,0,3704	0/0:29,0:27:32.94:0,33,1167	0/0:58,0:50:33.04:0,33,1176	0/1:45,0:36:23.37:23,0,871	0/0:52,0:42:10.20:0,10,586	0/0:63,0:58:33.66:0,34,1225	0/0:52,1:47:20.02:0,20,599	0/1:31,1:30:34.85:35,0,426	0/1:34,0:30:77.58:78,0,1026	0/0:23,0:16:36.11:0,36,829	0/0:48,0:47:89.49:0,89,3010	0/0:105,1:95:65.56:0,66,2294	0/0:45,0:36:35.77:0,36,1222	0/0:45,1:45:58.67:0,59,1766	0/0:51,0:46:9.03:0,9,274	0/0:35,0:31:12.24:0,12,560	0/1:53,1:49:40.84:41,0,3390	0/1:28,0:27:51.53:52,0,730	0/1:4,2:6:52.57:53,0,101
chr10	10701827	.	C	CACACACAT	1030.26	PASS	AB=0.978;AC=13;AF=0.241;AN=54;BaseQRankSum=2.354;DP=1487;FS=38.811;HRun=0;HaplotypeScore=362.2388;InbreedingCoeff=0.3726;MQ=32.45;MQ0=84;MQRankSum=-3.127;QD=2.43;ReadPosRankSum=-3.856;VQSLOD=0.8966;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:38:5.88:0,6,37	0/0:12,0:11:11.78:0,12,74	0/0:53,0:13:15.05:0,15,301	./.	0/1:36,5:32:28.52:289,0,29	1/1:14,1:12:3:63,3,0	1/1:35,0:23:5.37:91,5,0	0/0:57,0:41:20.72:0,21,159	1/1:49,1:41:9.03:228,9,0	0/1:87,0:74:47.75:48,0,685	0/0:28,0:24:35.86:0,36,227	0/0:80,0:70:13.54:0,14,207	0/1:63,0:51:13.69:14,0,102	0/0:61,0:50:18.89:0,19,136	0/0:84,0:76:41.51:0,42,273	0/0:70,0:59:30.34:0,30,187	0/1:40,0:37:45.17:45,0,216	0/1:46,0:37:86.04:86,0,266	0/0:36,0:24:34.79:0,35,216	0/0:52,0:50:96.28:0,96,615	0/0:135,0:115:82.31:0,82,521	0/0:58,0:46:43.77:0,44,274	0/0:52,0:50:64.54:0,65,399	0/0:65,0:55:9.71:0,10,56	1/1:36,10:40:18.05:325,18,0	0/0:67,0:55:81.36:0,81,643	0/0:39,0:38:29.63:0,30,180	0/0:15,0:14:23.55:0,24,145
chr10	10701843	.	T	TAC	14426.72	PASS	AB=0.738;AC=39;AF=0.696;AN=56;BaseQRankSum=-6.320;DP=1488;FS=26.501;HRun=0;HaplotypeScore=227.2416;InbreedingCoeff=0.5309;MQ=32.21;MQ0=111;MQRankSum=5.634;QD=12.14;ReadPosRankSum=8.810;VQSLOD=2.6129;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:31,19:37:6.02:102,6,0	1/1:6,3:6:7.06:150,7,0	0/0:50,0:11:24.02:0,24,274	0/0:46,0:8:11.97:0,12,132	0/0:42,0:36:3.09:0,3,230	0/0:21,0:17:7.45:0,7,53	0/0:42,0:28:14.55:0,15,124	1/1:63,2:33:12.78:348,13,0	0/0:42,0:40:8.39:0,8,40	0/1:56,31:71:99:1654,0,120	1/1:17,9:21:33.32:578,33,0	1/1:41,38:69:28.23:649,28,0	1/1:34,26:50:2:380,2,0	1/1:35,24:47:21.07:344,21,0	1/1:42,45:77:44.58:760,45,0	1/1:29,37:56:30.10:505,30,0	0/1:22,15:34:60.70:459,0,61	0/1:32,14:37:99:545,0,121	1/1:29,10:24:0.12:514,0,0	1/1:20,25:42:99:1622,99,0	1/1:98,46:110:84.29:1405,84,0	1/1:37,18:43:50.64:814,51,0	1/1:24,21:43:63.22:1061,63,0	1/1:43,23:53:9.03:153,9,0	0/0:38,0:40:0.51:0,1,195	1/1:39,25:51:40.50:1528,40,0	1/1:22,17:38:24.36:394,24,0	1/1:5,9:13:27.98:461,28,0
chr10	10701905	.	CACAT	C	285.56	PASS	AB=0.988;AC=15;AF=0.288;AN=52;BaseQRankSum=3.484;DP=1833;FS=8.319;HRun=0;HaplotypeScore=257.5694;InbreedingCoeff=-0.2766;MQ=25.38;MQ0=233;MQRankSum=0.938;QD=0.28;ReadPosRankSum=-6.445;VQSLOD=-0.5656;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:63,2:47:0.71:0,1,201	0/1:22,0:11:10.35:10,0,122	./.	./.	0/0:77,0:61:48.15:0,48,1147	0/0:41,0:29:3.49:0,3,109	0/0:73,0:37:8.63:0,9,87	0/0:90,0:16:30.37:0,30,678	0/0:66,0:50:3.01:0,3,61	0/1:129,0:76:64.55:65,0,1849	0/1:45,1:34:18.15:18,0,31	0/1:88,1:69:18.74:32,0,19	0/1:66,0:42:25.15:25,0,373	0/1:91,2:66:5.42:5,0,316	1/1:105,2:70:8.84:71,9,0	0/1:83,2:62:15.09:15,0,93	0/0:60,1:48:49.99:0,50,816	0/0:59,0:47:57.51:0,58,1438	0/1:55,1:31:35.68:36,0,409	0/1:35,0:30:19.11:19,0,20	0/1:164,4:110:67.80:68,0,531	0/0:70,0:50:6.80:0,7,57	0/1:54,1:43:31.85:32,0,117	0/0:73,2:56:8.24:0,8,168	0/0:63,0:54:66.20:0,66,1646	0/0:70,0:42:17.75:0,18,983	0/1:37,1:28:28.55:29,0,63	0/1:29,0:24:7.11:7,0,269
chr10	10701919	.	T	TAC	316.86	PASS	AB=0.977;AC=15;AF=0.288;AN=52;BaseQRankSum=1.377;DP=1868;FS=7.357;HRun=0;HaplotypeScore=232.5034;InbreedingCoeff=0.0699;MQ=24.11;MQ0=246;MQRankSum=-2.752;QD=0.38;ReadPosRankSum=-2.227;VQSLOD=1.4931;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:69,2:50:13.70:0,14,147	0/0:23,2:12:6:0,6,61	./.	./.	0/0:71,4:60:39.04:0,39,532	1/1:41,3:33:0.43:50,0,0	1/1:68,0:30:1.53:4,2,0	0/0:80,0:14:11.85:0,12,112	1/1:70,0:52:2.50:9,2,0	0/1:126,4:75:99:167,0,717	0/0:46,3:37:2.91:0,3,41	0/0:88,5:71:6.21:0,6,70	0/0:64,1:40:0.13:0,0,128	0/0:92,3:68:18.23:0,18,131	0/1:105,2:69:0.04:0,0,1	0/0:86,5:68:5.76:0,6,39	0/0:62,1:48:43.10:0,43,390	0/0:65,0:52:12.61:0,13,716	0/1:49,0:27:15.43:15,0,124	0/1:38,5:37:14.24:14,0,18	0/0:177,1:111:26.37:0,26,206	0/1:70,0:46:0:0,0,0	0/1:57,1:43:11.97:44,0,12	0/1:72,0:52:3.15:3,0,28	0/0:64,1:55:66.05:0,66,813	0/1:76,3:52:99:112,0,319	0/1:35,0:22:6.92:25,0,7	0/0:25,0:20:11.86:0,12,80
chr10	10701933	.	CAT	C	56.12	PASS	AB=0.995;AC=11;AF=0.212;AN=52;BaseQRankSum=1.894;DP=1975;FS=13.724;HRun=0;HaplotypeScore=253.8264;InbreedingCoeff=0.0807;MQ=24.41;MQ0=270;MQRankSum=3.627;QD=0.07;ReadPosRankSum=-6.541;VQSLOD=-0.1316;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:65,0:49:4.34:0,4,221	0/0:25,0:13:1.78:0,2,69	./.	./.	0/0:76,0:60:30.48:0,30,540	0/0:45,0:33:8.51:0,9,62	0/0:84,0:40:5.66:0,6,53	0/0:84,0:22:53.86:0,54,611	0/1:77,0:59:16.22:16,0,46	0/0:154,0:90:96.17:0,96,1832	0/0:55,0:40:6.96:0,7,103	0/1:97,0:73:25.45:25,0,93	0/1:70,0:43:5.91:6,0,274	0/1:101,0:69:10.97:11,0,253	1/1:109,0:71:10.82:58,11,0	0/1:96,1:75:35.20:35,0,84	0/0:66,0:51:30.07:0,30,720	0/0:69,0:54:76.13:0,76,1652	0/0:49,0:29:10.78:0,11,430	0/0:47,0:40:15.05:0,15,253	0/0:181,3:120:24.18:0,24,520	1/1:68,0:46:4.98:22,5,0	0/1:62,0:46:3.40:3,0,80	0/1:73,2:55:16.51:17,0,102	0/0:64,0:52:54.18:0,54,1040	0/0:89,0:52:30.54:0,31,1055	0/0:38,0:23:18.46:0,18,212	0/0:22,0:18:2.63:0,3,192
chr10	10701935	.	TAC	T	764.77	PASS	AB=0.960;AC=18;AF=0.346;AN=52;BaseQRankSum=-0.881;DP=1996;FS=15.115;HRun=0;HaplotypeScore=250.1579;InbreedingCoeff=-0.2852;MQ=24.32;MQ0=283;MQRankSum=4.177;QD=0.56;ReadPosRankSum=-7.047;VQSLOD=-0.2328;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:63,3:49:18.34:18,0,144	0/0:25,0:13:2.94:0,3,52	./.	./.	0/0:78,0:60:27.50:0,28,460	0/1:44,1:33:7.98:8,0,41	0/0:87,0:42:5.66:0,6,61	0/0:92,0:23:50.68:0,51,742	0/1:71,6:58:34.79:86,0,35	0/1:149,4:87:21.64:22,0,1730	0/0:56,0:40:6.92:0,7,72	0/1:96,2:74:81.57:111,0,82	0/1:67,3:43:52.83:53,0,265	0/1:99,2:69:17.98:18,0,214	1/1:101,7:70:14.53:154,15,0	0/1:89,8:75:99:124,0,104	0/0:66,1:52:2.69:0,3,555	0/0:68,1:55:35.83:0,36,1338	0/1:47,2:28:37.63:38,0,317	0/0:42,3:39:14.84:0,15,220	0/1:178,7:120:15.99:16,0,443	1/1:68,3:47:5.50:72,6,0	0/1:58,4:46:28.12:28,0,93	0/1:74,2:57:76.91:77,0,87	0/0:64,0:52:54.18:0,54,921	0/1:88,3:52:71.21:71,0,935	0/0:38,0:23:2.86:0,3,230	0/1:21,1:18:22.30:22,0,153
chr10	10701937	.	C	CAT	190.78	PASS	AB=0.986;AC=12;AF=0.231;AN=52;BaseQRankSum=-0.504;DP=2041;FS=6.374;HRun=0;HaplotypeScore=262.4690;InbreedingCoeff=-0.0887;MQ=24.56;MQ0=289;MQRankSum=4.371;QD=0.23;ReadPosRankSum=-7.867;VQSLOD=0.2265;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:68,1:51:3.46:0,3,180	0/0:25,1:14:6.45:0,6,67	./.	./.	0/0:80,0:62:32.26:0,32,434	0/1:50,0:37:7.20:7,0,21	0/0:90,1:42:4.18:0,4,48	0/0:94,0:25:34.07:0,34,690	0/1:79,0:60:20.49:20,0,36	0/0:150,3:88:11.39:0,11,1490	0/1:55,2:41:40.92:51,0,41	0/1:98,2:76:64.06:64,0,86	0/1:71,0:44:16.32:16,0,218	0/0:101,0:70:9.58:0,10,200	0/1:109,0:72:1.14:78,0,1	0/1:101,1:79:17.28:17,0,138	0/0:65,3:53:28.43:0,28,633	0/0:68,1:55:44.62:0,45,1349	0/1:50,1:28:36.58:37,0,328	0/0:44,2:40:15.05:0,15,225	0/0:179,11:124:38.54:0,39,457	1/1:68,3:47:4.91:24,5,0	0/1:62,0:46:4.41:4,0,61	0/1:71,5:58:10.13:10,0,106	0/0:63,0:51:54.18:0,54,825	0/0:95,2:56:45.87:0,46,937	0/0:39,1:25:21.03:0,21,287	0/0:22,0:18:1.65:0,2,167
chr10	10701945	.	TACACACATAC	T	5057.47	PASS	AB=0.974;AC=26;AF=0.500;AN=52;BaseQRankSum=-7.497;DP=2126;FS=3.007;HRun=0;HaplotypeScore=323.3012;InbreedingCoeff=-0.6027;MQ=25.62;MQ0=301;MQRankSum=8.861;QD=2.70;ReadPosRankSum=-9.843;VQSLOD=1.1116;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:72,1:54:99:109,0,154	0/1:29,0:16:43.36:43,0,67	./.	./.	0/1:74,0:59:12.04:12,0,299	0/1:53,0:39:19.88:171,0,20	0/0:85,0:34:5.50:0,5,66	0/0:97,0:26:23.19:0,23,824	1/1:80,0:65:8.28:240,8,0	0/1:164,0:97:99:615,0,2123	0/1:59,0:44:84.93:89,0,85	0/1:104,3:85:67.53:411,0,68	0/1:72,3:49:99:354,0,114	0/1:99,3:74:50.40:280,0,50	1/1:121,1:79:2.82:560,3,0	0/1:96,8:82:93.88:541,0,94	0/1:66,0:54:36.02:36,0,594	0/1:72,1:59:68.98:69,0,2097	0/1:49,0:29:99:156,0,344	0/1:52,1:48:66.65:67,0,467	0/1:196,0:130:99:197,0,322	1/1:71,1:47:6.02:123,6,0	0/1:58,3:45:98.10:98,0,161	0/1:79,1:61:99:172,0,119	0/0:65,0:53:36.04:0,36,751	0/1:100,0:58:99:368,0,1105	0/1:34,3:25:99:118,0,364	0/1:25,1:22:99:230,0,107
chr10	10701953	.	TAC	T	2673.99	PASS	AB=0.997;AC=22;AF=0.423;AN=52;BaseQRankSum=-8.141;DP=2190;FS=0.404;HRun=0;HaplotypeScore=288.5416;InbreedingCoeff=-0.4369;MQ=26.96;MQ0=296;MQRankSum=9.844;QD=1.54;ReadPosRankSum=-10.740;VQSLOD=-0.3728;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:76,0:56:17.73:18,0,187	0/1:31,0:18:53.24:53,0,58	./.	./.	0/0:79,0:61:13.67:0,14,216	0/1:54,1:41:25.76:36,0,26	0/0:88,0:39:5.44:0,5,65	0/0:97,0:26:57.93:0,58,970	1/1:94,2:75:21.01:291,21,0	0/1:167,0:100:99:164,0,1691	0/1:59,0:44:34:34,0,44	0/1:113,0:91:63.10:324,0,63	0/1:78,0:52:99:224,0,126	0/1:109,0:77:99:152,0,131	0/1:125,1:82:16.95:317,0,17	0/1:112,1:90:99:402,0,128	0/1:69,0:55:8.12:8,0,684	0/0:73,1:60:21.67:0,22,1623	0/1:50,0:29:99:115,0,281	0/0:51,0:47:17.63:0,18,298	0/1:201,1:135:66.57:67,0,282	1/1:73,0:49:8.49:112,8,0	0/1:60,0:44:28.02:28,0,94	0/1:82,1:64:87.56:110,0,88	0/0:61,1:49:37.01:0,37,617	0/1:103,0:61:99:233,0,1061	0/1:42,0:29:99:116,0,272	0/1:31,0:26:30.06:30,0,126
chr10	10701955	.	C	CAT	1274.05	PASS	AB=0.990;AC=18;AF=0.346;AN=52;BaseQRankSum=-5.926;DP=2230;FS=24.837;HRun=0;HaplotypeScore=303.2586;InbreedingCoeff=-0.2936;MQ=27.36;MQ0=296;MQRankSum=10.933;QD=0.83;ReadPosRankSum=-10.404;VQSLOD=-0.7561;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:79,1:58:4.05:0,4,135	0/1:31,0:18:30.03:30,0,53	./.	./.	0/0:78,0:63:33.08:0,33,317	0/1:55,1:42:27.24:27,0,33	0/0:89,0:39:5.27:0,5,55	0/0:103,0:28:7.69:0,8,808	1/1:95,1:75:14.63:105,15,0	0/1:171,1:104:99:191,0,1556	0/1:58,1:44:35.97:36,0,39	0/1:111,3:92:31.14:171,0,31	0/1:79,2:55:99:119,0,114	0/1:112,2:81:35.60:110,0,36	0/1:132,0:87:27.13:146,0,27	0/1:114,2:93:99:225,0,107	0/0:70,0:56:23.77:0,24,635	0/0:72,2:60:9.40:0,9,1444	0/1:48,0:29:38.25:38,0,250	0/0:51,1:47:17.21:0,17,269	0/1:203,3:136:89.76:90,0,316	1/1:69,4:49:3.07:14,3,0	0/0:59,2:45:4.05:0,4,89	0/1:83,0:64:43.53:44,0,79	0/0:63,0:50:40:0,40,577	0/1:104,0:62:30.17:30,0,952	0/1:41,0:29:53.56:54,0,255	0/0:31,0:26:9.55:0,10,111
chr10	10702039	.	C	CACACACACAT	14335.15	PASS	AB=0.973;AC=47;AF=0.870;AN=54;BaseQRankSum=-3.720;DP=1344;FS=22.694;HRun=0;HaplotypeScore=354.8965;InbreedingCoeff=0.4337;MQ=35.41;MQ0=31;MQRankSum=5.168;QD=11.68;ReadPosRankSum=1.732;VQSLOD=2.2758;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:49,1:42:36.98:471,37,0	1/1:8,7:15:1.22:4,1,0	0/0:44,0:13:32.27:0,32,642	0/0:50,0:18:37.13:0,37,871	1/1:36,0:35:29.99:486,30,0	1/1:23,0:37:2.60:6,3,0	0/1:33,0:23:0.33:35,0,0	1/1:36,0:27:26.94:221,27,0	1/1:49,0:52:23.42:413,23,0	1/1:71,4:70:81.16:2344,81,0	1/1:15,3:17:3:105,3,0	1/1:83,13:87:12.62:981,13,0	1/1:55,10:61:31.19:1021,31,0	1/1:75,5:70:17.71:696,18,0	1/1:73,8:73:36.92:689,37,0	1/1:74,5:72:22.26:439,22,0	0/1:33,2:34:15.42:267,0,15	0/1:36,0:34:44.47:360,0,44	1/1:22,2:20:21.59:490,22,0	1/1:15,6:21:5.75:33,6,0	1/1:110,0:96:23.67:426,24,0	1/1:33,6:33:18.92:403,19,0	1/1:23,1:22:3.51:252,4,0	1/1:35,3:32:11.83:231,12,0	1/1:32,2:30:13.24:227,13,0	1/1:42,6:45:82.85:2060,83,0	1/1:36,9:40:56.51:1675,57,0	./.
chr10	10702045	.	CACAT	C	711.92	PASS	AB=0.997;AC=16;AF=0.286;AN=56;BaseQRankSum=1.803;DP=1312;FS=26.961;HRun=0;HaplotypeScore=331.6728;InbreedingCoeff=-0.3246;MQ=35.15;MQ0=32;MQRankSum=-1.061;QD=0.83;ReadPosRankSum=-5.313;VQSLOD=0.4469;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:42:7.91:0,8,44	0/0:13,0:13:7.47:0,7,44	0/0:40,0:13:39.05:0,39,803	0/0:48,0:18:50.11:0,50,1002	0/1:37,0:37:15.93:62,0,16	0/0:36,0:34:1.90:0,2,23	0/1:31,0:19:18.86:19,0,26	1/1:29,0:18:2.95:172,3,0	0/1:54,0:48:18.91:19,0,66	0/1:73,2:67:99:129,0,517	0/0:21,0:20:1.11:0,1,15	0/1:95,0:85:15.73:16,0,156	0/0:63,0:58:13.29:0,13,254	0/1:79,0:69:99:121,0,104	0/1:81,1:73:58.48:58,0,82	0/1:78,0:71:35.97:52,0,36	0/1:35,0:34:74.68:75,0,149	0/1:37,0:34:87.43:87,0,136	0/1:29,0:22:3:3,0,179	0/0:17,0:17:1.88:0,2,10	0/1:106,1:93:20.67:21,0,95	0/1:39,0:33:15.16:15,0,82	0/0:26,0:24:8.67:0,9,50	0/0:34,0:31:7.95:0,8,37	0/0:36,0:31:8.66:0,9,71	0/0:48,0:44:21.39:0,21,461	0/1:48,0:42:10.01:10,0,405	0/0:23,0:22:5.67:0,6,35
chr10	10702049	.	T	TAC	1395.25	PASS	AB=0.990;AC=24;AF=0.429;AN=56;BaseQRankSum=5.199;DP=1269;FS=16.137;HRun=0;HaplotypeScore=313.8201;InbreedingCoeff=-0.3967;MQ=34.47;MQ0=31;MQRankSum=-1.243;QD=1.50;ReadPosRankSum=4.228;VQSLOD=0.8050;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:47,1:42:11.28:0,11,397	1/1:10,0:10:5.34:22,5,0	0/0:41,0:13:38.41:0,38,490	0/0:52,0:20:49.14:0,49,617	0/1:35,0:35:72.62:73,0,229	0/0:33,0:32:3.08:0,3,42	0/1:26,2:18:30.56:31,0,49	0/1:32,0:21:4.55:5,0,119	0/1:45,1:44:3.54:4,0,234	0/1:72,0:66:99:237,0,542	1/1:24,0:23:1.10:29,1,0	0/1:87,0:80:99:144,0,307	0/1:59,0:55:87.38:87,0,197	0/1:74,1:67:99:111,0,238	0/1:81,0:75:99:114,0,150	0/1:75,0:68:54.08:54,0,105	0/1:35,0:34:77.61:78,0,147	0/1:36,0:34:99:118,0,223	0/1:27,0:20:53.75:54,0,144	0/0:17,0:17:6.49:0,6,83	0/0:104,0:88:9.60:0,10,343	0/0:38,1:33:10.45:0,10,158	0/1:25,0:23:52.81:53,0,83	0/1:32,0:29:10.78:11,0,75	0/1:34,0:29:15.77:16,0,141	0/1:46,0:41:88.35:88,0,396	0/1:45,0:39:99:203,0,136	1/1:16,0:15:5.42:22,5,0
chr10	10702051	.	CAT	C	3609.71	PASS	AB=0.909;AC=23;AF=0.411;AN=56;BaseQRankSum=1.671;DP=1250;FS=9.576;HRun=0;HaplotypeScore=300.1974;InbreedingCoeff=-0.6357;MQ=34.42;MQ0=30;MQRankSum=0.535;QD=3.32;ReadPosRankSum=-1.458;VQSLOD=0.2454;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:45,1:41:62.51:63,0,417	0/0:9,0:9:5.67:0,6,20	0/0:38,0:13:32.28:0,32,611	0/0:50,0:21:46.71:0,47,794	0/1:31,3:34:99:124,0,269	0/0:32,2:32:2.02:0,2,56	0/1:28,2:19:26.80:27,0,114	0/1:33,4:26:99:158,0,470	0/1:43,3:42:15.13:15,0,359	0/1:57,12:61:99:562,0,864	1/1:25,0:24:3.31:34,3,0	0/1:80,8:79:99:336,0,383	0/1:47,11:53:99:223,0,271	0/1:61,12:64:99:278,0,292	0/1:69,9:71:99:351,0,164	0/1:57,14:64:99:224,0,154	0/1:31,4:34:19.60:20,0,242	0/1:37,1:35:99:207,0,295	0/1:26,2:20:50.75:51,0,251	0/0:16,1:17:5.73:0,6,90	0/1:101,4:89:74.59:75,0,532	0/1:37,1:32:46.49:46,0,234	0/1:22,4:24:63.85:64,0,112	0/1:32,3:32:80.25:80,0,85	0/1:31,1:27:61.13:61,0,174	0/1:38,8:41:99:405,0,680	0/1:38,7:39:99:207,0,394	0/0:15,0:14:3.22:0,3,13
chr10	10702053	.	TAC	T	636.27	PASS	AB=0.992;AC=15;AF=0.268;AN=56;BaseQRankSum=4.163;DP=1219;FS=31.135;HRun=0;HaplotypeScore=303.7664;InbreedingCoeff=-0.2823;MQ=34.43;MQ0=31;MQRankSum=2.871;QD=0.90;ReadPosRankSum=0.107;VQSLOD=1.2763;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:38:1.31:0,1,470	0/0:9,0:9:7.30:0,7,34	0/0:37,0:13:33.11:0,33,545	0/0:51,0:22:49.16:0,49,778	0/1:35,0:35:12.92:13,0,338	0/0:33,0:31:3.90:0,4,55	0/0:31,0:20:15.94:0,16,197	0/0:36,0:25:39.13:0,39,625	0/0:47,0:43:22.06:0,22,422	0/1:67,1:60:99:165,0,1039	1/1:23,0:22:2.80:10,3,0	0/1:86,0:76:84.26:84,0,414	0/1:59,0:54:41.12:41,0,371	0/1:71,0:62:55.76:56,0,343	0/1:75,2:68:99:130,0,186	0/1:70,1:62:36.20:36,0,235	0/0:32,0:31:15.93:0,16,357	0/0:35,0:32:5.54:0,6,473	0/0:30,0:20:4.53:0,5,348	0/0:16,0:16:5.39:0,5,96	0/0:97,1:84:28.66:0,29,656	0/1:37,0:31:1.12:1,0,257	0/1:27,0:24:16.61:17,0,152	0/1:32,0:30:32.33:32,0,87	0/1:30,1:27:7.19:7,0,200	0/1:43,1:39:99:151,0,803	0/1:43,0:37:37.80:38,0,525	0/0:14,0:13:3.22:0,3,13
chr10	10702062	.	ACT	A	737.13	PASS	AB=0.918;AC=16;AF=0.286;AN=56;BaseQRankSum=11.076;DP=1177;FS=1.456;HRun=0;HaplotypeScore=298.6857;InbreedingCoeff=-0.2751;MQ=34.66;MQ0=32;MQRankSum=-2.412;QD=1.03;ReadPosRankSum=-2.442;VQSLOD=1.6187;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,3:35:7.37:0,7,664	0/0:9,1:10:8.92:0,9,78	0/0:41,0:18:5.49:0,5,458	0/0:49,2:21:56.61:0,57,898	0/0:33,2:34:25.06:0,25,626	0/0:29,4:33:11.95:0,12,231	0/0:26,3:20:3.37:0,3,278	0/0:29,0:22:54.19:0,54,1042	0/1:47,2:44:0.70:1,0,734	0/1:55,7:53:99:99,0,1202	1/1:19,4:22:3.33:25,3,0	0/1:74,9:73:99:183,0,480	0/1:56,5:56:77.89:78,0,614	0/1:54,10:56:74.03:74,0,356	0/1:60,9:62:99:102,0,303	0/1:62,9:64:7.72:8,0,433	0/1:25,5:29:99:107,0,353	0/1:23,4:25:99:111,0,457	0/0:28,7:22:34.92:0,35,575	0/0:15,1:16:5.73:0,6,115	0/0:84,7:80:18.72:0,19,906	0/0:33,4:31:6.47:0,6,333	0/1:28,2:27:12.14:12,0,313	0/1:27,0:26:3.50:3,0,106	0/1:28,1:26:7.17:7,0,271	0/1:43,2:39:62.52:63,0,1071	0/1:42,1:37:11:11,0,646	0/0:12,0:11:9.24:0,9,128
chr10	10702063	.	CTCACACAT	C	1205.96	PASS	AB=0.995;AC=17;AF=0.304;AN=56;BaseQRankSum=10.727;DP=1166;FS=8.868;HRun=0;HaplotypeScore=339.2240;InbreedingCoeff=-0.3210;MQ=34.99;MQ0=32;MQRankSum=-3.953;QD=1.64;ReadPosRankSum=-6.131;VQSLOD=0.2782;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:38,0:35:8.20:8,0,1549	0/0:11,0:11:10.37:0,10,171	0/0:41,0:18:48.34:0,48,981	0/0:50,0:20:57.19:0,57,1690	0/0:35,0:35:18.93:0,19,1394	0/0:35,0:33:13.26:0,13,412	0/0:27,0:18:16.67:0,17,639	0/0:27,0:20:57.20:0,57,2270	0/0:49,0:44:16.54:0,17,1545	0/1:61,0:52:99:203,0,2773	1/1:23,0:22:3.92:38,4,0	0/1:83,0:73:99:243,0,1179	0/1:58,1:54:99:118,0,1213	0/1:63,0:55:99:136,0,961	0/1:67,2:61:99:177,0,654	0/1:69,2:63:53.14:53,0,902	0/1:29,0:30:39.01:39,0,740	0/1:28,0:25:27.02:27,0,939	0/0:35,0:22:19.98:0,20,1070	0/0:15,0:15:5.24:0,5,274	0/0:92,0:81:9.54:0,10,1993	0/1:36,0:31:30:30,0,774	0/1:30,0:27:28.98:29,0,668	0/1:28,0:26:16.69:17,0,267	0/1:29,0:26:20.72:21,0,635	0/1:43,0:37:87.58:88,0,2288	0/1:44,0:38:99:139,0,1210	0/0:12,0:11:12.04:0,12,233
chr10	10703550	.	TAC	T	249.17	PASS	AB=0.941;AC=9;AF=0.161;AN=56;BaseQRankSum=1.251;DP=787;FS=23.942;HRun=0;HaplotypeScore=204.0985;InbreedingCoeff=0.7437;MQ=47.61;MQ0=20;MQRankSum=2.833;QD=1.86;ReadPosRankSum=1.302;VQSLOD=0.8195;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:8,30:38:8.85:112,9,0	0/0:13,0:13:27.05:0,27,358	0/0:48,0:12:18.90:0,19,239	0/0:39,0:12:17.99:0,18,200	0/0:17,0:17:26.75:0,27,401	1/1:8,14:21:12.03:150,12,0	1/1:8,20:28:7.99:83,8,0	0/0:42,0:35:60.60:0,61,815	1/1:11,19:30:1.77:36,2,0	0/0:26,0:26:38.10:0,38,655	0/0:22,0:22:26.12:0,26,401	0/0:26,0:25:44.64:0,45,584	0/0:20,0:20:47.44:0,47,547	0/0:30,0:30:44.54:0,45,654	0/0:44,0:44:66.19:0,66,1036	0/0:30,0:30:32.76:0,33,414	0/0:26,0:26:8.02:0,8,493	0/0:20,0:20:52.76:0,53,630	0/0:21,0:20:41.16:0,41,593	0/0:22,0:22:51.16:0,51,797	0/0:68,0:66:99:0,126,1955	0/0:19,0:19:30.09:0,30,447	0/0:24,0:24:15.05:0,15,217	0/0:19,0:18:17.79:0,18,282	0/0:20,0:20:14.61:0,15,295	0/0:38,0:37:47.15:0,47,1166	0/0:19,0:19:30.05:0,30,407	0/1:15,1:16:8.15:8,0,328
chr10	10703551	.	ACACACACACACACT	A	5011.01	PASS	AB=1.000;AC=30;AF=0.556;AN=54;BaseQRankSum=-11.243;DP=785;FS=2.312;HRun=0;HaplotypeScore=305.8919;InbreedingCoeff=-0.2859;MQ=47.38;MQ0=21;MQRankSum=4.998;QD=7.87;ReadPosRankSum=7.396;VQSLOD=2.6849;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:37,0:37:8.97:142,9,0	0/1:13,0:13:87.77:88,0,101	0/0:47,0:11:3.01:0,3,54	./.	0/0:18,0:18:15.05:0,15,323	1/1:24,0:23:11.69:192,12,0	0/1:28,0:28:55.30:89,0,55	1/1:42,0:35:31.35:472,31,0	0/1:30,0:30:38.74:39,0,65	0/1:28,0:27:99:213,0,155	1/1:21,0:21:11.09:282,11,0	0/1:25,0:24:99:168,0,228	0/1:20,0:20:99:181,0,411	0/1:30,0:30:62.03:292,0,62	1/1:44,0:44:36.53:617,37,0	0/1:30,0:30:99:134,0,106	0/1:26,0:26:99:168,0,276	0/1:20,0:20:99:157,0,212	0/1:19,0:18:89.72:90,0,341	0/1:22,0:22:99:180,0,813	0/1:66,0:64:99:427,0,2117	1/1:20,0:20:14.12:211,14,0	0/0:17,7:24:3.35:0,3,16	1/1:19,0:18:8.59:166,9,0	0/0:20,0:20:17.79:0,18,366	0/1:38,0:37:99:535,0,201	0/1:19,0:19:34.49:41,0,34	0/1:16,0:16:99:127,0,141
chr10	10703577	.	ACT	A	6506.75	PASS	AB=0.945;AC=45;AF=0.804;AN=56;BaseQRankSum=-0.441;DP=714;FS=7.550;HRun=0;HaplotypeScore=214.2893;InbreedingCoeff=0.1405;MQ=43.14;MQ0=27;MQRankSum=0.042;QD=9.68;ReadPosRankSum=-4.995;VQSLOD=2.6579;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:27,12:37:14.29:109,14,0	1/1:5,7:12:14.72:129,15,0	0/0:19,0:3:6:0,6,53	0/0:22,0:2:2.84:0,3,14	0/1:18,1:19:3.82:4,0,148	1/1:19,0:18:17.72:146,18,0	1/1:30,1:31:3.06:140,3,0	0/1:46,0:37:99:419,0,103	1/1:25,0:25:23.57:181,24,0	1/1:17,8:21:53.49:486,53,0	1/1:13,5:18:27.07:209,27,0	1/1:16,8:23:38.70:328,39,0	1/1:15,8:23:59.83:530,60,0	1/1:26,10:36:53.77:418,54,0	1/1:22,21:43:57.91:457,58,0	1/1:7,15:23:23.41:179,23,0	1/1:20,7:27:1.82:332,2,0	1/1:15,6:21:52.31:422,52,0	0/1:20,1:16:73.90:115,0,74	0/1:19,0:18:24.60:130,0,25	0/1:68,1:63:36.60:537,0,37	1/1:9,7:16:17.54:144,18,0	1/1:12,8:20:2.53:31,3,0	1/1:10,6:16:11.82:102,12,0	0/1:23,0:23:4.16:4,0,161	1/1:24,8:29:30.08:520,30,0	0/1:8,5:13:45.44:157,0,45	1/1:6,6:12:32.94:276,33,0
chr10	10703590	.	CACAT	C	7038.75	PASS	AB=0.992;AC=44;AF=0.786;AN=56;BaseQRankSum=-1.665;DP=711;FS=11.120;HRun=0;HaplotypeScore=224.2807;InbreedingCoeff=0.1118;MQ=42.97;MQ0=25;MQRankSum=0.920;QD=10.66;ReadPosRankSum=-3.280;VQSLOD=2.7510;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:41,0:39:13.35:96,13,0	1/1:10,0:10:8.86:122,9,0	0/0:28,0:9:8.15:0,8,217	0/1:29,0:10:14.02:14,0,258	0/1:18,0:18:4.73:5,0,39	1/1:13,0:12:8.57:71,9,0	0/1:30,0:30:4.58:114,0,5	0/1:37,0:28:99:243,0,181	1/1:24,0:24:23.94:190,24,0	1/1:26,0:21:42.11:587,42,0	1/1:17,0:17:20.85:152,21,0	1/1:25,0:24:45.37:510,45,0	1/1:19,1:20:53.76:734,54,0	1/1:33,0:33:39.20:421,39,0	1/1:38,2:40:46.83:420,47,0	1/1:22,1:23:19.28:273,19,0	1/1:29,0:29:60.92:634,61,0	1/1:17,1:18:37.74:469,38,0	0/1:25,0:19:59.62:60,0,186	0/1:16,0:15:20.39:20,0,204	0/1:70,0:65:99:298,0,500	1/1:13,0:13:6.33:45,6,0	1/1:18,1:19:2.43:52,2,0	1/1:18,1:19:5.43:75,5,0	0/0:23,0:23:8.04:0,8,80	1/1:33,0:31:21.78:641,22,0	0/1:14,1:15:36.46:297,0,36	1/1:17,0:17:38.52:496,39,0
chr10	10703592	.	CAT	C	6234.95	PASS	AB=0.971;AC=45;AF=0.804;AN=56;BaseQRankSum=0.632;DP=722;FS=12.326;HRun=0;HaplotypeScore=214.0206;InbreedingCoeff=0.0481;MQ=44.15;MQ0=24;MQRankSum=1.424;QD=9.05;ReadPosRankSum=-2.992;VQSLOD=2.7788;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:28,12:38:15.88:123,16,0	1/1:2,7:9:8.84:67,9,0	0/0:33,0:11:7.28:0,7,209	0/1:32,0:13:30.41:30,0,266	0/1:17,1:18:5:5,0,39	1/1:12,0:11:8.77:71,9,0	0/1:30,0:30:13.76:135,0,14	0/1:37,0:29:99:320,0,129	1/1:25,0:25:27.39:219,27,0	1/1:18,8:21:47.73:483,48,0	1/1:12,5:17:18.63:149,19,0	1/1:17,8:24:46.60:393,47,0	1/1:15,7:22:59.89:521,60,0	1/1:21,11:32:41.77:353,42,0	1/1:20,19:39:50.28:404,50,0	1/1:8,15:23:20.40:157,20,0	1/1:22,7:29:59.13:446,59,0	1/1:13,5:18:42.01:342,42,0	0/1:26,0:20:80.74:99,0,81	0/1:16,0:15:40.35:45,0,40	0/1:73,0:68:34.02:605,0,34	1/1:8,7:15:12.44:93,12,0	1/1:12,7:19:2.53:31,3,0	1/1:15,4:19:11.81:102,12,0	0/1:21,0:21:0.05:0,0,41	1/1:26,8:32:31.85:529,32,0	0/1:11,4:15:45.26:198,0,45	1/1:11,6:17:38.59:315,39,0
chr10	10703594	.	T	TACACACACACAC	5735.70	PASS	AB=0.936;AC=40;AF=0.714;AN=56;BaseQRankSum=-5.930;DP=737;FS=46.782;HRun=0;HaplotypeScore=310.4534;InbreedingCoeff=-0.0494;MQ=44.68;MQ0=24;MQRankSum=1.941;QD=8.16;ReadPosRankSum=-3.999;VQSLOD=1.9757;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:41,0:39:12.58:107,13,0	1/1:9,0:9:5.17:33,5,0	0/0:32,0:11:7.33:0,7,212	0/1:35,0:14:2.54:3,0,329	0/1:5,14:20:0:0,0,0	1/1:13,0:12:9.45:74,9,0	1/1:28,0:28:21.66:157,22,0	1/1:36,0:29:68.52:573,69,0	1/1:25,0:25:27.90:214,28,0	0/1:27,0:22:37.61:329,0,38	1/1:17,0:17:13.24:93,13,0	0/1:25,0:24:23.45:227,0,23	0/1:23,0:23:99:361,0,132	1/1:32,0:32:32.84:316,33,0	1/1:39,0:39:48.68:457,49,0	0/1:24,0:24:34.71:200,0,35	0/1:29,0:29:93.21:367,0,93	0/1:19,0:19:28.03:365,0,28	0/1:27,0:21:16.60:198,0,17	0/1:16,0:15:2.03:2,0,299	0/1:75,0:70:99:425,0,642	1/1:15,0:15:12.44:96,12,0	1/1:19,0:19:2.97:10,3,0	1/1:19,0:19:12.29:104,12,0	0/1:4,19:29:0:0,0,0	0/1:29,0:27:0.80:420,0,1	1/1:15,0:15:25.02:342,25,0	0/1:17,0:17:90.97:263,0,91
chr10	10704544	.	A	AGGTT	1783.25	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-5.174;DP=677;FS=13.182;HRun=0;HaplotypeScore=108.3721;InbreedingCoeff=0.9949;MQ=78.19;MQ0=0;MQRankSum=-3.773;QD=43.49;ReadPosRankSum=0.213;VQSLOD=3.7157;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,126,2196	0/0:7,0:7:18.06:0,18,324	0/0:17,0:17:35.11:0,35,755	0/0:28,0:28:60.45:0,60,1161	1/1:3,12:16:27.05:642,27,0	0/0:19,0:19:45.14:0,45,779	0/0:30,0:30:72.22:0,72,1252	0/0:33,0:33:87.29:0,87,1533	0/0:26,0:26:63.22:0,63,1132	0/0:24,0:24:57.19:0,57,1000	0/0:12,0:12:36.11:0,36,619	0/0:36,0:36:99:0,105,1816	0/0:25,0:25:57.12:0,57,905	0/0:34,0:34:90.29:0,90,1582	0/0:17,0:17:51.16:0,51,886	0/0:29,0:29:81.23:0,81,1358	0/0:23,0:23:54.19:0,54,971	0/0:29,0:29:72.25:0,72,1283	0/0:15,0:15:36.11:0,36,617	0/0:20,0:20:54.17:0,54,941	0/0:50,0:50:99:0,141,2389	0/0:16,0:16:42.14:0,42,755	0/0:15,0:15:42.07:0,42,690	0/0:34,0:34:88.59:0,89,1578	1/1:5,20:24:51.13:1263,51,0	0/0:23,0:23:54.19:0,54,965	0/0:16,0:16:45.15:0,45,795	0/0:11,0:11:33.09:0,33,561
chr10	10705799	.	G	GTTGT	29233.10	PASS	AB=1.000;AC=47;AF=0.839;AN=56;BaseQRankSum=-10.804;DP=794;FS=3.253;HRun=0;HaplotypeScore=112.9437;InbreedingCoeff=0.9141;MQ=62.24;MQ0=5;MQRankSum=-0.748;QD=42.49;ReadPosRankSum=1.933;VQSLOD=5.3821;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,29:42:78.26:1844,78,0	1/1:7,5:13:21.07:499,21,0	0/1:24,0:17:2.25:2,0,266	0/0:32,0:26:48.05:0,48,801	1/1:5,0:24:36.12:593,36,0	0/0:22,0:22:57.18:0,57,928	0/0:22,0:22:60.20:0,60,976	1/1:23,9:32:42.14:930,42,0	0/0:29,0:29:63.20:0,63,1021	1/1:13,24:38:34.10:1779,34,0	1/1:9,8:18:30.10:695,30,0	1/1:5,27:32:69.24:1689,69,0	1/1:6,13:19:42.14:1000,42,0	1/1:6,25:31:25.09:1686,25,0	1/1:6,29:34:75.26:1805,75,0	1/1:9,34:43:40.14:2067,40,0	1/1:9,21:33:57.19:1393,57,0	1/1:7,13:21:25.21:697,25,0	1/1:25,7:34:38.98:701,39,0	1/1:7,18:25:54.18:1254,54,0	1/1:19,28:46:75.73:1849,76,0	1/1:4,13:18:42.14:999,42,0	1/1:5,26:32:63.07:1557,63,0	1/1:7,25:31:60.21:1449,60,0	1/1:0,0:11:15.05:263,15,0	1/1:6,28:35:90.31:2154,90,0	1/1:8,15:24:45.15:1067,45,0	1/1:5,17:22:51.17:1261,51,0
chr10	10706929	.	CAATGAATGAATG	C	21247.81	PASS	AB=0.651;AC=45;AF=0.804;AN=56;BaseQRankSum=3.765;DP=668;FS=12.183;HRun=0;HaplotypeScore=239.0865;InbreedingCoeff=0.5264;MQ=57.52;MQ0=4;MQRankSum=-7.409;QD=35.83;ReadPosRankSum=5.848;VQSLOD=2.7915;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:18,0:35:31.18:31,0,202	1/1:5,7:12:6.02:210,6,0	0/0:31,0:23:28.34:0,28,1370	0/0:19,0:17:27.09:0,27,1049	1/1:8,11:19:30.10:904,30,0	1/1:4,22:26:42.14:1472,42,0	1/1:8,17:25:30.10:1049,30,0	0/0:12,0:25:8.52:0,9,213	1/1:4,16:20:33.58:1158,34,0	1/1:10,27:37:81.26:2366,81,0	1/1:10,13:23:21.03:542,21,0	1/1:5,18:23:42.14:1457,42,0	1/1:7,11:19:24.08:840,24,0	1/1:6,13:19:30.10:1049,30,0	1/1:12,19:31:39.13:1321,39,0	1/1:7,18:25:39.13:1367,39,0	0/1:11,10:21:99:252,0,102	1/1:6,12:18:15.05:526,15,0	0/1:15,0:27:5.93:6,0,160	0/1:6,0:23:3.62:4,0,182	0/1:11,0:24:1.01:1,0,151	1/1:6,23:29:48.16:1428,48,0	1/1:7,15:22:24.01:807,24,0	1/1:15,13:28:12.04:421,12,0	1/1:7,11:18:24.08:841,24,0	1/1:7,17:24:45.15:1303,45,0	1/1:7,18:25:36.12:1261,36,0	1/1:6,13:19:18.06:631,18,0
chr10	10707801	.	GGCGT	G	1358.98	PASS	AB=1.000;AC=13;AF=0.241;AN=54;BaseQRankSum=0.237;DP=409;FS=13.236;HRun=0;HaplotypeScore=92.8061;InbreedingCoeff=0.4260;MQ=71.72;MQ0=5;MQRankSum=-1.175;QD=8.77;ReadPosRankSum=-0.945;VQSLOD=1.6332;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,30:31:3.01:59,3,0	0/0:9,0:9:5.98:0,6,95	0/0:17,0:12:22.36:0,22,208	0/0:22,0:19:47.10:0,47,348	0/0:4,0:4:11.84:0,12,78	0/0:19,0:19:50.70:0,51,432	0/0:20,0:20:44.21:0,44,322	1/1:22,0:21:59.97:530,60,0	0/0:14,0:12:32.52:0,33,236	0/0:8,0:7:17.69:0,18,136	0/0:3,0:3:5.77:0,6,34	0/1:10,0:10:9.15:9,0,113	0/0:11,0:11:28.37:0,28,212	0/0:14,0:14:35.48:0,35,259	0/0:21,0:21:37.81:0,38,384	0/0:21,0:21:24.04:0,24,255	0/0:16,0:16:34.40:0,34,280	0/0:13,0:13:38.60:0,39,269	1/1:14,0:14:38.92:327,39,0	./.	1/1:27,0:27:62.87:513,63,0	0/0:5,0:5:2.98:0,3,21	0/1:6,0:6:20.24:20,0,28	0/0:25,0:25:32.97:0,33,307	0/0:10,0:10:26.10:0,26,255	0/1:21,0:21:21:21,0,227	0/1:13,0:12:40.43:40,0,128	0/1:11,0:10:2.25:2,0,115
chr10	10707803	.	CGTGTGTGTGTGTGTGTGT	C	3796.38	PASS	AB=0.962;AC=29;AF=0.558;AN=52;BaseQRankSum=4.381;DP=420;FS=17.633;HRun=0;HaplotypeScore=180.5288;InbreedingCoeff=0.5937;MQ=67.59;MQ0=5;MQRankSum=-3.270;QD=18.34;ReadPosRankSum=0.772;VQSLOD=1.0345;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:2.86:0,3,161	1/1:7,0:8:6.02:173,6,0	0/0:15,0:10:3.01:0,3,41	0/0:21,0:18:3.01:0,3,69	0/0:7,0:7:3.01:0,3,62	0/0:20,0:20:15.05:0,15,393	0/0:21,0:21:15.05:0,15,279	0/0:21,0:20:14.64:0,15,236	0/0:15,0:13:9.03:0,9,188	1/1:7,0:6:9.01:148,9,0	./.	1/1:6,3:10:6.02:270,6,0	1/1:11,0:11:2.90:16,3,0	1/1:12,2:14:2.70:109,3,0	1/1:16,0:18:3.01:126,3,0	1/1:15,6:21:3.01:145,3,0	1/1:14,1:16:14.99:302,15,0	1/1:13,0:13:9.01:146,9,0	0/0:16,0:16:11.05:0,11,183	./.	0/0:25,0:25:18.06:0,18,362	1/1:3,5:8:6.02:193,6,0	1/1:2,4:7:9.92:370,10,0	0/1:24,0:25:56.63:321,0,57	0/0:14,0:13:12.04:0,12,826	1/1:11,11:23:23.74:650,24,0	1/1:10,1:13:12.54:538,13,0	1/1:8,4:11:6.02:290,6,0
chr10	10708080	.	A	AATAT	2860.64	PASS	AC=22;AF=0.611;AN=36;BaseQRankSum=-6.880;DP=142;FS=1.976;HRun=0;HaplotypeScore=37.6014;InbreedingCoeff=0.5960;MQ=92.56;MQ0=3;MQRankSum=1.274;QD=46.90;ReadPosRankSum=4.003;VQSLOD=3.4582;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:3,0:5:6.89:0,7,58	1/1:1,1:2:3.01:76,3,0	0/0:6,0:5:2.91:0,3,20	0/0:21,0:13:2.82:0,3,68	1/1:0,1:1:3.01:75,3,0	0/0:7,0:7:12.04:0,12,206	./.	0/0:12,0:29:48.42:0,48,435	./.	1/1:1,2:3:6.02:151,6,0	./.	./.	1/1:1,0:1:3.01:56,3,0	./.	1/1:0,2:2:6.02:151,6,0	1/1:0,2:2:3.01:76,3,0	1/1:0,13:13:33.11:829,33,0	1/1:7,14:21:36.12:906,36,0	0/0:1,0:5:10.83:0,11,89	./.	0/0:0,0:1:3:0,3,28	./.	./.	./.	./.	1/1:3,2:5:9.03:226,9,0	1/1:0,1:3:3.01:76,3,0	1/1:3,5:8:15.05:377,15,0
chr10	10708104	.	A	AT	1498.04	PASS	AC=16;AF=0.296;AN=54;BaseQRankSum=-4.777;DP=201;FS=7.615;HRun=7;HaplotypeScore=35.7629;InbreedingCoeff=0.8190;MQ=82.44;MQ0=1;MQRankSum=-2.035;QD=24.16;ReadPosRankSum=-0.024;VQSLOD=2.9344;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,4:5:12.04:142,12,0	0/0:1,0:1:3:0,3,29	0/0:12,0:12:27.91:0,28,257	0/0:14,0:10:8.33:0,8,83	0/0:7,0:7:21.03:0,21,203	1/1:0,8:8:21.06:254,21,0	1/1:0,2:2:3.01:36,3,0	1/1:6,20:25:57.63:678,58,0	1/1:2,0:2:2.99:24,3,0	0/0:9,0:9:24.04:0,24,232	0/0:4,0:4:12.01:0,12,112	0/0:5,0:5:15.01:0,15,139	0/0:4,0:4:12.02:0,12,116	./.	0/0:8,0:8:18:0,18,164	0/0:2,0:2:6.01:0,6,58	0/0:16,0:16:36.03:0,36,340	0/0:18,0:18:44.89:0,45,398	1/1:2,8:10:24.07:290,24,0	1/1:0,4:4:11.98:128,12,0	1/1:4,1:5:12.02:132,12,0	0/0:7,0:7:21.03:0,21,199	0/0:5,0:5:15.02:0,15,145	0/0:3,0:3:9:0,9,82	0/0:5,0:5:15.02:0,15,141	0/0:6,0:6:12.02:0,12,116	0/0:8,0:8:18.03:0,18,174	0/0:5,0:5:8.97:0,9,73
chr10	10708821	.	T	TGG	1491.55	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=0.419;DP=472;FS=0.496;HRun=8;HaplotypeScore=73.2250;InbreedingCoeff=0.9389;MQ=77.70;MQ0=2;MQRankSum=-0.172;QD=11.74;ReadPosRankSum=-3.022;VQSLOD=0.0388;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:29.64:0,30,334	0/0:5,0:5:15.04:0,15,167	0/0:15,0:15:25.92:0,26,245	0/0:13,0:13:11.73:0,12,101	0/0:4,0:13:5.83:0,6,49	1/1:4,0:15:27.45:94,27,0	1/1:3,0:24:11.58:110,12,0	1/1:3,9:13:24.03:327,24,0	1/1:1,0:11:9.93:34,10,0	0/0:17,0:17:39.09:0,39,429	0/0:8,0:8:15.04:0,15,167	0/0:24,0:24:54.06:0,54,593	0/0:20,0:20:57.15:0,57,635	0/0:22,0:22:57.14:0,57,635	0/0:17,0:17:48.11:0,48,526	0/0:25,0:27:54.01:0,54,719	0/0:17,0:17:45.09:0,45,489	0/0:16,0:17:30:0,30,393	1/1:4,1:5:9.03:124,9,0	1/1:6,10:17:17.94:230,18,0	1/1:11,27:40:48.16:762,48,0	0/0:16,0:16:27.05:0,27,300	0/0:11,0:11:21.02:0,21,234	0/0:14,0:14:39.10:0,39,434	0/0:4,0:16:32.86:0,33,142	0/0:25,0:25:57.14:0,57,635	0/0:17,0:17:36.03:0,36,387	0/0:9,0:9:21.03:0,21,234
chr10	10709065	.	T	TCACACACACA	8183.07	PASS	AB=0.899;AC=29;AF=0.518;AN=56;BaseQRankSum=1.609;DP=707;FS=0.404;HRun=0;HaplotypeScore=260.1420;InbreedingCoeff=0.7102;MQ=59.73;MQ0=23;MQRankSum=-5.324;QD=28.32;ReadPosRankSum=1.099;VQSLOD=3.8937;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,108,3010	0/1:9,1:10:30.51:197,0,31	0/0:62,0:26:66.15:0,66,1531	0/0:72,0:33:72.35:0,72,1773	0/0:22,0:22:38.86:0,39,1018	0/0:16,0:16:27.09:0,27,729	0/0:49,0:49:59.26:0,59,1661	0/0:26,0:25:56.56:0,57,1390	0/0:29,0:29:53.78:0,54,1221	1/1:18,1:16:6.80:776,7,0	1/1:9,1:9:6.01:74,6,0	1/1:11,4:16:27.56:643,28,0	1/1:17,7:24:20.80:1071,21,0	1/1:18,3:20:5.60:535,6,0	1/1:22,5:27:38.65:829,39,0	0/1:18,3:20:82.12:309,0,82	1/1:20,4:23:27.81:645,28,0	1/1:10,1:9:20.97:389,21,0	0/0:20,0:20:19.02:0,19,994	0/0:18,0:18:7.90:0,8,508	0/0:35,0:28:26.78:0,27,592	0/1:19,2:21:17.16:383,0,17	1/1:11,2:13:6.58:92,7,0	1/1:17,2:19:16.93:352,17,0	0/0:17,0:17:45.14:0,45,1221	1/1:22,0:20:33.88:803,34,0	1/1:22,1:22:36.95:955,37,0	1/1:4,0:4:9.03:127,9,0
chr10	10709069	.	TCA	T	1387.27	PASS	AB=0.983;AC=8;AF=0.148;AN=54;BaseQRankSum=-4.970;DP=820;FS=4.544;HRun=0;HaplotypeScore=259.0588;InbreedingCoeff=0.6320;MQ=52.80;MQ0=26;MQRankSum=7.829;QD=6.77;ReadPosRankSum=4.096;VQSLOD=3.0135;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,38:52:57.48:868,57,0	0/0:11,0:11:8.51:0,9,60	0/1:63,1:25:13.21:13,0,188	0/0:73,0:30:11.42:0,11,189	1/1:8,10:22:23.91:296,24,0	0/0:18,0:18:20.60:0,21,133	0/1:50,1:51:3.07:3,0,73	0/0:24,0:22:26.78:0,27,203	0/0:28,0:28:8.55:0,9,181	0/0:27,0:24:36.74:0,37,314	./.	0/0:32,0:31:24.03:0,24,185	0/0:31,0:30:36.19:0,36,279	0/0:32,0:31:23.57:0,24,206	0/0:39,0:38:19.75:0,20,135	0/0:28,0:27:16.70:0,17,126	0/0:31,0:29:23.23:0,23,170	0/0:19,0:16:24.73:0,25,175	0/0:21,0:22:23.87:0,24,208	0/0:18,0:20:23.88:0,24,195	0/0:33,1:30:11.98:0,12,102	0/0:24,0:24:12.85:0,13,89	0/0:14,0:14:2.92:0,3,17	0/0:22,0:21:6.78:0,7,42	1/1:4,10:15:30.09:353,30,0	0/0:33,0:29:71.69:0,72,456	0/0:31,0:30:40.82:0,41,309	0/0:5,0:5:11.84:0,12,78
chr10	10709087	.	A	ACACAG	2263.15	PASS	AB=0.968;AC=19;AF=0.339;AN=56;BaseQRankSum=-0.046;DP=847;FS=3.640;HRun=0;HaplotypeScore=321.1711;InbreedingCoeff=-0.1689;MQ=47.64;MQ0=23;MQRankSum=-0.311;QD=4.38;ReadPosRankSum=6.124;VQSLOD=1.4402;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:48,0:48:71.50:72,0,614	0/1:13,0:13:17.12:17,0,84	0/0:52,0:21:10.85:0,11,554	0/0:67,0:30:46.91:0,47,655	0/1:22,0:21:99:118,0,306	0/1:3,14:19:6.52:173,0,7	1/1:8,46:56:14.67:311,15,0	0/0:24,0:22:27.63:0,28,493	1/1:3,26:32:36.08:1043,36,0	0/0:31,0:28:12.69:0,13,586	0/0:15,0:14:0:0,0,0	0/1:39,0:38:42.84:43,0,177	0/1:35,0:34:99:171,0,265	0/1:39,0:38:72.64:73,0,282	0/1:43,0:42:53.95:54,0,73	0/1:32,1:32:99:109,0,121	0/1:31,0:29:65.55:66,0,199	0/1:17,0:14:0.56:1,0,320	0/0:29,0:27:22.55:0,23,459	0/1:22,0:22:12.30:12,0,126	0/0:40,0:32:11.62:0,12,98	0/0:20,0:20:12.79:0,13,82	0/0:13,0:13:2.92:0,3,17	0/1:21,0:20:8.37:30,0,8	0/1:16,0:16:63.84:64,0,371	0/0:34,0:30:36.83:0,37,618	0/1:31,0:30:70.43:70,0,332	0/0:5,0:5:11.87:0,12,99
chr10	10709118	.	ACCTCCG	A	9030.35	PASS	AB=0.542;AC=31;AF=0.596;AN=52;BaseQRankSum=5.485;DP=619;FS=9.836;HRun=0;HaplotypeScore=243.2182;InbreedingCoeff=0.7648;MQ=71.99;MQ0=2;MQRankSum=-13.661;QD=26.48;ReadPosRankSum=5.760;VQSLOD=3.1728;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,108,3492	1/1:1,6:7:8.10:270,8,0	0/0:24,0:22:60.68:0,61,2017	0/0:36,0:32:86.23:0,86,2676	0/0:20,0:20:44.81:0,45,1307	0/0:17,0:17:30.10:0,30,873	0/0:42,0:42:53.99:0,54,1639	1/1:1,24:25:72.23:1633,72,0	0/0:28,0:27:47.37:0,47,1571	1/1:3,13:16:39.13:922,39,0	0/1:2,8:10:0:0,0,0	1/1:3,30:33:18.39:425,18,0	1/1:2,25:27:45.11:995,45,0	1/1:2,27:29:18.25:425,18,0	1/1:5,35:40:4.85:155,5,0	0/1:4,23:27:86.02:390,0,86	1/1:6,17:23:24.04:510,24,0	1/1:3,11:13:24.08:567,24,0	1/1:6,8:14:27.08:588,27,0	1/1:2,13:15:0.47:1,0,0	0/0:5,27:27:0.44:0,0,2	./.	./.	0/1:2,16:17:0:0,0,0	0/0:19,0:19:54.16:0,54,1742	1/1:2,18:18:48.16:1134,48,0	1/1:0,20:20:39.61:922,40,0	1/1:0,3:3:5.98:91,6,0
chr10	10709586	.	T	TTTC	736.15	PASS	AB=1.000;AC=30;AF=0.625;AN=48;BaseQRankSum=-2.970;DP=459;FS=0.000;HRun=0;HaplotypeScore=133.7861;InbreedingCoeff=0.3178;MQ=60.71;MQ0=4;MQRankSum=3.307;QD=2.50;ReadPosRankSum=-4.451;VQSLOD=0.9241;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:28:4.26:13,4,0	1/1:6,0:6:5.35:52,5,0	./.	./.	1/1:26,0:26:27.85:307,28,0	1/1:15,6:21:8.90:126,9,0	0/1:19,0:18:0:0,0,0	./.	1/1:12,1:14:12.04:196,12,0	0/1:28,0:28:22:22,0,44	1/1:14,0:11:1.55:4,2,0	0/0:11,0:10:0.47:0,0,1	0/0:12,0:11:6.82:0,7,42	0/1:9,0:9:0:0,0,0	0/0:7,0:6:3.70:0,4,21	0/0:11,0:10:5.94:0,6,41	0/0:21,0:21:2.97:0,3,20	0/1:7,0:6:15.81:16,0,16	1/1:13,0:12:0.47:1,0,0	1/1:22,0:22:1.55:5,2,0	./.	1/1:21,0:19:0.70:30,1,0	1/1:12,0:11:1.19:30,1,0	1/1:9,0:8:1.77:4,2,0	1/1:21,0:21:3.01:55,3,0	0/0:15,0:14:0.52:0,1,16	1/1:23,0:22:0.43:2,0,0	0/0:25,0:25:9.65:0,10,46
chr10	10709653	.	TTC	T	2663.95	PASS	AB=0.888;AC=36;AF=0.643;AN=56;BaseQRankSum=-0.494;DP=376;FS=3.623;HRun=0;HaplotypeScore=79.2398;InbreedingCoeff=0.0881;MQ=42.94;MQ0=13;MQRankSum=-4.597;QD=9.72;ReadPosRankSum=0.690;VQSLOD=3.3497;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:16:26.61:291,27,0	1/1:6,0:6:11.98:112,12,0	0/0:34,0:9:23.61:0,24,259	0/0:31,0:8:9.04:0,9,170	0/1:21,2:23:79.76:80,0,556	0/0:17,0:17:2.43:0,2,385	0/0:14,0:13:33.07:0,33,427	1/1:17,0:15:28.90:302,29,0	0/1:9,1:10:24.63:25,0,250	1/1:19,0:19:2.29:372,2,0	1/1:15,0:12:9.02:109,9,0	1/1:9,0:8:17.22:188,17,0	0/1:12,0:11:23.31:124,0,23	1/1:2,6:8:3.90:43,4,0	0/1:7,0:6:12.11:36,0,12	0/1:3,4:7:28.83:69,0,29	0/0:2,4:6:2.97:0,3,20	0/1:7,0:6:12.01:58,0,12	1/1:6,7:9:9.69:272,10,0	1/1:14,0:14:9.67:106,10,0	1/1:2,4:6:5.49:57,5,0	1/1:12,0:11:0.69:23,1,0	1/1:12,0:11:1.19:24,1,0	0/1:6,5:9:6.05:48,0,6	0/1:7,2:9:6.13:6,0,247	0/1:9,0:9:5.69:100,0,6	1/1:20,0:20:22.96:309,23,0	0/1:9,1:10:2.64:75,0,3
chr10	10709655	.	C	CT	3110.65	PASS	AB=0.792;AC=35;AF=0.625;AN=56;BaseQRankSum=-0.283;DP=380;FS=8.035;HRun=2;HaplotypeScore=77.4517;InbreedingCoeff=0.2154;MQ=42.83;MQ0=11;MQRankSum=-4.985;QD=11.23;ReadPosRankSum=0.410;VQSLOD=1.3385;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,16:17:27.51:351,28,0	1/1:1,5:6:12:150,12,0	0/0:34,0:9:23.61:0,24,258	0/0:31,0:8:9.03:0,9,159	0/1:20,3:23:99:107,0,408	0/1:15,1:16:12.71:13,0,354	0/0:13,0:12:33.07:0,33,426	1/1:6,11:16:31.55:347,32,0	0/0:10,0:10:11.68:0,12,199	1/1:7,12:19:4.25:453,4,0	1/1:1,14:12:9.03:126,9,0	1/1:2,7:8:17.67:193,18,0	0/1:4,8:11:23.02:124,0,23	1/1:10,0:10:5.05:47,5,0	0/1:3,4:6:12.10:56,0,12	0/1:8,0:8:28.83:69,0,29	0/0:6,0:6:4.21:0,4,23	0/1:2,7:8:12.88:77,0,13	1/1:13,0:10:13.89:311,14,0	1/1:4,11:15:9.67:106,10,0	1/1:6,0:6:6.46:62,6,0	1/1:3,6:9:0.70:41,1,0	1/1:3,9:11:1.20:42,1,0	0/1:10,1:9:8.14:37,0,8	0/0:9,0:9:20.17:0,20,270	0/1:3,7:10:5.03:127,0,5	1/1:3,17:20:22.97:328,23,0	0/1:10,0:10:1.06:122,0,1
chr10	10709656	.	T	TC	2515.90	PASS	AB=0.950;AC=42;AF=0.750;AN=56;BaseQRankSum=6.752;DP=374;FS=0.000;HRun=1;HaplotypeScore=79.4221;InbreedingCoeff=0.7234;MQ=43.13;MQ0=11;MQRankSum=-7.078;QD=9.60;ReadPosRankSum=-2.863;VQSLOD=0.1041;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:18,1:17:29.58:215,30,0	1/1:5,1:6:12:114,12,0	0/0:34,0:9:26.94:0,27,301	0/0:31,0:8:12.72:0,13,177	0/1:22,0:22:7.14:7,0,491	0/0:16,0:16:19.11:0,19,420	0/0:12,0:11:33.11:0,33,428	1/1:15,1:15:24.05:134,24,0	0/0:10,0:10:26.96:0,27,290	1/1:16,2:18:46.02:368,46,0	1/1:15,0:12:8.98:71,9,0	1/1:7,2:8:17.66:138,18,0	1/1:10,2:11:20.81:170,21,0	1/1:9,0:9:5.97:45,6,0	1/1:4,3:6:8.95:81,9,0	1/1:9,0:9:11.95:101,12,0	1/1:5,1:6:3.01:45,3,0	1/1:8,0:7:8.84:78,9,0	1/1:13,0:11:26.51:148,27,0	1/1:12,3:15:14.85:116,15,0	1/1:4,2:6:8.91:73,9,0	1/1:8,2:9:9.74:63,10,0	1/1:10,1:10:8.83:60,9,0	1/1:8,3:10:9.10:53,9,0	0/0:9,0:9:24.02:0,24,292	0/1:8,1:9:2.95:86,0,3	1/1:18,2:20:32.60:229,33,0	1/1:6,4:10:29.80:309,30,0
chr10	10710555	.	C	CG	3639.31	PASS	AB=1.000;AC=53;AF=0.946;AN=56;BaseQRankSum=-2.195;DP=379;FS=1.232;HRun=0;HaplotypeScore=52.9011;InbreedingCoeff=0.2775;MQ=78.64;MQ0=0;MQRankSum=-3.481;QD=10.31;ReadPosRankSum=-0.819;VQSLOD=3.4123;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:13,7:20:47.86:520,48,0	1/1:6,0:6:8.99:75,9,0	0/0:26,0:24:24.53:0,25,353	0/1:14,0:12:50.69:75,0,51	1/1:14,0:15:32.88:256,33,0	1/1:4,13:17:18.06:245,18,0	1/1:6,11:17:12.03:140,12,0	1/1:10,0:10:17.90:150,18,0	1/1:2,15:18:24.05:295,24,0	1/1:6,0:8:17.98:154,18,0	1/1:10,0:10:26.92:214,27,0	1/1:0,0:12:5.98:46,6,0	1/1:0,0:18:2.99:23,3,0	1/1:13,0:14:17.93:140,18,0	1/1:1,0:21:5.98:46,6,0	1/1:1,1:19:8.97:69,9,0	1/1:0,1:22:14.93:114,15,0	1/1:0,1:15:2.99:23,3,0	1/1:8,0:8:17.93:150,18,0	1/1:1,10:11:5.86:36,6,0	1/1:8,0:9:17.90:136,18,0	1/1:6,0:6:14.96:120,15,0	1/1:0,0:3:2.99:23,3,0	1/1:1,1:14:8.99:87,9,0	1/1:8,0:8:17.96:146,18,0	1/1:1,12:14:35.89:293,36,0	1/1:2,0:18:2.98:22,3,0	1/1:0,0:6:5.93:41,6,0
chr10	10711728	.	TGC	T	224.52	PASS	AB=0.982;AC=13;AF=0.232;AN=56;BaseQRankSum=9.367;DP=448;FS=49.312;HRun=0;HaplotypeScore=70.8754;InbreedingCoeff=-0.1493;MQ=72.70;MQ0=6;MQRankSum=-5.743;QD=1.83;ReadPosRankSum=0.923;VQSLOD=-0.3342;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,2:36:11.83:0,12,1213	0/1:5,0:5:43.99:54,0,44	0/0:34,1:15:19.99:0,20,504	0/0:35,0:22:52.43:0,52,807	0/0:21,0:21:48.14:0,48,805	0/0:23,0:23:42.14:0,42,780	0/0:22,0:22:54.15:0,54,863	0/0:30,0:30:78.62:0,79,1336	0/0:17,0:17:27.04:0,27,395	0/1:12,0:12:67.23:67,0,336	0/1:13,0:11:41.59:42,0,289	0/1:7,0:7:16.63:17,0,301	0/0:8,0:8:5.68:0,6,337	0/0:15,1:14:13.39:0,13,550	0/1:9,0:9:18.71:19,0,294	0/1:8,0:8:16.63:17,0,278	0/1:18,1:19:44.25:44,0,672	0/1:8,0:9:9.80:10,0,312	0/0:20,0:20:57.13:0,57,894	0/1:7,1:8:0.05:0,0,224	0/0:11,0:11:33.10:0,33,567	0/1:6,0:6:24.90:25,0,149	0/0:9,0:9:24.07:0,24,416	1/1:3,0:3:2.97:29,3,0	0/0:11,0:11:30.09:0,30,500	0/1:23,1:21:48.92:49,0,763	0/0:19,0:17:20.53:0,21,703	0/0:7,2:5:9.03:0,9,167
chr10	10712037	.	C	CTATT	10415.65	PASS	AC=44;AF=0.846;AN=52;BaseQRankSum=-5.212;DP=361;FS=25.913;HRun=0;HaplotypeScore=60.4897;InbreedingCoeff=0.6022;MQ=63.61;MQ0=0;MQRankSum=-3.079;QD=34.15;ReadPosRankSum=1.197;VQSLOD=2.9504;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,23:27:54.19:1305,54,0	1/1:5,3:9:12:238,12,0	0/0:9,0:9:12.04:0,12,195	0/0:6,0:5:3.39:0,3,94	0/0:16,0:16:27.09:0,27,439	1/1:10,0:16:24.08:440,24,0	1/1:4,0:5:3.01:52,3,0	1/1:32,0:28:35.82:361,36,0	1/1:6,0:9:3.01:52,3,0	1/1:5,5:11:18.06:414,18,0	1/1:2,2:5:5.98:93,6,0	1/1:3,3:6:3.01:73,3,0	1/1:3,4:7:12:237,12,0	1/1:0,2:2:6.02:145,6,0	1/1:1,5:6:6.02:145,6,0	1/1:4,3:7:6.02:145,6,0	1/1:8,31:39:93.32:2200,93,0	1/1:11,18:29:45.15:1088,45,0	1/1:9,0:12:9.03:157,9,0	1/1:3,0:3:3.01:59,3,0	1/1:9,0:9:3.01:52,3,0	./.	./.	1/1:7,2:9:6.02:145,6,0	0/0:21,0:21:51.17:0,51,820	1/1:6,7:13:20.99:406,21,0	1/1:5,5:11:12.04:290,12,0	1/1:5,33:38:96.33:2319,96,0
chr10	10713681	.	CA	C	1085.30	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=-8.344;DP=613;FS=2.621;HRun=8;HaplotypeScore=91.9607;InbreedingCoeff=0.0779;MQ=64.68;MQ0=0;MQRankSum=1.151;QD=4.14;ReadPosRankSum=-4.686;VQSLOD=-0.7184;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,99,1171	0/0:9,0:9:17.19:0,17,76	0/0:9,0:8:7.69:0,8,72	0/0:7,0:5:3.85:0,4,22	1/1:4,26:30:69.01:648,69,0	0/0:21,0:21:57.16:0,57,676	0/0:24,0:24:63.16:0,63,737	0/0:30,0:30:29.40:0,29,159	0/0:18,0:18:42.13:0,42,507	0/1:43,0:43:40.55:41,0,197	0/0:14,0:14:13.87:0,14,101	0/1:17,0:17:14.67:15,0,65	0/1:18,0:18:12.91:13,0,81	0/1:16,0:16:12.23:12,0,95	0/0:32,0:32:63.77:0,64,243	0/0:25,0:25:50.09:0,50,200	0/1:25,0:25:3.42:3,0,127	0/1:19,0:19:20:20,0,100	0/1:15,0:15:39.39:39,0,71	0/0:17,0:17:17.54:0,18,140	0/0:20,0:20:19.84:0,20,144	0/0:23,0:23:53.29:0,53,199	0/0:22,0:22:55.05:0,55,236	0/0:26,0:26:2.58:0,3,121	1/1:1,14:15:39.06:376,39,0	0/1:29,0:29:57.81:58,0,133	0/1:35,0:35:20.05:20,0,181	0/0:17,0:17:45.91:0,46,192
chr10	10716840	.	CGTGTGTGTGTGTGT	C	8549.50	PASS	AB=0.692;AC=31;AF=0.574;AN=54;BaseQRankSum=7.892;DP=575;FS=0.000;HRun=0;HaplotypeScore=213.9589;InbreedingCoeff=0.7595;MQ=55.17;MQ0=10;MQRankSum=-8.887;QD=26.55;ReadPosRankSum=1.359;VQSLOD=3.2206;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:31:45.15:0,45,2255	1/1:6,4:10:9.03:353,9,0	0/0:10,0:2:1.82:0,2,5	./.	0/0:10,0:13:18.06:0,18,854	0/0:9,0:12:14.36:0,14,619	0/0:26,0:33:23.92:0,24,1096	0/0:24,0:23:45.14:0,45,1435	0/0:22,0:30:27.08:0,27,907	1/1:16,4:20:6.09:304,6,0	1/1:14,3:16:3.48:55,3,0	1/1:9,10:20:24.08:944,24,0	1/1:16,13:29:26.81:1061,27,0	1/1:16,10:27:18.06:635,18,0	1/1:12,8:19:12.04:470,12,0	0/1:14,11:27:99:1090,0,150	1/1:13,7:18:2.39:230,2,0	1/1:10,6:17:15.05:569,15,0	0/0:20,0:21:21.07:0,21,956	0/0:12,0:14:9.03:0,9,398	0/0:17,0:21:27.07:0,27,1192	1/1:7,4:12:3.01:75,3,0	1/1:4,7:11:9.03:308,9,0	1/1:20,14:33:18.06:608,18,0	0/0:27,0:28:45.60:0,46,1714	1/1:22,7:28:21.07:788,21,0	1/1:14,6:20:18.06:708,18,0	1/1:6,3:9:9.03:352,9,0
chr10	10721948	.	T	TA	11742.07	PASS	AB=0.795;AC=46;AF=0.821;AN=56;BaseQRankSum=-0.958;DP=502;FS=3.694;HRun=8;HaplotypeScore=64.7798;InbreedingCoeff=0.8162;MQ=68.65;MQ0=5;MQRankSum=-1.094;QD=26.45;ReadPosRankSum=0.357;VQSLOD=5.6326;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,37:39:99:1142,99,0	1/1:0,2:2:6.02:69,6,0	0/1:15,0:10:2.03:2,0,69	0/0:14,0:8:9.93:0,10,67	1/1:2,30:33:89.90:982,90,0	0/0:19,0:19:45.02:0,45,412	0/0:12,0:12:23.75:0,24,215	1/1:5,19:22:51.13:569,51,0	0/0:13,0:13:36.02:0,36,329	1/1:5,14:19:45.12:508,45,0	1/1:2,21:23:54.63:622,55,0	1/1:4,13:16:39.11:448,39,0	1/1:2,16:18:45.60:520,46,0	1/1:2,9:11:27.08:312,27,0	1/1:3,14:16:42.12:480,42,0	1/1:0,8:8:24.03:261,24,0	1/1:3,22:25:51.15:587,51,0	1/1:4,18:22:26.37:537,26,0	0/1:4,9:13:1.10:218,0,1	1/1:1,19:20:54.16:623,54,0	1/1:2,13:15:36.11:415,36,0	1/1:1,5:6:15.04:173,15,0	1/1:1,9:10:20.98:242,21,0	1/1:2,21:23:63.13:701,63,0	1/1:0,15:15:36.11:415,36,0	1/1:4,22:26:69.12:766,69,0	1/1:2,15:17:42.12:485,42,0	1/1:6,19:24:35.72:664,36,0
chr10	10722035	.	G	GA	613.76	PASS	AB=0.956;AC=12;AF=0.214;AN=56;BaseQRankSum=3.874;DP=604;FS=4.869;HRun=14;HaplotypeScore=95.7355;InbreedingCoeff=0.3844;MQ=60.11;MQ0=26;MQRankSum=-3.200;QD=2.54;ReadPosRankSum=-3.478;VQSLOD=-0.2827;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:29:3.99:0,4,228	0/1:8,1:9:6.42:6,0,82	0/1:44,0:14:12.55:13,0,27	0/1:58,0:15:2.62:3,0,35	0/0:13,0:16:23.76:0,24,133	1/1:12,7:21:32.34:279,32,0	1/1:12,5:18:9.02:181,9,0	0/0:18,1:20:12.15:0,12,183	1/1:9,6:15:32.91:267,33,0	0/0:13,0:13:19.69:0,20,121	0/1:14,1:15:9.62:10,0,65	0/0:17,0:18:33.46:0,33,197	0/0:17,0:18:27.62:0,28,165	0/0:17,0:17:41.33:0,41,266	0/0:17,0:17:31.54:0,32,197	0/0:25,0:28:59.23:0,59,363	0/0:25,1:28:24.94:0,25,272	0/0:29,0:30:72.81:0,73,464	0/0:15,0:13:23.47:0,23,150	0/0:22,1:24:15.55:0,16,200	0/1:23,1:25:3.77:4,0,219	0/0:8,0:11:20.88:0,21,114	0/0:8,0:9:13.76:0,14,81	0/0:21,0:21:40.41:0,40,256	0/0:13,0:13:20.56:0,21,134	0/1:26,1:29:0.22:0,0,217	0/0:16,0:17:3.66:0,4,109	0/0:8,0:8:1.91:0,2,6
chr10	10722051	.	G	GA	837.92	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=4.855;DP=667;FS=2.935;HRun=8;HaplotypeScore=87.4500;InbreedingCoeff=0.8305;MQ=70.95;MQ0=15;MQRankSum=-3.510;QD=6.65;ReadPosRankSum=2.755;VQSLOD=0.9346;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:58.77:0,59,496	0/0:12,0:12:33:0,33,296	0/0:73,0:29:42.10:0,42,364	0/1:71,0:22:22.76:23,0,169	0/0:20,0:20:29.15:0,29,422	1/1:3,19:22:35.44:385,35,0	1/1:4,14:18:29.92:312,30,0	0/0:36,0:35:64.61:0,65,707	1/1:1,14:15:24.06:267,24,0	0/0:21,0:22:62.98:0,63,560	0/0:13,0:13:23.97:0,24,214	0/0:19,0:19:46.78:0,47,402	0/0:20,0:20:50.97:0,51,452	0/0:18,0:18:45:0,45,405	0/0:17,0:17:48.02:0,48,437	0/0:26,0:26:68.87:0,69,614	0/0:31,0:30:56.37:0,56,577	0/0:33,0:33:83.95:0,84,749	0/0:19,0:18:44.99:0,45,402	0/0:19,0:19:34.76:0,35,337	0/0:24,0:24:59.70:0,60,523	0/0:11,0:11:20.96:0,21,183	0/0:8,0:8:20.04:0,20,168	0/0:23,0:23:25.50:0,26,472	0/0:16,0:16:45.02:0,45,407	0/0:31,0:31:74.96:0,75,665	0/0:17,0:15:38.98:0,39,344	0/0:7,0:7:18.01:0,18,162
chr10	10723201	.	TTCTCTCTC	T	929.36	PASS	AB=0.812;AC=28;AF=0.737;AN=38;BaseQRankSum=4.043;DP=509;FS=2.623;HRun=0;HaplotypeScore=178.0667;InbreedingCoeff=0.3910;MQ=68.58;MQ0=7;MQRankSum=-3.738;QD=3.62;ReadPosRankSum=-1.602;VQSLOD=2.5889;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	1/1:11,0:12:3.01:51,3,0	./.	./.	0/0:12,0:12:8.99:0,9,89	1/1:7,0:8:3.01:56,3,0	./.	./.	./.	1/1:21,1:21:3.01:71,3,0	./.	0/1:21,6:27:0.05:0,0,0	1/1:13,1:13:3.01:49,3,0	1/1:20,3:24:2.84:36,3,0	1/1:12,5:18:6.02:113,6,0	1/1:9,2:11:1.25:3,1,0	./.	1/1:13,0:14:3.01:56,3,0	1/1:15,0:16:3.01:60,3,0	0/1:19,0:24:0:0,0,0	0/0:21,0:22:3.01:0,3,74	./.	0/0:12,4:16:0:0,0,0	1/1:13,4:17:0.94:2,1,0	0/0:17,0:17:12.01:0,12,153	1/1:24,1:25:6.02:129,6,0	1/1:6,3:9:3.90:68,4,0	1/1:9,4:14:15.05:344,15,0
chr10	10723267	.	GCGCT	G	1926.26	PASS	AB=0.876;AC=42;AF=0.778;AN=54;BaseQRankSum=-0.471;DP=436;FS=3.355;HRun=0;HaplotypeScore=164.9444;InbreedingCoeff=0.2008;MQ=53.65;MQ0=13;MQRankSum=-2.069;QD=4.99;ReadPosRankSum=0.296;VQSLOD=2.8056;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:32:33.94:34,0,70	1/1:7,2:9:11.72:72,12,0	0/0:10,0:3:2.15:0,2,44	0/1:22,0:12:5.52:6,0,148	0/0:14,0:13:2.73:0,3,26	0/1:14,0:14:19.57:20,0,188	0/1:19,0:19:20.89:21,0,37	1/1:12,1:10:21.21:150,21,0	0/0:8,0:7:2.99:0,3,23	1/1:0,19:19:40.17:306,40,0	0/1:8,3:11:0:0,0,0	1/1:11,3:13:8.95:69,9,0	1/1:13,1:14:38.27:303,38,0	1/1:14,4:15:8.98:128,9,0	1/1:2,16:18:3.01:38,3,0	1/1:0,10:10:2.84:14,3,0	1/1:2,17:19:3.01:49,3,0	1/1:1,15:16:2.60:10,3,0	1/1:1,11:12:26.08:281,26,0	1/1:4,17:21:2.74:12,3,0	1/1:9,0:8:5.94:43,6,0	./.	1/1:12,3:15:2.91:24,3,0	0/1:1,19:19:0:0,0,0	1/1:16,0:15:5.86:35,6,0	1/1:1,19:20:41.89:276,42,0	1/1:2,13:14:8.09:72,8,0	1/1:8,0:8:11.76:98,12,0
chr10	10723269	.	GCT	G	1915.11	PASS	AB=1.000;AC=44;AF=0.815;AN=54;BaseQRankSum=-1.175;DP=436;FS=3.632;HRun=0;HaplotypeScore=158.8956;InbreedingCoeff=0.1497;MQ=54.18;MQ0=10;MQRankSum=-2.353;QD=4.76;ReadPosRankSum=-0.489;VQSLOD=2.6636;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:32:0.92:41,0,1	1/1:9,0:9:11.72:72,12,0	0/0:8,0:3:2.15:0,2,7	0/1:21,0:12:15.09:15,0,126	1/1:14,0:13:4.28:26,4,0	0/1:15,0:15:37.75:68,0,38	0/1:19,0:19:4.42:41,0,4	1/1:12,1:10:20.94:129,21,0	0/0:8,0:7:1.82:0,2,6	1/1:19,0:19:40.28:263,40,0	0/1:11,0:11:0.01:0,0,0	1/1:13,0:13:14.88:110,15,0	1/1:15,0:15:40.90:267,41,0	1/1:18,1:16:11.92:106,12,0	1/1:17,0:17:3:28,3,0	1/1:10,0:10:2.84:14,3,0	1/1:19,0:19:3.01:32,3,0	1/1:15,1:16:3.01:33,3,0	1/1:12,0:12:26.84:237,27,0	1/1:21,0:21:2.74:12,3,0	1/1:10,0:9:8.93:63,9,0	./.	1/1:14,1:15:2.58:24,3,0	0/1:20,0:19:0:0,0,0	1/1:15,2:16:5.97:64,6,0	1/1:20,0:20:42.24:244,42,0	1/1:15,0:14:8.19:57,8,0	1/1:7,1:8:11.79:83,12,0
chr10	10723640	.	C	CT	1362.22	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-7.430;DP=588;FS=10.828;HRun=7;HaplotypeScore=60.3609;InbreedingCoeff=0.9986;MQ=72.67;MQ0=2;MQRankSum=-0.318;QD=24.77;ReadPosRankSum=1.636;VQSLOD=3.7471;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,105,999	0/0:11,0:11:33:0,33,308	0/0:28,0:27:44.18:0,44,521	0/0:18,0:17:38.72:0,39,332	0/0:19,0:19:54.04:0,54,504	1/1:2,21:23:54.17:652,54,0	1/1:1,18:19:48.09:563,48,0	0/0:34,0:34:81.11:0,81,779	1/1:2,11:13:24.07:290,24,0	0/0:28,0:28:74.89:0,75,697	0/0:15,0:15:42.07:0,42,404	0/0:20,0:20:57.08:0,57,545	0/0:21,0:21:57.06:0,57,539	0/0:18,0:18:45.05:0,45,429	0/0:21,0:21:63.10:0,63,608	0/0:24,1:25:26.86:0,27,543	0/0:32,0:32:85.77:0,86,810	0/0:24,0:24:63.10:0,63,608	0/0:11,0:11:33.03:0,33,310	0/0:18,0:18:51.06:0,51,487	0/0:22,0:22:60.09:0,60,579	0/0:14,0:14:42.05:0,42,400	0/0:18,0:18:51.02:0,51,479	0/0:20,0:19:51.08:0,51,492	0/0:17,0:17:42.06:0,42,405	0/0:23,0:23:60.06:0,60,568	0/0:21,0:21:57.07:0,57,544	0/0:14,0:14:36.06:0,36,348
chr10	10723944	.	T	TA	4995.74	PASS	AB=0.678;AC=37;AF=0.661;AN=56;BaseQRankSum=-3.199;DP=599;FS=1.528;HRun=13;HaplotypeScore=80.0021;InbreedingCoeff=0.6252;MQ=75.90;MQ0=0;MQRankSum=-0.785;QD=10.77;ReadPosRankSum=-0.679;VQSLOD=4.3690;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:24:25.52:0,26,168	0/1:2,8:10:1.56:90,0,2	0/1:21,0:19:28.70:29,0,72	0/0:17,0:13:9.34:0,9,75	0/0:22,0:22:14.66:0,15,222	0/0:17,0:17:26.64:0,27,185	0/0:22,0:22:56.46:0,56,386	0/1:19,14:34:4.19:215,0,4	0/0:15,0:16:31.71:0,32,211	1/1:11,15:28:30.21:380,30,0	1/1:7,7:15:21.56:160,22,0	1/1:6,19:26:24.39:211,24,0	1/1:4,23:27:27.84:311,28,0	0/1:6,14:21:11.45:158,0,11	1/1:3,16:18:29.97:268,30,0	1/1:3,13:16:24.03:223,24,0	1/1:3,25:29:27.31:383,27,0	1/1:3,23:27:47.87:427,48,0	1/1:8,13:21:35.71:314,36,0	1/1:9,14:23:23.73:170,24,0	0/1:3,10:13:5.57:97,0,6	1/1:7,12:19:20.16:164,20,0	1/1:8,12:20:1.69:150,2,0	1/1:1,14:15:21.02:195,21,0	0/0:17,0:17:26.64:0,27,183	1/1:9,21:30:44.97:391,45,0	1/1:5,19:24:24.50:223,24,0	1/1:3,19:24:50.33:438,50,0
chr10	10724632	.	AG	A	7691.53	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=18.718;DP=700;FS=7.559;HRun=4;HaplotypeScore=295.2726;InbreedingCoeff=0.9855;MQ=76.54;MQ0=0;MQRankSum=-18.424;QD=15.32;ReadPosRankSum=3.117;VQSLOD=2.3039;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,132,1826	1/1:5,0:5:8.95:66,9,0	0/0:24,0:24:66.09:0,66,824	0/0:26,0:26:63.20:0,63,851	1/1:24,0:24:56.42:399,56,0	0/0:31,0:31:87.28:0,87,1199	0/0:34,0:34:99:0,99,1372	1/1:24,0:24:44.74:333,45,0	0/0:39,0:39:99:0,117,1617	1/1:26,0:26:43.79:314,44,0	1/1:12,2:14:17.88:131,18,0	1/1:40,0:40:95.32:696,95,0	1/1:33,0:33:77.50:571,78,0	1/1:22,0:22:54.49:392,54,0	1/1:36,4:40:77.38:557,77,0	1/1:31,1:31:74.56:552,75,0	1/1:18,0:18:29.82:220,30,0	1/1:23,0:23:44.76:333,45,0	1/1:24,0:24:41.62:305,42,0	1/1:22,0:22:44.69:328,45,0	1/1:17,0:17:29.73:217,30,0	1/1:20,0:20:56.56:411,57,0	1/1:18,0:18:44.70:326,45,0	1/1:21,0:21:23.64:173,24,0	1/1:23,0:23:62.63:463,63,0	1/1:21,0:21:38.75:285,39,0	1/1:24,0:24:56.68:421,57,0	1/1:11,0:11:26.84:199,27,0
chr10	10724635	.	GGAGGAGGA	G	30143.24	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=18.620;DP=576;FS=8.747;HRun=0;HaplotypeScore=275.1743;InbreedingCoeff=0.9873;MQ=80.47;MQ0=0;MQRankSum=-18.937;QD=81.03;ReadPosRankSum=4.159;VQSLOD=3.7739;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,151,6289	1/1:0,3:3:9.03:261,9,0	0/0:24,0:24:69.21:0,69,2238	0/0:24,0:24:69.24:0,69,2463	1/1:0,20:20:60.15:1636,60,0	0/0:31,0:31:93.31:0,93,3932	0/0:35,0:35:99:0,105,4245	1/1:0,15:15:45.15:1330,45,0	0/0:39,0:39:99:0,117,5277	1/1:1,14:15:45.15:1308,45,0	1/1:2,9:11:23.86:548,24,0	1/1:2,30:32:96.32:2657,96,0	1/1:1,25:26:78.27:2206,78,0	1/1:1,18:19:57.20:1605,57,0	1/1:4,25:29:78.27:2191,78,0	1/1:1,25:25:75.26:2174,75,0	1/1:1,10:11:33.05:819,33,0	1/1:2,13:15:45.09:1191,45,0	1/1:1,13:14:42.13:1173,42,0	1/1:0,16:16:45.15:1291,45,0	1/1:2,11:13:33.05:886,33,0	1/1:1,18:19:57.18:1563,57,0	1/1:0,15:15:45.15:1290,45,0	1/1:1,10:11:27.04:703,27,0	1/1:0,21:21:63.22:1824,63,0	1/1:0,13:13:39.13:1149,39,0	1/1:1,18:19:57.18:1591,57,0	1/1:1,8:9:27.09:747,27,0
chr10	10724646	.	CA	C	12063.23	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=19.099;DP=574;FS=15.331;HRun=1;HaplotypeScore=263.5972;InbreedingCoeff=0.9874;MQ=76.68;MQ0=0;MQRankSum=-17.869;QD=31.91;ReadPosRankSum=2.927;VQSLOD=0.6415;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,150,2369	1/1:0,3:3:9.02:101,9,0	0/0:22,0:21:40.30:0,40,717	0/0:24,0:24:51.72:0,52,794	1/1:0,20:20:60.15:641,60,0	0/0:29,0:29:87.28:0,87,1363	0/0:31,0:31:93.30:0,93,1463	1/1:0,15:15:45.13:527,45,0	0/0:40,0:40:99:0,117,1847	1/1:0,15:15:45.09:512,45,0	1/1:1,9:10:27.06:289,27,0	1/1:2,30:32:96.03:1019,96,0	1/1:0,28:28:78.21:854,78,0	1/1:0,21:21:60.09:636,60,0	1/1:1,25:26:78.18:841,78,0	1/1:2,25:27:81.18:882,81,0	1/1:1,10:11:30.08:333,30,0	1/1:0,14:14:42.12:488,42,0	1/1:0,13:13:39.11:453,39,0	1/1:0,17:17:48.10:513,48,0	1/1:1,11:12:33.09:370,33,0	1/1:0,20:20:60.14:635,60,0	1/1:0,15:15:45.12:488,45,0	1/1:0,14:14:30.08:328,30,0	1/1:0,23:23:66.17:728,66,0	1/1:0,16:16:48.13:546,48,0	1/1:0,18:18:54.15:604,54,0	1/1:0,8:8:24.07:276,24,0
chr10	10727927	.	T	TC	331.01	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=1.511;DP=685;FS=11.264;HRun=0;HaplotypeScore=146.6143;InbreedingCoeff=0.8363;MQ=82.54;MQ0=0;MQRankSum=-2.181;QD=11.03;ReadPosRankSum=0.206;VQSLOD=4.0030;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:74.28:0,74,442	0/0:5,0:5:6.64:0,7,35	0/0:39,0:33:79.75:0,80,932	0/0:34,0:29:57.62:0,58,639	1/1:3,11:14:6.55:224,7,0	0/0:26,0:26:78.25:0,78,1071	0/0:28,0:28:81.25:0,81,1111	0/0:35,0:35:99:0,105,1450	0/0:26,0:26:78.26:0,78,1089	0/0:28,0:28:67.66:0,68,481	0/0:17,0:17:48.54:0,49,310	0/0:25,0:25:36.57:0,37,293	0/0:26,0:26:58.53:0,59,354	0/0:22,0:22:48.77:0,49,249	0/0:36,0:36:75.46:0,75,438	0/0:43,0:43:99:0,103,614	0/0:26,0:26:65.88:0,66,398	0/0:27,0:27:71.64:0,72,392	0/0:15,0:15:45.14:0,45,601	0/0:27,0:27:81.23:0,81,1083	0/0:28,0:28:81.24:0,81,1098	0/0:20,0:20:17.36:0,17,134	0/0:8,0:8:19.19:0,19,99	0/0:22,0:22:44.49:0,44,243	1/1:3,13:16:19.59:217,20,0	0/0:25,0:25:51.50:0,51,366	0/0:23,0:23:34.16:0,34,218	0/0:9,0:9:4.92:0,5,38
chr10	10727928	.	T	TC	10322.19	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=12.726;DP=693;FS=2.192;HRun=0;HaplotypeScore=115.5595;InbreedingCoeff=0.9660;MQ=82.51;MQ0=0;MQRankSum=-3.275;QD=23.84;ReadPosRankSum=6.679;VQSLOD=5.9342;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:8,27:35:62.70:739,63,0	1/1:0,5:5:12.04:139,12,0	0/0:39,0:33:76.14:0,76,912	0/0:35,0:30:49.66:0,50,627	1/1:15,0:15:13.33:226,13,0	0/0:27,0:27:78.25:0,78,1069	0/0:27,0:27:78.26:0,78,1086	0/0:35,0:35:99:0,102,1423	0/0:27,0:27:78.26:0,78,1079	1/1:3,27:30:71.20:787,71,0	1/1:3,14:17:26.44:333,26,0	1/1:5,23:29:48.13:574,48,0	1/1:4,21:26:51.75:621,52,0	1/1:0,22:23:56.96:650,57,0	1/1:5,32:37:86.59:995,87,0	1/1:14,29:43:92.23:1053,92,0	1/1:5,21:26:41.03:647,41,0	1/1:4,22:26:64.58:766,65,0	0/0:15,0:15:45.13:0,45,591	0/0:27,0:27:81.22:0,81,1076	0/0:28,0:28:81.25:0,81,1102	1/1:1,18:19:35.71:413,36,0	1/1:1,8:9:17.65:192,18,0	1/1:3,18:21:44.71:516,45,0	1/1:16,0:16:12.72:219,13,0	1/1:1,24:25:66.64:750,67,0	1/1:1,20:22:52.73:632,53,0	1/1:1,8:9:4.84:71,5,0
chr10	10727929	.	T	TCC	7848.09	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=13.951;DP=698;FS=1.851;HRun=7;HaplotypeScore=140.7609;InbreedingCoeff=0.9755;MQ=82.34;MQ0=0;MQRankSum=-3.474;QD=17.88;ReadPosRankSum=4.573;VQSLOD=1.8731;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:36,0:36:62.87:519,63,0	1/1:5,0:5:11.94:96,12,0	0/0:39,0:33:79.41:0,79,851	0/0:36,0:31:59.13:0,59,597	1/1:18,0:18:22.09:182,22,0	0/0:28,0:28:69.19:0,69,804	0/0:27,0:27:66.15:0,66,755	0/0:34,0:35:78.19:0,78,900	0/0:27,0:27:75.20:0,75,853	1/1:31,0:31:69.49:618,69,0	1/1:16,1:17:31.33:267,31,0	1/1:28,1:29:53.20:462,53,0	1/1:25,0:25:53.93:462,54,0	1/1:24,0:24:56.67:486,57,0	1/1:35,1:36:92.60:799,93,0	1/1:41,1:42:95.87:852,96,0	1/1:26,0:26:35.99:456,36,0	1/1:26,0:26:65.80:558,66,0	0/0:13,0:13:27.08:0,27,314	0/0:25,0:26:75.18:0,75,851	0/0:28,0:28:78.23:0,78,908	1/1:19,0:19:35.88:303,36,0	1/1:9,0:9:15.61:129,16,0	1/1:20,0:20:44.48:371,44,0	1/1:18,0:18:23.77:216,24,0	1/1:25,0:25:65.77:587,66,0	1/1:22,0:22:53.70:431,54,0	1/1:11,0:11:6:52,6,0
chr10	10728785	.	TCATCCATCCATC	T	1865.48	PASS	AB=0.929;AC=23;AF=0.676;AN=34;BaseQRankSum=-3.956;DP=420;FS=0.000;HRun=0;HaplotypeScore=98.0034;InbreedingCoeff=0.1706;MQ=24.87;MQ0=186;MQRankSum=1.998;QD=8.11;ReadPosRankSum=2.845;VQSLOD=1.3424;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	0/0:13,0:9:6.02:0,6,71	./.	./.	0/1:23,0:18:0:0,0,0	./.	./.	1/1:17,8:14:24.03:383,24,0	1/1:8,0:11:2.49:6,2,0	0/1:8,10:15:67.65:457,0,68	1/1:16,0:12:3.01:53,3,0	0/1:12,0:9:49.83:50,0,76	./.	1/1:16,0:6:3.01:52,3,0	0/0:23,0:14:3.01:0,3,120	0/1:11,0:5:0.07:0,0,0	1/1:12,0:4:6.02:104,6,0	1/1:8,0:3:3.01:57,3,0	1/1:5,7:8:21.06:407,21,0	0/0:9,5:12:0:0,0,0	./.	./.	./.	./.	1/1:14,0:10:6:53,6,0	0/1:18,0:9:6.35:253,0,6	1/1:29,0:18:6.02:95,6,0	./.
chr10	10728797	.	CCA	C	57.20	PASS	AB=0.896;AC=11;AF=0.324;AN=34;BaseQRankSum=1.788;DP=385;FS=0.000;HRun=0;HaplotypeScore=82.2182;InbreedingCoeff=0.0917;MQ=24.20;MQ0=180;MQRankSum=-0.255;QD=0.42;ReadPosRankSum=0.464;VQSLOD=1.4225;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	1/1:8,4:9:5.92:39,6,0	./.	./.	0/1:18,5:18:0.04:0,0,0	./.	./.	0/1:17,0:8:7.48:7,0,77	1/1:14,0:8:5.19:20,5,0	0/1:16,3:17:49.78:50,0,110	0/0:17,0:14:2.79:0,3,13	0/0:11,0:8:5.45:0,5,50	./.	0/0:15,0:6:2.84:0,3,14	0/0:21,0:12:3.01:0,3,40	0/1:9,0:4:0:0,0,0	0/0:10,0:3:8.73:0,9,68	0/0:5,0:2:2.68:0,3,11	0/1:11,0:7:16.68:17,0,43	0/1:10,2:10:0:0,0,0	./.	./.	./.	./.	0/1:12,7:12:28.40:28,0,75	0/0:18,0:7:18.85:0,19,102	0/0:22,0:12:5.58:0,6,40	./.
chr10	10731276	.	GT	G	6892.25	PASS	AB=0.553;AC=39;AF=0.696;AN=56;BaseQRankSum=2.587;DP=544;FS=4.613;HRun=11;HaplotypeScore=65.6469;InbreedingCoeff=0.8682;MQ=59.14;MQ0=4;MQRankSum=1.262;QD=17.45;ReadPosRankSum=2.513;VQSLOD=6.0488;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,39:48:93.41:894,93,0	1/1:0,6:6:11.98:98,12,0	0/0:18,0:11:10.25:0,10,90	0/0:9,0:7:7.57:0,8,64	0/0:5,0:27:47.62:0,48,263	1/1:1,15:16:38.95:320,39,0	1/1:4,21:25:18.96:362,19,0	0/0:19,1:19:42.09:0,42,438	1/1:2,8:10:20.97:172,21,0	1/1:8,19:27:54.76:427,55,0	1/1:2,10:12:23.96:197,24,0	1/1:2,19:21:47.93:394,48,0	1/1:0,15:15:35.96:295,36,0	1/1:3,12:15:29.96:246,30,0	1/1:6,21:26:55.75:448,56,0	1/1:4,19:23:50.91:419,51,0	1/1:4,29:33:62.90:517,63,0	1/1:3,15:18:4.63:240,5,0	0/0:22,0:23:53.94:0,54,544	0/0:16,0:16:39.10:0,39,415	0/0:20,0:20:42.11:0,42,448	1/1:2,11:13:35.93:291,36,0	1/1:2,6:8:20.97:171,21,0	1/1:2,15:17:38.95:320,39,0	0/0:1,0:15:31.25:0,31,156	1/1:1,18:19:50.81:403,51,0	0/1:4,17:21:15.61:297,0,16	1/1:2,18:20:21.92:380,22,0
chr10	10731477	.	ACAGGGGCTTTGG	A	20127.54	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=14.899;DP=507;FS=0.354;HRun=0;HaplotypeScore=217.6194;InbreedingCoeff=0.9437;MQ=81.91;MQ0=0;MQRankSum=-16.683;QD=80.19;ReadPosRankSum=7.091;VQSLOD=4.3071;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,129,7651	1/1:0,4:4:12.04:451,12,0	0/0:16,0:16:42.14:0,42,2329	0/0:21,0:21:63.18:0,63,3082	0/0:9,0:9:27.09:0,27,1522	0/0:16,0:16:48.15:0,48,2537	0/0:21,0:21:48.16:0,48,2805	0/0:41,0:41:99:0,123,6279	0/0:12,0:12:33.11:0,33,2035	1/1:5,15:19:45.15:1516,45,0	1/1:0,3:3:9.03:263,9,0	1/1:4,26:30:69.24:2569,69,0	1/1:4,17:21:51.17:1917,51,0	1/1:5,12:17:30.10:1128,30,0	1/1:4,27:31:75.26:2821,75,0	1/1:5,25:30:69.24:2581,69,0	1/1:4,12:16:30.06:1035,30,0	1/1:6,14:20:36.12:1348,36,0	0/0:23,0:23:69.24:0,69,3638	0/0:9,0:9:27.09:0,27,1546	0/0:33,0:33:90.30:0,90,4992	1/1:2,6:7:12.04:436,12,0	1/1:1,2:3:6.02:226,6,0	1/1:4,13:17:24.08:902,24,0	0/0:10,0:10:30.02:0,30,1437	1/1:3,8:11:24.08:903,24,0	1/1:1,18:18:51.18:1918,51,0	1/1:0,1:1:3.01:113,3,0
chr10	10732444	.	AT	A	6893.78	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=6.711;DP=483;FS=0.521;HRun=12;HaplotypeScore=52.6337;InbreedingCoeff=0.8904;MQ=69.44;MQ0=0;MQRankSum=-1.234;QD=17.50;ReadPosRankSum=4.228;VQSLOD=5.7090;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,29:31:81.78:615,82,0	1/1:0,4:4:8.95:70,9,0	0/0:8,0:7:7.29:0,7,57	0/0:6,0:6:4.47:0,4,21	1/1:2,10:13:22.92:168,23,0	1/1:1,19:21:52.84:401,53,0	1/1:3,18:23:50.93:366,51,0	0/0:21,0:21:48.05:0,48,471	1/1:2,14:16:2.44:202,2,0	1/1:2,18:20:50.68:383,51,0	1/1:2,10:12:29.88:232,30,0	1/1:2,23:25:65.74:511,66,0	1/1:2,13:15:29.88:232,30,0	1/1:3,14:18:34.89:261,35,0	1/1:4,12:16:35.86:279,36,0	1/1:0,20:21:40.89:308,41,0	1/1:3,26:30:73.71:563,74,0	1/1:2,18:21:49.84:377,50,0	0/0:15,1:16:12.42:0,12,291	0/0:13,1:14:12.82:0,13,302	0/0:21,2:23:27.85:0,28,453	1/1:0,8:8:17.88:134,18,0	1/1:0,8:9:22.83:168,23,0	1/1:5,15:21:41.73:310,42,0	1/1:3,18:22:49.84:377,50,0	1/1:3,19:23:58.78:443,59,0	1/1:0,14:14:35.86:279,36,0	1/1:1,9:11:28.93:215,29,0
chr10	10733129	.	C	CT	301.51	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=1.777;DP=358;FS=4.754;HRun=3;HaplotypeScore=46.3660;InbreedingCoeff=0.6193;MQ=84.01;MQ0=1;MQRankSum=3.654;QD=4.86;ReadPosRankSum=-2.540;VQSLOD=-0.4987;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:45.60:0,46,559	0/0:5,0:5:15.05:0,15,192	0/1:28,0:22:17.91:18,0,394	0/0:19,0:16:26.34:0,26,415	1/1:4,15:19:32.95:364,33,0	0/0:10,0:10:27.08:0,27,339	0/0:7,0:7:15.05:0,15,187	0/0:11,0:11:33.10:0,33,411	0/0:8,0:8:15.05:0,15,190	0/0:8,0:8:9.03:0,9,117	0/0:10,0:10:17.76:0,18,230	0/0:22,0:22:48.13:0,48,584	0/0:8,0:8:9.03:0,9,108	0/0:20,0:20:42.01:0,42,494	0/0:15,0:15:39.13:0,39,500	0/0:14,0:13:33.10:0,33,415	0/0:16,0:16:33.11:0,33,426	0/0:14,0:14:39.02:0,39,464	0/0:15,0:15:39.09:0,39,454	0/0:7,0:7:18.04:0,18,214	0/0:6,0:6:12.04:0,12,152	0/0:14,0:14:36.08:0,36,419	0/0:7,0:7:15.05:0,15,191	0/0:10,0:10:24.06:0,24,289	1/1:2,13:15:3.48:38,3,0	0/0:7,0:7:18.06:0,18,233	0/0:18,0:18:48.13:0,48,598	0/0:5,0:5:15.05:0,15,187
chr10	10733740	.	C	CT	22988.12	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-13.023;DP=776;FS=1.599;HRun=1;HaplotypeScore=72.4416;InbreedingCoeff=0.9994;MQ=81.40;MQ0=0;MQRankSum=-5.427;QD=36.20;ReadPosRankSum=4.608;VQSLOD=5.0985;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,45:45:99:1658,111,0	1/1:0,11:11:27.09:404,27,0	0/0:38,0:36:84.14:0,84,1087	0/0:28,0:27:51.90:0,52,648	1/1:2,22:24:60.03:779,60,0	0/0:22,0:22:63.18:0,63,790	0/0:24,0:24:62.89:0,63,771	1/1:1,29:30:87.23:1172,87,0	0/0:29,0:29:87.27:0,87,1116	1/1:1,27:28:78.25:1134,78,0	1/1:1,13:14:27.09:404,27,0	1/1:1,35:36:87.29:1302,87,0	1/1:2,39:41:90.30:1342,90,0	1/1:1,21:22:54.18:807,54,0	1/1:1,34:35:84.28:1258,84,0	1/1:1,43:44:96.33:1438,96,0	1/1:0,29:29:78.26:1167,78,0	1/1:2,19:21:45.15:674,45,0	1/1:0,40:40:99:1641,120,0	1/1:0,20:20:57.14:806,57,0	1/1:1,40:41:96.33:1438,96,0	1/1:3,13:16:36.12:539,36,0	1/1:0,15:15:36.12:539,36,0	1/1:0,30:30:78.26:1167,78,0	1/1:0,18:18:33.11:494,33,0	1/1:0,36:36:99:1355,102,0	1/1:1,25:26:63.21:930,63,0	1/1:0,13:13:36.12:538,36,0
chr10	10736838	.	G	GT	16120.12	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-15.867;DP=719;FS=7.871;HRun=7;HaplotypeScore=61.0593;InbreedingCoeff=0.9998;MQ=86.52;MQ0=0;MQRankSum=-2.778;QD=31.80;ReadPosRankSum=1.102;VQSLOD=4.7261;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:84.11:0,84,804	1/1:1,9:10:30.09:358,30,0	0/0:26,0:26:62.22:0,62,567	0/0:23,0:23:45.06:0,45,427	0/0:34,0:34:90.14:0,90,869	0/0:32,0:32:93.13:0,93,891	0/0:23,0:23:57.06:0,57,543	1/1:9,40:49:99:1387,117,0	0/0:19,0:19:51.05:0,51,484	1/1:4,30:34:93.19:1093,93,0	1/1:1,24:25:69.17:817,69,0	1/1:1,27:28:81.25:979,81,0	1/1:3,23:26:69.21:830,69,0	1/1:2,18:20:48.15:580,48,0	1/1:4,24:28:72.22:870,72,0	1/1:1,31:32:90.28:1087,90,0	1/1:4,19:23:48.15:580,48,0	1/1:2,21:23:57.17:687,57,0	1/1:4,28:32:84.15:944,84,0	1/1:1,29:30:87.22:1034,87,0	1/1:3,17:20:48.15:580,48,0	1/1:1,26:27:75.23:905,75,0	1/1:0,15:15:45.14:544,45,0	1/1:0,19:19:54.17:652,54,0	0/0:26,0:26:75.12:0,75,724	1/1:0,24:24:72.18:852,72,0	1/1:5,27:32:81.25:979,81,0	1/1:0,10:10:30.09:362,30,0
chr10	10738485	.	T	TAAAA	6278.58	PASS	AB=1.000;AC=47;AF=0.839;AN=56;BaseQRankSum=-1.318;DP=626;FS=0.000;HRun=16;HaplotypeScore=130.5646;InbreedingCoeff=0.6140;MQ=70.36;MQ0=2;MQRankSum=-0.644;QD=11.39;ReadPosRankSum=-5.313;VQSLOD=-0.1082;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:12,29:50:12.40:193,12,0	1/1:22,0:22:26.24:348,26,0	0/0:24,0:15:3.57:0,4,87	0/0:15,0:13:4.84:0,5,27	1/1:10,0:28:27.20:233,27,0	0/1:10,0:15:20.23:20,0,97	0/0:8,0:16:11.33:0,11,94	1/1:37,0:34:55.74:530,56,0	0/0:8,0:20:16.69:0,17,140	1/1:24,0:24:34.92:346,35,0	1/1:5,0:15:20.93:205,21,0	1/1:23,0:23:43.92:611,44,0	1/1:16,0:16:39.04:543,39,0	1/1:7,0:15:5.98:70,6,0	1/1:7,1:17:3.01:56,3,0	1/1:12,8:27:8.19:62,8,0	1/1:42,0:42:30.80:342,31,0	1/1:10,3:24:4.83:62,5,0	1/1:5,0:19:40.93:318,41,0	1/1:9,0:20:29.54:275,30,0	1/1:22,0:21:24.85:250,25,0	1/1:12,0:12:5.96:54,6,0	1/1:6,0:15:3.48:38,3,0	1/1:15,0:15:35.24:405,35,0	1/1:18,0:20:27:194,27,0	1/1:16,0:31:41.03:436,41,0	1/1:19,0:19:29.24:352,29,0	1/1:9,2:20:23.97:335,24,0
chr10	10739275	.	GT	G	2413.36	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.877;DP=753;FS=7.856;HRun=4;HaplotypeScore=70.4015;InbreedingCoeff=0.9889;MQ=84.23;MQ0=0;MQRankSum=-2.099;QD=32.18;ReadPosRankSum=1.610;VQSLOD=4.1939;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:87.29:0,87,1217	0/0:15,0:15:42.13:0,42,573	0/0:28,0:28:81.25:0,81,1054	0/0:18,0:18:51.17:0,51,684	0/0:37,0:37:99:0,105,1446	1/1:0,30:30:87.27:1044,87,0	1/1:0,11:11:33.10:396,33,0	0/0:31,0:31:93.31:0,93,1302	1/1:1,33:34:93.29:1116,93,0	0/0:40,0:40:99:0,111,1519	0/0:42,0:42:99:0,120,1680	0/0:29,0:29:78.26:0,78,1092	0/0:35,0:35:99:0,105,1439	0/0:21,0:21:60.18:0,60,807	0/0:36,0:36:99:0,105,1471	0/0:25,0:25:72.24:0,72,1008	0/0:24,0:24:69.23:0,69,957	0/0:29,0:29:84.28:0,84,1176	0/0:23,0:23:48.20:0,48,804	0/0:28,0:28:81.27:0,81,1134	0/0:18,0:18:48.16:0,48,670	0/0:30,0:30:87.29:0,87,1218	0/0:27,0:27:75.24:0,75,1034	0/0:12,0:12:33.11:0,33,461	0/0:25,0:25:72.24:0,72,1008	0/0:28,0:28:84.28:0,84,1170	0/0:40,0:39:99:0,120,1662	0/0:5,0:5:12.04:0,12,168
chr10	10740827	.	T	TC	11738.12	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=20.938;DP=881;FS=1.139;HRun=2;HaplotypeScore=104.4013;InbreedingCoeff=1.0000;MQ=81.86;MQ0=0;MQRankSum=-8.693;QD=38.74;ReadPosRankSum=0.297;VQSLOD=4.6982;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,46:47:99:1507,108,0	0/0:16,0:16:48.16:0,48,665	0/0:21,0:21:57.16:0,57,747	0/0:25,0:25:67.66:0,68,944	1/1:2,21:23:63.21:888,63,0	1/1:0,29:29:84.28:1182,84,0	1/1:0,27:27:72.24:1026,72,0	1/1:0,25:25:75.18:1006,75,0	1/1:0,42:42:99:1712,120,0	0/0:37,0:37:99:0,108,1495	0/0:25,0:25:75.25:0,75,1042	0/0:51,0:51:99:0,154,2136	0/0:30,0:30:90.28:0,90,1239	0/0:41,0:41:99:0,120,1673	0/0:61,0:61:99:0,184,2535	0/0:65,0:65:99:0,190,2605	0/0:22,0:22:66.14:0,66,849	0/0:24,0:24:69.23:0,69,959	1/1:1,16:17:49.05:697,49,0	1/1:0,38:38:99:1559,110,0	1/1:0,39:39:99:1531,108,0	0/0:23,0:23:69.22:0,69,946	0/0:30,0:30:87.29:0,87,1216	0/0:26,0:26:78.21:0,78,1037	1/1:0,16:16:45.15:629,45,0	0/0:43,0:43:99:0,129,1789	0/0:25,0:24:75.22:0,75,1006	0/0:13,0:13:39.13:0,39,545
chr10	10746686	.	AC	A	1125	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=4.687;DP=750;FS=2.302;HRun=2;HaplotypeScore=87.9003;InbreedingCoeff=0.9979;MQ=83.95;MQ0=0;MQRankSum=-0.976;QD=26.79;ReadPosRankSum=0.577;VQSLOD=3.3638;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,102,1521	0/0:15,0:15:45.15:0,45,669	0/0:21,0:21:60.20:0,60,865	0/0:23,0:23:65.65:0,66,878	1/1:0,22:22:48.15:623,48,0	0/0:15,0:15:45.15:0,45,674	0/0:35,0:35:99:0,105,1552	0/0:38,0:38:99:0,111,1627	0/0:19,0:19:57.19:0,57,853	0/0:25,0:25:75.25:0,75,1104	0/0:18,0:18:51.17:0,51,761	0/0:41,0:41:99:0,120,1733	0/0:25,0:25:75.24:0,75,1103	0/0:23,0:23:69.21:0,69,994	0/0:37,0:36:99:0,108,1616	0/0:34,0:34:99:0,102,1529	0/0:44,0:44:99:0,132,1977	0/0:21,0:21:63.21:0,63,944	0/0:19,0:19:57.15:0,57,828	0/0:22,0:22:66.22:0,66,989	0/0:66,0:66:99:0,196,2878	0/0:32,0:32:90.28:0,90,1302	0/0:23,0:23:69.22:0,69,1011	0/0:19,0:19:57.19:0,57,852	1/1:2,18:20:48.16:623,48,0	0/0:22,0:22:66.22:0,66,979	0/0:28,0:28:78.26:0,78,1166	0/0:8,0:8:21.07:0,21,315
chr10	10752114	.	GAGT	G	2605.17	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.650;DP=819;FS=0.000;HRun=0;HaplotypeScore=114.3236;InbreedingCoeff=0.9999;MQ=79.03;MQ0=0;MQRankSum=-3.262;QD=39.47;ReadPosRankSum=-0.328;VQSLOD=4.4078;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,153,3369	0/0:13,0:13:33.11:0,33,748	0/0:17,0:17:42.14:0,42,902	0/0:21,0:21:60.17:0,60,1238	0/0:19,0:19:54.19:0,54,1209	1/1:0,16:16:45.15:750,45,0	1/1:2,30:32:69.23:1099,69,0	0/0:26,0:26:72.23:0,72,1511	1/1:0,18:18:54.18:899,54,0	0/0:44,0:44:99:0,123,2712	0/0:15,0:15:39.13:0,39,872	0/0:51,0:51:99:0,147,3151	0/0:34,0:34:93.32:0,93,2081	0/0:51,0:51:99:0,144,3256	0/0:51,0:51:99:0,148,3318	0/0:37,0:37:99:0,105,2379	0/0:29,0:29:84.29:0,84,1900	0/0:25,0:25:69.24:0,69,1538	0/0:31,0:31:90.31:0,90,2003	0/0:22,0:22:66.23:0,66,1495	0/0:52,0:52:99:0,148,3312	0/0:26,0:26:75.26:0,75,1699	0/0:16,0:16:45.15:0,45,999	0/0:24,0:24:69.24:0,69,1564	0/0:22,0:22:63.22:0,63,1405	0/0:35,0:35:99:0,102,2312	0/0:26,0:26:78.27:0,78,1763	0/0:15,0:15:42.14:0,42,930
chr10	10753558	.	G	GGGCCCA	1519.87	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=2.024;DP=613;FS=1.886;HRun=0;HaplotypeScore=129.5602;InbreedingCoeff=0.8248;MQ=67.00;MQ0=1;MQRankSum=-4.232;QD=37.07;ReadPosRankSum=-1.395;VQSLOD=3.3241;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,105,2079	0/0:13,0:13:33:0,33,519	0/0:3,0:3:2.96:0,3,19	0/0:8,0:8:1.56:0,2,18	1/1:4,18:24:35.93:1040,36,0	0/0:13,0:13:24.07:0,24,484	0/0:36,0:36:84.14:0,84,1633	0/0:33,0:33:66.16:0,66,1259	0/0:11,0:11:27.09:0,27,588	0/0:25,0:25:57.20:0,57,1243	0/0:14,0:14:36:0,36,696	0/0:27,0:27:69.14:0,69,1276	0/0:14,0:14:33.03:0,33,631	0/0:20,0:20:42.09:0,42,810	0/0:15,0:15:36.11:0,36,747	0/0:19,0:19:42.10:0,42,865	0/0:42,0:42:99:0,108,2092	0/0:31,0:31:81.11:0,81,1506	0/0:21,0:21:45.01:0,45,719	0/0:14,0:14:30.05:0,30,529	0/0:38,0:38:99:0,105,1858	0/0:21,0:21:47.92:0,48,890	0/0:22,0:22:63.19:0,63,1292	0/0:30,0:30:78.17:0,78,1569	1/1:1,15:16:18.06:599,18,0	0/0:24,0:24:60.09:0,60,1161	0/0:19,0:19:48.02:0,48,940	0/0:16,0:16:48.15:0,48,1007
chr10	10754134	.	TC	T	3178.03	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=8.914;DP=703;FS=0.403;HRun=4;HaplotypeScore=70.7536;InbreedingCoeff=0.9626;MQ=93.14;MQ0=0;MQRankSum=-2.199;QD=29.16;ReadPosRankSum=-0.436;VQSLOD=3.3148;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,144,1962	0/0:2,0:2:6.02:0,6,84	0/0:29,0:29:78.52:0,79,1017	0/0:31,0:31:81.37:0,81,1039	0/0:23,0:23:66.21:0,66,903	0/0:22,0:22:63.20:0,63,866	0/0:38,0:38:99:0,108,1495	1/1:2,24:26:69.03:818,69,0	0/0:13,0:13:36.11:0,36,488	0/0:29,0:29:78.25:0,78,1078	0/0:10,0:10:30.09:0,30,403	0/0:33,0:33:96.31:0,96,1329	0/0:29,0:29:87.29:0,87,1217	0/0:38,0:38:99:0,111,1536	0/0:27,0:27:75.24:0,75,1030	0/0:33,0:33:93.30:0,93,1283	0/0:35,0:35:99:0,105,1454	0/0:30,0:30:87.24:0,87,1165	1/1:4,14:18:42.13:504,42,0	1/1:1,11:12:27.08:324,27,0	1/1:2,51:53:99:1692,141,0	0/0:19,0:19:57.18:0,57,779	0/0:17,0:17:48.16:0,48,671	0/0:24,0:24:72.24:0,72,1007	0/0:17,0:17:51.14:0,51,690	0/0:23,0:23:66.20:0,66,893	0/0:19,0:19:54.18:0,54,756	0/0:4,0:4:11.97:0,12,95
chr10	10756004	.	G	GCCA	2184.63	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-3.059;DP=733;FS=7.725;HRun=0;HaplotypeScore=107.3392;InbreedingCoeff=0.9959;MQ=77.35;MQ0=0;MQRankSum=-0.609;QD=48.55;ReadPosRankSum=0.575;VQSLOD=5.8126;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:61,0:61:99:0,178,2885	0/0:10,0:10:24.05:0,24,345	0/0:17,0:18:39.95:0,40,683	0/0:14,0:14:19.70:0,20,322	1/1:2,15:17:39.13:880,39,0	0/0:33,0:33:99:0,99,1598	0/0:29,0:29:87.30:0,87,1442	0/0:25,0:25:63.21:0,63,1026	0/0:12,0:12:36.12:0,36,599	0/0:31,0:31:90.30:0,90,1498	0/0:13,0:13:39.13:0,39,643	0/0:27,0:27:75.26:0,75,1249	0/0:28,0:28:75.24:0,75,1207	0/0:27,0:27:72.25:0,72,1198	0/0:34,0:34:99:0,102,1695	0/0:34,0:34:99:0,99,1648	0/0:36,0:36:99:0,105,1670	0/0:27,0:27:81.24:0,81,1319	0/0:18,0:18:51.16:0,51,817	0/0:24,0:24:63.22:0,63,1049	0/0:44,0:44:99:0,114,1879	0/0:23,0:23:63.20:0,63,1019	0/0:14,0:14:39.13:0,39,649	0/0:34,0:34:93.32:0,93,1548	1/1:4,24:28:63.22:1426,63,0	0/0:35,0:35:99:0,99,1571	0/0:20,0:20:57.19:0,57,939	0/0:17,0:17:51.17:0,51,838
chr10	10756075	.	CAGAG	C	2802.20	PASS	AB=0.940;AC=40;AF=0.769;AN=52;BaseQRankSum=4.123;DP=671;FS=6.523;HRun=0;HaplotypeScore=118.5595;InbreedingCoeff=0.5889;MQ=61.05;MQ0=11;MQRankSum=0.586;QD=5.53;ReadPosRankSum=1.753;VQSLOD=1.3581;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:30,19:49:3.95:48,4,0	1/1:5,4:9:3.01:46,3,0	./.	./.	0/0:21,0:21:12.01:0,12,163	0/0:26,0:26:12.04:0,12,268	0/0:28,0:34:35.56:0,36,619	0/1:25,0:25:0:0,0,0	0/1:19,0:22:3.73:4,0,597	1/1:24,0:25:8.99:92,9,0	1/1:6,4:10:2.91:46,3,0	1/1:19,10:30:8.24:100,8,0	1/1:21,7:31:21.02:263,21,0	1/1:19,11:32:21.06:307,21,0	1/1:19,15:32:17.76:279,18,0	1/1:22,7:30:14.39:170,14,0	1/1:12,5:17:9.03:139,9,0	1/1:7,13:20:27.09:418,27,0	1/1:21,0:21:4.25:31,4,0	1/1:13,0:19:2.94:10,3,0	0/0:22,0:25:0:0,0,0	1/1:15,4:19:17.41:208,17,0	1/1:13,0:15:2.97:20,3,0	1/1:29,6:35:30.82:346,31,0	0/0:15,0:15:12.04:0,12,219	1/1:23,5:29:15.02:187,15,0	1/1:8,8:16:12.04:186,12,0	1/1:11,0:12:5.38:53,5,0
chr10	10756654	.	TCAGCTGCCTCAGCTGGA	T	1395.23	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.677;DP=860;FS=30.887;HRun=0;HaplotypeScore=378.6372;InbreedingCoeff=0.9028;MQ=76.02;MQ0=0;MQRankSum=-4.928;QD=37.71;ReadPosRankSum=-0.201;VQSLOD=1.6845;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,123,8695	0/0:10,0:10:27.09:0,27,2025	0/0:18,0:18:30.47:0,30,980	0/0:17,0:17:27.12:0,27,1007	1/1:4,8:12:3.15:145,3,0	0/0:21,0:21:48.16:0,48,3745	0/0:46,0:45:99:0,120,9105	0/0:30,0:30:63.22:0,63,4010	0/0:35,0:35:99:0,102,7474	0/0:29,0:29:75.26:0,75,4889	0/0:19,0:19:45.14:0,45,2925	0/0:57,0:57:99:0,151,11131	0/0:28,0:28:75.26:0,75,5668	0/0:39,0:39:99:0,105,7849	0/0:43,0:43:99:0,123,9045	0/0:45,0:45:99:0,117,8990	0/0:31,0:31:87.30:0,87,6621	0/0:37,0:37:99:0,105,7975	0/0:28,0:28:72.24:0,72,4170	0/0:13,0:13:27.09:0,27,1477	0/0:90,0:90:99:0,232,16039	0/0:21,0:21:51.17:0,51,3269	0/0:15,0:15:36.12:0,36,2450	0/0:35,0:35:99:0,99,7116	1/1:9,16:25:30.10:1359,30,0	0/0:33,0:33:87.30:0,87,6166	0/0:22,0:22:57.20:0,57,4229	0/0:18,0:18:54.19:0,54,3918
chr10	10758020	.	T	TTGTGTG	21031.94	PASS	AB=1.000;AC=54;AF=0.964;AN=56;BaseQRankSum=-5.217;DP=825;FS=9.873;HRun=0;HaplotypeScore=163.9481;InbreedingCoeff=0.1213;MQ=65.33;MQ0=13;MQRankSum=-4.996;QD=25.49;ReadPosRankSum=3.857;VQSLOD=3.8951;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:52:79.17:1021,79,0	1/1:2,7:11:14.92:436,15,0	0/1:48,0:26:21.05:21,0,331	0/1:41,0:32:6.32:6,0,713	1/1:2,0:24:44.81:494,45,0	1/1:11,1:30:38.55:1015,39,0	1/1:9,0:35:33.11:837,33,0	1/1:13,0:33:61.67:618,62,0	1/1:12,2:31:21.07:584,21,0	1/1:11,21:34:69.19:1690,69,0	1/1:3,6:10:18.06:414,18,0	1/1:10,24:34:45.15:1441,45,0	1/1:5,25:34:45.07:1423,45,0	1/1:7,16:24:23.86:800,24,0	1/1:8,28:36:48.16:1540,48,0	1/1:3,19:24:30.10:941,30,0	1/1:10,18:33:38.82:958,39,0	1/1:9,13:24:21.07:580,21,0	1/1:3,0:26:66.18:807,66,0	1/1:8,0:23:36.01:427,36,0	1/1:14,0:59:85.18:1090,85,0	1/1:7,13:21:14.95:282,15,0	1/1:6,10:19:8.42:300,8,0	1/1:9,17:29:21.07:701,21,0	1/1:7,0:24:31.08:425,31,0	1/1:10,14:25:36.57:801,37,0	1/1:7,20:28:30.57:1003,31,0	1/1:1,3:5:15.05:378,15,0
chr10	10758206	.	CT	C	1159.80	PASS	AB=0.830;AC=11;AF=0.196;AN=56;BaseQRankSum=-4.475;DP=598;FS=1.492;HRun=14;HaplotypeScore=103.3962;InbreedingCoeff=0.6167;MQ=71.37;MQ0=4;MQRankSum=2.995;QD=6.78;ReadPosRankSum=4.020;VQSLOD=2.9475;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:12,18:32:28.19:316,28,0	0/0:6,0:12:23.26:0,23,129	0/1:24,1:12:6.03:6,0,82	0/0:19,1:14:7.22:0,7,50	0/0:16,0:20:34.93:0,35,325	0/1:16,2:19:10.61:11,0,212	0/0:28,2:31:24.75:0,25,503	0/1:8,10:20:46.90:136,0,47	0/0:15,1:17:15.10:0,15,246	0/0:15,0:24:33.14:0,33,161	0/0:9,0:17:36.93:0,37,196	0/0:10,0:22:21.76:0,22,106	0/0:5,0:16:5.80:0,6,34	0/0:5,0:15:11.59:0,12,67	0/0:9,0:29:31.52:0,32,173	0/0:4,0:19:14.20:0,14,72	0/0:4,0:21:34.05:0,34,171	0/0:4,0:20:17.57:0,18,83	1/1:10,18:29:33.08:348,33,0	1/1:4,16:22:45.59:299,46,0	1/1:8,13:23:11.85:210,12,0	0/0:10,0:22:35.80:0,36,202	0/0:4,0:12:16.79:0,17,92	0/0:4,0:12:8.64:0,9,48	0/0:23,2:28:24.87:0,25,470	0/0:6,0:25:63.12:0,63,318	0/0:15,0:32:38.88:0,39,204	0/0:4,0:12:22.63:0,23,119
chr10	10759762	.	C	CAGTCTGGGCTCCTGATGTGG	68128.37	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=0.373;DP=848;FS=2.139;HRun=0;HaplotypeScore=332.7734;InbreedingCoeff=0.9869;MQ=81.19;MQ0=2;MQRankSum=-18.890;QD=116.46;ReadPosRankSum=2.127;VQSLOD=3.7397;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,140,6422	1/1:3,0:13:21.07:1564,21,0	0/0:28,0:27:45.35:0,45,1763	0/0:35,0:35:74.31:0,74,3677	1/1:7,0:20:27.09:1385,27,0	1/1:7,0:30:51.18:3730,51,0	1/1:23,0:40:60.21:4263,60,0	0/0:46,0:46:99:0,132,6146	1/1:8,0:24:42.14:3327,42,0	1/1:14,0:37:95.41:5793,95,0	1/1:9,0:22:33.07:1090,33,0	1/1:13,0:43:69.18:4735,69,0	1/1:9,1:28:60.21:4458,60,0	1/1:13,0:41:84.29:6744,84,0	1/1:10,0:44:75.26:6398,75,0	1/1:8,0:29:36.12:2985,36,0	1/1:4,0:20:21.07:1552,21,0	1/1:10,0:20:21.07:1602,21,0	0/0:34,0:34:93.31:0,93,4149	0/0:20,0:20:57.18:0,57,2897	0/0:51,0:51:99:0,144,7020	1/1:9,0:24:41.92:2151,42,0	1/1:13,0:29:33.58:1509,34,0	1/1:8,0:22:33.11:1754,33,0	1/1:7,0:25:35.90:2665,36,0	1/1:16,0:41:92.90:6340,93,0	1/1:15,0:26:54.14:3283,54,0	1/1:0,0:5:9.03:800,9,0
chr10	10764486	.	CCTAA	C	5031	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=12.773;DP=772;FS=2.367;HRun=0;HaplotypeScore=124.8681;InbreedingCoeff=0.9997;MQ=69.09;MQ0=1;MQRankSum=-3.547;QD=43.00;ReadPosRankSum=0.275;VQSLOD=5.3386;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,132,3513	0/0:9,0:9:27.07:0,27,623	0/0:31,0:31:93.32:0,93,2346	0/0:27,0:27:63.22:0,63,1592	0/0:28,0:28:78.27:0,78,2071	0/0:26,0:26:69.24:0,69,1827	0/0:34,0:34:93.30:0,93,2359	1/1:8,23:31:69.19:1207,69,0	0/0:29,0:29:84.29:0,84,2228	0/0:31,0:31:87.29:0,87,2234	0/0:19,0:19:54.19:0,54,1419	0/0:30,0:30:90.31:0,90,2393	0/0:27,0:27:75.26:0,75,1975	0/0:30,0:30:90.31:0,90,2386	0/0:36,0:36:99:0,105,2736	0/0:34,0:34:99:0,99,2576	0/0:29,0:29:84.29:0,84,2229	0/0:20,0:20:57.20:0,57,1521	1/1:2,13:15:39.10:636,39,0	1/1:3,20:23:48.16:893,48,0	1/1:3,45:47:99:2295,123,0	0/0:29,0:29:81.28:0,81,2103	0/0:15,0:15:45.15:0,45,1145	0/0:29,0:29:81.28:0,81,2139	0/0:22,0:22:63.22:0,63,1680	0/0:30,0:30:90.31:0,90,2373	0/0:26,0:26:78.27:0,78,2047	0/0:18,0:18:45.15:0,45,1186
chr10	10768799	.	G	GCCTT	29833.53	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=-18.002;DP=851;FS=15.795;HRun=0;HaplotypeScore=128.7221;InbreedingCoeff=0.9976;MQ=82.85;MQ0=3;MQRankSum=-7.870;QD=62.81;ReadPosRankSum=3.253;VQSLOD=6.2739;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:63,0:63:99:0,160,2925	1/1:1,14:15:42.14:1066,42,0	0/0:32,0:32:81.54:0,82,1327	0/0:20,0:21:51.17:0,51,894	0/0:26,0:26:78.27:0,78,1432	0/0:17,0:17:51.17:0,51,938	0/0:28,0:28:78.25:0,78,1383	0/0:31,0:31:87.29:0,87,1569	0/0:38,0:38:99:0,105,1892	1/1:6,34:40:99:2842,108,0	1/1:2,5:7:15.01:294,15,0	1/1:6,32:38:99:2476,99,0	1/1:2,24:29:72.25:1856,72,0	1/1:7,33:40:96.33:2466,96,0	1/1:4,40:43:99:2744,108,0	1/1:6,37:44:56.17:2775,56,0	1/1:7,21:29:66.23:1741,66,0	1/1:7,29:36:87.21:2179,87,0	0/0:22,0:22:63.21:0,63,1124	0/0:23,0:23:66.23:0,66,1214	0/0:46,0:46:99:0,114,2097	1/1:2,26:27:72.25:1871,72,0	1/1:4,11:15:36.04:779,36,0	1/1:8,17:25:51.15:1301,51,0	0/0:29,0:29:87.25:0,87,1534	1/1:3,36:40:99:2896,117,0	1/1:3,25:28:72.20:1837,72,0	1/1:0,10:10:27.09:713,27,0
chr10	10771589	.	GACACAC	G	2603.54	PASS	AB=0.666;AC=35;AF=0.729;AN=48;BaseQRankSum=3.042;DP=600;FS=4.150;HRun=0;HaplotypeScore=130.2105;InbreedingCoeff=0.2611;MQ=55.50;MQ0=15;MQRankSum=-2.620;QD=6.41;ReadPosRankSum=2.858;VQSLOD=2.4590;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:24:3.01:42,3,0	./.	./.	./.	./.	0/0:20,0:20:2.75:0,3,29	1/1:24,0:24:3.68:29,4,0	0/0:27,0:27:2.04:0,2,7	0/0:17,0:24:5.93:0,6,47	1/1:12,8:20:21.34:381,21,0	0/0:9,0:9:2.37:0,2,8	0/1:11,11:22:10.18:222,0,10	1/1:8,0:14:7.10:27,7,0	1/1:7,8:16:12.04:212,12,0	1/1:10,8:18:9.03:176,9,0	1/1:16,0:33:7.21:30,7,0	0/1:15,2:31:17.92:134,0,18	1/1:12,8:20:3.48:62,3,0	1/1:15,0:18:12.04:167,12,0	1/1:17,0:26:3.01:42,3,0	1/1:15,0:27:3.01:42,3,0	0/1:10,9:17:25.91:110,0,26	1/1:12,6:17:3.40:53,3,0	1/1:18,9:28:0.31:95,0,0	0/0:15,0:15:12.03:0,12,265	1/1:11,10:22:23.62:386,24,0	1/1:8,7:18:27.37:491,27,0	1/1:0,0:2:3.01:42,3,0
chr10	10771595	.	C	CAG	221.80	PASS	AB=0.847;AC=7;AF=0.125;AN=56;BaseQRankSum=2.495;DP=588;FS=0.000;HRun=0;HaplotypeScore=114.6173;InbreedingCoeff=0.4617;MQ=55.23;MQ0=16;MQRankSum=2.196;QD=2.26;ReadPosRankSum=-2.528;VQSLOD=1.8169;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:23:17.87:0,18,132	0/0:3,0:3:8.98:0,9,73	0/0:42,0:15:41.75:0,42,340	0/0:40,0:15:17.18:0,17,160	0/0:10,0:10:17.96:0,18,145	1/1:4,20:24:2.98:57,3,0	0/1:4,22:26:3.45:40,0,3	0/0:22,0:23:44.87:0,45,378	1/1:22,0:22:15.82:227,16,0	0/0:21,0:21:16.72:0,17,325	0/0:9,0:9:10.88:0,11,53	0/0:22,0:22:15.86:0,16,206	0/0:13,0:13:12.88:0,13,158	0/0:15,0:15:10.27:0,10,165	0/0:18,0:18:15.78:0,16,211	0/0:34,0:34:34.74:0,35,421	0/0:34,0:33:48.46:0,48,441	0/0:21,0:21:34.48:0,34,240	0/0:17,0:16:41.77:0,42,325	0/0:23,0:21:22.84:0,23,156	0/0:25,0:24:23.92:0,24,190	0/0:22,0:20:31.31:0,31,208	0/0:15,0:14:7.61:0,8,137	0/0:26,0:26:41.18:0,41,306	0/0:16,0:16:30:0,30,296	0/1:23,0:23:8.38:8,0,237	0/0:16,0:16:37.59:0,38,254	0/1:3,0:3:14.43:17,0,14
chr10	10771801	.	ATGTC	A	12929.91	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=9.636;DP=702;FS=11.109;HRun=0;HaplotypeScore=135.8601;InbreedingCoeff=0.9973;MQ=76.80;MQ0=2;MQRankSum=-3.234;QD=30.00;ReadPosRankSum=6.595;VQSLOD=3.4727;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:57:99:0,135,3087	1/1:5,7:12:21.07:340,21,0	0/0:32,0:30:47.60:0,48,973	0/0:32,0:29:48.13:0,48,1048	0/0:9,0:20:39.10:0,39,686	1/1:5,15:20:36.12:579,36,0	1/1:6,16:22:39.13:642,39,0	0/0:24,0:24:39.13:0,39,887	1/1:5,16:20:30.05:503,30,0	1/1:8,21:29:60.19:982,60,0	1/1:6,12:17:18.06:302,18,0	1/1:9,19:28:51.17:856,51,0	1/1:4,17:21:51.17:856,51,0	1/1:5,17:22:48.16:806,48,0	1/1:7,14:21:36.12:605,36,0	1/1:7,16:23:48.16:793,48,0	1/1:9,23:32:57.19:957,57,0	1/1:6,22:28:54.18:907,54,0	0/0:24,0:24:36.12:0,36,849	0/0:21,0:21:45.15:0,45,1116	0/0:47,0:47:99:0,105,2602	1/1:11,19:30:30.10:504,30,0	1/1:3,15:18:32.57:554,33,0	1/1:5,23:28:54.18:907,54,0	0/0:6,0:14:27.09:0,27,470	1/1:9,14:23:45.13:727,45,0	1/1:5,16:21:42.14:705,42,0	1/1:5,9:14:24.08:403,24,0
chr10	10772770	.	TCATC	T	12679.47	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=3.908;DP=709;FS=0.000;HRun=0;HaplotypeScore=133.1522;InbreedingCoeff=0.8419;MQ=71.19;MQ0=5;MQRankSum=1.613;QD=20.99;ReadPosRankSum=3.428;VQSLOD=4.6976;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,19:29:3.01:45,3,0	1/1:1,8:9:15.05:232,15,0	0/0:35,0:21:15.02:0,15,231	0/0:29,0:22:25.52:0,26,537	0/0:15,0:15:30.10:0,30,728	1/1:4,11:15:15.05:245,15,0	1/1:10,16:26:24.04:392,24,0	1/1:37,0:37:1.02:497,1,0	1/1:7,15:22:36.12:588,36,0	1/1:6,16:22:51.15:779,51,0	1/1:6,11:17:32.95:507,33,0	1/1:10,29:39:54.18:882,54,0	1/1:4,17:21:36.12:588,36,0	1/1:5,18:24:39.13:637,39,0	1/1:12,27:39:60.20:980,60,0	1/1:5,23:28:45.15:735,45,0	1/1:9,25:34:51.17:826,51,0	1/1:5,23:28:5.57:692,6,0	1/1:19,0:18:11.95:101,12,0	1/1:21,0:21:14.97:151,15,0	1/1:32,0:32:17.82:151,18,0	1/1:7,19:26:36.12:588,36,0	1/1:8,13:20:27.02:410,27,0	1/1:9,22:31:54.18:882,54,0	0/0:26,0:26:45.13:0,45,977	1/1:9,16:25:45.14:699,45,0	1/1:5,20:25:44.76:734,45,0	1/1:3,10:13:21.07:343,21,0
chr10	10772790	.	CCATCCATCTATCCATCCATGCATGCATCACCCATCCAT	C	3429.28	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=-1.002;DP=663;FS=1.131;HRun=0;HaplotypeScore=507.5149;InbreedingCoeff=0.5921;MQ=61.39;MQ0=9;MQRankSum=-2.739;QD=23.65;ReadPosRankSum=-3.848;VQSLOD=-0.0985;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:20:3.01:69,3,0	0/0:12,0:12:9.18:0,9,2546	0/0:41,0:19:33.25:0,33,2187	0/0:39,0:30:75.71:0,76,3711	0/0:23,0:23:66.23:0,66,7545	0/0:15,0:15:24.08:0,24,3315	0/0:18,0:17:25.37:0,25,2375	0/1:24,0:23:99:972,0,100	0/0:19,0:19:39.13:0,39,3692	0/1:21,0:21:42.18:42,0,4237	0/0:15,0:15:21.14:0,21,4072	0/0:37,0:37:73.49:0,73,7130	0/0:21,0:21:48.16:0,48,5192	0/0:24,0:24:54.19:0,54,5407	0/0:33,0:33:67.94:0,68,6892	0/0:27,0:27:54.19:0,54,5063	0/0:32,0:32:44.16:0,44,6900	0/0:33,0:33:75.20:0,75,7251	1/1:1,12:12:36.05:1106,36,0	1/1:0,19:19:14.98:937,15,0	1/1:27,0:26:17.89:275,18,0	0/0:24,0:24:41.63:0,42,3916	0/0:18,0:17:13.35:0,13,3165	0/0:30,0:30:78.26:0,78,9387	0/0:19,0:19:51.15:0,51,5773	0/1:21,0:21:28.49:28,0,4315	0/0:28,0:28:67.17:0,67,7524	0/0:10,0:10:21.07:0,21,2379
chr10	10772817	.	T	TC	805.60	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=8.782;DP=674;FS=2.546;HRun=1;HaplotypeScore=141.1862;InbreedingCoeff=0.9316;MQ=68.56;MQ0=1;MQRankSum=-7.705;QD=15.20;ReadPosRankSum=-3.336;VQSLOD=2.5656;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,8:10:15.52:205,16,0	0/0:16,0:16:42.11:0,42,545	0/0:35,0:32:93.19:0,93,1137	0/0:37,0:36:90.26:0,90,1191	0/0:27,0:27:78.25:0,78,1006	0/0:16,0:16:36.10:0,36,452	0/0:32,0:31:72.22:0,72,919	1/1:5,7:12:30.99:432,31,0	0/0:15,0:15:42.12:0,42,528	0/0:24,0:24:66.21:0,66,843	0/0:19,0:19:54.14:0,54,700	0/0:33,0:33:87.27:0,87,1113	0/0:34,0:34:99:0,102,1321	0/0:22,0:22:63.19:0,63,804	0/0:32,0:32:87.28:0,87,1129	0/0:32,0:32:87.27:0,87,1114	0/0:32,0:32:87.28:0,87,1129	0/0:30,0:31:56.82:0,57,1037	1/1:12,0:12:4.73:125,5,0	0/0:19,0:19:6.66:0,7,21	1/1:6,13:18:21.18:195,21,0	0/0:18,0:18:54.17:0,54,695	0/0:21,0:21:54.18:0,54,701	0/0:31,0:31:90.29:0,90,1167	0/0:21,0:21:63.20:0,63,817	0/0:28,0:28:81.26:0,81,1051	0/0:27,0:27:72.23:0,72,932	0/0:18,0:18:54.18:0,54,700
chr10	10772828	.	T	TC	1762.47	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=4.727;DP=689;FS=0.564;HRun=1;HaplotypeScore=129.3963;InbreedingCoeff=0.9600;MQ=73.40;MQ0=1;MQRankSum=-6.412;QD=27.54;ReadPosRankSum=-2.664;VQSLOD=2.7857;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,14:14:33.11:480,33,0	0/0:15,0:15:42.11:0,42,543	0/0:31,0:31:80.67:0,81,979	0/0:34,0:33:84.23:0,84,1038	0/0:26,0:26:78.25:0,78,1013	0/0:19,0:19:45.15:0,45,584	0/0:33,0:32:81.26:0,81,1051	1/1:0,15:15:45.14:647,45,0	0/0:15,0:15:45.13:0,45,569	0/0:21,0:21:63.20:0,63,818	0/0:22,0:22:63.16:0,63,817	0/0:29,0:29:72.23:0,72,935	0/0:33,0:33:96.30:0,96,1231	0/0:22,0:22:63.20:0,63,812	0/0:34,0:34:93.29:0,93,1193	0/0:28,0:28:78.25:0,78,1013	0/0:32,0:32:90.29:0,90,1168	0/0:30,0:30:50.32:0,50,998	1/1:13,0:13:16.69:237,17,0	0/0:19,0:19:3.74:0,4,8	1/1:0,22:22:38.77:557,39,0	0/0:21,0:21:63.19:0,63,803	0/0:20,0:20:60.18:0,60,764	0/0:33,0:33:99:0,99,1255	0/0:27,0:27:81.26:0,81,1050	0/0:33,0:33:96.31:0,96,1247	0/0:29,0:29:81.14:0,81,1031	0/0:19,0:19:54.18:0,54,701
chr10	10776161	.	A	ATCCAGTCT	38828.52	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=-11.720;DP=724;FS=1.983;HRun=0;HaplotypeScore=194.8761;InbreedingCoeff=0.9951;MQ=77.67;MQ0=0;MQRankSum=-21.398;QD=106.09;ReadPosRankSum=4.783;VQSLOD=5.4750;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,132,3911	1/1:1,11:12:36.12:1659,36,0	0/0:28,0:28:79.48:0,79,2136	0/0:32,0:30:85.14:0,85,1926	0/0:23,0:23:66.20:0,66,1927	0/0:31,0:31:93.30:0,93,2678	0/0:36,0:36:99:0,102,2842	0/0:29,0:29:84.26:0,84,2206	0/0:26,0:26:78.25:0,78,2250	1/1:14,17:33:96.33:3855,96,0	1/1:7,9:18:33.11:1494,33,0	1/1:3,28:33:87.10:3751,87,0	1/1:5,24:33:84.29:3767,84,0	1/1:4,27:34:84.29:3653,84,0	1/1:6,30:38:99:4505,99,0	1/1:4,19:28:63.21:2703,63,0	1/1:2,20:23:54.19:2486,54,0	1/1:6,8:16:30.10:1327,30,0	0/0:24,0:24:69.24:0,69,2053	0/0:16,0:16:48.16:0,48,1454	0/0:36,0:36:99:0,108,3202	1/1:5,10:16:27.09:1106,27,0	1/1:5,10:15:30.10:1343,30,0	1/1:5,12:20:24.08:1100,24,0	0/0:31,0:31:90.31:0,90,2683	1/1:2,22:24:72.25:3232,72,0	1/1:3,15:19:51.18:2351,51,0	1/1:1,3:4:12.04:497,12,0
chr10	10776690	.	CAT	C	3877.67	PASS	AB=1.000;AC=41;AF=0.732;AN=56;BaseQRankSum=5.138;DP=515;FS=2.229;HRun=0;HaplotypeScore=84.3628;InbreedingCoeff=0.8107;MQ=46.48;MQ0=65;MQRankSum=0.413;QD=10.23;ReadPosRankSum=0.627;VQSLOD=3.4694;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:22:10.71:0,11,219	1/1:5,0:4:8.36:57,8,0	0/0:17,0:5:12.87:0,13,113	0/0:21,0:9:17.01:0,17,165	1/1:18,0:13:35.68:269,36,0	1/1:19,0:15:32.78:268,33,0	1/1:33,0:27:34.21:316,34,0	0/0:23,0:19:43.29:0,43,324	1/1:22,0:20:44.85:362,45,0	1/1:4,13:14:13.67:90,14,0	1/1:11,0:11:20.64:136,21,0	1/1:7,0:5:11.87:84,12,0	1/1:22,0:20:35.48:242,35,0	1/1:10,0:8:20.78:148,21,0	1/1:22,0:19:44.47:312,44,0	1/1:22,0:22:44.37:303,44,0	1/1:19,0:12:5.98:47,6,0	1/1:16,0:12:29.27:190,29,0	0/0:21,0:17:47.29:0,47,430	0/0:14,0:13:24.31:0,24,184	0/1:47,0:39:33.58:34,0,480	1/1:12,0:12:19.47:115,19,0	0/0:4,11:11:0.47:0,0,1	1/1:25,0:22:11.97:96,12,0	1/1:11,0:11:29.91:241,30,0	1/1:2,12:12:29.73:212,30,0	1/1:19,0:17:38.41:251,38,0	1/1:8,0:6:14.86:104,15,0
chr10	10778781	.	AGGGCTTCT	A	1504.82	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.305;DP=671;FS=0.000;HRun=0;HaplotypeScore=181.4678;InbreedingCoeff=0.9985;MQ=80.42;MQ0=0;MQRankSum=-7.216;QD=51.89;ReadPosRankSum=1.671;VQSLOD=3.5885;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,29:29:54.19:1600,54,0	0/0:14,0:14:42.14:0,42,1917	0/0:22,0:22:66.23:0,66,2678	0/0:22,0:24:64.44:0,64,2223	0/0:17,0:17:51.18:0,51,2249	0/0:21,0:21:63.20:0,63,2783	0/0:25,0:25:75.26:0,75,3374	0/0:24,0:24:72.25:0,72,3034	0/0:20,0:20:57.20:0,57,2439	0/0:26,0:26:75.26:0,75,3135	0/0:25,0:25:75.26:0,75,3438	0/0:32,0:32:96.33:0,96,4142	0/0:17,0:17:48.15:0,48,1908	0/0:18,0:18:54.19:0,54,2483	0/0:27,0:27:81.25:0,81,3303	0/0:26,0:26:78.27:0,78,3527	0/0:39,0:39:99:0,117,5374	0/0:36,0:36:99:0,108,4691	0/0:22,0:22:63.22:0,63,2528	0/0:12,0:12:36.11:0,36,1510	0/0:54,0:54:99:0,160,6746	0/0:17,0:17:51.18:0,51,2269	0/0:14,0:14:42.12:0,42,1792	0/0:36,0:36:99:0,108,4663	0/0:12,0:12:33.11:0,33,1390	0/0:34,0:34:99:0,102,4382	0/0:19,0:19:57.20:0,57,2505	0/0:9,0:9:27.09:0,27,1148
chr10	10783005	.	A	AAAAT	1752.60	PASS	AC=10;AF=0.192;AN=52;BaseQRankSum=2.157;DP=352;FS=10.436;HRun=0;HaplotypeScore=61.1242;InbreedingCoeff=0.6584;MQ=56.07;MQ0=12;MQRankSum=-5.315;QD=25.40;ReadPosRankSum=-3.184;VQSLOD=1.1216;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,15:19:36.12:877,36,0	0/0:8,0:7:15.05:0,15,246	0/0:12,0:4:0.96:0,1,45	0/0:7,0:5:2.97:0,3,20	0/0:18,0:18:24.07:0,24,360	0/0:20,0:20:30.08:0,30,435	0/0:11,0:9:24.06:0,24,338	1/1:27,0:21:36.11:540,36,0	0/0:9,0:8:9.03:0,9,147	0/0:12,0:12:21.07:0,21,344	0/0:20,0:20:18.06:0,18,295	0/0:5,0:5:3.01:0,3,49	0/0:9,0:9:6.01:0,6,74	0/0:3,0:3:3.01:0,3,49	0/0:14,0:14:21.07:0,21,328	0/0:5,0:5:3:0,3,25	0/0:33,0:33:72.25:0,72,1165	0/0:28,0:28:11.31:0,11,931	1/1:9,0:9:20.99:365,21,0	1/1:8,0:8:3.01:33,3,0	1/1:2,0:3:6.02:89,6,0	./.	./.	0/0:6,0:6:12.04:0,12,188	0/0:9,0:9:6.02:0,6,98	0/0:20,0:20:33.11:0,33,541	0/0:10,0:10:9:0,9,102	0/0:14,0:14:15.02:0,15,186
chr10	10783026	.	A	AAAT	741.82	PASS	AB=0.973;AC=7;AF=0.125;AN=56;BaseQRankSum=4.250;DP=350;FS=8.519;HRun=0;HaplotypeScore=63.9200;InbreedingCoeff=0.0582;MQ=63.89;MQ0=5;MQRankSum=-3.386;QD=8.15;ReadPosRankSum=1.007;VQSLOD=1.6598;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:22:99:319,0,152	0/0:8,0:8:24.08:0,24,381	0/0:14,0:7:10.51:0,11,131	0/1:17,0:12:26.89:27,0,91	0/0:15,0:15:39.06:0,39,582	0/0:18,0:18:42.14:0,42,634	0/0:17,0:16:45.11:0,45,668	0/1:22,4:25:99:367,0,480	0/0:5,0:4:9.03:0,9,153	0/0:18,0:18:48.16:0,48,732	0/0:8,0:8:24.07:0,24,373	0/0:8,0:8:12.03:0,12,160	0/0:6,0:6:15.05:0,15,227	0/0:5,0:5:12.04:0,12,176	0/0:12,0:12:30.10:0,30,472	0/0:4,0:4:9.03:0,9,134	0/0:35,0:35:99:0,99,1580	0/0:30,0:29:84.29:0,84,1355	0/1:18,0:17:63.39:63,0,463	1/1:4,0:4:3.01:69,3,0	0/1:4,0:4:23.05:23,0,89	0/0:3,0:3:9.03:0,9,125	0/0:4,0:4:12.04:0,12,166	0/0:5,0:5:15.05:0,15,235	0/0:6,0:6:18.06:0,18,269	0/0:14,0:14:36.59:0,37,606	0/0:11,0:11:27.09:0,27,382	0/0:13,0:13:33.11:0,33,494
chr10	10783038	.	T	TA	518.79	PASS	AB=0.925;AC=8;AF=0.143;AN=56;BaseQRankSum=-2.666;DP=369;FS=9.117;HRun=12;HaplotypeScore=53.8086;InbreedingCoeff=0.5626;MQ=63.39;MQ0=3;MQRankSum=0.803;QD=7.52;ReadPosRankSum=0.839;VQSLOD=1.4184;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:21:40.71:0,41,287	0/0:11,0:11:32.75:0,33,234	0/0:12,0:6:5.40:0,5,38	0/0:15,0:11:5.21:0,5,45	0/0:13,0:14:25.86:0,26,179	1/1:5,9:14:18.03:175,18,0	1/1:2,15:16:39.06:379,39,0	0/1:24,1:25:5.46:5,0,126	1/1:2,3:5:9.01:88,9,0	0/0:19,0:19:32.74:0,33,240	0/1:7,1:8:14.26:14,0,73	0/0:9,0:10:18.97:0,19,121	0/0:7,0:7:20.86:0,21,151	0/0:5,0:5:11.92:0,12,88	0/0:12,0:12:4.87:0,5,134	0/0:5,0:6:13.94:0,14,91	0/0:37,0:37:89.36:0,89,653	0/0:34,0:33:77.37:0,77,559	0/0:21,1:21:6.56:0,7,211	0/0:4,0:5:10.99:0,11,72	0/0:10,0:10:14.83:0,15,109	0/0:3,0:3:5.96:0,6,44	0/0:5,0:5:11.92:0,12,88	0/0:6,0:6:11.90:0,12,88	0/0:7,0:7:17.89:0,18,131	0/0:14,0:14:26.80:0,27,194	0/0:12,0:12:32.81:0,33,241	0/0:12,0:12:26.78:0,27,197
chr10	10783173	.	TTCCTGCCCTGCTTGAGC	T	2929.31	PASS	AB=0.950;AC=7;AF=0.125;AN=56;BaseQRankSum=7.777;DP=557;FS=0.826;HRun=0;HaplotypeScore=235.1045;InbreedingCoeff=0.7979;MQ=60.76;MQ0=2;MQRankSum=-7.889;QD=45.07;ReadPosRankSum=2.075;VQSLOD=2.9785;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,114,8212	0/0:5,0:5:12.04:0,12,754	0/0:20,0:14:42.14:0,42,2561	0/0:14,0:13:36.04:0,36,1367	0/0:13,0:13:33.11:0,33,2269	1/1:1,14:15:24.08:1068,24,0	1/1:4,15:19:21.07:993,21,0	0/0:23,0:22:54.17:0,54,2951	1/1:0,12:12:21.07:956,21,0	0/0:9,0:8:27.09:0,27,1850	0/0:7,0:7:18.05:0,18,1080	0/0:22,0:22:63.22:0,63,4576	0/0:23,0:23:66.22:0,66,4634	0/0:16,0:16:48.16:0,48,3322	0/0:20,0:20:54.19:0,54,3606	0/1:18,1:19:60.42:60,0,3290	0/0:33,0:33:93.29:0,93,6908	0/0:33,0:33:90.31:0,90,6193	0/0:30,0:29:72.25:0,72,4995	0/0:5,0:5:15.05:0,15,1102	0/0:78,0:77:99:0,205,14679	0/0:9,0:9:24.04:0,24,1388	0/0:5,0:5:15.05:0,15,830	0/0:39,0:39:99:0,114,7674	0/0:11,0:10:30.10:0,30,1931	0/0:12,0:12:33.11:0,33,2389	0/0:22,0:22:66.20:0,66,4049	0/0:3,0:3:9.03:0,9,635
chr10	10785193	.	GA	G	6093.34	PASS	AB=0.603;AC=40;AF=0.714;AN=56;BaseQRankSum=2.155;DP=622;FS=0.000;HRun=13;HaplotypeScore=92.0761;InbreedingCoeff=0.3698;MQ=52.06;MQ0=17;MQRankSum=2.278;QD=11.56;ReadPosRankSum=2.395;VQSLOD=4.6876;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,0:42:53.99:159,54,0	1/1:1,4:5:11.92:88,12,0	0/0:25,0:3:4.05:0,4,13	0/0:17,1:6:2.95:0,3,48	1/1:3,18:21:30.39:292,30,0	0/0:1,0:11:17.04:0,17,85	0/0:9,0:18:27.25:0,27,153	1/1:5,14:21:25.36:167,25,0	0/0:7,0:23:42.80:0,43,231	1/1:2,20:22:56.64:415,57,0	1/1:5,8:13:27.31:177,27,0	0/1:8,18:24:9.77:251,0,10	1/1:8,13:21:22.47:298,22,0	0/1:3,15:21:29.23:231,0,29	1/1:11,16:30:37.13:376,37,0	1/1:7,19:25:2.72:355,3,0	1/1:9,29:38:16.29:445,16,0	1/1:7,23:30:59.65:438,60,0	1/1:10,12:21:19.75:274,20,0	1/1:5,15:20:35.76:262,36,0	0/1:7,9:15:20.99:65,0,21	1/1:3,10:12:8.30:175,8,0	1/1:5,18:23:29.13:309,29,0	1/1:9,23:32:33.46:407,33,0	1/1:5,10:14:7.87:211,8,0	0/1:7,19:28:13.36:354,0,13	0/1:11,19:31:44.20:312,0,44	0/1:2,2:3:12.66:34,0,13
chr10	10785436	.	TACA	T	14596.50	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=12.432;DP=726;FS=6.682;HRun=0;HaplotypeScore=173.7829;InbreedingCoeff=0.9893;MQ=62.95;MQ0=1;MQRankSum=0.098;QD=30.66;ReadPosRankSum=8.150;VQSLOD=3.7414;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:31:67.78:0,68,1475	1/1:1,13:14:24.04:376,24,0	0/0:19,0:10:27.07:0,27,447	0/0:14,0:10:24:0,24,388	0/0:29,0:29:25.02:0,25,132	1/1:2,31:33:54.18:895,54,0	1/1:6,13:19:30.97:381,31,0	0/0:32,0:32:90.30:0,90,1701	1/1:0,32:32:48.16:799,48,0	1/1:2,20:22:66.13:991,66,0	1/1:4,19:23:30.06:447,30,0	1/1:2,25:27:48.16:775,48,0	1/1:3,17:20:45.13:718,45,0	1/1:1,26:27:48.16:799,48,0	1/1:2,29:31:66.23:1092,66,0	1/1:2,37:39:84.27:1359,84,0	1/1:5,29:34:54.16:844,54,0	1/1:2,18:20:39.12:619,39,0	0/0:26,0:26:75.26:0,75,1503	0/0:33,0:33:86.64:0,87,2009	0/0:38,0:38:99:0,111,2352	1/1:0,12:12:24.08:400,24,0	1/1:0,26:26:44.74:749,45,0	1/1:2,20:22:41.83:673,42,0	0/0:28,0:28:31.43:0,31,191	1/1:1,36:36:99:1648,102,0	1/1:2,31:33:53.93:881,54,0	1/1:0,5:5:9.03:150,9,0
chr10	10785439	.	A	ATACAT	3191.12	PASS	AB=0.954;AC=21;AF=0.375;AN=56;BaseQRankSum=-4.818;DP=722;FS=0.000;HRun=0;HaplotypeScore=232.2316;InbreedingCoeff=-0.1603;MQ=62.98;MQ0=1;MQRankSum=-3.385;QD=6.92;ReadPosRankSum=-9.144;VQSLOD=-0.0266;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:32:71.04:0,71,1453	0/1:14,0:15:28.28:28,0,41	0/0:18,0:10:27.05:0,27,418	0/0:13,0:10:24.54:0,25,351	1/1:1,25:29:4.62:109,5,0	0/1:32,0:33:79.85:86,0,80	1/1:13,0:18:13.68:428,14,0	0/0:32,0:32:93.31:0,93,1625	0/1:32,0:32:59.67:60,0,64	0/1:20,0:22:21.97:428,0,22	0/1:19,0:21:28.89:90,0,29	0/1:25,0:27:48.68:134,0,49	0/1:17,0:19:66.40:134,0,66	0/0:26,0:26:14.69:0,15,106	0/1:29,0:30:48.28:48,0,83	0/1:37,0:38:82.84:83,0,122	0/1:29,0:32:56.04:171,0,56	0/1:18,0:19:26.52:99,0,27	0/0:29,0:29:81.27:0,81,1523	0/0:33,0:33:96.33:0,96,2036	0/0:38,0:38:99:0,111,2301	0/0:12,0:12:2.67:0,3,44	0/0:28,0:28:19.11:0,19,100	0/1:20,0:21:14.74:15,0,69	1/1:0,28:30:15.05:498,15,0	0/1:38,0:37:5.45:732,0,5	0/1:31,0:32:85.69:178,0,86	0/1:5,0:5:8.52:42,0,9
chr10	10786073	.	TACACATACACACACACAC	T	1376.83	PASS	AB=1.000;AC=6;AF=0.107;AN=56;BaseQRankSum=-0.629;DP=523;FS=13.450;HRun=0;HaplotypeScore=216.6908;InbreedingCoeff=0.3405;MQ=72.62;MQ0=7;MQRankSum=-4.997;QD=11.38;ReadPosRankSum=-0.651;VQSLOD=1.3653;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,39:43:30.10:1156,30,0	0/0:10,0:10:22.97:0,23,1324	0/0:29,0:17:42.03:0,42,427	0/0:33,0:23:57.62:0,58,1235	0/0:18,0:18:26.07:0,26,657	0/0:20,0:20:27.55:0,28,1387	0/0:24,0:24:44.75:0,45,1236	0/1:16,0:16:94.58:95,0,938	0/0:15,0:15:27:0,27,598	0/0:15,0:15:45.11:0,45,2085	0/0:8,0:8:12.03:0,12,410	0/0:19,0:19:48.13:0,48,2570	0/0:11,0:11:13.07:0,13,1089	0/0:12,0:12:33.52:0,34,1172	0/0:24,0:24:59.87:0,60,2897	0/0:23,0:23:48.10:0,48,1990	0/0:26,0:26:74.99:0,75,2686	0/0:3,0:3:5.99:0,6,224	0/1:12,0:12:99:124,0,680	0/1:7,0:15:0.94:20,0,1	0/1:18,0:35:99:113,0,789	0/0:10,0:10:15.02:0,15,646	0/0:16,0:16:27.05:0,27,1053	0/0:31,0:31:69.15:0,69,3115	0/0:28,0:28:60.06:0,60,1697	0/0:11,0:11:27.09:0,27,1707	0/0:12,0:12:33.08:0,33,1751	0/0:4,0:4:12.01:0,12,412
chr10	10786077	.	CAT	C	1190.52	PASS	AB=0.986;AC=21;AF=0.375;AN=56;BaseQRankSum=6.432;DP=550;FS=19.942;HRun=0;HaplotypeScore=97.9655;InbreedingCoeff=-0.0783;MQ=68.65;MQ0=7;MQRankSum=-2.352;QD=3.42;ReadPosRankSum=-1.016;VQSLOD=0.7573;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:43,0:43:18.55:107,19,0	0/1:10,1:11:92.79:93,0,99	0/0:26,0:14:42.02:0,42,398	0/0:32,0:22:56.57:0,57,521	0/0:18,0:18:27.23:0,27,193	0/1:18,0:18:16.94:17,0,85	0/0:26,0:25:35.25:0,35,317	1/1:16,0:16:33.31:255,33,0	0/0:14,0:14:23.93:0,24,211	0/0:18,0:18:15.01:0,15,229	0/1:9,0:9:13.06:13,0,47	0/1:20,0:20:36.65:37,0,188	0/1:15,0:15:89.09:89,0,97	0/1:17,0:17:91.34:91,0,111	0/1:25,0:25:22.04:22,0,255	0/0:22,0:22:6.72:0,7,259	0/1:30,1:31:22.20:22,0,322	0/1:4,0:4:17.13:24,0,17	0/1:12,0:12:3.20:154,0,3	0/1:14,0:14:0.94:20,0,1	1/1:39,0:39:26.70:221,27,0	0/1:12,0:12:2.32:2,0,61	0/0:15,0:15:17.88:0,18,177	0/1:35,1:36:99:103,0,195	0/0:27,0:27:50.88:0,51,445	0/1:12,0:12:27.89:28,0,104	0/1:13,1:14:63.07:63,0,101	0/0:4,0:4:1.99:0,2,49
chr10	10786079	.	TAC	T	2118.92	PASS	AB=0.708;AC=29;AF=0.537;AN=54;BaseQRankSum=-3.534;DP=559;FS=11.663;HRun=0;HaplotypeScore=97.5863;InbreedingCoeff=0.4524;MQ=65.34;MQ0=7;MQRankSum=2.104;QD=6.73;ReadPosRankSum=4.338;VQSLOD=2.4323;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:43,0:43:6.20:43,6,0	0/1:8,4:12:51.52:117,0,52	./.	0/0:32,0:20:0:0,0,0	0/0:8,0:17:7.07:0,7,38	0/0:18,0:18:13.25:0,13,95	0/0:26,0:25:14.93:0,15,115	0/0:16,0:16:16.10:0,16,91	0/0:17,0:17:6:0,6,62	1/1:15,2:20:20.49:206,20,0	1/1:8,1:9:5.69:64,6,0	1/1:10,9:19:18.89:181,19,0	1/1:16,3:19:8.47:153,8,0	1/1:15,1:18:22.14:154,22,0	0/1:12,11:25:15.21:230,0,15	1/1:12,8:20:12.03:132,12,0	0/1:17,11:31:10.11:209,0,10	0/1:4,1:5:16.33:29,0,16	0/0:14,0:14:9.02:0,9,104	0/0:14,0:14:2.04:0,2,6	0/0:40,0:40:11.98:0,12,98	1/1:5,8:13:6.43:67,6,0	1/1:7,4:12:5.85:47,6,0	1/1:17,15:36:38.44:352,38,0	0/0:23,0:24:14.93:0,15,161	0/1:5,9:14:6.82:113,0,7	1/1:7,7:14:15.03:156,15,0	1/1:3,1:5:5.59:47,6,0
chr10	10786451	.	C	CT	21750.60	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=-14.743;DP=759;FS=4.428;HRun=1;HaplotypeScore=70.4942;InbreedingCoeff=0.9999;MQ=81.40;MQ0=0;MQRankSum=-5.265;QD=40.43;ReadPosRankSum=4.962;VQSLOD=5.3334;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,135,1723	1/1:0,11:11:33.11:494,33,0	0/0:26,0:27:74.90:0,75,966	0/0:27,0:27:67.95:0,68,805	1/1:1,22:23:63.17:919,63,0	1/1:0,19:19:51.17:764,51,0	1/1:1,33:34:78.26:1169,78,0	0/0:34,0:34:93.29:0,93,1195	1/1:0,20:20:51.17:764,51,0	1/1:1,40:41:99:1729,120,0	1/1:0,21:21:60.20:897,60,0	1/1:1,30:31:81.27:1214,81,0	1/1:0,21:21:57.19:854,57,0	1/1:0,24:24:57.19:854,57,0	1/1:0,36:36:99:1484,99,0	1/1:0,39:39:99:1664,111,0	1/1:1,35:36:99:1483,99,0	1/1:1,13:14:36.12:539,36,0	0/0:28,0:28:84.27:0,84,1091	0/0:18,0:18:51.17:0,51,662	0/0:38,0:38:99:0,108,1401	1/1:1,17:18:48.12:693,48,0	1/1:1,14:15:39.13:584,39,0	1/1:0,36:36:99:1484,99,0	1/1:0,25:25:66.22:989,66,0	1/1:1,28:29:87.23:1256,87,0	1/1:0,31:31:87.29:1303,87,0	1/1:1,13:14:42.13:609,42,0
chr10	10787447	.	GCGCTTACCTAGGAAGCGCAAGGC	G	2656.52	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.146;DP=409;FS=3.526;HRun=0;HaplotypeScore=254.8477;InbreedingCoeff=0.8740;MQ=57.70;MQ0=7;MQRankSum=-6.176;QD=115.50;ReadPosRankSum=-1.777;VQSLOD=2.7114;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:22:60.21:0,60,5816	0/0:7,0:7:21.07:0,21,2297	0/0:6,0:3:5.93:0,6,61	0/0:3,0:3:6.02:0,6,231	1/1:6,12:18:36.12:2002,36,0	0/0:15,0:14:39.13:0,39,3759	0/0:11,0:10:27.09:0,27,2445	0/0:18,0:18:45.15:0,45,3642	0/0:14,0:14:42.14:0,42,4155	0/0:15,0:15:42.11:0,42,3932	0/0:16,0:16:45.12:0,45,4312	0/0:12,0:12:36.12:0,36,3768	0/0:19,0:19:51.16:0,51,5105	0/0:21,0:21:63.22:0,63,6054	0/0:17,0:17:51.18:0,51,5550	0/0:15,0:15:45.15:0,45,4475	0/0:28,0:25:66.23:0,66,6280	0/0:7,0:7:21.07:0,21,1555	0/0:12,0:11:33.11:0,33,2761	0/0:8,0:8:21.07:0,21,1591	0/0:18,0:17:46.87:0,47,4465	0/0:17,0:17:48.12:0,48,4248	0/0:14,0:14:17.18:0,17,1857	0/0:12,0:12:33.11:0,33,2496	1/1:1,4:5:12.04:771,12,0	0/0:23,0:23:63.22:0,63,5661	0/0:26,0:25:41.43:0,41,4394	0/0:9,0:9:27.09:0,27,2966
chr10	10787493	.	G	GGAA	5015.29	PASS	AB=0.986;AC=36;AF=0.643;AN=56;BaseQRankSum=-0.538;DP=494;FS=8.957;HRun=0;HaplotypeScore=146.1917;InbreedingCoeff=0.6242;MQ=49.78;MQ0=21;MQRankSum=1.190;QD=13.78;ReadPosRankSum=-4.390;VQSLOD=2.9542;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:39.76:0,40,315	1/1:6,0:6:17.83:132,18,0	1/1:7,0:1:1.55:4,2,0	0/0:10,0:7:5.71:0,6,66	0/0:16,0:15:29.30:0,29,180	0/1:18,0:17:38.45:140,0,38	0/1:11,0:7:15.74:16,0,47	0/0:19,0:21:19.18:0,19,283	0/1:16,0:17:75.56:76,0,129	0/1:18,0:18:6.09:249,0,6	1/1:19,0:19:28.84:224,29,0	1/1:18,0:17:42.57:382,43,0	1/1:22,0:22:57.72:485,58,0	1/1:17,0:17:46.69:408,47,0	1/1:21,0:21:49.01:383,49,0	1/1:18,0:17:14.28:373,14,0	1/1:29,0:26:65.34:517,65,0	1/1:12,0:11:29.97:324,30,0	0/0:11,0:17:36.76:0,37,366	0/0:9,0:8:10.69:0,11,75	0/0:11,0:10:22.88:0,23,213	1/1:20,0:20:47.69:351,48,0	1/1:4,0:19:9.16:51,9,0	1/1:9,0:9:6.36:52,6,0	0/0:16,0:15:8.77:0,9,121	1/1:6,10:23:39.94:353,40,0	1/1:13,12:30:26.99:194,27,0	1/1:27,0:22:40.18:304,40,0
chr10	10788769	.	C	CCACACCCACACA	11463.75	PASS	AB=0.917;AC=47;AF=0.839;AN=56;BaseQRankSum=-2.717;DP=664;FS=0.682;HRun=0;HaplotypeScore=216.9523;InbreedingCoeff=0.1879;MQ=46.34;MQ0=36;MQRankSum=-1.916;QD=20.33;ReadPosRankSum=2.680;VQSLOD=3.8293;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:37,0:30:22.83:724,0,23	1/1:9,0:7:14.84:210,15,0	0/0:43,0:9:1.38:0,1,85	0/0:56,0:19:31.84:0,32,316	1/1:14,0:14:9:78,9,0	0/1:17,0:18:37.60:164,0,38	1/1:17,0:18:22.04:365,22,0	1/1:43,0:39:92.07:1435,92,0	0/1:21,0:22:23.10:100,0,23	0/1:8,0:16:19.13:617,0,19	1/1:8,0:8:4.25:29,4,0	1/1:20,0:24:27.59:1184,28,0	1/1:14,0:14:30.27:473,30,0	1/1:27,0:29:44.87:1010,45,0	1/1:15,0:18:11.86:455,12,0	1/1:14,0:16:32.08:498,32,0	1/1:18,0:31:9.35:730,9,0	0/1:13,0:12:75.03:237,0,75	1/1:20,0:16:26.92:590,27,0	1/1:18,0:15:23.89:332,24,0	1/1:22,33:61:8.94:68,9,0	1/1:10,0:11:5.67:63,6,0	1/1:11,0:13:16.16:277,16,0	1/1:28,0:24:20.02:242,20,0	1/1:7,0:18:12.23:215,12,0	1/1:16,0:15:24.96:403,25,0	1/1:10,0:11:23.95:554,24,0	1/1:5,0:5:12.04:410,12,0
chr10	10788771	.	A	ACACC	6060.25	PASS	AB=1.000;AC=41;AF=0.732;AN=56;BaseQRankSum=-2.642;DP=639;FS=13.676;HRun=0;HaplotypeScore=177.7243;InbreedingCoeff=0.1705;MQ=45.30;MQ0=39;MQRankSum=-0.396;QD=12.39;ReadPosRankSum=2.055;VQSLOD=3.8280;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:31:27.27:0,27,192	1/1:10,0:7:12.74:113,13,0	0/1:43,0:7:1.75:2,0,104	0/0:54,0:18:30.87:0,31,354	1/1:13,0:12:9:78,9,0	1/1:8,11:18:32.66:561,33,0	1/1:16,2:16:41.93:505,42,0	0/1:42,0:38:80.78:542,0,81	1/1:7,14:21:26.77:491,27,0	0/1:17,0:14:29.82:295,0,30	1/1:10,0:8:4.25:29,4,0	0/1:27,0:23:2.22:463,0,2	1/1:15,0:12:21.47:230,21,0	1/1:30,0:28:41.61:475,42,0	1/1:18,0:18:5.12:294,5,0	1/1:17,0:16:26.27:302,26,0	0/1:33,0:28:21.47:317,0,21	0/1:13,0:12:57:85,0,57	0/1:22,0:17:70.15:70,0,94	0/1:19,0:16:36.04:128,0,36	0/0:56,0:49:8.30:0,8,97	1/1:10,0:10:6:75,6,0	1/1:12,0:12:15.74:179,16,0	1/1:32,0:24:6.01:173,6,0	1/1:16,0:16:4.21:69,4,0	0/1:16,0:14:3.33:198,0,3	1/1:11,0:11:17.89:238,18,0	1/1:5,0:5:12.03:148,12,0
chr10	10788773	.	ACACACACACAC	A	4354.59	PASS	AB=0.979;AC=26;AF=0.464;AN=56;BaseQRankSum=-3.127;DP=634;FS=22.361;HRun=0;HaplotypeScore=215.4701;InbreedingCoeff=-0.6175;MQ=44.54;MQ0=44;MQRankSum=0.386;QD=9.23;ReadPosRankSum=4.467;VQSLOD=1.9365;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:39,0:30:99:161,0,223	0/1:10,0:7:44.66:45,0,130	0/0:43,0:7:14.09:0,14,141	0/0:54,0:18:38.67:0,39,756	1/1:12,0:11:9:78,9,0	0/1:18,0:18:83.82:84,0,776	0/1:19,0:17:99:209,0,276	0/1:43,0:38:99:414,0,479	0/1:18,0:18:38.32:38,0,590	0/1:15,0:13:99:229,0,263	0/1:10,0:8:9.29:22,0,9	0/1:30,1:27:99:411,0,467	0/1:15,0:12:99:184,0,230	0/1:25,1:24:52.79:427,0,53	0/1:17,1:18:99:182,0,108	0/1:18,1:17:40.37:262,0,40	0/1:30,0:26:99:329,0,197	0/1:10,1:10:84.14:84,0,128	0/1:22,1:16:99:168,0,495	0/1:18,1:16:99:138,0,137	0/0:51,2:46:9.58:0,10,375	0/0:10,0:10:1.64:0,2,37	0/1:13,0:12:76.61:77,0,92	0/1:29,2:23:16.25:126,0,16	0/1:14,1:15:78.04:78,0,129	0/1:17,0:15:99:232,0,107	0/1:12,0:12:99:137,0,123	1/1:4,1:5:12.04:241,12,0
chr10	10788783	.	ACCC	A	2093.91	PASS	AB=0.925;AC=22;AF=0.407;AN=54;BaseQRankSum=-1.051;DP=652;FS=3.824;HRun=4;HaplotypeScore=190.8063;InbreedingCoeff=-0.5539;MQ=43.46;MQ0=54;MQRankSum=-4.074;QD=4.42;ReadPosRankSum=0.699;VQSLOD=-0.2676;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:29,5:28:99:396,0,125	0/0:11,1:12:20.68:0,21,147	0/1:46,3:9:23.98:24,0,158	0/0:51,1:11:22.03:0,22,349	./.	0/1:19,0:18:13.31:13,0,540	0/1:16,0:15:99:124,0,253	0/1:38,5:39:99:317,0,865	0/0:17,0:17:9.25:0,9,349	0/1:20,0:14:43.14:43,0,314	0/0:9,0:8:2.50:0,2,9	0/1:30,0:26:99:111,0,387	0/1:12,2:12:96.09:96,0,176	0/1:24,2:25:99:142,0,117	0/1:16,3:19:9.02:9,0,191	0/1:15,0:12:67.48:67,0,101	0/1:28,0:24:84.84:85,0,243	0/1:11,0:10:35.95:36,0,210	0/1:27,1:21:52.81:53,0,673	0/1:15,0:13:99:100,0,144	0/0:58,2:52:26.45:0,26,461	0/0:13,0:14:18.33:0,18,193	0/1:12,0:11:71.22:84,0,71	0/1:25,1:22:62.38:66,0,62	0/1:14,0:14:78.57:79,0,130	0/1:13,1:13:87.30:87,0,158	0/1:13,1:14:99:154,0,143	1/1:6,0:6:12.04:165,12,0
chr10	10788784	.	CCCCACACAT	C	4838.21	PASS	AB=0.970;AC=28;AF=0.519;AN=54;BaseQRankSum=-1.596;DP=643;FS=4.188;HRun=0;HaplotypeScore=209.4629;InbreedingCoeff=-0.7783;MQ=43.44;MQ0=52;MQRankSum=-2.157;QD=8.30;ReadPosRankSum=-1.592;VQSLOD=3.6179;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:28,1:27:71.33:637,0,71	0/1:13,0:12:56.32:56,0,75	0/1:49,0:9:24.71:25,0,190	0/0:52,0:11:21.28:0,21,470	./.	0/1:19,0:18:84.02:84,0,661	0/1:15,0:15:99:106,0,270	0/1:43,0:37:99:388,0,573	0/1:16,0:16:30.74:31,0,490	0/1:20,0:14:99:224,0,336	1/1:12,0:9:2.40:9,2,0	0/1:31,0:26:99:499,0,307	0/1:13,1:12:99:206,0,157	0/1:25,1:25:63.68:396,0,64	0/1:18,0:19:96.56:115,0,97	0/1:14,0:11:30.23:153,0,30	0/1:29,0:24:99:307,0,155	0/1:10,0:10:64.37:107,0,64	0/1:27,0:20:99:118,0,581	0/1:16,0:13:65.85:66,0,121	0/1:58,0:50:1.96:2,0,409	0/1:15,0:15:37.02:37,0,89	0/1:8,6:13:75.24:160,0,75	0/1:29,0:22:44.97:88,0,45	0/1:13,0:13:70.92:163,0,71	0/1:11,2:12:99:252,0,106	0/1:12,2:14:99:272,0,116	1/1:1,5:6:12.04:336,12,0
chr10	10788791	.	CAT	C	468.40	PASS	AB=0.960;AC=18;AF=0.333;AN=54;BaseQRankSum=2.629;DP=638;FS=7.357;HRun=0;HaplotypeScore=195.4716;InbreedingCoeff=-0.3323;MQ=42.36;MQ0=47;MQRankSum=-2.799;QD=1.27;ReadPosRankSum=-3.490;VQSLOD=1.1457;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:27,4:25:89.84:90,0,128	0/0:14,0:12:23.94:0,24,204	0/0:43,0:9:7.88:0,8,120	0/0:46,0:8:6.48:0,6,193	./.	0/0:18,0:17:38.22:0,38,352	0/0:15,0:13:17.92:0,18,179	0/1:44,0:37:26.89:27,0,612	0/0:15,0:15:26.76:0,27,250	0/1:21,0:14:3.57:4,0,285	0/0:9,1:8:2.88:0,3,19	0/1:31,1:27:35.95:36,0,327	0/1:13,0:10:3.13:3,0,90	0/1:31,1:29:26.29:26,0,247	0/0:18,1:18:18.97:0,19,179	0/1:13,1:11:20.35:20,0,111	0/1:28,0:25:44.83:45,0,167	0/1:10,1:10:56.05:56,0,147	0/1:31,2:23:6.52:7,0,434	0/1:14,1:11:21.06:21,0,72	0/0:64,2:57:19.76:0,20,218	0/0:13,0:13:26.33:0,26,227	0/1:16,0:15:34.01:34,0,44	0/1:30,2:25:18.13:38,0,18	0/1:11,2:13:32.71:33,0,95	0/1:15,0:14:41.64:42,0,61	0/1:12,0:12:47.47:47,0,119	1/1:5,1:6:11.93:95,12,0
chr10	10788793	.	T	TAC	9173.04	PASS	AB=0.854;AC=47;AF=0.870;AN=54;BaseQRankSum=-3.872;DP=642;FS=2.868;HRun=0;HaplotypeScore=174.2022;InbreedingCoeff=0.1719;MQ=41.48;MQ0=40;MQRankSum=1.372;QD=15.63;ReadPosRankSum=1.378;VQSLOD=4.9468;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:22,7:24:25.61:409,26,0	1/1:1,10:11:24.08:397,24,0	0/0:44,0:8:11.23:0,11,89	0/1:45,0:9:8.82:9,0,46	./.	1/1:12,6:17:33.11:519,33,0	1/1:10,6:14:26.20:349,26,0	1/1:21,23:38:57.07:860,57,0	1/1:11,5:16:30.04:407,30,0	0/1:12,8:13:30.49:367,0,30	1/1:8,4:10:2.98:50,3,0	1/1:15,17:27:34.96:705,35,0	1/1:9,4:11:17.99:246,18,0	1/1:21,13:32:47.17:690,47,0	1/1:9,9:18:7.89:287,8,0	1/1:7,7:11:27:355,27,0	1/1:15,9:21:30.12:506,30,0	1/1:9,3:11:16.59:169,17,0	0/1:20,11:23:34.66:509,0,35	1/1:5,8:10:9.01:151,9,0	1/1:55,15:62:46.25:662,46,0	1/1:4,10:14:27.09:450,27,0	1/1:10,6:15:11.67:190,12,0	1/1:29,5:27:16.97:251,17,0	1/1:8,5:13:18.19:250,18,0	0/1:11,3:13:10.90:127,0,11	1/1:7,6:13:12.27:231,12,0	0/1:6,0:6:1.60:27,0,2
chr10	10788796	.	ACACACAC	A	1196.42	PASS	AB=0.954;AC=13;AF=0.241;AN=54;BaseQRankSum=5.992;DP=651;FS=8.445;HRun=0;HaplotypeScore=219.6810;InbreedingCoeff=-0.2227;MQ=40.08;MQ0=42;MQRankSum=-4.965;QD=4.23;ReadPosRankSum=-0.900;VQSLOD=1.1296;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:24:99:107,0,353	0/0:11,0:11:24.91:0,25,461	0/0:47,0:7:15.03:0,15,371	0/0:46,0:8:1.54:0,2,199	./.	0/0:17,0:16:31.68:0,32,816	0/0:14,1:13:1.15:0,1,556	0/1:41,0:34:12.42:12,0,948	0/0:13,0:14:6.22:0,6,679	0/0:20,0:13:29.08:0,29,722	0/0:13,0:11:2.22:0,2,7	0/1:34,0:29:99:186,0,900	0/0:13,0:11:2.08:0,2,363	0/1:31,6:33:77.07:77,0,659	0/1:17,2:18:72.51:73,0,171	0/1:16,0:13:99:108,0,236	0/1:19,3:19:99:344,0,359	0/1:13,0:12:97.01:97,0,174	0/1:33,0:23:44.31:44,0,798	0/0:13,0:10:12.99:0,13,291	0/0:70,1:63:55.82:0,56,1298	0/0:13,0:14:28.62:0,29,575	0/0:14,0:14:10.53:0,11,117	0/0:31,5:30:3.08:0,3,303	0/1:14,0:14:79.67:80,0,216	0/1:14,3:16:99:131,0,186	0/0:13,0:13:8.25:0,8,363	1/1:6,0:6:8.10:83,8,0
chr10	10788891	.	CCCCACACATACA	C	291.07	PASS	AB=0.967;AC=11;AF=0.212;AN=52;BaseQRankSum=3.899;DP=401;FS=1.027;HRun=0;HaplotypeScore=112.2576;InbreedingCoeff=-0.1678;MQ=46.28;MQ0=64;MQRankSum=-2.351;QD=1.58;ReadPosRankSum=0.814;VQSLOD=2.1538;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:7:8.73:0,9,233	0/0:2,0:2:0.35:0,0,18	0/1:39,0:4:2.66:3,0,17	0/1:50,0:9:14.61:15,0,34	./.	0/0:4,0:4:5.87:0,6,40	0/0:19,0:10:17.53:0,18,336	0/0:8,0:6:18.04:0,18,347	0/1:13,0:12:18.15:18,0,193	0/1:20,0:11:4.52:5,0,254	0/0:5,0:3:3:0,3,29	0/0:11,0:6:4.52:0,5,30	0/0:7,0:6:10.66:0,11,97	0/0:14,0:9:3.01:0,3,71	0/0:8,0:6:5.69:0,6,59	0/1:8,0:5:45.74:46,0,166	0/1:5,1:4:17.46:53,0,17	0/1:8,0:6:21.03:31,0,21	0/0:19,0:11:33.07:0,33,856	0/0:13,0:12:15.45:0,15,277	0/0:62,0:55:99:0,113,3333	0/0:9,0:7:0.76:0,1,2	0/0:6,0:3:2.98:0,3,21	0/1:18,2:16:50.62:105,0,51	0/1:14,1:14:99:124,0,245	0/0:11,0:6:1.74:0,2,63	1/1:4,0:3:2.90:20,3,0	./.
chr10	10788900	.	TAC	T	153.98	PASS	AB=0.947;AC=6;AF=0.125;AN=48;BaseQRankSum=0.902;DP=380;FS=17.259;HRun=0;HaplotypeScore=67.0809;InbreedingCoeff=-0.0069;MQ=42.32;MQ0=70;MQRankSum=1.360;QD=1.52;ReadPosRankSum=1.241;VQSLOD=0.2258;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:8,2:6:14.87:15,0,45	0/0:2,0:2:5.61:0,6,61	0/0:39,0:2:3.01:0,3,31	0/0:53,0:5:1.82:0,2,5	./.	0/0:4,0:4:5.61:0,6,36	0/0:19,0:10:16.29:0,16,218	0/0:20,0:12:24.06:0,24,355	0/0:9,0:8:7.13:0,7,99	0/0:20,0:12:24.62:0,25,250	0/0:5,0:3:3.01:0,3,32	1/1:4,1:3:3.01:38,3,0	0/0:7,0:6:11.65:0,12,125	0/0:10,0:5:5.27:0,5,55	0/0:7,0:5:8.98:0,9,90	0/0:9,0:5:8.98:0,9,120	0/0:6,0:5:2.88:0,3,15	0/0:7,0:5:2.84:0,3,9	0/0:17,0:10:2.90:0,3,280	0/1:8,0:7:28.11:28,0,45	0/1:60,3:53:99:161,0,1065	0/0:7,0:4:2.16:0,2,6	./.	0/0:13,0:8:5.97:0,6,59	0/1:15,0:14:21.96:22,0,127	0/0:9,0:3:6.32:0,6,56	./.	./.
chr10	10788934	.	CCCACACAT	C	529.89	PASS	AB=0.946;AC=10;AF=0.185;AN=54;BaseQRankSum=3.433;DP=486;FS=32.825;HRun=0;HaplotypeScore=124.1912;InbreedingCoeff=-0.0874;MQ=36.90;MQ0=47;MQRankSum=-2.465;QD=4.86;ReadPosRankSum=-0.834;VQSLOD=0.7903;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:19:39.09:0,39,1376	0/1:3,0:3:18.92:19,0,47	0/0:39,0:3:8.98:0,9,221	0/0:39,0:4:6.01:0,6,250	./.	0/1:5,1:6:75.36:75,0,155	0/0:14,1:9:11.06:0,11,247	0/0:40,0:30:66.16:0,66,1977	0/1:8,1:7:99:153,0,165	0/1:23,1:17:99:157,0,396	1/1:4,0:4:2.37:8,2,0	0/1:20,2:21:99:181,0,352	0/1:9,0:10:2.28:2,0,232	0/0:14,1:14:26.29:0,26,405	0/0:13,0:12:20.08:0,20,355	0/0:6,0:4:7.57:0,8,148	0/0:8,0:7:9.61:0,10,160	0/0:14,0:11:35.32:0,35,569	0/0:15,0:10:27.06:0,27,886	0/0:6,0:4:6.02:0,6,188	0/0:94,0:85:99:0,181,7253	0/0:13,0:12:18.12:0,18,359	0/0:8,0:6:6.02:0,6,196	0/0:15,0:12:23.95:0,24,509	0/1:16,0:15:0.39:0,0,372	0/1:14,1:9:59.65:60,0,395	0/0:7,0:7:18.03:0,18,447	0/0:3,0:1:3.01:0,3,106
chr10	10788942	.	T	TAC	4140.29	PASS	AB=0.773;AC=32;AF=0.593;AN=54;BaseQRankSum=0.099;DP=491;FS=4.764;HRun=0;HaplotypeScore=99.4113;InbreedingCoeff=0.3423;MQ=38.76;MQ0=40;MQRankSum=-2.286;QD=16.50;ReadPosRankSum=-2.062;VQSLOD=3.0768;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:21:36.07:0,36,458	1/1:2,0:2:2.65:50,3,0	0/0:42,0:6:14.91:0,15,154	0/1:41,0:7:3.11:3,0,93	./.	1/1:4,3:7:1.28:141,1,0	0/0:13,1:9:4.76:0,5,37	0/0:38,0:29:51.08:0,51,609	0/1:5,3:6:4.51:91,0,5	0/1:22,0:16:44.07:354,0,44	1/1:3,0:3:3.01:38,3,0	1/1:7,15:21:24.14:399,24,0	1/1:5,3:8:11.07:157,11,0	0/1:9,7:15:7.74:363,0,8	1/1:4,8:11:15.52:251,16,0	0/1:4,2:4:7.41:45,0,7	0/1:7,4:11:2.66:109,0,3	1/1:9,8:14:36.29:504,36,0	0/0:18,0:13:30.06:0,30,357	0/0:6,0:5:5.77:0,6,70	0/0:94,0:87:99:0,179,2268	1/1:7,7:13:24.97:389,25,0	1/1:6,2:7:6.02:101,6,0	1/1:6,8:12:21.04:352,21,0	1/1:13,3:15:18.06:275,18,0	0/1:7,5:9:16.66:236,0,17	0/1:2,6:7:1.73:233,0,2	1/1:2,1:1:3.01:51,3,0
chr10	10788974	.	CCACA	C	45.95	PASS	AB=0.808;AC=4;AF=0.071;AN=56;BaseQRankSum=4.503;DP=515;FS=22.204;HRun=0;HaplotypeScore=138.6987;InbreedingCoeff=0.1557;MQ=44.40;MQ0=14;MQRankSum=-2.797;QD=1.58;ReadPosRankSum=-3.190;VQSLOD=0.0972;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:23:47.89:0,48,874	0/0:3,0:3:1.34:0,1,74	0/0:47,0:12:6.56:0,7,270	0/0:43,0:16:19.37:0,19,165	0/0:5,0:5:6.02:0,6,154	0/1:6,3:9:54.67:55,0,72	0/1:11,2:7:30.66:77,0,31	0/0:36,0:34:51.21:0,51,1269	1/1:5,2:6:2.80:13,3,0	0/0:17,0:15:12.04:0,12,549	0/0:8,0:8:14.19:0,14,296	0/0:23,0:22:29.33:0,29,647	0/0:8,0:8:18.02:0,18,353	0/0:16,0:16:30.20:0,30,606	0/0:11,0:10:17.90:0,18,279	0/0:5,0:4:8.92:0,9,115	0/0:20,0:19:31.77:0,32,812	0/0:17,0:16:47.75:0,48,1061	0/0:17,0:15:21:0,21,236	0/0:5,0:5:12.03:0,12,254	0/0:95,0:93:99:0,177,3578	0/0:15,0:13:26.98:0,27,493	0/0:13,0:13:26.93:0,27,483	0/0:21,0:21:24.18:0,24,535	0/0:12,0:12:0.09:0,0,331	0/0:11,0:10:21.07:0,21,502	0/0:9,0:9:18.02:0,18,401	0/0:5,0:4:9.03:0,9,222
chr10	10789013	.	CCA	C	869.28	PASS	AB=0.948;AC=29;AF=0.630;AN=46;BaseQRankSum=-5.360;DP=395;FS=18.101;HRun=0;HaplotypeScore=76.1261;InbreedingCoeff=-0.0260;MQ=41.48;MQ0=34;MQRankSum=2.773;QD=3.24;ReadPosRankSum=2.754;VQSLOD=0.5337;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:14:10.28:0,10,120	0/1:7,0:6:14.78:30,0,15	./.	0/0:32,0:7:6.01:0,6,62	./.	1/1:7,0:6:3:26,3,0	1/1:9,3:9:5.26:70,5,0	0/1:24,1:19:6.70:7,0,103	1/1:3,1:3:3:36,3,0	0/0:12,0:9:5.93:0,6,56	0/1:9,0:7:7.76:30,0,8	1/1:15,2:16:4.89:69,5,0	./.	1/1:13,1:10:8.82:91,9,0	./.	0/1:9,0:6:3.75:14,0,4	0/1:17,3:19:15.98:134,0,16	1/1:7,4:10:7.85:107,8,0	0/1:20,0:12:16.23:16,0,21	1/1:12,0:10:2.80:35,3,0	0/1:40,4:42:9.19:145,0,9	./.	1/1:11,1:11:2.71:21,3,0	0/1:14,3:15:14.22:15,0,14	1/1:5,3:8:8.94:76,9,0	0/1:11,0:9:19.15:19,0,92	0/0:8,0:7:3.44:0,3,21	1/1:4,0:4:6.02:69,6,0
chr10	10789729	.	TAC	T	302.25	PASS	AB=0.947;AC=19;AF=0.365;AN=52;BaseQRankSum=-2.383;DP=465;FS=7.970;HRun=0;HaplotypeScore=140.0295;InbreedingCoeff=0.0594;MQ=29.00;MQ0=43;MQRankSum=-1.145;QD=1.24;ReadPosRankSum=-0.246;VQSLOD=2.1507;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:18,1:15:14.98:27,0,15	0/1:7,1:7:32.07:32,0,35	./.	./.	0/1:17,0:17:0.12:0,0,1	0/1:11,0:10:7.06:7,0,7	0/0:15,0:15:2.99:0,3,24	0/0:22,0:16:10.27:0,10,50	0/1:15,0:11:9.20:15,0,9	0/1:25,1:24:40.15:40,0,136	0/1:10,2:11:0:0,0,0	0/0:17,0:15:3.95:0,4,82	0/0:15,0:16:12.78:0,13,125	1/1:11,0:11:2.23:9,2,0	1/1:10,0:8:5.32:42,5,0	1/1:4,4:9:9.77:83,10,0	0/0:9,9:18:5.34:0,5,23	0/1:13,1:14:11.18:44,0,11	0/0:27,0:20:12.93:0,13,67	0/0:10,0:7:2.49:0,2,9	0/0:39,0:30:7.29:0,7,36	0/0:19,0:15:6.75:0,7,57	0/0:15,0:15:6.02:0,6,75	0/0:21,0:19:10.84:0,11,124	0/1:39,0:36:0.50:1,0,12	0/1:34,2:30:45.75:129,0,46	0/1:6,0:6:5.74:8,0,6	1/1:6,0:2:0.47:1,0,0
chr10	10789754	.	A	ACCC	771.30	PASS	AB=0.987;AC=17;AF=0.304;AN=56;BaseQRankSum=11.220;DP=632;FS=128.225;HRun=1;HaplotypeScore=182.4651;InbreedingCoeff=-0.2102;MQ=37.37;MQ0=37;MQRankSum=-8.896;QD=2.04;ReadPosRankSum=0.526;VQSLOD=-0.4053;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:23:63.56:64,0,291	0/1:12,0:11:8.91:9,0,260	0/0:11,0:4:9.03:0,9,148	0/0:21,0:9:20.98:0,21,343	0/1:24,0:23:0.19:21,0,0	0/1:14,0:13:9.88:37,0,10	0/1:20,1:21:20.68:21,0,61	0/1:27,0:22:99:174,0,682	1/1:13,0:10:3.19:85,3,0	0/1:35,1:35:99:174,0,694	0/1:17,1:17:1.41:1,0,90	0/0:22,0:21:6.44:0,6,442	0/1:24,0:23:61.38:61,0,630	0/1:17,0:17:15.74:16,0,384	0/1:13,0:11:34.07:34,0,65	0/0:16,1:14:25.54:0,26,376	0/0:22,0:19:20.19:0,20,314	0/0:19,0:19:19.05:0,19,650	0/0:22,0:19:22.12:0,22,693	0/1:17,0:17:8.69:9,0,305	0/0:47,1:41:28.59:0,29,426	0/1:31,0:29:67.11:67,0,314	0/0:22,0:22:14.61:0,15,256	0/0:29,0:27:35.74:0,36,579	0/1:36,3:36:52.04:148,0,52	0/1:45,0:39:1.66:2,0,1152	0/0:12,0:12:9.36:0,9,304	0/0:8,0:4:12.04:0,12,204
chr10	10789766	.	ACACAC	A	724.84	PASS	AB=0.888;AC=7;AF=0.125;AN=56;BaseQRankSum=6.249;DP=672;FS=81.015;HRun=0;HaplotypeScore=195.4903;InbreedingCoeff=0.5217;MQ=44.39;MQ0=34;MQRankSum=-4.752;QD=6.09;ReadPosRankSum=-0.563;VQSLOD=-0.6882;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:26:46.06:0,46,512	0/0:12,0:11:16.28:0,16,173	0/0:19,0:8:23.11:0,23,285	0/0:31,0:17:45.14:0,45,586	1/1:22,7:26:8.91:115,9,0	1/1:12,5:14:5.11:257,5,0	0/1:21,1:21:33.75:206,0,34	0/0:25,0:21:11.22:0,11,559	0/1:9,3:9:0.04:109,0,0	0/0:40,0:39:84.63:0,85,1279	0/0:16,0:15:20.79:0,21,204	0/0:26,0:24:44.35:0,44,668	0/0:26,0:25:64.68:0,65,999	0/0:19,0:19:34.90:0,35,471	0/0:16,0:14:26.48:0,26,269	0/0:24,0:21:47.02:0,47,597	0/0:24,0:21:37.16:0,37,460	0/0:18,0:18:51.16:0,51,755	0/0:21,0:19:41.30:0,41,638	0/0:15,0:15:31.92:0,32,403	0/0:45,0:41:60.73:0,61,677	0/0:34,0:33:60.94:0,61,657	0/0:22,0:22:30.07:0,30,474	0/0:28,0:27:51.11:0,51,728	0/1:35,4:36:20.06:166,0,20	0/0:42,0:39:92.83:0,93,1178	0/0:13,0:13:29.83:0,30,355	0/0:6,0:3:9.03:0,9,124
chr10	10789770	.	AC	A	737.94	PASS	AB=0.815;AC=9;AF=0.161;AN=56;BaseQRankSum=7.557;DP=680;FS=104.948;HRun=2;HaplotypeScore=165.7179;InbreedingCoeff=0.3418;MQ=49.47;MQ0=31;MQRankSum=-5.585;QD=4.34;ReadPosRankSum=-1.471;VQSLOD=-0.3577;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:26:45.85:0,46,481	0/0:12,0:11:15.75:0,16,154	0/0:21,0:10:29.46:0,29,357	0/0:37,0:23:60.15:0,60,734	1/1:15,14:26:9.49:116,9,0	1/1:11,7:15:10.67:279,11,0	0/1:10,11:20:18.47:207,0,18	0/0:23,1:20:9.49:0,9,521	0/1:9,3:9:6.60:70,0,7	0/1:35,3:38:3.31:3,0,1019	0/0:13,2:14:20.68:0,21,199	0/0:26,1:25:47.08:0,47,571	0/0:25,0:24:62.30:0,62,792	0/0:17,2:19:35.60:0,36,447	0/0:15,0:13:28.59:0,29,267	0/0:21,1:20:49.56:0,50,565	0/0:22,1:21:39.55:0,40,495	0/0:20,0:20:53.60:0,54,638	0/0:22,0:20:20.19:0,20,603	0/0:14,3:17:5.61:0,6,444	0/0:48,1:43:63.70:0,64,735	0/0:32,1:32:41.19:0,41,586	0/0:23,0:23:36.08:0,36,460	0/0:27,0:26:50.38:0,50,601	0/1:31,8:37:23.01:193,0,23	0/0:44,0:41:86.37:0,86,1123	0/1:10,2:12:7.23:7,0,297	0/0:6,0:3:9.03:0,9,119
chr10	10789771	.	C	CA	833.78	PASS	AB=0.989;AC=11;AF=0.196;AN=56;BaseQRankSum=7.387;DP=661;FS=93.516;HRun=1;HaplotypeScore=161.1421;InbreedingCoeff=0.4027;MQ=50.09;MQ0=28;MQRankSum=-6.096;QD=4.71;ReadPosRankSum=-1.651;VQSLOD=-0.6164;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:26:46.52:0,47,497	0/0:12,0:11:16.36:0,16,181	0/0:21,0:10:29.46:0,29,359	0/0:37,0:23:59.92:0,60,738	1/1:30,0:27:9.93:117,10,0	1/1:17,1:15:12.07:297,12,0	0/1:17,0:16:13.06:208,0,13	0/0:23,0:19:15.12:0,15,527	1/1:10,0:8:8.35:102,8,0	0/1:38,0:38:40.01:40,0,1004	0/0:14,0:13:20.63:0,21,200	0/0:26,0:24:46.58:0,47,561	0/0:25,0:24:62.23:0,62,771	0/0:18,1:19:38.39:0,38,475	0/0:15,0:13:29.02:0,29,282	0/0:22,0:20:50.90:0,51,623	0/0:22,0:20:39.53:0,40,478	0/0:21,0:21:53.60:0,54,632	0/0:18,1:18:4.45:0,4,585	0/1:16,0:16:3.03:3,0,440	0/0:47,2:43:29.39:0,29,698	0/0:31,1:31:38.43:0,38,582	0/0:22,1:23:36.08:0,36,459	0/0:28,0:27:50.44:0,50,595	0/1:34,2:34:11.67:204,0,12	0/0:42,0:40:86.39:0,86,1128	0/1:12,0:12:15.43:15,0,298	0/0:5,0:3:9.03:0,9,120
chr10	10789772	.	CA	C	306.59	PASS	AB=0.947;AC=9;AF=0.161;AN=56;BaseQRankSum=8.937;DP=662;FS=128.685;HRun=1;HaplotypeScore=160.6665;InbreedingCoeff=0.8021;MQ=50.97;MQ0=27;MQRankSum=-6.370;QD=2.74;ReadPosRankSum=-1.754;VQSLOD=-0.7141;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:26:50.79:0,51,715	0/0:12,0:11:15.02:0,15,213	0/0:21,0:10:27.98:0,28,431	0/0:39,0:25:69.12:0,69,1005	1/1:30,0:27:7.71:39,8,0	1/1:18,0:15:17.91:138,18,0	0/1:17,1:17:13.36:94,0,13	0/0:23,0:19:40.35:0,40,712	1/1:10,0:8:6.88:35,7,0	0/0:37,1:38:43.19:0,43,1339	0/0:15,0:14:24.95:0,25,334	0/0:26,0:24:45.07:0,45,687	0/0:25,0:24:57.19:0,57,891	0/0:18,0:18:39.02:0,39,557	0/0:15,0:13:29.99:0,30,386	0/0:22,0:20:51.14:0,51,756	0/0:22,0:20:42.96:0,43,615	0/0:21,0:21:60.10:0,60,837	0/0:19,0:18:46.05:0,46,735	0/0:16,0:16:23.59:0,24,557	0/0:48,0:43:77.29:0,77,1078	0/0:32,0:31:49.59:0,50,883	0/0:22,1:23:36.12:0,36,552	0/0:27,0:26:47.90:0,48,719	1/1:34,2:34:30.97:155,31,0	0/0:42,0:40:99:0,104,1442	0/0:12,0:12:13.59:0,14,383	0/0:5,0:3:9.03:0,9,140
chr10	10789848	.	T	TGA	931.98	PASS	AB=0.783;AC=2;AF=0.036;AN=56;BaseQRankSum=-4.811;DP=677;FS=1.697;HRun=0;HaplotypeScore=101.3060;InbreedingCoeff=-0.0375;MQ=65.69;MQ0=7;MQRankSum=0.204;QD=16.35;ReadPosRankSum=-0.148;VQSLOD=3.7514;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:66.11:0,66,751	0/0:5,0:5:15.05:0,15,183	0/0:28,0:28:38.68:0,39,411	0/1:27,0:24:40.49:40,0,239	0/0:21,0:22:50.94:0,51,563	0/0:21,0:19:48.06:0,48,550	0/0:25,0:25:60.12:0,60,692	0/0:37,0:37:63.10:0,63,716	0/1:7,23:28:34.66:980,0,35	0/0:22,0:22:45.10:0,45,533	0/0:20,0:22:44.92:0,45,473	0/0:14,0:14:29.93:0,30,344	0/0:25,0:25:51.10:0,51,586	0/0:18,0:18:36.10:0,36,428	0/0:22,0:23:56.96:0,57,645	0/0:22,0:21:42.12:0,42,503	0/0:38,0:38:99:0,99,1186	0/0:27,0:27:66.21:0,66,805	0/0:20,0:21:26.88:0,27,290	0/0:20,0:20:51.14:0,51,602	0/0:30,0:29:53.17:0,53,796	0/0:20,0:20:29.99:0,30,324	0/0:25,0:25:54.11:0,54,645	0/0:37,0:38:87.10:0,87,1039	0/0:21,0:20:51.13:0,51,599	0/0:28,0:28:66.20:0,66,794	0/0:23,0:23:57.15:0,57,681	0/0:7,0:7:21.07:0,21,257
chr10	10790397	.	CTCT	C	2901.50	PASS	AB=0.967;AC=33;AF=0.589;AN=56;BaseQRankSum=-1.038;DP=365;FS=3.513;HRun=0;HaplotypeScore=76.3739;InbreedingCoeff=0.2475;MQ=64.45;MQ0=30;MQRankSum=-0.303;QD=9.77;ReadPosRankSum=2.341;VQSLOD=2.7917;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:7:5.33:0,5,94	1/1:4,0:4:8.76:109,9,0	0/0:14,0:11:5.76:0,6,56	0/0:14,0:9:9.73:0,10,82	0/0:12,0:12:15.57:0,16,135	1/1:3,0:3:2.94:18,3,0	1/1:4,0:3:3.97:20,4,0	0/1:19,0:17:8.20:8,0,130	1/1:6,0:6:11.25:69,11,0	1/1:13,0:11:26.08:194,26,0	1/1:11,0:8:8.73:74,9,0	0/1:15,0:13:10.10:81,0,10	0/1:15,0:15:5.53:155,0,6	0/1:12,0:11:29.61:38,0,30	1/1:22,1:22:50.09:567,50,0	1/1:19,3:22:41.35:481,41,0	1/1:22,0:16:17.25:211,17,0	1/1:13,1:11:21.73:255,22,0	0/0:11,0:9:12.09:0,12,74	0/0:2,0:2:5.75:0,6,76	0/0:6,0:5:10.25:0,10,104	0/1:12,0:11:33.44:33,0,50	0/1:15,0:12:3.72:31,0,4	0/1:26,0:23:99:123,0,103	0/1:19,0:19:66.61:67,0,142	1/1:14,0:14:29.75:291,30,0	1/1:15,0:13:17.04:149,17,0	0/1:8,4:10:34.59:110,0,35
chr10	10790399	.	CT	C	2265.60	PASS	AB=0.980;AC=36;AF=0.643;AN=56;BaseQRankSum=-0.971;DP=360;FS=0.672;HRun=1;HaplotypeScore=69.5638;InbreedingCoeff=0.4174;MQ=66.33;MQ0=27;MQRankSum=-0.363;QD=7.73;ReadPosRankSum=1.561;VQSLOD=0.8393;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:7:4.80:0,5,43	1/1:5,0:5:8.93:65,9,0	0/0:15,0:13:6.79:0,7,58	0/0:13,0:9:10.37:0,10,83	0/0:13,0:13:19.46:0,19,142	1/1:3,0:3:2.94:18,3,0	1/1:5,0:4:7.09:36,7,0	0/1:17,1:16:19.96:26,0,20	1/1:6,0:6:10.74:48,11,0	1/1:12,0:10:20.11:115,20,0	1/1:11,0:8:8.70:52,9,0	1/1:5,8:11:8.78:51,9,0	1/1:13,2:15:18.28:231,18,0	0/1:12,0:11:2.61:123,0,3	1/1:20,0:20:46.64:307,47,0	1/1:22,0:22:35.63:229,36,0	1/1:22,1:17:29.97:196,30,0	1/1:12,1:11:23.74:185,24,0	0/0:8,0:7:7.85:0,8,44	0/0:2,0:2:5.75:0,6,51	0/0:5,0:4:5.96:0,6,51	0/1:12,0:11:25.14:48,0,25	1/1:14,0:11:17.05:112,17,0	0/1:25,2:24:2.76:220,0,3	0/1:23,0:22:77:77,0,136	1/1:13,0:13:27.64:182,28,0	1/1:15,0:13:11.26:75,11,0	0/1:11,0:9:13.68:51,0,14
chr10	10790409	.	C	CA	3935.31	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=-3.283;DP=348;FS=13.067;HRun=1;HaplotypeScore=64.2097;InbreedingCoeff=0.7031;MQ=76.48;MQ0=21;MQRankSum=0.293;QD=14.47;ReadPosRankSum=2.207;VQSLOD=1.7770;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:7:8.99:0,9,74	1/1:2,0:2:3:27,3,0	0/0:19,0:15:3.55:0,4,114	0/0:17,0:12:3.75:0,4,140	1/1:11,0:11:4.86:75,5,0	1/1:3,0:3:8.98:82,9,0	1/1:7,1:8:22.87:195,23,0	0/0:13,0:11:3.82:0,4,109	1/1:5,3:8:9.65:65,10,0	1/1:3,11:12:33.02:360,33,0	1/1:4,9:10:20.45:170,20,0	1/1:9,1:8:20.21:188,20,0	1/1:6,6:12:29.96:334,30,0	1/1:3,10:13:4.06:116,4,0	1/1:6,12:18:10.16:275,10,0	1/1:8,16:24:21.93:312,22,0	1/1:5,11:12:15.05:208,15,0	1/1:6,6:10:14.97:157,15,0	0/0:7,0:7:12.01:0,12,122	0/0:4,0:4:3:0,3,26	0/0:6,0:6:9.29:0,9,88	1/1:1,12:13:14.15:164,14,0	1/1:4,7:9:11.99:144,12,0	1/1:7,18:23:23.94:245,24,0	1/1:16,0:16:13.12:116,13,0	1/1:0,16:16:47.96:486,48,0	1/1:2,16:17:9.02:113,9,0	1/1:5,4:7:8.68:103,9,0
chr10	10790410	.	A	AC	1052.83	PASS	AB=0.982;AC=32;AF=0.571;AN=56;BaseQRankSum=-0.874;DP=348;FS=8.768;HRun=9;HaplotypeScore=70.3134;InbreedingCoeff=0.2164;MQ=76.87;MQ0=20;MQRankSum=0.107;QD=3.73;ReadPosRankSum=3.996;VQSLOD=-0.4300;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:7:12.02:0,12,125	1/1:1,0:1:1.25:3,1,0	0/1:19,0:15:10.47:10,0,119	0/1:17,0:12:13.56:14,0,102	0/0:11,0:11:12.04:0,12,132	1/1:5,0:5:3.01:21,3,0	1/1:8,0:8:5.78:39,6,0	0/0:13,0:11:14.99:0,15,161	0/1:7,1:8:17.81:18,0,19	1/1:13,1:12:17.01:82,17,0	0/1:13,0:10:0.45:33,0,0	1/1:10,0:8:4.31:30,4,0	1/1:11,0:11:21.05:133,21,0	0/1:13,1:14:12.73:58,0,13	1/1:15,1:16:22.23:156,22,0	1/1:24,0:24:13.61:106,14,0	1/1:16,0:12:14.74:93,15,0	0/1:12,0:10:5.73:55,0,6	0/0:8,0:7:12.01:0,12,125	0/0:3,0:3:3.01:0,3,34	0/0:6,0:6:9.31:0,9,103	0/1:15,0:15:9.56:43,0,10	0/1:11,0:9:27.67:36,0,28	1/1:23,2:23:16.39:107,16,0	0/0:16,0:16:18.04:0,18,209	1/1:17,0:17:21.69:129,22,0	0/1:17,0:17:8.32:35,0,8	0/1:9,0:7:12.54:29,0,13
chr10	10791140	.	A	AAAATAAAT	5738.47	PASS	AB=0.727;AC=27;AF=0.519;AN=52;BaseQRankSum=3.417;DP=291;FS=8.692;HRun=0;HaplotypeScore=77.2171;InbreedingCoeff=0.7015;MQ=52.59;MQ0=1;MQRankSum=-9.011;QD=46.28;ReadPosRankSum=-3.485;VQSLOD=2.9417;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:45.13:0,45,1059	1/1:3,2:5:12.04:431,12,0	0/0:6,0:5:3.01:0,3,52	0/0:6,0:3:2.84:0,3,14	0/0:5,0:5:9.01:0,9,173	0/0:17,0:17:38.75:0,39,819	0/0:3,0:3:6.02:0,6,154	0/0:47,0:47:87.27:0,87,1908	0/0:8,0:8:11.26:0,11,307	1/1:9,1:10:18.06:517,18,0	1/1:10,1:11:9.03:229,9,0	1/1:3,2:5:9.03:286,9,0	1/1:5,1:7:18.06:504,18,0	1/1:6,0:5:6.02:168,6,0	1/1:9,0:9:9.03:293,9,0	./.	0/1:10,5:16:11.89:900,0,12	1/1:11,2:12:11.99:296,12,0	0/0:16,0:16:33.09:0,33,714	0/0:5,0:5:6.02:0,6,123	0/0:3,0:3:3.01:0,3,77	1/1:6,1:7:3.01:125,3,0	1/1:3,1:5:6.02:228,6,0	./.	0/0:18,0:18:27.08:0,27,643	1/1:6,3:9:24.08:792,24,0	1/1:11,3:14:18.06:707,18,0	1/1:5,2:6:9.01:262,9,0
chr10	10791167	.	T	TA	3163.81	PASS	AB=0.607;AC=40;AF=0.714;AN=56;BaseQRankSum=7.227;DP=290;FS=2.838;HRun=11;HaplotypeScore=58.2330;InbreedingCoeff=0.6832;MQ=60.33;MQ0=0;MQRankSum=-1.912;QD=16.14;ReadPosRankSum=0.444;VQSLOD=4.4772;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:53.77:0,54,418	1/1:0,4:4:9.02:91,9,0	0/0:6,0:5:5.28:0,5,57	0/0:3,0:3:2.97:0,3,23	1/1:2,1:11:23.20:115,23,0	1/1:4,1:19:37.22:207,37,0	1/1:0,0:3:5.68:28,6,0	0/0:32,0:32:38.74:0,39,297	1/1:0,0:7:17.04:86,17,0	1/1:4,10:13:30.06:304,30,0	1/1:2,6:8:14.99:141,15,0	1/1:1,4:5:9.02:91,9,0	0/1:3,7:10:2.14:162,0,2	0/1:2,3:5:8.23:97,0,8	1/1:0,5:5:15.03:152,15,0	1/1:1,6:7:17.99:171,18,0	1/1:7,10:17:27.52:274,28,0	1/1:3,7:9:18.04:183,18,0	0/0:14,0:14:32.81:0,33,252	0/0:12,1:13:2.41:0,2,202	0/0:5,0:5:5.98:0,6,46	1/1:2,6:8:15.92:154,16,0	1/1:1,5:6:6.48:62,6,0	1/1:1,3:4:9.02:91,9,0	1/1:2,1:17:28.41:143,28,0	1/1:4,8:12:24.05:243,24,0	1/1:1,13:14:36.07:365,36,0	1/1:1,9:10:18.04:183,18,0
chr10	10796058	.	CTT	C	6750.89	PASS	AB=0.981;AC=33;AF=0.589;AN=56;BaseQRankSum=2.266;DP=579;FS=1.216;HRun=11;HaplotypeScore=110.9784;InbreedingCoeff=0.8807;MQ=65.60;MQ0=8;MQRankSum=-3.704;QD=20.52;ReadPosRankSum=2.720;VQSLOD=4.2277;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:30:66.13:0,66,701	1/1:1,5:6:18.05:192,18,0	0/0:26,0:11:14.02:0,14,134	0/1:51,0:22:11.08:11,0,196	0/0:1,0:29:64.49:0,64,222	0/0:1,0:12:27.96:0,28,132	0/0:2,0:21:45.43:0,45,192	0/0:11,0:30:28.77:0,29,369	0/0:5,1:17:0.75:0,1,69	1/1:8,15:23:57.13:600,57,0	1/1:5,14:19:45.08:477,45,0	1/1:4,14:18:39.07:414,39,0	1/1:3,7:10:24.04:248,24,0	1/1:5,8:13:27.01:274,27,0	1/1:1,19:20:54.13:573,54,0	1/1:7,11:17:36.06:383,36,0	1/1:3,16:19:51.09:532,51,0	1/1:3,13:16:45.07:467,45,0	0/0:24,0:25:48.19:0,48,435	0/0:5,0:15:29.22:0,29,254	0/0:5,0:12:9.02:0,9,99	1/1:7,9:16:33.03:341,33,0	1/1:4,14:19:36.04:438,36,0	1/1:4,17:21:39.08:415,39,0	0/0:2,1:24:13.50:0,13,114	1/1:5,15:20:47.93:493,48,0	1/1:9,17:26:54.10:574,54,0	1/1:1,11:11:30.08:319,30,0
chr10	10796075	.	C	CT	6923.36	PASS	AB=1.000;AC=33;AF=0.589;AN=56;BaseQRankSum=4.039;DP=604;FS=11.490;HRun=9;HaplotypeScore=106.4298;InbreedingCoeff=0.9140;MQ=56.62;MQ0=12;MQRankSum=-4.021;QD=19.89;ReadPosRankSum=2.201;VQSLOD=4.1555;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:43.55:0,44,485	1/1:1,7:7:18.05:199,18,0	0/0:34,0:5:2.71:0,3,15	0/1:58,0:19:0.98:1,0,58	0/0:33,0:33:92.98:0,93,807	0/0:14,0:14:32.99:0,33,286	0/0:21,0:21:53.99:0,54,469	0/0:33,0:30:20.54:0,21,261	0/0:15,0:14:32.99:0,33,286	1/1:4,18:22:54.14:589,54,0	1/1:4,15:19:42.11:464,42,0	1/1:2,15:16:39.11:430,39,0	1/1:1,9:10:24.06:263,24,0	1/1:7,10:17:30.06:319,30,0	1/1:7,16:22:53.81:570,54,0	1/1:2,13:14:30.08:332,30,0	1/1:3,16:19:54.15:596,54,0	1/1:5,16:21:38.75:421,39,0	0/0:28,0:25:39.29:0,39,337	0/0:16,0:16:16.11:0,16,209	0/0:9,0:8:5.98:0,6,50	1/1:3,9:12:33.09:360,33,0	1/1:3,22:24:57.15:626,57,0	1/1:6,15:21:35.86:390,36,0	0/0:24,0:25:47:0,47,391	1/1:4,21:22:22.07:471,22,0	1/1:2,19:19:54.14:595,54,0	1/1:6,8:12:27.07:298,27,0
chr10	10798500	.	TAA	T	2099.05	PASS	AB=0.672;AC=36;AF=0.643;AN=56;BaseQRankSum=-3.048;DP=332;FS=0.682;HRun=12;HaplotypeScore=54.0084;InbreedingCoeff=0.5950;MQ=81.49;MQ0=9;MQRankSum=-0.429;QD=11.11;ReadPosRankSum=5.908;VQSLOD=1.1424;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:32.81:0,33,396	1/1:2,5:7:15.02:153,15,0	0/0:45,0:21:48.54:0,49,506	0/0:24,0:11:23.78:0,24,193	0/0:8,0:11:7.49:0,7,26	1/1:2,2:4:5.99:61,6,0	1/1:2,1:4:8.46:57,8,0	0/0:15,0:15:22.11:0,22,130	1/1:1,0:3:5.92:39,6,0	1/1:4,6:10:14.96:139,15,0	1/1:1,9:11:17.86:167,18,0	0/1:3,8:12:1.87:107,0,2	1/1:3,5:8:9:92,9,0	1/1:3,7:10:12.01:122,12,0	1/1:3,9:12:9.02:92,9,0	0/1:2,15:17:5.78:217,0,6	1/1:5,9:14:18.02:183,18,0	1/1:5,14:19:28.60:278,29,0	0/1:8,0:8:19.49:19,0,31	0/0:5,0:5:5.96:0,6,45	0/0:7,0:7:13.17:0,13,91	1/1:5,1:6:5.96:60,6,0	0/1:2,4:6:28.46:52,0,28	1/1:3,7:10:11.97:110,12,0	0/0:4,0:16:9.98:0,10,35	1/1:1,6:7:11.98:121,12,0	1/1:2,10:12:11.98:122,12,0	1/1:0,7:8:11.76:103,12,0
chr10	10798511	.	A	AG	47.17	PASS	AB=0.917;AC=6;AF=0.107;AN=56;BaseQRankSum=-0.911;DP=351;FS=1.079;HRun=0;HaplotypeScore=71.2237;InbreedingCoeff=0.5266;MQ=75.51;MQ0=13;MQRankSum=-0.984;QD=1.75;ReadPosRankSum=-1.243;VQSLOD=1.8759;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:34.56:0,35,246	0/0:5,0:5:14.24:0,14,73	0/0:48,0:20:24.08:0,24,343	0/0:28,0:13:10.96:0,11,145	0/0:13,0:12:19.57:0,20,149	0/0:9,0:8:17.68:0,18,97	0/1:6,0:5:5.17:35,0,5	1/1:6,2:8:6.14:72,6,0	0/0:2,0:2:5.36:0,5,22	0/0:9,0:9:19.80:0,20,103	0/0:15,0:15:28.96:0,29,168	0/0:12,0:12:13.52:0,14,64	0/0:10,0:10:14.41:0,14,80	0/0:10,0:10:11.50:0,12,61	0/0:13,0:13:17.48:0,17,104	0/0:20,0:20:31.80:0,32,181	0/0:9,0:9:16.60:0,17,84	0/0:18,0:18:34.63:0,35,196	0/1:4,1:5:3.82:38,0,4	0/0:5,0:5:0:0,0,0	1/1:7,1:8:2.89:18,3,0	0/0:5,0:5:13.97:0,14,82	0/0:8,0:7:10.51:0,11,58	0/0:10,0:10:11.13:0,11,52	0/0:16,0:16:14.94:0,15,81	0/0:14,0:14:26.28:0,26,167	0/0:16,0:15:15.37:0,15,115	0/0:9,0:9:14.50:0,14,86
chr10	10800230	.	A	AGAAAGAAAG	1205.39	PASS	AB=0.542;AC=3;AF=0.054;AN=56;BaseQRankSum=2.927;DP=519;FS=10.233;HRun=0;HaplotypeScore=167.5934;InbreedingCoeff=0.6464;MQ=47.12;MQ0=22;MQRankSum=-2.540;QD=19.76;ReadPosRankSum=4.987;VQSLOD=1.9621;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:24:45.42:0,45,780	0/0:5,0:5:15.05:0,15,255	0/0:29,0:5:7.81:0,8,37	0/0:25,0:6:17.65:0,18,195	1/1:20,0:30:69.34:854,69,0	0/0:7,0:7:11.99:0,12,117	0/0:17,0:16:22.49:0,22,350	0/0:32,0:25:57.01:0,57,920	0/0:15,0:14:37.09:0,37,481	0/0:15,0:13:31.15:0,31,556	0/0:11,0:11:30.50:0,31,393	0/0:19,0:19:26.96:0,27,580	0/0:13,0:13:39.04:0,39,627	0/0:12,0:12:33.08:0,33,494	0/0:18,0:17:45.14:0,45,818	0/0:21,0:19:51.16:0,51,881	0/0:17,0:16:28.89:0,29,545	0/0:31,0:31:84.38:0,84,1447	0/0:32,0:28:63.31:0,63,974	0/0:20,0:19:41.22:0,41,751	0/0:13,0:12:25.90:0,26,463	0/0:16,0:16:42.14:0,42,788	0/0:9,0:8:21.04:0,21,391	0/0:12,0:9:18.06:0,18,405	0/1:4,18:26:7.11:458,0,7	0/0:18,0:17:45.10:0,45,786	0/0:17,0:16:39.60:0,40,770	0/0:8,0:6:14.94:0,15,291
chr10	10800234	.	A	AG	567.74	PASS	AB=0.947;AC=4;AF=0.071;AN=56;BaseQRankSum=4.665;DP=508;FS=8.207;HRun=0;HaplotypeScore=87.1449;InbreedingCoeff=0.3608;MQ=44.32;MQ0=22;MQRankSum=-0.220;QD=7.47;ReadPosRankSum=2.926;VQSLOD=3.1577;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:24:45.49:0,45,333	0/0:5,0:5:7.89:0,8,58	0/0:26,0:2:2.68:0,3,11	0/0:25,0:6:5.33:0,5,64	1/1:32,3:30:66.38:497,66,0	0/0:5,0:5:5.09:0,5,20	0/1:15,2:16:30.36:45,0,30	0/0:35,0:28:53.60:0,54,403	0/0:15,0:14:11.63:0,12,182	0/0:15,0:13:17.87:0,18,81	0/0:9,0:9:0.58:0,1,52	0/0:22,0:22:24.48:0,24,129	0/0:12,0:12:27.87:0,28,159	0/0:11,0:11:13.63:0,14,85	0/0:18,0:17:10.97:0,11,127	0/0:21,0:19:18.07:0,18,117	0/0:17,0:16:12.83:0,13,121	0/0:30,0:30:25.53:0,26,237	0/0:32,0:28:65.59:0,66,465	0/0:21,0:20:44.35:0,44,298	0/0:14,0:13:30.21:0,30,224	0/0:15,0:15:32.45:0,32,162	0/0:9,0:8:18.91:0,19,128	0/0:12,0:9:9.20:0,9,53	0/1:24,0:24:3.26:139,0,3	0/0:14,0:14:31.95:0,32,178	0/0:17,0:16:36.78:0,37,195	0/0:6,0:4:8.24:0,8,42
chr10	10800235	.	A	AG	1934.52	PASS	AB=0.930;AC=28;AF=0.500;AN=56;BaseQRankSum=-4.308;DP=500;FS=84.202;HRun=0;HaplotypeScore=84.2506;InbreedingCoeff=0.3153;MQ=43.95;MQ0=22;MQRankSum=1.205;QD=7.33;ReadPosRankSum=2.892;VQSLOD=0.3565;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:25:47.59:0,48,344	0/1:5,0:5:8.20:46,0,8	0/0:26,0:2:2.90:0,3,16	0/0:24,0:6:11.80:0,12,74	0/0:35,0:30:44.15:0,44,240	0/1:4,0:4:4.12:8,0,4	0/1:16,0:15:4.03:4,0,44	0/0:34,0:27:50.18:0,50,366	0/1:15,0:14:5.03:5,0,60	1/1:6,6:11:14.66:133,15,0	0/1:6,3:9:2.91:78,0,3	0/1:19,3:22:13.05:103,0,13	0/1:10,1:11:7.21:72,0,7	1/1:11,0:11:10.23:98,10,0	1/1:12,6:17:14.01:298,14,0	1/1:17,4:19:34.57:274,35,0	1/1:9,6:16:2.74:97,3,0	0/1:25,4:30:0.68:307,0,1	0/0:32,0:28:67.96:0,68,476	0/0:21,0:20:43.39:0,43,281	0/0:14,0:13:29.70:0,30,216	1/1:7,8:15:16.26:203,16,0	0/1:8,0:8:32.02:32,0,35	1/1:8,3:9:5.21:119,5,0	0/0:22,1:23:13.25:0,13,77	0/1:13,0:13:26.03:26,0,70	1/1:12,5:16:8.02:168,8,0	1/1:4,2:4:4.50:45,5,0
chr10	10800253	.	AGAAAGAAAGAAAGAAAGAAAGAAC	A	7158.73	PASS	AB=0.982;AC=35;AF=0.625;AN=56;BaseQRankSum=0.185;DP=341;FS=3.489;HRun=0;HaplotypeScore=194.2061;InbreedingCoeff=0.5737;MQ=38.51;MQ0=12;MQRankSum=-2.672;QD=35.62;ReadPosRankSum=-2.977;VQSLOD=3.7039;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:14,0:12:20.76:21,0,229	1/1:5,0:5:12.03:402,12,0	0/0:8,0:3:4.02:0,4,17	0/0:13,0:4:12.04:0,12,321	0/0:34,0:29:75.05:0,75,4289	1/1:12,0:11:33.11:815,33,0	1/1:12,0:11:5.80:393,6,0	0/0:19,0:15:12.44:0,12,266	0/1:8,0:7:20.17:315,0,20	1/1:9,0:8:9.02:259,9,0	0/0:2,0:2:0:0,0,0	1/1:7,16:23:3.79:354,4,0	1/1:9,0:9:10.51:473,11,0	1/1:9,0:9:8.63:315,9,0	1/1:8,0:8:9.47:389,9,0	1/1:13,0:12:4.41:182,4,0	1/1:12,0:11:17.03:502,17,0	0/1:17,0:18:44.52:407,0,45	0/0:22,0:19:37.94:0,38,694	0/0:9,0:8:22.94:0,23,225	0/0:10,0:10:23.36:0,23,376	1/1:7,0:7:5.97:129,6,0	1/1:5,0:4:5.75:149,6,0	1/1:9,0:9:15.03:339,15,0	0/0:20,0:20:26.36:0,26,1500	1/1:10,0:9:17.99:589,18,0	1/1:15,0:15:26.13:892,26,0	1/1:3,0:2:6.02:234,6,0
chr10	10800261	.	AG	A	2418.38	PASS	AB=0.667;AC=30;AF=0.536;AN=56;BaseQRankSum=4.290;DP=283;FS=1.859;HRun=1;HaplotypeScore=86.0390;InbreedingCoeff=0.7575;MQ=51.02;MQ0=8;MQRankSum=-6.043;QD=21.99;ReadPosRankSum=1.078;VQSLOD=3.8214;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:11:24:0,24,279	1/1:1,5:7:18.06:239,18,0	0/0:9,0:5:11.97:0,12,107	0/0:11,0:6:8.92:0,9,101	0/0:28,0:24:69.23:0,69,1025	0/0:12,0:11:32.37:0,32,241	0/0:14,0:13:38.74:0,39,350	0/0:14,0:11:30.03:0,30,368	0/0:6,0:5:7.19:0,7,53	1/1:0,3:3:9.03:123,9,0	1/1:0,2:2:5.69:52,6,0	1/1:18,0:19:5.46:45,5,0	1/1:2,5:8:14.95:187,15,0	1/1:1,7:8:13.85:205,14,0	1/1:2,4:6:14.64:205,15,0	1/1:3,3:6:8.64:101,9,0	1/1:0,9:9:26.96:323,27,0	0/1:4,3:8:19.32:137,0,19	0/0:23,0:21:56.08:0,56,630	0/0:10,0:10:29.87:0,30,356	0/0:13,0:13:29.88:0,30,296	1/1:0,2:2:6.02:83,6,0	1/1:2,1:2:5.81:54,6,0	1/1:0,6:7:17.97:218,18,0	0/0:20,0:20:30.04:0,30,380	1/1:1,9:9:23.87:282,24,0	1/1:2,8:10:26.77:352,27,0	0/1:1,0:2:7.36:23,0,7
chr10	10800265	.	AGAAAGAAAGAAC	A	7060.87	PASS	AB=1.000;AC=49;AF=0.875;AN=56;BaseQRankSum=-2.769;DP=274;FS=19.262;HRun=0;HaplotypeScore=119.6250;InbreedingCoeff=0.6088;MQ=56.03;MQ0=5;MQRankSum=-0.666;QD=30.43;ReadPosRankSum=-1.546;VQSLOD=2.5666;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:9,0:8:17.22:138,17,0	1/1:6,0:6:17.98:264,18,0	0/0:9,0:7:11.82:0,12,129	0/0:4,0:4:2.17:0,2,53	0/0:29,0:25:40.59:0,41,1501	1/1:12,0:11:33.04:504,33,0	1/1:15,0:14:38.70:390,39,0	1/1:9,6:12:29.95:467,30,0	1/1:5,0:5:12.03:227,12,0	1/1:5,0:5:15:199,15,0	1/1:2,0:2:2.60:19,3,0	1/1:17,0:17:5.49:196,5,0	1/1:6,0:6:15.03:293,15,0	1/1:8,0:8:17.93:255,18,0	1/1:8,0:8:23.98:344,24,0	1/1:5,0:4:14.91:149,15,0	1/1:10,0:9:22.05:365,22,0	1/1:8,0:8:16.81:242,17,0	1/1:15,6:20:56.86:705,57,0	1/1:4,5:9:27.06:355,27,0	1/1:13,0:13:26.15:440,26,0	1/1:3,0:3:8.90:61,9,0	1/1:4,0:3:8.69:82,9,0	1/1:8,0:8:17.89:191,18,0	0/1:18,0:18:34.08:34,0,539	1/1:11,0:10:26.95:389,27,0	1/1:11,0:11:33.05:598,33,0	1/1:3,0:3:9.01:154,9,0
chr10	10803801	.	TA	T	119.92	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=4.086;DP=382;FS=6.171;HRun=8;HaplotypeScore=65.3019;InbreedingCoeff=0.7463;MQ=60.93;MQ0=5;MQRankSum=-3.314;QD=13.32;ReadPosRankSum=-1.068;VQSLOD=2.9586;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:72.22:0,72,864	0/0:5,1:6:14.93:0,15,181	0/0:18,0:12:23.61:0,24,245	0/0:18,0:9:4.02:0,4,80	0/0:13,0:13:33.08:0,33,381	0/0:14,1:10:24.04:0,24,287	0/0:8,1:7:0.36:0,0,130	0/0:32,0:31:78.18:0,78,906	0/0:8,1:9:10.67:0,11,240	1/1:0,4:4:12.02:115,12,0	1/1:0,5:5:12.02:115,12,0	0/0:12,0:12:30:0,30,318	0/0:13,1:13:26.67:0,27,292	0/0:13,0:12:26.69:0,27,314	0/0:9,0:8:18.02:0,18,202	0/0:13,0:13:25.89:0,26,295	0/0:20,0:18:31.25:0,31,382	0/0:9,0:8:14.58:0,15,148	0/0:19,0:18:45.10:0,45,527	0/0:20,0:20:48.08:0,48,561	0/0:13,0:13:27.08:0,27,325	0/0:7,0:7:15:0,15,165	0/0:9,0:9:23.98:0,24,245	0/0:11,0:11:33.10:0,33,398	0/0:13,1:14:21.68:0,22,366	0/0:5,0:5:15.05:0,15,181	0/0:21,1:22:35.14:0,35,532	0/0:10,0:10:30.09:0,30,370
chr10	10803864	.	TGA	T	425.72	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=3.178;DP=390;FS=2.784;HRun=0;HaplotypeScore=60.9056;InbreedingCoeff=0.9537;MQ=91.76;MQ0=0;MQRankSum=-1.148;QD=28.38;ReadPosRankSum=1.848;VQSLOD=4.7773;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:87.26:0,87,1479	0/0:5,0:5:15.05:0,15,270	0/0:26,0:22:63.19:0,63,1056	0/0:19,0:19:54.05:0,54,883	1/1:2,6:8:18.06:252,18,0	0/0:9,0:9:27.09:0,27,486	0/0:9,0:9:27.09:0,27,486	0/0:28,0:28:81.28:0,81,1453	0/0:9,0:9:27.08:0,27,455	0/0:13,0:13:36.12:0,36,648	0/0:7,0:7:18.06:0,18,323	0/0:16,0:16:48.16:0,48,864	0/0:8,0:8:24.08:0,24,424	0/0:5,0:5:12.04:0,12,214	0/0:13,0:13:39.13:0,39,678	0/0:20,0:20:60.19:0,60,1044	0/0:6,0:6:18.06:0,18,323	0/0:13,0:13:36.04:0,36,580	0/0:19,0:19:57.19:0,57,994	0/0:16,0:16:45.15:0,45,798	0/0:24,0:25:67.09:0,67,1144	0/0:7,0:7:21.06:0,21,349	0/0:13,0:13:36.12:0,36,647	0/0:6,0:6:18.06:0,18,320	1/1:1,6:7:21.07:292,21,0	0/0:14,0:14:42.14:0,42,757	0/0:18,0:18:54.19:0,54,965	0/0:14,0:14:36.12:0,36,631
chr10	10805847	.	C	CGT	101.96	PASS	AC=6;AF=0.150;AN=40;BaseQRankSum=0.347;DP=108;FS=4.766;HRun=0;HaplotypeScore=16.9903;InbreedingCoeff=0.4920;MQ=63.90;MQ0=1;MQRankSum=-1.344;QD=4.63;ReadPosRankSum=-2.555;VQSLOD=0.7411;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,3:6:8.70:131,9,0	./.	0/0:2,0:1:3.01:0,3,49	0/0:3,0:3:9.03:0,9,130	./.	0/0:2,0:2:6.02:0,6,98	0/0:13,0:14:29.51:0,30,449	1/1:1,0:1:3:28,3,0	0/0:3,0:3:9.03:0,9,147	0/0:2,0:2:6.01:0,6,76	./.	0/0:8,0:8:24.08:0,24,379	0/0:3,0:3:9.03:0,9,143	0/0:1,0:1:3.01:0,3,48	0/0:3,0:3:9.03:0,9,139	0/0:3,0:3:9.03:0,9,147	0/0:8,0:8:24.08:0,24,383	0/0:10,0:10:27.09:0,27,435	./.	./.	1/1:7,7:14:2.59:48,3,0	./.	./.	0/0:15,0:15:42.04:0,42,602	0/0:2,0:2:6.02:0,6,98	0/0:3,0:3:8.99:0,9,118	0/0:1,0:1:3.01:0,3,49	./.
chr10	10805848	.	ACCG	A	45.24	PASS	AC=2;AF=0.111;AN=18;BaseQRankSum=1.534;DP=105;FS=2.669;HRun=0;HaplotypeScore=17.5298;MQ=63.58;MQ0=1;MQRankSum=0.658;QD=3.23;ReadPosRankSum=-1.722;VQSLOD=0.8323;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	0/0:3,0:3:2.99:0,3,23	./.	./.	1/1:9,5:14:8.01:120,8,0	./.	./.	./.	./.	./.	0/0:3,0:3:5.97:0,6,78	./.	0/0:3,0:3:3.01:0,3,59	0/0:3,0:3:6:0,6,83	0/0:8,0:8:21.05:0,21,376	0/0:10,0:10:21:0,21,370	./.	./.	0/0:15,0:16:0:0,0,0	./.	./.	0/0:11,0:11:27.02:0,27,454	./.	./.	./.	./.
chr10	10806029	.	G	GC	3033.87	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-9.540;DP=379;FS=18.882;HRun=8;HaplotypeScore=67.6236;InbreedingCoeff=0.9742;MQ=88.29;MQ0=0;MQRankSum=-0.768;QD=22.98;ReadPosRankSum=-2.576;VQSLOD=1.7370;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:4,21:25:53.85:622,54,0	0/0:6,0:6:14.98:0,15,131	0/0:16,0:16:38.99:0,39,350	0/0:13,0:13:19.99:0,20,161	1/1:2,7:9:15.04:171,15,0	0/0:10,0:10:26.99:0,27,243	0/0:17,0:17:48.02:0,48,439	1/1:2,12:14:36.06:390,36,0	0/0:8,0:8:21.01:0,21,192	0/0:7,0:7:15:0,15,137	0/0:8,0:8:18:0,18,165	0/0:15,0:15:45.02:0,45,411	0/0:9,0:9:24.01:0,24,220	0/0:11,0:11:24:0,24,220	0/0:14,0:14:32.99:0,33,297	0/0:12,0:12:30:0,30,275	0/0:25,0:25:60.02:0,60,549	0/0:22,0:22:60.01:0,60,544	1/1:0,8:8:24.06:266,24,0	1/1:1,5:6:15.04:173,15,0	1/1:8,51:59:74.92:1366,75,0	0/0:7,0:7:18:0,18,165	0/0:12,0:12:30.01:0,30,275	0/0:10,0:10:20.99:0,21,188	1/1:1,10:11:21.06:243,21,0	0/0:12,0:12:27.01:0,27,247	0/0:9,0:9:21:0,21,192	0/0:4,0:4:12.01:0,12,110
chr10	10806908	.	AATTGAAT	A	28716.98	PASS	AB=1.000;AC=43;AF=0.768;AN=56;BaseQRankSum=15.958;DP=706;FS=5.586;HRun=0;HaplotypeScore=179.3398;InbreedingCoeff=0.9100;MQ=70.92;MQ0=1;MQRankSum=-17.781;QD=55.44;ReadPosRankSum=2.388;VQSLOD=4.7542;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,126,4932	1/1:2,13:15:33.05:781,33,0	0/1:16,0:16:7.36:7,0,444	0/0:18,0:18:14.05:0,14,734	1/1:0,25:26:75.17:1836,75,0	1/1:1,18:19:36.08:889,36,0	1/1:1,23:24:48.12:1204,48,0	0/0:50,0:50:99:0,144,5268	1/1:2,18:20:45.15:1162,45,0	1/1:1,17:18:51.17:1271,51,0	1/1:1,13:14:26.98:590,27,0	1/1:3,32:34:72.25:1893,72,0	1/1:2,28:30:78.27:2050,78,0	1/1:1,23:25:60.21:1578,60,0	1/1:3,51:54:99:3378,129,0	1/1:0,48:48:99:2623,102,0	1/1:2,17:19:27.56:712,28,0	1/1:0,12:13:27.09:698,27,0	0/0:27,0:27:72.24:0,72,2671	0/0:20,0:20:57.18:0,57,2175	0/0:29,0:29:81.26:0,81,3167	1/1:0,16:16:36:947,36,0	1/1:1,18:19:42.10:1047,42,0	1/1:1,13:14:20.98:435,21,0	1/1:0,21:21:45.15:1156,45,0	1/1:4,24:28:69.21:1677,69,0	1/1:0,35:35:87.30:2291,87,0	1/1:0,9:9:21.03:493,21,0
chr10	10808554	.	T	TTTTTTTTTTTTC	6641.75	PASS	AB=1.000;AC=31;AF=0.554;AN=56;BaseQRankSum=-3.060;DP=546;FS=2.827;HRun=0;HaplotypeScore=245.1961;InbreedingCoeff=-0.0546;MQ=56.34;MQ0=4;MQRankSum=-3.263;QD=14.10;ReadPosRankSum=-3.198;VQSLOD=3.5269;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:36,0:34:33.47:1081,33,0	0/1:5,0:5:0.34:0,0,2	0/0:17,0:13:12.67:0,13,153	0/0:14,0:10:11.31:0,11,82	0/0:22,0:21:10.37:0,10,165	1/1:25,0:25:29.46:550,29,0	1/1:10,0:10:19.24:169,19,0	1/1:37,0:36:68.85:1242,69,0	1/1:11,0:11:21.63:211,22,0	0/1:14,0:14:58.96:59,0,89	0/1:12,0:11:38.55:69,0,39	0/1:27,0:27:40.14:98,0,40	0/1:19,0:18:21.67:22,0,96	0/1:16,0:15:12.63:14,0,13	0/1:15,0:15:3.27:24,0,3	0/1:27,0:27:5.61:6,0,407	0/1:32,0:31:99:109,0,202	0/1:16,0:16:91.63:92,0,284	1/1:9,11:38:56.03:1983,56,0	1/1:27,0:26:40.61:671,41,0	1/1:8,0:6:3.01:36,3,0	0/1:10,0:10:11.08:17,0,11	0/0:16,0:16:3.72:0,4,21	0/1:15,0:14:75.64:76,0,211	0/1:20,0:20:7.52:8,0,117	0/1:34,0:32:66.22:66,0,74	0/1:16,0:16:17.16:40,0,17	0/0:6,0:6:6.06:0,6,156
chr10	10808562	.	TTTC	T	3996.74	PASS	AB=0.997;AC=44;AF=0.786;AN=56;BaseQRankSum=-7.047;DP=527;FS=6.607;HRun=0;HaplotypeScore=108.7521;InbreedingCoeff=0.0536;MQ=48.67;MQ0=5;MQRankSum=0.297;QD=8.07;ReadPosRankSum=-3.439;VQSLOD=1.5584;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:39,1:37:66.35:66,0,388	1/1:3,0:3:5.77:30,6,0	0/0:17,0:11:6.98:0,7,177	0/0:15,0:8:8.15:0,8,74	0/1:20,0:19:70.80:71,0,154	0/1:25,0:25:99:165,0,136	0/1:9,0:9:30.43:30,0,49	0/1:38,0:37:99:126,0,231	0/1:11,0:11:20.25:20,0,70	1/1:14,0:14:30.49:188,30,0	1/1:11,1:11:21.99:185,22,0	1/1:23,0:23:51.73:345,52,0	1/1:17,0:16:18.67:165,19,0	1/1:13,0:12:22.81:122,23,0	1/1:14,1:15:10.38:46,10,0	1/1:19,3:22:46.67:375,47,0	1/1:30,0:29:66.22:438,66,0	1/1:18,0:18:42.04:303,42,0	0/1:35,0:34:99:149,0,123	0/1:29,0:26:99:133,0,124	1/1:5,0:3:2.50:9,2,0	1/1:8,0:8:15.42:124,15,0	1/1:13,0:13:9.39:50,9,0	1/1:15,0:14:33.77:200,34,0	1/1:22,0:22:2.26:19,2,0	1/1:32,2:32:33.06:399,33,0	1/1:17,0:17:20.92:132,21,0	1/1:7,0:7:15.45:108,15,0
chr10	10808563	.	TTC	T	6018.67	PASS	AB=1.000;AC=45;AF=0.804;AN=56;BaseQRankSum=-7.540;DP=524;FS=4.068;HRun=0;HaplotypeScore=93.8847;InbreedingCoeff=0.0212;MQ=48.58;MQ0=5;MQRankSum=0.929;QD=11.87;ReadPosRankSum=-2.933;VQSLOD=3.5705;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:40,0:37:43.44:43,0,302	1/1:3,0:3:5.91:56,6,0	0/0:17,0:11:5.89:0,6,127	0/1:14,0:8:1.11:1,0,59	0/1:20,0:19:29.66:120,0,30	0/1:25,0:25:27.48:241,0,27	0/1:9,0:9:0.09:64,0,0	0/1:38,0:37:99:192,0,199	0/1:10,0:10:12.17:51,0,12	1/1:4,10:14:37.82:328,38,0	1/1:10,2:11:28.24:213,28,0	1/1:23,0:23:63.31:466,63,0	1/1:16,1:16:42.56:331,43,0	1/1:13,0:12:29.47:181,29,0	1/1:5,10:15:11.92:115,12,0	1/1:20,2:22:60.85:534,61,0	1/1:27,2:28:68.80:551,69,0	1/1:15,3:18:43.41:397,43,0	0/1:35,0:34:99:176,0,182	0/1:30,0:26:99:112,0,123	1/1:4,0:2:2.60:10,3,0	1/1:7,0:7:17.09:127,17,0	1/1:1,12:13:11.83:117,12,0	1/1:12,3:14:35.82:348,36,0	1/1:19,3:22:11.44:88,11,0	1/1:30,4:32:74.77:653,75,0	1/1:16,1:17:43.43:328,43,0	1/1:5,2:7:16.84:175,17,0
chr10	10808564	.	TC	T	6204.36	PASS	AB=0.968;AC=49;AF=0.875;AN=56;BaseQRankSum=-4.023;DP=523;FS=2.493;HRun=1;HaplotypeScore=87.8269;InbreedingCoeff=0.0458;MQ=47.18;MQ0=5;MQRankSum=1.566;QD=12.29;ReadPosRankSum=0.606;VQSLOD=3.5012;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:40,0:37:56.91:57,0,158	1/1:0,2:2:5.92:42,6,0	0/0:18,0:11:0.85:0,1,80	0/1:14,0:7:14.09:14,0,50	1/1:20,0:19:41.53:251,42,0	1/1:25,0:25:53.94:369,54,0	1/1:8,1:9:21.45:147,21,0	0/1:34,4:37:99:165,0,160	1/1:11,0:11:20.75:125,21,0	1/1:10,4:14:38.60:279,39,0	1/1:12,0:11:27.29:220,27,0	1/1:22,1:23:64.04:441,64,0	1/1:15,3:17:48.75:338,49,0	1/1:10,4:13:29.78:194,30,0	1/1:11,3:14:11.95:95,12,0	1/1:15,7:22:60.07:484,60,0	1/1:27,2:28:72.11:506,72,0	1/1:16,2:18:43.16:334,43,0	0/1:32,0:31:99:208,0,170	0/1:28,2:26:96.94:158,0,97	1/1:4,0:2:3.07:11,3,0	1/1:7,0:7:19.17:146,19,0	1/1:12,1:13:11.91:89,12,0	1/1:13,2:14:35.76:269,36,0	1/1:4,17:21:11.95:108,12,0	1/1:31,3:32:87.62:638,88,0	1/1:17,2:19:43.55:362,44,0	1/1:6,1:7:17.98:155,18,0
chr10	10808565	.	C	CTTTT	2693.58	PASS	AB=0.980;AC=25;AF=0.446;AN=56;BaseQRankSum=-6.550;DP=526;FS=0.984;HRun=13;HaplotypeScore=126.0369;InbreedingCoeff=-0.1646;MQ=46.33;MQ0=6;MQRankSum=-3.825;QD=6.37;ReadPosRankSum=-3.945;VQSLOD=-0.3974;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:32,7:36:25.31:731,0,25	0/0:2,0:2:1.68:0,2,18	0/0:17,0:10:5.01:0,5,78	0/0:13,0:6:11.04:0,11,64	0/0:21,0:20:18.19:0,18,101	1/1:25,0:25:41.71:294,42,0	1/1:10,0:10:15.73:91,16,0	0/1:34,2:35:99:391,0,236	1/1:12,0:12:15.74:97,16,0	0/1:15,0:15:39.14:39,0,41	0/1:12,0:11:2.14:62,0,2	0/1:24,0:24:8.72:50,0,9	0/1:18,0:17:22.80:60,0,23	1/1:14,0:13:0.21:23,0,0	0/1:15,0:15:13.96:16,0,14	0/0:23,0:23:26.20:0,26,181	0/1:30,0:29:46.25:61,0,46	0/1:18,0:18:53.69:87,0,54	0/1:33,0:31:99:404,0,277	0/1:25,3:24:99:240,0,188	1/1:4,0:2:5.93:40,6,0	0/0:6,0:6:0.16:0,0,1	0/0:14,0:14:5.64:0,6,33	0/1:14,0:13:33.10:33,0,45	0/1:23,0:23:3.47:3,0,26	0/1:35,0:33:43.10:73,0,43	0/1:18,0:18:19.46:62,0,19	0/0:7,0:7:8.59:0,9,59
chr10	10808884	.	T	TA	7655.66	PASS	AB=1.000;AC=37;AF=0.661;AN=56;BaseQRankSum=-3.953;DP=534;FS=3.792;HRun=9;HaplotypeScore=62.6138;InbreedingCoeff=0.8870;MQ=66.96;MQ0=0;MQRankSum=0.075;QD=22.85;ReadPosRankSum=1.588;VQSLOD=5.9215;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,105,907	1/1:2,5:7:9.02:100,9,0	0/0:10,0:7:6.87:0,7,54	0/1:9,0:9:17.05:17,0,89	1/1:4,18:22:25.02:489,25,0	0/0:23,0:23:65.88:0,66,559	0/0:19,0:19:50.98:0,51,443	0/0:39,0:39:39.09:0,39,570	0/0:15,0:15:41.99:0,42,365	1/1:6,16:22:45.12:498,45,0	1/1:4,13:17:36.10:398,36,0	1/1:3,20:23:54.15:597,54,0	1/1:2,19:21:54.15:597,54,0	1/1:1,15:16:16.06:405,16,0	1/1:3,21:24:25.08:505,25,0	1/1:7,18:25:39.11:431,39,0	1/1:2,23:25:63.16:690,63,0	1/1:5,17:22:25.09:505,25,0	0/0:19,0:19:34.23:0,34,423	0/0:12,0:12:32.99:0,33,286	0/0:22,0:22:62.99:0,63,547	1/1:1,8:9:21.06:232,21,0	1/1:2,4:6:12.03:133,12,0	1/1:0,15:15:42.11:465,42,0	1/1:0,22:22:51.14:564,51,0	1/1:6,14:20:36.10:398,36,0	1/1:1,17:18:45.12:498,45,0	1/1:4,8:12:12.03:133,12,0
chr10	10809191	.	A	ACG	4301.94	PASS	AB=0.625;AC=41;AF=0.732;AN=56;BaseQRankSum=0.569;DP=526;FS=2.916;HRun=0;HaplotypeScore=94.5656;InbreedingCoeff=0.8194;MQ=62.73;MQ0=14;MQRankSum=1.229;QD=10.89;ReadPosRankSum=3.330;VQSLOD=4.1816;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:30:56.70:0,57,435	1/1:2,0:2:2.98:21,3,0	0/0:13,0:8:8.09:0,8,91	0/0:21,0:12:26.93:0,27,269	1/1:23,0:23:33.17:317,33,0	1/1:17,0:16:27.98:226,28,0	0/1:10,15:24:30.42:94,0,30	0/0:18,0:18:30.29:0,30,246	1/1:17,0:17:18.28:172,18,0	1/1:24,0:23:44.98:349,45,0	1/1:17,0:17:29.63:174,30,0	1/1:30,0:30:58.47:363,58,0	1/1:17,0:17:11.54:166,12,0	1/1:19,0:19:36.02:190,36,0	1/1:17,0:17:28.01:184,28,0	1/1:12,0:12:4.61:153,5,0	1/1:34,0:34:68.05:465,68,0	1/1:24,0:24:34.15:279,34,0	0/0:15,0:14:24.01:0,24,215	0/0:14,0:14:17.64:0,18,143	0/0:19,0:19:35.78:0,36,276	1/1:10,0:9:22.78:142,23,0	1/1:14,0:14:7.93:90,8,0	1/1:26,0:26:52.05:296,52,0	1/1:17,0:16:12.43:62,12,0	1/1:21,0:20:24.26:202,24,0	1/1:21,0:20:37.71:235,38,0	1/1:8,0:8:21.31:120,21,0
chr10	10809199	.	GCA	G	2509.04	PASS	AB=0.861;AC=39;AF=0.813;AN=48;BaseQRankSum=1.819;DP=518;FS=3.423;HRun=0;HaplotypeScore=97.1506;InbreedingCoeff=0.1377;MQ=59.52;MQ0=21;MQRankSum=0.160;QD=6.00;ReadPosRankSum=1.113;VQSLOD=3.1894;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:32:2.84:14,3,0	1/1:2,0:2:2.96:19,3,0	./.	./.	1/1:21,3:24:11.99:117,12,0	0/0:18,0:17:18:0,18,193	0/1:22,1:22:17.63:18,0,119	./.	0/1:16,1:17:32.43:32,0,75	1/1:17,5:21:15.01:151,15,0	1/1:15,3:18:17.77:149,18,0	1/1:26,3:29:29.89:267,30,0	1/1:10,3:16:14.70:125,15,0	1/1:10,8:20:23.62:222,24,0	1/1:8,0:20:13.96:69,14,0	1/1:10,2:14:14.66:113,15,0	1/1:25,7:33:26.01:266,26,0	1/1:14,8:23:29.87:294,30,0	./.	0/1:7,0:16:8.65:30,0,9	0/0:25,0:22:0.89:0,1,2	0/1:10,1:10:14.23:44,0,14	0/1:9,1:11:20.47:26,0,20	1/1:17,7:24:32.87:318,33,0	1/1:4,9:12:6.02:65,6,0	1/1:16,5:20:11.59:96,12,0	1/1:12,5:17:14.67:144,15,0	1/1:6,2:8:6.02:65,6,0
chr10	10809455	.	G	GAA	5750.18	PASS	AB=0.515;AC=31;AF=0.554;AN=56;BaseQRankSum=-4.498;DP=533;FS=4.931;HRun=11;HaplotypeScore=69.9682;InbreedingCoeff=0.9106;MQ=64.63;MQ0=4;MQRankSum=0.581;QD=19.56;ReadPosRankSum=0.827;VQSLOD=4.0158;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:30:71.27:0,71,646	1/1:2,8:10:18.53:261,19,0	0/0:10,0:6:9:0,9,87	0/0:19,0:11:10.16:0,10,143	0/0:27,0:30:47.83:0,48,511	0/0:17,0:20:41.74:0,42,439	0/0:27,0:27:68.17:0,68,622	0/0:27,0:27:18.68:0,19,506	0/0:8,0:8:17.97:0,18,174	1/1:8,17:26:28.52:607,29,0	1/1:2,12:14:33.11:467,33,0	1/1:6,20:28:32.78:355,33,0	1/1:3,12:16:23.10:296,23,0	0/1:1,14:17:8.02:240,0,8	1/1:3,17:22:37.46:458,37,0	1/1:2,16:18:29.99:387,30,0	1/1:2,23:27:45.14:626,45,0	1/1:3,15:18:15.05:216,15,0	0/0:22,0:25:35.29:0,35,471	0/0:14,0:14:36.01:0,36,338	0/0:10,0:10:14.91:0,15,145	1/1:4,8:12:18:221,18,0	1/1:3,9:14:15.52:205,16,0	1/1:3,16:18:24.08:348,24,0	0/0:12,0:16:32.12:0,32,310	1/1:7,12:21:34.56:406,35,0	1/1:3,14:18:21.03:270,21,0	1/1:0,11:13:29.58:385,30,0
chr10	10810807	.	GC	G	13657.66	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=1.171;DP=713;FS=1.254;HRun=3;HaplotypeScore=105.7767;InbreedingCoeff=0.9985;MQ=74.29;MQ0=1;MQRankSum=-2.504;QD=34.75;ReadPosRankSum=5.865;VQSLOD=4.4112;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,108,1498	1/1:1,6:7:18.06:223,18,0	0/0:22,0:19:32.57:0,33,552	0/0:38,0:33:58.46:0,58,885	0/0:10,0:10:30.10:0,30,427	0/0:16,0:15:45.15:0,45,645	0/0:29,0:29:87.28:0,87,1235	0/0:41,0:41:99:0,112,1590	0/0:34,0:34:96.32:0,96,1381	1/1:0,19:19:57.14:689,57,0	1/1:0,13:13:39.12:483,39,0	1/1:1,36:37:99:1263,102,0	1/1:0,22:22:56.74:706,57,0	1/1:0,24:24:72.23:892,72,0	1/1:0,49:49:99:1673,135,0	1/1:2,34:36:59.11:1184,59,0	1/1:0,28:28:84.26:1041,84,0	1/1:0,19:19:54.17:669,54,0	0/0:29,0:29:74.30:0,74,1076	0/0:14,0:14:41.73:0,42,570	0/0:27,0:27:48.16:0,48,691	1/1:0,8:8:24.08:297,24,0	1/1:1,18:19:48.15:595,48,0	1/1:0,35:35:99:1227,99,0	0/0:15,0:15:45.15:0,45,648	1/1:0,26:26:78.25:967,78,0	1/1:0,29:29:81.25:1004,81,0	1/1:1,21:22:60.19:744,60,0
chr10	10810818	.	C	CCTCT	4259.85	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-2.577;DP=774;FS=1.472;HRun=0;HaplotypeScore=193.9518;InbreedingCoeff=0.9801;MQ=75.41;MQ0=1;MQRankSum=-2.900;QD=25.97;ReadPosRankSum=-1.951;VQSLOD=4.4808;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,33:51:68.72:1554,69,0	0/0:10,0:10:27.07:0,27,399	0/0:35,0:27:25.06:0,25,364	0/0:45,0:36:38.44:0,38,663	0/0:13,0:12:28.37:0,28,289	0/0:18,0:19:23.65:0,24,570	0/0:30,0:30:66.22:0,66,1084	1/1:19,12:33:13.83:749,14,0	0/0:31,0:33:81.20:0,81,1234	0/0:20,0:21:57.60:0,58,860	0/0:16,0:16:30.09:0,30,478	0/0:40,0:42:99:0,108,1633	0/0:21,0:22:45.04:0,45,702	0/0:26,0:26:60.20:0,60,999	0/0:50,0:50:99:0,126,2031	0/0:35,0:36:87.25:0,87,1337	0/0:29,0:29:65.92:0,66,1016	0/0:18,0:19:51.13:0,51,776	1/1:13,13:30:19.18:656,19,0	1/1:2,16:20:26.95:562,27,0	1/1:5,23:30:30.10:739,30,0	0/0:9,0:9:21.07:0,21,348	0/0:23,0:24:51.02:0,51,764	0/0:34,0:35:69.07:0,69,1081	0/0:14,0:14:10.08:0,10,331	0/0:29,0:29:63.17:0,63,925	0/0:35,0:35:75.08:0,75,1062	0/0:16,0:16:36.11:0,36,574
chr10	10811628	.	CAAA	C	8355.17	PASS	AB=1.000;AC=33;AF=0.589;AN=56;BaseQRankSum=-3.271;DP=611;FS=19.743;HRun=14;HaplotypeScore=103.0424;InbreedingCoeff=0.9387;MQ=73.86;MQ0=0;MQRankSum=-2.885;QD=23.40;ReadPosRankSum=7.512;VQSLOD=1.7560;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:37:46.66:0,47,622	1/1:1,9:10:24.05:280,24,0	0/1:14,0:13:0.20:0,0,79	0/0:14,0:13:8.39:0,8,104	0/0:12,0:30:64.07:0,64,874	0/0:16,0:18:39.07:0,39,579	0/0:14,0:14:24.08:0,24,420	0/0:21,0:37:78.16:0,78,985	0/0:21,0:24:54.13:0,54,865	1/1:5,15:20:45.11:526,45,0	1/1:4,16:21:40.61:487,41,0	1/1:6,24:31:63.10:716,63,0	1/1:5,22:27:54.08:631,54,0	1/1:7,17:24:41.97:491,42,0	1/1:6,28:35:64.67:769,65,0	1/1:4,27:31:72.16:842,72,0	1/1:0,11:12:27.01:298,27,0	1/1:3,5:8:14.99:175,15,0	0/0:5,0:15:42.13:0,42,628	0/0:5,0:24:63.19:0,63,865	0/0:12,0:22:21:0,21,288	1/1:2,14:16:36.05:421,36,0	1/1:6,18:24:45.04:526,45,0	1/1:4,24:28:59.95:699,60,0	0/0:8,0:19:32.11:0,32,447	1/1:3,22:26:69.11:764,69,0	1/1:4,21:25:53.03:627,53,0	1/1:0,4:5:7.56:102,8,0
chr10	10811852	.	A	AG	116.97	PASS	AB=0.873;AC=14;AF=0.259;AN=54;BaseQRankSum=2.945;DP=381;FS=12.488;HRun=0;HaplotypeScore=63.6523;InbreedingCoeff=0.5645;MQ=41.32;MQ0=33;MQRankSum=-1.064;QD=1.83;ReadPosRankSum=0.719;VQSLOD=0.4747;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:30:76.24:0,76,519	1/1:5,0:5:1.18:2,1,0	0/0:35,0:8:17.36:0,17,104	0/0:25,0:5:8.82:0,9,92	0/0:24,0:22:28.55:0,29,193	0/0:16,0:15:34.52:0,35,290	0/0:19,0:19:46.20:0,46,406	0/0:29,0:26:49.26:0,49,363	0/0:26,0:26:59.44:0,59,489	1/1:1,3:4:6.99:42,7,0	0/1:10,3:12:0.57:41,0,1	0/0:3,3:4:0:0,0,0	0/1:13,1:11:0.89:1,0,15	0/0:6,4:7:0:0,0,0	0/0:8,0:7:3.05:0,3,15	1/1:9,0:9:1.78:5,2,0	./.	1/1:1,4:4:3.01:31,3,0	0/0:25,0:24:55.19:0,55,402	0/0:15,0:15:32.46:0,32,214	0/0:5,0:5:8.78:0,9,63	0/0:3,0:3:4.74:0,5,23	0/0:5,4:8:2.92:0,3,18	0/0:2,0:2:2.80:0,3,13	0/0:19,0:18:33.53:0,34,218	1/1:2,5:6:12.35:101,12,0	1/1:7,0:7:6.95:30,7,0	0/0:3,0:2:0:0,0,0
chr10	10811858	.	A	AAAGAG	4485.02	PASS	AB=1.000;AC=45;AF=0.804;AN=56;BaseQRankSum=-1.440;DP=488;FS=7.520;HRun=0;HaplotypeScore=140.1971;InbreedingCoeff=0.4818;MQ=48.14;MQ0=32;MQRankSum=-4.968;QD=11.99;ReadPosRankSum=-4.625;VQSLOD=1.5903;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:29:31.21:451,31,0	0/1:5,0:5:0:0,0,0	0/0:43,0:14:8.37:0,8,186	0/0:32,0:9:4.11:0,4,115	1/1:9,13:23:1.01:242,1,0	0/0:16,0:17:21.67:0,22,235	0/0:20,0:21:7.99:0,8,427	1/1:30,0:27:41.25:486,41,0	0/1:24,0:25:15.46:15,0,380	1/1:13,0:13:26.64:428,27,0	1/1:13,0:13:6.47:57,6,0	1/1:16,0:14:17.95:215,18,0	1/1:18,0:14:2.78:65,3,0	1/1:11,0:8:2.90:16,3,0	1/1:13,0:12:6.02:96,6,0	1/1:14,0:14:2.43:30,2,0	1/1:8,0:6:8.92:92,9,0	1/1:7,0:7:17.89:243,18,0	1/1:15,10:29:36.91:587,37,0	1/1:12,0:17:16.35:230,16,0	1/1:2,0:8:6.49:126,6,0	1/1:9,0:9:9.38:90,9,0	1/1:11,0:10:5.98:47,6,0	1/1:8,0:8:9.46:82,9,0	1/1:15,0:22:14.94:223,15,0	1/1:15,0:14:29.38:392,29,0	0/1:12,0:12:0.81:37,0,1	1/1:12,0:11:18:236,18,0
chr10	10811859	.	AG	A	858.74	PASS	AB=0.940;AC=11;AF=0.196;AN=56;BaseQRankSum=-3.221;DP=462;FS=0.000;HRun=1;HaplotypeScore=76.5321;InbreedingCoeff=0.3348;MQ=49.20;MQ0=32;MQRankSum=-0.303;QD=6.05;ReadPosRankSum=-0.657;VQSLOD=0.1205;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,1:26:11.12:0,11,118	0/1:5,0:5:0:0,0,0	0/0:45,0:15:20.70:0,21,187	0/0:33,0:10:19.88:0,20,155	0/0:19,0:17:16.65:0,17,115	1/1:15,1:15:27.89:241,28,0	1/1:20,0:20:46.17:349,46,0	0/1:24,2:23:40.19:40,0,152	1/1:20,3:23:43.95:343,44,0	0/0:13,0:13:32.84:0,33,229	0/0:13,0:13:2.30:0,2,22	0/0:16,0:14:5.91:0,6,41	0/0:19,0:15:4.72:0,5,30	0/0:12,0:9:3.85:0,4,27	0/0:13,0:12:8.91:0,9,72	0/0:13,0:13:4.80:0,5,30	0/0:8,0:6:2.57:0,3,17	0/0:7,0:7:14.62:0,15,93	0/1:23,0:22:5.73:6,0,255	0/0:11,2:13:10.14:0,10,73	0/0:9,0:9:8.89:0,9,64	0/1:9,0:9:7.56:8,0,38	0/0:10,0:9:2.97:0,3,25	0/0:8,0:8:5.26:0,5,45	0/1:14,6:19:23:23,0,46	0/0:15,0:14:40.80:0,41,284	0/0:12,0:12:9.04:0,9,49	0/0:14,0:13:23.90:0,24,185
chr10	10812809	.	G	GTC	1379.35	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=-4.968;DP=504;FS=6.472;HRun=0;HaplotypeScore=73.9179;InbreedingCoeff=0.8169;MQ=66.65;MQ0=1;MQRankSum=0.655;QD=20.90;ReadPosRankSum=1.890;VQSLOD=3.7484;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:95.93:0,96,1153	0/1:7,0:7:6.19:6,0,37	0/0:13,0:12:29.56:0,30,322	0/0:12,0:8:15.01:0,15,153	0/0:7,0:7:17.64:0,18,175	1/1:3,8:11:11.95:166,12,0	1/1:6,18:24:41.97:635,42,0	0/0:34,0:34:58.43:0,58,858	1/1:5,19:23:47.81:714,48,0	0/0:15,0:15:35.48:0,35,242	0/0:5,0:5:12.02:0,12,136	0/0:23,0:23:48.75:0,49,356	0/0:23,0:23:39.75:0,40,267	0/0:15,0:15:27.55:0,28,202	0/0:18,0:18:33.86:0,34,231	0/0:32,0:32:47.35:0,47,382	0/0:36,0:36:65.92:0,66,405	0/0:22,0:22:33.13:0,33,294	0/0:26,0:26:57.01:0,57,602	0/0:9,0:9:27.05:0,27,311	0/0:21,0:21:51.08:0,51,622	0/0:5,0:5:11.10:0,11,74	0/0:8,0:8:15.64:0,16,122	0/0:21,0:21:28.45:0,28,208	0/0:6,0:6:15.04:0,15,189	0/0:22,0:22:42.06:0,42,313	0/0:20,0:20:34.69:0,35,249	0/0:11,0:11:19.18:0,19,109
chr10	10815451	.	GAA	G	9406.76	PASS	AB=1.000;AC=39;AF=0.696;AN=56;BaseQRankSum=-4.722;DP=570;FS=2.584;HRun=11;HaplotypeScore=99.7998;InbreedingCoeff=0.9529;MQ=73.43;MQ0=3;MQRankSum=-2.107;QD=24.00;ReadPosRankSum=3.347;VQSLOD=4.8613;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:3,1:39:53.31:0,53,250	1/1:3,10:13:20.69:223,21,0	0/1:11,0:10:0.44:0,0,231	0/0:15,0:15:28.93:0,29,300	0/0:3,0:15:27.80:0,28,106	1/1:2,9:11:27.05:287,27,0	1/1:3,19:22:51.12:543,51,0	0/0:3,0:28:60.25:0,60,210	1/1:1,15:16:45.11:479,45,0	1/1:3,25:27:72.06:726,72,0	1/1:1,21:23:60.13:637,60,0	1/1:3,22:25:45.11:479,45,0	1/1:2,20:22:60.15:639,60,0	1/1:4,15:19:39.09:415,39,0	1/1:1,25:26:69.17:734,69,0	1/1:4,21:24:32.30:529,32,0	1/1:4,23:27:57.12:607,57,0	1/1:1,21:23:48.07:566,48,0	0/0:3,0:15:32.42:0,32,113	0/0:2,0:26:57.39:0,57,197	0/0:4,0:19:32.32:0,32,111	1/1:4,15:19:39.07:415,39,0	1/1:0,13:13:36.09:381,36,0	1/1:1,14:15:36.09:383,36,0	0/0:2,1:21:16:0,16,122	1/1:3,16:19:48.10:502,48,0	1/1:4,18:21:45.07:479,45,0	1/1:0,13:13:36.09:383,36,0
chr10	10819093	.	GT	G	594.17	PASS	AB=0.828;AC=7;AF=0.125;AN=56;BaseQRankSum=7.707;DP=488;FS=6.029;HRun=11;HaplotypeScore=48.5354;InbreedingCoeff=0.4760;MQ=65.93;MQ0=2;MQRankSum=0.442;QD=8.87;ReadPosRankSum=1.513;VQSLOD=1.8298;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,2:29:13.86:0,14,551	0/1:5,2:7:6.61:7,0,134	0/0:10,0:8:14.99:0,15,132	0/0:5,0:5:9.01:0,9,89	1/1:3,10:13:26.90:213,27,0	0/0:17,0:17:45.02:0,45,454	0/0:7,0:7:9.02:0,9,96	0/0:32,0:32:63.11:0,63,653	0/0:13,0:13:24.02:0,24,238	0/0:23,1:24:38.49:0,38,605	0/0:12,0:12:33.04:0,33,340	0/0:14,0:14:36.08:0,36,377	0/0:13,1:14:2.41:0,2,218	0/0:15,0:15:24.06:0,24,256	0/0:21,1:22:35.47:0,35,571	0/0:12,0:12:30.07:0,30,313	0/0:30,1:32:21.45:0,21,454	0/0:29,2:31:69.03:0,69,710	0/0:9,0:9:21.05:0,21,224	0/0:24,0:24:54.14:0,54,576	0/0:6,0:8:17.75:0,18,157	0/0:13,1:14:11.42:0,11,311	0/0:20,1:21:20.46:0,20,415	0/1:5,1:6:9.60:10,0,113	1/1:2,22:24:59.93:493,60,0	0/0:20,1:21:32.50:0,33,551	0/0:33,1:34:65.50:0,65,866	0/1:14,3:16:7.20:7,0,326
chr10	10819880	.	TC	T	1190.82	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=9.783;DP=810;FS=8.686;HRun=2;HaplotypeScore=135.6232;InbreedingCoeff=0.9986;MQ=82.12;MQ0=0;MQRankSum=-9.681;QD=15.67;ReadPosRankSum=-2.249;VQSLOD=2.3635;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:56:99:0,166,2448	0/0:9,0:9:24.07:0,24,342	0/0:25,0:25:72.23:0,72,1047	0/0:21,0:21:59.91:0,60,828	0/0:25,0:25:75.25:0,75,1124	0/0:30,0:30:87.29:0,87,1304	0/0:42,0:42:99:0,123,1799	1/1:9,16:25:48.08:474,48,0	0/0:37,0:37:99:0,111,1641	0/0:35,0:35:99:0,105,1539	0/0:23,0:23:69.22:0,69,1007	0/0:35,0:35:99:0,105,1533	0/0:26,0:26:78.24:0,78,1124	0/0:39,0:39:99:0,117,1711	0/0:52,0:52:99:0,154,2271	0/0:49,0:49:99:0,144,2137	0/0:32,0:32:90.23:0,90,1280	0/0:18,0:18:54.18:0,54,809	1/1:5,11:16:33.03:318,33,0	1/1:4,13:17:32.79:274,33,0	1/1:5,13:18:30.01:286,30,0	0/0:22,0:22:66.21:0,66,967	0/0:20,0:20:57.18:0,57,832	0/0:30,0:30:90.24:0,90,1285	0/0:35,0:35:99:0,105,1532	0/0:29,0:29:87.29:0,87,1283	0/0:36,0:36:99:0,105,1572	0/0:8,0:8:24.08:0,24,356
chr10	10819883	.	TGTGATGAGC	T	3482.10	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=10.979;DP=794;FS=11.973;HRun=0;HaplotypeScore=263.4970;InbreedingCoeff=0.9977;MQ=84.31;MQ0=0;MQRankSum=-10.924;QD=68.28;ReadPosRankSum=-1.223;VQSLOD=2.1325;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:56:99:0,163,7541	0/0:9,0:9:24.08:0,24,1009	0/0:25,0:25:66.23:0,66,2821	0/0:24,0:24:72.25:0,72,3028	0/0:25,0:25:75.26:0,75,3590	0/0:32,0:32:93.32:0,93,4348	0/0:40,0:40:99:0,120,5841	1/1:1,15:16:45.15:1248,45,0	0/0:37,0:37:99:0,108,5198	0/0:37,0:37:99:0,105,4974	0/0:23,0:23:69.24:0,69,3032	0/0:36,0:36:99:0,99,4729	0/0:25,0:25:75.26:0,75,3611	0/0:40,0:40:99:0,120,5295	0/0:50,0:50:99:0,151,7037	0/0:48,0:48:99:0,138,6387	0/0:30,0:30:87.30:0,87,4074	0/0:19,0:19:57.20:0,57,2795	1/1:1,9:10:27.09:742,27,0	1/1:0,13:13:30.10:791,30,0	1/1:2,10:12:30.09:702,30,0	0/0:24,0:24:72.23:0,72,3228	0/0:19,0:19:54.19:0,54,2562	0/0:30,0:30:84.29:0,84,4077	0/0:36,0:36:99:0,108,5100	0/0:32,0:32:96.33:0,96,4647	0/0:38,0:38:99:0,108,5126	0/0:8,0:8:21.07:0,21,912
chr10	10825002	.	CCT	C	201.50	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=2.368;DP=219;FS=8.087;HRun=0;HaplotypeScore=38.0947;InbreedingCoeff=0.3294;MQ=86.79;MQ0=1;MQRankSum=-1.519;QD=9.16;ReadPosRankSum=0.793;VQSLOD=1.8569;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:17:36.32:294,36,0	0/0:3,0:3:5.99:0,6,50	0/0:19,0:14:23.39:0,23,219	0/0:12,0:10:14.50:0,15,113	0/0:4,0:4:11.97:0,12,95	0/0:12,0:12:25.35:0,25,208	0/0:18,0:18:16.02:0,16,202	0/0:8,1:9:20.99:0,21,189	0/0:5,0:5:14.94:0,15,117	0/0:5,0:5:11.81:0,12,99	0/0:4,0:4:2.98:0,3,21	0/0:8,0:8:4.81:0,5,121	0/1:5,0:5:7.74:8,0,84	0/0:6,0:6:10.65:0,11,82	0/0:7,1:8:15:0,15,146	0/0:3,0:3:5.85:0,6,35	0/0:8,0:8:17.84:0,18,136	0/0:9,0:9:23.75:0,24,177	0/0:3,0:3:5.94:0,6,46	0/0:7,1:8:8.09:0,8,71	0/0:14,0:13:20.52:0,21,174	0/0:6,0:6:11.98:0,12,99	0/0:5,1:6:8.87:0,9,67	0/0:5,0:5:9.46:0,9,85	0/0:6,0:6:11.48:0,11,84	0/0:7,0:7:14.71:0,15,128	0/0:7,0:7:20.98:0,21,182	0/0:2,0:2:6:0,6,59
chr10	10825003	.	CT	C	192.41	PASS	AB=0.929;AC=4;AF=0.071;AN=56;BaseQRankSum=1.550;DP=215;FS=9.932;HRun=1;HaplotypeScore=33.5751;InbreedingCoeff=0.2907;MQ=83.80;MQ0=1;MQRankSum=-1.176;QD=6.87;ReadPosRankSum=-0.371;VQSLOD=-0.5507;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:17:36.30:283,36,0	0/0:3,0:3:5.99:0,6,49	0/0:18,1:13:11.81:0,12,178	0/0:11,0:9:7.92:0,8,61	0/0:4,0:4:11.97:0,12,95	0/0:12,0:12:29.70:0,30,223	0/0:18,0:18:25.12:0,25,219	0/0:8,1:9:20.91:0,21,180	0/0:5,0:5:14.94:0,15,117	0/0:5,0:5:11.76:0,12,97	0/0:1,3:4:2.98:0,3,21	0/0:7,1:8:18.34:0,18,137	0/1:5,0:5:2.01:2,0,84	0/1:5,1:6:10.62:11,0,68	0/0:6,2:8:14.90:0,15,125	0/0:3,0:3:5.78:0,6,33	0/0:7,1:8:16.51:0,17,125	0/0:9,0:9:22.69:0,23,166	0/0:2,0:2:5.96:0,6,46	0/0:6,1:7:11.85:0,12,87	0/0:14,0:13:32.42:0,32,223	0/0:5,1:6:11.98:0,12,98	0/0:4,2:6:8.88:0,9,67	0/0:4,0:4:9.46:0,9,75	0/0:5,1:6:11.86:0,12,89	0/0:6,1:7:14.98:0,15,128	0/0:7,0:7:20.96:0,21,170	0/0:2,0:2:5.99:0,6,47
chr10	10825067	.	CTCTT	C	2685.69	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=7.259;DP=310;FS=6.618;HRun=0;HaplotypeScore=60.2518;InbreedingCoeff=0.8146;MQ=87.84;MQ0=0;MQRankSum=-3.470;QD=33.16;ReadPosRankSum=0.399;VQSLOD=2.9004;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,29:30:75.26:1377,75,0	0/0:5,0:5:12.04:0,12,317	0/1:14,0:13:14.40:14,0,556	0/0:19,0:18:30.64:0,31,905	0/0:7,0:7:21.07:0,21,555	0/0:9,0:9:27.09:0,27,713	0/0:20,0:20:60.21:0,60,1583	1/1:1,8:9:24.08:423,24,0	0/0:6,0:6:15.05:0,15,396	0/0:8,0:8:24.08:0,24,624	0/0:5,0:5:15.05:0,15,383	0/0:12,0:12:36.11:0,36,896	0/0:10,0:10:30.10:0,30,782	0/0:11,0:11:33.11:0,33,871	0/0:11,0:11:33.11:0,33,872	0/0:7,0:7:21.07:0,21,555	0/0:19,0:19:57.20:0,57,1472	0/0:19,0:19:54.19:0,54,1426	1/1:2,6:8:18.06:325,18,0	1/1:0,2:2:3.01:55,3,0	1/1:2,16:18:35.89:662,36,0	0/0:5,0:5:15.05:0,15,396	0/0:6,0:5:18.06:0,18,454	0/0:8,0:8:21.07:0,21,555	0/0:8,0:8:24.08:0,24,634	0/0:13,0:13:36.12:0,36,951	0/0:18,0:18:51.15:0,51,1238	0/0:3,0:3:9.03:0,9,238
chr10	10825681	.	AT	A	2035.24	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.187;DP=761;FS=0.000;HRun=2;HaplotypeScore=70.2025;InbreedingCoeff=0.9981;MQ=85.16;MQ0=0;MQRankSum=-1.282;QD=32.31;ReadPosRankSum=1.171;VQSLOD=3.5159;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,147,2183	0/0:9,0:9:27.09:0,27,404	0/0:17,0:17:33.69:0,34,634	0/0:32,0:32:93.17:0,93,1281	0/0:19,0:19:57.19:0,57,854	1/1:0,26:26:72.23:932,72,0	1/1:0,17:17:48.16:623,48,0	0/0:36,0:36:99:0,105,1556	1/1:2,18:20:48.16:623,48,0	0/0:26,0:26:78.26:0,78,1169	0/0:16,0:16:48.16:0,48,719	0/0:37,0:37:99:0,111,1645	0/0:42,0:42:99:0,126,1848	0/0:33,0:33:96.33:0,96,1439	0/0:34,0:34:99:0,99,1464	0/0:47,0:47:99:0,141,2092	0/0:29,0:29:84.24:0,84,1216	0/0:20,0:20:57.18:0,57,833	0/0:26,0:26:78.23:0,78,1110	0/0:23,0:23:69.23:0,69,1015	0/0:41,0:41:99:0,120,1758	0/0:24,0:24:66.22:0,66,987	0/0:15,0:15:42.14:0,42,619	0/0:31,0:31:93.32:0,93,1394	0/0:24,0:23:72.24:0,72,1060	0/0:37,0:37:99:0,108,1618	0/0:24,0:24:69.23:0,69,1032	0/0:7,0:7:21.07:0,21,315
chr10	10826355	.	GT	G	13288.12	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=20.100;DP=720;FS=5.444;HRun=1;HaplotypeScore=136.4612;InbreedingCoeff=0.9998;MQ=79.78;MQ0=0;MQRankSum=-6.315;QD=36.21;ReadPosRankSum=4.235;VQSLOD=4.2654;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,99,1570	1/1:0,11:11:30.10:390,30,0	0/0:22,0:22:57.16:0,57,824	0/0:30,0:30:56.25:0,56,865	0/0:29,0:29:87.30:0,87,1386	0/0:21,0:21:63.21:0,63,999	0/0:35,0:35:99:0,105,1656	0/0:46,0:46:99:0,138,2164	0/0:28,0:28:84.29:0,84,1343	1/1:0,29:29:81.26:1040,81,0	1/1:0,18:18:45.15:584,45,0	1/1:5,23:28:75.24:966,75,0	1/1:1,22:23:66.21:855,66,0	1/1:0,25:25:72.23:934,72,0	1/1:0,37:37:99:1321,102,0	1/1:0,27:27:75.24:974,75,0	1/1:0,33:33:93.30:1207,93,0	1/1:0,10:10:30.10:390,30,0	0/0:23,0:23:69.21:0,69,1058	0/0:19,0:19:57.19:0,57,909	0/0:40,0:40:99:0,117,1871	1/1:0,29:29:84.27:1089,84,0	1/1:0,14:14:36.12:467,36,0	1/1:1,25:26:69.22:893,69,0	0/0:26,0:26:78.24:0,78,1221	1/1:0,23:23:69.22:896,69,0	1/1:0,22:22:63.20:817,63,0	1/1:0,12:12:36.12:467,36,0
chr10	10826523	.	GCCCAACCGAGT	G	13924.83	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=14.757;DP=628;FS=3.403;HRun=0;HaplotypeScore=189.5781;InbreedingCoeff=0.9575;MQ=79.82;MQ0=0;MQRankSum=-15.200;QD=41.57;ReadPosRankSum=4.822;VQSLOD=4.0893;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,111,5344	1/1:3,6:9:12.04:396,12,0	0/0:27,0:27:15.68:0,16,1193	0/0:17,0:17:30.10:0,30,1267	0/0:10,0:10:15.05:0,15,719	0/0:16,0:16:39.07:0,39,1641	0/0:34,0:34:81.22:0,81,3715	0/0:21,0:21:30.05:0,30,1242	0/0:22,0:22:48.15:0,48,2236	1/1:4,13:17:35.99:906,36,0	1/1:2,8:10:15.05:482,15,0	1/1:7,25:32:38.71:1289,39,0	1/1:9,21:30:29.91:992,30,0	1/1:8,26:34:51.18:1659,51,0	1/1:5,25:30:42.14:1389,42,0	1/1:3,20:23:42.14:1389,42,0	1/1:8,21:29:21.07:633,21,0	1/1:4,21:25:30.10:993,30,0	0/0:17,0:17:36.08:0,36,1744	0/0:18,0:18:39.09:0,39,1903	0/0:47,0:47:99:0,126,6255	1/1:2,10:12:21.07:649,21,0	1/1:2,12:14:18.06:531,18,0	1/1:9,22:31:12.04:397,12,0	0/0:22,0:22:54.19:0,54,2777	1/1:2,19:21:51.06:1429,51,0	1/1:2,13:15:19.31:692,19,0	1/1:0,3:3:3.01:99,3,0
chr10	10830708	.	C	CCCAG	30637.27	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-14.089;DP=779;FS=2.485;HRun=0;HaplotypeScore=128.1918;InbreedingCoeff=0.9992;MQ=84.74;MQ0=0;MQRankSum=-8.365;QD=58.58;ReadPosRankSum=3.320;VQSLOD=6.6205;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:93.28:0,93,1666	1/1:3,14:18:42.14:1077,42,0	0/0:29,0:30:78.74:0,79,1438	0/0:26,0:26:66.18:0,66,1135	0/0:32,0:32:93.31:0,93,1705	1/1:6,18:27:54.10:1302,54,0	1/1:2,18:22:42.14:1119,42,0	0/0:32,0:32:87.28:0,87,1565	1/1:5,20:26:57.11:1396,57,0	1/1:7,36:44:99:3213,126,0	1/1:12,15:28:33.11:853,33,0	1/1:4,25:29:75.26:1956,75,0	1/1:4,27:31:78.27:2055,78,0	1/1:1,23:25:72.25:1896,72,0	1/1:6,36:42:99:2908,117,0	1/1:3,29:33:90.27:2315,90,0	1/1:1,24:25:47.81:1280,48,0	1/1:2,15:17:45.15:1200,45,0	0/0:24,0:24:72.21:0,72,1250	0/0:35,0:35:96.29:0,96,1700	0/0:18,0:18:54.19:0,54,1008	1/1:11,16:27:54.19:1399,54,0	1/1:9,14:24:29.73:756,30,0	1/1:3,19:22:51.18:1358,51,0	0/0:27,0:27:78.25:0,78,1395	1/1:13,29:45:99:2814,117,0	1/1:6,21:26:51.09:1240,51,0	1/1:2,8:10:21.04:501,21,0
chr10	10831265	.	TGCAC	T	17529.98	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=15.337;DP=812;FS=9.263;HRun=0;HaplotypeScore=140.7346;InbreedingCoeff=0.9756;MQ=66.65;MQ0=0;MQRankSum=1.729;QD=30.43;ReadPosRankSum=6.095;VQSLOD=4.1745;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:93.22:0,93,2115	1/1:2,9:11:18.06:305,18,0	0/0:18,0:16:6.32:0,6,204	0/0:18,0:19:17.85:0,18,434	1/1:2,14:16:30.10:509,30,0	1/1:3,16:19:39.13:661,39,0	1/1:7,33:40:72.18:1182,72,0	0/0:20,0:20:45.08:0,45,871	1/1:5,33:38:63.22:1065,63,0	1/1:4,27:31:81.24:1293,81,0	1/1:2,13:15:29.80:475,30,0	1/1:12,35:47:63.01:1018,63,0	1/1:7,21:28:42.14:712,42,0	1/1:2,33:35:63.15:1018,63,0	1/1:4,18:22:33.11:560,33,0	1/1:6,31:37:75.19:1239,75,0	1/1:11,28:39:42.21:945,42,0	1/1:3,26:29:54.18:916,54,0	0/0:21,0:21:57.19:0,57,1214	0/0:17,0:17:51.10:0,51,1054	0/0:101,0:101:99:0,247,5607	1/1:4,19:23:51.14:852,51,0	1/1:5,19:24:32.91:557,33,0	1/1:8,37:45:81.28:1355,81,0	1/1:0,24:24:54.18:912,54,0	1/1:7,23:30:66.15:990,66,0	1/1:1,17:18:42.14:711,42,0	1/1:0,5:5:15.05:254,15,0
chr10	10832269	.	CA	C	508.62	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=7.623;DP=534;FS=8.690;HRun=21;HaplotypeScore=96.7885;InbreedingCoeff=0.8641;MQ=68.00;MQ0=12;MQRankSum=1.443;QD=5.19;ReadPosRankSum=3.502;VQSLOD=0.3224;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:38.18:0,38,195	0/0:9,0:9:13.95:0,14,59	0/0:48,0:12:4.96:0,5,19	0/0:26,0:10:2.28:0,2,18	1/1:11,0:19:9.15:33,9,0	1/1:3,9:12:25.22:121,25,0	1/1:7,15:22:42.13:202,42,0	0/0:27,2:29:27.56:0,28,196	1/1:4,23:27:58.97:283,59,0	0/0:16,0:16:22.90:0,23,90	0/0:16,0:16:32.33:0,32,134	0/0:11,0:13:21.58:0,22,90	0/0:12,0:12:7.97:0,8,33	0/0:14,0:14:16.54:0,17,76	0/0:17,0:17:24.16:0,24,99	0/0:15,0:15:20.27:0,20,88	0/0:23,0:24:37.95:0,38,159	0/0:19,0:21:32.57:0,33,140	0/0:15,0:16:18.59:0,19,95	0/0:15,0:15:12.54:0,13,46	0/0:13,1:14:12.34:0,12,77	0/0:16,0:17:26.81:0,27,110	0/0:20,0:20:36.76:0,37,142	0/0:16,0:16:22.56:0,23,101	1/1:13,0:18:10.75:36,11,0	0/0:21,0:20:25.68:0,26,97	0/0:13,0:13:19.16:0,19,86	0/0:12,0:12:16.40:0,16,74
chr10	10832275	.	A	AAAC	2530.82	PASS	AB=0.979;AC=30;AF=0.536;AN=56;BaseQRankSum=-3.744;DP=561;FS=39.487;HRun=0;HaplotypeScore=106.6292;InbreedingCoeff=0.6284;MQ=66.98;MQ0=13;MQRankSum=3.382;QD=8.91;ReadPosRankSum=4.680;VQSLOD=1.5301;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:27:0.88:1,0,284	1/1:8,0:8:0.14:90,0,0	0/0:56,0:12:5.91:0,6,123	0/0:36,0:12:12.29:0,12,108	0/0:19,0:19:47.55:0,48,437	0/0:12,0:12:6.80:0,7,127	0/0:23,0:23:9.83:0,10,167	0/0:30,0:30:58.33:0,58,667	0/0:28,0:28:36.51:0,37,293	1/1:17,1:18:10.57:239,11,0	1/1:17,0:16:37.80:302,38,0	1/1:15,0:15:14.67:120,15,0	0/1:12,0:12:5.49:49,0,5	1/1:16,0:16:6.10:83,6,0	1/1:15,0:15:25.91:184,26,0	1/1:15,0:15:2.85:128,3,0	1/1:21,2:22:23.15:304,23,0	1/1:22,0:20:2.67:123,3,0	0/0:21,0:21:45.46:0,45,445	0/0:16,0:16:36.30:0,36,346	0/0:19,0:19:34.96:0,35,440	1/1:14,1:15:15.70:218,16,0	1/1:19,1:20:8.20:203,8,0	1/1:17,0:16:2.95:113,3,0	0/0:17,0:17:47.26:0,47,393	1/1:16,2:17:30.11:300,30,0	0/1:15,0:15:2.10:140,0,2	0/1:10,1:11:4.13:127,0,4
chr10	10832276	.	A	AAC	4634.76	PASS	AB=0.563;AC=30;AF=0.536;AN=56;BaseQRankSum=-9.603;DP=575;FS=15.773;HRun=0;HaplotypeScore=97.5970;InbreedingCoeff=0.7979;MQ=68.22;MQ0=14;MQRankSum=2.992;QD=17.76;ReadPosRankSum=5.258;VQSLOD=3.4225;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:43.01:0,43,354	1/1:3,4:8:0.51:133,1,0	0/0:60,0:15:6.33:0,6,125	0/0:38,0:13:12.78:0,13,110	0/0:19,0:19:47.67:0,48,411	0/0:12,0:12:17.56:0,18,205	0/0:24,0:24:39.09:0,39,315	0/0:31,0:31:84.04:0,84,820	0/0:28,0:28:66.90:0,67,492	1/1:5,12:18:22.07:362,22,0	1/1:1,16:16:43.69:488,44,0	1/1:4,10:14:23.26:257,23,0	0/1:3,8:12:5.36:48,0,5	1/1:3,9:16:6.17:160,6,0	1/1:1,14:15:26.82:344,27,0	1/1:3,10:15:4.16:248,4,0	1/1:8,14:22:26.66:455,27,0	1/1:8,12:19:15.55:261,16,0	0/0:22,0:22:50:0,50,475	0/0:16,0:16:40.79:0,41,370	0/0:20,0:20:56.71:0,57,555	1/1:4,11:15:29.14:351,29,0	1/1:11,11:23:23.93:362,24,0	1/1:5,11:17:15.23:262,15,0	0/0:17,0:17:47.75:0,48,397	1/1:4,11:19:47.32:475,47,0	0/1:3,11:15:0.83:245,0,1	1/1:2,9:11:5.46:183,5,0
chr10	10832277	.	A	AC	1790.33	PASS	AB=0.916;AC=24;AF=0.429;AN=56;BaseQRankSum=-3.515;DP=568;FS=29.817;HRun=0;HaplotypeScore=94.9089;InbreedingCoeff=0.4802;MQ=68.23;MQ0=14;MQRankSum=3.199;QD=7.02;ReadPosRankSum=7.123;VQSLOD=1.5997;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:70.65:0,71,504	0/1:6,2:8:2.32:84,0,2	0/0:60,0:15:11.27:0,11,155	0/0:38,0:13:0.38:0,0,114	0/0:18,0:18:47.63:0,48,377	0/0:12,0:12:25.60:0,26,182	0/0:24,0:24:44.40:0,44,304	0/0:32,0:32:87.43:0,87,870	0/0:28,0:28:72.69:0,73,445	1/1:14,2:16:27.37:179,27,0	1/1:17,0:16:23.60:210,24,0	1/1:12,1:13:0.36:83,0,0	0/1:11,1:12:5.97:27,0,6	1/1:16,0:16:5.46:49,5,0	1/1:14,1:15:25.48:142,25,0	0/1:15,1:16:1.17:97,0,1	1/1:20,2:21:14.67:180,15,0	0/1:17,3:18:0.95:158,0,1	0/0:22,0:22:62.75:0,63,606	0/0:16,0:16:44.28:0,44,410	0/0:20,0:20:57.03:0,57,592	1/1:10,2:12:15.20:169,15,0	0/1:17,6:23:3.13:272,0,3	0/1:18,0:17:2.60:79,0,3	0/0:17,0:17:47.80:0,48,394	0/1:21,0:20:33.24:121,0,33	0/1:15,0:15:29.74:61,0,30	1/1:11,0:11:13.16:68,13,0
chr10	10832958	.	G	GTATTTATGGAAGGTTT	2833.03	PASS	AB=0.779;AC=35;AF=0.921;AN=38;BaseQRankSum=-3.190;DP=57;FS=13.268;HRun=0;HaplotypeScore=29.5869;InbreedingCoeff=-0.1122;MQ=132.00;MQ0=1;MQRankSum=-2.945;QD=56.66;ReadPosRankSum=1.063;VQSLOD=0.9653;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	0/1:0,0:1:0:0,0,0	0/1:3,0:7:62.59:377,0,63	0/1:4,1:7:47.83:464,0,48	1/1:2,0:2:3:25,3,0	./.	1/1:1,0:1:3.01:94,3,0	./.	./.	1/1:1,0:1:3:25,3,0	1/1:3,0:3:6.01:114,6,0	1/1:3,0:3:9.03:236,9,0	1/1:2,0:2:6:118,6,0	1/1:0,0:1:3.01:145,3,0	1/1:1,0:1:3.01:91,3,0	1/1:1,0:1:3.01:91,3,0	1/1:2,0:2:2.97:20,3,0	./.	1/1:6,0:6:15.05:356,15,0	./.	1/1:0,0:1:3.01:99,3,0	1/1:3,0:3:6.01:72,6,0	./.	./.	1/1:2,0:2:6.02:252,6,0	1/1:3,0:3:9.03:255,9,0	1/1:2,0:2:3.01:92,3,0	./.
chr10	10833828	.	CTACTACTACTACTACCAT	C	420.88	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=2.556;DP=835;FS=8.102;HRun=0;HaplotypeScore=404.0697;InbreedingCoeff=0.9022;MQ=54.91;MQ0=3;MQRankSum=-5.007;QD=13.15;ReadPosRankSum=-2.070;VQSLOD=0.2038;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:69.11:0,69,3108	0/0:12,0:12:35.86:0,36,1825	0/0:43,0:28:47.14:0,47,1172	0/0:30,0:21:44.90:0,45,912	1/1:6,7:13:3.11:8,3,0	0/0:37,0:37:81.28:0,81,5232	0/0:35,0:35:78.25:0,78,3499	0/0:34,0:33:66.20:0,66,2232	0/0:43,0:43:93.31:0,93,5116	0/0:35,0:34:81.27:0,81,4120	0/0:7,0:7:18.06:0,18,1035	0/0:56,0:56:99:0,135,6829	0/0:33,0:33:83.42:0,83,4099	0/0:33,0:33:78.25:0,78,3946	0/0:40,0:40:81.25:0,81,4825	0/0:43,0:43:99:0,108,6401	0/0:26,0:26:69.21:0,69,3870	0/0:19,0:19:48.12:0,48,2774	0/0:14,0:12:21.07:0,21,889	0/0:24,0:24:51.60:0,52,2884	0/0:64,0:64:99:0,123,5715	0/0:11,0:11:24.08:0,24,1694	0/0:19,0:19:42.14:0,42,2136	0/0:34,0:34:45.40:0,45,4609	1/1:19,0:18:31.07:515,31,0	0/0:30,0:30:66.22:0,66,3541	0/0:29,0:29:65.94:0,66,3189	0/0:24,0:24:66.14:0,66,3543
chr10	10833846	.	T	TGC	74.21	PASS	AB=0.733;AC=2;AF=0.036;AN=56;BaseQRankSum=4.308;DP=818;FS=12.522;HRun=0;HaplotypeScore=152.5308;InbreedingCoeff=0.5920;MQ=56.40;MQ0=0;MQRankSum=-1.582;QD=2.18;ReadPosRankSum=-0.845;VQSLOD=1.2919;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:76.59:0,77,1432	0/0:16,0:16:45.11:0,45,687	0/0:33,0:22:60.15:0,60,914	0/0:33,0:25:72.04:0,72,1064	0/1:9,3:12:0:0,0,0	0/0:34,0:34:99:0,99,1585	0/0:33,0:33:90.28:0,90,1416	0/0:34,0:33:99:0,99,1569	0/0:38,0:38:99:0,105,1673	0/0:41,0:41:99:0,120,1956	0/0:10,0:10:30.09:0,30,461	0/0:50,0:51:99:0,150,2417	0/0:33,0:33:96.32:0,96,1538	0/0:32,0:32:87.29:0,87,1393	0/0:45,0:45:99:0,111,1785	0/0:41,0:41:99:0,123,1924	0/0:26,0:26:75.23:0,75,1186	0/0:19,0:19:51.11:0,51,779	0/0:10,0:10:30.09:0,30,466	0/0:22,0:22:63.15:0,63,996	0/0:56,0:56:99:0,132,2101	0/0:11,0:11:30.57:0,31,489	0/0:16,0:16:48.16:0,48,783	0/0:34,0:34:98.14:0,98,1571	0/1:11,11:21:1.59:148,0,2	0/0:25,0:25:72.24:0,72,1143	0/0:26,0:25:69.22:0,69,1100	0/0:29,0:29:84.25:0,84,1319
chr10	10834445	.	AT	A	7703.30	PASS	AB=1.000;AC=39;AF=0.696;AN=56;BaseQRankSum=6.401;DP=597;FS=0.772;HRun=11;HaplotypeScore=72.9596;InbreedingCoeff=0.8601;MQ=74.88;MQ0=0;MQRankSum=-0.281;QD=18.21;ReadPosRankSum=1.911;VQSLOD=5.8796;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:18:34.12:0,34,171	1/1:0,7:7:17.98:148,18,0	0/1:32,0:19:22.70:23,0,159	0/0:21,0:16:6.27:0,6,50	0/0:18,0:20:56.81:0,57,572	1/1:5,26:31:74.90:616,75,0	1/1:1,21:22:60.40:493,60,0	0/0:34,1:35:41.50:0,42,635	1/1:3,17:20:41.94:345,42,0	1/1:5,15:20:44.92:369,45,0	1/1:3,19:22:53.93:443,54,0	1/1:4,20:24:56.92:468,57,0	1/1:3,13:16:0.96:214,1,0	1/1:3,20:23:62.93:517,63,0	1/1:0,22:22:62.93:517,63,0	1/1:1,14:15:32.95:271,33,0	1/1:1,28:29:77.91:640,78,0	1/1:6,19:26:16.11:404,16,0	0/0:20,0:21:45.70:0,46,484	0/0:24,0:25:66:0,66,686	0/0:13,0:13:36.09:0,36,384	1/1:1,18:19:47.94:394,48,0	1/1:0,22:22:50.60:418,51,0	1/1:3,13:16:32.95:271,33,0	0/0:18,0:20:56.80:0,57,564	1/1:3,19:22:56.92:468,57,0	1/1:4,16:21:47.89:388,48,0	1/1:2,12:14:35.96:296,36,0
chr10	10835905	.	TTG	T	5584.06	PASS	AB=0.954;AC=12;AF=0.214;AN=56;BaseQRankSum=13.752;DP=1137;FS=3.563;HRun=0;HaplotypeScore=140.5477;InbreedingCoeff=0.8205;MQ=60.80;MQ0=12;MQRankSum=2.246;QD=17.56;ReadPosRankSum=0.904;VQSLOD=4.6323;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:55,1:56:84.45:0,84,1783	0/1:12,1:13:6.31:6,0,400	0/0:45,0:23:20.11:0,20,348	0/1:48,1:28:7.06:7,0,351	1/1:7,27:33:66.20:801,66,0	0/0:22,0:22:42.38:0,42,941	0/0:31,1:32:44.87:0,45,1209	1/1:15,23:38:68.98:786,69,0	0/0:45,0:45:99:0,111,1740	0/0:64,2:66:87.95:0,88,2310	0/0:11,0:11:30.09:0,30,459	0/0:66,3:69:89.71:0,90,2364	0/0:49,0:50:99:0,123,1955	0/0:39,0:39:99:0,102,1601	0/0:39,0:39:92.06:0,92,1491	0/0:53,0:53:99:0,111,2095	0/0:39,0:39:92.51:0,93,1400	0/0:34,0:34:84.18:0,84,1258	0/0:9,0:16:37.38:0,37,344	1/1:11,21:32:54.08:622,54,0	1/1:22,86:108:99:2452,204,0	0/0:32,1:33:50.87:0,51,1279	0/0:32,0:32:78.25:0,78,1233	0/0:30,0:30:55.14:0,55,1120	1/1:8,35:41:75.23:910,75,0	0/0:46,0:47:85.16:0,85,1447	0/0:35,1:35:65.97:0,66,1520	0/0:24,0:24:60.20:0,60,968
chr10	10836315	.	T	TGC	3919.21	PASS	AB=1.000;AC=22;AF=0.393;AN=56;BaseQRankSum=11.175;DP=833;FS=6.328;HRun=0;HaplotypeScore=148.5888;InbreedingCoeff=0.8461;MQ=62.98;MQ0=1;MQRankSum=2.462;QD=10.26;ReadPosRankSum=-1.565;VQSLOD=2.9125;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:40,0:40:7.93:51,8,0	0/0:10,0:10:24.02:0,24,264	0/1:14,0:10:1.22:1,0,5	0/0:13,0:9:2.80:0,3,14	1/1:8,12:21:17.90:292,18,0	1/1:27,0:27:33.10:395,33,0	1/1:43,1:43:13.10:486,13,0	1/1:19,0:18:17.85:204,18,0	1/1:33,0:33:24.07:274,24,0	0/0:48,0:48:97.78:0,98,1098	0/0:11,0:11:26.96:0,27,271	0/0:40,0:40:63.06:0,63,690	0/0:21,0:21:39:0,39,442	0/0:25,0:25:45.08:0,45,503	0/0:19,0:19:33.01:0,33,339	0/1:22,0:22:0.98:1,0,432	0/0:38,0:38:75.91:0,76,892	0/0:51,0:51:99:0,129,1495	1/1:22,0:21:29.93:298,30,0	1/1:17,0:17:9.03:104,9,0	1/1:92,0:92:87.53:1084,88,0	0/0:25,0:25:54.05:0,54,563	0/0:27,0:27:54.10:0,54,602	0/0:44,0:44:87.07:0,87,931	1/1:10,21:31:3.64:727,4,0	0/0:52,0:52:99:0,111,1191	0/0:8,0:8:24.04:0,24,269	0/0:19,0:19:26.81:0,27,285
chr10	10836329	.	C	CGCGT	6320.48	PASS	AB=1.000;AC=20;AF=0.357;AN=56;BaseQRankSum=2.893;DP=749;FS=2.076;HRun=0;HaplotypeScore=141.5362;InbreedingCoeff=0.6992;MQ=58.76;MQ0=11;MQRankSum=1.529;QD=18.81;ReadPosRankSum=1.158;VQSLOD=4.8875;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,1:40:14.39:169,14,0	0/0:13,0:13:32.60:0,33,478	0/1:8,0:2:0.98:1,0,9	0/0:6,0:2:2.80:0,3,13	0/1:22,0:22:41.14:41,0,83	1/1:2,21:24:33.17:844,33,0	1/1:4,40:48:28.78:1132,29,0	1/1:15,0:14:32.84:411,33,0	1/1:2,19:23:24.08:661,24,0	0/0:42,0:44:99:0,123,1812	0/0:9,0:10:26.98:0,27,387	0/0:32,0:32:89.81:0,90,1197	0/0:20,0:19:53.96:0,54,784	0/0:27,0:26:68.32:0,68,898	0/0:12,0:14:36.06:0,36,523	0/1:23,0:23:6.97:7,0,764	0/0:39,0:40:97:0,97,1486	0/0:51,0:51:99:0,147,2417	1/1:7,13:16:47.83:690,48,0	1/1:1,11:12:9.01:249,9,0	1/1:54,13:67:69.35:1984,69,0	0/0:24,0:24:66.04:0,66,853	0/0:21,0:21:60.04:0,60,934	0/0:43,0:43:99:0,99,1501	0/1:29,0:29:99:131,0,139	0/0:45,0:46:99:0,105,1802	0/0:9,0:9:26.95:0,27,418	0/0:12,0:11:29.98:0,30,445
chr10	10837285	.	GATTTATTT	G	722.65	PASS	AC=8;AF=0.174;AN=46;BaseQRankSum=-5.269;DP=514;FS=0.000;HRun=0;HaplotypeScore=284.9808;InbreedingCoeff=0.8107;MQ=52.84;MQ0=3;MQRankSum=-0.471;QD=13.38;ReadPosRankSum=1.595;VQSLOD=2.1762;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:9,0:18:13.15:185,13,0	0/0:11,0:11:21.07:0,21,592	./.	./.	1/1:12,3:15:6.02:149,6,0	1/1:3,7:10:18.06:448,18,0	./.	0/0:37,0:37:33.08:0,33,576	./.	0/0:35,0:35:66.09:0,66,1537	0/0:22,0:23:26.56:0,27,641	0/0:20,0:20:24.08:0,24,652	0/0:18,0:18:27.06:0,27,689	0/0:25,0:25:27.54:0,28,631	0/0:21,0:21:45.13:0,45,1252	0/0:27,0:27:33.96:0,34,892	0/0:26,0:25:24.94:0,25,571	0/0:10,0:10:18.06:0,18,378	0/0:18,0:17:3.01:0,3,92	0/0:9,0:9:6.02:0,6,150	./.	0/0:30,0:30:58.66:0,59,1545	0/0:19,0:19:21.02:0,21,500	0/0:14,0:14:15.52:0,16,410	1/1:8,2:10:3.01:75,3,0	0/0:37,0:36:63.17:0,63,1591	0/0:32,0:32:37.01:0,37,912	0/0:12,0:12:12.04:0,12,294
chr10	10838001	.	GA	G	4266.05	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=10.517;DP=786;FS=1.206;HRun=2;HaplotypeScore=75.8850;InbreedingCoeff=0.9998;MQ=86.34;MQ0=0;MQRankSum=-1.119;QD=31.37;ReadPosRankSum=-4.799;VQSLOD=3.1765;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,163,2364	0/0:16,0:16:45.15:0,45,673	0/0:32,0:32:81.18:0,81,1117	0/0:20,0:20:56.86:0,57,706	0/0:27,0:27:75.23:0,75,1102	0/0:20,0:20:54.14:0,54,784	0/0:36,0:36:99:0,102,1506	1/1:1,21:22:63.19:802,63,0	0/0:36,0:36:99:0,108,1599	0/0:24,0:24:72.23:0,72,1046	0/0:15,0:15:45.13:0,45,652	0/0:35,0:35:99:0,102,1529	0/0:24,0:24:72.24:0,72,1058	0/0:24,0:24:72.23:0,72,1049	0/0:27,0:27:78.24:0,78,1129	0/0:32,0:32:96.28:0,96,1414	0/0:41,0:41:99:0,117,1711	0/0:17,0:17:51.16:0,51,744	1/1:0,17:17:51.17:662,51,0	1/1:1,24:25:57.05:698,57,0	1/1:2,70:72:99:2103,162,0	0/0:25,0:25:75.25:0,75,1123	0/0:24,0:24:72.22:0,72,1039	0/0:44,0:44:99:0,132,1930	0/0:18,0:18:54.18:0,54,809	0/0:30,0:30:90.30:0,90,1349	0/0:10,0:10:30.09:0,30,429	0/0:19,0:19:57.19:0,57,854
chr10	10838756	.	C	CT	7345.53	PASS	AB=0.609;AC=50;AF=0.893;AN=56;BaseQRankSum=-1.731;DP=555;FS=6.316;HRun=12;HaplotypeScore=91.8299;InbreedingCoeff=0.3922;MQ=66.21;MQ0=9;MQRankSum=-2.005;QD=14.02;ReadPosRankSum=0.404;VQSLOD=5.0128;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:15,17:33:3.10:483,3,0	1/1:3,9:12:11.17:187,11,0	0/0:18,0:15:0.72:0,1,79	0/0:13,0:7:6.99:0,7,32	1/1:3,0:13:21.04:110,21,0	1/1:7,0:21:42.69:218,43,0	1/1:6,1:14:22.85:127,23,0	1/1:19,1:34:68.10:377,68,0	1/1:5,0:21:22.94:122,23,0	1/1:15,10:27:48.93:451,49,0	0/1:6,8:15:36.06:133,0,36	1/1:6,16:21:30.05:292,30,0	1/1:5,7:11:12.02:117,12,0	1/1:11,11:22:46.59:426,47,0	1/1:3,15:18:26.12:406,26,0	1/1:4,12:17:8.02:215,8,0	1/1:6,16:23:35.01:486,35,0	1/1:10,25:34:22.28:534,22,0	1/1:14,1:20:40.83:244,41,0	1/1:11,0:17:19.63:129,20,0	1/1:6,0:10:11.36:57,11,0	1/1:6,11:17:26.88:247,27,0	1/1:2,10:13:8.01:226,8,0	1/1:8,17:26:53.89:503,54,0	1/1:8,0:15:34.08:194,34,0	1/1:3,15:19:47.72:425,48,0	1/1:8,18:26:23.02:377,23,0	0/1:5,11:15:5.72:260,0,6
chr10	10840288	.	GA	G	1898.60	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.660;DP=640;FS=1.652;HRun=5;HaplotypeScore=59.7180;InbreedingCoeff=0.9581;MQ=84.85;MQ0=0;MQRankSum=-2.041;QD=28.34;ReadPosRankSum=1.719;VQSLOD=3.8840;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,138,1884	0/0:5,0:5:14.99:0,15,173	0/0:24,0:24:60.10:0,60,754	0/0:24,0:23:63.16:0,63,801	0/0:23,0:23:60.17:0,60,781	1/1:1,19:20:48.14:544,48,0	1/1:1,18:19:54.15:612,54,0	0/0:31,0:31:81.26:0,81,1094	1/1:1,27:28:78.22:884,78,0	0/0:35,0:35:96.32:0,96,1307	0/0:14,0:14:33.11:0,33,448	0/0:24,0:24:63.21:0,63,862	0/0:15,0:15:45.15:0,45,613	0/0:19,0:19:57.18:0,57,763	0/0:35,0:35:99:0,99,1337	0/0:21,0:21:60.19:0,60,805	0/0:25,0:25:72.20:0,72,964	0/0:25,0:25:72.24:0,72,985	0/0:22,0:22:63.21:0,63,856	0/0:24,0:24:63.20:0,63,845	0/0:28,0:28:84.27:0,84,1129	0/0:17,0:17:48.16:0,48,657	0/0:17,0:17:48.16:0,48,655	0/0:26,0:26:72.22:0,72,951	0/0:10,0:10:30.10:0,30,410	0/0:30,0:30:87.29:0,87,1187	0/0:29,0:29:78.25:0,78,1048	0/0:2,0:2:6.02:0,6,82
chr10	10840670	.	AG	A	2473.15	PASS	AB=0.568;AC=11;AF=0.196;AN=56;BaseQRankSum=3.493;DP=476;FS=15.059;HRun=2;HaplotypeScore=58.4969;InbreedingCoeff=0.8579;MQ=77.65;MQ0=34;MQRankSum=-0.023;QD=24.98;ReadPosRankSum=0.387;VQSLOD=2.0733;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:23:63.21:0,63,928	0/0:10,0:9:27.05:0,27,362	0/0:49,0:19:54.16:0,54,775	0/0:76,0:27:61.60:0,62,770	1/1:0,8:8:24.08:312,24,0	0/0:19,0:18:50.79:0,51,698	0/0:13,0:12:36.12:0,36,536	0/1:5,16:19:21.69:494,0,22	0/0:11,0:10:27.09:0,27,395	0/0:13,0:12:36.12:0,36,537	0/0:9,0:9:21.07:0,21,314	0/0:10,0:9:23.87:0,24,326	0/0:7,0:7:18.06:0,18,269	0/0:10,0:9:24.08:0,24,358	0/0:13,0:13:39.08:0,39,543	0/0:14,0:14:39.05:0,39,550	0/0:16,0:16:41.34:0,41,590	0/0:16,0:15:45.15:0,45,662	1/1:8,11:13:7:363,7,0	1/1:1,9:9:27.09:349,27,0	1/1:5,28:29:66.21:857,66,0	0/0:9,0:9:27.09:0,27,403	0/0:7,0:6:15.05:0,15,217	0/0:18,0:17:41.85:0,42,620	1/1:1,7:7:21.07:272,21,0	0/0:15,0:13:39.12:0,39,554	0/0:8,0:8:24.08:0,24,354	0/0:10,0:9:27.09:0,27,403
chr10	10842042	.	ACGGAGACAGGGG	A	262.06	PASS	AB=0.949;AC=5;AF=0.104;AN=48;BaseQRankSum=4.972;DP=956;FS=0.000;HRun=0;HaplotypeScore=82.2583;InbreedingCoeff=0.1586;MQ=27.52;MQ0=314;MQRankSum=-2.989;QD=3.24;ReadPosRankSum=-2.376;VQSLOD=0.9712;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:60,0:20:5.02:0,5,574	0/1:9,1:2:36.44:68,0,36	./.	0/0:18,0:1:2.99:0,3,23	./.	0/0:29,0:11:9.01:0,9,205	0/0:50,0:18:23.99:0,24,474	0/0:15,0:1:3:0,3,25	0/0:37,0:11:6.95:0,7,280	0/0:53,0:13:8.24:0,8,511	./.	0/0:36,0:18:20.19:0,20,557	0/0:17,0:7:8.90:0,9,384	./.	0/0:17,0:5:6.01:0,6,138	0/0:15,0:8:5.94:0,6,177	0/0:62,0:35:27.06:0,27,867	0/0:77,0:38:32.87:0,33,945	0/0:40,0:5:11.96:0,12,470	0/0:16,0:5:8.15:0,8,403	0/0:123,1:39:28.28:0,28,1055	1/1:20,2:10:2.80:89,3,0	0/1:18,0:6:0:0,0,0	0/0:68,0:21:26.32:0,26,878	0/1:29,2:19:31.77:204,0,32	0/0:39,0:14:24.05:0,24,913	0/0:27,0:11:19.30:0,19,544	0/0:14,0:1:3.01:0,3,188
chr10	10842078	.	ACGGAGACAGGGG	A	427.59	PASS	AB=0.916;AC=14;AF=0.389;AN=36;BaseQRankSum=2.187;DP=805;FS=0.000;HRun=0;HaplotypeScore=49.8903;InbreedingCoeff=0.1774;MQ=16.45;MQ0=520;MQRankSum=-1.343;QD=2.14;ReadPosRankSum=-0.614;VQSLOD=1.2823;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	1/1:9,0:3:6.27:34,6,0	./.	./.	./.	./.	./.	./.	./.	0/0:36,0:5:6.02:0,6,225	./.	0/1:25,4:8:12.98:65,0,13	0/0:16,0:4:5.06:0,5,28	./.	0/0:15,2:3:2.60:0,3,10	0/1:11,0:2:0:0,0,0	0/0:69,0:14:2.60:0,3,10	0/1:69,7:20:63.52:64,0,71	0/0:31,0:2:3.01:0,3,69	1/1:5,1:4:0.70:2,1,0	0/0:107,0:11:2.97:0,3,20	1/1:15,0:5:3.01:47,3,0	1/1:13,0:2:3.01:36,3,0	0/0:77,0:9:5.99:0,6,162	0/1:17,3:11:86.15:175,0,86	0/0:31,0:4:6.01:0,6,130	1/1:19,1:5:5.94:118,6,0	0/0:11,0:1:2.90:0,3,16
chr10	10842114	.	ACGGAGACAGGGG	A	745.91	PASS	AB=0.972;AC=21;AF=0.750;AN=28;BaseQRankSum=-0.493;DP=748;FS=0.000;HRun=0;HaplotypeScore=22.6291;InbreedingCoeff=0.1122;MQ=6.71;MQ0=657;MQRankSum=0.000;QD=2.30;ReadPosRankSum=0.887;VQSLOD=1.0007;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	0/1:10,1:3:8.89:163,0,9	./.	./.	./.	./.	./.	./.	./.	1/1:23,0:2:2.99:23,3,0	0/0:4,0:1:3.01:0,3,60	1/1:38,1:1:2.74:12,3,0	1/1:7,3:1:3.01:115,3,0	./.	1/1:18,1:2:3.01:115,3,0	./.	1/1:66,4:3:3.01:115,3,0	0/1:74,0:1:0:0,0,0	./.	1/1:3,5:6:5.97:72,6,0	./.	./.	0/0:8,0:1:0:0,0,0	./.	0/1:23,0:6:2.25:2,0,138	1/1:25,0:2:2.98:21,3,0	1/1:16,0:1:3.01:98,3,0	1/1:6,1:1:3.01:97,3,0
chr10	10842705	.	CCGACAGGGACAG	C	33.66	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.811;DP=573;FS=14.369;HRun=0;HaplotypeScore=184.1391;InbreedingCoeff=0.8690;MQ=65.43;MQ0=6;MQRankSum=-0.734;QD=1.46;ReadPosRankSum=-0.708;VQSLOD=1.8181;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:0,23:23:11.96:119,12,0	0/0:7,0:7:21.01:0,21,811	0/0:20,0:17:8.73:0,9,421	0/0:32,0:17:20.58:0,21,660	0/0:7,0:7:14.82:0,15,270	0/0:15,0:15:38.83:0,39,1407	0/0:35,0:35:99:0,99,4244	0/0:29,0:29:83.93:0,84,2227	0/0:22,0:22:59.52:0,60,2063	0/0:29,0:29:86.91:0,87,2681	0/0:7,0:7:18.05:0,18,620	0/0:29,0:28:77.84:0,78,3715	0/0:7,0:7:21:0,21,623	0/0:25,0:25:62.21:0,62,2624	0/0:25,0:25:65.86:0,66,2511	0/0:24,0:24:61.21:0,61,2507	0/0:26,0:26:72.04:0,72,2934	0/0:20,0:19:50.92:0,51,1536	0/0:15,0:14:38.97:0,39,1109	0/0:8,0:8:23.29:0,23,470	0/0:71,0:69:99:0,189,7350	0/0:8,0:8:23.90:0,24,981	0/0:8,0:8:23.63:0,24,444	0/0:22,0:21:54.12:0,54,2246	0/0:23,0:23:60.73:0,61,2355	0/0:16,0:16:48.04:0,48,1556	0/0:13,0:13:36.11:0,36,1699	0/0:7,0:7:21.06:0,21,961
chr10	10844531	.	AACACACAC	A	11857.18	PASS	AB=0.702;AC=31;AF=0.554;AN=56;BaseQRankSum=1.856;DP=585;FS=79.851;HRun=0;HaplotypeScore=152.7656;InbreedingCoeff=0.7550;MQ=58.24;MQ0=27;MQRankSum=-8.825;QD=39.26;ReadPosRankSum=4.111;VQSLOD=1.4388;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:47:99:0,111,3749	1/1:0,8:8:9.03:236,9,0	0/0:52,0:26:36.98:0,37,1021	0/1:33,0:17:7.45:7,0,330	0/0:6,0:21:18.72:0,19,430	0/0:6,0:18:33.11:0,33,1116	0/0:10,0:20:36.04:0,36,1054	0/0:16,0:26:54.17:0,54,1248	0/0:4,0:10:18.06:0,18,618	1/1:4,24:27:69.17:1489,69,0	1/1:2,12:14:33.07:744,33,0	1/1:5,14:20:36.12:920,36,0	1/1:3,8:11:21.07:531,21,0	1/1:3,15:18:27.09:707,27,0	1/1:3,8:13:24.08:576,24,0	1/1:3,9:12:21.07:550,21,0	1/1:7,25:32:39.04:1014,39,0	0/1:7,19:27:12.92:753,0,13	0/0:16,0:21:36.09:0,36,713	0/0:4,0:17:9.03:0,9,281	0/0:23,0:24:24.55:0,25,685	1/1:0,9:9:24.08:628,24,0	1/1:1,5:7:12.04:314,12,0	1/1:3,7:10:6.02:157,6,0	0/0:1,0:12:11.71:0,12,404	1/1:4,17:22:51.17:1220,51,0	1/1:6,18:23:51.18:1334,51,0	0/1:1,12:13:22.80:677,0,23
chr10	10845134	.	TTCTCTCTCTCTCTCTC	T	1919.79	PASS	AB=0.739;AC=7;AF=0.130;AN=54;BaseQRankSum=5.853;DP=667;FS=0.942;HRun=0;HaplotypeScore=234.7205;InbreedingCoeff=0.6735;MQ=52.68;MQ0=40;MQRankSum=-5.666;QD=19.39;ReadPosRankSum=2.609;VQSLOD=1.9868;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:22,1:33:78.96:256,0,79	0/0:16,0:21:6.49:0,6,398	./.	0/0:27,0:6:0:0,0,0	0/0:24,0:24:39.13:0,39,2488	1/1:17,2:22:18.06:678,18,0	1/1:17,5:23:15.05:638,15,0	0/0:41,0:40:32.32:0,32,1234	1/1:12,4:18:12.04:487,12,0	0/0:28,0:30:54.19:0,54,3272	0/0:15,0:15:9.50:0,10,670	0/0:18,0:23:18.06:0,18,1114	0/0:17,0:24:9.50:0,10,528	0/0:25,0:28:21.96:0,22,1075	0/0:18,0:20:7.85:0,8,322	0/0:21,0:23:18.95:0,19,909	0/0:14,0:16:15.04:0,15,777	0/0:12,0:11:18.06:0,18,1114	0/0:25,0:24:30.09:0,30,991	0/0:23,0:24:30.10:0,30,1323	0/0:30,0:37:45.15:0,45,2386	0/0:30,0:30:11.33:0,11,626	0/0:17,0:19:12.04:0,12,854	0/0:21,0:26:24.97:0,25,1149	0/0:17,0:17:18.05:0,18,893	0/0:28,0:30:54.13:0,54,2336	0/0:18,0:19:24.08:0,24,1407	0/0:8,0:7:1.25:0,1,3
chr10	10845848	.	A	AGT	4288.17	PASS	AB=0.752;AC=38;AF=0.731;AN=52;BaseQRankSum=-1.933;DP=623;FS=0.813;HRun=0;HaplotypeScore=99.8444;InbreedingCoeff=0.0259;MQ=68.09;MQ0=5;MQRankSum=0.203;QD=8.36;ReadPosRankSum=0.145;VQSLOD=4.5168;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:32,0:31:7.95:52,8,0	1/1:3,4:7:12.04:179,12,0	./.	./.	0/0:18,0:19:11.86:0,12,112	1/1:15,0:14:8.99:74,9,0	1/1:27,0:27:8.57:72,9,0	0/0:28,0:28:5.94:0,6,51	1/1:22,0:22:5.99:50,6,0	0/1:25,1:27:26.08:139,0,26	1/1:17,7:25:15.05:222,15,0	1/1:9,4:13:11.78:146,12,0	1/1:15,13:29:42.13:603,42,0	1/1:9,15:26:6.75:478,7,0	0/1:9,14:25:16.86:329,0,17	0/1:11,10:24:99:362,0,122	0/1:27,5:31:35.53:308,0,36	1/1:6,6:13:15.05:224,15,0	1/1:21,0:21:11.85:82,12,0	1/1:10,0:16:3:27,3,0	1/1:23,3:40:6.02:90,6,0	1/1:15,6:23:12.03:161,12,0	0/1:12,6:19:47.61:161,0,48	0/1:16,10:26:44.62:203,0,45	0/0:9,0:9:1.82:0,2,5	0/1:15,2:21:14.84:132,0,15	0/1:12,8:20:20.12:106,0,20	1/1:3,4:7:6.02:90,6,0
chr10	10845853	.	G	GTGTGTGTGTA	1034.35	PASS	AB=1.000;AC=10;AF=0.179;AN=56;BaseQRankSum=3.742;DP=638;FS=1.666;HRun=0;HaplotypeScore=199.3646;InbreedingCoeff=0.4275;MQ=62.99;MQ0=6;MQRankSum=-4.930;QD=6.42;ReadPosRankSum=-1.449;VQSLOD=2.5042;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:32:34.09:34,0,184	0/0:9,0:9:23.90:0,24,235	0/0:23,0:13:6.60:0,7,139	0/0:26,0:16:38.75:0,39,358	0/0:23,0:23:50.95:0,51,670	1/1:5,12:22:9.17:366,9,0	1/1:14,12:32:9.02:237,9,0	0/0:27,0:28:56.77:0,57,515	1/1:8,18:32:8.97:388,9,0	0/0:27,0:27:40.31:0,40,613	0/0:25,0:25:47.01:0,47,414	0/0:16,0:16:29.39:0,29,324	0/0:27,0:27:39.07:0,39,577	0/0:28,0:28:12.64:0,13,565	0/0:23,0:23:45.07:0,45,565	0/0:25,0:25:51:0,51,874	0/0:27,0:26:61.53:0,62,699	0/0:14,0:13:26.92:0,27,256	0/1:16,0:15:92.30:92,0,103	0/1:17,0:17:13.17:13,0,161	0/0:38,0:38:32.57:0,33,279	0/0:23,0:23:10.74:0,11,389	0/0:19,0:19:38.99:0,39,506	0/0:27,0:27:36.02:0,36,489	0/1:8,0:8:41.89:54,0,42	0/0:24,0:23:9.96:0,10,489	0/0:18,0:18:31.34:0,31,320	0/0:7,0:7:14.98:0,15,143
chr10	10846458	.	G	GA	4237.96	PASS	AB=1.000;AC=39;AF=0.696;AN=56;BaseQRankSum=3.251;DP=540;FS=11.510;HRun=12;HaplotypeScore=67.6645;InbreedingCoeff=0.8133;MQ=57.36;MQ0=31;MQRankSum=0.470;QD=12.32;ReadPosRankSum=1.476;VQSLOD=3.7447;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:41:80.56:0,81,572	1/1:1,1:3:3:29,3,0	0/1:36,0:5:0.07:6,0,0	0/0:37,0:12:5.94:0,6,71	0/0:25,0:25:41.19:0,41,322	1/1:5,1:14:17.24:101,17,0	1/1:3,3:18:27.55:147,28,0	0/0:25,0:25:29.31:0,29,300	1/1:5,0:9:18.40:100,18,0	1/1:5,9:14:8.20:227,8,0	1/1:5,8:13:18.86:165,19,0	1/1:4,6:10:1.59:154,2,0	1/1:4,3:7:11.98:108,12,0	1/1:5,9:14:16.80:255,17,0	1/1:1,17:18:33.05:321,33,0	1/1:3,8:11:15.02:146,15,0	1/1:28,18:47:59.43:657,59,0	1/1:5,12:19:20.71:175,21,0	0/0:23,0:23:47.05:0,47,335	0/0:21,0:23:42.53:0,43,305	0/0:10,0:10:20.80:0,21,153	1/1:2,16:18:42.69:374,43,0	1/1:3,9:12:11.60:113,12,0	1/1:4,13:17:24.04:234,24,0	0/0:11,0:12:18.73:0,19,120	1/1:6,14:20:35.46:307,35,0	1/1:12,14:26:0.25:443,0,0	1/1:2,13:14:18.03:175,18,0
chr10	10846941	.	T	TA	2701.61	PASS	AB=0.915;AC=17;AF=0.304;AN=56;BaseQRankSum=-7.857;DP=435;FS=0.427;HRun=11;HaplotypeScore=47.3245;InbreedingCoeff=0.7222;MQ=71.66;MQ0=0;MQRankSum=1.590;QD=15.89;ReadPosRankSum=-1.617;VQSLOD=3.4213;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,26:34:34.42:684,34,0	0/1:5,1:6:18.49:18,0,58	0/1:5,0:8:7.09:7,0,29	0/0:8,0:8:8.45:0,8,55	1/1:5,17:22:18.81:362,19,0	0/0:21,0:21:47.79:0,48,371	0/0:18,0:19:42.91:0,43,314	1/1:6,16:23:30.70:476,31,0	0/0:8,0:8:14.91:0,15,114	0/0:18,0:18:41.83:0,42,325	0/0:19,1:20:14.35:0,14,291	0/0:15,0:15:38.85:0,39,301	0/0:9,0:9:26.90:0,27,209	0/0:12,0:13:34.88:0,35,259	0/1:7,1:8:9.50:9,0,116	0/0:9,0:10:19.95:0,20,145	0/0:25,0:26:61.79:0,62,470	0/0:18,0:18:38.75:0,39,299	1/1:4,14:18:45.08:452,45,0	1/1:7,16:25:45.19:415,45,0	1/1:2,11:13:24.01:233,24,0	0/0:12,1:13:2.43:0,2,202	0/0:12,0:12:29.86:0,30,232	0/0:12,0:13:34.90:0,35,261	1/1:5,8:13:24.05:244,24,0	0/0:18,0:18:47.80:0,48,369	0/0:15,0:15:23.15:0,23,182	0/0:9,0:9:26.90:0,27,209
chr10	10847058	.	GACCAAAAA	G	359.15	PASS	AB=0.960;AC=13;AF=0.241;AN=54;BaseQRankSum=-5.896;DP=474;FS=1.834;HRun=0;HaplotypeScore=140.5124;InbreedingCoeff=0.1296;MQ=39.77;MQ0=7;MQRankSum=-0.179;QD=1.98;ReadPosRankSum=-0.158;VQSLOD=2.2176;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:64.75:0,65,1070	0/1:9,0:8:2.10:2,0,205	./.	0/0:4,0:1:1.25:0,1,3	0/0:24,0:22:41.35:0,41,663	0/0:12,0:12:19.17:0,19,443	0/0:16,0:17:13.47:0,13,491	0/0:19,0:19:12.82:0,13,263	0/0:13,0:13:20.88:0,21,349	0/0:25,0:24:34.92:0,35,719	0/1:18,0:19:14.87:15,0,376	1/1:6,7:13:12.77:183,13,0	1/1:8,0:9:15.31:161,15,0	0/1:7,9:16:2.78:42,0,3	0/0:10,0:9:2.83:0,3,278	0/1:20,0:16:18.75:19,0,428	0/1:26,0:24:12.55:13,0,565	0/0:15,0:11:17.75:0,18,370	0/1:23,0:23:12.19:12,0,315	0/0:14,0:16:32.56:0,33,398	0/1:7,0:5:11.08:11,0,97	0/0:14,0:14:12.48:0,12,312	0/1:17,0:16:26.86:27,0,348	0/0:11,0:10:11.75:0,12,238	0/0:14,0:14:25.39:0,25,351	0/0:25,0:25:21:0,21,849	0/1:22,0:21:28.22:28,0,475	0/0:42,0:37:29.30:0,29,653
chr10	10848791	.	T	TATAC	1269.13	PASS	AC=6;AF=0.111;AN=54;BaseQRankSum=-0.398;DP=525;FS=1.626;HRun=0;HaplotypeScore=140.3014;InbreedingCoeff=0.9130;MQ=57.65;MQ0=2;MQRankSum=-1.365;QD=21.15;ReadPosRankSum=0.139;VQSLOD=3.3829;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:75.03:0,75,1225	0/0:3,0:3:6.02:0,6,101	0/0:11,0:2:5.99:0,6,71	./.	0/0:31,0:31:69.20:0,69,1098	1/1:9,10:19:24.06:498,24,0	1/1:15,3:18:14.75:212,15,0	0/0:32,0:31:60.18:0,60,927	1/1:17,6:23:39.01:698,39,0	0/0:29,0:29:75.15:0,75,1150	0/0:28,0:28:36.10:0,36,551	0/0:12,0:13:24.04:0,24,375	0/0:16,0:16:36.11:0,36,566	0/0:12,0:12:14.84:0,15,252	0/0:20,0:20:39.13:0,39,650	0/0:17,0:17:24.08:0,24,429	0/0:14,0:14:27.08:0,27,429	0/0:21,0:21:48.10:0,48,748	0/0:15,0:15:24.08:0,24,397	0/0:14,0:14:30.10:0,30,503	0/0:10,0:10:24.04:0,24,347	0/0:13,0:13:30.10:0,30,500	0/0:24,0:24:53.98:0,54,902	0/0:14,0:14:30.09:0,30,477	0/0:22,0:22:36.11:0,36,574	0/0:28,0:27:72.18:0,72,1104	0/0:18,0:18:30.04:0,30,461	0/0:12,0:12:36.12:0,36,603
chr10	10848823	.	CATAT	C	8687.35	PASS	AB=0.636;AC=38;AF=0.679;AN=56;BaseQRankSum=5.689;DP=550;FS=1.490;HRun=0;HaplotypeScore=165.7621;InbreedingCoeff=0.7210;MQ=52.80;MQ0=5;MQRankSum=0.922;QD=22.33;ReadPosRankSum=3.782;VQSLOD=4.4506;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:20,14:35:42.53:709,43,0	1/1:2,5:7:12.02:172,12,0	0/0:12,0:3:2.33:0,2,8	0/0:18,0:2:0:0,0,0	0/0:28,0:28:63:0,63,1425	1/1:8,0:17:8.25:61,8,0	1/1:10,2:20:11.04:60,11,0	0/0:33,0:34:70.19:0,70,1686	0/1:7,0:20:5.83:42,0,6	1/1:9,30:39:84.27:1378,84,0	1/1:5,20:25:30.02:475,30,0	1/1:6,0:16:3:28,3,0	0/1:9,0:18:31.50:54,0,32	1/1:4,0:14:6.09:40,6,0	1/1:2,21:23:38.73:660,39,0	1/1:6,9:15:30.10:496,30,0	1/1:7,6:13:24.06:368,24,0	1/1:8,7:15:30.05:475,30,0	0/0:15,0:17:47.26:0,47,749	0/0:19,0:20:23.76:0,24,497	0/0:10,1:13:20.65:0,21,352	1/1:3,13:16:30.10:505,30,0	1/1:7,13:20:35.85:599,36,0	1/1:6,7:13:15.05:252,15,0	0/0:17,0:17:36.12:0,36,794	1/1:7,26:33:90.30:1498,90,0	1/1:6,10:16:24.06:377,24,0	1/1:3,10:13:27.08:437,27,0
chr10	10848858	.	A	ATG	691.66	PASS	AB=0.647;AC=3;AF=0.054;AN=56;BaseQRankSum=-1.025;DP=618;FS=4.651;HRun=0;HaplotypeScore=187.0116;InbreedingCoeff=0.1498;MQ=51.54;MQ0=10;MQRankSum=-0.021;QD=10.02;ReadPosRankSum=0.349;VQSLOD=3.3386;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:57.11:0,57,785	0/0:10,0:10:12.60:0,13,118	0/0:28,0:3:3.01:0,3,41	0/0:36,0:6:12.33:0,12,119	0/0:33,0:33:59.60:0,60,690	0/1:6,11:18:6.72:150,0,7	0/1:12,12:25:17.94:418,0,18	0/0:26,0:24:38.41:0,38,772	0/1:14,12:26:4.27:223,0,4	0/0:40,0:40:84.86:0,85,1091	0/0:22,0:21:16.33:0,16,314	0/0:17,0:17:15.03:0,15,196	0/0:13,0:13:11.91:0,12,152	0/0:22,0:22:33.44:0,33,449	0/0:22,0:22:37.94:0,38,501	0/0:17,0:17:26.31:0,26,291	0/0:19,0:19:12.48:0,12,262	0/0:13,0:13:24.84:0,25,278	0/0:18,0:14:7.77:0,8,286	0/0:23,0:23:30.44:0,30,203	0/0:23,0:22:18.59:0,19,278	0/0:12,0:12:29.09:0,29,349	0/0:21,0:21:36.59:0,37,426	0/0:11,0:11:14.17:0,14,167	0/0:20,0:20:32.99:0,33,379	0/0:35,0:34:68.78:0,69,998	0/0:15,0:15:14.50:0,15,220	0/0:13,0:13:29.71:0,30,355
chr10	10848860	.	A	ATGTG	3135.68	PASS	AB=0.753;AC=27;AF=0.500;AN=54;BaseQRankSum=-1.507;DP=626;FS=1.946;HRun=0;HaplotypeScore=195.1476;InbreedingCoeff=-0.2928;MQ=51.95;MQ0=10;MQRankSum=-0.848;QD=6.66;ReadPosRankSum=1.410;VQSLOD=2.8223;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:36:27.42:0,27,252	0/1:4,0:10:25.62:26,0,35	./.	0/0:37,0:7:6.01:0,6,73	0/1:15,0:30:63.32:87,0,63	0/1:17,0:17:20.60:136,0,21	0/1:25,0:25:18.69:251,0,19	0/1:19,7:24:27.11:303,0,27	0/1:26,0:26:39.89:114,0,40	0/1:33,0:39:99:188,0,125	1/1:13,0:21:13.52:68,14,0	0/0:4,0:18:15.47:0,15,140	0/0:7,0:13:6.01:0,6,56	0/0:5,0:22:30.50:0,31,281	0/1:16,0:22:31.43:45,0,31	0/1:8,0:18:38.66:39,0,122	0/1:7,0:21:60.31:60,0,65	0/1:8,0:13:28.20:28,0,105	1/1:15,1:13:20.76:247,21,0	1/1:8,12:25:32.37:615,32,0	1/1:10,14:26:32.84:688,33,0	0/1:8,0:12:30.51:31,0,37	0/1:11,0:21:24.82:54,0,25	0/1:7,0:16:34.01:34,0,37	0/1:8,0:20:31.42:45,0,31	1/1:28,0:34:28.16:134,28,0	0/1:7,0:16:54.22:67,0,54	0/1:9,0:13:33.90:48,0,34
chr10	10853221	.	AGTT	A	3035.70	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=10.912;DP=662;FS=0.970;HRun=0;HaplotypeScore=94.0016;InbreedingCoeff=0.9968;MQ=80.83;MQ0=0;MQRankSum=-2.610;QD=33.36;ReadPosRankSum=-0.241;VQSLOD=4.0963;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,144,3134	0/0:6,0:6:18.06:0,18,396	0/0:18,0:18:26.57:0,27,791	0/0:18,0:18:36.57:0,37,661	0/0:20,0:20:48.16:0,48,1057	0/0:21,0:21:51.18:0,51,1126	0/0:41,0:41:99:0,120,2455	1/1:7,18:25:51.16:794,51,0	0/0:27,0:27:81.28:0,81,1771	0/0:28,0:28:75.24:0,75,1611	0/0:15,0:15:42.13:0,42,886	0/0:25,0:25:72.25:0,72,1590	0/0:24,0:24:66.20:0,66,1388	0/0:15,0:15:39.13:0,39,848	0/0:16,0:16:48.16:0,48,1058	0/0:18,0:18:51.17:0,51,1109	0/0:37,0:37:99:0,102,2251	0/0:33,0:33:99:0,99,2048	1/1:0,13:13:39.10:572,39,0	1/1:2,16:18:36.12:578,36,0	1/1:2,33:35:78.25:1252,78,0	0/0:18,0:18:48.16:0,48,1057	0/0:20,0:20:54.19:0,54,1188	0/0:48,0:48:99:0,129,2842	0/0:24,0:24:72.23:0,72,1547	0/0:23,0:23:66.23:0,66,1456	0/0:19,0:19:54.19:0,54,1192	0/0:8,0:8:24.08:0,24,502
chr10	10856842	.	ATG	A	2282.63	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=10.501;DP=674;FS=4.626;HRun=0;HaplotypeScore=76.9197;InbreedingCoeff=0.9975;MQ=87.02;MQ0=0;MQRankSum=-1.474;QD=33.08;ReadPosRankSum=1.795;VQSLOD=5.6643;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,111,1870	0/0:9,0:9:27.09:0,27,479	0/0:30,0:30:81.15:0,81,1279	0/0:17,0:17:39.60:0,40,667	0/0:30,0:30:81.26:0,81,1404	1/1:1,24:25:60.20:824,60,0	1/1:1,20:21:54.18:736,54,0	0/0:28,0:28:75.24:0,75,1271	1/1:0,23:23:63.21:866,63,0	0/0:23,0:23:66.22:0,66,1146	0/0:21,0:21:63.20:0,63,1082	0/0:24,0:24:69.24:0,69,1219	0/0:19,0:19:51.15:0,51,872	0/0:29,0:29:87.30:0,87,1536	0/0:37,0:37:99:0,108,1887	0/0:22,1:23:25.02:0,25,1077	0/0:21,0:21:60.14:0,60,972	0/0:12,0:12:33.11:0,33,571	0/0:28,0:28:72.23:0,72,1234	0/0:22,0:22:63.22:0,63,1103	0/0:39,0:39:99:0,114,1995	0/0:26,0:26:78.27:0,78,1376	0/0:18,0:18:54.18:0,54,952	0/0:23,0:23:66.18:0,66,1133	0/0:16,0:16:45.14:0,45,770	0/0:33,0:33:96.32:0,96,1660	0/0:32,0:32:96.33:0,96,1676	0/0:7,0:7:21.07:0,21,364
chr10	10857833	.	C	CT	1016.40	PASS	AB=1.000;AC=22;AF=0.733;AN=30;BaseQRankSum=-0.431;DP=213;FS=0.000;HRun=10;HaplotypeScore=40.0298;InbreedingCoeff=0.1661;MQ=27.23;MQ0=119;MQRankSum=-1.207;QD=8.54;ReadPosRankSum=0.201;VQSLOD=0.8270;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	0/1:10,0:10:0.96:112,0,1	0/0:5,0:1:0:0,0,0	0/1:7,0:2:18.03:19,0,18	1/1:4,9:12:26.95:251,27,0	./.	./.	./.	./.	1/1:13,0:9:11.65:68,12,0	1/1:16,0:15:23.81:167,24,0	./.	1/1:0,5:1:3.01:32,3,0	./.	./.	./.	./.	1/1:6,0:1:2.97:20,3,0	./.	1/1:3,4:6:8.98:84,9,0	./.	0/1:8,0:8:28.36:81,0,28	1/1:8,0:8:14.83:102,15,0	./.	1/1:4,5:8:11.99:116,12,0	1/1:12,0:5:8.92:62,9,0	0/0:8,0:2:2.96:0,3,19	0/1:5,0:3:0:0,0,0
chr10	10857843	.	T	TC	1398.39	PASS	AB=0.900;AC=23;AF=0.767;AN=30;BaseQRankSum=-2.698;DP=205;FS=0.000;HRun=2;HaplotypeScore=37.8651;InbreedingCoeff=0.0393;MQ=37.03;MQ0=112;MQRankSum=-1.700;QD=11.37;ReadPosRankSum=2.589;VQSLOD=1.8358;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	1/1:2,8:10:22.94:307,23,0	0/0:7,1:1:0:0,0,0	0/1:7,0:4:5.65:6,0,15	0/1:18,0:17:53.70:54,0,55	./.	./.	./.	./.	1/1:4,7:6:17.99:202,18,0	1/1:1,11:11:24.08:319,24,0	./.	1/1:5,0:1:2.84:14,3,0	./.	./.	./.	./.	1/1:3,3:1:3.01:40,3,0	./.	0/1:7,0:6:13.81:14,0,27	./.	1/1:2,6:8:6.16:186,6,0	1/1:1,5:6:15.04:181,15,0	./.	0/1:10,0:9:19.11:29,0,19	1/1:3,7:4:12.03:144,12,0	1/1:3,3:1:0.47:1,0,0	0/1:0,4:3:0:0,0,0
chr10	10857871	.	C	CTT	664.16	PASS	AB=0.615;AC=15;AF=0.750;AN=20;BaseQRankSum=-0.954;DP=178;FS=13.012;HRun=9;HaplotypeScore=30.1307;InbreedingCoeff=0.3838;MQ=42.73;MQ0=94;MQRankSum=-2.715;QD=10.38;ReadPosRankSum=1.492;VQSLOD=-0.1685;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	1/1:4,0:6:12.58:47,13,0	0/0:16,0:1:3:0,3,29	0/0:13,0:3:2.61:0,3,18	1/1:5,13:18:32.79:459,33,0	./.	./.	./.	./.	0/1:3,0:5:1.05:15,0,1	./.	./.	1/1:3,0:1:2.22:7,2,0	./.	./.	./.	./.	./.	./.	1/1:3,0:7:2.68:17,3,0	./.	./.	1/1:2,0:5:7.03:23,7,0	./.	1/1:1,7:7:14.96:167,15,0	1/1:3,0:2:4.87:17,5,0	./.	./.
chr10	10859241	.	C	CT	709.50	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-1.769;DP=551;FS=8.420;HRun=8;HaplotypeScore=56.3253;InbreedingCoeff=0.7601;MQ=56.06;MQ0=13;MQRankSum=-1.260;QD=21.50;ReadPosRankSum=1.012;VQSLOD=3.7148;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,30:33:72.04:804,72,0	0/0:3,0:3:6:0,6,55	0/0:25,0:11:11.97:0,12,103	0/0:25,0:12:9.21:0,9,82	0/0:24,0:23:50.99:0,51,462	0/0:12,0:13:17.04:0,17,143	0/0:15,0:15:33.02:0,33,302	0/0:23,0:20:41.96:0,42,367	0/0:23,0:23:47.78:0,48,433	0/0:21,0:21:42.02:0,42,384	0/0:30,0:29:78.04:0,78,712	0/0:10,0:10:11.76:0,12,110	0/0:10,0:10:18:0,18,165	0/0:8,0:8:12:0,12,110	0/0:16,0:16:33:0,33,297	0/0:13,0:13:24:0,24,220	0/0:31,0:31:84.04:0,84,769	0/0:18,0:18:45.02:0,45,412	0/0:22,0:14:33.01:0,33,299	0/0:34,0:33:75.02:0,75,686	0/0:29,1:30:28.39:0,28,505	0/0:16,0:16:36:0,36,322	0/0:23,0:23:45.01:0,45,411	0/0:19,0:19:49.58:0,50,443	0/0:11,0:11:30:0,30,269	0/0:27,0:27:60.03:0,60,548	0/0:18,0:18:30.01:0,30,274	0/0:9,0:9:12:0,12,110
chr10	10859659	.	TAGAAAGAAAGAA	T	10180.05	PASS	AB=0.727;AC=35;AF=0.700;AN=50;BaseQRankSum=2.801;DP=477;FS=7.443;HRun=0;HaplotypeScore=157.3219;InbreedingCoeff=0.5370;MQ=52.77;MQ0=7;MQRankSum=-6.611;QD=30.66;ReadPosRankSum=2.785;VQSLOD=3.7622;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,0:19:18.04:437,18,0	1/1:1,5:5:6.02:208,6,0	./.	./.	1/1:2,0:11:2.68:65,3,0	0/0:11,0:22:33.10:0,33,1297	0/0:8,0:14:9.03:0,9,367	0/0:21,0:20:15.01:0,15,151	0/0:12,0:19:27.08:0,27,1023	1/1:12,10:22:30.10:909,30,0	0/1:11,5:14:10.87:299,0,11	1/1:5,0:15:18.06:503,18,0	1/1:3,0:15:24.08:671,24,0	1/1:8,0:14:9.03:252,9,0	1/1:5,10:15:27.09:934,27,0	1/1:9,7:15:15.05:519,15,0	1/1:10,6:16:9.03:311,9,0	0/1:9,3:12:14.33:145,0,14	0/0:11,0:17:2.34:0,2,112	0/1:10,0:25:19.67:64,0,20	0/0:8,0:8:2.04:0,2,6	1/1:10,14:20:24.07:683,24,0	1/1:9,19:23:19.21:644,19,0	1/1:9,3:11:12.04:358,12,0	1/1:2,0:9:6.02:168,6,0	1/1:7,19:25:51.15:1592,51,0	1/1:7,16:22:42.14:1419,42,0	./.
chr10	10861691	.	C	CT	482.52	PASS	AB=0.964;AC=6;AF=0.107;AN=56;BaseQRankSum=-1.698;DP=491;FS=0.000;HRun=13;HaplotypeScore=58.4679;InbreedingCoeff=0.3910;MQ=52.32;MQ0=10;MQRankSum=2.386;QD=5.13;ReadPosRankSum=-0.943;VQSLOD=1.4540;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:38,0:37:6.02:6,0,307	0/0:5,0:5:14.88:0,15,103	0/0:6,0:4:2.61:0,3,20	0/0:4,0:1:2.94:0,3,18	1/1:3,20:24:47.84:424,48,0	0/0:21,0:20:29.49:0,29,205	0/0:10,0:10:23.80:0,24,164	0/0:31,0:27:44.41:0,44,308	0/0:14,0:14:23.44:0,23,152	0/0:29,0:29:52.44:0,52,355	0/0:22,0:21:31.95:0,32,222	0/0:14,2:16:1.88:0,2,157	0/0:12,0:14:24.68:0,25,166	0/0:20,0:20:23.43:0,23,157	0/0:26,0:26:21.56:0,22,265	0/0:16,0:17:25.72:0,26,170	0/0:18,0:19:40.68:0,41,273	0/1:11,1:13:23.59:24,0,118	0/0:17,0:17:40.63:0,41,273	0/0:19,0:18:7.32:0,7,142	0/0:10,0:10:14.75:0,15,103	0/0:11,0:11:11.65:0,12,76	0/0:20,0:20:41.34:0,41,280	0/0:12,0:12:20.71:0,21,144	1/1:7,12:18:1.33:148,1,0	0/0:21,0:21:21.78:0,22,145	0/0:23,0:22:28.62:0,29,342	0/0:8,0:8:14.79:0,15,102
chr10	10861949	.	G	GT	6850.95	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-10.149;DP=494;FS=5.752;HRun=8;HaplotypeScore=49.0386;InbreedingCoeff=0.9325;MQ=60.28;MQ0=11;MQRankSum=2.925;QD=24.29;ReadPosRankSum=2.925;VQSLOD=5.5363;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:96.03:0,96,873	1/1:3,10:11:21.06:239,21,0	0/0:40,0:21:10.42:0,10,218	0/0:32,0:13:0.73:0,1,123	0/0:26,0:26:69.04:0,69,631	1/1:2,12:14:30.09:346,30,0	1/1:0,8:7:15.04:171,15,0	0/0:18,0:18:42:0,42,380	1/1:1,17:16:36.11:415,36,0	1/1:2,23:25:69.20:790,69,0	1/1:5,9:14:21.06:243,21,0	1/1:2,6:7:9.03:104,9,0	1/1:1,8:9:15.04:173,15,0	1/1:1,13:13:17.78:208,18,0	1/1:2,14:16:22.25:462,22,0	1/1:2,12:14:18.05:208,18,0	1/1:0,32:32:78.23:900,78,0	1/1:1,8:9:24.07:277,24,0	0/0:10,0:10:24.01:0,24,220	0/0:17,0:17:39.02:0,39,357	0/0:16,0:16:34.83:0,35,307	1/1:1,8:9:21.06:240,21,0	1/1:0,19:15:45.13:519,45,0	1/1:2,17:19:48.14:551,48,0	0/0:19,0:18:48.02:0,48,438	1/1:6,16:20:48.14:554,48,0	1/1:1,11:12:24.05:277,24,0	1/1:1,6:7:15.04:173,15,0
chr10	10863181	.	TTC	T	2110.24	PASS	AB=0.953;AC=33;AF=0.589;AN=56;BaseQRankSum=-5.462;DP=403;FS=8.796;HRun=0;HaplotypeScore=70.5654;InbreedingCoeff=-0.3667;MQ=44.14;MQ0=11;MQRankSum=1.239;QD=5.51;ReadPosRankSum=-2.363;VQSLOD=0.7965;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:31,0:29:10.84:214,11,0	0/1:9,1:8:42.66:86,0,43	0/1:19,0:7:19.13:19,0,57	0/1:17,0:4:2.18:2,0,76	1/1:19,0:17:27.27:139,27,0	0/1:10,0:9:17.83:35,0,18	1/1:5,0:4:4.26:12,4,0	1/1:16,0:8:5.78:110,6,0	0/0:12,0:12:10.52:0,11,62	1/1:19,4:18:5.75:288,6,0	0/1:10,2:8:3.46:78,0,3	0/1:8,0:7:6.25:6,0,40	0/1:12,0:14:41.12:41,0,43	0/0:8,0:6:14:0,14,71	0/1:12,3:12:3.05:138,0,3	1/1:7,2:7:6.52:127,7,0	0/1:19,0:17:15.37:91,0,15	0/1:8,0:6:13.30:13,0,21	0/1:16,0:13:12.50:51,0,12	0/1:17,0:14:13.20:65,0,13	0/1:5,2:6:22.47:49,0,22	0/1:13,0:13:32.30:50,0,32	1/1:10,1:8:6.03:56,6,0	0/1:14,0:10:35.54:103,0,36	0/1:20,0:15:31.21:41,0,31	0/1:15,3:17:52.57:198,0,53	0/1:19,3:22:57.71:222,0,58	0/1:10,0:7:8.28:33,0,8
chr10	10863182	.	TC	T	2945.25	PASS	AB=0.968;AC=43;AF=0.768;AN=56;BaseQRankSum=-3.285;DP=397;FS=1.388;HRun=1;HaplotypeScore=63.2524;InbreedingCoeff=-0.0718;MQ=42.57;MQ0=11;MQRankSum=-0.834;QD=7.73;ReadPosRankSum=2.712;VQSLOD=1.1361;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:23,8:29:41.77:507,42,0	0/1:10,0:8:28.68:64,0,29	0/1:14,1:5:3.99:4,0,68	0/0:15,1:4:2.55:0,3,66	1/1:19,0:17:38.54:261,39,0	1/1:10,0:9:0.10:78,0,0	1/1:5,0:4:5.19:26,5,0	1/1:16,0:8:6.12:94,6,0	0/1:12,0:12:1.08:28,0,1	1/1:23,0:18:24.64:265,25,0	1/1:12,0:8:8.19:103,8,0	0/1:8,0:7:0.85:44,0,1	0/1:11,3:14:0.14:84,0,0	0/1:8,0:6:3.95:6,0,4	1/1:15,0:12:25.04:165,25,0	1/1:9,0:7:10.20:103,10,0	1/1:18,1:17:23.06:202,23,0	0/1:7,1:6:13.45:13,0,15	1/1:14,1:12:14.72:111,15,0	1/1:18,0:15:26.59:124,27,0	0/1:7,0:6:16.52:31,0,17	0/1:13,0:13:20.49:64,0,20	1/1:11,0:8:17.68:97,18,0	0/1:13,0:10:7.35:88,0,7	1/1:21,0:16:20:114,20,0	0/1:17,0:16:9.30:182,0,9	1/1:21,1:22:9.70:204,10,0	1/1:10,0:7:1.05:22,1,0
chr10	10863187	.	TTC	T	1968.43	PASS	AB=0.968;AC=38;AF=0.679;AN=56;BaseQRankSum=0.552;DP=376;FS=13.810;HRun=0;HaplotypeScore=66.5462;InbreedingCoeff=-0.4398;MQ=39.77;MQ0=11;MQRankSum=3.170;QD=5.41;ReadPosRankSum=-0.607;VQSLOD=0.8357;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:26:70.80:213,0,71	0/1:10,0:8:29.37:45,0,29	0/0:12,0:3:0.20:0,0,1	0/1:15,0:4:14.48:14,0,60	1/1:18,1:17:16.62:224,17,0	1/1:10,0:9:17.67:115,18,0	1/1:5,0:4:5.29:22,5,0	1/1:13,0:5:5.82:54,6,0	1/1:12,0:12:3.66:68,4,0	0/1:19,0:13:29.47:55,0,29	1/1:10,1:7:0.63:81,1,0	0/1:6,2:7:71.50:72,0,85	0/1:14,0:14:14.89:85,0,15	0/1:8,1:7:15.20:15,0,37	0/1:13,0:10:34.02:34,0,37	1/1:7,1:6:14.75:89,15,0	0/1:20,0:18:20.93:87,0,21	1/1:3,4:5:5.92:39,6,0	0/1:12,1:10:37.07:55,0,37	1/1:17,0:13:26.46:138,26,0	1/1:6,1:6:8.74:47,9,0	0/1:13,0:13:22.55:34,0,23	0/1:9,1:7:5.79:40,0,6	0/1:12,0:9:13.72:107,0,14	0/1:19,1:14:62.01:131,0,62	0/1:16,0:15:37.50:110,0,37	0/1:22,0:22:62.51:65,0,63	1/1:12,1:10:1.14:78,1,0
chr10	10863188	.	TC	T	4051.82	PASS	AB=0.889;AC=47;AF=0.839;AN=56;BaseQRankSum=-0.186;DP=371;FS=17.707;HRun=1;HaplotypeScore=55.9212;InbreedingCoeff=0.0678;MQ=40.13;MQ0=11;MQRankSum=0.223;QD=11.68;ReadPosRankSum=1.123;VQSLOD=0.4653;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:22,7:27:1.57:343,2,0	0/1:8,2:8:10.39:46,0,10	0/0:9,1:2:0.21:0,0,1	0/0:14,0:4:4.85:0,5,56	1/1:18,0:16:25.81:239,26,0	1/1:7,3:9:23.78:215,24,0	1/1:4,1:4:6.02:76,6,0	1/1:11,2:5:7.68:85,8,0	1/1:6,6:12:18.69:252,19,0	0/1:15,3:13:12.93:180,0,13	1/1:5,6:7:10.16:100,10,0	0/1:7,1:7:23.28:36,0,23	1/1:11,3:14:27.49:254,27,0	1/1:8,1:7:8.89:119,9,0	0/1:11,2:10:2.73:105,0,3	1/1:5,3:6:15.27:148,15,0	1/1:17,3:18:29.10:215,29,0	1/1:5,2:5:5.92:39,6,0	1/1:14,0:11:4.77:152,5,0	1/1:9,8:13:35.75:382,36,0	1/1:5,2:6:8.74:47,9,0	1/1:4,8:12:16.19:143,16,0	1/1:6,3:6:2.64:65,3,0	1/1:11,1:9:13.04:116,13,0	0/1:20,0:14:9.10:85,0,9	1/1:10,6:15:3.37:269,3,0	1/1:20,2:22:8.63:217,9,0	1/1:11,2:10:15.59:124,16,0
chr10	10865861	.	TG	T	1572.27	PASS	AB=0.833;AC=21;AF=0.389;AN=54;BaseQRankSum=13.607;DP=657;FS=0.439;HRun=1;HaplotypeScore=85.1897;InbreedingCoeff=-0.6363;MQ=53.34;MQ0=39;MQRankSum=-12.803;QD=3.08;ReadPosRankSum=3.880;VQSLOD=-0.1018;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:29,7:36:99:151,0,1144	0/1:14,2:16:38.52:39,0,573	./.	0/0:11,0:2:5.99:0,6,61	0/1:16,3:19:74.09:74,0,589	0/1:15,7:21:99:196,0,521	0/1:28,6:34:99:122,0,1020	0/0:14,0:12:36.10:0,36,548	0/1:25,4:28:2.27:2,0,1038	0/1:17,4:19:26.62:27,0,732	0/1:12,2:14:47.49:47,0,418	0/1:23,5:28:99:125,0,1013	0/1:18,4:21:62:62,0,775	0/1:25,7:28:43.37:43,0,1045	0/1:19,5:21:65.20:65,0,727	0/1:19,11:28:99:292,0,824	0/0:41,4:45:6.93:0,7,1839	0/1:11,5:15:99:122,0,466	0/0:21,0:10:24.08:0,24,384	0/1:20,4:22:20.39:20,0,832	0/1:39,4:40:46.92:47,0,1603	0/1:5,3:5:29.82:30,0,131	0/1:12,3:15:56.79:57,0,308	0/1:29,5:32:28.86:29,0,1241	0/1:14,5:17:99:119,0,524	0/0:35,5:38:21.48:0,21,1452	0/1:21,4:24:56.20:56,0,839	0/0:9,1:9:24.05:0,24,352
chr10	10866362	.	CACACACACACACACACG	C	1894.60	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=2.376;DP=397;FS=8.804;HRun=0;HaplotypeScore=136.9368;InbreedingCoeff=0.1575;MQ=48.26;MQ0=17;MQRankSum=-0.729;QD=9.33;ReadPosRankSum=-3.537;VQSLOD=0.9138;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:44,0:43:95.17:95,0,3084	0/0:2,0:1:3.01:0,3,125	0/0:21,0:9:26.52:0,27,546	0/0:27,0:12:29.18:0,29,705	1/1:2,0:2:3:27,3,0	1/1:9,1:9:24.05:605,24,0	1/1:2,25:27:8.56:389,9,0	0/0:5,0:5:10.07:0,10,279	1/1:3,12:14:15.05:719,15,0	0/1:9,0:8:4.47:4,0,887	0/1:9,0:8:13.94:14,0,469	0/0:10,0:10:16.67:0,17,908	0/1:5,0:5:10.92:11,0,819	0/1:14,0:14:47.63:48,0,1014	0/0:14,0:13:18.50:0,18,1066	0/0:6,0:6:12.04:0,12,731	0/1:24,0:22:12.34:12,0,1916	0/0:20,0:16:16.20:0,16,2285	0/0:6,0:4:9.03:0,9,348	0/0:7,0:7:9.03:0,9,474	0/0:38,0:36:63.21:0,63,2865	0/1:11,0:11:4.01:4,0,879	0/0:7,0:6:5.39:0,5,354	0/1:24,0:23:24.41:24,0,985	1/1:5,0:5:3.01:96,3,0	0/0:17,0:15:19.22:0,19,1956	0/0:13,0:13:0.31:0,0,1156	0/1:4,0:4:13.96:14,0,392
chr10	10866378	.	CG	C	1734.46	PASS	AB=0.859;AC=35;AF=0.625;AN=56;BaseQRankSum=-1.334;DP=411;FS=14.446;HRun=10;HaplotypeScore=85.6414;InbreedingCoeff=0.5250;MQ=60.23;MQ0=13;MQRankSum=2.547;QD=6.13;ReadPosRankSum=5.865;VQSLOD=0.2755;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:13,17:30:15.84:287,16,0	0/0:1,2:2:0.89:0,1,2	0/0:26,0:15:31.26:0,31,248	0/0:20,0:12:3.25:0,3,198	0/0:5,0:5:12.01:0,12,116	1/1:4,7:10:26.89:216,27,0	1/1:26,1:27:8.96:72,9,0	0/0:9,0:9:5.96:0,6,44	1/1:15,0:14:14.81:98,15,0	1/1:5,4:8:11.03:84,11,0	1/1:6,3:9:5.94:52,6,0	1/1:9,2:12:5.88:51,6,0	0/1:8,1:9:4.59:43,0,5	1/1:16,2:18:10.93:102,11,0	1/1:12,3:16:7.96:67,8,0	1/1:2,5:8:10.49:75,10,0	0/1:19,5:25:17.31:109,0,17	0/1:12,3:11:21.43:65,0,21	0/0:8,0:6:5.81:0,6,46	0/0:6,0:6:0:0,0,0	0/0:32,0:36:51.95:0,52,321	1/1:6,4:10:11.47:101,11,0	1/1:6,3:8:11.85:103,12,0	1/1:19,7:25:3.45:85,3,0	0/0:12,0:12:5.91:0,6,50	1/1:5,4:9:11.99:104,12,0	1/1:9,8:18:17.22:143,17,0	1/1:0,4:4:6:52,6,0
chr10	10868284	.	T	TAAGA	5168.14	PASS	AB=0.971;AC=20;AF=0.400;AN=50;BaseQRankSum=-7.454;DP=499;FS=5.261;HRun=0;HaplotypeScore=103.8869;InbreedingCoeff=0.6027;MQ=61.39;MQ0=0;MQRankSum=1.710;QD=19.50;ReadPosRankSum=-1.093;VQSLOD=3.7586;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:1.27:0,1,23	1/1:5,4:10:9.03:209,9,0	./.	./.	0/0:25,0:25:42:0,42,371	0/0:21,0:21:12.01:0,12,112	0/0:13,0:13:0.37:0,0,1	./.	0/1:22,0:22:5.02:5,0,37	1/1:27,5:31:43.32:726,43,0	1/1:11,10:21:27.48:495,27,0	0/0:17,0:17:27.03:0,27,329	0/0:20,0:20:27.06:0,27,369	0/0:15,0:15:36.05:0,36,429	0/1:20,0:20:99:119,0,143	0/0:10,0:11:21.07:0,21,321	0/1:18,0:18:0.03:184,0,0	1/1:7,10:17:14.98:339,15,0	0/0:15,0:15:5.97:0,6,48	0/0:16,0:16:9.92:0,10,58	0/0:9,0:9:3:0,3,25	1/1:10,2:12:21.05:385,21,0	1/1:13,12:26:19.78:423,20,0	1/1:19,10:29:54.06:1046,54,0	0/0:13,0:13:21.01:0,21,188	1/1:22,6:27:36.09:670,36,0	0/1:26,4:28:6.51:568,0,7	0/0:2,0:2:6.02:0,6,92
chr10	10868316	.	AAAGAAAGAAAGAAAGAAAGG	A	2321.11	PASS	AB=1.000;AC=12;AF=0.214;AN=56;BaseQRankSum=1.037;DP=523;FS=1.928;HRun=0;HaplotypeScore=278.1663;InbreedingCoeff=0.2943;MQ=56.52;MQ0=2;MQRankSum=-4.022;QD=15.47;ReadPosRankSum=-3.113;VQSLOD=1.9304;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:14,0:14:99:175,0,101	0/0:11,0:11:33.07:0,33,1627	0/0:1,0:1:3.01:0,3,33	0/0:4,0:2:0.95:0,1,28	0/0:28,0:28:84.24:0,84,3330	1/1:0,20:20:12.04:672,12,0	1/1:1,15:16:6.02:290,6,0	0/1:18,0:17:88.59:89,0,432	1/1:17,3:20:56.97:1175,57,0	0/0:39,0:38:99:0,108,5520	0/0:20,0:20:58.71:0,59,3008	0/0:16,0:16:48.14:0,48,2898	0/0:18,0:18:54.18:0,54,3827	0/0:24,0:24:71.99:0,72,4277	0/1:21,0:21:14.75:15,0,3306	0/0:17,0:17:31.16:0,31,2885	0/0:20,0:20:59.91:0,60,2047	0/0:21,0:21:45.02:0,45,2130	0/1:15,0:15:2.33:2,0,455	0/1:18,0:18:33.10:33,0,494	0/1:8,0:8:27.31:27,0,107	0/0:13,0:13:39.12:0,39,2292	0/0:23,0:23:52.70:0,53,2907	0/0:36,0:36:99:0,102,5805	0/0:15,0:15:42.14:0,42,1942	0/0:30,0:29:84.23:0,84,4329	0/0:34,0:33:99:0,99,5205	0/0:3,0:3:9.02:0,9,603
chr10	10868319	.	GAAA	G	278.61	PASS	AB=0.955;AC=12;AF=0.214;AN=56;BaseQRankSum=8.290;DP=534;FS=7.809;HRun=3;HaplotypeScore=116.6071;InbreedingCoeff=0.1340;MQ=56.53;MQ0=2;MQRankSum=-5.134;QD=1.95;ReadPosRankSum=1.706;VQSLOD=-0.7042;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:31.22:0,31,425	0/0:12,0:12:36.12:0,36,587	1/1:1,0:1:2.92:17,3,0	0/1:5,0:3:17.99:18,0,69	0/0:28,0:28:21.96:0,22,559	1/1:20,0:20:11.95:91,12,0	0/1:16,0:16:8.97:9,0,9	0/1:20,0:19:24.49:24,0,543	0/1:19,0:19:99:145,0,225	0/0:37,0:36:99:0,108,1873	0/0:20,0:20:60.20:0,60,985	0/0:16,0:16:48.15:0,48,927	0/0:18,0:18:54.18:0,54,1094	0/0:24,0:24:72.17:0,72,1340	0/0:21,0:21:63.21:0,63,1257	0/0:17,0:17:51.06:0,51,944	0/0:21,0:21:63.12:0,63,941	0/0:21,0:21:45.09:0,45,677	0/1:14,1:15:14.38:14,0,417	0/1:17,5:22:87.33:87,0,418	0/1:7,1:8:19.30:19,0,138	0/0:13,0:13:39.12:0,39,675	0/0:23,0:23:54.10:0,54,846	0/0:35,0:35:99:0,102,1717	0/1:17,0:16:0.05:0,0,264	0/0:31,0:30:87.28:0,87,1410	0/0:34,0:33:99:0,102,1693	0/0:5,0:5:12.01:0,12,208
chr10	10868323	.	GAAAGAAAGA	G	975.31	PASS	AB=0.925;AC=9;AF=0.161;AN=56;BaseQRankSum=7.922;DP=542;FS=5.589;HRun=0;HaplotypeScore=178.5078;InbreedingCoeff=0.2586;MQ=57.33;MQ0=2;MQRankSum=-4.009;QD=8.71;ReadPosRankSum=0.643;VQSLOD=2.4476;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:15,0:15:82.15:82,0,215	0/0:12,0:12:36.12:0,36,989	0/0:1,0:1:3.01:0,3,41	0/0:9,0:4:12.02:0,12,148	0/0:28,0:28:66.24:0,66,709	1/1:20,0:20:12.04:250,12,0	1/1:16,0:16:6.01:79,6,0	0/0:20,0:19:47.17:0,47,362	0/1:17,0:17:99:142,0,176	0/0:38,0:37:99:0,111,3028	0/0:20,0:20:58.43:0,58,1526	0/0:17,0:17:51.17:0,51,1598	0/0:18,0:18:54.18:0,54,2003	0/0:24,0:24:72.23:0,72,2259	0/0:22,0:22:66.09:0,66,1979	0/0:17,0:17:49.72:0,50,1567	0/0:22,0:22:64.46:0,64,1326	0/0:20,0:20:42.14:0,42,1171	0/1:14,1:15:81.55:82,0,161	0/1:17,5:22:99:418,0,172	0/1:6,1:7:66.04:66,0,78	0/0:13,0:13:39.12:0,39,1166	0/0:24,0:24:52.10:0,52,1348	0/0:37,0:37:99:0,102,3099	0/0:19,0:18:45.61:0,46,482	0/0:30,0:29:87.29:0,87,2356	0/0:33,0:32:99:0,99,2732	0/0:6,0:6:15.05:0,15,418
chr10	10868327	.	GAAA	G	514.17	PASS	AB=0.944;AC=9;AF=0.161;AN=56;BaseQRankSum=7.956;DP=555;FS=5.582;HRun=3;HaplotypeScore=121.9586;InbreedingCoeff=0.0563;MQ=58.25;MQ0=2;MQRankSum=-1.295;QD=3.60;ReadPosRankSum=0.722;VQSLOD=-0.5290;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:14,0:14:34.25:34,0,327	0/0:12,0:12:36.12:0,36,587	0/0:3,0:3:6.01:0,6,64	0/0:10,0:5:13.55:0,14,141	0/1:22,7:29:91.20:287,0,91	1/1:20,0:20:11.90:83,12,0	0/1:16,0:16:6.90:7,0,11	0/0:20,0:19:51.91:0,52,289	0/1:11,0:11:20.47:20,0,249	0/0:39,0:38:99:0,114,1932	0/0:20,0:20:58.91:0,59,908	0/0:17,0:17:51.13:0,51,962	0/0:19,0:19:57.14:0,57,1112	0/0:24,0:24:72.23:0,72,1350	0/0:23,0:23:69.12:0,69,1298	0/0:18,0:18:34.21:0,34,947	0/0:24,0:24:67.71:0,68,1052	0/0:21,0:21:45.08:0,45,696	0/0:16,0:16:3.76:0,4,158	0/1:22,0:22:22.93:23,0,131	0/1:7,0:7:12.67:13,0,64	0/0:14,0:14:42.10:0,42,707	0/0:25,0:25:55.41:0,55,844	0/0:38,0:38:99:0,105,1760	0/1:18,6:23:99:188,0,99	0/0:29,0:28:84.28:0,84,1394	0/0:33,0:32:99:0,99,1640	0/0:6,0:6:15.05:0,15,264
chr10	10868387	.	AGAAAGGAAAGGAAAGGAAAGGAAAGGAAAG	A	3028.61	PASS	AB=1.000;AC=23;AF=0.479;AN=48;BaseQRankSum=1.246;DP=618;FS=0.741;HRun=0;HaplotypeScore=393.5852;InbreedingCoeff=0.7135;MQ=55.34;MQ0=16;MQRankSum=-0.796;QD=12.78;ReadPosRankSum=-1.334;VQSLOD=1.0146;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:23:13.86:0,14,564	./.	0/0:50,0:18:3.01:0,3,70	0/0:57,0:23:0.29:0,0,0	0/0:21,0:25:42.14:0,42,3300	0/0:24,0:24:36.12:0,36,2588	0/0:20,0:19:39.13:0,39,2216	0/0:20,0:19:6.01:0,6,96	0/0:22,0:22:45.15:0,45,3893	1/1:22,11:33:21.02:557,21,0	1/1:10,7:17:2.97:20,3,0	./.	./.	./.	1/1:17,0:17:15.04:614,15,0	1/1:14,0:14:9.03:398,9,0	1/1:23,0:23:12:297,12,0	1/1:12,0:12:6.02:253,6,0	0/0:17,0:23:24.08:0,24,1195	0/0:23,0:37:60.21:0,60,3398	0/0:11,0:11:21.07:0,21,1403	1/1:4,12:16:2.97:20,3,0	1/1:11,14:25:0.29:14,0,0	0/1:22,0:21:0.87:15,0,1	0/0:15,0:27:51.17:0,51,3472	1/1:22,6:28:15.47:491,15,0	1/1:24,0:24:6.02:240,6,0	1/1:6,0:6:6.02:284,6,0
chr10	10868405	.	AAGG	A	1779.25	PASS	AB=0.805;AC=12;AF=0.214;AN=56;BaseQRankSum=10.820;DP=521;FS=3.764;HRun=0;HaplotypeScore=112.3716;InbreedingCoeff=-0.2767;MQ=48.09;MQ0=18;MQRankSum=-4.236;QD=8.12;ReadPosRankSum=3.261;VQSLOD=2.9907;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:19.01:0,19,290	0/1:3,4:7:68.94:137,0,69	0/0:24,0:8:17.53:0,18,202	0/0:38,0:9:10.15:0,10,126	0/1:23,0:23:3.04:3,0,456	0/0:22,0:22:54.18:0,54,1009	0/0:27,0:26:75.24:0,75,1208	0/0:12,0:10:27.08:0,27,362	0/0:20,0:20:57.19:0,57,1140	0/1:23,0:23:99:160,0,389	0/0:14,0:14:21.06:0,21,276	0/0:10,0:10:17.99:0,18,197	0/0:12,0:12:24.03:0,24,301	0/0:6,0:6:10.23:0,10,94	0/1:9,12:21:99:458,0,320	0/1:7,7:14:99:269,0,247	0/1:16,7:23:99:242,0,481	0/1:8,2:10:99:103,0,164	0/0:15,0:14:7.77:0,8,337	0/0:32,0:31:12.59:0,13,872	0/0:16,0:16:38.69:0,39,643	0/0:15,0:15:18.06:0,18,252	0/0:18,0:18:15.56:0,16,186	0/1:13,9:22:99:118,0,380	0/1:27,0:26:25.88:26,0,521	0/1:22,0:22:99:145,0,579	0/1:11,6:17:84.86:85,0,419	0/1:5,5:10:99:181,0,141
chr10	10868410	.	AAGG	A	415.20	PASS	AB=0.869;AC=8;AF=0.143;AN=56;BaseQRankSum=6.578;DP=490;FS=0.000;HRun=0;HaplotypeScore=114.3457;InbreedingCoeff=-0.1538;MQ=50.39;MQ0=20;MQRankSum=-1.473;QD=3.03;ReadPosRankSum=4.595;VQSLOD=1.7173;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:19.05:0,19,290	0/0:6,0:6:14.92:0,15,143	0/1:17,0:4:8.57:9,0,75	0/1:33,0:6:5.71:6,0,73	0/1:22,0:22:9.06:9,0,379	0/0:22,0:22:54.18:0,54,1009	0/0:28,0:27:78.23:0,78,1232	0/0:13,0:9:24.08:0,24,336	0/0:19,0:19:54.17:0,54,1081	0/0:19,0:19:30.55:0,31,432	0/0:12,0:12:18.05:0,18,237	0/1:4,5:9:99:178,0,144	0/1:7,5:12:99:122,0,258	0/1:2,4:6:65.69:185,0,66	0/0:22,0:22:59.75:0,60,589	0/0:13,0:13:35.89:0,36,355	0/0:20,0:21:48.79:0,49,529	0/0:9,0:9:9.77:0,10,185	0/1:12,0:10:1.27:1,0,225	0/0:31,0:30:12.55:0,13,873	0/0:18,0:18:41.69:0,42,685	0/0:15,0:15:12.03:0,12,168	0/0:18,0:18:12.63:0,13,169	0/0:22,0:22:19.49:0,19,305	0/1:26,0:25:28.90:29,0,483	0/0:19,0:19:47.08:0,47,549	0/0:17,0:17:39.06:0,39,492	0/0:10,0:10:23.91:0,24,231
chr10	10868836	.	G	GGTGT	3750.38	PASS	AB=0.746;AC=30;AF=0.577;AN=52;BaseQRankSum=-4.018;DP=558;FS=0.000;HRun=0;HaplotypeScore=107.0171;InbreedingCoeff=0.1667;MQ=64.07;MQ0=4;MQRankSum=1.202;QD=9.26;ReadPosRankSum=-2.441;VQSLOD=2.2009;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:38:13.09:0,13,400	1/1:0,4:4:9.03:212,9,0	./.	./.	0/0:13,0:14:12.01:0,12,146	0/1:15,0:22:20.38:20,0,83	0/1:17,0:26:51.64:52,0,115	1/1:33,0:33:15.86:188,16,0	0/1:14,0:17:18.46:35,0,18	1/1:17,0:23:17.36:217,17,0	1/1:13,6:19:12.04:283,12,0	0/0:9,0:15:12.01:0,12,112	0/0:5,0:9:9.01:0,9,84	0/0:3,0:8:12.70:0,13,89	1/1:10,5:17:9.03:212,9,0	0/1:4,5:12:16.17:142,0,16	0/1:13,8:22:22.99:413,0,23	0/1:12,8:25:3.43:287,0,3	0/1:26,3:29:99:114,0,101	1/1:9,9:18:18.06:425,18,0	1/1:8,5:13:9.03:213,9,0	1/1:5,0:8:5.75:80,6,0	1/1:18,4:23:5.60:83,6,0	0/1:11,0:15:6.55:7,0,41	0/0:17,0:19:27.08:0,27,384	1/1:20,7:30:32.99:523,33,0	0/1:17,0:25:14.94:110,0,15	0/1:11,5:17:18.83:133,0,19
chr10	10869959	.	A	AC	882.34	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=6.287;DP=347;FS=4.097;HRun=1;HaplotypeScore=48.7033;InbreedingCoeff=0.9388;MQ=89.30;MQ0=0;MQRankSum=-1.811;QD=36.76;ReadPosRankSum=0.790;VQSLOD=3.7907;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:54.65:0,55,755	0/0:2,0:2:6.02:0,6,84	0/0:15,0:16:42.14:0,42,585	0/0:32,0:23:54.02:0,54,676	0/0:10,0:10:30.09:0,30,402	0/0:8,0:8:24.06:0,24,317	0/0:19,0:19:54.18:0,54,745	0/0:23,0:23:69.22:0,69,948	0/0:9,0:9:21.07:0,21,290	0/0:15,0:15:45.15:0,45,629	0/0:6,0:6:18.06:0,18,252	1/1:0,7:7:18.06:267,18,0	1/1:0,12:12:36.12:534,36,0	1/1:0,5:5:15.05:220,15,0	0/0:9,0:9:21.07:0,21,285	0/0:6,0:6:18.06:0,18,252	0/0:23,0:23:53.54:0,54,721	0/0:8,0:8:24.08:0,24,336	0/0:11,0:11:33.11:0,33,456	0/0:13,0:13:36.12:0,36,503	0/0:19,0:19:57.17:0,57,779	0/0:6,0:6:18.06:0,18,252	0/0:10,0:10:30.10:0,30,417	0/0:21,0:21:54.18:0,54,743	0/0:8,0:8:24.08:0,24,336	0/0:10,0:10:27.09:0,27,378	0/0:12,0:12:36.12:0,36,500	0/0:6,0:6:18.06:0,18,250
chr10	10871434	.	ATT	A	10175.23	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-3.302;DP=508;FS=36.925;HRun=12;HaplotypeScore=73.4485;InbreedingCoeff=0.9781;MQ=71.32;MQ0=2;MQRankSum=-5.944;QD=20.89;ReadPosRankSum=3.700;VQSLOD=1.6358;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,0:42:93.05:401,93,0	1/1:0,7:7:18.03:183,18,0	0/0:8,0:7:14.52:0,15,148	0/0:12,0:12:20.93:0,21,231	1/1:0,21:21:47.20:486,47,0	1/1:1,12:13:33.07:336,33,0	1/1:2,25:27:60.11:610,60,0	1/1:7,18:25:54.08:541,54,0	1/1:2,19:21:51.10:519,51,0	1/1:2,22:24:66.08:655,66,0	1/1:2,11:13:27.02:275,27,0	1/1:0,0:12:24.69:107,25,0	1/1:4,0:22:49.24:212,49,0	1/1:1,0:14:32.93:142,33,0	1/1:1,8:9:21.04:214,21,0	1/1:0,15:15:39.09:397,39,0	1/1:1,17:18:48.10:488,48,0	1/1:4,24:28:54.10:549,54,0	1/1:1,15:16:45.06:442,45,0	1/1:5,14:20:38.71:366,39,0	1/1:2,18:21:50.52:481,51,0	1/1:2,9:11:21:214,21,0	1/1:1,14:15:36.06:366,36,0	1/1:3,26:30:59.59:644,60,0	1/1:0,15:15:36.08:366,36,0	1/1:2,14:15:39.04:390,39,0	1/1:1,15:16:45.10:458,45,0	1/1:2,13:15:33.06:336,33,0
chr10	10871987	.	G	GT	5881.83	PASS	AB=0.846;AC=37;AF=0.661;AN=56;BaseQRankSum=-1.732;DP=546;FS=8.251;HRun=11;HaplotypeScore=72.6171;InbreedingCoeff=0.6902;MQ=71.79;MQ0=5;MQRankSum=-0.339;QD=15.81;ReadPosRankSum=0.957;VQSLOD=5.4161;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,1:36:47.12:0,47,534	1/1:5,0:5:3:29,3,0	0/0:15,0:14:2.24:0,2,60	0/1:12,0:9:0.72:1,0,38	1/1:8,18:28:36.54:515,37,0	0/0:23,0:23:49.82:0,50,377	0/0:20,0:20:50.78:0,51,395	0/1:34,3:38:45.13:45,0,417	0/0:22,0:23:52.81:0,53,400	1/1:1,17:18:41.76:407,42,0	1/1:2,10:12:27.05:271,27,0	1/1:2,0:13:17.04:86,17,0	1/1:8,2:9:15.94:112,16,0	1/1:5,0:9:11.52:63,12,0	1/1:3,11:14:27.61:243,28,0	1/1:5,16:20:18.91:361,19,0	1/1:11,28:42:39.60:858,40,0	1/1:6,18:23:24.86:434,25,0	0/0:15,1:15:1.65:0,2,184	0/0:23,0:23:59.61:0,60,453	0/0:18,0:18:47.82:0,48,371	1/1:2,14:16:38.99:381,39,0	1/1:4,17:22:38.90:380,39,0	1/1:5,19:25:33.71:509,34,0	1/1:3,4:6:6.01:61,6,0	1/1:6,17:23:54.07:537,54,0	1/1:1,20:20:21.86:403,22,0	0/1:4,7:10:10.83:186,0,11
chr10	10872213	.	TTC	T	560.77	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-2.632;DP=466;FS=3.513;HRun=0;HaplotypeScore=73.4620;InbreedingCoeff=0.7335;MQ=59.97;MQ0=19;MQRankSum=-1.703;QD=17.52;ReadPosRankSum=1.502;VQSLOD=3.6887;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:20,12:31:56.07:655,56,0	0/0:9,0:8:14.96:0,15,172	0/0:39,0:12:26.92:0,27,282	0/0:21,0:7:9.49:0,9,113	0/0:29,0:29:22.42:0,22,366	0/0:19,0:18:13.83:0,14,126	0/0:13,0:13:17.83:0,18,152	0/0:22,1:22:44.51:0,45,507	0/0:12,0:11:21.02:0,21,231	0/0:11,0:11:30.08:0,30,383	0/0:10,0:10:13.98:0,14,215	0/0:5,0:5:14.67:0,15,125	0/0:9,0:8:12.04:0,12,140	0/0:14,0:14:14.04:0,14,131	0/0:10,0:10:17.96:0,18,195	0/0:8,0:7:8.75:0,9,124	0/0:40,0:37:45.33:0,45,832	0/0:28,0:27:53.93:0,54,612	0/0:14,0:14:33.76:0,34,380	0/0:19,0:18:36.87:0,37,368	0/0:4,0:4:11.98:0,12,133	0/0:7,0:7:14.89:0,15,148	0/0:13,0:13:22.65:0,23,250	0/0:13,0:12:32.88:0,33,376	0/0:9,0:9:11.91:0,12,92	0/0:20,0:18:47.08:0,47,480	0/0:22,0:20:38.95:0,39,428	0/0:13,0:13:18:0,18,198
chr10	10872623	.	C	CT	6072.30	PASS	AB=0.864;AC=49;AF=0.875;AN=56;BaseQRankSum=-6.011;DP=447;FS=7.197;HRun=12;HaplotypeScore=58.1884;InbreedingCoeff=0.4030;MQ=66.01;MQ0=5;MQRankSum=-1.127;QD=14.85;ReadPosRankSum=2.044;VQSLOD=5.5884;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:64.82:0,65,459	1/1:1,7:9:23.87:219,24,0	0/0:7,0:6:2.04:0,2,29	0/1:9,0:8:0.03:0,0,0	1/1:10,13:25:26.34:219,26,0	1/1:3,18:22:38.80:351,39,0	1/1:5,4:9:9.01:88,9,0	1/1:10,18:27:35.20:494,35,0	1/1:7,3:8:11.94:104,12,0	0/1:11,8:18:3.55:188,0,4	1/1:4,11:16:7.96:206,8,0	1/1:2,14:16:8.09:231,8,0	0/1:7,1:7:12.90:49,0,13	1/1:5,6:11:26.83:238,27,0	1/1:1,6:8:20.87:189,21,0	1/1:5,9:13:2.13:182,2,0	1/1:3,28:31:69.11:671,69,0	1/1:6,22:25:38.16:525,38,0	1/1:6,9:17:10.87:226,11,0	1/1:1,12:13:33.02:312,33,0	1/1:4,9:13:9.01:88,9,0	1/1:6,0:6:3:29,3,0	1/1:3,6:10:18.20:161,18,0	1/1:1,1:2:3:29,3,0	1/1:5,16:21:39.53:380,40,0	1/1:9,16:25:20.15:352,20,0	1/1:6,11:17:33.47:305,33,0	1/1:8,13:21:25.28:236,25,0
chr10	10872993	.	TATA	T	1285.63	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.945;DP=566;FS=3.626;HRun=0;HaplotypeScore=108.3678;InbreedingCoeff=0.9911;MQ=78.95;MQ0=0;MQRankSum=-3.378;QD=29.90;ReadPosRankSum=1.591;VQSLOD=3.5652;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,42:43:81.28:1381,81,0	0/0:12,0:12:33.07:0,33,686	0/0:21,0:21:51.17:0,51,1110	0/0:12,0:12:33.11:0,33,710	0/0:24,0:24:48.16:0,48,1080	0/0:28,0:28:75.05:0,75,1482	0/0:19,0:19:57.20:0,57,1314	0/0:37,0:37:99:0,111,2514	0/0:19,0:19:57.20:0,57,1299	0/0:27,0:27:63.22:0,63,1410	0/0:18,0:16:39.12:0,39,853	0/0:17,0:16:48.16:0,48,1106	0/0:14,0:14:42.14:0,42,965	0/0:16,0:16:48.16:0,48,1101	0/0:22,0:22:51.13:0,51,1096	0/0:20,0:20:54.15:0,54,1195	0/0:26,0:26:78.27:0,78,1730	0/0:15,0:15:39.10:0,39,836	0/0:18,0:17:48.16:0,48,1104	0/0:21,0:21:54.19:0,54,1207	0/0:21,0:21:48.06:0,48,963	0/0:17,0:17:42.13:0,42,923	0/0:22,0:21:54.18:0,54,1207	0/0:17,0:17:42.13:0,42,904	0/0:12,0:12:36.12:0,36,806	0/0:22,0:21:54.19:0,54,1219	0/0:17,0:17:39.09:0,39,849	0/0:9,0:9:18.06:0,18,415
chr10	10873051	.	ATTCC	A	11505.85	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=17.551;DP=484;FS=8.353;HRun=0;HaplotypeScore=142.6043;InbreedingCoeff=0.9904;MQ=93.53;MQ0=0;MQRankSum=-15.506;QD=53.52;ReadPosRankSum=4.934;VQSLOD=5.6789;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,144,4027	1/1:0,6:5:12.04:251,12,0	0/0:28,0:28:84.29:0,84,2303	0/0:29,0:29:81.28:0,81,2162	0/0:25,0:25:60.21:0,60,1625	0/0:23,0:22:66.23:0,66,1815	0/0:21,0:21:63.20:0,63,1642	1/1:0,19:19:57.18:1141,57,0	0/0:18,0:18:54.19:0,54,1507	1/1:0,16:16:33.11:690,33,0	1/1:0,13:8:18.06:345,18,0	0/0:19,0:18:51.18:0,51,1478	0/0:16,0:16:48.16:0,48,1373	0/0:16,0:16:48.16:0,48,1351	1/1:0,18:18:54.19:1128,54,0	1/1:0,14:14:39.13:814,39,0	1/1:0,17:17:48.16:1003,48,0	1/1:1,8:9:21.07:439,21,0	1/1:0,9:9:27.08:528,27,0	1/1:0,13:12:36.12:751,36,0	1/1:0,10:10:15.05:313,15,0	1/1:0,11:11:24.08:501,24,0	1/1:0,9:8:24.08:501,24,0	1/1:0,9:9:27.09:531,27,0	0/0:19,0:19:57.20:0,57,1652	1/1:0,19:19:57.20:1191,57,0	1/1:0,15:15:42.14:878,42,0	1/1:0,8:8:24.08:502,24,0
chr10	10874311	.	CT	C	1476.58	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=5.027;DP=585;FS=2.727;HRun=1;HaplotypeScore=60.4198;InbreedingCoeff=0.9978;MQ=77.49;MQ0=1;MQRankSum=-1.828;QD=20.80;ReadPosRankSum=-0.779;VQSLOD=3.5563;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,105,1406	0/0:9,0:9:24.08:0,24,334	0/0:28,0:27:67.98:0,68,866	0/0:16,0:15:27.96:0,28,365	0/0:24,0:24:69.20:0,69,926	1/1:0,23:23:30.10:418,30,0	1/1:1,21:22:23.99:310,24,0	0/0:24,0:24:54.11:0,54,694	1/1:12,14:26:74.98:891,75,0	0/0:21,0:21:63.18:0,63,827	0/0:16,0:16:48.16:0,48,669	0/0:18,0:18:51.14:0,51,677	0/0:12,0:12:36.12:0,36,501	0/0:19,0:19:57.18:0,57,777	0/0:23,0:23:69.20:0,69,929	0/0:20,0:20:60.18:0,60,818	0/0:26,0:26:78.15:0,78,993	0/0:18,0:18:54.16:0,54,734	0/0:13,0:13:39.12:0,39,530	0/0:23,0:23:66.11:0,66,841	0/0:35,0:35:99:0,105,1412	0/0:14,0:14:42.12:0,42,554	0/0:22,0:22:66.21:0,66,902	0/0:28,0:28:81.20:0,81,1058	0/0:22,0:22:63.16:0,63,829	0/0:18,0:18:54.13:0,54,688	0/0:20,0:19:57.17:0,57,791	0/0:10,0:10:30.10:0,30,418
chr10	10875171	.	G	GTC	331.58	PASS	AB=1.000;AC=21;AF=0.477;AN=44;BaseQRankSum=0.650;DP=639;FS=3.015;HRun=0;HaplotypeScore=103.4430;InbreedingCoeff=0.0909;MQ=66.40;MQ0=21;MQRankSum=-2.087;QD=1.12;ReadPosRankSum=-2.927;VQSLOD=1.6020;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:42,0:42:2.99:24,3,0	./.	./.	./.	0/0:20,0:20:5.98:0,6,48	0/1:20,0:20:12.89:13,0,13	0/0:33,0:31:8.64:0,9,56	./.	0/0:28,0:28:6.31:0,6,36	1/1:26,0:25:18.22:124,18,0	1/1:8,0:8:2.04:6,2,0	0/0:18,0:18:15.82:0,16,123	0/0:11,0:11:1.62:0,2,110	0/0:12,0:11:2.96:0,3,23	0/1:25,0:23:16.49:18,0,16	1/1:19,0:16:4.81:30,5,0	1/1:21,7:28:6.28:27,6,0	0/1:11,0:11:11.31:33,0,11	0/0:19,0:20:2.80:0,3,13	./.	./.	0/1:18,0:17:16.30:16,0,17	1/1:14,0:14:2.99:28,3,0	1/1:18,0:17:2.99:24,3,0	0/0:15,0:15:5.99:0,6,48	0/1:30,0:28:55.75:85,0,56	0/1:27,0:26:16.83:39,0,17	0/1:9,0:8:2.04:2,0,18
chr10	10875211	.	C	CTGTGTG	1382.03	PASS	AB=0.977;AC=13;AF=0.232;AN=56;BaseQRankSum=4.562;DP=592;FS=26.550;HRun=0;HaplotypeScore=127.4455;InbreedingCoeff=-0.1859;MQ=47.95;MQ0=26;MQRankSum=-2.515;QD=5.78;ReadPosRankSum=-1.576;VQSLOD=0.4828;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:18.06:0,18,285	1/1:5,0:5:3.76:18,4,0	0/0:20,0:5:12.04:0,12,211	0/1:26,0:6:10.97:11,0,73	0/0:17,0:17:14.71:0,15,229	0/0:28,0:28:18.06:0,18,379	0/0:28,0:25:12:0,12,260	0/0:29,0:27:71.83:0,72,1232	0/0:31,0:29:12.04:0,12,277	0/1:16,8:22:99:378,0,544	0/0:15,0:15:3:0,3,50	0/1:24,0:23:55.42:55,0,227	0/1:15,0:15:28.75:29,0,180	0/0:17,0:16:10.93:0,11,77	0/0:23,0:21:5.97:0,6,132	0/1:21,0:18:8.16:8,0,43	0/1:27,0:26:99:252,0,166	0/1:10,0:10:99:130,0,250	0/0:20,0:19:40.22:0,40,720	0/0:8,0:8:9.03:0,9,191	0/0:27,0:26:26.99:0,27,475	0/0:24,0:23:4.23:0,4,53	0/0:11,0:11:2.97:0,3,21	0/1:20,0:19:8.68:9,0,43	0/0:20,0:20:12.43:0,12,191	0/1:32,0:31:99:596,0,926	0/1:29,0:28:2.47:2,0,363	0/1:6,0:3:37.27:37,0,136
chr10	10875215	.	C	CTG	1394.39	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=8.791;DP=612;FS=36.434;HRun=0;HaplotypeScore=115.1326;InbreedingCoeff=0.2887;MQ=48.23;MQ0=25;MQRankSum=1.060;QD=4.05;ReadPosRankSum=4.816;VQSLOD=0.6948;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:5.14:0,5,29	1/1:5,0:5:5.90:40,6,0	0/0:31,0:11:14.77:0,15,100	0/0:26,0:7:8.03:0,8,110	0/1:18,0:18:78.55:117,0,79	0/1:26,0:26:23.35:23,0,31	0/0:28,0:26:9.15:0,9,88	0/0:32,0:30:57.46:0,57,443	0/1:33,0:31:14.51:15,0,53	0/1:25,0:23:86.70:148,0,87	1/1:15,0:15:2.03:6,2,0	1/1:21,0:20:21.81:245,22,0	1/1:14,0:14:8.14:148,8,0	1/1:17,0:16:12.03:110,12,0	0/0:24,0:22:3.28:0,3,42	1/1:21,0:18:0.42:0,0,0	0/1:27,0:26:0.27:81,0,0	1/1:10,0:10:0.83:49,1,0	0/0:22,0:21:53.86:0,54,338	0/0:9,0:9:9.74:0,10,59	0/0:33,0:32:32.58:0,33,219	1/1:5,20:24:1.98:45,2,0	1/1:12,0:12:4.23:26,4,0	1/1:20,0:19:0.17:1,0,0	1/1:18,0:18:26.52:241,27,0	0/1:31,0:30:99:259,0,221	0/0:28,0:28:9.21:0,9,88	0/1:6,0:3:9.04:9,0,52
chr10	10875217	.	C	CTGTGTGTGTGTG	4990.92	PASS	AB=0.840;AC=36;AF=0.643;AN=56;BaseQRankSum=-1.928;DP=650;FS=1.316;HRun=0;HaplotypeScore=169.5365;InbreedingCoeff=0.2476;MQ=49.14;MQ0=24;MQRankSum=-0.987;QD=10.02;ReadPosRankSum=2.166;VQSLOD=3.8572;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:34:3.01:0,3,47	1/1:5,0:5:6.02:128,6,0	0/0:34,0:12:26.36:0,26,473	0/0:27,0:8:14.62:0,15,346	0/1:18,0:18:48.05:49,0,48	0/1:4,0:25:36.96:37,0,146	1/1:11,0:27:0.47:1,0,0	0/1:34,0:32:30.11:30,0,634	1/1:10,0:32:3:25,3,0	1/1:25,0:23:39.10:1129,39,0	1/1:18,0:18:2.99:24,3,0	0/1:23,0:22:7.16:145,0,7	0/1:14,0:14:7.94:90,0,8	1/1:17,0:16:9.28:34,9,0	1/1:6,16:27:0.47:1,0,0	0/0:6,13:21:1.53:0,2,3	1/1:27,0:26:27.98:792,28,0	1/1:6,4:13:11.99:286,12,0	0/0:23,0:22:8.76:0,9,361	0/0:9,0:9:12.03:0,12,229	0/1:34,0:33:12.94:13,0,541	1/1:25,0:24:5.82:54,6,0	1/1:18,0:18:5.99:68,6,0	0/1:8,1:21:0.01:1,0,0	1/1:17,0:17:0.33:184,0,0	1/1:12,17:35:66.19:1798,66,0	0/1:7,15:30:0:0,0,0	1/1:5,0:3:3.01:102,3,0
chr10	10875547	.	C	CAG	1494.29	PASS	AB=0.974;AC=17;AF=0.304;AN=56;BaseQRankSum=5.363;DP=706;FS=4.163;HRun=0;HaplotypeScore=226.9102;InbreedingCoeff=0.1816;MQ=43.00;MQ0=29;MQRankSum=-2.270;QD=4.43;ReadPosRankSum=-0.236;VQSLOD=2.6636;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:45:11.75:0,12,179	0/0:6,0:6:13.26:0,13,96	1/1:13,0:1:2.04:6,2,0	0/0:27,0:8:14.89:0,15,120	0/1:25,3:27:2.10:122,0,2	0/1:33,0:32:31.87:32,0,173	0/1:32,0:32:18.03:18,0,180	0/0:37,0:28:14.51:0,15,263	0/1:37,0:36:99:118,0,172	0/1:17,0:16:24.36:24,0,258	0/0:12,0:11:0.86:0,1,21	1/1:28,4:32:14.87:411,15,0	0/1:17,2:19:3.87:194,0,4	1/1:26,4:29:42.21:417,42,0	0/1:24,1:25:41.43:41,0,68	0/0:24,0:22:24.50:0,25,194	0/0:29,0:28:20.12:0,20,167	0/0:23,0:22:42.38:0,42,320	0/1:31,0:28:36.08:36,0,240	0/1:21,0:21:21.33:21,0,45	0/0:35,0:31:8.92:0,9,68	1/1:16,3:18:23.04:222,23,0	0/0:12,0:12:14.96:0,15,124	0/0:45,0:44:82.38:0,82,611	0/0:14,0:14:2.50:0,2,19	0/0:26,0:24:38.34:0,38,361	0/0:26,0:26:42.97:0,43,369	0/0:3,0:3:3:0,3,26
chr10	10875549	.	C	CAGAT	3437.86	PASS	AB=0.993;AC=28;AF=0.500;AN=56;BaseQRankSum=3.300;DP=695;FS=0.000;HRun=0;HaplotypeScore=233.3844;InbreedingCoeff=-0.2725;MQ=42.25;MQ0=27;MQRankSum=-0.541;QD=6.34;ReadPosRankSum=0.877;VQSLOD=2.3668;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:49,0:45:22.38:46,0,22	0/1:6,0:6:13.79:121,0,14	0/0:12,0:2:5.93:0,6,65	0/0:25,0:8:18.53:0,19,282	1/1:25,3:27:9.03:321,9,0	0/1:29,3:31:64.40:255,0,64	0/1:33,0:33:80.80:139,0,81	0/1:37,0:28:26.45:26,0,366	0/1:35,1:35:46.90:307,0,47	0/1:17,0:16:43.60:44,0,216	0/1:12,0:11:26.73:54,0,27	0/1:31,0:31:13.23:370,0,13	1/1:18,0:18:0.45:142,0,0	1/1:31,0:30:26.51:356,27,0	0/1:24,0:24:30.31:47,0,30	0/0:24,0:22:2.75:0,3,152	0/1:26,0:26:18.01:24,0,18	0/1:22,0:21:99:299,0,156	0/1:31,0:28:99:116,0,308	0/1:22,0:22:65.73:73,0,66	0/0:35,0:31:12.44:0,12,116	1/1:19,0:18:12.49:157,12,0	0/0:12,0:12:8.06:0,8,68	0/0:45,0:44:53.66:0,54,677	1/1:10,3:14:6.02:110,6,0	0/1:25,0:23:99:231,0,187	0/1:25,0:25:99:186,0,127	1/1:3,0:3:2.80:13,3,0
chr10	10875553	.	CACAGAT	C	4977.35	PASS	AB=0.965;AC=37;AF=0.661;AN=56;BaseQRankSum=-0.300;DP=678;FS=12.959;HRun=0;HaplotypeScore=231.3644;InbreedingCoeff=-0.2785;MQ=42.18;MQ0=27;MQRankSum=1.993;QD=7.72;ReadPosRankSum=0.019;VQSLOD=2.2546;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:43,1:40:16.60:17,0,65	0/1:8,0:8:5.83:66,0,6	0/0:14,0:3:9.03:0,9,152	0/0:19,0:7:18.01:0,18,248	0/1:28,0:27:43.30:146,0,43	0/1:30,0:29:69.40:69,0,75	0/1:30,0:30:22.87:151,0,23	0/1:38,0:29:99:625,0,111	0/1:34,0:33:40.58:358,0,41	0/1:15,1:14:4.76:119,0,5	1/1:15,0:14:3.40:20,3,0	0/1:27,3:30:67.50:347,0,68	0/1:13,4:17:16.72:377,0,17	0/1:25,4:28:7.11:479,0,7	1/1:25,0:25:3.51:61,4,0	1/1:25,2:25:21.06:169,21,0	0/1:26,1:26:2.33:166,0,2	1/1:23,0:22:4.81:193,5,0	0/1:31,0:27:99:341,0,216	0/1:22,0:22:62.31:62,0,139	1/1:33,0:29:9.01:110,9,0	1/1:17,2:18:0.17:283,0,0	1/1:11,0:11:7.31:25,7,0	0/1:43,0:42:43.32:106,0,43	1/1:12,1:13:2.74:12,3,0	1/1:25,0:23:5.12:253,5,0	1/1:20,4:24:35.72:398,36,0	1/1:3,0:3:2.99:23,3,0
chr10	10875555	.	CAGAT	C	6238.04	PASS	AB=0.920;AC=43;AF=0.768;AN=56;BaseQRankSum=1.429;DP=673;FS=13.188;HRun=0;HaplotypeScore=213.0379;InbreedingCoeff=0.0229;MQ=42.72;MQ0=29;MQRankSum=1.748;QD=9.76;ReadPosRankSum=2.988;VQSLOD=3.2316;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:40,1:37:21.40:21,0,41	1/1:3,4:7:15.25:216,15,0	0/0:15,0:3:9.03:0,9,152	0/0:19,0:10:27.04:0,27,415	1/1:26,1:26:3.35:163,3,0	0/1:28,1:28:5.28:100,0,5	1/1:28,2:30:5.15:189,5,0	0/1:38,0:29:99:633,0,138	0/1:34,0:33:18.30:370,0,18	1/1:16,1:15:17.70:180,18,0	1/1:14,2:15:3.38:20,3,0	1/1:28,0:28:34.06:353,34,0	1/1:17,0:17:12.72:346,13,0	1/1:29,0:28:35.84:504,36,0	1/1:21,6:27:9.03:129,9,0	1/1:24,3:25:21.40:219,21,0	0/1:9,18:26:12.91:229,0,13	1/1:17,6:23:36.99:454,37,0	0/1:29,2:27:99:408,0,203	0/1:21,0:21:69.38:69,0,82	1/1:33,0:29:9.01:110,9,0	1/1:18,1:18:20.62:240,21,0	1/1:10,1:11:7.95:43,8,0	0/1:38,2:39:20.45:178,0,20	1/1:14,0:14:2.74:12,3,0	0/1:23,5:26:1.62:427,0,2	1/1:15,7:22:44.66:568,45,0	1/1:0,3:3:3.01:59,3,0
chr10	10875557	.	GATACAC	G	4199.10	PASS	AB=0.918;AC=26;AF=0.464;AN=56;BaseQRankSum=0.778;DP=665;FS=0.433;HRun=0;HaplotypeScore=229.4410;InbreedingCoeff=-0.2410;MQ=42.71;MQ0=29;MQRankSum=-2.456;QD=8.09;ReadPosRankSum=1.349;VQSLOD=2.2425;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:37:16.05:0,16,121	0/1:7,0:7:0.92:1,0,55	0/0:18,0:4:12.04:0,12,294	0/0:19,0:10:27.09:0,27,661	0/1:20,7:26:21.04:182,0,21	0/1:25,4:28:51.17:51,0,110	0/1:26,5:31:99:261,0,107	0/1:20,18:29:99:893,0,122	0/1:25,7:31:55.87:499,0,56	0/1:21,0:19:10.98:11,0,242	0/0:15,0:14:8.97:0,9,71	0/1:23,4:27:8.14:358,0,8	0/1:14,3:17:0.77:342,0,1	1/1:24,5:28:21.66:525,22,0	0/1:26,0:26:7.70:8,0,109	0/1:27,0:25:37.67:38,0,81	0/1:27,0:26:7.39:89,0,7	0/1:22,0:21:5.18:5,0,99	0/1:20,8:24:99:428,0,263	0/1:20,0:20:24.20:24,0,139	1/1:24,4:24:5.96:44,6,0	1/1:15,4:18:13.87:251,14,0	0/1:11,0:11:6.51:7,0,32	0/0:39,0:38:54.07:0,54,423	0/0:6,8:14:2.68:0,3,11	0/1:28,0:26:11.02:11,0,226	0/1:22,0:22:40.79:169,0,41	1/1:3,0:3:1.55:4,2,0
chr10	10875559	.	T	TAC	6432.60	PASS	AB=0.914;AC=46;AF=0.852;AN=54;BaseQRankSum=-0.970;DP=693;FS=10.206;HRun=0;HaplotypeScore=209.6428;InbreedingCoeff=0.4452;MQ=43.24;MQ0=27;MQRankSum=-1.252;QD=10.07;ReadPosRankSum=2.607;VQSLOD=3.7475;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:39,5:41:6.24:55,0,6	1/1:5,4:9:15.45:185,15,0	0/0:20,0:4:12.04:0,12,152	0/0:21,0:13:29.87:0,30,336	1/1:26,1:26:8.81:73,9,0	1/1:26,5:30:14.98:117,15,0	1/1:24,8:32:7.41:93,7,0	1/1:33,5:29:8.39:228,8,0	1/1:26,6:31:14.58:135,15,0	1/1:6,15:20:45.12:638,45,0	1/1:4,13:16:9.03:150,9,0	0/1:24,3:27:20.91:153,0,21	0/1:16,1:17:0.14:112,0,0	1/1:28,0:27:11.25:148,11,0	1/1:11,16:27:21.05:321,21,0	1/1:8,19:25:30.09:442,30,0	1/1:24,3:26:14.96:146,15,0	1/1:9,14:22:36.11:510,36,0	1/1:28,5:30:23.63:388,24,0	1/1:20,0:20:12.48:53,12,0	0/1:29,3:28:0:0,0,0	1/1:18,0:18:12.50:94,13,0	1/1:5,6:11:9.03:138,9,0	1/1:22,19:40:28.06:963,28,0	./.	1/1:13,15:27:57.05:796,57,0	1/1:15,8:24:41.02:460,41,0	1/1:3,0:3:3.01:35,3,0
chr10	10875563	.	C	CACACACACAG	9296.38	PASS	AB=0.918;AC=32;AF=0.593;AN=54;BaseQRankSum=-4.480;DP=700;FS=0.000;HRun=0;HaplotypeScore=259.3550;InbreedingCoeff=0.2555;MQ=44.28;MQ0=25;MQRankSum=-4.232;QD=16.57;ReadPosRankSum=-3.941;VQSLOD=2.7734;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:19,22:44:10.97:43,0,11	0/1:9,0:9:2.09:2,0,114	0/0:25,0:7:18.05:0,18,341	0/0:26,0:18:40.12:0,40,771	1/1:26,0:25:18.04:492,18,0	1/1:29,0:28:21.37:594,21,0	1/1:31,0:31:27.08:574,27,0	1/1:38,0:29:67.50:1312,68,0	1/1:30,0:31:36.53:1042,37,0	0/1:21,0:20:99:195,0,166	0/0:17,0:16:8.97:0,9,71	1/1:26,0:26:41.91:1004,42,0	1/1:17,0:17:31.16:482,31,0	1/1:25,0:24:32.56:810,33,0	0/0:28,0:28:5.21:0,5,179	0/1:29,0:27:13.50:13,0,294	0/0:27,0:26:20.37:0,20,297	0/1:23,0:22:99:204,0,101	1/1:32,1:32:78.79:1507,79,0	0/1:4,13:21:0.01:0,0,0	1/1:32,0:28:8.91:62,9,0	1/1:17,0:18:21.03:398,21,0	0/1:11,0:11:17.62:79,0,18	0/1:41,0:40:99:264,0,405	./.	0/1:28,0:26:99:124,0,287	0/1:23,0:23:93.68:94,0,438	0/0:3,0:3:2.96:0,3,19
chr10	10876195	.	GAC	G	1761.79	PASS	AB=0.987;AC=22;AF=0.393;AN=56;BaseQRankSum=-7.434;DP=604;FS=9.716;HRun=0;HaplotypeScore=127.7530;InbreedingCoeff=0.2637;MQ=59.72;MQ0=6;MQRankSum=6.940;QD=5.11;ReadPosRankSum=5.315;VQSLOD=2.2587;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:39,1:40:20.73:297,0,21	0/1:9,0:9:17.50:18,0,21	0/0:8,0:6:9.64:0,10,117	0/0:15,0:4:8.83:0,9,91	0/0:23,0:24:12.80:0,13,92	1/1:25,1:26:8.53:130,9,0	0/1:22,0:21:5.17:99,0,5	0/0:29,0:24:51.97:0,52,228	1/1:20,1:20:23.80:185,24,0	0/1:22,0:22:69.80:82,0,70	0/1:14,1:14:34.56:129,0,35	0/0:21,0:19:32.82:0,33,124	0/0:21,0:21:26.61:0,27,118	0/0:18,0:17:34.22:0,34,187	0/1:28,0:28:4.54:109,0,5	0/1:17,0:16:14.09:57,0,14	1/1:37,0:37:33.11:237,33,0	0/1:17,0:17:38.05:38,0,56	0/0:16,0:12:32.53:0,33,155	0/0:32,0:34:34.38:0,34,230	0/0:32,0:32:68.81:0,69,311	0/0:16,0:16:27.89:0,28,115	0/1:19,1:20:61.44:89,0,61	1/1:19,0:19:16.47:129,16,0	0/0:24,0:24:20.22:0,20,121	1/1:18,1:18:11.50:149,11,0	0/1:13,0:13:21.82:54,0,22	1/1:19,0:19:41.69:151,42,0
chr10	10876196	.	ACC	A	9845.03	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-2.592;DP=599;FS=1.837;HRun=11;HaplotypeScore=101.3340;InbreedingCoeff=0.7707;MQ=59.75;MQ0=6;MQRankSum=0.179;QD=17.06;ReadPosRankSum=2.086;VQSLOD=3.9850;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,34:40:94.07:991,94,0	1/1:3,6:9:11.96:128,12,0	0/0:7,0:5:3.24:0,3,29	0/0:15,0:4:3.01:0,3,38	1/1:2,0:24:55.28:251,55,0	1/1:4,22:26:51.09:543,51,0	1/1:2,19:20:45.11:479,45,0	1/1:3,0:24:53.02:232,53,0	1/1:2,18:20:51.12:543,51,0	1/1:5,17:22:51.11:543,51,0	1/1:3,11:15:27.04:343,27,0	1/1:0,0:19:41.13:180,41,0	1/1:3,0:21:43.91:192,44,0	1/1:4,0:16:24.69:108,25,0	1/1:3,24:28:59.87:616,60,0	1/1:2,13:16:27.01:343,27,0	1/1:2,35:37:93.23:990,93,0	1/1:3,13:16:24.04:255,24,0	1/1:5,0:13:30.12:130,30,0	1/1:9,0:34:63.96:288,64,0	1/1:5,0:32:63.11:275,63,0	1/1:1,0:16:27.45:120,27,0	1/1:4,15:19:32.61:350,33,0	1/1:1,17:19:48.08:499,48,0	1/1:1,0:24:46.66:203,47,0	1/1:5,14:18:45.10:479,45,0	1/1:2,11:13:21.04:223,21,0	1/1:0,19:19:51.13:543,51,0
chr10	10876756	.	G	GAA	4160.50	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-8.242;DP=695;FS=0.834;HRun=10;HaplotypeScore=86.4223;InbreedingCoeff=0.9966;MQ=73.72;MQ0=2;MQRankSum=2.038;QD=28.30;ReadPosRankSum=0.069;VQSLOD=3.8317;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:42:99:0,108,1071	0/0:12,0:12:30.06:0,30,305	0/0:12,0:14:17.45:0,17,142	0/0:11,0:11:19.39:0,19,165	1/1:5,18:23:49.13:672,49,0	0/0:19,0:20:35.79:0,36,418	0/0:38,0:39:98.81:0,99,988	0/0:18,0:18:39.01:0,39,386	0/0:30,0:30:75.13:0,75,763	0/0:26,0:26:63.12:0,63,637	0/0:23,0:25:44.41:0,44,610	1/1:3,23:27:57.19:834,57,0	1/1:2,18:20:45.15:671,45,0	1/1:2,18:23:44.59:594,45,0	0/0:25,0:25:69.15:0,69,702	0/0:24,0:24:63.14:0,63,641	0/0:33,0:37:74.29:0,74,840	0/0:19,0:19:51.08:0,51,519	0/0:20,0:22:41.53:0,42,461	0/0:38,0:39:92.99:0,93,998	0/0:15,0:15:36.06:0,36,366	1/1:6,29:36:66.17:943,66,0	0/0:27,0:27:62.64:0,63,621	0/0:27,0:26:72.14:0,72,732	1/1:2,15:16:30.10:447,30,0	0/0:25,0:25:60.09:0,60,610	0/0:35,0:36:86.89:0,87,859	0/0:15,0:15:36.06:0,36,366
chr10	10877505	.	TAC	T	1273.28	PASS	AB=0.878;AC=12;AF=0.214;AN=56;BaseQRankSum=4.999;DP=423;FS=13.483;HRun=0;HaplotypeScore=74.9486;InbreedingCoeff=0.4391;MQ=54.85;MQ0=7;MQRankSum=3.089;QD=11.58;ReadPosRankSum=0.388;VQSLOD=2.1275;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:19:8.55:0,9,116	0/1:4,2:6:78.64:89,0,79	0/1:36,0:15:2.97:3,0,68	0/0:32,0:12:9.29:0,9,139	0/0:19,0:19:49.68:0,50,703	0/0:12,0:16:8.05:0,8,35	0/0:10,0:10:2.73:0,3,44	0/0:24,0:23:18.06:0,18,235	0/0:2,0:5:8.75:0,9,82	0/0:9,0:9:21.07:0,21,328	0/0:4,0:4:6.02:0,6,94	1/1:1,9:10:27.08:314,27,0	1/1:2,9:11:29.92:328,30,0	1/1:2,6:7:21.06:244,21,0	0/0:5,0:5:12.04:0,12,187	0/1:9,2:11:36.57:37,0,387	0/0:27,0:27:24.12:0,24,748	0/0:16,1:16:10.31:0,10,615	0/0:15,0:18:28.31:0,28,325	0/0:17,0:25:25.78:0,26,184	0/0:12,0:12:2.99:0,3,24	1/1:3,13:16:36.11:418,36,0	0/0:13,1:14:4.29:0,4,509	0/0:8,0:8:24.08:0,24,375	0/1:10,1:11:4.74:5,0,376	0/0:14,1:16:7.29:0,7,554	0/0:8,0:8:17.13:0,17,279	0/0:21,2:23:1.27:0,1,454
chr10	10877771	.	G	GGCCTT	10920.26	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-8.757;DP=776;FS=3.083;HRun=0;HaplotypeScore=135.2820;InbreedingCoeff=0.9981;MQ=86.91;MQ0=0;MQRankSum=-11.155;QD=77.45;ReadPosRankSum=-3.944;VQSLOD=5.3799;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:61,0:61:99:0,184,4116	0/0:9,0:9:24.08:0,24,534	0/0:33,0:33:96.25:0,96,2013	0/0:24,0:24:65.37:0,65,1262	0/0:20,0:20:60.21:0,60,1381	0/0:24,0:23:69.12:0,69,1378	0/0:25,0:25:75.21:0,75,1605	1/1:11,22:46:99:3989,135,0	0/0:33,0:33:99:0,99,2163	0/0:26,0:26:78.24:0,78,1686	0/0:14,0:14:42.14:0,42,947	0/0:32,0:32:96.27:0,96,2022	0/0:32,0:31:90.27:0,90,1964	0/0:26,0:26:78.27:0,78,1790	0/0:43,0:43:99:0,126,2801	0/0:28,0:28:84.23:0,84,1764	0/0:29,0:29:87.22:0,87,1874	0/0:28,0:28:84.24:0,84,1854	1/1:3,16:22:66.21:2000,66,0	1/1:1,15:17:45.11:1416,45,0	1/1:7,45:55:99:3516,126,0	0/0:10,0:10:30.10:0,30,698	0/0:7,0:7:21.07:0,21,460	0/0:46,0:46:99:0,132,2951	0/0:12,0:11:36.12:0,36,839	0/0:28,0:28:81.28:0,81,1853	0/0:25,0:25:75.24:0,75,1700	0/0:20,0:20:60.17:0,60,1305
chr10	10879420	.	T	TA	5118.45	PASS	AB=0.775;AC=28;AF=0.500;AN=56;BaseQRankSum=-6.074;DP=526;FS=0.373;HRun=10;HaplotypeScore=55.6904;InbreedingCoeff=0.8581;MQ=72.52;MQ0=5;MQRankSum=-0.299;QD=18.35;ReadPosRankSum=-0.116;VQSLOD=5.1422;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,26:29:41.49:634,41,0	0/0:5,0:5:8.99:0,9,74	0/1:35,0:21:9.67:10,0,179	0/0:28,0:18:7.89:0,8,213	1/1:8,19:28:35.30:545,35,0	1/1:1,22:22:57.08:591,57,0	1/1:3,6:9:12.03:126,12,0	1/1:11,16:27:42.06:429,42,0	1/1:1,10:11:18.05:192,18,0	0/0:30,0:30:80.81:0,81,648	0/0:23,0:23:50.91:0,51,416	0/1:2,9:11:3.59:171,0,4	1/1:1,8:9:18.57:248,19,0	1/1:3,11:14:21.05:224,21,0	0/0:6,0:6:17.98:0,18,148	0/0:12,0:12:20.93:0,21,169	0/0:28,0:28:74.85:0,75,609	0/0:17,0:18:37.73:0,38,289	1/1:1,13:14:36.04:371,36,0	1/1:7,24:32:68.95:703,69,0	1/1:2,9:11:24.06:256,24,0	1/1:1,14:14:36.05:372,36,0	0/0:21,0:21:44.90:0,45,363	0/0:22,0:22:56.93:0,57,468	1/1:4,7:11:24.05:248,24,0	0/0:17,0:17:41.93:0,42,345	0/0:27,0:28:70.90:0,71,567	0/0:9,0:9:20.93:0,21,169
chr10	10879525	.	C	CCA	683.38	PASS	AB=0.735;AC=13;AF=0.232;AN=56;BaseQRankSum=6.134;DP=500;FS=4.021;HRun=0;HaplotypeScore=96.5024;InbreedingCoeff=-0.1670;MQ=59.40;MQ0=19;MQRankSum=2.310;QD=3.09;ReadPosRankSum=-0.721;VQSLOD=1.8042;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:17,0:22:39.57:40,0,76	0/0:1,0:7:5.34:0,5,54	0/0:14,0:7:2.21:0,2,8	0/1:11,0:9:16.76:17,0,57	0/1:14,0:30:95.78:205,0,96	0/1:9,0:19:56.14:147,0,56	0/1:6,0:12:59:71,0,59	0/1:10,0:24:23.17:23,0,160	1/1:2,1:10:5.28:89,5,0	0/1:17,0:24:18.95:19,0,286	0/0:6,0:11:24.95:0,25,207	0/0:3,0:7:1.17:0,1,44	0/1:6,0:5:9.48:9,0,42	0/1:9,0:16:75.02:76,0,75	0/0:12,0:18:48.88:0,49,421	0/0:7,0:13:32.56:0,33,276	0/0:10,0:35:39.53:0,40,290	0/0:9,0:23:30.13:0,30,235	0/0:14,0:12:12.52:0,13,192	0/0:16,0:22:38:0,38,303	0/0:8,0:10:20.38:0,20,202	0/1:13,0:21:50.74:51,0,121	0/0:8,0:17:22.40:0,22,205	0/0:7,0:17:32.79:0,33,166	0/1:8,0:17:53.60:88,0,54	0/0:8,0:25:19.02:0,19,340	0/0:12,0:19:43.72:0,44,364	0/0:8,0:12:13.64:0,14,242
chr10	10879574	.	T	TA	1260.66	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-0.679;DP=481;FS=6.152;HRun=11;HaplotypeScore=76.2803;InbreedingCoeff=0.8473;MQ=67.96;MQ0=0;MQRankSum=-2.889;QD=16.81;ReadPosRankSum=-3.160;VQSLOD=3.2784;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,1:29:35.28:0,35,452	0/0:11,0:11:19.90:0,20,160	0/0:14,0:14:5.30:0,5,118	0/0:10,0:9:0.37:0,0,44	0/0:33,0:33:74.35:0,74,594	0/0:13,0:13:23.88:0,24,186	0/0:12,0:12:24.79:0,25,187	1/1:4,20:23:30.83:476,31,0	0/0:12,0:12:20.88:0,21,162	0/0:23,0:23:47.78:0,48,371	0/0:13,0:13:26.37:0,26,207	0/0:4,0:4:8.96:0,9,70	0/0:7,0:7:20.89:0,21,158	0/0:13,0:13:23.86:0,24,186	0/0:21,0:22:52.81:0,53,400	0/0:9,0:9:15.79:0,16,118	0/0:26,0:25:44.39:0,44,345	0/0:21,0:21:38.82:0,39,302	1/1:5,9:15:9.62:254,10,0	1/1:14,11:26:53.89:501,54,0	1/1:2,8:10:18.04:183,18,0	0/0:20,0:20:41.74:0,42,320	0/0:17,0:18:34.88:0,35,259	0/0:13,0:14:16.90:0,17,116	0/0:21,0:22:50.73:0,51,392	0/0:22,0:23:43.83:0,44,331	0/0:19,0:20:8.52:0,9,185	0/0:17,0:17:32.81:0,33,255
chr10	10881053	.	CCAAA	C	5670.78	PASS	AB=0.909;AC=23;AF=0.411;AN=56;BaseQRankSum=13.976;DP=639;FS=0.405;HRun=0;HaplotypeScore=101.5701;InbreedingCoeff=0.9202;MQ=63.30;MQ0=0;MQRankSum=-1.857;QD=22.50;ReadPosRankSum=2.421;VQSLOD=4.7436;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:14,25:39:57.19:918,57,0	0/1:9,1:10:27.22:27,0,412	0/0:34,0:32:36.12:0,36,683	0/0:27,0:22:22.58:0,23,409	1/1:8,18:26:45.11:696,45,0	0/0:13,0:13:33.11:0,33,795	0/0:33,0:33:48.13:0,48,1041	1/1:20,6:26:21.06:318,21,0	0/0:20,0:20:51.17:0,51,1185	0/0:24,0:24:45.14:0,45,1034	0/0:15,0:15:36.12:0,36,835	1/1:6,12:18:33.11:531,33,0	1/1:4,14:18:36.12:580,36,0	1/1:7,11:18:30.10:483,30,0	0/0:26,0:26:63.20:0,63,1464	0/0:20,0:20:42.14:0,42,982	0/0:40,0:40:90.28:0,90,2113	0/0:30,0:30:69.24:0,69,1606	1/1:10,9:19:27.09:435,27,0	1/1:5,16:21:36.05:524,36,0	1/1:12,6:18:12.04:193,12,0	1/1:10,10:20:27.09:435,27,0	0/0:14,0:14:27.09:0,27,650	0/0:22,0:22:36.12:0,36,867	1/1:5,14:19:33.11:531,33,0	0/0:24,0:24:57.20:0,57,1355	0/0:33,0:33:75.26:0,75,1752	0/0:11,0:11:30.10:0,30,712
chr10	10881482	.	TA	T	7965.44	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=4.159;DP=585;FS=0.997;HRun=12;HaplotypeScore=69.0375;InbreedingCoeff=0.9807;MQ=60.20;MQ0=3;MQRankSum=2.599;QD=16.63;ReadPosRankSum=3.499;VQSLOD=5.9805;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:56.98:0,57,547	1/1:2,8:10:26.59:197,27,0	0/0:18,0:10:15.03:0,15,100	0/0:13,0:4:12:0,12,109	1/1:4,28:33:79.65:608,80,0	0/0:22,0:22:60.07:0,60,592	0/0:16,1:17:18.84:0,19,367	1/1:10,23:32:52.14:511,52,0	0/0:10,0:10:23.97:0,24,222	1/1:7,16:23:46.80:348,47,0	1/1:10,16:26:47.45:359,47,0	1/1:3,11:14:29.88:232,30,0	1/1:5,14:21:45.84:330,46,0	1/1:2,13:16:40.88:308,41,0	1/1:2,13:15:32.87:255,33,0	1/1:1,23:24:62.76:488,63,0	1/1:7,22:30:61.77:470,62,0	1/1:7,16:22:29.83:232,30,0	1/1:7,16:22:47.79:365,48,0	1/1:1,24:25:65.39:494,65,0	1/1:0,5:5:11.95:93,12,0	1/1:2,9:13:27.96:198,28,0	1/1:4,20:24:46.70:369,47,0	1/1:2,20:21:50.79:395,51,0	1/1:3,20:24:37.15:422,37,0	1/1:4,25:29:65.57:503,66,0	1/1:3,30:33:80.67:627,81,0	1/1:4,7:11:20.90:162,21,0
chr10	10885674	.	C	CAGAG	2348.72	PASS	AB=0.925;AC=42;AF=0.840;AN=50;BaseQRankSum=-2.908;DP=554;FS=0.000;HRun=0;HaplotypeScore=123.5792;InbreedingCoeff=0.2082;MQ=55.07;MQ0=16;MQRankSum=1.404;QD=5.41;ReadPosRankSum=-0.779;VQSLOD=2.0218;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:26:6.05:143,0,6	1/1:10,0:10:6.46:49,6,0	./.	./.	1/1:9,7:21:3.01:71,3,0	1/1:18,1:19:12.50:182,13,0	0/1:29,0:29:34.47:92,0,34	./.	1/1:18,8:29:6:93,6,0	1/1:9,0:9:3:28,3,0	1/1:16,0:16:8.90:70,9,0	0/1:12,7:21:40.42:64,0,40	1/1:11,7:20:3.01:70,3,0	1/1:8,9:19:6.02:141,6,0	1/1:21,0:21:20.98:177,21,0	1/1:23,0:23:15.02:193,15,0	1/1:19,0:18:17.91:187,18,0	1/1:16,0:16:12.01:170,12,0	0/0:4,0:10:8.95:0,9,73	0/1:14,0:23:0.74:1,0,44	0/0:14,0:17:2.74:0,3,12	1/1:18,0:18:9.01:118,9,0	1/1:12,0:12:2.99:24,3,0	1/1:19,0:18:17.85:156,18,0	1/1:18,0:18:14.25:169,14,0	1/1:19,0:19:10.51:63,11,0	1/1:23,0:23:17.95:166,18,0	1/1:2,0:2:3.01:52,3,0
chr10	10886186	.	ATGTGTGTGTGTGTGTGTGTGTG	A	2407.91	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=5.148;DP=458;FS=1.530;HRun=0;HaplotypeScore=225.0942;InbreedingCoeff=0.6649;MQ=64.35;MQ0=12;MQRankSum=-0.277;QD=27.68;ReadPosRankSum=-1.403;VQSLOD=2.4802;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:21:15:0,15,441	0/0:4,0:4:3.01:0,3,249	0/0:16,0:9:4.46:0,4,188	0/1:11,0:7:10.34:10,0,52	0/0:16,0:24:23.10:0,23,1172	0/0:4,0:12:18.05:0,18,285	0/0:7,0:13:18.05:0,18,409	1/1:13,15:28:30.21:442,30,0	0/0:5,0:13:18.03:0,18,252	0/0:18,0:18:42.13:0,42,2753	0/0:6,0:20:6.02:0,6,357	0/0:5,0:11:24.08:0,24,1898	0/0:9,0:17:30.08:0,30,2308	0/0:6,0:14:15.05:0,15,1287	0/0:10,0:11:15.05:0,15,1141	0/0:9,0:19:9.02:0,9,583	0/0:21,0:26:36.56:0,37,1263	0/0:17,0:22:38.48:0,38,1464	1/1:8,8:15:20.17:449,20,0	1/1:4,17:21:22.73:1501,23,0	1/1:3,8:9:3.01:158,3,0	0/0:9,0:9:12.03:0,12,619	0/0:11,0:22:12.08:0,12,1391	0/0:7,0:10:6.02:0,6,511	0/0:11,0:17:23.32:0,23,1753	0/0:27,0:27:60.17:0,60,4250	0/0:6,0:14:18.50:0,19,1150	0/0:6,0:6:9.03:0,9,558
chr10	10886436	.	GT	G	2474.46	PASS	AB=0.694;AC=21;AF=0.375;AN=56;BaseQRankSum=-2.524;DP=587;FS=2.319;HRun=13;HaplotypeScore=80.3837;InbreedingCoeff=0.4021;MQ=68.97;MQ0=10;MQRankSum=1.559;QD=9.16;ReadPosRankSum=4.974;VQSLOD=3.1728;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:39,3:44:11.89:0,12,740	0/1:1,7:8:8.26:110,0,8	0/1:35,1:16:41.43:41,0,111	0/0:33,2:20:14.49:0,14,115	0/0:9,0:31:35.25:0,35,302	0/0:11,2:13:2.11:0,2,176	0/1:13,1:13:6.74:7,0,166	0/0:19,1:32:11.68:0,12,147	0/0:9,1:10:5.13:0,5,211	1/1:8,6:15:10.69:144,11,0	0/1:5,9:13:52.70:146,0,53	0/0:5,0:20:31.53:0,32,169	0/0:11,0:22:23.88:0,24,154	0/0:4,0:11:8.67:0,9,53	1/1:2,8:10:23.85:175,24,0	1/1:4,10:14:7.80:175,8,0	1/1:7,26:35:81.58:581,82,0	0/1:8,16:26:32.74:263,0,33	0/0:5,1:15:9.82:0,10,136	0/0:14,0:31:48.19:0,48,343	0/0:11,0:22:33.98:0,34,223	0/0:4,0:11:16.72:0,17,85	1/1:7,11:18:25.82:180,26,0	1/1:5,16:21:44.74:328,45,0	0/0:7,1:17:9.87:0,10,152	0/1:10,11:24:24.56:229,0,25	1/1:8,13:24:12.78:214,13,0	0/1:3,5:8:9.32:73,0,9
chr10	10888744	.	T	TGAAG	30939.62	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-7.662;DP=653;FS=0.000;HRun=0;HaplotypeScore=99.5794;InbreedingCoeff=0.9776;MQ=50.06;MQ0=3;MQRankSum=-8.661;QD=52.00;ReadPosRankSum=3.798;VQSLOD=5.6579;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,22:23:45.15:1113,45,0	1/1:0,12:12:24.08:597,24,0	0/0:30,0:27:78.21:0,78,1254	0/0:28,0:23:65.50:0,66,1069	1/1:6,23:31:60.20:1334,60,0	1/1:3,19:21:54.18:1207,54,0	1/1:9,22:25:55.70:1380,56,0	1/1:12,21:28:69.21:1668,69,0	1/1:3,20:24:48.16:1195,48,0	1/1:6,25:32:81.26:2032,81,0	1/1:3,12:15:36.12:859,36,0	1/1:4,26:30:69.24:1765,69,0	1/1:3,14:21:33.11:876,33,0	1/1:4,23:28:60.21:1532,60,0	1/1:2,25:27:63.22:1625,63,0	1/1:5,22:25:54.18:1396,54,0	1/1:3,14:17:27.09:709,27,0	1/1:4,16:22:51.15:1264,51,0	1/1:1,6:7:21.07:523,21,0	1/1:5,17:23:45.15:1023,45,0	1/1:4,10:14:24.04:530,24,0	1/1:2,18:21:48.16:1180,48,0	1/1:5,14:21:51.17:1174,51,0	1/1:4,11:14:21.07:558,21,0	1/1:6,23:29:63.21:1429,63,0	1/1:6,24:30:78.27:1980,78,0	1/1:4,23:29:63.22:1671,63,0	1/1:0,6:6:12.04:320,12,0
chr10	10889935	.	C	CT	1377.62	PASS	AB=0.816;AC=27;AF=0.482;AN=56;BaseQRankSum=-2.715;DP=561;FS=1.666;HRun=16;HaplotypeScore=96.7828;InbreedingCoeff=0.2171;MQ=57.51;MQ0=8;MQRankSum=-1.814;QD=3.73;ReadPosRankSum=-1.468;VQSLOD=0.8017;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:16,3:21:6.36:6,0,125	0/1:6,7:13:15.56:78,0,16	1/1:15,0:6:2.97:20,3,0	0/0:11,0:8:2.37:0,2,11	0/0:14,0:23:6.77:0,7,69	0/1:20,5:26:28.52:29,0,146	0/1:13,1:15:2.48:2,0,50	0/0:17,0:28:26.32:0,26,88	0/1:17,0:19:23.75:24,0,56	1/1:18,6:24:3.17:123,3,0	1/1:9,7:16:17.82:127,18,0	0/0:6,0:12:7.99:0,8,23	0/0:4,0:14:14.69:0,15,50	0/0:9,0:13:9.82:0,10,28	1/1:9,13:23:10.96:164,11,0	0/1:6,11:20:12.89:111,0,13	1/1:14,10:25:3.35:139,3,0	1/1:9,13:22:1:90,1,0	0/1:14,0:22:5.95:6,0,46	0/0:9,0:27:27.47:0,27,79	0/0:5,0:9:11.06:0,11,40	0/0:14,0:26:26.38:0,26,97	1/1:7,9:18:6.39:114,6,0	1/1:14,6:20:5.73:65,6,0	0/0:10,0:26:27.15:0,27,86	0/1:15,8:24:17.14:140,0,17	1/1:8,13:21:29.67:219,30,0	0/1:8,6:14:12.61:94,0,13
chr10	10891449	.	AC	A	3031.62	PASS	AB=1.000;AC=23;AF=0.426;AN=54;BaseQRankSum=3.834;DP=320;FS=3.585;HRun=4;HaplotypeScore=54.2507;InbreedingCoeff=0.8428;MQ=63.72;MQ0=0;MQRankSum=-5.713;QD=25.26;ReadPosRankSum=2.336;VQSLOD=2.5376;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:66.17:0,66,855	1/1:0,4:4:9.03:108,9,0	0/0:4,0:4:8.99:0,9,101	0/1:4,0:4:21.31:21,0,34	0/0:3,0:3:9.03:0,9,126	0/0:18,0:18:45.13:0,45,611	0/0:41,0:41:99:0,111,1458	0/0:6,0:6:15.03:0,15,179	0/0:6,0:6:18.02:0,18,228	1/1:2,5:7:15.04:179,15,0	1/1:0,2:2:5.99:57,6,0	0/0:11,0:11:27.08:0,27,362	0/0:8,0:8:24.07:0,24,314	0/0:8,0:8:18.05:0,18,237	1/1:0,4:4:12.04:144,12,0	1/1:2,4:6:15.03:168,15,0	1/1:2,28:30:69.21:827,69,0	1/1:4,17:21:51.15:611,51,0	0/0:16,0:16:48.15:0,48,644	0/0:4,0:4:9.03:0,9,126	0/0:44,0:44:99:0,123,1676	0/0:2,0:2:6.02:0,6,83	1/1:2,5:7:15.01:165,15,0	1/1:4,9:13:24.07:286,24,0	0/0:6,0:6:18.06:0,18,252	1/1:2,10:12:33.09:386,33,0	1/1:1,9:10:25.89:292,26,0	./.
chr10	10891485	.	G	GC	5995.07	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-7.257;DP=357;FS=4.633;HRun=5;HaplotypeScore=61.8134;InbreedingCoeff=0.9398;MQ=73.67;MQ0=0;MQRankSum=-4.560;QD=30.43;ReadPosRankSum=-0.523;VQSLOD=5.2469;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:57.09:0,57,602	1/1:1,4:5:15.05:196,15,0	0/0:7,0:7:18.04:0,18,193	0/0:9,0:9:14.22:0,14,174	1/1:3,5:8:14.69:175,15,0	0/0:12,0:12:30.07:0,30,321	0/0:31,0:31:81.18:0,81,869	0/0:16,0:16:36.09:0,36,387	0/0:6,0:6:15.03:0,15,161	1/1:2,9:11:24.07:304,24,0	1/1:1,3:4:9.03:118,9,0	1/1:1,12:13:33.11:434,33,0	1/1:1,9:10:17.48:236,17,0	1/1:0,6:6:18.06:237,18,0	1/1:0,7:7:18.06:237,18,0	1/1:0,11:11:33.11:434,33,0	1/1:7,19:26:63.17:798,63,0	1/1:0,26:26:66.16:826,66,0	0/0:6,0:6:15.04:0,15,160	0/0:3,0:3:9:0,9,88	0/0:46,0:46:99:0,117,1248	1/1:1,3:4:9.02:104,9,0	1/1:3,10:13:24.08:315,24,0	1/1:1,12:13:27.08:338,27,0	1/1:0,9:9:21.07:276,21,0	1/1:3,11:14:29.08:376,29,0	1/1:0,15:15:39.13:513,39,0	1/1:0,2:2:6.02:79,6,0
chr10	10894157	.	CGGG	C	2299.86	PASS	AC=18;AF=0.360;AN=50;BaseQRankSum=-5.501;DP=225;FS=0.000;HRun=10;HaplotypeScore=51.6077;InbreedingCoeff=0.5836;MQ=82.83;MQ0=0;MQRankSum=0.639;QD=20.53;ReadPosRankSum=5.519;VQSLOD=0.5560;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:7:11.81:0,12,130	./.	0/0:15,0:11:11.93:0,12,191	0/0:16,0:14:3.17:0,3,207	1/1:5,12:17:42.13:563,42,0	0/0:8,0:8:2.94:0,3,18	0/0:3,0:4:8.93:0,9,82	0/0:3,0:3:0:0,0,0	0/0:4,0:4:5.95:0,6,67	./.	1/1:6,0:6:1.69:3,2,0	1/1:3,19:23:22.69:525,23,0	1/1:2,9:11:21.07:285,21,0	1/1:2,15:17:36.05:463,36,0	0/0:2,0:2:2.60:0,3,26	0/0:11,0:11:0.46:0,0,13	0/0:7,0:7:7.93:0,8,70	0/0:3,0:3:1.77:0,2,4	0/0:4,0:3:4.53:0,5,25	0/0:3,0:3:5.97:0,6,46	./.	1/1:3,10:13:21.07:284,21,0	0/0:7,0:7:5.96:0,6,45	0/0:4,0:4:1.92:0,2,18	1/1:1,13:14:24.08:326,24,0	1/1:7,0:7:0.93:2,1,0	1/1:4,0:4:1.74:5,2,0	0/0:3,0:3:3.45:0,3,22
chr10	10894170	.	GTGGTGTT	G	1155.09	PASS	AB=0.776;AC=25;AF=0.446;AN=56;BaseQRankSum=4.375;DP=231;FS=20.157;HRun=0;HaplotypeScore=70.2243;InbreedingCoeff=0.5117;MQ=85.50;MQ0=0;MQRankSum=-6.287;QD=19.92;ReadPosRankSum=-0.303;VQSLOD=1.2242;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:7:18.06:0,18,579	1/1:1,0:1:3.01:42,3,0	0/0:17,0:11:30.10:0,30,982	0/0:18,0:18:41.63:0,42,1194	0/0:21,0:22:61.76:0,62,1533	0/1:6,0:6:15.28:15,0,104	0/0:7,0:7:18.06:0,18,538	0/0:14,0:14:39.13:0,39,872	0/0:4,0:4:7.27:0,7,223	1/1:2,0:2:3:26,3,0	1/1:4,2:6:6.49:162,6,0	0/0:20,0:20:28.07:0,28,1064	0/0:9,0:9:21.07:0,21,405	0/0:18,0:18:42.14:0,42,907	1/1:0,1:1:3.01:66,3,0	1/1:3,3:6:3.20:227,3,0	1/1:4,2:7:2.08:196,2,0	1/1:1,1:2:3.01:66,3,0	0/0:3,0:2:5.97:0,6,102	1/1:1,0:1:3:26,3,0	0/0:8,0:8:3.01:0,3,71	0/0:11,0:11:27.09:0,27,634	0/1:3,1:4:14.06:45,0,14	1/1:4,1:5:5.97:85,6,0	0/0:14,0:14:30.10:0,30,718	0/1:1,1:9:45.92:80,0,46	1/1:2,3:5:11.97:190,12,0	1/1:2,1:3:8.97:111,9,0
chr10	10894173	.	GTGT	G	960.41	PASS	AB=0.992;AC=31;AF=0.574;AN=54;BaseQRankSum=5.688;DP=237;FS=49.634;HRun=0;HaplotypeScore=57.7015;InbreedingCoeff=0.4198;MQ=91.23;MQ0=0;MQRankSum=-6.515;QD=7.22;ReadPosRankSum=4.818;VQSLOD=0.6647;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:24.01:0,24,341	1/1:1,0:1:3.01:39,3,0	0/0:20,0:14:38.72:0,39,538	0/0:20,0:19:47.78:0,48,590	0/1:22,0:23:25.16:25,0,360	0/0:3,0:3:3.01:0,3,48	0/0:10,0:10:27.01:0,27,316	0/0:17,0:17:23.65:0,24,194	0/0:4,0:4:8.96:0,9,116	1/1:1,0:1:3.01:35,3,0	1/1:3,2:5:6.01:66,6,0	0/1:19,0:19:2.63:3,0,70	1/1:9,0:9:11.66:43,12,0	0/1:19,0:19:19.66:20,0,84	1/1:3,0:3:9.01:86,9,0	1/1:6,0:6:18.01:198,18,0	1/1:6,0:6:14.95:152,15,0	1/1:2,0:2:3:26,3,0	0/1:3,0:2:9.71:10,0,15	./.	0/0:7,0:7:3:0,3,27	0/1:11,0:11:12.68:13,0,85	1/1:1,2:3:3:37,3,0	1/1:5,0:5:5.98:55,6,0	0/0:14,0:14:2.65:0,3,114	1/1:8,0:8:11.77:91,12,0	1/1:6,0:6:14.95:142,15,0	1/1:3,0:3:9:100,9,0
chr10	10894772	.	TG	T	3216.43	PASS	AC=20;AF=0.417;AN=48;BaseQRankSum=-7.241;DP=298;FS=24.507;HRun=9;HaplotypeScore=57.0746;InbreedingCoeff=0.7763;MQ=70.93;MQ0=15;MQRankSum=3.760;QD=17.97;ReadPosRankSum=9.533;VQSLOD=1.7122;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,24:31:63.03:576,63,0	./.	0/0:21,0:13:12.43:0,12,171	0/0:25,1:11:19.71:0,20,158	1/1:1,18:19:51.03:465,51,0	1/1:1,14:15:29.97:265,30,0	1/1:4,16:19:38.93:340,39,0	./.	1/1:2,12:14:27.01:246,27,0	0/0:3,0:3:5.97:0,6,51	0/0:1,0:1:3:0,3,26	1/1:2,24:26:54.49:494,54,0	1/1:0,7:7:12.01:110,12,0	1/1:1,19:20:16.33:404,16,0	0/0:3,0:3:2.97:0,3,20	0/0:5,0:4:5.94:0,6,41	0/0:14,0:14:33.05:0,33,222	0/0:8,0:8:14.88:0,15,107	0/0:7,0:7:11.05:0,11,74	./.	0/0:11,0:11:1.01:0,1,2	1/1:3,10:13:24.01:219,24,0	0/0:2,0:2:2.98:0,3,21	0/0:1,0:1:2.97:0,3,20	1/1:2,12:14:31.57:278,32,0	./.	0/0:13,0:13:17.10:0,17,103	0/0:1,0:1:2.96:0,3,19
chr10	10895035	.	ATT	A	3198.70	PASS	AB=0.690;AC=43;AF=0.768;AN=56;BaseQRankSum=4.649;DP=433;FS=16.082;HRun=15;HaplotypeScore=99.8058;InbreedingCoeff=0.3972;MQ=69.31;MQ0=1;MQRankSum=-3.601;QD=9.01;ReadPosRankSum=1.725;VQSLOD=0.6163;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:10,2:44:18.76:0,19,202	1/1:1,0:1:2.99:24,3,0	0/0:12,0:13:18.03:0,18,195	0/1:16,0:14:0.12:0,0,135	1/1:5,9:16:20.52:214,21,0	0/0:2,1:14:1.52:0,2,60	0/1:8,1:20:19.72:20,0,61	1/1:15,1:28:15.42:109,15,0	0/1:2,1:17:13.23:13,0,76	1/1:2,4:7:14.58:115,15,0	1/1:3,0:3:2.96:25,3,0	1/1:3,0:23:54.73:235,55,0	1/1:6,0:17:26.98:117,27,0	1/1:5,1:24:46.21:211,46,0	1/1:6,17:24:50.64:430,51,0	1/1:6,7:14:20.26:166,20,0	1/1:4,15:21:47.42:393,47,0	1/1:2,7:9:18.83:160,19,0	0/1:10,0:20:11.79:31,0,12	0/0:3,0:6:2.62:0,3,25	0/1:6,1:15:10.63:40,0,11	1/1:3,0:15:29.89:129,30,0	1/1:1,1:2:2.98:26,3,0	1/1:5,13:18:26.91:237,27,0	1/1:2,12:14:23.94:211,24,0	1/1:4,8:12:20.92:181,21,0	1/1:4,5:9:14.91:132,15,0	1/1:1,7:8:17.73:144,18,0
chr10	10895493	.	AGAAGACGGT	A	19581.97	PASS	AB=0.563;AC=31;AF=0.554;AN=56;BaseQRankSum=17.363;DP=626;FS=7.397;HRun=0;HaplotypeScore=197.6857;InbreedingCoeff=0.8942;MQ=77.40;MQ0=0;MQRankSum=-17.982;QD=61.97;ReadPosRankSum=1.595;VQSLOD=4.1642;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:99:0,99,4549	0/1:2,7:9:99:624,0,187	0/0:21,0:21:60.20:0,60,2479	0/0:25,0:25:63.32:0,63,2874	0/0:26,0:26:78.27:0,78,3621	0/0:16,0:16:48.16:0,48,2263	0/0:24,0:24:69.24:0,69,3300	1/1:7,31:38:93.28:2663,93,0	0/0:27,0:27:75.24:0,75,3427	1/1:2,22:24:66.23:2047,66,0	1/1:2,14:16:12.04:372,12,0	0/0:22,0:22:66.23:0,66,3178	0/0:29,0:29:87.30:0,87,4222	0/0:31,0:31:90.30:0,90,4134	1/1:2,30:32:78.27:2418,78,0	1/1:1,23:24:63.22:1954,63,0	1/1:2,10:12:21.07:651,21,0	1/1:2,8:10:21.07:651,21,0	1/1:5,19:24:57.19:1744,57,0	1/1:1,16:17:9.03:214,9,0	1/1:6,11:17:12.04:371,12,0	0/0:25,0:25:72.25:0,72,3502	1/1:0,14:14:27.09:837,27,0	1/1:3,5:8:5.61:150,6,0	0/0:31,0:31:93.32:0,93,4469	1/1:3,24:27:72.25:2188,72,0	1/1:5,27:32:66.23:2046,66,0	1/1:0,12:12:21.07:651,21,0
chr10	10896021	.	T	TAA	15251.93	PASS	AB=1.000;AC=53;AF=0.946;AN=56;BaseQRankSum=-4.510;DP=713;FS=15.535;HRun=9;HaplotypeScore=115.2010;InbreedingCoeff=0.6312;MQ=74.97;MQ0=1;MQRankSum=-6.403;QD=21.98;ReadPosRankSum=3.272;VQSLOD=2.5893;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,0:37:67.37:231,67,0	1/1:0,7:8:23.57:332,24,0	0/1:19,0:16:7.58:8,0,166	0/0:19,0:17:35.78:0,36,326	1/1:3,0:37:75.68:279,76,0	1/1:2,0:28:52.40:180,52,0	1/1:3,0:20:34.93:120,35,0	1/1:10,23:35:72.18:1037,72,0	1/1:4,0:20:3.13:78,3,0	1/1:10,25:35:72.22:1064,72,0	1/1:1,18:19:50.66:739,51,0	1/1:2,0:29:57.14:196,57,0	1/1:5,0:31:52.65:183,53,0	1/1:7,0:29:19.38:136,19,0	1/1:7,25:32:74.02:1087,74,0	1/1:4,24:30:39.76:950,40,0	1/1:2,34:37:87.30:1339,87,0	1/1:1,14:15:33.11:507,33,0	1/1:5,19:25:31.38:845,31,0	1/1:4,18:22:51.10:725,51,0	1/1:2,23:26:59.57:837,60,0	1/1:1,0:10:22.46:77,22,0	1/1:4,18:22:46.40:696,46,0	1/1:2,23:26:54.18:831,54,0	1/1:5,0:22:34.93:120,35,0	1/1:7,28:34:84.24:1242,84,0	1/1:4,31:35:78.26:1201,78,0	1/1:2,4:9:19.53:210,20,0
chr10	10898210	.	CAGAG	C	18558.67	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=16.352;DP=832;FS=0.267;HRun=0;HaplotypeScore=156.7340;InbreedingCoeff=0.9972;MQ=85.77;MQ0=0;MQRankSum=-6.336;QD=43.77;ReadPosRankSum=4.825;VQSLOD=4.9493;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,163,4269	1/1:1,8:9:21.07:398,21,0	0/0:35,0:35:90.30:0,90,2118	0/0:32,0:31:81.15:0,81,1864	0/0:34,0:34:96.33:0,96,2477	0/0:23,0:23:69.24:0,69,1830	0/0:27,0:27:78.27:0,78,2060	1/1:2,17:19:51.16:920,51,0	0/0:32,0:32:90.31:0,90,2328	1/1:1,24:25:72.23:1326,72,0	1/1:0,22:22:36.12:683,36,0	0/0:43,0:43:99:0,123,3245	0/0:30,0:30:87.30:0,87,2295	0/0:38,0:38:99:0,105,2698	1/1:1,38:39:96.33:1823,96,0	1/1:3,44:47:36.50:2079,37,0	1/1:1,36:37:87.30:1652,87,0	1/1:1,19:20:51.17:968,51,0	1/1:5,21:26:63.14:1048,63,0	1/1:2,29:31:69.24:1308,69,0	1/1:1,38:39:87.30:1652,87,0	0/0:32,0:32:93.32:0,93,2414	1/1:1,18:19:33.11:626,33,0	1/1:2,26:28:57.20:1082,57,0	0/0:27,0:27:75.26:0,75,1994	1/1:2,34:36:99:1803,102,0	1/1:1,20:21:48.16:905,48,0	1/1:0,6:6:15.05:285,15,0
chr10	10900440	.	C	CCT	929.71	PASS	AB=0.951;AC=28;AF=0.538;AN=52;BaseQRankSum=3.877;DP=238;FS=10.653;HRun=0;HaplotypeScore=73.8538;InbreedingCoeff=0.2029;MQ=53.14;MQ0=24;MQRankSum=-1.401;QD=6.24;ReadPosRankSum=1.579;VQSLOD=2.1382;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:4.63:0,5,80	1/1:1,1:1:2.98:21,3,0	0/1:14,0:4:3.27:3,0,21	0/0:24,0:8:5.05:0,5,32	./.	0/0:13,0:13:10.40:0,10,167	0/0:4,0:4:0.29:0,0,1	0/1:14,0:9:58.83:59,0,157	1/1:1,0:1:0.47:1,0,0	1/1:5,4:6:14.96:256,15,0	1/1:3,0:2:2.74:12,3,0	0/1:3,0:2:0.06:0,0,0	0/1:2,0:2:0:0,0,0	0/0:3,0:3:2.48:0,2,11	1/1:7,0:7:4.66:21,5,0	0/1:13,3:16:7.56:251,0,8	./.	0/0:6,0:5:9.02:0,9,100	0/0:8,0:7:2.79:0,3,120	0/1:12,0:11:17.70:18,0,22	1/1:9,0:9:3.45:23,3,0	1/1:6,0:6:0.47:1,0,0	1/1:10,0:9:17.30:108,17,0	1/1:10,0:10:3.89:31,4,0	0/0:7,0:6:11.19:0,11,95	0/1:11,0:10:66.26:71,0,66	1/1:4,0:5:8.17:54,8,0	0/1:7,3:5:23.32:141,0,23
chr10	10901175	.	G	GCC	2378.56	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-5.756;DP=568;FS=0.516;HRun=3;HaplotypeScore=96.3057;InbreedingCoeff=0.9467;MQ=63.03;MQ0=22;MQRankSum=4.455;QD=31.71;ReadPosRankSum=-1.967;VQSLOD=2.7629;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:9:17.72:0,18,193	0/0:7,0:7:18.05:0,18,223	0/0:47,0:17:23.51:0,24,362	0/0:54,0:18:3.50:0,4,161	0/0:29,0:29:53.93:0,54,634	0/0:8,0:8:24.02:0,24,283	0/0:13,0:12:19.09:0,19,191	1/1:12,14:26:66.06:860,66,0	0/0:15,0:15:23.63:0,24,259	0/0:28,0:26:60.20:0,60,811	0/0:22,0:22:60.60:0,61,757	0/0:14,0:14:27.40:0,27,251	0/0:19,0:18:42.04:0,42,484	0/0:15,0:15:35.80:0,36,458	0/0:20,0:21:51.15:0,51,654	0/0:15,0:14:30.10:0,30,396	0/0:17,0:17:39.09:0,39,469	0/0:24,0:24:44.84:0,45,536	1/1:15,0:13:39.12:610,39,0	1/1:4,16:19:54.09:634,54,0	1/1:13,0:13:30.06:434,30,0	0/0:20,0:21:39.04:0,39,456	0/0:21,0:21:54.17:0,54,700	0/0:12,0:12:24.08:0,24,318	0/0:19,0:18:26.73:0,27,296	0/0:18,0:18:51.16:0,51,680	0/0:33,0:32:96.28:0,96,1233	0/0:9,0:9:24.08:0,24,321
chr10	10901565	.	ATAGT	A	4334.02	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=10.799;DP=630;FS=0.951;HRun=0;HaplotypeScore=102.9623;InbreedingCoeff=0.9985;MQ=80.76;MQ0=0;MQRankSum=-4.125;QD=51.60;ReadPosRankSum=2.595;VQSLOD=6.0470;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,18:19:48.16:928,48,0	0/0:9,0:9:27.09:0,27,755	0/0:17,0:17:51.18:0,51,1365	0/0:17,0:17:47.95:0,48,1178	0/0:39,0:39:99:0,117,3260	1/1:1,29:30:78.27:1557,78,0	1/1:1,14:15:42.14:834,42,0	0/0:38,0:37:99:0,114,2850	1/1:1,19:20:51.18:1016,51,0	0/0:28,0:28:84.29:0,84,2274	0/0:22,0:22:63.22:0,63,1762	0/0:13,0:13:39.13:0,39,1017	0/0:31,0:31:87.30:0,87,2376	0/0:25,0:25:75.26:0,75,2083	0/0:32,0:32:96.33:0,96,2641	0/0:30,0:30:90.31:0,90,2454	0/0:14,0:14:42.14:0,42,1175	0/0:27,0:27:75.26:0,75,2078	0/0:14,0:14:33.11:0,33,907	0/0:31,0:30:87.30:0,87,2432	0/0:14,0:14:42.14:0,42,1140	0/0:20,0:20:57.18:0,57,1503	0/0:21,0:21:63.22:0,63,1747	0/0:7,0:7:21.07:0,21,588	0/0:27,0:27:72.25:0,72,1968	0/0:27,0:27:81.28:0,81,2263	0/0:24,0:24:72.25:0,72,1979	0/0:19,0:19:57.20:0,57,1591
chr10	10903861	.	G	GGT	4447.36	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=13.714;DP=615;FS=0.954;HRun=0;HaplotypeScore=85.8463;InbreedingCoeff=0.9982;MQ=84.96;MQ0=0;MQRankSum=-5.965;QD=51.71;ReadPosRankSum=1.455;VQSLOD=5.3483;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,31:31:87.30:1644,87,0	0/0:14,0:14:42.14:0,42,685	0/0:25,0:25:66.20:0,66,1028	0/0:16,0:16:42.02:0,42,656	0/0:23,0:23:69.22:0,69,1101	1/1:0,15:16:42.14:785,42,0	1/1:0,14:15:42.14:808,42,0	0/0:35,0:35:99:0,105,1691	1/1:1,23:24:20.29:1211,20,0	0/0:20,0:20:57.19:0,57,930	0/0:14,0:14:42.14:0,42,685	0/0:30,0:30:90.31:0,90,1468	0/0:19,0:19:54.17:0,54,853	0/0:26,0:26:72.23:0,72,1150	0/0:23,0:23:69.24:0,69,1121	0/0:26,0:26:75.24:0,75,1199	0/0:18,0:18:54.18:0,54,881	0/0:28,0:28:81.28:0,81,1322	0/0:17,0:17:51.16:0,51,809	0/0:16,0:16:45.15:0,45,734	0/0:11,0:11:30.10:0,30,489	0/0:31,0:31:90.31:0,90,1462	0/0:23,0:23:63.22:0,63,1028	0/0:33,0:33:96.24:0,96,1485	0/0:28,0:28:78.27:0,78,1273	0/0:21,0:21:60.20:0,60,957	0/0:23,0:23:69.24:0,69,1125	0/0:9,0:9:27.09:0,27,441
chr10	10904618	.	A	ATT	9906.84	PASS	AB=0.575;AC=31;AF=0.554;AN=56;BaseQRankSum=-13.918;DP=607;FS=0.000;HRun=9;HaplotypeScore=89.2771;InbreedingCoeff=0.9179;MQ=66.16;MQ0=4;MQRankSum=0.567;QD=32.59;ReadPosRankSum=4.316;VQSLOD=4.9933;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:78.14:0,78,820	1/1:1,9:10:21.07:323,21,0	0/0:23,0:18:38.89:0,39,387	0/0:16,0:14:8.91:0,9,181	0/0:32,0:33:78.12:0,78,885	0/0:17,0:17:45.10:0,45,471	0/0:13,0:13:36.09:0,36,383	0/0:43,0:42:70.98:0,71,948	0/0:16,0:16:48.12:0,48,511	1/1:5,24:29:64.75:952,65,0	1/1:1,19:22:59.13:797,59,0	1/1:2,15:18:44.64:654,45,0	1/1:0,8:7:18.06:277,18,0	1/1:4,12:16:48.06:707,48,0	1/1:3,22:25:54.18:831,54,0	1/1:3,20:25:56.68:829,57,0	1/1:4,19:24:41.63:597,42,0	1/1:4,20:24:47.65:701,48,0	0/0:32,0:32:62.96:0,63,665	0/0:48,0:48:99:0,132,1396	0/0:9,0:9:20.95:0,21,223	1/1:0,5:5:15.05:225,15,0	1/1:2,21:23:54.18:809,54,0	1/1:1,8:9:24.08:369,24,0	0/0:22,0:22:57.11:0,57,607	1/1:5,24:28:69.02:1018,69,0	0/1:6,15:22:12.86:452,0,13	1/1:4,7:11:24.08:365,24,0
chr10	10906606	.	GTATT	G	1203.80	PASS	AC=32;AF=0.842;AN=38;BaseQRankSum=4.888;DP=300;FS=1.227;HRun=0;HaplotypeScore=52.3270;InbreedingCoeff=0.4364;MQ=68.51;MQ0=0;MQRankSum=-1.725;QD=7.21;ReadPosRankSum=0.243;VQSLOD=1.9095;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:18.06:0,18,374	./.	./.	./.	1/1:6,1:7:3.01:46,3,0	0/0:19,0:19:21.06:0,21,442	./.	0/0:49,0:49:0:0,0,0	./.	1/1:13,0:15:6.01:56,6,0	1/1:10,0:12:3:28,3,0	1/1:8,0:11:5.97:48,6,0	1/1:6,0:7:3:28,3,0	1/1:3,0:4:3:28,3,0	1/1:5,0:8:6.01:56,6,0	1/1:5,0:7:6.01:56,6,0	1/1:15,9:24:15.05:228,15,0	./.	1/1:7,4:11:12.01:140,12,0	1/1:9,3:12:9.03:137,9,0	1/1:3,2:5:6.02:91,6,0	./.	1/1:5,0:6:3:28,3,0	./.	1/1:9,4:13:12.04:182,12,0	./.	1/1:11,0:12:3:28,3,0	1/1:6,0:13:15.02:140,15,0
chr10	10907489	.	A	AT	8953.07	PASS	AB=0.575;AC=36;AF=0.643;AN=56;BaseQRankSum=-12.891;DP=622;FS=1.526;HRun=11;HaplotypeScore=65.7064;InbreedingCoeff=0.6856;MQ=71.73;MQ0=0;MQRankSum=1.119;QD=20.07;ReadPosRankSum=0.634;VQSLOD=5.8638;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,25:30:22.66:593,23,0	1/1:2,7:9:21.04:213,21,0	0/0:18,0:14:20.14:0,20,156	0/0:14,0:13:23.57:0,24,170	0/0:29,0:29:77.68:0,78,600	1/1:5,25:31:34.52:699,35,0	0/1:4,14:18:4.39:323,0,4	0/1:7,12:20:1.60:318,0,2	1/1:7,10:17:3.71:220,4,0	1/1:1,18:21:53.88:508,54,0	1/1:5,20:26:10.35:431,10,0	0/0:16,0:16:41.76:0,42,316	0/0:29,0:30:69.73:0,70,523	0/0:24,0:24:59.71:0,60,462	1/1:7,22:30:8.28:615,8,0	1/1:2,21:23:54.11:547,54,0	1/1:3,29:32:48.91:677,49,0	1/1:2,11:13:3.82:220,4,0	1/1:8,16:24:30.85:486,31,0	1/1:4,20:25:16.61:519,17,0	1/1:2,20:22:57.11:579,57,0	0/0:20,0:22:58.77:0,59,440	1/1:5,16:22:41.92:411,42,0	0/1:8,16:24:38.84:373,0,39	0/0:23,0:23:59.76:0,60,464	1/1:5,19:25:9.75:475,10,0	1/1:5,21:26:42.89:613,43,0	0/1:1,7:8:5.20:134,0,5
chr10	10908308	.	T	TG	9294.75	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=0.782;DP=664;FS=4.792;HRun=8;HaplotypeScore=125.6948;InbreedingCoeff=0.9394;MQ=80.74;MQ0=0;MQRankSum=-2.574;QD=20.38;ReadPosRankSum=3.135;VQSLOD=3.6866;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,1:25:37.10:208,37,0	1/1:0,11:11:30.09:346,30,0	0/0:28,0:27:38.34:0,38,307	0/0:22,0:22:35.95:0,36,291	0/0:32,0:33:83.04:0,83,743	1/1:6,1:23:40.02:213,40,0	1/1:5,1:24:48.33:246,48,0	1/1:16,2:20:23.49:146,23,0	1/1:2,2:18:36.03:198,36,0	1/1:4,13:17:39.12:450,39,0	1/1:3,12:15:33.10:381,33,0	0/0:29,0:29:75.01:0,75,681	0/0:30,0:30:77.98:0,78,699	0/0:20,0:20:60.03:0,60,549	1/1:2,34:36:96.29:1108,96,0	1/1:5,37:42:77.84:1150,78,0	1/1:4,37:41:99:1177,102,0	1/1:3,32:35:87.26:1004,87,0	1/1:6,0:10:14.43:90,14,0	1/1:9,1:13:2.26:32,2,0	1/1:22,2:35:6.49:44,6,0	0/0:20,0:21:53.06:0,53,473	1/1:4,11:15:33.10:381,33,0	1/1:2,32:35:93.11:1053,93,0	0/0:24,0:24:60.03:0,60,549	1/1:3,10:13:33.08:369,33,0	1/1:5,19:24:29.70:596,30,0	1/1:0,3:3:9.03:104,9,0
chr10	10909438	.	T	TTCG	4545.43	PASS	AB=0.951;AC=34;AF=0.607;AN=56;BaseQRankSum=-1.705;DP=487;FS=34.156;HRun=0;HaplotypeScore=156.2758;InbreedingCoeff=0.3986;MQ=60.45;MQ0=7;MQRankSum=-5.279;QD=12.84;ReadPosRankSum=2.926;VQSLOD=2.6850;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:18,2:19:25.01:204,25,0	1/1:3,4:7:13.20:229,13,0	0/0:27,0:15:33.65:0,34,469	0/0:27,0:15:31.96:0,32,469	0/0:28,0:28:11.37:0,11,218	1/1:15,0:15:14.07:183,14,0	1/1:17,0:16:14.45:155,14,0	0/1:26,0:27:20.98:107,0,21	0/1:11,0:11:3.89:112,0,4	1/1:16,6:22:8.90:492,9,0	0/1:13,2:15:4.08:143,0,4	0/1:13,0:13:18.86:19,0,72	0/0:14,0:14:7.86:0,8,81	0/0:5,0:5:6.15:0,6,19	1/1:14,0:13:0.96:274,1,0	1/1:12,5:17:36.30:516,36,0	1/1:21,3:24:32.81:439,33,0	1/1:11,2:13:18.27:212,18,0	0/1:34,0:31:47.03:47,0,273	0/1:24,0:24:6.39:6,0,41	0/1:7,0:5:1.65:15,0,2	0/0:17,0:17:4.12:0,4,205	0/1:9,3:12:2.30:251,0,2	1/1:12,3:14:25.16:245,25,0	0/0:15,0:15:39.91:0,40,181	1/1:9,3:12:14.95:274,15,0	1/1:11,15:27:27.81:396,28,0	1/1:2,5:7:14.07:228,14,0
chr10	10909439	.	T	TCG	2543.28	PASS	AB=0.968;AC=28;AF=0.500;AN=56;BaseQRankSum=-0.950;DP=486;FS=40.113;HRun=0;HaplotypeScore=152.1926;InbreedingCoeff=0.0416;MQ=60.24;MQ0=8;MQRankSum=-5.269;QD=7.33;ReadPosRankSum=3.932;VQSLOD=1.5778;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,9:19:15.21:275,15,0	0/1:7,0:7:2.60:60,0,3	0/0:27,0:15:35.11:0,35,468	0/0:28,0:15:26.51:0,27,434	0/0:28,0:28:16.53:0,17,218	1/1:10,6:16:9.94:284,10,0	1/1:11,5:15:11.89:238,12,0	0/1:29,0:29:53.76:103,0,54	1/1:8,4:12:4.68:221,5,0	0/1:19,2:21:4.50:214,0,5	0/1:14,1:15:25.16:132,0,25	0/1:13,0:13:20.25:20,0,57	0/0:14,0:14:6.09:0,6,55	0/0:5,0:5:6.28:0,6,29	0/1:14,0:13:21.69:90,0,22	1/1:17,0:17:26.28:201,26,0	0/1:24,0:24:11.43:123,0,11	1/1:13,0:13:6.04:64,6,0	0/1:32,2:31:99:116,0,290	0/1:24,0:24:46.65:47,0,75	0/0:6,0:4:3.78:0,4,11	0/0:16,0:16:0.35:0,0,178	0/1:13,0:12:22.33:53,0,22	1/1:14,1:14:5.27:124,5,0	0/0:15,0:15:35.55:0,36,135	0/1:11,1:12:8.61:106,0,9	0/1:22,3:25:6.64:177,0,7	1/1:7,0:7:2.34:69,2,0
chr10	10909441	.	GT	G	1411.66	PASS	AB=1.000;AC=14;AF=0.250;AN=56;BaseQRankSum=-1.780;DP=519;FS=36.544;HRun=10;HaplotypeScore=153.5259;InbreedingCoeff=0.6225;MQ=56.08;MQ0=8;MQRankSum=0.139;QD=10.78;ReadPosRankSum=1.254;VQSLOD=0.1432;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:27:23.57:0,24,87	0/0:7,0:7:13.72:0,14,62	0/1:25,0:13:2.80:3,0,179	0/0:29,0:14:12.90:0,13,116	1/1:3,24:27:54.25:521,54,0	0/0:19,0:22:10.85:0,11,74	0/0:21,0:20:0.06:0,0,32	0/0:30,0:37:37.70:0,38,162	0/1:14,0:13:5.54:6,0,43	0/0:22,0:22:29.85:0,30,154	0/0:15,0:15:7.84:0,8,52	1/1:3,8:11:11.90:201,12,0	1/1:10,5:15:17.95:152,18,0	1/1:4,3:7:5.71:38,6,0	0/0:14,0:13:6.10:0,6,59	0/0:17,0:17:19.94:0,20,110	0/0:24,0:24:1.95:0,2,49	0/0:12,0:12:8.82:0,9,68	0/0:29,0:34:50.31:0,50,295	0/0:19,0:27:37.76:0,38,200	0/0:5,0:4:2.97:0,3,20	1/1:6,11:17:32.47:274,32,0	0/0:13,0:12:2.98:0,3,34	0/0:13,0:12:9.70:0,10,43	1/1:0,15:15:44.99:389,45,0	0/0:12,0:12:9.97:0,10,54	0/0:24,0:24:12.59:0,13,86	0/0:7,0:7:9.10:0,9,54
chr10	10909448	.	TTTTG	T	1025.04	PASS	AB=0.984;AC=17;AF=0.304;AN=56;BaseQRankSum=-1.168;DP=556;FS=0.000;HRun=0;HaplotypeScore=181.8032;InbreedingCoeff=-0.2412;MQ=48.07;MQ0=15;MQRankSum=-2.808;QD=3.31;ReadPosRankSum=-1.028;VQSLOD=2.0927;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:28:87.47:87,0,275	0/0:6,0:5:2.57:0,3,44	0/0:26,0:11:10.76:0,11,373	0/0:33,0:14:22.39:0,22,247	0/0:31,0:31:68.89:0,69,661	0/1:18,1:19:72.67:73,0,136	0/1:19,0:18:99:110,0,138	0/1:40,0:40:63.38:63,0,339	0/1:16,0:13:46.94:91,0,47	0/1:23,0:23:13.85:14,0,108	1/1:17,1:18:13.58:125,14,0	0/0:14,0:14:38.23:0,38,376	0/0:17,0:15:25.46:0,25,229	0/0:9,0:8:11:0,11,77	0/1:18,0:17:5.64:94,0,6	0/1:17,0:17:26.70:64,0,27	0/1:19,1:20:32.92:128,0,33	0/1:12,1:12:56.83:89,0,57	0/0:43,0:39:3.16:0,3,550	0/0:25,0:24:11.01:0,11,417	0/0:5,0:3:3:0,3,34	0/0:17,0:17:32:0,32,381	0/1:16,0:15:10.44:61,0,10	0/1:12,1:12:2.24:104,0,2	0/0:19,0:19:53.90:0,54,564	0/1:18,0:17:17.16:17,0,83	0/1:23,0:23:39.03:53,0,39	0/1:7,0:6:10.52:11,0,29
chr10	10909449	.	TTTG	T	2326.09	PASS	AB=0.970;AC=27;AF=0.482;AN=56;BaseQRankSum=-3.147;DP=552;FS=0.000;HRun=0;HaplotypeScore=167.7188;InbreedingCoeff=0.2032;MQ=46.54;MQ0=16;MQRankSum=-1.271;QD=6.41;ReadPosRankSum=-1.802;VQSLOD=2.4634;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:31,0:29:52.14:52,0,288	1/1:6,0:5:13.53:93,14,0	0/0:28,0:12:20.78:0,21,325	0/0:32,0:13:21.58:0,22,243	0/0:31,0:31:38.47:0,38,390	0/1:19,0:19:28.70:29,0,158	0/1:17,1:17:79.66:80,0,135	0/1:39,0:39:99:110,0,312	0/1:16,0:13:43.20:43,0,50	0/1:22,0:22:26.65:119,0,27	1/1:16,1:17:8.38:153,8,0	0/0:14,0:14:14.72:0,15,240	0/0:16,0:14:16.01:0,16,154	0/1:9,0:8:1.05:1,0,23	1/1:14,4:17:7.72:210,8,0	1/1:14,2:16:38.47:277,38,0	1/1:15,5:20:2.01:348,2,0	0/1:12,1:12:5.12:156,0,5	0/1:41,0:37:1.66:2,0,442	0/0:25,0:24:13.78:0,14,351	0/0:5,0:3:2.99:0,3,34	0/0:17,0:17:36.93:0,37,289	1/1:11,5:15:20.42:247,20,0	1/1:12,1:12:20.66:162,21,0	0/0:20,0:20:40.77:0,41,353	0/1:17,2:17:64.96:110,0,65	0/1:20,3:23:21.40:202,0,21	1/1:6,1:6:14.69:117,15,0
chr10	10909450	.	TTG	T	1462.27	PASS	AB=1.000;AC=28;AF=0.500;AN=56;BaseQRankSum=-0.805;DP=553;FS=7.477;HRun=0;HaplotypeScore=162.4614;InbreedingCoeff=-0.1926;MQ=46.15;MQ0=17;MQRankSum=-3.479;QD=3.37;ReadPosRankSum=-2.772;VQSLOD=1.5007;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:31,0:29:34.14:34,0,205	0/1:6,0:5:7.60:26,0,8	0/0:29,0:12:17.73:0,18,243	0/0:35,0:13:21.80:0,22,195	0/1:32,0:32:30.20:30,0,130	0/1:19,0:19:30.58:31,0,111	0/1:17,0:16:79.45:79,0,125	0/1:41,0:41:99:154,0,239	0/1:17,0:14:14.21:52,0,14	0/1:21,0:21:47.97:48,0,69	1/1:17,0:17:6.45:138,6,0	0/0:14,0:14:2.41:0,2,117	0/1:15,0:13:9.66:10,0,54	0/1:9,0:8:4.59:5,0,17	1/1:16,2:17:5.83:178,6,0	1/1:14,2:16:9.60:153,10,0	1/1:20,0:20:1.82:221,2,0	0/1:13,0:12:16.22:85,0,16	0/1:40,0:36:51.08:51,0,336	0/1:25,0:24:7.98:8,0,224	0/0:4,0:2:3.01:0,3,34	0/0:17,0:17:22.52:0,23,110	1/1:14,1:14:17.85:126,18,0	1/1:13,0:12:11.45:72,11,0	0/0:20,0:20:27.65:0,28,162	0/1:19,0:17:38.24:38,0,48	0/1:23,0:23:29.15:69,0,29	0/1:7,0:6:4.14:19,0,4
chr10	10909451	.	TG	T	1978.44	PASS	AB=0.989;AC=33;AF=0.589;AN=56;BaseQRankSum=0.323;DP=549;FS=7.311;HRun=1;HaplotypeScore=153.0810;InbreedingCoeff=-0.4046;MQ=44.85;MQ0=17;MQRankSum=-0.178;QD=3.82;ReadPosRankSum=-0.215;VQSLOD=-0.1125;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:31,0:29:99:130,0,166	0/1:6,0:5:11.24:12,0,11	0/0:27,0:11:6.67:0,7,160	0/1:34,1:13:7.29:7,0,110	0/1:31,1:32:6.96:121,0,7	0/1:19,0:19:89.78:116,0,90	0/1:17,0:16:99:121,0,104	0/1:38,3:41:99:231,0,128	0/1:18,0:15:5.84:140,0,6	0/1:21,0:21:33.95:34,0,59	1/1:17,0:17:15.07:134,15,0	0/1:13,1:14:37.98:38,0,44	1/1:14,0:12:10.06:52,10,0	1/1:8,1:8:1:7,1,0	0/1:18,0:17:1.14:94,0,1	0/1:16,0:16:15.50:86,0,15	1/1:18,0:18:6.77:170,7,0	0/1:14,0:13:21.51:64,0,22	0/1:39,1:36:99:160,0,203	0/1:25,0:24:47.17:47,0,110	0/0:4,0:2:3.01:0,3,32	1/1:16,1:17:13.61:92,14,0	1/1:15,0:14:12.75:94,13,0	1/1:13,0:12:7.95:66,8,0	0/1:20,0:20:14.81:67,0,15	0/1:19,0:17:15.14:15,0,44	0/1:22,0:22:29.97:30,0,53	0/1:7,0:6:6.49:6,0,26
chr10	10909456	.	TTG	T	1095.43	PASS	AB=0.981;AC=24;AF=0.429;AN=56;BaseQRankSum=2.679;DP=563;FS=28.726;HRun=0;HaplotypeScore=163.5622;InbreedingCoeff=-0.3002;MQ=43.34;MQ0=18;MQRankSum=-5.374;QD=2.60;ReadPosRankSum=-2.570;VQSLOD=1.0222;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:25:32.67:0,33,139	0/0:6,0:5:5.37:0,5,40	0/1:30,0:12:4.64:5,0,266	0/0:35,0:12:0.74:0,1,128	0/1:31,0:31:46.12:46,0,263	0/1:19,0:19:0.21:0,0,79	0/1:16,0:15:39.58:40,0,44	0/1:36,0:36:99:163,0,300	1/1:16,0:13:0.92:44,1,0	0/0:20,0:20:0.53:0,1,120	1/1:16,1:17:5.65:95,6,0	0/0:14,0:14:11.45:0,11,305	0/0:14,0:12:3.44:0,3,132	0/1:9,0:8:0.15:0,0,14	1/1:20,3:22:5.14:95,5,0	0/1:18,1:19:36.05:94,0,36	1/1:20,0:20:0.86:145,1,0	0/1:18,0:17:48.01:48,0,91	0/1:38,0:34:99:118,0,323	0/1:27,0:26:36.11:36,0,264	0/0:4,0:2:3.01:0,3,37	0/1:17,0:17:5.91:6,0,153	0/1:17,0:16:19.41:68,0,19	0/1:13,2:14:11.60:75,0,12	0/0:22,0:22:35.90:0,36,320	0/1:16,3:17:99:108,0,110	0/1:27,0:27:39.67:40,0,55	0/1:7,0:6:15.93:16,0,46
chr10	10909459	.	TTTTTTTTTG	T	2074.10	PASS	AB=0.961;AC=21;AF=0.375;AN=56;BaseQRankSum=-0.154;DP=576;FS=6.377;HRun=0;HaplotypeScore=220.3971;InbreedingCoeff=0.0803;MQ=44.11;MQ0=19;MQRankSum=-1.379;QD=6.91;ReadPosRankSum=-3.077;VQSLOD=1.6963;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:26:30.27:30,0,359	1/1:6,0:5:3.08:51,3,0	0/0:31,0:13:9.71:0,10,632	0/0:33,0:11:4.77:0,5,307	0/0:30,0:30:49.92:0,50,719	0/1:20,0:20:9.33:9,0,420	0/1:17,0:16:4.30:4,0,255	0/0:35,0:35:62.92:0,63,727	0/1:17,0:14:40.38:40,0,282	0/1:21,0:21:66.60:110,0,67	1/1:15,2:17:5.59:164,6,0	0/0:14,0:14:39.07:0,39,889	0/0:13,0:11:24.06:0,24,414	0/0:9,0:8:9.03:0,9,127	0/1:20,2:21:53.21:176,0,53	1/1:19,0:19:9.34:254,9,0	0/1:19,2:21:11.25:260,0,11	0/1:18,2:19:99:256,0,121	0/0:37,0:33:78.22:0,78,1505	0/0:29,0:28:37.35:0,37,785	0/0:4,0:2:3.01:0,3,38	0/0:17,0:17:28.20:0,28,534	0/1:18,0:17:39.93:72,0,40	1/1:17,2:18:26.08:312,26,0	0/0:23,0:23:51.94:0,52,805	0/1:19,1:18:35.05:205,0,35	1/1:27,1:28:8.38:186,8,0	0/1:6,1:6:9.43:118,0,9
chr10	10909464	.	TTTTGTTTTGTTTTTG	T	4271.71	PASS	AB=1.000;AC=27;AF=0.482;AN=56;BaseQRankSum=-6.843;DP=550;FS=0.417;HRun=0;HaplotypeScore=243.6574;InbreedingCoeff=0.5401;MQ=44.58;MQ0=20;MQRankSum=-1.682;QD=12.98;ReadPosRankSum=-8.833;VQSLOD=1.2633;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:28:33.63:0,34,1388	1/1:5,0:4:6.45:77,6,0	0/0:32,0:12:28.27:0,28,681	0/0:35,0:11:7.83:0,8,372	0/1:26,0:26:71.93:72,0,859	0/0:19,0:19:21.88:0,22,1183	0/0:16,0:16:32.02:0,32,812	0/1:34,0:34:79.26:79,0,849	0/0:16,0:13:27.49:0,27,760	1/1:10,9:19:24.37:304,24,0	1/1:7,9:16:28.10:345,28,0	0/0:14,0:14:28.54:0,29,1003	0/0:13,0:11:18.04:0,18,487	0/0:10,0:9:9.03:0,9,181	1/1:25,0:24:31.22:414,31,0	1/1:20,0:20:35.02:507,35,0	1/1:15,0:15:23.05:418,23,0	0/1:20,0:19:52.17:363,0,52	0/1:39,0:35:65.63:66,0,1750	0/1:26,0:25:60.26:60,0,936	0/0:4,0:2:3.01:0,3,69	0/0:13,0:13:9.43:0,9,762	1/1:13,0:13:3.44:117,3,0	1/1:17,0:16:20.99:375,21,0	0/0:18,0:18:8.44:0,8,825	1/1:14,7:19:33.46:457,33,0	1/1:25,0:25:15.21:372,15,0	1/1:8,0:7:12.97:245,13,0
chr10	10909465	.	TTTG	T	3640.85	PASS	AB=1.000;AC=42;AF=0.750;AN=56;BaseQRankSum=-2.623;DP=545;FS=14.499;HRun=0;HaplotypeScore=151.5125;InbreedingCoeff=0.1911;MQ=43.37;MQ0=20;MQRankSum=-1.660;QD=7.49;ReadPosRankSum=-3.044;VQSLOD=1.7517;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,25:28:41.63:784,42,0	1/1:5,0:4:2.51:19,3,0	0/1:35,0:15:1.15:1,0,279	0/0:32,0:9:6.69:0,7,130	1/1:27,0:27:14.57:167,15,0	1/1:3,16:19:35.82:527,36,0	1/1:6,11:16:29.22:427,29,0	0/1:33,0:33:33.14:123,0,33	1/1:6,10:13:22.42:341,22,0	1/1:18,0:18:8.66:56,9,0	1/1:16,0:16:9.38:82,9,0	0/0:14,0:14:21.01:0,21,158	0/0:13,0:11:2.20:0,2,23	1/1:12,0:11:5.49:31,5,0	1/1:25,0:24:19.06:141,19,0	0/1:19,0:19:8.33:51,0,8	1/1:15,0:15:16.42:112,16,0	0/1:19,0:18:42.89:61,0,43	0/1:40,0:36:97.77:98,0,166	0/1:26,0:25:93.54:114,0,94	1/1:4,0:2:0.47:1,0,0	1/1:11,2:13:4.48:97,4,0	0/1:13,0:13:3.47:49,0,3	1/1:16,0:15:12.85:75,13,0	0/1:18,0:18:4.34:4,0,26	1/1:21,0:19:14.40:110,14,0	1/1:24,0:24:5.25:98,5,0	1/1:5,0:4:9.42:72,9,0
chr10	10909466	.	TTG	T	4127.91	PASS	AB=0.995;AC=48;AF=0.857;AN=56;BaseQRankSum=-0.196;DP=538;FS=28.319;HRun=0;HaplotypeScore=140.2759;InbreedingCoeff=0.1408;MQ=43.31;MQ0=20;MQRankSum=-3.457;QD=8.17;ReadPosRankSum=-1.150;VQSLOD=1.2801;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:28:44.16:403,44,0	1/1:4,0:3:3.44:21,3,0	0/1:33,1:15:20.72:21,0,243	0/0:33,0:10:11.89:0,12,138	1/1:26,1:27:42.13:339,42,0	1/1:19,0:19:38.68:287,39,0	1/1:15,1:15:27.70:247,28,0	1/1:32,0:32:21:278,21,0	1/1:16,0:13:24.90:199,25,0	1/1:18,0:18:21.47:125,21,0	1/1:16,0:16:19.18:113,19,0	0/1:13,0:13:25.76:48,0,26	1/1:11,0:9:12.33:69,12,0	1/1:13,0:12:8.46:44,8,0	1/1:25,0:24:36.46:198,36,0	1/1:19,0:19:17.84:196,18,0	1/1:15,0:15:22.40:145,22,0	0/1:20,0:19:40.86:67,0,41	0/1:40,0:36:48.67:283,0,49	0/1:25,0:24:12.63:140,0,13	0/1:4,0:2:0:0,0,0	1/1:12,0:12:28.33:149,28,0	1/1:13,0:13:0.26:56,0,0	1/1:16,0:15:20.33:125,20,0	1/1:17,0:17:9.20:112,9,0	1/1:21,0:19:24.24:148,24,0	1/1:23,1:24:33.72:223,34,0	1/1:5,0:4:11.93:91,12,0
chr10	10909467	.	TG	T	6114.54	PASS	AB=0.986;AC=52;AF=0.929;AN=56;BaseQRankSum=1.062;DP=510;FS=0.000;HRun=1;HaplotypeScore=121.6526;InbreedingCoeff=0.3439;MQ=43.76;MQ0=19;MQRankSum=-3.155;QD=12.82;ReadPosRankSum=1.264;VQSLOD=3.6463;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:28:33.29:320,33,0	1/1:3,0:2:3.85:22,4,0	0/1:33,1:16:12.26:12,0,183	0/0:32,1:10:8.87:0,9,87	1/1:14,12:26:60.80:672,61,0	1/1:18,0:18:38.34:252,38,0	1/1:16,0:15:29.04:192,29,0	1/1:25,4:29:65.10:468,65,0	1/1:16,0:13:29.54:209,30,0	1/1:13,1:14:24.38:144,24,0	1/1:14,0:14:20.78:155,21,0	1/1:10,2:12:29.73:231,30,0	1/1:3,8:9:18.02:211,18,0	1/1:1,12:12:9.01:103,9,0	1/1:23,1:23:40.40:237,40,0	1/1:19,0:19:37.63:274,38,0	1/1:11,0:12:24.89:157,25,0	0/1:18,0:17:14.12:74,0,14	1/1:32,5:34:68.53:511,69,0	1/1:22,2:23:29.64:238,30,0	1/1:5,0:3:3.47:26,3,0	1/1:3,9:12:29.35:323,29,0	1/1:12,0:13:22.63:144,23,0	1/1:16,0:15:20.55:148,21,0	1/1:7,8:15:38.82:438,39,0	1/1:17,0:15:25.25:204,25,0	1/1:23,1:24:38.47:262,38,0	1/1:5,0:4:11.90:87,12,0
chr10	10909468	.	G	GT	1444.13	PASS	AB=0.935;AC=32;AF=0.571;AN=56;BaseQRankSum=-0.390;DP=518;FS=17.926;HRun=9;HaplotypeScore=138.5669;InbreedingCoeff=0.4848;MQ=43.82;MQ0=18;MQRankSum=-0.704;QD=4.42;ReadPosRankSum=-3.117;VQSLOD=-0.5063;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:28:15.77:0,16,52	1/1:2,1:2:3.01:35,3,0	0/1:33,0:16:4.78:5,0,184	0/0:34,0:10:9.60:0,10,97	0/1:26,0:26:14.45:34,0,14	0/0:18,0:18:14.77:0,15,47	0/0:17,0:16:5.40:0,5,23	0/1:29,0:29:0.74:4,0,1	0/0:17,0:14:12.74:0,13,37	1/1:13,1:14:10.24:119,10,0	1/1:12,2:14:11.33:84,11,0	0/0:12,0:12:14.73:0,15,47	0/0:11,0:9:6.60:0,7,21	1/1:14,0:13:3.98:25,4,0	1/1:14,10:23:20.16:150,20,0	1/1:9,10:19:21.83:219,22,0	1/1:11,2:13:11.67:159,12,0	0/1:6,11:16:4.61:144,0,5	0/0:37,0:34:0.82:0,1,27	0/1:24,0:23:0.09:26,0,0	1/1:7,0:5:3:25,3,0	0/1:12,0:12:5.14:6,0,5	1/1:8,6:14:7.90:61,8,0	1/1:7,10:16:17.94:162,18,0	0/0:15,0:15:7.66:0,8,24	1/1:13,4:15:19.26:186,19,0	1/1:23,2:25:3.62:85,4,0	1/1:5,0:4:8.99:94,9,0
chr10	10916430	.	G	GT	4169.26	PASS	AB=0.697;AC=42;AF=0.750;AN=56;BaseQRankSum=-4.896;DP=460;FS=0.000;HRun=13;HaplotypeScore=52.3690;InbreedingCoeff=0.5155;MQ=68.82;MQ0=0;MQRankSum=-2.051;QD=11.03;ReadPosRankSum=0.859;VQSLOD=2.9996;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:23,2:25:17.05:17,0,287	1/1:2,5:7:12.01:111,12,0	0/0:21,0:10:7.53:0,8,55	0/0:21,0:15:11.63:0,12,74	1/1:6,14:21:29.80:235,30,0	0/0:20,1:22:21.40:0,21,274	0/0:8,0:8:17.84:0,18,123	1/1:11,26:38:30.14:499,30,0	0/0:9,0:9:20.75:0,21,139	1/1:4,15:19:10.79:358,11,0	1/1:5,11:18:32.56:253,33,0	0/1:3,7:10:5.54:92,0,6	1/1:4,12:16:26.97:240,27,0	1/1:4,8:12:9.01:84,9,0	0/1:6,8:14:2.63:111,0,3	1/1:2,7:9:15.02:139,15,0	1/1:3,21:25:41.76:363,42,0	1/1:10,17:30:7.44:239,7,0	1/1:8,12:20:15.05:230,15,0	0/1:6,8:14:2.38:129,0,2	1/1:7,0:7:8.99:75,9,0	1/1:0,1:1:3:28,3,0	1/1:3,16:19:6.45:202,6,0	1/1:5,5:10:8.95:74,9,0	1/1:6,16:24:2.05:216,2,0	1/1:6,8:14:2.93:152,3,0	1/1:3,12:15:23.79:210,24,0	1/1:3,7:10:12.01:112,12,0
chr10	10916821	.	GGA	G	4404.02	PASS	AB=1.000;AC=37;AF=0.661;AN=56;BaseQRankSum=6.974;DP=472;FS=3.698;HRun=0;HaplotypeScore=95.8223;InbreedingCoeff=-0.2683;MQ=68.04;MQ0=0;MQRankSum=-0.375;QD=9.62;ReadPosRankSum=9.014;VQSLOD=3.7912;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:19,0:19:6.57:76,0,7	0/1:7,0:7:9.91:37,0,10	0/0:6,0:5:11.84:0,12,93	0/0:8,0:6:0.97:0,1,20	1/1:4,8:12:24.06:331,24,0	0/1:22,0:22:85.50:110,0,86	0/1:20,0:20:26.30:129,0,26	0/1:40,0:40:99:165,0,231	1/1:18,0:18:6.64:102,7,0	0/1:16,0:16:79.09:81,0,79	0/1:9,0:9:12.91:13,0,38	1/1:0,19:19:48.16:706,48,0	1/1:1,14:15:32.47:445,32,0	1/1:3,12:15:27.09:397,27,0	1/1:17,0:17:12.45:129,12,0	0/1:16,0:16:38.04:100,0,38	0/1:22,0:22:43.63:134,0,44	0/1:21,0:21:71.63:115,0,72	0/1:17,0:17:54.03:54,0,76	1/1:15,0:15:22.06:99,22,0	0/1:28,0:28:49.24:127,0,49	1/1:4,10:14:21.02:265,21,0	1/1:16,0:16:6.02:111,6,0	1/1:13,0:13:3.87:89,4,0	1/1:2,11:13:18.03:243,18,0	0/1:11,0:11:30.86:65,0,31	0/1:30,0:30:58.97:194,0,59	0/1:13,0:13:18.42:88,0,18
chr10	10916824	.	GAT	G	9278.51	PASS	AB=1.000;AC=50;AF=0.893;AN=56;BaseQRankSum=0.712;DP=437;FS=1.353;HRun=0;HaplotypeScore=75.1323;InbreedingCoeff=0.2156;MQ=67.90;MQ0=0;MQRankSum=0.312;QD=21.48;ReadPosRankSum=4.633;VQSLOD=5.1349;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,12:16:26.92:311,27,0	1/1:3,4:7:12.04:149,12,0	0/0:5,0:4:3.01:0,3,30	0/1:9,0:6:7.64:8,0,23	1/1:9,0:9:23.69:161,24,0	1/1:4,15:19:41.80:494,42,0	1/1:3,16:19:42.13:520,42,0	1/1:13,25:39:78.07:931,78,0	1/1:1,13:14:30.09:372,30,0	1/1:5,10:15:29.37:369,29,0	1/1:3,5:8:6.02:74,6,0	1/1:19,0:19:47.42:319,47,0	0/1:17,0:17:6.42:176,0,6	1/1:13,0:13:6.69:157,7,0	1/1:1,14:15:39.08:466,39,0	1/1:3,13:16:30.09:372,30,0	1/1:4,17:21:45.03:557,45,0	1/1:5,13:19:41.96:496,42,0	1/1:5,11:17:35.93:400,36,0	1/1:1,10:12:24.08:297,24,0	1/1:4,17:21:42.13:520,42,0	0/1:13,0:13:3.28:96,0,3	1/1:3,14:17:30.09:372,30,0	1/1:1,13:14:27.08:335,27,0	0/1:13,0:13:4.32:90,0,4	1/1:3,7:10:21:260,21,0	1/1:6,22:28:13.10:625,13,0	1/1:2,9:12:29.99:350,30,0
chr10	10917702	.	TATC	T	3223.06	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=12.065;DP=669;FS=4.993;HRun=0;HaplotypeScore=90.9725;InbreedingCoeff=0.9998;MQ=77.47;MQ0=0;MQRankSum=-3.278;QD=35.03;ReadPosRankSum=1.681;VQSLOD=3.8177;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,32:35:78.22:1215,78,0	0/0:15,0:15:45.15:0,45,993	0/0:14,0:14:42.11:0,42,792	0/0:20,0:20:42.43:0,42,938	0/0:31,0:31:87.28:0,87,1852	1/1:2,24:26:60.20:964,60,0	1/1:1,16:16:42.14:674,42,0	0/0:50,0:50:99:0,132,2763	1/1:1,13:14:33.11:530,33,0	0/0:31,0:31:93.31:0,93,1957	0/0:18,0:18:51.18:0,51,1125	0/0:19,0:19:57.17:0,57,1198	0/0:23,0:23:60.21:0,60,1286	0/0:26,0:26:72.25:0,72,1525	0/0:27,0:27:75.24:0,75,1551	0/0:21,0:21:57.20:0,57,1253	0/0:13,0:13:33.11:0,33,728	0/0:21,0:21:54.19:0,54,1192	0/0:21,0:21:60.20:0,60,1234	0/0:36,0:36:99:0,105,2296	0/0:19,0:19:57.20:0,57,1214	0/0:27,0:27:75.24:0,75,1594	0/0:26,0:26:75.26:0,75,1652	0/0:15,0:15:36.11:0,36,753	0/0:17,0:17:51.18:0,51,1125	0/0:27,0:27:78.26:0,78,1631	0/0:43,0:43:99:0,120,2602	0/0:17,0:17:39.08:0,39,773
chr10	10918556	.	TA	T	5120.32	PASS	AB=0.833;AC=29;AF=0.518;AN=56;BaseQRankSum=11.327;DP=604;FS=2.325;HRun=12;HaplotypeScore=62.2978;InbreedingCoeff=0.8692;MQ=68.41;MQ0=0;MQRankSum=0.350;QD=16.79;ReadPosRankSum=0.662;VQSLOD=6.0388;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,27:34:55.70:605,56,0	0/0:12,1:13:3.83:0,4,220	0/1:12,3:15:67.70:68,0,87	0/0:8,0:7:18.02:0,18,172	1/1:6,24:30:71.69:557,72,0	1/1:7,23:30:32.29:434,32,0	1/1:0,12:13:34.91:261,35,0	1/1:5,23:29:67.73:515,68,0	1/1:2,12:14:29.88:232,30,0	0/0:31,0:31:63.11:0,63,631	0/0:21,1:24:39.63:0,40,550	1/1:3,6:10:5.37:128,5,0	1/1:6,21:28:31.25:416,31,0	1/1:2,18:20:50.80:395,51,0	0/0:24,0:24:63.02:0,63,618	0/0:23,2:25:10.62:0,11,459	0/0:34,0:34:93.09:0,93,924	0/0:27,2:27:19.66:0,20,563	1/1:3,16:19:44.79:348,45,0	1/1:3,20:23:35.14:417,35,0	1/1:0,2:2:5.98:46,6,0	1/1:3,15:18:36.71:281,37,0	0/0:18,0:19:39.05:0,39,383	0/0:16,0:16:42.08:0,42,426	1/1:2,18:20:53.77:418,54,0	0/0:20,0:20:48.09:0,48,483	0/0:28,0:28:75.13:0,75,751	0/0:27,1:28:45.88:0,46,639
chr10	10920413	.	A	AGCTTGG	4099.15	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-5.741;DP=686;FS=6.675;HRun=0;HaplotypeScore=136.5240;InbreedingCoeff=0.9858;MQ=58.37;MQ0=11;MQRankSum=-10.924;QD=41.83;ReadPosRankSum=-3.806;VQSLOD=2.1861;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,126,2701	0/0:6,0:6:18.05:0,18,349	0/0:18,0:8:12.04:0,12,234	0/0:27,0:19:36.05:0,36,620	0/0:22,0:22:54.19:0,54,1150	0/0:22,0:22:51.17:0,51,1084	0/0:27,0:27:72.20:0,72,1435	1/1:22,13:36:57.14:1708,57,0	0/0:23,0:23:57.20:0,57,1233	0/0:27,0:27:57.20:0,57,1233	0/0:24,0:24:48.16:0,48,1026	0/0:27,0:27:69.22:0,69,1440	0/0:27,0:27:72.25:0,72,1556	0/0:26,0:26:75.25:0,75,1564	0/0:35,0:35:99:0,99,2141	0/0:24,0:24:72.25:0,72,1544	0/0:21,0:21:60.21:0,60,1275	0/0:24,0:24:63.22:0,63,1363	1/1:12,5:16:18.05:529,18,0	1/1:9,11:20:36.12:1163,36,0	1/1:15,9:25:24.08:699,24,0	0/0:25,0:25:60.21:0,60,1298	0/0:21,0:21:54.19:0,54,1146	0/0:33,0:33:87.24:0,87,1791	0/0:19,0:19:45.15:0,45,973	0/0:30,0:30:63.21:0,63,1321	0/0:19,0:19:42.14:0,42,894	0/0:10,0:10:24.08:0,24,519
chr10	10921124	.	AATG	A	3205.38	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=9.277;DP=656;FS=0.464;HRun=0;HaplotypeScore=95.4988;InbreedingCoeff=0.9985;MQ=82.84;MQ0=0;MQRankSum=-3.527;QD=35.22;ReadPosRankSum=-0.232;VQSLOD=4.1146;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,25:26:54.18:875,54,0	0/0:13,0:13:39.13:0,39,870	0/0:20,0:20:42.15:0,42,1119	0/0:18,0:18:47.98:0,48,920	0/0:28,0:28:84.25:0,84,1841	1/1:1,17:18:27.09:460,27,0	1/1:2,21:23:60.20:1008,60,0	0/0:27,0:27:78.26:0,78,1713	1/1:0,24:24:60.21:1023,60,0	0/0:35,0:35:99:0,105,2400	0/0:15,0:15:45.15:0,45,1038	0/0:18,0:18:54.19:0,54,1246	0/0:28,0:28:84.27:0,84,1883	0/0:23,0:23:69.24:0,69,1591	0/0:24,0:24:66.23:0,66,1485	0/0:23,1:24:21.07:0,21,1511	0/0:23,0:23:66.22:0,66,1521	0/0:19,0:19:57.18:0,57,1266	0/0:34,0:34:99:0,102,2274	0/0:18,0:18:54.19:0,54,1229	0/0:33,0:33:96.33:0,96,2141	0/0:21,0:21:63.22:0,63,1453	0/0:29,0:29:87.30:0,87,2006	0/0:13,0:13:39.12:0,39,851	0/0:29,0:29:84.29:0,84,1916	0/0:32,0:32:96.31:0,96,2126	0/0:28,0:28:84.27:0,84,1886	0/0:13,0:13:39.13:0,39,891
chr10	10921671	.	G	GT	4884.73	PASS	AB=0.821;AC=52;AF=0.929;AN=56;BaseQRankSum=-3.810;DP=243;FS=0.000;HRun=4;HaplotypeScore=32.6322;InbreedingCoeff=0.2854;MQ=56.00;MQ0=10;MQRankSum=-2.032;QD=21.42;ReadPosRankSum=1.386;VQSLOD=3.5016;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,9:8:15.05:209,15,0	1/1:2,3:5:12.02:141,12,0	0/0:14,0:10:2.05:0,2,141	0/1:5,0:3:0:0,0,0	1/1:4,7:9:12.04:154,12,0	1/1:1,9:8:21.07:292,21,0	1/1:1,2:2:3.01:42,3,0	1/1:1,12:6:18.06:248,18,0	1/1:1,8:8:12.04:167,12,0	1/1:4,17:16:39.12:496,39,0	1/1:6,3:8:14.90:162,15,0	1/1:0,2:1:3.01:32,3,0	1/1:1,1:2:5.23:39,5,0	1/1:4,2:6:9.48:83,9,0	0/1:4,5:9:3.21:91,0,3	1/1:5,9:14:30.08:341,30,0	1/1:3,4:7:13.28:152,13,0	1/1:3,3:6:10.22:112,10,0	1/1:4,6:9:15.05:210,15,0	1/1:3,13:13:36.12:500,36,0	1/1:0,3:2:6.02:83,6,0	1/1:2,3:5:11.95:131,12,0	1/1:3,6:8:20.89:233,21,0	1/1:3,2:5:4.52:33,5,0	1/1:1,9:8:21.07:283,21,0	1/1:6,7:9:21.01:238,21,0	1/1:3,6:9:18.01:193,18,0	1/1:0,6:6:18.05:216,18,0
chr10	10921676	.	CT	C	936.33	PASS	AB=0.746;AC=31;AF=0.554;AN=56;BaseQRankSum=-1.543;DP=252;FS=12.441;HRun=13;HaplotypeScore=46.9184;InbreedingCoeff=0.4059;MQ=58.91;MQ0=11;MQRankSum=-3.452;QD=5.61;ReadPosRankSum=-0.593;VQSLOD=0.4955;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:9,1:8:11.97:0,12,106	1/1:3,4:7:5.70:34,6,0	0/1:16,0:10:2.20:2,0,57	0/0:7,1:4:2.52:0,3,25	1/1:2,0:11:10.87:63,11,0	0/0:9,0:7:9:0,9,83	0/0:4,0:3:5.96:0,6,48	0/0:13,0:6:10.73:0,11,72	0/0:9,0:9:14.86:0,15,129	1/1:7,12:14:23.36:152,23,0	1/1:5,4:8:8.04:78,8,0	1/1:0,2:1:2.74:12,3,0	0/1:1,1:2:6.83:7,0,8	0/1:4,1:5:3.43:3,0,14	0/1:7,2:9:22.61:23,0,34	1/1:3,10:13:30.85:158,31,0	1/1:5,2:7:4.12:39,4,0	0/1:4,2:6:17.71:40,0,18	0/0:9,0:8:11.82:0,12,92	0/0:17,1:16:29.84:0,30,267	0/0:3,0:2:3:0,3,29	1/1:3,3:6:10.09:73,10,0	1/1:6,5:10:8.64:71,9,0	0/1:2,3:5:4.62:41,0,5	1/1:4,0:8:13.69:76,14,0	1/1:6,5:7:14.76:101,15,0	0/1:1,8:9:10.29:71,0,10	1/1:1,5:6:14.25:74,14,0
chr10	10922071	.	C	CTG	31723.82	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-5.709;DP=701;FS=1.941;HRun=0;HaplotypeScore=88.5132;InbreedingCoeff=0.9955;MQ=76.08;MQ0=1;MQRankSum=-9.279;QD=48.66;ReadPosRankSum=6.602;VQSLOD=6.0813;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,56:59:99:2640,141,0	1/1:1,7:7:18.06:337,18,0	0/0:17,0:17:51.17:0,51,731	0/0:32,0:32:61.75:0,62,1081	1/1:2,19:21:51.17:955,51,0	1/1:0,15:15:42.14:786,42,0	1/1:0,15:15:30.02:561,30,0	1/1:7,22:31:78.21:1349,78,0	1/1:1,26:27:75.26:1395,75,0	1/1:2,24:26:72.23:1316,72,0	1/1:0,23:23:57.20:1067,57,0	1/1:1,29:30:81.10:1517,81,0	1/1:2,23:25:69.24:1292,69,0	1/1:2,27:29:84.29:1532,84,0	1/1:2,26:28:78.27:1453,78,0	1/1:0,24:25:66.23:1236,66,0	1/1:1,42:43:99:2188,117,0	1/1:1,18:19:45.15:842,45,0	1/1:0,13:13:39.12:681,39,0	1/1:1,28:28:72.25:1347,72,0	1/1:2,30:32:78.27:1461,78,0	1/1:0,17:16:48.16:899,48,0	1/1:0,17:17:48.16:899,48,0	1/1:2,36:38:99:1963,105,0	1/1:1,20:20:54.19:1011,54,0	1/1:2,21:22:63.17:1144,63,0	1/1:0,21:22:60.02:1123,60,0	1/1:0,15:15:39.13:730,39,0
chr10	10922629	.	C	CTAGG	8748.54	PASS	AB=1.000;AC=34;AF=0.654;AN=52;BaseQRankSum=-10.840;DP=792;FS=2.417;HRun=0;HaplotypeScore=141.5805;InbreedingCoeff=0.7534;MQ=71.29;MQ0=12;MQRankSum=3.201;QD=18.42;ReadPosRankSum=-0.988;VQSLOD=4.6930;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:17.98:0,18,160	1/1:6,11:18:24:492,24,0	./.	./.	0/0:41,0:40:26.77:0,27,245	0/0:34,0:35:18.03:0,18,182	0/0:31,0:31:5.63:0,6,65	1/1:27,0:26:11.92:98,12,0	0/0:27,0:27:21.97:0,22,206	1/1:14,15:30:45.13:979,45,0	1/1:13,10:23:23.91:407,24,0	0/1:26,0:26:28.01:28,0,293	0/0:26,0:26:24.03:0,24,248	0/1:13,0:13:14.97:15,0,140	1/1:15,15:30:39.13:904,39,0	1/1:18,19:37:24.55:563,25,0	1/1:15,12:26:21.07:482,21,0	1/1:8,10:18:12.04:275,12,0	1/1:18,0:17:15.03:289,15,0	1/1:21,0:21:30.09:650,30,0	1/1:39,0:39:45.53:838,46,0	0/0:21,0:21:31.31:0,31,313	1/1:15,5:21:6.02:141,6,0	1/1:10,15:27:21.07:493,21,0	0/0:24,0:24:36.06:0,36,360	1/1:16,13:30:45.13:945,45,0	1/1:21,24:46:48.62:1078,49,0	1/1:10,13:23:3.01:70,3,0
chr10	10922666	.	TAGGTAGGA	T	4210.28	PASS	AB=1.000;AC=18;AF=0.321;AN=56;BaseQRankSum=-6.838;DP=740;FS=7.130;HRun=0;HaplotypeScore=185.4961;InbreedingCoeff=0.1449;MQ=57.11;MQ0=20;MQRankSum=-2.735;QD=10.88;ReadPosRankSum=-4.716;VQSLOD=1.9234;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:2,28:30:3.32:442,3,0	0/0:19,0:19:45.07:0,45,928	0/0:27,0:15:24.03:0,24,261	0/0:28,0:13:32.74:0,33,330	0/1:32,0:32:99:220,0,845	1/1:2,27:29:33.11:794,33,0	1/1:3,29:32:17.68:356,18,0	0/1:36,0:34:99:459,0,236	1/1:2,26:28:33.11:803,33,0	0/0:28,0:28:77.92:0,78,1984	0/0:17,0:17:42.05:0,42,833	0/1:26,0:25:99:104,0,1330	0/1:16,0:16:66.82:67,0,881	0/1:19,0:19:99:113,0,802	0/0:25,0:25:60.14:0,60,1744	0/0:33,0:33:59.97:0,60,1345	0/0:26,0:24:45.01:0,45,980	0/0:19,0:19:33.06:0,33,657	0/1:21,0:16:99:116,0,467	0/1:22,0:22:58.80:59,0,853	0/1:43,0:43:99:272,0,1364	0/1:26,0:26:99:216,0,1111	0/0:16,0:16:31.90:0,32,420	0/0:34,0:34:66.05:0,66,1447	0/1:27,0:27:99:191,0,1253	0/0:25,0:25:75.12:0,75,1808	0/0:33,0:33:69.45:0,69,2010	0/0:22,0:22:27.01:0,27,485
chr10	10922676	.	GGAAA	G	315.35	PASS	AB=0.976;AC=10;AF=0.179;AN=56;BaseQRankSum=6.832;DP=710;FS=2.883;HRun=0;HaplotypeScore=152.0926;InbreedingCoeff=0.1545;MQ=58.44;MQ0=11;MQRankSum=-4.809;QD=1.47;ReadPosRankSum=-1.962;VQSLOD=1.9492;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:30:22.52:77,0,23	0/0:17,0:17:1.72:0,2,605	0/0:27,0:15:32.27:0,32,636	0/0:32,0:18:45.75:0,46,851	0/0:27,0:27:48.59:0,49,632	1/1:28,0:28:2.77:83,3,0	0/1:30,0:30:12.07:12,0,36	0/0:36,0:35:24.01:0,24,103	1/1:26,0:26:7:106,7,0	0/0:29,0:29:15.80:0,16,1511	0/1:15,0:15:17.63:18,0,607	0/0:24,0:23:52.90:0,53,865	0/0:18,0:18:37.77:0,38,652	0/0:17,0:17:33.08:0,33,516	0/0:23,0:23:57.87:0,58,1322	0/0:28,0:28:54.12:0,54,877	0/0:27,0:25:49.97:0,50,924	0/0:19,0:19:33.30:0,33,594	0/0:20,0:19:22.29:0,22,268	0/1:19,3:22:82.04:82,0,430	0/1:40,1:41:20.91:21,0,633	0/0:28,0:28:48.56:0,49,843	0/0:16,0:16:39.56:0,40,625	0/0:33,0:33:72.14:0,72,1313	0/0:25,0:25:52.47:0,52,943	0/1:23,0:23:58.40:58,0,1106	0/0:32,0:32:78.20:0,78,1397	0/0:16,0:16:27.09:0,27,521
chr10	10922939	.	TCC	T	1009.06	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=-4.116;DP=475;FS=7.396;HRun=3;HaplotypeScore=159.9510;InbreedingCoeff=0.6580;MQ=48.50;MQ0=6;MQRankSum=3.328;QD=8.27;ReadPosRankSum=0.426;VQSLOD=-0.0158;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:35.68:0,36,204	0/0:13,0:13:3.56:0,4,131	0/0:9,0:5:15.05:0,15,272	0/0:11,0:8:21.04:0,21,315	1/1:27,1:28:41.83:337,42,0	0/1:16,0:16:15.91:16,0,134	0/0:15,5:20:20.62:0,21,223	0/0:24,0:24:68:0,68,518	0/0:16,0:16:3.17:0,3,107	0/0:17,0:17:44.63:0,45,410	0/0:17,0:16:17.83:0,18,129	1/1:15,0:15:26.23:228,26,0	1/1:15,2:17:16.82:264,17,0	0/1:10,0:10:11.54:106,0,12	0/0:15,0:15:24.64:0,25,278	0/0:20,0:19:36.67:0,37,409	0/0:11,0:10:15.37:0,15,169	0/0:11,0:10:10.71:0,11,98	0/0:18,0:17:31.25:0,31,337	0/0:21,0:19:41.21:0,41,333	0/0:16,0:15:14.06:0,14,74	1/1:7,1:8:11.22:88,11,0	0/0:22,0:21:19.77:0,20,299	0/1:13,0:12:1.30:1,0,130	1/1:13,2:14:15.01:144,15,0	0/0:24,0:23:62.98:0,63,565	0/0:22,0:20:25.98:0,26,319	0/0:13,0:11:17.79:0,18,166
chr10	10922945	.	CCT	C	3194.91	PASS	AB=0.897;AC=25;AF=0.446;AN=56;BaseQRankSum=-2.204;DP=500;FS=24.793;HRun=0;HaplotypeScore=155.1720;InbreedingCoeff=0.4229;MQ=42.38;MQ0=6;MQRankSum=0.186;QD=12.06;ReadPosRankSum=8.305;VQSLOD=1.3782;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:6.20:0,6,61	1/1:6,6:12:13.80:192,14,0	0/0:8,0:4:12.04:0,12,225	0/0:7,0:4:12.04:0,12,210	0/0:32,0:32:7.73:0,8,42	0/0:22,0:22:6.88:0,7,60	1/1:21,0:21:2.16:4,2,0	0/0:34,0:34:58.13:0,58,416	0/1:16,0:16:0.05:0,0,20	0/1:17,4:21:99:218,0,123	1/1:3,11:13:9:105,9,0	0/0:19,0:19:10.27:0,10,99	0/1:17,0:17:18.07:18,0,116	0/0:10,0:10:5.70:0,6,81	1/1:9,6:15:8.36:391,8,0	1/1:11,8:18:41.95:514,42,0	1/1:10,1:10:14.49:251,14,0	0/1:10,0:9:2.43:155,0,2	0/0:18,0:17:21.11:0,21,235	0/0:21,0:19:10.69:0,11,81	0/0:16,0:15:3.09:0,3,20	0/0:14,0:14:2.83:0,3,28	1/1:19,4:22:35.23:428,35,0	1/1:11,3:13:10.66:177,11,0	0/1:18,0:17:3.46:3,0,63	0/1:9,16:23:97.74:522,0,98	0/1:15,4:17:3.91:280,0,4	1/1:4,6:8:9.03:118,9,0
chr10	10922949	.	CCT	C	577.56	PASS	AB=0.993;AC=23;AF=0.411;AN=56;BaseQRankSum=3.220;DP=511;FS=34.937;HRun=0;HaplotypeScore=165.2528;InbreedingCoeff=0.2703;MQ=42.11;MQ0=7;MQRankSum=-0.124;QD=2.25;ReadPosRankSum=6.566;VQSLOD=1.1479;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:11.93:0,12,87	0/1:11,0:11:10.45:10,0,11	0/0:8,0:4:12.04:0,12,202	0/0:7,0:4:12.04:0,12,184	0/0:33,0:33:3.31:0,3,27	0/0:22,0:22:8.63:0,9,64	1/1:21,0:21:0.69:2,1,0	0/0:36,0:36:56.63:0,57,364	0/0:16,0:16:0.56:0,1,19	0/1:22,0:22:17.49:17,0,166	1/1:14,1:14:3.14:16,3,0	0/0:19,0:19:9.72:0,10,92	0/1:16,0:16:18.50:19,0,98	0/0:11,0:11:5.70:0,6,81	1/1:16,1:17:3.11:102,3,0	1/1:18,0:17:27.72:141,28,0	1/1:11,0:10:9.53:70,10,0	0/1:11,0:10:3.64:32,0,4	0/0:15,0:14:11.57:0,12,185	0/0:19,0:17:13.89:0,14,88	0/0:13,0:12:1.25:0,1,4	0/0:20,0:20:6.75:0,7,94	1/1:23,1:23:3.58:118,4,0	1/1:15,0:14:9.45:53,9,0	0/1:18,0:17:6.07:6,0,40	0/1:27,0:25:95.25:95,0,133	0/1:19,1:18:26.28:26,0,57	1/1:11,0:8:9.20:37,9,0
chr10	10923777	.	TTG	T	1458.91	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=1.540;DP=604;FS=3.561;HRun=0;HaplotypeScore=138.5697;InbreedingCoeff=0.7064;MQ=58.33;MQ0=11;MQRankSum=1.983;QD=10.50;ReadPosRankSum=-0.585;VQSLOD=3.1807;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:17.22:0,17,169	0/0:11,0:11:29.98:0,30,356	0/0:28,0:5:15.01:0,15,176	0/0:33,0:15:27.69:0,28,334	0/0:8,0:8:2.88:0,3,44	0/0:16,0:16:9.31:0,9,62	0/0:22,0:22:14.30:0,14,132	1/1:1,20:21:57.03:722,57,0	0/0:17,0:17:5.08:0,5,74	0/0:14,0:14:39.04:0,39,489	0/0:9,0:9:20.96:0,21,277	0/1:24,0:24:11.96:12,0,34	0/0:20,0:19:18.74:0,19,157	0/0:20,0:20:7.53:0,8,55	0/0:23,0:23:56.28:0,56,569	0/0:27,0:27:63.10:0,63,646	0/0:28,0:28:53.20:0,53,693	0/0:29,0:29:75.40:0,75,831	1/1:1,15:16:41.70:502,42,0	1/1:1,19:19:18.05:218,18,0	1/1:2,56:58:14.19:163,14,0	0/0:14,0:13:2.31:0,2,34	0/0:13,0:13:32.84:0,33,368	0/0:34,0:34:47.67:0,48,674	0/0:16,0:16:8.98:0,9,74	0/0:17,0:17:44.97:0,45,585	0/0:23,0:23:59.47:0,59,646	0/0:6,0:6:11.49:0,11,115
chr10	10923781	.	G	GCACA	1109.03	PASS	AB=0.809;AC=16;AF=0.286;AN=56;BaseQRankSum=1.291;DP=595;FS=0.000;HRun=0;HaplotypeScore=157.3234;InbreedingCoeff=0.5493;MQ=54.58;MQ0=11;MQRankSum=0.348;QD=5.66;ReadPosRankSum=-0.530;VQSLOD=2.4122;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:33,2:35:18.97:228,0,19	0/0:12,0:12:27.09:0,27,436	0/0:27,0:4:8.98:0,9,107	0/0:30,0:12:14.85:0,15,238	1/1:8,0:7:2.46:24,2,0	0/1:8,8:20:1.14:132,0,1	0/1:11,8:22:24.29:144,0,24	0/0:20,0:20:24.82:0,25,70	1/1:13,3:17:8.21:164,8,0	0/0:13,0:13:36.09:0,36,541	0/0:7,0:7:21.02:0,21,293	1/1:21,0:22:12.10:89,12,0	1/1:19,0:19:4.34:233,4,0	1/1:10,0:22:3.52:103,4,0	0/0:22,0:22:57.12:0,57,881	0/0:26,0:26:60.15:0,60,957	0/0:30,0:30:66.07:0,66,955	0/0:29,0:29:66.05:0,66,884	0/0:18,0:18:22.46:0,22,101	0/0:19,0:18:13.99:0,14,128	0/0:59,0:59:9.88:0,10,72	1/1:13,0:13:11.12:135,11,0	0/0:12,0:12:30.10:0,30,470	0/0:30,0:30:45.15:0,45,706	0/1:16,0:16:5.78:26,0,6	0/0:18,0:18:41.96:0,42,596	0/0:22,0:22:60.20:0,60,932	0/0:5,0:5:3.01:0,3,43
chr10	10923812	.	CACACACACAT	C	4701.45	PASS	AB=0.993;AC=24;AF=0.429;AN=56;BaseQRankSum=8.041;DP=657;FS=3.104;HRun=0;HaplotypeScore=214.8923;InbreedingCoeff=0.3824;MQ=53.30;MQ0=11;MQRankSum=-3.967;QD=13.87;ReadPosRankSum=4.437;VQSLOD=3.5462;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,101,2668	0/1:12,0:12:10.16:117,0,10	0/0:28,0:15:42.06:0,42,635	0/0:42,0:21:39.58:0,40,927	0/0:17,0:16:15:0,15,273	0/0:28,0:28:42.02:0,42,1202	0/0:22,0:22:36.02:0,36,851	1/1:18,0:18:1.96:198,2,0	0/0:16,0:16:27.05:0,27,847	0/1:18,0:18:13.37:225,0,13	0/1:9,0:9:18.86:36,0,19	0/0:28,0:28:43.74:0,44,1243	0/0:21,0:20:53.33:0,53,1167	0/0:33,0:33:39.05:0,39,1344	1/1:21,0:21:32.01:413,32,0	1/1:24,2:26:38.53:571,39,0	0/1:33,2:35:52.82:457,0,53	0/1:30,0:30:18.63:233,0,19	0/1:10,0:10:4.13:237,0,4	1/1:11,0:10:18.02:490,18,0	1/1:50,2:52:50.24:704,50,0	0/0:18,0:17:27.04:0,27,524	0/1:17,0:17:27.32:189,0,27	1/1:26,0:26:6.02:81,6,0	0/0:17,0:17:12.03:0,12,336	0/1:25,0:25:88.87:279,0,89	1/1:25,0:25:27.29:402,27,0	1/1:4,0:4:6.47:68,6,0
chr10	10923814	.	CACACACAT	C	7594.01	PASS	AB=0.522;AC=30;AF=0.536;AN=56;BaseQRankSum=4.552;DP=623;FS=2.481;HRun=0;HaplotypeScore=188.9392;InbreedingCoeff=0.7818;MQ=55.21;MQ0=8;MQRankSum=-5.252;QD=24.11;ReadPosRankSum=3.033;VQSLOD=4.1293;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,101,2121	1/1:0,11:11:11.42:269,11,0	0/0:28,0:16:45.04:0,45,566	0/0:40,0:22:39.58:0,40,776	0/0:17,0:16:15:0,15,235	0/0:29,0:28:42.02:0,42,992	0/0:22,0:22:36.02:0,36,739	1/1:20,0:20:47.28:363,47,0	0/0:16,0:16:27.05:0,27,689	1/1:0,15:15:26.09:371,26,0	1/1:0,8:8:3.01:88,3,0	0/0:28,0:28:43.09:0,43,990	0/0:19,0:18:47.20:0,47,824	0/0:29,0:29:39.03:0,39,1062	1/1:1,19:20:33.58:900,34,0	1/1:2,23:25:38.90:1043,39,0	0/1:4,31:35:27.07:711,0,27	1/1:0,27:27:18.06:531,18,0	1/1:6,2:8:13.14:231,13,0	1/1:5,6:10:18.02:427,18,0	1/1:43,4:47:67.18:799,67,0	0/0:18,0:17:27.01:0,27,419	1/1:0,14:14:11.10:349,11,0	1/1:1,22:23:6.02:173,6,0	0/0:16,0:16:6.02:0,6,216	0/1:1,19:20:27.04:492,0,27	1/1:2,25:27:26.68:757,27,0	1/1:4,0:4:11.88:88,12,0
chr10	10923820	.	C	CAT	122.20	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=3.817;DP=621;FS=8.647;HRun=0;HaplotypeScore=193.2917;InbreedingCoeff=0.3403;MQ=62.46;MQ0=5;MQRankSum=-1.357;QD=1.30;ReadPosRankSum=-2.003;VQSLOD=1.7234;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:34.94:0,35,539	0/0:11,0:11:11.47:0,11,71	0/0:28,0:23:59.93:0,60,547	0/0:31,0:22:47.09:0,47,505	1/1:19,0:18:20.95:167,21,0	0/0:23,0:22:11.01:0,11,180	0/0:24,0:24:2.34:0,2,283	0/0:22,0:22:59.85:0,60,505	0/1:16,0:16:10.18:10,0,86	0/0:15,0:15:26.73:0,27,198	0/0:8,0:8:2.90:0,3,16	0/0:28,0:28:1.44:0,1,209	0/1:22,0:21:3.79:4,0,187	0/0:28,0:28:21.09:0,21,220	0/0:20,0:20:30.08:0,30,167	0/0:25,0:25:38.01:0,38,219	0/0:34,0:35:26.24:0,26,155	0/0:27,0:27:15.31:0,15,78	0/0:11,0:11:23.93:0,24,193	0/0:12,0:11:23.81:0,24,172	0/0:49,0:49:70.78:0,71,530	0/1:19,0:18:6.10:6,0,166	0/0:14,0:14:11.31:0,11,67	0/0:22,0:22:5.87:0,6,35	1/1:6,12:18:3.01:55,3,0	0/0:20,0:20:33.31:0,33,348	0/0:27,0:27:26.18:0,26,151	0/0:4,0:4:11.96:0,12,92
chr10	10924243	.	A	AAAAG	907.37	PASS	AB=0.715;AC=9;AF=0.161;AN=56;BaseQRankSum=1.644;DP=582;FS=61.160;HRun=0;HaplotypeScore=121.6185;InbreedingCoeff=0.3797;MQ=52.04;MQ0=21;MQRankSum=0.908;QD=7.38;ReadPosRankSum=3.296;VQSLOD=0.2086;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:32:62.99:0,63,607	0/0:16,0:16:13.44:0,13,140	0/0:25,0:13:10.89:0,11,174	0/0:15,0:6:11.96:0,12,108	0/1:15,1:29:52.46:139,0,52	0/0:15,0:14:33.50:0,33,317	0/0:21,0:20:40.69:0,41,288	0/0:31,0:31:28.75:0,29,368	0/0:23,0:23:55.92:0,56,459	0/0:33,0:31:28.22:0,28,252	0/0:19,0:19:20.79:0,21,120	1/1:23,0:22:0.08:247,0,0	1/1:15,0:14:17.88:242,18,0	1/1:4,6:12:2.39:89,2,0	0/0:15,0:15:33.01:0,33,217	0/0:26,0:25:47.35:0,47,324	0/0:25,0:21:10.97:0,11,244	0/0:19,0:18:42.86:0,43,321	0/0:17,0:16:6.95:0,7,208	0/0:17,0:17:32.83:0,33,228	0/0:11,0:11:18.60:0,19,144	0/1:8,0:18:58.48:100,0,58	0/0:19,0:19:15.03:0,15,273	0/0:16,0:14:8.10:0,8,60	0/1:19,2:23:51.90:227,0,52	0/0:28,0:26:8.81:0,9,207	0/0:21,0:21:26.91:0,27,217	0/0:12,0:12:15.32:0,15,158
chr10	10927492	.	CGTGTGT	C	2244.10	PASS	AB=1.000;AC=17;AF=0.315;AN=54;BaseQRankSum=6.095;DP=711;FS=6.574;HRun=0;HaplotypeScore=178.0183;InbreedingCoeff=0.7854;MQ=63.37;MQ0=13;MQRankSum=-6.549;QD=9.93;ReadPosRankSum=2.560;VQSLOD=2.0439;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:34:21.07:282,21,0	0/0:7,0:7:3.01:0,3,92	./.	0/0:45,0:29:4.26:0,4,66	0/0:34,0:35:36.12:0,36,972	1/1:17,0:23:18.06:251,18,0	1/1:17,0:24:9.03:118,9,0	0/0:28,0:28:33.03:0,33,773	1/1:12,0:24:23.57:302,24,0	0/0:24,0:23:25.33:0,25,571	0/0:15,0:14:3.01:0,3,97	1/1:19,10:29:27.08:519,27,0	1/1:16,10:27:21.07:405,21,0	1/1:8,4:12:9.03:169,9,0	0/0:34,0:34:12.96:0,13,232	0/0:23,0:26:6.49:0,6,128	0/0:20,0:20:17.09:0,17,360	0/0:18,0:17:18.06:0,18,494	0/0:19,0:18:12.04:0,12,350	0/0:20,0:22:8.53:0,9,174	0/0:45,0:44:45.15:0,45,1180	1/1:21,11:34:20.92:386,21,0	0/1:17,0:16:0:0,0,0	0/0:35,0:34:5.80:0,6,136	0/0:18,0:18:12.98:0,13,307	0/0:25,0:23:27.56:0,28,744	0/0:17,0:16:13.60:0,14,352	0/0:13,0:12:3.01:0,3,94
chr10	10928181	.	GAA	G	4484.96	PASS	AB=0.637;AC=30;AF=0.536;AN=56;BaseQRankSum=-6.634;DP=561;FS=2.367;HRun=14;HaplotypeScore=83.4009;InbreedingCoeff=0.8364;MQ=59.59;MQ0=11;MQRankSum=1.454;QD=13.76;ReadPosRankSum=6.600;VQSLOD=3.9195;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:42:84.88:0,85,821	1/1:2,2:6:8.74:67,9,0	0/0:11,0:6:14.98:0,15,170	0/0:8,0:4:5.76:0,6,30	0/0:13,0:15:35.39:0,35,418	0/0:6,0:17:31.61:0,32,309	0/0:16,0:28:59.48:0,59,591	1/1:8,10:18:13.84:231,14,0	0/0:9,0:20:27.06:0,27,295	1/1:7,11:20:29.61:308,30,0	1/1:10,13:24:17.34:244,17,0	0/0:10,0:19:15.03:0,15,163	0/0:7,0:18:14.73:0,15,169	0/0:5,0:14:24:0,24,246	1/1:9,21:30:53.71:524,54,0	0/1:8,7:15:3.26:146,0,3	1/1:5,18:26:32.42:383,32,0	1/1:4,20:26:38.89:403,39,0	0/1:5,5:16:3.56:162,0,4	1/1:6,13:18:26.84:297,27,0	1/1:5,15:21:16.81:259,17,0	0/0:12,0:24:41.55:0,42,438	1/1:12,13:26:6.19:273,6,0	1/1:4,16:21:47.52:404,48,0	0/0:13,0:15:32.59:0,33,424	1/1:6,12:19:38.71:340,39,0	1/1:6,13:20:26.64:234,27,0	1/1:5,8:11:6.19:210,6,0
chr10	10929219	.	T	TGCACATGCGCGC	13589.96	PASS	AB=0.581;AC=49;AF=0.907;AN=54;BaseQRankSum=-1.700;DP=577;FS=4.629;HRun=0;HaplotypeScore=267.5244;InbreedingCoeff=0.4130;MQ=41.93;MQ0=7;MQRankSum=-0.432;QD=25.31;ReadPosRankSum=2.791;VQSLOD=3.0562;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:28:11.51:232,12,0	1/1:9,0:9:6.02:136,6,0	./.	0/0:11,0:5:9:0,9,177	1/1:26,0:26:1.98:89,2,0	1/1:21,0:21:24.04:492,24,0	1/1:28,0:28:15.05:591,15,0	1/1:33,0:36:99:2114,102,0	1/1:15,0:15:15.05:408,15,0	1/1:29,0:29:68.24:2409,68,0	1/1:23,0:22:5.98:160,6,0	1/1:29,0:29:35.81:381,36,0	1/1:20,0:20:21.03:390,21,0	1/1:30,0:30:26.48:407,26,0	1/1:22,0:22:21.07:399,21,0	1/1:26,0:26:21.07:621,21,0	0/1:5,10:18:0.93:150,0,1	1/1:9,0:9:24.08:881,24,0	1/1:14,0:13:36.10:768,36,0	1/1:30,0:30:14.43:244,14,0	1/1:19,0:18:2.64:49,3,0	0/0:22,0:22:0.94:0,1,2	1/1:20,0:20:12.03:181,12,0	1/1:3,14:19:3.01:78,3,0	1/1:13,0:13:9.02:191,9,0	1/1:8,13:24:44.99:1212,45,0	1/1:18,0:18:14.59:480,15,0	1/1:10,0:9:15.05:526,15,0
chr10	10929221	.	C	CACAT	7515.42	PASS	AB=1.000;AC=47;AF=0.870;AN=54;BaseQRankSum=-0.730;DP=461;FS=2.526;HRun=0;HaplotypeScore=207.9698;InbreedingCoeff=0.4203;MQ=39.22;MQ0=8;MQRankSum=0.187;QD=17.68;ReadPosRankSum=3.271;VQSLOD=4.7248;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,20:26:8.69:162,9,0	1/1:1,6:7:5.85:121,6,0	./.	0/0:10,0:4:8.92:0,9,120	1/1:0,24:24:3.52:62,4,0	1/1:1,18:21:24.04:424,24,0	1/1:1,22:27:12.04:278,12,0	0/1:14,0:13:46.92:188,0,47	1/1:0,13:14:9.03:164,9,0	1/1:3,19:23:43.82:1407,44,0	1/1:3,17:20:5.93:115,6,0	1/1:2,24:28:36.12:653,36,0	1/1:0,14:15:15.05:310,15,0	1/1:3,24:28:21.07:370,21,0	1/1:2,20:22:21.07:379,21,0	1/1:0,25:25:18.06:366,18,0	1/1:9,2:11:3.01:83,3,0	1/1:0,8:8:24.08:582,24,0	0/0:8,0:7:6.40:0,6,47	1/1:9,0:12:14.55:187,15,0	0/0:9,0:11:0:0,0,0	1/1:1,12:15:0.03:1,0,0	1/1:1,16:17:12.04:189,12,0	1/1:13,2:14:3.01:64,3,0	1/1:0,12:12:9.03:191,9,0	1/1:11,4:15:26.90:594,27,0	1/1:2,14:16:1.68:271,2,0	1/1:2,6:8:15.05:355,15,0
chr10	10929228	.	GCACACACACA	G	3650.71	PASS	AB=0.846;AC=43;AF=0.896;AN=48;BaseQRankSum=4.774;DP=428;FS=3.581;HRun=0;HaplotypeScore=219.0263;InbreedingCoeff=0.3220;MQ=34.72;MQ0=10;MQRankSum=0.176;QD=10.06;ReadPosRankSum=-0.353;VQSLOD=2.7026;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:25:9.50:123,9,0	1/1:6,1:7:3.01:68,3,0	./.	./.	1/1:19,0:22:3.90:68,4,0	1/1:11,1:18:9.71:245,10,0	1/1:20,0:21:3.01:65,3,0	./.	1/1:9,0:12:9.03:119,9,0	1/1:19,2:22:1.98:194,2,0	1/1:15,4:18:6.02:99,6,0	1/1:13,0:25:36.11:498,36,0	1/1:9,0:12:9.03:110,9,0	1/1:20,0:27:21.06:265,21,0	1/1:12,6:19:21.07:400,21,0	1/1:17,5:22:15.05:296,15,0	./.	1/1:6,3:8:6.49:194,6,0	0/1:9,0:9:0:0,0,0	1/1:12,0:12:4.18:85,4,0	0/0:10,0:9:3.01:0,3,131	1/1:12,0:12:0.47:1,0,0	1/1:12,5:17:12.04:199,12,0	1/1:13,2:14:2.66:66,3,0	1/1:9,0:12:6.02:152,6,0	1/1:12,4:16:10.61:271,11,0	0/0:15,0:15:3.74:0,4,12	1/1:6,2:7:1.74:131,2,0
chr10	10929230	.	A	ATG	186.95	PASS	AB=1.000;AC=14;AF=0.259;AN=54;BaseQRankSum=-0.686;DP=351;FS=33.590;HRun=0;HaplotypeScore=186.6403;InbreedingCoeff=0.3569;MQ=35.37;MQ0=11;MQRankSum=-0.040;QD=1.63;ReadPosRankSum=-3.032;VQSLOD=0.8196;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:18:5.91:0,6,18	0/0:5,0:5:5.09:0,5,19	./.	0/0:9,0:3:5.85:0,6,53	0/0:20,0:20:0.33:0,0,3	1/1:14,0:14:1.06:36,1,0	1/1:15,0:15:6.13:19,6,0	0/0:9,0:8:7.22:0,7,156	0/0:8,0:8:1:0,1,5	0/1:19,0:19:3.37:3,0,80	0/0:15,0:14:4.07:0,4,15	0/1:21,0:21:5.34:5,0,8	0/0:9,0:9:4.85:0,5,19	0/0:23,0:23:7.44:0,7,19	0/0:17,0:17:19.20:0,19,91	0/0:13,0:13:7.71:0,8,40	1/1:12,0:12:1.76:5,2,0	0/0:9,0:8:6.28:0,6,41	0/0:8,0:7:12.45:0,12,118	1/1:7,4:11:11.79:230,12,0	0/0:10,0:9:3.01:0,3,47	1/1:8,0:8:0.45:1,0,0	0/0:13,0:13:8.78:0,9,36	1/1:15,0:14:2.60:11,3,0	0/0:10,0:10:0.68:0,1,7	0/0:16,0:16:11.51:0,12,57	0/0:10,0:10:2.63:0,3,36	0/0:7,0:5:3.93:0,4,18
chr10	10929977	.	TA	T	2822.35	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=10.409;DP=471;FS=5.543;HRun=10;HaplotypeScore=49.1146;InbreedingCoeff=0.8728;MQ=67.47;MQ0=1;MQRankSum=-1.293;QD=17.98;ReadPosRankSum=-2.451;VQSLOD=3.3309;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,13:15:35.03:292,35,0	0/0:6,0:6:18.03:0,18,190	0/0:16,0:15:26.87:0,27,265	0/1:15,0:11:6.77:7,0,144	0/0:29,0:29:78.20:0,78,856	1/1:2,16:19:50.03:423,50,0	1/1:3,3:6:8.99:78,9,0	1/1:2,26:28:74.98:651,75,0	1/1:3,25:28:62.98:547,63,0	0/0:24,0:24:60.16:0,60,663	0/0:18,0:18:45.11:0,45,490	0/0:11,0:11:24.06:0,24,266	0/0:16,1:17:22.07:0,22,472	0/0:15,0:15:42.11:0,42,464	0/0:18,0:17:54.15:0,54,597	0/0:21,2:23:5.05:0,5,512	0/0:30,0:30:81.12:0,81,846	0/0:14,0:14:36.10:0,36,398	1/1:4,17:21:50.97:442,51,0	1/1:1,18:19:53.99:469,54,0	1/1:0,4:6:16.07:116,16,0	0/0:5,0:5:15.04:0,15,166	0/0:17,0:17:45.12:0,45,498	0/0:4,0:4:6.02:0,6,66	0/0:18,0:18:48.13:0,48,531	0/0:25,0:25:69.19:0,69,763	0/0:20,0:20:57.13:0,57,620	0/0:4,0:4:12.03:0,12,133
chr10	10930802	.	CCA	C	3719.08	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=9.904;DP=681;FS=10.326;HRun=0;HaplotypeScore=80.2571;InbreedingCoeff=0.9997;MQ=67.48;MQ0=0;MQRankSum=0.570;QD=41.79;ReadPosRankSum=-1.330;VQSLOD=4.4175;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,123,2411	0/0:11,0:11:33.10:0,33,635	0/0:26,0:25:71.58:0,72,1266	0/0:23,0:22:60.20:0,60,1178	0/0:29,0:29:87.28:0,87,1716	0/0:21,0:21:63.21:0,63,1244	0/0:18,0:18:54.19:0,54,1097	1/1:0,21:21:54.11:823,54,0	0/0:28,0:28:84.28:0,84,1671	0/0:23,0:23:69.24:0,69,1371	0/0:21,0:21:63.20:0,63,1213	0/0:26,0:26:78.25:0,78,1516	0/0:22,0:22:66.23:0,66,1340	0/0:33,0:33:99:0,99,1910	0/0:27,0:27:78.25:0,78,1549	0/0:30,0:30:90.31:0,90,1807	0/0:31,0:31:93.26:0,93,1777	0/0:16,0:16:48.16:0,48,952	1/1:1,19:20:54.17:845,54,0	1/1:0,12:12:36.12:586,36,0	1/1:0,36:36:90.31:1465,90,0	0/0:14,0:14:42.14:0,42,852	0/0:20,0:20:60.21:0,60,1217	0/0:42,0:42:99:0,126,2525	0/0:19,0:19:57.20:0,57,1143	0/0:27,0:27:81.26:0,81,1512	0/0:34,0:34:99:0,102,2026	0/0:10,0:10:30.07:0,30,535
chr10	10930965	.	CT	C	1152.93	PASS	AB=0.793;AC=13;AF=0.232;AN=56;BaseQRankSum=4.560;DP=536;FS=11.752;HRun=13;HaplotypeScore=64.8929;InbreedingCoeff=0.3869;MQ=74.25;MQ0=0;MQRankSum=1.071;QD=7.54;ReadPosRankSum=3.301;VQSLOD=1.2498;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,1:41:24.77:0,25,616	0/1:4,1:5:6.88:7,0,102	0/0:18,0:12:12.28:0,12,88	0/0:13,1:14:6.24:0,6,92	1/1:7,17:25:52.71:378,53,0	0/0:16,3:23:0.59:0,1,271	0/0:15,0:17:32.88:0,33,300	0/0:18,0:25:40.67:0,41,255	0/0:11,1:12:2.12:0,2,174	0/0:20,0:22:35.05:0,35,352	0/0:21,1:23:31.80:0,32,494	0/1:8,10:19:23.52:168,0,24	1/1:3,15:18:29.80:219,30,0	1/1:8,12:21:0.50:164,1,0	0/1:11,1:12:0.90:1,0,147	0/0:15,1:18:16.19:0,16,331	0/0:14,1:15:8.12:0,8,231	0/0:15,1:16:14.04:0,14,261	0/0:8,1:25:26.73:0,27,228	0/0:5,0:26:66.77:0,67,416	0/0:3,1:15:6.82:0,7,117	0/1:6,5:12:9.33:95,0,9	0/0:19,2:21:7.20:0,7,377	0/0:18,0:18:39.05:0,39,375	1/1:4,16:21:37.81:269,38,0	0/1:16,2:20:11.10:11,0,196	0/0:19,0:19:43.24:0,43,380	0/0:13,1:15:22.98:0,23,362
chr10	10934009	.	A	AG	1069.96	PASS	AB=0.970;AC=22;AF=0.423;AN=52;BaseQRankSum=8.181;DP=468;FS=0.448;HRun=0;HaplotypeScore=91.9463;InbreedingCoeff=-0.7142;MQ=38.54;MQ0=36;MQRankSum=-2.203;QD=2.58;ReadPosRankSum=-0.734;VQSLOD=2.8327;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:21,0:19:26.37:26,0,274	0/1:11,0:9:51.90:52,0,115	./.	./.	0/1:37,0:28:73.29:73,0,120	0/1:15,0:14:37.62:38,0,111	0/0:10,0:9:8.58:0,9,198	0/1:33,0:29:61.77:107,0,62	0/1:14,0:14:58.47:58,0,100	0/1:17,0:17:99:134,0,199	0/0:20,0:14:3.26:0,3,243	0/1:2,4:5:14.49:65,0,14	0/1:4,1:4:28.39:28,0,37	0/0:5,4:9:12.98:0,13,59	0/1:20,0:17:45.55:46,0,344	0/1:19,0:15:96.31:96,0,185	0/1:21,0:18:52.70:53,0,286	0/1:17,0:15:32.98:33,0,159	0/1:17,0:15:70.77:86,0,71	0/1:33,0:31:96:136,0,96	0/1:6,0:5:1.42:17,0,1	0/0:8,3:7:6.29:0,6,24	0/1:20,0:18:20.60:21,0,327	0/1:31,0:25:19.84:20,0,368	0/1:16,0:15:17.25:17,0,53	0/1:18,0:16:48.26:48,0,313	0/1:24,0:20:54.41:54,0,314	0/1:11,0:9:5.54:6,0,134
chr10	10934013	.	G	GA	210.15	PASS	AB=0.900;AC=5;AF=0.096;AN=52;BaseQRankSum=6.403;DP=450;FS=0.867;HRun=13;HaplotypeScore=104.8819;InbreedingCoeff=0.4259;MQ=38.19;MQ0=35;MQRankSum=-4.663;QD=6.78;ReadPosRankSum=-0.154;VQSLOD=2.6268;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:18:39.07:0,39,433	0/0:11,0:9:18.05:0,18,210	./.	./.	0/0:37,0:28:54.76:0,55,504	0/0:16,0:15:27.24:0,27,269	0/0:9,0:8:21.53:0,22,245	0/0:36,0:32:67.01:0,67,617	0/0:14,0:14:21.78:0,22,216	0/0:15,0:15:39.11:0,39,444	0/0:18,0:12:20.89:0,21,223	0/1:6,0:5:15.47:60,0,15	0/1:3,1:3:19.64:20,0,24	0/1:8,1:9:1.07:88,0,1	0/0:18,0:15:33.09:0,33,377	0/0:17,0:13:25.32:0,25,283	0/0:22,0:19:29.05:0,29,442	0/0:18,0:16:32.62:0,33,329	0/0:13,0:11:22.20:0,22,229	0/0:32,0:30:54.53:0,55,463	0/0:7,0:6:12.68:0,13,104	1/1:8,4:8:20.91:162,21,0	0/0:18,0:16:24.07:0,24,282	0/0:28,0:23:42.55:0,43,465	0/0:15,0:13:2.19:0,2,88	0/0:16,0:14:39.11:0,39,443	0/0:25,0:20:50.47:0,50,531	0/0:10,0:10:18.05:0,18,207
chr10	10934017	.	G	GA	77.97	PASS	AB=0.792;AC=5;AF=0.096;AN=52;BaseQRankSum=7.264;DP=445;FS=3.590;HRun=3;HaplotypeScore=108.4105;InbreedingCoeff=0.4764;MQ=38.07;MQ0=38;MQRankSum=-4.014;QD=2.52;ReadPosRankSum=0.438;VQSLOD=-0.0248;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:17:36.11:0,36,431	0/0:10,0:8:18.05:0,18,208	./.	./.	0/0:38,0:29:61.36:0,61,679	0/0:17,0:16:33.10:0,33,386	0/0:11,0:10:27.55:0,28,326	0/0:36,0:32:75.18:0,75,877	0/0:11,0:11:25.89:0,26,287	0/0:15,0:15:27.08:0,27,311	0/0:18,0:13:21.03:0,21,236	0/1:6,1:6:10.06:10,0,59	0/1:2,1:2:6.52:7,0,30	0/1:6,3:9:1.58:16,0,2	0/0:17,0:14:30.09:0,30,356	0/0:15,0:11:22.31:0,22,251	0/0:21,0:18:43.87:0,44,499	0/0:17,0:15:30.09:0,30,345	0/0:15,0:11:27.06:0,27,305	0/0:33,0:30:59.53:0,60,650	0/0:6,0:5:12.79:0,13,121	1/1:5,7:8:20.87:159,21,0	0/0:17,0:15:24.07:0,24,282	0/0:27,0:23:34.31:0,34,456	0/0:14,0:12:11.77:0,12,119	0/0:16,0:14:36.11:0,36,427	0/0:26,0:21:51.15:0,51,602	0/0:10,0:10:21.06:0,21,240
chr10	10934021	.	G	GA	276.36	PASS	AB=0.889;AC=6;AF=0.115;AN=52;BaseQRankSum=7.068;DP=441;FS=0.000;HRun=3;HaplotypeScore=109.7105;InbreedingCoeff=0.5887;MQ=38.79;MQ0=30;MQRankSum=-4.691;QD=9.21;ReadPosRankSum=2.004;VQSLOD=0.9793;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:17:36.58:0,37,434	0/0:8,0:7:18.05:0,18,212	./.	./.	0/0:35,0:29:72.93:0,73,791	0/0:17,0:16:33.10:0,33,384	0/0:14,0:13:33.94:0,34,380	0/0:37,0:32:73.46:0,73,863	0/0:12,0:12:30.09:0,30,347	0/0:15,0:14:33.08:0,33,366	0/0:21,0:17:28.32:0,28,310	0/1:5,2:6:55.20:80,0,55	0/1:2,0:2:24.24:24,0,30	1/1:6,3:9:11.55:169,12,0	0/0:15,0:14:30.07:0,30,343	0/0:15,0:13:24.07:0,24,275	0/0:21,0:18:23.90:0,24,438	0/0:16,0:14:27.08:0,27,318	0/0:17,0:11:27.08:0,27,319	0/0:30,0:27:57.17:0,57,669	0/0:7,0:6:13.68:0,14,123	1/1:8,4:8:20.67:134,21,0	0/0:18,0:16:19.61:0,20,215	0/0:26,0:22:40.06:0,40,462	0/0:13,0:11:15.02:0,15,163	0/0:15,0:14:30.08:0,30,347	0/0:26,0:21:51.15:0,51,605	0/0:10,0:10:18.05:0,18,210
chr10	10934025	.	G	GA	365.94	PASS	AB=0.889;AC=6;AF=0.115;AN=52;BaseQRankSum=7.986;DP=444;FS=1.739;HRun=3;HaplotypeScore=115.6529;InbreedingCoeff=0.6073;MQ=39.04;MQ0=29;MQRankSum=-5.395;QD=10.76;ReadPosRankSum=1.159;VQSLOD=1.6294;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:17:39.12:0,39,468	0/0:8,0:7:18.05:0,18,212	./.	./.	0/0:35,0:29:72.95:0,73,816	0/0:17,0:16:30.07:0,30,352	0/0:14,0:13:33.56:0,34,386	0/0:39,0:32:70.10:0,70,828	0/0:15,0:15:34.03:0,34,382	0/0:17,0:16:42.12:0,42,477	0/0:22,0:18:30.08:0,30,342	0/1:5,2:6:53.83:86,0,54	0/1:3,0:3:26.79:42,0,27	1/1:7,3:10:23.88:190,24,0	0/0:15,0:14:30.09:0,30,356	0/0:12,0:11:27.08:0,27,316	0/0:23,0:20:42.14:0,42,464	0/0:16,0:15:27.08:0,27,313	0/0:16,0:10:27.08:0,27,321	0/0:30,0:27:57.17:0,57,670	0/0:7,0:7:18.05:0,18,200	1/1:10,4:10:26.42:182,26,0	0/0:18,0:16:23.28:0,23,251	0/0:24,0:21:41.31:0,41,491	0/0:13,0:11:12.04:0,12,142	0/0:11,0:10:30.09:0,30,351	0/0:25,0:20:51.16:0,51,609	0/0:10,0:10:21.06:0,21,242
chr10	10934029	.	G	GA	527.20	PASS	AB=0.768;AC=7;AF=0.130;AN=54;BaseQRankSum=8.101;DP=448;FS=3.862;HRun=3;HaplotypeScore=115.8558;InbreedingCoeff=0.6098;MQ=39.57;MQ0=27;MQRankSum=-6.033;QD=13.87;ReadPosRankSum=1.524;VQSLOD=2.9477;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:17:39.10:0,39,457	0/0:8,0:7:18.05:0,18,212	0/1:2,0:1:0:0,0,0	./.	0/0:36,0:30:73.64:0,74,667	0/0:16,0:15:30.08:0,30,351	0/0:13,0:12:33.10:0,33,393	0/0:42,0:34:81.23:0,81,951	0/0:15,0:15:39.12:0,39,461	0/0:17,0:16:42.12:0,42,491	0/0:23,0:19:33.10:0,33,385	0/1:3,4:6:53.78:94,0,54	0/1:2,2:4:23.89:85,0,24	1/1:2,8:10:24:222,24,0	0/0:14,0:13:33.10:0,33,384	0/0:12,0:11:27.08:0,27,320	0/0:23,0:21:45.45:0,45,503	0/0:14,0:14:31.64:0,32,353	0/0:17,0:11:33.10:0,33,389	0/0:28,0:25:57.17:0,57,674	0/0:9,0:9:21.06:0,21,243	1/1:10,5:11:29.93:260,30,0	0/0:16,0:15:24.07:0,24,281	0/0:22,0:21:40.04:0,40,492	0/0:13,0:11:17.23:0,17,95	0/0:13,0:12:30.09:0,30,353	0/0:26,0:21:51.16:0,51,610	0/0:10,0:10:21.06:0,21,246
chr10	10934030	.	AAAG	A	293.92	PASS	AB=1.000;AC=7;AF=0.135;AN=52;BaseQRankSum=9.009;DP=452;FS=4.430;HRun=0;HaplotypeScore=130.1363;InbreedingCoeff=0.5051;MQ=39.72;MQ0=27;MQRankSum=-5.778;QD=6.00;ReadPosRankSum=-0.101;VQSLOD=2.7961;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:17:39.11:0,39,641	0/0:8,0:7:17.87:0,18,322	./.	./.	0/0:36,0:30:37.87:0,38,896	0/0:17,0:16:32.76:0,33,570	0/0:12,0:11:33.11:0,33,482	0/0:42,0:34:84.27:0,84,1311	0/0:15,0:15:39.13:0,39,650	0/0:17,0:16:42.14:0,42,740	0/0:22,0:18:36.11:0,36,500	0/1:7,0:6:50.96:51,0,115	0/1:4,0:4:35.61:36,0,53	1/1:10,0:10:23.21:136,23,0	0/0:14,0:13:33.10:0,33,505	0/0:12,0:11:30.10:0,30,527	0/0:22,0:21:52.86:0,53,769	0/0:14,0:14:30.57:0,31,523	0/0:18,0:12:36.07:0,36,578	0/0:28,0:25:57.19:0,57,1080	0/0:9,0:9:24.08:0,24,355	1/1:11,4:11:29.28:198,29,0	0/0:18,0:17:22.21:0,22,351	0/0:23,0:21:43.38:0,43,612	0/1:13,0:11:12.53:13,0,32	0/0:14,0:13:36.11:0,36,540	0/0:26,0:21:54.17:0,54,909	0/0:10,0:10:21.07:0,21,327
chr10	10934033	.	G	GA	524.27	PASS	AB=0.764;AC=9;AF=0.173;AN=52;BaseQRankSum=9.704;DP=460;FS=10.137;HRun=3;HaplotypeScore=121.8308;InbreedingCoeff=0.5911;MQ=40.70;MQ0=24;MQRankSum=-6.601;QD=6.24;ReadPosRankSum=0.697;VQSLOD=-0.1702;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:17:34.04:0,34,400	0/0:8,0:7:18.05:0,18,210	./.	./.	0/1:34,0:29:85.79:86,0,459	0/0:17,0:16:30.08:0,30,351	0/0:15,0:14:37.03:0,37,409	0/0:41,0:33:76.17:0,76,893	0/0:16,0:16:39.59:0,40,463	0/0:18,0:17:45.12:0,45,518	0/0:24,0:20:39.11:0,39,457	0/1:4,4:7:51.09:70,0,51	0/1:2,3:5:21.01:65,0,21	1/1:2,8:10:23.35:149,23,0	0/0:14,0:13:29.92:0,30,334	0/0:12,0:11:30.09:0,30,351	0/0:21,0:21:53.32:0,53,598	0/0:14,0:14:32.12:0,32,351	0/0:18,0:13:35.96:0,36,389	0/0:27,0:24:57.17:0,57,670	0/0:9,0:9:24.07:0,24,279	1/1:8,6:11:29.59:194,30,0	0/0:19,0:18:24.54:0,25,284	0/0:23,0:21:35.91:0,36,461	1/1:13,0:11:17.38:115,17,0	0/0:14,0:13:39.10:0,39,441	0/0:29,0:24:60.17:0,60,699	0/0:12,0:12:24.07:0,24,274
chr10	10934037	.	G	GA	682.83	PASS	AB=0.670;AC=9;AF=0.167;AN=54;BaseQRankSum=10.213;DP=475;FS=11.667;HRun=3;HaplotypeScore=130.4377;InbreedingCoeff=0.5643;MQ=41.11;MQ0=22;MQRankSum=-7.304;QD=7.67;ReadPosRankSum=0.324;VQSLOD=-0.0477;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:16:36.11:0,36,427	0/0:8,0:7:15.05:0,15,176	0/0:3,0:1:2.97:0,3,20	./.	0/1:25,12:32:99:158,0,472	0/0:16,0:15:30.08:0,30,352	0/0:15,0:14:38.91:0,39,438	0/0:39,0:32:75.23:0,75,888	0/0:18,0:18:45.61:0,46,532	0/0:19,0:18:51.15:0,51,590	0/0:26,0:22:48.12:0,48,551	0/1:4,3:7:51.17:64,0,51	0/1:1,4:5:21.20:56,0,21	1/1:6,4:10:26.06:158,26,0	0/0:15,0:14:30.09:0,30,348	0/0:13,0:12:33.10:0,33,387	0/0:22,0:22:59.18:0,59,651	0/0:14,0:14:32.46:0,32,356	0/0:17,0:13:36.07:0,36,409	0/0:28,0:25:54.16:0,54,634	0/0:9,0:9:24.07:0,24,284	1/1:9,7:13:35.41:247,35,0	0/0:20,0:19:21.48:0,21,247	0/0:22,0:20:28.67:0,29,440	1/1:6,8:12:23.38:156,23,0	0/0:14,0:13:33.10:0,33,392	0/0:28,0:23:60.18:0,60,718	0/0:16,0:16:30.07:0,30,328
chr10	10934038	.	AAAG	A	669.31	PASS	AB=0.926;AC=9;AF=0.167;AN=54;BaseQRankSum=10.003;DP=482;FS=13.251;HRun=0;HaplotypeScore=145.2185;InbreedingCoeff=0.5691;MQ=41.14;MQ0=22;MQRankSum=-6.348;QD=7.52;ReadPosRankSum=0.452;VQSLOD=2.6133;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:16:35.90:0,36,580	0/0:9,0:8:17.86:0,18,317	0/0:4,0:1:2.50:0,2,9	./.	0/1:37,0:32:99:101,0,805	0/0:16,0:15:29.76:0,30,534	0/0:15,0:14:39.08:0,39,522	0/0:40,0:33:84.27:0,84,1305	0/0:18,0:18:48.15:0,48,719	0/0:19,0:18:51.17:0,51,849	0/0:26,0:22:48.15:0,48,650	0/1:5,2:7:67.32:67,0,112	0/1:5,0:5:50.23:53,0,50	1/1:7,3:10:25.99:164,26,0	0/0:15,0:14:30.09:0,30,467	0/0:13,0:12:33.11:0,33,568	0/0:23,0:23:63.15:0,63,898	0/0:14,0:14:32.14:0,32,523	0/0:18,0:13:36.12:0,36,598	0/0:28,0:25:54.18:0,54,1043	0/0:9,0:9:24.08:0,24,359	1/1:12,4:13:35.69:295,36,0	0/0:20,0:19:18.69:0,19,311	0/0:23,0:21:38.48:0,38,563	1/1:14,0:12:22.85:146,23,0	0/0:14,0:13:33.11:0,33,534	0/0:28,0:23:60.20:0,60,986	0/0:17,0:17:39.10:0,39,514
chr10	10934041	.	G	GA	825.69	PASS	AB=0.659;AC=9;AF=0.167;AN=54;BaseQRankSum=9.790;DP=492;FS=16.660;HRun=3;HaplotypeScore=131.4188;InbreedingCoeff=0.5670;MQ=44.72;MQ0=21;MQRankSum=-7.124;QD=8.97;ReadPosRankSum=1.213;VQSLOD=0.2697;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:15:35.83:0,36,369	0/0:9,0:8:18.05:0,18,208	0/0:7,0:2:2.49:0,2,9	./.	0/1:24,15:34:99:164,0,428	0/0:16,0:15:30.08:0,30,347	0/0:16,0:15:36.57:0,37,415	0/0:39,0:32:84.25:0,84,989	0/0:19,0:19:47.96:0,48,509	0/0:21,0:20:54.15:0,54,627	0/0:25,0:23:51.15:0,51,602	0/1:4,3:7:51.06:92,0,51	0/1:1,4:5:21.11:66,0,21	1/1:5,5:10:26.92:232,27,0	0/0:15,0:14:30.09:0,30,345	0/0:14,0:13:33.10:0,33,392	0/0:23,0:23:62.74:0,63,717	0/0:15,0:15:30.55:0,31,346	0/0:18,0:13:39.10:0,39,453	0/0:28,0:25:60.16:0,60,694	0/0:9,0:9:24.07:0,24,284	1/1:8,8:13:35.41:249,35,0	0/0:20,0:19:12.41:0,12,132	0/0:23,0:21:32.05:0,32,387	1/1:5,10:13:25.79:179,26,0	0/0:14,0:13:33.05:0,33,376	0/0:28,0:23:57.17:0,57,682	0/0:16,0:16:36.10:0,36,409
chr10	10934045	.	G	GA	872.42	PASS	AB=0.766;AC=10;AF=0.179;AN=56;BaseQRankSum=9.914;DP=505;FS=8.913;HRun=3;HaplotypeScore=134.5519;InbreedingCoeff=0.4627;MQ=47.93;MQ0=19;MQRankSum=-7.576;QD=7.52;ReadPosRankSum=2.994;VQSLOD=0.3422;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:18,0:16:10.31:10,0,28	0/0:8,0:7:18.05:0,18,212	0/0:11,0:4:9.01:0,9,97	0/0:10,0:4:0.94:0,1,19	0/1:27,16:38:99:202,0,293	0/0:16,0:15:21.22:0,21,176	0/0:16,0:15:22.46:0,22,162	0/0:39,0:33:81.24:0,81,952	0/0:20,0:20:10.71:0,11,88	0/0:22,0:21:60.16:0,60,690	0/0:24,0:22:48.15:0,48,572	0/1:4,3:7:51.06:89,0,51	0/1:3,4:7:17.44:94,0,17	1/1:3,6:9:26.73:213,27,0	0/0:14,0:13:33.10:0,33,387	0/0:14,0:13:36.11:0,36,423	0/0:23,0:23:57.17:0,57,676	0/0:15,0:15:30.55:0,31,341	0/0:20,0:14:42.06:0,42,460	0/0:28,0:25:60.18:0,60,709	0/0:10,0:10:24.07:0,24,275	1/1:9,7:13:35.21:247,35,0	0/0:18,0:17:10.65:0,11,99	0/0:24,0:22:35.92:0,36,410	1/1:5,11:14:26.02:177,26,0	0/0:14,0:13:39.11:0,39,456	0/0:27,0:22:51.15:0,51,607	0/0:16,0:16:39.12:0,39,456
chr10	10934046	.	AAAG	A	2606.11	PASS	AB=0.956;AC=15;AF=0.268;AN=56;BaseQRankSum=1.807;DP=509;FS=0.423;HRun=0;HaplotypeScore=144.1327;InbreedingCoeff=0.3583;MQ=47.92;MQ0=18;MQRankSum=-1.174;QD=14.56;ReadPosRankSum=1.221;VQSLOD=3.3461;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:16:14.40:273,14,0	0/0:8,0:7:17.86:0,18,279	0/0:11,0:4:10.98:0,11,85	0/1:10,0:4:9.63:10,0,15	0/1:37,5:37:99:282,0,478	0/1:16,0:15:99:116,0,195	0/1:16,0:15:99:407,0,124	0/0:38,0:32:86.97:0,87,1129	0/1:20,0:20:11.07:448,0,11	0/0:22,0:21:60.17:0,60,872	0/0:24,0:22:48.13:0,48,583	0/1:6,2:8:99:163,0,99	0/1:7,0:7:14.56:160,0,15	1/1:6,3:9:27:279,27,0	0/0:14,0:13:33.09:0,33,457	0/0:14,0:13:36.11:0,36,553	0/0:23,0:23:57.13:0,57,742	0/0:15,0:15:13.93:0,14,419	0/0:21,0:15:44.11:0,44,565	0/0:28,0:26:63.09:0,63,1014	0/0:11,0:11:29.95:0,30,363	1/1:11,5:13:36.09:409,36,0	0/0:18,0:17:5.87:0,6,144	0/0:25,0:22:37.11:0,37,486	1/1:16,0:14:29.39:240,29,0	0/0:15,0:14:42.09:0,42,584	0/0:27,0:22:51.15:0,51,769	0/0:16,0:16:39.08:0,39,453
chr10	10934049	.	G	GA	3558.64	PASS	AB=0.722;AC=17;AF=0.304;AN=56;BaseQRankSum=-0.536;DP=533;FS=0.409;HRun=3;HaplotypeScore=134.1342;InbreedingCoeff=0.4259;MQ=49.50;MQ0=19;MQRankSum=-2.987;QD=17.53;ReadPosRankSum=2.520;VQSLOD=3.3052;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,14:17:36.12:498,36,0	0/0:9,0:8:20.99:0,21,196	0/0:17,0:6:10.73:0,11,83	0/1:12,0:5:3.85:4,0,15	0/1:24,17:36:99:420,0,147	0/1:7,9:15:66.43:221,0,66	0/1:5,12:16:47.43:401,0,47	0/0:38,0:32:78.79:0,79,685	1/1:4,16:20:22.50:629,23,0	0/0:24,0:23:62.97:0,63,602	0/0:26,0:24:46.89:0,47,443	0/1:5,3:8:44.23:167,0,44	0/1:2,6:8:8.58:189,0,9	1/1:4,6:10:30.07:323,30,0	0/0:15,0:14:33.03:0,33,310	0/0:16,0:15:36.01:0,36,356	0/0:23,0:23:59.90:0,60,552	0/1:16,1:17:8.92:9,0,252	0/0:22,0:16:29.07:0,29,331	0/0:28,0:26:62.58:0,63,584	0/0:12,0:12:30.51:0,31,289	1/1:10,7:14:39.05:391,39,0	0/0:18,0:17:4.53:0,5,61	0/0:22,0:19:36.42:0,36,339	1/1:5,11:14:32.95:308,33,0	0/0:16,0:15:42.07:0,42,412	0/0:25,0:20:47.87:0,48,457	0/0:18,0:18:45.02:0,45,409
chr10	10934053	.	GA	G	7452.90	PASS	AB=0.797;AC=33;AF=0.589;AN=56;BaseQRankSum=-8.366;DP=539;FS=1.777;HRun=4;HaplotypeScore=120.4396;InbreedingCoeff=0.7288;MQ=54.49;MQ0=13;MQRankSum=3.065;QD=19.51;ReadPosRankSum=-0.305;VQSLOD=3.6230;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:16:36.10:0,36,426	1/1:0,9:8:21.04:242,21,0	0/0:23,0:10:19.67:0,20,242	0/0:17,1:8:5.40:0,5,39	0/1:42,1:38:87.38:87,0,673	0/1:13,2:14:13.62:14,0,234	0/0:18,1:18:12.52:0,13,452	1/1:16,22:32:47.26:642,47,0	0/0:18,2:20:15.66:0,16,531	1/1:0,23:23:66.07:751,66,0	1/1:1,23:22:50.74:575,51,0	0/0:8,0:8:16.66:0,17,210	0/0:8,0:8:21.05:0,21,253	0/0:10,0:10:30.05:0,30,316	1/1:0,14:13:33.10:390,33,0	1/1:0,16:15:36.11:428,36,0	1/1:2,21:23:54.60:630,55,0	0/1:2,15:17:32.57:311,0,33	1/1:9,12:17:4.14:385,4,0	1/1:5,23:27:50.98:566,51,0	1/1:1,12:13:33.57:391,34,0	0/0:16,0:15:42.07:0,42,457	1/1:17,1:17:10.21:101,10,0	1/1:2,19:18:35.85:426,36,0	0/0:14,2:14:33.05:0,33,383	1/1:1,16:16:28.17:516,28,0	1/1:5,19:20:42.09:483,42,0	1/1:1,17:18:45.12:518,45,0
chr10	10934054	.	A	AAAG	9366.92	PASS	AB=0.910;AC=33;AF=0.589;AN=56;BaseQRankSum=-9.950;DP=551;FS=1.277;HRun=0;HaplotypeScore=137.8295;InbreedingCoeff=0.4930;MQ=57.74;MQ0=13;MQRankSum=2.448;QD=21.89;ReadPosRankSum=-0.540;VQSLOD=4.8080;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:16,1:16:35.73:0,36,376	1/1:9,0:8:21.01:337,21,0	0/0:27,0:13:26.36:0,26,275	0/1:20,0:9:1.35:1,0,32	0/1:34,7:38:99:234,0,604	0/1:15,0:14:42.85:43,0,189	0/1:19,0:19:64.33:64,0,442	1/1:38,0:32:0.19:738,0,0	0/0:20,0:20:12.82:0,13,444	1/1:23,0:23:66.19:929,66,0	1/1:24,0:22:50.82:601,51,0	0/0:8,0:8:13.60:0,14,207	0/0:7,0:7:20.98:0,21,237	0/0:10,0:10:29.98:0,30,304	1/1:14,0:13:33.11:485,33,0	1/1:16,0:15:36.12:563,36,0	1/1:24,0:24:57.14:786,57,0	0/1:18,0:18:42.09:370,0,42	0/1:22,0:18:15.22:540,0,15	1/1:28,0:27:52.41:781,52,0	1/1:13,0:13:36.11:461,36,0	0/0:16,0:15:42.01:0,42,489	0/1:3,16:19:4.82:154,0,5	1/1:21,0:18:36.11:492,36,0	0/0:16,1:15:32.98:0,33,364	1/1:19,0:18:17.50:598,17,0	1/1:23,1:19:42.13:583,42,0	1/1:18,0:18:45.14:607,45,0
chr10	10934295	.	T	TCA	24799.71	PASS	AB=1.000;AC=53;AF=0.946;AN=56;BaseQRankSum=-4.282;DP=1409;FS=9.120;HRun=0;HaplotypeScore=207.0119;InbreedingCoeff=0.4300;MQ=47.94;MQ0=56;MQRankSum=3.511;QD=18.60;ReadPosRankSum=4.300;VQSLOD=3.7190;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,29:42:22.77:586,23,0	1/1:1,18:18:18.06:293,18,0	0/1:60,0:6:11.98:12,0,33	0/0:76,0:10:12.42:0,12,145	1/1:10,9:14:2.95:51,3,0	1/1:5,22:27:33.09:532,33,0	1/1:6,36:41:39.13:661,39,0	1/1:26,64:83:99:2467,165,0	1/1:8,25:33:36.12:589,36,0	1/1:11,56:65:99:1944,131,0	1/1:4,28:33:14.71:233,15,0	1/1:3,39:42:39.13:662,39,0	1/1:9,40:48:60.17:1016,60,0	1/1:9,38:47:63.21:1065,63,0	1/1:8,64:73:96.17:1626,96,0	1/1:4,59:63:66.67:1122,67,0	1/1:5,53:58:84.28:1426,84,0	1/1:1,26:29:21.07:335,21,0	1/1:16,27:39:57.16:1134,57,0	1/1:14,13:27:51.11:803,51,0	1/1:18,174:186:99:3146,186,0	1/1:5,20:26:3.22:97,3,0	1/1:5,18:22:24.08:402,24,0	1/1:9,64:70:72.25:1209,72,0	1/1:21,4:25:5.90:288,6,0	1/1:15,51:64:99:1980,128,0	1/1:6,23:30:3.39:617,3,0	1/1:2,15:19:32.14:504,32,0
chr10	10934342	.	CCA	C	181.78	PASS	AB=0.806;AC=4;AF=0.071;AN=56;BaseQRankSum=7.438;DP=1632;FS=38.162;HRun=0;HaplotypeScore=422.0539;InbreedingCoeff=0.7117;MQ=48.53;MQ0=33;MQRankSum=-5.093;QD=2.93;ReadPosRankSum=-3.310;VQSLOD=0.9361;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:45.64:0,46,710	0/1:14,0:13:1.22:1,0,231	0/0:77,0:17:23.15:0,23,429	0/0:82,0:20:26.27:0,26,348	0/1:8,14:19:0.33:0,0,0	0/0:22,0:21:22.35:0,22,403	0/0:50,0:49:54.09:0,54,861	0/0:100,0:89:99:0,198,3039	0/0:33,0:33:33.15:0,33,523	0/0:74,0:72:99:0,135,2350	0/0:28,0:28:29.87:0,30,451	0/0:43,0:43:49.50:0,49,753	0/0:46,0:46:49.74:0,50,853	0/0:50,0:50:39.10:0,39,633	0/0:92,0:92:99:0,120,1816	0/0:79,0:79:99:0,116,1771	0/0:78,0:78:99:0,153,2387	0/0:35,0:34:63.17:0,63,947	0/0:64,0:54:99:0,117,1783	0/0:34,0:34:56.69:0,57,869	0/0:244,0:241:99:0,303,4707	0/0:35,0:35:14.22:0,14,254	0/0:28,0:28:39.07:0,39,579	0/0:100,0:99:99:0,126,1953	1/1:14,12:26:25.17:275,25,0	0/0:81,1:81:99:0,138,2667	0/0:31,0:31:54.12:0,54,813	0/0:18,0:18:39.10:0,39,596
chr10	10934353	.	CAG	C	105.67	PASS	AB=0.984;AC=6;AF=0.107;AN=56;BaseQRankSum=9.848;DP=1615;FS=17.012;HRun=0;HaplotypeScore=420.8023;InbreedingCoeff=0.2161;MQ=48.49;MQ0=32;MQRankSum=-7.057;QD=0.70;ReadPosRankSum=-2.906;VQSLOD=0.5293;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:35:25.94:0,26,704	0/1:14,1:14:13.25:13,0,275	0/0:74,0:17:32.94:0,33,453	0/0:83,0:20:38.60:0,39,425	0/0:34,0:31:18.56:0,19,133	0/1:24,0:22:1.88:2,0,368	0/0:48,0:47:63.93:0,64,1186	0/0:100,0:85:99:0,204,3506	0/0:32,0:32:1.47:0,1,644	0/0:75,1:74:99:0,110,2681	0/0:32,0:32:38.71:0,39,572	0/0:40,0:40:39.22:0,39,836	0/1:48,0:48:57.71:58,0,936	0/0:53,0:53:8.04:0,8,778	0/0:92,0:92:99:0,125,2040	0/0:79,0:79:99:0,128,2040	0/0:78,0:78:99:0,155,2521	0/0:36,1:36:53.58:0,54,897	0/0:57,0:49:99:0,126,1933	0/0:33,0:32:52:0,52,1018	0/0:226,0:222:99:0,320,5168	0/1:40,0:40:5.65:6,0,311	0/0:31,0:30:50.92:0,51,695	0/0:97,0:94:99:0,104,2119	1/1:22,1:23:7.79:137,8,0	0/0:79,1:79:99:0,174,3205	0/0:29,0:29:56.13:0,56,921	0/0:17,0:17:42.03:0,42,683
chr10	10934370	.	TAC	T	3203.31	PASS	AB=0.871;AC=8;AF=0.143;AN=56;BaseQRankSum=4.060;DP=1505;FS=17.952;HRun=0;HaplotypeScore=416.0445;InbreedingCoeff=-0.1640;MQ=46.44;MQ0=26;MQRankSum=-1.502;QD=5.47;ReadPosRankSum=-0.873;VQSLOD=1.4246;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:40:69.07:0,69,1133	0/0:12,0:12:23.61:0,24,322	0/1:63,1:15:14.66:15,0,199	0/1:71,1:23:6.99:7,0,449	0/0:33,4:37:31.29:0,31,522	0/0:21,0:19:24.79:0,25,327	0/0:49,0:49:78.13:0,78,1296	0/1:65,12:63:99:486,0,1035	0/0:36,1:37:15.61:0,16,982	0/0:78,2:78:21.09:0,21,2427	0/0:27,0:27:38.50:0,38,596	0/0:37,0:37:51.05:0,51,813	0/1:51,2:53:46.52:47,0,1328	0/1:54,2:56:61.11:61,0,1178	0/0:95,0:95:99:0,100,1603	0/0:69,0:69:96.10:0,96,1677	0/0:66,0:66:99:0,106,1988	0/0:34,0:33:54.18:0,54,882	0/1:31,6:29:99:148,0,388	0/1:18,20:37:22.23:456,0,22	0/1:107,80:182:99:2117,0,375	0/0:48,6:53:42.69:0,43,756	0/0:23,2:25:9.43:0,9,694	0/0:93,0:91:99:0,102,1681	0/0:26,0:26:20.48:0,20,299	0/0:72,3:74:42.58:0,43,2133	0/0:26,0:26:45.01:0,45,660	0/0:13,0:13:32.08:0,32,459
chr10	10934416	.	CAG	C	549.68	PASS	AB=0.894;AC=8;AF=0.143;AN=56;BaseQRankSum=12.313;DP=1272;FS=31.408;HRun=0;HaplotypeScore=417.8005;InbreedingCoeff=-0.1758;MQ=41.11;MQ0=34;MQRankSum=-8.239;QD=1.60;ReadPosRankSum=-2.362;VQSLOD=0.5626;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,2:28:33.38:0,33,767	0/1:17,3:19:87.96:88,0,364	0/0:91,0:16:34.58:0,35,456	0/0:99,0:23:31.57:0,32,413	0/0:20,3:23:23.69:0,24,403	0/0:21,4:23:13.51:0,14,414	0/0:52,1:53:25.80:0,26,1103	0/0:67,0:51:99:0,104,1744	0/0:42,0:41:27.13:0,27,920	0/1:62,7:67:99:154,0,1484	0/0:18,1:19:20.21:0,20,316	0/0:44,0:42:12.73:0,13,769	0/1:45,6:51:99:140,0,1208	0/0:46,3:49:31.86:0,32,1064	0/0:64,2:66:57.05:0,57,964	0/1:51,3:54:46.41:46,0,1028	0/0:36,2:38:6.31:0,6,1317	0/0:20,0:19:30.21:0,30,765	0/0:32,1:25:36.28:0,36,698	0/0:29,1:30:29.29:0,29,468	0/0:104,0:107:99:0,137,2207	0/1:34,17:50:21.15:21,0,597	0/0:19,0:20:10.87:0,11,472	0/0:63,1:60:89.47:0,89,1285	0/1:24,3:28:20.85:21,0,362	0/1:48,4:50:99:164,0,880	0/1:18,1:19:50.64:51,0,243	0/0:9,0:9:20.40:0,20,259
chr10	10934446	.	CCA	C	613.38	PASS	AB=0.841;AC=18;AF=0.321;AN=56;BaseQRankSum=-4.265;DP=845;FS=0.939;HRun=0;HaplotypeScore=287.2592;InbreedingCoeff=0.4372;MQ=39.27;MQ0=17;MQRankSum=2.957;QD=1.95;ReadPosRankSum=-1.304;VQSLOD=2.0519;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:13,4:21:3.16:58,3,0	0/0:17,0:18:3.90:0,4,22	0/0:43,0:7:3.01:0,3,40	0/0:46,1:11:13.41:0,13,116	1/1:12,0:13:5.66:48,6,0	0/0:14,5:22:1.36:0,1,5	0/1:24,12:36:2.67:162,0,3	0/0:36,0:27:27.07:0,27,180	1/1:20,11:32:1.49:40,1,0	0/0:57,0:59:32.84:0,33,191	1/1:19,0:20:0.40:1,0,0	0/1:27,7:34:7.62:139,0,8	0/1:30,12:43:3.19:117,0,3	1/1:26,12:38:11.57:129,12,0	0/0:42,0:49:21.64:0,22,119	0/0:36,0:41:21.76:0,22,102	0/0:20,0:21:19.47:0,19,95	0/0:12,0:11:14.60:0,15,87	0/0:18,0:18:6.68:0,7,44	0/0:20,0:21:0:0,0,2	0/0:53,0:56:18.81:0,19,136	1/1:22,6:36:4.15:47,4,0	0/1:15,0:16:1.42:1,0,18	0/0:30,0:32:5.64:0,6,28	1/1:17,1:24:1.18:18,1,0	0/0:28,0:29:31.33:0,31,177	0/0:16,0:17:14.22:0,14,115	0/0:2,0:3:2.99:0,3,23
chr10	10934454	.	A	ACT	401.55	PASS	AB=0.963;AC=11;AF=0.196;AN=56;BaseQRankSum=7.341;DP=727;FS=14.638;HRun=0;HaplotypeScore=278.8277;InbreedingCoeff=-0.1399;MQ=37.36;MQ0=13;MQRankSum=-4.921;QD=1.50;ReadPosRankSum=-2.498;VQSLOD=0.6014;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:11.34:0,11,85	0/0:12,1:13:0.22:0,0,16	0/1:30,0:2:0.85:1,0,16	0/0:30,0:8:2.91:0,3,67	0/0:13,0:13:4.58:0,5,82	0/0:17,0:17:3.03:0,3,21	0/1:34,0:34:6.96:7,0,166	0/0:26,0:17:44:0,44,491	0/0:30,1:31:10.67:0,11,93	0/1:50,1:50:99:100,0,549	0/0:17,1:18:3.36:0,3,87	0/1:33,1:33:16.93:17,0,168	0/1:37,4:41:69.13:69,0,197	0/0:35,2:37:16.41:0,16,138	0/0:46,1:47:36.42:0,36,331	0/0:34,2:36:30.29:0,30,272	0/0:18,0:18:6.71:0,7,242	0/0:12,0:11:20.36:0,20,178	0/1:12,0:12:16.41:16,0,121	1/1:15,1:17:5.77:15,6,0	0/0:50,0:49:27.82:0,28,352	0/0:28,1:29:7.86:0,8,93	0/0:12,3:15:1.64:0,2,162	0/0:31,0:31:17.85:0,18,174	0/0:16,0:16:1.47:0,1,18	0/1:27,1:26:99:114,0,313	0/1:13,3:16:99:188,0,153	0/1:4,0:4:6.43:6,0,20
chr10	10934465	.	C	CAG	1773.64	PASS	AB=0.965;AC=27;AF=0.675;AN=40;BaseQRankSum=-2.465;DP=376;FS=0.000;HRun=0;HaplotypeScore=148.9729;InbreedingCoeff=0.1601;MQ=34.85;MQ0=4;MQRankSum=0.184;QD=5.89;ReadPosRankSum=0.774;VQSLOD=3.3206;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	1/1:8,0:8:6.02:106,6,0	1/1:8,0:2:2.22:7,2,0	0/0:12,0:4:5.75:0,6,50	./.	./.	0/1:21,0:21:0.21:14,0,0	./.	0/1:20,0:20:0.01:0,0,0	0/1:17,4:20:0.67:98,0,1	./.	0/1:22,0:21:4.88:55,0,5	0/1:22,0:22:0:1,0,0	0/1:30,0:30:6.67:7,0,7	1/1:21,9:30:26.76:388,27,0	1/1:16,5:21:22.81:347,23,0	1/1:7,5:12:4.86:177,5,0	1/1:5,2:7:8.94:108,9,0	0/0:2,0:2:0.47:0,0,1	./.	./.	0/1:17,0:17:0:0,0,0	1/1:6,2:8:6.02:99,6,0	1/1:15,10:25:8.58:112,9,0	./.	1/1:10,5:14:3.42:205,3,0	0/1:9,2:11:5.35:132,0,5	0/1:3,0:3:2.16:17,0,2
chr10	10949136	.	AAGATACTT	A	4297.55	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=9.631;DP=616;FS=5.011;HRun=0;HaplotypeScore=156.5601;InbreedingCoeff=0.9856;MQ=60.41;MQ0=2;MQRankSum=-9.955;QD=53.06;ReadPosRankSum=-3.102;VQSLOD=3.8452;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,126,5416	0/0:4,0:4:12.04:0,12,530	0/0:25,0:19:53.40:0,53,1883	0/0:44,0:36:99:0,102,3870	0/0:14,0:14:42.14:0,42,1734	0/0:23,0:23:69.24:0,69,2962	0/0:24,0:24:66.21:0,66,2723	1/1:8,20:28:60.19:1597,60,0	0/0:17,0:17:51.18:0,51,2161	0/0:17,0:17:48.16:0,48,2045	0/0:13,0:13:33.11:0,33,1384	0/0:22,0:22:66.23:0,66,2890	0/0:23,0:23:66.23:0,66,2897	0/0:22,0:22:66.23:0,66,2893	0/0:28,0:28:81.26:0,81,3390	0/0:33,0:33:96.33:0,96,4046	0/0:30,0:30:87.30:0,87,3679	0/0:34,0:34:93.32:0,93,3782	1/1:7,18:25:54.16:1372,54,0	1/1:0,6:6:15.05:396,15,0	1/1:5,17:22:39.13:932,39,0	0/0:11,0:11:30.10:0,30,1238	0/0:11,0:11:33.11:0,33,1402	0/0:27,0:27:81.28:0,81,3479	0/0:9,0:9:24.08:0,24,1010	0/0:29,0:29:87.30:0,87,3685	0/0:18,0:18:48.16:0,48,2029	0/0:8,0:8:24.08:0,24,1064
chr10	10949310	.	CCCACCACCACCA	C	3086.20	PASS	AC=22;AF=0.423;AN=52;BaseQRankSum=5.137;DP=325;FS=10.121;HRun=0;HaplotypeScore=98.8207;InbreedingCoeff=0.5328;MQ=63.33;MQ0=23;MQRankSum=-1.400;QD=22.69;ReadPosRankSum=3.206;VQSLOD=1.5148;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:18.03:0,18,445	1/1:5,0:5:3.01:103,3,0	./.	0/0:32,0:23:0:0,0,0	0/0:3,0:3:0.47:0,0,1	0/0:10,0:8:9.03:0,9,426	0/0:5,0:5:3.01:0,3,152	0/0:16,0:14:0.94:0,1,3	0/0:9,0:8:9.01:0,9,238	1/1:18,1:19:1.82:101,2,0	1/1:5,2:7:6.02:72,6,0	0/0:10,0:9:7.58:0,8,206	0/0:8,0:6:3.01:0,3,128	0/0:9,0:9:3.01:0,3,174	1/1:9,5:14:8.86:310,9,0	1/1:13,15:28:36.12:1230,36,0	1/1:11,5:16:9.03:304,9,0	1/1:3,4:7:6.02:207,6,0	0/0:7,0:5:6.01:0,6,144	0/0:8,0:6:3.01:0,3,130	0/0:16,0:14:6.02:0,6,141	0/0:8,0:8:0.47:0,0,1	./.	1/1:6,5:10:3.01:103,3,0	0/0:5,0:4:3.01:0,3,92	1/1:9,7:15:18.06:503,18,0	1/1:6,4:10:2.32:102,2,0	1/1:1,2:3:6.02:207,6,0
chr10	10949818	.	A	AG	1174.07	PASS	AB=0.607;AC=11;AF=0.196;AN=56;BaseQRankSum=2.318;DP=511;FS=0.000;HRun=0;HaplotypeScore=86.3241;InbreedingCoeff=0.8548;MQ=80.94;MQ0=0;MQRankSum=0.715;QD=13.19;ReadPosRankSum=0.739;VQSLOD=4.6453;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:75.21:0,75,987	0/0:7,0:7:12.46:0,12,61	0/0:32,0:29:55.69:0,56,653	0/0:25,0:23:15.51:0,16,544	1/1:3,17:20:41.40:484,41,0	0/0:19,0:19:54.16:0,54,724	0/0:18,0:18:54.17:0,54,728	0/0:17,0:17:50.95:0,51,562	0/0:18,0:18:54.15:0,54,731	0/0:20,0:20:39.85:0,40,325	0/0:18,0:18:25.95:0,26,214	0/1:6,11:17:1.44:163,0,1	1/1:8,6:15:6.80:227,7,0	1/1:4,9:13:7.55:227,8,0	0/0:25,0:25:53.70:0,54,361	0/0:18,0:18:41.59:0,42,326	0/0:30,0:30:74:0,74,449	0/0:16,0:16:44.45:0,44,355	0/0:12,0:13:29.14:0,29,345	0/0:11,0:11:23.90:0,24,231	0/0:8,0:8:16.27:0,16,149	1/1:3,4:7:5.33:65,5,0	0/0:16,0:16:38.05:0,38,286	0/0:18,0:18:41.01:0,41,291	1/1:2,15:17:14.36:168,14,0	0/0:16,0:16:38.76:0,39,305	0/0:31,0:31:68.49:0,68,433	0/0:21,0:21:50.74:0,51,331
chr10	10949819	.	A	AGG	2898.89	PASS	AB=0.548;AC=43;AF=0.768;AN=56;BaseQRankSum=5.873;DP=518;FS=13.717;HRun=8;HaplotypeScore=95.1621;InbreedingCoeff=0.7712;MQ=80.55;MQ0=0;MQRankSum=-4.789;QD=7.61;ReadPosRankSum=4.446;VQSLOD=-0.1029;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:48.09:0,48,525	1/1:0,0:7:15.35:58,15,0	0/0:32,0:29:44.70:0,45,540	0/0:25,0:23:51.89:0,52,474	1/1:19,1:20:45.01:437,45,0	0/0:19,0:19:51.14:0,51,567	0/0:18,0:18:45.07:0,45,487	1/1:17,1:19:6.02:74,6,0	0/0:18,0:18:45.10:0,45,501	1/1:1,0:20:44.32:169,44,0	1/1:1,0:19:28.49:105,28,0	1/1:16,0:16:2.30:132,2,0	1/1:14,0:14:10.90:194,11,0	1/1:14,0:14:9.90:255,10,0	1/1:3,0:27:42.42:146,42,0	1/1:3,0:18:27.96:117,28,0	1/1:1,0:30:62.38:215,62,0	1/1:5,0:16:22.14:77,22,0	1/1:12,1:17:24.03:258,24,0	1/1:8,0:12:3.01:42,3,0	1/1:5,1:10:3:29,3,0	1/1:6,0:6:6.01:56,6,0	0/1:3,0:17:5.30:68,0,5	1/1:2,0:17:27.32:94,27,0	1/1:14,0:14:14.99:138,15,0	1/1:4,0:17:30.33:121,30,0	1/1:6,0:32:50.54:174,51,0	1/1:3,0:19:37.43:129,37,0
chr10	10950003	.	A	ATGTTCTC	12995.72	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=-4.902;DP=461;FS=5.091;HRun=0;HaplotypeScore=110.2930;InbreedingCoeff=0.9375;MQ=81.48;MQ0=0;MQRankSum=-13.339;QD=52.83;ReadPosRankSum=-2.960;VQSLOD=4.1308;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:87.30:0,87,2114	1/1:2,2:4:9.03:288,9,0	0/0:18,0:18:33.08:0,33,653	0/0:21,0:21:45.27:0,45,1107	0/0:21,0:21:45.15:0,45,1092	0/0:13,0:13:33.11:0,33,818	0/0:22,0:22:60.21:0,60,1459	1/1:20,14:37:69.22:2322,69,0	0/0:22,0:22:54.17:0,54,1230	1/1:5,7:11:21.07:722,21,0	1/1:9,2:11:12.02:229,12,0	0/0:16,0:16:42.14:0,42,1022	0/0:16,0:16:33.11:0,33,817	0/0:19,0:19:48.15:0,48,1083	1/1:5,10:15:27.09:961,27,0	1/1:4,9:13:24.08:928,24,0	1/1:9,10:21:0.86:947,1,0	1/1:5,7:12:18.06:618,18,0	1/1:12,11:25:45.10:1508,45,0	1/1:6,16:20:42.14:984,42,0	1/1:7,11:18:27.09:586,27,0	0/0:4,0:4:12.04:0,12,297	1/1:1,3:5:12.04:162,12,0	1/1:7,8:15:15.05:433,15,0	0/0:12,0:12:33.11:0,33,818	1/1:7,8:15:30.09:920,30,0	1/1:2,12:15:30.10:922,30,0	1/1:2,4:6:12.04:465,12,0
chr10	10952369	.	GA	G	14227.18	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=0.981;DP=547;FS=22.003;HRun=6;HaplotypeScore=61.3253;InbreedingCoeff=0.9674;MQ=76.70;MQ0=0;MQRankSum=-9.027;QD=27.90;ReadPosRankSum=5.649;VQSLOD=3.0639;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,19:20:42.11:451,42,0	1/1:0,7:7:21.05:226,21,0	0/0:23,0:23:57.18:0,57,731	0/0:14,0:14:30.03:0,30,350	1/1:1,24:25:72.18:774,72,0	1/1:3,17:20:51.13:548,51,0	1/1:1,17:18:45.11:484,45,0	1/1:3,35:38:99:1086,102,0	1/1:3,16:19:45.11:483,45,0	1/1:0,27:27:81.16:845,81,0	1/1:3,17:20:51.12:546,51,0	1/1:0,18:18:48.12:516,48,0	1/1:1,16:17:48.12:516,48,0	1/1:0,20:20:57.14:612,57,0	1/1:0,14:14:39.10:419,39,0	1/1:3,19:22:54.13:580,54,0	1/1:3,18:21:54.13:578,54,0	1/1:1,19:20:48.12:514,48,0	1/1:0,21:21:63.16:677,63,0	1/1:1,23:24:66.16:707,66,0	1/1:0,4:4:9.02:97,9,0	1/1:2,24:26:72.16:765,72,0	1/1:2,22:24:56.88:612,57,0	1/1:2,14:16:36.09:387,36,0	1/1:1,15:16:45.11:483,45,0	1/1:3,17:20:48.12:516,48,0	1/1:1,23:24:51.13:548,51,0	1/1:1,8:9:24.06:258,24,0
chr10	10952442	.	C	CA	4240.76	PASS	AB=0.787;AC=36;AF=0.643;AN=56;BaseQRankSum=-5.295;DP=493;FS=8.258;HRun=14;HaplotypeScore=87.9587;InbreedingCoeff=0.5456;MQ=59.83;MQ0=2;MQRankSum=-1.376;QD=11.28;ReadPosRankSum=-2.425;VQSLOD=3.3551;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:11:15.21:100,15,0	0/1:1,4:5:4.27:90,0,4	0/0:11,0:5:8.11:0,8,45	0/1:11,0:8:0.01:0,0,0	0/0:18,0:31:54.09:0,54,183	1/1:13,0:13:9.10:52,9,0	1/1:10,0:13:23.65:137,24,0	1/1:11,22:35:46.21:467,46,0	1/1:24,0:24:28.38:154,28,0	0/1:23,7:30:8.39:277,0,8	1/1:19,11:31:60.51:451,61,0	0/0:5,0:10:9.38:0,9,27	0/0:4,0:17:26.79:0,27,78	0/0:3,0:12:18.30:0,18,53	1/1:7,7:15:13.57:229,14,0	1/1:9,5:14:29.89:246,30,0	1/1:7,8:15:27.88:239,28,0	1/1:11,14:25:32.81:386,33,0	0/1:18,3:22:24.30:170,0,24	1/1:22,4:29:7.81:330,8,0	1/1:2,0:2:5.99:47,6,0	0/0:8,0:19:26.57:0,27,77	1/1:10,4:14:7.58:144,8,0	0/1:5,4:9:20.23:88,0,20	0/0:9,0:17:26.60:0,27,82	0/1:17,5:22:11.36:236,0,11	1/1:12,7:19:13.72:215,14,0	1/1:3,11:16:23.66:182,24,0
chr10	10952801	.	ATTCT	A	3410.60	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=11.661;DP=598;FS=7.021;HRun=0;HaplotypeScore=93.7643;InbreedingCoeff=0.9993;MQ=70.22;MQ0=0;MQRankSum=-1.933;QD=38.32;ReadPosRankSum=0.460;VQSLOD=3.6139;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:87.28:0,87,2074	0/0:12,0:12:33.11:0,33,833	0/0:13,0:12:30.07:0,30,551	0/0:13,0:13:28.36:0,28,613	0/0:34,1:34:34.92:0,35,1990	0/0:19,0:19:54.19:0,54,1379	0/0:17,0:17:48.16:0,48,1197	1/1:2,18:19:51.12:799,51,0	0/0:19,0:19:54.18:0,54,1312	0/0:34,0:34:84.07:0,84,1985	0/0:27,0:27:75.24:0,75,1809	0/0:22,0:22:54.18:0,54,1328	0/0:29,0:29:75.24:0,75,1857	0/0:24,0:24:66.21:0,66,1593	0/0:24,0:24:63.20:0,63,1554	0/0:19,0:19:48.14:0,48,1099	0/0:12,0:12:30.09:0,30,647	0/0:25,0:25:63.21:0,63,1542	1/1:2,18:20:54.16:950,54,0	1/1:3,23:26:60.13:985,60,0	1/1:2,21:23:42.06:677,42,0	0/0:11,0:11:33.09:0,33,702	0/0:14,0:14:39.13:0,39,932	0/0:15,0:14:45.15:0,45,1086	0/0:15,0:15:42.14:0,42,1074	0/0:28,0:28:78.23:0,78,1844	0/0:28,0:28:78.20:0,78,1803	0/0:18,0:18:54.19:0,54,1299
chr10	10953257	.	GA	G	1306.97	PASS	AB=0.793;AC=21;AF=0.375;AN=56;BaseQRankSum=2.280;DP=602;FS=2.249;HRun=15;HaplotypeScore=96.0254;InbreedingCoeff=0.6083;MQ=79.54;MQ0=3;MQRankSum=1.254;QD=5.01;ReadPosRankSum=1.160;VQSLOD=2.6998;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:42:68.19:0,68,526	0/0:13,0:13:23.85:0,24,190	0/0:42,0:30:14.37:0,14,163	0/0:35,0:21:10.70:0,11,102	0/1:15,4:22:17.26:132,0,17	0/0:11,0:15:31.04:0,31,216	0/0:12,1:22:13.51:0,14,226	1/1:6,2:22:27.52:101,28,0	0/0:15,1:23:40.75:0,41,336	0/0:21,0:21:8.11:0,8,197	0/1:19,1:22:5.99:6,0,162	1/1:15,3:19:20.45:135,20,0	1/1:11,10:21:9.25:185,9,0	1/1:9,8:18:40.03:243,40,0	0/0:28,2:31:33.55:0,34,500	0/0:13,1:16:22.39:0,22,293	0/0:23,3:27:21.28:0,21,416	0/0:8,0:8:17.97:0,18,152	1/1:2,1:10:15.97:64,16,0	1/1:6,1:21:26.93:87,27,0	1/1:5,1:17:17.02:60,17,0	1/1:10,6:17:33.49:200,33,0	0/0:12,0:12:4.27:0,4,143	0/1:14,4:19:22.43:22,0,216	0/1:10,10:21:0.83:220,0,1	0/0:21,1:26:16.34:0,16,233	0/1:24,6:32:53.18:53,0,286	0/0:8,0:8:8.96:0,9,68
chr10	10953322	.	GA	G	2259.30	PASS	AB=0.807;AC=21;AF=0.375;AN=56;BaseQRankSum=5.715;DP=596;FS=3.438;HRun=13;HaplotypeScore=86.1032;InbreedingCoeff=0.4108;MQ=74.71;MQ0=1;MQRankSum=-0.585;QD=7.51;ReadPosRankSum=4.259;VQSLOD=3.0050;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,31:38:65.19:476,65,0	0/0:6,0:6:14.98:0,15,135	0/0:50,0:25:15.01:0,15,133	0/0:36,0:22:23.06:0,23,163	0/1:19,4:23:29.92:108,0,30	0/1:6,20:27:5.65:297,0,6	1/1:4,22:26:11.05:345,11,0	0/1:23,4:27:28.15:28,0,334	1/1:5,13:19:37.81:268,38,0	0/0:23,1:24:29.46:0,29,421	0/0:11,1:12:21.01:0,21,192	1/1:3,17:21:40.80:290,41,0	1/1:5,12:17:0.64:167,1,0	1/1:8,6:15:16.87:115,17,0	0/0:32,0:32:69.78:0,70,607	0/0:17,2:20:26.01:0,26,400	0/0:23,0:23:51.78:0,52,471	0/0:16,0:16:32.43:0,32,398	0/1:13,2:16:10.96:11,0,202	0/0:16,0:18:35.70:0,36,308	0/1:10,2:12:10.78:11,0,212	0/1:10,7:18:52.67:138,0,53	0/0:17,0:17:41.93:0,42,378	0/0:18,0:18:30.63:0,31,435	1/1:6,12:18:10.30:177,10,0	0/0:11,0:11:20.98:0,21,190	0/1:20,2:24:18.02:18,0,278	0/0:8,0:9:2.39:0,2,125
chr10	10954745	.	TA	T	351.54	PASS	AB=0.700;AC=6;AF=0.107;AN=56;BaseQRankSum=2.546;DP=641;FS=6.110;HRun=16;HaplotypeScore=84.9887;InbreedingCoeff=0.5564;MQ=73.51;MQ0=2;MQRankSum=2.073;QD=3.70;ReadPosRankSum=1.641;VQSLOD=0.8195;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:47:29.03:0,29,143	0/0:9,0:9:26.85:0,27,211	0/0:27,1:17:14.17:0,14,92	0/0:22,0:17:9:0,9,65	0/0:25,1:26:26.77:0,27,307	0/0:5,0:21:19.84:0,20,99	0/0:6,0:17:14.13:0,14,73	1/1:18,21:39:43.08:257,43,0	0/0:6,0:16:14.19:0,14,72	0/0:20,0:20:17.18:0,17,126	0/0:18,0:22:44.70:0,45,352	0/0:18,1:19:22.10:0,22,264	0/0:22,0:23:23.65:0,24,240	0/0:10,0:15:17.80:0,18,134	0/0:19,1:20:20.80:0,21,260	0/0:30,1:32:53.32:0,53,501	0/0:28,1:35:27.65:0,28,321	0/0:10,0:10:15.92:0,16,125	1/1:10,11:21:8.83:138,9,0	0/1:12,10:24:24.98:60,0,25	0/1:7,4:11:15.09:27,0,15	0/0:12,2:16:20.83:0,21,158	0/0:15,1:16:11.45:0,11,159	0/0:26,0:26:28.72:0,29,220	0/0:29,0:30:56.27:0,56,486	0/0:29,1:31:19.11:0,19,275	0/0:25,0:27:39.09:0,39,290	0/0:17,0:17:45.77:0,46,363
chr10	10954914	.	T	TCCTTC	28005.49	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=-15.109;DP=826;FS=10.824;HRun=0;HaplotypeScore=133.1013;InbreedingCoeff=0.9959;MQ=64.93;MQ0=3;MQRankSum=-4.403;QD=57.62;ReadPosRankSum=2.049;VQSLOD=5.4794;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,116,2366	1/1:0,15:15:36.12:1045,36,0	0/0:32,0:25:59.13:0,59,1099	0/0:26,0:19:19.10:0,19,454	0/0:28,0:28:84.26:0,84,1612	0/0:21,0:21:63.19:0,63,1225	0/0:24,0:24:69.23:0,69,1378	1/1:4,39:48:99:2659,127,0	0/0:30,0:30:90.30:0,90,1764	1/1:0,31:35:99:2722,102,0	1/1:1,27:30:60.12:1483,60,0	0/0:31,0:31:90.28:0,90,1723	0/0:25,0:25:75.19:0,75,1439	0/0:20,0:20:57.18:0,57,1087	1/1:1,35:36:60.21:1936,60,0	1/1:0,35:35:81.28:2541,81,0	1/1:3,28:34:39.13:1257,39,0	1/1:5,11:21:62.16:1491,62,0	1/1:5,21:26:19.41:1442,19,0	1/1:1,18:20:54.18:1475,54,0	1/1:2,44:50:93.18:2806,93,0	0/0:32,0:32:90.30:0,90,1769	1/1:1,24:26:51.17:1501,51,0	1/1:3,28:37:54.66:1744,55,0	0/0:24,0:24:66.20:0,66,1393	1/1:1,30:33:93.29:2570,93,0	1/1:0,22:25:26.94:850,27,0	1/1:0,10:10:15.05:484,15,0
chr10	10956506	.	T	TC	4139.74	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-11.867;DP=595;FS=11.988;HRun=6;HaplotypeScore=63.0523;InbreedingCoeff=0.9941;MQ=73.33;MQ0=0;MQRankSum=-2.734;QD=27.06;ReadPosRankSum=3.518;VQSLOD=3.5065;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,25:31:60.19:755,60,0	0/0:10,0:10:27.06:0,27,275	0/0:28,0:27:59.73:0,60,590	0/0:38,0:38:86.16:0,86,845	0/0:23,0:23:54.11:0,54,550	1/1:1,19:20:45.14:566,45,0	1/1:7,12:19:30.10:377,30,0	0/0:25,0:25:57.12:0,57,576	1/1:1,15:16:39.12:491,39,0	0/0:18,0:18:42.07:0,42,423	0/0:18,0:18:39.08:0,39,397	1/1:3,18:21:44.81:566,45,0	1/1:2,10:12:24.08:302,24,0	1/1:3,17:20:54.16:668,54,0	0/0:24,0:24:63.14:0,63,641	0/0:22,0:22:45.09:0,45,459	0/0:30,0:30:78.17:0,78,795	0/0:17,0:17:48.11:0,48,490	0/0:16,0:16:39.08:0,39,397	0/0:19,0:19:36.06:0,36,367	0/0:35,0:35:87.18:0,87,887	1/1:0,14:14:33.11:415,33,0	0/0:21,0:21:51.11:0,51,520	0/0:26,0:26:63.14:0,63,642	0/0:22,0:22:54.11:0,54,550	0/0:21,0:21:57.13:0,57,581	0/0:25,0:25:60.13:0,60,611	0/0:4,0:4:12.03:0,12,122
chr10	10956821	.	G	GA	2423.46	PASS	AB=0.841;AC=14;AF=0.250;AN=56;BaseQRankSum=-9.038;DP=690;FS=3.695;HRun=10;HaplotypeScore=71.1698;InbreedingCoeff=0.6522;MQ=70.45;MQ0=0;MQRankSum=-1.897;QD=14.09;ReadPosRankSum=0.580;VQSLOD=3.9438;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:86.81:0,87,707	0/0:12,0:12:29.92:0,30,240	0/1:19,1:20:15.32:15,0,96	0/1:16,0:18:4.93:5,0,124	1/1:6,27:34:56.26:738,56,0	0/0:25,0:25:62.84:0,63,508	0/0:23,0:23:62.88:0,63,511	0/0:35,0:36:88.90:0,89,719	0/0:28,1:31:47.91:0,48,583	0/0:33,0:33:68.88:0,69,565	0/0:20,0:20:41.91:0,42,345	1/1:2,15:18:11.66:337,12,0	0/1:3,8:11:6.72:142,0,7	1/1:4,21:25:51.13:544,51,0	0/0:36,0:36:86.83:0,87,708	0/0:18,2:20:21.81:0,22,377	0/0:38,0:39:82.89:0,83,668	0/0:21,0:21:53.82:0,54,431	0/0:28,0:28:68.90:0,69,566	0/0:24,0:24:58.99:0,59,488	0/0:28,1:30:53.93:0,54,636	1/1:7,8:15:18.52:193,19,0	0/0:20,0:20:47.92:0,48,390	0/0:30,0:30:68.87:0,69,566	1/1:4,22:26:38.52:615,39,0	0/0:28,1:30:38.95:0,39,513	0/0:24,1:26:38.95:0,39,516	0/1:4,1:5:17:17,0,84
chr10	10958741	.	G	GA	7688.91	PASS	AB=0.808;AC=37;AF=0.661;AN=56;BaseQRankSum=-7.608;DP=574;FS=1.246;HRun=11;HaplotypeScore=104.5139;InbreedingCoeff=0.7768;MQ=80.68;MQ0=1;MQRankSum=-2.338;QD=19.08;ReadPosRankSum=1.340;VQSLOD=4.9969;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:29:73.63:0,74,547	1/1:0,9:9:21.04:213,21,0	0/0:25,0:20:18.64:0,19,140	0/0:31,0:26:3.87:0,4,79	1/1:6,23:29:45.83:628,46,0	0/0:24,0:25:55.78:0,56,421	0/0:12,0:12:29.82:0,30,225	1/1:5,19:26:53.51:480,54,0	0/0:20,0:20:44.81:0,45,347	1/1:4,15:19:42.07:420,42,0	1/1:3,20:23:27.94:506,28,0	0/0:13,0:14:31.88:0,32,234	0/0:14,0:14:32.87:0,33,255	0/1:12,1:13:0.56:1,0,179	1/1:6,27:33:11.46:656,11,0	1/1:1,16:17:30.06:305,30,0	0/1:7,19:26:29.81:449,0,30	1/1:1,10:13:29.72:266,30,0	1/1:7,12:20:21.65:370,22,0	1/1:2,17:20:47.12:501,47,0	1/1:1,18:19:45.09:457,45,0	0/1:10,1:11:3.55:4,0,159	1/1:5,22:28:53.94:532,54,0	1/1:1,8:9:24.05:244,24,0	1/1:5,15:22:5.14:379,5,0	1/1:6,13:19:39.04:385,39,0	1/1:8,24:34:65.77:628,66,0	1/1:3,9:12:27.03:266,27,0
chr10	10959146	.	C	CAA	6259.41	PASS	AB=0.669;AC=30;AF=0.536;AN=56;BaseQRankSum=-1.985;DP=544;FS=1.232;HRun=10;HaplotypeScore=75.2970;InbreedingCoeff=0.7254;MQ=78.60;MQ0=0;MQRankSum=2.335;QD=18.46;ReadPosRankSum=-3.083;VQSLOD=3.2474;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:52.62:0,53,523	0/1:2,8:13:4.46:260,0,4	0/1:14,0:15:33.98:34,0,60	0/0:15,0:14:13.40:0,13,125	0/0:32,0:33:86.86:0,87,844	0/0:25,0:25:54.09:0,54,549	0/0:9,0:9:18.04:0,18,183	1/1:10,0:49:50.93:271,51,0	0/0:16,0:16:42.09:0,42,427	1/1:4,24:31:77.67:1059,78,0	1/1:5,19:27:65.10:841,65,0	0/0:11,0:13:23.52:0,24,277	0/0:15,0:15:42.07:0,42,420	0/0:12,0:12:36.08:0,36,366	1/1:4,11:17:26.06:331,26,0	1/1:0,6:6:9.03:134,9,0	1/1:6,11:17:30.02:419,30,0	1/1:1,11:13:27.09:402,27,0	1/1:5,0:18:33.50:147,33,0	0/1:3,0:23:9.16:128,0,9	1/1:6,0:12:12.48:44,12,0	0/0:12,0:12:33.07:0,33,336	1/1:8,16:26:39.75:489,40,0	1/1:3,11:14:24.08:358,24,0	0/0:32,0:32:70.83:0,71,730	1/1:4,13:19:44.58:589,45,0	1/1:5,20:27:44.12:599,44,0	0/1:4,3:12:12.98:154,0,13
chr10	10960752	.	T	TA	3725.38	PASS	AB=0.993;AC=16;AF=0.286;AN=56;BaseQRankSum=3.598;DP=586;FS=3.513;HRun=5;HaplotypeScore=66.9598;InbreedingCoeff=0.6423;MQ=63.98;MQ0=6;MQRankSum=1.964;QD=15.27;ReadPosRankSum=4.256;VQSLOD=2.9058;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:38,0:38:49.87:50,0,71	0/0:5,0:5:15.04:0,15,161	0/0:18,0:13:9.20:0,9,149	0/0:15,0:11:19.98:0,20,223	1/1:0,18:17:51.17:671,51,0	0/1:25,0:25:33.64:34,0,36	0/1:34,0:35:15.12:64,0,15	0/0:37,0:37:87.18:0,87,917	0/1:18,0:18:23.75:24,0,39	0/0:20,0:20:48.11:0,48,509	0/0:21,0:21:60.15:0,60,643	1/1:4,22:25:42.13:552,42,0	1/1:2,18:20:45.14:583,45,0	1/1:2,17:19:33.11:434,33,0	0/0:21,0:21:54.13:0,54,580	0/0:12,0:12:36.08:0,36,381	0/0:15,0:15:45.10:0,45,475	0/0:19,0:19:51.13:0,51,547	0/0:27,0:25:63.13:0,63,661	0/0:13,0:13:36.09:0,36,386	0/0:17,0:17:48.10:0,48,505	1/1:3,14:17:39.04:491,39,0	0/0:12,0:12:33.08:0,33,348	0/0:16,0:16:45.10:0,45,476	1/1:1,27:27:63.20:823,63,0	0/0:26,0:26:69.17:0,69,740	0/0:31,0:31:81.18:0,81,860	0/0:16,0:16:45.11:0,45,483
chr10	10960756	.	A	AAG	4663.07	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-11.288;DP=601;FS=29.258;HRun=0;HaplotypeScore=77.4952;InbreedingCoeff=0.9594;MQ=65.78;MQ0=5;MQRankSum=-1.468;QD=36.72;ReadPosRankSum=2.207;VQSLOD=3.7628;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,31:41:93.32:1528,93,0	0/0:5,0:5:9.03:0,9,112	0/0:19,0:13:20.87:0,21,186	0/0:13,0:10:13.67:0,14,199	0/0:18,0:17:13.68:0,14,37	1/1:3,25:28:66.22:1072,66,0	1/1:4,35:39:84.29:1373,84,0	0/0:37,0:37:81.20:0,81,970	1/1:2,17:19:42.14:690,42,0	0/0:22,0:22:57.12:0,57,640	0/0:21,0:21:51.15:0,51,625	0/0:22,0:21:12.76:0,13,35	0/0:21,0:21:21.08:0,21,99	0/0:21,0:21:19.62:0,20,127	0/0:21,0:21:54.16:0,54,663	0/0:12,0:12:30.08:0,30,361	0/0:18,0:18:42.08:0,42,481	0/0:19,0:19:51.15:0,51,624	0/0:27,0:25:54.08:0,54,616	0/0:13,0:13:27.08:0,27,337	0/0:17,0:17:42.12:0,42,512	0/0:18,0:18:22.29:0,22,115	0/0:14,0:14:36.08:0,36,413	0/0:16,0:16:45.12:0,45,538	0/0:29,0:28:21.59:0,22,98	0/0:25,0:25:66.66:0,67,804	0/0:31,0:31:81.21:0,81,964	0/0:15,0:15:36.11:0,36,448
chr10	10961646	.	T	TTTTGTTTG	7963.10	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=4.157;DP=535;FS=1.436;HRun=0;HaplotypeScore=131.0035;InbreedingCoeff=0.9406;MQ=61.27;MQ0=3;MQRankSum=-5.512;QD=27.46;ReadPosRankSum=-0.101;VQSLOD=4.6276;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,0:25:35.77:318,36,0	0/0:7,0:7:15.05:0,15,349	0/0:14,0:12:11.17:0,11,177	0/0:12,0:9:2.06:0,2,252	1/1:10,0:34:41.85:1075,42,0	1/1:9,0:17:17.96:146,18,0	1/1:0,0:3:5.99:49,6,0	1/1:29,0:44:47.88:451,48,0	1/1:2,0:17:41.90:341,42,0	0/0:21,0:21:42.14:0,42,1024	0/0:12,0:12:24.08:0,24,614	1/1:6,12:20:30.10:1241,30,0	1/1:7,6:17:15.05:620,15,0	1/1:4,11:17:30.10:1235,30,0	0/0:24,0:24:66.17:0,66,1468	0/0:14,0:14:36.11:0,36,834	0/0:22,0:22:51.10:0,51,988	0/0:25,0:25:59.85:0,60,1192	1/1:15,0:29:41.95:385,42,0	1/1:2,0:16:32.99:359,33,0	1/1:3,0:9:11.97:97,12,0	1/1:5,10:19:33.04:1122,33,0	0/0:19,0:19:42.06:0,42,990	0/0:13,0:13:29.15:0,29,752	1/1:8,0:22:15.05:523,15,0	0/0:18,0:18:39.11:0,39,893	0/0:28,0:28:54.17:0,54,1295	0/0:16,0:16:33.09:0,33,790
chr10	10962533	.	TAA	T	2087.59	PASS	AB=0.819;AC=16;AF=0.286;AN=56;BaseQRankSum=2.738;DP=372;FS=0.565;HRun=10;HaplotypeScore=66.4445;InbreedingCoeff=0.7456;MQ=53.38;MQ0=9;MQRankSum=2.395;QD=19.69;ReadPosRankSum=1.935;VQSLOD=2.5435;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:15:31.58:0,32,272	0/0:3,0:3:9.03:0,9,143	0/0:5,0:4:9:0,9,116	0/0:5,0:5:15.03:0,15,197	1/1:1,11:12:27.06:301,27,0	0/0:8,0:7:15.01:0,15,137	0/0:9,0:9:9:0,9,82	1/1:7,3:10:2.21:86,2,0	0/0:17,0:17:36.03:0,36,349	0/0:12,0:12:33.11:0,33,510	0/0:23,0:24:63.16:0,63,932	1/1:2,12:14:33.09:365,33,0	1/1:2,11:13:20.98:292,21,0	1/1:0,7:7:9.02:100,9,0	0/0:20,0:20:51.17:0,51,775	0/0:15,0:15:36.12:0,36,562	0/0:16,0:15:39.09:0,39,567	0/0:26,0:25:69.21:0,69,1071	0/1:7,1:8:17.69:18,0,41	0/0:13,2:15:19.28:0,19,53	0/1:4,2:5:21.22:83,0,21	1/1:1,15:16:42.11:466,42,0	0/0:18,0:17:46.33:0,46,645	0/0:10,0:10:27.09:0,27,429	1/1:1,18:18:51.14:569,51,0	0/0:16,0:17:44.51:0,45,657	0/0:20,0:19:60.20:0,60,939	0/0:6,0:6:18.06:0,18,286
chr10	10962536	.	A	AAAAAAACC	4659.25	PASS	AB=0.716;AC=12;AF=0.214;AN=56;BaseQRankSum=-0.252;DP=384;FS=26.296;HRun=0;HaplotypeScore=102.2986;InbreedingCoeff=0.5449;MQ=56.92;MQ0=8;MQRankSum=-10.325;QD=46.59;ReadPosRankSum=-0.725;VQSLOD=2.7602;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,12:15:32.14:1116,32,0	0/0:3,0:3:9.03:0,9,234	0/0:7,0:6:12.04:0,12,227	0/0:5,0:5:15.05:0,15,288	0/0:14,0:14:30.06:0,30,536	1/1:3,7:9:21.07:781,21,0	1/1:2,7:13:12.04:466,12,0	0/1:12,0:14:58.18:58,0,69	0/1:1,15:17:41.75:1310,0,42	0/0:12,0:12:28.01:0,28,775	0/0:25,0:25:63.04:0,63,1424	0/0:12,0:12:32.18:0,32,536	0/0:15,0:14:36.07:0,36,619	0/0:7,0:7:9.03:0,9,172	0/0:20,0:20:50.97:0,51,1081	0/0:15,0:15:38.67:0,39,826	0/0:15,0:15:35.83:0,36,837	0/0:25,0:25:69.24:0,69,1765	0/1:3,0:8:44.92:258,0,45	1/1:3,0:14:33.11:626,33,0	0/1:5,0:6:15.32:43,0,15	0/0:15,0:15:41.73:0,42,756	0/0:20,0:17:40.43:0,40,973	0/0:10,0:10:27.09:0,27,701	0/0:19,0:18:51.17:0,51,975	0/0:16,0:16:36.61:0,37,960	0/0:20,0:19:60.08:0,60,1334	0/0:8,0:8:21.07:0,21,510
chr10	10962544	.	C	CA	966.05	PASS	AB=0.933;AC=9;AF=0.161;AN=56;BaseQRankSum=2.514;DP=390;FS=1.567;HRun=10;HaplotypeScore=69.7762;InbreedingCoeff=0.7432;MQ=59.77;MQ0=7;MQRankSum=-4.364;QD=15.09;ReadPosRankSum=-3.016;VQSLOD=3.3380;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:13,1:11:12.27:12,0,52	0/0:3,0:3:9.01:0,9,87	0/0:10,0:9:11.78:0,12,149	0/0:5,0:5:1.12:0,1,63	0/0:14,0:14:42.05:0,42,394	0/0:8,0:8:19.38:0,19,115	0/0:9,0:9:9.11:0,9,45	1/1:7,13:20:14.12:323,14,0	0/0:14,0:14:29.34:0,29,135	0/0:12,0:12:33.05:0,33,319	0/0:23,0:23:60.03:0,60,567	0/0:12,0:12:27.02:0,27,256	0/0:17,0:16:39:0,39,359	0/0:8,0:8:8.96:0,9,84	0/0:21,0:21:45.05:0,45,428	0/0:14,0:14:36.05:0,36,348	0/0:17,0:17:36.05:0,36,347	0/0:26,0:25:72.11:0,72,694	1/1:4,5:9:23.98:260,24,0	1/1:4,11:15:39.12:462,39,0	1/1:3,3:6:6.01:63,6,0	0/0:14,0:14:39.03:0,39,365	0/0:20,0:17:41.54:0,42,385	0/0:11,0:11:30.05:0,30,290	0/0:19,0:18:54.07:0,54,513	0/0:17,0:17:39.06:0,39,376	0/0:19,0:18:51.06:0,51,486	0/0:13,0:13:39.06:0,39,375
chr10	10963094	.	A	AG	299.59	PASS	AB=0.988;AC=10;AF=0.179;AN=56;BaseQRankSum=8.501;DP=437;FS=2.323;HRun=1;HaplotypeScore=51.6283;InbreedingCoeff=0.5207;MQ=52.66;MQ0=14;MQRankSum=3.774;QD=2.34;ReadPosRankSum=1.807;VQSLOD=-0.7010;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:34,0:33:17.53:121,0,18	0/0:2,0:2:6.02:0,6,77	0/0:8,0:5:14.83:0,15,160	0/0:11,0:7:21:0,21,227	0/1:14,0:14:29.30:29,0,50	1/1:16,0:16:19.29:66,19,0	0/1:18,0:17:47.73:48,0,56	0/0:27,0:22:66.12:0,66,760	1/1:13,0:12:16.61:54,17,0	0/0:18,0:18:54:0,54,611	0/0:16,0:15:42.03:0,42,477	0/0:15,0:15:28.72:0,29,183	0/0:14,0:13:29.99:0,30,135	0/0:11,0:11:20.03:0,20,84	0/0:19,0:19:54.01:0,54,610	0/0:15,0:15:45.09:0,45,524	0/0:20,0:20:54.05:0,54,616	0/0:25,1:26:50.08:0,50,753	0/1:18,1:13:1.49:1,0,335	0/0:13,0:12:23.13:0,23,328	0/0:18,0:18:39.14:0,39,529	0/0:8,0:8:17.11:0,17,92	0/0:8,0:7:21.01:0,21,238	0/0:14,0:14:38.89:0,39,450	1/1:12,2:14:23.43:137,23,0	0/0:20,0:19:56.87:0,57,635	0/0:17,0:16:42.19:0,42,550	0/0:9,0:9:26.51:0,27,258
chr10	10963095	.	G	GA	2317.36	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-1.094;DP=443;FS=2.673;HRun=9;HaplotypeScore=46.6928;InbreedingCoeff=0.9189;MQ=52.90;MQ0=14;MQRankSum=2.841;QD=14.48;ReadPosRankSum=1.278;VQSLOD=3.4251;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,28:32:57.15:629,57,0	0/0:2,0:2:6:0,6,52	0/0:8,0:5:15:0,15,130	0/0:11,0:7:21:0,21,182	1/1:4,10:14:24.02:248,24,0	1/1:1,15:16:27.07:299,27,0	1/1:6,12:17:30.08:332,30,0	0/0:27,0:22:62.98:0,63,546	1/1:1,12:12:24.03:253,24,0	0/0:18,0:18:41.97:0,42,365	0/0:16,0:15:34.54:0,35,290	1/1:4,1:14:28.70:166,29,0	1/1:1,0:13:31.25:156,31,0	1/1:1,1:12:19.89:99,20,0	0/0:22,0:22:47.95:0,48,416	0/0:15,0:15:44.99:0,45,390	0/0:20,0:20:50.99:0,51,441	0/0:26,0:26:59.96:0,60,519	0/0:18,0:14:16.41:0,16,225	0/0:12,1:12:1.30:0,1,213	0/0:18,0:18:11.76:0,12,326	1/1:5,0:10:8.56:43,9,0	0/0:8,0:7:17.99:0,18,156	0/0:14,0:14:38.99:0,39,337	1/1:3,13:16:30:306,30,0	0/0:20,0:19:53.59:0,54,452	0/0:16,1:16:8.80:0,9,305	0/0:9,0:9:14.98:0,15,130
chr10	10963363	.	AT	A	1794.57	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=8.607;DP=514;FS=1.710;HRun=10;HaplotypeScore=54.3482;InbreedingCoeff=0.8542;MQ=77.68;MQ0=0;MQRankSum=-2.163;QD=17.59;ReadPosRankSum=-0.932;VQSLOD=3.6809;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,1:29:40.12:0,40,670	0/0:10,0:10:24.02:0,24,252	0/0:12,2:14:4.73:0,5,234	0/0:19,0:19:39.18:0,39,378	0/0:27,1:28:43.13:0,43,704	0/0:13,1:15:13.03:0,13,357	0/0:17,0:18:47.92:0,48,498	1/1:4,28:32:83.94:722,84,0	0/0:16,0:16:45.10:0,45,487	0/0:17,0:17:43:0,43,467	0/0:23,0:23:60.63:0,61,664	0/0:14,1:15:10.04:0,10,339	0/0:10,0:10:24.06:0,24,265	0/0:6,0:6:18.05:0,18,198	0/0:22,0:21:63.16:0,63,689	0/0:19,0:19:51.58:0,52,553	0/0:17,0:17:45.07:0,45,477	0/0:23,0:23:56.95:0,57,599	1/1:9,9:18:26.95:234,27,0	1/1:5,32:38:64.69:711,65,0	1/1:1,13:14:5.81:279,6,0	0/0:17,0:17:39.11:0,39,431	0/0:18,0:18:48.10:0,48,506	0/0:9,1:10:1.02:0,1,239	0/0:14,0:14:39.11:0,39,431	0/0:18,0:18:42.11:0,42,457	0/0:22,0:22:57.14:0,57,623	0/0:12,0:12:30.06:0,30,322
chr10	10963698	.	TAC	T	6249.77	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=11.332;DP=653;FS=6.952;HRun=0;HaplotypeScore=84.3728;InbreedingCoeff=0.9886;MQ=60.65;MQ0=2;MQRankSum=0.925;QD=28.15;ReadPosRankSum=-0.513;VQSLOD=5.4539;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,36:45:90.12:1102,90,0	0/0:9,0:9:24.08:0,24,396	0/0:17,0:5:9.03:0,9,142	0/0:20,1:14:19.71:0,20,250	0/0:7,0:28:67.85:0,68,626	1/1:4,18:22:48.15:601,48,0	1/1:3,18:21:42.13:525,42,0	1/1:6,31:37:93.04:1089,93,0	1/1:3,22:25:69.22:863,69,0	0/0:40,0:40:99:0,108,1723	0/0:27,0:27:72.23:0,72,1151	0/0:25,0:25:72.25:0,72,1183	0/0:19,0:19:51.16:0,51,816	0/0:20,0:20:54.18:0,54,885	0/0:30,0:30:84.29:0,84,1387	0/0:22,0:22:60.20:0,60,979	0/0:20,0:20:57.19:0,57,941	0/0:18,0:18:51.03:0,51,761	1/1:3,8:11:24.02:267,24,0	1/1:2,30:32:84.27:1051,84,0	1/1:5,24:29:60.19:751,60,0	0/0:18,0:18:48.15:0,48,762	0/0:18,0:18:51.12:0,51,809	0/0:19,0:19:54.16:0,54,865	0/0:0,0:18:45.02:0,45,398	0/0:21,0:21:57.19:0,57,942	0/0:24,0:24:28.71:0,29,992	0/0:16,0:16:42.14:0,42,694
chr10	10964157	.	T	TACGCGCACACAC	1581.51	PASS	AB=0.736;AC=13;AF=0.241;AN=54;BaseQRankSum=0.967;DP=612;FS=11.641;HRun=0;HaplotypeScore=195.8907;InbreedingCoeff=0.4378;MQ=66.09;MQ0=12;MQRankSum=-7.181;QD=7.91;ReadPosRankSum=-4.100;VQSLOD=0.6776;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:35:69.23:0,69,1259	0/0:7,0:6:13.57:0,14,221	0/0:34,0:17:38.81:0,39,628	0/0:32,0:17:50.96:0,51,898	0/1:6,0:19:0:0,0,0	0/0:6,0:14:21.07:0,21,437	0/0:18,0:32:74.90:0,75,1530	0/1:24,0:21:19.74:151,0,20	0/0:14,0:22:56.80:0,57,1054	0/0:14,0:14:2.70:0,3,93	0/0:13,0:13:14.64:0,15,229	1/1:9,12:25:8.57:275,9,0	1/1:11,9:22:17.60:668,18,0	1/1:6,0:14:2.96:267,3,0	0/0:22,0:21:11.91:0,12,314	0/0:27,0:27:39.39:0,39,804	0/0:29,0:28:42.14:0,42,921	0/0:26,0:26:2.22:0,2,637	0/1:5,0:23:48.69:148,0,49	1/1:5,0:20:9.02:138,9,0	0/1:3,0:31:3.67:80,0,4	./.	0/1:21,0:21:5.41:5,0,255	0/0:26,0:25:30.07:0,30,548	0/0:4,0:19:2.78:0,3,71	0/0:18,0:18:24.29:0,24,161	0/0:18,0:18:22.39:0,22,235	0/0:6,0:6:6.02:0,6,159
chr10	10964159	.	C	CGT	5208.85	PASS	AB=0.901;AC=33;AF=0.589;AN=56;BaseQRankSum=-4.311;DP=614;FS=0.449;HRun=0;HaplotypeScore=119.1137;InbreedingCoeff=0.4740;MQ=63.88;MQ0=14;MQRankSum=-0.740;QD=12.40;ReadPosRankSum=6.311;VQSLOD=4.1534;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:33:69.16:0,69,940	1/1:5,2:6:14.45:163,14,0	0/0:32,0:15:37.37:0,37,560	0/0:32,0:17:48.15:0,48,734	0/1:19,0:19:0.19:8,0,0	0/0:15,0:15:21:0,21,276	0/0:33,0:33:63.18:0,63,867	0/0:24,0:21:18.02:0,18,113	0/0:23,0:23:60.04:0,60,717	1/1:0,12:12:36.12:571,36,0	1/1:1,13:14:15.05:304,15,0	0/1:23,0:23:2.95:3,0,35	0/1:22,0:22:11.86:12,0,53	1/1:15,0:14:5:20,5,0	0/1:3,19:21:21.92:284,0,22	1/1:8,23:31:20.18:538,20,0	1/1:8,21:29:36.48:639,36,0	0/1:7,22:29:10.19:547,0,10	0/1:19,0:19:0.61:1,0,43	1/1:19,0:18:11.56:67,12,0	0/1:33,0:33:1.80:2,0,24	0/1:16,0:16:6.18:6,0,19	1/1:3,19:22:17.56:318,18,0	1/1:3,24:26:29.97:609,30,0	0/1:18,0:18:4.44:4,0,17	1/1:5,15:20:43.53:613,44,0	1/1:15,0:15:33.18:430,33,0	1/1:1,5:6:5.69:72,6,0
chr10	10965639	.	TTATTATTATTATTATTATTAG	T	7359.96	PASS	AB=1.000;AC=22;AF=0.423;AN=52;BaseQRankSum=4.979;DP=276;FS=1.284;HRun=0;HaplotypeScore=138.9424;InbreedingCoeff=0.5351;MQ=48.41;MQ0=2;MQRankSum=-2.000;QD=40.22;ReadPosRankSum=5.890;VQSLOD=3.6115;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:16,0:16:59.56:60,0,422	1/1:3,0:3:3.01:52,3,0	0/0:6,0:3:2.92:0,3,17	0/0:1,0:1:2.90:0,3,16	0/0:4,0:3:8.39:0,8,179	0/0:17,0:17:45.63:0,46,2066	0/0:5,0:5:15.05:0,15,450	0/0:36,0:34:87.14:0,87,2935	0/0:4,0:4:11.97:0,12,332	0/1:14,0:14:74.64:550,0,75	1/1:4,0:4:5.97:88,6,0	./.	0/0:2,0:2:6.02:0,6,105	0/0:2,0:2:6.02:0,6,241	1/1:0,21:21:24.08:1051,24,0	1/1:3,14:16:15.05:865,15,0	1/1:0,16:16:15.05:815,15,0	1/1:1,13:14:5.98:353,6,0	0/0:7,0:7:18.05:0,18,452	0/0:5,0:5:15.04:0,15,575	0/0:3,0:3:8.92:0,9,305	./.	1/1:0,10:10:11.59:461,12,0	0/1:5,0:5:0:0,0,0	0/0:1,0:1:3.01:0,3,163	1/1:2,20:22:51.88:1410,52,0	1/1:2,32:34:27.09:1422,27,0	0/1:7,0:7:17.97:234,0,18
chr10	10967082	.	TTTA	T	4350.17	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=7.683;DP=709;FS=3.691;HRun=0;HaplotypeScore=167.0809;InbreedingCoeff=0.9999;MQ=86.01;MQ0=0;MQRankSum=-6.354;QD=42.23;ReadPosRankSum=2.795;VQSLOD=6.3213;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,132,2909	0/0:16,0:16:48.16:0,48,1104	0/0:21,0:21:60.20:0,60,1293	0/0:27,0:27:68.73:0,69,1506	0/0:19,0:19:57.18:0,57,1244	0/0:25,0:25:75.22:0,75,1629	0/0:22,0:22:66.21:0,66,1476	0/0:28,0:28:84.29:0,84,1912	0/0:28,0:28:78.27:0,78,1786	0/0:28,0:28:81.24:0,81,1763	0/0:14,0:14:36.12:0,36,791	1/1:0,38:38:99:1656,99,0	1/1:0,21:21:54.15:882,54,0	1/1:0,19:19:54.14:889,54,0	0/0:35,0:34:99:0,105,2380	0/0:32,0:32:93.26:0,93,2013	0/0:30,0:30:87.30:0,87,1982	0/0:29,0:29:81.28:0,81,1817	0/0:19,0:19:51.13:0,51,1083	0/0:25,0:25:68.58:0,69,1485	0/0:27,0:27:75.24:0,75,1660	1/1:4,21:25:59.99:923,60,0	0/0:25,0:25:72.20:0,72,1579	0/0:24,0:24:66.23:0,66,1522	0/0:24,0:24:69.22:0,69,1487	0/0:29,0:29:78.27:0,78,1783	0/0:18,0:18:54.17:0,54,1172	0/0:14,0:14:42.14:0,42,967
chr10	10967702	.	A	AT	492.12	PASS	AC=20;AF=0.455;AN=44;BaseQRankSum=2.789;DP=304;FS=2.163;HRun=0;HaplotypeScore=41.9027;InbreedingCoeff=0.7466;MQ=118.58;MQ0=1;MQRankSum=-0.079;QD=25.90;ReadPosRankSum=-4.939;VQSLOD=2.6470;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:0,1:1:3.01:35,3,0	./.	0/0:34,0:34:99:0,99,1315	0/0:22,0:22:62.66:0,63,769	0/0:22,0:22:66.22:0,66,923	1/1:0,1:1:3.01:47,3,0	1/1:0,5:5:12.04:162,12,0	0/0:29,0:29:84.27:0,84,1148	1/1:0,2:2:3.01:48,3,0	1/1:2,0:2:6.02:95,6,0	./.	0/0:13,0:13:33.11:0,33,460	0/0:15,0:15:45.15:0,45,628	0/0:14,0:14:42.13:0,42,570	1/1:0,2:2:3.01:48,3,0	1/1:2,0:2:5.99:50,6,0	./.	./.	0/0:30,0:30:87.29:0,87,1200	0/0:26,0:26:78.25:0,78,1074	0/0:47,0:46:99:0,135,1886	0/0:11,0:11:27.09:0,27,377	1/1:0,1:1:3.01:48,3,0	./.	0/0:17,0:17:51.17:0,51,712	1/1:0,2:2:6.02:94,6,0	1/1:1,0:1:3:25,3,0	./.
chr10	10968613	.	TA	T	2517.61	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=7.629;DP=597;FS=25.922;HRun=5;HaplotypeScore=63.5444;InbreedingCoeff=0.9920;MQ=71.43;MQ0=0;MQRankSum=-1.211;QD=29.27;ReadPosRankSum=-4.901;VQSLOD=0.7152;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:66.18:0,66,881	0/0:9,0:9:27.09:0,27,369	0/0:16,0:16:30.78:0,31,424	0/0:7,0:7:12.85:0,13,193	0/0:49,0:49:99:0,141,1922	0/0:18,0:18:48.16:0,48,654	0/0:9,0:9:27.09:0,27,369	1/1:1,34:35:99:1147,102,0	0/0:22,0:22:60.20:0,60,821	0/0:27,0:27:81.26:0,81,1096	0/0:26,0:26:69.22:0,69,923	0/0:25,0:25:72.24:0,72,982	0/0:20,0:20:54.18:0,54,739	0/0:21,0:21:63.20:0,63,846	0/0:27,0:27:75.25:0,75,1023	0/0:17,0:17:51.17:0,51,698	0/0:31,0:31:90.25:0,90,1195	0/0:19,0:19:57.17:0,57,761	1/1:2,16:18:48.14:545,48,0	1/1:2,18:20:51.14:578,51,0	1/1:0,13:13:36.10:408,36,0	0/0:14,0:14:39.13:0,39,533	0/0:16,0:16:45.15:0,45,616	0/0:12,0:12:33.06:0,33,415	0/0:22,0:22:54.16:0,54,698	0/0:28,0:28:81.27:0,81,1105	0/0:27,0:26:81.26:0,81,1092	0/0:25,0:25:66.22:0,66,903
chr10	10969932	.	CA	C	5708.56	PASS	AB=0.595;AC=35;AF=0.625;AN=56;BaseQRankSum=-5.730;DP=556;FS=20.018;HRun=12;HaplotypeScore=74.9075;InbreedingCoeff=0.5420;MQ=70.71;MQ0=1;MQRankSum=3.279;QD=13.76;ReadPosRankSum=8.672;VQSLOD=2.7575;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:10,32:43:82.64:632,83,0	1/1:0,10:10:23.88:181,24,0	0/0:16,1:15:4.13:0,4,165	0/0:22,1:20:5.03:0,5,181	0/0:23,0:31:29.49:0,29,197	0/1:7,14:22:16.56:242,0,17	1/1:4,16:20:30.43:310,30,0	0/0:18,0:16:32.52:0,33,219	1/1:9,7:16:5.30:183,5,0	1/1:10,19:30:58.07:446,58,0	1/1:3,14:17:14.27:286,14,0	0/1:8,8:16:6.85:105,0,7	0/1:2,11:13:0.62:134,0,1	1/1:13,8:21:34.01:250,34,0	1/1:11,9:20:22.34:333,22,0	0/1:10,13:24:32:257,0,32	1/1:3,23:26:62.72:484,63,0	1/1:10,9:19:16.25:230,16,0	0/0:3,0:12:14.89:0,15,77	0/0:13,0:12:22.37:0,22,132	0/0:2,0:11:1.55:0,2,4	1/1:6,15:21:29.84:232,30,0	0/1:3,16:19:25.06:196,0,25	1/1:10,21:31:74.67:577,75,0	0/0:4,0:12:5.64:0,6,27	1/1:5,12:19:39.89:288,40,0	1/1:9,10:19:29.79:227,30,0	1/1:2,7:9:14.94:116,15,0
chr10	10970058	.	G	GAC	931.60	PASS	AB=0.814;AC=30;AF=0.714;AN=42;BaseQRankSum=-1.176;DP=417;FS=0.000;HRun=0;HaplotypeScore=77.6830;InbreedingCoeff=0.0057;MQ=51.15;MQ0=22;MQRankSum=1.706;QD=3.28;ReadPosRankSum=-0.630;VQSLOD=1.5984;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:22:4.50:22,4,0	1/1:2,0:2:3.01:44,3,0	./.	./.	1/1:10,0:9:2.50:10,2,0	1/1:12,0:12:6.48:62,6,0	1/1:21,0:19:6.47:67,6,0	./.	./.	0/1:12,0:12:18.90:41,0,19	./.	./.	0/0:6,0:10:8.52:0,9,42	0/0:7,0:9:5.68:0,6,28	1/1:6,4:9:6.02:88,6,0	0/1:10,1:14:23.05:61,0,23	1/1:26,2:29:0.09:108,0,0	0/1:16,0:16:25.08:25,0,104	1/1:13,0:9:12.01:110,12,0	1/1:2,0:8:2.78:26,3,0	1/1:25,0:25:5.87:36,6,0	0/0:6,0:8:5.68:0,6,28	./.	0/1:24,7:36:8.62:120,0,9	1/1:14,0:13:2.97:20,3,0	1/1:17,0:15:9.49:97,9,0	0/1:7,1:11:35.07:35,0,46	0/1:2,2:7:31.15:91,0,31
chr10	10970060	.	C	CGG	906.89	PASS	AB=0.807;AC=9;AF=0.161;AN=56;BaseQRankSum=-2.004;DP=436;FS=8.265;HRun=0;HaplotypeScore=86.2748;InbreedingCoeff=0.4703;MQ=50.76;MQ0=24;MQRankSum=-0.226;QD=9.86;ReadPosRankSum=-1.047;VQSLOD=2.2979;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:23:36.03:0,36,496	0/0:3,0:3:4.83:0,5,51	0/0:29,0:13:39.11:0,39,583	0/0:32,0:13:35.70:0,36,471	1/1:11,0:9:5.86:97,6,0	0/0:13,0:13:24.31:0,24,287	0/0:21,0:19:31.16:0,31,443	1/1:5,11:12:16.14:493,16,0	0/0:7,0:5:6.02:0,6,81	0/0:14,0:14:31.81:0,32,367	0/0:5,0:5:2.85:0,3,25	0/0:8,0:8:24.04:0,24,322	0/0:8,0:8:21.03:0,21,250	0/0:7,0:7:18.03:0,18,213	0/0:11,0:10:18.68:0,19,219	0/0:17,0:16:28.65:0,29,364	0/0:32,0:31:75.64:0,76,956	0/0:19,0:19:42.75:0,43,608	0/1:12,2:10:74.19:197,0,74	1/1:8,0:8:8.72:77,9,0	0/1:10,17:28:15.98:98,0,16	0/0:8,0:8:20.94:0,21,267	0/0:13,0:13:30.10:0,30,452	0/0:37,0:37:46.11:0,46,767	0/1:14,1:14:13.81:91,0,14	0/0:18,0:16:38.65:0,39,454	0/0:10,0:9:13.84:0,14,165	0/0:7,0:7:11.09:0,11,97
chr10	10970155	.	T	TG	989.67	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-2.134;DP=387;FS=3.915;HRun=4;HaplotypeScore=40.6255;InbreedingCoeff=0.9676;MQ=71.57;MQ0=5;MQRankSum=1.389;QD=31.92;ReadPosRankSum=1.254;VQSLOD=3.6899;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:72.19:0,72,806	0/0:8,0:8:21.06:0,21,238	0/0:14,0:8:14.95:0,15,157	0/0:20,0:18:47.80:0,48,516	0/0:10,0:9:24.07:0,24,269	0/0:15,0:15:45.10:0,45,496	0/0:26,0:26:66.19:0,66,745	0/0:18,0:18:45.13:0,45,509	0/0:8,0:8:24.07:0,24,272	0/0:14,0:14:42.06:0,42,452	0/0:9,0:9:23.99:0,24,243	1/1:0,8:8:21.07:286,21,0	1/1:0,4:4:12.04:164,12,0	1/1:0,10:10:30.10:410,30,0	0/0:6,0:6:18.05:0,18,204	0/0:10,0:10:24.04:0,24,260	0/0:36,0:36:99:0,102,1128	0/0:20,0:20:51.14:0,51,577	0/0:16,0:16:39.11:0,39,439	0/0:8,0:8:17.97:0,18,176	0/0:12,0:12:33.09:0,33,372	1/1:1,8:9:21.07:286,21,0	0/0:13,0:13:30.09:0,30,340	0/0:14,0:14:39.10:0,39,432	0/0:11,0:9:15.04:0,15,170	0/0:20,0:19:57.16:0,57,645	0/0:17,0:17:51.13:0,51,568	0/0:5,0:5:15:0,15,156
chr10	10970237	.	G	GAA	1967.19	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-3.439;DP=476;FS=13.990;HRun=11;HaplotypeScore=60.4832;InbreedingCoeff=0.9365;MQ=57.37;MQ0=11;MQRankSum=2.128;QD=21.15;ReadPosRankSum=-3.945;VQSLOD=0.2796;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:27:51.67:0,52,493	0/0:6,0:6:11.95:0,12,116	0/0:13,0:4:5.91:0,6,51	0/0:17,0:11:26.79:0,27,233	0/0:0,0:9:14.56:0,15,74	0/0:18,0:20:41.97:0,42,456	0/0:27,0:27:66.04:0,66,627	1/1:14,30:49:93.82:1163,94,0	0/0:6,0:6:18.03:0,18,174	0/0:11,0:12:17.92:0,18,224	0/0:11,0:11:20.09:0,20,226	0/0:12,0:12:23.57:0,24,212	0/0:8,0:8:24.02:0,24,227	0/0:11,0:12:26.74:0,27,245	0/0:14,0:14:42.07:0,42,407	0/0:11,0:11:23.98:0,24,233	0/0:47,0:48:95.70:0,96,902	0/0:23,0:23:43.23:0,43,401	1/1:4,11:14:36.11:485,36,0	1/1:7,8:17:24.25:252,24,0	1/1:2,7:10:17.55:226,18,0	0/0:20,0:20:42.03:0,42,406	0/0:6,0:6:15.02:0,15,145	0/0:16,0:16:42.93:0,43,432	0/0:2,0:15:18.22:0,18,74	0/0:25,0:25:60.03:0,60,592	0/0:16,0:16:32.44:0,32,343	0/0:8,0:7:14.97:0,15,145
chr10	10970452	.	C	CGAT	3670.89	PASS	AB=0.853;AC=42;AF=0.778;AN=54;BaseQRankSum=-2.858;DP=585;FS=7.321;HRun=0;HaplotypeScore=131.7707;InbreedingCoeff=0.2032;MQ=73.53;MQ0=1;MQRankSum=0.421;QD=7.17;ReadPosRankSum=0.691;VQSLOD=2.6750;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:44,0:44:43.84:72,0,44	1/1:2,3:6:7.95:167,8,0	0/0:25,0:18:20.84:0,21,174	0/0:38,0:25:21.15:0,21,192	1/1:9,0:9:1.14:22,1,0	0/1:16,0:16:17.68:36,0,18	1/1:34,0:34:13.96:129,14,0	1/1:31,0:30:50.75:430,51,0	0/1:29,0:29:9.94:141,0,10	1/1:16,0:16:22.84:254,23,0	1/1:7,0:7:7.49:47,7,0	1/1:25,0:25:8.74:83,9,0	1/1:19,0:19:3.97:33,4,0	0/1:21,0:21:14.56:132,0,15	1/1:8,16:24:11.54:226,12,0	1/1:5,20:27:9.01:170,9,0	0/1:5,17:22:3.04:212,0,3	1/1:3,16:20:16.30:272,16,0	1/1:13,0:25:29.85:274,30,0	1/1:3,0:6:2.94:18,3,0	1/1:39,0:38:18.56:141,19,0	1/1:9,0:9:5.99:50,6,0	1/1:11,0:11:5.53:73,6,0	0/1:6,26:32:2.86:264,0,3	0/0:9,0:9:1.55:0,2,4	1/1:16,0:16:16.54:145,17,0	1/1:13,11:24:13.79:279,14,0	./.
chr10	10970473	.	TGACGAC	T	1466.39	PASS	AB=1.000;AC=13;AF=0.250;AN=52;BaseQRankSum=4.527;DP=562;FS=3.194;HRun=0;HaplotypeScore=148.8095;InbreedingCoeff=0.5649;MQ=57.13;MQ0=8;MQRankSum=0.341;QD=8.63;ReadPosRankSum=2.338;VQSLOD=2.8386;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:39,0:38:42.53:43,0,485	0/0:5,0:5:12.04:0,12,305	0/0:23,0:9:8.76:0,9,93	0/0:29,0:14:6.48:0,6,61	1/1:8,0:8:9.03:157,9,0	0/1:16,0:16:47.11:47,0,238	0/0:38,0:38:31.54:0,32,552	0/0:33,0:28:50.89:0,51,605	0/1:29,0:29:99:105,0,366	0/0:14,0:14:27.06:0,27,523	0/0:5,0:5:9.02:0,9,101	1/1:27,0:27:54.47:434,54,0	1/1:19,0:19:37.03:448,37,0	1/1:22,0:22:35.58:335,36,0	0/0:21,0:21:21.78:0,22,544	0/0:28,0:28:23.91:0,24,486	0/0:26,0:26:30.10:0,30,628	0/0:25,0:24:36.12:0,36,770	0/0:18,0:18:37.68:0,38,413	./.	0/0:39,0:36:20.54:0,21,280	./.	0/0:6,0:6:12.04:0,12,220	0/0:32,0:32:21.67:0,22,580	1/1:2,8:10:3.01:65,3,0	0/0:16,0:16:39.08:0,39,551	0/0:21,0:21:35.75:0,36,735	0/0:1,0:1:3.01:0,3,36
chr10	10970485	.	CGA	C	587.09	PASS	AB=0.850;AC=7;AF=0.135;AN=52;BaseQRankSum=8.107;DP=526;FS=1.234;HRun=0;HaplotypeScore=114.6653;InbreedingCoeff=0.3782;MQ=54.26;MQ0=11;MQRankSum=1.930;QD=7.25;ReadPosRankSum=5.098;VQSLOD=3.3599;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:35:56.92:0,57,878	0/0:5,0:5:14.98:0,15,254	0/0:16,0:6:12.04:0,12,184	0/0:19,0:8:9.02:0,9,107	0/1:6,0:6:12.96:13,0,42	0/0:18,0:18:30.08:0,30,441	0/0:37,0:37:45.15:0,45,824	0/0:33,0:27:69.14:0,69,1060	0/0:27,0:27:46.96:0,47,704	0/0:11,0:11:32.73:0,33,524	0/0:5,0:5:14.78:0,15,190	1/1:11,13:24:27.56:340,28,0	0/1:15,5:20:26.17:188,0,26	0/1:14,7:21:32.37:162,0,32	0/0:18,0:18:33.42:0,33,495	0/0:30,0:30:42.47:0,42,537	0/0:22,0:22:36.08:0,36,549	0/0:24,0:23:42.01:0,42,627	0/0:14,0:13:29.42:0,29,410	./.	0/0:46,0:42:41.56:0,42,629	./.	0/0:6,0:6:15.04:0,15,226	0/0:28,0:28:35.62:0,36,499	1/1:9,0:10:2.60:10,3,0	0/0:16,0:16:44.83:0,45,661	0/0:21,0:21:38.51:0,39,641	0/0:2,0:2:5.95:0,6,57
chr10	10970486	.	GACGACCACC	G	271.38	PASS	AB=0.927;AC=9;AF=0.173;AN=52;BaseQRankSum=2.252;DP=520;FS=1.569;HRun=0;HaplotypeScore=157.3229;InbreedingCoeff=-0.0848;MQ=54.38;MQ0=11;MQRankSum=-4.912;QD=1.52;ReadPosRankSum=0.450;VQSLOD=2.3345;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:36,2:36:99:124,0,278	0/0:5,0:5:15.05:0,15,487	0/0:15,0:4:5.09:0,5,88	0/0:18,0:7:6.02:0,6,157	0/1:6,0:6:36.89:37,0,40	0/1:18,1:19:41.89:42,0,86	0/1:18,19:37:28.09:28,0,277	0/0:29,0:23:59.47:0,59,1186	0/1:25,2:27:99:122,0,174	0/0:11,0:11:32.13:0,32,711	0/0:5,0:5:14.63:0,15,196	0/0:24,0:24:1.03:0,1,834	0/1:20,0:20:8.24:8,0,705	0/1:21,0:21:32.42:32,0,653	0/0:18,0:18:39.13:0,39,1210	0/0:30,0:30:47.65:0,48,1424	0/0:23,0:23:39:0,39,1344	0/0:24,0:23:45.15:0,45,1499	0/0:14,0:13:28.40:0,28,428	./.	0/0:45,0:41:42.08:0,42,1159	./.	0/0:6,0:6:15.03:0,15,406	0/0:28,0:28:36.12:0,36,1207	1/1:10,0:10:2.04:6,2,0	0/0:15,0:15:38.97:0,39,732	0/0:21,0:21:38.97:0,39,1231	0/0:2,0:2:6.02:0,6,162
chr10	10970488	.	CG	C	335.67	PASS	AB=0.770;AC=6;AF=0.115;AN=52;BaseQRankSum=7.362;DP=509;FS=6.601;HRun=1;HaplotypeScore=102.6621;InbreedingCoeff=0.3542;MQ=54.13;MQ0=13;MQRankSum=-0.108;QD=4.42;ReadPosRankSum=3.609;VQSLOD=0.7087;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:36:53.27:0,53,701	0/0:5,0:5:14.92:0,15,133	0/0:16,0:4:12.02:0,12,161	0/0:17,0:7:9.03:0,9,121	0/0:6,0:6:7.77:0,8,69	0/0:17,0:17:23.91:0,24,296	0/0:37,0:37:45.13:0,45,667	0/0:28,0:22:62.83:0,63,853	0/0:27,0:27:43.43:0,43,538	0/0:12,0:12:31.54:0,32,370	0/0:5,0:5:14.88:0,15,175	1/1:13,13:26:6.33:224,6,0	0/1:15,5:20:73.51:109,0,74	0/1:13,7:20:44.82:107,0,45	0/0:16,0:16:14.91:0,15,275	0/0:27,0:27:23.78:0,24,291	0/0:23,0:23:38.59:0,39,304	0/0:23,0:22:44.67:0,45,337	0/0:14,0:13:26.12:0,26,290	./.	0/0:42,0:38:41.46:0,41,582	./.	0/0:6,0:6:14.88:0,15,134	0/0:27,0:27:35.66:0,36,274	1/1:10,0:10:0.47:1,0,0	0/0:16,0:15:14.96:0,15,426	0/0:21,0:21:38.68:0,39,371	0/0:2,0:2:5.96:0,6,44
chr10	10970489	.	GACCACC	G	666.96	PASS	AB=1.000;AC=10;AF=0.185;AN=54;BaseQRankSum=1.409;DP=514;FS=0.964;HRun=0;HaplotypeScore=133.0254;InbreedingCoeff=0.5887;MQ=54.26;MQ0=13;MQRankSum=-3.413;QD=4.98;ReadPosRankSum=1.965;VQSLOD=2.6031;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:20,17:35:9.03:185,9,0	0/0:5,0:5:15.04:0,15,321	0/0:18,0:6:6.02:0,6,87	0/0:16,0:6:9.03:0,9,182	0/1:6,0:6:23.60:24,0,43	1/1:6,11:17:9.03:190,9,0	1/1:33,3:36:6.02:88,6,0	0/0:29,0:23:38.34:0,38,843	1/1:15,12:27:12.82:308,13,0	0/0:13,0:13:24.08:0,24,578	0/0:5,0:5:6.02:0,6,130	0/0:26,0:26:46.82:0,47,651	0/0:21,0:21:33.20:0,33,492	0/0:20,0:20:42.56:0,43,552	0/0:16,0:16:39.13:0,39,897	0/0:27,0:27:45.62:0,46,1140	0/0:24,0:24:42.14:0,42,1083	0/0:23,0:22:45.15:0,45,1193	0/0:13,0:11:18.05:0,18,277	./.	0/0:43,0:39:48.10:0,48,1029	0/0:7,0:7:6.02:0,6,103	0/0:6,0:6:12.04:0,12,325	0/0:27,0:27:36.12:0,36,890	0/1:11,0:11:22.51:23,0,48	0/0:15,0:14:21.06:0,21,497	0/0:20,0:21:33.01:0,33,894	0/0:2,0:2:6.02:0,6,130
chr10	10971755	.	CCTCT	C	1544.83	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.050;DP=609;FS=12.394;HRun=0;HaplotypeScore=105.9318;InbreedingCoeff=0.9836;MQ=85.89;MQ0=0;MQRankSum=-1.498;QD=45.44;ReadPosRankSum=1.573;VQSLOD=3.6832;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,132,3419	0/0:6,0:6:12.04:0,12,279	0/0:22,0:22:54.07:0,54,1279	0/0:20,0:20:54.15:0,54,1326	1/1:1,20:21:57.20:1059,57,0	0/0:18,0:17:54.19:0,54,1438	0/0:26,0:26:78.27:0,78,2065	0/0:38,0:38:87.27:0,87,2106	0/0:21,0:21:63.22:0,63,1666	0/0:19,0:19:54.19:0,54,1438	0/0:10,0:10:30.09:0,30,744	0/0:17,0:17:45.15:0,45,1200	0/0:14,0:14:42.14:0,42,1116	0/0:22,0:22:66.23:0,66,1751	0/0:35,0:35:99:0,102,2686	0/0:24,0:24:66.23:0,66,1760	0/0:31,0:31:81.28:0,81,2134	0/0:19,0:19:57.20:0,57,1510	0/0:18,0:18:45.15:0,45,1190	0/0:17,0:17:45.15:0,45,1172	0/0:34,0:34:99:0,102,2708	0/0:12,0:12:36.12:0,36,959	0/0:10,0:10:30.10:0,30,791	0/0:31,0:31:93.32:0,93,2472	1/1:0,13:13:33.11:608,33,0	0/0:26,0:26:78.27:0,78,2074	0/0:21,0:21:48.16:0,48,1266	0/0:17,0:17:51.18:0,51,1360
chr10	10972044	.	TTTATTATTATTATTA	T	1243.64	PASS	AB=1.000;AC=21;AF=0.438;AN=48;BaseQRankSum=5.070;DP=222;FS=2.104;HRun=0;HaplotypeScore=101.5850;InbreedingCoeff=0.1714;MQ=63.26;MQ0=4;MQRankSum=-1.649;QD=9.21;ReadPosRankSum=-4.070;VQSLOD=0.8281;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:13:1.82:5,2,0	1/1:5,0:5:4.83:62,5,0	./.	0/0:3,0:3:0:0,0,0	0/0:12,0:12:0:0,0,0	0/1:13,0:13:63.94:64,0,94	0/0:3,0:3:6.02:0,6,102	1/1:24,15:38:44.99:564,45,0	1/1:4,0:4:3.01:72,3,0	0/0:8,0:7:6.02:0,6,115	1/1:5,0:5:0.89:2,1,0	0/1:2,0:2:28.51:29,0,43	0/0:1,0:1:3.01:0,3,125	0/0:4,0:4:3.01:0,3,49	1/1:4,0:4:1.55:4,2,0	0/0:3,0:3:3.01:0,3,75	0/0:22,0:22:12.31:0,12,282	0/1:15,0:15:48.52:49,0,100	1/1:5,4:10:1.76:325,2,0	1/1:2,4:6:3.01:92,3,0	./.	./.	0/1:6,0:6:18.98:63,0,19	./.	0/0:6,0:6:12.04:0,12,278	0/0:5,0:5:6.02:0,6,160	0/1:13,0:13:49.37:49,0,107	0/0:9,0:8:9.03:0,9,151
chr10	10972077	.	ATTATTATTATTGTTGTTGTTGTTGTTGTTG	A	3586.02	PASS	AB=0.956;AC=28;AF=0.560;AN=50;BaseQRankSum=4.613;DP=168;FS=4.439;HRun=0;HaplotypeScore=111.6570;InbreedingCoeff=-0.0545;MQ=43.03;MQ0=4;MQRankSum=-2.565;QD=30.13;ReadPosRankSum=3.572;VQSLOD=1.7389;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:11:3.01:104,3,0	1/1:5,0:5:8.95:282,9,0	./.	0/0:3,0:2:6.02:0,6,430	1/1:2,0:2:3.01:80,3,0	0/1:2,7:9:23.38:547,0,23	1/1:2,0:2:5.85:34,6,0	0/0:24,0:22:15.92:0,16,1354	1/1:0,5:5:3.01:235,3,0	0/1:7,0:6:31.01:31,0,205	1/1:2,0:2:3.01:96,3,0	0/0:1,0:1:3.01:0,3,40	0/1:2,0:2:43.93:119,0,44	0/1:2,0:2:99:115,0,130	1/1:5,0:5:3.01:105,3,0	0/1:2,0:2:18.98:119,0,19	0/1:17,0:17:47.94:183,0,48	0/1:17,0:17:9.97:358,0,10	0/1:7,0:7:81.50:82,0,626	0/0:10,0:10:21.07:0,21,1012	0/0:4,0:4:12.04:0,12,570	./.	1/1:0,4:4:3.48:233,3,0	./.	0/1:6,0:6:99:192,0,225	1/1:6,0:6:11.50:309,11,0	0/1:8,0:8:11.96:360,0,12	0/0:6,0:5:3.47:0,3,10
chr10	10972080	.	ATTATTATTGTTGTTGTTGTTGTTGTTG	A	4336.01	PASS	AB=0.882;AC=33;AF=0.660;AN=50;BaseQRankSum=4.415;DP=172;FS=0.843;HRun=0;HaplotypeScore=103.2351;InbreedingCoeff=0.0941;MQ=43.51;MQ0=4;MQRankSum=-1.790;QD=34.97;ReadPosRankSum=3.027;VQSLOD=2.7882;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:0,13:13:3.01:161,3,0	1/1:0,5:5:8.95:396,9,0	./.	0/0:4,0:2:6.02:0,6,430	1/1:2,0:2:3.01:82,3,0	0/1:8,0:8:25.82:425,0,26	0/0:2,0:2:5.81:0,6,32	0/0:27,0:25:47.89:0,48,1610	1/1:5,0:5:3.01:194,3,0	0/1:3,5:7:32.59:33,0,216	1/1:0,2:2:3.01:153,3,0	1/1:1,0:1:2.80:13,3,0	0/1:2,0:2:43.90:119,0,44	0/1:2,0:2:94.32:115,0,94	1/1:0,5:5:3.01:162,3,0	1/1:2,0:2:3.01:125,3,0	0/1:3,12:15:11.95:304,0,12	1/1:2,14:16:9.03:538,9,0	0/1:9,0:9:72.48:72,0,991	0/0:10,0:10:21.07:0,21,983	0/0:4,0:4:12.04:0,12,547	./.	1/1:4,0:4:3.90:193,4,0	./.	0/1:6,0:6:83.15:197,0,83	1/1:6,0:6:12.03:347,12,0	1/1:1,7:8:9.03:544,9,0	1/1:5,0:4:1.05:160,1,0
chr10	10972086	.	ATTGTTGTTGTTGTTGTTGTTG	A	3785.12	PASS	AB=1.000;AC=36;AF=0.720;AN=50;BaseQRankSum=5.143;DP=176;FS=6.068;HRun=0;HaplotypeScore=91.0552;InbreedingCoeff=0.3920;MQ=42.39;MQ0=6;MQRankSum=-3.088;QD=34.10;ReadPosRankSum=3.561;VQSLOD=1.3568;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:13:3.01:101,3,0	1/1:5,0:5:8.95:275,9,0	./.	0/0:5,0:2:6.02:0,6,430	1/1:2,0:2:3.01:116,3,0	1/1:8,0:8:9.03:400,9,0	0/1:2,0:2:0:0,0,0	0/0:29,0:27:51.17:0,51,1770	1/1:5,0:5:3.01:153,3,0	0/1:8,0:7:35.97:36,0,171	1/1:2,0:2:3.01:101,3,0	1/1:0,0:1:3.01:64,3,0	1/1:2,0:2:6.02:250,6,0	0/1:2,0:2:16.63:115,0,17	1/1:5,0:5:3.01:109,3,0	1/1:1,0:1:3.01:125,3,0	1/1:13,0:13:6.02:239,6,0	1/1:15,0:15:9.03:403,9,0	0/0:14,0:13:26.12:0,26,1343	0/0:11,0:11:24.01:0,24,1076	0/0:4,0:4:12.04:0,12,547	./.	1/1:4,0:4:3.48:152,3,0	./.	1/1:6,0:6:14.96:320,15,0	1/1:1,4:5:9.03:321,9,0	1/1:7,0:7:9.03:376,9,0	0/1:5,0:4:1.75:127,0,2
chr10	10972094	.	TGTTGTTGTTGTTGTTGTTG	T	2918.99	PASS	AB=1.000;AC=33;AF=0.660;AN=50;BaseQRankSum=6.368;DP=178;FS=2.817;HRun=0;HaplotypeScore=91.2411;InbreedingCoeff=0.4393;MQ=44.27;MQ0=6;MQRankSum=-4.640;QD=29.79;ReadPosRankSum=5.240;VQSLOD=1.7766;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:13:3.01:79,3,0	0/1:5,0:5:14.91:201,0,15	0/0:3,0:2:6.02:0,6,340	0/0:9,0:5:15.05:0,15,902	1/1:0,4:4:9:201,9,0	1/1:7,0:7:9.03:297,9,0	./.	0/0:28,0:26:69.23:0,69,3038	1/1:5,0:5:3.01:131,3,0	0/0:7,0:6:8.78:0,9,229	1/1:2,0:2:3.01:72,3,0	1/1:1,0:1:3.01:59,3,0	1/1:2,0:2:6.02:168,6,0	0/1:3,0:3:19.85:120,0,20	1/1:5,0:5:3.01:80,3,0	1/1:1,0:1:3.01:85,3,0	1/1:12,0:12:6.02:158,6,0	1/1:14,0:14:9.03:309,9,0	0/0:15,0:14:32.14:0,32,1774	0/0:12,0:12:27.09:0,27,1385	0/0:6,0:6:18.06:0,18,927	./.	1/1:4,0:4:3.48:131,3,0	./.	1/1:5,1:6:12.04:412,12,0	0/1:4,0:4:16.52:186,0,17	1/1:7,0:7:9.03:295,9,0	1/1:2,0:2:5.69:103,6,0
chr10	10972881	.	GCCC	G	6159.97	PASS	AB=0.740;AC=43;AF=0.768;AN=56;BaseQRankSum=1.206;DP=476;FS=15.270;HRun=9;HaplotypeScore=91.3852;InbreedingCoeff=0.4333;MQ=59.82;MQ0=9;MQRankSum=-0.825;QD=16.13;ReadPosRankSum=6.293;VQSLOD=1.2398;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:9,26:35:87.26:1186,87,0	1/1:3,0:3:2.96:20,3,0	0/0:29,0:8:15.74:0,16,264	0/0:34,1:8:15.41:0,15,154	1/1:4,0:19:20.64:143,21,0	1/1:9,13:23:60.20:838,60,0	1/1:3,14:17:36.11:494,36,0	0/1:14,0:16:11.39:30,0,11	1/1:10,6:16:27.07:373,27,0	1/1:7,3:10:14.94:182,15,0	1/1:5,3:8:3.46:36,3,0	1/1:3,12:15:18:205,18,0	0/0:3,0:3:0:0,0,0	1/1:0,8:8:15.05:197,15,0	1/1:5,1:6:8.08:106,8,0	1/1:0,11:11:9.01:108,9,0	1/1:17,9:27:20.27:278,20,0	1/1:8,6:16:18.67:271,19,0	0/0:26,0:25:2.95:0,3,303	0/1:5,0:20:3.25:52,0,3	0/1:18,0:18:4.77:5,0,139	1/1:5,19:24:27.05:365,27,0	0/1:3,7:10:0.01:0,0,0	1/1:12,5:18:18.15:239,18,0	1/1:3,0:17:38.51:306,39,0	1/1:15,7:22:42.01:537,42,0	0/1:8,5:14:4.61:148,0,5	1/1:3,1:4:3.01:41,3,0
chr10	10972887	.	CCCCG	C	4189.85	PASS	AB=1.000;AC=33;AF=0.589;AN=56;BaseQRankSum=1.546;DP=503;FS=20.710;HRun=0;HaplotypeScore=113.1576;InbreedingCoeff=0.0422;MQ=60.25;MQ0=10;MQRankSum=-1.547;QD=10.85;ReadPosRankSum=11.063;VQSLOD=-0.2705;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:32,3:35:29.64:801,30,0	1/1:5,0:5:2.96:20,3,0	0/0:29,0:8:15.74:0,16,284	0/0:34,0:7:15.46:0,15,185	1/1:15,0:15:18.71:102,19,0	1/1:24,1:25:38.16:598,38,0	1/1:15,1:16:25.80:323,26,0	0/1:17,0:17:19.66:20,0,97	1/1:15,0:15:2.42:293,2,0	0/1:14,0:14:33.72:128,0,34	1/1:11,0:10:3.90:23,4,0	0/1:16,0:16:16.40:109,0,16	0/0:5,0:5:8.62:0,9,46	1/1:8,0:8:14.56:111,15,0	0/1:7,0:6:4.26:81,0,4	0/1:14,0:14:25.39:77,0,25	0/1:34,0:34:44.22:166,0,44	0/1:19,0:19:0.93:159,0,1	0/0:28,0:27:18.82:0,19,398	0/1:21,0:21:27.54:46,0,28	0/0:21,0:20:18.17:0,18,277	0/1:25,0:25:35.11:161,0,35	0/1:10,0:10:0:0,0,0	0/1:22,0:22:71.18:170,0,71	1/1:16,0:15:34.48:252,34,0	1/1:23,0:22:5.40:391,5,0	0/1:15,0:15:52.06:127,0,52	0/1:3,0:3:19.34:32,0,19
chr10	10972901	.	G	GGA	5289.29	PASS	AB=1.000;AC=43;AF=0.796;AN=54;BaseQRankSum=-0.053;DP=423;FS=39.854;HRun=0;HaplotypeScore=100.3294;InbreedingCoeff=0.5183;MQ=68.80;MQ0=3;MQRankSum=1.213;QD=15.74;ReadPosRankSum=3.727;VQSLOD=2.9859;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:43,0:43:25.59:285,26,0	./.	0/0:18,0:12:19.10:0,19,165	0/0:21,0:10:13.03:0,13,125	1/1:4,0:13:32.68:345,33,0	1/1:19,0:20:9.64:133,10,0	1/1:21,0:21:2.63:155,3,0	0/0:22,0:22:26.03:0,26,433	0/1:10,0:10:4.21:22,0,4	1/1:1,18:20:49.02:610,49,0	1/1:2,8:11:16.88:140,17,0	1/1:9,0:14:16.53:206,17,0	1/1:7,0:7:20.86:208,21,0	1/1:9,0:11:12.13:233,12,0	1/1:1,6:6:9.03:139,9,0	1/1:8,2:10:23.88:275,24,0	1/1:2,20:24:20.55:350,21,0	1/1:3,3:16:20.98:243,21,0	0/0:17,0:16:8.93:0,9,164	0/1:6,0:6:24.31:24,0,37	0/1:17,0:17:82.42:92,0,82	1/1:10,0:18:4.33:196,4,0	1/1:2,0:4:2.97:20,3,0	1/1:13,2:18:45.02:573,45,0	1/1:2,0:12:27.09:407,27,0	1/1:2,4:16:29.15:453,29,0	1/1:1,0:12:3.44:22,3,0	1/1:4,0:4:12.02:158,12,0
chr10	10972967	.	CG	C	2451.73	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=5.539;DP=504;FS=2.073;HRun=5;HaplotypeScore=89.7784;InbreedingCoeff=0.8559;MQ=84.35;MQ0=1;MQRankSum=-3.511;QD=22.09;ReadPosRankSum=0.911;VQSLOD=2.5919;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,32:35:93.26:1054,93,0	0/0:6,0:6:9:0,9,103	0/0:21,0:21:26.62:0,27,604	0/1:15,0:12:11.65:12,0,184	0/0:10,0:10:26.97:0,27,329	1/1:1,16:17:39.07:428,39,0	1/1:4,24:28:60.17:680,60,0	0/0:36,0:36:99:0,99,1289	1/1:0,15:15:39.11:442,39,0	0/0:22,0:22:66.22:0,66,892	0/0:9,0:9:18.05:0,18,233	0/0:20,0:20:57.18:0,57,763	0/0:14,0:14:42.12:0,42,543	0/0:20,0:20:60.14:0,60,780	0/0:8,0:8:18.06:0,18,246	0/0:14,0:14:42.14:0,42,574	0/0:22,0:22:42.14:0,42,568	0/0:20,0:20:51.17:0,51,696	0/0:28,0:28:81.14:0,81,1022	0/0:12,0:12:33.11:0,33,451	0/0:27,0:27:78.26:0,78,1065	0/0:13,0:13:33.11:0,33,448	0/0:9,0:9:27.09:0,27,365	0/0:25,0:25:75.18:0,75,983	0/0:8,0:8:24.08:0,24,328	0/0:24,0:24:72.23:0,72,968	0/0:18,0:18:51.15:0,51,673	0/0:7,0:7:21.02:0,21,237
chr10	10973584	.	T	TA	4135.86	PASS	AB=1.000;AC=48;AF=0.889;AN=54;BaseQRankSum=-4.452;DP=375;FS=8.974;HRun=7;HaplotypeScore=62.8125;InbreedingCoeff=0.3844;MQ=75.07;MQ0=3;MQRankSum=1.567;QD=13.21;ReadPosRankSum=1.467;VQSLOD=2.2949;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:29:19.96:114,20,0	1/1:0,4:4:6.02:71,6,0	0/0:34,0:20:6.10:0,6,109	0/0:27,0:10:10.70:0,11,73	1/1:13,0:13:4.87:65,5,0	0/1:19,0:19:2.22:2,0,3	1/1:8,0:8:10.05:75,10,0	1/1:44,0:44:58.21:361,58,0	1/1:6,0:6:4.54:28,5,0	1/1:2,10:13:30.39:308,30,0	1/1:0,10:10:26.91:261,27,0	1/1:6,0:6:0.56:23,1,0	1/1:7,1:8:0.78:126,1,0	1/1:3,0:3:3:25,3,0	1/1:0,5:5:9.03:106,9,0	1/1:3,9:12:15.04:176,15,0	1/1:1,15:16:30.09:350,30,0	1/1:2,18:20:54.09:612,54,0	1/1:20,0:20:34.73:173,35,0	1/1:7,0:7:5.20:27,5,0	1/1:10,0:10:11.29:61,11,0	./.	1/1:1,5:6:9.03:106,9,0	1/1:2,5:7:16.60:179,17,0	0/1:13,0:13:11.30:50,0,11	1/1:2,16:18:48:483,48,0	1/1:1,8:9:15.04:175,15,0	1/1:0,3:6:18.01:179,18,0
chr10	10973745	.	C	CT	1073.87	PASS	AB=0.907;AC=17;AF=0.304;AN=56;BaseQRankSum=4.437;DP=321;FS=4.685;HRun=12;HaplotypeScore=50.2920;InbreedingCoeff=0.5720;MQ=61.48;MQ0=3;MQRankSum=0.869;QD=9.59;ReadPosRankSum=1.664;VQSLOD=2.4980;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,19:26:20.16:358,20,0	0/0:2,0:2:5.97:0,6,44	0/0:5,0:3:2.96:0,3,22	0/1:10,0:7:3.30:3,0,32	1/1:2,0:8:14.51:69,15,0	1/1:6,8:14:7.98:226,8,0	1/1:1,2:3:6.01:58,6,0	0/0:47,0:47:70.36:0,70,508	1/1:1,4:6:8.08:111,8,0	0/0:7,0:6:11.91:0,12,88	0/0:6,0:6:5.93:0,6,44	0/0:6,0:6:11.92:0,12,87	0/1:7,1:8:5.32:5,0,127	0/0:1,0:1:2.98:0,3,22	0/0:4,0:4:8.94:0,9,66	0/0:6,0:6:11.88:0,12,86	0/0:32,0:32:53.86:0,54,397	1/1:4,11:15:10.98:270,11,0	0/0:21,0:21:47.69:0,48,350	0/0:4,0:4:8.92:0,9,66	0/0:9,0:9:5.94:0,6,44	0/0:1,0:1:2.98:0,3,22	0/0:3,0:3:8.95:0,9,66	0/0:3,0:5:7.05:0,7,34	1/1:0,1:14:25.73:143,26,0	0/0:13,0:13:23.80:0,24,175	0/1:4,1:4:9.20:9,0,54	0/0:34,1:32:39.33:0,39,452
chr10	10974065	.	G	GGT	4977.32	PASS	AB=0.683;AC=35;AF=0.648;AN=54;BaseQRankSum=-6.072;DP=439;FS=7.846;HRun=0;HaplotypeScore=77.1572;InbreedingCoeff=0.3531;MQ=49.53;MQ0=7;MQRankSum=1.872;QD=14.26;ReadPosRankSum=0.830;VQSLOD=4.0317;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:23:11.99:106,12,0	1/1:1,4:6:12.04:187,12,0	0/0:24,0:7:2.95:0,3,27	0/0:21,0:11:20.06:0,20,184	./.	1/1:20,0:22:15:132,15,0	1/1:20,0:20:5.74:37,6,0	1/1:23,0:22:9:79,9,0	1/1:2,0:7:3:26,3,0	0/1:4,8:11:7.45:327,0,7	0/1:4,6:10:13.58:259,0,14	0/0:3,0:10:19.89:0,20,98	0/0:2,0:10:17.04:0,17,84	0/0:3,0:8:14.20:0,14,70	0/1:6,10:16:13.58:259,0,14	1/1:3,11:14:18.06:280,18,0	0/1:10,15:25:11.31:569,0,11	1/1:10,12:22:10.48:591,10,0	1/1:22,0:21:15:147,15,0	1/1:7,0:9:3:26,3,0	0/1:13,0:13:0:0,0,0	0/0:1,0:5:10.56:0,11,48	1/1:0,2:4:6.02:93,6,0	0/1:6,10:17:39.42:343,0,39	1/1:14,0:14:9.01:87,9,0	0/1:13,10:24:99:355,0,100	1/1:5,15:22:21.96:499,22,0	1/1:6,17:24:27.97:576,28,0
chr10	10974186	.	TAA	T	924.29	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=4.289;DP=446;FS=1.552;HRun=5;HaplotypeScore=56.7427;InbreedingCoeff=0.7046;MQ=69.16;MQ0=10;MQRankSum=0.741;QD=16.22;ReadPosRankSum=1.372;VQSLOD=-0.2321;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,102,1798	0/0:10,0:10:30.10:0,30,539	0/0:43,0:12:21.68:0,22,390	0/1:31,0:13:5.58:6,0,276	1/1:0,19:19:57.19:790,57,0	0/0:18,0:18:54.19:0,54,978	0/0:6,0:6:15.05:0,15,251	0/0:32,0:31:87.29:0,87,1541	0/0:7,0:7:21.06:0,21,348	0/0:17,0:17:45.15:0,45,784	0/0:13,0:13:39.13:0,39,698	0/0:8,0:8:24.08:0,24,435	0/0:14,0:14:39.13:0,39,692	0/0:8,0:8:24.07:0,24,404	0/0:12,0:12:36.12:0,36,645	0/0:9,0:9:27.09:0,27,490	0/0:32,0:32:90.27:0,90,1581	0/0:18,0:18:54.18:0,54,968	0/0:32,0:32:87.30:0,87,1563	0/0:12,0:12:36.12:0,36,642	0/0:4,0:4:9.03:0,9,163	0/0:1,0:1:3.01:0,3,53	0/0:6,0:6:15.05:0,15,267	0/0:10,0:10:24.08:0,24,420	1/1:1,6:7:18.06:252,18,0	0/0:23,0:22:66.22:0,66,1162	0/0:14,0:14:39.13:0,39,678	0/0:4,0:4:9.03:0,9,163
chr10	10975217	.	A	AG	22830.25	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-15.097;DP=675;FS=0.000;HRun=0;HaplotypeScore=57.4750;InbreedingCoeff=1.0000;MQ=89.56;MQ0=0;MQRankSum=-4.236;QD=44.50;ReadPosRankSum=5.711;VQSLOD=4.5182;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,40:40:99:1774,111,0	1/1:0,14:14:42.14:671,42,0	0/0:23,0:23:63.19:0,63,833	0/0:26,0:26:62.28:0,62,787	1/1:0,25:25:60.20:947,60,0	1/1:0,24:24:63.21:1007,63,0	1/1:0,23:23:66.23:1055,66,0	0/0:41,0:41:99:0,120,1635	1/1:0,21:21:51.17:815,51,0	1/1:0,25:25:75.24:1175,75,0	1/1:0,23:23:60.20:958,60,0	1/1:0,24:24:66.23:1053,66,0	1/1:0,17:17:48.16:767,48,0	1/1:0,18:18:51.17:815,51,0	1/1:0,36:36:99:1678,105,0	1/1:0,23:23:66.23:1055,66,0	1/1:0,24:24:69.24:1103,69,0	1/1:0,23:23:69.24:1103,69,0	0/0:22,0:22:66.22:0,66,910	0/0:19,0:19:57.19:0,57,797	0/0:31,0:31:90.30:0,90,1257	1/1:0,18:18:48.16:767,48,0	1/1:0,31:31:93.32:1486,93,0	1/1:0,23:23:63.21:1007,63,0	1/1:0,22:22:63.21:1007,63,0	1/1:1,22:23:66.23:1055,66,0	1/1:0,23:23:60.20:958,60,0	1/1:0,13:13:36.12:575,36,0
chr10	10975477	.	C	CATG	6598.02	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-8.707;DP=602;FS=5.025;HRun=0;HaplotypeScore=104.8787;InbreedingCoeff=0.9741;MQ=64.11;MQ0=0;MQRankSum=-0.979;QD=42.84;ReadPosRankSum=-1.971;VQSLOD=5.6948;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:54.16:0,54,774	0/0:10,0:10:18.06:0,18,265	0/0:6,0:6:9.03:0,9,116	0/0:4,0:4:8.82:0,9,88	1/1:2,22:24:51.18:1056,51,0	0/0:29,0:29:72.21:0,72,1019	0/0:24,0:24:60.18:0,60,846	1/1:6,34:40:99:1964,111,0	0/0:27,0:27:66.22:0,66,965	0/0:29,0:29:75.22:0,75,1037	0/0:19,0:19:45.14:0,45,622	0/0:27,0:27:54.16:0,54,758	0/0:21,0:21:54.14:0,54,771	0/0:13,0:13:36.12:0,36,529	0/0:33,0:32:78.26:0,78,1148	0/0:27,0:27:60.19:0,60,849	0/0:27,0:27:63.21:0,63,928	0/0:18,0:18:42.14:0,42,618	1/1:9,9:18:33.05:567,33,0	1/1:3,26:29:63.22:1279,63,0	1/1:4,17:21:35.90:746,36,0	0/0:18,0:18:39.08:0,39,498	0/0:23,0:23:48.16:0,48,707	0/0:10,0:10:24.07:0,24,334	1/1:5,16:21:48.16:985,48,0	0/0:23,0:23:63.21:0,63,924	0/0:14,0:14:36.11:0,36,509	0/0:24,0:24:72.24:0,72,1060
chr10	10975568	.	A	AT	10956	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-6.582;DP=517;FS=11.443;HRun=9;HaplotypeScore=62.0765;InbreedingCoeff=0.9567;MQ=66.21;MQ0=0;MQRankSum=-0.561;QD=25.96;ReadPosRankSum=3.174;VQSLOD=4.9562;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,1:27:29.78:0,30,487	1/1:1,9:10:27.07:299,27,0	0/0:9,0:9:16.99:0,17,129	0/0:8,0:8:6.98:0,7,99	1/1:4,27:31:64.08:891,64,0	0/0:15,0:15:38.94:0,39,331	0/0:19,0:19:38.94:0,39,339	1/1:2,22:24:63.64:698,64,0	0/0:17,0:17:35.97:0,36,308	1/1:8,21:29:17.07:644,17,0	1/1:5,14:19:20.62:442,21,0	1/1:2,16:19:24.06:266,24,0	1/1:1,13:15:33.08:360,33,0	1/1:2,7:9:21.06:231,21,0	1/1:1,21:22:51.14:564,51,0	1/1:2,24:26:66.15:717,66,0	1/1:1,24:25:66.18:730,66,0	1/1:2,13:15:33.09:365,33,0	1/1:2,15:17:48.10:515,48,0	1/1:3,17:20:54.15:597,54,0	1/1:3,6:9:21.05:225,21,0	1/1:3,2:5:6.90:68,7,0	1/1:1,13:14:39.11:431,39,0	1/1:2,11:13:30.08:332,30,0	1/1:3,27:30:81.22:895,81,0	1/1:4,18:21:51.14:564,51,0	1/1:5,26:31:36.83:624,37,0	1/1:1,16:17:45.12:497,45,0
chr10	10975606	.	CT	C	1018.06	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.519;DP=513;FS=2.545;HRun=10;HaplotypeScore=77.9350;InbreedingCoeff=0.8543;MQ=56.97;MQ0=3;MQRankSum=-4.688;QD=17.55;ReadPosRankSum=0.814;VQSLOD=4.4032;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:57.15:0,57,630	0/0:8,0:8:18.05:0,18,199	0/0:8,0:6:8.73:0,9,130	0/0:5,0:4:5.96:0,6,52	1/1:5,29:34:83.95:723,84,0	0/0:17,0:17:51.13:0,51,557	0/0:16,1:17:12.98:0,13,348	0/0:45,1:44:76.17:0,76,1041	0/0:11,0:11:21.06:0,21,232	0/0:30,0:32:74.09:0,74,825	0/0:17,1:18:22.09:0,22,465	0/0:17,0:17:32.60:0,33,351	0/0:14,0:14:33.07:0,33,355	0/0:10,0:10:24.06:0,24,265	0/0:18,1:19:16.07:0,16,394	0/0:32,1:33:43.12:0,43,693	0/0:22,0:22:25.99:0,26,498	0/0:19,2:20:10.07:0,10,339	0/0:16,1:17:21.91:0,22,453	0/0:19,0:20:51.10:0,51,551	0/0:8,0:7:14.97:0,15,141	0/0:4,0:4:12.02:0,12,125	0/0:12,0:12:30.07:0,30,325	0/0:12,0:12:30.07:0,30,324	1/1:7,17:24:47.95:416,48,0	0/0:23,0:22:60.16:0,60,664	0/0:19,0:19:41.88:0,42,420	0/0:17,0:17:42.08:0,42,446
chr10	10977700	.	G	GGATT	10172.07	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-11.909;DP=573;FS=2.150;HRun=0;HaplotypeScore=99.8076;InbreedingCoeff=0.9703;MQ=63.96;MQ0=0;MQRankSum=-4.890;QD=59.14;ReadPosRankSum=0.909;VQSLOD=6.2536;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,31:36:87.17:2104,87,0	0/0:9,0:9:21.07:0,21,392	0/0:18,0:15:42.10:0,42,674	0/0:22,0:22:60.15:0,60,1013	0/0:30,0:30:90.31:0,90,1679	1/1:2,16:18:48.16:1280,48,0	1/1:4,17:23:53.55:1367,54,0	0/0:28,0:28:72.24:0,72,1309	1/1:1,13:15:30.10:800,30,0	0/0:22,0:22:66.21:0,66,1194	0/0:22,0:22:60.21:0,60,1120	1/1:2,20:23:54.19:1439,54,0	1/1:3,18:21:51.17:1339,51,0	1/1:3,15:17:36.08:899,36,0	0/0:17,0:17:42.14:0,42,784	0/0:21,0:21:51.17:0,51,952	0/0:22,0:22:57.19:0,57,1035	0/0:17,0:17:42.14:0,42,781	0/0:16,0:16:36.10:0,36,620	0/0:27,0:27:72.25:0,72,1310	0/0:20,0:20:60.21:0,60,1107	1/1:1,15:16:39.09:945,39,0	0/0:22,0:22:54.17:0,54,992	0/0:15,0:15:33.11:0,33,616	0/0:21,0:21:39.13:0,39,728	0/0:22,0:22:66.20:0,66,1171	0/0:29,0:29:81.28:0,81,1509	0/0:1,0:1:3.01:0,3,56
chr10	10977755	.	TTG	T	3032.22	PASS	AB=0.757;AC=26;AF=0.464;AN=56;BaseQRankSum=3.476;DP=580;FS=8.319;HRun=0;HaplotypeScore=121.1061;InbreedingCoeff=0.7371;MQ=68.02;MQ0=23;MQRankSum=-0.462;QD=11.75;ReadPosRankSum=1.061;VQSLOD=2.8356;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:60.20:0,60,953	1/1:1,8:9:6.02:73,6,0	0/0:37,0:12:2.17:0,2,51	0/0:36,0:9:5.85:0,6,63	1/1:5,1:28:34.70:176,35,0	0/0:17,0:18:1.37:0,1,480	0/0:25,0:25:51.17:0,51,809	0/0:21,0:21:27.09:0,27,436	0/0:24,0:24:30.05:0,30,429	1/1:17,1:17:35.34:393,35,0	1/1:17,0:16:6:60,6,0	0/0:16,0:15:30.02:0,30,452	0/0:22,0:20:44.84:0,45,656	0/0:20,0:19:4.95:0,5,592	1/1:8,5:13:18.01:192,18,0	0/1:18,7:25:7.24:349,0,7	1/1:23,1:23:43.55:516,44,0	1/1:5,16:20:14.87:143,15,0	0/0:19,0:18:38.08:0,38,485	0/0:16,0:15:37.94:0,38,585	0/0:17,0:16:35.93:0,36,470	0/0:18,0:17:41.97:0,42,635	1/1:16,5:20:14.99:155,15,0	1/1:14,1:15:14.76:179,15,0	1/1:2,0:10:11.36:56,11,0	1/1:21,2:22:48.08:558,48,0	1/1:19,7:26:32.56:328,33,0	0/1:4,2:5:39.53:62,0,40
chr10	10977776	.	CACACACAA	C	2735.02	PASS	AB=0.906;AC=21;AF=0.375;AN=56;BaseQRankSum=1.820;DP=616;FS=0.478;HRun=0;HaplotypeScore=171.3953;InbreedingCoeff=0.6870;MQ=47.27;MQ0=54;MQRankSum=-1.728;QD=12.49;ReadPosRankSum=3.586;VQSLOD=2.7074;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:30:67.60:0,68,1596	1/1:8,1:9:9.02:175,9,0	0/0:53,0:4:5.87:0,6,36	0/0:46,0:3:8.84:0,9,59	0/0:28,0:28:60.65:0,61,1202	0/0:21,0:20:48.07:0,48,1250	0/0:28,0:27:62.30:0,62,1305	0/0:16,0:15:26.67:0,27,255	0/0:23,0:23:33.57:0,34,1200	1/1:16,1:15:44.31:444,44,0	1/1:14,0:12:0.47:1,0,0	0/0:19,0:17:37.69:0,38,681	0/0:18,0:16:44.15:0,44,812	0/0:21,0:20:45.01:0,45,913	1/1:17,0:17:14.95:249,15,0	0/1:23,0:22:96.69:499,0,97	1/1:22,1:22:46.78:414,47,0	1/1:21,0:18:8.19:124,8,0	0/0:21,0:19:47.83:0,48,783	0/0:19,0:19:39.79:0,40,585	0/0:21,0:16:24.46:0,24,501	0/0:19,0:18:46.66:0,47,520	1/1:20,2:21:6.46:50,6,0	0/1:15,1:14:5.41:138,0,5	0/0:10,0:10:17.63:0,18,439	1/1:22,0:18:43.73:313,44,0	1/1:28,0:28:8.47:440,8,0	0/1:5,2:6:83.29:83,0,158
chr10	10977778	.	CACACAA	C	3062.53	PASS	AB=0.811;AC=21;AF=0.375;AN=56;BaseQRankSum=1.526;DP=610;FS=1.542;HRun=0;HaplotypeScore=155.5935;InbreedingCoeff=0.6963;MQ=47.32;MQ0=54;MQRankSum=-3.019;QD=14.11;ReadPosRankSum=3.513;VQSLOD=3.1972;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:28:67.12:0,67,1310	1/1:9,1:10:9.02:144,9,0	0/0:53,0:4:5.87:0,6,36	0/0:45,0:3:8.84:0,9,59	0/0:28,0:28:62.98:0,63,1032	0/0:20,0:19:48.07:0,48,985	0/0:28,0:27:62.11:0,62,1086	0/0:15,0:14:26.59:0,27,232	0/0:22,0:22:33.06:0,33,952	1/1:16,1:15:44.56:419,45,0	1/1:3,12:13:0.47:1,0,0	0/0:18,0:16:28.55:0,29,537	0/0:18,0:16:43.74:0,44,660	0/0:22,0:21:46.87:0,47,719	1/1:3,14:17:14.95:244,15,0	0/1:4,18:21:67.72:579,0,68	1/1:23,1:23:50.37:530,50,0	1/1:19,1:17:17.06:154,17,0	0/0:21,0:20:50.67:0,51,670	0/0:22,0:21:39.40:0,39,458	0/0:20,0:15:23.98:0,24,373	0/0:19,0:18:45.37:0,45,439	1/1:9,13:21:6.48:63,6,0	0/1:13,2:13:5.88:144,0,6	0/0:9,1:10:17.69:0,18,364	1/1:21,0:17:47.64:397,48,0	1/1:4,23:27:9.18:489,9,0	0/1:7,0:6:96.43:96,0,120
chr10	10977780	.	CACAA	C	2289.92	PASS	AB=0.966;AC=21;AF=0.375;AN=56;BaseQRankSum=2.281;DP=608;FS=5.712;HRun=0;HaplotypeScore=145.3257;InbreedingCoeff=0.6184;MQ=47.12;MQ0=55;MQRankSum=-2.600;QD=9.58;ReadPosRankSum=1.570;VQSLOD=2.9017;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:29:69.63:0,70,1035	1/1:10,0:10:9.01:98,9,0	0/0:51,0:4:5.87:0,6,36	0/0:43,0:3:8.84:0,9,59	0/0:28,0:28:62.98:0,63,758	0/0:20,0:19:47.55:0,48,715	0/0:26,0:25:61.85:0,62,856	0/0:15,0:14:11.33:0,11,205	0/0:22,0:22:33.10:0,33,709	1/1:17,0:15:44.62:375,45,0	0/1:15,0:13:0:0,0,0	0/0:18,0:16:28.32:0,28,410	0/0:20,0:18:4.80:0,5,491	0/0:23,0:22:29.34:0,29,521	1/1:17,0:16:14.95:154,15,0	0/1:20,1:20:43.67:356,0,44	1/1:25,0:24:53.06:436,53,0	1/1:20,0:17:17.75:132,18,0	0/0:20,0:18:50.70:0,51,562	0/0:20,0:19:16.43:0,16,345	0/1:22,0:17:2.11:2,0,237	0/0:20,0:19:11.43:0,11,308	1/1:21,0:20:5.75:42,6,0	0/1:17,0:15:6.76:139,0,7	0/0:10,0:10:18:0,18,297	1/1:6,14:16:47.62:375,48,0	1/1:26,1:27:8.79:294,9,0	0/1:6,1:6:57.76:79,0,58
chr10	10977782	.	CAA	C	1881.44	PASS	AB=0.991;AC=23;AF=0.411;AN=56;BaseQRankSum=2.507;DP=605;FS=11.521;HRun=3;HaplotypeScore=134.5963;InbreedingCoeff=0.6005;MQ=47.11;MQ0=56;MQRankSum=-3.150;QD=7.21;ReadPosRankSum=0.993;VQSLOD=-0.5100;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:30:49.84:0,50,717	1/1:11,0:11:11.95:94,12,0	0/0:48,0:4:5.87:0,6,36	0/0:44,0:3:8.84:0,9,59	0/0:27,0:27:62.12:0,62,615	0/0:20,0:19:38.53:0,39,449	0/0:26,0:25:61.84:0,62,668	0/0:14,0:13:11.36:0,11,203	0/0:23,0:23:33.10:0,33,470	1/1:17,0:15:44.58:347,45,0	0/1:15,0:13:0:0,0,0	0/0:19,0:16:22.78:0,23,276	0/0:20,0:18:4.80:0,5,369	0/1:22,0:21:5.22:5,0,340	1/1:17,0:16:14.89:112,15,0	0/1:20,1:20:20.89:212,0,21	1/1:24,0:23:53:393,53,0	1/1:21,0:18:20.72:142,21,0	0/0:20,0:18:48.32:0,48,425	0/0:16,4:19:11.03:0,11,266	0/1:22,0:17:23.94:24,0,195	0/0:21,0:20:8.07:0,8,259	1/1:20,0:19:5.92:42,6,0	1/1:18,0:16:11.78:160,12,0	0/0:9,0:9:18.01:0,18,210	1/1:20,0:16:47.61:344,48,0	1/1:26,0:26:6.47:165,6,0	0/1:7,0:6:10.32:38,0,10
chr10	10977784	.	A	AACACAC	1638.53	PASS	AB=1.000;AC=24;AF=0.462;AN=52;BaseQRankSum=-7.223;DP=621;FS=3.406;HRun=0;HaplotypeScore=169.9204;InbreedingCoeff=0.3450;MQ=46.70;MQ0=60;MQRankSum=0.599;QD=5.10;ReadPosRankSum=-3.008;VQSLOD=2.2235;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:35,0:32:35.93:36,0,175	0/1:11,0:10:14.96:15,0,46	./.	./.	0/0:28,0:28:21.85:0,22,342	0/0:17,0:20:22.23:0,22,255	0/0:27,0:26:16.89:0,17,123	1/1:17,0:15:4.53:25,5,0	0/0:22,0:22:22.36:0,22,150	0/0:18,0:16:4.27:0,4,77	0/1:16,0:14:0:0,0,0	1/1:16,3:17:17.72:363,18,0	1/1:19,1:19:14.09:275,14,0	1/1:21,1:21:21:336,21,0	0/0:17,0:16:9.03:0,9,111	0/0:21,0:20:25.49:0,25,303	0/1:24,0:22:46.81:77,0,47	0/1:22,0:19:29.07:37,0,29	1/1:18,0:18:6.02:156,6,0	1/1:20,0:19:11.96:186,12,0	1/1:22,0:17:12.22:135,12,0	1/1:21,0:20:8.85:107,9,0	0/1:21,0:20:0:0,0,0	0/1:18,0:16:34.26:34,0,46	0/0:9,0:10:5.65:0,6,120	0/0:20,0:16:3.01:0,3,37	0/0:26,0:26:9.15:0,9,260	0/1:10,0:9:30.55:31,0,76
chr10	10977812	.	C	CAG	1712.72	PASS	AB=0.904;AC=9;AF=0.161;AN=56;BaseQRankSum=-2.518;DP=640;FS=0.485;HRun=0;HaplotypeScore=135.6481;InbreedingCoeff=0.1067;MQ=51.06;MQ0=41;MQRankSum=3.882;QD=8.00;ReadPosRankSum=3.300;VQSLOD=2.9892;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:37,5:39:37.46:637,0,37	0/0:9,0:8:14.98:0,15,127	0/1:19,0:5:1.73:2,0,43	0/0:21,0:8:14.18:0,14,169	0/0:26,0:26:50.76:0,51,516	0/1:20,4:23:2.43:418,0,2	0/1:9,26:34:34.76:259,0,35	0/0:20,0:18:53.72:0,54,434	1/1:4,26:30:5.12:486,5,0	0/0:25,0:23:59.75:0,60,507	0/0:14,0:13:8.88:0,9,67	0/0:22,0:18:0.85:0,1,89	0/1:24,0:22:13.35:13,0,205	0/1:20,0:18:23.58:24,0,155	0/0:16,0:15:17.98:0,18,154	0/0:16,0:16:19.87:0,20,303	0/0:28,0:26:56.53:0,57,429	0/0:25,0:22:37.34:0,37,261	0/0:16,0:16:8.64:0,9,222	0/1:20,0:18:0.48:0,0,147	0/0:36,0:29:59.23:0,59,434	0/0:24,0:23:31.93:0,32,265	0/0:23,0:22:17.38:0,17,139	0/0:25,0:22:22.86:0,23,262	0/0:18,0:18:35.81:0,36,339	0/0:22,0:21:56.69:0,57,449	0/0:28,0:28:41.95:0,42,355	0/0:12,0:11:23.32:0,23,163
chr10	10978578	.	TG	T	2993.07	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=11.417;DP=690;FS=0.434;HRun=2;HaplotypeScore=54.9987;InbreedingCoeff=0.9662;MQ=56.32;MQ0=17;MQRankSum=-0.841;QD=27.46;ReadPosRankSum=1.172;VQSLOD=3.3057;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,36:37:75.24:972,75,0	0/0:13,0:13:36.12:0,36,540	0/0:23,0:2:6.02:0,6,90	0/0:31,0:7:15.05:0,15,207	0/0:36,0:36:99:0,102,1482	1/1:0,23:23:57.19:740,57,0	1/1:2,22:23:57.19:740,57,0	0/0:28,0:27:78.20:0,78,1105	1/1:0,25:25:54.18:701,54,0	0/0:31,0:30:87.29:0,87,1279	0/0:18,0:18:54.18:0,54,809	0/0:26,0:25:75.25:0,75,1122	0/0:15,0:14:42.13:0,42,608	0/0:26,0:26:78.26:0,78,1165	0/0:37,0:37:99:0,111,1582	0/0:24,0:24:66.22:0,66,989	0/0:28,0:28:81.25:0,81,1188	0/0:38,0:38:99:0,108,1618	0/0:22,1:22:24.23:0,24,812	0/0:28,0:28:78.26:0,78,1167	0/0:30,0:30:90.26:0,90,1306	0/0:15,0:15:39.13:0,39,585	0/0:11,0:11:30.10:0,30,450	0/0:28,0:28:78.26:0,78,1165	0/0:20,0:20:60.20:0,60,898	0/0:22,0:22:60.18:0,60,861	0/0:20,0:19:54.17:0,54,789	0/0:10,0:10:27.09:0,27,405
chr10	10978774	.	AT	A	5016.44	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=11.644;DP=719;FS=2.609;HRun=1;HaplotypeScore=68.1936;InbreedingCoeff=0.9983;MQ=91.03;MQ0=0;MQRankSum=-5.918;QD=37.44;ReadPosRankSum=3.554;VQSLOD=5.4953;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,55:56:99:2165,146,0	0/0:7,0:7:21.07:0,21,328	0/0:34,0:34:99:0,102,1373	0/0:28,0:28:78.83:0,79,1138	0/0:32,0:32:93.28:0,93,1404	1/1:0,27:27:69.23:965,69,0	1/1:0,30:30:78.26:1090,78,0	0/0:27,0:27:81.27:0,81,1245	1/1:0,21:21:57.19:797,57,0	0/0:37,0:37:99:0,111,1685	0/0:19,0:19:57.19:0,57,891	0/0:27,0:27:81.28:0,81,1264	0/0:26,0:26:78.27:0,78,1219	0/0:17,0:17:51.17:0,51,798	0/0:33,0:33:99:0,99,1437	0/0:30,0:30:90.29:0,90,1385	0/0:34,0:34:99:0,102,1563	0/0:22,0:22:66.19:0,66,994	0/0:19,0:19:57.19:0,57,890	0/0:29,0:29:87.27:0,87,1311	0/0:19,0:19:57.18:0,57,866	0/0:30,0:30:90.28:0,90,1358	0/0:17,0:17:51.16:0,51,775	0/0:25,0:25:75.21:0,75,1141	0/0:15,0:15:45.14:0,45,683	0/0:25,0:25:75.22:0,75,1092	0/0:25,0:25:72.21:0,72,1077	0/0:8,0:8:24.08:0,24,375
chr10	10979801	.	AGGAGCCATGCCTTAGGAGGTGTGCAGGAG	A	9381.89	PASS	AC=42;AF=0.778;AN=54;BaseQRankSum=8.316;DP=586;FS=7.073;HRun=0;HaplotypeScore=365.9154;InbreedingCoeff=0.5349;MQ=71.94;MQ0=0;MQRankSum=-6.848;QD=21.77;ReadPosRankSum=3.881;VQSLOD=2.1529;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:25:3.01:71,3,0	1/1:5,3:8:3.48:223,3,0	0/0:16,0:16:3.01:0,3,82	0/0:22,0:20:15.05:0,15,690	1/1:31,0:31:15.05:804,15,0	1/1:12,5:17:3.01:222,3,0	1/1:25,0:25:3.01:56,3,0	0/0:26,0:26:21.07:0,21,973	1/1:15,10:25:10.95:885,11,0	1/1:12,0:11:3.01:84,3,0	1/1:11,0:11:3.01:51,3,0	1/1:21,12:33:12.04:889,12,0	1/1:10,9:19:6.02:444,6,0	1/1:9,9:18:2.59:221,3,0	1/1:13,10:22:12.04:889,12,0	1/1:13,19:32:29.34:2219,29,0	1/1:21,6:27:3.01:222,3,0	1/1:15,0:15:2.97:20,3,0	0/0:13,0:13:27.09:0,27,2701	0/0:7,0:7:6.02:0,6,438	0/0:59,0:59:99:0,114,10975	./.	1/1:8,0:8:3.01:74,3,0	1/1:14,9:23:6.02:442,6,0	1/1:24,0:24:12.04:811,12,0	1/1:18,12:30:21.65:461,22,0	1/1:11,0:11:3.01:73,3,0	1/1:8,5:13:3.01:222,3,0
chr10	10979808	.	ATGCCTTAGGAGGTGTGCAGGAGGGAGCCATG	A	6973.88	PASS	AB=0.990;AC=16;AF=0.286;AN=56;BaseQRankSum=11.255;DP=548;FS=6.345;HRun=0;HaplotypeScore=362.6857;InbreedingCoeff=-0.0680;MQ=67.47;MQ0=0;MQRankSum=-7.090;QD=23.80;ReadPosRankSum=5.719;VQSLOD=1.6310;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:23:55.96:0,56,1268	0/1:6,0:7:99:188,0,188	0/0:13,0:13:38.16:0,38,989	0/0:20,0:18:51.04:0,51,2129	1/1:0,30:30:30.10:1281,30,0	0/1:15,0:15:99:128,0,576	0/0:21,0:21:61.98:0,62,1134	0/0:29,0:29:87.29:0,87,4405	0/1:23,0:23:99:592,0,667	0/0:12,0:11:9.63:0,10,585	0/0:10,0:10:20.66:0,21,375	0/1:32,0:32:99:573,0,1144	0/1:17,0:17:99:293,0,456	0/1:17,0:17:99:133,0,451	0/1:22,0:21:99:601,0,608	0/1:30,0:30:99:1549,0,607	0/1:20,0:20:99:119,0,748	0/0:14,0:14:36.12:0,36,711	0/0:15,0:15:45.15:0,45,4246	0/0:9,0:9:24.08:0,24,1583	0/0:60,0:60:99:0,178,15176	0/0:10,0:10:27.09:0,27,547	0/0:8,0:8:10.95:0,11,412	0/1:19,0:19:99:290,0,440	1/1:0,20:20:12.04:1006,12,0	0/1:28,0:28:84.96:85,0,1068	0/0:10,0:10:14.94:0,15,475	0/1:13,0:13:99:134,0,421
chr10	10979829	.	AG	A	625.01	PASS	AB=0.870;AC=19;AF=0.339;AN=56;BaseQRankSum=9.886;DP=522;FS=0.000;HRun=3;HaplotypeScore=109.6864;InbreedingCoeff=-0.3183;MQ=60.83;MQ0=4;MQRankSum=-8.343;QD=2.03;ReadPosRankSum=4.604;VQSLOD=-0.4056;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:14,14:28:99:114,0,208	0/1:5,0:5:1.77:2,0,36	0/0:23,0:21:54.16:0,54,738	0/0:28,0:26:72.23:0,72,1006	0/1:30,0:30:29.50:30,0,79	0/0:10,0:10:4.15:0,4,58	0/1:7,8:13:13.59:14,0,121	0/0:24,0:23:63.21:0,63,905	0/1:16,0:16:8.72:9,0,62	0/1:10,5:13:79.94:80,0,253	0/0:6,2:8:6.48:0,6,62	0/1:23,0:23:12.30:12,0,131	0/1:12,1:12:3.49:3,0,71	0/1:15,0:15:2.12:2,0,15	0/1:19,0:18:10.08:10,0,81	0/1:28,1:28:25.52:26,0,123	0/0:15,0:15:7.18:0,7,115	0/1:6,4:10:83.98:84,0,228	0/0:25,0:25:75.23:0,75,1043	0/0:7,0:7:18.06:0,18,259	0/0:62,1:63:99:0,174,2462	0/1:4,6:10:68.88:88,0,69	0/1:10,2:11:54.21:54,0,88	0/1:16,0:16:1.66:2,0,30	1/1:20,0:20:8.88:28,9,0	0/1:21,1:21:99:133,0,295	0/1:5,5:9:86.76:87,0,162	0/0:11,0:11:10.22:0,10,168
chr10	10980058	.	CTCTGTGTG	C	4252.57	PASS	AB=1.000;AC=37;AF=0.661;AN=56;BaseQRankSum=-1.171;DP=429;FS=0.000;HRun=0;HaplotypeScore=106.4253;InbreedingCoeff=0.6223;MQ=49.32;MQ0=24;MQRankSum=0.499;QD=13.94;ReadPosRankSum=4.547;VQSLOD=3.2729;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:32,0:31:38.33:538,38,0	1/1:0,6:6:3.01:84,3,0	0/0:19,0:11:29.91:0,30,281	0/0:19,0:14:38.96:0,39,371	0/0:10,0:10:29.98:0,30,329	0/1:13,0:13:86.49:120,0,86	0/1:29,0:26:99:234,0,126	0/0:25,0:20:44.67:0,45,331	0/1:10,0:10:75.79:76,0,83	1/1:8,0:7:20.96:185,21,0	1/1:11,0:11:29.18:229,29,0	1/1:9,0:12:26.81:327,27,0	1/1:2,0:11:6.02:134,6,0	1/1:2,0:9:9.03:197,9,0	1/1:12,1:13:23.97:281,24,0	1/1:1,17:18:8.06:235,8,0	1/1:2,26:28:9.01:196,9,0	1/1:16,0:16:44.65:328,45,0	0/0:16,0:13:23.63:0,24,160	0/0:10,0:10:8.99:0,9,74	0/0:10,0:7:5.99:0,6,49	1/1:2,0:18:12.03:223,12,0	1/1:11,0:11:17.93:141,18,0	1/1:21,0:21:32.76:254,33,0	0/0:15,0:15:38.97:0,39,358	1/1:11,0:11:26.97:232,27,0	1/1:0,14:14:2.16:85,2,0	1/1:2,1:7:6.02:155,6,0
chr10	10980338	.	C	CCAT	5095.06	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=0.406;DP=584;FS=1.381;HRun=0;HaplotypeScore=112.5032;InbreedingCoeff=0.9745;MQ=59.46;MQ0=1;MQRankSum=-4.428;QD=26.96;ReadPosRankSum=-1.213;VQSLOD=4.8334;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:37:42.06:506,42,0	0/0:5,0:5:9.03:0,9,126	0/0:9,0:8:12.03:0,12,150	0/0:9,0:8:13.91:0,14,120	0/0:12,0:12:24.08:0,24,337	1/1:13,0:19:18.04:220,18,0	1/1:18,0:25:33.09:414,33,0	0/0:31,0:31:42.13:0,42,570	1/1:13,0:26:36.09:454,36,0	0/0:15,0:15:33.07:0,33,427	0/0:15,0:17:36.04:0,36,446	1/1:4,18:22:57.17:1106,57,0	1/1:3,16:19:48.16:954,48,0	1/1:4,15:21:39.13:780,39,0	0/0:29,0:29:60.09:0,60,817	0/0:28,0:28:54.18:0,54,757	0/0:27,0:27:63.19:0,63,867	0/0:17,0:17:36.12:0,36,506	0/0:18,0:18:36.10:0,36,473	0/0:16,0:16:30.10:0,30,422	0/0:46,0:46:96.24:0,96,1247	1/1:7,13:20:33.58:662,34,0	0/0:14,0:14:27.09:0,27,379	0/0:35,0:35:72.18:0,72,957	0/0:15,0:15:30.09:0,30,404	0/0:14,0:14:33.09:0,33,432	0/0:32,0:32:69.19:0,69,947	0/0:6,0:6:12.04:0,12,169
chr10	10980391	.	TCCCTCCCTTACTCTGACTCTACTACCCCCTCAACCC	T	3378.98	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=6.475;DP=559;FS=6.609;HRun=0;HaplotypeScore=487.9423;InbreedingCoeff=0.8437;MQ=76.72;MQ0=0;MQRankSum=-3.801;QD=52.80;ReadPosRankSum=1.043;VQSLOD=0.4305;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:23,4:27:14.83:778,15,0	0/0:3,0:3:6.02:0,6,565	0/0:15,0:14:3.17:0,3,1678	0/0:17,0:17:20.35:0,20,2204	0/0:11,0:11:33.11:0,33,3896	1/1:6,2:8:6.02:532,6,0	1/1:14,2:16:6.02:481,6,0	0/0:22,0:22:45.15:0,45,3171	1/1:7,6:13:18.06:1588,18,0	0/0:18,0:17:45.15:0,45,4777	0/0:17,0:17:39.10:0,39,3173	0/0:26,0:26:78.27:0,78,9297	0/0:24,0:24:65.31:0,65,7579	0/0:24,0:24:66.23:0,66,8171	0/0:31,0:31:84.27:0,84,10551	0/0:24,0:24:60.19:0,60,7681	0/0:30,0:30:81.28:0,81,11136	0/0:18,0:18:51.18:0,51,6360	0/0:25,0:25:72.10:0,72,5763	0/0:17,0:17:45.15:0,45,4959	0/0:34,0:34:87.28:0,87,11188	0/0:22,0:22:57.49:0,57,5216	0/0:12,0:12:33.11:0,33,3273	0/0:30,0:30:84.29:0,84,11491	0/0:18,0:18:54.18:0,54,7240	0/0:24,0:24:69.22:0,69,6230	0/0:29,0:29:81.28:0,81,9965	0/0:3,0:3:9.03:0,9,1032
chr10	10980821	.	GACCC	G	966.40	PASS	AB=0.975;AC=16;AF=0.286;AN=56;BaseQRankSum=10.697;DP=404;FS=30.560;HRun=0;HaplotypeScore=83.9236;InbreedingCoeff=-0.0999;MQ=50.16;MQ0=21;MQRankSum=-4.378;QD=4.47;ReadPosRankSum=10.441;VQSLOD=-0.6294;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:23,2:26:0.96:1,0,280	0/1:8,0:8:31.91:49,0,32	0/0:15,0:5:8.24:0,8,44	0/0:20,0:5:11.87:0,12,150	0/0:16,0:16:33:0,33,430	0/0:23,1:25:23.54:0,24,300	0/1:12,0:11:51.26:51,0,115	0/0:17,0:14:38.99:0,39,362	0/0:14,0:15:25.63:0,26,173	0/1:12,0:11:30.98:31,0,164	1/1:11,0:11:16.85:127,17,0	0/0:11,0:10:24.05:0,24,450	0/0:11,0:11:17.96:0,18,224	0/0:9,0:6:17.83:0,18,284	0/1:24,0:23:94.89:155,0,95	0/1:15,0:15:99:135,0,127	0/1:18,0:17:75.35:93,0,75	0/1:22,0:22:67.60:160,0,68	0/0:12,0:6:13.36:0,13,134	0/0:6,0:6:17.94:0,18,218	0/0:18,0:18:26.99:0,27,317	0/0:2,0:2:5.37:0,5,33	0/1:8,0:7:29.68:36,0,30	0/1:16,0:16:19.20:19,0,112	0/0:9,0:9:17.77:0,18,214	0/1:13,1:14:21.51:22,0,201	0/1:16,1:17:42.65:94,0,43	1/1:12,0:11:2.85:155,3,0
chr10	10981681	.	TGATA	T	11653.65	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=0.298;DP=631;FS=0.864;HRun=0;HaplotypeScore=120.4413;InbreedingCoeff=0.9816;MQ=74.26;MQ0=0;MQRankSum=-2.799;QD=30.83;ReadPosRankSum=5.104;VQSLOD=4.9515;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,34:43:75.14:1183,75,0	1/1:1,4:5:9.03:151,9,0	0/0:30,0:29:45.09:0,45,899	0/0:18,0:17:32.71:0,33,599	1/1:12,12:24:39.05:611,39,0	1/1:4,14:18:30.10:504,30,0	1/1:5,21:26:63.22:1058,63,0	0/0:16,0:34:78.24:0,78,1473	1/1:4,14:18:24.08:403,24,0	1/1:7,20:27:60.14:909,60,0	1/1:1,7:8:12.04:201,12,0	0/0:22,0:22:57.18:0,57,1286	0/0:27,0:27:57.20:0,57,1311	0/0:18,0:18:33.11:0,33,791	1/1:4,21:25:54.14:876,54,0	1/1:3,25:28:60.20:992,60,0	1/1:4,10:14:24.08:403,24,0	1/1:5,11:16:24.08:403,24,0	0/0:16,0:27:33.11:0,33,606	0/0:4,0:20:48.16:0,48,825	0/0:11,0:39:60.16:0,60,1001	0/0:18,0:18:33.07:0,33,736	1/1:4,9:13:18.06:302,18,0	1/1:10,23:33:57.19:957,57,0	1/1:4,7:11:21.07:339,21,0	1/1:2,26:28:72.22:1166,72,0	1/1:6,30:36:56.96:944,57,0	1/1:0,5:5:15.05:252,15,0
chr10	10981739	.	A	AAGGT	1054.13	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-4.335;DP=527;FS=7.193;HRun=0;HaplotypeScore=115.0183;InbreedingCoeff=0.9724;MQ=65.98;MQ0=0;MQRankSum=-0.901;QD=39.04;ReadPosRankSum=0.155;VQSLOD=3.7685;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:60.20:0,60,975	0/0:7,0:7:21.07:0,21,345	0/0:23,0:21:30.09:0,30,466	0/0:27,0:26:27.07:0,27,413	1/1:4,11:16:36.12:842,36,0	0/0:18,0:18:33.07:0,33,513	0/0:30,0:30:66.19:0,66,1031	0/0:18,0:19:30.08:0,30,425	0/0:12,0:12:24.08:0,24,395	0/0:26,0:26:51.17:0,51,836	0/0:12,0:12:30.05:0,30,440	0/0:15,0:15:39.13:0,39,637	0/0:23,0:23:60.20:0,60,982	0/0:20,0:20:51.16:0,51,814	0/0:21,0:21:51.17:0,51,816	0/0:17,0:17:27.09:0,27,444	0/0:17,0:17:36.10:0,36,564	0/0:13,0:13:27.04:0,27,409	0/0:15,0:15:15.05:0,15,236	0/0:11,0:11:24.07:0,24,370	0/0:29,0:29:57.16:0,57,886	0/0:16,0:16:45.14:0,45,713	0/0:8,0:8:18.05:0,18,274	0/0:28,0:28:45.11:0,45,688	1/1:4,5:11:15.05:330,15,0	0/0:21,0:21:40.02:0,40,643	0/0:27,0:27:54.18:0,54,884	0/0:9,0:9:27.09:0,27,444
chr10	10982651	.	GACA	G	1101.70	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.909;DP=683;FS=0.000;HRun=0;HaplotypeScore=95.4635;InbreedingCoeff=0.9842;MQ=91.98;MQ0=0;MQRankSum=-2.905;QD=28.25;ReadPosRankSum=1.138;VQSLOD=3.5787;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,120,2644	0/0:5,0:5:12.04:0,12,251	0/0:25,0:25:60.17:0,60,1160	0/0:33,0:33:84.20:0,84,1591	1/1:2,16:18:36.12:588,36,0	0/0:24,0:24:66.23:0,66,1465	0/0:28,0:28:84.29:0,84,1857	0/0:28,0:28:75.26:0,75,1638	0/0:25,0:25:69.22:0,69,1496	0/0:26,0:26:72.24:0,72,1560	0/0:18,0:18:54.19:0,54,1204	0/0:26,0:26:75.24:0,75,1632	0/0:33,0:33:96.33:0,96,2145	0/0:21,0:21:63.20:0,63,1363	0/0:31,0:31:90.31:0,90,2005	0/0:18,0:18:51.18:0,51,1140	0/0:25,0:25:75.26:0,75,1674	0/0:32,0:32:84.29:0,84,1873	0/0:23,0:23:69.24:0,69,1535	0/0:17,0:17:51.13:0,51,1077	0/0:38,0:38:99:0,111,2478	0/0:18,0:18:51.18:0,51,1131	0/0:25,0:25:72.23:0,72,1535	0/0:38,0:38:99:0,102,2219	1/1:2,19:21:39.13:635,39,0	0/0:19,0:19:57.20:0,57,1273	0/0:13,0:13:39.13:0,39,870	0/0:12,0:12:36.12:0,36,804
chr10	10983155	.	TC	T	4462.52	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=17.593;DP=602;FS=16.087;HRun=3;HaplotypeScore=263.4415;InbreedingCoeff=0.9664;MQ=53.60;MQ0=0;MQRankSum=-16.473;QD=11.90;ReadPosRankSum=5.962;VQSLOD=1.2726;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:35,1:36:54.76:341,55,0	1/1:6,0:6:8.94:66,9,0	0/0:22,0:14:15.36:0,15,440	0/0:31,0:29:72.88:0,73,1001	0/0:28,0:28:84.28:0,84,1203	1/1:23,0:23:38.66:267,39,0	1/1:19,2:21:26.74:181,27,0	0/0:27,0:27:81.26:0,81,1133	1/1:25,0:25:52.46:355,52,0	1/1:23,0:23:32.14:195,32,0	1/1:15,0:15:35.80:287,36,0	1/1:17,2:19:41.65:298,42,0	1/1:17,0:17:26.76:186,27,0	1/1:16,0:16:35.20:239,35,0	1/1:24,0:24:47.59:332,48,0	1/1:23,6:29:44.56:307,45,0	1/1:16,0:16:20.82:146,21,0	1/1:11,1:12:17.66:118,18,0	0/0:22,0:22:57.18:0,57,803	0/0:26,0:26:75.23:0,75,1042	0/0:47,0:47:99:0,135,1883	1/1:21,0:21:32.73:232,33,0	1/1:14,1:15:26.65:184,27,0	1/1:11,0:11:20.55:151,21,0	0/0:23,0:23:66.20:0,66,915	1/1:25,0:25:53.19:346,53,0	1/1:16,0:16:26.76:190,27,0	1/1:5,0:5:5.95:42,6,0
chr10	10983157	.	C	CTCA	15016.28	PASS	AB=0.500;AC=39;AF=0.696;AN=56;BaseQRankSum=17.016;DP=457;FS=14.805;HRun=0;HaplotypeScore=213.3158;InbreedingCoeff=0.9177;MQ=59.90;MQ0=0;MQRankSum=-16.647;QD=65.01;ReadPosRankSum=7.310;VQSLOD=2.8414;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,19:20:54.95:1137,55,0	1/1:0,3:3:9.03:210,9,0	0/0:23,0:15:42.07:0,42,665	0/0:30,0:27:77.54:0,78,1303	0/0:28,0:28:84.29:0,84,1563	1/1:1,12:13:39.13:889,39,0	1/1:2,9:11:27.09:632,27,0	0/0:28,0:28:84.27:0,84,1437	1/1:1,17:18:54.19:1230,54,0	1/1:1,10:11:33.11:778,33,0	1/1:0,12:12:36.12:837,36,0	1/1:2,12:14:42.14:990,42,0	1/1:1,9:10:27.09:632,27,0	1/1:1,11:12:36.12:848,36,0	1/1:1,15:16:48.16:1101,48,0	1/1:6,14:20:45.15:1061,45,0	1/1:1,7:8:20.56:445,21,0	1/1:1,5:6:18.06:424,18,0	0/0:21,0:21:63.17:0,63,1064	0/0:25,0:25:75.23:0,75,1319	0/0:47,0:47:99:0,138,2442	1/1:0,11:11:33.11:773,33,0	1/1:1,8:9:27.09:630,27,0	0/1:0,8:8:2.30:396,0,2	0/0:24,0:24:66.20:0,66,1168	1/1:1,16:18:54.19:1270,54,0	1/1:1,8:9:27.08:588,27,0	1/1:0,2:2:6.02:144,6,0
chr10	10983163	.	T	TAACTAAC	24577.70	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=17.357;DP=439;FS=15.194;HRun=0;HaplotypeScore=206.2420;InbreedingCoeff=0.9732;MQ=62.54;MQ0=0;MQRankSum=-17.114;QD=109.23;ReadPosRankSum=9.015;VQSLOD=3.8706;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,19:20:60.04:2201,60,0	1/1:1,3:4:12.04:397,12,0	0/0:19,0:13:33.10:0,33,854	0/0:28,0:26:74.71:0,75,1755	0/0:26,0:26:78.25:0,78,2085	1/1:0,12:12:36.12:1415,36,0	1/1:3,9:12:30.07:1085,30,0	0/0:24,0:24:69.22:0,69,1747	1/1:1,17:18:51.17:1976,51,0	1/1:0,10:10:30.10:1172,30,0	1/1:0,12:12:36.12:1316,36,0	1/1:2,12:15:41.93:1540,42,0	1/1:0,8:9:27.09:1058,27,0	1/1:2,11:14:39.13:1473,39,0	1/1:1,15:16:45.15:1769,45,0	1/1:1,14:15:45.15:1692,45,0	1/1:0,7:7:18.06:710,18,0	1/1:1,5:6:18.06:623,18,0	0/0:24,0:24:69.24:0,69,1889	0/0:25,0:25:72.23:0,72,1935	0/0:44,0:44:99:0,129,3456	1/1:0,11:11:33.11:1297,33,0	1/1:1,7:9:27.09:962,27,0	1/1:0,8:8:20.87:719,21,0	0/0:24,0:24:66.23:0,66,1802	1/1:0,17:17:51.18:2001,51,0	1/1:0,8:8:24.08:946,24,0	1/1:0,1:2:6.02:225,6,0
chr10	10985531	.	G	GTACA	5865.01	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-13.720;DP=724;FS=5.676;HRun=0;HaplotypeScore=176.0608;InbreedingCoeff=0.9996;MQ=89.69;MQ0=0;MQRankSum=-4.391;QD=59.24;ReadPosRankSum=-0.985;VQSLOD=5.4947;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,132,2348	0/0:14,0:14:39.11:0,39,694	0/0:30,0:31:84.25:0,84,1422	0/0:25,0:25:72.24:0,72,1256	0/0:24,0:24:63.22:0,63,1165	0/0:23,0:23:66.21:0,66,1180	0/0:32,0:32:63.22:0,63,1176	1/1:5,11:16:45.15:1097,45,0	0/0:25,0:25:66.19:0,66,1160	0/0:28,0:28:84.29:0,84,1555	0/0:12,0:12:30.10:0,30,560	0/0:33,0:33:93.32:0,93,1734	0/0:25,0:25:72.25:0,72,1337	0/0:25,0:25:69.22:0,69,1257	0/0:24,0:24:63.22:0,63,1168	0/0:32,0:32:87.26:0,87,1559	0/0:40,0:40:96.31:0,96,1723	0/0:14,0:14:36.12:0,36,672	1/1:3,11:15:39.11:950,39,0	1/1:2,22:25:51.17:1358,51,0	1/1:2,41:43:92.89:2460,93,0	0/0:20,0:20:54.19:0,54,1000	0/0:23,0:23:59.96:0,60,1082	0/0:38,0:38:99:0,105,1812	0/0:28,0:28:81.28:0,81,1512	0/0:24,0:24:63.20:0,63,1139	0/0:27,0:27:75.26:0,75,1394	0/0:10,0:10:30.10:0,30,553
chr10	10985544	.	G	GC	20984.87	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-16.159;DP=731;FS=4.919;HRun=3;HaplotypeScore=80.2118;InbreedingCoeff=0.9991;MQ=90.69;MQ0=0;MQRankSum=-6.370;QD=36.31;ReadPosRankSum=4.796;VQSLOD=5.3462;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,42:44:99:1680,120,0	1/1:1,11:12:30.10:420,30,0	0/0:29,0:29:78.20:0,78,897	0/0:28,0:28:60.01:0,60,788	1/1:2,21:23:51.13:692,51,0	1/1:1,21:22:60.20:840,60,0	1/1:4,28:32:66.22:924,66,0	0/0:17,0:17:51.16:0,51,611	1/1:2,24:26:63.21:878,63,0	1/1:3,29:32:93.26:1246,93,0	1/1:1,10:11:27.09:376,27,0	1/1:1,38:39:99:1509,108,0	1/1:1,25:26:72.24:1006,72,0	1/1:1,26:27:72.24:1008,72,0	1/1:2,25:27:66.22:924,66,0	1/1:1,35:36:93.31:1302,93,0	1/1:2,36:38:93.31:1302,93,0	1/1:2,10:12:27.09:378,27,0	0/0:11,0:11:27.08:0,27,324	0/0:29,0:29:69.18:0,69,802	0/0:39,0:39:96.29:0,96,1152	1/1:0,21:21:60.20:839,60,0	1/1:0,23:23:60.20:839,60,0	1/1:1,35:36:99:1386,99,0	1/1:0,30:30:87.29:1218,87,0	1/1:1,24:25:75.19:999,75,0	1/1:3,22:25:60.20:840,60,0	1/1:1,9:10:27.09:378,27,0
chr10	10986689	.	CACATT	C	17956.10	PASS	AB=0.526;AC=31;AF=0.554;AN=56;BaseQRankSum=12.585;DP=718;FS=0.308;HRun=0;HaplotypeScore=167.0769;InbreedingCoeff=0.9285;MQ=81.24;MQ0=0;MQRankSum=-14.838;QD=47.38;ReadPosRankSum=5.085;VQSLOD=4.7169;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,99,3007	1/1:5,10:15:21.07:435,21,0	0/0:27,0:27:54.91:0,55,1929	0/0:23,0:22:57.19:0,57,1548	0/0:40,0:40:99:0,105,3228	0/0:24,0:24:69.22:0,69,2043	0/0:18,0:18:51.18:0,51,1546	0/0:34,0:34:96.31:0,96,2721	0/0:24,0:24:69.24:0,69,2074	1/1:3,37:40:99:2201,111,0	1/1:2,25:27:63.17:1235,63,0	1/1:2,22:24:54.15:1051,54,0	1/1:5,21:26:54.19:1118,54,0	1/1:1,24:25:63.22:1305,63,0	1/1:1,27:28:69.24:1404,69,0	0/1:3,27:29:16.66:1351,0,17	1/1:3,16:19:45.15:932,45,0	1/1:3,12:15:33.11:684,33,0	0/0:26,0:26:72.25:0,72,2202	0/0:28,0:28:84.29:0,84,2510	0/0:29,0:29:78.27:0,78,2351	1/1:7,16:23:39.09:766,39,0	1/1:3,24:27:69.24:1402,69,0	1/1:1,14:15:33.11:684,33,0	0/0:27,0:27:75.23:0,75,2177	1/1:5,23:28:69.24:1399,69,0	1/1:2,24:26:69.24:1429,69,0	1/1:1,9:10:27.09:559,27,0
chr10	10987424	.	T	TTGTGTGTGTGTGTG	8168.05	PASS	AB=1.000;AC=47;AF=0.979;AN=48;BaseQRankSum=-2.351;DP=520;FS=3.010;HRun=0;HaplotypeScore=192.8663;InbreedingCoeff=-0.0936;MQ=45.12;MQ0=14;MQRankSum=0.148;QD=17.91;ReadPosRankSum=1.332;VQSLOD=4.0621;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:24:6.02:274,6,0	./.	./.	./.	1/1:19,0:18:5.93:265,6,0	1/1:23,0:22:6.52:137,7,0	0/1:22,0:21:0.02:86,0,0	1/1:32,0:29:11.53:345,12,0	1/1:16,0:14:6.02:256,6,0	1/1:19,0:17:12.04:520,12,0	./.	1/1:22,0:22:15.05:599,15,0	1/1:15,0:15:8.96:214,9,0	1/1:15,0:14:3.01:176,3,0	1/1:25,0:24:2.99:24,3,0	1/1:13,0:13:12.04:559,12,0	1/1:18,0:20:21.05:1054,21,0	1/1:13,0:13:9.03:482,9,0	1/1:20,0:16:11.96:274,12,0	1/1:21,0:19:6.02:161,6,0	1/1:14,0:13:5.52:165,6,0	1/1:12,1:18:6.02:386,6,0	1/1:11,0:10:2.92:69,3,0	1/1:15,0:14:4.55:28,5,0	1/1:19,0:15:3.01:178,3,0	1/1:25,0:21:27.09:1008,27,0	1/1:22,0:22:12.04:591,12,0	1/1:13,0:12:9.03:316,9,0
chr10	10988880	.	GA	G	1195.69	PASS	AB=0.758;AC=43;AF=0.827;AN=52;BaseQRankSum=2.503;DP=390;FS=1.045;HRun=13;HaplotypeScore=58.9322;InbreedingCoeff=0.2573;MQ=34.23;MQ0=23;MQRankSum=-3.825;QD=3.87;ReadPosRankSum=2.003;VQSLOD=0.1731;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,8:12:3.41:23,3,0	1/1:3,1:4:4.98:27,5,0	./.	./.	1/1:8,9:17:2.88:22,3,0	1/1:2,4:6:8.92:63,9,0	1/1:6,7:12:14.89:109,15,0	0/0:22,0:23:33.39:0,33,332	1/1:7,3:9:1.73:37,2,0	0/1:8,3:9:17.32:49,0,17	1/1:13,4:16:8.88:65,9,0	1/1:6,3:8:5.95:44,6,0	1/1:1,4:5:2.04:6,2,0	1/1:5,3:8:5.84:43,6,0	1/1:4,7:10:5.93:43,6,0	1/1:4,5:9:11.86:82,12,0	1/1:12,5:13:24.77:188,25,0	0/1:12,5:13:15.49:15,0,16	0/0:16,0:14:11.93:0,12,99	0/0:15,0:14:3.13:0,3,65	1/1:5,1:5:2.85:22,3,0	1/1:8,5:13:5.94:44,6,0	1/1:11,7:18:11.87:85,12,0	1/1:14,6:19:5.68:44,6,0	1/1:15,9:25:9.30:127,9,0	1/1:8,6:14:20.70:153,21,0	0/1:18,12:27:25.78:26,0,89	1/1:8,1:8:2.94:22,3,0
chr10	10988901	.	A	AG	657.99	PASS	AB=0.979;AC=18;AF=0.321;AN=56;BaseQRankSum=0.585;DP=524;FS=33.600;HRun=0;HaplotypeScore=77.4019;InbreedingCoeff=-0.0038;MQ=39.02;MQ0=33;MQRankSum=-0.524;QD=2.33;ReadPosRankSum=-1.006;VQSLOD=0.7735;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,1:18:20.15:0,20,185	0/1:5,0:5:17.55:18,0,35	0/0:28,0:4:5.25:0,5,79	0/1:38,0:4:2.33:4,0,2	0/0:27,0:26:39.94:0,40,207	0/1:11,1:12:6.23:6,0,104	0/1:13,1:14:26.74:27,0,92	0/0:32,0:28:50.80:0,51,400	0/0:8,0:7:11.86:0,12,85	1/1:18,1:17:1.46:105,1,0	0/1:21,0:19:39.36:64,0,39	0/0:10,0:9:12.52:0,13,69	0/0:10,0:9:17.57:0,18,113	0/0:13,0:13:24.20:0,24,189	0/1:16,0:15:31.26:43,0,31	0/1:14,0:12:19.62:73,0,20	0/1:23,0:18:25.99:86,0,26	0/1:18,1:16:43.56:44,0,52	0/0:23,0:21:27.17:0,27,308	0/0:19,0:17:25.06:0,25,194	0/0:4,0:3:5.92:0,6,39	0/0:12,0:12:19.85:0,20,128	1/1:13,0:13:18.80:84,19,0	0/1:22,0:19:19.08:19,0,23	0/0:37,0:34:36.43:0,36,194	1/1:18,1:19:22.98:212,23,0	0/1:29,0:25:20.72:21,0,87	0/1:17,1:16:18.35:18,0,91
chr10	10988904	.	A	AAG	523.18	PASS	AB=0.951;AC=9;AF=0.161;AN=56;BaseQRankSum=-1.528;DP=534;FS=1.958;HRun=0;HaplotypeScore=86.2941;InbreedingCoeff=0.1110;MQ=40.85;MQ0=38;MQRankSum=-0.357;QD=2.77;ReadPosRankSum=-0.802;VQSLOD=2.0913;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:18:41.60:0,42,355	0/0:5,0:5:8.11:0,8,53	0/0:31,0:4:5.20:0,5,89	0/0:44,0:6:1.61:0,2,13	0/1:13,12:26:1.03:284,0,1	0/0:13,0:13:27.76:0,28,236	0/0:12,0:12:23.56:0,24,185	0/0:32,0:28:52.89:0,53,424	0/0:8,0:7:11.29:0,11,71	0/0:18,0:16:1.33:0,1,119	0/1:20,0:18:1.04:1,0,99	0/0:9,0:8:16.95:0,17,133	0/0:10,0:9:18.02:0,18,180	0/0:14,0:14:25.65:0,26,225	0/1:15,0:15:1.33:1,0,72	0/0:14,0:12:22.36:0,22,152	0/0:24,0:19:11.77:0,12,150	0/1:19,0:16:9.57:10,0,128	0/0:22,0:20:50.78:0,51,414	0/0:19,0:17:25.18:0,25,219	0/0:3,0:2:5.94:0,6,41	0/0:14,0:14:23.37:0,23,169	0/0:14,0:14:19.67:0,20,97	0/1:24,0:21:0.45:0,0,91	1/1:16,14:34:4.73:295,5,0	0/0:20,0:20:16.17:0,16,197	0/1:29,0:24:14.04:14,0,202	0/1:18,0:16:34.06:34,0,138
chr10	10989987	.	GGCAGGCAGGCAGGCAGGCAC	G	2678.40	PASS	AB=1.000;AC=25;AF=0.543;AN=46;BaseQRankSum=5.591;DP=337;FS=0.000;HRun=0;HaplotypeScore=131.9844;InbreedingCoeff=0.4068;MQ=59.44;MQ0=22;MQRankSum=-5.279;QD=21.43;ReadPosRankSum=4.023;VQSLOD=1.5238;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:14.94:0,15,139	1/1:4,0:4:6.02:294,6,0	0/0:31,0:11:27.09:0,27,1006	0/0:28,0:16:36.12:0,36,931	1/1:3,0:3:0.47:1,0,0	0/0:11,0:11:2.97:0,3,20	0/1:24,0:23:55.18:172,0,55	0/0:22,0:16:36.12:0,36,1689	0/1:12,0:12:99:124,0,108	1/1:4,0:4:3.01:149,3,0	./.	1/1:8,10:18:6.49:238,6,0	1/1:6,0:6:3.01:164,3,0	0/1:16,0:16:81.63:299,0,82	./.	1/1:7,0:7:6.02:220,6,0	./.	1/1:5,0:5:3.01:132,3,0	0/0:12,0:11:27.09:0,27,999	0/0:5,0:3:3.01:0,3,176	0/0:40,0:36:64.21:0,64,2583	./.	0/0:3,0:3:1.18:0,1,2	1/1:15,0:14:0.47:1,0,0	./.	1/1:4,0:4:6.02:204,6,0	1/1:6,0:6:15.05:678,15,0	1/1:1,0:1:3.01:153,3,0
chr10	10989988	.	GCAGGCAGGCAGGCAGGCACGCACA	G	2843.36	PASS	AB=0.871;AC=24;AF=0.522;AN=46;BaseQRankSum=5.598;DP=329;FS=0.000;HRun=0;HaplotypeScore=141.7153;InbreedingCoeff=0.3178;MQ=59.18;MQ0=26;MQRankSum=-5.226;QD=23.31;ReadPosRankSum=4.075;VQSLOD=1.9706;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:14.94:0,15,139	1/1:0,4:4:6.02:331,6,0	0/0:32,0:11:27.56:0,28,1001	0/0:30,0:16:36.12:0,36,931	1/1:3,0:3:0.47:1,0,0	0/0:11,0:11:2.97:0,3,20	0/1:23,0:22:55.18:172,0,55	0/0:22,0:15:36.12:0,36,1689	0/1:11,0:11:99:124,0,108	1/1:4,0:4:3.01:149,3,0	./.	1/1:18,0:18:6.02:274,6,0	1/1:2,0:6:3.01:166,3,0	0/1:5,0:14:81.63:302,0,82	./.	1/1:6,1:7:6.02:220,6,0	./.	1/1:5,0:5:3.01:169,3,0	0/0:11,0:10:27.09:0,27,999	0/0:6,0:4:3.01:0,3,176	0/0:38,0:34:64.21:0,64,2606	./.	0/0:2,1:3:0.81:0,1,2	1/1:15,0:14:0.47:1,0,0	./.	1/1:4,0:4:6.02:204,6,0	0/1:6,1:7:51.49:688,0,51	1/1:1,0:1:3.01:190,3,0
chr10	10989990	.	AGGCAGGCAGGCAGG	A	2046.38	PASS	AB=0.827;AC=23;AF=0.479;AN=48;BaseQRankSum=5.597;DP=299;FS=0.000;HRun=0;HaplotypeScore=92.2913;InbreedingCoeff=0.4117;MQ=57.84;MQ0=32;MQRankSum=-5.081;QD=20.06;ReadPosRankSum=3.628;VQSLOD=1.6212;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:14.94:0,15,139	1/1:4,0:4:6.02:236,6,0	0/0:32,0:10:27.56:0,28,940	0/0:28,0:13:36.12:0,36,866	0/1:0,2:2:0:0,0,0	0/0:11,0:11:2.97:0,3,20	0/1:23,0:21:94.90:95,0,106	0/0:20,0:13:36.12:0,36,1517	0/1:10,0:10:78.48:78,0,118	1/1:2,1:3:2.79:140,3,0	./.	1/1:11,0:11:6.49:179,6,0	1/1:4,0:4:3.01:102,3,0	0/1:11,0:11:85.44:217,0,85	./.	1/1:2,4:6:6.02:184,6,0	./.	1/1:2,2:4:3.01:69,3,0	0/0:11,0:10:27.09:0,27,942	0/0:5,0:3:3.01:0,3,158	0/0:35,0:32:67.20:0,67,2423	0/1:3,4:6:0:0,0,0	0/0:5,0:5:1.73:0,2,5	0/0:6,7:13:1.45:0,1,4	./.	1/1:7,1:8:23.45:258,23,0	1/1:2,4:6:11.95:540,12,0	1/1:2,0:1:3.01:101,3,0
chr10	10989992	.	GCAGGCAGGCAGGCACGCA	G	2452.81	PASS	AB=0.975;AC=24;AF=0.545;AN=44;BaseQRankSum=4.470;DP=300;FS=0.803;HRun=0;HaplotypeScore=97.0414;InbreedingCoeff=0.4635;MQ=52.25;MQ0=44;MQRankSum=-4.222;QD=23.58;ReadPosRankSum=1.495;VQSLOD=2.1147;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:8,0:8:1.05:11,0,1	1/1:4,0:4:6.02:226,6,0	0/0:36,0:8:21.05:0,21,692	0/0:29,0:11:17.29:0,17,458	0/1:2,0:2:0:0,0,0	./.	1/1:22,0:20:20.82:398,21,0	0/0:20,0:12:33.10:0,33,1075	1/1:9,1:10:9.03:246,9,0	1/1:3,0:3:5.77:126,6,0	./.	1/1:10,0:11:6.49:172,6,0	1/1:4,0:4:3.01:131,3,0	0/1:11,0:11:48.03:232,0,48	./.	1/1:6,0:6:6.02:149,6,0	./.	1/1:4,0:4:3.01:102,3,0	0/0:11,0:9:27.07:0,27,596	0/0:5,0:3:3.01:0,3,126	0/0:36,0:32:57.57:0,58,1642	./.	0/0:4,0:4:0.48:0,0,1	0/0:12,0:11:0.77:0,1,3	./.	1/1:8,0:8:22.52:207,23,0	0/1:6,0:6:14.81:475,0,15	1/1:4,0:2:3.01:126,3,0
chr10	10989994	.	AGGCAGGCAGG	A	1587.73	PASS	AB=0.961;AC=23;AF=0.500;AN=46;BaseQRankSum=4.725;DP=300;FS=0.877;HRun=0;HaplotypeScore=75.6629;InbreedingCoeff=0.3432;MQ=49.29;MQ0=52;MQRankSum=-4.392;QD=15.12;ReadPosRankSum=3.345;VQSLOD=1.0569;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:5,3:7:0:0,0,0	1/1:4,0:4:6.02:179,6,0	0/0:39,0:7:21.07:0,21,627	0/0:32,0:11:23.85:0,24,503	0/1:2,0:2:0:0,0,0	./.	1/1:11,6:15:12.57:303,13,0	0/0:19,0:11:33.10:0,33,949	1/1:3,5:8:9.03:204,9,0	0/1:3,0:3:11.61:82,0,12	./.	1/1:12,0:12:3.18:101,3,0	1/1:5,0:5:3.01:70,3,0	0/1:11,0:11:48.70:154,0,49	./.	0/1:7,0:7:13.69:104,0,14	./.	1/1:4,0:4:2.84:14,3,0	0/0:12,0:9:27.07:0,27,624	0/0:5,0:3:3.01:0,3,109	0/0:34,0:30:58.88:0,59,1564	0/1:6,0:5:0:0,0,0	0/0:3,1:4:0.56:0,1,2	0/0:14,0:14:4.58:0,5,13	./.	0/1:8,0:8:42.88:77,0,43	1/1:6,0:6:17.79:373,18,0	1/1:4,0:2:3.01:70,3,0
chr10	10990006	.	ACG	A	756.90	PASS	AB=1.000;AC=36;AF=0.818;AN=44;BaseQRankSum=1.320;DP=282;FS=2.056;HRun=0;HaplotypeScore=56.9280;InbreedingCoeff=0.3002;MQ=34.41;MQ0=63;MQRankSum=-1.034;QD=3.98;ReadPosRankSum=2.147;VQSLOD=1.9673;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:8:2.90:16,3,0	1/1:4,0:4:5.88:36,6,0	0/0:36,0:4:5.82:0,6,35	0/1:23,0:4:1.08:1,0,25	0/1:2,0:2:0:0,0,0	./.	1/1:15,0:12:11.01:58,11,0	1/1:9,5:5:12.88:106,13,0	1/1:7,0:6:2.37:8,2,0	1/1:6,0:5:8.74:52,9,0	./.	1/1:12,0:12:3.63:12,4,0	1/1:6,0:6:2.90:16,3,0	1/1:13,1:12:5.69:32,6,0	./.	1/1:6,0:6:5.71:33,6,0	./.	1/1:4,0:4:2.80:13,3,0	1/1:2,5:4:11.80:84,12,0	1/1:7,0:3:3:25,3,0	1/1:27,0:21:23.71:194,24,0	./.	0/1:4,0:4:0:0,0,0	0/0:16,0:14:0.94:0,1,2	./.	1/1:8,0:8:19.93:102,20,0	0/1:9,0:9:2.82:56,0,3	1/1:4,0:2:2.84:14,3,0
chr10	10990059	.	CAGAGAGAGAG	C	519.31	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-1.677;DP=459;FS=10.224;HRun=0;HaplotypeScore=108.7389;InbreedingCoeff=0.5649;MQ=37.65;MQ0=45;MQRankSum=1.336;QD=6.04;ReadPosRankSum=-1.165;VQSLOD=1.2604;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,14:32:0:0,0,1	0/0:8,0:6:8.95:0,9,271	0/0:1,0:1:3.01:0,3,112	0/0:1,0:1:3.01:0,3,147	0/0:16,0:14:30.10:0,30,1206	1/1:15,0:15:17.76:537,18,0	1/1:13,7:17:0.81:2,1,0	0/0:20,0:20:29.54:0,30,840	1/1:5,13:17:3.01:85,3,0	0/0:18,0:16:27.09:0,27,1028	0/0:15,0:12:6.02:0,6,263	0/0:18,0:16:18.06:0,18,714	0/0:17,0:16:22.32:0,22,819	0/0:28,0:24:23.76:0,24,840	0/0:18,0:17:6.02:0,6,246	0/0:16,0:14:12.51:0,13,403	0/0:18,0:12:13.29:0,13,400	0/0:9,0:8:15.05:0,15,464	0/0:13,0:11:18:0,18,267	0/0:8,0:5:0:0,0,0	1/1:22,0:26:0.37:1,0,0	0/0:20,0:18:18.06:0,18,739	0/0:19,0:17:12.04:0,12,502	0/0:17,0:12:12.04:0,12,495	0/0:2,0:7:0:0,0,0	0/0:17,0:15:42.14:0,42,1414	0/0:18,0:15:14.96:0,15,481	0/0:12,0:8:9.03:0,9,197
chr10	10990144	.	GAGGGCCAAGTCAAAGTTTCAGAAGGGACTCTGGCCAGCCC	G	17047.27	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=12.494;DP=545;FS=26.476;HRun=0;HaplotypeScore=479.9693;InbreedingCoeff=0.9202;MQ=80.58;MQ0=0;MQRankSum=-10.469;QD=90.68;ReadPosRankSum=6.921;VQSLOD=1.3461;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:81.28:0,81,13132	1/1:5,12:17:15.05:1542,15,0	0/0:21,0:22:60.18:0,60,2780	0/0:21,0:21:60.21:0,60,3638	0/0:16,0:16:45.15:0,45,6111	0/0:18,0:18:54.19:0,54,6761	0/0:18,0:18:51.18:0,51,6197	0/0:33,0:33:93.32:0,93,7633	0/0:23,0:23:51.18:0,51,7709	1/1:9,9:18:20.97:1907,21,0	1/1:5,6:11:5.72:65,6,0	0/0:29,0:29:81.26:0,81,11908	0/0:11,0:11:33.11:0,33,4737	0/0:29,0:29:84.27:0,84,13256	1/1:7,11:18:21.07:2031,21,0	1/1:4,16:20:24.08:2477,24,0	1/1:5,9:14:3.01:310,3,0	1/1:5,5:10:3.01:309,3,0	0/0:16,0:16:48.15:0,48,4908	0/0:17,0:17:48.16:0,48,7792	0/0:36,0:35:99:0,102,13875	0/0:20,0:20:54.19:0,54,7681	1/1:3,13:16:18.06:1572,18,0	1/1:5,4:8:9.03:726,9,0	0/0:16,0:16:42.14:0,42,6791	1/1:7,13:20:21.04:1880,21,0	1/1:7,15:22:27.09:2373,27,0	1/1:4,9:13:18.06:1856,18,0
chr10	10990838	.	A	AAGGAGTGC	2254.68	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-0.390;DP=815;FS=0.000;HRun=0;HaplotypeScore=204.3631;InbreedingCoeff=0.9987;MQ=88.89;MQ0=0;MQRankSum=-7.561;QD=59.33;ReadPosRankSum=-2.347;VQSLOD=3.0774;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,102,2718	0/0:12,0:12:33.11:0,33,883	0/0:28,0:28:72.14:0,72,1670	0/0:34,0:34:84.72:0,85,2142	1/1:9,8:18:24.08:969,24,0	0/0:22,0:22:57.20:0,57,1582	0/0:38,0:38:99:0,105,2663	0/0:23,0:23:57.20:0,57,1562	0/0:23,0:23:69.23:0,69,1810	0/0:26,0:25:78.27:0,78,2171	0/0:22,0:22:45.15:0,45,1179	0/0:32,0:32:93.30:0,93,2494	0/0:26,0:26:75.24:0,75,2037	0/0:47,0:47:99:0,132,3579	0/0:38,0:37:99:0,114,3017	0/0:20,0:20:57.20:0,57,1568	0/0:45,0:45:99:0,132,3570	0/0:31,0:31:90.31:0,90,2517	0/0:20,0:20:57.19:0,57,1493	0/0:27,0:27:78.25:0,78,2097	0/0:69,0:69:99:0,199,5272	0/0:26,0:26:72.25:0,72,1948	0/0:21,0:21:60.21:0,60,1679	0/0:35,0:35:99:0,99,2611	1/1:5,13:20:36.12:1407,36,0	0/0:27,0:27:81.28:0,81,2250	0/0:22,0:21:66.17:0,66,1714	0/0:23,0:23:63.14:0,63,1505
chr10	10991268	.	TGA	T	18156.92	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=10.955;DP=621;FS=17.528;HRun=0;HaplotypeScore=79.8732;InbreedingCoeff=0.9999;MQ=91.26;MQ0=4;MQRankSum=-5.445;QD=38.31;ReadPosRankSum=9.526;VQSLOD=4.9303;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,22:25:60.20:860,60,0	1/1:0,13:13:30.10:430,30,0	0/0:29,0:29:74.43:0,74,1357	0/0:20,0:20:54.07:0,54,887	1/1:1,18:19:54.18:767,54,0	1/1:0,29:28:75.25:1075,75,0	1/1:2,21:23:51.17:731,51,0	0/0:40,0:40:99:0,117,2049	1/1:0,20:20:60.20:860,60,0	1/1:1,22:22:63.19:868,63,0	1/1:0,23:23:54.18:774,54,0	1/1:0,25:24:72.24:1032,72,0	1/1:0,17:17:51.17:731,51,0	1/1:0,21:21:60.20:860,60,0	1/1:0,21:21:60.20:860,60,0	1/1:1,19:20:54.18:774,54,0	1/1:2,29:31:81.27:1161,81,0	1/1:0,18:18:48.16:688,48,0	0/0:20,0:20:57.18:0,57,989	0/0:18,0:18:54.17:0,54,961	0/0:20,0:20:60.20:0,60,1079	1/1:0,19:19:48.16:688,48,0	1/1:0,24:23:69.23:989,69,0	1/1:0,17:17:45.15:636,45,0	1/1:0,24:24:63.21:902,63,0	1/1:1,22:23:66.14:886,66,0	1/1:0,26:26:75.25:1074,75,0	1/1:0,13:13:36.12:516,36,0
chr10	10992833	.	C	CGTGT	5562.22	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-12.583;DP=734;FS=14.616;HRun=0;HaplotypeScore=114.6175;InbreedingCoeff=0.9990;MQ=66.56;MQ0=0;MQRankSum=-2.801;QD=43.80;ReadPosRankSum=1.601;VQSLOD=4.7844;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,48:52:90.31:2296,90,0	0/0:10,0:10:23.98:0,24,357	0/0:28,0:26:60.17:0,60,961	0/0:23,0:22:42.13:0,42,683	0/0:18,0:18:42.11:0,42,648	1/1:4,19:23:48.16:1204,48,0	1/1:3,21:26:47.95:1144,48,0	0/0:28,0:28:66.22:0,66,1122	1/1:4,22:26:36.12:918,36,0	0/0:31,0:31:80.95:0,81,1353	0/0:15,0:15:39.12:0,39,648	0/0:38,0:38:99:0,99,1637	0/0:28,0:28:75.09:0,75,1266	0/0:27,0:27:75.25:0,75,1287	0/0:28,0:28:72.16:0,72,1189	0/0:21,0:21:57.20:0,57,998	0/0:23,0:23:63.15:0,63,1033	0/0:24,0:24:60.21:0,60,1042	0/0:31,0:31:72.19:0,72,1092	0/0:20,0:20:45.14:0,45,742	0/0:55,0:55:99:0,129,2117	0/0:20,0:20:45.15:0,45,782	0/0:15,0:15:39.01:0,39,615	0/0:39,0:39:99:0,105,1680	0/0:18,0:18:45.14:0,45,751	0/0:27,0:27:81.28:0,81,1417	0/0:28,0:27:75.20:0,75,1241	0/0:12,0:12:27.09:0,27,473
chr10	10993245	.	CAG	C	2308.80	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=7.820;DP=453;FS=0.531;HRun=0;HaplotypeScore=58.6120;InbreedingCoeff=0.9981;MQ=92.63;MQ0=0;MQRankSum=-2.719;QD=39.13;ReadPosRankSum=0.441;VQSLOD=5.3343;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:60.21:0,60,1158	0/0:8,0:8:24.08:0,24,463	0/0:17,0:17:48.16:0,48,831	0/0:27,0:25:51.80:0,52,1131	0/0:24,0:24:72.25:0,72,1390	0/0:20,0:20:57.16:0,57,1032	0/0:15,0:15:45.15:0,45,858	0/0:20,0:20:57.19:0,57,1048	0/0:14,0:14:42.14:0,42,811	0/0:12,0:12:33.11:0,33,637	0/0:12,0:12:33.10:0,33,597	1/1:0,18:18:51.17:770,51,0	1/1:0,14:14:36.12:551,36,0	1/1:1,11:12:33.11:505,33,0	0/0:13,0:13:39.13:0,39,743	0/0:23,0:23:66.23:0,66,1274	0/0:15,0:15:39.13:0,39,752	0/0:10,0:10:27.09:0,27,521	0/0:20,0:20:57.17:0,57,1008	0/0:18,0:18:54.19:0,54,1034	0/0:17,0:17:48.16:0,48,926	1/1:0,15:15:42.14:643,42,0	0/0:17,0:17:48.16:0,48,902	0/0:13,0:13:30.10:0,30,577	0/0:14,0:14:39.13:0,39,746	0/0:18,0:18:54.19:0,54,1039	0/0:18,0:18:54.19:0,54,1034	0/0:8,0:8:24.08:0,24,464
chr10	10994446	.	T	TAAAA	3444.74	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-5.665;DP=722;FS=6.460;HRun=2;HaplotypeScore=126.0483;InbreedingCoeff=0.9955;MQ=81.09;MQ0=0;MQRankSum=-2.257;QD=66.25;ReadPosRankSum=-1.204;VQSLOD=3.0356;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:78.27:0,78,1415	0/0:11,0:11:33.11:0,33,609	0/0:26,0:26:69.08:0,69,1169	0/0:11,0:11:30.05:0,30,496	1/1:5,29:35:93.27:2220,93,0	0/0:26,0:26:72.23:0,72,1317	0/0:23,0:23:63.20:0,63,1122	0/0:34,0:34:90.30:0,90,1645	0/0:31,0:31:87.28:0,87,1573	0/0:39,0:39:96.33:0,96,1788	0/0:20,0:20:51.17:0,51,947	0/0:25,0:25:75.26:0,75,1399	0/0:31,0:31:93.32:0,93,1739	0/0:28,0:28:78.27:0,78,1454	0/0:24,0:24:69.24:0,69,1284	0/0:36,0:36:99:0,105,1929	0/0:19,0:19:57.20:0,57,1058	0/0:15,0:15:45.12:0,45,807	0/0:19,0:19:54.18:0,54,982	0/0:38,0:38:99:0,108,1933	0/0:42,0:42:99:0,114,2069	0/0:23,0:23:66.23:0,66,1236	0/0:17,0:17:45.14:0,45,783	0/0:26,0:26:78.25:0,78,1428	1/1:1,16:16:48.16:1225,48,0	0/0:32,0:32:93.32:0,93,1736	0/0:41,0:41:99:0,114,2101	0/0:6,0:6:18.06:0,18,337
chr10	10994844	.	TTTTTTTGTTTGTTTGTTTG	T	3737.74	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.831;DP=604;FS=9.949;HRun=0;HaplotypeScore=305.1352;InbreedingCoeff=0.8424;MQ=64.45;MQ0=6;MQRankSum=-4.550;QD=77.87;ReadPosRankSum=0.938;VQSLOD=2.0138;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:24:59.21:0,59,3043	0/0:5,0:5:12.03:0,12,768	0/0:44,0:26:3.05:0,3,1513	0/0:33,0:15:7.71:0,8,581	1/1:2,23:25:51.01:1949,51,0	0/0:17,0:17:33.10:0,33,1620	0/0:11,0:11:27.09:0,27,1194	0/0:26,0:24:66.19:0,66,2624	0/0:16,0:16:20.43:0,20,1091	0/0:27,0:27:75.22:0,75,4052	0/0:25,0:25:69.05:0,69,4147	0/0:14,0:14:42.14:0,42,2915	0/0:18,0:18:54.18:0,54,4035	0/0:22,0:22:63.22:0,63,4319	0/0:22,0:22:57.18:0,57,3580	0/0:18,0:18:51.15:0,51,2928	0/0:28,0:27:63.14:0,63,3628	0/0:20,0:19:57.14:0,57,3354	0/0:23,0:19:54.17:0,54,2366	0/0:40,0:40:99:0,105,5161	0/0:10,0:9:9:0,9,472	0/0:7,0:7:21.07:0,21,1614	0/0:28,0:28:75.25:0,75,4817	0/0:10,0:9:21.04:0,21,1088	1/1:3,20:23:36.12:1789,36,0	0/0:27,0:27:78.25:0,78,3979	0/0:27,0:27:75.24:0,75,4238	0/0:13,0:13:30.03:0,30,1096
chr10	10994860	.	TTTG	T	3705.54	PASS	AB=1.000;AC=16;AF=0.286;AN=56;BaseQRankSum=-3.672;DP=567;FS=3.454;HRun=0;HaplotypeScore=119.9894;InbreedingCoeff=0.6729;MQ=52.58;MQ0=12;MQRankSum=-6.125;QD=20.59;ReadPosRankSum=-3.856;VQSLOD=2.9755;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:23:5.90:0,6,137	0/0:6,0:5:14.98:0,15,138	0/0:26,0:12:19.43:0,19,316	0/0:24,0:6:3.91:0,4,165	1/1:23,0:23:26.72:212,27,0	0/0:15,0:15:14.44:0,14,85	1/1:10,0:10:1.17:112,1,0	1/1:8,22:25:64.94:839,65,0	0/1:15,0:15:17.07:17,0,57	0/0:25,0:24:29.71:0,30,501	0/0:27,0:26:14.64:0,15,518	0/0:16,0:16:48.10:0,48,788	0/0:17,0:17:51.18:0,51,1071	0/0:20,0:20:51.16:0,51,1022	0/0:22,0:22:17.10:0,17,474	0/0:20,0:19:23.97:0,24,421	0/0:27,0:26:17.80:0,18,462	0/0:20,0:17:44.80:0,45,429	1/1:7,18:21:50.98:707,51,0	1/1:3,33:36:95.67:1363,96,0	1/1:2,8:9:9.03:153,9,0	0/0:7,0:7:21.04:0,21,362	0/0:29,0:29:9.32:0,9,621	0/0:9,0:8:0.63:0,1,128	1/1:22,0:22:35.74:253,36,0	0/0:27,0:27:16.56:0,17,533	0/0:25,0:25:11.24:0,11,572	0/1:9,0:7:49.86:50,0,58
chr10	10994863	.	G	GT	1189.79	PASS	AB=0.948;AC=22;AF=0.393;AN=56;BaseQRankSum=4.293;DP=555;FS=5.011;HRun=9;HaplotypeScore=110.2292;InbreedingCoeff=0.3218;MQ=51.45;MQ0=14;MQRankSum=-1.834;QD=3.84;ReadPosRankSum=-1.257;VQSLOD=0.5418;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:23:29.56:318,30,0	0/0:6,0:5:13.99:0,14,65	0/0:24,0:10:17.66:0,18,147	0/0:17,0:6:2.17:0,2,46	0/1:23,0:23:12.02:12,0,21	1/1:14,0:14:20.40:210,20,0	1/1:9,0:9:6.02:65,6,0	1/1:26,2:23:34.34:342,34,0	0/1:6,9:15:20.50:21,0,20	0/0:23,0:22:20.60:0,21,214	0/1:29,0:28:1.76:2,0,194	0/0:17,0:17:32.98:0,33,286	0/0:17,0:17:50.93:0,51,435	0/0:18,0:18:44.90:0,45,382	0/0:22,0:22:10.46:0,10,183	0/0:19,0:18:39.89:0,40,203	0/1:27,0:26:40.10:40,0,193	0/0:21,0:17:40.52:0,41,205	1/1:24,0:20:21.07:210,21,0	1/1:36,0:36:1.25:47,1,0	1/1:10,0:9:2.30:6,2,0	0/0:6,0:6:14.96:0,15,125	0/0:29,0:29:65.04:0,65,326	0/1:9,0:8:15.03:15,0,57	0/1:21,1:22:11.03:11,0,38	0/1:27,0:27:62.69:63,0,180	0/0:25,0:25:34.67:0,35,248	0/1:10,0:8:10.02:10,0,32
chr10	10995055	.	G	GT	1961.40	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=0.085;DP=630;FS=5.395;HRun=9;HaplotypeScore=120.9479;InbreedingCoeff=0.9857;MQ=67.38;MQ0=1;MQRankSum=-1.839;QD=21.32;ReadPosRankSum=0.584;VQSLOD=2.8130;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,29:33:69.13:749,69,0	0/0:5,0:5:15:0,15,130	0/0:26,0:22:52.85:0,53,414	0/0:17,0:12:13.96:0,14,103	0/0:14,0:14:32.98:0,33,285	1/1:3,15:18:15.98:379,16,0	1/1:4,22:26:60.16:663,60,0	0/0:41,0:38:89.92:0,90,775	1/1:3,12:15:30.08:330,30,0	0/0:20,0:19:38.97:0,39,335	0/0:23,0:23:49.37:0,49,537	0/0:28,0:28:71.98:0,72,625	0/0:16,0:16:41.97:0,42,361	0/0:17,0:17:47.98:0,48,416	0/0:41,0:41:99:0,117,1007	0/0:22,0:22:56.96:0,57,490	0/0:34,0:34:71.94:0,72,619	0/0:22,0:22:53.93:0,54,461	0/0:23,0:22:56.96:0,57,492	0/0:14,0:14:32.61:0,33,286	0/0:32,0:30:77.97:0,78,677	0/0:15,0:15:41.98:0,42,361	0/0:15,0:16:47.03:0,47,397	0/0:29,0:29:74.94:0,75,640	0/0:13,0:13:32.98:0,33,283	0/0:36,0:36:58.85:0,59,678	0/0:23,0:23:62.98:0,63,546	0/0:9,0:9:26.99:0,27,234
chr10	10995698	.	TC	T	1709.34	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.633;DP=770;FS=8.677;HRun=2;HaplotypeScore=72.7852;InbreedingCoeff=0.9995;MQ=79.96;MQ0=0;MQRankSum=-2.753;QD=31.65;ReadPosRankSum=0.563;VQSLOD=2.7342;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:58:99:0,175,2605	0/0:17,0:17:51.15:0,51,741	0/0:21,0:21:60.02:0,60,809	0/0:20,1:21:28.84:0,29,777	1/1:0,23:23:54.18:701,54,0	0/0:18,0:18:54.18:0,54,808	0/0:19,0:19:54.17:0,54,787	0/0:32,0:32:96.31:0,96,1404	0/0:31,0:31:93.31:0,93,1390	0/0:33,0:33:93.32:0,93,1394	0/0:14,0:14:42.13:0,42,610	0/0:33,0:33:99:0,99,1483	0/0:25,0:25:75.25:0,75,1121	0/0:24,0:24:69.20:0,69,993	0/0:45,0:45:99:0,135,2001	0/0:27,0:27:81.27:0,81,1212	0/0:46,0:46:99:0,135,2013	0/0:16,0:16:48.12:0,48,691	0/0:22,0:22:66.22:0,66,989	0/0:32,0:32:96.31:0,96,1416	0/0:39,0:39:99:0,108,1619	0/0:32,0:32:93.32:0,93,1394	0/0:19,0:19:57.17:0,57,815	0/0:29,0:29:84.28:0,84,1259	1/1:0,31:31:87.28:1130,87,0	0/0:25,0:25:75.25:0,75,1105	0/0:27,0:27:81.25:0,81,1190	0/0:11,0:11:33.11:0,33,494
chr10	10996855	.	TGTGTGTGTGTGTGTGC	T	2083.86	PASS	AB=1.000;AC=31;AF=0.596;AN=52;BaseQRankSum=3.646;DP=460;FS=39.065;HRun=0;HaplotypeScore=157.0994;InbreedingCoeff=-0.1236;MQ=47.38;MQ0=43;MQRankSum=3.172;QD=5.28;ReadPosRankSum=1.855;VQSLOD=1.2438;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:24:83.25:83,0,316	0/1:10,0:10:26.95:184,0,27	./.	./.	0/0:19,0:18:1.37:0,1,2	0/0:18,0:18:2.94:0,3,73	0/1:37,0:33:88.99:89,0,250	1/1:10,0:9:8.45:88,8,0	0/1:14,0:13:50.66:51,0,144	0/1:27,0:26:99:148,0,202	1/1:18,0:16:3.01:60,3,0	1/1:5,13:15:3.01:142,3,0	1/1:9,0:9:5.42:61,5,0	1/1:2,15:16:0.47:1,0,0	0/1:17,0:15:31.90:182,0,32	0/1:10,0:9:32.87:61,0,33	0/1:38,0:37:99:118,0,175	0/1:26,0:20:92.91:410,0,93	1/1:6,0:5:11.87:80,12,0	1/1:5,0:3:6:51,6,0	1/1:20,0:15:5.98:50,6,0	0/0:4,8:9:0.43:0,0,1	0/1:10,0:10:0.09:0,0,0	0/1:28,0:26:0:0,0,0	0/1:26,0:25:0.04:0,0,0	0/1:16,0:15:79.72:292,0,80	0/0:13,0:9:6.93:0,7,116	1/1:5,0:4:8.27:68,8,0
chr10	10996857	.	TGTGTGTGTGTGTGC	T	2641.71	PASS	AB=0.929;AC=33;AF=0.635;AN=52;BaseQRankSum=2.506;DP=447;FS=29.970;HRun=0;HaplotypeScore=141.1686;InbreedingCoeff=0.0535;MQ=47.53;MQ0=43;MQRankSum=3.393;QD=6.92;ReadPosRankSum=2.602;VQSLOD=1.2046;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:23:99:134,0,151	0/1:9,0:9:2.97:189,0,3	./.	./.	0/0:4,14:17:1.37:0,1,2	0/0:19,0:19:2.87:0,3,48	0/1:36,0:32:89.47:89,0,173	1/1:10,0:9:8.86:88,9,0	0/1:13,0:12:71.66:72,0,73	0/1:11,0:24:35.59:183,0,36	1/1:17,0:15:3:74,3,0	1/1:16,0:13:3.01:110,3,0	1/1:5,0:5:5.40:49,5,0	0/1:17,0:16:0:0,0,0	1/1:7,0:15:6.01:215,6,0	0/1:10,0:9:13.96:105,0,14	0/1:38,0:37:96.42:170,0,96	1/1:24,0:20:26.30:621,26,0	1/1:7,0:6:14.87:107,15,0	1/1:5,0:3:6:51,6,0	1/1:21,0:16:5.68:49,6,0	0/0:12,0:9:0.43:0,0,1	0/1:10,0:10:0.10:0,0,0	0/1:26,0:25:0:1,0,0	0/1:9,16:24:0.04:0,0,0	1/1:16,0:15:2.91:354,3,0	0/0:13,0:9:6.87:0,7,77	1/1:5,0:4:11.94:110,12,0
chr10	10996859	.	TGTGTGTGTGTGCGC	T	4101.44	PASS	AB=0.834;AC=38;AF=0.731;AN=52;BaseQRankSum=-0.236;DP=433;FS=27.902;HRun=0;HaplotypeScore=129.8009;InbreedingCoeff=0.1667;MQ=47.80;MQ0=42;MQRankSum=1.881;QD=10.63;ReadPosRankSum=2.128;VQSLOD=0.9284;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:23:76.18:327,0,76	1/1:8,0:8:18.06:335,18,0	./.	./.	1/1:16,0:15:2.35:18,2,0	0/0:19,0:19:2.70:0,3,24	0/1:36,0:32:98.31:214,0,98	1/1:10,0:9:6.41:24,6,0	0/1:13,0:12:25.85:171,0,26	1/1:23,0:22:22.09:432,22,0	1/1:17,0:15:3:50,3,0	1/1:16,0:13:3.01:97,3,0	1/1:5,0:5:0.08:1,0,0	0/1:17,0:16:0:0,0,0	1/1:13,1:12:6.02:239,6,0	1/1:3,7:9:3.01:129,3,0	0/1:8,29:36:72.04:189,0,72	1/1:20,3:17:48.15:988,48,0	1/1:7,0:6:6.18:21,6,0	1/1:6,0:4:7.73:63,8,0	1/1:23,0:18:2.21:7,2,0	0/0:11,0:9:0.43:0,0,1	0/1:2,7:9:0.09:0,0,0	0/1:5,22:25:0:1,0,0	0/1:23,0:22:0.02:0,0,0	1/1:4,10:13:33.11:623,33,0	0/0:14,0:10:3.54:0,4,41	1/1:5,0:4:12.04:173,12,0
chr10	10996863	.	TGTGTGTGCGC	T	4040.56	PASS	AB=1.000;AC=41;AF=0.759;AN=54;BaseQRankSum=0.163;DP=426;FS=15.132;HRun=0;HaplotypeScore=113.9849;InbreedingCoeff=0.3359;MQ=49.92;MQ0=40;MQRankSum=2.252;QD=10.36;ReadPosRankSum=2.556;VQSLOD=1.4028;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:22:32.08:451,32,0	1/1:7,0:7:18.06:286,18,0	./.	0/1:4,0:1:0:0,0,0	1/1:16,0:15:1.77:18,2,0	0/1:18,0:18:0.10:0,0,0	1/1:34,0:31:17.45:295,17,0	1/1:11,0:11:9.57:33,10,0	1/1:14,0:13:20.12:327,20,0	1/1:18,0:17:24.70:417,25,0	1/1:16,0:14:2.83:15,3,0	1/1:16,0:13:3.01:69,3,0	0/0:4,0:4:0:0,0,0	0/0:17,0:16:0:0,0,0	1/1:14,0:12:6.02:166,6,0	1/1:9,0:8:3.01:83,3,0	0/1:36,0:35:49.65:157,0,50	1/1:23,0:18:51.64:892,52,0	1/1:8,0:7:8.68:30,9,0	1/1:8,0:6:10.53:69,11,0	1/1:27,0:22:3.89:13,4,0	0/1:11,0:9:0.04:0,0,0	0/1:9,0:9:0.05:0,0,0	0/1:25,0:23:0.02:1,0,0	0/1:23,0:22:0.02:0,0,0	1/1:12,0:11:33.11:540,33,0	0/0:6,9:11:0.10:0,0,1	1/1:5,0:4:12.04:178,12,0
chr10	10996865	.	TGTGTGCGC	T	3975.13	PASS	AB=1.000;AC=42;AF=0.778;AN=54;BaseQRankSum=0.126;DP=421;FS=10.184;HRun=0;HaplotypeScore=102.9271;InbreedingCoeff=0.3624;MQ=51.55;MQ0=39;MQRankSum=1.716;QD=10.30;ReadPosRankSum=1.967;VQSLOD=1.3456;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:24:33.49:499,33,0	1/1:7,0:7:18.04:264,18,0	./.	0/1:4,0:1:0:0,0,0	1/1:16,0:15:1.58:19,2,0	1/1:3,14:17:0.10:0,0,0	1/1:31,0:28:22.83:382,23,0	1/1:11,0:11:10.25:34,10,0	1/1:13,1:13:20.48:324,20,0	1/1:18,0:17:25.60:418,26,0	0/1:16,0:14:0:0,0,0	1/1:16,0:13:3.01:55,3,0	0/0:4,0:4:0:0,0,0	0/0:17,0:16:0:0,0,0	1/1:14,0:12:6.02:138,6,0	1/1:9,0:8:3.01:69,3,0	0/1:36,0:35:26.75:129,0,27	1/1:22,0:17:51.17:835,51,0	1/1:8,0:7:8.68:30,9,0	1/1:8,0:6:10.53:69,11,0	1/1:26,0:22:3.89:13,4,0	0/1:11,0:9:0.04:0,0,0	1/1:9,0:9:0.44:1,0,0	0/1:25,0:23:0.17:0,0,0	0/1:23,0:22:0.05:0,0,0	1/1:12,0:11:33.11:518,33,0	0/0:13,0:9:0.12:0,0,1	1/1:5,0:4:12.04:178,12,0
chr10	10996869	.	TGCGC	T	3437.83	PASS	AB=0.925;AC=42;AF=0.840;AN=50;BaseQRankSum=-0.892;DP=414;FS=21.917;HRun=0;HaplotypeScore=93.5214;InbreedingCoeff=0.4016;MQ=51.91;MQ0=36;MQRankSum=1.378;QD=9.07;ReadPosRankSum=2.053;VQSLOD=0.9215;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:23:24.13:425,24,0	1/1:6,0:6:15.05:240,15,0	./.	0/1:5,0:1:0:0,0,0	1/1:16,0:15:2.31:19,2,0	./.	1/1:28,0:25:24.04:344,24,0	1/1:12,0:12:6.75:29,7,0	1/1:13,0:12:15.64:213,16,0	1/1:17,0:17:25.88:418,26,0	0/1:3,13:14:0:0,0,0	1/1:16,0:13:3:27,3,0	0/0:4,0:4:0:0,0,0	0/1:17,0:16:0:0,0,0	1/1:14,0:12:6.02:82,6,0	1/1:9,0:8:3.01:41,3,0	1/1:36,0:35:5.96:83,6,0	1/1:22,0:17:51.06:723,51,0	1/1:7,0:7:8.68:30,9,0	1/1:8,0:6:10.53:69,11,0	1/1:26,0:22:4.36:14,4,0	0/1:10,0:9:0:0,0,0	0/1:9,0:9:0:0,0,0	1/1:25,0:23:0.47:1,0,0	0/1:23,0:22:0:0,0,0	1/1:11,0:11:27.69:454,28,0	./.	1/1:6,0:5:15.05:226,15,0
chr10	10998996	.	GTTTCT	G	2278.34	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.286;DP=722;FS=2.012;HRun=0;HaplotypeScore=162.0555;InbreedingCoeff=0.9997;MQ=78.71;MQ0=0;MQRankSum=-7.935;QD=39.97;ReadPosRankSum=0.820;VQSLOD=3.3363;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:75.24:0,75,2167	0/0:11,0:11:30.10:0,30,843	0/0:24,0:24:55.20:0,55,1530	0/0:19,0:19:39.61:0,40,1126	1/1:2,37:39:78.26:1516,78,0	0/0:22,0:22:57.20:0,57,1676	0/0:22,0:22:60.19:0,60,1679	0/0:35,0:35:93.32:0,93,2772	0/0:27,0:27:78.27:0,78,2344	0/0:30,0:30:81.28:0,81,2395	0/0:22,0:22:54.18:0,54,1512	0/0:18,0:18:54.18:0,54,1571	0/0:27,0:27:75.26:0,75,2242	0/0:19,0:19:54.19:0,54,1610	0/0:47,0:47:99:0,138,4155	0/0:30,0:30:81.27:0,81,2367	0/0:25,0:25:60.21:0,60,1783	0/0:29,0:29:87.30:0,87,2491	0/0:22,0:22:42.14:0,42,1264	0/0:29,0:29:81.28:0,81,2445	0/0:24,0:24:69.24:0,69,2078	0/0:24,0:24:69.24:0,69,2091	0/0:27,0:27:78.27:0,78,2361	0/0:21,0:21:60.21:0,60,1801	1/1:0,18:18:45.15:884,45,0	0/0:38,0:38:99:0,102,3017	0/0:29,0:29:84.29:0,84,2478	0/0:19,0:19:51.14:0,51,1412
chr10	11000342	.	A	AT	7591.08	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=11.707;DP=341;FS=6.962;HRun=0;HaplotypeScore=137.3432;InbreedingCoeff=0.9562;MQ=62.99;MQ0=10;MQRankSum=-9.124;QD=34.35;ReadPosRankSum=2.000;VQSLOD=4.0007;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,5:13:21.04:295,21,0	1/1:4,2:6:12.01:172,12,0	0/0:17,0:11:24.52:0,25,294	0/0:15,0:8:20.30:0,20,237	1/1:7,2:9:12.04:178,12,0	1/1:10,5:15:30.10:454,30,0	1/1:5,1:6:18.06:273,18,0	0/0:28,0:28:78.17:0,78,1014	1/1:6,2:8:18.06:273,18,0	1/1:12,2:14:36.11:527,36,0	1/1:5,0:5:15.05:227,15,0	1/1:6,0:6:18.06:272,18,0	1/1:5,1:6:15.05:218,15,0	1/1:7,2:9:24.08:361,24,0	1/1:11,0:11:30.10:452,30,0	1/1:17,0:17:48.16:725,48,0	1/1:11,4:14:23.53:357,24,0	1/1:4,0:3:9.03:137,9,0	0/0:16,0:15:42.14:0,42,586	0/0:21,0:21:63.11:0,63,816	0/0:23,0:21:54.08:0,54,708	1/1:7,3:10:18.05:270,18,0	1/1:17,0:17:46.95:659,47,0	1/1:8,4:12:26.42:328,26,0	1/1:6,0:5:15.05:227,15,0	1/1:10,0:10:27.09:410,27,0	1/1:13,1:13:27.09:410,27,0	1/1:8,0:8:24.08:365,24,0
chr10	11000761	.	AAAGAGAAGAGAAGAGAAGAG	A	5520.26	PASS	AB=1.000;AC=31;AF=0.574;AN=54;BaseQRankSum=2.375;DP=668;FS=0.593;HRun=0;HaplotypeScore=276.8840;InbreedingCoeff=0.7399;MQ=58.07;MQ0=29;MQRankSum=-2.884;QD=18.34;ReadPosRankSum=0.324;VQSLOD=3.4592;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:35,0:35:15.60:93,16,0	1/1:3,7:10:3.01:123,3,0	0/0:73,0:23:0:0,0,0	./.	0/0:22,0:34:63.20:0,63,2348	1/1:14,0:27:9.03:222,9,0	1/1:14,0:14:6.94:36,7,0	0/0:25,0:22:9.01:0,9,115	1/1:8,0:14:6.02:276,6,0	1/1:12,13:25:25.01:543,25,0	1/1:2,14:16:24.03:441,24,0	0/0:19,0:19:39.13:0,39,2485	0/0:17,0:16:33.11:0,33,2057	0/0:17,0:17:27.04:0,27,1044	1/1:9,6:15:9.03:405,9,0	1/1:10,12:22:9.03:473,9,0	1/1:22,0:22:14.40:582,14,0	1/1:10,0:9:9.03:234,9,0	0/0:12,0:20:24.08:0,24,503	0/0:15,0:22:24.55:0,25,497	0/0:12,0:12:9.03:0,9,179	0/0:15,0:18:24.04:0,24,1096	1/1:10,11:21:6.02:214,6,0	0/1:12,0:12:99:104,0,126	0/0:13,0:21:12.04:0,12,436	1/1:11,18:29:45.61:1213,46,0	1/1:9,12:21:6.02:246,6,0	1/1:4,3:7:6.02:316,6,0
chr10	11000786	.	G	GA	230.75	PASS	AB=0.898;AC=3;AF=0.054;AN=56;BaseQRankSum=4.303;DP=537;FS=2.213;HRun=2;HaplotypeScore=99.8944;InbreedingCoeff=-0.0744;MQ=48.19;MQ0=35;MQRankSum=-4.641;QD=3.34;ReadPosRankSum=0.702;VQSLOD=0.3812;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:25,12:35:99:181,0,480	0/0:9,0:9:9.02:0,9,104	0/0:35,0:4:8.62:0,9,87	0/0:45,0:4:5.75:0,6,49	0/0:32,0:31:92.46:0,92,945	0/1:17,0:17:93.46:105,0,93	0/1:14,1:14:44.13:44,0,289	0/0:31,0:19:51.62:0,52,622	0/0:9,0:9:14.08:0,14,131	0/0:20,0:20:41.71:0,42,478	0/0:14,0:14:27.08:0,27,325	0/0:20,0:20:51.26:0,51,560	0/0:20,0:19:49.71:0,50,552	0/0:16,0:16:44.87:0,45,524	0/0:10,0:10:20.63:0,21,211	0/0:14,0:14:13.89:0,14,105	0/0:22,0:20:48.14:0,48,574	0/0:10,0:8:10.94:0,11,239	0/0:19,0:16:47.29:0,47,475	0/0:17,0:17:41.29:0,41,441	0/0:13,0:11:29.95:0,30,337	0/0:13,0:12:33.99:0,34,411	0/0:19,0:18:30.05:0,30,333	0/0:12,0:11:5.26:0,5,308	0/0:20,0:20:41.92:0,42,478	0/0:22,0:22:56.74:0,57,649	0/0:19,0:19:24.06:0,24,278	0/0:6,0:6:14.22:0,14,131
chr10	11001965	.	G	GA	13451.67	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-10.100;DP=635;FS=8.193;HRun=8;HaplotypeScore=64.3877;InbreedingCoeff=0.9893;MQ=73.72;MQ0=1;MQRankSum=-3.994;QD=27.29;ReadPosRankSum=5.696;VQSLOD=4.9694;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:8,36:44:50.40:1088,50,0	1/1:1,8:9:24.07:277,24,0	0/0:35,1:31:9.92:0,10,439	0/0:27,0:26:32.49:0,32,220	1/1:1,2:25:68.84:391,69,0	1/1:1,18:19:51.15:589,51,0	1/1:0,14:14:39.12:450,39,0	0/0:28,0:28:62.98:0,63,564	1/1:1,13:14:39.12:450,39,0	1/1:2,19:21:60.14:662,60,0	1/1:3,20:23:57.17:658,57,0	1/1:1,18:19:51.15:589,51,0	1/1:3,21:23:45.09:505,45,0	1/1:3,13:16:36.11:415,36,0	1/1:0,24:24:63.19:727,63,0	1/1:3,29:32:84.25:970,84,0	1/1:3,25:28:63.19:727,63,0	1/1:2,24:26:63.19:727,63,0	0/0:16,0:16:45.02:0,45,412	0/0:21,0:22:59.06:0,59,528	0/0:13,0:13:36.02:0,36,329	1/1:3,12:15:33.06:366,33,0	1/1:0,20:20:57.17:658,57,0	1/1:3,14:17:27.08:312,27,0	1/1:4,0:18:42.89:233,43,0	1/1:2,34:37:99:1180,105,0	1/1:4,29:33:93.27:1065,93,0	1/1:0,14:14:36.11:415,36,0
chr10	11003136	.	A	AT	728.15	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-1.416;DP=697;FS=0.749;HRun=6;HaplotypeScore=76.4251;InbreedingCoeff=0.9948;MQ=64.81;MQ0=1;MQRankSum=-0.850;QD=26.97;ReadPosRankSum=-1.421;VQSLOD=3.4464;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,147,1478	0/0:10,0:10:27.06:0,27,275	0/0:23,0:20:36.57:0,37,391	0/0:22,0:22:51.05:0,51,489	1/1:3,18:21:51.10:621,51,0	0/0:20,0:20:57.09:0,57,571	0/0:21,0:21:60.14:0,60,612	0/0:35,0:35:84.15:0,84,834	0/0:25,0:25:66.06:0,66,647	0/0:32,0:32:87.18:0,87,883	0/0:22,0:22:56.13:0,56,599	0/0:25,0:25:72.15:0,72,727	0/0:23,0:23:63.12:0,63,635	0/0:23,0:23:63.10:0,63,628	0/0:34,0:34:96.17:0,96,952	0/0:31,0:30:87.18:0,87,881	0/0:31,0:31:75.13:0,75,751	0/0:21,0:21:60.14:0,60,612	0/0:21,0:21:32.20:0,32,485	0/0:23,0:23:66.11:0,66,654	0/0:30,0:30:78.17:0,78,795	0/0:23,0:23:69.05:0,69,682	0/0:27,0:27:78.14:0,78,781	0/0:32,0:32:93.15:0,93,926	1/1:0,6:6:18.06:226,18,0	0/0:24,0:24:71.87:0,72,694	0/0:29,0:29:72.16:0,72,733	0/0:11,0:11:30.07:0,30,306
chr10	11003694	.	T	TA	529.48	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-3.570;DP=576;FS=17.016;HRun=7;HaplotypeScore=52.2770;InbreedingCoeff=0.9784;MQ=74.05;MQ0=0;MQRankSum=-0.292;QD=21.18;ReadPosRankSum=-1.040;VQSLOD=1.8116;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:24:66.08:0,66,628	0/0:6,0:6:18.03:0,18,174	0/0:18,0:19:13.33:0,13,325	0/0:8,0:8:18.02:0,18,174	1/1:1,12:13:27.08:326,27,0	0/0:30,0:30:90.15:0,90,868	0/0:16,0:16:42.05:0,42,400	0/0:31,0:31:78.07:0,78,740	0/0:18,0:18:51.08:0,51,493	0/0:27,0:27:63.09:0,63,605	0/0:23,0:23:63.10:0,63,608	0/0:21,0:21:57.04:0,57,536	0/0:24,0:24:69.09:0,69,659	0/0:19,0:19:54.09:0,54,521	0/0:19,0:19:48.07:0,48,463	0/0:21,0:20:54.08:0,54,522	0/0:28,0:28:81.10:0,81,774	0/0:18,0:19:53.10:0,53,492	0/0:14,0:14:39.05:0,39,370	0/0:29,0:29:75.12:0,75,724	0/0:33,0:33:81.12:0,81,782	0/0:18,0:18:51.08:0,51,493	0/0:17,0:17:42.05:0,42,400	0/0:11,0:11:30.05:0,30,290	1/1:3,9:12:27.08:324,27,0	0/0:33,0:33:93.14:0,93,898	0/0:33,0:33:81.06:0,81,766	0/0:10,0:10:30:0,30,280
chr10	11003921	.	CT	C	935.76	PASS	AB=0.823;AC=34;AF=0.607;AN=56;BaseQRankSum=0.896;DP=403;FS=24.914;HRun=16;HaplotypeScore=54.5048;InbreedingCoeff=0.4183;MQ=71.07;MQ0=1;MQRankSum=0.408;QD=3.43;ReadPosRankSum=5.039;VQSLOD=-0.7439;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:13:15.03:0,15,79	1/1:3,0:4:4.90:23,5,0	0/0:20,0:16:16.11:0,16,115	0/1:8,0:7:14.30:14,0,22	0/1:4,7:12:5.55:46,0,6	0/0:23,0:28:53.83:0,54,319	0/0:2,0:13:5.83:0,6,34	0/1:25,3:28:10.08:10,0,213	0/0:12,0:12:23.40:0,23,130	1/1:6,3:9:1.84:16,2,0	1/1:7,2:10:10.67:59,11,0	1/1:8,3:11:10.83:84,11,0	1/1:7,5:12:5.47:35,5,0	0/0:10,0:10:2.96:0,3,19	1/1:14,6:20:23.02:140,23,0	1/1:13,5:18:13.54:77,14,0	1/1:11,1:12:8.58:53,9,0	1/1:2,9:11:11.57:71,12,0	0/1:21,4:25:24.48:24,0,212	0/0:17,0:17:14.97:0,15,192	0/0:16,1:17:29.62:0,30,226	1/1:4,1:6:6.28:35,6,0	0/1:6,0:7:11.42:43,0,11	1/1:7,1:8:5.49:35,5,0	1/1:10,2:13:3.13:72,3,0	1/1:9,6:16:16.48:95,16,0	0/1:21,3:25:2.63:74,0,3	1/1:6,8:15:19.61:113,20,0
chr10	11004109	.	TACACGTATACACTC	T	639.30	PASS	AB=0.978;AC=13;AF=0.241;AN=54;BaseQRankSum=5.365;DP=382;FS=2.748;HRun=0;HaplotypeScore=202.1174;InbreedingCoeff=-0.0997;MQ=49.92;MQ0=1;MQRankSum=-6.933;QD=4.41;ReadPosRankSum=-0.008;VQSLOD=2.4832;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:1.60:0,2,64	0/0:8,0:8:3.01:0,3,94	0/0:3,0:2:3.01:0,3,56	0/1:4,0:2:10.06:10,0,55	0/0:20,0:20:14.87:0,15,320	0/1:19,0:19:35.83:36,0,172	0/0:8,0:8:6.02:0,6,133	0/0:30,0:30:90.30:0,90,4872	0/0:4,0:4:3.01:0,3,44	0/1:16,0:16:71.36:71,0,833	0/0:18,0:18:18.06:0,18,417	1/1:6,0:6:3.01:37,3,0	0/1:6,2:8:45.60:46,0,83	1/1:6,1:7:5.92:38,6,0	0/0:12,0:12:18.06:0,18,438	0/0:11,0:11:14.83:0,15,265	0/1:18,0:18:65.03:65,0,258	0/1:9,0:9:62.65:63,0,196	0/0:13,0:13:39.13:0,39,2495	0/0:27,0:27:81.28:0,81,5464	0/0:26,0:26:75.26:0,75,5038	./.	0/0:12,0:12:12.03:0,12,251	0/0:3,0:3:3:0,3,64	0/0:20,0:20:5.69:0,6,189	0/1:25,0:25:99:317,0,792	0/1:25,0:25:46.52:47,0,967	0/1:8,0:8:55.34:55,0,198
chr10	11004114	.	G	GTATGTGTGTGTATATATA	11949.96	PASS	AB=0.870;AC=39;AF=0.780;AN=50;BaseQRankSum=11.346;DP=369;FS=0.513;HRun=0;HaplotypeScore=216.4558;InbreedingCoeff=0.5570;MQ=48.34;MQ0=1;MQRankSum=-9.921;QD=48.19;ReadPosRankSum=2.246;VQSLOD=4.0593;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:14:5.81:278,6,0	1/1:8,0:8:3.01:184,3,0	./.	0/0:3,0:2:3.01:0,3,49	1/1:20,0:20:6.01:74,6,0	0/1:17,0:20:16.37:759,0,16	1/1:6,0:6:3.01:121,3,0	0/0:30,0:30:81.27:0,81,3182	1/1:4,0:4:3.01:47,3,0	1/1:14,0:14:42.14:1409,42,0	1/1:14,0:14:3.01:184,3,0	1/1:5,1:6:6.02:512,6,0	1/1:5,1:6:9.03:476,9,0	1/1:5,2:7:6.02:511,6,0	1/1:11,0:11:9.02:397,9,0	1/1:10,0:10:9.03:295,9,0	1/1:16,0:16:24.05:1041,24,0	1/1:7,0:7:18.04:567,18,0	0/0:17,0:17:51.17:0,51,1968	0/0:31,0:31:93.25:0,93,4121	0/0:29,0:29:84.27:0,84,3713	./.	1/1:10,0:10:6:207,6,0	./.	1/1:19,0:19:3.70:366,4,0	1/1:24,0:24:66.19:2062,66,0	1/1:25,0:25:54.15:1975,54,0	1/1:7,0:7:9.03:486,9,0
chr10	11004116	.	A	ATGTATATGTATATATATG	17730.66	PASS	AB=1.000;AC=39;AF=0.750;AN=52;BaseQRankSum=10.598;DP=364;FS=0.000;HRun=0;HaplotypeScore=209.2506;InbreedingCoeff=0.6012;MQ=48.23;MQ0=1;MQRankSum=-10.361;QD=73.88;ReadPosRankSum=2.533;VQSLOD=4.0533;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:14:5.81:225,6,0	1/1:7,1:8:6.02:477,6,0	0/0:2,0:1:2.99:0,3,23	0/0:3,0:2:3.01:0,3,68	1/1:18,1:19:6.48:74,6,0	0/1:19,0:19:15.97:599,0,16	1/1:6,0:6:3.01:88,3,0	0/0:30,0:30:84.28:0,84,3454	1/1:3,0:3:3.01:47,3,0	1/1:11,3:14:42.14:2360,42,0	1/1:10,3:13:3.01:237,3,0	1/1:6,0:6:6.02:410,6,0	1/1:6,0:6:9.03:363,9,0	1/1:7,0:7:6.02:407,6,0	1/1:7,3:10:12.03:736,12,0	1/1:8,2:10:12.04:613,12,0	1/1:12,3:15:30.09:1859,30,0	1/1:6,1:7:18.06:852,18,0	0/0:17,0:17:51.18:0,51,2115	0/0:31,0:31:93.30:0,93,4192	0/0:32,0:32:90.27:0,90,3896	./.	1/1:8,1:9:6.02:284,6,0	./.	1/1:17,2:19:9.66:950,10,0	1/1:18,4:22:66.19:3352,66,0	1/1:18,5:24:54.19:3138,54,0	1/1:7,1:9:11.78:661,12,0
chr10	11004117	.	TACACTC	T	1253.69	PASS	AB=1.000;AC=28;AF=0.519;AN=54;BaseQRankSum=9.335;DP=309;FS=2.766;HRun=0;HaplotypeScore=140.2925;InbreedingCoeff=0.3789;MQ=51.29;MQ0=1;MQRankSum=-8.050;QD=7.46;ReadPosRankSum=2.278;VQSLOD=2.7922;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:10,0:10:2.69:8,3,0	1/1:8,0:8:2.22:7,2,0	0/0:2,0:1:3:0,3,25	0/1:3,0:2:10.06:10,0,61	0/1:15,0:15:18.87:19,0,27	1/1:11,0:11:4.05:40,4,0	0/0:2,0:2:0:0,0,0	0/0:32,0:32:93.32:0,93,3263	1/1:3,0:3:2.99:24,3,0	1/1:11,0:11:23.08:168,23,0	0/0:12,0:12:3.16:0,3,64	0/0:1,1:2:2.22:0,2,7	0/0:3,0:3:1.82:0,2,5	0/0:3,0:3:4.99:0,5,19	0/1:8,0:8:2.39:2,0,29	0/1:9,0:9:25.90:80,0,26	0/1:12,0:12:0.76:64,0,1	1/1:6,0:6:4.64:74,5,0	0/0:17,0:17:51.18:0,51,1844	0/0:33,0:33:96.33:0,96,3388	0/0:32,0:32:93.32:0,93,3209	./.	1/1:5,1:6:3.88:26,4,0	0/1:2,0:2:0:0,0,0	1/1:18,0:18:7.27:47,7,0	1/1:16,1:17:36.14:406,36,0	1/1:20,0:20:27.29:321,27,0	1/1:8,1:9:10.99:116,11,0
chr10	11004118	.	ACAC	A	875.75	PASS	AB=0.771;AC=26;AF=0.481;AN=54;BaseQRankSum=8.230;DP=303;FS=4.848;HRun=0;HaplotypeScore=130.4088;InbreedingCoeff=0.3429;MQ=51.10;MQ0=1;MQRankSum=-7.015;QD=5.69;ReadPosRankSum=2.203;VQSLOD=2.5021;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:2,7:9:1.28:0,1,4	1/1:6,2:8:2.50:9,2,0	0/0:2,0:1:3.01:0,3,36	0/1:3,0:2:10.05:10,0,50	0/1:9,4:13:10.20:19,0,10	0/1:4,8:12:0.68:36,0,1	0/0:0,2:2:0:0,0,0	0/0:33,0:33:96.33:0,96,2350	1/1:1,2:3:2.99:24,3,0	1/1:8,3:11:9.24:141,9,0	0/0:8,3:11:1.31:0,1,26	0/0:2,0:2:1.55:0,2,4	0/0:3,0:3:1.82:0,2,5	0/0:3,0:3:4.07:0,4,12	0/1:5,2:7:7.46:7,0,10	0/1:7,2:9:7.43:42,0,7	1/1:7,4:11:3.15:36,3,0	1/1:2,4:6:0.77:71,1,0	0/0:17,0:17:51.18:0,51,1256	0/0:32,0:32:96.33:0,96,2354	0/0:32,0:32:93.32:0,93,2237	./.	1/1:5,1:6:2.04:6,2,0	0/1:1,1:2:0:0,0,0	1/1:13,5:18:7.75:58,8,0	1/1:9,7:16:19.43:313,19,0	1/1:17,3:20:13.03:171,13,0	1/1:7,2:9:11.06:84,11,0
chr10	11004120	.	AC	A	493.54	PASS	AB=0.929;AC=35;AF=0.700;AN=50;BaseQRankSum=10.171;DP=303;FS=1.958;HRun=1;HaplotypeScore=124.9917;InbreedingCoeff=0.4708;MQ=51.05;MQ0=0;MQRankSum=-9.131;QD=3.03;ReadPosRankSum=3.614;VQSLOD=0.2300;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,2:9:2.50:9,2,0	1/1:7,1:8:2.88:15,3,0	0/0:1,0:1:3.01:0,3,38	0/1:3,0:2:6.25:6,0,26	0/0:11,1:12:1.24:0,1,4	1/1:9,3:12:4.77:21,5,0	./.	0/0:37,0:37:99:0,108,1650	./.	1/1:6,3:9:7.59:65,8,0	0/1:8,3:11:3.20:8,0,3	1/1:1,1:2:2.50:9,2,0	1/1:2,1:3:2.22:7,2,0	1/1:1,2:3:4.44:14,4,0	1/1:4,3:7:1.78:23,2,0	1/1:7,2:9:1.48:17,1,0	1/1:8,3:11:7.13:31,7,0	1/1:5,1:6:4.63:29,5,0	0/0:18,0:18:54.18:0,54,842	0/0:33,0:33:99:0,99,1574	0/0:32,0:32:93.30:0,93,1455	./.	1/1:4,1:5:2.84:14,3,0	0/1:2,0:2:0:0,0,0	1/1:16,2:18:8.27:40,8,0	1/1:12,4:16:26.22:148,26,0	1/1:12,6:18:25.25:126,25,0	1/1:10,1:11:14.26:63,14,0
chr10	11004122	.	TC	T	779.39	PASS	AB=0.764;AC=35;AF=0.700;AN=50;BaseQRankSum=9.891;DP=305;FS=2.744;HRun=1;HaplotypeScore=123.7852;InbreedingCoeff=0.4970;MQ=53.22;MQ0=0;MQRankSum=-9.455;QD=4.84;ReadPosRankSum=3.812;VQSLOD=0.8323;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,8:9:2.60:11,3,0	1/1:5,3:8:2.90:16,3,0	0/0:2,0:2:6.02:0,6,93	0/1:3,0:2:6.25:6,0,42	0/0:7,5:12:1.24:0,1,4	1/1:1,8:12:5.81:43,6,0	./.	0/0:38,0:38:99:0,108,1726	./.	1/1:3,6:9:10.96:97,11,0	0/1:4,6:10:3.20:8,0,3	1/1:1,0:2:2.60:10,3,0	1/1:2,0:3:2.50:9,2,0	1/1:1,0:3:4.87:17,5,0	1/1:2,5:7:1.78:24,2,0	1/1:4,4:8:1.73:23,2,0	1/1:4,7:11:7.81:38,8,0	1/1:1,5:6:5.24:54,5,0	0/0:19,0:19:57.18:0,57,887	0/0:34,0:34:99:0,102,1583	0/0:32,0:32:93.32:0,93,1481	./.	1/1:3,2:5:2.84:14,3,0	0/1:1,1:2:0:0,0,0	1/1:11,7:18:8.78:59,9,0	1/1:4,11:15:24.37:209,24,0	1/1:10,8:19:27.76:187,28,0	1/1:8,3:11:17.53:109,18,0
chr10	11004383	.	AAC	A	858.13	PASS	AB=0.895;AC=23;AF=0.523;AN=44;BaseQRankSum=-3.362;DP=531;FS=1.904;HRun=0;HaplotypeScore=81.4148;InbreedingCoeff=0.3280;MQ=69.85;MQ0=14;MQRankSum=1.088;QD=3.01;ReadPosRankSum=0.202;VQSLOD=1.8044;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:39:11.99:0,12,108	1/1:3,3:6:2.87:32,3,0	./.	0/0:36,0:22:0:0,0,0	0/0:11,0:10:5.97:0,6,46	0/1:28,0:27:0.91:1,0,50	0/1:18,2:20:62.85:63,0,95	./.	0/1:17,1:18:49.68:50,0,84	1/1:7,4:11:5.96:44,6,0	./.	0/0:17,0:16:8.68:0,9,65	0/0:20,0:20:11.98:0,12,98	0/0:18,0:17:11.04:0,11,87	1/1:16,4:20:3.01:32,3,0	1/1:10,0:11:5.84:40,6,0	1/1:17,7:26:11.86:110,12,0	1/1:8,8:16:1.42:144,1,0	./.	0/1:16,0:16:22.97:23,0,57	1/1:44,0:46:8.03:36,8,0	0/0:8,0:8:11.76:0,12,97	./.	0/1:22,16:39:4.75:287,0,5	0/0:14,0:17:5.65:0,6,48	1/1:13,0:13:5.96:42,6,0	1/1:10,1:12:11.85:103,12,0	./.
chr10	11004431	.	C	CAG	2257.58	PASS	AB=1.000;AC=16;AF=0.286;AN=56;BaseQRankSum=1.728;DP=568;FS=0.920;HRun=0;HaplotypeScore=86.4917;InbreedingCoeff=0.7961;MQ=67.33;MQ0=22;MQRankSum=-0.805;QD=12.68;ReadPosRankSum=1.585;VQSLOD=3.0072;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,23:31:0.10:87,0,0	0/0:8,0:8:11.78:0,12,86	0/0:41,0:17:45.05:0,45,448	0/0:51,0:26:61.69:0,62,582	0/0:9,0:9:17.45:0,17,124	1/1:28,0:28:52.26:474,52,0	1/1:20,0:20:31.74:278,32,0	0/0:19,0:19:44.93:0,45,393	0/1:16,0:15:10.15:176,0,10	0/0:15,0:15:42.42:0,42,376	0/0:14,0:13:17.96:0,18,144	1/1:18,0:18:44.49:400,44,0	1/1:17,0:19:41.81:398,42,0	1/1:17,0:18:36.29:335,36,0	0/0:15,0:15:21.44:0,21,172	0/0:15,0:15:35.96:0,36,299	0/0:21,0:21:44.92:0,45,366	0/0:20,0:19:41.79:0,42,323	0/0:11,0:11:29.98:0,30,258	0/0:14,0:15:41.90:0,42,355	0/0:49,0:46:99:0,108,882	1/1:14,0:14:28:297,28,0	0/0:8,0:7:11.98:0,12,97	0/0:38,0:38:92.66:0,93,733	0/1:13,0:13:3.87:4,0,41	0/0:19,0:18:53.83:0,54,454	0/0:12,0:12:35.93:0,36,298	0/0:10,0:10:29.85:0,30,227
chr10	11004531	.	A	AG	2753.88	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-8.339;DP=535;FS=8.989;HRun=9;HaplotypeScore=60.2537;InbreedingCoeff=0.9743;MQ=79.47;MQ0=0;MQRankSum=-2.236;QD=20.25;ReadPosRankSum=0.522;VQSLOD=3.9723;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,20:25:47.96:512,48,0	0/0:10,0:10:24:0,24,208	0/0:16,0:16:23.97:0,24,211	0/0:15,0:17:19.44:0,19,189	0/0:22,4:26:53.84:0,54,481	1/1:4,23:27:57.15:630,57,0	1/1:4,9:13:7.03:304,7,0	0/0:29,0:29:71.93:0,72,614	1/1:1,15:16:22.10:472,22,0	0/0:25,0:25:62.69:0,63,516	0/0:15,0:15:29.96:0,30,260	1/1:1,10:11:27.06:290,27,0	1/1:1,11:12:21.06:232,21,0	1/1:5,9:14:16.12:225,16,0	0/0:30,0:30:71.96:0,72,621	0/0:14,0:14:29.95:0,30,253	0/0:16,0:16:44.99:0,45,390	0/0:23,0:23:53.88:0,54,454	0/0:14,0:14:32.95:0,33,278	0/0:26,0:26:53.45:0,53,452	0/0:23,0:23:56.47:0,56,477	1/1:7,10:17:27.07:293,27,0	0/0:17,1:18:11.80:0,12,329	0/0:26,0:26:65.96:0,66,570	0/0:19,0:19:50.98:0,51,442	0/0:22,0:22:37.03:0,37,380	0/0:16,0:16:38.89:0,39,322	0/0:14,0:14:29.96:0,30,260
chr10	11005346	.	GT	G	11181.79	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=9.808;DP=633;FS=0.391;HRun=7;HaplotypeScore=76.6951;InbreedingCoeff=0.9474;MQ=62.05;MQ0=6;MQRankSum=-1.621;QD=24.36;ReadPosRankSum=6.746;VQSLOD=4.4545;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,38:38:99:1099,108,0	1/1:0,5:5:12.03:121,12,0	0/0:37,0:19:33.12:0,33,378	0/0:35,0:22:24.38:0,24,351	1/1:0,20:20:57.12:576,57,0	1/1:2,17:19:39.09:397,39,0	1/1:2,12:14:27.06:275,27,0	0/0:36,0:36:84.20:0,84,1018	1/1:0,18:18:48.11:486,48,0	1/1:1,18:19:54.12:550,54,0	1/1:1,17:18:45.10:459,45,0	1/1:1,26:27:60.13:611,60,0	1/1:1,19:20:54.12:549,54,0	1/1:2,14:16:33.07:335,33,0	1/1:2,29:31:72.12:723,72,0	1/1:2,23:25:57.13:581,57,0	1/1:3,31:34:75.59:844,76,0	1/1:2,13:15:32.66:315,33,0	0/0:21,0:21:51.14:0,51,624	0/0:25,0:25:75.23:0,75,924	0/0:20,0:19:51.10:0,51,622	1/1:2,11:13:4.92:248,5,0	1/1:0,17:17:42.09:428,42,0	1/1:3,18:21:45.10:459,45,0	1/1:0,15:15:42.10:428,42,0	1/1:5,35:40:96.17:966,96,0	1/1:2,27:29:66.14:668,66,0	1/1:3,2:5:6.01:61,6,0
chr10	11006510	.	CCT	C	4789.23	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=11.101;DP=741;FS=12.976;HRun=0;HaplotypeScore=97.4378;InbreedingCoeff=0.9997;MQ=80.50;MQ0=0;MQRankSum=-2.337;QD=45.61;ReadPosRankSum=2.465;VQSLOD=5.6839;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,157,3153	0/0:12,0:12:36.12:0,36,726	0/0:26,0:26:78.24:0,78,1459	0/0:31,0:31:90.24:0,90,1692	0/0:27,0:27:78.27:0,78,1571	0/0:20,0:20:60.21:0,60,1208	0/0:26,0:26:78.25:0,78,1548	0/0:43,0:43:99:0,126,2513	0/0:29,0:29:87.27:0,87,1694	0/0:28,0:28:84.29:0,84,1671	0/0:27,0:27:81.28:0,81,1620	1/1:0,32:32:90.31:1465,90,0	1/1:0,24:24:72.25:1173,72,0	1/1:0,31:31:84.29:1369,84,0	0/0:33,0:33:99:0,99,1960	0/0:33,0:33:99:0,99,1999	0/0:19,0:19:57.18:0,57,1122	0/0:16,0:16:48.16:0,48,975	0/0:31,0:31:90.31:0,90,1787	0/0:24,0:24:72.25:0,72,1441	0/0:30,0:30:90.31:0,90,1818	1/1:0,18:18:48.16:782,48,0	0/0:20,0:20:60.21:0,60,1207	0/0:32,0:32:96.31:0,96,1901	0/0:13,0:13:39.13:0,39,773	0/0:25,0:25:75.26:0,75,1488	0/0:30,0:30:90.31:0,90,1796	0/0:9,0:9:27.09:0,27,548
chr10	11006694	.	AG	A	1856.78	PASS	AB=0.936;AC=19;AF=0.339;AN=56;BaseQRankSum=1.603;DP=573;FS=0.448;HRun=6;HaplotypeScore=77.3376;InbreedingCoeff=0.7420;MQ=66.17;MQ0=7;MQRankSum=1.570;QD=8.93;ReadPosRankSum=-2.741;VQSLOD=0.2643;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:43.24:0,43,409	0/0:9,0:9:14.98:0,15,101	0/0:42,0:12:18.55:0,19,154	0/1:31,1:11:16.56:17,0,64	0/0:24,0:24:6.04:0,6,260	0/0:19,0:19:35.31:0,35,234	0/0:18,0:18:35.05:0,35,255	1/1:31,1:32:69.63:562,70,0	0/0:17,0:17:35.43:0,35,252	0/0:23,0:23:47.72:0,48,331	0/0:21,0:21:41.93:0,42,294	1/1:5,11:16:13.73:124,14,0	1/1:4,11:15:8.97:81,9,0	1/1:5,18:23:17.25:169,17,0	0/0:20,0:20:48.82:0,49,377	0/0:18,0:18:35.35:0,35,239	0/0:17,0:17:30.04:0,30,181	0/0:22,0:22:22.51:0,23,270	1/1:14,1:15:35.86:291,36,0	1/1:17,1:18:38.86:320,39,0	1/1:22,0:22:23.99:209,24,0	1/1:11,1:12:30.71:257,31,0	0/0:11,0:11:22.73:0,23,185	0/1:11,1:12:6.56:7,0,138	0/0:25,0:25:44.86:0,45,283	0/0:20,0:20:34.97:0,35,206	0/0:29,0:28:57.49:0,57,370	0/1:10,1:11:24.51:25,0,72
chr10	11006699	.	GGA	G	2093.31	PASS	AB=0.939;AC=15;AF=0.268;AN=56;BaseQRankSum=4.648;DP=612;FS=4.854;HRun=0;HaplotypeScore=84.2020;InbreedingCoeff=0.1803;MQ=69.89;MQ0=7;MQRankSum=3.297;QD=7.53;ReadPosRankSum=-1.216;VQSLOD=2.7737;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:16.14:0,16,291	0/0:8,0:8:17.82:0,18,134	0/0:52,0:17:41.18:0,41,342	0/1:37,0:13:23.11:23,0,84	0/1:28,1:29:97.01:97,0,146	0/0:19,0:19:10:0,10,103	0/0:19,0:19:12.10:0,12,185	1/1:5,24:32:81.25:742,81,0	0/0:16,0:16:4.34:0,4,134	0/0:25,0:25:26.84:0,27,453	0/0:21,0:21:30.02:0,30,414	0/1:18,0:18:28.52:29,0,67	0/1:21,0:21:33.98:34,0,97	0/1:25,1:26:56.87:57,0,82	0/0:20,0:20:50.76:0,51,452	0/0:15,0:15:36.22:0,36,268	0/0:19,0:19:34.19:0,34,283	0/0:20,0:20:25.58:0,26,323	1/1:2,13:16:41.54:358,42,0	1/1:3,17:20:33.28:471,33,0	0/1:2,18:21:5.26:311,0,5	0/1:14,0:14:56.48:119,0,56	0/0:17,0:17:29.74:0,30,262	0/0:11,0:11:14.57:0,15,188	0/1:23,0:23:4.19:4,0,85	0/1:21,0:21:21:21,0,232	0/0:31,0:30:61.85:0,62,531	0/0:11,0:11:3.83:0,4,137
chr10	11006796	.	C	CA	1821.71	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-3.910;DP=654;FS=1.108;HRun=6;HaplotypeScore=65.0060;InbreedingCoeff=0.9982;MQ=70.97;MQ0=0;MQRankSum=-0.391;QD=29.38;ReadPosRankSum=1.379;VQSLOD=4.3709;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:77.96:0,78,778	0/0:15,0:15:42.09:0,42,428	0/0:29,0:28:50.93:0,51,513	0/0:9,0:9:24.05:0,24,245	0/0:26,0:26:72.16:0,72,734	0/0:30,0:30:84.18:0,84,850	0/0:11,0:11:23.98:0,24,238	0/0:36,0:35:99:0,99,1003	0/0:25,0:25:69.15:0,69,704	0/0:30,0:30:84.19:0,84,855	0/0:36,0:36:99:0,102,1040	1/1:1,20:21:57.18:717,57,0	1/1:2,9:11:24.08:302,24,0	1/1:1,15:16:39.12:491,39,0	0/0:30,0:30:90.18:0,90,909	0/0:18,0:18:48.10:0,48,490	0/0:16,0:16:39.06:0,39,389	0/0:21,0:21:45.07:0,45,451	0/0:26,0:26:69.15:0,69,703	0/0:37,0:37:99:0,108,1095	0/0:17,0:17:45.10:0,45,459	1/1:0,14:14:39.08:473,39,0	0/0:37,0:37:99:0,105,1071	0/0:19,0:19:54.12:0,54,551	0/0:26,0:26:78.18:0,78,796	0/0:25,0:25:69.14:0,69,697	0/0:28,0:28:81.18:0,81,826	0/0:17,0:17:51.12:0,51,520
chr10	11006894	.	A	AG	1307.60	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-6.078;DP=613;FS=2.736;HRun=7;HaplotypeScore=75.5310;InbreedingCoeff=0.9967;MQ=76.25;MQ0=0;MQRankSum=-3.598;QD=29.06;ReadPosRankSum=0.109;VQSLOD=4.1774;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:72.08:0,72,684	0/0:10,0:10:24.04:0,24,232	0/0:12,0:12:24.03:0,24,229	0/0:18,0:20:39.84:0,40,383	1/1:3,29:32:84.21:994,84,0	0/0:28,0:28:81.11:0,81,776	0/0:17,0:17:48.04:0,48,447	0/0:32,0:32:75.10:0,75,720	0/0:25,0:25:72.11:0,72,695	0/0:24,0:23:63.04:0,63,594	0/0:13,0:13:33.05:0,33,319	0/0:24,0:24:69.06:0,69,652	0/0:17,0:17:48.08:0,48,463	0/0:22,0:22:57.09:0,57,550	0/0:14,0:14:36.04:0,36,338	0/0:23,0:23:63.08:0,63,600	0/0:21,0:21:48.07:0,48,463	0/0:33,3:36:26.68:0,27,825	0/0:18,0:18:54.09:0,54,521	0/0:25,0:25:66.07:0,66,629	0/0:18,0:18:51.07:0,51,488	0/0:21,0:21:63.09:0,63,605	0/0:24,0:24:69.02:0,69,647	0/0:10,0:10:30.05:0,30,290	1/1:1,12:13:36.11:435,36,0	0/0:34,0:34:93.13:0,93,891	0/0:31,0:31:84.08:0,84,797	0/0:22,0:22:44.83:0,45,452
chr10	11007191	.	C	CT	5151.92	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-10.778;DP=612;FS=1.105;HRun=9;HaplotypeScore=57.4044;InbreedingCoeff=0.9894;MQ=80.37;MQ0=0;MQRankSum=0.379;QD=25.63;ReadPosRankSum=2.704;VQSLOD=5.5266;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,19:22:51.14:564,51,0	0/0:11,0:11:29.98:0,30,260	0/0:21,0:21:39.38:0,39,303	0/0:16,0:15:12.29:0,12,201	1/1:8,23:32:68.13:749,68,0	1/1:2,19:21:54.15:597,54,0	1/1:3,11:14:30.08:332,30,0	0/0:42,0:42:56.77:0,57,720	1/1:3,14:17:42.11:465,42,0	0/0:24,0:24:56.97:0,57,495	0/0:23,0:23:65.99:0,66,573	1/1:3,16:19:39.11:431,39,0	1/1:3,14:17:16.06:405,16,0	1/1:2,17:19:25.08:505,25,0	0/0:36,0:38:76.01:0,76,700	0/0:27,0:27:68.96:0,69,595	0/0:22,0:22:56.98:0,57,494	0/0:15,0:15:44.99:0,45,390	0/0:26,0:26:65.97:0,66,573	0/0:34,0:34:95.98:0,96,833	0/0:16,0:16:18.55:0,19,315	1/1:0,19:21:59.95:631,60,0	0/0:19,0:19:50.98:0,51,442	0/0:8,0:8:14.95:0,15,126	1/1:1,17:18:22.07:472,22,0	0/0:26,0:26:56.96:0,57,495	0/0:31,0:31:86.96:0,87,755	0/0:12,0:12:35.99:0,36,313
chr10	11008173	.	AAAAAAAAG	A	1395.08	PASS	AB=1.000;AC=13;AF=0.241;AN=54;BaseQRankSum=2.580;DP=486;FS=23.450;HRun=0;HaplotypeScore=105.2564;InbreedingCoeff=0.4127;MQ=43.93;MQ0=34;MQRankSum=-5.242;QD=9.18;ReadPosRankSum=-0.989;VQSLOD=0.5363;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:19,2:21:38.58:487,39,0	0/0:10,0:10:27.03:0,27,515	0/0:27,0:2:6.02:0,6,85	0/0:39,0:3:5.99:0,6,49	0/0:23,0:23:56.40:0,56,1368	1/1:6,0:5:6.02:69,6,0	1/1:17,3:18:24.30:437,24,0	0/1:27,0:26:24.47:24,0,248	1/1:13,0:11:18.04:273,18,0	0/0:21,0:20:42.60:0,43,1217	0/0:22,0:21:40.25:0,40,946	0/1:10,0:8:17.56:18,0,201	0/0:13,0:11:11.87:0,12,357	0/1:11,0:10:32.58:33,0,190	0/0:13,0:12:21.07:0,21,594	0/0:17,0:14:20.92:0,21,513	0/0:22,0:22:30.79:0,31,946	0/0:19,0:18:39.58:0,40,935	0/1:23,0:20:99:157,0,126	0/1:21,0:21:67.01:67,0,193	0/0:8,0:8:7.65:0,8,76	./.	0/0:17,0:17:31.59:0,32,568	0/0:17,0:16:8.84:0,9,239	0/0:14,0:14:36.10:0,36,1081	0/0:17,0:16:39.12:0,39,1255	0/0:16,0:15:21.05:0,21,517	0/0:15,0:15:42.14:0,42,1189
chr10	11008181	.	GAAAAAAAAAAGAAA	G	2209.52	PASS	AB=0.892;AC=12;AF=0.214;AN=56;BaseQRankSum=5.966;DP=475;FS=24.471;HRun=0;HaplotypeScore=146.6599;InbreedingCoeff=0.4732;MQ=48.07;MQ0=17;MQRankSum=-2.450;QD=15.56;ReadPosRankSum=-1.175;VQSLOD=0.9753;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:22:50.67:94,0,51	0/0:9,0:9:21.02:0,21,785	0/0:31,0:4:6.58:0,7,48	0/0:30,0:4:8.46:0,8,158	0/0:22,0:22:54.09:0,54,2090	1/1:9,0:9:2.97:20,3,0	0/1:19,0:18:4.09:112,0,4	1/1:9,18:27:45.58:774,46,0	0/1:12,0:11:15.65:25,0,16	0/0:21,0:20:45.59:0,46,2117	0/0:20,0:21:33.10:0,33,1497	0/0:6,0:8:12.04:0,12,404	0/0:9,0:9:18.06:0,18,735	0/0:8,0:8:14.99:0,15,462	0/0:15,0:15:24.07:0,24,945	0/0:14,0:12:27.09:0,27,1030	0/0:19,0:19:33.05:0,33,1408	0/0:17,0:16:39.07:0,39,1524	1/1:7,16:20:45.14:935,45,0	0/1:5,16:21:99:320,0,105	1/1:7,0:9:4.19:90,4,0	0/0:5,0:4:5.98:0,6,49	0/0:16,0:16:25.77:0,26,554	0/0:16,0:15:6.48:0,6,294	0/0:16,0:16:38.49:0,38,1812	0/0:21,0:20:49.90:0,50,2057	0/0:17,0:17:27.09:0,27,774	0/0:15,0:15:39.11:0,39,1977
chr10	11008190	.	AAG	A	1270.73	PASS	AB=1.000;AC=24;AF=0.429;AN=56;BaseQRankSum=7.850;DP=452;FS=6.020;HRun=0;HaplotypeScore=70.8694;InbreedingCoeff=0.2927;MQ=49.07;MQ0=15;MQRankSum=-2.801;QD=5.19;ReadPosRankSum=-3.392;VQSLOD=1.1273;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:18:10.11:144,10,0	0/0:7,0:7:16.63:0,17,169	0/0:24,0:5:1.49:0,1,27	0/0:22,0:5:5.83:0,6,38	0/0:22,0:22:23.63:0,24,431	1/1:0,9:9:3.01:39,3,0	1/1:10,10:19:28.30:226,28,0	1/1:25,0:25:34.65:242,35,0	1/1:12,0:12:19.72:159,20,0	0/0:22,0:21:45.77:0,46,385	0/0:18,0:18:3.05:0,3,178	0/1:13,0:12:10.92:14,0,11	0/1:10,0:9:17.09:17,0,23	0/1:7,0:6:14.44:26,0,14	0/0:14,0:14:23.96:0,24,242	0/1:16,0:14:12.25:12,0,186	0/1:18,0:18:87.97:88,0,129	0/1:15,0:14:31.55:32,0,169	1/1:21,0:18:32.35:246,32,0	1/1:20,0:20:15.13:123,15,0	1/1:10,0:10:8.79:57,9,0	0/0:6,0:5:2.76:0,3,7	0/1:15,0:15:20.55:21,0,121	0/1:16,0:16:11.70:12,0,32	0/0:17,0:17:9.16:0,9,320	0/0:20,0:19:11.73:0,12,376	0/0:17,0:16:20.46:0,20,166	0/0:18,0:18:13.21:0,13,212
chr10	11008528	.	G	GT	356.92	PASS	AB=0.856;AC=6;AF=0.107;AN=56;BaseQRankSum=-0.423;DP=602;FS=4.121;HRun=12;HaplotypeScore=68.9094;InbreedingCoeff=0.1455;MQ=74.56;MQ0=1;MQRankSum=2.932;QD=4.15;ReadPosRankSum=-2.497;VQSLOD=0.6316;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:33:79.66:0,80,554	0/0:9,0:10:22.90:0,23,159	0/0:28,0:17:1.57:0,2,120	0/1:20,0:19:15.38:15,0,56	0/1:7,13:23:11.13:262,0,11	0/0:23,0:25:57.09:0,57,459	0/0:20,0:20:41.69:0,42,304	0/0:42,1:44:21.22:0,21,450	0/0:17,0:17:40.60:0,41,268	0/0:22,0:22:44.65:0,45,328	0/0:22,0:22:44.80:0,45,301	0/0:13,1:14:0.44:0,0,157	0/1:12,3:15:64.69:65,0,85	0/0:14,0:14:35.68:0,36,256	0/0:24,0:25:70.59:0,71,504	0/0:19,0:18:41.65:0,42,306	0/0:20,0:20:3.22:0,3,243	0/0:21,1:22:18.49:0,18,293	0/1:15,0:15:21.54:22,0,126	0/0:32,3:36:16.99:0,17,356	0/0:38,0:38:54.49:0,54,539	0/0:14,0:14:31.30:0,31,219	0/0:13,0:14:28.82:0,29,201	0/0:14,3:17:0.60:0,1,168	1/1:2,10:12:12.02:117,12,0	0/0:18,0:18:36.77:0,37,256	0/0:26,2:26:36.26:0,36,424	0/0:15,0:16:37.75:0,38,268
chr10	11010562	.	GA	G	2910.26	PASS	AB=0.953;AC=23;AF=0.411;AN=56;BaseQRankSum=10.141;DP=744;FS=2.720;HRun=12;HaplotypeScore=108.0893;InbreedingCoeff=0.7174;MQ=59.56;MQ0=11;MQRankSum=-1.293;QD=8.34;ReadPosRankSum=3.646;VQSLOD=2.9050;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:11.70:0,12,176	0/0:2,0:3:8.85:0,9,75	0/0:36,0:15:32.51:0,33,294	0/0:30,1:17:14.70:0,15,167	1/1:4,27:31:68.67:534,69,0	0/1:22,1:23:21.72:22,0,63	0/1:16,1:17:12.75:13,0,106	1/1:8,0:32:49.49:150,49,0	0/0:18,0:19:9.52:0,10,149	0/1:21,1:22:3.76:4,0,312	0/0:31,3:34:14.44:0,14,676	1/1:7,21:29:25.67:319,26,0	1/1:6,24:30:57.88:568,58,0	1/1:3,21:24:29.37:411,29,0	0/0:36,3:40:17.27:0,17,695	0/0:31,3:34:34.66:0,35,700	0/0:18,3:21:4.57:0,5,393	0/0:15,1:16:12.84:0,13,312	1/1:6,3:34:51.30:175,51,0	1/1:5,0:33:35.21:114,35,0	1/1:2,0:20:30.55:88,31,0	1/1:5,25:31:43.93:470,44,0	0/0:23,1:24:36.53:0,37,518	0/0:21,2:23:3.78:0,4,435	1/1:2,15:18:10.45:254,10,0	0/0:27,1:28:34.32:0,34,506	0/0:23,2:24:8.88:0,9,478	0/0:26,2:28:13.46:0,13,466
chr10	11010569	.	AAAAAAC	A	1483.07	PASS	AB=0.759;AC=6;AF=0.107;AN=56;BaseQRankSum=11.123;DP=765;FS=0.512;HRun=0;HaplotypeScore=184.7096;InbreedingCoeff=0.5748;MQ=58.96;MQ0=10;MQRankSum=-8.033;QD=17.24;ReadPosRankSum=2.911;VQSLOD=3.2312;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:16,12:27:52.87:460,0,53	0/0:3,0:3:8.82:0,9,200	0/0:31,0:12:35.65:0,36,634	0/0:27,0:12:31.86:0,32,417	0/0:34,0:34:80.99:0,81,1284	1/1:14,8:22:35.04:543,35,0	1/1:15,3:18:7.55:283,8,0	0/0:39,0:38:99:0,101,1079	0/1:14,4:18:46.59:328,0,47	0/0:23,0:23:66.10:0,66,1482	0/0:33,0:33:90.23:0,90,2360	0/0:33,0:33:72.17:0,72,1209	0/0:30,0:29:84.25:0,84,1540	0/0:26,0:26:74.44:0,74,1235	0/0:38,0:38:99:0,108,2747	0/0:35,0:35:99:0,102,2548	0/0:23,0:23:63.14:0,63,1578	0/0:15,0:15:45.15:0,45,1107	0/0:40,0:37:86.86:0,87,1127	0/0:35,0:35:95.62:0,96,1276	0/0:21,0:21:53.91:0,54,644	0/0:33,0:33:87.14:0,87,1493	0/0:27,0:27:75.05:0,75,1684	0/0:27,0:27:78.24:0,78,1943	0/0:18,0:18:45.15:0,45,864	0/0:30,0:30:83.18:0,83,1816	0/0:28,0:26:80.27:0,80,1777	0/0:30,0:30:45.98:0,46,1236
chr10	11010574	.	AC	A	930.96	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=11.779;DP=784;FS=6.359;HRun=1;HaplotypeScore=116.1373;InbreedingCoeff=0.7750;MQ=59.50;MQ0=9;MQRankSum=-5.245;QD=7.45;ReadPosRankSum=2.059;VQSLOD=0.8767;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:31,0:30:59.91:355,60,0	0/0:3,0:3:8.84:0,9,70	0/0:30,1:14:32.17:0,32,372	0/0:28,2:15:6.87:0,7,192	0/1:35,0:35:0.89:1,0,115	1/1:23,1:24:44.07:306,44,0	1/1:18,0:18:31.09:205,31,0	0/0:39,1:39:37.47:0,37,418	1/1:16,1:17:28.18:221,28,0	0/0:25,1:26:39.02:0,39,663	0/0:33,0:33:85.35:0,85,849	0/0:33,0:33:23.35:0,23,240	0/0:29,0:28:2.90:0,3,71	0/0:26,0:26:7.38:0,7,107	0/0:37,0:37:99:0,101,979	0/0:37,0:37:99:0,103,1035	0/0:23,0:23:56.45:0,56,582	0/0:17,0:17:42.93:0,43,439	0/0:43,0:40:20.40:0,20,355	0/0:38,0:38:47.17:0,47,410	0/0:23,0:23:48.81:0,49,225	0/0:32,0:32:0.65:0,1,147	0/0:29,0:29:51.98:0,52,635	0/0:28,0:28:74.27:0,74,726	0/0:19,0:19:21.16:0,21,112	0/0:31,0:31:73.78:0,74,805	0/0:30,0:27:78.13:0,78,740	0/0:21,0:21:24.52:0,25,465
chr10	11010577	.	AAAAACAAAC	A	2910.16	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=9.798;DP=785;FS=0.996;HRun=0;HaplotypeScore=230.4044;InbreedingCoeff=0.8128;MQ=58.91;MQ0=9;MQRankSum=-8.232;QD=31.63;ReadPosRankSum=1.795;VQSLOD=3.3635;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:32,0:31:71.20:1027,71,0	0/0:4,0:4:12.04:0,12,323	0/0:30,0:15:38.12:0,38,710	0/0:27,0:15:8.86:0,9,537	0/0:35,0:35:90:0,90,2464	1/1:13,11:24:44.22:922,44,0	1/1:11,7:18:33.89:600,34,0	0/0:44,0:43:99:0,120,2876	0/1:18,0:18:24.57:511,0,25	0/0:25,0:25:67.26:0,67,2688	0/0:31,0:31:93.30:0,93,3317	0/0:32,0:32:78.05:0,78,2435	0/0:29,0:28:84.23:0,84,2906	0/0:27,0:27:75.15:0,75,2369	0/0:39,0:39:99:0,114,4309	0/0:36,0:36:99:0,105,3945	0/0:22,0:22:66.22:0,66,2569	0/0:17,0:17:48.16:0,48,1554	0/0:44,0:41:99:0,110,2867	0/0:36,0:36:99:0,102,3172	0/0:23,0:23:60.20:0,60,1830	0/0:32,0:32:88.83:0,89,3006	0/0:29,0:29:72.03:0,72,2388	0/0:29,0:29:87.28:0,87,3253	0/0:19,0:19:48.13:0,48,1619	0/0:32,0:32:89.98:0,90,3191	0/0:31,0:28:87.07:0,87,2568	0/0:20,0:20:59.37:0,59,1640
chr10	11010584	.	AAC	A	1476.34	PASS	AB=0.683;AC=4;AF=0.071;AN=56;BaseQRankSum=10.600;DP=756;FS=1.190;HRun=0;HaplotypeScore=120.8887;InbreedingCoeff=-0.0797;MQ=57.08;MQ0=7;MQRankSum=-9.881;QD=16.59;ReadPosRankSum=2.464;VQSLOD=3.9776;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:8,21:30:91.27:580,0,91	0/0:5,0:5:15.05:0,15,265	0/0:28,0:17:23.85:0,24,562	0/0:21,0:14:9.41:0,9,485	0/0:32,0:32:90.30:0,90,1526	0/1:15,8:23:38.71:446,0,39	0/1:13,5:18:99:253,0,132	0/0:43,0:42:99:0,123,2016	0/1:7,11:18:82.99:307,0,83	0/0:26,0:26:78.26:0,78,1424	0/0:29,0:29:87.28:0,87,1516	0/0:29,0:29:78.26:0,78,1360	0/0:29,0:28:84.25:0,84,1441	0/0:27,0:27:75.25:0,75,1328	0/0:37,0:37:99:0,111,2022	0/0:37,0:37:99:0,105,1875	0/0:21,0:21:63.22:0,63,1175	0/0:17,0:17:51.13:0,51,877	0/0:47,0:44:99:0,120,1973	0/0:32,0:32:96.31:0,96,1687	0/0:25,0:25:69.23:0,69,1194	0/0:33,0:33:96.31:0,96,1665	0/0:25,0:25:66.21:0,66,1118	0/0:28,0:28:81.26:0,81,1464	0/0:18,0:18:45.15:0,45,805	0/0:33,0:33:93.31:0,93,1702	0/0:26,0:24:72.24:0,72,1272	0/0:19,0:19:44.21:0,44,886
chr10	11010864	.	CTA	C	8018.25	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=2.793;DP=499;FS=10.813;HRun=0;HaplotypeScore=80.0979;InbreedingCoeff=0.9083;MQ=59.79;MQ0=20;MQRankSum=-2.477;QD=18.82;ReadPosRankSum=0.979;VQSLOD=4.3954;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:26:50.79:396,51,0	1/1:10,0:10:29.84:239,30,0	0/0:26,0:13:6.69:0,7,207	0/0:46,0:18:17.81:0,18,256	1/1:13,0:13:29.67:242,30,0	1/1:13,0:13:29.86:238,30,0	1/1:18,0:18:35.70:290,36,0	1/1:11,14:20:55.43:453,55,0	1/1:16,0:15:35.94:294,36,0	1/1:11,0:11:32.95:289,33,0	1/1:12,0:11:23.96:198,24,0	1/1:16,0:16:41.88:339,42,0	1/1:10,0:10:20.85:163,21,0	1/1:15,0:15:41.95:347,42,0	1/1:25,0:25:62.50:509,63,0	1/1:16,0:16:34.51:277,35,0	1/1:22,0:22:65.60:504,66,0	1/1:20,0:19:50.82:405,51,0	1/1:16,0:15:43.44:350,43,0	1/1:13,0:12:23.67:179,24,0	1/1:26,0:26:59.89:491,60,0	1/1:13,0:13:35.90:292,36,0	1/1:6,5:11:8.99:74,9,0	1/1:15,0:15:29.95:244,30,0	1/1:12,0:10:20.65:166,21,0	1/1:23,0:23:62.66:515,63,0	1/1:14,0:14:37.63:282,38,0	1/1:15,0:11:31.16:241,31,0
chr10	11011931	.	AT	A	1009.96	PASS	AB=0.824;AC=19;AF=0.339;AN=56;BaseQRankSum=3.313;DP=573;FS=0.862;HRun=15;HaplotypeScore=83.3338;InbreedingCoeff=0.1432;MQ=64.10;MQ0=5;MQRankSum=0.113;QD=3.03;ReadPosRankSum=2.776;VQSLOD=0.1034;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:11,17:30:12.89:291,0,13	0/0:4,0:4:11.95:0,12,96	0/0:12,0:9:0:0,0,0	0/0:10,0:7:16.89:0,17,102	1/1:3,0:20:32.57:94,33,0	1/1:4,12:17:34.50:217,35,0	1/1:4,11:19:34.43:196,34,0	0/1:24,7:33:65.49:65,0,255	0/1:6,9:15:25.19:107,0,25	0/1:19,2:22:9.55:10,0,186	0/1:22,2:28:12.44:12,0,175	0/0:14,0:17:33.59:0,34,216	0/0:10,0:13:11.56:0,12,70	0/0:11,0:11:20.55:0,21,141	0/1:17,1:18:2.12:2,0,221	0/1:17,4:21:38.23:38,0,173	0/0:25,1:27:23.29:0,23,334	0/1:20,2:22:3.44:3,0,231	0/1:26,3:30:50.48:50,0,237	0/1:18,3:22:17.96:18,0,211	0/0:15,0:15:23.84:0,24,199	0/0:12,2:28:5.86:0,6,198	0/1:14,5:19:38.89:39,0,163	0/0:35,1:36:39.32:0,39,464	1/1:6,0:14:14.22:41,14,0	0/0:16,1:24:28.35:0,28,288	0/0:21,1:21:21.90:0,22,350	0/0:12,3:15:10.64:0,11,203
chr10	11013130	.	C	CG	1744.31	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=10.095;DP=657;FS=6.016;HRun=0;HaplotypeScore=76.6891;InbreedingCoeff=0.9687;MQ=86.68;MQ0=0;MQRankSum=-2.739;QD=37.92;ReadPosRankSum=1.114;VQSLOD=3.8898;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,114,1577	0/0:7,0:7:21.07:0,21,293	0/0:23,0:23:62.97:0,63,794	0/0:22,0:22:60.19:0,60,811	1/1:1,28:29:72.25:1147,72,0	0/0:24,0:24:72.24:0,72,1007	0/0:26,0:26:78.24:0,78,1073	0/0:38,0:38:99:0,111,1523	0/0:25,0:25:75.25:0,75,1049	0/0:23,0:23:60.20:0,60,839	0/0:16,0:16:39.12:0,39,527	0/0:31,0:31:90.30:0,90,1256	0/0:20,0:20:60.16:0,60,785	0/0:19,0:19:57.18:0,57,781	0/0:35,0:35:99:0,105,1453	0/0:25,0:25:75.24:0,75,1031	0/0:26,0:26:78.22:0,78,1038	0/0:25,0:25:72.21:0,72,971	0/0:17,0:17:51.16:0,51,697	0/0:22,0:22:57.19:0,57,796	0/0:39,0:39:99:0,114,1557	0/0:13,0:13:36.12:0,36,495	0/0:29,0:29:84.27:0,84,1155	0/0:19,0:19:57.19:0,57,796	1/1:2,15:17:45.15:719,45,0	0/0:21,0:21:63.21:0,63,881	0/0:25,0:25:75.25:0,75,1048	0/0:3,0:3:9.02:0,9,109
chr10	11013509	.	CT	C	1922.88	PASS	AB=0.971;AC=9;AF=0.161;AN=56;BaseQRankSum=-6.493;DP=652;FS=6.169;HRun=7;HaplotypeScore=147.1683;InbreedingCoeff=0.9024;MQ=60.96;MQ0=9;MQRankSum=3.813;QD=16.16;ReadPosRankSum=-3.642;VQSLOD=1.5296;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:30.10:0,30,376	0/0:11,0:11:24.07:0,24,291	0/0:43,0:19:34.45:0,34,354	0/1:33,1:16:3.29:3,0,175	0/0:19,0:18:37.82:0,38,444	0/0:17,0:17:30.10:0,30,377	0/0:18,0:18:36.12:0,36,453	1/1:4,33:37:96.21:978,96,0	0/0:22,0:22:20.55:0,21,236	0/0:29,0:29:76.30:0,76,916	0/0:15,0:15:39.12:0,39,490	0/0:28,0:26:65.70:0,66,799	0/0:26,0:25:71.65:0,72,854	0/0:27,0:27:54.22:0,54,639	0/0:27,0:27:63.12:0,63,771	0/0:30,0:30:56.95:0,57,673	0/0:20,0:20:47.73:0,48,556	0/0:19,0:18:46.03:0,46,568	1/1:3,16:18:45.06:448,45,0	1/1:3,16:19:32.25:470,32,0	1/1:2,8:10:18.04:184,18,0	0/0:19,0:19:42.13:0,42,528	0/0:26,0:26:50.75:0,51,614	0/0:14,0:14:39.12:0,39,487	0/0:14,0:14:24.95:0,25,303	0/0:36,0:33:89.45:0,89,1082	0/0:26,0:25:68.11:0,68,813	0/0:19,0:19:57.18:0,57,716
chr10	11013531	.	T	TC	729.01	PASS	AB=0.852;AC=16;AF=0.286;AN=56;BaseQRankSum=0.436;DP=595;FS=11.232;HRun=0;HaplotypeScore=143.9429;InbreedingCoeff=-0.4011;MQ=46.39;MQ0=19;MQRankSum=-6.535;QD=2.14;ReadPosRankSum=-3.927;VQSLOD=1.2143;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:27.01:0,27,320	0/1:11,0:11:16.44:16,0,183	0/0:29,0:12:29.97:0,30,294	0/0:25,0:7:3.95:0,4,31	0/0:25,0:24:58.97:0,59,629	0/0:17,0:16:30.49:0,30,296	0/0:21,0:21:33.10:0,33,443	0/0:27,1:28:19.14:0,19,947	0/0:21,0:22:26.52:0,27,234	0/1:18,5:23:99:108,0,621	0/1:17,1:18:57.42:57,0,277	0/1:18,4:20:35.77:36,0,474	0/1:20,4:23:37.35:37,0,650	0/1:17,7:23:56.04:56,0,522	0/1:16,6:22:43.59:44,0,601	0/1:17,9:26:99:128,0,373	0/1:15,2:16:28.88:29,0,426	0/1:17,3:18:11.14:11,0,474	0/0:14,0:14:32.39:0,32,452	0/1:22,0:20:5.24:5,0,526	0/0:8,0:7:17.88:0,18,205	0/1:13,6:19:48.09:48,0,399	0/0:19,1:20:13.63:0,14,541	0/1:11,3:14:22.04:22,0,398	0/0:17,0:16:42.48:0,42,453	0/1:25,9:30:99:171,0,797	0/1:22,5:25:67.41:67,0,713	0/1:14,2:16:48.97:49,0,428
chr10	11013551	.	CTTTCTTTTTTTT	C	2128.77	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=-1.453;DP=576;FS=4.060;HRun=0;HaplotypeScore=212.1674;InbreedingCoeff=0.7117;MQ=46.87;MQ0=20;MQRankSum=-4.830;QD=13.65;ReadPosRankSum=1.591;VQSLOD=2.5881;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:4,28:33:21.05:493,21,0	0/0:9,0:9:9.03:0,9,318	0/0:9,0:5:11.76:0,12,130	0/1:16,0:4:1.39:1,0,35	0/0:22,0:21:15.88:0,16,949	1/1:2,18:22:33.03:869,33,0	1/1:6,15:22:14.97:304,15,0	0/0:28,0:27:70.07:0,70,1019	1/1:2,19:22:21.07:611,21,0	0/0:30,0:28:81.13:0,81,2097	0/0:20,0:20:35.95:0,36,630	0/0:24,0:22:60:0,60,1584	0/0:18,0:17:47.89:0,48,1504	0/0:25,0:23:54.17:0,54,1644	0/1:22,0:22:1.16:1,0,1416	0/0:23,0:23:33.55:0,34,792	0/0:19,0:18:44.89:0,45,1093	0/0:22,0:18:38.78:0,39,581	0/0:12,0:12:31.26:0,31,597	0/0:21,0:19:51.17:0,51,1595	0/0:6,0:5:9.01:0,9,117	0/0:20,0:20:50.99:0,51,1317	0/0:16,0:16:20.96:0,21,250	0/0:10,0:10:24.47:0,24,546	0/1:18,0:17:10.22:10,0,976	0/0:42,0:37:99:0,102,2404	0/0:28,0:25:67.71:0,68,1719	0/0:13,0:13:33.05:0,33,629
chr10	11013557	.	T	TTCTTTCTTTCTTTC	12195.70	PASS	AB=0.934;AC=31;AF=0.554;AN=56;BaseQRankSum=-9.527;DP=595;FS=22.610;HRun=0;HaplotypeScore=234.4635;InbreedingCoeff=0.3756;MQ=50.34;MQ0=19;MQRankSum=0.586;QD=28.36;ReadPosRankSum=3.696;VQSLOD=2.5233;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:6.67:0,7,290	1/1:9,0:10:8.50:240,8,0	0/0:15,0:7:14.08:0,14,70	0/0:17,0:6:9.01:0,9,49	0/0:21,0:20:39.65:0,40,555	0/0:24,0:23:19.62:0,20,676	0/0:17,0:17:10.92:0,11,136	0/1:24,0:23:21.63:22,0,152	0/0:22,0:22:19.61:0,20,281	1/1:31,0:30:54.47:1659,54,0	0/1:14,9:25:49.37:371,0,49	1/1:26,0:24:5.79:842,6,0	1/1:21,0:20:22.28:924,22,0	0/1:28,0:26:9.75:923,0,10	1/1:22,0:22:32.41:804,32,0	1/1:22,0:23:20.27:457,20,0	0/1:21,0:19:3.56:647,0,4	1/1:22,0:18:22.79:691,23,0	0/1:13,0:13:21.11:21,0,162	0/1:24,0:23:5.95:6,0,275	0/1:5,0:5:14.49:15,0,14	0/1:21,0:21:7.12:688,0,7	0/1:14,0:15:0.08:107,0,0	1/1:9,0:10:17.71:548,18,0	0/0:16,0:16:39.70:0,40,711	1/1:42,0:38:55.84:1671,56,0	1/1:28,0:25:8.41:1056,8,0	1/1:13,0:14:32.84:502,33,0
chr10	11013558	.	T	TCTTTCTTTCTTTC	11578.26	PASS	AB=0.921;AC=29;AF=0.518;AN=56;BaseQRankSum=-7.703;DP=593;FS=28.152;HRun=0;HaplotypeScore=220.9417;InbreedingCoeff=0.1506;MQ=51.31;MQ0=19;MQRankSum=-3.131;QD=25.34;ReadPosRankSum=5.021;VQSLOD=2.5639;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:33:1.83:2,0,272	0/1:3,6:11:9.08:232,0,9	0/0:18,0:8:12.29:0,12,75	0/0:17,0:6:10.99:0,11,53	0/0:21,0:20:45.95:0,46,632	0/1:23,0:23:9:9,0,612	0/0:17,0:17:6.04:0,6,120	0/1:23,0:22:19.77:20,0,181	0/0:22,0:22:17.14:0,17,246	1/1:30,0:30:19.99:1610,20,0	0/1:20,0:22:82.63:347,0,83	0/1:26,0:25:5.74:832,0,6	1/1:20,0:20:29.32:932,29,0	0/1:28,0:26:1.22:923,0,1	0/1:21,0:22:2.28:781,0,2	1/1:16,0:23:3.43:388,3,0	0/1:22,0:20:14.14:635,0,14	1/1:20,0:17:22.50:516,23,0	0/1:12,0:12:16.96:17,0,210	0/0:25,0:23:26.11:0,26,379	0/1:5,0:4:14.24:14,0,18	0/1:21,0:21:5.18:690,0,5	0/1:5,0:14:1.83:109,0,2	1/1:10,0:10:15.51:528,16,0	0/0:16,0:16:42.29:0,42,730	1/1:41,0:38:1.72:1520,2,0	1/1:28,0:25:10.40:991,10,0	1/1:13,0:14:14.66:483,15,0
chr10	11014036	.	G	GGAGA	15995.45	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=3.341;DP=511;FS=2.276;HRun=0;HaplotypeScore=179.5596;InbreedingCoeff=0.9852;MQ=67.23;MQ0=0;MQRankSum=-7.474;QD=44.81;ReadPosRankSum=3.055;VQSLOD=5.0515;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:45.15:0,45,779	1/1:4,9:14:32.90:766,33,0	0/0:40,0:27:31.70:0,32,507	0/0:45,0:29:14.43:0,14,431	1/1:8,14:22:29.62:690,30,0	0/0:14,0:14:27.09:0,27,465	0/0:20,0:20:48.15:0,48,806	1/1:5,7:12:23.93:353,24,0	0/0:14,0:14:33.03:0,33,541	1/1:2,9:12:29.86:622,30,0	1/1:0,14:14:30.10:756,30,0	1/1:5,18:23:36.12:911,36,0	1/1:4,12:16:33.11:816,33,0	1/1:2,15:17:41.66:1063,42,0	1/1:5,18:23:51.18:1292,51,0	1/1:6,8:14:24.08:597,24,0	1/1:5,11:16:27.09:684,27,0	1/1:4,8:13:20.86:469,21,0	1/1:8,7:15:25.88:657,26,0	1/1:1,10:11:22.96:605,23,0	1/1:3,9:12:12.04:304,12,0	1/1:2,9:11:27.09:681,27,0	1/1:5,11:16:21.92:466,22,0	1/1:4,15:19:30.10:760,30,0	1/1:5,18:24:45.15:1123,45,0	1/1:8,13:22:44.62:848,45,0	1/1:3,10:16:38.92:922,39,0	1/1:3,10:13:24.08:609,24,0
chr10	11014079	.	G	GTCCCGGGGCTTGTC	26102.27	PASS	AB=0.910;AC=51;AF=0.911;AN=56;BaseQRankSum=-5.129;DP=347;FS=14.304;HRun=0;HaplotypeScore=472.5211;InbreedingCoeff=-0.1173;MQ=54.88;MQ0=0;MQRankSum=0.302;QD=75.22;ReadPosRankSum=-1.878;VQSLOD=4.0948;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:11:10.41:441,10,0	1/1:13,0:13:25.89:1210,26,0	0/1:4,0:6:26.10:529,0,26	0/1:6,1:8:22.44:486,0,22	1/1:19,0:19:16.34:721,16,0	0/1:6,0:6:5.35:309,0,5	1/1:10,0:10:28.33:1162,28,0	1/1:16,0:16:45.15:2078,45,0	0/1:12,0:12:12.31:608,0,12	1/1:13,0:13:8.95:798,9,0	1/1:13,0:13:7.53:768,8,0	1/1:20,0:20:39.37:1620,39,0	1/1:11,0:11:17.14:946,17,0	1/1:18,0:18:29.26:1198,29,0	1/1:21,0:21:16.40:2129,16,0	1/1:26,0:26:4.91:568,5,0	1/1:8,0:6:5.23:236,5,0	0/1:4,0:4:12.17:347,0,12	1/1:6,0:6:18.06:1097,18,0	1/1:10,0:10:15.01:613,15,0	1/1:6,0:5:6.02:239,6,0	1/1:9,0:9:12.51:562,13,0	1/1:17,0:17:33.17:986,33,0	1/1:10,0:10:20.49:1001,20,0	1/1:16,0:16:36.60:1608,37,0	1/1:15,0:14:38.27:1246,38,0	1/1:14,0:14:33.96:1848,34,0	1/1:9,0:9:15.94:749,16,0
chr10	11015773	.	TA	T	4503.56	PASS	AB=0.892;AC=34;AF=0.607;AN=56;BaseQRankSum=-7.006;DP=595;FS=10.197;HRun=14;HaplotypeScore=84.5145;InbreedingCoeff=0.5412;MQ=67.70;MQ0=2;MQRankSum=1.613;QD=10.35;ReadPosRankSum=4.094;VQSLOD=3.6861;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:10,24:35:43.54:445,44,0	1/1:2,2:4:5.93:41,6,0	0/0:16,0:11:3.87:0,4,26	0/0:19,0:15:1.96:0,2,39	0/0:19,1:19:10.69:0,11,230	1/1:5,17:23:43.59:294,44,0	1/1:4,11:16:34.75:232,35,0	0/1:31,1:31:23.03:23,0,92	1/1:5,19:24:37.73:334,38,0	1/1:8,13:23:14.85:230,15,0	1/1:10,13:22:16.07:214,16,0	0/0:15,0:15:18.02:0,18,95	0/0:17,0:16:5.70:0,6,43	0/0:17,0:17:10.98:0,11,64	1/1:7,26:33:43.49:445,43,0	1/1:6,13:19:29.68:205,30,0	1/1:7,29:36:74.32:514,74,0	1/1:13,19:32:8.47:319,8,0	0/1:21,0:21:31.61:32,0,51	0/0:26,0:26:6.69:0,7,103	0/0:7,0:7:2.87:0,3,32	0/1:12,0:12:18.46:18,0,44	1/1:5,12:17:11.66:149,12,0	1/1:7,18:26:51.39:340,51,0	0/0:20,0:22:47.85:0,48,418	1/1:6,16:22:35.52:246,36,0	1/1:5,17:22:20.03:281,20,0	0/1:5,8:15:21.83:142,0,22
chr10	11015785	.	A	AAG	3566.03	PASS	AB=0.970;AC=20;AF=0.357;AN=56;BaseQRankSum=-8.150;DP=623;FS=5.262;HRun=0;HaplotypeScore=108.9339;InbreedingCoeff=0.6614;MQ=65.46;MQ0=5;MQRankSum=3.948;QD=15.44;ReadPosRankSum=-3.132;VQSLOD=2.5259;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:43.37:0,43,567	0/0:4,0:4:8.95:0,9,68	0/0:21,0:10:6.65:0,7,64	0/0:18,0:10:12.23:0,12,82	0/0:23,0:22:54.85:0,55,548	0/0:22,0:22:33:0,33,336	0/0:16,0:16:47.62:0,48,339	1/1:10,19:30:17.58:624,18,0	0/0:23,0:23:45.90:0,46,409	0/0:31,0:31:83.51:0,84,667	0/1:21,0:22:0.70:1,0,258	1/1:1,14:16:32.82:490,33,0	1/1:2,14:15:17.63:283,18,0	1/1:2,16:18:23.80:378,24,0	0/0:35,0:35:89.34:0,89,656	0/0:19,0:19:38.68:0,39,278	0/0:34,0:34:43.61:0,44,495	0/0:32,0:32:18.33:0,18,461	1/1:3,12:17:27.65:479,28,0	1/1:3,19:23:20.33:593,20,0	1/1:1,8:10:14.94:206,15,0	1/1:1,17:18:47.47:469,47,0	0/1:21,0:21:15.34:15,0,231	0/1:24,0:25:5.79:6,0,296	0/0:26,0:26:59.95:0,60,640	0/0:28,0:28:6.39:0,6,388	0/0:25,0:25:0.96:0,1,339	0/1:13,0:13:22.86:23,0,206
chr10	11016596	.	C	CA	1565.23	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=5.789;DP=555;FS=1.842;HRun=8;HaplotypeScore=58.2394;InbreedingCoeff=0.9955;MQ=75.48;MQ0=0;MQRankSum=-2.334;QD=22.68;ReadPosRankSum=1.133;VQSLOD=4.1723;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:75.03:0,75,686	0/0:15,0:15:36.01:0,36,329	0/0:16,0:15:26.97:0,27,234	0/0:10,0:10:26.90:0,27,223	0/0:38,0:38:99:0,99,906	0/0:25,0:25:69.02:0,69,626	0/0:12,0:12:30:0,30,269	0/0:28,0:28:69.01:0,69,632	0/0:16,0:16:45.02:0,45,412	0/0:22,0:22:48.02:0,48,439	0/0:21,0:21:57.03:0,57,522	1/1:4,21:25:54.16:617,54,0	1/1:2,11:13:24.07:277,24,0	1/1:2,10:12:24.07:277,24,0	0/0:25,0:25:69.02:0,69,627	0/0:20,0:20:60.03:0,60,549	0/0:19,0:19:42.01:0,42,384	0/0:19,0:19:54.03:0,54,494	0/0:16,0:16:36.01:0,36,330	0/0:23,0:23:66.04:0,66,604	0/0:13,0:13:27.01:0,27,247	1/1:2,17:19:48.14:554,48,0	0/0:23,0:23:63.02:0,63,572	0/0:19,0:19:51.03:0,51,467	0/0:23,0:23:57.02:0,57,521	0/0:22,0:22:60.03:0,60,549	0/0:24,0:24:57.02:0,57,520	0/0:10,0:10:18.01:0,18,165
chr10	11016800	.	G	GTCTCTCTCT	2809.40	PASS	AB=0.967;AC=27;AF=0.540;AN=50;BaseQRankSum=4.851;DP=580;FS=3.028;HRun=0;HaplotypeScore=248.4277;InbreedingCoeff=-0.0837;MQ=41.29;MQ0=80;MQRankSum=-2.597;QD=8.21;ReadPosRankSum=6.036;VQSLOD=2.0139;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:20:2.98:0,3,23	0/1:10,0:9:9.07:59,0,9	0/0:68,0:11:27.09:0,27,691	0/0:65,0:15:25.74:0,26,572	0/1:18,0:18:17.56:20,0,18	0/1:12,0:12:4.58:5,0,19	0/0:13,0:10:3.94:0,4,28	0/1:27,0:26:36.58:176,0,37	0/1:20,0:20:12.46:24,0,12	1/1:26,0:25:45.95:795,46,0	0/0:12,0:11:3.01:0,3,57	1/1:15,0:15:9.03:135,9,0	./.	1/1:3,0:11:0.47:1,0,0	0/1:31,0:28:11.38:11,0,53	0/1:33,0:31:62.94:70,0,63	0/1:28,0:26:88.48:266,0,88	1/1:13,0:15:0.45:402,0,0	0/1:6,0:14:28.33:172,0,28	1/1:8,0:8:0.66:2,1,0	./.	1/1:2,1:12:2.75:47,3,0	1/1:15,0:10:2.90:16,3,0	0/0:21,0:18:5.83:0,6,111	./.	1/1:19,0:16:20.77:512,21,0	0/1:19,0:17:34.70:229,0,35	0/1:7,0:6:14.57:15,0,94
chr10	11016803	.	TGTCACA	T	209.46	PASS	AB=0.947;AC=11;AF=0.220;AN=50;BaseQRankSum=2.442;DP=537;FS=25.281;HRun=0;HaplotypeScore=180.3475;InbreedingCoeff=-0.0104;MQ=40.33;MQ0=79;MQRankSum=-1.289;QD=1.22;ReadPosRankSum=-1.131;VQSLOD=0.7374;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:18:3.01:0,3,46	0/0:10,0:9:2.54:0,3,42	0/0:66,0:10:26.83:0,27,334	0/0:64,0:15:27.08:0,27,421	0/0:18,0:18:8.79:0,9,114	0/0:11,0:11:4.55:0,5,29	0/0:13,0:10:3.30:0,3,49	0/0:24,0:23:37.49:0,37,560	0/0:19,0:19:6.01:0,6,69	0/1:27,0:25:19.73:20,0,383	1/1:10,2:11:2.22:7,2,0	0/0:14,0:14:3.63:0,4,14	0/0:4,0:4:0:0,0,0	0/0:5,0:4:0.47:0,0,1	0/0:26,2:26:17.10:0,17,114	0/1:20,10:28:1.76:2,0,19	0/1:26,0:26:46.78:47,0,51	0/1:14,0:14:30.38:30,0,120	0/1:15,0:15:54.43:54,0,248	0/0:7,0:7:2.74:0,3,12	./.	./.	0/0:15,0:10:2.50:0,2,9	1/1:21,0:18:4.26:15,4,0	./.	0/0:17,0:14:41.62:0,42,361	0/1:17,1:16:74:74,0,194	0/1:7,0:6:83.33:83,0,111
chr10	11016804	.	G	GTCTGTC	4457.01	PASS	AB=1.000;AC=35;AF=0.729;AN=48;BaseQRankSum=2.341;DP=533;FS=6.915;HRun=0;HaplotypeScore=216.0564;InbreedingCoeff=0.5716;MQ=39.67;MQ0=79;MQRankSum=0.990;QD=14.96;ReadPosRankSum=-0.563;VQSLOD=3.4631;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	1/1:10,0:9:7.91:104,8,0	0/0:65,0:9:23.93:0,24,302	0/0:64,0:15:18.60:0,19,273	1/1:17,0:17:5.46:49,5,0	1/1:4,6:10:3.01:75,3,0	0/0:13,0:10:0.14:0,0,1	1/1:22,0:21:46.46:524,46,0	1/1:9,6:18:12.04:301,12,0	1/1:27,0:25:69.60:866,70,0	0/0:12,0:11:1.25:0,1,3	1/1:14,0:14:9.03:116,9,0	0/0:4,0:4:0:0,0,0	0/1:5,0:4:0:1,0,0	1/1:27,0:24:6.94:62,7,0	1/1:29,0:27:7.72:147,8,0	1/1:28,0:26:23.65:410,24,0	1/1:13,0:13:32.47:420,32,0	1/1:15,0:15:35.41:365,35,0	1/1:7,0:7:3.85:22,4,0	./.	./.	1/1:15,0:10:2.97:25,3,0	0/0:21,0:18:0.40:0,0,3	./.	1/1:17,0:14:39.13:560,39,0	1/1:17,0:15:30.18:357,30,0	1/1:7,0:6:7.05:53,7,0
chr10	11016805	.	TCA	T	308.12	PASS	AB=0.951;AC=23;AF=0.639;AN=36;BaseQRankSum=-0.705;DP=502;FS=0.000;HRun=0;HaplotypeScore=162.5343;InbreedingCoeff=0.1760;MQ=37.92;MQ0=79;MQRankSum=-0.548;QD=1.31;ReadPosRankSum=-0.705;VQSLOD=2.5319;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	1/1:9,1:9:3.01:32,3,0	./.	./.	0/1:14,3:17:0:0,0,0	0/0:9,0:9:1.82:0,2,5	0/1:12,0:9:0:0,0,0	./.	0/0:16,0:16:2.68:0,3,11	1/1:26,1:25:3.01:31,3,0	1/1:10,2:11:3.01:32,3,0	./.	0/0:4,0:4:0.47:0,0,1	0/0:6,0:5:0:0,0,0	1/1:24,4:25:0.47:1,0,0	1/1:27,2:27:3.01:32,3,0	0/1:25,2:26:12.14:37,0,12	1/1:12,1:13:3.01:31,3,0	0/1:12,0:12:16.61:17,0,33	0/1:3,0:3:0:0,0,0	./.	./.	./.	1/1:17,4:18:6.02:64,6,0	./.	./.	1/1:15,2:15:5.68:62,6,0	1/1:5,2:6:6.01:63,6,0
chr10	11020967	.	CCTAT	C	5444.30	PASS	AC=24;AF=0.462;AN=52;BaseQRankSum=-0.549;DP=673;FS=0.000;HRun=0;HaplotypeScore=134.7405;InbreedingCoeff=0.9031;MQ=69.42;MQ0=6;MQRankSum=4.377;QD=18.71;ReadPosRankSum=2.687;VQSLOD=4.6725;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:24.06:0,24,348	1/1:6,3:9:9.03:139,9,0	./.	./.	0/0:20,0:33:26.95:0,27,369	0/0:24,0:24:18.06:0,18,297	0/0:15,0:14:2.99:0,3,38	0/0:43,0:43:12.04:0,12,183	0/0:15,0:15:18.06:0,18,294	1/1:19,16:35:48.16:733,48,0	1/1:13,6:19:12.04:185,12,0	0/0:21,0:20:45.15:0,45,1028	0/0:27,0:27:36.12:0,36,815	0/0:21,0:21:36.12:0,36,836	1/1:11,18:28:36.12:556,36,0	1/1:12,23:35:51.17:787,51,0	1/1:9,11:20:11.42:184,11,0	1/1:13,7:20:18.95:280,19,0	0/0:19,0:24:10.87:0,11,183	0/0:13,0:34:21:0,21,253	0/0:20,0:20:6.02:0,6,95	0/0:13,0:26:32.14:0,32,523	1/1:16,17:33:39.13:602,39,0	1/1:5,4:9:15.05:231,15,0	0/0:14,0:22:12.03:0,12,156	1/1:16,14:30:45.15:682,45,0	1/1:11,31:42:63.21:972,63,0	1/1:5,5:10:6.02:93,6,0
chr10	11020970	.	A	ATCTATCTG	3712.40	PASS	AB=1.000;AC=14;AF=0.250;AN=56;BaseQRankSum=-0.981;DP=663;FS=7.793;HRun=0;HaplotypeScore=187.9099;InbreedingCoeff=0.4092;MQ=66.36;MQ0=6;MQRankSum=-5.398;QD=15.60;ReadPosRankSum=-1.059;VQSLOD=1.9051;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:22:11.07:260,11,0	0/0:9,0:9:18.02:0,18,242	0/0:13,0:10:18.04:0,18,200	0/0:15,0:15:19.94:0,20,251	0/1:34,0:34:99:560,0,284	1/1:3,21:26:18.06:774,18,0	1/1:15,0:14:32.62:310,33,0	0/0:43,0:43:26.72:0,27,677	1/1:14,0:14:18.05:205,18,0	0/0:33,0:33:75.12:0,75,913	0/0:19,0:19:44.67:0,45,471	0/0:21,0:20:57.12:0,57,1223	0/0:27,0:27:57.07:0,57,1039	0/0:20,0:20:57.06:0,57,1131	0/0:29,0:28:63.06:0,63,929	0/0:33,0:33:72.11:0,72,1158	0/0:20,0:20:15.62:0,16,396	0/0:21,0:21:46.97:0,47,608	0/1:25,0:24:99:379,0,281	0/1:35,0:35:99:667,0,240	0/1:19,0:19:21.62:22,0,124	0/1:27,0:26:63.88:64,0,194	0/0:32,0:32:69.06:0,69,944	0/0:9,0:9:17.19:0,17,295	0/1:21,0:21:99:472,0,202	0/0:29,0:29:71.27:0,71,909	0/0:41,0:41:89.99:0,90,1329	0/0:11,0:11:17.99:0,18,221
chr10	11020974	.	A	ATCTG	2117.38	PASS	AB=1.000;AC=14;AF=0.250;AN=56;BaseQRankSum=1.701;DP=666;FS=5.808;HRun=0;HaplotypeScore=145.5770;InbreedingCoeff=0.3989;MQ=65.25;MQ0=7;MQRankSum=-1.271;QD=8.75;ReadPosRankSum=2.437;VQSLOD=2.6567;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,22:29:8.07:493,8,0	0/0:9,0:9:18.02:0,18,181	0/0:11,0:8:18.04:0,18,200	0/0:14,0:14:19.83:0,20,250	0/1:33,0:33:78.73:79,0,310	1/1:24,0:24:18.06:352,18,0	1/1:14,0:13:14.49:274,14,0	0/0:43,0:43:99:0,110,913	1/1:0,14:15:18.06:485,18,0	0/0:35,0:35:79.45:0,79,802	0/0:19,0:19:44.99:0,45,407	0/0:20,0:19:57.12:0,57,917	0/0:23,0:23:57.07:0,57,811	0/0:20,0:20:57.06:0,57,844	0/0:30,0:29:66.04:0,66,661	0/0:33,0:33:72.13:0,72,776	0/0:21,0:20:15.61:0,16,289	0/0:22,0:22:53.89:0,54,499	0/1:25,0:24:30.34:30,0,372	0/1:35,0:35:99:150,0,243	0/1:20,0:20:18.65:19,0,141	0/1:27,0:26:99:348,0,192	0/0:31,0:31:72.55:0,73,734	0/0:9,0:9:23.99:0,24,233	0/1:20,0:20:63.31:63,0,208	0/0:27,0:27:76.66:0,77,744	0/0:47,0:47:99:0,102,1031	0/0:10,0:10:17.99:0,18,168
chr10	11022607	.	C	CT	1745.55	PASS	AB=0.857;AC=19;AF=0.339;AN=56;BaseQRankSum=2.643;DP=498;FS=2.215;HRun=11;HaplotypeScore=79.0563;InbreedingCoeff=0.4946;MQ=60.94;MQ0=4;MQRankSum=0.045;QD=7.59;ReadPosRankSum=-0.504;VQSLOD=2.3245;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:41,3:44:59.05:0,59,639	0/0:4,0:4:5.72:0,6,35	0/1:7,0:4:0:0,0,0	0/0:9,0:7:2.71:0,3,12	0/0:29,0:29:52.63:0,53,392	0/0:10,0:11:20.90:0,21,162	0/1:21,2:23:13.15:13,0,269	0/1:18,12:26:4.50:290,0,4	0/0:7,0:7:14.92:0,15,114	0/0:22,1:21:11.40:0,11,264	0/1:13,1:14:9.59:10,0,118	1/1:4,15:20:20.40:360,20,0	1/1:3,7:10:18.03:182,18,0	1/1:8,13:21:20.97:206,21,0	0/0:12,0:14:30.95:0,31,221	0/1:24,2:26:4.15:4,0,336	0/0:25,0:25:46.49:0,46,506	0/0:13,0:13:29.81:0,30,225	1/1:4,10:13:6.79:237,7,0	1/1:3,10:13:21.93:215,22,0	1/1:6,11:18:23.21:268,23,0	0/1:4,8:15:8.90:116,0,9	0/0:11,0:12:19.92:0,20,145	0/0:16,0:16:44.83:0,45,348	0/0:17,0:17:32.80:0,33,254	0/1:15,2:18:29:29,0,158	0/0:20,0:20:32.62:0,33,243	0/0:21,0:20:26.70:0,27,199
chr10	11022707	.	C	CT	4871.10	PASS	AB=0.615;AC=33;AF=0.589;AN=56;BaseQRankSum=-10.415;DP=410;FS=4.759;HRun=11;HaplotypeScore=50.4294;InbreedingCoeff=0.8651;MQ=66.08;MQ0=1;MQRankSum=1.067;QD=19.41;ReadPosRankSum=2.033;VQSLOD=6.0149;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,27:31:69.14:700,69,0	1/1:1,3:4:9.02:91,9,0	1/1:10,0:6:4.87:17,5,0	0/0:10,0:6:2.84:0,3,15	0/0:19,0:19:35.64:0,36,274	1/1:4,12:16:15.84:342,16,0	1/1:1,10:11:3.80:214,4,0	0/0:6,0:21:30.10:0,30,87	1/1:3,8:11:21.04:213,21,0	1/1:3,10:13:30.04:297,30,0	1/1:4,10:14:17.92:158,18,0	0/0:18,0:18:41.81:0,42,325	0/0:10,0:10:17.91:0,18,139	0/0:14,0:14:38.81:0,39,293	1/1:2,7:9:21.04:213,21,0	1/1:3,18:21:45.09:457,45,0	1/1:7,15:22:47.09:453,47,0	0/1:6,10:16:2.20:162,0,2	0/0:0,0:18:37.83:0,38,115	0/0:2,0:18:24.43:0,24,71	0/0:1,0:9:12.22:0,12,35	0/0:9,0:9:17.90:0,18,136	1/1:4,9:13:20.83:198,21,0	1/1:0,8:8:12.02:122,12,0	0/0:13,0:13:26.82:0,27,203	1/1:4,16:20:45.05:442,45,0	1/1:2,15:17:42.08:426,42,0	1/1:1,14:15:36.07:365,36,0
chr10	11023108	.	TTA	T	983.17	PASS	AB=0.728;AC=13;AF=0.232;AN=56;BaseQRankSum=10.302;DP=454;FS=46.777;HRun=0;HaplotypeScore=126.4680;InbreedingCoeff=-0.3217;MQ=27.36;MQ0=65;MQRankSum=-6.304;QD=4.22;ReadPosRankSum=1.749;VQSLOD=0.9886;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:16:33.03:0,33,587	0/1:9,5:12:58.41:58,0,342	0/0:6,0:4:12.02:0,12,206	0/0:6,0:5:12.04:0,12,204	0/1:11,11:22:99:103,0,274	0/0:21,0:17:33.11:0,33,667	0/0:24,0:14:33.11:0,33,669	0/0:18,0:2:3.01:0,3,61	0/0:7,0:5:9.03:0,9,182	0/1:10,6:13:99:262,0,213	0/1:9,5:13:11.68:12,0,314	0/0:18,0:11:21.07:0,21,416	0/0:17,0:15:36.12:0,36,708	0/0:13,0:10:27.09:0,27,547	0/1:7,6:11:16.91:17,0,223	0/1:10,7:12:32.15:32,0,162	0/1:23,4:15:69.78:70,0,396	0/1:18,6:16:99:155,0,511	0/0:9,0:2:6.02:0,6,122	0/0:3,0:3:9.03:0,9,112	0/0:15,0:2:6.02:0,6,72	0/0:8,0:6:12.04:0,12,219	0/1:8,10:18:26.29:26,0,311	0/0:27,5:27:35.58:0,36,902	0/1:14,8:22:1.28:1,0,471	0/1:10,6:11:99:214,0,274	0/1:3,9:9:52.86:80,0,53	0/1:15,3:16:98.68:99,0,432
chr10	11023124	.	C	CCCCA	4712.13	PASS	AB=0.745;AC=14;AF=0.250;AN=56;BaseQRankSum=9.887;DP=441;FS=51.733;HRun=0;HaplotypeScore=128.6612;InbreedingCoeff=-0.3500;MQ=29.38;MQ0=36;MQRankSum=-7.720;QD=19.08;ReadPosRankSum=3.518;VQSLOD=2.1620;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:17:27.09:0,27,565	0/1:10,4:12:99:230,0,302	0/0:12,0:10:27.05:0,27,523	0/0:12,0:11:30.10:0,30,619	0/1:11,11:22:93.58:490,0,94	0/0:19,0:16:30.10:0,30,628	0/0:24,0:15:33.11:0,33,691	0/0:16,0:1:3:0,3,25	0/0:8,0:7:12.04:0,12,251	0/1:10,5:13:99:297,0,149	0/1:9,3:11:99:197,0,165	0/0:17,0:13:24.08:0,24,488	0/0:21,0:19:42.14:0,42,855	0/0:15,0:13:33.11:0,33,678	0/1:8,5:11:99:313,0,165	0/1:10,7:12:99:460,0,158	0/1:18,4:14:99:237,0,351	0/1:16,6:16:99:345,0,520	0/0:6,0:2:6.02:0,6,126	0/0:6,0:6:15.15:0,15,239	0/0:8,0:3:7.58:0,8,129	0/0:9,0:7:15.05:0,15,314	0/1:9,8:17:99:523,0,213	0/1:25,5:26:99:251,0,822	0/1:14,8:22:99:319,0,281	0/1:8,6:10:99:299,0,224	0/1:3,9:9:11.78:492,0,12	0/1:10,3:14:99:258,0,104
chr10	11023134	.	C	CCCCTGTT	5542.63	PASS	AB=0.706;AC=10;AF=0.185;AN=54;BaseQRankSum=-7.263;DP=536;FS=17.465;HRun=0;HaplotypeScore=206.6922;InbreedingCoeff=0.4849;MQ=33.73;MQ0=27;MQRankSum=-8.017;QD=54.88;ReadPosRankSum=0.301;VQSLOD=3.4999;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:28:20.24:0,20,987	0/0:16,0:14:35.85:0,36,669	0/0:14,0:11:33.11:0,33,901	0/0:19,0:14:42.14:0,42,1145	0/0:25,0:25:31.18:0,31,570	0/0:28,0:24:50.98:0,51,1018	0/0:36,0:29:62.82:0,63,1362	./.	0/0:13,0:12:28.20:0,28,546	0/0:17,0:15:33.03:0,33,505	0/0:11,0:10:22.52:0,23,417	0/1:12,7:17:99:821,0,215	0/1:13,9:22:99:1542,0,355	0/1:10,10:19:99:1565,0,118	0/0:19,0:17:42.02:0,42,696	0/0:20,0:15:36.03:0,36,599	0/0:26,0:21:34.43:0,34,804	0/0:22,0:18:51.06:0,51,962	1/1:4,3:4:12.04:423,12,0	1/1:0,6:6:17.98:542,18,0	1/1:8,4:5:11.95:291,12,0	0/1:7,3:8:99:359,0,226	0/0:17,0:17:28.28:0,28,562	0/0:39,0:35:71.06:0,71,1393	0/0:22,0:22:25.95:0,26,576	0/0:19,0:15:35.95:0,36,543	0/0:13,0:10:26.83:0,27,282	0/0:14,0:13:26.04:0,26,296
chr10	11023614	.	GTGGTGTGTGTGTGTGTAT	G	15305.80	PASS	AB=0.968;AC=17;AF=0.304;AN=56;BaseQRankSum=15.749;DP=675;FS=1.663;HRun=0;HaplotypeScore=320.0179;InbreedingCoeff=-0.4349;MQ=52.55;MQ0=15;MQRankSum=-12.402;QD=47.39;ReadPosRankSum=6.467;VQSLOD=2.9443;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:38,2:40:77.58:1579,0,78	0/1:10,0:10:43.72:632,0,44	0/0:52,0:22:66.06:0,66,1729	0/0:52,0:24:63.51:0,64,2776	0/1:15,0:14:55.62:192,0,56	0/1:27,0:27:32.79:2294,0,33	0/1:23,0:22:99:473,0,214	0/0:22,0:21:30.60:0,31,2014	0/1:21,0:21:66.78:1636,0,67	0/1:20,0:16:50.07:1138,0,50	0/1:6,0:6:50.70:121,0,51	0/0:27,0:25:66.09:0,66,4455	0/0:30,0:30:72.23:0,72,4950	0/0:28,0:28:75.20:0,75,4822	0/1:30,0:30:99:1781,0,157	0/1:24,0:24:99:1213,0,121	0/1:22,0:22:99:748,0,201	0/1:11,0:11:99:479,0,106	0/0:31,0:28:34.84:0,35,1763	0/0:14,0:15:29.90:0,30,1448	0/0:71,0:71:99:0,148,8713	0/0:19,0:19:45.37:0,45,2922	0/1:10,2:11:36.90:405,0,37	0/1:17,0:17:99:110,0,104	0/1:10,0:10:13.91:633,0,14	0/1:8,10:18:41.03:748,0,41	0/1:17,0:16:69.80:1123,0,70	0/0:4,0:4:8.96:0,9,69
chr10	11023615	.	TGGTGTGTGTGTGTGTATG	T	18243.63	PASS	AB=0.750;AC=33;AF=0.611;AN=54;BaseQRankSum=12.872;DP=636;FS=5.212;HRun=0;HaplotypeScore=293.2347;InbreedingCoeff=0.8684;MQ=52.30;MQ0=15;MQRankSum=-11.736;QD=61.84;ReadPosRankSum=2.326;VQSLOD=3.6729;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:13,14:27:39.13:1834,39,0	1/1:4,6:10:15.05:741,15,0	0/0:52,0:22:33.58:0,34,1224	0/0:54,0:25:42.14:0,42,2456	1/1:6,6:11:10.39:264,10,0	1/1:8,18:26:54.19:2672,54,0	1/1:14,9:22:12.04:594,12,0	0/0:22,0:21:15.85:0,16,1819	1/1:6,15:21:39.13:1930,39,0	1/1:4,13:13:30.09:1360,30,0	0/1:2,1:3:15.92:142,0,16	0/0:27,0:25:60.21:0,60,4280	0/0:31,0:31:69.22:0,69,4767	0/0:27,0:27:66.23:0,66,4586	1/1:12,17:29:45.15:2132,45,0	1/1:8,16:24:30.10:1451,30,0	1/1:14,8:22:21.07:934,21,0	1/1:6,5:11:12.04:594,12,0	0/0:27,0:24:30.10:0,30,1425	0/0:12,0:12:21.07:0,21,1343	0/0:68,0:68:99:0,122,8211	0/0:18,0:18:39.61:0,40,2869	1/1:4,6:9:10.21:456,10,0	1/1:11,6:17:3.01:148,3,0	1/1:2,7:9:15.05:742,15,0	1/1:14,3:17:27.07:938,27,0	1/1:7,10:17:27.09:1313,27,0	./.
chr10	11023616	.	GGT	G	1428.57	PASS	AB=0.990;AC=29;AF=0.537;AN=54;BaseQRankSum=10.126;DP=636;FS=6.472;HRun=0;HaplotypeScore=187.7934;InbreedingCoeff=-0.3859;MQ=52.32;MQ0=16;MQRankSum=-9.715;QD=2.86;ReadPosRankSum=-0.475;VQSLOD=2.2309;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:27:0.07:121,0,0	0/1:10,0:10:3.05:47,0,3	0/0:54,0:23:36.89:0,37,487	0/0:53,1:25:45.14:0,45,659	0/1:12,0:11:7.80:8,0,29	1/1:25,1:26:6.94:190,7,0	0/1:21,0:20:29.29:29,0,123	0/1:22,0:21:76.67:77,0,85	0/1:21,0:21:73.11:125,0,73	1/1:17,0:13:1.27:91,1,0	0/1:3,0:3:28.78:37,0,29	0/1:26,1:25:16.99:17,0,249	0/1:31,0:31:40.12:40,0,254	0/0:26,0:26:10.40:0,10,282	0/1:29,0:29:49.10:136,0,49	0/1:24,0:24:81.09:81,0,107	0/1:22,0:22:50.20:50,0,76	0/1:11,0:11:32.28:32,0,100	0/1:25,1:23:72.84:73,0,92	0/1:12,0:12:0.77:1,0,70	0/1:69,1:70:97.15:97,0,499	0/1:17,1:18:64.06:64,0,122	1/1:9,1:9:11.20:71,11,0	1/1:17,0:17:2.80:13,3,0	1/1:9,0:9:13.99:66,14,0	0/1:16,1:17:36.68:37,0,151	0/1:17,0:16:79.31:79,0,108	./.
chr10	11023618	.	T	TG	6567.96	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-15.059;DP=610;FS=16.478;HRun=2;HaplotypeScore=162.9053;InbreedingCoeff=0.9296;MQ=51.68;MQ0=17;MQRankSum=10.779;QD=29.59;ReadPosRankSum=2.811;VQSLOD=2.8531;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:38.69:0,39,218	0/0:8,0:8:18.81:0,19,129	0/0:55,0:22:59.21:0,59,712	0/0:55,0:26:69.17:0,69,841	0/0:11,0:10:8.72:0,9,88	0/0:25,0:25:60.14:0,60,356	0/0:21,0:20:38.04:0,38,377	1/1:1,18:19:33.94:447,34,0	0/0:21,0:21:47.36:0,47,308	0/0:16,0:12:30.72:0,31,185	0/0:3,0:3:7.54:0,8,53	1/1:3,24:25:27.89:807,28,0	1/1:1,31:32:72.24:1064,72,0	1/1:2,26:28:67.47:982,67,0	0/0:26,0:26:55.30:0,55,393	0/0:23,0:23:45.37:0,45,373	0/0:20,0:20:43.55:0,44,408	0/0:10,0:10:23.02:0,23,203	1/1:13,8:18:13.09:559,13,0	1/1:2,9:11:21.96:316,22,0	1/1:7,59:66:99:1824,123,0	1/1:1,16:17:39.13:569,39,0	0/0:10,0:9:9.38:0,9,65	0/0:16,0:16:5.38:0,5,45	0/0:8,0:8:13.57:0,14,59	0/0:17,0:17:28.71:0,29,253	0/0:16,0:15:39.75:0,40,300	0/0:3,0:3:9.03:0,9,109
chr10	11023634	.	GGT	G	1030.24	PASS	AB=0.993;AC=23;AF=0.426;AN=54;BaseQRankSum=15.096;DP=568;FS=6.390;HRun=0;HaplotypeScore=189.5305;InbreedingCoeff=-0.1566;MQ=48.96;MQ0=13;MQRankSum=-12.877;QD=3.36;ReadPosRankSum=7.306;VQSLOD=1.3522;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:28:92.01:92,0,317	1/1:7,0:6:13.94:65,14,0	0/1:44,2:21:35.60:36,0,485	0/0:46,0:21:22.43:0,22,679	0/1:11,0:10:4.59:5,0,34	1/1:19,0:19:50.36:237,50,0	0/1:17,0:16:32.52:33,0,80	0/0:28,1:29:21.55:0,22,860	0/1:18,0:18:47.91:126,0,48	0/1:19,0:16:77.86:78,0,139	1/1:4,0:4:2.80:13,3,0	0/0:27,0:27:72.25:0,72,1188	0/0:29,0:29:78.26:0,78,1261	0/0:25,0:25:57.19:0,57,923	0/1:18,0:18:18.14:139,0,18	0/1:21,0:21:75.55:76,0,87	0/1:13,0:13:55.40:55,0,86	0/1:8,0:8:30.89:36,0,31	0/0:23,0:22:51.17:0,51,813	0/1:14,1:15:1.57:2,0,512	0/0:63,1:64:99:0,116,2373	0/0:18,0:18:48.16:0,48,793	0/1:10,0:9:15.61:23,0,16	1/1:14,0:14:2.70:13,3,0	0/1:12,0:12:37.95:43,0,38	0/1:14,0:14:36.87:37,0,119	0/1:13,0:12:16.07:91,0,16	./.
chr10	11024048	.	AT	A	8806.87	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=13.642;DP=729;FS=3.867;HRun=1;HaplotypeScore=77.1810;InbreedingCoeff=1.0000;MQ=80.74;MQ0=0;MQRankSum=-0.575;QD=38.63;ReadPosRankSum=0.851;VQSLOD=5.4970;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,111,1688	0/0:12,0:12:36.11:0,36,552	0/0:25,0:24:63.02:0,63,848	0/0:24,0:25:49.64:0,50,993	0/0:33,0:33:89.96:0,90,1290	0/0:27,0:26:81.28:0,81,1283	0/0:23,0:23:69.17:0,69,995	1/1:0,34:34:99:1312,99,0	0/0:35,0:35:99:0,105,1674	0/0:27,0:27:78.08:0,78,1160	0/0:23,0:23:66.09:0,66,993	1/1:0,31:31:87.29:1217,87,0	1/1:0,32:32:93.27:1275,93,0	1/1:0,31:31:84.28:1174,84,0	0/0:36,0:36:99:0,108,1656	0/0:32,0:32:96.31:0,96,1496	0/0:25,0:25:75.24:0,75,1173	0/0:21,0:21:63.20:0,63,982	1/1:0,13:13:39.13:545,39,0	1/1:0,38:38:99:1399,111,0	1/1:0,24:24:66.22:922,66,0	1/1:0,25:25:72.15:963,72,0	0/0:14,0:14:42.14:0,42,647	0/0:14,0:14:42.14:0,42,667	0/0:22,0:22:66.22:0,66,1039	0/0:29,0:29:87.29:0,87,1370	0/0:26,0:25:78.27:0,78,1246	0/0:14,0:14:42.12:0,42,639
chr10	11024154	.	TGAGA	T	322.89	PASS	AB=0.812;AC=2;AF=0.036;AN=56;BaseQRankSum=5.661;DP=617;FS=1.153;HRun=0;HaplotypeScore=105.6124;InbreedingCoeff=-0.0376;MQ=66.30;MQ0=0;MQRankSum=-3.449;QD=6.09;ReadPosRankSum=-1.587;VQSLOD=2.0435;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:84.29:0,84,2376	0/0:6,0:6:15.05:0,15,357	0/1:16,7:23:99:302,0,1076	0/1:25,5:24:99:110,0,1334	0/0:32,0:32:90.31:0,90,2559	0/0:24,0:24:72.23:0,72,1998	0/0:26,0:26:78.24:0,78,2081	0/0:27,0:27:81.27:0,81,2254	0/0:24,0:24:69.14:0,69,1840	0/0:26,0:26:78.27:0,78,2193	0/0:20,0:20:57.20:0,57,1652	0/0:19,0:19:57.20:0,57,1614	0/0:24,0:24:72.20:0,72,1865	0/0:27,0:27:78.27:0,78,2164	0/0:29,0:29:87.27:0,87,2321	0/0:17,0:17:51.18:0,51,1444	0/0:23,0:23:63.22:0,63,1798	0/0:22,0:22:63.20:0,63,1734	0/0:17,0:17:51.17:0,51,1407	0/0:20,0:20:60.19:0,60,1555	0/0:24,0:24:72.23:0,72,2024	0/0:18,0:18:54.19:0,54,1513	0/0:16,0:16:48.16:0,48,1338	0/0:22,0:22:66.23:0,66,1872	0/0:13,0:13:39.13:0,39,1129	0/0:20,0:20:60.21:0,60,1708	0/0:26,0:26:78.25:0,78,2154	0/0:14,0:14:42.14:0,42,1216
chr10	11024265	.	AG	A	10789.77	PASS	AB=0.981;AC=48;AF=0.857;AN=56;BaseQRankSum=-6.124;DP=508;FS=5.140;HRun=3;HaplotypeScore=103.6903;InbreedingCoeff=0.7308;MQ=74.51;MQ0=1;MQRankSum=-2.807;QD=23.61;ReadPosRankSum=2.306;VQSLOD=4.2881;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,23:24:60.14:710,60,0	1/1:0,5:5:12.04:148,12,0	0/0:19,0:16:29.24:0,29,323	0/0:17,0:15:33.90:0,34,359	1/1:1,19:21:48.10:575,48,0	1/1:0,11:11:24.08:297,24,0	1/1:0,16:16:39.12:480,39,0	1/1:21,0:21:49.75:341,50,0	1/1:2,16:18:39.12:482,39,0	1/1:1,19:20:40.29:599,40,0	1/1:1,22:24:62.68:749,63,0	0/0:15,0:15:37.12:0,37,147	1/1:16,0:16:38.29:185,38,0	0/1:24,1:25:25.40:25,0,130	1/1:1,18:19:25.36:499,25,0	1/1:4,15:17:43.56:544,44,0	1/1:1,29:30:75.17:907,75,0	1/1:1,18:19:45.13:538,45,0	1/1:16,0:16:35.62:207,36,0	1/1:23,0:23:31.20:193,31,0	1/1:10,0:10:18.85:114,19,0	0/1:17,0:17:6.25:6,0,70	1/1:0,12:13:30.09:365,30,0	1/1:1,19:20:54.16:659,54,0	1/1:0,13:13:39.12:473,39,0	1/1:0,21:21:60.07:694,60,0	1/1:0,23:23:57.64:696,58,0	1/1:6,7:12:18.93:304,19,0
chr10	11024267	.	G	GA	2003.39	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-11.686;DP=515;FS=0.000;HRun=0;HaplotypeScore=136.8308;InbreedingCoeff=0.9380;MQ=72.65;MQ0=1;MQRankSum=2.371;QD=21.54;ReadPosRankSum=-3.485;VQSLOD=3.5448;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:23.79:0,24,106	0/0:5,0:5:8.88:0,9,27	0/0:17,0:14:29.49:0,29,338	0/0:15,0:14:37.15:0,37,432	0/0:21,0:21:30.32:0,30,102	0/0:11,0:11:17.21:0,17,53	0/0:16,0:16:27.73:0,28,85	1/1:9,13:23:42.63:482,43,0	0/0:17,0:17:27.03:0,27,85	0/0:22,0:22:28.89:0,29,120	0/0:24,0:24:46.77:0,47,145	0/0:15,0:15:43.43:0,43,252	1/1:1,15:16:42.12:480,42,0	0/0:27,0:27:61.53:0,62,342	0/0:19,0:19:32.60:0,33,104	0/0:20,0:18:31.98:0,32,100	0/0:30,0:30:52.66:0,53,161	0/0:18,0:18:32.51:0,33,102	1/1:3,15:19:33:445,33,0	1/1:2,22:24:49.58:521,50,0	1/1:2,9:11:11.91:247,12,0	0/0:18,0:18:42.51:0,43,219	0/0:13,0:13:22.40:0,22,69	0/0:19,0:19:38.28:0,38,119	0/0:13,0:13:28.50:0,28,91	0/0:22,0:22:22.39:0,22,97	0/0:23,0:23:22.53:0,23,100	0/0:12,0:11:3.69:0,4,47
chr10	11024437	.	GA	G	2315.49	PASS	AB=0.824;AC=28;AF=0.500;AN=56;BaseQRankSum=-3.814;DP=574;FS=7.875;HRun=15;HaplotypeScore=92.5112;InbreedingCoeff=0.4954;MQ=64.38;MQ0=11;MQRankSum=6.556;QD=7.02;ReadPosRankSum=1.706;VQSLOD=2.6125;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:38:80.08:0,80,680	0/1:1,2:3:15.06:30,0,15	0/0:51,0:20:0.44:0,0,104	0/1:43,0:11:0.88:1,0,68	1/1:11,17:29:2.15:253,2,0	0/0:11,1:11:22.43:0,22,169	0/0:16,1:18:16.67:0,17,281	0/0:31,0:30:4.01:0,4,101	0/0:7,0:9:18.93:0,19,137	1/1:5,9:14:0.11:127,0,0	1/1:2,16:19:34.43:217,34,0	0/0:14,0:14:16.08:0,16,82	0/0:14,0:14:25.17:0,25,111	0/0:14,0:14:10.78:0,11,44	1/1:4,17:21:47.24:307,47,0	1/1:2,7:9:17.72:115,18,0	1/1:5,21:27:54.28:338,54,0	1/1:6,6:13:10.82:63,11,0	0/1:21,0:19:1.60:2,0,27	0/0:22,0:22:8.14:0,8,45	0/1:11,0:11:1.79:2,0,20	0/0:19,0:19:26.30:0,26,163	1/1:5,6:12:21.22:125,21,0	0/1:10,12:23:23.73:209,0,24	1/1:2,9:13:21.74:127,22,0	1/1:12,13:25:34.54:219,35,0	0/1:14,8:22:12.47:173,0,12	1/1:12,10:22:2.18:195,2,0
chr10	11024443	.	A	AG	1661.30	PASS	AB=0.718;AC=11;AF=0.196;AN=56;BaseQRankSum=-0.240;DP=571;FS=6.119;HRun=0;HaplotypeScore=96.5523;InbreedingCoeff=0.4258;MQ=62.61;MQ0=11;MQRankSum=-1.821;QD=11.54;ReadPosRankSum=1.729;VQSLOD=4.1666;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,100,1197	0/0:4,0:4:11.57:0,12,82	0/0:46,0:15:34.71:0,35,273	0/0:45,0:11:26.10:0,26,196	0/0:28,0:28:83.68:0,84,712	0/0:13,0:12:31.36:0,31,326	0/0:21,0:20:53.13:0,53,582	0/1:13,17:28:82.81:416,0,83	0/0:11,0:11:27.05:0,27,273	0/0:15,0:15:39.02:0,39,357	0/0:19,0:19:50.78:0,51,411	0/1:10,4:14:95.57:96,0,153	0/1:7,7:14:88.82:164,0,89	1/1:10,3:13:17.92:167,18,0	0/0:23,0:23:65.95:0,66,560	0/0:9,0:9:20.99:0,21,179	0/0:26,0:26:65.90:0,66,552	0/0:12,0:12:26.90:0,27,212	1/1:16,5:19:31.79:486,32,0	1/1:20,4:24:34.13:306,34,0	0/1:4,5:9:53.02:77,0,53	0/1:16,3:19:99:116,0,295	0/0:15,0:15:41.90:0,42,344	0/0:26,0:25:68.97:0,69,619	0/0:14,0:14:32.98:0,33,282	0/0:22,0:22:65.69:0,66,540	0/0:18,0:17:47.78:0,48,419	0/0:23,0:22:65.90:0,66,551
chr10	11024449	.	A	AGAAAGAAAGAAAGAAAGAAAG	13366.41	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=-3.747;DP=593;FS=33.108;HRun=0;HaplotypeScore=279.5115;InbreedingCoeff=0.9046;MQ=55.80;MQ0=12;MQRankSum=-7.891;QD=65.52;ReadPosRankSum=-0.663;VQSLOD=3.1186;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,100,3191	0/0:4,0:4:12.04:0,12,438	0/1:41,0:10:16.86:17,0,358	0/0:44,0:11:17.50:0,18,218	0/0:29,0:29:83.90:0,84,2099	0/0:14,0:13:37.40:0,37,835	0/0:25,0:24:29.48:0,29,1986	1/1:33,0:30:80.91:1509,81,0	0/0:12,0:12:33.09:0,33,921	0/0:16,0:16:44.98:0,45,1166	0/0:20,0:20:53.86:0,54,1385	1/1:17,0:17:45.11:2192,45,0	1/1:13,0:13:39.13:2595,39,0	1/1:3,10:15:12.51:920,13,0	0/0:22,0:22:60.07:0,60,1988	0/0:10,0:10:20.94:0,21,703	0/0:26,0:26:65.94:0,66,2170	0/0:12,0:12:22.17:0,22,496	1/1:6,0:31:93.16:2392,93,0	1/1:4,0:25:35.97:1005,36,0	1/1:8,0:8:24.04:649,24,0	1/1:19,0:19:54.15:2087,54,0	0/0:16,0:16:44.85:0,45,828	0/0:25,0:24:65.56:0,66,2143	0/0:17,0:17:35.53:0,36,970	0/0:22,0:22:62.25:0,62,1315	0/0:18,0:17:43.04:0,43,1193	0/0:19,0:18:54.07:0,54,2017
chr10	11025681	.	T	TG	5235.15	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-13.279;DP=814;FS=4.181;HRun=3;HaplotypeScore=97.7445;InbreedingCoeff=0.9993;MQ=77.00;MQ0=0;MQRankSum=-4.128;QD=36.61;ReadPosRankSum=2.223;VQSLOD=5.0754;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,141,1679	0/0:10,0:10:30.09:0,30,360	0/0:30,0:29:50.67:0,51,767	0/0:26,0:25:59.30:0,59,717	0/0:18,0:18:54.17:0,54,647	0/0:21,0:21:63.19:0,63,747	0/0:29,0:29:81.25:0,81,972	0/0:22,0:22:51.13:0,51,585	0/0:30,0:30:87.27:0,87,1044	0/0:29,0:29:81.23:0,81,953	0/0:18,0:18:48.15:0,48,576	1/1:3,38:41:99:1469,105,0	1/1:3,33:36:90.14:1254,90,0	1/1:1,41:42:99:1592,114,0	0/0:39,0:39:99:0,111,1309	0/0:40,0:40:99:0,114,1367	0/0:36,0:36:99:0,105,1244	0/0:30,0:29:87.27:0,87,1043	0/0:19,0:19:51.12:0,51,577	0/0:17,0:17:45.14:0,45,539	0/0:55,0:54:99:0,153,1809	1/1:0,24:24:66.22:920,66,0	0/0:24,0:24:66.20:0,66,790	0/0:36,0:36:99:0,105,1259	0/0:32,0:32:93.26:0,93,1093	0/0:32,0:32:84.26:0,84,1008	0/0:20,0:20:60.18:0,60,720	0/0:8,0:8:24.07:0,24,288
chr10	11026155	.	G	GA	4615.53	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-12.620;DP=655;FS=0.000;HRun=9;HaplotypeScore=62.4297;InbreedingCoeff=0.9702;MQ=68.47;MQ0=0;MQRankSum=1.190;QD=24.17;ReadPosRankSum=-2.956;VQSLOD=4.4387;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:56:99:0,154,1281	0/0:9,0:9:23.99:0,24,208	0/0:11,0:11:16.75:0,17,126	0/0:6,0:6:8.98:0,9,77	0/0:27,0:27:68.90:0,69,585	0/0:22,0:22:62.99:0,63,547	0/0:25,0:25:65.84:0,66,548	1/1:4,26:30:6.15:743,6,0	0/0:26,0:26:68.95:0,69,591	0/0:21,0:21:56.99:0,57,495	0/0:9,0:9:23.97:0,24,205	1/1:1,19:20:51.14:565,51,0	1/1:9,22:31:37.15:638,37,0	1/1:5,20:25:48.13:531,48,0	0/0:30,0:30:74.89:0,75,636	0/0:29,0:29:83.93:0,84,719	0/0:40,0:39:99:0,105,906	0/0:14,0:16:43.07:0,43,351	1/1:2,24:27:69.02:744,69,0	1/1:2,10:12:30.08:332,30,0	1/1:5,27:32:69.19:763,69,0	1/1:5,9:14:27.96:300,28,0	0/0:12,0:12:29.99:0,30,260	0/0:23,0:23:65.95:0,66,566	0/0:23,0:23:62.98:0,63,547	0/0:30,0:30:83.98:0,84,729	0/0:30,0:31:82.97:0,83,702	0/0:18,0:18:53.99:0,54,469
chr10	11026438	.	T	TAA	1719.93	PASS	AB=0.822;AC=29;AF=0.558;AN=52;BaseQRankSum=3.074;DP=318;FS=1.325;HRun=14;HaplotypeScore=66.2747;InbreedingCoeff=0.6696;MQ=53.96;MQ0=4;MQRankSum=-3.062;QD=9.30;ReadPosRankSum=-1.423;VQSLOD=1.4035;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:25:23.12:0,23,238	1/1:2,0:2:2.99:23,3,0	0/0:9,0:2:5.96:0,6,43	./.	0/1:6,0:19:14.06:66,0,14	0/0:16,0:16:35.81:0,36,293	0/0:3,0:5:11.34:0,11,73	0/0:33,0:33:37.97:0,38,306	0/1:4,0:5:0.08:0,0,41	1/1:7,3:11:12.04:151,12,0	1/1:5,0:7:8.83:59,9,0	0/0:1,0:2:5.74:0,6,37	0/1:1,0:2:0:0,0,0	0/0:8,0:8:10.56:0,11,90	1/1:4,5:9:14.94:173,15,0	1/1:2,6:11:19.15:182,19,0	1/1:5,12:21:10.34:165,10,0	1/1:5,2:18:20.25:129,20,0	0/0:21,0:21:29.19:0,29,229	0/0:4,0:4:5.92:0,6,50	0/0:3,0:4:5.72:0,6,37	./.	1/1:3,2:5:5.91:38,6,0	1/1:2,0:2:3.01:38,3,0	1/1:3,0:19:21.81:77,22,0	1/1:8,9:18:8.16:296,8,0	1/1:3,4:8:14.88:164,15,0	1/1:9,15:24:8.22:342,8,0
chr10	11027252	.	C	CT	5573.50	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-14.621;DP=778;FS=10.222;HRun=1;HaplotypeScore=80.7191;InbreedingCoeff=0.9892;MQ=86.20;MQ0=0;MQRankSum=-0.929;QD=40.68;ReadPosRankSum=1.861;VQSLOD=4.8792;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,51:53:99:2067,138,0	0/0:13,0:13:39.11:0,39,490	0/0:31,0:31:84.22:0,84,1027	0/0:20,0:20:48.13:0,48,589	0/0:21,0:21:63.19:0,63,803	1/1:1,21:22:63.21:944,63,0	1/1:1,37:38:99:1529,102,0	0/0:27,0:27:81.24:0,81,1025	1/1:0,24:24:69.23:1034,69,0	0/0:27,0:27:78.25:0,78,1002	0/0:7,0:7:18.06:0,18,234	0/0:27,0:27:81.22:0,81,1009	0/0:40,0:40:99:0,117,1489	0/0:31,0:31:87.28:0,87,1129	0/0:46,0:46:99:0,129,1659	0/0:33,1:34:57.35:0,57,1210	0/0:44,0:44:99:0,126,1586	0/0:22,0:22:66.21:0,66,856	0/0:19,0:19:57.18:0,57,735	0/0:15,0:15:39.11:0,39,489	0/0:71,0:71:99:0,202,2548	0/0:24,0:24:69.21:0,69,880	0/0:14,0:14:42.14:0,42,539	0/0:33,0:33:96.27:0,96,1201	0/0:25,0:25:72.23:0,72,934	0/0:25,0:25:75.24:0,75,974	0/0:21,0:21:60.19:0,60,779	0/0:4,0:4:12.04:0,12,156
chr10	11031056	.	G	GT	27753.03	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=0.568;DP=800;FS=16.571;HRun=4;HaplotypeScore=100.8346;InbreedingCoeff=1.0000;MQ=79.98;MQ0=0;MQRankSum=-10.123;QD=36.91;ReadPosRankSum=5.744;VQSLOD=2.8890;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,47:47:99:1887,138,0	1/1:0,17:17:51.17:698,51,0	0/0:27,0:27:69.18:0,69,768	0/0:21,0:19:51.10:0,51,553	1/1:2,28:30:78.26:1067,78,0	1/1:1,25:26:69.23:937,69,0	1/1:0,24:24:66.22:903,66,0	1/1:4,34:38:99:1397,105,0	1/1:3,23:26:63.21:862,63,0	1/1:1,37:38:99:1486,111,0	1/1:0,20:20:60.16:799,60,0	1/1:2,28:30:78.26:1067,78,0	1/1:2,27:29:75.25:1023,75,0	1/1:0,32:32:87.29:1190,87,0	1/1:3,29:32:87.27:1172,87,0	1/1:3,37:40:99:1478,108,0	1/1:0,34:34:93.31:1272,93,0	1/1:2,21:23:63.18:842,63,0	1/1:4,20:24:63.21:861,63,0	1/1:0,25:25:69.23:944,69,0	1/1:2,20:22:51.17:698,51,0	1/1:1,16:17:48.16:645,48,0	1/1:1,22:23:60.20:821,60,0	1/1:2,30:32:84.28:1149,84,0	1/1:0,28:28:69.23:944,69,0	1/1:0,30:30:90.30:1232,90,0	1/1:0,34:34:96.32:1313,96,0	1/1:4,27:31:78.26:1067,78,0
chr10	11032263	.	CTTTTTTTGTTAAA	C	5573.80	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=9.859;DP=378;FS=54.640;HRun=0;HaplotypeScore=133.6597;InbreedingCoeff=0.9330;MQ=72.60;MQ0=12;MQRankSum=-7.453;QD=77.41;ReadPosRankSum=1.880;VQSLOD=2.7152;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:51.12:0,51,2553	1/1:0,2:2:6.02:207,6,0	0/0:45,0:23:62.18:0,62,1874	0/0:63,0:17:40.81:0,41,1057	0/0:19,0:19:57.20:0,57,3427	0/0:14,0:14:33.07:0,33,1333	0/0:7,0:7:18.04:0,18,661	0/0:15,0:15:40.01:0,40,2191	0/0:8,0:8:24.07:0,24,1152	1/1:0,11:11:33.09:995,33,0	1/1:0,3:3:9.03:320,9,0	0/0:15,0:15:45.14:0,45,2717	0/0:12,0:12:36.10:0,36,1832	0/0:6,0:6:18.06:0,18,812	1/1:4,4:8:24.04:524,24,0	1/1:0,3:3:9.03:316,9,0	1/1:2,10:12:36.11:1113,36,0	1/1:3,2:5:9:234,9,0	0/0:14,0:14:39.13:0,39,2243	0/0:23,0:23:66.21:0,66,3837	0/0:7,0:7:21.07:0,21,1016	0/0:6,0:6:18.01:0,18,720	1/1:1,2:3:9.03:254,9,0	1/1:2,4:6:9.03:269,9,0	0/0:26,0:26:39.02:0,39,1946	1/1:1,5:6:18.05:546,18,0	1/1:1,6:7:18.04:538,18,0	1/1:4,2:5:12.01:259,12,0
chr10	11032277	.	CTTT	C	1469.05	PASS	AB=0.775;AC=24;AF=0.429;AN=56;BaseQRankSum=9.612;DP=389;FS=28.728;HRun=3;HaplotypeScore=86.9634;InbreedingCoeff=0.7367;MQ=66.73;MQ0=21;MQRankSum=-6.778;QD=21.29;ReadPosRankSum=4.069;VQSLOD=-0.5723;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:26.19:0,26,786	1/1:0,1:2:6.01:63,6,0	0/0:64,0:23:56.84:0,57,814	0/0:71,0:17:16.38:0,16,388	0/0:26,0:26:63.02:0,63,1271	0/0:15,0:15:21.04:0,21,484	0/1:7,0:7:14.34:14,0,201	0/0:16,0:16:38.73:0,39,796	0/0:5,0:5:12.03:0,12,234	0/1:2,8:11:5.05:292,0,5	1/1:1,2:4:9.03:108,9,0	0/0:13,0:13:17.09:0,17,790	0/0:12,0:12:30.09:0,30,578	0/0:6,0:5:15.03:0,15,275	1/1:1,3:5:12.03:135,12,0	1/1:0,3:3:9.03:109,9,0	1/1:2,7:11:30.07:336,30,0	1/1:0,2:2:6.02:75,6,0	0/0:15,0:14:35.39:0,35,758	0/0:22,0:22:6.06:0,6,1137	0/0:4,0:4:11.93:0,12,212	0/0:4,0:4:9.03:0,9,205	1/1:0,2:2:6.02:72,6,0	1/1:0,3:4:6.02:73,6,0	0/0:24,0:23:25.98:0,26,602	1/1:0,2:5:15.03:156,15,0	1/1:0,4:6:15.04:173,15,0	1/1:4,0:5:6.02:66,6,0
chr10	11032303	.	A	AAAAG	5972.24	PASS	AB=1.000;AC=49;AF=0.907;AN=54;BaseQRankSum=-5.080;DP=490;FS=4.680;HRun=0;HaplotypeScore=114.3543;InbreedingCoeff=0.4585;MQ=69.52;MQ0=16;MQRankSum=-1.217;QD=13.70;ReadPosRankSum=-1.120;VQSLOD=4.0366;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:1,1:23:14.98:179,15,0	1/1:6,0:6:13.18:100,13,0	0/0:36,0:17:23.87:0,24,221	0/1:36,0:17:1.24:1,0,180	1/1:3,0:24:44.79:309,45,0	./.	1/1:3,1:17:13.22:254,13,0	1/1:11,1:29:69.38:612,69,0	1/1:7,0:7:15.65:111,16,0	1/1:17,0:17:32.29:346,32,0	1/1:14,0:14:30.65:247,31,0	1/1:16,0:16:44.98:508,45,0	1/1:8,0:8:10.53:93,11,0	1/1:9,0:9:21.68:166,22,0	1/1:16,0:15:29.06:227,29,0	1/1:16,0:16:47.32:331,47,0	1/1:24,0:23:24.68:260,25,0	1/1:6,0:6:2.44:35,2,0	1/1:9,13:22:26.80:389,27,0	1/1:8,0:18:36.58:339,37,0	1/1:12,0:12:26.92:232,27,0	1/1:7,0:7:15.45:144,15,0	1/1:20,0:20:43.72:283,44,0	1/1:11,0:11:23.41:158,23,0	1/1:4,8:27:6.29:54,6,0	0/1:18,0:18:2.47:222,0,2	1/1:23,0:23:47.16:311,47,0	0/1:7,0:7:2.63:60,0,3
chr10	11035261	.	A	AGAGGGAGGGATG	68056.46	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-3.625;DP=677;FS=7.295;HRun=0;HaplotypeScore=203.3644;InbreedingCoeff=0.9895;MQ=67.76;MQ0=0;MQRankSum=-9.279;QD=107.01;ReadPosRankSum=3.938;VQSLOD=3.7412;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,13:31:57.20:3104,57,0	1/1:3,7:19:33.11:1773,33,0	0/0:21,0:21:51.24:0,51,1630	0/0:20,0:20:38.66:0,39,1064	1/1:3,6:21:24.01:1118,24,0	1/1:5,11:20:39.13:2171,39,0	1/1:6,9:27:42.14:2417,42,0	1/1:23,0:23:45.06:1489,45,0	1/1:7,12:26:54.19:2890,54,0	1/1:9,10:29:78.20:3892,78,0	1/1:10,8:21:39.13:2239,39,0	1/1:18,15:33:87.28:4421,87,0	1/1:17,10:29:84.20:3713,84,0	1/1:12,13:25:75.19:3766,75,0	1/1:5,15:29:54.19:3040,54,0	1/1:6,19:34:72.25:4234,72,0	1/1:7,11:25:45.15:2586,45,0	1/1:5,5:15:30.10:1627,30,0	1/1:4,4:12:36.12:1923,36,0	1/1:7,11:23:42.14:2206,42,0	1/1:8,3:17:15.05:800,15,0	1/1:14,17:32:78.27:4161,78,0	1/1:9,15:27:60.21:3302,60,0	1/1:10,7:25:27.09:1481,27,0	1/1:7,12:26:54.19:2932,54,0	1/1:5,8:24:63.11:2658,63,0	1/1:7,5:24:35.91:2105,36,0	1/1:3,12:18:33.11:2010,33,0
chr10	11035287	.	C	CG	2393.56	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=6.293;DP=587;FS=6.314;HRun=2;HaplotypeScore=247.3858;InbreedingCoeff=0.9991;MQ=79.20;MQ0=0;MQRankSum=-4.967;QD=25.46;ReadPosRankSum=2.336;VQSLOD=2.8799;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:60.19:0,60,741	0/0:14,0:14:36.11:0,36,444	0/0:29,0:29:78.24:0,78,959	0/0:20,0:20:52.64:0,53,602	0/0:13,0:13:30.09:0,30,371	0/0:21,0:21:54.13:0,54,651	0/0:21,0:21:51.16:0,51,630	0/0:26,0:26:63.20:0,63,780	0/0:24,0:24:69.17:0,69,835	0/0:25,0:25:69.16:0,69,815	0/0:21,0:21:48.15:0,48,593	1/1:5,23:28:60.20:801,60,0	1/1:3,20:23:44.68:577,45,0	1/1:5,14:19:39.13:529,39,0	0/0:26,0:26:69.22:0,69,853	0/0:30,0:30:78.24:0,78,964	0/0:24,0:24:54.13:0,54,651	0/0:14,0:13:39.12:0,39,483	0/0:9,0:9:27.03:0,27,305	0/0:18,0:18:45.13:0,45,544	0/0:21,0:21:48.13:0,48,580	1/1:4,20:24:53.85:646,54,0	0/0:25,0:25:63.20:0,63,776	0/0:21,0:20:27.01:0,27,334	0/0:20,0:20:45.14:0,45,556	0/0:18,0:18:54.17:0,54,666	0/0:17,0:17:42.13:0,42,518	0/0:11,0:11:33.10:0,33,406
chr10	11035706	.	A	AC	23711.33	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-7.959;DP=706;FS=0.707;HRun=3;HaplotypeScore=57.5103;InbreedingCoeff=0.9992;MQ=77.71;MQ0=0;MQRankSum=-9.091;QD=35.18;ReadPosRankSum=5.485;VQSLOD=4.9777;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,47:50:99:1805,129,0	1/1:1,14:14:38.97:546,39,0	0/0:20,0:20:54.11:0,54,605	0/0:12,0:12:33.07:0,33,382	1/1:1,24:25:51.17:714,51,0	1/1:3,13:16:36.08:482,36,0	1/1:2,30:32:78.26:1092,78,0	1/1:1,26:27:75.24:1027,75,0	1/1:3,15:18:45.15:630,45,0	1/1:0,24:24:72.22:974,72,0	1/1:0,15:15:30.10:419,30,0	1/1:0,26:26:57.19:798,57,0	1/1:0,21:21:57.19:798,57,0	1/1:0,28:28:78.26:1092,78,0	1/1:2,23:25:63.21:882,63,0	1/1:2,16:18:39.13:539,39,0	1/1:1,39:40:99:1386,99,0	1/1:1,46:47:99:1722,123,0	1/1:2,20:22:60.17:819,60,0	1/1:2,17:19:48.16:662,48,0	1/1:3,56:59:99:2016,144,0	1/1:0,14:14:39.13:545,39,0	1/1:0,13:13:33.11:462,33,0	1/1:0,28:28:81.27:1134,81,0	1/1:0,23:23:63.21:881,63,0	1/1:2,22:24:69.20:941,69,0	1/1:5,23:28:60.20:840,60,0	1/1:0,17:16:36.12:504,36,0
chr10	11036562	.	T	TTGTG	4358.40	PASS	AB=1.000;AC=44;AF=0.815;AN=54;BaseQRankSum=-0.157;DP=581;FS=2.405;HRun=0;HaplotypeScore=181.1480;InbreedingCoeff=0.3819;MQ=54.58;MQ0=13;MQRankSum=-1.628;QD=8.66;ReadPosRankSum=2.861;VQSLOD=4.0398;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:31,0:28:12.06:92,12,0	1/1:5,1:6:3.01:71,3,0	0/0:35,0:22:39.72:0,40,600	0/0:27,0:20:44.62:0,45,559	0/1:18,0:18:0.03:0,0,0	1/1:16,0:16:17.40:126,17,0	0/1:27,0:25:1.44:71,0,1	1/1:26,0:21:8.61:63,9,0	0/1:14,0:14:13.87:51,0,14	1/1:19,5:25:54.31:866,54,0	1/1:11,6:18:11.46:139,11,0	1/1:16,0:15:7.42:86,7,0	1/1:19,0:17:3.43:27,3,0	0/1:21,0:20:2.73:3,0,9	1/1:15,2:18:8.90:63,9,0	1/1:27,4:32:29.91:435,30,0	1/1:21,3:25:9.27:277,9,0	1/1:12,1:13:26.56:363,27,0	1/1:18,0:18:11.11:100,11,0	1/1:17,0:17:9.84:68,10,0	0/1:22,0:18:0:0,0,0	./.	1/1:15,3:17:12.94:147,13,0	1/1:19,3:20:4.14:37,4,0	0/1:15,0:15:31.10:31,0,81	1/1:24,3:28:43.91:608,44,0	1/1:11,5:16:25.72:335,26,0	1/1:18,0:18:24.02:299,24,0
chr10	11036571	.	TGA	T	4767.04	PASS	AB=0.888;AC=47;AF=0.839;AN=56;BaseQRankSum=-1.843;DP=656;FS=8.825;HRun=0;HaplotypeScore=164.2176;InbreedingCoeff=0.2831;MQ=45.83;MQ0=29;MQRankSum=1.865;QD=7.97;ReadPosRankSum=3.593;VQSLOD=4.1319;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:24,7:28:29.89:283,30,0	1/1:7,0:7:10.29:66,10,0	0/0:31,1:19:7.94:0,8,400	0/0:26,0:19:31.08:0,31,447	1/1:21,0:21:16.21:125,16,0	1/1:15,4:17:23.92:230,24,0	1/1:27,3:27:33.30:272,33,0	1/1:38,0:21:20.83:307,21,0	1/1:14,3:17:32.83:300,33,0	0/1:27,3:29:20.94:299,0,21	1/1:17,1:17:12.45:100,12,0	1/1:14,4:16:26.86:255,27,0	1/1:20,2:19:35.67:262,36,0	1/1:13,5:17:14.92:140,15,0	1/1:21,2:22:6.45:48,6,0	1/1:32,3:33:17.82:273,18,0	1/1:27,3:28:19.06:229,19,0	1/1:14,1:13:17.49:187,17,0	0/1:22,0:20:40.30:213,0,40	1/1:16,2:18:4.80:124,5,0	1/1:37,0:25:5.99:50,6,0	0/1:2,15:17:0:0,0,0	1/1:22,1:22:3.94:146,4,0	1/1:27,1:26:8.87:66,9,0	0/1:15,0:15:25.54:79,0,26	1/1:28,1:28:2.09:318,2,0	0/1:19,0:19:16.84:154,0,17	1/1:17,1:18:32.08:242,32,0
chr10	11036573	.	AGT	A	92.56	PASS	AB=0.984;AC=14;AF=0.259;AN=54;BaseQRankSum=3.222;DP=677;FS=4.147;HRun=0;HaplotypeScore=185.2069;InbreedingCoeff=0.0619;MQ=41.25;MQ0=37;MQRankSum=1.285;QD=0.31;ReadPosRankSum=3.647;VQSLOD=2.4775;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:29,3:28:17.23:37,0,17	0/0:7,0:6:3.59:0,4,10	0/1:28,0:15:17.23:17,0,79	0/0:23,0:17:11.05:0,11,114	0/0:23,0:23:12.91:0,13,97	1/1:17,0:15:3.11:38,3,0	0/1:32,0:28:10.39:10,0,23	0/0:38,0:21:6.75:0,7,41	1/1:20,0:19:7.29:59,7,0	0/0:33,0:32:41.56:0,42,389	0/0:21,0:19:2.99:0,3,24	0/1:20,0:17:16.04:39,0,16	0/0:24,0:21:0.90:0,1,5	0/1:21,0:19:11.23:11,0,18	0/0:26,0:25:7.12:0,7,43	0/0:35,0:33:0.56:0,1,47	0/1:31,0:29:5.06:5,0,83	0/0:15,0:13:4.32:0,4,46	0/0:20,0:17:17.11:0,17,129	0/1:18,0:18:0.90:1,0,13	0/1:37,3:27:0.03:0,0,0	./.	0/0:24,0:23:6.48:0,6,64	0/1:29,0:27:0.01:0,0,0	0/0:15,0:15:22.31:0,22,221	0/0:30,0:29:26.78:0,27,217	0/0:22,0:21:18.01:0,18,152	0/1:15,0:15:1.82:2,0,54
chr10	11036589	.	TGA	T	2558.37	PASS	AB=0.975;AC=38;AF=0.679;AN=56;BaseQRankSum=-4.210;DP=713;FS=8.921;HRun=0;HaplotypeScore=175.5351;InbreedingCoeff=-0.3606;MQ=31.83;MQ0=64;MQRankSum=4.351;QD=3.69;ReadPosRankSum=1.081;VQSLOD=1.5719;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:31,0:24:20.19:196,20,0	0/1:7,0:6:15.41:15,0,25	0/1:14,0:6:10.69:11,0,21	0/1:10,0:6:17.81:18,0,49	1/1:24,0:24:8.98:73,9,0	1/1:22,0:19:16.80:180,17,0	1/1:36,0:27:17.88:153,18,0	0/1:41,0:22:87.29:153,0,87	1/1:26,0:20:18.96:212,19,0	0/1:27,3:28:99:152,0,193	1/1:23,1:21:3.14:46,3,0	0/1:31,1:24:23.81:199,0,24	1/1:24,1:21:10.29:138,10,0	1/1:25,1:20:8.99:94,9,0	1/1:31,2:29:1.68:19,2,0	0/1:39,3:37:6.11:167,0,6	0/1:29,2:27:55.55:86,0,56	0/1:16,1:12:10.85:134,0,11	0/1:18,0:15:17.46:95,0,17	0/1:20,0:19:3.62:69,0,4	0/1:54,0:34:5.58:20,0,6	0/0:18,1:18:2.97:0,3,20	0/1:19,1:19:34.14:82,0,34	1/1:27,1:24:2.90:17,3,0	0/1:18,0:17:28.46:57,0,28	0/1:29,1:28:99:160,0,159	0/1:19,0:18:46.27:46,0,81	1/1:14,1:15:15.42:120,15,0
chr10	11036607	.	TGA	T	1637.96	PASS	AB=0.952;AC=28;AF=0.538;AN=52;BaseQRankSum=0.779;DP=731;FS=29.917;HRun=0;HaplotypeScore=177.9416;InbreedingCoeff=-0.1732;MQ=27.92;MQ0=101;MQRankSum=-0.275;QD=2.57;ReadPosRankSum=-0.494;VQSLOD=1.3436;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,4:20:3.33:0,3,8	0/1:8,1:6:14.38:14,0,88	./.	./.	0/1:22,0:22:0:0,0,0	0/1:21,2:17:9.56:37,0,10	1/1:39,0:26:5.09:32,5,0	0/1:44,1:24:69.11:69,0,214	1/1:19,6:19:8.19:80,8,0	0/1:36,2:29:99:267,0,120	0/1:23,2:23:0.53:19,0,1	0/1:33,0:24:24.23:177,0,24	0/1:30,0:23:12.07:112,0,12	0/1:30,0:23:22.25:94,0,22	0/1:27,6:29:0.03:0,0,0	1/1:37,3:33:23.23:170,23,0	0/1:31,1:26:80.22:80,0,94	0/1:13,0:9:29.69:50,0,30	0/1:13,1:12:24.77:111,0,25	1/1:23,0:21:5.92:55,6,0	0/1:58,1:32:0:0,0,0	0/0:17,0:16:3.01:0,3,54	0/1:21,2:19:14.99:15,0,64	1/1:28,2:24:2.92:17,3,0	0/0:23,0:18:11.48:0,11,110	0/1:34,4:33:21.88:291,0,22	0/0:18,3:17:7.41:0,7,90	1/1:12,2:13:13.69:90,14,0
chr10	11036609	.	A	AGT	1092.61	PASS	AB=0.982;AC=27;AF=0.540;AN=50;BaseQRankSum=3.121;DP=737;FS=16.817;HRun=0;HaplotypeScore=179.5269;InbreedingCoeff=-0.2408;MQ=27.40;MQ0=100;MQRankSum=-3.001;QD=1.77;ReadPosRankSum=1.260;VQSLOD=1.2883;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:31,0:19:0:0,0,0	0/1:10,0:7:8.94:9,0,62	./.	./.	./.	0/1:23,0:17:23.98:40,0,24	1/1:39,0:26:2.68:11,3,0	0/1:45,0:25:34.90:35,0,142	1/1:25,0:19:3.21:27,3,0	0/1:39,1:31:35.14:331,0,35	0/0:23,1:23:2.94:0,3,19	0/1:34,0:24:33.89:50,0,34	0/1:29,1:23:9.76:10,0,34	0/1:29,1:23:3.86:4,0,27	0/0:27,4:27:0:0,0,0	0/1:35,3:32:11.95:40,0,12	0/1:30,1:25:55.02:59,0,55	0/1:13,0:9:30.63:40,0,31	0/1:16,0:15:53.85:82,0,54	1/1:22,2:22:6.43:44,6,0	0/1:62,1:34:0:0,0,0	0/0:17,0:16:3.01:0,3,37	0/0:23,1:20:5.71:0,6,32	1/1:31,0:25:2.60:10,3,0	0/1:23,0:18:8.01:8,0,49	1/1:34,3:32:43.82:363,44,0	0/1:20,0:16:8.99:26,0,9	1/1:13,0:12:6.48:38,6,0
chr10	11036613	.	TGTGTGTGA	T	2075.93	PASS	AB=0.998;AC=25;AF=0.500;AN=50;BaseQRankSum=1.644;DP=748;FS=20.875;HRun=0;HaplotypeScore=199.1192;InbreedingCoeff=-0.4038;MQ=26.61;MQ0=106;MQRankSum=-2.643;QD=3.31;ReadPosRankSum=-0.027;VQSLOD=1.4595;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:32,0:20:0.89:2,1,0	0/1:11,0:8:13.15:13,0,166	./.	./.	./.	0/1:26,1:21:15.16:39,0,15	1/1:39,0:26:2.68:12,3,0	0/1:49,0:28:99:201,0,100	1/1:26,1:21:12.40:88,12,0	0/1:36,0:27:99:500,0,141	0/0:23,0:22:1.22:0,1,5	0/1:34,0:24:5.88:121,0,6	0/1:28,0:21:24.62:156,0,25	0/1:32,0:25:69.03:96,0,69	0/0:31,1:28:0:0,0,0	0/1:36,0:29:42.50:43,0,75	0/1:31,0:25:89.10:89,0,124	0/1:15,0:10:74.98:75,0,77	0/1:18,0:16:17.24:98,0,17	1/1:25,0:23:8.57:55,9,0	0/1:63,0:34:0:0,0,0	0/0:17,0:16:3.01:0,3,81	0/0:23,1:20:3.90:0,4,56	0/1:32,0:26:4.61:5,0,9	0/1:23,0:18:7.53:8,0,86	0/1:40,0:33:22.86:517,0,23	0/1:18,0:15:9.78:21,0,10	0/1:12,0:11:8.97:70,0,9
chr10	11036619	.	TGA	T	1198.06	PASS	AB=0.988;AC=25;AF=0.500;AN=50;BaseQRankSum=0.749;DP=737;FS=12.773;HRun=0;HaplotypeScore=179.1735;InbreedingCoeff=-0.3695;MQ=25.34;MQ0=109;MQRankSum=-1.451;QD=1.95;ReadPosRankSum=-1.290;VQSLOD=1.6905;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:29,1:19:0:0,0,0	0/1:10,0:7:19.39:19,0,106	./.	./.	./.	0/1:30,0:23:11.76:31,0,12	0/0:40,0:26:1.26:0,1,5	0/1:42,0:25:47.46:47,0,223	1/1:24,0:18:0.93:26,1,0	0/1:37,0:26:65.21:266,0,65	0/0:22,0:21:1.79:0,2,5	0/1:33,0:23:1.24:97,0,1	0/1:27,0:20:21.35:26,0,21	0/1:31,0:24:50.30:58,0,50	0/1:35,0:30:0.24:0,0,0	0/1:33,0:27:3.69:87,0,4	0/1:29,2:25:53.65:76,0,54	0/1:18,0:13:42.99:65,0,43	0/1:18,0:16:26.77:109,0,27	1/1:20,0:18:4.70:27,5,0	1/1:67,0:36:1.25:3,1,0	0/0:16,0:15:3.01:0,3,57	0/0:24,0:20:5.97:0,6,74	0/1:32,2:27:7.55:13,0,8	0/1:23,0:18:28.99:29,0,69	0/1:42,0:35:22.71:275,0,23	0/1:19,1:17:21.74:27,0,22	1/1:10,0:9:8.21:43,8,0
chr10	11036621	.	A	AGTGT	1995.51	PASS	AB=0.973;AC=27;AF=0.540;AN=50;BaseQRankSum=0.051;DP=731;FS=23.434;HRun=0;HaplotypeScore=181.8259;InbreedingCoeff=0.0281;MQ=25.25;MQ0=108;MQRankSum=-3.570;QD=3.87;ReadPosRankSum=-1.553;VQSLOD=0.8198;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:20:0.44:0,0,1	0/1:10,0:7:10.95:11,0,66	./.	./.	./.	0/1:30,0:23:0:0,0,0	1/1:38,0:25:3:27,3,0	1/1:41,0:25:28.03:385,28,0	1/1:24,0:18:13.38:95,13,0	0/1:35,0:24:64.78:229,0,65	0/0:19,0:18:0.47:0,0,1	1/1:31,2:23:14.60:204,15,0	0/1:26,1:20:20.94:188,0,21	0/1:24,5:22:46.04:107,0,46	0/1:36,0:31:0:1,0,0	0/1:33,0:27:3.44:3,0,42	0/1:30,0:24:53.62:76,0,54	0/1:18,0:13:43.40:56,0,43	1/1:19,0:17:17.90:150,18,0	1/1:20,0:18:4.23:15,4,0	0/0:70,0:39:0.47:0,0,1	0/0:15,1:15:3.01:0,3,40	0/0:27,0:23:6.01:0,6,77	0/0:34,0:28:2.67:0,3,15	0/1:20,3:18:18.90:19,0,45	1/1:40,0:33:14.69:502,15,0	1/1:18,0:15:4.29:16,4,0	0/1:10,0:9:1.11:44,0,1
chr10	11036631	.	AGT	A	651.18	PASS	AB=0.951;AC=20;AF=0.400;AN=50;BaseQRankSum=0.790;DP=732;FS=1.518;HRun=0;HaplotypeScore=169.3779;InbreedingCoeff=-0.0276;MQ=24.89;MQ0=115;MQRankSum=-2.633;QD=1.45;ReadPosRankSum=-0.136;VQSLOD=2.4576;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:27,2:19:0.22:0,0,0	0/1:10,0:6:19.03:19,0,58	./.	./.	./.	1/1:25,2:20:2.85:34,3,0	0/0:38,4:28:1.07:0,1,3	0/1:43,1:20:98.05:98,0,205	0/1:21,2:17:10.65:11,0,18	0/1:32,3:25:39.61:156,0,40	1/1:20,1:20:3.93:24,4,0	0/0:28,0:19:9.90:0,10,116	0/0:31,0:23:18.49:0,18,303	0/0:31,0:24:14.83:0,15,122	0/1:33,4:32:0.23:0,0,0	0/0:27,5:25:2.16:0,2,60	0/1:27,1:21:8.38:8,0,124	0/1:18,1:13:22.77:34,0,23	0/1:22,1:21:39.79:40,0,137	0/1:20,1:18:7.77:8,0,9	0/1:69,0:37:0:0,0,0	0/0:14,0:13:3.01:0,3,34	0/0:23,6:24:5.96:0,6,52	0/0:34,1:30:2.87:0,3,15	0/0:20,1:16:3.01:0,3,42	0/1:35,3:31:58.47:266,0,58	1/1:14,2:13:8.46:43,8,0	1/1:10,0:9:5.93:44,6,0
chr10	11036633	.	T	TGA	1432.45	PASS	AB=0.887;AC=23;AF=0.460;AN=50;BaseQRankSum=-1.185;DP=751;FS=7.731;HRun=0;HaplotypeScore=173.7417;InbreedingCoeff=-0.1570;MQ=24.91;MQ0=120;MQRankSum=-1.976;QD=2.92;ReadPosRankSum=0.436;VQSLOD=1.5002;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:26,3:19:1.89:11,2,0	0/1:8,2:6:19.09:19,0,33	./.	./.	./.	1/1:19,8:20:2.89:16,3,0	0/0:38,4:28:1.08:0,1,3	0/1:40,5:20:99:349,0,169	0/1:20,3:17:34.39:48,0,34	0/1:34,3:27:99:245,0,148	1/1:17,5:21:3.45:24,3,0	0/0:27,0:18:4.60:0,5,36	0/0:33,0:25:1.04:0,1,243	0/0:31,0:24:4.83:0,5,91	0/1:28,9:32:0:0,0,0	0/1:26,7:26:22.18:22,0,60	0/1:27,2:22:26.30:26,0,120	0/1:18,1:13:51.43:51,0,71	0/1:23,0:20:57.21:57,0,247	0/1:19,2:18:7.80:8,0,9	1/1:68,1:38:0.20:0,0,0	0/0:14,0:13:2.97:0,3,20	0/0:27,2:24:5.70:0,6,78	0/0:33,6:34:2.30:0,2,15	0/0:22,0:16:3:0,3,37	0/1:28,11:32:35.53:581,0,36	1/1:13,4:14:5.14:30,5,0	1/1:7,3:9:6.02:77,6,0
chr10	11036645	.	TGA	T	556.75	PASS	AB=0.996;AC=18;AF=0.333;AN=54;BaseQRankSum=-0.453;DP=823;FS=8.164;HRun=0;HaplotypeScore=167.3316;InbreedingCoeff=-0.1640;MQ=27.47;MQ0=125;MQRankSum=-1.364;QD=1.25;ReadPosRankSum=0.012;VQSLOD=2.1966;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:21:2.24:13,2,0	0/1:13,0:9:15.60:16,0,56	0/0:31,0:8:11.06:0,11,99	0/0:34,0:6:7.88:0,8,69	./.	1/1:32,0:25:7.72:48,8,0	0/0:39,0:26:0.94:0,1,2	0/1:46,0:23:88.40:88,0,170	0/1:22,0:17:18.40:36,0,18	0/1:39,1:28:93.73:94,0,124	0/0:21,1:21:1.64:0,2,14	0/0:24,0:17:1.02:0,1,102	0/0:31,0:23:14.38:0,14,360	0/0:33,0:26:1.47:0,1,138	0/0:38,0:33:5.56:0,6,47	0/1:33,0:27:6.44:6,0,111	0/1:26,0:19:36.52:37,0,102	0/1:20,0:13:32.13:32,0,54	0/1:21,0:18:43.65:44,0,131	0/0:22,1:20:2.74:0,3,9	0/1:72,0:40:0.16:0,0,0	0/0:15,0:14:5.97:0,6,45	0/0:25,2:23:4.82:0,5,20	0/0:43,0:38:8.76:0,9,61	0/1:22,0:16:15.98:16,0,61	0/1:40,1:36:34.95:234,0,35	0/1:17,0:15:11.31:11,0,34	1/1:11,0:10:3.33:22,3,0
chr10	11036647	.	AGT	A	137.82	PASS	AB=0.991;AC=9;AF=0.167;AN=54;BaseQRankSum=0.847;DP=827;FS=0.000;HRun=0;HaplotypeScore=170.2596;InbreedingCoeff=0.1671;MQ=27.62;MQ0=121;MQRankSum=-2.739;QD=0.53;ReadPosRankSum=0.671;VQSLOD=2.7577;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:21:2.44:25,2,0	0/0:13,0:9:7.68:0,8,57	0/0:38,0:9:17.08:0,17,207	0/0:39,0:9:23.73:0,24,222	./.	1/1:34,0:27:7.66:43,8,0	0/1:38,0:25:0:0,0,0	0/1:43,0:22:99:110,0,128	0/1:22,0:17:24.25:24,0,37	0/0:38,0:27:51.94:0,52,407	0/0:21,0:20:5.71:0,6,62	0/0:24,0:17:11.85:0,12,129	0/0:29,1:23:9.81:0,10,343	0/0:32,1:26:16.88:0,17,150	0/0:34,0:31:5.75:0,6,89	0/0:33,0:27:18:0,18,154	0/0:26,0:20:0.51:0,1,135	0/0:22,0:15:11.51:0,12,158	0/1:20,1:18:46.69:54,0,47	0/0:22,1:20:1.17:0,1,23	0/1:71,0:39:0:0,0,0	0/0:15,0:14:4.26:0,4,48	0/0:28,0:25:0.12:0,0,38	0/0:44,0:39:6.02:0,6,87	0/0:22,0:16:5.85:0,6,51	0/0:40,0:35:7.61:0,8,282	0/0:17,0:15:0.52:0,1,102	0/0:11,0:10:7.54:0,8,39
chr10	11036656	.	G	GTA	65.67	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=-0.506;DP=890;FS=11.158;HRun=0;HaplotypeScore=195.2423;InbreedingCoeff=-0.0120;MQ=28.65;MQ0=107;MQRankSum=1.213;QD=0.36;ReadPosRankSum=-2.026;VQSLOD=1.2476;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:24:5.66:0,6,47	0/1:12,0:9:43.82:93,0,44	0/0:65,0:17:34.26:0,34,334	0/0:67,0:16:40.79:0,41,375	0/0:18,0:17:2.37:0,2,8	0/0:36,0:31:8.87:0,9,78	0/0:33,0:25:4.15:0,4,33	0/0:46,0:26:64.14:0,64,495	0/0:25,0:20:22.46:0,22,125	0/0:39,0:29:70.57:0,71,647	0/0:19,0:19:8.42:0,8,60	0/0:19,0:14:10.90:0,11,97	0/0:30,0:25:31.43:0,31,343	0/1:33,0:25:1.67:2,0,149	0/0:33,1:32:8.78:0,9,83	0/0:33,2:29:22.61:0,23,195	0/1:29,0:22:20.89:21,0,233	0/0:21,0:16:22.66:0,23,207	0/0:26,0:21:44.90:0,45,416	0/1:23,0:20:8.04:8,0,12	1/1:68,0:43:0.16:1,0,0	0/1:15,0:14:42.81:46,0,43	0/0:28,0:25:5.19:0,5,41	0/0:45,1:41:5.72:0,6,54	0/0:22,0:16:9.01:0,9,94	0/0:41,0:37:65.50:0,65,697	0/0:18,0:16:12.34:0,12,104	0/0:11,0:10:8.85:0,9,78
chr10	11036663	.	TGA	T	642.80	PASS	AB=0.965;AC=21;AF=0.375;AN=56;BaseQRankSum=-0.349;DP=877;FS=15.873;HRun=0;HaplotypeScore=186.9182;InbreedingCoeff=-0.1528;MQ=29.32;MQ0=106;MQRankSum=0.798;QD=1.25;ReadPosRankSum=-2.896;VQSLOD=0.9893;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:24,5:25:6.96:65,7,0	0/1:9,2:9:10.39:42,0,10	0/0:87,0:18:32.93:0,33,388	0/0:87,0:17:33.93:0,34,420	1/1:17,0:16:2.96:19,3,0	1/1:27,7:29:8.90:106,9,0	0/1:30,3:26:5.99:29,0,6	0/1:35,0:17:70.27:98,0,70	0/1:20,4:19:22:67,0,22	0/1:35,0:27:4.01:4,0,273	0/0:16,1:17:7.01:0,7,42	0/0:15,0:11:6.04:0,6,71	0/0:28,1:26:4.89:0,5,307	0/0:26,1:21:21.13:0,21,191	0/0:28,1:28:8.33:0,8,75	0/1:38,0:32:41.86:42,0,54	0/1:29,1:24:59.51:60,0,77	0/1:22,0:17:59.62:60,0,90	0/1:22,0:17:53.98:54,0,89	0/0:15,0:15:6.27:0,6,45	0/1:66,0:44:0.46:0,0,1	0/1:13,1:13:9.37:9,0,33	0/1:25,0:23:11.17:45,0,11	0/0:43,0:39:5.88:0,6,47	0/1:22,0:17:8.02:59,0,8	0/1:40,0:37:26.46:26,0,244	0/1:18,1:18:14.48:14,0,46	0/0:11,0:10:8.56:0,9,46
chr10	11036665	.	A	AGT	3784.61	PASS	AB=0.955;AC=43;AF=0.768;AN=56;BaseQRankSum=5.120;DP=885;FS=11.478;HRun=0;HaplotypeScore=183.3559;InbreedingCoeff=0.0148;MQ=29.84;MQ0=100;MQRankSum=6.005;QD=5.41;ReadPosRankSum=1.775;VQSLOD=2.6392;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:28,1:26:6.38:75,6,0	1/1:10,1:9:9.03:126,9,0	0/0:92,0:19:39.52:0,40,408	0/0:93,0:18:50.60:0,51,505	1/1:14,2:15:4.20:22,4,0	1/1:29,2:28:11.22:88,11,0	0/1:31,0:26:21.30:84,0,21	0/1:31,0:19:98.90:217,0,99	0/1:24,0:19:14.99:50,0,15	1/1:30,5:28:53.18:601,53,0	1/1:13,3:17:9.03:123,9,0	1/1:16,0:12:4.59:77,5,0	0/1:29,0:26:9.90:174,0,10	1/1:27,0:21:14.68:119,15,0	0/1:24,3:28:27.75:82,0,28	1/1:35,1:32:15.50:195,16,0	0/1:27,2:24:6.91:288,0,7	0/1:22,0:18:7.95:242,0,8	0/1:21,0:19:99:142,0,135	0/1:18,0:17:6.38:61,0,6	1/1:68,0:48:2.67:23,3,0	1/1:13,0:12:6:58,6,0	1/1:23,1:22:8.75:121,9,0	1/1:39,3:39:6.09:90,6,0	1/1:15,6:17:8.99:71,9,0	1/1:36,2:35:32.50:439,33,0	1/1:16,1:16:14.29:177,14,0	1/1:11,0:10:5.50:40,6,0
chr10	11036678	.	GTGAC	G	2339.15	PASS	AB=0.996;AC=37;AF=0.661;AN=56;BaseQRankSum=4.288;DP=817;FS=58.408;HRun=0;HaplotypeScore=184.8587;InbreedingCoeff=0.1830;MQ=34.88;MQ0=75;MQRankSum=5.688;QD=3.94;ReadPosRankSum=5.200;VQSLOD=0.8056;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:28,1:27:0.73:29,0,1	1/1:9,0:8:9.02:101,9,0	0/0:105,0:20:45.90:0,46,598	0/1:113,0:27:63.15:63,0,669	1/1:17,0:17:0.01:74,0,0	1/1:28,0:27:12.07:83,12,0	1/1:29,0:26:25.40:191,25,0	0/0:34,0:25:9.83:0,10,345	0/1:19,0:16:1.61:46,0,2	1/1:27,2:28:12.21:348,12,0	1/1:12,0:12:8.83:90,9,0	0/1:12,0:11:9.42:30,0,9	0/1:23,0:21:3.01:3,0,28	0/1:22,0:18:22.01:22,0,54	1/1:21,1:21:7.26:73,7,0	1/1:29,1:27:17.87:199,18,0	0/1:24,0:19:4.05:160,0,4	1/1:18,0:15:22.70:236,23,0	0/1:21,0:17:13.76:14,0,236	0/0:17,0:16:9.87:0,10,50	0/0:58,0:44:4.74:0,5,25	0/0:9,0:8:0.34:0,0,14	1/1:19,0:18:9.03:88,9,0	1/1:43,1:42:5.46:68,5,0	0/1:21,0:19:32.54:41,0,33	1/1:30,0:29:34.66:421,35,0	1/1:15,0:16:1.32:112,1,0	1/1:6,0:5:3.26:10,3,0
chr10	11036680	.	GAC	G	3668.73	PASS	AB=0.925;AC=39;AF=0.696;AN=56;BaseQRankSum=3.908;DP=793;FS=46.459;HRun=0;HaplotypeScore=168.7678;InbreedingCoeff=0.0573;MQ=35.54;MQ0=74;MQRankSum=4.913;QD=6.01;ReadPosRankSum=6.547;VQSLOD=1.0857;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:20,7:25:0.85:41,0,1	1/1:3,5:7:8.81:105,9,0	0/0:110,1:22:52.95:0,53,629	0/1:114,3:27:63.01:63,0,632	1/1:14,3:17:0.01:68,0,0	1/1:14,14:27:12.19:117,12,0	1/1:19,10:26:18.54:250,19,0	0/1:31,1:24:1.83:2,0,242	0/1:14,2:15:11.82:79,0,12	1/1:22,6:26:36.93:475,37,0	1/1:4,7:11:8.93:129,9,0	0/1:8,0:11:5.19:30,0,5	1/1:16,0:20:2.07:22,2,0	0/1:8,0:16:19.03:38,0,19	0/1:15,5:19:21.10:85,0,21	1/1:7,21:25:18.01:259,18,0	0/1:14,7:18:25.02:273,0,25	1/1:4,13:15:22.93:333,23,0	0/1:21,0:17:42.05:42,0,200	0/0:16,1:16:7.92:0,8,38	0/0:51,4:43:5.88:0,6,30	0/1:5,0:7:5.31:5,0,9	1/1:4,15:18:9.10:132,9,0	1/1:13,28:39:5.81:95,6,0	0/1:20,0:18:10.04:54,0,10	1/1:4,22:25:54.82:682,55,0	1/1:13,5:18:15.62:206,16,0	1/1:0,5:5:6.02:83,6,0
chr10	11036681	.	ACT	A	1836.86	PASS	AB=0.992;AC=40;AF=0.714;AN=56;BaseQRankSum=3.204;DP=785;FS=38.753;HRun=0;HaplotypeScore=173.3265;InbreedingCoeff=-0.0595;MQ=35.84;MQ0=72;MQRankSum=5.413;QD=3.31;ReadPosRankSum=4.582;VQSLOD=1.1934;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:25:12.36:12,0,17	1/1:8,0:7:4.21:40,4,0	0/0:112,0:22:41.33:0,41,421	0/0:117,0:28:9.68:0,10,615	1/1:17,0:17:17.33:126,17,0	1/1:28,0:27:0.93:40,1,0	1/1:27,1:26:12.84:124,13,0	0/1:29,0:23:61.43:61,0,125	0/1:15,1:15:13.65:41,0,14	0/1:27,0:25:45.12:108,0,45	1/1:11,0:11:8.53:54,9,0	1/1:11,1:11:5.87:39,6,0	1/1:21,0:20:3.92:78,4,0	0/1:18,0:16:27.81:34,0,28	0/1:19,0:19:0.33:35,0,0	1/1:27,0:25:10.18:123,10,0	0/1:21,0:18:4.06:125,0,4	1/1:18,0:15:26.61:189,27,0	0/1:20,0:17:64.33:64,0,109	0/1:17,0:16:4.52:25,0,5	0/1:52,2:43:8.59:19,0,9	1/1:8,0:7:5.73:33,6,0	1/1:18,0:17:8.78:58,9,0	0/1:41,0:39:1.83:36,0,2	1/1:18,0:17:19.94:116,20,0	1/1:26,0:25:20.94:280,21,0	0/1:18,0:18:3.21:88,0,3	1/1:5,0:5:5.87:40,6,0
chr10	11036682	.	CTG	C	2614.81	PASS	AB=0.778;AC=49;AF=0.875;AN=56;BaseQRankSum=1.695;DP=796;FS=10.659;HRun=0;HaplotypeScore=173.9347;InbreedingCoeff=0.5072;MQ=35.95;MQ0=71;MQRankSum=2.018;QD=4.68;ReadPosRankSum=2.260;VQSLOD=2.5480;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:26:5.90:24,6,0	1/1:8,0:7:5.34:22,5,0	0/0:114,0:22:8.72:0,9,147	0/0:117,0:30:34.65:0,35,470	1/1:14,3:17:18.05:208,18,0	1/1:23,0:27:11.19:54,11,0	1/1:26,0:26:23.39:110,23,0	1/1:19,8:23:26.21:299,26,0	1/1:7,0:15:11.08:54,11,0	1/1:18,0:25:37.54:170,38,0	1/1:12,0:12:8.02:35,8,0	1/1:10,2:11:11.70:115,12,0	1/1:13,9:20:29.83:290,30,0	1/1:14,4:16:7.72:114,8,0	1/1:16,0:20:8.03:36,8,0	1/1:27,0:26:17.88:79,18,0	1/1:20,0:19:24.10:108,24,0	1/1:18,0:15:15.62:63,16,0	0/1:15,5:18:1.08:217,0,1	1/1:8,9:16:9.01:107,9,0	1/1:27,29:44:5.52:72,6,0	1/1:7,1:7:11.97:119,12,0	1/1:18,0:17:7.73:32,8,0	1/1:39,0:39:7.23:33,7,0	1/1:13,7:17:19.30:217,19,0	1/1:24,0:25:25.52:122,26,0	1/1:8,0:18:1.05:38,1,0	0/0:5,0:5:0:0,0,0
chr10	11037017	.	C	CT	1044.02	PASS	AB=1.000;AC=49;AF=0.875;AN=56;BaseQRankSum=0.229;DP=431;FS=3.622;HRun=18;HaplotypeScore=95.6370;InbreedingCoeff=0.1861;MQ=56.31;MQ0=7;MQRankSum=1.030;QD=2.55;ReadPosRankSum=-0.548;VQSLOD=-0.5572;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:21:19.37:79,19,0	1/1:4,1:5:7.14:41,7,0	0/1:24,0:6:2.23:2,0,9	0/0:22,0:8:0.97:0,1,18	1/1:13,0:13:3.31:19,3,0	1/1:20,0:19:13.92:66,14,0	1/1:10,0:10:1.22:2,1,0	0/1:27,0:28:6.60:7,0,41	1/1:11,0:11:5.96:45,6,0	1/1:22,1:25:28.27:135,28,0	1/1:3,4:7:5.90:38,6,0	1/1:7,0:7:6.57:33,7,0	1/1:18,0:18:22.19:119,22,0	1/1:18,0:18:9.16:46,9,0	1/1:18,0:18:15.04:63,15,0	1/1:16,0:16:20.52:99,21,0	1/1:23,0:20:6.36:29,6,0	1/1:15,1:15:4.60:43,5,0	0/1:29,0:28:28:28,0,47	0/1:13,0:14:5.83:6,0,49	0/1:4,0:5:1.50:2,0,15	1/1:7,0:6:2.92:17,3,0	1/1:10,0:9:8.76:37,9,0	1/1:8,0:8:6.14:31,6,0	1/1:14,0:13:2.30:7,2,0	1/1:13,0:13:5.75:21,6,0	1/1:13,0:12:19.48:104,19,0	1/1:9,0:10:8.16:50,8,0
chr10	11037035	.	TGGTC	T	3865.48	PASS	AB=0.914;AC=37;AF=0.661;AN=56;BaseQRankSum=-4.264;DP=389;FS=1.537;HRun=0;HaplotypeScore=85.8315;InbreedingCoeff=-0.3772;MQ=47.29;MQ0=15;MQRankSum=-0.744;QD=10.45;ReadPosRankSum=-1.984;VQSLOD=2.6682;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:14,1:13:8.60:135,0,9	0/1:4,0:4:22.57:47,0,23	0/1:17,0:3:9.36:9,0,48	0/0:19,0:5:9.18:0,9,61	0/1:10,1:11:19.86:125,0,20	0/1:19,0:18:24.31:107,0,24	1/1:9,0:9:2.04:52,2,0	0/1:18,1:22:35.20:250,0,35	1/1:8,2:10:22.37:209,22,0	0/1:18,1:20:76.84:173,0,77	0/1:8,0:8:4.59:53,0,5	1/1:3,1:4:11.77:141,12,0	0/1:17,0:19:1.13:333,0,1	1/1:14,0:16:13.64:142,14,0	1/1:15,3:17:1.53:209,2,0	0/1:14,0:15:54.39:54,0,79	0/1:20,2:17:95.28:196,0,95	0/1:13,0:13:20.60:124,0,21	0/1:20,2:23:39.51:305,0,40	1/1:13,1:16:15.05:279,15,0	0/1:7,0:6:5.42:28,0,5	1/1:3,0:2:2.97:20,3,0	0/1:9,0:8:13.02:51,0,13	1/1:7,0:7:11.23:125,11,0	1/1:13,1:12:22.11:222,22,0	0/1:5,6:11:47.16:198,0,47	1/1:14,1:15:4.09:140,4,0	0/1:12,1:12:23.78:141,0,24
chr10	11037913	.	C	CTT	7194.47	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-3.997;DP=372;FS=36.364;HRun=11;HaplotypeScore=52.5421;InbreedingCoeff=0.5824;MQ=67.50;MQ0=1;MQRankSum=-1.922;QD=20.56;ReadPosRankSum=0.078;VQSLOD=1.3103;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,19:25:47.13:616,47,0	1/1:1,3:4:6.02:87,6,0	0/0:8,0:7:11.96:0,12,104	0/0:14,0:13:20.07:0,20,149	1/1:4,5:10:13.86:172,14,0	1/1:5,5:12:18.06:246,18,0	1/1:3,7:12:2.29:317,2,0	1/1:12,13:28:52.41:574,52,0	1/1:2,3:5:3.01:43,3,0	1/1:10,5:15:19.88:261,20,0	1/1:2,6:8:18.02:237,18,0	1/1:7,3:19:13.19:236,13,0	1/1:3,0:10:17.52:159,18,0	1/1:9,0:13:16.81:152,17,0	1/1:3,7:10:15.52:219,16,0	1/1:6,10:18:32.04:384,32,0	1/1:2,14:26:41.55:402,42,0	1/1:3,19:24:50.10:645,50,0	1/1:1,3:5:12.02:139,12,0	1/1:1,6:7:18.06:251,18,0	1/1:4,13:20:32.08:408,32,0	1/1:6,0:7:12.03:131,12,0	1/1:2,4:7:15.01:186,15,0	1/1:5,20:29:33.74:706,34,0	1/1:1,1:3:3.01:43,3,0	1/1:5,8:15:0.46:301,0,0	1/1:3,7:13:14.36:148,14,0	1/1:0,3:3:9.03:130,9,0
chr10	11039170	.	TC	T	13132.42	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-3.948;DP=526;FS=3.541;HRun=7;HaplotypeScore=55.8998;InbreedingCoeff=0.9851;MQ=71.79;MQ0=0;MQRankSum=-6.213;QD=25.90;ReadPosRankSum=3.787;VQSLOD=5.5523;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,19:21:57.13:581,57,0	1/1:2,11:13:30.07:306,30,0	0/0:9,0:9:24.96:0,25,301	0/0:10,0:10:24.02:0,24,275	1/1:0,14:14:42.02:407,42,0	1/1:0,11:11:24.05:245,24,0	1/1:1,27:28:72.16:735,72,0	1/1:2,13:15:36.06:361,36,0	1/1:1,19:20:54.12:551,54,0	1/1:2,15:17:45.06:449,45,0	1/1:1,10:11:30.02:295,30,0	1/1:4,19:23:51.11:520,51,0	1/1:1,15:16:42.09:428,42,0	1/1:3,23:26:69.16:703,69,0	1/1:1,15:16:36.08:367,36,0	1/1:0,11:11:24.05:245,24,0	1/1:2,26:28:75.17:765,75,0	1/1:0,33:33:84.19:857,84,0	1/1:4,9:13:27.05:275,27,0	1/1:2,8:10:24.05:245,24,0	1/1:2,36:38:87.19:887,87,0	1/1:0,19:19:51.12:520,51,0	1/1:0,11:11:27.06:275,27,0	1/1:2,37:39:99:1071,105,0	1/1:1,15:16:42.10:429,42,0	1/1:0,25:25:75.16:758,75,0	1/1:4,23:27:69.14:704,69,0	1/1:0,6:6:15.03:153,15,0
chr10	11039229	.	CGGCTGGCGGCCAG	C	3800.35	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=9.752;DP=563;FS=6.993;HRun=0;HaplotypeScore=217.4023;InbreedingCoeff=0.9683;MQ=78.82;MQ0=0;MQRankSum=-6.705;QD=63.34;ReadPosRankSum=-1.856;VQSLOD=2.2745;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,99,4605	0/0:7,0:7:21.07:0,21,1061	0/0:11,0:11:20.57:0,21,1080	0/0:16,0:17:45.15:0,45,1805	0/0:16,0:16:45.14:0,45,1751	0/0:17,0:16:45.15:0,45,2571	0/0:33,0:33:96.33:0,96,5708	1/1:6,24:30:71.70:1943,72,0	0/0:18,0:18:48.16:0,48,2362	0/0:17,0:17:45.15:0,45,2300	0/0:7,0:6:18.06:0,18,733	0/0:23,0:23:60.21:0,60,3622	0/0:15,0:15:42.13:0,42,2251	0/0:23,0:23:69.24:0,69,4135	0/0:17,0:17:42.14:0,42,2409	0/0:20,0:20:60.21:0,60,3543	0/0:47,0:47:99:0,138,8369	0/0:42,0:42:99:0,108,6795	1/1:2,2:4:8.99:261,9,0	1/1:0,13:13:30.10:1197,30,0	1/1:5,8:13:11.77:399,12,0	0/0:13,0:13:33.11:0,33,1319	0/0:11,0:11:24.08:0,24,1113	0/0:41,0:41:99:0,114,7206	0/0:16,0:16:48.16:0,48,2429	0/0:28,0:28:78.26:0,78,3850	0/0:21,0:21:54.19:0,54,3452	0/0:9,0:9:27.09:0,27,1769
chr10	11039501	.	TC	T	19186.37	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-1.459;DP=682;FS=0.589;HRun=5;HaplotypeScore=83.9853;InbreedingCoeff=0.9828;MQ=85.05;MQ0=0;MQRankSum=-10.822;QD=30.12;ReadPosRankSum=6.030;VQSLOD=4.8100;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,44:46:99:1293,114,0	1/1:2,8:10:24.07:272,24,0	0/0:24,0:24:66.17:0,66,851	0/0:21,0:21:60.20:0,60,803	1/1:0,14:14:36.10:408,36,0	1/1:3,30:33:84.24:953,84,0	1/1:2,24:26:69.20:783,69,0	1/1:2,34:36:99:1138,102,0	1/1:0,27:27:78.22:885,78,0	1/1:1,22:23:69.18:771,69,0	1/1:0,17:17:48.14:544,48,0	1/1:1,32:33:93.27:1055,93,0	1/1:1,23:24:66.19:749,66,0	1/1:0,23:23:66.19:749,66,0	1/1:2,26:28:72.21:817,72,0	1/1:1,33:34:81.23:919,81,0	1/1:2,35:37:99:1157,102,0	1/1:1,22:23:63.18:715,63,0	1/1:4,20:24:57.14:636,57,0	1/1:1,13:14:36.10:407,36,0	1/1:4,22:26:63.18:715,63,0	1/1:1,12:13:30.56:341,31,0	1/1:0,14:14:39.11:442,39,0	1/1:3,31:34:93.27:1055,93,0	1/1:3,10:13:33.08:366,33,0	1/1:1,31:32:90.21:997,90,0	1/1:0,26:26:78.22:885,78,0	1/1:3,4:7:12.03:136,12,0
chr10	11039789	.	AT	A	6572.03	PASS	AB=0.609;AC=43;AF=0.768;AN=56;BaseQRankSum=6.631;DP=487;FS=11.704;HRun=11;HaplotypeScore=57.2493;InbreedingCoeff=0.9103;MQ=72.20;MQ0=1;MQRankSum=0.471;QD=17.48;ReadPosRankSum=5.196;VQSLOD=4.8272;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,29:35:76.93:622,77,0	0/1:5,9:14:2.05:191,0,2	0/0:14,1:13:20.25:0,20,154	0/0:12,0:9:15.29:0,15,135	1/1:4,18:22:50.13:401,50,0	1/1:6,22:28:62.79:517,63,0	1/1:2,10:13:25.99:203,26,0	0/0:40,0:40:87.19:0,87,902	1/1:3,9:12:23.97:197,24,0	1/1:6,12:18:35.93:295,36,0	1/1:3,10:13:26.94:221,27,0	1/1:1,6:7:11.97:99,12,0	1/1:3,11:14:17.95:148,18,0	1/1:3,11:14:26.96:221,27,0	1/1:6,14:20:32.95:271,33,0	1/1:1,20:21:41.95:345,42,0	1/1:2,19:21:47.94:394,48,0	1/1:1,15:16:44.94:369,45,0	0/0:17,1:18:23.47:0,23,440	0/0:18,0:18:39.98:0,40,411	0/0:7,0:7:12.03:0,12,128	1/1:0,6:6:11.97:98,12,0	1/1:1,15:16:35.94:295,36,0	1/1:0,15:15:38.96:320,39,0	1/1:2,19:21:47.92:393,48,0	1/1:3,15:18:44.92:369,45,0	1/1:0,21:23:57.79:455,58,0	1/1:2,7:9:17.98:148,18,0
chr10	11041055	.	GGTGA	G	5759.62	PASS	AB=0.982;AC=27;AF=0.519;AN=52;BaseQRankSum=7.501;DP=760;FS=9.746;HRun=0;HaplotypeScore=148.2421;InbreedingCoeff=0.7789;MQ=68.69;MQ0=3;MQRankSum=2.111;QD=14.19;ReadPosRankSum=1.692;VQSLOD=4.1546;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:75.23:0,75,1642	1/1:11,6:17:21.07:322,21,0	./.	0/1:20,0:19:0:0,0,0	0/0:12,0:20:27.09:0,27,480	0/0:17,0:17:27.09:0,27,629	0/1:41,0:41:51.53:52,0,638	./.	0/0:25,0:25:48.15:0,48,1009	1/1:19,11:29:36.12:551,36,0	1/1:7,4:11:12.04:184,12,0	0/0:27,0:27:42.14:0,42,979	0/0:29,0:29:27.09:0,27,608	0/0:36,0:36:42.14:0,42,950	1/1:19,18:38:39.13:580,39,0	1/1:19,18:37:44.99:690,45,0	1/1:26,20:46:48.15:718,48,0	1/1:16,18:34:45.15:691,45,0	0/0:26,0:27:18.06:0,18,302	0/0:10,0:20:10.18:0,10,206	0/0:30,0:30:21.05:0,21,376	0/1:17,1:18:15.93:16,0,591	1/1:15,5:20:15.05:230,15,0	1/1:13,14:27:36.12:552,36,0	0/0:13,0:19:24.07:0,24,406	1/1:13,17:30:51.15:759,51,0	1/1:13,13:26:23.99:368,24,0	1/1:11,0:11:3.01:46,3,0
chr10	11043051	.	TG	T	2441.01	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=9.506;DP=607;FS=0.994;HRun=2;HaplotypeScore=58.9826;InbreedingCoeff=0.9893;MQ=88.16;MQ0=0;MQRankSum=-0.893;QD=31.29;ReadPosRankSum=2.295;VQSLOD=3.3349;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,99,1458	0/0:9,0:9:24.07:0,24,340	0/0:23,0:23:69.21:0,69,979	0/0:21,0:21:45.55:0,46,739	0/0:10,0:10:27.09:0,27,405	0/0:22,0:22:66.21:0,66,969	0/0:30,0:30:90.30:0,90,1349	0/0:26,0:26:75.25:0,75,1123	0/0:19,0:19:57.17:0,57,814	0/0:19,0:19:57.19:0,57,855	0/0:7,0:7:21.07:0,21,314	1/1:0,20:20:51.17:662,51,0	1/1:0,17:17:45.15:584,45,0	1/1:5,24:29:69.22:889,69,0	0/0:21,0:21:63.19:0,63,904	0/0:16,0:16:48.16:0,48,719	0/0:40,0:40:99:0,120,1798	0/0:36,0:36:99:0,105,1524	0/0:13,0:13:39.13:0,39,584	0/0:11,0:11:33.11:0,33,493	0/0:52,0:52:99:0,157,2314	1/1:0,12:12:36.12:467,36,0	0/0:12,0:12:33.09:0,33,473	0/0:31,0:31:90.30:0,90,1346	0/0:19,0:19:51.13:0,51,692	0/0:30,0:30:90.28:0,90,1291	0/0:23,0:23:66.21:0,66,966	0/0:4,0:4:12.04:0,12,180
chr10	11043450	.	A	AG	1095.95	PASS	AB=1.000;AC=39;AF=0.696;AN=56;BaseQRankSum=-0.935;DP=217;FS=1.989;HRun=14;HaplotypeScore=53.1973;InbreedingCoeff=0.4683;MQ=80.50;MQ0=0;MQRankSum=-5.412;QD=7.46;ReadPosRankSum=1.160;VQSLOD=2.3749;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:4:5.81:47,6,0	1/1:2,0:2:4.17:19,4,0	0/0:17,0:14:25.92:0,26,389	0/0:14,0:12:5.79:0,6,250	1/1:10,0:10:11.49:86,11,0	1/1:2,1:3:6.02:75,6,0	1/1:5,10:17:33.60:362,34,0	1/1:7,0:7:0.60:26,1,0	1/1:2,0:2:5.80:44,6,0	1/1:6,0:6:5.44:37,5,0	0/1:8,0:8:4.96:19,0,5	0/0:16,0:17:2.11:0,2,33	0/1:6,0:6:0.01:0,0,0	1/1:16,0:16:0.89:2,1,0	1/1:5,0:5:7.47:18,7,0	1/1:5,0:5:2.66:38,3,0	1/1:13,0:12:21.03:97,21,0	0/0:4,0:4:1.76:0,2,10	0/0:5,0:5:2.24:0,2,5	0/0:4,0:4:0.89:0,1,2	0/0:9,0:9:8.30:0,8,23	0/1:5,0:5:0:0,0,0	1/1:1,0:1:2.96:19,3,0	1/1:11,0:11:8.10:93,8,0	1/1:7,0:7:16.98:83,17,0	1/1:4,0:5:10.69:68,11,0	1/1:13,0:13:19.95:100,20,0	1/1:1,0:1:1.82:5,2,0
chr10	11043451	.	A	AGG	5278.05	PASS	AB=1.000;AC=46;AF=0.821;AN=56;BaseQRankSum=-3.983;DP=256;FS=1.908;HRun=1;HaplotypeScore=59.9585;InbreedingCoeff=0.5010;MQ=77.71;MQ0=0;MQRankSum=-6.386;QD=24.32;ReadPosRankSum=-0.441;VQSLOD=3.0727;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,0:9:11.48:96,11,0	1/1:1,2:3:9.03:169,9,0	0/0:15,0:15:40.12:0,40,480	0/0:14,0:12:26.98:0,27,350	1/1:3,8:13:33.11:599,33,0	1/1:4,0:4:6.02:76,6,0	1/1:22,0:22:46.27:526,46,0	1/1:8,0:8:9.83:83,10,0	1/1:2,0:2:5.42:23,5,0	1/1:5,4:9:21.07:393,21,0	1/1:1,7:8:9.03:172,9,0	0/1:18,0:18:14.95:49,0,15	1/1:5,0:5:0.47:1,0,0	1/1:18,0:18:3.90:40,4,0	1/1:0,5:6:15.05:289,15,0	1/1:1,5:7:14.83:252,15,0	1/1:2,12:13:33.10:631,33,0	1/1:1,4:5:5.99:79,6,0	0/1:7,0:7:0.21:0,0,0	0/0:3,0:3:0.47:0,0,1	1/1:10,0:10:6.18:29,6,0	0/0:5,0:5:0.47:0,0,2	1/1:2,1:3:5.98:56,6,0	1/1:4,10:15:27.51:472,28,0	1/1:1,6:7:21.07:398,21,0	1/1:2,4:6:12.04:230,12,0	1/1:4,13:17:29.80:558,30,0	1/1:0,1:1:3.01:58,3,0
chr10	11055042	.	T	TC	1074.93	PASS	AB=0.823;AC=12;AF=0.214;AN=56;BaseQRankSum=-1.492;DP=447;FS=5.986;HRun=9;HaplotypeScore=58.0728;InbreedingCoeff=0.3780;MQ=71.25;MQ0=0;MQRankSum=0.478;QD=8.67;ReadPosRankSum=-1.580;VQSLOD=1.3444;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,16:21:30.08:332,30,0	0/1:2,0:2:0:0,0,0	0/1:8,0:9:10.90:11,0,66	0/0:11,0:10:9.29:0,9,69	0/1:7,2:9:14.19:69,0,14	1/1:1,14:15:1.02:239,1,0	0/1:7,16:23:18.98:252,0,19	0/0:16,0:16:26.98:0,27,234	0/1:4,10:14:11.18:118,0,11	0/0:11,0:11:14.98:0,15,130	0/0:8,0:8:11.97:0,12,99	0/0:17,0:17:32.98:0,33,285	0/1:16,1:17:7.73:8,0,313	0/0:23,0:23:59.94:0,60,510	0/0:20,0:20:44.97:0,45,387	0/0:21,0:21:50.97:0,51,438	0/0:32,0:33:89.01:0,89,760	0/0:13,0:13:32.98:0,33,286	0/0:19,0:20:43.98:0,44,364	0/0:10,0:10:14.99:0,15,130	0/0:24,0:24:56.97:0,57,494	0/0:12,0:12:20.97:0,21,178	0/0:10,0:9:14.86:0,15,118	0/0:25,0:26:62:0,62,525	1/1:11,3:14:18.05:199,18,0	0/0:18,0:18:23.97:0,24,208	0/0:24,0:24:59.91:0,60,505	0/0:6,0:6:11.98:0,12,104
chr10	11055302	.	G	GCT	4807.34	PASS	AB=0.950;AC=36;AF=0.643;AN=56;BaseQRankSum=-2.599;DP=542;FS=63.333;HRun=0;HaplotypeScore=131.7859;InbreedingCoeff=0.1873;MQ=62.28;MQ0=2;MQRankSum=-1.486;QD=10.95;ReadPosRankSum=1.896;VQSLOD=2.3953;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:2.35:0,2,8	1/1:8,0:8:3.38:8,3,0	0/0:23,0:15:29.95:0,30,453	0/0:24,0:10:9.54:0,10,262	1/1:9,0:9:2.51:7,3,0	0/1:13,0:13:1.81:21,0,2	1/1:25,0:25:5.24:30,5,0	1/1:2,15:17:48.10:708,48,0	0/0:17,0:16:5.12:0,5,42	0/1:17,0:17:14.48:29,0,14	0/1:18,0:18:0.86:1,0,28	1/1:40,1:42:93.39:1285,93,0	1/1:21,1:21:47.24:668,47,0	1/1:21,3:24:60.67:929,61,0	1/1:26,0:26:4.60:21,5,0	0/1:39,0:39:18.16:18,0,20	0/1:16,0:16:12.35:12,0,24	0/1:24,0:24:3.79:4,0,70	1/1:3,17:20:56.55:852,57,0	1/1:3,9:11:6.02:95,6,0	1/1:4,22:26:3.01:47,3,0	0/1:0,16:16:0.16:0,0,0	1/1:11,0:10:3.69:14,4,0	0/0:18,0:18:0.70:0,1,1	1/1:13,0:13:1.92:5,2,0	0/1:21,0:21:24.37:36,0,24	0/1:6,0:6:1.44:1,0,21	0/1:14,0:14:16.08:16,0,29
chr10	11055349	.	AGCGAGAGCGC	A	3797.19	PASS	AB=1.000;AC=32;AF=0.640;AN=50;BaseQRankSum=-1.068;DP=516;FS=7.161;HRun=0;HaplotypeScore=166.5082;InbreedingCoeff=0.2132;MQ=51.87;MQ0=40;MQRankSum=-3.640;QD=11.98;ReadPosRankSum=-0.874;VQSLOD=2.0680;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:9,0:9:3.81:13,4,0	./.	0/0:57,0:15:41.76:0,42,738	0/0:71,0:24:48.44:0,48,947	0/1:5,0:4:0.13:0,0,0	0/0:11,0:9:1.80:0,2,9	./.	1/1:22,0:19:50.17:800,50,0	0/1:10,0:10:61.77:62,0,89	0/1:9,0:7:54.72:55,0,65	0/1:10,0:9:0.01:0,0,1	1/1:6,35:40:4.52:239,5,0	1/1:27,0:25:1.45:49,1,0	1/1:38,1:39:78.27:1478,78,0	0/0:16,0:15:1.41:0,1,3	1/1:21,0:20:8.31:176,8,0	1/1:16,0:14:0.92:67,1,0	0/0:7,0:7:3.01:0,3,36	1/1:10,0:10:2.68:373,3,0	1/1:11,0:8:2.80:19,3,0	1/1:27,0:24:6.79:36,7,0	1/1:16,0:16:8.50:199,9,0	1/1:9,0:8:2:8,2,0	0/0:21,0:19:0.47:0,0,1	./.	0/1:12,0:11:40.79:125,0,41	0/1:14,0:13:30.65:59,0,31	1/1:6,0:5:3.01:39,3,0
chr10	11055351	.	C	CGAGAGTGTGT	1356.11	PASS	AB=1.000;AC=22;AF=0.393;AN=56;BaseQRankSum=6.192;DP=527;FS=12.851;HRun=0;HaplotypeScore=188.9391;InbreedingCoeff=0.1614;MQ=51.66;MQ0=41;MQRankSum=-5.611;QD=5.51;ReadPosRankSum=2.325;VQSLOD=2.0372;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:0.32:0,0,0	0/0:2,0:2:0:0,0,0	0/0:58,0:16:25.61:0,26,803	0/0:73,0:26:45.42:0,45,1063	0/1:5,0:4:0:0,0,0	1/1:11,0:9:8.43:140,8,0	1/1:7,0:5:6.02:102,6,0	0/0:25,0:22:44.11:0,44,368	0/1:10,0:10:62.15:97,0,62	0/1:9,0:7:10.78:164,0,11	0/1:10,0:9:0:1,0,0	0/1:42,0:40:28.24:28,0,274	0/0:27,0:25:6.02:0,6,132	0/1:41,0:40:40.34:40,0,1023	0/0:16,0:15:1.40:0,1,2	1/1:21,0:20:14.25:194,14,0	0/1:15,0:13:1.29:142,0,1	1/1:7,0:7:5.99:63,6,0	0/0:16,0:15:6.58:0,7,244	0/0:12,0:9:2.91:0,3,67	1/1:27,0:24:0.20:6,0,0	0/0:14,0:14:9.08:0,9,191	1/1:9,0:8:3:28,3,0	0/0:9,11:19:0.47:0,0,1	0/0:7,0:6:2.90:0,3,16	0/1:12,0:11:61.99:238,0,62	0/1:14,0:13:4.58:120,0,5	0/1:6,0:5:17.09:140,0,17
chr10	11055355	.	AGCGC	A	2654.66	PASS	AB=1.000;AC=34;AF=0.680;AN=50;BaseQRankSum=1.458;DP=521;FS=2.445;HRun=0;HaplotypeScore=155.4288;InbreedingCoeff=0.3503;MQ=52.18;MQ0=38;MQRankSum=-5.280;QD=8.07;ReadPosRankSum=0.687;VQSLOD=2.7695;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,0:9:2.34:10,2,0	./.	0/0:60,0:17:47.13:0,47,855	0/0:74,0:27:58.56:0,59,1223	0/1:5,0:4:0.06:0,0,0	1/1:11,0:9:1.38:2,1,0	./.	1/1:24,0:21:45.32:452,45,0	0/1:11,0:11:24.43:25,0,24	0/1:9,0:7:13.25:37,0,13	0/1:9,0:9:0.11:0,0,0	1/1:37,5:40:21.07:358,21,0	1/1:3,24:25:6.02:100,6,0	1/1:38,2:39:73.78:1071,74,0	0/0:16,0:15:1.31:0,1,2	1/1:20,0:19:5.83:63,6,0	0/1:15,0:13:16.25:59,0,16	0/0:1,0:7:2.95:0,3,19	1/1:17,1:17:39.32:348,39,0	1/1:10,1:9:5.47:30,5,0	1/1:25,0:22:0.46:2,0,0	1/1:12,0:12:8.87:126,9,0	1/1:9,0:8:1.25:3,1,0	0/0:18,0:18:0:0,0,0	./.	1/1:12,0:11:5.52:59,6,0	1/1:14,0:13:5.38:43,5,0	0/1:6,0:5:0:0,0,0
chr10	11055861	.	C	CGCGCGCGCGCCCAAGCGT	21697.01	PASS	AB=0.791;AC=50;AF=0.893;AN=56;BaseQRankSum=-1.254;DP=436;FS=0.834;HRun=0;HaplotypeScore=181.5936;InbreedingCoeff=0.4860;MQ=53.19;MQ0=13;MQRankSum=-5.491;QD=53.57;ReadPosRankSum=-1.149;VQSLOD=4.2742;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,7:28:27.17:948,27,0	1/1:8,0:8:18.95:687,19,0	0/0:13,0:9:26.29:0,26,940	0/0:18,0:13:30.10:0,30,1238	1/1:12,4:19:8.61:178,9,0	1/1:10,4:15:25.44:829,25,0	1/1:22,8:33:44.30:1702,44,0	1/1:22,0:23:63.13:3369,63,0	1/1:9,0:7:6.48:172,6,0	1/1:15,0:15:31.34:1258,31,0	0/1:7,0:8:9.16:85,0,9	1/1:16,0:22:27.51:611,28,0	1/1:7,0:10:15.44:711,15,0	1/1:19,0:27:24.29:940,24,0	1/1:12,0:15:17.82:476,18,0	1/1:6,7:13:11.77:494,12,0	1/1:7,5:12:15.05:913,15,0	1/1:18,5:26:11.44:2662,11,0	1/1:8,0:8:21.06:692,21,0	1/1:1,0:5:3.01:47,3,0	1/1:25,1:23:20.47:423,20,0	1/1:13,0:12:9.92:242,10,0	0/1:5,0:9:63.09:211,0,63	1/1:9,1:12:7.38:185,7,0	1/1:9,4:12:24.08:688,24,0	1/1:12,0:17:44.75:1970,45,0	1/1:9,0:9:21.07:890,21,0	1/1:3,0:2:6.02:313,6,0
chr10	11056234	.	TC	T	15369.55	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-7.128;DP=579;FS=0.000;HRun=5;HaplotypeScore=65.7903;InbreedingCoeff=0.9101;MQ=78.21;MQ0=0;MQRankSum=-8.236;QD=28.41;ReadPosRankSum=5.465;VQSLOD=4.8115;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,36:37:93.27:1054,93,0	1/1:0,8:8:21.06:237,21,0	0/0:15,0:14:36.11:0,36,459	0/0:23,0:22:43.96:0,44,508	1/1:0,10:10:18.05:204,18,0	1/1:3,21:24:54.15:612,54,0	1/1:5,23:28:60.17:680,60,0	1/1:0,25:25:68.87:734,69,0	1/1:1,20:21:57.16:646,57,0	1/1:0,13:13:36.09:398,36,0	1/1:0,14:14:42.12:476,42,0	1/1:2,28:30:81.23:917,81,0	1/1:2,17:19:45.13:509,45,0	1/1:0,22:22:54.15:611,54,0	1/1:0,22:22:60.17:680,60,0	1/1:2,19:21:51.14:578,51,0	1/1:2,26:28:72.21:816,72,0	1/1:0,30:30:75.21:850,75,0	1/1:1,19:20:59.95:617,60,0	1/1:1,10:11:27.08:303,27,0	1/1:2,38:40:93.27:1054,93,0	1/1:0,14:14:32.70:373,33,0	1/1:2,10:12:30.09:340,30,0	1/1:3,32:35:81.23:918,81,0	1/1:2,11:13:30.04:325,30,0	1/1:0,24:24:72.17:791,72,0	1/1:0,19:19:54.15:611,54,0	1/1:0,1:1:3.01:34,3,0
chr10	11056421	.	CT	C	2451.71	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=6.042;DP=380;FS=0.000;HRun=2;HaplotypeScore=45.9594;InbreedingCoeff=0.8679;MQ=90.80;MQ0=1;MQRankSum=-1.974;QD=31.43;ReadPosRankSum=-0.238;VQSLOD=2.9546;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,17:17:51.17:707,51,0	0/0:4,0:4:12.04:0,12,191	0/0:22,0:21:47.92:0,48,861	0/1:13,0:12:8.21:8,0,300	0/0:11,0:11:33.11:0,33,528	1/1:0,24:24:66.22:917,66,0	1/1:1,13:14:42.13:564,42,0	0/0:20,0:20:54.17:0,54,824	1/1:0,10:10:30.10:419,30,0	0/0:15,0:15:45.15:0,45,720	0/0:10,0:10:27.09:0,27,415	0/0:13,0:13:33.11:0,33,521	0/0:12,0:12:36.12:0,36,576	0/0:13,0:13:39.13:0,39,621	0/0:13,0:13:39.13:0,39,624	0/0:15,0:15:45.15:0,45,720	0/0:22,0:22:63.21:0,63,1007	0/0:14,0:14:42.14:0,42,672	0/0:9,0:9:27.09:0,27,432	0/0:5,0:5:15.05:0,15,240	0/0:21,0:21:60.20:0,60,959	0/0:14,0:14:42.13:0,42,632	0/0:11,0:11:30.10:0,30,474	0/0:15,0:15:45.15:0,45,720	0/0:10,0:10:30.10:0,30,478	0/0:13,0:13:39.12:0,39,600	0/0:15,0:15:45.15:0,45,716	0/0:5,0:5:15.05:0,15,240
chr10	11056453	.	G	GA	1008.91	PASS	AB=0.752;AC=15;AF=0.268;AN=56;BaseQRankSum=-2.762;DP=357;FS=1.276;HRun=0;HaplotypeScore=56.8286;InbreedingCoeff=0.6299;MQ=84.45;MQ0=1;MQRankSum=2.917;QD=8.01;ReadPosRankSum=2.639;VQSLOD=3.2292;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:32.73:0,33,247	0/0:8,0:8:13.97:0,14,98	0/0:28,0:13:31.09:0,31,225	0/1:27,0:19:13.52:14,0,112	0/0:1,0:1:3:0,3,26	0/0:12,0:12:20.80:0,21,155	0/0:27,0:27:70.73:0,71,523	1/1:2,14:16:37.82:364,38,0	0/0:12,0:12:35.55:0,36,265	0/0:6,0:6:11.68:0,12,85	0/0:5,0:5:14.79:0,15,109	1/1:3,6:10:8.53:54,9,0	1/1:4,5:9:20.60:180,21,0	1/1:4,13:17:10.38:115,10,0	0/0:10,0:10:23.96:0,24,201	0/0:15,0:15:38.82:0,39,308	0/0:31,0:31:60.28:0,60,564	0/0:13,0:13:28.53:0,29,209	1/1:2,7:9:5.86:150,6,0	0/1:3,3:6:18.60:31,0,19	0/1:7,16:23:50.39:148,0,50	1/1:4,5:9:12.49:135,12,0	0/0:8,0:8:17.90:0,18,140	0/0:6,0:6:17.96:0,18,151	0/0:9,0:9:20.95:0,21,175	0/0:8,0:8:14.15:0,14,125	0/0:10,0:10:26.86:0,27,210	0/0:6,0:6:8.90:0,9,62
chr10	11056683	.	T	TGG	2828.03	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-8.378;DP=619;FS=3.685;HRun=6;HaplotypeScore=75.3157;InbreedingCoeff=0.9730;MQ=82.33;MQ0=0;MQRankSum=0.437;QD=33.27;ReadPosRankSum=-3.564;VQSLOD=3.0306;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,117,1382	0/0:7,0:7:15.05:0,15,183	0/0:14,0:14:39.01:0,39,446	0/0:20,0:20:43.94:0,44,482	0/0:6,0:6:11.10:0,11,131	0/0:30,0:30:84.26:0,84,1024	0/0:32,0:32:78.21:0,78,935	1/1:2,16:22:56.63:813,57,0	0/0:21,0:21:54.16:0,54,658	0/0:16,0:16:42.13:0,42,510	0/0:15,0:15:39.11:0,39,475	0/0:27,0:27:75.23:0,75,913	0/0:23,0:23:53.43:0,53,652	0/0:38,0:38:99:0,99,1205	0/0:25,0:24:60.16:0,60,720	0/0:25,0:25:72.23:0,72,878	0/0:31,0:31:84.23:0,84,1009	0/0:35,0:35:99:0,102,1199	1/1:4,8:12:27:346,27,0	1/1:2,12:14:27.09:457,27,0	1/1:5,32:37:84.25:1372,84,0	0/0:18,0:18:45.13:0,45,548	0/0:7,0:7:21.07:0,21,256	0/0:26,0:26:69.21:0,69,842	0/0:10,0:10:12.02:0,12,145	0/0:31,0:31:78.21:0,78,937	0/0:27,0:27:72.22:0,72,878	0/0:7,0:7:18.06:0,18,220
chr10	11057410	.	TCGCCCC	T	963.78	PASS	AC=8;AF=0.154;AN=52;BaseQRankSum=5.826;DP=279;FS=0.000;HRun=0;HaplotypeScore=56.3585;InbreedingCoeff=0.6273;MQ=71.28;MQ0=1;MQRankSum=-6.480;QD=12.20;ReadPosRankSum=0.144;VQSLOD=1.9678;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,10:21:10.27:231,10,0	0/0:2,0:2:3.01:0,3,96	0/0:7,0:5:3.01:0,3,92	0/0:10,0:8:6.02:0,6,109	0/0:5,0:5:12.04:0,12,391	1/1:9,6:15:12.04:253,12,0	1/1:15,15:30:12.04:252,12,0	0/0:10,0:10:9.03:0,9,216	1/1:5,8:13:18.06:370,18,0	./.	0/0:4,0:4:6.02:0,6,197	0/0:7,0:7:15.04:0,15,423	0/0:5,0:5:10.28:0,10,302	0/0:8,0:8:15.04:0,15,423	0/0:7,0:7:6.02:0,6,199	0/0:9,0:9:6.02:0,6,145	0/0:13,0:13:27.09:0,27,879	0/0:23,0:23:51.16:0,51,1553	0/0:10,0:10:9.02:0,9,168	0/0:3,0:3:3.01:0,3,97	0/0:29,0:29:66.23:0,66,2104	0/0:5,0:5:6.02:0,6,199	./.	0/0:9,0:9:21.07:0,21,686	0/0:11,0:11:18.06:0,18,554	0/0:5,0:5:9.03:0,9,238	0/0:7,0:7:12.01:0,12,249	0/0:3,0:3:3.01:0,3,99
chr10	11057810	.	TTAAGTCAG	T	1467.43	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=7.332;DP=570;FS=3.070;HRun=0;HaplotypeScore=141.8337;InbreedingCoeff=0.7036;MQ=66.54;MQ0=0;MQRankSum=-6.023;QD=40.76;ReadPosRankSum=-2.001;VQSLOD=3.3701;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,120,5430	0/0:1,0:1:3.01:0,3,136	0/0:7,0:7:8.86:0,9,180	0/1:4,0:4:24.57:25,0,109	1/1:0,23:23:36.12:988,36,0	0/0:22,0:22:66.21:0,66,2711	0/0:29,0:29:87.26:0,87,3570	0/0:24,0:24:66.23:0,66,2878	0/0:19,0:19:54.19:0,54,2361	0/0:19,0:19:54.19:0,54,2387	0/0:12,0:12:36.12:0,36,1605	0/0:25,0:25:72.23:0,72,2930	0/0:23,0:23:66.23:0,66,2915	0/0:29,0:29:87.28:0,87,3816	0/0:16,0:16:45.15:0,45,1955	0/0:27,0:27:81.28:0,81,3524	0/0:36,0:36:99:0,105,4577	0/0:30,0:30:90.31:0,90,3921	0/0:25,0:25:72.25:0,72,3179	0/0:11,0:11:33.11:0,33,1417	0/0:34,0:34:99:0,102,4498	0/0:13,0:13:39.13:0,39,1705	0/0:10,0:10:30.06:0,30,1230	0/0:20,0:20:60.21:0,60,2626	1/1:2,7:9:21.07:583,21,0	0/0:27,0:27:81.26:0,81,3531	0/0:25,0:25:75.26:0,75,3379	0/0:10,0:10:30.10:0,30,1283
chr10	11060722	.	TATGA	T	4487.09	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-2.883;DP=866;FS=11.694;HRun=0;HaplotypeScore=216.0024;InbreedingCoeff=0.9951;MQ=68.32;MQ0=1;MQRankSum=4.962;QD=24.65;ReadPosRankSum=-0.379;VQSLOD=3.0636;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:35:66.13:0,66,1060	0/0:7,0:12:24.02:0,24,337	0/0:24,0:22:17.98:0,18,336	0/0:20,0:20:26.83:0,27,557	1/1:15,19:34:51.14:793,51,0	0/0:9,0:19:30.08:0,30,501	0/0:23,0:30:44.98:0,45,682	1/1:16,14:30:42.09:619,42,0	0/0:7,0:30:54.18:0,54,945	0/0:33,0:52:99:0,102,1862	0/0:11,0:18:29.84:0,30,369	0/0:15,0:44:69.21:0,69,1163	0/0:20,0:41:45.14:0,45,759	0/0:13,0:32:72.21:0,72,1247	0/0:44,0:69:99:0,120,1824	0/0:29,0:51:99:0,105,1662	0/0:25,0:34:45.42:0,45,650	0/0:17,0:23:24.07:0,24,420	1/1:15,12:27:36.12:563,36,0	1/1:8,21:29:57.19:918,57,0	1/1:15,29:44:72.25:1159,72,0	0/0:10,0:29:59.23:0,59,994	0/0:12,0:19:28.27:0,28,411	0/0:17,0:23:21.46:0,21,287	1/1:6,12:18:27.09:435,27,0	0/0:24,0:46:99:0,108,1908	0/0:9,0:18:38.31:0,38,604	0/0:7,0:11:21.04:0,21,341
chr10	11063244	.	CA	C	23625.69	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=0.433;DP=713;FS=1.905;HRun=2;HaplotypeScore=113.6488;InbreedingCoeff=0.9974;MQ=82.04;MQ0=0;MQRankSum=-10.741;QD=35.53;ReadPosRankSum=5.133;VQSLOD=4.5309;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,31:31:84.27:1090,84,0	1/1:1,16:17:45.62:584,46,0	0/0:30,0:30:87.25:0,87,1213	0/0:18,0:18:48.13:0,48,664	1/1:2,11:13:29.93:389,30,0	1/1:1,18:19:48.16:623,48,0	1/1:0,38:38:99:1364,105,0	1/1:1,34:35:99:1307,102,0	1/1:0,21:21:57.19:740,57,0	1/1:1,21:22:60.19:779,60,0	1/1:0,10:10:30.10:389,30,0	1/1:0,40:40:99:1480,114,0	1/1:0,27:27:75.20:955,75,0	1/1:0,36:36:99:1324,102,0	1/1:2,24:26:69.22:896,69,0	1/1:0,42:42:99:1519,117,0	1/1:2,42:44:99:1596,123,0	1/1:0,29:29:84.27:1090,84,0	1/1:0,22:22:66.20:841,66,0	1/1:1,10:11:27.09:351,27,0	1/1:0,56:56:99:1985,153,0	1/1:1,18:19:39.13:506,39,0	1/1:1,11:12:23.87:311,24,0	1/1:0,27:27:78.25:1012,78,0	1/1:0,13:13:30.10:390,30,0	1/1:0,21:21:63.20:818,63,0	1/1:1,22:23:66.21:857,66,0	1/1:0,11:11:33.11:429,33,0
chr10	11063401	.	GC	G	14687.89	PASS	AC=54;AF=0.964;AN=56;BaseQRankSum=-3.987;DP=618;FS=2.509;HRun=8;HaplotypeScore=70.8784;InbreedingCoeff=0.9947;MQ=82.36;MQ0=1;MQRankSum=-5.894;QD=24.60;ReadPosRankSum=3.789;VQSLOD=5.7130;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,41:45:99:1014,105,0	1/1:1,11:12:27.04:260,27,0	1/1:8,19:26:32.37:504,32,0	0/0:21,0:19:23.32:0,23,365	1/1:1,14:15:39.06:377,39,0	1/1:1,16:17:48.08:464,48,0	1/1:3,25:28:69.11:666,69,0	1/1:3,25:28:75.08:707,75,0	1/1:0,15:15:45.07:435,45,0	1/1:0,22:22:66.10:636,66,0	1/1:1,14:15:39.06:377,39,0	1/1:1,30:31:78.12:752,78,0	1/1:2,15:17:39.05:377,39,0	1/1:1,17:18:54.09:521,54,0	1/1:1,28:29:78.10:753,78,0	1/1:0,27:27:72.08:695,72,0	1/1:1,24:25:72.11:695,72,0	1/1:5,29:34:84.13:811,84,0	1/1:3,18:21:54.06:511,54,0	1/1:0,16:16:42.07:406,42,0	1/1:3,19:22:48.07:464,48,0	1/1:0,13:13:33.05:318,33,0	1/1:1,14:15:39.06:376,39,0	1/1:2,19:21:54.08:522,54,0	1/1:2,15:17:45.07:434,45,0	1/1:3,20:23:63.08:600,63,0	1/1:4,29:33:78.12:753,78,0	1/1:1,9:10:27.04:261,27,0
chr10	11066338	.	TGGG	T	7998.79	PASS	AB=0.667;AC=39;AF=0.722;AN=54;BaseQRankSum=-4.135;DP=435;FS=6.042;HRun=12;HaplotypeScore=73.4105;InbreedingCoeff=0.7913;MQ=65.39;MQ0=0;MQRankSum=-1.971;QD=23.05;ReadPosRankSum=6.614;VQSLOD=3.2887;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:7.83:0,8,60	1/1:2,5:7:11.98:135,12,0	0/0:6,0:8:12.61:0,13,191	0/0:7,0:5:9.03:0,9,118	0/0:5,0:13:9.97:0,10,23	./.	0/0:21,0:21:30.06:0,30,357	1/1:3,14:17:39.07:492,39,0	0/0:9,0:9:12.03:0,12,148	1/1:5,17:22:57.15:700,57,0	1/1:1,9:10:9:113,9,0	1/1:1,14:16:42.06:510,42,0	1/1:3,13:16:18.04:226,18,0	1/1:4,7:11:15.05:188,15,0	1/1:6,16:22:42.12:530,42,0	1/1:1,16:17:48.14:598,48,0	1/1:6,25:31:63.17:795,63,0	1/1:8,13:21:35.94:454,36,0	1/1:4,8:12:24.05:299,24,0	0/1:7,7:14:9.48:138,0,9	1/1:9,24:33:53.80:681,54,0	1/1:5,12:17:4.83:315,5,0	1/1:3,11:14:24.07:303,24,0	1/1:7,17:24:45.12:568,45,0	0/0:4,1:5:1.25:0,1,3	1/1:10,10:20:36.06:430,36,0	1/1:4,8:12:21.06:263,21,0	1/1:4,7:11:18.69:261,19,0
chr10	11066348	.	GGGA	G	2966.26	PASS	AB=0.983;AC=26;AF=0.464;AN=56;BaseQRankSum=9.372;DP=422;FS=5.922;HRun=0;HaplotypeScore=90.4688;InbreedingCoeff=-0.0519;MQ=70.03;MQ0=0;MQRankSum=-3.656;QD=8.75;ReadPosRankSum=13.575;VQSLOD=-0.6645;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:9.47:0,9,101	0/1:6,0:6:2.20:44,0,2	0/0:12,0:11:4.99:0,5,261	0/0:9,0:7:17.88:0,18,195	0/0:12,0:12:14.39:0,14,69	0/0:2,0:2:2.18:0,2,23	0/0:20,0:20:48.07:0,48,673	0/1:28,0:28:99:160,0,239	0/0:11,0:11:17.02:0,17,262	1/1:18,2:20:24.51:297,25,0	0/1:12,0:12:33.12:33,0,44	0/1:22,0:22:99:186,0,112	0/1:15,0:15:23.63:73,0,24	1/1:7,0:7:14.78:100,15,0	1/1:19,1:20:6.97:197,7,0	1/1:17,0:17:36.61:282,37,0	0/1:30,1:31:34.31:333,0,34	0/1:17,2:19:62.63:193,0,63	0/1:13,0:13:71.06:103,0,71	0/1:12,0:12:41.69:42,0,62	0/1:34,0:34:99:206,0,143	0/1:16,0:16:53.91:114,0,54	1/1:11,0:11:23.22:151,23,0	0/1:20,0:20:20.15:218,0,20	0/0:7,0:7:17.30:0,17,116	0/1:15,2:17:30.87:218,0,31	0/1:11,0:11:22.57:106,0,23	1/1:8,0:8:10.24:89,10,0
chr10	11069360	.	GC	G	5503.03	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=16.896;DP=697;FS=23.669;HRun=4;HaplotypeScore=96.8509;InbreedingCoeff=0.9989;MQ=80.90;MQ0=0;MQRankSum=-2.485;QD=33.76;ReadPosRankSum=3.407;VQSLOD=2.9991;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,132,1788	0/0:8,0:8:24.07:0,24,309	0/0:25,0:24:34.36:0,34,699	0/0:18,0:18:47.74:0,48,614	1/1:1,22:23:66.16:774,66,0	0/0:23,0:23:63.21:0,63,882	0/0:34,0:34:96.32:0,96,1342	0/0:26,0:26:75.24:0,75,1013	0/0:24,0:24:72.24:0,72,1001	0/0:25,0:25:69.22:0,69,937	0/0:15,0:15:42.13:0,42,571	1/1:1,39:40:99:1242,105,0	1/1:1,31:32:93.28:1114,93,0	1/1:1,24:25:72.22:863,72,0	0/0:27,0:27:78.26:0,78,1089	0/0:28,0:28:81.26:0,81,1114	0/0:28,0:28:81.26:0,81,1113	0/0:33,0:33:96.31:0,96,1327	0/0:14,0:14:39.12:0,39,523	0/0:8,0:8:24.08:0,24,332	0/0:47,0:47:99:0,138,1890	1/1:1,20:21:60.18:719,60,0	0/0:18,0:18:51.16:0,51,691	0/0:23,0:23:69.20:0,69,930	1/1:0,22:22:66.20:791,66,0	0/0:25,0:25:66.21:0,66,904	0/0:28,0:28:78.23:0,78,1052	0/0:11,0:11:27.09:0,27,371
chr10	11071044	.	AG	A	6560.69	PASS	AB=0.675;AC=42;AF=0.750;AN=56;BaseQRankSum=6.836;DP=493;FS=14.157;HRun=9;HaplotypeScore=63.0831;InbreedingCoeff=0.8119;MQ=75.37;MQ0=4;MQRankSum=-0.739;QD=18.07;ReadPosRankSum=5.246;VQSLOD=3.8117;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:63.08:0,63,679	0/1:3,2:5:3.93:67,0,4	0/0:31,1:14:19.73:0,20,130	0/0:24,0:15:14.23:0,14,112	1/1:9,17:26:60.53:525,61,0	0/0:17,0:17:51.10:0,51,547	0/0:12,0:12:24.03:0,24,247	1/1:3,16:20:44.95:385,45,0	0/0:14,0:14:39.08:0,39,425	1/1:1,14:15:42:372,42,0	1/1:5,9:13:35.93:313,36,0	1/1:8,7:15:7.36:215,7,0	1/1:2,15:17:38.92:344,39,0	1/1:5,6:10:15.01:137,15,0	1/1:0,12:12:21.01:192,21,0	1/1:6,15:21:35.85:309,36,0	1/1:5,23:28:51.02:465,51,0	1/1:4,19:23:53.99:485,54,0	1/1:3,10:13:15.04:221,15,0	1/1:3,11:14:11.08:201,11,0	0/1:3,4:7:8.74:83,0,9	1/1:2,15:17:31.31:328,31,0	1/1:8,11:19:29.83:252,30,0	1/1:3,13:16:39.01:356,39,0	1/1:1,18:19:26.96:238,27,0	1/1:3,21:24:65.93:583,66,0	1/1:3,15:18:36:323,36,0	1/1:2,7:9:18:164,18,0
chr10	11071125	.	G	GA	2456.25	PASS	AB=0.626;AC=30;AF=0.556;AN=54;BaseQRankSum=5.033;DP=368;FS=11.197;HRun=0;HaplotypeScore=79.9173;InbreedingCoeff=0.7184;MQ=42.97;MQ0=25;MQRankSum=-4.873;QD=11.64;ReadPosRankSum=3.336;VQSLOD=4.0175;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:30:75.19:0,75,991	1/1:4,2:6:9.02:92,9,0	./.	0/0:8,0:2:2.50:0,2,9	0/0:2,0:13:19.48:0,19,59	0/0:16,0:15:37.90:0,38,470	0/0:14,0:13:30.10:0,30,418	0/0:17,0:16:42.12:0,42,556	0/0:11,0:11:17.96:0,18,249	1/1:7,13:20:17.56:371,18,0	1/1:4,9:13:17.82:192,18,0	1/1:8,1:16:27.44:142,27,0	1/1:3,1:8:16.62:97,17,0	1/1:1,0:10:18.97:83,19,0	1/1:3,4:7:12.91:126,13,0	0/1:7,8:16:19.35:229,0,19	1/1:6,13:17:27.86:299,28,0	1/1:12,7:16:13.84:139,14,0	0/0:10,0:9:26.57:0,27,336	0/0:17,0:16:36.06:0,36,501	0/0:4,0:3:0.47:0,0,1	1/1:8,0:12:13.43:78,13,0	1/1:4,5:9:4.63:82,5,0	1/1:6,2:7:0.08:13,0,0	0/0:4,0:9:13.57:0,14,36	1/1:5,9:15:29.67:309,30,0	0/1:7,12:19:7.65:304,0,8	1/1:7,1:5:8.99:98,9,0
chr10	11071138	.	AC	A	811.21	PASS	AB=0.967;AC=9;AF=0.161;AN=56;BaseQRankSum=3.538;DP=485;FS=95.287;HRun=2;HaplotypeScore=93.4690;InbreedingCoeff=0.3466;MQ=41.50;MQ0=27;MQRankSum=-0.019;QD=8.36;ReadPosRankSum=-2.906;VQSLOD=-0.5265;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:32:69.29:0,69,862	0/1:8,0:8:5.18:5,0,37	0/1:8,1:4:19.49:53,0,19	0/1:10,0:3:1.20:1,0,3	1/1:19,8:26:68.08:566,68,0	0/0:20,0:19:25.88:0,26,435	0/1:17,0:16:9.94:10,0,159	0/0:24,0:24:31.43:0,31,492	0/0:13,0:13:35.15:0,35,313	0/0:26,0:26:37.17:0,37,276	0/0:16,0:15:20.35:0,20,157	0/0:16,0:15:40.75:0,41,398	0/0:15,0:15:25.27:0,25,229	0/0:14,0:14:27.88:0,28,226	0/0:12,0:12:13.03:0,13,109	0/0:20,0:20:23.70:0,24,144	0/0:29,0:25:18.97:0,19,263	0/0:19,0:16:6.08:0,6,78	0/0:12,0:13:19.11:0,19,277	0/0:17,0:16:28.82:0,29,380	0/1:6,0:5:14.65:15,0,21	0/0:14,0:13:28.19:0,28,245	0/0:14,0:14:11.78:0,12,145	0/0:11,0:10:9.25:0,9,36	1/1:13,4:17:29.08:302,29,0	0/0:18,0:17:40.01:0,40,240	0/0:30,0:29:4.83:0,5,259	0/0:10,0:7:1.05:0,1,68
chr10	11071139	.	CCA	C	446.04	PASS	AB=0.969;AC=7;AF=0.125;AN=56;BaseQRankSum=5.343;DP=487;FS=53.353;HRun=0;HaplotypeScore=99.8514;InbreedingCoeff=0.1419;MQ=41.95;MQ0=26;MQRankSum=-0.816;QD=4.55;ReadPosRankSum=-1.733;VQSLOD=0.2146;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:37:99:0,99,1255	0/1:7,1:8:23.72:24,0,75	0/1:11,0:4:34.62:64,0,35	0/1:10,0:3:10.94:17,0,11	1/1:25,2:26:56.51:338,57,0	0/0:20,0:19:46.86:0,47,639	0/0:17,0:16:37.71:0,38,338	0/0:23,0:23:45.29:0,45,636	0/0:13,0:13:36.05:0,36,468	0/0:24,0:24:59.46:0,59,523	0/0:15,0:14:22.19:0,22,202	0/0:16,0:16:40.85:0,41,504	0/0:16,0:15:24.93:0,25,338	0/0:13,0:14:29.95:0,30,305	0/0:12,0:12:21.37:0,21,177	0/0:19,0:19:22.76:0,23,224	0/0:28,0:25:7.89:0,8,349	0/1:20,1:17:23.70:24,0,136	0/0:12,0:12:15.21:0,15,317	0/0:15,0:15:39.08:0,39,445	0/0:7,0:6:3.09:0,3,41	0/0:14,0:13:32:0,32,364	0/0:14,0:14:30.72:0,31,205	0/0:11,0:10:0.82:0,1,61	0/1:21,0:19:45.54:113,0,46	0/0:19,0:18:45.99:0,46,426	0/0:26,2:27:14.42:0,14,425	0/0:9,0:7:16.47:0,16,100
chr10	11071140	.	CA	C	918.02	PASS	AB=0.845;AC=23;AF=0.411;AN=56;BaseQRankSum=2.065;DP=500;FS=4.551;HRun=16;HaplotypeScore=95.1226;InbreedingCoeff=0.3265;MQ=42.16;MQ0=26;MQRankSum=-0.212;QD=3.21;ReadPosRankSum=0.218;VQSLOD=0.5988;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:38:59.19:0,59,490	1/1:4,2:7:10.85:58,11,0	0/1:11,0:4:12.15:12,0,16	0/0:10,0:3:5.48:0,5,25	1/1:28,0:27:29.14:123,29,0	0/0:18,1:19:10.84:0,11,179	0/1:17,1:17:2.26:2,0,122	0/0:18,0:27:59.58:0,60,359	0/0:12,1:14:23.81:0,24,187	0/1:16,7:23:40.23:126,0,40	0/1:9,5:14:8.83:60,0,9	0/0:15,1:16:23.24:0,23,225	0/0:14,0:15:29.15:0,29,172	0/0:12,0:13:17.41:0,17,102	1/1:7,4:12:10.80:72,11,0	1/1:12,6:18:13.19:87,13,0	0/1:23,5:25:13.77:70,0,14	1/1:15,5:17:13.77:96,14,0	0/0:13,0:14:22.46:0,22,140	0/0:16,0:17:32.27:0,32,179	0/0:6,0:7:7.78:0,8,36	0/0:12,0:14:20.42:0,20,128	1/1:7,5:14:15.68:83,16,0	0/1:10,1:11:14.72:15,0,15	0/1:21,0:19:28.13:28,0,95	0/1:12,6:18:19.02:115,0,19	0/1:20,9:28:13.99:113,0,14	1/1:6,1:7:10.09:49,10,0
chr10	11071891	.	C	CA	5074.60	PASS	AB=0.860;AC=44;AF=0.786;AN=56;BaseQRankSum=5.225;DP=614;FS=2.284;HRun=13;HaplotypeScore=98.1877;InbreedingCoeff=0.3707;MQ=64.77;MQ0=1;MQRankSum=-0.511;QD=9.05;ReadPosRankSum=3.355;VQSLOD=4.4576;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:11,19:31:2.76:514,0,3	1/1:8,0:8:14.27:71,14,0	0/1:21,1:11:11.21:25,0,11	0/1:18,0:11:15.28:15,0,22	1/1:43,0:43:98.86:417,99,0	1/1:5,15:21:35.88:321,36,0	0/1:6,5:11:17.14:127,0,17	0/0:20,0:22:12.62:0,13,184	1/1:3,10:13:18.02:167,18,0	1/1:24,0:24:31.36:193,31,0	1/1:21,0:21:45.72:235,46,0	1/1:16,0:17:35.37:156,35,0	1/1:17,0:17:16.27:71,16,0	1/1:13,0:13:1.50:61,1,0	1/1:28,0:28:47.84:245,48,0	1/1:22,0:22:50.24:252,50,0	1/1:25,0:25:51.94:282,52,0	1/1:24,0:24:41.61:296,42,0	0/1:18,2:19:17.19:17,0,196	0/0:17,0:18:37.69:0,38,252	0/0:13,0:13:23.75:0,24,164	1/1:19,0:19:23.40:125,23,0	1/1:23,0:23:20.50:167,20,0	1/1:34,0:34:47.36:320,47,0	1/1:22,0:22:43.93:180,44,0	1/1:28,0:28:56.34:262,56,0	0/1:31,0:31:6.60:274,0,7	1/1:26,0:26:40.16:282,40,0
chr10	11071892	.	A	AAC	5850.90	PASS	AB=0.577;AC=35;AF=0.625;AN=56;BaseQRankSum=2.472;DP=606;FS=1.165;HRun=0;HaplotypeScore=105.8876;InbreedingCoeff=0.8534;MQ=64.87;MQ0=1;MQRankSum=-0.600;QD=13.93;ReadPosRankSum=5.871;VQSLOD=4.7753;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:64.90:0,65,477	1/1:7,0:7:14.57:82,15,0	0/0:22,0:11:1.66:0,2,85	0/0:15,0:8:1.43:0,1,88	1/1:43,0:43:99:532,113,0	0/0:20,0:20:31.66:0,32,232	0/0:11,0:11:18.16:0,18,173	0/0:24,0:24:51.01:0,51,653	0/0:12,0:12:22.45:0,22,134	1/1:23,1:24:60.49:371,60,0	1/1:20,0:20:44.89:259,45,0	1/1:4,14:18:41.90:572,42,0	1/1:4,12:17:17.90:259,18,0	0/1:4,9:15:26.67:305,0,27	1/1:27,0:27:48.45:254,48,0	1/1:22,0:22:51.34:270,51,0	1/1:23,0:23:52.11:277,52,0	1/1:24,0:24:62.29:356,62,0	0/0:20,0:19:44.13:0,44,576	0/0:18,0:18:54.09:0,54,666	0/0:13,0:13:36.05:0,36,413	1/1:3,15:18:47.87:589,48,0	1/1:21,1:22:43.05:280,43,0	1/1:34,0:34:54.80:322,55,0	1/1:22,0:22:46.98:212,47,0	1/1:28,0:28:70.41:345,70,0	1/1:30,0:30:38.51:261,39,0	1/1:26,0:26:53.99:305,54,0
chr10	11071893	.	A	AC	10977.75	PASS	AB=0.969;AC=36;AF=0.643;AN=56;BaseQRankSum=-5.938;DP=614;FS=0.838;HRun=0;HaplotypeScore=76.2861;InbreedingCoeff=0.5960;MQ=65.54;MQ0=1;MQRankSum=-1.478;QD=23.61;ReadPosRankSum=8.929;VQSLOD=5.8416;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:9.67:0,10,254	1/1:1,7:8:15.03:194,15,0	0/1:20,0:9:17.84:18,0,88	0/1:15,0:7:8.96:9,0,120	1/1:0,43:43:99:1378,123,0	0/0:20,0:20:6.38:0,6,102	0/0:10,0:10:6.36:0,6,137	0/0:24,0:24:65.96:0,66,706	0/0:12,0:12:3.35:0,3,48	1/1:6,19:25:67.61:787,68,0	1/1:0,19:20:54.36:633,54,0	1/1:15,2:17:33.37:270,33,0	0/1:15,1:16:26.74:106,0,27	0/1:13,1:14:39.52:104,0,40	1/1:2,26:28:51.13:649,51,0	1/1:3,21:24:54.03:688,54,0	1/1:0,22:22:54.18:695,54,0	1/1:4,20:24:64.79:807,65,0	0/0:19,0:18:44.63:0,45,564	0/0:19,0:19:54.11:0,54,647	0/0:12,0:12:36.06:0,36,422	1/1:17,1:18:0.19:175,0,0	1/1:4,18:22:34.21:503,34,0	1/1:5,31:36:67.39:866,67,0	1/1:0,23:23:51.15:603,51,0	1/1:4,27:31:84.11:950,84,0	1/1:7,26:33:61.14:769,61,0	1/1:1,25:26:60.12:775,60,0
chr10	11072945	.	GGTA	G	189.68	PASS	AB=0.841;AC=11;AF=0.212;AN=52;BaseQRankSum=2.629;DP=174;FS=17.154;HRun=0;HaplotypeScore=36.6004;InbreedingCoeff=0.0168;MQ=99.94;MQ0=0;MQRankSum=-2.137;QD=6.12;ReadPosRankSum=-2.748;VQSLOD=-0.6701;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:72.23:0,72,1401	./.	0/0:15,0:14:15.24:0,15,389	0/0:11,0:11:24.04:0,24,411	0/0:2,0:2:3.01:0,3,37	0/0:13,0:13:39.13:0,39,792	0/0:9,0:9:27.08:0,27,521	0/0:7,0:7:21.07:0,21,428	0/0:5,0:5:15.05:0,15,302	0/1:4,0:4:45.54:56,0,46	0/0:1,0:1:3.01:0,3,43	0/1:5,0:5:22.69:23,0,46	1/1:1,0:1:3.01:46,3,0	0/0:6,0:6:6:0,6,76	0/0:5,0:5:14.94:0,15,186	0/1:2,1:3:9.92:10,0,81	0/1:3,4:7:41.96:42,0,86	0/1:4,0:4:3.42:3,0,34	0/0:10,0:10:27.09:0,27,553	0/0:4,0:4:12.04:0,12,248	0/0:16,0:16:42.11:0,42,816	1/1:1,0:1:3.01:45,3,0	0/0:1,0:1:3.01:0,3,46	0/0:5,2:7:15.52:0,16,283	0/0:5,0:5:8.39:0,8,100	0/1:2,1:3:37.24:57,0,37	0/1:2,1:3:42.22:42,0,82	./.
chr10	11072946	.	GTA	G	132.40	PASS	AB=0.887;AC=10;AF=0.192;AN=52;BaseQRankSum=2.595;DP=168;FS=20.083;HRun=0;HaplotypeScore=32.7427;InbreedingCoeff=0.0445;MQ=99.45;MQ0=0;MQRankSum=-2.357;QD=5.09;ReadPosRankSum=-3.435;VQSLOD=-0.0994;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:72.25:0,72,1227	./.	0/0:14,0:13:28.99:0,29,348	0/0:11,0:11:23.12:0,23,363	0/0:2,0:2:2.99:0,3,24	0/0:14,0:14:42.14:0,42,738	0/0:9,0:9:27.08:0,27,443	0/0:7,0:7:21.07:0,21,374	0/0:5,0:5:15.05:0,15,266	0/1:1,3:4:44.07:56,0,44	0/0:1,0:1:3.01:0,3,30	0/1:5,0:5:22.16:22,0,44	1/1:1,0:1:3.01:46,3,0	0/0:5,0:5:5.69:0,6,55	0/0:6,0:6:17.90:0,18,207	0/1:3,0:3:9.79:10,0,68	0/1:6,0:6:23.20:23,0,74	0/0:3,0:3:5.85:0,6,45	0/0:9,0:9:27.09:0,27,473	0/0:4,0:4:12.04:0,12,208	0/0:15,0:15:42.11:0,42,704	1/1:1,0:1:3.01:45,3,0	0/0:1,0:1:3.01:0,3,33	0/0:7,0:7:15.52:0,16,246	0/0:5,0:5:8.95:0,9,95	0/1:2,1:3:37.06:39,0,37	0/1:3,0:3:24.49:24,0,61	./.
chr10	11073283	.	CG	C	3583.05	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=10.563;DP=705;FS=0.887;HRun=1;HaplotypeScore=64.3201;InbreedingCoeff=0.9988;MQ=91.54;MQ0=1;MQRankSum=-1.796;QD=40.26;ReadPosRankSum=-2.313;VQSLOD=3.3321;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,102,1592	0/0:8,0:8:21.07:0,21,331	0/0:31,0:31:87.24:0,87,1309	0/0:28,0:28:78.12:0,78,1123	0/0:22,0:22:63.21:0,63,1003	0/0:24,0:24:72.25:0,72,1148	0/0:34,0:34:99:0,102,1595	1/1:0,34:34:99:1407,102,0	0/0:24,0:24:72.15:0,72,1052	0/0:23,0:23:69.23:0,69,1076	0/0:14,0:14:42.14:0,42,653	0/0:24,0:24:69.19:0,69,1067	0/0:32,0:32:90.20:0,90,1377	0/0:32,0:32:93.24:0,93,1378	0/0:45,0:45:99:0,135,2059	0/0:37,0:37:99:0,111,1674	0/0:36,0:36:99:0,108,1693	0/0:28,0:28:80.28:0,80,1215	1/1:0,14:14:42.14:587,42,0	1/1:0,13:13:39.13:541,39,0	1/1:0,28:28:75.25:1048,75,0	0/0:14,0:14:41.94:0,42,604	0/0:17,0:17:51.17:0,51,813	0/0:25,0:24:72.25:0,72,1148	0/0:20,0:20:60.19:0,60,917	0/0:27,0:27:75.16:0,75,1112	0/0:24,0:24:72.25:0,72,1137	0/0:13,0:13:39.13:0,39,621
chr10	11074644	.	TG	T	5154.35	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=12.001;DP=716;FS=36.170;HRun=1;HaplotypeScore=69.2539;InbreedingCoeff=0.9993;MQ=70.75;MQ0=0;MQRankSum=-0.068;QD=35.30;ReadPosRankSum=1.264;VQSLOD=2.5487;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,144,2198	0/0:9,0:9:27.08:0,27,408	0/0:15,0:14:38.53:0,39,524	0/0:26,0:26:78.11:0,78,1116	1/1:0,15:15:39.05:496,39,0	0/0:25,0:25:75.26:0,75,1191	0/0:34,0:34:99:0,102,1529	0/0:11,0:11:33.11:0,33,527	0/0:23,0:23:69.19:0,69,1032	0/0:22,0:21:63.17:0,63,957	0/0:20,0:20:54.17:0,54,837	1/1:0,37:37:99:1385,99,0	1/1:0,25:25:69.23:965,69,0	1/1:2,28:30:90.29:1229,90,0	0/0:33,0:33:99:0,99,1578	0/0:39,0:39:99:0,114,1817	0/0:43,0:43:99:0,126,1960	0/0:35,0:35:99:0,105,1678	0/0:15,0:15:42.13:0,42,619	0/0:16,0:16:48.16:0,48,764	0/0:53,0:53:99:0,157,2436	1/1:0,17:17:39.08:507,39,0	0/0:16,0:16:48.16:0,48,764	0/0:30,0:29:90.22:0,90,1375	1/1:0,22:22:42.13:572,42,0	0/0:26,0:26:78.27:0,78,1241	0/0:22,0:22:66.20:0,66,1024	0/0:8,0:8:24.08:0,24,377
chr10	11074824	.	TG	T	15492.35	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=20.037;DP=762;FS=6.479;HRun=2;HaplotypeScore=130.3580;InbreedingCoeff=0.9998;MQ=83.75;MQ0=0;MQRankSum=-3.908;QD=35.21;ReadPosRankSum=4.450;VQSLOD=4.0131;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:64,0:64:99:0,187,2721	1/1:0,18:18:54.17:697,54,0	0/0:24,0:24:72.18:0,72,1016	0/0:23,0:23:28.22:0,28,822	1/1:0,29:29:78.25:1013,78,0	0/0:27,0:27:81.27:0,81,1211	0/0:31,0:31:93.31:0,93,1388	0/0:29,0:29:81.26:0,81,1176	0/0:26,0:26:75.25:0,75,1123	1/1:1,23:24:57.66:740,58,0	1/1:1,20:21:54.18:701,54,0	1/1:1,30:31:84.27:1091,84,0	1/1:0,23:23:66.21:857,66,0	1/1:1,23:24:66.21:857,66,0	1/1:0,32:32:93.30:1205,93,0	1/1:3,25:28:69.22:896,69,0	1/1:0,32:32:87.28:1129,87,0	1/1:1,30:31:81.24:1052,81,0	0/0:31,0:31:90.25:0,90,1271	0/0:16,0:16:48.16:0,48,719	0/0:51,0:51:99:0,147,2200	1/1:0,29:29:72.23:932,72,0	1/1:0,21:21:60.20:779,60,0	1/1:1,27:28:75.24:974,75,0	1/1:0,18:18:54.18:701,54,0	1/1:0,19:19:57.18:739,57,0	1/1:0,22:22:57.19:740,57,0	1/1:0,10:10:30.10:390,30,0
chr10	11075939	.	T	TC	17110.27	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-7.100;DP=675;FS=1.206;HRun=3;HaplotypeScore=73.9845;InbreedingCoeff=0.9842;MQ=88.31;MQ0=0;MQRankSum=-4.929;QD=31.45;ReadPosRankSum=4.387;VQSLOD=5.0228;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:75.21:0,75,886	1/1:0,8:8:15.05:210,15,0	0/0:17,0:17:48.14:0,48,567	0/0:30,0:30:68.11:0,68,791	1/1:0,26:26:69.23:964,69,0	0/0:11,0:11:33.08:0,33,382	0/0:34,0:34:99:0,99,1187	1/1:47,0:47:65.89:583,66,0	0/0:13,0:13:39.12:0,39,468	1/1:0,36:36:99:1453,105,0	1/1:1,15:16:36.12:504,36,0	1/1:2,27:29:75.25:1043,75,0	1/1:1,24:25:69.23:966,69,0	1/1:1,16:17:48.16:672,48,0	1/1:1,24:24:66.22:923,66,0	1/1:3,31:34:51.29:1141,51,0	1/1:1,26:26:72.24:1008,72,0	1/1:1,31:32:78.22:1065,78,0	1/1:13,0:13:8.77:166,9,0	1/1:25,0:25:61.86:383,62,0	1/1:40,0:40:99:700,109,0	1/1:0,22:22:57.19:797,57,0	1/1:2,13:15:39.03:541,39,0	1/1:2,24:26:69.23:966,69,0	1/1:2,24:26:72.24:1007,72,0	1/1:1,24:25:69.23:967,69,0	1/1:1,18:19:48.16:672,48,0	1/1:1,10:11:27.09:378,27,0
chr10	11075942	.	C	CT	10704.63	PASS	AB=1.000;AC=43;AF=0.768;AN=56;BaseQRankSum=6.291;DP=673;FS=3.164;HRun=1;HaplotypeScore=96.2271;InbreedingCoeff=0.9298;MQ=87.76;MQ0=0;MQRankSum=-5.048;QD=19.64;ReadPosRankSum=5.103;VQSLOD=5.3031;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:72.23:0,72,932	1/1:8,0:8:14.55:82,15,0	0/0:18,0:18:51.12:0,51,630	0/0:27,0:27:62.28:0,62,789	1/1:27,0:27:46.63:389,47,0	0/0:12,0:12:30.05:0,30,369	0/0:33,0:33:99:0,99,1255	1/1:2,45:47:99:1892,132,0	0/0:13,0:13:39.13:0,39,506	1/1:35,0:35:95.47:470,95,0	1/1:14,0:14:35.03:202,35,0	1/1:30,0:30:29.34:389,29,0	1/1:26,0:26:22.40:329,22,0	1/1:17,0:17:46.55:262,47,0	0/1:29,0:28:2.42:286,0,2	1/1:32,0:32:45.43:416,45,0	1/1:26,0:25:69.97:405,70,0	1/1:32,0:32:52.49:379,52,0	1/1:3,13:16:42.09:584,42,0	1/1:2,24:26:69.14:983,69,0	1/1:0,40:40:99:1663,111,0	1/1:22,0:22:33.76:313,34,0	1/1:14,0:14:37.93:219,38,0	1/1:26,0:26:24.30:330,24,0	1/1:24,0:24:69.87:397,70,0	1/1:25,0:25:42.11:311,42,0	1/1:19,0:19:24.06:253,24,0	1/1:10,0:10:26.25:150,26,0
chr10	11076986	.	TA	T	7071.12	PASS	AB=0.717;AC=35;AF=0.625;AN=56;BaseQRankSum=12.325;DP=656;FS=11.800;HRun=12;HaplotypeScore=68.2147;InbreedingCoeff=0.8107;MQ=66.28;MQ0=1;MQRankSum=0.019;QD=16.41;ReadPosRankSum=4.136;VQSLOD=5.2297;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,1:34:72.71:0,73,872	0/1:2,3:5:4.84:58,0,5	0/0:16,0:11:17.81:0,18,141	0/1:14,1:10:17.32:17,0,42	1/1:3,20:23:53.49:390,53,0	0/0:26,0:26:56.90:0,57,555	0/0:26,0:28:68.76:0,69,647	0/0:37,0:37:92.51:0,93,895	0/0:22,0:22:60.01:0,60,578	1/1:5,20:25:58.95:441,59,0	1/1:4,21:25:65.71:506,66,0	1/1:5,27:33:76.67:580,77,0	1/1:0,14:14:38.85:302,39,0	1/1:1,19:21:52.65:391,53,0	1/1:4,27:31:74.56:567,75,0	1/1:7,29:36:62.75:488,63,0	1/1:3,35:38:89.53:688,90,0	1/1:3,14:17:35.85:279,36,0	0/0:17,0:17:51.01:0,51,487	0/0:22,0:23:57.39:0,57,546	0/0:21,0:21:57.07:0,57,563	1/1:3,17:20:47.76:367,48,0	1/1:3,17:20:44.82:348,45,0	1/1:6,8:14:11.95:93,12,0	1/1:6,15:21:32.86:255,33,0	1/1:8,29:37:86.53:661,87,0	1/1:3,22:26:64.72:488,65,0	0/1:3,7:10:2.62:153,0,3
chr10	11077112	.	AAGAGCAGTC	A	16683.31	PASS	AB=0.633;AC=35;AF=0.625;AN=56;BaseQRankSum=8.432;DP=622;FS=0.343;HRun=0;HaplotypeScore=201.6421;InbreedingCoeff=0.8948;MQ=54.80;MQ0=20;MQRankSum=-15.577;QD=54.70;ReadPosRankSum=2.461;VQSLOD=4.7188;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,99,4737	1/1:1,7:8:21.07:618,21,0	0/0:27,0:12:31.91:0,32,1046	0/0:31,0:12:36.09:0,36,1219	1/1:3,17:20:47.99:995,48,0	0/0:26,0:26:72.25:0,72,3286	0/0:35,0:35:90.30:0,90,4094	0/0:39,0:38:87.30:0,87,3372	0/0:24,0:24:66.23:0,66,3161	1/1:2,10:12:27.09:811,27,0	1/1:2,10:12:21.07:496,21,0	1/1:3,16:19:45.15:1351,45,0	1/1:3,12:15:36.12:1079,36,0	1/1:1,17:18:48.16:1441,48,0	1/1:8,22:30:42.14:1261,42,0	1/1:4,24:27:53.72:1621,54,0	1/1:1,21:22:42.14:1186,42,0	0/1:8,11:19:45.84:433,0,46	0/0:24,0:19:54.17:0,54,1987	0/0:18,0:18:51.18:0,51,1983	0/0:56,0:54:99:0,160,6181	1/1:5,19:24:51.13:1311,51,0	1/1:5,6:11:18.06:521,18,0	1/1:4,11:15:30:806,30,0	1/1:1,10:11:18.06:522,18,0	1/1:2,17:19:51.18:1510,51,0	1/1:6,10:16:21.54:631,22,0	1/1:3,3:6:3.01:90,3,0
chr10	11080584	.	CTT	C	8153.30	PASS	AB=0.709;AC=46;AF=0.821;AN=56;BaseQRankSum=-6.718;DP=637;FS=7.553;HRun=14;HaplotypeScore=85.5459;InbreedingCoeff=0.7489;MQ=68.56;MQ0=5;MQRankSum=1.027;QD=14.91;ReadPosRankSum=2.753;VQSLOD=3.8982;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:10,1:28:8.07:0,8,177	1/1:3,9:12:14.89:139,15,0	0/1:11,0:9:25.96:26,0,39	0/0:11,0:7:6.75:0,7,21	1/1:14,15:30:17.99:321,18,0	0/0:7,0:31:44.95:0,45,167	0/1:3,1:15:1.80:2,0,69	1/1:9,29:40:77.31:695,77,0	0/0:6,0:18:29.89:0,30,166	1/1:8,23:32:53.69:537,54,0	1/1:1,16:18:26.76:295,27,0	1/1:5,22:27:54:500,54,0	1/1:5,17:22:32.76:305,33,0	1/1:7,13:21:20.68:178,21,0	1/1:3,20:23:51.03:472,51,0	1/1:4,30:36:61.67:550,62,0	1/1:8,25:33:44.96:416,45,0	1/1:3,13:15:30.01:278,30,0	1/1:4,14:19:32.81:347,33,0	1/1:2,21:24:50.55:444,51,0	1/1:5,10:15:17.98:167,18,0	1/1:1,19:19:44.95:413,45,0	1/1:7,12:20:19.94:184,20,0	1/1:1,27:28:54.05:500,54,0	1/1:2,14:17:32.75:289,33,0	1/1:8,25:33:71.45:684,71,0	1/1:10,15:26:38.39:329,38,0	1/1:1,4:5:9.01:83,9,0
chr10	11083933	.	ATGTG	A	1410.84	PASS	AB=0.924;AC=24;AF=0.632;AN=38;BaseQRankSum=4.290;DP=587;FS=0.979;HRun=0;HaplotypeScore=115.5386;InbreedingCoeff=0.5218;MQ=64.16;MQ0=17;MQRankSum=-0.335;QD=4.95;ReadPosRankSum=0.578;VQSLOD=2.4606;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:24,4:28:3.01:46,3,0	./.	./.	./.	0/0:18,0:17:2.98:0,3,64	./.	0/1:24,0:26:35.97:42,0,36	./.	1/1:14,0:21:5.83:55,6,0	./.	1/1:8,5:13:6.02:92,6,0	0/0:18,0:18:8.96:0,9,183	0/0:22,0:25:17.72:0,18,323	0/0:23,0:22:9.03:0,9,210	1/1:19,10:30:15.04:210,15,0	1/1:21,9:31:18.05:240,18,0	0/1:17,0:18:12.98:83,0,13	1/1:19,4:22:9.03:138,9,0	./.	1/1:10,0:19:18.02:168,18,0	./.	0/0:15,0:15:9.03:0,9,166	1/1:14,0:14:3:25,3,0	1/1:20,10:29:15.05:230,15,0	0/0:24,0:23:15.04:0,15,264	./.	1/1:17,4:19:12.51:184,13,0	1/1:5,3:8:3.01:46,3,0
chr10	11084072	.	T	TTTTGTTTG	9502.29	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=0.464;DP=756;FS=4.582;HRun=0;HaplotypeScore=173.8339;InbreedingCoeff=0.9467;MQ=60.84;MQ0=0;MQRankSum=-9.556;QD=34.81;ReadPosRankSum=-4.230;VQSLOD=3.7985;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:63.05:0,63,1206	0/0:11,0:11:24.08:0,24,572	0/0:24,0:18:5.98:0,6,78	0/0:16,0:9:12:0,12,182	1/1:13,11:30:39:1038,39,0	0/0:24,0:24:36.12:0,36,880	0/0:29,0:29:51.14:0,51,1058	1/1:32,0:32:39.08:949,39,0	0/0:27,0:27:69.22:0,69,1633	0/0:43,0:43:90.30:0,90,2196	0/0:21,0:21:42.13:0,42,1007	1/1:8,0:19:12.04:417,12,0	1/1:5,0:30:33.58:1140,34,0	1/1:13,0:27:15.05:521,15,0	0/0:33,0:33:63.14:0,63,1406	0/0:46,0:46:99:0,102,2406	0/0:27,0:27:47.55:0,48,1081	0/0:19,0:19:36.09:0,36,785	1/1:20,1:22:6.02:180,6,0	1/1:9,19:31:63.16:2217,63,0	1/1:11,0:11:17.02:365,17,0	1/1:15,0:36:36.05:1034,36,0	0/0:26,0:26:51.13:0,51,1145	0/0:38,0:38:84.27:0,84,2000	1/1:14,16:35:42.14:1641,42,0	0/0:40,0:40:63.21:0,63,1490	0/0:22,0:21:39.13:0,39,952	0/0:9,0:9:9.03:0,9,226
chr10	11085427	.	T	TAAA	2289.50	PASS	AB=0.794;AC=32;AF=0.571;AN=56;BaseQRankSum=0.841;DP=605;FS=2.780;HRun=17;HaplotypeScore=135.6588;InbreedingCoeff=0.5980;MQ=68.93;MQ0=5;MQRankSum=-4.755;QD=5.81;ReadPosRankSum=-2.890;VQSLOD=-0.5320;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:28:18.03:0,18,297	1/1:2,4:8:11.98:125,12,0	0/0:38,0:22:10.52:0,11,94	0/1:21,0:9:1.10:1,0,41	1/1:19,1:36:16.90:331,17,0	0/0:20,0:20:11.80:0,12,237	0/0:12,0:14:7.64:0,8,96	0/0:15,0:30:42.30:0,42,270	0/1:18,0:20:5.71:6,0,94	1/1:14,0:23:23.87:197,24,0	1/1:17,0:16:9.42:102,9,0	0/0:15,0:28:0.70:0,1,37	0/1:9,0:16:12.01:17,0,12	0/1:13,0:22:3.01:3,0,48	1/1:12,15:30:25.57:313,26,0	1/1:14,7:25:15.02:210,15,0	1/1:5,4:10:9.03:140,9,0	1/1:2,3:11:12.87:141,13,0	0/0:11,0:18:21.73:0,22,150	0/0:9,0:19:19.60:0,20,120	0/0:10,0:16:16.61:0,17,111	0/1:13,0:17:0.73:1,0,1	1/1:11,4:16:8.74:118,9,0	1/1:10,5:20:13.78:164,14,0	0/1:9,0:23:5.55:39,0,6	1/1:21,7:30:24.86:332,25,0	1/1:22,1:31:20.47:130,20,0	1/1:8,1:15:10.77:115,11,0
chr10	11088692	.	CCT	C	5431.29	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=10.152;DP=826;FS=8.142;HRun=0;HaplotypeScore=106.1342;InbreedingCoeff=0.9930;MQ=83.74;MQ0=0;MQRankSum=-1.756;QD=35.97;ReadPosRankSum=-2.123;VQSLOD=5.6917;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:56:99:0,157,2762	0/0:9,0:9:27.09:0,27,471	0/0:19,0:18:51.16:0,51,857	0/0:33,0:33:93.31:0,93,1574	0/0:18,0:18:51.16:0,51,872	0/0:28,0:28:75.26:0,75,1331	0/0:42,0:42:99:0,111,1961	1/1:4,28:32:84.24:1103,84,0	0/0:25,0:25:72.25:0,72,1261	0/0:23,0:23:69.24:0,69,1202	0/0:13,0:13:36.12:0,36,631	0/0:37,0:37:99:0,108,1886	0/0:32,0:32:84.29:0,84,1483	0/0:35,0:35:99:0,99,1746	0/0:33,0:33:99:0,99,1756	0/0:32,0:32:90.31:0,90,1588	0/0:62,0:61:99:0,175,3029	0/0:37,0:37:99:0,108,1917	1/1:2,19:21:57.19:783,57,0	1/1:3,18:21:54.18:742,54,0	1/1:2,75:77:99:2803,205,0	0/0:15,0:15:45.15:0,45,798	0/0:23,0:23:57.20:0,57,1010	0/0:32,0:32:93.32:0,93,1639	0/0:8,0:8:18.06:0,18,318	0/0:34,0:34:96.32:0,96,1664	0/0:24,0:24:66.23:0,66,1171	0/0:5,0:5:15.05:0,15,247
chr10	11090495	.	CG	C	1873.31	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=7.898;DP=405;FS=2.379;HRun=6;HaplotypeScore=44.0975;InbreedingCoeff=0.9460;MQ=70.47;MQ0=1;MQRankSum=-0.411;QD=22.57;ReadPosRankSum=4.156;VQSLOD=2.7978;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:33.09:0,33,419	0/0:8,0:8:18.02:0,18,204	0/0:5,0:4:9.03:0,9,114	0/0:7,0:6:14.96:0,15,160	1/1:2,12:14:33.08:355,33,0	0/0:13,0:13:39.13:0,39,512	0/0:23,0:23:69.20:0,69,891	0/0:11,0:11:24.08:0,24,315	0/0:14,0:14:36.02:0,36,438	0/0:19,0:19:48.15:0,48,616	0/0:5,0:5:15.05:0,15,192	1/1:4,12:16:36.09:387,36,0	1/1:4,12:16:30.07:322,30,0	1/1:1,14:15:42.11:451,42,0	0/0:11,0:11:33.11:0,33,434	0/0:7,0:7:21.06:0,21,262	0/0:28,0:28:81.22:0,81,1031	0/0:25,0:25:69.22:0,69,908	0/0:16,0:16:48.10:0,48,580	0/0:2,0:2:6.02:0,6,79	0/0:61,0:60:99:0,159,1998	1/1:2,4:6:15.04:160,15,0	0/0:8,0:8:15.05:0,15,193	0/0:13,0:13:39.13:0,39,512	1/1:1,15:16:35.77:385,36,0	0/0:18,0:18:48.15:0,48,616	0/0:13,0:13:36.12:0,36,466	0/0:4,0:4:12.04:0,12,156
chr10	11090950	.	GCACACACA	G	556.50	PASS	AB=0.940;AC=15;AF=0.441;AN=34;BaseQRankSum=2.640;DP=724;FS=1.623;HRun=0;HaplotypeScore=205.4095;InbreedingCoeff=0.0224;MQ=49.68;MQ0=21;MQRankSum=-3.133;QD=2.01;ReadPosRankSum=2.393;VQSLOD=2.9169;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:37,1:39:11.48:17,0,11	./.	./.	./.	./.	0/1:16,0:15:7.61:8,0,36	0/0:31,1:30:6.02:0,6,83	0/0:23,0:22:2.68:0,3,11	0/1:17,3:20:15.39:138,0,15	0/0:35,0:35:0.94:0,1,2	./.	1/1:35,0:35:3.01:56,3,0	0/1:18,0:18:9.71:83,0,10	1/1:29,0:29:11.90:184,12,0	1/1:48,0:46:3.01:38,3,0	1/1:33,0:33:2.90:33,3,0	0/0:18,0:18:0:0,0,0	0/0:16,0:13:0:0,0,0	./.	0/1:19,0:19:43.07:49,0,43	0/0:41,0:36:3:0,3,29	./.	0/0:19,0:19:0:0,0,0	./.	./.	./.	./.	1/1:17,0:16:3.01:56,3,0
chr10	11090973	.	CACACACACACACACACACACACACACACACACACGT	C	6345.22	PASS	AB=0.824;AC=22;AF=0.393;AN=56;BaseQRankSum=5.887;DP=568;FS=10.655;HRun=0;HaplotypeScore=318.6597;InbreedingCoeff=0.3296;MQ=45.93;MQ0=45;MQRankSum=-1.359;QD=23.07;ReadPosRankSum=3.474;VQSLOD=2.0879;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:29:51.16:0,51,3345	1/1:3,0:2:6.02:115,6,0	0/0:16,0:3:6.02:0,6,173	0/0:28,0:4:9.50:0,10,206	0/0:23,0:22:21.03:0,21,1002	0/0:20,0:17:27.56:0,28,1998	0/0:30,0:27:51.65:0,52,3728	0/0:17,0:13:39.13:0,39,1135	0/0:21,0:21:36.12:0,36,2246	1/1:1,22:23:28.96:638,29,0	1/1:0,10:10:3.01:46,3,0	0/1:33,0:30:92.64:93,0,134	0/1:20,0:20:99:220,0,195	0/1:22,0:22:99:360,0,220	1/1:3,31:33:5.37:334,5,0	0/1:4,18:20:18.33:282,0,18	1/1:17,0:14:23.46:967,23,0	0/1:17,0:13:66.41:971,0,66	0/0:9,0:8:21.02:0,21,862	0/0:15,0:15:21.46:0,21,760	0/0:35,0:28:18.53:0,19,817	0/0:30,0:29:15.51:0,16,299	0/1:0,10:10:0.04:0,0,0	0/1:15,0:13:42.28:416,0,42	0/0:15,0:12:27.09:0,27,913	0/1:3,15:17:99:824,0,104	1/1:14,0:13:13.15:793,13,0	1/1:4,12:13:3.01:286,3,0
chr10	11090978	.	AC	A	825.07	PASS	AB=0.862;AC=18;AF=0.333;AN=54;BaseQRankSum=7.039;DP=553;FS=8.197;HRun=1;HaplotypeScore=139.4264;InbreedingCoeff=0.4800;MQ=46.56;MQ0=40;MQRankSum=-3.291;QD=4.44;ReadPosRankSum=4.588;VQSLOD=0.3648;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:30:50.19:0,50,593	1/1:1,2:2:2.22:7,2,0	0/0:11,0:2:3.01:0,3,38	0/0:21,0:5:14.99:0,15,162	0/0:20,0:20:14.92:0,15,190	0/0:21,0:18:28.62:0,29,340	0/0:30,0:27:51.16:0,51,644	0/0:18,0:14:42.13:0,42,523	0/0:20,0:20:26.52:0,27,309	1/1:23,0:22:1.47:32,1,0	./.	0/0:34,0:31:7.09:0,7,65	0/0:21,0:20:13.54:0,14,122	0/0:20,0:20:11.08:0,11,70	1/1:34,0:32:6:63,6,0	0/1:22,0:20:20.24:35,0,20	1/1:8,8:13:23.64:193,24,0	0/1:13,5:14:49.58:219,0,50	0/0:14,0:11:27.15:0,27,285	0/0:15,0:15:20.39:0,20,243	0/0:35,0:28:11.19:0,11,161	0/0:29,0:27:6:0,6,61	0/1:10,0:10:0:0,0,0	1/1:5,8:11:12.46:99,12,0	0/0:16,0:13:30.06:0,30,346	1/1:18,0:17:0.85:166,1,0	0/1:7,7:13:15.50:149,0,16	1/1:15,0:12:2.99:23,3,0
chr10	11090979	.	C	CA	747.92	PASS	AB=0.956;AC=17;AF=0.315;AN=54;BaseQRankSum=6.657;DP=554;FS=6.931;HRun=1;HaplotypeScore=142.7447;InbreedingCoeff=0.4603;MQ=46.89;MQ0=39;MQRankSum=-4.717;QD=4.00;ReadPosRankSum=4.724;VQSLOD=0.5506;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:30:38.93:0,39,468	1/1:3,0:2:2.22:7,2,0	0/0:12,0:3:3.01:0,3,38	0/0:20,0:5:14.99:0,15,155	0/0:20,0:20:14.92:0,15,190	0/0:21,0:18:29.97:0,30,338	0/0:31,0:28:44.97:0,45,572	0/0:17,0:14:36.09:0,36,439	0/0:20,0:20:29.24:0,29,311	1/1:23,0:22:1.80:32,2,0	./.	0/0:34,0:31:5.29:0,5,52	0/0:22,0:21:11.35:0,11,94	0/0:19,0:19:12.15:0,12,86	1/1:34,0:32:5.94:41,6,0	0/1:21,1:20:8.83:17,0,9	1/1:14,2:13:18.12:180,18,0	0/1:17,1:14:47.76:214,0,48	0/0:14,0:11:24.14:0,24,248	0/0:15,0:15:20.80:0,21,233	0/0:36,0:29:11.11:0,11,149	0/0:27,0:25:3.01:0,3,38	0/1:10,0:10:0.19:0,0,0	1/1:12,2:12:12.46:98,12,0	0/0:17,0:14:31.61:0,32,357	0/1:18,0:17:1.03:161,0,1	0/1:12,2:13:18.40:148,0,18	1/1:14,1:12:2.04:6,2,0
chr10	11090980	.	AC	A	1128.94	PASS	AB=0.974;AC=16;AF=0.286;AN=56;BaseQRankSum=7.081;DP=544;FS=12.753;HRun=1;HaplotypeScore=140.3362;InbreedingCoeff=0.3569;MQ=46.91;MQ0=39;MQRankSum=-4.735;QD=5.70;ReadPosRankSum=4.908;VQSLOD=-0.6609;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:27:25.06:0,25,428	1/1:3,0:2:2.92:19,3,0	0/0:9,0:2:6.02:0,6,75	0/0:21,0:5:14.96:0,15,139	0/0:20,0:20:14.92:0,15,190	0/0:22,0:19:28.60:0,29,324	0/0:29,0:26:51.16:0,51,654	0/0:15,0:12:36.09:0,36,439	0/0:20,0:20:26.50:0,26,296	0/1:23,0:22:3.06:33,0,3	0/1:10,0:10:0:0,0,0	0/0:33,0:30:3.01:0,3,38	0/0:21,0:20:9:0,9,84	0/0:18,0:18:6.44:0,6,45	1/1:34,0:32:6.02:71,6,0	0/1:21,1:20:8.81:25,0,9	0/1:17,0:14:3.50:254,0,4	0/1:15,2:14:42.64:313,0,43	0/0:15,0:12:27.94:0,28,318	0/0:14,0:14:20.36:0,20,227	0/0:35,0:28:13.17:0,13,166	0/0:28,0:26:3.01:0,3,38	0/1:10,0:10:0:0,0,0	1/1:14,0:12:14.58:128,15,0	0/0:17,0:14:33.06:0,33,373	0/1:18,0:17:1.92:203,0,2	0/1:14,1:14:43.32:221,0,43	1/1:15,0:12:2.84:14,3,0
chr10	11090981	.	CACACACACACACACACACACACACACGT	C	4706.64	PASS	AB=1.000;AC=33;AF=0.589;AN=56;BaseQRankSum=8.373;DP=539;FS=3.173;HRun=0;HaplotypeScore=256.7868;InbreedingCoeff=0.3611;MQ=47.30;MQ0=40;MQRankSum=-1.083;QD=12.76;ReadPosRankSum=3.321;VQSLOD=3.7695;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:27:42.11:0,42,1901	1/1:3,0:2:6.01:65,6,0	0/0:9,0:3:9.03:0,9,169	0/0:24,0:6:17.65:0,18,278	0/0:21,0:21:15.05:0,15,350	0/0:23,0:20:30.09:0,30,1325	0/0:30,0:27:51.17:0,51,2391	0/0:14,0:11:16.96:0,17,375	0/0:20,0:20:33.11:0,33,1440	1/1:22,0:22:33.62:481,34,0	1/1:10,0:10:3.01:33,3,0	1/1:5,22:24:5.48:247,5,0	1/1:2,14:15:12.44:552,12,0	1/1:0,17:17:10.81:879,11,0	1/1:33,0:32:5.11:202,5,0	0/1:21,0:20:0.40:206,0,0	1/1:15,0:14:30.89:328,31,0	0/1:16,0:14:36.88:297,0,37	0/1:16,0:13:99:137,0,220	0/1:13,0:13:69.76:70,0,272	0/1:37,0:30:27.25:27,0,254	1/1:3,24:25:2.95:53,3,0	1/1:10,0:10:0.17:1,0,0	1/1:14,0:12:18.63:154,19,0	0/1:18,0:15:76.86:77,0,212	0/1:17,0:17:49.80:352,0,50	1/1:15,0:14:23.18:338,23,0	1/1:14,0:12:3.01:209,3,0
chr10	11090987	.	CACACACACACACACACACACGT	C	5152.71	PASS	AB=0.890;AC=40;AF=0.714;AN=56;BaseQRankSum=5.950;DP=528;FS=1.160;HRun=0;HaplotypeScore=215.5988;InbreedingCoeff=0.4566;MQ=48.09;MQ0=39;MQRankSum=-0.504;QD=13.01;ReadPosRankSum=1.972;VQSLOD=3.5348;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:25:39.09:0,39,1273	1/1:5,0:4:12.03:140,12,0	0/0:10,0:5:15.05:0,15,237	0/0:27,0:8:9.06:0,9,261	0/1:4,15:19:37.47:60,0,37	0/0:21,0:18:27.56:0,28,919	0/0:28,0:25:48.16:0,48,1601	1/1:17,0:14:18.76:253,19,0	0/0:20,0:20:33.10:0,33,965	1/1:23,0:22:33.90:440,34,0	1/1:10,0:10:3.01:33,3,0	1/1:26,0:23:5.81:201,6,0	1/1:16,0:15:12.78:375,13,0	1/1:17,0:17:11.40:632,11,0	1/1:34,0:32:5.69:185,6,0	1/1:22,0:20:2.99:167,3,0	0/1:19,0:16:28.12:173,0,28	0/1:19,0:15:55.47:196,0,55	1/1:12,0:9:6.73:178,7,0	1/1:11,0:11:17.51:332,18,0	1/1:29,0:23:5.69:100,6,0	1/1:27,0:25:3.01:30,3,0	1/1:10,0:10:0.17:1,0,0	1/1:19,0:17:19.20:206,19,0	1/1:10,0:10:27.09:538,27,0	1/1:17,0:16:38.22:460,38,0	0/1:16,0:15:19.39:283,0,19	1/1:15,0:12:3.01:167,3,0
chr10	11091007	.	CGT	C	5628.63	PASS	AB=1.000;AC=41;AF=0.759;AN=54;BaseQRankSum=6.592;DP=567;FS=17.247;HRun=0;HaplotypeScore=126.1324;InbreedingCoeff=0.7822;MQ=65.83;MQ0=31;MQRankSum=-2.926;QD=13.66;ReadPosRankSum=3.472;VQSLOD=3.8619;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:22:42.14:0,42,618	1/1:6,2:7:21.06:251,21,0	0/0:25,0:18:41.54:0,42,646	0/0:32,0:14:13.46:0,13,424	./.	0/0:18,0:15:27.06:0,27,386	0/0:23,0:20:48.16:0,48,748	1/1:22,1:21:47.74:633,48,0	0/0:16,0:16:36.04:0,36,467	1/1:22,1:22:36.12:471,36,0	1/1:10,0:10:3.01:33,3,0	1/1:24,1:23:6.01:63,6,0	1/1:14,2:15:12.01:115,12,0	1/1:18,0:18:12.01:113,12,0	1/1:32,1:31:6.02:83,6,0	1/1:18,3:19:6.01:71,6,0	1/1:3,25:26:36.09:395,36,0	1/1:10,11:19:16.74:575,17,0	1/1:4,19:21:54.17:726,54,0	1/1:7,3:10:24.07:301,24,0	1/1:4,26:27:6.01:69,6,0	1/1:25,2:25:3.01:30,3,0	0/1:10,0:10:0:0,0,0	1/1:1,20:21:17.89:209,18,0	1/1:10,4:11:33.11:448,33,0	1/1:16,1:16:39.12:493,39,0	1/1:4,15:18:45.12:521,45,0	1/1:13,1:12:3:29,3,0
chr10	11092250	.	A	AGACT	38464.87	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-12.111;DP=782;FS=0.689;HRun=0;HaplotypeScore=114.7118;InbreedingCoeff=0.9980;MQ=85.73;MQ0=3;MQRankSum=-7.527;QD=63.26;ReadPosRankSum=5.683;VQSLOD=6.7023;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,99,1759	1/1:1,12:14:36.12:942,36,0	0/0:35,0:34:75.18:0,75,1288	0/0:23,0:23:41.54:0,42,841	1/1:4,17:21:39.13:1020,39,0	0/0:20,0:20:57.17:0,57,1005	0/0:34,0:34:99:0,99,1739	1/1:12,14:27:57.18:1432,57,0	0/0:27,0:27:78.27:0,78,1419	1/1:5,24:30:78.24:1971,78,0	1/1:2,11:13:30.10:785,30,0	1/1:5,29:35:93.32:2408,93,0	1/1:4,26:30:81.23:2060,81,0	1/1:6,23:31:66.23:1727,66,0	1/1:2,20:22:60.21:1567,60,0	1/1:2,19:23:54.19:1415,54,0	1/1:3,38:41:99:2670,102,0	1/1:4,23:27:69.24:1807,69,0	1/1:2,7:9:27.05:645,27,0	1/1:4,16:21:54.14:1350,54,0	1/1:7,50:59:99:3358,130,0	1/1:1,27:29:75.26:1955,75,0	1/1:1,23:24:60.21:1570,60,0	1/1:6,30:35:75.26:1941,75,0	1/1:2,19:23:60.21:1563,60,0	1/1:4,40:45:99:3279,129,0	1/1:4,33:39:99:2531,99,0	1/1:0,6:6:18.06:471,18,0
chr10	11093788	.	GTCGC	G	4381.38	PASS	AB=1.000;AC=35;AF=0.625;AN=56;BaseQRankSum=13.382;DP=542;FS=0.000;HRun=0;HaplotypeScore=144.0174;InbreedingCoeff=0.2850;MQ=62.57;MQ0=0;MQRankSum=-10.036;QD=10.85;ReadPosRankSum=2.659;VQSLOD=4.3952;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,111,2351	1/1:3,0:3:3:27,3,0	0/0:15,0:13:14.41:0,14,272	0/0:7,0:6:3.01:0,3,31	0/1:16,0:16:31.72:41,0,32	0/0:21,0:21:48.09:0,48,982	0/0:23,0:23:51.12:0,51,1062	1/1:10,11:21:30.08:425,30,0	0/0:18,0:18:45.15:0,45,874	0/1:27,0:27:31.57:306,0,32	1/1:5,0:5:2.85:27,3,0	0/1:18,0:18:8.95:240,0,9	1/1:15,0:14:18:164,18,0	0/1:19,0:18:76.50:182,0,76	1/1:14,0:14:27.01:247,27,0	1/1:20,0:20:30.02:275,30,0	1/1:21,0:21:18.01:165,18,0	0/1:27,0:27:69.43:129,0,69	1/1:13,7:20:25.86:324,26,0	1/1:14,2:16:15.03:216,15,0	1/1:13,26:39:27.04:415,27,0	0/1:9,0:9:8.73:88,0,9	1/1:10,0:10:15.01:136,15,0	1/1:31,0:31:6.34:223,6,0	1/1:19,0:19:23.79:185,24,0	0/1:30,0:30:28.87:355,0,29	0/1:21,0:21:31.89:211,0,32	0/1:3,0:3:0:0,0,0
chr10	11093802	.	CGCTCGCTCGCTG	C	10303.34	PASS	AB=1.000;AC=30;AF=0.536;AN=56;BaseQRankSum=9.129;DP=535;FS=2.941;HRun=0;HaplotypeScore=205.1644;InbreedingCoeff=0.5467;MQ=58.58;MQ0=0;MQRankSum=-12.480;QD=34.12;ReadPosRankSum=6.602;VQSLOD=4.1987;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:56:99:0,138,6119	1/1:5,0:5:8.95:152,9,0	0/0:16,0:14:15.20:0,15,809	0/0:10,0:9:15.03:0,15,344	0/1:17,0:17:28.17:28,0,30	0/0:21,0:21:57.18:0,57,2660	0/0:27,0:27:75.23:0,75,3133	0/0:13,0:13:30.07:0,30,563	0/0:21,0:21:60.21:0,60,2633	1/1:13,13:26:54.67:1563,55,0	1/1:1,3:4:6.02:166,6,0	0/1:18,0:18:43.31:63,0,43	0/1:16,0:15:46.35:46,0,58	0/1:20,0:19:37.26:43,0,37	1/1:7,9:16:27.09:982,27,0	1/1:9,10:19:33.11:1129,33,0	1/1:16,7:23:21.07:705,21,0	1/1:23,5:28:35.50:906,36,0	0/0:18,0:18:29.80:0,30,401	0/0:14,0:14:27.02:0,27,538	0/0:37,0:37:42.10:0,42,1055	0/1:10,0:10:1.53:43,0,2	1/1:4,5:9:18.06:610,18,0	1/1:17,13:30:30.46:1029,30,0	0/1:15,0:15:27.20:53,0,27	1/1:9,14:23:51.12:1681,51,0	1/1:11,9:20:29.21:1016,29,0	1/1:3,0:3:3.01:89,3,0
chr10	11093806	.	CGCTCGCTG	C	9902.89	PASS	AB=1.000;AC=39;AF=0.696;AN=56;BaseQRankSum=12.089;DP=533;FS=9.577;HRun=0;HaplotypeScore=174.1221;InbreedingCoeff=0.7058;MQ=60.28;MQ0=0;MQRankSum=-10.308;QD=28.46;ReadPosRankSum=2.016;VQSLOD=3.9917;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,147,4236	1/1:7,0:7:14.92:149,15,0	0/0:15,0:13:13.30:0,13,608	0/0:11,0:11:15.02:0,15,218	1/1:9,5:14:18.03:336,18,0	0/0:21,0:21:53.91:0,54,1774	0/0:26,0:26:75.18:0,75,2137	0/1:13,0:13:37.14:37,0,160	0/0:20,0:20:60.17:0,60,1668	1/1:24,0:24:58.29:894,58,0	1/1:6,0:6:11.82:128,12,0	1/1:10,10:20:45.03:929,45,0	1/1:9,6:14:32.93:613,33,0	1/1:15,8:22:42.02:847,42,0	1/1:16,0:16:30.09:563,30,0	1/1:17,0:17:32.90:611,33,0	1/1:24,0:24:32.72:460,33,0	1/1:27,0:27:41.15:554,41,0	0/1:15,0:15:40.36:40,0,126	0/1:13,0:13:19.11:19,0,202	0/0:37,0:37:44.75:0,45,467	1/1:6,5:11:24.01:451,24,0	1/1:10,0:10:18.03:319,18,0	1/1:30,0:30:26.97:539,27,0	1/1:7,9:16:38.98:781,39,0	1/1:23,0:23:54.12:967,54,0	1/1:22,0:22:38.02:627,38,0	1/1:2,0:2:3.01:39,3,0
chr10	11093894	.	CG	C	13670.07	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=7.801;DP=640;FS=3.904;HRun=6;HaplotypeScore=80.4331;InbreedingCoeff=0.9969;MQ=86.94;MQ0=0;MQRankSum=-6.086;QD=27.39;ReadPosRankSum=3.579;VQSLOD=5.5721;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,105,1352	1/1:1,11:12:30.08:322,30,0	0/0:23,0:22:51.21:0,51,661	0/0:25,1:26:50.02:0,50,608	1/1:3,10:13:27.06:290,27,0	0/0:12,0:12:36.11:0,36,460	0/0:23,0:23:63.19:0,63,815	1/1:5,26:31:78.16:822,78,0	0/0:18,0:18:42.12:0,42,537	1/1:4,25:29:66.16:709,66,0	1/1:0,13:13:36.09:387,36,0	1/1:0,37:37:99:1154,108,0	1/1:1,21:22:54.13:580,54,0	1/1:1,22:23:54.13:580,54,0	1/1:1,30:31:81.20:870,81,0	1/1:0,19:19:51.13:548,51,0	1/1:2,32:34:90.22:967,90,0	1/1:4,39:43:99:1192,111,0	1/1:6,11:17:33.08:354,33,0	1/1:0,12:12:27.07:290,27,0	1/1:3,35:38:99:1128,105,0	1/1:1,13:14:36.09:387,36,0	1/1:2,8:10:18.04:193,18,0	1/1:0,22:22:54.14:579,54,0	1/1:0,14:14:39.10:419,39,0	1/1:0,29:29:81.20:869,81,0	1/1:2,27:29:75.19:805,75,0	1/1:0,7:7:21.05:225,21,0
chr10	11094976	.	AAG	A	1766.20	PASS	AB=0.949;AC=19;AF=0.339;AN=56;BaseQRankSum=7.670;DP=541;FS=10.952;HRun=0;HaplotypeScore=107.5530;InbreedingCoeff=0.1701;MQ=65.17;MQ0=1;MQRankSum=5.360;QD=5.81;ReadPosRankSum=6.718;VQSLOD=1.3046;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:94.10:0,94,1287	0/1:5,0:5:10.08:10,0,15	0/0:9,0:8:18.02:0,18,215	0/0:19,0:17:33.17:0,33,354	0/0:17,0:17:14.54:0,15,165	0/0:18,0:18:54.16:0,54,862	0/0:22,0:22:63.07:0,63,908	0/1:14,0:14:1.46:144,0,1	0/0:21,0:21:57.19:0,57,940	0/1:21,1:22:6.50:92,0,7	1/1:11,1:12:4.37:88,4,0	0/0:18,0:18:51.65:0,52,341	0/0:13,0:13:12.29:0,12,156	0/0:19,0:19:29.90:0,30,274	1/1:24,0:24:28.84:101,29,0	0/1:30,1:31:36.98:109,0,37	0/1:25,4:29:3.67:248,0,4	0/1:25,2:27:38.48:247,0,38	0/1:18,0:18:59.59:60,0,84	0/0:17,0:17:0.06:0,0,145	0/0:6,0:6:3.35:0,3,16	0/0:23,0:23:44.88:0,45,390	0/1:11,2:13:2.05:98,0,2	0/1:25,3:28:32.78:153,0,33	0/1:22,0:21:25.75:26,0,199	1/1:23,1:24:44.24:357,44,0	0/1:25,2:27:77.25:175,0,77	1/1:8,0:8:10.92:33,11,0
chr10	11094977	.	AG	A	6512.87	PASS	AB=1.000;AC=40;AF=0.714;AN=56;BaseQRankSum=1.467;DP=491;FS=0.910;HRun=3;HaplotypeScore=78.0622;InbreedingCoeff=0.7641;MQ=67.09;MQ0=1;MQRankSum=1.367;QD=18.35;ReadPosRankSum=1.520;VQSLOD=4.5163;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:77.04:0,77,843	1/1:1,4:5:9.02:111,9,0	0/0:9,0:8:18.02:0,18,199	0/0:18,2:17:29.53:0,30,300	0/1:12,0:12:0.86:12,0,1	0/0:18,0:18:51.07:0,51,597	0/0:21,0:21:62.66:0,63,695	1/1:17,0:17:40.31:298,40,0	0/0:21,0:21:57.11:0,57,659	1/1:4,16:20:54.50:603,55,0	1/1:6,7:13:33.34:367,33,0	0/0:13,0:13:9.22:0,9,18	1/1:9,0:9:3.89:35,4,0	1/1:8,0:8:1.69:17,2,0	1/1:5,19:24:42.05:491,42,0	1/1:8,22:30:21.32:602,21,0	1/1:6,21:27:65.77:698,66,0	1/1:15,12:27:64.15:645,64,0	1/1:14,0:14:28.04:174,28,0	1/1:13,0:13:13.44:71,13,0	1/1:5,0:5:2.84:14,3,0	0/1:14,0:14:7.98:8,0,19	1/1:4,9:13:32.52:347,33,0	1/1:7,20:27:32.50:542,33,0	1/1:19,0:18:11.59:82,12,0	1/1:2,22:24:71.77:682,72,0	1/1:16,10:26:48.60:530,49,0	1/1:0,8:8:15.05:185,15,0
chr10	11094980	.	GT	G	1725.64	PASS	AB=0.925;AC=21;AF=0.375;AN=56;BaseQRankSum=4.232;DP=487;FS=16.355;HRun=1;HaplotypeScore=96.4844;InbreedingCoeff=0.4561;MQ=70.83;MQ0=1;MQRankSum=2.390;QD=6.42;ReadPosRankSum=4.308;VQSLOD=-0.7384;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:76.11:0,76,1086	1/1:4,0:4:8.53:49,9,0	0/0:14,0:13:36.03:0,36,442	0/0:21,0:18:44.86:0,45,537	0/0:10,1:11:11.36:0,11,77	0/0:17,0:17:48.16:0,48,723	0/0:22,0:22:62.93:0,63,907	0/1:17,1:18:0.30:0,0,97	0/0:21,0:21:51.17:0,51,762	0/1:19,1:20:24.88:116,0,25	1/1:13,0:13:15.57:83,16,0	0/0:12,1:13:32.52:0,33,215	0/0:9,1:10:10.22:0,10,86	0/0:5,2:7:4.88:0,5,36	0/1:22,3:25:12.21:210,0,12	0/1:26,4:30:22.33:294,0,22	1/1:25,1:26:38.77:225,39,0	1/1:23,1:24:14.93:179,15,0	0/1:12,2:14:32.72:47,0,33	0/0:11,1:12:17.03:0,17,106	0/0:7,0:7:4.55:0,5,29	0/0:13,0:13:34.36:0,34,229	1/1:11,1:12:18.56:149,19,0	0/1:26,1:27:6.11:175,0,6	0/0:18,1:18:29.39:0,29,197	1/1:23,1:24:38.66:195,39,0	0/1:23,1:24:95.70:132,0,96	1/1:8,0:8:13.94:64,14,0
chr10	11095048	.	A	ACCC	7073.52	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=10.038;DP=462;FS=37.651;HRun=0;HaplotypeScore=113.6444;InbreedingCoeff=0.9721;MQ=71.11;MQ0=5;MQRankSum=-9.424;QD=57.51;ReadPosRankSum=1.613;VQSLOD=3.1866;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:60.21:0,60,1118	0/0:8,0:8:21.07:0,21,391	0/0:38,0:28:77.86:0,78,1254	0/0:41,0:35:90.73:0,91,1576	1/1:0,11:11:20.84:462,21,0	0/0:14,0:14:42.14:0,42,783	0/0:17,0:17:51.17:0,51,951	1/1:0,8:9:27.08:571,27,0	0/0:11,0:11:33.11:0,33,615	0/0:10,0:10:30.10:0,30,560	0/0:11,0:11:33.11:0,33,605	1/1:0,13:14:35.99:771,36,0	1/1:0,15:15:45.15:1027,45,0	1/1:0,13:14:35.86:811,36,0	0/0:29,0:29:69.22:0,69,1256	0/0:21,0:21:51.17:0,51,950	0/0:19,0:19:45.15:0,45,839	0/0:19,0:19:51.65:0,52,952	1/1:0,11:12:36.12:816,36,0	1/1:0,13:13:33.02:720,33,0	1/1:0,14:14:27.06:608,27,0	1/1:0,11:11:29.98:677,30,0	0/0:11,0:11:29.98:0,30,551	0/0:25,0:25:54.16:0,54,974	1/1:0,10:10:26.79:610,27,0	0/0:20,0:20:60.18:0,60,1047	0/0:18,0:18:54.19:0,54,1007	0/0:3,0:3:3.01:0,3,56
chr10	11095060	.	GACACACAC	G	84.87	PASS	AB=0.882;AC=7;AF=0.167;AN=42;BaseQRankSum=2.414;DP=516;FS=8.874;HRun=0;HaplotypeScore=181.1025;InbreedingCoeff=0.4602;MQ=60.51;MQ0=20;MQRankSum=-1.487;QD=1.13;ReadPosRankSum=1.487;VQSLOD=2.3490;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:23,6:29:3.01:74,3,0	0/0:10,0:9:3.01:0,3,117	./.	./.	./.	0/0:11,0:11:0:0,0,0	1/1:14,0:13:2.59:10,3,0	0/0:13,0:12:3.63:0,4,9	./.	0/0:14,0:15:21.54:0,22,794	0/0:10,0:10:9.03:0,9,281	0/1:13,0:15:49.75:50,0,83	1/1:16,0:17:3.01:56,3,0	0/0:15,0:15:3.01:0,3,34	0/0:36,0:36:24.06:0,24,793	0/0:19,0:20:21.05:0,21,606	0/0:25,0:24:32.30:0,32,916	0/0:27,0:26:28.65:0,29,856	0/0:16,0:17:0:0,0,0	0/0:16,0:16:0:0,0,0	./.	./.	0/0:10,0:9:15.05:0,15,483	0/0:32,0:31:27.05:0,27,840	./.	0/0:19,0:18:20.26:0,20,526	0/0:21,0:21:27.09:0,27,1021	0/0:10,0:10:18.16:0,18,545
chr10	11096242	.	T	TA	11573.99	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-17.325;DP=730;FS=0.901;HRun=1;HaplotypeScore=67.9767;InbreedingCoeff=0.9991;MQ=87.23;MQ0=0;MQRankSum=-3.460;QD=38.07;ReadPosRankSum=5.954;VQSLOD=5.0361;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,138,1787	1/1:1,9:10:21.07:310,21,0	0/0:32,0:32:84.22:0,84,1028	0/0:22,0:23:61.45:0,61,656	0/0:30,0:30:84.25:0,84,1072	0/0:18,0:18:51.16:0,51,650	0/0:21,0:21:63.19:0,63,791	0/0:37,0:37:99:0,108,1352	0/0:26,0:26:69.20:0,69,866	1/1:2,22:25:72.22:1021,72,0	1/1:0,21:21:54.14:775,54,0	0/0:32,0:32:93.28:0,93,1178	0/0:21,0:21:63.20:0,63,816	0/0:35,0:35:99:0,102,1290	1/1:1,34:35:90.30:1331,90,0	1/1:0,40:40:99:1597,108,0	1/1:0,37:37:96.32:1421,96,0	1/1:0,30:30:75.25:1110,75,0	0/0:21,0:21:60.19:0,60,763	0/0:23,0:23:66.20:0,66,841	0/0:29,0:29:84.24:0,84,1057	0/0:18,0:18:48.14:0,48,607	1/1:1,17:18:39.13:577,39,0	1/1:1,30:31:52.51:1084,53,0	0/0:13,0:13:39.08:0,39,463	1/1:0,30:30:90.23:1244,90,0	1/1:0,18:19:51.17:749,51,0	1/1:0,8:8:24.08:355,24,0
chr10	11101139	.	T	TCTCC	493.67	PASS	AC=10;AF=0.333;AN=30;BaseQRankSum=2.015;DP=85;FS=0.000;HRun=0;HaplotypeScore=24.3959;InbreedingCoeff=0.5400;MQ=86.16;MQ0=1;MQRankSum=-1.592;QD=41.14;ReadPosRankSum=2.038;VQSLOD=3.4387;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:8,0:7:9.32:0,9,145	0/0:10,0:4:2.91:0,3,51	./.	0/0:1,0:1:3.01:0,3,51	0/0:13,0:13:27.06:0,27,393	0/0:2,0:2:3:0,3,25	0/0:1,0:1:3.01:0,3,51	./.	./.	./.	0/0:2,0:2:6.02:0,6,86	./.	1/1:1,0:1:2.37:8,2,0	1/1:0,3:3:6.02:150,6,0	1/1:0,4:4:6.02:150,6,0	1/1:0,1:1:3.01:75,3,0	0/0:3,0:3:8.22:0,8,60	./.	0/0:24,0:24:54.06:0,54,751	./.	./.	1/1:0,3:3:9.03:225,9,0	0/0:2,0:2:5.99:0,6,50	./.	./.	./.
chr10	11101803	.	A	AGGGG	339.70	PASS	AC=6;AF=0.75;AN=8;DP=14;FS=0.000;HRun=3;HaplotypeScore=28.0804;MQ=32.84;MQ0=0;QD=56.62;VQSLOD=2.1384;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,1:1:3.01:80,3,0	./.	./.	./.	0/0:1,0:1:0:0,0,0	./.	1/1:3,1:4:12.01:245,12,0	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	1/1:1,0:1:3.01:81,3,0	./.	./.	./.	./.
chr10	11103646	.	G	GAA	3498.88	PASS	AB=0.766;AC=46;AF=0.821;AN=56;BaseQRankSum=3.269;DP=434;FS=2.312;HRun=15;HaplotypeScore=127.8610;InbreedingCoeff=0.1392;MQ=49.28;MQ0=25;MQRankSum=-3.080;QD=8.39;ReadPosRankSum=0.041;VQSLOD=1.8924;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,16:24:15.04:181,15,0	1/1:9,0:7:12.02:116,12,0	0/1:15,0:2:0:0,0,0	0/0:17,0:6:6.11:0,6,33	1/1:11,1:17:29.73:243,30,0	1/1:5,4:11:8.39:85,8,0	0/1:8,13:21:4.86:182,0,5	0/1:16,1:30:23.76:75,0,24	1/1:8,2:12:11.39:106,11,0	1/1:15,0:14:15.01:139,15,0	1/1:10,0:10:12.03:125,12,0	1/1:7,0:19:19.51:92,20,0	0/1:4,0:11:11.14:21,0,11	1/1:4,0:9:8.48:29,8,0	1/1:9,0:9:15.02:146,15,0	1/1:11,0:11:17.93:163,18,0	1/1:21,0:20:25.96:177,26,0	1/1:9,0:22:30.03:282,30,0	0/1:16,1:19:46.13:79,0,46	0/1:11,1:18:45.27:62,0,45	0/1:8,0:12:11.93:18,0,12	1/1:3,1:10:10.08:39,10,0	1/1:19,0:15:32.45:281,32,0	0/1:5,0:5:0:0,0,0	1/1:15,0:15:27.48:208,27,0	1/1:17,0:16:32.85:290,33,0	1/1:6,0:10:18.03:171,18,0	1/1:4,0:10:20.99:191,21,0
chr10	11104100	.	C	CA	1618.70	PASS	AB=0.833;AC=48;AF=0.857;AN=56;BaseQRankSum=3.690;DP=432;FS=3.056;HRun=17;HaplotypeScore=149.7710;InbreedingCoeff=0.4994;MQ=63.09;MQ0=2;MQRankSum=-3.790;QD=4.25;ReadPosRankSum=-1.191;VQSLOD=0.7044;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:26,2:29:46.59:291,47,0	1/1:7,0:7:9.06:44,9,0	0/0:17,0:11:13.97:0,14,70	0/0:12,0:10:2.57:0,3,15	0/1:20,0:19:2.15:22,0,2	1/1:11,14:25:7.22:49,7,0	1/1:4,6:11:11.81:82,12,0	1/1:27,0:19:11.50:55,11,0	0/1:10,10:20:14:57,0,14	1/1:14,0:14:21.84:101,22,0	1/1:12,0:11:20:95,20,0	1/1:16,0:16:22.43:106,22,0	1/1:9,0:9:5.60:26,6,0	1/1:11,0:11:13.99:66,14,0	1/1:8,0:8:9.03:45,9,0	1/1:18,0:18:14.49:67,14,0	1/1:7,0:7:13.59:59,14,0	1/1:16,0:15:9.88:40,10,0	1/1:24,0:20:19.68:91,20,0	1/1:18,0:18:12.35:57,12,0	1/1:6,0:6:2.90:16,3,0	1/1:9,0:9:14.46:67,14,0	1/1:11,0:9:6.60:31,7,0	1/1:4,0:4:5.68:28,6,0	0/0:20,0:22:25.71:0,26,142	1/1:20,0:20:18.60:88,19,0	1/1:21,0:20:24.16:104,24,0	1/1:18,0:15:17.36:72,17,0
chr10	11104106	.	A	AAAAAAC	4761.26	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=7.950;DP=421;FS=21.382;HRun=0;HaplotypeScore=163.7027;InbreedingCoeff=0.2168;MQ=59.15;MQ0=3;MQRankSum=-9.461;QD=18.17;ReadPosRankSum=8.354;VQSLOD=1.9949;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:47.36:0,47,419	1/1:5,0:5:9.44:140,9,0	0/0:20,0:12:26.41:0,26,266	0/0:12,0:9:21.27:0,21,135	0/0:17,0:16:37.80:0,38,387	0/0:24,0:24:29.73:0,30,256	0/0:11,0:11:20.87:0,21,191	0/1:29,0:19:60.98:176,0,61	0/0:20,0:20:23.78:0,24,277	0/1:12,0:12:11.23:251,0,11	0/1:10,0:9:3.98:243,0,4	1/1:0,15:17:24.08:723,24,0	1/1:2,8:11:5.88:181,6,0	1/1:2,17:19:14.91:453,15,0	0/1:6,0:6:7.08:136,0,7	1/1:13,0:13:11.64:178,12,0	1/1:7,0:7:11.44:192,11,0	0/1:13,0:12:15.94:176,0,16	0/1:23,0:19:24.34:404,0,24	0/1:11,0:11:4.49:194,0,4	0/1:5,0:5:17.73:96,0,18	1/1:1,7:10:20.50:426,21,0	1/1:9,0:7:5.51:92,6,0	1/1:5,0:5:6.02:84,6,0	0/0:22,0:22:66.02:0,66,984	0/1:19,0:19:99:183,0,134	0/1:20,0:19:7.50:265,0,7	0/1:18,0:15:80.44:169,0,80
chr10	11104115	.	A	AC	812.71	PASS	AB=1.000;AC=16;AF=0.286;AN=56;BaseQRankSum=1.617;DP=433;FS=56.712;HRun=0;HaplotypeScore=83.4648;InbreedingCoeff=0.1073;MQ=59.18;MQ0=3;MQRankSum=-0.627;QD=4.73;ReadPosRankSum=4.539;VQSLOD=0.7214;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:73.06:0,73,454	0/1:5,0:5:11.56:20,0,12	0/0:20,0:12:32.98:0,33,344	0/0:11,0:9:18.25:0,18,159	1/1:5,14:18:24.33:223,24,0	0/0:24,0:24:29.63:0,30,222	0/0:10,0:10:15.61:0,16,100	0/0:34,0:24:62.33:0,62,491	0/0:16,0:16:13.57:0,14,140	0/1:14,0:14:38.61:82,0,39	0/1:12,0:11:7.15:103,0,7	0/0:19,0:19:24.02:0,24,130	0/0:9,0:9:11.27:0,11,74	0/0:18,0:18:19.06:0,19,106	0/1:8,0:8:11.68:12,0,54	0/1:18,0:18:3.14:3,0,109	0/1:8,0:8:16.82:34,0,17	0/0:12,0:11:0.56:0,1,110	0/0:29,0:25:74.12:0,74,554	0/0:15,0:15:29.71:0,30,215	0/0:6,0:6:17.90:0,18,139	0/0:9,0:9:16.36:0,16,80	0/1:6,0:4:11.24:21,0,11	1/1:6,0:6:2.94:19,3,0	1/1:19,1:20:45.20:254,45,0	0/1:18,0:18:29.47:126,0,29	0/1:22,0:21:48.70:49,0,84	0/1:16,0:13:33.62:34,0,94
chr10	11104116	.	A	ACC	3417.15	PASS	AB=0.655;AC=17;AF=0.304;AN=56;BaseQRankSum=-7.066;DP=439;FS=52.001;HRun=0;HaplotypeScore=81.7940;InbreedingCoeff=0.0266;MQ=56.91;MQ0=3;MQRankSum=0.836;QD=17.99;ReadPosRankSum=3.327;VQSLOD=1.1921;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:83.24:0,83,824	0/1:1,4:5:13.82:129,0,14	0/0:21,0:13:33.11:0,33,468	0/0:8,0:6:7.48:0,7,135	1/1:16,2:17:47.59:545,48,0	0/0:24,0:24:29.91:0,30,344	0/0:10,0:10:20.56:0,21,264	0/0:34,0:24:61.16:0,61,753	0/0:16,0:16:22.31:0,22,286	0/1:4,10:15:36.09:436,0,36	0/1:5,7:11:37.11:262,0,37	0/0:18,0:18:25.43:0,25,211	0/0:9,0:9:11.85:0,12,116	0/0:18,0:18:20.52:0,21,168	0/1:4,5:9:59.36:126,0,59	0/1:7,11:18:99:111,0,157	0/1:3,6:9:20.43:125,0,20	0/1:10,3:12:99:115,0,158	0/0:30,0:26:75.15:0,75,932	0/0:15,0:15:34.33:0,34,415	0/0:6,0:6:18.06:0,18,236	0/0:10,0:10:20.76:0,21,165	0/1:5,2:6:22.02:73,0,22	1/1:0,6:6:3.35:36,3,0	1/1:21,0:21:33.72:545,34,0	0/1:5,13:18:61.01:489,0,61	0/1:8,14:21:99:233,0,144	0/1:13,3:13:99:195,0,114
chr10	11104129	.	AGT	A	402.02	PASS	AB=0.917;AC=12;AF=0.214;AN=56;BaseQRankSum=7.977;DP=406;FS=31.784;HRun=0;HaplotypeScore=74.6858;InbreedingCoeff=-0.1182;MQ=59.72;MQ0=1;MQRankSum=-7.419;QD=2.96;ReadPosRankSum=1.177;VQSLOD=0.3330;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:66.23:0,66,1298	0/1:4,1:5:26.78:27,0,167	0/0:18,0:14:39.09:0,39,711	0/0:8,0:7:18.53:0,19,347	0/0:15,0:14:39.13:0,39,750	0/0:16,0:16:33.11:0,33,653	0/0:8,0:8:18.06:0,18,332	0/0:30,3:29:75.24:0,75,1485	0/0:14,0:14:24.02:0,24,364	0/1:18,2:20:11.49:11,0,1000	0/1:10,1:11:16.48:16,0,494	0/0:23,0:23:50.76:0,51,909	0/0:12,0:12:27.09:0,27,502	0/0:11,0:11:15:0,15,280	0/1:10,0:10:13.91:14,0,362	0/1:13,2:15:44.11:137,0,44	0/0:13,1:14:21.06:0,21,546	0/1:9,2:11:99:105,0,328	0/0:28,0:27:81.24:0,81,1532	0/0:15,0:15:39.13:0,39,775	0/0:8,0:8:24.08:0,24,477	0/0:9,0:9:24.08:0,24,461	0/1:8,0:8:15.20:15,0,394	1/1:4,0:5:2.69:16,3,0	0/0:15,0:15:42.14:0,42,827	0/1:18,0:18:12.87:13,0,732	0/1:22,3:24:99:140,0,579	0/1:7,1:8:54.98:55,0,304
chr10	11104644	.	TATGTA	T	1395.49	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=8.332;DP=505;FS=0.762;HRun=0;HaplotypeScore=100.2732;InbreedingCoeff=0.9794;MQ=81.54;MQ0=0;MQRankSum=-7.805;QD=35.78;ReadPosRankSum=-1.123;VQSLOD=3.3272;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,102,3292	0/0:9,0:9:24.08:0,24,798	0/0:21,0:21:63.19:0,63,1996	0/0:11,0:11:24:0,24,592	0/0:12,0:12:30.09:0,30,922	0/0:20,0:20:60.19:0,60,1914	0/0:26,0:26:78.27:0,78,2517	1/1:1,10:11:30.10:524,30,0	0/0:23,0:23:66.21:0,66,2122	0/0:14,0:14:42.14:0,42,1362	0/0:10,0:10:24.08:0,24,790	0/0:26,0:26:78.27:0,78,2596	0/0:21,0:21:63.15:0,63,1932	0/0:19,0:19:54.19:0,54,1788	0/0:26,0:26:78.27:0,78,2572	0/0:35,0:35:99:0,105,3398	0/0:23,0:23:69.24:0,69,2245	0/0:17,0:17:51.18:0,51,1698	1/1:2,6:8:24.07:396,24,0	1/1:1,3:4:9.03:158,9,0	1/1:5,11:16:26.77:474,27,0	0/0:10,0:10:30.09:0,30,924	0/0:25,0:25:75.26:0,75,2494	0/0:33,0:33:99:0,99,3182	0/0:14,0:14:36.12:0,36,1198	0/0:13,0:13:39.12:0,39,1213	0/0:16,0:16:48.16:0,48,1539	0/0:7,0:7:21.07:0,21,699
chr10	11104651	.	TTGAA	T	1307.47	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=9.040;DP=503;FS=3.581;HRun=0;HaplotypeScore=91.1263;InbreedingCoeff=0.9801;MQ=82.49;MQ0=0;MQRankSum=-6.430;QD=36.32;ReadPosRankSum=-1.677;VQSLOD=2.9952;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:96.32:0,96,2703	0/0:9,0:9:27.09:0,27,734	0/0:20,0:20:60.20:0,60,1596	0/0:11,0:12:28.11:0,28,617	0/0:14,0:14:39.05:0,39,965	0/0:19,0:19:57.20:0,57,1653	0/0:26,0:26:78.26:0,78,2168	1/1:0,14:14:39.09:578,39,0	0/0:20,0:20:60.21:0,60,1706	0/0:13,0:13:36.12:0,36,959	0/0:9,0:9:27.05:0,27,637	0/0:27,0:27:81.28:0,81,2321	0/0:20,0:20:60.20:0,60,1649	0/0:19,0:19:57.15:0,57,1538	0/0:27,0:27:81.28:0,81,2313	0/0:34,0:34:99:0,102,2944	0/0:24,0:24:72.25:0,72,2082	0/0:18,0:18:54.19:0,54,1561	1/1:1,6:7:21.07:336,21,0	1/1:0,3:3:9.03:138,9,0	1/1:1,11:12:27.09:412,27,0	0/0:13,0:13:39.13:0,39,1047	0/0:26,0:26:78.27:0,78,2247	0/0:34,0:34:99:0,102,2858	0/0:16,0:16:48.16:0,48,1260	0/0:13,0:13:39.13:0,39,1071	0/0:15,0:15:45.15:0,45,1286	0/0:7,0:7:21.07:0,21,608
chr10	11105610	.	A	AT	811.76	PASS	AB=0.744;AC=15;AF=0.268;AN=56;BaseQRankSum=-7.206;DP=538;FS=15.135;HRun=15;HaplotypeScore=66.2100;InbreedingCoeff=0.1866;MQ=71.70;MQ0=4;MQRankSum=-0.186;QD=4.23;ReadPosRankSum=1.115;VQSLOD=0.0729;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,25:39:7.80:268,8,0	0/1:10,2:13:24.71:25,0,88	0/0:23,0:14:13.56:0,14,65	0/0:13,1:12:2.96:0,3,8	0/0:3,0:24:36.61:0,37,104	0/1:1,8:10:0.19:97,0,0	0/1:8,8:17:25.54:79,0,26	0/0:8,0:33:47.56:0,48,140	1/1:7,0:14:5.68:28,6,0	0/0:15,0:15:19.53:0,20,113	0/1:14,1:15:29.98:30,0,96	1/1:11,9:20:2.92:127,3,0	0/1:5,5:11:18.32:72,0,18	0/1:4,6:10:3.03:86,0,3	0/1:16,2:18:7.86:8,0,72	0/0:18,0:22:15.08:0,15,162	0/0:24,0:25:51.78:0,52,310	0/0:19,1:21:11.91:0,12,178	0/0:10,0:16:19.18:0,19,65	0/0:3,0:16:27.68:0,28,95	0/0:8,0:22:20.24:0,20,59	0/1:3,7:11:9.10:143,0,9	0/1:11,1:14:4.04:4,0,79	0/0:29,0:32:47.81:0,48,281	0/0:7,0:22:20.28:0,20,58	0/0:20,0:20:26.29:0,26,161	0/0:15,3:19:0.17:0,0,106	0/0:16,0:16:32.34:0,32,196
chr10	11105786	.	AAGAAAAAG	A	6844.09	PASS	AB=0.988;AC=41;AF=0.732;AN=56;BaseQRankSum=-10.275;DP=440;FS=0.000;HRun=0;HaplotypeScore=151.5073;InbreedingCoeff=0.1539;MQ=66.45;MQ0=6;MQRankSum=0.662;QD=17.03;ReadPosRankSum=-3.618;VQSLOD=3.3805;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:35,0:35:99:107,0,754	1/1:2,9:11:14.27:238,14,0	0/0:30,0:11:24.62:0,25,357	0/1:35,0:17:0.48:0,0,210	0/1:30,0:32:99:142,0,517	0/1:15,0:15:84.96:85,0,358	0/1:4,0:4:19.34:19,0,42	1/1:30,0:30:9.26:495,9,0	0/0:6,0:6:5.94:0,6,164	1/1:10,0:9:20.97:319,21,0	1/1:9,1:10:29.02:463,29,0	0/1:9,0:9:3.51:4,0,214	0/0:2,0:2:6.02:0,6,68	0/1:10,0:10:45.98:46,0,241	1/1:0,10:10:3.01:83,3,0	1/1:12,3:14:42.07:742,42,0	1/1:27,3:30:59.97:1075,60,0	1/1:15,4:19:44.10:649,44,0	1/1:14,0:14:17.70:269,18,0	1/1:16,0:16:3.58:205,4,0	1/1:8,0:7:15.79:110,16,0	0/1:4,0:4:32.52:55,0,33	1/1:0,8:8:9.04:94,9,0	1/1:10,2:12:28.58:396,29,0	0/1:19,0:20:54.28:54,0,392	1/1:3,21:24:64.75:731,65,0	1/1:2,14:16:17.16:394,17,0	1/1:5,0:5:3.01:68,3,0
chr10	11105787	.	AG	A	5289.65	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-5.211;DP=441;FS=3.926;HRun=1;HaplotypeScore=116.7272;InbreedingCoeff=0.6385;MQ=66.48;MQ0=6;MQRankSum=-0.959;QD=14.07;ReadPosRankSum=0.659;VQSLOD=4.3727;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:35,0:35:74.76:421,75,0	1/1:11,0:11:7.29:43,7,0	0/0:30,0:11:8.38:0,8,111	0/0:35,0:17:10.78:0,11,142	1/1:23,9:32:18.69:461,19,0	1/1:14,1:15:34.05:251,34,0	1/1:4,0:4:7.54:52,8,0	1/1:30,1:31:67.12:519,67,0	1/1:6,0:6:12:56,12,0	1/1:10,0:9:20.86:185,21,0	1/1:6,2:10:28.34:204,28,0	1/1:9,0:9:23.16:172,23,0	1/1:2,0:2:5.68:38,6,0	1/1:10,0:10:17.69:144,18,0	1/1:10,0:10:2.97:20,3,0	1/1:14,1:14:41.27:277,41,0	1/1:27,2:30:58.12:413,58,0	1/1:19,0:19:41.97:311,42,0	1/1:14,0:14:40.28:301,40,0	1/1:12,4:16:28.04:213,28,0	1/1:7,1:7:20.95:177,21,0	1/1:4,0:4:10:57,10,0	1/1:8,0:8:9.95:40,10,0	1/1:12,0:12:25.04:182,25,0	1/1:14,6:20:17.54:358,18,0	1/1:23,0:24:40.78:275,41,0	1/1:14,0:16:13.13:97,13,0	1/1:0,0:5:3:25,3,0
chr10	11105790	.	A	AAG	849.60	PASS	AB=0.855;AC=4;AF=0.071;AN=56;BaseQRankSum=6.576;DP=463;FS=2.812;HRun=0;HaplotypeScore=149.9283;InbreedingCoeff=-0.0538;MQ=68.53;MQ0=6;MQRankSum=-2.437;QD=9.65;ReadPosRankSum=0.603;VQSLOD=3.6357;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:72.82:0,73,595	0/0:11,0:11:1.18:0,1,45	0/0:37,0:17:18.77:0,19,269	0/0:37,0:19:11.98:0,12,259	0/1:19,16:35:55.54:590,0,56	0/0:15,0:15:21.60:0,22,225	0/0:4,0:4:2.75:0,3,24	0/0:31,0:31:48.86:0,49,372	0/0:6,0:6:11.08:0,11,62	0/0:11,0:10:14.76:0,15,118	0/0:12,0:12:11.27:0,11,108	0/0:10,0:10:23.91:0,24,193	0/0:3,0:3:9:0,9,79	0/0:10,0:10:23.17:0,23,180	0/0:10,0:10:2.60:0,3,10	0/1:15,0:14:0.93:1,0,119	0/0:29,0:29:36.30:0,36,262	0/0:21,0:21:17.28:0,17,212	0/0:13,0:13:35.31:0,35,219	0/0:14,0:17:21.98:0,22,133	0/0:8,0:8:16.64:0,17,122	0/0:4,0:4:5.88:0,6,43	0/0:8,0:8:2.11:0,2,7	0/0:12,0:12:13:0,13,128	0/1:14,8:22:99:342,0,140	0/0:24,0:24:45.04:0,45,345	0/1:16,0:16:13.77:14,0,17	0/0:5,0:5:2.88:0,3,15
chr10	11105793	.	AG	A	4951.20	PASS	AB=1.000;AC=50;AF=0.893;AN=56;BaseQRankSum=-1.880;DP=468;FS=2.615;HRun=1;HaplotypeScore=127.5178;InbreedingCoeff=0.4810;MQ=69.81;MQ0=6;MQRankSum=-3.281;QD=12.57;ReadPosRankSum=2.049;VQSLOD=3.8883;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:35,0:35:73.28:440,73,0	0/1:11,0:11:22.11:51,0,22	0/0:35,0:16:13.53:0,14,161	0/0:39,0:22:9.78:0,10,180	1/1:34,1:35:63.78:345,64,0	1/1:15,0:15:32.44:237,32,0	1/1:5,0:5:10.23:78,10,0	1/1:27,1:28:58.89:458,59,0	1/1:6,0:6:10.94:46,11,0	1/1:13,0:12:27.30:229,27,0	1/1:14,0:14:37.35:236,37,0	1/1:10,0:10:22.12:170,22,0	1/1:3,0:3:7.49:40,7,0	1/1:11,0:11:17.11:160,17,0	1/1:10,0:10:2.88:15,3,0	1/1:15,1:15:42.87:257,43,0	1/1:27,1:28:39.27:342,39,0	1/1:23,0:23:42.33:338,42,0	1/1:0,15:15:43.48:326,43,0	1/1:4,13:17:29.73:214,30,0	1/1:9,0:8:20.96:178,21,0	1/1:4,0:4:10.03:58,10,0	1/1:8,0:8:9.61:36,10,0	0/1:12,0:12:0.37:166,0,0	1/1:20,1:21:45:201,45,0	1/1:24,0:24:4.23:231,4,0	1/1:16,0:16:17.14:83,17,0	1/1:5,0:5:2.97:20,3,0
chr10	11105794	.	GA	G	632.36	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=4.586;DP=474;FS=6.248;HRun=8;HaplotypeScore=142.8503;InbreedingCoeff=0.1650;MQ=69.66;MQ0=6;MQRankSum=-3.858;QD=4.48;ReadPosRankSum=2.871;VQSLOD=0.2765;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:56.38:0,56,342	0/0:11,0:11:2.07:0,2,18	0/0:34,0:16:10.62:0,11,165	0/1:38,0:21:3.81:4,0,130	1/1:27,8:35:63.17:420,63,0	0/0:15,0:15:7.02:0,7,100	0/0:5,0:5:1.95:0,2,17	0/0:28,0:28:2.05:0,2,27	0/0:7,0:7:13.45:0,13,67	0/0:13,0:12:0.98:0,1,21	0/0:14,0:14:6.41:0,6,19	0/1:10,0:10:10.25:10,0,37	0/0:3,0:3:6.06:0,6,35	0/0:11,0:11:0.99:0,1,57	0/0:11,0:11:2.61:0,3,24	0/0:16,0:15:6.39:0,6,36	0/0:30,0:30:17.50:0,18,121	0/0:23,0:23:1.46:0,1,10	0/0:15,0:15:4.31:0,4,24	0/1:18,0:18:7.43:7,0,19	0/1:10,0:9:0.70:1,0,21	0/1:4,0:4:1.04:1,0,8	0/0:8,0:8:4.37:0,4,21	0/0:12,0:12:3.04:0,3,26	1/1:15,6:21:45.61:312,46,0	0/0:24,0:24:4.26:0,4,80	0/0:16,0:16:3.06:0,3,6	1/1:5,0:5:0.47:1,0,0
chr10	11105796	.	A	AAG	958.97	PASS	AB=0.968;AC=13;AF=0.232;AN=56;BaseQRankSum=5.019;DP=486;FS=0.000;HRun=0;HaplotypeScore=152.1527;InbreedingCoeff=-0.1110;MQ=68.46;MQ0=6;MQRankSum=-3.988;QD=4.32;ReadPosRankSum=1.200;VQSLOD=2.9797;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:65.04:0,65,523	1/1:11,0:11:5.72:85,6,0	0/0:35,0:17:28.04:0,28,332	0/0:38,0:20:8.94:0,9,274	0/1:25,11:36:23.19:517,0,23	0/0:14,0:14:21.10:0,21,223	0/0:5,0:5:5.73:0,6,46	0/0:29,0:29:35.32:0,35,265	0/0:7,0:7:14.65:0,15,77	0/0:13,0:12:23.01:0,23,184	0/1:16,0:16:67.09:67,0,124	0/0:10,0:10:26.92:0,27,222	0/0:3,0:3:9:0,9,81	0/0:11,0:11:21.26:0,21,156	0/1:12,0:12:20.77:27,0,21	0/1:15,0:14:3.14:3,0,135	0/1:30,0:30:43.60:44,0,221	0/1:23,0:23:13.85:14,0,219	0/0:19,0:19:26.08:0,26,174	0/1:18,0:18:24.61:25,0,95	0/0:9,0:8:11.27:0,11,114	0/0:4,0:4:5.83:0,6,37	0/1:9,0:9:4.57:10,0,5	0/1:12,0:12:11.44:11,0,80	0/1:20,3:23:11.86:245,0,12	0/0:25,0:25:16.95:0,17,223	0/1:17,0:17:51.02:59,0,51	0/0:5,0:5:2.98:0,3,22
chr10	11105802	.	AG	A	1760.47	PASS	AB=0.987;AC=22;AF=0.393;AN=56;BaseQRankSum=7.445;DP=471;FS=126.705;HRun=1;HaplotypeScore=130.0339;InbreedingCoeff=-0.3991;MQ=73.33;MQ0=5;MQRankSum=-8.893;QD=5.12;ReadPosRankSum=-1.577;VQSLOD=0.2148;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:36,0:36:99:108,0,353	0/1:8,0:8:12.33:12,0,13	0/0:35,1:22:1.76:0,2,355	0/0:32,0:20:30.10:0,30,230	1/1:24,9:33:83.60:647,84,0	0/1:11,0:11:61.05:61,0,150	0/1:9,0:9:18.32:18,0,119	0/1:27,1:28:50.55:51,0,246	0/1:7,0:7:19.70:20,0,21	0/0:13,0:12:15.31:0,15,222	0/1:13,1:14:43.18:43,0,137	0/1:11,0:11:27.63:28,0,42	0/0:5,0:5:11.34:0,11,109	0/1:11,0:11:58.65:59,0,64	0/0:10,0:10:1.60:0,2,80	0/1:15,0:14:19.36:19,0,94	0/1:30,0:31:99:180,0,203	0/1:20,1:21:82.72:83,0,184	0/1:23,0:23:29.98:30,0,315	0/1:17,0:17:15.93:16,0,127	0/1:9,0:8:26.28:26,0,98	0/0:6,0:6:6.01:0,6,65	0/1:9,0:9:22.37:22,0,24	0/1:11,0:11:19.95:20,0,99	1/1:14,9:23:63.21:456,63,0	0/0:19,0:19:44.15:0,44,363	0/1:16,1:17:15.87:25,0,16	0/0:4,0:4:8.94:0,9,65
chr10	11105803	.	G	GA	931.74	PASS	AB=0.927;AC=5;AF=0.089;AN=56;BaseQRankSum=6.469;DP=470;FS=24.815;HRun=8;HaplotypeScore=136.6251;InbreedingCoeff=-0.1059;MQ=72.51;MQ0=5;MQRankSum=-5.422;QD=8.79;ReadPosRankSum=0.603;VQSLOD=0.3498;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:27.25:0,27,468	0/0:8,0:8:10.50:0,11,53	0/0:35,0:21:45.81:0,46,463	0/1:34,0:20:13.89:14,0,195	0/1:22,11:33:69.58:576,0,70	0/0:11,0:11:12.57:0,13,193	0/0:9,0:9:18.33:0,18,197	0/0:30,0:30:43.20:0,43,432	0/1:7,0:7:4.98:5,0,30	0/0:13,0:12:29.35:0,29,305	0/0:14,0:14:26.31:0,26,258	0/0:11,0:11:10.28:0,10,110	0/0:5,0:5:10.26:0,10,139	0/0:11,0:11:9.86:0,10,96	0/0:9,0:9:11.97:0,12,125	0/0:14,0:13:27.31:0,27,251	0/0:31,0:31:39.48:0,39,429	0/0:21,0:21:34.38:0,34,379	0/0:23,0:23:35.70:0,36,493	0/0:16,0:16:23.38:0,23,234	0/0:9,0:8:14.73:0,15,155	0/0:6,0:6:9.50:0,9,108	0/1:9,0:9:8:8,0,48	0/0:11,0:11:18.96:0,19,192	0/1:20,3:23:99:436,0,151	0/0:20,0:20:44.81:0,45,484	0/0:17,0:17:12.90:0,13,103	0/0:4,0:4:9.03:0,9,104
chr10	11107120	.	AT	A	1691.02	PASS	AB=0.808;AC=18;AF=0.321;AN=56;BaseQRankSum=7.266;DP=700;FS=2.195;HRun=2;HaplotypeScore=168.0166;InbreedingCoeff=-0.4760;MQ=49.91;MQ0=0;MQRankSum=-3.023;QD=3.42;ReadPosRankSum=-2.112;VQSLOD=-0.4014;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:26,16:42:30.29:30,0,460	0/1:10,4:14:47.80:90,0,48	0/1:23,1:19:29.32:29,0,537	0/0:17,0:17:43.22:0,43,674	0/1:27,0:27:8.71:9,0,328	0/0:22,0:21:11.48:0,11,318	0/1:15,11:26:99:117,0,291	0/1:25,15:34:99:342,0,830	0/0:18,0:18:14.96:0,15,178	0/1:21,13:31:99:385,0,660	0/1:17,9:25:44.02:44,0,284	0/1:27,22:49:81.19:81,0,655	0/1:12,9:21:11.60:12,0,303	0/0:16,7:23:18.16:0,18,342	0/0:23,0:23:11.03:0,11,81	0/0:31,0:31:26.20:0,26,375	0/1:15,12:28:99:100,0,381	0/0:11,0:11:14.82:0,15,144	0/1:17,14:30:99:398,0,625	0/1:19,14:33:38.70:39,0,397	0/0:12,11:23:29.50:0,29,366	0/1:13,6:19:14.01:14,0,286	0/1:18,0:18:87.76:88,0,222	0/1:15,1:16:17.59:18,0,223	0/1:28,0:28:21.81:22,0,249	0/1:18,0:18:32.95:33,0,432	0/0:30,0:30:15.83:0,16,157	0/0:8,0:8:11.87:0,12,123
chr10	11109456	.	G	GAAAA	17574.81	PASS	AC=40;AF=0.741;AN=54;BaseQRankSum=5.413;DP=424;FS=5.054;HRun=2;HaplotypeScore=245.7166;InbreedingCoeff=0.9569;MQ=63.48;MQ0=2;MQRankSum=-8.840;QD=47.37;ReadPosRankSum=5.153;VQSLOD=3.8904;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:26,4:30:75.65:1104,76,0	1/1:11,0:11:30.10:632,30,0	0/0:17,0:15:41.98:0,42,613	0/0:10,0:8:15.02:0,15,229	./.	1/1:21,3:24:72.20:1292,72,0	1/1:19,1:20:60.15:930,60,0	1/1:7,6:15:42.13:863,42,0	1/1:17,4:21:57.18:974,57,0	1/1:24,0:24:66.22:1155,66,0	1/1:13,0:13:31.56:402,32,0	0/0:4,0:4:6.49:0,6,84	0/0:6,0:6:12.01:0,12,182	0/0:5,0:5:15.04:0,15,185	1/1:22,0:22:63.21:1067,63,0	1/1:21,0:21:63.21:1145,63,0	1/1:19,0:19:45.08:721,45,0	1/1:10,0:10:27.08:537,27,0	1/1:10,5:16:48.12:938,48,0	1/1:14,2:16:48.16:795,48,0	1/1:5,4:9:26.56:424,27,0	0/0:4,0:4:9.02:0,9,108	1/1:22,0:22:62.73:968,63,0	1/1:14,1:15:26.73:388,27,0	0/0:7,0:7:18.06:0,18,236	1/1:23,0:23:69.19:1215,69,0	1/1:28,0:28:78:1249,78,0	1/1:12,0:12:36.12:775,36,0
chr10	11110273	.	A	AG	2189.27	PASS	AB=1.000;AC=30;AF=0.536;AN=56;BaseQRankSum=3.164;DP=603;FS=8.453;HRun=3;HaplotypeScore=91.8737;InbreedingCoeff=0.4772;MQ=62.51;MQ0=21;MQRankSum=1.481;QD=5.67;ReadPosRankSum=2.863;VQSLOD=0.1536;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:17.43:0,17,242	1/1:11,0:10:18.87:95,19,0	0/1:15,0:6:7.18:7,0,33	0/0:18,0:14:2.70:0,3,26	0/0:34,0:33:86.80:0,87,718	0/1:20,0:20:8.33:8,0,80	0/0:20,0:18:6.20:0,6,171	0/0:30,0:26:72:0,72,727	0/1:20,0:20:25.73:32,0,26	1/1:29,0:27:31.40:204,31,0	1/1:20,0:17:24.77:150,25,0	1/1:18,0:18:15.06:41,15,0	0/1:14,0:14:6.77:7,0,9	0/1:18,0:17:9.26:9,0,10	1/1:20,1:21:20.23:183,20,0	0/1:27,0:27:5.78:92,0,6	1/1:23,2:25:41.49:275,41,0	1/1:22,0:20:12.55:120,13,0	0/0:22,0:21:56.63:0,57,539	0/0:26,0:26:36.48:0,36,556	0/0:18,0:17:44.69:0,45,474	0/1:12,0:11:1.16:1,0,47	1/1:24,1:24:44.73:230,45,0	1/1:24,3:26:31.25:325,31,0	0/0:19,0:19:47.98:0,48,416	1/1:16,2:18:33.60:304,34,0	1/1:30,1:31:44.34:247,44,0	0/1:13,0:12:16.06:57,0,16
chr10	11110275	.	G	GGA	1638.46	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-5.920;DP=608;FS=5.382;HRun=0;HaplotypeScore=109.6677;InbreedingCoeff=0.9331;MQ=63.32;MQ0=21;MQRankSum=0.071;QD=25.60;ReadPosRankSum=3.445;VQSLOD=4.8240;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:72.05:0,72,481	0/0:11,0:10:26.63:0,27,272	0/0:17,0:6:10.09:0,10,97	0/0:19,0:15:2.18:0,2,48	0/0:35,0:34:84.14:0,84,825	0/0:20,0:21:23.68:0,24,245	0/0:20,0:18:32.14:0,32,344	0/0:31,0:27:74.88:0,75,954	0/0:19,0:19:39.24:0,39,201	0/0:29,0:27:72.81:0,73,756	0/0:22,0:19:49.04:0,49,471	1/1:4,13:17:39.13:630,39,0	1/1:2,13:15:32.72:505,33,0	1/1:6,12:17:32.91:431,33,0	0/0:20,0:20:53.77:0,54,559	0/0:26,0:26:65.90:0,66,744	0/0:26,0:26:65.08:0,65,666	0/0:21,0:19:47.68:0,48,477	0/0:23,0:22:56.88:0,57,638	0/0:23,0:23:59.95:0,60,762	0/0:18,0:17:47.94:0,48,618	1/1:7,6:13:23.74:232,24,0	0/0:25,0:24:68.42:0,68,694	0/0:26,0:25:62.36:0,62,631	0/0:18,0:18:48.09:0,48,491	0/0:19,0:19:43.36:0,43,372	0/0:33,0:33:80.85:0,81,845	0/0:11,0:10:26.33:0,26,286
chr10	11110276	.	G	GA	1690.40	PASS	AB=0.901;AC=18;AF=0.321;AN=56;BaseQRankSum=-2.640;DP=604;FS=1.345;HRun=13;HaplotypeScore=95.3734;InbreedingCoeff=0.6403;MQ=63.33;MQ0=21;MQRankSum=0.898;QD=7.90;ReadPosRankSum=2.639;VQSLOD=3.0759;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,19:31:6.89:349,7,0	0/0:10,0:10:19.59:0,20,127	0/1:17,0:6:12.35:12,0,38	0/0:19,0:15:5.44:0,5,38	0/0:9,0:34:44.75:0,45,130	1/1:10,10:22:35.67:408,36,0	0/1:9,10:18:40.33:227,0,40	0/0:33,2:31:33.67:0,34,377	1/1:4,15:20:35.22:355,35,0	0/0:25,0:26:55.72:0,56,350	0/0:22,0:19:33.63:0,34,208	1/1:15,0:18:36.46:171,36,0	1/1:13,0:13:26.47:121,26,0	1/1:15,0:16:29.63:146,30,0	0/0:17,0:19:25.96:0,26,240	0/0:24,0:24:58.38:0,58,387	0/0:25,0:25:15.49:0,15,276	0/0:20,0:18:29.93:0,30,199	0/1:18,1:23:8.70:9,0,172	0/0:22,1:23:21.69:0,22,284	0/0:15,1:17:13.93:0,14,226	1/1:11,0:12:16.96:82,17,0	0/0:25,0:24:47.52:0,48,327	0/0:26,0:25:2.23:0,2,227	0/0:4,0:18:29.45:0,29,97	0/1:19,0:19:3.12:3,0,136	0/0:30,0:31:48.23:0,48,398	0/0:11,0:10:17.77:0,18,122
chr10	11110277	.	A	AG	720.68	PASS	AB=0.967;AC=10;AF=0.179;AN=56;BaseQRankSum=2.395;DP=599;FS=4.228;HRun=3;HaplotypeScore=98.0196;InbreedingCoeff=0.5279;MQ=63.42;MQ0=21;MQRankSum=-1.076;QD=6.21;ReadPosRankSum=3.756;VQSLOD=0.8258;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:26.74:0,27,277	0/0:11,0:10:25.98:0,26,140	0/1:17,0:6:23.69:24,0,82	0/1:19,0:15:7.47:7,0,37	0/0:34,0:33:83.62:0,84,642	0/0:23,0:23:8.16:0,8,124	0/0:20,0:18:11.82:0,12,219	0/0:34,0:30:85.33:0,85,1004	0/1:19,0:19:2.37:2,0,50	0/0:28,0:26:69.32:0,69,397	0/0:23,0:20:47.46:0,47,258	1/1:19,0:19:37.66:251,38,0	1/1:13,0:13:10.81:198,11,0	1/1:14,2:15:28.99:237,29,0	0/0:19,0:19:54.77:0,55,318	0/0:23,0:23:59.83:0,60,366	0/0:25,0:25:63.89:0,64,363	0/0:20,0:18:32.02:0,32,265	0/0:23,0:22:58.30:0,58,605	0/0:23,0:23:62.76:0,63,770	0/0:18,0:17:45.07:0,45,566	0/1:11,2:12:31.16:156,0,31	0/0:25,0:24:66.71:0,67,367	0/0:26,0:25:52.38:0,52,366	0/0:19,0:19:47.80:0,48,384	0/0:18,0:18:46.22:0,46,227	0/0:29,0:29:80.44:0,80,461	0/0:11,0:10:26.45:0,26,190
chr10	11110827	.	G	GGGGATGAACCT	3423.53	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-2.424;DP=613;FS=2.584;HRun=0;HaplotypeScore=190.4586;InbreedingCoeff=0.9816;MQ=88.53;MQ0=0;MQRankSum=-8.621;QD=92.53;ReadPosRankSum=-1.948;VQSLOD=3.1134;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,120,4062	0/0:5,0:5:12.04:0,12,428	0/0:27,0:27:75.23:0,75,2205	0/0:19,0:19:51.17:0,51,1444	1/1:9,15:28:57.03:2263,57,0	0/0:14,0:14:42.14:0,42,1270	0/0:21,0:21:63.22:0,63,2129	0/0:34,0:34:93.30:0,93,2940	0/0:23,0:23:69.24:0,69,2366	0/0:23,0:23:69.22:0,69,2255	0/0:14,0:14:42.13:0,42,1369	0/0:21,0:21:60.21:0,60,2141	0/0:19,0:19:54.19:0,54,1879	0/0:19,0:19:57.18:0,57,1870	0/0:25,0:25:75.26:0,75,2629	0/0:26,0:26:75.23:0,75,2360	0/0:25,0:25:72.24:0,72,2352	0/0:25,0:25:72.25:0,72,2470	0/0:27,0:27:75.22:0,75,2285	0/0:14,0:14:39.12:0,39,1307	0/0:58,0:58:99:0,175,5616	0/0:9,0:9:27.09:0,27,917	0/0:14,0:14:39.13:0,39,1298	0/0:12,0:12:36.12:0,36,1280	1/1:3,6:9:21.07:1161,21,0	0/0:22,0:22:63.22:0,63,2221	0/0:25,0:25:75.26:0,75,2564	0/0:13,0:13:39.13:0,39,1392
chr10	11111113	.	TA	T	7291.61	PASS	AB=0.519;AC=15;AF=0.268;AN=56;BaseQRankSum=0.341;DP=565;FS=1.102;HRun=4;HaplotypeScore=89.9424;InbreedingCoeff=0.9175;MQ=64.84;MQ0=0;MQRankSum=0.926;QD=37.78;ReadPosRankSum=0.294;VQSLOD=4.1365;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,36:36:99:1419,102,0	0/0:13,0:13:39.13:0,39,613	0/0:8,0:8:24.05:0,24,345	0/0:13,0:13:18.15:0,18,236	0/0:14,0:14:30.10:0,30,476	1/1:0,16:16:39.13:544,39,0	1/1:0,37:37:99:1425,102,0	1/1:0,10:10:27.08:361,27,0	1/1:0,21:21:60.20:843,60,0	0/0:16,0:16:48.16:0,48,766	0/0:11,0:11:27.09:0,27,431	0/0:26,0:26:36.11:0,36,550	0/0:15,0:15:45.15:0,45,718	0/0:19,0:19:39.13:0,39,622	0/0:11,0:11:33.11:0,33,515	0/0:23,0:23:66.23:0,66,1055	0/0:31,0:31:93.32:0,93,1474	0/0:22,0:22:66.23:0,66,1055	1/1:0,19:19:57.17:768,57,0	0/1:1,13:14:8.75:464,0,9	1/1:0,40:40:99:1467,105,0	0/0:15,0:15:27.09:0,27,431	0/0:21,0:21:63.21:0,63,985	0/0:30,0:30:90.30:0,90,1408	0/0:17,0:17:27.09:0,27,431	0/0:25,0:25:75.25:0,75,1188	0/0:16,0:16:45.15:0,45,718	0/0:26,0:26:78.27:0,78,1247
chr10	11111153	.	TGCACGAAC	T	2065.99	PASS	AB=1.000;AC=19;AF=0.352;AN=54;BaseQRankSum=1.230;DP=518;FS=53.310;HRun=0;HaplotypeScore=173.6582;InbreedingCoeff=0.3582;MQ=61.45;MQ0=3;MQRankSum=2.315;QD=8.75;ReadPosRankSum=-2.656;VQSLOD=0.7056;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:23:68.57:105,0,69	0/0:12,0:12:26.92:0,27,420	0/0:22,0:14:42.01:0,42,544	0/0:26,0:19:44.94:0,45,757	./.	0/1:16,0:16:61.82:62,0,76	0/1:28,0:28:99:178,0,107	1/1:15,0:15:14.05:296,14,0	0/1:21,0:21:26.52:27,0,155	0/0:17,0:17:42.08:0,42,1023	0/0:9,0:9:18.05:0,18,564	1/1:0,20:20:12.04:330,12,0	1/1:9,2:11:26.92:354,27,0	1/1:3,8:11:9.03:247,9,0	0/0:12,0:12:32.95:0,33,725	0/0:28,0:28:72.10:0,72,2288	0/0:25,0:25:60.03:0,60,1294	0/0:25,0:25:72.08:0,72,1815	0/1:14,0:14:59.81:146,0,60	0/1:14,0:14:58.81:59,0,95	0/1:41,0:40:97.18:222,0,97	1/1:0,10:10:6.02:162,6,0	0/0:19,0:19:47.70:0,48,873	0/0:26,0:26:72.08:0,72,1682	1/1:0,0:9:3.01:61,3,0	0/0:21,0:21:57.07:0,57,1794	0/0:14,0:14:41.94:0,42,1051	0/0:21,0:21:60.15:0,60,1935
chr10	11111155	.	CACGA	C	5399.53	PASS	AC=26;AF=0.481;AN=54;BaseQRankSum=-0.635;DP=507;FS=16.241;HRun=0;HaplotypeScore=124.3043;InbreedingCoeff=0.9230;MQ=61.32;MQ0=6;MQRankSum=-0.276;QD=23.48;ReadPosRankSum=0.535;VQSLOD=3.4314;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:16,7:23:42.02:560,42,0	0/0:11,0:11:26.92:0,27,324	0/0:22,0:14:42.01:0,42,476	0/0:27,0:19:44.93:0,45,590	./.	1/1:9,7:16:33.02:490,33,0	1/1:17,9:26:59.95:738,60,0	1/1:14,1:15:39:347,39,0	1/1:9,12:21:48.12:803,48,0	0/0:15,0:15:41.81:0,42,729	0/0:8,0:8:18.05:0,18,376	1/1:21,0:20:12.03:138,12,0	1/1:11,0:11:26.90:233,27,0	1/1:9,0:9:9.03:102,9,0	0/0:12,0:12:3.44:0,3,542	0/0:28,0:28:72.09:0,72,1489	0/0:24,0:24:60.03:0,60,948	0/0:25,0:25:46.57:0,47,1230	1/1:10,4:13:39.01:488,39,0	1/1:6,7:13:36.03:539,36,0	1/1:28,11:38:68.03:862,68,0	1/1:10,0:10:6.02:66,6,0	0/0:19,0:19:47.70:0,48,633	0/0:25,0:25:72.04:0,72,1162	1/1:12,0:9:3.01:33,3,0	0/0:21,0:21:60.08:0,60,1218	0/0:14,0:14:41.94:0,42,721	0/0:21,0:21:60.10:0,60,1224
chr10	11111426	.	T	TTCCTCC	4623.52	PASS	AB=0.984;AC=19;AF=0.633;AN=30;BaseQRankSum=-5.645;DP=483;FS=4.001;HRun=0;HaplotypeScore=90.8164;InbreedingCoeff=0.4281;MQ=50.62;MQ0=208;MQRankSum=-0.166;QD=20.64;ReadPosRankSum=1.208;VQSLOD=4.3821;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	1/1:1,6:8:12.04:407,12,0	0/1:29,0:7:10.48:58,0,10	0/1:64,0:16:16.87:17,0,75	0/0:24,0:22:23.93:0,24,428	0/0:15,0:2:2.97:0,3,20	./.	./.	./.	1/1:6,16:21:48.16:1387,48,0	1/1:3,12:18:24.08:814,24,0	./.	./.	./.	./.	./.	1/1:2,1:1:3.01:102,3,0	./.	./.	0/1:13,0:13:22.66:23,0,556	./.	0/0:31,0:26:43.17:0,43,826	1/1:2,16:19:27.09:914,27,0	./.	0/0:28,0:26:56.84:0,57,1092	1/1:8,11:9:18.06:495,18,0	1/1:5,7:9:6.02:204,6,0	1/1:3,4:6:6.02:204,6,0
chr10	11112480	.	T	TTGTC	12536.29	PASS	AB=0.980;AC=26;AF=0.464;AN=56;BaseQRankSum=-14.883;DP=781;FS=10.941;HRun=0;HaplotypeScore=114.7240;InbreedingCoeff=0.8887;MQ=64.77;MQ0=4;MQRankSum=-0.308;QD=34.54;ReadPosRankSum=3.470;VQSLOD=4.7237;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,123,1946	1/1:4,11:15:32.94:694,33,0	0/0:28,0:23:30.10:0,30,424	0/1:24,0:21:1.74:2,0,307	0/0:33,0:33:78.18:0,78,1169	0/0:20,0:20:51.14:0,51,798	0/0:28,0:28:54.15:0,54,804	0/0:39,0:39:69.17:0,69,928	0/1:23,1:24:10.71:11,0,838	1/1:10,22:34:73.03:1417,73,0	1/1:3,17:21:53.40:906,53,0	0/0:27,0:27:75.18:0,75,1106	0/0:29,0:29:63.16:0,63,948	0/0:29,0:29:75.23:0,75,1176	1/1:4,30:32:51.18:1255,51,0	1/1:7,32:38:66.23:1625,66,0	1/1:9,21:30:45.15:1108,45,0	1/1:7,8:14:21.07:511,21,0	0/0:29,0:29:57.06:0,57,762	0/0:26,0:26:63.16:0,63,909	0/0:41,0:41:84.22:0,84,1233	0/0:24,0:24:57.16:0,57,855	1/1:3,14:18:21.02:517,21,0	1/1:5,31:35:60.21:1478,60,0	0/0:17,0:17:39.13:0,39,622	1/1:6,23:29:75.15:1502,75,0	1/1:8,22:32:42.01:1016,42,0	1/1:4,7:11:21.07:492,21,0
chr10	11112788	.	G	GA	3732.83	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-12.407;DP=653;FS=22.710;HRun=6;HaplotypeScore=70.3605;InbreedingCoeff=0.9679;MQ=61.73;MQ0=0;MQRankSum=-0.123;QD=31.63;ReadPosRankSum=0.938;VQSLOD=1.8421;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,42:48:99:1544,123,0	0/0:13,0:13:33.07:0,33,336	0/0:12,0:9:18.01:0,18,170	0/0:17,0:16:33.72:0,34,336	0/0:32,0:32:90.20:0,90,918	1/1:1,20:21:51.16:642,51,0	1/1:2,20:22:57.18:717,57,0	0/0:28,0:28:69.13:0,69,693	1/1:2,25:27:66.21:830,66,0	0/0:32,0:32:89.85:0,90,886	0/0:10,0:10:24.05:0,24,245	0/0:28,0:28:78.17:0,78,795	0/0:21,0:21:57.13:0,57,581	0/0:13,0:13:30.07:0,30,306	0/0:18,0:18:39.08:0,39,398	0/0:24,0:24:63.13:0,63,637	0/0:48,0:48:99:0,126,1285	0/0:19,0:19:54.10:0,54,542	0/0:22,0:22:57.07:0,57,556	0/0:24,0:24:63.13:0,63,632	0/0:27,0:27:63.12:0,63,635	0/0:21,0:21:54.10:0,54,543	0/0:15,0:14:24.52:0,25,246	0/0:41,0:41:99:0,117,1185	0/0:14,0:14:36.08:0,36,367	0/0:24,0:24:66.14:0,66,669	0/0:30,0:30:81.18:0,81,826	0/0:2,0:2:6.01:0,6,61
chr10	11112816	.	CA	C	3156.82	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=5.200;DP=718;FS=7.178;HRun=5;HaplotypeScore=81.1220;InbreedingCoeff=0.9996;MQ=73.25;MQ0=0;MQRankSum=-0.706;QD=27.94;ReadPosRankSum=-2.592;VQSLOD=2.5078;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,126,1667	0/0:13,0:13:36.09:0,36,473	0/0:19,0:19:30.66:0,31,584	0/0:18,1:18:45.61:0,46,597	0/0:30,0:30:84.25:0,84,1114	0/0:21,0:21:57.19:0,57,779	0/0:23,0:23:60.18:0,60,789	1/1:4,30:34:90.26:1021,90,0	0/0:30,0:30:84.28:0,84,1148	0/0:44,0:44:99:0,120,1602	0/0:16,0:16:45.09:0,45,562	0/0:31,0:31:84.25:0,84,1103	0/0:22,0:22:63.20:0,63,845	0/0:14,0:14:42.14:0,42,575	0/0:23,0:23:69.23:0,69,942	0/0:23,0:23:69.23:0,69,931	0/0:51,0:51:99:0,147,1953	0/0:19,0:19:51.15:0,51,678	1/1:2,19:21:54.15:608,54,0	1/1:4,17:21:51.12:566,51,0	1/1:2,35:37:99:1123,99,0	0/0:20,0:20:57.18:0,57,764	0/0:14,0:13:33.11:0,33,451	0/0:37,0:37:99:0,102,1379	0/0:12,0:12:33.11:0,33,451	0/0:33,0:33:93.31:0,93,1269	0/0:36,0:36:99:0,108,1461	0/0:11,0:11:33.11:0,33,451
chr10	11113095	.	T	TG	6722.29	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-2.138;DP=489;FS=0.808;HRun=1;HaplotypeScore=89.8800;InbreedingCoeff=0.9083;MQ=65.58;MQ0=6;MQRankSum=0.256;QD=14.94;ReadPosRankSum=2.806;VQSLOD=4.6763;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:31,4:35:70.97:466,71,0	1/1:6,0:6:17.92:140,18,0	0/0:22,0:14:16.75:0,17,187	0/0:16,0:12:16.88:0,17,168	1/1:21,0:20:45.21:287,45,0	1/1:9,1:10:21:163,21,0	1/1:20,2:22:28.57:231,29,0	1/1:37,0:37:81.01:700,81,0	1/1:14,0:14:19.75:209,20,0	1/1:27,0:27:66.99:396,67,0	1/1:8,0:7:19.52:126,20,0	1/1:13,0:13:15.33:210,15,0	1/1:15,0:15:21.31:177,21,0	1/1:8,0:8:20.02:131,20,0	1/1:18,0:17:46.48:303,46,0	1/1:21,0:21:51.72:329,52,0	1/1:29,0:30:66.69:474,67,0	1/1:13,0:13:22.65:151,23,0	1/1:18,0:17:47.46:279,47,0	1/1:6,0:6:10.41:78,10,0	1/1:18,0:18:40.40:282,40,0	1/1:6,0:6:17.38:118,17,0	1/1:10,0:9:8.60:142,9,0	1/1:19,0:19:42.76:266,43,0	1/1:13,0:13:32.88:193,33,0	1/1:22,0:21:57.35:364,57,0	1/1:23,0:22:36.86:314,37,0	1/1:13,0:13:33.98:195,34,0
chr10	11113096	.	GT	G	1795.53	PASS	AB=0.827;AC=43;AF=0.768;AN=56;BaseQRankSum=2.632;DP=489;FS=24.277;HRun=17;HaplotypeScore=104.4969;InbreedingCoeff=0.2035;MQ=64.27;MQ0=12;MQRankSum=-1.567;QD=4.26;ReadPosRankSum=0.000;VQSLOD=-0.2951;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,2:35:13.86:0,14,252	1/1:4,2:6:5.81:33,6,0	0/1:21,0:13:7.32:7,0,33	0/1:17,0:12:5.85:6,0,17	1/1:9,10:20:12.89:137,13,0	0/0:12,0:11:5.05:0,5,70	0/0:20,1:21:5.34:0,5,136	0/1:27,1:36:7.12:37,0,7	0/1:13,1:14:17.16:29,0,17	1/1:13,13:27:3.74:171,4,0	1/1:5,3:7:1.72:37,2,0	1/1:12,2:13:9.84:53,10,0	1/1:9,4:13:6.86:84,7,0	1/1:5,3:8:14.45:66,14,0	1/1:15,4:17:7.82:101,8,0	1/1:11,9:21:17.76:136,18,0	1/1:22,6:30:7.12:113,7,0	1/1:13,3:13:14.73:72,15,0	1/1:6,2:17:30.65:111,31,0	1/1:3,1:6:9.76:44,10,0	1/1:11,1:17:17.22:64,17,0	1/1:5,1:6:5.59:31,6,0	0/1:5,5:9:1.56:51,0,2	1/1:12,5:19:10.09:85,10,0	1/1:2,8:12:24.48:128,24,0	1/1:11,8:21:24.23:154,24,0	0/1:14,8:22:15.44:118,0,15	0/1:7,6:13:8.32:82,0,8
chr10	11113207	.	CAG	C	8462.90	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=11.630;DP=513;FS=2.898;HRun=0;HaplotypeScore=66.8709;InbreedingCoeff=0.9940;MQ=67.13;MQ0=2;MQRankSum=-0.861;QD=39.55;ReadPosRankSum=4.775;VQSLOD=6.7319;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,120,2213	1/1:0,5:5:12.04:177,12,0	0/0:20,0:17:39.14:0,39,819	0/0:9,0:6:18.02:0,18,296	0/0:26,0:26:72.23:0,72,1306	0/0:15,0:15:45.15:0,45,835	0/0:23,0:23:57.20:0,57,1067	0/0:22,0:22:66.22:0,66,1208	0/0:13,0:13:39.13:0,39,720	1/1:2,25:27:75.25:1101,75,0	1/1:0,9:9:27.05:367,27,0	0/0:16,0:16:48.14:0,48,836	0/0:21,0:21:63.22:0,63,1162	0/0:9,0:9:27.09:0,27,490	1/1:0,26:26:75.25:1104,75,0	1/1:0,19:19:51.17:751,51,0	1/1:0,18:18:48.16:706,48,0	1/1:2,22:23:60.20:883,60,0	0/0:16,0:16:48.16:0,48,875	0/0:15,0:15:45.14:0,45,802	0/0:31,0:31:84.29:0,84,1572	0/0:11,0:11:30.09:0,30,530	1/1:0,15:15:36.12:530,36,0	1/1:0,19:19:54.18:795,54,0	0/0:10,0:10:27.09:0,27,498	1/1:1,15:16:45.13:635,45,0	1/1:0,26:26:66.22:971,66,0	1/1:0,10:10:30.10:442,30,0
chr10	11113885	.	AT	A	1222.70	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=8.044;DP=539;FS=0.486;HRun=11;HaplotypeScore=61.4134;InbreedingCoeff=0.8665;MQ=74.77;MQ0=0;MQRankSum=0.286;QD=16.09;ReadPosRankSum=2.032;VQSLOD=4.4622;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:28:74.53:0,75,766	0/0:7,0:7:15.04:0,15,160	0/0:14,0:14:10.09:0,10,124	0/1:8,0:8:5.12:5,0,41	0/0:8,0:21:43.18:0,43,246	0/0:23,0:23:48.10:0,48,493	0/0:16,0:16:44.90:0,45,461	0/0:30,2:33:50.35:0,50,702	0/0:21,1:22:35.51:0,36,583	0/0:20,1:21:23.48:0,23,455	0/0:8,0:8:21.05:0,21,224	1/1:2,17:19:47.94:394,48,0	1/1:2,16:18:47.93:394,48,0	1/1:4,17:21:47.91:394,48,0	0/0:24,1:28:35.34:0,35,565	0/0:25,1:26:50.54:0,51,731	0/0:27,3:30:10.27:0,10,719	0/0:22,0:22:54.14:0,54,576	0/0:31,1:32:38.51:0,39,610	0/0:21,0:24:63.29:0,63,631	0/0:13,0:13:33.08:0,33,352	1/1:2,8:10:23.97:197,24,0	0/0:9,0:9:18.05:0,18,192	0/0:19,1:20:26.48:0,26,480	0/0:1,0:15:37.09:0,37,196	0/0:21,0:22:54:0,54,558	0/0:18,1:19:29.40:0,29,455	0/0:10,0:10:27.05:0,27,280
chr10	11115681	.	CT	C	5557.24	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=0.368;DP=491;FS=0.374;HRun=11;HaplotypeScore=59.4561;InbreedingCoeff=0.9930;MQ=77.28;MQ0=0;MQRankSum=-0.148;QD=19.57;ReadPosRankSum=4.841;VQSLOD=5.5225;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:29:61.11:0,61,334	1/1:1,9:10:26.97:222,27,0	0/0:14,0:13:27.12:0,27,269	0/0:15,0:15:26.03:0,26,216	1/1:5,32:37:67.41:692,67,0	0/0:5,0:19:48.84:0,49,282	0/0:2,0:10:25.84:0,26,147	0/0:27,0:27:54.12:0,54,563	0/0:3,0:10:17.25:0,17,104	1/1:5,14:21:48.76:368,49,0	1/1:3,15:19:46.98:375,47,0	0/0:9,0:9:24.02:0,24,244	0/0:6,0:8:20.75:0,21,189	0/0:16,0:16:30.07:0,30,314	1/1:4,23:27:59.92:493,60,0	1/1:1,20:21:59.92:493,60,0	1/1:2,30:33:76.95:622,77,0	1/1:5,23:28:62.91:517,63,0	0/0:13,0:13:33.07:0,33,341	0/0:19,0:19:39.09:0,39,409	0/0:10,0:10:14.47:0,14,272	0/0:7,0:7:18.05:0,18,192	1/1:6,8:14:29.93:243,30,0	1/1:2,8:10:23.96:197,24,0	1/1:0,13:14:40.99:326,41,0	1/1:2,15:17:41.94:345,42,0	1/1:4,20:24:53.92:443,54,0	1/1:0,9:9:26.97:222,27,0
chr10	11115865	.	GA	G	8200.35	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=17.741;DP=601;FS=0.312;HRun=1;HaplotypeScore=79.0400;InbreedingCoeff=0.9993;MQ=70.50;MQ0=0;MQRankSum=-1.754;QD=35.04;ReadPosRankSum=4.641;VQSLOD=4.9158;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:43:99:0,129,1936	1/1:0,9:9:24.08:311,24,0	0/0:17,1:16:34.48:0,34,684	0/0:27,1:26:51.63:0,52,1003	0/0:13,0:13:36.12:0,36,575	0/0:19,0:19:54.18:0,54,851	0/0:33,0:33:99:0,99,1577	0/0:32,0:32:96.32:0,96,1495	0/0:22,0:22:66.19:0,66,993	1/1:0,15:15:45.11:566,45,0	1/1:1,11:12:33.09:412,33,0	0/0:18,0:18:54.18:0,54,826	0/0:18,0:18:54.17:0,54,838	0/0:21,0:21:63.19:0,63,961	1/1:1,18:19:51.17:662,51,0	1/1:0,17:17:51.17:662,51,0	1/1:1,42:43:96.31:1245,96,0	1/1:0,17:17:42.10:527,42,0	0/0:22,0:22:66.17:0,66,1002	0/0:18,0:18:54.18:0,54,863	0/0:41,0:41:99:0,123,1934	0/0:8,0:8:24.08:0,24,384	1/1:0,11:12:33.11:428,33,0	1/1:0,34:34:93.30:1207,93,0	0/0:12,0:12:36.11:0,36,552	1/1:0,20:20:60.20:779,60,0	1/1:0,19:20:60.20:778,60,0	1/1:0,16:16:48.16:623,48,0
chr10	11115999	.	CT	C	4050.54	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=10.048;DP=725;FS=1.688;HRun=3;HaplotypeScore=69.9099;InbreedingCoeff=0.9774;MQ=73.48;MQ0=0;MQRankSum=0.955;QD=31.64;ReadPosRankSum=0.904;VQSLOD=3.7714;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,45:50:99:1486,120,0	0/0:5,0:5:15.05:0,15,216	0/0:22,0:22:53.85:0,54,756	0/0:22,1:23:34.27:0,34,764	0/0:29,0:29:81.18:0,81,1103	1/1:1,20:21:51.16:632,51,0	1/1:0,27:27:69.22:855,69,0	0/0:33,0:33:93.28:0,93,1275	1/1:0,30:30:87.27:1078,87,0	0/0:25,0:25:72.23:0,72,993	0/0:17,0:17:42.11:0,42,550	0/0:34,0:34:99:0,102,1452	0/0:31,0:31:87.28:0,87,1233	0/0:23,0:23:69.23:0,69,993	0/0:32,0:32:96.31:0,96,1363	0/0:36,1:37:68.15:0,68,1364	0/0:34,0:34:99:0,102,1410	0/0:22,0:22:63.15:0,63,861	0/0:22,0:22:63.19:0,63,871	0/0:24,0:24:69.19:0,69,936	0/0:40,0:40:99:0,120,1691	0/0:3,0:3:9.03:0,9,129	0/0:16,0:16:48.14:0,48,653	0/0:42,0:42:99:0,123,1729	0/0:14,0:14:42.14:0,42,604	0/0:30,0:30:78.25:0,78,1090	0/0:33,0:33:93.24:0,93,1246	0/0:6,0:6:18.06:0,18,259
chr10	11116227	.	A	ACT	6219.02	PASS	AB=0.988;AC=34;AF=0.607;AN=56;BaseQRankSum=-11.574;DP=499;FS=3.918;HRun=0;HaplotypeScore=83.6576;InbreedingCoeff=0.2028;MQ=70.01;MQ0=11;MQRankSum=-2.714;QD=15.99;ReadPosRankSum=-7.160;VQSLOD=2.6420;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,17:20:36.07:656,36,0	0/1:9,0:10:11.98:47,0,12	0/0:16,0:15:25.27:0,25,287	0/0:9,0:8:22.18:0,22,200	0/0:17,0:16:3.60:0,4,45	1/1:5,14:19:42.10:737,42,0	1/1:0,9:9:21.07:413,21,0	1/1:11,20:33:81.48:1223,81,0	1/1:4,8:12:24.03:416,24,0	0/1:19,0:18:18.25:37,0,18	0/1:13,0:12:8.18:69,0,8	1/1:1,0:13:14.79:112,15,0	1/1:3,0:17:19.70:183,20,0	1/1:2,0:16:29.48:215,29,0	0/1:14,0:14:20.89:21,0,37	0/1:28,1:28:72.02:105,0,72	0/0:28,0:27:7.37:0,7,122	0/1:32,0:29:49.81:50,0,94	1/1:6,15:20:57.07:864,57,0	1/1:3,19:22:35.81:511,36,0	1/1:0,9:11:9.03:179,9,0	1/1:0,0:5:9:101,9,0	0/1:13,0:13:25.31:25,0,31	0/1:12,0:11:5.41:5,0,30	0/1:18,0:19:11.52:117,0,12	0/1:24,0:24:14.99:132,0,15	0/0:25,0:24:3.28:0,3,81	0/0:14,0:15:18.24:0,18,73
chr10	11116718	.	GCC	G	1843.61	PASS	AB=0.742;AC=32;AF=0.571;AN=56;BaseQRankSum=-0.380;DP=322;FS=26.500;HRun=13;HaplotypeScore=44.4855;InbreedingCoeff=0.2370;MQ=74.05;MQ0=0;MQRankSum=-1.452;QD=7.23;ReadPosRankSum=3.657;VQSLOD=-0.3257;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:10,3:15:38.73:39,0,48	1/1:1,2:3:2.99:29,3,0	0/0:12,0:10:11.58:0,12,107	0/0:7,0:7:5.22:0,5,41	0/0:5,0:6:2.50:0,2,9	0/0:9,0:13:5.46:0,5,28	0/1:8,0:19:1.79:2,0,16	0/1:8,0:10:3.13:3,0,35	0/1:7,1:11:22.45:22,0,41	1/1:5,4:10:14.73:128,15,0	1/1:6,3:10:5.65:41,6,0	0/1:5,3:9:16.79:47,0,17	0/0:9,0:10:1.16:0,1,48	0/0:9,0:12:8.22:0,8,58	1/1:4,7:12:21.01:204,21,0	1/1:4,6:15:15.07:180,15,0	1/1:5,17:25:41.22:356,41,0	1/1:4,13:18:35.78:332,36,0	0/1:7,2:12:17.42:28,0,17	0/1:6,1:7:22.73:23,0,37	0/1:13,1:22:6.59:7,0,139	0/0:3,0:4:2.50:0,2,9	1/1:0,2:2:6.01:58,6,0	1/1:9,14:26:32.42:285,32,0	0/0:2,0:2:3.01:0,3,39	1/1:8,2:10:2.93:29,3,0	1/1:9,6:14:11.88:116,12,0	1/1:1,3:4:9.01:87,9,0
chr10	11117618	.	G	GC	349.24	PASS	AC=10;AF=0.833;AN=12;BaseQRankSum=-1.107;DP=147;FS=9.542;HRun=0;HaplotypeScore=16.7811;MQ=22.82;MQ0=125;MQRankSum=-1.739;QD=11.64;ReadPosRankSum=0.474;VQSLOD=2.4687;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	0/0:8,0:1:2.99:0,3,23	./.	./.	./.	1/1:5,2:2:6.02:94,6,0	./.	./.	./.	1/1:0,2:2:2.94:18,3,0	1/1:3,3:2:6.02:93,6,0	1/1:5,1:1:3.01:45,3,0	./.	./.	./.	./.	1/1:5,4:5:12.04:177,12,0	./.	./.	./.	./.	./.	./.	./.	./.	./.
chr10	11117660	.	TGC	T	1810.68	PASS	AB=0.643;AC=37;AF=0.881;AN=42;BaseQRankSum=-1.683;DP=153;FS=0.000;HRun=0;HaplotypeScore=16.2822;InbreedingCoeff=0.2872;MQ=32.08;MQ0=76;MQRankSum=-1.034;QD=15.48;ReadPosRankSum=0.207;VQSLOD=2.4710;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,4:4:12.04:185,12,0	1/1:0,1:1:3.01:49,3,0	0/0:5,0:1:3.01:0,3,45	0/0:10,0:1:3.01:0,3,36	./.	1/1:0,4:4:6.02:97,6,0	1/1:3,2:2:6.02:97,6,0	1/1:9,6:2:2.97:20,3,0	1/1:2,3:3:6.02:98,6,0	1/1:1,4:4:12.04:195,12,0	1/1:2,3:3:3.01:49,3,0	1/1:0,3:3:6.02:97,6,0	1/1:1,4:3:6.02:97,6,0	1/1:4,3:3:6.02:97,6,0	1/1:2,2:2:3.01:49,3,0	1/1:1,3:3:9.03:147,9,0	0/1:4,5:5:0:0,0,0	1/1:3,5:4:9.03:146,9,0	1/1:5,5:5:12.04:195,12,0	1/1:2,2:2:6.02:98,6,0	1/1:3,1:1:3.01:49,3,0	./.	./.	./.	./.	1/1:6,4:3:9.03:147,9,0	./.	./.
chr10	11128429	.	A	AT	1567.48	PASS	AB=0.786;AC=19;AF=0.339;AN=56;BaseQRankSum=-0.049;DP=357;FS=3.541;HRun=14;HaplotypeScore=134.2389;InbreedingCoeff=0.5742;MQ=55.48;MQ0=2;MQRankSum=-2.765;QD=9.98;ReadPosRankSum=-0.019;VQSLOD=2.0891;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:3,0:18:25.35:0,25,84	0/0:3,0:3:5.89:0,6,38	0/0:18,0:11:12.18:0,12,88	0/0:9,0:6:2.91:0,3,36	0/0:21,0:22:52.56:0,53,326	0/0:4,0:9:10.15:0,10,29	0/0:1,0:5:8.13:0,8,23	0/0:17,0:18:29.46:0,29,191	0/0:2,0:9:10.16:0,10,29	0/1:16,12:28:6.10:319,0,6	1/1:6,2:8:8.97:73,9,0	0/0:11,0:11:14.66:0,15,96	0/0:7,0:8:13.77:0,14,83	0/0:8,0:7:14.71:0,15,96	0/1:7,0:7:8.51:9,0,13	0/1:4,5:9:4.27:91,0,4	0/1:3,7:10:1.26:114,0,1	1/1:5,4:9:12:105,12,0	0/0:20,0:20:40.45:0,40,256	0/0:16,1:17:9.07:0,9,180	0/0:7,0:7:8.79:0,9,58	0/1:8,0:8:10.26:10,0,30	1/1:3,7:10:15:132,15,0	1/1:2,7:9:17.79:138,18,0	0/0:15,0:15:23.42:0,23,154	1/1:10,9:20:10.84:240,11,0	1/1:12,11:23:12.27:338,12,0	1/1:4,6:13:10.39:187,10,0
chr10	11128723	.	CTTTCT	C	2143.94	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=9.962;DP=529;FS=13.459;HRun=0;HaplotypeScore=91.1821;InbreedingCoeff=0.9712;MQ=66.43;MQ0=3;MQRankSum=-7.256;QD=27.14;ReadPosRankSum=2.577;VQSLOD=2.5423;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,29:30:54.12:1041,54,0	0/0:5,0:5:12.04:0,12,261	0/0:31,0:18:10.81:0,11,911	0/0:23,0:16:32.04:0,32,612	0/0:23,0:23:63.22:0,63,1772	1/1:4,13:17:27.09:538,27,0	1/1:5,16:20:14.62:301,15,0	0/0:28,0:28:63.21:0,63,1409	1/1:0,11:10:21.07:422,21,0	0/0:28,0:28:72.25:0,72,2014	0/0:18,0:18:54.18:0,54,1440	0/0:10,0:10:30.09:0,30,829	0/0:9,0:9:27.09:0,27,748	0/0:14,0:14:33.11:0,33,899	0/0:11,0:11:24.08:0,24,577	0/0:14,0:14:33.11:0,33,840	0/0:41,0:41:99:0,111,3140	0/0:22,0:22:57.19:0,57,1526	0/0:16,0:16:42.11:0,42,990	0/0:9,0:10:24.08:0,24,535	0/0:20,0:20:57.19:0,57,1649	0/0:11,0:11:30.10:0,30,830	0/0:8,0:8:21.07:0,21,515	0/0:29,0:29:81.75:0,82,2189	0/0:18,0:18:45.10:0,45,1090	0/0:20,0:20:54.18:0,54,1527	0/0:23,0:23:66.22:0,66,1707	0/0:18,0:18:39.13:0,39,932
chr10	11129922	.	G	GCA	4883.21	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-0.382;DP=307;FS=4.536;HRun=0;HaplotypeScore=177.7718;InbreedingCoeff=0.9257;MQ=45.06;MQ0=0;MQRankSum=-3.128;QD=41.74;ReadPosRankSum=3.464;VQSLOD=5.4157;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:36.12:0,36,503	1/1:0,8:8:24.08:431,24,0	0/0:6,0:6:2:0,2,116	0/0:6,0:6:15:0,15,171	0/0:16,0:16:36.12:0,36,503	0/0:13,0:13:24.08:0,24,336	0/0:13,0:13:24.08:0,24,336	0/0:13,0:13:27.09:0,27,378	0/0:16,0:16:45.11:0,45,607	1/1:1,5:6:18.06:309,18,0	1/1:0,7:7:15.05:269,15,0	0/0:14,0:14:36.12:0,36,503	0/0:7,0:7:15.05:0,15,210	0/0:10,0:10:24.08:0,24,336	1/1:2,15:17:42.14:754,42,0	1/1:0,8:9:27.09:481,27,0	1/1:0,10:10:21.07:377,21,0	1/1:2,4:6:9.03:162,9,0	0/0:11,0:11:27.05:0,27,356	0/0:16,0:16:48.16:0,48,670	0/0:6,0:6:14.80:0,15,191	0/0:10,0:10:21.07:0,21,294	1/1:1,16:17:33.11:591,33,0	1/1:2,9:11:21.07:377,21,0	0/0:14,0:14:42.14:0,42,587	1/1:4,9:13:27.09:485,27,0	1/1:1,11:12:33.11:592,33,0	1/1:0,1:1:3.01:54,3,0
chr10	11129975	.	AT	A	4160.03	PASS	AB=0.956;AC=37;AF=0.661;AN=56;BaseQRankSum=-0.426;DP=427;FS=1.497;HRun=4;HaplotypeScore=126.7855;InbreedingCoeff=-0.0246;MQ=60.63;MQ0=0;MQRankSum=-2.441;QD=10.64;ReadPosRankSum=-0.620;VQSLOD=0.9022;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:33:58.27:58,0,87	1/1:5,6:11:16.69:196,17,0	0/1:15,2:14:48.89:49,0,113	0/0:14,1:11:0.15:0,0,96	0/1:18,0:18:12.54:13,0,40	0/1:13,0:13:12.03:12,0,45	0/1:23,0:23:15.08:15,0,77	0/1:26,3:29:27.74:122,0,28	0/1:11,1:12:30.60:34,0,31	1/1:7,7:13:27.05:297,27,0	1/1:1,12:13:24.07:284,24,0	0/1:15,2:17:25.24:84,0,25	0/1:12,1:13:22.99:23,0,25	0/0:11,0:11:10.53:0,11,43	1/1:0,15:15:24.07:280,24,0	1/1:0,9:9:21.06:245,21,0	1/1:4,10:14:30.04:337,30,0	1/1:1,7:8:24.03:269,24,0	0/1:8,0:8:5.37:37,0,5	0/1:21,0:21:34.18:52,0,34	0/1:11,1:12:14.34:80,0,14	0/0:10,0:10:14.56:0,15,51	1/1:5,11:16:39.02:427,39,0	1/1:6,13:19:32.96:354,33,0	0/1:19,1:20:0.37:0,0,39	1/1:6,10:16:41.99:442,42,0	1/1:7,9:16:32.97:333,33,0	1/1:2,2:4:12:117,12,0
chr10	11131054	.	T	TATAA	273.35	PASS	AC=6;AF=0.75;AN=8;BaseQRankSum=0.742;DP=64;FS=0.000;HRun=0;HaplotypeScore=23.8142;MQ=61.90;MQ0=5;MQRankSum=0.742;QD=10.93;ReadPosRankSum=0.742;VQSLOD=1.9289;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,2:10:6.02:112,6,0	./.	./.	./.	./.	1/1:4,4:9:9.03:182,9,0	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	1/1:6,0:5:3.01:52,3,0	./.	./.	0/0:1,0:1:3.01:0,3,47	./.	./.	./.	./.	./.	./.
chr10	11131482	.	GT	G	1175.37	PASS	AB=0.740;AC=12;AF=0.214;AN=56;BaseQRankSum=-6.107;DP=503;FS=8.723;HRun=12;HaplotypeScore=111.7501;InbreedingCoeff=0.7943;MQ=69.02;MQ0=3;MQRankSum=2.483;QD=10.22;ReadPosRankSum=-2.204;VQSLOD=1.8503;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,1:40:72.76:0,73,896	0/0:9,0:9:18.75:0,19,78	0/0:32,0:16:0.27:0,0,121	0/0:37,0:16:9.61:0,10,93	0/1:4,11:16:1.55:163,0,2	0/1:16,2:20:5.69:6,0,355	0/0:19,0:19:54.08:0,54,536	1/1:9,15:25:46.81:352,47,0	0/0:11,0:12:26.97:0,27,261	0/0:21,0:21:38.67:0,39,153	0/0:15,0:14:29.30:0,29,120	0/0:15,0:17:35.84:0,36,330	0/0:14,0:14:39.07:0,39,391	0/0:17,0:17:21.89:0,22,398	0/0:11,0:11:24.11:0,24,100	0/0:11,0:11:24.83:0,25,99	0/0:21,0:22:49.33:0,49,209	0/0:21,0:21:53.24:0,53,218	1/1:9,12:22:31.73:269,32,0	1/1:2,9:11:26.87:209,27,0	1/1:1,7:9:19.97:145,20,0	0/0:8,0:8:16.82:0,17,147	0/0:12,0:12:22.81:0,23,98	0/0:17,0:17:32.94:0,33,134	1/1:2,10:12:26.89:209,27,0	0/0:16,0:16:40.18:0,40,164	0/0:24,0:24:48.21:0,48,199	0/0:10,0:10:24.11:0,24,99
chr10	11131487	.	T	TG	6269.89	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=14.162;DP=496;FS=16.838;HRun=0;HaplotypeScore=93.1932;InbreedingCoeff=0.9816;MQ=67.98;MQ0=3;MQRankSum=-1.433;QD=32.83;ReadPosRankSum=4.759;VQSLOD=3.3794;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,101,1329	1/1:0,8:8:21.07:277,21,0	0/0:34,0:16:20.06:0,20,259	0/0:36,0:14:5.62:0,6,105	0/0:16,0:16:41.74:0,42,323	0/0:22,0:22:48.29:0,48,626	0/0:19,0:19:57.17:0,57,762	0/0:23,0:23:65.52:0,66,495	0/0:11,0:11:26.01:0,26,379	1/1:1,17:18:37.51:632,38,0	1/1:0,16:15:33.09:436,33,0	0/0:15,0:15:41.34:0,41,514	0/0:14,0:14:42.12:0,42,555	0/0:17,0:17:51.10:0,51,635	1/1:0,10:10:27.09:357,27,0	1/1:0,10:10:30.10:395,30,0	1/1:1,22:23:60.19:780,60,0	1/1:0,22:22:60.20:795,60,0	0/0:20,0:20:53.76:0,54,420	0/0:11,0:11:32.77:0,33,246	0/0:10,0:10:23.87:0,24,180	0/0:8,0:8:24.01:0,24,267	1/1:0,12:12:30.10:392,30,0	1/1:0,18:18:39.12:512,39,0	0/0:10,0:10:26.85:0,27,199	1/1:1,16:17:48.13:622,48,0	1/1:1,24:25:54.16:713,54,0	1/1:2,10:12:27.05:358,27,0
chr10	11131973	.	T	TAA	5647.45	PASS	AB=0.545;AC=39;AF=0.696;AN=56;BaseQRankSum=-1.692;DP=511;FS=3.577;HRun=15;HaplotypeScore=94.3062;InbreedingCoeff=0.8266;MQ=71.24;MQ0=0;MQRankSum=0.024;QD=15.86;ReadPosRankSum=0.351;VQSLOD=4.1442;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:24:25.27:0,25,283	1/1:2,4:9:22.73:207,23,0	0/0:25,0:15:16.08:0,16,107	0/0:14,0:9:6.31:0,6,47	0/0:22,0:24:47:0,47,349	0/0:19,0:23:31.40:0,31,326	0/0:14,0:14:29.70:0,30,234	1/1:11,9:17:3.19:251,3,0	0/0:14,0:14:26.55:0,27,210	1/1:9,14:26:40.82:456,41,0	1/1:6,10:17:30.04:351,30,0	1/1:7,2:15:30.45:174,30,0	1/1:5,1:12:0.10:116,0,0	1/1:3,0:9:9.49:34,9,0	1/1:2,8:12:23.43:264,23,0	0/1:2,7:12:0.97:185,0,1	1/1:3,22:31:50.98:527,51,0	1/1:4,14:19:28:317,28,0	1/1:7,6:14:20.40:210,20,0	1/1:8,15:25:28.34:509,28,0	1/1:3,2:5:6:61,6,0	1/1:4,0:19:7.70:78,8,0	1/1:4,9:16:23.29:246,23,0	1/1:0,8:9:17.18:198,17,0	0/0:14,0:17:22.39:0,22,265	1/1:13,20:37:52.84:593,53,0	1/1:7,16:27:31.19:330,31,0	1/1:0,12:17:47.49:540,47,0
chr10	11132071	.	A	AGAAG	10148.04	PASS	AB=1.000;AC=50;AF=0.893;AN=56;BaseQRankSum=-0.587;DP=560;FS=1.407;HRun=0;HaplotypeScore=110.8299;InbreedingCoeff=0.5266;MQ=57.67;MQ0=2;MQRankSum=-0.687;QD=18.79;ReadPosRankSum=-0.383;VQSLOD=4.1579;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,27:31:37.01:889,37,0	1/1:10,0:10:20.79:200,21,0	0/0:11,0:4:2.84:0,3,14	0/0:9,0:8:9.03:0,9,148	1/1:14,0:13:11.87:121,12,0	1/1:5,20:25:27.09:666,27,0	1/1:9,15:26:18.06:444,18,0	1/1:31,0:30:19.19:252,19,0	1/1:4,13:18:15.05:370,15,0	0/1:18,0:18:0.49:204,0,0	1/1:15,0:14:23.20:220,23,0	1/1:4,22:26:30.10:723,30,0	1/1:6,18:25:15.05:370,15,0	1/1:0,11:11:15.05:370,15,0	1/1:23,0:23:35.50:419,35,0	1/1:20,0:20:36.89:473,37,0	1/1:24,0:23:19.36:230,19,0	1/1:26,0:26:47.29:648,47,0	1/1:3,3:20:40.21:433,40,0	1/1:4,0:17:14.87:161,15,0	1/1:20,0:22:24.38:229,24,0	1/1:3,11:14:23.99:323,24,0	0/1:12,0:12:11.65:80,0,12	1/1:22,0:22:22.26:228,22,0	1/1:25,0:24:60.20:793,60,0	1/1:34,0:34:59.25:886,59,0	1/1:21,0:18:11.23:235,11,0	1/1:9,0:7:11.96:182,12,0
chr10	11132079	.	G	GGAAGGAAGGAAGGAAA	3411.43	PASS	AB=0.997;AC=21;AF=0.375;AN=56;BaseQRankSum=-6.869;DP=582;FS=32.567;HRun=0;HaplotypeScore=258.5760;InbreedingCoeff=-0.3115;MQ=54.87;MQ0=4;MQRankSum=-1.695;QD=8.72;ReadPosRankSum=1.995;VQSLOD=1.5136;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:44.38:0,44,445	0/1:9,0:9:14.72:94,0,15	0/0:11,0:2:2.80:0,3,13	0/0:11,0:8:8.17:0,8,169	1/1:7,8:18:11.68:104,12,0	0/0:25,0:25:23.22:0,23,211	0/1:25,0:25:31.08:31,0,190	0/1:30,0:29:61.25:61,0,65	0/0:16,0:16:15.03:0,15,155	0/1:18,0:18:30.73:31,0,120	0/1:18,0:17:30.52:228,0,31	0/1:26,0:26:49.94:50,0,209	0/0:24,0:24:21.03:0,21,205	0/0:14,0:14:16.27:0,16,152	0/1:21,0:21:58.75:59,0,219	0/1:21,0:21:17.10:17,0,218	0/0:25,0:24:9.74:0,10,232	0/1:33,0:33:99:177,0,293	0/1:23,0:21:12.57:391,0,13	0/1:18,0:17:26.54:91,0,27	0/1:21,0:22:81.75:152,0,82	0/1:16,0:16:93.08:145,0,93	0/1:13,0:13:30.58:31,0,102	0/1:22,0:22:53.37:109,0,53	1/1:26,0:25:31.27:1623,31,0	0/0:31,0:31:25.94:0,26,644	0/1:21,0:18:11.26:11,0,86	0/1:10,0:8:7.51:8,0,118
chr10	11132090	.	A	AGG	1176.78	PASS	AB=0.907;AC=19;AF=0.339;AN=56;BaseQRankSum=1.451;DP=551;FS=0.415;HRun=0;HaplotypeScore=134.8151;InbreedingCoeff=-0.5243;MQ=53.61;MQ0=4;MQRankSum=-0.369;QD=2.96;ReadPosRankSum=11.255;VQSLOD=0.7204;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:33:99:136,0,235	0/1:9,2:11:22.30:22,0,150	0/0:10,0:4:9.02:0,9,116	0/0:9,0:6:18.05:0,18,272	0/0:15,0:14:11.88:0,12,103	0/1:21,0:21:64.69:112,0,65	0/1:24,0:24:64.30:64,0,298	0/0:29,0:28:74.48:0,74,730	0/1:16,0:16:28.66:62,0,29	0/1:15,2:17:38.98:39,0,144	0/1:14,3:16:6.34:6,0,170	0/1:25,0:25:99:104,0,148	0/1:23,0:23:53.52:54,0,166	0/1:14,0:14:53.47:53,0,167	0/1:16,3:19:54.16:54,0,206	0/1:13,4:17:87.05:87,0,126	0/1:21,2:23:6.63:7,0,324	0/1:29,4:33:99:102,0,300	0/1:16,0:14:39.28:39,0,287	0/0:15,0:14:1.11:0,1,284	0/0:29,0:29:61.50:0,61,895	0/0:13,0:13:15.76:0,16,273	0/0:7,3:10:29.28:0,29,223	0/1:24,2:26:21.94:22,0,295	0/0:24,0:23:46.53:0,47,266	0/1:24,10:34:99:215,0,275	0/1:12,6:15:27.43:91,0,27	0/1:6,4:8:43.14:63,0,43
chr10	11132091	.	A	AAG	624.44	PASS	AB=0.832;AC=12;AF=0.214;AN=56;BaseQRankSum=5.579;DP=553;FS=1.845;HRun=0;HaplotypeScore=140.3494;InbreedingCoeff=-0.2759;MQ=53.47;MQ0=4;MQRankSum=-3.222;QD=2.59;ReadPosRankSum=4.121;VQSLOD=2.5805;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:56.23:0,56,451	0/1:9,0:11:26.47:26,0,114	0/0:10,0:4:9.02:0,9,107	0/0:9,0:6:11.22:0,11,237	0/1:14,0:14:7.02:7,0,100	0/0:21,0:21:30.97:0,31,210	0/0:24,0:24:36.40:0,36,422	0/0:29,0:28:77.89:0,78,902	0/0:16,0:16:19.77:0,20,113	0/1:14,2:16:65.71:66,0,134	0/1:14,0:16:31.61:32,0,174	0/0:26,0:26:40.15:0,40,267	0/0:23,0:23:26.20:0,26,241	0/0:14,0:14:26.02:0,26,260	0/1:16,3:19:29.28:29,0,224	0/1:12,4:16:66.37:66,0,129	0/1:23,2:25:39.20:39,0,308	0/1:29,4:33:99:100,0,323	0/0:16,0:14:35.51:0,36,401	0/0:15,0:14:31.11:0,31,338	0/0:29,0:29:74.67:0,75,1036	0/0:13,0:13:32.89:0,33,373	0/0:7,3:10:4.43:0,4,181	0/1:23,2:25:6.47:6,0,306	0/0:24,0:23:68.35:0,68,485	0/1:24,10:34:99:269,0,256	0/1:3,7:16:46.24:68,0,46	0/1:7,4:9:62.22:63,0,62
chr10	11133028	.	T	TGC	2561.37	PASS	AB=0.675;AC=14;AF=0.259;AN=54;BaseQRankSum=10.623;DP=663;FS=2.070;HRun=0;HaplotypeScore=171.6305;InbreedingCoeff=0.4362;MQ=54.98;MQ0=6;MQRankSum=-10.518;QD=13.34;ReadPosRankSum=-2.284;VQSLOD=3.2553;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:30.07:0,30,751	./.	0/0:33,0:14:39.13:0,39,590	0/0:48,0:28:77.69:0,78,1004	0/0:24,0:24:48.16:0,48,732	0/0:19,0:19:25.22:0,25,471	0/0:28,0:28:16.88:0,17,520	0/0:26,0:26:66.21:0,66,983	0/0:21,0:21:23.85:0,24,546	1/1:9,18:24:21.71:742,22,0	1/1:8,5:13:3.01:57,3,0	0/0:33,0:33:93.29:0,93,1379	0/0:28,0:28:84.25:0,84,1240	0/0:26,0:26:78.26:0,78,1191	0/1:13,15:24:10.06:137,0,10	1/1:10,9:19:9.03:154,9,0	0/1:6,11:18:6.29:161,0,6	0/1:5,9:14:34.77:308,0,35	0/0:20,0:20:57.16:0,57,823	0/0:16,0:16:39.13:0,39,595	0/0:64,0:64:99:0,175,2595	0/0:17,0:17:51.17:0,51,778	0/0:5,4:8:1.75:0,2,20	0/1:10,9:19:0:0,0,0	0/0:15,0:15:32.94:0,33,481	0/1:10,12:21:33.56:623,0,34	0/1:16,3:18:18.15:162,0,18	1/1:3,10:13:23.01:380,23,0
chr10	11133043	.	GCA	G	1736.68	PASS	AB=0.914;AC=22;AF=0.423;AN=52;BaseQRankSum=9.851;DP=612;FS=7.916;HRun=0;HaplotypeScore=149.2336;InbreedingCoeff=0.6785;MQ=48.45;MQ0=10;MQRankSum=-8.728;QD=7.18;ReadPosRankSum=-2.116;VQSLOD=2.6128;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:4.38:0,4,397	./.	0/1:27,1:11:16.30:16,0,358	0/1:40,5:22:3.19:3,0,658	0/0:24,0:24:42.19:0,42,466	0/0:20,0:20:35.56:0,36,421	0/0:28,2:30:40.32:0,40,439	0/0:29,0:28:70.09:0,70,774	0/1:19,0:19:19.38:19,0,403	1/1:11,10:18:45.86:433,46,0	./.	0/0:32,0:32:66.81:0,67,1750	0/0:27,0:27:78.01:0,78,1339	0/0:27,0:27:80.53:0,81,1386	1/1:12,10:18:8.84:82,9,0	1/1:3,10:13:3.01:31,3,0	1/1:12,5:17:19.76:234,20,0	1/1:8,3:11:24.95:202,25,0	0/0:18,0:17:47.58:0,48,625	0/0:14,0:14:25.54:0,26,156	0/0:60,1:61:99:0,136,1398	0/0:21,0:21:20.56:0,21,1070	1/1:3,4:6:5.96:44,6,0	0/1:11,4:15:0.02:0,0,0	0/0:15,0:16:27.04:0,27,363	1/1:10,11:20:56.14:585,56,0	1/1:8,3:10:9.37:75,9,0	1/1:5,6:11:22.19:201,22,0
chr10	11133045	.	A	ATGTGTG	2264.53	PASS	AB=1.000;AC=31;AF=0.574;AN=54;BaseQRankSum=4.965;DP=623;FS=9.523;HRun=0;HaplotypeScore=183.4505;InbreedingCoeff=0.7012;MQ=48.83;MQ0=10;MQRankSum=-7.878;QD=6.60;ReadPosRankSum=-2.661;VQSLOD=0.7970;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:8,27:38:6.24:132,6,0	./.	0/0:28,0:11:8.35:0,8,130	0/1:47,0:23:14.58:15,0,357	0/0:5,0:25:30.34:0,30,411	1/1:4,16:21:12.04:396,12,0	1/1:10,22:33:2.87:99,3,0	0/0:11,0:30:26.80:0,27,288	1/1:4,15:20:29.56:736,30,0	1/1:22,0:19:10.72:174,11,0	0/1:11,0:11:0:0,0,0	0/0:32,0:32:52.29:0,52,1504	0/0:23,0:24:54.18:0,54,1051	0/0:26,0:27:64.07:0,64,1232	1/1:23,0:19:5.92:42,6,0	1/1:13,0:13:2.96:19,3,0	1/1:17,0:17:18.83:187,19,0	1/1:11,0:11:19:122,19,0	0/1:14,0:18:1.14:1,0,110	0/0:4,0:14:30.09:0,30,399	0/0:25,0:58:72.22:0,72,978	0/0:21,0:21:38.42:0,38,1049	1/1:8,0:7:5.84:34,6,0	1/1:16,0:16:2.95:23,3,0	0/0:5,0:17:14.60:0,15,209	1/1:22,0:21:26.97:272,27,0	1/1:11,0:10:5.93:42,6,0	1/1:11,0:11:20.86:166,21,0
chr10	11133372	.	TG	T	5501.33	PASS	AB=0.917;AC=29;AF=0.518;AN=56;BaseQRankSum=5.553;DP=597;FS=25.347;HRun=10;HaplotypeScore=83.3122;InbreedingCoeff=0.5825;MQ=78.11;MQ0=0;MQRankSum=-1.508;QD=13.29;ReadPosRankSum=6.338;VQSLOD=2.7963;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:37,6:43:98.09:98,0,437	1/1:3,7:10:23.98:207,24,0	0/1:16,1:16:8.82:9,0,127	0/0:14,1:16:21.83:0,22,193	0/0:9,0:12:8.52:0,9,43	0/0:20,0:20:45.10:0,45,483	0/1:22,3:25:30.03:30,0,375	0/0:17,0:20:12.11:0,12,90	0/1:18,2:20:42.03:42,0,242	1/1:5,13:17:44.93:379,45,0	1/1:5,7:12:20.98:182,21,0	0/0:21,0:21:14.28:0,14,355	0/1:24,1:25:18.99:19,0,247	0/0:13,0:13:27.06:0,27,291	1/1:9,38:48:99:995,116,0	1/1:9,23:32:71.96:625,72,0	1/1:11,25:36:74.55:635,75,0	1/1:4,15:22:51.06:401,51,0	0/0:19,1:19:1.02:0,1,239	0/0:7,0:7:6.82:0,7,52	0/0:12,0:20:12.89:0,13,79	0/0:18,0:18:24.06:0,24,265	1/1:5,8:14:23.03:188,23,0	1/1:5,31:36:71.01:605,71,0	0/0:11,0:16:14.49:0,14,101	1/1:9,12:22:37.99:313,38,0	1/1:2,21:26:72.09:591,72,0	1/1:1,7:8:20.99:182,21,0
chr10	11133881	.	G	GAA	1283.06	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-5.174;DP=514;FS=0.660;HRun=9;HaplotypeScore=64.1218;InbreedingCoeff=0.9847;MQ=65.78;MQ0=0;MQRankSum=2.032;QD=29.84;ReadPosRankSum=0.232;VQSLOD=3.6699;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,102,1066	0/0:14,0:14:42.09:0,42,439	0/0:19,0:12:23.96:0,24,243	0/0:10,0:8:20.99:0,21,205	1/1:5,20:26:63.06:900,63,0	0/0:24,0:24:71.90:0,72,745	0/0:13,0:13:30.05:0,30,319	0/0:29,0:29:69.14:0,69,730	0/0:12,0:12:36.09:0,36,383	0/0:20,0:21:45.01:0,45,526	0/0:16,0:16:45.08:0,45,468	0/0:19,0:19:45.07:0,45,462	0/0:11,0:11:30.06:0,30,319	0/0:10,0:10:18.01:0,18,192	0/0:23,0:23:63.14:0,63,662	0/0:20,0:20:51.09:0,51,535	0/0:25,0:25:60.09:0,60,627	0/0:21,0:21:48.05:0,48,492	0/0:19,0:19:45.09:0,45,478	0/0:18,0:18:48.12:0,48,509	0/0:11,0:13:17.95:0,18,294	0/0:8,0:8:21.05:0,21,224	0/0:11,0:11:33.07:0,33,343	0/0:12,0:12:30.07:0,30,319	1/1:4,13:17:33.11:504,33,0	0/0:26,0:26:75.17:0,75,790	0/0:27,0:27:78.19:0,78,829	0/0:9,0:9:27.07:0,27,287
chr10	11135669	.	CGT	C	841	PASS	AB=0.906;AC=23;AF=0.479;AN=48;BaseQRankSum=3.582;DP=621;FS=10.708;HRun=0;HaplotypeScore=82.7779;InbreedingCoeff=-0.0493;MQ=72.61;MQ0=7;MQRankSum=1.123;QD=2.27;ReadPosRankSum=4.360;VQSLOD=0.2785;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:28,2:30:26.20:26,0,36	1/1:7,1:9:5.85:46,6,0	./.	./.	0/1:14,1:15:23.24:23,0,52	0/0:14,0:14:9.03:0,9,130	0/1:20,1:22:22.35:22,0,173	0/0:25,0:25:1.25:0,1,3	0/1:16,2:18:23.22:23,0,50	0/1:16,0:19:4.85:5,0,157	0/0:17,0:19:12:0,12,119	1/1:19,3:22:6.01:64,6,0	1/1:13,1:14:6.01:64,6,0	./.	0/1:33,6:41:28.39:78,0,28	1/1:16,6:23:17.87:175,18,0	0/1:28,9:38:14.55:223,0,15	0/1:24,3:26:74.98:78,0,75	0/0:26,0:26:6.01:0,6,68	0/0:16,0:16:3:0,3,26	0/0:44,0:44:21:0,21,210	0/0:22,0:22:18.01:0,18,199	1/1:14,3:17:2.86:32,3,0	1/1:24,2:27:8.85:78,9,0	0/1:6,1:7:26.67:27,0,31	0/1:19,0:21:4.41:4,0,63	0/1:20,1:21:23.21:23,0,72	./.
chr10	11135730	.	CCTGGTCCAT	C	1431.65	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.502;DP=529;FS=4.683;HRun=0;HaplotypeScore=147.2942;InbreedingCoeff=0.9502;MQ=89.65;MQ0=4;MQRankSum=-6.507;QD=44.74;ReadPosRankSum=-4.025;VQSLOD=2.2309;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:72.25:0,72,3374	0/0:5,0:5:12.04:0,12,519	0/0:43,0:36:99:0,100,4082	0/0:42,0:30:75.26:0,75,3187	1/1:3,15:18:26.94:706,27,0	0/0:19,0:19:57.19:0,57,2629	0/0:24,0:24:69.24:0,69,3304	0/0:19,0:19:57.20:0,57,2663	0/0:13,0:13:36.11:0,36,1583	0/0:16,0:16:45.10:0,45,2190	0/0:10,0:10:27.09:0,27,1267	0/0:13,0:13:39.12:0,39,1730	0/0:14,0:14:36.12:0,36,1554	0/0:17,0:17:51.18:0,51,2304	0/0:24,0:24:72.25:0,72,3460	0/0:31,0:31:90.31:0,90,4166	0/0:24,0:24:72.25:0,72,3263	0/0:18,0:18:54.13:0,54,2217	0/0:11,0:11:30.10:0,30,1316	0/0:10,0:10:30.10:0,30,1440	0/0:28,0:28:75.24:0,75,3525	0/0:20,0:20:60.21:0,60,2780	0/0:19,0:19:54.19:0,54,2625	0/0:17,0:17:51.18:0,51,2477	1/1:2,12:14:30.06:847,30,0	0/0:26,0:26:72.24:0,72,3130	0/0:7,0:7:18.06:0,18,874	0/0:3,0:3:9.03:0,9,438
chr10	11136885	.	CAAGA	C	2147.48	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.553;DP=539;FS=0.648;HRun=0;HaplotypeScore=102.7427;InbreedingCoeff=0.9965;MQ=79.87;MQ0=0;MQRankSum=-0.494;QD=42.95;ReadPosRankSum=1.708;VQSLOD=3.9067;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,141,3789	0/0:13,0:13:39.13:0,39,1053	0/0:18,0:18:54.14:0,54,1335	0/0:15,0:16:40.73:0,41,1044	1/1:0,24:24:48.16:902,48,0	0/0:18,0:18:54.19:0,54,1430	0/0:16,0:16:45.15:0,45,1215	0/0:28,0:28:78.26:0,78,2049	0/0:11,0:11:33.11:0,33,891	0/0:25,0:25:72.25:0,72,1932	0/0:24,0:24:72.25:0,72,1925	0/0:9,0:9:24.08:0,24,647	0/0:14,0:14:39.12:0,39,997	0/0:14,0:14:42.14:0,42,1121	0/0:36,0:36:99:0,99,2616	0/0:16,0:16:45.15:0,45,1210	0/0:28,0:28:84.29:0,84,2232	0/0:23,0:23:63.22:0,63,1702	0/0:11,0:11:30.10:0,30,810	0/0:20,0:20:57.18:0,57,1479	0/0:20,0:20:57.20:0,57,1539	0/0:11,0:11:33.11:0,33,891	0/0:9,0:9:27.09:0,27,726	0/0:12,0:12:30.10:0,30,770	1/1:0,26:25:72.25:1367,72,0	0/0:26,0:26:78.27:0,78,2103	0/0:16,0:16:45.15:0,45,1191	0/0:8,0:8:24.08:0,24,648
chr10	11138612	.	AGAG	A	1490.85	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.920;DP=663;FS=10.983;HRun=0;HaplotypeScore=95.8798;InbreedingCoeff=0.9988;MQ=84.37;MQ0=0;MQRankSum=-1.612;QD=33.13;ReadPosRankSum=0.971;VQSLOD=3.4045;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,105,2264	0/0:10,0:10:24.08:0,24,525	0/0:24,0:24:63.20:0,63,1278	0/0:29,0:29:56.62:0,57,1420	1/1:1,20:21:54.18:853,54,0	0/0:23,0:23:66.23:0,66,1432	0/0:23,0:23:66.23:0,66,1443	0/0:23,0:23:57.20:0,57,1199	0/0:18,0:18:54.19:0,54,1149	0/0:18,0:18:45.14:0,45,905	0/0:15,0:15:42.14:0,42,913	0/0:29,0:29:81.28:0,81,1754	0/0:19,0:19:57.20:0,57,1233	0/0:21,0:21:63.17:0,63,1330	0/0:41,0:41:99:0,114,2484	0/0:25,0:25:66.23:0,66,1414	0/0:34,0:34:99:0,99,2159	0/0:24,0:24:66.23:0,66,1416	0/0:23,0:23:60.21:0,60,1264	0/0:22,0:22:56.68:0,57,1245	0/0:36,0:36:99:0,105,2274	0/0:14,0:14:36.11:0,36,747	0/0:15,0:15:42.13:0,42,874	0/0:25,0:25:66.23:0,66,1415	1/1:4,20:24:48.16:760,48,0	0/0:33,0:33:96.33:0,96,2070	0/0:21,0:20:54.17:0,54,1136	0/0:14,0:14:42.14:0,42,875
chr10	11140691	.	A	AAAG	2591.62	PASS	AB=0.823;AC=23;AF=0.411;AN=56;BaseQRankSum=-1.538;DP=542;FS=19.048;HRun=0;HaplotypeScore=101.9150;InbreedingCoeff=0.6480;MQ=53.62;MQ0=24;MQRankSum=1.442;QD=8.82;ReadPosRankSum=5.047;VQSLOD=1.1987;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:25:37.42:0,37,321	1/1:1,2:4:5.95:81,6,0	0/0:23,0:9:12.78:0,13,96	0/0:18,0:9:17.86:0,18,162	0/0:18,0:16:23.88:0,24,190	0/0:29,0:27:31.69:0,32,346	0/0:26,0:25:45.02:0,45,321	0/1:27,0:25:1.19:1,0,201	0/0:17,0:17:25.97:0,26,167	1/1:6,15:23:37.55:439,38,0	1/1:19,1:22:20.17:216,20,0	0/0:12,0:13:24.27:0,24,209	0/0:10,0:10:14.84:0,15,133	0/0:12,0:12:17.77:0,18,132	0/1:7,9:19:2.80:135,0,3	0/1:22,2:22:16.85:144,0,17	1/1:10,2:21:24.88:276,25,0	0/1:12,0:25:11.81:178,0,12	0/0:16,0:16:17.02:0,17,147	0/1:15,0:14:13.20:13,0,28	0/0:18,0:18:16.72:0,17,122	0/0:6,0:6:14.99:0,15,130	1/1:14,1:14:18.93:274,19,0	1/1:8,8:18:10.76:158,11,0	0/0:14,0:14:21.47:0,21,144	1/1:12,17:33:45.80:519,46,0	1/1:8,12:22:15.94:220,16,0	1/1:6,7:11:8.57:140,9,0
chr10	11141468	.	TAC	T	3161.83	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=7.280;DP=556;FS=0.000;HRun=0;HaplotypeScore=75.0097;InbreedingCoeff=0.9688;MQ=60.76;MQ0=2;MQRankSum=0.736;QD=27.49;ReadPosRankSum=-1.643;VQSLOD=3.9538;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:78.23:0,78,1269	0/0:5,0:5:12.04:0,12,205	0/0:16,0:14:29.48:0,29,475	0/0:8,0:6:8.50:0,9,55	0/0:37,0:37:62.27:0,62,1304	0/0:18,0:18:45.15:0,45,771	0/0:20,0:20:57.19:0,57,966	1/1:5,38:43:99:1350,105,0	0/0:20,0:20:54.18:0,54,916	0/0:20,0:20:54.18:0,54,910	0/0:11,0:11:21.06:0,21,328	0/0:23,0:23:66.21:0,66,1088	0/0:21,0:21:60.15:0,60,943	0/0:16,0:16:45.15:0,45,760	0/0:17,0:17:45.13:0,45,733	0/0:18,0:18:48.16:0,48,821	0/0:20,0:20:54.10:0,54,885	0/0:21,0:20:54.18:0,54,925	1/1:2,19:20:51.08:633,51,0	1/1:1,24:25:48.16:630,48,0	1/1:2,24:26:54.18:709,54,0	0/0:12,0:12:21.06:0,21,333	0/0:9,0:9:18.06:0,18,308	0/0:20,0:19:54.12:0,54,841	0/0:29,0:29:69.24:0,69,1160	0/0:23,0:23:60.18:0,60,953	0/0:16,0:16:48.13:0,48,762	0/0:12,0:12:24.02:0,24,326
chr10	11141593	.	TTC	T	149.04	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-0.582;DP=355;FS=5.935;HRun=0;HaplotypeScore=47.1612;InbreedingCoeff=0.7426;MQ=58.80;MQ0=7;MQRankSum=0.722;QD=7.84;ReadPosRankSum=-0.714;VQSLOD=2.2167;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:58.95:0,59,420	0/0:4,0:2:6.02:0,6,85	0/0:8,0:3:6.38:0,6,47	0/0:7,0:4:8.95:0,9,77	1/1:5,6:10:8.44:75,8,0	0/0:12,0:12:20.62:0,21,168	0/0:21,0:19:30.17:0,30,242	0/0:27,0:27:66.53:0,67,463	0/0:13,0:13:20.77:0,21,179	0/0:6,0:5:12.55:0,13,97	0/0:7,0:7:16.22:0,16,144	0/0:18,0:17:16.63:0,17,341	0/0:13,0:13:32.40:0,32,243	0/0:10,0:10:23.68:0,24,191	0/0:6,0:6:6:0,6,52	0/0:10,0:10:29.51:0,30,336	0/0:14,0:14:27.64:0,28,256	0/0:24,0:22:20.60:0,21,386	0/0:19,0:17:19.25:0,19,211	0/0:13,0:12:18.29:0,18,147	0/0:10,0:10:11.88:0,12,83	0/0:7,0:7:16.17:0,16,150	0/0:6,0:6:13.22:0,13,132	0/0:7,0:7:16.68:0,17,135	1/1:8,0:8:23.89:186,24,0	0/0:13,0:10:22.04:0,22,218	0/0:16,0:15:41.76:0,42,409	0/0:12,0:10:24.04:0,24,313
chr10	11141756	.	TTTC	T	1582.43	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=0.771;DP=313;FS=8.915;HRun=0;HaplotypeScore=45.6435;InbreedingCoeff=0.4978;MQ=59.82;MQ0=8;MQRankSum=2.061;QD=15.82;ReadPosRankSum=-3.282;VQSLOD=1.0530;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:60.07:0,60,971	0/0:3,0:3:2.30:0,2,29	0/0:17,0:9:14.92:0,15,133	0/0:10,0:8:14.96:0,15,181	1/1:2,19:21:47.89:581,48,0	0/0:18,0:18:54.02:0,54,829	0/0:12,0:11:33:0,33,527	0/0:29,0:23:60.04:0,60,795	0/0:16,0:16:41.83:0,42,719	0/1:6,0:5:6.03:20,0,6	1/1:4,0:3:8.96:73,9,0	0/0:10,0:10:20.32:0,20,187	0/0:12,0:12:30.83:0,31,247	0/0:10,0:10:21.84:0,22,191	1/1:2,0:2:5.94:41,6,0	1/1:1,0:1:3:27,3,0	1/1:8,0:7:11.97:97,12,0	1/1:5,0:3:8.97:72,9,0	0/0:19,0:15:38.82:0,39,410	0/0:11,0:11:26.64:0,27,291	0/0:7,0:7:13.41:0,13,252	0/0:7,0:6:12.01:0,12,120	0/1:7,0:6:26.57:66,0,27	0/0:0,0:3:2.64:0,3,11	1/1:17,8:23:52.04:683,52,0	0/1:11,0:11:79:79,0,87	0/1:4,0:3:20.79:21,0,23	0/1:5,0:4:7.49:7,0,49
chr10	11141972	.	C	CT	2164.91	PASS	AB=0.776;AC=27;AF=0.482;AN=56;BaseQRankSum=-4.469;DP=404;FS=1.004;HRun=14;HaplotypeScore=60.0755;InbreedingCoeff=0.4102;MQ=66.65;MQ0=12;MQRankSum=0.534;QD=8.36;ReadPosRankSum=2.393;VQSLOD=2.8368;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,2:30:8.34:0,8,276	0/1:1,1:3:0.84:21,0,1	0/1:25,2:13:19.74:20,0,23	0/1:19,1:13:0.97:1,0,20	1/1:7,6:12:17.92:149,18,0	0/0:12,0:13:5.26:0,5,152	0/1:15,3:19:40.64:41,0,139	0/0:3,0:21:36.65:0,37,106	0/0:15,0:17:42.43:0,42,261	1/1:4,8:11:1.72:137,2,0	1/1:2,1:3:3:26,3,0	0/0:1,0:4:4.54:0,5,12	0/0:5,0:9:8.12:0,8,24	0/0:7,0:13:20.15:0,20,80	0/1:7,5:13:3.65:116,0,4	1/1:1,13:15:13.41:217,13,0	1/1:11,18:29:28.40:360,28,0	1/1:9,15:23:0.47:270,0,0	0/0:5,0:11:10.15:0,10,29	0/0:2,0:6:6.10:0,6,18	0/0:5,0:12:12.19:0,12,35	0/0:0,0:1:2.04:0,2,6	0/1:2,8:11:0.96:101,0,1	1/1:11,12:25:26.40:331,26,0	0/1:4,1:7:12.89:30,0,13	1/1:7,5:10:21:184,21,0	1/1:5,9:12:23.92:196,24,0	1/1:3,5:9:4.41:141,4,0
chr10	11142100	.	C	CTATG	3556.79	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=-6.289;DP=358;FS=3.749;HRun=0;HaplotypeScore=69.4491;InbreedingCoeff=0.8030;MQ=68.10;MQ0=0;MQRankSum=0.895;QD=34.20;ReadPosRankSum=1.411;VQSLOD=3.2553;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,25:34:45.15:1112,45,0	0/0:4,0:4:12.04:0,12,201	0/0:6,0:6:9.03:0,9,125	0/1:9,0:9:13.99:14,0,64	1/1:4,0:5:3.01:52,3,0	1/1:3,18:21:36.12:868,36,0	1/1:2,9:11:18.06:404,18,0	0/0:22,0:21:33.03:0,33,482	1/1:1,12:13:33.11:813,33,0	0/0:8,0:8:15.05:0,15,250	0/0:9,0:9:24.06:0,24,326	0/0:6,0:6:12.04:0,12,201	0/0:7,0:7:18.06:0,18,296	0/0:7,0:7:12.04:0,12,201	0/0:12,0:12:21.03:0,21,321	0/0:13,0:13:30.07:0,30,420	0/0:28,0:28:54.13:0,54,837	0/0:26,0:26:42.10:0,42,649	0/0:17,0:17:33.06:0,33,470	0/0:6,0:6:15.05:0,15,251	0/0:24,0:24:45.09:0,45,686	0/0:5,0:5:15.05:0,15,236	0/0:3,0:3:6.02:0,6,100	0/0:15,0:15:36.09:0,36,557	1/1:5,0:11:18.06:295,18,0	0/0:16,0:16:36.12:0,36,599	0/0:7,0:7:12.04:0,12,201	0/0:13,0:13:36.12:0,36,602
chr10	11142181	.	C	CT	4415.55	PASS	AB=0.807;AC=48;AF=0.857;AN=56;BaseQRankSum=-2.993;DP=320;FS=23.053;HRun=10;HaplotypeScore=56.3747;InbreedingCoeff=0.3067;MQ=66.63;MQ0=6;MQRankSum=-2.324;QD=16.00;ReadPosRankSum=3.492;VQSLOD=3.6326;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,15:23:54.14:575,54,0	1/1:2,0:2:5.91:39,6,0	0/0:27,0:13:14.30:0,14,137	0/0:17,0:8:10.99:0,11,70	1/1:2,2:4:6.01:62,6,0	1/1:7,9:16:11.40:310,11,0	1/1:6,13:19:14.79:359,15,0	1/1:19,15:32:60.10:614,60,0	1/1:2,5:7:18.03:185,18,0	1/1:8,0:8:17.36:109,17,0	1/1:7,0:6:11.92:95,12,0	1/1:4,4:8:12.03:128,12,0	0/1:5,2:7:14.05:57,0,14	1/1:3,1:4:6.02:64,6,0	1/1:7,0:7:14.88:111,15,0	1/1:10,0:9:17.81:127,18,0	1/1:19,0:18:32.78:249,33,0	1/1:11,0:12:28.18:183,28,0	0/1:14,9:20:4.32:328,0,4	1/1:7,3:10:17.94:166,18,0	0/1:7,4:11:6.60:142,0,7	1/1:0,1:1:3.01:32,3,0	1/1:3,0:4:8.98:73,9,0	1/1:13,0:13:23.80:178,24,0	1/1:2,2:4:3.01:32,3,0	1/1:6,0:5:8.64:46,9,0	1/1:9,0:8:14.84:106,15,0	0/1:7,0:7:5.35:46,0,5
chr10	11142182	.	T	TC	3072.46	PASS	AB=1.000;AC=41;AF=0.732;AN=56;BaseQRankSum=-1.785;DP=323;FS=18.439;HRun=1;HaplotypeScore=63.2619;InbreedingCoeff=0.0906;MQ=65.90;MQ0=6;MQRankSum=-1.855;QD=11.38;ReadPosRankSum=8.678;VQSLOD=-0.4552;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:23:47.71:48,0,56	1/1:0,2:2:6.02:83,6,0	0/0:28,0:13:26.90:0,27,240	0/0:18,0:8:14.38:0,14,107	1/1:5,0:5:5.54:28,6,0	0/1:16,0:16:17.75:18,0,93	0/1:17,0:17:37.86:38,0,80	0/1:33,0:31:50.16:50,0,183	1/1:6,0:6:8.13:24,8,0	1/1:5,5:10:20.96:253,21,0	1/1:1,7:7:14.84:180,15,0	0/1:8,0:8:27.84:28,0,51	0/0:7,0:7:2.79:0,3,116	1/1:4,0:4:3.37:9,3,0	1/1:3,6:9:18.03:232,18,0	1/1:3,7:9:18.05:249,18,0	1/1:9,12:19:39:492,39,0	1/1:3,9:12:30.09:401,30,0	0/1:21,0:18:18.06:18,0,97	0/1:10,0:10:15.70:16,0,44	0/1:10,0:10:19.36:19,0,60	1/1:1,0:1:2.74:12,3,0	1/1:1,3:4:9.03:123,9,0	1/1:4,10:14:29.93:370,30,0	0/1:4,0:4:6.35:6,0,20	1/1:0,5:4:12.03:152,12,0	1/1:5,5:9:15.04:207,15,0	1/1:6,1:7:11.25:185,11,0
chr10	11142195	.	C	CT	2689.12	PASS	AB=0.799;AC=41;AF=0.732;AN=56;BaseQRankSum=-0.088;DP=342;FS=0.000;HRun=10;HaplotypeScore=63.2978;InbreedingCoeff=0.6302;MQ=67.89;MQ0=7;MQRankSum=-6.193;QD=12.17;ReadPosRankSum=-0.278;VQSLOD=3.0048;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:54.70:0,55,479	1/1:1,1:2:3.01:32,3,0	0/0:38,0:18:5.16:0,5,129	0/0:20,0:9:11.38:0,11,81	1/1:1,1:7:2.84:15,3,0	0/0:15,0:15:8.81:0,9,222	0/0:13,0:13:20.93:0,21,172	1/1:14,9:21:8.18:263,8,0	0/0:9,0:9:17.96:0,18,148	1/1:5,6:11:15.04:160,15,0	1/1:2,4:5:12.03:127,12,0	1/1:2,5:7:15.04:160,15,0	1/1:4,4:5:8.61:73,9,0	1/1:2,2:4:2.99:24,3,0	1/1:2,8:10:21.05:223,21,0	1/1:4,8:11:15.04:160,15,0	1/1:10,17:24:42.02:422,42,0	0/1:12,7:17:2.35:165,0,2	1/1:13,5:16:18.02:182,18,0	1/1:8,4:11:18.04:184,18,0	1/1:6,3:9:12.03:128,12,0	0/1:1,0:1:0:0,0,0	1/1:4,3:7:12.01:117,12,0	1/1:4,7:12:15.04:160,15,0	0/1:3,0:6:3.46:25,0,3	1/1:4,1:3:3.01:32,3,0	1/1:3,6:8:12.01:119,12,0	1/1:3,2:5:7.24:91,7,0
chr10	11142326	.	A	ATT	3632.05	PASS	AB=1.000;AC=38;AF=0.679;AN=56;BaseQRankSum=-6.135;DP=262;FS=14.547;HRun=8;HaplotypeScore=48.2462;InbreedingCoeff=0.4873;MQ=71.29;MQ0=6;MQRankSum=-1.225;QD=17.63;ReadPosRankSum=2.872;VQSLOD=0.3733;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:26.26:0,26,81	1/1:6,0:6:11.40:120,11,0	0/0:6,0:4:8.81:0,9,77	0/0:14,0:7:7.20:0,7,70	0/1:7,0:7:10.82:47,0,11	0/0:11,0:11:24.24:0,24,77	0/0:3,0:3:4.44:0,4,14	1/1:9,18:23:45.09:619,45,0	0/0:4,0:4:7.13:0,7,22	1/1:1,0:8:15.12:71,15,0	1/1:0,0:5:12.02:115,12,0	0/1:10,0:10:62.52:63,0,126	0/1:4,0:4:9.92:10,0,57	0/1:2,0:2:16.24:16,0,27	1/1:4,0:4:6.01:66,6,0	1/1:4,0:4:3:29,3,0	1/1:30,0:29:60.02:592,60,0	1/1:32,0:30:57.02:547,57,0	1/1:3,9:12:27.09:417,27,0	1/1:0,4:4:12.04:186,12,0	1/1:0,2:2:3.01:47,3,0	0/0:1,0:1:3.01:0,3,32	1/1:10,0:10:14.92:138,15,0	1/1:6,0:6:14.99:138,15,0	1/1:6,0:6:5.97:45,6,0	1/1:4,0:4:11.75:92,12,0	1/1:8,0:8:12.02:118,12,0	1/1:14,0:14:15.03:156,15,0
chr10	11142327	.	T	TTTA	2522.78	PASS	AB=1.000;AC=46;AF=0.821;AN=56;BaseQRankSum=2.748;DP=268;FS=14.652;HRun=0;HaplotypeScore=53.8761;InbreedingCoeff=0.1362;MQ=71.34;MQ0=6;MQRankSum=-0.830;QD=9.70;ReadPosRankSum=6.227;VQSLOD=1.2291;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:17:30.88:115,31,0	1/1:6,0:6:11.95:93,12,0	0/0:7,0:4:9.03:0,9,117	0/1:14,0:7:3.06:3,0,64	1/1:1,7:8:21.05:303,21,0	1/1:11,0:11:22.41:62,22,0	1/1:4,0:4:4.07:11,4,0	0/1:27,0:23:70.06:77,0,70	1/1:5,0:5:7.93:22,8,0	1/1:8,0:8:9.69:47,10,0	1/1:5,0:5:11.95:92,12,0	0/1:10,0:10:49.81:181,0,50	0/1:4,0:4:25.25:48,0,25	0/1:2,0:2:18.10:45,0,18	1/1:4,0:4:5.98:46,6,0	1/1:4,0:4:2.99:23,3,0	1/1:31,0:30:59.37:459,59,0	1/1:32,0:29:51.42:415,51,0	0/1:12,0:12:19.93:20,0,34	1/1:4,0:4:7:20,7,0	1/1:2,0:2:1.82:5,2,0	0/0:1,0:1:2.92:0,3,17	1/1:10,0:10:3.38:67,3,0	1/1:7,0:7:13.99:99,14,0	1/1:0,6:7:6.02:128,6,0	1/1:4,0:4:11:76,11,0	1/1:8,0:8:11.95:93,12,0	1/1:14,0:14:14.94:116,15,0
chr10	11142328	.	T	TTA	5216.30	PASS	AB=1.000;AC=44;AF=0.786;AN=56;BaseQRankSum=-2.732;DP=277;FS=22.694;HRun=0;HaplotypeScore=44.0390;InbreedingCoeff=0.1283;MQ=71.48;MQ0=6;MQRankSum=-1.993;QD=20.62;ReadPosRankSum=6.786;VQSLOD=2.6470;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:17:29.41:183,29,0	1/1:1,6:7:11.41:214,11,0	0/0:8,0:5:9.03:0,9,121	0/0:15,0:8:0.42:0,0,99	0/1:8,0:8:12.85:56,0,13	1/1:11,0:11:30.19:128,30,0	1/1:4,0:4:5.49:23,5,0	0/1:27,0:23:63.29:201,0,63	1/1:5,0:5:10.91:46,11,0	1/1:8,0:8:21.05:261,21,0	1/1:5,0:5:12.04:215,12,0	0/1:11,0:11:45.93:132,0,46	0/1:5,0:5:23.18:29,0,23	0/1:2,0:2:15.98:34,0,16	1/1:0,5:5:6.02:107,6,0	1/1:2,3:5:3:54,3,0	1/1:2,28:29:60.59:1041,61,0	1/1:3,28:28:53.96:970,54,0	0/1:12,0:12:21.81:144,0,22	1/1:4,0:4:11.97:96,12,0	1/1:2,0:2:2.97:20,3,0	0/0:1,0:1:2.88:0,3,15	1/1:0,10:10:17.97:247,18,0	1/1:0,7:7:15.05:252,15,0	1/1:7,0:7:6:52,6,0	1/1:0,5:5:15.04:224,15,0	1/1:2,8:11:11.66:215,12,0	1/1:0,14:14:15.05:269,15,0
chr10	11142329	.	T	TA	2203.09	PASS	AB=0.919;AC=32;AF=0.571;AN=56;BaseQRankSum=-2.882;DP=273;FS=50.748;HRun=0;HaplotypeScore=48.8371;InbreedingCoeff=0.2393;MQ=71.63;MQ0=6;MQRankSum=-3.700;QD=10.64;ReadPosRankSum=8.536;VQSLOD=1.5719;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,13:17:51.09:654,51,0	0/1:8,0:8:7.03:43,0,7	0/0:8,0:5:11.84:0,12,120	0/0:15,0:8:14.51:0,15,141	0/1:7,0:7:6.48:6,0,39	1/1:0,11:11:33.11:483,33,0	1/1:0,4:4:6.02:88,6,0	0/0:25,0:21:53.56:0,54,340	1/1:0,6:6:12.04:175,12,0	0/1:8,0:8:1.33:1,0,39	1/1:5,0:5:11.36:57,11,0	0/1:6,5:11:32.32:81,0,32	0/1:4,1:5:11.99:12,0,26	0/1:1,1:2:10.14:22,0,10	1/1:5,0:5:5.68:29,6,0	0/1:4,0:4:8.60:9,0,19	1/1:30,0:29:24.08:252,24,0	1/1:29,0:26:30.33:236,30,0	0/0:11,0:11:32.47:0,32,221	0/0:4,0:4:11.21:0,11,55	0/0:2,0:2:2.92:0,3,17	0/0:1,0:1:2.50:0,2,9	0/1:11,0:11:18.95:19,0,28	1/1:7,0:7:7.12:51,7,0	1/1:7,0:7:5.17:21,5,0	0/1:5,0:5:6.21:30,0,6	0/1:11,0:11:10.48:44,0,10	1/1:14,0:14:14.20:72,14,0
chr10	11142330	.	T	TTTA	403.07	PASS	AB=0.872;AC=14;AF=0.250;AN=56;BaseQRankSum=-3.761;DP=276;FS=2.442;HRun=0;HaplotypeScore=64.5197;InbreedingCoeff=0.2573;MQ=71.54;MQ0=6;MQRankSum=1.073;QD=4.33;ReadPosRankSum=-1.220;VQSLOD=1.5933;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:47.75:0,48,373	0/0:8,0:8:16.54:0,17,94	0/0:8,0:5:5.21:0,5,126	0/1:15,0:8:7.12:7,0,121	0/1:8,0:8:18:56,0,18	0/0:11,0:11:32.99:0,33,283	0/0:4,0:4:6:0,6,52	0/1:24,0:20:62.49:77,0,62	0/0:6,0:6:11.95:0,12,96	0/0:8,0:8:23.76:0,24,187	0/0:5,0:5:14.20:0,14,72	0/1:7,4:11:37.50:186,0,37	0/1:4,1:5:9.25:71,0,9	0/1:1,1:2:19.75:44,0,20	0/0:6,0:6:4.61:0,5,18	0/0:4,0:4:5.80:0,6,41	0/0:30,0:29:59.94:0,60,275	0/0:29,0:26:52.69:0,53,241	1/1:12,0:12:14.87:40,15,0	1/1:5,0:5:6.99:20,7,0	1/1:3,0:3:1.81:5,2,0	0/0:1,0:1:2.96:0,3,19	0/0:12,0:12:15.20:0,15,88	0/0:7,0:7:14:0,14,69	1/1:8,0:8:5.99:52,6,0	0/0:5,0:5:14.60:0,15,92	0/0:11,0:11:13.86:0,14,77	0/0:11,0:11:13.05:0,13,53
chr10	11143911	.	T	TG	5278.32	PASS	AB=0.540;AC=22;AF=0.393;AN=56;BaseQRankSum=-13.016;DP=434;FS=0.830;HRun=8;HaplotypeScore=43.6219;InbreedingCoeff=0.8303;MQ=85.37;MQ0=0;MQRankSum=-1.627;QD=27.49;ReadPosRankSum=3.708;VQSLOD=5.0872;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,102,933	1/1:0,1:1:3.01:35,3,0	0/0:14,0:14:23.99:0,24,215	0/0:16,0:16:20.17:0,20,234	0/0:4,0:4:9:0,9,82	0/0:10,0:10:24.01:0,24,220	0/0:30,0:30:71.96:0,72,643	0/0:20,0:20:41.77:0,42,384	0/0:6,0:6:12:0,12,110	1/1:2,9:11:27.08:312,27,0	1/1:0,4:4:12.04:138,12,0	0/0:28,0:27:69.02:0,69,627	0/0:6,0:6:15.01:0,15,137	0/0:16,0:16:48.01:0,48,435	1/1:4,18:22:44.87:519,45,0	0/1:2,9:11:0.39:250,0,0	1/1:5,37:42:99:1246,108,0	1/1:4,34:38:71.83:1080,72,0	0/0:15,0:15:32.03:0,32,278	0/0:1,0:1:3:0,3,27	0/0:25,0:25:63.01:0,63,572	0/0:6,0:6:18:0,18,160	0/1:1,8:9:0.39:250,0,0	1/1:3,28:31:75.22:865,75,0	0/0:5,0:5:15.01:0,15,137	1/1:3,10:13:33.09:375,33,0	1/1:2,6:8:12.04:138,12,0	1/1:0,2:2:6.02:69,6,0
chr10	11145709	.	A	AAGG	3479.80	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-10.046;DP=431;FS=7.891;HRun=0;HaplotypeScore=58.4477;InbreedingCoeff=0.8567;MQ=84.24;MQ0=0;MQRankSum=-4.944;QD=37.82;ReadPosRankSum=2.626;VQSLOD=4.2162;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:12,21:37:48.64:995,49,0	0/0:2,0:2:6.02:0,6,88	0/0:14,0:14:42.13:0,42,583	0/0:17,0:17:38.24:0,38,534	0/0:5,0:5:12.04:0,12,176	1/1:3,8:11:24.08:497,24,0	1/1:6,25:31:69.24:1428,69,0	0/0:18,0:18:39.11:0,39,537	1/1:4,9:13:27.09:560,27,0	0/0:12,0:12:33.11:0,33,470	0/0:15,0:15:36.12:0,36,530	0/0:25,0:25:48.15:0,48,686	0/0:8,0:8:18.04:0,18,245	0/0:15,0:15:42.14:0,42,619	0/0:7,0:7:15.03:0,15,201	0/0:19,0:19:48.16:0,48,707	0/0:30,0:30:63.21:0,63,928	0/0:29,0:29:51.14:0,51,728	0/0:12,0:12:21.07:0,21,307	0/0:6,0:6:12.04:0,12,177	0/0:45,0:45:99:0,102,1480	0/0:3,0:3:6.02:0,6,88	0/0:4,0:4:9.03:0,9,132	0/0:28,0:28:57.17:0,57,801	0/0:10,0:10:12.03:0,12,177	0/0:8,0:8:9.02:0,9,113	0/0:5,0:5:15.05:0,15,221	0/0:2,0:2:6.02:0,6,88
chr10	11145872	.	A	AC	544.59	PASS	AB=1.000;AC=24;AF=0.462;AN=52;BaseQRankSum=5.162;DP=136;FS=0.982;HRun=8;HaplotypeScore=18.8410;InbreedingCoeff=0.6636;MQ=83.24;MQ0=0;MQRankSum=-1.006;QD=11.35;ReadPosRankSum=2.072;VQSLOD=0.5054;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:20.99:0,21,189	1/1:0,3:3:9.03:103,9,0	1/1:7,0:6:3.76:17,4,0	0/0:7,0:5:8.97:0,9,75	1/1:1,0:3:5.68:29,6,0	0/0:3,0:3:6:0,6,55	0/0:11,0:11:20.97:0,21,185	0/0:10,0:10:17.03:0,17,144	0/0:3,0:3:6:0,6,55	0/1:2,0:2:0:0,0,0	0/1:2,0:2:0:0,0,0	0/0:5,0:5:9:0,9,82	0/0:2,0:2:3:0,3,27	0/0:3,0:3:6:0,6,55	1/1:3,0:3:3:29,3,0	1/1:0,6:6:12.04:138,12,0	./.	1/1:2,3:5:6.02:69,6,0	0/0:5,0:5:12.01:0,12,110	0/0:8,0:8:18:0,18,164	0/0:12,0:12:21:0,21,192	0/0:2,0:2:6:0,6,55	1/1:1,2:3:6.01:59,6,0	1/1:2,2:4:9.03:104,9,0	1/1:0,0:3:5.68:29,6,0	1/1:1,4:5:9.03:104,9,0	./.	1/1:0,2:2:3.01:35,3,0
chr10	11148261	.	G	GAA	3552.58	PASS	AB=0.623;AC=20;AF=0.357;AN=56;BaseQRankSum=-11.385;DP=538;FS=3.217;HRun=12;HaplotypeScore=88.9692;InbreedingCoeff=0.6835;MQ=61.45;MQ0=10;MQRankSum=-1.225;QD=15.05;ReadPosRankSum=-1.658;VQSLOD=2.5077;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,40:44:60.20:828,60,0	0/0:10,0:10:14.80:0,15,78	0/0:16,0:6:7.33:0,7,52	0/0:10,0:9:19.86:0,20,165	0/0:5,0:18:28.15:0,28,135	1/1:4,16:20:13.54:323,14,0	1/1:7,12:20:28.95:353,29,0	1/1:4,17:21:43.06:463,43,0	1/1:12,4:16:26.91:314,27,0	0/0:20,0:20:37.61:0,38,178	0/0:20,0:20:16.11:0,16,161	0/1:5,0:15:15.02:21,0,15	0/1:4,0:13:7.29:40,0,7	0/1:3,0:16:15.36:15,0,16	0/0:19,0:19:24.55:0,25,119	0/0:18,0:18:38.77:0,39,204	0/0:24,0:23:45.25:0,45,247	0/0:23,0:22:36.59:0,37,213	1/1:6,18:24:56.59:682,57,0	1/1:6,8:14:23.25:263,23,0	1/1:0,11:12:11.97:144,12,0	0/1:12,1:18:28.64:105,0,29	0/0:15,0:15:30.08:0,30,135	0/0:24,0:24:33.17:0,33,187	0/0:8,0:20:28.80:0,29,148	0/0:26,0:26:30.24:0,30,183	0/0:20,0:20:30.33:0,30,150	0/0:19,0:18:26.14:0,26,115
chr10	11148270	.	AAAAG	A	1667.10	PASS	AB=0.994;AC=16;AF=0.286;AN=56;BaseQRankSum=8.594;DP=561;FS=1.202;HRun=0;HaplotypeScore=115.9360;InbreedingCoeff=0.2717;MQ=62.73;MQ0=9;MQRankSum=0.621;QD=6.70;ReadPosRankSum=4.406;VQSLOD=2.3643;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:78.13:0,78,1303	0/1:12,0:12:6.19:73,0,6	0/0:21,0:10:23.09:0,23,251	0/0:10,0:9:23.05:0,23,365	0/0:19,0:19:18.83:0,19,445	0/0:18,0:18:27.09:0,27,512	0/0:17,0:17:38.68:0,39,612	0/0:23,0:22:5.77:0,6,548	0/0:18,0:18:41.68:0,42,617	1/1:24,1:25:35.72:387,36,0	0/1:20,1:21:40.48:219,0,40	0/0:16,0:16:26.90:0,27,409	0/0:15,0:15:39.05:0,39,624	0/0:14,0:14:11.53:0,12,203	1/1:21,0:21:8.62:107,9,0	0/1:21,0:21:55.80:81,0,56	0/1:25,0:25:95.08:95,0,113	0/1:18,0:17:69.58:70,0,70	0/0:27,0:26:55.72:0,56,846	0/0:16,0:15:38.89:0,39,563	0/0:14,0:14:2.25:0,2,210	0/0:14,0:14:35.35:0,35,525	1/1:17,1:18:33.35:187,33,0	0/1:25,0:25:56.55:57,0,103	0/0:22,0:22:7.68:0,8,565	1/1:26,3:29:11.22:382,11,0	0/1:18,0:18:18.08:102,0,18	0/1:16,0:15:6.68:84,0,7
chr10	11148271	.	AAAG	A	5895.71	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-4.779;DP=571;FS=1.271;HRun=0;HaplotypeScore=96.0883;InbreedingCoeff=0.9878;MQ=63.64;MQ0=9;MQRankSum=1.503;QD=23.97;ReadPosRankSum=3.925;VQSLOD=5.0240;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:78.16:0,78,1027	1/1:3,9:12:21.02:273,21,0	0/0:22,0:11:20.76:0,21,214	0/0:10,0:9:23.23:0,23,338	0/0:19,0:20:44.94:0,45,409	0/0:18,0:18:27.09:0,27,408	0/0:18,0:18:36.08:0,36,475	0/0:22,0:21:34.65:0,35,465	0/0:18,0:18:37.65:0,38,474	1/1:4,21:25:66.10:759,66,0	1/1:6,15:21:47.51:472,48,0	0/0:18,0:18:27.04:0,27,358	0/0:17,0:17:39.07:0,39,512	0/0:14,0:14:8.83:0,9,148	1/1:4,17:21:33.11:465,33,0	1/1:5,15:20:32.78:434,33,0	1/1:8,17:25:38.89:542,39,0	1/1:6,11:16:27.09:381,27,0	0/0:30,0:29:65.33:0,65,766	0/0:16,0:15:35.92:0,36,455	0/0:14,0:14:17.40:0,17,192	0/0:15,0:15:30.04:0,30,406	1/1:3,15:18:36.06:469,36,0	1/1:7,17:24:26.76:349,27,0	0/0:22,0:22:48.04:0,48,487	1/1:7,22:29:77.82:889,78,0	1/1:4,14:18:33.06:442,33,0	1/1:5,11:15:30.10:421,30,0
chr10	11148272	.	AAG	A	2844.81	PASS	AB=0.981;AC=21;AF=0.375;AN=56;BaseQRankSum=3.220;DP=569;FS=4.453;HRun=0;HaplotypeScore=96.2899;InbreedingCoeff=0.4616;MQ=66.21;MQ0=9;MQRankSum=-0.736;QD=10.16;ReadPosRankSum=3.718;VQSLOD=3.2219;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:78.03:0,78,761	1/1:12,0:12:4.67:122,5,0	0/0:25,0:14:24.57:0,25,245	0/0:10,0:9:20.94:0,21,267	0/0:20,0:20:45.56:0,46,303	0/0:17,0:17:27.06:0,27,291	0/0:17,1:18:10.93:0,11,320	0/1:20,0:19:1.43:1,0,289	0/0:18,0:18:42.57:0,43,380	1/1:25,0:25:46.67:469,47,0	0/1:20,1:21:8.74:284,0,9	0/0:20,0:20:7.13:0,7,303	0/0:17,0:17:38.98:0,39,387	0/1:14,0:14:16.84:17,0,95	1/1:20,1:21:32.64:225,33,0	0/1:19,1:20:22.14:203,0,22	0/1:25,0:25:37:208,0,37	0/1:17,0:16:39.53:145,0,40	0/0:29,0:28:21.03:0,21,534	0/0:16,0:15:35.58:0,36,342	0/0:14,0:14:17.89:0,18,157	0/0:13,1:14:18.36:0,18,280	1/1:18,0:18:35.60:244,36,0	0/1:23,1:24:29.90:168,0,30	0/0:21,0:21:50.55:0,51,354	1/1:28,1:29:40.76:547,41,0	1/1:17,1:18:13.75:202,14,0	1/1:16,0:15:29.68:205,30,0
chr10	11148273	.	AG	A	2258.53	PASS	AB=0.981;AC=21;AF=0.375;AN=56;BaseQRankSum=7.364;DP=547;FS=4.513;HRun=1;HaplotypeScore=87.8315;InbreedingCoeff=0.3723;MQ=67.75;MQ0=8;MQRankSum=-0.393;QD=7.90;ReadPosRankSum=3.622;VQSLOD=1.2829;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:76.08:0,76,474	1/1:11,0:11:1.93:85,2,0	0/0:26,0:15:25.41:0,25,242	0/0:10,0:9:23.26:0,23,249	0/0:20,0:20:3.04:0,3,138	0/0:17,0:17:26.14:0,26,162	0/0:18,0:18:32.73:0,33,234	0/1:19,0:18:99:109,0,174	0/0:17,0:17:31.03:0,31,246	1/1:23,1:24:39.90:388,40,0	0/1:19,1:20:25.43:217,0,25	0/0:19,0:19:29.78:0,30,275	0/0:16,0:16:38.46:0,38,282	0/0:12,0:12:2.57:0,3,66	1/1:21,0:21:31.59:161,32,0	0/1:19,1:20:32.84:125,0,33	0/1:24,1:25:50.50:134,0,51	0/1:17,0:16:63.94:93,0,64	0/1:28,0:27:99:134,0,320	0/0:14,0:13:34.83:0,35,237	0/0:12,0:12:17.68:0,18,119	0/0:13,1:14:21.76:0,22,214	1/1:18,0:18:34.55:179,35,0	0/1:23,0:23:46.46:101,0,46	0/0:20,0:20:31.31:0,31,218	1/1:29,0:29:30.17:436,30,0	1/1:17,0:17:7.48:138,7,0	1/1:13,1:14:28.83:150,29,0
chr10	11148878	.	GGCCA	G	4352.03	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=14.224;DP=699;FS=1.988;HRun=0;HaplotypeScore=147.1823;InbreedingCoeff=0.9831;MQ=78.09;MQ0=0;MQRankSum=-13.729;QD=54.40;ReadPosRankSum=3.505;VQSLOD=6.1212;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,120,3420	0/0:23,0:23:66.22:0,66,1858	0/0:19,0:20:60.17:0,60,1435	0/0:15,0:15:39.10:0,39,960	0/0:15,0:15:45.15:0,45,1297	0/0:21,0:21:63.22:0,63,1811	0/0:43,0:43:99:0,129,3635	0/0:30,0:30:87.30:0,87,2462	0/0:27,0:27:81.28:0,81,2315	0/0:27,0:27:78.27:0,78,2212	0/0:19,0:19:54.19:0,54,1563	1/1:5,24:29:84.26:1507,84,0	1/1:0,16:16:48.16:927,48,0	1/1:0,26:26:78.27:1499,78,0	0/0:31,0:31:93.32:0,93,2695	0/0:29,0:29:87.30:0,87,2521	0/0:34,0:34:99:0,102,2853	0/0:32,0:32:93.30:0,93,2592	0/0:17,0:17:51.18:0,51,1428	0/0:13,0:13:39.13:0,39,1129	0/0:54,0:54:99:0,163,4667	1/1:0,9:9:24.05:419,24,0	0/0:19,0:19:57.20:0,57,1583	0/0:38,0:38:99:0,111,3189	0/0:25,0:25:72.25:0,72,2037	0/0:35,0:35:99:0,102,2859	0/0:9,0:9:27.09:0,27,766	0/0:3,0:3:9.03:0,9,261
chr10	11148884	.	GAGAAAA	G	5365.35	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=14.274;DP=708;FS=2.619;HRun=0;HaplotypeScore=173.5648;InbreedingCoeff=0.9909;MQ=76.49;MQ0=0;MQRankSum=-13.795;QD=68.79;ReadPosRankSum=3.634;VQSLOD=5.6560;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,129,4557	0/0:21,0:21:63.22:0,63,2218	0/0:17,0:17:42.13:0,42,1201	0/0:15,0:16:42.14:0,42,1354	0/0:16,0:16:48.16:0,48,1717	0/0:19,0:19:57.19:0,57,1867	0/0:43,0:43:99:0,126,4724	0/0:32,0:32:93.32:0,93,3341	0/0:27,0:27:81.26:0,81,2943	0/0:28,0:28:84.29:0,84,3051	0/0:19,0:19:54.18:0,54,1917	1/1:2,25:27:81.28:1827,81,0	1/1:0,16:16:48.16:1149,48,0	1/1:0,26:26:78.27:1864,78,0	0/0:32,0:32:96.33:0,96,3534	0/0:29,0:29:87.30:0,87,3260	0/0:33,0:33:99:0,99,3562	0/0:30,0:30:84.29:0,84,3157	0/0:18,0:18:54.18:0,54,1950	0/0:15,0:15:45.15:0,45,1694	0/0:55,0:55:99:0,166,6107	1/1:0,9:9:24.08:525,24,0	0/0:19,0:19:57.20:0,57,1998	0/0:35,0:35:99:0,105,3947	0/0:26,0:26:78.27:0,78,2800	0/0:39,0:39:99:0,111,4138	0/0:14,0:14:42.14:0,42,1501	0/0:4,0:4:12.04:0,12,452
chr10	11149278	.	G	GTT	2032.44	PASS	AB=1.000;AC=25;AF=0.446;AN=56;BaseQRankSum=2.569;DP=560;FS=6.699;HRun=11;HaplotypeScore=106.3969;InbreedingCoeff=0.5903;MQ=58.48;MQ0=35;MQRankSum=0.310;QD=6.71;ReadPosRankSum=-1.600;VQSLOD=0.5535;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:52.16:0,52,450	0/1:10,0:9:16.22:16,0,23	0/1:69,0:19:2.59:3,0,9	0/0:58,0:14:1.23:0,1,7	1/1:19,1:20:33.57:383,34,0	0/0:18,0:15:3.20:0,3,236	0/0:16,0:17:26.68:0,27,214	0/0:26,0:26:7.63:0,8,281	0/0:9,0:9:14.61:0,15,121	1/1:13,0:13:9.39:138,9,0	0/1:11,0:11:1.15:48,0,1	0/0:13,0:13:24.76:0,25,193	0/0:15,0:13:22.92:0,23,160	0/0:11,0:11:13.85:0,14,82	1/1:19,0:19:9.05:77,9,0	0/1:11,0:10:12.61:42,0,13	1/1:17,0:16:8.64:29,9,0	1/1:27,0:26:11.11:205,11,0	0/0:18,0:15:6.55:0,7,177	0/0:19,0:19:14.12:0,14,273	0/0:14,0:11:20.78:0,21,170	0/0:10,0:10:17.82:0,18,142	1/1:11,0:10:11.08:56,11,0	1/1:14,0:13:15.30:105,15,0	1/1:25,3:24:51.24:590,51,0	1/1:17,0:16:30.61:231,31,0	1/1:22,0:20:41.18:282,41,0	0/1:13,0:11:11.46:26,0,11
chr10	11149292	.	T	TG	349.89	PASS	AB=0.958;AC=12;AF=0.214;AN=56;BaseQRankSum=2.704;DP=551;FS=8.712;HRun=0;HaplotypeScore=94.4477;InbreedingCoeff=-0.2877;MQ=51.41;MQ0=48;MQRankSum=1.548;QD=1.46;ReadPosRankSum=-1.123;VQSLOD=1.3256;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:62.89:0,63,634	0/1:10,0:9:7.23:7,0,43	0/1:55,0:11:4.49:4,0,54	0/0:56,0:11:4.71:0,5,27	0/0:16,0:16:2.10:0,2,51	0/0:19,0:14:41.98:0,42,385	0/0:12,0:11:29.95:0,30,277	0/0:23,0:21:47.76:0,48,360	0/0:12,0:12:26.25:0,26,221	0/1:18,0:17:79.13:79,0,83	0/1:14,0:14:26.96:27,0,64	0/0:14,0:14:40.80:0,41,336	0/0:17,0:15:36.66:0,37,319	0/0:9,0:9:23.86:0,24,224	0/1:11,5:18:3.43:3,0,81	0/0:10,0:9:0.72:0,1,71	0/1:19,1:18:20.15:31,0,20	0/1:27,0:26:53.35:53,0,115	0/0:24,0:15:29.02:0,29,239	0/0:17,0:17:48.80:0,49,359	0/0:16,0:10:29.87:0,30,245	0/0:10,0:10:29.87:0,30,265	0/1:11,0:10:32.88:41,0,33	0/1:12,0:11:30.37:40,0,30	0/0:30,0:25:2.37:0,2,156	0/1:19,1:17:82.13:82,0,111	0/1:20,1:19:48.92:113,0,49	0/1:12,1:11:7.57:8,0,36
chr10	11149297	.	TTTTTTTTTTTTG	T	1113.87	PASS	AB=0.980;AC=17;AF=0.304;AN=56;BaseQRankSum=5.886;DP=542;FS=20.269;HRun=0;HaplotypeScore=174.4397;InbreedingCoeff=-0.1203;MQ=50.15;MQ0=45;MQRankSum=-0.552;QD=3.75;ReadPosRankSum=0.893;VQSLOD=1.3982;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:66.48:0,66,1668	1/1:10,0:9:7.88:166,8,0	0/0:57,0:10:5.17:0,5,101	0/1:54,0:12:0.08:0,0,47	0/0:16,0:16:35.25:0,35,518	0/0:19,0:14:39.11:0,39,1299	0/0:13,0:12:31.79:0,32,485	0/1:23,0:21:55.30:55,0,72	0/0:11,0:11:26.83:0,27,531	0/1:17,1:17:28.41:143,0,28	0/1:11,2:13:9.77:174,0,10	0/0:14,0:14:33.97:0,34,952	0/0:15,0:13:31.66:0,32,1011	0/0:8,0:8:17.27:0,17,639	0/1:17,0:16:38.74:65,0,39	1/1:8,1:8:1.36:215,1,0	0/1:20,0:18:3.13:3,0,28	0/1:25,0:24:84.35:100,0,84	0/1:22,0:13:23.12:23,0,29	0/1:17,0:17:62.11:62,0,77	0/0:15,0:9:0.49:0,0,26	0/0:10,0:10:20.32:0,20,281	0/0:11,0:10:1.08:0,1,31	0/1:12,1:12:1.60:88,0,2	0/0:29,0:25:54.07:0,54,1377	0/1:20,0:17:18.56:19,0,76	0/1:22,0:20:28.85:110,0,29	0/1:14,0:12:40.45:40,0,61
chr10	11149306	.	TTTG	T	2352.69	PASS	AB=1.000;AC=35;AF=0.625;AN=56;BaseQRankSum=1.878;DP=525;FS=10.422;HRun=0;HaplotypeScore=99.7704;InbreedingCoeff=0.5187;MQ=54.52;MQ0=36;MQRankSum=-1.691;QD=6.55;ReadPosRankSum=-0.272;VQSLOD=1.8411;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:25.81:0,26,389	1/1:9,0:9:10.66:64,11,0	0/1:60,0:21:12.66:13,0,149	0/0:52,0:15:10.91:0,11,123	0/1:21,0:21:24.19:24,0,142	0/0:20,0:15:4.07:0,4,241	0/0:18,0:17:7.92:0,8,221	1/1:18,0:16:14.19:218,14,0	0/0:12,0:12:16.68:0,17,146	1/1:14,0:13:31.75:247,32,0	1/1:13,0:13:30.37:191,30,0	0/0:17,0:17:38.64:0,39,387	0/0:13,0:11:0.49:0,0,206	0/0:9,0:9:12.63:0,13,165	1/1:19,0:18:27.81:175,28,0	1/1:9,0:8:23.41:185,23,0	1/1:23,0:21:2.96:19,3,0	1/1:24,0:23:18.71:262,19,0	1/1:12,7:11:18.90:150,19,0	1/1:12,0:12:14.29:144,14,0	1/1:12,0:6:10.84:64,11,0	0/1:5,0:5:2.21:2,0,88	1/1:12,0:11:21.89:161,22,0	1/1:14,0:13:26.72:199,27,0	0/1:26,0:23:13.88:14,0,190	1/1:13,0:10:4.50:66,5,0	1/1:18,0:18:42.98:320,43,0	0/1:18,0:17:9.82:27,0,10
chr10	11149307	.	TTG	T	2842.07	PASS	AB=1.000;AC=40;AF=0.714;AN=56;BaseQRankSum=2.846;DP=513;FS=30.752;HRun=0;HaplotypeScore=89.5149;InbreedingCoeff=0.2408;MQ=54.97;MQ0=32;MQRankSum=-1.871;QD=6.78;ReadPosRankSum=0.085;VQSLOD=1.3196;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:25:25.20:25,0,243	1/1:8,1:9:11:80,11,0	0/1:60,0:22:16.58:17,0,146	0/0:51,0:15:11.28:0,11,124	0/1:20,0:20:92.14:92,0,124	0/1:18,0:14:36.23:36,0,174	0/0:17,0:16:4.35:0,4,194	1/1:18,0:16:13.72:214,14,0	0/1:12,0:12:7.50:7,0,94	1/1:14,0:13:32.95:292,33,0	1/1:13,0:13:33.92:227,34,0	0/0:17,0:17:28:0,28,301	0/1:13,0:11:27.29:27,0,132	0/0:9,0:9:11.19:0,11,113	1/1:19,0:18:27.35:176,27,0	1/1:8,0:7:20.95:173,21,0	1/1:22,0:21:3:29,3,0	1/1:23,1:23:31.21:316,31,0	1/1:18,0:11:20.84:139,21,0	1/1:12,0:12:18.58:158,19,0	1/1:11,0:5:11.56:81,12,0	0/1:5,0:5:3.38:3,0,61	1/1:12,0:11:23.89:200,24,0	1/1:14,0:13:26.31:187,26,0	0/1:24,0:21:39.62:40,0,148	1/1:13,0:10:9.89:105,10,0	1/1:16,2:18:42.70:345,43,0	1/1:17,0:17:0.18:46,0,0
chr10	11150682	.	GC	G	332.30	PASS	AB=0.892;AC=12;AF=0.240;AN=50;BaseQRankSum=-3.365;DP=223;FS=10.526;HRun=11;HaplotypeScore=36.6825;InbreedingCoeff=0.3405;MQ=87.22;MQ0=4;MQRankSum=0.637;QD=4.05;ReadPosRankSum=3.714;VQSLOD=-0.4961;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,6:12:5.70:49,6,0	./.	0/0:20,0:15:0.54:0,1,80	0/0:15,0:13:18.53:0,19,167	0/0:4,0:4:2.68:0,3,11	0/0:7,2:9:0:0,0,0	1/1:10,11:23:10.09:177,10,0	0/0:8,0:7:2.80:0,3,13	1/1:4,10:14:20.92:172,21,0	0/0:7,0:6:3.83:0,4,20	0/0:1,0:1:0:0,0,0	0/1:8,1:9:0.74:1,0,155	0/0:3,0:3:6:0,6,54	0/0:4,0:4:6.45:0,6,52	0/0:9,0:8:5.92:0,6,39	0/0:8,0:7:5.59:0,6,26	0/0:15,0:14:21.59:0,22,115	0/1:17,0:16:18.54:19,0,53	0/0:4,0:4:2.97:0,3,20	./.	0/0:4,0:4:0.47:0,0,1	0/1:4,0:4:0.01:0,0,0	1/1:0,1:1:3:25,3,0	0/0:14,0:14:17.59:0,18,115	./.	0/1:1,1:2:6.72:19,0,7	0/0:7,0:6:5.84:0,6,35	0/0:2,0:2:2.80:0,3,14
chr10	11150838	.	C	CT	1573.27	PASS	AB=0.931;AC=36;AF=0.643;AN=56;BaseQRankSum=4.703;DP=425;FS=2.787;HRun=14;HaplotypeScore=112.2430;InbreedingCoeff=0.4850;MQ=78.62;MQ0=6;MQRankSum=-6.703;QD=5.46;ReadPosRankSum=-2.573;VQSLOD=2.1619;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:60.24:0,60,397	0/1:2,1:3:0.80:22,0,1	0/0:40,0:21:16.52:0,17,98	0/1:40,0:27:36.03:40,0,36	1/1:9,0:9:6.31:36,6,0	0/0:16,0:19:34.74:0,35,196	0/1:9,0:10:0.30:0,0,64	1/1:20,0:16:6.67:24,7,0	0/0:11,0:11:22.80:0,23,141	1/1:6,6:12:21.97:178,22,0	0/1:4,0:4:3.23:30,0,3	0/0:11,0:11:9.99:0,10,81	0/0:9,0:9:7.32:0,7,32	0/1:9,0:9:14.11:14,0,46	1/1:16,7:21:30.53:215,31,0	1/1:14,7:22:39.69:259,40,0	1/1:10,5:17:22.47:156,22,0	0/1:10,2:12:11.26:54,0,11	1/1:6,0:6:14.67:63,15,0	1/1:2,0:2:4.52:24,5,0	1/1:11,0:11:13.08:62,13,0	0/0:7,0:7:2.83:0,3,49	1/1:6,1:6:7.08:43,7,0	1/1:20,2:23:5.35:53,5,0	1/1:5,0:5:3.76:17,4,0	1/1:14,2:16:29.14:172,29,0	1/1:17,6:24:26.37:187,26,0	1/1:5,5:10:12.94:107,13,0
chr10	11150852	.	TGG	T	2626.62	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=6.708;DP=438;FS=3.246;HRun=5;HaplotypeScore=106.1552;InbreedingCoeff=0.8820;MQ=86.41;MQ0=9;MQRankSum=-7.877;QD=14.35;ReadPosRankSum=2.869;VQSLOD=0.0538;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:90.29:0,90,1299	1/1:2,0:2:5.75:30,6,0	0/0:69,0:37:53.85:0,54,823	0/0:72,0:38:46.32:0,46,623	1/1:3,0:3:8.83:55,9,0	0/0:19,0:19:53.39:0,53,731	0/0:11,0:12:7:0,7,400	1/1:4,5:9:20.86:223,21,0	0/0:11,0:11:33.11:0,33,473	1/1:10,0:10:16.22:143,16,0	1/1:4,0:4:2.37:10,2,0	0/0:7,0:7:18:0,18,225	0/0:13,0:13:26.39:0,26,496	0/0:10,0:10:24.07:0,24,367	1/1:20,0:20:42.49:318,42,0	1/1:20,0:22:46.86:339,47,0	1/1:16,0:16:37.66:249,38,0	1/1:9,1:11:29.28:275,29,0	1/1:5,1:8:23.60:190,24,0	1/1:1,0:2:5.83:38,6,0	1/1:4,0:5:11.68:69,12,0	0/0:6,0:6:15.02:0,15,198	1/1:6,0:5:8.83:74,9,0	1/1:17,1:17:17.04:221,17,0	1/1:2,0:2:5.95:58,6,0	1/1:10,1:11:17.66:147,18,0	1/1:18,0:18:29.79:152,30,0	1/1:8,2:10:29.61:250,30,0
chr10	11150867	.	TC	T	3972.02	PASS	AB=0.565;AC=29;AF=0.537;AN=54;BaseQRankSum=1.167;DP=433;FS=12.018;HRun=3;HaplotypeScore=84.4746;InbreedingCoeff=0.8394;MQ=78.32;MQ0=13;MQRankSum=-4.545;QD=22.70;ReadPosRankSum=1.158;VQSLOD=2.2531;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:75.22:0,75,1008	1/1:0,2:2:6.02:74,6,0	0/0:80,0:41:89.60:0,90,1006	0/0:67,2:32:58.18:0,58,568	0/0:2,0:2:6.01:0,6,70	0/0:16,0:16:45.13:0,45,609	0/0:16,0:16:45.07:0,45,528	1/1:1,17:17:47.94:522,48,0	0/0:8,0:8:21.07:0,21,293	1/1:1,5:6:18.05:206,18,0	./.	0/0:5,0:5:12.03:0,12,150	0/0:10,0:10:24.02:0,24,280	0/0:9,0:9:24.07:0,24,318	1/1:7,14:19:26.68:332,27,0	1/1:9,12:21:36.11:440,36,0	1/1:6,9:15:30.02:338,30,0	1/1:1,9:10:21.07:259,21,0	0/1:3,10:12:28.27:312,0,28	1/1:0,1:1:3.01:36,3,0	1/1:0,9:9:18.05:215,18,0	0/0:6,0:6:15.04:0,15,194	1/1:2,4:5:6.02:74,6,0	1/1:4,13:16:17.94:184,18,0	0/0:5,0:5:12.03:0,12,150	1/1:1,8:9:27.08:323,27,0	1/1:5,11:16:28.54:367,29,0	1/1:3,8:11:24.06:289,24,0
chr10	11151159	.	ATATATATGTATG	A	524.86	PASS	AB=1.000;AC=5;AF=0.093;AN=54;BaseQRankSum=0.786;DP=317;FS=34.616;HRun=0;HaplotypeScore=118.1245;InbreedingCoeff=0.6448;MQ=63.02;MQ0=3;MQRankSum=-4.001;QD=18.10;ReadPosRankSum=-1.266;VQSLOD=0.9578;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:48.11:0,48,1472	0/0:4,0:4:6.02:0,6,239	0/0:10,0:7:8.99:0,9,100	0/1:13,0:8:1.74:6,0,2	1/1:3,9:12:21.07:572,21,0	0/0:11,0:11:27.09:0,27,1425	0/0:3,0:3:9.03:0,9,357	0/0:37,0:37:90.29:0,90,2748	0/0:9,0:9:27.04:0,27,849	0/0:14,0:14:33.07:0,33,867	0/0:10,0:10:21.07:0,21,730	0/0:10,0:10:18.03:0,18,452	0/0:4,0:4:9.03:0,9,412	0/0:10,0:10:15.05:0,15,687	0/0:11,0:11:17.96:0,18,614	0/0:13,0:12:27.09:0,27,963	0/0:24,0:24:63.20:0,63,2152	0/0:14,0:14:36.06:0,36,1122	0/0:21,0:19:19.05:0,19,1208	0/0:6,0:6:9.03:0,9,365	0/0:3,0:3:6:0,6,182	0/0:4,0:4:12.02:0,12,391	0/0:13,0:13:30.10:0,30,938	./.	1/1:0,4:4:3.01:58,3,0	0/0:9,0:9:27.09:0,27,841	0/0:14,0:14:27.06:0,27,580	0/0:16,0:16:33.11:0,33,1238
chr10	11151171	.	GTA	G	3475.93	PASS	AB=1.000;AC=26;AF=0.481;AN=54;BaseQRankSum=-4.304;DP=290;FS=17.534;HRun=0;HaplotypeScore=50.4713;InbreedingCoeff=0.6700;MQ=63.51;MQ0=3;MQRankSum=-0.262;QD=18.29;ReadPosRankSum=1.003;VQSLOD=2.0642;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:13:15:0,15,132	1/1:0,6:6:12.04:150,12,0	0/0:8,0:3:3.01:0,3,41	0/0:14,0:8:0.07:0,0,16	1/1:10,0:10:17.03:102,17,0	0/0:2,0:14:33.04:0,33,337	0/0:2,0:5:3:0,3,27	0/1:10,0:39:38.81:39,0,481	0/0:3,0:8:12:0,12,105	1/1:4,10:14:27.07:323,27,0	1/1:2,9:11:24.08:300,24,0	0/0:4,0:4:6.02:0,6,94	0/0:4,0:4:9.03:0,9,149	0/0:6,0:6:12.04:0,12,198	1/1:1,10:11:18.06:225,18,0	1/1:2,11:12:20.90:262,21,0	1/1:3,17:20:48.15:600,48,0	1/1:2,10:12:30.10:375,30,0	0/0:7,0:14:15.06:0,15,181	0/0:2,0:4:6:0,6,53	0/0:0,0:1:3:0,3,27	0/0:3,0:3:9.03:0,9,148	1/1:6,7:13:18.06:225,18,0	./.	0/1:7,0:7:16.31:16,0,19	1/1:2,7:9:21.07:263,21,0	1/1:3,8:11:12.04:150,12,0	1/1:0,14:14:36.11:445,36,0
chr10	11152515	.	GGC	G	1017.13	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=4.159;DP=242;FS=0.674;HRun=0;HaplotypeScore=43.2068;InbreedingCoeff=0.5726;MQ=77.28;MQ0=1;MQRankSum=-2.636;QD=14.33;ReadPosRankSum=2.129;VQSLOD=2.7559;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:31.29:0,31,161	0/0:1,0:1:2.99:0,3,24	0/0:8,0:4:3.01:0,3,37	0/0:11,0:7:4.24:0,4,32	0/1:2,0:2:0.05:0,0,7	0/0:11,0:11:29.71:0,30,137	0/0:10,0:10:28.23:0,28,149	1/1:7,8:15:27.01:278,27,0	0/0:8,0:8:19.97:0,20,107	0/0:10,0:10:17.98:0,18,220	0/0:3,0:3:2.53:0,3,49	0/0:14,0:14:39.41:0,39,207	0/1:4,0:4:4.54:5,0,13	0/0:10,0:10:22.37:0,22,133	0/0:7,0:7:17.86:0,18,207	0/0:3,0:3:6.01:0,6,100	0/0:11,0:11:33.02:0,33,461	0/0:13,0:13:35.80:0,36,446	1/1:0,4:4:12.03:133,12,0	1/1:5,0:5:6.90:66,7,0	1/1:10,28:38:63.06:682,63,0	0/1:3,0:3:0.16:0,0,38	0/0:2,0:2:2.97:0,3,21	0/0:6,0:6:17.94:0,18,185	0/0:9,0:9:17.12:0,17,89	0/0:6,0:6:8.88:0,9,71	0/0:10,0:10:29.73:0,30,341	0/0:6,0:6:15.01:0,15,196
chr10	11152517	.	CG	C	1506.23	PASS	AB=0.929;AC=31;AF=0.574;AN=54;BaseQRankSum=3.732;DP=231;FS=4.455;HRun=10;HaplotypeScore=36.5280;InbreedingCoeff=0.5913;MQ=74.67;MQ0=1;MQRankSum=-1.618;QD=8.86;ReadPosRankSum=1.541;VQSLOD=1.2118;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,10:12:26.99:234,27,0	./.	0/0:8,0:4:3:0,3,29	0/1:9,0:5:2.58:3,0,15	1/1:1,1:2:6:51,6,0	1/1:2,10:12:9.60:237,10,0	1/1:2,8:10:23.99:208,24,0	1/1:16,0:16:8.70:35,9,0	1/1:2,7:9:15:130,15,0	0/0:7,0:7:6:0,6,66	0/0:3,0:3:3.01:0,3,33	1/1:1,12:13:35.99:312,36,0	1/1:2,1:4:5.03:32,5,0	1/1:3,6:9:11.99:104,12,0	0/1:5,1:6:8.01:8,0,148	0/0:3,0:3:9.01:0,9,91	0/0:11,0:11:24.06:0,24,265	0/1:12,1:13:1.99:2,0,208	1/1:4,0:4:8.15:24,8,0	1/1:2,0:4:4.07:12,4,0	1/1:37,0:37:43.01:139,43,0	1/1:2,0:2:2.99:24,3,0	0/0:2,0:2:0:0,0,0	0/0:5,0:5:12.03:0,12,132	1/1:2,6:8:15:130,15,0	0/0:7,0:7:3:0,3,26	0/0:9,0:10:23.93:0,24,245	0/0:4,0:4:12.02:0,12,124
chr10	11154631	.	TAC	T	2904.90	PASS	AB=0.736;AC=32;AF=0.593;AN=54;BaseQRankSum=0.011;DP=758;FS=1.492;HRun=0;HaplotypeScore=106.6099;InbreedingCoeff=0.3091;MQ=56.18;MQ0=44;MQRankSum=1.961;QD=5.49;ReadPosRankSum=1.946;VQSLOD=3.2424;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:43:23.54:113,24,0	0/0:10,0:9:9.03:0,9,126	./.	0/0:52,0:18:0:0,0,0	0/1:17,0:16:22.80:23,0,171	0/1:13,1:20:6.55:71,0,7	1/1:15,0:33:25.73:137,26,0	0/0:17,0:17:5.96:0,6,35	0/1:9,20:32:62.89:136,0,63	1/1:11,8:19:13.24:165,13,0	1/1:6,7:12:18.04:192,18,0	0/0:28,0:29:6.74:0,7,89	0/0:20,0:31:23.77:0,24,235	0/0:12,0:22:5.68:0,6,63	1/1:13,19:33:26.90:272,27,0	0/1:19,14:33:2.69:176,0,3	0/1:20,14:33:18.17:226,0,18	1/1:11,9:22:6.18:148,6,0	1/1:20,0:17:8.02:52,8,0	1/1:3,7:10:17.63:174,18,0	0/1:39,26:63:8.13:97,0,8	0/0:22,0:20:11.65:0,12,122	0/1:6,8:14:8.06:98,0,8	1/1:12,18:32:32.43:308,32,0	1/1:14,0:28:5.68:28,6,0	0/1:20,6:25:3.40:167,0,3	1/1:9,10:19:11.79:132,12,0	1/1:0,11:11:33.09:362,33,0
chr10	11155415	.	G	GCTC	18280.32	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-16.225;DP=660;FS=3.759;HRun=0;HaplotypeScore=89.2960;InbreedingCoeff=0.9975;MQ=77.94;MQ0=0;MQRankSum=-4.034;QD=46.16;ReadPosRankSum=3.354;VQSLOD=6.5044;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,111,1687	1/1:3,6:9:18.06:386,18,0	0/0:23,0:21:23.35:0,23,537	0/0:25,0:26:55.61:0,56,798	1/1:0,23:23:48.12:985,48,0	0/0:25,0:25:69.23:0,69,1067	0/0:23,0:23:54.17:0,54,811	1/1:7,16:23:54.17:1111,54,0	0/0:27,0:27:69.23:0,69,1066	1/1:1,23:24:72.24:1495,72,0	1/1:3,22:25:51.18:1094,51,0	0/0:31,0:31:87.25:0,87,1277	0/0:21,0:21:57.19:0,57,880	0/0:19,0:19:51.14:0,51,744	1/1:3,11:15:21.07:451,21,0	1/1:2,29:32:78.24:1672,78,0	1/1:1,22:24:53.91:1112,54,0	1/1:1,8:9:24.08:515,24,0	1/1:8,14:22:39.13:837,39,0	1/1:1,20:24:51.11:1033,51,0	1/1:4,19:24:48.16:1031,48,0	0/0:26,0:26:69.21:0,69,1024	1/1:2,13:15:36.12:766,36,0	1/1:10,21:33:51.18:1095,51,0	1/1:5,22:27:60.21:1288,60,0	1/1:1,23:24:66.23:1416,66,0	1/1:6,17:23:45.15:962,45,0	1/1:1,18:19:48.16:1030,48,0
chr10	11155551	.	GTT	G	12044.95	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=6.416;DP=759;FS=4.711;HRun=10;HaplotypeScore=100.5434;InbreedingCoeff=0.9998;MQ=66.11;MQ0=6;MQRankSum=-1.000;QD=27.07;ReadPosRankSum=3.273;VQSLOD=4.9955;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,111,1751	1/1:2,13:15:39.10:432,39,0	0/0:24,0:24:54.99:0,55,695	0/0:19,0:18:29.18:0,29,388	0/0:2,0:23:55.28:0,55,206	0/0:29,0:29:87.29:0,87,1352	0/0:29,0:29:75.24:0,75,1169	1/1:5,25:28:66.10:715,66,0	0/0:20,0:20:57.18:0,57,870	1/1:1,24:25:72.19:802,72,0	1/1:2,19:21:54.13:602,54,0	0/0:29,0:32:83.49:0,83,1206	0/0:25,0:26:66.21:0,66,986	0/0:16,0:16:45.14:0,45,682	1/1:7,20:27:54.12:602,54,0	1/1:2,32:34:84.22:936,84,0	1/1:5,28:32:69.17:769,69,0	1/1:7,17:24:31.19:489,31,0	1/1:1,24:25:72.19:802,72,0	1/1:3,15:18:42.11:468,42,0	1/1:4,27:33:57.01:752,57,0	0/0:25,0:26:68.94:0,69,992	1/1:1,29:30:77.53:868,78,0	1/1:1,39:40:99:1268,114,0	0/0:3,0:26:57.77:0,58,204	1/1:2,26:28:78.21:870,78,0	1/1:6,33:39:96.24:1070,96,0	1/1:2,21:21:54.15:601,54,0
chr10	11156915	.	T	TG	15969.79	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-10.983;DP=559;FS=9.051;HRun=0;HaplotypeScore=53.6566;InbreedingCoeff=0.9978;MQ=84.63;MQ0=0;MQRankSum=-3.596;QD=43.75;ReadPosRankSum=3.184;VQSLOD=4.9187;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,126,1739	1/1:0,8:8:21.07:335,21,0	0/0:21,0:21:47.65:0,48,772	0/0:19,0:19:51.15:0,51,694	1/1:2,18:20:47.67:766,48,0	0/0:17,0:17:51.14:0,51,664	0/0:18,0:18:54.18:0,54,754	1/1:1,32:33:96.30:1480,96,0	0/0:18,0:18:54.18:0,54,754	1/1:0,16:16:48.16:767,48,0	1/1:0,11:11:24.08:384,24,0	0/0:14,0:14:42.13:0,42,571	0/0:19,0:19:57.19:0,57,796	0/0:11,0:11:33.11:0,33,462	1/1:0,35:35:99:1630,102,0	1/1:0,32:32:87.30:1391,87,0	1/1:0,42:42:99:1773,111,0	1/1:1,21:22:54.18:849,54,0	1/1:0,19:19:54.17:841,54,0	1/1:1,10:11:27.09:431,27,0	1/1:0,28:28:84.29:1343,84,0	0/0:15,0:15:45.15:0,45,629	1/1:0,10:10:27.09:431,27,0	1/1:0,15:15:45.15:719,45,0	1/1:0,8:8:24.08:383,24,0	1/1:1,27:28:81.28:1295,81,0	1/1:0,17:17:51.17:815,51,0	1/1:0,10:10:21.07:336,21,0
chr10	11157923	.	CACTG	C	305.21	PASS	AB=0.917;AC=15;AF=0.268;AN=56;BaseQRankSum=5.110;DP=296;FS=0.000;HRun=0;HaplotypeScore=143.3454;InbreedingCoeff=-0.0853;MQ=53.79;MQ0=4;MQRankSum=0.294;QD=2.06;ReadPosRankSum=-2.751;VQSLOD=2.0412;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:9,1:9:9.01:0,9,178	0/0:4,1:5:6.63:0,7,130	0/0:12,0:4:3.57:0,4,130	0/0:17,0:8:11.49:0,11,164	1/1:15,0:14:4.11:26,4,0	0/0:14,0:14:11.90:0,12,289	0/0:9,0:9:4.28:0,4,75	0/0:7,1:5:15.05:0,15,390	0/0:12,0:10:13.25:0,13,260	0/1:16,4:20:99:205,0,576	0/1:6,1:7:0.01:0,0,0	0/1:20,0:20:10.76:11,0,561	0/1:14,0:14:36.27:36,0,334	0/0:8,0:7:6.02:0,6,117	0/1:9,1:10:19.97:20,0,127	0/1:6,2:8:17.26:17,0,266	0/1:4,0:4:6.35:6,0,68	0/0:2,0:2:3.01:0,3,87	0/0:4,0:4:9.03:0,9,235	0/0:8,1:9:0.80:0,1,3	0/0:16,0:13:2.76:0,3,73	0/0:16,1:17:2.98:0,3,72	1/1:8,1:9:0.75:2,1,0	0/1:3,1:4:0.08:0,0,0	0/1:14,0:12:0.50:1,0,61	0/1:12,2:14:86.85:87,0,224	0/1:9,0:8:21.04:21,0,80	0/0:3,0:3:1.13:0,1,150
chr10	11157924	.	ACTG	A	297.86	PASS	AB=0.955;AC=18;AF=0.321;AN=56;BaseQRankSum=5.759;DP=303;FS=2.094;HRun=0;HaplotypeScore=144.7368;InbreedingCoeff=-0.1048;MQ=53.33;MQ0=4;MQRankSum=-2.026;QD=1.62;ReadPosRankSum=-1.690;VQSLOD=2.5843;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:9,1:9:8.82:0,9,126	0/0:5,0:5:8.17:0,8,127	0/1:12,0:5:0.91:1,0,134	0/1:18,0:8:6.69:7,0,119	1/1:12,3:14:1.91:15,2,0	0/0:14,1:15:11.67:0,12,231	0/0:9,0:9:4.52:0,5,52	0/0:7,1:5:15.05:0,15,313	0/1:10,2:10:14.19:14,0,202	0/1:20,0:20:99:185,0,588	0/1:7,0:7:0.18:0,0,0	0/1:19,1:20:2.58:3,0,457	0/1:12,2:14:73.35:73,0,261	0/0:8,0:7:6.02:0,6,87	0/0:10,0:10:3.28:0,3,116	0/1:9,0:9:0.50:0,0,268	0/0:3,1:4:2.30:0,2,53	0/0:2,0:2:2.56:0,3,70	0/0:5,0:5:12.03:0,12,225	0/0:8,1:9:0.42:0,0,3	0/0:16,0:13:2.88:0,3,43	0/0:18,0:18:2.88:0,3,48	1/1:9,0:9:1.55:5,2,0	1/1:4,0:4:0.47:1,0,0	0/1:13,3:14:0.01:0,0,59	0/1:14,0:14:95.68:96,0,193	0/1:9,0:8:11.74:12,0,49	0/1:3,0:3:5.95:6,0,106
chr10	11157933	.	ACGGG	A	1863.11	PASS	AB=0.924;AC=33;AF=0.589;AN=56;BaseQRankSum=4.341;DP=359;FS=13.382;HRun=0;HaplotypeScore=160.9544;InbreedingCoeff=-0.0073;MQ=53.35;MQ0=6;MQRankSum=-0.694;QD=6.58;ReadPosRankSum=-0.582;VQSLOD=2.0422;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:11,0:10:1.23:10,0,1	0/1:5,1:5:11.81:71,0,12	0/0:20,0:6:8.90:0,9,156	0/1:25,0:10:14.11:14,0,134	1/1:12,5:15:4.11:26,4,0	0/1:14,2:16:3.49:12,0,3	0/1:10,1:11:1.11:1,0,17	0/1:9,1:7:38.30:60,0,38	0/1:15,0:13:14.55:15,0,47	1/1:18,4:22:51.67:475,52,0	1/1:4,3:7:2.06:8,2,0	0/1:21,3:24:15.94:16,0,80	0/1:15,1:16:50.22:65,0,50	0/1:12,0:11:8.50:9,0,16	0/1:9,3:11:7.25:116,0,7	1/1:9,2:11:1:116,1,0	1/1:1,3:4:10.73:101,11,0	0/0:2,1:3:1.25:0,1,3	0/0:5,0:5:0.73:0,1,23	0/0:7,3:10:1.54:0,2,5	0/0:16,1:14:2.55:0,3,13	0/0:15,3:18:2.78:0,3,22	1/1:9,1:10:2.87:32,3,0	1/1:4,1:5:2.93:50,3,0	1/1:9,8:15:7.82:76,8,0	1/1:12,4:16:36.02:383,36,0	1/1:6,4:9:18.01:222,18,0	1/1:4,1:5:3:132,3,0
chr10	11157934	.	CGGG	C	795.88	PASS	AB=0.755;AC=24;AF=0.429;AN=56;BaseQRankSum=2.914;DP=345;FS=4.107;HRun=3;HaplotypeScore=161.0741;InbreedingCoeff=0.0387;MQ=54.11;MQ0=5;MQRankSum=-0.156;QD=3.75;ReadPosRankSum=-0.596;VQSLOD=-0.5918;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:7,2:8:4.19:0,4,37	0/0:3,1:5:4.12:0,4,38	0/0:23,0:6:16.86:0,17,227	0/0:26,0:10:7.92:0,8,148	1/1:11,3:15:1.91:15,2,0	0/0:12,3:16:8.06:0,8,54	0/1:7,3:10:0.52:1,0,18	0/1:6,1:6:13.66:14,0,38	0/1:9,3:13:15.88:16,0,54	0/1:7,8:20:5.64:334,0,6	0/1:5,1:6:0.18:0,0,0	0/1:23,1:24:4.13:4,0,132	0/1:9,2:16:59.49:60,0,59	0/1:5,1:11:9.65:10,0,16	0/0:7,3:11:3.71:0,4,57	0/1:5,4:11:15.82:16,0,61	0/1:4,0:4:6.48:6,0,15	0/0:3,0:3:2.46:0,2,15	0/0:4,0:4:6.25:0,6,32	0/1:5,3:10:0.53:1,0,2	0/0:15,0:12:2.61:0,3,12	0/0:12,3:16:2.47:0,2,21	1/1:3,2:10:3:26,3,0	1/1:2,1:5:3.22:13,3,0	1/1:12,1:14:5.02:26,5,0	1/1:6,7:15:10.40:324,10,0	0/1:5,2:9:12.98:34,0,13	1/1:1,1:5:8.04:45,8,0
chr10	11157944	.	CAA	C	487.34	PASS	AB=0.923;AC=16;AF=0.286;AN=56;BaseQRankSum=5.565;DP=509;FS=6.057;HRun=3;HaplotypeScore=198.0098;InbreedingCoeff=-0.2380;MQ=49.89;MQ0=23;MQRankSum=-0.520;QD=1.96;ReadPosRankSum=3.813;VQSLOD=-0.1510;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:11,2:11:8.16:0,8,61	0/1:7,1:6:5.18:5,0,86	0/0:45,1:10:15.56:0,16,144	0/1:50,0:13:21.25:21,0,81	0/0:22,1:21:8.32:0,8,83	0/0:18,3:20:21.19:0,21,265	0/1:11,1:12:6.15:6,0,141	0/0:17,1:16:3.61:0,4,454	0/1:14,3:15:1:1,0,172	0/1:22,4:26:83.65:220,0,84	0/0:14,1:14:3.65:0,4,24	0/0:27,1:28:45.56:0,46,543	0/1:18,1:19:13.07:13,0,302	0/0:14,1:15:25.65:0,26,214	0/1:14,2:14:7.82:8,0,177	0/1:10,2:12:18.94:19,0,166	0/1:6,0:6:0.21:0,0,78	0/1:5,0:5:3.22:3,0,61	0/0:10,0:9:27.01:0,27,333	0/1:15,2:14:12.29:12,0,44	0/0:21,0:15:11.32:0,11,98	0/0:20,2:21:34.27:0,34,273	0/1:15,1:15:9.45:9,0,49	0/0:9,1:8:3.46:0,3,21	0/0:17,1:16:5.59:0,6,64	0/1:22,4:25:99:250,0,105	0/1:13,0:10:26.08:26,0,102	1/1:4,1:5:4.49:33,4,0
chr10	11157967	.	AAC	A	636.67	PASS	AB=0.921;AC=14;AF=0.250;AN=56;BaseQRankSum=6.504;DP=694;FS=27.790;HRun=0;HaplotypeScore=206.2103;InbreedingCoeff=-0.1721;MQ=37.50;MQ0=54;MQRankSum=-3.295;QD=2.72;ReadPosRankSum=2.252;VQSLOD=1.3878;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:16:17.21:0,17,255	0/1:10,0:9:15.47:15,0,86	0/0:97,0:16:19.26:0,19,440	0/0:88,0:12:20.52:0,21,218	0/1:19,0:21:4.52:5,0,118	0/0:25,0:23:40.53:0,41,575	0/0:20,0:18:10.37:0,10,603	0/0:27,0:24:5.05:0,5,821	0/0:16,0:17:16.80:0,17,246	0/1:37,0:34:99:200,0,300	0/1:14,4:16:55.57:56,0,67	0/0:31,0:31:27.59:0,28,801	0/0:21,0:20:9.99:0,10,409	0/0:20,0:19:11.88:0,12,611	0/0:15,0:14:14.85:0,15,372	0/1:17,1:18:72.22:72,0,132	0/1:8,6:13:59.43:59,0,168	0/1:6,2:6:51.13:85,0,51	0/0:17,0:12:24.62:0,25,407	0/0:20,0:15:0.82:0,1,34	0/1:21,0:16:0.82:1,0,80	0/0:26,2:26:34.99:0,35,496	0/1:16,2:16:22.92:23,0,135	0/0:10,2:11:11.42:0,11,109	0/1:18,1:17:53.08:53,0,155	0/1:23,2:25:99:114,0,390	0/1:12,0:9:33.10:33,0,111	1/1:6,1:5:9.38:70,9,0
chr10	11157973	.	ACAC	A	249.86	PASS	AB=0.985;AC=12;AF=0.214;AN=56;BaseQRankSum=5.795;DP=733;FS=35.630;HRun=0;HaplotypeScore=218.3443;InbreedingCoeff=0.0260;MQ=36.20;MQ0=56;MQRankSum=-1.394;QD=1.24;ReadPosRankSum=-1.511;VQSLOD=1.3711;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:17:17.77:0,18,367	0/1:11,0:10:22.15:22,0,77	0/0:96,0:18:31.05:0,31,644	0/0:84,0:10:23.86:0,24,341	0/1:25,0:23:9.35:9,0,60	0/0:25,1:24:49.75:0,50,818	0/0:22,0:20:26.76:0,27,688	0/1:29,0:27:51.46:51,0,883	0/0:19,0:19:26.14:0,26,432	0/1:36,2:34:99:182,0,430	0/0:16,2:16:5.37:0,5,30	0/0:33,0:33:26.05:0,26,1022	0/0:23,0:22:23.10:0,23,675	0/0:22,0:19:39.40:0,39,810	0/1:17,0:16:13.73:14,0,292	0/0:19,0:19:9.11:0,9,355	0/1:14,0:13:2.55:3,0,226	0/0:9,1:8:11.10:0,11,180	0/0:18,0:14:1.95:0,2,447	1/1:23,0:17:4.74:52,5,0	0/0:24,0:18:2.06:0,2,67	0/0:30,0:28:4.69:0,5,442	0/0:16,2:15:8.81:0,9,149	0/0:15,0:13:17.39:0,17,270	0/1:23,0:20:0.79:1,0,230	0/0:35,0:33:0.99:0,1,895	0/1:12,1:10:23.19:23,0,304	1/1:6,2:6:6.07:30,6,0
chr10	11157978	.	ACACACAC	A	217.63	PASS	AB=0.987;AC=12;AF=0.214;AN=56;BaseQRankSum=2.963;DP=734;FS=3.259;HRun=0;HaplotypeScore=237.4142;InbreedingCoeff=-0.0236;MQ=35.51;MQ0=53;MQRankSum=-2.678;QD=0.91;ReadPosRankSum=-1.103;VQSLOD=2.2954;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:20:24.13:0,24,481	0/0:13,0:11:7.28:0,7,35	0/0:89,0:18:5.62:0,6,483	0/0:87,0:10:15.03:0,15,206	0/1:26,0:23:1.90:60,0,2	0/0:27,0:25:46.16:0,46,847	0/0:21,0:19:0.94:0,1,899	0/0:30,0:28:16.27:0,16,552	0/0:19,0:19:25.04:0,25,502	0/1:40,0:36:99:104,0,649	1/1:16,2:16:5.72:50,6,0	0/0:34,0:34:17.12:0,17,1466	0/1:22,0:21:37.82:38,0,651	0/1:22,0:19:24.27:24,0,1022	0/0:18,0:17:7.73:0,8,231	0/0:21,0:21:17.12:0,17,310	0/1:12,1:12:3.22:3,0,137	0/1:10,0:8:37.42:37,0,149	0/0:19,0:16:23.47:0,23,483	0/0:24,0:18:1.72:0,2,4	0/0:20,0:15:2.35:0,2,40	0/1:30,0:28:2.79:3,0,530	0/1:15,1:14:13.58:26,0,14	0/0:15,0:13:14.22:0,14,189	0/0:19,0:18:21.69:0,22,146	0/1:35,0:33:1.96:2,0,878	0/0:14,0:11:8.07:0,8,209	0/1:7,0:5:2.37:2,0,46
chr10	11157985	.	C	CCACACACACCA	3791.08	PASS	AB=0.924;AC=30;AF=0.536;AN=56;BaseQRankSum=3.763;DP=731;FS=41.274;HRun=0;HaplotypeScore=268.6564;InbreedingCoeff=0.2560;MQ=35.98;MQ0=49;MQRankSum=-4.151;QD=9.53;ReadPosRankSum=-2.071;VQSLOD=1.3349;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:21:26.56:0,27,380	1/1:11,0:9:4.24:49,4,0	0/0:85,0:17:15.41:0,15,205	0/0:78,0:8:14.46:0,14,133	1/1:23,0:22:4.08:47,4,0	0/0:26,0:24:35.91:0,36,525	0/0:23,0:21:22.75:0,23,704	0/1:24,0:24:99:134,0,177	0/0:18,0:18:13.77:0,14,249	0/1:37,1:35:99:603,0,201	1/1:15,0:16:8.77:312,9,0	0/0:35,0:36:54:0,54,1206	0/0:21,0:20:4.95:0,5,397	0/1:22,0:20:14.75:15,0,702	1/1:16,0:17:5.19:158,5,0	0/1:15,9:26:99:343,0,125	1/1:14,0:13:3.56:216,4,0	1/1:9,0:10:19.31:309,19,0	0/1:21,0:19:42.96:43,0,169	1/1:24,0:19:4.90:19,5,0	0/0:19,0:17:2.82:0,3,13	0/1:29,0:28:7.67:8,0,408	1/1:15,0:13:3.74:141,4,0	1/1:13,0:15:20.94:316,21,0	0/1:22,0:20:3.59:4,0,75	0/1:36,0:38:99:768,0,117	1/1:12,0:11:27.75:284,28,0	1/1:5,0:4:0.96:23,1,0
chr10	11158373	.	GA	G	1383.58	PASS	AB=0.944;AC=9;AF=0.161;AN=56;BaseQRankSum=7.921;DP=622;FS=2.508;HRun=12;HaplotypeScore=70.8027;InbreedingCoeff=0.8377;MQ=73.17;MQ0=2;MQRankSum=-0.408;QD=11.34;ReadPosRankSum=-0.546;VQSLOD=3.2798;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,2:42:65.72:0,66,956	0/0:4,0:4:12.02:0,12,122	0/1:16,1:15:2.48:2,0,123	0/0:22,0:18:16.71:0,17,163	0/0:24,0:24:51.56:0,52,512	0/0:14,1:15:6.83:0,7,251	0/0:24,2:26:10.64:0,11,471	1/1:10,21:35:15:444,15,0	0/0:28,0:28:40.06:0,40,571	0/0:25,0:25:60.11:0,60,606	0/0:18,1:19:27.82:0,28,448	0/0:19,0:19:34.86:0,35,330	0/0:13,0:13:30.01:0,30,278	0/0:20,0:20:24.52:0,25,390	0/0:42,0:42:89.27:0,89,903	0/0:24,2:26:7.11:0,7,414	0/0:21,1:25:45.37:0,45,580	0/0:18,0:19:44.19:0,44,462	1/1:9,13:24:15.43:282,15,0	1/1:2,11:13:29.88:232,30,0	1/1:6,26:33:74.52:579,75,0	0/0:17,0:19:39.86:0,40,373	0/0:17,1:19:30.49:0,30,456	0/0:24,1:28:51.58:0,52,675	0/0:14,0:14:33.06:0,33,331	0/0:17,1:18:18.67:0,19,351	0/0:25,1:26:24.84:0,25,417	0/0:6,0:6:16.58:0,17,151
chr10	11159586	.	A	ATT	3571.04	PASS	AB=0.616;AC=31;AF=0.554;AN=56;BaseQRankSum=7.113;DP=462;FS=2.103;HRun=11;HaplotypeScore=72.7702;InbreedingCoeff=0.4736;MQ=68.43;MQ0=5;MQRankSum=-0.712;QD=10.60;ReadPosRankSum=-0.526;VQSLOD=1.6608;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:23:44.42:0,44,394	0/1:2,0:10:11.12:33,0,11	0/1:34,0:18:5.27:5,0,77	0/0:34,0:8:2.55:0,3,22	1/1:1,16:17:42.06:559,42,0	0/0:23,0:25:71.58:0,72,658	0/0:6,0:6:12.01:0,12,116	1/1:10,1:27:57.69:455,58,0	0/0:6,0:6:18.03:0,18,175	1/1:3,0:16:32.44:111,32,0	1/1:2,0:19:32.13:139,32,0	0/0:11,0:11:27.02:0,27,255	0/0:6,0:6:15.02:0,15,145	0/0:11,0:11:33.05:0,33,320	0/1:2,0:9:13.62:27,0,14	0/1:1,0:10:15.22:15,0,19	1/1:7,0:36:64.20:219,64,0	0/1:9,0:32:28.61:112,0,29	1/1:7,0:22:50.92:455,51,0	1/1:6,0:22:47.98:451,48,0	1/1:1,0:8:14.92:123,15,0	0/0:3,0:3:5.98:0,6,52	0/1:2,0:11:7.96:27,0,8	1/1:1,0:10:9.98:34,10,0	1/1:2,14:17:39.13:565,39,0	1/1:2,1:17:35.33:155,35,0	1/1:5,0:13:17.34:60,17,0	0/1:1,0:7:16.01:23,0,16
chr10	11161271	.	GA	G	1508.42	PASS	AB=0.586;AC=7;AF=0.125;AN=56;BaseQRankSum=7.285;DP=705;FS=2.047;HRun=10;HaplotypeScore=76.8968;InbreedingCoeff=0.8354;MQ=72.14;MQ0=1;MQRankSum=0.335;QD=17.96;ReadPosRankSum=0.798;VQSLOD=4.4127;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:78.68:0,79,1015	0/0:9,0:9:24.06:0,24,265	0/0:22,0:18:33.32:0,33,389	0/0:18,0:16:29.80:0,30,299	0/0:5,0:36:77.32:0,77,396	0/0:31,1:32:64.17:0,64,927	0/0:21,1:22:31.14:0,31,561	0/0:29,0:29:49.26:0,49,770	0/0:23,2:25:43.23:0,43,692	0/0:27,0:27:72.19:0,72,790	0/0:23,1:24:39.78:0,40,625	1/1:6,16:23:47.02:396,47,0	1/1:1,24:25:65.97:572,66,0	1/1:0,19:19:50.99:443,51,0	0/0:26,0:26:69.08:0,69,722	0/0:33,0:34:90.05:0,90,958	0/0:30,1:33:68.45:0,68,935	0/0:25,0:25:64.68:0,65,681	0/0:16,0:16:39.11:0,39,431	0/0:32,0:35:89.82:0,90,910	0/0:25,0:25:68.98:0,69,720	0/1:5,12:17:27.39:246,0,27	0/0:26,2:28:46.12:0,46,728	0/0:19,0:19:51.14:0,51,564	0/0:5,0:20:22.73:0,23,114	0/0:32,0:32:67.25:0,67,962	0/0:23,0:22:63.17:0,63,697	0/0:20,0:20:60.15:0,60,653
chr10	11162287	.	C	CTT	4455.95	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=-5.781;DP=469;FS=4.099;HRun=11;HaplotypeScore=55.2428;InbreedingCoeff=0.9301;MQ=69.05;MQ0=4;MQRankSum=-1.542;QD=18.41;ReadPosRankSum=0.432;VQSLOD=3.5452;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:35:59.82:0,60,664	1/1:1,3:5:11.53:139,12,0	0/0:7,0:8:12.94:0,13,66	0/0:13,0:10:14.62:0,15,109	0/0:19,0:19:29.82:0,30,291	0/0:14,0:17:26.62:0,27,337	0/0:26,0:26:66.01:0,66,620	0/0:20,0:20:32.92:0,33,315	0/0:13,0:14:33.21:0,33,304	1/1:4,14:19:35.58:450,36,0	1/1:2,5:6:12:150,12,0	1/1:8,1:21:17.77:186,18,0	1/1:3,1:12:6.01:72,6,0	1/1:5,1:11:6.01:72,6,0	1/1:2,9:14:20.56:269,21,0	1/1:6,15:23:27.09:376,27,0	1/1:9,27:37:47.73:687,48,0	1/1:4,15:20:32.60:441,33,0	0/0:18,0:18:27.85:0,28,264	0/0:8,0:9:14.73:0,15,128	0/0:33,0:33:68.97:0,69,662	1/1:2,1:7:9.02:110,9,0	1/1:2,9:13:12.04:174,12,0	1/1:2,13:15:29.59:400,30,0	0/0:12,0:13:29.72:0,30,264	1/1:6,15:21:41.98:518,42,0	1/1:2,11:13:21.07:304,21,0	1/1:0,3:3:8.99:106,9,0
chr10	11164024	.	G	GT	727.39	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=0.100;DP=742;FS=0.000;HRun=2;HaplotypeScore=144.4881;InbreedingCoeff=0.9958;MQ=82.45;MQ0=1;MQRankSum=-3.205;QD=18.65;ReadPosRankSum=-1.117;VQSLOD=3.1245;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:25:59.72:0,60,521	0/0:8,0:8:23.82:0,24,219	0/0:28,0:28:55.40:0,55,813	0/0:24,0:24:20.18:0,20,418	1/1:8,16:24:28.31:503,28,0	0/0:28,0:28:74.93:0,75,664	0/0:23,0:23:61.93:0,62,571	0/0:30,0:30:86.89:0,87,847	0/0:28,0:28:67.18:0,67,576	0/0:26,0:25:63.43:0,63,659	0/0:35,0:35:93:0,93,735	0/0:32,0:32:76.13:0,76,722	0/0:25,0:25:69:0,69,653	0/0:17,0:17:44.89:0,45,374	0/0:37,0:37:99:0,99,696	0/0:34,0:34:94.78:0,95,728	0/0:25,0:25:68.21:0,68,552	0/0:23,0:23:63.79:0,64,404	0/0:21,0:21:59.77:0,60,592	0/0:22,0:22:55.13:0,55,511	0/0:33,0:33:83.75:0,84,780	0/0:29,0:29:65.03:0,65,585	0/0:26,0:26:65.02:0,65,554	0/0:34,0:34:91.76:0,92,757	1/1:4,11:15:33.46:345,33,0	0/0:34,0:34:50.18:0,50,652	0/0:31,0:31:78.45:0,78,621	0/0:24,0:24:57.57:0,58,527
chr10	11164025	.	G	GTT	12207.09	PASS	AB=0.609;AC=49;AF=0.875;AN=56;BaseQRankSum=-0.318;DP=779;FS=5.327;HRun=9;HaplotypeScore=131.7272;InbreedingCoeff=0.4817;MQ=81.56;MQ0=1;MQRankSum=-6.628;QD=16.84;ReadPosRankSum=5.097;VQSLOD=2.3834;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,23:31:43.80:788,44,0	0/1:4,0:8:18.81:21,0,19	0/0:28,0:29:52.44:0,52,572	0/0:24,0:24:32.73:0,33,321	1/1:26,0:26:19.48:382,19,0	1/1:2,26:28:69.23:1062,69,0	1/1:7,15:23:59.52:842,60,0	1/1:10,1:32:68.65:654,69,0	1/1:1,27:28:63.21:970,63,0	1/1:6,0:25:49.78:170,50,0	1/1:8,0:35:33.95:202,34,0	1/1:6,27:35:63.17:942,63,0	1/1:5,20:26:57.19:849,57,0	1/1:1,18:20:42.14:647,42,0	1/1:4,0:37:74.86:257,75,0	1/1:7,0:36:7.03:159,7,0	1/1:5,0:24:11.51:125,12,0	1/1:1,0:23:49.52:170,50,0	1/1:6,2:23:55.62:544,56,0	1/1:2,2:27:67.34:669,67,0	1/1:8,3:37:69.09:697,69,0	1/1:4,24:31:80.06:1018,80,0	1/1:7,0:27:11.01:105,11,0	0/1:9,0:34:23.48:124,0,23	1/1:16,0:16:41.30:304,41,0	1/1:5,0:36:71.83:276,72,0	0/1:9,0:31:45.60:100,0,46	1/1:8,0:24:37.31:128,37,0
chr10	11164089	.	ATTC	A	1709.42	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=1.155;DP=775;FS=2.943;HRun=0;HaplotypeScore=151.0003;InbreedingCoeff=0.9898;MQ=79.82;MQ0=1;MQRankSum=-4.748;QD=34.89;ReadPosRankSum=3.696;VQSLOD=4.5694;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:32:67.37:0,67,1519	0/0:6,0:6:15.05:0,15,331	0/0:22,0:22:48.16:0,48,979	0/0:18,0:18:39.03:0,39,769	1/1:3,23:26:57.19:915,57,0	0/0:25,0:25:72.25:0,72,1590	0/0:25,0:25:72.25:0,72,1583	0/0:33,0:33:87.30:0,87,1919	0/0:29,0:29:69.24:0,69,1478	0/0:35,0:35:93.32:0,93,2050	0/0:24,0:24:60.21:0,60,1296	0/0:35,0:35:81.28:0,81,1767	0/0:22,0:22:60.21:0,60,1323	0/0:30,0:30:75.26:0,75,1649	0/0:33,0:33:90.31:0,90,1959	0/0:40,0:40:99:0,105,2315	0/0:27,0:27:69.24:0,69,1523	0/0:19,0:19:54.19:0,54,1192	0/0:24,0:24:60.21:0,60,1304	0/0:31,0:31:84.29:0,84,1796	0/0:40,0:40:99:0,102,2201	0/0:34,0:34:93.32:0,93,2024	0/0:24,0:24:63.22:0,63,1387	0/0:28,0:28:75.26:0,75,1647	1/1:3,20:23:57.19:916,57,0	0/0:43,0:43:99:0,123,2712	0/0:35,0:35:99:0,99,2182	0/0:11,0:11:21.07:0,21,463
chr10	11165777	.	T	TAA	8328.87	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-11.181;DP=618;FS=0.000;HRun=10;HaplotypeScore=76.1070;InbreedingCoeff=0.9981;MQ=76.24;MQ0=2;MQRankSum=-1.433;QD=31.67;ReadPosRankSum=1.449;VQSLOD=5.1918;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:35:86.83:0,87,850	1/1:2,6:9:18.06:269,18,0	0/0:23,0:19:32.24:0,32,288	0/0:16,0:17:35.18:0,35,299	0/0:22,0:23:59.84:0,60,585	0/0:25,0:26:59.80:0,60,591	0/0:22,0:24:50.53:0,51,537	0/0:17,0:17:36.06:0,36,366	0/0:19,0:20:53.81:0,54,524	1/1:4,13:20:44.12:583,44,0	1/1:1,7:9:26.02:306,26,0	0/0:25,0:26:74.80:0,75,717	0/0:21,0:22:50.82:0,51,500	0/0:27,0:28:62.80:0,63,622	1/1:3,29:33:67.09:1074,67,0	1/1:4,21:26:59.65:834,60,0	1/1:1,27:27:74.92:1085,75,0	1/1:1,12:13:35.61:500,36,0	0/0:19,0:19:45.09:0,45,458	0/0:10,0:10:30.07:0,30,305	0/0:23,0:25:50.57:0,51,623	0/0:24,0:25:59.83:0,60,586	1/1:4,9:16:27.09:387,27,0	1/1:7,22:36:74.66:907,75,0	0/0:15,0:15:42.09:0,42,421	1/1:3,23:26:71.73:1031,72,0	1/1:3,26:30:68.72:993,69,0	1/1:6,8:14:24.08:358,24,0
chr10	11166870	.	TTTTTTG	T	1339.61	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=7.760;DP=663;FS=7.871;HRun=0;HaplotypeScore=134.3026;InbreedingCoeff=0.9370;MQ=70.10;MQ0=0;MQRankSum=-5.065;QD=13.95;ReadPosRankSum=-3.028;VQSLOD=1.4991;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:45.15:0,45,1416	0/0:11,0:11:15.05:0,15,467	0/0:25,0:21:20.26:0,20,530	0/0:24,0:20:30.44:0,30,827	0/0:26,0:26:54.18:0,54,1622	0/0:30,0:30:66.23:0,66,2102	0/0:23,0:23:51.16:0,51,1567	1/1:23,9:32:27.08:474,27,0	0/0:27,0:27:54.19:0,54,1723	0/0:30,0:30:69.23:0,69,2118	0/0:27,0:27:51.17:0,51,1639	0/0:20,0:20:57.19:0,57,1853	0/0:28,0:28:57.19:0,57,1823	0/0:25,0:25:39.10:0,39,1183	0/0:24,0:24:48.16:0,48,1509	0/0:23,0:23:51.16:0,51,1542	0/0:23,0:23:51.17:0,51,1635	0/0:17,0:17:42.14:0,42,1363	1/1:25,6:31:18.05:336,18,0	1/1:10,12:22:27.09:558,27,0	1/1:8,3:11:5.98:124,6,0	0/0:22,0:22:51.16:0,51,1564	0/0:25,0:25:60.17:0,60,1639	0/0:8,0:8:12.04:0,12,390	0/0:25,0:25:66.14:0,66,2063	0/0:49,0:49:99:0,105,3215	0/0:33,0:32:72.21:0,72,2032	0/0:4,0:4:9.03:0,9,248
chr10	11167628	.	CT	C	4924.75	PASS	AB=0.734;AC=28;AF=0.500;AN=56;BaseQRankSum=7.254;DP=648;FS=1.472;HRun=12;HaplotypeScore=75.6116;InbreedingCoeff=0.8192;MQ=65.38;MQ0=0;MQRankSum=-0.779;QD=14.74;ReadPosRankSum=3.215;VQSLOD=5.7502;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,118,1135	1/1:2,4:7:13.98:99,14,0	0/0:14,1:14:0.67:0,1,158	0/1:13,1:13:2.70:3,0,121	1/1:8,16:25:22.40:347,22,0	0/0:19,0:20:44.92:0,45,440	0/0:18,0:18:48.10:0,48,487	0/0:25,3:28:7.58:0,8,420	0/0:27,1:28:42.10:0,42,581	1/1:4,25:29:74.70:580,75,0	1/1:6,11:17:32.86:255,33,0	0/0:25,1:28:42.54:0,43,564	0/0:16,2:18:6.82:0,7,243	0/0:20,0:21:47.76:0,48,429	1/1:7,20:27:47.74:371,48,0	1/1:5,19:24:23.81:365,24,0	1/1:4,24:29:62.26:471,62,0	1/1:1,14:15:32.85:255,33,0	0/0:19,1:21:15.79:0,16,324	0/0:17,0:18:38.02:0,38,393	0/0:22,1:24:27.05:0,27,489	0/0:25,1:29:20.49:0,20,374	1/1:4,19:24:58.80:447,59,0	1/1:5,25:36:31.84:484,32,0	0/1:5,12:17:28.09:170,0,28	1/1:6,16:23:19.20:314,19,0	1/1:5,23:28:38.27:480,38,0	1/1:3,14:18:37.87:284,38,0
chr10	11167818	.	A	AT	9924.56	PASS	AC=52;AF=1.000;AN=52;BaseQRankSum=1.063;DP=295;FS=0.000;HRun=1;HaplotypeScore=146.3946;InbreedingCoeff=-0.0236;MQ=30.64;MQ0=0;MQRankSum=-1.673;QD=33.87;ReadPosRankSum=1.717;VQSLOD=4.5008;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,16:22:51.17:748,51,0	1/1:0,1:1:3.01:45,3,0	./.	./.	1/1:3,8:11:25.86:336,26,0	1/1:2,4:6:18.06:268,18,0	1/1:2,3:5:12.04:177,12,0	1/1:1,5:6:18.06:269,18,0	1/1:4,14:18:54.17:763,54,0	1/1:1,11:12:21.85:380,22,0	1/1:2,7:9:21:285,21,0	1/1:2,16:18:51.17:762,51,0	1/1:5,4:9:12.04:180,12,0	1/1:2,8:10:9.02:106,9,0	1/1:2,11:13:36.12:523,36,0	1/1:4,13:17:51.09:698,51,0	1/1:6,7:13:30.06:412,30,0	1/1:1,4:5:12.04:180,12,0	1/1:2,5:7:18.04:248,18,0	1/1:1,17:19:57.19:846,57,0	1/1:3,2:5:9.03:130,9,0	1/1:5,15:20:57.19:849,57,0	1/1:3,14:17:3.01:30,3,0	1/1:5,6:11:9.02:105,9,0	1/1:0,9:9:27.09:388,27,0	1/1:4,9:13:36.12:521,36,0	1/1:3,6:9:24.04:332,24,0	1/1:0,8:8:24.08:344,24,0
chr10	11167820	.	C	CA	1550.01	PASS	AC=50;AF=1.000;AN=50;BaseQRankSum=2.023;DP=225;FS=0.000;HRun=1;HaplotypeScore=149.2461;InbreedingCoeff=0.0888;MQ=30.74;MQ0=0;MQRankSum=1.170;QD=7.31;ReadPosRankSum=2.307;VQSLOD=0.7939;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,16:16:37.90:129,38,0	1/1:0,1:1:2.50:9,2,0	./.	./.	1/1:0,8:8:4.48:45,4,0	1/1:0,4:4:9.98:36,10,0	1/1:0,3:3:7.49:27,7,0	1/1:0,5:5:6.85:17,7,0	1/1:0,14:14:34.94:132,35,0	1/1:11,0:11:17.11:53,17,0	1/1:1,7:8:10.59:63,11,0	1/1:0,16:16:40.50:167,40,0	1/1:0,4:4:9.81:35,10,0	1/1:8,0:8:2.60:10,3,0	1/1:1,11:12:26.87:95,27,0	1/1:0,13:13:31.39:109,31,0	1/1:0,7:7:15.33:68,15,0	1/1:0,4:4:7.71:22,8,0	1/1:0,5:5:5.10:13,5,0	1/1:0,18:18:43.50:170,43,0	1/1:0,2:2:4.72:16,5,0	1/1:0,15:15:39.24:166,39,0	./.	1/1:6,0:6:2.96:19,3,0	1/1:0,9:9:21.60:78,22,0	1/1:0,9:9:13.89:44,14,0	1/1:0,6:6:14.70:52,15,0	1/1:0,8:8:16.29:50,16,0
chr10	11170117	.	T	TTTTC	8237.07	PASS	AB=0.786;AC=41;AF=0.732;AN=56;BaseQRankSum=0.531;DP=548;FS=18.674;HRun=0;HaplotypeScore=97.1986;InbreedingCoeff=-0.0646;MQ=52.99;MQ0=23;MQRankSum=-2.583;QD=16.74;ReadPosRankSum=4.577;VQSLOD=3.1669;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,21:38:14.24:885,14,0	1/1:1,9:13:14.95:282,15,0	0/0:31,0:7:8.35:0,8,76	0/0:25,0:7:2.48:0,2,28	0/1:20,0:20:74.28:138,0,74	0/1:9,7:17:16.46:341,0,16	1/1:13,11:26:30.05:541,30,0	0/1:25,0:24:10.48:174,0,10	0/1:5,8:20:9.60:291,0,10	1/1:5,12:21:17.26:390,17,0	1/1:6,6:19:20.77:276,21,0	0/1:18,0:18:7.57:206,0,8	0/1:11,1:11:20.72:194,0,21	0/1:11,5:18:33.48:322,0,33	1/1:4,12:15:14.97:341,15,0	1/1:5,7:17:27:441,27,0	0/1:13,15:31:39.35:265,0,39	1/1:10,11:24:31.20:671,31,0	0/1:8,15:24:6.41:419,0,6	1/1:5,5:12:15.52:141,16,0	1/1:12,0:13:14.63:119,15,0	1/1:0,5:7:5.99:136,6,0	1/1:9,0:9:11.67:135,12,0	1/1:3,9:19:27.02:473,27,0	0/1:9,0:9:48.60:175,0,49	1/1:8,7:17:29.30:425,29,0	0/1:9,10:27:10.09:342,0,10	1/1:5,4:8:10.03:114,10,0
chr10	11170127	.	C	CTTTTT	13431.84	PASS	AB=0.931;AC=49;AF=0.875;AN=56;BaseQRankSum=-4.108;DP=438;FS=0.000;HRun=4;HaplotypeScore=99.9543;InbreedingCoeff=0.4321;MQ=49.96;MQ0=20;MQRankSum=-2.817;QD=33.17;ReadPosRankSum=0.194;VQSLOD=0.9957;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:27,2:29:60.10:1127,60,0	1/1:11,0:11:18.02:328,18,0	0/0:18,0:4:8.63:0,9,63	0/0:14,0:3:5.49:0,5,34	1/1:7,8:19:32.88:465,33,0	1/1:18,1:17:36.07:634,36,0	1/1:21,1:20:48:876,48,0	1/1:21,0:19:35.25:439,35,0	1/1:15,0:16:33.08:587,33,0	1/1:18,0:17:39.12:641,39,0	1/1:12,1:11:27.02:421,27,0	0/1:14,0:13:14.29:415,0,14	1/1:9,1:9:24.07:449,24,0	0/1:13,3:16:9.75:425,0,10	1/1:12,1:12:18.05:386,18,0	1/1:21,1:22:39.10:679,39,0	0/1:19,1:20:2.46:650,0,2	1/1:23,1:24:54.06:971,54,0	1/1:15,0:14:38.86:676,39,0	1/1:10,0:9:14.93:192,15,0	1/1:10,0:10:17.96:185,18,0	1/1:5,0:5:9.02:166,9,0	1/1:4,1:5:12.04:229,12,0	1/1:16,1:17:36.11:750,36,0	1/1:3,8:15:18.06:465,18,0	1/1:10,2:11:33.09:603,33,0	1/1:20,0:20:22.10:542,22,0	1/1:8,0:6:6.02:132,6,0
chr10	11170471	.	A	AT	2836.37	PASS	AB=0.792;AC=12;AF=0.214;AN=56;BaseQRankSum=-9.703;DP=486;FS=9.864;HRun=11;HaplotypeScore=49.5198;InbreedingCoeff=0.7538;MQ=68.68;MQ0=1;MQRankSum=-0.872;QD=19.70;ReadPosRankSum=2.332;VQSLOD=4.3867;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,17:18:30.91:494,31,0	0/0:6,0:6:11.93:0,12,93	0/0:20,0:15:23.24:0,23,243	0/1:17,0:12:19.77:20,0,73	1/1:5,28:33:38.50:725,38,0	1/1:0,17:17:51.10:518,51,0	0/1:4,9:14:36.69:195,0,37	0/0:27,0:27:50.77:0,51,395	1/1:1,15:16:39.08:396,39,0	0/0:22,0:22:47.79:0,48,369	0/0:16,0:17:40.86:0,41,304	0/0:15,0:15:41.84:0,42,325	0/0:14,0:14:35.85:0,36,279	0/0:16,0:16:41.82:0,42,325	0/0:11,0:11:24.76:0,25,184	0/0:18,1:19:23.35:0,23,364	0/0:26,0:28:63.81:0,64,476	0/0:15,0:15:35.86:0,36,279	0/0:23,0:23:49.58:0,50,373	0/0:20,0:20:50.80:0,51,395	0/0:2,0:2:5.98:0,6,46	0/0:5,0:5:14.94:0,15,116	0/0:17,0:17:44.82:0,45,348	0/0:10,0:10:17.90:0,18,139	1/1:3,26:29:66.13:670,66,0	0/0:21,0:21:50.78:0,51,395	0/0:25,0:24:62.75:0,63,487	0/0:9,0:9:11.95:0,12,93
chr10	11171183	.	AACACACACACAC	A	6858.62	PASS	AB=0.755;AC=24;AF=0.429;AN=56;BaseQRankSum=7.859;DP=631;FS=32.982;HRun=0;HaplotypeScore=205.1533;InbreedingCoeff=0.6585;MQ=65.76;MQ0=17;MQRankSum=-8.107;QD=24.67;ReadPosRankSum=0.993;VQSLOD=2.7982;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:39:29.64:0,30,604	1/1:4,2:6:6.02:178,6,0	0/0:40,0:26:8.99:0,9,208	0/0:33,0:22:9.03:0,9,223	0/0:13,0:20:27.09:0,27,1243	0/1:7,0:14:31.73:32,0,81	0/0:21,0:33:33.08:0,33,515	0/0:29,0:27:36.08:0,36,1229	0/1:18,0:21:15.68:16,0,370	1/1:9,14:23:36.10:1073,36,0	1/1:12,6:19:9.03:303,9,0	0/0:19,0:23:40.85:0,41,1941	0/0:10,0:12:19.88:0,20,972	0/0:16,0:16:36.11:0,36,1756	1/1:14,19:35:39.60:1308,40,0	1/1:8,7:18:20.86:666,21,0	0/1:12,7:20:12.96:178,0,13	1/1:10,1:10:5.97:124,6,0	0/0:13,0:14:18.06:0,18,797	0/0:11,0:15:18.06:0,18,823	0/0:29,0:33:60.18:0,60,2987	0/0:16,0:16:24.05:0,24,987	1/1:11,9:21:20.86:621,21,0	0/1:17,8:23:10.14:198,0,10	0/0:16,0:27:24.07:0,24,1039	1/1:15,10:27:29.07:771,29,0	1/1:10,14:27:28.63:952,29,0	1/1:2,4:8:15.05:439,15,0
chr10	11172215	.	TGG	T	16167.47	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-8.725;DP=685;FS=26.773;HRun=10;HaplotypeScore=98.8615;InbreedingCoeff=0.9892;MQ=69.98;MQ0=1;MQRankSum=-4.926;QD=26.16;ReadPosRankSum=4.364;VQSLOD=2.9451;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,37:45:93.22:1037,93,0	1/1:0,11:11:27.07:301,27,0	0/0:19,0:20:26.27:0,26,432	0/0:12,0:12:21.06:0,21,297	0/0:3,0:17:29.94:0,30,103	1/1:2,23:25:62.30:701,62,0	1/1:4,21:25:54.14:602,54,0	1/1:7,14:22:35.80:380,36,0	1/1:0,12:12:36.10:401,36,0	1/1:3,25:28:75.17:825,75,0	1/1:5,13:18:33.07:368,33,0	1/1:3,26:29:66.17:736,66,0	1/1:0,26:26:69.19:769,69,0	1/1:4,30:33:84.21:936,84,0	1/1:1,32:34:75.11:894,75,0	1/1:1,23:24:63.17:702,63,0	1/1:3,26:29:66.16:736,66,0	1/1:3,24:27:57.15:635,57,0	1/1:5,13:18:33.05:367,33,0	1/1:0,24:24:60.14:669,60,0	1/1:2,44:46:99:1350,123,0	1/1:3,22:25:60.15:669,60,0	1/1:1,23:24:53.73:602,54,0	1/1:2,38:40:93.24:1037,93,0	0/0:6,0:18:29.82:0,30,103	1/1:2,23:25:69.15:752,69,0	1/1:3,20:23:49.86:567,50,0	1/1:0,4:4:12.03:134,12,0
chr10	11172363	.	CGTGTGTGTGTGTGTGT	C	10650.47	PASS	AB=0.733;AC=36;AF=0.667;AN=54;BaseQRankSum=6.537;DP=678;FS=3.461;HRun=0;HaplotypeScore=261.9043;InbreedingCoeff=0.3293;MQ=58.58;MQ0=15;MQRankSum=-4.538;QD=22.52;ReadPosRankSum=1.592;VQSLOD=3.0083;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:22,23:47:7.57:269,8,0	1/1:5,9:14:15.05:516,15,0	0/0:44,0:13:5.99:0,6,75	0/0:40,0:16:9.03:0,9,212	0/0:17,0:25:12.02:0,12,257	1/1:8,9:19:10.59:343,11,0	./.	0/1:18,0:18:10.64:11,0,149	1/1:7,10:17:12.04:522,12,0	1/1:12,9:22:21.07:782,21,0	1/1:5,16:23:26.66:779,27,0	0/1:8,0:22:27.83:179,0,28	1/1:5,0:17:29.81:326,30,0	0/1:10,0:30:34.85:157,0,35	1/1:4,19:23:12.01:531,12,0	1/1:2,17:19:15.05:664,15,0	0/1:10,22:33:58.03:471,0,58	1/1:10,0:12:15.05:361,15,0	0/1:17,1:18:82.13:121,0,82	1/1:10,1:25:9.10:288,9,0	0/0:20,0:30:0.75:0,1,20	0/1:15,0:32:99:124,0,144	1/1:8,12:20:12.08:353,12,0	0/0:14,12:28:4.81:0,5,58	0/0:12,0:18:5.64:0,6,266	1/1:10,18:28:51.15:1986,51,0	1/1:18,6:29:59.99:1703,60,0	1/1:5,0:5:9.03:165,9,0
chr10	11175313	.	C	CGGAGAGGAACG	59798.91	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-8.244;DP=689;FS=10.272;HRun=0;HaplotypeScore=155.4232;InbreedingCoeff=0.9967;MQ=75.14;MQ0=0;MQRankSum=-13.513;QD=100.00;ReadPosRankSum=2.170;VQSLOD=4.3504;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,13:38:60.21:3053,60,0	1/1:2,3:8:21.07:950,21,0	0/0:22,0:22:59.08:0,59,1238	0/0:23,0:22:59.35:0,59,1596	0/0:20,0:20:57.18:0,57,1904	1/1:3,4:17:24.08:1124,24,0	1/1:4,17:36:66.23:3554,66,0	1/1:12,9:32:90.27:3990,90,0	1/1:2,19:31:63.05:3607,63,0	1/1:3,14:26:72.24:3723,72,0	1/1:2,6:15:24.08:1138,24,0	1/1:5,17:27:66.23:3687,66,0	1/1:5,27:44:99:5729,102,0	1/1:6,10:25:45.15:2292,45,0	1/1:4,12:27:45.63:2402,46,0	1/1:1,14:31:39.61:2251,40,0	1/1:5,10:16:30.10:1473,30,0	1/1:6,9:25:36.12:2018,36,0	1/1:5,5:20:57.14:1968,57,0	1/1:3,10:14:33.11:1878,33,0	1/1:4,9:31:26.14:1061,26,0	1/1:4,10:21:39.13:2084,39,0	1/1:3,12:22:39.61:2135,40,0	1/1:2,8:23:27.09:1516,27,0	0/0:26,0:26:78.26:0,78,2741	1/1:6,13:29:84.22:3654,84,0	1/1:7,10:21:51.18:2659,51,0	1/1:1,10:18:33.11:1851,33,0
chr10	11176340	.	ATTCT	A	9071.84	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=8.699;DP=449;FS=9.468;HRun=0;HaplotypeScore=142.5370;InbreedingCoeff=0.7973;MQ=65.88;MQ0=4;MQRankSum=-6.043;QD=24.13;ReadPosRankSum=-0.776;VQSLOD=3.7886;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,21:29:20.49:866,20,0	1/1:10,0:10:11.97:122,12,0	0/0:18,0:13:10.13:0,10,149	0/0:11,0:8:8.95:0,9,144	0/0:18,0:18:50.38:0,50,1142	1/1:3,19:22:54.18:876,54,0	1/1:6,9:15:30.10:476,30,0	1/1:14,0:14:8.99:77,9,0	1/1:3,11:14:30.10:487,30,0	1/1:19,0:19:45.08:499,45,0	1/1:21,0:21:51.15:601,51,0	1/1:6,7:13:21.07:330,21,0	1/1:11,2:13:15.04:197,15,0	1/1:1,3:4:9.03:150,9,0	1/1:25,0:25:48.14:559,48,0	1/1:19,0:18:42.13:510,42,0	1/1:17,0:17:24.07:276,24,0	1/1:6,0:6:1.21:92,1,0	1/1:20,0:19:30.01:309,30,0	1/1:16,0:16:36.11:421,36,0	1/1:12,0:12:6.02:70,6,0	1/1:4,1:5:3.01:50,3,0	1/1:20,0:20:45.14:541,45,0	1/1:10,0:10:14.71:181,15,0	0/0:26,0:26:69.22:0,69,1637	1/1:19,0:19:42.11:485,42,0	1/1:27,0:26:57.17:689,57,0	1/1:6,0:6:18.05:209,18,0
chr10	11176355	.	CTTTCT	C	13926.32	PASS	AB=0.889;AC=45;AF=0.804;AN=56;BaseQRankSum=7.702;DP=417;FS=6.912;HRun=0;HaplotypeScore=163.9584;InbreedingCoeff=0.5846;MQ=56.24;MQ0=4;MQRankSum=-6.798;QD=40.37;ReadPosRankSum=-1.020;VQSLOD=4.2587;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:24:14.05:576,0,14	1/1:3,5:8:17.98:266,18,0	0/0:16,0:9:12.03:0,12,260	0/0:15,0:9:16.23:0,16,238	0/0:17,0:17:50.38:0,50,1440	1/1:22,0:22:7.25:544,7,0	1/1:11,3:14:0.41:418,0,0	1/1:4,6:10:18.03:208,18,0	1/1:11,2:13:30.09:424,30,0	1/1:5,15:20:54.13:983,54,0	1/1:1,18:19:54.18:1109,54,0	1/1:7,3:10:21.06:333,21,0	1/1:7,1:8:15.04:214,15,0	0/1:4,0:4:9.73:102,0,10	1/1:2,18:20:54.17:1069,54,0	1/1:5,16:20:57.17:1034,57,0	1/1:3,14:16:30.09:565,30,0	0/1:4,4:8:5.40:229,0,5	1/1:2,15:16:42:572,42,0	1/1:0,15:15:42.13:811,42,0	1/1:1,7:8:12.03:185,12,0	1/1:1,0:1:3.01:39,3,0	1/1:2,17:19:51.16:1003,51,0	1/1:2,8:10:20.74:373,21,0	0/0:24,0:24:72.23:0,72,2076	1/1:4,14:18:51.14:938,51,0	1/1:12,20:32:90.25:1518,90,0	1/1:1,6:7:21.07:411,21,0
chr10	11176359	.	CT	C	3538.20	PASS	AB=1.000;AC=39;AF=0.696;AN=56;BaseQRankSum=9.131;DP=411;FS=7.413;HRun=8;HaplotypeScore=178.0230;InbreedingCoeff=0.7416;MQ=57.25;MQ0=4;MQRankSum=-9.177;QD=12.55;ReadPosRankSum=-1.782;VQSLOD=1.2033;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:11.23:0,11,26	1/1:5,2:7:14.53:98,15,0	0/0:18,0:10:4.29:0,4,117	0/0:16,0:10:11.42:0,11,137	0/0:19,0:19:51.14:0,51,603	0/0:22,0:22:21.93:0,22,93	0/1:15,0:15:19.27:32,0,19	1/1:6,0:6:10.73:91,11,0	1/1:13,0:13:4.09:20,4,0	1/1:15,3:18:46.83:266,47,0	1/1:18,1:19:51.07:257,51,0	1/1:10,0:10:7.57:35,8,0	1/1:6,0:6:2.34:11,2,0	0/0:4,0:4:4.40:0,4,24	1/1:18,2:20:51.84:306,52,0	1/1:16,5:20:54.67:333,55,0	1/1:14,3:16:28.89:178,29,0	1/1:5,3:8:14.60:108,15,0	1/1:15,0:14:27.63:176,28,0	1/1:15,0:15:39.21:211,39,0	1/1:7,1:8:11.69:85,12,0	0/0:1,0:1:0.47:0,0,1	1/1:17,2:19:48.26:265,48,0	1/1:8,2:10:19.77:123,20,0	0/0:26,0:26:69.21:0,69,833	1/1:14,3:17:45.86:263,46,0	1/1:20,11:30:86.61:567,87,0	1/1:6,1:7:20.05:111,20,0
chr10	11176379	.	TTATATA	T	3985.62	PASS	AB=0.667;AC=31;AF=0.554;AN=56;BaseQRankSum=9.409;DP=384;FS=15.515;HRun=0;HaplotypeScore=197.0160;InbreedingCoeff=0.7031;MQ=52.38;MQ0=6;MQRankSum=-9.774;QD=18.89;ReadPosRankSum=4.302;VQSLOD=1.9277;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:20:48.15:0,48,1122	1/1:2,4:6:3.01:35,3,0	0/0:19,0:9:17.76:0,18,308	0/0:19,0:7:4.29:0,4,142	0/0:24,0:24:51.15:0,51,1246	0/0:21,0:21:42.09:0,42,912	0/0:10,0:10:12.04:0,12,237	1/1:7,0:6:17.77:127,18,0	0/0:11,0:11:24.08:0,24,644	1/1:5,10:15:36.12:671,36,0	1/1:8,12:20:9.03:137,9,0	0/0:5,0:5:9.02:0,9,175	0/0:4,0:4:9.50:0,10,213	0/0:6,0:6:6.01:0,6,100	1/1:9,8:17:18.06:272,18,0	1/1:10,8:18:21.07:327,21,0	1/1:9,4:11:9.03:152,9,0	1/1:5,3:8:21.07:362,21,0	1/1:9,0:8:1.77:100,2,0	1/1:20,0:20:6.01:60,6,0	1/1:8,0:8:1.93:28,2,0	0/0:3,0:3:0.47:0,0,1	1/1:7,8:15:9.03:136,9,0	1/1:4,4:8:9.03:137,9,0	0/0:30,0:30:51.64:0,52,1278	0/1:8,8:16:29.83:565,0,30	1/1:16,10:26:48.16:777,48,0	1/1:3,1:5:6.02:100,6,0
chr10	11176382	.	TATATATACATACACACACACACACAC	T	11591.92	PASS	AB=0.844;AC=25;AF=0.446;AN=56;BaseQRankSum=8.517;DP=379;FS=22.196;HRun=0;HaplotypeScore=285.1480;InbreedingCoeff=0.6237;MQ=52.25;MQ0=7;MQRankSum=-10.220;QD=65.49;ReadPosRankSum=5.893;VQSLOD=2.7328;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:24:51.18:0,51,3277	1/1:6,0:6:3.01:51,3,0	0/0:18,0:9:23.97:0,24,516	0/0:18,0:6:12.04:0,12,264	0/0:24,0:24:54.15:0,54,2971	0/0:23,0:23:45.15:0,45,2269	0/0:11,0:11:18.06:0,18,1059	1/1:7,0:6:8.26:193,8,0	0/0:9,0:9:24.08:0,24,1638	1/1:12,2:14:36.12:1195,36,0	1/1:16,4:20:9.03:639,9,0	0/0:5,0:5:9.02:0,9,225	0/0:4,0:4:12.04:0,12,744	0/0:6,0:6:6.02:0,6,150	1/1:11,6:17:18.06:1279,18,0	1/1:12,5:18:21.07:1315,21,0	1/1:10,1:9:9.03:357,9,0	1/1:5,3:8:21.07:941,21,0	0/1:8,0:8:13.31:172,0,13	0/0:19,0:19:6.02:0,6,270	0/0:9,0:9:2.34:0,2,135	0/0:3,0:3:0.47:0,0,1	1/1:11,4:15:9.03:639,9,0	1/1:5,3:8:9.03:639,9,0	0/0:27,0:27:51.59:0,52,2684	0/1:12,4:16:99:1371,0,272	1/1:13,8:22:48.16:2522,48,0	0/1:4,1:5:99:278,0,273
chr10	11176384	.	TATATACATAC	T	5739.64	PASS	AB=1.000;AC=30;AF=0.536;AN=56;BaseQRankSum=8.954;DP=352;FS=13.579;HRun=0;HaplotypeScore=191.1538;InbreedingCoeff=0.6927;MQ=50.03;MQ0=7;MQRankSum=-10.008;QD=32.25;ReadPosRankSum=6.090;VQSLOD=2.8784;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:25:54.17:0,54,1610	1/1:4,0:4:3.01:47,3,0	0/0:16,0:7:18.04:0,18,303	0/0:18,0:6:11.23:0,11,191	0/0:25,0:25:51.16:0,51,1418	0/0:25,0:25:51.13:0,51,1256	0/0:11,0:11:18.06:0,18,443	1/1:7,0:6:18.06:368,18,0	0/0:9,0:9:24.08:0,24,797	1/1:12,0:12:36.12:718,36,0	1/1:17,0:17:9.03:213,9,0	0/0:4,0:4:6.02:0,6,150	0/0:4,0:4:12.04:0,12,317	0/0:7,0:7:6.01:0,6,100	1/1:14,0:14:18.06:425,18,0	1/1:14,0:15:21.07:464,21,0	1/1:8,0:6:9.03:180,9,0	1/1:7,0:7:21.07:435,21,0	1/1:9,0:8:20.56:361,21,0	1/1:15,3:18:6.02:202,6,0	1/1:9,1:9:2.77:100,3,0	0/0:3,0:3:0.47:0,0,1	1/1:13,0:13:9.03:213,9,0	1/1:7,0:7:9.03:212,9,0	0/0:26,0:26:51.53:0,52,1359	0/1:13,0:13:68.75:653,0,69	1/1:20,0:19:48.16:1032,48,0	0/1:4,0:4:83.21:117,0,83
chr10	11176392	.	T	TACAC	95.87	PASS	AB=0.883;AC=8;AF=0.174;AN=46;BaseQRankSum=-2.916;DP=375;FS=0.000;HRun=0;HaplotypeScore=190.4119;InbreedingCoeff=0.5047;MQ=48.07;MQ0=11;MQRankSum=1.037;QD=1.37;ReadPosRankSum=-1.561;VQSLOD=2.3216;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:18.04:0,18,219	./.	./.	./.	1/1:15,7:22:6.02:140,6,0	0/0:22,0:22:12:0,12,132	0/0:13,0:13:12:0,12,137	./.	0/0:10,0:10:11.51:0,12,126	0/0:13,0:13:6:0,6,53	0/0:18,0:18:8.93:0,9,73	0/1:6,0:6:0.07:0,0,0	1/1:7,0:7:2.65:37,3,0	1/1:12,0:12:2.99:23,3,0	0/0:14,0:14:18.02:0,18,167	0/0:15,0:15:18.02:0,18,167	0/0:9,0:7:6:0,6,52	0/0:9,0:8:9.01:0,9,84	0/0:14,0:11:1.86:0,2,25	0/0:17,0:17:8.30:0,8,53	0/0:11,0:10:2.46:0,2,7	./.	0/0:13,0:13:9.01:0,9,84	0/0:7,0:7:9.16:0,9,67	0/1:16,6:23:0:0,0,0	0/0:15,0:15:14.75:0,15,153	0/0:21,0:19:30.03:0,30,279	0/0:4,0:4:5.97:0,6,48
chr10	11180077	.	TA	T	2709.61	PASS	AB=0.921;AC=20;AF=0.357;AN=56;BaseQRankSum=6.687;DP=663;FS=7.831;HRun=13;HaplotypeScore=70.4564;InbreedingCoeff=0.6969;MQ=68.93;MQ0=1;MQRankSum=0.976;QD=8.91;ReadPosRankSum=2.139;VQSLOD=2.6212;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,34:48:65.07:604,65,0	0/0:12,0:13:35.84:0,36,321	0/1:10,1:9:7.51:8,0,52	0/1:23,0:18:9.45:9,0,127	0/0:26,1:27:50.84:0,51,447	1/1:8,16:24:32.70:241,33,0	1/1:3,24:28:64.65:465,65,0	1/1:12,22:35:55.05:435,55,0	1/1:2,18:20:41.62:297,42,0	0/0:32,1:33:38.11:0,38,507	0/0:22,0:22:44.22:0,44,460	0/0:17,0:17:44.95:0,45,400	0/1:19,3:22:12.14:12,0,359	0/0:17,0:19:40.13:0,40,362	0/0:28,0:28:53.96:0,54,593	0/0:15,0:17:44.87:0,45,403	0/0:25,1:27:29.80:0,30,403	0/0:17,0:19:34.85:0,35,318	1/1:6,13:19:32.49:230,32,0	1/1:6,16:22:37.77:275,38,0	1/1:8,20:28:44.72:328,45,0	0/0:18,3:21:10.25:0,10,353	0/0:23,0:23:54.08:0,54,520	0/1:21,3:24:11.65:12,0,375	0/0:25,0:25:38.18:0,38,460	0/0:25,0:25:54:0,54,507	0/0:21,3:23:7.14:0,7,364	0/0:18,1:19:20.13:0,20,346
chr10	11180903	.	GC	G	7023.43	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=9.025;DP=453;FS=15.292;HRun=1;HaplotypeScore=53.6495;InbreedingCoeff=0.9924;MQ=92.12;MQ0=0;MQRankSum=-1.401;QD=38.17;ReadPosRankSum=4.514;VQSLOD=3.5472;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:78.21:0,78,1194	1/1:0,7:7:21.07:289,21,0	0/0:18,0:18:54.18:0,54,849	0/0:20,0:20:36.17:0,36,733	0/0:15,0:15:45.14:0,45,693	0/0:13,0:13:39.12:0,39,588	0/0:14,0:14:42.13:0,42,642	0/0:22,0:22:63.18:0,63,922	0/0:18,0:18:54.16:0,54,817	1/1:0,20:20:60.20:839,60,0	1/1:0,15:15:39.13:539,39,0	0/0:18,0:18:54.16:0,54,815	0/0:15,0:15:45.14:0,45,683	0/0:10,0:10:30.10:0,30,479	1/1:0,12:12:36.12:503,36,0	1/1:0,17:17:48.16:671,48,0	1/1:0,26:26:60.20:838,60,0	1/1:0,16:16:48.16:671,48,0	0/0:25,0:25:66.23:0,66,1054	0/0:5,0:5:12.04:0,12,192	0/0:27,0:27:81.25:0,81,1260	0/0:13,0:13:33.04:0,33,475	1/1:0,11:11:26.64:377,27,0	1/1:0,20:20:57.19:797,57,0	0/0:10,0:10:27.09:0,27,429	1/1:0,21:21:60.20:835,60,0	1/1:0,12:12:32.80:456,33,0	1/1:0,7:7:15.05:210,15,0
chr10	11181598	.	GAGAA	G	4650.92	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=10.673;DP=630;FS=0.897;HRun=0;HaplotypeScore=116.7028;InbreedingCoeff=0.9909;MQ=79.77;MQ0=0;MQRankSum=-3.267;QD=41.90;ReadPosRankSum=2.472;VQSLOD=5.4325;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,39:37:90.31:1702,90,0	0/0:13,0:13:33.11:0,33,865	0/0:26,0:25:56:0,56,1482	0/0:30,0:29:63.49:0,63,1433	0/0:13,0:13:39.13:0,39,1051	1/1:0,19:19:42.14:792,42,0	1/1:1,28:29:60.21:1136,60,0	0/0:44,0:44:99:0,120,3240	1/1:1,22:24:54.18:1022,54,0	0/0:11,0:11:30.10:0,30,759	0/0:14,0:14:32.69:0,33,643	0/0:32,0:32:96.33:0,96,2587	0/0:19,0:19:54.17:0,54,1362	0/0:32,0:32:93.30:0,93,2395	0/0:18,0:18:54.17:0,54,1402	0/0:20,0:20:57.20:0,57,1539	0/0:31,0:31:87.27:0,87,2276	0/0:28,0:28:84.29:0,84,2268	0/0:16,0:16:48.16:0,48,1295	0/0:14,0:14:39.13:0,39,1029	0/0:30,0:30:87.30:0,87,2281	0/0:19,0:19:51.17:0,51,1328	0/0:18,0:18:54.10:0,54,1316	0/0:28,0:28:84.29:0,84,2229	0/0:25,0:25:72.16:0,72,1821	0/0:25,0:25:72.22:0,72,1832	0/0:9,0:9:27.09:0,27,728	0/0:4,0:4:12.04:0,12,324
chr10	11181999	.	G	GA	1951.39	PASS	AB=0.710;AC=26;AF=0.464;AN=56;BaseQRankSum=-2.211;DP=455;FS=1.137;HRun=14;HaplotypeScore=59.7614;InbreedingCoeff=0.3639;MQ=53.49;MQ0=9;MQRankSum=-0.229;QD=7.25;ReadPosRankSum=-2.274;VQSLOD=1.9214;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,1:44:24.43:0,24,282	1/1:2,8:9:21:185,21,0	0/0:3,2:1:2.96:0,3,19	0/0:7,0:2:2.82:0,3,14	0/0:14,0:14:23.60:0,24,152	0/0:13,0:14:23.57:0,24,154	0/0:17,0:14:20.55:0,21,134	0/1:15,6:19:9.42:144,0,9	0/0:16,0:17:14.89:0,15,85	0/1:8,7:15:1.27:114,0,1	1/1:5,5:9:5.80:33,6,0	0/1:18,0:19:0.59:1,0,98	0/0:15,0:16:19.57:0,20,116	0/0:12,0:11:14.73:0,15,96	0/1:7,10:17:5.56:197,0,6	1/1:4,14:18:35.92:302,36,0	0/1:6,15:24:27.70:143,0,28	0/1:7,9:16:44.24:139,0,44	0/1:11,10:21:8.32:173,0,8	1/1:5,8:11:20.99:184,21,0	1/1:7,2:8:3:26,3,0	0/0:16,0:17:22.49:0,22,140	1/1:8,5:12:11.95:98,12,0	1/1:6,8:13:4.17:126,4,0	0/0:16,0:20:3.64:0,4,110	0/1:12,10:21:5.62:186,0,6	1/1:9,8:18:4.36:29,4,0	1/1:0,2:2:6:53,6,0
chr10	11182192	.	C	CTTT	2763.90	PASS	AB=1.000;AC=35;AF=0.625;AN=56;BaseQRankSum=2.899;DP=359;FS=4.454;HRun=14;HaplotypeScore=66.5991;InbreedingCoeff=0.8063;MQ=62.50;MQ0=2;MQRankSum=-2.936;QD=12.80;ReadPosRankSum=-1.174;VQSLOD=1.1428;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:26:16.20:0,16,182	1/1:4,1:6:11.82:128,12,0	0/1:9,0:7:0:0,0,0	0/1:4,0:4:0:0,0,0	0/0:20,0:21:20.50:0,20,234	0/0:14,0:16:23.61:0,24,220	0/1:4,0:4:0:0,0,0	0/0:23,0:21:29.58:0,30,296	0/0:6,0:6:11.86:0,12,123	1/1:13,4:17:14.94:182,15,0	1/1:12,4:18:23.15:282,23,0	1/1:6,0:17:13.39:54,13,0	1/1:3,0:12:10.38:32,10,0	1/1:3,0:5:0.89:2,1,0	1/1:4,4:9:15.03:232,15,0	1/1:3,3:8:13.27:182,13,0	1/1:10,11:24:38.57:543,39,0	1/1:3,10:12:12.04:210,12,0	0/0:12,0:14:26.80:0,27,250	0/0:12,0:12:11.62:0,12,122	0/0:9,0:9:9.62:0,10,94	1/1:2,0:4:2.49:5,2,0	1/1:5,4:11:15.05:219,15,0	1/1:0,3:4:4.26:55,4,0	0/0:15,0:16:23.52:0,24,233	1/1:11,4:16:16.58:200,17,0	1/1:10,5:17:21.07:310,21,0	1/1:4,8:13:21.05:320,21,0
chr10	11183304	.	G	GT	1340.08	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-8.150;DP=574;FS=0.566;HRun=8;HaplotypeScore=52.2424;InbreedingCoeff=0.9697;MQ=76.20;MQ0=0;MQRankSum=-0.855;QD=25.77;ReadPosRankSum=-1.179;VQSLOD=3.8342;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,2:39:73.43:0,73,922	0/0:5,0:5:11.99:0,12,105	0/0:21,0:21:44.58:0,45,410	0/0:8,0:8:12.76:0,13,100	1/1:4,21:25:62.86:665,63,0	0/0:20,0:20:48.02:0,48,439	0/0:13,0:13:35.98:0,36,316	0/0:34,0:34:74.99:0,75,676	0/0:18,0:18:45.01:0,45,408	0/0:27,0:27:69:0,69,622	0/0:21,0:21:63.02:0,63,571	0/0:13,0:13:36.02:0,36,329	0/0:14,0:14:42.01:0,42,381	0/0:13,0:13:30.89:0,31,294	0/0:19,0:19:57.03:0,57,522	0/0:22,0:22:63.02:0,63,573	0/0:22,0:22:63.03:0,63,577	0/0:14,0:14:39.02:0,39,357	0/0:22,0:22:60.01:0,60,542	0/0:40,0:40:99:0,105,942	0/0:16,0:16:41.23:0,41,364	0/0:17,0:17:42.02:0,42,384	0/0:22,0:22:57.03:0,57,522	0/0:19,0:19:57.03:0,57,522	1/1:3,24:27:69.21:796,69,0	0/0:23,0:23:65.90:0,66,581	0/0:28,0:28:69.01:0,69,626	0/0:11,0:11:23.97:0,24,213
chr10	11183932	.	ACC	A	7623.31	PASS	AB=0.976;AC=13;AF=0.232;AN=56;BaseQRankSum=-6.980;DP=1213;FS=1.528;HRun=3;HaplotypeScore=205.2022;InbreedingCoeff=0.4662;MQ=65.76;MQ0=16;MQRankSum=-0.919;QD=17.94;ReadPosRankSum=-5.644;VQSLOD=0.1117;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:58.47:0,58,912	0/0:8,0:7:15:0,15,132	0/0:57,0:23:27.68:0,28,649	0/0:82,0:41:84.47:0,84,1003	0/0:26,0:26:78.22:0,78,1360	0/1:21,2:23:77.79:78,0,370	0/1:50,0:50:35.66:36,0,820	1/1:1,38:39:99:1413,111,0	0/0:51,0:51:1.85:0,2,880	0/0:46,1:45:64.69:0,65,839	0/0:29,0:28:52.91:0,53,593	0/0:56,0:56:99:0,165,2945	0/0:48,0:48:99:0,141,2485	0/0:51,0:51:99:0,150,2687	0/1:46,0:46:20.53:21,0,796	0/0:37,0:37:62.85:0,63,813	0/0:42,1:42:15.37:0,15,768	0/1:24,1:25:65.70:66,0,372	1/1:2,26:27:78.14:1044,78,0	1/1:0,26:26:63.21:963,63,0	1/1:4,135:137:99:4001,266,0	0/0:40,0:40:99:0,114,2085	0/0:25,0:25:3.13:0,3,486	0/0:66,0:66:64.63:0,65,1314	0/0:32,0:32:93.30:0,93,1711	0/1:49,0:47:2.73:3,0,797	0/0:33,0:33:18.27:0,18,688	0/0:6,0:6:17.95:0,18,150
chr10	11185940	.	T	TA	5701.09	PASS	AB=1.000;AC=25;AF=0.446;AN=56;BaseQRankSum=-0.698;DP=433;FS=0.000;HRun=2;HaplotypeScore=44.1064;InbreedingCoeff=0.8983;MQ=65.83;MQ0=6;MQRankSum=0.191;QD=28.51;ReadPosRankSum=3.130;VQSLOD=4.4310;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:87.18:0,87,1026	1/1:2,9:11:18.06:248,18,0	0/0:19,0:10:15.46:0,15,151	0/1:17,0:9:8.70:9,0,115	0/0:19,0:19:57.11:0,57,642	0/0:18,0:18:54.15:0,54,645	0/0:12,0:12:27.08:0,27,332	0/0:32,0:32:87.21:0,87,1021	0/0:9,0:9:27.06:0,27,310	1/1:1,16:17:48.08:610,48,0	1/1:1,19:20:48.16:663,48,0	0/0:12,0:12:33.09:0,33,394	0/0:5,0:5:15.04:0,15,173	0/0:9,0:9:21.03:0,21,224	1/1:0,7:7:15.05:208,15,0	1/1:0,10:10:21.07:290,21,0	1/1:3,28:31:72.21:973,72,0	1/1:3,16:18:30.10:414,30,0	0/0:27,0:27:78.17:0,78,910	0/0:11,0:11:33.09:0,33,387	0/0:2,0:2:6.02:0,6,74	0/0:6,0:6:15.04:0,15,175	1/1:0,7:7:12.04:166,12,0	1/1:0,4:4:9.03:124,9,0	0/0:20,0:20:57.17:0,57,691	1/1:1,16:17:48.11:638,48,0	1/1:2,20:22:48.16:652,48,0	1/1:0,17:17:51.17:705,51,0
chr10	11186365	.	GAA	G	3670.93	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=4.180;DP=461;FS=0.400;HRun=3;HaplotypeScore=91.0950;InbreedingCoeff=0.9599;MQ=76.61;MQ0=10;MQRankSum=-1.521;QD=19.42;ReadPosRankSum=3.390;VQSLOD=1.4012;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:53.73:0,54,421	1/1:3,0:3:5.96:45,6,0	0/0:32,0:19:29.27:0,29,309	0/0:37,0:22:12.59:0,13,333	1/1:8,0:8:17.98:149,18,0	0/0:13,0:13:27.10:0,27,255	0/0:21,0:21:34:0,34,408	0/0:21,0:21:29.12:0,29,493	0/0:12,0:12:25.34:0,25,200	1/1:15,0:15:39.88:355,40,0	1/1:10,0:10:26.93:220,27,0	0/0:17,0:17:27.29:0,27,347	0/0:16,0:16:42.02:0,42,389	0/0:24,0:24:27.97:0,28,389	1/1:15,1:16:41.71:340,42,0	1/1:13,1:14:35.74:294,36,0	1/1:22,2:23:50.58:414,51,0	1/1:17,3:19:53.84:441,54,0	0/0:13,0:13:30.05:0,30,338	0/0:10,0:9:15.02:0,15,162	0/0:17,0:15:21.38:0,21,251	0/0:16,0:16:39.29:0,39,332	1/1:12,0:11:26.93:218,27,0	1/1:13,1:14:28.14:217,28,0	1/1:11,0:10:5.53:49,6,0	1/1:20,0:20:39.50:446,39,0	1/1:13,2:14:44.66:348,45,0	1/1:7,0:7:17.89:135,18,0
chr10	11186367	.	A	AAG	227.53	PASS	AB=1.000;AC=24;AF=0.600;AN=40;BaseQRankSum=-3.575;DP=480;FS=22.892;HRun=0;HaplotypeScore=114.7082;InbreedingCoeff=0.3493;MQ=71.56;MQ0=12;MQRankSum=1.599;QD=1.04;ReadPosRankSum=0.753;VQSLOD=0.5701;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:32,0:19:1.25:0,1,3	./.	./.	1/1:15,0:15:3:26,3,0	0/0:22,0:22:2.11:0,2,7	1/1:25,0:25:10.28:49,10,0	1/1:11,0:11:0.47:1,0,0	1/1:18,0:18:0.47:1,0,0	./.	1/1:18,0:18:6:64,6,0	1/1:15,1:16:3.01:37,3,0	1/1:18,5:23:2.05:36,2,0	0/0:16,0:16:2.84:0,3,14	0/0:14,0:14:5.34:0,5,23	0/0:25,0:23:2.43:0,2,13	0/1:21,0:20:7.40:8,0,7	1/1:15,0:15:6.89:55,7,0	1/1:11,0:10:2.99:25,3,0	1/1:18,0:16:2.90:17,3,0	1/1:15,0:15:3:25,3,0	./.	0/0:14,0:14:2.68:0,3,11	0/1:12,0:11:0:0,0,0	./.	0/0:15,0:14:5.68:0,6,27	./.
chr10	11186408	.	AGAGAGAGCGC	A	4356.44	PASS	AB=1.000;AC=34;AF=0.607;AN=56;BaseQRankSum=0.203;DP=503;FS=76.859;HRun=0;HaplotypeScore=152.5295;InbreedingCoeff=0.1434;MQ=61.36;MQ0=16;MQRankSum=0.184;QD=11.20;ReadPosRankSum=2.273;VQSLOD=1.1211;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:25:20.18:58,20,0	1/1:2,0:2:6.02:99,6,0	0/0:19,0:9:24.86:0,25,340	0/0:38,0:23:46.22:0,46,842	1/1:24,0:24:2.94:36,3,0	0/1:20,0:19:9.86:10,0,57	0/1:30,0:29:17.03:17,0,254	0/1:21,0:20:41.25:41,0,121	0/0:13,0:13:0.82:0,1,221	1/1:13,0:13:31.50:362,31,0	0/0:8,0:8:0:0,0,0	0/0:27,0:27:13.59:0,14,363	0/1:13,0:12:21.02:21,0,72	0/1:27,0:27:2.87:3,0,238	1/1:7,1:8:18.04:274,18,0	1/1:7,0:7:15.04:304,15,0	1/1:18,0:17:41.59:681,42,0	1/1:16,0:15:13.65:550,14,0	0/1:13,0:13:2.77:3,0,292	0/1:12,0:11:16.29:16,0,77	0/1:33,0:32:21.36:21,0,57	0/1:28,0:27:37:37,0,56	0/0:9,0:8:0:0,0,1	1/1:15,1:16:27.89:398,28,0	0/1:20,0:19:99:299,0,124	1/1:21,0:19:41.80:647,42,0	1/1:7,2:9:27.04:442,27,0	1/1:12,0:11:3.01:38,3,0
chr10	11186414	.	AGCGC	A	5374.37	PASS	AB=0.885;AC=44;AF=0.786;AN=56;BaseQRankSum=-2.065;DP=524;FS=16.884;HRun=0;HaplotypeScore=118.5065;InbreedingCoeff=0.3297;MQ=66.36;MQ0=15;MQRankSum=-3.153;QD=11.66;ReadPosRankSum=1.879;VQSLOD=3.0386;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:24:21.01:60,21,0	1/1:2,0:2:6.02:99,6,0	0/0:20,0:10:27.46:0,27,384	0/0:43,0:28:54.05:0,54,944	1/1:1,23:24:3.01:36,3,0	1/1:22,0:21:12.01:32,12,0	0/1:30,0:29:23.96:24,0,24	1/1:20,0:19:17.01:77,17,0	0/1:14,0:14:6.82:7,0,37	1/1:1,13:14:36.10:576,36,0	0/1:1,7:8:0:0,0,0	0/1:25,0:25:3.53:4,0,67	1/1:13,0:12:8.70:34,9,0	0/1:30,0:30:12.91:13,0,40	1/1:8,0:8:21.07:352,21,0	1/1:10,0:10:24.08:403,24,0	1/1:18,0:18:45.14:665,45,0	1/1:16,0:15:39.13:630,39,0	0/1:11,0:11:9.72:19,0,10	0/1:14,0:13:0.57:25,0,1	1/1:34,0:33:16.01:49,16,0	1/1:30,0:29:33.10:93,33,0	0/1:2,9:10:0:1,0,0	1/1:14,0:14:26.86:413,27,0	1/1:19,0:18:29.76:459,30,0	1/1:5,18:21:51.11:826,51,0	1/1:10,0:10:30.06:437,30,0	1/1:1,0:15:3.01:38,3,0
chr10	11186704	.	GGT	G	1174.54	PASS	AB=0.856;AC=15;AF=0.300;AN=50;BaseQRankSum=-2.443;DP=556;FS=2.388;HRun=0;HaplotypeScore=92.5454;InbreedingCoeff=0.5201;MQ=56.68;MQ0=13;MQRankSum=1.891;QD=5.81;ReadPosRankSum=4.472;VQSLOD=2.3118;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:17,7:24:9.02:98,9,0	./.	./.	0/0:40,0:28:0.47:0,0,1	0/0:12,0:12:2.86:0,3,23	1/1:13,1:19:14.37:88,14,0	0/1:31,2:32:26.68:117,0,27	0/0:16,0:16:3.90:0,4,46	1/1:11,5:17:11.87:112,12,0	0/0:14,0:13:20.91:0,21,181	0/0:11,0:11:9.02:0,9,106	1/1:12,10:23:35.93:372,36,0	1/1:6,2:9:11.85:103,12,0	1/1:12,4:16:12.03:130,12,0	0/0:16,0:18:26.99:0,27,258	0/0:20,0:21:24:0,24,211	0/0:16,0:16:15.02:0,15,151	0/0:22,0:22:31.49:0,31,270	0/0:14,0:14:6.01:0,6,71	./.	0/1:32,6:37:90.97:91,0,303	0/1:16,6:22:17.46:233,0,17	0/0:14,0:16:11.80:0,12,114	0/0:30,0:30:26.27:0,26,264	0/0:19,0:19:8.87:0,9,111	0/0:18,0:20:32.91:0,33,301	0/0:10,0:11:3.47:0,3,28	0/0:12,0:13:3:0,3,26
chr10	11186790	.	CAAACAAAACAAAACA	C	12793.68	PASS	AB=0.607;AC=33;AF=0.589;AN=56;BaseQRankSum=12.709;DP=517;FS=10.422;HRun=0;HaplotypeScore=225.8200;InbreedingCoeff=0.8419;MQ=75.94;MQ0=3;MQRankSum=-12.308;QD=54.44;ReadPosRankSum=4.359;VQSLOD=2.7741;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:75.26:0,75,4647	1/1:1,2:3:6.02:226,6,0	0/0:31,0:23:33.11:0,33,1607	0/0:42,0:36:39.46:0,39,1719	0/0:8,0:20:7.32:0,7,406	0/0:27,0:27:66.23:0,66,4553	0/0:21,0:21:42.14:0,42,2648	0/0:25,0:25:48.16:0,48,3031	0/0:22,0:22:42.14:0,42,3009	1/1:6,8:14:24.08:1009,24,0	1/1:2,8:10:15.05:631,15,0	1/1:11,10:21:33.11:1374,33,0	1/1:2,6:8:15.05:631,15,0	1/1:6,4:10:9.03:378,9,0	1/1:5,8:13:24.08:1005,24,0	1/1:10,15:25:36.12:1513,36,0	1/1:7,11:18:16.54:754,17,0	1/1:6,5:11:9.03:376,9,0	0/0:19,0:18:30.06:0,30,1480	0/0:20,0:20:54.19:0,54,3790	0/0:25,0:25:51.18:0,51,3052	1/1:12,8:20:24.08:1009,24,0	1/1:4,5:9:12.04:505,12,0	1/1:8,4:12:3.01:126,3,0	0/1:6,0:17:18.88:19,0,28	1/1:12,13:25:39.13:1598,39,0	1/1:5,11:16:30.10:1262,30,0	1/1:0,3:3:9.03:378,9,0
chr10	11188007	.	TC	T	7979.09	PASS	AB=0.529;AC=27;AF=0.500;AN=54;BaseQRankSum=13.366;DP=597;FS=12.711;HRun=2;HaplotypeScore=70.0091;InbreedingCoeff=0.9148;MQ=54.23;MQ0=15;MQRankSum=3.919;QD=28.00;ReadPosRankSum=4.003;VQSLOD=3.2807;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:57:99:0,156,2281	1/1:1,9:10:24.08:312,24,0	./.	0/0:8,0:8:20.96:0,21,217	1/1:3,25:26:60.19:769,60,0	0/0:23,0:23:66.22:0,66,986	0/0:28,0:28:81.27:0,81,1170	0/0:27,0:27:72.69:0,73,1004	0/0:22,1:22:21.36:0,21,780	1/1:4,20:22:57.18:731,57,0	1/1:0,17:17:45.12:551,45,0	0/0:20,0:20:57.17:0,57,806	0/0:13,0:12:27.09:0,27,404	0/0:17,0:17:51.10:0,51,717	1/1:2,11:12:21.07:273,21,0	1/1:2,25:25:63.20:817,63,0	1/1:3,29:31:57.19:740,57,0	0/1:2,16:17:5.65:428,0,6	0/0:23,0:21:63.11:0,63,846	0/0:31,0:30:75.23:0,75,1065	0/0:21,0:20:57.16:0,57,809	0/0:21,0:21:54.18:0,54,791	1/1:0,14:14:33.11:424,33,0	1/1:5,24:27:60.20:779,60,0	1/1:2,21:21:48.16:619,48,0	1/1:2,30:30:87.26:1108,87,0	1/1:3,14:15:30.10:389,30,0	1/1:0,1:1:3.01:39,3,0
chr10	11188164	.	TAC	T	9388.62	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=14.187;DP=615;FS=6.866;HRun=0;HaplotypeScore=74.7427;InbreedingCoeff=0.9966;MQ=68.58;MQ0=4;MQRankSum=-3.375;QD=35.16;ReadPosRankSum=5.676;VQSLOD=7.0657;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,126,2248	1/1:0,6:6:15.05:221,15,0	0/0:23,0:23:66.68:0,67,1188	0/0:23,0:20:54.15:0,54,940	1/1:0,18:18:45.15:663,45,0	0/0:19,0:19:51.17:0,51,954	0/0:25,0:25:75.24:0,75,1359	0/0:38,0:38:99:0,111,2025	0/0:23,1:24:22.11:0,22,1128	1/1:1,23:24:69.21:991,69,0	1/1:1,15:16:42.14:619,42,0	0/0:25,0:25:72.23:0,72,1303	0/0:11,0:11:33.10:0,33,587	0/0:14,0:14:36.12:0,36,674	1/1:2,12:14:27.09:397,27,0	1/1:1,17:18:45.15:662,45,0	1/1:0,29:29:60.20:883,60,0	1/1:0,20:20:51.17:751,51,0	0/0:27,0:27:72.25:0,72,1323	0/0:21,0:21:63.22:0,63,1173	0/0:28,0:28:84.27:0,84,1529	0/0:17,0:17:51.16:0,51,916	1/1:1,19:19:45.15:663,45,0	1/1:0,22:21:45.15:662,45,0	1/1:0,19:18:45.15:663,45,0	1/1:2,29:31:84.07:1198,84,0	1/1:0,23:23:48.16:706,48,0	1/1:0,7:7:21.07:309,21,0
chr10	11188362	.	CT	C	2863.38	PASS	AB=0.783;AC=36;AF=0.643;AN=56;BaseQRankSum=8.966;DP=582;FS=1.895;HRun=15;HaplotypeScore=85.9357;InbreedingCoeff=0.4412;MQ=66.31;MQ0=1;MQRankSum=-0.480;QD=7.02;ReadPosRankSum=6.099;VQSLOD=2.9649;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:43,3:47:70.41:0,70,817	1/1:1,10:11:14.72:96,15,0	0/1:16,0:6:13.15:13,0,20	0/1:20,0:17:5.75:6,0,59	1/1:6,0:16:12.18:35,12,0	0/1:7,1:8:1.91:2,0,91	0/0:33,0:33:53.74:0,54,563	0/0:21,5:26:6.28:0,6,286	0/0:18,1:19:14.44:0,14,221	1/1:9,11:23:34.93:200,35,0	1/1:4,12:16:6.81:142,7,0	1/1:6,19:26:11.11:191,11,0	0/1:5,6:11:8.61:78,0,9	0/1:5,13:19:0.15:115,0,0	1/1:3,17:20:37.35:235,37,0	0/1:8,12:21:27.20:212,0,27	1/1:9,19:32:55.28:330,55,0	1/1:4,18:24:54.27:338,54,0	0/0:20,0:21:24.06:0,24,226	0/1:11,1:13:2.61:3,0,99	0/0:24,1:28:6.59:0,7,246	1/1:3,11:18:29.66:171,30,0	1/1:4,9:14:16.77:102,17,0	1/1:5,20:26:5.27:152,5,0	1/1:5,0:18:24.87:70,25,0	1/1:8,16:25:46.12:290,46,0	1/1:6,12:18:28.78:191,29,0	0/1:6,6:12:8.59:78,0,9
chr10	11189338	.	T	TTGGCCA	26021.59	PASS	AB=0.553;AC=27;AF=0.482;AN=56;BaseQRankSum=18.647;DP=738;FS=8.718;HRun=0;HaplotypeScore=184.1938;InbreedingCoeff=0.9357;MQ=75.97;MQ0=1;MQRankSum=-19.970;QD=79.09;ReadPosRankSum=-0.082;VQSLOD=5.4531;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,159,3672	1/1:0,8:9:24.08:856,24,0	0/0:28,0:28:65.55:0,66,1378	0/0:36,0:35:84.25:0,84,1738	1/1:8,22:31:56.93:1765,57,0	0/0:24,0:24:66.19:0,66,1490	0/0:24,0:24:63.22:0,63,1514	0/0:29,0:29:87.27:0,87,1843	0/0:31,0:31:93.26:0,93,2035	1/1:6,24:34:99:3152,99,0	1/1:2,19:24:57.20:1996,57,0	0/0:17,0:17:51.16:0,51,1158	0/0:19,0:19:57.18:0,57,1301	0/0:19,0:19:54.12:0,54,1133	1/1:4,26:31:75.24:2559,75,0	1/1:7,21:28:81.25:2611,81,0	1/1:18,12:30:71.87:1870,72,0	1/1:5,11:16:42.03:1250,42,0	0/0:22,0:22:66.22:0,66,1489	0/0:29,0:29:86.86:0,87,1873	0/0:48,0:47:99:0,132,2934	0/0:28,0:28:81.23:0,81,1760	0/1:5,20:26:8.91:1958,0,9	1/1:8,6:13:23.34:590,23,0	1/1:6,12:19:51.08:1507,51,0	1/1:6,22:31:87.24:2774,87,0	1/1:9,18:27:81.19:2382,81,0	1/1:2,6:8:24.06:750,24,0
chr10	11189400	.	T	TTC	11416.93	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=1.474;DP=693;FS=0.313;HRun=0;HaplotypeScore=124.5470;InbreedingCoeff=0.9655;MQ=77.21;MQ0=3;MQRankSum=-5.506;QD=37.43;ReadPosRankSum=5.329;VQSLOD=6.7327;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:56:99:0,159,2057	1/1:3,4:7:15.05:253,15,0	0/0:31,0:26:45.15:0,45,531	0/0:52,0:42:69.75:0,70,962	1/1:7,21:28:60.21:1027,60,0	0/0:24,0:24:60.20:0,60,788	0/0:21,0:21:54.16:0,54,696	0/0:34,0:34:78.20:0,78,956	0/0:21,0:21:51.15:0,51,644	1/1:6,25:31:75.26:1285,75,0	1/1:9,10:19:39.13:660,39,0	0/0:16,0:16:45.14:0,45,579	0/0:16,0:16:45.15:0,45,591	0/0:23,0:23:63.19:0,63,814	1/1:12,17:28:66.20:1047,66,0	1/1:1,22:23:63.22:1077,63,0	1/1:6,29:35:75.26:1284,75,0	1/1:1,15:16:30.10:514,30,0	0/0:21,0:21:51.17:0,51,667	0/0:19,0:19:45.13:0,45,576	0/0:36,0:35:96.30:0,96,1246	0/0:18,0:18:48.16:0,48,631	1/1:9,11:20:1.15:579,1,0	1/1:2,14:16:27.09:462,27,0	1/1:3,17:20:45.15:771,45,0	1/1:6,17:23:54.18:923,54,0	1/1:4,27:31:72.25:1225,72,0	1/1:0,6:6:18.06:308,18,0
chr10	11190084	.	CT	C	4894.87	PASS	AB=0.600;AC=27;AF=0.482;AN=56;BaseQRankSum=15.685;DP=477;FS=0.373;HRun=9;HaplotypeScore=90.5998;InbreedingCoeff=0.9113;MQ=62.24;MQ0=7;MQRankSum=-1.641;QD=21.10;ReadPosRankSum=3.030;VQSLOD=5.2890;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,1:33:56.78:0,57,906	1/1:1,5:6:17.05:143,17,0	0/0:12,0:11:22.60:0,23,234	0/0:8,0:7:11.19:0,11,145	1/1:5,20:25:50.97:465,51,0	0/0:24,0:24:69.19:0,69,780	0/0:16,0:15:36.11:0,36,414	0/0:36,0:31:78.22:0,78,890	0/0:18,0:18:45.12:0,45,511	1/1:7,16:23:45.02:410,45,0	1/1:1,15:16:45.02:409,45,0	0/0:16,0:16:45.13:0,45,516	0/0:17,0:17:51.15:0,51,588	0/0:9,0:9:12.02:0,12,128	1/1:4,12:16:37.26:331,37,0	1/1:2,12:14:33.02:301,33,0	1/1:3,17:20:51.02:464,51,0	1/1:3,15:18:45.02:410,45,0	0/0:24,0:24:63.14:0,63,697	0/0:19,0:19:54.11:0,54,586	0/0:9,0:8:15.04:0,15,173	0/0:4,0:4:12.04:0,12,138	1/1:4,9:13:27.01:246,27,0	0/1:1,2:3:21.31:21,0,28	1/1:7,22:29:63.02:570,63,0	1/1:5,21:26:62.06:551,62,0	1/1:1,12:12:36.02:328,36,0	1/1:1,9:10:27.01:245,27,0
chr10	11191153	.	A	AT	867.41	PASS	AB=1.000;AC=10;AF=0.179;AN=56;BaseQRankSum=3.543;DP=294;FS=6.271;HRun=2;HaplotypeScore=45.0808;InbreedingCoeff=0.6575;MQ=53.03;MQ0=14;MQRankSum=0.826;QD=15.22;ReadPosRankSum=-2.345;VQSLOD=2.2935;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:21:43.33:0,43,211	0/0:5,0:5:12.04:0,12,148	0/1:6,0:3:25.10:25,0,31	0/0:4,0:4:12.04:0,12,142	0/0:14,0:14:36.11:0,36,446	0/0:15,0:15:11:0,11,85	0/0:4,0:3:4.53:0,5,17	1/1:8,13:19:42.45:475,42,0	0/0:4,0:4:9.05:0,9,37	0/0:8,0:8:24.07:0,24,286	0/0:13,0:13:21.06:0,21,248	0/0:4,0:3:8.56:0,9,43	0/1:1,0:1:0:0,0,0	0/0:3,0:2:5.72:0,6,29	0/0:8,0:8:12.04:0,12,149	0/0:7,0:7:15.05:0,15,186	0/0:39,0:32:72.18:0,72,875	0/0:23,0:20:35.94:0,36,423	1/1:10,4:12:20.59:230,21,0	1/1:3,7:8:15.05:183,15,0	1/1:0,5:5:9.03:109,9,0	0/0:2,0:2:2.83:0,3,14	0/0:8,0:8:18.06:0,18,223	0/0:5,0:4:9.03:0,9,112	0/0:14,0:13:39.12:0,39,482	0/0:14,0:14:36.10:0,36,432	0/0:8,0:6:5.60:0,6,74	0/0:13,0:12:36.11:0,36,446
chr10	11191269	.	CTG	C	1845.44	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=2.732;DP=348;FS=1.338;HRun=0;HaplotypeScore=62.7719;InbreedingCoeff=0.8927;MQ=56.71;MQ0=5;MQRankSum=0.749;QD=12.47;ReadPosRankSum=0.849;VQSLOD=3.4451;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:57.03:0,57,742	1/1:4,1:5:3.01:35,3,0	0/0:19,0:9:23.84:0,24,255	0/0:21,1:19:26.20:0,26,273	1/1:4,11:15:11.73:125,12,0	0/0:24,0:24:41.86:0,42,581	0/0:11,0:11:21.06:0,21,285	0/0:16,0:14:30.07:0,30,409	0/0:9,0:9:17.93:0,18,217	1/1:5,1:6:11.91:105,12,0	1/1:4,3:7:9.03:104,9,0	0/0:5,0:5:15.05:0,15,243	0/0:6,0:6:15.05:0,15,231	0/0:6,0:6:12.04:0,12,190	1/1:3,3:6:9.02:103,9,0	1/1:4,1:5:5.95:49,6,0	1/1:14,8:20:32.97:339,33,0	1/1:10,4:14:18.02:184,18,0	0/0:9,0:9:20.93:0,21,220	0/0:17,0:16:39.03:0,39,548	0/0:14,0:14:33.94:0,34,480	0/0:6,0:6:11.93:0,12,137	1/1:9,1:10:20.96:176,21,0	1/1:4,4:7:6.02:67,6,0	1/1:6,6:12:9.03:110,9,0	1/1:16,0:16:32.87:287,33,0	1/1:8,8:14:29.75:282,30,0	1/1:4,2:6:11.82:100,12,0
chr10	11191284	.	TGTGA	T	2182.33	PASS	AB=0.929;AC=26;AF=0.464;AN=56;BaseQRankSum=3.178;DP=352;FS=5.173;HRun=0;HaplotypeScore=82.8523;InbreedingCoeff=0.7569;MQ=65.32;MQ0=8;MQRankSum=-0.232;QD=16.05;ReadPosRankSum=-0.648;VQSLOD=2.2495;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:57.15:0,57,884	1/1:1,0:1:3.01:42,3,0	0/0:29,0:15:12.81:0,13,385	0/0:27,0:20:25.53:0,26,527	0/1:15,1:16:7.14:63,0,7	0/0:20,0:20:42.60:0,43,677	0/0:15,0:15:1.85:0,2,330	0/0:19,0:18:51.14:0,51,918	0/0:8,0:8:13.02:0,13,280	1/1:6,0:6:14.20:141,14,0	1/1:6,0:6:10.58:129,11,0	0/0:7,0:7:18.05:0,18,438	0/0:7,0:7:20.98:0,21,431	0/0:6,0:6:12.04:0,12,317	1/1:4,0:4:8.89:94,9,0	1/1:1,2:3:6.02:77,6,0	1/1:21,1:19:36.71:446,37,0	1/1:17,0:17:16.23:220,16,0	0/0:13,0:12:36.04:0,36,477	0/0:16,0:15:39.10:0,39,922	0/0:16,0:15:42.04:0,42,866	0/0:5,0:5:15.02:0,15,255	1/1:10,0:10:23.06:190,23,0	1/1:8,0:6:6.02:80,6,0	0/1:10,1:11:7.72:36,0,8	1/1:4,10:14:15.70:357,16,0	1/1:13,1:12:32.97:402,33,0	1/1:3,1:4:11.83:114,12,0
chr10	11191293	.	GA	G	2258.99	PASS	AB=0.831;AC=30;AF=0.536;AN=56;BaseQRankSum=6.229;DP=338;FS=6.168;HRun=1;HaplotypeScore=67.0423;InbreedingCoeff=0.3174;MQ=62.15;MQ0=8;MQRankSum=-0.816;QD=10.51;ReadPosRankSum=3.136;VQSLOD=1.7088;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:18,4:21:33.33:136,0,33	1/1:0,1:1:3.01:40,3,0	0/0:31,1:14:10.71:0,11,147	0/1:32,0:18:13.51:14,0,245	0/1:11,2:13:7.71:8,0,13	0/1:13,6:19:60.84:154,0,61	0/1:7,6:13:17.02:183,0,17	0/0:22,0:21:57.08:0,57,686	0/1:4,5:9:38.50:113,0,39	1/1:1,3:4:7.57:86,8,0	1/1:0,6:6:12.04:158,12,0	0/0:9,0:9:20.96:0,21,268	0/0:7,0:7:21.03:0,21,258	0/0:8,0:8:14.98:0,15,160	1/1:2,3:5:5.03:73,5,0	1/1:1,1:2:4.56:40,5,0	1/1:9,12:18:44.96:489,45,0	1/1:3,13:16:28.55:321,29,0	0/0:12,0:11:30.04:0,30,372	0/0:16,0:15:36.10:0,36,471	0/0:13,0:12:33.45:0,33,412	0/0:4,0:4:9.03:0,9,128	1/1:1,3:4:5.61:81,6,0	1/1:2,5:5:6.02:76,6,0	0/1:11,0:11:16.61:31,0,17	0/1:9,2:11:29.27:71,0,29	1/1:3,10:11:19.84:267,20,0	1/1:1,5:6:9.03:110,9,0
chr10	11191294	.	A	AG	1650.86	PASS	AB=0.985;AC=32;AF=0.571;AN=56;BaseQRankSum=5.562;DP=345;FS=9.107;HRun=8;HaplotypeScore=73.0826;InbreedingCoeff=0.4998;MQ=61.29;MQ0=8;MQRankSum=-1.735;QD=7.47;ReadPosRankSum=1.786;VQSLOD=0.6416;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,13:21:13.07:387,13,0	1/1:1,0:1:2.92:17,3,0	0/0:32,0:13:12.43:0,12,75	0/1:33,0:18:27.13:27,0,122	0/0:12,0:12:12.04:0,12,67	1/1:10,9:19:6.44:298,6,0	1/1:12,4:15:29.65:233,30,0	0/0:21,0:20:38.99:0,39,352	1/1:9,1:10:10.22:71,10,0	1/1:5,0:5:8.91:70,9,0	1/1:6,0:6:11.61:64,12,0	0/1:9,1:10:13.61:14,0,143	0/0:7,0:7:15.01:0,15,137	0/0:8,0:8:11.97:0,12,99	0/1:5,0:5:4.52:21,0,5	1/1:2,0:2:2.80:13,3,0	1/1:19,2:18:37.99:243,38,0	1/1:17,0:16:20.28:142,20,0	0/0:12,0:11:10.16:0,10,218	0/0:17,0:16:32.51:0,33,282	0/0:12,0:11:24.47:0,24,220	0/0:3,0:3:9:0,9,82	1/1:4,0:4:5.48:33,5,0	1/1:10,0:8:5.78:31,6,0	0/1:11,0:11:25.24:25,0,43	0/1:11,0:11:0.83:1,0,43	0/1:12,0:10:1.21:87,0,1	1/1:6,0:6:8.77:65,9,0
chr10	11191315	.	AAGAG	A	307.25	PASS	AB=0.962;AC=16;AF=0.320;AN=50;BaseQRankSum=1.586;DP=351;FS=4.026;HRun=0;HaplotypeScore=92.9721;InbreedingCoeff=0.2688;MQ=58.88;MQ0=12;MQRankSum=-1.091;QD=2.29;ReadPosRankSum=0.411;VQSLOD=1.5906;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:3.27:0,3,14	0/0:2,0:2:1.25:0,1,3	./.	./.	0/0:13,0:13:8.88:0,9,92	0/1:16,0:17:35.47:43,0,35	1/1:12,0:14:10.57:88,11,0	0/0:22,0:21:4.25:0,4,38	1/1:7,0:8:3.37:17,3,0	0/0:11,0:10:16.87:0,17,234	0/0:7,0:7:3.01:0,3,70	0/1:10,0:10:25.14:76,0,25	0/0:4,0:5:5.73:0,6,34	0/1:9,1:10:27.01:38,0,27	0/1:8,0:8:0:0,0,0	0/0:7,0:7:6.02:0,6,81	0/0:15,0:16:18.03:0,18,310	0/0:19,0:19:16.86:0,17,338	1/1:12,1:13:8:77,8,0	1/1:13,0:13:2.97:27,3,0	1/1:10,6:15:2.98:46,3,0	./.	0/0:10,0:9:0.27:0,0,1	0/1:11,0:10:0:0,0,0	0/1:10,1:11:34.65:35,0,199	0/0:9,0:9:18.04:0,18,252	0/0:10,0:14:9.03:0,9,129	0/0:8,0:7:3.01:0,3,59
chr10	11191573	.	AC	A	11359.07	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=14.229;DP=682;FS=2.807;HRun=1;HaplotypeScore=73.2664;InbreedingCoeff=0.9991;MQ=90.84;MQ0=0;MQRankSum=-3.314;QD=38.51;ReadPosRankSum=4.240;VQSLOD=5.5318;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,150,2344	1/1:0,10:10:24.04:313,24,0	0/0:36,0:36:99:0,105,1606	0/0:29,0:29:78.16:0,78,1132	1/1:0,27:27:75.25:1037,75,0	0/0:22,0:22:66.22:0,66,1049	0/0:32,0:32:96.33:0,96,1532	0/0:32,0:32:96.31:0,96,1474	0/0:34,0:34:99:0,99,1526	1/1:0,17:17:51.17:705,51,0	1/1:0,12:12:33.07:439,33,0	0/0:24,0:24:69.22:0,69,1073	0/0:12,0:12:33.11:0,33,523	0/0:25,0:25:75.26:0,75,1198	1/1:0,27:27:78.22:1069,78,0	1/1:0,36:36:99:1427,102,0	1/1:0,30:30:84.28:1175,84,0	1/1:0,18:18:48.16:671,48,0	0/0:23,0:23:69.24:0,69,1099	0/0:21,0:21:57.19:0,57,911	0/0:28,0:28:84.26:0,84,1291	0/0:19,0:19:54.18:0,54,863	1/1:0,25:25:60.12:796,60,0	1/1:0,27:27:78.26:1091,78,0	1/1:0,15:15:42.14:582,42,0	1/1:0,31:31:93.31:1300,93,0	1/1:0,13:13:33.11:461,33,0	1/1:0,7:7:21.07:294,21,0
chr10	11194217	.	T	TTA	14760.01	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-7.320;DP=691;FS=9.276;HRun=0;HaplotypeScore=79.9206;InbreedingCoeff=0.9963;MQ=75.47;MQ0=2;MQRankSum=-0.085;QD=48.71;ReadPosRankSum=4.076;VQSLOD=5.5616;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,153,2388	1/1:0,10:11:27.09:547,27,0	0/0:23,0:22:63.17:0,63,912	0/0:25,0:22:12.98:0,13,603	0/0:25,0:25:75.26:0,75,1211	0/0:20,0:20:60.19:0,60,950	0/0:19,0:19:54.15:0,54,831	0/0:35,0:35:99:0,102,1536	0/0:16,0:16:45.14:0,45,710	1/1:2,20:22:63.08:1108,63,0	1/1:1,18:19:42.14:828,42,0	0/0:16,0:16:48.14:0,48,736	0/0:18,0:18:54.15:0,54,831	0/0:15,0:15:42.13:0,42,660	1/1:1,29:30:69.22:1397,69,0	1/1:0,22:22:51.18:1035,51,0	1/1:0,37:39:99:2066,102,0	1/1:0,27:27:60.21:1210,60,0	0/0:23,0:23:69.22:0,69,1079	0/0:25,0:25:75.24:0,75,1180	0/0:24,0:24:69.22:0,69,1099	0/0:29,0:29:84.28:0,84,1362	1/1:0,20:20:54.07:1087,54,0	1/1:2,27:29:57.20:1156,57,0	0/0:23,0:23:69.24:0,69,1123	1/1:1,28:30:90.30:1778,90,0	1/1:0,32:32:87.30:1757,87,0	1/1:2,18:21:39.13:791,39,0
chr10	11194699	.	G	GA	4883.50	PASS	AB=0.556;AC=27;AF=0.500;AN=54;BaseQRankSum=-10.541;DP=405;FS=21.835;HRun=9;HaplotypeScore=92.7160;InbreedingCoeff=0.9290;MQ=64.66;MQ0=3;MQRankSum=-2.389;QD=21.90;ReadPosRankSum=-1.425;VQSLOD=3.3209;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,20:28:24.76:419,25,0	0/0:1,0:7:12.22:0,12,36	0/0:17,0:11:20.24:0,20,181	0/0:16,0:13:26.56:0,27,212	1/1:4,17:21:36.02:371,36,0	1/1:3,10:13:29.97:292,30,0	0/1:2,8:10:1.98:208,0,2	1/1:6,6:12:18.05:199,18,0	1/1:0,10:10:27.04:286,27,0	0/0:2,0:15:24:0,24,70	0/0:0,0:10:18.33:0,18,54	1/1:2,17:19:48.09:517,48,0	1/1:7,7:14:23.98:238,24,0	1/1:1,8:9:24.02:252,24,0	0/0:2,0:10:16.30:0,16,48	0/0:0,0:7:12.22:0,12,36	0/0:4,0:22:34.62:0,35,101	0/0:3,0:8:10.18:0,10,30	1/1:7,10:18:38.85:412,39,0	1/1:4,23:27:60.12:650,60,0	1/1:2,8:10:18.05:199,18,0	1/1:2,12:14:36.02:372,36,0	0/0:1,0:12:14.24:0,14,42	0/0:4,0:25:32.58:0,33,95	1/1:2,16:18:42.11:465,42,0	0/0:3,0:19:32.15:0,32,93	0/0:1,0:13:20.37:0,20,60	./.
chr10	11194815	.	G	GC	77.33	PASS	AB=0.929;AC=9;AF=0.173;AN=52;BaseQRankSum=5.200;DP=378;FS=42.795;HRun=0;HaplotypeScore=128.4537;InbreedingCoeff=0.0700;MQ=27.40;MQ0=102;MQRankSum=-1.561;QD=0.61;ReadPosRankSum=2.503;VQSLOD=0.7643;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:12:11.25:0,11,152	0/0:5,0:1:3:0,3,26	./.	./.	1/1:16,0:12:2.07:11,2,0	0/1:29,4:27:99:111,0,276	0/0:20,0:16:6.35:0,6,195	0/0:18,0:11:27.29:0,27,268	0/0:18,0:16:10.19:0,10,156	0/0:9,0:8:23.82:0,24,276	1/1:7,0:4:1.25:3,1,0	0/1:9,0:7:16.59:41,0,17	0/0:7,0:7:10.42:0,10,75	0/1:14,0:12:4.38:4,0,103	0/0:8,0:7:19.35:0,19,217	0/0:8,0:6:14.50:0,15,147	0/0:7,0:3:3.01:0,3,42	0/0:6,0:6:5.52:0,6,101	0/0:16,0:13:14.62:0,15,274	0/0:24,0:20:14.33:0,14,189	0/0:4,0:2:2.50:0,2,9	0/1:20,0:16:15.66:16,0,27	0/0:7,0:4:6.02:0,6,83	0/0:13,0:13:6.02:0,6,83	0/1:20,1:17:0.19:0,0,227	0/0:13,0:9:26.61:0,27,272	0/0:6,0:6:15.01:0,15,184	0/0:47,0:5:10.09:0,10,95
chr10	11194816	.	A	AG	1189.48	PASS	AB=0.983;AC=23;AF=0.442;AN=52;BaseQRankSum=9.518;DP=393;FS=151.419;HRun=2;HaplotypeScore=143.1086;InbreedingCoeff=-0.1360;MQ=27.56;MQ0=102;MQRankSum=-2.016;QD=4.29;ReadPosRankSum=3.798;VQSLOD=0.2104;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:17,0:13:23:23,0,137	1/1:5,0:1:0.47:1,0,0	./.	./.	1/1:18,0:13:19.87:104,20,0	0/1:31,2:27:99:209,0,177	0/1:20,0:16:5.72:6,0,129	0/1:18,0:11:8.60:9,0,189	0/1:19,0:17:31.91:66,0,32	0/1:10,0:9:12.26:12,0,99	1/1:10,0:4:2.60:10,3,0	1/1:14,0:10:21.33:192,21,0	0/1:6,1:7:7.69:30,0,8	0/1:15,0:13:23.55:184,0,24	0/0:8,0:7:2.86:0,3,69	0/1:8,0:6:9.80:10,0,50	0/0:7,0:3:3.01:0,3,38	0/1:5,0:6:10.60:11,0,11	0/1:16,0:13:65.71:66,0,120	0/0:24,0:20:9.39:0,9,166	0/0:4,0:2:2.99:0,3,24	1/1:24,0:19:28.57:261,29,0	0/0:7,0:4:6:0,6,60	0/0:13,0:13:6.03:0,6,52	0/1:23,1:20:57.22:133,0,57	0/1:13,0:9:17.11:17,0,140	0/0:6,0:6:10.25:0,10,86	0/0:47,0:5:10.28:0,10,89
chr10	11194819	.	A	AG	2501.45	PASS	AB=0.890;AC=22;AF=0.423;AN=52;BaseQRankSum=9.764;DP=403;FS=124.394;HRun=1;HaplotypeScore=130.6016;InbreedingCoeff=-0.3522;MQ=28.10;MQ0=102;MQRankSum=-2.538;QD=8.60;ReadPosRankSum=7.046;VQSLOD=0.5646;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:11,6:13:53.64:54,0,213	0/0:5,0:1:2.04:0,2,6	./.	./.	0/1:15,3:13:1.27:187,0,1	0/1:28,5:27:99:433,0,268	0/1:10,10:16:16.32:16,0,156	0/1:18,0:11:99:113,0,202	0/1:16,3:17:97.16:289,0,97	0/1:10,0:9:60.98:61,0,139	1/1:10,0:4:3:27,3,0	1/1:14,1:11:4.31:125,4,0	0/1:3,4:7:25.48:91,0,25	0/1:13,2:13:50.53:177,0,51	0/1:8,0:7:16.67:17,0,74	0/1:11,0:9:29.01:29,0,57	0/0:8,0:4:5.81:0,6,51	0/1:6,0:6:8.58:9,0,18	0/1:12,4:13:99:279,0,122	0/0:26,0:22:8.96:0,9,301	0/0:5,0:3:3.01:0,3,40	1/1:21,4:20:19.57:387,20,0	0/0:7,0:4:6.02:0,6,71	0/0:13,0:13:7.01:0,7,61	0/1:22,2:20:99:208,0,178	0/1:13,0:9:99:123,0,138	0/1:6,0:6:28.91:29,0,88	0/0:48,0:6:13.75:0,14,107
chr10	11196429	.	TGA	T	11406.88	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=20.218;DP=652;FS=2.935;HRun=0;HaplotypeScore=123.8561;InbreedingCoeff=0.9995;MQ=83.61;MQ0=0;MQRankSum=-2.326;QD=43.87;ReadPosRankSum=4.166;VQSLOD=6.4058;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,129,2581	1/1:0,16:16:48.16:781,48,0	0/0:22,0:22:66.23:0,66,1303	0/0:17,0:17:24.90:0,25,782	0/0:18,0:18:54.19:0,54,1086	0/0:18,0:18:54.19:0,54,1086	0/0:33,0:33:99:0,99,2011	0/0:33,0:33:99:0,99,1912	0/0:19,0:19:57.20:0,57,1157	1/1:0,23:23:66.23:1076,66,0	1/1:0,15:15:42.14:673,42,0	0/0:27,0:27:81.28:0,81,1644	0/0:20,0:20:60.19:0,60,1182	0/0:22,0:22:66.23:0,66,1341	1/1:0,24:24:63.22:1026,63,0	1/1:0,25:25:69.23:1103,69,0	1/1:0,33:33:78.26:1256,78,0	1/1:0,19:19:54.18:881,54,0	0/0:18,0:18:54.19:0,54,1067	0/0:23,0:23:69.21:0,69,1328	0/0:42,0:42:99:0,123,2437	0/0:18,0:18:48.15:0,48,924	1/1:0,22:22:57.19:917,57,0	1/1:0,24:24:69.24:1114,69,0	0/0:19,0:19:54.16:0,54,1050	1/1:0,32:32:93.32:1517,93,0	1/1:0,16:16:42.14:673,42,0	1/1:0,11:11:24.08:391,24,0
chr10	11197258	.	A	ACAGGCTT	20758.60	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-5.810;DP=653;FS=2.658;HRun=0;HaplotypeScore=145.0051;InbreedingCoeff=0.9994;MQ=83.37;MQ0=0;MQRankSum=-18.389;QD=85.78;ReadPosRankSum=-0.770;VQSLOD=5.4482;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,144,3708	1/1:5,4:10:24.08:746,24,0	0/0:23,0:23:39.95:0,40,1483	0/0:26,0:26:64.65:0,65,1411	0/0:19,0:19:57.20:0,57,1436	0/0:14,0:14:42.13:0,42,1037	0/0:21,0:21:51.18:0,51,1325	0/0:34,0:34:93.31:0,93,2311	0/0:17,0:17:48.16:0,48,1243	1/1:6,22:30:87.28:3043,87,0	1/1:6,7:14:36.08:992,36,0	0/0:21,0:21:63.20:0,63,1529	0/0:13,0:13:36.12:0,36,935	0/0:25,0:25:72.25:0,72,1870	1/1:4,17:22:60.16:2108,60,0	1/1:4,14:21:51.18:1924,51,0	1/1:4,13:18:39.09:1221,39,0	1/1:5,6:16:30.10:1184,30,0	0/0:17,0:17:45.13:0,45,1011	0/0:24,0:24:72.23:0,72,1787	0/0:66,0:66:99:0,187,4614	0/0:17,0:17:45.15:0,45,1133	1/1:6,14:24:53.88:1424,54,0	1/1:10,8:22:35.73:1370,36,0	0/0:21,0:21:60.21:0,60,1533	1/1:11,19:31:87.28:3177,87,0	1/1:3,20:25:69.19:2648,69,0	1/1:3,6:9:27.09:921,27,0
chr10	11203278	.	T	TA	874.37	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-6.362;DP=631;FS=0.677;HRun=9;HaplotypeScore=57.9694;InbreedingCoeff=0.9244;MQ=72.42;MQ0=0;MQRankSum=-0.310;QD=22.42;ReadPosRankSum=-1.055;VQSLOD=3.9740;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:77.98:0,78,677	0/0:9,0:9:20.96:0,21,176	0/0:13,0:13:14.92:0,15,120	0/0:7,0:7:5.99:0,6,52	1/1:4,18:22:54.04:564,54,0	0/0:32,0:33:88.99:0,89,755	0/0:14,0:14:35.95:0,36,303	0/0:30,0:30:68.98:0,69,599	0/0:27,0:28:71:0,71,602	0/0:20,0:20:47.99:0,48,417	0/0:19,0:19:50.94:0,51,434	0/0:33,0:33:89.98:0,90,781	0/0:20,0:20:50.93:0,51,433	0/0:19,0:19:47.98:0,48,417	0/0:18,0:18:53.93:0,54,461	0/0:22,0:22:65.99:0,66,573	0/0:45,0:44:99:0,114,989	0/0:20,0:20:53.98:0,54,465	0/0:26,0:26:71.96:0,72,617	0/0:27,0:27:62.97:0,63,547	0/0:21,0:21:50.98:0,51,443	0/0:24,0:24:65.95:0,66,568	0/0:25,0:25:62.85:0,63,535	0/0:30,0:31:80.01:0,80,683	1/1:3,14:17:39.11:431,39,0	0/0:29,1:30:44.82:0,45,615	0/0:25,0:24:65.98:0,66,573	0/0:4,0:4:12:0,12,104
chr10	11204005	.	ATCT	A	17898.78	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-2.447;DP=704;FS=19.237;HRun=0;HaplotypeScore=101.2682;InbreedingCoeff=0.9886;MQ=71.58;MQ0=0;MQRankSum=-1.676;QD=26.79;ReadPosRankSum=5.420;VQSLOD=3.2193;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,38:42:75.25:1091,75,0	1/1:3,6:9:18.06:262,18,0	0/0:26,0:23:33.10:0,33,588	0/0:10,0:10:18.03:0,18,248	1/1:5,19:24:53.73:679,54,0	1/1:3,23:26:48.16:698,48,0	1/1:6,11:17:21.07:305,21,0	1/1:10,23:33:69.14:887,69,0	1/1:4,20:24:48.16:698,48,0	1/1:8,19:27:57.10:732,57,0	1/1:5,13:18:33.03:433,33,0	1/1:9,24:33:66.22:954,66,0	1/1:5,19:24:36.12:524,36,0	1/1:3,17:20:36.12:524,36,0	1/1:7,18:25:33.11:480,33,0	1/1:2,19:21:48.16:698,48,0	1/1:5,35:40:87.29:1265,87,0	1/1:4,27:31:66.22:960,66,0	1/1:8,15:23:45.08:560,45,0	1/1:4,11:16:35.97:431,36,0	1/1:12,33:45:69.15:956,69,0	1/1:5,21:26:59.93:729,60,0	1/1:8,11:19:29.86:436,30,0	1/1:3,23:26:51.14:720,51,0	1/1:3,20:23:36.04:496,36,0	1/1:11,27:38:81.23:1120,81,0	1/1:2,20:22:51.16:740,51,0	1/1:4,12:16:36.12:523,36,0
chr10	11204527	.	CCCTGCCACCCGCCA	C	3053.11	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=8.214;DP=474;FS=17.546;HRun=0;HaplotypeScore=182.6024;InbreedingCoeff=0.9357;MQ=72.25;MQ0=1;MQRankSum=-8.582;QD=53.56;ReadPosRankSum=1.323;VQSLOD=2.2983;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:7,8:15:18.06:710,18,0	0/0:8,0:8:18.06:0,18,1121	0/0:9,0:8:14.54:0,15,487	0/0:11,0:11:18.53:0,19,801	0/0:10,0:10:24.08:0,24,1311	1/1:4,9:13:27.09:1051,27,0	1/1:12,12:24:27.09:1085,27,0	0/0:20,0:20:39.13:0,39,1944	1/1:2,3:5:9.03:362,9,0	0/0:13,0:13:30.10:0,30,1874	0/0:5,0:5:6.02:0,6,401	0/0:15,0:15:40.38:0,40,2491	0/0:10,0:10:24.08:0,24,1420	0/0:28,0:28:69.24:0,69,4236	0/0:10,0:10:30.10:0,30,1840	0/0:19,0:19:42.14:0,42,2779	0/0:37,0:37:99:0,102,6681	0/0:24,0:24:60.21:0,60,3933	0/0:15,0:15:24.08:0,24,1619	0/0:6,0:6:15.05:0,15,1002	0/0:65,0:65:99:0,144,8461	0/0:12,0:12:33.11:0,33,1904	0/0:11,0:11:21.07:0,21,1189	0/0:30,0:30:81.28:0,81,5456	0/0:15,0:15:30.10:0,30,1726	0/0:21,0:21:51.18:0,51,3142	0/0:14,0:14:36.12:0,36,2260	0/0:9,0:9:27.09:0,27,1171
chr10	11204760	.	AG	A	5411.52	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=9.563;DP=646;FS=6.254;HRun=1;HaplotypeScore=69.6408;InbreedingCoeff=0.9989;MQ=80.44;MQ0=0;MQRankSum=-0.609;QD=41.31;ReadPosRankSum=1.895;VQSLOD=5.4852;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,47:47:99:1930,138,0	0/0:8,0:8:24.08:0,24,384	0/0:14,0:14:39.11:0,39,583	0/0:18,0:18:48.10:0,48,677	0/0:10,0:10:30.10:0,30,480	1/1:0,34:34:99:1384,99,0	1/1:0,31:31:93.31:1300,93,0	0/0:31,0:31:93.32:0,93,1488	1/1:0,19:19:57.19:797,57,0	0/0:27,0:27:81.28:0,81,1290	0/0:10,0:10:26.94:0,27,408	0/0:26,0:26:78.27:0,78,1247	0/0:23,0:23:69.24:0,69,1102	0/0:24,0:24:72.22:0,72,1124	0/0:29,0:29:87.28:0,87,1364	0/0:14,0:14:42.14:0,42,672	0/0:25,0:25:75.24:0,75,1175	0/0:23,0:23:63.17:0,63,969	0/0:26,0:26:78.27:0,78,1245	0/0:13,0:13:39.13:0,39,624	0/0:52,0:51:99:0,153,2398	0/0:18,0:18:54.18:0,54,863	0/0:17,0:17:51.17:0,51,815	0/0:29,0:29:87.30:0,87,1389	0/0:13,0:13:39.13:0,39,624	0/0:26,0:26:75.26:0,75,1200	0/0:22,0:22:66.23:0,66,1055	0/0:17,0:17:48.14:0,48,736
chr10	11205192	.	AT	A	1503.06	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=6.770;DP=453;FS=2.453;HRun=8;HaplotypeScore=50.4505;InbreedingCoeff=0.9487;MQ=75.34;MQ0=4;MQRankSum=1.857;QD=21.47;ReadPosRankSum=-1.631;VQSLOD=3.2127;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:75.18:0,75,878	0/0:6,0:6:15.05:0,15,180	0/0:27,0:13:30.33:0,30,284	0/0:33,0:19:23.77:0,24,275	0/0:25,0:25:66.19:0,66,785	0/0:17,0:17:48.13:0,48,567	0/0:6,0:6:12.04:0,12,145	1/1:3,28:31:81.11:775,81,0	0/0:12,0:12:33.09:0,33,388	0/0:18,0:18:48.15:0,48,580	0/0:13,0:13:30.09:0,30,362	0/0:12,0:12:30.04:0,30,345	0/0:11,0:11:27.08:0,27,326	0/0:8,0:8:24.02:0,24,264	0/0:13,0:13:36.11:0,36,435	0/0:8,0:8:21.06:0,21,254	0/0:20,0:20:51.15:0,51,609	0/0:20,0:20:57.17:0,57,687	1/1:4,9:13:27.04:261,27,0	1/1:2,17:19:51.02:480,51,0	1/1:2,5:7:15.02:145,15,0	0/0:4,0:4:6.02:0,6,72	0/0:8,0:8:24.07:0,24,288	0/0:6,0:6:18.02:0,18,202	0/0:22,0:22:66.12:0,66,777	0/0:19,0:19:45.14:0,45,544	0/0:28,0:28:84.22:0,84,983	0/0:18,0:18:39.11:0,39,460
chr10	11205347	.	T	TG	570.48	PASS	AB=0.766;AC=6;AF=0.107;AN=56;BaseQRankSum=-0.603;DP=479;FS=0.743;HRun=9;HaplotypeScore=56.2906;InbreedingCoeff=0.2538;MQ=62.52;MQ0=3;MQRankSum=-0.167;QD=6.87;ReadPosRankSum=-1.065;VQSLOD=0.5161;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,2:34:83.96:0,84,726	0/0:4,0:4:5.99:0,6,52	0/1:11,0:9:12.66:13,0,53	0/0:10,0:6:5.73:0,6,52	0/0:16,0:16:32.99:0,33,286	0/0:19,0:19:38.98:0,39,339	0/0:14,1:16:4.13:0,4,258	0/1:7,11:13:8.03:135,0,8	0/0:23,0:23:53.97:0,54,469	0/0:16,0:17:38:0,38,317	0/0:15,0:15:43.81:0,44,370	0/0:23,0:23:56.95:0,57,488	0/0:9,0:9:23.98:0,24,208	0/0:11,0:11:20.99:0,21,182	0/0:23,0:23:56.94:0,57,488	0/0:17,0:17:41.95:0,42,357	0/0:40,0:41:86.77:0,87,821	0/0:19,0:19:47.97:0,48,416	0/1:12,3:14:17.03:57,0,17	1/1:4,7:11:17.90:167,18,0	0/1:10,18:28:13:326,0,13	0/0:9,0:9:21:0,21,182	0/0:9,0:9:17.98:0,18,156	0/0:18,0:18:44.98:0,45,391	0/0:17,0:17:35.97:0,36,312	0/0:12,0:13:26.02:0,26,213	0/0:22,0:22:56.98:0,57,495	0/0:11,0:11:20.97:0,21,182
chr10	11205786	.	T	TTTG	1528.98	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-4.048;DP=764;FS=1.527;HRun=0;HaplotypeScore=110.3117;InbreedingCoeff=0.9639;MQ=63.73;MQ0=1;MQRankSum=-2.106;QD=28.31;ReadPosRankSum=-1.296;VQSLOD=3.3969;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:84.24:0,84,1141	0/0:10,0:10:15.05:0,15,214	0/0:17,0:12:14.98:0,15,180	0/0:32,0:31:49.31:0,49,610	1/1:14,14:28:33.58:669,34,0	0/0:36,0:36:81.27:0,81,1154	0/0:29,0:29:66.15:0,66,851	0/0:26,0:26:48.14:0,48,647	0/0:29,0:29:81.25:0,81,1120	0/0:30,0:30:60.18:0,60,822	0/0:27,0:27:45.15:0,45,641	0/0:25,0:25:54.17:0,54,752	0/0:24,0:24:51.15:0,51,707	0/0:33,0:33:81.27:0,81,1153	0/0:25,0:25:72.21:0,72,988	0/0:44,0:44:99:0,102,1418	0/0:31,0:31:72.23:0,72,1009	0/0:26,0:26:54.15:0,54,748	0/0:20,0:20:34.35:0,34,456	0/0:29,0:29:60.19:0,60,836	0/0:40,0:40:99:0,102,1453	0/0:18,0:18:30.06:0,30,375	0/0:21,0:21:48.14:0,48,647	0/0:29,0:29:75.25:0,75,1069	1/1:8,18:26:11.43:976,11,0	0/0:22,0:22:42.12:0,42,567	0/0:35,0:35:69.23:0,69,983	0/0:10,0:10:24.04:0,24,319
chr10	11207758	.	T	TACAC	3060.68	PASS	AB=0.875;AC=46;AF=0.920;AN=50;BaseQRankSum=-0.198;DP=599;FS=8.755;HRun=0;HaplotypeScore=119.7534;InbreedingCoeff=-0.1827;MQ=62.22;MQ0=13;MQRankSum=0.244;QD=6.08;ReadPosRankSum=0.849;VQSLOD=1.4623;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:31:3.90:72,4,0	1/1:8,1:13:14.72:189,15,0	./.	./.	1/1:10,1:11:3.01:70,3,0	1/1:15,0:15:9.03:165,9,0	1/1:34,1:34:20.43:259,20,0	1/1:25,0:24:3.01:39,3,0	1/1:7,1:11:6.02:123,6,0	1/1:26,0:25:18.05:263,18,0	./.	1/1:22,2:27:3.75:71,4,0	1/1:7,2:13:8.62:152,9,0	0/1:18,0:17:8.36:55,0,8	1/1:15,7:21:5.67:140,6,0	1/1:14,4:19:5.87:127,6,0	1/1:13,8:25:6.02:139,6,0	1/1:13,6:19:7.84:124,8,0	1/1:17,0:17:6.02:79,6,0	1/1:15,0:17:3.01:70,3,0	0/1:44,0:42:10.88:344,0,11	1/1:13,0:13:8.89:79,9,0	1/1:13,0:16:2.97:67,3,0	0/1:20,3:30:37.09:131,0,37	1/1:10,2:15:7.58:142,8,0	1/1:20,0:20:4.42:45,4,0	0/1:8,1:12:7.37:98,0,7	1/1:5,0:4:6.49:124,6,0
chr10	11211617	.	TCTCTCACACACA	T	2401.08	PASS	AB=0.969;AC=21;AF=0.375;AN=56;BaseQRankSum=0.817;DP=546;FS=11.071;HRun=0;HaplotypeScore=172.2188;InbreedingCoeff=-0.2028;MQ=52.82;MQ0=23;MQRankSum=-0.633;QD=6.19;ReadPosRankSum=-2.278;VQSLOD=1.2702;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:63.42:0,63,2139	0/1:14,0:13:61.89:62,0,149	0/0:3,0:2:3.90:0,4,103	0/0:3,0:2:5.85:0,6,132	0/1:22,0:21:10.10:10,0,580	0/0:17,0:16:8.58:0,9,261	0/0:10,0:8:9.03:0,9,268	0/0:16,0:14:20.19:0,20,535	0/0:26,0:25:12.46:0,12,440	0/1:23,0:23:99:245,0,368	1/1:12,0:11:0.94:2,1,0	0/1:28,0:29:99:102,0,161	1/1:28,0:28:28.74:675,29,0	0/1:18,0:16:59.75:60,0,75	0/0:20,0:19:12.04:0,12,247	0/1:21,0:21:15.33:15,0,391	0/1:27,0:25:99:262,0,703	0/1:12,0:11:81.27:81,0,411	0/1:18,0:16:32.15:32,0,1001	0/0:16,0:16:26.93:0,27,969	0/1:34,0:30:52.17:52,0,1385	0/1:3,10:13:0.41:0,0,1	0/0:14,0:14:9.83:0,10,263	0/1:54,0:53:99:536,0,1084	0/1:14,0:13:67.85:68,0,697	0/1:23,0:21:99:264,0,352	0/1:19,0:18:17.81:18,0,330	1/1:7,0:4:5.86:75,6,0
chr10	11211621	.	TCACACA	T	4364.03	PASS	AB=0.797;AC=24;AF=0.444;AN=54;BaseQRankSum=-6.327;DP=562;FS=11.129;HRun=0;HaplotypeScore=130.8298;InbreedingCoeff=0.6296;MQ=52.91;MQ0=23;MQRankSum=-0.066;QD=14.36;ReadPosRankSum=2.587;VQSLOD=2.9529;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:50.91:0,51,1232	1/1:8,0:13:5.76:126,6,0	0/0:5,0:2:3.48:0,3,75	0/0:5,0:2:5.89:0,6,104	0/0:22,0:21:22.20:0,22,406	0/0:10,0:18:6.02:0,6,152	0/0:12,0:10:12.04:0,12,275	0/0:21,0:19:34:0,34,749	0/0:9,0:24:9.30:0,9,217	1/1:13,10:23:15.45:538,15,0	./.	1/1:15,0:27:12.04:190,12,0	1/1:11,0:28:23.47:415,23,0	1/1:7,0:16:3.01:52,3,0	0/1:8,12:19:0:0,0,0	0/1:9,11:20:50.76:51,0,68	1/1:25,0:25:45.19:819,45,0	0/1:10,0:10:2.93:248,0,3	0/0:22,0:19:44.34:0,44,869	0/0:19,0:19:33.03:0,33,886	0/0:35,0:31:52.72:0,53,1166	0/1:12,0:12:0.01:0,0,0	0/0:8,6:14:3.01:0,3,34	1/1:48,0:52:46.93:1209,47,0	0/0:14,0:13:29.25:0,29,728	1/1:13,10:22:2.79:508,3,0	1/1:12,8:20:5.72:83,6,0	1/1:6,0:4:6.02:125,6,0
chr10	11212703	.	AACACACAC	A	5320.76	PASS	AB=0.788;AC=34;AF=0.739;AN=46;BaseQRankSum=2.349;DP=547;FS=7.077;HRun=0;HaplotypeScore=154.6867;InbreedingCoeff=0.4054;MQ=64.56;MQ0=15;MQRankSum=0.479;QD=16.03;ReadPosRankSum=1.277;VQSLOD=3.6795;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:34,0:25:3.90:0,4,101	0/0:37,0:21:8.99:0,9,210	0/0:29,0:29:36.12:0,36,1033	./.	1/1:7,0:15:8.98:134,9,0	0/1:17,0:21:7.97:79,0,8	1/1:8,0:17:12.04:240,12,0	1/1:10,10:20:28.30:644,28,0	1/1:6,1:7:9.03:226,9,0	1/1:5,0:11:3.01:60,3,0	1/1:10,0:16:20.58:424,21,0	1/1:13,0:21:8.82:140,9,0	./.	1/1:11,16:27:1.69:43,2,0	1/1:21,2:22:33.01:653,33,0	1/1:16,0:14:24.04:516,24,0	0/1:14,0:14:11.72:90,0,12	0/1:13,1:22:18.95:32,0,19	1/1:21,0:20:17.01:201,17,0	./.	1/1:11,3:15:15.01:272,15,0	1/1:20,2:22:15.05:381,15,0	0/0:19,0:19:45.14:0,45,1174	1/1:21,0:21:41.44:860,41,0	1/1:6,3:8:9.03:207,9,0	0/1:5,5:9:10.79:118,0,11
chr10	11212769	.	GAGAGAGAGAGAGAGAGAGAGAA	G	2348.36	PASS	AB=0.974;AC=14;AF=0.250;AN=56;BaseQRankSum=4.174;DP=585;FS=20.866;HRun=0;HaplotypeScore=245.6872;InbreedingCoeff=0.6286;MQ=46.03;MQ0=36;MQRankSum=2.472;QD=14.41;ReadPosRankSum=3.410;VQSLOD=0.7139;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:57.18:0,57,1180	1/1:10,0:10:10.74:246,11,0	0/0:16,0:5:11.03:0,11,93	0/0:22,0:2:3.01:0,3,35	0/0:24,0:24:29.43:0,29,225	0/0:14,0:13:21.92:0,22,480	0/0:21,0:18:32.95:0,33,1112	0/0:33,0:32:73.19:0,73,874	0/0:20,0:16:30.30:0,30,1003	0/1:20,0:19:20.27:152,0,20	0/0:18,1:19:3.07:0,3,12	0/0:20,0:19:31.47:0,31,885	0/0:22,0:22:20.43:0,20,680	0/0:20,0:20:32.75:0,33,933	0/0:18,0:16:3.01:0,3,182	1/1:14,0:14:11.93:147,12,0	1/1:17,0:16:11.74:211,12,0	1/1:15,0:12:14.56:122,15,0	0/0:21,0:18:44.43:0,44,920	0/0:22,0:22:31.23:0,31,630	0/0:19,0:14:20.52:0,21,360	0/0:19,0:19:27.31:0,27,563	0/1:17,1:17:9.34:83,0,9	0/0:17,1:17:1.41:0,1,2	0/0:22,0:22:23.90:0,24,232	1/1:12,17:27:50.18:1474,50,0	1/1:17,23:39:0.92:85,1,0	0/0:14,0:11:4.86:0,5,14
chr10	11212771	.	GAGAGAGAGAGAGAGAGAGAA	G	2175.42	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=4.514;DP=597;FS=16.237;HRun=0;HaplotypeScore=237.3013;InbreedingCoeff=0.8068;MQ=46.73;MQ0=36;MQRankSum=2.243;QD=13.35;ReadPosRankSum=4.006;VQSLOD=1.2021;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:59.92:0,60,1073	1/1:11,0:11:14.23:224,14,0	0/0:16,0:5:11.03:0,11,93	0/0:25,0:2:3.01:0,3,35	0/0:25,0:25:29.42:0,29,210	0/0:17,0:16:30.46:0,30,487	0/0:22,0:19:35.92:0,36,1010	0/0:35,0:34:88.44:0,88,867	0/0:19,0:15:30.64:0,31,892	1/1:21,0:20:21.91:239,22,0	0/0:7,13:20:0.47:0,0,1	0/0:21,0:20:34.46:0,34,789	0/0:21,0:21:20.13:0,20,547	0/0:23,0:23:41.74:0,42,855	0/0:16,1:15:3.01:0,3,157	1/1:14,0:14:12:125,12,0	1/1:16,0:15:11.94:165,12,0	1/1:14,0:11:14.93:122,15,0	0/0:18,0:15:40.43:0,40,788	0/0:23,0:23:36.62:0,37,569	0/0:19,0:14:19.38:0,19,306	0/0:18,0:18:27.31:0,27,499	1/1:18,0:17:12.27:99,12,0	0/0:9,10:18:0.47:0,0,1	0/0:23,0:23:26.91:0,27,233	1/1:29,0:27:51.80:1319,52,0	1/1:40,0:39:0.96:68,1,0	0/0:15,0:12:5.14:0,5,14
chr10	11213025	.	GTTC	G	1926.27	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.845;DP=717;FS=1.249;HRun=0;HaplotypeScore=99.4158;InbreedingCoeff=0.9991;MQ=89.18;MQ0=0;MQRankSum=-2.196;QD=37.77;ReadPosRankSum=3.808;VQSLOD=4.4368;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,111,2386	0/0:12,0:12:36.12:0,36,797	0/0:26,0:26:72.24:0,72,1519	0/0:32,0:32:93.30:0,93,1990	1/1:3,34:37:96.33:1558,96,0	0/0:24,0:24:63.21:0,63,1343	0/0:25,0:25:72.25:0,72,1609	0/0:38,0:38:99:0,102,2204	0/0:26,0:26:72.25:0,72,1589	0/0:30,0:30:90.14:0,90,1850	0/0:18,0:18:54.16:0,54,1161	0/0:20,0:20:60.21:0,60,1340	0/0:22,0:22:63.22:0,63,1400	0/0:27,0:27:78.27:0,78,1740	0/0:23,0:23:66.23:0,66,1474	0/0:17,0:17:48.16:0,48,1072	0/0:22,0:22:63.22:0,63,1407	0/0:20,0:20:57.20:0,57,1271	0/0:23,0:23:66.23:0,66,1427	0/0:23,0:23:63.22:0,63,1406	0/0:31,0:31:90.31:0,90,1968	0/0:17,0:17:48.16:0,48,1003	0/0:18,0:18:54.17:0,54,1134	0/0:45,0:45:99:0,129,2855	1/1:0,14:14:30.10:490,30,0	0/0:36,0:36:99:0,108,2392	0/0:43,0:43:99:0,123,2703	0/0:9,0:9:27.09:0,27,603
chr10	11213594	.	G	GATCT	2075.32	PASS	AB=0.897;AC=25;AF=0.568;AN=44;BaseQRankSum=-2.247;DP=569;FS=12.932;HRun=0;HaplotypeScore=129.1010;InbreedingCoeff=0.5770;MQ=56.72;MQ0=10;MQRankSum=2.075;QD=7.11;ReadPosRankSum=-0.746;VQSLOD=1.6397;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:21,4:23:33.02:627,33,0	1/1:9,0:9:5.99:49,6,0	./.	./.	1/1:11,15:30:27.09:632,27,0	0/1:15,12:27:37.19:131,0,37	1/1:10,0:8:6.02:139,6,0	0/0:35,0:28:5.98:0,6,47	1/1:11,9:20:21.07:478,21,0	1/1:26,0:26:10.77:73,11,0	./.	0/0:12,0:18:11.99:0,12,106	0/0:8,0:24:24.02:0,24,219	0/0:11,0:24:12.01:0,12,112	1/1:24,0:24:3:25,3,0	1/1:22,0:22:3:25,3,0	./.	0/0:14,0:14:0:0,0,0	0/0:17,0:16:12.03:0,12,164	0/0:29,0:29:54.18:0,54,820	0/0:13,0:13:12.01:0,12,139	./.	0/1:23,0:23:0:0,0,0	0/1:10,0:10:0:0,0,0	./.	1/1:27,0:27:2.39:23,2,0	1/1:15,0:15:0.45:1,0,0	1/1:24,0:22:3.35:20,3,0
chr10	11213629	.	CTATCTATCTATGTATCTATCTATG	C	3967.29	PASS	AB=1.000;AC=17;AF=0.327;AN=52;BaseQRankSum=7.357;DP=602;FS=15.164;HRun=0;HaplotypeScore=269.0905;InbreedingCoeff=0.7994;MQ=53.19;MQ0=15;MQRankSum=-1.565;QD=22.67;ReadPosRankSum=-0.448;VQSLOD=0.9315;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:29:51.23:0,51,1929	1/1:7,0:7:6.02:98,6,0	0/0:22,0:5:14.58:0,15,223	0/0:13,0:2:6:0,6,64	0/0:35,0:34:66.20:0,66,2599	0/0:26,0:26:30.10:0,30,1522	0/0:12,0:10:22.88:0,23,757	0/0:40,0:27:72.08:0,72,1247	0/0:25,0:25:51.17:0,51,2279	1/1:4,25:28:71.92:1063,72,0	./.	0/0:20,0:19:45.14:0,45,1838	0/0:27,0:27:51.16:0,51,1830	0/0:21,0:20:21.07:0,21,961	1/1:24,0:24:18.02:274,18,0	1/1:15,0:15:9.02:111,9,0	1/1:17,0:14:3.47:26,3,0	0/1:16,0:16:17.22:77,0,17	0/0:13,0:10:25.01:0,25,749	0/0:33,0:33:99:0,99,3458	0/0:12,0:12:30.07:0,30,1235	0/0:11,0:11:15.05:0,15,621	0/0:3,24:27:2.97:0,3,20	./.	0/0:25,0:25:24.08:0,24,1321	1/1:1,25:26:62.83:1214,63,0	1/1:19,0:19:32.70:824,33,0	1/1:22,0:18:12.49:281,12,0
chr10	11213633	.	CTATCTATGTATCTATCTATG	C	2123.21	PASS	AB=0.548;AC=17;AF=0.340;AN=50;BaseQRankSum=10.030;DP=626;FS=18.948;HRun=0;HaplotypeScore=251.2760;InbreedingCoeff=0.7818;MQ=52.51;MQ0=20;MQRankSum=-2.197;QD=11.80;ReadPosRankSum=0.295;VQSLOD=1.0039;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:31:57.05:0,57,1902	1/1:8,0:8:3.37:9,3,0	0/0:24,0:7:20.74:0,21,323	0/0:17,0:2:5.91:0,6,56	0/0:34,0:33:60.21:0,60,2159	0/0:28,0:28:36.12:0,36,1546	0/0:12,0:10:25.89:0,26,695	0/0:40,0:27:72.08:0,72,1188	0/0:26,0:26:57.20:0,57,2148	1/1:28,0:27:60.40:739,60,0	./.	0/0:21,0:20:48.16:0,48,1782	0/0:28,0:28:60.19:0,60,1816	0/0:23,0:22:27.09:0,27,1045	1/1:23,0:23:7.56:61,8,0	1/1:19,0:19:4.83:41,5,0	1/1:18,0:15:0.47:1,0,0	0/1:3,14:17:12.85:148,0,13	0/0:15,0:12:32.79:0,33,721	0/0:33,0:33:84.24:0,84,2626	0/0:13,0:13:27.04:0,27,1154	0/0:11,0:11:21.07:0,21,629	./.	./.	0/0:25,0:25:27.09:0,27,1180	1/1:25,0:25:55.66:759,56,0	1/1:20,0:20:25.37:419,25,0	1/1:22,0:18:8.70:118,9,0
chr10	11214715	.	G	GAA	4031.29	PASS	AB=0.577;AC=26;AF=0.464;AN=56;BaseQRankSum=3.693;DP=576;FS=7.475;HRun=10;HaplotypeScore=78.6462;InbreedingCoeff=0.8592;MQ=67.48;MQ0=12;MQRankSum=-1.829;QD=14.82;ReadPosRankSum=-0.195;VQSLOD=1.7332;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,38:45:89.69:1215,90,0	0/0:5,0:5:15.02:0,15,146	0/0:13,0:10:18.79:0,19,152	0/0:16,0:13:21.82:0,22,167	1/1:21,0:19:33.01:307,33,0	1/1:1,12:15:20.51:237,21,0	1/1:4,23:28:64.98:855,65,0	1/1:13,0:41:12.63:199,13,0	1/1:2,16:18:26.58:368,27,0	0/0:23,0:22:54.07:0,54,537	0/0:12,0:12:24.48:0,24,237	1/1:2,0:21:24:221,24,0	1/1:7,0:11:15.02:143,15,0	1/1:2,0:6:5.98:50,6,0	0/0:22,0:21:60.10:0,60,603	0/0:23,0:23:57.03:0,57,571	0/0:40,0:41:92.75:0,93,889	0/0:21,0:23:59.51:0,60,552	0/1:4,0:14:1.29:87,0,1	0/1:4,0:14:6.03:48,0,6	1/1:4,0:15:16.70:76,17,0	1/1:2,0:7:5.97:48,6,0	0/0:16,0:15:33.03:0,33,328	0/0:44,0:45:99:0,110,1060	1/1:12,0:11:20.98:179,21,0	0/0:20,0:17:26.67:0,27,311	0/0:31,0:29:71.12:0,71,685	0/0:13,0:12:27.03:0,27,274
chr10	11214724	.	A	AAC	1615.49	PASS	AB=1.000;AC=12;AF=0.214;AN=56;BaseQRankSum=4.447;DP=581;FS=6.555;HRun=0;HaplotypeScore=90.9571;InbreedingCoeff=0.5303;MQ=70.41;MQ0=9;MQRankSum=-1.014;QD=10.03;ReadPosRankSum=4.487;VQSLOD=2.6607;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:40,0:40:47.12:428,47,0	0/0:8,0:8:20.78:0,21,218	0/0:17,0:14:23.46:0,23,259	0/0:21,0:18:37.43:0,37,407	1/1:4,14:17:33.11:540,33,0	0/1:16,0:16:52.86:53,0,64	0/1:29,0:29:18.41:272,0,18	0/0:42,0:42:84.41:0,84,502	0/1:19,0:18:6.82:119,0,7	0/0:23,0:22:60.15:0,60,720	0/0:14,0:14:33.02:0,33,362	0/1:20,0:20:8.86:16,0,9	0/0:11,0:11:4.32:0,4,76	0/0:6,0:6:6.44:0,6,46	0/0:24,0:23:69.12:0,69,849	0/0:23,0:23:57.18:0,57,720	0/0:39,0:39:90.21:0,90,1084	0/0:23,0:23:63.11:0,63,747	0/0:17,0:17:26.63:0,27,166	0/0:18,0:17:35.30:0,35,204	0/0:16,0:16:37.70:0,38,199	1/1:6,0:6:2.51:7,3,0	0/0:12,0:12:33.06:0,33,406	0/0:43,0:43:99:0,114,1402	1/1:0,11:11:21.07:346,21,0	0/0:19,0:16:38.70:0,39,459	0/0:32,0:30:81.16:0,81,928	0/0:11,0:10:27.09:0,27,347
chr10	11215275	.	C	CT	419.67	PASS	AB=0.700;AC=3;AF=0.054;AN=56;BaseQRankSum=-0.810;DP=540;FS=3.072;HRun=10;HaplotypeScore=56.7494;InbreedingCoeff=0.5472;MQ=68.89;MQ0=1;MQRankSum=-0.238;QD=10.76;ReadPosRankSum=1.087;VQSLOD=2.7597;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:39:99:0,101,814	0/0:6,0:6:11.97:0,12,99	0/0:16,0:12:11.28:0,11,78	0/0:9,0:6:6.75:0,7,42	0/1:12,8:21:19.43:193,0,19	0/0:23,0:23:62.90:0,63,512	0/0:20,0:20:43.98:0,44,351	0/0:36,0:36:80.78:0,81,653	0/0:12,0:12:32.93:0,33,268	0/0:18,0:18:38.91:0,39,315	0/0:10,0:9:20.97:0,21,172	0/0:24,0:25:59.40:0,59,489	0/0:14,0:15:34.98:0,35,274	0/0:17,0:17:35.94:0,36,295	0/0:17,0:17:47.93:0,48,391	0/0:19,0:21:49.97:0,50,400	0/0:31,0:33:84.95:0,85,673	0/0:28,0:29:73.94:0,74,597	0/0:22,1:25:34.06:0,34,453	0/0:11,0:11:26.93:0,27,218	0/0:25,0:25:53.12:0,53,426	0/0:5,0:6:14.92:0,15,123	0/0:17,0:17:44.87:0,45,368	0/0:14,0:15:40.95:0,41,320	1/1:5,13:18:11.44:326,11,0	0/0:22,0:22:65.89:0,66,537	0/0:21,0:22:55.97:0,56,449	0/0:12,0:11:29.97:0,30,246
chr10	11216373	.	GGTCCCC	G	5750.67	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=13.830;DP=737;FS=5.864;HRun=0;HaplotypeScore=154.2288;InbreedingCoeff=0.9838;MQ=77.15;MQ0=0;MQRankSum=-10.685;QD=50.44;ReadPosRankSum=-3.121;VQSLOD=4.0262;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,123,4195	0/0:17,0:17:48.16:0,48,1688	0/0:18,0:18:51.17:0,51,1609	0/0:15,0:15:29.06:0,29,1155	0/0:29,0:29:87.30:0,87,3056	0/0:28,0:28:84.27:0,84,2820	0/0:26,0:26:78.24:0,78,2673	1/1:4,28:32:84.21:1759,84,0	0/0:28,0:28:84.29:0,84,2987	0/0:30,0:30:84.29:0,84,2900	0/0:17,0:17:45.14:0,45,1494	0/0:39,0:39:99:0,114,4027	0/0:24,0:24:72.25:0,72,2576	0/0:26,0:26:78.27:0,78,2811	0/0:29,0:29:87.30:0,87,3043	0/0:32,0:32:96.32:0,96,3324	0/0:30,0:30:87.30:0,87,2846	0/0:19,0:19:57.20:0,57,1988	1/1:3,22:25:66.16:1413,66,0	1/1:1,32:33:75.21:1748,75,0	1/1:5,19:24:39.02:831,39,0	0/0:23,0:23:66.23:0,66,2312	0/0:23,0:23:66.22:0,66,2266	0/0:43,0:43:99:0,126,4418	0/0:26,0:26:78.27:0,78,2708	0/0:27,0:27:81.28:0,81,2830	0/0:28,0:27:78.27:0,78,2748	0/0:3,0:3:9.03:0,9,324
chr10	11218744	.	TCTTC	T	6565.11	PASS	AC=42;AF=0.808;AN=52;BaseQRankSum=10.543;DP=640;FS=1.839;HRun=0;HaplotypeScore=144.4590;InbreedingCoeff=0.8628;MQ=61.73;MQ0=5;MQRankSum=-4.317;QD=14.03;ReadPosRankSum=1.531;VQSLOD=4.5339;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:19:8.94:69,9,0	1/1:1,0:7:14.71:151,15,0	./.	./.	1/1:12,0:33:30.49:248,30,0	1/1:9,0:20:14.76:124,15,0	1/1:17,0:28:14.92:121,15,0	0/0:41,0:36:3.01:0,3,54	1/1:12,0:31:41.93:362,42,0	1/1:15,18:32:51.14:762,51,0	1/1:9,12:21:33.03:460,33,0	1/1:10,0:26:35.07:279,35,0	1/1:4,0:9:12.06:90,12,0	1/1:6,0:15:15.85:87,16,0	1/1:6,0:27:45.08:458,45,0	1/1:8,17:25:42.03:633,42,0	1/1:9,14:23:18.06:279,18,0	1/1:13,14:27:30.10:465,30,0	0/0:19,0:19:15.05:0,15,331	0/0:36,0:36:66.18:0,66,1305	0/0:20,0:20:39.13:0,39,841	1/1:6,0:25:24.81:157,25,0	0/0:31,0:31:51.17:0,51,1027	1/1:5,9:14:15.05:232,15,0	1/1:10,0:24:9.50:188,9,0	1/1:12,13:25:39.13:583,39,0	1/1:8,19:28:51.17:772,51,0	1/1:3,3:6:3.01:46,3,0
chr10	11219828	.	AGACAGCCTGCCCTGCTCACCCGCTGCAGCCTG	A	4241.57	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=0.593;DP=508;FS=0.449;HRun=0;HaplotypeScore=391.0416;InbreedingCoeff=0.9051;MQ=67.43;MQ0=0;MQRankSum=-1.511;QD=23.56;ReadPosRankSum=1.428;VQSLOD=2.2919;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:48.04:0,48,2477	1/1:13,0:13:23.89:265,24,0	0/0:8,0:7:10.73:0,11,56	0/0:11,0:10:0.30:0,0,27	0/0:15,0:15:23.94:0,24,934	0/0:12,0:12:30.05:0,30,2065	0/0:23,0:23:51.11:0,51,2326	0/0:25,0:25:32.90:0,33,582	0/0:21,0:21:22.01:0,22,2282	1/1:10,0:10:18.02:239,18,0	1/1:7,4:11:6.88:52,7,0	0/0:27,0:27:66.21:0,66,5224	0/0:10,0:10:21.05:0,21,1280	0/0:37,0:37:81.20:0,81,4948	1/1:15,0:15:12.03:255,12,0	1/1:16,0:16:41.78:397,42,0	1/1:24,0:24:27.50:425,27,0	1/1:20,0:20:41.91:601,42,0	0/0:12,0:12:11.98:0,12,497	0/0:14,0:14:24.03:0,24,875	0/0:59,0:59:99:0,130,6679	0/0:13,0:13:22.83:0,23,508	1/1:8,0:7:5.98:49,6,0	1/1:26,0:26:52.13:827,52,0	0/0:17,0:17:40.57:0,41,1591	1/1:7,13:18:41.97:547,42,0	1/1:14,0:14:33.01:483,33,0	1/1:3,0:3:6.02:100,6,0
chr10	11220390	.	CTGTG	C	2935.09	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=-2.421;DP=907;FS=2.276;HRun=0;HaplotypeScore=218.0265;InbreedingCoeff=0.8401;MQ=64.06;MQ0=15;MQRankSum=3.338;QD=14.68;ReadPosRankSum=2.293;VQSLOD=3.3386;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:24,19:42:48.16:762,48,0	0/0:9,0:14:11.76:0,12,132	0/0:46,0:26:11.96:0,12,132	0/0:51,0:27:12.03:0,12,190	1/1:16,16:34:32.56:595,33,0	1/1:8,6:14:23.41:362,23,0	1/1:14,11:25:36.12:569,36,0	0/0:35,0:34:27.87:0,28,351	1/1:12,15:28:33.10:506,33,0	0/0:33,0:35:49.29:0,49,708	0/0:17,0:17:6.47:0,6,60	0/0:33,0:33:6.95:0,7,118	0/0:41,0:41:22.17:0,22,338	0/0:26,0:25:14.42:0,14,136	0/0:34,0:37:27.46:0,27,286	0/0:34,0:42:23.97:0,24,512	0/1:14,0:35:23.14:23,0,37	0/0:14,0:14:17.75:0,18,223	0/0:28,0:28:34.32:0,34,556	0/0:26,0:34:54.12:0,54,829	0/0:73,0:84:99:0,118,2103	0/0:32,0:31:24.47:0,24,266	0/0:19,0:21:20.80:0,21,283	0/0:31,0:31:28.42:0,28,443	1/1:15,6:21:21.06:307,21,0	0/0:37,0:37:66.57:0,67,994	0/0:14,0:29:31.31:0,31,444	0/0:9,0:9:15.57:0,16,120
chr10	11220454	.	ATG	A	3728.21	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=6.536;DP=879;FS=3.536;HRun=0;HaplotypeScore=188.7222;InbreedingCoeff=0.9958;MQ=56.67;MQ0=27;MQRankSum=0.643;QD=23.30;ReadPosRankSum=0.043;VQSLOD=3.7662;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:63.21:0,63,1026	0/0:16,0:15:23.97:0,24,377	0/0:78,0:21:39.12:0,39,573	0/0:94,0:36:32.10:0,32,486	0/0:13,0:28:47.86:0,48,458	0/0:20,0:20:27.05:0,27,444	0/0:34,0:34:78.27:0,78,1279	1/1:11,26:36:74.80:907,75,0	0/0:32,0:32:66.39:0,66,1160	0/0:32,0:32:69.21:0,69,1055	0/0:17,0:17:36.12:0,36,581	0/0:24,1:25:20.07:0,20,817	0/0:19,0:19:48.16:0,48,786	0/0:25,0:25:54.18:0,54,868	0/0:24,1:25:29.02:0,29,991	0/0:27,0:27:57.19:0,57,928	0/0:26,0:26:44.20:0,44,733	0/0:11,0:11:24.08:0,24,382	1/1:8,12:20:33.07:373,33,0	1/1:6,10:16:30.09:371,30,0	1/1:19,68:86:99:2078,169,0	0/0:23,1:23:23:0,23,882	0/0:21,0:21:48.06:0,48,787	0/0:30,0:30:60.20:0,60,947	0/0:8,0:28:66.04:0,66,623	0/0:30,0:30:81.75:0,82,1308	0/0:18,0:18:32.61:0,33,520	0/0:21,0:21:59.87:0,60,914
chr10	11220520	.	CTGTGTG	C	1765.29	PASS	AB=0.940;AC=25;AF=0.481;AN=52;BaseQRankSum=1.350;DP=996;FS=22.590;HRun=0;HaplotypeScore=235.4794;InbreedingCoeff=0.3120;MQ=46.48;MQ0=53;MQRankSum=-2.273;QD=4.05;ReadPosRankSum=0.461;VQSLOD=1.2376;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:37:44.72:0,45,919	1/1:8,0:8:8.05:80,8,0	./.	./.	0/0:19,0:35:2.81:0,3,14	0/0:18,0:17:16.21:0,16,431	0/0:53,0:53:21.47:0,21,386	0/0:39,0:37:12.04:0,12,161	0/0:37,0:35:28.01:0,28,683	0/1:39,3:43:99:390,0,101	0/0:26,0:26:0:0,0,0	1/1:27,10:37:9.44:142,9,0	1/1:26,1:27:14.82:200,15,0	1/1:23,1:24:0.15:0,0,0	1/1:16,9:25:3.01:61,3,0	1/1:19,13:31:3.35:62,3,0	0/1:28,1:29:43.84:66,0,44	0/1:15,0:15:72.67:73,0,82	0/1:21,0:18:4.88:5,0,18	0/0:24,0:26:6.81:0,7,79	0/0:85,0:76:37.51:0,38,435	0/0:21,8:28:0.43:0,0,1	0/1:27,6:33:0.01:0,0,0	1/1:38,2:40:8.16:48,8,0	1/1:18,0:23:6:65,6,0	0/1:35,0:34:74.88:387,0,75	1/1:20,0:20:21.95:259,22,0	0/1:19,2:21:35.75:87,0,36
chr10	11221644	.	A	AAC	2066.40	PASS	AB=0.837;AC=31;AF=0.620;AN=50;BaseQRankSum=-3.173;DP=500;FS=0.000;HRun=0;HaplotypeScore=97.4161;InbreedingCoeff=0.0580;MQ=56.13;MQ0=12;MQRankSum=1.897;QD=5.58;ReadPosRankSum=-0.464;VQSLOD=2.5288;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:26:32.71:306,33,0	1/1:6,4:10:9.03:133,9,0	./.	./.	0/0:12,0:15:11.69:0,12,93	1/1:16,0:15:6.88:53,7,0	1/1:30,0:30:5.57:67,6,0	./.	1/1:14,0:15:10.54:79,11,0	0/1:12,0:12:13.07:40,0,13	0/1:7,4:12:9.03:119,0,9	0/0:15,0:18:2.13:0,2,33	0/1:4,0:12:1.90:2,0,42	0/0:7,0:11:2.84:0,3,14	0/1:21,4:26:33.59:190,0,34	0/1:8,7:17:35.47:35,0,37	0/1:34,3:39:25.56:378,0,26	0/1:11,3:15:0.21:152,0,0	1/1:13,0:13:6.01:69,6,0	1/1:4,11:15:3.01:44,3,0	1/1:14,1:14:2.06:42,2,0	0/0:14,0:16:2.84:0,3,14	1/1:6,5:13:6.49:89,6,0	0/1:12,7:20:23.27:80,0,23	0/0:7,0:9:8.84:0,9,71	1/1:27,1:28:12.47:127,12,0	0/1:20,5:25:12.26:185,0,12	1/1:7,0:7:3:25,3,0
chr10	11224179	.	A	AG	16742.70	PASS	AB=0.829;AC=54;AF=0.964;AN=56;BaseQRankSum=1.777;DP=531;FS=0.000;HRun=0;HaplotypeScore=204.8073;InbreedingCoeff=-0.0349;MQ=54.65;MQ0=2;MQRankSum=-3.794;QD=31.53;ReadPosRankSum=1.175;VQSLOD=4.0117;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,42:41:96.28:1155,96,0	1/1:0,8:8:24.07:300,24,0	0/1:5,0:6:29.44:36,0,29	0/1:6,2:8:9.22:115,0,9	1/1:2,16:18:39.10:458,39,0	1/1:0,22:22:54.16:653,54,0	1/1:3,17:20:60.17:724,60,0	1/1:0,19:19:57.19:781,57,0	1/1:0,18:17:47.72:555,48,0	1/1:0,21:21:59:785,59,0	1/1:10,11:20:27.08:359,27,0	1/1:0,30:30:81.20:946,81,0	1/1:1,21:22:63.20:794,63,0	1/1:1,12:13:36.11:435,36,0	1/1:4,16:20:57.16:694,57,0	1/1:2,18:20:60.18:743,60,0	1/1:0,22:22:42.03:520,42,0	1/1:0,13:13:27.09:370,27,0	1/1:0,22:23:69.22:938,69,0	1/1:3,16:19:48.14:587,48,0	1/1:0,19:19:36.10:422,36,0	1/1:0,18:17:42.05:474,42,0	1/1:4,8:12:32.67:415,33,0	1/1:0,14:14:33.08:363,33,0	1/1:5,19:24:69.20:852,69,0	1/1:0,20:21:60.19:810,60,0	1/1:0,29:29:87.16:1099,87,0	1/1:1,8:9:27.09:361,27,0
chr10	11224182	.	TTG	T	15247.48	PASS	AB=0.857;AC=53;AF=0.946;AN=56;BaseQRankSum=1.399;DP=508;FS=9.064;HRun=0;HaplotypeScore=214.9536;InbreedingCoeff=0.3591;MQ=51.25;MQ0=2;MQRankSum=-3.405;QD=30.37;ReadPosRankSum=0.575;VQSLOD=5.2457;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,35:39:91.84:1194,92,0	1/1:0,8:8:24.08:317,24,0	0/0:6,0:6:0.17:0,0,7	0/1:5,1:6:26.59:30,0,27	1/1:2,16:18:39.06:461,39,0	1/1:4,17:21:53.19:628,53,0	1/1:3,17:20:51.08:625,51,0	1/1:2,16:18:49.68:600,50,0	1/1:0,18:17:46.91:526,47,0	1/1:7,14:21:55.90:586,56,0	1/1:13,8:20:21:248,21,0	1/1:3,26:29:78.82:939,79,0	1/1:1,21:22:63.15:764,63,0	1/1:0,12:12:33.10:398,33,0	1/1:3,16:19:49.54:579,50,0	1/1:1,18:19:57.18:722,57,0	1/1:3,16:19:41.13:476,41,0	1/1:1,10:11:24.08:328,24,0	1/1:5,17:22:65.12:724,65,0	1/1:3,16:19:44.27:575,44,0	1/1:5,13:18:37.80:422,38,0	1/1:3,13:15:39.08:475,39,0	1/1:5,8:13:30.05:414,30,0	1/1:2,11:13:33.10:385,33,0	1/1:3,19:22:60.15:765,60,0	1/1:3,17:20:53.99:700,54,0	1/1:0,28:28:84.21:1038,84,0	1/1:1,8:9:24.06:328,24,0
chr10	11224183	.	TG	T	10959.57	PASS	AB=0.929;AC=54;AF=0.964;AN=56;BaseQRankSum=1.726;DP=506;FS=3.013;HRun=6;HaplotypeScore=223.5354;InbreedingCoeff=0.1561;MQ=51.27;MQ0=2;MQRankSum=-2.417;QD=21.66;ReadPosRankSum=0.701;VQSLOD=1.9957;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:39,0:38:89.89:849,90,0	1/1:8,0:8:24.03:235,24,0	0/1:6,0:6:5.87:6,0,7	0/1:5,1:6:6.78:34,0,7	1/1:19,0:19:33.02:313,33,0	1/1:20,0:20:51.09:514,51,0	1/1:18,0:18:51.10:511,51,0	1/1:18,0:18:41.77:379,42,0	1/1:18,0:17:42.08:427,42,0	1/1:20,0:20:36.04:357,36,0	1/1:13,8:20:14.97:135,15,0	1/1:29,0:29:69.10:679,69,0	1/1:22,0:22:56.46:552,56,0	1/1:12,0:12:33.07:337,33,0	1/1:19,0:19:41.28:398,41,0	1/1:20,0:20:60.08:597,60,0	1/1:19,0:19:35.68:369,36,0	1/1:11,0:11:24.05:243,24,0	1/1:22,0:22:41.96:396,42,0	1/1:19,0:19:42.04:405,42,0	1/1:18,0:18:32.95:305,33,0	1/1:16,0:15:38.97:366,39,0	1/1:14,0:14:26.20:217,26,0	1/1:13,0:13:33.05:328,33,0	1/1:22,0:22:57.01:536,57,0	1/1:20,0:20:50.77:460,51,0	1/1:28,0:28:81.08:779,81,0	1/1:9,0:9:24.02:230,24,0
chr10	11225273	.	T	TTCTTCAGAATCTTTATTGACC	30393	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=7.046;DP=615;FS=2.650;HRun=0;HaplotypeScore=318.7438;InbreedingCoeff=0.9967;MQ=82.61;MQ0=0;MQRankSum=-17.082;QD=206.76;ReadPosRankSum=1.837;VQSLOD=4.4263;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:26,2:29:81.28:5700,81,0	0/0:6,0:6:15.05:0,15,692	0/0:19,0:19:48.11:0,48,1796	0/0:30,0:29:60.40:0,60,2271	1/1:20,2:23:45.63:3325,46,0	1/1:13,3:17:42.14:3604,42,0	1/1:23,4:29:81.28:6472,81,0	0/0:52,0:52:99:0,141,6269	1/1:16,8:26:69.24:5632,69,0	0/0:20,0:20:60.21:0,60,3149	0/0:21,0:21:57.20:0,57,3008	0/0:13,0:13:39.13:0,39,2120	0/0:22,0:22:66.21:0,66,2970	0/0:23,0:23:66.23:0,66,3630	0/0:24,0:24:69.22:0,69,3478	0/0:12,0:12:33.11:0,33,1796	0/0:25,0:25:69.20:0,69,3422	0/0:20,0:20:54.19:0,54,2846	0/0:18,0:18:54.18:0,54,2491	0/0:13,0:13:33.10:0,33,1631	0/0:18,0:18:51.15:0,51,2130	0/0:18,0:18:54.17:0,54,2529	0/0:24,0:24:68.90:0,69,3752	0/0:22,0:22:63.20:0,63,3141	1/1:17,6:23:66.23:5660,66,0	0/0:24,0:24:72.22:0,72,3492	0/0:29,0:29:81.28:0,81,4050	0/0:15,0:15:42.06:0,42,1260
chr10	11226403	.	GTTTTTTGT	G	433.27	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=0.200;DP=516;FS=12.294;HRun=0;HaplotypeScore=127.1583;InbreedingCoeff=0.8545;MQ=67.95;MQ0=26;MQRankSum=0.399;QD=16.05;ReadPosRankSum=0.006;VQSLOD=2.2747;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:55.86:0,56,774	0/0:7,0:7:20.97:0,21,227	0/0:44,0:15:16.41:0,16,184	0/0:30,0:15:16.65:0,17,248	1/1:14,2:16:31.09:393,31,0	0/0:27,0:26:56.96:0,57,814	0/0:11,0:11:22.13:0,22,173	0/0:34,0:33:71.59:0,72,1222	0/0:15,0:14:32.93:0,33,381	0/0:23,0:23:54.61:0,55,711	0/0:24,0:24:53.78:0,54,676	0/0:17,0:17:45.48:0,45,766	0/0:19,0:16:41.77:0,42,818	0/0:18,0:16:35.52:0,36,534	0/0:12,0:10:21.24:0,21,261	0/0:16,0:15:38.71:0,39,538	0/0:22,0:21:45.56:0,46,569	0/0:19,0:17:35.60:0,36,457	0/0:21,0:17:38.94:0,39,799	0/0:15,0:15:41.99:0,42,987	0/0:11,0:9:17.88:0,18,341	0/0:19,0:19:38.96:0,39,838	0/0:8,0:8:23.84:0,24,242	0/0:11,0:10:9.01:0,9,139	1/1:1,10:10:6.02:152,6,0	0/0:23,0:22:47.57:0,48,613	0/0:8,0:8:12.89:0,13,127	0/0:4,0:4:8.99:0,9,121
chr10	11226653	.	A	AC	14579.37	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-15.712;DP=664;FS=22.462;HRun=4;HaplotypeScore=73.6041;InbreedingCoeff=0.9809;MQ=75.41;MQ0=0;MQRankSum=0.626;QD=34.88;ReadPosRankSum=2.073;VQSLOD=2.9654;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,40:43:99:1517,111,0	1/1:0,3:3:6.02:78,6,0	0/0:14,0:14:26.74:0,27,318	0/0:21,0:21:42.46:0,42,429	1/1:1,21:22:51.17:696,51,0	1/1:1,26:27:72.24:975,72,0	1/1:2,41:43:99:1435,105,0	0/0:23,0:23:57.14:0,57,630	1/1:1,32:33:93.31:1270,93,0	1/1:1,11:13:27.08:355,27,0	1/1:1,11:12:33.11:444,33,0	0/0:23,0:23:63.18:0,63,713	0/0:34,0:34:84.24:0,84,950	0/0:32,0:32:84.24:0,84,952	1/1:2,25:27:69.23:943,69,0	1/1:0,18:18:51.17:697,51,0	1/1:1,37:37:99:1436,105,0	1/1:0,24:24:60.20:821,60,0	0/0:19,0:19:48.12:0,48,536	0/0:12,0:12:33.09:0,33,374	0/0:54,0:54:99:0,162,1838	0/0:13,0:13:36.10:0,36,408	1/1:0,8:8:21.07:287,21,0	1/1:3,41:43:99:1429,105,0	1/1:1,10:11:24.08:327,24,0	1/1:0,25:25:72.24:983,72,0	1/1:2,19:21:51.16:681,51,0	1/1:1,5:6:15.05:205,15,0
chr10	11237953	.	CT	C	1998.84	PASS	AB=0.613;AC=45;AF=0.804;AN=56;BaseQRankSum=-1.754;DP=348;FS=6.821;HRun=13;HaplotypeScore=57.1188;InbreedingCoeff=0.4881;MQ=79.13;MQ0=1;MQRankSum=-1.765;QD=7.04;ReadPosRankSum=5.577;VQSLOD=1.9280;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,1:24:41.68:134,42,0	1/1:3,5:8:11.59:87,12,0	0/0:17,1:15:14.46:0,14,176	0/0:12,2:13:3.78:0,4,136	0/0:11,0:22:51.53:0,52,304	1/1:0,0:9:14.26:41,14,0	1/1:2,0:20:36.18:104,36,0	1/1:6,0:16:18.78:54,19,0	0/1:3,0:14:3.15:26,0,3	1/1:5,8:14:25.85:181,26,0	1/1:4,9:13:0.53:167,1,0	1/1:4,0:13:16.27:47,16,0	1/1:3,0:10:14.22:41,14,0	1/1:4,1:9:8.98:39,9,0	1/1:3,11:15:3.57:176,4,0	1/1:2,8:10:20.87:153,21,0	0/1:6,8:14:2.38:148,0,2	1/1:2,9:11:19.91:137,20,0	1/1:7,0:14:6:39,6,0	1/1:1,0:8:12.21:36,12,0	1/1:0,0:21:30.56:90,31,0	1/1:0,0:2:4.07:12,4,0	0/1:4,5:9:15:59,0,15	1/1:4,4:8:8.05:82,8,0	0/0:4,0:10:25.95:0,26,149	1/1:1,5:7:10.95:71,11,0	1/1:4,9:13:3.63:190,4,0	1/1:0,2:2:5.97:44,6,0
chr10	11238366	.	CGAGGGAGGAGAGA	C	17236.62	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=8.682;DP=535;FS=2.602;HRun=0;HaplotypeScore=200.9332;InbreedingCoeff=0.8012;MQ=76.37;MQ0=1;MQRankSum=-10.174;QD=41.14;ReadPosRankSum=5.453;VQSLOD=4.4588;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:21,17:38:15.05:494,15,0	1/1:5,3:8:9.03:336,9,0	0/0:25,0:21:34.10:0,34,1308	0/0:50,0:39:59.26:0,59,1711	0/0:26,0:26:60.21:0,60,3337	1/1:7,7:14:18.06:672,18,0	1/1:12,3:15:12.04:424,12,0	1/1:20,0:20:3.01:77,3,0	1/1:7,15:22:39.13:1452,39,0	1/1:7,14:21:42.10:1255,42,0	1/1:8,4:12:15.05:560,15,0	1/1:7,8:15:18.06:672,18,0	1/1:3,8:11:18.06:672,18,0	1/1:8,11:19:30.10:1110,30,0	1/1:3,13:16:39.13:1447,39,0	1/1:5,10:15:21.07:784,21,0	1/1:18,8:26:9.03:336,9,0	1/1:9,7:16:12.04:448,12,0	1/1:9,5:14:15.05:560,15,0	1/1:9,12:21:39.13:1430,39,0	1/1:10,7:17:3.01:112,3,0	1/1:3,12:15:24.07:855,24,0	1/1:3,10:13:24.08:896,24,0	1/1:14,13:26:12.51:448,13,0	0/0:15,0:15:33.09:0,33,1713	1/1:7,17:24:48.12:1564,48,0	1/1:8,7:15:15.05:520,15,0	1/1:4,1:5:3.01:112,3,0
chr10	11238389	.	GAGAGA	G	3999.51	PASS	AB=0.977;AC=26;AF=0.464;AN=56;BaseQRankSum=15.610;DP=481;FS=2.762;HRun=0;HaplotypeScore=161.2841;InbreedingCoeff=-0.4599;MQ=67.07;MQ0=1;MQRankSum=-13.949;QD=12.08;ReadPosRankSum=13.841;VQSLOD=0.1486;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:28,1:29:53.34:53,0,1023	0/1:4,1:5:68:86,0,68	0/0:34,0:27:69.84:0,70,1913	0/0:50,0:36:94.22:0,94,2231	0/0:34,0:34:99:0,102,3197	0/1:10,0:10:99:162,0,245	0/1:6,1:7:85.84:86,0,153	0/0:19,0:19:27.16:0,27,1555	1/1:16,0:16:39.09:406,39,0	0/1:21,0:21:99:299,0,640	1/1:5,1:6:15.04:158,15,0	0/1:14,0:14:99:153,0,548	0/1:12,0:12:99:159,0,368	0/1:16,0:16:99:261,0,439	0/1:17,0:17:99:350,0,330	0/1:12,0:13:99:193,0,171	0/1:18,0:18:55.66:56,0,906	0/1:11,0:11:99:102,0,373	0/1:14,0:14:99:115,0,806	0/1:16,1:17:99:342,0,209	0/1:22,0:22:10.43:10,0,547	0/1:14,0:14:99:191,0,163	0/1:13,0:13:99:222,0,168	0/1:21,0:21:99:103,0,372	0/0:13,0:13:36.10:0,36,1112	0/1:20,0:20:99:371,0,394	0/1:14,0:13:90.46:90,0,639	1/1:1,0:1:3.01:31,3,0
chr10	11238666	.	AG	A	4648.74	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=11.175;DP=691;FS=11.181;HRun=3;HaplotypeScore=71.2566;InbreedingCoeff=0.9913;MQ=84.62;MQ0=0;MQRankSum=-1.488;QD=35.22;ReadPosRankSum=-1.214;VQSLOD=4.2037;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,117,1657	0/0:4,0:4:12.04:0,12,173	0/0:21,0:21:60.09:0,60,767	0/0:21,0:21:33.81:0,34,546	0/0:27,0:27:75.25:0,75,1077	0/0:16,0:16:48.16:0,48,690	0/0:33,0:33:99:0,99,1424	1/1:1,37:38:99:1351,111,0	0/0:31,0:31:93.30:0,93,1321	0/0:17,0:17:51.15:0,51,700	0/0:16,0:16:48.08:0,48,643	0/0:36,0:36:99:0,105,1512	0/0:15,0:15:45.15:0,45,648	0/0:28,0:28:84.27:0,84,1189	0/0:19,0:19:54.18:0,54,778	0/0:17,0:17:45.14:0,45,630	0/0:32,0:32:90.30:0,90,1295	0/0:30,0:30:87.28:0,87,1235	1/1:0,17:17:51.15:620,51,0	1/1:0,20:20:51.16:632,51,0	1/1:0,57:57:99:2046,166,0	0/0:19,0:19:54.18:0,54,777	0/0:12,0:12:33.10:0,33,455	0/0:28,0:28:84.28:0,84,1206	0/0:27,0:27:81.26:0,81,1149	0/0:35,0:34:99:0,105,1495	0/0:21,0:21:60.20:0,60,864	0/0:12,0:12:36.12:0,36,518
chr10	11238831	.	CT	C	461.62	PASS	AB=0.791;AC=9;AF=0.161;AN=56;BaseQRankSum=5.167;DP=533;FS=6.199;HRun=14;HaplotypeScore=67.0039;InbreedingCoeff=0.4968;MQ=67.75;MQ0=3;MQRankSum=2.040;QD=4.01;ReadPosRankSum=-0.456;VQSLOD=0.8397;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,1:34:53.40:0,53,619	0/0:11,1:12:1.88:0,2,192	0/0:17,1:9:7.01:0,7,39	0/0:20,0:14:13.34:0,13,78	0/0:24,6:30:7.68:0,8,333	0/0:18,2:21:9.34:0,9,229	0/0:17,3:20:18.39:0,18,293	1/1:14,13:29:28.02:202,28,0	0/0:19,1:20:18.45:0,18,310	0/0:19,1:20:9.43:0,9,224	0/1:15,3:18:2.09:2,0,264	0/0:19,0:19:12.42:0,12,240	0/0:9,0:9:15.01:0,15,136	0/0:15,0:16:20.94:0,21,177	0/0:12,1:13:24.47:0,24,215	0/0:12,1:13:5.40:0,5,173	0/0:26,0:26:53.96:0,54,472	0/0:22,2:23:24.44:0,24,363	1/1:11,10:21:6.03:166,6,0	0/1:6,5:12:5.03:106,0,5	1/1:13,4:17:17.66:117,18,0	0/0:15,0:15:11:0,11,219	0/0:18,2:20:6.45:0,6,198	0/0:21,2:24:12.74:0,13,382	0/1:14,3:17:11.80:12,0,164	0/0:19,0:19:32.93:0,33,283	0/0:19,0:20:23.15:0,23,230	0/0:5,0:5:12:0,12,108
chr10	11238925	.	C	CTG	13412.04	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-17.691;DP=587;FS=2.187;HRun=0;HaplotypeScore=61.7270;InbreedingCoeff=0.9998;MQ=76.80;MQ0=0;MQRankSum=-1.628;QD=47.90;ReadPosRankSum=-0.291;VQSLOD=5.4287;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,31:31:87.30:1594,87,0	0/0:11,0:11:33.10:0,33,455	0/0:19,0:19:45.13:0,45,622	0/0:13,0:13:33.06:0,33,443	0/0:31,0:31:87.27:0,87,1209	1/1:0,23:23:69.24:1264,69,0	1/1:2,18:21:48.16:880,48,0	1/1:1,29:31:84.25:1427,84,0	1/1:1,19:20:54.05:949,54,0	0/0:26,0:26:72.24:0,72,1018	0/0:11,0:11:33.11:0,33,473	1/1:1,23:26:66.12:1210,66,0	1/1:0,13:13:36.12:660,36,0	1/1:2,19:21:51.17:935,51,0	0/0:24,0:24:72.24:0,72,1031	0/0:15,0:15:45.15:0,45,644	0/0:20,0:20:57.16:0,57,793	0/0:22,0:22:60.20:0,60,859	1/1:1,19:21:60.17:1036,60,0	1/1:4,30:34:84.29:1538,84,0	1/1:0,14:15:42.14:770,42,0	1/1:3,21:24:63.22:1150,63,0	0/0:22,0:22:60.20:0,60,859	0/0:21,0:21:63.20:0,63,884	0/0:22,0:22:63.20:0,63,885	0/0:25,0:25:75.24:0,75,1058	0/0:13,0:13:36.12:0,36,516	0/0:12,0:12:36.12:0,36,516
chr10	11239522	.	T	TG	11768.91	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-13.608;DP=627;FS=1.520;HRun=8;HaplotypeScore=60.2341;InbreedingCoeff=0.9351;MQ=76.78;MQ0=0;MQRankSum=-2.537;QD=26.69;ReadPosRankSum=1.083;VQSLOD=5.5758;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,105,955	1/1:0,5:5:9.03:104,9,0	0/0:15,0:15:32.91:0,33,284	0/0:24,0:24:50.70:0,51,431	0/0:17,0:17:42.01:0,42,384	0/0:13,0:13:33.02:0,33,302	0/0:33,0:34:92.08:0,92,830	1/1:6,11:17:30.09:345,30,0	0/0:29,0:29:78.03:0,78,714	1/1:0,16:16:48.14:554,48,0	1/1:0,5:5:15.04:173,15,0	1/1:3,32:35:90.27:1038,90,0	1/1:6,17:23:23.69:527,24,0	1/1:3,28:31:81.23:926,81,0	1/1:3,15:18:39.12:450,39,0	1/1:2,32:34:90.27:1039,90,0	1/1:6,23:29:23.06:713,23,0	1/1:5,32:38:56.61:887,57,0	1/1:4,15:19:45.13:519,45,0	1/1:2,8:10:12.48:261,12,0	1/1:10,67:77:99:2147,187,0	1/1:4,9:13:2.62:284,3,0	1/1:4,11:15:33.10:381,33,0	1/1:6,19:25:54.16:623,54,0	0/0:14,0:14:42:0,42,378	1/1:4,9:12:27.02:285,27,0	1/1:2,12:14:39.11:447,39,0	1/1:2,2:4:6.02:69,6,0
chr10	11240053	.	TA	T	1948.94	PASS	AB=0.593;AC=25;AF=0.446;AN=56;BaseQRankSum=-8.427;DP=458;FS=6.253;HRun=8;HaplotypeScore=97.9246;InbreedingCoeff=-0.0345;MQ=64.81;MQ0=0;MQRankSum=-0.165;QD=6.25;ReadPosRankSum=-1.336;VQSLOD=0.6762;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,10:11:2.99:78,3,0	0/1:3,6:9:12.18:20,0,12	0/0:15,0:15:36.09:0,36,412	0/0:18,1:19:32.99:0,33,370	0/0:6,11:17:2.84:0,3,13	0/1:5,18:23:10.41:21,0,10	0/1:6,13:19:16.22:16,0,21	1/1:8,18:26:31.01:490,31,0	0/1:1,9:10:3.04:23,0,3	0/1:13,11:24:32.89:267,0,33	0/0:8,11:19:7.67:0,8,25	0/1:4,20:24:9.14:21,0,9	0/1:4,12:16:12.96:35,0,13	0/1:4,6:10:16.21:16,0,21	0/1:5,15:20:13.46:13,0,29	0/0:5,19:24:5.09:0,5,19	1/1:3,6:9:9:87,9,0	1/1:1,5:6:6:58,6,0	1/1:7,12:19:32.68:341,33,0	0/1:5,13:18:19.59:41,0,20	0/0:3,9:12:0:0,0,0	0/0:3,11:14:1.46:0,1,7	0/0:5,10:15:7.43:0,7,25	0/0:3,7:10:0:0,0,0	0/1:6,17:23:17.76:92,0,18	1/1:9,17:26:24.53:422,25,0	0/1:6,11:17:19.88:42,0,20	0/1:1,1:2:4.08:23,0,4
chr10	11240852	.	GC	G	137.99	PASS	AC=4;AF=0.67;AN=6;BaseQRankSum=-0.736;DP=8;FS=7.782;HRun=1;HaplotypeScore=13.2918;MQ=93.07;MQ0=0;MQRankSum=-0.736;QD=23.00;ReadPosRankSum=0.736;VQSLOD=2.8697;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	0/0:1,0:1:2.99:0,3,23	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	1/1:0,4:4:9.03:125,9,0	./.	./.	1/1:0,2:2:6.02:83,6,0	./.	./.	./.	./.	./.
chr10	11240922	.	T	TG	706.22	PASS	AC=36;AF=1.000;AN=36;DP=69;FS=0.000;HRun=0;HaplotypeScore=102.2817;InbreedingCoeff=0.0459;MQ=28.72;MQ0=0;QD=10.39;VQSLOD=3.9370;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,1:1:2.80:13,3,0	1/1:0,4:4:11.16:52,11,0	./.	./.	1/1:0,4:4:2.53:10,3,0	1/1:0,5:5:13.72:60,14,0	1/1:0,1:1:2.68:11,3,0	./.	./.	1/1:0,7:7:17.75:120,18,0	1/1:0,6:6:9.76:37,10,0	./.	1/1:0,1:1:2.80:13,3,0	1/1:0,1:1:2.74:12,3,0	1/1:0,2:2:5.27:21,5,0	1/1:0,3:3:8.23:36,8,0	./.	./.	./.	1/1:0,8:8:21.92:96,22,0	./.	1/1:0,6:6:15.71:62,16,0	1/1:0,6:6:15.36:58,15,0	./.	1/1:0,7:7:19.21:84,19,0	1/1:0,1:1:2.92:17,3,0	1/1:0,3:3:8.46:42,8,0	1/1:0,2:2:5.90:37,6,0
chr10	11240924	.	GA	G	338.17	PASS	AC=36;AF=1.000;AN=36;DP=69;FS=0.000;HRun=1;HaplotypeScore=104.2210;InbreedingCoeff=0.2179;MQ=28.72;MQ0=0;QD=4.97;VQSLOD=0.2019;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,1:1:2.22:7,2,0	1/1:0,4:4:8.79:28,9,0	./.	./.	1/1:0,4:4:1.04:3,1,0	1/1:0,5:5:10.19:30,10,0	1/1:0,1:1:1.82:5,2,0	./.	./.	1/1:0,7:7:16.85:84,17,0	1/1:0,6:6:5.29:13,5,0	./.	1/1:0,1:1:2.22:7,2,0	1/1:0,1:1:2.04:6,2,0	1/1:0,2:2:3.37:9,3,0	1/1:0,3:3:6.11:18,6,0	./.	./.	./.	1/1:0,8:8:16.18:49,16,0	./.	1/1:0,6:6:9.76:26,10,0	1/1:0,6:6:8.66:22,9,0	./.	1/1:0,7:7:14.26:42,14,0	1/1:0,1:1:2.68:11,3,0	1/1:0,3:3:6.91:24,7,0	1/1:0,2:2:5.54:25,6,0
chr10	11241703	.	AAAC	A	13597.38	PASS	AB=0.621;AC=47;AF=0.839;AN=56;BaseQRankSum=6.734;DP=789;FS=2.173;HRun=0;HaplotypeScore=136.1400;InbreedingCoeff=0.8486;MQ=62.21;MQ0=3;MQRankSum=-3.031;QD=20.14;ReadPosRankSum=2.447;VQSLOD=4.9174;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,36:45:78.26:1087,78,0	1/1:4,9:13:27.09:376,27,0	0/0:33,0:24:36.07:0,36,572	0/0:22,0:18:21.07:0,21,347	0/0:31,0:31:66.23:0,66,1281	1/1:6,17:23:42.14:585,42,0	1/1:7,16:23:12.40:281,12,0	0/1:14,0:36:11.05:131,0,11	1/1:6,25:31:60.20:836,60,0	1/1:7,28:35:87.27:1189,87,0	1/1:13,9:22:30.10:412,30,0	1/1:8,0:32:53.38:371,53,0	1/1:7,0:30:47.53:335,48,0	1/1:10,0:27:35.71:251,36,0	1/1:9,31:40:75.25:1045,75,0	1/1:8,31:39:75.17:1045,75,0	1/1:3,20:23:7.88:665,8,0	1/1:4,20:24:48.09:641,48,0	1/1:15,0:32:26.72:260,27,0	1/1:4,0:25:29.55:267,30,0	1/1:8,0:26:17.52:113,18,0	1/1:7,0:21:34.56:239,35,0	1/1:6,18:24:41.86:585,42,0	1/1:11,21:32:60.20:836,60,0	0/0:27,0:27:63.22:0,63,1249	1/1:8,23:31:66.16:849,66,0	1/1:9,24:33:63.20:862,63,0	1/1:0,8:8:24.08:335,24,0
chr10	11241928	.	AAGAC	A	3172.32	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=11.837;DP=784;FS=4.344;HRun=0;HaplotypeScore=120.7138;InbreedingCoeff=0.9953;MQ=59.85;MQ0=0;MQRankSum=-1.456;QD=29.37;ReadPosRankSum=1.718;VQSLOD=3.6210;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,99,2300	0/0:11,0:11:15.05:0,15,370	0/0:27,0:22:33.04:0,33,609	0/0:21,0:18:29.51:0,30,598	0/0:28,0:28:66.23:0,66,1624	0/0:18,0:18:48.16:0,48,1171	0/0:24,0:24:63.20:0,63,1434	0/0:44,0:44:78.24:0,78,1743	0/0:24,0:24:63.13:0,63,1398	0/0:43,0:43:99:0,111,2508	0/0:26,0:26:66.20:0,66,1517	1/1:7,27:34:63.22:1047,63,0	1/1:4,20:24:51.17:849,51,0	1/1:1,20:21:36.12:599,36,0	0/0:40,0:40:96.31:0,96,2261	0/0:40,0:40:90.31:0,90,2171	0/0:24,0:24:57.17:0,57,1263	0/0:28,0:28:75.21:0,75,1715	0/0:20,0:20:45.13:0,45,981	0/0:36,0:36:75.26:0,75,1787	0/0:20,0:20:54.14:0,54,1224	1/1:11,18:29:54.10:837,54,0	0/0:24,0:24:63.20:0,63,1504	0/0:29,0:29:69.19:0,69,1520	0/0:16,0:15:48.16:0,48,1162	0/0:37,0:37:93.31:0,93,2144	0/0:33,0:31:99:0,99,2239	0/0:23,0:23:66.23:0,66,1627
chr10	11242314	.	GTT	G	6284.30	PASS	AB=0.732;AC=43;AF=0.768;AN=56;BaseQRankSum=0.906;DP=563;FS=0.423;HRun=15;HaplotypeScore=77.5058;InbreedingCoeff=0.6127;MQ=73.76;MQ0=0;MQRankSum=1.846;QD=14.32;ReadPosRankSum=7.829;VQSLOD=3.7002;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:7,15:22:10.54:250,0,11	1/1:1,6:8:20.74:170,21,0	0/1:17,0:8:1.06:1,0,20	0/0:25,0:19:24:0,24,206	1/1:12,17:30:8.40:393,8,0	1/1:2,12:15:0.18:229,0,0	1/1:4,5:10:5.77:97,6,0	0/0:23,0:26:47.51:0,48,482	1/1:5,9:15:20.79:228,21,0	1/1:9,14:26:36.25:369,36,0	1/1:7,14:22:2.17:301,2,0	1/1:4,9:13:7.08:214,7,0	1/1:3,13:18:29.52:294,30,0	1/1:7,6:13:11.91:102,12,0	1/1:6,15:24:55.80:438,56,0	1/1:3,15:20:41.36:340,41,0	1/1:5,13:20:42.64:364,43,0	1/1:2,9:12:14.82:176,15,0	0/0:24,0:27:60.10:0,60,685	0/0:30,0:33:71.02:0,71,795	0/0:9,0:12:14.53:0,15,159	1/1:3,16:19:32.76:290,33,0	1/1:7,14:21:19.21:387,19,0	1/1:6,7:16:23.59:192,24,0	0/1:7,14:21:2.28:300,0,2	1/1:13,21:35:58.56:551,59,0	1/1:9,14:25:5.84:346,6,0	1/1:4,13:17:1.40:253,1,0
chr10	11244493	.	G	GT	121.80	PASS	AC=8;AF=0.148;AN=54;BaseQRankSum=5.519;DP=293;FS=1.342;HRun=0;HaplotypeScore=42.0346;InbreedingCoeff=0.8132;MQ=66.78;MQ0=2;MQRankSum=-4.434;QD=9.37;ReadPosRankSum=2.693;VQSLOD=3.3726;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:72.24:0,72,1002	0/0:4,0:4:12.04:0,12,168	0/0:14,0:12:31.15:0,31,441	0/0:9,0:6:11.91:0,12,162	1/1:0,4:4:4.53:47,5,0	0/0:14,0:14:39.13:0,39,545	0/0:12,0:12:36.08:0,36,482	./.	0/0:12,0:12:33.07:0,33,439	0/0:3,0:3:9.03:0,9,126	0/0:8,0:8:24.08:0,24,335	0/0:15,0:14:39.12:0,39,530	0/0:10,0:10:30.07:0,30,395	0/0:15,0:15:42.14:0,42,587	0/0:14,0:13:39.13:0,39,546	0/0:12,0:12:33.11:0,33,460	0/0:24,0:24:66.17:0,66,885	0/0:17,0:17:51.17:0,51,713	1/1:1,2:3:6:54,6,0	1/1:0,4:4:11.99:102,12,0	0/0:0,3:3:5.03:0,5,23	0/0:5,0:5:15.05:0,15,210	0/0:9,0:9:24.08:0,24,335	0/0:25,0:25:72.24:0,72,1006	1/1:0,2:2:6:52,6,0	0/0:10,0:10:30.10:0,30,420	0/0:12,0:12:36.10:0,36,485	0/0:6,0:6:18.06:0,18,252
chr10	11244494	.	G	GGTTAAGGGC	1261.24	PASS	AC=10;AF=0.185;AN=54;BaseQRankSum=6.144;DP=297;FS=2.770;HRun=0;HaplotypeScore=82.1090;InbreedingCoeff=0.8758;MQ=66.40;MQ0=3;MQRankSum=-6.231;QD=78.83;ReadPosRankSum=1.970;VQSLOD=3.8112;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:72.23:0,72,2157	0/0:4,0:4:12.04:0,12,340	0/0:18,0:13:35.09:0,35,876	0/0:10,0:6:12.04:0,12,298	1/1:0,4:4:9.03:286,9,0	0/0:14,0:14:39.12:0,39,1198	0/0:11,0:11:33.11:0,33,1072	./.	0/0:12,0:12:33.10:0,33,1002	0/0:3,0:3:9.03:0,9,293	0/0:8,0:8:24.08:0,24,722	0/0:15,0:14:42.11:0,42,1094	0/0:10,0:10:30.07:0,30,814	0/0:15,0:15:42.14:0,42,1344	0/0:14,0:13:39.13:0,39,1222	0/0:13,0:13:36.11:0,36,1096	0/0:24,0:24:63.20:0,63,1903	0/0:17,0:17:51.18:0,51,1626	1/1:1,2:3:6.02:256,6,0	1/1:0,4:4:12.04:501,12,0	1/1:0,3:3:8.52:116,9,0	0/0:5,0:5:15.05:0,15,489	0/0:9,0:9:24.08:0,24,730	0/0:25,0:25:75.22:0,75,2298	1/1:0,2:2:6.02:252,6,0	0/0:10,0:10:30.10:0,30,979	0/0:12,0:12:36.12:0,36,1131	0/0:7,0:7:18.06:0,18,563
chr10	11244496	.	C	CCGA	1102.46	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=7.660;DP=318;FS=11.018;HRun=0;HaplotypeScore=56.1232;InbreedingCoeff=0.8947;MQ=63.88;MQ0=5;MQRankSum=-7.444;QD=32.43;ReadPosRankSum=-1.740;VQSLOD=2.1785;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:63.16:0,63,1068	0/0:3,0:3:9.03:0,9,159	0/0:18,0:12:19.27:0,19,471	0/0:10,0:6:12.04:0,12,191	1/1:2,4:6:9.03:188,9,0	0/0:13,0:13:36.12:0,36,635	0/0:12,0:12:33.11:0,33,582	1/1:4,0:4:5.94:41,6,0	0/0:11,0:11:33.11:0,33,574	0/0:3,0:3:9.03:0,9,152	0/0:8,0:8:24.08:0,24,410	0/0:16,0:14:39.11:0,39,624	0/0:9,0:9:27.09:0,27,476	0/0:16,0:16:42.11:0,42,709	0/0:13,0:12:36.12:0,36,635	0/0:13,0:13:36.12:0,36,626	0/0:23,0:23:60.16:0,60,1018	0/0:19,0:19:48.16:0,48,831	1/1:9,2:9:24.08:450,24,0	1/1:1,4:4:12.04:265,12,0	1/1:3,3:6:12.92:194,13,0	0/0:5,0:5:15.05:0,15,265	0/0:9,0:9:24.08:0,24,423	0/0:25,0:25:75.26:0,75,1314	1/1:0,2:2:6.02:134,6,0	0/0:11,0:11:33.10:0,33,555	0/0:15,0:15:36.10:0,36,588	0/0:7,0:7:18.06:0,18,308
chr10	11244637	.	A	AT	1467.63	PASS	AC=6;AF=0.111;AN=54;BaseQRankSum=-7.381;DP=284;FS=12.061;HRun=3;HaplotypeScore=37.1141;InbreedingCoeff=0.6873;MQ=63.26;MQ0=17;MQRankSum=-2.331;QD=26.21;ReadPosRankSum=-4.092;VQSLOD=0.9422;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:19:51.07:0,51,589	0/0:3,0:2:6.02:0,6,72	0/0:8,0:7:19.81:0,20,128	0/0:6,0:4:9.63:0,10,66	0/0:15,0:15:29.73:0,30,232	0/0:18,0:17:44.95:0,45,471	0/0:2,0:2:3.01:0,3,36	1/1:6,33:36:99:1215,100,0	0/0:4,0:4:9.03:0,9,107	0/0:11,0:10:25.41:0,25,278	0/0:7,0:6:15:0,15,162	0/0:5,0:4:9.02:0,9,108	0/0:1,0:1:2.94:0,3,18	0/0:5,0:5:12.04:0,12,142	0/0:4,0:4:9.03:0,9,107	0/0:6,0:6:18.05:0,18,214	0/0:22,0:22:66.16:0,66,769	0/0:20,0:17:36.08:0,36,414	1/1:10,5:13:10.14:296,10,0	./.	1/1:0,2:2:6.02:84,6,0	0/0:4,0:4:8.98:0,9,91	0/0:4,0:4:8.95:0,9,77	0/0:4,0:4:11.25:0,11,114	0/0:18,0:18:43.12:0,43,330	0/0:9,0:8:23.98:0,24,254	0/0:9,0:9:24.03:0,24,261	0/0:22,0:18:51.11:0,51,581
chr10	11244640	.	TA	T	534.08	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=1.113;DP=285;FS=1.631;HRun=11;HaplotypeScore=38.8515;InbreedingCoeff=0.5394;MQ=65.80;MQ0=13;MQRankSum=2.783;QD=15.71;ReadPosRankSum=1.204;VQSLOD=3.8348;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:18:51.09:0,51,531	0/0:2,0:2:6.02:0,6,64	0/0:11,0:9:20.13:0,20,201	0/0:7,0:5:7.63:0,8,57	1/1:1,15:16:35.87:284,36,0	0/0:17,0:17:33.08:0,33,352	0/0:1,0:1:3.01:0,3,32	0/0:39,0:36:87.53:0,88,551	0/0:4,0:4:12.01:0,12,118	0/0:9,0:10:23.91:0,24,231	0/0:5,0:5:12.03:0,12,128	0/0:5,0:4:9.02:0,9,96	0/0:1,0:1:2.98:0,3,21	0/0:6,0:6:15.02:0,15,151	0/0:4,0:4:9.02:0,9,96	0/0:6,0:6:18.04:0,18,190	0/0:24,0:24:69.09:0,69,701	0/0:18,0:15:33.08:0,33,352	0/0:16,0:14:26.56:0,27,180	0/0:1,0:1:2.99:0,3,24	0/0:2,0:2:5.91:0,6,37	0/0:4,0:4:9.02:0,9,96	0/0:3,0:3:5.97:0,6,52	0/0:4,0:4:5.94:0,6,90	1/1:0,18:18:44.95:369,45,0	0/0:9,0:9:21.04:0,21,218	0/0:10,0:10:4.64:0,5,205	0/0:21,1:18:45.11:0,45,480
chr10	11246049	.	C	CT	274.14	PASS	AB=0.936;AC=6;AF=0.107;AN=56;BaseQRankSum=1.474;DP=630;FS=2.956;HRun=11;HaplotypeScore=87.4393;InbreedingCoeff=0.5559;MQ=72.44;MQ0=1;MQRankSum=-0.466;QD=3.70;ReadPosRankSum=-0.937;VQSLOD=0.7245;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:48:99:0,117,849	0/0:12,0:12:29.88:0,30,232	0/0:19,0:15:20.78:0,21,200	0/0:14,0:12:12.38:0,12,92	1/1:22,0:22:44.32:262,44,0	0/0:17,1:19:22.37:0,22,342	0/0:21,4:25:11.35:0,11,271	0/0:34,0:34:63.10:0,63,486	0/0:18,0:18:44.82:0,45,348	0/0:24,1:26:33.32:0,33,421	0/0:12,0:12:3.89:0,4,182	0/0:22,0:22:62.93:0,63,469	0/0:17,0:18:49.64:0,50,364	0/0:18,0:18:50.09:0,50,356	0/0:29,1:30:29.03:0,29,426	0/0:19,0:20:32.60:0,33,277	0/0:33,0:35:69.73:0,70,522	0/0:22,1:24:19.35:0,19,323	0/1:19,1:20:21.95:22,0,158	0/0:13,2:15:4.44:0,4,206	0/0:30,2:32:44.22:0,44,525	0/0:21,0:21:59.58:0,60,453	0/0:13,0:13:26.37:0,26,208	0/1:21,2:23:7.75:8,0,303	1/1:9,0:9:20.34:115,20,0	0/0:37,0:37:67.57:0,68,534	0/0:24,1:25:29.25:0,29,406	0/0:16,0:17:46.84:0,47,354
chr10	11246059	.	T	TC	860.80	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=-2.225;DP=653;FS=11.400;HRun=0;HaplotypeScore=87.6869;InbreedingCoeff=0.5241;MQ=74.50;MQ0=1;MQRankSum=0.755;QD=8.78;ReadPosRankSum=0.851;VQSLOD=2.9341;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:51:99:0,146,1676	0/0:11,0:11:33.09:0,33,432	0/0:23,0:19:47.73:0,48,427	0/0:20,0:17:27.67:0,28,229	1/1:1,21:22:47.20:618,47,0	0/0:21,0:21:57.67:0,58,719	0/0:19,0:19:43.56:0,44,584	0/0:37,0:37:83.40:0,83,1134	0/0:21,0:21:60.61:0,61,735	0/0:31,0:31:81.74:0,82,934	0/0:14,0:14:33.94:0,34,420	0/1:24,0:24:25.39:25,0,41	0/0:17,0:17:13.36:0,13,50	0/1:21,0:21:14.74:50,0,15	0/0:30,0:30:85.61:0,86,1052	0/0:17,0:18:35.31:0,35,546	0/0:34,0:34:92.69:0,93,1109	0/0:22,0:22:57.65:0,58,712	0/0:15,0:15:35.32:0,35,404	0/0:19,0:18:45.58:0,46,520	0/0:34,0:34:94:0,94,1141	0/1:22,0:22:12.13:24,0,12	0/0:13,0:13:36.55:0,37,433	0/0:22,0:23:54.96:0,55,726	1/1:0,9:9:21.07:286,21,0	0/0:38,0:37:99:0,102,1186	0/0:27,0:27:70.41:0,70,858	0/0:17,0:17:47.89:0,48,625
chr10	11246311	.	AC	A	1920.25	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=6.723;DP=479;FS=24.968;HRun=3;HaplotypeScore=48.2762;InbreedingCoeff=0.9911;MQ=84.92;MQ0=0;MQRankSum=-0.937;QD=33.69;ReadPosRankSum=5.069;VQSLOD=1.6178;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:72.22:0,72,1015	0/0:10,0:10:27.09:0,27,388	0/0:23,0:23:69.19:0,69,911	0/0:12,0:12:30.07:0,30,388	0/0:16,0:16:45.15:0,45,646	0/0:22,0:22:60.20:0,60,863	0/0:23,0:23:69.22:0,69,976	0/0:20,0:20:51.17:0,51,731	0/0:14,0:14:42.11:0,42,566	0/0:12,0:12:36.11:0,36,500	0/0:7,0:7:21.07:0,21,302	1/1:0,15:15:45.14:557,45,0	1/1:0,15:15:45.14:557,45,0	1/1:1,15:16:45.14:557,45,0	0/0:24,0:24:69.21:0,69,959	0/0:6,0:6:18.06:0,18,259	0/0:22,0:22:51.17:0,51,733	0/0:20,0:20:60.20:0,60,863	0/0:19,0:19:54.17:0,54,755	0/0:9,0:9:24.08:0,24,344	0/0:39,0:39:99:0,114,1601	1/1:0,11:11:33.10:409,33,0	0/0:6,0:6:15.05:0,15,210	0/0:16,0:16:48.16:0,48,691	0/0:23,0:23:66.22:0,66,948	0/0:24,0:24:72.24:0,72,1022	0/0:15,0:15:45.06:0,45,605	0/0:14,0:14:36.12:0,36,516
chr10	11246384	.	C	CTT	908.44	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=3.447;DP=335;FS=8.098;HRun=14;HaplotypeScore=51.7451;InbreedingCoeff=0.6644;MQ=64.03;MQ0=11;MQRankSum=-5.679;QD=9.08;ReadPosRankSum=-5.963;VQSLOD=-0.5569;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:15:8.38:0,8,142	0/0:7,0:7:2.58:0,3,66	0/0:5,0:5:2.82:0,3,25	0/0:9,0:6:2.98:0,3,25	0/0:15,0:14:17.38:0,17,148	0/0:16,0:17:41.62:0,42,338	0/0:6,0:7:8.67:0,9,62	1/1:11,9:21:32.21:331,32,0	0/0:10,0:11:11.84:0,12,142	0/0:15,0:14:31.55:0,32,273	0/0:8,0:8:4.99:0,5,131	1/1:5,0:7:10.24:91,10,0	1/1:6,1:10:15.84:140,16,0	1/1:6,1:8:16.18:145,16,0	0/0:16,0:15:28.59:0,29,231	0/0:5,0:6:11.61:0,12,87	0/0:25,0:24:44.51:0,45,358	0/1:15,0:12:6.47:6,0,85	1/1:13,3:18:28.74:282,29,0	1/1:2,3:5:8.92:78,9,0	1/1:6,0:10:2.37:8,2,0	1/1:2,0:3:1.77:3,2,0	0/0:6,0:6:8.93:0,9,75	0/0:4,0:5:2.66:0,3,12	0/0:11,0:10:5.87:0,6,50	0/0:21,0:21:26.45:0,26,220	0/0:23,0:22:41.44:0,41,334	0/0:8,0:9:14.69:0,15,112
chr10	11246628	.	AC	A	4240.34	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-3.156;DP=352;FS=12.825;HRun=2;HaplotypeScore=44.6841;InbreedingCoeff=0.7591;MQ=71.74;MQ0=13;MQRankSum=-5.482;QD=14.72;ReadPosRankSum=2.771;VQSLOD=2.8650;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:24:52.24:371,52,0	1/1:11,0:9:11.30:86,11,0	0/0:37,0:8:20.72:0,21,173	0/0:27,0:14:26.84:0,27,255	1/1:10,0:10:13.89:69,14,0	1/1:11,0:9:15.45:125,15,0	1/1:10,0:10:17.87:148,18,0	1/1:15,0:14:38.64:312,39,0	1/1:10,0:10:23.98:161,24,0	1/1:10,0:9:17.82:156,18,0	1/1:3,0:3:8.97:70,9,0	1/1:8,0:8:17.45:111,17,0	1/1:5,0:5:7.10:34,7,0	1/1:9,0:8:18.39:121,18,0	1/1:13,0:13:30.65:239,31,0	1/1:5,0:5:11.94:92,12,0	1/1:27,1:27:66.21:481,66,0	1/1:14,0:14:20.18:154,20,0	1/1:8,0:8:20.98:179,21,0	1/1:7,0:7:17.99:151,18,0	1/1:12,0:11:26.95:197,27,0	1/1:2,0:2:5.67:36,6,0	1/1:5,0:5:8.93:66,9,0	1/1:15,2:17:19.08:132,19,0	1/1:9,0:9:6.49:34,6,0	1/1:16,0:15:38.98:344,39,0	1/1:13,1:13:25.54:185,26,0	1/1:12,0:12:23.17:187,23,0
chr10	11246747	.	CCAAGCATT	C	712.96	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.747;DP=606;FS=16.783;HRun=0;HaplotypeScore=148.2252;InbreedingCoeff=0.9748;MQ=75.18;MQ0=0;MQRankSum=-5.090;QD=25.46;ReadPosRankSum=-0.619;VQSLOD=2.4396;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,120,5150	0/0:5,0:5:12.04:0,12,535	0/0:15,0:14:36.10:0,36,1386	0/0:25,0:24:69.19:0,69,2712	1/1:1,15:16:18.06:281,18,0	0/0:20,0:20:60.19:0,60,2479	0/0:19,0:19:54.19:0,54,2217	0/0:30,0:30:87.29:0,87,3653	0/0:17,0:17:48.16:0,48,2044	0/0:24,0:24:66.23:0,66,2934	0/0:12,0:12:36.11:0,36,1462	0/0:24,0:24:63.21:0,63,2651	0/0:24,0:24:72.23:0,72,2655	0/0:20,0:20:54.19:0,54,2233	0/0:24,0:24:66.21:0,66,2569	0/0:19,0:19:54.18:0,54,2307	0/0:40,0:40:99:0,117,4856	0/0:25,0:25:75.26:0,75,3274	0/0:14,0:14:36.12:0,36,1429	0/0:14,0:14:39.13:0,39,1631	0/0:54,0:54:99:0,157,6487	0/0:21,0:21:60.18:0,60,2247	0/0:10,0:10:21.07:0,21,795	0/0:31,0:31:81.27:0,81,3208	1/1:0,12:12:21.07:551,21,0	0/0:20,0:20:57.17:0,57,2011	0/0:20,0:19:57.19:0,57,2106	0/0:11,0:11:24.08:0,24,1072
chr10	11247924	.	AT	A	1479.31	PASS	AB=0.857;AC=14;AF=0.250;AN=56;BaseQRankSum=9.257;DP=498;FS=0.000;HRun=11;HaplotypeScore=54.9562;InbreedingCoeff=0.7903;MQ=68.06;MQ0=0;MQRankSum=-0.172;QD=12.23;ReadPosRankSum=-3.145;VQSLOD=2.3119;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:66.14:0,66,683	0/0:8,0:8:15.04:0,15,160	0/0:11,0:10:20.83:0,21,178	0/0:5,0:4:6.01:0,6,61	1/1:1,11:12:23.85:189,24,0	0/0:28,0:28:69.16:0,69,723	0/0:20,0:20:39.10:0,39,416	1/1:2,15:17:44.93:367,45,0	0/0:23,2:25:13.85:0,14,543	0/0:18,0:19:35.25:0,35,410	0/0:21,2:23:26.42:0,26,457	0/0:19,0:19:48.11:0,48,505	0/0:14,0:14:33.06:0,33,338	0/0:16,0:16:39.08:0,39,408	0/0:22,1:23:29.43:0,29,497	0/1:19,3:22:16.83:17,0,443	0/0:33,0:33:90.21:0,90,951	0/0:21,1:22:35.49:0,35,574	1/1:4,15:20:44.42:350,44,0	1/1:4,13:17:38.06:295,38,0	1/1:4,7:11:14.98:123,15,0	0/0:7,0:7:18.02:0,18,177	0/0:12,0:12:30.04:0,30,308	0/0:15,0:15:39.09:0,39,409	1/1:1,16:17:38.95:320,39,0	0/0:21,0:21:42.10:0,42,442	0/0:25,1:26:29.48:0,29,512	0/1:4,1:5:9.62:10,0,105
chr10	11248317	.	GA	G	7032.25	PASS	AB=0.673;AC=47;AF=0.839;AN=56;BaseQRankSum=-2.117;DP=661;FS=1.783;HRun=13;HaplotypeScore=90.9312;InbreedingCoeff=0.0211;MQ=68.30;MQ0=1;MQRankSum=-3.024;QD=10.64;ReadPosRankSum=7.171;VQSLOD=4.4018;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,24:33:24.40:343,24,0	1/1:1,6:7:20.70:145,21,0	0/1:18,0:13:1.40:1,0,95	0/1:17,1:14:0.64:1,0,118	0/1:5,16:21:10.76:252,0,11	1/1:3,16:21:20.98:271,21,0	1/1:6,25:32:67.56:485,68,0	0/1:7,0:28:12.85:13,0,58	0/1:8,19:27:4.75:349,0,5	0/1:9,23:34:11.22:371,0,11	1/1:4,14:18:35.64:256,36,0	1/1:11,13:25:39.39:291,39,0	1/1:5,14:20:37.81:268,38,0	1/1:5,18:23:13.46:237,13,0	1/1:3,21:25:52.73:377,53,0	1/1:5,16:21:12.46:255,12,0	0/1:8,23:32:37.33:367,0,37	1/1:6,17:24:52.41:390,52,0	1/1:1,0:22:20.70:81,21,0	1/1:1,0:28:12.45:83,12,0	1/1:0,0:22:21.28:78,21,0	0/1:11,16:29:26.51:234,0,27	1/1:1,12:13:32.79:241,33,0	1/1:7,25:32:36.37:427,36,0	1/1:5,15:21:11.51:239,12,0	1/1:1,17:18:47.72:350,48,0	1/1:1,24:26:55.69:399,56,0	0/1:9,14:23:13.70:229,0,14
chr10	11250351	.	CTTGT	C	16427.48	PASS	AB=0.803;AC=44;AF=0.786;AN=56;BaseQRankSum=10.582;DP=664;FS=0.474;HRun=0;HaplotypeScore=116.0335;InbreedingCoeff=0.8277;MQ=66.26;MQ0=0;MQRankSum=-0.621;QD=29.49;ReadPosRankSum=7.150;VQSLOD=4.2801;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,23:42:54.72:978,55,0	1/1:5,10:15:24.08:394,24,0	0/1:25,0:21:2.49:2,0,384	0/0:23,0:21:33.11:0,33,747	1/1:10,14:24:39.13:641,39,0	1/1:10,16:26:41.91:690,42,0	1/1:2,17:19:42.14:691,42,0	0/0:36,0:36:66.23:0,66,1513	1/1:6,18:24:42.14:690,42,0	1/1:6,22:28:63.20:1001,63,0	1/1:8,9:17:27.09:444,27,0	1/1:6,13:20:36.12:570,36,0	1/1:6,12:18:30.10:493,30,0	1/1:4,13:17:36.12:592,36,0	1/1:3,24:27:66.18:1046,66,0	1/1:3,15:18:42.14:682,42,0	0/1:7,13:20:21.07:460,0,21	1/1:8,19:27:46.45:786,46,0	0/0:13,0:13:18.05:0,18,362	0/0:18,0:18:39.13:0,39,920	0/0:17,0:17:36.12:0,36,877	1/1:10,18:28:54.18:876,54,0	1/1:6,19:25:54.18:882,54,0	1/1:2,20:22:45.15:740,45,0	1/1:7,21:27:57.19:927,57,0	1/1:10,18:28:54.18:888,54,0	1/1:8,36:44:93.31:1509,93,0	1/1:6,9:15:27.09:444,27,0
chr10	11251247	.	CT	C	7176.43	PASS	AB=0.811;AC=37;AF=0.661;AN=56;BaseQRankSum=3.279;DP=570;FS=19.947;HRun=10;HaplotypeScore=69.3252;InbreedingCoeff=0.8292;MQ=72.39;MQ0=1;MQRankSum=-2.956;QD=17.46;ReadPosRankSum=4.790;VQSLOD=3.8150;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,41:45:99:990,114,0	1/1:2,5:7:11.99:104,12,0	0/1:14,3:15:51.10:51,0,158	0/0:15,0:13:24.03:0,24,247	1/1:4,0:30:25.28:97,25,0	1/1:0,12:12:35.99:312,36,0	1/1:2,14:16:32.98:286,33,0	0/0:27,0:27:35.27:0,35,331	1/1:3,12:15:32.99:286,33,0	1/1:2,14:16:41.99:364,42,0	1/1:2,18:20:53.99:469,54,0	0/0:10,0:10:27.04:0,27,274	0/0:21,0:21:54.15:0,54,597	0/0:10,0:10:30.02:0,30,310	1/1:0,20:20:56.99:495,57,0	0/1:4,10:14:0.19:227,0,0	1/1:9,30:39:86.94:755,87,0	1/1:1,25:26:74.98:651,75,0	0/0:29,0:30:25.49:0,25,169	0/0:23,0:23:17.82:0,18,181	0/1:12,0:12:0.45:0,0,44	0/0:23,0:23:48.12:0,48,528	1/1:3,18:21:44.55:457,45,0	1/1:1,12:13:35.99:313,36,0	1/1:2,0:19:24.92:73,25,0	1/1:4,21:25:62.96:542,63,0	1/1:4,25:28:62.97:547,63,0	1/1:5,10:15:17.99:156,18,0
chr10	11251255	.	TTTC	T	2182.56	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-0.131;DP=535;FS=4.117;HRun=0;HaplotypeScore=104.0588;InbreedingCoeff=0.9631;MQ=63.44;MQ0=3;MQRankSum=-1.785;QD=17.74;ReadPosRankSum=-0.497;VQSLOD=3.3903;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,102,884	0/0:6,0:6:18:0,18,163	0/0:14,0:9:14.24:0,14,167	0/0:13,0:8:15.01:0,15,219	1/1:27,0:27:40.66:352,41,0	0/0:12,0:12:23.98:0,24,203	0/0:19,0:18:33.65:0,34,299	1/1:9,16:25:45.02:493,45,0	0/0:13,0:13:32.99:0,33,283	0/0:15,0:15:32.99:0,33,285	0/0:20,0:20:44.84:0,45,370	0/0:14,0:14:24.02:0,24,336	0/0:19,0:19:51.14:0,51,897	0/0:10,0:10:24.07:0,24,440	0/0:21,0:21:50.90:0,51,424	0/0:12,0:12:33:0,33,317	0/0:37,0:36:86.16:0,86,733	0/0:27,0:27:71.91:0,72,625	1/1:4,20:24:62.79:717,63,0	1/1:5,14:19:33.11:470,33,0	1/1:4,7:11:9.02:111,9,0	0/0:19,1:20:8.43:0,8,788	0/0:24,0:24:59.85:0,60,497	0/0:12,0:12:32.99:0,33,283	1/1:17,0:17:37.94:224,38,0	0/0:22,0:22:50.97:0,51,432	0/0:29,0:28:62.74:0,63,509	0/0:10,0:10:17.97:0,18,149
chr10	11252668	.	C	CT	1911.44	PASS	AB=0.877;AC=13;AF=0.232;AN=56;BaseQRankSum=-6.602;DP=593;FS=11.781;HRun=12;HaplotypeScore=67.1174;InbreedingCoeff=0.6989;MQ=69.54;MQ0=1;MQRankSum=2.661;QD=11.38;ReadPosRankSum=-3.264;VQSLOD=1.0897;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:74.39:0,74,540	0/0:7,0:7:14.91:0,15,109	0/1:21,0:12:7.83:8,0,42	0/1:14,0:11:22.58:23,0,33	0/1:12,17:29:33.73:319,0,34	0/0:26,0:26:62.45:0,62,450	0/0:16,0:18:45.83:0,46,318	1/1:15,20:37:40.86:530,41,0	0/0:19,2:23:11.51:0,12,237	0/0:26,0:27:58.50:0,58,411	0/0:20,0:21:37.73:0,38,267	0/0:16,0:17:43.79:0,44,312	0/0:23,1:25:32.44:0,32,391	0/0:21,0:21:44.67:0,45,323	0/0:17,0:17:29.77:0,30,219	0/0:15,0:15:35.77:0,36,260	0/0:36,0:37:82.40:0,82,587	0/0:20,0:20:35.70:0,36,263	1/1:6,12:18:33.04:314,33,0	1/1:2,17:19:36.01:339,36,0	1/1:3,5:9:17.86:160,18,0	0/0:11,0:11:23.83:0,24,175	0/0:14,0:16:34.80:0,35,245	0/0:19,1:20:16.04:0,16,267	1/1:5,14:20:26.01:401,26,0	0/0:25,0:25:68.60:0,69,503	0/0:23,0:24:58.70:0,59,421	0/0:16,0:18:45.81:0,46,318
chr10	11254220	.	TTATATATA	T	474.94	PASS	AB=0.851;AC=18;AF=0.600;AN=30;BaseQRankSum=1.846;DP=229;FS=4.761;HRun=0;HaplotypeScore=57.4650;InbreedingCoeff=0.2893;MQ=55.48;MQ0=10;MQRankSum=-2.996;QD=4.32;ReadPosRankSum=-1.301;VQSLOD=0.9284;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:6,0:5:0.53:1,0,41	1/1:1,3:4:6.02:152,6,0	./.	0/0:35,0:8:0.46:0,0,1	./.	./.	0/0:3,0:3:3.01:0,3,49	1/1:16,0:23:9.45:53,9,0	0/0:4,0:4:3.01:0,3,120	1/1:2,0:3:2.88:15,3,0	./.	./.	./.	1/1:3,0:5:3:27,3,0	0/0:4,0:4:0:0,0,0	./.	0/1:15,0:25:3.85:4,0,222	1/1:10,0:16:1.80:14,2,0	1/1:7,0:7:3.45:22,3,0	0/0:5,0:6:0:0,0,0	./.	./.	./.	./.	./.	./.	1/1:3,3:6:3.01:76,3,0	1/1:5,6:12:9.03:207,9,0
chr10	11254278	.	GTGTA	G	486.29	PASS	AB=1.000;AC=17;AF=0.315;AN=54;BaseQRankSum=0.614;DP=311;FS=15.580;HRun=0;HaplotypeScore=107.7289;InbreedingCoeff=0.2778;MQ=37.41;MQ0=16;MQRankSum=-3.120;QD=4.46;ReadPosRankSum=-2.927;VQSLOD=0.6554;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:8:5.93:0,6,69	0/0:8,0:8:12.04:0,12,277	0/0:30,0:13:39.13:0,39,779	0/0:21,0:7:21.07:0,21,506	1/1:5,7:12:2.91:56,3,0	0/0:5,0:5:3.01:0,3,80	./.	0/1:31,0:30:99:331,0,352	0/0:12,0:12:17.99:0,18,226	0/0:7,0:7:20.74:0,21,445	0/1:3,0:3:0:0,0,0	0/1:8,0:8:11.88:27,0,12	1/1:7,0:7:3.01:32,3,0	1/1:7,0:6:0.89:2,1,0	0/0:17,0:17:3.01:0,3,53	0/0:11,0:11:5.05:0,5,58	0/0:19,0:18:20.10:0,20,460	0/0:16,0:15:24.05:0,24,576	0/1:6,0:3:22.05:22,0,71	0/1:8,0:7:68.38:75,0,68	1/1:12,0:12:2.34:20,2,0	0/1:6,0:6:0:0,0,0	0/0:8,0:8:3.01:0,3,54	0/1:4,0:4:0:0,0,0	1/1:3,2:5:3.01:56,3,0	0/0:13,0:12:36.12:0,36,884	0/0:11,0:11:18:0,18,338	0/0:12,0:12:17.98:0,18,304
chr10	11254282	.	A	ATG	1577.90	PASS	AB=0.833;AC=21;AF=0.375;AN=56;BaseQRankSum=-2.659;DP=326;FS=0.000;HRun=0;HaplotypeScore=102.3849;InbreedingCoeff=0.6132;MQ=42.94;MQ0=16;MQRankSum=-2.349;QD=14.09;ReadPosRankSum=-1.200;VQSLOD=3.0794;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:9:3.01:0,3,39	0/0:8,0:8:12.04:0,12,152	0/0:35,0:18:48.13:0,48,590	0/0:23,0:9:24.07:0,24,304	1/1:9,4:13:2.99:23,3,0	0/0:5,0:5:3.01:0,3,39	0/0:5,0:6:2.97:0,3,20	1/1:17,16:32:72.11:1073,72,0	0/0:12,0:12:15.05:0,15,184	0/0:8,0:8:21.07:0,21,273	0/1:3,0:3:0:0,0,0	1/1:0,8:8:6.02:102,6,0	1/1:0,7:7:3.01:51,3,0	1/1:1,6:6:2.98:22,3,0	0/0:17,0:17:2.79:0,3,38	0/0:11,0:11:5.05:0,5,45	0/0:18,0:17:17.92:0,18,231	0/0:16,0:15:24.05:0,24,311	1/1:3,3:3:9:123,9,0	1/1:2,6:7:18.06:305,18,0	1/1:0,12:12:2.98:21,3,0	0/1:0,6:6:0:0,0,0	0/0:8,0:8:3.01:0,3,39	0/1:4,0:4:0:0,0,0	1/1:2,3:5:2.98:22,3,0	0/0:14,0:13:36.12:0,36,468	0/0:12,0:12:15.04:0,15,182	0/0:11,0:11:17.98:0,18,190
chr10	11254849	.	G	GC	102.12	PASS	AC=10;AF=0.833;AN=12;DP=16;FS=0.000;HRun=0;HaplotypeScore=70.6603;MQ=69.18;MQ0=0;QD=7.29;VQSLOD=3.0922;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	1/1:0,2:2:5.75:30,6,0	0/0:1,0:1:0:0,0,0	./.	1/1:0,2:2:2.48:12,2,0	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	1/1:0,5:5:14.14:68,14,0	./.	./.	1/1:1,1:2:2.88:15,3,0	./.	1/1:0,3:3:8.65:46,9,0	./.	./.	./.
chr10	11254922	.	A	AG	306.06	PASS	AC=18;AF=1.000;AN=18;DP=24;FS=0.000;HRun=0;HaplotypeScore=66.6618;MQ=27.74;MQ0=0;QD=12.75;VQSLOD=4.0762;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	1/1:0,2:2:5.91:39,6,0	./.	./.	1/1:1,4:5:5.59:27,6,0	./.	./.	./.	./.	1/1:3,4:6:9.02:108,9,0	./.	./.	1/1:0,1:1:3.01:34,3,0	./.	./.	./.	./.	./.	./.	1/1:0,2:2:5.84:35,6,0	./.	1/1:0,2:2:5.87:35,6,0	1/1:0,1:1:2.84:14,3,0	./.	1/1:0,2:2:5.88:36,6,0	1/1:0,2:2:5.99:49,6,0	./.	./.
chr10	11255099	.	CA	C	919.57	PASS	AC=28;AF=0.875;AN=32;BaseQRankSum=2.461;DP=41;FS=10.792;HRun=2;HaplotypeScore=63.0673;InbreedingCoeff=0.3196;MQ=73.89;MQ0=0;MQRankSum=-2.862;QD=25.54;ReadPosRankSum=1.946;VQSLOD=2.2633;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,2:2:3:29,3,0	./.	0/0:1,0:1:3:0,3,26	0/0:2,0:2:5.80:0,6,39	./.	1/1:0,2:2:6.01:59,6,0	./.	1/1:0,1:1:3.01:36,3,0	1/1:0,1:1:3:28,3,0	./.	./.	./.	1/1:0,2:2:6.01:55,6,0	1/1:0,4:4:12.01:109,12,0	1/1:0,3:3:9.02:95,9,0	1/1:0,7:7:21.04:213,21,0	1/1:0,4:4:12.03:132,12,0	1/1:0,2:2:6.02:75,6,0	1/1:0,2:2:6.02:72,6,0	./.	./.	./.	./.	1/1:0,4:4:5.04:44,5,0	./.	1/1:0,1:1:3.01:36,3,0	1/1:0,1:1:3.01:35,3,0	./.
chr10	11255104	.	T	TC	1017.09	PASS	AC=28;AF=0.875;AN=32;BaseQRankSum=2.386;DP=41;FS=10.669;HRun=1;HaplotypeScore=62.5010;InbreedingCoeff=0.2891;MQ=73.89;MQ0=0;MQRankSum=-2.858;QD=28.25;ReadPosRankSum=1.267;VQSLOD=2.2378;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,2:2:3.01:34,3,0	./.	0/0:1,0:1:2.94:0,3,18	0/0:2,0:2:4.25:0,4,32	./.	1/1:0,2:2:6.02:68,6,0	./.	1/1:0,1:1:3.01:40,3,0	1/1:0,1:1:3.01:33,3,0	./.	./.	./.	1/1:0,2:2:6.02:67,6,0	1/1:0,4:4:12.03:126,12,0	1/1:0,3:3:8.97:85,9,0	1/1:0,7:7:21.06:246,21,0	1/1:0,4:4:12.04:152,12,0	1/1:0,2:2:6.02:85,6,0	1/1:0,2:2:6.02:80,6,0	./.	./.	./.	./.	1/1:0,4:4:2.71:19,3,0	./.	1/1:0,1:1:3.01:40,3,0	1/1:0,1:1:3.01:40,3,0	./.
chr10	11255191	.	A	AT	222.62	PASS	AC=12;AF=0.600;AN=20;BaseQRankSum=3.472;DP=28;FS=24.423;HRun=0;HaplotypeScore=57.2593;InbreedingCoeff=0.4857;MQ=153.44;MQ0=0;MQRankSum=-3.740;QD=14.84;ReadPosRankSum=3.740;VQSLOD=2.5684;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,4:4:12.02:119,12,0	./.	0/0:2,0:4:9.16:0,9,36	0/0:5,0:6:6.79:0,7,27	./.	./.	1/1:0,4:4:6.01:61,6,0	1/1:0,2:2:5.89:38,6,0	1/1:0,1:1:3.01:31,3,0	1/1:0,1:1:3.01:35,3,0	./.	./.	./.	./.	0/0:1,0:1:0.47:0,0,1	./.	1/1:0,3:3:3.48:31,3,0	./.	./.	./.	./.	./.	./.	0/0:1,1:2:0.40:0,0,1	./.	./.	./.	./.
chr10	11256397	.	A	AT	19022.87	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-5.126;DP=578;FS=0.768;HRun=5;HaplotypeScore=65.8638;InbreedingCoeff=0.9944;MQ=83.61;MQ0=0;MQRankSum=-8.438;QD=34.90;ReadPosRankSum=4.764;VQSLOD=4.6376;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,16:16:42.14:553,42,0	1/1:0,6:6:18.06:237,18,0	0/0:19,0:19:42:0,42,436	0/0:14,0:14:33.08:0,33,351	1/1:2,23:25:72.23:943,72,0	1/1:1,25:26:78.24:1013,78,0	1/1:3,13:16:36.12:474,36,0	1/1:4,21:25:63.20:829,63,0	1/1:1,21:22:54.18:711,54,0	1/1:2,23:25:69.22:908,69,0	1/1:2,19:21:63.12:801,63,0	1/1:3,15:18:42.14:553,42,0	1/1:1,21:22:60.20:789,60,0	1/1:1,20:21:57.19:750,57,0	1/1:5,19:24:57.19:750,57,0	1/1:2,21:23:63.20:829,63,0	1/1:1,26:27:78.25:1026,78,0	1/1:2,26:28:78.25:1026,78,0	1/1:1,11:12:33.10:420,33,0	1/1:4,23:27:60.20:789,60,0	1/1:0,21:21:54.18:711,54,0	1/1:4,21:25:63.16:809,63,0	1/1:1,17:18:45.15:592,45,0	1/1:1,16:17:42.14:553,42,0	1/1:2,16:18:48.16:631,48,0	1/1:2,30:32:93.26:1181,93,0	1/1:0,22:22:63.20:829,63,0	1/1:0,8:8:24.08:316,24,0
chr10	11258113	.	CT	C	2124.60	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=13.112;DP=645;FS=1.102;HRun=11;HaplotypeScore=85.4373;InbreedingCoeff=0.9288;MQ=73.42;MQ0=3;MQRankSum=1.166;QD=9.70;ReadPosRankSum=4.598;VQSLOD=2.9063;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,0:48:77.41:224,77,0	0/0:10,0:11:30.07:0,30,311	0/0:25,2:20:9.18:0,9,268	0/0:26,0:18:0.86:0,1,170	1/1:6,17:23:50.12:411,50,0	1/1:0,0:21:28.52:82,29,0	1/1:0,0:15:26.48:77,26,0	0/0:39,0:39:79.24:0,79,794	1/1:1,0:18:26.48:77,26,0	0/0:20,0:20:48.11:0,48,504	0/0:15,0:15:36.08:0,36,377	1/1:4,14:18:6.97:264,7,0	1/1:1,18:19:41.94:344,42,0	1/1:4,13:17:26.96:222,27,0	0/0:17,1:18:14.33:0,14,342	0/0:24,0:24:62.99:0,63,654	0/0:40,4:44:20.31:0,20,1017	0/0:28,0:28:66.15:0,66,695	0/0:21,1:23:32.45:0,32,533	0/0:19,2:22:7.68:0,8,470	0/0:17,0:18:47.94:0,48,486	1/1:4,19:23:47.90:393,48,0	0/0:22,0:22:54.05:0,54,548	0/0:21,0:21:60.15:0,60,640	1/1:2,15:17:29.96:246,30,0	0/0:24,0:25:56.96:0,57,580	0/0:22,0:22:48.12:0,48,511	0/0:21,0:21:45.11:0,45,477
chr10	11258394	.	A	AT	14491.09	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-15.657;DP=673;FS=0.286;HRun=2;HaplotypeScore=60.9432;InbreedingCoeff=0.9987;MQ=81.44;MQ0=0;MQRankSum=-3.182;QD=40.25;ReadPosRankSum=1.614;VQSLOD=5.1652;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,47:48:99:1799,120,0	0/0:8,0:8:18.06:0,18,234	0/0:18,0:18:48.15:0,48,607	0/0:26,0:26:72.06:0,72,831	1/1:1,21:22:63.21:941,63,0	1/1:1,22:22:66.22:988,66,0	1/1:0,27:27:72.24:1079,72,0	1/1:1,38:39:99:1682,114,0	1/1:0,19:19:54.18:808,54,0	0/0:27,0:27:78.23:0,78,997	0/0:17,0:17:51.16:0,51,658	1/1:3,25:28:66.22:989,66,0	1/1:1,23:24:66.22:989,66,0	1/1:3,17:20:54.18:797,54,0	0/0:28,0:28:84.26:0,84,1075	0/0:28,0:28:84.27:0,84,1090	0/0:33,0:33:99:0,99,1268	0/0:29,0:28:84.24:0,84,1059	1/1:0,23:23:69.21:991,69,0	1/1:0,21:21:60.20:887,60,0	1/1:2,24:26:63.20:923,63,0	1/1:0,25:25:69.23:1034,69,0	0/0:20,0:20:57.17:0,57,725	0/0:18,0:18:51.17:0,51,662	1/1:0,15:15:39.12:584,39,0	0/0:32,0:32:96.31:0,96,1246	0/0:20,0:20:57.19:0,57,740	0/0:9,0:9:27.09:0,27,349
chr10	11362000	.	GAC	G	520.16	PASS	AC=22;AF=0.524;AN=42;BaseQRankSum=6.617;DP=542;FS=16.273;HRun=0;HaplotypeScore=82.2040;InbreedingCoeff=0.6904;MQ=79.46;MQ0=17;MQRankSum=-4.173;QD=17.34;ReadPosRankSum=2.608;VQSLOD=2.6422;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:70,0:70:99:0,205,3853	./.	0/0:46,0:43:99:0,129,2263	0/0:30,0:29:87.30:0,87,1605	./.	0/0:45,1:46:89.67:0,90,2483	0/0:33,0:33:13.94:0,14,1581	0/0:54,0:54:99:0,156,2788	1/1:0,1:1:3.01:46,3,0	1/1:3,1:3:6.02:80,6,0	1/1:0,3:1:3.01:46,3,0	1/1:0,5:1:3.01:46,3,0	1/1:0,2:2:3.01:46,3,0	1/1:0,1:1:3.01:46,3,0	./.	1/1:0,3:1:3.01:46,3,0	1/1:0,3:3:6.02:92,6,0	1/1:0,2:2:3.01:46,3,0	0/0:48,0:48:99:0,144,2605	0/0:96,0:96:99:0,289,5351	0/0:37,0:37:99:0,111,2098	./.	./.	1/1:0,2:1:3.01:46,3,0	0/0:47,0:47:99:0,138,2639	1/1:0,4:3:9.03:138,9,0	./.	./.
chr10	11373373	.	AG	A	634.72	PASS	AB=0.726;AC=3;AF=0.214;AN=14;BaseQRankSum=5.007;DP=378;FS=0.000;HRun=3;HaplotypeScore=26.5077;MQ=29.41;MQ0=117;MQRankSum=-1.526;QD=4.23;ReadPosRankSum=0.668;VQSLOD=0.2293;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:33,0:2:3.01:0,3,32	0/0:20,0:1:2.96:0,3,19	./.	./.	./.	0/1:27,25:27:99:476,0,437	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	0/1:28,12:22:99:231,0,516	0/0:45,12:47:18.06:0,18,259	0/1:37,21:43:0:0,0,0	./.	./.	./.	0/0:21,0:12:3.01:0,3,43	./.	./.	./.
chr10	11376082	.	CAGA	C	403.64	PASS	AC=8;AF=0.667;AN=12;BaseQRankSum=3.369;DP=132;FS=18.944;HRun=0;HaplotypeScore=27.6511;MQ=26.29;MQ0=69;MQRankSum=-3.626;QD=17.55;ReadPosRankSum=-2.186;VQSLOD=0.7184;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:31:33.11:0,33,813	./.	./.	./.	./.	1/1:0,4:3:9.03:164,9,0	1/1:1,5:4:12.04:223,12,0	1/1:3,1:1:3.01:51,3,0	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	1/1:1,8:4:3.01:56,3,0	./.	./.	./.	./.	0/0:14,0:11:21.07:0,21,517	./.	./.	./.
chr10	11378327	.	A	AC	138.60	PASS	AC=8;AF=0.364;AN=22;BaseQRankSum=3.648;DP=370;FS=7.634;HRun=0;HaplotypeScore=21.2554;InbreedingCoeff=0.6930;MQ=18.67;MQ0=192;MQRankSum=-1.312;QD=12.60;ReadPosRankSum=2.247;VQSLOD=3.2625;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:32:18.06:0,18,251	./.	./.	./.	./.	0/0:32,0:17:18.06:0,18,251	0/0:36,0:18:18.06:0,18,232	0/0:35,0:8:24.08:0,24,335	1/1:1,1:1:3.01:40,3,0	./.	./.	1/1:2,2:2:6.02:80,6,0	./.	./.	1/1:0,3:2:6.02:81,6,0	./.	0/0:1,4:2:0:0,0,0	./.	0/0:30,0:7:21.07:0,21,293	./.	0/0:63,0:13:8.95:0,9,125	./.	./.	./.	./.	1/1:0,2:1:3.01:39,3,0	./.	./.
chr10	11378441	.	TAC	T	715.28	PASS	AB=0.700;AC=4;AF=0.080;AN=50;BaseQRankSum=2.142;DP=342;FS=1.914;HRun=0;HaplotypeScore=44.2842;InbreedingCoeff=-0.1694;MQ=27.40;MQ0=102;MQRankSum=-0.398;QD=6.33;ReadPosRankSum=0.496;VQSLOD=2.6765;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:23:36.59:0,37,616	./.	0/0:32,1:6:15.01:0,15,221	0/0:35,0:6:12.04:0,12,188	0/0:1,0:1:3.01:0,3,51	0/0:21,0:20:36.12:0,36,625	0/0:23,0:18:30.10:0,30,530	0/1:20,20:18:99:320,0,375	0/0:3,0:2:6.02:0,6,104	0/0:3,0:1:3.01:0,3,53	./.	0/0:6,0:2:6.02:0,6,106	0/0:1,0:1:3.01:0,3,53	0/0:2,0:1:3.01:0,3,51	0/0:8,0:6:15.05:0,15,261	0/0:3,0:2:6.02:0,6,104	0/0:9,0:8:21.07:0,21,371	0/0:2,0:2:6.02:0,6,106	0/1:32,5:12:90.50:90,0,387	0/1:4,7:8:87.88:141,0,88	0/1:11,14:21:99:268,0,267	0/0:6,0:3:9.03:0,9,156	./.	0/0:9,0:9:27.09:0,27,455	0/0:18,0:15:30.10:0,30,530	0/0:4,0:2:6.02:0,6,106	0/0:4,0:1:3.01:0,3,53	0/0:3,0:1:3.01:0,3,53
chr10	11383513	.	TATG	T	752.40	PASS	AC=4;AF=0.200;AN=20;BaseQRankSum=4.435;DP=322;FS=2.130;HRun=0;HaplotypeScore=149.5922;InbreedingCoeff=0.9814;MQ=63.52;MQ0=12;MQRankSum=-0.182;QD=22.80;ReadPosRankSum=1.190;VQSLOD=3.8368;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:49:99:0,102,2329	./.	0/0:35,0:23:65.89:0,66,1289	0/0:37,0:25:69.15:0,69,1355	./.	1/1:2,23:20:39.13:648,39,0	1/1:1,7:8:12.04:205,12,0	0/0:28,0:18:51.18:0,51,1173	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	0/0:21,0:17:45.15:0,45,1024	0/0:35,0:33:84.28:0,84,1872	0/0:27,0:26:75.26:0,75,1671	./.	./.	./.	0/0:46,0:43:99:0,117,2690	./.	./.	./.
chr10	11384181	.	A	AAAAG	83.81	PASS	AC=6;AF=0.333;AN=18;BaseQRankSum=2.848;DP=173;FS=1.632;HRun=0;HaplotypeScore=42.9156;MQ=27.72;MQ0=59;MQRankSum=-0.715;QD=2.33;ReadPosRankSum=-1.984;VQSLOD=1.0939;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:28:75:0,75,1321	./.	0/0:27,0:5:15.05:0,15,304	0/0:16,0:5:12.04:0,12,243	./.	1/1:1,0:1:2.84:14,3,0	0/0:13,0:9:6.79:0,7,36	0/0:7,0:1:2.97:0,3,20	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	1/1:3,0:10:3.01:55,3,0	1/1:9,1:15:11.88:109,12,0	./.	./.	./.	0/0:18,0:15:30.10:0,30,590	./.	./.	./.
chr10	11395752	.	TG	T	172.67	PASS	AC=8;AF=0.333;AN=24;BaseQRankSum=4.716;DP=230;FS=9.813;HRun=4;HaplotypeScore=58.2883;InbreedingCoeff=0.8086;MQ=32.39;MQ0=71;MQRankSum=-3.778;QD=21.58;ReadPosRankSum=2.305;VQSLOD=2.1815;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:39:84.15:0,84,1108	./.	./.	./.	1/1:0,4:4:12.04:140,12,0	0/0:16,0:15:30.10:0,30,418	0/0:11,0:9:24.08:0,24,335	0/0:18,0:7:21.07:0,21,287	./.	./.	1/1:0,1:1:3.01:36,3,0	./.	./.	./.	./.	./.	1/1:0,1:1:3.01:36,3,0	./.	0/0:12,0:8:24.08:0,24,336	0/0:30,2:27:72.20:0,72,980	0/0:13,0:12:18.06:0,18,248	1/1:0,2:2:6.02:71,6,0	./.	./.	0/0:36,0:29:78.18:0,78,1047	./.	./.	./.
chr10	11395968	.	TGGTG	T	1061.48	PASS	AC=32;AF=0.593;AN=54;BaseQRankSum=8.233;DP=383;FS=27.714;HRun=0;HaplotypeScore=56.8591;InbreedingCoeff=0.6346;MQ=49.82;MQ0=23;MQRankSum=-6.848;QD=21.66;ReadPosRankSum=-3.034;VQSLOD=1.2149;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:92,0:92:99:0,262,6959	1/1:2,0:2:2.97:20,3,0	0/0:23,0:3:9.03:0,9,233	0/0:21,0:4:11.63:0,12,257	1/1:2,3:5:3.01:52,3,0	0/0:20,1:21:40.21:0,40,1524	0/0:12,2:13:30.10:0,30,806	0/0:36,0:31:90.31:0,90,2464	1/1:0,2:2:6.02:116,6,0	1/1:0,5:5:12.04:225,12,0	1/1:0,5:5:3.01:58,3,0	1/1:2,0:2:2.97:20,3,0	1/1:0,2:2:3.01:58,3,0	1/1:0,2:2:3.01:58,3,0	1/1:1,0:1:2.97:20,3,0	./.	1/1:3,2:5:3.01:58,3,0	1/1:0,1:1:3.01:58,3,0	0/0:23,0:13:33.11:0,33,905	0/0:29,0:28:81.28:0,81,2174	0/0:35,0:35:76.33:0,76,2494	1/1:2,2:2:3.01:58,3,0	1/1:0,5:5:6.02:92,6,0	0/0:0,1:1:0:0,0,0	0/0:39,0:39:99:0,117,3123	1/1:0,3:3:6.02:116,6,0	1/1:0,3:3:6.02:116,6,0	1/1:0,2:2:6.02:116,6,0
chr10	11396305	.	A	AG	45.41	PASS	AB=0.833;AC=2;AF=0.037;AN=54;BaseQRankSum=4.537;DP=672;FS=1.171;HRun=1;HaplotypeScore=129.2042;InbreedingCoeff=-0.0642;MQ=63.40;MQ0=6;MQRankSum=0.290;QD=4.54;ReadPosRankSum=-0.775;VQSLOD=-0.0150;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:69,1:70:99:0,163,2413	0/0:8,0:5:3.01:0,3,39	0/0:39,0:37:97.27:0,97,1315	0/0:54,0:49:99:0,103,1583	0/0:18,0:8:6.02:0,6,78	0/0:47,0:44:99:0,114,1479	0/0:26,0:22:51.15:0,51,648	0/0:54,0:48:99:0,135,1724	0/0:19,0:13:21.07:0,21,272	0/0:22,0:14:36.07:0,36,435	0/0:11,0:6:9.03:0,9,116	0/0:10,0:9:15.05:0,15,194	0/0:16,0:8:18.06:0,18,233	0/0:14,0:10:18.06:0,18,233	0/0:10,0:5:15.05:0,15,193	0/0:6,0:4:9.03:0,9,117	0/1:4,0:3:16.46:16,0,66	0/0:11,0:9:9.03:0,9,117	0/0:36,0:33:87.27:0,87,1110	0/0:42,0:37:90.28:0,90,1154	0/0:35,0:35:90.25:0,90,1125	0/0:17,0:11:15.05:0,15,194	0/0:17,0:11:18.06:0,18,233	./.	0/0:45,0:45:99:0,100,1535	0/0:17,0:11:30.10:0,30,387	0/0:16,0:6:3.01:0,3,39	0/1:3,3:4:26.83:115,0,27
chr10	11396500	.	GT	G	14348.24	PASS	AB=0.705;AC=42;AF=0.750;AN=56;BaseQRankSum=18.113;DP=835;FS=2.757;HRun=3;HaplotypeScore=135.9245;InbreedingCoeff=0.4263;MQ=52.62;MQ0=9;MQRankSum=-7.031;QD=21.58;ReadPosRankSum=2.327;VQSLOD=4.3675;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:61,0:61:99:0,175,2431	1/1:0,15:14:36.11:446,36,0	0/0:38,0:24:59.84:0,60,785	0/0:30,0:17:48.13:0,48,643	1/1:0,19:18:42.13:505,42,0	0/1:22,24:46:99:687,0,776	0/1:20,9:29:99:194,0,550	0/1:27,30:55:99:771,0,834	1/1:1,24:25:66.21:818,66,0	1/1:2,33:29:78.21:946,78,0	1/1:1,28:29:72.22:885,72,0	1/1:0,21:21:63.20:781,63,0	1/1:1,22:22:60.19:743,60,0	1/1:0,27:26:66.21:814,66,0	1/1:0,14:12:27.08:335,27,0	1/1:0,13:13:36.11:446,36,0	1/1:1,36:37:49.24:1033,49,0	1/1:0,16:16:39.12:483,39,0	0/1:24,11:30:99:284,0,734	0/1:35,27:60:99:612,0,1257	0/1:27,21:48:99:640,0,982	1/1:1,16:15:33.10:408,33,0	1/1:1,22:23:48.15:591,48,0	1/1:0,15:14:36.11:446,36,0	0/0:41,0:41:99:0,120,1699	1/1:1,20:17:48.15:593,48,0	1/1:0,28:21:57.18:701,57,0	1/1:0,10:8:15.05:186,15,0
chr10	11396884	.	A	ACC	16459.05	PASS	AB=0.761;AC=42;AF=0.750;AN=56;BaseQRankSum=14.747;DP=714;FS=0.000;HRun=0;HaplotypeScore=121.4835;InbreedingCoeff=0.4034;MQ=59.08;MQ0=5;MQRankSum=-10.507;QD=33.45;ReadPosRankSum=6.597;VQSLOD=6.8223;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:81,0:80:99:0,238,3769	1/1:0,7:6:15.05:305,15,0	0/0:60,0:53:99:0,144,2284	0/0:48,0:44:99:0,129,2046	1/1:0,12:13:24.08:487,24,0	0/1:21,6:27:99:286,0,900	0/1:18,14:32:99:533,0,659	0/1:29,5:33:99:140,0,1275	1/1:0,21:20:39.13:790,39,0	1/1:0,22:24:69.20:1326,69,0	1/1:0,18:18:51.18:1034,51,0	1/1:0,15:15:33.11:669,33,0	1/1:0,13:13:36.12:730,36,0	1/1:1,18:19:51.17:1030,51,0	1/1:0,20:20:48.16:972,48,0	1/1:0,17:18:45.15:912,45,0	1/1:0,21:21:57.20:1153,57,0	1/1:1,9:10:27.09:548,27,0	0/1:19,7:27:99:369,0,849	0/1:23,18:36:99:741,0,877	0/1:36,21:58:99:998,0,1454	1/1:0,12:12:27.09:548,27,0	1/1:0,12:12:33.11:669,33,0	1/1:1,17:17:41.86:828,42,0	0/0:33,0:30:90.24:0,90,1390	1/1:0,14:13:36.12:720,36,0	1/1:0,16:16:30.10:608,30,0	1/1:0,1:1:3.01:61,3,0
chr10	11397078	.	AAAC	A	1102.69	PASS	AB=0.900;AC=21;AF=0.656;AN=32;BaseQRankSum=3.994;DP=428;FS=0.000;HRun=0;HaplotypeScore=27.4344;InbreedingCoeff=0.5652;MQ=18.59;MQ0=210;MQRankSum=-1.107;QD=8.29;ReadPosRankSum=1.617;VQSLOD=1.4260;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:17:12.04:0,12,199	./.	./.	./.	./.	./.	0/0:19,0:3:3.01:0,3,62	0/0:24,8:6:12.01:0,12,193	1/1:8,3:4:3.01:44,3,0	1/1:4,5:5:15.05:221,15,0	./.	1/1:3,4:4:9.03:132,9,0	1/1:2,7:6:9.03:132,9,0	1/1:6,10:7:9.03:133,9,0	1/1:3,8:6:6.02:88,6,0	1/1:1,4:4:8.77:132,9,0	./.	./.	0/1:24,3:8:51.97:52,0,129	0/0:24,1:17:6.06:0,6,694	1/1:12,1:3:3.01:36,3,0	./.	./.	./.	0/0:31,0:23:45.15:0,45,878	1/1:6,6:5:12.04:177,12,0	1/1:4,9:7:6.02:88,6,0	./.
chr10	11397242	.	GTTA	G	1782.04	PASS	AB=0.872;AC=34;AF=0.680;AN=50;BaseQRankSum=8.146;DP=368;FS=27.676;HRun=0;HaplotypeScore=49.6594;InbreedingCoeff=0.4106;MQ=49.64;MQ0=14;MQRankSum=-0.995;QD=9.14;ReadPosRankSum=0.889;VQSLOD=1.2469;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:27:81.28:0,81,1888	1/1:0,2:2:6.02:94,6,0	0/0:14,0:13:36.04:0,36,679	0/0:19,0:16:48.03:0,48,999	1/1:2,7:9:6.02:94,6,0	0/1:26,3:26:40.85:41,0,49	0/1:10,2:9:13.97:14,0,42	0/0:34,3:22:48.15:0,48,771	./.	1/1:3,5:6:9.03:141,9,0	1/1:0,5:4:6.02:94,6,0	1/1:2,3:4:3.01:47,3,0	1/1:2,2:4:6.02:94,6,0	1/1:1,2:3:6.02:94,6,0	1/1:1,2:2:3.01:47,3,0	1/1:0,4:3:9.03:141,9,0	./.	./.	0/1:28,6:25:10.45:10,0,770	0/1:36,6:38:99:252,0,484	0/0:35,2:29:8.82:0,9,152	1/1:1,4:4:3.01:47,3,0	1/1:1,7:8:18.06:281,18,0	1/1:4,3:3:3.01:47,3,0	0/0:28,0:27:81.22:0,81,1815	1/1:0,7:5:12.04:182,12,0	1/1:2,3:4:6.02:94,6,0	1/1:0,3:3:9.03:141,9,0
chr10	11397813	.	GT	G	1082.87	PASS	AC=10;AF=0.192;AN=52;BaseQRankSum=0.814;DP=348;FS=7.204;HRun=5;HaplotypeScore=51.9021;InbreedingCoeff=0.7707;MQ=36.38;MQ0=19;MQRankSum=1.068;QD=19.34;ReadPosRankSum=-0.151;VQSLOD=2.5863;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:23:45.14:0,45,595	0/0:5,0:5:6.02:0,6,82	0/0:17,0:2:1.07:0,1,38	./.	0/0:18,0:18:8.96:0,9,99	1/1:8,0:5:8.83:54,9,0	./.	1/1:2,14:11:33.09:373,33,0	0/0:6,0:5:15.01:0,15,183	0/0:15,0:14:26.86:0,27,334	0/0:24,0:24:21.03:0,21,258	0/0:7,0:7:8.92:0,9,79	0/0:15,0:14:21.03:0,21,259	0/0:11,0:10:9.03:0,9,122	0/0:16,0:16:11.97:0,12,140	0/0:11,0:11:11.99:0,12,141	0/0:16,0:15:17.96:0,18,181	0/0:8,0:6:9.03:0,9,123	1/1:0,12:12:36.06:378,36,0	1/1:0,12:12:21.06:237,21,0	1/1:0,8:8:18.05:204,18,0	0/0:15,0:15:17.96:0,18,197	0/0:16,0:16:11.98:0,12,133	0/0:12,0:12:3.01:0,3,41	0/0:10,0:10:12.04:0,12,163	0/0:14,0:14:33.06:0,33,400	0/0:13,0:13:17.97:0,18,200	0/0:7,0:7:6.02:0,6,82
chr10	11412175	.	T	TAGGGGTTAACAAGGCCTTCC	1795.24	PASS	AB=0.690;AC=20;AF=0.909;AN=22;BaseQRankSum=-2.634;DP=37;FS=5.528;HRun=0;HaplotypeScore=27.5692;InbreedingCoeff=-0.2244;MQ=136.45;MQ0=0;MQRankSum=-1.380;QD=57.91;ReadPosRankSum=0.042;VQSLOD=0.9718;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/1:3,0:6:30.11:344,0,30	0/1:3,1:5:12.35:491,0,12	./.	./.	./.	./.	1/1:2,0:2:6.02:149,6,0	1/1:3,0:3:6.02:169,6,0	./.	1/1:3,0:3:6.02:150,6,0	./.	./.	./.	1/1:2,0:2:6.02:125,6,0	./.	1/1:1,0:1:2.99:23,3,0	1/1:1,0:1:3.01:50,3,0	1/1:5,0:5:9.02:116,9,0	./.	./.	./.	./.	1/1:1,0:1:3.01:95,3,0	./.	./.	1/1:2,0:2:6.02:169,6,0
chr10	11417801	.	A	AT	13268.84	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-1.973;DP=505;FS=0.956;HRun=8;HaplotypeScore=82.0995;InbreedingCoeff=0.9654;MQ=68.52;MQ0=0;MQRankSum=-2.005;QD=27.08;ReadPosRankSum=1.562;VQSLOD=5.3252;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,25:27:45.57:672,46,0	1/1:3,7:10:21.06:241,21,0	0/0:8,0:8:14.98:0,15,128	0/0:7,0:7:11.90:0,12,98	1/1:4,29:33:84.08:906,84,0	1/1:1,19:20:31.72:423,32,0	1/1:3,19:22:54.16:620,54,0	1/1:6,23:29:59.12:724,59,0	1/1:3,10:13:33.09:376,33,0	1/1:3,19:22:60.07:646,60,0	1/1:4,10:14:30.09:344,30,0	1/1:2,15:18:37.61:486,38,0	1/1:4,10:14:39.08:420,39,0	1/1:1,16:17:45.13:516,45,0	1/1:1,23:24:54.16:619,54,0	1/1:2,17:19:48.14:552,48,0	1/1:1,15:16:39.11:448,39,0	1/1:3,15:18:37.77:507,38,0	1/1:11,8:19:18.43:349,18,0	1/1:3,16:19:48.10:537,48,0	1/1:6,15:21:45.13:511,45,0	1/1:2,7:9:21.06:242,21,0	1/1:1,11:12:27.55:311,28,0	1/1:0,11:11:30.09:344,30,0	1/1:1,16:17:45.12:509,45,0	1/1:2,22:24:66.16:744,66,0	1/1:3,19:22:51.15:586,51,0	1/1:4,16:20:57.14:636,57,0
chr10	11418041	.	G	GA	2051.16	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-9.256;DP=557;FS=3.574;HRun=9;HaplotypeScore=50.9787;InbreedingCoeff=0.9948;MQ=81.20;MQ0=0;MQRankSum=-4.243;QD=23.31;ReadPosRankSum=2.319;VQSLOD=4.5917;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,18:20:51.13:557,51,0	0/0:11,0:11:29.97:0,30,255	0/0:20,0:20:31.44:0,31,323	0/0:12,0:12:22.23:0,22,161	1/1:3,28:32:58:850,58,0	1/1:6,14:20:33.09:365,33,0	1/1:1,15:16:19.32:439,19,0	0/0:30,0:30:77.97:0,78,675	0/0:16,0:17:47.03:0,47,397	0/0:20,0:20:53.98:0,54,469	0/0:15,0:15:38.99:0,39,339	0/0:21,0:21:53.97:0,54,465	0/0:21,0:21:56.99:0,57,495	0/0:17,0:17:50.99:0,51,443	0/0:23,0:23:59.96:0,60,517	0/0:22,0:22:47.95:0,48,417	0/0:23,0:23:53.97:0,54,469	0/0:21,0:21:54.86:0,55,468	0/0:17,0:18:47:0,47,394	0/0:22,0:22:65.99:0,66,573	0/0:14,0:14:35.99:0,36,313	0/0:7,0:7:17.98:0,18,154	0/0:16,0:16:44.99:0,45,391	0/0:21,0:21:62.99:0,63,547	0/0:19,0:19:50.98:0,51,443	0/0:22,0:22:62.98:0,63,547	0/0:31,0:31:80.96:0,81,699	0/0:26,0:26:77.86:0,78,666
chr10	11418406	.	T	TTGTG	4901.23	PASS	AB=0.981;AC=42;AF=0.778;AN=54;BaseQRankSum=3.671;DP=546;FS=24.042;HRun=0;HaplotypeScore=112.3902;InbreedingCoeff=0.0218;MQ=60.90;MQ0=19;MQRankSum=1.132;QD=10.61;ReadPosRankSum=-2.461;VQSLOD=1.7029;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:24:3.01:48,3,0	0/1:6,0:6:25.90:137,0,26	0/0:33,0:14:14.99:0,15,163	0/0:29,0:11:2.92:0,3,40	1/1:34,0:30:14.72:174,15,0	./.	1/1:14,0:12:12.01:191,12,0	1/1:18,0:16:15.81:186,16,0	1/1:20,0:22:19.75:226,20,0	1/1:21,0:19:7.79:95,8,0	0/1:13,0:14:23.59:67,0,24	1/1:12,0:12:11.25:124,11,0	1/1:15,0:16:15.05:240,15,0	1/1:17,0:16:14.26:146,14,0	1/1:16,0:16:20.95:281,21,0	0/1:19,0:20:14.35:326,0,14	0/1:17,0:17:59.68:225,0,60	1/1:14,0:14:6.02:97,6,0	1/1:3,3:6:9.03:193,9,0	1/1:13,13:28:35.07:613,35,0	1/1:14,0:14:18.06:307,18,0	1/1:16,0:16:14.09:125,14,0	0/1:28,0:28:18.63:200,0,19	1/1:17,0:17:21.17:300,21,0	0/1:23,0:22:56.18:56,0,122	0/1:16,0:16:27.59:112,0,28	0/1:27,0:27:45.08:100,0,45	1/1:18,0:18:7.95:332,8,0
chr10	11418430	.	G	GTGTGT	6868.63	PASS	AB=0.763;AC=38;AF=0.679;AN=56;BaseQRankSum=-1.030;DP=566;FS=4.011;HRun=0;HaplotypeScore=96.5155;InbreedingCoeff=-0.1540;MQ=51.61;MQ0=51;MQRankSum=1.931;QD=13.71;ReadPosRankSum=5.856;VQSLOD=3.7105;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:31,0:27:26.87:28,0,27	0/1:1,5:6:17.68:304,0,18	0/0:35,0:10:21.05:0,21,229	0/0:30,0:6:8.98:0,9,105	1/1:31,0:27:0.95:63,1,0	1/1:20,0:17:5.70:31,6,0	1/1:14,0:11:12.01:140,12,0	0/1:19,0:17:65.35:65,0,137	1/1:3,13:19:20.09:446,20,0	1/1:8,11:21:2.64:494,3,0	0/1:6,9:17:10.28:256,0,10	0/1:10,0:9:3.06:12,0,3	1/1:11,0:10:12.82:84,13,0	0/1:17,0:15:2.70:7,0,3	1/1:1,15:20:21.05:545,21,0	0/1:4,19:25:40.50:646,0,41	0/1:6,17:25:44.04:482,0,44	1/1:1,9:14:6.02:187,6,0	1/1:12,0:10:8.61:77,9,0	0/1:25,0:24:99:189,0,145	0/1:7,4:11:19.56:142,0,20	0/1:16,0:16:2.23:7,0,2	0/1:5,17:23:10.64:450,0,11	1/1:5,15:21:26.94:720,27,0	0/1:8,0:19:86.34:94,0,86	1/1:3,9:16:8.02:565,8,0	0/1:4,15:21:26.10:220,0,26	1/1:6,9:15:14.44:613,14,0
chr10	11418433	.	T	TG	1694.65	PASS	AB=0.898;AC=29;AF=0.537;AN=54;BaseQRankSum=7.339;DP=525;FS=5.689;HRun=1;HaplotypeScore=75.2511;InbreedingCoeff=-0.1355;MQ=52.09;MQ0=50;MQRankSum=0.537;QD=4.38;ReadPosRankSum=7.734;VQSLOD=0.4043;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:9,15:20:33.14:33,0,39	0/1:7,0:7:21.19:21,0,28	0/0:34,0:9:21.01:0,21,241	0/0:30,0:5:8.94:0,9,112	1/1:2,22:22:10.82:158,11,0	./.	1/1:0,13:11:11.88:152,12,0	0/1:14,6:18:99:172,0,196	0/1:19,0:19:18.17:27,0,18	0/0:23,0:21:32.88:0,33,304	0/1:19,0:17:4.18:4,0,146	1/1:0,5:12:12.03:152,12,0	0/1:2,3:11:21.66:127,0,22	1/1:1,4:16:15.03:163,15,0	0/1:21,0:19:23.10:30,0,23	0/1:22,0:20:44.70:45,0,57	0/1:28,0:24:26.44:26,0,136	1/1:11,0:11:1.26:14,1,0	0/1:13,0:11:15.15:47,0,15	0/1:21,2:22:99:303,0,205	0/1:6,3:9:44.09:114,0,44	1/1:2,1:18:14.55:145,15,0	0/1:21,0:19:29.68:30,0,45	1/1:20,0:19:18.29:66,18,0	0/0:18,0:15:29.04:0,29,280	0/0:18,0:16:17.79:0,18,250	0/1:18,0:17:6.74:7,0,61	0/1:12,2:14:32.72:33,0,80
chr10	11420353	.	TCTCC	T	3431.70	PASS	AC=40;AF=0.909;AN=44;BaseQRankSum=-1.614;DP=186;FS=25.923;HRun=0;HaplotypeScore=48.0688;InbreedingCoeff=0.4910;MQ=65.60;MQ0=5;MQRankSum=-2.101;QD=24.17;ReadPosRankSum=3.129;VQSLOD=1.1453;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:10:3:26,3,0	1/1:2,2:4:6.02:99,6,0	0/0:16,0:9:8.74:0,9,77	0/0:18,0:7:8.06:0,8,126	1/1:4,0:4:12.03:164,12,0	1/1:10,0:10:20.99:288,21,0	1/1:10,0:10:14.98:216,15,0	1/1:15,3:18:15.05:247,15,0	1/1:4,5:8:18.06:287,18,0	./.	1/1:3,4:7:15.04:215,15,0	1/1:3,2:5:9.03:149,9,0	./.	1/1:1,2:3:6.02:99,6,0	1/1:2,7:9:27.04:413,27,0	1/1:2,3:4:12.04:198,12,0	1/1:5,0:5:2.99:24,3,0	1/1:2,1:3:3.01:50,3,0	1/1:5,1:5:6.01:76,6,0	./.	1/1:8,1:6:6.02:89,6,0	./.	1/1:2,2:4:6.02:99,6,0	./.	1/1:3,5:8:15.05:249,15,0	1/1:3,5:8:15.05:249,15,0	1/1:0,4:4:12.04:195,12,0	./.
chr10	11420383	.	TCTC	T	2423.91	PASS	AB=1.000;AC=35;AF=0.673;AN=52;BaseQRankSum=-4.552;DP=207;FS=2.693;HRun=0;HaplotypeScore=60.4002;InbreedingCoeff=0.4493;MQ=59.84;MQ0=8;MQRankSum=-1.809;QD=25.25;ReadPosRankSum=3.690;VQSLOD=3.0083;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:10:20.54:0,21,142	1/1:0,2:2:6.02:88,6,0	0/0:35,0:9:8.89:0,9,64	0/0:29,0:13:0.94:0,1,225	0/0:7,0:7:1.94:0,2,94	0/0:15,0:15:17.19:0,17,223	0/0:10,0:10:15.38:0,15,81	1/1:3,8:9:18.05:246,18,0	1/1:5,5:8:21.06:290,21,0	1/1:2,1:2:3.01:44,3,0	1/1:3,2:5:9.03:132,9,0	0/1:4,0:4:15.69:23,0,16	0/0:1,0:1:2.96:0,3,19	0/1:3,0:3:20:24,0,20	1/1:1,7:8:24.07:334,24,0	1/1:2,3:4:5.44:127,5,0	1/1:1,3:4:12.04:175,12,0	1/1:0,2:2:6.02:88,6,0	1/1:4,2:4:6.02:88,6,0	1/1:0,1:1:3.01:44,3,0	1/1:3,5:6:15.05:220,15,0	./.	1/1:0,2:2:6.02:88,6,0	1/1:3,1:3:6.02:80,6,0	0/1:6,0:6:19.50:19,0,45	1/1:1,5:6:15.05:221,15,0	1/1:0,6:6:18.06:261,18,0	./.
chr10	11420398	.	CCTA	C	1554.55	PASS	AB=0.959;AC=38;AF=0.731;AN=52;BaseQRankSum=0.668;DP=196;FS=20.797;HRun=0;HaplotypeScore=61.3674;InbreedingCoeff=0.0650;MQ=61.39;MQ0=7;MQRankSum=-1.698;QD=11.96;ReadPosRankSum=2.184;VQSLOD=0.9981;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:11,0:10:6.38:15,0,6	1/1:2,0:2:6:52,6,0	0/0:33,0:6:8.59:0,9,70	0/0:30,0:18:8.25:0,8,277	0/1:7,0:7:3.73:58,0,4	0/1:11,1:12:9.47:50,0,9	1/1:8,0:8:6.30:56,6,0	0/1:12,0:10:63.57:64,0,64	1/1:8,1:8:17.93:164,18,0	1/1:1,0:1:2.90:16,3,0	1/1:5,0:5:9.01:83,9,0	1/1:2,1:3:5.93:67,6,0	0/0:1,0:1:0.47:0,0,1	0/1:2,1:3:1.96:44,0,2	1/1:9,0:9:23.91:201,24,0	1/1:4,0:4:10.24:80,10,0	1/1:4,0:4:11.98:116,12,0	1/1:2,0:2:5.96:43,6,0	0/1:4,0:3:12.08:32,0,12	0/1:2,0:2:10.03:13,0,10	0/1:10,0:8:27.07:94,0,27	./.	1/1:2,0:2:6:52,6,0	1/1:4,0:2:5.94:46,6,0	1/1:3,2:5:3.90:76,4,0	1/1:5,0:5:14.90:115,15,0	1/1:6,0:6:17.99:158,18,0	./.
chr10	11422248	.	ATTTG	A	2831.19	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=9.288;DP=725;FS=3.170;HRun=0;HaplotypeScore=126.4474;InbreedingCoeff=0.9989;MQ=66.89;MQ0=1;MQRankSum=-1.500;QD=30.12;ReadPosRankSum=5.607;VQSLOD=3.5642;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:93.42:0,93,1856	0/0:10,0:10:27.08:0,27,649	0/0:25,0:24:69.21:0,69,1555	0/0:18,0:16:42.08:0,42,865	0/0:36,0:36:99:0,99,2444	0/0:35,0:35:96.16:0,96,2122	0/0:22,0:22:66.21:0,66,1662	0/0:43,0:43:99:0,117,2706	0/0:21,0:21:57.05:0,57,1249	0/0:33,0:33:90.27:0,90,2102	0/0:29,0:28:78.27:0,78,2009	1/1:2,25:27:36.12:658,36,0	1/1:2,16:18:27.09:489,27,0	1/1:0,27:28:63.22:1158,63,0	0/0:35,0:35:99:0,99,2191	0/0:21,0:21:63.05:0,63,1328	0/0:19,0:18:48.15:0,48,1212	0/0:11,0:11:26.98:0,27,600	0/0:23,0:23:60.20:0,60,1457	0/0:39,0:39:99:0,111,2706	0/0:30,0:30:87.24:0,87,2104	1/1:0,21:21:39.13:687,39,0	0/0:18,0:18:54.19:0,54,1380	0/0:23,0:23:54.67:0,55,1462	0/0:27,0:27:75.06:0,75,1765	0/0:42,0:41:99:0,117,2642	0/0:26,0:26:63.14:0,63,1433	0/0:11,0:11:30.57:0,31,758
chr10	11422414	.	C	CGT	1298.01	PASS	AB=0.622;AC=7;AF=0.125;AN=56;BaseQRankSum=-2.362;DP=698;FS=4.937;HRun=0;HaplotypeScore=158.9547;InbreedingCoeff=0.6749;MQ=54.64;MQ0=11;MQRankSum=1.927;QD=9.91;ReadPosRankSum=-0.412;VQSLOD=3.2524;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,32:45:23.94:352,24,0	0/0:8,0:8:12.03:0,12,137	0/0:34,0:20:30.59:0,31,356	0/0:47,0:21:13.62:0,14,108	0/1:9,14:21:29.31:476,0,29	1/1:9,19:28:21.07:349,21,0	1/1:12,23:35:23.51:267,24,0	0/0:38,0:38:69.22:0,69,861	0/0:27,0:27:23.99:0,24,262	0/0:23,0:23:57.17:0,57,686	0/0:7,0:7:9.02:0,9,101	0/0:30,0:27:8.92:0,9,393	0/0:29,0:24:1.82:0,2,353	0/0:21,0:20:9.29:0,9,104	0/0:34,0:34:59.71:0,60,629	0/0:20,0:20:24.03:0,24,264	0/0:19,0:18:33.46:0,33,398	0/0:14,0:14:29.11:0,29,343	0/0:19,0:18:36.06:0,36,395	0/0:22,0:21:23.63:0,24,235	0/0:46,0:46:35.85:0,36,428	0/0:23,0:23:27.02:0,27,270	0/0:18,0:17:5.49:0,5,75	0/0:28,0:28:23.27:0,23,238	0/0:15,0:15:24.07:0,24,291	0/0:21,0:21:48.11:0,48,553	0/0:21,0:21:48.14:0,48,575	0/0:3,0:3:6.02:0,6,73
chr10	11422427	.	TTGTGTGTG	T	4282.55	PASS	AB=0.864;AC=25;AF=0.446;AN=56;BaseQRankSum=-2.476;DP=713;FS=1.733;HRun=0;HaplotypeScore=201.9633;InbreedingCoeff=0.6610;MQ=47.06;MQ0=19;MQRankSum=-6.344;QD=14.77;ReadPosRankSum=-2.606;VQSLOD=3.6823;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:30.95:0,31,982	1/1:2,3:5:7.84:122,8,0	0/0:41,0:14:2.80:0,3,13	0/0:58,0:11:4.83:0,5,45	0/0:23,0:21:27.09:0,27,1009	0/0:28,0:28:30.10:0,30,1019	0/0:34,0:34:33.58:0,34,1118	1/1:15,15:30:42.70:543,43,0	1/1:8,12:21:8.52:117,9,0	1/1:11,11:22:31.91:734,32,0	0/1:8,3:9:0:0,0,1	0/0:23,0:26:32.66:0,33,770	0/0:23,0:26:53.67:0,54,1363	0/0:13,0:19:21.07:0,21,703	1/1:22,12:34:7.87:124,8,0	1/1:9,9:18:16.95:176,17,0	0/1:18,1:17:41.87:108,0,42	0/1:15,3:18:48.97:171,0,49	1/1:11,9:17:26.23:581,26,0	0/0:8,14:21:1.36:0,1,3	1/1:18,22:40:2.22:19,2,0	0/0:14,0:24:27.55:0,28,797	0/0:4,13:15:0.94:0,1,2	0/0:14,18:33:4.89:0,5,43	0/0:12,0:13:14.86:0,15,606	1/1:21,8:27:38.99:836,39,0	1/1:12,6:19:29.88:577,30,0	1/1:3,1:4:11.96:174,12,0
chr10	11422622	.	ACTTT	A	2765.70	PASS	AB=1.000;AC=12;AF=0.214;AN=56;BaseQRankSum=7.935;DP=780;FS=1.280;HRun=0;HaplotypeScore=149.8420;InbreedingCoeff=0.5734;MQ=65.46;MQ0=1;MQRankSum=1.608;QD=11.11;ReadPosRankSum=1.260;VQSLOD=3.4386;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:41,0:41:99:244,0,375	0/0:11,0:11:32.99:0,33,455	0/0:28,0:22:36.05:0,36,570	0/0:21,0:21:36.95:0,37,572	0/1:45,0:44:99:197,0,496	0/1:32,0:32:99:183,0,209	0/1:19,0:19:58.48:58,0,187	0/0:45,0:45:99:0,126,1649	0/0:26,0:26:63.02:0,63,855	0/0:34,0:33:99:0,99,1588	0/0:16,0:16:48.08:0,48,715	1/1:2,23:25:23.98:440,24,0	1/1:3,35:38:36.10:661,36,0	1/1:0,25:25:27.09:495,27,0	0/0:42,0:42:99:0,99,1480	0/0:24,0:24:60.11:0,60,966	0/0:30,0:30:87.20:0,87,1812	0/0:11,0:11:21.03:0,21,280	0/0:23,0:22:50.98:0,51,614	0/0:40,0:40:99:0,109,1465	0/0:39,0:39:99:0,102,1502	1/1:1,23:24:59.28:664,59,0	0/0:22,0:22:66.12:0,66,1270	0/0:27,0:27:78.03:0,78,1343	0/0:30,0:30:84.21:0,84,1742	0/0:30,0:28:75.03:0,75,1041	0/0:19,0:15:27.03:0,27,327	0/0:13,0:12:20.97:0,21,241
chr10	11422628	.	T	TTTCA	8176.37	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-11.579;DP=791;FS=9.963;HRun=0;HaplotypeScore=133.6504;InbreedingCoeff=0.8951;MQ=64.56;MQ0=2;MQRankSum=-1.277;QD=21.35;ReadPosRankSum=-0.790;VQSLOD=4.1044;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:42:48.05:0,48,447	1/1:6,7:13:18.06:405,18,0	0/0:26,0:19:3.01:0,3,31	0/0:21,0:20:3:0,3,25	0/0:24,0:40:42.05:0,42,391	0/0:11,0:32:36.02:0,36,330	0/0:9,0:18:15.02:0,15,140	1/1:46,0:45:26.94:258,27,0	1/1:11,15:26:27.09:636,27,0	1/1:19,17:36:10.35:1059,10,0	1/1:8,9:17:27.01:584,27,0	0/0:23,0:23:24.04:0,24,236	0/0:35,0:35:35.94:0,36,355	0/0:25,0:25:27.05:0,27,266	1/1:17,25:42:48.16:1132,48,0	1/1:9,16:27:33.11:779,33,0	0/0:34,0:34:69.14:0,69,1005	1/1:6,5:12:8.86:155,9,0	1/1:13,8:20:20.94:439,21,0	1/1:20,16:37:48.10:1040,48,0	1/1:19,18:37:42.14:992,42,0	0/0:25,0:25:33.01:0,33,308	0/0:24,0:24:37.35:0,37,582	0/0:29,0:29:45.13:0,45,660	0/0:33,0:33:66.18:0,66,946	1/1:18,2:29:30.10:542,30,0	1/1:12,3:23:3.01:52,3,0	1/1:6,1:8:6.02:104,6,0
chr10	11422629	.	TTC	T	122.41	PASS	AB=0.962;AC=6;AF=0.107;AN=56;BaseQRankSum=11.200;DP=795;FS=0.000;HRun=0;HaplotypeScore=132.8521;InbreedingCoeff=0.4111;MQ=64.45;MQ0=3;MQRankSum=0.071;QD=0.91;ReadPosRankSum=3.579;VQSLOD=2.2062;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:42:43.95:0,44,849	0/0:13,0:13:39.13:0,39,587	0/1:25,2:20:4.68:5,0,713	0/1:20,2:20:99:105,0,628	0/0:41,0:40:60.71:0,61,1062	0/0:32,0:32:22.92:0,23,488	0/0:18,0:18:19.98:0,20,360	0/0:45,0:44:99:0,129,2146	0/0:26,0:26:60.20:0,60,881	0/0:37,0:36:99:0,108,1692	0/0:17,0:17:51.17:0,51,774	0/1:24,0:24:5.78:30,0,6	1/1:35,0:35:24.44:75,24,0	0/1:26,0:26:3.43:34,0,3	0/0:42,0:42:93.30:0,93,1365	0/0:27,0:27:57.19:0,57,843	0/0:34,0:34:99:0,99,1834	0/0:12,0:12:24.08:0,24,367	0/0:21,0:20:54.17:0,54,782	0/0:37,0:37:99:0,104,1579	0/0:37,0:37:93.30:0,93,1392	0/0:25,0:25:12:0,12,431	0/0:24,0:24:72.23:0,72,1297	0/0:30,0:30:90.29:0,90,1563	0/0:33,0:33:99:0,99,1818	0/0:30,0:28:81.24:0,81,1175	0/0:28,0:23:30.10:0,30,479	0/0:9,0:8:21.07:0,21,313
chr10	11425784	.	A	AT	13897.23	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-3.018;DP=581;FS=0.793;HRun=9;HaplotypeScore=71.2888;InbreedingCoeff=0.9845;MQ=79.67;MQ0=1;MQRankSum=-4.758;QD=25.59;ReadPosRankSum=4.365;VQSLOD=5.2080;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,18:20:42.11:462,42,0	1/1:0,8:8:21.06:232,21,0	0/0:25,0:24:32.88:0,33,275	0/0:13,0:13:15.99:0,16,180	1/1:7,17:24:24.92:473,25,0	1/1:5,30:35:75.20:830,75,0	1/1:1,18:19:45.12:498,45,0	1/1:4,27:30:55.14:826,55,0	1/1:1,14:15:36.98:400,37,0	1/1:2,15:17:48.12:525,48,0	1/1:1,11:12:26.99:272,27,0	1/1:2,22:24:50.78:564,51,0	1/1:3,24:27:63.12:683,63,0	1/1:0,20:20:51.14:564,51,0	1/1:1,18:20:56.99:612,57,0	1/1:1,25:26:51.14:564,51,0	1/1:6,28:34:55.17:837,55,0	1/1:1,9:10:18.05:199,18,0	1/1:1,16:17:48.13:531,48,0	1/1:2,22:24:60.04:623,60,0	1/1:1,17:18:45.12:498,45,0	1/1:0,18:18:45.12:498,45,0	1/1:2,14:16:33.09:365,33,0	1/1:2,16:18:45.12:498,45,0	1/1:2,22:23:57.01:630,57,0	1/1:5,23:28:63.16:689,63,0	1/1:3,19:22:24.92:505,25,0	1/1:0,15:16:48.11:520,48,0
chr10	11426745	.	T	TA	3874.50	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-5.903;DP=480;FS=4.174;HRun=9;HaplotypeScore=59.3672;InbreedingCoeff=0.9905;MQ=79.55;MQ0=1;MQRankSum=-0.977;QD=24.84;ReadPosRankSum=1.010;VQSLOD=4.5578;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,33:39:58.01:851,58,0	0/0:12,0:12:35.99:0,36,312	0/0:18,0:16:32.84:0,33,267	0/0:13,0:12:19.55:0,20,146	1/1:2,15:17:45.01:469,45,0	1/1:1,17:18:45.12:498,45,0	1/1:2,11:13:27.07:299,27,0	0/0:24,0:24:38.56:0,39,377	0/0:10,0:10:26.99:0,27,234	0/0:22,0:22:56.96:0,57,492	0/0:12,0:12:26.99:0,27,234	1/1:0,14:14:36.10:398,36,0	1/1:5,11:16:26.90:298,27,0	1/1:1,9:10:27.07:299,27,0	0/0:12,0:12:32.99:0,33,286	0/0:17,0:17:44.98:0,45,391	0/0:37,0:37:99:0,108,934	0/0:21,0:21:59.89:0,60,503	0/0:23,0:24:55.96:0,56,468	0/0:29,0:29:74.95:0,75,645	0/0:6,0:6:15:0,15,130	1/1:0,11:11:32.92:332,33,0	0/0:12,0:12:29.98:0,30,257	0/0:13,0:13:26.98:0,27,234	1/1:1,17:18:39.11:431,39,0	0/0:19,0:19:47.97:0,48,416	0/0:19,0:19:47.97:0,48,414	0/0:4,0:4:12:0,12,104
chr10	11428626	.	C	CTTGGT	15374.54	PASS	AB=0.679;AC=51;AF=0.911;AN=56;BaseQRankSum=3.175;DP=640;FS=0.907;HRun=0;HaplotypeScore=251.7925;InbreedingCoeff=0.6962;MQ=63.77;MQ0=4;MQRankSum=-5.425;QD=26.65;ReadPosRankSum=3.818;VQSLOD=4.5631;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:26:38.96:589,39,0	1/1:9,0:9:17.98:257,18,0	0/0:34,0:30:19.26:0,19,296	0/0:28,0:21:24.56:0,25,373	1/1:23,0:23:33.61:353,34,0	1/1:27,0:27:50.80:605,51,0	1/1:19,0:19:39:550,39,0	1/1:32,0:30:45.51:724,46,0	1/1:20,0:20:45.02:650,45,0	1/1:18,0:18:21.07:322,21,0	1/1:18,0:18:33.09:514,33,0	1/1:7,18:26:54.07:1526,54,0	1/1:8,11:20:30.57:838,31,0	0/1:10,7:19:22.97:733,0,23	1/1:39,0:39:77.76:1058,78,0	1/1:30,0:30:72.04:1005,72,0	1/1:19,0:18:41.78:569,42,0	1/1:24,0:24:5.62:515,6,0	1/1:26,0:24:39.08:598,39,0	1/1:16,0:16:29.84:395,30,0	1/1:14,0:14:9.03:178,9,0	1/1:8,10:19:27.05:700,27,0	1/1:21,0:19:26.47:295,26,0	1/1:19,0:18:18.51:209,19,0	1/1:11,0:15:12.04:265,12,0	1/1:32,0:30:63.14:877,63,0	1/1:32,0:32:68.84:890,69,0	1/1:14,0:14:12.03:159,12,0
chr10	11428658	.	T	TG	2358.22	PASS	AB=0.777;AC=19;AF=0.339;AN=56;BaseQRankSum=9.038;DP=625;FS=9.513;HRun=1;HaplotypeScore=109.0043;InbreedingCoeff=-0.5388;MQ=71.03;MQ0=5;MQRankSum=-8.345;QD=5.56;ReadPosRankSum=-1.331;VQSLOD=-0.6403;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:24,5:29:85.87:86,0,718	0/1:4,3:7:79.57:80,0,134	0/0:37,0:29:69.68:0,70,854	0/0:34,0:26:44.68:0,45,585	0/1:11,5:16:59.21:59,0,288	0/1:17,5:22:99:118,0,439	0/1:16,7:23:99:201,0,464	0/1:26,7:31:99:175,0,762	0/1:10,9:19:99:210,0,266	0/1:11,4:15:99:123,0,382	0/1:16,3:19:34.78:35,0,460	0/0:28,0:28:47.52:0,48,614	0/0:16,0:16:41.64:0,42,371	0/0:18,0:18:41.77:0,42,386	0/1:21,11:32:99:147,0,632	0/1:21,8:29:99:196,0,655	0/1:20,5:24:4.44:4,0,540	0/1:17,5:22:99:158,0,325	0/1:27,5:31:99:151,0,763	0/1:11,4:15:42.99:43,0,382	0/1:14,2:16:18.34:18,0,406	0/0:15,0:15:38.84:0,39,373	0/0:16,3:17:0.03:0,0,411	0/0:20,3:22:1.99:0,2,458	0/0:11,0:11:32.73:0,33,377	0/1:18,12:28:99:308,0,462	0/1:18,11:30:99:281,0,571	0/1:2,8:10:62.65:119,0,63
chr10	11429485	.	GC	G	552.99	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=0.156;DP=604;FS=1.819;HRun=4;HaplotypeScore=82.0789;InbreedingCoeff=0.9047;MQ=87.92;MQ0=0;MQRankSum=-2.810;QD=27.65;ReadPosRankSum=0.182;VQSLOD=2.9460;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:87.28:0,87,1199	0/0:12,0:12:30.10:0,30,420	0/0:22,0:22:59.38:0,59,854	0/0:21,0:21:36.16:0,36,627	0/0:27,0:27:78.24:0,78,1078	0/0:22,0:22:66.21:0,66,909	0/0:25,0:25:75.14:0,75,972	0/0:25,0:25:72.23:0,72,994	0/0:24,0:24:69.23:0,69,963	0/0:22,0:22:66.22:0,66,913	0/0:18,0:18:51.16:0,51,714	0/0:15,0:15:45.15:0,45,630	0/0:13,0:13:39.13:0,39,542	0/0:19,0:19:57.12:0,57,768	0/0:24,0:24:69.21:0,69,932	0/0:29,0:29:87.29:0,87,1211	0/0:27,0:27:78.25:0,78,1074	0/0:13,0:13:39.12:0,39,529	0/0:20,0:20:57.18:0,57,783	0/0:24,0:23:66.21:0,66,906	0/0:15,0:15:45.15:0,45,629	0/0:22,0:22:66.22:0,66,924	0/0:21,0:21:60.20:0,60,827	0/0:23,0:23:69.23:0,69,964	1/1:1,19:20:54.17:648,54,0	0/0:27,1:28:45.25:0,45,1038	0/0:40,0:40:99:0,114,1579	0/0:2,0:2:6.02:0,6,84
chr10	11430175	.	T	TTGC	6880.60	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=12.702;DP=501;FS=2.573;HRun=0;HaplotypeScore=104.9883;InbreedingCoeff=0.9318;MQ=43.24;MQ0=114;MQRankSum=-11.141;QD=49.86;ReadPosRankSum=4.523;VQSLOD=7.1307;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:27:30.10:0,30,557	1/1:2,8:10:30.09:611,30,0	0/0:19,0:2:1.55:0,2,4	0/0:18,0:3:3.01:0,3,48	0/0:16,0:15:14.36:0,14,275	0/0:24,0:19:33.11:0,33,615	0/0:34,0:26:27.09:0,27,503	0/0:28,0:19:57.15:0,57,973	1/1:4,6:7:18.06:408,18,0	1/1:0,11:10:30.10:704,30,0	1/1:1,9:9:26.51:511,27,0	0/0:27,0:21:33.11:0,33,614	0/0:24,0:18:24:0,24,446	0/0:21,0:19:30.04:0,30,548	1/1:4,10:10:30.06:634,30,0	1/1:4,4:6:15.01:299,15,0	1/1:3,6:6:18.06:419,18,0	1/1:5,4:6:18.03:354,18,0	0/0:19,0:13:36.12:0,36,640	0/0:19,0:19:42.60:0,43,752	0/0:40,0:31:63.20:0,63,1138	0/0:9,0:9:9.03:0,9,168	1/1:1,7:9:26.51:487,27,0	1/1:8,9:12:25.02:530,25,0	0/0:26,0:25:48.11:0,48,854	1/1:1,17:17:51.16:1165,51,0	1/1:1,7:7:21.03:446,21,0	1/1:1,4:5:15.04:313,15,0
chr10	11430177	.	C	CG	2395.90	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=12.815;DP=484;FS=9.648;HRun=0;HaplotypeScore=106.4241;InbreedingCoeff=0.9166;MQ=41.09;MQ0=118;MQRankSum=-11.584;QD=18.29;ReadPosRankSum=7.244;VQSLOD=5.5880;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:26:30.10:0,30,411	1/1:0,8:8:23.99:216,24,0	0/0:20,0:2:5.99:0,6,61	0/0:18,0:2:2.98:0,3,22	0/0:15,0:14:12.35:0,12,187	0/0:24,0:18:33.11:0,33,448	0/0:34,0:26:27.09:0,27,377	0/0:27,0:17:51.15:0,51,681	1/1:4,6:7:17.95:161,18,0	1/1:0,11:10:30.03:291,30,0	1/1:1,9:9:13.10:174,13,0	0/0:25,0:19:33.11:0,33,461	0/0:25,0:18:24.07:0,24,319	0/0:19,0:17:26.80:0,27,377	1/1:4,9:10:26.97:248,27,0	1/1:3,4:5:12.01:115,12,0	1/1:3,6:6:17.99:163,18,0	1/1:3,4:4:12.03:128,12,0	0/0:19,0:13:33.10:0,33,445	0/0:18,0:18:38.95:0,39,541	0/0:39,0:30:60.20:0,60,832	0/0:9,0:9:9.03:0,9,126	1/1:1,8:9:7.08:154,7,0	1/1:7,9:11:20.61:192,21,0	0/0:23,0:22:41.73:0,42,572	1/1:0,17:16:48.09:483,48,0	1/1:2,6:8:17.55:177,18,0	1/1:0,4:4:12.02:118,12,0
chr10	11430178	.	T	TGGAGAG	12525.56	PASS	AC=26;AF=0.481;AN=54;BaseQRankSum=12.792;DP=522;FS=0.567;HRun=0;HaplotypeScore=128.0254;InbreedingCoeff=0.9544;MQ=40.10;MQ0=120;MQRankSum=-12.705;QD=71.99;ReadPosRankSum=3.797;VQSLOD=5.7863;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:26:21.07:0,21,475	1/1:4,8:12:36.12:1144,36,0	0/0:20,0:2:5.05:0,5,71	./.	0/0:15,0:14:9:0,9,216	0/0:24,0:18:27.09:0,27,617	0/0:34,0:26:27.07:0,27,570	0/0:25,0:16:45.15:0,45,1082	1/1:7,6:10:27.09:870,27,0	1/1:9,10:18:54.19:1620,54,0	1/1:4,9:12:29.13:872,29,0	0/0:26,0:20:33.11:0,33,713	0/0:24,0:17:24.04:0,24,523	0/0:18,0:16:26.53:0,27,616	1/1:12,9:17:45.15:1368,45,0	1/1:2,4:4:12.04:385,12,0	1/1:4,6:7:21.07:659,21,0	1/1:4,4:5:15.05:483,15,0	0/0:18,0:12:33.11:0,33,785	0/0:18,0:18:33.52:0,34,730	0/0:39,0:29:54.19:0,54,1212	0/0:8,0:8:9.03:0,9,216	1/1:5,8:13:29.08:815,29,0	1/1:9,9:13:29.72:959,30,0	0/0:23,0:22:35.24:0,35,823	1/1:6,17:22:63.22:2016,63,0	1/1:6,6:11:26.99:863,27,0	1/1:1,4:5:15.05:473,15,0
chr10	11431191	.	A	AT	225.68	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-1.559;DP=514;FS=1.080;HRun=10;HaplotypeScore=59.1769;InbreedingCoeff=0.8031;MQ=76.18;MQ0=0;MQRankSum=0.343;QD=18.81;ReadPosRankSum=0.407;VQSLOD=4.2954;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:33:85.88:0,86,691	0/0:8,0:8:20.97:0,21,172	0/0:11,0:12:8.94:0,9,74	0/0:19,0:19:26.23:0,26,191	0/0:21,0:21:47.91:0,48,391	0/0:16,0:16:44.88:0,45,359	0/0:20,0:20:44.88:0,45,366	0/0:28,0:30:67.81:0,68,533	0/0:17,0:17:47.93:0,48,394	0/0:24,0:24:56.83:0,57,458	0/0:12,0:12:26.94:0,27,221	0/0:16,0:16:32.90:0,33,269	0/0:24,0:24:34.89:0,35,443	0/0:15,0:15:44.91:0,45,364	0/0:23,0:23:56.88:0,57,462	0/0:18,0:18:44.92:0,45,366	0/0:20,0:20:56.81:0,57,459	0/0:20,1:21:16.21:0,16,338	0/0:22,0:22:59.89:0,60,486	0/0:28,0:28:45.67:0,46,568	0/0:25,0:25:74.89:0,75,613	0/0:5,0:5:11.98:0,12,99	0/0:15,1:16:12.62:0,13,295	0/0:13,0:13:38.96:0,39,320	1/1:2,10:12:30.08:320,30,0	0/0:21,0:21:47.89:0,48,392	0/0:20,0:21:52.97:0,53,425	0/0:2,0:2:5.99:0,6,49
chr10	11433094	.	GTGGTT	G	2103.99	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=11.343;DP=618;FS=13.174;HRun=0;HaplotypeScore=131.3138;InbreedingCoeff=0.9847;MQ=47.88;MQ0=38;MQRankSum=-9.959;QD=35.07;ReadPosRankSum=3.824;VQSLOD=2.7042;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:53:99:0,126,3809	0/0:11,0:11:27.09:0,27,737	0/0:5,0:5:15.01:0,15,297	0/0:12,0:7:15.02:0,15,352	0/0:26,0:25:63.13:0,63,1727	0/0:17,0:17:45.11:0,45,1320	0/0:27,0:27:75.17:0,75,1924	0/0:31,0:26:78.23:0,78,2354	0/0:26,0:26:63.09:0,63,2081	0/0:19,0:19:57.20:0,57,1894	0/0:20,0:20:54.19:0,54,1783	1/1:1,17:16:39.13:605,39,0	1/1:0,15:15:42.14:669,42,0	1/1:2,12:12:20.54:510,21,0	0/0:20,0:20:54.19:0,54,1747	0/0:17,0:17:48.05:0,48,1598	0/0:41,0:34:87.30:0,87,2846	0/0:32,0:26:66.23:0,66,2009	0/0:16,0:13:35.79:0,36,1203	0/0:14,0:14:35.99:0,36,791	0/0:35,0:32:87.30:0,87,2780	1/1:1,12:13:29.90:479,30,0	0/0:12,0:12:27.01:0,27,739	0/0:50,0:43:93.23:0,93,2883	0/0:13,0:13:39.13:0,39,1252	0/0:23,0:23:66.23:0,66,2090	0/0:25,0:23:72.20:0,72,2312	0/0:8,0:7:15.05:0,15,500
chr10	11433100	.	AAGAGCACT	A	3126.71	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=11.182;DP=600;FS=11.611;HRun=0;HaplotypeScore=149.3208;InbreedingCoeff=0.9511;MQ=45.48;MQ0=43;MQRankSum=-9.631;QD=53.00;ReadPosRankSum=3.364;VQSLOD=3.2016;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:49:99:0,111,4361	0/0:10,0:10:27.09:0,27,1108	0/0:2,0:2:6.01:0,6,152	0/0:10,0:5:9.03:0,9,339	0/0:25,0:24:54.19:0,54,2171	0/0:16,0:16:42.10:0,42,1704	0/0:25,0:24:69.22:0,69,2941	0/0:25,0:20:60.19:0,60,2325	0/0:27,0:27:63.13:0,63,2752	0/0:20,0:20:60.21:0,60,2584	0/0:20,0:20:51.17:0,51,2224	1/1:1,17:16:38.22:877,38,0	1/1:0,15:15:42.14:964,42,0	1/1:2,12:12:33.11:757,33,0	0/0:20,0:20:54.19:0,54,2331	0/0:19,0:19:48.07:0,48,1885	0/0:43,0:36:84.29:0,84,3713	0/0:31,0:23:57.18:0,57,2248	0/0:16,0:13:35.68:0,36,1510	0/0:12,0:12:33.11:0,33,1246	0/0:39,0:33:84.27:0,84,3638	1/1:0,12:12:30.10:690,30,0	0/0:12,0:12:30.09:0,30,1036	0/0:45,0:38:78.27:0,78,3422	0/0:12,0:12:36.12:0,36,1444	0/0:23,0:23:66.20:0,66,2819	0/0:25,0:23:72.25:0,72,3102	0/0:10,0:9:15.05:0,15,694
chr10	11433246	.	TAA	T	4045.18	PASS	AB=0.607;AC=36;AF=0.643;AN=56;BaseQRankSum=-5.254;DP=511;FS=2.929;HRun=16;HaplotypeScore=63.7949;InbreedingCoeff=0.7720;MQ=56.04;MQ0=13;MQRankSum=2.853;QD=11.11;ReadPosRankSum=4.184;VQSLOD=2.6163;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,19:27:38.76:325,39,0	1/1:2,1:6:11.43:70,11,0	0/0:24,0:8:17.40:0,17,143	0/0:13,0:5:12:0,12,105	1/1:6,14:22:28.50:277,28,0	1/1:6,12:19:9.62:181,10,0	1/1:6,8:15:17.80:192,18,0	0/1:9,1:19:45.29:45,0,67	1/1:4,12:17:20.87:217,21,0	1/1:5,14:19:32.45:317,32,0	1/1:4,11:18:5.71:175,6,0	0/0:6,0:18:21.66:0,22,163	0/0:7,0:19:17.97:0,18,161	0/0:8,0:12:24.01:0,24,262	1/1:4,15:20:31.91:257,32,0	1/1:5,11:20:29.21:257,29,0	1/1:3,16:22:44.11:336,44,0	1/1:8,11:21:17.66:179,18,0	0/0:10,0:15:11.66:0,12,94	0/0:14,0:26:30.16:0,30,217	0/0:3,0:6:9.49:0,9,34	0/0:5,0:7:13.85:0,14,157	1/1:8,12:21:23.48:186,23,0	1/1:1,9:10:17.96:151,18,0	0/1:4,2:15:23.96:24,0,84	1/1:9,23:33:62.02:495,62,0	1/1:12,17:29:30.76:310,31,0	1/1:4,2:6:5.91:50,6,0
chr10	11434320	.	GT	G	1024.18	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=-4.543;DP=508;FS=1.131;HRun=12;HaplotypeScore=95.2261;InbreedingCoeff=0.8855;MQ=76.03;MQ0=0;MQRankSum=-1.097;QD=12.49;ReadPosRankSum=0.586;VQSLOD=3.6303;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:82.42:0,82,406	0/0:12,0:12:28.75:0,29,151	0/0:18,1:17:6.14:0,6,173	0/1:14,0:12:0.75:1,0,25	0/0:15,0:15:37:0,37,184	0/0:17,0:17:31.57:0,32,177	0/0:14,0:14:31.25:0,31,154	0/0:12,0:24:46.82:0,47,290	0/0:14,0:14:31.12:0,31,157	0/0:19,0:19:37.52:0,38,209	0/0:14,0:14:34.56:0,35,194	1/1:5,11:17:34.87:261,35,0	1/1:3,15:18:44.79:344,45,0	1/1:2,10:12:26.90:209,27,0	0/0:14,0:14:34.75:0,35,206	0/0:14,0:14:28.87:0,29,160	0/0:34,0:34:77.97:0,78,434	0/0:28,0:28:63.25:0,63,331	0/0:7,0:21:42.94:0,43,247	0/0:3,0:12:22.85:0,23,120	0/0:4,0:12:25.96:0,26,148	1/1:4,17:21:47.78:369,48,0	0/0:8,0:8:14.34:0,14,75	0/0:22,0:22:46:0,46,241	0/0:4,0:17:34.25:0,34,188	0/0:27,0:26:63.31:0,63,342	0/0:22,0:22:53.57:0,54,276	0/0:4,0:4:11.68:0,12,71
chr10	11434332	.	T	TA	8331.51	PASS	AB=1.000;AC=37;AF=0.661;AN=56;BaseQRankSum=-8.645;DP=491;FS=1.392;HRun=2;HaplotypeScore=69.7405;InbreedingCoeff=0.6812;MQ=78.28;MQ0=0;MQRankSum=-2.979;QD=23.02;ReadPosRankSum=4.233;VQSLOD=4.7304;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,2:42:86.78:701,87,0	1/1:0,11:11:33.06:407,33,0	0/0:19,0:16:5.92:0,6,148	0/1:16,0:15:36.84:40,0,37	1/1:0,1:18:53.74:433,54,0	1/1:1,1:14:26.96:231,27,0	1/1:0,0:14:32.91:259,33,0	0/0:19,0:20:8.10:0,8,196	1/1:2,14:16:29.06:353,29,0	1/1:2,10:13:35.33:439,35,0	1/1:4,8:14:36.54:410,37,0	0/0:14,0:14:41.27:0,41,257	0/0:17,0:17:47.14:0,47,295	0/0:12,0:12:32.48:0,32,211	1/1:1,13:14:30.10:387,30,0	1/1:1,12:13:27.09:349,27,0	1/1:3,28:31:72.23:928,72,0	1/1:1,24:25:63.68:814,64,0	0/1:23,0:23:12.11:12,0,191	0/0:12,0:12:0.44:0,0,65	0/1:12,0:12:2.48:2,0,78	0/0:18,0:18:48.34:0,48,291	1/1:1,7:8:18.49:215,18,0	1/1:0,20:20:48.16:619,48,0	0/0:17,0:17:3:0,3,121	1/1:1,26:26:78.18:931,78,0	1/1:1,25:26:57.16:725,57,0	1/1:4,0:4:6.01:76,6,0
chr10	11434510	.	C	CGG	959.99	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=5.488;DP=621;FS=2.736;HRun=7;HaplotypeScore=115.6895;InbreedingCoeff=0.9992;MQ=90.16;MQ0=0;MQRankSum=-0.557;QD=10.32;ReadPosRankSum=2.021;VQSLOD=0.2244;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,108,1248	0/0:9,0:9:27.08:0,27,315	0/0:24,0:24:54.11:0,54,627	0/0:27,0:27:60.04:0,60,670	0/0:25,0:25:72.21:0,72,837	0/0:16,0:16:42.11:0,42,479	0/0:30,0:30:81.22:0,81,932	0/0:32,0:32:81.21:0,81,933	0/0:21,0:21:51.13:0,51,592	0/0:18,0:18:45.12:0,45,524	0/0:16,0:16:45.13:0,45,524	1/1:3,0:18:32.27:114,32,0	1/1:3,0:29:64.59:228,65,0	1/1:0,0:13:27.45:97,27,0	0/0:26,0:26:54.14:0,54,629	0/0:18,0:18:45.13:0,45,524	0/0:24,0:24:69.20:0,69,804	0/0:25,0:25:66.18:0,66,769	0/0:21,0:21:48.11:0,48,545	0/0:16,0:16:39.10:0,39,453	0/0:38,0:38:96.27:0,96,1117	1/1:2,0:15:29.94:106,30,0	0/0:17,0:17:39.09:0,39,454	0/0:25,0:25:66.15:0,66,754	1/1:1,17:18:36.12:591,36,0	0/0:22,0:22:54.15:0,54,629	0/0:25,0:25:66.18:0,66,769	0/0:12,0:12:36.11:0,36,419
chr10	11435754	.	TGGG	T	12002.42	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-1.357;DP=513;FS=28.764;HRun=12;HaplotypeScore=123.1996;InbreedingCoeff=0.8013;MQ=69.78;MQ0=0;MQRankSum=-3.124;QD=25.01;ReadPosRankSum=4.674;VQSLOD=1.6371;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,22:28:61.53:761,62,0	1/1:2,7:9:18.04:227,18,0	0/0:10,0:9:5.40:0,5,85	0/0:11,0:11:10.64:0,11,239	1/1:2,18:20:39.09:492,39,0	1/1:5,19:24:48.60:607,49,0	1/1:1,15:17:39.95:472,40,0	1/1:8,2:17:21.72:139,22,0	1/1:0,14:14:33.94:418,34,0	1/1:4,17:21:51.13:631,51,0	1/1:3,19:22:51.16:643,51,0	1/1:3,22:25:60.64:758,61,0	1/1:4,16:20:45.13:568,45,0	1/1:0,23:24:65.42:803,65,0	1/1:3,18:21:51.15:644,51,0	1/1:1,11:13:35.94:430,36,0	1/1:3,27:31:80.51:1001,81,0	1/1:4,13:17:34.03:418,34,0	1/1:2,0:10:15.09:77,15,0	1/1:4,0:19:30.79:148,31,0	1/1:7,0:42:68.74:343,69,0	1/1:2,13:16:33.08:417,33,0	1/1:2,13:16:36.35:413,36,0	1/1:1,16:17:39.59:493,40,0	0/0:12,0:12:3.01:0,3,42	1/1:4,16:20:48.13:606,48,0	1/1:2,13:15:36.10:454,36,0	1/1:0,2:2:3.01:38,3,0
chr10	11435766	.	G	GGC	4981.93	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=2.746;DP=520;FS=8.252;HRun=0;HaplotypeScore=146.2077;InbreedingCoeff=0.8350;MQ=74.65;MQ0=0;MQRankSum=-5.475;QD=10.11;ReadPosRankSum=4.121;VQSLOD=3.9638;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:26:54.35:272,54,0	1/1:10,0:10:20.36:101,20,0	0/0:9,0:8:20.92:0,21,192	0/0:18,0:18:47.97:0,48,456	1/1:20,0:20:18.16:129,18,0	1/1:21,0:21:45.90:211,46,0	1/1:23,0:23:46.04:248,46,0	1/1:17,0:17:41.51:273,42,0	1/1:16,0:16:30.93:138,31,0	1/1:19,0:19:47.14:241,47,0	1/1:22,0:22:37.53:157,38,0	1/1:25,0:25:53.22:250,53,0	1/1:19,0:19:39.87:172,40,0	1/1:27,0:27:52.53:278,53,0	1/1:19,0:19:46.33:211,46,0	1/1:14,0:14:33.91:157,34,0	1/1:31,0:31:65.26:307,65,0	1/1:19,0:19:43.84:237,44,0	1/1:13,0:13:22.23:142,22,0	1/1:18,0:18:41.08:212,41,0	1/1:39,0:39:71.98:333,72,0	1/1:14,0:14:30.58:131,31,0	1/1:14,0:14:27.24:115,27,0	1/1:19,0:19:35.65:179,36,0	1/1:0,4:5:3.01:52,3,0	1/1:23,0:23:46.08:302,46,0	1/1:18,0:18:18.17:122,18,0	1/1:2,0:2:2.60:10,3,0
chr10	11435971	.	AC	A	332.80	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.756;DP=582;FS=24.115;HRun=2;HaplotypeScore=54.5450;InbreedingCoeff=0.9971;MQ=84.85;MQ0=1;MQRankSum=-2.726;QD=23.77;ReadPosRankSum=1.637;VQSLOD=2.0693;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:72.18:0,72,981	0/0:10,0:10:30.07:0,30,403	0/0:15,0:15:39.12:0,39,558	0/0:25,0:25:72.11:0,72,993	0/0:18,0:18:54.17:0,54,780	0/0:24,0:24:72.21:0,72,1018	0/0:32,0:32:90.22:0,90,1292	0/0:42,0:42:99:0,126,1733	0/0:18,0:18:54.17:0,54,778	0/0:23,0:23:69.23:0,69,1006	0/0:19,0:19:54.17:0,54,778	0/0:18,0:18:54.18:0,54,799	0/0:22,0:22:63.19:0,63,902	0/0:17,0:17:51.13:0,51,692	0/0:19,0:19:57.18:0,57,823	0/0:14,0:14:42.14:0,42,621	0/0:25,0:24:69.10:0,69,941	0/0:26,0:26:78.21:0,78,1108	0/0:20,0:20:60.18:0,60,850	0/0:25,0:25:75.25:0,75,1109	0/0:20,0:20:60.16:0,60,829	0/0:22,0:22:63.17:0,63,906	0/0:20,0:20:60.19:0,60,865	0/0:20,0:20:57.18:0,57,823	1/1:1,13:14:33.11:427,33,0	0/0:22,0:22:63.21:0,63,932	0/0:18,0:18:54.17:0,54,778	0/0:9,0:9:24.08:0,24,354
chr10	11437662	.	CGGTTGTTTG	C	7253.37	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=14.594;DP=656;FS=2.562;HRun=0;HaplotypeScore=191.9832;InbreedingCoeff=0.9913;MQ=97.30;MQ0=1;MQRankSum=-12.819;QD=47.72;ReadPosRankSum=1.796;VQSLOD=4.4763;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,99,4161	0/0:10,0:10:24.08:0,24,1136	0/0:46,0:47:95.17:0,95,4197	0/0:25,0:26:53.29:0,53,2910	0/0:22,0:22:60.21:0,60,2720	0/0:26,0:26:69.24:0,69,3101	0/0:33,0:33:87.24:0,87,3789	1/1:12,10:22:30.06:576,30,0	0/0:28,0:28:75.26:0,75,3417	0/0:28,0:28:75.26:0,75,3241	0/0:16,0:16:36.12:0,36,1549	1/1:3,20:23:48.16:1405,48,0	1/1:0,19:19:45.15:1318,45,0	1/1:0,17:16:39.13:1142,39,0	0/0:24,0:24:63.22:0,63,2727	0/0:24,0:24:63.22:0,63,2873	0/0:35,0:35:99:0,99,4477	0/0:24,0:24:66.23:0,66,3104	1/1:7,6:13:18.06:527,18,0	1/1:7,16:23:36.12:1054,36,0	1/1:12,9:21:17.85:527,18,0	1/1:1,13:14:24.08:703,24,0	0/0:21,0:21:57.20:0,57,2546	0/0:22,0:22:66.23:0,66,2951	0/0:23,0:23:57.18:0,57,2336	0/0:33,0:33:93.32:0,93,3984	0/0:21,0:20:60.21:0,60,2666	0/0:5,0:5:12.04:0,12,568
chr10	11440304	.	A	AAAG	1357.11	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.567;DP=760;FS=7.366;HRun=0;HaplotypeScore=107.2454;InbreedingCoeff=0.9957;MQ=86.69;MQ0=1;MQRankSum=-3.069;QD=59.00;ReadPosRankSum=3.088;VQSLOD=5.5139;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,144,2425	0/0:9,0:9:21.07:0,21,358	0/0:26,0:25:62.86:0,63,939	0/0:26,0:26:72.22:0,72,1132	0/0:28,0:28:78.25:0,78,1299	0/0:19,0:19:57.18:0,57,937	0/0:33,0:33:93.29:0,93,1528	0/0:31,0:31:84.27:0,84,1381	0/0:26,0:26:75.23:0,75,1251	0/0:31,0:30:81.27:0,81,1355	0/0:24,0:24:66.21:0,66,1092	0/0:31,0:31:87.28:0,87,1452	0/0:28,0:28:84.28:0,84,1398	0/0:24,0:24:72.23:0,72,1196	0/0:30,0:30:87.27:0,87,1396	0/0:31,0:31:93.32:0,93,1586	0/0:29,0:29:87.30:0,87,1479	0/0:23,0:23:66.23:0,66,1116	0/0:18,0:18:51.16:0,51,818	0/0:30,0:30:90.31:0,90,1534	0/0:35,0:35:99:0,99,1643	0/0:21,0:21:63.17:0,63,1040	0/0:21,0:21:54.17:0,54,895	0/0:33,0:32:96.32:0,96,1609	1/1:2,21:23:63.22:1452,63,0	0/0:33,0:33:96.31:0,96,1585	0/0:36,0:36:99:0,105,1699	0/0:11,0:11:33.09:0,33,510
chr10	11440655	.	AGGTCCAT	A	6163.08	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=12.780;DP=611;FS=4.042;HRun=0;HaplotypeScore=140.9865;InbreedingCoeff=0.9833;MQ=82.15;MQ0=0;MQRankSum=-14.086;QD=64.20;ReadPosRankSum=-0.708;VQSLOD=4.6859;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,28:29:66.23:1737,66,0	0/0:8,0:8:24.08:0,24,968	0/0:23,0:22:60.21:0,60,2188	0/0:22,0:22:63.22:0,63,2194	1/1:0,21:21:48.16:1264,48,0	1/1:0,23:23:63.22:1660,63,0	1/1:1,22:23:57.20:1502,57,0	0/0:32,0:32:93.32:0,93,3424	0/0:18,0:18:54.19:0,54,2168	0/0:23,0:23:69.24:0,69,2713	0/0:25,0:25:72.23:0,72,2781	0/0:15,0:15:42.14:0,42,1662	0/0:20,0:20:57.20:0,57,2286	0/0:23,0:23:66.23:0,66,2522	0/0:28,0:28:84.29:0,84,3287	0/0:23,0:23:69.24:0,69,2772	0/0:29,0:29:87.30:0,87,3452	0/0:12,0:12:33.11:0,33,1333	0/0:19,0:19:57.20:0,57,2278	0/0:28,0:28:84.29:0,84,3351	0/0:31,0:31:90.31:0,90,3579	0/0:20,0:20:57.20:0,57,2253	0/0:22,0:22:66.23:0,66,2634	0/0:29,0:29:84.29:0,84,3363	0/0:17,0:17:51.18:0,51,2047	0/0:22,0:22:63.22:0,63,2546	0/0:23,0:23:69.24:0,69,2722	0/0:3,0:3:9.03:0,9,363
chr10	11440749	.	G	GC	11167.28	PASS	AC=40;AF=0.741;AN=54;BaseQRankSum=-13.009;DP=493;FS=0.403;HRun=5;HaplotypeScore=50.1104;InbreedingCoeff=0.9883;MQ=80.44;MQ0=0;MQRankSum=1.402;QD=32.00;ReadPosRankSum=1.693;VQSLOD=5.2844;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:34:75.18:0,75,806	1/1:1,14:15:36.12:474,36,0	0/0:14,0:14:15.08:0,15,246	0/0:12,0:12:32.77:0,33,303	0/0:15,0:15:42.11:0,42,451	0/0:27,0:27:69.17:0,69,741	0/0:27,0:27:75.14:0,75,786	1/1:3,15:18:42.09:496,42,0	1/1:2,12:14:33.11:434,33,0	1/1:1,5:6:12.02:141,12,0	1/1:0,7:7:18.06:237,18,0	1/1:1,15:16:42.14:552,42,0	1/1:1,10:11:24.55:316,25,0	1/1:4,12:16:33.10:419,33,0	1/1:2,25:27:75.24:986,75,0	1/1:3,20:23:48.16:631,48,0	1/1:1,25:26:72.23:947,72,0	1/1:1,9:10:27.08:343,27,0	1/1:2,15:17:45.15:587,45,0	1/1:0,9:9:21.06:265,21,0	1/1:3,24:27:54.18:710,54,0	1/1:2,13:15:39.13:512,39,0	1/1:1,12:13:30.10:394,30,0	1/1:3,24:27:60.20:789,60,0	0/0:14,0:14:30.07:0,30,321	1/1:1,22:23:66.17:828,66,0	1/1:0,29:29:84.27:1104,84,0	./.
chr10	11442487	.	C	CT	669.47	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-3.394;DP=708;FS=2.024;HRun=1;HaplotypeScore=60.5350;InbreedingCoeff=0.7711;MQ=54.74;MQ0=34;MQRankSum=-0.141;QD=33.47;ReadPosRankSum=1.107;VQSLOD=3.4411;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:58:99:0,159,2016	0/0:13,0:13:30.10:0,30,389	0/0:26,0:2:5.69:0,6,50	0/0:29,0:4:2.85:0,3,29	0/0:22,0:21:57.17:0,57,725	0/0:25,0:24:72.23:0,72,935	0/0:21,0:21:57.19:0,57,740	0/0:37,0:34:84.15:0,84,1015	0/0:24,0:24:63.16:0,63,816	0/0:31,0:28:75.21:0,75,923	0/0:19,0:19:44.95:0,45,584	0/0:15,0:15:45.12:0,45,556	0/0:32,0:32:84.27:0,84,1089	0/0:12,0:12:36.12:0,36,467	0/0:26,0:25:75.24:0,75,974	0/0:24,0:24:69.22:0,69,896	0/0:39,0:39:99:0,117,1484	0/0:29,0:28:81.26:0,81,1050	0/0:29,0:20:57.19:0,57,740	0/0:27,0:27:54.04:0,54,698	0/0:33,0:33:90.28:0,90,1153	0/0:22,0:20:57.05:0,57,739	0/0:14,0:11:33.11:0,33,427	0/0:25,0:25:72.23:0,72,935	1/1:0,20:20:51.17:764,51,0	0/0:19,0:19:54.18:0,54,701	0/0:29,0:28:87.27:0,87,1114	0/0:8,0:8:24.06:0,24,296
chr10	11443307	.	TTC	T	161.64	PASS	AC=14;AF=0.304;AN=46;BaseQRankSum=-0.335;DP=236;FS=0.000;HRun=0;HaplotypeScore=34.4093;InbreedingCoeff=0.4852;MQ=65.01;MQ0=9;MQRankSum=3.318;QD=2.74;ReadPosRankSum=2.648;VQSLOD=1.1730;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:9,6:15:2.13:20,2,0	0/0:2,0:2:3:0,3,25	0/0:11,0:7:3.01:0,3,44	0/0:12,0:5:0.47:0,0,1	1/1:13,0:12:11.97:94,12,0	1/1:7,0:7:2.98:21,3,0	1/1:6,0:6:2.98:21,3,0	0/0:19,0:18:24.01:0,24,213	0/0:10,0:10:5.99:0,6,50	0/0:10,0:10:13.25:0,13,112	0/0:6,0:6:8.99:0,9,75	0/0:3,0:3:8.99:0,9,74	1/1:7,0:7:11.96:94,12,0	1/1:5,0:5:2.99:24,3,0	0/0:8,0:8:5.99:0,6,50	0/0:12,0:12:5.99:0,6,50	0/0:8,0:15:2.94:0,3,18	0/0:4,0:3:3.47:0,3,26	./.	./.	1/1:6,0:6:2.99:24,3,0	./.	./.	0/0:5,0:5:3:0,3,25	./.	0/0:8,0:8:5.97:0,6,48	0/0:3,0:3:2.74:0,3,12	0/0:16,0:14:5.99:0,6,48
chr10	11443832	.	GT	G	755.92	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.957;DP=681;FS=3.818;HRun=5;HaplotypeScore=68.6001;InbreedingCoeff=0.9834;MQ=60.07;MQ0=0;MQRankSum=-0.009;QD=30.24;ReadPosRankSum=2.386;VQSLOD=4.5040;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,102,1325	0/0:10,0:10:30.09:0,30,395	0/0:25,0:21:51.17:0,51,681	0/0:16,0:16:48.16:0,48,654	0/0:35,0:35:99:0,99,1337	0/0:36,0:36:99:0,99,1313	0/0:14,0:14:39.13:0,39,534	0/0:41,0:41:99:0,108,1446	0/0:20,0:20:54.17:0,54,737	0/0:35,0:35:99:0,99,1322	0/0:22,0:22:57.19:0,57,766	0/0:20,0:20:48.16:0,48,657	0/0:21,0:21:45.15:0,45,615	0/0:19,0:19:54.18:0,54,738	0/0:33,0:33:87.27:0,87,1161	0/0:11,0:11:29.77:0,30,410	0/0:43,0:43:99:0,111,1461	0/0:9,0:9:15.05:0,15,205	0/0:22,0:20:51.16:0,51,684	0/0:40,0:40:99:0,117,1533	0/0:20,0:20:54.15:0,54,720	0/0:20,0:20:57.18:0,57,764	0/0:21,0:21:63.20:0,63,845	0/0:19,0:19:54.18:0,54,739	1/1:0,25:25:75.21:851,75,0	0/0:21,0:21:57.18:0,57,765	0/0:29,0:29:78.26:0,78,1065	0/0:18,0:18:48.16:0,48,657
chr10	11444717	.	GT	G	364.44	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.799;DP=551;FS=6.603;HRun=7;HaplotypeScore=50.6228;InbreedingCoeff=0.8050;MQ=79.36;MQ0=0;MQRankSum=-0.239;QD=20.25;ReadPosRankSum=1.161;VQSLOD=2.8655;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:90.29:0,90,1132	0/0:6,0:6:18.05:0,18,215	0/0:17,0:17:42.08:0,42,460	0/0:9,0:9:9.31:0,9,184	0/0:26,0:26:72.23:0,72,905	0/0:21,0:21:63.19:0,63,781	0/0:10,0:10:27.09:0,27,340	0/0:29,0:29:75.24:0,75,944	0/0:16,0:16:48.13:0,48,577	0/0:26,0:26:78.25:0,78,981	0/0:30,0:30:84.26:0,84,1046	0/0:13,0:13:36.12:0,36,453	0/0:17,0:17:45.14:0,45,566	0/0:15,0:15:45.14:0,45,563	0/0:19,0:19:57.18:0,57,717	0/0:13,0:13:36.12:0,36,452	0/0:19,0:19:45.14:0,45,566	0/0:12,0:12:30.10:0,30,377	0/0:28,0:28:78.24:0,78,969	0/0:33,0:33:87.28:0,87,1094	0/0:23,0:23:60.18:0,60,742	0/0:23,0:23:66.20:0,66,817	0/0:35,0:35:96.31:0,96,1208	0/0:11,0:11:30.05:0,30,359	1/1:0,18:18:45.10:459,45,0	0/0:19,0:19:57.18:0,57,717	0/0:31,0:30:90.21:0,90,1075	0/0:1,0:1:3.01:0,3,38
chr10	11445209	.	AT	A	315.73	PASS	AB=0.876;AC=4;AF=0.071;AN=56;BaseQRankSum=5.663;DP=590;FS=0.716;HRun=10;HaplotypeScore=60.8523;InbreedingCoeff=0.4851;MQ=78.55;MQ0=1;MQRankSum=-0.795;QD=6.19;ReadPosRankSum=0.653;VQSLOD=0.9587;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,1:39:73.16:0,73,999	0/0:14,0:14:42.10:0,42,456	0/0:26,1:25:19.29:0,19,359	0/0:18,0:16:34.84:0,35,333	0/0:22,0:22:50.95:0,51,529	0/0:29,0:29:84.19:0,84,910	0/0:12,0:13:35.93:0,36,379	0/0:21,0:21:45.11:0,45,485	0/0:17,0:17:48.08:0,48,502	0/0:27,1:28:40.01:0,40,633	0/0:15,0:16:47.92:0,48,486	0/0:9,0:10:26.94:0,27,280	0/0:16,0:16:42.08:0,42,447	0/0:26,0:26:69.18:0,69,756	0/0:27,1:28:55.12:0,55,807	0/0:22,0:23:59.97:0,60,630	0/0:32,1:33:70.14:0,70,963	0/0:23,0:23:54.09:0,54,574	0/0:21,0:24:38.92:0,39,578	0/0:20,0:20:51.12:0,51,549	0/0:13,0:13:27.03:0,27,278	0/1:15,3:18:30.07:30,0,351	0/1:15,2:17:3.99:4,0,402	0/0:20,0:20:51.11:0,51,546	1/1:1,15:16:44.98:391,45,0	0/0:30,0:30:84.18:0,84,904	0/0:24,1:25:31.02:0,31,532	0/0:3,0:3:9.02:0,9,100
chr10	11445555	.	T	TC	27103.07	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-8.198;DP=809;FS=4.966;HRun=3;HaplotypeScore=77.1682;InbreedingCoeff=0.9897;MQ=90.33;MQ0=0;MQRankSum=-12.197;QD=36.23;ReadPosRankSum=6.621;VQSLOD=4.7614;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,52:55:99:1714,123,0	1/1:0,7:7:21.07:294,21,0	0/0:31,0:31:81.21:0,81,925	0/0:30,0:30:71.91:0,72,912	1/1:2,26:28:78.19:1061,78,0	1/1:1,28:29:75.25:1049,75,0	1/1:0,28:28:75.25:1049,75,0	1/1:0,26:26:78.18:985,78,0	1/1:2,42:44:99:1673,120,0	1/1:3,38:41:99:1508,108,0	1/1:0,16:16:47.97:620,48,0	1/1:1,24:25:66.22:923,66,0	1/1:2,31:33:90.30:1256,90,0	1/1:2,27:29:75.25:1047,75,0	1/1:1,35:36:86.33:1182,86,0	1/1:0,32:31:90.30:1259,90,0	1/1:1,41:42:99:1469,105,0	1/1:1,12:13:33.11:462,33,0	1/1:3,31:34:93.24:1209,93,0	1/1:1,25:26:72.24:1003,72,0	1/1:5,41:46:99:1427,102,0	1/1:1,26:27:78.26:1088,78,0	1/1:3,28:31:78.26:1091,78,0	1/1:3,27:30:78.26:1091,78,0	1/1:0,20:20:57.19:798,57,0	1/1:1,23:24:69.20:922,69,0	1/1:0,21:21:50.70:713,51,0	1/1:0,5:5:15.05:210,15,0
chr10	11446990	.	AT	A	533.23	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.667;DP=639;FS=0.908;HRun=3;HaplotypeScore=64.5241;InbreedingCoeff=0.9822;MQ=85.48;MQ0=0;MQRankSum=-1.408;QD=26.66;ReadPosRankSum=1.359;VQSLOD=2.8099;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,102,1444	0/0:8,0:8:24.05:0,24,324	0/0:21,0:21:57.16:0,57,775	0/0:22,0:22:66.19:0,66,898	0/0:34,0:34:84.28:0,84,1205	0/0:20,0:20:54.18:0,54,776	0/0:13,0:13:39.13:0,39,562	0/0:26,0:26:75.25:0,75,1065	0/0:28,0:28:84.28:0,84,1209	0/0:21,0:21:63.18:0,63,885	0/0:26,0:26:75.25:0,75,1078	0/0:18,0:18:51.17:0,51,724	0/0:35,0:35:99:0,105,1499	0/0:24,0:24:69.23:0,69,994	0/0:18,0:18:54.17:0,54,761	0/0:20,0:17:57.19:0,57,821	0/0:26,0:26:78.25:0,78,1103	0/0:15,0:15:33.08:0,33,453	0/0:31,0:31:72.70:0,73,1016	0/0:28,0:28:84.27:0,84,1185	0/0:22,0:22:66.22:0,66,950	0/0:20,0:20:54.17:0,54,759	0/0:18,0:18:54.18:0,54,777	0/0:24,0:24:72.23:0,72,1019	1/1:0,20:20:51.16:628,51,0	0/0:27,0:27:81.26:0,81,1140	0/0:30,0:30:87.29:0,87,1244	0/0:7,0:7:15.05:0,15,216
chr10	11447436	.	TTGTC	T	206.82	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.910;DP=552;FS=1.266;HRun=0;HaplotypeScore=151.3903;InbreedingCoeff=0.9860;MQ=75.42;MQ0=1;MQRankSum=-1.046;QD=11.49;ReadPosRankSum=-2.574;VQSLOD=2.6397;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:24.08:0,24,625	0/0:10,0:10:30.10:0,30,752	0/0:33,0:32:72.25:0,72,1776	0/0:35,0:34:52.05:0,52,1297	0/0:33,0:32:57.16:0,57,1344	0/0:23,0:23:48.14:0,48,1010	0/0:13,0:13:21.05:0,21,458	0/0:31,0:30:90.21:0,90,1993	0/0:16,0:16:45.09:0,45,989	0/0:24,0:24:63.17:0,63,1487	0/0:26,0:26:75.25:0,75,1851	0/0:13,0:13:30.10:0,30,704	0/0:12,0:12:32.99:0,33,623	0/0:17,0:17:33.11:0,33,743	0/0:24,0:24:66.19:0,66,1476	0/0:24,0:24:57.19:0,57,1373	0/0:15,0:15:42.14:0,42,1075	0/0:14,0:14:42.14:0,42,1090	0/0:14,0:14:39.12:0,39,947	0/0:19,0:19:42.12:0,42,987	0/0:21,0:21:51.16:0,51,1245	0/0:15,0:15:39.12:0,39,974	0/0:27,0:27:72.17:0,72,1604	0/0:11,0:11:24.07:0,24,578	1/1:2,16:18:21.03:299,21,0	0/0:18,0:18:51.18:0,51,1320	0/0:15,0:15:44.18:0,44,1032	0/0:15,0:15:36.12:0,36,922
chr10	11447466	.	GTC	G	346.98	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=1.420;DP=574;FS=1.014;HRun=0;HaplotypeScore=164.7352;InbreedingCoeff=0.7688;MQ=66.49;MQ0=15;MQRankSum=2.174;QD=4.82;ReadPosRankSum=-0.135;VQSLOD=2.9536;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,9:12:6.02:82,6,0	0/0:14,0:14:33.36:0,33,541	0/0:62,0:29:56.55:0,57,942	0/0:92,0:50:64.52:0,65,1106	1/1:8,23:30:11.91:165,12,0	1/1:4,15:19:12.04:156,12,0	1/1:1,9:10:6.02:82,6,0	0/0:34,0:30:81.12:0,81,1215	0/0:13,0:13:30.05:0,30,380	0/0:16,0:15:42.14:0,42,740	0/0:25,0:25:53.21:0,53,848	0/0:9,0:9:2.64:0,3,53	0/0:8,0:8:9.17:0,9,118	0/0:14,0:14:10.28:0,10,145	0/0:17,0:17:42.08:0,42,520	0/0:22,0:22:36.07:0,36,541	0/0:8,0:8:18.05:0,18,284	0/0:12,0:12:29.69:0,30,487	0/0:15,0:14:38.25:0,38,541	0/0:20,0:20:21.03:0,21,367	0/0:13,0:13:21.07:0,21,360	0/0:17,0:17:27.09:0,27,469	0/0:18,0:18:35.87:0,36,497	0/0:5,0:5:6.02:0,6,91	0/0:23,0:23:2.11:0,2,51	0/0:19,0:19:53.59:0,54,847	0/0:16,0:16:35.65:0,36,597	0/0:10,0:10:20.85:0,21,358
chr10	11447474	.	G	GTC	99.85	PASS	AB=0.963;AC=5;AF=0.089;AN=56;BaseQRankSum=3.868;DP=576;FS=1.006;HRun=0;HaplotypeScore=183.2282;InbreedingCoeff=0.0980;MQ=65.45;MQ0=18;MQRankSum=-1.741;QD=1.66;ReadPosRankSum=-6.557;VQSLOD=0.4882;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:9:5.99:0,6,57	0/0:13,0:13:24.30:0,24,297	0/0:59,0:22:2.39:0,2,213	0/0:94,0:50:12.65:0,13,351	0/0:30,0:29:11.77:0,12,142	0/0:17,0:16:8.87:0,9,107	0/0:13,0:12:4.11:0,4,64	0/0:37,3:28:50.46:0,50,582	0/0:11,0:11:3.01:0,3,39	0/0:14,0:13:39.12:0,39,493	0/0:22,0:21:33.11:0,33,427	0/0:9,2:11:5.69:0,6,53	1/1:9,0:9:3.89:32,4,0	0/1:14,1:15:10.81:11,0,66	0/0:17,0:17:6.37:0,6,77	0/0:18,0:18:17.70:0,18,232	0/0:9,0:8:11.76:0,12,124	0/0:11,0:11:13.08:0,13,310	0/1:19,1:19:99:152,0,317	0/0:24,1:24:16.77:0,17,217	0/0:10,0:10:12.04:0,12,155	0/0:17,2:19:23.35:0,23,280	0/0:17,0:17:15.15:0,15,194	0/0:5,0:5:3.01:0,3,39	0/0:19,3:22:2.22:0,2,7	0/0:18,0:18:45.44:0,45,579	0/1:16,0:16:10.33:10,0,341	0/0:8,0:8:14.94:0,15,194
chr10	11447507	.	TC	T	488.01	PASS	AB=0.655;AC=26;AF=0.565;AN=46;BaseQRankSum=-0.731;DP=332;FS=0.000;HRun=1;HaplotypeScore=111.7357;InbreedingCoeff=0.3885;MQ=86.98;MQ0=13;MQRankSum=-2.599;QD=3.28;ReadPosRankSum=0.682;VQSLOD=-0.0875;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	1/1:2,3:5:5.43:47,5,0	0/0:39,0:15:16.57:0,17,255	0/0:77,0:34:37.44:0,37,300	0/1:2,11:13:0.14:0,0,0	./.	0/1:2,4:5:0.07:0,0,0	./.	0/0:3,3:6:0:0,0,0	1/1:3,8:10:5.36:166,5,0	0/1:4,11:12:0.13:0,0,1	1/1:5,5:10:2.61:20,3,0	0/1:3,5:8:2.54:13,0,3	0/0:6,6:12:2.76:0,3,6	0/1:4,4:8:0:1,0,0	1/1:0,6:6:2.82:21,3,0	0/0:4,2:5:2.22:0,2,7	0/1:2,2:4:2.19:17,0,2	1/1:2,1:3:1.14:18,1,0	1/1:2,12:13:2.43:21,2,0	./.	0/0:7,6:13:0:0,0,0	0/1:3,9:12:0.02:0,0,0	./.	0/1:12,0:12:0:0,0,0	1/1:2,5:6:14.94:118,15,0	1/1:3,9:11:17.23:88,17,0	1/1:0,3:3:8.97:72,9,0
chr10	11447508	.	CGGCA	C	2061.88	PASS	AB=0.840;AC=41;AF=0.891;AN=46;BaseQRankSum=-3.372;DP=317;FS=4.008;HRun=0;HaplotypeScore=107.6009;InbreedingCoeff=0.3238;MQ=88.73;MQ0=12;MQRankSum=-2.758;QD=8.21;ReadPosRankSum=-0.006;VQSLOD=2.6858;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	1/1:3,1:4:2.69:58,3,0	0/0:38,0:15:22.36:0,22,313	0/1:74,0:34:99:123,0,147	0/1:11,2:13:0.13:0,0,0	1/1:8,2:9:1.24:3,1,0	1/1:4,2:5:1.89:4,2,0	./.	0/1:3,2:6:0:0,0,0	1/1:8,2:10:27.09:496,27,0	1/1:11,3:11:0.94:1,1,0	1/1:5,5:10:2.38:56,2,0	1/1:5,3:8:9.50:136,10,0	1/1:6,5:12:2.30:59,2,0	1/1:4,1:7:0.47:1,0,0	1/1:6,0:6:2.88:58,3,0	1/1:3,3:5:6.01:59,6,0	1/1:2,1:3:6.02:115,6,0	1/1:1,1:2:6.02:121,6,0	1/1:12,2:13:3.92:60,4,0	./.	./.	1/1:10,2:12:0.34:1,0,0	./.	1/1:5,5:10:0.47:1,0,0	1/1:5,1:5:15.05:269,15,0	1/1:9,3:11:21.54:377,22,0	1/1:3,0:3:9.03:166,9,0
chr10	11447509	.	GGCA	G	894.81	PASS	AB=0.807;AC=34;AF=0.708;AN=48;BaseQRankSum=0.183;DP=314;FS=19.375;HRun=0;HaplotypeScore=111.1805;InbreedingCoeff=0.3952;MQ=90.27;MQ0=12;MQRankSum=-2.551;QD=5.29;ReadPosRankSum=0.800;VQSLOD=0.5820;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	1/1:3,1:4:1.50:32,1,0	0/0:36,0:16:3.15:0,3,258	0/0:71,0:34:11.77:0,12,287	0/1:9,4:13:0.11:1,0,0	0/1:6,4:9:0:0,0,0	0/1:5,1:5:0.32:0,0,0	./.	0/0:5,1:6:0:0,0,0	1/1:4,7:10:24.53:278,25,0	1/1:10,4:11:0.48:1,0,0	1/1:7,3:10:2.42:31,2,0	1/1:5,3:8:6.99:34,7,0	1/1:11,1:12:1.79:16,2,0	0/1:6,1:7:0:1,0,0	1/1:3,3:6:3.01:34,3,0	1/1:4,2:5:0.89:2,1,0	1/1:1,2:3:5.88:50,6,0	1/1:1,1:2:5.98:55,6,0	1/1:10,4:13:2.15:33,2,0	./.	0/0:13,0:13:0:0,0,0	0/1:5,7:12:0.21:0,0,0	./.	0/1:9,0:10:0.08:0,0,0	1/1:4,2:5:15.01:146,15,0	1/1:5,7:11:21.37:183,21,0	1/1:1,2:3:9.02:98,9,0
chr10	11447510	.	GCA	G	1009.22	PASS	AB=0.967;AC=35;AF=0.761;AN=46;BaseQRankSum=-1.400;DP=313;FS=2.527;HRun=0;HaplotypeScore=107.8090;InbreedingCoeff=0.3205;MQ=88.11;MQ0=12;MQRankSum=-1.901;QD=4.02;ReadPosRankSum=1.135;VQSLOD=2.0705;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	1/1:4,0:4:2.51:28,3,0	0/0:36,0:16:12.66:0,13,217	0/1:70,0:32:96.98:97,0,125	0/1:13,0:13:0.13:0,0,0	./.	0/1:6,0:5:0:0,0,0	./.	0/1:6,0:6:0:0,0,0	1/1:11,0:10:26.95:251,27,0	0/1:14,0:11:0.16:1,0,0	1/1:10,0:10:2.64:32,3,0	1/1:8,0:8:8.96:75,9,0	1/1:12,0:12:2.45:30,2,0	0/1:7,0:7:0:0,0,0	1/1:6,0:6:3:28,3,0	1/1:5,1:5:3.35:16,3,0	1/1:3,0:3:6:55,6,0	1/1:2,0:2:5.98:55,6,0	1/1:14,0:13:3.65:35,4,0	./.	0/1:13,0:13:0:0,0,0	0/1:12,0:12:0:0,0,0	./.	0/1:6,4:10:0:0,0,0	1/1:6,0:5:15.03:149,15,0	1/1:12,0:11:20.66:167,21,0	1/1:3,0:3:9.02:88,9,0
chr10	11447604	.	C	CA	240.99	PASS	AC=2;AF=0.50;AN=4;BaseQRankSum=1.423;DP=11;FS=0.000;HRun=1;HaplotypeScore=185.4838;MQ=81.42;MQ0=0;MQRankSum=-1.739;QD=24.10;ReadPosRankSum=1.423;VQSLOD=3.4587;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:1,0:1:3.01:0,3,40	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	1/1:0,10:10:30.06:309,30,0	./.	./.	./.
chr10	11447621	.	C	CA	408.78	PASS	AC=2;AF=0.33;AN=6;BaseQRankSum=1.423;DP=15;FS=0.000;HRun=0;HaplotypeScore=122.4960;MQ=95.89;MQ0=0;MQRankSum=-1.739;QD=37.16;ReadPosRankSum=1.423;VQSLOD=3.0502;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:2,0:1:3.01:0,3,30	0/0:2,0:1:0.47:0,0,1	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	1/1:0,11:10:30.10:477,30,0	./.	./.	./.
chr10	11447625	.	CCA	C	79.82	PASS	AC=2;AF=0.33;AN=6;BaseQRankSum=2.451;DP=18;FS=0.000;HRun=0;HaplotypeScore=145.1145;MQ=88.09;MQ0=0;MQRankSum=0.761;QD=7.26;ReadPosRankSum=2.451;VQSLOD=3.3297;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:2,1:2:2.94:0,3,18	0/0:4,0:3:4.13:0,4,12	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	1/1:0,11:10:28.61:151,29,0	./.	./.	./.
chr10	11447736	.	AAACC	A	3586.42	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=4.032;DP=614;FS=7.808;HRun=0;HaplotypeScore=122.6848;InbreedingCoeff=0.9995;MQ=64.24;MQ0=0;MQRankSum=-5.418;QD=45.40;ReadPosRankSum=-2.252;VQSLOD=3.7493;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:93.13:0,93,2347	0/0:9,0:9:27.09:0,27,706	0/0:24,0:21:47.03:0,47,1278	0/0:27,0:25:45.55:0,46,1197	0/0:28,0:28:78.17:0,78,1924	0/0:19,0:19:54.17:0,54,1394	0/0:26,0:26:69.22:0,69,1735	1/1:10,18:28:72.18:1210,72,0	0/0:24,0:24:69.10:0,69,1700	0/0:23,0:23:69.24:0,69,1807	0/0:29,0:28:86.76:0,87,2037	0/0:19,0:19:54.06:0,54,1294	0/0:19,0:19:54.16:0,54,1324	0/0:22,0:22:57.19:0,57,1474	0/0:24,0:24:69.17:0,69,1784	0/0:13,0:13:39.08:0,39,989	0/0:25,0:25:72.23:0,72,1881	0/0:17,0:17:45.13:0,45,1156	1/1:1,12:13:33.09:538,33,0	1/1:2,18:20:60.20:1100,60,0	1/1:4,14:18:39.13:738,39,0	0/0:27,0:27:81.19:0,81,2119	0/0:22,0:22:66.11:0,66,1546	0/0:25,0:25:66.20:0,66,1604	0/0:13,0:13:33.11:0,33,890	0/0:27,0:27:81.26:0,81,2102	0/0:27,0:27:81.21:0,81,2040	0/0:12,0:12:36.12:0,36,971
chr10	11448307	.	G	GCACAC	80.56	PASS	AB=0.600;AC=1;AF=0.018;AN=56;BaseQRankSum=2.844;DP=911;FS=0.000;HRun=0;HaplotypeScore=212.9426;InbreedingCoeff=-0.0185;MQ=66.28;MQ0=2;MQRankSum=-0.859;QD=8.95;ReadPosRankSum=-0.325;VQSLOD=2.6856;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:63.11:0,63,1236	0/0:7,0:7:21.07:0,21,484	0/0:43,0:34:80.57:0,81,1509	0/0:61,0:42:94.97:0,95,1744	0/0:20,0:20:23.62:0,24,469	0/0:12,0:12:15.05:0,15,337	0/0:16,0:16:32.87:0,33,712	0/0:38,0:38:99:0,105,2324	0/0:29,0:29:72.25:0,72,1674	0/0:31,0:31:90.30:0,90,2044	0/0:11,0:11:33.11:0,33,752	0/0:42,0:42:99:0,123,2811	0/0:38,0:38:99:0,111,2538	0/0:28,0:28:81.26:0,81,1827	0/0:31,0:31:87.30:0,87,1992	0/0:34,0:34:96.33:0,96,2216	0/0:36,0:36:99:0,108,2456	0/0:30,0:30:90.31:0,90,2077	0/0:25,0:25:66.23:0,66,1497	0/0:18,0:18:50.71:0,51,1174	0/0:166,0:166:99:0,476,10711	0/0:18,0:18:54.19:0,54,1229	0/0:20,0:20:60.21:0,60,1397	0/0:42,1:43:99:0,120,2688	0/1:2,6:9:35.38:155,0,35	0/0:35,0:35:99:0,105,2419	0/0:20,0:20:57.20:0,57,1328	0/0:11,0:11:27.09:0,27,622
chr10	11448334	.	GCACAC	G	969.03	PASS	AB=0.590;AC=6;AF=0.107;AN=56;BaseQRankSum=8.612;DP=900;FS=2.657;HRun=0;HaplotypeScore=194.6707;InbreedingCoeff=0.6504;MQ=60.06;MQ0=13;MQRankSum=-6.928;QD=12.11;ReadPosRankSum=-4.282;VQSLOD=2.1054;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:12,21:34:2.17:545,2,0	0/0:7,0:7:17.31:0,17,519	0/0:46,0:16:34.36:0,34,1014	0/0:44,0:16:31.83:0,32,532	0/1:3,12:15:0.11:0,0,1	1/1:6,10:16:24.01:406,24,0	0/1:6,9:15:24.43:135,0,24	0/0:36,0:37:99:0,111,3266	0/0:32,0:32:90.31:0,90,2996	0/0:31,0:31:93.31:0,93,2759	0/0:11,0:11:33.11:0,33,1038	0/0:40,0:40:99:0,117,3436	0/0:43,0:43:99:0,129,4106	0/0:28,0:28:84.29:0,84,2613	0/0:32,0:32:92.49:0,92,2947	0/0:32,0:34:99:0,99,3113	0/0:31,0:32:96.33:0,96,2889	0/0:33,0:33:97.21:0,97,2945	0/0:31,0:30:90.29:0,90,2452	0/0:15,0:17:49.72:0,50,1412	0/0:162,0:164:99:0,455,13974	0/0:20,0:20:60.19:0,60,1793	0/0:21,0:21:60.19:0,60,1776	0/0:37,0:38:99:0,108,3193	0/0:8,0:8:21.07:0,21,690	0/0:32,0:36:99:0,104,3042	0/0:26,0:26:75.26:0,75,2318	0/0:5,0:7:18.06:0,18,505
chr10	11449321	.	TTGTGTGTGTG	T	2591.24	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=3.460;DP=401;FS=7.615;HRun=0;HaplotypeScore=133.5465;InbreedingCoeff=0.8138;MQ=58.46;MQ0=7;MQRankSum=-7.895;QD=43.92;ReadPosRankSum=1.641;VQSLOD=2.8765;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,13:22:3.35:484,3,0	0/0:5,0:5:15.05:0,15,728	0/0:28,0:21:9.03:0,9,259	0/0:25,0:12:14.64:0,15,452	1/1:1,9:10:30.10:895,30,0	1/1:4,10:14:30.10:907,30,0	1/1:6,7:13:15.05:454,15,0	0/0:11,0:23:45.70:0,46,396	0/0:6,0:6:18.06:0,18,886	0/0:13,0:15:33.11:0,33,1507	0/0:11,0:13:30.10:0,30,1293	0/0:5,0:10:12.04:0,12,523	0/0:4,0:9:9.03:0,9,392	0/0:6,0:11:12.04:0,12,523	0/0:12,0:12:27.09:0,27,1300	0/0:10,0:11:30.10:0,30,1391	0/0:17,0:18:42.14:0,42,1962	0/0:12,0:12:24.08:0,24,1128	0/0:11,0:12:10.14:0,10,70	0/0:5,0:10:13.48:0,13,77	0/0:6,0:7:8.70:0,9,103	0/0:8,0:15:29.77:0,30,953	0/0:14,0:15:33.11:0,33,1429	0/0:12,0:11:27.09:0,27,1349	0/0:15,0:15:3.01:0,3,131	0/0:14,0:16:36.12:0,36,1507	0/0:22,0:23:63.22:0,63,2930	0/0:14,0:14:30.10:0,30,1387
chr10	11449798	.	T	TAGG	1531.64	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-0.182;DP=671;FS=8.270;HRun=0;HaplotypeScore=109.5788;InbreedingCoeff=0.9446;MQ=75.47;MQ0=0;MQRankSum=-2.919;QD=58.91;ReadPosRankSum=-1.339;VQSLOD=4.9633;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,141,2310	0/0:16,0:16:42.14:0,42,700	0/0:17,0:18:34.63:0,35,617	0/0:24,0:24:63.22:0,63,1049	0/0:26,0:26:66.23:0,66,1092	0/0:30,0:30:84.29:0,84,1389	0/0:13,0:13:39.12:0,39,624	0/0:27,0:27:81.26:0,81,1313	0/0:32,0:32:93.32:0,93,1544	0/0:26,0:26:72.20:0,72,1166	0/0:32,0:32:90.31:0,90,1499	0/0:21,0:21:63.22:0,63,1050	0/0:24,0:24:66.23:0,66,1100	0/0:18,0:18:54.18:0,54,900	0/0:17,0:17:51.13:0,51,774	0/0:25,0:25:69.24:0,69,1145	0/0:13,0:13:39.13:0,39,650	0/0:16,0:16:45.15:0,45,745	0/0:14,0:14:36.12:0,36,600	0/0:27,0:27:75.26:0,75,1243	0/0:31,0:31:93.30:0,93,1523	0/0:17,0:17:45.15:0,45,750	0/0:21,0:21:60.21:0,60,1000	0/0:41,0:41:99:0,120,1999	1/1:4,22:26:72.25:1626,72,0	0/0:31,0:31:90.29:0,90,1454	0/0:32,0:31:96.33:0,96,1599	0/0:3,0:3:9.01:0,9,123
chr10	11449871	.	T	TA	399.61	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-0.512;DP=591;FS=4.688;HRun=9;HaplotypeScore=67.8575;InbreedingCoeff=0.7797;MQ=70.19;MQ0=2;MQRankSum=-1.228;QD=21.03;ReadPosRankSum=-1.708;VQSLOD=3.8364;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,111,948	0/0:4,0:4:8.99:0,9,78	0/0:25,0:18:30.08:0,30,260	0/0:28,0:20:1.99:0,2,134	0/0:24,0:24:68.95:0,69,591	0/0:24,0:24:56.98:0,57,495	0/0:13,0:13:35.94:0,36,302	0/0:27,0:27:68.96:0,69,597	0/0:20,0:20:50.96:0,51,439	0/0:33,0:33:79.20:0,79,678	0/0:24,0:24:56.97:0,57,495	0/0:12,0:12:35.99:0,36,310	0/0:14,0:14:35.98:0,36,312	0/0:18,0:18:50.99:0,51,443	0/0:22,0:22:59.96:0,60,515	0/0:12,0:12:32.99:0,33,286	0/0:20,0:20:56.97:0,57,489	0/0:16,0:16:41.94:0,42,358	0/0:27,0:27:62.97:0,63,546	0/0:30,0:30:83.96:0,84,724	0/0:20,0:20:47.98:0,48,414	0/0:17,0:17:42.44:0,42,362	0/0:25,0:25:62.98:0,63,546	0/0:29,0:29:77.93:0,78,669	1/1:6,13:19:45.12:494,45,0	0/0:23,0:23:60.87:0,61,522	0/0:16,0:16:44.96:0,45,383	0/0:6,0:6:15:0,15,130
chr10	11450519	.	CA	C	356.30	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.732;DP=617;FS=15.751;HRun=6;HaplotypeScore=59.8749;InbreedingCoeff=0.9984;MQ=81.29;MQ0=0;MQRankSum=-0.281;QD=22.27;ReadPosRankSum=0.917;VQSLOD=2.0141;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,108,1420	0/0:12,0:12:33.11:0,33,434	0/0:19,0:20:39.01:0,39,463	0/0:18,0:18:39.89:0,40,447	0/0:27,0:27:78.23:0,78,996	0/0:23,0:23:63.18:0,63,796	0/0:18,0:18:48.16:0,48,632	0/0:26,0:26:78.19:0,78,943	0/0:24,0:24:69.16:0,69,859	0/0:19,0:19:57.14:0,57,705	0/0:26,0:26:72.22:0,72,933	0/0:28,0:28:72.21:0,72,918	0/0:16,0:16:42.14:0,42,553	0/0:19,0:19:57.16:0,57,720	0/0:12,0:12:36.11:0,36,460	0/0:21,0:21:63.20:0,63,829	0/0:35,0:34:96.24:0,96,1241	0/0:14,0:14:42.12:0,42,535	0/0:19,0:19:51.15:0,51,634	0/0:30,0:30:81.26:0,81,1052	0/0:29,0:29:84.22:0,84,1047	0/0:17,0:17:51.15:0,51,647	0/0:17,0:17:48.16:0,48,629	0/0:23,0:23:66.12:0,66,813	1/1:0,16:16:42.11:451,42,0	0/0:33,0:33:90.28:0,90,1171	0/0:24,0:24:72.14:0,72,907	0/0:9,0:9:27.09:0,27,355
chr10	11451502	.	G	GTA	668.12	PASS	AB=0.932;AC=11;AF=0.196;AN=56;BaseQRankSum=11.008;DP=900;FS=61.803;HRun=0;HaplotypeScore=377.5004;InbreedingCoeff=0.0910;MQ=34.20;MQ0=11;MQRankSum=-10.677;QD=1.75;ReadPosRankSum=-0.011;VQSLOD=-0.2537;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:2.96:0,3,24	0/0:17,1:18:17.81:0,18,213	0/0:15,0:3:9.02:0,9,115	0/0:12,0:3:3.01:0,3,46	0/1:45,4:49:8.52:9,0,120	0/0:29,1:30:11.81:0,12,177	0/0:19,0:19:6.97:0,7,130	0/1:35,0:32:12.03:12,0,717	0/0:37,0:37:10.44:0,10,257	0/1:60,6:65:99:418,0,594	0/0:30,1:31:2.83:0,3,86	0/0:34,0:34:17.24:0,17,178	0/0:41,0:41:37.74:0,38,499	0/0:30,0:30:11.52:0,12,139	0/0:54,0:53:22.64:0,23,234	0/0:33,0:32:23.56:0,24,320	0/0:22,0:22:27.87:0,28,341	0/0:12,0:12:18.06:0,18,247	0/0:16,0:14:42.09:0,42,497	0/1:43,5:48:16.64:17,0,260	0/0:50,0:47:80.70:0,81,891	1/1:36,4:40:14.43:44,14,0	1/1:29,4:32:9:24,9,0	0/0:24,0:24:13.70:0,14,197	0/1:35,6:39:44.67:116,0,45	0/1:46,1:46:99:104,0,685	0/0:26,0:26:3.44:0,3,354	0/1:20,1:21:61.38:74,0,61
chr10	11451506	.	G	GAGAA	900.81	PASS	AB=0.986;AC=19;AF=0.339;AN=56;BaseQRankSum=9.551;DP=846;FS=43.574;HRun=0;HaplotypeScore=368.4842;InbreedingCoeff=-0.1607;MQ=33.79;MQ0=11;MQRankSum=-9.541;QD=1.54;ReadPosRankSum=-5.673;VQSLOD=0.3057;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:13,0:13:0:0,0,0	0/1:18,0:18:10.92:11,0,237	0/0:10,0:2:6:0,6,87	0/0:10,0:2:3.01:0,3,59	0/1:46,1:47:35.97:36,0,154	0/1:28,0:28:33.34:33,0,181	0/1:17,0:17:8.35:8,0,106	0/0:31,0:29:65.59:0,66,996	0/1:36,0:36:4.37:4,0,315	0/1:62,0:60:99:244,0,1071	0/1:30,0:30:10.77:11,0,113	0/1:34,0:34:4.53:5,0,177	0/0:39,0:39:16.90:0,17,577	0/1:28,0:28:26.51:27,0,118	0/1:52,0:51:52.38:52,0,250	0/0:31,0:30:5.26:0,5,336	0/0:20,0:20:31.01:0,31,407	0/0:11,0:11:18.06:0,18,263	0/0:14,0:12:33.11:0,33,447	0/1:48,0:47:30.47:30,0,268	0/0:45,0:42:38.06:0,38,846	1/1:33,2:35:16.96:111,17,0	1/1:33,0:32:8.88:22,9,0	0/0:24,0:24:10.56:0,11,220	0/1:32,5:38:46.32:317,0,46	0/1:43,1:43:43.83:44,0,906	0/0:26,0:26:42.81:0,43,511	0/1:20,0:20:85.18:104,0,85
chr10	11462805	.	A	ATGT	5414.32	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-11.873;DP=836;FS=7.635;HRun=0;HaplotypeScore=111.3091;InbreedingCoeff=0.9587;MQ=70.67;MQ0=2;MQRankSum=-1.594;QD=38.67;ReadPosRankSum=1.109;VQSLOD=5.4814;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,114,1608	0/0:8,0:8:18.06:0,18,258	0/0:31,0:29:32.75:0,33,456	0/0:27,0:26:40.29:0,40,519	0/0:25,0:25:62.98:0,63,862	0/0:21,0:21:54.18:0,54,772	0/0:37,0:37:78.25:0,78,1100	0/0:33,0:33:57.17:0,57,770	0/0:35,0:35:78.25:0,78,1101	0/0:29,0:29:63.17:0,63,838	0/0:18,0:18:35.70:0,36,515	1/1:12,29:42:87.30:1734,87,0	1/1:6,17:23:45.15:915,45,0	1/1:15,32:47:90.31:1821,90,0	0/0:37,0:37:72.24:0,72,1031	0/0:31,0:31:66.22:0,66,945	0/0:30,0:30:79.48:0,79,1099	0/0:20,0:20:45.11:0,45,622	0/0:31,0:31:41.63:0,42,582	0/0:22,0:22:42.14:0,42,602	0/0:55,0:55:99:0,123,1708	1/1:8,20:28:11.17:944,11,0	0/0:26,0:26:69.22:0,69,970	0/0:47,0:47:99:0,111,1554	0/0:20,0:20:42.12:0,42,581	0/0:31,0:31:72.23:0,72,1015	0/0:31,0:31:60.20:0,60,859	0/0:3,0:3:6.02:0,6,86
chr10	11463445	.	C	CGG	3214.93	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-2.244;DP=650;FS=9.563;HRun=7;HaplotypeScore=86.9694;InbreedingCoeff=0.9565;MQ=74.24;MQ0=0;MQRankSum=-0.572;QD=24.54;ReadPosRankSum=-1.220;VQSLOD=1.8640;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,30:37:78.73:1254,79,0	0/0:12,0:12:30.08:0,30,349	0/0:15,0:15:29.84:0,30,330	0/0:16,0:16:3.65:0,4,196	1/1:4,14:19:38.52:508,39,0	1/1:3,12:17:32.60:501,33,0	1/1:6,24:32:59.23:942,59,0	0/0:26,0:26:57.12:0,57,651	0/0:31,0:31:81.22:0,81,931	0/0:21,0:21:48.12:0,48,558	0/0:5,0:5:12.02:0,12,129	0/0:28,0:28:72.13:0,72,810	0/0:19,0:19:45.11:0,45,524	0/0:22,0:22:60.10:0,60,678	0/0:21,0:21:54.15:0,54,629	0/0:12,0:12:27.07:0,27,314	0/0:41,0:41:99:0,102,1178	0/0:29,0:29:84.21:0,84,963	0/0:16,0:16:39.10:0,39,454	0/0:21,0:21:45.12:0,45,524	0/0:74,0:74:99:0,183,2109	0/0:20,0:20:51.15:0,51,593	0/0:18,0:18:45.12:0,45,517	0/0:25,0:25:66.18:0,66,769	1/1:3,0:26:52.40:185,52,0	0/0:17,0:17:39.08:0,39,434	0/0:20,0:20:51.08:0,51,575	0/0:10,0:10:27.08:0,27,315
chr10	11464639	.	G	GT	714.01	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-1.900;DP=821;FS=3.143;HRun=1;HaplotypeScore=80.7814;InbreedingCoeff=0.9994;MQ=70.59;MQ0=0;MQRankSum=-0.609;QD=32.45;ReadPosRankSum=1.567;VQSLOD=3.5005;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:66,0:66:99:0,190,2451	0/0:15,0:15:39.11:0,39,492	0/0:30,0:27:78.25:0,78,1003	0/0:30,0:28:81.25:0,81,1020	0/0:26,0:25:66.17:0,66,812	0/0:21,0:21:63.18:0,63,799	0/0:29,0:29:84.27:0,84,1089	0/0:29,0:29:84.27:0,84,1079	0/0:26,0:26:75.23:0,75,957	0/0:31,0:31:87.28:0,87,1126	0/0:19,0:19:51.17:0,51,661	0/0:41,0:41:99:0,114,1478	0/0:26,0:26:75.24:0,75,972	0/0:25,0:25:72.23:0,72,930	0/0:30,0:30:87.28:0,87,1128	0/0:31,0:31:84.23:0,84,1046	0/0:32,0:32:90.27:0,90,1151	0/0:30,0:30:87.24:0,87,1098	0/0:25,0:25:75.18:0,75,926	0/0:19,0:19:45.15:0,45,582	0/0:79,0:79:99:0,226,2888	0/0:28,0:28:75.24:0,75,973	0/0:15,0:15:42.14:0,42,545	0/0:26,0:26:69.22:0,69,894	1/1:0,21:21:54.18:809,54,0	0/0:33,0:33:96.31:0,96,1245	0/0:27,0:27:78.25:0,78,1010	0/0:10,0:10:30.10:0,30,389
chr10	11464886	.	CT	C	634.29	PASS	AB=0.840;AC=15;AF=0.268;AN=56;BaseQRankSum=3.167;DP=626;FS=2.221;HRun=16;HaplotypeScore=78.7242;InbreedingCoeff=0.1079;MQ=68.19;MQ0=2;MQRankSum=-0.369;QD=2.25;ReadPosRankSum=5.407;VQSLOD=-0.5972;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:14,28:43:27.90:386,28,0	0/1:12,2:14:3.11:3,0,182	0/0:26,0:16:14.10:0,14,72	0/1:12,1:9:4.87:5,0,39	1/1:12,18:34:32.80:191,33,0	0/1:11,7:20:1.49:80,0,1	0/1:8,6:16:9.49:50,0,9	0/1:21,1:24:2.11:2,0,63	0/0:24,2:28:9.08:0,9,258	0/1:22,3:28:2.99:3,0,247	0/0:16,1:20:4.71:0,5,144	0/0:10,0:23:15.46:0,15,94	0/0:14,2:19:8.68:0,9,191	0/0:13,0:20:6.15:0,6,29	0/0:16,0:16:30.74:0,31,240	0/0:23,2:26:12.83:0,13,223	0/1:13,4:17:9.05:9,0,150	0/0:23,2:26:17.66:0,18,331	0/0:25,0:27:29.44:0,29,322	0/1:15,3:18:4.92:5,0,160	0/1:14,3:18:15.48:15,0,115	0/0:17,0:30:50.90:0,51,341	0/0:16,1:18:12.41:0,12,206	0/0:21,0:21:38.92:0,39,319	0/0:9,0:17:12.39:0,12,56	0/1:20,1:23:9.30:9,0,109	0/0:25,1:26:13.24:0,13,194	0/1:10,3:14:29.99:30,0,121
chr10	11464986	.	TA	T	660.99	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.389;DP=684;FS=0.826;HRun=4;HaplotypeScore=78.9990;InbreedingCoeff=0.9959;MQ=87.79;MQ0=0;MQRankSum=-1.685;QD=28.74;ReadPosRankSum=2.060;VQSLOD=3.6238;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,117,1638	0/0:8,0:8:21.07:0,21,294	0/0:24,0:24:60.17:0,60,791	0/0:24,0:24:68.68:0,69,882	0/0:27,0:27:78.26:0,78,1092	0/0:15,0:15:42.14:0,42,588	0/0:27,0:27:81.26:0,81,1116	0/0:29,0:29:81.26:0,81,1105	0/0:23,0:23:69.20:0,69,919	0/0:25,0:25:72.23:0,72,991	0/0:17,0:17:45.12:0,45,610	0/0:26,0:26:75.25:0,75,1050	0/0:19,0:19:57.18:0,57,784	0/0:21,0:21:60.13:0,60,815	0/0:35,0:35:99:0,102,1428	0/0:25,0:25:75.24:0,75,1035	0/0:18,0:18:51.17:0,51,713	0/0:26,0:26:72.24:0,72,1001	0/0:20,0:20:60.20:0,60,837	0/0:30,0:30:90.30:0,90,1260	0/0:25,0:24:75.21:0,75,1028	0/0:29,0:29:78.26:0,78,1092	0/0:15,0:15:42.13:0,42,572	0/0:33,0:33:99:0,99,1384	1/1:0,23:23:63.19:756,63,0	0/0:31,0:31:93.29:0,93,1262	0/0:28,0:28:84.28:0,84,1176	0/0:22,0:22:63.21:0,63,882
chr10	11467271	.	CCCGGTCCTCAGAG	C	1286.50	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.116;DP=605;FS=5.498;HRun=0;HaplotypeScore=215.9789;InbreedingCoeff=0.9895;MQ=91.96;MQ0=0;MQRankSum=-6.299;QD=67.71;ReadPosRankSum=-0.602;VQSLOD=3.0337;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:62,0:62:99:0,181,11042	0/0:15,0:15:42.14:0,42,2532	0/0:30,0:30:81.28:0,81,4166	0/0:22,0:22:57.17:0,57,3169	0/0:17,0:17:51.18:0,51,3266	0/0:23,0:23:69.24:0,69,4259	0/0:23,0:23:69.22:0,69,3883	0/0:27,0:27:72.24:0,72,4356	0/0:19,0:19:57.20:0,57,3593	0/0:11,0:11:30.10:0,30,1609	0/0:14,0:14:39.13:0,39,2518	0/0:17,0:17:42.14:0,42,2652	0/0:9,0:9:18.06:0,18,1173	0/0:12,0:12:33.11:0,33,2117	0/0:25,0:25:69.24:0,69,4031	0/0:20,0:20:57.20:0,57,3743	0/0:36,0:36:99:0,105,6679	0/0:11,0:11:30.09:0,30,1594	0/0:18,0:18:51.17:0,51,2941	0/0:18,0:18:51.18:0,51,3046	0/0:44,0:44:99:0,126,7717	0/0:12,0:12:36.12:0,36,2262	0/0:20,0:20:54.19:0,54,3374	0/0:40,0:39:99:0,108,6764	1/1:2,17:19:41.97:1381,42,0	0/0:12,0:12:30.10:0,30,1924	0/0:19,0:19:54.19:0,54,3408	0/0:10,0:10:30.09:0,30,1405
chr10	11467847	.	CATCT	C	1099.54	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.153;DP=658;FS=7.976;HRun=0;HaplotypeScore=106.9251;InbreedingCoeff=0.9432;MQ=92.34;MQ0=0;MQRankSum=-3.048;QD=45.81;ReadPosRankSum=0.956;VQSLOD=4.0242;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,105,2975	0/0:11,0:11:33.09:0,33,891	0/0:26,0:27:80.47:0,80,2063	0/0:28,0:28:81.28:0,81,2147	0/0:16,0:16:48.15:0,48,1315	0/0:18,0:18:54.19:0,54,1490	0/0:25,0:25:75.24:0,75,2049	0/0:28,0:28:84.22:0,84,2264	0/0:19,0:19:57.18:0,57,1590	0/0:28,0:28:84.28:0,84,2377	0/0:27,0:27:81.26:0,81,2235	0/0:34,0:34:99:0,102,2916	0/0:27,0:27:81.28:0,81,2345	0/0:17,0:17:51.18:0,51,1455	0/0:28,0:28:81.28:0,81,2270	0/0:26,0:26:78.25:0,78,2198	0/0:21,0:21:63.22:0,63,1824	0/0:22,0:22:66.23:0,66,1912	0/0:25,0:25:75.26:0,75,2093	0/0:47,0:47:99:0,141,4039	0/0:26,0:26:78.22:0,78,2017	0/0:20,0:20:60.18:0,60,1654	0/0:20,0:20:60.21:0,60,1718	0/0:8,0:8:24.08:0,24,680	1/1:0,24:24:57.20:1194,57,0	0/0:24,0:24:72.25:0,72,2066	0/0:24,0:24:69.24:0,69,1999	0/0:3,0:3:9.03:0,9,261
chr10	11468305	.	AT	A	538.64	PASS	AB=0.895;AC=6;AF=0.107;AN=56;BaseQRankSum=7.860;DP=716;FS=16.395;HRun=11;HaplotypeScore=70.5838;InbreedingCoeff=0.5542;MQ=70.84;MQ0=0;MQRankSum=-0.217;QD=4.72;ReadPosRankSum=-0.572;VQSLOD=0.2116;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:46,6:52:18.56:19,0,1040	0/0:16,1:18:23.30:0,23,431	0/0:13,0:11:17.92:0,18,166	0/0:11,0:11:2.45:0,2,79	0/0:30,4:34:25.78:0,26,663	0/0:19,0:19:48.12:0,48,512	0/0:31,0:31:75.12:0,75,765	0/0:45,0:45:90.51:0,91,1138	0/0:17,0:17:20.48:0,20,412	0/0:28,1:29:41.51:0,42,634	0/0:26,2:27:28.92:0,29,718	0/0:19,0:19:48.12:0,48,511	0/0:12,0:13:35.92:0,36,366	0/0:29,2:32:37.67:0,38,747	0/0:25,2:28:50.33:0,50,696	0/0:15,0:15:42.11:0,42,448	0/1:22,3:25:4.80:5,0,550	0/0:24,1:25:35.51:0,36,583	0/0:21,2:23:11.80:0,12,521	0/0:40,0:40:99:0,108,1128	0/0:23,0:23:54.10:0,54,564	0/0:27,1:28:47.51:0,48,697	0/0:34,1:35:65.56:0,66,885	0/0:18,3:21:1.83:0,2,424	1/1:4,14:19:40.99:326,41,0	0/0:33,0:33:87.21:0,87,917	0/0:21,0:21:54.12:0,54,568	1/1:5,13:18:38.95:320,39,0
chr10	11469182	.	T	TAG	435.03	PASS	AB=1.000;AC=16;AF=0.727;AN=22;BaseQRankSum=-1.132;DP=81;FS=4.468;HRun=0;HaplotypeScore=22.0274;InbreedingCoeff=0.1448;MQ=84.36;MQ0=30;MQRankSum=0.916;QD=11.15;ReadPosRankSum=-2.318;VQSLOD=2.3787;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:20,0:4:11.45:0,11,100	0/1:16,0:8:10.63:11,0,74	./.	./.	./.	1/1:2,1:4:12:123,12,0	./.	./.	1/1:1,0:1:3.01:48,3,0	1/1:2,0:2:6.02:88,6,0	1/1:3,0:1:2.98:21,3,0	./.	./.	1/1:3,0:2:6.02:98,6,0	./.	./.	./.	0/1:3,0:2:36.48:42,0,36	./.	1/1:3,0:1:3:25,3,0	./.	0/0:1,0:1:0:0,0,0	./.	./.	1/1:2,0:2:6:73,6,0	./.
chr10	11470512	.	T	TTCTCTCTC	12195.54	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-8.643;DP=538;FS=20.288;HRun=0;HaplotypeScore=177.5391;InbreedingCoeff=0.8534;MQ=60.19;MQ0=7;MQRankSum=-5.758;QD=33.97;ReadPosRankSum=-2.468;VQSLOD=2.9644;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:25:51.17:0,51,943	1/1:7,4:11:5.71:247,6,0	1/1:20,0:13:1.25:3,1,0	0/0:17,0:11:2.16:0,2,52	0/0:6,0:17:27.98:0,28,501	0/0:9,0:20:32.78:0,33,569	0/0:4,0:15:26.96:0,27,462	0/0:20,0:35:21.54:0,22,377	1/1:4,6:11:18.06:683,18,0	1/1:22,5:27:30.10:937,30,0	1/1:15,4:20:8.99:355,9,0	1/1:11,6:18:18.06:683,18,0	1/1:15,4:21:15.05:618,15,0	1/1:12,4:17:18.06:736,18,0	1/1:7,11:20:33.11:1226,33,0	1/1:9,7:17:24.08:908,24,0	1/1:22,1:23:9.03:263,9,0	1/1:8,1:9:9.03:289,9,0	0/0:7,0:12:9.03:0,9,167	0/0:10,0:25:33.05:0,33,518	0/0:8,0:10:6.02:0,6,114	1/1:11,7:18:14.97:618,15,0	1/1:11,8:19:15.05:618,15,0	1/1:13,1:17:15.05:455,15,0	1/1:5,0:16:15.05:322,15,0	1/1:21,7:31:57.20:1757,57,0	1/1:18,5:23:30.10:1067,30,0	1/1:12,3:16:12.04:411,12,0
chr10	11473437	.	AG	A	12894.71	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=11.936;DP=620;FS=2.949;HRun=1;HaplotypeScore=64.7768;InbreedingCoeff=0.9999;MQ=92.14;MQ0=0;MQRankSum=-3.992;QD=39.31;ReadPosRankSum=4.488;VQSLOD=5.4933;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,23:23:66.18:900,66,0	1/1:0,11:11:33.11:462,33,0	0/0:31,0:31:80.04:0,80,1322	0/0:24,0:24:53.27:0,53,964	1/1:0,25:25:75.25:1048,75,0	0/0:21,0:21:57.13:0,57,880	0/0:24,0:24:66.16:0,66,1024	0/0:26,0:26:78.26:0,78,1225	1/1:0,23:23:66.18:899,66,0	1/1:1,31:32:91.51:1221,92,0	1/1:0,15:15:42.05:543,42,0	0/0:17,0:17:48.16:0,48,766	0/0:12,0:12:35.95:0,36,513	0/0:19,0:19:54.11:0,54,817	1/1:0,21:21:60.20:838,60,0	1/1:0,21:21:60.20:839,60,0	1/1:0,23:23:63.21:881,63,0	1/1:0,26:26:69.19:943,69,0	0/0:17,0:17:51.17:0,51,794	0/0:29,0:29:87.30:0,87,1391	0/0:21,0:21:60.14:0,60,929	0/0:31,0:31:90.28:0,90,1393	1/1:0,23:23:66.22:923,66,0	1/1:0,12:12:33.08:440,33,0	0/0:20,0:20:60.20:0,60,956	1/1:0,21:21:63.21:881,63,0	1/1:0,29:29:84.24:1152,84,0	1/1:0,23:23:66.22:923,66,0
chr10	11475275	.	AGCGC	A	12059.48	PASS	AB=0.867;AC=51;AF=0.911;AN=56;BaseQRankSum=0.098;DP=455;FS=38.253;HRun=0;HaplotypeScore=121.2407;InbreedingCoeff=0.6870;MQ=62.58;MQ0=5;MQRankSum=-3.554;QD=28.78;ReadPosRankSum=2.093;VQSLOD=2.4574;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:23,1:23:33.10:475,33,0	1/1:2,1:3:6.02:102,6,0	0/0:15,0:10:26.67:0,27,413	0/0:20,0:18:41.58:0,42,560	1/1:11,4:15:30.10:466,30,0	0/1:11,0:13:20.16:233,0,20	1/1:19,0:21:8.68:481,9,0	1/1:0,21:21:63.15:896,63,0	1/1:16,10:25:60.20:887,60,0	1/1:13,2:15:42.02:603,42,0	1/1:2,4:7:12.03:164,12,0	1/1:15,7:20:51.17:835,51,0	1/1:7,6:13:35.79:566,36,0	1/1:2,14:16:18.06:331,18,0	1/1:8,1:9:18.06:281,18,0	1/1:12,3:15:39.12:617,39,0	1/1:17,2:18:42.09:583,42,0	1/1:11,0:10:27.07:351,27,0	1/1:20,0:20:14.27:459,14,0	1/1:11,0:11:16.10:189,16,0	1/1:34,0:33:20.85:335,21,0	1/1:1,10:11:15.05:274,15,0	1/1:7,7:15:15.04:200,15,0	1/1:20,3:23:38.76:548,39,0	1/1:9,0:9:15.90:337,16,0	1/1:19,6:25:72.22:1104,72,0	1/1:6,5:10:30.07:431,30,0	1/1:4,3:7:21.07:312,21,0
chr10	11475276	.	GCGCGCA	G	12547.72	PASS	AB=0.990;AC=45;AF=0.804;AN=56;BaseQRankSum=-4.145;DP=454;FS=32.251;HRun=0;HaplotypeScore=132.3980;InbreedingCoeff=0.1914;MQ=60.22;MQ0=8;MQRankSum=-3.097;QD=29.88;ReadPosRankSum=0.646;VQSLOD=2.8013;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:22:33.11:604,33,0	1/1:2,0:2:6.02:146,6,0	0/0:14,0:9:26.68:0,27,420	0/0:20,0:17:41.58:0,42,593	1/1:16,0:15:30.10:507,30,0	0/1:12,1:13:85.02:198,0,85	0/1:23,0:22:52.54:437,0,53	1/1:22,0:21:63.15:896,63,0	1/1:25,1:25:60.20:1112,60,0	1/1:15,0:15:42.05:689,42,0	1/1:7,0:7:12.04:217,12,0	1/1:21,1:20:50.27:687,50,0	1/1:13,0:13:34.70:370,35,0	1/1:15,1:16:16.94:137,17,0	1/1:8,0:8:18.06:337,18,0	1/1:15,1:15:39.12:703,39,0	1/1:19,0:18:42.07:676,42,0	1/1:11,0:10:27.09:406,27,0	0/1:21,0:20:56.37:403,0,56	0/1:11,0:11:19.92:159,0,20	0/1:34,0:33:99:271,0,248	1/1:10,1:11:14.04:122,14,0	1/1:9,5:14:15.05:314,15,0	0/1:24,0:24:49.62:666,0,50	0/1:9,0:9:10.37:318,0,10	1/1:23,1:25:72.22:1294,72,0	1/1:11,0:10:29.66:469,30,0	1/1:7,0:7:21.07:410,21,0
chr10	11475291	.	C	CAG	1316.79	PASS	AB=0.827;AC=5;AF=0.089;AN=56;BaseQRankSum=-5.356;DP=587;FS=3.704;HRun=0;HaplotypeScore=168.9048;InbreedingCoeff=0.4900;MQ=44.02;MQ0=45;MQRankSum=-0.682;QD=8.96;ReadPosRankSum=0.563;VQSLOD=3.4960;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:22:24.84:0,25,205	0/0:4,0:3:6:0,6,55	0/0:13,0:7:21.01:0,21,201	0/0:13,0:9:27.02:0,27,261	0/0:22,0:20:20.70:0,21,159	0/0:17,0:15:20.77:0,21,238	0/0:35,0:32:54.77:0,55,462	0/1:36,0:27:4.80:274,0,5	0/0:26,0:24:48.89:0,49,368	0/0:20,0:16:42.20:0,42,341	0/0:12,0:12:10.67:0,11,102	0/0:26,0:22:42.60:0,43,363	0/0:17,0:15:27.60:0,28,291	0/0:21,0:20:26.89:0,27,263	0/0:13,0:13:14.95:0,15,116	0/0:13,0:11:24.46:0,24,219	0/0:29,0:25:52.17:0,52,373	0/0:13,0:11:10.45:0,10,172	0/1:30,3:25:60.98:258,0,61	0/1:3,10:12:1.17:161,0,1	1/1:23,37:56:38.05:746,38,0	0/0:15,0:15:17.99:0,18,202	0/0:18,0:16:17.71:0,18,129	0/0:30,0:26:38.84:0,39,365	0/0:15,0:15:23.83:0,24,170	0/0:23,0:21:55.57:0,56,462	0/0:12,0:10:29.78:0,30,225	0/0:7,0:7:20.88:0,21,180
chr10	11475311	.	CACACCA	C	2726.54	PASS	AB=0.983;AC=20;AF=0.357;AN=56;BaseQRankSum=3.150;DP=623;FS=1.598;HRun=0;HaplotypeScore=163.3498;InbreedingCoeff=0.1282;MQ=35.76;MQ0=96;MQRankSum=-2.757;QD=9.53;ReadPosRankSum=-1.507;VQSLOD=2.7895;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:16:6.80:183,0,7	1/1:8,0:5:5.15:61,5,0	0/0:18,0:4:12.02:0,12,147	0/0:26,0:6:16.27:0,16,180	0/1:18,1:16:27.24:27,0,27	0/0:16,0:12:21.07:0,21,524	0/0:37,0:33:57.14:0,57,1157	0/0:42,0:26:66.22:0,66,1148	1/1:17,1:17:31.54:340,32,0	0/1:20,0:14:66.35:244,0,66	0/1:14,1:13:22.56:95,0,23	0/0:21,0:16:29.37:0,29,379	0/1:18,0:15:36.35:36,0,87	0/0:20,0:19:32.59:0,33,402	0/1:17,0:13:4.88:5,0,33	0/1:16,0:10:45.31:234,0,45	0/1:22,0:18:5.68:235,0,6	0/1:12,0:8:15.82:177,0,16	0/0:35,0:17:42.98:0,43,819	0/0:12,0:11:21.46:0,21,394	0/0:84,0:69:54.36:0,54,1480	0/0:15,0:15:16.47:0,16,262	1/1:18,1:17:23.06:229,23,0	0/1:38,0:27:99:212,0,109	0/0:10,0:9:11.78:0,12,206	0/1:21,0:15:1.18:430,0,1	0/1:9,1:8:26.69:148,0,27	1/1:8,0:8:18.04:249,18,0
chr10	11475313	.	CACCA	C	2811.33	PASS	AB=0.890;AC=19;AF=0.339;AN=56;BaseQRankSum=2.916;DP=621;FS=1.042;HRun=0;HaplotypeScore=150.8974;InbreedingCoeff=0.1230;MQ=35.22;MQ0=97;MQRankSum=-3.405;QD=10.81;ReadPosRankSum=-1.663;VQSLOD=3.1933;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:23,1:15:9.56:178,0,10	1/1:6,1:4:2.93:55,3,0	0/0:20,0:2:6:0,6,71	0/0:28,0:5:13.26:0,13,141	0/1:15,3:15:9.61:10,0,30	0/0:17,0:13:24.08:0,24,437	0/0:36,0:32:51.57:0,52,914	0/0:43,0:26:66.22:0,66,1037	1/1:11,7:17:29.55:301,30,0	0/1:20,0:14:48.48:285,0,48	0/1:10,4:12:24.80:117,0,25	0/0:21,0:16:32.42:0,32,336	0/0:18,0:15:3.59:0,4,105	0/0:20,0:19:32.09:0,32,349	0/1:15,1:12:7.79:8,0,30	0/1:13,3:10:45.31:241,0,45	0/1:21,1:18:4.32:240,0,4	0/1:12,0:8:15.65:216,0,16	0/0:36,0:17:42.35:0,42,683	0/0:12,0:11:20.98:0,21,324	0/0:86,0:71:54.06:0,54,1176	0/0:14,0:14:21:0,21,255	1/1:13,5:16:21.65:207,22,0	0/1:34,3:27:81.88:257,0,82	0/0:10,0:9:11.77:0,12,149	0/1:14,5:13:6.82:393,0,7	0/1:7,4:9:23.54:214,0,24	1/1:5,3:8:18.06:265,18,0
chr10	11475315	.	CCA	C	1950.15	PASS	AB=0.928;AC=17;AF=0.304;AN=56;BaseQRankSum=2.749;DP=633;FS=3.333;HRun=0;HaplotypeScore=145.2578;InbreedingCoeff=0.1441;MQ=34.75;MQ0=104;MQRankSum=-2.016;QD=8.41;ReadPosRankSum=-0.260;VQSLOD=3.3683;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:21,4:16:11.51:152,0,12	1/1:7,1:5:2.93:39,3,0	0/0:21,0:2:6:0,6,71	0/0:30,0:5:13.26:0,13,134	0/0:10,7:14:3.01:0,3,36	0/0:17,0:13:20.93:0,21,273	0/0:37,0:33:43.56:0,44,565	0/0:45,0:28:72.23:0,72,1050	1/1:16,1:17:14.94:195,15,0	0/1:19,1:14:48.16:189,0,48	0/1:14,0:12:24.51:79,0,25	0/0:21,0:16:33.05:0,33,417	0/0:17,0:14:3.61:0,4,132	0/0:20,0:19:36.33:0,36,421	0/0:13,2:12:3:0,3,36	0/1:16,0:10:45.81:178,0,46	0/1:21,1:18:8.64:170,0,9	0/1:8,2:8:18.14:152,0,18	0/0:34,0:16:36.12:0,36,529	0/0:13,0:11:20.98:0,21,269	0/0:87,0:72:53.88:0,54,862	0/0:15,0:15:20.10:0,20,290	1/1:15,3:16:13.44:132,13,0	0/1:33,3:26:57.19:145,0,57	0/0:7,0:8:11.80:0,12,107	0/1:19,3:14:14.62:312,0,15	0/1:10,1:9:23.54:183,0,24	1/1:7,1:8:17.64:196,18,0
chr10	11475316	.	CA	C	87.38	PASS	AB=0.985;AC=10;AF=0.179;AN=56;BaseQRankSum=4.148;DP=635;FS=6.171;HRun=1;HaplotypeScore=149.0660;InbreedingCoeff=-0.0469;MQ=34.59;MQ0=104;MQRankSum=-1.586;QD=0.58;ReadPosRankSum=3.013;VQSLOD=-0.7190;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:24,1:16:36.97:63,0,37	1/1:9,0:5:1.95:5,2,0	0/0:24,0:2:6.02:0,6,93	0/0:30,0:5:14.75:0,15,165	0/0:16,0:13:3.01:0,3,38	0/0:16,0:13:24.08:0,24,340	0/0:35,0:31:49.06:0,49,666	0/0:47,0:30:72.24:0,72,1123	0/1:18,0:17:1.75:10,0,2	0/0:19,0:13:6.41:0,6,167	0/0:14,0:12:1.11:0,1,74	0/0:21,0:16:33.03:0,33,471	0/0:18,0:15:17.65:0,18,234	0/0:20,0:19:36.67:0,37,483	0/0:16,0:12:4.56:0,5,52	0/1:16,0:10:12.30:12,0,64	0/1:20,2:18:50.15:50,0,137	0/0:12,0:8:9.09:0,9,133	0/0:35,0:16:29.36:0,29,547	0/0:13,0:11:20.83:0,21,274	0/0:85,0:71:53.61:0,54,853	0/0:15,0:15:19.67:0,20,283	0/1:18,0:16:11.42:11,0,26	0/0:37,1:27:10.83:0,11,172	0/0:10,0:9:10.65:0,11,79	0/1:24,0:15:36.17:36,0,37	0/1:11,0:9:11.92:12,0,36	0/1:8,0:8:16.30:18,0,16
chr10	11475343	.	CCA	C	1753.37	PASS	AB=0.919;AC=35;AF=0.648;AN=54;BaseQRankSum=-1.606;DP=651;FS=4.383;HRun=0;HaplotypeScore=122.2505;InbreedingCoeff=-0.1237;MQ=30.69;MQ0=124;MQRankSum=1.940;QD=3.57;ReadPosRankSum=1.734;VQSLOD=2.1995;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:25,3:15:27.04:27,0,65	1/1:10,1:8:5.92:38,6,0	0/0:40,0:3:3.01:0,3,37	0/0:49,0:6:6.02:0,6,78	0/1:11,3:11:29.54:30,0,31	0/1:11,0:10:16.49:16,0,30	0/1:38,0:32:28.31:28,0,63	0/1:38,3:29:33.61:156,0,34	1/1:11,5:13:11.40:135,11,0	1/1:19,3:12:23.89:246,24,0	1/1:10,1:9:3:36,3,0	0/1:22,0:17:20.76:43,0,21	1/1:16,1:14:8.79:56,9,0	1/1:14,0:14:8.92:48,9,0	./.	0/1:15,2:13:27.84:88,0,28	1/1:15,3:15:14.80:159,15,0	1/1:15,1:10:14.19:156,14,0	0/1:23,0:13:49:61,0,49	1/1:12,0:10:9.02:100,9,0	0/1:74,1:63:21.78:22,0,112	0/0:10,0:10:3.01:0,3,34	1/1:11,4:12:5.90:72,6,0	0/0:43,2:33:0.76:0,1,2	1/1:13,2:12:2.99:36,3,0	0/1:20,4:13:49.12:165,0,49	0/1:10,1:9:26.35:90,0,26	1/1:7,2:8:9.02:100,9,0
chr10	11475358	.	CACACCACA	C	831.05	PASS	AB=0.928;AC=11;AF=0.196;AN=56;BaseQRankSum=-1.603;DP=667;FS=6.806;HRun=0;HaplotypeScore=130.8720;InbreedingCoeff=0.1043;MQ=28.73;MQ0=166;MQRankSum=-0.785;QD=4.33;ReadPosRankSum=0.507;VQSLOD=1.4168;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:14:14.97:0,15,195	0/0:12,0:7:6.60:0,7,32	0/0:19,0:1:3.01:0,3,69	0/0:29,0:2:6.02:0,6,139	0/0:17,0:12:9.03:0,9,151	0/1:15,0:9:86:118,0,86	0/1:23,15:31:66.55:67,0,252	0/0:31,0:19:20.36:0,20,141	0/0:25,0:17:19.16:0,19,277	0/1:27,0:15:58.30:58,0,111	0/0:15,0:9:5.50:0,6,43	0/1:23,0:18:51.11:257,0,51	1/1:14,7:16:9.84:200,10,0	1/1:13,0:14:11.67:181,12,0	0/0:17,0:9:0.89:0,1,3	0/0:19,0:12:16.98:0,17,191	0/0:22,0:18:10.51:0,11,217	0/1:18,0:11:72.11:72,0,92	0/0:16,0:11:18.76:0,19,213	0/0:17,0:13:10.70:0,11,51	0/0:77,0:60:18.20:0,18,410	0/0:13,3:12:4.83:0,5,67	0/1:15,0:13:5.49:8,0,5	0/0:46,0:34:14.15:0,14,147	0/0:23,0:15:2.41:0,2,9	0/0:31,0:17:3.55:0,4,340	0/1:12,0:6:16.62:17,0,141	0/0:12,0:10:11.75:0,12,72
chr10	11475360	.	CACCA	C	2318.16	PASS	AB=0.963;AC=34;AF=0.607;AN=56;BaseQRankSum=-2.538;DP=653;FS=6.204;HRun=0;HaplotypeScore=109.4136;InbreedingCoeff=-0.2417;MQ=29.00;MQ0=160;MQRankSum=1.630;QD=4.03;ReadPosRankSum=1.805;VQSLOD=1.7576;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:14:26.57:27,0,66	1/1:10,1:7:5.92:39,6,0	0/0:17,0:1:3.01:0,3,37	0/0:28,0:2:6.02:0,6,78	0/1:17,0:12:31.45:32,0,31	0/1:15,0:9:13.86:14,0,45	0/1:38,0:31:30.35:30,0,99	0/1:31,0:19:36.44:154,0,36	0/1:23,1:17:20.45:127,0,20	1/1:25,2:16:28.14:407,28,0	1/1:13,0:7:4.35:40,4,0	0/1:26,0:17:33.76:127,0,34	1/1:21,0:16:8.56:86,9,0	1/1:15,0:13:8.92:48,9,0	0/0:18,0:9:0:0,0,0	0/1:19,0:12:34.17:79,0,34	0/1:22,0:18:10.33:222,0,10	1/1:19,0:13:12.57:213,13,0	0/1:15,0:11:48.94:60,0,49	1/1:16,0:12:8.88:99,9,0	0/1:74,0:59:18.13:18,0,192	0/0:15,0:12:3.01:0,3,35	1/1:13,0:12:5.80:72,6,0	0/1:25,20:35:12.90:13,0,24	1/1:23,0:15:3:36,3,0	0/1:28,1:15:99:257,0,128	0/1:12,1:7:30.91:115,0,31	1/1:10,1:9:11.21:162,11,0
chr10	11475396	.	A	AC	1094.79	PASS	AB=0.983;AC=16;AF=0.286;AN=56;BaseQRankSum=1.429;DP=653;FS=1.217;HRun=1;HaplotypeScore=121.7651;InbreedingCoeff=-0.1987;MQ=34.51;MQ0=125;MQRankSum=-0.331;QD=3.35;ReadPosRankSum=-1.432;VQSLOD=-0.4406;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,1:14:13.24:0,13,133	0/1:9,0:5:2.54:13,0,3	0/0:10,0:2:5.97:0,6,57	0/0:14,0:4:8.06:0,8,82	0/0:16,0:12:9.79:0,10,39	0/1:14,3:12:6.58:150,0,7	0/1:32,2:24:94.63:95,0,135	0/0:33,0:16:9.64:0,10,174	0/1:28,0:20:1.83:2,0,134	0/1:34,0:25:99:133,0,177	0/0:14,0:10:7.13:0,7,70	0/1:30,1:21:39:243,0,39	0/1:24,0:21:47.97:147,0,48	0/1:15,0:14:25.06:80,0,25	0/0:16,0:12:3.86:0,4,20	0/0:24,0:18:17.93:0,18,96	0/0:24,0:20:31.41:0,31,162	0/1:26,0:22:88.68:89,0,95	0/1:19,0:13:15.82:16,0,123	0/1:11,0:9:14.91:26,0,15	0/0:60,0:39:5.28:0,5,77	1/1:22,0:20:17.78:202,18,0	0/0:16,0:13:9.11:0,9,30	0/0:53,0:44:10.98:0,11,108	0/0:23,0:16:7.27:0,7,32	0/1:28,0:19:21.62:22,0,216	0/1:19,0:12:24.73:25,0,111	0/1:9,0:8:7.33:7,0,47
chr10	11475400	.	AC	A	2135.51	PASS	AB=0.885;AC=34;AF=0.607;AN=56;BaseQRankSum=-0.158;DP=672;FS=2.332;HRun=2;HaplotypeScore=116.0303;InbreedingCoeff=-0.3092;MQ=35.81;MQ0=120;MQRankSum=5.330;QD=3.49;ReadPosRankSum=2.380;VQSLOD=0.6729;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:16:22.28:22,0,70	1/1:8,2:6:5.21:73,5,0	0/0:13,0:4:11.25:0,11,116	0/0:19,0:8:20.54:0,21,210	1/1:13,1:10:12.66:48,13,0	1/1:11,7:13:21:238,21,0	0/1:27,7:24:99:131,0,161	0/1:30,5:18:99:132,0,126	0/0:26,2:20:2.55:0,3,42	0/1:37,0:28:99:113,0,168	0/1:14,0:10:10.28:10,0,30	0/1:24,5:19:32.48:252,0,32	0/1:15,9:21:30:211,0,30	0/1:10,6:15:16.27:136,0,16	1/1:16,0:12:1.60:10,2,0	1/1:25,1:20:2.51:57,3,0	0/1:24,2:22:26.87:29,0,27	0/1:25,2:24:99:102,0,116	0/1:15,6:14:97.33:147,0,97	1/1:6,6:10:6.01:66,6,0	0/1:44,15:39:27.46:27,0,78	1/1:18,4:20:14.63:192,15,0	1/1:14,2:13:6.54:20,7,0	0/1:47,2:41:30.73:31,0,41	1/1:14,10:17:8.08:134,8,0	0/1:30,0:21:59.79:60,0,196	0/1:19,1:14:35.18:35,0,122	0/1:6,2:8:10.07:23,0,10
chr10	11475493	.	AGTGGGAAATT	A	8921.91	PASS	AC=28;AF=0.519;AN=54;BaseQRankSum=12.082;DP=443;FS=7.393;HRun=0;HaplotypeScore=159.0301;InbreedingCoeff=0.9707;MQ=94.38;MQ0=2;MQRankSum=-11.682;QD=57.19;ReadPosRankSum=1.306;VQSLOD=4.4106;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,14:16:33.08:964,33,0	1/1:1,12:13:33.11:1039,33,0	0/0:23,0:22:49.03:0,49,1868	0/0:30,0:30:66.19:0,66,2793	./.	0/0:19,0:18:45.15:0,45,2271	0/0:24,0:23:63.22:0,63,3119	0/0:33,0:33:84.29:0,84,4291	1/1:1,5:5:12.04:378,12,0	1/1:1,9:10:27.09:748,27,0	1/1:2,8:10:21.07:656,21,0	0/0:17,0:17:42.14:0,42,2154	0/0:21,0:21:60.21:0,60,3074	0/0:12,0:12:33.11:0,33,1574	1/1:3,7:10:15.05:472,15,0	1/1:2,10:12:24.08:748,24,0	1/1:5,7:12:18.06:565,18,0	1/1:7,6:12:15.05:473,15,0	0/0:19,0:19:51.16:0,51,2244	0/0:10,0:10:30.10:0,30,1542	0/0:40,0:39:99:0,99,5013	0/0:16,0:16:48.15:0,48,2319	1/1:0,6:6:15.05:470,15,0	1/1:11,4:14:9.50:227,9,0	0/0:16,0:15:36.12:0,36,1851	1/1:1,12:13:36.09:956,36,0	1/1:2,13:15:30.10:942,30,0	1/1:2,3:5:9.03:283,9,0
chr10	11476318	.	TAC	T	13595.03	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=16.114;DP=641;FS=2.472;HRun=0;HaplotypeScore=86.8648;InbreedingCoeff=0.9994;MQ=81.74;MQ0=0;MQRankSum=-1.114;QD=40.58;ReadPosRankSum=5.385;VQSLOD=6.9588;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,31:31:75.25:1148,75,0	1/1:0,7:7:21.07:322,21,0	0/0:13,0:13:39.13:0,39,739	0/0:20,0:20:56.86:0,57,1043	1/1:1,36:37:96.33:1470,96,0	0/0:28,0:28:81.28:0,81,1555	0/0:19,0:19:57.20:0,57,1084	0/0:38,0:38:99:0,111,2100	1/1:0,19:19:54.18:827,54,0	1/1:1,33:34:99:1513,99,0	1/1:2,19:21:51.17:780,51,0	0/0:21,0:21:63.20:0,63,1183	0/0:24,0:24:72.25:0,72,1372	0/0:23,0:23:69.24:0,69,1324	1/1:0,27:27:78.26:1195,78,0	1/1:2,16:18:45.15:689,45,0	1/1:0,26:26:63.21:965,63,0	1/1:0,18:18:45.15:689,45,0	0/0:26,0:26:78.27:0,78,1491	0/0:23,0:23:69.24:0,69,1321	0/0:21,0:21:63.22:0,63,1196	0/0:24,0:24:72.25:0,72,1362	1/1:0,21:21:56.95:873,57,0	1/1:0,13:13:36.12:551,36,0	0/0:26,0:26:78.27:0,78,1507	1/1:1,23:24:66.22:1011,66,0	1/1:1,24:25:66.22:1010,66,0	1/1:0,14:14:36.12:551,36,0
chr10	11479847	.	T	TA	1339.77	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-6.605;DP=416;FS=0.591;HRun=8;HaplotypeScore=42.4837;InbreedingCoeff=0.9845;MQ=88.21;MQ0=0;MQRankSum=0.718;QD=22.33;ReadPosRankSum=-0.550;VQSLOD=3.2645;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:33.02:0,33,302	0/0:6,0:6:18.01:0,18,165	0/0:23,0:22:41.45:0,41,357	0/0:12,0:12:21.01:0,21,191	0/0:17,0:17:45.02:0,45,412	0/0:13,0:13:33.01:0,33,302	0/0:8,0:8:21.01:0,21,192	0/0:26,0:26:63:0,63,572	0/0:12,0:12:33.02:0,33,302	0/0:16,0:16:45.02:0,45,411	0/0:14,0:14:36.02:0,36,329	1/1:5,12:17:27.08:312,27,0	1/1:3,12:15:39.12:450,39,0	1/1:1,12:13:24.07:274,24,0	0/0:19,0:19:57.03:0,57,522	0/0:4,0:4:12.01:0,12,110	0/0:22,0:22:60:0,60,542	0/0:14,0:14:36.01:0,36,329	0/0:13,0:13:23.99:0,24,220	0/0:20,0:20:54.03:0,54,494	0/0:9,0:9:24.01:0,24,220	1/1:1,13:15:41.96:465,42,0	0/0:16,0:16:48.02:0,48,438	0/0:12,0:12:36.02:0,36,329	0/0:17,0:17:47.90:0,48,427	0/0:19,0:19:57.01:0,57,515	0/0:17,0:16:44.98:0,45,401	0/0:14,0:14:42.02:0,42,384
chr10	11480707	.	TACAC	T	13429.54	PASS	AB=0.703;AC=43;AF=0.768;AN=56;BaseQRankSum=-9.538;DP=854;FS=17.541;HRun=0;HaplotypeScore=188.7556;InbreedingCoeff=0.6344;MQ=53.37;MQ0=11;MQRankSum=1.989;QD=19.16;ReadPosRankSum=3.937;VQSLOD=3.3215;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:31,17:47:34.74:991,35,0	1/1:6,3:9:16.30:244,16,0	0/0:22,0:5:2.50:0,2,9	0/0:16,0:6:3.85:0,4,22	1/1:9,16:25:32.03:377,32,0	1/1:15,12:27:33.93:606,34,0	1/1:13,22:33:19.34:388,19,0	0/0:21,1:23:27.53:0,28,151	1/1:19,21:39:16.81:379,17,0	0/1:30,9:37:99:632,0,147	1/1:13,6:19:13.96:335,14,0	1/1:31,10:40:50.16:811,50,0	1/1:21,13:33:65.27:978,65,0	1/1:19,10:30:22.25:475,22,0	1/1:29,22:50:95.78:1415,96,0	1/1:27,7:30:48.02:688,48,0	1/1:17,14:31:24.85:826,25,0	1/1:23,14:37:81:1180,81,0	0/0:14,0:17:25.29:0,25,130	0/1:5,2:23:55.85:56,0,138	0/0:45,2:65:17.15:0,17,462	1/1:20,4:24:12.01:194,12,0	1/1:18,3:22:19.30:341,19,0	1/1:35,20:52:75.97:1139,76,0	0/1:11,1:15:4.34:4,0,43	1/1:21,8:28:43.46:582,43,0	1/1:5,13:17:33.11:540,33,0	1/1:1,5:6:15.05:246,15,0
chr10	11480743	.	TAC	T	150.77	PASS	AB=0.992;AC=5;AF=0.093;AN=54;BaseQRankSum=6.376;DP=1048;FS=11.241;HRun=0;HaplotypeScore=256.2629;InbreedingCoeff=0.2834;MQ=46.86;MQ0=39;MQRankSum=-7.535;QD=0.86;ReadPosRankSum=-0.504;VQSLOD=1.1212;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:48,1:47:61.48:0,61,1389	0/0:16,0:15:14.84:0,15,453	0/0:11,0:2:5.69:0,6,48	./.	0/0:24,0:24:36.26:0,36,554	0/0:30,0:28:19.90:0,20,124	0/0:36,0:34:6.98:0,7,47	0/0:56,0:29:64.40:0,64,903	0/1:35,0:35:60.35:60,0,592	0/0:52,0:46:99:0,111,1627	0/0:24,0:23:54.18:0,54,870	0/0:48,0:45:77.65:0,78,1100	0/0:46,0:44:86.42:0,86,1300	0/0:40,0:40:52.34:0,52,962	0/1:80,0:75:14.45:14,0,2287	0/1:40,1:34:37.79:38,0,963	0/0:52,0:49:81.83:0,82,1405	0/0:44,0:43:88.91:0,89,1284	0/0:28,0:16:35.43:0,35,450	0/0:24,0:22:46.48:0,46,806	0/0:98,0:85:99:0,186,2827	0/0:28,0:26:48.10:0,48,734	0/0:23,0:23:10.64:0,11,653	0/0:47,0:43:77.17:0,77,1411	1/1:7,12:16:14.78:157,15,0	0/0:42,0:38:66.42:0,66,1242	0/0:24,0:24:63.21:0,63,991	0/0:9,0:9:21.05:0,21,303
chr10	11480815	.	TAC	T	2451.37	PASS	AB=0.760;AC=5;AF=0.096;AN=52;BaseQRankSum=11.528;DP=1360;FS=0.376;HRun=0;HaplotypeScore=266.1272;InbreedingCoeff=-0.1021;MQ=44.17;MQ0=104;MQRankSum=-7.306;QD=9.46;ReadPosRankSum=1.712;VQSLOD=3.0543;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:55,2:55:43.89:0,44,1454	0/0:22,0:19:36.12:0,36,604	./.	./.	0/0:29,0:25:47.98:0,48,745	0/0:39,0:37:88.19:0,88,1498	0/0:62,0:51:99:0,114,1881	0/0:79,0:37:80.44:0,80,1106	0/0:63,0:62:99:0,112,1745	0/0:74,1:57:99:0,135,2242	0/0:37,0:35:56.46:0,56,851	0/1:34,27:56:99:782,0,318	0/1:26,25:47:99:654,0,213	0/1:28,18:43:99:536,0,274	0/0:96,0:90:99:0,209,3319	0/0:56,0:48:35.28:0,35,459	0/0:61,1:58:95.23:0,95,2238	0/1:38,0:36:6.51:7,0,363	0/0:30,0:14:37:0,37,599	0/0:28,0:23:60.20:0,60,999	0/0:111,0:91:99:0,185,3133	0/1:38,24:51:99:585,0,128	0/0:33,0:30:51.07:0,51,817	0/0:67,0:64:99:0,108,1716	0/0:22,0:19:33.10:0,33,541	0/0:53,0:41:99:0,108,1816	0/0:33,0:32:89.11:0,89,1478	0/0:16,0:15:36.12:0,36,590
chr10	11480823	.	CAT	C	1826.23	PASS	AB=0.980;AC=7;AF=0.135;AN=52;BaseQRankSum=14.553;DP=1344;FS=7.734;HRun=0;HaplotypeScore=271.3982;InbreedingCoeff=0.1805;MQ=43.93;MQ0=103;MQRankSum=-7.724;QD=6.07;ReadPosRankSum=1.377;VQSLOD=1.7179;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:62,0:60:80.25:0,80,1639	0/0:22,0:19:39.12:0,39,660	./.	./.	0/0:27,0:24:47.97:0,48,791	0/0:39,0:37:83.98:0,84,1510	0/0:62,0:52:99:0,123,2055	0/0:76,0:32:65.02:0,65,1169	0/0:63,0:62:99:0,110,2067	0/0:71,0:54:99:0,138,2272	0/0:35,0:33:40.93:0,41,792	0/1:59,0:55:36.76:362,0,37	0/1:52,0:48:15.30:360,0,15	0/1:42,1:40:86.16:310,0,86	0/0:96,0:91:99:0,153,3474	0/1:50,0:43:99:374,0,221	0/0:61,0:57:99:0,102,2448	0/1:33,3:35:99:210,0,238	0/0:32,0:14:37.01:0,37,690	0/0:29,1:24:66.09:0,66,1088	0/0:111,1:91:99:0,164,3178	1/1:58,2:48:22.08:345,22,0	0/0:32,0:29:52.13:0,52,774	0/0:64,0:61:99:0,112,1859	0/0:21,0:19:33.11:0,33,600	0/0:50,0:38:99:0,101,1840	0/0:38,0:37:90.38:0,90,1699	0/0:15,0:14:36.12:0,36,684
chr10	11480825	.	TAC	T	1382.93	PASS	AB=0.920;AC=6;AF=0.115;AN=52;BaseQRankSum=12.222;DP=1330;FS=13.329;HRun=0;HaplotypeScore=272.8947;InbreedingCoeff=-0.1305;MQ=44.03;MQ0=100;MQRankSum=-9.874;QD=4.69;ReadPosRankSum=-0.893;VQSLOD=1.2311;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:61,0:59:87.03:0,87,1479	0/0:22,0:19:36.11:0,36,570	./.	./.	0/0:27,0:24:48.15:0,48,783	0/0:39,0:37:61.46:0,61,1306	0/0:61,0:51:99:0,108,1770	0/0:71,1:27:30.27:0,30,1006	0/0:67,0:66:99:0,126,1986	0/0:70,0:54:99:0,120,1863	0/0:36,0:34:42.01:0,42,641	0/1:57,0:53:25.30:25,0,143	0/1:49,0:45:93.40:93,0,113	0/1:43,0:40:48.91:49,0,97	0/0:93,0:88:99:0,198,3078	0/1:29,22:44:99:860,0,156	0/0:59,1:56:90.85:0,91,2133	0/1:29,8:35:99:398,0,226	0/0:30,0:14:27.67:0,28,601	0/0:29,0:23:59.75:0,60,958	0/0:112,1:94:99:0,138,2926	0/1:58,0:46:67.65:80,0,68	0/0:32,0:29:40.21:0,40,629	0/0:64,1:62:99:0,108,1733	0/0:20,0:18:33.11:0,33,547	0/0:50,0:39:93.30:0,93,1541	0/0:37,0:36:70.84:0,71,1510	0/0:15,0:14:36.12:0,36,592
chr10	11480855	.	AACACACATAC	A	4598.24	PASS	AB=0.898;AC=8;AF=0.154;AN=52;BaseQRankSum=4.071;DP=1252;FS=3.764;HRun=0;HaplotypeScore=403.3379;InbreedingCoeff=0.4394;MQ=44.54;MQ0=90;MQRankSum=-8.692;QD=19.65;ReadPosRankSum=-2.513;VQSLOD=1.9590;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:53:75.17:0,75,1903	0/0:23,0:20:30.10:0,30,814	./.	./.	0/0:31,0:25:45.15:0,45,1187	0/0:36,0:35:69.22:0,69,2424	0/0:52,0:49:96.31:0,96,3054	0/0:64,0:25:45.12:0,45,1123	0/0:69,0:68:99:0,118,2957	0/0:62,0:54:43.74:0,44,2488	0/0:31,0:30:48.16:0,48,1156	1/1:31,12:42:72.03:1266,72,0	0/1:34,16:48:99:1761,0,155	1/1:24,15:36:45.15:924,45,0	0/0:80,0:76:99:0,120,3124	0/1:35,0:30:2.90:3,0,76	0/0:52,0:49:60.39:0,60,2342	0/1:27,0:26:47.47:47,0,155	0/0:39,0:14:33.10:0,33,1101	0/0:31,0:28:54.18:0,54,2081	0/0:118,0:96:99:0,183,6330	0/1:32,8:33:99:596,0,246	0/0:35,0:32:57.11:0,57,1429	0/0:74,0:72:99:0,102,2517	0/0:28,0:28:63.22:0,63,1829	0/0:51,0:39:81.28:0,81,2027	0/0:35,0:34:87.30:0,87,2266	0/0:18,0:18:42.14:0,42,1287
chr10	11480873	.	TAC	T	12267.86	PASS	AB=0.944;AC=29;AF=0.518;AN=56;BaseQRankSum=9.302;DP=1132;FS=11.740;HRun=0;HaplotypeScore=188.5407;InbreedingCoeff=0.7828;MQ=47.15;MQ0=71;MQRankSum=4.699;QD=19.57;ReadPosRankSum=9.389;VQSLOD=3.4820;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:15,40:52:78.14:970,78,0	1/1:1,16:16:27.09:350,27,0	0/0:40,0:8:18.06:0,18,296	0/0:27,0:3:9.01:0,9,106	1/1:3,27:26:30.50:452,30,0	0/0:29,0:27:69.19:0,69,1057	0/0:47,0:45:99:0,105,1635	0/0:63,0:38:99:0,108,1674	1/1:14,47:61:99:1281,102,0	1/1:15,35:43:98.72:1254,99,0	1/1:2,22:23:47.94:580,48,0	0/0:41,0:40:4.42:0,4,383	0/1:46,0:44:7.56:8,0,385	0/1:26,0:23:1.14:1,0,101	1/1:14,54:66:99:1371,107,0	0/0:14,1:14:3.01:0,3,38	1/1:23,23:43:66.91:1253,67,0	0/1:12,3:15:7.90:134,0,8	0/0:45,0:21:51.17:0,51,830	0/0:30,0:28:72.24:0,72,1182	0/0:103,1:94:99:0,163,3351	0/0:34,0:29:23.06:0,23,255	1/1:7,23:28:44.54:635,45,0	1/1:10,50:59:99:1287,99,0	0/0:30,0:30:68.90:0,69,1036	1/1:11,34:39:99:1234,99,0	1/1:6,26:32:47.90:942,48,0	1/1:1,20:21:16.04:517,16,0
chr10	11480897	.	CAT	C	197.79	PASS	AB=0.975;AC=6;AF=0.107;AN=56;BaseQRankSum=7.843;DP=1118;FS=4.661;HRun=0;HaplotypeScore=219.3930;InbreedingCoeff=0.2659;MQ=48.18;MQ0=57;MQRankSum=-5.386;QD=1.56;ReadPosRankSum=-1.701;VQSLOD=1.6740;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:53:99:0,99,1770	0/0:16,0:15:33.11:0,33,616	0/0:55,2:13:36.12:0,36,636	0/0:44,0:10:23.89:0,24,293	0/0:33,0:29:29.52:0,30,1211	0/0:26,0:23:63.15:0,63,1152	0/0:40,0:40:99:0,102,1862	0/0:70,1:57:99:0,162,2936	0/0:49,0:49:99:0,114,2091	0/0:39,0:38:99:0,108,1977	0/0:24,0:23:48.16:0,48,886	0/0:46,0:45:62.47:0,62,1230	0/1:46,0:42:3.96:4,0,1172	0/0:33,0:30:32.32:0,32,639	0/0:69,0:66:39:0,39,2335	1/1:11,4:15:20.56:179,21,0	0/0:40,0:39:94.87:0,95,1669	0/1:8,1:9:30.21:92,0,30	0/0:33,0:22:52.40:0,52,949	0/0:30,0:30:87.23:0,87,1632	0/0:102,2:98:99:0,130,4452	0/1:29,0:26:34.08:34,0,796	0/0:27,0:26:20.37:0,20,917	0/0:57,0:57:99:0,126,2304	0/1:28,0:28:12.88:13,0,1160	0/0:47,0:42:99:0,123,2189	0/0:28,0:28:72.22:0,72,1256	0/0:21,0:21:8.21:0,8,778
chr10	11480913	.	AAC	A	757.75	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=3.584;DP=1141;FS=3.414;HRun=0;HaplotypeScore=208.6256;InbreedingCoeff=0.9964;MQ=48.39;MQ0=43;MQRankSum=-1.657;QD=22.29;ReadPosRankSum=-3.838;VQSLOD=3.0362;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:59,0:56:99:0,102,1637	0/0:20,0:19:39.03:0,39,563	0/0:54,0:11:24.05:0,24,379	0/0:47,0:11:29.99:0,30,476	0/0:34,0:30:72.23:0,72,1166	0/0:28,0:25:65.81:0,66,1076	0/0:41,0:40:96.25:0,96,1538	0/0:68,0:52:99:0,123,2016	0/0:47,0:47:93.30:0,93,1539	0/0:38,0:37:99:0,102,1752	0/0:19,0:19:51.17:0,51,824	0/0:51,0:49:96.33:0,96,1626	0/0:47,0:44:77.86:0,78,1392	0/0:36,0:33:41.49:0,41,677	0/0:73,0:70:92.49:0,92,1991	1/1:9,14:23:56.94:641,57,0	0/0:33,0:33:86.97:0,87,1476	1/1:8,3:10:20.77:237,21,0	0/0:27,0:19:45.14:0,45,749	0/0:29,0:29:84.27:0,84,1442	0/0:110,0:102:99:0,269,4454	0/0:30,0:28:63.18:0,63,1000	0/0:23,0:23:46.40:0,46,743	0/0:57,0:57:99:0,117,1974	0/0:29,0:28:78.27:0,78,1322	0/0:60,0:54:99:0,157,2697	0/0:25,0:25:50.85:0,51,813	0/0:22,0:22:51.08:0,51,747
chr10	11480919	.	CAT	C	206.12	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.800;DP=1120;FS=16.681;HRun=0;HaplotypeScore=204.8509;InbreedingCoeff=0.9824;MQ=48.98;MQ0=37;MQRankSum=-4.412;QD=5.73;ReadPosRankSum=-3.140;VQSLOD=1.2080;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:55:93.32:0,93,1761	0/0:18,0:17:39.12:0,39,670	0/0:50,0:14:27.94:0,28,394	0/0:45,0:12:29.14:0,29,484	0/0:34,0:30:69.22:0,69,1260	0/0:29,0:26:64.45:0,64,1193	0/0:42,0:41:99:0,102,1609	0/0:56,0:47:99:0,127,1963	0/0:44,0:44:93.21:0,93,1613	0/0:40,0:39:99:0,114,1908	0/0:17,0:17:51.17:0,51,959	0/0:51,0:49:99:0,99,1845	0/0:48,0:45:73.37:0,73,1529	0/0:33,0:31:27.26:0,27,781	0/0:67,8:73:56.05:0,56,2185	1/1:23,1:24:23.44:228,23,0	0/0:38,0:38:89.96:0,90,1648	1/1:12,0:11:12.35:94,12,0	0/0:25,0:17:42.14:0,42,788	0/0:30,0:30:84.26:0,84,1524	0/0:110,0:102:99:0,260,4652	0/0:29,0:28:63.05:0,63,1127	0/0:23,0:23:51.56:0,52,889	0/0:58,0:58:99:0,120,2104	0/0:30,0:29:81.22:0,81,1469	0/0:61,0:58:99:0,168,2918	0/0:22,0:22:44.16:0,44,759	0/0:17,0:17:39.08:0,39,655
chr10	11480952	.	TCA	T	2759.11	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=7.888;DP=1107;FS=1.381;HRun=0;HaplotypeScore=179.9338;InbreedingCoeff=0.9743;MQ=48.95;MQ0=45;MQRankSum=-2.545;QD=15.95;ReadPosRankSum=3.234;VQSLOD=3.8024;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:56:93.20:0,93,1490	0/0:14,0:13:30.10:0,30,499	0/0:56,0:11:8.22:0,8,200	0/0:42,0:9:20.90:0,21,217	0/0:30,0:27:60.21:0,60,1010	0/0:29,0:28:51.28:0,51,946	0/0:48,0:46:99:0,112,1782	0/0:43,0:32:81.23:0,81,1255	0/0:41,0:41:72.19:0,72,1156	0/0:38,0:36:96.22:0,96,1417	0/0:16,0:16:36.12:0,36,606	1/1:10,45:52:62.05:1089,62,0	1/1:16,34:47:17.60:541,18,0	1/1:6,29:35:39.01:825,39,0	0/0:77,0:75:99:0,116,2027	0/0:37,0:32:81.21:0,81,1317	0/0:48,0:46:95.83:0,96,1826	0/0:24,0:23:32.33:0,32,679	0/0:21,0:15:39.13:0,39,607	0/0:24,0:24:61.97:0,62,893	0/0:100,0:93:99:0,187,2857	1/1:8,25:30:36.59:463,37,0	0/0:21,0:20:34.67:0,35,547	0/0:55,0:55:89.89:0,90,1447	0/0:28,0:27:66.21:0,66,1063	0/0:55,0:54:99:0,133,2090	0/0:14,0:14:23.48:0,23,391	0/0:11,0:11:18.06:0,18,296
chr10	11481013	.	A	AAC	7488.73	PASS	AB=0.805;AC=29;AF=0.537;AN=54;BaseQRankSum=-5.250;DP=963;FS=0.000;HRun=0;HaplotypeScore=167.2357;InbreedingCoeff=-0.0687;MQ=45.32;MQ0=62;MQRankSum=-1.178;QD=10.39;ReadPosRankSum=-3.076;VQSLOD=3.6398;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:27,13:40:39.91:541,0,40	0/1:8,1:8:50.09:132,0,50	./.	0/1:13,0:4:11.39:11,0,51	1/1:11,2:21:11.06:115,11,0	0/0:26,0:27:32.70:0,33,354	0/0:40,0:36:25.22:0,25,349	0/1:56,0:30:6.81:7,0,19	1/1:30,15:42:2.42:754,2,0	0/1:35,7:35:5.29:446,0,5	0/1:13,9:18:35.15:209,0,35	1/1:34,0:31:10.88:85,11,0	1/1:34,0:34:0.01:46,0,0	1/1:29,0:26:6.54:46,7,0	1/1:44,18:59:4.42:1100,4,0	0/1:34,13:38:7.90:655,0,8	0/1:34,21:53:99:582,0,162	0/1:25,10:34:52.46:534,0,52	0/0:18,0:12:14.05:0,14,64	0/0:9,0:24:34.26:0,34,188	0/0:47,0:81:82.38:0,82,405	0/0:26,0:20:2.51:0,3,7	0/1:21,5:24:99:260,0,103	0/1:36,13:49:24.78:741,0,25	1/1:14,1:23:11.99:102,12,0	1/1:20,11:27:7.46:439,7,0	0/1:16,7:20:39.07:416,0,39	0/1:1,11:13:21.01:268,0,21
chr10	11481694	.	T	TACAC	493.94	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=-1.126;DP=571;FS=17.484;HRun=0;HaplotypeScore=98.0853;InbreedingCoeff=0.5220;MQ=53.14;MQ0=20;MQRankSum=1.185;QD=9.50;ReadPosRankSum=-2.264;VQSLOD=0.4754;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:33:35.89:0,36,499	0/0:9,0:9:5.89:0,6,62	0/0:53,0:23:33.07:0,33,481	0/0:45,0:17:14.41:0,14,188	0/0:8,0:8:23.91:0,24,321	1/1:6,12:17:3.01:49,3,0	1/1:21,0:20:33.58:552,34,0	0/0:34,0:33:48.56:0,49,557	0/0:19,0:19:21.62:0,22,479	0/0:16,0:16:29.91:0,30,410	0/0:10,0:11:9.03:0,9,125	0/1:11,0:13:3.27:3,0,91	0/0:10,0:10:1.18:0,1,161	0/0:20,0:21:2.12:0,2,83	0/0:18,0:18:20.94:0,21,297	0/0:17,0:17:29.70:0,30,367	0/0:36,0:34:36.81:0,37,752	0/0:13,0:11:18.05:0,18,240	0/0:22,0:18:34.01:0,34,402	0/0:12,0:12:26.93:0,27,370	0/0:31,0:35:31.56:0,32,614	0/0:7,0:12:14.41:0,14,186	0/0:10,0:9:21:0,21,327	0/0:28,0:26:44.85:0,45,550	0/0:9,0:6:6.02:0,6,84	0/0:17,0:17:26.36:0,26,349	0/0:22,0:22:29.95:0,30,408	0/0:6,0:5:14.84:0,15,189
chr10	11481706	.	C	CAGAG	199.26	PASS	AB=0.955;AC=8;AF=0.143;AN=56;BaseQRankSum=4.405;DP=556;FS=12.908;HRun=0;HaplotypeScore=96.9689;InbreedingCoeff=0.5334;MQ=49.54;MQ0=20;MQRankSum=-1.721;QD=2.73;ReadPosRankSum=-0.655;VQSLOD=1.0187;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:31:48.16:0,48,877	0/0:7,0:7:9.01:0,9,130	0/0:44,0:16:47.83:0,48,871	0/0:44,0:14:27.96:0,28,465	0/0:9,0:9:24.08:0,24,465	0/1:18,0:17:7.45:7,0,69	0/0:19,0:18:5.31:0,5,43	0/0:33,0:32:90.28:0,90,1260	0/0:19,0:19:54.16:0,54,964	0/0:16,0:15:42.14:0,42,773	0/0:12,0:12:14.89:0,15,275	1/1:7,7:15:4.67:56,5,0	1/1:9,0:8:1.54:59,2,0	1/1:19,0:20:8.94:191,9,0	0/0:17,0:17:24.07:0,24,432	0/0:19,0:19:32.90:0,33,610	0/0:36,0:34:77.77:0,78,1329	0/0:12,0:10:27.09:0,27,477	0/0:26,0:23:60.12:0,60,823	0/0:15,0:13:27.07:0,27,475	0/0:38,0:38:70.96:0,71,1052	0/1:9,0:10:10.81:11,0,14	0/0:10,0:9:21.07:0,21,419	0/0:25,0:23:59.42:0,59,1003	0/0:9,0:6:9.02:0,9,145	0/0:15,0:15:39.13:0,39,714	0/0:20,0:20:42.10:0,42,723	0/0:6,0:5:15.05:0,15,285
chr10	11481712	.	C	CAG	1640.27	PASS	AB=0.875;AC=34;AF=0.607;AN=56;BaseQRankSum=-1.236;DP=573;FS=0.769;HRun=0;HaplotypeScore=84.9814;InbreedingCoeff=-0.1996;MQ=48.77;MQ0=20;MQRankSum=-1.488;QD=3.35;ReadPosRankSum=-0.452;VQSLOD=2.0381;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:21,12:33:3.01:45,3,0	1/1:2,3:5:3.01:46,3,0	1/1:42,0:16:2.04:6,2,0	0/0:44,0:13:1:0,1,36	0/1:8,1:9:36.48:36,0,58	1/1:17,0:16:8.94:73,9,0	1/1:19,0:18:6:52,6,0	0/1:32,0:31:37.17:37,0,69	0/1:22,0:22:38.92:182,0,39	0/1:13,3:15:21.39:82,0,21	0/0:8,4:12:2.83:0,3,23	1/1:20,0:20:22.07:164,22,0	1/1:18,0:15:17.43:117,17,0	1/1:23,0:22:11.88:89,12,0	0/1:11,9:20:36.51:37,0,46	0/1:10,13:23:61:119,0,61	0/1:24,11:33:98.64:155,0,99	0/1:14,0:12:5.58:47,0,6	0/1:24,0:21:20.28:20,0,25	0/0:16,0:14:10.78:0,11,47	0/1:33,0:33:22.08:22,0,97	0/1:10,0:10:5.71:39,0,6	0/0:11,0:10:6.02:0,6,67	0/1:21,3:23:1.06:207,0,1	1/1:10,0:7:3:25,3,0	0/1:10,4:14:8.89:109,0,9	0/1:12,5:18:15.68:40,0,16	1/1:5,3:7:3.01:45,3,0
chr10	11482127	.	TAATAAATA	T	1479.40	PASS	AC=20;AF=0.588;AN=34;BaseQRankSum=1.861;DP=260;FS=0.000;HRun=0;HaplotypeScore=73.5944;InbreedingCoeff=0.5173;MQ=46.53;MQ0=13;MQRankSum=-3.124;QD=12.43;ReadPosRankSum=3.397;VQSLOD=1.5743;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:12:8.98:0,9,73	./.	./.	./.	1/1:6,3:8:3.01:74,3,0	1/1:6,4:10:6.02:149,6,0	./.	0/0:33,0:20:9.03:0,9,199	./.	1/1:6,3:7:6.02:149,6,0	./.	0/0:11,0:13:2.99:0,3,24	0/0:4,0:4:3.01:0,3,123	./.	1/1:6,5:11:5.69:148,6,0	1/1:5,2:7:2.68:74,3,0	0/0:6,6:11:0.89:0,1,2	1/1:12,5:15:6.02:146,6,0	0/0:14,0:12:6.02:0,6,245	./.	./.	0/0:4,0:4:6.02:0,6,245	./.	./.	1/1:9,3:12:3.01:74,3,0	1/1:11,2:13:3.01:74,3,0	1/1:8,5:13:6.02:120,6,0	1/1:5,13:18:24.08:595,24,0
chr10	11483727	.	CT	C	6007.78	PASS	AB=0.704;AC=43;AF=0.768;AN=56;BaseQRankSum=-7.492;DP=428;FS=1.053;HRun=12;HaplotypeScore=74.9513;InbreedingCoeff=0.7342;MQ=70.54;MQ0=1;MQRankSum=-1.282;QD=17.62;ReadPosRankSum=6.150;VQSLOD=5.4051;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,19:23:52.82:400,53,0	1/1:1,8:10:25.94:192,26,0	0/1:17,1:16:20.79:21,0,105	0/0:9,0:7:21:0,21,189	1/1:2,19:21:56.76:438,57,0	1/1:1,21:22:62.71:482,63,0	1/1:0,12:12:32.87:255,33,0	0/0:9,0:22:37.33:0,37,200	1/1:4,9:13:32.54:240,33,0	1/1:2,13:15:38.84:302,39,0	1/1:2,14:16:41.82:325,42,0	1/1:4,8:12:26.85:205,27,0	1/1:3,9:12:29.73:220,30,0	1/1:2,10:12:23.41:185,23,0	1/1:3,13:16:29.86:232,30,0	1/1:2,13:15:35.82:278,36,0	1/1:2,17:19:50.80:395,51,0	1/1:1,9:10:26.89:209,27,0	0/0:10,0:26:63.19:0,63,350	0/0:11,0:21:51.79:0,52,308	0/0:8,0:9:26.01:0,26,154	1/1:2,9:12:31.91:236,32,0	1/1:4,3:7:11.92:90,12,0	0/1:3,9:12:0.41:179,0,0	1/1:3,12:15:38.52:288,39,0	1/1:5,19:24:55.53:416,56,0	0/1:5,11:16:19.06:234,0,19	1/1:0,9:9:23.91:186,24,0
chr10	11483801	.	A	AT	13091.93	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-4.780;DP=523;FS=3.028;HRun=9;HaplotypeScore=60.4878;InbreedingCoeff=0.9444;MQ=75.21;MQ0=0;MQRankSum=-5.029;QD=26.66;ReadPosRankSum=3.675;VQSLOD=5.1990;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,36:42:76.55:1043,77,0	1/1:4,4:8:18.03:184,18,0	0/0:19,0:19:38.32:0,38,306	0/0:11,0:12:11.51:0,12,122	1/1:3,16:19:57.15:629,57,0	1/1:2,11:13:36.10:398,36,0	1/1:0,22:22:57.15:630,57,0	1/1:8,28:37:86.98:904,87,0	1/1:1,10:11:30.08:332,30,0	1/1:2,24:25:72.19:789,72,0	1/1:5,11:16:42.08:445,42,0	1/1:3,5:8:15.04:166,15,0	1/1:3,14:18:35.93:378,36,0	1/1:2,6:8:21.06:231,21,0	1/1:6,4:10:15.04:164,15,0	1/1:2,18:20:54.14:588,54,0	1/1:4,19:23:57.11:610,57,0	1/1:2,13:15:33.09:365,33,0	1/1:4,17:21:28.08:517,28,0	1/1:5,19:24:57.15:630,57,0	1/1:2,16:18:45.07:484,45,0	1/1:3,13:16:42.05:450,42,0	1/1:0,14:14:42.11:464,42,0	1/1:4,22:26:49.12:754,49,0	1/1:4,10:14:12.27:341,12,0	1/1:2,25:27:72.12:757,72,0	1/1:2,17:19:41.83:464,42,0	1/1:6,9:16:38.77:375,39,0
chr10	11484349	.	C	CCTTTTGT	6647.60	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-5.015;DP=556;FS=1.560;HRun=0;HaplotypeScore=139.8596;InbreedingCoeff=0.9950;MQ=85.98;MQ0=0;MQRankSum=-7.758;QD=71.48;ReadPosRankSum=-4.020;VQSLOD=4.4670;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:78.27:0,78,1834	0/0:13,0:13:33.06:0,33,768	0/0:32,0:32:73.04:0,73,1398	0/0:23,0:23:47.79:0,48,905	0/0:18,0:18:51.18:0,51,1265	0/0:20,0:20:51.11:0,51,1190	0/0:19,0:18:45.12:0,45,1031	1/1:9,17:29:72.20:1913,72,0	0/0:11,0:11:30.09:0,30,693	0/0:32,0:32:87.08:0,87,1990	0/0:17,0:17:42.14:0,42,1047	0/0:17,0:17:45.12:0,45,1044	0/0:20,0:20:51.18:0,51,1246	0/0:14,0:14:36.12:0,36,899	0/0:15,0:15:36.12:0,36,894	0/0:17,0:17:39.13:0,39,872	0/0:24,0:24:60.18:0,60,1392	0/0:23,0:23:66.20:0,66,1558	1/1:6,15:21:57.15:1646,57,0	1/1:4,27:32:75.26:2694,75,0	1/1:5,4:10:15.05:395,15,0	0/0:14,0:14:32.29:0,32,732	0/0:14,0:14:36.12:0,36,867	0/0:15,0:15:42.09:0,42,933	0/0:21,0:21:48.16:0,48,1198	0/0:22,0:22:54.17:0,54,1294	0/0:20,0:20:57.20:0,57,1391	0/0:11,0:11:33.09:0,33,763
chr10	11484400	.	C	CTGTGTGTG	4071.55	PASS	AC=50;AF=0.962;AN=52;BaseQRankSum=1.170;DP=548;FS=3.318;HRun=0;HaplotypeScore=176.3839;InbreedingCoeff=0.1856;MQ=68.27;MQ0=4;MQRankSum=-0.187;QD=8.63;ReadPosRankSum=0.094;VQSLOD=2.6494;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:24:9.03:239,9,0	1/1:15,0:15:3.01:116,3,0	0/0:36,0:20:3.01:0,3,68	./.	1/1:21,0:20:6.92:197,7,0	1/1:23,0:22:2.99:23,3,0	1/1:15,0:14:9.03:207,9,0	1/1:21,0:20:20.27:337,20,0	./.	1/1:33,0:29:39.11:541,39,0	1/1:17,0:16:3.01:68,3,0	1/1:21,0:23:3.48:83,3,0	1/1:15,0:15:9.01:130,9,0	1/1:9,0:9:8.97:70,9,0	1/1:14,0:14:6.02:193,6,0	1/1:20,0:20:6.02:156,6,0	1/1:21,0:20:12.03:221,12,0	1/1:23,0:23:11.47:129,11,0	1/1:16,0:14:6.01:77,6,0	1/1:20,0:20:9.03:204,9,0	1/1:14,0:14:6.92:121,7,0	1/1:22,0:22:3.01:122,3,0	1/1:16,0:16:0.47:1,0,0	1/1:19,0:18:3.01:65,3,0	1/1:13,10:27:5.93:244,6,0	1/1:14,0:14:18.06:282,18,0	1/1:20,0:18:6:134,6,0	1/1:8,0:6:9.03:114,9,0
chr10	11485186	.	TC	T	16517.73	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=13.975;DP=733;FS=1.925;HRun=1;HaplotypeScore=78.1614;InbreedingCoeff=0.9700;MQ=73.18;MQ0=0;MQRankSum=-0.896;QD=37.88;ReadPosRankSum=4.583;VQSLOD=5.4376;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,54:54:99:2055,147,0	1/1:0,10:10:27.09:378,27,0	0/0:11,0:11:20.25:0,20,242	0/0:10,0:10:1.71:0,2,154	1/1:0,33:33:90.17:1191,90,0	0/0:30,0:30:90.29:0,90,1384	0/0:28,0:28:81.24:0,81,1216	0/0:30,0:30:90.28:0,90,1362	1/1:0,26:26:63.21:881,63,0	1/1:0,33:33:99:1362,99,0	1/1:0,26:26:75.25:1048,75,0	0/0:29,0:29:87.28:0,87,1336	0/0:31,0:31:93.25:0,93,1402	0/0:24,0:24:72.23:0,72,1098	1/1:0,36:36:87.29:1217,87,0	1/1:0,34:34:87.29:1217,87,0	1/1:0,37:37:96.32:1342,96,0	1/1:0,26:26:75.25:1049,75,0	0/0:17,0:17:51.09:0,51,747	0/0:23,0:23:65.82:0,66,986	0/0:25,0:25:75.24:0,75,1148	0/0:16,0:16:48.15:0,48,729	1/1:0,18:18:45.14:628,45,0	1/1:0,25:25:72.24:1007,72,0	0/0:23,0:23:69.22:0,69,1052	1/1:0,25:25:75.25:1049,75,0	1/1:0,43:43:99:1718,123,0	1/1:0,10:10:27.09:377,27,0
chr10	11485461	.	C	CA	1397.84	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-0.533;DP=638;FS=2.552;HRun=8;HaplotypeScore=65.7391;InbreedingCoeff=0.9876;MQ=65.48;MQ0=5;MQRankSum=0.268;QD=20.56;ReadPosRankSum=-0.576;VQSLOD=3.5050;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,111,1000	0/0:8,0:8:18.01:0,18,165	0/0:24,0:20:20.65:0,21,290	0/0:29,0:21:14.46:0,14,155	0/0:32,0:33:92.07:0,92,826	0/0:14,0:14:35.99:0,36,320	0/0:21,0:21:56.98:0,57,508	0/0:24,0:24:69.04:0,69,631	0/0:19,0:19:42.01:0,42,380	0/0:34,0:34:81.02:0,81,737	0/0:21,0:21:63.03:0,63,573	1/1:5,13:18:36.11:415,36,0	1/1:4,10:14:18.04:200,18,0	1/1:2,15:17:39.12:450,39,0	0/0:20,0:20:54.02:0,54,491	0/0:17,0:17:44.98:0,45,402	0/0:22,0:22:60.01:0,60,543	0/0:18,0:18:50.98:0,51,458	0/0:22,0:21:30.86:0,31,457	0/0:22,0:22:60.01:0,60,544	0/0:19,0:18:48.02:0,48,439	1/1:2,17:19:20.69:492,21,0	0/0:29,0:29:81.44:0,81,731	0/0:21,1:22:28.40:0,28,506	0/0:31,0:30:75.02:0,75,686	0/0:22,0:22:60.03:0,60,548	0/0:36,0:36:90.04:0,90,823	0/0:23,0:23:63.02:0,63,576
chr10	11487148	.	C	CTT	11067.87	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-6.060;DP=621;FS=15.975;HRun=10;HaplotypeScore=92.7530;InbreedingCoeff=0.9806;MQ=70.45;MQ0=1;MQRankSum=-0.493;QD=29.99;ReadPosRankSum=-0.297;VQSLOD=3.5789;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,25:29:60.17:834,60,0	1/1:0,9:11:29.07:375,29,0	0/0:25,0:19:35.99:0,36,362	0/0:31,0:25:37.31:0,37,343	1/1:1,23:29:76.64:981,77,0	1/1:1,0:13:17.47:61,17,0	1/1:1,0:13:29.94:105,30,0	0/0:31,0:31:66.07:0,66,660	1/1:4,15:19:39.09:556,39,0	1/1:6,30:37:89.78:1283,90,0	1/1:2,23:30:75.10:971,75,0	0/0:19,0:19:45.06:0,45,458	0/0:21,0:21:51.09:0,51,519	0/0:18,0:18:45.07:0,45,457	1/1:2,15:17:36.11:519,36,0	1/1:1,17:18:42.14:620,42,0	1/1:2,9:12:29.96:401,30,0	1/1:2,19:21:48.16:716,48,0	0/0:20,0:20:45.07:0,45,457	0/0:23,0:23:54.08:0,54,549	0/0:4,0:4:6:0,6,61	0/0:23,0:23:51.07:0,51,518	1/1:3,19:27:62.67:843,63,0	1/1:1,6:8:14.34:181,14,0	0/0:35,0:35:90.13:0,90,904	1/1:3,21:27:65.18:893,65,0	1/1:1,25:29:61.67:832,62,0	1/1:0,24:27:65.19:896,65,0
chr10	11487175	.	TTCTTTCTTTTTATAAGATAGTGTCTCATGCAGCCCAGGGCTA	T	1300.53	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=3.152;DP=590;FS=5.392;HRun=0;HaplotypeScore=568.9069;InbreedingCoeff=0.8447;MQ=70.46;MQ0=1;MQRankSum=-0.392;QD=32.51;ReadPosRankSum=0.044;VQSLOD=-0.4223;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:24:66.23:0,66,8608	0/0:13,0:13:39.07:0,39,4260	0/0:30,0:21:57.18:0,57,3130	0/0:35,0:27:59.84:0,60,2961	0/0:31,0:31:84.25:0,84,9128	0/0:14,0:14:30.10:0,30,4770	0/0:12,0:12:36.12:0,36,3756	1/1:16,0:15:2.58:54,3,0	0/0:21,0:21:60.21:0,60,9667	0/0:30,0:30:84.29:0,84,10467	0/0:25,0:25:66.17:0,66,6714	0/0:24,0:24:72.25:0,72,9815	0/0:18,0:18:48.16:0,48,5898	0/0:23,0:23:69.23:0,69,9285	0/0:25,0:25:66.23:0,66,9020	0/0:19,0:19:54.19:0,54,7391	0/0:16,0:16:42.14:0,42,5649	0/0:17,0:17:42.14:0,42,6054	1/1:4,3:7:6.02:363,6,0	1/1:12,4:16:12.01:988,12,0	1/1:1,0:1:2.99:24,3,0	0/0:27,0:27:75.26:0,75,9433	0/0:29,0:29:81.75:0,82,9452	0/0:9,0:9:21.07:0,21,2172	0/0:32,0:32:93.32:0,93,11454	0/0:25,0:25:69.24:0,69,10319	0/0:25,0:24:57.20:0,57,6509	0/0:25,0:25:66.23:0,66,11199
chr10	11487336	.	ATG	A	218.93	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.541;DP=1088;FS=17.832;HRun=0;HaplotypeScore=274.7929;InbreedingCoeff=0.9677;MQ=43.35;MQ0=15;MQRankSum=1.869;QD=8.42;ReadPosRankSum=-0.715;VQSLOD=1.8849;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:41.71:0,42,659	0/0:10,0:10:18.06:0,18,303	0/0:60,0:14:33.56:0,34,499	0/0:60,0:28:54.65:0,55,837	0/0:27,0:27:38.69:0,39,656	0/0:23,0:23:23.51:0,24,407	0/0:35,0:33:42.79:0,43,870	0/0:72,0:64:99:0,152,2388	0/0:45,0:45:51.11:0,51,858	0/0:37,0:37:99:0,99,1582	0/0:24,0:24:23.48:0,23,367	0/0:54,0:54:77.02:0,77,1190	0/0:53,0:52:99:0,108,1491	0/0:40,0:40:26.36:0,26,431	0/0:44,0:44:49.88:0,50,837	0/0:45,0:45:84.10:0,84,1361	0/0:34,0:33:37.36:0,37,615	0/0:28,0:28:68.03:0,68,1068	0/0:23,0:17:48.16:0,48,808	0/0:31,0:31:36.01:0,36,557	0/0:68,0:65:98.84:0,99,1460	0/0:33,0:33:35.75:0,36,604	0/0:28,0:28:18.04:0,18,265	0/0:48,0:48:17.73:0,18,270	1/1:5,21:26:24.08:312,24,0	0/0:47,0:47:99:0,115,1856	0/0:31,0:31:77.45:0,77,1226	0/0:20,0:20:48.16:0,48,797
chr10	11487355	.	T	TGTGTGA	2794.41	PASS	AB=0.895;AC=10;AF=0.179;AN=56;BaseQRankSum=4.037;DP=1098;FS=56.935;HRun=0;HaplotypeScore=331.7396;InbreedingCoeff=0.4033;MQ=38.20;MQ0=34;MQRankSum=-2.498;QD=10.67;ReadPosRankSum=-3.066;VQSLOD=0.8498;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:36:14.78:0,15,232	0/0:11,0:11:12.02:0,12,209	0/0:56,0:12:24.04:0,24,367	0/0:56,0:22:45.13:0,45,852	0/0:24,0:23:25.69:0,26,510	0/0:27,0:26:19.10:0,19,436	0/0:36,0:34:35.89:0,36,718	0/0:89,0:72:99:0,123,2160	0/0:56,0:56:6.58:0,7,597	0/0:40,0:36:49.63:0,50,1305	0/0:25,0:25:11.73:0,12,264	0/1:43,11:54:30.32:800,0,30	1/1:33,18:50:11.10:1558,11,0	0/1:24,12:36:27.42:313,0,27	0/0:51,0:51:31.38:0,31,861	0/0:46,0:46:66.91:0,67,1212	0/1:31,0:30:3.75:4,0,343	0/0:27,0:27:55.54:0,56,1023	0/0:33,0:18:41.93:0,42,658	0/1:28,0:28:14.56:15,0,356	0/0:55,0:50:40.75:0,41,780	1/1:22,11:33:15.03:243,15,0	1/1:29,0:29:0.46:1,0,0	0/0:51,0:51:12.01:0,12,264	0/0:21,0:21:20.76:0,21,461	0/0:48,0:44:39.26:0,39,1758	0/0:31,0:30:19.66:0,20,750	0/0:16,0:16:29.49:0,29,773
chr10	11487380	.	A	ATGTGTGAGTG	9750.68	PASS	AB=0.849;AC=41;AF=0.759;AN=54;BaseQRankSum=-4.194;DP=1014;FS=8.102;HRun=0;HaplotypeScore=316.5048;InbreedingCoeff=0.1669;MQ=35.76;MQ0=41;MQRankSum=1.131;QD=11.32;ReadPosRankSum=0.185;VQSLOD=1.9182;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:16,14:30:1.86:0,2,6	0/1:12,2:14:6.61:84,0,7	0/0:33,0:4:2.80:0,3,13	0/0:43,0:13:12.04:0,12,165	1/1:17,3:19:1.77:37,2,0	1/1:20,4:23:2.67:38,3,0	1/1:40,1:38:23.34:399,23,0	1/1:63,0:42:52.93:735,53,0	1/1:28,26:55:3.89:14,4,0	1/1:38,3:36:65.55:1072,66,0	1/1:26,2:28:5.32:48,5,0	1/1:51,0:51:34.10:736,34,0	1/1:48,3:49:76.50:1799,77,0	1/1:37,0:37:11.71:298,12,0	0/1:48,8:55:8.33:238,0,8	1/1:46,7:51:38.38:933,38,0	0/1:10,17:26:49.85:59,0,50	0/1:26,1:27:55.57:426,0,56	0/1:27,0:12:32.37:195,0,32	1/1:27,0:27:6.17:106,6,0	1/1:47,0:41:14.71:186,15,0	1/1:35,0:35:1.29:23,1,0	0/1:11,19:30:0:0,0,0	./.	0/1:24,0:24:6.93:7,0,190	1/1:39,0:34:56.94:888,57,0	1/1:24,4:27:39.02:955,39,0	1/1:13,2:15:25.63:473,26,0
chr10	11487387	.	AGT	A	2138.73	PASS	AB=0.941;AC=25;AF=0.463;AN=54;BaseQRankSum=-6.577;DP=1000;FS=0.991;HRun=0;HaplotypeScore=279.9975;InbreedingCoeff=-0.1406;MQ=34.85;MQ0=41;MQRankSum=0.250;QD=3.19;ReadPosRankSum=1.947;VQSLOD=1.6477;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:30:0:0,0,0	0/1:13,1:14:13.34:13,0,22	0/0:38,0:3:5.81:0,6,56	0/0:44,0:10:12.04:0,12,187	1/1:19,1:19:2.98:39,3,0	0/1:26,0:25:30.10:30,0,90	0/0:33,2:33:23.85:0,24,402	0/1:61,8:50:99:520,0,370	0/0:55,0:56:3.55:0,4,72	0/1:42,1:40:99:125,0,709	1/1:27,0:27:5.99:50,6,0	0/0:52,4:56:67.10:0,67,1041	0/1:45,5:48:99:148,0,812	0/1:28,6:34:17.22:17,0,207	1/1:54,5:58:10.69:158,11,0	0/1:54,2:54:38.81:269,0,39	0/1:26,0:25:22.18:22,0,50	0/1:19,3:22:93.57:170,0,94	0/1:18,2:10:33.28:33,0,40	1/1:19,6:25:6.01:67,6,0	1/1:32,10:35:11.68:158,12,0	0/0:33,2:35:5.20:0,5,93	0/1:26,1:27:0:0,0,0	./.	0/0:23,0:23:17.78:0,18,297	0/1:36,3:34:99:250,0,550	0/1:23,3:25:99:157,0,199	0/1:15,0:15:67.66:68,0,173
chr10	11487389	.	T	TGTGTGTGA	5474.09	PASS	AB=0.996;AC=27;AF=0.482;AN=56;BaseQRankSum=-8.164;DP=1003;FS=0.969;HRun=0;HaplotypeScore=318.1193;InbreedingCoeff=-0.1868;MQ=34.78;MQ0=40;MQRankSum=0.600;QD=7.09;ReadPosRankSum=5.291;VQSLOD=2.3797;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:31,0:31:0:1,0,0	0/1:14,0:14:14.37:14,0,25	0/0:39,0:3:5.81:0,6,56	0/0:41,0:6:12.04:0,12,248	1/1:21,0:19:2.55:39,3,0	0/1:24,0:23:34:34,0,83	0/0:35,0:32:3.82:0,4,10	0/1:67,0:49:99:1128,0,368	0/0:57,0:57:2.41:0,2,42	0/1:41,0:38:99:395,0,238	1/1:27,0:27:5.34:50,5,0	0/1:57,0:57:99:169,0,489	0/1:51,0:51:99:735,0,127	0/1:32,0:32:54.36:129,0,54	1/1:61,0:60:11.77:209,12,0	0/1:59,0:57:0.59:512,0,1	0/1:26,0:25:19.82:20,0,66	0/1:22,0:22:99:255,0,159	0/1:16,1:7:36.04:366,0,36	1/1:20,7:27:6.02:126,6,0	1/1:41,0:34:12.20:222,12,0	0/0:35,0:35:4.02:0,4,71	0/1:31,0:31:0:0,0,0	0/1:39,0:39:0:0,0,0	0/0:24,0:24:17.39:0,17,364	0/1:42,0:37:99:397,0,206	0/1:26,0:25:53.76:465,0,54	0/1:15,0:15:33.63:210,0,34
chr10	11487395	.	T	TGA	1989.67	PASS	AB=0.989;AC=25;AF=0.446;AN=56;BaseQRankSum=-1.945;DP=971;FS=0.000;HRun=0;HaplotypeScore=278.8947;InbreedingCoeff=-0.0496;MQ=33.89;MQ0=34;MQRankSum=-0.353;QD=2.95;ReadPosRankSum=-4.786;VQSLOD=1.5483;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:2.39:0,2,13	0/1:13,0:13:2.97:25,0,3	0/0:45,0:6:14.82:0,15,156	0/0:42,0:7:19.56:0,20,228	1/1:17,2:18:2.89:40,3,0	0/1:22,1:22:7.80:8,0,83	0/0:32,2:31:23.96:0,24,366	0/1:61,0:44:75.68:76,0,724	0/1:57,0:57:47.48:77,0,47	0/1:34,0:34:99:179,0,223	1/1:31,1:31:5.98:51,6,0	0/0:55,0:55:78.61:0,79,999	0/1:46,5:50:99:178,0,693	0/0:33,1:34:7.61:0,8,223	1/1:55,1:55:10.08:109,10,0	1/1:51,7:56:16.07:345,16,0	0/1:22,0:21:6.70:23,0,7	0/1:23,0:23:44.57:173,0,45	0/1:16,0:7:25.81:26,0,67	1/1:28,0:28:6.01:63,6,0	0/1:44,0:37:14.64:109,0,15	0/0:35,1:36:6.89:0,7,114	0/1:29,0:29:0:0,0,0	0/1:33,0:34:0:0,0,0	0/0:27,0:27:26.26:0,26,346	0/1:36,0:34:99:347,0,124	0/1:24,1:24:58.38:240,0,58	0/1:12,0:12:45.24:82,0,45
chr10	11487402	.	G	GTGTA	5229.73	PASS	AB=0.815;AC=26;AF=0.481;AN=54;BaseQRankSum=-0.326;DP=974;FS=6.940;HRun=0;HaplotypeScore=291.3664;InbreedingCoeff=0.5472;MQ=33.99;MQ0=26;MQRankSum=-4.824;QD=10.78;ReadPosRankSum=-0.692;VQSLOD=2.8771;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:16,7:23:2.98:23,3,0	0/1:6,8:14:7.14:70,0,7	0/0:46,0:7:21.07:0,21,298	0/0:40,0:8:14.99:0,15,182	0/1:15,4:18:0.02:1,0,0	0/0:24,0:23:14.66:0,15,241	0/0:34,0:31:23.72:0,24,407	0/0:61,0:47:94.06:0,94,1340	1/1:32,21:53:3.21:198,3,0	1/1:26,16:41:2.85:1527,3,0	0/1:13,17:29:0.01:1,0,0	0/0:57,0:57:86.27:0,86,1400	0/0:53,0:52:66.96:0,67,1096	0/0:37,0:37:26.62:0,27,404	1/1:26,29:54:0.48:93,0,0	1/1:33,24:55:22.30:313,22,0	1/1:20,3:23:0.02:268,0,0	0/1:14,5:19:38.37:285,0,38	0/1:14,0:9:2.29:2,0,186	0/1:32,0:32:0.20:1,0,0	0/0:43,0:37:5.65:0,6,93	0/0:38,0:38:14.73:0,15,244	1/1:24,7:31:5.99:74,6,0	./.	0/0:26,0:26:27.05:0,27,377	1/1:21,16:36:69.19:1473,69,0	1/1:11,12:22:23.73:453,24,0	1/1:8,5:13:24.08:449,24,0
chr10	11487404	.	GTA	G	33.94	PASS	AB=0.985;AC=8;AF=0.143;AN=56;BaseQRankSum=-1.451;DP=977;FS=9.155;HRun=0;HaplotypeScore=293.0755;InbreedingCoeff=0.1975;MQ=34.13;MQ0=27;MQRankSum=-2.307;QD=0.16;ReadPosRankSum=-4.754;VQSLOD=0.3232;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:21,1:22:5.77:0,6,59	0/0:14,0:14:11.39:0,11,70	0/0:47,0:7:14.23:0,14,306	0/0:41,0:8:19.77:0,20,306	0/1:19,0:18:0:0,0,2	0/0:27,0:26:14.88:0,15,290	0/0:37,1:35:24.05:0,24,464	0/0:61,0:48:99:0,100,1697	0/0:52,1:54:2.29:0,2,92	0/0:41,1:41:35.10:0,35,954	0/1:31,0:30:0:0,0,1	0/0:57,0:57:96.29:0,96,1703	0/0:53,0:52:47.42:0,47,1372	0/0:37,0:37:29.10:0,29,483	0/0:56,0:55:11.19:0,11,176	0/1:58,0:56:75.42:75,0,125	0/0:21,0:21:11.89:0,12,98	0/1:18,1:20:2.41:2,0,181	0/0:15,0:9:12.68:0,13,239	1/1:31,0:31:5.46:37,5,0	0/0:41,2:37:1:0,1,93	0/0:37,1:38:17.65:0,18,315	0/0:30,0:30:6.01:0,6,74	0/0:24,0:25:0:0,0,0	0/0:26,0:26:27.09:0,27,503	0/1:35,0:34:15.73:16,0,647	0/1:23,0:22:12.74:13,0,177	0/0:13,0:13:25.05:0,25,271
chr10	11487445	.	TGTGTGA	T	2860.86	PASS	AB=0.953;AC=24;AF=0.429;AN=56;BaseQRankSum=-5.299;DP=1012;FS=1.527;HRun=0;HaplotypeScore=261.3314;InbreedingCoeff=-0.2699;MQ=39.32;MQ0=25;MQRankSum=-1.561;QD=3.69;ReadPosRankSum=-9.919;VQSLOD=0.0315;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:6.02:0,6,111	0/0:16,0:15:10.61:0,11,126	0/1:52,0:12:15.63:16,0,586	0/0:68,0:23:14.97:0,15,938	0/0:28,0:27:0:0,0,0	0/0:22,0:22:15.05:0,15,364	0/1:35,0:34:29.53:30,0,348	1/1:14,43:47:30.29:977,30,0	0/1:47,0:47:72.62:73,0,414	0/1:41,0:41:62.79:63,0,1667	0/1:41,0:40:43.02:43,0,67	0/1:53,0:53:77.36:77,0,1728	0/1:46,0:45:58.21:58,0,1511	0/1:39,0:39:71.24:71,0,756	0/0:40,0:38:18.53:0,19,411	0/1:45,0:43:62.21:62,0,254	0/1:12,0:12:22.04:22,0,370	0/1:18,0:18:55.10:55,0,305	1/1:9,16:19:14.88:846,15,0	0/1:7,33:38:0.13:0,0,0	0/1:26,52:71:0.05:0,0,0	0/0:45,0:45:27.09:0,27,652	0/1:36,0:36:99:173,0,170	1/1:10,0:9:6.02:96,6,0	0/1:31,0:31:20.92:21,0,645	0/1:33,0:31:99:142,0,1283	0/1:20,0:20:99:163,0,132	0/1:16,0:16:32.82:33,0,292
chr10	11487447	.	TGTGA	T	957.45	PASS	AB=0.986;AC=18;AF=0.321;AN=56;BaseQRankSum=-2.201;DP=1001;FS=2.799;HRun=0;HaplotypeScore=255.5498;InbreedingCoeff=0.1521;MQ=39.61;MQ0=22;MQRankSum=0.773;QD=1.80;ReadPosRankSum=-9.898;VQSLOD=-0.0636;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:20,0:20:36.05:36,0,80	0/0:15,0:14:12.59:0,13,120	0/0:53,0:14:20.88:0,21,510	0/0:66,0:23:10.89:0,11,775	0/1:28,0:28:0.10:0,0,0	0/0:21,0:21:15.05:0,15,250	0/0:33,0:32:7:0,7,284	1/1:54,0:44:57.36:448,57,0	0/1:47,0:48:16.94:17,0,351	0/0:39,0:39:47.47:0,47,1276	0/1:40,0:40:4.33:4,0,45	0/0:50,3:53:23.82:0,24,1249	0/0:46,2:47:37.92:0,38,1224	0/1:36,2:38:19.29:19,0,530	0/0:39,0:37:18.52:0,19,276	0/1:45,0:43:43.29:43,0,236	0/0:11,0:11:21.89:0,22,360	0/1:17,2:19:72.31:72,0,217	1/1:24,0:19:28.93:395,29,0	0/1:39,0:37:0:0,0,0	0/1:75,0:68:0:0,0,0	0/0:43,1:44:5.14:0,5,425	0/1:36,0:36:19.24:19,0,120	1/1:8,0:7:4.99:18,5,0	0/0:30,0:30:18.13:0,18,465	0/1:35,0:32:4.47:4,0,964	0/1:22,0:22:37.61:38,0,119	0/0:16,0:16:26.91:0,27,335
chr10	11487451	.	A	AGTGT	17884.30	PASS	AB=0.867;AC=46;AF=0.821;AN=56;BaseQRankSum=-3.122;DP=989;FS=8.030;HRun=0;HaplotypeScore=201.3261;InbreedingCoeff=0.4164;MQ=40.11;MQ0=22;MQRankSum=3.566;QD=20.60;ReadPosRankSum=2.883;VQSLOD=3.8868;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:8,13:21:20.11:162,0,20	1/1:8,9:16:14.07:174,14,0	0/0:53,0:15:28.68:0,29,433	0/0:65,0:24:2.78:0,3,577	0/1:8,20:27:0:0,0,0	1/1:0,22:22:15.04:400,15,0	1/1:4,30:34:17.92:474,18,0	0/1:49,0:41:15.41:414,0,15	1/1:14,32:47:30.21:635,30,0	1/1:17,25:42:99:2337,108,0	1/1:15,23:37:6.02:129,6,0	1/1:20,31:51:93.80:2248,94,0	1/1:19,31:49:89.22:2093,89,0	1/1:9,26:35:37.84:881,38,0	1/1:11,23:34:18.04:425,18,0	1/1:20,25:43:26.22:518,26,0	1/1:3,9:12:25.30:579,25,0	1/1:16,4:20:24.99:449,25,0	0/1:24,0:20:61.79:327,0,62	0/1:35,0:33:0.02:0,0,0	0/1:70,0:64:0:0,0,0	1/1:7,37:44:33.09:770,33,0	1/1:14,22:36:21.07:399,21,0	1/1:7,3:9:6.02:96,6,0	1/1:3,25:28:33.11:871,33,0	1/1:10,24:32:93.27:2201,93,0	1/1:12,8:21:29.51:535,30,0	1/1:5,11:16:30.10:766,30,0
chr10	11487490	.	AGT	A	2461.37	PASS	AB=0.905;AC=31;AF=0.554;AN=56;BaseQRankSum=10.006;DP=1080;FS=49.176;HRun=0;HaplotypeScore=283.9199;InbreedingCoeff=0.6927;MQ=41.42;MQ0=35;MQRankSum=2.878;QD=4.83;ReadPosRankSum=3.780;VQSLOD=1.1885;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:26:8.39:70,8,0	1/1:15,2:16:20.92:113,21,0	0/0:48,0:15:28.62:0,29,364	0/0:49,0:13:13.28:0,13,176	1/1:30,5:35:24.26:127,24,0	1/1:20,2:21:5.78:32,6,0	1/1:24,4:28:21.71:154,22,0	0/0:78,0:56:99:0,138,2084	1/1:30,7:37:7.85:128,8,0	0/1:40,3:42:71.44:460,0,71	1/1:24,10:34:7.66:62,8,0	0/0:51,0:50:55.97:0,56,843	0/0:65,0:63:99:0,108,1560	0/0:32,0:32:27.09:0,27,439	1/1:40,2:42:23.11:141,23,0	1/1:35,4:38:0.44:94,0,0	1/1:22,1:23:20.39:143,20,0	0/1:25,2:27:99:134,0,120	0/0:26,0:17:45.15:0,45,723	0/0:33,0:33:30.08:0,30,519	0/0:120,0:115:99:0,118,1966	0/0:42,0:42:63.20:0,63,1038	1/1:29,3:32:48.94:271,49,0	1/1:29,1:29:36.70:190,37,0	0/0:25,0:23:33.11:0,33,548	0/1:28,6:32:99:356,0,184	1/1:23,0:23:24.02:140,24,0	1/1:10,4:13:9.51:58,10,0
chr10	11487509	.	G	GTA	11567.45	PASS	AB=0.994;AC=42;AF=0.750;AN=56;BaseQRankSum=-2.098;DP=1142;FS=27.043;HRun=0;HaplotypeScore=281.8843;InbreedingCoeff=0.2276;MQ=39.96;MQ0=40;MQRankSum=3.772;QD=10.84;ReadPosRankSum=3.688;VQSLOD=3.2521;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:35,0:32:21.29:243,21,0	1/1:16,2:17:35.82:423,36,0	0/0:15,0:4:8.98:0,9,91	0/0:27,0:2:5.99:0,6,51	1/1:37,1:38:41.92:465,42,0	1/1:19,1:17:5.70:67,6,0	1/1:29,0:27:32.99:349,33,0	0/1:79,0:51:31.34:31,0,412	0/1:41,1:42:13.06:161,0,13	0/1:52,0:50:69.37:1128,0,69	1/1:33,5:38:29.71:297,30,0	1/1:5,45:51:29.92:571,30,0	1/1:12,52:64:39.44:1467,39,0	1/1:12,20:32:31.80:507,32,0	1/1:47,0:47:10.76:269,11,0	1/1:51,2:51:16.76:337,17,0	1/1:25,0:25:26.65:578,27,0	0/1:30,0:30:99:211,0,179	0/0:33,0:14:40.77:0,41,298	0/1:40,0:40:7.38:7,0,147	0/1:140,0:133:76.39:76,0,513	1/1:15,31:46:47.81:1164,48,0	1/1:31,1:32:60.14:682,60,0	1/1:43,1:44:51.07:551,51,0	1/1:12,15:25:45.53:697,46,0	0/1:35,1:33:97.28:683,0,97	1/1:29,2:31:37.30:412,37,0	0/1:14,0:13:0.75:192,0,1
chr10	11487542	.	AGT	A	9611.15	PASS	AB=0.604;AC=26;AF=0.481;AN=54;BaseQRankSum=3.640;DP=1199;FS=7.970;HRun=0;HaplotypeScore=277.8735;InbreedingCoeff=0.3609;MQ=42.00;MQ0=44;MQRankSum=2.302;QD=15.86;ReadPosRankSum=1.506;VQSLOD=3.1400;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:19,25:41:5.66:269,0,6	1/1:3,17:20:39.13:512,39,0	0/0:47,0:3:6.02:0,6,77	./.	1/1:6,29:35:57.19:749,57,0	1/1:6,14:16:4.41:76,4,0	0/1:13,9:19:28.76:143,0,29	0/0:76,0:38:74.79:0,75,1143	0/1:13,30:43:60.46:171,0,60	0/1:14,42:54:99:1279,0,114	1/1:4,29:33:51.17:668,51,0	0/0:64,0:64:59.73:0,60,977	0/0:58,0:57:68.77:0,69,1057	0/0:24,0:24:20.99:0,21,299	0/1:19,31:50:13.56:310,0,14	0/1:10,43:52:13.97:325,0,14	1/1:7,25:32:40:973,40,0	0/1:12,24:36:37.32:677,0,37	0/0:26,0:10:24.08:0,24,399	0/0:37,0:37:66.21:0,66,1054	0/0:138,0:130:99:0,216,3640	0/0:46,1:47:71.65:0,72,1704	1/1:8,24:32:78.21:992,78,0	1/1:16,39:54:66.07:851,66,0	0/0:26,0:24:62.63:0,63,999	1/1:14,21:33:26.80:858,27,0	1/1:4,26:30:1.22:508,1,0	0/1:2,8:10:24.10:251,0,24
chr10	11487590	.	AGT	A	31.79	PASS	AC=4;AF=0.077;AN=52;BaseQRankSum=5.235;DP=961;FS=15.095;HRun=0;HaplotypeScore=301.5165;InbreedingCoeff=0.8899;MQ=43.54;MQ0=41;MQRankSum=-4.003;QD=0.93;ReadPosRankSum=-5.353;VQSLOD=0.4946;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:36:26.16:0,26,446	0/0:11,0:11:20.80:0,21,321	./.	./.	0/0:33,0:32:52.82:0,53,864	1/1:4,11:13:4.84:43,5,0	1/1:8,10:16:9.09:90,9,0	0/0:69,0:40:84.33:0,84,1349	0/0:39,0:37:27.70:0,28,450	0/0:48,0:43:75.07:0,75,1129	0/0:28,0:28:63.86:0,64,1028	0/0:50,0:49:65.65:0,66,1118	0/0:36,0:36:69.08:0,69,1105	0/0:30,0:29:39:0,39,557	0/0:47,0:47:55.16:0,55,938	0/0:38,0:37:22.88:0,23,356	0/0:27,0:28:47.45:0,47,779	0/0:24,0:24:57.17:0,57,913	0/0:29,0:17:40.64:0,41,632	0/0:35,0:35:59.95:0,60,929	0/0:102,1:93:99:0,105,2261	0/0:40,0:40:78.07:0,78,1215	0/0:29,0:29:57.54:0,58,881	0/0:48,0:47:61.71:0,62,1027	0/0:25,0:25:45.34:0,45,759	0/0:40,0:35:90.31:0,90,1520	0/0:26,0:25:44.77:0,45,729	0/0:15,0:15:42.11:0,42,627
chr10	11487619	.	A	ATG	8023.57	PASS	AB=0.754;AC=38;AF=0.679;AN=56;BaseQRankSum=0.031;DP=898;FS=4.281;HRun=0;HaplotypeScore=326.2028;InbreedingCoeff=0.5746;MQ=39.87;MQ0=41;MQRankSum=0.028;QD=12.94;ReadPosRankSum=2.202;VQSLOD=4.2086;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:22,13:32:11.23:162,11,0	1/1:9,5:13:5.94:89,6,0	0/0:34,0:5:9.02:0,9,98	0/0:27,0:3:9.03:0,9,106	1/1:9,17:25:18.76:294,19,0	1/1:10,0:18:7.80:55,8,0	1/1:11,1:15:5.99:71,6,0	0/0:55,0:34:62.97:0,63,748	1/1:12,19:29:20.64:338,21,0	0/1:28,15:38:24.23:824,0,24	1/1:14,13:27:26.71:369,27,0	1/1:23,24:44:40.80:651,41,0	1/1:16,20:36:59.10:878,59,0	1/1:9,23:31:21.65:417,22,0	1/1:17,25:42:24.30:543,24,0	1/1:13,14:25:15.05:243,15,0	1/1:14,8:23:17.98:263,18,0	0/1:16,6:22:53.35:210,0,53	0/0:37,0:21:32.63:0,33,527	0/0:37,0:37:42.10:0,42,513	0/0:62,0:55:47.81:0,48,572	1/1:16,14:31:2.24:333,2,0	1/1:22,17:40:15.31:197,15,0	0/1:18,12:30:41.07:377,0,41	0/0:24,0:24:17.77:0,18,126	1/1:21,17:34:66.04:945,66,0	0/1:15,6:21:17.26:256,0,17	1/1:8,10:18:33.10:510,33,0
chr10	11487647	.	A	ATG	12061.94	PASS	AB=0.663;AC=48;AF=0.857;AN=56;BaseQRankSum=4.873;DP=761;FS=3.411;HRun=0;HaplotypeScore=372.9207;InbreedingCoeff=0.3964;MQ=38.49;MQ0=22;MQRankSum=-2.688;QD=17.90;ReadPosRankSum=-0.892;VQSLOD=4.1300;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,15:26:35.25:553,35,0	1/1:2,10:12:30.10:493,30,0	0/0:44,0:17:44.66:0,45,505	0/0:42,0:14:27.06:0,27,322	1/1:9,13:21:0.70:2,1,0	1/1:4,15:19:34.98:548,35,0	0/1:7,3:10:25.41:133,0,25	1/1:19,19:23:30.02:428,30,0	1/1:13,13:26:35.86:580,36,0	1/1:16,15:28:51.17:829,51,0	1/1:5,14:19:8.83:145,9,0	1/1:15,25:37:66.23:1081,66,0	1/1:14,26:40:43.75:1240,44,0	0/1:11,20:31:10.60:338,0,11	1/1:15,23:37:10.68:700,11,0	1/1:7,14:21:30.10:493,30,0	0/1:8,8:16:14.20:279,0,14	1/1:12,5:17:15.30:284,15,0	1/1:11,8:18:21.07:346,21,0	0/1:13,24:37:41.88:398,0,42	1/1:23,14:32:14.45:247,14,0	1/1:11,15:26:12.03:198,12,0	1/1:10,22:32:24.53:363,25,0	1/1:13,15:27:13.53:214,14,0	1/1:9,19:28:33.10:517,33,0	1/1:12,16:28:22.63:829,23,0	1/1:9,7:16:21.07:343,21,0	1/1:4,9:13:30.10:479,30,0
chr10	11488921	.	T	TTG	4530.66	PASS	AB=0.736;AC=24;AF=0.444;AN=54;BaseQRankSum=-8.421;DP=764;FS=1.034;HRun=0;HaplotypeScore=114.1504;InbreedingCoeff=-0.1456;MQ=65.71;MQ0=10;MQRankSum=1.162;QD=8.94;ReadPosRankSum=-3.116;VQSLOD=4.2601;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:28,18:46:42.23:244,0,42	1/1:8,4:12:3:45,3,0	./.	0/0:32,0:23:3:0,3,27	0/1:11,7:19:9.09:272,0,9	0/0:16,0:29:14.20:0,14,70	0/0:21,0:43:9.49:0,9,53	1/1:36,1:36:6.17:294,6,0	0/1:16,8:25:64.52:183,0,65	0/1:24,3:26:18.14:148,0,18	0/1:9,8:17:48.28:151,0,48	0/0:20,0:29:22.83:0,23,124	0/0:12,0:22:19.41:0,19,127	0/0:10,0:23:33.93:0,34,165	0/1:20,10:32:67.43:254,0,67	0/1:9,7:16:18.63:130,0,19	0/1:11,19:32:18.17:583,0,18	1/1:13,7:23:12.60:328,13,0	0/1:19,1:19:21.05:96,0,21	1/1:13,8:21:18.06:259,18,0	0/1:51,17:70:50.41:286,0,50	0/0:12,0:26:33.85:0,34,165	0/1:5,10:15:18.12:166,0,18	0/1:22,21:43:30.78:581,0,31	0/0:21,0:26:41.28:0,41,367	0/1:22,6:29:98.76:240,0,99	0/1:10,6:17:42.26:228,0,42	1/1:5,0:5:3.01:42,3,0
chr10	11489590	.	CAG	C	659.70	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=0.107;DP=528;FS=5.088;HRun=0;HaplotypeScore=83.1191;InbreedingCoeff=0.9948;MQ=84.82;MQ0=0;MQRankSum=-2.664;QD=38.81;ReadPosRankSum=-1.250;VQSLOD=4.9284;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:96.33:0,96,1883	0/0:10,0:10:30.10:0,30,564	0/0:23,0:23:69.24:0,69,1323	0/0:13,0:13:39.13:0,39,731	0/0:23,0:23:63.20:0,63,1228	0/0:14,0:14:42.14:0,42,843	1/1:2,15:17:50.97:755,51,0	0/0:25,0:25:75.24:0,75,1362	0/0:24,0:24:69.21:0,69,1303	0/0:28,0:28:84.28:0,84,1675	0/0:18,0:18:51.17:0,51,1011	0/0:13,0:13:33.11:0,33,670	0/0:19,0:19:57.17:0,57,1075	0/0:13,0:13:36.12:0,36,730	0/0:24,0:24:72.22:0,72,1369	0/0:12,0:12:36.10:0,36,659	0/0:28,0:28:84.23:0,84,1581	0/0:17,0:17:51.16:0,51,999	0/0:23,0:23:69.22:0,69,1319	0/0:24,0:24:69.23:0,69,1344	0/0:19,0:19:51.17:0,51,1015	0/0:15,0:15:42.14:0,42,852	0/0:16,0:16:48.16:0,48,973	0/0:16,0:16:45.11:0,45,873	0/0:15,0:15:39.13:0,39,769	0/0:19,0:19:57.18:0,57,1091	0/0:21,0:21:57.20:0,57,1136	0/0:7,0:7:21.07:0,21,426
chr10	11489627	.	GA	G	8915.60	PASS	AB=0.556;AC=51;AF=0.911;AN=56;BaseQRankSum=-0.321;DP=525;FS=1.187;HRun=11;HaplotypeScore=70.1636;InbreedingCoeff=0.5907;MQ=74.49;MQ0=4;MQRankSum=-1.045;QD=18.12;ReadPosRankSum=0.792;VQSLOD=5.8102;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,32:32:92.89:764,93,0	1/1:2,12:15:37.99:302,38,0	0/0:14,0:10:2.97:0,3,32	0/0:19,0:14:4.16:0,4,73	1/1:1,21:22:62.93:517,63,0	1/1:1,17:18:47.94:394,48,0	1/1:4,12:16:32.93:271,33,0	1/1:4,20:24:59.88:484,60,0	1/1:3,15:18:30.31:352,30,0	1/1:3,19:22:53.93:443,54,0	1/1:4,13:17:38.95:320,39,0	1/1:1,0:13:16.29:47,16,0	1/1:1,0:21:38.70:112,39,0	1/1:0,0:14:26.48:76,26,0	1/1:5,19:25:58.96:474,59,0	1/1:1,12:13:35.96:296,36,0	1/1:5,27:32:77.90:640,78,0	0/1:3,12:15:22.02:254,0,22	1/1:2,20:22:56.91:465,57,0	1/1:4,16:20:15.95:337,16,0	1/1:1,9:10:20.97:172,21,0	1/1:3,0:15:22.40:65,22,0	1/1:4,17:21:47.94:394,48,0	1/1:2,10:12:26.96:222,27,0	1/1:0,12:12:32.96:271,33,0	1/1:2,20:22:30.92:457,31,0	1/1:1,25:27:41.97:540,42,0	1/1:2,11:13:29.94:246,30,0
chr10	11491338	.	T	TTGTGTGTGTGTGTG	15838.33	PASS	AB=1.000;AC=54;AF=0.964;AN=56;BaseQRankSum=-0.087;DP=776;FS=1.620;HRun=0;HaplotypeScore=309.2604;InbreedingCoeff=0.0923;MQ=60.04;MQ0=14;MQRankSum=0.148;QD=20.41;ReadPosRankSum=1.870;VQSLOD=2.5790;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:30,12:43:12.04:599,12,0	1/1:11,0:10:6.01:91,6,0	0/1:38,0:22:19.25:19,0,45	0/1:49,0:30:3.63:4,0,175	1/1:8,0:25:6.02:197,6,0	1/1:15,0:15:12.02:220,12,0	1/1:34,0:33:18.53:356,19,0	1/1:36,0:35:48.77:988,49,0	1/1:34,0:35:30.07:927,30,0	1/1:26,0:25:42.14:1326,42,0	1/1:19,0:19:3.01:66,3,0	1/1:27,0:24:24.55:688,25,0	1/1:21,0:20:20.74:672,21,0	1/1:27,0:27:12.04:311,12,0	1/1:23,0:43:15.05:609,15,0	1/1:37,0:34:39.12:1256,39,0	1/1:14,14:30:21.07:847,21,0	1/1:18,0:18:20.56:841,21,0	1/1:24,0:23:21.84:607,22,0	1/1:16,0:16:9.03:285,9,0	1/1:33,0:32:16.26:191,16,0	1/1:20,0:20:6.02:153,6,0	1/1:14,0:24:6.02:239,6,0	1/1:29,0:29:18.51:361,19,0	1/1:12,0:12:9.03:219,9,0	1/1:36,0:35:72.20:2201,72,0	1/1:28,0:28:23.10:795,23,0	1/1:4,7:13:15.05:771,15,0
chr10	11491366	.	GTTCA	G	1991.54	PASS	AB=0.927;AC=18;AF=0.321;AN=56;BaseQRankSum=2.259;DP=754;FS=65.398;HRun=0;HaplotypeScore=191.0903;InbreedingCoeff=-0.4985;MQ=55.02;MQ0=20;MQRankSum=-1.832;QD=4.33;ReadPosRankSum=0.089;VQSLOD=0.6698;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:33:78.40:0,78,1509	0/0:11,0:10:2.13:0,2,458	0/0:52,0:21:56.92:0,57,1325	0/0:56,0:31:73.60:0,74,1739	0/0:22,0:22:43.36:0,43,1082	0/1:16,0:16:91.49:91,0,558	0/1:33,1:32:33.25:33,0,1294	0/1:22,8:29:99:268,0,1207	0/1:31,1:32:98.09:98,0,912	0/1:20,3:22:99:155,0,1169	0/0:18,2:20:21.85:0,22,485	0/1:27,0:24:94.04:94,0,511	0/1:19,3:21:93.03:93,0,996	0/1:20,0:20:89.82:90,0,642	0/0:43,0:42:74.33:0,74,1782	0/1:42,0:39:99:102,0,1477	0/0:15,0:14:32.13:0,32,526	0/1:16,5:21:50.77:51,0,809	0/1:13,3:15:99:114,0,379	0/1:16,0:16:91.85:92,0,324	0/1:35,1:35:81.84:82,0,850	0/1:19,1:20:69.41:69,0,648	0/0:29,0:29:24.37:0,24,1159	0/1:34,0:34:12.31:12,0,1000	0/1:19,1:20:53.34:53,0,969	0/1:17,12:28:99:509,0,956	0/1:21,1:22:99:142,0,690	0/0:10,0:10:3.79:0,4,308
chr10	11491367	.	TTC	T	1154.80	PASS	AB=0.934;AC=18;AF=0.321;AN=56;BaseQRankSum=6.103;DP=734;FS=77.480;HRun=0;HaplotypeScore=174.6250;InbreedingCoeff=-0.4660;MQ=57.83;MQ0=20;MQRankSum=-2.604;QD=2.75;ReadPosRankSum=1.004;VQSLOD=-0.0145;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:75.71:0,76,1035	0/0:10,1:10:24.04:0,24,331	0/0:54,0:23:44.41:0,44,959	0/0:56,0:31:44.66:0,45,1161	0/0:22,0:22:22.34:0,22,716	0/1:15,0:15:25.96:26,0,378	0/1:32,1:31:17.73:18,0,866	0/1:24,2:25:99:191,0,832	0/1:25,5:30:78.17:78,0,596	0/1:20,2:21:75.03:75,0,751	0/0:12,8:20:21.07:0,21,326	0/1:22,4:23:52.32:52,0,376	0/1:22,0:21:53.45:53,0,649	0/1:17,2:19:74.51:75,0,428	0/0:41,0:40:56.16:0,56,1187	0/1:42,1:40:99:106,0,1084	0/0:14,1:14:30.97:0,31,385	0/1:18,2:20:32.84:33,0,538	0/1:16,0:16:74:74,0,363	0/1:14,0:14:42.07:42,0,215	0/0:32,1:32:31.12:0,31,631	0/1:18,1:19:43.02:43,0,435	0/0:30,0:29:27.37:0,27,811	0/1:28,6:34:6.61:7,0,684	0/1:20,0:20:26.44:26,0,646	0/1:29,2:30:99:315,0,756	0/1:13,7:20:83.45:83,0,463	0/1:10,0:10:17.41:17,0,191
chr10	11492914	.	TAAA	T	1443.85	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.690;DP=713;FS=6.056;HRun=9;HaplotypeScore=105.5916;InbreedingCoeff=0.9988;MQ=82.24;MQ0=3;MQRankSum=-3.460;QD=32.09;ReadPosRankSum=-0.178;VQSLOD=2.5535;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:99:0,99,2080	0/0:8,0:8:24.08:0,24,509	0/0:53,0:37:80.27:0,80,1330	0/0:30,0:23:40.88:0,41,680	0/0:35,0:35:87.29:0,87,1757	1/1:1,21:22:63.17:865,63,0	1/1:2,21:23:51.13:701,51,0	0/0:21,0:21:57.19:0,57,1167	0/0:22,0:22:57.17:0,57,1120	0/0:41,0:41:99:0,111,2294	0/0:31,0:31:90.31:0,90,1896	0/0:26,0:26:63.22:0,63,1304	0/0:18,0:18:48.16:0,48,1019	0/0:22,0:22:54.19:0,54,1140	0/0:21,0:21:60.21:0,60,1245	0/0:27,0:28:79.48:0,79,1569	0/0:26,0:26:66.23:0,66,1402	0/0:19,0:18:51.18:0,51,1069	0/0:22,0:22:54.16:0,54,1069	0/0:31,0:31:84.28:0,84,1697	0/0:12,0:12:33.11:0,33,701	0/0:18,0:18:51.18:0,51,1068	0/0:34,0:34:87.30:0,87,1797	0/0:16,0:16:45.15:0,45,956	0/0:23,0:23:66.20:0,66,1354	0/0:31,0:31:78.74:0,79,1629	0/0:27,0:27:76.50:0,77,1548	0/0:17,0:18:54.16:0,54,1050
chr10	11493579	.	A	AT	1928.48	PASS	AB=0.909;AC=10;AF=0.179;AN=56;BaseQRankSum=-7.321;DP=665;FS=0.452;HRun=10;HaplotypeScore=115.8203;InbreedingCoeff=0.7563;MQ=73.63;MQ0=0;MQRankSum=1.054;QD=15.94;ReadPosRankSum=-3.465;VQSLOD=2.4755;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,1:40:43.45:0,43,637	0/0:7,0:7:20.98:0,21,172	0/1:18,0:15:16.83:17,0,60	0/0:22,0:21:19.17:0,19,188	0/0:19,0:19:44.87:0,45,361	0/0:3,0:23:38.70:0,39,112	0/0:4,0:17:26.46:0,26,76	1/1:6,20:28:59.91:587,60,0	0/0:28,0:28:62.88:0,63,517	0/0:32,0:31:83.88:0,84,690	0/0:17,0:17:44.94:0,45,369	0/0:23,0:24:58.92:0,59,469	0/0:19,0:19:47.93:0,48,394	0/0:20,0:20:44.90:0,45,364	0/0:19,0:19:47.94:0,48,394	0/0:32,0:32:68.88:0,69,561	0/0:42,0:42:99:0,102,832	0/0:27,0:27:65.80:0,66,531	1/1:5,15:20:42.09:439,42,0	1/1:5,19:24:53.15:538,53,0	1/1:2,18:22:47.82:477,48,0	0/0:36,0:36:83.86:0,84,687	0/0:20,0:20:44.93:0,45,369	0/0:26,0:26:68.91:0,69,567	0/0:18,0:18:50.93:0,51,416	0/0:27,0:27:62.73:0,63,503	0/0:28,0:29:70.86:0,71,562	0/1:7,2:9:40:40,0,124
chr10	11496570	.	CTT	C	8637.21	PASS	AB=1.000;AC=50;AF=0.893;AN=56;BaseQRankSum=-1.680;DP=531;FS=3.794;HRun=6;HaplotypeScore=102.9833;InbreedingCoeff=0.5902;MQ=66.91;MQ0=21;MQRankSum=1.756;QD=20.76;ReadPosRankSum=3.636;VQSLOD=2.6839;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:19:37.97:267,38,0	1/1:6,0:6:15.01:153,15,0	0/0:50,0:15:18.41:0,18,258	0/0:65,0:32:32.48:0,32,426	1/1:23,0:23:59.02:568,59,0	0/1:17,0:17:69.31:69,0,117	0/1:14,0:14:42.99:101,0,43	1/1:17,1:18:40.88:419,41,0	1/1:1,13:14:5.85:51,6,0	1/1:17,1:18:54.06:600,54,0	1/1:12,0:11:29.60:290,30,0	1/1:10,0:10:22.24:194,22,0	1/1:10,0:10:25.33:226,25,0	1/1:11,0:10:23:185,23,0	1/1:12,1:13:24.23:273,24,0	1/1:17,0:17:48.38:422,48,0	1/1:28,0:28:62.95:542,63,0	1/1:18,0:18:35.81:303,36,0	1/1:18,0:18:50.87:519,51,0	1/1:21,1:22:40.70:495,41,0	1/1:17,0:17:41.70:391,42,0	1/1:12,0:12:29.01:249,29,0	1/1:13,1:14:38.91:398,39,0	1/1:16,0:16:41.22:362,41,0	1/1:16,0:16:35.39:306,35,0	1/1:21,0:21:54.94:536,55,0	1/1:16,1:17:50.68:477,51,0	1/1:14,0:14:34.82:242,35,0
chr10	11496590	.	TC	T	4838.34	PASS	AB=0.990;AC=46;AF=0.821;AN=56;BaseQRankSum=0.981;DP=629;FS=36.294;HRun=1;HaplotypeScore=112.7784;InbreedingCoeff=0.4624;MQ=61.35;MQ0=22;MQRankSum=4.157;QD=9.20;ReadPosRankSum=-3.749;VQSLOD=-0.0426;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:19:30.18:132,30,0	1/1:7,0:6:13.24:75,13,0	0/0:38,0:10:15.29:0,15,147	0/0:47,0:20:11.35:0,11,153	1/1:16,1:17:36.90:230,37,0	0/0:17,0:17:22.21:0,22,232	0/1:21,0:20:62.97:63,0,159	1/1:17,3:20:3.03:106,3,0	1/1:23,1:24:22.19:200,22,0	1/1:24,0:24:53.48:276,53,0	1/1:20,1:21:13.63:152,14,0	0/1:16,0:16:8.12:24,0,8	1/1:19,0:19:32.95:238,33,0	1/1:15,0:14:29.55:157,30,0	1/1:20,0:20:22.87:174,23,0	1/1:19,1:20:31.20:252,31,0	1/1:38,1:39:50.64:445,51,0	0/1:22,0:22:10.45:109,0,10	0/1:22,1:23:19.46:137,0,19	1/1:17,1:18:11.04:186,11,0	1/1:16,1:17:32.02:204,32,0	1/1:21,0:21:18.98:170,19,0	1/1:17,2:19:40.32:270,40,0	1/1:30,3:33:64.81:378,65,0	1/1:28,0:27:47.15:206,47,0	1/1:24,4:27:36.88:296,37,0	1/1:17,1:18:8.05:178,8,0	1/1:15,1:16:30.01:181,30,0
chr10	11497015	.	TG	T	721.84	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.209;DP=750;FS=0.762;HRun=5;HaplotypeScore=71.1602;InbreedingCoeff=0.9997;MQ=85.52;MQ0=0;MQRankSum=-2.679;QD=24.89;ReadPosRankSum=2.565;VQSLOD=3.1241;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,111,1481	0/0:14,0:14:33.10:0,33,436	0/0:27,0:27:64.86:0,65,886	0/0:25,0:25:62.97:0,63,772	0/0:19,0:19:57.18:0,57,763	0/0:27,0:27:81.25:0,81,1091	0/0:31,0:31:90.29:0,90,1214	0/0:27,0:27:69.22:0,69,930	0/0:32,0:32:87.28:0,87,1174	0/0:33,0:33:96.30:0,96,1283	0/0:24,0:24:72.18:0,72,919	0/0:24,0:24:72.23:0,72,968	0/0:25,0:25:69.22:0,69,927	0/0:22,0:22:60.19:0,60,806	0/0:30,0:30:84.23:0,84,1087	0/0:27,0:27:78.26:0,78,1063	0/0:30,0:30:84.28:0,84,1148	0/0:27,0:27:75.21:0,75,978	0/0:16,0:16:48.16:0,48,656	0/0:28,0:28:81.25:0,81,1090	0/0:49,0:49:99:0,141,1877	0/0:26,0:26:72.23:0,72,966	0/0:20,0:20:57.17:0,57,747	0/0:25,0:25:72.22:0,72,953	1/1:2,27:29:72.21:817,72,0	0/0:25,0:25:75.24:0,75,1012	0/0:34,0:33:99:0,102,1393	0/0:15,0:15:45.15:0,45,616
chr10	11498281	.	TGA	T	4684.32	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=15.167;DP=709;FS=4.054;HRun=0;HaplotypeScore=115.0074;InbreedingCoeff=1.0000;MQ=83.37;MQ0=0;MQRankSum=-2.622;QD=41.09;ReadPosRankSum=3.533;VQSLOD=6.8366;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,141,2863	0/0:16,0:16:48.16:0,48,959	0/0:27,0:27:60.44:0,60,1436	0/0:15,0:15:45.15:0,45,843	0/0:31,0:31:93.32:0,93,1864	0/0:30,0:30:90.31:0,90,1829	0/0:21,0:21:63.22:0,63,1280	0/0:39,0:39:99:0,117,2365	0/0:22,0:22:66.23:0,66,1341	0/0:32,0:32:90.31:0,90,1789	0/0:20,0:20:60.21:0,60,1219	1/1:0,21:21:57.19:873,57,0	1/1:3,23:26:60.20:919,60,0	1/1:0,21:21:60.20:918,60,0	0/0:20,0:20:60.21:0,60,1217	0/0:26,0:26:78.27:0,78,1585	0/0:21,0:21:60.10:0,60,1219	0/0:17,0:17:51.18:0,51,1036	0/0:22,0:22:66.23:0,66,1315	0/0:29,0:29:87.28:0,87,1721	0/0:26,0:26:75.22:0,75,1484	1/1:0,27:27:75.25:1148,75,0	0/0:24,0:24:72.25:0,72,1452	0/0:28,0:28:84.27:0,84,1659	1/1:0,19:19:54.18:826,54,0	0/0:40,0:40:99:0,120,2304	0/0:20,0:20:60.21:0,60,1218	0/0:21,0:21:63.22:0,63,1272
chr10	11498509	.	CA	C	20410.36	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-1.730;DP=659;FS=1.195;HRun=3;HaplotypeScore=63.4103;InbreedingCoeff=0.9976;MQ=85.84;MQ0=0;MQRankSum=-11.275;QD=33.40;ReadPosRankSum=7.193;VQSLOD=4.4080;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,36:38:93.29:1153,93,0	1/1:0,10:10:30.09:372,30,0	0/0:24,0:24:66.22:0,66,943	0/0:24,0:24:72.16:0,72,981	1/1:0,30:30:87.27:1078,87,0	1/1:1,28:29:75.24:930,75,0	1/1:0,24:24:66.21:816,66,0	1/1:2,38:40:99:1413,114,0	1/1:0,27:27:78.25:967,78,0	1/1:2,22:24:66.21:819,66,0	1/1:1,16:17:39.12:483,39,0	1/1:0,16:16:48.15:595,48,0	1/1:0,30:30:72.23:891,72,0	1/1:1,26:27:63.20:778,63,0	1/1:0,28:28:72.23:893,72,0	1/1:0,22:22:63.20:781,63,0	1/1:1,24:25:66.21:817,66,0	1/1:0,18:18:54.17:669,54,0	1/1:0,18:18:54.17:669,54,0	1/1:0,21:21:57.18:707,57,0	1/1:0,27:27:69.22:856,69,0	1/1:0,17:17:42.13:521,42,0	1/1:1,7:8:21.07:260,21,0	1/1:2,17:19:51.16:632,51,0	1/1:0,16:16:45.14:558,45,0	1/1:2,30:32:90.28:1116,90,0	1/1:0,28:28:75.24:930,75,0	1/1:0,20:20:57.18:707,57,0
chr10	11501241	.	AGC	A	1555.01	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.064;DP=680;FS=0.602;HRun=0;HaplotypeScore=82.5528;InbreedingCoeff=0.9907;MQ=90.49;MQ0=0;MQRankSum=0.323;QD=34.56;ReadPosRankSum=0.353;VQSLOD=5.6626;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,114,2065	0/0:5,0:5:15.05:0,15,275	0/0:25,0:25:48.35:0,48,1148	0/0:28,0:28:75.17:0,75,1264	0/0:19,0:19:54.19:0,54,987	1/1:1,15:16:39.13:559,39,0	1/1:2,27:29:78.26:1118,78,0	0/0:27,0:27:78.27:0,78,1417	0/0:27,0:27:78.27:0,78,1423	0/0:25,0:25:69.24:0,69,1264	0/0:9,0:9:24.08:0,24,428	0/0:23,0:23:66.23:0,66,1195	0/0:26,0:26:72.22:0,72,1245	0/0:25,0:25:72.23:0,72,1268	0/0:23,0:23:69.24:0,69,1252	0/0:25,0:25:66.23:0,66,1185	0/0:39,0:39:99:0,108,1976	0/0:22,0:22:66.21:0,66,1178	0/0:30,0:30:80.24:0,80,1328	0/0:19,0:19:48.14:0,48,847	0/0:45,0:45:99:0,129,2349	0/0:20,0:20:54.17:0,54,956	0/0:23,0:23:69.24:0,69,1263	0/0:15,0:15:39.13:0,39,714	0/0:24,0:24:66.23:0,66,1208	0/0:30,0:30:78.26:0,78,1398	0/0:30,0:30:87.30:0,87,1592	0/0:12,0:12:36.12:0,36,659
chr10	11501435	.	TA	T	18955.52	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=0.983;DP=584;FS=0.632;HRun=2;HaplotypeScore=91.5417;InbreedingCoeff=0.9865;MQ=89.10;MQ0=0;MQRankSum=-10.375;QD=34.97;ReadPosRankSum=5.877;VQSLOD=4.7828;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,40:41:99:1479,114,0	1/1:0,6:6:18.06:234,18,0	0/0:25,0:25:48.28:0,48,894	0/0:17,0:17:51.07:0,51,655	1/1:1,14:15:36.12:466,36,0	1/1:0,20:20:57.19:740,57,0	1/1:0,27:27:75.24:973,75,0	1/1:0,28:28:84.25:1062,84,0	1/1:0,31:31:84.27:1090,84,0	1/1:3,15:18:45.13:568,45,0	1/1:0,10:10:30.09:379,30,0	1/1:1,21:22:60.19:778,60,0	1/1:0,20:20:57.19:740,57,0	1/1:1,23:24:60.20:779,60,0	1/1:0,25:25:66.21:857,66,0	1/1:0,16:16:48.16:623,48,0	1/1:0,19:19:51.17:662,51,0	1/1:0,21:21:57.18:738,57,0	1/1:1,12:13:30.10:389,30,0	1/1:0,12:12:36.12:463,36,0	1/1:1,42:43:99:1441,111,0	1/1:3,17:20:45.15:584,45,0	1/1:1,10:11:27.09:350,27,0	1/1:1,35:36:96.31:1246,96,0	1/1:0,12:12:33.11:428,33,0	1/1:1,20:21:60.19:774,60,0	1/1:0,24:24:72.21:918,72,0	1/1:0,7:7:15.05:195,15,0
chr10	11502491	.	C	CT	19000.69	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-7.974;DP=692;FS=41.212;HRun=8;HaplotypeScore=62.0323;InbreedingCoeff=0.9194;MQ=82.35;MQ0=0;MQRankSum=-8.121;QD=29.28;ReadPosRankSum=4.844;VQSLOD=2.5785;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,48:54:99:1477,121,0	1/1:0,16:16:45.13:519,45,0	0/0:24,0:24:57.12:0,57,487	0/0:19,0:19:4.13:0,4,167	1/1:2,16:18:49.35:542,49,0	1/1:0,17:17:48.14:554,48,0	1/1:4,24:28:49.86:768,50,0	1/1:2,21:23:63.15:696,63,0	1/1:1,22:23:57.17:658,57,0	1/1:0,30:30:90.19:1011,90,0	1/1:3,14:17:42.12:485,42,0	1/1:5,29:34:81.71:933,82,0	1/1:1,25:26:75.17:850,75,0	1/1:0,23:23:66.19:762,66,0	1/1:0,19:19:54.16:623,54,0	1/1:1,15:16:42.12:485,42,0	1/1:2,28:30:84.08:949,84,0	1/1:3,31:34:65.82:1011,66,0	1/1:5,29:34:87.21:972,87,0	1/1:5,18:23:52:576,52,0	1/1:2,19:21:54.09:606,54,0	1/1:2,17:19:48.14:554,48,0	1/1:5,12:17:30.09:346,30,0	1/1:3,23:26:66.20:762,66,0	1/1:0,19:19:57.17:657,57,0	1/1:5,23:28:69.19:787,69,0	1/1:4,30:34:72.21:831,72,0	1/1:2,17:19:51.15:588,51,0
chr10	11504300	.	C	CGTTT	17268.91	PASS	AB=0.591;AC=36;AF=0.643;AN=56;BaseQRankSum=-9.282;DP=700;FS=0.000;HRun=0;HaplotypeScore=117.2866;InbreedingCoeff=0.8328;MQ=65.29;MQ0=1;MQRankSum=-2.182;QD=34.47;ReadPosRankSum=1.180;VQSLOD=4.4605;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:33:40.38:610,40,0	1/1:0,7:7:19.31:433,19,0	0/0:33,0:28:15.02:0,15,213	0/0:22,0:21:9.03:0,9,137	1/1:18,0:29:36:539,36,0	0/0:25,0:25:48.15:0,48,736	0/0:21,0:21:45.12:0,45,678	1/1:35,0:34:39.10:712,39,0	0/1:7,9:17:17.66:614,0,18	1/1:7,19:28:18.48:1402,18,0	1/1:11,19:31:60.16:1332,60,0	0/0:19,0:19:42.14:0,42,657	0/0:23,0:23:45.14:0,45,692	0/0:19,0:19:27.09:0,27,423	1/1:8,9:17:24.08:574,24,0	1/1:3,19:22:48.16:1149,48,0	1/1:10,17:27:42.14:1005,42,0	1/1:9,19:28:13.83:1182,14,0	1/1:11,12:24:39.13:911,39,0	1/1:14,13:27:39.13:933,39,0	1/1:10,13:24:24.08:574,24,0	0/0:20,0:20:42.14:0,42,668	1/1:11,12:24:33.58:791,34,0	0/1:4,14:21:11.64:753,0,12	0/0:17,0:17:24.08:0,24,382	1/1:17,25:43:42.52:1921,43,0	1/1:12,14:24:29.90:685,30,0	1/1:21,16:37:48.16:1149,48,0
chr10	11504949	.	CTCTCTCTTTT	C	9748.15	PASS	AB=0.961;AC=49;AF=0.875;AN=56;BaseQRankSum=-4.287;DP=360;FS=2.860;HRun=0;HaplotypeScore=99.3030;InbreedingCoeff=0.4966;MQ=66.40;MQ0=25;MQRankSum=-0.604;QD=35.71;ReadPosRankSum=3.950;VQSLOD=4.3634;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:16,1:16:28.25:527,28,0	1/1:3,1:4:12.04:278,12,0	0/0:44,0:11:24.39:0,24,357	0/0:43,0:19:41.93:0,42,708	1/1:11,1:13:29.95:613,30,0	0/1:9,0:9:53.89:54,0,78	0/1:12,0:12:31.21:31,0,119	1/1:9,0:10:8.95:146,9,0	1/1:10,0:11:26.73:436,27,0	1/1:12,0:12:33.10:636,33,0	1/1:11,1:12:30.09:556,30,0	1/1:10,0:10:22.43:310,22,0	1/1:8,0:8:20.96:312,21,0	1/1:5,0:6:17.64:284,18,0	1/1:15,0:16:45.08:731,45,0	1/1:12,0:10:30.08:527,30,0	0/1:13,2:14:0.22:581,0,0	1/1:7,0:7:14.81:254,15,0	1/1:10,1:10:20.77:362,21,0	1/1:10,0:8:15.20:284,15,0	1/1:4,0:3:6.02:106,6,0	1/1:7,0:8:15.02:260,15,0	1/1:10,0:10:25.74:502,26,0	1/1:7,1:8:15.05:289,15,0	1/1:15,0:15:30.07:446,30,0	1/1:8,0:9:21.05:359,21,0	1/1:10,0:12:36.12:732,36,0	1/1:7,0:7:11.74:133,12,0
chr10	11504950	.	TCTCTC	T	9095.47	PASS	AB=0.900;AC=51;AF=0.911;AN=56;BaseQRankSum=-4.372;DP=352;FS=8.241;HRun=0;HaplotypeScore=71.8004;InbreedingCoeff=0.6273;MQ=64.75;MQ0=26;MQRankSum=-2.683;QD=34.19;ReadPosRankSum=3.579;VQSLOD=3.9915;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,3:15:30.54:480,31,0	1/1:4,0:4:12.04:239,12,0	0/0:43,0:10:23.73:0,24,302	0/0:43,0:19:41.41:0,41,669	1/1:10,2:12:29.81:539,30,0	0/1:8,1:9:13.23:118,0,13	1/1:11,0:11:3.62:156,4,0	1/1:9,0:9:8.88:101,9,0	1/1:10,0:10:26.69:366,27,0	1/1:0,12:12:33.10:637,33,0	1/1:10,1:10:30.08:512,30,0	1/1:7,2:9:23.59:299,24,0	1/1:8,2:10:17.24:297,17,0	1/1:6,0:6:17.40:254,17,0	1/1:14,2:16:45.48:632,45,0	1/1:12,0:10:29.56:432,30,0	1/1:16,0:15:17.71:502,18,0	1/1:8,0:7:17.88:223,18,0	1/1:12,1:10:16.80:290,17,0	1/1:6,4:8:15.93:269,16,0	1/1:3,2:4:5.28:121,5,0	1/1:4,2:6:15.04:272,15,0	1/1:11,0:11:28.43:476,28,0	1/1:7,1:7:14.54:226,15,0	1/1:12,2:13:29.66:499,30,0	1/1:7,1:7:21.05:326,21,0	1/1:11,2:13:36.59:716,37,0	1/1:5,1:6:8.35:112,8,0
chr10	11504985	.	CT	C	3084.49	PASS	AB=0.865;AC=50;AF=0.962;AN=52;BaseQRankSum=-0.991;DP=352;FS=0.000;HRun=8;HaplotypeScore=49.1931;InbreedingCoeff=-0.0853;MQ=25.19;MQ0=95;MQRankSum=1.183;QD=8.99;ReadPosRankSum=1.026;VQSLOD=0.6306;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:21,6:12:12.01:116,12,0	1/1:3,4:5:12.01:111,12,0	./.	./.	1/1:8,6:13:9:87,9,0	1/1:7,7:10:21.02:202,21,0	1/1:6,5:7:12.01:116,12,0	0/1:12,7:13:12.03:179,0,12	1/1:5,4:8:11.98:115,12,0	1/1:9,11:17:33.04:318,33,0	1/1:3,6:9:12.01:115,12,0	1/1:10,4:10:8.76:70,9,0	1/1:9,1:7:2.90:29,3,0	1/1:7,4:8:11.80:99,12,0	1/1:1,6:7:12.02:116,12,0	1/1:6,5:8:12.01:115,12,0	1/1:17,9:16:17.66:173,18,0	1/1:11,2:8:3:29,3,0	1/1:7,7:11:20.99:203,21,0	1/1:8,11:13:27.04:260,27,0	1/1:6,1:2:3:29,3,0	1/1:2,5:7:12.01:115,12,0	1/1:5,4:7:12.02:116,12,0	1/1:9,2:8:4.87:56,5,0	1/1:7,5:8:6:58,6,0	1/1:9,6:7:14.97:135,15,0	1/1:4,8:10:20.82:202,21,0	0/1:15,0:9:21.41:21,0,28
chr10	11505946	.	G	GTTGCA	2762.18	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-4.210;DP=783;FS=5.255;HRun=0;HaplotypeScore=137.7035;InbreedingCoeff=0.9998;MQ=82.00;MQ0=0;MQRankSum=-7.222;QD=56.37;ReadPosRankSum=-1.603;VQSLOD=3.9370;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:64,0:64:99:0,178,3589	0/0:16,0:16:48.16:0,48,994	0/0:30,0:30:75.25:0,75,1473	0/0:27,0:27:72.20:0,72,1401	0/0:25,0:25:63.22:0,63,1245	1/1:3,16:19:42.14:1289,42,0	1/1:6,21:30:63:1595,63,0	0/0:25,0:25:69.23:0,69,1396	0/0:30,0:30:81.25:0,81,1598	0/0:28,0:28:75.24:0,75,1452	0/0:17,0:17:51.16:0,51,1018	0/0:30,0:30:90.30:0,90,1817	0/0:28,0:28:78.27:0,78,1597	0/0:32,0:32:90.29:0,90,1826	0/0:22,0:22:63.22:0,63,1293	0/0:32,0:32:84.29:0,84,1709	0/0:37,0:37:99:0,108,2182	0/0:28,0:28:75.19:0,75,1472	0/0:28,0:28:78.26:0,78,1542	0/0:28,0:28:72.25:0,72,1459	0/0:39,0:39:99:0,105,2134	0/0:20,0:20:57.20:0,57,1164	0/0:19,0:19:57.20:0,57,1182	0/0:38,0:37:99:0,105,2137	0/0:13,0:13:33.11:0,33,672	0/0:28,0:28:75.25:0,75,1480	0/0:33,0:33:81.26:0,81,1624	0/0:17,0:17:51.18:0,51,1057
chr10	11506592	.	CTGTGTGTACTCTCCACACCCGTGCA	C	20338.98	PASS	AB=0.541;AC=45;AF=0.833;AN=54;BaseQRankSum=11.096;DP=765;FS=1.691;HRun=0;HaplotypeScore=295.9760;InbreedingCoeff=0.6614;MQ=68.31;MQ0=1;MQRankSum=-6.628;QD=31.10;ReadPosRankSum=3.666;VQSLOD=3.0278;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:7,39:46:55.72:318,0,56	1/1:1,13:14:18.53:886,19,0	0/0:24,0:21:45.08:0,45,1458	0/0:19,0:19:35.16:0,35,1738	1/1:1,25:26:32.83:581,33,0	0/0:28,0:28:75.22:0,75,5924	0/0:25,0:25:57.03:0,57,2765	1/1:1,26:27:78.04:1094,78,0	1/1:3,22:25:9.03:582,9,0	1/1:1,31:32:65.66:1515,66,0	./.	1/1:1,43:44:24.08:1589,24,0	1/1:3,32:35:26.64:1790,27,0	1/1:3,28:31:12.04:750,12,0	1/1:1,34:35:33.11:2028,33,0	1/1:2,15:17:3.01:201,3,0	1/1:2,19:21:5.95:218,6,0	1/1:4,27:31:3.01:116,3,0	1/1:2,18:20:54.05:1350,54,0	1/1:1,22:23:27.01:871,27,0	1/1:6,60:66:6.02:225,6,0	1/1:3,16:19:17.95:893,18,0	1/1:2,19:21:9.03:327,9,0	1/1:3,27:30:2.92:200,3,0	1/1:1,28:29:21.07:1255,21,0	1/1:4,25:29:59.70:2345,60,0	1/1:4,13:17:9.03:602,9,0	1/1:2,14:16:9.03:602,9,0
chr10	11506779	.	TC	T	1088.96	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=10.777;DP=767;FS=1.888;HRun=1;HaplotypeScore=85.1326;InbreedingCoeff=0.9989;MQ=85.35;MQ0=0;MQRankSum=-4.851;QD=24.20;ReadPosRankSum=0.980;VQSLOD=3.7045;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,157,2446	0/0:8,0:8:24.08:0,24,381	0/0:27,0:27:78.22:0,78,1194	0/0:26,0:26:69.01:0,69,1079	0/0:35,0:35:99:0,102,1625	1/1:1,22:23:69.10:682,69,0	1/1:0,22:22:62.94:529,63,0	0/0:34,0:34:99:0,102,1629	0/0:26,0:26:75.25:0,75,1186	0/0:31,0:31:93.30:0,93,1446	0/0:21,0:21:63.21:0,63,1007	0/0:29,0:29:81.28:0,81,1281	0/0:19,0:19:54.17:0,54,836	0/0:25,0:25:72.25:0,72,1145	0/0:28,0:28:84.29:0,84,1342	0/0:29,0:29:84.29:0,84,1341	0/0:37,0:37:99:0,111,1775	0/0:29,0:29:84.29:0,84,1334	0/0:24,0:24:72.22:0,72,1100	0/0:27,0:27:75.24:0,75,1174	0/0:37,0:37:99:0,111,1663	0/0:21,0:21:60.19:0,60,936	0/0:22,0:22:66.22:0,66,1051	0/0:39,0:39:99:0,117,1824	0/0:22,0:22:63.20:0,63,981	0/0:31,0:31:93.31:0,93,1466	0/0:27,0:27:81.25:0,81,1257	0/0:14,0:14:42.14:0,42,662
chr10	11506781	.	TAA	T	1160.95	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=10.895;DP=767;FS=1.225;HRun=4;HaplotypeScore=100.7451;InbreedingCoeff=0.9979;MQ=85.84;MQ0=0;MQRankSum=-4.180;QD=26.39;ReadPosRankSum=1.308;VQSLOD=2.1745;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,150,2742	0/0:7,0:7:21.07:0,21,393	0/0:27,0:27:72.24:0,72,1219	0/0:28,0:28:75.19:0,75,1240	0/0:35,0:35:99:0,99,1800	1/1:0,22:22:66.16:706,66,0	1/1:2,20:22:63.04:577,63,0	0/0:34,0:34:96.33:0,96,1790	0/0:25,0:25:72.25:0,72,1344	0/0:33,0:33:96.33:0,96,1774	0/0:21,0:21:63.22:0,63,1159	0/0:29,0:29:81.23:0,81,1481	0/0:19,0:19:54.18:0,54,983	0/0:24,0:24:69.24:0,69,1292	0/0:28,0:28:84.29:0,84,1564	0/0:29,0:29:84.29:0,84,1556	0/0:38,0:38:99:0,114,2124	0/0:28,0:28:84.24:0,84,1476	0/0:25,0:25:75.25:0,75,1353	0/0:26,0:26:72.23:0,72,1318	0/0:38,0:38:99:0,111,2014	0/0:21,0:21:60.21:0,60,1115	0/0:22,0:22:63.22:0,63,1159	0/0:41,0:41:99:0,120,2156	0/0:21,0:21:57.17:0,57,1030	0/0:31,0:31:93.31:0,93,1707	0/0:26,0:26:78.26:0,78,1412	0/0:14,0:14:42.14:0,42,786
chr10	11507159	.	AAG	A	2529.30	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.702;DP=766;FS=7.451;HRun=0;HaplotypeScore=88.5253;InbreedingCoeff=0.9958;MQ=83.14;MQ0=0;MQRankSum=-1.002;QD=36.66;ReadPosRankSum=-0.691;VQSLOD=5.5345;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,144,2676	0/0:15,0:14:42.14:0,42,774	0/0:18,0:18:48.16:0,48,880	0/0:26,1:27:42.91:0,43,1213	0/0:33,0:33:96.33:0,96,1791	1/1:3,32:35:93.31:1370,93,0	1/1:0,34:34:87.29:1281,87,0	0/0:34,0:34:99:0,99,1831	0/0:28,0:28:78.27:0,78,1461	0/0:30,0:30:90.31:0,90,1644	0/0:17,0:17:48.13:0,48,835	0/0:20,0:20:57.18:0,57,1036	0/0:28,0:28:84.29:0,84,1563	0/0:25,0:25:75.26:0,75,1403	0/0:38,0:38:99:0,111,2024	0/0:30,0:30:90.31:0,90,1686	0/0:44,0:44:99:0,126,2348	0/0:18,0:18:54.19:0,54,1001	0/0:21,0:21:57.20:0,57,1067	0/0:21,0:21:63.22:0,63,1180	0/0:26,0:26:75.26:0,75,1389	0/0:24,0:24:69.24:0,69,1286	0/0:28,0:28:81.28:0,81,1516	0/0:41,0:41:99:0,123,2270	0/0:21,0:21:57.20:0,57,1057	0/0:30,0:30:90.30:0,90,1657	0/0:24,0:24:63.22:0,63,1180	0/0:6,0:6:18.06:0,18,337
chr10	11507349	.	A	AAAAC	27584.42	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-4.421;DP=749;FS=4.628;HRun=0;HaplotypeScore=130.6451;InbreedingCoeff=0.9804;MQ=55.82;MQ0=1;MQRankSum=-4.639;QD=42.83;ReadPosRankSum=4.389;VQSLOD=5.3557;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,35:44:91.55:2194,92,0	1/1:0,6:6:15.05:356,15,0	0/0:31,0:20:30.38:0,30,630	0/0:30,0:26:44.70:0,45,664	1/1:7,15:22:36.12:870,36,0	0/0:17,0:17:42.14:0,42,711	0/0:26,0:26:57.18:0,57,941	1/1:16,14:30:39.13:849,39,0	1/1:13,14:27:45.15:1086,45,0	1/1:5,18:23:54.18:1318,54,0	1/1:6,8:14:21.07:496,21,0	1/1:5,21:26:48.16:1104,48,0	1/1:9,15:24:29.14:675,29,0	1/1:7,22:30:48.16:1180,48,0	1/1:6,25:31:63.22:1573,63,0	1/1:10,26:38:66.23:1632,66,0	1/1:11,32:44:78.26:1948,78,0	1/1:8,15:23:30.10:749,30,0	1/1:16,16:31:54.18:1259,54,0	1/1:7,11:19:11.33:798,11,0	1/1:9,29:38:75.26:1850,75,0	1/1:8,17:25:48.16:1194,48,0	1/1:6,15:21:39.13:920,39,0	1/1:8,38:49:75.26:1845,75,0	1/1:5,12:17:27.09:674,27,0	1/1:3,26:30:78.20:1808,78,0	1/1:8,12:20:20.71:756,21,0	1/1:3,6:9:18.06:450,18,0
chr10	11507502	.	TG	T	25115.61	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-4.148;DP=785;FS=15.205;HRun=2;HaplotypeScore=108.2979;InbreedingCoeff=0.9998;MQ=81.52;MQ0=0;MQRankSum=-8.646;QD=36.09;ReadPosRankSum=7.138;VQSLOD=2.8678;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,51:55:99:1865,144,0	1/1:0,13:13:36.12:467,36,0	0/0:31,0:31:90.25:0,90,1297	0/0:21,0:21:63.17:0,63,906	1/1:0,21:21:60.20:779,60,0	0/0:13,0:13:39.13:0,39,574	0/0:24,0:24:69.22:0,69,1013	1/1:1,33:34:96.31:1246,96,0	1/1:0,28:28:78.25:1012,78,0	1/1:1,22:23:66.21:857,66,0	1/1:0,11:11:33.11:424,33,0	1/1:0,28:28:84.27:1087,84,0	1/1:1,26:27:75.24:973,75,0	1/1:1,38:39:99:1396,108,0	1/1:0,37:37:99:1402,108,0	1/1:1,34:35:87.28:1130,87,0	1/1:2,36:38:99:1363,105,0	1/1:2,27:29:72.23:935,72,0	1/1:0,30:30:90.29:1166,90,0	1/1:0,12:12:36.11:460,36,0	1/1:0,54:54:99:1909,147,0	1/1:1,21:22:60.19:777,60,0	1/1:0,33:33:99:1285,99,0	1/1:3,41:44:99:1441,111,0	1/1:1,21:22:63.20:818,63,0	1/1:0,25:25:75.23:960,75,0	1/1:0,17:17:51.17:662,51,0	1/1:0,19:19:54.18:701,54,0
chr10	11507744	.	T	TC	1066.79	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=3.490;DP=655;FS=0.000;HRun=7;HaplotypeScore=111.0568;InbreedingCoeff=0.9991;MQ=81.04;MQ0=0;MQRankSum=-1.516;QD=24.25;ReadPosRankSum=0.687;VQSLOD=2.9558;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,126,1193	0/0:10,0:10:30.05:0,30,290	0/0:17,0:17:33.97:0,34,316	0/0:21,0:20:40.93:0,41,362	0/0:19,0:19:51.08:0,51,492	1/1:1,21:23:54.03:630,54,0	1/1:3,17:21:48.01:558,48,0	0/0:17,0:17:39.03:0,39,364	0/0:19,0:19:51.08:0,51,492	0/0:19,0:19:45.05:0,45,428	0/0:11,0:12:29.08:0,29,267	0/0:28,0:28:78.11:0,78,748	0/0:23,0:23:54.08:0,54,521	0/0:23,0:23:63.07:0,63,598	0/0:28,0:28:69.06:0,69,645	0/0:18,0:18:48.08:0,48,463	0/0:30,0:30:75.07:0,75,710	0/0:25,0:25:63.06:0,63,599	0/0:22,0:22:48.02:0,48,454	0/0:20,0:20:48.05:0,48,454	0/0:52,0:53:99:0,137,1281	0/0:25,0:25:60.09:0,60,579	0/0:17,0:17:48.08:0,48,463	0/0:33,0:33:90.10:0,90,856	0/0:20,0:20:56.95:0,57,530	0/0:29,0:29:78.11:0,78,749	0/0:22,0:22:38.35:0,38,548	0/0:16,0:16:39.06:0,39,376
chr10	11508384	.	G	GAC	2484.38	PASS	AB=0.884;AC=37;AF=0.712;AN=52;BaseQRankSum=-1.832;DP=611;FS=0.000;HRun=0;HaplotypeScore=168.4559;InbreedingCoeff=-0.2091;MQ=57.81;MQ0=15;MQRankSum=0.130;QD=4.98;ReadPosRankSum=-0.788;VQSLOD=2.9936;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:42,1:43:77.37:151,0,77	0/1:7,0:7:27.27:34,0,27	./.	./.	1/1:16,0:17:2.69:45,3,0	1/1:7,0:8:5.93:41,6,0	1/1:22,0:29:29.10:216,29,0	1/1:23,0:23:5.96:43,6,0	0/1:19,2:21:74.74:75,0,85	1/1:16,1:17:11.82:105,12,0	0/1:10,5:15:33.99:34,0,58	1/1:21,0:18:4.82:17,5,0	1/1:16,0:18:5.92:43,6,0	0/0:24,0:22:2.59:0,3,10	1/1:6,1:18:4.09:68,4,0	0/1:14,3:17:37.98:120,0,38	0/1:21,7:28:34.99:306,0,35	1/1:11,2:13:3.94:195,4,0	0/1:10,1:9:14.65:56,0,15	0/1:14,2:15:21.30:77,0,21	0/1:45,11:52:49.93:179,0,50	1/1:23,0:24:19.85:227,20,0	1/1:16,2:18:2.51:43,3,0	0/1:22,3:25:48.55:98,0,49	1/1:26,0:27:19.46:177,19,0	0/0:19,0:18:12.46:0,12,120	0/1:15,2:17:10.73:243,0,11	1/1:4,0:4:3.01:41,3,0
chr10	11508390	.	C	CACAC	1856.84	PASS	AB=1.000;AC=39;AF=0.722;AN=54;BaseQRankSum=-1.170;DP=598;FS=4.247;HRun=0;HaplotypeScore=174.4164;InbreedingCoeff=-0.2108;MQ=50.73;MQ0=15;MQRankSum=0.205;QD=3.45;ReadPosRankSum=-0.850;VQSLOD=2.6198;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:40,0:39:21.40:21,0,120	0/1:4,0:4:33.90:34,0,40	0/1:33,0:15:0:0,0,0	./.	1/1:12,0:12:2.44:13,2,0	1/1:7,0:7:6.02:82,6,0	1/1:32,0:32:26.67:346,27,0	1/1:22,0:22:9.39:63,9,0	0/1:20,0:20:10.38:10,0,127	1/1:17,0:17:8.75:72,9,0	0/1:15,0:14:14.30:14,0,84	1/1:21,0:18:3.01:49,3,0	1/1:18,0:18:6.02:89,6,0	1/1:16,7:22:3.01:32,3,0	1/1:17,0:17:5.75:83,6,0	0/1:16,0:16:22.12:22,0,53	0/1:27,0:27:71.26:78,0,71	0/1:14,0:13:11.86:65,0,12	0/1:10,0:8:0.63:24,0,1	0/1:16,0:14:30.52:31,0,37	0/1:61,0:57:74.09:83,0,74	1/1:25,0:24:21.04:278,21,0	1/1:16,0:16:2.80:13,3,0	0/1:23,0:23:72.83:73,0,74	1/1:28,0:25:21:307,21,0	0/0:20,0:19:15.87:0,16,174	0/1:17,0:17:15.89:81,0,16	1/1:3,0:3:3.01:41,3,0
chr10	11508393	.	ACACACACACACACACACACACACACACCAACCACATCCCTGCAC	A	3104.62	PASS	AB=1.000;AC=31;AF=0.574;AN=54;BaseQRankSum=-1.517;DP=586;FS=19.174;HRun=0;HaplotypeScore=485.8344;InbreedingCoeff=0.4214;MQ=49.36;MQ0=18;MQRankSum=-0.890;QD=8.55;ReadPosRankSum=3.901;VQSLOD=0.3345;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:39,0:38:13.74:253,14,0	1/1:4,0:4:2.99:27,3,0	0/0:31,0:13:8.24:0,8,113	0/0:43,0:18:9.03:0,9,313	0/0:11,0:11:0:0,0,0	0/0:7,0:7:3.95:0,4,75	0/0:31,0:31:39.52:0,40,709	0/0:19,0:19:0:0,0,0	1/1:19,0:19:15.05:288,15,0	0/0:16,0:16:3.48:0,3,39	1/1:14,0:13:2.04:69,2,0	./.	1/1:18,0:18:3:72,3,0	0/0:25,0:22:2.94:0,3,18	1/1:17,0:17:4.26:140,4,0	1/1:16,0:16:12.04:276,12,0	1/1:27,0:27:15.40:411,15,0	1/1:13,0:12:11.99:202,12,0	1/1:9,0:7:6.02:108,6,0	1/1:15,0:13:5.98:72,6,0	1/1:62,0:57:15.87:434,16,0	0/1:26,0:24:7.37:7,0,17	0/0:9,7:16:0.47:0,0,1	1/1:22,0:22:7.78:174,8,0	0/1:26,0:23:5.16:162,0,5	0/1:19,0:18:52.70:300,0,53	1/1:17,0:17:12.01:261,12,0	0/0:3,0:3:0:0,0,0
chr10	11508412	.	C	CAGAG	578.99	PASS	AB=0.962;AC=8;AF=0.143;AN=56;BaseQRankSum=4.586;DP=492;FS=52.474;HRun=0;HaplotypeScore=153.4101;InbreedingCoeff=0.2701;MQ=45.79;MQ0=30;MQRankSum=-4.191;QD=5.91;ReadPosRankSum=1.464;VQSLOD=1.2982;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:23:32.90:0,33,450	0/0:4,0:4:7.98:0,8,104	0/0:52,0:15:34.65:0,35,457	0/0:55,0:11:20.74:0,21,327	0/0:6,0:6:5.98:0,6,54	1/1:7,0:7:6.90:116,7,0	0/1:27,6:33:2.08:509,0,2	0/0:11,0:11:28.40:0,28,346	0/0:9,0:9:20.83:0,21,306	0/0:11,0:11:27.04:0,27,311	0/0:10,0:9:8.58:0,9,129	1/1:13,0:10:0.88:2,1,0	0/1:12,0:12:10.56:11,0,18	0/0:19,0:16:4.56:0,5,38	0/1:13,0:13:27.29:27,0,40	0/0:11,0:11:17.63:0,18,181	0/0:20,0:20:47.19:0,47,491	0/0:10,0:9:25.16:0,25,253	0/0:8,0:7:17.89:0,18,216	0/0:11,0:9:14.96:0,15,190	0/0:52,0:47:28.73:0,29,317	0/0:22,0:20:18.43:0,18,137	0/0:13,0:13:2.84:0,3,17	0/0:15,0:15:20.07:0,20,261	0/1:20,0:17:34.55:35,0,35	0/0:14,0:13:30.57:0,31,479	0/0:12,0:12:22.95:0,23,197	0/0:4,0:4:8.23:0,8,69
chr10	11508416	.	C	CAT	1148.33	PASS	AB=1.000;AC=26;AF=0.464;AN=56;BaseQRankSum=4.718;DP=466;FS=2.856;HRun=0;HaplotypeScore=133.1836;InbreedingCoeff=-0.2632;MQ=45.53;MQ0=27;MQRankSum=-2.234;QD=3.88;ReadPosRankSum=1.906;VQSLOD=2.4593;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:21,0:20:55.41:55,0,196	0/1:4,0:4:6.96:7,0,60	0/0:53,0:16:17.03:0,17,183	0/0:60,0:10:20.67:0,21,162	1/1:6,0:6:2.63:21,3,0	1/1:7,0:7:11.31:95,11,0	1/1:21,6:27:30.86:353,31,0	0/0:9,0:9:15.69:0,16,143	0/1:9,0:9:35.90:36,0,142	0/0:10,0:10:2.64:0,3,106	0/1:10,0:9:17.09:17,0,81	0/0:11,0:9:2.92:0,3,17	1/1:11,0:11:1.57:7,2,0	0/0:17,0:14:5.95:0,6,46	0/1:13,0:13:9.52:28,0,10	0/1:9,0:9:66.65:67,0,67	0/1:20,0:20:99:151,0,139	0/1:10,0:9:55.79:64,0,56	0/1:7,0:7:14.53:15,0,86	0/1:11,0:9:29.30:29,0,57	0/1:49,0:43:68.39:99,0,68	0/1:22,0:20:43.28:57,0,43	1/1:13,0:13:2.50:25,2,0	0/1:15,0:15:11.97:12,0,82	0/1:18,0:15:13.05:42,0,13	0/0:10,0:9:23.90:0,24,257	0/1:10,0:10:37.54:119,0,38	0/1:4,0:4:11.50:11,0,12
chr10	11508481	.	C	CCA	1654.07	PASS	AB=0.813;AC=7;AF=0.125;AN=56;BaseQRankSum=-6.866;DP=589;FS=10.025;HRun=0;HaplotypeScore=145.6464;InbreedingCoeff=0.5216;MQ=50.66;MQ0=12;MQRankSum=1.509;QD=11.18;ReadPosRankSum=-1.939;VQSLOD=2.7575;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:21:38.95:0,39,444	0/0:6,0:8:20.71:0,21,197	0/0:48,0:21:11.36:0,11,132	0/1:53,0:19:6.32:6,0,129	0/0:10,0:12:14.70:0,15,128	0/0:2,0:13:22.73:0,23,112	0/0:7,0:26:56.77:0,57,278	1/1:13,12:23:25.28:633,25,0	0/0:16,0:17:47.98:0,48,555	0/0:29,0:30:77.84:0,78,843	0/0:10,0:10:15.52:0,16,181	0/0:25,0:25:54.13:0,54,627	0/0:18,0:21:47.63:0,48,498	0/0:20,0:20:42.11:0,42,489	0/0:18,0:18:36.11:0,36,434	0/0:7,0:7:19.61:0,20,220	0/0:20,0:21:53.78:0,54,581	0/0:18,0:19:41.59:0,42,424	0/1:7,3:10:10.42:155,0,10	1/1:2,5:7:15.05:241,15,0	0/1:27,26:52:43.33:757,0,43	0/0:21,0:22:33.08:0,33,375	0/0:18,0:18:27.55:0,28,326	0/0:29,0:30:53.79:0,54,604	0/0:12,0:15:33.23:0,33,351	0/0:15,0:14:36.09:0,36,413	0/0:17,0:17:51.07:0,51,587	0/0:7,0:7:15.05:0,15,181
chr10	11508587	.	TCACAGACA	T	13596.01	PASS	AB=1.000;AC=49;AF=0.875;AN=56;BaseQRankSum=0.720;DP=548;FS=6.390;HRun=0;HaplotypeScore=169.5393;InbreedingCoeff=0.7381;MQ=47.84;MQ0=13;MQRankSum=-1.800;QD=31.33;ReadPosRankSum=5.945;VQSLOD=3.9666;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:20,12:31:51.13:1157,51,0	1/1:4,7:11:24.55:590,25,0	0/0:50,0:20:29.33:0,29,967	0/0:62,0:30:45.76:0,46,1066	1/1:8,3:11:15.03:288,15,0	0/0:2,0:2:3.01:0,3,80	0/1:1,0:1:0:0,0,0	1/1:13,4:15:21.01:303,21,0	1/1:9,8:17:33.08:742,33,0	1/1:16,11:23:51.59:1006,52,0	1/1:7,6:13:5.90:160,6,0	1/1:4,21:25:45.15:1171,45,0	1/1:6,8:13:30.05:658,30,0	1/1:13,11:22:41.29:877,41,0	1/1:6,6:10:11.71:264,12,0	1/1:6,11:17:36.08:790,36,0	1/1:14,4:17:5.09:209,5,0	1/1:9,2:10:15.05:378,15,0	1/1:17,3:19:9.75:366,10,0	1/1:8,11:18:39.12:889,39,0	1/1:38,12:44:23.29:483,23,0	1/1:9,4:12:12.04:319,12,0	1/1:7,5:12:9.49:151,9,0	1/1:8,5:13:9.01:176,9,0	1/1:1,10:11:21.07:482,21,0	1/1:5,27:30:63.13:1518,63,0	1/1:4,5:9:21.07:441,21,0	1/1:3,2:5:8.98:178,9,0
chr10	11508602	.	C	CAT	55.46	PASS	AB=0.921;AC=5;AF=0.089;AN=56;BaseQRankSum=2.425;DP=580;FS=1.281;HRun=0;HaplotypeScore=223.6236;InbreedingCoeff=0.2306;MQ=35.82;MQ0=30;MQRankSum=-1.369;QD=0.58;ReadPosRankSum=-0.292;VQSLOD=2.4154;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:30:47.13:0,47,355	0/0:14,0:14:35.41:0,35,272	0/0:60,0:15:18.92:0,19,429	0/0:68,0:24:31.37:0,31,543	0/0:14,0:14:23.36:0,23,261	1/1:3,1:2:3.01:57,3,0	0/0:4,1:5:0.47:0,0,1	0/0:19,0:14:26.94:0,27,290	0/1:14,1:15:16.59:17,0,159	0/0:27,0:22:58.91:0,59,518	0/0:13,0:13:11.72:0,12,123	0/0:28,0:27:41.25:0,41,258	0/0:16,0:14:26.49:0,26,168	0/0:23,0:21:47.29:0,47,377	0/0:11,0:9:8.66:0,9,52	0/0:19,0:19:35.33:0,35,250	0/1:11,1:11:64.76:65,0,89	0/0:11,0:10:23.75:0,24,193	0/0:16,0:13:21.26:0,21,174	0/0:18,0:16:38.15:0,38,247	0/1:57,7:52:27.12:27,0,122	0/0:8,0:6:11.76:0,12,74	0/0:12,0:12:5.82:0,6,40	0/0:11,0:11:14.84:0,15,144	0/0:14,0:13:20.54:0,21,125	0/0:31,0:29:61.74:0,62,441	0/0:9,0:9:23.66:0,24,183	0/0:5,0:5:14.81:0,15,142
chr10	11508604	.	C	CCA	1258.07	PASS	AB=0.950;AC=21;AF=0.375;AN=56;BaseQRankSum=-5.762;DP=562;FS=1.153;HRun=0;HaplotypeScore=209.9281;InbreedingCoeff=-0.4020;MQ=36.75;MQ0=32;MQRankSum=1.714;QD=3.73;ReadPosRankSum=-5.626;VQSLOD=1.4726;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:32,1:30:82.86:83,0,240	0/0:14,0:14:36.60:0,37,340	0/0:55,0:13:32.62:0,33,494	0/0:65,0:21:46.55:0,47,639	0/1:12,2:14:99:101,0,213	1/1:4,0:2:1.25:3,1,0	0/0:5,0:5:0.47:0,0,1	0/1:18,0:13:54.69:55,0,236	0/1:14,0:14:34.74:35,0,153	0/0:24,1:20:11.73:0,12,456	0/1:11,1:12:53.97:54,0,81	0/0:28,0:27:5.33:0,5,215	0/1:13,1:12:57.60:58,0,88	0/1:19,2:20:99:111,0,222	0/0:9,1:8:8.76:0,9,57	0/0:17,0:17:3.32:0,3,145	0/1:12,0:11:22.65:23,0,109	0/1:9,1:10:99:124,0,131	0/1:13,0:9:23.34:23,0,124	0/1:17,1:16:99:215,0,104	0/1:61,4:53:45.67:154,0,46	0/1:6,2:6:31.96:32,0,45	1/1:11,0:11:5.90:85,6,0	0/1:10,1:11:24.85:25,0,130	0/1:15,0:14:77.56:86,0,78	0/1:32,0:30:28.93:29,0,302	0/1:9,0:9:45.58:120,0,46	0/0:4,0:4:11.93:0,12,136
chr10	11508628	.	A	AAC	4784.27	PASS	AB=0.775;AC=36;AF=0.643;AN=56;BaseQRankSum=-1.224;DP=555;FS=11.164;HRun=0;HaplotypeScore=240.8114;InbreedingCoeff=0.0064;MQ=45.12;MQ0=24;MQRankSum=-1.848;QD=9.78;ReadPosRankSum=2.190;VQSLOD=3.3612;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:22,15:37:21.59:442,0,22	0/1:11,4:15:37.83:175,0,38	0/0:41,0:18:10.67:0,11,348	0/1:46,0:14:8.46:8,0,150	0/1:5,10:15:15.63:273,0,16	0/0:5,0:3:6:0,6,51	0/0:7,0:7:9.21:0,9,63	0/1:15,0:13:39.14:39,0,161	1/1:8,7:16:11.90:284,12,0	0/1:12,8:16:23.27:374,0,23	0/1:3,7:9:27.33:89,0,27	1/1:14,0:24:20.98:189,21,0	1/1:13,0:17:12.85:110,13,0	1/1:10,1:19:26.99:234,27,0	0/1:4,7:10:2.25:89,0,2	1/1:9,7:16:9.77:280,10,0	1/1:11,3:14:20.25:236,20,0	1/1:7,7:15:30.49:436,30,0	0/1:11,0:9:36.20:36,0,99	0/0:12,0:12:3.01:0,3,37	0/1:45,1:61:42.47:42,0,267	0/1:6,0:8:27.99:28,0,28	1/1:8,9:16:10.89:184,11,0	0/1:12,8:21:6.58:329,0,7	1/1:9,6:14:12.04:183,12,0	1/1:16,11:24:21.77:463,22,0	1/1:6,3:9:8.35:134,8,0	1/1:3,2:5:9.02:125,9,0
chr10	11508644	.	GGC	G	1213.77	PASS	AB=0.944;AC=24;AF=0.429;AN=56;BaseQRankSum=7.800;DP=555;FS=37.124;HRun=0;HaplotypeScore=241.0911;InbreedingCoeff=-0.4435;MQ=47.65;MQ0=16;MQRankSum=-7.464;QD=2.69;ReadPosRankSum=-1.104;VQSLOD=1.3028;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:33,4:35:76:76,0,437	0/1:10,0:10:18.64:19,0,162	0/1:45,1:17:22.32:22,0,591	0/1:43,0:15:1.46:1,0,298	0/0:17,0:17:21.40:0,21,208	1/1:2,0:2:2.03:5,2,0	1/1:5,0:5:6.03:52,6,0	0/1:19,0:18:16.51:17,0,277	0/1:14,1:14:41.56:42,0,180	0/1:23,0:19:89.91:90,0,227	0/0:11,0:10:11.90:0,12,119	0/0:24,0:25:0.13:0,0,265	0/1:13,3:16:99:99,0,191	0/0:23,2:25:38.99:0,39,395	0/1:12,0:11:8.59:9,0,70	0/1:17,0:15:25.41:25,0,146	0/1:15,1:16:87.59:88,0,147	0/1:14,1:15:18.85:19,0,284	0/1:14,2:11:14.31:14,0,193	0/1:10,1:9:33.96:34,0,49	0/1:45,30:67:99:700,0,352	0/0:9,0:9:7.69:0,8,64	0/0:17,0:17:19.36:0,19,160	0/1:18,2:20:6.73:7,0,244	0/1:17,0:17:2.38:2,0,95	0/1:19,1:17:2.95:3,0,246	0/1:8,0:8:0.18:0,0,105	0/1:6,0:6:37.40:37,0,47
chr10	11508675	.	CCA	C	6067.62	PASS	AB=0.757;AC=36;AF=0.667;AN=54;BaseQRankSum=-3.426;DP=746;FS=6.702;HRun=0;HaplotypeScore=256.3497;InbreedingCoeff=-0.0219;MQ=48.58;MQ0=34;MQRankSum=-1.670;QD=9.77;ReadPosRankSum=4.111;VQSLOD=3.3806;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:22,18:42:38.05:507,0,38	1/1:4,3:7:6.02:73,6,0	0/0:60,0:14:6.28:0,6,82	0/1:60,0:17:3.62:4,0,194	1/1:12,9:19:14.03:140,14,0	./.	0/0:2,0:2:2.97:0,3,20	0/0:56,0:50:26.49:0,26,1081	1/1:4,9:13:23.02:239,23,0	1/1:16,18:31:64.60:747,65,0	1/1:7,6:12:14.26:154,14,0	0/1:14,14:27:99:412,0,119	0/1:15,9:24:99:302,0,103	1/1:11,18:29:26.18:530,26,0	1/1:5,8:11:24.06:280,24,0	1/1:10,8:16:23.88:269,24,0	0/1:8,5:16:35.77:216,0,36	1/1:14,6:20:11.60:329,12,0	0/1:26,0:23:62.67:63,0,110	0/1:9,0:8:5.56:6,0,50	0/1:85,0:90:25.83:26,0,405	0/1:12,9:20:99:181,0,283	0/1:10,7:16:18.99:194,0,19	0/1:15,12:28:62.27:149,0,62	0/1:11,13:23:36.62:328,0,37	1/1:12,13:26:29.79:532,30,0	1/1:4,5:9:21.04:244,21,0	1/1:6,2:9:14.81:144,15,0
chr10	11508692	.	CAG	C	2388.17	PASS	AB=0.981;AC=27;AF=0.500;AN=54;BaseQRankSum=6.099;DP=826;FS=36.495;HRun=0;HaplotypeScore=260.7717;InbreedingCoeff=-0.5612;MQ=47.92;MQ0=29;MQRankSum=-4.909;QD=3.47;ReadPosRankSum=8.497;VQSLOD=1.2363;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:47,0:46:99:212,0,161	0/1:8,0:8:11.97:12,0,70	0/1:63,0:10:7.60:8,0,115	0/1:70,0:17:18.85:19,0,191	0/1:19,1:20:78.27:78,0,80	1/1:3,0:3:2.92:17,3,0	./.	0/0:75,0:59:99:0,110,1884	0/1:16,0:16:27.75:113,0,28	0/1:42,2:42:99:262,0,178	0/1:14,0:13:41.75:42,0,74	0/1:25,1:25:99:163,0,178	0/1:23,1:24:99:199,0,163	0/1:29,1:29:13.99:269,0,14	1/1:14,0:13:22.46:119,22,0	0/1:16,0:15:19.90:69,0,20	0/1:25,0:24:97.60:98,0,122	0/1:17,2:19:58.33:148,0,58	0/0:42,0:34:79.13:0,79,605	0/0:18,0:16:16.19:0,16,158	0/1:94,0:85:87.68:88,0,548	0/1:27,2:27:48.18:48,0,463	0/1:19,0:18:55.25:55,0,133	0/1:32,0:31:39.51:40,0,88	0/1:27,0:27:87.17:87,0,143	0/1:30,0:27:90.68:222,0,91	1/1:7,0:7:19.45:120,19,0	0/1:7,0:7:14.66:61,0,15
chr10	11508696	.	CAT	C	258.96	PASS	AB=0.922;AC=11;AF=0.204;AN=54;BaseQRankSum=7.524;DP=812;FS=25.586;HRun=0;HaplotypeScore=260.4722;InbreedingCoeff=-0.1426;MQ=49.23;MQ0=29;MQRankSum=-6.900;QD=0.98;ReadPosRankSum=-2.113;VQSLOD=0.9250;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,3:46:2.47:0,2,788	0/0:8,0:8:14.95:0,15,230	0/0:64,0:8:0.28:0,0,145	0/0:64,0:20:6.62:0,7,178	0/1:20,0:20:12.52:13,0,356	1/1:3,0:3:2.92:17,3,0	./.	0/0:77,0:61:70.60:0,71,2577	0/1:14,2:16:22.80:23,0,265	0/0:45,1:44:2.67:0,3,1131	0/0:13,0:12:24.06:0,24,382	0/0:24,1:24:50.12:0,50,534	0/0:22,0:22:19.02:0,19,398	0/1:30,0:29:8.43:8,0,378	0/0:14,0:13:10.91:0,11,161	0/0:16,0:15:35.71:0,36,425	0/1:23,2:24:27.23:27,0,467	0/1:17,1:18:42.09:42,0,440	0/0:44,0:34:57.01:0,57,1221	0/0:17,1:16:17.99:0,18,310	0/1:69,20:79:99:205,0,750	0/0:31,0:29:57.53:0,58,864	0/0:17,0:16:32.70:0,33,464	0/1:27,4:31:30.63:31,0,276	0/0:26,0:26:53.47:0,53,728	0/1:25,1:23:11.68:12,0,619	0/0:6,0:6:15.67:0,16,123	0/1:6,1:7:19.64:20,0,153
chr10	11508725	.	C	CCA	13236.35	PASS	AB=0.771;AC=49;AF=0.875;AN=56;BaseQRankSum=-3.269;DP=698;FS=0.678;HRun=0;HaplotypeScore=191.3748;InbreedingCoeff=0.1489;MQ=55.73;MQ0=22;MQRankSum=-2.416;QD=20.84;ReadPosRankSum=1.766;VQSLOD=5.2246;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,23:32:72.21:1173,72,0	1/1:1,5:6:15.05:251,15,0	0/0:62,1:24:35.90:0,36,515	0/1:62,0:24:17.48:17,0,254	0/1:5,11:16:13.94:327,0,14	1/1:5,0:5:14.95:118,15,0	1/1:9,0:12:26.95:223,27,0	1/1:15,35:44:84.19:1253,84,0	1/1:8,8:16:30.06:464,30,0	1/1:21,14:31:56.75:832,57,0	1/1:3,4:6:9.03:147,9,0	1/1:17,9:25:30.02:421,30,0	1/1:6,14:20:30.10:501,30,0	1/1:16,11:27:36.07:543,36,0	1/1:6,11:16:27.09:445,27,0	1/1:11,11:22:45.10:690,45,0	0/1:13,13:27:23.73:614,0,24	1/1:10,9:19:33.57:518,34,0	0/1:15,4:12:54:188,0,54	1/1:4,10:13:24.08:388,24,0	1/1:32,39:58:62.90:1041,63,0	1/1:11,14:24:53.38:833,53,0	0/1:7,2:9:25.76:137,0,26	1/1:16,17:33:39.21:666,39,0	1/1:13,11:24:3.94:595,4,0	1/1:12,10:20:36.08:550,36,0	1/1:2,5:7:9.02:150,9,0	1/1:3,3:6:9.03:151,9,0
chr10	11508730	.	C	CACATAT	1005.79	PASS	AB=1.000;AC=10;AF=0.179;AN=56;BaseQRankSum=5.288;DP=703;FS=24.838;HRun=0;HaplotypeScore=281.1006;InbreedingCoeff=0.2148;MQ=56.40;MQ0=27;MQRankSum=-4.988;QD=4.98;ReadPosRankSum=0.683;VQSLOD=1.0324;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:31:65.82:0,66,291	0/0:7,0:7:12.98:0,13,48	0/1:58,0:23:13.85:14,0,961	0/0:66,0:25:42.20:0,42,700	0/0:18,0:17:21.57:0,22,139	1/1:5,4:8:4.30:431,4,0	1/1:9,5:14:5.91:498,6,0	0/0:54,0:45:41.39:0,41,436	0/0:17,0:16:27.59:0,28,142	0/1:35,0:30:10.03:10,0,217	0/0:8,0:7:14:0,14,107	0/0:25,0:24:24.66:0,25,158	0/0:23,0:22:37.90:0,38,228	0/0:27,0:27:24.18:0,24,138	0/0:17,0:15:25.11:0,25,100	0/0:21,0:21:41.81:0,42,192	0/1:26,0:26:99:125,0,219	0/1:20,0:20:3.02:3,0,177	0/0:15,0:10:20.16:0,20,175	0/0:18,0:17:23.93:0,24,116	0/0:68,0:58:64.72:0,65,359	0/0:28,0:26:51.28:0,51,309	0/0:7,0:7:13.79:0,14,147	0/1:33,0:33:56.02:56,0,117	0/0:22,0:22:37.39:0,37,233	0/0:22,0:20:43.35:0,43,220	0/0:6,0:6:8.26:0,8,30	0/1:7,0:7:1.96:2,0,49
chr10	11508732	.	C	CACACAT	1866.42	PASS	AB=0.972;AC=19;AF=0.339;AN=56;BaseQRankSum=4.160;DP=702;FS=17.575;HRun=0;HaplotypeScore=274.0646;InbreedingCoeff=-0.1832;MQ=56.38;MQ0=24;MQRankSum=-3.631;QD=4.76;ReadPosRankSum=-4.537;VQSLOD=0.3935;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:30:25.56:0,26,155	0/0:7,0:7:10.51:0,11,31	0/0:57,0:25:11.77:0,12,926	0/0:63,0:25:13.07:0,13,478	0/0:19,0:17:18.93:0,19,96	1/1:9,0:8:11.06:243,11,0	1/1:13,1:14:29.69:408,30,0	0/1:53,0:45:99:152,0,169	0/1:17,0:16:7.20:7,0,30	0/1:35,1:31:60.57:216,0,61	0/0:8,0:7:9.47:0,9,45	0/1:26,0:25:31.19:31,0,86	0/0:22,0:21:28.15:0,28,110	0/1:24,0:24:29.71:46,0,30	0/1:16,0:14:15.48:15,0,25	0/1:20,0:20:7.61:8,0,77	0/1:22,4:26:99:338,0,159	0/1:19,1:20:67.42:112,0,67	0/1:15,0:9:3.71:4,0,150	0/0:20,0:19:27.57:0,28,161	0/0:66,3:59:35.96:0,36,219	0/1:29,0:27:25.89:26,0,115	0/0:7,0:7:8.82:0,9,39	0/1:25,9:34:49.82:314,0,50	0/1:24,0:24:21.60:22,0,144	0/1:21,0:18:40.12:44,0,40	0/0:6,0:6:6.47:0,6,19	0/1:8,0:8:7.43:47,0,7
chr10	11508735	.	A	ACC	6398.92	PASS	AB=0.992;AC=38;AF=0.679;AN=56;BaseQRankSum=2.006;DP=693;FS=1.387;HRun=2;HaplotypeScore=217.8431;InbreedingCoeff=-0.1733;MQ=56.38;MQ0=21;MQRankSum=-1.523;QD=11.05;ReadPosRankSum=10.122;VQSLOD=0.7694;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:31,0:30:6.66:612,7,0	1/1:7,0:7:15.01:143,15,0	0/0:53,0:26:55.44:0,55,666	0/0:60,0:25:32.06:0,32,402	0/1:21,0:19:41.14:166,0,41	1/1:11,0:10:8.60:26,9,0	1/1:14,0:14:13.71:42,14,0	0/1:52,0:45:99:436,0,157	1/1:18,0:17:29.09:291,29,0	0/1:32,0:29:43.77:338,0,44	0/1:9,0:8:13.95:67,0,14	0/1:24,1:24:64.37:180,0,64	1/1:23,0:22:12.01:299,12,0	1/1:19,1:20:40.45:386,40,0	1/1:16,0:14:26.96:247,27,0	1/1:19,1:20:10.88:360,11,0	0/1:24,1:25:68.08:345,0,68	0/1:17,0:17:46.59:241,0,47	0/1:14,0:8:93.49:93,0,105	0/1:20,0:19:83.16:165,0,83	0/1:71,0:61:99:434,0,106	0/1:29,1:28:8.31:399,0,8	0/1:9,0:8:31.91:69,0,32	1/1:31,1:32:17.73:373,18,0	0/1:24,0:23:67.97:290,0,68	0/1:24,0:20:19.71:219,0,20	1/1:5,0:5:9.02:94,9,0	1/1:8,0:8:9.42:84,9,0
chr10	11508756	.	CACACACACAG	C	463.36	PASS	AB=1.000;AC=6;AF=0.107;AN=56;BaseQRankSum=6.076;DP=908;FS=30.165;HRun=0;HaplotypeScore=358.6866;InbreedingCoeff=0.2429;MQ=50.44;MQ0=33;MQRankSum=-4.626;QD=4.41;ReadPosRankSum=-3.735;VQSLOD=0.8418;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:41:81.13:0,81,2559	0/0:15,0:15:26.94:0,27,961	0/0:66,0:21:50.39:0,50,878	0/0:65,0:21:16.65:0,17,336	0/0:24,0:22:31.61:0,32,738	1/1:8,5:12:9.49:324,9,0	0/1:12,0:12:18.35:20,0,18	0/0:69,0:55:99:0,126,4675	0/0:18,0:17:39.13:0,39,1543	0/0:41,0:35:81.23:0,81,2986	0/0:16,0:15:23.99:0,24,845	0/0:35,0:35:87.23:0,87,3894	0/0:27,0:25:66.21:0,66,2746	0/0:28,0:28:40.26:0,40,2672	0/0:21,0:19:39.13:0,39,1415	0/0:22,0:22:51.10:0,51,1731	0/1:27,0:27:99:124,0,1800	0/1:21,0:21:1.46:1,0,2238	0/0:28,0:17:39.13:0,39,1576	0/0:37,0:35:84.21:0,84,3241	0/0:106,0:97:99:0,121,4769	0/0:39,0:37:74.68:0,75,3017	0/0:12,0:10:17.72:0,18,778	0/1:32,0:32:99:111,0,2067	0/0:44,0:41:99:0,99,4131	0/0:32,0:27:66.18:0,66,2202	0/0:8,0:8:7.74:0,8,408	0/0:8,0:8:15.05:0,15,637
chr10	11508760	.	CACACAG	C	690.20	PASS	AB=0.941;AC=6;AF=0.107;AN=56;BaseQRankSum=6.546;DP=962;FS=61.298;HRun=0;HaplotypeScore=331.8270;InbreedingCoeff=0.3142;MQ=49.64;MQ0=36;MQRankSum=-5.193;QD=4.37;ReadPosRankSum=-5.259;VQSLOD=-0.5166;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:44:80.85:0,81,1678	0/0:15,0:15:27.33:0,27,619	0/0:67,0:20:25.96:0,26,548	0/1:68,0:20:20.60:21,0,170	0/0:26,0:24:16.84:0,17,487	1/1:11,3:13:24.72:364,25,0	0/1:9,4:13:2.39:191,0,2	0/0:73,0:58:99:0,135,3374	0/0:20,0:19:41.91:0,42,1086	0/0:47,0:39:79.88:0,80,1991	0/0:18,0:17:4.06:0,4,585	0/0:37,0:37:90.22:0,90,2681	0/0:29,0:27:69.02:0,69,1881	0/0:30,0:30:39.99:0,40,1831	0/0:21,0:19:41.72:0,42,1025	0/0:22,0:22:25.92:0,26,1149	0/1:29,0:29:99:112,0,1268	0/0:20,0:20:40.24:0,40,1581	0/0:32,0:22:54.02:0,54,1237	0/0:40,0:38:87.21:0,87,2150	0/0:111,0:101:77.66:0,78,3388	0/0:42,0:40:66.74:0,67,2068	0/0:12,0:10:18.05:0,18,601	0/1:34,0:34:99:132,0,1334	0/0:49,0:46:80.87:0,81,2998	0/0:32,0:26:69:0,69,1411	0/0:8,0:8:8:0,8,305	0/0:7,0:7:15.05:0,15,389
chr10	11508792	.	G	GTA	6372.21	PASS	AB=0.784;AC=20;AF=0.357;AN=56;BaseQRankSum=-0.382;DP=903;FS=9.303;HRun=0;HaplotypeScore=290.9233;InbreedingCoeff=-0.2212;MQ=44.91;MQ0=30;MQRankSum=-3.147;QD=11.61;ReadPosRankSum=0.840;VQSLOD=3.1830;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:20,25:44:99:989,0,142	0/1:9,4:13:43.52:160,0,44	0/0:51,0:13:31.52:0,32,445	0/0:59,0:19:37.58:0,38,497	0/1:13,9:23:13.64:208,0,14	0/0:15,0:14:20.93:0,21,156	0/0:10,0:10:20.80:0,21,195	0/1:62,5:58:99:234,0,1464	0/1:12,9:18:17.79:543,0,18	0/1:22,18:34:99:1086,0,127	1/1:7,9:16:13.61:179,14,0	0/0:44,0:44:99:0,120,1494	0/0:28,0:27:71.45:0,71,881	0/0:27,0:27:59.88:0,60,743	0/1:15,9:24:70.82:440,0,71	0/1:14,7:21:99:405,0,129	0/1:17,6:23:99:285,0,130	0/1:12,5:16:2.30:357,0,2	0/1:24,0:20:6.37:6,0,589	0/0:34,4:37:40.67:0,41,1246	0/1:126,3:121:6.95:7,0,2214	0/0:36,0:32:80.51:0,81,1067	0/1:9,4:13:28.16:193,0,28	1/1:14,6:20:3.07:201,3,0	0/0:42,0:40:99:0,106,1546	0/1:24,16:32:99:882,0,111	0/1:4,2:6:27.65:50,0,28	0/1:6,1:7:53.07:146,0,53
chr10	11508794	.	A	AAC	4482.85	PASS	AB=0.990;AC=27;AF=0.482;AN=56;BaseQRankSum=6.730;DP=928;FS=10.337;HRun=0;HaplotypeScore=316.6489;InbreedingCoeff=-0.6196;MQ=44.43;MQ0=30;MQRankSum=-4.404;QD=5.70;ReadPosRankSum=-0.264;VQSLOD=2.8974;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:48,0:47:99:561,0,150	0/1:13,0:14:45.10:111,0,45	0/0:52,0:12:15.90:0,16,224	0/0:64,0:20:32.46:0,32,341	0/1:25,0:26:35.61:134,0,36	1/1:4,11:14:30.84:388,31,0	1/1:10,5:15:27.16:288,27,0	0/1:68,0:59:25.39:25,0,1005	0/1:22,0:19:48.47:353,0,48	0/1:41,0:35:99:678,0,167	0/1:16,0:16:2.89:80,0,3	0/1:42,1:43:55.61:56,0,710	0/1:26,0:25:56.81:57,0,297	0/1:28,0:28:58.99:59,0,319	0/1:25,0:25:99:248,0,113	0/1:20,0:20:99:185,0,121	0/1:24,0:24:99:144,0,273	0/1:17,0:16:22.07:127,0,22	0/0:26,0:20:38.42:0,38,533	0/1:39,0:40:24.19:24,0,669	0/1:128,1:122:99:156,0,1182	0/1:34,0:31:33.81:34,0,508	0/1:15,0:15:40.20:88,0,40	0/1:20,0:20:60.30:90,0,60	0/1:42,1:42:19.24:19,0,789	0/1:40,0:33:99:500,0,183	0/1:6,0:6:28.38:28,0,67	0/1:7,0:7:50.39:50,0,99
chr10	11508806	.	G	GACAC	830	PASS	AB=1.000;AC=6;AF=0.107;AN=56;BaseQRankSum=6.266;DP=900;FS=23.013;HRun=0;HaplotypeScore=360.7410;InbreedingCoeff=0.4957;MQ=50.56;MQ0=10;MQRankSum=-3.800;QD=13.61;ReadPosRankSum=-3.716;VQSLOD=1.8233;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:47:70.77:0,71,757	0/0:12,0:12:12.48:0,12,112	0/0:46,0:18:19.01:0,19,237	0/0:51,0:23:22.85:0,23,394	0/0:31,0:31:3.58:0,4,372	1/1:5,10:14:32.97:640,33,0	1/1:10,4:15:14.64:290,15,0	0/0:69,0:62:96.30:0,96,1364	0/0:20,0:17:28.74:0,29,295	0/0:42,0:38:60.89:0,61,910	0/0:18,0:18:16.65:0,17,175	0/0:43,0:43:48.99:0,49,967	0/0:25,0:25:6.74:0,7,457	0/0:27,0:27:10.88:0,11,558	0/0:26,0:26:22.31:0,22,309	0/1:23,0:23:13.97:14,0,355	0/0:22,0:22:36.05:0,36,410	0/0:15,0:14:20.65:0,21,180	0/0:29,0:24:47.98:0,48,733	0/0:39,0:40:38.76:0,39,878	0/0:123,0:117:9.36:0,9,1884	0/0:33,0:32:51.04:0,51,767	0/0:14,0:14:14.47:0,14,180	0/0:15,0:15:8.88:0,9,96	0/0:42,0:42:43.35:0,43,1057	0/0:41,0:38:73.55:0,74,948	0/0:6,0:6:5.84:0,6,53	0/1:8,0:8:17.78:18,0,119
chr10	11508854	.	C	CACACAG	1250.77	PASS	AB=0.972;AC=22;AF=0.393;AN=56;BaseQRankSum=5.778;DP=679;FS=22.025;HRun=0;HaplotypeScore=250.7862;InbreedingCoeff=-0.3065;MQ=44.43;MQ0=29;MQRankSum=-2.131;QD=2.68;ReadPosRankSum=5.383;VQSLOD=0.9524;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:32,0:34:27.58:28,0,142	1/1:4,0:4:1.82:5,2,0	0/1:71,0:14:8.76:9,0,291	0/0:89,0:22:31.08:0,31,420	0/1:20,0:20:25.13:25,0,39	0/1:16,0:16:6.19:6,0,143	0/0:27,0:25:23.52:0,24,394	0/0:28,0:23:20.58:0,21,159	0/0:13,0:10:5.74:0,6,30	0/1:26,0:23:36.87:37,0,101	0/0:11,0:11:4.59:0,5,17	0/1:21,1:22:73.48:73,0,74	0/1:13,1:14:83.19:90,0,83	0/1:15,0:14:28.25:54,0,28	0/1:15,0:15:41.27:41,0,92	0/1:17,0:18:90.34:108,0,90	0/1:27,1:25:99:154,0,113	0/1:12,1:14:74.85:267,0,75	0/0:17,1:13:22.45:0,22,177	1/1:13,0:13:11.50:101,11,0	0/1:89,2:84:99:203,0,232	0/1:15,0:15:29.17:29,0,59	0/0:8,0:8:1.72:0,2,4	1/1:12,0:12:5.34:25,5,0	0/0:16,0:16:4.60:0,5,65	0/1:28,0:25:47.59:48,0,144	0/0:3,0:3:5.82:0,6,33	0/1:9,0:9:30.53:107,0,31
chr10	11508916	.	AAC	A	922.29	PASS	AB=0.982;AC=7;AF=0.125;AN=56;BaseQRankSum=5.420;DP=685;FS=20.484;HRun=0;HaplotypeScore=146.5833;InbreedingCoeff=0.4761;MQ=52.88;MQ0=6;MQRankSum=-1.643;QD=9.51;ReadPosRankSum=0.185;VQSLOD=1.8938;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:78.25:0,78,1226	0/0:2,0:2:3.01:0,3,48	0/0:38,0:15:5.13:0,5,124	0/0:43,0:23:5.14:0,5,278	0/1:9,0:9:23.52:24,0,133	1/1:6,15:20:39.12:470,39,0	1/1:7,23:29:48.07:550,48,0	0/0:24,0:23:37.94:0,38,567	0/0:15,0:14:36.12:0,36,575	0/0:28,0:28:66.22:0,66,1058	0/0:17,0:17:36.12:0,36,578	0/0:22,0:22:45.13:0,45,695	0/0:14,0:14:39.13:0,39,629	0/0:18,0:17:42.12:0,42,650	0/0:16,0:16:39.13:0,39,628	0/0:11,0:11:24.08:0,24,387	0/0:35,0:33:84.29:0,84,1343	0/1:19,0:19:12.12:12,0,648	0/0:17,0:16:36.10:0,36,553	0/0:15,0:15:15.05:0,15,229	0/0:110,2:108:99:0,104,2117	0/0:18,0:18:39.13:0,39,625	0/0:9,0:9:18.06:0,18,290	0/0:42,0:42:99:0,99,1581	0/1:17,1:18:0.31:0,0,449	0/0:30,1:29:26.64:0,27,888	0/0:7,0:6:15.05:0,15,226	0/0:15,0:15:33.11:0,33,521
chr10	11509015	.	C	CCA	435.95	PASS	AB=0.970;AC=17;AF=0.327;AN=52;BaseQRankSum=0.980;DP=654;FS=4.922;HRun=0;HaplotypeScore=116.6028;InbreedingCoeff=0.4351;MQ=53.39;MQ0=29;MQRankSum=0.210;QD=2.02;ReadPosRankSum=-1.049;VQSLOD=1.9661;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:31:2.79:0,3,14	0/0:6,0:6:4.54:0,5,27	./.	./.	0/0:13,0:13:8.99:0,9,82	0/0:18,0:15:11.89:0,12,118	0/0:36,0:36:29.54:0,30,254	1/1:23,0:20:5.84:42,6,0	0/0:16,0:15:8.51:0,9,97	0/0:21,0:16:3:0,3,28	0/0:9,0:8:3:0,3,33	1/1:5,11:15:9.03:134,9,0	0/1:17,0:16:3.46:3,0,12	1/1:11,3:15:3.01:45,3,0	0/0:16,0:14:0.26:0,0,50	0/0:11,0:11:8.89:0,9,98	0/1:25,1:26:3.14:3,0,338	0/0:20,0:19:17.98:0,18,167	1/1:13,0:11:12.85:138,13,0	1/1:11,0:12:3.01:41,3,0	1/1:55,0:53:8.94:79,9,0	0/1:16,1:16:53.23:53,0,74	0/0:11,0:10:4.66:0,5,19	0/0:48,0:49:44.14:0,44,411	1/1:11,1:19:6:52,6,0	0/0:33,0:30:6.42:0,6,54	0/0:5,0:5:12.01:0,12,122	0/0:5,0:5:2.84:0,3,14
chr10	11509129	.	TC	T	706.85	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-6.131;DP=684;FS=5.351;HRun=4;HaplotypeScore=118.2513;InbreedingCoeff=0.9977;MQ=79.73;MQ0=0;MQRankSum=-0.972;QD=24.37;ReadPosRankSum=0.370;VQSLOD=2.2426;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:44:99:0,123,1704	0/0:9,0:9:24.08:0,24,335	0/0:23,0:23:63.12:0,63,832	0/0:28,0:28:63.08:0,63,804	0/0:23,0:23:57.19:0,57,794	1/1:0,13:13:24.07:288,24,0	1/1:0,16:16:45.14:540,45,0	0/0:27,0:27:78.25:0,78,1063	0/0:20,0:20:57.16:0,57,777	0/0:27,0:27:72.24:0,72,1007	0/0:16,0:16:48.16:0,48,671	0/0:20,0:20:57.19:0,57,798	0/0:32,0:32:96.31:0,96,1326	0/0:20,0:20:60.20:0,60,840	0/0:20,0:20:57.19:0,57,798	0/0:12,0:12:33.11:0,33,462	0/0:25,0:25:72.24:0,72,1005	0/0:23,0:23:60.20:0,60,835	0/0:25,0:25:66.21:0,66,906	0/0:35,0:35:99:0,99,1368	0/0:43,0:43:99:0,114,1578	0/0:22,0:22:63.21:0,63,880	0/0:15,0:15:42.14:0,42,586	0/0:38,0:38:99:0,105,1450	0/0:30,0:30:90.26:0,90,1233	0/0:32,0:32:90.30:0,90,1252	0/0:24,0:23:66.21:0,66,909	0/0:21,0:21:57.15:0,57,776
chr10	11510477	.	CA	C	123.17	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.489;DP=654;FS=0.000;HRun=1;HaplotypeScore=109.2628;InbreedingCoeff=0.9727;MQ=57.68;MQ0=11;MQRankSum=-4.880;QD=7.25;ReadPosRankSum=3.226;VQSLOD=0.8452;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:47.94:0,48,567	0/0:13,0:13:33.10:0,33,424	0/0:36,0:23:60.19:0,60,762	0/0:32,0:18:48.15:0,48,619	0/0:18,0:18:25.81:0,26,307	1/1:0,12:11:31.85:172,32,0	1/1:2,3:4:11.64:68,12,0	0/0:20,0:20:60.19:0,60,793	0/0:25,0:25:65.21:0,65,761	0/0:20,0:20:59.22:0,59,797	0/0:15,0:15:38.97:0,39,553	0/0:26,0:26:54.14:0,54,641	0/0:19,0:19:54.08:0,54,658	0/0:23,0:23:42.09:0,42,483	0/0:19,0:19:51.04:0,51,627	0/0:24,0:24:66.15:0,66,748	0/0:28,0:28:72.15:0,72,838	0/0:32,0:31:81.67:0,82,943	0/0:18,0:18:48.11:0,48,622	0/0:17,0:17:29.11:0,29,321	0/0:39,0:39:68.22:0,68,786	0/0:25,0:25:40.97:0,41,512	0/0:17,0:17:33.10:0,33,450	0/0:57,0:57:99:0,126,1559	0/0:16,0:15:33.50:0,33,342	0/0:28,0:27:78.22:0,78,975	0/0:19,0:18:51.02:0,51,600	0/0:6,0:6:15.04:0,15,180
chr10	11510479	.	CACACACACACACACACACACACA	C	2248.79	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=4.818;DP=658;FS=0.000;HRun=0;HaplotypeScore=335.0088;InbreedingCoeff=0.9599;MQ=55.92;MQ0=12;MQRankSum=-5.038;QD=140.55;ReadPosRankSum=2.285;VQSLOD=2.7800;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:45:44.51:0,45,3149	0/0:12,0:12:33.10:0,33,2642	0/0:38,0:21:60.19:0,60,2732	0/0:31,0:17:48.16:0,48,2054	0/0:18,0:18:27.22:0,27,1510	1/1:1,11:11:33.11:1857,33,0	1/1:1,3:3:9.03:506,9,0	0/0:21,0:21:63.21:0,63,4074	0/0:25,0:25:66.23:0,66,5302	0/0:20,0:20:60.21:0,60,5056	0/0:15,0:15:38.12:0,38,3080	0/0:26,0:26:54.15:0,54,4368	0/0:19,0:19:54.11:0,54,4411	0/0:24,0:24:45.15:0,45,4065	0/0:19,0:19:51.10:0,51,4187	0/0:24,0:24:66.23:0,66,6030	0/0:28,0:28:72.22:0,72,5870	0/0:32,0:31:83.08:0,83,6726	0/0:19,0:19:54.19:0,54,4165	0/0:17,0:17:30.07:0,30,2107	0/0:38,0:38:75.21:0,75,4672	0/0:26,0:26:44.30:0,44,3622	0/0:17,0:17:32.18:0,32,2985	0/0:58,0:58:99:0,127,10106	0/0:16,0:15:39.13:0,39,3071	0/0:28,0:27:78.26:0,78,6150	0/0:19,0:18:51.16:0,51,4261	0/0:6,0:6:15.05:0,15,1045
chr10	11512614	.	GCGCGCA	G	3980.19	PASS	AB=0.912;AC=35;AF=0.625;AN=56;BaseQRankSum=1.225;DP=447;FS=3.851;HRun=0;HaplotypeScore=148.3371;InbreedingCoeff=0.4830;MQ=58.27;MQ0=4;MQRankSum=-5.355;QD=11.71;ReadPosRankSum=1.120;VQSLOD=2.9980;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:18,4:22:11.57:79,12,0	1/1:6,1:7:21.04:320,21,0	0/0:7,0:5:9.50:0,10,222	0/1:23,0:9:16.84:17,0,43	0/1:14,3:17:14.32:173,0,14	1/1:14,1:15:9.02:94,9,0	1/1:9,1:10:9.02:114,9,0	0/1:17,0:16:57.54:58,0,141	1/1:8,3:11:11.99:147,12,0	1/1:17,2:18:42.56:557,43,0	1/1:13,3:16:5.88:54,6,0	0/1:21,0:21:31.51:32,0,187	0/0:14,0:14:16.37:0,16,170	0/0:15,0:15:12.48:0,12,112	1/1:14,3:17:8.62:89,9,0	1/1:12,1:12:9.01:84,9,0	1/1:20,1:21:23.98:224,24,0	1/1:23,4:27:35.83:544,36,0	0/0:14,0:14:26.64:0,27,426	0/0:8,0:7:3.01:0,3,45	0/0:9,0:9:3.01:0,3,30	0/0:24,0:24:36.40:0,36,644	1/1:10,5:15:15.03:169,15,0	1/1:5,20:25:0.71:1,1,0	0/0:16,0:16:16.59:0,17,156	1/1:5,12:17:41.96:713,42,0	1/1:16,7:23:33.09:495,33,0	0/1:2,1:3:11.69:18,0,12
chr10	11512616	.	GCGCA	G	4707.85	PASS	AB=0.993;AC=40;AF=0.714;AN=56;BaseQRankSum=-0.714;DP=430;FS=4.343;HRun=0;HaplotypeScore=131.6113;InbreedingCoeff=0.1505;MQ=56.19;MQ0=5;MQRankSum=-4.200;QD=12.04;ReadPosRankSum=0.980;VQSLOD=4.2651;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:21:8.93:67,9,0	1/1:2,5:7:18.06:306,18,0	0/0:7,0:5:12.50:0,13,208	0/1:22,0:8:9.75:10,0,14	0/1:16,0:17:7.33:108,0,7	1/1:7,8:15:9.03:174,9,0	1/1:5,6:11:9.03:150,9,0	0/1:18,0:17:44.94:62,0,45	1/1:4,7:11:9.01:129,9,0	1/1:2,14:15:42.12:744,42,0	1/1:4,9:13:2.89:58,3,0	0/1:19,0:19:41.88:42,0,44	0/1:14,0:14:23.33:43,0,23	0/0:15,0:15:3.58:0,4,8	1/1:3,12:15:8.76:173,9,0	1/1:2,11:12:6.02:115,6,0	1/1:3,15:18:15.05:288,15,0	1/1:5,19:24:32.97:586,33,0	0/1:15,0:15:5.75:6,0,183	0/0:8,0:7:3:0,3,25	0/0:9,0:8:1.82:0,2,5	0/1:23,0:23:74.01:74,0,258	1/1:7,7:14:15.05:261,15,0	1/1:22,2:24:0.18:1,0,0	0/1:17,0:17:7.71:35,0,8	1/1:12,4:16:41.97:601,42,0	1/1:7,15:22:33.11:588,33,0	1/1:5,0:5:11.92:88,12,0
chr10	11512619	.	CACGTGTGT	C	584.12	PASS	AB=0.988;AC=17;AF=0.304;AN=56;BaseQRankSum=-5.711;DP=411;FS=13.702;HRun=0;HaplotypeScore=154.0395;InbreedingCoeff=-0.1575;MQ=54.64;MQ0=6;MQRankSum=0.273;QD=2.49;ReadPosRankSum=-4.215;VQSLOD=0.6146;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:8.82:0,9,157	0/1:6,0:6:44.60:45,0,89	0/0:9,0:6:17.08:0,17,370	0/1:21,0:7:0.42:0,0,54	0/1:16,0:16:31.39:31,0,275	0/0:15,0:15:8.97:0,9,92	0/1:12,0:12:9.23:9,0,53	1/1:5,10:14:16.09:137,16,0	0/1:10,0:10:17.42:17,0,93	0/1:16,0:15:41.90:42,0,347	0/0:12,0:12:2.84:0,3,31	0/1:14,0:16:13.43:13,0,197	0/0:12,0:13:14.32:0,14,214	0/0:11,0:12:6.49:0,6,108	0/0:15,0:15:9.02:0,9,97	0/0:12,0:11:6.02:0,6,65	0/0:16,0:16:15.04:0,15,162	0/1:23,0:23:12.89:13,0,223	0/1:14,0:14:28.89:29,0,150	0/0:6,1:6:0:0,0,0	1/1:10,0:8:2.97:20,3,0	0/1:22,0:22:99:179,0,762	0/1:14,0:14:37.19:37,0,110	0/0:24,0:24:0.24:0,0,1	0/0:15,0:16:17.65:0,18,277	0/1:16,0:16:99:100,0,250	0/1:22,0:22:62.56:63,0,205	0/0:5,0:5:12.04:0,12,220
chr10	11512997	.	TAATA	T	5336.36	PASS	AC=42;AF=0.955;AN=44;BaseQRankSum=1.672;DP=248;FS=0.000;HRun=0;HaplotypeScore=40.6648;InbreedingCoeff=0.2869;MQ=71.98;MQ0=0;MQRankSum=1.702;QD=24.04;ReadPosRankSum=1.491;VQSLOD=4.2629;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,11:15:27.09:446,27,0	./.	./.	0/0:8,0:7:3.01:0,3,62	1/1:4,3:7:9.03:136,9,0	1/1:5,7:12:18.06:297,18,0	1/1:3,0:3:2.99:24,3,0	1/1:12,18:30:54.15:751,54,0	1/1:3,4:7:9.03:149,9,0	1/1:5,3:8:9.03:136,9,0	1/1:4,1:5:3.01:50,3,0	1/1:3,5:8:12.04:198,12,0	1/1:4,5:9:12.04:198,12,0	1/1:3,4:7:12.04:198,12,0	1/1:2,6:8:6.02:99,6,0	./.	1/1:5,15:20:27.09:446,27,0	1/1:3,10:13:24.08:396,24,0	1/1:2,10:12:27.07:354,27,0	./.	1/1:5,2:7:9.03:136,9,0	./.	./.	1/1:4,3:7:6.02:99,6,0	1/1:5,4:9:12.04:198,12,0	1/1:7,0:7:3.01:37,3,0	1/1:3,6:8:12.04:197,12,0	1/1:0,19:19:48.16:792,48,0
chr10	11513735	.	GA	G	15740.51	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=5.774;DP=516;FS=13.272;HRun=1;HaplotypeScore=211.3776;InbreedingCoeff=0.9994;MQ=74.47;MQ0=0;MQRankSum=-7.636;QD=39.75;ReadPosRankSum=2.059;VQSLOD=1.6156;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,16:16:45.11:605,45,0	1/1:0,9:9:27.09:377,27,0	0/0:18,0:18:51.17:0,51,808	0/0:15,0:15:35.76:0,36,506	1/1:1,22:23:63.21:867,63,0	1/1:2,22:24:72.23:990,72,0	1/1:0,10:10:30.10:419,30,0	1/1:0,23:23:66.19:895,66,0	1/1:1,22:23:69.19:939,69,0	1/1:0,30:30:90.30:1258,90,0	1/1:0,13:13:39.13:544,39,0	0/0:17,0:17:48.16:0,48,766	0/0:13,0:13:30.10:0,30,479	0/0:24,0:24:66.23:0,66,1053	1/1:0,29:29:84.28:1173,84,0	1/1:0,23:23:69.23:963,69,0	1/1:1,12:13:36.12:502,36,0	1/1:0,11:11:33.07:439,33,0	1/1:2,12:14:36.11:488,36,0	1/1:0,28:28:81.27:1123,81,0	1/1:0,18:18:45.15:620,45,0	0/0:14,0:14:39.13:0,39,621	1/1:0,13:13:36.12:502,36,0	1/1:0,17:17:42.11:586,42,0	0/0:19,0:19:45.15:0,45,717	1/1:1,30:31:93.30:1278,93,0	1/1:0,16:16:48.16:669,48,0	1/1:0,12:12:36.12:503,36,0
chr10	11513765	.	A	ACCTG	30836.68	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=7.507;DP=586;FS=0.000;HRun=0;HaplotypeScore=231.8143;InbreedingCoeff=0.9853;MQ=72.33;MQ0=0;MQRankSum=-9.945;QD=56.69;ReadPosRankSum=5.351;VQSLOD=5.0134;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,11:20:39.13:981,39,0	1/1:3,9:12:27.09:710,27,0	0/0:18,0:18:45.15:0,45,819	0/0:24,0:24:62.21:0,62,1032	1/1:7,18:26:48.16:1255,48,0	1/1:5,20:25:69.24:1779,69,0	1/1:8,7:14:21.07:545,21,0	1/1:14,13:27:48.10:1059,48,0	1/1:9,23:32:87.29:2186,87,0	1/1:9,26:35:87.23:2191,87,0	1/1:3,16:19:54.18:1325,54,0	1/1:2,17:19:51.18:1341,51,0	1/1:2,12:14:33.11:868,33,0	1/1:6,22:29:75.26:1893,75,0	1/1:7,20:27:63.22:1621,63,0	1/1:9,15:24:54.18:1334,54,0	1/1:6,12:18:30.10:790,30,0	1/1:5,5:10:18.06:474,18,0	1/1:7,9:17:30.57:773,31,0	1/1:9,20:29:69.24:1806,69,0	1/1:12,5:17:18.06:427,18,0	1/1:1,10:11:21.07:552,21,0	1/1:7,12:19:36.12:909,36,0	1/1:8,12:20:35.14:867,35,0	1/1:2,17:21:48.16:1252,48,0	1/1:4,25:29:78.27:2049,78,0	1/1:6,14:19:48.16:1257,48,0	1/1:2,7:9:24.08:594,24,0
chr10	11515522	.	A	ATCTGTCTGTCTGTCTG	23033.46	PASS	AB=1.000;AC=53;AF=0.946;AN=56;BaseQRankSum=0.446;DP=539;FS=0.000;HRun=0;HaplotypeScore=258.8881;InbreedingCoeff=0.5088;MQ=56.67;MQ0=5;MQRankSum=-5.316;QD=44.38;ReadPosRankSum=3.164;VQSLOD=3.9662;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:38,3:41:42.02:1504,42,0	1/1:10,1:11:21.05:980,21,0	0/1:26,0:20:3.32:3,0,230	0/0:20,0:18:20.57:0,21,649	1/1:9,1:10:9.03:364,9,0	1/1:19,0:19:9.03:414,9,0	1/1:20,0:20:14.70:369,15,0	1/1:36,0:34:50.01:1432,50,0	1/1:9,2:11:12.04:780,12,0	1/1:18,2:19:45.14:1832,45,0	1/1:10,8:18:30.10:2141,30,0	1/1:14,0:14:6.02:269,6,0	1/1:15,0:15:8.95:224,9,0	1/1:17,0:17:5.91:199,6,0	1/1:17,3:19:15.03:807,15,0	1/1:19,3:22:24.01:1295,24,0	1/1:25,2:26:32.97:1013,33,0	1/1:18,3:21:26.94:1093,27,0	1/1:20,0:24:42.14:1198,42,0	1/1:18,0:23:30.02:1039,30,0	1/1:18,0:19:18.02:339,18,0	1/1:5,0:5:3.01:181,3,0	1/1:12,1:13:12.04:691,12,0	1/1:17,0:17:15.04:495,15,0	1/1:8,0:8:8.96:219,9,0	1/1:21,5:26:57.19:2336,57,0	1/1:19,3:22:26.98:1478,27,0	1/1:11,0:11:18.01:335,18,0
chr10	11515571	.	C	CT	413.79	PASS	AB=0.896;AC=6;AF=0.107;AN=56;BaseQRankSum=0.964;DP=444;FS=10.604;HRun=2;HaplotypeScore=134.6869;InbreedingCoeff=0.5506;MQ=64.93;MQ0=0;MQRankSum=-0.442;QD=7.26;ReadPosRankSum=-2.545;VQSLOD=-0.6242;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:84.24:0,84,975	0/0:11,0:11:33.10:0,33,387	0/0:18,0:14:1.20:0,1,192	0/1:12,0:10:8.20:8,0,56	0/0:13,0:13:36.11:0,36,433	1/1:3,14:17:25.17:334,25,0	1/1:5,3:8:11.98:114,12,0	0/0:30,0:30:58.66:0,59,862	0/0:11,0:11:27.07:0,27,310	0/0:18,0:18:54.16:0,54,644	0/0:18,0:18:45.13:0,45,520	0/0:13,0:13:18.53:0,19,130	0/0:9,0:9:17.39:0,17,112	0/0:8,0:8:13.64:0,14,76	0/0:12,0:11:30.09:0,30,355	0/0:20,0:20:60.16:0,60,692	0/0:19,0:18:54.16:0,54,628	0/0:16,0:16:45.12:0,45,526	0/0:15,0:15:39.10:0,39,452	0/0:27,0:27:72.22:0,72,851	0/0:12,0:12:33.10:0,33,396	0/0:10,0:10:21.76:0,22,117	0/0:13,0:13:39.12:0,39,462	0/0:14,0:14:30.09:0,30,353	0/1:16,3:19:87.31:87,0,139	0/0:22,0:22:66.20:0,66,785	0/0:25,0:25:72.20:0,72,831	0/0:3,0:3:9.03:0,9,107
chr10	11515574	.	CT	C	6910.87	PASS	AB=0.804;AC=39;AF=0.696;AN=56;BaseQRankSum=-9.206;DP=445;FS=0.548;HRun=10;HaplotypeScore=105.0048;InbreedingCoeff=0.7593;MQ=64.30;MQ0=0;MQRankSum=0.726;QD=18.93;ReadPosRankSum=2.428;VQSLOD=4.9200;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,24:31:62.06:570,62,0	1/1:2,9:11:26.98:234,27,0	0/1:15,2:13:36.59:37,0,70	0/1:12,0:9:12.38:12,0,21	1/1:3,12:15:35.97:308,36,0	0/0:16,0:16:33.82:0,34,189	0/0:7,0:7:15.34:0,15,84	1/1:7,22:29:49.11:552,49,0	1/1:1,9:10:26.99:234,27,0	1/1:2,16:18:47.99:417,48,0	1/1:6,12:18:16.18:263,16,0	0/0:12,0:12:24.06:0,24,263	0/0:9,0:9:21.02:0,21,218	0/0:7,0:7:9.38:0,9,128	1/1:1,10:10:23.99:208,24,0	1/1:3,18:21:53.97:469,54,0	1/1:5,15:20:47:396,47,0	1/1:3,14:17:44.95:384,45,0	1/1:1,13:14:38.99:338,39,0	1/1:4,22:26:62.98:546,63,0	0/1:1,13:14:0.16:227,0,0	0/0:10,0:10:9.25:0,9,201	1/1:1,12:13:32.99:286,33,0	1/1:1,11:13:29.03:240,29,0	0/0:19,0:19:42.86:0,43,408	1/1:2,21:23:59.97:521,60,0	1/1:3,23:26:65.97:573,66,0	1/1:3,2:5:11.94:93,12,0
chr10	11515659	.	TA	T	7268.92	PASS	AB=1.000;AC=41;AF=0.732;AN=56;BaseQRankSum=-11.248;DP=451;FS=3.319;HRun=10;HaplotypeScore=61.0895;InbreedingCoeff=0.6742;MQ=62.76;MQ0=4;MQRankSum=1.199;QD=18.88;ReadPosRankSum=0.911;VQSLOD=5.8279;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,32:37:67.20:708,67,0	1/1:1,5:6:15:130,15,0	0/0:24,0:7:14.22:0,14,83	0/1:10,0:8:0.87:1,0,57	1/1:3,24:27:68.74:572,69,0	0/0:20,0:20:34.08:0,34,144	0/0:9,0:8:15.82:0,16,73	1/1:5,24:27:68.87:577,69,0	1/1:2,13:15:41.98:361,42,0	1/1:9,13:22:56.95:486,57,0	1/1:1,23:24:68.93:591,69,0	0/1:9,0:9:17.47:17,0,41	0/0:6,0:6:16.01:0,16,74	0/0:3,0:3:5.87:0,6,36	1/1:3,2:5:8.98:74,9,0	1/1:1,16:17:50.97:437,51,0	1/1:6,15:21:56.79:466,57,0	1/1:6,24:30:56.94:487,57,0	1/1:9,8:16:38.90:321,39,0	1/1:7,10:17:38.89:326,39,0	1/1:4,6:10:0.27:135,0,0	0/0:4,0:4:7.56:0,8,29	1/1:2,4:6:12:104,12,0	1/1:1,1:2:3:26,3,0	0/1:17,0:17:5.18:5,0,62	1/1:5,24:29:77.93:666,78,0	1/1:6,17:22:59.97:516,60,0	1/1:1,11:12:29.99:260,30,0
chr10	11516532	.	A	AG	326	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=2.135;DP=339;FS=83.881;HRun=0;HaplotypeScore=102.8670;InbreedingCoeff=0.9007;MQ=51.04;MQ0=0;MQRankSum=-5.052;QD=11.24;ReadPosRankSum=0.872;VQSLOD=0.8127;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:41.39:0,41,263	0/0:5,0:5:14.82:0,15,100	0/0:9,0:5:11.97:0,12,126	0/0:24,0:11:27.41:0,27,309	0/0:29,0:29:79.82:0,80,521	1/1:0,7:7:17.65:107,18,0	1/1:0,2:2:5.88:36,6,0	0/0:18,0:18:50.33:0,50,333	0/0:12,0:11:29.61:0,30,210	0/0:12,0:10:20.74:0,21,142	0/0:19,0:19:53.37:0,53,361	1/1:3,4:7:20.73:149,21,0	1/1:0,2:2:5.87:35,6,0	1/1:0,2:2:5.87:35,6,0	0/0:11,0:11:29.56:0,30,187	0/0:9,0:9:23.69:0,24,158	0/0:20,0:20:47.31:0,47,307	0/0:10,0:10:23.74:0,24,163	0/0:11,0:11:23.72:0,24,161	0/0:24,0:23:64.95:0,65,413	0/0:12,0:12:26.66:0,27,176	1/1:1,2:3:5.58:36,6,0	0/0:10,0:10:27.51:0,28,173	0/0:12,0:12:35.69:0,36,261	1/1:0,6:6:17.65:107,18,0	0/0:8,0:7:20.69:0,21,131	0/0:21,0:20:56.14:0,56,355	0/0:16,0:16:47.30:0,47,299
chr10	11516998	.	C	CGT	407.10	PASS	AB=1.000;AC=11;AF=0.262;AN=42;BaseQRankSum=-3.892;DP=366;FS=6.540;HRun=0;HaplotypeScore=138.7342;InbreedingCoeff=0.4828;MQ=62.62;MQ0=4;MQRankSum=0.929;QD=2.68;ReadPosRankSum=-3.503;VQSLOD=0.6946;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:46,0:45:8.49:8,0,120	0/0:5,0:5:2.48:0,2,12	0/0:26,0:20:41.80:0,42,456	0/0:12,0:8:15.76:0,16,207	0/0:11,0:11:4.77:0,5,17	./.	./.	1/1:20,0:20:8.43:72,8,0	0/0:16,0:16:16.47:0,16,73	0/1:10,0:10:12.55:13,0,14	0/0:10,0:10:2.74:0,3,12	./.	./.	./.	0/0:19,0:19:18.74:0,19,85	0/0:15,0:15:16.47:0,16,73	0/0:34,0:34:33.98:0,34,144	0/0:22,0:22:9.44:0,9,47	1/1:27,0:26:13.84:127,14,0	1/1:12,3:15:9.50:133,10,0	1/1:19,3:22:11.98:177,12,0	./.	0/0:11,0:11:19.72:0,20,86	0/0:14,0:14:2.74:0,3,12	./.	0/1:12,0:12:7.52:18,0,8	0/0:6,0:6:8.23:0,8,37	0/0:13,0:13:24.38:0,24,106
chr10	11517005	.	GTGTGTA	G	3467.13	PASS	AB=0.988;AC=31;AF=0.738;AN=42;BaseQRankSum=-1.679;DP=401;FS=1.885;HRun=0;HaplotypeScore=147.3711;InbreedingCoeff=0.0809;MQ=57.61;MQ0=8;MQRankSum=-0.369;QD=9.63;ReadPosRankSum=3.039;VQSLOD=2.8116;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:52,1:52:44.79:585,45,0	1/1:5,0:5:2.74:12,3,0	0/0:25,0:17:44.47:0,44,379	0/0:15,0:8:18.92:0,19,254	1/1:15,1:16:12.87:186,13,0	./.	./.	0/1:22,0:22:99:242,0,296	1/1:17,0:17:16.47:70,16,0	0/1:11,0:11:12.47:219,0,12	1/1:12,1:13:3.47:29,3,0	./.	./.	./.	0/1:19,2:21:6.72:282,0,7	1/1:17,0:17:16.14:70,16,0	1/1:34,0:34:24.94:350,25,0	1/1:21,2:23:34.46:348,34,0	0/1:26,0:24:99:230,0,341	0/1:16,0:16:66.84:67,0,231	0/1:19,0:19:99:169,0,247	./.	1/1:13,2:15:2.38:226,2,0	1/1:14,0:13:2.74:12,3,0	./.	1/1:14,0:14:18.89:225,19,0	1/1:8,0:8:8.43:77,8,0	0/1:16,0:16:0.52:70,0,1
chr10	11517007	.	GTGTA	G	7143.47	PASS	AB=1.000;AC=34;AF=0.810;AN=42;BaseQRankSum=-4.433;DP=401;FS=10.833;HRun=0;HaplotypeScore=115.1114;InbreedingCoeff=0.2774;MQ=55.78;MQ0=9;MQRankSum=0.956;QD=20.01;ReadPosRankSum=1.457;VQSLOD=4.1787;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:40,11:50:99:1290,111,0	1/1:0,5:5:3.01:57,3,0	0/0:26,0:16:44.47:0,44,379	0/0:17,0:8:18.83:0,19,191	1/1:17,1:18:39.34:367,39,0	./.	./.	0/1:22,0:22:99:287,0,134	1/1:0,17:17:18.06:340,18,0	1/1:2,9:11:15.16:303,15,0	1/1:1,11:12:3.46:57,3,0	./.	./.	./.	1/1:13,7:20:46.88:591,47,0	1/1:0,17:17:17.73:340,18,0	1/1:24,10:34:78.39:987,78,0	1/1:19,5:24:50.53:484,51,0	0/1:25,0:23:99:314,0,156	0/1:16,0:16:91.76:92,0,111	0/1:19,0:19:99:169,0,116	./.	1/1:11,4:15:28.26:387,28,0	1/1:1,12:12:3.01:57,3,0	./.	1/1:1,13:14:38.96:400,39,0	1/1:0,8:8:9.03:169,9,0	1/1:4,12:16:24.55:453,25,0
chr10	11517276	.	TG	T	218.97	PASS	AC=8;AF=0.160;AN=50;BaseQRankSum=4.684;DP=318;FS=30.078;HRun=2;HaplotypeScore=33.6102;InbreedingCoeff=0.8504;MQ=53.55;MQ0=5;MQRankSum=-4.479;QD=18.25;ReadPosRankSum=0.751;VQSLOD=1.8715;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:42.14:0,42,629	0/0:4,0:4:12.04:0,12,179	0/0:7,0:4:9.03:0,9,135	0/0:5,0:4:12.04:0,12,180	0/0:14,0:14:36.12:0,36,537	1/1:0,2:2:6.02:78,6,0	./.	0/0:17,0:15:45.15:0,45,674	0/0:10,0:10:21.07:0,21,315	0/0:10,0:10:27.09:0,27,404	0/0:11,0:11:30.10:0,30,450	1/1:0,2:2:6.02:78,6,0	./.	1/1:0,5:5:9.03:117,9,0	0/0:17,0:17:47.96:0,48,719	0/0:18,0:18:45.15:0,45,673	0/0:25,0:24:60.20:0,60,899	0/0:19,0:16:36.10:0,36,538	0/0:15,0:12:36.12:0,36,533	0/0:16,0:16:42.14:0,42,628	0/0:22,0:21:60.19:0,60,878	1/1:1,2:2:6.02:78,6,0	0/0:9,0:9:24.08:0,24,359	0/0:16,0:16:42.14:0,42,625	./.	0/0:18,0:17:48.16:0,48,733	0/0:23,0:23:60.20:0,60,899	0/0:9,0:9:27.09:0,27,399
chr10	11517341	.	C	CAAA	6629.85	PASS	AB=0.958;AC=46;AF=0.821;AN=56;BaseQRankSum=-5.268;DP=367;FS=14.900;HRun=11;HaplotypeScore=59.7004;InbreedingCoeff=0.5328;MQ=47.37;MQ0=14;MQRankSum=1.349;QD=19.33;ReadPosRankSum=-0.328;VQSLOD=1.5342;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:17,1:17:16.79:152,17,0	1/1:1,2:5:9.01:136,9,0	1/1:8,0:1:0.47:1,0,0	0/0:12,0:3:5.84:0,6,52	1/1:4,13:17:24.04:397,24,0	0/0:4,0:4:2.22:0,2,7	1/1:4,0:4:2.37:8,2,0	1/1:16,0:29:48.68:523,49,0	1/1:4,12:16:21.05:361,21,0	1/1:3,14:18:42.07:606,42,0	1/1:6,8:14:15.05:245,15,0	0/0:2,0:2:2.59:0,3,10	0/1:5,0:5:4.85:5,0,15	0/1:10,0:10:2.16:2,0,14	1/1:3,9:14:18.02:269,18,0	1/1:1,13:14:12.04:226,12,0	1/1:3,14:18:27.07:474,27,0	1/1:7,10:16:2.67:311,3,0	1/1:6,0:14:32.64:353,33,0	1/1:2,0:14:5.20:123,5,0	1/1:6,0:7:12.33:121,12,0	0/0:6,0:5:4.80:0,5,19	1/1:3,0:4:6.02:105,6,0	1/1:2,8:10:18.04:305,18,0	1/1:3,0:2:0.47:1,0,0	1/1:6,18:26:60.12:913,60,0	1/1:11,16:30:38.19:500,38,0	1/1:6,7:9:27.09:492,27,0
chr10	11517351	.	AAG	A	373.85	PASS	AB=0.988;AC=17;AF=0.304;AN=56;BaseQRankSum=3.632;DP=371;FS=13.977;HRun=0;HaplotypeScore=72.6134;InbreedingCoeff=0.4431;MQ=50.89;MQ0=12;MQRankSum=-5.488;QD=3.43;ReadPosRankSum=-4.130;VQSLOD=-0.7349;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:15,1:14:44.29:44,0,144	0/0:5,0:5:8.56:0,9,62	0/0:14,0:3:5.36:0,5,48	0/0:22,0:7:11.65:0,12,97	0/0:16,1:17:7.09:0,7,193	0/1:5,0:5:0.77:18,0,1	1/1:4,0:3:2.50:9,2,0	0/1:29,0:28:35.40:35,0,434	0/0:11,2:13:20.77:0,21,180	0/1:21,0:21:32.61:33,0,271	0/0:9,0:9:17.60:0,18,158	1/1:1,0:1:2.98:22,3,0	1/1:6,0:6:11.86:81,12,0	1/1:9,0:8:14.89:111,15,0	0/0:13,1:13:17.93:0,18,183	0/0:14,0:14:17.97:0,18,164	0/0:18,0:17:26.98:0,27,243	0/0:17,1:17:3.61:0,4,170	0/0:18,0:15:11.17:0,11,210	0/0:14,0:13:17.85:0,18,159	0/1:6,0:6:33.55:34,0,40	1/1:4,0:4:5.98:53,6,0	0/0:5,0:4:10.55:0,11,81	0/0:10,0:9:18.02:0,18,166	1/1:8,0:7:17.37:106,17,0	0/0:26,0:26:37.60:0,38,625	0/0:29,0:27:12.25:0,12,327	0/0:16,0:13:25.88:0,26,293
chr10	11517358	.	AAAG	A	608.09	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=6.873;DP=397;FS=13.015;HRun=0;HaplotypeScore=80.8312;InbreedingCoeff=0.7986;MQ=53.12;MQ0=11;MQRankSum=-4.771;QD=13.82;ReadPosRankSum=-2.954;VQSLOD=1.5912;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:14:16.92:0,17,373	0/0:4,0:4:9.03:0,9,206	0/0:19,0:3:5.06:0,5,116	0/0:28,0:10:18.63:0,19,268	0/0:15,0:15:27.09:0,27,578	1/1:7,0:7:5.29:120,5,0	0/1:4,0:3:0:0,0,0	0/0:30,0:29:63.43:0,63,1286	0/0:14,0:14:24.08:0,24,504	0/0:20,0:20:51.09:0,51,1009	0/0:11,0:11:30.10:0,30,544	1/1:1,1:2:3.90:50,4,0	1/1:3,5:8:15.30:125,15,0	1/1:5,5:9:18.04:160,18,0	0/0:15,0:14:24.08:0,24,485	0/0:14,0:14:21.07:0,21,450	0/0:18,0:17:33.11:0,33,681	0/0:18,0:18:5.97:0,6,565	0/0:18,0:14:22.51:0,23,631	0/0:14,0:13:18.06:0,18,372	0/0:8,0:8:13.29:0,13,236	1/1:3,1:4:2.09:36,2,0	0/0:7,0:6:18.06:0,18,311	0/0:10,0:9:21.07:0,21,450	1/1:5,4:8:21.02:280,21,0	0/0:25,0:25:75.20:0,75,1577	0/0:27,0:25:49.72:0,50,1019	0/0:22,0:20:60.20:0,60,1070
chr10	11517377	.	G	GA	1086.63	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=6.053;DP=441;FS=3.880;HRun=8;HaplotypeScore=74.0272;InbreedingCoeff=0.9100;MQ=67.82;MQ0=4;MQRankSum=-5.576;QD=19.06;ReadPosRankSum=-0.963;VQSLOD=3.3762;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:13:27.01:0,27,247	0/0:3,0:3:9:0,9,82	0/0:28,0:15:40.82:0,41,354	0/0:31,0:17:1.37:0,1,240	0/0:21,0:21:48.02:0,48,437	1/1:3,6:9:21.02:227,21,0	1/1:4,1:4:6.02:69,6,0	0/0:34,0:34:80.97:0,81,729	0/0:11,0:11:17.92:0,18,165	0/0:21,0:21:54.01:0,54,492	0/0:14,0:14:36.01:0,36,329	1/1:0,5:5:15.01:159,15,0	1/1:6,5:11:20.26:203,20,0	1/1:4,8:11:18.05:204,18,0	0/0:14,0:14:27.01:0,27,247	0/0:13,0:13:24:0,24,215	0/0:18,0:17:29.99:0,30,269	0/0:18,0:17:39.01:0,39,357	0/0:16,0:13:33.02:0,33,302	0/0:17,0:16:36.01:0,36,329	0/0:9,0:9:21.01:0,21,192	1/1:2,3:5:9.03:101,9,0	0/0:11,0:10:27.01:0,27,247	0/0:8,0:8:21.01:0,21,192	1/1:2,8:9:27.08:311,27,0	0/0:28,0:28:78.04:0,78,714	0/0:23,0:21:48:0,48,437	0/0:31,0:29:84.04:0,84,768
chr10	11518086	.	A	AC	21224.31	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-4.798;DP=596;FS=1.288;HRun=2;HaplotypeScore=51.2201;InbreedingCoeff=0.9396;MQ=71.32;MQ0=0;MQRankSum=-5.146;QD=36.53;ReadPosRankSum=4.076;VQSLOD=5.1992;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,44:45:99:1598,111,0	1/1:0,18:18:48.16:690,48,0	0/0:7,0:7:18:0,18,205	0/0:8,0:8:6.20:0,6,75	1/1:2,15:17:39.13:561,39,0	1/1:1,29:30:81.27:1166,81,0	1/1:4,31:35:78.26:1123,78,0	1/1:3,22:25:63.21:907,63,0	1/1:0,10:10:27.09:388,27,0	1/1:3,20:23:63.21:906,63,0	1/1:0,14:14:39.13:560,39,0	1/1:2,23:25:54.18:772,54,0	1/1:1,12:13:33.11:467,33,0	1/1:0,22:22:51.17:733,51,0	1/1:2,22:24:60.20:863,60,0	1/1:0,13:13:33.11:475,33,0	1/1:2,27:29:81.27:1166,81,0	1/1:1,24:25:63.21:907,63,0	1/1:3,21:24:66.16:903,66,0	1/1:1,14:15:36.12:518,36,0	1/1:3,53:56:99:1987,138,0	1/1:0,18:18:48.16:691,48,0	1/1:0,12:12:33.58:474,34,0	1/1:1,13:14:36.12:518,36,0	1/1:1,18:19:48.16:691,48,0	1/1:0,28:28:81.27:1166,81,0	1/1:1,13:14:33.11:472,33,0	1/1:0,13:13:36.12:518,36,0
chr10	11519757	.	TAAGAAA	T	2851.37	PASS	AB=0.924;AC=26;AF=0.464;AN=56;BaseQRankSum=11.629;DP=426;FS=7.454;HRun=0;HaplotypeScore=91.7791;InbreedingCoeff=-0.8471;MQ=63.55;MQ0=11;MQRankSum=-9.851;QD=8.08;ReadPosRankSum=7.520;VQSLOD=0.0477;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:33:99:159,0,267	0/1:14,0:14:92.54:97,0,93	0/0:40,0:10:15.85:0,16,150	0/0:32,0:13:20.12:0,20,211	0/1:13,0:13:60.39:168,0,60	0/1:14,1:15:71.25:209,0,71	0/1:7,0:7:34.74:65,0,35	0/1:14,2:15:99:136,0,107	0/1:12,1:13:88.89:89,0,97	0/1:17,0:16:99:189,0,103	0/1:16,1:17:99:152,0,104	0/1:12,0:13:25.05:111,0,25	0/1:7,0:6:14.38:14,0,31	0/1:6,0:9:50.59:102,0,51	0/1:16,2:18:99:193,0,106	0/1:10,2:11:47.39:155,0,47	0/1:9,6:15:96.33:117,0,96	0/1:4,4:7:49.89:72,0,50	0/1:19,0:17:89.79:90,0,176	0/1:13,0:13:5.84:6,0,189	0/1:8,1:9:12.04:12,0,83	0/1:17,0:18:93.83:158,0,94	0/1:7,0:7:31.10:86,0,31	0/1:4,0:4:17.09:17,0,18	0/1:16,1:17:27.67:178,0,28	0/1:17,0:17:99:103,0,198	0/1:11,2:14:33.82:263,0,34	0/1:7,1:8:49.91:63,0,50
chr10	11519833	.	GT	G	1243.18	PASS	AB=0.921;AC=10;AF=0.179;AN=56;BaseQRankSum=7.191;DP=511;FS=0.481;HRun=10;HaplotypeScore=63.6980;InbreedingCoeff=0.7097;MQ=70.39;MQ0=0;MQRankSum=0.336;QD=13.81;ReadPosRankSum=-2.007;VQSLOD=3.2303;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:75.19:0,75,821	0/0:10,0:10:0.34:0,0,196	0/1:13,1:13:2.52:3,0,169	0/0:7,0:7:9:0,9,90	0/0:27,1:28:52.15:0,52,796	0/0:19,1:20:19.03:0,19,426	0/0:7,1:9:0.86:0,1,220	1/1:3,16:19:47.99:416,48,0	0/0:14,0:14:36.02:0,36,371	0/0:20,1:21:22.05:0,22,458	0/0:25,1:26:43.13:0,43,702	0/0:17,0:17:48.01:0,48,491	0/0:13,0:13:36.10:0,36,398	0/0:18,0:18:51.14:0,51,564	0/0:20,0:20:39.11:0,39,431	0/0:11,0:11:29.91:0,30,289	0/0:31,0:32:81.01:0,81,864	0/0:22,0:22:63.13:0,63,683	1/1:2,13:15:38.98:339,39,0	1/1:2,20:22:53.88:458,54,0	1/1:1,9:10:20.99:182,21,0	0/1:9,1:10:4.18:4,0,164	0/0:14,0:14:39.06:0,39,418	0/0:7,0:7:15.04:0,15,166	0/0:22,1:23:28.10:0,28,538	0/0:17,0:18:38.16:0,38,459	0/0:26,1:27:40.06:0,40,646	0/0:30,1:32:66.99:0,67,925
chr10	11521496	.	G	GCCCACT	30166.60	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-2.366;DP=473;FS=24.234;HRun=0;HaplotypeScore=124.4268;InbreedingCoeff=0.9399;MQ=73.45;MQ0=0;MQRankSum=-10.623;QD=71.48;ReadPosRankSum=4.324;VQSLOD=3.0924;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,25:32:54.19:1863,54,0	1/1:3,3:6:12.04:371,12,0	0/0:23,0:23:63.18:0,63,1331	0/0:28,0:28:81.27:0,81,1708	1/1:5,19:25:48.16:1688,48,0	1/1:6,11:18:33.11:1041,33,0	1/1:7,19:27:66.18:2172,66,0	1/1:10,9:22:54.16:1402,54,0	1/1:2,12:16:36.12:1227,36,0	1/1:4,14:19:51.12:1552,51,0	1/1:1,10:14:24.08:784,24,0	1/1:2,7:10:15.05:533,15,0	1/1:3,11:15:39.13:1331,39,0	1/1:3,13:19:39.13:1384,39,0	1/1:1,15:17:36.12:1276,36,0	1/1:1,9:10:30.10:1066,30,0	1/1:2,13:15:30.10:1067,30,0	1/1:3,12:16:33.11:1175,33,0	1/1:7,6:16:39.13:1068,39,0	1/1:2,17:22:48.16:1681,48,0	1/1:3,7:11:18.05:504,18,0	1/1:1,10:11:27.09:903,27,0	1/1:1,14:17:36.12:1239,36,0	1/1:2,9:13:21.07:746,21,0	1/1:1,10:14:30.10:1048,30,0	1/1:1,16:20:51.18:1668,51,0	1/1:4,9:13:30.10:1060,30,0	1/1:0,4:4:9.03:320,9,0
chr10	11522238	.	A	ATTT	7868.57	PASS	AB=0.818;AC=44;AF=0.786;AN=56;BaseQRankSum=-2.388;DP=550;FS=4.724;HRun=15;HaplotypeScore=131.9640;InbreedingCoeff=0.4865;MQ=75.47;MQ0=4;MQRankSum=-3.585;QD=16.71;ReadPosRankSum=-2.271;VQSLOD=2.8676;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,11:26:49.18:638,49,0	1/1:3,2:5:12.04:196,12,0	0/0:30,0:20:8:0,8,55	0/1:19,0:17:5.43:16,0,5	1/1:8,4:23:52.31:664,52,0	1/1:13,7:20:18.06:262,18,0	1/1:14,0:16:30.01:415,30,0	1/1:19,0:27:29.06:219,29,0	1/1:8,5:14:20.84:235,21,0	1/1:7,2:18:41.99:488,42,0	1/1:3,11:14:33.06:479,33,0	0/0:19,0:22:6.30:0,6,85	0/1:15,0:15:8.71:9,0,102	0/0:14,0:15:0.70:0,1,170	0/1:7,1:15:8.43:211,0,8	1/1:6,6:16:12.02:161,12,0	1/1:13,9:26:6.48:425,6,0	1/1:8,4:28:36.49:474,36,0	0/1:9,0:18:1.30:183,0,1	1/1:4,0:14:35.78:303,36,0	1/1:7,1:17:20.26:139,20,0	0/0:10,0:10:20.88:0,21,206	1/1:7,7:17:4.43:374,4,0	1/1:10,3:25:23.50:246,23,0	1/1:5,0:13:7.82:135,8,0	1/1:23,4:30:57.02:699,57,0	1/1:18,0:19:31.21:337,31,0	1/1:15,6:33:41.89:563,42,0
chr10	11523358	.	A	AGG	29877.88	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-8.276;DP=669;FS=0.708;HRun=1;HaplotypeScore=77.0360;InbreedingCoeff=0.9826;MQ=85.75;MQ0=5;MQRankSum=-8.592;QD=47.96;ReadPosRankSum=5.435;VQSLOD=4.8352;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,35:39:74.78:1366,75,0	1/1:1,22:23:62.43:1166,62,0	0/0:21,0:21:44.96:0,45,554	0/0:25,0:25:38.88:0,39,577	1/1:0,13:13:39.09:715,39,0	1/1:1,17:19:45.14:869,45,0	1/1:3,27:30:75.26:1440,75,0	1/1:1,26:27:78.25:1445,78,0	1/1:0,22:21:57.20:1101,57,0	1/1:1,14:15:39.13:753,39,0	1/1:0,5:5:12.04:232,12,0	1/1:1,25:25:72.25:1389,72,0	1/1:0,21:21:57.20:1101,57,0	1/1:2,24:28:69.24:1321,69,0	1/1:0,36:36:99:2027,105,0	1/1:1,31:33:84.27:1623,84,0	1/1:2,47:49:99:2254,117,0	1/1:1,32:34:84.29:1623,84,0	1/1:2,18:21:63.15:995,63,0	1/1:1,16:17:45.11:819,45,0	1/1:0,45:45:99:2311,120,0	1/1:0,14:14:27.09:522,27,0	1/1:2,10:12:27.09:522,27,0	1/1:1,28:28:75.26:1449,75,0	1/1:1,10:11:27.09:515,27,0	1/1:6,14:20:45.12:754,45,0	1/1:0,20:20:48.16:927,48,0	1/1:0,12:12:33.11:638,33,0
chr10	11524002	.	G	GTTT	14548.54	PASS	AB=0.923;AC=51;AF=0.911;AN=56;BaseQRankSum=-3.094;DP=466;FS=2.859;HRun=9;HaplotypeScore=106.1550;InbreedingCoeff=0.7252;MQ=67.85;MQ0=0;MQRankSum=-4.199;QD=32.69;ReadPosRankSum=2.250;VQSLOD=4.1127;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,13:16:33.11:615,33,0	1/1:2,1:5:12.04:191,12,0	0/0:11,0:10:11.06:0,11,117	0/0:9,0:10:3.98:0,4,40	1/1:14,11:29:66.16:1058,66,0	1/1:17,0:27:63.01:754,63,0	1/1:8,1:13:18.06:273,18,0	1/1:8,13:22:42.04:689,42,0	1/1:5,6:11:24.07:437,24,0	1/1:8,6:15:36.09:579,36,0	1/1:4,13:19:45.02:807,45,0	1/1:6,0:12:27.01:335,27,0	1/1:7,0:10:18.02:244,18,0	1/1:6,0:14:27:340,27,0	1/1:4,11:16:36.04:608,36,0	1/1:5,18:23:45.15:877,45,0	1/1:3,12:16:33.11:604,33,0	1/1:5,15:22:42.14:787,42,0	1/1:10,6:20:30.52:503,31,0	1/1:8,6:16:27.07:419,27,0	1/1:2,5:9:12.04:196,12,0	0/1:11,0:12:1.32:180,0,1	1/1:9,14:23:47.97:816,48,0	1/1:2,7:12:23.99:382,24,0	1/1:2,0:18:41.12:532,41,0	1/1:19,10:30:54.13:911,54,0	1/1:6,16:23:54.18:1011,54,0	1/1:5,6:12:18.40:402,18,0
chr10	11524072	.	AAAAAC	A	12722.79	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=2.207;DP=458;FS=12.590;HRun=0;HaplotypeScore=162.3924;InbreedingCoeff=0.9092;MQ=63.93;MQ0=0;MQRankSum=-6.642;QD=30.51;ReadPosRankSum=4.275;VQSLOD=4.1455;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,8:14:26.96:437,27,0	1/1:2,7:9:18.06:344,18,0	0/0:19,0:18:26.27:0,26,713	0/0:22,0:19:39.03:0,39,864	1/1:5,21:26:53.71:792,54,0	1/1:1,0:16:39.12:454,39,0	1/1:3,0:22:39.12:454,39,0	1/1:7,15:22:44.98:642,45,0	1/1:2,12:14:36.06:649,36,0	1/1:8,17:25:51.16:922,51,0	1/1:4,15:19:41.94:684,42,0	1/1:6,0:11:15.04:175,15,0	1/1:2,0:15:36.10:414,36,0	1/1:5,0:15:21.06:238,21,0	1/1:5,10:15:33.01:589,33,0	1/1:6,10:16:30.10:573,30,0	1/1:9,8:17:32.68:393,33,0	1/1:9,8:17:32.94:520,33,0	1/1:7,8:15:23.99:347,24,0	1/1:5,13:18:36:649,36,0	1/1:5,3:8:6.02:115,6,0	1/1:2,0:12:15.04:169,15,0	1/1:5,12:17:41.56:603,42,0	1/1:9,7:16:26.92:403,27,0	1/1:5,8:13:21:362,21,0	1/1:6,13:19:39.10:669,39,0	1/1:5,16:21:51.04:896,51,0	1/1:0,5:5:12.04:229,12,0
chr10	11524308	.	TACACACACACACACACACAC	T	6918.59	PASS	AB=0.790;AC=43;AF=0.860;AN=50;BaseQRankSum=4.625;DP=463;FS=8.985;HRun=0;HaplotypeScore=210.4253;InbreedingCoeff=-0.0969;MQ=61.75;MQ0=11;MQRankSum=-2.285;QD=18.75;ReadPosRankSum=0.672;VQSLOD=2.9158;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:21,5:26:2.82:159,3,0	1/1:3,1:4:6.02:299,6,0	./.	0/0:34,0:17:3.01:0,3,60	1/1:10,4:14:6.02:96,6,0	1/1:11,3:12:6.02:319,6,0	1/1:20,6:25:12.04:618,12,0	0/1:20,0:20:2.38:42,0,2	1/1:11,7:18:12.04:635,12,0	1/1:13,0:13:1.74:72,2,0	1/1:3,3:6:3.01:159,3,0	0/1:8,0:12:98.07:98,0,116	0/1:8,0:12:55.06:126,0,55	0/1:6,0:13:97.53:98,0,108	1/1:12,12:24:23.70:1275,24,0	1/1:15,4:19:10.75:635,11,0	1/1:15,4:19:6.02:319,6,0	1/1:12,0:12:2.59:112,3,0	1/1:10,0:9:3.01:47,3,0	1/1:7,9:17:15.05:735,15,0	1/1:26,0:24:3.01:98,3,0	./.	1/1:7,1:8:3.01:118,3,0	1/1:11,4:15:3.01:160,3,0	1/1:5,0:9:6.02:159,6,0	1/1:14,8:22:18.05:386,18,0	./.	0/1:6,2:8:99:153,0,148
chr10	11524542	.	G	GA	5457.29	PASS	AB=0.671;AC=32;AF=0.571;AN=56;BaseQRankSum=-5.391;DP=555;FS=2.957;HRun=13;HaplotypeScore=71.7463;InbreedingCoeff=0.2530;MQ=61.34;MQ0=3;MQRankSum=0.327;QD=12.55;ReadPosRankSum=-0.525;VQSLOD=4.8446;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,20:26:50.77:447,51,0	0/1:4,4:8:8.61:63,0,9	0/1:21,1:14:18.65:54,0,19	0/0:15,0:9:4.45:0,4,26	0/1:7,8:18:6.38:221,0,6	0/0:17,0:17:41.59:0,42,288	0/0:21,0:21:27.28:0,27,303	1/1:15,22:39:4.31:560,4,0	1/1:11,6:19:5.30:247,5,0	1/1:6,12:19:29.87:264,30,0	1/1:5,12:19:16.01:258,16,0	0/0:18,0:18:47.51:0,48,329	0/0:17,2:19:7.78:0,8,197	0/0:16,0:16:23.70:0,24,162	1/1:3,9:12:24.03:223,24,0	1/1:2,13:16:35.88:321,36,0	0/1:3,12:16:14.30:155,0,14	0/1:5,7:14:20.47:92,0,20	0/1:13,13:30:22.76:332,0,23	1/1:6,13:20:21.35:323,21,0	1/1:4,11:15:27.34:238,27,0	0/1:15,2:18:15:15,0,190	0/1:11,10:22:49.09:149,0,49	0/1:5,25:32:7.44:483,0,7	0/0:3,0:13:20.21:0,20,82	0/1:9,24:35:4.51:496,0,5	1/1:4,17:21:42.04:389,42,0	1/1:4,7:12:14.94:129,15,0
chr10	11524639	.	CTTTGTT	C	15272.01	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=9.541;DP=389;FS=0.660;HRun=0;HaplotypeScore=177.2302;InbreedingCoeff=0.9053;MQ=70.78;MQ0=0;MQRankSum=-9.717;QD=43.14;ReadPosRankSum=5.537;VQSLOD=4.4368;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,12:15:30.63:447,31,0	1/1:0,4:4:12.04:233,12,0	0/0:25,0:25:75.24:0,75,2312	0/0:10,0:10:30:0,30,938	1/1:4,23:26:65.26:1058,65,0	1/1:2,22:25:74.73:1271,75,0	1/1:1,12:13:38.78:634,39,0	1/1:0,13:23:53.60:775,54,0	1/1:1,7:8:24.07:419,24,0	1/1:3,8:11:30.09:495,30,0	1/1:2,14:16:41.11:707,41,0	1/1:5,9:14:36.27:536,36,0	1/1:0,11:11:33.11:580,33,0	1/1:4,9:13:35.87:545,36,0	1/1:1,9:10:29.59:514,30,0	1/1:1,11:12:34.67:600,35,0	1/1:4,8:12:29.57:470,30,0	1/1:2,1:3:8.01:81,8,0	1/1:3,8:12:36.03:547,36,0	1/1:3,16:20:58.66:932,59,0	1/1:4,4:8:7.27:113,7,0	1/1:0,17:17:39.58:665,40,0	1/1:1,17:18:51.91:906,52,0	1/1:3,9:12:27.05:431,27,0	1/1:2,14:16:40.38:712,40,0	1/1:2,14:16:45.53:797,46,0	1/1:4,7:12:32.01:505,32,0	1/1:0,5:6:18.02:298,18,0
chr10	11524646	.	CTTT	C	9829.34	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=9.792;DP=380;FS=1.377;HRun=3;HaplotypeScore=169.4409;InbreedingCoeff=0.9119;MQ=73.61;MQ0=0;MQRankSum=-9.830;QD=28.66;ReadPosRankSum=6.403;VQSLOD=2.3670;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,12:13:32.87:314,33,0	1/1:0,4:4:12.04:148,12,0	0/0:24,0:24:72.25:0,72,1685	0/0:13,0:13:36.11:0,36,729	1/1:1,24:25:67.07:694,67,0	1/1:1,22:24:72.14:774,72,0	1/1:0,12:14:38.91:406,39,0	1/1:10,13:23:68.09:594,68,0	1/1:0,7:7:21.06:247,21,0	1/1:1,8:9:24.04:261,24,0	1/1:1,14:15:45.03:499,45,0	1/1:0,9:14:38.59:368,39,0	1/1:0,11:11:33.07:350,33,0	1/1:1,9:12:35.67:336,36,0	1/1:0,9:12:30.04:336,30,0	1/1:0,11:12:35.96:381,36,0	1/1:0,8:11:26.87:279,27,0	1/1:0,1:3:5.93:51,6,0	1/1:1,8:10:30.03:312,30,0	1/1:1,16:18:54.02:561,54,0	1/1:1,4:7:11.86:108,12,0	1/1:1,15:16:41.72:419,42,0	1/1:0,17:19:53.94:592,54,0	1/1:0,9:11:27.03:274,27,0	1/1:1,14:15:44.74:463,45,0	1/1:0,14:19:56.50:570,57,0	1/1:1,7:11:26.90:290,27,0	1/1:2,5:7:20.72:202,21,0
chr10	11524813	.	T	TTAG	30530.70	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-6.192;DP=523;FS=7.843;HRun=0;HaplotypeScore=60.3496;InbreedingCoeff=0.9751;MQ=71.78;MQ0=3;MQRankSum=-7.385;QD=61.06;ReadPosRankSum=4.412;VQSLOD=6.7935;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,26:29:75.26:1748,75,0	1/1:0,5:5:15.05:342,15,0	0/0:16,0:16:37.91:0,38,543	0/0:7,0:7:18.06:0,18,306	1/1:4,36:40:99:2315,99,0	1/1:1,25:26:60.21:1406,60,0	1/1:3,11:15:36.12:838,36,0	1/1:7,16:23:66.23:1521,66,0	1/1:2,15:17:51.18:1176,51,0	1/1:2,16:22:63.20:1355,63,0	1/1:0,16:17:45.15:1064,45,0	1/1:6,13:20:42.14:963,42,0	1/1:2,11:13:39.13:897,39,0	1/1:0,12:12:33.11:780,33,0	1/1:2,18:20:48.16:1121,48,0	1/1:1,13:14:39.13:910,39,0	1/1:1,14:15:42.14:980,42,0	1/1:2,11:13:30.10:709,30,0	1/1:2,11:14:42.13:880,42,0	1/1:3,28:33:90.31:2074,90,0	1/1:0,13:13:39.13:898,39,0	1/1:1,24:25:69.24:1630,69,0	1/1:0,26:27:75.26:1760,75,0	1/1:2,7:8:18.06:413,18,0	1/1:1,16:18:45.15:1052,45,0	1/1:2,19:21:63.22:1489,63,0	1/1:4,25:29:81.28:1868,81,0	1/1:1,4:5:15.05:341,15,0
chr10	11525314	.	GAGACAGACAGAC	G	33615.74	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=5.564;DP=675;FS=2.131;HRun=0;HaplotypeScore=251.0904;InbreedingCoeff=0.8681;MQ=60.58;MQ0=1;MQRankSum=-8.961;QD=54.84;ReadPosRankSum=7.046;VQSLOD=4.0449;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,29:40:54.19:1943,54,0	1/1:1,8:9:15.05:540,15,0	0/0:24,0:20:42.14:0,42,1752	0/0:38,0:33:73.79:0,74,3287	1/1:8,20:28:42.06:1320,42,0	1/1:5,15:20:36.12:1287,36,0	1/1:9,19:28:45.15:1609,45,0	1/1:10,13:23:39.12:958,39,0	1/1:8,19:27:45.15:1619,45,0	1/1:13,22:35:63.20:2043,63,0	1/1:5,6:11:12.04:432,12,0	1/1:6,23:28:48.16:1722,48,0	1/1:6,10:16:21.07:756,21,0	1/1:5,13:18:33.11:1188,33,0	1/1:0,40:40:99:3556,99,0	1/1:3,26:29:48.16:1727,48,0	1/1:10,16:26:30.10:1080,30,0	1/1:1,15:16:39.13:1402,39,0	1/1:9,12:21:36.06:714,36,0	1/1:9,18:27:45.11:1444,45,0	1/1:10,16:26:9.03:319,9,0	1/1:5,26:31:57.20:2044,57,0	1/1:5,11:16:23.94:863,24,0	1/1:10,18:28:24.55:794,25,0	1/1:3,16:19:39.13:1403,39,0	1/1:4,12:16:36.05:1123,36,0	1/1:8,20:27:45.15:1620,45,0	1/1:0,6:6:3.01:108,3,0
chr10	11525928	.	G	GC	2158.17	PASS	AB=0.710;AC=25;AF=0.446;AN=56;BaseQRankSum=5.427;DP=416;FS=8.799;HRun=5;HaplotypeScore=60.5034;InbreedingCoeff=0.3676;MQ=93.46;MQ0=0;MQRankSum=-2.708;QD=9.90;ReadPosRankSum=-0.825;VQSLOD=0.2023;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:11,7:18:0.96:174,0,1	0/1:1,4:5:4.86:99,0,5	0/0:23,0:27:45.14:0,45,459	0/0:24,0:24:54.02:0,54,528	1/1:2,3:5:3.01:37,3,0	0/0:15,0:15:42.10:0,42,450	0/0:30,0:30:70.48:0,70,759	0/0:10,0:10:9.22:0,9,53	0/1:6,10:16:6.31:207,0,6	1/1:2,4:7:12.03:138,12,0	0/1:4,3:7:0.41:102,0,0	0/0:27,0:27:78.19:0,78,838	0/0:16,0:16:45.10:0,45,475	0/0:18,0:18:48.12:0,48,515	0/1:7,8:15:30.46:59,0,30	1/1:3,11:14:10.01:162,10,0	0/1:4,21:25:8.47:286,0,8	0/1:7,14:21:7.29:334,0,7	0/1:12,0:12:6.96:7,0,63	0/0:6,0:6:8.61:0,9,48	0/1:22,0:22:12.64:13,0,119	0/0:10,0:10:27.07:0,27,290	1/1:5,0:5:0.89:2,1,0	1/1:5,19:24:15.08:318,15,0	0/0:15,0:15:5.57:0,6,64	1/1:5,4:9:10.34:146,10,0	1/1:4,5:9:13.54:181,14,0	1/1:0,4:4:6.02:74,6,0
chr10	11526674	.	GA	G	9880.61	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=6.247;DP=511;FS=3.290;HRun=9;HaplotypeScore=49.9587;InbreedingCoeff=0.9952;MQ=66.40;MQ0=1;MQRankSum=-2.298;QD=24.58;ReadPosRankSum=3.231;VQSLOD=5.6099;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,30:31:87.05:796,87,0	1/1:0,9:9:24.01:220,24,0	0/0:15,0:12:33.09:0,33,368	0/0:15,0:13:15.56:0,16,295	1/1:2,27:29:81.04:741,81,0	0/0:22,0:22:51.14:0,51,580	0/0:8,0:8:21.06:0,21,242	1/1:6,19:25:57.02:522,57,0	1/1:0,15:15:39.02:357,39,0	1/1:1,26:27:78.03:710,78,0	1/1:2,20:22:60.03:549,60,0	0/0:13,0:13:33.10:0,33,380	0/0:12,0:12:30.09:0,30,344	0/0:10,0:10:30.09:0,30,346	1/1:0,13:13:39.02:357,39,0	1/1:0,16:16:48.03:439,48,0	1/1:2,35:37:96.04:879,96,0	1/1:1,17:18:45.02:412,45,0	1/1:3,20:23:60.02:549,60,0	1/1:2,20:22:57.02:521,57,0	1/1:1,9:10:27.01:247,27,0	0/0:14,0:14:33.10:0,33,381	1/1:1,20:21:54.03:494,54,0	1/1:0,7:7:21.01:192,21,0	1/1:1,23:24:69.04:631,69,0	1/1:4,26:30:75.03:686,75,0	1/1:0,13:13:36.02:330,36,0	1/1:1,9:10:27.01:247,27,0
chr10	11526738	.	C	CTT	539.54	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=1.065;DP=483;FS=4.532;HRun=10;HaplotypeScore=93.7594;InbreedingCoeff=0.6764;MQ=70.46;MQ0=0;MQRankSum=-1.045;QD=18.60;ReadPosRankSum=-1.057;VQSLOD=2.5896;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:30:75.10:0,75,754	0/0:7,0:7:18.04:0,18,183	0/0:7,0:6:6.81:0,7,49	0/1:9,0:8:2.06:2,0,55	0/0:21,0:21:62.97:0,63,623	0/0:18,0:18:45.07:0,45,458	0/0:7,0:8:20.76:0,21,195	0/0:21,0:21:29.95:0,30,305	0/0:17,0:17:42.04:0,42,420	0/0:22,0:22:57.12:0,57,575	0/0:26,0:28:65.80:0,66,705	0/0:15,0:15:39.07:0,39,397	0/0:11,0:12:32.81:0,33,317	0/0:11,0:11:33.08:0,33,336	0/0:16,0:16:45.08:0,45,448	0/0:9,0:9:24.05:0,24,244	0/0:23,0:23:63.09:0,63,629	0/0:26,0:26:60.07:0,60,609	0/0:22,0:22:60.10:0,60,600	0/0:22,0:24:59.60:0,60,631	0/0:8,0:8:21.03:0,21,207	0/0:14,0:14:42.08:0,42,420	0/0:21,0:21:48.04:0,48,488	0/0:4,0:4:12.03:0,12,122	1/1:7,12:20:45.88:634,46,0	0/0:24,0:25:68.89:0,69,683	0/0:20,0:20:48.03:0,48,480	0/0:24,0:25:53.78:0,54,601
chr10	11530608	.	G	GAC	2034.52	PASS	AB=0.832;AC=34;AF=0.630;AN=54;BaseQRankSum=-4.452;DP=520;FS=4.161;HRun=0;HaplotypeScore=79.7190;InbreedingCoeff=0.0113;MQ=70.12;MQ0=7;MQRankSum=0.105;QD=4.75;ReadPosRankSum=0.113;VQSLOD=2.3997;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:24,5:29:38.05:118,0,38	1/1:1,0:1:2.90:16,3,0	0/1:29,0:19:0:0,0,0	0/1:40,0:30:0:0,0,0	0/1:19,4:23:8.81:80,0,9	0/0:11,0:16:11.94:0,12,61	0/0:16,0:27:16.88:0,17,81	1/1:20,0:20:2.84:14,3,0	0/1:13,6:22:34.68:160,0,35	1/1:18,0:18:10.27:119,10,0	0/1:8,4:12:26.35:38,0,26	1/1:14,0:16:6:52,6,0	1/1:10,0:14:6.01:63,6,0	1/1:6,0:10:3:26,3,0	1/1:11,13:24:24.07:355,24,0	1/1:8,7:15:12.04:178,12,0	0/1:16,1:19:40.79:88,0,41	0/1:11,5:17:16.48:202,0,16	./.	0/0:10,0:15:11.36:0,11,56	0/0:20,0:25:5.67:0,6,28	1/1:7,0:11:6:53,6,0	0/1:9,6:14:17.40:79,0,17	0/1:11,8:20:36.19:47,0,36	1/1:7,7:14:9.03:133,9,0	1/1:15,5:20:15.05:219,15,0	0/1:20,1:21:49.76:117,0,50	0/1:12,3:15:35.37:35,0,56
chr10	11532157	.	TAATAATATA	T	3974.28	PASS	AB=0.882;AC=34;AF=0.654;AN=52;BaseQRankSum=-0.207;DP=166;FS=1.787;HRun=0;HaplotypeScore=48.7027;InbreedingCoeff=0.4168;MQ=60.24;MQ0=3;MQRankSum=2.857;QD=26.67;ReadPosRankSum=-0.445;VQSLOD=2.4628;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,0:6:9.03:215,9,0	1/1:0,4:4:9.02:100,9,0	0/0:2,0:1:3.01:0,3,59	0/0:2,0:2:5.93:0,6,79	1/1:0,9:9:21.06:280,21,0	0/0:5,0:5:15.05:0,15,302	0/1:2,0:2:31.31:31,0,56	1/1:32,0:31:15.14:744,15,0	1/1:7,0:7:21.05:267,21,0	1/1:0,4:4:12.04:241,12,0	./.	0/0:3,0:3:9.03:0,9,218	0/0:2,0:2:6.02:0,6,175	0/0:2,0:2:6.02:0,6,99	1/1:5,0:5:9.03:143,9,0	1/1:0,6:6:6.02:188,6,0	0/1:2,16:18:23.65:207,0,24	1/1:1,14:15:9.03:283,9,0	0/1:5,0:5:5.94:141,0,6	1/1:4,0:4:12.03:174,12,0	./.	0/0:1,0:1:3.01:0,3,86	1/1:0,4:4:5.72:127,6,0	1/1:0,4:4:3.01:33,3,0	0/1:4,0:4:33.04:33,0,37	1/1:6,0:7:21.07:383,21,0	1/1:0,9:9:9.03:283,9,0	1/1:4,0:3:6.02:100,6,0
chr10	11532160	.	TAATATA	T	3895.72	PASS	AB=1.000;AC=39;AF=0.722;AN=54;BaseQRankSum=0.319;DP=173;FS=4.576;HRun=0;HaplotypeScore=41.1365;InbreedingCoeff=0.6002;MQ=60.93;MQ0=3;MQRankSum=1.334;QD=25.46;ReadPosRankSum=0.456;VQSLOD=2.7750;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,0:7:5.08:129,5,0	1/1:4,0:4:9.02:100,9,0	0/0:2,0:1:3.01:0,3,59	0/0:2,0:2:5.93:0,6,79	1/1:9,0:9:21.05:243,21,0	0/0:6,0:6:18.06:0,18,253	0/1:3,0:3:15.15:15,0,78	1/1:1,30:30:90.06:1212,90,0	1/1:6,0:6:18.04:280,18,0	1/1:4,0:4:12.04:199,12,0	1/1:1,0:1:3.01:44,3,0	0/0:4,0:4:11.40:0,11,195	0/0:2,0:2:6.02:0,6,124	0/0:2,0:2:6.02:0,6,99	1/1:5,0:5:9:102,9,0	1/1:6,0:6:6.02:105,6,0	1/1:18,0:18:7.81:144,8,0	1/1:14,0:14:9.03:158,9,0	1/1:5,0:5:12.04:170,12,0	1/1:2,2:4:12.03:164,12,0	./.	0/0:2,0:2:6.02:0,6,119	1/1:4,0:4:5.91:86,6,0	1/1:4,0:4:3.01:33,3,0	1/1:5,0:5:14.84:142,15,0	1/1:1,6:7:21.05:351,21,0	1/1:9,0:9:9.03:159,9,0	1/1:7,0:6:5.99:60,6,0
chr10	11532163	.	TATA	T	2893.62	PASS	AC=38;AF=0.704;AN=54;BaseQRankSum=0.852;DP=180;FS=8.052;HRun=0;HaplotypeScore=37.0489;InbreedingCoeff=0.6818;MQ=63.94;MQ0=2;MQRankSum=1.240;QD=18.67;ReadPosRankSum=1.171;VQSLOD=2.0292;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,5:7:6.02:83,6,0	1/1:4,0:4:9.02:100,9,0	0/0:3,0:2:6.02:0,6,98	0/0:2,0:2:5.93:0,6,79	1/1:9,0:9:18.05:218,18,0	0/0:6,0:6:17.99:0,18,199	0/0:2,0:2:6.01:0,6,78	1/1:30,0:30:66.19:885,66,0	1/1:6,0:6:18.06:250,18,0	1/1:4,0:4:12.04:174,12,0	1/1:1,0:1:3.01:44,3,0	0/0:3,0:5:12.92:0,13,174	0/0:1,0:2:6.01:0,6,83	0/0:3,0:3:9.03:0,9,149	1/1:1,5:6:6.02:80,6,0	1/1:6,0:6:6.01:63,6,0	1/1:17,0:18:11.31:132,11,0	1/1:14,0:14:9.02:95,9,0	1/1:5,0:5:9.03:128,9,0	1/1:5,0:5:9.03:121,9,0	./.	0/0:2,0:2:6.02:0,6,102	1/1:4,0:4:5.71:66,6,0	1/1:4,0:4:3.01:33,3,0	1/1:5,0:5:15.05:220,15,0	1/1:7,0:7:18.06:245,18,0	1/1:9,0:9:9.02:96,9,0	1/1:3,8:10:3.01:38,3,0
chr10	11533040	.	TCACA	T	2413.89	PASS	AB=0.818;AC=28;AF=0.583;AN=48;BaseQRankSum=0.923;DP=487;FS=0.942;HRun=0;HaplotypeScore=81.3066;InbreedingCoeff=0.4133;MQ=70.00;MQ0=8;MQRankSum=-0.704;QD=8.02;ReadPosRankSum=1.731;VQSLOD=2.2533;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:27,1:28:2.11:62,0,2	1/1:5,5:10:12.04:186,12,0	./.	./.	0/1:8,3:11:0:0,0,0	0/1:19,6:27:0.43:109,0,0	1/1:8,4:12:2.09:45,2,0	./.	1/1:11,7:18:15.05:232,15,0	./.	1/1:8,3:11:6.02:93,6,0	0/0:9,0:10:6.02:0,6,102	0/0:7,0:7:12.04:0,12,259	0/0:12,0:12:12.51:0,13,269	1/1:10,10:21:21.06:306,21,0	1/1:9,3:14:15.04:195,15,0	1/1:16,8:25:15.04:213,15,0	0/1:12,4:16:24.84:171,0,25	0/0:19,0:18:5.75:0,6,53	0/0:11,0:14:5.75:0,6,42	0/1:17,1:19:5.04:42,0,5	0/0:11,0:10:11.83:0,12,204	1/1:10,4:14:6.02:93,6,0	1/1:13,7:21:18.05:260,18,0	1/1:9,0:16:3:28,3,0	0/0:12,0:12:0.47:0,0,1	1/1:14,7:20:18.06:278,18,0	0/1:9,8:17:27.04:257,0,27
chr10	11535098	.	A	AG	3893.24	PASS	AB=0.771;AC=37;AF=0.661;AN=56;BaseQRankSum=13.969;DP=336;FS=0.420;HRun=1;HaplotypeScore=160.9372;InbreedingCoeff=0.7128;MQ=99.20;MQ0=0;MQRankSum=-13.750;QD=22.00;ReadPosRankSum=6.612;VQSLOD=3.5265;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,8:12:26.14:240,26,0	0/1:3,6:9:7.10:147,0,7	0/0:19,0:19:53.96:0,54,711	0/0:24,0:24:59.12:0,59,720	1/1:4,13:17:8.29:252,8,0	0/0:24,0:24:72.24:0,72,1005	0/0:25,0:25:75.24:0,75,1032	0/1:3,0:3:7.69:42,0,8	1/1:3,9:12:25.95:294,26,0	1/1:1,9:10:24.22:270,24,0	1/1:2,6:8:5.19:153,5,0	0/0:13,0:13:39.13:0,39,545	0/0:21,0:21:63.21:0,63,881	0/0:16,0:16:45.15:0,45,629	1/1:1,16:17:51.08:494,51,0	1/1:2,7:9:26.77:236,27,0	1/1:6,5:11:8.02:201,8,0	0/1:3,2:5:9.77:47,0,10	1/1:0,6:6:18.04:184,18,0	1/1:2,11:13:24.46:293,24,0	1/1:0,1:1:3:29,3,0	0/0:17,0:17:42.14:0,42,581	1/1:2,8:10:24.49:222,24,0	1/1:1,10:11:25.43:209,25,0	1/1:1,4:5:12.02:114,12,0	1/1:2,5:7:18.02:187,18,0	1/1:1,5:6:18.03:189,18,0	1/1:1,4:4:9.02:88,9,0
chr10	11535099	.	C	CAGTGCCAGGGCACCCAG	46003.96	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-3.235;DP=442;FS=4.070;HRun=0;HaplotypeScore=203.9965;InbreedingCoeff=0.9764;MQ=86.86;MQ0=0;MQRankSum=-15.296;QD=161.99;ReadPosRankSum=3.492;VQSLOD=4.7371;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,8:23:51.17:3466,51,0	1/1:5,6:11:33.10:1866,33,0	0/0:18,0:18:51.12:0,51,1962	0/0:23,0:23:57.19:0,57,2049	1/1:11,12:24:39.13:2870,39,0	0/0:24,0:24:72.23:0,72,3217	0/0:25,0:25:75.22:0,75,2917	1/1:15,0:15:33.10:1737,33,0	1/1:6,9:15:45.15:2967,45,0	1/1:8,9:17:48.16:3207,48,0	1/1:8,6:14:27.08:1855,27,0	0/0:13,0:13:39.13:0,39,1794	0/0:21,0:21:63.22:0,63,3115	0/0:16,0:16:45.15:0,45,2233	1/1:5,16:21:63.22:4347,63,0	1/1:3,7:10:27.09:1865,27,0	1/1:8,5:13:24.05:1448,24,0	1/1:4,2:6:15.05:836,15,0	1/1:9,6:15:39.13:2522,39,0	1/1:12,11:23:60.21:4292,60,0	1/1:3,1:4:9.03:698,9,0	0/0:18,0:18:45.14:0,45,1965	1/1:9,8:17:33.11:2418,33,0	1/1:3,10:13:27.09:2029,27,0	1/1:4,4:8:21.07:1375,21,0	1/1:11,5:16:45.13:2905,45,0	1/1:9,5:14:42.10:2598,42,0	1/1:1,4:4:9.03:702,9,0
chr10	11535496	.	AAAGGAC	A	1202.29	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.873;DP=741;FS=6.195;HRun=0;HaplotypeScore=156.4161;InbreedingCoeff=0.9609;MQ=57.21;MQ0=2;MQRankSum=-6.406;QD=60.11;ReadPosRankSum=-0.561;VQSLOD=3.3800;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,105,3678	0/0:13,0:13:39.12:0,39,1310	0/0:26,0:18:10.86:0,11,1453	0/0:27,0:24:66.22:0,66,2157	0/0:25,0:25:72.25:0,72,2594	0/0:23,0:23:54.19:0,54,1942	0/0:34,0:34:99:0,99,3373	0/0:25,0:25:69.24:0,69,2377	0/0:38,0:38:99:0,105,3711	0/0:33,0:33:90.31:0,90,3052	0/0:19,0:18:48.16:0,48,1621	0/0:25,0:25:69.24:0,69,2403	0/0:26,0:26:66.20:0,66,2240	0/0:23,0:23:63.22:0,63,2190	0/0:26,0:26:60.20:0,60,2059	0/0:17,0:17:36.12:0,36,1297	0/0:43,0:43:99:0,123,4279	0/0:26,0:26:78.27:0,78,2794	0/0:19,0:17:42.14:0,42,1382	0/0:26,0:26:75.26:0,75,2643	0/0:30,0:30:90.31:0,90,3074	0/0:28,0:28:78.25:0,78,2715	0/0:26,0:26:69.22:0,69,2402	0/0:30,0:30:84.27:0,84,2891	1/1:0,20:20:54.19:1297,54,0	0/0:34,0:33:99:0,102,3386	0/0:33,0:33:96.33:0,96,3441	0/0:9,0:9:27.09:0,27,959
chr10	11535738	.	GTGA	G	453.69	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.726;DP=738;FS=1.121;HRun=0;HaplotypeScore=100.4013;InbreedingCoeff=0.9982;MQ=63.70;MQ0=1;MQRankSum=-0.662;QD=41.24;ReadPosRankSum=2.359;VQSLOD=4.9951;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:60,0:60:99:0,169,3791	0/0:9,0:9:27.09:0,27,612	0/0:20,0:20:51.53:0,52,1111	0/0:24,0:20:54.18:0,54,1129	0/0:23,0:23:63.22:0,63,1425	0/0:21,0:21:60.21:0,60,1358	0/0:33,0:33:93.32:0,93,2106	0/0:34,0:34:99:0,102,2249	0/0:24,0:24:72.25:0,72,1629	0/0:35,0:35:99:0,102,2263	0/0:19,0:19:57.20:0,57,1282	0/0:28,0:28:78.25:0,78,1703	0/0:23,0:23:66.23:0,66,1482	0/0:21,0:21:57.20:0,57,1270	0/0:24,0:24:72.25:0,72,1628	0/0:22,0:22:63.22:0,63,1428	0/0:33,0:33:96.29:0,96,2062	0/0:19,0:19:51.18:0,51,1156	0/0:23,0:22:66.20:0,66,1411	0/0:28,0:28:78.27:0,78,1765	0/0:64,0:64:99:0,187,4204	0/0:21,0:21:60.21:0,60,1359	0/0:21,0:21:63.20:0,63,1362	0/0:29,0:28:87.30:0,87,1971	1/1:0,11:11:33.11:548,33,0	0/0:31,0:31:84.29:0,84,1901	0/0:28,0:28:84.29:0,84,1869	0/0:10,0:10:30.10:0,30,680
chr10	11536891	.	GCTAAC	G	23868.48	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=13.279;DP=603;FS=16.200;HRun=0;HaplotypeScore=129.6573;InbreedingCoeff=0.9950;MQ=88.41;MQ0=0;MQRankSum=-9.604;QD=58.36;ReadPosRankSum=4.972;VQSLOD=4.8611;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,39:40:99:2274,102,0	1/1:0,9:9:27.09:600,27,0	0/0:25,0:25:75.26:0,75,2265	0/0:26,0:26:65.77:0,66,1909	1/1:0,29:29:81.28:1788,81,0	0/0:16,0:16:48.16:0,48,1532	0/0:28,0:28:84.29:0,84,2668	1/1:3,14:17:39.13:869,39,0	1/1:1,26:27:75.26:1671,75,0	1/1:1,19:20:57.20:1270,57,0	1/1:0,19:19:54.19:1202,54,0	0/0:21,0:21:63.22:0,63,2009	0/0:21,0:21:60.21:0,60,1939	0/0:22,0:22:66.23:0,66,2125	1/1:1,14:15:36.12:801,36,0	1/1:0,19:19:45.15:1004,45,0	1/1:1,27:28:75.26:1672,75,0	1/1:0,23:23:60.21:1338,60,0	1/1:2,21:23:60.19:1295,60,0	1/1:2,14:16:39.13:869,39,0	1/1:1,23:24:60.21:1338,60,0	0/0:20,0:20:60.21:0,60,1832	1/1:0,19:19:57.20:1267,57,0	1/1:0,32:32:78.27:1738,78,0	0/0:15,0:15:45.15:0,45,1454	1/1:0,17:17:48.16:1070,48,0	1/1:3,24:27:69.24:1534,69,0	1/1:0,5:5:12.04:267,12,0
chr10	11537402	.	GCATGCA	G	4080.69	PASS	AB=1.000;AC=32;AF=0.571;AN=56;BaseQRankSum=12.456;DP=721;FS=5.280;HRun=0;HaplotypeScore=251.8376;InbreedingCoeff=0.6527;MQ=54.08;MQ0=10;MQRankSum=-9.941;QD=10.68;ReadPosRankSum=1.045;VQSLOD=2.2828;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:40,0:40:3.01:44,3,0	1/1:8,1:9:6.01:62,6,0	0/0:29,0:12:22.88:0,23,577	0/0:54,0:20:32.75:0,33,444	0/0:20,0:19:2.56:0,3,24	0/0:25,0:25:65.66:0,66,1937	0/0:48,0:48:75.71:0,76,2525	0/1:18,0:17:43.37:215,0,43	1/1:29,0:29:5.79:344,6,0	1/1:22,0:23:38.36:527,38,0	0/1:15,0:15:11.22:69,0,11	0/0:43,0:43:99:0,120,3395	0/0:25,0:25:59.22:0,59,1491	0/0:26,0:26:36.56:0,37,1064	1/1:19,1:20:15.05:205,15,0	1/1:14,0:14:6.02:84,6,0	1/1:17,2:19:4.09:46,4,0	1/1:15,0:15:11.48:146,11,0	1/1:26,0:25:44.66:586,45,0	0/0:20,0:20:0.01:0,0,1	1/1:37,1:36:2.96:19,3,0	0/0:19,0:19:42.11:0,42,1296	1/1:20,0:20:9.50:131,10,0	1/1:29,0:29:2.46:44,2,0	0/0:29,0:30:14.94:0,15,1816	1/1:28,1:29:39.10:742,39,0	1/1:25,1:26:41.83:509,42,0	1/1:12,0:12:20.42:308,20,0
chr10	11537409	.	CGTGCATGCGT	C	8578.27	PASS	AB=0.537;AC=35;AF=0.648;AN=54;BaseQRankSum=11.196;DP=705;FS=18.602;HRun=0;HaplotypeScore=252.5888;InbreedingCoeff=0.7483;MQ=52.90;MQ0=12;MQRankSum=-10.081;QD=23.31;ReadPosRankSum=2.214;VQSLOD=2.5624;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:1,37:38:3.01:97,3,0	1/1:1,8:9:6.02:145,6,0	0/0:26,0:10:20.46:0,20,274	0/0:51,0:17:16.22:0,16,188	0/1:3,19:21:0.09:0,0,0	0/0:25,0:25:56.86:0,57,1404	0/0:51,0:51:69.89:0,70,1738	1/1:20,0:16:33.11:506,33,0	1/1:3,24:27:24.08:775,24,0	1/1:3,17:20:42.14:947,42,0	1/1:1,14:15:5.61:197,6,0	0/0:43,0:43:96.28:0,96,2153	0/0:26,0:26:1.84:0,2,898	0/0:25,0:25:33.53:0,34,675	1/1:3,18:21:15.05:493,15,0	1/1:2,12:14:6.02:198,6,0	1/1:4,19:23:0.88:84,1,0	1/1:1,12:13:9.92:288,10,0	1/1:3,18:20:54.18:1046,54,0	1/1:2,16:18:3.91:22,4,0	./.	0/0:20,0:20:33.09:0,33,734	1/1:1,17:18:9.50:296,10,0	1/1:1,26:27:3.20:99,3,0	0/0:29,0:28:6.36:0,6,1288	1/1:5,24:28:66.57:1682,67,0	1/1:1,20:21:35.69:1063,36,0	1/1:3,9:12:21.07:640,21,0
chr10	11537412	.	GCA	G	3496.26	PASS	AB=1.000;AC=34;AF=0.630;AN=54;BaseQRankSum=11.957;DP=669;FS=17.442;HRun=0;HaplotypeScore=210.9872;InbreedingCoeff=0.7348;MQ=52.19;MQ0=15;MQRankSum=-9.421;QD=10.13;ReadPosRankSum=3.341;VQSLOD=1.8530;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:37,0:37:2.84:24,3,0	1/1:9,0:9:5.99:69,6,0	0/0:24,0:9:21.02:0,21,307	0/0:49,0:15:10.74:0,11,211	0/1:20,0:19:0:0,0,0	0/0:26,0:26:57.04:0,57,1071	0/0:51,0:51:81.88:0,82,1503	1/1:6,12:13:18.01:425,18,0	1/1:26,0:25:23.92:201,24,0	1/1:18,0:18:41.46:482,41,0	1/1:14,0:14:5.97:46,6,0	0/0:41,0:41:99:0,108,1861	0/0:24,0:24:49.38:0,49,794	0/0:25,0:25:30.57:0,31,569	1/1:20,0:19:14.94:116,15,0	1/1:12,0:12:5.98:46,6,0	1/1:22,0:22:2.56:47,3,0	0/1:13,0:13:8.04:61,0,8	1/1:19,0:18:53.86:745,54,0	1/1:17,0:18:2.97:20,3,0	./.	0/0:18,0:18:33.10:0,33,650	1/1:17,0:17:8.97:69,9,0	1/1:26,0:26:2.44:23,2,0	0/0:28,0:27:50.95:0,51,904	1/1:26,0:25:62.77:624,63,0	1/1:21,0:21:34.95:309,35,0	1/1:9,0:9:20.94:187,21,0
chr10	11537414	.	ATG	A	1210.23	PASS	AB=0.983;AC=35;AF=0.648;AN=54;BaseQRankSum=12.199;DP=670;FS=12.760;HRun=0;HaplotypeScore=217.7291;InbreedingCoeff=0.6312;MQ=52.23;MQ0=15;MQRankSum=-8.957;QD=2.88;ReadPosRankSum=3.767;VQSLOD=1.3838;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:37,0:37:2.80:19,3,0	1/1:8,0:9:5.39:23,5,0	0/0:24,0:8:11.93:0,12,124	0/1:48,0:14:4.96:5,0,105	0/1:20,0:19:0:0,0,0	0/0:26,0:26:52.76:0,53,694	0/0:54,0:54:81.38:0,81,1076	1/1:17,1:13:27.35:132,27,0	1/1:26,0:25:22.94:125,23,0	1/1:18,0:18:32.62:138,33,0	1/1:14,0:14:5.58:29,6,0	0/0:41,0:41:99:0,104,1145	0/0:25,0:25:23.98:0,24,518	0/0:26,0:26:13.12:0,13,391	1/1:19,1:19:14.27:74,14,0	1/1:12,0:12:5.69:30,6,0	0/1:20,2:22:0.46:8,0,0	1/1:12,0:12:8.30:51,8,0	1/1:19,0:18:41.75:165,42,0	0/1:18,0:18:0:0,0,0	./.	0/0:18,0:18:33.04:0,33,457	1/1:17,0:17:8.59:45,9,0	1/1:26,0:26:2.33:14,2,0	0/1:28,0:27:27.84:28,0,99	1/1:26,0:25:48.05:251,48,0	1/1:20,0:21:29.53:155,30,0	1/1:9,0:9:19.96:102,20,0
chr10	11537445	.	TGTGTGTGCGC	T	1945.39	PASS	AB=0.988;AC=23;AF=0.411;AN=56;BaseQRankSum=8.799;DP=650;FS=0.470;HRun=0;HaplotypeScore=297.8016;InbreedingCoeff=-0.1546;MQ=49.01;MQ0=10;MQRankSum=-7.853;QD=4.28;ReadPosRankSum=7.848;VQSLOD=1.0646;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:39,0:39:8.62:9,0,272	0/0:10,0:10:6.91:0,7,233	1/1:5,0:3:5.70:30,6,0	0/0:6,0:2:1.25:0,1,3	0/0:21,0:20:15.05:0,15,266	0/0:16,1:17:7.21:0,7,171	0/1:47,1:48:34.23:129,0,34	0/0:31,0:27:77.59:0,78,1343	0/1:30,0:29:83.09:83,0,233	0/1:23,0:23:0.94:1,0,558	0/1:14,0:14:24.05:24,0,100	0/1:32,4:36:25.11:902,0,25	1/1:20,2:21:1.92:401,2,0	1/1:27,0:27:9.02:99,9,0	0/1:23,0:22:38.64:39,0,183	0/1:14,0:14:8.58:9,0,171	0/0:30,0:30:17.16:0,17,494	0/1:16,0:16:3.63:4,0,214	0/0:20,0:20:1.67:0,2,198	0/0:18,0:18:14.40:0,14,289	0/0:42,0:40:16.30:0,16,254	0/1:15,1:16:18.95:35,0,19	0/1:20,0:20:31.19:31,0,154	0/1:30,0:30:2.96:3,0,193	0/1:28,0:27:48.07:48,0,571	0/1:35,0:34:99:119,0,645	1/1:18,0:18:15.21:108,15,0	0/1:11,0:11:32.37:32,0,230
chr10	11537447	.	TGTGTGCGC	T	3670.73	PASS	AB=1.000;AC=27;AF=0.482;AN=56;BaseQRankSum=6.720;DP=637;FS=0.446;HRun=0;HaplotypeScore=278.8205;InbreedingCoeff=-0.0496;MQ=51.53;MQ0=8;MQRankSum=-8.797;QD=8.30;ReadPosRankSum=7.550;VQSLOD=1.5957;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:4.34:0,4,309	0/0:10,0:10:2.60:0,3,221	1/1:5,0:3:5.70:30,6,0	0/0:5,0:3:1.25:0,1,3	0/0:20,0:19:15.05:0,15,243	0/1:17,0:17:66.35:66,0,84	1/1:46,2:48:2.62:199,3,0	0/0:32,0:28:77.61:0,78,1270	0/1:29,0:28:99:120,0,174	0/1:23,0:23:57.69:58,0,488	0/1:14,0:14:30.71:31,0,100	1/1:25,8:33:77.33:1482,77,0	1/1:5,15:19:24.04:634,24,0	1/1:0,27:27:9.03:237,9,0	0/1:23,0:23:55.86:56,0,267	0/1:13,0:13:16.67:17,0,185	0/0:30,0:30:25.57:0,26,531	0/1:15,0:15:20.13:20,0,250	0/1:18,0:18:44.25:44,0,131	0/0:19,0:19:17.44:0,17,310	0/0:40,0:39:18.95:0,19,291	1/1:3,13:16:3.01:87,3,0	0/1:19,0:19:40.59:41,0,154	0/1:32,0:32:3.32:3,0,231	0/1:26,0:25:88.92:89,0,220	0/1:35,0:34:99:195,0,547	1/1:18,0:18:23.78:178,24,0	0/1:11,0:11:84.73:85,0,169
chr10	11537449	.	TGTGCGC	T	2433.51	PASS	AB=0.776;AC=14;AF=0.250;AN=56;BaseQRankSum=-0.998;DP=625;FS=2.479;HRun=0;HaplotypeScore=269.2858;InbreedingCoeff=0.6411;MQ=51.86;MQ0=8;MQRankSum=-5.237;QD=13.08;ReadPosRankSum=0.560;VQSLOD=2.8547;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:13.94:0,14,326	0/0:10,0:10:14.84:0,15,204	1/1:4,0:3:5.70:30,6,0	0/0:4,0:3:1.25:0,1,3	0/0:20,0:19:15.05:0,15,242	0/1:3,13:16:36.55:207,0,37	1/1:5,43:48:22.43:438,22,0	0/0:32,0:28:78.78:0,79,1094	0/0:29,0:28:10.16:0,10,273	0/0:21,0:21:45.78:0,46,550	0/0:13,0:13:7.85:0,8,118	1/1:31,0:31:74.90:977,75,0	1/1:18,1:18:24.08:420,24,0	1/1:27,0:27:9.03:135,9,0	0/0:21,0:21:27.17:0,27,316	0/0:13,0:13:17.79:0,18,228	0/0:32,0:32:35.35:0,35,592	0/0:15,0:15:13.02:0,13,294	0/0:20,0:20:21.79:0,22,255	0/0:19,0:19:17.18:0,17,272	0/0:40,0:39:24.55:0,25,387	1/1:14,0:15:3.01:54,3,0	0/0:18,0:18:15.77:0,16,187	0/0:32,0:32:20.91:0,21,299	0/1:26,0:25:50.98:346,0,51	0/0:34,0:33:0.47:0,0,614	0/0:18,0:18:14.83:0,15,79	0/0:10,0:10:22.47:0,22,197
chr10	11537451	.	TGCGCGC	T	1761.86	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=0.253;DP=628;FS=2.746;HRun=0;HaplotypeScore=274.7657;InbreedingCoeff=0.8031;MQ=53.84;MQ0=8;MQRankSum=-5.643;QD=9.68;ReadPosRankSum=1.504;VQSLOD=2.6152;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:24.08:0,24,508	0/0:10,0:10:15.05:0,15,303	1/1:4,0:3:5.74:36,6,0	0/0:6,0:5:2.37:0,2,8	0/0:20,0:19:18.06:0,18,436	0/1:15,0:15:31.78:165,0,32	1/1:47,1:48:15.47:301,15,0	0/0:33,0:29:78.13:0,78,1611	0/0:29,0:28:26.88:0,27,566	0/0:23,0:23:56.87:0,57,1005	0/0:13,0:13:14.77:0,15,202	1/1:29,0:30:51.27:556,51,0	1/1:19,0:18:24.08:316,24,0	1/1:27,0:27:9:85,9,0	0/0:21,0:21:32.72:0,33,530	0/0:14,0:14:23.78:0,24,435	0/0:32,0:32:39.13:0,39,893	0/0:15,0:15:26.42:0,26,487	0/0:20,0:20:35.01:0,35,446	0/0:19,0:19:17.19:0,17,388	0/0:41,0:40:27.09:0,27,654	1/1:15,0:15:3.01:35,3,0	0/0:16,0:16:20.53:0,21,309	0/0:33,0:33:27.82:0,28,529	1/1:8,14:23:21.07:452,21,0	0/0:35,0:34:57.47:0,57,1144	0/0:18,0:18:29.01:0,29,230	0/0:10,0:10:26.92:0,27,353
chr10	11537767	.	A	AAAAC	19184.85	PASS	AB=0.629;AC=36;AF=0.643;AN=56;BaseQRankSum=-12.887;DP=746;FS=0.806;HRun=0;HaplotypeScore=115.9180;InbreedingCoeff=0.7062;MQ=69.96;MQ0=4;MQRankSum=-2.078;QD=35.59;ReadPosRankSum=1.608;VQSLOD=5.0427;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:16,31:48:78.27:1884,78,0	1/1:5,4:10:15.01:275,15,0	0/0:34,0:27:12.37:0,12,454	0/0:31,0:27:33.06:0,33,445	0/1:12,19:31:44.95:994,0,45	0/0:21,0:21:48.16:0,48,776	0/0:31,0:31:62.57:0,63,956	1/1:16,7:26:36.10:706,36,0	1/1:8,11:20:33.11:789,33,0	1/1:12,17:28:45.12:931,45,0	1/1:6,7:13:21.03:454,21,0	0/0:19,0:19:42.12:0,42,634	0/0:18,0:18:36.11:0,36,560	0/0:35,0:35:72.23:0,72,1138	1/1:7,23:30:69.24:1668,69,0	1/1:10,21:33:60.20:1450,60,0	0/1:12,17:29:3.36:969,0,3	1/1:9,17:28:39.13:942,39,0	1/1:10,6:19:26.99:516,27,0	1/1:7,9:18:30.92:631,31,0	1/1:13,24:38:60.16:1397,60,0	0/0:18,0:18:39.09:0,39,602	0/1:9,12:21:17.96:518,0,18	1/1:11,22:35:54.18:1305,54,0	0/1:11,13:26:10.66:559,0,11	1/1:15,19:36:63.20:1386,63,0	1/1:9,23:31:63.22:1522,63,0	1/1:7,5:12:12.04:289,12,0
chr10	11538090	.	T	TACACACAC	7122.46	PASS	AB=0.783;AC=43;AF=0.796;AN=54;BaseQRankSum=-1.377;DP=576;FS=5.283;HRun=0;HaplotypeScore=167.8676;InbreedingCoeff=0.5475;MQ=56.79;MQ0=14;MQRankSum=-5.174;QD=17.04;ReadPosRankSum=-1.254;VQSLOD=3.9044;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:36,0:36:12.03:307,12,0	./.	0/0:38,0:8:3.01:0,3,47	0/0:44,0:16:5.03:0,5,79	1/1:10,5:16:2.60:119,3,0	0/0:25,0:25:33.98:0,34,723	0/0:22,0:27:27.09:0,27,633	1/1:17,0:17:12.04:298,12,0	1/1:10,7:20:21.07:736,21,0	1/1:16,3:20:27.05:601,27,0	1/1:7,3:10:2.97:20,3,0	1/1:13,0:13:5.63:138,6,0	1/1:14,0:14:12:226,12,0	1/1:18,1:28:9.01:313,9,0	1/1:9,6:17:18.06:739,18,0	0/1:13,3:18:6.89:238,0,7	1/1:20,0:23:15.05:534,15,0	1/1:15,1:19:9.03:276,9,0	1/1:24,0:22:11.25:270,11,0	1/1:18,0:18:3.01:74,3,0	1/1:16,0:16:2.98:44,3,0	1/1:14,1:15:2.62:123,3,0	1/1:15,0:15:7.99:132,8,0	1/1:13,2:19:6.02:187,6,0	0/0:21,0:21:34:0,34,760	1/1:15,4:19:18.06:516,18,0	1/1:19,7:28:36.12:1169,36,0	1/1:6,0:10:2.53:64,3,0
chr10	11539275	.	T	TAA	5189.45	PASS	AB=0.693;AC=47;AF=0.839;AN=56;BaseQRankSum=-1.817;DP=555;FS=7.905;HRun=16;HaplotypeScore=85.7744;InbreedingCoeff=0.0231;MQ=77.95;MQ0=3;MQRankSum=-1.274;QD=10.00;ReadPosRankSum=1.158;VQSLOD=3.3326;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:9,16:29:13.84:109,14,0	0/1:2,4:7:4.98:117,0,5	0/0:36,0:15:5.07:0,5,28	0/1:30,0:20:12.60:31,0,13	1/1:9,18:29:55.40:460,55,0	0/1:6,1:22:4.30:62,0,4	0/1:10,0:20:7.42:28,0,7	1/1:9,15:25:46.77:489,47,0	1/1:6,13:21:28.77:288,29,0	1/1:11,6:19:25.73:236,26,0	1/1:11,12:24:38.40:353,38,0	0/1:11,0:14:3.23:73,0,3	0/1:10,0:22:6.80:37,0,7	0/1:3,2:16:6.27:83,0,6	1/1:5,9:17:22.91:223,23,0	1/1:12,0:12:1.08:150,1,0	1/1:5,7:13:14.41:156,14,0	1/1:7,4:25:18.84:217,19,0	1/1:8,10:21:16.17:327,16,0	1/1:5,10:19:31.59:260,32,0	1/1:2,11:16:6.01:65,6,0	1/1:4,1:13:10.25:63,10,0	1/1:3,12:16:21.40:208,21,0	1/1:2,6:13:13.77:127,14,0	1/1:9,8:20:0.93:172,1,0	1/1:5,4:20:35.65:315,36,0	1/1:4,20:23:30.09:367,30,0	1/1:3,5:11:17.41:175,17,0
chr10	11539701	.	GTTTTT	G	13413.87	PASS	AB=0.587;AC=37;AF=0.661;AN=56;BaseQRankSum=-7.033;DP=587;FS=1.917;HRun=13;HaplotypeScore=124.3416;InbreedingCoeff=0.9089;MQ=60.97;MQ0=5;MQRankSum=-1.631;QD=31.20;ReadPosRankSum=3.243;VQSLOD=3.6103;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:8,19:27:47.86:475,0,48	1/1:1,10:11:18.04:299,18,0	0/0:14,0:11:24.08:0,24,406	0/0:14,0:10:9.71:0,10,195	1/1:2,23:25:57.04:889,57,0	0/0:6,0:17:24.08:0,24,553	0/0:4,0:23:57.16:0,57,1250	1/1:14,22:36:62.90:971,63,0	1/1:1,19:20:39.09:668,39,0	1/1:2,28:30:78.20:1320,78,0	1/1:4,20:24:47.91:721,48,0	0/0:2,0:20:28.49:0,28,169	0/0:1,0:17:24.11:0,24,100	0/0:2,0:22:32.58:0,33,178	1/1:1,19:19:36.11:610,36,0	1/1:3,20:23:54.16:925,54,0	1/1:3,21:24:44.93:770,45,0	1/1:3,17:19:33.10:565,33,0	1/1:8,17:22:48.10:772,48,0	1/1:1,19:21:44.47:728,44,0	1/1:5,17:22:23.95:411,24,0	0/0:3,0:12:28.04:0,28,181	1/1:3,16:18:29.78:505,30,0	1/1:4,13:16:24.05:411,24,0	0/0:13,0:16:45.15:0,45,1183	1/1:5,19:24:57.06:885,57,0	1/1:3,24:27:63.16:1079,63,0	1/1:2,13:15:24.03:411,24,0
chr10	11540257	.	C	CG	12872.44	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=13.164;DP=471;FS=0.000;HRun=2;HaplotypeScore=74.9435;InbreedingCoeff=0.9728;MQ=68.41;MQ0=0;MQRankSum=-2.188;QD=37.10;ReadPosRankSum=-0.931;VQSLOD=4.9275;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,18:18:45.15:644,45,0	1/1:2,8:10:24.05:323,24,0	0/0:4,0:4:8.98:0,9,83	0/0:6,0:6:12.01:0,12,121	1/1:0,10:10:24.08:345,24,0	0/0:8,0:8:24.08:0,24,297	0/0:24,0:24:72.21:0,72,879	1/1:2,10:12:30.04:390,30,0	1/1:0,13:13:30.10:431,30,0	1/1:1,16:17:48.16:689,48,0	1/1:2,10:12:30.10:431,30,0	0/0:32,0:32:93.29:0,93,1152	0/0:7,0:7:21.07:0,21,259	0/0:16,0:16:42.13:0,42,520	1/1:0,7:7:18.06:259,18,0	1/1:0,9:9:27.09:389,27,0	1/1:4,27:31:75.25:1079,75,0	1/1:0,33:33:99:1425,99,0	1/1:2,16:18:44.74:625,45,0	1/1:1,7:8:15.05:216,15,0	1/1:2,63:65:99:2501,175,0	0/0:13,0:13:36.11:0,36,446	1/1:0,8:8:15.05:216,15,0	1/1:1,42:43:99:1640,114,0	0/0:14,0:14:36.11:0,36,445	1/1:2,16:18:48.15:667,48,0	1/1:0,11:11:30.10:431,30,0	1/1:0,4:4:12.04:172,12,0
chr10	11541161	.	T	TCAAAAAAAAA	10048.55	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-0.442;DP=596;FS=1.002;HRun=0;HaplotypeScore=168.6060;InbreedingCoeff=0.9968;MQ=86.01;MQ0=0;MQRankSum=-12.820;QD=96.62;ReadPosRankSum=-1.428;VQSLOD=4.7226;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,147,4628	0/0:14,0:14:39.13:0,39,1186	0/0:29,0:29:78.01:0,78,1721	0/0:15,0:15:33.39:0,33,463	0/0:24,0:24:72.22:0,72,2099	1/1:5,15:25:51.18:2643,51,0	1/1:4,9:17:30.10:1601,30,0	0/0:47,0:47:99:0,129,3649	0/0:19,0:19:51.16:0,51,1554	0/0:22,0:22:63.22:0,63,1988	0/0:22,0:22:66.21:0,66,2024	1/1:4,10:15:24.05:1076,24,0	1/1:2,7:10:23.41:1286,23,0	1/1:4,6:11:21.07:1049,21,0	0/0:24,0:24:72.24:0,72,2137	0/0:16,0:16:48.14:0,48,1424	0/0:23,0:23:63.18:0,63,1921	0/0:12,0:12:33.10:0,33,974	0/0:20,0:20:57.16:0,57,1524	0/0:17,0:17:48.14:0,48,1331	0/0:9,0:9:24.08:0,24,755	1/1:9,11:26:54.61:2393,55,0	0/0:20,0:20:57.18:0,57,1699	0/0:20,0:20:57.20:0,57,1807	0/0:27,0:27:81.24:0,81,2443	0/0:28,0:28:84.28:0,84,2597	0/0:26,0:26:78.25:0,78,2408	0/0:7,0:7:21.07:0,21,642
chr10	11545232	.	AT	A	795.04	PASS	AB=0.784;AC=36;AF=0.643;AN=56;BaseQRankSum=1.115;DP=335;FS=7.343;HRun=17;HaplotypeScore=59.3842;InbreedingCoeff=0.2394;MQ=71.04;MQ0=5;MQRankSum=-0.259;QD=3.09;ReadPosRankSum=2.137;VQSLOD=-0.6971;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,5:12:13.67:72,14,0	1/1:1,2:3:2.92:17,3,0	0/0:24,0:11:2.51:0,3,25	0/0:14,0:12:14.66:0,15,94	1/1:12,4:17:17.98:83,18,0	0/1:7,1:9:4.94:5,0,50	0/1:8,1:9:13.56:14,0,50	1/1:7,0:12:11.36:32,11,0	0/1:6,0:6:14.83:17,0,15	1/1:5,5:13:20.22:90,20,0	1/1:8,5:12:4.87:29,5,0	0/0:12,0:11:5.71:0,6,32	0/0:8,1:10:3.76:0,4,93	0/0:8,0:8:1.32:0,1,85	1/1:0,2:3:7.89:39,8,0	0/1:3,6:10:0.21:77,0,0	1/1:8,7:13:18.65:113,19,0	1/1:4,0:7:6.08:17,6,0	1/1:10,0:12:5.71:17,6,0	1/1:7,0:18:19.28:55,19,0	1/1:9,0:11:1.39:5,1,0	0/1:8,2:14:8.35:8,0,81	0/1:6,8:14:15.92:24,0,16	0/1:3,4:8:7.15:55,0,7	0/0:10,0:9:8.69:0,9,56	0/1:13,2:18:0.51:54,0,1	1/1:11,4:17:15.12:115,15,0	1/1:1,5:6:2.70:16,3,0
chr10	11545248	.	TTG	T	230.33	PASS	AB=0.966;AC=12;AF=0.214;AN=56;BaseQRankSum=0.745;DP=283;FS=12.434;HRun=0;HaplotypeScore=57.7481;InbreedingCoeff=-0.1707;MQ=54.87;MQ0=5;MQRankSum=-0.104;QD=1.90;ReadPosRankSum=0.163;VQSLOD=0.3688;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:8:2.32:0,2,21	0/0:3,0:3:3.41:0,3,19	0/0:15,0:3:5.18:0,5,27	0/0:8,0:6:14.69:0,15,111	0/1:15,0:13:32.09:37,0,32	0/0:13,0:12:14.06:0,14,204	0/0:9,0:9:4.71:0,5,90	0/1:10,0:10:7.11:7,0,59	0/1:4,1:4:24.84:25,0,40	1/1:9,1:10:3.50:88,3,0	0/1:9,0:7:17.44:17,0,23	0/0:11,0:9:13.85:0,14,81	0/0:10,0:10:21.50:0,21,176	0/0:9,0:9:17.64:0,18,132	0/0:4,0:4:3.46:0,3,20	0/1:12,0:12:39.26:39,0,68	0/1:15,0:11:12.57:13,0,50	0/0:6,0:5:1.05:0,1,17	0/0:10,0:8:5.99:0,6,67	0/0:21,0:19:4.54:0,5,126	0/0:8,0:7:1.33:0,1,56	0/0:10,0:10:17.32:0,17,173	0/1:12,0:11:6.22:6,0,74	0/1:10,0:10:2.42:2,0,65	0/0:8,0:8:4.69:0,5,99	0/1:9,0:7:5.71:61,0,6	0/1:11,3:14:26.83:68,0,27	0/0:7,0:7:13.19:0,13,76
chr10	11545817	.	G	GGAGCTTCATTCAAATATCCATGCTA	11690.59	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=4.097;DP=633;FS=5.628;HRun=0;HaplotypeScore=375.1592;InbreedingCoeff=0.9891;MQ=85.89;MQ0=0;MQRankSum=-10.874;QD=185.56;ReadPosRankSum=1.841;VQSLOD=4.0623;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,150,9090	0/0:7,0:7:21.07:0,21,1260	0/0:18,0:18:54.19:0,54,2384	0/0:28,0:28:78.27:0,78,3221	0/0:25,0:25:72.25:0,72,4361	0/0:23,0:23:69.24:0,69,3658	0/0:29,0:29:84.29:0,84,5342	0/0:29,0:29:87.29:0,87,4512	0/0:25,0:25:69.19:0,69,3405	0/0:25,0:25:72.24:0,72,4320	0/0:18,0:18:51.17:0,51,2747	1/1:9,3:18:33.11:3258,33,0	1/1:7,1:11:24.08:2029,24,0	1/1:11,3:17:36.12:3386,36,0	0/0:21,0:21:60.19:0,60,3743	0/0:10,0:10:30.10:0,30,1359	0/0:26,0:26:78.25:0,78,4507	0/0:9,0:9:27.09:0,27,1559	0/0:40,0:40:99:0,114,6438	0/0:22,0:22:66.23:0,66,4151	0/0:56,0:56:99:0,163,9409	1/1:14,2:17:39.05:3018,39,0	0/0:13,0:13:39.13:0,39,2028	0/0:36,0:36:99:0,102,6251	0/0:19,0:19:57.17:0,57,3059	0/0:22,0:22:63.21:0,63,3460	0/0:14,0:14:39.13:0,39,2371	0/0:4,0:4:12:0,12,465
chr10	11546449	.	TA	T	10369.58	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-0.589;DP=581;FS=4.907;HRun=10;HaplotypeScore=81.8340;InbreedingCoeff=0.9039;MQ=79.54;MQ0=1;MQRankSum=-5.482;QD=20.33;ReadPosRankSum=4.987;VQSLOD=5.5521;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,30:30:74.99:651,75,0	1/1:2,7:9:17.73:156,18,0	0/0:25,0:24:9.18:0,9,235	0/0:25,0:20:3.47:0,3,325	1/1:0,21:21:59.84:499,60,0	1/1:2,29:31:47.81:643,48,0	1/1:5,25:30:62.97:547,63,0	1/1:2,7:9:17.98:156,18,0	1/1:2,16:18:35.92:304,36,0	1/1:2,22:24:62.97:545,63,0	1/1:3,18:21:47.84:400,48,0	1/1:2,13:15:32.99:286,33,0	1/1:1,12:13:29.99:261,30,0	1/1:4,7:11:26.85:225,27,0	1/1:2,15:17:35.99:312,36,0	1/1:2,20:22:14.82:357,15,0	1/1:3,31:34:77.97:677,78,0	1/1:0,17:17:47.99:417,48,0	1/1:5,10:15:29.97:256,30,0	1/1:4,29:33:50.63:651,51,0	1/1:3,15:18:44.95:384,45,0	1/1:5,15:20:47.98:413,48,0	1/1:0,18:18:50.77:442,51,0	1/1:3,27:30:65.88:573,66,0	0/0:20,1:21:30.13:0,30,544	1/1:1,18:20:56.03:475,56,0	1/1:1,18:20:53.02:448,53,0	1/1:0,13:14:35.03:292,35,0
chr10	11551313	.	C	CT	411.33	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=-1.337;DP=529;FS=4.170;HRun=11;HaplotypeScore=60.4905;InbreedingCoeff=0.7297;MQ=69.24;MQ0=2;MQRankSum=1.705;QD=6.74;ReadPosRankSum=-0.125;VQSLOD=1.7281;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:56.29:0,56,551	0/0:9,0:9:26.89:0,27,207	0/1:25,0:16:30.65:31,0,58	0/0:18,0:15:4.79:0,5,82	0/0:34,0:34:89.62:0,90,694	1/1:3,15:18:20.64:265,21,0	1/1:3,14:17:24.05:244,24,0	0/0:25,0:26:52.77:0,53,398	0/0:18,0:18:50.81:0,51,395	0/0:22,0:22:53.78:0,54,416	0/0:19,0:19:41.82:0,42,325	0/0:12,0:12:35.86:0,36,278	0/0:12,0:13:25.90:0,26,191	0/0:18,0:18:47.80:0,48,369	0/0:15,0:15:41.83:0,42,325	0/0:14,0:16:36.93:0,37,267	0/0:33,0:34:72.49:0,72,620	0/0:24,0:24:59.76:0,60,464	0/0:15,0:14:24.35:0,24,187	0/0:17,0:17:47.79:0,48,368	0/0:12,0:12:29.88:0,30,232	0/0:7,0:7:20.91:0,21,160	0/0:13,0:13:34.91:0,35,261	0/0:7,0:8:19.96:0,20,145	0/0:19,0:19:47.78:0,48,371	0/0:28,0:28:74.70:0,75,580	0/0:23,0:23:62.74:0,63,485	0/0:16,0:16:47.77:0,48,365
chr10	11553873	.	CAA	C	3642.65	PASS	AB=0.949;AC=33;AF=0.589;AN=56;BaseQRankSum=-0.966;DP=419;FS=36.419;HRun=11;HaplotypeScore=115.9349;InbreedingCoeff=0.5384;MQ=39.93;MQ0=16;MQRankSum=-5.090;QD=11.28;ReadPosRankSum=3.316;VQSLOD=-0.3408;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:29,5:31:35.10:426,35,0	1/1:13,0:12:6.55:97,7,0	0/0:11,0:3:6.02:0,6,77	0/0:15,0:4:6.02:0,6,87	1/1:15,2:14:1.86:115,2,0	0/0:8,0:8:13.09:0,13,73	0/1:12,0:11:2.71:3,0,120	1/1:21,1:21:31.82:307,32,0	1/1:13,2:14:23.67:179,24,0	0/1:13,2:14:10.10:188,0,10	0/1:16,0:14:0.94:170,0,1	0/0:11,0:10:22.92:0,23,171	0/0:13,0:11:16.30:0,16,113	0/0:3,0:3:3.46:0,3,24	1/1:15,0:15:12.96:148,13,0	1/1:21,1:21:37.10:262,37,0	1/1:8,3:9:20.26:171,20,0	1/1:11,4:15:11.35:195,11,0	1/1:25,0:24:36.55:418,37,0	1/1:13,0:12:3.01:127,3,0	0/0:7,0:5:3.41:0,3,19	0/0:7,0:7:8.90:0,9,59	0/1:16,3:18:6.58:104,0,7	0/1:14,0:14:8.44:169,0,8	0/0:20,0:20:57.19:0,57,846	1/1:26,1:26:25.17:342,25,0	1/1:10,1:11:15.20:152,15,0	1/1:5,1:6:8.75:70,9,0
chr10	11553881	.	A	ACC	10949.17	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-0.351;DP=405;FS=36.346;HRun=0;HaplotypeScore=101.3268;InbreedingCoeff=0.9440;MQ=40.22;MQ0=12;MQRankSum=-2.445;QD=34.98;ReadPosRankSum=1.283;VQSLOD=3.5336;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,22:30:69.11:1036,69,0	1/1:0,11:10:27.09:472,27,0	0/0:11,0:4:9.03:0,9,127	0/0:18,0:7:11.93:0,12,159	1/1:6,11:15:32.95:468,33,0	0/0:8,0:7:18.05:0,18,211	0/0:10,0:9:27.03:0,27,327	1/1:5,14:18:44.81:675,45,0	1/1:4,10:13:32.67:518,33,0	1/1:7,11:17:40.95:616,41,0	1/1:0,16:14:32.94:553,33,0	0/0:10,0:9:27.02:0,27,305	0/0:8,0:6:17.94:0,18,171	0/0:4,0:4:7.55:0,8,62	1/1:1,13:14:36.10:624,36,0	1/1:5,16:20:54.17:856,54,0	1/1:7,6:10:27:395,27,0	1/1:6,5:11:33.11:519,33,0	1/1:5,19:24:15.41:767,15,0	1/1:2,14:14:36.10:539,36,0	1/1:2,5:5:9.02:144,9,0	0/0:4,0:4:11.63:0,12,126	1/1:10,5:14:32.42:440,32,0	1/1:2,11:14:29.87:434,30,0	0/0:19,0:19:57.19:0,57,930	1/1:7,26:32:84.20:1266,84,0	1/1:3,7:10:30.04:472,30,0	1/1:3,4:7:9.03:154,9,0
chr10	11553900	.	AC	A	7046.37	PASS	AB=0.922;AC=46;AF=0.821;AN=56;BaseQRankSum=3.392;DP=442;FS=5.929;HRun=1;HaplotypeScore=113.9356;InbreedingCoeff=0.4766;MQ=50.47;MQ0=10;MQRankSum=-5.211;QD=18.59;ReadPosRankSum=1.034;VQSLOD=4.9905;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:22,10:29:22.76:371,23,0	1/1:6,7:12:24.20:318,24,0	0/0:20,0:14:42.07:0,42,517	0/0:26,0:12:30.09:0,30,404	1/1:4,12:14:18.91:326,19,0	1/1:8,2:9:19.10:144,19,0	1/1:6,10:15:15.58:205,16,0	1/1:4,19:22:39.33:523,39,0	1/1:13,4:17:35.64:405,36,0	1/1:10,13:22:32.42:478,32,0	1/1:5,8:11:2.04:178,2,0	0/1:10,0:9:7.63:69,0,8	0/1:8,0:6:20.38:22,0,20	1/1:4,0:4:7.82:59,8,0	1/1:3,17:20:34.27:445,34,0	1/1:9,12:20:56.40:598,56,0	1/1:7,6:11:20.14:272,20,0	1/1:6,4:10:5.96:160,6,0	1/1:13,11:24:4.87:488,5,0	1/1:5,9:12:20.55:300,21,0	1/1:4,7:9:2.99:186,3,0	0/1:2,0:2:0.95:13,0,1	1/1:6,7:12:18.35:253,18,0	0/1:6,5:11:2.35:78,0,2	0/0:17,0:17:51.17:0,51,742	1/1:11,17:27:21.56:633,22,0	1/1:6,14:20:33.82:385,34,0	1/1:1,6:7:12:137,12,0
chr10	11553901	.	C	CAAA	8866.05	PASS	AB=1.000;AC=49;AF=0.875;AN=56;BaseQRankSum=3.898;DP=451;FS=0.512;HRun=4;HaplotypeScore=130.2838;InbreedingCoeff=0.6679;MQ=50.82;MQ0=9;MQRankSum=-6.224;QD=22.91;ReadPosRankSum=0.214;VQSLOD=1.4386;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:18,14:29:44.05:526,44,0	1/1:13,0:12:22.94:341,23,0	0/0:20,0:14:42.08:0,42,526	0/0:27,0:13:30.09:0,30,409	1/1:16,0:14:29.45:437,29,0	1/1:12,0:11:4.88:62,5,0	1/1:16,0:15:5.71:138,6,0	1/1:24,0:23:52.23:654,52,0	1/1:18,0:17:39.75:521,40,0	1/1:23,0:22:30.25:590,30,0	1/1:13,0:11:10.88:243,11,0	1/1:10,0:9:9.42:83,9,0	0/1:8,0:6:8.26:26,0,8	1/1:5,0:5:8.59:63,9,0	1/1:20,0:20:33.05:522,33,0	1/1:20,0:20:57.13:813,57,0	1/1:13,0:11:27.04:320,27,0	1/1:10,0:10:13.42:238,13,0	1/1:24,0:24:51.61:621,52,0	1/1:15,0:13:28.36:448,28,0	1/1:11,0:9:9.42:247,9,0	1/1:2,0:2:3.31:15,3,0	1/1:12,1:12:19:355,19,0	1/1:12,0:12:5.70:184,6,0	0/0:17,0:17:51.04:0,51,688	1/1:28,0:27:39.08:845,39,0	1/1:20,0:21:40.83:430,41,0	1/1:8,0:8:12.02:145,12,0
chr10	11553905	.	AC	A	7838.42	PASS	AB=1.000;AC=49;AF=0.875;AN=56;BaseQRankSum=3.213;DP=444;FS=0.486;HRun=1;HaplotypeScore=112.0839;InbreedingCoeff=0.7517;MQ=52.72;MQ0=6;MQRankSum=-6.322;QD=20.52;ReadPosRankSum=-1.171;VQSLOD=4.5668;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:31,1:31:42.66:474,43,0	1/1:13,0:12:24.74:327,25,0	0/0:19,0:14:42.06:0,42,519	0/0:26,0:14:36.12:0,36,501	1/1:15,1:14:31.03:367,31,0	1/1:9,2:10:18.12:134,18,0	1/1:7,9:15:22.91:289,23,0	1/1:22,1:22:54.69:576,55,0	1/1:18,0:17:42.47:442,42,0	1/1:21,2:22:39.58:506,40,0	1/1:10,3:11:7.81:195,8,0	1/1:11,0:10:2.99:99,3,0	0/1:7,0:5:2.86:43,0,3	1/1:5,0:5:9.12:52,9,0	1/1:20,1:21:37.45:475,37,0	1/1:17,3:20:57.01:614,57,0	1/1:10,2:11:29.97:311,30,0	1/1:9,0:9:18.07:195,18,0	1/1:24,1:25:58.58:619,59,0	1/1:14,0:12:18.66:287,19,0	1/1:10,1:9:8.70:194,9,0	1/1:3,0:3:8.54:54,9,0	1/1:11,0:10:20.25:249,20,0	1/1:12,0:12:13.69:158,14,0	0/0:17,0:17:50.99:0,51,642	1/1:27,1:27:30.25:663,30,0	1/1:19,1:20:35.67:375,36,0	1/1:8,0:8:13.26:142,13,0
chr10	11556133	.	GA	G	833.85	PASS	AB=0.834;AC=16;AF=0.286;AN=56;BaseQRankSum=7.579;DP=476;FS=0.473;HRun=13;HaplotypeScore=81.5051;InbreedingCoeff=0.4198;MQ=58.96;MQ0=7;MQRankSum=-7.079;QD=4.58;ReadPosRankSum=1.928;VQSLOD=1.8260;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:19,3:20:25.80:26,0,228	0/1:10,2:13:20.58:21,0,175	0/0:17,0:9:2.65:0,3,96	0/0:11,0:4:5.62:0,6,27	0/0:18,1:22:26.08:0,26,280	1/1:3,0:11:18.32:53,18,0	1/1:5,0:15:18.30:53,18,0	0/0:15,1:17:4.28:0,4,227	0/0:13,0:13:23.95:0,24,215	0/0:22,1:23:9.50:0,10,251	0/1:14,1:15:6.88:7,0,102	1/1:5,11:15:29.79:218,30,0	0/1:4,8:10:2.12:133,0,2	1/1:3,17:18:43.89:313,44,0	0/0:18,0:17:29.40:0,29,264	0/0:11,1:11:29.96:0,30,275	0/0:32,2:35:21.20:0,21,535	0/0:16,1:18:13.29:0,13,307	0/0:12,1:13:9.21:0,9,220	0/1:16,1:16:0.82:1,0,150	0/0:8,0:8:14.98:0,15,136	1/1:6,12:18:0.63:167,1,0	0/1:17,4:21:13.36:13,0,195	0/0:22,3:25:38.02:0,38,513	0/0:17,2:19:14.11:0,14,289	0/0:20,0:21:14.19:0,14,169	0/0:14,0:13:29.62:0,30,244	0/0:6,0:4:8.98:0,9,79
chr10	11556149	.	CA	C	8752.87	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=0.558;DP=506;FS=3.643;HRun=10;HaplotypeScore=67.5741;InbreedingCoeff=0.8830;MQ=65.81;MQ0=1;MQRankSum=-2.705;QD=19.85;ReadPosRankSum=1.761;VQSLOD=5.9471;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,19:21:43.33:388,43,0	1/1:1,13:14:38.99:338,39,0	0/0:29,0:15:28.30:0,28,273	0/0:16,0:7:4.41:0,4,15	1/1:4,18:22:44.98:391,45,0	1/1:2,11:12:32.99:286,33,0	1/1:4,13:17:35.97:312,36,0	1/1:5,19:24:56.97:495,57,0	1/1:3,9:12:26.98:232,27,0	1/1:1,22:23:65.97:569,66,0	1/1:4,7:11:17.97:156,18,0	1/1:2,16:17:44.99:390,45,0	1/1:4,12:15:32.98:286,33,0	1/1:7,15:20:47.85:404,48,0	1/1:2,9:11:29.97:255,30,0	1/1:4,12:15:28.97:259,29,0	1/1:7,33:40:71.90:625,72,0	1/1:1,14:15:38.99:339,39,0	1/1:5,12:17:38.99:339,39,0	1/1:3,12:14:35.98:312,36,0	1/1:0,6:6:18:156,18,0	1/1:4,19:23:53.93:461,54,0	1/1:3,15:19:38.03:318,38,0	1/1:4,25:29:74.85:639,75,0	0/0:20,0:20:48.13:0,48,529	1/1:2,16:17:47.97:413,48,0	1/1:6,10:15:43.52:363,44,0	1/1:2,1:3:2.99:26,3,0
chr10	11558985	.	T	TA	15546.48	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-14.337;DP=612;FS=1.411;HRun=3;HaplotypeScore=55.8501;InbreedingCoeff=0.9984;MQ=73.45;MQ0=0;MQRankSum=-4.236;QD=38.20;ReadPosRankSum=2.021;VQSLOD=5.2087;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,35:38:99:1425,102,0	1/1:0,7:7:21.07:294,21,0	0/0:25,0:25:72.21:0,72,855	0/0:32,0:32:87.14:0,87,997	1/1:1,21:22:66.18:899,66,0	0/0:23,0:23:66.19:0,66,781	0/0:24,0:24:63.17:0,63,744	1/1:1,36:37:99:1496,111,0	1/1:0,17:18:51.13:682,51,0	1/1:3,17:20:54.18:752,54,0	1/1:0,7:7:21.07:294,21,0	0/0:26,0:26:78.24:0,78,936	0/0:19,0:19:51.14:0,51,598	0/0:24,0:24:66.19:0,66,779	1/1:1,22:23:66.22:924,66,0	1/1:0,18:18:45.15:630,45,0	1/1:2,28:30:81.27:1134,81,0	1/1:1,14:15:33.11:458,33,0	1/1:0,23:23:69.20:931,69,0	1/1:1,10:11:33.11:459,33,0	1/1:1,38:39:99:1428,102,0	0/0:19,0:19:54.16:0,54,647	1/1:0,13:13:32.87:462,33,0	1/1:2,41:43:99:1599,116,0	0/0:13,0:13:36.09:0,36,413	1/1:1,17:18:48.16:672,48,0	1/1:0,16:16:45.15:630,45,0	1/1:0,9:9:27.09:378,27,0
chr10	11558988	.	A	AC	5745.67	PASS	AB=1.000;AC=36;AF=0.643;AN=56;BaseQRankSum=12.861;DP=627;FS=1.764;HRun=2;HaplotypeScore=94.2390;InbreedingCoeff=0.8376;MQ=74.44;MQ0=0;MQRankSum=-5.282;QD=13.65;ReadPosRankSum=4.537;VQSLOD=4.3312;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:37,1:38:76.43:564,76,0	1/1:7,0:7:20.34:114,20,0	0/0:25,0:25:75.12:0,75,899	0/0:33,0:33:90.26:0,90,1078	1/1:21,1:22:62.19:383,62,0	0/0:23,0:23:63.20:0,63,780	0/0:24,0:24:72.19:0,72,855	1/1:38,0:39:48.94:471,49,0	1/1:20,0:20:26.15:232,26,0	1/1:20,2:22:27.88:267,28,0	1/1:7,0:7:20.35:115,20,0	0/0:27,0:27:78.24:0,78,961	0/0:19,0:19:54.14:0,54,638	0/0:22,0:22:63.20:0,63,780	1/1:22,0:22:63.76:359,64,0	1/1:18,0:18:43.69:252,44,0	1/1:30,0:30:78.65:452,79,0	0/1:17,0:17:22.68:151,0,23	1/1:25,0:25:19.65:277,20,0	1/1:11,1:12:10.99:227,11,0	1/1:42,0:42:54.63:519,55,0	0/0:20,0:20:57.15:0,57,688	1/1:13,0:13:31.91:179,32,0	1/1:41,0:41:99:622,110,0	0/0:13,0:13:30.09:0,30,372	1/1:18,0:18:22.59:229,23,0	1/1:17,0:17:22.77:222,23,0	0/1:11,0:11:16.46:109,0,16
chr10	11559312	.	C	CT	9083.29	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-5.469;DP=348;FS=0.000;HRun=7;HaplotypeScore=31.4130;InbreedingCoeff=0.7293;MQ=71.36;MQ0=0;MQRankSum=-3.551;QD=28.47;ReadPosRankSum=0.339;VQSLOD=4.5890;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,15:16:36.11:435,36,0	1/1:1,3:4:9.03:109,9,0	0/0:9,0:8:14.96:0,15,129	0/0:5,0:3:2.84:0,3,29	1/1:1,8:9:18.06:217,18,0	1/1:1,21:22:63.19:761,63,0	1/1:2,2:4:3.01:36,3,0	1/1:6,23:29:69.21:832,69,0	1/1:2,4:6:12.04:145,12,0	1/1:3,12:15:33.10:397,33,0	1/1:1,14:15:36.07:418,36,0	1/1:2,8:10:18.06:217,18,0	1/1:1,8:9:21.06:254,21,0	1/1:0,6:6:18.06:217,18,0	1/1:1,8:9:24.07:290,24,0	1/1:1,6:7:18.06:217,18,0	1/1:5,29:34:81.24:971,81,0	1/1:2,17:19:45.14:544,45,0	1/1:3,15:18:48.11:557,48,0	1/1:3,5:8:15.05:181,15,0	1/1:2,1:3:3.01:36,3,0	1/1:1,2:3:6.02:72,6,0	1/1:2,8:10:21.06:254,21,0	1/1:2,3:5:9.03:109,9,0	0/0:15,0:15:36.05:0,36,348	1/1:2,21:23:63.19:761,63,0	1/1:2,12:14:27.08:326,27,0	1/1:1,20:21:60.18:725,60,0
chr10	11559583	.	CGT	C	253.18	PASS	AB=0.912;AC=13;AF=0.283;AN=46;BaseQRankSum=-0.204;DP=498;FS=14.363;HRun=0;HaplotypeScore=80.7566;InbreedingCoeff=-0.2298;MQ=57.13;MQ0=14;MQRankSum=0.264;QD=1.37;ReadPosRankSum=-0.378;VQSLOD=0.6266;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:21.43:0,21,208	1/1:6,0:6:5.04:38,5,0	0/0:35,0:18:0:0,0,0	./.	0/1:14,1:15:23.52:24,0,119	./.	./.	0/0:23,0:22:5.89:0,6,37	0/1:10,2:12:43.38:43,0,113	0/0:18,0:16:8.95:0,9,88	0/1:7,2:9:21.76:35,0,22	0/1:17,0:16:12.17:12,0,117	0/0:14,0:14:16.59:0,17,155	./.	0/1:15,2:17:5.54:6,0,242	0/1:14,1:15:19.52:20,0,172	0/1:22,2:24:46.98:47,0,136	0/1:27,1:28:40.35:40,0,285	0/0:21,0:19:11.99:0,12,118	./.	0/0:15,0:14:2.99:0,3,24	0/0:12,0:13:11.41:0,11,141	0/1:10,1:12:12.06:12,0,111	0/0:28,0:32:17.64:0,18,128	0/0:10,0:10:8.96:0,9,107	0/0:22,0:22:17.87:0,18,131	0/1:12,5:16:48.19:48,0,77	0/1:13,0:13:15.74:63,0,16
chr10	11559630	.	G	GAC	1424.07	PASS	AB=0.976;AC=20;AF=0.357;AN=56;BaseQRankSum=5.768;DP=430;FS=39.091;HRun=0;HaplotypeScore=99.9133;InbreedingCoeff=-0.4478;MQ=46.10;MQ0=21;MQRankSum=1.324;QD=4.44;ReadPosRankSum=-1.449;VQSLOD=0.9349;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:24,10:32:21.97:22,0,220	0/1:9,0:9:34.98:35,0,46	0/0:3,0:1:2.98:0,3,22	0/0:9,0:6:9:0,9,94	0/0:9,11:20:18.03:0,18,226	0/0:16,0:16:9.03:0,9,128	0/0:15,0:15:11.95:0,12,129	0/1:20,0:13:17.02:161,0,17	0/1:14,0:14:63.90:64,0,163	0/1:15,0:14:99:216,0,164	0/1:16,0:16:92.56:116,0,93	0/1:11,0:11:4.61:5,0,102	0/0:12,0:12:0.56:0,1,82	0/1:4,0:3:0:0,0,0	0/1:22,0:22:99:136,0,258	0/1:11,0:13:9.37:9,0,253	0/1:27,0:27:99:237,0,180	0/1:24,0:22:59.54:60,0,365	0/1:9,0:8:61.33:76,0,61	0/1:7,0:5:29.91:59,0,30	0/0:20,0:13:6.02:0,6,80	0/1:15,0:14:50.12:61,0,50	0/1:13,0:13:34.16:34,0,101	1/1:36,0:35:0.32:11,0,0	0/0:10,0:9:21.07:0,21,305	0/1:12,0:11:99:138,0,155	0/1:18,0:17:99:132,0,119	0/0:4,0:4:8.75:0,9,79
chr10	11559632	.	G	GAC	619.22	PASS	AB=0.984;AC=16;AF=0.286;AN=56;BaseQRankSum=7.846;DP=440;FS=47.057;HRun=0;HaplotypeScore=104.5146;InbreedingCoeff=-0.2631;MQ=49.30;MQ0=19;MQRankSum=1.346;QD=2.44;ReadPosRankSum=2.926;VQSLOD=-0.1875;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:34,1:33:17.14:17,0,197	0/0:9,0:9:17.09:0,17,116	0/0:4,0:2:2.90:0,3,16	0/0:12,0:8:15.01:0,15,159	0/0:20,0:20:14.71:0,15,176	0/0:15,0:15:9.03:0,9,127	0/0:15,0:15:11.95:0,12,129	0/0:24,0:17:6.75:0,7,106	0/1:13,0:13:51.85:52,0,97	0/1:13,0:12:99:117,0,170	0/1:12,3:15:68.42:89,0,68	0/0:12,0:12:22.32:0,22,145	0/0:13,0:13:9.44:0,9,104	0/1:4,0:3:0:0,0,0	0/1:22,0:22:99:107,0,243	0/0:16,0:14:11.12:0,11,264	0/1:28,1:29:99:137,0,168	0/1:24,0:22:44.41:44,0,297	0/1:10,0:10:4.44:4,0,95	0/1:6,0:5:27.68:28,0,39	0/0:19,0:12:6.02:0,6,79	0/0:15,0:14:18.16:0,18,115	0/1:13,0:13:31.41:31,0,75	1/1:36,0:35:0.32:11,0,0	0/0:12,0:11:24.06:0,24,326	0/1:12,0:11:63.31:63,0,160	0/1:18,0:17:53.48:53,0,90	0/1:4,0:4:10.81:11,0,37
chr10	11559634	.	G	GAC	921.52	PASS	AB=0.964;AC=16;AF=0.286;AN=56;BaseQRankSum=5.843;DP=438;FS=42.479;HRun=0;HaplotypeScore=101.9148;InbreedingCoeff=-0.2370;MQ=50.81;MQ0=20;MQRankSum=1.264;QD=3.63;ReadPosRankSum=2.089;VQSLOD=0.7106;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:30,1:29:19.16:19,0,150	0/0:9,0:9:17.61:0,18,120	0/0:7,0:3:5.75:0,6,42	0/0:13,0:9:17.96:0,18,171	0/0:18,1:19:11.88:0,12,86	0/0:15,0:15:9.03:0,9,127	0/0:15,0:15:11.95:0,12,129	0/0:23,0:17:21.49:0,21,123	0/1:11,0:11:33.49:99,0,33	0/1:13,0:12:72.61:123,0,73	0/1:16,0:16:27.31:115,0,27	0/0:12,0:12:16.79:0,17,122	0/0:13,0:13:9.06:0,9,110	0/1:4,0:3:0:0,0,0	0/1:21,0:21:92.62:146,0,93	0/1:17,0:15:18.57:19,0,99	0/1:29,0:29:76.86:180,0,77	0/1:18,4:21:99:102,0,125	0/0:11,0:11:16.78:0,17,126	0/1:6,0:5:29.20:29,0,45	0/0:19,0:12:6.02:0,6,80	0/0:16,0:15:22.09:0,22,148	0/1:12,1:13:45.02:63,0,45	1/1:36,0:35:1.76:23,2,0	0/0:12,0:11:27.06:0,27,355	0/1:12,0:11:80.05:80,0,99	0/1:20,0:19:69.35:69,0,89	0/1:2,1:3:2.32:2,0,19
chr10	11559636	.	G	GACAGAGAC	5419.98	PASS	AB=0.967;AC=26;AF=0.464;AN=56;BaseQRankSum=-5.246;DP=462;FS=23.234;HRun=0;HaplotypeScore=122.2553;InbreedingCoeff=-0.2302;MQ=52.33;MQ0=18;MQRankSum=-1.027;QD=15.62;ReadPosRankSum=-0.926;VQSLOD=2.3487;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:29:99:99,0,115	0/1:9,0:9:37.88:140,0,38	0/1:10,0:6:18.77:19,0,99	0/0:16,0:11:12.13:0,12,263	0/1:19,0:20:10.32:10,0,83	0/0:14,0:14:9.03:0,9,243	0/0:17,0:17:15.04:0,15,280	1/1:20,0:16:24.29:706,24,0	0/1:11,0:11:48.74:198,0,49	0/1:14,0:13:11.10:547,0,11	1/1:13,0:16:2.92:318,3,0	0/1:12,0:12:58.68:59,0,68	0/0:8,4:15:16.30:0,16,105	0/0:4,6:10:0:0,0,0	0/1:19,0:19:83.12:437,0,83	0/1:15,0:13:58.26:98,0,58	0/1:28,0:29:25.51:673,0,26	0/1:20,0:23:98.09:239,0,98	0/1:12,0:12:9.75:336,0,10	0/1:6,0:5:42.35:159,0,42	0/0:9,15:23:6.02:0,6,134	0/1:17,0:16:54.55:126,0,55	1/1:13,0:13:2.61:226,3,0	1/1:8,0:35:14.75:223,15,0	0/0:12,0:11:27.07:0,27,565	0/1:11,0:10:35.62:384,0,36	1/1:19,0:18:3.56:416,4,0	0/1:2,0:3:4.92:7,0,5
chr10	11559659	.	A	ACAGAGA	4464.73	PASS	AB=1.000;AC=39;AF=0.722;AN=54;BaseQRankSum=2.791;DP=521;FS=7.083;HRun=0;HaplotypeScore=125.1090;InbreedingCoeff=0.5934;MQ=64.24;MQ0=9;MQRankSum=-1.068;QD=12.13;ReadPosRankSum=-0.283;VQSLOD=2.7434;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:33,0:33:6:120,6,0	1/1:9,0:9:14.90:114,15,0	0/0:29,0:23:6.37:0,6,96	0/0:34,0:29:10.14:0,10,183	0/1:22,0:22:17.10:19,0,17	0/0:16,0:16:9.03:0,9,173	0/0:21,0:21:14.95:0,15,189	1/1:29,0:27:32.45:370,32,0	1/1:8,0:8:6.02:189,6,0	1/1:21,0:20:24.05:508,24,0	1/1:10,0:10:12.02:304,12,0	1/1:9,0:9:5.92:48,6,0	1/1:8,0:8:2.99:23,3,0	0/1:12,0:11:0:0,0,0	1/1:14,0:14:18.05:462,18,0	1/1:12,0:10:9:124,9,0	1/1:35,0:35:32.99:609,33,0	1/1:20,6:27:15.01:384,15,0	1/1:20,0:20:17.87:171,18,0	0/1:7,0:7:6.12:110,0,6	0/0:36,0:33:6:0,6,62	1/1:17,0:17:8.99:74,9,0	1/1:10,0:10:5.23:101,5,0	1/1:30,0:29:1.22:4,1,0	0/0:16,0:15:21.04:0,21,345	1/1:13,0:12:17.92:334,18,0	1/1:22,0:21:23.99:398,24,0	./.
chr10	11559660	.	C	CAGAGAC	4464.73	PASS	AB=1.000;AC=39;AF=0.722;AN=54;BaseQRankSum=2.791;DP=524;FS=7.083;HRun=0;HaplotypeScore=125.6125;InbreedingCoeff=0.5934;MQ=65.25;MQ0=8;MQRankSum=0.228;QD=12.03;ReadPosRankSum=-0.259;VQSLOD=3.2372;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:33,0:33:6:120,6,0	1/1:9,0:9:14.90:114,15,0	0/0:30,0:24:6.37:0,6,96	0/0:34,0:29:10.14:0,10,183	0/1:22,0:22:17.10:19,0,17	0/0:16,0:16:9.03:0,9,173	0/0:19,0:19:14.95:0,15,189	1/1:30,0:28:32.45:370,32,0	1/1:9,0:9:6.02:189,6,0	1/1:15,6:21:24.05:508,24,0	1/1:10,0:10:12.02:304,12,0	1/1:9,0:9:5.92:48,6,0	1/1:7,0:7:2.99:23,3,0	0/1:12,0:11:0:0,0,0	1/1:15,0:15:18.05:462,18,0	1/1:12,0:10:9:124,9,0	1/1:35,0:35:32.99:609,33,0	1/1:26,0:26:15.01:384,15,0	1/1:21,0:21:17.87:171,18,0	0/1:8,0:8:6.12:110,0,6	0/0:36,0:34:6:0,6,62	1/1:17,0:17:8.99:74,9,0	1/1:10,0:10:5.23:101,5,0	1/1:28,0:27:1.22:4,1,0	0/0:16,0:15:21.04:0,21,345	1/1:14,0:13:17.92:334,18,0	1/1:22,0:21:23.99:398,24,0	./.
chr10	11564436	.	T	TA	12039.07	PASS	AB=0.563;AC=37;AF=0.661;AN=56;BaseQRankSum=-12.990;DP=600;FS=0.753;HRun=8;HaplotypeScore=60.6301;InbreedingCoeff=0.9387;MQ=87.70;MQ0=0;MQRankSum=-2.374;QD=27.55;ReadPosRankSum=0.753;VQSLOD=5.4350;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,44:48:99:1281,111,0	1/1:1,8:9:17.99:208,18,0	0/0:23,0:23:26.18:0,26,350	0/0:18,0:18:35.97:0,36,320	1/1:4,23:26:41.82:730,42,0	0/0:16,0:16:38.89:0,39,357	0/0:15,0:15:33.01:0,33,302	1/1:7,32:39:99:1125,99,0	1/1:1,19:20:54.16:623,54,0	1/1:1,19:21:60.01:672,60,0	1/1:2,13:15:42.08:468,42,0	0/0:17,0:17:45.02:0,45,412	0/0:16,0:16:42.02:0,42,384	0/0:25,0:25:72.03:0,72,659	1/1:0,16:16:45.13:519,45,0	0/1:2,7:9:3.40:218,0,3	1/1:3,37:40:93.28:1073,93,0	1/1:3,15:18:42.12:485,42,0	1/1:6,21:27:35.69:643,36,0	1/1:4,18:22:54.16:623,54,0	1/1:2,27:29:69.21:796,69,0	0/0:19,0:19:51.01:0,51,467	1/1:2,19:22:44.96:500,45,0	1/1:4,15:19:42.12:485,42,0	0/0:14,0:14:39.02:0,39,357	1/1:2,20:22:60.18:692,60,0	1/1:5,23:28:66.20:761,66,0	1/1:0,6:6:12.04:138,12,0
chr10	11565540	.	A	ATTTTTTTTT	8648.76	PASS	AB=0.975;AC=52;AF=0.929;AN=56;BaseQRankSum=0.619;DP=526;FS=24.916;HRun=11;HaplotypeScore=147.7113;InbreedingCoeff=0.2851;MQ=66.23;MQ0=3;MQRankSum=-2.796;QD=16.93;ReadPosRankSum=-2.545;VQSLOD=0.2655;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:27,5:40:18.06:696,18,0	1/1:9,0:9:12.04:269,12,0	0/1:17,0:14:11.31:21,0,11	0/1:24,0:18:10.04:10,0,16	1/1:15,0:21:18.06:355,18,0	1/1:14,0:14:9.03:215,9,0	1/1:16,0:14:12.01:168,12,0	1/1:27,0:27:36.21:551,36,0	1/1:23,0:21:20.66:440,21,0	1/1:24,0:36:37.40:658,37,0	1/1:20,0:31:20.06:414,20,0	1/1:10,0:9:6.02:97,6,0	1/1:9,0:9:9.03:219,9,0	1/1:12,0:12:14.72:271,15,0	1/1:10,0:10:3.01:81,3,0	1/1:7,5:13:3.01:135,3,0	1/1:27,0:27:18.04:356,18,0	1/1:14,0:14:15.05:444,15,0	1/1:25,0:24:23.27:449,23,0	1/1:9,8:19:24.05:605,24,0	1/1:7,0:7:6:84,6,0	1/1:8,0:8:6.02:96,6,0	1/1:19,0:18:21.07:484,21,0	1/1:12,6:18:12.04:458,12,0	0/0:15,0:15:32.68:0,33,710	1/1:19,0:19:10.13:310,10,0	1/1:14,4:23:8.11:264,8,0	1/1:10,0:10:21.07:499,21,0
chr10	11567801	.	CCT	C	4856.54	PASS	AB=0.880;AC=46;AF=0.821;AN=56;BaseQRankSum=1.904;DP=427;FS=0.652;HRun=0;HaplotypeScore=73.8655;InbreedingCoeff=0.5095;MQ=72.82;MQ0=18;MQRankSum=-5.117;QD=13.16;ReadPosRankSum=0.546;VQSLOD=3.9781;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:17:23.78:258,24,0	1/1:4,0:4:7.35:32,7,0	0/0:18,0:16:22.36:0,22,277	0/0:27,0:25:61.57:0,62,643	1/1:8,0:8:8.98:72,9,0	0/1:10,0:10:2.27:78,0,2	1/1:20,0:19:39.90:349,40,0	1/1:12,0:11:26.91:222,27,0	1/1:11,0:10:22.67:162,23,0	1/1:6,0:6:14.86:113,15,0	1/1:5,0:4:5.99:48,6,0	1/1:14,1:15:26.98:238,27,0	1/1:2,17:18:17.95:263,18,0	0/1:1,12:13:7.18:79,0,7	1/1:3,13:16:3.01:43,3,0	1/1:10,0:10:14.62:121,15,0	0/1:29,0:27:27.63:219,0,28	1/1:19,0:19:23.26:254,23,0	1/1:16,0:15:41.75:323,42,0	1/1:11,0:11:20.84:174,21,0	1/1:39,0:33:68.51:548,69,0	1/1:13,1:13:20.95:194,21,0	1/1:12,0:11:14.88:118,15,0	1/1:22,0:22:31.85:324,32,0	0/0:13,0:13:21.47:0,21,222	1/1:19,0:18:45.87:401,46,0	1/1:15,0:14:24.01:157,24,0	0/1:6,0:6:1.74:67,0,2
chr10	11567802	.	CTCTGTGTGTGTGTG	C	3623.43	PASS	AB=0.988;AC=33;AF=0.589;AN=56;BaseQRankSum=-3.650;DP=421;FS=15.996;HRun=0;HaplotypeScore=148.8718;InbreedingCoeff=-0.0274;MQ=73.03;MQ0=18;MQRankSum=-1.982;QD=10.82;ReadPosRankSum=-1.912;VQSLOD=1.2614;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:17:1.90:205,2,0	0/1:4,0:4:8.97:9,0,54	0/0:17,0:16:22.36:0,22,277	0/0:27,0:25:61.42:0,61,643	1/1:7,0:7:8.98:72,9,0	1/1:10,0:10:5.20:154,5,0	1/1:19,0:19:44.94:478,45,0	1/1:12,0:11:26.91:222,27,0	0/1:11,0:10:32.84:63,0,33	0/1:6,0:6:9.87:53,0,10	1/1:4,0:3:5.99:48,6,0	0/1:14,0:15:99:110,0,113	0/1:19,0:18:10.92:11,0,320	0/0:13,0:13:7.25:0,7,133	0/0:15,0:15:2.73:0,3,30	0/1:9,0:10:44.91:59,0,45	0/1:29,0:27:99:178,0,144	0/1:19,0:19:52.40:173,0,52	1/1:10,5:14:41.75:323,42,0	0/1:11,0:11:5.14:150,0,5	1/1:39,0:33:39.15:439,39,0	1/1:12,0:12:20.59:196,21,0	1/1:12,0:11:14.16:118,14,0	0/1:22,0:22:43.71:190,0,44	0/0:13,0:13:21.02:0,21,296	0/1:19,0:18:22.64:177,0,23	0/1:14,0:13:23.46:129,0,23	0/1:6,0:6:55.87:67,0,56
chr10	11567937	.	A	AAGACAGAC	5707.27	PASS	AB=0.990;AC=34;AF=0.630;AN=54;BaseQRankSum=-6.172;DP=593;FS=2.779;HRun=0;HaplotypeScore=154.5983;InbreedingCoeff=0.6209;MQ=68.95;MQ0=10;MQRankSum=-5.557;QD=14.86;ReadPosRankSum=-1.793;VQSLOD=4.0502;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:18,17:41:2.83:109,3,0	1/1:7,1:8:2.92:125,3,0	0/0:43,0:24:0.85:0,1,167	0/1:46,0:34:5.36:5,0,282	0/0:13,0:13:0.89:0,1,2	0/0:12,0:12:24.08:0,24,559	0/0:36,0:36:69.18:0,69,1627	1/1:16,0:16:27.08:632,27,0	1/1:10,4:14:6.02:240,6,0	1/1:14,0:14:21.07:796,21,0	1/1:10,0:10:6.02:214,6,0	0/0:23,0:23:39.11:0,39,830	0/0:21,0:21:48.13:0,48,1093	0/0:20,0:20:51.17:0,51,1265	1/1:6,12:20:9.03:375,9,0	1/1:2,13:17:3.01:125,3,0	1/1:15,10:27:4.19:323,4,0	1/1:6,7:17:3.01:125,3,0	1/1:12,10:20:30.09:867,30,0	1/1:4,12:16:3.01:125,3,0	1/1:11,12:28:3.01:84,3,0	0/0:27,0:27:54.18:0,54,1290	0/1:13,0:13:0:0,0,0	1/1:13,15:34:5.87:163,6,0	0/0:11,0:11:25.77:0,26,670	1/1:4,12:18:29.12:658,29,0	1/1:3,15:20:18.06:741,18,0	./.
chr10	11567939	.	G	GACAGACAG	5726.94	PASS	AB=1.000;AC=34;AF=0.630;AN=54;BaseQRankSum=-6.270;DP=581;FS=2.745;HRun=0;HaplotypeScore=152.9301;InbreedingCoeff=0.6212;MQ=67.28;MQ0=10;MQRankSum=-5.780;QD=15.23;ReadPosRankSum=-1.093;VQSLOD=3.5566;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:40,0:40:2.83:109,3,0	1/1:8,0:8:2.92:125,3,0	0/0:41,0:22:0.85:0,1,167	0/1:46,0:33:5.36:5,0,282	0/0:13,0:13:0.89:0,1,2	0/0:12,0:12:24.08:0,24,559	0/0:34,0:34:69.18:0,69,1627	1/1:15,0:15:27.08:597,27,0	1/1:12,0:12:6.02:240,6,0	1/1:8,5:14:24.08:850,24,0	1/1:10,0:10:6.02:214,6,0	0/0:23,0:23:39.11:0,39,830	0/0:21,0:21:48.13:0,48,1093	0/0:20,0:20:51.17:0,51,1265	1/1:21,0:21:9.03:375,9,0	1/1:17,0:17:3.01:125,3,0	1/1:27,0:27:4.19:323,4,0	1/1:17,0:17:3.01:125,3,0	1/1:20,0:18:30.09:867,30,0	1/1:14,0:14:3.01:125,3,0	1/1:29,0:28:3.01:84,3,0	0/0:27,0:27:54.18:0,54,1290	0/1:13,0:13:0:0,0,0	1/1:33,0:33:5.87:163,6,0	0/0:11,0:11:25.77:0,26,670	1/1:19,0:19:29.12:658,29,0	1/1:21,0:20:18.06:741,18,0	./.
chr10	11567951	.	G	GACAGACAG	5499.52	PASS	AB=0.981;AC=32;AF=0.593;AN=54;BaseQRankSum=-5.236;DP=604;FS=1.966;HRun=0;HaplotypeScore=169.4225;InbreedingCoeff=0.6273;MQ=61.85;MQ0=12;MQRankSum=-5.416;QD=14.90;ReadPosRankSum=-1.600;VQSLOD=3.7651;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:45,0:45:6.02:185,6,0	1/1:7,0:7:3.47:126,3,0	0/0:45,0:22:0.85:0,1,167	0/1:48,0:36:5.57:6,0,282	0/0:4,6:11:0.82:0,1,1	0/0:13,0:13:24.08:0,24,559	0/0:37,0:37:69.18:0,69,1627	1/1:16,0:16:27.08:597,27,0	1/1:9,0:9:6.02:240,6,0	1/1:15,0:15:24.08:828,24,0	1/1:8,0:8:6.02:214,6,0	0/0:23,0:23:39.11:0,39,830	0/0:19,0:19:48.13:0,48,1093	0/0:23,0:23:51.17:0,51,1265	1/1:21,0:21:9.03:375,9,0	1/1:14,0:14:3.01:125,3,0	0/0:23,0:23:2.13:0,2,7	1/1:17,0:17:6.02:250,6,0	1/1:21,0:19:26.09:861,26,0	1/1:18,0:18:3.01:125,3,0	1/1:32,0:31:3.01:84,3,0	0/0:26,0:26:54.18:0,54,1290	0/1:16,0:16:0:0,0,0	1/1:37,0:37:1.28:85,1,0	0/0:10,0:10:25.81:0,26,670	1/1:19,0:19:29.12:658,29,0	1/1:22,0:21:18.06:741,18,0	./.
chr10	11567957	.	C	CAG	1003.42	PASS	AB=0.975;AC=20;AF=0.357;AN=56;BaseQRankSum=7.879;DP=571;FS=9.408;HRun=0;HaplotypeScore=134.9277;InbreedingCoeff=-0.1728;MQ=57.32;MQ0=13;MQRankSum=-6.586;QD=3.16;ReadPosRankSum=1.265;VQSLOD=2.2692;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:43,0:43:60.63:61,0,369	1/1:6,0:6:2.01:19,2,0	0/0:47,0:19:26.38:0,26,382	0/1:46,0:31:40.82:41,0,434	1/1:10,0:10:2.74:12,3,0	0/0:13,0:13:30.10:0,30,456	0/0:39,0:39:93.29:0,93,1394	0/1:16,0:16:99:220,0,305	1/1:8,0:8:5.96:46,6,0	0/1:16,0:16:99:119,0,300	0/1:7,6:13:33.43:33,0,172	0/0:21,0:21:42.11:0,42,592	0/0:18,0:18:54.18:0,54,821	0/0:22,0:22:51.17:0,51,774	0/1:20,0:20:43.05:43,0,117	0/1:12,0:12:14.38:14,0,40	0/1:19,0:19:5.70:6,0,226	0/1:14,0:14:5.69:6,0,132	0/1:15,0:13:99:159,0,142	0/1:16,0:16:11.46:11,0,82	0/1:28,0:28:36.14:36,0,252	0/0:25,0:25:69.23:0,69,1045	0/0:13,5:18:12.04:0,12,181	0/0:34,0:34:15.69:0,16,295	0/0:11,0:11:33.09:0,33,480	0/1:14,0:14:99:228,0,181	0/1:20,0:18:67.06:111,0,67	0/0:5,0:4:9.03:0,9,135
chr10	11568114	.	AGGGAGGGGG	A	1383.28	PASS	AB=0.978;AC=15;AF=0.268;AN=56;BaseQRankSum=6.810;DP=426;FS=15.310;HRun=0;HaplotypeScore=144.2766;InbreedingCoeff=-0.3694;MQ=62.82;MQ0=7;MQRankSum=-1.850;QD=5.89;ReadPosRankSum=-2.849;VQSLOD=1.0651;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:19,0:18:14.06:14,0,643	0/0:6,0:6:2.68:0,3,99	0/1:29,0:11:3.43:3,0,372	0/0:36,0:18:20.77:0,21,377	0/0:16,0:16:32.54:0,33,728	0/1:20,0:18:46.07:46,0,692	0/1:16,0:16:56.36:56,0,524	0/1:14,13:26:99:515,0,759	0/0:12,0:11:27.07:0,27,613	0/1:10,0:10:79.03:79,0,760	0/0:12,0:12:23.97:0,24,445	0/1:12,0:11:35.54:36,0,218	0/1:14,0:14:99:114,0,941	0/1:18,0:17:49.11:49,0,974	0/0:24,0:24:51.17:0,51,1115	0/1:8,0:7:98.19:98,0,255	0/0:9,0:8:12.04:0,12,372	0/1:3,0:3:56.68:57,0,57	0/1:14,0:13:99:276,0,428	0/1:12,0:12:36.56:37,0,534	0/0:12,0:11:19.70:0,20,457	0/1:16,0:16:30.21:30,0,739	0/0:15,0:15:30.08:0,30,608	0/0:18,0:17:27.98:0,28,522	0/0:11,0:11:33.11:0,33,1302	0/1:17,0:15:99:127,0,969	0/0:14,0:11:24.99:0,25,864	0/0:6,0:6:18.04:0,18,404
chr10	11568770	.	G	GCA	3736.87	PASS	AB=0.793;AC=33;AF=0.611;AN=54;BaseQRankSum=-4.143;DP=752;FS=1.204;HRun=0;HaplotypeScore=124.8512;InbreedingCoeff=0.0242;MQ=64.32;MQ0=10;MQRankSum=-0.180;QD=6.15;ReadPosRankSum=-1.194;VQSLOD=3.2510;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:25,10:35:43.83:206,0,44	0/1:7,2:9:22.44:81,0,22	./.	0/1:37,0:22:0:0,0,0	0/1:12,7:20:80.55:117,0,81	1/1:24,0:24:18.05:229,18,0	1/1:28,0:28:9.69:94,10,0	0/1:28,0:25:3.04:3,0,5	0/1:19,8:28:2.08:123,0,2	0/1:23,4:30:48.05:113,0,48	1/1:8,5:15:3.01:45,3,0	1/1:11,3:28:28.40:274,28,0	1/1:28,0:29:15.14:137,15,0	1/1:14,0:36:23.09:182,23,0	0/1:15,9:25:85.88:199,0,86	1/1:14,12:27:8.25:406,8,0	0/1:20,5:27:99:103,0,171	0/1:7,8:15:15.18:201,0,15	0/0:13,0:18:7.56:0,8,40	0/0:13,0:30:28.55:0,29,159	0/0:25,0:54:48.08:0,48,237	1/1:15,0:32:9.11:44,9,0	0/1:21,1:23:21.23:232,0,21	0/1:19,22:42:47.91:283,0,48	0/0:8,0:8:15.02:0,15,155	1/1:19,15:34:29.68:358,30,0	0/1:10,13:27:99:262,0,102	1/1:6,0:6:4.56:47,5,0
chr10	11571078	.	GGT	G	15402.19	PASS	AB=0.739;AC=48;AF=0.857;AN=56;BaseQRankSum=0.145;DP=736;FS=16.607;HRun=0;HaplotypeScore=111.4749;InbreedingCoeff=0.4388;MQ=66.88;MQ0=12;MQRankSum=1.625;QD=22.78;ReadPosRankSum=1.746;VQSLOD=4.4634;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:11,13:24:15.26:520,0,15	1/1:5,6:11:24.06:275,24,0	0/0:34,0:25:29.50:0,30,374	0/0:26,0:17:13.43:0,13,196	1/1:5,19:26:44.80:495,45,0	1/1:4,19:24:44.97:521,45,0	1/1:10,24:35:66.03:769,66,0	1/1:26,7:31:32.04:442,32,0	1/1:9,11:21:44.94:500,45,0	1/1:18,17:34:61.61:846,62,0	1/1:6,10:17:44.97:516,45,0	1/1:9,14:23:46.69:546,47,0	1/1:5,12:17:35.88:434,36,0	1/1:7,14:20:51.13:591,51,0	1/1:9,27:36:84.26:1013,84,0	1/1:7,20:27:69.21:828,69,0	1/1:12,24:37:64.54:998,65,0	0/1:14,13:26:39.55:470,0,40	0/1:12,8:20:1.60:271,0,2	1/1:16,12:27:57.01:663,57,0	1/1:14,24:37:84.74:1036,85,0	1/1:11,17:27:18.14:677,18,0	1/1:8,19:27:72.21:856,72,0	1/1:10,14:25:41.54:457,42,0	0/1:20,2:22:35.15:35,0,624	1/1:13,18:30:44.23:702,44,0	1/1:5,26:31:66.20:794,66,0	1/1:1,7:8:12.04:145,12,0
chr10	11571097	.	GTA	G	4144.49	PASS	AB=0.988;AC=28;AF=0.500;AN=56;BaseQRankSum=11.286;DP=820;FS=8.040;HRun=0;HaplotypeScore=169.8910;InbreedingCoeff=-0.5791;MQ=54.74;MQ0=24;MQRankSum=3.292;QD=5.68;ReadPosRankSum=12.719;VQSLOD=-0.1559;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:22:67.99:161,0,68	1/1:10,0:10:22.22:118,22,0	0/0:35,0:15:9.94:0,10,258	0/0:29,1:9:4.79:0,5,161	1/1:22,1:23:3.23:151,3,0	0/1:28,0:28:99:105,0,129	0/1:37,1:38:99:223,0,143	0/1:47,1:43:73.97:74,0,354	0/1:22,1:22:41.63:136,0,42	0/1:37,0:36:99:143,0,179	0/1:23,0:23:99:144,0,104	0/1:25,1:26:52.70:155,0,53	0/1:22,0:22:58.50:114,0,59	0/1:23,0:22:0.23:154,0,0	0/1:39,0:39:25.33:253,0,25	0/1:31,0:30:61.38:235,0,61	0/1:42,0:39:11.45:264,0,11	0/1:25,1:25:77.73:165,0,78	0/1:23,0:22:31.34:31,0,212	0/1:28,0:25:22.18:153,0,22	0/1:56,1:57:99:311,0,200	0/1:31,0:30:66.16:201,0,66	1/1:26,0:26:25.49:267,25,0	0/1:28,1:29:29.15:133,0,29	0/0:24,0:24:41.62:0,42,917	0/1:28,0:26:42.48:151,0,42	0/1:32,0:32:20.03:264,0,20	0/1:10,0:10:37.79:38,0,48
chr10	11571162	.	G	GTA	1682.05	PASS	AB=0.750;AC=7;AF=0.125;AN=56;BaseQRankSum=4.209;DP=912;FS=12.885;HRun=0;HaplotypeScore=184.5530;InbreedingCoeff=0.8310;MQ=50.69;MQ0=51;MQRankSum=-2.734;QD=21.03;ReadPosRankSum=-1.809;VQSLOD=2.9512;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:40:75.18:0,75,1064	0/0:10,0:10:14.95:0,15,229	0/0:49,0:12:27.09:0,27,410	0/0:61,0:8:23.84:0,24,298	0/0:17,0:15:39.02:0,39,516	0/0:32,0:32:90.27:0,90,1320	0/0:37,0:37:91.32:0,91,1257	0/0:53,0:44:79.41:0,79,1116	0/0:27,0:27:45.12:0,45,644	0/0:38,0:34:90.12:0,90,1304	0/0:24,0:24:48.14:0,48,692	1/1:12,10:22:11.94:658,12,0	1/1:8,11:18:35.83:527,36,0	1/1:12,3:13:23.12:273,23,0	0/0:35,0:33:63.14:0,63,859	0/0:38,0:37:72.17:0,72,1007	0/0:32,0:32:67.18:0,67,949	0/0:25,0:25:57.05:0,57,788	0/0:25,0:15:30.08:0,30,434	0/0:24,0:24:60.15:0,60,845	0/0:115,0:108:99:0,187,2755	0/1:15,8:22:11.34:369,0,11	0/0:15,0:14:26.93:0,27,369	0/0:42,0:40:63.02:0,63,919	0/0:18,0:18:48.15:0,48,703	0/0:33,0:27:78.24:0,78,1147	0/0:27,0:27:57.14:0,57,796	0/0:9,0:9:24.08:0,24,367
chr10	11571167	.	TG	T	692.58	PASS	AB=0.773;AC=4;AF=0.071;AN=56;BaseQRankSum=8.473;DP=898;FS=7.088;HRun=2;HaplotypeScore=173.4501;InbreedingCoeff=-0.0777;MQ=51.45;MQ0=49;MQRankSum=-5.384;QD=8.99;ReadPosRankSum=-3.054;VQSLOD=-0.0165;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:39:78.19:0,78,1065	0/0:10,0:10:15.48:0,15,221	0/0:53,0:12:32.86:0,33,442	0/0:63,1:11:30.10:0,30,411	0/0:18,0:16:36.08:0,36,509	0/0:32,0:32:90.26:0,90,1309	0/0:32,0:32:80.87:0,81,1142	0/0:45,2:40:63.46:0,63,1364	0/0:28,0:27:45.15:0,45,669	0/0:38,0:35:96.24:0,96,1340	0/0:24,0:24:45.15:0,45,670	0/1:16,4:20:93:319,0,93	0/1:14,5:18:69.22:199,0,69	0/1:7,7:12:40.21:102,0,40	0/0:33,0:31:60.16:0,60,863	0/0:36,0:35:75.18:0,75,1021	0/0:29,2:31:36.42:0,36,879	0/0:27,0:26:57.19:0,57,846	0/0:28,0:16:39.08:0,39,539	0/0:24,0:24:63.13:0,63,873	0/0:119,0:113:99:0,205,2963	0/1:18,6:21:68.52:182,0,69	0/0:11,0:10:20.96:0,21,315	0/0:40,0:41:66.01:0,66,895	0/0:20,0:20:57.19:0,57,834	0/0:30,0:28:79.51:0,80,1147	0/0:24,0:24:48.16:0,48,705	0/0:9,0:9:24.08:0,24,355
chr10	11571191	.	TGTGG	T	817.20	PASS	AB=0.983;AC=19;AF=0.339;AN=56;BaseQRankSum=-3.734;DP=818;FS=0.000;HRun=0;HaplotypeScore=195.1772;InbreedingCoeff=-0.1960;MQ=52.82;MQ0=31;MQRankSum=-2.203;QD=1.84;ReadPosRankSum=-6.680;VQSLOD=0.1877;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:48,1:48:38.38:44,0,38	0/0:13,0:13:5.95:0,6,16	0/0:51,0:11:32.79:0,33,441	0/0:62,0:18:44.43:0,44,637	0/1:15,1:15:47.50:47,0,49	0/1:22,0:22:35.84:36,0,605	0/1:27,0:27:57.44:57,0,583	1/1:31,0:27:23.26:155,23,0	0/1:29,2:30:20.36:40,0,20	0/1:27,0:24:1.77:125,0,2	0/0:22,0:22:10.73:0,11,39	0/1:18,0:18:46.30:46,0,155	0/1:11,0:10:27.18:27,0,132	0/0:17,0:16:37.54:0,38,304	0/0:36,1:36:17.23:0,17,51	0/1:32,0:32:18.13:44,0,18	0/0:29,0:29:15.70:0,16,42	0/1:25,0:24:24.15:24,0,50	0/1:24,0:20:12.33:89,0,12	0/1:18,1:19:15.28:45,0,15	0/0:103,0:97:33.03:0,33,131	0/0:16,0:14:18.01:0,18,211	0/1:12,0:12:14.22:14,0,52	0/1:45,2:47:27.88:50,0,28	0/0:18,0:18:45.10:0,45,1040	0/1:28,0:27:6.31:62,0,6	1/1:22,1:22:0.30:72,0,0	0/0:7,0:7:4.43:0,4,12
chr10	11571193	.	TGG	T	15027.88	PASS	AB=0.824;AC=47;AF=0.839;AN=56;BaseQRankSum=-1.921;DP=812;FS=13.097;HRun=3;HaplotypeScore=124.3192;InbreedingCoeff=0.6187;MQ=53.32;MQ0=29;MQRankSum=2.007;QD=22.07;ReadPosRankSum=3.334;VQSLOD=2.1157;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,42:49:74.88:1058,75,0	1/1:0,12:13:15.64:271,16,0	0/0:49,1:13:28.04:0,28,346	0/0:62,0:19:25.32:0,25,473	0/1:3,13:15:1.05:229,0,1	0/1:21,1:22:79.91:80,0,291	0/1:25,1:26:99:135,0,254	1/1:5,23:26:63.85:715,64,0	1/1:4,28:31:51.14:753,51,0	1/1:6,19:21:46.05:728,46,0	1/1:2,20:21:32.81:475,33,0	1/1:16,3:19:35.97:298,36,0	1/1:11,1:11:20.31:132,20,0	1/1:17,1:18:27.70:164,28,0	1/1:2,35:36:55.90:944,56,0	1/1:1,31:32:54.18:805,54,0	1/1:2,27:29:63.21:960,63,0	1/1:1,23:24:29.40:708,29,0	1/1:16,8:21:35.91:591,36,0	1/1:1,17:18:45.11:643,45,0	1/1:15,83:92:99:1982,113,0	1/1:14,2:14:10.57:88,11,0	1/1:2,8:10:8.70:370,9,0	1/1:10,37:47:77.26:1060,77,0	0/0:18,0:18:37.52:0,38,755	1/1:2,26:27:81.21:1148,81,0	1/1:2,22:23:35.93:460,36,0	1/1:0,7:7:15.05:229,15,0
chr10	11571639	.	GGT	G	1197.86	PASS	AB=0.962;AC=30;AF=0.556;AN=54;BaseQRankSum=1.928;DP=785;FS=1.394;HRun=0;HaplotypeScore=107.1915;InbreedingCoeff=-0.1008;MQ=55.76;MQ0=33;MQRankSum=0.053;QD=1.93;ReadPosRankSum=-2.444;VQSLOD=1.5469;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:31:45.88:46,0,156	0/0:8,0:8:5.93:0,6,58	./.	0/0:40,0:14:0:0,0,0	0/1:23,2:24:21.78:22,0,108	0/1:22,0:23:7.32:8,0,7	0/0:23,0:28:5.03:0,5,30	1/1:33,0:27:1.14:3,1,0	1/1:21,0:20:5.91:48,6,0	0/1:30,0:29:69.79:70,0,192	0/0:20,0:15:6.02:0,6,88	1/1:30,1:31:17.61:154,18,0	1/1:13,5:17:4.82:57,5,0	1/1:15,0:15:8.44:56,8,0	0/1:22,0:20:12.87:13,0,156	0/1:20,1:20:48.08:87,0,48	0/1:30,1:33:43.79:44,0,356	0/1:26,0:23:68.99:69,0,237	1/1:29,0:24:8.18:57,8,0	1/1:16,2:16:12.03:128,12,0	1/1:81,1:76:14.88:146,15,0	1/1:25,0:24:9.49:97,9,0	0/1:25,1:23:77.90:78,0,92	0/1:42,1:43:70.72:71,0,403	0/0:22,0:22:3.01:0,3,32	0/1:45,0:41:78.16:78,0,117	0/1:14,2:15:23.12:23,0,78	0/0:3,0:3:2.88:0,3,15
chr10	11572090	.	CCATT	C	3735.29	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=12.506;DP=653;FS=10.535;HRun=0;HaplotypeScore=127.0399;InbreedingCoeff=0.9961;MQ=73.00;MQ0=0;MQRankSum=-11.372;QD=51.17;ReadPosRankSum=1.310;VQSLOD=4.6691;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,120,3356	0/0:10,0:10:30.10:0,30,853	0/0:17,0:17:27.50:0,28,1063	0/0:7,0:7:18.06:0,18,432	0/0:20,0:20:60.21:0,60,1715	0/0:25,0:25:75.26:0,75,2139	0/0:23,0:23:69.24:0,69,1976	0/0:26,0:26:75.25:0,75,2094	0/0:28,0:28:84.27:0,84,2362	0/0:31,0:30:84.28:0,84,2248	0/0:18,0:18:54.17:0,54,1486	1/1:3,20:23:69.24:1343,69,0	1/1:1,10:11:33.10:626,33,0	1/1:0,18:18:51.17:991,51,0	0/0:34,0:34:99:0,102,2867	0/0:19,0:19:57.20:0,57,1606	0/0:33,0:33:99:0,99,2761	0/0:23,0:23:69.21:0,69,1826	0/0:15,0:15:45.15:0,45,1238	0/0:22,0:22:66.23:0,66,1846	0/0:50,0:50:99:0,151,4311	1/1:1,19:21:39.13:775,39,0	0/0:25,0:25:72.23:0,72,1901	0/0:27,0:27:81.28:0,81,2333	0/0:19,0:19:54.16:0,54,1489	0/0:30,0:30:87.30:0,87,2493	0/0:31,0:31:93.28:0,93,2497	0/0:7,0:7:21.07:0,21,609
chr10	11572098	.	CCA	C	2593.16	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=12.882;DP=665;FS=7.336;HRun=0;HaplotypeScore=105.4469;InbreedingCoeff=0.9971;MQ=75.64;MQ0=0;MQRankSum=-11.739;QD=37.05;ReadPosRankSum=1.501;VQSLOD=5.5378;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,132,2671	0/0:10,0:10:30.10:0,30,608	0/0:18,0:18:49.41:0,49,953	0/0:11,0:11:20.12:0,20,377	0/0:20,0:20:60.21:0,60,1219	0/0:24,0:24:72.23:0,72,1427	0/0:22,0:22:66.22:0,66,1306	0/0:30,0:30:90.31:0,90,1801	0/0:29,0:29:87.30:0,87,1767	0/0:30,0:29:75.26:0,75,1524	0/0:19,0:19:57.20:0,57,1146	1/1:1,20:21:63.18:937,63,0	1/1:0,10:10:30.10:460,30,0	1/1:2,18:20:56.99:801,57,0	0/0:33,0:33:99:0,99,1978	0/0:21,0:21:63.22:0,63,1264	0/0:31,0:31:93.32:0,93,1871	0/0:24,0:24:72.23:0,72,1412	0/0:14,0:14:42.14:0,42,850	0/0:23,0:23:63.22:0,63,1265	0/0:50,0:50:99:0,150,3009	1/1:0,19:19:36.12:555,36,0	0/0:25,0:25:72.25:0,72,1463	0/0:31,0:31:93.32:0,93,1827	0/0:19,0:19:54.66:0,55,1088	0/0:29,0:29:84.29:0,84,1708	0/0:31,0:31:93.32:0,93,1873	0/0:7,0:7:21.07:0,21,420
chr10	11573300	.	C	CCTTACCCT	31651.04	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-4.293;DP=501;FS=0.000;HRun=0;HaplotypeScore=117.9236;InbreedingCoeff=0.9626;MQ=72.02;MQ0=0;MQRankSum=-11.211;QD=72.26;ReadPosRankSum=3.451;VQSLOD=4.9752;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,21:23:42.14:1682,42,0	1/1:0,9:9:21.07:859,21,0	0/0:20,0:20:16.98:0,17,1397	0/0:23,0:23:54.18:0,54,1351	1/1:2,24:28:57.01:2081,57,0	1/1:12,0:12:30.02:466,30,0	1/1:21,0:21:45.15:855,45,0	1/1:13,22:41:99:3836,111,0	1/1:3,12:15:36.10:1385,36,0	1/1:0,14:14:33.11:1319,33,0	1/1:1,9:12:21.07:855,21,0	1/1:17,0:17:33.11:648,33,0	1/1:18,0:18:42.14:811,42,0	1/1:15,0:15:27.09:520,27,0	1/1:4,10:14:33.11:1274,33,0	1/1:2,12:17:30.10:1304,30,0	1/1:4,14:17:27.56:1140,28,0	1/1:1,10:15:15.05:655,15,0	1/1:4,8:14:33.07:1136,33,0	1/1:7,19:26:54.19:2117,54,0	1/1:2,5:8:18.02:501,18,0	1/1:11,0:11:30.10:587,30,0	1/1:1,7:8:24.08:928,24,0	1/1:4,19:23:38.96:1396,39,0	0/0:20,0:20:54.16:0,54,1432	1/1:3,21:24:66.23:2772,66,0	1/1:4,23:28:51.04:2131,51,0	1/1:0,5:5:9.03:393,9,0
chr10	11573303	.	T	TACCCTC	20412.86	PASS	AB=1.000;AC=47;AF=0.839;AN=56;BaseQRankSum=2.330;DP=444;FS=1.560;HRun=0;HaplotypeScore=132.6100;InbreedingCoeff=0.5320;MQ=73.14;MQ0=0;MQRankSum=-12.261;QD=53.30;ReadPosRankSum=6.131;VQSLOD=4.7882;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:16:41.61:833,42,0	1/1:7,0:7:20.86:434,21,0	0/0:20,0:20:44.42:0,44,1280	0/0:22,0:22:57.16:0,57,1226	1/1:22,0:22:39.67:1037,40,0	1/1:1,10:13:30.10:953,30,0	1/1:0,18:24:45.15:1574,45,0	0/1:33,0:33:8.64:1279,0,9	1/1:13,0:13:30.83:732,31,0	1/1:11,0:11:4.09:607,4,0	1/1:11,0:11:3.78:410,4,0	1/1:0,15:17:33.11:1184,33,0	1/1:2,14:21:42.14:1491,42,0	1/1:1,13:18:27.09:957,27,0	1/1:12,0:12:27.66:610,28,0	1/1:13,0:13:30.10:698,30,0	1/1:15,0:14:4.61:565,5,0	1/1:9,0:9:15.05:351,15,0	0/1:11,0:9:8.86:464,0,9	0/1:23,0:23:24.09:975,0,24	1/1:7,0:7:17.32:198,17,0	1/1:1,10:13:30.02:1073,30,0	1/1:8,0:8:23.48:443,23,0	1/1:20,0:20:44.97:840,45,0	0/0:19,0:19:54.16:0,54,1249	1/1:24,0:24:61.18:1427,61,0	1/1:19,0:19:26.97:1068,27,0	1/1:3,0:3:9.03:211,9,0
chr10	11573341	.	T	TTC	1460.45	PASS	AB=0.950;AC=32;AF=0.640;AN=50;BaseQRankSum=-0.772;DP=421;FS=23.451;HRun=0;HaplotypeScore=117.7367;InbreedingCoeff=0.1723;MQ=57.95;MQ0=10;MQRankSum=0.290;QD=5.02;ReadPosRankSum=-0.814;VQSLOD=1.1127;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:8,0:8:1.92:69,0,2	1/1:7,0:7:3:25,3,0	0/1:25,0:15:0:0,0,0	./.	1/1:8,0:8:2.99:24,3,0	1/1:13,0:13:11.89:87,12,0	0/1:19,0:20:8.63:18,0,9	0/0:30,0:30:1.17:0,1,6	1/1:18,1:19:9.01:104,9,0	1/1:13,0:13:6.68:32,7,0	1/1:7,1:7:6.01:72,6,0	0/0:10,0:10:5.94:0,6,50	1/1:15,0:15:4.74:26,5,0	0/0:10,0:10:2.84:0,3,14	1/1:11,0:11:8.36:56,8,0	./.	1/1:26,0:23:17.97:132,18,0	0/1:16,1:17:26.44:141,0,26	0/0:11,0:10:1.25:0,1,3	1/1:13,0:13:8.96:69,9,0	./.	0/0:8,0:9:2.76:0,3,14	1/1:9,2:11:8.85:112,9,0	0/1:19,8:26:2.31:352,0,2	0/1:12,0:13:11.80:35,0,12	0/1:3,0:3:0:0,0,0	0/1:19,0:18:17.39:130,0,17	1/1:15,0:14:15.23:108,15,0
chr10	11574237	.	T	TG	1364.07	PASS	AB=0.987;AC=35;AF=0.673;AN=52;BaseQRankSum=-2.957;DP=155;FS=5.254;HRun=6;HaplotypeScore=30.5964;InbreedingCoeff=0.5048;MQ=92.61;MQ0=2;MQRankSum=-2.066;QD=11.09;ReadPosRankSum=0.025;VQSLOD=0.3028;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,3:10:18.04:212,18,0	./.	0/1:23,0:11:8.34:8,0,141	0/1:24,0:13:18.54:19,0,151	1/1:1,3:4:9.03:113,9,0	0/0:5,0:5:12.01:0,12,116	0/0:2,0:2:3:0,3,31	1/1:3,2:5:12.04:148,12,0	1/1:0,1:1:3.01:38,3,0	1/1:1,1:2:5.98:58,6,0	1/1:3,1:4:8.05:73,8,0	0/0:2,0:2:6.01:0,6,61	0/0:5,0:5:15.03:0,15,152	0/0:7,0:7:17.60:0,18,169	1/1:2,5:7:9.03:113,9,0	1/1:0,4:4:9.03:113,9,0	0/1:2,0:2:0:0,0,0	1/1:2,0:2:2.99:24,3,0	1/1:2,7:9:21.04:236,21,0	./.	1/1:2,4:6:6.02:75,6,0	0/0:6,0:6:12.03:0,12,122	1/1:1,3:4:5.89:75,6,0	1/1:2,4:6:6.02:75,6,0	0/0:3,0:3:6.01:0,6,61	1/1:1,2:3:6.02:75,6,0	1/1:0,2:2:3.01:38,3,0	1/1:0,1:1:3.01:38,3,0
chr10	11574261	.	G	GGTTTTTTTTTTGTTGTT	12575.15	PASS	AB=0.976;AC=39;AF=0.696;AN=56;BaseQRankSum=-3.254;DP=205;FS=15.142;HRun=0;HaplotypeScore=84.5147;InbreedingCoeff=0.6077;MQ=97.58;MQ0=5;MQRankSum=-4.793;QD=87.94;ReadPosRankSum=0.797;VQSLOD=3.4003;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,3:12:24.08:1834,24,0	1/1:2,0:2:6.01:267,6,0	0/0:46,0:24:37.87:0,38,491	0/1:40,0:20:20.64:21,0,197	1/1:3,0:2:6.02:142,6,0	0/0:4,0:4:12.04:0,12,423	0/0:1,0:1:3.01:0,3,140	1/1:16,0:16:42.14:1728,42,0	1/1:4,0:4:12.04:860,12,0	1/1:4,1:6:18.02:776,18,0	1/1:2,1:4:8.99:298,9,0	0/0:2,0:2:3.01:0,3,139	0/0:3,0:3:9.03:0,9,312	0/0:2,0:2:6:0,6,162	1/1:1,0:1:3.01:86,3,0	1/1:3,0:3:9.03:581,9,0	1/1:8,0:8:21:723,21,0	1/1:3,0:3:9.03:445,9,0	1/1:8,0:6:12:521,12,0	1/1:1,0:3:6.02:381,6,0	1/1:6,0:6:18.04:574,18,0	0/0:1,0:1:3.01:0,3,140	1/1:5,0:5:12.03:430,12,0	1/1:1,0:1:3.01:36,3,0	0/0:3,0:3:6.02:0,6,246	1/1:8,0:8:18.06:1199,18,0	1/1:8,0:8:24.08:1428,24,0	1/1:0,1:1:3.01:246,3,0
chr10	11574274	.	T	TG	125.65	PASS	AB=0.861;AC=6;AF=0.107;AN=56;BaseQRankSum=2.846;DP=217;FS=4.936;HRun=0;HaplotypeScore=39.3196;InbreedingCoeff=-0.1162;MQ=81.41;MQ0=4;MQRankSum=-3.561;QD=2.46;ReadPosRankSum=0.096;VQSLOD=1.3520;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:33.09:0,33,421	0/0:2,0:2:6.02:0,6,84	0/0:32,0:19:39.02:0,39,435	0/0:26,0:13:19.59:0,20,179	0/1:2,2:3:16.90:17,0,75	0/0:5,0:5:14.99:0,15,171	0/0:3,0:3:9.03:0,9,126	0/1:13,4:17:99:141,0,454	0/0:7,0:7:21.07:0,21,293	0/0:7,0:7:21.06:0,21,280	0/0:5,0:5:15.05:0,15,207	0/0:4,0:4:12.01:0,12,147	0/0:4,0:4:12.04:0,12,168	0/0:4,0:4:12.04:0,12,166	0/1:2,0:2:29.34:29,0,36	0/0:3,0:3:9.03:0,9,125	0/1:9,1:10:14.32:14,0,322	0/0:3,0:3:9.03:0,9,126	0/1:11,1:10:17.59:18,0,331	0/0:7,0:7:21.06:0,21,276	0/1:5,1:6:26.95:27,0,191	0/0:5,0:5:12:0,12,145	0/0:7,0:7:18.04:0,18,220	0/0:2,0:2:3.01:0,3,42	0/0:3,0:3:9.03:0,9,126	0/0:10,0:10:27.09:0,27,377	0/0:11,0:11:30.10:0,30,418	0/0:1,0:1:1.82:0,2,5
chr10	11574521	.	AG	A	1641.46	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=3.523;DP=402;FS=0.000;HRun=2;HaplotypeScore=122.7832;InbreedingCoeff=0.9253;MQ=92.09;MQ0=0;MQRankSum=-2.123;QD=17.46;ReadPosRankSum=3.707;VQSLOD=3.7829;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:69.21:0,69,1010	0/0:2,0:2:6.02:0,6,90	0/0:22,0:22:66.19:0,66,927	0/0:15,0:15:45.14:0,45,654	0/0:10,0:10:21.07:0,21,314	1/1:0,15:15:39.13:503,39,0	1/1:0,20:20:54.18:699,54,0	0/0:34,0:34:99:0,99,1483	0/0:11,0:11:30.10:0,30,439	0/0:13,0:13:39.13:0,39,584	0/0:7,0:7:15.05:0,15,225	1/1:17,0:17:44.27:233,44,0	1/1:15,0:15:17.02:155,17,0	1/1:17,0:17:17.37:150,17,0	0/0:11,0:11:30.09:0,30,431	0/0:7,0:7:15.05:0,15,225	0/0:29,0:29:78.26:0,78,1158	0/0:16,0:16:36.12:0,36,539	0/0:21,0:21:57.19:0,57,849	0/0:14,0:14:33.11:0,33,485	0/0:9,0:9:27.09:0,27,404	1/1:10,0:10:19.45:87,19,0	0/0:6,0:6:12.04:0,12,179	0/0:10,0:10:30.10:0,30,449	0/0:6,0:6:18.06:0,18,270	0/0:25,0:25:69.23:0,69,1033	0/0:14,0:14:35.99:0,36,539	0/0:1,0:1:3.01:0,3,45
chr10	11574523	.	GT	G	2130.92	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=2.131;DP=400;FS=0.445;HRun=2;HaplotypeScore=120.9711;InbreedingCoeff=0.9553;MQ=91.32;MQ0=0;MQRankSum=-3.876;QD=22.91;ReadPosRankSum=3.774;VQSLOD=3.5678;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:66.22:0,66,965	0/0:2,0:2:6.02:0,6,90	0/0:21,0:21:59.94:0,60,854	0/0:15,0:15:45.12:0,45,646	0/0:10,0:10:21.07:0,21,314	1/1:15,0:15:36.49:178,36,0	1/1:20,0:20:50.48:256,50,0	0/0:34,0:34:99:0,102,1499	0/0:11,0:11:33.07:0,33,449	0/0:13,0:13:39.13:0,39,584	0/0:7,0:7:18.02:0,18,244	1/1:1,16:17:51.09:583,51,0	1/1:1,14:15:42.12:485,42,0	1/1:0,16:16:45.13:521,45,0	0/0:11,0:11:30.07:0,30,414	0/0:9,0:9:18.05:0,18,250	0/0:29,0:29:78.26:0,78,1141	0/0:16,0:16:39.06:0,39,548	0/0:20,0:20:60.20:0,60,881	0/0:13,0:13:33.11:0,33,493	0/0:9,0:9:27.09:0,27,401	1/1:0,10:10:27.06:295,27,0	0/0:6,0:6:12.04:0,12,180	0/0:10,0:10:30.10:0,30,440	0/0:6,0:6:18.06:0,18,270	0/0:24,0:24:72.22:0,72,1055	0/0:14,0:14:35.99:0,36,535	0/0:3,0:3:8.99:0,9,92
chr10	11575244	.	C	CATGT	20242.98	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=12.258;DP=614;FS=39.413;HRun=0;HaplotypeScore=114.1456;InbreedingCoeff=0.9944;MQ=91.69;MQ0=2;MQRankSum=-7.941;QD=71.53;ReadPosRankSum=7.865;VQSLOD=3.2650;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,22:25:54.19:1514,54,0	1/1:1,9:12:30.10:807,30,0	0/0:32,0:32:87.30:0,87,1798	0/0:22,0:22:61.99:0,62,1277	1/1:0,18:19:48.16:1341,48,0	0/0:24,0:24:69.20:0,69,1336	0/0:23,0:23:66.23:0,66,1383	0/0:27,0:26:78.23:0,78,1521	1/1:1,13:14:39.13:1087,39,0	1/1:1,10:14:39.13:982,39,0	1/1:0,6:7:15.05:419,15,0	0/0:25,0:25:75.26:0,75,1547	0/0:23,0:23:63.22:0,63,1321	0/0:21,0:21:60.21:0,60,1233	1/1:2,22:24:72.25:2009,72,0	1/1:0,29:30:87.30:2423,87,0	1/1:1,33:37:90.29:2517,90,0	1/1:0,17:19:48.16:1347,48,0	0/0:32,0:32:96.33:0,96,1984	0/0:26,0:26:75.24:0,75,1532	0/0:32,0:32:93.29:0,93,1875	0/0:20,0:20:60.17:0,60,1145	1/1:0,6:6:15.05:416,15,0	1/1:1,23:24:63.06:1750,63,0	0/0:24,0:24:72.24:0,72,1460	1/1:0,11:13:33.10:864,33,0	1/1:1,28:29:81.28:2263,81,0	1/1:0,8:8:18.06:504,18,0
chr10	11575427	.	A	ATCTCCCTC	4501.08	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-8.709;DP=721;FS=6.101;HRun=0;HaplotypeScore=178.8246;InbreedingCoeff=0.9831;MQ=72.28;MQ0=0;MQRankSum=-8.038;QD=54.89;ReadPosRankSum=-0.871;VQSLOD=4.1356;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:84.29:0,84,2090	0/0:12,0:12:36.08:0,36,867	0/0:32,0:29:35.02:0,35,764	0/0:26,0:25:18.98:0,19,498	0/0:31,0:31:78.25:0,78,1854	0/0:21,0:21:47.31:0,47,890	0/0:31,0:31:51.17:0,51,1193	0/0:32,0:32:51.14:0,51,1068	0/0:18,0:18:42.14:0,42,1037	0/0:29,0:29:69.23:0,69,1715	0/0:20,0:20:48.16:0,48,1214	1/1:8,4:17:12.04:493,12,0	1/1:5,9:17:24.08:1002,24,0	1/1:4,10:17:27.09:1127,27,0	0/0:28,0:28:63.22:0,63,1575	0/0:34,0:34:66.23:0,66,1652	0/0:32,0:32:72.19:0,72,1738	0/0:22,0:22:51.17:0,51,1308	0/0:16,0:16:15.05:0,15,353	0/0:30,0:30:77.99:0,78,1844	0/0:38,0:38:81.20:0,81,1812	1/1:9,17:31:45.15:1878,45,0	0/0:23,0:23:60.19:0,60,1483	0/0:27,0:27:51.17:0,51,1201	0/0:28,0:28:69.08:0,69,1642	0/0:24,0:24:61.45:0,61,1601	0/0:37,0:37:93.30:0,93,2314	0/0:9,0:9:21.07:0,21,539
chr10	11576457	.	A	AT	2703.22	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-10.720;DP=504;FS=14.248;HRun=8;HaplotypeScore=47.4834;InbreedingCoeff=0.9833;MQ=66.42;MQ0=2;MQRankSum=-0.715;QD=23.92;ReadPosRankSum=-1.987;VQSLOD=2.2155;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,138,1248	0/0:11,0:11:30.02:0,30,275	0/0:7,0:6:9:0,9,82	0/0:10,0:8:18:0,18,163	0/0:19,0:19:48.01:0,48,436	1/1:3,22:25:41.73:719,42,0	1/1:2,7:9:21.06:242,21,0	1/1:3,32:35:90.22:1022,90,0	0/0:15,0:15:42:0,42,379	0/0:31,0:31:71.39:0,71,640	0/0:17,0:17:42.02:0,42,384	0/0:13,0:13:35.99:0,36,323	0/0:15,0:15:45.02:0,45,412	0/0:12,0:12:35.95:0,36,315	0/0:13,0:13:32.98:0,33,295	0/0:20,0:20:54.03:0,54,494	0/0:25,0:25:71.99:0,72,648	0/0:17,0:17:48.02:0,48,436	1/1:5,13:18:39.04:421,39,0	1/1:3,9:12:24.07:277,24,0	1/1:5,9:14:18.05:208,18,0	0/0:18,0:18:39:0,39,354	0/0:15,0:15:42:0,42,379	0/0:16,0:16:42.01:0,42,380	0/0:10,0:10:30:0,30,270	0/0:29,0:29:75.02:0,75,683	0/0:19,0:19:48.02:0,48,439	0/0:11,0:11:33.02:0,33,302
chr10	11576615	.	GCC	G	1596.99	PASS	AB=0.861;AC=18;AF=0.321;AN=56;BaseQRankSum=4.486;DP=322;FS=22.408;HRun=12;HaplotypeScore=46.5746;InbreedingCoeff=0.7421;MQ=62.01;MQ0=4;MQRankSum=-1.712;QD=10.86;ReadPosRankSum=4.209;VQSLOD=0.2759;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:17:6.89:0,7,72	0/0:5,0:6:2.36:0,2,9	0/0:14,0:10:9.69:0,10,65	0/1:7,0:5:0.81:1,0,2	0/0:5,0:6:8.52:0,9,97	0/0:9,0:9:5.51:0,6,51	0/0:10,0:12:15.52:0,16,194	1/1:14,17:29:42:427,42,0	0/0:8,0:8:15.03:0,15,187	0/0:5,0:6:0:0,0,0	0/0:9,0:10:13.99:0,14,113	1/1:0,0:9:21.96:95,22,0	1/1:1,0:7:13.72:59,14,0	1/1:0,0:17:32.93:142,33,0	0/1:4,0:5:3.10:3,0,73	0/0:5,0:5:12.03:0,12,153	0/0:15,0:16:32.56:0,33,416	0/0:4,0:4:11.99:0,12,132	1/1:5,8:13:24.01:243,24,0	1/1:8,10:18:26.89:274,27,0	1/1:8,18:26:45.53:458,46,0	1/1:4,0:13:19.18:83,19,0	0/0:8,0:8:0.47:0,0,1	0/0:16,0:18:11.41:0,11,226	0/0:6,0:7:11.48:0,11,82	0/0:6,0:7:8.52:0,9,92	0/0:11,0:13:11.97:0,12,132	0/0:5,0:5:8.96:0,9,85
chr10	11577283	.	C	CT	1277.62	PASS	AB=0.981;AC=18;AF=0.321;AN=56;BaseQRankSum=-1.590;DP=588;FS=6.483;HRun=12;HaplotypeScore=91.8147;InbreedingCoeff=0.1551;MQ=68.14;MQ0=0;MQRankSum=-0.227;QD=4.06;ReadPosRankSum=-2.979;VQSLOD=0.7809;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:22:30.11:30,0,92	0/1:10,0:10:2.70:3,0,40	0/0:15,0:11:8.26:0,8,44	0/0:10,0:7:0.24:0,0,14	0/1:38,0:38:77.62:78,0,138	0/0:23,0:23:38.58:0,39,277	0/0:17,1:19:17.59:0,18,283	0/0:31,0:31:53.58:0,54,387	0/1:17,0:17:38.61:39,0,51	0/1:24,1:25:64.34:64,0,69	0/1:21,0:21:14.05:14,0,76	1/1:3,11:14:21.03:204,21,0	1/1:3,11:15:26.95:242,27,0	1/1:4,12:18:32.63:271,33,0	0/0:24,0:24:8.55:0,9,90	0/0:15,0:15:9.23:0,9,80	0/1:26,0:26:6.53:7,0,113	0/0:18,0:18:14.58:0,15,114	0/0:12,0:14:24.70:0,25,165	0/0:25,0:26:55.61:0,56,398	0/0:16,0:16:40.96:0,41,288	1/1:11,16:28:44.60:369,45,0	0/0:26,1:27:21.66:0,22,165	0/1:20,2:22:60.28:60,0,64	0/0:20,1:21:18.44:0,18,294	0/1:27,1:28:40.25:40,0,66	0/1:30,0:31:33.74:34,0,139	0/0:14,0:14:9.13:0,9,98
chr10	11578181	.	T	TA	4988.23	PASS	AB=0.682;AC=43;AF=0.796;AN=54;BaseQRankSum=-3.518;DP=418;FS=17.379;HRun=12;HaplotypeScore=41.8373;InbreedingCoeff=0.2999;MQ=46.46;MQ0=68;MQRankSum=-0.133;QD=12.86;ReadPosRankSum=-0.878;VQSLOD=2.5707;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:10,15:20:35.93:327,36,0	1/1:0,6:6:17.95:163,18,0	0/0:8,0:5:4.69:0,5,78	0/0:4,1:3:2.97:0,3,22	1/1:6,8:11:21.03:204,21,0	1/1:10,16:21:42.07:409,42,0	1/1:4,6:9:17.71:149,18,0	1/1:19,16:30:3.36:374,3,0	0/1:8,6:11:25.93:99,0,26	1/1:4,4:5:12.02:117,12,0	1/1:3,8:10:24.04:233,24,0	0/1:6,4:7:5.66:96,0,6	1/1:3,6:8:15.02:145,15,0	0/1:4,5:7:6.88:102,0,7	1/1:6,9:12:17.97:163,18,0	1/1:7,5:9:16.38:148,16,0	0/1:13,13:19:4.70:267,0,5	1/1:11,17:22:14.16:299,14,0	0/1:19,12:30:25.62:354,0,26	1/1:4,4:5:11.89:94,12,0	1/1:2,1:3:3:29,3,0	./.	1/1:3,3:3:6.01:58,6,0	1/1:2,5:6:15.02:144,15,0	0/0:15,0:14:37.34:0,37,267	1/1:6,16:18:38.23:387,38,0	1/1:9,19:22:30.05:292,30,0	1/1:5,13:14:35.89:334,36,0
chr10	11580662	.	GT	G	1511.93	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.407;DP=765;FS=0.000;HRun=5;HaplotypeScore=74.2619;InbreedingCoeff=0.9842;MQ=88.58;MQ0=0;MQRankSum=-3.938;QD=29.08;ReadPosRankSum=-0.698;VQSLOD=3.5156;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:61,0:60:99:0,163,2364	0/0:13,0:13:33.11:0,33,451	0/0:30,0:30:77.99:0,78,1022	0/0:34,0:34:77.58:0,78,1098	0/0:20,0:20:60.20:0,60,820	1/1:0,21:21:60.17:681,60,0	1/1:2,29:31:84.24:953,84,0	0/0:32,0:32:93.30:0,93,1258	0/0:31,0:31:87.26:0,87,1155	0/0:18,0:18:51.16:0,51,683	0/0:27,0:27:81.26:0,81,1091	0/0:28,0:28:75.25:0,75,1025	0/0:21,0:21:60.18:0,60,790	0/0:31,0:31:84.26:0,84,1132	0/0:34,0:34:99:0,99,1354	0/0:20,0:20:60.20:0,60,821	0/0:36,0:36:99:0,105,1417	0/0:35,0:35:96.30:0,96,1292	0/0:29,0:29:77.99:0,78,1038	0/0:33,0:33:90.29:0,90,1215	0/0:36,0:36:99:0,105,1435	0/0:24,0:24:66.20:0,66,873	0/0:24,0:24:69.19:0,69,894	0/0:24,0:24:72.24:0,72,984	0/0:21,0:21:60.20:0,60,821	0/0:28,0:28:84.26:0,84,1132	0/0:16,0:16:48.14:0,48,639	0/0:7,0:7:12.04:0,12,164
chr10	11581084	.	TG	T	5729.01	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=11.041;DP=625;FS=4.195;HRun=1;HaplotypeScore=60.7984;InbreedingCoeff=0.9998;MQ=84.40;MQ0=1;MQRankSum=-0.750;QD=38.71;ReadPosRankSum=-2.809;VQSLOD=4.2190;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,105,1678	0/0:10,0:10:30.10:0,30,478	0/0:18,0:18:51.17:0,51,815	0/0:21,0:21:34.09:0,34,842	0/0:32,0:32:96.33:0,96,1517	1/1:0,25:25:72.24:1005,72,0	1/1:0,14:14:33.11:462,33,0	1/1:0,36:36:99:1457,108,0	0/0:21,0:21:63.18:0,63,959	0/0:14,0:14:39.13:0,39,624	0/0:21,0:21:63.21:0,63,1006	0/0:22,0:22:66.23:0,66,1055	0/0:19,0:19:57.19:0,57,911	0/0:18,0:18:54.16:0,54,828	0/0:19,0:19:57.19:0,57,911	0/0:21,0:21:63.21:0,63,1007	0/0:18,0:18:51.13:0,51,763	0/0:30,0:30:84.24:0,84,1300	1/1:1,23:23:69.23:962,69,0	1/1:0,22:22:63.13:836,63,0	1/1:0,27:27:72.24:1007,72,0	0/0:19,0:19:57.18:0,57,888	0/0:23,0:23:66.21:0,66,1028	0/0:21,0:21:60.20:0,60,959	0/0:21,0:21:63.21:0,63,998	0/0:28,0:28:84.29:0,84,1334	0/0:28,0:27:84.27:0,84,1319	0/0:18,0:18:54.18:0,54,860
chr10	11582811	.	C	CTT	2389.25	PASS	AC=50;AF=0.926;AN=54;BaseQRankSum=2.260;DP=175;FS=13.047;HRun=2;HaplotypeScore=69.5479;InbreedingCoeff=0.3172;MQ=52.98;MQ0=0;MQRankSum=-0.685;QD=15.62;ReadPosRankSum=2.056;VQSLOD=-0.3562;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,8:9:20.78:146,21,0	1/1:1,1:2:2.94:18,3,0	0/0:7,0:1:1.55:0,2,4	0/0:9,0:8:3.53:0,4,31	1/1:12,0:12:2.94:18,3,0	1/1:1,9:10:29.24:192,29,0	1/1:1,4:4:8.72:50,9,0	1/1:4,10:14:32.95:273,33,0	1/1:0,3:3:8.72:50,9,0	1/1:2,11:13:29.94:240,30,0	1/1:1,11:12:29.94:231,30,0	1/1:1,2:3:8.83:56,9,0	1/1:1,5:6:17.65:111,18,0	1/1:0,4:4:11.79:76,12,0	1/1:1,9:10:29.46:187,29,0	1/1:0,2:2:5.88:37,6,0	1/1:1,5:6:11.86:82,12,0	1/1:1,2:3:2.99:24,3,0	1/1:0,1:1:2.99:24,3,0	1/1:5,0:5:6:73,6,0	./.	1/1:1,3:4:11.73:71,12,0	1/1:0,5:5:14.77:97,15,0	1/1:0,3:3:2.97:20,3,0	1/1:2,1:3:2.94:18,3,0	1/1:1,6:7:20.94:166,21,0	1/1:0,5:5:14.88:108,15,0	1/1:0,5:5:14.93:115,15,0
chr10	11583679	.	A	AC	97.94	PASS	AC=14;AF=0.636;AN=22;BaseQRankSum=-2.180;DP=74;FS=4.200;HRun=1;HaplotypeScore=28.6145;InbreedingCoeff=0.3423;MQ=106.26;MQ0=5;MQRankSum=-0.651;QD=4.45;ReadPosRankSum=-2.689;VQSLOD=-0.4083;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:2,0:2:0:0,0,0	./.	0/0:20,0:10:1.20:0,1,228	0/0:20,0:10:22.29:0,22,256	./.	./.	1/1:0,4:4:2.94:18,3,0	1/1:4,0:4:2.84:17,3,0	./.	1/1:1,1:2:3.01:45,3,0	./.	0/0:2,0:2:0:0,0,0	./.	./.	./.	./.	1/1:0,0:1:2.94:18,3,0	./.	./.	1/1:1,0:1:2.94:18,3,0	1/1:2,0:2:2.94:18,3,0	./.	./.	./.	1/1:8,0:8:5.49:53,5,0	./.	./.	./.
chr10	11583680	.	T	TA	3169.85	PASS	AB=0.990;AC=36;AF=0.643;AN=56;BaseQRankSum=-5.073;DP=551;FS=0.000;HRun=1;HaplotypeScore=642.1651;InbreedingCoeff=-0.1962;MQ=48.08;MQ0=5;MQRankSum=-0.154;QD=6.25;ReadPosRankSum=-0.963;VQSLOD=0.6667;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:15,0:15:4.36:57,0,4	0/1:14,0:14:9.67:38,0,10	0/0:20,1:11:0.14:0,0,228	0/0:22,0:11:8.35:0,8,218	0/1:24,0:24:19.82:20,0,28	0/1:11,0:11:3.09:3,0,11	1/1:25,0:25:23.19:227,23,0	1/1:22,0:22:49.42:460,49,0	0/1:17,0:17:2.90:92,0,3	1/1:37,0:37:40.90:449,41,0	0/1:16,0:16:19.91:20,0,27	0/1:25,0:25:1.46:138,0,1	1/1:18,0:18:1.02:177,1,0	0/1:28,0:28:13.11:129,0,13	1/1:26,0:26:12.87:189,13,0	1/1:29,0:29:21.93:263,22,0	1/1:14,0:14:18.74:132,19,0	0/1:6,0:6:2.50:18,0,3	0/1:8,0:8:3.39:49,0,3	0/1:19,0:19:6.03:81,0,6	1/1:17,0:17:5.91:104,6,0	0/1:23,0:23:31.06:60,0,31	0/1:25,0:25:15.33:69,0,15	1/1:12,0:12:0.09:35,0,0	0/1:21,5:26:9.65:133,0,10	0/1:22,0:22:1.50:103,0,2	0/1:18,0:18:5.64:115,0,6	1/1:10,0:10:19.12:156,19,0
chr10	11583735	.	T	TAC	14622.76	PASS	AB=0.703;AC=28;AF=0.500;AN=56;BaseQRankSum=-2.992;DP=1195;FS=2.566;HRun=0;HaplotypeScore=455.1966;InbreedingCoeff=0.5700;MQ=48.26;MQ0=8;MQRankSum=-5.312;QD=21.57;ReadPosRankSum=0.544;VQSLOD=3.6347;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:10,29:41:1.40:1147,0,1	1/1:8,9:20:40.60:541,41,0	0/0:62,0:40:39.27:0,39,470	0/0:54,0:38:31.81:0,32,494	1/1:23,21:47:63.15:1003,63,0	0/0:21,0:21:45.26:0,45,546	0/0:46,0:46:87.93:0,88,1096	0/0:46,0:46:13.15:0,13,641	1/1:8,29:39:49.07:1233,49,0	1/1:46,32:79:7.37:1588,7,0	1/1:16,15:36:40.76:736,41,0	0/0:46,0:48:95.16:0,95,1369	0/0:35,0:37:47.13:0,47,907	0/0:47,0:50:38.43:0,38,1086	1/1:16,27:44:44.13:1168,44,0	0/1:20,32:52:35.55:1419,0,36	1/1:6,24:30:38.85:1123,39,0	1/1:3,13:16:5.74:593,6,0	0/0:28,0:29:56.18:0,56,645	0/0:43,0:46:16.19:0,16,702	0/0:72,0:75:99:0,158,2033	0/1:49,0:57:34.19:34,0,864	1/1:32,15:48:54.80:933,55,0	0/1:6,25:33:60.29:1042,0,60	0/1:32,0:37:30.34:30,0,435	1/1:20,26:47:81.63:1226,82,0	0/1:21,10:37:33.72:504,0,34	1/1:7,6:12:22.31:304,22,0
chr10	11584231	.	AAG	A	3876.21	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=10.627;DP=685;FS=1.359;HRun=0;HaplotypeScore=80.0029;InbreedingCoeff=0.9999;MQ=67.33;MQ0=2;MQRankSum=-1.185;QD=39.15;ReadPosRankSum=-3.603;VQSLOD=4.2015;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,117,2188	0/0:16,0:16:48.14:0,48,857	0/0:23,0:20:53.94:0,54,916	0/0:24,0:24:63.18:0,63,1065	0/0:18,0:18:54.16:0,54,972	0/0:21,0:20:60.21:0,60,1122	0/0:28,0:28:78.25:0,78,1422	1/1:1,29:30:87.29:1281,87,0	0/0:22,0:22:63.20:0,63,1139	0/0:26,0:26:69.23:0,69,1265	0/0:18,0:18:54.19:0,54,1008	0/0:19,0:19:57.20:0,57,1067	0/0:17,0:17:48.16:0,48,895	0/0:27,0:27:75.21:0,75,1309	0/0:33,0:33:96.33:0,96,1796	0/0:20,0:20:54.19:0,54,991	0/0:36,0:36:99:0,102,1826	0/0:18,0:18:54.14:0,54,958	1/1:2,24:26:72.24:1055,72,0	1/1:0,23:23:66.13:922,66,0	1/1:2,18:20:42.14:618,42,0	0/0:30,0:30:90.31:0,90,1678	0/0:12,0:12:33.11:0,33,610	0/0:28,0:28:84.29:0,84,1546	0/0:24,0:24:72.25:0,72,1335	0/0:34,0:34:93.31:0,93,1709	0/0:37,0:37:99:0,105,1887	0/0:14,0:14:42.14:0,42,786
chr10	11586919	.	TG	T	3665.13	PASS	AB=0.813;AC=37;AF=0.661;AN=56;BaseQRankSum=1.070;DP=475;FS=2.597;HRun=2;HaplotypeScore=73.1230;InbreedingCoeff=0.9006;MQ=69.18;MQ0=19;MQRankSum=0.647;QD=11.90;ReadPosRankSum=2.125;VQSLOD=2.3686;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:33,4:38:36.69:421,37,0	1/1:9,1:9:19.27:167,19,0	0/0:27,0:13:22.89:0,23,159	0/0:29,0:16:26.63:0,27,181	1/1:19,2:21:30.41:270,30,0	0/0:17,0:16:40.27:0,40,465	0/0:7,0:7:17.63:0,18,203	0/0:29,0:29:71.39:0,71,640	0/1:9,3:13:0.67:4,0,1	1/1:18,3:21:31.89:264,32,0	1/1:13,1:14:25.86:173,26,0	1/1:8,0:8:23.81:188,24,0	1/1:7,1:10:29.68:233,30,0	1/1:6,0:7:20.96:186,21,0	1/1:14,1:15:25.63:202,26,0	1/1:12,1:13:19.86:211,20,0	1/1:19,21:39:4.78:173,5,0	1/1:22,3:23:38.84:272,39,0	0/0:18,0:17:35.22:0,35,337	0/0:13,0:12:15.21:0,15,152	0/0:13,0:12:27.13:0,27,274	1/1:8,1:9:20.91:182,21,0	1/1:8,0:8:11.18:79,11,0	1/1:5,2:7:11.93:107,12,0	0/0:13,0:13:32.14:0,32,295	1/1:15,3:20:46.80:416,47,0	1/1:7,7:14:8.31:53,8,0	1/1:7,0:6:6.02:65,6,0
chr10	11590319	.	GTGTTTGTT	G	13222.43	PASS	AC=48;AF=0.889;AN=54;BaseQRankSum=7.860;DP=609;FS=4.700;HRun=0;HaplotypeScore=169.6116;InbreedingCoeff=0.7984;MQ=58.99;MQ0=2;MQRankSum=-6.297;QD=25.53;ReadPosRankSum=3.732;VQSLOD=4.4282;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:18,22:40:36.12:913,36,0	1/1:7,5:12:12.51:305,13,0	0/0:24,0:18:24.08:0,24,716	0/0:35,0:29:33.58:0,34,1024	1/1:8,4:12:17.97:317,18,0	1/1:7,0:19:30.10:554,30,0	1/1:6,0:17:18.06:334,18,0	1/1:23,0:31:5.83:17,6,0	1/1:9,9:18:33.11:824,33,0	1/1:11,14:25:39.10:808,39,0	1/1:4,7:11:12.04:290,12,0	1/1:11,12:24:30.10:726,30,0	1/1:8,17:25:30.10:746,30,0	1/1:11,18:28:48.10:1159,48,0	1/1:4,16:19:27.09:685,27,0	1/1:7,27:34:66.23:1674,66,0	1/1:11,19:30:27.09:685,27,0	1/1:12,3:15:6.02:152,6,0	1/1:17,0:22:10.15:172,10,0	1/1:6,0:20:20.74:387,21,0	1/1:11,0:18:9.92:167,10,0	./.	1/1:4,8:12:6.02:152,6,0	1/1:19,3:22:8.56:215,9,0	0/0:20,0:20:45.15:0,45,1738	1/1:10,10:19:30.09:698,30,0	1/1:12,21:34:45.15:1141,45,0	1/1:8,0:8:6.02:100,6,0
chr10	11590325	.	GTT	G	1686.46	PASS	AB=0.962;AC=20;AF=0.357;AN=56;BaseQRankSum=17.691;DP=564;FS=0.000;HRun=3;HaplotypeScore=140.7893;InbreedingCoeff=-0.5635;MQ=51.93;MQ0=2;MQRankSum=-11.737;QD=4.21;ReadPosRankSum=4.544;VQSLOD=-0.1346;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:36,0:36:99:129,0,406	0/1:10,0:10:47.88:48,0,171	0/0:23,0:17:48.04:0,48,716	0/0:32,0:26:71.64:0,72,1146	0/1:11,1:12:99:151,0,178	0/1:16,0:16:51.15:51,0,134	0/1:17,0:17:20.26:20,0,224	0/0:25,0:25:45.74:0,46,781	0/1:17,1:18:99:102,0,230	0/1:24,0:24:99:197,0,306	0/1:10,0:10:74.64:75,0,187	0/1:21,0:21:99:114,0,251	0/1:23,0:23:99:116,0,172	0/1:27,1:28:99:159,0,230	0/1:19,1:19:93.93:95,0,94	0/1:33,0:33:99:170,0,179	0/1:27,0:27:48.74:49,0,294	0/0:13,0:13:13.98:0,14,355	0/0:21,0:21:22.04:0,22,557	0/1:18,0:18:27.72:28,0,182	0/0:16,0:16:8.53:0,9,357	0/0:12,0:12:15.05:0,15,214	0/1:11,0:11:27.21:27,0,121	0/1:17,2:19:48.68:49,0,349	0/0:21,0:21:63.22:0,63,1136	0/1:20,0:19:58.75:59,0,317	0/1:33,0:33:99:136,0,316	0/1:1,4:5:33.82:74,0,34
chr10	11592882	.	TGAGA	T	4212.30	PASS	AB=1.000;AC=32;AF=0.593;AN=54;BaseQRankSum=-1.232;DP=392;FS=0.000;HRun=0;HaplotypeScore=68.4748;InbreedingCoeff=0.6732;MQ=82.96;MQ0=18;MQRankSum=-1.198;QD=18.97;ReadPosRankSum=2.435;VQSLOD=4.0228;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:24:3.01:41,3,0	1/1:2,0:2:6.02:81,6,0	0/0:36,0:15:26.86:0,27,582	0/0:47,0:32:64.22:0,64,1067	0/0:11,0:11:0:0,0,0	0/0:13,0:13:0.89:0,1,2	1/1:15,0:15:8.90:60,9,0	1/1:1,24:25:63.06:930,63,0	1/1:13,0:13:9.03:122,9,0	1/1:0,9:9:27.09:411,27,0	0/1:5,0:5:0:0,0,0	0/0:13,0:13:17.51:0,18,301	0/0:9,0:9:18.31:0,18,235	0/0:8,0:8:9.50:0,10,125	0/0:8,0:8:0.47:0,0,1	1/1:4,0:4:9.03:133,9,0	1/1:18,0:18:3.01:41,3,0	1/1:15,0:15:6.02:80,6,0	0/1:12,0:11:2.40:344,0,2	1/1:7,0:7:8.94:66,9,0	1/1:33,0:31:36.23:888,36,0	0/0:4,0:4:4.26:0,4,40	./.	1/1:21,0:21:35.71:524,36,0	0/0:15,0:14:30.10:0,30,570	1/1:9,0:9:17.96:217,18,0	1/1:7,0:6:15.04:188,15,0	1/1:2,0:2:6.02:88,6,0
chr10	11592886	.	AGAGAGTGT	A	4440.32	PASS	AB=0.875;AC=32;AF=0.593;AN=54;BaseQRankSum=-2.623;DP=406;FS=3.388;HRun=0;HaplotypeScore=85.4871;InbreedingCoeff=0.4823;MQ=74.86;MQ0=23;MQRankSum=-0.509;QD=17.69;ReadPosRankSum=3.282;VQSLOD=3.3478;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,26:28:3.48:88,3,0	1/1:2,0:2:6.02:81,6,0	0/0:35,0:14:26.86:0,27,582	0/0:41,0:26:64.22:0,64,1067	1/1:1,10:11:2.74:12,3,0	0/0:15,0:15:0.47:0,0,1	1/1:15,0:15:9.03:144,9,0	1/1:29,0:27:26.58:890,27,0	1/1:1,11:12:0.16:166,0,0	1/1:9,0:9:27.09:411,27,0	0/1:0,5:5:0:0,0,0	0/0:11,0:11:27.07:0,27,473	0/0:14,0:14:37.47:0,37,603	0/0:9,0:8:9.50:0,10,198	0/0:0,8:8:0.47:0,0,1	1/1:4,0:4:9.03:133,9,0	1/1:0,18:18:3.01:88,3,0	1/1:1,1:15:6.02:108,6,0	0/1:14,0:13:99:311,0,234	0/1:7,0:7:53.71:54,0,55	0/1:31,0:38:99:769,0,220	0/0:5,0:5:3.46:0,3,39	./.	1/1:17,0:20:35.65:628,36,0	0/0:12,0:11:30.10:0,30,844	1/1:2,0:9:17.97:283,18,0	1/1:7,0:6:14.93:188,15,0	1/1:3,0:2:6.02:88,6,0
chr10	11592888	.	AGAGTGTGTGTGTGT	A	1277.15	PASS	AB=1.000;AC=20;AF=0.370;AN=54;BaseQRankSum=0.482;DP=411;FS=1.194;HRun=0;HaplotypeScore=120.2333;InbreedingCoeff=0.1260;MQ=72.26;MQ0=25;MQRankSum=1.892;QD=6.83;ReadPosRankSum=0.699;VQSLOD=2.4267;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:2.90:0,3,27	1/1:2,0:2:5.95:41,6,0	0/0:34,0:13:29.14:0,29,385	0/0:40,0:25:20.33:0,20,509	0/0:11,0:11:3.01:0,3,58	0/0:2,13:15:0:0,0,0	1/1:2,13:15:9.03:366,9,0	0/1:31,0:29:99:325,0,261	0/0:12,0:12:9.02:0,9,160	0/1:10,0:9:46.70:81,0,47	1/1:6,0:6:0.47:1,0,0	0/0:11,0:11:26.14:0,26,755	0/0:14,0:14:41.75:0,42,1210	0/0:8,0:7:9.45:0,9,312	0/0:9,0:9:3.46:0,3,25	1/1:4,0:4:8.94:67,9,0	0/0:18,0:18:3.01:0,3,30	1/1:14,0:14:5.46:29,5,0	0/1:15,0:14:99:106,0,758	0/1:6,0:6:7.87:8,0,259	0/1:45,0:41:99:192,0,1068	0/0:5,0:5:3.29:0,3,19	./.	0/1:21,0:21:74.33:109,0,74	0/0:13,0:12:32.95:0,33,1309	0/1:7,0:7:37.04:37,0,92	0/1:7,0:6:14.73:31,0,15	1/1:3,0:2:5.97:44,6,0
chr10	11592890	.	AGT	A	373.34	PASS	AB=1.000;AC=23;AF=0.605;AN=38;BaseQRankSum=4.863;DP=413;FS=0.000;HRun=0;HaplotypeScore=75.0367;InbreedingCoeff=0.5398;MQ=69.93;MQ0=26;MQRankSum=-1.033;QD=2.26;ReadPosRankSum=3.325;VQSLOD=1.4047;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:28:2.40:14,2,0	./.	./.	./.	1/1:11,0:11:2.84:14,3,0	./.	1/1:15,0:14:8.52:42,9,0	0/0:35,0:33:14.60:0,15,84	1/1:12,0:12:5.43:27,5,0	./.	0/1:6,0:6:0:0,0,0	1/1:5,5:11:13.79:99,14,0	1/1:13,1:14:0.03:155,0,0	1/1:5,2:7:5.76:63,6,0	0/0:9,0:9:1.55:0,2,4	./.	1/1:18,0:18:2.84:14,3,0	1/1:14,0:14:2.84:14,3,0	0/0:15,0:14:14.83:0,15,127	0/0:6,0:6:3.01:0,3,36	0/0:47,0:42:19.05:0,19,147	0/0:5,0:5:0:0,0,0	./.	1/1:20,0:20:10.24:46,10,0	0/0:13,0:12:14.09:0,14,177	1/1:7,0:7:4.41:15,4,0	./.	./.
chr10	11592934	.	AG	A	833.44	PASS	AB=0.667;AC=7;AF=0.125;AN=56;BaseQRankSum=6.525;DP=348;FS=9.211;HRun=7;HaplotypeScore=66.7041;InbreedingCoeff=0.8067;MQ=51.63;MQ0=13;MQRankSum=0.601;QD=16.34;ReadPosRankSum=2.484;VQSLOD=2.9235;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:14.98:0,15,156	0/0:2,0:2:6.02:0,6,75	0/0:20,0:9:27.08:0,27,333	0/0:21,0:14:32.43:0,32,355	0/0:10,0:10:21.02:0,21,244	0/0:13,0:13:6.02:0,6,76	0/0:14,0:14:26.99:0,27,281	0/0:12,0:11:17.97:0,18,190	0/0:11,0:11:21.05:0,21,246	0/0:2,0:2:6.02:0,6,76	0/0:8,0:8:9.03:0,9,113	1/1:0,23:22:51.99:518,52,0	1/1:5,8:13:27.05:272,27,0	1/1:5,8:11:17.91:183,18,0	0/0:16,0:16:36.09:0,36,424	0/0:11,0:11:21.07:0,21,262	0/0:18,0:18:42.09:0,42,503	0/0:10,0:9:15.05:0,15,182	0/0:12,0:11:33.11:0,33,413	0/0:5,0:4:12.04:0,12,151	0/0:29,1:26:48.15:0,48,601	0/1:1,1:1:0:0,0,0	0/0:7,0:7:18.06:0,18,219	0/0:16,0:16:23.66:0,24,227	0/0:10,0:10:24.08:0,24,302	0/0:10,0:10:24.08:0,24,302	0/0:10,0:10:24.03:0,24,282	0/0:6,0:4:12:0,12,121
chr10	11593118	.	C	CACAT	349.58	PASS	AB=0.952;AC=18;AF=0.321;AN=56;BaseQRankSum=5.386;DP=602;FS=13.833;HRun=0;HaplotypeScore=379.5536;InbreedingCoeff=-0.0733;MQ=39.67;MQ0=3;MQRankSum=-4.674;QD=1.08;ReadPosRankSum=-2.150;VQSLOD=0.0124;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,1:9:1.55:4,2,0	0/0:16,0:16:5.08:0,5,77	1/1:9,0:1:0.89:2,1,0	0/0:15,0:5:11.75:0,12,63	0/0:31,0:31:3.56:0,4,141	0/1:27,0:29:2.56:3,0,6	0/1:16,0:17:4.99:5,0,49	0/0:18,1:14:30.07:0,30,458	0/0:22,0:22:9.60:0,10,130	0/0:25,0:25:20.73:0,21,388	1/1:23,0:23:2.25:8,2,0	0/1:24,3:26:46.11:46,0,67	0/1:31,2:31:28.67:29,0,95	0/0:27,5:30:0.50:0,1,16	0/0:22,4:26:16.49:0,16,213	0/0:23,4:27:13.20:0,13,203	0/0:9,0:9:8.82:0,9,81	0/0:5,0:5:6.49:0,6,110	0/1:11,1:10:99:155,0,169	0/1:37,0:37:21.79:22,0,183	0/0:25,0:23:24.21:0,24,255	0/1:31,1:30:10.22:10,0,58	0/1:19,0:19:14.67:23,0,15	0/0:20,0:20:1.33:0,1,97	1/1:32,0:32:2.34:7,2,0	0/1:26,1:27:99:135,0,510	0/1:16,1:17:39.29:39,0,165	0/0:7,0:7:3.93:0,4,39
chr10	11593128	.	CATACAT	C	347.04	PASS	AB=0.991;AC=18;AF=0.321;AN=56;BaseQRankSum=6.698;DP=684;FS=33.812;HRun=0;HaplotypeScore=445.5300;InbreedingCoeff=-0.3155;MQ=40.52;MQ0=4;MQRankSum=-6.957;QD=0.82;ReadPosRankSum=-2.370;VQSLOD=0.6922;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:6.91:0,7,106	0/1:18,0:18:5.25:5,0,208	0/0:15,0:3:8.77:0,9,52	0/1:18,0:6:10.55:11,0,137	0/1:33,0:33:1.54:2,0,399	0/0:27,1:29:1.38:0,1,34	0/1:19,0:19:4.72:5,0,280	0/0:22,0:16:33.58:0,34,1045	0/0:21,1:22:20.22:0,20,626	0/1:27,1:28:7.28:7,0,1606	0/1:27,1:28:11.75:12,0,104	0/1:31,0:30:27.27:27,0,324	0/1:34,0:32:82.45:82,0,406	0/0:39,0:37:15.88:0,16,142	0/0:28,1:29:1.50:0,1,713	0/0:29,0:29:20.15:0,20,645	0/1:10,0:10:16.78:17,0,146	0/0:5,0:5:12.04:0,12,383	0/1:14,0:12:16.99:17,0,677	0/1:44,0:44:4.04:4,0,946	0/0:33,0:32:54.13:0,54,1407	0/1:35,0:35:51.59:72,0,52	0/1:21,0:21:44.13:44,0,99	0/0:21,0:21:18.75:0,19,384	0/1:33,0:34:31.57:32,0,300	0/1:27,0:27:23.14:23,0,1416	0/1:19,1:20:35.75:36,0,500	1/1:9,0:9:7.65:102,8,0
chr10	11593132	.	CAT	C	41.09	PASS	AB=0.987;AC=9;AF=0.161;AN=56;BaseQRankSum=7.400;DP=713;FS=30.725;HRun=0;HaplotypeScore=457.5938;InbreedingCoeff=0.0254;MQ=41.44;MQ0=4;MQRankSum=-7.474;QD=0.19;ReadPosRankSum=-1.574;VQSLOD=0.6304;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:16,1:17:0.61:0,1,54	0/0:18,0:19:10.99:0,11,128	0/0:17,0:3:5.79:0,6,30	0/1:20,1:9:4.82:5,0,110	0/0:32,0:33:11.77:0,12,226	0/0:31,0:31:3.94:0,4,79	0/0:19,0:19:11.61:0,12,227	0/0:26,0:20:42.09:0,42,753	0/0:22,0:22:20.47:0,20,396	0/0:31,0:31:32.57:0,33,938	0/1:28,0:28:5.87:6,0,51	0/0:30,0:29:18.44:0,18,251	0/1:35,0:33:7.88:8,0,195	0/0:40,0:38:8.75:0,9,110	0/0:30,0:30:20.83:0,21,452	0/0:32,0:32:20.12:0,20,391	0/0:10,0:10:10.94:0,11,145	0/0:6,0:6:15.05:0,15,271	0/0:14,0:12:13.69:0,14,367	0/0:43,0:43:35.76:0,36,668	0/0:35,0:33:56.97:0,57,1071	0/1:34,0:34:11.54:32,0,12	0/1:21,0:22:5.49:5,0,62	0/0:22,1:23:7.17:0,7,271	0/1:35,0:35:3.51:4,0,228	0/1:29,0:29:48.10:48,0,682	0/0:22,0:22:8.52:0,9,313	1/1:8,1:9:7.44:56,7,0
chr10	11593147	.	ACAG	A	2338.55	PASS	AB=0.991;AC=29;AF=0.518;AN=56;BaseQRankSum=8.555;DP=768;FS=18.383;HRun=0;HaplotypeScore=513.1340;InbreedingCoeff=-0.1650;MQ=45.49;MQ0=3;MQRankSum=-8.221;QD=3.70;ReadPosRankSum=-5.258;VQSLOD=-0.4337;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:17,1:18:4.80:45,0,5	0/1:19,0:19:30.32:34,0,30	0/1:18,0:4:10.94:11,0,83	0/1:28,0:15:67.55:68,0,79	0/0:37,0:37:5.98:0,6,32	0/1:30,1:31:6.37:12,0,6	0/1:24,1:25:12.74:63,0,13	0/1:20,0:17:37.59:114,0,38	0/1:25,0:25:9.12:9,0,36	0/1:35,0:35:74.17:195,0,74	0/1:27,0:27:0.74:57,0,1	1/1:12,22:33:26.18:386,26,0	1/1:26,17:41:31.06:440,31,0	1/1:14,26:37:12.04:205,12,0	0/1:33,0:33:14.05:14,0,43	0/0:35,0:35:14.54:0,15,56	0/1:11,0:11:3.23:52,0,3	0/0:7,0:7:12.48:0,12,43	0/1:12,0:11:1.63:2,0,39	0/1:47,0:46:17.84:18,0,91	0/0:34,1:33:45.22:0,45,161	1/1:25,11:34:5.09:186,5,0	1/1:23,0:23:2.14:69,2,0	0/0:22,0:22:5.59:0,6,33	0/1:40,0:40:29.04:83,0,29	0/1:33,0:32:34.58:337,0,35	0/1:24,0:24:15.34:15,0,36	1/1:9,0:9:11.07:89,11,0
chr10	11593149	.	AG	A	9707.49	PASS	AB=0.858;AC=54;AF=0.964;AN=56;BaseQRankSum=-2.928;DP=756;FS=8.843;HRun=1;HaplotypeScore=480.2580;InbreedingCoeff=-0.0050;MQ=46.67;MQ0=2;MQRankSum=1.114;QD=12.84;ReadPosRankSum=2.252;VQSLOD=1.7968;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,16:17:11.16:127,11,0	1/1:0,17:18:2.50:228,3,0	0/1:16,3:5:11.15:11,0,46	0/1:23,4:15:58.39:58,0,77	1/1:1,35:37:20.82:193,21,0	1/1:1,28:29:15.78:203,16,0	1/1:2,23:25:21.67:319,22,0	1/1:0,19:17:35.77:501,36,0	1/1:0,25:25:33.33:461,33,0	1/1:1,34:35:99:1356,99,0	1/1:0,25:25:14.59:134,15,0	1/1:22,12:33:25.06:172,25,0	1/1:17,25:40:38.04:317,38,0	1/1:28,13:38:16.06:65,16,0	1/1:0,33:33:29.27:372,29,0	1/1:0,35:35:23.77:336,24,0	1/1:0,11:11:15.44:196,15,0	1/1:0,7:7:15.05:210,15,0	1/1:0,10:10:27.09:377,27,0	1/1:4,42:45:35.57:642,36,0	1/1:1,33:32:57.89:800,58,0	1/1:14,22:34:9.51:105,10,0	1/1:0,21:22:8.66:156,9,0	1/1:1,20:21:24.06:335,24,0	1/1:8,32:40:26:295,26,0	1/1:0,33:32:84.85:1178,85,0	1/1:0,24:24:27.78:374,28,0	1/1:0,9:9:11.73:187,12,0
chr10	11593155	.	CAA	C	92.29	PASS	AB=0.861;AC=4;AF=0.071;AN=56;BaseQRankSum=9.542;DP=808;FS=53.567;HRun=5;HaplotypeScore=547.6287;InbreedingCoeff=-0.0961;MQ=47.12;MQ0=4;MQRankSum=-5.015;QD=0.88;ReadPosRankSum=5.964;VQSLOD=-0.2928;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,1:18:13.71:0,14,195	0/1:10,6:18:12.38:12,0,167	0/1:22,0:7:12.81:13,0,59	0/1:28,0:16:17.20:17,0,210	0/0:24,13:37:47.69:0,48,404	0/0:28,2:30:58.61:0,59,428	0/0:27,0:27:55:0,55,454	0/0:23,0:21:38.65:0,39,717	0/0:25,1:26:56.23:0,56,712	0/0:29,7:37:16.49:0,16,1257	0/0:19,8:27:14.11:0,14,199	0/0:34,2:35:67.50:0,68,569	0/0:41,3:42:40.94:0,41,582	0/0:42,5:44:95.94:0,96,647	0/0:29,4:33:69.59:0,70,783	0/0:33,4:37:84.01:0,84,819	0/0:11,0:12:16.08:0,16,198	0/0:8,0:8:15.86:0,16,323	0/0:12,0:12:32.73:0,33,535	0/0:38,8:46:63.48:0,63,907	0/0:42,0:40:93.14:0,93,1381	0/0:30,8:37:28.81:0,29,345	0/0:13,9:23:0.40:0,0,79	0/0:21,0:21:38.43:0,38,560	0/0:32,9:41:19.83:0,20,285	0/1:25,7:33:99:154,0,900	0/0:24,2:27:18.80:0,19,626	0/0:7,2:9:2.11:0,2,69
chr10	11593197	.	T	TACACATATAC	8802.12	PASS	AB=0.907;AC=27;AF=0.482;AN=56;BaseQRankSum=6.143;DP=1108;FS=50.870;HRun=0;HaplotypeScore=646.4211;InbreedingCoeff=0.5738;MQ=39.20;MQ0=14;MQRankSum=-10.255;QD=16.30;ReadPosRankSum=2.080;VQSLOD=0.0514;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:17,3:21:8.52:52,9,0	0/1:19,2:22:20.02:108,0,20	0/0:55,0:18:36.04:0,36,632	0/0:42,0:9:14.90:0,15,180	0/1:40,2:50:0.86:22,0,1	0/0:29,0:29:15.14:0,15,460	0/0:41,0:41:60.20:0,60,1543	0/0:50,0:43:83.70:0,84,1453	1/1:21,3:26:9.48:334,9,0	0/1:55,5:64:99:2920,0,181	1/1:27,5:37:3.77:39,4,0	0/0:41,0:40:36.10:0,36,1010	0/0:46,0:44:53.33:0,53,1956	0/0:49,0:46:42.26:0,42,1008	1/1:34,4:41:2.77:24,3,0	1/1:28,6:40:26.97:792,27,0	1/1:13,3:17:16.30:608,16,0	0/1:9,1:10:8.07:147,0,8	0/0:20,0:17:42.04:0,42,840	0/0:56,0:56:83.46:0,83,2049	0/0:78,0:76:99:0,150,3915	0/0:58,0:58:22.25:0,22,651	1/1:25,3:33:5.52:219,6,0	1/1:23,2:29:2.92:18,3,0	0/1:46,0:55:59.02:59,0,578	1/1:29,3:39:69:1653,69,0	1/1:26,5:36:38.51:1263,39,0	1/1:14,1:17:15.44:545,15,0
chr10	11593865	.	GGC	G	701.85	PASS	AB=0.953;AC=17;AF=0.304;AN=56;BaseQRankSum=6.300;DP=290;FS=1.190;HRun=0;HaplotypeScore=43.3174;InbreedingCoeff=-0.2132;MQ=69.23;MQ0=3;MQRankSum=-0.684;QD=3.71;ReadPosRankSum=2.079;VQSLOD=1.3644;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:12,3:15:32.14:170,0,32	0/0:2,0:2:5.93:0,6,40	0/1:20,1:8:12.95:13,0,97	0/0:26,0:12:23.82:0,24,214	0/0:5,0:5:8.45:0,8,90	0/0:5,0:5:6.43:0,6,46	0/1:19,0:19:9.24:9,0,34	0/0:13,0:13:11.56:0,12,94	0/1:11,0:11:14.80:59,0,15	0/1:12,2:14:42.49:110,0,42	0/0:3,0:3:2.97:0,3,21	0/0:10,0:10:11.52:0,12,85	0/1:8,0:8:27.48:27,0,61	0/1:9,0:9:41.58:42,0,58	0/0:9,0:9:13.79:0,14,95	0/1:11,0:11:42.58:44,0,43	0/1:22,0:22:59.67:83,0,60	0/0:4,0:4:3.94:0,4,38	0/0:6,0:6:9.82:0,10,105	0/0:3,0:3:2.51:0,3,44	0/1:18,2:20:57.49:57,0,68	0/0:6,0:6:8.95:0,9,67	1/1:5,0:5:10.82:86,11,0	0/1:15,0:15:16.83:93,0,17	0/0:9,0:8:13.11:0,13,109	0/1:8,0:8:1.36:1,0,92	0/1:7,2:9:31.07:53,0,31	1/1:1,0:1:2.04:6,2,0
chr10	11593878	.	GGA	G	668.03	PASS	AB=0.967;AC=20;AF=0.370;AN=54;BaseQRankSum=4.522;DP=320;FS=40.258;HRun=0;HaplotypeScore=49.4965;InbreedingCoeff=-0.4339;MQ=67.73;MQ0=4;MQRankSum=2.604;QD=2.78;ReadPosRankSum=7.347;VQSLOD=0.1639;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:17,1:18:76.38:76,0,102	./.	0/1:32,0:10:0.08:0,0,138	0/0:34,0:14:20.52:0,21,160	0/1:3,0:3:2.23:2,0,19	0/0:4,0:4:6:0,6,59	0/1:18,1:19:26.77:27,0,93	0/0:9,0:9:11.95:0,12,85	0/1:14,1:15:66.75:67,0,145	0/1:15,0:15:27.03:27,0,162	0/0:6,0:6:11:0,11,92	0/1:6,0:6:1.92:2,0,19	0/0:9,0:9:2.64:0,3,33	0/1:9,1:10:39.47:73,0,39	0/1:11,0:11:50.32:64,0,50	0/1:9,0:9:15.25:15,0,88	0/1:20,2:22:46.02:218,0,46	0/1:4,1:5:6.48:22,0,6	0/1:3,0:3:15.37:15,0,44	0/1:7,0:7:0.79:1,0,76	0/1:20,2:22:80.12:80,0,113	0/0:4,0:4:2.99:0,3,24	0/1:8,0:8:25.30:25,0,52	0/1:18,0:18:38:38,0,97	0/0:7,0:6:2.83:0,3,51	0/0:7,0:7:5.92:0,6,67	0/1:16,0:16:23.73:24,0,183	1/1:1,0:1:3.01:32,3,0
chr10	11594754	.	CT	C	64.72	PASS	AB=0.811;AC=2;AF=0.036;AN=56;BaseQRankSum=8.726;DP=716;FS=0.000;HRun=3;HaplotypeScore=148.9387;InbreedingCoeff=-0.0489;MQ=60.35;MQ0=9;MQRankSum=-5.948;QD=1.47;ReadPosRankSum=0.356;VQSLOD=-0.5875;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:54.16:0,54,807	0/0:7,0:7:4.73:0,5,94	0/0:54,0:27:69.05:0,69,990	0/0:41,0:22:41.63:0,42,548	0/0:29,0:29:72.22:0,72,1056	0/1:16,3:19:68.03:68,0,703	0/0:19,0:18:54.18:0,54,859	0/0:30,0:30:87.30:0,87,1387	0/0:29,0:29:36.12:0,36,567	0/0:24,0:24:56.99:0,57,916	0/0:23,0:23:54.16:0,54,795	0/0:22,6:28:19.56:0,20,950	0/1:17,8:25:85.31:85,0,697	0/0:11,3:14:5.49:0,5,471	0/0:17,0:17:15.05:0,15,235	0/0:26,0:26:21.02:0,21,286	0/0:24,0:24:26.96:0,27,349	0/0:21,0:21:50.13:0,50,842	0/0:21,0:20:57.16:0,57,841	0/0:26,0:26:75.26:0,75,1199	0/0:13,0:13:39.13:0,39,621	0/0:17,5:22:10.98:0,11,743	0/0:31,0:31:60.63:0,61,864	0/0:31,0:31:19.74:0,20,373	0/0:28,0:28:84.25:0,84,1290	0/0:28,0:28:84.28:0,84,1307	0/0:21,0:21:30.10:0,30,466	0/0:27,0:27:27.09:0,27,419
chr10	11594763	.	T	TTTTC	10225.01	PASS	AB=1.000;AC=47;AF=0.839;AN=56;BaseQRankSum=-0.767;DP=678;FS=7.613;HRun=0;HaplotypeScore=138.8536;InbreedingCoeff=0.5364;MQ=58.58;MQ0=11;MQRankSum=1.095;QD=17.78;ReadPosRankSum=0.535;VQSLOD=4.0587;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:32:29.39:243,29,0	1/1:8,0:8:3.48:80,3,0	0/0:41,0:20:32.81:0,33,312	0/0:34,0:18:26.36:0,26,182	1/1:26,1:28:59.44:576,59,0	0/1:18,0:18:16.92:312,0,17	1/1:16,0:15:41.81:363,42,0	1/1:27,0:27:76.78:709,77,0	1/1:27,2:29:23.95:493,24,0	1/1:27,0:27:74.05:794,74,0	1/1:20,0:20:35.63:311,36,0	1/1:26,0:26:39.02:577,39,0	1/1:25,0:25:63.78:580,64,0	1/1:14,0:14:35.05:301,35,0	1/1:16,0:16:5.90:116,6,0	1/1:29,0:29:17.95:323,18,0	1/1:28,0:28:6.91:123,7,0	1/1:18,0:18:53.93:591,54,0	0/1:21,0:19:11.50:259,0,11	0/1:28,0:28:99:382,0,107	1/1:13,0:12:27:239,27,0	1/1:21,0:21:48.56:478,49,0	1/1:25,1:26:29.80:374,30,0	1/1:34,0:34:14.90:145,15,0	0/0:27,0:27:78.19:0,78,1222	1/1:1,24:27:75.09:1052,75,0	1/1:3,19:22:20.66:487,21,0	1/1:2,20:22:12.04:319,12,0
chr10	11594764	.	T	TTTCTTTCC	13580.15	PASS	AB=1.000;AC=47;AF=0.839;AN=56;BaseQRankSum=-0.671;DP=692;FS=9.836;HRun=0;HaplotypeScore=168.1804;InbreedingCoeff=0.5953;MQ=58.46;MQ0=11;MQRankSum=-0.732;QD=22.98;ReadPosRankSum=1.053;VQSLOD=3.6778;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:30:32.30:407,32,0	1/1:2,7:9:6.49:168,6,0	0/0:40,0:18:33.92:0,34,324	0/0:34,0:18:23.99:0,24,167	1/1:4,25:30:59.44:762,59,0	1/1:19,0:19:50.29:457,50,0	1/1:16,0:15:41.81:363,42,0	1/1:28,0:28:75.53:706,76,0	1/1:5,22:32:23.95:1046,24,0	1/1:1,24:30:83.89:1425,84,0	1/1:2,16:20:35.63:436,36,0	1/1:18,0:24:58.42:783,58,0	1/1:19,0:25:72.03:909,72,0	1/1:12,0:14:38.99:430,39,0	1/1:3,0:19:12.04:338,12,0	1/1:3,28:34:27.46:883,27,0	1/1:4,23:28:6.91:263,7,0	1/1:18,0:18:50.92:646,51,0	0/1:21,0:19:95.07:258,0,95	0/1:28,0:28:99:381,0,353	1/1:12,0:11:27:239,27,0	1/1:16,0:20:57:653,57,0	1/1:4,23:29:32.80:706,33,0	1/1:3,29:36:14.92:260,15,0	0/0:27,0:27:81.18:0,81,1678	1/1:26,0:26:54.61:719,55,0	0/1:21,0:21:1.04:187,0,1	1/1:22,0:22:12.04:157,12,0
chr10	11595313	.	AT	A	1395.28	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=9.921;DP=632;FS=0.000;HRun=9;HaplotypeScore=58.9423;InbreedingCoeff=0.9686;MQ=67.38;MQ0=1;MQRankSum=1.314;QD=19.11;ReadPosRankSum=1.718;VQSLOD=3.9556;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,114,1304	0/0:10,0:10:30.09:0,30,346	0/0:7,0:6:9.03:0,9,101	0/0:13,0:12:9.95:0,10,265	0/0:29,0:29:78.23:0,78,898	0/0:30,0:30:81.23:0,81,925	0/0:27,0:27:66.20:0,66,762	0/0:25,0:25:60.07:0,60,674	0/0:23,0:24:66.01:0,66,731	0/0:22,0:22:60.18:0,60,693	0/0:22,0:22:63.18:0,63,717	1/1:1,17:18:39.02:357,39,0	1/1:3,22:25:56.96:512,57,0	1/1:1,16:17:42.02:384,42,0	0/0:26,0:26:66.20:0,66,762	0/0:32,0:32:93.26:0,93,1064	0/0:29,0:28:75.21:0,75,856	0/0:29,0:29:78.22:0,78,889	0/0:20,0:20:48.12:0,48,542	0/0:23,0:23:69.21:0,69,796	0/0:21,0:21:54.16:0,54,623	1/1:2,11:13:33.01:302,33,0	0/0:23,0:23:63.13:0,63,692	0/0:19,0:19:57.16:0,57,649	0/0:17,0:17:45.13:0,45,519	0/0:29,0:29:81.23:0,81,927	0/0:34,1:35:77.82:0,78,1127	0/0:7,0:7:18.05:0,18,208
chr10	11596668	.	AT	A	7250.96	PASS	AB=0.784;AC=50;AF=0.893;AN=56;BaseQRankSum=0.519;DP=630;FS=0.000;HRun=12;HaplotypeScore=84.6895;InbreedingCoeff=0.6095;MQ=70.60;MQ0=2;MQRankSum=-2.328;QD=12.33;ReadPosRankSum=4.307;VQSLOD=4.8730;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,37:43:99:812,105,0	1/1:1,7:8:20.92:163,21,0	0/0:22,0:18:35.83:0,36,313	0/1:16,0:13:7.06:7,0,85	1/1:9,22:32:48.30:474,48,0	1/1:2,1:22:39.65:129,40,0	1/1:5,0:30:44.81:129,45,0	1/1:6,1:28:44.60:143,45,0	1/1:3,18:21:53.79:418,54,0	1/1:5,17:23:16.36:301,16,0	0/1:5,16:21:7.09:318,0,7	1/1:6,0:27:40.72:118,41,0	1/1:5,0:15:20.34:59,20,0	1/1:0,0:16:28.52:82,29,0	1/1:4,26:31:73.76:563,74,0	1/1:5,21:26:59.76:464,60,0	1/1:5,26:31:23.70:544,24,0	1/1:10,22:32:32.29:434,32,0	1/1:3,0:14:20.46:57,20,0	1/1:3,0:17:28.50:82,29,0	1/1:0,0:15:24.44:71,24,0	1/1:3,0:16:25.23:78,25,0	1/1:5,9:16:0.50:167,0,0	1/1:0,17:17:47.82:372,48,0	0/0:19,0:20:47.92:0,48,464	1/1:2,25:26:44.27:527,44,0	1/1:3,21:26:39.38:469,39,0	1/1:3,13:16:11.38:271,11,0
chr10	11599142	.	AT	A	4136.17	PASS	AB=0.824;AC=36;AF=0.643;AN=56;BaseQRankSum=5.702;DP=461;FS=9.634;HRun=13;HaplotypeScore=76.7744;InbreedingCoeff=0.5625;MQ=69.18;MQ0=1;MQRankSum=-3.666;QD=11.43;ReadPosRankSum=2.363;VQSLOD=2.9216;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:9,14:23:17.40:260,17,0	1/1:0,6:6:17.90:131,18,0	0/0:11,0:9:17.90:0,18,152	0/1:13,0:12:15.13:15,0,47	1/1:6,17:25:22.60:309,23,0	1/1:6,15:21:46.76:334,47,0	1/1:5,12:17:12.94:218,13,0	0/0:21,0:25:38.94:0,39,323	1/1:4,8:12:23.79:175,24,0	1/1:10,9:20:34.77:245,35,0	0/1:3,14:18:11.54:243,0,12	0/0:9,0:10:23.85:0,24,207	0/1:15,2:17:7.76:8,0,247	0/0:11,0:11:24.03:0,24,228	0/0:12,0:13:32.86:0,33,292	1/1:6,6:12:20.85:152,21,0	1/1:6,19:25:59.37:437,59,0	1/1:6,14:20:41.69:306,42,0	0/1:15,4:19:33.26:33,0,302	0/1:8,2:11:26.63:27,0,118	0/0:8,0:8:15.01:0,15,140	0/1:15,2:17:1.75:2,0,308	1/1:7,8:15:6.58:208,7,0	1/1:9,12:21:38.45:282,38,0	0/0:18,1:21:50.91:0,51,477	1/1:5,15:20:18.53:299,19,0	1/1:10,10:20:41.59:299,42,0	1/1:2,8:10:20.87:153,21,0
chr10	11599167	.	A	AT	5999.19	PASS	AB=0.947;AC=32;AF=0.571;AN=56;BaseQRankSum=0.240;DP=471;FS=0.828;HRun=10;HaplotypeScore=74.9548;InbreedingCoeff=0.8030;MQ=66.07;MQ0=2;MQRankSum=-5.919;QD=20.06;ReadPosRankSum=1.119;VQSLOD=5.7444;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,19:23:35.68:582,36,0	1/1:3,4:7:12.03:128,12,0	0/1:19,0:8:12.36:12,0,35	0/0:17,0:15:2.66:0,3,122	1/1:6,18:25:38.36:584,38,0	0/0:20,0:20:44.87:0,45,366	0/0:18,0:18:38.94:0,39,319	0/0:29,0:30:61.93:0,62,497	1/1:3,13:17:44.94:454,45,0	1/1:6,10:16:36.08:378,36,0	1/1:4,19:23:36.37:568,36,0	0/0:12,0:12:23.93:0,24,197	0/1:15,2:17:21.88:22,0,246	0/0:13,0:13:38.95:0,39,318	1/1:2,13:15:36.09:384,36,0	1/1:3,11:14:33.08:351,33,0	1/1:5,19:24:23.48:455,23,0	1/1:9,15:24:50.73:488,51,0	0/0:14,0:14:22.77:0,23,175	0/0:9,0:9:17.97:0,18,148	0/0:5,0:5:8.98:0,9,74	0/0:15,0:15:38.85:0,39,311	1/1:4,11:16:34.35:327,34,0	1/1:4,11:15:24.06:256,24,0	0/0:18,0:18:41.93:0,42,344	1/1:3,14:17:48.10:498,48,0	1/1:6,14:20:44.47:448,44,0	1/1:5,2:7:6.02:64,6,0
chr10	11599574	.	G	GA	2067.65	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-8.185;DP=541;FS=5.180;HRun=9;HaplotypeScore=57.5829;InbreedingCoeff=0.9022;MQ=72.69;MQ0=2;MQRankSum=-0.935;QD=26.17;ReadPosRankSum=-4.052;VQSLOD=2.6887;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,120,1035	0/0:6,0:6:15:0,15,130	0/0:17,0:11:3.11:0,3,48	0/0:20,0:17:2.72:0,3,107	0/0:19,0:19:29.97:0,30,260	0/0:17,0:17:44.95:0,45,382	0/0:25,0:25:62.32:0,62,525	1/1:5,20:25:60.14:654,60,0	0/0:11,0:11:32.99:0,33,287	0/0:15,0:16:44.02:0,44,371	0/0:24,0:24:56.97:0,57,494	0/0:18,0:18:50.99:0,51,442	0/0:21,0:21:55.79:0,56,474	0/0:14,0:14:41.99:0,42,364	0/0:30,0:30:80.93:0,81,693	0/0:21,0:21:53.97:0,54,465	0/0:23,0:23:59.98:0,60,521	0/0:17,0:17:22.17:0,22,319	1/1:3,16:21:53.79:549,54,0	1/1:1,21:22:66.18:726,66,0	1/1:2,9:11:27.07:299,27,0	0/0:9,0:9:26.99:0,27,234	0/0:18,0:18:50.99:0,51,443	0/0:18,1:19:47.78:0,48,408	0/0:10,0:10:29.98:0,30,256	0/0:23,0:23:62.97:0,63,547	0/0:27,0:27:71.94:0,72,617	0/0:13,0:13:38.99:0,39,338
chr10	11600403	.	C	CTCCTCCTCTTCT	9596.75	PASS	AB=0.667;AC=29;AF=0.537;AN=54;BaseQRankSum=-4.316;DP=627;FS=0.445;HRun=0;HaplotypeScore=199.3158;InbreedingCoeff=0.8120;MQ=56.63;MQ0=13;MQRankSum=-3.561;QD=26.29;ReadPosRankSum=0.309;VQSLOD=4.0352;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:19:26.96:306,27,0	1/1:3,8:12:3.01:174,3,0	./.	0/0:16,0:14:2.99:0,3,23	1/1:10,12:23:11.93:145,12,0	0/0:24,0:24:45.07:0,45,872	0/0:20,0:20:33.04:0,33,460	0/0:32,0:27:23.76:0,24,166	1/1:16,0:15:27.49:656,27,0	1/1:28,0:26:63.18:1428,63,0	1/1:10,23:36:44.70:650,45,0	0/0:16,0:16:33.05:0,33,562	0/0:16,0:16:24.05:0,24,550	0/0:16,0:16:27.06:0,27,677	1/1:10,22:35:6.49:259,6,0	1/1:9,18:29:0.42:171,0,0	1/1:22,0:22:13.64:591,14,0	0/1:7,6:14:8.64:160,0,9	0/0:32,0:28:23.94:0,24,417	0/0:28,0:28:59.87:0,60,1207	0/0:18,0:18:26.92:0,27,571	0/0:18,0:18:36.10:0,36,963	1/1:27,0:27:51.07:942,51,0	1/1:7,5:14:5.95:47,6,0	0/0:21,0:21:42.08:0,42,999	1/1:31,0:31:72.19:1814,72,0	1/1:29,0:29:63.16:1535,63,0	1/1:29,0:25:27.08:718,27,0
chr10	11600421	.	CTCT	C	2210.30	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=5.929;DP=622;FS=5.377;HRun=0;HaplotypeScore=126.5307;InbreedingCoeff=0.8441;MQ=53.16;MQ0=13;MQRankSum=1.523;QD=19.05;ReadPosRankSum=-0.250;VQSLOD=3.1261;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:15.63:0,16,594	0/0:12,0:12:8.81:0,9,171	0/0:12,0:4:11.92:0,12,127	0/0:30,0:7:11.59:0,12,187	0/0:25,0:24:44.96:0,45,590	0/0:22,0:22:57.18:0,57,1117	0/0:19,0:19:48.13:0,48,870	1/1:35,0:31:57.39:563,57,0	0/0:13,0:12:24.08:0,24,346	0/0:28,0:26:49.38:0,49,996	0/0:34,0:34:54.63:0,55,1001	0/0:14,0:14:39.13:0,39,777	0/0:12,0:12:36.10:0,36,654	0/0:14,0:14:39.10:0,39,690	0/0:30,0:30:20.99:0,21,236	0/0:28,0:28:17.99:0,18,236	0/0:27,0:27:74.12:0,74,1380	0/0:13,0:13:11.91:0,12,116	1/1:8,17:21:33.37:557,33,0	1/1:3,24:27:62.59:855,63,0	1/1:3,14:17:28.34:391,28,0	0/0:19,0:19:57.16:0,57,1108	0/0:22,0:22:54.51:0,55,946	0/1:12,0:12:6.83:7,0,83	0/0:26,0:26:75.20:0,75,1389	0/0:32,0:32:80.43:0,80,1503	0/0:32,0:32:70.41:0,70,1263	0/0:21,0:19:19.31:0,19,380
chr10	11600436	.	CTCT	C	2199.71	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=5.343;DP=638;FS=8.484;HRun=0;HaplotypeScore=129.4685;InbreedingCoeff=0.8920;MQ=53.12;MQ0=15;MQRankSum=3.998;QD=20.95;ReadPosRankSum=-0.092;VQSLOD=3.2483;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:30.03:0,30,583	0/0:8,0:8:1.98:0,2,133	0/0:39,0:18:40.36:0,40,618	0/0:42,0:12:26.73:0,27,393	0/0:22,0:22:42.08:0,42,714	0/0:22,0:22:54.13:0,54,962	0/0:13,0:13:33.11:0,33,654	1/1:16,25:38:72.94:708,73,0	0/0:14,0:14:27.56:0,28,420	0/0:31,0:28:57.44:0,57,1120	0/0:30,0:30:57.65:0,58,1141	0/0:18,0:18:45.14:0,45,864	0/0:12,0:12:27.08:0,27,505	0/0:10,0:10:27.08:0,27,529	0/0:26,0:26:15:0,15,249	0/0:20,0:20:14.92:0,15,254	0/0:29,0:29:81.22:0,81,1523	0/0:14,0:14:25.51:0,26,247	1/1:22,0:19:33.57:446,34,0	1/1:27,0:27:29.78:791,30,0	1/1:15,0:15:30.09:413,30,0	0/0:21,0:21:60.19:0,60,1195	0/0:23,0:23:57.01:0,57,994	0/0:11,0:11:5.50:0,6,135	0/0:24,0:24:69.20:0,69,1263	0/0:34,0:34:87.50:0,88,1606	0/0:33,0:33:70.95:0,71,1370	0/0:18,0:16:8.80:0,9,287
chr10	11601679	.	CT	C	5887.64	PASS	AB=0.871;AC=41;AF=0.732;AN=56;BaseQRankSum=5.720;DP=494;FS=8.221;HRun=12;HaplotypeScore=60.0703;InbreedingCoeff=0.6235;MQ=76.97;MQ0=0;MQRankSum=-0.917;QD=14.61;ReadPosRankSum=1.912;VQSLOD=5.3062;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,15:19:41.80:325,42,0	1/1:3,10:13:26.89:209,27,0	0/0:14,0:13:9.28:0,9,141	0/1:14,0:13:3.19:3,0,17	1/1:2,8:11:25.94:192,26,0	0/0:20,0:22:53.78:0,54,516	0/0:8,0:8:21.04:0,21,213	1/1:8,23:32:43.25:503,43,0	1/1:3,11:15:31.41:237,31,0	1/1:4,13:18:37.86:284,38,0	1/1:4,18:22:26.32:387,26,0	0/0:25,0:26:65.28:0,65,689	0/0:20,1:21:36.85:0,37,542	0/1:6,0:6:8.10:8,0,107	1/1:6,15:22:16.40:300,16,0	1/1:2,14:16:41.84:325,42,0	1/1:5,14:19:38.80:302,39,0	1/1:1,7:8:17.92:139,18,0	1/1:3,15:19:46.85:354,47,0	1/1:3,18:23:29.91:379,30,0	1/1:1,7:9:22.95:169,23,0	0/1:13,3:17:21.83:22,0,320	1/1:3,14:17:14.37:295,14,0	1/1:1,4:5:11.95:93,12,0	0/1:14,1:16:0.10:0,0,324	1/1:1,21:22:62.75:488,63,0	1/1:6,28:33:19.45:478,19,0	0/1:6,20:26:22.59:396,0,23
chr10	11603117	.	CA	C	655.82	PASS	AB=0.602;AC=2;AF=0.036;AN=56;BaseQRankSum=4.018;DP=635;FS=16.150;HRun=1;HaplotypeScore=106.9684;InbreedingCoeff=-0.0371;MQ=64.10;MQ0=0;MQRankSum=-5.857;QD=21.16;ReadPosRankSum=-1.503;VQSLOD=2.2989;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,144,2238	0/0:10,0:10:30.10:0,30,470	0/0:22,0:19:57.10:0,57,826	0/0:24,0:21:41.86:0,42,781	0/0:13,0:13:39.12:0,39,590	0/1:8,11:19:99:405,0,281	0/1:3,9:12:99:339,0,106	0/0:38,0:38:99:0,108,1702	0/0:23,0:23:69.22:0,69,1075	0/0:17,0:17:51.16:0,51,770	0/0:21,0:20:63.20:0,63,962	0/0:37,0:37:99:0,111,1703	0/0:17,0:17:48.16:0,48,767	0/0:21,0:21:63.20:0,63,983	0/0:29,0:29:87.27:0,87,1342	0/0:34,0:34:99:0,102,1577	0/0:28,0:28:81.23:0,81,1266	0/0:24,0:24:69.20:0,69,1058	0/0:21,0:21:60.20:0,60,930	0/0:17,0:17:51.14:0,51,739	0/0:29,0:29:84.29:0,84,1333	0/0:21,0:21:63.21:0,63,1004	0/0:13,0:13:39.13:0,39,613	0/0:23,0:23:69.22:0,69,1076	0/0:19,0:19:57.19:0,57,893	0/0:20,0:20:60.19:0,60,932	0/0:25,0:24:75.23:0,75,1152	0/0:9,0:9:24.06:0,24,359
chr10	11605482	.	G	GTTCTCTCTCTCTCTCTCTCT	23211.77	PASS	AB=1.000;AC=42;AF=0.778;AN=54;BaseQRankSum=-0.180;DP=537;FS=6.682;HRun=0;HaplotypeScore=300.5174;InbreedingCoeff=0.6795;MQ=70.00;MQ0=7;MQRankSum=-4.977;QD=56.89;ReadPosRankSum=0.107;VQSLOD=3.2134;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:17:2.58:809,3,0	1/1:9,0:9:18.05:813,18,0	0/0:29,0:22:26.49:0,26,748	0/0:24,0:24:15.68:0,16,661	1/1:18,0:17:21.07:1556,21,0	1/1:23,0:23:42.21:296,42,0	1/1:18,0:17:11.79:115,12,0	1/1:29,0:29:29.33:660,29,0	1/1:20,0:20:27.09:2236,27,0	1/1:22,0:21:36.08:1534,36,0	1/1:12,0:11:12.04:768,12,0	0/0:24,0:24:2.02:0,2,300	0/1:22,0:22:3.30:3,0,244	0/0:19,0:19:23.81:0,24,168	1/1:30,0:30:39.13:3012,39,0	1/1:21,0:21:27.09:2080,27,0	1/1:12,0:11:18.06:1165,18,0	1/1:6,0:6:12.04:788,12,0	1/1:20,0:20:39.12:768,39,0	1/1:28,0:27:60.14:1122,60,0	1/1:13,0:13:9.03:170,9,0	0/1:17,0:17:27.49:27,0,87	1/1:18,0:17:27.09:2106,27,0	1/1:11,2:15:3.01:264,3,0	0/0:28,0:28:63.22:0,63,2781	1/1:17,0:17:27.09:1729,27,0	1/1:20,0:19:15.05:1190,15,0	./.
chr10	11605483	.	T	TTCTCTC	16823.13	PASS	AB=0.980;AC=50;AF=0.893;AN=56;BaseQRankSum=4.605;DP=725;FS=0.666;HRun=0;HaplotypeScore=253.4704;InbreedingCoeff=0.5656;MQ=61.82;MQ0=7;MQRankSum=-8.284;QD=25.22;ReadPosRankSum=0.278;VQSLOD=4.3852;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:24:12.04:300,12,0	1/1:13,0:12:11.95:182,12,0	0/0:29,0:22:26.29:0,26,449	0/1:23,0:23:41.93:42,0,279	1/1:30,0:31:14.63:351,15,0	1/1:12,0:28:51.65:1308,52,0	1/1:17,0:19:9.03:201,9,0	1/1:34,0:43:53.17:1144,53,0	1/1:26,0:32:24.08:604,24,0	1/1:33,0:32:42.10:900,42,0	1/1:23,0:24:12.04:266,12,0	1/1:10,16:28:54.18:1744,54,0	1/1:8,14:23:45.15:1361,45,0	1/1:8,12:21:24.08:802,24,0	1/1:34,0:43:27.09:709,27,0	1/1:30,0:32:30.10:690,30,0	1/1:17,0:20:24.08:595,24,0	0/1:9,0:9:1.99:265,0,2	1/1:22,0:28:39.13:994,39,0	1/1:15,0:34:48.16:1239,48,0	1/1:15,0:15:3.01:64,3,0	1/1:9,11:22:27.09:844,27,0	1/1:25,0:26:15.05:370,15,0	1/1:21,0:21:9.03:166,9,0	0/0:29,0:29:63.22:0,63,1348	1/1:22,0:22:24.08:560,24,0	1/1:27,0:31:33.11:821,33,0	1/1:8,0:8:12.04:305,12,0
chr10	11609143	.	GA	G	844.24	PASS	AB=0.730;AC=8;AF=0.143;AN=56;BaseQRankSum=5.981;DP=543;FS=6.016;HRun=11;HaplotypeScore=59.2997;InbreedingCoeff=0.5786;MQ=65.09;MQ0=9;MQRankSum=1.192;QD=9.59;ReadPosRankSum=-2.499;VQSLOD=1.9158;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:69.12:0,69,714	0/0:3,0:4:8.24:0,8,71	0/1:14,2:10:57.71:58,0,90	0/0:18,0:11:6.82:0,7,132	0/0:25,0:25:35.72:0,36,551	0/0:23,0:23:63.16:0,63,672	0/0:20,0:20:51.13:0,51,544	1/1:8,9:16:15.46:209,15,0	0/0:25,1:27:32.32:0,32,472	0/0:21,0:21:57.13:0,57,597	0/0:14,1:13:24.05:0,24,248	0/0:28,0:28:78.16:0,78,819	0/0:16,0:16:39.10:0,39,416	0/0:14,0:15:41.93:0,42,424	0/0:24,0:24:66.16:0,66,698	0/0:15,0:15:36.08:0,36,375	0/0:25,0:24:57.13:0,57,600	0/0:27,1:27:47.50:0,47,698	1/1:4,10:13:2.54:218,3,0	1/1:3,14:16:28.78:226,29,0	0/1:6,18:23:19.04:275,0,19	0/0:13,0:13:21.52:0,22,225	0/0:15,0:14:35.66:0,36,346	0/0:12,1:15:14.60:0,15,325	0/0:18,0:17:35.89:0,36,349	0/0:23,1:24:35.22:0,35,532	0/0:18,1:19:39.10:0,39,414	0/0:9,3:12:5.35:0,5,263
chr10	11609157	.	C	CA	306.76	PASS	AB=0.842;AC=2;AF=0.036;AN=56;BaseQRankSum=-1.302;DP=547;FS=6.992;HRun=6;HaplotypeScore=63.1366;InbreedingCoeff=-0.0366;MQ=73.02;MQ0=4;MQRankSum=0.139;QD=6.26;ReadPosRankSum=0.240;VQSLOD=-0.2422;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:81.18:0,81,826	0/0:3,0:3:6.01:0,6,61	0/0:21,0:15:35.86:0,36,319	0/1:23,0:16:5.29:5,0,103	0/0:26,0:26:69.13:0,69,695	0/0:24,0:24:69.15:0,69,703	0/0:19,0:19:54.11:0,54,544	0/0:20,0:19:45.10:0,45,459	0/0:21,0:21:50.47:0,50,497	0/0:23,0:23:69.16:0,69,704	0/0:13,0:13:27.06:0,27,275	0/0:24,0:24:60.12:0,60,605	0/0:16,0:16:42.09:0,42,427	0/0:17,0:17:51.10:0,51,513	0/0:24,0:24:63.14:0,63,643	0/0:14,0:14:36.08:0,36,367	0/0:24,0:23:60.05:0,60,598	0/0:26,0:26:72.16:0,72,734	0/0:18,0:17:36.07:0,36,367	0/0:19,0:18:45.10:0,45,458	0/0:23,0:22:51.10:0,51,513	0/0:9,0:9:24.05:0,24,245	0/0:15,0:14:36.08:0,36,367	0/0:15,0:15:42.09:0,42,427	0/0:18,0:17:45.10:0,45,459	0/1:14,12:26:99:381,0,294	0/0:20,0:20:42.09:0,42,428	0/0:16,0:16:42.09:0,42,426
chr10	11609411	.	TTGTGTGTG	T	4378.23	PASS	AB=0.760;AC=29;AF=0.558;AN=52;BaseQRankSum=1.056;DP=441;FS=16.176;HRun=0;HaplotypeScore=134.9062;InbreedingCoeff=0.7450;MQ=61.63;MQ0=8;MQRankSum=-7.765;QD=21.15;ReadPosRankSum=-0.999;VQSLOD=3.0728;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:21,6:28:23.82:498,24,0	1/1:4,2:6:3.01:76,3,0	0/0:19,0:14:3.01:0,3,71	./.	1/1:8,8:15:15.05:376,15,0	0/1:13,1:19:99:113,0,122	0/0:14,0:22:14.12:0,14,295	0/0:19,0:16:16.61:0,17,559	1/1:7,1:10:9.03:188,9,0	1/1:5,5:11:18.06:409,18,0	1/1:8,2:10:6.02:132,6,0	0/0:10,0:19:26.23:0,26,678	0/0:6,0:18:23.21:0,23,649	0/0:9,0:14:30.03:0,30,556	1/1:3,11:13:24.08:588,24,0	1/1:7,8:16:27.09:663,27,0	1/1:10,5:14:9.03:202,9,0	1/1:6,1:8:9.03:169,9,0	0/0:11,0:11:10.28:0,10,264	0/0:9,0:11:3.01:0,3,104	0/0:37,0:38:45.12:0,45,1436	0/0:5,0:8:15.05:0,15,289	1/1:6,5:12:8.81:123,9,0	./.	0/0:10,0:16:17.55:0,18,550	1/1:18,4:23:15.05:329,15,0	1/1:7,6:14:17.85:435,18,0	1/1:2,1:3:3.01:76,3,0
chr10	11609469	.	CT	C	456.08	PASS	AB=0.810;AC=21;AF=0.375;AN=56;BaseQRankSum=1.784;DP=408;FS=3.446;HRun=15;HaplotypeScore=79.3226;InbreedingCoeff=0.3187;MQ=57.04;MQ0=6;MQRankSum=-0.073;QD=2.07;ReadPosRankSum=2.869;VQSLOD=-0.5074;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,2:36:6.84:0,7,194	0/0:3,0:3:3:0,3,26	0/0:15,0:12:18.63:0,19,123	0/0:9,0:2:0:0,0,0	0/0:16,0:19:16.95:0,17,99	0/1:4,2:6:3.58:34,0,4	1/1:10,11:24:0.96:106,1,0	0/1:13,9:22:5.92:95,0,6	0/0:12,0:12:14.45:0,14,136	0/1:8,1:9:1.35:1,0,100	0/1:8,1:9:7.30:7,0,61	1/1:7,0:23:22.31:65,22,0	1/1:7,1:13:11.89:52,12,0	1/1:5,1:16:15.59:45,16,0	0/1:19,2:21:8.63:9,0,154	0/0:13,0:15:19.98:0,20,189	0/0:14,2:14:6.46:0,6,139	0/0:8,0:9:12.31:0,12,92	0/1:8,5:17:0.27:93,0,0	1/1:3,1:4:1.99:6,2,0	0/1:9,5:14:6.59:82,0,7	1/1:5,0:9:4.01:12,4,0	0/0:4,0:6:11.68:0,12,80	0/1:10,2:10:1.30:1,0,102	0/0:13,0:11:24.19:0,24,194	0/0:23,1:23:19.73:0,20,290	0/1:16,1:19:8.01:8,0,187	0/0:7,0:7:12:0,12,105
chr10	11609731	.	T	TTCC	4806.20	PASS	AC=46;AF=0.885;AN=52;BaseQRankSum=-6.040;DP=336;FS=8.765;HRun=0;HaplotypeScore=66.7801;InbreedingCoeff=0.8853;MQ=83.38;MQ0=0;MQRankSum=-3.783;QD=18.63;ReadPosRankSum=-0.526;VQSLOD=3.5913;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:11:24.02:203,24,0	1/1:2,0:2:5.99:50,6,0	0/0:27,0:22:49.25:0,49,391	0/0:25,0:17:23.63:0,24,193	1/1:11,1:12:18.02:221,18,0	1/1:9,0:9:17.96:218,18,0	1/1:14,0:14:26.99:343,27,0	1/1:18,0:18:39.44:368,39,0	1/1:13,0:13:9.11:63,9,0	1/1:13,0:13:35.82:280,36,0	./.	1/1:6,0:6:14.93:187,15,0	1/1:8,0:8:14.71:94,15,0	1/1:8,0:8:14.80:107,15,0	1/1:6,2:7:20.98:274,21,0	1/1:10,2:12:17.48:223,17,0	1/1:14,1:15:16.92:175,17,0	1/1:11,1:12:23.14:250,23,0	1/1:9,0:9:23.86:246,24,0	1/1:15,1:16:23.87:261,24,0	1/1:12,0:12:24:240,24,0	1/1:4,0:4:8.87:57,9,0	1/1:17,1:18:26.21:230,26,0	1/1:8,2:10:17.97:235,18,0	0/0:12,0:12:24.29:0,24,187	1/1:4,11:15:32.91:311,33,0	1/1:12,1:12:17.45:171,17,0	./.
chr10	11609732	.	T	TCCT	4823.05	PASS	AC=46;AF=0.885;AN=52;BaseQRankSum=-6.010;DP=350;FS=10.292;HRun=0;HaplotypeScore=78.5230;InbreedingCoeff=0.8853;MQ=82.90;MQ0=0;MQRankSum=-3.771;QD=17.67;ReadPosRankSum=-0.824;VQSLOD=3.0911;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:10,0:11:24.02:203,24,0	1/1:2,0:2:5.99:50,6,0	0/0:25,0:23:49.24:0,49,391	0/0:25,0:17:23.63:0,24,193	1/1:10,1:12:18.02:221,18,0	1/1:11,0:11:17.96:218,18,0	1/1:16,0:16:26.60:342,27,0	1/1:18,0:18:39.44:368,39,0	1/1:11,0:13:9.11:63,9,0	1/1:13,0:13:35.82:280,36,0	./.	1/1:8,0:8:14.93:187,15,0	1/1:9,0:9:14.71:94,15,0	1/1:9,0:9:14.80:107,15,0	1/1:6,0:7:20.98:274,21,0	1/1:10,0:12:17.48:223,17,0	1/1:7,0:15:16.92:175,17,0	1/1:7,0:12:23.14:250,23,0	1/1:10,0:10:26.78:263,27,0	1/1:1,1:16:23.87:261,24,0	1/1:15,0:15:23.93:240,24,0	1/1:5,0:5:8.80:57,9,0	1/1:11,4:18:26.21:230,26,0	1/1:7,0:11:17.97:235,18,0	0/0:10,0:12:24.29:0,24,187	1/1:14,0:15:32.91:311,33,0	1/1:9,0:13:17.45:171,17,0	./.
chr10	11609733	.	C	CCT	4611.84	PASS	AB=1.000;AC=47;AF=0.870;AN=54;BaseQRankSum=-6.200;DP=347;FS=0.735;HRun=0;HaplotypeScore=74.8434;InbreedingCoeff=0.7221;MQ=82.80;MQ0=0;MQRankSum=-4.005;QD=16.35;ReadPosRankSum=0.881;VQSLOD=4.5296;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,0:12:26.80:240,27,0	1/1:2,0:2:5.99:50,6,0	0/0:28,0:23:56.39:0,56,457	0/0:25,0:16:23.92:0,24,180	1/1:9,3:12:18:211,18,0	0/1:10,0:10:2.82:154,0,3	1/1:16,0:16:22.63:294,23,0	1/1:17,0:17:38.66:345,39,0	1/1:5,7:12:7.37:126,7,0	1/1:2,11:13:35.83:303,36,0	1/1:13,0:12:4.26:51,4,0	1/1:9,0:9:14.93:157,15,0	1/1:8,0:8:14.71:94,15,0	1/1:8,0:8:14.77:107,15,0	1/1:7,1:7:20.94:199,21,0	1/1:6,6:12:17.70:161,18,0	1/1:15,1:16:17.01:190,17,0	1/1:11,1:12:23.86:217,24,0	1/1:9,0:9:26.78:242,27,0	1/1:15,0:15:23.86:227,24,0	1/1:15,0:15:4.84:218,5,0	1/1:5,0:5:8.87:57,9,0	1/1:17,1:18:26.66:229,27,0	1/1:10,1:11:18:215,18,0	0/0:12,0:12:23.66:0,24,183	1/1:15,0:15:31.66:332,32,0	1/1:11,3:13:17.87:194,18,0	./.
chr10	11609734	.	C	CT	3070.51	PASS	AB=0.961;AC=44;AF=0.815;AN=54;BaseQRankSum=-5.989;DP=339;FS=4.599;HRun=0;HaplotypeScore=66.0701;InbreedingCoeff=0.4489;MQ=83.38;MQ0=0;MQRankSum=-1.859;QD=11.21;ReadPosRankSum=2.069;VQSLOD=3.7388;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,0:12:15.45:151,15,0	1/1:2,0:2:5.99:50,6,0	0/0:28,0:23:53.65:0,54,378	0/0:25,0:16:21.48:0,21,161	1/1:11,0:11:17.31:140,17,0	0/1:10,0:10:2.04:125,0,2	1/1:16,0:16:22.51:216,23,0	1/1:16,0:16:28.08:302,28,0	0/1:11,0:11:9.51:26,0,10	1/1:11,0:11:14.75:214,15,0	1/1:14,0:13:5.92:44,6,0	1/1:9,0:10:14.87:114,15,0	1/1:8,0:8:14.71:94,15,0	1/1:9,0:9:4.10:82,4,0	1/1:8,0:7:16.59:112,17,0	1/1:11,1:12:10.73:91,11,0	0/1:13,3:16:4.15:68,0,4	1/1:12,0:12:1.68:111,2,0	1/1:1,8:9:22.35:177,22,0	1/1:15,0:15:23.43:158,23,0	0/1:15,0:15:12.72:210,0,13	1/1:5,0:5:8.57:56,9,0	1/1:14,3:17:24.71:207,25,0	1/1:10,0:10:17.73:126,18,0	0/0:12,0:12:20.07:0,20,170	1/1:11,1:12:28.46:269,28,0	1/1:12,1:12:14.26:83,14,0	./.
chr10	11611511	.	CT	C	2814.94	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=9.944;DP=594;FS=0.000;HRun=11;HaplotypeScore=60.5773;InbreedingCoeff=0.9567;MQ=71.32;MQ0=1;MQRankSum=-1.361;QD=14.74;ReadPosRankSum=1.112;VQSLOD=4.0312;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:47:99:0,120,1207	0/0:3,0:3:6.02:0,6,64	0/0:22,0:16:23.65:0,24,208	0/0:16,1:12:12.43:0,12,129	0/0:28,3:31:50.37:0,50,718	1/1:2,17:19:47.94:394,48,0	1/1:5,10:15:23:216,23,0	1/1:11,12:24:23.83:190,24,0	0/0:13,1:14:5.38:0,5,239	0/0:29,0:31:59.96:0,60,608	0/0:25,0:25:52.30:0,52,525	1/1:2,17:20:43.94:345,44,0	1/1:1,10:11:20.97:172,21,0	1/1:4,14:20:34.03:258,34,0	0/0:17,0:17:33.08:0,33,345	0/0:20,0:20:48.09:0,48,495	0/0:38,2:39:61.94:0,62,1045	0/0:27,1:27:31.55:0,32,557	1/1:5,13:18:35.86:289,36,0	1/1:5,23:28:68.90:566,69,0	1/1:3,17:20:41.87:345,42,0	1/1:4,10:16:34.03:258,34,0	0/0:24,0:24:32.71:0,33,534	0/0:15,0:15:42.09:0,42,440	0/0:22,1:23:35.49:0,35,575	0/0:19,0:18:36.07:0,36,371	0/0:21,0:21:48.11:0,48,504	0/0:4,0:4:12.03:0,12,128
chr10	11616244	.	CGTGT	C	1183.77	PASS	AB=1.000;AC=31;AF=0.705;AN=44;BaseQRankSum=-2.361;DP=447;FS=11.080;HRun=0;HaplotypeScore=102.3677;InbreedingCoeff=0.5153;MQ=57.26;MQ0=18;MQRankSum=-0.076;QD=4.30;ReadPosRankSum=3.219;VQSLOD=1.1499;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:21,8:27:3.01:46,3,0	1/1:4,0:6:5.58:31,6,0	./.	./.	1/1:18,0:20:3.01:34,3,0	1/1:13,0:18:9.01:84,9,0	1/1:10,0:14:3:28,3,0	0/0:20,0:19:3.01:0,3,47	1/1:9,1:10:9.02:107,9,0	1/1:14,2:15:5.81:59,6,0	1/1:14,2:17:6.01:74,6,0	0/0:13,0:13:6.46:0,6,49	0/0:9,0:9:9.02:0,9,98	0/0:12,0:12:5.81:0,6,60	1/1:12,3:14:7.26:79,7,0	1/1:9,4:13:12.04:186,12,0	1/1:24,1:31:8.47:102,8,0	1/1:15,7:20:12.04:186,12,0	0/0:18,0:17:14.77:0,15,144	0/0:9,0:8:5.98:0,6,51	./.	0/1:13,0:13:27.73:28,0,74	1/1:10,1:12:7.51:65,8,0	1/1:14,1:15:6.02:76,6,0	./.	1/1:14,5:17:12.02:147,12,0	./.	./.
chr10	11616276	.	T	TGC	302.91	PASS	AB=0.897;AC=6;AF=0.111;AN=54;BaseQRankSum=3.756;DP=448;FS=2.192;HRun=0;HaplotypeScore=114.2370;InbreedingCoeff=0.2458;MQ=46.53;MQ0=29;MQRankSum=-3.443;QD=4.73;ReadPosRankSum=1.519;VQSLOD=2.9491;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:29:23.95:0,24,194	0/0:11,0:11:20.28:0,20,167	./.	0/0:17,0:5:2.61:0,3,23	0/0:16,0:16:17.95:0,18,148	0/0:15,0:15:26.84:0,27,205	0/0:20,0:19:23.54:0,24,189	0/1:16,0:13:39.24:39,0,142	0/0:14,0:13:20.88:0,21,168	0/0:14,0:12:32.86:0,33,278	0/0:17,0:17:38.90:0,39,313	0/1:13,0:13:9.33:9,0,60	0/0:8,0:7:11.38:0,11,69	0/0:14,0:12:9.01:0,9,100	0/0:15,0:13:23.94:0,24,193	0/0:14,0:13:20.89:0,21,157	0/0:26,0:25:41.66:0,42,305	0/0:27,0:23:53.68:0,54,401	0/1:6,7:13:18.71:265,0,19	1/1:0,7:6:6.02:99,6,0	0/1:14,1:11:0:0,0,0	0/0:15,0:14:11.55:0,12,95	0/0:12,0:12:12:0,12,108	0/0:18,0:18:23.71:0,24,196	0/0:27,0:27:23.65:0,24,177	0/0:25,0:23:53.94:0,54,394	0/0:12,0:11:19.85:0,20,134	0/0:3,0:1:2.98:0,3,22
chr10	11616290	.	T	TGCGCGCGC	1369.36	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=-0.978;DP=428;FS=4.494;HRun=0;HaplotypeScore=161.0844;InbreedingCoeff=-0.0219;MQ=54.14;MQ0=21;MQRankSum=3.102;QD=4.45;ReadPosRankSum=0.044;VQSLOD=2.5858;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:28:1.31:99,0,1	0/1:12,0:12:17.83:18,0,65	0/0:11,0:2:1.55:0,2,4	0/0:19,0:9:9.50:0,9,155	1/1:10,0:10:0.87:6,1,0	0/0:11,0:11:27.09:0,27,574	0/0:22,0:21:38.90:0,39,786	0/1:17,0:14:38.64:98,0,39	0/1:13,0:12:28.45:28,0,91	0/1:12,0:10:30.90:68,0,31	0/1:12,0:12:26.60:27,0,68	1/1:7,4:13:3.48:52,3,0	1/1:11,1:11:15.02:354,15,0	1/1:14,5:17:6.02:240,6,0	0/1:15,0:14:44.50:53,0,44	0/1:12,0:11:2.61:3,0,85	0/1:22,0:21:54.92:55,0,140	0/1:23,0:20:11.39:11,0,156	0/1:16,0:16:65.52:66,0,181	0/0:12,0:11:5.95:0,6,46	0/0:20,0:17:4.99:0,5,31	1/1:15,1:15:5.72:171,6,0	0/1:10,0:10:0.23:23,0,0	1/1:18,0:18:8.68:75,9,0	0/0:25,0:25:33.10:0,33,792	0/1:17,0:16:46.10:46,0,104	1/1:8,0:7:6.53:33,7,0	1/1:2,0:1:1.82:5,2,0
chr10	11617088	.	GCTTAATAGC	G	20138.14	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=17.791;DP=597;FS=3.640;HRun=0;HaplotypeScore=186.6480;InbreedingCoeff=0.9907;MQ=78.28;MQ0=0;MQRankSum=-18.177;QD=74.86;ReadPosRankSum=3.481;VQSLOD=5.0686;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,7:8:18.06:542,18,0	1/1:1,7:8:21.07:651,21,0	0/0:20,0:20:57.20:0,57,2465	0/0:18,0:18:54.15:0,54,2187	1/1:2,27:29:57.20:1759,57,0	0/0:33,0:33:99:0,99,4702	0/0:16,0:16:48.16:0,48,2252	0/0:37,0:37:99:0,108,4992	1/1:2,21:23:54.19:1658,54,0	1/1:3,19:23:60.21:1861,60,0	1/1:6,15:21:51.16:1487,51,0	0/0:21,0:21:63.22:0,63,3074	0/0:27,0:27:81.26:0,81,3617	0/0:29,0:29:87.30:0,87,4203	1/1:2,17:19:51.18:1580,51,0	1/1:1,21:22:63.22:1937,63,0	1/1:2,11:13:27.09:820,27,0	1/1:1,4:5:12.04:372,12,0	0/0:14,0:14:42.14:0,42,1881	0/0:36,0:36:99:0,99,4704	0/0:30,0:30:90.31:0,90,4160	0/0:28,0:28:81.28:0,81,3932	1/1:3,17:20:39.13:1209,39,0	1/1:2,8:10:17.99:549,18,0	0/0:19,0:19:57.20:0,57,2796	1/1:2,38:40:99:3389,114,0	1/1:4,19:23:63.22:1860,63,0	1/1:0,5:5:15.05:465,15,0
chr10	11617096	.	GC	G	2841.73	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=20.066;DP=600;FS=6.380;HRun=2;HaplotypeScore=153.3382;InbreedingCoeff=0.9937;MQ=77.15;MQ0=0;MQRankSum=-18.780;QD=10.85;ReadPosRankSum=3.615;VQSLOD=2.0525;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,3:11:19.40:117,19,0	1/1:7,1:8:21.76:110,22,0	0/0:19,0:19:57.19:0,57,837	0/0:17,0:17:51.15:0,51,734	1/1:27,2:29:49.68:196,50,0	0/0:34,0:34:99:0,99,1483	0/0:15,0:15:45.15:0,45,675	0/0:35,0:35:99:0,102,1529	1/1:21,1:22:51.55:258,52,0	1/1:21,2:23:62.47:309,62,0	1/1:15,1:16:38.30:173,38,0	0/0:24,0:24:72.24:0,72,1069	0/0:25,0:25:75.24:0,75,1092	0/0:30,0:30:90.25:0,90,1300	1/1:19,0:19:51.87:269,52,0	1/1:21,2:23:60.39:315,60,0	1/1:11,0:11:24.44:125,24,0	1/1:5,1:6:16.73:118,17,0	0/0:17,0:17:51.17:0,51,762	0/0:38,0:38:99:0,108,1613	0/0:31,0:31:90.26:0,90,1287	0/0:30,0:30:84.23:0,84,1259	1/1:17,0:17:34.82:138,35,0	1/1:9,0:9:14.64:57,15,0	0/0:23,0:23:69.23:0,69,1034	1/1:38,0:38:99:491,100,0	1/1:20,2:22:56.96:267,57,0	1/1:5,3:8:19.41:131,19,0
chr10	11617186	.	GA	G	11933.41	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=17.288;DP=668;FS=3.257;HRun=3;HaplotypeScore=68.5755;InbreedingCoeff=0.9997;MQ=82.01;MQ0=0;MQRankSum=-3.448;QD=34.69;ReadPosRankSum=4.556;VQSLOD=5.4606;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,22:23:60.19:744,60,0	1/1:1,11:12:33.10:409,33,0	0/0:23,0:23:63.19:0,63,866	0/0:14,0:14:24.34:0,24,344	1/1:1,26:27:72.23:892,72,0	0/0:23,0:23:69.22:0,69,978	0/0:20,0:20:57.18:0,57,803	0/0:36,0:36:99:0,99,1391	1/1:2,21:23:63.20:781,63,0	1/1:1,27:28:84.21:992,84,0	1/1:1,16:17:48.15:595,48,0	0/0:24,0:24:72.24:0,72,1037	0/0:31,0:31:90.30:0,90,1294	0/0:26,0:26:78.25:0,78,1091	1/1:1,21:22:66.21:818,66,0	1/1:0,17:17:51.16:632,51,0	1/1:0,21:21:54.17:669,54,0	1/1:0,16:16:48.15:595,48,0	0/0:19,0:19:57.19:0,57,814	0/0:36,0:36:99:0,99,1391	0/0:29,0:29:87.28:0,87,1235	0/0:20,0:20:51.17:0,51,735	1/1:0,28:28:81.25:1003,81,0	1/1:0,25:25:72.23:892,72,0	0/0:23,0:23:66.19:0,66,914	1/1:4,34:38:99:1328,108,0	1/1:2,27:29:81.25:1003,81,0	1/1:1,17:18:48.12:580,48,0
chr10	11617993	.	G	GGAAA	1674.30	PASS	AB=0.587;AC=21;AF=0.375;AN=56;BaseQRankSum=4.666;DP=407;FS=13.734;HRun=0;HaplotypeScore=96.1648;InbreedingCoeff=-0.2734;MQ=74.87;MQ0=1;MQRankSum=-3.669;QD=7.06;ReadPosRankSum=1.513;VQSLOD=1.4643;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:4,0:16:37.28:128,0,37	0/1:1,0:3:13.88:24,0,14	0/0:17,0:14:22.72:0,23,212	0/0:19,0:14:21.07:0,21,124	0/1:4,0:18:24.01:206,0,24	0/0:5,0:22:53.89:0,54,506	0/0:1,0:12:24.80:0,25,219	0/0:6,0:29:5.40:0,5,503	0/1:4,0:9:36.96:37,0,51	0/1:6,1:19:71.67:204,0,72	0/1:2,0:10:37.84:38,0,40	0/1:4,0:14:41.09:41,0,57	0/1:1,0:9:9.03:70,0,9	0/1:7,0:11:28.06:96,0,28	0/1:4,0:18:37.88:73,0,38	0/1:3,0:13:48.23:48,0,61	0/1:2,0:16:1.07:184,0,1	1/1:5,0:13:13.76:214,14,0	0/0:10,0:15:0.54:0,1,323	0/0:5,0:24:46.05:0,46,489	0/0:5,0:16:43.48:0,43,358	1/1:1,1:6:14.84:117,15,0	0/1:1,0:10:10.58:64,0,11	0/1:3,0:7:30.78:39,0,31	0/0:15,0:15:44.62:0,45,780	0/1:11,0:17:58.44:167,0,58	0/1:3,0:17:52.73:53,0,60	0/1:1,0:9:21.01:36,0,21
chr10	11618101	.	CTTT	C	4010.94	PASS	AB=0.658;AC=41;AF=0.732;AN=56;BaseQRankSum=-3.681;DP=355;FS=11.567;HRun=16;HaplotypeScore=57.6464;InbreedingCoeff=0.6514;MQ=72.57;MQ0=9;MQRankSum=0.221;QD=14.64;ReadPosRankSum=4.838;VQSLOD=0.7795;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,12:15:23.64:258,24,0	1/1:4,4:8:7.08:57,7,0	0/0:19,0:13:20.72:0,21,263	0/0:14,0:9:9.03:0,9,118	1/1:4,18:22:44.92:480,45,0	1/1:3,14:17:27.01:291,27,0	0/1:2,6:8:2.73:171,0,3	0/0:10,0:19:15.79:0,16,83	1/1:6,9:15:23.94:258,24,0	1/1:2,9:11:26.95:290,27,0	1/1:7,7:14:20.87:224,21,0	1/1:2,6:7:15:160,15,0	1/1:2,2:4:6:65,6,0	1/1:2,2:4:8.97:83,9,0	1/1:1,8:9:9.01:97,9,0	1/1:4,10:14:16.50:191,16,0	1/1:3,7:9:15.04:162,15,0	1/1:7,14:20:10.01:271,10,0	0/1:10,0:11:1.29:1,0,45	0/1:8,1:18:11.64:12,0,65	0/0:3,0:8:6.23:0,6,14	0/0:2,0:2:0:0,0,0	1/1:5,8:13:17.92:181,18,0	1/1:1,3:4:9:97,9,0	0/0:17,0:17:29.82:0,30,398	1/1:7,9:16:23.79:244,24,0	1/1:4,7:11:14.81:161,15,0	1/1:2,8:10:24.06:258,24,0
chr10	11620092	.	C	CAAAA	6747.85	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-10.635;DP=652;FS=0.862;HRun=2;HaplotypeScore=98.7426;InbreedingCoeff=0.9997;MQ=74.60;MQ0=0;MQRankSum=-6.484;QD=69.57;ReadPosRankSum=-3.531;VQSLOD=3.9028;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:58:99:0,169,3031	0/0:11,0:11:33.11:0,33,617	0/0:21,0:21:48.14:0,48,833	0/0:16,0:16:42.14:0,42,786	0/0:34,0:34:93.30:0,93,1709	0/0:30,0:30:87.28:0,87,1582	0/0:20,0:20:54.17:0,54,980	1/1:5,15:24:66.15:1565,66,0	0/0:12,0:12:36.11:0,36,643	0/0:38,0:38:99:0,108,2019	0/0:15,0:15:45.15:0,45,831	0/0:23,0:23:69.20:0,69,1198	0/0:21,0:21:63.22:0,63,1165	0/0:25,0:25:72.23:0,72,1316	0/0:28,0:28:81.28:0,81,1516	0/0:18,0:18:51.17:0,51,946	0/0:26,0:26:78.25:0,78,1414	0/0:10,0:10:30.10:0,30,562	1/1:2,18:21:60.16:1560,60,0	1/1:1,29:32:96.24:2353,96,0	1/1:1,17:20:51.17:1270,51,0	0/0:23,0:23:69.23:0,69,1260	0/0:18,0:18:51.17:0,51,947	0/0:14,0:14:42.12:0,42,752	0/0:20,0:20:60.19:0,60,1092	0/0:32,0:32:87.30:0,87,1625	0/0:26,0:26:75.24:0,75,1365	0/0:16,0:16:48.16:0,48,899
chr10	11621452	.	A	AGTGTGTGTGT	15099.49	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-0.508;DP=638;FS=0.784;HRun=0;HaplotypeScore=206.6995;InbreedingCoeff=0.6050;MQ=50.24;MQ0=8;MQRankSum=-5.418;QD=26.68;ReadPosRankSum=-3.399;VQSLOD=3.7638;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,5:29:9.03:331,9,0	1/1:6,1:9:3.01:150,3,0	0/0:25,0:12:6.01:0,6,117	0/0:19,0:11:6.02:0,6,120	1/1:26,4:33:5.91:299,6,0	1/1:22,0:22:9.02:268,9,0	1/1:21,0:22:21.54:740,22,0	1/1:36,0:32:18:249,18,0	1/1:16,6:26:21.07:1041,21,0	1/1:20,4:28:48.12:1492,48,0	1/1:14,5:23:15.05:628,15,0	1/1:21,1:24:15.04:566,15,0	1/1:17,1:22:12.04:560,12,0	1/1:20,1:22:6.02:280,6,0	1/1:17,7:25:21.07:1036,21,0	1/1:11,6:21:23.73:899,24,0	1/1:15,2:20:21.07:924,21,0	1/1:6,2:10:14.08:402,14,0	1/1:13,0:13:15.03:367,15,0	1/1:18,0:17:0.11:0,0,0	1/1:11,0:9:6.02:98,6,0	1/1:13,2:16:6.02:280,6,0	1/1:15,1:19:6.02:240,6,0	1/1:16,3:19:6.02:299,6,0	0/0:26,0:28:72.24:0,72,2064	1/1:29,11:44:66.17:2215,66,0	1/1:28,8:40:29.70:1496,30,0	1/1:6,2:9:6.02:240,6,0
chr10	11624456	.	G	GA	3080.09	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-10.882;DP=816;FS=3.041;HRun=6;HaplotypeScore=74.5914;InbreedingCoeff=0.9916;MQ=75.73;MQ0=0;MQRankSum=-0.787;QD=28.79;ReadPosRankSum=-3.134;VQSLOD=3.0568;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,132,1339	0/0:8,0:8:18.04:0,18,183	0/0:17,0:17:30.05:0,30,353	0/0:16,0:16:13.68:0,14,311	0/0:32,0:32:93.16:0,93,926	0/0:25,0:25:72.16:0,72,735	0/0:24,0:24:66.15:0,66,673	1/1:7,21:28:63.13:757,63,0	0/0:31,0:31:90.19:0,90,911	0/0:36,0:36:99:0,105,1067	0/0:21,0:21:57.13:0,57,581	0/0:27,0:27:72.15:0,72,727	0/0:33,0:33:80.96:0,81,825	0/0:28,0:28:78.16:0,78,789	0/0:38,0:38:99:0,108,1094	0/0:38,0:38:99:0,99,986	0/0:37,0:37:99:0,99,1009	0/0:23,0:23:63.11:0,63,632	1/1:3,11:14:33.11:415,33,0	1/1:1,33:34:87.28:1087,87,0	1/1:3,28:31:78.25:981,78,0	0/0:39,0:39:99:0,111,1120	0/0:33,0:33:90.20:0,90,918	0/0:27,0:27:72.16:0,72,735	0/0:19,0:19:54.10:0,54,543	0/0:40,0:40:99:0,105,1066	0/0:44,0:44:99:0,120,1224	0/0:26,0:26:66.15:0,66,673
chr10	11624725	.	GTTTTGTTT	G	2640.05	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-1.823;DP=645;FS=6.702;HRun=0;HaplotypeScore=167.3738;InbreedingCoeff=0.9858;MQ=63.14;MQ0=9;MQRankSum=-6.927;QD=31.06;ReadPosRankSum=-1.031;VQSLOD=2.9010;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:27:69.13:0,69,1763	0/0:4,0:6:13.26:0,13,262	0/0:33,0:17:43.76:0,44,917	0/0:29,0:14:20.73:0,21,485	0/0:27,0:27:46.08:0,46,1391	0/0:27,0:27:75.12:0,75,1579	0/0:19,0:19:54.14:0,54,1119	1/1:28,9:38:92.30:1228,92,0	0/0:24,0:24:33.02:0,33,891	0/0:20,0:20:51.13:0,51,1495	0/0:19,0:19:51.09:0,51,1316	0/0:25,0:24:69.11:0,69,1395	0/0:22,0:22:54.14:0,54,1220	0/0:19,0:19:36.06:0,36,728	0/0:28,0:28:75.15:0,75,2040	0/0:23,0:23:45.11:0,45,1274	0/0:40,0:40:73:0,73,2122	0/0:16,0:17:32.89:0,33,594	1/1:10,4:14:21.48:400,21,0	1/1:9,6:16:42.07:827,42,0	1/1:4,13:16:14.95:343,15,0	0/0:17,0:17:48.13:0,48,1132	0/0:18,0:19:36.94:0,37,999	0/0:19,0:19:34.47:0,34,1132	0/0:23,0:23:54.59:0,55,1618	0/0:27,0:28:75.20:0,75,2016	0/0:32,0:32:89.84:0,90,2172	0/0:16,0:17:23.93:0,24,790
chr10	11624728	.	TTG	T	1728.81	PASS	AB=0.959;AC=15;AF=0.268;AN=56;BaseQRankSum=3.473;DP=637;FS=46.867;HRun=0;HaplotypeScore=101.4776;InbreedingCoeff=0.2994;MQ=60.74;MQ0=10;MQRankSum=-3.206;QD=6.70;ReadPosRankSum=-3.434;VQSLOD=0.7949;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:29:50.82:51,0,269	0/0:6,0:6:9.32:0,9,69	0/0:35,0:16:11.78:0,12,321	0/0:26,1:12:20.67:0,21,250	0/0:28,1:29:0.03:0,0,405	0/1:27,0:27:31.22:31,0,127	0/0:18,0:18:0.30:0,0,99	1/1:36,0:36:88.76:809,89,0	0/0:23,0:23:9.79:0,10,255	0/0:19,0:19:19.69:0,20,374	0/1:21,0:21:2.35:2,0,363	0/1:25,2:26:99:147,0,198	0/0:21,0:21:6.82:0,7,163	0/1:13,5:18:48.04:48,0,115	0/0:25,1:26:5.33:0,5,446	0/0:22,0:22:44.63:0,45,410	0/0:40,0:40:42.97:0,43,559	0/0:15,0:15:16.23:0,16,227	1/1:13,0:13:17.10:186,17,0	1/1:16,0:16:38.95:378,39,0	1/1:16,0:15:15:149,15,0	0/1:21,0:21:93.69:94,0,119	0/0:18,0:18:34.27:0,34,334	0/0:19,0:19:33.89:0,34,360	0/0:21,0:21:50.22:0,50,477	0/0:28,0:28:20.26:0,20,532	0/1:34,0:34:1.50:1,0,497	0/0:12,0:12:23.41:0,23,223
chr10	11624730	.	G	GT	1607.64	PASS	AB=0.803;AC=23;AF=0.411;AN=56;BaseQRankSum=-6.619;DP=648;FS=6.334;HRun=17;HaplotypeScore=106.8715;InbreedingCoeff=-0.1088;MQ=61.54;MQ0=11;MQRankSum=2.188;QD=3.60;ReadPosRankSum=-4.027;VQSLOD=-0.5834;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:24,5:29:34.35:302,34,0	1/1:8,0:8:10.68:72,11,0	0/1:39,0:18:9.31:9,0,47	0/0:26,1:12:4.77:0,5,18	0/1:17,10:29:19.96:67,0,20	0/0:10,0:27:30.78:0,31,86	0/0:5,0:18:26.37:0,26,74	0/0:34,0:35:11.58:0,12,45	0/1:8,12:21:7:49,0,7	1/1:12,9:22:21.29:202,21,0	1/1:7,12:21:20.73:195,21,0	0/0:18,0:24:5.52:0,6,45	0/0:6,0:21:26.72:0,27,82	0/0:12,0:16:11.64:0,12,33	0/1:21,4:28:6.36:173,0,6	0/1:11,11:23:32.52:40,0,33	0/1:18,20:41:33.42:178,0,33	0/1:10,6:16:14.45:14,0,17	0/1:11,0:12:12.21:12,0,17	0/0:15,0:17:0.57:0,1,28	0/0:15,0:14:7.62:0,8,22	0/1:12,0:21:4.37:4,0,33	0/1:10,11:22:25.78:53,0,26	0/1:10,9:19:25.53:71,0,26	0/1:18,0:20:4.63:5,0,75	0/1:25,2:27:33.76:124,0,34	0/1:31,2:36:42.16:169,0,42	0/1:6,7:13:39.05:39,0,40
chr10	11625191	.	A	ATATT	11583.13	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-7.094;DP=324;FS=7.544;HRun=0;HaplotypeScore=38.4519;InbreedingCoeff=0.6730;MQ=66.99;MQ0=0;MQRankSum=-3.512;QD=39.40;ReadPosRankSum=2.802;VQSLOD=3.5616;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,19:20:39.13:967,39,0	1/1:0,4:6:8.99:152,9,0	0/0:11,0:11:30.02:0,30,394	0/0:6,0:5:6.96:0,7,132	1/1:3,9:12:15.01:327,15,0	1/1:4,16:22:33.11:830,33,0	1/1:0,4:4:12.04:295,12,0	1/1:9,23:34:78.18:1541,78,0	1/1:0,2:3:3.01:72,3,0	1/1:3,7:11:18.05:409,18,0	1/1:0,4:4:5.85:89,6,0	1/1:1,6:7:12.04:295,12,0	1/1:1,5:8:3.01:77,3,0	1/1:2,9:11:21.07:529,21,0	1/1:1,7:9:12.04:286,12,0	1/1:1,11:13:18.06:454,18,0	1/1:2,18:23:36.12:912,36,0	1/1:2,9:11:15.05:383,15,0	1/1:3,10:14:33.07:727,33,0	1/1:0,8:8:18.06:454,18,0	1/1:3,3:6:6.02:146,6,0	1/1:0,5:6:8.94:116,9,0	1/1:2,5:7:9.03:207,9,0	1/1:0,4:4:3.01:77,3,0	0/0:13,0:13:39.11:0,39,633	1/1:4,10:14:30.10:716,30,0	1/1:1,12:14:21.07:534,21,0	1/1:5,14:23:39.13:987,39,0
chr10	11626282	.	A	ATT	8475.08	PASS	AB=0.716;AC=41;AF=0.732;AN=56;BaseQRankSum=-0.777;DP=675;FS=13.856;HRun=13;HaplotypeScore=94.9201;InbreedingCoeff=0.6939;MQ=67.83;MQ0=2;MQRankSum=0.308;QD=15.55;ReadPosRankSum=-1.406;VQSLOD=1.9509;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,33:41:53.66:691,54,0	1/1:7,4:13:17.49:187,17,0	0/1:17,0:12:3.06:3,0,71	0/0:17,0:10:5.15:0,5,41	1/1:10,19:31:52.99:591,53,0	1/1:5,0:22:4.20:71,4,0	1/1:7,0:22:5.76:87,6,0	0/0:25,0:27:31.67:0,32,312	1/1:7,17:29:56.14:668,56,0	1/1:12,16:32:34.51:648,35,0	1/1:7,17:27:44.93:502,45,0	1/1:7,0:20:18.35:63,18,0	0/1:7,1:23:16.40:96,0,16	1/1:4,0:26:36.97:128,37,0	1/1:3,18:24:38.10:466,38,0	1/1:7,29:39:54.06:859,54,0	1/1:6,25:34:36.76:763,37,0	1/1:8,14:23:33.09:419,33,0	0/0:18,0:19:35.58:0,36,297	0/0:31,0:33:44.28:0,44,436	0/0:18,0:18:38.89:0,39,343	0/1:4,0:19:24.88:68,0,25	1/1:2,19:23:35.13:442,35,0	1/1:3,14:18:33.11:448,33,0	0/0:13,0:15:17.72:0,18,203	1/1:9,17:26:52.30:599,52,0	1/1:9,17:26:36.10:472,36,0	1/1:0,8:9:15.05:204,15,0
chr10	11627530	.	G	GA	2965.11	PASS	AB=0.787;AC=28;AF=0.500;AN=56;BaseQRankSum=-7.627;DP=553;FS=12.653;HRun=12;HaplotypeScore=75.4792;InbreedingCoeff=0.5555;MQ=60.42;MQ0=11;MQRankSum=-0.227;QD=8.64;ReadPosRankSum=-1.310;VQSLOD=0.9339;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:13,24:36:16.69:481,17,0	1/1:4,6:11:17.82:150,18,0	0/1:12,0:6:0:0,0,0	0/0:22,0:10:5.44:0,5,27	1/1:5,17:22:34.46:314,34,0	0/0:20,0:23:20.92:0,21,269	0/0:16,0:16:32.80:0,33,241	0/0:23,1:24:0.58:0,1,168	0/1:5,12:16:9.95:62,0,10	0/1:19,14:31:20.81:227,0,21	1/1:7,14:21:36.01:339,36,0	0/0:16,0:18:24.60:0,25,150	0/0:22,0:23:28.70:0,29,202	0/0:15,0:16:31.74:0,32,218	1/1:8,10:17:14.98:136,15,0	1/1:6,13:19:12.02:117,12,0	1/1:6,19:24:41.29:390,41,0	1/1:3,12:16:14.18:168,14,0	0/0:20,0:20:23.71:0,24,175	0/1:15,0:14:27.68:28,0,74	0/0:8,0:8:14.91:0,15,109	0/0:15,0:16:25.83:0,26,181	1/1:10,15:25:26.95:252,27,0	0/1:6,7:14:9.15:61,0,9	0/0:22,0:23:11.48:0,11,236	1/1:9,11:20:23.97:207,24,0	1/1:14,14:26:1.94:182,2,0	0/1:6,2:8:4.26:50,0,4
chr10	11628106	.	CT	C	3847.92	PASS	AB=1.000;AC=41;AF=0.759;AN=54;BaseQRankSum=0.706;DP=424;FS=0.705;HRun=12;HaplotypeScore=93.3888;InbreedingCoeff=0.6640;MQ=59.22;MQ0=8;MQRankSum=-3.421;QD=11.88;ReadPosRankSum=1.875;VQSLOD=3.6151;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,15:19:35.46:254,35,0	1/1:2,5:7:7.81:87,8,0	0/0:33,0:9:10.19:0,10,80	0/0:22,0:7:9.23:0,9,53	1/1:6,13:20:38.52:236,39,0	0/0:25,0:25:22.30:0,22,134	0/1:10,0:10:8.57:9,0,38	1/1:17,27:44:80.41:614,80,0	1/1:0,3:4:11:75,11,0	1/1:1,7:9:19.65:118,20,0	1/1:0,9:11:25.40:162,25,0	0/0:7,0:7:3.88:0,4,21	0/1:11,0:10:4.12:4,0,41	0/1:11,0:11:7.88:8,0,8	1/1:4,8:14:32.68:204,33,0	1/1:2,7:9:22.85:155,23,0	1/1:9,10:20:25.66:189,26,0	1/1:3,13:15:29.60:212,30,0	1/1:7,9:15:29.58:213,30,0	1/1:4,10:14:32.56:236,33,0	1/1:7,7:14:17.90:139,18,0	./.	1/1:1,5:7:16.93:116,17,0	1/1:2,7:9:17.48:117,17,0	0/0:12,0:12:6.81:0,7,243	1/1:7,16:25:50.76:307,51,0	1/1:1,12:17:41.82:272,42,0	1/1:2,4:7:19.35:121,19,0
chr10	11628118	.	TA	T	692.71	PASS	AB=1.000;AC=13;AF=0.241;AN=54;BaseQRankSum=0.974;DP=407;FS=6.848;HRun=9;HaplotypeScore=117.4433;InbreedingCoeff=0.6204;MQ=68.95;MQ0=6;MQRankSum=-6.166;QD=8.45;ReadPosRankSum=1.104;VQSLOD=1.8050;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:19.68:0,20,97	0/0:6,0:7:9.70:0,10,62	0/0:35,0:13:11.57:0,12,100	0/0:22,0:5:6.42:0,6,48	0/0:20,0:21:28.03:0,28,132	1/1:5,16:23:36.21:328,36,0	1/1:3,7:11:19.14:191,19,0	0/0:36,0:36:45.80:0,46,241	0/1:5,0:5:2.51:3,0,9	0/0:13,0:12:18.52:0,19,104	0/0:12,0:12:15.22:0,15,85	1/1:3,2:6:10.25:65,10,0	1/1:2,3:7:14.04:112,14,0	1/1:1,6:10:19.65:138,20,0	0/0:14,0:14:3.33:0,3,45	0/0:11,0:11:10.93:0,11,75	0/0:14,0:16:28.61:0,29,147	0/0:17,0:15:20.08:0,20,84	0/1:15,0:15:20.29:20,0,66	0/0:16,1:17:0.04:0,0,134	0/0:10,0:10:10.31:0,10,58	./.	0/0:8,0:8:7.23:0,7,53	0/0:8,0:9:9.31:0,9,38	0/0:12,0:12:31.70:0,32,344	0/0:21,0:24:21.74:0,22,134	0/0:19,0:20:22.46:0,22,119	0/1:5,0:5:1.80:2,0,7
chr10	11628421	.	T	TA	995.36	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-8.024;DP=511;FS=10.947;HRun=9;HaplotypeScore=51.8256;InbreedingCoeff=0.9428;MQ=72.72;MQ0=0;MQRankSum=1.011;QD=22.62;ReadPosRankSum=0.937;VQSLOD=3.8512;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:47.98:0,48,413	0/0:9,0:9:26.99:0,27,234	0/0:14,0:14:16.68:0,17,154	0/0:11,0:11:8.20:0,8,97	0/0:21,0:21:62.99:0,63,547	1/1:4,23:27:63.15:685,63,0	1/1:1,16:17:39.11:431,39,0	0/0:37,0:37:91.77:0,92,782	0/0:10,0:10:23.95:0,24,200	0/0:28,0:28:71.94:0,72,615	0/0:14,0:14:35.98:0,36,312	0/0:16,0:16:35.98:0,36,312	0/0:10,0:10:26.99:0,27,234	0/0:17,0:17:41.95:0,42,357	0/0:24,0:25:62:0,62,524	0/0:20,0:20:32.49:0,32,439	0/0:28,0:28:77.93:0,78,668	0/0:15,0:15:41.99:0,42,365	0/0:17,0:17:41.95:0,42,358	0/0:20,0:20:50.96:0,51,438	0/0:18,0:18:50.92:0,51,429	0/0:14,0:14:38.99:0,39,339	0/0:13,0:14:31.91:0,32,249	0/0:12,0:12:29.97:0,30,255	0/0:20,0:20:53.94:0,54,460	0/0:30,0:31:74.02:0,74,631	0/0:20,0:19:53.96:0,54,461	0/0:9,0:9:11.99:0,12,104
chr10	11629326	.	G	GC	1616.39	PASS	AB=0.923;AC=9;AF=0.161;AN=56;BaseQRankSum=-7.534;DP=550;FS=10.976;HRun=8;HaplotypeScore=65.1805;InbreedingCoeff=0.8503;MQ=70.44;MQ0=0;MQRankSum=-0.691;QD=17.20;ReadPosRankSum=-2.679;VQSLOD=2.0608;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:81.01:0,81,730	0/0:2,0:2:3:0,3,27	0/0:14,0:13:26.86:0,27,239	0/0:20,0:20:12.47:0,12,154	0/0:20,0:20:39:0,39,353	0/0:23,0:23:60.01:0,60,549	0/0:26,0:25:66.03:0,66,604	1/1:13,12:24:30.09:346,30,0	0/0:23,0:23:56.96:0,57,509	0/0:13,0:13:32.98:0,33,295	0/0:10,0:10:24.01:0,24,219	0/0:19,0:19:44.96:0,45,404	0/0:20,0:20:51.01:0,51,467	0/0:19,0:19:44.97:0,45,405	0/0:30,0:31:89.04:0,89,795	0/0:29,0:29:78.02:0,78,709	0/0:20,0:20:54.03:0,54,494	0/0:11,0:11:30.02:0,30,275	1/1:5,10:15:30.09:346,30,0	1/1:1,9:11:24.07:277,24,0	1/1:3,28:31:47.76:803,48,0	0/0:16,0:16:36.01:0,36,329	0/1:11,1:12:4.60:5,0,217	0/0:19,0:19:32.96:0,33,297	0/0:25,0:25:66.02:0,66,604	0/0:17,0:17:42:0,42,379	0/0:28,0:28:72.01:0,72,659	0/0:16,0:16:39.01:0,39,357
chr10	11630615	.	CT	C	8825.07	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=2.583;DP=530;FS=6.715;HRun=11;HaplotypeScore=81.3107;InbreedingCoeff=0.8910;MQ=62.95;MQ0=1;MQRankSum=-0.227;QD=18.20;ReadPosRankSum=2.107;VQSLOD=5.8877;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,19:21:53.93:442,54,0	1/1:1,6:7:14.98:123,15,0	0/0:14,0:8:1.79:0,2,57	0/0:10,1:6:14.74:0,15,104	1/1:4,20:24:59.85:484,60,0	1/1:3,17:20:50.94:419,51,0	1/1:2,11:13:26.96:222,27,0	1/1:9,26:37:75.72:591,76,0	1/1:1,13:14:35.71:283,36,0	1/1:7,25:32:74.40:598,74,0	1/1:3,15:18:39.41:321,39,0	1/1:1,17:18:32.96:271,33,0	1/1:4,11:15:14.97:123,15,0	1/1:2,16:18:41.95:345,42,0	1/1:1,10:11:26.97:221,27,0	1/1:3,15:18:44.94:369,45,0	1/1:4,27:31:80.65:651,81,0	1/1:5,9:14:33.72:243,34,0	1/1:7,19:26:53.82:427,54,0	1/1:2,16:18:46.87:362,47,0	1/1:1,19:22:52.01:406,52,0	1/1:2,6:8:11.98:99,12,0	1/1:3,15:20:44.20:339,44,0	1/1:10,14:24:42.92:375,43,0	0/0:19,0:19:48.12:0,48,506	1/1:6,14:20:51.18:400,51,0	1/1:3,18:21:50.88:418,51,0	1/1:0,15:15:35.96:295,36,0
chr10	11630987	.	A	ATTT	14675.89	PASS	AB=0.516;AC=49;AF=0.875;AN=56;BaseQRankSum=-1.693;DP=544;FS=26.032;HRun=9;HaplotypeScore=81.8602;InbreedingCoeff=0.8163;MQ=77.61;MQ0=2;MQRankSum=-4.172;QD=29.29;ReadPosRankSum=0.699;VQSLOD=1.8319;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,17:24:45.09:792,45,0	1/1:1,4:8:15.01:256,15,0	0/0:11,0:11:18.03:0,18,227	0/0:14,0:13:6.22:0,6,230	1/1:7,14:24:42.14:801,42,0	1/1:1,0:23:55.04:416,55,0	1/1:3,0:15:34.12:255,34,0	1/1:9,0:39:83.71:652,84,0	1/1:1,11:16:39.09:673,39,0	1/1:3,22:30:81.24:1437,81,0	1/1:7,8:15:27.06:474,27,0	1/1:2,0:21:47.82:368,48,0	1/1:4,1:19:38.87:334,39,0	1/1:2,0:23:50.31:373,50,0	1/1:3,19:25:54.14:972,54,0	1/1:5,13:18:42.12:753,42,0	1/1:5,21:26:45.15:888,45,0	1/1:3,16:20:48.14:910,48,0	1/1:4,0:24:59.63:530,60,0	1/1:1,0:18:46.10:363,46,0	1/1:0,0:4:10.21:72,10,0	0/1:1,0:15:3.75:217,0,4	1/1:2,14:19:42.10:724,42,0	1/1:4,4:11:18.02:283,18,0	0/0:18,0:18:51.15:0,51,644	1/1:3,19:25:69.15:1151,69,0	1/1:7,15:27:43.65:723,44,0	1/1:0,5:8:15.03:260,15,0
chr10	11631884	.	GTTGTT	G	15917.94	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=8.170;DP=715;FS=2.179;HRun=0;HaplotypeScore=133.8401;InbreedingCoeff=0.9186;MQ=64.63;MQ0=10;MQRankSum=0.339;QD=26.14;ReadPosRankSum=3.213;VQSLOD=4.3288;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,19:28:42.14:767,42,0	1/1:7,11:18:21.07:383,21,0	0/0:31,0:18:6.49:0,6,127	0/0:42,0:22:23.82:0,24,328	1/1:13,15:28:39.07:662,39,0	1/1:9,17:26:27.09:493,27,0	1/1:10,5:15:6.02:109,6,0	1/1:34,0:34:18.05:264,18,0	1/1:6,12:18:27.02:493,27,0	1/1:10,19:29:57.18:948,57,0	1/1:10,18:28:45.07:758,45,0	1/1:8,17:25:39.13:712,39,0	1/1:7,12:19:33.11:602,33,0	1/1:4,8:12:21.07:383,21,0	1/1:9,16:25:27.09:493,27,0	1/1:12,23:35:66.23:1192,66,0	1/1:7,27:34:57.20:1038,57,0	1/1:9,16:26:36.12:657,36,0	1/1:20,7:25:21.07:371,21,0	1/1:7,20:27:60.14:1020,60,0	1/1:10,13:23:27.09:493,27,0	1/1:10,14:24:39:626,39,0	1/1:11,12:23:30.10:548,30,0	1/1:8,8:16:24.08:438,24,0	0/0:33,0:33:84.29:0,84,2166	1/1:11,17:28:54.18:936,54,0	1/1:5,17:22:45.15:821,45,0	1/1:6,13:19:39.13:712,39,0
chr10	11632939	.	TTTA	T	2851.17	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=7.082;DP=441;FS=6.609;HRun=0;HaplotypeScore=99.5673;InbreedingCoeff=0.7075;MQ=67.44;MQ0=1;MQRankSum=-1.050;QD=7.01;ReadPosRankSum=5.021;VQSLOD=1.6504;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:28:31.39:166,31,0	1/1:10,0:10:22.87:86,23,0	0/0:9,0:7:8.32:0,8,132	0/0:6,0:5:11.98:0,12,165	1/1:20,0:20:44.36:163,44,0	1/1:12,0:12:3.14:61,3,0	1/1:16,0:16:24.31:85,24,0	1/1:26,1:27:42.28:305,42,0	1/1:10,0:10:17.47:61,17,0	1/1:10,0:10:24.68:86,25,0	1/1:17,1:18:46.78:224,47,0	1/1:7,0:7:14.72:52,15,0	1/1:16,0:15:22.81:92,23,0	1/1:10,1:11:18.65:106,19,0	1/1:19,1:20:29.76:147,30,0	1/1:10,0:10:22.33:78,22,0	1/1:24,0:24:47.27:164,47,0	1/1:18,0:18:27.44:96,27,0	1/1:16,0:16:0.59:128,1,0	1/1:23,0:23:2.81:136,3,0	1/1:12,0:12:17.45:61,17,0	1/1:7,0:7:10.34:40,10,0	1/1:12,0:12:3.63:62,4,0	1/1:9,0:9:15.82:58,16,0	0/0:19,0:19:51.01:0,51,1040	1/1:20,0:20:11.94:124,12,0	1/1:28,0:28:34.89:160,35,0	1/1:22,1:23:50.27:250,50,0
chr10	11632940	.	TTA	T	12973.50	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=2.211;DP=422;FS=2.851;HRun=0;HaplotypeScore=55.2840;InbreedingCoeff=0.8867;MQ=69.46;MQ0=1;MQRankSum=-1.819;QD=33.52;ReadPosRankSum=2.095;VQSLOD=6.5258;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,26:26:63.14:854,63,0	1/1:0,9:9:27:352,27,0	0/0:9,0:7:1.18:0,1,90	0/0:7,0:6:11.09:0,11,135	1/1:0,19:19:57.05:746,57,0	1/1:0,11:11:30.10:417,30,0	1/1:1,14:15:30.09:418,30,0	1/1:1,24:25:72.16:885,72,0	1/1:0,10:10:21.07:293,21,0	1/1:0,10:10:30.10:418,30,0	1/1:1,17:18:53.96:663,54,0	1/1:0,7:7:18.06:251,18,0	1/1:0,16:15:26.93:375,27,0	1/1:2,7:9:27:332,27,0	1/1:2,16:18:41.62:539,42,0	1/1:0,10:10:27.09:376,27,0	1/1:0,23:23:57.19:795,57,0	1/1:0,17:17:33.11:460,33,0	1/1:0,15:15:42.05:482,42,0	1/1:0,22:22:53.87:618,54,0	1/1:0,10:11:21.06:293,21,0	1/1:1,6:7:18.05:238,18,0	1/1:0,11:11:30.10:418,30,0	1/1:0,9:9:23.99:310,24,0	0/0:19,0:19:50.92:0,51,830	1/1:1,18:19:50.13:747,50,0	1/1:0,27:27:63.21:874,63,0	1/1:8,15:23:69.09:819,69,0
chr10	11633079	.	TTTTTTTTTTCTTTTTTC	T	397.29	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-0.522;DP=458;FS=4.275;HRun=0;HaplotypeScore=127.9591;InbreedingCoeff=0.6105;MQ=52.05;MQ0=46;MQRankSum=0.462;QD=6.73;ReadPosRankSum=-2.582;VQSLOD=2.0079;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:25:12.02:0,12,607	0/0:6,0:5:3:0,3,220	0/0:16,0:7:2.69:0,3,173	0/0:21,0:9:20.94:0,21,413	0/0:33,0:29:40.37:0,40,1588	0/0:21,0:14:9:0,9,531	0/0:18,0:18:26.40:0,26,1642	1/1:17,0:17:9.40:66,9,0	0/0:3,0:1:3.01:0,3,126	0/0:15,0:13:36.11:0,36,1820	0/0:23,0:22:29.94:0,30,1654	0/0:18,0:14:9.01:0,9,568	0/0:8,0:7:6.02:0,6,287	0/0:13,0:11:14.96:0,15,868	0/0:17,0:14:30.05:0,30,1686	0/0:12,0:10:5.27:0,5,388	0/0:33,0:25:48.07:0,48,2292	0/0:14,0:8:6.01:0,6,387	1/1:8,6:13:17.82:202,18,0	1/1:17,1:15:9.75:256,10,0	1/1:10,0:7:0.47:1,0,0	0/0:4,0:4:8.96:0,9,413	0/0:8,0:7:14.97:0,15,623	0/0:18,0:16:3.01:0,3,109	0/0:19,0:18:36.07:0,36,2105	0/0:17,0:14:28.71:0,29,1510	0/0:19,0:18:38.70:0,39,2180	0/0:16,0:10:14.83:0,15,740
chr10	11633080	.	TTTTTTTTTCTTTTTTC	T	471.81	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-1.614;DP=466;FS=3.522;HRun=0;HaplotypeScore=121.2666;InbreedingCoeff=0.6223;MQ=51.37;MQ0=51;MQRankSum=0.294;QD=8.00;ReadPosRankSum=-3.283;VQSLOD=1.3138;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:24:12.02:0,12,551	0/0:6,0:5:2.98:0,3,205	0/0:16,0:7:2.44:0,2,158	0/0:21,0:9:20.92:0,21,348	0/0:33,0:29:39.86:0,40,1398	0/0:21,0:14:8.98:0,9,485	0/0:19,0:18:25.53:0,26,1519	1/1:18,0:18:9.82:68,10,0	0/0:3,0:1:3.01:0,3,111	0/0:15,0:13:36.09:0,36,1671	0/0:23,0:22:29.83:0,30,1497	0/0:19,0:14:8.97:0,9,525	0/0:8,0:7:6.02:0,6,256	0/0:13,0:11:14.15:0,14,824	0/0:17,0:14:29.98:0,30,1549	0/0:12,0:10:5.11:0,5,359	0/0:33,0:25:45.07:0,45,2064	0/0:14,0:7:6.02:0,6,358	1/1:14,0:13:17.82:226,18,0	1/1:7,10:14:17.15:309,17,0	1/1:10,0:7:0.89:2,1,0	0/0:5,0:4:8.91:0,9,370	0/0:8,0:7:14.41:0,14,560	0/0:19,0:16:3.01:0,3,91	0/0:20,0:18:36.04:0,36,1955	0/0:17,0:14:27.53:0,28,1382	0/0:21,0:19:20.13:0,20,2058	0/0:16,0:10:14.70:0,15,672
chr10	11633310	.	AT	A	8244.99	PASS	AB=0.571;AC=49;AF=0.875;AN=56;BaseQRankSum=-0.701;DP=503;FS=5.226;HRun=11;HaplotypeScore=60.4043;InbreedingCoeff=0.7021;MQ=79.60;MQ0=0;MQRankSum=-3.991;QD=18.53;ReadPosRankSum=3.490;VQSLOD=6.0549;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,18:21:53.92:441,54,0	1/1:2,7:9:20.97:172,21,0	0/0:19,0:16:34.48:0,34,291	0/0:18,1:15:0.17:0,0,105	1/1:3,22:25:56.91:468,57,0	1/1:2,24:26:65.92:542,66,0	1/1:2,3:6:14.02:104,14,0	1/1:8,17:25:53.90:441,54,0	1/1:0,11:11:26.97:222,27,0	1/1:1,16:17:47.92:390,48,0	1/1:1,31:32:80.87:665,81,0	1/1:3,10:13:17.96:148,18,0	1/1:2,13:15:26.95:222,27,0	1/1:2,13:15:29.95:246,30,0	1/1:1,16:17:41.95:345,42,0	1/1:3,11:14:32.95:271,33,0	1/1:4,32:36:90.36:739,90,0	1/1:5,18:23:44.92:369,45,0	1/1:5,23:28:39.90:531,40,0	1/1:6,8:15:6.91:177,7,0	1/1:2,2:4:5.97:49,6,0	1/1:1,12:14:34.98:277,35,0	1/1:2,10:12:26.96:222,27,0	1/1:6,10:16:26.95:222,27,0	0/0:20,0:20:45.11:0,45,480	1/1:2,21:24:64.96:523,65,0	1/1:2,13:15:10.31:289,10,0	0/1:3,9:12:5.02:170,0,5
chr10	11634039	.	C	CATACT	46331.80	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-10.207;DP=754;FS=1.998;HRun=0;HaplotypeScore=134.8296;InbreedingCoeff=0.9959;MQ=89.54;MQ0=0;MQRankSum=-11.390;QD=69.99;ReadPosRankSum=6.323;VQSLOD=5.8243;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,27:31:69.24:2136,69,0	1/1:1,9:10:27.09:829,27,0	0/0:26,0:26:66.23:0,66,1376	0/0:41,0:41:99:0,102,1980	1/1:3,25:28:60.21:1857,60,0	1/1:3,19:22:47.90:1487,48,0	1/1:5,14:20:33.11:1019,33,0	1/1:25,19:45:99:3092,117,0	1/1:2,25:28:63.22:1951,63,0	1/1:4,32:40:99:3104,117,0	1/1:4,22:26:60.21:1858,60,0	1/1:2,24:27:69.24:2137,69,0	1/1:2,26:28:69.24:2132,69,0	1/1:3,29:35:69.71:2136,70,0	1/1:3,18:21:45.15:1394,45,0	1/1:3,31:36:99:3050,99,0	1/1:7,18:26:66.16:1878,66,0	1/1:2,6:8:18.06:557,18,0	1/1:4,18:23:66.19:1893,66,0	1/1:3,29:31:78.27:2411,78,0	1/1:5,13:18:24.08:741,24,0	1/1:4,18:23:45.04:1393,45,0	1/1:4,26:31:57.20:1765,57,0	1/1:3,30:33:66.02:2045,66,0	0/0:25,0:25:72.24:0,72,1471	1/1:5,25:30:81.28:2480,81,0	1/1:3,21:25:60.16:1777,60,0	1/1:0,15:15:39.13:1209,39,0
chr10	11634074	.	ATAAG	A	5484.84	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-0.110;DP=672;FS=4.342;HRun=0;HaplotypeScore=222.9593;InbreedingCoeff=0.9988;MQ=92.39;MQ0=0;MQRankSum=-12.686;QD=53.25;ReadPosRankSum=-1.629;VQSLOD=4.8618;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:33:90.31:0,90,2479	0/0:9,0:8:24.08:0,24,671	0/0:34,0:34:67.02:0,67,2539	0/0:35,0:35:99:0,102,2561	0/0:22,0:22:66.23:0,66,1810	0/0:25,0:25:72.23:0,72,1823	0/0:22,0:22:54.19:0,54,1470	1/1:4,42:46:99:2452,123,0	0/0:16,0:16:45.15:0,45,1215	0/0:32,0:32:96.33:0,96,2633	0/0:18,0:18:51.16:0,51,1366	0/0:22,0:22:63.20:0,63,1670	0/0:31,0:31:84.27:0,84,2277	0/0:31,0:31:75.73:0,76,1987	0/0:18,0:18:54.19:0,54,1452	0/0:34,0:33:96.32:0,96,2609	0/0:23,0:22:66.21:0,66,1784	0/0:9,0:9:27.09:0,27,689	1/1:1,19:20:57.20:1138,57,0	1/1:2,23:25:69.24:1356,69,0	1/1:1,11:12:27.09:539,27,0	0/0:16,0:16:48.16:0,48,1304	0/0:15,0:15:45.14:0,45,1190	0/0:33,0:33:81.54:0,82,2206	0/0:28,0:28:84.29:0,84,2329	0/0:21,0:21:54.17:0,54,1452	0/0:24,0:23:69.24:0,69,1924	0/0:17,0:17:48.16:0,48,1304
chr10	11634106	.	C	CGT	4457.13	PASS	AB=0.830;AC=23;AF=0.442;AN=52;BaseQRankSum=-7.722;DP=620;FS=3.796;HRun=0;HaplotypeScore=168.0024;InbreedingCoeff=-0.1023;MQ=62.08;MQ0=11;MQRankSum=2.105;QD=11.73;ReadPosRankSum=-1.468;VQSLOD=4.5676;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:23,7:32:22.69:411,23,0	0/1:10,2:11:21.22:124,0,21	./.	./.	0/1:18,3:21:9.20:258,0,9	0/1:7,0:17:4.58:5,0,9	0/0:18,0:21:8.52:0,9,42	1/1:28,0:28:2.98:21,3,0	1/1:12,0:13:14.98:128,15,0	0/1:24,2:26:92.41:112,0,92	0/1:11,7:18:58:298,0,58	0/0:16,0:24:31.67:0,32,181	0/0:13,0:30:52.72:0,53,252	0/0:16,0:29:34.47:0,34,204	0/1:17,7:23:87.99:382,0,88	0/1:18,5:22:41.58:310,0,42	0/1:12,5:17:53.45:243,0,53	0/1:6,4:10:18.23:166,0,18	1/1:18,0:17:2.04:6,2,0	0/0:14,0:20:2.84:0,3,14	0/0:13,0:15:0:0,0,0	0/0:10,0:13:7.50:0,7,32	1/1:12,7:19:24.08:360,24,0	0/1:17,19:36:33.19:846,0,33	0/0:27,0:30:44.59:0,45,429	0/1:20,1:21:74.54:139,0,75	0/1:25,4:27:37.30:422,0,37	0/1:11,3:14:42.48:225,0,42
chr10	11636540	.	GGTGT	G	4523.80	PASS	AB=0.895;AC=37;AF=0.712;AN=52;BaseQRankSum=4.093;DP=517;FS=0.682;HRun=0;HaplotypeScore=96.2548;InbreedingCoeff=0.7369;MQ=70.53;MQ0=11;MQRankSum=0.909;QD=14.01;ReadPosRankSum=2.499;VQSLOD=4.1108;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:22,10:32:11.98:141,12,0	1/1:1,3:4:9.03:141,9,0	./.	./.	1/1:15,5:20:12.04:188,12,0	0/0:14,0:14:20.76:0,21,269	0/0:17,0:17:18.06:0,18,424	0/0:27,0:22:9.43:0,9,113	1/1:4,8:14:24.07:338,24,0	1/1:14,4:18:15.04:216,15,0	1/1:13,5:18:6.02:94,6,0	1/1:11,9:21:27.08:385,27,0	1/1:12,7:19:17.46:362,17,0	1/1:6,11:19:39.11:554,39,0	1/1:6,12:18:27.09:423,27,0	1/1:10,6:17:18.05:263,18,0	0/1:15,2:17:15.89:108,0,16	1/1:17,4:20:9.03:141,9,0	0/0:19,0:18:15.04:0,15,250	0/0:15,0:15:9.03:0,9,155	0/0:16,0:14:6.01:0,6,134	1/1:2,2:4:3.01:47,3,0	1/1:3,5:9:2.58:176,3,0	1/1:18,11:27:21.07:329,21,0	0/0:17,0:18:35.86:0,36,733	1/1:13,1:16:13.70:167,14,0	1/1:12,2:15:9.02:122,9,0	1/1:3,7:10:21.07:329,21,0
chr10	11637292	.	G	GT	3008.03	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-13.158;DP=701;FS=11.807;HRun=6;HaplotypeScore=88.5720;InbreedingCoeff=0.9984;MQ=77.41;MQ0=0;MQRankSum=-0.597;QD=29.78;ReadPosRankSum=-2.274;VQSLOD=2.3463;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:78.15:0,78,787	0/0:12,0:12:36.07:0,36,361	0/0:13,0:13:26.96:0,27,320	0/0:18,0:18:48.85:0,49,459	0/0:41,0:41:99:0,117,1193	0/0:25,0:25:72.15:0,72,727	0/0:15,0:15:42.09:0,42,428	1/1:3,28:31:84.23:1015,84,0	0/0:46,0:46:99:0,132,1340	0/0:34,0:34:90.16:0,90,900	0/0:15,0:15:42.10:0,42,429	0/0:33,0:33:99:0,99,1003	0/0:22,0:22:60.11:0,60,603	0/0:28,0:28:69.15:0,69,704	0/0:31,0:31:90.18:0,90,909	0/0:24,0:23:69.14:0,69,697	0/0:21,0:21:60.13:0,60,612	0/0:10,0:10:30.07:0,30,306	1/1:4,14:18:48.10:585,48,0	1/1:3,27:30:75.21:927,75,0	1/1:3,19:22:51.16:642,51,0	0/0:30,0:30:84.17:0,84,848	0/0:24,0:24:69.14:0,69,697	0/0:27,0:27:75.17:0,75,765	0/0:29,0:29:78.17:0,78,796	0/0:32,0:32:84.18:0,84,856	0/0:32,0:32:93.21:0,93,949	0/0:11,0:11:21.05:0,21,214
chr10	11638617	.	A	ACG	1657.60	PASS	AB=1.000;AC=28;AF=0.500;AN=56;BaseQRankSum=4.723;DP=455;FS=5.130;HRun=0;HaplotypeScore=132.9514;InbreedingCoeff=0.7519;MQ=62.48;MQ0=4;MQRankSum=-0.284;QD=7.14;ReadPosRankSum=3.745;VQSLOD=3.2705;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:28:21.43:145,21,0	1/1:8,0:8:15.25:105,15,0	0/0:17,0:12:15.76:0,16,261	0/0:23,0:16:7.27:0,7,378	0/0:12,0:12:0.47:0,0,1	0/0:23,0:23:31.88:0,32,444	0/0:22,0:22:50.61:0,51,399	0/0:18,0:18:48.16:0,48,731	0/0:3,0:13:1.28:0,1,8	1/1:14,0:13:29.13:235,29,0	1/1:18,0:18:9.57:128,10,0	0/0:21,0:21:44.87:0,45,410	0/0:17,0:16:38.22:0,38,333	0/1:21,0:21:2.38:2,0,281	1/1:11,0:10:18.70:156,19,0	1/1:7,0:7:12.42:113,12,0	1/1:21,0:21:22.14:181,22,0	1/1:13,0:12:19.13:127,19,0	0/0:14,0:13:39.07:0,39,536	0/0:7,0:7:3.01:0,3,46	0/0:24,0:24:33.09:0,33,478	0/1:16,0:16:24.78:25,0,125	1/1:13,0:13:8.35:60,8,0	1/1:23,0:21:27.17:218,27,0	0/0:11,0:11:30.56:0,31,439	1/1:5,14:19:37.97:239,38,0	1/1:15,0:15:17.61:110,18,0	1/1:5,0:5:5.63:21,6,0
chr10	11638618	.	CAT	C	2997.17	PASS	AB=1.000;AC=33;AF=0.589;AN=56;BaseQRankSum=4.662;DP=450;FS=0.913;HRun=0;HaplotypeScore=125.3716;InbreedingCoeff=0.7330;MQ=62.46;MQ0=4;MQRankSum=-2.750;QD=11.02;ReadPosRankSum=3.122;VQSLOD=3.3667;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:28:32.49:280,32,0	1/1:7,1:8:17.92:159,18,0	0/1:17,0:12:3.79:4,0,260	0/0:21,0:15:20.67:0,21,419	1/1:0,12:12:3.01:32,3,0	0/0:22,0:22:26.04:0,26,332	0/0:22,0:22:42.26:0,42,307	0/0:18,0:18:48.16:0,48,859	1/1:10,3:13:8.01:55,8,0	1/1:13,0:12:34.10:268,34,0	1/1:16,2:18:18.71:165,19,0	0/0:21,0:21:36.45:0,36,232	0/0:17,0:16:23.99:0,24,168	0/1:21,0:21:18.68:19,0,92	1/1:9,2:10:24.02:249,24,0	1/1:7,0:7:17.95:180,18,0	1/1:19,2:21:40.21:279,40,0	1/1:12,1:12:29.30:225,29,0	0/0:14,0:13:39.12:0,39,622	0/0:7,0:7:2.92:0,3,34	0/0:24,0:24:34.04:0,34,509	0/1:16,0:16:27.93:28,0,80	1/1:11,1:12:17.91:157,18,0	1/1:19,4:21:35.44:321,35,0	0/0:11,0:11:30.09:0,30,584	1/1:16,2:18:46.18:352,46,0	1/1:13,2:15:35.87:351,36,0	1/1:4,1:5:11.88:86,12,0
chr10	11638627	.	GCACACA	G	1465.88	PASS	AC=40;AF=0.800;AN=50;BaseQRankSum=5.065;DP=432;FS=0.000;HRun=0;HaplotypeScore=143.6488;InbreedingCoeff=0.3356;MQ=48.36;MQ0=15;MQRankSum=-4.393;QD=4.82;ReadPosRankSum=2.557;VQSLOD=2.0374;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:30:0.47:0,0,1	1/1:7,1:8:3.01:41,3,0	./.	./.	1/1:9,2:12:3.01:46,3,0	1/1:16,3:19:3.01:60,3,0	1/1:19,7:26:15:231,15,0	0/0:10,0:16:3.01:0,3,59	1/1:11,0:11:4.59:58,5,0	0/0:18,0:16:0.47:0,0,1	1/1:19,0:20:0.47:1,0,0	1/1:15,0:21:9.03:126,9,0	1/1:12,0:13:5.07:82,5,0	1/1:10,0:15:15.52:209,16,0	1/1:7,1:8:6.02:104,6,0	0/0:4,0:4:0.47:0,0,1	1/1:20,1:22:5.56:87,6,0	1/1:13,1:13:3.01:46,3,0	1/1:12,0:13:5.99:51,6,0	1/1:3,0:5:4.24:27,4,0	./.	1/1:11,0:15:3.01:42,3,0	1/1:12,0:13:3.01:60,3,0	1/1:21,4:22:6.02:89,6,0	0/0:19,0:18:37.05:0,37,815	1/1:20,2:21:5.53:88,6,0	1/1:8,1:10:6.02:86,6,0	1/1:5,1:6:3.01:44,3,0
chr10	11639108	.	T	TA	6050.82	PASS	AB=1.000;AC=51;AF=0.911;AN=56;BaseQRankSum=0.005;DP=485;FS=0.000;HRun=3;HaplotypeScore=82.1638;InbreedingCoeff=0.6774;MQ=72.85;MQ0=1;MQRankSum=-1.235;QD=13.42;ReadPosRankSum=-0.165;VQSLOD=3.3629;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:15:27.57:198,28,0	1/1:5,0:5:12.06:54,12,0	0/0:19,0:9:4.80:0,5,91	0/1:14,0:11:13.89:14,0,37	1/1:22,2:24:42.11:267,42,0	1/1:26,0:26:53.14:308,53,0	1/1:7,0:7:18.74:117,19,0	1/1:29,2:31:74.67:504,75,0	1/1:20,0:20:48.56:295,49,0	1/1:17,0:17:32.19:173,32,0	1/1:8,1:9:20.47:141,20,0	1/1:0,16:16:18:214,18,0	1/1:1,15:16:16.86:181,17,0	1/1:2,11:13:24.07:287,24,0	1/1:26,1:27:47.88:375,48,0	1/1:13,2:15:33.12:203,33,0	1/1:22,0:22:40.74:242,41,0	1/1:14,1:15:27.37:153,27,0	1/1:15,3:17:45.74:382,46,0	1/1:20,2:21:42.91:299,43,0	1/1:17,0:17:35.06:203,35,0	1/1:5,6:11:23.08:239,23,0	1/1:15,0:15:33.58:226,34,0	1/1:12,0:12:24.40:117,24,0	0/0:15,0:15:33.03:0,33,337	1/1:21,2:23:60.74:420,61,0	1/1:25,0:25:54.52:295,55,0	1/1:15,0:15:7.79:144,8,0
chr10	11639435	.	TG	T	1150.56	PASS	AB=0.878;AC=44;AF=0.846;AN=52;BaseQRankSum=-4.766;DP=404;FS=7.389;HRun=13;HaplotypeScore=67.6687;InbreedingCoeff=0.4009;MQ=70.77;MQ0=2;MQRankSum=-2.272;QD=3.43;ReadPosRankSum=1.344;VQSLOD=0.0684;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:15,3:18:11.60:73,12,0	1/1:0,2:2:2.98:22,3,0	0/1:42,1:16:5.28:5,0,60	0/0:33,0:15:11.50:0,11,46	1/1:14,3:18:13.18:63,13,0	0/1:10,0:14:2.49:5,0,2	./.	1/1:8,0:17:20.32:65,20,0	1/1:5,1:9:12.30:48,12,0	1/1:15,1:17:13.34:56,13,0	1/1:8,0:9:2.97:21,3,0	0/0:9,0:11:2.52:0,3,12	1/1:6,1:7:0.09:17,0,0	0/0:4,0:10:2.80:0,3,13	1/1:8,0:9:11.19:61,11,0	1/1:7,5:12:23.13:142,23,0	1/1:9,7:19:15.73:153,16,0	1/1:13,3:16:25.69:150,26,0	1/1:10,0:16:14.85:50,15,0	1/1:6,0:12:6.09:18,6,0	1/1:5,0:14:13.97:41,14,0	./.	1/1:15,0:15:4.15:25,4,0	1/1:7,9:17:2.97:22,3,0	1/1:10,0:11:8.85:58,9,0	1/1:8,6:15:16.54:85,17,0	1/1:9,3:11:13.89:75,14,0	1/1:2,3:5:2.98:22,3,0
chr10	11640330	.	TG	T	4535.98	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=11.481;DP=654;FS=4.321;HRun=4;HaplotypeScore=63.4941;InbreedingCoeff=1.0000;MQ=62.53;MQ0=0;MQRankSum=0.389;QD=33.11;ReadPosRankSum=3.804;VQSLOD=5.5773;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:60.18:0,60,822	0/0:14,0:14:42.14:0,42,588	0/0:20,0:19:54.63:0,55,718	0/0:28,0:26:75.25:0,75,1023	0/0:24,0:24:72.24:0,72,1006	1/1:0,30:30:87.27:1044,87,0	1/1:0,18:18:51.16:612,51,0	0/0:29,0:29:75.23:0,75,1020	0/0:19,0:19:57.18:0,57,780	0/0:28,0:28:81.27:0,81,1133	0/0:25,0:25:72.23:0,72,989	1/1:0,17:17:51.16:612,51,0	1/1:0,25:25:66.20:792,66,0	1/1:2,20:22:60.18:720,60,0	0/0:27,0:27:81.26:0,81,1118	0/0:25,0:25:66.21:0,66,907	0/0:23,0:23:69.23:0,69,966	0/0:23,0:23:48.04:0,48,665	0/0:18,0:18:42.14:0,42,588	0/0:31,0:31:90.28:0,90,1227	0/0:20,0:20:54.18:0,54,756	1/1:2,23:25:63.19:756,63,0	0/0:22,0:22:66.22:0,66,919	0/0:22,0:22:63.21:0,63,881	0/0:17,0:17:51.16:0,51,698	0/0:28,0:28:81.27:0,81,1134	0/0:33,0:32:93.29:0,93,1284	0/0:19,0:19:57.19:0,57,798
chr10	11642807	.	CTG	C	1439	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.681;DP=664;FS=8.063;HRun=0;HaplotypeScore=75.1365;InbreedingCoeff=0.9997;MQ=78.32;MQ0=0;MQRankSum=-0.690;QD=37.87;ReadPosRankSum=2.131;VQSLOD=5.1799;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:90.31:0,90,1658	0/0:20,0:20:60.18:0,60,1102	0/0:20,0:20:59.87:0,60,925	0/0:14,0:13:36.10:0,36,646	0/0:32,0:32:93.28:0,93,1682	1/1:0,26:26:69.23:1056,69,0	1/1:0,12:12:33.11:505,33,0	0/0:30,0:30:84.24:0,84,1410	0/0:16,0:16:48.15:0,48,877	0/0:31,0:31:93.27:0,93,1664	0/0:33,0:33:99:0,99,1829	0/0:18,0:18:54.17:0,54,990	0/0:21,0:21:63.19:0,63,1127	0/0:17,0:17:48.13:0,48,842	0/0:32,0:32:93.30:0,93,1705	0/0:19,0:19:57.14:0,57,953	0/0:31,0:31:87.15:0,87,1427	0/0:17,0:17:45.15:0,45,834	0/0:15,0:15:45.11:0,45,734	0/0:35,0:35:96.30:0,96,1715	0/0:15,0:15:45.12:0,45,785	0/0:28,0:28:81.26:0,81,1494	0/0:34,0:34:99:0,99,1792	0/0:12,0:12:36.03:0,36,596	0/0:27,0:27:81.25:0,81,1449	0/0:25,0:25:75.23:0,75,1318	0/0:29,0:29:87.23:0,87,1502	0/0:25,0:25:66.03:0,66,1200
chr10	11644572	.	T	TTTTTC	1578.86	PASS	AB=0.937;AC=11;AF=0.196;AN=56;BaseQRankSum=-2.972;DP=536;FS=3.465;HRun=0;HaplotypeScore=118.5620;InbreedingCoeff=0.2518;MQ=67.98;MQ0=5;MQRankSum=-3.763;QD=10.46;ReadPosRankSum=4.562;VQSLOD=2.6529;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:17:36.18:0,36,285	0/0:7,0:7:17.75:0,18,215	0/0:30,0:17:28.77:0,29,283	0/0:26,0:13:22.25:0,22,208	0/0:21,0:21:53.85:0,54,498	0/1:5,19:25:7.20:618,0,7	1/1:4,14:19:29.99:780,30,0	0/0:22,0:21:23.15:0,23,168	0/0:19,0:19:29.99:0,30,333	0/0:18,0:18:45.18:0,45,394	0/0:26,0:26:41.10:0,41,430	0/1:14,0:9:6.25:44,0,6	0/1:19,0:15:30.36:148,0,30	0/1:10,0:9:4.29:59,0,4	0/0:21,0:21:33.86:0,34,359	0/0:17,0:16:23:0,23,180	0/0:16,0:16:10.81:0,11,143	0/0:19,0:18:13.90:0,14,231	0/1:20,0:19:30.02:30,0,105	0/1:18,0:17:22.08:22,0,135	0/0:10,0:10:4.32:0,4,67	1/1:6,0:6:4:23,4,0	0/0:23,0:23:41.08:0,41,464	0/1:20,0:20:5.23:5,0,126	0/0:21,0:20:54.40:0,54,645	0/0:17,0:16:40.10:0,40,344	0/0:29,0:29:42.12:0,42,477	0/0:25,0:25:50.01:0,50,498
chr10	11644763	.	G	GAGGT	3593.60	PASS	AC=22;AF=0.407;AN=54;BaseQRankSum=4.040;DP=753;FS=1.662;HRun=0;HaplotypeScore=135.5687;InbreedingCoeff=0.9115;MQ=70.91;MQ0=2;MQRankSum=-4.943;QD=11.86;ReadPosRankSum=-5.533;VQSLOD=1.0705;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:48.16:0,48,738	0/0:10,0:10:15.05:0,15,232	1/1:29,0:24:0.94:2,1,0	./.	0/0:31,0:31:24.08:0,24,371	1/1:18,0:18:33.11:677,33,0	1/1:23,0:23:12.01:142,12,0	1/1:49,0:49:46.02:401,46,0	0/0:30,0:30:65.86:0,66,942	0/0:27,0:27:33.09:0,33,445	0/0:16,0:16:12.03:0,12,166	1/1:17,15:33:26.96:633,27,0	1/1:17,12:30:21.38:492,21,0	1/1:8,12:20:24.08:539,24,0	0/0:34,0:34:72.08:0,72,1010	0/0:22,0:21:30.09:0,30,439	0/0:29,0:29:48.13:0,48,695	0/0:20,0:19:30.07:0,30,438	1/1:27,0:27:17.96:213,18,0	1/1:23,0:23:15.35:169,15,0	1/1:31,0:31:14.90:115,15,0	1/1:14,5:20:9.03:211,9,0	0/0:29,0:29:29.92:0,30,442	0/0:34,0:34:45.14:0,45,675	0/0:27,0:27:24.04:0,24,345	0/0:28,0:28:45.14:0,45,671	0/0:28,0:28:42.07:0,42,583	0/0:6,0:6:0.90:0,1,62
chr10	11644807	.	T	TAGG	736.32	PASS	AB=0.959;AC=7;AF=0.125;AN=56;BaseQRankSum=8.783;DP=704;FS=0.515;HRun=0;HaplotypeScore=125.8959;InbreedingCoeff=-0.1428;MQ=72.48;MQ0=3;MQRankSum=-2.902;QD=4.14;ReadPosRankSum=-0.122;VQSLOD=2.5113;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,113,1845	0/0:9,0:9:27.09:0,27,458	0/0:32,0:29:81.27:0,81,1215	0/0:30,0:26:78.12:0,78,1071	0/0:16,0:16:45.15:0,45,760	0/1:12,8:20:99:300,0,150	0/0:15,1:16:28.99:0,29,251	0/1:52,0:52:74.61:75,0,1466	0/0:35,0:35:99:0,102,1682	0/0:20,0:20:60.20:0,60,981	0/0:12,0:12:30.09:0,30,463	0/1:25,0:25:99:166,0,473	0/1:28,0:28:99:107,0,607	0/1:21,0:21:99:139,0,342	0/0:31,0:31:90.17:0,90,1527	0/0:19,0:19:54.18:0,54,910	0/0:28,0:28:84.27:0,84,1400	0/0:17,0:17:51.03:0,51,808	0/1:24,0:24:22.44:22,0,722	0/0:21,0:21:35.31:0,35,715	0/0:46,0:46:36.70:0,37,1310	0/1:8,0:8:57.77:58,0,91	0/0:22,0:22:66.20:0,66,1044	0/0:32,0:32:96.15:0,96,1535	0/0:27,0:27:81:0,81,1231	0/0:29,0:29:84.28:0,84,1400	0/0:27,0:27:81.21:0,81,1292	0/0:18,0:18:54.14:0,54,767
chr10	11646370	.	C	CT	8036.18	PASS	AC=48;AF=0.960;AN=50;BaseQRankSum=-0.723;DP=218;FS=0.000;HRun=1;HaplotypeScore=140.3535;InbreedingCoeff=0.3002;MQ=33.55;MQ0=0;MQRankSum=-1.732;QD=37.20;ReadPosRankSum=1.370;VQSLOD=4.4004;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,2:2:3.01:45,3,0	1/1:0,2:2:6.02:90,6,0	0/0:1,0:1:1.82:0,2,5	./.	1/1:0,10:10:11.92:179,12,0	1/1:0,5:5:15.05:224,15,0	1/1:0,4:4:12.04:179,12,0	1/1:1,6:7:18.03:246,18,0	1/1:3,8:11:24.08:358,24,0	1/1:0,14:14:39.13:581,39,0	1/1:1,6:7:12.04:179,12,0	1/1:0,14:14:33.11:493,33,0	1/1:1,9:10:30.06:424,30,0	1/1:1,7:8:11.99:179,12,0	1/1:0,11:11:24.08:359,24,0	1/1:1,6:7:15.05:224,15,0	1/1:1,0:1:3.01:39,3,0	./.	1/1:1,2:3:8.99:110,9,0	1/1:2,19:21:54.18:807,54,0	1/1:2,3:5:6.02:90,6,0	1/1:0,18:18:54.18:807,54,0	1/1:0,8:8:24.08:359,24,0	./.	1/1:0,22:22:63.21:942,63,0	1/1:1,9:10:27.09:404,27,0	1/1:0,13:13:39.13:583,39,0	1/1:0,3:3:9.03:135,9,0
chr10	11646377	.	A	AT	9380.32	PASS	AC=48;AF=0.960;AN=50;BaseQRankSum=-0.701;DP=257;FS=0.000;HRun=1;HaplotypeScore=168.0489;InbreedingCoeff=0.3819;MQ=32.90;MQ0=0;MQRankSum=-1.732;QD=36.79;ReadPosRankSum=1.088;VQSLOD=4.3874;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,2:6:6.02:90,6,0	1/1:0,3:3:6.02:90,6,0	0/0:1,0:1:1.82:0,2,5	./.	1/1:0,12:12:20.90:289,21,0	1/1:0,5:5:15.02:200,15,0	1/1:0,4:4:12.04:179,12,0	1/1:1,7:8:18.06:269,18,0	1/1:2,12:14:33.11:485,33,0	1/1:1,15:16:42.14:628,42,0	1/1:1,7:8:18.06:269,18,0	1/1:0,15:15:42.14:628,42,0	1/1:1,11:12:33.08:469,33,0	1/1:1,8:9:21.02:314,21,0	1/1:1,13:14:36.12:538,36,0	1/1:1,8:9:21.07:314,21,0	1/1:0,1:1:3.01:45,3,0	./.	1/1:0,4:4:12.04:180,12,0	1/1:1,21:22:60.12:847,60,0	1/1:1,5:6:12.04:179,12,0	1/1:1,18:19:54.14:782,54,0	1/1:1,9:10:24.08:358,24,0	./.	1/1:1,22:23:66.22:986,66,0	1/1:3,12:15:36.12:530,36,0	1/1:4,13:17:42.06:578,42,0	1/1:0,3:3:9.03:135,9,0
chr10	11646385	.	G	GT	9829.56	PASS	AC=50;AF=0.962;AN=52;BaseQRankSum=-1.624;DP=285;FS=0.000;HRun=2;HaplotypeScore=193.1796;InbreedingCoeff=0.3422;MQ=38.92;MQ0=0;MQRankSum=-0.185;QD=34.86;ReadPosRankSum=2.386;VQSLOD=4.2317;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,6:8:12.04:172,12,0	1/1:1,4:5:9.03:129,9,0	0/0:3,0:3:1.55:0,2,4	./.	1/1:1,12:13:20.93:301,21,0	1/1:1,4:5:9.03:129,9,0	1/1:0,4:4:12.04:172,12,0	1/1:2,9:11:27.09:388,27,0	1/1:0,14:14:39.13:560,39,0	1/1:2,17:19:54.18:763,54,0	1/1:2,7:9:17.73:227,18,0	1/1:3,15:18:45.15:642,45,0	1/1:2,11:13:36.08:494,36,0	1/1:0,10:10:24.08:345,24,0	1/1:1,14:15:39.13:560,39,0	1/1:1,9:10:24.08:342,24,0	1/1:0,1:1:3.01:43,3,0	./.	1/1:2,3:5:9.03:130,9,0	1/1:2,20:22:60.20:862,60,0	1/1:0,6:6:18.06:259,18,0	1/1:2,17:19:51.17:732,51,0	1/1:1,10:11:27.09:388,27,0	1/1:2,1:3:3.01:43,3,0	1/1:2,21:23:63.21:905,63,0	1/1:1,15:16:38.24:598,38,0	1/1:3,16:19:36.12:517,36,0	1/1:0,3:3:9.03:129,9,0
chr10	11646406	.	T	TA	11744.09	PASS	AB=0.867;AC=53;AF=0.946;AN=56;BaseQRankSum=5.099;DP=336;FS=62.861;HRun=2;HaplotypeScore=199.7036;InbreedingCoeff=0.4582;MQ=72.32;MQ0=0;MQRankSum=-6.435;QD=36.02;ReadPosRankSum=4.564;VQSLOD=-0.6387;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,12:14:27.09:388,27,0	1/1:0,5:5:12.04:172,12,0	0/1:11,2:13:75.33:75,0,115	0/0:10,0:10:13.38:0,13,81	1/1:3,11:15:21.07:296,21,0	1/1:0,4:4:12.04:172,12,0	1/1:0,5:5:14.96:169,15,0	1/1:4,11:15:36.11:500,36,0	1/1:0,15:15:42.14:603,42,0	1/1:1,18:19:54.18:766,54,0	1/1:1,5:6:12.04:172,12,0	1/1:2,20:22:57.19:819,57,0	1/1:1,15:16:45.15:642,45,0	1/1:1,9:10:27.09:387,27,0	1/1:0,22:22:60.20:861,60,0	1/1:1,10:11:30.10:427,30,0	1/1:0,3:3:6.02:86,6,0	1/1:0,2:2:3.01:43,3,0	1/1:0,6:6:18.06:258,18,0	1/1:5,17:22:51.17:732,51,0	1/1:1,6:7:18.06:258,18,0	1/1:0,19:19:54.18:775,54,0	1/1:0,11:11:33.11:474,33,0	1/1:0,4:4:12.04:172,12,0	1/1:1,19:20:57.19:814,57,0	1/1:0,17:17:48.16:690,48,0	1/1:0,19:19:57.19:819,57,0	1/1:0,4:4:12.04:172,12,0
chr10	11646464	.	TG	T	5427.24	PASS	AB=0.856;AC=53;AF=0.946;AN=56;BaseQRankSum=-3.824;DP=421;FS=0.000;HRun=1;HaplotypeScore=171.1507;InbreedingCoeff=-0.0755;MQ=66.70;MQ0=0;MQRankSum=-0.813;QD=12.89;ReadPosRankSum=4.958;VQSLOD=3.9527;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:26,1:27:21.22:224,21,0	1/1:7,0:7:14.13:91,14,0	0/1:9,3:12:44.82:60,0,45	0/1:7,3:10:24.83:68,0,25	1/1:18,0:18:21:195,21,0	1/1:12,0:12:25.89:148,26,0	1/1:15,0:15:31.96:190,32,0	0/1:24,0:24:34.24:234,0,34	1/1:17,0:17:13.78:226,14,0	1/1:13,0:13:36.91:198,37,0	1/1:14,0:14:33.35:221,33,0	1/1:26,0:26:63.99:403,64,0	1/1:18,0:18:47.03:317,47,0	1/1:15,0:15:34.69:219,35,0	1/1:29,1:30:52.58:474,53,0	1/1:17,0:17:40.62:239,41,0	1/1:8,0:8:17.54:109,18,0	1/1:6,0:6:17.43:102,17,0	1/1:11,0:11:12.79:117,13,0	1/1:12,0:12:29.22:174,29,0	1/1:18,0:18:22.77:126,23,0	1/1:9,0:9:23.20:135,23,0	1/1:13,0:13:1.09:143,1,0	1/1:12,0:12:9.03:135,9,0	1/1:13,0:13:37.90:229,38,0	1/1:17,0:17:8.21:198,8,0	1/1:23,0:23:64.34:387,64,0	1/1:4,0:4:11.71:70,12,0
chr10	11647623	.	T	TAC	3230.05	PASS	AB=0.815;AC=8;AF=0.143;AN=56;BaseQRankSum=-8.708;DP=692;FS=1.491;HRun=0;HaplotypeScore=86.3004;InbreedingCoeff=0.6450;MQ=65.81;MQ0=1;MQRankSum=0.934;QD=24.29;ReadPosRankSum=0.479;VQSLOD=4.2666;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:74.83:0,75,855	0/0:11,0:11:24.07:0,24,293	0/0:20,0:11:14.49:0,14,141	0/1:26,0:18:30.36:30,0,163	0/0:28,0:28:69.22:0,69,841	0/0:13,0:14:38.94:0,39,443	0/0:24,0:24:38.73:0,39,447	0/0:35,1:36:20.38:0,20,715	0/0:20,0:20:51.16:0,51,619	0/0:28,0:28:69.20:0,69,820	0/0:25,1:26:14.53:0,15,684	1/1:6,32:38:4.95:1094,5,0	1/1:9,14:24:54.18:869,54,0	1/1:6,21:28:26.57:936,27,0	0/0:20,0:22:62.86:0,63,723	0/0:27,0:27:66.16:0,66,892	0/0:27,0:27:75.20:0,75,896	0/0:6,0:6:12.01:0,12,132	0/0:19,0:19:39.06:0,39,430	0/0:36,0:37:87.09:0,87,1022	0/0:35,0:38:74.84:0,75,831	0/1:7,10:17:70.82:448,0,71	0/0:23,0:23:57.16:0,57,684	0/0:30,0:30:81.14:0,81,929	0/0:28,0:28:84.25:0,84,1015	0/0:29,0:31:74.06:0,74,804	0/0:19,0:21:56.81:0,57,633	0/0:7,0:7:15.05:0,15,183
chr10	11647712	.	C	CT	6217.54	PASS	AB=0.733;AC=40;AF=0.714;AN=56;BaseQRankSum=-7.773;DP=612;FS=13.656;HRun=12;HaplotypeScore=74.0687;InbreedingCoeff=0.4527;MQ=69.79;MQ0=9;MQRankSum=0.306;QD=13.03;ReadPosRankSum=2.948;VQSLOD=3.5826;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,21:30:25.85:449,26,0	1/1:5,3:9:14.45:112,14,0	0/0:44,0:20:26.11:0,26,196	0/1:24,0:13:16.03:24,0,16	1/1:11,20:32:0.28:464,0,0	1/1:2,11:14:23.87:219,24,0	0/1:8,11:21:30.65:176,0,31	0/0:39,1:40:27.89:0,28,372	1/1:4,9:13:15.02:146,15,0	1/1:10,17:27:35.14:487,35,0	1/1:8,11:21:17.16:212,17,0	1/1:11,10:21:1.10:315,1,0	1/1:4,6:11:17.08:197,17,0	1/1:8,11:20:43.70:388,44,0	0/1:11,17:28:1.58:306,0,2	1/1:5,13:18:8.14:240,8,0	1/1:3,22:25:26.30:416,26,0	1/1:3,18:21:7.88:224,8,0	0/0:18,0:18:35.76:0,36,262	0/1:22,2:26:7.48:7,0,266	0/0:6,0:6:14.87:0,15,106	0/1:7,7:14:35.68:174,0,36	1/1:5,15:20:15.76:197,16,0	1/1:2,11:13:24.04:233,24,0	0/0:24,0:26:60.42:0,60,417	1/1:7,19:26:53.73:506,54,0	0/1:6,17:25:2.12:317,0,2	1/1:1,15:17:32.88:408,33,0
chr10	11649236	.	TAA	T	3490.90	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=8.223;DP=638;FS=0.000;HRun=15;HaplotypeScore=79.9151;InbreedingCoeff=0.8958;MQ=71.55;MQ0=1;MQRankSum=0.934;QD=13.80;ReadPosRankSum=6.711;VQSLOD=2.6264;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:48.08:0,48,550	0/0:6,0:7:18.04:0,18,215	0/1:25,0:18:23.43:23,0,251	0/0:10,0:6:3.01:0,3,31	0/0:26,1:28:35.71:0,36,594	1/1:11,25:37:71.52:619,72,0	1/1:1,13:16:29.58:294,30,0	1/1:10,19:31:47.38:443,47,0	0/0:26,0:25:60.12:0,60,746	0/0:27,0:27:59.29:0,59,680	0/0:13,0:16:45.01:0,45,497	1/1:5,20:26:38.28:328,38,0	1/1:8,18:26:38.89:343,39,0	1/1:5,12:19:38.32:301,38,0	0/0:29,0:32:77.04:0,77,851	0/0:29,0:29:69.09:0,69,775	0/0:37,0:37:92.56:0,93,954	0/0:13,0:14:35.83:0,36,409	1/1:7,14:23:23.81:313,24,0	1/1:4,20:25:47.39:406,47,0	1/1:1,9:10:20.99:185,21,0	1/1:4,9:15:29.32:235,29,0	0/0:13,0:17:32.03:0,32,324	0/0:18,0:20:56.58:0,57,632	0/0:28,0:30:83.66:0,84,1008	0/0:18,0:22:40.67:0,41,489	0/0:39,0:40:99:0,103,1110	0/0:7,0:10:18.04:0,18,215
chr10	11650591	.	CT	C	20784.92	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=0.997;DP=634;FS=1.817;HRun=2;HaplotypeScore=63.2461;InbreedingCoeff=0.9988;MQ=71.11;MQ0=0;MQRankSum=-7.986;QD=35.90;ReadPosRankSum=4.218;VQSLOD=5.3847;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,35:35:99:1324,102,0	1/1:0,9:9:27.09:351,27,0	0/0:12,0:12:36.11:0,36,511	0/0:24,0:24:66.21:0,66,934	1/1:0,31:31:90.29:1167,90,0	1/1:0,36:36:99:1402,108,0	1/1:0,18:18:48.16:623,48,0	1/1:1,31:32:87.25:1089,87,0	1/1:0,15:15:42.14:545,42,0	1/1:0,17:17:48.16:622,48,0	1/1:0,17:17:48.16:623,48,0	1/1:1,19:20:54.17:696,54,0	1/1:1,29:30:81.10:1052,81,0	1/1:1,24:25:72.23:935,72,0	1/1:0,31:31:75.24:974,75,0	1/1:1,27:28:78.25:1013,78,0	1/1:0,23:23:63.20:818,63,0	1/1:0,18:18:51.17:662,51,0	1/1:1,20:21:60.19:776,60,0	1/1:0,30:30:84.27:1090,84,0	1/1:0,17:17:51.17:662,51,0	1/1:0,15:15:45.15:584,45,0	1/1:0,22:22:60.20:779,60,0	1/1:0,20:20:42.14:545,42,0	0/0:19,0:19:54.18:0,54,809	1/1:1,28:29:84.27:1090,84,0	1/1:0,31:31:81.26:1051,81,0	1/1:0,9:9:24.08:312,24,0
chr10	11651656	.	GT	G	13722.76	PASS	AB=0.875;AC=54;AF=0.964;AN=56;BaseQRankSum=2.990;DP=488;FS=3.222;HRun=1;HaplotypeScore=86.3958;InbreedingCoeff=-0.0433;MQ=71.64;MQ0=4;MQRankSum=-0.578;QD=28.12;ReadPosRankSum=6.342;VQSLOD=4.6017;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,33:34:95.80:1136,96,0	1/1:1,5:6:10.09:170,10,0	0/1:10,4:11:7.83:59,0,8	0/1:16,1:9:24.71:67,0,25	1/1:1,6:6:18.05:215,18,0	1/1:2,12:14:38.04:450,38,0	1/1:2,20:22:59.65:716,60,0	1/1:9,5:14:15.52:184,16,0	1/1:1,11:12:28.95:353,29,0	1/1:1,13:14:39.11:458,39,0	1/1:0,12:12:33.10:386,33,0	1/1:0,18:18:48.15:578,48,0	1/1:3,23:26:66.35:796,66,0	1/1:1,13:14:33.57:404,34,0	1/1:0,21:21:51.15:608,51,0	1/1:1,17:18:45.13:536,45,0	1/1:1,31:32:86.14:1030,86,0	1/1:1,25:26:68.72:828,69,0	1/1:3,11:13:26.60:313,27,0	1/1:4,9:13:32.42:385,32,0	1/1:5,15:18:44.16:537,44,0	1/1:2,9:11:23.56:310,24,0	1/1:1,14:15:40.34:481,40,0	1/1:2,23:25:60:726,60,0	1/1:1,16:17:32.40:535,32,0	1/1:2,14:16:42.60:503,43,0	1/1:0,30:30:78.23:919,78,0	1/1:0,2:2:3.01:38,3,0
chr10	11652287	.	TCAAAACAAAACAAAA	T	5742.14	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=8.932;DP=709;FS=12.236;HRun=0;HaplotypeScore=288.1622;InbreedingCoeff=0.9686;MQ=74.79;MQ0=4;MQRankSum=-10.544;QD=51.73;ReadPosRankSum=1.952;VQSLOD=2.9170;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:86.51:0,87,5391	0/0:12,0:12:30.10:0,30,1926	0/0:46,0:38:33.11:0,33,1348	0/0:29,0:19:14.97:0,15,448	0/0:35,0:35:77.96:0,78,4211	1/1:9,11:20:24.08:1005,24,0	1/1:11,7:18:9.03:377,9,0	0/0:16,0:22:30.09:0,30,884	0/0:27,0:27:69.24:0,69,4433	0/0:25,0:25:48.16:0,48,3111	0/0:16,0:16:36.10:0,36,2193	1/1:9,9:18:24.08:1002,24,0	1/1:7,14:21:30.10:1256,30,0	1/1:5,9:14:18.06:754,18,0	0/0:35,0:35:78.27:0,78,4963	0/0:36,0:36:66.19:0,66,3867	0/0:36,0:37:84.22:0,84,4947	0/0:19,0:18:33.11:0,33,2180	0/0:17,0:20:21.07:0,21,539	0/0:9,0:25:48.16:0,48,1548	0/0:4,0:7:9.03:0,9,308	1/1:8,12:20:33.11:1348,33,0	0/0:31,0:31:69.24:0,69,4796	0/0:28,0:28:75.24:0,75,5026	0/0:35,0:35:75.25:0,75,4687	0/0:31,0:31:69.23:0,69,4492	0/0:37,0:37:84.28:0,84,4721	0/0:8,0:8:21.07:0,21,961
chr10	11653203	.	GAC	G	17050.51	PASS	AB=0.933;AC=54;AF=0.964;AN=56;BaseQRankSum=-0.878;DP=495;FS=5.080;HRun=0;HaplotypeScore=273.4132;InbreedingCoeff=-0.0484;MQ=58.77;MQ0=0;MQRankSum=-1.601;QD=34.45;ReadPosRankSum=2.294;VQSLOD=4.4634;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:31:59.92:852,60,0	1/1:12,0:12:33.11:474,33,0	0/1:7,0:7:26.83:157,0,27	0/1:11,2:13:49.41:320,0,49	1/1:20,0:20:33.10:462,33,0	1/1:17,0:17:36.09:524,36,0	1/1:13,0:13:24.03:353,24,0	1/1:31,0:31:77.52:1113,78,0	1/1:22,0:22:62.79:863,63,0	1/1:25,0:25:71.91:1020,72,0	1/1:20,0:20:35.99:528,36,0	1/1:26,0:25:69.20:1012,69,0	1/1:15,1:16:39.13:572,39,0	1/1:20,1:21:54.08:792,54,0	1/1:30,0:30:81.07:1152,81,0	1/1:23,0:23:66.19:970,66,0	1/1:14,0:14:33.03:484,33,0	1/1:9,0:8:24.05:348,24,0	1/1:11,0:11:23.97:351,24,0	1/1:23,0:23:60.20:881,60,0	1/1:5,0:5:5.89:59,6,0	1/1:21,0:21:41.98:616,42,0	1/1:20,0:20:51.17:748,51,0	1/1:7,0:7:2.93:44,3,0	1/1:25,0:25:63.19:916,63,0	1/1:14,0:14:42.14:604,42,0	1/1:13,1:14:42.14:617,42,0	1/1:5,0:5:15.05:220,15,0
chr10	11653212	.	GA	G	5822.18	PASS	AB=0.981;AC=47;AF=0.839;AN=56;BaseQRankSum=8.643;DP=488;FS=10.854;HRun=1;HaplotypeScore=329.8068;InbreedingCoeff=-0.1850;MQ=53.80;MQ0=0;MQRankSum=-2.252;QD=11.93;ReadPosRankSum=9.322;VQSLOD=2.2046;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:29:19.10:217,0,19	1/1:10,1:11:23.55:159,24,0	0/1:5,0:5:12.41:33,0,12	0/1:12,0:12:33.81:34,0,81	1/1:17,0:17:25.99:152,26,0	0/1:15,0:15:3.61:156,0,4	1/1:15,0:15:16.44:165,16,0	0/1:30,0:30:18.81:272,0,19	1/1:22,1:23:43.86:344,44,0	0/1:22,0:22:27.04:186,0,27	1/1:21,1:22:32.12:203,32,0	1/1:20,5:24:42.37:419,42,0	1/1:11,2:13:38.23:253,38,0	1/1:17,2:19:9.33:285,9,0	1/1:23,4:27:54.88:441,55,0	1/1:25,1:26:8.91:285,9,0	1/1:14,1:15:37.96:244,38,0	1/1:12,1:12:33.10:185,33,0	0/1:16,0:16:39.47:128,0,39	1/1:22,1:23:64.36:397,64,0	0/1:5,0:5:11.92:12,0,15	1/1:20,0:20:15.33:191,15,0	1/1:16,0:16:40.87:250,41,0	1/1:8,0:8:5.88:36,6,0	1/1:24,0:24:34.04:284,34,0	1/1:14,0:14:1.03:148,1,0	1/1:16,2:18:22.16:276,22,0	0/1:4,1:5:5.21:68,0,5
chr10	11654379	.	A	AT	4221.49	PASS	AB=0.723;AC=32;AF=0.571;AN=56;BaseQRankSum=-5.984;DP=576;FS=12.523;HRun=14;HaplotypeScore=72.3558;InbreedingCoeff=0.4822;MQ=68.30;MQ0=0;MQRankSum=1.057;QD=10.50;ReadPosRankSum=0.877;VQSLOD=3.2355;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,11:16:14.57:199,15,0	0/1:3,5:8:37.92:38,0,43	0/0:17,0:14:9.18:0,9,90	0/0:5,0:5:2.73:0,3,19	0/1:13,18:31:13.02:241,0,13	1/1:6,11:17:26.99:238,27,0	1/1:7,3:10:11.97:100,12,0	0/0:35,0:36:46.05:0,46,291	1/1:7,11:18:1.73:139,2,0	1/1:12,16:29:24.46:411,24,0	0/1:18,15:36:8.93:480,0,9	0/0:27,0:28:60.85:0,61,378	0/0:15,0:15:26.51:0,27,173	0/1:11,1:12:2.71:3,0,108	1/1:6,13:19:1.63:129,2,0	1/1:3,13:17:19.57:285,20,0	1/1:4,11:15:18:158,18,0	1/1:6,16:22:38.99:342,39,0	0/0:12,0:12:14.69:0,15,96	0/1:26,4:31:31.35:31,0,231	0/0:6,0:9:18.83:0,19,108	0/0:23,0:24:52.75:0,53,330	1/1:3,21:25:35.73:305,36,0	1/1:3,8:11:9:79,9,0	0/0:27,0:27:56.04:0,56,365	0/1:10,19:29:19.16:330,0,19	1/1:10,32:43:8.49:542,8,0	1/1:4,8:13:20.84:172,21,0
chr10	11655584	.	TC	T	3998.13	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=11.424;DP=764;FS=2.198;HRun=3;HaplotypeScore=72.0748;InbreedingCoeff=0.9913;MQ=81.04;MQ0=0;MQRankSum=-0.542;QD=32.51;ReadPosRankSum=-4.361;VQSLOD=2.0232;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:57:99:0,156,2207	0/0:11,0:11:33.10:0,33,456	0/0:21,0:21:53.94:0,54,683	0/0:18,0:18:45.15:0,45,616	0/0:23,0:23:69.20:0,69,950	0/0:26,0:26:75.22:0,75,1026	0/0:29,0:29:87.28:0,87,1233	1/1:0,43:43:99:1548,129,0	0/0:26,0:26:78.24:0,78,1088	0/0:26,0:26:78.24:0,78,1077	0/0:19,0:19:54.17:0,54,758	0/0:24,0:24:72.23:0,72,1018	0/0:42,0:42:99:0,126,1794	0/0:29,0:29:81.26:0,81,1145	0/0:37,0:37:99:0,105,1472	0/0:32,0:32:96.29:0,96,1331	0/0:38,0:38:99:0,114,1560	0/0:19,0:19:57.17:0,57,800	1/1:0,25:25:75.19:889,75,0	1/1:1,12:13:33.10:409,33,0	1/1:2,40:42:93.29:1152,93,0	0/0:25,0:25:69.23:0,69,992	0/0:24,0:24:69.21:0,69,958	0/0:37,0:37:99:0,111,1598	0/0:23,0:23:69.23:0,69,993	0/0:27,0:27:81.26:0,81,1149	0/0:24,0:24:72.21:0,72,1012	0/0:4,0:4:12.04:0,12,173
chr10	11656646	.	C	CGCTTAGCGAG	2810.23	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-1.178;DP=765;FS=0.000;HRun=0;HaplotypeScore=251.0622;InbreedingCoeff=0.9840;MQ=86.33;MQ0=0;MQRankSum=-5.751;QD=25.55;ReadPosRankSum=-5.806;VQSLOD=1.6838;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,105,3009	0/0:9,0:9:18.06:0,18,493	0/0:28,0:28:15.05:0,15,293	0/0:23,0:23:23.96:0,24,508	0/0:23,0:23:51.17:0,51,1497	0/0:26,0:26:66.12:0,66,1742	0/0:25,0:25:48.07:0,48,1231	1/1:34,0:34:25.31:707,25,0	0/0:35,0:35:60.21:0,60,1739	0/0:18,0:18:39.13:0,39,1038	0/0:14,0:14:27.09:0,27,790	0/0:30,0:30:66.23:0,66,1921	0/0:23,0:23:48.12:0,48,1367	0/0:30,0:30:63.18:0,63,1727	0/0:46,0:46:90.25:0,90,2584	0/0:37,0:37:69.19:0,69,1970	0/0:28,0:28:60.21:0,60,1736	0/0:35,0:35:69.24:0,69,1940	1/1:23,0:23:19.31:606,19,0	1/1:10,6:18:27.09:1260,27,0	1/1:28,5:35:19.26:396,19,0	0/0:24,0:24:54.13:0,54,1349	0/0:26,0:26:60.16:0,60,1726	0/0:27,0:27:60.15:0,60,1588	0/0:31,0:31:60.21:0,60,1772	0/0:29,0:29:57.15:0,57,1595	0/0:33,0:33:60.07:0,60,1567	0/0:6,0:6:15.05:0,15,449
chr10	11656909	.	C	CCG	3573.09	PASS	AB=0.500;AC=49;AF=0.875;AN=56;BaseQRankSum=-0.297;DP=286;FS=31.276;HRun=0;HaplotypeScore=58.4176;InbreedingCoeff=0.6696;MQ=92.19;MQ0=1;MQRankSum=-4.781;QD=16.47;ReadPosRankSum=-4.059;VQSLOD=1.2615;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:12,0:12:26.59:212,27,0	1/1:4,0:4:11.86:84,12,0	0/0:31,0:23:31.07:0,31,371	0/0:16,0:14:19.68:0,20,267	1/1:3,0:3:2.99:24,3,0	1/1:11,0:11:23.66:170,24,0	1/1:0,2:11:8.94:84,9,0	1/1:1,0:13:26.91:272,27,0	1/1:11,0:11:29.80:220,30,0	1/1:9,0:10:29.46:232,29,0	1/1:3,0:3:5.94:41,6,0	1/1:3,12:20:15.10:274,15,0	1/1:1,12:15:24.08:441,24,0	1/1:0,8:12:20.99:350,21,0	1/1:0,0:6:2.99:24,3,0	1/1:6,0:6:8.99:74,9,0	0/1:0,4:7:0:0,0,0	1/1:8,0:8:14.66:100,15,0	1/1:1,2:12:22.90:187,23,0	1/1:2,0:8:14.73:107,15,0	1/1:0,1:8:3.48:37,3,0	1/1:7,0:7:14.94:133,15,0	1/1:6,0:6:11.95:93,12,0	1/1:4,1:5:8.96:97,9,0	0/0:21,0:21:57.11:0,57,730	1/1:0,0:12:26.62:196,27,0	1/1:5,0:5:11.82:99,12,0	1/1:2,0:2:2.98:21,3,0
chr10	11657203	.	GA	G	8750.20	PASS	AB=1.000;AC=52;AF=0.929;AN=56;BaseQRankSum=4.854;DP=579;FS=23.201;HRun=10;HaplotypeScore=72.7890;InbreedingCoeff=0.4940;MQ=64.60;MQ0=1;MQRankSum=-1.642;QD=15.85;ReadPosRankSum=4.019;VQSLOD=3.7083;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,37:39:99:938,108,0	1/1:0,4:4:12:104,12,0	0/1:8,0:5:7.62:8,0,55	0/1:8,0:6:6.39:6,0,118	1/1:2,12:14:32.99:286,33,0	1/1:29,0:29:0.47:4,0,0	1/1:26,0:26:1.55:7,2,0	1/1:2,22:24:65.96:569,66,0	1/1:5,24:29:71.98:625,72,0	1/1:2,18:20:53.97:465,54,0	1/1:1,11:12:32.99:286,33,0	1/1:14,0:14:17.10:46,17,0	1/1:20,0:20:25.30:68,25,0	1/1:22,0:22:23.31:62,23,0	1/1:1,27:28:68.98:599,69,0	1/1:4,26:30:71.98:625,72,0	1/1:7,23:30:62.97:547,63,0	1/1:2,14:16:41.99:365,42,0	1/1:6,18:24:23.74:422,24,0	1/1:6,22:28:59.96:521,60,0	1/1:3,24:28:71.02:605,71,0	1/1:14,0:14:15.25:41,15,0	1/1:3,16:19:47.98:417,48,0	1/1:5,18:23:11.81:331,12,0	0/0:26,1:27:46.10:0,46,709	1/1:4,5:9:14.97:125,15,0	1/1:2,17:19:41.98:365,42,0	1/1:2,13:15:35.98:312,36,0
chr10	11657211	.	AAAC	A	2694.45	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=0.397;DP=594;FS=0.000;HRun=0;HaplotypeScore=118.6912;InbreedingCoeff=0.9006;MQ=69.00;MQ0=1;MQRankSum=2.839;QD=21.22;ReadPosRankSum=3.088;VQSLOD=3.4767;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,117,1064	0/0:8,0:8:23.79:0,24,198	0/1:10,0:7:7.43:7,0,162	0/0:13,0:11:8.49:0,8,359	0/0:14,0:14:39.02:0,39,370	1/1:25,0:25:49.91:174,50,0	1/1:23,1:24:42.94:186,43,0	0/0:31,0:31:88.28:0,88,777	0/0:24,0:24:71.99:0,72,631	0/0:26,0:26:75.88:0,76,670	0/0:14,0:14:41.67:0,42,337	1/1:0,14:14:33.11:514,33,0	1/1:2,18:20:51.11:748,51,0	1/1:1,18:19:45.15:701,45,0	0/0:31,0:31:81.04:0,81,758	0/0:30,0:30:84.04:0,84,769	0/0:29,0:29:75.06:0,75,722	0/0:17,0:17:51.01:0,51,462	0/0:21,0:21:60.51:0,61,594	0/0:28,0:28:80.95:0,81,763	0/0:29,0:29:83.49:0,83,767	1/1:0,15:15:44.91:554,45,0	0/0:19,0:19:53.98:0,54,469	0/0:19,0:19:45.03:0,45,430	0/0:25,0:25:75.22:0,75,1506	0/0:6,0:6:17.96:0,18,157	0/0:20,0:19:53.96:0,54,491	0/0:22,0:22:56.90:0,57,482
chr10	11657212	.	AAC	A	2543.62	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=3.288;DP=590;FS=0.411;HRun=0;HaplotypeScore=107.4082;InbreedingCoeff=0.9938;MQ=69.22;MQ0=1;MQRankSum=0.174;QD=21.93;ReadPosRankSum=3.508;VQSLOD=4.0782;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,113,656	0/0:8,0:8:23.32:0,23,137	0/0:10,0:7:13.23:0,13,152	0/0:13,0:11:24.18:0,24,263	0/0:15,0:15:40.90:0,41,258	1/1:0,25:25:60.20:838,60,0	1/1:1,23:24:51.15:695,51,0	0/0:31,0:31:89.18:0,89,572	0/0:24,0:24:69.58:0,70,377	0/0:26,0:26:74.14:0,74,483	0/0:14,0:14:40.42:0,40,221	1/1:14,0:14:32.73:228,33,0	1/1:20,0:20:50.51:351,51,0	1/1:18,0:18:44.64:311,45,0	0/0:31,0:31:78.75:0,79,476	0/0:30,0:30:81.66:0,82,495	0/0:27,0:27:72.92:0,73,444	0/0:17,0:17:49.61:0,50,292	0/0:21,0:21:58.86:0,59,382	0/0:28,0:28:78.82:0,79,502	0/0:29,0:29:72.59:0,73,482	1/1:15,0:15:44.59:310,45,0	0/0:18,0:18:51.76:0,52,290	0/0:19,0:19:43.65:0,44,262	0/0:25,0:25:69.13:0,69,1137	0/0:8,0:8:23.53:0,24,156	0/0:20,0:19:52.55:0,53,327	0/0:20,0:20:55.66:0,56,349
chr10	11657550	.	CTT	C	8293.92	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=18.257;DP=555;FS=5.086;HRun=3;HaplotypeScore=146.7850;InbreedingCoeff=0.9971;MQ=86.54;MQ0=0;MQRankSum=-17.932;QD=23.97;ReadPosRankSum=1.121;VQSLOD=3.3321;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,19:27:42.06:406,42,0	1/1:0,8:8:24.02:228,24,0	0/0:25,0:25:72.21:0,72,1289	0/0:27,0:27:78.27:0,78,1430	1/1:1,16:17:42.05:394,42,0	0/0:17,0:17:51.17:0,51,978	0/0:28,0:28:81.28:0,81,1553	1/1:7,18:25:57.13:588,57,0	1/1:3,22:25:69.13:691,69,0	1/1:1,13:14:41.68:404,42,0	1/1:2,10:12:30.05:291,30,0	0/0:22,0:22:63.22:0,63,1209	0/0:21,0:21:60.21:0,60,1137	0/0:23,0:23:69.23:0,69,1302	1/1:3,21:24:69.12:671,69,0	1/1:1,24:25:75.12:728,75,0	1/1:3,17:20:51:481,51,0	1/1:3,12:15:42.05:419,42,0	1/1:7,8:15:27.06:277,27,0	1/1:3,16:19:39.03:365,39,0	1/1:5,10:15:24.03:229,24,0	0/0:19,0:19:57.20:0,57,1101	1/1:2,11:13:30.04:285,30,0	1/1:6,9:15:18.03:176,18,0	0/0:27,0:27:81.28:0,81,1553	1/1:1,18:19:54.12:551,54,0	1/1:3,28:31:90.17:894,90,0	1/1:0,7:7:21.05:214,21,0
chr10	11657554	.	GTAA	G	10908.83	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=18.591;DP=520;FS=3.344;HRun=0;HaplotypeScore=141.7775;InbreedingCoeff=0.9968;MQ=92.99;MQ0=0;MQRankSum=-18.401;QD=36.12;ReadPosRankSum=2.235;VQSLOD=5.8579;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,19:20:42.12:536,42,0	1/1:0,8:8:24.08:308,24,0	0/0:28,0:28:81.28:0,81,1919	0/0:30,0:30:84.29:0,84,1941	1/1:0,19:19:42.14:533,42,0	0/0:17,0:17:51.18:0,51,1257	0/0:27,0:27:81.28:0,81,1997	1/1:0,18:18:54.18:740,54,0	1/1:1,22:23:69.23:915,69,0	1/1:0,13:13:39.07:504,39,0	1/1:0,10:10:30.10:391,30,0	0/0:24,0:24:69.24:0,69,1699	0/0:22,0:22:63.20:0,63,1481	0/0:22,0:22:66.23:0,66,1627	1/1:0,21:21:63.21:829,63,0	1/1:0,24:24:72.23:941,72,0	1/1:2,17:19:51.16:667,51,0	1/1:1,12:13:39.13:529,39,0	1/1:1,10:11:30.07:402,30,0	1/1:2,13:15:39.12:492,39,0	1/1:0,10:10:21.07:274,21,0	0/0:20,0:20:60.21:0,60,1449	1/1:0,11:11:27.09:350,27,0	1/1:2,9:11:18.06:236,18,0	0/0:28,0:28:84.27:0,84,2016	1/1:1,18:19:57.19:782,57,0	1/1:0,30:30:90.30:1197,90,0	1/1:0,7:7:21.07:284,21,0
chr10	11661105	.	CT	C	5107.70	PASS	AB=0.755;AC=47;AF=0.839;AN=56;BaseQRankSum=-2.805;DP=448;FS=0.000;HRun=10;HaplotypeScore=98.1866;InbreedingCoeff=0.4162;MQ=56.34;MQ0=16;MQRankSum=-0.340;QD=14.47;ReadPosRankSum=4.738;VQSLOD=4.9999;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:16,6:23:11.65:249,12,0	1/1:5,4:8:16.50:152,17,0	0/0:38,0:11:17.13:0,17,130	0/0:32,0:8:0.07:0,0,37	1/1:5,15:19:36.82:344,37,0	1/1:3,9:12:26.96:228,27,0	1/1:3,3:5:5.99:51,6,0	1/1:17,12:28:37.83:452,38,0	1/1:4,3:7:5.76:93,6,0	1/1:9,15:23:51.95:432,52,0	1/1:16,10:26:40.03:330,40,0	1/1:8,3:11:14.29:127,14,0	1/1:6,4:10:20.04:172,20,0	1/1:2,5:7:17.96:152,18,0	1/1:6,3:9:17.58:136,18,0	0/1:5,3:8:33.35:77,0,33	1/1:9,12:20:23.95:203,24,0	1/1:10,6:13:5.22:125,5,0	1/1:8,9:17:35.98:309,36,0	1/1:10,10:18:44.84:372,45,0	1/1:1,4:5:5.99:52,6,0	1/1:3,5:8:20.37:164,20,0	1/1:3,6:9:13.62:165,14,0	1/1:2,1:3:6:52,6,0	0/0:25,0:25:59.46:0,59,671	1/1:11,13:23:30.37:412,30,0	0/1:11,8:18:9.39:217,0,9	0/1:8,2:10:15.88:42,0,16
chr10	11661115	.	TC	T	2954.69	PASS	AB=0.967;AC=48;AF=0.857;AN=56;BaseQRankSum=2.966;DP=551;FS=8.649;HRun=1;HaplotypeScore=111.0197;InbreedingCoeff=0.1490;MQ=47.82;MQ0=29;MQRankSum=-2.209;QD=5.65;ReadPosRankSum=1.064;VQSLOD=0.0829;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:22:37.44:192,37,0	1/1:12,0:11:15.26:130,15,0	0/1:62,4:13:25.86:26,0,32	0/1:54,6:11:7.59:8,0,37	1/1:27,0:26:48.14:313,48,0	1/1:16,0:16:32.58:175,33,0	1/1:7,0:6:2.76:16,3,0	0/1:32,0:29:31.54:94,0,32	1/1:9,0:9:15.88:72,16,0	1/1:27,0:26:57.68:335,58,0	1/1:25,1:24:37.09:231,37,0	0/1:12,0:11:2.33:49,0,2	1/1:11,0:10:17.41:105,17,0	1/1:9,0:9:18.04:94,18,0	1/1:11,0:11:18.63:107,19,0	0/1:8,0:8:0.87:44,0,1	1/1:23,0:21:31.77:185,32,0	1/1:15,0:12:10.33:58,10,0	0/1:18,1:18:2.29:58,0,2	1/1:25,0:22:11.72:84,12,0	1/1:6,0:6:3.73:11,4,0	1/1:11,0:10:9.18:55,9,0	1/1:10,1:11:13.11:117,13,0	1/1:3,0:3:3.83:20,4,0	0/0:28,0:28:14:0,14,645	1/1:27,1:27:41.97:290,42,0	1/1:18,0:16:11.54:137,12,0	1/1:8,0:8:10.89:79,11,0
chr10	11661116	.	CT	C	2684.77	PASS	AB=0.940;AC=34;AF=0.607;AN=56;BaseQRankSum=2.561;DP=557;FS=11.330;HRun=10;HaplotypeScore=110.5603;InbreedingCoeff=0.4140;MQ=47.37;MQ0=30;MQRankSum=-0.694;QD=7.12;ReadPosRankSum=1.506;VQSLOD=0.9132;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:17,4:21:18.23:194,18,0	1/1:11,1:11:11.16:122,11,0	0/1:70,0:13:7.14:7,0,79	0/0:62,1:11:2.47:0,2,33	1/1:17,10:26:48.50:388,49,0	1/1:6,10:16:37.42:287,37,0	1/1:4,3:6:7.17:42,7,0	0/0:32,0:29:53.22:0,53,439	1/1:8,1:9:5.03:71,5,0	1/1:17,10:26:55.43:409,55,0	1/1:19,6:23:35.12:256,35,0	0/0:12,0:11:22.22:0,22,161	0/1:10,0:10:5.06:5,0,55	0/1:8,1:9:15.27:15,0,33	1/1:8,3:11:12.01:77,12,0	0/1:7,1:8:10.27:70,0,10	1/1:17,6:21:17.61:194,18,0	0/1:14,1:12:14.77:55,0,15	0/1:19,0:18:1.08:1,0,200	0/0:26,0:23:24.11:0,24,255	0/0:6,0:6:5.73:0,6,36	0/0:11,0:10:19.26:0,19,110	1/1:9,2:11:5.06:144,5,0	1/1:2,1:3:2.98:22,3,0	0/0:28,0:28:32.40:0,32,683	1/1:19,7:26:33.19:305,33,0	0/1:13,4:15:0.48:170,0,0	0/1:8,0:8:1.94:33,0,2
chr10	11661128	.	C	CTT	2542.90	PASS	AB=0.930;AC=32;AF=0.571;AN=56;BaseQRankSum=-1.049;DP=589;FS=19.493;HRun=13;HaplotypeScore=124.4693;InbreedingCoeff=0.1863;MQ=38.28;MQ0=39;MQRankSum=0.609;QD=7.37;ReadPosRankSum=0.125;VQSLOD=0.1283;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:19,0:21:7.61:32,0,8	0/0:10,0:9:5.72:0,6,46	0/0:85,0:10:4.39:0,4,60	0/0:74,0:9:13.76:0,14,84	0/1:30,0:31:3.78:4,0,37	1/1:8,7:17:28.83:324,29,0	1/1:4,3:5:6.02:70,6,0	1/1:26,6:31:39.10:378,39,0	0/0:8,0:8:1.80:0,2,22	0/0:26,0:26:0.87:0,1,26	0/1:23,0:22:10.44:53,0,10	0/1:11,3:13:23.89:240,0,24	1/1:9,2:11:21.04:229,21,0	1/1:4,4:9:15.01:169,15,0	0/0:8,0:9:4.96:0,5,20	0/1:9,0:9:7.39:7,0,15	0/1:22,0:20:8.86:9,0,13	0/1:13,0:10:5.79:6,0,28	1/1:15,6:21:30.40:371,30,0	1/1:13,13:24:27.46:390,27,0	1/1:4,2:6:3.01:41,3,0	1/1:5,4:9:23.56:281,24,0	1/1:12,0:12:1.55:22,2,0	1/1:3,0:3:3.11:9,3,0	0/0:28,0:28:50.05:0,50,378	0/1:24,0:23:31.88:68,0,32	0/1:17,0:15:4.23:4,0,16	0/1:4,0:7:4.95:5,0,9
chr10	11661150	.	CT	C	1609.35	PASS	AB=0.778;AC=29;AF=0.518;AN=56;BaseQRankSum=-4.320;DP=454;FS=31.341;HRun=11;HaplotypeScore=91.8868;InbreedingCoeff=-0.1155;MQ=32.18;MQ0=23;MQRankSum=-1.543;QD=5.17;ReadPosRankSum=0.340;VQSLOD=-0.0935;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:11,11:22:4.87:124,0,5	0/1:7,4:10:12.36:58,0,12	0/0:49,0:5:0.47:0,0,1	0/0:57,1:5:3:0,3,32	0/1:21,3:23:24.07:24,0,57	1/1:6,8:14:8.77:135,9,0	0/1:6,1:6:1.90:37,0,2	1/1:14,9:22:4.59:194,5,0	0/1:5,2:6:9.99:40,0,10	0/1:18,5:22:45.96:46,0,67	0/1:10,4:13:21.64:76,0,22	1/1:11,3:12:8.06:72,8,0	1/1:5,6:10:1.07:57,1,0	0/0:6,0:6:2.69:0,3,7	0/1:7,1:8:11.58:16,0,12	0/1:5,5:10:18.42:100,0,18	0/1:17,1:16:24.70:35,0,25	1/1:7,6:10:14.96:122,15,0	1/1:9,7:15:7.50:134,7,0	1/1:10,14:20:5.47:161,5,0	0/0:3,0:3:0:0,0,0	1/1:7,3:9:11.77:96,12,0	0/1:4,4:8:15.89:37,0,16	0/0:3,0:3:1.55:0,2,4	0/0:19,0:19:32.91:0,33,277	0/1:13,8:20:37.38:138,0,37	0/1:7,6:11:10.30:58,0,10	0/0:5,0:5:5.88:0,6,36
chr10	11661605	.	A	AAGCATTCTTG	52859.26	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-8.214;DP=753;FS=2.959;HRun=0;HaplotypeScore=192.3256;InbreedingCoeff=0.9941;MQ=81.86;MQ0=0;MQRankSum=-18.666;QD=102.84;ReadPosRankSum=-3.890;VQSLOD=4.2083;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,24:36:84.22:3661,84,0	1/1:0,10:12:30.10:1563,30,0	0/0:31,0:31:84.25:0,84,2274	0/0:26,0:26:75.20:0,75,2121	1/1:3,27:33:81.14:3031,81,0	0/0:33,0:33:96.32:0,96,3004	0/0:18,0:18:51.16:0,51,1540	1/1:15,14:58:99:6673,159,0	1/1:7,11:27:54.19:2593,54,0	1/1:4,21:34:89.93:4283,90,0	1/1:8,13:24:54.18:2282,54,0	0/0:22,0:22:66.23:0,66,2176	0/0:28,0:28:81.25:0,81,2521	0/0:27,0:27:75.26:0,75,2473	1/1:4,16:28:54.19:2570,54,0	1/1:8,32:48:99:5866,114,0	1/1:1,8:16:21.07:948,21,0	1/1:2,9:11:30.10:1557,30,0	1/1:8,6:22:66.18:2452,66,0	1/1:1,14:24:51.11:2322,51,0	1/1:7,9:29:42.14:1604,42,0	0/0:32,0:32:90.31:0,90,2951	1/1:3,10:21:33.11:1397,33,0	1/1:1,9:17:14.81:533,15,0	0/0:22,0:22:66.21:0,66,1930	1/1:4,20:27:72.23:3668,72,0	1/1:19,21:40:99:5063,111,0	1/1:3,4:7:15.05:793,15,0
chr10	11663512	.	AT	A	910.43	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-3.362;DP=331;FS=13.301;HRun=1;HaplotypeScore=52.3323;InbreedingCoeff=0.8599;MQ=74.65;MQ0=1;MQRankSum=-1.180;QD=25.29;ReadPosRankSum=0.965;VQSLOD=2.1585;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:45.10:0,45,525	0/0:2,0:2:6.01:0,6,62	0/0:12,1:10:9.42:0,9,244	0/0:12,0:8:13.98:0,14,157	0/0:16,0:16:48.11:0,48,555	0/0:14,0:14:42.12:0,42,517	0/0:5,0:5:15.01:0,15,153	0/0:35,0:35:99:0,102,1102	0/0:5,0:5:15.01:0,15,158	0/0:20,0:20:60.14:0,60,674	0/0:11,0:11:33.06:0,33,365	1/1:0,13:13:33.11:453,33,0	1/1:1,15:16:28.79:399,29,0	1/1:0,4:4:6.02:83,6,0	0/0:9,0:9:27.08:0,27,326	0/0:5,0:5:15.03:0,15,172	0/0:21,0:21:55.39:0,55,629	0/0:21,0:21:63.02:0,63,680	0/0:18,0:18:54.10:0,54,583	0/0:10,0:10:30.06:0,30,329	0/0:6,0:6:18.02:0,18,188	1/1:0,3:3:9.03:123,9,0	0/0:5,0:5:15.02:0,15,158	0/0:2,0:2:6.02:0,6,74	0/0:10,0:10:30.10:0,30,399	0/0:15,0:15:45.12:0,45,523	0/0:13,0:13:39.02:0,39,400	0/0:11,0:11:33.04:0,33,365
chr10	11666944	.	TTCTG	T	5254.59	PASS	AB=0.532;AC=29;AF=0.580;AN=50;BaseQRankSum=9.052;DP=455;FS=0.000;HRun=0;HaplotypeScore=41.4310;InbreedingCoeff=0.8086;MQ=27.38;MQ0=145;MQRankSum=-2.232;QD=24.67;ReadPosRankSum=3.106;VQSLOD=4.0441;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,8:7:15.05:285,15,0	1/1:0,5:3:6.02:114,6,0	./.	./.	1/1:1,17:13:30.10:569,30,0	0/0:24,0:13:24.08:0,24,589	./.	0/0:71,0:9:27.09:0,27,716	1/1:3,10:3:6.02:114,6,0	1/1:3,12:7:18.06:342,18,0	1/1:0,11:7:18.06:341,18,0	0/0:14,0:5:9.03:0,9,230	0/0:23,0:12:15.05:0,15,404	0/0:21,0:11:18.06:0,18,469	1/1:2,19:8:24.08:455,24,0	1/1:3,12:9:15.05:285,15,0	1/1:4,17:11:27.09:512,27,0	1/1:2,4:3:6.02:114,6,0	0/0:14,0:2:6.02:0,6,162	0/0:18,0:11:27.09:0,27,704	0/0:8,0:7:15.05:0,15,392	0/0:6,0:4:12.04:0,12,296	1/1:0,10:7:21.07:398,21,0	1/1:2,2:3:6.02:114,6,0	0/0:19,0:18:42.14:0,42,1115	1/1:1,17:11:33.11:626,33,0	0/1:4,29:20:14.83:645,0,15	1/1:1,11:7:18.06:342,18,0
chr10	11668723	.	A	AC	4499.01	PASS	AB=0.556;AC=47;AF=0.870;AN=54;BaseQRankSum=2.214;DP=352;FS=4.316;HRun=1;HaplotypeScore=67.3923;InbreedingCoeff=0.6881;MQ=53.67;MQ0=11;MQRankSum=-2.755;QD=14.95;ReadPosRankSum=-1.890;VQSLOD=3.8051;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:24:59.37:444,59,0	1/1:10,0:9:20.76:157,21,0	0/0:10,0:9:23.54:0,24,225	0/0:7,0:4:8.92:0,9,68	1/1:13,0:12:26.70:209,27,0	1/1:10,0:10:6.01:57,6,0	1/1:10,0:10:3.58:53,4,0	1/1:22,0:19:20.86:323,21,0	1/1:11,0:8:14.47:164,14,0	1/1:13,0:13:32.41:251,32,0	1/1:11,0:11:25.68:169,26,0	0/1:2,8:10:13.86:38,0,14	1/1:11,0:10:20.87:168,21,0	1/1:7,0:6:14.83:106,15,0	1/1:11,1:12:35.35:284,35,0	1/1:7,0:6:17.83:131,18,0	1/1:16,0:13:35.02:248,35,0	1/1:8,0:7:11.90:86,12,0	1/1:14,0:14:38.06:300,38,0	1/1:19,0:19:38.24:250,38,0	1/1:4,0:4:11.88:85,12,0	1/1:12,0:10:28.58:206,29,0	1/1:10,1:11:14.76:135,15,0	1/1:5,0:4:4.90:23,5,0	0/0:26,0:26:72.16:0,72,852	1/1:4,17:21:43.44:309,43,0	1/1:14,1:14:35.76:304,36,0	./.
chr10	11668724	.	C	CCTTTTTTT	14919.24	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=2.453;DP=484;FS=9.509;HRun=0;HaplotypeScore=151.9224;InbreedingCoeff=0.8816;MQ=46.87;MQ0=11;MQRankSum=-4.740;QD=33.98;ReadPosRankSum=-4.468;VQSLOD=3.0274;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:34,0:29:75.54:1094,76,0	1/1:13,0:11:25.49:341,25,0	0/0:8,0:8:23.86:0,24,368	0/0:7,0:4:8.91:0,9,64	1/1:22,0:17:41.83:501,42,0	1/1:10,5:20:32.96:670,33,0	1/1:5,1:15:24.08:687,24,0	1/1:31,0:27:74.41:1280,74,0	1/1:14,0:11:27.06:448,27,0	1/1:24,0:23:66.21:1408,66,0	1/1:19,0:16:44.03:615,44,0	1/1:12,0:11:9.03:192,9,0	1/1:17,0:15:32.64:452,33,0	1/1:13,0:12:35.27:591,35,0	1/1:14,0:14:42:612,42,0	1/1:18,0:17:45.07:878,45,0	1/1:20,0:16:38.88:488,39,0	1/1:11,0:9:16.21:165,16,0	1/1:19,0:19:52.37:853,52,0	1/1:10,0:29:68.41:977,68,0	1/1:7,0:7:19.72:187,20,0	1/1:17,0:14:42.01:580,42,0	1/1:14,0:13:20.86:310,21,0	1/1:5,0:4:11.99:135,12,0	0/0:27,0:29:55.21:0,55,1686	1/1:21,0:21:49.03:673,49,0	1/1:20,0:18:45.11:717,45,0	1/1:10,0:4:3.01:66,3,0
chr10	11669047	.	A	ATCCTCC	3744.12	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-7.008;DP=632;FS=3.686;HRun=0;HaplotypeScore=165.4473;InbreedingCoeff=0.9465;MQ=61.63;MQ0=6;MQRankSum=-9.377;QD=33.13;ReadPosRankSum=-3.130;VQSLOD=3.0724;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:63.22:0,63,1125	0/0:4,0:4:3:0,3,51	0/0:27,0:20:32.32:0,32,574	0/0:21,0:17:21.01:0,21,292	0/0:20,0:19:15.05:0,15,255	1/1:5,11:20:24.04:612,24,0	1/1:8,13:20:21.07:652,21,0	0/0:23,0:23:38.23:0,38,316	0/0:25,0:25:54.18:0,54,944	0/0:31,0:31:69.20:0,69,1181	0/0:17,0:17:27.09:0,27,445	1/1:8,11:19:15.05:479,15,0	1/1:13,10:22:42.14:1315,42,0	1/1:9,10:19:15.05:420,15,0	0/0:31,0:31:54.18:0,54,946	0/0:26,0:26:54.13:0,54,912	0/0:28,0:28:54.18:0,54,979	0/0:21,0:21:42.12:0,42,696	0/0:19,0:19:24.08:0,24,500	0/0:22,0:22:54.02:0,54,815	0/0:28,0:30:36.28:0,36,921	1/1:4,3:7:11.97:267,12,0	0/0:22,0:21:33.07:0,33,527	0/0:24,0:24:44.18:0,44,734	0/0:27,0:27:63.22:0,63,1325	0/0:30,0:30:57.16:0,57,1034	0/0:21,0:21:45.15:0,45,747	0/0:15,0:15:33.09:0,33,548
chr10	11669067	.	CCCTT	C	9278.98	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-1.861;DP=636;FS=5.369;HRun=0;HaplotypeScore=113.2722;InbreedingCoeff=0.9258;MQ=55.78;MQ0=6;MQRankSum=1.993;QD=26.36;ReadPosRankSum=7.227;VQSLOD=4.1327;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,28:35:54.18:904,54,0	1/1:0,5:5:3.01:50,3,0	0/0:30,0:18:27.83:0,28,519	0/0:22,0:16:27.56:0,28,551	1/1:3,17:19:21.07:350,21,0	0/0:20,0:20:33.03:0,33,614	0/0:20,0:20:39.09:0,39,772	0/0:18,0:18:0.77:0,1,204	1/1:6,19:25:36.12:602,36,0	1/1:5,27:32:84.27:1337,84,0	1/1:7,15:22:27.09:439,27,0	0/0:27,0:26:39.08:0,39,760	0/0:21,0:21:60.20:0,60,1265	0/0:14,0:14:9:0,9,261	1/1:3,26:29:44.87:755,45,0	1/1:2,24:26:48.16:806,48,0	1/1:5,27:32:39.13:655,39,0	1/1:4,15:19:33.11:553,33,0	0/0:16,0:16:16.79:0,17,481	0/0:25,0:25:56.81:0,57,885	0/0:33,0:33:13.28:0,13,805	0/0:9,0:8:17.49:0,17,431	1/1:4,19:22:26.27:452,26,0	1/1:5,20:25:36.12:604,36,0	0/0:25,0:25:63.22:0,63,1413	1/1:5,18:23:51.16:818,51,0	1/1:3,19:22:42.14:703,42,0	1/1:8,6:14:15.05:252,15,0
chr10	11669162	.	GTCCGTCCT	G	5052.96	PASS	AB=1.000;AC=27;AF=0.540;AN=50;BaseQRankSum=-1.124;DP=425;FS=10.984;HRun=0;HaplotypeScore=103.3968;InbreedingCoeff=0.7710;MQ=51.56;MQ0=6;MQRankSum=-2.821;QD=22.07;ReadPosRankSum=-1.771;VQSLOD=3.1740;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:20,5:24:56.81:836,57,0	./.	0/0:22,0:11:7.17:0,7,584	0/0:27,0:17:16.47:0,16,463	1/1:11,3:14:14.92:138,15,0	0/0:14,0:14:32.91:0,33,671	0/0:20,0:19:27.05:0,27,860	0/1:16,0:15:3.66:4,0,240	1/1:0,13:13:11.91:143,12,0	1/1:2,11:13:26.44:410,26,0	1/1:20,1:20:11.99:131,12,0	0/0:21,0:21:57.06:0,57,1518	0/0:9,0:9:27.09:0,27,794	0/0:21,0:19:51.15:0,51,1324	1/1:1,9:10:8.90:60,9,0	1/1:13,5:17:26.63:329,27,0	1/1:19,1:20:20.82:429,21,0	1/1:13,3:16:42.12:1048,42,0	0/1:16,0:12:7.98:8,0,347	0/0:12,0:12:23.06:0,23,545	0/0:22,0:22:34.13:0,34,1382	0/1:7,0:7:5.94:6,0,322	./.	1/1:16,4:20:20.77:525,21,0	0/0:17,0:17:47.88:0,48,1084	1/1:1,10:10:27.08:689,27,0	1/1:9,0:8:18.01:297,18,0	./.
chr10	11671052	.	TA	T	11894.69	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=3.186;DP=566;FS=0.000;HRun=8;HaplotypeScore=58.4479;InbreedingCoeff=0.9420;MQ=75.77;MQ0=0;MQRankSum=-2.349;QD=23.19;ReadPosRankSum=3.303;VQSLOD=5.3323;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,31:33:69.11:665,69,0	1/1:0,5:5:9.01:87,9,0	0/0:13,0:13:11.14:0,11,136	0/0:12,0:12:17.99:0,18,181	1/1:3,29:32:84.07:799,84,0	1/1:1,19:20:54.09:521,54,0	1/1:1,10:11:29.26:266,29,0	1/1:4,24:28:72.05:672,72,0	1/1:0,18:18:48.08:463,48,0	1/1:5,24:29:74.94:705,75,0	1/1:1,26:27:71.98:673,72,0	1/1:3,16:19:42.06:405,42,0	1/1:3,20:23:48.07:463,48,0	1/1:2,16:18:42.06:405,42,0	1/1:0,24:24:63.10:608,63,0	1/1:1,13:14:33.05:318,33,0	1/1:5,25:30:66.05:626,66,0	1/1:3,9:12:24.03:227,24,0	1/1:2,12:14:36.02:334,36,0	1/1:1,24:25:69.11:666,69,0	1/1:3,16:19:39.06:376,39,0	1/1:2,24:27:62.05:572,62,0	1/1:3,14:17:39.06:376,39,0	1/1:1,11:12:30.05:289,30,0	0/0:27,0:27:78.21:0,78,916	1/1:4,24:28:72.07:686,72,0	1/1:4,21:25:63.10:608,63,0	1/1:0,3:3:9.01:87,9,0
chr10	11671357	.	T	TGA	126.37	PASS	AB=0.714;AC=1;AF=0.018;AN=56;BaseQRankSum=2.807;DP=540;FS=5.129;HRun=0;HaplotypeScore=60.9017;InbreedingCoeff=-0.0193;MQ=60.85;MQ0=4;MQRankSum=-3.160;QD=12.64;ReadPosRankSum=-3.020;VQSLOD=2.4067;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,135,2183	0/0:4,0:4:12.04:0,12,196	0/0:22,0:13:39.10:0,39,551	0/0:26,0:21:53.86:0,54,845	0/0:26,0:26:75.24:0,75,1193	0/0:18,0:18:54.18:0,54,869	0/0:19,0:19:57.19:0,57,930	0/0:31,0:30:90.30:0,90,1442	0/0:13,0:13:39.10:0,39,586	0/0:12,0:12:36.12:0,36,588	0/0:20,0:20:57.19:0,57,930	0/0:18,0:18:54.16:0,54,852	0/0:13,0:13:36.10:0,36,558	0/0:14,0:14:39.13:0,39,634	0/0:19,0:19:57.19:0,57,926	0/0:16,0:16:48.15:0,48,757	0/0:28,0:28:78.17:0,78,1196	0/0:18,0:18:54.18:0,54,853	0/0:18,0:18:48.16:0,48,757	0/0:19,0:19:57.19:0,57,927	0/0:28,0:28:78.24:0,78,1245	0/0:16,0:16:45.15:0,45,734	0/0:17,0:17:45.14:0,45,710	0/0:16,0:16:45.12:0,45,674	0/0:12,0:12:36.12:0,36,587	0/0:25,0:25:72.23:0,72,1126	0/0:17,0:16:51.17:0,51,824	0/1:6,4:10:99:201,0,217
chr10	11671485	.	T	TA	4148.39	PASS	AB=1.000;AC=49;AF=0.907;AN=54;BaseQRankSum=3.136;DP=272;FS=6.649;HRun=1;HaplotypeScore=74.7534;InbreedingCoeff=0.5384;MQ=77.89;MQ0=0;MQRankSum=-1.192;QD=17.00;ReadPosRankSum=2.093;VQSLOD=3.8159;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,10:21:23.24:340,23,0	1/1:2,2:4:9:84,9,0	0/1:10,0:8:23.91:24,0,129	0/0:16,0:12:7.68:0,8,210	1/1:8,6:14:17.88:197,18,0	1/1:6,11:17:39.27:304,39,0	1/1:3,0:3:1.83:4,2,0	1/1:25,11:36:32.13:384,32,0	1/1:2,3:5:12.49:116,12,0	1/1:2,7:9:17.05:238,17,0	1/1:2,7:9:21.03:207,21,0	1/1:4,3:7:7.41:56,7,0	1/1:1,5:6:18:162,18,0	1/1:1,3:4:12.02:119,12,0	1/1:4,3:7:18.49:171,18,0	1/1:1,7:8:23.07:212,23,0	1/1:4,7:11:25.83:236,26,0	1/1:4,13:18:32.22:374,32,0	1/1:3,7:10:7.64:168,8,0	1/1:6,0:6:0.08:1,0,0	1/1:2,0:2:0.47:1,0,0	1/1:0,2:2:6.01:60,6,0	1/1:1,2:3:6.01:60,6,0	./.	0/0:12,0:12:33.07:0,33,418	1/1:7,6:13:28.90:266,29,0	1/1:6,9:15:30.15:279,30,0	1/1:1,3:4:5.84:84,6,0
chr10	11671486	.	T	TA	2219.98	PASS	AB=0.703;AC=36;AF=0.643;AN=56;BaseQRankSum=8.610;DP=271;FS=3.078;HRun=0;HaplotypeScore=76.5993;InbreedingCoeff=0.0526;MQ=78.08;MQ0=0;MQRankSum=-2.590;QD=9.49;ReadPosRankSum=7.277;VQSLOD=3.4122;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:8,10:18:36.99:168,0,37	1/1:3,2:5:6.02:58,6,0	0/1:10,0:8:16.26:16,0,152	0/0:16,0:12:26.58:0,27,259	0/1:9,6:15:23.30:122,0,23	1/1:6,1:17:10.59:146,11,0	1/1:3,0:3:3.18:35,3,0	0/1:24,1:35:99:165,0,159	0/1:1,3:4:2.15:57,0,2	1/1:2,7:9:4.43:154,4,0	1/1:1,7:8:15.52:95,16,0	1/1:4,3:7:14.81:100,15,0	1/1:1,5:6:14.79:101,15,0	1/1:1,3:4:11.95:91,12,0	0/1:4,3:7:9.17:76,0,9	1/1:1,7:8:10.36:144,10,0	1/1:4,7:11:4.17:110,4,0	0/1:4,13:17:11:213,0,11	0/1:3,1:10:23.57:107,0,24	0/0:7,0:7:14.13:0,14,70	0/0:2,0:2:2.88:0,3,15	1/1:0,2:2:5.98:46,6,0	1/1:1,2:3:5.97:46,6,0	0/1:2,0:2:0:0,0,0	0/0:12,0:12:36.10:0,36,459	0/1:8,6:14:1.95:135,0,2	0/1:6,9:15:16.08:163,0,16	0/1:1,3:4:4.11:35,0,4
chr10	11672838	.	C	CA	9032.56	PASS	AB=1.000;AC=51;AF=0.911;AN=56;BaseQRankSum=3.375;DP=638;FS=3.396;HRun=10;HaplotypeScore=118.9647;InbreedingCoeff=0.6900;MQ=70.83;MQ0=2;MQRankSum=-3.759;QD=15.39;ReadPosRankSum=1.185;VQSLOD=4.5728;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,22:31:62.98:643,63,0	1/1:1,12:13:29.67:320,30,0	0/1:37,0:28:22.99:23,0,230	0/0:21,0:11:5.55:0,6,35	1/1:5,24:31:68.72:661,69,0	1/1:20,0:21:36.93:182,37,0	1/1:13,0:13:18.50:94,18,0	1/1:31,0:31:66.95:373,67,0	1/1:3,17:21:44.94:458,45,0	1/1:8,18:26:51.08:526,51,0	1/1:3,18:22:31.59:478,32,0	1/1:21,0:21:36.93:181,37,0	1/1:13,0:13:25.57:126,26,0	1/1:17,0:17:22.26:105,22,0	1/1:5,19:24:51.13:542,51,0	1/1:4,18:21:39.10:416,39,0	1/1:4,14:18:32.98:337,33,0	1/1:7,13:20:14.97:365,15,0	1/1:24,0:24:51.19:263,51,0	1/1:31,0:31:44.83:258,45,0	1/1:26,0:26:40.40:216,40,0	1/1:7,0:7:11.02:51,11,0	1/1:0,20:21:47.99:493,48,0	1/1:2,21:23:51.13:544,51,0	0/0:30,0:30:83.90:0,84,690	1/1:7,24:32:71.78:705,72,0	1/1:11,23:35:16.38:559,16,0	1/1:1,3:5:13.68:115,14,0
chr10	11672848	.	A	AC	5536.91	PASS	AB=1.000;AC=40;AF=0.714;AN=56;BaseQRankSum=5.133;DP=650;FS=10.776;HRun=1;HaplotypeScore=126.4043;InbreedingCoeff=-0.0018;MQ=68.41;MQ0=3;MQRankSum=-1.909;QD=9.60;ReadPosRankSum=7.504;VQSLOD=1.3899;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:29:48.98:93,0,49	0/1:14,0:14:21.64:39,0,22	0/0:38,0:30:19.36:0,19,458	0/1:23,0:12:1.47:1,0,84	0/1:31,0:31:62.42:102,0,62	1/1:1,1:19:37.38:278,37,0	1/1:1,0:18:21.47:168,21,0	1/1:0,32:33:92.98:1073,93,0	0/1:20,0:20:14.12:83,0,14	0/1:26,0:26:33.97:34,0,116	0/1:25,0:25:80.81:81,0,104	1/1:0,0:26:37.63:272,38,0	1/1:1,0:23:26.83:199,27,0	1/1:0,0:16:23.82:174,24,0	1/1:20,0:20:12.40:96,12,0	0/1:20,0:19:37.25:56,0,37	1/1:16,0:16:0.15:47,0,0	0/1:18,0:18:59.17:59,0,60	1/1:0,24:24:70.33:816,70,0	1/1:1,31:33:80.49:848,80,0	1/1:0,25:26:42.14:572,42,0	1/1:0,0:9:17.58:114,18,0	1/1:22,0:22:7.50:105,8,0	1/1:21,0:21:13.34:90,13,0	0/0:34,0:34:96.27:0,96,1175	0/1:27,0:27:36.51:50,0,37	0/1:33,0:32:84.89:85,0,126	0/1:5,0:5:3.79:4,0,20
chr10	11677047	.	AT	A	6794.96	PASS	AB=1.000;AC=51;AF=0.911;AN=56;BaseQRankSum=1.314;DP=380;FS=4.459;HRun=10;HaplotypeScore=42.4478;InbreedingCoeff=0.6098;MQ=75.01;MQ0=1;MQRankSum=-2.441;QD=19.03;ReadPosRankSum=1.603;VQSLOD=5.4970;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,23:26:32.69:498,33,0	1/1:1,6:7:11.99:104,12,0	0/1:20,0:15:9.31:9,0,123	0/0:11,0:7:3.99:0,4,50	1/1:2,19:21:53.98:469,54,0	1/1:2,8:10:20.99:182,21,0	1/1:1,7:8:15:130,15,0	1/1:5,22:27:65.95:568,66,0	1/1:0,7:7:18:156,18,0	1/1:4,10:14:29.95:252,30,0	1/1:1,20:21:56.88:485,57,0	1/1:1,7:8:20.99:182,21,0	1/1:0,6:6:18:156,18,0	1/1:1,2:3:6:52,6,0	1/1:2,11:13:29.99:260,30,0	1/1:2,6:8:14.99:130,15,0	1/1:4,30:34:68.98:599,69,0	1/1:1,13:14:38.99:338,39,0	1/1:4,15:19:41.92:357,42,0	1/1:4,15:19:38.90:330,39,0	1/1:1,5:6:12:104,12,0	1/1:0,7:7:21:182,21,0	1/1:0,10:10:26.99:234,27,0	1/1:1,6:7:17.99:156,18,0	0/0:12,0:12:36.10:0,36,398	1/1:2,18:20:53.99:469,54,0	1/1:1,17:18:41.99:365,42,0	1/1:3,1:4:3:26,3,0
chr10	11677465	.	TCTC	T	797.94	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.715;DP=599;FS=5.200;HRun=0;HaplotypeScore=80.3463;InbreedingCoeff=0.9956;MQ=85.86;MQ0=0;MQRankSum=-2.664;QD=44.33;ReadPosRankSum=1.748;VQSLOD=5.4276;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:75.26:0,75,1820	0/0:7,0:7:21.07:0,21,509	0/0:19,0:20:57.18:0,57,1218	0/0:19,0:19:54.12:0,54,1071	0/0:30,0:30:84.23:0,84,2010	0/0:19,0:19:54.19:0,54,1330	0/0:18,0:18:54.17:0,54,1282	0/0:30,0:30:87.27:0,87,1977	0/0:22,0:22:66.23:0,66,1570	0/0:18,0:18:54.19:0,54,1311	0/0:18,0:18:51.16:0,51,1206	0/0:27,0:27:81.28:0,81,1951	0/0:14,0:14:42.14:0,42,1020	0/0:17,0:17:51.18:0,51,1250	0/0:21,0:21:63.16:0,63,1402	0/0:21,0:21:63.22:0,63,1528	0/0:31,0:31:93.30:0,93,2241	0/0:14,0:14:42.13:0,42,984	0/0:21,0:21:63.19:0,63,1517	0/0:18,0:18:54.17:0,54,1255	0/0:36,0:36:99:0,108,2508	0/0:11,0:11:33.10:0,33,763	0/0:17,0:17:48.14:0,48,1103	0/0:30,0:30:87.28:0,87,2067	1/1:0,18:18:48.16:893,48,0	0/0:36,0:36:99:0,105,2584	0/0:25,0:25:75.26:0,75,1821	0/0:15,0:15:45.15:0,45,1087
chr10	11677721	.	A	AT	742.77	PASS	AB=0.955;AC=5;AF=0.089;AN=56;BaseQRankSum=-6.375;DP=607;FS=1.423;HRun=10;HaplotypeScore=64.0965;InbreedingCoeff=0.8244;MQ=75.18;MQ0=1;MQRankSum=0.260;QD=13.03;ReadPosRankSum=0.819;VQSLOD=3.5829;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:73.28:0,73,732	0/0:10,0:10:23.97:0,24,197	0/0:9,0:8:8.97:0,9,71	0/1:20,1:20:1.61:2,0,140	0/0:24,0:24:56.88:0,57,465	1/1:2,16:18:45.11:480,45,0	1/1:4,14:18:36.09:384,36,0	0/0:29,0:30:73.83:0,74,580	0/0:17,0:17:47.95:0,48,394	0/0:30,0:30:71.89:0,72,591	0/0:24,0:24:48.71:0,49,387	0/0:23,0:23:53.90:0,54,443	0/0:19,0:19:44.92:0,45,367	0/0:18,0:18:47.93:0,48,394	0/0:23,0:23:56.88:0,57,462	0/0:25,1:26:34.37:0,34,483	0/0:24,0:24:68.86:0,69,557	0/0:14,0:16:37.02:0,37,283	0/0:15,1:16:12.92:0,13,305	0/0:28,1:29:33.88:0,34,485	0/0:13,0:13:35.95:0,36,293	0/0:21,0:21:34.44:0,34,421	0/0:20,1:21:21.93:0,22,384	0/0:15,0:17:43.01:0,43,332	0/0:22,0:22:41.85:0,42,334	0/0:29,0:30:70.83:0,71,565	0/0:31,0:30:80.83:0,81,655	0/0:16,0:16:35.94:0,36,295
chr10	11681923	.	C	CT	586.55	PASS	AB=0.877;AC=10;AF=0.179;AN=56;BaseQRankSum=-3.809;DP=557;FS=0.000;HRun=12;HaplotypeScore=62.8036;InbreedingCoeff=0.3676;MQ=69.44;MQ0=1;MQRankSum=0.208;QD=5.99;ReadPosRankSum=-0.497;VQSLOD=1.6216;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:59.62:0,60,437	0/1:5,1:6:14.28:14,0,73	1/1:14,1:11:5.14:54,5,0	0/1:10,0:9:5.52:6,0,51	0/0:21,1:24:16.08:0,16,346	1/1:3,17:21:26:401,26,0	1/1:1,9:11:1.34:206,1,0	0/0:42,0:43:30.06:0,30,494	0/0:17,0:19:43.74:0,44,308	0/0:23,2:26:14.51:0,15,259	0/0:22,1:24:29.50:0,30,369	0/0:30,0:30:48.83:0,49,422	0/1:9,3:14:30.46:30,0,113	0/0:23,0:25:36.03:0,36,407	0/0:23,0:26:49.38:0,49,426	0/0:16,0:16:41.74:0,42,306	0/0:16,0:17:46.76:0,47,332	0/0:13,1:14:3.58:0,4,187	0/0:20,0:23:40.38:0,40,344	0/0:15,0:16:25.83:0,26,179	0/1:17,2:20:17.57:18,0,206	0/0:19,0:19:44.59:0,45,321	0/0:17,1:18:5.78:0,6,196	0/0:3,0:4:7.96:0,8,47	0/0:29,2:31:48.33:0,48,516	0/0:24,0:24:24.49:0,24,343	0/0:20,0:21:49.50:0,49,343	0/0:16,0:16:29.76:0,30,219
chr10	11682400	.	T	TA	8338.52	PASS	AB=0.950;AC=31;AF=0.554;AN=56;BaseQRankSum=-12.606;DP=554;FS=16.773;HRun=9;HaplotypeScore=57.2184;InbreedingCoeff=0.8952;MQ=65.67;MQ0=1;MQRankSum=2.181;QD=24.53;ReadPosRankSum=3.060;VQSLOD=3.9080;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,25:27:63.17:697,63,0	1/1:3,5:8:15.04:166,15,0	0/0:20,0:17:26.90:0,27,190	0/1:18,0:13:42.12:42,0,124	1/1:3,24:27:5.40:673,5,0	0/0:25,0:25:62.96:0,63,543	0/0:11,0:11:23.99:0,24,208	0/0:23,0:23:50.98:0,51,443	1/1:7,13:20:7.03:306,7,0	1/1:6,21:28:69.15:751,69,0	1/1:7,22:29:37.07:624,37,0	0/0:20,0:21:56.01:0,56,475	0/0:12,0:12:29.98:0,30,260	0/0:20,0:20:56.94:0,57,488	1/1:2,14:16:42.11:465,42,0	1/1:1,10:11:27.07:298,27,0	1/1:1,21:22:57.15:630,57,0	1/1:2,26:28:75.18:818,75,0	0/0:23,0:22:56.98:0,57,492	0/0:12,0:12:26.99:0,27,234	0/0:6,0:6:18:0,18,156	0/0:21,0:21:53.95:0,54,460	1/1:4,20:24:57.15:629,57,0	1/1:2,13:15:36.10:398,36,0	0/0:20,0:20:56.93:0,57,482	1/1:4,23:27:69.18:755,69,0	1/1:5,26:31:78.20:853,78,0	1/1:1,7:8:21.06:232,21,0
chr10	11683096	.	A	AT	581.96	PASS	AB=0.857;AC=3;AF=0.054;AN=56;BaseQRankSum=-6.679;DP=551;FS=0.715;HRun=10;HaplotypeScore=55.4831;InbreedingCoeff=0.5233;MQ=69.45;MQ0=0;MQRankSum=-0.823;QD=15.31;ReadPosRankSum=0.651;VQSLOD=3.7500;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:29.94:0,30,246	0/0:9,0:10:26:0,26,203	0/0:9,0:9:14.95:0,15,121	0/0:8,0:6:9.29:0,9,62	1/1:10,22:32:63.16:672,63,0	0/0:20,2:22:15.95:0,16,338	0/0:7,0:7:20.95:0,21,168	0/0:35,0:36:77.82:0,78,634	0/0:20,0:20:44.93:0,45,369	0/0:27,1:28:39.89:0,40,532	0/0:18,0:19:52.96:0,53,421	0/0:16,0:16:32.95:0,33,271	0/0:16,0:17:46.98:0,47,375	0/0:21,0:21:50.91:0,51,419	0/0:30,0:30:62.84:0,63,511	0/0:20,1:21:18.93:0,19,362	0/0:17,0:17:44.93:0,45,367	0/0:17,1:18:6.72:0,7,263	0/0:15,0:16:46.97:0,47,372	0/0:26,0:27:67.94:0,68,548	0/1:5,1:6:14:14,0,105	0/0:14,0:14:38.94:0,39,317	0/0:28,0:28:71.86:0,72,585	0/0:16,1:17:3.97:0,4,239	0/0:25,0:25:54.04:0,54,460	0/0:23,0:23:53.90:0,54,443	0/0:27,1:29:47.96:0,48,589	0/0:20,0:20:53.92:0,54,443
chr10	11686551	.	GA	G	21552.61	PASS	AB=0.756;AC=54;AF=0.964;AN=56;BaseQRankSum=-3.426;DP=571;FS=0.000;HRun=1;HaplotypeScore=118.1748;InbreedingCoeff=-0.0391;MQ=63.86;MQ0=0;MQRankSum=-3.303;QD=37.75;ReadPosRankSum=0.980;VQSLOD=4.5067;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,20:20:51.17:712,51,0	1/1:0,8:8:21.07:293,21,0	0/1:5,3:8:74.73:167,0,75	0/1:8,3:11:31.45:184,0,31	1/1:0,27:27:69.19:963,69,0	1/1:1,30:31:87.28:1198,87,0	1/1:0,18:18:48.16:671,48,0	1/1:0,38:38:99:1550,111,0	1/1:0,24:24:69.23:963,69,0	1/1:0,27:27:81.26:1114,81,0	1/1:0,23:23:66.22:922,66,0	1/1:0,20:20:54.18:754,54,0	1/1:0,35:35:93.31:1298,93,0	1/1:0,23:23:66.22:921,66,0	1/1:0,30:30:84.28:1172,84,0	1/1:0,30:30:81.27:1132,81,0	1/1:1,8:9:21.07:288,21,0	1/1:0,11:11:33.11:461,33,0	1/1:0,24:24:72.24:1007,72,0	1/1:1,24:25:66.18:899,66,0	1/1:0,9:9:27.09:377,27,0	1/1:1,21:22:60.20:837,60,0	1/1:0,20:20:51.17:712,51,0	1/1:0,7:7:12.04:168,12,0	1/1:0,15:15:39.13:545,39,0	1/1:0,22:22:66.22:923,66,0	1/1:0,29:29:81.27:1132,81,0	1/1:1,4:5:15.03:191,15,0
chr10	11687621	.	GTCTGTGTC	G	9165.36	PASS	AB=0.870;AC=46;AF=0.821;AN=56;BaseQRankSum=-0.269;DP=535;FS=2.295;HRun=0;HaplotypeScore=174.9910;InbreedingCoeff=0.1476;MQ=48.89;MQ0=14;MQRankSum=-1.151;QD=18.55;ReadPosRankSum=-1.618;VQSLOD=4.3216;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:19:15.86:205,16,0	1/1:6,1:8:5.98:107,6,0	0/0:24,0:5:1.71:0,2,65	0/1:26,0:9:8.90:9,0,155	1/1:2,18:18:9.03:225,9,0	1/1:26,0:31:36.63:490,37,0	0/1:10,0:10:39.75:108,0,40	0/1:19,0:21:12.22:314,0,12	1/1:4,14:20:9.03:227,9,0	1/1:2,12:14:35.99:512,36,0	1/1:9,6:16:26.36:592,26,0	1/1:13,0:15:0.09:160,0,0	0/1:15,1:22:18.08:339,0,18	0/1:14,0:19:7.74:186,0,8	1/1:0,23:25:24.08:618,24,0	1/1:14,7:23:49.90:927,50,0	1/1:23,2:30:64.62:855,65,0	0/1:12,1:14:10.66:285,0,11	1/1:16,0:14:32.88:322,33,0	1/1:18,0:22:15.64:381,16,0	1/1:17,0:17:26.58:282,27,0	1/1:13,0:14:10.83:121,11,0	1/1:13,2:15:17.28:290,17,0	1/1:2,24:26:18.06:475,18,0	0/0:17,0:17:45.15:0,45,1296	1/1:15,1:19:31.32:613,31,0	1/1:0,19:20:18.66:483,19,0	1/1:5,0:4:1.93:40,2,0
chr10	11687627	.	GTC	G	4933.65	PASS	AB=1.000;AC=49;AF=0.875;AN=56;BaseQRankSum=5.478;DP=516;FS=6.018;HRun=0;HaplotypeScore=152.5537;InbreedingCoeff=0.6291;MQ=46.72;MQ0=11;MQRankSum=-1.666;QD=10.82;ReadPosRankSum=2.009;VQSLOD=4.0500;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:21:18.55:155,19,0	1/1:7,0:7:2.95:20,3,0	0/0:19,2:3:9.03:0,9,127	0/0:20,1:9:19.42:0,19,190	1/1:19,0:18:8.94:80,9,0	1/1:24,5:29:48.36:392,48,0	1/1:12,1:12:12.10:125,12,0	0/1:22,0:22:44.16:276,0,44	1/1:17,1:19:8.97:82,9,0	1/1:14,1:14:29.25:252,29,0	1/1:16,0:16:26.76:190,27,0	1/1:13,1:15:8.11:173,8,0	1/1:16,6:22:43.95:339,44,0	1/1:12,5:17:32.95:274,33,0	1/1:24,0:25:23.79:181,24,0	1/1:21,0:21:47.21:388,47,0	1/1:25,1:29:55.05:388,55,0	1/1:13,0:13:13.57:139,14,0	1/1:13,1:11:22.95:181,23,0	1/1:20,3:23:19.48:265,19,0	1/1:16,0:16:22.58:184,23,0	1/1:12,1:13:4.52:41,5,0	1/1:16,0:16:17.57:162,18,0	1/1:27,0:26:17.67:113,18,0	0/0:17,0:17:44.85:0,45,734	1/1:17,0:18:27.70:371,28,0	1/1:19,0:20:17.82:148,18,0	1/1:4,0:3:1.87:17,2,0
chr10	11687633	.	GTC	G	4861.31	PASS	AB=1.000;AC=49;AF=0.875;AN=56;BaseQRankSum=4.859;DP=488;FS=3.602;HRun=0;HaplotypeScore=150.4928;InbreedingCoeff=0.6676;MQ=48.99;MQ0=10;MQRankSum=-2.852;QD=11.20;ReadPosRankSum=2.257;VQSLOD=4.8321;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:22:15.56:133,16,0	1/1:7,0:7:2.95:20,3,0	0/0:20,0:6:18.05:0,18,304	0/0:19,0:9:17.89:0,18,283	1/1:17,0:17:11.94:103,12,0	1/1:27,1:28:45.37:368,45,0	1/1:13,0:12:13.29:147,13,0	0/1:16,0:16:66.40:205,0,66	1/1:18,0:18:9.44:83,9,0	1/1:13,0:12:24.22:212,24,0	1/1:16,0:16:26.51:178,27,0	1/1:14,1:15:8.17:183,8,0	1/1:17,2:19:35.53:269,36,0	1/1:17,1:18:32.95:275,33,0	1/1:26,0:26:26.76:204,27,0	1/1:21,0:20:47.46:384,47,0	1/1:30,0:31:56.04:411,56,0	1/1:11,0:11:8.31:113,8,0	1/1:13,0:10:20.89:177,21,0	1/1:23,1:25:25.47:314,25,0	1/1:13,0:13:23.04:199,23,0	1/1:12,0:12:6.35:50,6,0	1/1:15,0:15:25.75:197,26,0	1/1:23,0:22:17.67:113,18,0	0/0:15,0:15:35.84:0,36,658	1/1:17,0:17:17.45:338,17,0	1/1:19,0:19:17.82:147,18,0	1/1:5,0:4:5.43:38,5,0
chr10	11688610	.	CA	C	12944.51	PASS	AB=0.800;AC=51;AF=0.911;AN=56;BaseQRankSum=2.693;DP=684;FS=14.820;HRun=10;HaplotypeScore=92.4744;InbreedingCoeff=0.7331;MQ=58.93;MQ0=7;MQRankSum=1.065;QD=20.29;ReadPosRankSum=2.884;VQSLOD=4.3166;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,44:50:99:1094,126,0	1/1:1,9:10:20.98:182,21,0	0/1:6,2:6:34.04:34,0,91	0/0:16,0:8:14.53:0,15,142	1/1:2,20:22:50.87:442,51,0	1/1:0,20:20:56.99:495,57,0	1/1:3,19:22:26.79:462,27,0	1/1:7,27:33:71.91:618,72,0	1/1:4,19:23:54.74:490,55,0	1/1:3,18:21:56.01:471,56,0	1/1:3,16:18:5.78:278,6,0	1/1:3,24:27:71.96:625,72,0	1/1:0,19:19:41.99:365,42,0	1/1:2,14:16:41.99:364,42,0	1/1:1,30:30:74.99:651,75,0	1/1:5,21:26:43.10:546,43,0	1/1:1,30:31:83.98:729,84,0	1/1:3,13:16:35.02:292,35,0	1/1:4,22:25:62.98:544,63,0	1/1:2,20:22:32.50:444,33,0	1/1:2,22:24:56.99:495,57,0	1/1:3,22:25:65.99:573,66,0	1/1:5,21:26:53.82:468,54,0	1/1:7,34:39:92.96:807,93,0	0/0:29,1:30:52.11:0,52,790	1/1:9,29:38:86.96:751,87,0	1/1:4,23:27:29.69:488,30,0	1/1:0,10:10:26.99:234,27,0
chr10	11690765	.	A	AGTGTGTGTGT	4837.52	PASS	AB=0.993;AC=35;AF=0.729;AN=48;BaseQRankSum=1.059;DP=549;FS=8.103;HRun=0;HaplotypeScore=173.1541;InbreedingCoeff=0.4424;MQ=60.39;MQ0=9;MQRankSum=-4.635;QD=12.28;ReadPosRankSum=-2.791;VQSLOD=2.8242;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:16,6:23:2.87:58,3,0	1/1:7,2:10:9.03:321,9,0	./.	./.	./.	1/1:25,2:26:11.83:174,12,0	1/1:26,0:25:17.94:381,18,0	0/1:26,0:24:1.98:2,0,20	1/1:12,2:13:1.72:5,2,0	1/1:22,2:25:52.57:1304,53,0	./.	1/1:25,0:25:2.49:96,2,0	1/1:16,0:16:5.17:196,5,0	0/1:12,0:12:31.75:102,0,32	0/1:10,0:10:0:0,0,0	0/1:20,0:20:0:0,0,0	1/1:18,0:17:14.37:345,14,0	1/1:14,0:14:8.99:263,9,0	0/1:20,0:19:0.93:1,0,246	0/0:15,0:15:15.01:0,15,288	0/0:41,0:40:17.49:0,17,371	1/1:9,0:7:3.01:74,3,0	0/1:12,0:11:0:0,0,0	0/1:19,0:20:0.01:0,0,0	0/0:9,0:10:21.07:0,21,564	1/1:24,1:31:59.82:1224,60,0	1/1:21,0:20:6.02:187,6,0	1/1:11,0:12:3.01:103,3,0
chr10	11690805	.	T	TGC	1962.64	PASS	AB=0.611;AC=33;AF=0.589;AN=56;BaseQRankSum=-5.398;DP=503;FS=0.000;HRun=0;HaplotypeScore=122.2154;InbreedingCoeff=0.7432;MQ=51.89;MQ0=9;MQRankSum=-0.078;QD=6.31;ReadPosRankSum=0.437;VQSLOD=2.9351;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:19:23.80:179,24,0	1/1:9,0:10:11.03:69,11,0	0/0:2,0:1:2.22:0,2,7	0/0:12,0:6:5.63:0,6,30	1/1:16,0:16:9.79:64,10,0	0/0:20,0:19:9.51:0,10,88	0/0:31,0:29:32.70:0,33,258	1/1:16,0:14:13.94:79,14,0	1/1:16,0:15:11.67:73,12,0	1/1:27,0:27:38.43:295,38,0	1/1:18,0:18:20.88:161,21,0	0/0:22,0:22:24.60:0,25,172	0/0:18,0:17:23.95:0,24,162	0/0:14,0:14:20.64:0,21,144	0/1:4,2:11:0:0,0,0	0/0:6,0:18:0:0,0,0	1/1:6,0:22:8.87:80,9,0	1/1:13,0:13:26.55:181,27,0	1/1:5,11:15:1.15:245,1,0	1/1:5,11:17:6.49:100,6,0	1/1:14,32:48:15.05:247,15,0	0/0:8,0:6:5.97:0,6,44	1/1:3,0:13:5.33:32,5,0	0/0:11,0:34:0.35:0,0,1	0/0:13,0:13:33:0,33,322	1/1:25,0:24:25.58:183,26,0	1/1:18,0:17:20.40:137,20,0	1/1:3,0:3:5.30:25,5,0
chr10	11690816	.	G	GT	230.97	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=7.207;DP=492;FS=1.673;HRun=0;HaplotypeScore=105.9570;InbreedingCoeff=0.8011;MQ=56.44;MQ0=5;MQRankSum=1.379;QD=4.20;ReadPosRankSum=1.786;VQSLOD=3.6046;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:24:32.70:0,33,429	0/0:10,0:10:17.96:0,18,240	0/0:8,0:6:11.99:0,12,129	0/0:18,0:12:14.03:0,14,217	0/0:13,0:13:12:0,12,138	0/0:15,0:14:1.60:0,2,87	0/0:29,0:28:35.77:0,36,319	0/0:17,0:17:38.59:0,39,457	0/0:14,0:13:21.05:0,21,270	0/0:20,0:20:44.97:0,45,508	0/0:17,0:17:30.08:0,30,382	1/1:15,3:18:12.92:119,13,0	1/1:12,5:16:16.27:111,16,0	1/1:12,3:15:11.93:106,12,0	0/0:10,0:10:12.02:0,12,165	0/0:16,0:16:11.76:0,12,148	0/0:20,0:20:18:0,18,191	0/0:11,0:11:33.06:0,33,416	0/0:18,0:17:48.04:0,48,584	0/0:20,0:20:23.60:0,24,259	0/0:54,0:54:53.73:0,54,599	1/1:3,2:3:3.53:37,4,0	0/0:14,0:14:7.70:0,8,140	0/0:35,0:35:11.60:0,12,164	0/0:16,0:16:48.15:0,48,649	0/0:19,0:18:32.78:0,33,356	0/0:14,0:13:30.06:0,30,365	0/0:4,0:4:12:0,12,142
chr10	11690817	.	CGT	C	284.36	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=6.739;DP=489;FS=0.697;HRun=0;HaplotypeScore=106.4888;InbreedingCoeff=0.8140;MQ=58.00;MQ0=4;MQRankSum=-0.112;QD=5.17;ReadPosRankSum=2.570;VQSLOD=2.5637;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:24:36.03:0,36,460	0/0:10,0:10:17.93:0,18,206	0/0:9,0:6:8.04:0,8,116	0/0:20,0:13:14.55:0,15,123	0/0:13,0:13:18.03:0,18,213	0/0:14,0:13:0.46:0,0,84	0/0:31,0:30:15.53:0,16,245	0/0:17,0:17:45.78:0,46,434	0/0:13,0:12:30.01:0,30,366	0/0:20,0:20:43.01:0,43,662	0/0:17,0:17:30.05:0,30,403	1/1:15,3:19:18.13:149,18,0	1/1:11,5:16:15.25:116,15,0	1/1:10,3:14:15.82:125,16,0	0/0:11,0:11:14.85:0,15,125	0/0:16,0:16:11.99:0,12,100	0/0:21,0:21:20.76:0,21,193	0/0:11,0:11:33.02:0,33,412	0/0:15,0:16:32.76:0,33,462	0/0:18,0:18:21:0,21,199	0/0:51,0:51:52.73:0,53,505	1/1:3,2:3:4.35:40,4,0	0/0:14,0:14:14.38:0,14,104	0/0:36,0:36:11.67:0,12,118	0/0:16,0:16:48.08:0,48,691	0/0:17,0:16:31.32:0,31,424	0/0:14,0:13:30.03:0,30,366	0/0:4,0:4:8.92:0,9,64
chr10	11690819	.	T	TC	2453.04	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=3.870;DP=465;FS=2.499;HRun=1;HaplotypeScore=88.5998;InbreedingCoeff=0.9433;MQ=60.57;MQ0=3;MQRankSum=1.197;QD=25.82;ReadPosRankSum=1.564;VQSLOD=3.7157;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:22:36.12:0,36,467	0/0:8,0:8:18.02:0,18,219	0/0:12,0:7:14.98:0,15,174	0/0:22,0:15:23.19:0,23,211	0/0:9,0:9:18.04:0,18,217	1/1:1,11:11:18.06:270,18,0	1/1:2,25:27:59.95:841,60,0	0/0:17,0:17:45.95:0,46,563	0/0:13,0:12:30.03:0,30,355	0/0:17,0:17:42.14:0,42,541	0/0:17,0:17:33.10:0,33,415	1/1:6,15:21:35.81:514,36,0	1/1:8,9:16:31.30:444,31,0	1/1:4,8:12:30.10:434,30,0	0/0:10,0:10:18.03:0,18,220	0/0:13,0:13:11.77:0,12,156	0/0:19,0:19:20.91:0,21,228	0/0:11,0:11:33.11:0,33,428	0/0:16,0:16:44.17:0,44,547	0/0:18,0:18:20.84:0,21,267	0/0:48,0:48:57.17:0,57,709	1/1:2,4:4:9.03:134,9,0	0/0:15,0:15:10.74:0,11,174	0/0:34,0:34:11.70:0,12,155	0/0:16,0:16:48.15:0,48,610	0/0:15,0:14:39.10:0,39,460	0/0:14,0:13:33.09:0,33,412	0/0:3,0:3:9.03:0,9,117
chr10	11691448	.	T	TCTCTC	3179.39	PASS	AB=0.937;AC=24;AF=0.429;AN=56;BaseQRankSum=5.605;DP=433;FS=36.819;HRun=0;HaplotypeScore=131.5770;InbreedingCoeff=-0.5004;MQ=64.19;MQ0=23;MQRankSum=-3.843;QD=10.13;ReadPosRankSum=4.173;VQSLOD=1.3937;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:13,0:9:32.16:59,0,32	0/1:4,1:5:30.74:110,0,31	0/0:44,0:19:4.85:0,5,170	0/0:34,0:11:14.80:0,15,191	0/1:22,2:24:48.98:255,0,49	0/1:25,0:24:99:351,0,216	0/1:12,0:12:28.04:28,0,171	0/1:30,0:29:99:171,0,501	0/1:10,1:9:57.64:91,0,58	0/1:11,1:12:90.80:139,0,91	0/1:16,2:18:41.48:263,0,41	0/0:9,0:9:19.81:0,20,186	0/1:15,0:14:66.29:66,0,174	0/0:7,0:7:0.27:0,0,40	0/1:14,2:15:8.38:222,0,8	1/1:6,7:14:28.77:587,29,0	0/1:5,1:6:9.63:85,0,10	0/1:8,1:9:16.11:149,0,16	0/1:20,0:18:62.72:63,0,293	0/1:19,0:18:26.05:26,0,201	0/1:5,0:5:21.89:22,0,53	0/0:6,0:5:13.22:0,13,102	0/1:13,2:15:23.10:226,0,23	1/1:5,0:5:2.92:21,3,0	0/0:19,0:19:51.97:0,52,936	0/1:11,2:14:87.90:222,0,88	0/1:15,2:17:57.33:177,0,57	0/1:9,0:5:5.69:6,0,31
chr10	11691505	.	TA	T	778.29	PASS	AC=12;AF=0.222;AN=54;BaseQRankSum=-4.345;DP=473;FS=0.568;HRun=14;HaplotypeScore=128.5618;InbreedingCoeff=0.9071;MQ=72.51;MQ0=5;MQRankSum=7.175;QD=10.81;ReadPosRankSum=5.283;VQSLOD=2.4713;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:17.88:0,18,100	0/0:2,0:3:5.83:0,6,39	0/0:56,2:20:22.55:0,23,160	0/0:40,2:20:19.70:0,20,171	0/0:20,0:21:31.70:0,32,170	1/1:1,18:21:46.67:314,47,0	1/1:1,9:10:17.85:123,18,0	0/0:36,0:34:73.36:0,73,405	0/0:7,0:7:11.56:0,12,66	0/0:17,0:17:34.92:0,35,209	0/0:20,0:24:54.79:0,55,309	1/1:3,6:12:26.87:160,27,0	1/1:0,13:13:20.69:141,21,0	1/1:1,9:10:20.75:143,21,0	0/0:13,0:14:33.73:0,34,202	0/0:13,0:15:40.40:0,40,227	0/0:5,0:9:14.33:0,14,77	0/0:9,0:9:8.76:0,9,54	0/0:13,0:13:23.17:0,23,137	0/0:24,0:24:54.95:0,55,307	./.	1/1:1,5:6:11.75:77,12,0	0/0:16,0:16:28.96:0,29,166	0/0:5,0:5:2.88:0,3,15	0/0:10,0:10:20.86:0,21,168	0/0:22,0:26:54.92:0,55,310	0/0:16,0:16:40.70:0,41,242	0/0:19,0:20:43.02:0,43,271
chr10	11691764	.	AT	A	6438.28	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=10.858;DP=517;FS=4.076;HRun=9;HaplotypeScore=52.3091;InbreedingCoeff=0.9965;MQ=74.04;MQ0=0;MQRankSum=-3.180;QD=22.75;ReadPosRankSum=4.534;VQSLOD=5.5358;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,21:23:60.03:549,60,0	1/1:3,5:8:18:162,18,0	0/0:11,0:11:30.08:0,30,333	0/0:9,1:10:20.06:0,20,194	1/1:2,15:17:36.02:329,36,0	0/0:21,0:21:60.18:0,60,692	0/0:12,0:12:36.08:0,36,394	0/0:37,0:37:93.20:0,93,1010	1/1:2,16:18:42.02:384,42,0	1/1:1,28:29:81.04:740,81,0	1/1:2,14:16:39.02:357,39,0	0/0:22,0:22:66.20:0,66,762	0/0:19,0:20:57:0,57,638	0/0:15,0:15:39.12:0,39,448	1/1:3,23:26:63.02:577,63,0	1/1:0,22:22:66.04:604,66,0	1/1:1,22:23:55.81:520,56,0	1/1:1,13:14:33.02:302,33,0	0/0:22,0:22:51.15:0,51,589	0/0:12,0:12:33.10:0,33,381	0/0:17,0:17:42.11:0,42,475	0/0:8,0:7:18.05:0,18,208	1/1:1,9:10:24.01:219,24,0	1/1:1,12:13:33.02:302,33,0	0/0:26,0:27:78.04:0,78,862	1/1:3,23:26:69.01:625,69,0	1/1:4,22:26:51.03:467,51,0	1/1:1,11:12:33.02:302,33,0
chr10	11692432	.	TGAGAGAGAGAGAGAGA	T	2671.70	PASS	AB=0.977;AC=32;AF=0.696;AN=46;BaseQRankSum=4.224;DP=522;FS=0.000;HRun=0;HaplotypeScore=226.3276;InbreedingCoeff=0.4617;MQ=70.62;MQ0=11;MQRankSum=-3.847;QD=8.62;ReadPosRankSum=0.906;VQSLOD=2.5421;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:20:3:25,3,0	1/1:3,2:5:3.01:130,3,0	0/0:24,0:18:0.47:0,0,1	./.	1/1:7,1:13:0.47:1,0,0	0/0:24,0:24:43.37:0,43,2411	0/0:20,0:18:19.59:0,20,756	./.	1/1:8,9:21:18.06:680,18,0	1/1:16,6:22:11.17:406,11,0	0/0:11,5:17:0:0,0,0	1/1:19,0:23:5.88:44,6,0	1/1:27,0:29:12.98:355,13,0	1/1:5,1:13:6.02:239,6,0	1/1:10,6:17:5.98:70,6,0	1/1:7,1:23:14.27:253,14,0	0/0:15,0:14:2.99:0,3,23	0/1:20,0:21:73.70:133,0,74	0/1:25,0:23:0:0,0,0	./.	./.	1/1:11,0:16:3.01:45,3,0	./.	1/1:23,5:27:0.35:1,0,0	0/0:8,0:7:12.04:0,12,688	1/1:13,4:16:8.53:168,9,0	1/1:10,4:14:3.01:130,3,0	1/1:1,1:2:3.01:128,3,0
chr10	11692462	.	AGAGAGAGAGAGAGAGAGAGAGTGTGTGT	A	2246.34	PASS	AB=1.000;AC=18;AF=0.346;AN=52;BaseQRankSum=6.444;DP=540;FS=35.179;HRun=0;HaplotypeScore=298.8443;InbreedingCoeff=0.1707;MQ=40.20;MQ0=47;MQRankSum=-4.608;QD=8.20;ReadPosRankSum=3.135;VQSLOD=1.4758;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:21,0:17:4.21:4,0,620	0/1:7,0:6:79.55:80,0,283	./.	./.	0/0:14,0:14:5.99:0,6,238	0/0:41,0:40:67.80:0,68,3796	0/0:26,0:21:25.86:0,26,1182	1/1:18,0:16:0.47:1,0,0	0/1:26,0:23:99:359,0,933	0/1:16,0:15:99:242,0,1063	0/0:15,0:14:6.74:0,7,192	1/1:23,1:22:15.04:417,15,0	1/1:9,20:28:15.98:643,16,0	1/1:22,0:20:8.59:392,9,0	0/0:30,0:29:34.76:0,35,1215	0/1:29,0:28:28.88:29,0,628	0/0:19,0:17:33.81:0,34,855	0/1:26,0:25:65.66:66,0,1418	0/0:14,0:13:24.08:0,24,751	0/0:11,0:11:8.46:0,8,201	0/0:20,0:14:6.39:0,6,203	1/1:24,0:22:1.36:80,1,0	0/0:11,0:11:15.05:0,15,681	0/0:30,0:26:16.90:0,17,707	0/0:21,0:18:24.08:0,24,1396	0/1:19,0:17:18.46:18,0,1139	0/1:13,0:12:76.88:77,0,527	0/0:9,0:5:9.03:0,9,382
chr10	11692482	.	AGTGTGTGT	A	505.47	PASS	AB=0.719;AC=7;AF=0.135;AN=52;BaseQRankSum=1.324;DP=619;FS=8.583;HRun=0;HaplotypeScore=218.1070;InbreedingCoeff=0.7897;MQ=42.39;MQ0=53;MQRankSum=-4.462;QD=4.91;ReadPosRankSum=2.662;VQSLOD=1.7115;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:18:26.95:0,27,805	0/0:14,0:13:20.80:0,21,682	./.	./.	0/0:18,0:18:21.07:0,21,666	0/0:44,0:42:47.86:0,48,1233	0/0:25,0:20:17.74:0,18,567	0/0:27,0:24:17.99:0,18,417	0/0:30,0:26:34.82:0,35,971	0/0:19,0:18:39.13:0,39,1242	0/0:15,0:13:3.01:0,3,100	1/1:9,15:22:15.05:351,15,0	1/1:28,0:28:6.02:134,6,0	1/1:13,13:25:6.02:141,6,0	0/0:33,0:32:33.08:0,33,1097	0/0:30,0:29:29.57:0,30,654	0/0:19,0:17:29.99:0,30,761	0/0:24,0:23:42.09:0,42,1109	0/0:26,0:24:40.65:0,41,994	0/0:14,0:14:15.05:0,15,444	0/0:26,0:20:11.50:0,11,359	0/1:14,8:21:0.32:0,0,0	0/0:14,0:14:24.08:0,24,750	0/0:31,0:27:29.73:0,30,888	0/0:24,0:22:24.08:0,24,749	0/0:29,0:27:61.99:0,62,1894	0/0:16,0:16:24.97:0,25,755	0/0:15,0:9:24.03:0,24,704
chr10	11698831	.	GGT	G	662.42	PASS	AB=1.000;AC=12;AF=0.222;AN=54;BaseQRankSum=-4.191;DP=185;FS=4.612;HRun=0;HaplotypeScore=121.4920;InbreedingCoeff=0.4898;MQ=57.19;MQ0=0;MQRankSum=0.632;QD=14.09;ReadPosRankSum=-1.775;VQSLOD=3.2520;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:14.93:0,15,41	0/0:1,0:1:1.82:0,2,5	0/0:4,0:4:8.24:0,8,117	0/1:3,0:3:13.76:14,0,28	0/0:5,0:5:1.55:0,2,4	0/0:4,0:4:7.01:0,7,18	0/0:8,0:8:13.76:0,14,36	1/1:0,11:11:33.10:382,33,0	0/0:6,0:6:12.87:0,13,46	./.	0/0:9,0:9:11.31:0,11,37	0/1:10,0:10:6.12:6,0,27	0/0:12,0:12:3.77:0,4,36	0/0:8,0:8:12.73:0,13,42	0/0:14,0:14:22.84:0,23,63	0/0:6,0:6:8.66:0,9,28	0/0:4,0:4:3.51:0,4,10	1/1:7,0:7:5.38:20,5,0	1/1:0,4:4:12.04:138,12,0	1/1:0,9:9:18.05:190,18,0	1/1:0,3:3:6.02:64,6,0	0/0:8,0:8:7.37:0,7,36	0/0:6,0:6:0.81:0,1,9	0/0:6,0:6:4.59:0,5,15	0/0:9,0:9:13.44:0,13,35	0/0:6,0:6:3.60:0,4,18	0/0:11,0:11:5.63:0,6,16	0/0:1,0:1:0.47:0,0,1
chr10	11698836	.	TAA	T	660.06	PASS	AC=8;AF=0.148;AN=54;BaseQRankSum=-5.113;DP=190;FS=0.000;HRun=2;HaplotypeScore=122.3102;InbreedingCoeff=0.6968;MQ=50.11;MQ0=0;MQRankSum=-2.495;QD=20.63;ReadPosRankSum=-2.561;VQSLOD=0.6922;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:21.68:0,22,119	0/0:1,0:1:2.88:0,3,15	0/0:3,0:3:8.82:0,9,102	0/0:2,0:2:2.75:0,3,30	0/0:5,0:5:3.37:0,3,17	0/0:4,0:4:11.40:0,11,57	0/0:8,0:8:22.69:0,23,114	1/1:1,11:12:36.07:403,36,0	0/0:6,0:6:17.36:0,17,111	./.	0/0:10,0:10:14.26:0,14,85	0/0:10,0:10:23.22:0,23,133	0/0:12,0:12:32.90:0,33,171	0/0:8,0:8:23.21:0,23,133	0/0:14,0:14:34.12:0,34,181	0/0:6,0:6:14.37:0,14,80	0/0:4,0:4:5.67:0,6,30	0/0:7,0:7:18.65:0,19,80	1/1:2,4:6:17.97:177,18,0	1/1:0,9:9:18.05:190,18,0	1/1:2,3:5:5.04:37,5,0	0/0:9,0:9:20.23:0,20,113	0/0:6,0:6:10.73:0,11,49	0/0:6,0:6:5.85:0,6,34	0/0:9,0:9:22.97:0,23,120	0/0:5,0:5:11.35:0,11,67	0/0:11,0:11:22.29:0,22,105	0/0:1,0:1:2.74:0,3,12
chr10	11699514	.	TC	T	808.96	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=9.057;DP=473;FS=1.873;HRun=1;HaplotypeScore=72.5948;InbreedingCoeff=0.9085;MQ=82.33;MQ0=3;MQRankSum=-0.225;QD=13.71;ReadPosRankSum=-1.366;VQSLOD=2.3360;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:76.88:0,77,711	0/0:6,1:7:4.46:0,4,154	0/0:42,0:22:16.97:0,17,305	0/0:32,1:18:30.08:0,30,262	0/0:17,0:17:46.88:0,47,494	0/0:22,0:22:66.18:0,66,863	0/0:10,0:10:30.09:0,30,395	1/1:28,1:29:68.60:508,69,0	0/0:11,0:11:29.64:0,30,295	0/0:18,0:18:48.13:0,48,590	0/0:19,0:19:52.81:0,53,516	0/0:15,0:15:38.59:0,39,525	0/0:14,0:14:36.06:0,36,452	0/0:15,0:15:45.02:0,45,557	0/0:18,0:18:47.70:0,48,464	0/0:21,0:21:63.10:0,63,663	0/0:16,0:16:35.27:0,35,315	0/0:13,0:13:38.86:0,39,353	1/1:12,0:12:25.11:182,25,0	1/1:12,2:14:29.82:227,30,0	1/1:4,0:4:7.20:46,7,0	0/0:3,0:3:9.03:0,9,124	0/0:7,0:7:20.90:0,21,211	0/0:7,0:7:17.09:0,17,188	0/0:22,0:22:66.13:0,66,852	0/0:18,0:18:44.65:0,45,540	0/0:33,0:33:86.38:0,86,763	0/0:5,0:5:12.03:0,12,151
chr10	11699522	.	TTA	T	1702.83	PASS	AB=1.000;AC=10;AF=0.179;AN=56;BaseQRankSum=5.781;DP=504;FS=5.647;HRun=0;HaplotypeScore=83.7535;InbreedingCoeff=0.6574;MQ=83.89;MQ0=3;MQRankSum=1.723;QD=18.71;ReadPosRankSum=-5.692;VQSLOD=1.8096;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:64.09:0,64,395	0/0:8,0:8:2.94:0,3,79	0/0:53,0:26:2.06:0,2,246	0/0:37,0:18:29.35:0,29,240	0/0:20,0:20:9.31:0,9,284	0/0:21,0:21:60.17:0,60,1053	0/0:11,0:11:33.06:0,33,483	1/1:1,30:31:89.70:1004,90,0	0/0:12,0:12:28.33:0,28,194	0/0:19,0:19:21.03:0,21,349	0/0:19,0:19:11.76:0,12,252	0/0:16,0:16:44.91:0,45,657	0/0:14,0:14:41.96:0,42,582	0/0:19,0:19:53.84:0,54,703	0/0:16,0:16:26.31:0,26,205	0/0:19,0:19:55.63:0,56,348	0/0:19,0:19:34.87:0,35,196	0/0:13,0:13:29.23:0,29,170	1/1:0,13:13:38.58:370,39,0	1/1:2,12:14:38.81:375,39,0	1/1:0,2:3:8.98:85,9,0	0/0:3,0:3:9.02:0,9,140	0/1:11,0:11:23.54:24,0,93	0/0:8,0:8:20.42:0,20,155	0/0:21,0:21:63.05:0,63,971	0/1:19,0:19:6.40:6,0,228	0/0:32,0:32:75.83:0,76,463	0/0:6,0:6:14.84:0,15,141
chr10	11699523	.	TA	T	3808.39	PASS	AB=0.726;AC=37;AF=0.661;AN=56;BaseQRankSum=5.333;DP=501;FS=2.054;HRun=14;HaplotypeScore=67.9542;InbreedingCoeff=0.6954;MQ=84.70;MQ0=3;MQRankSum=0.623;QD=11.72;ReadPosRankSum=1.207;VQSLOD=3.7149;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,24:27:61.50:416,61,0	1/1:3,5:8:23.74:160,24,0	0/0:55,0:27:2.70:0,3,131	0/0:35,0:17:18.41:0,18,104	1/1:3,16:20:17.90:236,18,0	0/0:19,0:21:56.89:0,57,508	0/0:11,0:11:24:0,24,212	1/1:31,0:31:71.72:383,72,0	1/1:4,7:11:11.92:98,12,0	1/1:7,12:19:1.83:148,2,0	1/1:3,16:19:41.16:266,41,0	0/0:12,2:16:2.92:0,3,271	0/0:12,1:13:15.41:0,15,266	0/1:15,3:18:2.07:2,0,255	1/1:3,12:16:29.51:197,30,0	1/1:5,14:19:41.64:287,42,0	1/1:1,18:19:32.72:226,33,0	1/1:3,9:12:20.81:144,21,0	1/1:13,0:13:27.35:143,27,0	1/1:14,0:14:32.84:168,33,0	1/1:3,0:3:5.19:17,5,0	0/0:3,0:3:6.01:0,6,55	1/1:2,9:11:17.64:111,18,0	0/1:2,6:8:1.51:85,0,2	0/0:20,1:21:27.47:0,27,389	1/1:3,15:19:43.56:288,44,0	1/1:5,27:32:39.82:421,40,0	0/1:4,2:6:11.62:12,0,36
chr10	11708819	.	G	GACACACACACACAC	24868.15	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=1.186;DP=730;FS=0.447;HRun=0;HaplotypeScore=338.6122;InbreedingCoeff=0.8707;MQ=63.10;MQ0=2;MQRankSum=-10.220;QD=42.51;ReadPosRankSum=3.661;VQSLOD=3.4081;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:25:17.48:391,17,0	1/1:10,0:10:8.98:220,9,0	0/0:58,0:41:75.54:0,76,2063	0/0:59,0:45:81.91:0,82,1339	1/1:33,0:33:21.01:442,21,0	1/1:19,0:21:30.05:763,30,0	1/1:20,0:19:20.64:614,21,0	1/1:29,0:28:71.77:1216,72,0	1/1:18,0:18:21.03:674,21,0	1/1:34,0:34:83.16:2089,83,0	1/1:24,0:24:21.01:252,21,0	1/1:25,9:36:57.15:2904,57,0	1/1:16,10:30:69.12:3167,69,0	1/1:28,7:36:51.10:2262,51,0	1/1:34,0:34:23.99:497,24,0	1/1:24,0:24:18.03:566,18,0	1/1:10,0:10:21.04:816,21,0	1/1:9,0:9:20.94:485,21,0	1/1:18,0:18:44.81:945,45,0	1/1:15,0:15:21.02:1102,21,0	1/1:16,0:16:6.47:204,6,0	1/1:21,6:25:33.05:1379,33,0	1/1:16,0:16:8.75:111,9,0	1/1:26,0:26:11.82:214,12,0	0/0:27,0:27:78.22:0,78,2573	1/1:36,0:36:99:2181,102,0	1/1:31,0:33:44.96:1039,45,0	1/1:4,0:4:6.02:338,6,0
chr10	11708837	.	C	CACACACACACACACACAG	38566.61	PASS	AB=1.000;AC=34;AF=0.607;AN=56;BaseQRankSum=6.963;DP=756;FS=15.736;HRun=0;HaplotypeScore=441.3465;InbreedingCoeff=-0.1969;MQ=62.69;MQ0=2;MQRankSum=-10.898;QD=61.51;ReadPosRankSum=7.968;VQSLOD=2.5574;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:27:33.11:315,0,33	1/1:8,0:8:3.01:169,3,0	0/0:52,0:37:98.02:0,98,2562	0/0:41,0:33:36.24:0,36,1222	0/1:35,0:35:34.22:377,0,34	0/1:21,0:21:19.32:1439,0,19	0/1:25,0:24:41.24:1302,0,41	1/1:18,0:39:99:4288,111,0	0/1:15,0:15:18.86:877,0,19	0/1:39,0:38:73.73:3794,0,74	0/1:25,0:25:14.38:556,0,14	1/1:35,0:35:22.30:2886,22,0	1/1:30,0:30:18.92:2491,19,0	0/1:36,0:36:76.47:2321,0,76	0/1:38,0:38:69.72:436,0,70	0/1:22,0:22:8.88:1195,0,9	0/1:11,0:11:10.18:636,0,10	0/1:7,0:7:36.88:702,0,37	1/1:7,1:34:99:4261,99,0	1/1:6,9:23:24.08:1968,24,0	1/1:18,0:18:27.52:772,28,0	0/1:27,0:25:37.32:924,0,37	0/1:17,0:17:34.37:391,0,34	0/1:25,0:25:6.90:754,0,7	0/0:32,0:32:93.27:0,93,3532	1/1:35,0:35:39.20:3665,39,0	0/1:28,0:28:27.91:1278,0,28	1/1:6,0:6:12.04:765,12,0
chr10	11709292	.	G	GTA	5150.67	PASS	AB=0.767;AC=48;AF=0.857;AN=56;BaseQRankSum=3.595;DP=491;FS=12.554;HRun=0;HaplotypeScore=150.3019;InbreedingCoeff=0.7487;MQ=57.44;MQ0=9;MQRankSum=-5.055;QD=12.41;ReadPosRankSum=2.225;VQSLOD=4.2098;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:15:19.43:116,19,0	1/1:9,0:9:13.65:86,14,0	0/0:27,0:13:36:0,36,370	0/0:27,0:17:47.91:0,48,448	1/1:25,0:25:49.61:347,50,0	1/1:16,1:17:30.99:275,31,0	0/1:2,13:16:0:0,0,0	1/1:20,0:20:56.84:486,57,0	1/1:14,0:14:21.43:106,21,0	1/1:23,0:23:44.93:331,45,0	1/1:21,0:21:40.46:263,40,0	1/1:13,6:19:33.83:437,34,0	1/1:3,7:10:4.51:23,5,0	1/1:12,4:16:33.81:354,34,0	1/1:22,0:21:34.60:173,35,0	1/1:20,0:20:39.99:235,40,0	1/1:16,0:16:33.25:212,33,0	0/1:9,0:9:2.02:88,0,2	1/1:15,0:15:44.87:371,45,0	1/1:23,2:25:8.70:68,9,0	1/1:9,0:9:16.13:149,16,0	1/1:2,12:13:6.23:64,6,0	1/1:13,0:13:21.35:165,21,0	1/1:15,0:14:17.46:127,17,0	0/0:22,0:22:66.02:0,66,683	1/1:22,0:22:53.06:394,53,0	1/1:23,0:22:42.31:264,42,0	1/1:6,0:6:7.01:19,7,0
chr10	11709293	.	T	TATACACACAC	5231.02	PASS	AB=1.000;AC=35;AF=0.625;AN=56;BaseQRankSum=-8.633;DP=518;FS=7.965;HRun=0;HaplotypeScore=232.6300;InbreedingCoeff=-0.1899;MQ=56.24;MQ0=12;MQRankSum=5.026;QD=11.86;ReadPosRankSum=-3.858;VQSLOD=2.0174;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:17,0:15:79.96:80,0,132	0/1:9,0:9:55.93:56,0,137	0/0:27,0:13:36:0,36,370	0/0:27,0:17:47.91:0,48,448	0/1:25,0:25:99:268,0,255	1/1:22,0:22:31.76:350,32,0	1/1:17,0:17:0.89:3,1,0	1/1:24,0:24:65.83:584,66,0	0/1:15,0:14:40.88:41,0,361	0/1:21,0:20:78.83:265,0,79	0/1:21,0:21:99:182,0,367	1/1:20,0:20:42.04:616,42,0	1/1:14,0:14:9.50:178,10,0	1/1:16,0:16:36.01:450,36,0	0/1:22,0:21:64.78:65,0,703	0/1:20,0:20:99:139,0,457	0/1:16,0:16:99:156,0,136	0/1:8,0:8:42.06:88,0,42	1/1:19,0:19:51.08:549,51,0	1/1:8,15:28:5.95:120,6,0	1/1:12,0:12:17.96:220,18,0	1/1:15,0:14:2.89:31,3,0	0/1:13,0:13:30.90:140,0,31	0/1:15,0:14:75.14:100,0,75	0/0:23,0:23:68.98:0,69,1055	0/1:22,0:22:99:303,0,244	0/1:23,0:22:99:180,0,306	0/1:7,0:7:67.69:68,0,185
chr10	11709324	.	ACACACACACACACACC	A	12395.81	PASS	AB=0.759;AC=28;AF=0.500;AN=56;BaseQRankSum=7.969;DP=566;FS=9.225;HRun=0;HaplotypeScore=228.5923;InbreedingCoeff=0.8176;MQ=48.46;MQ0=27;MQRankSum=-5.446;QD=42.74;ReadPosRankSum=7.428;VQSLOD=2.5219;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,20:25:12.51:568,13,0	1/1:2,6:7:9.03:428,9,0	0/0:27,0:9:26.76:0,27,269	0/0:23,0:7:14.42:0,14,140	1/1:4,21:24:21.07:937,21,0	0/0:22,0:22:55.09:0,55,1498	0/0:17,0:17:22.99:0,23,268	0/0:33,0:31:87.19:0,87,2910	1/1:2,22:23:24.06:1140,24,0	1/1:7,14:19:35:710,35,0	1/1:1,21:22:24.08:1138,24,0	0/0:16,0:16:24.08:0,24,1455	0/0:21,0:21:42.80:0,43,1284	0/0:15,0:15:36.04:0,36,1418	1/1:3,25:27:44:2116,44,0	1/1:4,15:19:30.10:1353,30,0	1/1:11,4:15:21.23:672,21,0	0/1:8,0:8:74.27:74,0,122	0/0:20,0:21:61.01:0,61,1597	0/0:21,0:21:33.94:0,34,1031	0/0:16,0:16:28:0,28,713	0/0:16,0:16:26.98:0,27,619	1/1:2,11:13:6.43:279,6,0	1/1:4,13:16:8.61:301,9,0	0/0:27,0:27:81:0,81,3473	1/1:5,18:23:51.75:1144,52,0	1/1:7,19:24:21.03:978,21,0	0/1:1,13:14:99:556,0,170
chr10	11709338	.	A	ACCCACC	3155.30	PASS	AB=1.000;AC=14;AF=0.250;AN=56;BaseQRankSum=-2.138;DP=558;FS=6.150;HRun=0;HaplotypeScore=205.6885;InbreedingCoeff=0.7470;MQ=55.11;MQ0=24;MQRankSum=-4.172;QD=21.61;ReadPosRankSum=-2.790;VQSLOD=1.9639;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:21:13.29:0,13,178	0/0:7,0:6:9.03:0,9,128	0/0:33,0:16:35.93:0,36,744	0/0:24,0:11:8.59:0,9,280	0/0:22,0:21:18.06:0,18,257	1/1:19,0:19:37.85:612,38,0	1/1:18,0:18:40.98:499,41,0	0/0:38,0:36:4.89:0,5,1101	0/0:23,0:22:24.08:0,24,341	0/0:17,0:15:33.11:0,33,501	0/0:21,0:21:24.08:0,24,342	1/1:6,13:24:18.06:494,18,0	1/1:18,1:19:43.35:651,43,0	1/1:9,4:14:27.78:699,28,0	0/0:27,0:25:44.80:0,45,640	0/0:17,0:17:30.10:0,30,428	0/0:13,0:13:20.94:0,21,263	0/0:11,0:11:13.40:0,13,374	0/0:28,0:28:35.80:0,36,950	0/1:22,0:22:3.38:3,0,495	0/1:15,0:15:28.32:28,0,230	1/1:14,0:15:17.59:355,18,0	0/0:11,0:11:4.26:0,4,45	0/0:15,0:14:9.03:0,9,121	0/0:28,0:28:53.90:0,54,1280	0/0:19,0:19:51.12:0,51,751	0/0:21,0:20:21.07:0,21,299	0/0:14,0:14:15.05:0,15,210
chr10	11709658	.	A	ATGG	8764.65	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=18.464;DP=722;FS=5.656;HRun=0;HaplotypeScore=133.9151;InbreedingCoeff=0.9991;MQ=83.94;MQ0=0;MQRankSum=-6.964;QD=55.83;ReadPosRankSum=2.576;VQSLOD=6.8553;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,105,1843	0/0:7,0:7:21.07:0,21,370	0/0:18,0:18:51.17:0,51,888	0/0:32,0:32:93.25:0,93,1561	0/0:32,0:32:87.30:0,87,1522	1/1:1,29:30:90.31:1794,90,0	1/1:3,16:19:54.18:847,54,0	0/0:36,0:36:99:0,99,1693	0/0:20,0:20:60.21:0,60,1058	0/0:29,0:29:87.30:0,87,1535	0/0:21,0:21:57.20:0,57,1000	1/1:2,26:28:84.29:1687,84,0	1/1:3,25:29:81.22:1530,81,0	1/1:4,18:22:63.21:1233,63,0	0/0:25,0:25:72.22:0,72,1213	0/0:30,0:30:87.28:0,87,1498	0/0:18,0:18:51.17:0,51,893	0/0:15,0:15:45.15:0,45,786	0/0:20,0:20:60.19:0,60,1018	0/0:38,0:38:99:0,108,1843	0/0:37,0:37:99:0,111,1959	1/1:4,25:29:87.28:1674,87,0	0/0:21,0:21:54.17:0,54,924	0/0:13,0:13:39.13:0,39,684	0/0:34,0:34:99:0,102,1769	0/0:33,0:33:96.33:0,96,1689	0/0:35,0:35:99:0,102,1795	0/0:15,0:15:39.13:0,39,688
chr10	11709660	.	ACC	A	5358.45	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=18.083;DP=715;FS=7.181;HRun=2;HaplotypeScore=128.6322;InbreedingCoeff=0.9992;MQ=84.35;MQ0=0;MQRankSum=-5.910;QD=35.25;ReadPosRankSum=3.833;VQSLOD=4.7626;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,105,2095	0/0:7,0:7:21.07:0,21,426	0/0:18,0:18:54.19:0,54,1056	0/0:32,0:32:93.18:0,93,1814	0/0:31,0:31:87.26:0,87,1692	1/1:0,29:29:83.14:1071,83,0	1/1:1,16:17:47.95:402,48,0	0/0:38,0:38:99:0,111,2234	0/0:20,0:20:60.21:0,60,1219	0/0:30,0:30:90.30:0,90,1795	0/0:20,0:20:57.20:0,57,1147	1/1:2,26:28:81.14:1065,81,0	1/1:2,26:28:80.86:1014,81,0	1/1:4,18:22:63.40:788,63,0	0/0:25,0:25:75.26:0,75,1523	0/0:29,0:29:87.28:0,87,1731	0/0:18,0:18:51.18:0,51,1036	0/0:16,0:16:48.13:0,48,935	0/0:21,0:21:63.21:0,63,1238	0/0:37,0:37:99:0,108,2184	0/0:37,0:37:99:0,111,2255	1/1:3,25:28:78.14:1018,78,0	0/0:18,0:18:51.18:0,51,1032	0/0:13,0:13:39.13:0,39,792	0/0:33,0:33:99:0,99,2011	0/0:33,0:33:96.32:0,96,1914	0/0:37,0:37:99:0,111,2229	0/0:15,0:15:45.15:0,45,911
chr10	11716004	.	A	AGTT	11931.37	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-15.527;DP=877;FS=4.564;HRun=0;HaplotypeScore=107.0697;InbreedingCoeff=0.9999;MQ=79.55;MQ0=0;MQRankSum=-7.435;QD=50.99;ReadPosRankSum=1.446;VQSLOD=7.3162;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,141,2265	0/0:11,0:11:33.11:0,33,530	0/0:23,0:23:60.68:0,61,951	0/0:21,0:21:54.12:0,54,796	0/0:23,0:23:63.21:0,63,1010	1/1:1,31:31:72.25:1590,72,0	1/1:0,42:43:99:2497,114,0	0/0:26,0:26:72.24:0,72,1124	0/0:33,0:33:87.30:0,87,1383	0/0:41,0:41:99:0,114,1780	0/0:20,0:20:57.19:0,57,916	1/1:5,42:48:99:2449,111,0	1/1:3,40:43:99:2291,105,0	1/1:3,39:43:81.28:1782,81,0	0/0:39,0:39:99:0,111,1759	0/0:44,0:44:99:0,129,2035	0/0:24,0:24:72.22:0,72,1132	0/0:31,0:31:66.22:0,66,1060	0/0:24,0:24:53.39:0,53,791	0/0:26,0:26:72.25:0,72,1155	0/0:25,0:25:75.26:0,75,1204	1/1:2,23:25:60.21:1322,60,0	0/0:32,0:32:90.31:0,90,1440	0/0:35,0:34:87.30:0,87,1395	0/0:36,0:36:99:0,105,1662	0/0:27,0:27:72.23:0,72,1134	0/0:31,0:31:84.27:0,84,1325	0/0:22,0:22:66.23:0,66,1060
chr10	11716292	.	C	CT	21009.15	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-10.446;DP=870;FS=4.990;HRun=5;HaplotypeScore=84.8118;InbreedingCoeff=1.0000;MQ=86.20;MQ0=0;MQRankSum=-5.120;QD=35.37;ReadPosRankSum=3.154;VQSLOD=4.5412;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,44:46:99:1618,123,0	1/1:0,16:16:42.14:553,42,0	0/0:26,0:27:62.74:0,63,655	0/0:32,0:32:72.08:0,72,733	1/1:7,26:33:81.22:1041,81,0	0/0:26,0:26:78.20:0,78,838	0/0:34,0:34:99:0,99,1056	1/1:3,33:36:99:1275,99,0	1/1:0,26:26:75.24:987,75,0	1/1:1,37:38:99:1449,114,0	1/1:0,19:19:57.19:750,57,0	0/0:21,0:21:63.16:0,63,677	0/0:30,0:30:87.22:0,87,934	0/0:33,0:33:87.20:0,87,927	1/1:1,36:37:99:1381,105,0	1/1:1,31:32:90.29:1184,90,0	1/1:2,44:46:99:1658,126,0	1/1:1,24:25:72.23:947,72,0	1/1:4,16:20:51.17:671,51,0	1/1:5,24:29:69.22:908,69,0	1/1:5,43:48:99:1657,126,0	0/0:37,0:37:99:0,99,1055	1/1:3,34:37:96.31:1263,96,0	1/1:1,31:32:81.26:1066,81,0	0/0:36,0:36:87.18:0,87,921	1/1:2,25:27:75.20:942,75,0	1/1:2,29:31:78.25:1026,78,0	1/1:0,16:16:48.16:632,48,0
chr10	11716434	.	T	TC	14907.24	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-14.591;DP=800;FS=1.853;HRun=4;HaplotypeScore=105.2311;InbreedingCoeff=0.9867;MQ=76.92;MQ0=0;MQRankSum=-1.504;QD=34.67;ReadPosRankSum=4.101;VQSLOD=4.5122;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,46:52:99:1559,114,0	1/1:0,7:7:12.04:164,12,0	0/0:22,0:22:60.08:0,60,646	0/0:22,0:23:36.14:0,36,503	1/1:1,26:27:63.21:861,63,0	0/0:30,0:30:87.23:0,87,974	0/0:35,0:35:99:0,99,1113	0/0:28,0:28:75.21:0,75,850	1/1:4,20:24:54.15:721,54,0	1/1:3,32:35:96.29:1278,96,0	1/1:5,16:21:42.14:574,42,0	0/0:30,0:30:87.25:0,87,986	0/0:30,0:30:87.19:0,87,960	0/0:31,0:31:87.25:0,87,984	1/1:3,33:36:99:1436,105,0	1/1:1,28:29:75.25:1026,75,0	1/1:5,45:50:99:1973,147,0	1/1:0,38:38:99:1477,108,0	0/0:19,0:19:51.14:0,51,571	0/0:29,0:29:81.20:0,81,899	0/0:40,0:40:99:0,108,1203	0/0:30,0:30:90.26:0,90,1020	1/1:0,11:11:18.06:244,18,0	1/1:6,31:37:99:1402,105,0	0/0:23,0:23:66.19:0,66,748	1/1:3,27:30:81.27:1107,81,0	1/1:0,30:30:72.15:961,72,0	1/1:0,3:3:9.03:123,9,0
chr10	11717147	.	T	TG	10363.79	PASS	AB=0.562;AC=40;AF=0.714;AN=56;BaseQRankSum=-7.536;DP=672;FS=0.354;HRun=8;HaplotypeScore=81.9062;InbreedingCoeff=0.8262;MQ=89.54;MQ0=0;MQRankSum=-4.450;QD=21.15;ReadPosRankSum=4.376;VQSLOD=4.8719;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,29:32:90.26:1028,90,0	1/1:1,11:12:23.49:277,23,0	0/0:22,0:22:36.12:0,36,390	0/0:33,0:33:44.77:0,45,574	1/1:1,21:22:60.18:692,60,0	1/1:5,3:23:40.11:243,40,0	1/1:9,0:27:31.72:160,32,0	0/0:20,0:20:26.21:0,26,269	1/1:2,25:27:41.74:734,42,0	1/1:9,18:27:26.66:539,27,0	1/1:1,13:14:39.12:450,39,0	1/1:3,1:20:31.23:179,31,0	1/1:8,0:25:31.51:170,32,0	1/1:4,2:23:42.61:216,43,0	0/1:7,19:26:20.77:528,0,21	1/1:3,23:26:44.75:769,45,0	1/1:3,15:18:42.12:485,42,0	1/1:6,18:24:48.14:554,48,0	0/0:15,0:15:38.99:0,39,350	0/0:40,0:40:99:0,102,931	0/0:35,0:35:83.99:0,84,759	1/1:6,0:12:11.36:58,11,0	1/1:5,23:28:54.15:614,54,0	1/1:5,17:21:48.14:554,48,0	0/0:17,0:17:48:0,48,431	1/1:8,27:35:50.76:836,51,0	0/1:5,24:29:10.18:655,0,10	1/1:0,18:18:54.16:623,54,0
chr10	11718368	.	AC	A	15524.01	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=13.301;DP=755;FS=1.154;HRun=1;HaplotypeScore=76.0235;InbreedingCoeff=0.9991;MQ=85.55;MQ0=0;MQRankSum=-4.491;QD=39.01;ReadPosRankSum=7.125;VQSLOD=4.6589;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,51:51:99:2011,144,0	1/1:0,10:10:21.02:293,21,0	0/0:37,0:37:99:0,108,1672	0/0:25,0:25:71.94:0,72,1054	1/1:0,27:27:78.18:1065,78,0	0/0:28,0:28:84.25:0,84,1276	0/0:19,0:19:57.17:0,57,857	0/0:31,0:31:93.31:0,93,1464	1/1:0,22:22:57.19:796,57,0	1/1:0,34:34:99:1407,102,0	1/1:0,25:25:69.14:938,69,0	0/0:34,0:34:99:0,102,1599	0/0:32,0:32:96.33:0,96,1533	0/0:31,0:31:93.32:0,93,1485	1/1:0,40:40:99:1551,111,0	1/1:0,40:40:99:1425,102,0	1/1:0,23:23:63.21:881,63,0	1/1:0,13:13:39.13:545,39,0	0/0:24,0:24:69.21:0,69,1053	0/0:18,0:18:54.17:0,54,831	0/0:37,0:37:99:0,111,1695	0/0:25,0:25:75.26:0,75,1190	1/1:0,21:21:63.21:877,63,0	1/1:0,34:34:96.32:1341,96,0	0/0:16,0:16:48.16:0,48,767	1/1:0,29:29:87.25:1179,87,0	1/1:0,21:21:63.21:881,63,0	1/1:0,8:8:24.08:335,24,0
chr10	11719595	.	AG	A	4731.69	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=12.469;DP=909;FS=16.079;HRun=2;HaplotypeScore=84.3148;InbreedingCoeff=1.0000;MQ=79.38;MQ0=0;MQRankSum=-0.399;QD=35.31;ReadPosRankSum=-1.308;VQSLOD=2.9440;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,150,2222	0/0:19,0:19:57.17:0,57,832	0/0:22,0:22:57.15:0,57,806	0/0:20,0:20:60.13:0,60,854	0/0:23,0:23:69.23:0,69,1031	0/0:23,0:23:69.22:0,69,1012	0/0:33,0:33:96.31:0,96,1418	1/1:0,37:37:99:1388,108,0	0/0:33,0:33:90.29:0,90,1317	0/0:38,0:38:99:0,111,1647	0/0:16,0:16:48.15:0,48,692	0/0:32,0:32:93.28:0,93,1333	0/0:36,0:36:99:0,105,1574	0/0:35,0:35:99:0,102,1497	0/0:53,0:53:99:0,156,2260	0/0:57,0:57:99:0,172,2521	0/0:45,0:45:99:0,135,2019	0/0:36,0:35:99:0,105,1496	1/1:1,16:17:48.13:596,48,0	1/1:0,23:23:63.17:800,63,0	1/1:1,56:57:99:1948,150,0	0/0:30,0:30:84.28:0,84,1258	0/0:22,0:22:66.21:0,66,967	0/0:31,0:31:90.27:0,90,1289	0/0:27,0:27:81.27:0,81,1211	0/0:45,0:45:99:0,132,1941	0/0:35,0:35:99:0,105,1565	0/0:13,0:13:39.13:0,39,582
chr10	11719869	.	G	GACACGC	1279.85	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-2.784;DP=734;FS=2.704;HRun=0;HaplotypeScore=150.9003;InbreedingCoeff=0.9118;MQ=64.71;MQ0=3;MQRankSum=-3.471;QD=15.24;ReadPosRankSum=-3.946;VQSLOD=2.2009;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:69.21:0,69,1417	0/0:8,0:8:21.07:0,21,444	0/0:32,0:25:12:0,12,519	0/0:35,0:32:46.18:0,46,881	0/0:13,0:13:27.08:0,27,500	0/0:18,0:17:39.13:0,39,825	0/0:48,0:48:91.91:0,92,1845	1/1:16,0:17:27.09:469,27,0	0/0:29,0:29:63.21:0,63,1252	0/0:22,0:22:60.21:0,60,1224	0/0:8,0:8:15.05:0,15,317	0/0:36,0:36:81.28:0,81,1680	0/0:35,0:35:81.22:0,81,1604	0/0:30,0:30:72.25:0,72,1483	0/0:31,0:31:75.26:0,75,1511	0/0:28,0:28:48.15:0,48,948	0/0:34,0:34:43.99:0,44,1314	0/0:28,0:28:51.15:0,51,1019	1/1:4,7:14:24.08:634,24,0	1/1:4,10:16:9.03:235,9,0	1/1:13,22:36:2.43:87,2,0	0/0:23,0:23:54.17:0,54,1054	0/0:18,0:18:33.11:0,33,698	0/0:58,0:58:99:0,144,2962	0/0:18,0:18:45.15:0,45,921	0/0:27,0:27:57.19:0,57,1158	0/0:22,0:22:45.15:0,45,938	0/0:13,0:13:36.12:0,36,744
chr10	11722057	.	ACAGCAG	A	5937.37	PASS	AB=1.000;AC=40;AF=0.833;AN=48;BaseQRankSum=-0.276;DP=662;FS=0.000;HRun=0;HaplotypeScore=119.5921;InbreedingCoeff=0.4559;MQ=60.91;MQ0=12;MQRankSum=0.010;QD=10.42;ReadPosRankSum=0.561;VQSLOD=3.6728;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,3:24:0:0,0,0	1/1:2,4:6:6.01:87,6,0	0/1:19,0:10:0.93:1,0,11	0/0:23,0:17:4.14:0,4,67	./.	0/1:15,0:15:0:0,0,0	1/1:32,37:69:29.68:504,30,0	1/1:12,0:12:2.99:27,3,0	1/1:9,20:30:27:404,27,0	1/1:25,0:23:8.92:87,9,0	./.	1/1:18,27:43:59.80:1004,60,0	1/1:9,19:28:26.73:474,27,0	1/1:9,31:39:53.88:893,54,0	1/1:14,18:33:47.74:695,48,0	1/1:8,20:29:33.11:612,33,0	1/1:9,15:24:12:246,12,0	1/1:10,15:25:18.01:349,18,0	1/1:12,0:12:1.55:4,2,0	./.	1/1:46,20:65:5.49:39,5,0	./.	1/1:7,0:6:2.90:27,3,0	1/1:23,16:39:11.98:147,12,0	0/0:10,0:10:3.01:0,3,83	1/1:20,0:20:3:26,3,0	1/1:7,6:13:9.03:186,9,0	1/1:4,8:12:6.02:124,6,0
chr10	11722842	.	GTC	G	1151.76	PASS	AB=0.841;AC=20;AF=0.357;AN=56;BaseQRankSum=7.467;DP=463;FS=6.111;HRun=0;HaplotypeScore=92.5059;InbreedingCoeff=-0.2649;MQ=64.23;MQ0=18;MQRankSum=-6.322;QD=4.14;ReadPosRankSum=6.624;VQSLOD=1.2456;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:8,3:10:56.25:135,0,56	1/1:3,1:3:7.26:44,7,0	0/0:114,2:39:49.39:0,49,475	0/1:104,1:30:36.93:37,0,119	0/1:6,1:7:48.63:49,0,73	0/0:9,0:9:25.89:0,26,218	0/0:4,0:3:8.93:0,9,79	0/0:19,0:19:2.11:0,2,253	0/1:5,1:6:11.06:26,0,11	0/1:6,1:7:32.27:56,0,32	0/1:5,4:10:3.39:140,0,3	0/0:11,0:11:25.43:0,25,199	0/0:6,0:7:19.73:0,20,148	0/0:3,0:3:5.95:0,6,55	0/1:5,4:9:71.71:111,0,72	0/1:9,4:13:58.73:147,0,59	0/1:11,1:12:19.77:20,0,90	0/1:11,1:12:48.31:48,0,119	0/1:10,1:11:31.17:104,0,31	0/1:9,0:9:7.61:8,0,75	0/0:4,0:4:11.82:0,12,77	0/0:2,0:2:5.90:0,6,41	0/1:5,1:6:35.43:43,0,35	0/1:4,0:5:18.10:18,0,51	0/0:7,0:7:16.54:0,17,124	0/1:12,3:15:77.28:77,0,82	0/1:12,4:17:31.95:160,0,32	1/1:10,0:11:16.96:93,17,0
chr10	11722844	.	CTT	C	2059.63	PASS	AB=0.856;AC=35;AF=0.625;AN=56;BaseQRankSum=-0.743;DP=497;FS=3.392;HRun=16;HaplotypeScore=91.5122;InbreedingCoeff=0.6000;MQ=61.95;MQ0=24;MQRankSum=0.428;QD=6.54;ReadPosRankSum=2.320;VQSLOD=0.6366;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,2:10:17.18:125,17,0	1/1:2,2:3:8.99:75,9,0	0/0:124,0:39:33.78:0,34,235	0/1:118,0:29:5.84:6,0,83	0/1:5,0:7:0.12:40,0,0	0/0:10,0:10:11.86:0,12,106	0/0:4,0:4:5.38:0,5,48	1/1:15,5:20:5.73:131,6,0	1/1:4,0:6:11.48:74,11,0	1/1:4,3:7:14.01:106,14,0	1/1:8,1:9:6.42:154,6,0	0/0:10,0:11:17.76:0,18,129	0/0:6,0:7:11.92:0,12,111	0/0:1,0:3:3:0,3,29	1/1:8,1:9:14.88:122,15,0	1/1:10,1:13:8.32:140,8,0	1/1:10,3:14:18.79:145,19,0	0/1:10,3:12:17.97:98,0,18	1/1:10,3:12:15.79:141,16,0	1/1:5,4:9:11.87:98,12,0	0/0:4,0:4:0:0,0,0	0/0:2,0:2:3:0,3,28	1/1:3,3:6:5.96:50,6,0	1/1:5,0:5:5.66:35,6,0	0/0:8,0:7:7.32:0,7,113	1/1:9,6:15:20.96:204,21,0	1/1:12,3:17:28.42:236,28,0	1/1:4,7:11:32.76:264,33,0
chr10	11722880	.	T	TGG	223	PASS	AB=0.958;AC=12;AF=0.214;AN=56;BaseQRankSum=2.362;DP=609;FS=11.254;HRun=0;HaplotypeScore=96.3356;InbreedingCoeff=-0.1416;MQ=25.80;MQ0=96;MQRankSum=-1.386;QD=1.43;ReadPosRankSum=2.274;VQSLOD=1.1926;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:11,1:10:67.08:67,0,93	0/0:3,0:3:8.97:0,9,69	0/0:164,0:19:38.15:0,38,456	0/0:157,0:20:12.55:0,13,251	0/0:10,0:9:7.63:0,8,118	0/0:7,0:7:15.01:0,15,177	0/0:3,0:2:5.97:0,6,55	0/0:19,0:15:28.91:0,29,360	0/1:9,0:6:23.04:23,0,71	0/1:12,0:6:11.07:11,0,83	0/1:7,0:6:16.93:17,0,20	0/0:6,0:4:12.04:0,12,146	0/0:8,0:4:12.03:0,12,142	0/0:6,0:5:9.03:0,9,119	0/0:9,0:6:14.92:0,15,112	0/1:14,1:14:63.26:63,0,78	0/1:17,0:15:11.41:11,0,162	0/1:13,0:7:14.01:14,0,50	0/0:14,0:7:20.84:0,21,247	0/0:10,0:6:12.04:0,12,156	0/0:8,0:3:9.03:0,9,107	0/0:3,0:2:3.01:0,3,34	1/1:8,0:5:5.72:34,6,0	0/0:8,0:5:5.98:0,6,46	0/0:17,0:11:27.06:0,27,330	0/1:17,1:12:67.30:105,0,67	0/1:17,0:15:12.59:13,0,161	0/1:24,1:14:10.17:10,0,144
chr10	11722881	.	T	TGG	555.43	PASS	AB=0.912;AC=12;AF=0.214;AN=56;BaseQRankSum=1.004;DP=597;FS=8.151;HRun=0;HaplotypeScore=92.2400;InbreedingCoeff=-0.1212;MQ=25.64;MQ0=95;MQRankSum=-0.734;QD=3.94;ReadPosRankSum=1.632;VQSLOD=1.7689;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:12,0:10:48.14:48,0,69	0/0:3,0:3:8.31:0,8,49	0/0:161,0:19:31.29:0,31,439	0/0:153,0:18:6.68:0,7,271	0/1:10,1:9:11.77:12,0,107	0/0:8,0:8:15.72:0,16,170	0/0:3,0:2:5.97:0,6,55	0/0:17,0:13:29.32:0,29,345	0/1:9,0:6:49.27:59,0,49	0/1:12,1:7:54.81:55,0,89	0/1:4,2:5:5.72:69,0,6	0/0:6,0:4:12.02:0,12,132	0/0:8,0:4:11.82:0,12,122	0/0:6,0:5:9.03:0,9,117	0/0:8,0:5:11.89:0,12,84	0/1:10,2:11:80.62:108,0,81	0/1:16,2:15:60.45:60,0,133	0/1:13,0:7:29.80:30,0,57	0/0:14,0:7:18.02:0,18,217	0/0:10,0:6:15.03:0,15,178	0/0:8,0:3:9.02:0,9,105	0/0:3,0:2:3.01:0,3,33	1/1:5,2:4:5.86:77,6,0	0/0:8,0:5:5.93:0,6,41	0/0:16,0:10:24.06:0,24,294	0/1:20,1:14:95.06:95,0,96	0/1:16,2:16:90.05:90,0,156	0/0:24,0:13:15.51:0,16,173
chr10	11722925	.	GT	G	176.37	PASS	AB=1.000;AC=31;AF=0.574;AN=54;BaseQRankSum=3.638;DP=506;FS=20.344;HRun=8;HaplotypeScore=95.2085;InbreedingCoeff=0.2348;MQ=43.85;MQ0=48;MQRankSum=-1.839;QD=1.29;ReadPosRankSum=1.862;VQSLOD=-0.7240;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:12,0:10:6.70:14,0,7	1/1:7,0:6:0.82:4,1,0	0/0:156,3:21:3.70:0,4,99	0/0:154,3:20:1.15:0,1,105	1/1:8,0:8:4.61:12,5,0	1/1:7,0:6:1.89:6,2,0	0/0:2,0:2:0:0,0,0	0/0:13,0:11:17.61:0,18,107	0/1:5,0:5:0.50:1,0,27	0/1:6,0:6:10.03:10,0,14	1/1:6,0:5:0.11:1,0,0	1/1:1,2:3:8.14:47,8,0	1/1:0,2:2:5.94:41,6,0	1/1:0,1:1:2.98:22,3,0	1/1:7,0:7:0.57:4,1,0	0/1:6,0:6:4.10:29,0,4	1/1:13,0:13:11.34:32,11,0	0/0:9,0:9:5.32:0,5,30	./.	0/0:6,0:6:3.57:0,4,23	1/1:5,0:4:2.80:13,3,0	1/1:2,1:2:5.96:44,6,0	1/1:4,0:4:1.22:3,1,0	0/0:6,0:6:3.54:0,4,20	0/0:6,0:6:12.02:0,12,127	0/1:12,0:12:7.12:7,0,20	0/1:13,0:13:4.68:5,0,46	0/1:17,0:13:0.47:22,0,0
chr10	11722932	.	TTGGGG	T	78.16	PASS	AB=0.951;AC=11;AF=0.196;AN=56;BaseQRankSum=2.885;DP=565;FS=21.226;HRun=0;HaplotypeScore=107.4720;InbreedingCoeff=0.1964;MQ=29.25;MQ0=69;MQRankSum=-0.532;QD=0.89;ReadPosRankSum=0.317;VQSLOD=0.4457;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:16,0:13:19.82:20,0,128	0/0:7,0:6:15.05:0,15,263	0/0:161,0:14:22.36:0,22,531	0/0:158,0:14:14.65:0,15,431	0/0:6,0:6:14.80:0,15,176	1/1:10,0:8:5.67:28,6,0	0/1:3,0:3:17.23:17,0,20	0/0:19,0:15:32.47:0,32,571	0/0:7,1:6:14.96:0,15,253	0/0:13,0:13:17.40:0,17,197	0/0:9,0:8:16.49:0,16,253	1/1:2,0:3:0.03:4,0,0	0/0:2,0:2:2.49:0,2,5	0/0:5,0:3:4.19:0,4,20	0/0:5,0:5:15.05:0,15,254	0/0:8,0:8:20.84:0,21,217	0/1:13,1:13:30:30,0,348	0/1:10,1:9:34.41:34,0,364	0/0:16,0:9:6.02:0,6,69	0/0:6,0:6:15.05:0,15,218	1/1:7,0:6:3.48:53,3,0	0/0:2,0:2:2.92:0,3,9	0/0:5,0:5:11.61:0,12,88	0/0:6,0:7:8.78:0,9,125	0/0:7,0:7:12.04:0,12,360	0/0:19,0:19:40.37:0,40,603	0/0:13,0:13:25.84:0,26,548	0/1:22,1:16:27.25:27,0,533
chr10	11722933	.	TGG	T	904.07	PASS	AB=0.969;AC=40;AF=0.714;AN=56;BaseQRankSum=6.959;DP=573;FS=24.671;HRun=7;HaplotypeScore=93.3528;InbreedingCoeff=0.0474;MQ=29.12;MQ0=73;MQRankSum=-2.055;QD=2.31;ReadPosRankSum=2.729;VQSLOD=-0.7472;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:16,1:13:11.85:102,12,0	1/1:6,0:6:5.62:26,6,0	0/1:153,4:14:6.73:7,0,194	0/0:155,2:13:16.51:0,17,175	1/1:6,0:6:11.83:63,12,0	1/1:10,0:8:4.12:18,4,0	1/1:2,0:3:6.39:23,6,0	0/1:20,0:16:2.87:3,0,24	0/1:8,0:6:14.26:14,0,23	0/1:13,0:13:17.99:24,0,18	0/1:9,1:8:15.27:15,0,22	1/1:3,0:3:8.21:57,8,0	1/1:2,0:2:6:51,6,0	1/1:5,0:3:5.22:32,5,0	1/1:5,0:5:1.38:35,1,0	1/1:8,0:8:13.21:72,13,0	1/1:14,0:13:20.16:82,20,0	0/1:11,0:9:5.56:36,0,6	0/0:16,0:9:1.55:0,2,4	1/1:6,0:6:7.42:26,7,0	1/1:8,0:7:3.46:26,3,0	1/1:4,0:2:5.99:49,6,0	1/1:5,0:5:10.28:60,10,0	0/1:7,0:7:0.47:5,0,0	0/0:7,0:7:12.02:0,12,155	0/1:19,0:20:36.95:37,0,37	0/1:13,1:14:27.61:102,0,28	0/1:25,0:17:16.22:95,0,16
chr10	11722939	.	GGTTTTTTT	G	5106.55	PASS	AB=0.821;AC=32;AF=0.571;AN=56;BaseQRankSum=-0.612;DP=561;FS=4.520;HRun=0;HaplotypeScore=90.9784;InbreedingCoeff=0.3414;MQ=24.42;MQ0=77;MQRankSum=1.345;QD=22.70;ReadPosRankSum=2.704;VQSLOD=4.0036;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:12,2:10:30.30:207,0,30	1/1:2,1:5:14.91:203,15,0	0/0:153,0:12:12.86:0,13,217	0/0:151,0:10:15.96:0,16,153	1/1:4,4:8:12.68:306,13,0	0/1:10,0:9:0.90:1,0,7	0/0:4,0:4:5.43:0,5,96	0/1:12,0:13:48.76:160,0,49	1/1:6,2:6:14.82:250,15,0	0/1:11,1:12:41.41:250,0,41	0/1:8,3:8:47.52:166,0,48	0/0:1,0:3:9:0,9,82	0/0:0,0:2:6.02:0,6,68	0/0:3,0:3:6.01:0,6,61	1/1:2,1:5:15.02:238,15,0	1/1:4,3:7:17.84:274,18,0	1/1:6,8:13:32.09:527,32,0	1/1:9,3:9:8.98:317,9,0	1/1:13,0:9:2:9,2,0	0/1:3,0:7:3.90:102,0,4	0/0:9,0:7:5.98:0,6,58	0/1:3,0:2:8.39:8,0,18	1/1:3,3:6:11.92:299,12,0	1/1:3,1:5:5.83:94,6,0	0/0:6,0:6:12.01:0,12,196	0/1:19,3:22:69.95:558,0,70	1/1:10,1:13:23.37:363,23,0	1/1:15,6:17:29.26:775,29,0
chr10	11722984	.	TCCC	T	992.71	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-2.147;DP=318;FS=3.120;HRun=16;HaplotypeScore=71.7218;InbreedingCoeff=0.3507;MQ=61.90;MQ0=9;MQRankSum=-1.203;QD=6.53;ReadPosRankSum=2.094;VQSLOD=-0.7439;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,3:14:5.38:63,5,0	0/0:5,0:5:0:0,0,0	0/0:74,0:15:8.08:0,8,82	0/0:76,2:22:8.70:0,9,97	1/1:6,1:7:5.94:60,6,0	1/1:5,2:6:2.88:30,3,0	1/1:3,0:5:5.72:35,6,0	1/1:6,0:6:2.83:18,3,0	0/0:3,0:3:0:0,0,0	1/1:2,3:5:8.88:82,9,0	1/1:4,0:4:5.88:50,6,0	1/1:4,0:12:20.49:122,20,0	1/1:1,0:5:11.75:70,12,0	1/1:2,0:3:2.91:17,3,0	1/1:2,1:3:2.94:32,3,0	1/1:1,0:2:2.90:18,3,0	1/1:13,2:15:5.59:64,6,0	1/1:5,1:6:2.76:19,3,0	1/1:2,0:2:3.81:19,4,0	1/1:5,0:6:2.87:18,3,0	1/1:4,0:6:5.82:34,6,0	1/1:0,0:1:2.94:18,3,0	1/1:5,0:6:5.79:46,6,0	1/1:3,4:9:6.41:65,6,0	0/0:2,0:2:5.75:0,6,48	1/1:2,1:5:4.52:61,5,0	1/1:12,0:12:8.69:94,9,0	1/1:5,2:8:7.39:79,7,0
chr10	11723027	.	GA	G	1070.02	PASS	AC=8;AF=0.148;AN=54;BaseQRankSum=2.479;DP=219;FS=12.457;HRun=4;HaplotypeScore=34.9536;InbreedingCoeff=0.8280;MQ=82.50;MQ0=0;MQRankSum=-0.015;QD=29.72;ReadPosRankSum=-0.713;VQSLOD=1.8120;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:7:18.06:0,18,252	./.	0/0:10,0:7:19.88:0,20,257	0/0:17,0:11:26.84:0,27,328	0/0:9,0:9:24.08:0,24,336	0/0:8,0:8:21.07:0,21,294	0/0:7,0:7:21.07:0,21,294	1/1:0,16:15:45.14:540,45,0	0/0:2,0:2:6.02:0,6,84	0/0:11,0:11:30.09:0,30,406	0/0:5,0:5:12.03:0,12,151	0/0:9,0:9:24.08:0,24,335	0/0:7,0:7:18.05:0,18,235	0/0:3,0:3:9.03:0,9,126	0/0:6,0:6:18.03:0,18,231	0/0:3,0:3:6.02:0,6,84	0/0:15,0:15:42.03:0,42,524	0/0:11,0:11:30.10:0,30,419	1/1:0,5:5:15.05:180,15,0	1/1:0,5:5:15.05:180,15,0	1/1:0,10:10:27.08:324,27,0	0/0:3,0:3:6.02:0,6,82	0/0:6,0:6:15.05:0,15,210	0/0:8,0:8:17.98:0,18,209	0/0:1,0:1:3.01:0,3,42	0/0:15,0:15:42.13:0,42,572	0/0:14,0:14:42.14:0,42,587	0/0:6,0:6:18.06:0,18,252
chr10	11723167	.	G	GTC	9785.27	PASS	AB=0.556;AC=34;AF=0.607;AN=56;BaseQRankSum=-9.746;DP=407;FS=2.186;HRun=0;HaplotypeScore=49.8074;InbreedingCoeff=0.6182;MQ=74.59;MQ0=6;MQRankSum=0.730;QD=34.33;ReadPosRankSum=2.804;VQSLOD=6.6954;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,18:22:42.14:664,42,0	1/1:1,1:1:3.01:49,3,0	0/0:18,0:14:22.57:0,23,203	0/0:25,0:18:0.04:0,0,115	1/1:1,4:5:9.03:147,9,0	0/0:17,0:17:45.12:0,45,531	0/0:10,0:10:18.06:0,18,221	1/1:5,21:27:69.17:1014,69,0	1/1:2,11:13:8.24:418,8,0	1/1:1,8:8:24.07:367,24,0	0/1:3,8:11:43.70:348,0,44	0/0:15,0:15:45.07:0,45,520	0/0:10,0:10:27.08:0,27,332	0/0:12,0:12:30.08:0,30,355	0/1:2,15:16:0.81:502,0,1	1/1:1,10:11:30.10:489,30,0	1/1:4,16:20:48.16:769,48,0	1/1:1,28:28:75.24:1191,75,0	1/1:3,15:18:45.13:675,45,0	1/1:2,12:14:2.22:518,2,0	1/1:3,10:13:13.22:444,13,0	0/0:6,0:6:18.06:0,18,221	0/1:2,7:9:18.85:225,0,19	1/1:2,9:11:21.07:337,21,0	0/0:9,0:9:24.07:0,24,295	0/1:2,9:10:43.74:361,0,44	1/1:6,22:26:17.29:779,17,0	1/1:1,14:15:30.10:489,30,0
chr10	11724309	.	AC	A	3928.69	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=10.152;DP=613;FS=1.753;HRun=3;HaplotypeScore=61.2656;InbreedingCoeff=0.9942;MQ=82.32;MQ0=0;MQRankSum=-2.373;QD=33.87;ReadPosRankSum=-1.520;VQSLOD=3.5215;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,105,1506	0/0:5,0:5:15.05:0,15,216	0/0:22,0:22:61.72:0,62,822	0/0:17,0:17:48.16:0,48,676	0/0:21,0:21:63.21:0,63,906	0/0:27,0:27:78.25:0,78,1104	0/0:22,0:22:66.21:0,66,933	1/1:4,26:30:78.24:967,78,0	0/0:16,0:16:48.16:0,48,690	0/0:12,0:12:33.09:0,33,455	0/0:15,0:15:45.15:0,45,647	0/0:29,0:29:87.27:0,87,1217	0/0:26,0:26:78.21:0,78,1062	0/0:25,0:25:72.24:0,72,1036	0/0:28,0:28:81.23:0,81,1112	0/0:24,0:24:66.22:0,66,950	0/0:24,0:24:72.24:0,72,1037	0/0:27,0:27:78.25:0,78,1100	1/1:1,21:22:63.18:768,63,0	1/1:0,10:10:30.09:372,30,0	1/1:2,52:54:99:1822,147,0	0/0:8,0:8:24.08:0,24,346	0/0:9,0:9:24.08:0,24,346	0/0:27,0:27:75.25:0,75,1079	0/0:20,0:20:60.20:0,60,863	0/0:22,0:22:63.21:0,63,902	0/0:22,0:22:63.20:0,63,889	0/0:13,0:13:39.13:0,39,559
chr10	11724746	.	CT	C	4844.55	PASS	AB=0.595;AC=45;AF=0.804;AN=56;BaseQRankSum=-0.953;DP=491;FS=2.075;HRun=14;HaplotypeScore=61.5306;InbreedingCoeff=0.3851;MQ=85.83;MQ0=3;MQRankSum=-0.490;QD=11.48;ReadPosRankSum=4.040;VQSLOD=4.7985;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,17:24:37.72:253,38,0	1/1:1,8:9:23.81:164,24,0	0/0:25,0:20:16.81:0,17,217	0/0:30,0:22:17.67:0,18,109	1/1:3,10:15:30.82:197,31,0	1/1:4,18:23:18.90:266,19,0	1/1:0,9:10:22.87:150,23,0	1/1:14,28:43:63.73:517,64,0	0/1:5,10:15:7.01:170,0,7	1/1:6,16:22:44.17:293,44,0	1/1:3,12:15:4.72:169,5,0	1/1:3,18:22:42.68:279,43,0	1/1:5,13:18:1.91:157,2,0	1/1:4,13:18:12.82:224,13,0	0/1:4,7:11:6.99:102,0,7	1/1:2,4:8:13.92:88,14,0	0/1:6,14:22:9.94:213,0,10	1/1:4,15:20:30.32:295,30,0	1/1:4,6:10:17.79:123,18,0	0/1:6,7:13:25.20:93,0,25	1/1:2,11:13:20.79:144,21,0	1/1:5,12:17:5.74:151,6,0	1/1:1,7:10:15.96:94,16,0	1/1:2,8:11:25.83:170,26,0	0/0:9,0:11:23.83:0,24,202	1/1:3,8:11:20.78:144,21,0	1/1:7,12:18:20.78:144,21,0	0/1:3,18:23:20.34:245,0,20
chr10	11727012	.	A	AT	7140.97	PASS	AB=0.672;AC=39;AF=0.696;AN=56;BaseQRankSum=-3.054;DP=693;FS=7.946;HRun=12;HaplotypeScore=97.7718;InbreedingCoeff=0.5051;MQ=73.04;MQ0=2;MQRankSum=-1.746;QD=13.13;ReadPosRankSum=2.992;VQSLOD=4.6476;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:10,36:47:42.64:752,43,0	1/1:1,9:10:13:168,13,0	0/1:19,1:17:29.70:30,0,97	0/0:26,0:20:23.68:0,24,168	1/1:10,22:33:9.28:413,9,0	1/1:2,19:21:36.06:349,36,0	1/1:14,13:28:22.46:406,22,0	0/0:31,0:32:4.82:0,5,276	1/1:7,19:26:7.26:393,7,0	1/1:12,17:32:18.44:464,18,0	0/1:9,11:20:10.72:229,0,11	1/1:15,0:15:4.34:57,4,0	1/1:7,0:30:30.85:149,31,0	1/1:6,0:17:19.92:101,20,0	0/1:11,18:29:24.92:253,0,25	1/1:9,13:23:14.02:285,14,0	1/1:7,18:25:66.02:616,66,0	0/1:9,18:27:8.46:410,0,8	0/0:21,3:27:5.55:0,6,277	0/0:20,1:21:15.52:0,16,277	0/0:21,0:22:40.77:0,41,288	1/1:18,0:23:32.59:166,33,0	1/1:9,10:19:21.14:314,21,0	1/1:9,22:31:4.87:456,5,0	0/0:19,1:21:11.36:0,11,230	1/1:9,19:28:35.15:491,35,0	1/1:3,20:24:31.08:484,31,0	0/1:2,11:13:0.54:154,0,1
chr10	11729685	.	TC	T	5936.58	PASS	AB=0.758;AC=48;AF=0.889;AN=54;BaseQRankSum=-0.252;DP=416;FS=0.000;HRun=2;HaplotypeScore=44.2929;InbreedingCoeff=0.4333;MQ=47.06;MQ0=27;MQRankSum=0.010;QD=16.77;ReadPosRankSum=-1.687;VQSLOD=4.1597;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,13:16:32.86:342,33,0	1/1:4,0:4:3:26,3,0	0/0:41,2:10:2.13:0,2,130	0/1:50,2:8:6.99:7,0,71	1/1:2,14:16:29.68:279,30,0	1/1:2,10:11:12:134,12,0	1/1:1,9:8:11.98:131,12,0	1/1:3,22:23:62.97:716,63,0	1/1:2,8:7:6.02:77,6,0	1/1:0,12:10:26.91:309,27,0	1/1:2,5:6:12.04:152,12,0	1/1:8,8:16:33.07:370,33,0	1/1:0,12:11:15.05:192,15,0	1/1:2,4:6:11.93:130,12,0	1/1:1,12:13:20.96:262,21,0	1/1:4,5:9:18.06:225,18,0	1/1:13,19:28:27.31:776,27,0	1/1:8,7:13:22.08:313,22,0	1/1:4,5:7:12.03:139,12,0	1/1:2,6:7:14.99:172,15,0	0/1:2,5:6:32.63:68,0,33	1/1:1,10:10:17.90:168,18,0	./.	1/1:0,7:5:8.96:94,9,0	0/0:13,0:12:30.08:0,30,384	1/1:1,16:17:44.89:479,45,0	1/1:1,8:9:24.08:299,24,0	1/1:6,8:9:6.02:75,6,0
chr10	11729923	.	T	TC	2368.80	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=-4.647;DP=690;FS=2.086;HRun=6;HaplotypeScore=70.9272;InbreedingCoeff=0.8893;MQ=75.24;MQ0=1;MQRankSum=0.595;QD=21.73;ReadPosRankSum=1.096;VQSLOD=2.9964;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,132,1299	0/0:15,0:15:41.92:0,42,398	0/1:12,0:11:6.42:6,0,100	0/0:21,1:21:21.97:0,22,224	0/0:28,0:28:74.26:0,74,760	0/0:26,0:26:69.10:0,69,686	0/0:31,0:31:84.18:0,84,854	0/0:30,0:30:72.07:0,72,690	0/0:28,0:28:81.13:0,81,813	0/0:28,0:28:68.80:0,69,669	0/0:16,0:16:45.07:0,45,443	1/1:6,30:36:57.17:692,57,0	1/1:0,15:15:42.13:522,42,0	1/1:5,27:32:72.23:893,72,0	0/0:28,0:28:69.14:0,69,698	0/0:29,0:29:78.15:0,78,782	0/0:29,0:29:81.03:0,81,769	0/0:24,0:24:63.13:0,63,641	0/0:14,0:14:36.08:0,36,366	0/0:15,0:15:41.76:0,42,406	0/0:38,0:38:99:0,99,999	1/1:2,12:14:36.02:419,36,0	0/0:16,0:16:30.05:0,30,299	0/0:22,0:22:66.10:0,66,655	0/0:19,0:19:45.85:0,46,461	0/0:27,0:27:63.12:0,63,635	0/0:22,0:22:51.11:0,51,518	0/0:24,0:24:57.12:0,57,578
chr10	11730036	.	A	AGCCT	6412.76	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-5.417;DP=743;FS=2.521;HRun=0;HaplotypeScore=170.8920;InbreedingCoeff=0.9952;MQ=85.86;MQ0=0;MQRankSum=-9.950;QD=63.49;ReadPosRankSum=-5.394;VQSLOD=4.7494;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,157,2926	0/0:5,0:5:15.03:0,15,247	0/0:38,0:38:98.22:0,98,1808	0/0:27,0:27:69.13:0,69,1201	0/0:40,0:40:99:0,114,2156	0/0:29,0:29:84.29:0,84,1613	0/0:21,0:21:60.20:0,60,1107	1/1:3,23:30:87.25:2053,87,0	0/0:29,0:29:87.30:0,87,1670	0/0:24,0:23:66.18:0,66,1182	0/0:11,0:10:27.08:0,27,468	0/0:22,0:22:60.19:0,60,1121	0/0:31,0:31:87.30:0,87,1672	0/0:29,0:29:87.13:0,87,1607	0/0:36,0:36:99:0,108,2021	0/0:34,0:34:99:0,99,1887	0/0:26,0:26:78.25:0,78,1456	0/0:12,0:12:36.11:0,36,664	1/1:1,22:23:69.22:1743,69,0	1/1:2,19:24:60.12:1470,60,0	1/1:4,17:24:42.14:1146,42,0	0/0:31,0:31:78.10:0,78,1449	0/0:23,0:23:60.19:0,60,1121	0/0:25,0:25:75.22:0,75,1385	0/0:21,0:21:54.17:0,54,1009	0/0:28,0:28:84.29:0,84,1628	0/0:29,0:28:81.24:0,81,1458	0/0:19,0:17:48.09:0,48,780
chr10	11731510	.	C	CCTTT	19189.03	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=0.692;DP=613;FS=6.214;HRun=0;HaplotypeScore=127.2416;InbreedingCoeff=0.8450;MQ=55.32;MQ0=7;MQRankSum=-0.382;QD=35.21;ReadPosRankSum=0.605;VQSLOD=4.7601;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,8:26:44.99:855,45,0	1/1:3,4:7:18.06:436,18,0	0/0:17,0:7:5.75:0,6,51	0/0:30,0:8:5.75:0,6,43	1/1:18,9:26:63.18:1180,63,0	1/1:13,7:20:48.15:999,48,0	1/1:16,4:19:29.86:473,30,0	1/1:36,0:36:54.77:559,55,0	1/1:22,10:32:72.22:1529,72,0	1/1:17,8:25:57.19:1224,57,0	1/1:13,7:18:39.12:783,39,0	1/1:15,0:16:38.56:411,39,0	1/1:11,1:12:24.04:386,24,0	1/1:20,0:22:35.91:394,36,0	1/1:15,12:26:48.16:1074,48,0	1/1:15,5:20:42.12:841,42,0	1/1:16,8:24:50.50:986,51,0	1/1:7,5:11:26.98:463,27,0	1/1:10,3:24:47.96:581,48,0	1/1:21,1:25:48.03:631,48,0	1/1:8,0:7:3.01:43,3,0	1/1:18,0:18:12.82:222,13,0	1/1:13,4:17:29.99:485,30,0	1/1:10,5:15:41.89:673,42,0	0/0:19,0:19:39.10:0,39,585	1/1:24,10:34:72.22:1508,72,0	1/1:29,8:38:93.25:1772,93,0	1/1:10,7:15:30.09:679,30,0
chr10	11731531	.	C	CTT	6031.20	PASS	AB=0.992;AC=27;AF=0.482;AN=56;BaseQRankSum=4.501;DP=677;FS=6.968;HRun=3;HaplotypeScore=161.6172;InbreedingCoeff=-0.7819;MQ=55.33;MQ0=13;MQRankSum=1.267;QD=9.90;ReadPosRankSum=6.234;VQSLOD=1.4088;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:27:99:279,0,203	0/1:11,0:11:99:212,0,105	0/0:47,0:10:21.01:0,21,199	0/1:52,0:10:15.68:16,0,58	0/1:28,1:28:99:306,0,167	0/1:18,0:18:55.90:315,0,56	0/1:14,0:14:99:139,0,99	0/1:43,0:43:76.12:76,0,687	0/1:31,0:31:99:470,0,148	0/1:30,0:30:99:480,0,194	1/1:18,0:15:13.88:362,14,0	0/1:18,0:18:62.33:62,0,131	0/1:12,1:13:99:132,0,100	0/1:17,0:17:43.33:43,0,147	0/1:24,0:23:99:341,0,177	0/1:19,0:19:99:207,0,107	0/1:26,1:27:99:284,0,164	0/1:14,0:13:62.27:193,0,62	0/1:26,0:24:62.35:62,0,342	0/1:26,0:26:47.99:48,0,283	0/1:7,0:6:8.75:9,0,31	0/1:18,0:18:36.24:36,0,239	0/1:18,0:18:99:142,0,299	0/1:17,0:17:45.69:225,0,46	0/0:20,0:21:57.65:0,58,843	0/1:37,0:37:99:501,0,306	0/1:39,0:39:99:802,0,153	0/1:14,1:13:93.48:287,0,93
chr10	11731538	.	T	TC	901.73	PASS	AB=0.910;AC=13;AF=0.232;AN=56;BaseQRankSum=3.463;DP=680;FS=8.876;HRun=0;HaplotypeScore=166.2917;InbreedingCoeff=-0.3395;MQ=56.73;MQ0=11;MQRankSum=-4.204;QD=3.54;ReadPosRankSum=-4.805;VQSLOD=1.5748;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:52.46:0,52,556	0/1:11,0:11:24.52:25,0,126	0/0:54,0:11:10.79:0,11,220	0/0:56,0:12:8.15:0,8,124	0/0:27,0:26:26.26:0,26,622	0/1:17,0:17:40.68:41,0,211	0/0:13,0:13:6.73:0,7,161	0/1:28,7:35:99:205,0,787	0/0:34,0:34:0.46:0,0,551	0/0:27,0:27:2.52:0,3,585	0/1:16,0:13:22.90:23,0,161	0/1:13,4:17:99:209,0,171	0/1:15,0:15:5.39:5,0,158	0/1:12,2:14:91.45:91,0,264	0/0:28,0:27:39.43:0,39,516	0/0:20,0:20:12.01:0,12,459	0/0:29,0:29:51.29:0,51,585	0/0:13,0:12:6.15:0,6,277	0/1:25,0:25:99:118,0,490	0/1:27,5:32:99:110,0,535	0/1:4,3:6:32.89:33,0,52	0/1:12,6:18:99:159,0,278	0/0:21,0:21:27.81:0,28,480	0/0:15,0:15:35.65:0,36,393	0/0:23,0:23:66.16:0,66,893	0/0:35,0:35:20.48:0,20,754	0/1:32,0:32:14.43:14,0,551	0/1:16,0:14:16.16:16,0,187
chr10	11731542	.	CTT	C	5599.53	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-0.416;DP=676;FS=0.809;HRun=14;HaplotypeScore=155.6482;InbreedingCoeff=0.8783;MQ=57.85;MQ0=11;MQRankSum=5.123;QD=15.09;ReadPosRankSum=5.995;VQSLOD=2.3296;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,24:28:52.83:446,53,0	1/1:1,9:10:21.02:193,21,0	0/0:57,0:12:12.71:0,13,96	0/0:56,1:14:6.90:0,7,50	1/1:12,13:26:3.81:363,4,0	1/1:4,1:17:15.46:127,15,0	1/1:4,0:13:10.39:54,10,0	0/0:16,0:35:54.56:0,55,484	1/1:10,21:31:55.02:475,55,0	1/1:9,15:24:35.09:447,35,0	1/1:7,11:15:4.95:160,5,0	0/0:12,0:18:31.39:0,31,286	0/0:3,0:14:20.97:0,21,196	0/0:7,0:13:32.97:0,33,324	1/1:6,20:28:12.91:344,13,0	1/1:4,16:20:36:333,36,0	1/1:7,23:30:53.74:477,54,0	1/1:3,10:12:30.02:276,30,0	0/0:22,0:26:41.62:0,42,394	0/0:14,0:34:74.21:0,74,671	0/0:3,0:6:5.72:0,6,40	0/0:10,0:18:31.43:0,31,287	1/1:2,18:20:35.92:333,36,0	1/1:3,11:14:30:277,30,0	0/0:22,0:24:38.69:0,39,762	1/1:11,20:32:64.70:565,65,0	1/1:3,25:30:59.39:573,59,0	1/1:6,8:12:0.07:156,0,0
chr10	11732496	.	ATCAGTCAG	A	4516.98	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=11.834;DP=698;FS=6.874;HRun=0;HaplotypeScore=167.1073;InbreedingCoeff=0.9114;MQ=80.17;MQ0=0;MQRankSum=-3.853;QD=25.23;ReadPosRankSum=-2.010;VQSLOD=3.6934;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,154,5655	0/0:9,0:9:27.09:0,27,932	0/0:20,0:20:46.19:0,46,1440	0/0:34,0:34:52.24:0,52,1389	0/0:25,0:25:69.19:0,69,2237	0/0:17,0:17:51.16:0,51,1528	0/0:33,0:33:87.28:0,87,3194	1/1:3,31:33:93.18:1835,93,0	0/0:24,0:24:66.23:0,66,2566	0/0:20,0:20:60.21:0,60,2323	0/0:19,0:19:54.17:0,54,1952	1/1:2,22:24:9.03:240,9,0	1/1:2,12:13:8.67:246,9,0	1/1:2,14:15:6.02:164,6,0	0/0:34,0:34:99:0,99,3586	0/0:26,0:26:57.17:0,57,2010	0/0:37,0:37:99:0,99,3511	0/0:32,0:32:84.29:0,84,3094	1/1:4,21:25:63.09:1338,63,0	1/1:2,17:19:26.96:536,27,0	1/1:3,31:34:3.01:58,3,0	1/1:1,12:13:5.95:100,6,0	0/0:17,0:17:51.15:0,51,1798	0/0:32,0:32:90.31:0,90,3517	0/0:14,0:14:39.11:0,39,1296	0/0:28,0:28:75.21:0,75,2417	0/0:35,0:35:90.19:0,90,2721	0/0:9,0:9:24.08:0,24,946
chr10	11733340	.	CGTGTGTGTGTGT	C	207.91	PASS	AC=4;AF=0.077;AN=52;BaseQRankSum=4.740;DP=696;FS=0.000;HRun=0;HaplotypeScore=206.8334;InbreedingCoeff=0.7507;MQ=51.84;MQ0=24;MQRankSum=-4.432;QD=5.07;ReadPosRankSum=-2.570;VQSLOD=1.7204;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:41:26.96:0,27,1034	0/0:18,0:18:27.56:0,28,1078	./.	./.	0/0:25,0:25:21.07:0,21,996	1/1:6,9:14:7.27:207,7,0	1/1:21,4:25:3.01:98,3,0	0/0:12,0:16:30.07:0,30,512	0/0:25,0:24:24.07:0,24,908	0/0:24,0:23:36.07:0,36,1442	0/0:17,0:17:24.08:0,24,1053	0/0:30,0:30:54.60:0,55,1383	0/0:24,0:24:28.71:0,29,764	0/0:26,0:25:11.21:0,11,661	0/0:33,0:33:33.98:0,34,1317	0/0:25,0:25:39.59:0,40,1743	0/0:25,0:24:27.08:0,27,1121	0/0:18,0:17:33.08:0,33,1166	0/0:19,0:21:29.08:0,29,558	0/0:9,0:13:6.02:0,6,200	0/0:45,0:44:32.47:0,32,593	0/0:29,0:28:30.09:0,30,872	0/0:19,0:19:27.09:0,27,1208	0/0:43,0:43:72.23:0,72,3063	0/0:14,0:13:9.03:0,9,359	0/0:32,0:32:39.13:0,39,1193	0/0:22,0:22:31.32:0,31,1041	0/0:12,0:12:34.82:0,35,923
chr10	11733376	.	TGTGAGAGAGAGAGA	T	2230.62	PASS	AB=0.992;AC=17;AF=0.340;AN=50;BaseQRankSum=6.554;DP=615;FS=10.467;HRun=0;HaplotypeScore=187.3580;InbreedingCoeff=-0.3481;MQ=47.31;MQ0=26;MQRankSum=0.298;QD=5.63;ReadPosRankSum=-1.951;VQSLOD=1.2924;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:38,0:36:2.66:3,0,157	0/1:19,0:19:23.31:23,0,137	./.	./.	0/0:39,0:39:22.20:0,22,194	0/1:19,0:18:6.34:6,0,413	0/1:23,0:21:23.90:24,0,157	0/1:20,0:19:47.70:48,0,720	0/0:16,8:24:13.44:0,13,128	0/1:19,0:17:99:256,0,212	0/0:17,0:17:17.82:0,18,139	1/1:34,0:34:33.16:261,33,0	0/1:25,0:26:99:246,0,149	0/1:24,0:23:74.14:119,0,74	0/1:26,0:25:99:125,0,142	0/0:28,0:27:33.14:0,33,331	0/0:17,0:16:23.96:0,24,303	0/0:22,0:20:7.45:0,7,262	0/1:10,0:10:36.45:36,0,493	./.	0/1:34,0:29:84.67:85,0,709	0/1:28,0:27:14.39:97,0,14	0/0:19,0:18:2.78:0,3,107	0/1:42,0:42:99:370,0,509	0/0:19,0:17:4.80:0,5,665	0/1:22,0:20:88.67:504,0,89	0/0:24,0:23:14.43:0,14,128	0/1:10,0:10:39.29:178,0,39
chr10	11733378	.	TGAGAGAGAGAGA	T	1680.45	PASS	AB=0.905;AC=14;AF=0.280;AN=50;BaseQRankSum=2.772;DP=631;FS=29.733;HRun=0;HaplotypeScore=180.4401;InbreedingCoeff=0.2019;MQ=46.83;MQ0=25;MQRankSum=1.052;QD=6.49;ReadPosRankSum=-0.385;VQSLOD=0.9455;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,11:39:4.13:0,4,27	0/0:14,0:18:6.85:0,7,51	./.	./.	0/0:32,5:39:4.41:0,4,26	0/0:20,0:19:21.54:0,22,583	0/1:23,0:22:11.86:12,0,160	0/0:23,0:22:25.79:0,26,859	0/0:23,0:23:2.96:0,3,21	0/1:19,0:17:52.07:251,0,52	0/0:11,0:17:0:0,0,1	1/1:22,0:34:3.08:36,3,0	0/1:26,0:26:99:167,0,116	0/1:25,0:24:13.98:14,0,88	1/1:23,1:25:2.71:100,3,0	0/0:18,11:28:2.89:0,3,23	0/0:13,5:17:6:0,6,103	0/0:15,0:21:3.01:0,3,116	0/0:15,0:15:22.12:0,22,602	./.	0/0:34,0:29:19.30:0,19,741	0/1:22,0:28:0:0,0,1	0/0:11,6:16:0:0,0,0	1/1:41,0:42:23.61:534,24,0	0/0:18,0:16:27:0,27,551	0/1:13,1:20:12.72:507,0,13	0/0:18,0:23:3.85:0,4,22	1/1:6,4:11:6.36:199,6,0
chr10	11736282	.	AG	A	1667.98	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.184;DP=780;FS=1.192;HRun=2;HaplotypeScore=70.4384;InbreedingCoeff=0.9999;MQ=89.12;MQ0=0;MQRankSum=-2.789;QD=30.33;ReadPosRankSum=1.606;VQSLOD=3.3161;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:84.26:0,84,1232	0/0:16,0:16:48.16:0,48,712	0/0:19,0:19:57.14:0,57,796	0/0:37,0:37:99:0,105,1455	0/0:12,0:12:36.04:0,36,493	1/1:0,26:26:66.21:855,66,0	1/1:3,26:29:72.23:934,72,0	0/0:27,0:27:78.26:0,78,1169	0/0:31,0:31:93.30:0,93,1372	0/0:17,0:17:51.16:0,51,746	0/0:15,0:15:45.13:0,45,635	0/0:47,0:47:99:0,138,1965	0/0:45,0:45:99:0,132,1953	0/0:42,0:42:99:0,126,1796	0/0:44,0:44:99:0,129,1765	0/0:31,0:31:93.30:0,93,1356	0/0:30,0:30:87.29:0,87,1303	0/0:38,0:38:99:0,114,1611	0/0:15,0:15:42.10:0,42,568	0/0:16,0:16:47.90:0,48,684	0/0:67,0:67:99:0,202,2861	0/0:22,0:22:63.20:0,63,920	0/0:20,0:20:60.20:0,60,898	0/0:29,0:29:87.25:0,87,1275	0/0:18,0:18:54.17:0,54,788	0/0:24,0:24:69.22:0,69,1013	0/0:22,0:22:63.18:0,63,901	0/0:13,0:13:39.10:0,39,542
chr10	11737618	.	TG	T	10106.30	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=15.211;DP=820;FS=5.402;HRun=2;HaplotypeScore=77.7324;InbreedingCoeff=0.9998;MQ=85.30;MQ0=0;MQRankSum=-2.333;QD=35.46;ReadPosRankSum=0.409;VQSLOD=5.2941;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,132,1947	0/0:20,0:20:57.19:0,57,854	0/0:26,0:26:78.03:0,78,1095	0/0:24,0:24:63.68:0,64,917	0/0:20,0:20:60.18:0,60,857	0/0:18,0:18:51.17:0,51,763	0/0:26,0:26:78.26:0,78,1164	1/1:1,21:22:63.18:802,63,0	0/0:23,0:23:66.22:0,66,986	0/0:34,0:34:99:0,102,1445	0/0:24,0:24:66.21:0,66,967	1/1:1,29:30:75.24:973,75,0	1/1:1,42:43:99:1518,117,0	1/1:0,37:37:99:1285,99,0	0/0:45,0:45:99:0,126,1886	0/0:42,0:42:99:0,123,1762	0/0:24,0:24:69.22:0,69,1014	0/0:21,0:21:60.20:0,60,890	1/1:1,36:37:99:1401,108,0	1/1:0,33:33:99:1264,99,0	1/1:1,42:43:99:1479,114,0	1/1:0,40:40:99:1384,111,0	0/0:24,0:24:69.22:0,69,1014	0/0:23,0:23:69.22:0,69,1008	0/0:30,0:30:87.29:0,87,1302	0/0:30,0:30:90.29:0,90,1323	0/0:28,0:28:84.27:0,84,1238	0/0:9,0:9:27.09:0,27,404
chr10	11738735	.	C	CA	4904.95	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=14.549;DP=510;FS=4.614;HRun=0;HaplotypeScore=56.6613;InbreedingCoeff=0.9987;MQ=74.87;MQ0=0;MQRankSum=-2.368;QD=35.54;ReadPosRankSum=-2.799;VQSLOD=3.5331;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:81.27:0,81,1132	0/0:9,0:9:27.09:0,27,378	0/0:14,0:14:42.13:0,42,570	0/0:8,0:8:20.99:0,21,280	0/0:21,0:21:63.21:0,63,881	0/0:22,0:22:66.22:0,66,923	0/0:14,0:14:42.14:0,42,588	1/1:2,30:32:90.74:1210,91,0	0/0:13,0:13:39.13:0,39,546	0/0:23,0:23:69.23:0,69,962	0/0:13,0:13:39.13:0,39,544	1/1:1,16:17:42.12:563,42,0	1/1:0,13:13:33.11:450,33,0	1/1:2,14:16:42.14:572,42,0	0/0:21,0:21:63.21:0,63,881	0/0:23,0:23:69.22:0,69,950	0/0:31,0:31:93.27:0,93,1263	0/0:22,0:22:66.22:0,66,923	1/1:2,20:22:59.23:824,59,0	1/1:1,12:13:36.12:497,36,0	1/1:2,13:15:28.97:404,29,0	1/1:1,9:10:30.06:385,30,0	0/0:11,0:11:33.11:0,33,453	0/0:18,0:18:54.18:0,54,753	0/0:23,0:23:69.22:0,69,949	0/0:16,0:16:48.16:0,48,671	0/0:32,0:32:90.28:0,90,1239	0/0:10,0:10:30.10:0,30,420
chr10	11739635	.	C	CGT	7419.50	PASS	AB=0.600;AC=15;AF=0.268;AN=56;BaseQRankSum=-15.353;DP=708;FS=6.743;HRun=0;HaplotypeScore=78.7868;InbreedingCoeff=0.9112;MQ=63.25;MQ0=3;MQRankSum=-1.063;QD=34.35;ReadPosRankSum=-0.483;VQSLOD=6.6278;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,108,1314	0/0:12,0:13:38.94:0,39,455	0/0:24,0:19:51.16:0,51,642	0/0:20,0:19:50.82:0,51,595	0/0:15,0:15:39.12:0,39,491	0/0:16,0:16:42.13:0,42,530	0/0:30,0:30:87.19:0,87,1074	0/1:15,30:45:14.18:1394,0,14	0/0:22,0:22:57.18:0,57,718	0/0:40,0:40:99:0,105,1324	0/0:20,0:20:51.13:0,51,626	1/1:2,26:29:69.24:1140,69,0	1/1:4,28:35:43.48:1258,43,0	1/1:1,25:28:66.23:1093,66,0	0/0:27,0:27:66.21:0,66,832	0/0:24,0:25:60.02:0,60,733	0/0:20,0:20:57.14:0,57,700	0/0:23,0:24:32.37:0,32,544	1/1:8,16:24:45.15:742,45,0	1/1:0,9:10:21.07:349,21,0	1/1:4,26:29:63.22:1047,63,0	1/1:1,13:13:24.08:399,24,0	0/0:16,0:16:45.14:0,45,567	0/0:34,0:34:87.25:0,87,1070	0/0:24,0:24:57.18:0,57,718	0/0:31,0:31:75.23:0,75,934	0/0:31,0:31:75.24:0,75,939	0/0:17,0:17:48.15:0,48,604
chr10	11741822	.	T	TA	29490.83	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-9.906;DP=746;FS=11.274;HRun=0;HaplotypeScore=70.1533;InbreedingCoeff=0.9890;MQ=86.55;MQ0=0;MQRankSum=-11.313;QD=43.89;ReadPosRankSum=7.095;VQSLOD=3.8795;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,60:60:99:2732,172,0	1/1:0,4:4:12.04:192,12,0	0/0:36,0:36:99:0,102,1225	0/0:21,0:21:55.09:0,55,790	1/1:1,19:19:51.17:803,51,0	1/1:0,24:24:69.24:1103,69,0	1/1:0,29:29:81.28:1294,81,0	1/1:0,17:17:51.14:765,51,0	1/1:0,27:27:69.24:1103,69,0	1/1:0,35:35:99:1671,105,0	1/1:0,22:23:60:901,60,0	1/1:0,25:25:69.24:1103,69,0	1/1:0,37:37:99:1630,102,0	1/1:0,26:26:78.27:1247,78,0	1/1:0,31:31:84.29:1343,84,0	1/1:0,23:22:63.21:1007,63,0	1/1:0,32:32:87.30:1390,87,0	1/1:0,30:30:81.28:1295,81,0	1/1:3,19:22:63.18:956,63,0	1/1:1,27:28:72.18:1120,72,0	1/1:0,33:33:93.32:1486,93,0	1/1:0,23:23:63.13:964,63,0	1/1:1,21:22:60.12:928,60,0	1/1:0,48:48:99:2253,141,0	0/0:17,0:17:48.15:0,48,656	1/1:0,21:21:63.19:980,63,0	1/1:1,19:20:45.15:703,45,0	1/1:1,11:12:33.11:523,33,0
chr10	11745985	.	A	ATTTGTCTGTGC	2258.99	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-4.623;DP=618;FS=8.260;HRun=0;HaplotypeScore=195.6992;InbreedingCoeff=0.9463;MQ=81.43;MQ0=0;MQRankSum=-5.684;QD=57.92;ReadPosRankSum=-0.477;VQSLOD=2.6317;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,117,3627	0/0:7,0:7:18.06:0,18,594	0/0:16,0:16:9.27:0,9,819	0/0:20,0:21:21.35:0,21,1055	0/0:27,0:27:63.08:0,63,1823	1/1:3,12:20:33.07:1674,33,0	1/1:8,8:19:17.98:705,18,0	0/0:21,0:21:48.16:0,48,1339	0/0:22,0:22:63.22:0,63,2062	0/0:29,0:29:78.26:0,78,2296	0/0:11,0:11:27.08:0,27,831	0/0:16,0:16:45.14:0,45,1301	0/0:13,0:13:39.12:0,39,1200	0/0:12,0:12:30.10:0,30,956	0/0:19,0:19:51.16:0,51,1572	0/0:18,0:18:48.15:0,48,1374	0/0:29,0:29:72.23:0,72,2259	0/0:36,0:36:99:0,99,2904	0/0:15,0:15:33.06:0,33,1006	0/0:21,0:21:54.18:0,54,1665	0/0:55,0:55:99:0,156,4758	0/0:24,0:24:60.16:0,60,1752	0/0:21,0:21:48.14:0,48,1395	0/0:19,0:19:51.18:0,51,1707	0/0:27,0:27:78.27:0,78,2488	0/0:26,0:26:66.20:0,66,2019	0/0:22,0:22:54.19:0,54,1761	0/0:4,0:4:12.01:0,12,303
chr10	11746191	.	ATG	A	10304.70	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=12.437;DP=686;FS=0.316;HRun=0;HaplotypeScore=88.8492;InbreedingCoeff=0.9842;MQ=75.07;MQ0=0;MQRankSum=-1.037;QD=27.93;ReadPosRankSum=4.812;VQSLOD=5.9502;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,40:51:99:1238,99,0	1/1:0,3:3:6.02:75,6,0	0/0:33,0:29:45.17:0,45,702	0/0:28,0:26:48.12:0,48,697	1/1:3,19:22:54.01:605,54,0	0/0:25,0:25:54.12:0,54,825	0/0:18,0:18:42.06:0,42,637	0/0:43,0:43:84.29:0,84,1385	1/1:4,22:26:57.18:713,57,0	1/1:4,23:27:66.14:770,66,0	1/1:5,10:15:24.08:300,24,0	0/0:23,0:23:57.19:0,57,926	0/0:25,0:25:63.19:0,63,1014	0/0:18,0:18:51.14:0,51,792	1/1:4,28:32:78.25:976,78,0	1/1:5,33:38:87.28:1088,87,0	1/1:5,25:30:66.21:826,66,0	1/1:7,17:24:48.15:601,48,0	0/0:25,0:25:54.18:0,54,882	0/0:16,0:16:39.07:0,39,588	0/0:36,0:36:52.72:0,53,1360	0/0:15,0:15:45.05:0,45,679	1/1:2,8:10:18.06:225,18,0	1/1:3,24:27:66.21:826,66,0	0/0:12,0:12:30.10:0,30,491	1/1:4,21:26:68.96:771,69,0	1/1:3,22:26:69.05:840,69,0	1/1:0,12:12:36.11:450,36,0
chr10	11747261	.	GT	G	5830.65	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=15.397;DP=663;FS=1.033;HRun=5;HaplotypeScore=69.9345;InbreedingCoeff=0.9992;MQ=79.71;MQ0=0;MQRankSum=-1.864;QD=30.05;ReadPosRankSum=1.668;VQSLOD=5.5357;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:90.25:0,90,1178	0/0:12,0:12:33.11:0,33,451	0/0:17,0:17:51.15:0,51,668	0/0:15,0:15:42.14:0,42,557	0/0:18,0:18:51.17:0,51,697	0/0:13,0:13:39.13:0,39,530	0/0:33,0:33:93.31:0,93,1271	1/1:3,24:27:69.16:763,69,0	0/0:32,0:32:96.26:0,96,1275	0/0:17,0:17:48.16:0,48,657	0/0:17,0:17:51.16:0,51,683	1/1:1,26:27:75.21:851,75,0	1/1:1,20:21:57.16:646,57,0	1/1:0,28:28:84.24:953,84,0	0/0:31,0:31:81.27:0,81,1106	0/0:21,0:21:63.21:0,63,861	0/0:39,0:39:99:0,111,1502	0/0:34,0:34:99:0,99,1354	1/1:2,22:24:66.16:728,66,0	1/1:0,11:11:30.09:340,30,0	1/1:6,35:41:99:1156,102,0	1/1:2,13:15:36.06:394,36,0	0/0:22,0:22:60.18:0,60,794	0/0:35,0:35:99:0,105,1406	0/0:20,0:20:57.17:0,57,762	0/0:25,0:25:72.24:0,72,984	0/0:28,0:28:84.27:0,84,1133	0/0:9,0:9:21.07:0,21,287
chr10	11749306	.	G	GT	5826.32	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-6.393;DP=664;FS=2.396;HRun=6;HaplotypeScore=108.0980;InbreedingCoeff=0.9993;MQ=76.29;MQ0=0;MQRankSum=-0.541;QD=30.50;ReadPosRankSum=1.120;VQSLOD=4.4004;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,105,1032	0/0:9,0:9:21.05:0,21,214	0/0:26,0:26:58.63:0,59,555	0/0:24,0:22:42.64:0,43,414	0/0:21,0:21:57.13:0,57,581	0/0:24,0:24:63.09:0,63,626	0/0:20,0:20:45.06:0,45,444	1/1:4,27:31:78.25:981,78,0	0/0:21,0:21:57.11:0,57,569	0/0:23,0:23:65.50:0,66,643	0/0:18,0:18:48.11:0,48,489	1/1:3,21:25:59.98:727,60,0	1/1:4,19:23:54.02:665,54,0	1/1:4,30:34:75.24:944,75,0	0/0:32,0:32:87.18:0,87,878	0/0:28,0:28:81.15:0,81,811	0/0:31,0:31:93.13:0,93,914	0/0:20,0:20:51.05:0,51,496	1/1:1,21:22:63.20:792,63,0	1/1:2,15:17:36.11:450,36,0	1/1:2,22:24:63.20:792,63,0	1/1:2,13:15:39.10:475,39,0	0/0:21,0:21:60.13:0,60,606	0/0:28,0:28:78.08:0,78,763	0/0:16,0:16:48:0,48,451	0/0:19,0:19:51.09:0,51,508	0/0:34,0:32:96.15:0,96,955	0/0:17,0:17:51.12:0,51,520
chr10	11754894	.	G	GA	2214.74	PASS	AB=0.784;AC=16;AF=0.286;AN=56;BaseQRankSum=11.001;DP=562;FS=2.488;HRun=10;HaplotypeScore=79.8803;InbreedingCoeff=0.5079;MQ=69.27;MQ0=4;MQRankSum=0.678;QD=12.17;ReadPosRankSum=-3.136;VQSLOD=2.9178;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:58.79:0,59,741	0/0:13,0:13:29.94:0,30,242	0/0:24,0:19:2.71:0,3,171	0/1:15,0:11:12.93:13,0,44	0/0:21,0:21:41.91:0,42,343	0/0:24,0:24:47.86:0,48,388	0/0:25,0:25:68.86:0,69,559	1/1:7,16:22:1.81:399,2,0	0/0:16,0:16:11.85:0,12,240	0/0:18,0:17:23.90:0,24,197	0/0:20,0:22:37.05:0,37,299	1/1:4,10:15:29.87:290,30,0	0/1:8,13:22:16.94:282,0,17	0/1:6,11:18:9.18:216,0,9	0/0:15,0:16:28.96:0,29,224	0/0:10,0:10:26.95:0,27,220	0/0:35,0:34:83.87:0,84,689	0/0:29,1:32:31:0,31,522	1/1:5,12:18:41.92:403,42,0	1/1:5,10:15:5.43:263,5,0	1/1:3,17:20:5.45:263,5,0	1/1:7,8:15:5.35:237,5,0	0/1:18,2:20:21.92:22,0,251	0/0:24,0:24:53.90:0,54,440	0/0:17,0:17:13.26:0,13,226	0/0:26,0:27:55.91:0,56,447	0/0:12,0:11:27.01:0,27,205	0/0:3,0:3:5.99:0,6,49
chr10	11755463	.	C	CT	778.03	PASS	AB=0.906;AC=7;AF=0.125;AN=56;BaseQRankSum=-5.136;DP=733;FS=1.995;HRun=11;HaplotypeScore=88.3842;InbreedingCoeff=0.5407;MQ=70.39;MQ0=2;MQRankSum=-0.990;QD=8.28;ReadPosRankSum=-1.018;VQSLOD=2.5281;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:47,1:53:76.60:0,77,914	0/1:9,1:10:5.16:5,0,139	0/0:20,0:18:14.91:0,15,115	0/0:19,0:15:10.12:0,10,132	0/0:29,0:29:71.65:0,72,555	1/1:5,14:21:35.74:333,36,0	1/1:4,21:28:39.39:538,39,0	0/0:30,0:32:57.64:0,58,415	0/0:19,0:19:47.81:0,48,371	0/0:25,1:27:61.66:0,62,463	0/0:22,0:22:38.79:0,39,302	0/0:28,0:29:64.70:0,65,493	0/0:28,0:29:64.70:0,65,491	0/0:26,0:26:46.47:0,46,350	0/0:33,0:33:80.53:0,81,618	0/0:27,1:30:37.43:0,37,461	0/0:36,0:36:80.59:0,81,623	0/0:22,0:25:57.85:0,58,429	0/1:12,1:12:6.54:7,0,134	0/0:27,0:26:56.67:0,57,434	0/0:19,0:19:35.84:0,36,276	0/1:19,3:22:31.83:32,0,314	0/0:27,0:27:50.72:0,51,389	0/0:43,0:45:99:0,106,796	0/0:21,0:21:50.79:0,51,395	0/0:30,0:32:69.76:0,70,520	0/0:24,1:26:22.27:0,22,342	0/0:12,0:12:26.87:0,27,206
chr10	11755519	.	G	GCTCT	12007.15	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-11.939;DP=720;FS=1.941;HRun=0;HaplotypeScore=109.7183;InbreedingCoeff=0.9793;MQ=55.90;MQ0=17;MQRankSum=-7.751;QD=59.15;ReadPosRankSum=-0.122;VQSLOD=6.4728;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,129,2388	0/0:6,0:6:18.02:0,18,300	0/0:25,0:7:9.03:0,9,159	0/0:22,0:4:9.03:0,9,146	0/0:38,0:38:99:0,105,1957	0/0:18,0:18:42.14:0,42,784	0/0:23,0:23:60.21:0,60,1120	1/1:7,14:22:50.77:1163,51,0	0/0:19,0:19:54.19:0,54,1007	0/0:29,0:29:84.18:0,84,1555	0/0:25,0:25:69.04:0,69,1286	1/1:4,35:40:99:2624,99,0	1/1:2,20:24:60.21:1598,60,0	1/1:0,18:18:48.14:1275,48,0	0/0:23,0:23:69.24:0,69,1287	0/0:32,0:32:87.28:0,87,1593	0/0:32,0:32:87.27:0,87,1568	0/0:22,0:22:66.20:0,66,1196	1/1:11,7:17:32.81:798,33,0	1/1:0,29:28:78.27:2069,78,0	1/1:5,25:32:54.19:1440,54,0	1/1:4,13:18:38.69:1038,39,0	0/0:21,0:21:54.19:0,54,1007	0/0:39,0:39:99:0,111,2071	0/0:20,0:20:60.16:0,60,1052	0/0:32,0:32:90.30:0,90,1639	0/0:21,0:20:63.20:0,63,1144	0/0:20,0:20:57.20:0,57,1052
chr10	11756098	.	ATTTCTTTTTTTT	A	825.87	PASS	AB=1.000;AC=5;AF=0.119;AN=42;BaseQRankSum=3.614;DP=333;FS=1.052;HRun=0;HaplotypeScore=101.2085;InbreedingCoeff=0.7143;MQ=53.52;MQ0=35;MQRankSum=-1.503;QD=11.16;ReadPosRankSum=2.217;VQSLOD=1.9713;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:32:72.15:0,72,3007	0/0:5,0:4:9.03:0,9,451	0/1:55,0:8:2.47:2,0,170	0/0:42,0:11:20.18:0,20,508	0/0:14,0:14:33.01:0,33,999	1/1:5,2:11:32.91:635,33,0	1/1:6,2:7:15.10:303,15,0	0/0:1,0:1:3.01:0,3,129	0/0:10,0:10:18.05:0,18,760	0/0:10,0:9:23.56:0,24,743	0/0:14,0:14:33.09:0,33,1259	./.	./.	./.	0/0:13,0:11:24.05:0,24,924	0/0:8,0:8:24.03:0,24,990	0/0:29,0:26:74.98:0,75,2645	0/0:18,0:16:38.86:0,39,883	./.	./.	./.	./.	0/0:9,0:9:20.96:0,21,801	0/0:9,0:9:23.98:0,24,890	0/0:9,0:9:21.88:0,22,742	0/0:13,0:12:32.26:0,32,982	0/0:8,0:7:9.02:0,9,425	0/0:9,0:8:14.96:0,15,118
chr10	11756124	.	TTC	T	732.95	PASS	AB=0.961;AC=13;AF=0.342;AN=38;BaseQRankSum=-1.753;DP=324;FS=11.533;HRun=0;HaplotypeScore=37.6039;InbreedingCoeff=-0.2813;MQ=38.87;MQ0=60;MQRankSum=0.696;QD=3.82;ReadPosRankSum=-0.165;VQSLOD=0.0702;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:18:3.20:3,0,74	0/0:4,0:3:0:0,0,0	./.	0/0:27,0:4:10.77:0,11,70	1/1:16,0:13:4.57:96,5,0	0/0:12,0:10:20.98:0,21,89	0/0:16,0:9:4.83:0,5,55	0/0:2,0:1:3.01:0,3,45	0/1:12,0:10:16.11:16,0,29	0/1:6,11:14:8.15:151,0,8	0/1:14,0:13:30.29:39,0,30	./.	./.	./.	0/1:16,0:13:21.88:45,0,22	0/1:6,0:5:11.78:12,0,24	0/1:25,1:23:40.76:177,0,41	0/1:17,0:11:15.75:79,0,16	./.	./.	./.	./.	0/0:8,0:8:2.92:0,3,17	0/1:8,0:8:28.59:49,0,29	0/0:11,0:10:10.19:0,10,123	0/1:17,0:12:23.07:115,0,23	0/1:17,0:11:0.76:68,0,1	./.
chr10	11756369	.	TTA	T	10621.27	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=15.923;DP=780;FS=5.161;HRun=0;HaplotypeScore=94.7181;InbreedingCoeff=0.9997;MQ=75.29;MQ0=2;MQRankSum=-1.149;QD=35.05;ReadPosRankSum=0.113;VQSLOD=6.9996;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:67,0:67:99:0,196,3445	0/0:8,0:8:24.08:0,24,432	0/0:22,0:22:57.15:0,57,907	0/0:14,0:14:39.11:0,39,631	0/0:24,0:24:66.21:0,66,1158	1/1:5,22:27:51.17:710,51,0	1/1:1,19:20:51.17:714,51,0	1/1:5,33:38:99:1342,99,0	0/0:34,0:34:96.33:0,96,1722	0/0:35,0:34:99:0,99,1753	0/0:15,0:15:42.14:0,42,756	1/1:3,29:30:78.26:1093,78,0	1/1:1,36:37:96.17:1343,96,0	1/1:1,30:31:78.26:1092,78,0	0/0:30,0:30:84.29:0,84,1499	0/0:36,0:36:99:0,105,1879	0/0:32,0:32:78.27:0,78,1381	0/0:28,0:28:78.24:0,78,1351	1/1:1,15:16:45.15:630,45,0	1/1:2,29:31:81.27:1134,81,0	1/1:2,43:45:99:1639,117,0	1/1:1,25:26:66.22:924,66,0	0/0:19,0:19:51.16:0,51,873	0/0:36,0:36:99:0,102,1791	0/0:15,0:15:42.10:0,42,712	0/0:23,0:23:66.23:0,66,1181	0/0:24,0:24:69.24:0,69,1221	0/0:15,0:15:42.14:0,42,737
chr10	11756744	.	G	GT	7422	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=13.979;DP=766;FS=0.000;HRun=4;HaplotypeScore=87.6291;InbreedingCoeff=1.0000;MQ=94.30;MQ0=1;MQRankSum=-2.390;QD=36.20;ReadPosRankSum=-1.142;VQSLOD=4.3195;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,144,1620	0/0:13,0:13:39.11:0,39,442	0/0:29,0:29:78.21:0,78,874	0/0:39,0:39:97.75:0,98,1050	0/0:17,0:17:45.12:0,45,508	0/0:21,0:21:57.13:0,57,626	0/0:29,0:29:84.24:0,84,950	1/1:3,35:38:99:1402,105,0	0/0:23,0:23:69.20:0,69,782	0/0:32,0:32:93.26:0,93,1047	0/0:14,0:14:39.11:0,39,442	1/1:2,23:25:63.21:861,63,0	1/1:0,29:29:78.26:1067,78,0	1/1:1,23:24:54.18:737,54,0	0/0:38,0:38:99:0,102,1156	0/0:30,0:30:84.21:0,84,933	0/0:40,0:40:99:0,105,1190	0/0:18,0:17:48.14:0,48,544	1/1:1,20:21:60.17:783,60,0	1/1:1,20:21:54.18:738,54,0	1/1:0,26:26:75.25:1026,75,0	1/1:1,20:21:60.20:808,60,0	0/0:21,0:21:63.18:0,63,714	0/0:48,0:48:99:0,141,1569	0/0:29,0:29:78.22:0,78,885	0/0:24,0:24:66.19:0,66,748	0/0:28,0:28:81.21:0,81,909	0/0:17,0:17:45.13:0,45,510
chr10	11757565	.	ATC	A	7608	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=9.212;DP=805;FS=2.150;HRun=0;HaplotypeScore=130.7199;InbreedingCoeff=0.9971;MQ=77.04;MQ0=1;MQRankSum=-3.054;QD=30.93;ReadPosRankSum=2.293;VQSLOD=6.8829;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,117,1988	0/0:6,0:6:15.05:0,15,260	0/0:17,0:17:41.97:0,42,672	0/0:31,0:31:80.93:0,81,1288	0/0:21,0:21:57.20:0,57,981	0/0:27,0:27:81.28:0,81,1391	0/0:30,0:30:81.28:0,81,1395	1/1:7,22:29:69.21:897,69,0	0/0:32,0:32:93.30:0,93,1575	0/0:33,0:33:84.28:0,84,1418	0/0:11,0:11:30.10:0,30,520	1/1:3,28:31:72.24:959,72,0	1/1:2,34:36:96.32:1278,96,0	1/1:1,24:25:54.18:719,54,0	0/0:28,0:28:81.26:0,81,1370	0/0:29,0:29:75.26:0,75,1299	0/0:51,0:51:99:0,148,2519	0/0:32,0:32:87.30:0,87,1494	1/1:7,18:25:54.18:718,54,0	1/1:2,11:13:27.09:360,27,0	1/1:5,55:59:99:1678,126,0	1/1:0,27:27:75.25:999,75,0	0/0:25,0:25:54.16:0,54,890	0/0:24,0:23:66.23:0,66,1137	0/0:35,0:35:96.31:0,96,1631	0/0:35,0:35:99:0,99,1697	0/0:29,0:28:84.27:0,84,1419	0/0:21,0:21:63.19:0,63,1049
chr10	11758921	.	T	TGTCAAGGGATCTTCCA	36506.17	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=1.260;DP=723;FS=1.387;HRun=0;HaplotypeScore=265.6724;InbreedingCoeff=0.9987;MQ=77.16;MQ0=0;MQRankSum=-18.866;QD=112.67;ReadPosRankSum=-0.786;VQSLOD=4.4960;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:90.30:0,90,3838	0/0:12,0:12:30.10:0,30,1327	0/0:18,0:18:54.14:0,54,1822	0/0:23,0:23:60.63:0,61,1786	0/0:17,0:17:51.12:0,51,1939	1/1:10,0:29:48.16:3051,48,0	1/1:7,0:30:39.13:2423,39,0	1/1:48,0:48:99:8002,135,0	0/0:24,0:24:69.22:0,69,2913	0/0:29,0:29:80.56:0,81,3261	0/0:15,0:15:45.15:0,45,1890	1/1:12,0:49:90.31:6048,90,0	1/1:7,0:23:39.13:2777,39,0	1/1:6,0:33:57.20:4032,57,0	0/0:27,0:27:72.22:0,72,2763	0/0:16,0:16:48.16:0,48,2072	0/0:33,0:33:96.27:0,96,3927	0/0:19,0:19:54.11:0,54,2258	1/1:8,0:24:72.24:3662,72,0	1/1:6,1:22:42.14:2242,42,0	1/1:14,0:37:33.11:1634,33,0	1/1:6,1:29:45.15:2634,45,0	0/0:18,0:18:51.16:0,51,2135	0/0:39,0:39:99:0,108,4255	0/0:26,0:26:72.25:0,72,3066	0/0:25,0:25:69.22:0,69,2944	0/0:22,0:22:66.21:0,66,2954	0/0:6,0:6:18.06:0,18,788
chr10	11759526	.	GCCTCTGCC	G	6018.79	PASS	AC=28;AF=0.560;AN=50;BaseQRankSum=5.741;DP=454;FS=0.000;HRun=0;HaplotypeScore=118.6700;InbreedingCoeff=0.8257;MQ=56.54;MQ0=8;MQRankSum=-3.762;QD=23.24;ReadPosRankSum=2.946;VQSLOD=3.8927;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:18,15:33:12.04:301,12,0	1/1:5,6:11:13.29:374,13,0	./.	./.	./.	0/0:11,0:15:12.04:0,12,386	0/0:17,0:21:16.89:0,17,380	0/0:9,0:9:12.02:0,12,247	1/1:12,9:21:30.10:736,30,0	1/1:6,9:15:24.06:507,24,0	1/1:4,2:6:5.14:149,5,0	0/0:16,0:15:15.01:0,15,306	0/0:17,0:17:27.09:0,27,693	0/0:18,0:18:27.05:0,27,641	1/1:14,16:30:36.12:869,36,0	1/1:6,9:15:15.52:377,16,0	1/1:15,10:25:21.07:499,21,0	1/1:14,4:18:3.01:75,3,0	0/0:12,0:10:12:0,12,274	0/0:4,0:3:4.26:0,4,62	0/0:20,0:18:8.15:0,8,156	0/0:6,0:5:3.01:0,3,104	1/1:4,7:11:0.47:1,0,0	1/1:6,6:12:9.03:226,9,0	0/0:12,0:11:21.07:0,21,775	1/1:17,13:29:30.04:550,30,0	1/1:8,16:24:39.13:979,39,0	1/1:2,6:8:15.05:377,15,0
chr10	11760469	.	GA	G	5758.17	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=15.146;DP=576;FS=3.288;HRun=7;HaplotypeScore=59.9450;InbreedingCoeff=0.9474;MQ=78.95;MQ0=0;MQRankSum=-1.217;QD=26.17;ReadPosRankSum=0.018;VQSLOD=5.4121;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,111,1381	0/0:11,0:11:30.10:0,30,376	0/0:17,0:17:45.03:0,45,516	0/1:9,0:9:3.35:3,0,143	0/0:17,0:17:44.88:0,45,566	1/1:0,26:26:78.18:796,78,0	1/1:1,16:17:45.10:459,45,0	1/1:2,29:31:87.19:888,87,0	0/0:14,0:14:42.13:0,42,528	0/0:28,0:28:69.22:0,69,868	0/0:16,0:16:42.13:0,42,528	1/1:2,12:14:36.08:367,36,0	1/1:3,21:24:57.12:581,57,0	1/1:3,20:23:57.12:582,57,0	0/0:21,0:21:63.18:0,63,769	0/0:27,0:27:81.25:0,81,1008	0/0:19,0:19:57.18:0,57,717	0/0:22,0:22:57.18:0,57,714	1/1:2,14:16:42.09:429,42,0	1/1:2,21:23:60.13:612,60,0	1/1:0,16:16:42.10:429,42,0	1/1:1,20:21:60.14:612,60,0	0/0:16,0:16:45.14:0,45,566	0/0:19,0:19:54.17:0,54,679	0/0:31,0:31:87.26:0,87,1079	0/0:22,0:22:63.19:0,63,780	0/0:29,0:29:84.26:0,84,1045	0/0:10,0:10:30.10:0,30,377
chr10	11760592	.	CAG	C	2350.97	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.905;DP=723;FS=9.981;HRun=0;HaplotypeScore=95.4033;InbreedingCoeff=0.9977;MQ=71.45;MQ0=0;MQRankSum=-1.830;QD=39.85;ReadPosRankSum=0.909;VQSLOD=5.3784;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,154,2832	0/0:11,0:11:33.11:0,33,618	0/0:17,0:15:42.12:0,42,720	0/0:34,0:33:51.21:0,51,1528	0/0:28,0:28:84.29:0,84,1564	1/1:0,29:29:81.27:1192,81,0	1/1:0,30:30:87.29:1281,87,0	0/0:39,0:39:99:0,105,1935	0/0:19,0:19:48.15:0,48,847	0/0:29,0:29:84.12:0,84,1524	0/0:25,0:25:72.25:0,72,1346	0/0:27,0:27:78.27:0,78,1460	0/0:20,0:20:60.17:0,60,1059	0/0:23,0:23:69.22:0,69,1255	0/0:18,0:18:51.15:0,51,893	0/0:24,0:24:72.25:0,72,1347	0/0:38,0:38:99:0,111,1978	0/0:23,0:23:66.23:0,66,1235	0/0:21,0:21:63.22:0,63,1131	0/0:36,0:36:99:0,99,1845	0/0:42,0:42:99:0,123,2215	0/0:24,0:24:69.24:0,69,1263	0/0:23,0:23:66.23:0,66,1235	0/0:29,0:29:87.27:0,87,1565	0/0:14,0:14:42.14:0,42,764	0/0:26,0:26:78.25:0,78,1383	0/0:16,0:16:48.16:0,48,896	0/0:7,0:7:21.07:0,21,383
chr10	11761868	.	G	GT	5653.47	PASS	AB=0.956;AC=52;AF=0.929;AN=56;BaseQRankSum=-4.178;DP=713;FS=23.680;HRun=0;HaplotypeScore=278.9901;InbreedingCoeff=-0.0936;MQ=75.91;MQ0=0;MQRankSum=9.906;QD=7.93;ReadPosRankSum=7.198;VQSLOD=3.4385;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:49,0:49:68.15:388,68,0	1/1:15,0:12:10.90:103,11,0	0/1:15,1:16:34.57:35,0,64	0/1:20,3:23:57.48:173,0,57	1/1:29,0:29:12.88:135,13,0	1/1:32,0:32:41.68:234,42,0	1/1:21,0:21:16.69:188,17,0	1/1:27,0:27:28.59:145,29,0	1/1:20,0:20:38.13:188,38,0	1/1:35,0:35:70.03:533,70,0	1/1:27,1:28:0.26:134,0,0	1/1:27,0:27:52.22:318,52,0	1/1:17,0:17:14.20:103,14,0	1/1:24,0:24:21.65:132,22,0	1/1:26,0:26:44.74:258,45,0	1/1:29,0:29:65.03:401,65,0	1/1:33,0:33:61.12:317,61,0	1/1:20,0:20:32.17:140,32,0	1/1:13,0:13:15.46:67,15,0	0/1:19,0:18:28.23:74,0,28	1/1:58,0:58:45.99:321,46,0	0/1:21,0:21:8.78:54,0,9	1/1:20,1:20:22.58:128,23,0	1/1:26,0:26:48.02:245,48,0	1/1:21,0:20:33.43:188,33,0	1/1:22,0:22:51.27:346,51,0	1/1:35,0:35:51.89:283,52,0	1/1:6,0:6:4.03:23,4,0
chr10	11766172	.	C	CG	1689.87	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-10.333;DP=702;FS=2.622;HRun=6;HaplotypeScore=68.5135;InbreedingCoeff=0.9978;MQ=85.43;MQ0=0;MQRankSum=-2.103;QD=30.72;ReadPosRankSum=-1.021;VQSLOD=3.9402;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,153,1560	0/0:9,0:9:21.05:0,21,214	0/0:22,0:22:51.02:0,51,491	0/0:24,0:24:52.42:0,52,461	0/0:30,0:30:75.13:0,75,754	1/1:2,26:28:72.23:906,72,0	1/1:3,24:27:72.23:906,72,0	0/0:31,0:31:69.13:0,69,692	0/0:20,0:20:45.10:0,45,459	0/0:23,0:23:48.08:0,48,485	0/0:13,0:13:36.08:0,36,367	0/0:27,0:27:75.17:0,75,765	0/0:21,0:21:60.14:0,60,612	0/0:31,0:31:87.20:0,87,886	0/0:22,0:22:60.12:0,60,606	0/0:16,0:16:42.09:0,42,428	0/0:38,0:38:96.20:0,96,979	0/0:25,0:25:75.17:0,75,765	0/0:28,0:28:66.11:0,66,658	0/0:20,0:19:45.08:0,45,452	0/0:46,0:46:99:0,114,1163	0/0:17,0:17:45.08:0,45,450	0/0:21,0:21:51.11:0,51,519	0/0:26,0:26:66.14:0,66,673	0/0:23,0:23:57.13:0,57,581	0/0:21,0:21:60.12:0,60,606	0/0:22,0:22:57.13:0,57,581	0/0:16,0:16:48.11:0,48,489
chr10	11766670	.	CT	C	10151.74	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=16.634;DP=880;FS=6.853;HRun=2;HaplotypeScore=85.9401;InbreedingCoeff=0.9999;MQ=83.45;MQ0=0;MQRankSum=-2.062;QD=35.01;ReadPosRankSum=0.757;VQSLOD=5.0973;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,160,2359	0/0:14,0:14:39.13:0,39,582	0/0:30,0:30:87.29:0,87,1254	0/0:20,0:20:51.18:0,51,773	0/0:23,0:23:66.19:0,66,931	0/0:17,0:17:48.15:0,48,700	0/0:28,0:28:81.26:0,81,1194	1/1:0,21:21:60.18:763,60,0	0/0:39,0:39:99:0,117,1674	0/0:33,0:33:96.32:0,96,1406	0/0:12,0:12:36.11:0,36,521	1/1:0,37:37:99:1362,105,0	1/1:1,45:46:99:1359,105,0	1/1:0,55:55:99:2023,157,0	0/0:40,0:40:99:0,117,1732	0/0:42,0:42:99:0,126,1829	0/0:50,0:50:99:0,150,2180	0/0:20,0:20:54.17:0,54,788	1/1:1,25:26:75.21:930,75,0	1/1:0,19:19:51.10:641,51,0	1/1:0,53:53:99:1907,147,0	1/1:0,33:33:90.04:1167,90,0	0/0:13,0:13:36.11:0,36,518	0/0:39,0:39:99:0,114,1645	0/0:34,0:34:99:0,102,1470	0/0:37,0:37:99:0,111,1595	0/0:30,0:30:90.27:0,90,1285	0/0:15,0:15:45.15:0,45,674
chr10	11767737	.	A	ATAGCTCTG	57108.94	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-9.641;DP=772;FS=8.590;HRun=0;HaplotypeScore=200.4645;InbreedingCoeff=0.9921;MQ=75.92;MQ0=0;MQRankSum=-15.672;QD=87.59;ReadPosRankSum=4.178;VQSLOD=4.4519;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,24:42:84.29:3640,84,0	1/1:3,6:9:27.09:1112,27,0	0/0:30,0:30:84.10:0,84,1914	0/0:22,0:22:57.16:0,57,1422	1/1:11,16:30:45.15:1983,45,0	0/0:26,0:26:78.25:0,78,2036	0/0:26,0:26:72.25:0,72,2003	1/1:17,16:38:99:3748,102,0	1/1:7,21:33:66.04:2796,66,0	1/1:4,14:23:60.18:2323,60,0	1/1:10,10:23:21.07:926,21,0	1/1:12,20:36:71.87:3053,72,0	1/1:14,22:37:90.31:3864,90,0	1/1:12,31:46:99:4982,114,0	1/1:10,24:39:84.29:3619,84,0	1/1:11,20:33:75.26:3238,75,0	1/1:9,21:34:69.24:3013,69,0	1/1:4,11:19:33.11:1458,33,0	1/1:17,8:26:72.24:2736,72,0	1/1:5,11:21:33.11:1375,33,0	1/1:10,8:21:15.01:531,15,0	1/1:6,15:26:42.14:1852,42,0	1/1:6,9:17:21.07:926,21,0	1/1:10,14:25:36.12:1552,36,0	0/0:16,0:16:42.13:0,42,1044	1/1:7,26:34:99:4094,99,0	1/1:5,23:33:84.29:3621,84,0	1/1:2,4:7:18.06:666,18,0
chr10	11767866	.	A	AG	16958.56	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=10.179;DP=766;FS=4.038;HRun=3;HaplotypeScore=147.8121;InbreedingCoeff=0.9687;MQ=78.46;MQ0=0;MQRankSum=3.286;QD=37.85;ReadPosRankSum=2.527;VQSLOD=3.5976;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,44:45:99:1386,99,0	1/1:1,9:10:24.08:336,24,0	0/0:21,0:21:34.38:0,34,523	0/0:17,0:17:1.69:0,2,264	1/1:2,15:17:51.15:689,51,0	1/1:0,18:18:54.15:733,54,0	1/1:0,27:27:72.24:1008,72,0	0/0:28,0:28:75.22:0,75,888	1/1:2,36:38:99:1426,102,0	1/1:1,20:21:60.14:783,60,0	1/1:0,19:19:54.18:755,54,0	0/0:31,0:31:90.27:0,90,1074	0/0:37,0:37:99:0,102,1209	0/0:41,0:41:99:0,117,1403	1/1:0,35:35:99:1469,105,0	1/1:3,32:35:90.30:1260,90,0	1/1:1,32:32:84.28:1176,84,0	1/1:0,38:38:99:1554,111,0	0/0:26,0:26:75.19:0,75,883	0/0:18,0:18:51.16:0,51,611	0/0:55,0:55:99:0,162,1930	0/0:23,0:23:66.20:0,66,791	1/1:0,8:8:24.08:333,24,0	1/1:1,31:32:84.28:1176,84,0	0/0:21,0:21:51.15:0,51,612	1/1:0,35:36:99:1448,105,0	1/1:1,27:28:78.26:1092,78,0	1/1:0,8:8:24.08:336,24,0
chr10	11769201	.	CTG	C	163.90	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=2.941;DP=965;FS=4.810;HRun=0;HaplotypeScore=193.7402;InbreedingCoeff=0.9754;MQ=64.67;MQ0=10;MQRankSum=-3.483;QD=3.21;ReadPosRankSum=-0.061;VQSLOD=2.4139;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,126,2288	0/0:13,0:13:36.07:0,36,579	0/0:31,0:27:75.25:0,75,1306	0/0:31,0:20:39.59:0,40,639	0/0:30,0:30:69.20:0,69,1189	1/1:4,20:23:15.25:144,15,0	1/1:22,5:23:12.02:133,12,0	0/0:48,0:45:99:0,123,2115	0/0:37,0:37:99:0,105,1924	0/0:46,0:44:99:0,129,2255	0/0:18,0:17:30.07:0,30,516	0/0:51,0:49:99:0,105,1861	0/0:41,0:41:99:0,99,1784	0/0:55,0:54:99:0,123,2160	0/0:33,0:32:90.29:0,90,1619	0/0:40,0:39:99:0,114,2082	0/0:35,0:35:93.25:0,93,1632	0/0:29,0:29:87.22:0,87,1501	0/0:24,0:23:54.14:0,54,865	0/0:26,0:25:63.15:0,63,1011	0/0:62,0:60:99:0,141,2564	0/0:26,0:25:63.19:0,63,1079	0/0:18,0:18:39.12:0,39,651	0/0:51,0:49:99:0,126,2222	0/0:35,0:27:63.19:0,63,1115	0/0:36,0:35:99:0,105,1898	0/0:28,0:28:81.28:0,81,1459	0/0:23,0:22:60.16:0,60,1034
chr10	11769208	.	TGTGTCA	T	302.90	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.398;DP=994;FS=1.045;HRun=0;HaplotypeScore=276.7938;InbreedingCoeff=0.9191;MQ=61.89;MQ0=12;MQRankSum=-2.716;QD=7.04;ReadPosRankSum=-1.157;VQSLOD=1.8261;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,120,3621	0/0:12,0:12:16.45:0,16,704	0/0:31,0:24:45.15:0,45,1291	0/0:34,0:20:10.73:0,11,374	0/0:28,0:28:66.21:0,66,1946	1/1:4,18:21:18.04:294,18,0	1/1:16,5:17:6.91:119,7,0	0/0:52,0:49:99:0,138,3394	0/0:46,0:46:99:0,123,3166	0/0:48,0:45:99:0,114,3257	0/0:15,0:14:27.09:0,27,891	0/0:55,0:53:99:0,102,3124	0/0:47,0:47:99:0,108,3091	0/0:60,0:59:99:0,141,3928	0/0:37,0:36:87.18:0,87,2866	0/0:42,0:41:99:0,117,3686	0/0:34,0:34:83.94:0,84,2471	0/0:30,0:30:84.16:0,84,2438	0/0:22,0:21:39.10:0,39,1005	0/0:25,0:24:63.06:0,63,1592	0/0:68,0:64:99:0,147,4373	0/0:24,0:23:60.18:0,60,1561	0/0:17,0:17:20.78:0,21,624	0/0:53,0:51:99:0,129,3819	0/0:33,0:25:60.14:0,60,1662	0/0:36,0:35:96.31:0,96,3041	0/0:30,0:30:78.24:0,78,2550	0/0:22,0:21:63.22:0,63,1934
chr10	11769304	.	CGTCTGTGTCTGA	C	2950.49	PASS	AB=0.806;AC=10;AF=0.185;AN=54;BaseQRankSum=5.791;DP=933;FS=18.803;HRun=0;HaplotypeScore=273.8724;InbreedingCoeff=0.5144;MQ=55.84;MQ0=48;MQRankSum=-2.251;QD=11.80;ReadPosRankSum=-3.586;VQSLOD=0.7079;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:48:74.55:0,75,2914	0/0:13,0:13:19.29:0,19,811	0/0:48,0:20:28.28:0,28,528	0/0:71,0:29:32.43:0,32,723	0/0:18,0:18:9.03:0,9,274	0/0:16,0:15:2.47:0,2,19	0/0:22,0:23:2.91:0,3,29	1/1:16,16:29:45.15:804,45,0	0/0:40,0:40:72.25:0,72,3413	0/0:28,0:26:54.17:0,54,1595	0/0:12,0:9:9.02:0,9,175	1/1:36,6:41:11.88:258,12,0	0/1:32,7:37:8.87:769,0,9	0/1:39,2:41:99:360,0,120	0/0:45,0:45:99:0,108,4460	0/0:45,0:45:99:0,111,4420	0/0:42,0:42:94.05:0,94,4221	0/0:23,0:23:47.99:0,48,1764	0/1:16,6:20:37.90:419,0,38	0/1:12,16:25:0.02:0,0,0	1/1:46,0:39:18.03:492,18,0	./.	0/0:11,0:8:18.06:0,18,744	0/0:55,0:55:93.32:0,93,3910	0/0:27,0:26:36.10:0,36,1459	0/0:33,0:32:66.23:0,66,2140	0/0:32,0:32:69.21:0,69,2895	0/0:11,0:10:18.06:0,18,665
chr10	11769310	.	TGTCTGA	T	408.84	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=6.008;DP=927;FS=6.845;HRun=0;HaplotypeScore=215.3209;InbreedingCoeff=0.3008;MQ=56.35;MQ0=34;MQRankSum=-1.287;QD=1.74;ReadPosRankSum=-1.551;VQSLOD=1.1394;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:44:90.10:0,90,2633	0/0:16,0:16:24.92:0,25,590	0/0:46,0:21:44.98:0,45,1000	0/0:68,0:30:60.04:0,60,1135	0/0:20,0:20:23.99:0,24,444	1/1:9,6:14:11.09:174,11,0	1/1:19,6:22:12.88:171,13,0	0/0:27,0:27:35.97:0,36,441	0/0:39,0:39:90.25:0,90,2626	0/0:27,0:25:72.03:0,72,1940	0/0:9,0:7:15.05:0,15,346	0/1:42,0:41:46.95:47,0,401	0/1:41,0:39:6.32:6,0,513	0/1:45,0:44:19.43:19,0,666	0/0:49,0:49:99:0,129,3917	0/0:49,0:49:99:0,138,3995	0/0:48,0:48:99:0,120,3230	0/0:25,0:25:62.99:0,63,1577	0/1:21,0:20:97.19:97,0,317	0/0:26,0:24:5.92:0,6,99	0/1:46,0:37:38.71:39,0,372	0/0:34,0:31:18.52:0,19,287	0/0:11,0:10:24.08:0,24,709	0/0:53,0:53:99:0,117,3375	0/0:26,0:25:48.09:0,48,1232	0/0:36,0:35:93.27:0,93,2508	0/0:28,0:28:75.22:0,75,2334	0/0:9,0:9:8.01:0,8,578
chr10	11769588	.	TA	T	6353.33	PASS	AB=0.500;AC=51;AF=0.911;AN=56;BaseQRankSum=-5.189;DP=530;FS=36.544;HRun=1;HaplotypeScore=109.4707;InbreedingCoeff=0.6276;MQ=73.35;MQ0=8;MQRankSum=-3.502;QD=14.84;ReadPosRankSum=2.783;VQSLOD=2.7992;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,43:38:41.75:574,42,0	1/1:0,9:8:9:126,9,0	0/0:18,9:9:22.34:0,22,143	0/0:66,8:36:19.79:0,20,318	1/1:0,17:17:8.72:125,9,0	0/1:0,3:3:0:0,0,0	1/1:0,7:4:6.02:84,6,0	1/1:1,5:4:12.02:150,12,0	1/1:0,25:25:35.84:480,36,0	1/1:1,13:10:27.09:377,27,0	1/1:0,10:10:8.78:126,9,0	1/1:2,11:11:10.72:86,11,0	1/1:2,11:12:8.11:108,8,0	1/1:4,14:17:7.73:79,8,0	1/1:0,42:40:27.07:379,27,0	1/1:0,18:18:24.06:336,24,0	1/1:0,19:19:38.92:490,39,0	1/1:0,21:21:42.14:587,42,0	1/1:2,4:6:15.02:188,15,0	1/1:2,17:10:6:84,6,0	1/1:3,16:19:6.02:84,6,0	1/1:2,7:7:6.02:84,6,0	1/1:0,7:7:9.03:126,9,0	1/1:0,24:22:12.03:168,12,0	1/1:0,14:8:9.03:126,9,0	1/1:0,23:21:43.43:712,43,0	1/1:0,17:17:23.54:313,24,0	1/1:0,9:9:27.08:363,27,0
chr10	11771907	.	TGAGTCC	T	456.14	PASS	AB=0.957;AC=20;AF=0.385;AN=52;BaseQRankSum=3.482;DP=446;FS=25.388;HRun=0;HaplotypeScore=113.5570;InbreedingCoeff=-0.0183;MQ=53.52;MQ0=22;MQRankSum=-4.944;QD=1.58;ReadPosRankSum=-1.449;VQSLOD=0.3672;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:14,1:12:7.95:0,8,116	0/0:8,0:6:3.55:0,4,72	0/0:7,0:2:2.52:0,3,17	0/0:33,0:17:12.72:0,13,67	0/0:12,0:11:9.50:0,10,205	1/1:9,0:5:2.96:19,3,0	0/1:25,0:15:0:1,0,0	./.	0/1:29,2:31:3.49:3,0,91	0/1:15,0:10:19.38:19,0,276	./.	0/1:19,5:23:13.86:130,0,14	0/1:27,1:26:39.18:61,0,39	1/1:16,0:13:3.78:16,4,0	0/1:32,2:33:0.74:1,0,88	0/1:33,2:35:96.73:97,0,104	0/0:14,0:14:2.68:0,3,157	0/1:18,0:18:15.18:15,0,271	1/1:3,0:2:5.87:39,6,0	1/1:5,0:3:2.69:8,3,0	0/0:19,1:15:5.91:0,6,38	0/0:9,0:6:3.01:0,3,39	1/1:8,0:5:2.04:6,2,0	0/0:22,0:22:11.47:0,11,196	0/0:8,0:6:4.25:0,4,82	0/1:18,0:11:88.82:89,0,96	0/1:18,1:18:89.45:89,0,153	0/0:3,0:1:3.01:0,3,80
chr10	11771931	.	T	TGTATCA	164.64	PASS	AB=0.994;AC=7;AF=0.125;AN=56;BaseQRankSum=5.625;DP=835;FS=14.878;HRun=0;HaplotypeScore=214.1432;InbreedingCoeff=0.1168;MQ=42.59;MQ0=88;MQRankSum=-3.350;QD=1.00;ReadPosRankSum=-3.037;VQSLOD=1.0653;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:25:31.15:0,31,724	0/0:13,0:11:12.49:0,12,282	0/0:39,0:3:4.20:0,4,22	0/0:82,0:19:14.90:0,15,134	0/0:17,0:15:14.92:0,15,357	0/1:20,0:14:17.77:20,0,18	1/1:48,0:34:25.84:184,26,0	0/0:21,0:4:12.03:0,12,191	0/1:38,0:38:47.48:47,0,436	0/0:43,0:33:44.75:0,45,1476	0/0:8,0:7:6.01:0,6,98	0/1:30,1:29:24.12:24,0,383	0/0:34,0:32:30.58:0,31,477	0/0:23,1:19:14.63:0,15,229	0/0:47,2:48:23.28:0,23,560	0/0:46,1:46:11.59:0,12,1018	0/0:20,0:20:46.68:0,47,903	0/0:29,0:29:64.65:0,65,1356	0/1:12,0:4:10.80:11,0,134	0/1:14,0:11:8.78:9,0,135	0/0:53,0:31:22.23:0,22,451	0/0:24,0:17:11.67:0,12,212	0/0:9,0:7:8.98:0,9,161	0/0:36,0:35:50.70:0,51,1027	0/0:20,0:11:18.06:0,18,399	0/0:36,0:26:15.52:0,16,1142	0/0:32,0:29:8.55:0,9,715	0/0:3,0:1:3.01:0,3,72
chr10	11772089	.	A	AGTCTGT	2548.67	PASS	AB=0.946;AC=18;AF=0.321;AN=56;BaseQRankSum=-1.053;DP=1113;FS=0.000;HRun=0;HaplotypeScore=173.3961;InbreedingCoeff=0.7138;MQ=42.53;MQ0=140;MQRankSum=-2.003;QD=7.50;ReadPosRankSum=-6.665;VQSLOD=0.0037;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:50:87.07:0,87,1466	0/0:8,0:7:6.02:0,6,111	0/0:57,0:2:3.01:0,3,43	0/0:112,0:13:10.66:0,11,68	0/0:25,0:22:17.18:0,17,206	0/1:17,0:13:18.07:18,0,85	1/1:29,0:15:0.89:2,1,0	1/1:26,0:11:23.87:182,24,0	0/0:43,0:42:72.20:0,72,1345	0/0:55,0:48:99:0,109,1685	0/0:21,0:17:12.25:0,12,236	1/1:12,31:49:14.79:485,15,0	1/1:24,10:30:43.02:547,43,0	1/1:29,7:21:27.03:477,27,0	0/0:48,0:46:69.79:0,70,1207	0/0:49,0:47:96.23:0,96,1817	0/0:41,0:40:63.79:0,64,1539	0/0:28,0:28:60.15:0,60,1239	0/1:22,3:13:39.03:293,0,39	1/1:22,1:17:14.63:183,15,0	1/1:68,2:56:32:528,32,0	1/1:26,0:11:2.99:24,3,0	0/0:31,0:21:20.86:0,21,257	0/0:61,0:60:99:0,117,2242	0/0:36,0:28:38.89:0,39,572	0/0:54,0:42:99:0,102,1511	0/0:32,0:30:48.30:0,48,1011	0/0:10,0:10:18.06:0,18,366
chr10	11772137	.	TGTCTGA	T	175.77	PASS	AB=0.818;AC=5;AF=0.089;AN=56;BaseQRankSum=5.404;DP=1105;FS=0.835;HRun=0;HaplotypeScore=235.1643;InbreedingCoeff=0.5725;MQ=70.63;MQ0=36;MQRankSum=2.287;QD=3.08;ReadPosRankSum=-4.570;VQSLOD=1.4898;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:47:30.10:0,30,781	0/0:14,0:13:14.53:0,15,431	0/0:83,0:37:49.23:0,49,805	0/0:133,0:72:39.14:0,39,1335	1/1:22,0:21:0.37:1,0,0	0/1:7,2:5:19.44:21,0,19	1/1:16,10:21:18.02:257,18,0	0/0:54,0:49:99:0,123,2977	0/0:38,0:36:26.14:0,26,903	0/0:44,0:38:99:0,99,2307	0/0:15,0:12:9.03:0,9,264	0/0:52,0:51:55.09:0,55,1503	0/0:46,0:46:95.69:0,96,2634	0/0:33,0:23:45.07:0,45,1372	0/0:53,0:52:39.58:0,40,1072	0/0:49,0:49:53.64:0,54,1344	0/0:31,0:31:27.85:0,28,769	0/0:24,0:24:51.01:0,51,1125	0/0:30,0:22:54.60:0,55,1122	0/0:33,0:29:45.09:0,45,1293	0/0:83,0:69:89.94:0,90,2555	0/0:32,0:22:12.44:0,12,314	0/0:18,0:12:9.03:0,9,218	0/0:41,0:40:69.11:0,69,2010	0/0:27,0:20:25:0,25,459	0/0:30,0:24:51.10:0,51,1332	0/0:25,0:24:33.57:0,34,960	0/0:8,0:8:9.03:0,9,226
chr10	11772157	.	AGTCTGAGTCTGT	A	2926.03	PASS	AB=0.663;AC=23;AF=0.442;AN=52;BaseQRankSum=1.826;DP=963;FS=4.148;HRun=0;HaplotypeScore=260.6500;InbreedingCoeff=0.6671;MQ=80.22;MQ0=17;MQRankSum=-0.671;QD=6.19;ReadPosRankSum=-0.168;VQSLOD=2.4622;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	1/1:5,7:11:1.04:3,1,0	0/0:77,0:51:29.56:0,30,570	0/1:128,0:81:1.14:1,0,454	0/1:4,16:20:0:0,0,0	0/0:15,0:12:12.01:0,12,378	0/0:41,0:32:29.31:0,29,722	0/0:43,0:41:69.17:0,69,1351	1/1:7,36:42:3.01:92,3,0	1/1:6,29:33:72.05:1203,72,0	./.	0/0:41,0:40:51.12:0,51,1204	0/0:38,0:38:77.83:0,78,1476	0/0:23,0:17:32.84:0,33,551	0/1:10,42:52:0.22:0,0,1	1/1:10,37:47:2.84:94,3,0	1/1:9,24:33:2.84:14,3,0	1/1:14,1:15:26.98:593,27,0	0/0:27,0:25:57.17:0,57,1261	0/0:24,0:22:26.88:0,27,646	0/0:70,0:62:71.66:0,72,1660	0/0:22,0:17:0.73:0,1,51	0/1:4,7:11:0:0,0,0	1/1:33,0:32:30.07:751,30,0	0/0:21,0:15:18.06:0,18,589	1/1:12,1:12:21:316,21,0	0/1:8,17:25:0:0,0,0	1/1:1,5:6:2.97:20,3,0
chr10	11772169	.	T	TGA	606.66	PASS	AB=0.949;AC=10;AF=0.185;AN=54;BaseQRankSum=3.056;DP=895;FS=4.736;HRun=0;HaplotypeScore=164.2024;InbreedingCoeff=0.1756;MQ=74.73;MQ0=29;MQRankSum=0.754;QD=3.23;ReadPosRankSum=-4.513;VQSLOD=1.4337;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:34:1.71:0,2,42	0/0:8,0:8:0.43:0,0,1	0/0:69,0:42:76.31:0,76,945	0/0:116,0:68:49.64:0,50,1066	0/0:17,0:17:0.36:0,0,1	0/0:18,0:15:11.08:0,11,182	0/0:44,0:34:31.82:0,32,465	0/0:42,0:34:93.27:0,93,1372	1/1:39,0:38:3:26,3,0	0/1:31,0:31:99:211,0,665	./.	0/0:36,0:35:51.17:0,51,780	0/0:36,0:35:77.74:0,78,1187	0/0:20,0:15:39.09:0,39,580	0/0:45,0:45:2.63:0,3,45	1/1:40,0:40:2.94:57,3,0	0/0:27,0:27:9.03:0,9,136	0/1:13,5:18:99:251,0,305	0/0:29,0:23:69.23:0,69,1034	0/0:24,0:18:30.08:0,30,452	0/0:67,0:60:78.26:0,78,1188	0/0:24,0:16:9.03:0,9,135	0/1:8,0:7:0:0,0,0	0/1:29,3:30:94.15:94,0,438	0/0:21,0:15:17.93:0,18,274	0/1:14,0:13:80.40:80,0,354	0/0:20,0:20:6.01:0,6,86	0/1:6,0:6:13.98:14,0,38
chr10	11772202	.	CTGTGTG	C	94.76	PASS	AB=0.984;AC=8;AF=0.143;AN=56;BaseQRankSum=3.770;DP=939;FS=6.014;HRun=0;HaplotypeScore=161.7089;InbreedingCoeff=0.2449;MQ=49.17;MQ0=66;MQRankSum=-3.578;QD=0.56;ReadPosRankSum=0.469;VQSLOD=2.1266;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:49:74.54:0,75,1755	0/0:19,0:18:18.19:0,18,468	0/0:74,0:15:32.52:0,33,558	0/0:108,0:23:37.16:0,37,413	0/0:23,0:19:17.85:0,18,278	0/0:20,3:22:26.80:0,27,511	0/0:52,0:42:43.96:0,44,574	0/1:31,0:18:32.76:33,0,246	0/0:41,0:40:42.14:0,42,1026	0/0:39,0:36:82.20:0,82,2064	0/0:19,0:14:15.88:0,16,377	0/0:17,0:16:9.18:0,9,42	0/0:14,1:14:2.79:0,3,43	1/1:13,0:8:4.69:20,5,0	0/0:48,0:48:35.69:0,36,903	0/0:50,0:48:55.77:0,56,1337	0/0:24,0:24:27.08:0,27,535	0/0:30,0:30:65.57:0,66,1642	0/1:31,0:13:99:108,0,127	0/1:18,0:13:9.62:10,0,127	0/1:67,4:65:34.08:34,0,455	1/1:5,0:3:2.94:18,3,0	0/0:15,0:13:15.04:0,15,353	0/0:31,0:29:49.07:0,49,1138	0/0:22,0:20:27.05:0,27,439	0/0:36,0:32:90.11:0,90,1936	0/0:23,0:23:26.84:0,27,708	0/0:5,0:5:9.03:0,9,226
chr10	11772222	.	G	GAGAC	249.99	PASS	AB=0.917;AC=5;AF=0.093;AN=54;BaseQRankSum=4.099;DP=983;FS=11.678;HRun=0;HaplotypeScore=149.0169;InbreedingCoeff=0.6517;MQ=51.83;MQ0=74;MQRankSum=-0.909;QD=8.62;ReadPosRankSum=-3.390;VQSLOD=1.0163;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:49:85.53:0,86,1764	0/0:22,0:21:42.96:0,43,815	0/0:66,0:12:24.55:0,25,432	0/0:115,0:33:43.66:0,44,572	0/0:26,0:22:30.57:0,31,630	0/0:24,0:23:38.52:0,39,816	0/0:44,0:34:57.15:0,57,1122	0/0:39,0:33:96.32:0,96,1894	0/0:42,0:40:56.74:0,57,1180	0/0:44,0:38:99:0,106,2069	0/0:24,0:18:26.84:0,27,525	1/1:7,3:10:5.96:130,6,0	0/1:10,1:9:25.51:77,0,26	1/1:6,2:5:5.81:154,6,0	0/0:48,0:47:62.40:0,62,1276	0/0:56,0:54:99:0,102,2120	0/0:27,0:27:58.40:0,58,1111	0/0:33,0:32:87.74:0,88,1782	0/0:37,0:12:29.31:0,29,514	0/0:20,0:15:20.67:0,21,440	0/0:75,0:70:81.56:0,82,1871	./.	0/0:21,0:17:24.08:0,24,503	0/0:39,0:36:69.24:0,69,1432	0/0:23,0:21:41.71:0,42,877	0/0:44,0:38:99:0,108,2127	0/0:22,0:22:39.13:0,39,803	0/0:5,0:5:12.04:0,12,251
chr10	11772258	.	GAGAC	G	76.59	PASS	AB=0.750;AC=8;AF=0.143;AN=56;BaseQRankSum=7.099;DP=1012;FS=2.772;HRun=0;HaplotypeScore=173.8004;InbreedingCoeff=0.6912;MQ=76.74;MQ0=17;MQRankSum=-0.849;QD=1.04;ReadPosRankSum=-3.338;VQSLOD=2.0936;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,1:48:99:0,114,3117	0/0:17,0:17:36.55:0,37,922	0/0:60,0:38:42.91:0,43,1255	0/0:135,0:79:99:0,101,1787	0/0:15,1:14:30.10:0,30,811	0/0:18,0:18:33.58:0,34,937	0/0:50,0:48:80.94:0,81,2113	0/0:42,0:41:99:0,123,3109	0/0:43,2:44:99:0,101,2829	0/0:37,2:34:99:0,105,2846	0/0:26,0:21:39.13:0,39,972	0/1:2,15:17:0:1,0,0	1/1:0,10:9:5.98:83,6,0	1/1:1,11:12:3:62,3,0	0/0:56,0:56:99:0,148,4030	0/0:53,2:54:99:0,144,4086	0/0:39,0:39:98.38:0,98,2804	0/0:35,1:35:92.02:0,92,2665	0/1:30,1:26:2.08:2,0,1543	0/0:23,0:18:42.62:0,43,1102	0/0:62,7:66:99:0,130,3646	1/1:1,3:2:3.01:42,3,0	0/0:18,0:15:29.13:0,29,785	0/0:48,0:46:99:0,105,2943	0/0:23,0:22:54.09:0,54,1290	0/0:38,1:36:99:0,108,2929	0/0:23,0:23:55.87:0,56,1645	0/0:8,0:8:21.07:0,21,559
chr10	11772319	.	ACTGT	A	1701.48	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.531;DP=1061;FS=1.331;HRun=0;HaplotypeScore=181.9505;InbreedingCoeff=0.9865;MQ=71.10;MQ0=15;MQRankSum=1.618;QD=22.39;ReadPosRankSum=2.838;VQSLOD=3.2231;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:51:99:0,123,3257	0/0:18,0:18:51.16:0,51,1274	0/0:59,0:39:38.80:0,39,1598	0/0:111,0:67:93.58:0,94,1948	0/0:19,0:18:45.15:0,45,1124	1/1:1,22:22:36.59:684,37,0	1/1:3,50:51:60.12:1139,60,0	0/0:44,0:34:93.30:0,93,2334	0/0:41,0:41:99:0,105,2702	0/0:44,0:43:99:0,123,3122	0/0:24,0:22:48.16:0,48,1191	0/0:46,0:45:65.83:0,66,1492	0/0:29,0:26:44.98:0,45,1112	0/0:34,0:28:42:0,42,1118	0/0:60,0:60:99:0,153,3894	0/0:40,0:40:99:0,105,2549	0/0:40,0:40:99:0,111,2861	0/0:27,0:26:75.26:0,75,1978	0/0:29,0:25:67.16:0,67,1812	0/0:30,0:24:66.17:0,66,1621	0/0:61,0:59:99:0,144,3802	0/0:19,0:17:36.12:0,36,930	0/0:14,0:13:36.08:0,36,899	0/0:44,0:44:99:0,117,2930	0/0:18,0:17:12.89:0,13,969	0/0:31,0:29:81.28:0,81,2115	0/0:37,0:37:99:0,108,2869	0/0:11,0:11:30.08:0,30,706
chr10	11772322	.	GTC	G	287.19	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.254;DP=1042;FS=3.037;HRun=0;HaplotypeScore=158.6238;InbreedingCoeff=0.9992;MQ=72.21;MQ0=11;MQRankSum=4.211;QD=3.93;ReadPosRankSum=2.786;VQSLOD=3.0631;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,123,2375	0/0:20,0:20:54.17:0,54,1009	0/0:56,0:38:52.99:0,53,1230	0/0:105,1:67:90.51:0,91,1604	0/0:19,0:18:48.16:0,48,926	1/1:23,0:22:33.46:153,33,0	1/1:50,0:48:56:255,56,0	0/0:37,0:31:93.32:0,93,1781	0/0:43,0:43:99:0,105,1984	0/0:46,0:45:99:0,135,2539	0/0:23,0:21:48.16:0,48,883	0/0:45,0:44:64:0,64,1137	0/0:31,0:29:51.02:0,51,887	0/0:33,0:27:42.06:0,42,811	0/0:57,0:57:99:0,151,2869	0/0:40,0:40:99:0,102,1890	0/0:42,0:42:99:0,117,2147	0/0:26,0:25:75.21:0,75,1410	0/0:27,0:25:72.20:0,72,1347	0/0:30,0:24:66.23:0,66,1242	0/0:59,1:59:99:0,147,2805	0/0:19,0:17:36.12:0,36,685	0/0:16,0:15:42.04:0,42,725	0/0:42,3:45:99:0,120,2253	0/0:19,0:18:36.19:0,36,783	0/0:31,0:29:84.29:0,84,1611	0/0:38,0:38:99:0,111,2124	0/0:10,0:10:27.09:0,27,500
chr10	11772507	.	AGTCTGT	A	3397.46	PASS	AB=0.925;AC=10;AF=0.179;AN=56;BaseQRankSum=2.211;DP=1173;FS=0.000;HRun=0;HaplotypeScore=227.8482;InbreedingCoeff=0.0351;MQ=56.75;MQ0=77;MQRankSum=0.094;QD=7.24;ReadPosRankSum=-3.944;VQSLOD=1.8851;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:45:92.64:0,93,2247	0/0:15,0:15:22.30:0,22,526	0/0:67,0:9:8.97:0,9,153	0/1:111,0:30:3.16:3,0,44	0/0:19,0:19:36.07:0,36,694	0/0:35,0:30:54.01:0,54,1530	0/0:63,0:60:99:0,126,3321	0/1:53,0:41:99:100,0,546	0/0:47,0:45:99:0,111,2997	0/0:50,0:45:99:0,108,2336	0/0:14,0:13:20.79:0,21,462	0/1:34,10:41:99:696,0,239	1/1:23,10:31:36.22:571,36,0	0/1:34,9:40:99:406,0,141	0/0:45,0:45:99:0,121,3011	0/0:45,0:44:99:0,105,2571	0/0:41,0:40:99:0,100,2651	0/0:27,0:26:69.18:0,69,1814	0/1:24,3:18:99:281,0,134	0/1:32,1:24:67.07:353,0,67	0/1:85,3:75:99:867,0,517	0/1:31,2:21:57.96:121,0,58	0/0:24,0:21:34.34:0,34,705	0/0:54,0:54:99:0,126,3276	0/0:25,0:25:60.17:0,60,1428	0/0:34,0:34:78.09:0,78,1691	0/0:40,0:37:99:0,104,2524	0/0:11,0:11:30.09:0,30,742
chr10	11772579	.	TGTCTGA	T	2479.30	PASS	AB=0.704;AC=14;AF=0.250;AN=56;BaseQRankSum=7.378;DP=1059;FS=1.199;HRun=0;HaplotypeScore=234.8867;InbreedingCoeff=0.8436;MQ=61.51;MQ0=50;MQRankSum=-10.111;QD=8.32;ReadPosRankSum=-1.456;VQSLOD=2.4943;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:52:99:0,111,3318	0/0:19,0:18:48.16:0,48,1397	0/0:60,0:24:54.44:0,54,1292	0/0:94,0:40:56.17:0,56,1627	0/0:28,0:22:44.30:0,44,1360	0/0:28,0:26:60.18:0,60,1803	0/0:34,0:33:54.19:0,54,1605	1/1:42,8:36:11.94:687,12,0	0/0:44,0:44:99:0,105,3182	0/0:46,0:42:99:0,99,2989	0/0:25,0:23:42.14:0,42,1391	1/1:17,24:40:17.59:376,18,0	1/1:10,23:33:39.61:835,40,0	1/1:14,18:30:14.64:321,15,0	0/0:37,0:37:76.57:0,77,2787	0/0:53,0:53:99:0,108,3287	0/0:32,0:32:72.25:0,72,2188	0/0:31,0:30:72.21:0,72,2184	0/1:9,3:8:28.06:178,0,28	1/1:11,24:32:9.44:148,9,0	1/1:57,3:51:11.47:115,11,0	0/1:12,22:27:0.02:0,0,0	0/0:19,0:18:42.12:0,42,1199	0/0:51,0:51:99:0,120,3582	0/0:15,0:14:24.08:0,24,801	0/0:41,0:39:87.29:0,87,2583	0/0:35,0:34:82.51:0,83,2458	0/0:10,0:10:24.08:0,24,642
chr10	11772833	.	G	GCA	493.93	PASS	AB=0.944;AC=5;AF=0.089;AN=56;BaseQRankSum=-1.047;DP=650;FS=39.786;HRun=0;HaplotypeScore=115.1440;InbreedingCoeff=0.7064;MQ=60.92;MQ0=8;MQRankSum=0.396;QD=6.50;ReadPosRankSum=-3.244;VQSLOD=0.9076;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,102,1234	0/0:12,0:12:30.10:0,30,380	0/0:13,0:4:3.01:0,3,39	0/0:22,0:12:21.06:0,21,251	0/0:21,0:21:42.12:0,42,515	1/1:5,19:27:22.76:355,23,0	1/1:10,19:31:17.74:233,18,0	0/0:28,0:28:20.17:0,20,396	0/0:27,0:27:47.69:0,48,534	0/0:29,0:29:75.19:0,75,919	0/0:19,0:19:39.09:0,39,466	0/0:30,0:30:43.96:0,44,521	0/1:16,0:17:33.52:34,0,208	0/0:17,0:17:13.23:0,13,294	0/0:29,0:29:65.88:0,66,805	0/0:26,0:26:42:0,42,509	0/0:33,0:32:69.21:0,69,847	0/0:24,0:24:48.02:0,48,573	0/0:18,0:18:45.11:0,45,543	0/0:17,0:16:27.07:0,27,321	0/0:22,0:22:33.10:0,33,412	0/0:24,0:24:24.27:0,24,197	0/0:20,0:19:36.11:0,36,447	0/0:30,0:30:60.17:0,60,728	0/0:24,0:24:48.14:0,48,594	0/0:19,0:19:36.10:0,36,440	0/0:14,0:14:42.07:0,42,483	0/0:10,0:10:24.07:0,24,295
chr10	11772844	.	TAC	T	4832.30	PASS	AB=0.735;AC=34;AF=0.654;AN=52;BaseQRankSum=-1.512;DP=699;FS=0.489;HRun=0;HaplotypeScore=111.0142;InbreedingCoeff=0.5059;MQ=58.85;MQ0=10;MQRankSum=0.623;QD=9.63;ReadPosRankSum=3.763;VQSLOD=4.2633;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:20,30:52:59.49:601,59,0	0/1:6,7:13:4.93:120,0,5	./.	./.	1/1:9,11:21:17.88:183,18,0	0/0:31,0:31:35.65:0,36,465	0/0:32,0:31:29.12:0,29,335	0/1:16,0:21:18.08:18,0,41	0/1:9,12:22:13.71:242,0,14	1/1:26,6:32:28.28:466,28,0	1/1:5,12:18:26.91:283,27,0	0/0:15,0:33:27.02:0,27,273	0/0:16,0:19:3.21:0,3,289	0/0:10,0:26:29.99:0,30,291	1/1:13,26:39:29.85:326,30,0	1/1:8,21:30:26.91:281,27,0	1/1:12,27:38:39.11:438,39,0	1/1:10,15:25:23.80:267,24,0	1/1:8,0:20:22.96:110,23,0	0/1:7,0:16:10.13:41,0,10	1/1:9,0:24:17.04:84,17,0	0/0:14,0:26:27:0,27,252	1/1:9,12:20:14.46:167,14,0	1/1:8,21:29:36.10:403,36,0	0/1:27,2:29:25.38:25,0,439	1/1:6,15:21:16.05:359,16,0	0/1:13,2:18:0.90:283,0,1	1/1:4,6:10:12.03:135,12,0
chr10	11774296	.	C	CA	433.21	PASS	AB=0.980;AC=3;AF=0.054;AN=56;BaseQRankSum=-0.939;DP=511;FS=4.059;HRun=8;HaplotypeScore=54.6404;InbreedingCoeff=0.5100;MQ=73.44;MQ0=6;MQRankSum=-0.736;QD=5.85;ReadPosRankSum=-0.801;VQSLOD=-0.1060;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:60.03:0,60,630	0/0:3,0:3:9:0,9,82	0/1:49,0:25:3.94:4,0,234	0/0:44,0:25:3.34:0,3,167	1/1:7,17:24:23.68:525,24,0	0/0:11,0:11:24:0,24,220	0/0:11,0:11:30:0,30,271	0/0:32,0:32:87:0,87,785	0/0:10,0:10:23.99:0,24,214	0/0:25,0:25:65.96:0,66,604	0/0:8,0:8:21:0,21,188	0/0:14,0:14:33:0,33,296	0/0:9,0:9:24.01:0,24,220	0/0:8,0:8:14.98:0,15,129	0/0:9,0:9:24.01:0,24,220	0/0:16,0:16:42.02:0,42,384	0/0:25,0:25:63.02:0,63,576	0/0:27,0:27:78.04:0,78,714	0/0:15,0:15:41.96:0,42,371	0/0:23,0:23:66.02:0,66,598	0/0:5,0:5:12.01:0,12,110	0/0:14,0:14:36:0,36,324	0/0:13,0:13:36.02:0,36,329	0/0:11,0:11:30.02:0,30,274	0/0:17,0:17:45.01:0,45,408	0/0:22,0:22:57.02:0,57,522	0/0:22,0:22:48:0,48,439	0/0:11,1:12:1.41:0,1,267
chr10	11779048	.	G	GC	23136.44	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=0.490;DP=708;FS=20.445;HRun=3;HaplotypeScore=114.2731;InbreedingCoeff=0.9965;MQ=80.19;MQ0=0;MQRankSum=-7.162;QD=35.81;ReadPosRankSum=4.984;VQSLOD=2.8851;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,37:38:99:1470,105,0	1/1:0,9:9:18.06:252,18,0	0/0:16,0:16:47.07:0,47,507	0/0:18,0:19:39.27:0,39,477	1/1:2,21:23:42.14:588,42,0	1/1:0,21:22:60.20:836,60,0	1/1:1,33:34:90.30:1255,90,0	1/1:3,28:31:84.27:1157,84,0	1/1:1,31:32:87.29:1218,87,0	1/1:1,29:30:81.27:1134,81,0	1/1:0,13:13:30.10:419,30,0	1/1:4,23:27:66.21:909,66,0	1/1:0,27:29:72.24:1001,72,0	1/1:0,26:26:72.24:1008,72,0	1/1:1,24:25:69.23:966,69,0	1/1:2,31:33:87.29:1218,87,0	1/1:3,26:29:72.24:1008,72,0	1/1:3,29:32:87.29:1218,87,0	1/1:2,16:18:45.14:614,45,0	1/1:2,19:21:48.12:647,48,0	1/1:4,39:43:99:1470,105,0	1/1:1,16:17:42.14:587,42,0	1/1:1,19:20:45.11:630,45,0	1/1:0,31:31:87.29:1218,87,0	0/0:27,0:27:75.23:0,75,900	1/1:1,20:21:57.19:798,57,0	1/1:1,29:30:81.27:1134,81,0	1/1:0,12:12:27.09:378,27,0
chr10	11779360	.	CGTGTGTCTACTT	C	15314.16	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=17.356;DP=813;FS=0.341;HRun=0;HaplotypeScore=288.4275;InbreedingCoeff=0.9972;MQ=75.79;MQ0=0;MQRankSum=-15.752;QD=52.45;ReadPosRankSum=-1.018;VQSLOD=3.8379;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,126,7092	0/0:11,0:11:33.11:0,33,1787	0/0:34,0:34:75.09:0,75,2945	0/0:16,0:15:36.12:0,36,1649	0/0:20,0:20:57.18:0,57,3137	1/1:4,17:22:36.12:1222,36,0	1/1:10,20:30:57.20:2046,57,0	1/1:10,15:25:39.12:951,39,0	0/0:37,0:37:96.32:0,96,5347	0/0:38,0:38:84.28:0,84,4770	0/0:22,0:22:57.20:0,57,3310	1/1:10,25:35:66.23:2352,66,0	1/1:14,23:38:54.19:1935,54,0	1/1:12,30:42:87.30:3116,87,0	0/0:42,0:42:99:0,117,6692	0/0:40,0:40:99:0,117,6269	0/0:41,0:41:99:0,99,5661	0/0:23,0:23:63.22:0,63,3771	1/1:5,14:19:42.12:1302,42,0	1/1:10,10:20:27.09:825,27,0	1/1:25,15:38:14.72:348,15,0	1/1:7,14:21:36.12:1217,36,0	0/0:20,0:20:54.19:0,54,3065	0/0:28,0:28:75.24:0,75,4082	0/0:23,0:23:66.23:0,66,3757	0/0:34,0:34:87.30:0,87,4731	0/0:28,0:28:69.20:0,69,3578	0/0:16,0:16:36.12:0,36,2110
chr10	11781592	.	GAA	G	10086.13	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=15.994;DP=657;FS=0.953;HRun=4;HaplotypeScore=83.4510;InbreedingCoeff=0.9984;MQ=87.37;MQ0=1;MQRankSum=-7.785;QD=40.02;ReadPosRankSum=1.492;VQSLOD=4.1977;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:78.22:0,78,1417	0/0:6,0:6:18.06:0,18,337	0/0:21,0:21:52.25:0,52,1029	0/0:24,0:24:66.22:0,66,1162	0/0:31,0:31:93.31:0,93,1699	1/1:0,21:21:63.21:928,63,0	1/1:0,24:24:57.19:840,57,0	1/1:3,33:36:99:1434,99,0	0/0:28,0:28:78.27:0,78,1452	0/0:27,0:27:75.26:0,75,1394	0/0:20,0:20:57.20:0,57,1059	1/1:0,26:26:78.26:1149,78,0	1/1:0,16:16:42.14:618,42,0	1/1:0,30:30:81.27:1193,81,0	0/0:32,0:32:87.29:0,87,1591	0/0:19,0:19:54.19:0,54,1011	0/0:19,0:19:57.20:0,57,1054	0/0:26,0:26:78.27:0,78,1436	1/1:1,22:23:66.22:972,66,0	1/1:2,27:29:72.24:1060,72,0	1/1:0,18:18:54.18:795,54,0	1/1:0,29:29:75.08:1098,75,0	0/0:12,0:12:30.10:0,30,562	0/0:23,0:22:63.22:0,63,1175	0/0:19,0:19:54.19:0,54,1012	0/0:36,0:36:99:0,105,1919	0/0:28,0:28:81.28:0,81,1493	0/0:8,0:8:24.08:0,24,450
chr10	11782715	.	C	CG	7760.91	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=11.702;DP=574;FS=2.858;HRun=1;HaplotypeScore=72.8200;InbreedingCoeff=0.9986;MQ=88.64;MQ0=0;MQRankSum=-0.859;QD=39.80;ReadPosRankSum=-0.370;VQSLOD=5.2701;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,135,1732	0/0:11,0:11:33.11:0,33,428	0/0:22,0:22:60.17:0,60,750	0/0:19,0:19:42.08:0,42,508	0/0:20,0:20:57.18:0,57,739	1/1:0,14:14:36.12:539,36,0	1/1:2,14:16:42.14:629,42,0	1/1:2,27:29:81.27:1212,81,0	0/0:16,0:16:48.16:0,48,621	0/0:23,0:23:57.18:0,57,740	0/0:15,0:15:39.13:0,39,506	1/1:0,19:19:51.17:764,51,0	1/1:0,22:22:63.21:943,63,0	1/1:4,21:25:57.19:853,57,0	0/0:17,0:17:45.15:0,45,584	0/0:24,0:24:63.20:0,63,818	0/0:31,0:31:87.12:0,87,1128	0/0:25,0:25:75.24:0,75,974	1/1:4,17:21:57.17:825,57,0	1/1:0,10:10:30.10:447,30,0	1/1:1,26:27:75.25:1123,75,0	1/1:2,10:12:30.07:426,30,0	0/0:15,0:15:39.08:0,39,487	0/0:31,0:31:90.29:0,90,1167	0/0:17,0:17:48.16:0,48,623	0/0:23,0:23:60.19:0,60,777	0/0:17,0:17:51.15:0,51,648	0/0:6,0:6:18.06:0,18,234
chr10	11782833	.	G	GC	2310.45	PASS	AB=0.775;AC=20;AF=0.357;AN=56;BaseQRankSum=-6.977;DP=532;FS=33.898;HRun=9;HaplotypeScore=54.7561;InbreedingCoeff=0.8473;MQ=71.70;MQ0=0;MQRankSum=0.851;QD=11.44;ReadPosRankSum=-4.342;VQSLOD=-0.4627;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:31:70.98:0,71,601	0/0:7,0:7:8.98:0,9,78	0/0:17,0:18:27.07:0,27,240	0/1:11,0:9:1.49:1,0,48	0/0:18,0:18:38.98:0,39,338	1/1:10,6:16:12.50:133,13,0	0/1:5,22:28:12.16:541,0,12	1/1:8,10:19:27.03:275,27,0	0/0:18,0:18:29.94:0,30,260	0/0:18,0:18:23.98:0,24,208	0/0:12,0:12:23.96:0,24,205	1/1:14,9:23:48.04:480,48,0	1/1:6,8:14:15.03:158,15,0	1/1:6,14:20:18.52:200,19,0	0/0:29,0:29:68.95:0,69,599	0/0:20,0:20:24.14:0,24,436	0/0:35,0:35:83.92:0,84,729	0/0:17,0:17:41.99:0,42,364	1/1:9,6:15:21.04:216,21,0	1/1:4,9:13:15:150,15,0	1/1:10,16:26:24.06:265,24,0	1/1:12,5:17:9.02:100,9,0	0/0:13,0:13:23.97:0,24,208	0/0:25,0:25:66.37:0,66,562	0/0:23,0:21:38.93:0,39,339	0/0:22,0:23:43.99:0,44,370	0/0:15,0:15:35.97:0,36,312	0/0:8,0:8:14.92:0,15,123
chr10	11784058	.	C	CTTCTCATGGCTGCCT	43268.22	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-0.573;DP=756;FS=13.123;HRun=0;HaplotypeScore=283.7084;InbreedingCoeff=0.9996;MQ=63.03;MQ0=4;MQRankSum=-20.149;QD=144.71;ReadPosRankSum=-3.652;VQSLOD=3.3171;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,126,5032	0/0:15,0:15:36.12:0,36,1569	0/0:30,0:29:76.89:0,77,2914	0/0:35,0:33:92.55:0,93,3283	0/0:31,0:31:68.78:0,69,2775	1/1:14,8:27:66.18:4163,66,0	1/1:32,9:43:99:6444,108,0	1/1:33,1:30:84.28:4885,84,0	0/0:26,0:26:75.26:0,75,3141	0/0:20,0:20:54.19:0,54,2393	0/0:23,0:23:51.17:0,51,2237	1/1:23,11:37:87.30:5556,87,0	1/1:19,10:34:84.29:5619,84,0	1/1:16,28:45:99:8512,126,0	0/0:37,0:37:99:0,105,4438	0/0:26,0:26:75.22:0,75,3233	0/0:27,0:27:69.24:0,69,2979	0/0:19,0:19:51.17:0,51,2172	1/1:12,3:14:39.12:2001,39,0	1/1:6,5:14:24:1258,24,0	1/1:17,5:25:39.05:2210,39,0	1/1:9,7:18:45.11:2621,45,0	0/0:17,0:17:42.14:0,42,1820	0/0:34,0:34:96.29:0,96,3736	0/0:11,0:11:30.10:0,30,1309	0/0:20,0:20:57.12:0,57,2137	0/0:21,0:21:60.20:0,60,2577	0/0:22,0:22:63.22:0,63,2760
chr10	11784423	.	AT	A	5398.72	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=12.419;DP=463;FS=5.432;HRun=1;HaplotypeScore=56.7163;InbreedingCoeff=0.9648;MQ=51.23;MQ0=3;MQRankSum=-10.355;QD=34.39;ReadPosRankSum=-3.699;VQSLOD=3.2912;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:33:84.17:0,84,1203	0/0:11,0:11:33.10:0,33,484	0/0:9,0:4:8.92:0,9,105	0/0:7,0:2:5.92:0,6,43	0/0:20,0:20:54.16:0,54,783	1/1:1,25:25:66.09:836,66,0	1/1:3,13:16:42.53:516,43,0	1/1:5,14:17:51.14:666,51,0	0/0:13,0:13:36.12:0,36,531	0/0:19,0:19:54.16:0,54,772	0/0:19,0:19:51.15:0,51,760	1/1:3,10:13:36.11:486,36,0	1/1:3,11:14:40.68:532,41,0	1/1:1,16:17:51.14:689,51,0	0/0:16,0:16:45.15:0,45,687	0/0:9,0:9:27.08:0,27,393	0/0:19,0:19:57.17:0,57,844	0/0:27,0:25:57.10:0,57,805	1/1:6,15:19:51.14:678,51,0	1/1:2,11:13:39.04:484,39,0	1/1:3,3:5:8.90:63,9,0	1/1:3,9:12:36.06:447,36,0	0/0:9,0:9:24.08:0,24,367	0/0:8,0:8:20.99:0,21,286	0/0:25,0:24:74.71:0,75,1065	0/0:24,0:24:69.15:0,69,966	0/0:30,0:29:89.58:0,90,1235	0/0:7,0:7:21.05:0,21,298
chr10	11786326	.	GTGTGTGTGTGTGTGTGTGTGTGTGTC	G	3429.87	PASS	AB=1.000;AC=16;AF=0.286;AN=56;BaseQRankSum=0.631;DP=688;FS=2.920;HRun=0;HaplotypeScore=347.5120;InbreedingCoeff=0.4854;MQ=58.31;MQ0=10;MQRankSum=-2.984;QD=13.04;ReadPosRankSum=0.942;VQSLOD=1.7464;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:44:12.30:0,12,260	0/0:13,0:13:9.02:0,9,157	0/0:21,0:14:5.75:0,6,63	0/0:28,0:16:18.05:0,18,233	0/0:22,0:22:6:0,6,85	1/1:4,22:26:11.93:606,12,0	1/1:17,0:17:24.92:295,25,0	0/1:33,0:32:58.26:152,0,58	0/0:17,0:17:30.03:0,30,801	0/0:32,0:32:68.66:0,69,1582	0/0:24,0:24:6.01:0,6,92	1/1:12,20:32:12.04:815,12,0	1/1:19,0:19:32.75:460,33,0	1/1:7,23:30:6.02:314,6,0	0/0:35,0:34:18.53:0,19,374	0/0:18,0:18:9.15:0,9,425	0/0:17,0:16:27.02:0,27,582	0/0:24,0:24:11.93:0,12,206	0/1:15,0:14:25.52:50,0,26	0/1:18,0:18:26.08:212,0,26	0/1:48,0:46:54.20:56,0,54	1/1:9,16:24:2.47:469,2,0	0/0:12,0:11:2.62:0,3,48	0/0:25,0:25:35.73:0,36,1379	0/0:33,0:32:69.22:0,69,6250	0/0:24,0:23:47.34:0,47,917	0/0:25,0:25:21.03:0,21,460	0/0:10,0:10:24.49:0,24,638
chr10	11786328	.	GTGTGTGTGTGTGTGTGTGTGTGTC	G	2964.91	PASS	AB=0.930;AC=18;AF=0.321;AN=56;BaseQRankSum=3.934;DP=680;FS=4.716;HRun=0;HaplotypeScore=318.0733;InbreedingCoeff=0.4343;MQ=56.49;MQ0=12;MQRankSum=-2.239;QD=10.05;ReadPosRankSum=0.270;VQSLOD=1.8623;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:44:12.94:0,13,204	0/0:13,0:13:9.01:0,9,125	0/1:23,0:12:13.98:14,0,37	0/0:30,0:15:18.04:0,18,220	0/0:21,0:21:6:0,6,59	1/1:26,0:26:10.59:512,11,0	0/1:17,0:17:14.04:31,0,14	1/1:17,13:29:54.10:453,54,0	0/0:15,0:15:27.01:0,27,591	0/0:31,0:31:49.52:0,50,1169	0/0:26,0:26:3.01:0,3,41	1/1:30,0:30:12.04:677,12,0	0/1:19,0:19:8.61:96,0,9	1/1:30,0:30:6.02:245,6,0	0/0:34,0:33:18.51:0,19,211	0/1:17,0:17:1.71:2,0,243	0/0:16,0:15:27.02:0,27,458	0/0:22,0:22:11.93:0,12,181	1/1:8,6:13:11.75:265,12,0	1/1:4,13:17:15.04:418,15,0	0/1:13,34:45:32.54:100,0,33	0/1:25,0:24:33.98:333,0,34	0/0:12,0:11:2.56:0,3,48	0/0:26,0:27:35.84:0,36,1260	0/0:33,0:32:69.21:0,69,5707	0/0:24,0:23:46.60:0,47,705	0/0:25,0:25:16.27:0,16,298	0/0:11,0:11:27.04:0,27,611
chr10	11786956	.	C	CA	1181.09	PASS	AB=1.000;AC=35;AF=0.833;AN=42;BaseQRankSum=2.987;DP=107;FS=13.324;HRun=0;HaplotypeScore=20.3081;InbreedingCoeff=0.4559;MQ=65.69;MQ0=19;MQRankSum=-0.899;QD=18.17;ReadPosRankSum=-4.848;VQSLOD=2.6875;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:2,3:3:3.01:44,3,0	1/1:0,2:2:3.01:43,3,0	0/0:9,0:6:18.04:0,18,234	0/0:4,0:3:9.03:0,9,126	./.	1/1:1,0:1:2.99:24,3,0	1/1:1,1:2:3.01:45,3,0	./.	1/1:0,1:1:2.98:22,3,0	1/1:1,3:3:9.03:133,9,0	1/1:0,3:3:6.02:89,6,0	1/1:0,2:2:3.01:41,3,0	1/1:2,3:3:6.02:85,6,0	1/1:0,2:2:3.01:43,3,0	1/1:2,0:2:5.99:48,6,0	1/1:2,2:4:3.01:41,3,0	./.	./.	1/1:3,5:6:12.02:160,12,0	1/1:3,1:4:8.99:90,9,0	./.	./.	0/1:6,0:5:0:0,0,0	./.	0/0:8,0:8:18.05:0,18,237	1/1:1,7:7:21.02:266,21,0	1/1:3,0:3:6.01:61,6,0	1/1:3,0:3:8.98:72,9,0
chr10	11787384	.	CT	C	3444.78	PASS	AB=0.643;AC=46;AF=0.821;AN=56;BaseQRankSum=-0.287;DP=427;FS=5.660;HRun=15;HaplotypeScore=51.5950;InbreedingCoeff=0.3219;MQ=65.64;MQ0=6;MQRankSum=0.391;QD=9.46;ReadPosRankSum=3.447;VQSLOD=2.9584;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,18:26:19:274,19,0	1/1:4,6:10:14.44:89,14,0	0/0:28,0:7:4.56:0,5,17	0/0:25,0:9:2.50:0,2,9	1/1:7,13:20:11.04:184,11,0	1/1:3,0:11:10.17:29,10,0	1/1:3,0:5:2.03:6,2,0	1/1:15,18:30:30.90:237,31,0	0/1:6,6:12:4.47:96,0,4	0/1:5,4:10:35.86:47,0,36	0/1:5,5:10:26.54:27,0,41	0/1:2,5:7:8.71:78,0,9	1/1:5,10:15:32.19:203,32,0	1/1:4,9:14:24.74:146,25,0	1/1:4,5:10:19.63:117,20,0	1/1:2,12:14:5.73:149,6,0	1/1:10,27:39:59.04:454,59,0	1/1:9,20:30:56.79:357,57,0	1/1:8,11:19:32.36:207,32,0	1/1:1,9:10:19.77:121,20,0	1/1:3,4:7:5.79:33,6,0	1/1:1,2:3:5.86:38,6,0	1/1:5,2:6:4.95:25,5,0	1/1:2,1:4:4.97:25,5,0	0/0:10,0:9:20.91:0,21,173	1/1:3,6:10:19.74:121,20,0	1/1:5,12:17:14.10:210,14,0	1/1:4,13:17:26.56:171,27,0
chr10	11788820	.	T	TAAAAACAAAAAC	5128.35	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-3.085;DP=839;FS=0.675;HRun=0;HaplotypeScore=270.9039;InbreedingCoeff=0.9977;MQ=66.95;MQ0=0;MQRankSum=-9.304;QD=82.72;ReadPosRankSum=0.144;VQSLOD=4.3240;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:90.29:0,90,2936	0/0:18,0:18:45.15:0,45,1409	0/0:21,0:17:24.08:0,24,640	0/0:19,0:17:24.05:0,24,584	0/0:28,0:28:66.23:0,66,2199	1/1:12,14:26:51.17:2973,51,0	1/1:25,10:36:42.12:2155,42,0	0/0:36,0:36:78.25:0,78,2476	0/0:31,0:31:66.17:0,66,1884	0/0:26,0:26:57.19:0,57,1924	0/0:27,0:27:69.24:0,69,2393	0/0:45,0:45:90.30:0,90,3021	0/0:32,0:32:66.21:0,66,2181	0/0:25,0:25:66.20:0,66,2162	0/0:42,0:42:90.27:0,90,2768	0/0:39,0:39:84.27:0,84,2832	0/0:29,0:29:71.95:0,72,2302	0/0:36,0:36:99:0,102,3238	0/0:26,0:26:45.13:0,45,1359	0/0:34,0:34:75.25:0,75,2387	0/0:30,0:30:66.20:0,66,2044	0/0:33,0:33:68.55:0,69,2049	0/0:25,0:25:60.19:0,60,1991	0/0:27,0:27:69.24:0,69,2277	0/0:22,0:22:57.20:0,57,1951	0/0:28,0:28:54.17:0,54,1748	0/0:47,0:48:99:0,120,3846	0/0:14,0:14:33.11:0,33,1160
chr10	11789552	.	TA	T	1092.52	PASS	AB=0.946;AC=10;AF=0.179;AN=56;BaseQRankSum=7.537;DP=582;FS=1.594;HRun=12;HaplotypeScore=61.6787;InbreedingCoeff=0.7623;MQ=70.09;MQ0=2;MQRankSum=2.033;QD=9.84;ReadPosRankSum=-3.589;VQSLOD=2.0126;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,1:28:51.68:0,52,655	0/0:9,0:9:21.04:0,21,213	0/1:22,3:20:20.04:20,0,228	0/1:17,0:14:10.06:10,0,77	0/0:30,0:31:80.93:0,81,783	0/0:23,0:23:48.10:0,48,487	0/0:19,0:19:57.08:0,57,564	1/1:4,14:18:41.79:325,42,0	0/0:19,1:20:32.77:0,33,440	0/0:19,1:21:18.68:0,19,353	0/0:17,0:17:42.08:0,42,422	0/0:23,0:22:56.98:0,57,547	0/0:9,0:8:23.81:0,24,193	0/0:14,2:16:21.84:0,22,397	0/0:31,0:31:84.04:0,84,814	0/0:29,0:29:72.14:0,72,731	0/0:16,0:16:34.86:0,35,331	0/0:24,0:25:62.98:0,63,601	1/1:2,18:20:53.76:413,54,0	1/1:2,17:19:41.65:308,42,0	1/1:2,10:12:23.91:186,24,0	0/0:23,1:24:33.87:0,34,523	0/0:10,0:10:24.05:0,24,243	0/0:20,0:20:54.11:0,54,548	0/0:28,0:28:59.88:0,60,719	0/0:27,0:27:69.10:0,69,679	0/0:27,1:27:53.60:0,54,696	0/0:17,0:17:33.07:0,33,335
chr10	11789779	.	AG	A	4953.90	PASS	AB=1.000;AC=49;AF=0.875;AN=56;BaseQRankSum=7.372;DP=498;FS=14.627;HRun=1;HaplotypeScore=113.1784;InbreedingCoeff=0.4593;MQ=54.60;MQ0=1;MQRankSum=-4.424;QD=11.06;ReadPosRankSum=2.436;VQSLOD=1.8743;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:32,0:31:73.59:463,74,0	1/1:5,0:5:12.80:80,13,0	0/0:23,2:12:9.01:0,9,170	0/1:22,0:11:12.01:12,0,56	1/1:22,2:22:41.31:247,41,0	0/1:21,0:21:99:110,0,170	0/1:16,0:16:99:102,0,118	1/1:27,0:26:37.10:276,37,0	1/1:14,0:14:30.50:159,31,0	1/1:25,1:26:58.24:392,58,0	1/1:19,0:19:44.85:284,45,0	1/1:12,0:11:20.73:103,21,0	1/1:18,0:16:35.61:182,36,0	1/1:15,0:14:31.34:193,31,0	1/1:15,1:16:33.15:192,33,0	1/1:14,1:14:33.45:202,33,0	1/1:16,1:15:28.58:163,29,0	1/1:13,0:13:26.13:143,26,0	1/1:18,0:17:4.53:116,5,0	1/1:18,1:19:39.75:245,40,0	1/1:7,0:7:15.41:92,15,0	1/1:8,1:9:15.96:84,16,0	1/1:9,0:9:21.57:142,22,0	1/1:16,0:16:19.16:155,19,0	0/0:25,0:25:63.37:0,63,566	1/1:24,0:21:48.01:276,48,0	1/1:19,4:22:53.81:348,54,0	1/1:11,0:10:27.64:192,28,0
chr10	11791298	.	TG	T	1893.72	PASS	AC=40;AF=0.741;AN=54;BaseQRankSum=1.660;DP=133;FS=5.617;HRun=8;HaplotypeScore=27.4087;InbreedingCoeff=0.7300;MQ=102.63;MQ0=0;MQRankSum=-4.201;QD=22.28;ReadPosRankSum=1.131;VQSLOD=3.0402;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,7:7:21.03:203,21,0	1/1:0,1:1:3:28,3,0	0/0:12,0:10:15.98:0,16,104	0/0:13,0:11:11.47:0,11,178	1/1:0,2:2:6.01:58,6,0	1/1:0,2:2:6.01:57,6,0	1/1:0,4:4:12.02:116,12,0	0/0:8,0:8:15.05:0,15,181	1/1:0,3:3:9.01:87,9,0	1/1:1,3:4:9.01:87,9,0	1/1:0,7:7:21.03:202,21,0	1/1:0,5:5:15.02:145,15,0	1/1:1,3:4:3.48:30,3,0	1/1:0,2:2:6.01:58,6,0	1/1:2,6:8:18.03:174,18,0	1/1:1,4:5:12.02:116,12,0	1/1:0,3:3:6.01:58,6,0	1/1:0,1:1:3:29,3,0	0/0:4,0:5:14.91:0,15,159	0/0:4,0:4:12.04:0,12,144	0/0:3,0:3:6.02:0,6,72	1/1:1,2:3:6.01:58,6,0	1/1:0,5:5:15.02:145,15,0	1/1:1,5:7:18.03:173,18,0	0/0:3,0:3:9.03:0,9,109	1/1:1,4:5:12:108,12,0	1/1:0,7:7:15.01:145,15,0	./.
chr10	11791812	.	C	CACAA	18212.83	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=1.789;DP=684;FS=8.593;HRun=0;HaplotypeScore=121.7482;InbreedingCoeff=0.9591;MQ=62.29;MQ0=4;MQRankSum=-0.905;QD=37.32;ReadPosRankSum=6.717;VQSLOD=3.9902;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,31:43:72.25:1762,72,0	1/1:2,5:8:12.04:294,12,0	0/0:37,0:26:36.12:0,36,577	0/0:33,0:29:32.24:0,32,485	1/1:10,25:36:72.20:1368,72,0	1/1:5,0:11:12.04:210,12,0	1/1:6,0:9:6.02:88,6,0	0/0:34,0:34:69.20:0,69,1006	1/1:11,20:31:45.15:1101,45,0	1/1:8,15:24:48.16:1102,48,0	1/1:4,14:17:39.13:735,39,0	1/1:7,23:31:50.85:1250,51,0	1/1:7,13:21:30.10:732,30,0	1/1:4,17:22:36.12:880,36,0	1/1:5,14:20:39.13:919,39,0	1/1:7,22:30:54.19:1324,54,0	1/1:11,15:28:38.72:861,39,0	1/1:10,13:23:24.05:537,24,0	0/0:21,0:21:42.13:0,42,656	0/0:24,0:24:42.14:0,42,680	0/0:21,0:21:51.17:0,51,825	1/1:10,11:21:33.11:644,33,0	1/1:5,6:11:9.10:221,9,0	1/1:10,18:29:45.15:1103,45,0	0/0:26,0:26:54.18:0,54,881	1/1:12,18:30:53.68:1103,54,0	1/1:6,24:32:57.20:1390,57,0	1/1:1,9:10:24.08:587,24,0
chr10	11793755	.	G	GTGTA	5145.63	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-11.828;DP=798;FS=1.494;HRun=0;HaplotypeScore=134.1361;InbreedingCoeff=0.9976;MQ=60.07;MQ0=5;MQRankSum=-0.317;QD=34.08;ReadPosRankSum=-2.099;VQSLOD=4.4218;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:22:43.68:0,44,672	0/0:17,0:17:39.12:0,39,609	0/0:29,0:20:21:0,21,275	0/0:25,0:22:32.86:0,33,424	0/0:27,0:27:57.19:0,57,932	0/0:35,0:35:87.25:0,87,1373	0/0:14,0:14:33.02:0,33,461	1/1:32,22:52:69.13:1197,69,0	0/0:19,0:19:48.14:0,48,741	0/0:31,0:31:75.22:0,75,1157	0/0:17,0:19:48.16:0,48,771	0/0:32,0:32:81.22:0,81,1247	0/0:34,0:34:84.21:0,84,1252	0/0:24,0:24:48.13:0,48,724	0/0:42,0:42:99:0,114,1776	0/0:36,0:36:87.23:0,87,1315	0/0:29,0:29:66.14:0,66,984	0/0:21,0:21:53.30:0,53,839	1/1:7,7:14:21.95:434,22,0	1/1:7,38:46:96.33:2348,96,0	1/1:12,19:31:41.01:1167,41,0	0/0:31,0:31:75.24:0,75,1213	0/0:23,0:23:57.15:0,57,858	0/0:22,0:22:51.09:0,51,759	0/0:25,0:24:51.17:0,51,840	0/0:37,0:37:90.28:0,90,1418	0/0:38,0:38:78.25:0,78,1246	0/0:15,0:15:30.10:0,30,495
chr10	11797053	.	CTATT	C	20954.85	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=14.662;DP=683;FS=1.380;HRun=0;HaplotypeScore=126.8727;InbreedingCoeff=0.9992;MQ=72.19;MQ0=3;MQRankSum=-5.226;QD=44.97;ReadPosRankSum=5.114;VQSLOD=5.4832;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,31:31:69.23:1267,69,0	1/1:0,15:15:42.14:796,42,0	0/0:17,0:17:48.15:0,48,1130	0/0:12,0:11:27.09:0,27,686	1/1:2,25:27:66.23:1248,66,0	0/0:23,0:23:69.24:0,69,1833	0/0:23,0:23:63.19:0,63,1553	0/0:34,0:34:93.32:0,93,2423	1/1:2,16:18:45.15:854,45,0	1/1:2,23:25:69.23:1261,69,0	1/1:0,20:20:54.18:998,54,0	1/1:2,27:29:75.26:1401,75,0	1/1:0,23:24:63.17:1169,63,0	1/1:2,27:28:63.05:1172,63,0	1/1:0,21:20:51.17:967,51,0	1/1:1,25:26:60.21:1138,60,0	1/1:0,34:34:87.30:1628,87,0	1/1:1,26:26:54.19:1023,54,0	0/0:21,0:21:60.17:0,60,1454	0/0:27,0:27:75.26:0,75,2024	0/0:29,0:29:87.30:0,87,2345	1/1:0,20:20:51.17:963,51,0	1/1:1,16:17:36.12:682,36,0	1/1:2,25:27:47.76:911,48,0	0/0:31,0:31:90.31:0,90,2365	1/1:4,25:29:75.20:1312,75,0	1/1:2,35:37:93.32:1766,93,0	1/1:0,9:9:21.07:398,21,0
chr10	11797583	.	AG	A	1470.69	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.734;DP=617;FS=7.535;HRun=1;HaplotypeScore=61.9727;InbreedingCoeff=0.9913;MQ=65.54;MQ0=1;MQRankSum=-0.504;QD=35.87;ReadPosRankSum=0.121;VQSLOD=3.3255;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,108,1694	0/0:5,0:5:15.05:0,15,236	0/0:18,0:16:48.16:0,48,734	0/0:17,0:16:48.16:0,48,730	0/0:25,0:25:75.26:0,75,1192	1/1:0,23:23:63.21:880,63,0	1/1:0,18:18:51.17:713,51,0	0/0:33,0:33:99:0,99,1553	0/0:14,0:14:39.13:0,39,615	0/0:22,0:22:66.23:0,66,1056	0/0:17,0:17:51.17:0,51,811	0/0:30,0:30:81.26:0,81,1267	0/0:20,0:20:60.19:0,60,924	0/0:21,0:21:63.20:0,63,982	0/0:23,0:23:66.22:0,66,1045	0/0:24,0:24:63.21:0,63,999	0/0:35,0:35:99:0,102,1630	0/0:15,0:14:45.15:0,45,715	0/0:29,0:29:87.30:0,87,1382	0/0:24,0:24:69.24:0,69,1103	0/0:35,0:35:99:0,102,1594	0/0:18,0:18:51.17:0,51,810	0/0:16,0:16:48.16:0,48,767	0/0:30,0:30:90.31:0,90,1421	0/0:16,0:16:48.16:0,48,766	0/0:23,0:23:69.22:0,69,1080	0/0:20,0:20:60.20:0,60,954	0/0:9,0:9:27.09:0,27,431
chr10	11797749	.	CT	C	4178.72	PASS	AB=0.762;AC=48;AF=0.889;AN=54;BaseQRankSum=-1.943;DP=517;FS=11.648;HRun=11;HaplotypeScore=70.5888;InbreedingCoeff=0.1319;MQ=42.59;MQ0=31;MQRankSum=-0.522;QD=8.26;ReadPosRankSum=0.997;VQSLOD=1.1021;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:13,14:25:20.79:172,21,0	1/1:4,5:9:11.94:98,12,0	0/0:6,0:1:0:0,0,0	./.	1/1:10,15:25:28.86:227,29,0	1/1:9,12:22:15.83:251,16,0	1/1:12,6:17:17.92:148,18,0	1/1:11,12:23:39.45:299,39,0	1/1:7,3:8:8.93:73,9,0	1/1:15,8:22:23.91:197,24,0	1/1:14,10:22:25.11:215,25,0	1/1:8,13:19:26.81:211,27,0	0/1:8,4:12:23.17:40,0,23	1/1:11,8:18:8.13:135,8,0	1/1:14,7:20:0.68:213,1,0	1/1:10,7:15:23.44:196,23,0	1/1:18,11:27:12.95:209,13,0	0/1:11,8:15:4.62:125,0,5	1/1:18,14:31:10.02:287,10,0	0/1:12,14:26:1.68:298,0,2	1/1:4,2:6:2.84:24,3,0	1/1:5,4:9:11.97:98,12,0	1/1:6,5:10:10.65:79,11,0	1/1:7,5:11:5.96:49,6,0	0/1:19,1:20:0.64:1,0,180	1/1:14,12:23:6.77:261,7,0	1/1:12,9:17:20.70:172,21,0	1/1:13,5:13:11.92:98,12,0
chr10	11798586	.	TAC	T	22322.42	PASS	AB=0.980;AC=51;AF=0.911;AN=56;BaseQRankSum=-0.339;DP=931;FS=5.975;HRun=0;HaplotypeScore=123.3988;InbreedingCoeff=0.7858;MQ=62.61;MQ0=11;MQRankSum=-2.944;QD=25.78;ReadPosRankSum=6.098;VQSLOD=5.8221;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,43:56:99:1500,120,0	1/1:1,8:9:21.07:263,21,0	0/1:47,1:28:14.56:15,0,613	0/0:47,0:30:60.22:0,60,850	1/1:2,27:29:69.22:862,69,0	1/1:2,24:26:57.16:713,57,0	1/1:6,25:33:63.03:764,63,0	1/1:7,26:33:75.23:924,75,0	1/1:5,36:41:90.29:1126,90,0	1/1:4,26:30:75.24:935,75,0	1/1:1,22:23:51.12:620,51,0	1/1:5,36:41:90.29:1126,90,0	1/1:5,25:30:69.22:857,69,0	1/1:9,25:34:66.21:825,66,0	1/1:8,36:44:87.28:1088,87,0	1/1:3,22:26:60.02:727,60,0	1/1:3,32:35:96.31:1200,96,0	1/1:3,21:24:21.86:640,22,0	1/1:5,21:26:63.18:768,63,0	1/1:5,22:27:48.11:582,48,0	1/1:10,54:65:99:1815,147,0	1/1:4,33:38:75.10:937,75,0	1/1:3,19:23:51.16:638,51,0	1/1:5,37:42:90.29:1125,90,0	0/0:18,0:18:51.17:0,51,839	1/1:7,32:37:64.31:1060,64,0	1/1:3,24:28:75.07:914,75,0	1/1:2,14:16:24.01:300,24,0
chr10	11813041	.	G	GT	2029.32	PASS	AB=0.611;AC=7;AF=0.125;AN=56;BaseQRankSum=-9.331;DP=600;FS=4.192;HRun=9;HaplotypeScore=64.1823;InbreedingCoeff=0.8616;MQ=77.74;MQ0=0;MQRankSum=-1.315;QD=19.33;ReadPosRankSum=-2.450;VQSLOD=3.1960;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,108,929	0/0:13,0:13:29.98:0,30,260	0/0:23,0:22:28.26:0,28,325	0/0:13,0:13:26.54:0,27,226	0/0:16,0:16:47.98:0,48,414	0/0:15,0:15:38.99:0,39,338	0/0:24,0:24:47.94:0,48,412	1/1:7,25:33:74.19:742,74,0	0/0:14,0:14:41.98:0,42,362	0/0:15,0:15:44.99:0,45,390	0/0:20,0:20:47.96:0,48,413	0/0:19,0:19:53.99:0,54,469	0/0:24,0:24:71.95:0,72,616	0/0:19,0:19:44.98:0,45,391	0/0:25,0:25:65.97:0,66,569	0/0:22,1:23:26.81:0,27,462	0/0:24,0:24:59.92:0,60,509	0/0:25,0:25:59.97:0,60,520	0/1:8,13:22:4.70:354,0,5	1/1:1,17:18:45.08:484,45,0	1/1:12,20:31:54.62:598,55,0	0/0:14,1:15:8.16:0,8,282	0/0:24,0:24:62.98:0,63,546	0/0:19,0:19:53.99:0,54,468	0/0:24,0:24:56.97:0,57,495	0/0:30,0:30:71.94:0,72,624	0/0:22,0:23:65.02:0,65,553	0/0:9,0:9:26.99:0,27,234
chr10	11813638	.	CTG	C	22533.61	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=13.583;DP=805;FS=36.131;HRun=0;HaplotypeScore=108.8253;InbreedingCoeff=0.9996;MQ=84.02;MQ0=3;MQRankSum=-6.180;QD=40.17;ReadPosRankSum=5.770;VQSLOD=3.2517;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,46:46:99:1988,135,0	1/1:1,10:11:30.10:442,30,0	0/0:22,0:22:66.18:0,66,1150	0/0:28,0:28:72.68:0,73,1233	1/1:2,20:22:57.19:821,57,0	0/0:24,0:24:63.22:0,63,1180	0/0:27,0:27:75.26:0,75,1393	0/0:35,0:35:99:0,102,1808	1/1:2,36:38:99:1502,102,0	1/1:4,34:37:99:1469,102,0	1/1:0,20:20:57.19:838,57,0	1/1:1,35:36:89.87:1325,90,0	1/1:1,30:31:78.26:1149,78,0	1/1:0,22:22:63.21:928,63,0	1/1:0,48:48:99:2121,144,0	1/1:1,32:33:87.29:1281,87,0	1/1:0,22:22:63.21:919,63,0	1/1:0,24:23:69.23:1002,69,0	0/0:22,0:22:63.21:0,63,1151	0/0:28,0:28:81.26:0,81,1478	0/0:36,0:36:99:0,108,2023	1/1:1,28:29:75.25:1102,75,0	1/1:2,21:23:51.17:740,51,0	1/1:1,30:30:84.28:1237,84,0	0/0:22,0:22:66.21:0,66,1204	1/1:0,43:43:99:1879,129,0	1/1:1,35:36:99:1436,99,0	1/1:0,8:8:24.08:353,24,0
chr10	11813935	.	G	GTGTGCATGCACATGCACATGCACA	118574.96	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-2.850;DP=900;FS=0.525;HRun=0;HaplotypeScore=494.8055;InbreedingCoeff=0.8996;MQ=55.13;MQ0=0;MQRankSum=-11.520;QD=146.57;ReadPosRankSum=4.594;VQSLOD=4.3972;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:36,7:45:44.88:4761,45,0	1/1:12,2:15:27.09:2244,27,0	0/0:15,0:15:39.12:0,39,1663	0/0:18,0:17:42.06:0,42,1551	0/0:19,7:29:0.84:0,1,3	1/1:26,13:42:60.21:6184,60,0	1/1:39,1:45:57.20:4956,57,0	1/1:25,0:25:66.22:4192,66,0	1/1:30,5:40:66.23:6866,66,0	1/1:30,1:37:99:9245,105,0	1/1:19,3:22:18.06:1949,18,0	1/1:35,9:52:75.26:7873,75,0	1/1:34,8:48:84.25:7937,84,0	1/1:39,13:54:90.31:9976,90,0	1/1:23,5:30:33.11:3366,33,0	1/1:22,10:35:54.19:6055,54,0	1/1:23,4:30:60.21:5016,60,0	1/1:15,5:24:48.16:4426,48,0	1/1:10,5:20:60.19:4143,60,0	1/1:25,5:35:15.05:1702,15,0	1/1:28,2:35:14.45:1359,14,0	1/1:26,7:34:26.37:2877,26,0	1/1:20,6:27:17.83:1563,18,0	1/1:24,3:28:24.08:2545,24,0	0/0:29,0:29:84.27:0,84,4696	1/1:36,5:45:99:11379,129,0	1/1:31,5:36:78.27:7631,78,0	1/1:4,0:4:6.02:330,6,0
chr10	11817962	.	TCA	T	2708.35	PASS	AB=0.761;AC=13;AF=0.232;AN=56;BaseQRankSum=-10.810;DP=758;FS=18.137;HRun=0;HaplotypeScore=199.9986;InbreedingCoeff=0.7218;MQ=57.72;MQ0=7;MQRankSum=0.734;QD=11.52;ReadPosRankSum=0.479;VQSLOD=2.0111;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:40:38.76:0,39,313	0/0:9,0:9:14.40:0,14,120	0/0:22,0:5:0:0,0,0	0/0:16,0:7:9.02:0,9,102	0/0:21,0:21:8.98:0,9,72	0/1:10,0:24:0.51:90,0,1	0/1:13,0:28:12.18:43,0,12	1/1:21,9:31:47.92:540,48,0	0/0:32,0:32:50.88:0,51,409	0/1:38,0:38:7.84:8,0,301	0/0:17,0:17:20.48:0,20,157	0/0:47,0:47:59.33:0,59,543	0/0:24,0:24:35.36:0,35,288	0/0:38,0:38:55.92:0,56,442	0/0:33,0:33:38.84:0,39,307	0/0:24,0:24:17.84:0,18,132	0/0:29,0:29:29.86:0,30,238	0/0:23,0:23:40.90:0,41,314	1/1:5,11:15:30.08:350,30,0	1/1:10,13:23:45.14:540,45,0	1/1:29,17:43:44.68:480,45,0	0/0:19,0:19:13.98:0,14,103	0/0:19,0:19:20.77:0,21,165	0/0:41,0:41:27.05:0,27,323	1/1:2,26:29:69.21:837,69,0	0/0:31,0:31:21.22:0,21,279	0/0:23,0:23:38.38:0,38,332	0/0:14,0:14:20.95:0,21,170
chr10	11817986	.	ACACG	A	2330.25	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-7.031;DP=757;FS=6.216;HRun=0;HaplotypeScore=223.6358;InbreedingCoeff=0.9782;MQ=55.49;MQ0=3;MQRankSum=-4.282;QD=14.47;ReadPosRankSum=-3.769;VQSLOD=2.2028;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:41:57.05:0,57,1106	0/0:15,0:15:23.34:0,23,489	0/0:14,0:4:11.93:0,12,171	0/0:15,0:7:14.66:0,15,157	0/0:16,0:16:14.65:0,15,290	1/1:6,18:24:36.12:583,36,0	1/1:7,21:28:18.53:290,19,0	1/1:13,17:30:51.16:780,51,0	0/0:36,0:36:72.25:0,72,1441	0/0:36,0:36:63.65:0,64,1189	0/0:17,0:17:28.31:0,28,485	0/0:48,0:48:77.92:0,78,1593	0/0:28,0:27:42.14:0,42,891	0/0:42,0:42:69.02:0,69,1373	0/0:32,0:32:45.15:0,45,895	0/0:25,0:25:33.06:0,33,554	0/0:26,0:26:36.12:0,36,708	0/0:22,0:22:47.11:0,47,841	1/1:13,3:15:22.97:307,23,0	1/1:7,10:17:18.06:300,18,0	1/1:20,26:43:15.05:257,15,0	0/0:19,0:19:27.05:0,27,485	0/0:22,0:22:23.43:0,23,417	0/0:36,0:36:53.17:0,53,1021	0/0:32,0:32:63.19:0,63,1306	0/0:31,0:31:65.23:0,65,1184	0/0:26,0:26:51.16:0,51,988	0/0:16,0:16:27.07:0,27,503
chr10	11821066	.	C	CG	4243.22	PASS	AB=0.649;AC=33;AF=0.589;AN=56;BaseQRankSum=-4.315;DP=293;FS=23.806;HRun=3;HaplotypeScore=40.5086;InbreedingCoeff=-0.0953;MQ=59.99;MQ0=14;MQRankSum=2.160;QD=18.13;ReadPosRankSum=1.635;VQSLOD=3.2020;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:4,8:11:17.94:192,0,18	0/0:3,0:3:3.01:0,3,36	0/0:24,0:4:12.03:0,12,132	0/0:22,0:13:3.04:0,3,158	1/1:3,3:6:7.27:86,7,0	0/1:4,2:5:30.05:36,0,30	0/1:19,24:38:99:625,0,344	0/0:4,0:4:9.01:0,9,96	1/1:0,3:3:6.02:84,6,0	1/1:1,9:9:21.07:294,21,0	0/1:3,4:6:23.94:114,0,24	0/1:1,7:8:17.92:192,0,18	1/1:1,6:6:18.06:250,18,0	0/1:1,3:4:26.94:75,0,27	0/1:4,3:7:59.87:72,0,60	1/1:1,4:5:9.03:126,9,0	1/1:3,19:20:15.06:634,15,0	0/1:2,8:9:44.89:267,0,45	0/1:6,0:3:3.30:3,0,31	1/1:0,1:1:3.01:42,3,0	0/1:11,28:37:99:334,0,170	0/1:4,3:6:14.76:113,0,15	1/1:4,1:3:3.01:42,3,0	0/1:2,9:11:41.83:301,0,42	0/0:5,0:5:12.04:0,12,142	0/1:3,5:8:20.93:153,0,21	1/1:0,3:3:9.03:126,9,0	1/1:2,2:4:6.02:84,6,0
chr10	11821128	.	C	CG	55.66	PASS	AC=4;AF=0.167;AN=24;BaseQRankSum=3.075;DP=161;FS=1.904;HRun=3;HaplotypeScore=57.2968;InbreedingCoeff=0.6934;MQ=69.62;MQ0=4;MQRankSum=-2.194;QD=11.13;ReadPosRankSum=-2.651;VQSLOD=0.8173;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:1,0:1:0:0,0,0	./.	0/0:20,0:9:8.59:0,9,185	0/0:13,0:4:11.39:0,11,108	./.	0/0:4,0:3:6.02:0,6,72	0/0:24,0:20:42.10:0,42,488	0/0:15,0:14:36.10:0,36,422	./.	./.	./.	./.	./.	./.	./.	./.	1/1:0,3:3:8.99:104,9,0	1/1:1,1:2:3.01:42,3,0	0/0:9,0:9:21.03:0,21,227	0/0:5,0:5:15.05:0,15,180	0/0:49,2:51:98.99:0,99,1185	./.	./.	./.	0/0:12,0:12:27.08:0,27,323	./.	./.	./.
chr10	11821159	.	C	CG	1364.90	PASS	AB=0.571;AC=27;AF=0.587;AN=46;BaseQRankSum=-0.074;DP=233;FS=0.000;HRun=3;HaplotypeScore=39.3987;InbreedingCoeff=0.7106;MQ=54.92;MQ0=9;MQRankSum=-0.501;QD=21.33;ReadPosRankSum=-2.765;VQSLOD=2.3250;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,4:4:6.02:84,6,0	./.	0/0:17,0:3:9.03:0,9,108	0/0:15,0:3:6.02:0,6,72	./.	0/0:6,0:5:6.02:0,6,72	0/0:20,3:19:39.10:0,39,454	0/0:13,0:13:33.03:0,33,377	1/1:1,0:1:3:25,3,0	1/1:1,3:2:2.99:23,3,0	./.	0/1:1,3:3:0:0,0,0	1/1:0,4:5:9.50:125,10,0	1/1:0,5:5:12.04:168,12,0	1/1:0,1:1:3.01:42,3,0	./.	1/1:0,12:10:21.03:272,21,0	1/1:0,7:7:18.06:251,18,0	0/0:16,0:13:36.11:0,36,432	0/0:7,0:7:21.06:0,21,251	0/0:55,1:55:99:0,102,1221	1/1:2,2:4:3.01:42,3,0	./.	1/1:2,2:4:6.02:84,6,0	0/0:5,0:5:9.03:0,9,108	1/1:2,0:2:3.01:41,3,0	1/1:1,6:7:18.06:252,18,0	1/1:2,2:4:11.98:126,12,0
chr10	11821509	.	G	GTTTTTA	33768.90	PASS	AB=0.857;AC=41;AF=0.732;AN=56;BaseQRankSum=12.290;DP=624;FS=3.629;HRun=0;HaplotypeScore=184.3164;InbreedingCoeff=0.9429;MQ=81.42;MQ0=0;MQRankSum=-18.333;QD=77.10;ReadPosRankSum=4.266;VQSLOD=5.2832;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,17:23:64.77:1861,65,0	1/1:3,7:9:18.06:588,18,0	0/0:22,0:22:63.13:0,63,1358	0/0:28,0:28:84.23:0,84,1703	1/1:5,8:13:29.50:817,29,0	1/1:11,18:29:67.41:2245,67,0	1/1:7,8:15:35.66:1220,36,0	0/0:32,0:32:93.30:0,93,2128	1/1:4,14:19:57.20:1735,57,0	1/1:8,16:22:55.21:1758,55,0	1/1:2,7:8:24.08:656,24,0	1/1:9,19:28:50.50:2141,50,0	1/1:8,17:25:72.25:2086,72,0	1/1:2,12:15:45.15:1374,45,0	1/1:10,18:28:73.75:2197,74,0	1/1:8,24:32:72.11:2656,72,0	1/1:6,12:18:42.91:1459,43,0	1/1:4,17:21:63.14:1824,63,0	0/0:18,0:18:51.17:0,51,1227	0/0:15,0:15:45.09:0,45,946	0/0:49,0:49:99:0,141,3398	1/1:5,11:13:38.34:965,38,0	1/1:5,10:15:36.12:968,36,0	1/1:7,13:20:44.97:1119,45,0	0/0:22,0:22:66.23:0,66,1601	1/1:11,23:34:86.36:2714,86,0	1/1:8,27:36:94.35:3049,94,0	0/1:5,1:6:1.68:336,0,2
chr10	11821511	.	G	GAT	15789.96	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=16.880;DP=624;FS=0.322;HRun=0;HaplotypeScore=212.9850;InbreedingCoeff=0.9937;MQ=82.01;MQ0=0;MQRankSum=-18.367;QD=36.38;ReadPosRankSum=3.860;VQSLOD=4.9389;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,17:26:59.70:814,60,0	1/1:3,7:10:23.91:316,24,0	0/0:22,0:22:66.22:0,66,947	0/0:29,0:29:81.20:0,81,1120	1/1:6,8:13:32.63:418,33,0	1/1:10,17:28:69.11:985,69,0	1/1:6,8:14:41.90:534,42,0	0/0:34,0:34:93.30:0,93,1324	1/1:7,14:21:44.96:734,45,0	1/1:10,16:23:66.11:907,66,0	1/1:6,7:11:29.75:348,30,0	1/1:10,19:29:87.25:1205,87,0	1/1:2,17:19:54.18:789,54,0	1/1:5,12:17:36.13:665,36,0	1/1:5,18:23:66.17:954,66,0	1/1:6,24:30:87.24:1271,87,0	1/1:7,12:19:48.16:696,48,0	1/1:6,17:23:60.20:909,60,0	0/0:18,0:18:54.14:0,54,771	0/0:15,0:15:42.13:0,42,598	0/0:50,0:50:99:0,138,2012	1/1:6,11:15:44.21:567,44,0	1/1:2,11:13:29.94:375,30,0	1/1:6,13:19:38.54:493,39,0	0/0:22,0:22:66.21:0,66,953	1/1:9,23:32:87.22:1272,87,0	1/1:7,27:34:81.67:1380,82,0	1/1:5,1:6:12.02:159,12,0
chr10	11821712	.	TA	T	1639.13	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.315;DP=747;FS=0.000;HRun=1;HaplotypeScore=73.9842;InbreedingCoeff=0.9999;MQ=71.10;MQ0=0;MQRankSum=-1.883;QD=34.88;ReadPosRankSum=-0.218;VQSLOD=3.2803;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,135,2158	0/0:13,0:13:39.11:0,39,598	0/0:28,1:28:80.64:0,81,1259	0/0:18,0:18:54.16:0,54,838	0/0:16,0:16:48.16:0,48,767	1/1:0,27:27:69.23:964,69,0	1/1:0,20:20:57.19:796,57,0	0/0:45,0:45:99:0,135,2078	0/0:22,0:22:66.20:0,66,1029	0/0:41,0:41:99:0,123,1967	0/0:22,0:22:63.21:0,63,1003	0/0:33,0:33:99:0,99,1536	0/0:19,0:19:54.18:0,54,863	0/0:16,0:16:42.13:0,42,648	0/0:32,0:32:93.28:0,93,1437	0/0:25,0:25:75.26:0,75,1198	0/0:28,0:28:78.24:0,78,1220	0/0:33,0:33:90.29:0,90,1407	0/0:21,0:21:63.20:0,63,960	0/0:20,0:20:57.19:0,57,911	0/0:22,0:22:66.19:0,66,1007	0/0:25,0:25:69.24:0,69,1103	0/0:34,0:34:93.32:0,93,1485	0/0:19,1:20:54.12:0,54,833	0/0:22,0:22:66.20:0,66,1029	0/0:37,0:37:99:0,111,1748	0/0:39,0:39:99:0,108,1725	0/0:19,0:19:57.19:0,57,911
chr10	11823031	.	T	TG	1764.67	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-6.771;DP=643;FS=11.282;HRun=8;HaplotypeScore=66.1010;InbreedingCoeff=0.9973;MQ=83.77;MQ0=0;MQRankSum=-1.836;QD=21.79;ReadPosRankSum=-4.418;VQSLOD=1.4707;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:87.04:0,87,796	0/0:16,0:16:48.03:0,48,439	0/0:25,0:25:37.44:0,37,388	0/0:18,0:18:36:0,36,327	0/0:33,0:33:93.01:0,93,841	0/0:0,0:17:32.59:0,33,96	0/0:3,0:12:18.33:0,18,54	1/1:4,18:22:48.07:508,48,0	0/0:25,0:25:66.03:0,66,604	0/0:18,0:18:45.02:0,45,412	0/0:17,0:17:32.99:0,33,298	0/0:14,0:14:36.02:0,36,330	0/0:31,0:31:81.03:0,81,741	0/0:36,0:36:99:0,99,904	0/0:23,0:23:62.99:0,63,565	0/0:25,0:25:66.03:0,66,604	0/0:30,0:30:90.05:0,90,824	0/0:30,0:30:81.04:0,81,741	1/1:5,13:18:39.11:448,39,0	1/1:3,13:16:36.11:415,36,0	1/1:5,20:25:48.14:554,48,0	0/0:26,0:26:69.03:0,69,632	0/0:27,0:26:81.04:0,81,741	0/0:21,0:21:60.03:0,60,549	0/0:21,0:21:60.03:0,60,549	0/0:29,0:29:72.04:0,72,659	0/0:23,0:23:60:0,60,544	0/0:9,0:9:27.01:0,27,247
chr10	11823925	.	AT	A	10297.85	PASS	AB=0.724;AC=46;AF=0.821;AN=56;BaseQRankSum=6.026;DP=546;FS=2.735;HRun=10;HaplotypeScore=58.0747;InbreedingCoeff=0.7978;MQ=64.67;MQ0=0;MQRankSum=-0.403;QD=21.06;ReadPosRankSum=1.264;VQSLOD=5.9286;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,19:21:53.99:469,54,0	1/1:1,7:8:14.99:130,15,0	0/0:9,1:8:9.02:0,9,97	0/0:7,0:5:7.49:0,7,94	1/1:3,28:31:77.94:671,78,0	0/0:15,0:15:45.08:0,45,484	0/1:9,1:10:5:5,0,178	1/1:9,27:36:80.90:693,81,0	1/1:2,15:17:38.98:339,39,0	1/1:5,21:26:62.94:536,63,0	1/1:0,27:27:77.84:667,78,0	1/1:4,24:28:62.98:547,63,0	1/1:1,13:14:35.99:313,36,0	1/1:1,11:12:32.99:286,33,0	1/1:0,17:17:38.99:339,39,0	1/1:3,18:21:50.98:443,51,0	1/1:3,27:30:71.98:625,72,0	1/1:4,20:23:47.99:417,48,0	1/1:0,9:8:24:208,24,0	1/1:2,20:22:53.97:469,54,0	1/1:0,9:9:26.99:234,27,0	1/1:1,11:12:29.90:246,30,0	1/1:2,22:24:56.98:495,57,0	0/1:1,6:7:0.73:135,0,1	0/0:25,0:25:60.16:0,60,660	1/1:2,30:32:86.97:755,87,0	1/1:1,30:31:83.98:729,84,0	1/1:0,21:21:62.99:547,63,0
chr10	11826230	.	TTG	T	254.19	PASS	AB=0.974;AC=15;AF=0.278;AN=54;BaseQRankSum=9.274;DP=605;FS=17.488;HRun=0;HaplotypeScore=106.4484;InbreedingCoeff=-0.2180;MQ=60.99;MQ0=15;MQRankSum=-7.941;QD=0.72;ReadPosRankSum=-4.295;VQSLOD=-0.4253;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:37:8.84:0,9,95	0/1:6,0:6:27.74:28,0,36	./.	0/0:21,0:13:3.01:0,3,37	0/0:15,0:15:15.05:0,15,213	0/1:17,3:20:59.47:59,0,242	0/1:25,4:28:37.24:37,0,328	0/0:15,0:14:8.50:0,9,27	0/0:14,0:13:14.96:0,15,194	0/0:26,0:26:29.90:0,30,349	0/0:4,0:4:6.02:0,6,85	0/1:27,0:27:44.67:45,0,123	0/1:32,1:33:65.27:65,0,316	0/1:31,1:31:47.42:47,0,144	0/1:29,1:30:37.75:38,0,67	0/1:15,0:15:14.78:15,0,56	0/1:25,0:23:19.26:19,0,32	0/1:27,0:27:9.51:10,0,154	0/1:21,0:20:3.34:3,0,24	1/1:11,0:11:2.84:14,3,0	0/1:64,0:63:0.13:0,0,0	0/0:19,0:19:11.96:0,12,142	0/0:8,0:7:15.05:0,15,210	0/0:31,1:30:6.89:0,7,64	0/0:16,0:14:27.06:0,27,355	0/1:13,0:11:17.24:17,0,33	0/0:18,0:17:10.51:0,11,127	0/0:10,0:9:21.03:0,21,261
chr10	11826252	.	GTGTGTGTGTGTCTGTC	G	1029.13	PASS	AB=0.901;AC=7;AF=0.130;AN=54;BaseQRankSum=-0.410;DP=616;FS=5.330;HRun=0;HaplotypeScore=195.3068;InbreedingCoeff=0.2640;MQ=52.48;MQ0=29;MQRankSum=-1.444;QD=6.60;ReadPosRankSum=-3.193;VQSLOD=2.0139;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:37:24.04:0,24,420	0/0:7,0:7:5.56:0,6,147	./.	0/0:18,0:7:13.91:0,14,161	0/0:15,0:15:24.08:0,24,647	0/0:19,0:19:39.13:0,39,2151	0/0:30,0:28:70.45:0,70,2806	0/1:20,0:16:3.49:548,0,3	0/1:15,0:14:10.77:11,0,622	0/0:23,0:23:65.25:0,65,1026	0/0:9,0:8:4.97:0,5,142	0/0:32,0:32:39.98:0,40,630	0/0:33,0:33:54.64:0,55,963	0/0:22,0:22:36.10:0,36,581	0/0:25,0:25:45.09:0,45,714	0/0:16,0:16:11.96:0,12,216	0/0:32,0:30:20.75:0,21,284	0/0:29,0:29:33.08:0,33,494	0/1:15,1:13:29.67:281,0,30	1/1:1,9:10:6.02:196,6,0	0/1:17,60:74:1.35:104,0,1	0/0:17,0:17:24.08:0,24,555	0/0:11,0:10:14.88:0,15,315	0/0:37,0:35:23.90:0,24,378	0/0:14,0:12:30.08:0,30,1392	0/1:18,0:15:14.59:15,0,506	0/0:17,0:16:8.40:0,8,270	0/0:10,0:9:24.08:0,24,562
chr10	11826258	.	GTGTGTCTGTC	G	3554.42	PASS	AB=0.952;AC=24;AF=0.429;AN=56;BaseQRankSum=9.306;DP=609;FS=31.975;HRun=0;HaplotypeScore=135.7498;InbreedingCoeff=-0.3681;MQ=52.48;MQ0=27;MQRankSum=-5.759;QD=7.07;ReadPosRankSum=6.302;VQSLOD=0.8975;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:33,1:33:42.63:43,0,62	0/1:2,5:7:15.04:45,0,15	0/0:6,0:3:8.95:0,9,123	0/0:16,0:5:11.83:0,12,167	0/1:15,0:15:45.65:46,0,178	0/0:18,0:18:23.41:0,23,1311	0/0:32,0:30:48.62:0,49,1948	1/1:18,0:15:9.46:313,9,0	0/1:14,1:14:99:197,0,162	0/1:24,0:24:99:204,0,273	0/0:9,0:8:5.49:0,5,85	0/1:31,2:33:99:346,0,117	0/1:30,2:32:99:356,0,307	0/1:24,2:26:99:255,0,121	0/1:25,0:25:50.28:239,0,50	0/1:16,1:17:52.06:123,0,52	0/1:28,1:28:28.53:149,0,29	0/1:27,1:28:99:139,0,150	0/1:18,0:15:8.16:294,0,8	1/1:10,0:10:6.02:113,6,0	1/1:67,0:64:6.02:69,6,0	0/1:18,0:18:20.89:21,0,125	0/0:11,0:10:12.48:0,12,151	0/1:36,0:34:33.37:33,0,53	0/0:14,0:12:27.06:0,27,767	0/1:17,1:15:36.42:415,0,36	0/1:20,0:19:46.56:47,0,111	0/1:13,0:12:99:109,0,237
chr10	11826260	.	GTGTCTGTC	G	6127.79	PASS	AB=1.000;AC=45;AF=0.804;AN=56;BaseQRankSum=5.120;DP=598;FS=7.763;HRun=0;HaplotypeScore=112.7297;InbreedingCoeff=0.7168;MQ=52.79;MQ0=26;MQRankSum=-4.585;QD=11.97;ReadPosRankSum=3.142;VQSLOD=2.8405;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:7,26:33:12.04:206,12,0	1/1:7,0:7:5.88:42,6,0	0/0:5,0:3:8.95:0,9,123	0/0:16,0:5:8.82:0,9,130	1/1:14,1:15:8.54:91,9,0	0/0:19,0:19:36.12:0,36,1063	0/0:32,0:30:73.11:0,73,1606	1/1:19,0:16:24.02:359,24,0	1/1:15,1:15:24.08:391,24,0	1/1:11,10:21:27.08:496,27,0	0/1:9,0:8:0:1,0,0	1/1:7,23:30:24.08:589,24,0	1/1:13,20:33:26.72:582,27,0	1/1:8,18:26:21.02:468,21,0	1/1:4,19:23:27.09:643,27,0	1/1:3,14:17:9.03:195,9,0	1/1:8,19:27:8.83:218,9,0	1/1:7,19:26:9.03:219,9,0	1/1:18,0:15:17.92:306,18,0	1/1:10,0:10:6.02:99,6,0	1/1:67,0:64:6.02:69,6,0	1/1:8,11:19:9.03:159,9,0	1/1:10,0:9:6:69,6,0	1/1:9,25:32:5.88:111,6,0	0/0:14,0:12:21.04:0,21,482	1/1:17,1:15:5.14:566,5,0	1/1:6,13:18:5.78:111,6,0	1/1:13,0:12:9.03:139,9,0
chr10	11826262	.	GTCTGTC	G	3970.33	PASS	AB=0.967;AC=25;AF=0.446;AN=56;BaseQRankSum=8.741;DP=581;FS=19.373;HRun=0;HaplotypeScore=104.1371;InbreedingCoeff=-0.2993;MQ=52.97;MQ0=26;MQRankSum=-6.043;QD=8.43;ReadPosRankSum=6.145;VQSLOD=0.0197;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:32:23.77:109,0,24	0/1:7,0:7:3.47:10,0,3	0/0:6,0:4:11.96:0,12,181	0/0:18,0:7:17.17:0,17,193	0/1:10,4:14:46.06:46,0,123	0/0:19,0:20:5.50:0,6,1017	0/0:33,0:31:75.72:0,76,1634	0/1:8,9:14:61.14:326,0,61	0/1:15,0:14:95.37:354,0,95	0/1:19,0:19:99:318,0,125	0/0:3,6:8:5.70:0,6,67	0/1:29,0:29:67.38:326,0,67	0/1:32,0:32:99:302,0,207	0/1:25,0:25:72.10:243,0,72	0/1:23,0:23:31.65:342,0,32	0/1:17,0:17:21.60:116,0,22	0/1:26,0:25:9.90:125,0,10	0/1:25,0:25:99:118,0,113	0/1:18,0:15:38.54:269,0,39	1/1:10,0:10:6.02:85,6,0	1/1:67,0:64:5.95:69,6,0	0/1:16,0:16:58.19:83,0,58	0/0:5,4:9:2.91:0,3,99	1/1:30,0:29:5.88:77,6,0	0/0:14,0:12:20.32:0,20,387	1/1:16,0:14:13.62:473,14,0	0/1:18,0:17:54.97:65,0,55	0/1:12,0:11:99:115,0,144
chr10	11826358	.	C	CT	862.56	PASS	AB=0.815;AC=8;AF=0.143;AN=56;BaseQRankSum=-1.716;DP=545;FS=1.200;HRun=12;HaplotypeScore=76.7651;InbreedingCoeff=0.3372;MQ=67.69;MQ0=10;MQRankSum=-0.463;QD=8.80;ReadPosRankSum=-3.386;VQSLOD=2.1495;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:31:60.83:0,61,474	0/0:13,0:14:27.95:0,28,199	0/1:12,0:9:6.99:7,0,29	0/0:17,0:13:9.93:0,10,46	0/0:10,0:11:14.84:0,15,109	0/0:22,0:21:44.66:0,45,324	0/0:24,1:24:10.96:0,11,343	0/1:13,11:23:26.73:238,0,27	0/0:19,0:20:13.64:0,14,243	0/0:24,0:24:32.68:0,33,257	0/1:9,1:10:20.30:20,0,35	0/0:24,0:23:42.11:0,42,306	0/0:22,0:22:38.72:0,39,284	0/0:24,1:25:37.55:0,38,268	0/0:20,0:21:48.99:0,49,341	0/0:20,0:20:27.48:0,27,191	0/0:29,0:30:66.64:0,67,467	0/0:22,1:24:0.26:0,0,153	1/1:10,9:20:19.44:307,19,0	0/1:7,7:14:16.41:176,0,16	1/1:10,7:18:29.79:258,30,0	0/0:10,0:11:2.07:0,2,135	0/0:16,0:16:20.81:0,21,153	0/0:22,0:22:40.67:0,41,290	0/0:12,0:12:26.81:0,27,195	0/0:11,0:12:19.79:0,20,136	0/0:23,0:24:61.70:0,62,443	0/0:11,0:10:10:0,10,55
chr10	11826991	.	C	CCTCT	12291.34	PASS	AB=0.579;AC=49;AF=0.875;AN=56;BaseQRankSum=4.054;DP=558;FS=20.269;HRun=0;HaplotypeScore=143.5949;InbreedingCoeff=0.8290;MQ=54.04;MQ0=5;MQRankSum=-5.347;QD=26.21;ReadPosRankSum=3.401;VQSLOD=3.1731;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,0:19:8.99:155,9,0	1/1:4,0:13:18.06:306,18,0	0/0:35,0:19:40.46:0,40,583	0/0:40,0:19:9.10:0,9,304	1/1:5,0:21:18.06:322,18,0	1/1:3,0:16:21.07:356,21,0	1/1:1,0:6:6.02:106,6,0	1/1:18,0:18:36.07:660,36,0	1/1:3,0:17:15.05:266,15,0	1/1:2,0:19:47.98:761,48,0	1/1:4,0:29:53.96:848,54,0	1/1:2,0:22:45.11:760,45,0	1/1:5,0:20:30.01:460,30,0	1/1:4,0:15:18.02:285,18,0	1/1:3,0:22:30.10:531,30,0	1/1:4,0:26:42.14:718,42,0	1/1:5,0:15:8.85:123,9,0	1/1:5,0:10:9.03:151,9,0	1/1:4,11:15:39.11:804,39,0	1/1:1,9:10:24.08:505,24,0	1/1:2,11:14:21.07:503,21,0	1/1:7,0:28:45.07:740,45,0	1/1:5,0:23:39.06:626,39,0	0/1:3,0:11:0.10:0,0,0	0/0:14,0:14:39.13:0,39,670	1/1:9,0:36:89.93:1290,90,0	1/1:9,0:34:48.11:761,48,0	1/1:1,0:9:15.05:254,15,0
chr10	11827014	.	CCCTT	C	2635.11	PASS	AB=0.947;AC=38;AF=0.704;AN=54;BaseQRankSum=8.219;DP=471;FS=40.951;HRun=0;HaplotypeScore=159.6000;InbreedingCoeff=0.6995;MQ=42.05;MQ0=18;MQRankSum=-7.183;QD=8.26;ReadPosRankSum=1.980;VQSLOD=0.9812;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:15,1:17:22.78:132,0,23	1/1:5,1:6:5.98:64,6,0	0/0:29,0:12:5.96:0,6,44	0/0:46,0:12:8.94:0,9,69	./.	1/1:14,0:12:14.93:142,15,0	1/1:5,0:5:3:25,3,0	0/0:20,0:19:39.04:0,39,364	1/1:15,0:15:14.83:112,15,0	1/1:15,0:15:22.97:191,23,0	1/1:22,1:23:14.34:105,14,0	1/1:19,1:20:26.66:209,27,0	1/1:15,0:15:23.77:189,24,0	1/1:10,0:10:5.91:38,6,0	1/1:21,0:20:14.80:97,15,0	1/1:23,1:24:39.83:320,40,0	0/1:11,0:11:0.59:77,0,1	1/1:6,0:7:8.81:63,9,0	0/0:11,0:10:15.02:0,15,139	0/0:11,0:9:15.79:0,16,113	0/0:12,0:12:15.40:0,15,130	1/1:24,1:25:20.63:142,21,0	1/1:22,0:22:5.90:37,6,0	1/1:9,0:8:5.88:36,6,0	0/0:13,0:13:24.02:0,24,244	1/1:26,0:25:52.96:423,53,0	1/1:24,1:25:32.76:341,33,0	1/1:8,0:7:8.93:79,9,0
chr10	11827053	.	TCCCTCC	T	2757.17	PASS	AB=0.981;AC=34;AF=0.607;AN=56;BaseQRankSum=6.835;DP=372;FS=30.185;HRun=0;HaplotypeScore=129.5089;InbreedingCoeff=0.5033;MQ=34.66;MQ0=15;MQRankSum=-3.734;QD=9.71;ReadPosRankSum=5.426;VQSLOD=1.0245;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:23,1:24:49.16:246,0,49	1/1:6,0:6:2.88:129,3,0	0/0:3,0:2:3.01:0,3,39	0/0:11,0:3:7.58:0,8,90	1/1:20,0:18:6.25:175,6,0	0/0:12,0:11:20.98:0,21,292	0/0:14,0:13:27.09:0,27,385	0/0:15,0:8:18.06:0,18,278	1/1:10,0:10:2.04:35,2,0	1/1:7,0:7:14.68:127,15,0	1/1:13,0:14:2.97:45,3,0	1/1:17,0:18:17.59:210,18,0	1/1:14,1:15:22.49:254,22,0	1/1:11,0:10:3.72:58,4,0	0/1:18,0:15:1.16:52,0,1	1/1:19,0:20:12.07:347,12,0	1/1:14,0:13:6.17:136,6,0	0/1:14,0:13:57.34:110,0,57	0/0:6,0:6:12.04:0,12,220	0/0:8,0:7:18.94:0,19,291	0/0:12,0:10:18.06:0,18,241	1/1:13,1:13:6.02:95,6,0	1/1:15,0:16:6.01:58,6,0	0/1:14,0:14:18.95:19,0,41	0/0:7,0:7:15.03:0,15,263	1/1:20,0:20:41.32:427,41,0	1/1:22,1:23:20.92:379,21,0	1/1:4,0:3:3.01:45,3,0
chr10	11827061	.	TCC	T	3218.29	PASS	AB=0.874;AC=34;AF=0.654;AN=52;BaseQRankSum=7.414;DP=421;FS=2.963;HRun=3;HaplotypeScore=124.0578;InbreedingCoeff=0.1472;MQ=37.23;MQ0=23;MQRankSum=-1.176;QD=8.82;ReadPosRankSum=2.241;VQSLOD=0.6004;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:22,5:25:17.53:294,0,18	1/1:10,1:10:12.88:136,13,0	./.	./.	1/1:18,7:21:23.76:257,24,0	0/0:14,0:13:26.90:0,27,281	0/0:16,0:15:15.49:0,15,364	0/0:17,0:10:11.47:0,11,85	1/1:14,1:15:3.27:53,3,0	1/1:7,3:9:14.48:110,14,0	1/1:14,2:15:7.82:36,8,0	1/1:14,4:18:28.38:273,28,0	1/1:17,2:19:27.87:253,28,0	1/1:15,1:15:23.38:174,23,0	0/1:17,5:20:13.61:141,0,14	0/1:16,7:22:3.37:256,0,3	1/1:13,3:15:17.86:175,18,0	0/1:10,4:13:23.99:135,0,24	0/1:7,0:5:31.56:32,0,46	0/1:9,1:9:32.79:33,0,60	0/1:12,1:11:24.79:25,0,59	1/1:13,3:15:9.03:108,9,0	0/1:18,2:19:2.82:121,0,3	0/1:11,4:15:17.48:125,0,17	0/0:7,0:7:18.02:0,18,264	1/1:16,4:19:26.85:316,27,0	1/1:24,4:28:32.75:322,33,0	0/1:4,0:3:13.85:14,0,18
chr10	11828583	.	AT	A	942.72	PASS	AB=0.810;AC=15;AF=0.268;AN=56;BaseQRankSum=-0.248;DP=618;FS=10.475;HRun=15;HaplotypeScore=99.2719;InbreedingCoeff=0.4839;MQ=68.41;MQ0=0;MQRankSum=-0.149;QD=4.05;ReadPosRankSum=1.569;VQSLOD=0.8904;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:28,8:39:43.95:44,0,354	0/0:11,0:13:29.68:0,30,239	0/0:16,0:12:11.96:0,12,94	0/0:15,0:13:9.17:0,9,58	0/0:28,0:31:29.48:0,29,350	1/1:4,0:23:30.51:88,31,0	1/1:4,0:17:22.36:65,22,0	1/1:13,18:34:56.03:337,56,0	0/0:21,2:24:29.91:0,30,363	0/0:19,0:22:37.83:0,38,335	0/0:17,1:20:15.68:0,16,266	0/0:22,1:23:31.64:0,32,382	0/0:15,3:18:10.72:0,11,214	0/0:18,0:19:41.95:0,42,357	0/0:19,3:24:10.16:0,10,312	0/0:18,0:20:42.68:0,43,350	0/0:21,1:24:28.97:0,29,327	0/0:24,4:31:6.39:0,6,504	0/1:13,13:27:9.49:191,0,9	1/1:10,13:23:32.05:211,32,0	1/1:2,11:12:0.20:127,0,0	0/1:12,2:13:14.57:15,0,128	0/0:18,1:20:32.96:0,33,242	0/1:20,2:23:0.43:0,0,258	0/0:17,0:18:35.97:0,36,308	0/1:15,5:20:38.05:38,0,194	0/0:26,3:29:32.26:0,32,482	0/0:12,2:17:6.28:0,6,286
chr10	11828840	.	A	AT	1280.58	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-1.597;DP=630;FS=0.000;HRun=1;HaplotypeScore=68.4039;InbreedingCoeff=0.9941;MQ=69.97;MQ0=17;MQRankSum=-3.755;QD=34.61;ReadPosRankSum=0.030;VQSLOD=3.3757;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:35:99:0,102,1323	0/0:9,0:8:24.06:0,24,297	0/0:22,0:15:44.63:0,45,541	0/0:16,0:13:18.71:0,19,333	0/0:30,0:29:72.19:0,72,901	1/1:3,18:21:57.14:826,57,0	1/1:2,14:14:39.13:577,39,0	0/0:21,0:20:57.18:0,57,728	0/0:22,0:22:63.20:0,63,818	0/0:31,0:30:81.14:0,81,1000	0/0:24,0:24:69.19:0,69,865	0/0:18,0:18:54.18:0,54,701	0/0:20,0:20:57.19:0,57,739	0/0:20,0:20:57.18:0,57,732	0/0:20,0:20:60.20:0,60,778	0/0:17,0:15:42.14:0,42,545	0/0:43,0:41:99:0,120,1525	0/0:26,0:26:75.19:0,75,952	0/0:16,0:15:42.13:0,42,532	0/0:10,0:10:24.06:0,24,297	0/0:34,0:31:90.27:0,90,1148	0/0:14,0:13:33.11:0,33,428	0/0:24,0:24:63.19:0,63,802	0/0:23,0:23:63.20:0,63,817	0/0:20,0:19:54.18:0,54,701	0/0:28,0:27:78.25:0,78,1012	0/0:26,0:26:72.23:0,72,934	0/0:22,0:22:63.20:0,63,817
chr10	11828883	.	TAGGAAGCGCAAGGCCCTGGG	T	1921.84	PASS	AC=4;AF=0.077;AN=52;BaseQRankSum=6.339;DP=446;FS=2.309;HRun=0;HaplotypeScore=209.3200;InbreedingCoeff=0.9803;MQ=49.28;MQ0=25;MQRankSum=-5.429;QD=91.52;ReadPosRankSum=0.290;VQSLOD=3.5808;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:27:78.23:0,78,6692	0/0:10,0:8:24.08:0,24,2193	./.	./.	0/0:25,0:24:63.12:0,63,5692	1/1:3,10:12:30.10:1414,30,0	1/1:3,5:5:12.04:623,12,0	0/0:13,0:10:30.10:0,30,1836	0/0:16,0:16:48.16:0,48,4465	0/0:25,0:23:63.22:0,63,5219	0/0:13,0:13:36.12:0,36,3226	0/0:14,0:14:42.13:0,42,2951	0/0:16,0:15:45.15:0,45,3885	0/0:14,0:14:39.09:0,39,2919	0/0:19,0:19:54.19:0,54,4400	0/0:15,0:12:33.10:0,33,2665	0/0:31,0:28:81.26:0,81,6689	0/0:22,0:22:63.22:0,63,5777	0/0:14,0:13:39.13:0,39,2832	0/0:9,0:9:24.08:0,24,2117	0/0:20,0:15:42.13:0,42,3532	0/0:12,0:11:27.09:0,27,1837	0/0:20,0:20:51.16:0,51,4105	0/0:15,0:15:39.13:0,39,3409	0/0:13,0:12:36.09:0,36,2736	0/0:15,0:14:42.14:0,42,3737	0/0:21,0:21:57.20:0,57,4972	0/0:17,0:16:48.16:0,48,4054
chr10	11828905	.	TC	T	222.71	PASS	AC=4;AF=0.077;AN=52;BaseQRankSum=6.356;DP=410;FS=0.000;HRun=1;HaplotypeScore=61.6073;InbreedingCoeff=0.9873;MQ=45.66;MQ0=27;MQRankSum=-6.125;QD=9.28;ReadPosRankSum=1.787;VQSLOD=1.0434;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:24:63.12:0,63,923	0/0:9,0:7:21.07:0,21,334	./.	./.	0/0:25,0:24:57.18:0,57,880	1/1:4,10:13:30.73:228,31,0	1/1:5,5:8:15.79:112,16,0	0/0:18,0:14:39.09:0,39,586	0/0:13,0:13:36.12:0,36,572	0/0:23,0:21:54.15:0,54,810	0/0:17,0:17:45.15:0,45,700	0/0:8,0:8:24.08:0,24,382	0/0:10,0:9:27.09:0,27,429	0/0:12,0:12:30.07:0,30,427	0/0:17,0:17:45.15:0,45,702	0/0:15,0:12:32.90:0,33,486	0/0:25,0:22:63.21:0,63,1003	0/0:19,0:19:51.17:0,51,809	0/0:17,0:15:35.97:0,36,511	0/0:10,0:10:30.10:0,30,469	0/0:17,0:13:33.10:0,33,500	0/0:13,0:12:29.93:0,30,416	0/0:17,0:17:39.03:0,39,565	0/0:16,0:16:33.07:0,33,492	0/0:11,0:10:29.97:0,30,417	0/0:14,0:13:39.09:0,39,593	0/0:18,0:18:48.16:0,48,758	0/0:15,0:14:39.11:0,39,594
chr10	11829595	.	C	CA	6390.96	PASS	AB=0.663;AC=41;AF=0.732;AN=56;BaseQRankSum=-1.186;DP=550;FS=7.411;HRun=12;HaplotypeScore=86.8552;InbreedingCoeff=0.0250;MQ=73.73;MQ0=1;MQRankSum=-1.798;QD=12.48;ReadPosRankSum=0.890;VQSLOD=4.5730;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:4,13:20:11.94:219,0,12	1/1:4,14:18:23.16:387,23,0	0/0:16,0:14:6.90:0,7,81	0/1:15,1:17:9.14:9,0,95	0/1:25,10:36:0.11:454,0,0	0/1:5,11:16:7.82:244,0,8	0/1:5,9:14:3.88:128,0,4	1/1:13,19:32:39.29:502,39,0	1/1:1,16:17:21.03:204,21,0	1/1:6,16:22:20.03:330,20,0	1/1:6,18:25:50.45:421,50,0	1/1:1,11:13:19.11:163,19,0	1/1:4,11:15:15.02:146,15,0	1/1:6,9:15:3:29,3,0	1/1:5,14:19:32.92:307,33,0	0/1:7,11:18:19.79:147,0,20	1/1:1,20:23:32.89:306,33,0	0/1:9,9:18:35.88:133,0,36	0/1:9,7:18:8.19:204,0,8	0/1:8,11:19:35.66:156,0,36	1/1:3,3:6:9.01:88,9,0	0/1:4,15:19:1.68:169,0,2	1/1:5,16:21:36.06:351,36,0	1/1:3,16:20:29.21:315,29,0	0/0:22,0:22:16.72:0,17,258	0/1:13,13:26:39.56:302,0,40	1/1:12,12:25:4.83:168,5,0	1/1:1,18:20:53.92:510,54,0
chr10	11833818	.	TTGTG	T	16261.34	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-1.253;DP=822;FS=2.528;HRun=0;HaplotypeScore=159.7886;InbreedingCoeff=0.8181;MQ=58.99;MQ0=4;MQRankSum=0.951;QD=21.89;ReadPosRankSum=2.743;VQSLOD=4.9171;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,31:51:59.98:952,60,0	1/1:1,6:7:8.60:145,9,0	0/0:24,0:16:5.99:0,6,69	0/0:27,0:19:7.62:0,8,175	1/1:6,9:16:26.99:379,27,0	1/1:12,1:25:18.19:93,18,0	1/1:11,0:29:33.77:153,34,0	1/1:20,11:32:33.10:501,33,0	1/1:8,25:34:62.57:981,63,0	1/1:14,17:32:54.16:827,54,0	1/1:8,7:15:17.98:234,18,0	1/1:7,23:35:69.17:1008,69,0	1/1:8,27:38:68.82:1056,69,0	1/1:14,20:35:42.14:648,42,0	1/1:11,18:31:41.75:696,42,0	1/1:6,19:29:60.16:905,60,0	1/1:10,29:40:75.24:1174,75,0	1/1:4,22:26:54.18:876,54,0	1/1:13,7:19:0.02:248,0,0	1/1:11,12:28:56.73:777,57,0	1/1:28,40:68:67.42:1292,67,0	1/1:5,14:22:33.11:514,33,0	1/1:4,10:15:27.04:388,27,0	1/1:17,28:46:47.46:757,47,0	0/0:9,0:27:60.21:0,60,1129	1/1:14,18:32:56.13:838,56,0	1/1:9,12:24:39.11:570,39,0	1/1:6,3:11:18.04:250,18,0
chr10	11835919	.	GGTAT	G	1802.20	PASS	AB=1.000;AC=19;AF=0.365;AN=52;BaseQRankSum=-7.564;DP=840;FS=0.000;HRun=0;HaplotypeScore=153.2807;InbreedingCoeff=-0.0497;MQ=73.70;MQ0=6;MQRankSum=0.450;QD=3.65;ReadPosRankSum=6.306;VQSLOD=2.1437;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:59,0:59:87.46:87,0,891	0/1:13,0:13:2.86:3,0,325	0/0:28,0:23:0:0,0,0	./.	0/1:39,0:39:21.69:22,0,753	0/0:28,0:28:48.10:0,48,938	0/0:30,0:30:21.02:0,21,351	./.	0/0:33,0:33:36.12:0,36,661	0/1:40,0:40:43.76:44,0,478	0/1:28,0:28:28.78:29,0,617	0/0:25,0:25:8.19:0,8,488	0/0:22,0:22:9.07:0,9,474	0/1:28,0:28:86.53:87,0,262	0/0:32,0:32:41.58:0,42,725	0/1:32,0:32:26.47:26,0,349	0/1:28,0:28:3.91:4,0,472	0/0:20,0:20:30.10:0,30,486	1/1:16,11:28:39.07:514,39,0	1/1:16,9:25:23.99:310,24,0	1/1:15,24:39:45.15:691,45,0	0/1:32,0:32:19.81:20,0,643	0/1:26,0:26:82.83:83,0,492	0/1:35,0:35:19.68:20,0,716	0/0:27,0:27:54.19:0,54,1249	0/0:29,0:29:31.31:0,31,537	0/1:25,0:25:18.76:19,0,380	0/1:17,0:17:7.90:8,0,238
chr10	11835968	.	G	GTATT	6158.96	PASS	AB=1.000;AC=20;AF=0.357;AN=56;BaseQRankSum=-9.364;DP=773;FS=21.311;HRun=0;HaplotypeScore=153.1845;InbreedingCoeff=-0.4003;MQ=63.28;MQ0=5;MQRankSum=-1.068;QD=11.47;ReadPosRankSum=-1.185;VQSLOD=3.0009;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:60,0:60:99:724,0,176	0/1:12,0:12:38.10:38,0,112	0/0:22,0:15:35.03:0,35,338	0/0:15,0:10:23.08:0,23,238	0/1:33,0:33:99:331,0,155	0/0:28,0:28:75.04:0,75,945	0/0:26,0:26:65.87:0,66,591	0/0:34,0:30:83.85:0,84,727	1/1:1,27:28:33.11:840,33,0	0/1:35,0:35:73.24:442,0,73	0/1:28,0:28:99:179,0,179	0/1:27,0:27:99:314,0,108	0/1:24,0:23:99:217,0,123	0/1:23,0:23:50.93:319,0,51	0/1:33,0:33:99:304,0,187	0/1:19,0:19:90.02:221,0,90	0/1:32,0:32:96.50:373,0,96	0/1:21,0:21:99:211,0,128	0/0:23,0:22:51.07:0,51,563	0/0:19,0:19:42.43:0,42,413	0/0:39,0:39:89.99:0,90,932	0/1:30,0:30:99:245,0,149	0/1:30,0:30:99:281,0,123	0/1:44,0:44:99:509,0,151	0/0:30,0:30:76.31:0,76,960	0/1:24,0:24:99:243,0,132	0/1:25,0:25:65.47:335,0,65	0/1:9,0:9:33.15:33,0,84
chr10	11836756	.	T	TC	504.85	PASS	AB=0.885;AC=14;AF=0.250;AN=56;BaseQRankSum=-3.409;DP=534;FS=4.042;HRun=10;HaplotypeScore=81.6431;InbreedingCoeff=0.6098;MQ=67.19;MQ0=12;MQRankSum=0.001;QD=3.66;ReadPosRankSum=-2.098;VQSLOD=0.0980;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:23.71:0,24,131	0/1:7,0:7:0.03:0,0,19	0/0:38,0:21:22.09:0,22,222	0/0:30,0:16:38.08:0,38,300	0/0:17,0:17:17.17:0,17,71	0/1:6,9:14:18.40:26,0,18	1/1:5,12:17:15.02:152,15,0	1/1:16,0:16:14.24:74,14,0	0/0:15,0:15:16.64:0,17,74	0/0:18,0:18:19.83:0,20,95	0/0:16,0:16:17.80:0,18,88	0/0:12,0:12:15.27:0,15,80	0/1:20,2:22:0.66:1,0,47	0/0:20,0:19:15.98:0,16,94	0/0:23,0:23:16.13:0,16,53	0/0:17,0:17:13.25:0,13,45	0/0:31,0:30:19.87:0,20,71	0/0:19,1:20:20.41:0,20,117	1/1:19,0:16:0.91:105,1,0	1/1:9,0:9:14.60:83,15,0	1/1:19,0:19:37.95:217,38,0	0/0:17,0:17:17.58:0,18,90	0/0:14,0:14:11.81:0,12,86	0/0:19,0:18:24.91:0,25,111	0/0:25,0:23:17.83:0,18,146	0/0:23,0:23:23.72:0,24,93	0/0:18,0:18:13.20:0,13,58	0/1:14,0:14:12.04:12,0,17
chr10	11836765	.	CCT	C	4128.97	PASS	AB=0.719;AC=35;AF=0.648;AN=54;BaseQRankSum=-4.604;DP=559;FS=5.897;HRun=0;HaplotypeScore=77.1810;InbreedingCoeff=0.8692;MQ=65.47;MQ0=16;MQRankSum=-1.176;QD=12.22;ReadPosRankSum=5.273;VQSLOD=2.2426;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:14,10:23:15.05:189,15,0	1/1:8,0:8:11.59:88,12,0	0/0:38,0:18:25.23:0,25,256	0/0:36,0:19:33.61:0,34,352	1/1:7,12:19:18.06:226,18,0	0/0:18,0:16:12:0,12,115	0/0:17,0:17:20.99:0,21,201	0/0:4,0:15:26.21:0,26,213	1/1:8,6:14:23.63:257,24,0	1/1:8,9:17:23.94:255,24,0	1/1:15,3:18:32.55:308,33,0	1/1:5,7:12:12.04:151,12,0	1/1:8,12:20:26.97:340,27,0	1/1:11,5:16:9.03:113,9,0	1/1:15,8:22:20.85:248,21,0	1/1:9,12:21:18.06:227,18,0	1/1:34,1:34:41.41:281,41,0	0/1:14,9:22:11.48:136,0,11	0/0:5,0:18:35.13:0,35,300	0/0:5,0:17:23.95:0,24,199	0/0:3,0:25:44.56:0,45,367	1/1:10,7:16:20.28:235,20,0	./.	1/1:7,11:17:24.08:303,24,0	0/0:19,0:17:11.40:0,11,155	1/1:5,19:24:47.57:501,48,0	1/1:9,6:15:17.88:196,18,0	1/1:11,2:12:6.02:76,6,0
chr10	11836766	.	CT	C	1460.84	PASS	AB=0.934;AC=25;AF=0.446;AN=56;BaseQRankSum=2.616;DP=529;FS=4.182;HRun=1;HaplotypeScore=75.9859;InbreedingCoeff=0.1206;MQ=65.53;MQ0=16;MQRankSum=-2.271;QD=4.28;ReadPosRankSum=6.553;VQSLOD=0.6276;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:21,3:23:40.58:41,0,66	0/1:8,0:8:10.35:69,0,10	0/0:38,0:18:36.64:0,37,365	0/0:36,0:19:50.08:0,50,475	0/1:15,4:19:4.69:59,0,5	0/0:13,0:11:11.87:0,12,91	0/1:16,0:16:0.84:1,0,107	0/0:13,0:13:9.34:0,9,212	1/1:13,1:14:1.22:112,1,0	0/1:14,1:15:20.19:97,0,20	0/1:16,2:18:11.40:149,0,11	0/1:12,0:12:31.77:36,0,32	1/1:17,3:20:28:145,28,0	0/1:15,1:15:22.38:22,0,53	1/1:18,4:21:19.29:95,19,0	1/1:17,1:18:17.78:84,18,0	1/1:35,0:34:39.66:205,40,0	0/1:21,0:20:30.47:30,0,78	0/0:18,0:15:9.63:0,10,251	0/0:16,0:16:23.97:0,24,215	0/0:24,0:24:44.06:0,44,398	0/1:13,3:15:40.26:55,0,40	0/0:13,0:13:11.83:0,12,86	0/1:16,1:16:20.20:78,0,20	0/0:17,0:15:20.28:0,20,204	1/1:24,0:24:24.53:259,25,0	0/1:13,1:14:4.75:67,0,5	0/1:11,1:11:0.85:38,0,1
chr10	11837498	.	C	CTTTT	7052.18	PASS	AB=0.599;AC=42;AF=0.750;AN=56;BaseQRankSum=-3.748;DP=527;FS=10.412;HRun=14;HaplotypeScore=116.6872;InbreedingCoeff=0.5354;MQ=72.28;MQ0=2;MQRankSum=-4.554;QD=16.36;ReadPosRankSum=-2.877;VQSLOD=1.3286;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:13,20:37:34.66:531,35,0	1/1:3,2:7:13.86:198,14,0	0/0:22,0:14:12.95:0,13,109	0/0:15,0:13:11.18:0,11,65	1/1:11,4:27:43.72:582,44,0	0/1:4,0:21:7.22:7,0,8	0/1:8,0:18:11.50:12,0,40	0/1:9,0:23:38.15:38,0,78	1/1:7,0:16:20.94:260,21,0	1/1:10,8:21:37.81:454,38,0	1/1:2,15:22:54.49:833,54,0	1/1:8,3:14:12.04:205,12,0	1/1:4,9:16:27.05:446,27,0	1/1:7,8:15:15.05:316,15,0	1/1:4,2:15:18.02:280,18,0	1/1:4,6:12:9.03:195,9,0	1/1:5,14:29:34.30:507,34,0	1/1:6,10:22:25.32:404,25,0	0/1:8,0:29:30.97:31,0,32	0/0:11,0:28:0.98:0,1,65	0/0:3,0:14:10.73:0,11,27	1/1:4,3:9:16.19:197,16,0	1/1:6,1:15:13.28:199,13,0	1/1:5,10:19:27.48:475,27,0	0/0:15,0:16:29.53:0,30,337	1/1:5,7:19:33:496,33,0	1/1:8,5:14:18.06:301,18,0	1/1:3,2:9:5.86:85,6,0
chr10	11838139	.	TG	T	9177.09	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=13.441;DP=602;FS=14.250;HRun=7;HaplotypeScore=142.1294;InbreedingCoeff=0.9927;MQ=84.56;MQ0=1;MQRankSum=-8.450;QD=23.84;ReadPosRankSum=7.289;VQSLOD=3.1090;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,30:32:84.16:844,84,0	1/1:0,6:6:18.04:182,18,0	0/0:24,0:22:51.14:0,51,619	0/0:38,0:34:77.90:0,78,903	1/1:1,18:19:39.07:392,39,0	0/0:15,0:15:36.12:0,36,452	0/0:24,0:24:66.21:0,66,830	0/0:23,0:23:60.19:0,60,754	1/1:2,16:18:42.08:423,42,0	1/1:2,22:24:66.12:657,66,0	1/1:4,13:17:25.59:267,26,0	1/1:0,20:20:57.11:574,57,0	1/1:4,22:26:57.10:574,57,0	1/1:4,21:25:45.07:453,45,0	1/1:1,19:20:51.10:514,51,0	1/1:2,20:22:48.08:478,48,0	1/1:1,19:20:54.09:537,54,0	1/1:3,19:22:57.11:573,57,0	0/0:19,0:19:48.15:0,48,588	0/0:10,0:10:24.08:0,24,302	0/0:38,0:38:99:0,99,1226	1/1:2,22:24:44.22:532,44,0	1/1:4,8:12:21.04:212,21,0	1/1:2,33:35:78.13:787,78,0	0/0:26,0:26:66.21:0,66,827	1/1:2,17:19:52.89:512,53,0	1/1:1,18:19:54.11:545,54,0	1/1:1,4:5:12.02:121,12,0
chr10	11838558	.	TCA	T	2659.06	PASS	AB=0.944;AC=16;AF=0.348;AN=46;BaseQRankSum=1.826;DP=341;FS=1.129;HRun=0;HaplotypeScore=106.7808;InbreedingCoeff=0.5347;MQ=99.03;MQ0=1;MQRankSum=-3.942;QD=16.94;ReadPosRankSum=-1.349;VQSLOD=3.3686;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:4,0:4:0:0,0,0	./.	0/0:34,0:35:75.95:0,76,1366	0/0:32,1:32:64.20:0,64,946	./.	0/0:18,0:18:51.17:0,51,918	0/0:23,0:23:66.23:0,66,1181	1/1:1,23:24:66.19:879,66,0	1/1:7,0:7:0.47:1,0,0	0/0:6,0:6:3.31:0,3,21	0/1:3,0:3:0:0,0,0	0/1:17,0:17:0.29:0,0,1	0/0:4,0:4:2.04:0,2,6	0/1:6,0:6:0.30:0,0,0	0/1:8,0:8:0.01:0,0,1	./.	0/0:4,0:4:4.07:0,4,11	0/0:6,0:6:8.61:0,9,46	1/1:3,19:22:60.15:793,60,0	0/1:3,14:17:14.66:261,0,15	1/1:8,30:38:61.27:849,61,0	0/1:7,0:7:0:0,0,0	./.	0/1:4,0:4:0:0,0,0	0/0:26,0:26:69.24:0,69,1235	0/0:10,0:10:20.94:0,21,67	0/0:5,0:5:6.23:0,6,18	./.
chr10	11838564	.	ATG	A	640.37	PASS	AB=0.972;AC=23;AF=0.500;AN=46;BaseQRankSum=7.906;DP=342;FS=64.831;HRun=0;HaplotypeScore=113.0291;InbreedingCoeff=0.5341;MQ=87.31;MQ0=1;MQRankSum=-9.493;QD=4.33;ReadPosRankSum=0.414;VQSLOD=-0.2113;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:3,1:4:0:0,0,0	./.	0/0:36,0:34:95.27:0,95,1805	0/0:32,0:30:66.99:0,67,1197	./.	0/0:17,0:17:51.18:0,51,1036	0/0:24,0:24:69.24:0,69,1376	0/0:26,0:26:48.12:0,48,282	1/1:7,1:8:0.47:1,0,0	1/1:6,0:6:18.04:187,18,0	0/1:3,0:3:0:0,0,0	0/1:16,1:17:0.29:0,0,1	1/1:4,0:4:3.01:31,3,0	0/1:6,0:6:0.30:0,0,0	0/1:8,0:8:0.01:0,0,1	./.	1/1:4,0:4:6.01:59,6,0	1/1:5,1:6:8.98:76,9,0	0/0:20,0:20:28.77:0,29,156	0/1:18,0:18:11.97:12,0,49	0/1:38,0:38:7.79:8,0,50	0/1:7,0:7:0:0,0,0	./.	0/1:4,0:4:0:0,0,0	0/0:25,0:25:69.71:0,70,1391	1/1:10,0:10:30.06:309,30,0	1/1:5,0:5:9.02:96,9,0	./.
chr10	11838576	.	ACG	A	1761.97	PASS	AB=0.603;AC=25;AF=0.500;AN=50;BaseQRankSum=2.285;DP=446;FS=25.474;HRun=0;HaplotypeScore=127.4100;InbreedingCoeff=0.3719;MQ=63.11;MQ0=1;MQRankSum=-3.696;QD=7.87;ReadPosRankSum=-0.378;VQSLOD=1.5355;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:2,8:10:2.44:43,2,0	1/1:4,0:4:5.68:87,6,0	0/0:34,0:32:64.03:0,64,1047	0/0:29,0:27:56.10:0,56,960	./.	0/0:19,0:19:18.95:0,19,112	0/0:25,0:25:23.40:0,23,173	0/0:32,0:32:65.49:0,65,751	1/1:2,9:11:0.47:1,0,0	0/1:5,8:13:10.93:426,0,11	1/1:0,7:7:6.02:89,6,0	0/1:1,18:19:0.29:0,0,1	1/1:6,4:10:8.81:71,9,0	0/1:1,12:12:0.30:0,0,0	0/1:1,13:14:0.01:0,0,1	./.	1/1:1,12:13:15:183,15,0	0/1:1,11:12:8.01:164,0,8	0/0:22,0:22:2.06:0,2,349	0/0:21,0:21:19.69:0,20,343	0/1:41,0:41:10.27:10,0,272	0/1:2,8:10:0:0,0,0	1/1:2,6:8:3.01:44,3,0	1/1:1,12:13:5.81:88,6,0	0/0:23,0:23:63.14:0,63,1076	0/1:6,13:19:4.86:544,0,5	0/1:2,5:7:5.03:159,0,5	./.
chr10	11838578	.	G	GCACACACA	4996.39	PASS	AB=0.958;AC=38;AF=0.760;AN=50;BaseQRankSum=2.867;DP=446;FS=31.243;HRun=0;HaplotypeScore=151.4717;InbreedingCoeff=0.7060;MQ=60.64;MQ0=1;MQRankSum=-8.456;QD=16.60;ReadPosRankSum=-3.075;VQSLOD=2.2105;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,0:11:2.32:24,2,0	1/1:4,0:4:5.83:52,6,0	0/0:34,0:32:21.09:0,21,751	0/0:28,0:26:49.90:0,50,961	./.	0/0:19,0:19:42.14:0,42,699	0/0:24,0:24:45.06:0,45,697	1/1:26,1:28:65.88:826,66,0	0/1:12,0:12:0:0,0,0	1/1:15,0:15:41.29:493,41,0	1/1:8,0:8:5.90:46,6,0	1/1:19,0:19:0.32:1,0,0	1/1:5,0:12:8.90:121,9,0	1/1:13,0:12:0.47:1,0,0	1/1:14,0:14:0.91:1,1,0	./.	1/1:12,0:13:14.99:170,15,0	1/1:12,0:12:12.99:140,13,0	1/1:17,2:20:44.70:747,45,0	1/1:6,12:21:33.10:862,33,0	1/1:33,4:39:37.56:598,38,0	0/1:10,0:11:0.20:0,0,0	1/1:8,0:8:2.99:24,3,0	1/1:15,0:15:5.89:50,6,0	0/0:22,0:22:54.14:0,54,1182	1/1:19,0:19:32.08:656,32,0	1/1:7,0:7:13.85:185,14,0	./.
chr10	11838590	.	ACG	A	1404.29	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=4.184;DP=521;FS=39.401;HRun=0;HaplotypeScore=134.9055;InbreedingCoeff=0.2444;MQ=59.32;MQ0=1;MQRankSum=-2.104;QD=8.51;ReadPosRankSum=6.528;VQSLOD=1.5454;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:8.94:0,9,62	0/1:5,0:5:3.11:3,0,38	0/0:35,0:32:34.77:0,35,1200	0/0:27,0:25:59.49:0,59,967	0/0:11,0:11:5.92:0,6,39	1/1:3,15:18:50.51:699,51,0	1/1:1,24:25:45.15:687,45,0	0/0:29,0:29:29.69:0,30,646	0/0:13,0:13:5.54:0,6,55	0/1:20,0:20:64.72:65,0,261	0/0:11,0:11:4.29:0,4,47	0/0:25,0:25:14.32:0,14,92	0/0:18,0:18:2.99:0,3,107	0/1:16,0:15:1.18:1,0,13	0/0:17,0:17:8.91:0,9,63	0/0:14,0:14:17.74:0,18,173	0/1:19,0:19:4.62:5,0,87	0/0:18,0:18:5.21:0,5,185	0/0:19,0:19:16.07:0,16,407	0/0:27,0:27:60.41:0,60,693	0/0:39,0:39:21.14:0,21,449	0/0:13,0:13:2.84:0,3,14	1/1:9,0:10:1.82:5,2,0	0/1:16,0:16:0.02:0,0,0	0/0:21,0:21:57.15:0,57,996	0/1:25,0:25:60.83:61,0,220	0/1:11,0:11:20.88:21,0,106	0/0:5,0:5:5.92:0,6,40
chr10	11839162	.	A	AG	13950.87	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-13.612;DP=530;FS=1.969;HRun=1;HaplotypeScore=57.1059;InbreedingCoeff=0.9978;MQ=73.41;MQ0=0;MQRankSum=-0.376;QD=39.97;ReadPosRankSum=6.493;VQSLOD=4.7961;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,27:29:69.21:1012,69,0	1/1:0,7:7:21.07:313,21,0	0/0:16,0:16:42.01:0,42,474	0/0:14,0:13:30.01:0,30,313	1/1:1,17:18:54.18:798,54,0	0/0:26,0:26:75.23:0,75,958	0/0:19,0:19:54.16:0,54,686	0/0:26,0:26:78.23:0,78,968	1/1:1,16:17:48.16:719,48,0	1/1:1,12:13:33.08:470,33,0	1/1:2,7:9:21.06:297,21,0	1/1:1,20:21:54.18:809,54,0	1/1:1,17:18:48.16:719,48,0	1/1:0,16:16:39.13:584,39,0	1/1:0,26:26:69.23:1034,69,0	1/1:1,26:27:78.26:1169,78,0	1/1:0,23:23:66.22:989,66,0	1/1:1,15:16:39.60:585,40,0	0/0:14,0:14:42.13:0,42,529	0/0:25,0:25:75.22:0,75,944	0/0:27,0:27:81.24:0,81,1024	1/1:0,18:18:51.17:763,51,0	1/1:0,10:10:21.07:313,21,0	1/1:3,29:32:86.50:1263,87,0	0/0:14,0:14:42.14:0,42,545	1/1:0,21:21:63.21:944,63,0	1/1:1,18:18:51.17:764,51,0	1/1:0,9:9:27.09:404,27,0
chr10	11840979	.	A	AAGG	18641.16	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-7.227;DP=577;FS=5.883;HRun=0;HaplotypeScore=67.9316;InbreedingCoeff=0.8974;MQ=63.18;MQ0=3;MQRankSum=-0.998;QD=35.99;ReadPosRankSum=2.226;VQSLOD=5.1942;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,19:24:42.14:864,42,0	1/1:13,0:13:24.08:371,24,0	0/0:20,0:13:9.82:0,10,121	0/0:19,0:13:15.08:0,15,327	1/1:7,24:33:69.10:1196,69,0	1/1:8,16:24:30.10:621,30,0	1/1:3,26:30:54.19:1119,54,0	1/1:7,17:23:47.91:880,48,0	1/1:2,11:13:18.06:373,18,0	1/1:8,21:30:66.23:1298,66,0	1/1:3,16:20:48.05:824,48,0	1/1:2,21:24:27.09:558,27,0	1/1:2,15:17:36.12:746,36,0	1/1:4,12:16:27.09:559,27,0	1/1:4,20:25:39.13:808,39,0	1/1:5,14:20:30.10:621,30,0	1/1:3,28:31:72.25:1491,72,0	1/1:4,27:31:56.78:1129,57,0	1/1:0,3:3:9.03:180,9,0	1/1:6,16:22:39.05:652,39,0	1/1:1,10:12:21.07:435,21,0	1/1:3,13:16:33.06:615,33,0	1/1:1,11:12:30.05:578,30,0	1/1:6,20:27:9.30:773,9,0	0/0:19,0:19:51.15:0,51,729	1/1:2,15:17:45.15:912,45,0	1/1:4,21:26:45.15:915,45,0	1/1:1,3:5:6.02:124,6,0
chr10	11840987	.	G	GGAA	10340.36	PASS	AB=1.000;AC=35;AF=0.625;AN=56;BaseQRankSum=9.821;DP=579;FS=6.428;HRun=0;HaplotypeScore=91.9397;InbreedingCoeff=-0.1459;MQ=62.12;MQ0=8;MQRankSum=0.401;QD=19.66;ReadPosRankSum=10.609;VQSLOD=2.5809;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:24:26.16:548,26,0	1/1:0,12:12:30.01:591,30,0	0/0:16,0:10:10.99:0,11,174	0/0:19,0:13:26.92:0,27,409	1/1:30,0:29:38.87:652,39,0	0/1:22,0:22:59.78:321,0,60	1/1:29,0:29:10.38:613,10,0	0/1:27,0:23:42.61:413,0,43	0/1:13,0:13:23.88:194,0,24	1/1:28,0:28:16.48:658,16,0	0/1:23,0:22:22.06:416,0,22	0/1:26,0:26:38.80:299,0,39	0/1:19,0:19:26.80:390,0,27	0/1:16,0:16:17.70:301,0,18	0/1:24,0:24:7.83:421,0,8	0/1:18,0:18:37.79:314,0,38	0/1:35,0:35:74.59:827,0,75	1/1:29,0:29:20.25:620,20,0	0/1:6,0:6:32.94:90,0,33	1/1:22,0:21:13.76:340,14,0	1/1:13,0:13:21.06:253,21,0	0/1:16,0:16:37.82:303,0,38	1/1:13,0:13:6.57:303,7,0	0/1:29,0:29:88.16:452,0,88	0/0:18,0:18:54.17:0,54,890	0/1:19,0:19:0.74:465,0,1	0/1:28,0:28:37.71:481,0,38	1/1:4,0:4:6.02:76,6,0
chr10	11842611	.	G	GA	268.94	PASS	AB=0.764;AC=4;AF=0.071;AN=56;BaseQRankSum=-1.844;DP=585;FS=11.801;HRun=11;HaplotypeScore=70.4090;InbreedingCoeff=0.0802;MQ=59.92;MQ0=5;MQRankSum=0.145;QD=4.89;ReadPosRankSum=-0.642;VQSLOD=0.4113;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,2:41:39.02:0,39,584	0/1:9,1:10:12.55:13,0,98	0/0:10,1:9:8.85:0,9,120	0/1:10,1:6:13.80:17,0,14	0/0:31,1:34:59.57:0,60,607	0/1:4,10:14:2.08:162,0,2	0/1:9,11:20:35.56:184,0,36	0/0:33,0:33:50.39:0,50,542	0/0:14,0:15:37.25:0,37,267	0/0:14,0:15:23.19:0,23,159	0/0:16,0:16:44.83:0,45,348	0/0:26,0:26:27.66:0,28,367	0/0:17,0:17:29.11:0,29,228	0/0:18,0:19:40.85:0,41,307	0/0:16,3:19:8.20:0,8,238	0/0:15,0:15:31.86:0,32,233	0/0:29,0:29:62.69:0,63,487	0/0:33,1:32:13.91:0,14,462	0/0:17,0:18:46.79:0,47,344	0/0:12,0:11:26.88:0,27,209	0/0:11,0:14:32.82:0,33,225	0/0:17,0:17:31.43:0,31,236	0/0:16,1:18:3.41:0,3,203	0/0:28,1:29:18.41:0,18,428	0/0:17,0:18:34.86:0,35,261	0/0:27,0:27:51.89:0,52,439	0/0:37,0:37:76.15:0,76,582	0/0:15,0:14:7.34:0,7,227
chr10	11843368	.	G	GTGGATGGTGGAA	35466.70	PASS	AB=0.600;AC=49;AF=0.875;AN=56;BaseQRankSum=-3.397;DP=791;FS=21.576;HRun=0;HaplotypeScore=215.3883;InbreedingCoeff=0.7690;MQ=71.00;MQ0=0;MQRankSum=-8.288;QD=48.99;ReadPosRankSum=0.673;VQSLOD=3.1088;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:26,22:54:48.08:1944,48,0	1/1:6,8:15:18.06:820,18,0	0/0:18,0:18:24.06:0,24,514	0/0:23,0:22:8.46:0,8,548	1/1:8,12:26:17.92:300,18,0	1/1:6,8:15:15.01:645,15,0	1/1:9,14:29:20.99:1082,21,0	1/1:23,0:32:57.06:1285,57,0	1/1:7,22:31:41.84:2198,42,0	1/1:12,14:31:60.17:1928,60,0	1/1:5,12:17:12.04:389,12,0	1/1:8,25:35:41.73:2370,42,0	1/1:8,21:37:48.08:2642,48,0	1/1:12,13:29:33.11:1935,33,0	1/1:10,19:35:60.16:3298,60,0	1/1:13,16:28:33.11:1471,33,0	1/1:14,16:33:30.10:1657,30,0	1/1:10,9:24:14.94:819,15,0	1/1:19,10:33:69.02:1948,69,0	1/1:8,11:24:36.04:1190,36,0	1/1:21,22:55:18.02:413,18,0	1/1:6,17:27:30.10:1152,30,0	1/1:4,10:16:8.55:392,9,0	1/1:13,11:30:27.05:1019,27,0	0/0:26,0:26:69.23:0,69,2166	1/1:15,20:42:99:3302,105,0	1/1:6,8:16:17.93:923,18,0	0/1:3,5:9:62.60:346,0,63
chr10	11845441	.	GT	G	4586.06	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=10.281;DP=718;FS=0.371;HRun=1;HaplotypeScore=70.2859;InbreedingCoeff=0.9992;MQ=83.69;MQ0=0;MQRankSum=-3.738;QD=38.54;ReadPosRankSum=0.482;VQSLOD=5.3077;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,144,2185	0/0:11,0:11:30.10:0,30,472	0/0:24,0:24:72.22:0,72,1059	0/0:21,1:22:42.71:0,43,844	0/0:19,0:19:45.14:0,45,689	0/0:27,0:27:81.23:0,81,1266	0/0:28,0:28:84.27:0,84,1320	1/1:3,28:31:90.29:1229,90,0	0/0:34,0:34:99:0,102,1581	0/0:31,0:31:93.29:0,93,1425	0/0:16,0:16:45.13:0,45,660	0/0:25,0:25:75.23:0,75,1148	0/0:35,0:35:99:0,105,1676	0/0:23,0:23:69.17:0,69,1027	0/0:35,0:35:99:0,105,1651	0/0:29,0:29:87.30:0,87,1387	0/0:31,0:31:93.32:0,93,1486	0/0:13,0:13:39.13:0,39,621	1/1:0,16:16:48.12:649,48,0	1/1:1,22:23:69.22:951,69,0	1/1:1,48:49:99:1757,126,0	0/0:25,0:25:75.07:0,75,1129	0/0:14,0:14:42.14:0,42,671	0/0:29,0:29:81.23:0,81,1261	0/0:18,0:18:54.17:0,54,830	0/0:23,0:23:60.19:0,60,919	0/0:30,0:30:90.31:0,90,1438	0/0:8,0:8:24.08:0,24,383
chr10	11846424	.	T	TA	2317.71	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-10.837;DP=736;FS=1.436;HRun=9;HaplotypeScore=83.7195;InbreedingCoeff=0.9870;MQ=72.70;MQ0=0;MQRankSum=-1.786;QD=22.50;ReadPosRankSum=-4.582;VQSLOD=2.1898;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,114,985	0/0:15,0:15:29.95:0,30,257	0/0:16,0:16:18.42:0,18,149	0/0:21,0:19:38.71:0,39,310	0/0:36,0:36:92.89:0,93,793	0/0:19,0:19:13.29:0,13,94	0/0:29,0:29:35.49:0,35,140	1/1:9,29:38:87.16:921,87,0	0/0:29,0:29:74.83:0,75,633	0/0:33,0:34:92.02:0,92,787	0/0:17,0:17:41.99:0,42,365	0/0:27,0:28:77:0,77,652	0/0:22,0:22:50.98:0,51,440	0/0:25,0:25:65.95:0,66,568	0/0:34,0:34:86.94:0,87,748	0/0:28,0:28:74.98:0,75,651	0/0:30,0:30:77.98:0,78,677	0/0:24,0:24:65.95:0,66,567	1/1:3,18:20:54.09:567,54,0	1/1:3,17:20:19.03:425,19,0	1/1:3,21:24:51.14:564,51,0	0/0:30,0:30:60.01:0,60,628	0/0:26,0:26:74.97:0,75,648	0/0:21,1:22:17.78:0,18,380	0/0:26,1:27:35.78:0,36,534	0/0:24,0:24:62.98:0,63,547	0/0:34,0:35:59.89:0,60,736	0/0:17,0:17:44.99:0,45,391
chr10	11846436	.	ATT	A	1001.93	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.250;DP=705;FS=3.688;HRun=4;HaplotypeScore=93.5278;InbreedingCoeff=0.9994;MQ=70.00;MQ0=0;MQRankSum=-2.967;QD=28.63;ReadPosRankSum=1.803;VQSLOD=2.7305;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,132,2407	0/0:12,0:12:36.11:0,36,624	0/0:10,0:10:30.10:0,30,503	0/0:19,0:17:48.08:0,48,754	0/0:35,0:35:99:0,105,1915	1/1:1,12:13:30.09:424,30,0	1/1:0,22:22:48.16:700,48,0	0/0:39,0:39:99:0,117,2181	0/0:25,0:25:72.24:0,72,1320	0/0:33,0:33:99:0,99,1801	0/0:20,0:20:57.20:0,57,1036	0/0:30,0:30:90.28:0,90,1578	0/0:17,0:17:48.16:0,48,889	0/0:25,0:25:75.25:0,75,1373	0/0:31,0:31:87.28:0,87,1599	0/0:30,0:30:90.29:0,90,1649	0/0:28,0:28:75.26:0,75,1366	0/0:26,0:26:72.20:0,72,1300	0/0:24,0:24:69.24:0,69,1290	0/0:20,0:20:54.17:0,54,968	0/0:25,0:25:57.20:0,57,1062	0/0:27,0:27:81.28:0,81,1516	0/0:27,0:27:81.28:0,81,1481	0/0:24,0:24:72.25:0,72,1336	0/0:25,0:25:69.21:0,69,1254	0/0:23,0:23:69.24:0,69,1288	0/0:33,0:33:87.30:0,87,1622	0/0:17,0:17:45.15:0,45,843
chr10	11846732	.	C	CT	1726.56	PASS	AB=0.895;AC=11;AF=0.196;AN=56;BaseQRankSum=-7.344;DP=601;FS=0.975;HRun=10;HaplotypeScore=62.6626;InbreedingCoeff=0.7713;MQ=66.37;MQ0=3;MQRankSum=-2.214;QD=14.51;ReadPosRankSum=-2.243;VQSLOD=3.3316;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,1:38:63.83:0,64,727	0/0:12,0:12:26.86:0,27,208	0/0:19,0:16:16.17:0,16,184	0/0:11,0:10:5.75:0,6,46	0/0:21,2:23:18.13:0,18,339	0/0:22,0:22:53.92:0,54,443	0/0:29,2:31:4.86:0,5,448	1/1:5,23:29:59.99:593,60,0	0/0:15,0:15:32.96:0,33,271	0/0:19,1:19:9.96:0,10,288	0/0:10,0:11:31.99:0,32,251	0/0:19,0:20:52.93:0,53,419	0/0:23,1:24:24.91:0,25,407	0/0:27,0:28:67.93:0,68,545	0/0:16,1:18:11.95:0,12,285	0/0:14,0:14:38.95:0,39,320	0/0:42,0:42:99:0,120,967	0/0:29,0:30:67.84:0,68,535	1/1:8,18:26:27.64:455,28,0	1/1:4,16:18:11.44:326,11,0	1/1:3,22:25:45.58:481,46,0	0/0:20,0:20:44.90:0,45,365	0/0:19,0:19:35.93:0,36,296	0/0:31,0:31:68.60:0,69,563	0/0:12,0:12:29.94:0,30,244	0/1:15,2:17:15.53:16,0,232	0/0:19,0:19:15.71:0,16,272	1/1:2,0:2:2.99:24,3,0
chr10	11850494	.	C	CT	608.23	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-3.661;DP=666;FS=2.663;HRun=9;HaplotypeScore=77.4818;InbreedingCoeff=0.9945;MQ=75.52;MQ0=8;MQRankSum=-1.491;QD=21.72;ReadPosRankSum=0.333;VQSLOD=4.4024;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:92.94:0,93,804	0/0:22,0:22:62.96:0,63,543	0/0:46,0:22:25.28:0,25,241	0/0:33,0:24:19.58:0,20,192	0/0:23,0:23:56.98:0,57,495	1/1:2,12:14:30.08:332,30,0	1/1:1,13:14:36.10:398,36,0	0/0:28,0:28:59.17:0,59,496	0/0:27,0:27:65.96:0,66,573	0/0:39,0:39:98.96:0,99,860	0/0:27,0:27:74.98:0,75,651	0/0:15,0:15:41.98:0,42,365	0/0:16,0:16:29.97:0,30,260	0/0:18,0:18:38.96:0,39,338	0/0:20,0:20:50.99:0,51,443	0/0:22,0:22:59.97:0,60,521	0/0:25,0:25:65.96:0,66,569	0/0:28,0:28:58.06:0,58,572	0/0:18,0:18:50.94:0,51,431	0/0:29,0:29:65.93:0,66,569	0/0:19,0:19:50.99:0,51,443	0/0:19,0:19:44.98:0,45,391	0/0:15,0:15:23.99:0,24,208	0/0:26,0:26:65.95:0,66,569	0/0:24,0:24:62.98:0,63,547	0/0:23,0:23:56.21:0,56,476	0/0:25,0:25:68.97:0,69,599	0/0:14,0:14:35.97:0,36,312
chr10	11854335	.	AT	A	8461.06	PASS	AB=0.893;AC=48;AF=0.857;AN=56;BaseQRankSum=-3.755;DP=635;FS=0.499;HRun=12;HaplotypeScore=82.5989;InbreedingCoeff=0.6921;MQ=75.03;MQ0=0;MQRankSum=-0.479;QD=14.84;ReadPosRankSum=3.456;VQSLOD=5.5824;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:12,26:40:37.39:430,37,0	1/1:2,15:18:43.85:331,44,0	0/0:20,1:18:25.08:0,25,234	0/1:10,1:8:18.78:19,0,21	1/1:3,21:24:29.01:370,29,0	0/1:11,1:13:10.87:11,0,225	0/0:34,3:37:31.65:0,32,670	1/1:10,14:24:35.78:278,36,0	1/1:3,22:25:12.86:432,13,0	1/1:3,16:19:47.39:371,47,0	1/1:2,5:7:14.92:116,15,0	1/1:2,22:24:50.76:394,51,0	1/1:1,21:25:65.88:482,66,0	1/1:8,19:27:25.84:368,26,0	1/1:4,21:25:23.43:364,23,0	1/1:6,27:33:71.55:557,72,0	1/1:9,31:40:80.53:627,81,0	1/1:3,19:23:55.82:423,56,0	1/1:11,13:25:13.36:277,13,0	1/1:6,24:30:28.52:409,29,0	1/1:2,19:21:50.79:395,51,0	1/1:4,16:20:39.69:303,40,0	1/1:2,13:16:40.86:308,41,0	1/1:7,22:31:41.35:451,41,0	0/0:7,0:7:15.02:0,15,147	1/1:4,7:11:17.87:139,18,0	1/1:3,25:28:35.29:457,35,0	1/1:2,7:9:10.47:149,10,0
chr10	11855307	.	T	TCACACACA	10446.19	PASS	AB=0.797;AC=46;AF=0.920;AN=50;BaseQRankSum=-1.941;DP=718;FS=0.000;HRun=0;HaplotypeScore=232.0463;InbreedingCoeff=0.3723;MQ=57.21;MQ0=6;MQRankSum=-4.182;QD=16.71;ReadPosRankSum=0.229;VQSLOD=3.8521;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:30,5:40:4.16:246,0,4	1/1:7,1:10:9.03:336,9,0	./.	./.	1/1:20,2:23:2.68:122,3,0	1/1:16,0:16:6.49:164,6,0	1/1:30,0:30:9.50:161,10,0	1/1:30,0:30:27.07:538,27,0	1/1:20,5:28:24.08:738,24,0	1/1:26,0:31:17.25:618,17,0	1/1:18,5:26:1.40:120,1,0	1/1:15,5:22:12.04:432,12,0	1/1:14,6:24:17.19:716,17,0	1/1:13,4:21:14.97:555,15,0	1/1:23,8:36:15.13:915,15,0	1/1:12,7:25:36.59:1175,37,0	1/1:15,6:24:17.88:544,18,0	1/1:15,10:27:21.07:711,21,0	1/1:19,0:19:10.26:109,10,0	1/1:27,0:27:6.02:94,6,0	1/1:31,0:30:12.02:230,12,0	1/1:17,1:24:4.07:242,4,0	1/1:25,1:27:6.75:265,7,0	0/1:20,5:27:0.35:0,0,1	0/0:24,0:27:42.11:0,42,898	1/1:34,0:33:45.12:1095,45,0	1/1:15,3:21:12.02:320,12,0	./.
chr10	11859428	.	TAACCACCAC	T	2264.82	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=0.308;DP=256;FS=7.695;HRun=0;HaplotypeScore=65.1324;InbreedingCoeff=0.8203;MQ=81.00;MQ0=3;MQRankSum=-0.339;QD=17.42;ReadPosRankSum=-0.805;VQSLOD=0.4477;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,0:12:29.94:242,30,0	1/1:4,0:3:8.99:74,9,0	0/0:30,0:22:57.27:0,57,546	0/0:22,0:16:41.27:0,41,464	1/1:3,0:5:14.87:109,15,0	0/0:16,0:16:47.79:0,48,377	0/0:13,0:13:38.88:0,39,317	0/0:15,0:15:45.02:0,45,413	1/1:6,0:6:14.99:172,15,0	1/1:3,0:3:8.98:78,9,0	1/1:3,0:3:8.99:75,9,0	1/1:0,8:8:6.02:183,6,0	1/1:0,7:7:3.01:92,3,0	1/1:4,0:4:11.80:77,12,0	1/1:0,0:8:5.73:35,6,0	1/1:3,0:3:8.91:65,9,0	1/1:15,0:13:38.62:290,39,0	1/1:4,0:4:11.99:101,12,0	0/0:5,0:4:9.01:0,9,82	0/0:3,0:3:9:0,9,81	0/0:16,0:16:47.83:0,48,387	1/1:9,0:9:20.86:160,21,0	1/1:2,0:2:5.99:50,6,0	1/1:0,12:12:3.01:94,3,0	0/0:6,0:6:14.28:0,14,125	1/1:0,0:8:23.12:167,23,0	1/1:14,0:14:41.85:333,42,0	1/1:3,0:3:8.98:73,9,0
chr10	11861435	.	AG	A	4173.70	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=10.241;DP=689;FS=9.360;HRun=2;HaplotypeScore=68.4725;InbreedingCoeff=0.9999;MQ=78.58;MQ0=0;MQRankSum=-2.500;QD=37.27;ReadPosRankSum=-1.008;VQSLOD=3.4291;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,135,2018	0/0:14,0:14:42.14:0,42,629	0/0:11,0:11:32.32:0,32,444	0/0:24,0:24:72.20:0,72,996	0/0:28,0:28:81.27:0,81,1214	0/0:29,0:29:87.27:0,87,1264	0/0:22,0:22:66.22:0,66,989	1/1:1,29:30:87.28:1130,87,0	0/0:25,0:25:75.23:0,75,1082	0/0:28,0:28:84.27:0,84,1225	0/0:15,0:15:45.15:0,45,674	0/0:20,0:20:60.19:0,60,881	0/0:24,0:24:72.23:0,72,1057	0/0:25,0:25:75.24:0,75,1103	0/0:27,0:27:81.27:0,81,1210	0/0:17,0:17:51.16:0,51,746	0/0:18,0:18:51.17:0,51,758	0/0:21,0:21:63.21:0,63,944	1/1:0,23:23:69.17:863,69,0	1/1:0,17:17:51.17:662,51,0	1/1:1,41:42:99:1519,117,0	0/0:28,0:28:84.28:0,84,1238	0/0:27,0:27:78.25:0,78,1149	0/0:32,0:32:90.30:0,90,1346	0/0:25,0:25:75.23:0,75,1101	0/0:34,0:34:99:0,99,1483	0/0:19,0:19:57.19:0,57,854	0/0:19,0:18:57.19:0,57,850
chr10	11862996	.	CGT	C	5706.37	PASS	AB=0.874;AC=45;AF=0.804;AN=56;BaseQRankSum=4.277;DP=493;FS=18.212;HRun=0;HaplotypeScore=110.3945;InbreedingCoeff=0.4731;MQ=58.92;MQ0=8;MQRankSum=-0.781;QD=13.12;ReadPosRankSum=1.202;VQSLOD=3.6386;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,18:23:3.47:26,3,0	1/1:5,3:8:18.05:213,18,0	0/0:9,0:6:9.02:0,9,122	0/0:20,0:14:20.97:0,21,216	1/1:18,8:26:36.27:392,36,0	1/1:13,8:21:23.56:514,24,0	1/1:8,10:18:9.03:108,9,0	1/1:10,12:20:26.90:418,27,0	1/1:9,7:16:29.88:334,30,0	0/1:11,4:15:12.26:273,0,12	0/0:1,7:8:3.01:0,3,46	1/1:13,7:20:42.10:477,42,0	1/1:3,12:15:3.01:33,3,0	1/1:3,13:16:9.02:103,9,0	1/1:4,10:13:8.89:107,9,0	1/1:9,3:12:3.01:36,3,0	1/1:18,4:22:28.60:297,29,0	1/1:9,12:20:37.88:505,38,0	1/1:19,2:19:30.52:287,31,0	1/1:7,0:7:2.49:10,2,0	0/1:27,1:27:32.83:44,0,33	0/1:11,2:13:0.14:0,0,0	1/1:3,15:19:6.26:73,6,0	1/1:12,6:18:30.06:338,30,0	0/0:21,0:21:2.56:0,3,487	1/1:7,14:21:44.93:517,45,0	1/1:23,4:27:43.15:474,43,0	1/1:2,8:10:12.02:126,12,0
chr10	11863010	.	T	TGC	1568.17	PASS	AB=0.976;AC=25;AF=0.446;AN=56;BaseQRankSum=-1.773;DP=509;FS=15.290;HRun=0;HaplotypeScore=125.9157;InbreedingCoeff=-0.0361;MQ=52.77;MQ0=14;MQRankSum=2.267;QD=4.31;ReadPosRankSum=1.237;VQSLOD=2.1857;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:25:8.67:0,9,59	0/1:8,0:8:14.94:26,0,15	0/0:11,0:3:9.03:0,9,138	0/0:32,0:12:24:0,24,285	1/1:21,0:21:14.29:105,14,0	0/1:21,0:21:59.48:59,0,92	0/0:19,0:19:5.86:0,6,102	1/1:26,1:25:8.89:274,9,0	0/1:17,0:17:4.14:40,0,4	0/1:14,0:15:47.34:47,0,128	0/0:9,0:9:5.51:0,6,54	0/1:18,0:18:12.18:103,0,12	0/1:15,0:15:1.59:2,0,62	0/0:17,0:16:2.85:0,3,27	0/1:13,0:12:7.02:7,0,8	0/0:11,0:11:0.47:0,0,1	0/1:24,0:24:17.56:53,0,18	0/1:22,0:20:33.76:34,0,53	1/1:9,10:17:1.44:296,1,0	1/1:1,7:8:2.63:57,3,0	0/1:13,17:30:26.32:314,0,26	0/1:17,0:17:0.49:0,0,1	0/1:16,0:16:0.10:1,0,0	1/1:20,0:20:6.85:84,7,0	0/0:20,0:20:5.66:0,6,534	0/1:16,0:16:13.64:81,0,14	0/1:26,0:26:1.63:132,0,2	0/1:10,0:10:1.58:2,0,43
chr10	11863012	.	TGC	T	3141.78	PASS	AB=0.910;AC=49;AF=0.875;AN=56;BaseQRankSum=6.425;DP=504;FS=8.270;HRun=0;HaplotypeScore=117.7151;InbreedingCoeff=0.1915;MQ=52.22;MQ0=15;MQRankSum=2.023;QD=6.41;ReadPosRankSum=0.333;VQSLOD=2.7521;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:25:9.12:57,9,0	1/1:8,0:8:20.06:107,20,0	0/0:14,0:3:2.09:0,2,33	0/1:29,0:9:7.69:8,0,12	1/1:21,0:21:33.83:167,34,0	1/1:20,0:20:39.81:287,40,0	1/1:19,0:19:19.85:116,20,0	1/1:27,0:25:22.41:325,22,0	1/1:17,0:17:28.68:158,29,0	1/1:13,0:13:0.92:158,1,0	0/1:10,0:10:15.26:15,0,17	1/1:18,0:18:39.20:209,39,0	1/1:16,0:16:14.40:91,14,0	1/1:16,0:15:11.59:70,12,0	1/1:13,0:12:11.57:63,12,0	1/1:3,8:11:2.96:19,3,0	1/1:25,0:25:31.13:167,31,0	1/1:22,0:20:56.80:316,57,0	1/1:20,0:18:16.32:161,16,0	1/1:9,0:9:6.88:52,7,0	0/1:30,0:29:19.52:40,0,20	0/1:3,14:17:0.35:0,0,0	1/1:16,0:16:5.92:28,6,0	1/1:19,0:19:25.06:123,25,0	0/1:19,0:19:5.75:6,0,337	1/1:16,0:16:30.88:219,31,0	1/1:23,0:23:40.50:212,40,0	1/1:10,0:10:14.42:95,14,0
chr10	11863243	.	T	TAGAC	38004.58	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=-12.612;DP=739;FS=1.056;HRun=0;HaplotypeScore=103.7702;InbreedingCoeff=0.9992;MQ=88.99;MQ0=2;MQRankSum=-7.720;QD=68.72;ReadPosRankSum=5.680;VQSLOD=7.1688;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,36:44:99:2987,114,0	1/1:0,6:7:21.07:565,21,0	0/0:41,0:41:99:0,102,1795	0/0:21,0:21:51.13:0,51,844	1/1:6,24:31:81.28:2040,81,0	1/1:0,21:23:60.21:1618,60,0	1/1:2,18:21:51.18:1312,51,0	0/0:26,0:25:69.23:0,69,1263	1/1:2,27:29:75.26:1994,75,0	1/1:10,24:33:87.30:2294,87,0	1/1:1,18:21:57.20:1484,57,0	1/1:2,23:25:69.24:1861,69,0	1/1:2,17:20:45.15:1214,45,0	1/1:2,18:21:45.15:1199,45,0	1/1:3,26:29:78.22:2034,78,0	1/1:3,24:27:81.28:2158,81,0	1/1:3,23:26:72.25:1928,72,0	1/1:1,15:16:45.15:1214,45,0	0/0:20,0:20:60.21:0,60,1140	0/0:30,0:30:84.29:0,84,1595	0/0:31,0:31:87.26:0,87,1604	1/1:6,26:33:87.30:2241,87,0	1/1:1,29:30:84.29:2264,84,0	1/1:7,23:32:81.28:2136,81,0	0/0:17,0:17:45.15:0,45,847	1/1:4,28:34:99:2462,99,0	1/1:5,30:35:72.25:1874,72,0	1/1:0,14:14:42.14:1128,42,0
chr10	11864379	.	TTTATTA	T	644.35	PASS	AC=8;AF=0.148;AN=54;BaseQRankSum=-2.079;DP=270;FS=0.000;HRun=0;HaplotypeScore=67.8513;InbreedingCoeff=0.5094;MQ=69.20;MQ0=1;MQRankSum=-1.598;QD=11.11;ReadPosRankSum=-2.135;VQSLOD=1.3187;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:27.09:0,27,842	0/0:9,0:9:15.05:0,15,486	0/0:5,0:3:0.47:0,0,1	./.	0/0:12,0:12:18.06:0,18,540	0/0:4,0:7:5.88:0,6,37	0/0:3,0:6:5.88:0,6,37	1/1:25,10:35:30.09:547,30,0	0/0:3,0:3:6.02:0,6,194	0/0:7,0:7:6.02:0,6,196	0/0:7,0:7:6.02:0,6,196	0/0:5,0:5:3.01:0,3,98	0/0:6,0:6:6.02:0,6,151	0/0:6,0:6:6.02:0,6,192	0/0:4,0:4:3.01:0,3,98	0/0:10,0:10:12.04:0,12,392	0/0:28,0:28:54.66:0,55,1656	0/0:18,0:18:27.09:0,27,882	1/1:8,1:9:3.01:40,3,0	1/1:4,3:7:6.02:124,6,0	1/1:6,1:7:3.01:62,3,0	0/0:8,0:8:5.99:0,6,120	0/0:9,0:9:9.03:0,9,294	0/0:4,0:4:3.01:0,3,98	0/0:12,0:12:12.04:0,12,392	0/0:11,0:11:21.07:0,21,684	0/0:10,0:10:12.04:0,12,392	0/0:7,0:7:6.02:0,6,192
chr10	11865014	.	G	GAA	1938.60	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-0.171;DP=463;FS=0.476;HRun=10;HaplotypeScore=60.4261;InbreedingCoeff=0.9097;MQ=66.79;MQ0=15;MQRankSum=1.524;QD=18.46;ReadPosRankSum=-3.550;VQSLOD=1.4195;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:30:80.09:0,80,802	0/0:7,0:7:21.05:0,21,214	0/0:18,0:8:7.55:0,8,118	0/0:18,0:11:5.08:0,5,92	0/0:28,0:28:68.07:0,68,657	1/1:3,0:19:24.95:88,25,0	1/1:6,0:12:12.48:44,12,0	1/1:12,16:29:75.59:915,76,0	0/0:7,0:8:5.74:0,6,113	0/0:20,0:18:42.06:0,42,427	0/0:14,0:12:32.43:0,32,313	0/0:12,0:12:36.07:0,36,359	0/0:9,0:9:18.02:0,18,181	0/0:8,0:8:23.99:0,24,225	0/0:12,0:11:27:0,27,260	0/0:10,0:9:21.02:0,21,213	0/0:30,0:30:80.70:0,81,782	0/0:26,0:26:63.64:0,64,601	1/1:7,12:17:38.93:494,39,0	1/1:3,11:13:30.10:427,30,0	1/1:5,4:7:12:154,12,0	0/0:9,0:9:24.02:0,24,237	0/0:9,0:9:18.03:0,18,183	0/0:4,0:4:9:0,9,92	0/0:25,0:25:66.06:0,66,648	0/0:16,0:18:32.94:0,33,435	0/0:13,0:14:35.79:0,36,347	0/0:26,0:26:56.80:0,57,624
chr10	11865909	.	GA	G	1823.01	PASS	AB=0.784;AC=39;AF=0.696;AN=56;BaseQRankSum=1.897;DP=450;FS=3.590;HRun=16;HaplotypeScore=55.9168;InbreedingCoeff=0.1688;MQ=62.43;MQ0=16;MQRankSum=2.713;QD=4.66;ReadPosRankSum=7.663;VQSLOD=1.1101;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:13,18:31:39.96:233,40,0	1/1:5,6:11:14.58:90,15,0	0/1:16,1:11:5.80:6,0,49	0/0:13,0:8:0.37:0,0,41	1/1:8,9:20:24.40:135,24,0	0/0:19,0:18:26.66:0,27,183	0/0:14,0:14:18.41:0,18,112	0/1:11,4:14:35.36:35,0,140	1/1:5,15:20:26.37:161,26,0	1/1:9,4:14:8.99:46,9,0	1/1:9,2:11:10.69:59,11,0	0/1:8,7:16:3.48:75,0,3	1/1:3,7:10:11.63:72,12,0	1/1:4,12:15:17.49:108,17,0	1/1:5,6:12:7.39:40,7,0	1/1:5,10:15:20.58:126,21,0	1/1:11,13:28:26.37:219,26,0	0/1:4,8:16:8.12:70,0,8	0/0:9,0:7:5.16:0,5,70	0/1:13,3:15:12.13:12,0,114	0/1:8,2:10:19.64:20,0,62	1/1:10,2:14:12.69:65,13,0	0/1:10,2:12:8.85:55,0,9	1/1:6,11:19:11.31:166,11,0	0/1:17,3:20:14.88:15,0,159	0/1:8,2:10:15.32:20,0,15	1/1:2,11:15:5.38:130,5,0	1/1:7,2:6:5.86:36,6,0
chr10	11869282	.	G	GT	1444.36	PASS	AB=0.613;AC=43;AF=0.896;AN=48;BaseQRankSum=-0.433;DP=223;FS=13.370;HRun=1;HaplotypeScore=82.2877;InbreedingCoeff=0.0762;MQ=23.39;MQ0=1;MQRankSum=-0.666;QD=6.75;ReadPosRankSum=1.220;VQSLOD=-0.6499;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/1:3,5:7:8.59:70,0,9	./.	./.	1/1:6,5:6:7.58:44,8,0	0/1:5,6:7:0.29:39,0,0	1/1:2,2:3:4.14:12,4,0	1/1:3,4:5:3.41:44,3,0	1/1:2,13:10:19.26:181,19,0	1/1:7,2:5:0.22:14,0,0	1/1:8,11:13:6.50:89,6,0	1/1:3,4:6:9.46:83,9,0	1/1:2,7:8:15:147,15,0	1/1:3,4:6:8.67:58,9,0	1/1:4,8:11:7.98:89,8,0	1/1:1,5:5:10.97:110,11,0	1/1:0,2:2:2.49:6,2,0	1/1:2,2:3:6:52,6,0	1/1:6,2:7:5.96:45,6,0	1/1:6,3:6:6.38:46,6,0	0/0:2,1:3:2.13:0,2,5	1/1:8,7:10:11.07:76,11,0	0/1:4,9:11:5.29:96,0,5	./.	1/1:6,0:2:0.89:2,1,0	1/1:10,6:13:4:52,4,0	1/1:5,8:11:13.96:151,14,0	1/1:0,1:1:3:29,3,0
chr10	11869593	.	TA	T	5084.96	PASS	AB=0.795;AC=40;AF=0.714;AN=56;BaseQRankSum=1.107;DP=567;FS=6.691;HRun=14;HaplotypeScore=64.6726;InbreedingCoeff=0.8154;MQ=58.98;MQ0=6;MQRankSum=0.147;QD=11.69;ReadPosRankSum=3.305;VQSLOD=4.7418;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,23:31:38.68:395,39,0	1/1:2,9:12:22.87:150,23,0	0/0:24,0:10:5.71:0,6,115	0/1:12,0:6:13.19:13,0,22	1/1:11,13:24:6.84:183,7,0	0/0:18,0:18:39.03:0,39,358	0/0:15,2:17:12.19:0,12,242	0/0:9,0:24:49.52:0,50,319	1/1:5,9:15:22.80:149,23,0	1/1:9,17:24:47.51:327,48,0	1/1:10,11:20:23.70:164,24,0	1/1:1,12:14:37.74:252,38,0	1/1:5,15:20:38.64:267,39,0	0/1:4,9:13:1.53:127,0,2	1/1:6,16:24:48.62:320,49,0	1/1:7,20:28:24.51:304,25,0	1/1:2,18:21:52.61:355,53,0	1/1:4,14:18:35.68:247,36,0	0/0:12,0:23:58.03:0,58,375	0/0:8,0:19:41.78:0,42,256	0/0:0,0:5:11.52:0,12,67	1/1:4,15:19:26.74:185,27,0	1/1:8,16:24:35.63:247,36,0	1/1:5,24:34:67.63:435,68,0	1/1:2,19:23:45.69:299,46,0	1/1:12,16:28:46.04:311,46,0	1/1:3,11:15:28.81:191,29,0	1/1:1,9:10:23.81:164,24,0
chr10	11870592	.	G	GT	4679.19	PASS	AB=0.628;AC=34;AF=0.607;AN=56;BaseQRankSum=-5.734;DP=560;FS=2.859;HRun=13;HaplotypeScore=64.2341;InbreedingCoeff=0.5581;MQ=70.84;MQ0=1;MQRankSum=1.327;QD=13.56;ReadPosRankSum=1.058;VQSLOD=5.4460;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,21:26:33.30:433,33,0	0/1:4,3:7:29.23:33,0,29	0/0:20,0:14:3.96:0,4,56	0/0:17,1:11:5.43:0,5,40	1/1:6,22:29:62.61:530,63,0	0/0:37,0:40:95.16:0,95,619	0/0:14,0:14:29.72:0,30,206	0/0:35,1:36:41.85:0,42,400	1/1:6,8:14:15.02:139,15,0	1/1:7,20:28:39.88:472,40,0	0/1:6,10:17:5.19:169,0,5	1/1:2,12:15:12.29:244,12,0	1/1:4,5:10:0.79:115,1,0	1/1:2,12:14:21.02:195,21,0	1/1:2,14:16:33.04:306,33,0	1/1:3,11:16:18.14:287,18,0	0/1:11,14:29:15.71:332,0,16	1/1:6,13:21:23.70:196,24,0	0/0:20,1:23:11.87:0,12,207	0/0:21,2:23:28.60:0,29,340	0/0:10,0:10:22.01:0,22,144	1/1:7,9:16:3.90:167,4,0	1/1:6,7:14:20.95:184,21,0	1/1:5,8:13:0.44:147,0,0	0/0:29,1:30:43.46:0,43,440	0/1:7,15:23:7.90:335,0,8	1/1:8,9:20:0.85:157,1,0	1/1:3,13:17:26.87:237,27,0
chr10	11872533	.	G	GAC	14448.87	PASS	AB=0.669;AC=32;AF=0.571;AN=56;BaseQRankSum=-10.210;DP=950;FS=0.337;HRun=0;HaplotypeScore=170.2386;InbreedingCoeff=0.3284;MQ=67.91;MQ0=0;MQRankSum=0.426;QD=20.01;ReadPosRankSum=3.160;VQSLOD=5.2650;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:21,44:66:50.42:1055,50,0	1/1:1,7:8:9.03:132,9,0	0/0:39,0:26:19.74:0,20,137	0/1:37,0:28:4.79:5,0,143	0/1:9,18:28:75.51:426,0,76	0/0:2,0:20:39.77:0,40,196	0/0:15,0:29:45.45:0,45,224	0/0:24,0:25:0.60:0,1,274	1/1:8,24:33:31.39:949,31,0	1/1:23,34:57:0.79:1256,1,0	1/1:8,9:18:19.95:326,20,0	1/1:11,31:42:24.86:1156,25,0	0/1:13,21:35:98.71:831,0,99	1/1:6,24:33:60.20:916,60,0	0/1:24,24:49:99:755,0,128	1/1:19,30:50:0.58:1063,1,0	1/1:13,17:30:16.34:714,16,0	0/1:6,15:22:5.96:691,0,6	0/0:17,0:18:35.42:0,35,371	0/0:17,0:18:21.06:0,21,244	0/0:45,0:48:84.22:0,84,1076	1/1:12,28:41:18.86:760,19,0	0/1:14,18:31:62.91:473,0,63	0/1:16,32:48:3.05:1174,0,3	0/0:26,0:29:77.27:0,77,737	1/1:21,32:55:3.74:1244,4,0	0/1:14,16:29:64.71:429,0,65	1/1:3,4:7:6.02:94,6,0
chr10	11872877	.	GACAGAC	G	1075.33	PASS	AB=1.000;AC=6;AF=0.107;AN=56;BaseQRankSum=9.322;DP=1135;FS=6.463;HRun=0;HaplotypeScore=267.4251;InbreedingCoeff=0.6085;MQ=55.87;MQ0=8;MQRankSum=-7.992;QD=7.47;ReadPosRankSum=-5.070;VQSLOD=1.0347;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,116,3046	0/0:14,0:14:33.08:0,33,1054	0/0:50,0:30:20.08:0,20,449	0/0:51,0:24:49.99:0,50,574	0/0:31,0:31:80.89:0,81,2001	1/1:2,25:28:33.06:587,33,0	1/1:4,30:36:18.16:440,18,0	0/1:54,0:54:99:106,0,949	0/0:54,0:54:99:0,137,3340	0/0:49,0:49:99:0,110,3385	0/0:23,0:23:57.13:0,57,1307	0/0:58,0:58:99:0,166,4421	0/0:49,0:49:99:0,144,2725	0/0:50,0:50:99:0,144,3667	0/0:57,0:57:99:0,156,3914	0/0:44,0:44:92.32:0,92,3288	0/0:30,0:30:84.15:0,84,2191	0/0:26,0:26:72.09:0,72,1822	0/1:26,0:25:78.26:78,0,277	0/0:27,0:27:10.71:0,11,241	0/0:91,0:91:45.82:0,46,374	0/0:41,0:41:99:0,104,2395	0/0:35,0:34:90.10:0,90,1877	0/0:43,0:43:99:0,114,2755	0/0:46,0:46:99:0,104,3214	0/0:32,0:32:86.63:0,87,1912	0/0:23,0:23:68.67:0,69,1817	0/0:18,0:17:16.32:0,16,1453
chr10	11872881	.	GACACACACAC	G	2737.15	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=8.438;DP=1128;FS=1.631;HRun=0;HaplotypeScore=333.8714;InbreedingCoeff=0.7832;MQ=55.38;MQ0=9;MQRankSum=0.749;QD=19.69;ReadPosRankSum=-5.720;VQSLOD=1.1422;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:49:98.92:0,99,4039	0/0:15,0:15:36.09:0,36,1383	0/0:48,0:27:17.06:0,17,108	0/0:48,0:22:21.03:0,21,437	0/0:27,0:32:63.18:0,63,2670	0/1:27,0:27:51.38:51,0,271	0/0:34,0:34:22.92:0,23,195	1/1:16,40:55:89.09:1720,89,0	0/0:43,0:49:99:0,108,4570	0/0:48,0:50:99:0,123,4735	0/0:21,0:21:45.09:0,45,1577	0/0:54,0:60:99:0,150,6286	0/0:44,0:51:99:0,99,3526	0/0:47,0:50:99:0,122,4978	0/0:51,0:57:99:0,117,5083	0/0:45,0:45:99:0,111,4445	0/0:27,0:28:68.81:0,69,2877	0/0:21,0:26:66.14:0,66,2498	1/1:11,16:26:37.50:811,38,0	1/1:5,23:29:16.94:302,17,0	0/0:28,58:87:2.96:0,3,19	0/0:33,0:40:78.23:0,78,3198	0/0:34,0:35:66.15:0,66,2629	0/0:39,0:43:96.26:0,96,3627	0/0:43,0:44:87.39:0,87,4285	0/0:34,0:34:75.25:0,75,2956	0/0:21,0:23:66.19:0,66,2720	0/0:16,0:17:48.16:0,48,2215
chr10	11873272	.	CT	C	3182.86	PASS	AB=0.693;AC=43;AF=0.768;AN=56;BaseQRankSum=-0.557;DP=582;FS=2.733;HRun=16;HaplotypeScore=80.9220;InbreedingCoeff=0.3750;MQ=69.73;MQ0=8;MQRankSum=-0.205;QD=6.66;ReadPosRankSum=3.442;VQSLOD=3.1323;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:7,19:29:3.91:125,0,4	1/1:5,7:12:21.81:128,22,0	0/0:27,0:11:3.64:0,4,26	0/0:37,0:21:8.78:0,9,75	1/1:13,13:27:49.21:284,49,0	0/1:18,7:25:59.82:60,0,192	0/0:13,1:14:2.96:0,3,130	1/1:16,13:31:18.91:210,19,0	1/1:9,4:14:29.33:153,29,0	1/1:10,8:20:27.27:153,27,0	0/1:9,8:17:1.30:72,0,1	1/1:15,4:19:9.06:45,9,0	1/1:6,5:12:18.10:109,18,0	1/1:5,9:15:28.32:167,28,0	0/1:14,3:19:9.69:46,0,10	1/1:9,7:16:17.43:104,17,0	1/1:9,16:28:47.75:253,48,0	1/1:4,12:15:34.36:203,34,0	1/1:18,6:25:28.23:154,28,0	1/1:7,9:16:14.53:90,15,0	1/1:7,5:15:3.38:100,3,0	1/1:18,9:28:6.03:142,6,0	1/1:9,3:13:19.09:110,19,0	1/1:13,4:19:28.03:142,28,0	0/0:24,0:26:10.40:0,10,244	1/1:15,10:25:5.39:209,5,0	0/1:5,7:12:26.76:84,0,27	1/1:6,12:19:15.13:196,15,0
chr10	11873612	.	TGA	T	1241.82	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=3.207;DP=533;FS=7.201;HRun=0;HaplotypeScore=90.2506;InbreedingCoeff=0.6582;MQ=63.33;MQ0=12;MQRankSum=2.855;QD=8.62;ReadPosRankSum=-3.644;VQSLOD=1.7245;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:37.24:0,37,285	0/0:7,0:7:17.80:0,18,131	0/1:26,0:19:19.81:20,0,273	0/1:24,0:13:2.23:2,0,115	0/0:21,0:21:32.95:0,33,271	0/0:31,0:30:50.94:0,51,375	0/0:23,0:23:35.54:0,36,271	1/1:6,21:26:59.85:496,60,0	0/0:15,0:15:25.12:0,25,187	0/0:15,0:15:24.63:0,25,277	0/0:14,0:14:4.78:0,5,172	0/0:14,0:14:17.86:0,18,210	0/0:12,0:11:25.40:0,25,174	0/0:13,0:13:31.82:0,32,235	0/0:17,0:17:35.97:0,36,303	0/0:33,0:32:57.42:0,57,421	0/0:34,0:34:16.38:0,16,331	0/1:13,0:13:26.98:27,0,94	1/1:15,0:13:29.97:260,30,0	1/1:18,0:18:16.86:291,17,0	1/1:21,0:20:21.51:313,22,0	0/0:15,0:15:20.88:0,21,157	0/0:13,0:12:13.53:0,14,101	0/0:22,0:22:32.68:0,33,271	0/0:14,0:14:29.40:0,29,308	0/0:18,0:18:33.29:0,33,387	0/0:24,0:24:56.42:0,56,421	0/0:11,0:10:28.67:0,29,211
chr10	11873614	.	AGTGTGT	A	1856.96	PASS	AB=0.882;AC=34;AF=0.739;AN=46;BaseQRankSum=1.523;DP=539;FS=0.000;HRun=0;HaplotypeScore=122.4112;InbreedingCoeff=0.1022;MQ=62.01;MQ0=12;MQRankSum=-2.717;QD=4.86;ReadPosRankSum=2.539;VQSLOD=2.2588;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:19,4:23:3.01:61,3,0	1/1:9,0:9:5.05:53,5,0	./.	./.	0/1:16,5:21:10.24:10,0,13	1/1:20,0:30:12.04:167,12,0	1/1:12,0:22:9.03:126,9,0	0/0:27,0:26:0:0,0,0	1/1:11,5:16:6.02:102,6,0	0/1:11,3:15:40.81:161,0,41	1/1:12,2:15:6.02:102,6,0	1/1:11,3:14:3.01:51,3,0	1/1:10,3:12:6.02:121,6,0	1/1:11,2:13:6.02:121,6,0	./.	1/1:20,11:31:18.76:346,19,0	1/1:24,12:36:7.76:115,8,0	0/1:10,1:14:15.57:96,0,16	./.	0/1:18,0:18:6.52:75,0,7	0/0:22,0:21:3.01:0,3,54	./.	1/1:12,2:13:3:60,3,0	1/1:18,5:23:0.45:1,0,0	0/0:13,0:14:18.05:0,18,347	0/1:18,0:18:3.12:3,0,20	1/1:18,6:24:8.41:181,8,0	0/1:10,0:10:17.26:36,0,17
chr10	11874114	.	C	CT	284.11	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-3.512;DP=425;FS=1.016;HRun=10;HaplotypeScore=47.3362;InbreedingCoeff=0.6690;MQ=74.13;MQ0=4;MQRankSum=-0.052;QD=8.61;ReadPosRankSum=-0.472;VQSLOD=1.3024;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:31:61.93:0,62,498	0/0:3,0:3:8.99:0,9,74	0/0:24,0:17:3.59:0,4,112	0/0:7,0:4:1.69:0,2,22	0/0:14,0:14:38.94:0,39,320	1/1:6,15:21:8.44:295,8,0	1/1:5,7:12:4.90:90,5,0	0/0:20,1:22:9.11:0,9,266	0/0:13,0:13:20.95:0,21,169	0/0:16,0:16:32.95:0,33,271	0/0:16,0:16:38.91:0,39,317	0/0:13,0:13:26.94:0,27,219	0/0:11,0:11:14.96:0,15,123	0/0:11,0:11:23.97:0,24,197	0/0:21,0:21:44.94:0,45,369	0/0:12,0:14:38:0,38,301	0/0:13,0:13:32.94:0,33,267	0/0:12,0:12:29.96:0,30,246	0/0:21,0:21:38.93:0,39,320	0/0:18,0:18:38.93:0,39,320	0/0:12,0:11:20.96:0,21,172	0/0:5,0:5:11.98:0,12,99	0/0:12,0:13:28.99:0,29,227	0/0:18,0:19:37.98:0,38,301	0/0:19,0:19:38.92:0,39,320	0/0:16,0:16:35.93:0,36,296	0/0:18,0:19:37.81:0,38,301	0/0:9,0:9:20.95:0,21,172
chr10	11879698	.	TAC	T	1736.54	PASS	AB=0.850;AC=41;AF=0.820;AN=50;BaseQRankSum=4.958;DP=559;FS=6.280;HRun=0;HaplotypeScore=92.2291;InbreedingCoeff=0.1455;MQ=69.14;MQ0=10;MQRankSum=1.503;QD=3.79;ReadPosRankSum=2.287;VQSLOD=1.4733;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:23,11:34:6.01:64,6,0	1/1:8,3:11:2.81:32,3,0	./.	0/1:24,0:18:0:0,0,0	0/1:18,1:18:26.23:104,0,26	1/1:10,0:14:2.84:14,3,0	./.	./.	1/1:7,5:13:8.44:78,8,0	1/1:10,10:20:26.57:186,27,0	1/1:12,1:12:5.99:48,6,0	0/1:9,2:19:32.42:51,0,32	1/1:9,5:15:20.57:194,21,0	1/1:9,6:15:9.02:96,9,0	1/1:21,11:32:6.01:64,6,0	1/1:14,9:23:5.84:47,6,0	1/1:23,3:26:26.82:239,27,0	1/1:8,10:18:6.02:64,6,0	1/1:16,0:18:11.67:76,12,0	1/1:10,0:20:4.88:20,5,0	1/1:29,0:30:17.79:123,18,0	1/1:14,7:21:2.96:32,3,0	0/0:9,0:9:5.91:0,6,40	0/1:29,0:29:12.94:13,0,244	0/0:19,0:19:4.27:0,4,186	1/1:13,5:18:14.99:141,15,0	0/1:8,10:18:32.68:83,0,33	1/1:0,7:7:9.02:96,9,0
chr10	11884119	.	TGGTAGAAAAATA	T	21149.87	PASS	AC=36;AF=0.667;AN=54;BaseQRankSum=12.704;DP=560;FS=61.769;HRun=0;HaplotypeScore=206.1094;InbreedingCoeff=0.9508;MQ=68.77;MQ0=1;MQRankSum=-11.788;QD=58.91;ReadPosRankSum=5.628;VQSLOD=1.9271;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,13:18:12.04:443,12,0	1/1:4,8:12:20.50:775,21,0	0/0:14,0:15:15.17:0,15,987	0/0:11,0:11:5.44:0,5,1248	1/1:4,17:21:30.10:1108,30,0	0/0:19,0:19:51.18:0,51,2820	0/0:19,0:19:54.13:0,54,2725	0/0:40,0:40:99:0,102,5540	1/1:5,11:16:18.06:665,18,0	1/1:6,16:19:36.09:1158,36,0	1/1:4,18:22:39.13:1441,39,0	1/1:2,20:21:51.18:1883,51,0	1/1:5,21:25:48.16:1773,48,0	1/1:7,15:21:36.12:1329,36,0	1/1:1,16:17:42.14:1552,42,0	1/1:8,21:27:45.15:1663,45,0	1/1:9,10:19:9.03:333,9,0	1/1:2,6:8:9.03:333,9,0	0/0:19,0:19:51.18:0,51,2881	0/0:30,0:30:84.02:0,84,4378	0/0:22,0:23:60.68:0,61,3175	1/1:1,21:22:45.15:1663,45,0	1/1:2,15:17:39.13:1440,39,0	1/1:7,17:23:15.05:553,15,0	0/0:23,0:23:60.18:0,60,3112	1/1:3,23:24:60.21:2042,60,0	1/1:3,11:14:27.09:998,27,0	./.
chr10	11884161	.	T	TACAC	4375.38	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=-8.503;DP=647;FS=31.105;HRun=0;HaplotypeScore=203.4379;InbreedingCoeff=0.8292;MQ=58.11;MQ0=4;MQRankSum=-1.009;QD=30.81;ReadPosRankSum=1.976;VQSLOD=3.3437;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:23:39.13:0,39,680	0/0:11,0:11:24.08:0,24,420	0/0:24,0:17:39.08:0,39,649	0/0:24,0:14:39.13:0,39,677	0/0:21,0:20:24.05:0,24,361	0/0:33,0:32:84.29:0,84,1462	0/0:24,0:24:66.19:0,66,1107	1/1:18,11:27:39.11:940,39,0	0/0:18,0:18:33.11:0,33,578	0/0:28,0:27:75.25:0,75,1289	0/0:21,0:21:30.10:0,30,525	0/0:29,0:29:63.21:0,63,1090	0/0:23,0:23:66.22:0,66,1132	0/0:21,0:20:45.63:0,46,788	0/0:18,0:18:36.12:0,36,629	0/0:27,0:24:60.20:0,60,1026	0/0:16,0:16:30.08:0,30,482	0/1:15,0:14:15.07:15,0,542	1/1:11,8:19:26.88:625,27,0	1/1:6,17:24:30.10:749,30,0	1/1:28,24:51:87.63:2047,88,0	0/0:22,0:22:27.09:0,27,470	0/0:15,0:14:21.07:0,21,368	0/0:31,0:30:51.17:0,51,894	0/0:22,0:22:54.19:0,54,947	0/0:30,0:28:69.24:0,69,1206	0/0:19,0:19:54.18:0,54,945	0/0:2,0:2:3.01:0,3,53
chr10	11884308	.	G	GCA	5208.66	PASS	AB=0.612;AC=7;AF=0.125;AN=56;BaseQRankSum=-14.703;DP=1047;FS=9.705;HRun=0;HaplotypeScore=140.7982;InbreedingCoeff=0.8314;MQ=54.45;MQ0=10;MQRankSum=-1.522;QD=21.35;ReadPosRankSum=2.177;VQSLOD=5.1547;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:47:99:0,108,1326	0/0:10,0:10:20.80:0,21,239	0/0:61,0:19:31.85:0,32,315	0/0:57,0:14:27.02:0,27,311	0/0:13,0:13:21.03:0,21,235	0/0:16,0:15:30.10:0,30,378	0/0:35,0:35:69.22:0,69,871	1/1:16,23:34:48.07:962,48,0	0/0:42,0:41:72.23:0,72,908	0/0:44,0:42:84.09:0,84,1026	0/0:15,0:15:29.99:0,30,357	0/0:48,0:46:93.27:0,93,1159	0/0:50,0:50:96.11:0,96,1172	0/0:42,0:42:62.54:0,63,750	0/0:28,0:28:54.17:0,54,681	0/0:34,0:33:66.08:0,66,817	0/0:32,0:31:72.20:0,72,892	0/0:20,0:20:48.15:0,48,602	1/1:10,13:16:27.09:427,27,0	1/1:16,9:23:27:431,27,0	0/1:57,94:139:99:3389,0,145	0/0:22,0:22:48.15:0,48,606	0/0:18,0:17:21.05:0,21,252	0/0:66,0:68:99:0,171,2102	0/0:17,0:17:30.09:0,30,379	0/0:38,0:37:84.27:0,84,1060	0/0:30,0:30:69.20:0,69,854	0/0:14,0:14:25.73:0,26,338
chr10	11884381	.	AC	A	1640.71	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.555;DP=1157;FS=12.424;HRun=1;HaplotypeScore=130.3524;InbreedingCoeff=0.9337;MQ=51.54;MQ0=77;MQRankSum=3.722;QD=25.64;ReadPosRankSum=1.109;VQSLOD=2.3113;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:55:99:0,147,2307	0/0:15,0:14:39.09:0,39,589	0/0:22,0:5:15.05:0,15,228	0/0:34,0:2:6.02:0,6,96	0/0:25,0:22:57.18:0,57,887	1/1:0,24:24:66.22:923,66,0	1/1:4,36:31:60.20:839,60,0	0/0:45,0:27:72.23:0,72,1124	0/0:51,0:49:99:0,144,2246	0/0:45,0:39:99:0,114,1796	0/0:19,0:16:41.67:0,42,646	0/0:73,0:71:99:0,193,3036	0/0:64,0:64:99:0,187,2922	0/0:56,0:55:99:0,157,2464	0/0:57,0:54:99:0,157,2493	0/0:46,0:44:99:0,117,1866	0/0:33,0:33:99:0,99,1506	0/0:26,0:26:74.84:0,75,1149	0/0:23,0:15:45.15:0,45,708	0/0:30,0:26:68.67:0,69,1099	0/0:157,0:145:99:0,340,5319	0/0:34,0:31:65.47:0,65,1054	0/0:18,0:16:41.44:0,41,669	0/0:62,0:61:99:0,175,2728	0/0:20,0:18:45.15:0,45,719	0/0:50,0:39:99:0,117,1842	0/0:26,0:26:66.19:0,66,1006	0/0:5,0:5:15.05:0,15,239
chr10	11884495	.	GCA	G	378.55	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.170;DP=1280;FS=9.847;HRun=0;HaplotypeScore=174.7569;InbreedingCoeff=0.9537;MQ=55.18;MQ0=16;MQRankSum=2.249;QD=23.66;ReadPosRankSum=0.664;VQSLOD=4.1030;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:57:99:0,144,2460	0/0:16,0:16:30.08:0,30,473	0/0:50,0:9:20.58:0,21,357	0/0:69,0:14:10.42:0,10,346	0/0:23,0:23:60.21:0,60,1023	0/0:32,0:31:86.88:0,87,1487	0/0:34,0:34:74.34:0,74,1424	0/0:36,0:36:90.26:0,90,1472	0/0:57,0:57:99:0,156,2636	0/0:64,0:64:99:0,178,2975	0/0:29,0:29:57.20:0,57,974	0/0:66,0:66:99:0,174,2947	0/0:56,0:56:99:0,151,2553	0/0:47,1:48:89.77:0,90,2107	0/0:52,0:52:99:0,141,2395	0/0:54,0:54:99:0,144,2446	0/0:44,0:44:99:0,117,1995	0/0:41,0:41:99:0,117,1866	0/0:24,0:24:60.20:0,60,1003	0/0:23,0:23:51.17:0,51,875	0/0:177,0:177:99:0,352,5903	0/0:29,0:29:63.22:0,63,1080	0/0:21,0:21:51.13:0,51,838	0/0:61,0:61:99:0,154,2607	1/1:3,13:16:36.12:473,36,0	0/0:54,0:53:99:0,144,2448	0/0:32,0:32:96.33:0,96,1636	0/0:14,0:14:42.13:0,42,692
chr10	11884569	.	ACACACCCATG	A	2852.10	PASS	AB=0.500;AC=7;AF=0.125;AN=56;BaseQRankSum=7.340;DP=1044;FS=2.093;HRun=0;HaplotypeScore=304.6843;InbreedingCoeff=0.9428;MQ=56.60;MQ0=6;MQRankSum=1.274;QD=18.05;ReadPosRankSum=-5.248;VQSLOD=1.5791;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,155,6595	0/0:17,0:17:47.95:0,48,1931	0/0:51,0:22:43.54:0,44,1343	0/0:63,0:43:87.58:0,88,2593	0/0:16,0:16:47.18:0,47,1963	0/0:32,0:32:51.98:0,52,3189	0/0:29,0:29:84.23:0,84,3502	1/1:8,29:37:87.01:1328,87,0	0/0:39,0:39:99:0,102,3806	0/0:48,0:48:99:0,138,5831	0/0:23,0:23:45.11:0,45,1628	0/0:58,0:58:99:0,154,6675	0/0:37,0:37:99:0,99,3804	0/0:63,0:63:99:0,158,7091	0/0:49,0:48:99:0,144,6395	0/0:34,0:34:87.20:0,87,3947	0/0:37,0:37:99:0,104,4501	0/0:36,0:36:81.12:0,81,3865	1/1:2,14:16:39.05:836,39,0	0/1:0,17:17:0:0,0,0	1/1:66,22:88:19.75:830,20,0	0/0:27,0:27:81.24:0,81,3707	0/0:20,0:19:53.84:0,54,2354	0/0:56,0:56:99:0,150,5620	0/0:21,0:21:57.19:0,57,2706	0/0:41,0:39:99:0,111,4980	0/0:21,0:21:54.17:0,54,2117	0/0:14,0:14:42.14:0,42,2060
chr10	11884579	.	G	GCA	905.61	PASS	AB=1.000;AC=5;AF=0.093;AN=54;BaseQRankSum=7.982;DP=1059;FS=2.366;HRun=0;HaplotypeScore=165.5345;InbreedingCoeff=0.7779;MQ=55.61;MQ0=10;MQRankSum=-3.476;QD=6.91;ReadPosRankSum=-5.972;VQSLOD=2.1711;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:56:99:0,142,1924	0/0:20,0:20:51.14:0,51,654	0/0:60,0:25:58.02:0,58,666	0/0:73,0:40:86.03:0,86,1051	0/0:15,0:15:39.13:0,39,513	0/0:27,0:28:59.75:0,60,841	0/0:34,0:34:94.12:0,94,1194	1/1:37,0:37:18.69:524,19,0	0/0:35,0:35:84.27:0,84,1104	0/0:50,0:50:99:0,138,1814	0/0:19,0:19:39.13:0,39,513	0/0:56,0:56:99:0,144,1878	0/0:33,0:33:83.48:0,83,1070	0/0:57,0:57:99:0,162,2085	0/0:55,0:54:99:0,147,1887	0/0:32,0:32:90.75:0,91,1169	0/0:38,0:38:99:0,105,1364	0/0:41,0:41:78.59:0,79,1096	0/1:17,0:16:18.20:198,0,18	./.	1/1:68,9:77:20.97:310,21,0	0/0:27,0:27:75.24:0,75,986	0/0:21,0:20:57.19:0,57,749	0/0:55,0:55:99:0,120,1561	0/0:21,0:21:54.18:0,54,709	0/0:43,0:42:99:0,120,1566	0/0:23,0:23:63.15:0,63,781	0/0:16,0:16:48.16:0,48,631
chr10	11885460	.	TAACAACAACAAC	T	14498.05	PASS	AB=1.000;AC=39;AF=0.722;AN=54;BaseQRankSum=-0.428;DP=563;FS=0.624;HRun=0;HaplotypeScore=180.5503;InbreedingCoeff=0.8516;MQ=61.09;MQ0=9;MQRankSum=-5.394;QD=35.89;ReadPosRankSum=1.500;VQSLOD=4.5838;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,16:27:24.04:676,24,0	1/1:0,6:6:15.05:518,15,0	0/1:24,0:15:9.06:9,0,60	./.	1/1:8,8:15:20.96:508,21,0	0/0:18,0:18:21.07:0,21,1042	0/0:21,0:21:6.08:0,6,299	0/0:25,0:22:15.02:0,15,229	1/1:6,20:26:9.64:886,10,0	1/1:11,8:18:24.04:688,24,0	1/1:0,8:8:18.02:538,18,0	1/1:5,13:18:24.05:746,24,0	1/1:10,13:23:21.07:725,21,0	1/1:12,9:21:24.08:829,24,0	1/1:12,21:33:45.15:1554,45,0	1/1:10,17:27:30.10:1036,30,0	1/1:13,10:23:27.05:792,27,0	1/1:10,12:21:18.06:622,18,0	0/0:10,0:12:12.04:0,12,171	0/0:7,0:19:12.39:0,12,511	0/0:17,0:31:24.05:0,24,402	1/1:7,6:13:9.03:311,9,0	1/1:7,9:16:18.02:537,18,0	1/1:10,16:26:24.08:828,24,0	0/0:12,0:11:18.03:0,18,743	1/1:7,14:21:32.98:854,33,0	1/1:9,15:24:39.13:1322,39,0	1/1:5,6:11:15.05:518,15,0
chr10	11885484	.	C	CAAG	508.46	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-4.419;DP=547;FS=1.349;HRun=0;HaplotypeScore=147.9292;InbreedingCoeff=0.9275;MQ=51.33;MQ0=12;MQRankSum=1.942;QD=13.74;ReadPosRankSum=2.864;VQSLOD=3.6557;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:49.67:0,50,350	0/0:6,0:6:14.97:0,15,122	0/0:23,0:15:40.57:0,41,396	0/0:22,0:15:35.70:0,36,330	0/0:14,0:13:35.54:0,36,262	1/1:1,16:16:21.07:481,21,0	1/1:1,19:20:5.85:138,6,0	0/0:25,0:22:59.96:0,60,521	0/0:25,0:25:38.30:0,38,289	0/0:19,0:17:47.83:0,48,390	0/0:9,0:9:23.78:0,24,177	0/0:19,0:19:35.58:0,36,274	0/0:17,0:17:32.79:0,33,253	0/0:16,0:16:38.77:0,39,298	0/0:29,0:29:62.79:0,63,502	0/0:25,0:25:50.90:0,51,415	0/0:27,0:27:68.45:0,68,525	0/0:22,0:21:38.17:0,38,267	0/0:12,0:10:29.79:0,30,239	0/0:23,0:23:62.37:0,62,465	0/0:22,0:22:38.55:0,39,278	0/0:10,0:10:23.87:0,24,182	0/0:18,0:18:35.68:0,36,268	0/0:28,0:28:50.64:0,51,381	0/0:13,0:13:35.84:0,36,367	0/0:22,0:22:59.69:0,60,469	0/0:24,0:24:62.58:0,63,473	0/0:11,0:10:26.88:0,27,210
chr10	11892176	.	T	TA	695.94	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=-4.171;DP=594;FS=0.000;HRun=10;HaplotypeScore=66.6151;InbreedingCoeff=0.6888;MQ=72.86;MQ0=1;MQRankSum=-0.189;QD=11.80;ReadPosRankSum=0.211;VQSLOD=3.0586;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:33:73.90:0,74,593	0/0:10,0:10:23.97:0,24,197	0/1:21,0:18:7.29:7,0,89	0/0:22,0:14:4.63:0,5,52	0/0:21,0:22:55.96:0,56,449	1/1:2,18:20:48.12:512,48,0	1/1:4,13:17:8.44:295,8,0	0/0:24,0:25:52.95:0,53,423	0/0:14,0:14:23.64:0,24,193	0/0:27,0:27:59.85:0,60,486	0/0:24,1:26:35.96:0,36,491	0/0:17,0:17:25.44:0,25,299	0/0:21,0:21:56.89:0,57,460	0/0:14,0:15:41.18:0,41,327	0/0:24,0:24:65.91:0,66,539	0/0:18,0:18:44.93:0,45,369	0/0:29,0:29:77.88:0,78,635	0/0:27,0:27:62.10:0,62,499	0/0:22,0:22:44.90:0,45,369	0/0:27,0:27:71.89:0,72,589	0/0:3,0:3:8.99:0,9,74	0/0:14,0:14:8.77:0,9,222	0/0:24,0:25:56.89:0,57,463	0/0:17,0:17:30.21:0,30,309	0/0:20,0:20:50.92:0,51,419	0/0:30,0:30:71.83:0,72,584	0/0:36,0:37:76.12:0,76,791	0/0:7,0:7:20.98:0,21,172
chr10	11896658	.	A	AG	817.09	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-3.440;DP=673;FS=0.000;HRun=9;HaplotypeScore=71.3129;InbreedingCoeff=0.9321;MQ=67.14;MQ0=3;MQRankSum=-0.012;QD=16.68;ReadPosRankSum=-2.412;VQSLOD=3.2533;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:80.97:0,81,702	0/0:19,0:19:50.95:0,51,437	0/0:30,0:17:32.52:0,33,283	0/0:32,0:25:4.86:0,5,249	0/0:21,0:21:40.98:0,41,381	1/1:4,16:21:18.82:403,19,0	1/1:6,22:28:28.09:533,28,0	0/0:33,0:32:49.96:0,50,420	0/0:18,0:18:35.97:0,36,312	0/0:20,0:20:39.46:0,39,339	0/0:12,0:12:29.98:0,30,260	0/0:31,0:31:71.95:0,72,625	0/0:28,0:28:80.91:0,81,699	0/0:23,0:23:50.98:0,51,443	0/0:32,0:33:83:0,83,709	0/0:26,0:26:56.96:0,57,495	0/0:20,0:20:41.98:0,42,365	0/0:19,0:19:50.98:0,51,443	0/0:18,0:18:32.94:0,33,277	0/0:15,0:15:29.95:0,30,256	0/0:15,0:15:29.96:0,30,254	0/0:27,0:27:56.93:0,57,485	0/0:18,0:18:38.07:0,38,337	0/0:20,0:20:53.97:0,54,465	0/0:26,0:26:62.97:0,63,547	0/0:34,0:34:51.91:0,52,618	0/0:36,0:36:92.90:0,93,790	0/0:13,0:13:32.99:0,33,286
chr10	11898014	.	GT	G	21564	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=11.338;DP=713;FS=6.171;HRun=2;HaplotypeScore=120.5585;InbreedingCoeff=0.9974;MQ=87.84;MQ0=0;MQRankSum=-8.749;QD=35.94;ReadPosRankSum=4.019;VQSLOD=4.3032;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,111,1610	1/1:0,6:6:18.06:234,18,0	0/0:29,0:29:84.28:0,84,1204	0/0:27,0:27:68.36:0,68,983	1/1:0,21:21:60.19:777,60,0	1/1:0,23:23:69.22:893,69,0	1/1:0,33:33:93.30:1206,93,0	1/1:0,36:36:99:1387,108,0	1/1:0,27:27:72.19:915,72,0	1/1:1,28:29:84.27:1082,84,0	1/1:0,9:9:27.09:349,27,0	1/1:0,32:32:93.30:1207,93,0	1/1:0,19:19:48.16:622,48,0	1/1:0,27:26:66.21:855,66,0	1/1:3,35:38:99:1276,102,0	1/1:1,23:24:66.18:839,66,0	1/1:0,25:25:69.22:894,69,0	1/1:0,19:19:57.19:739,57,0	1/1:0,21:21:60.14:732,60,0	1/1:0,25:25:72.23:935,72,0	1/1:0,58:58:99:2140,166,0	1/1:0,12:12:33.11:428,33,0	1/1:0,14:14:42.14:545,42,0	1/1:1,41:42:99:1363,105,0	0/0:18,0:18:54.18:0,54,809	1/1:0,25:25:72.21:903,72,0	1/1:0,19:19:51.17:661,51,0	1/1:0,16:16:45.15:584,45,0
chr10	11898203	.	A	ACTCTCTCTCTCTCT	4865.03	PASS	AB=1.000;AC=39;AF=0.722;AN=54;BaseQRankSum=-1.594;DP=698;FS=9.611;HRun=0;HaplotypeScore=213.1038;InbreedingCoeff=0.6401;MQ=41.49;MQ0=64;MQRankSum=-5.493;QD=10.18;ReadPosRankSum=-1.116;VQSLOD=2.7862;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:36:46.17:0,46,1426	1/1:11,0:7:2.80:7,3,0	0/0:8,0:1:3.01:0,3,94	0/1:14,0:4:19.92:20,0,25	1/1:19,0:17:1.72:4,2,0	1/1:24,0:22:21.37:332,21,0	1/1:33,0:29:8.21:149,8,0	0/0:27,0:12:15.05:0,15,509	1/1:20,0:18:13.29:433,13,0	1/1:32,0:26:12.98:337,13,0	1/1:22,0:17:2.60:75,3,0	1/1:32,0:30:9.51:263,10,0	1/1:25,0:22:21.53:704,22,0	1/1:29,0:25:23.71:724,24,0	1/1:43,0:35:15.04:319,15,0	1/1:11,4:16:2.54:110,3,0	1/1:18,6:25:5:175,5,0	1/1:8,0:11:6.02:216,6,0	0/0:16,0:13:20.41:0,20,678	0/0:14,0:13:15.04:0,15,470	0/0:52,0:38:41.57:0,42,1384	1/1:19,0:17:3:25,3,0	./.	1/1:28,0:25:6.05:95,6,0	0/0:35,0:35:39.12:0,39,1406	1/1:38,0:28:21.26:462,21,0	1/1:17,0:15:8.92:261,9,0	1/1:15,0:9:7.83:155,8,0
chr10	11900138	.	CACAG	C	6193.92	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=14.072;DP=798;FS=0.785;HRun=0;HaplotypeScore=127.1127;InbreedingCoeff=0.9993;MQ=76.59;MQ0=0;MQRankSum=-8.773;QD=53.40;ReadPosRankSum=-2.066;VQSLOD=5.5372;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,144,3923	0/0:10,0:10:30.10:0,30,836	0/0:29,0:27:81.26:0,81,2166	0/0:22,0:22:66.09:0,66,1599	0/0:29,0:29:84.29:0,84,2272	0/0:25,0:25:75.26:0,75,2074	0/0:27,0:27:81.28:0,81,2241	1/1:1,41:42:99:2352,120,0	0/0:20,0:20:60.21:0,60,1668	0/0:40,0:40:99:0,117,3205	0/0:21,0:21:63.22:0,63,1710	0/0:39,0:39:99:0,117,3269	0/0:30,0:30:90.28:0,90,2412	0/0:27,0:27:81.28:0,81,2258	0/0:42,0:42:99:0,126,3463	0/0:36,0:36:99:0,105,2820	0/0:37,0:37:99:0,111,3029	0/0:32,0:32:96.33:0,96,2655	1/1:1,18:19:51.17:1009,51,0	1/1:1,20:21:57.20:1136,57,0	1/1:3,31:34:87.26:1697,87,0	0/0:33,0:33:93.31:0,93,2518	0/0:18,0:18:51.18:0,51,1410	0/0:36,0:36:99:0,105,2916	0/0:18,0:18:54.19:0,54,1511	0/0:26,0:26:78.27:0,78,2160	0/0:29,0:29:87.28:0,87,2321	0/0:8,0:8:24.08:0,24,671
chr10	11900977	.	CTCTATCACCACGCCATGCTCCCAG	C	381.25	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-4.133;DP=857;FS=1.996;HRun=0;HaplotypeScore=552.0027;InbreedingCoeff=0.8856;MQ=76.33;MQ0=0;MQRankSum=0.051;QD=6.93;ReadPosRankSum=-1.790;VQSLOD=-0.5458;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:90.07:0,90,5594	0/0:6,0:6:6.02:0,6,638	0/0:32,0:32:44.96:0,45,453	0/0:23,0:22:25.39:0,25,319	0/0:21,0:21:48.10:0,48,2724	1/1:9,16:25:6.02:177,6,0	1/1:30,0:30:38.88:316,39,0	0/0:32,0:32:60.06:0,60,659	0/0:38,0:38:78.10:0,78,3860	0/0:26,0:26:51.13:0,51,2463	0/0:13,0:13:30.05:0,30,1170	0/0:50,0:50:99:0,108,4922	0/0:39,0:39:93.20:0,93,5095	0/0:45,0:45:99:0,105,5581	0/0:48,0:48:99:0,105,5896	0/0:39,0:39:81.09:0,81,4360	0/0:32,0:32:72.12:0,72,4707	0/0:21,0:21:45.09:0,45,3572	0/0:36,0:36:57.12:0,57,2180	0/0:15,0:15:21.05:0,21,1587	0/0:71,0:71:99:0,165,7070	0/0:33,0:33:75.15:0,75,4711	0/0:27,0:27:63.07:0,63,3042	0/0:32,0:32:81.16:0,81,5367	0/0:26,0:26:57.12:0,57,3806	0/0:23,0:23:54.08:0,54,1563	0/0:24,0:23:45.06:0,45,2233	0/0:10,0:10:18.03:0,18,1365
chr10	11901785	.	CAG	C	21096.82	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=17.527;DP=826;FS=11.398;HRun=0;HaplotypeScore=104.8430;InbreedingCoeff=1.0000;MQ=89.06;MQ0=0;MQRankSum=-4.544;QD=40.26;ReadPosRankSum=4.807;VQSLOD=6.2151;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,111,2112	1/1:0,15:15:45.15:679,45,0	0/0:31,0:31:87.30:0,87,1623	0/0:28,0:28:84.21:0,84,1487	1/1:0,38:38:99:1644,108,0	0/0:24,0:24:72.25:0,72,1381	0/0:23,0:23:66.21:0,66,1210	0/0:25,0:25:75.24:0,75,1352	1/1:2,23:25:60.20:918,60,0	1/1:1,36:37:99:1583,105,0	1/1:0,14:14:36.12:551,36,0	1/1:1,35:36:90.31:1378,90,0	1/1:2,23:25:63.13:964,63,0	1/1:0,30:30:81.28:1240,81,0	1/1:1,39:40:99:1654,108,0	1/1:0,41:41:99:1653,108,0	1/1:2,26:28:72.24:1102,72,0	1/1:1,28:29:60.20:914,60,0	0/0:39,0:39:99:0,110,2107	0/0:27,0:27:81.26:0,81,1522	0/0:38,0:38:99:0,114,2167	1/1:0,29:29:84.24:1259,84,0	1/1:1,24:25:57.12:872,57,0	1/1:0,26:26:69.23:1056,69,0	0/0:29,0:29:87.30:0,87,1681	1/1:1,34:35:99:1471,99,0	1/1:0,36:36:96.33:1469,96,0	1/1:0,15:15:45.15:689,45,0
chr10	11902998	.	T	TG	5421.61	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-4.203;DP=485;FS=10.875;HRun=9;HaplotypeScore=82.7756;InbreedingCoeff=0.9042;MQ=78.29;MQ0=1;MQRankSum=-1.196;QD=19.02;ReadPosRankSum=2.538;VQSLOD=4.8457;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:47.93:0,48,413	1/1:3,7:10:18.05:199,18,0	0/0:18,0:17:8.23:0,8,205	0/0:16,0:17:26.28:0,26,204	1/1:4,7:11:15.04:166,15,0	0/0:19,0:19:47.99:0,48,416	0/0:18,0:18:35.98:0,36,313	0/0:33,0:33:59.94:0,60,521	1/1:2,15:17:36.10:398,36,0	1/1:3,10:14:21.06:232,21,0	1/1:6,3:9:9.02:100,9,0	1/1:0,15:15:33.09:365,33,0	1/1:3,10:13:1.02:239,1,0	1/1:6,13:19:10.04:339,10,0	1/1:4,16:20:42.11:465,42,0	1/1:4,17:21:19.07:439,19,0	1/1:6,7:13:21.06:232,21,0	1/1:5,6:11:15.04:166,15,0	0/0:13,0:13:29.99:0,30,260	0/0:19,0:19:35.98:0,36,312	0/0:14,0:14:23.98:0,24,208	1/1:8,13:21:7.08:306,7,0	1/1:5,14:19:29.91:331,30,0	1/1:3,12:16:6.73:279,7,0	0/0:22,0:22:41.95:0,42,360	1/1:6,16:22:45.07:470,45,0	1/1:5,23:27:48.07:531,48,0	1/1:0,6:6:15.04:166,15,0
chr10	11905873	.	G	GCGCTCTCTCT	2377.96	PASS	AB=1.000;AC=30;AF=0.536;AN=56;BaseQRankSum=-1.606;DP=462;FS=34.042;HRun=0;HaplotypeScore=129.2709;InbreedingCoeff=0.3518;MQ=63.17;MQ0=25;MQRankSum=-2.975;QD=8.58;ReadPosRankSum=-1.025;VQSLOD=0.9840;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:35.26:0,35,351	0/1:6,0:6:7.08:7,0,39	0/0:22,0:14:31.91:0,32,345	0/0:27,0:17:45.02:0,45,461	1/1:15,0:15:1.97:158,2,0	0/0:9,0:9:8.84:0,9,71	0/0:25,0:23:47.09:0,47,522	0/1:26,0:25:43.59:44,0,357	1/1:7,0:6:3.68:43,4,0	0/1:13,0:13:16.13:225,0,16	1/1:14,0:13:17.56:114,18,0	1/1:18,0:17:29.11:229,29,0	0/1:13,0:12:29.58:147,0,30	1/1:12,0:11:11.99:110,12,0	1/1:19,0:19:38.50:294,38,0	1/1:17,0:17:21.29:266,21,0	1/1:21,0:19:27.99:330,28,0	0/1:16,0:15:99:150,0,129	0/1:25,0:22:9.81:10,0,532	0/0:12,0:12:24.83:0,25,252	0/0:30,0:27:51.37:0,51,623	1/1:14,0:13:12.40:92,12,0	0/1:14,0:10:31.07:31,0,49	0/0:6,13:17:2.32:0,2,12	0/0:20,0:19:43.32:0,43,511	1/1:8,0:8:17.45:122,17,0	0/1:11,0:8:22.86:46,0,23	1/1:8,0:6:17.98:156,18,0
chr10	11905877	.	T	TCG	1033.32	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=-4.571;DP=475;FS=5.701;HRun=0;HaplotypeScore=73.9875;InbreedingCoeff=0.7077;MQ=56.03;MQ0=31;MQRankSum=-2.317;QD=11.23;ReadPosRankSum=0.217;VQSLOD=2.5643;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:22.82:0,23,178	0/0:6,0:6:6.47:0,6,52	0/0:19,0:11:28.51:0,29,261	0/0:25,0:15:38.18:0,38,430	0/0:18,0:18:29.86:0,30,235	0/0:11,0:11:5.99:0,6,50	0/0:27,0:23:44.80:0,45,388	0/1:26,0:25:5.15:263,0,5	0/0:7,0:6:3.45:0,3,26	0/0:13,0:12:35.73:0,36,302	0/0:14,0:13:14.92:0,15,113	0/0:18,0:17:23.79:0,24,181	0/0:13,0:12:22.16:0,22,171	0/0:13,0:12:12.33:0,12,85	0/0:20,0:20:35.66:0,36,280	0/0:19,0:19:17.85:0,18,137	0/0:22,0:20:25.36:0,25,207	0/0:16,0:15:27.68:0,28,226	1/1:15,5:17:27.66:268,28,0	1/1:16,0:15:18.29:192,18,0	1/1:30,0:26:30.12:456,30,0	0/0:16,0:15:8.99:0,9,76	0/0:16,0:11:8.90:0,9,66	0/0:21,0:18:5.87:0,6,41	0/0:20,0:19:43.75:0,44,385	0/0:9,0:9:20.94:0,21,174	0/0:12,0:9:12.07:0,12,103	0/0:8,0:6:17.93:0,18,140
chr10	11906062	.	G	GAAAAA	5231.23	PASS	AB=0.865;AC=47;AF=0.839;AN=56;BaseQRankSum=2.708;DP=383;FS=0.000;HRun=14;HaplotypeScore=103.7540;InbreedingCoeff=0.4508;MQ=37.58;MQ0=18;MQRankSum=-5.586;QD=16.00;ReadPosRankSum=-4.186;VQSLOD=0.8932;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:29:49.52:0,50,602	1/1:3,0:4:8.99:109,9,0	1/1:7,0:4:0.38:22,0,0	0/0:10,0:4:4.68:0,5,40	1/1:11,0:10:14.17:97,14,0	0/1:13,0:13:0.87:129,0,1	1/1:22,0:20:25.89:400,26,0	1/1:21,0:20:32.11:549,32,0	1/1:3,7:11:3.01:78,3,0	1/1:18,0:17:31.88:299,32,0	0/1:7,0:7:16.65:75,0,17	1/1:15,0:15:19.17:243,19,0	1/1:9,0:9:11.82:82,12,0	1/1:8,0:7:10.88:93,11,0	1/1:7,10:19:9.92:148,10,0	1/1:7,1:8:10.63:124,11,0	1/1:17,1:16:27.89:405,28,0	0/1:9,0:16:12.51:71,0,13	1/1:19,0:15:31.90:451,32,0	1/1:16,0:17:42.87:617,43,0	1/1:9,0:7:11.98:99,12,0	1/1:3,5:8:7.74:159,8,0	1/1:11,0:9:12.03:102,12,0	1/1:11,1:13:14.08:171,14,0	0/0:13,0:15:14.41:0,14,351	1/1:6,0:17:34.66:427,35,0	1/1:12,0:11:13.83:203,14,0	1/1:6,0:5:10.19:81,10,0
chr10	11907153	.	CTT	C	5937.33	PASS	AB=1.000;AC=37;AF=0.661;AN=56;BaseQRankSum=0.794;DP=552;FS=2.857;HRun=14;HaplotypeScore=80.3993;InbreedingCoeff=0.8929;MQ=65.80;MQ0=2;MQRankSum=-0.746;QD=16.31;ReadPosRankSum=8.449;VQSLOD=3.7805;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:27:60.10:0,60,734	1/1:0,6:6:12.01:111,12,0	0/0:21,0:11:17.40:0,17,134	0/1:17,0:11:28.59:29,0,122	1/1:11,12:25:27.50:290,27,0	0/0:16,0:19:33.90:0,34,398	0/0:13,0:15:41.46:0,41,410	0/0:15,0:28:47.98:0,48,435	1/1:3,7:11:17.65:208,18,0	1/1:9,12:24:44.16:368,44,0	1/1:6,12:20:35.41:301,35,0	1/1:1,14:17:35.64:364,36,0	1/1:6,12:19:35.68:317,36,0	1/1:4,17:22:20.81:239,21,0	1/1:4,13:19:32.58:336,33,0	1/1:7,6:13:20.94:194,21,0	1/1:3,23:27:65.51:579,66,0	1/1:2,30:32:66.05:611,66,0	0/0:13,0:22:45:0,45,444	0/0:14,0:30:65.11:0,65,538	0/0:1,0:5:6.48:0,6,58	1/1:2,18:21:19.41:410,19,0	1/1:4,12:19:20.06:272,20,0	1/1:0,9:9:21.02:194,21,0	0/0:19,0:21:52.36:0,52,571	1/1:5,19:24:56.99:527,57,0	1/1:5,22:30:37.65:438,38,0	1/1:2,6:9:17.70:151,18,0
chr10	11908567	.	AAGTCAAATCTAAAGATACTCTCCAC	A	8105	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=11.610;DP=786;FS=2.501;HRun=0;HaplotypeScore=492.5472;InbreedingCoeff=0.9969;MQ=75.35;MQ0=0;MQRankSum=-6.089;QD=83.56;ReadPosRankSum=0.848;VQSLOD=3.2531;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,160,17607	0/0:17,0:17:51.16:0,51,5553	0/0:14,0:14:40.02:0,40,2141	0/0:18,0:18:51.17:0,51,3115	0/0:34,0:34:99:0,99,11132	0/0:30,0:30:90.31:0,90,9337	0/0:24,0:24:72.23:0,72,7392	1/1:15,9:24:27.04:647,27,0	0/0:30,0:30:90.31:0,90,8697	0/0:23,0:23:69.24:0,69,6769	0/0:17,0:17:51.18:0,51,5961	0/0:38,0:38:99:0,114,10709	0/0:36,0:36:99:0,108,10987	0/0:32,0:32:90.31:0,90,9212	0/0:34,0:34:99:0,102,11121	0/0:42,0:42:99:0,126,13423	0/0:24,0:24:72.25:0,72,7682	0/0:15,0:15:45.15:0,45,4592	1/1:8,13:21:39.12:2340,39,0	1/1:6,25:31:69.12:4022,69,0	1/1:11,10:21:18.06:1096,18,0	0/0:24,0:24:72.25:0,72,7088	0/0:16,0:16:48.16:0,48,4881	0/0:41,0:41:99:0,120,13047	0/0:31,0:31:90.31:0,90,9194	0/0:48,0:48:99:0,144,14911	0/0:40,0:40:99:0,114,11527	0/0:8,0:8:24.08:0,24,2846
chr10	11908685	.	T	TAAA	2218.62	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-2.132;DP=754;FS=0.000;HRun=9;HaplotypeScore=107.8990;InbreedingCoeff=0.9978;MQ=72.24;MQ0=0;MQRankSum=-2.063;QD=40.34;ReadPosRankSum=1.895;VQSLOD=3.4052;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:34:85.77:0,86,1052	0/0:12,0:13:36.04:0,36,434	0/0:31,0:25:47.42:0,47,504	0/0:16,0:13:21.03:0,21,265	0/0:33,0:33:87.25:0,87,1086	1/1:1,21:28:69.15:1216,69,0	1/1:6,21:27:57.20:1124,57,0	0/0:36,0:36:72.14:0,72,909	0/0:19,0:19:54.16:0,54,669	0/0:29,0:29:81.23:0,81,1003	0/0:24,0:24:51.11:0,51,644	0/0:25,0:25:63.17:0,63,780	0/0:24,0:24:54.10:0,54,667	0/0:31,0:31:81.23:0,81,1020	0/0:32,0:33:92.24:0,92,1087	0/0:40,0:40:99:0,102,1260	0/0:29,0:29:72.17:0,72,909	0/0:19,0:19:41.75:0,42,497	0/0:24,0:24:59.93:0,60,704	0/0:28,0:28:66.17:0,66,821	0/0:18,0:18:47.89:0,48,544	0/0:25,0:25:60.13:0,60,758	0/0:23,0:23:57.14:0,57,707	0/0:17,0:17:45.07:0,45,534	0/0:21,0:21:57.13:0,57,706	0/0:43,0:43:99:0,117,1454	0/0:43,0:43:97.77:0,98,1217	0/0:20,0:20:60.16:0,60,731
chr10	11908986	.	CA	C	1663.74	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.870;DP=812;FS=0.547;HRun=3;HaplotypeScore=76.2609;InbreedingCoeff=1.0000;MQ=81.60;MQ0=0;MQRankSum=-0.747;QD=29.71;ReadPosRankSum=1.093;VQSLOD=3.2566;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,153,2145	0/0:13,0:13:39.10:0,39,539	0/0:23,0:23:63.21:0,63,905	0/0:20,0:20:54.18:0,54,759	0/0:41,0:41:99:0,117,1633	1/1:0,24:24:69.22:855,69,0	1/1:0,32:32:75.24:930,75,0	0/0:40,0:40:99:0,117,1635	0/0:22,0:22:66.20:0,66,930	0/0:39,0:39:99:0,117,1652	0/0:19,0:19:51.16:0,51,718	0/0:28,0:28:81.26:0,81,1141	0/0:28,0:28:84.26:0,84,1174	0/0:24,0:24:72.24:0,72,1037	0/0:39,0:39:99:0,114,1642	0/0:34,0:34:99:0,99,1425	0/0:37,0:37:99:0,111,1595	0/0:22,0:22:60.20:0,60,864	0/0:22,0:22:63.21:0,63,906	0/0:26,0:26:69.23:0,69,993	0/0:32,0:32:90.29:0,90,1278	0/0:34,0:34:99:0,102,1468	0/0:27,0:27:81.27:0,81,1165	0/0:25,0:25:75.25:0,75,1079	0/0:25,0:25:72.24:0,72,1037	0/0:31,0:31:93.31:0,93,1339	0/0:34,0:34:99:0,99,1421	0/0:20,0:20:57.19:0,57,819
chr10	11911488	.	GA	G	976.28	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.967;DP=786;FS=13.676;HRun=9;HaplotypeScore=72.6251;InbreedingCoeff=0.9936;MQ=78.71;MQ0=0;MQRankSum=-1.771;QD=18.08;ReadPosRankSum=0.581;VQSLOD=2.7676;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:87.26:0,87,1004	0/0:9,0:9:21.06:0,21,242	0/0:18,0:17:33.06:0,33,350	0/0:21,0:21:51.01:0,51,542	0/0:27,0:27:69.62:0,70,774	1/1:3,28:31:78.03:714,78,0	1/1:4,19:23:42.01:384,42,0	0/0:48,1:49:99:0,108,1447	0/0:29,0:29:81.23:0,81,925	0/0:33,0:33:87.24:0,87,988	0/0:27,0:27:75.19:0,75,839	0/0:53,0:53:99:0,110,1452	0/0:28,0:28:84.25:0,84,969	0/0:26,0:26:78.15:0,78,864	0/0:37,1:38:62.79:0,63,968	0/0:32,0:32:84.25:0,84,969	0/0:23,0:23:63.13:0,63,703	0/0:21,0:21:60.13:0,60,677	0/0:26,0:26:69.19:0,69,785	0/0:24,0:24:66.18:0,66,752	0/0:24,0:24:39.17:0,39,542	0/0:34,0:34:93.28:0,93,1072	0/0:23,0:23:60.17:0,60,684	0/0:29,0:29:84.22:0,84,948	0/0:24,0:24:66.17:0,66,743	0/0:36,0:37:99:0,102,1149	0/0:40,0:40:99:0,105,1192	0/0:6,0:6:18.05:0,18,208
chr10	11913775	.	AACACAC	A	2805.23	PASS	AB=0.892;AC=33;AF=0.717;AN=46;BaseQRankSum=6.450;DP=614;FS=2.130;HRun=0;HaplotypeScore=137.7287;InbreedingCoeff=0.2488;MQ=58.69;MQ0=10;MQRankSum=-5.823;QD=6.93;ReadPosRankSum=-0.072;VQSLOD=2.6960;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:33:35.24:0,35,859	1/1:8,3:11:15.05:302,15,0	./.	./.	./.	1/1:14,2:17:9.03:163,9,0	1/1:13,2:15:3.01:60,3,0	0/0:33,0:33:2.96:0,3,38	1/1:14,9:23:21.07:422,21,0	0/1:20,0:19:13.92:77,0,14	0/1:11,3:15:5.72:93,0,6	1/1:20,1:25:12.04:186,12,0	1/1:13,1:17:9.03:144,9,0	1/1:26,2:30:11.78:204,12,0	1/1:22,1:24:6.02:102,6,0	1/1:23,9:34:26.90:420,27,0	0/0:19,0:19:0:0,0,0	0/1:21,0:20:8.38:8,0,150	1/1:10,0:14:9.03:125,9,0	1/1:14,0:27:18.36:252,18,0	./.	0/1:15,4:19:17.86:54,0,18	1/1:14,5:19:6.45:63,6,0	1/1:21,5:27:5.88:121,6,0	0/0:21,0:21:33.11:0,33,910	1/1:18,0:19:0.65:38,1,0	0/1:22,4:27:12.99:113,0,13	./.
chr10	11914077	.	C	CAA	8921.41	PASS	AB=0.656;AC=44;AF=0.786;AN=56;BaseQRankSum=-2.450;DP=654;FS=6.931;HRun=12;HaplotypeScore=102.9340;InbreedingCoeff=0.2960;MQ=79.96;MQ0=2;MQRankSum=-0.463;QD=14.80;ReadPosRankSum=-2.919;VQSLOD=3.1031;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:21:44.59:0,45,447	1/1:2,9:12:27.09:365,27,0	0/1:17,0:17:7.70:50,0,8	0/0:18,0:18:10.13:0,10,90	1/1:5,20:27:53.92:629,54,0	1/1:7,0:21:4.14:164,4,0	1/1:7,1:19:7.34:172,7,0	0/1:6,2:23:46.93:154,0,47	0/1:6,12:21:0.98:208,0,1	1/1:12,16:34:72.31:790,72,0	1/1:4,26:32:68.66:893,69,0	1/1:7,22:32:1.86:288,2,0	1/1:7,18:27:29.07:349,29,0	1/1:8,17:26:34.57:387,35,0	0/1:8,19:29:66.96:352,0,67	1/1:9,20:29:47.59:613,48,0	1/1:10,25:35:0.19:615,0,0	1/1:3,12:16:29.07:350,29,0	1/1:9,0:17:20.43:81,20,0	0/1:10,0:29:40.32:118,0,40	0/1:7,1:29:61.55:111,0,62	1/1:6,19:26:41.41:466,41,0	1/1:7,15:22:32.70:405,33,0	1/1:1,13:14:21.07:294,21,0	0/0:12,0:12:29.98:0,30,277	1/1:8,14:28:44.96:628,45,0	1/1:6,17:26:21.44:306,21,0	1/1:3,5:9:10.19:132,10,0
chr10	11915547	.	TAC	T	2870.16	PASS	AB=0.778;AC=37;AF=0.661;AN=56;BaseQRankSum=-6.046;DP=520;FS=10.405;HRun=0;HaplotypeScore=81.3907;InbreedingCoeff=0.6394;MQ=71.17;MQ0=18;MQRankSum=1.604;QD=10.11;ReadPosRankSum=0.254;VQSLOD=2.1889;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:34.45:0,34,657	1/1:0,3:3:3:27,3,0	0/0:48,0:24:19.66:0,20,236	0/0:53,0:27:0.52:0,1,340	1/1:4,5:9:14.84:113,15,0	0/0:10,0:11:18:0,18,174	0/1:6,1:25:5.52:6,0,230	0/0:20,0:23:30.01:0,30,281	1/1:4,10:14:15.05:181,15,0	1/1:9,7:16:18.01:184,18,0	1/1:4,6:11:8.69:98,9,0	1/1:3,13:15:11.97:117,12,0	1/1:2,9:11:9.03:109,9,0	1/1:9,6:14:30.01:295,30,0	1/1:9,4:13:35.95:330,36,0	1/1:3,15:17:8.76:98,9,0	1/1:14,10:22:6.02:72,6,0	1/1:18,2:18:45.02:442,45,0	0/0:16,1:22:20.80:0,21,522	0/0:11,0:19:38.05:0,38,358	0/0:18,0:24:53.93:0,54,630	1/1:8,12:20:5.74:72,6,0	1/1:2,3:6:17.86:174,18,0	1/1:8,10:17:24.02:254,24,0	0/1:8,3:11:24.17:24,0,108	1/1:9,5:14:32.91:301,33,0	1/1:1,9:8:9.03:109,9,0	0/1:3,7:9:36.19:64,0,36
chr10	11915573	.	C	CG	2363.05	PASS	AB=0.940;AC=40;AF=0.714;AN=56;BaseQRankSum=0.693;DP=470;FS=17.230;HRun=11;HaplotypeScore=101.2688;InbreedingCoeff=-0.1285;MQ=58.64;MQ0=17;MQRankSum=-1.672;QD=5.63;ReadPosRankSum=-3.699;VQSLOD=-0.2364;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:25:19.10:0,19,128	1/1:3,0:3:1.48:21,1,0	0/0:24,0:9:11.25:0,11,59	0/1:34,0:20:13.25:13,0,68	1/1:12,0:12:5.69:33,6,0	0/1:12,1:13:28.33:88,0,28	0/1:17,5:22:61.11:88,0,61	1/1:12,0:12:10.91:48,11,0	0/1:13,0:14:6.51:103,0,7	1/1:10,0:11:3.71:38,4,0	1/1:5,1:6:4.56:35,5,0	0/1:15,2:16:25.44:112,0,25	1/1:15,1:16:20.61:177,21,0	0/1:17,1:18:36.68:165,0,37	0/1:17,1:19:33.01:181,0,33	1/1:14,1:14:16.54:142,17,0	0/1:23,1:22:5.14:168,0,5	0/1:15,1:16:83.31:117,0,83	1/1:23,0:23:40.80:165,41,0	1/1:17,0:18:25.55:120,26,0	1/1:24,0:21:31.28:132,31,0	1/1:10,0:10:3:25,3,0	0/1:11,1:12:14.24:44,0,14	0/1:22,1:21:49.19:105,0,49	0/1:12,0:12:40.09:40,0,45	1/1:9,2:11:6:55,6,0	1/1:24,0:22:30.84:253,31,0	1/1:9,0:9:6.47:56,6,0
chr10	11915578	.	G	GGT	2178.79	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-5.543;DP=450;FS=38.789;HRun=0;HaplotypeScore=81.3185;InbreedingCoeff=0.8480;MQ=62.03;MQ0=11;MQRankSum=-2.345;QD=28.67;ReadPosRankSum=4.607;VQSLOD=2.0651;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:24:49.64:0,50,484	0/0:3,0:3:3.89:0,4,30	0/0:22,0:9:23.50:0,23,215	0/0:31,0:18:30.42:0,30,247	0/0:11,0:11:12.93:0,13,104	0/0:12,0:12:8.31:0,8,157	0/0:21,0:21:46.78:0,47,421	1/1:4,8:14:21.02:309,21,0	0/0:14,0:14:20.35:0,20,177	0/0:11,0:11:27.03:0,27,220	0/0:5,0:5:11.68:0,12,91	0/0:18,0:17:25.07:0,25,215	0/0:14,0:14:0.86:0,1,74	0/0:23,0:22:41.71:0,42,363	0/0:17,0:17:37.14:0,37,301	0/0:13,0:13:27.63:0,28,186	0/0:23,0:22:36.05:0,36,299	0/0:17,0:17:42.35:0,42,409	1/1:3,20:23:63.01:933,63,0	1/1:3,12:16:15.66:491,16,0	1/1:5,17:21:39.02:602,39,0	0/0:9,0:9:18.84:0,19,149	0/0:10,0:10:11.68:0,12,128	0/0:23,0:22:41.58:0,42,366	0/0:10,0:10:18.47:0,18,185	0/0:10,0:10:18.87:0,19,134	0/0:23,0:22:31.97:0,32,199	0/0:9,0:9:17.82:0,18,133
chr10	11915672	.	CTGTGTG	C	1129.89	PASS	AB=0.909;AC=31;AF=0.674;AN=46;BaseQRankSum=1.345;DP=576;FS=10.717;HRun=0;HaplotypeScore=124.5555;InbreedingCoeff=0.3817;MQ=71.80;MQ0=22;MQRankSum=-4.731;QD=3.80;ReadPosRankSum=-0.276;VQSLOD=1.8309;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:31,0:31:0.61:2,1,0	1/1:5,1:6:3.01:60,3,0	./.	0/0:60,0:31:0:0,0,0	1/1:16,0:16:3.01:42,3,0	0/0:19,0:19:24.06:0,24,466	0/0:26,0:26:24.08:0,24,616	0/0:25,0:24:3.48:0,3,47	./.	1/1:13,1:14:2.52:59,3,0	./.	1/1:24,1:23:3.01:60,3,0	0/0:12,0:12:2.99:0,3,23	1/1:18,1:19:3.01:60,3,0	1/1:13,3:17:12.04:222,12,0	1/1:14,5:19:12.04:223,12,0	1/1:14,3:17:6.02:120,6,0	0/0:24,1:24:4.37:0,4,91	0/0:29,0:28:2.99:0,3,24	1/1:14,0:16:1.43:19,1,0	./.	1/1:19,0:20:3.01:38,3,0	1/1:10,0:12:4.26:45,4,0	0/1:27,1:30:51.26:55,0,51	./.	1/1:24,0:26:6.02:82,6,0	1/1:20,0:19:3.01:60,3,0	1/1:4,2:6:6.02:120,6,0
chr10	11916054	.	T	TA	188.73	PASS	AB=0.901;AC=6;AF=0.107;AN=56;BaseQRankSum=-0.189;DP=595;FS=4.102;HRun=14;HaplotypeScore=75.5018;InbreedingCoeff=0.4561;MQ=73.10;MQ0=5;MQRankSum=-0.959;QD=2.45;ReadPosRankSum=-1.869;VQSLOD=-0.4388;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:70.62:0,71,456	0/0:6,0:6:11.82:0,12,77	0/0:46,0:28:11.64:0,12,71	0/0:18,0:12:7.14:0,7,32	0/1:17,4:21:34.24:34,0,147	1/1:6,1:18:23:130,23,0	1/1:3,2:12:23.04:138,23,0	0/0:22,1:26:35.74:0,36,331	0/0:18,0:18:35.24:0,35,226	0/0:26,0:26:56.07:0,56,362	0/1:25,1:26:20.50:21,0,221	0/0:17,1:18:17.99:0,18,241	0/0:19,0:19:38.32:0,38,248	0/0:26,0:27:63.28:0,63,392	0/0:22,0:22:38.32:0,38,248	0/0:21,2:29:8.57:0,9,273	0/0:24,2:28:4.46:0,4,262	0/0:27,2:29:9.33:0,9,312	0/0:18,0:20:13.29:0,13,190	0/0:14,0:15:3.37:0,3,128	0/0:5,0:5:11.77:0,12,77	0/0:17,0:17:40.64:0,41,249	0/0:21,0:21:40.99:0,41,258	0/0:15,1:16:8.32:0,8,169	0/0:13,1:15:8.17:0,8,172	0/0:24,0:24:16.69:0,17,195	0/0:24,1:27:30.64:0,31,310	0/0:9,0:9:13.60:0,14,81
chr10	11919145	.	C	CA	1841.61	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.902;DP=697;FS=1.722;HRun=7;HaplotypeScore=69.3512;InbreedingCoeff=0.9984;MQ=88.08;MQ0=0;MQRankSum=-4.626;QD=27.90;ReadPosRankSum=1.174;VQSLOD=4.4399;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:81.12:0,81,777	0/0:9,0:9:24.03:0,24,232	0/0:22,0:22:57.06:0,57,540	0/0:28,0:28:63.07:0,63,598	0/0:25,0:25:69.10:0,69,666	1/1:3,32:33:84.26:1014,84,0	1/1:2,29:31:55.28:950,55,0	0/0:37,0:37:99:0,99,956	0/0:19,0:19:45.07:0,45,435	0/0:21,0:21:51.07:0,51,488	0/0:23,0:23:54.07:0,54,521	0/0:22,0:22:66.11:0,66,637	0/0:22,0:22:57.08:0,57,550	0/0:24,0:24:66.10:0,66,637	0/0:25,0:25:69.10:0,69,661	0/0:35,0:35:99:0,99,951	0/0:27,0:27:72.09:0,72,690	0/0:21,0:21:60.09:0,60,578	0/0:24,0:24:54.08:0,54,521	0/0:38,0:38:99:0,102,979	0/0:21,0:21:57.06:0,57,543	0/0:26,0:26:75.12:0,75,724	0/0:18,0:18:48.06:0,48,457	0/0:15,0:15:45.07:0,45,435	0/0:25,0:25:63.09:0,63,608	0/0:34,0:34:87.11:0,87,835	0/0:31,0:31:90.13:0,90,863	0/0:11,0:11:27.03:0,27,261
chr10	11919526	.	AC	A	16956.17	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=6.601;DP=631;FS=3.559;HRun=4;HaplotypeScore=64.6756;InbreedingCoeff=0.9952;MQ=91.10;MQ0=0;MQRankSum=-7.467;QD=32.55;ReadPosRankSum=4.437;VQSLOD=5.4462;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:87.29:0,87,1204	1/1:0,11:11:33.10:396,33,0	0/0:35,0:35:99:0,102,1421	0/0:14,0:14:39.13:0,39,524	1/1:0,23:23:69.21:828,69,0	1/1:1,30:31:78.24:936,78,0	1/1:0,14:14:27.08:324,27,0	1/1:2,21:23:60.16:698,60,0	1/1:0,14:14:42.13:504,42,0	1/1:0,24:24:72.22:864,72,0	1/1:1,31:32:78.24:936,78,0	1/1:1,20:21:57.17:684,57,0	1/1:0,26:26:72.22:864,72,0	1/1:0,19:19:45.14:540,45,0	1/1:0,27:27:75.23:900,75,0	1/1:0,18:18:48.15:576,48,0	1/1:0,18:18:51.16:612,51,0	1/1:0,18:18:54.17:648,54,0	1/1:2,12:14:36.10:422,36,0	1/1:3,33:36:99:1221,102,0	1/1:1,23:24:63.19:756,63,0	1/1:0,26:26:75.23:900,75,0	1/1:1,25:26:66.20:792,66,0	1/1:0,16:16:48.15:576,48,0	0/0:29,0:29:87.26:0,87,1182	1/1:0,21:21:63.19:756,63,0	1/1:0,32:32:87.26:1043,87,0	1/1:2,5:7:15.04:180,15,0
chr10	11919854	.	CA	C	1316.48	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.643;DP=726;FS=1.170;HRun=7;HaplotypeScore=70.8303;InbreedingCoeff=0.9996;MQ=90.38;MQ0=1;MQRankSum=-4.737;QD=21.94;ReadPosRankSum=0.707;VQSLOD=3.5694;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,132,1576	0/0:13,0:13:33.11:0,33,415	0/0:30,0:30:74.14:0,74,735	0/0:27,0:27:56.69:0,57,627	0/0:23,0:22:61.43:0,61,746	1/1:1,27:28:77.85:795,78,0	1/1:1,31:32:63.14:643,63,0	0/0:27,0:27:63.18:0,63,759	0/0:23,0:23:66.19:0,66,805	0/0:35,0:35:99:0,99,1193	0/0:17,0:17:48.15:0,48,596	0/0:36,0:35:99:0,102,1257	0/0:26,0:26:78.24:0,78,964	0/0:28,0:28:75.23:0,75,929	0/0:36,0:36:99:0,102,1258	0/0:27,0:27:72.21:0,72,881	0/0:34,0:34:99:0,99,1217	0/0:17,0:17:48.12:0,48,575	0/0:22,0:22:60.19:0,60,754	0/0:17,0:17:48.11:0,48,586	0/0:32,0:32:87.26:0,87,1069	0/0:19,0:19:57.18:0,57,716	0/0:20,0:20:51.15:0,51,630	0/0:36,0:36:99:0,108,1318	0/0:23,0:23:63.19:0,63,781	0/0:21,0:21:60.19:0,60,742	0/0:21,0:20:57.18:0,57,717	0/0:10,0:10:30.10:0,30,377
chr10	11921551	.	TACTGTCTTGATTCTCAA	T	3156.15	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.769;DP=607;FS=1.780;HRun=0;HaplotypeScore=268.0849;InbreedingCoeff=0.9972;MQ=88.86;MQ0=0;MQRankSum=-7.880;QD=112.72;ReadPosRankSum=2.070;VQSLOD=3.5117;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:69.24:0,69,5181	0/0:14,0:14:42.14:0,42,3332	0/0:31,0:31:90.28:0,90,4999	0/0:18,0:18:51.16:0,51,2114	0/0:32,0:32:87.30:0,87,6963	1/1:3,16:20:45.15:2234,45,0	1/1:0,8:8:21.07:1043,21,0	0/0:38,0:38:99:0,111,7023	0/0:16,0:16:48.16:0,48,3802	0/0:24,0:24:72.25:0,72,5639	0/0:22,0:22:66.23:0,66,5160	0/0:12,0:12:36.11:0,36,2681	0/0:19,0:19:57.20:0,57,4374	0/0:16,0:16:48.16:0,48,4016	0/0:23,0:23:69.24:0,69,5212	0/0:19,0:19:57.20:0,57,4377	0/0:30,0:30:90.31:0,90,6858	0/0:25,0:25:72.23:0,72,5201	0/0:21,0:21:63.21:0,63,4085	0/0:30,0:30:87.30:0,87,6683	0/0:13,0:13:39.13:0,39,3032	0/0:27,0:27:81.28:0,81,5613	0/0:13,0:13:39.13:0,39,2782	0/0:16,0:16:48.16:0,48,3938	0/0:21,0:21:63.22:0,63,5148	0/0:24,0:24:72.25:0,72,4821	0/0:42,0:42:99:0,123,9589	0/0:10,0:10:27.09:0,27,2057
chr10	11921984	.	GACACAC	G	2792.83	PASS	AB=0.724;AC=31;AF=0.574;AN=54;BaseQRankSum=8.558;DP=694;FS=17.629;HRun=0;HaplotypeScore=147.8178;InbreedingCoeff=0.3742;MQ=58.64;MQ0=38;MQRankSum=-5.238;QD=6.90;ReadPosRankSum=-1.052;VQSLOD=1.5212;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:37:47.13:0,47,1205	1/1:7,1:10:4.88:65,5,0	0/0:64,0:20:2.04:0,2,6	0/0:57,0:16:3.01:0,3,38	1/1:11,5:16:5.90:122,6,0	0/0:14,0:18:27.03:0,27,589	0/0:16,0:19:8.85:0,9,194	./.	1/1:10,8:20:4.45:252,4,0	0/0:11,0:17:6.59:0,7,115	0/0:8,0:13:4.16:0,4,35	1/1:16,15:32:10.46:393,10,0	1/1:10,10:22:2.16:367,2,0	1/1:13,13:27:20.55:462,21,0	0/1:22,12:34:10.52:396,0,11	0/1:12,0:26:4.46:4,0,30	0/0:14,0:27:3.69:0,4,48	1/1:8,0:23:0.51:3,1,0	1/1:12,0:19:12.04:168,12,0	1/1:12,0:29:18.06:251,18,0	1/1:12,0:21:0.47:1,0,0	1/1:17,2:20:9.02:128,9,0	1/1:6,6:13:7.34:107,7,0	0/1:17,14:31:31.48:52,0,31	0/0:13,1:14:11.83:0,12,259	0/1:22,0:25:6.93:7,0,71	0/1:15,3:27:5.15:177,0,5	1/1:5,0:7:0.14:1,0,0
chr10	11923211	.	CTTTA	C	4763.18	PASS	AB=0.675;AC=35;AF=0.673;AN=52;BaseQRankSum=9.154;DP=429;FS=11.606;HRun=0;HaplotypeScore=69.7027;InbreedingCoeff=0.6687;MQ=68.00;MQ0=1;MQRankSum=1.680;QD=17.13;ReadPosRankSum=3.081;VQSLOD=3.4853;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,1:28:3.79:0,4,888	1/1:5,2:7:6.02:83,6,0	0/0:12,0:12:3.01:0,3,71	0/0:3,0:2:3.01:0,3,49	1/1:11,17:28:42.14:663,42,0	1/1:12,0:21:23.40:203,23,0	./.	0/0:54,0:54:51.64:0,52,1135	1/1:5,3:8:9.03:142,9,0	1/1:7,5:12:15.05:237,15,0	1/1:4,5:9:12.04:189,12,0	1/1:8,2:10:6.02:95,6,0	1/1:6,8:14:18.06:284,18,0	1/1:5,2:7:6.02:95,6,0	1/1:7,4:11:6.02:95,6,0	1/1:9,7:16:21.07:332,21,0	1/1:11,24:35:51.17:805,51,0	0/1:14,13:26:29.45:219,0,29	0/0:16,0:16:24.08:0,24,571	0/0:10,0:10:15.05:0,15,337	0/0:9,0:9:6.02:0,6,142	./.	1/1:4,3:7:5.52:94,6,0	1/1:3,2:5:6.02:95,6,0	0/0:7,0:7:9.03:0,9,214	1/1:14,15:29:45.10:661,45,0	1/1:10,6:16:15.05:237,15,0	1/1:6,10:16:15.05:237,15,0
chr10	11923488	.	A	AT	748.23	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-7.370;DP=490;FS=5.445;HRun=5;HaplotypeScore=45.8355;InbreedingCoeff=0.8931;MQ=81.57;MQ0=0;MQRankSum=-3.375;QD=28.78;ReadPosRankSum=1.143;VQSLOD=3.8103;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:53.25:0,53,599	0/0:5,0:5:12.03:0,12,129	0/0:14,0:14:33.06:0,33,340	0/0:14,0:14:33.78:0,34,305	0/0:27,0:27:81.20:0,81,870	1/1:0,17:17:45.15:592,45,0	1/1:1,8:9:21.07:276,21,0	0/0:33,0:33:84.20:0,84,896	0/0:15,0:15:36.08:0,36,380	0/0:17,0:17:48.10:0,48,504	0/0:19,0:19:51.11:0,51,539	0/0:17,0:17:39.06:0,39,400	0/0:13,0:13:36.09:0,36,387	0/0:12,0:12:30.06:0,30,313	0/0:24,0:24:57.13:0,57,606	0/0:21,0:21:51.09:0,51,525	0/0:27,0:27:75.19:0,75,806	0/0:29,0:29:84.19:0,84,892	0/0:16,0:16:42.10:0,42,446	0/0:20,0:20:60.14:0,60,638	0/0:14,0:13:42.11:0,42,451	0/0:1,0:1:3.01:0,3,32	0/0:6,0:6:15.04:0,15,160	0/0:17,0:17:45.11:0,45,484	0/0:20,0:20:60.14:0,60,639	0/0:26,0:26:75.17:0,75,794	0/0:20,0:20:57.13:0,57,605	0/0:14,0:14:27.07:0,27,290
chr10	11923763	.	T	TA	1791.74	PASS	AB=0.760;AC=8;AF=0.143;AN=56;BaseQRankSum=-4.097;DP=620;FS=1.594;HRun=8;HaplotypeScore=90.7981;InbreedingCoeff=0.7574;MQ=74.70;MQ0=0;MQRankSum=0.614;QD=18.86;ReadPosRankSum=-4.013;VQSLOD=2.4533;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:87:0,87,789	0/0:11,0:11:26.99:0,27,242	0/0:27,0:26:46.20:0,46,450	0/1:16,0:17:5.81:6,0,201	0/0:30,0:30:65.96:0,66,590	0/0:19,0:19:48.02:0,48,439	0/0:20,0:20:51.01:0,51,466	1/1:7,25:32:72.13:790,72,0	0/0:24,0:24:63.26:0,63,595	0/0:32,0:32:75:0,75,678	0/0:19,0:19:53.40:0,53,475	0/0:36,1:37:67.39:0,67,860	0/0:23,0:23:63.03:0,63,576	0/0:14,0:14:42.01:0,42,381	0/0:32,0:32:84.01:0,84,761	0/0:35,0:35:90.03:0,90,819	0/0:27,0:27:68.99:0,69,623	0/0:29,0:29:77.98:0,78,701	0/1:5,14:19:6.84:412,0,7	1/1:2,14:16:41.94:424,42,0	1/1:1,10:11:27.08:312,27,0	0/0:8,0:8:21:0,21,192	0/0:10,0:10:29.99:0,30,265	0/0:19,0:19:50.98:0,51,458	0/0:19,0:19:48.03:0,48,439	0/0:28,0:28:78.04:0,78,714	0/0:23,0:22:60.03:0,60,549	0/0:5,0:5:15.01:0,15,137
chr10	11927421	.	C	CAA	10425.59	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-6.891;DP=650;FS=10.405;HRun=13;HaplotypeScore=99.4136;InbreedingCoeff=0.9135;MQ=71.51;MQ0=1;MQRankSum=-0.754;QD=21.15;ReadPosRankSum=-2.504;VQSLOD=2.7114;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:26:40.15:0,40,422	1/1:4,5:9:12.04:163,12,0	0/0:27,0:15:1.99:0,2,132	0/0:28,0:17:6.47:0,6,52	1/1:7,26:37:88.59:1044,89,0	0/0:29,0:29:50.82:0,51,155	0/0:17,0:17:19.21:0,19,62	1/1:11,13:27:50.53:602,51,0	1/1:2,9:14:16.96:265,17,0	1/1:3,17:24:62.06:696,62,0	1/1:5,20:25:59.68:764,60,0	1/1:5,19:24:27.09:359,27,0	1/1:5,19:26:35.59:427,36,0	1/1:4,10:14:19.88:245,20,0	1/1:8,20:31:41.40:507,41,0	1/1:9,23:34:67.47:824,67,0	1/1:9,18:30:29.58:363,30,0	1/1:3,17:24:38.09:441,38,0	1/1:6,17:26:62.11:717,62,0	1/1:7,13:21:40.93:461,41,0	1/1:1,3:6:9.02:110,9,0	1/1:4,10:18:37.40:393,37,0	1/1:5,18:25:43.11:561,43,0	1/1:5,11:16:21.07:284,21,0	0/0:29,0:29:57.41:0,57,490	1/1:7,12:20:41.16:458,41,0	1/1:4,12:20:35.08:410,35,0	1/1:6,10:19:29.56:331,30,0
chr10	11927434	.	AC	A	1097.84	PASS	AB=0.975;AC=5;AF=0.089;AN=56;BaseQRankSum=-0.090;DP=658;FS=3.658;HRun=2;HaplotypeScore=107.4856;InbreedingCoeff=0.7777;MQ=71.71;MQ0=2;MQRankSum=1.269;QD=13.23;ReadPosRankSum=1.146;VQSLOD=2.9271;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:55.61:0,56,717	0/0:5,0:5:11.97:0,12,95	0/0:39,0:23:24.67:0,25,303	0/1:37,0:23:11.83:12,0,114	0/0:33,0:34:93.31:0,93,675	1/1:1,27:28:72.16:897,72,0	1/1:1,15:16:26.76:317,27,0	0/0:31,0:31:82.36:0,82,685	0/0:17,0:16:37.75:0,38,272	0/0:26,0:26:74.03:0,74,579	0/0:26,0:26:71.31:0,71,558	0/0:28,0:28:50.85:0,51,425	0/0:26,0:26:44.83:0,45,364	0/0:15,0:15:32.66:0,33,237	0/0:27,0:27:36.52:0,37,364	0/0:28,0:28:74.25:0,74,567	0/0:27,0:27:44.15:0,44,325	0/0:25,0:25:41.25:0,41,311	0/0:25,0:24:55.73:0,56,450	0/0:23,0:23:53.25:0,53,408	0/0:8,0:8:20.92:0,21,163	0/0:15,0:15:43.23:0,43,338	0/0:25,0:26:62.21:0,62,481	0/0:17,0:17:29.89:0,30,234	0/0:26,0:26:50.09:0,50,744	0/0:15,0:16:47.60:0,48,368	0/0:19,0:19:39.66:0,40,307	0/0:17,0:17:44.58:0,45,349
chr10	11927619	.	A	ACTT	26437.60	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-15.029;DP=721;FS=1.251;HRun=0;HaplotypeScore=97.4804;InbreedingCoeff=0.9970;MQ=79.68;MQ0=1;MQRankSum=-4.039;QD=60.22;ReadPosRankSum=5.472;VQSLOD=6.5476;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,148,2586	1/1:0,7:7:21.07:464,21,0	0/0:25,0:22:59.56:0,60,974	0/0:29,0:29:75.10:0,75,1231	1/1:1,24:25:63.05:1286,63,0	0/0:19,0:19:57.17:0,57,950	0/0:23,0:23:63.20:0,63,1084	0/0:33,0:33:96.33:0,96,1686	1/1:4,23:29:78.19:1721,78,0	1/1:1,18:21:63.20:1369,63,0	1/1:0,17:18:48.16:1134,48,0	1/1:4,33:38:99:2290,99,0	1/1:1,30:33:90.31:2127,90,0	1/1:0,22:23:60.21:1416,60,0	1/1:1,34:35:93.32:2197,93,0	1/1:1,34:37:87.30:2055,87,0	1/1:2,24:26:60.21:1418,60,0	1/1:0,24:24:66.18:1510,66,0	0/0:18,0:18:54.17:0,54,926	0/0:24,0:24:66.21:0,66,1123	0/0:36,0:36:99:0,102,1790	1/1:1,18:19:54.14:1224,54,0	1/1:0,13:13:39.09:871,39,0	1/1:2,25:29:63.14:1387,63,0	0/0:25,0:25:75.24:0,75,1294	1/1:2,34:36:99:2412,102,0	1/1:2,15:19:54.14:1222,54,0	1/1:0,5:6:15.05:335,15,0
chr10	11928063	.	CT	C	1103.59	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.448;DP=621;FS=2.131;HRun=5;HaplotypeScore=58.5046;InbreedingCoeff=0.9980;MQ=79.59;MQ0=0;MQRankSum=-3.593;QD=27.59;ReadPosRankSum=1.584;VQSLOD=3.9362;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:66.22:0,66,902	0/0:8,0:8:24.08:0,24,328	0/0:16,0:16:42.10:0,42,539	0/0:13,0:13:33.11:0,33,437	0/0:38,0:38:99:0,111,1465	1/1:0,26:26:72.21:817,72,0	1/1:0,14:14:36.10:408,36,0	0/0:30,0:30:78.26:0,78,1067	0/0:14,0:14:42.14:0,42,575	0/0:30,0:30:90.29:0,90,1218	0/0:21,0:21:60.20:0,60,818	0/0:25,0:25:69.23:0,69,944	0/0:15,0:15:45.15:0,45,605	0/0:13,0:13:39.13:0,39,534	0/0:27,0:27:75.25:0,75,1026	0/0:30,0:30:90.30:0,90,1231	0/0:16,0:16:45.15:0,45,615	0/0:26,0:26:63.21:0,63,861	0/0:24,0:24:66.17:0,66,852	0/0:24,0:24:72.23:0,72,966	0/0:23,0:23:66.22:0,66,901	0/0:15,0:15:42.10:0,42,539	0/0:26,0:26:78.26:0,78,1067	0/0:16,0:16:45.13:0,45,598	0/0:24,0:24:72.22:0,72,954	0/0:30,0:30:84.28:0,84,1149	0/0:35,0:35:99:0,105,1436	0/0:19,1:20:26.18:0,26,746
chr10	11930102	.	TA	T	1049.27	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=4.425;DP=467;FS=3.601;HRun=1;HaplotypeScore=53.1347;InbreedingCoeff=0.9597;MQ=77.41;MQ0=0;MQRankSum=-2.997;QD=37.47;ReadPosRankSum=0.238;VQSLOD=3.8244;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:51.13:0,51,761	0/0:5,0:5:15.05:0,15,239	0/0:11,0:11:33.10:0,33,505	0/0:10,0:10:27.07:0,27,406	0/0:26,0:26:78.23:0,78,1192	1/1:0,16:16:48.16:669,48,0	1/1:0,12:12:36.12:502,36,0	0/0:20,0:20:57.17:0,57,849	0/0:16,0:16:39.13:0,39,622	0/0:25,0:25:75.24:0,75,1154	0/0:18,0:18:54.17:0,54,821	0/0:14,0:14:36.12:0,36,573	0/0:12,0:12:29.86:0,30,418	0/0:17,0:17:48.16:0,48,756	0/0:14,0:14:36.12:0,36,574	0/0:25,0:25:66.21:0,66,1031	0/0:18,0:18:48.16:0,48,764	0/0:19,0:19:48.16:0,48,754	0/0:15,0:14:42.14:0,42,666	0/0:32,0:32:90.26:0,90,1364	0/0:8,0:8:21.07:0,21,335	0/0:10,0:10:30.02:0,30,445	0/0:17,0:17:51.15:0,51,768	0/0:3,0:3:9.03:0,9,144	0/0:20,0:20:60.18:0,60,912	0/0:30,0:30:90.25:0,90,1367	0/0:24,0:24:72.23:0,72,1125	0/0:13,0:13:36.12:0,36,570
chr10	11930158	.	A	ATT	3072.89	PASS	AB=0.701;AC=40;AF=0.714;AN=56;BaseQRankSum=3.121;DP=507;FS=0.573;HRun=14;HaplotypeScore=90.3443;InbreedingCoeff=0.0817;MQ=68.52;MQ0=4;MQRankSum=-1.422;QD=6.40;ReadPosRankSum=-0.738;VQSLOD=0.5061;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:17.83:0,18,150	1/1:1,0:3:4.74:17,5,0	0/1:12,0:8:8.88:9,0,13	0/1:13,0:11:7.75:8,0,27	1/1:8,0:28:19.56:160,20,0	1/1:12,0:14:31.14:278,31,0	1/1:11,0:15:35.98:342,36,0	1/1:20,8:30:40.95:408,41,0	0/1:8,0:18:30.50:31,0,72	0/1:15,0:21:38.90:39,0,55	0/1:6,2:26:7.18:145,0,7	0/1:3,0:16:30.67:35,0,31	0/1:7,0:17:7.15:38,0,7	1/1:4,0:13:11.83:40,12,0	0/1:8,0:14:0.43:0,0,84	1/1:4,1:25:11.74:124,12,0	1/1:7,0:20:23.71:84,24,0	1/1:5,0:15:16.60:59,17,0	1/1:7,9:16:23.93:281,24,0	1/1:10,16:31:32.98:514,33,0	1/1:1,5:6:12.04:157,12,0	1/1:2,0:10:5.22:39,5,0	0/1:6,3:20:14.86:145,0,15	1/1:1,0:11:21.34:76,21,0	0/0:13,0:17:20.18:0,20,229	0/1:18,0:31:4.91:61,0,5	0/1:15,0:30:0.76:94,0,1	0/1:6,0:18:0.75:51,0,1
chr10	11931866	.	T	TCTATAAA	38148.78	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-7.403;DP=594;FS=0.864;HRun=0;HaplotypeScore=121.1787;InbreedingCoeff=0.9834;MQ=81.55;MQ0=0;MQRankSum=-14.062;QD=78.82;ReadPosRankSum=1.117;VQSLOD=5.5688;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:93.26:0,93,2128	1/1:0,4:4:12.04:478,12,0	0/0:24,0:24:54.38:0,54,1496	0/0:24,0:24:55.39:0,55,1247	1/1:7,22:32:72.12:2205,72,0	1/1:4,15:19:42.14:1645,42,0	1/1:6,11:18:42.14:1547,42,0	1/1:13,14:29:84.27:2932,84,0	1/1:3,19:26:48.16:1907,48,0	1/1:7,17:26:69.16:2678,69,0	1/1:6,20:28:75.20:2482,75,0	1/1:4,10:15:36.12:1431,36,0	1/1:3,14:20:33.11:1245,33,0	1/1:5,12:18:48.16:1841,48,0	1/1:2,23:26:66.18:2506,66,0	1/1:6,14:24:54.15:1902,54,0	1/1:11,12:26:39.13:1271,39,0	1/1:4,6:12:18.06:635,18,0	1/1:2,6:11:33.11:1075,33,0	1/1:9,20:34:75.19:2233,75,0	1/1:8,8:17:30.10:1050,30,0	1/1:5,10:16:39.13:1313,39,0	1/1:6,12:23:39.47:1240,39,0	1/1:4,5:10:16.30:539,16,0	0/0:28,0:28:81.26:0,81,2044	1/1:8,12:21:57.15:1844,57,0	1/1:2,17:20:36.12:1434,36,0	1/1:2,6:9:18.06:718,18,0
chr10	11932023	.	C	CAAAA	9761.19	PASS	AB=1.000;AC=44;AF=0.786;AN=56;BaseQRankSum=3.893;DP=568;FS=13.851;HRun=4;HaplotypeScore=169.4081;InbreedingCoeff=0.6022;MQ=57.87;MQ0=8;MQRankSum=-4.396;QD=22.34;ReadPosRankSum=-2.899;VQSLOD=0.1758;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:53.16:0,53,1336	1/1:6,0:6:17.04:175,17,0	0/0:31,0:17:38.04:0,38,473	0/0:44,0:20:50.54:0,51,519	1/1:26,0:26:53.49:546,53,0	0/1:21,0:20:33.53:114,0,34	0/1:16,0:16:41.68:53,0,42	1/1:30,0:28:57.18:814,57,0	1/1:17,0:17:26.64:293,27,0	1/1:17,0:17:32.40:328,32,0	1/1:17,0:17:40.60:335,41,0	1/1:13,0:13:30.09:285,30,0	1/1:16,0:17:42.18:420,42,0	1/1:11,0:11:26.51:270,27,0	0/1:16,0:16:16.17:198,0,16	1/1:26,0:26:25.26:378,25,0	1/1:23,1:24:53.87:634,54,0	1/1:12,1:12:22.37:276,22,0	1/1:15,2:17:22.92:378,23,0	1/1:21,6:28:81.13:1334,81,0	1/1:9,1:10:18.01:310,18,0	1/1:19,0:18:43.78:461,44,0	1/1:17,0:17:41.13:540,41,0	1/1:8,0:8:10.40:249,10,0	0/0:23,0:23:63.19:0,63,1013	0/1:22,0:22:0.54:267,0,1	1/1:28,0:28:19.18:765,19,0	1/1:15,1:16:17.19:338,17,0
chr10	11932026	.	AAC	A	4168.06	PASS	AB=0.957;AC=38;AF=0.679;AN=56;BaseQRankSum=6.028;DP=565;FS=11.205;HRun=0;HaplotypeScore=167.2798;InbreedingCoeff=0.2037;MQ=56.64;MQ0=8;MQRankSum=-5.364;QD=9.56;ReadPosRankSum=-0.769;VQSLOD=2.5956;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,1:31:66.98:0,67,1501	1/1:7,0:7:11.10:41,11,0	0/0:30,0:16:39.47:0,39,530	0/0:44,0:20:54.63:0,55,731	1/1:27,0:27:40.94:188,41,0	0/1:5,16:20:84.89:500,0,85	1/1:3,13:16:45.06:635,45,0	0/1:32,0:30:1.44:243,0,1	1/1:17,0:17:25.14:180,25,0	0/1:15,0:15:14.12:85,0,14	1/1:17,0:17:20.23:309,20,0	1/1:12,0:12:15.62:96,16,0	1/1:18,0:18:35.17:262,35,0	1/1:12,0:12:18.64:82,19,0	0/1:16,0:16:22.59:106,0,23	1/1:23,0:23:18.72:156,19,0	1/1:23,0:23:32.23:146,32,0	1/1:13,0:11:16.07:79,16,0	0/1:18,0:18:25.73:147,0,26	0/1:30,0:29:40.49:193,0,40	0/1:10,0:10:8.71:22,0,9	1/1:21,0:20:31.56:140,32,0	1/1:16,0:16:25.32:168,25,0	1/1:8,0:8:8.07:41,8,0	0/0:24,0:24:66.21:0,66,1127	0/1:22,0:22:13.11:192,0,13	0/1:26,0:26:24.04:103,0,24	0/1:16,0:16:13.36:54,0,13
chr10	11932027	.	AC	A	10396.91	PASS	AB=1.000;AC=47;AF=0.839;AN=56;BaseQRankSum=5.218;DP=557;FS=2.431;HRun=1;HaplotypeScore=136.8985;InbreedingCoeff=0.8534;MQ=55.60;MQ0=8;MQRankSum=-6.268;QD=24.24;ReadPosRankSum=-2.534;VQSLOD=4.1583;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:70.43:0,70,1237	1/1:1,6:7:20.97:232,21,0	0/0:30,0:16:38.93:0,39,465	0/0:43,0:19:53.73:0,54,560	1/1:10,18:28:68.32:721,68,0	0/1:20,0:19:21.27:155,0,21	1/1:15,0:15:43.95:259,44,0	1/1:18,13:29:63.13:619,63,0	1/1:11,5:16:47.94:462,48,0	1/1:7,8:15:25.57:412,26,0	1/1:7,10:17:44.53:413,45,0	1/1:10,2:12:35.77:311,36,0	1/1:9,9:18:50.91:503,51,0	1/1:4,8:12:33.07:386,33,0	1/1:7,8:15:18.35:317,18,0	1/1:9,14:23:66.03:723,66,0	1/1:8,15:23:56.92:613,57,0	1/1:7,6:11:23.95:261,24,0	1/1:12,6:18:22.94:327,23,0	1/1:22,9:30:75.36:593,75,0	1/1:5,3:8:11.11:126,11,0	1/1:8,12:19:55.59:610,56,0	1/1:8,8:16:45.99:445,46,0	1/1:2,6:8:17.33:201,17,0	0/0:23,0:23:69.19:0,69,952	1/1:13,8:21:41.83:511,42,0	1/1:8,18:26:53.47:788,53,0	1/1:9,7:16:29.58:408,30,0
chr10	11932032	.	AC	A	8762.44	PASS	AB=0.955;AC=41;AF=0.732;AN=56;BaseQRankSum=2.102;DP=558;FS=4.165;HRun=1;HaplotypeScore=147.8640;InbreedingCoeff=0.7008;MQ=48.56;MQ0=9;MQRankSum=-3.995;QD=22.02;ReadPosRankSum=-1.318;VQSLOD=4.4782;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:34:94.42:0,94,1255	1/1:7,0:7:20.97:232,21,0	0/0:24,0:10:22.30:0,22,291	0/0:42,0:18:50.81:0,51,641	1/1:29,1:30:75.27:787,75,0	0/0:19,0:18:40.47:0,40,301	0/0:16,0:16:43.09:0,43,248	0/1:30,2:29:99:292,0,214	1/1:13,1:14:41.97:415,42,0	1/1:17,0:17:29.27:446,29,0	1/1:15,3:18:12.19:375,12,0	1/1:8,0:8:23.79:207,24,0	1/1:16,2:18:46.53:463,47,0	1/1:12,0:12:29.79:370,30,0	1/1:10,2:12:15.29:296,15,0	1/1:21,1:22:63.02:698,63,0	1/1:24,1:25:28.42:583,28,0	1/1:14,0:12:25.85:273,26,0	0/1:20,1:21:99:154,0,153	0/1:31,1:31:99:237,0,251	1/1:9,0:9:6.81:100,7,0	1/1:19,0:18:47.03:560,47,0	1/1:15,1:16:39.38:402,39,0	1/1:8,0:8:20.29:216,20,0	0/0:25,0:25:75.21:0,75,1035	1/1:21,1:22:44.70:530,45,0	1/1:24,0:24:14.22:696,14,0	1/1:18,0:18:31.28:430,31,0
chr10	11932047	.	AC	A	3067.23	PASS	AB=0.962;AC=35;AF=0.625;AN=56;BaseQRankSum=6.993;DP=558;FS=4.055;HRun=1;HaplotypeScore=164.8491;InbreedingCoeff=0.4018;MQ=45.51;MQ0=10;MQRankSum=-4.128;QD=8.99;ReadPosRankSum=6.368;VQSLOD=1.4146;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:37:99:0,101,1258	1/1:7,1:8:17.63:128,18,0	0/0:18,1:8:8.68:0,9,149	0/0:32,0:12:1.78:0,2,139	1/1:29,0:29:45.13:356,45,0	0/1:19,0:19:69.26:100,0,69	0/1:13,3:16:95.67:112,0,96	0/0:40,0:36:28.99:0,29,897	1/1:16,0:16:33.27:166,33,0	0/1:15,0:15:5.57:132,0,6	1/1:12,0:12:16.56:157,17,0	1/1:7,0:7:2.14:75,2,0	0/1:18,0:18:3.18:151,0,3	1/1:9,1:10:4.49:98,4,0	1/1:12,0:12:16.54:153,17,0	1/1:20,1:21:51.01:297,51,0	1/1:24,1:25:18.77:243,19,0	1/1:14,0:13:10.39:67,10,0	0/0:28,0:25:47.97:0,48,734	0/0:33,0:31:84.78:0,85,960	0/1:7,0:7:16.80:17,0,82	0/1:20,0:19:6.79:176,0,7	1/1:17,0:17:11.54:117,12,0	1/1:8,0:8:5.90:66,6,0	0/0:27,0:27:81.25:0,81,1118	1/1:21,0:21:30.98:211,31,0	0/1:22,3:25:11.97:310,0,12	1/1:20,0:20:14.95:126,15,0
chr10	11932048	.	CA	C	7825.45	PASS	AB=0.907;AC=40;AF=0.714;AN=56;BaseQRankSum=3.581;DP=557;FS=13.478;HRun=5;HaplotypeScore=148.6506;InbreedingCoeff=0.5676;MQ=45.37;MQ0=10;MQRankSum=-3.429;QD=20.12;ReadPosRankSum=3.317;VQSLOD=3.3538;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:38:96.10:0,96,1228	1/1:2,6:8:18.05:200,18,0	0/0:19,2:8:8.68:0,9,115	0/1:28,2:11:40.29:40,0,62	1/1:4,25:29:75.10:822,75,0	0/0:19,0:20:2.15:0,2,185	0/1:16,0:16:27.72:28,0,164	0/1:36,5:37:50.18:50,0,787	1/1:0,15:15:36.10:406,36,0	1/1:1,14:15:5.53:404,6,0	1/1:3,9:12:23.97:328,24,0	1/1:2,5:7:18.05:199,18,0	1/1:5,13:18:19.55:372,20,0	1/1:2,7:9:21.06:237,21,0	1/1:2,10:12:33.09:370,33,0	1/1:2,19:21:54.07:608,54,0	1/1:9,16:25:48.48:591,48,0	1/1:4,11:13:23.55:237,24,0	0/0:28,1:26:25.40:0,25,646	0/0:30,3:31:36.98:0,37,752	0/1:6,2:8:23.42:58,0,23	1/1:3,16:18:50.36:550,50,0	1/1:3,13:16:38.36:398,38,0	1/1:2,6:8:7.35:184,7,0	0/0:27,0:27:78.26:0,78,1065	1/1:3,18:21:54.14:601,54,0	1/1:12,13:25:37.64:674,38,0	1/1:3,16:19:42.11:468,42,0
chr10	11932053	.	AC	A	2845.62	PASS	AB=0.968;AC=28;AF=0.500;AN=56;BaseQRankSum=7.085;DP=546;FS=6.094;HRun=1;HaplotypeScore=155.7694;InbreedingCoeff=0.2848;MQ=45.30;MQ0=9;MQRankSum=-5.200;QD=9.18;ReadPosRankSum=6.321;VQSLOD=1.3827;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:91.75:0,92,1214	0/1:8,1:9:2.35:99,0,2	0/0:18,1:6:5.56:0,6,93	0/0:24,3:8:1.40:0,1,94	1/1:29,0:29:11.71:344,12,0	0/0:20,0:20:30.36:0,30,190	0/0:15,0:15:2.95:0,3,41	0/0:36,1:33:15.98:0,16,909	0/1:20,0:20:50.38:120,0,50	0/1:15,0:15:5.22:128,0,5	0/1:13,1:14:11.53:162,0,12	0/1:7,0:7:4.73:77,0,5	0/1:18,1:19:16.32:159,0,16	0/1:9,0:9:1.33:87,0,1	1/1:12,0:12:11.34:177,11,0	1/1:21,1:22:28.98:267,29,0	1/1:26,0:26:0.13:261,0,0	1/1:14,0:12:18.88:81,19,0	0/0:25,0:22:50.90:0,51,746	0/0:32,1:31:76.93:0,77,973	0/1:8,1:9:23.24:23,0,101	1/1:17,0:17:23.71:208,24,0	0/1:17,0:17:2.53:107,0,3	1/1:7,0:7:13.79:77,14,0	0/0:27,0:27:81.21:0,81,1074	0/1:24,0:24:49.05:184,0,49	1/1:22,1:23:24.58:304,25,0	1/1:17,0:17:35.84:163,36,0
chr10	11932054	.	CAA	C	480.66	PASS	AB=0.798;AC=3;AF=0.054;AN=56;BaseQRankSum=2.081;DP=556;FS=1.778;HRun=5;HaplotypeScore=177.9931;InbreedingCoeff=-0.0599;MQ=45.22;MQ0=9;MQRankSum=-3.822;QD=7.28;ReadPosRankSum=0.246;VQSLOD=-0.5733;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:87.27:0,87,1519	0/0:9,0:9:21.02:0,21,226	0/0:19,0:6:8.96:0,9,126	0/1:24,2:8:18.19:18,0,154	0/0:30,0:30:79.18:0,79,725	0/1:12,5:22:99:198,0,407	0/1:9,8:17:62.54:364,0,63	0/0:37,0:34:69.97:0,70,1365	0/0:21,0:21:52.95:0,53,585	0/0:16,0:16:46.76:0,47,434	0/0:14,0:14:40.88:0,41,373	0/0:7,0:7:20.33:0,20,189	0/0:19,0:19:35.27:0,35,395	0/0:9,0:9:23.85:0,24,247	0/0:13,0:13:37.32:0,37,395	0/0:22,0:22:56.33:0,56,559	0/0:26,0:26:65.89:0,66,518	0/0:14,0:12:19.37:0,19,163	0/0:26,0:23:62.68:0,63,1021	0/0:30,0:31:87.12:0,87,1476	0/0:9,0:9:22.19:0,22,242	0/0:17,0:17:49.74:0,50,523	0/0:17,0:17:42.06:0,42,342	0/0:7,0:7:15.21:0,15,105	0/0:26,0:26:75.24:0,75,1306	0/0:25,0:25:68.73:0,69,749	0/0:24,0:24:60.76:0,61,589	0/0:17,0:17:41.46:0,41,362
chr10	11932076	.	A	AAAC	828.60	PASS	AB=0.919;AC=6;AF=0.107;AN=56;BaseQRankSum=5.084;DP=585;FS=0.000;HRun=0;HaplotypeScore=174.3365;InbreedingCoeff=-0.1220;MQ=50.79;MQ0=9;MQRankSum=-4.455;QD=6.96;ReadPosRankSum=1.904;VQSLOD=3.0018;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:93.31:0,93,1556	0/0:5,0:5:11.96:0,12,170	0/1:26,0:5:9.82:10,0,178	0/1:23,0:10:12.17:12,0,148	0/0:34,0:34:87.27:0,87,1386	0/1:11,9:20:99:731,0,163	0/1:12,1:13:31.56:149,0,32	0/0:38,0:37:76.93:0,77,924	0/0:22,0:22:57.17:0,57,942	0/0:23,0:22:59.20:0,59,885	0/0:20,0:20:60.05:0,60,915	0/0:13,0:13:36.11:0,36,546	0/0:19,0:19:32.86:0,33,647	0/0:9,0:9:27.06:0,27,430	0/0:19,0:19:48.10:0,48,752	0/0:26,0:26:66.07:0,66,1089	0/1:27,2:29:29.16:29,0,1074	0/0:12,0:11:23.63:0,24,408	0/0:23,0:20:50.79:0,51,517	0/0:39,0:38:82.34:0,82,885	0/0:5,0:4:6.02:0,6,78	0/0:19,0:19:53.92:0,54,849	0/0:19,0:19:51.55:0,52,814	0/1:7,0:7:18.62:19,0,259	0/0:26,0:26:69.71:0,70,1177	0/0:27,0:27:75.25:0,75,1239	0/0:21,0:21:60.12:0,60,950	0/0:16,0:16:42.14:0,42,715
chr10	11932081	.	CAA	C	224.58	PASS	AB=0.841;AC=3;AF=0.054;AN=56;BaseQRankSum=4.811;DP=587;FS=0.000;HRun=9;HaplotypeScore=157.5663;InbreedingCoeff=-0.0633;MQ=56.53;MQ0=9;MQRankSum=-5.480;QD=3.40;ReadPosRankSum=-1.852;VQSLOD=-0.1688;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:34:93.28:0,93,1435	0/0:5,0:5:12.04:0,12,193	0/0:30,0:9:19.11:0,19,169	0/0:27,0:12:21.29:0,21,241	0/0:34,0:34:87.12:0,87,1263	0/1:14,4:18:99:181,0,103	0/1:7,5:12:75.29:115,0,75	0/1:36,0:35:27.60:28,0,185	0/0:22,0:23:60.20:0,60,958	0/0:26,0:25:72.16:0,72,1135	0/0:19,0:19:51.17:0,51,810	0/0:13,0:13:39.12:0,39,590	0/0:19,0:19:45.07:0,45,688	0/0:9,0:9:27.09:0,27,440	0/0:16,0:16:45.15:0,45,736	0/0:25,0:25:63.11:0,63,953	0/0:29,0:29:76.01:0,76,1153	0/0:12,0:11:24.08:0,24,393	0/0:22,0:20:14:0,14,242	0/0:35,0:35:42.12:0,42,503	0/0:4,0:3:5.99:0,6,48	0/0:20,0:20:54.09:0,54,778	0/0:19,0:20:51.15:0,51,807	0/0:8,0:8:19.01:0,19,313	0/0:25,0:25:57.66:0,58,1045	0/0:27,0:27:75.20:0,75,1197	0/0:20,0:20:51.55:0,52,754	0/0:16,0:16:39.13:0,39,639
chr10	11932084	.	A	AAAC	3880.05	PASS	AB=0.800;AC=10;AF=0.179;AN=56;BaseQRankSum=3.412;DP=592;FS=3.046;HRun=0;HaplotypeScore=156.5722;InbreedingCoeff=0.7203;MQ=59.82;MQ0=10;MQRankSum=-6.378;QD=30.31;ReadPosRankSum=0.730;VQSLOD=4.0092;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:96.03:0,96,1488	0/0:5,0:5:12.04:0,12,197	0/0:34,0:11:23.94:0,24,250	0/0:29,0:14:25.70:0,26,279	0/0:32,0:32:90.09:0,90,1352	0/1:9,0:18:90.95:319,0,91	0/1:13,0:14:58.67:59,0,81	1/1:31,3:33:58.55:898,59,0	0/0:23,0:23:59.94:0,60,968	0/0:27,0:26:74.83:0,75,1189	0/0:18,0:18:54.17:0,54,866	0/0:13,0:13:38.87:0,39,592	0/0:19,0:19:48.15:0,48,754	0/0:10,0:10:30.09:0,30,473	0/0:17,0:17:48.15:0,48,780	0/0:26,0:26:63.03:0,63,991	0/0:30,0:30:61.85:0,62,1206	0/0:13,0:12:23.63:0,24,402	1/1:11,11:21:43.56:840,44,0	1/1:16,19:34:92.63:1637,93,0	1/1:1,3:3:6.02:128,6,0	0/0:19,0:19:54.09:0,54,807	0/0:20,0:20:56.75:0,57,856	0/0:8,0:8:24.06:0,24,354	0/0:24,0:24:66.50:0,66,1107	0/0:27,0:27:77.99:0,78,1247	0/0:20,0:20:54.94:0,55,795	0/0:16,0:16:39.13:0,39,655
chr10	11932085	.	A	AAC	1483.12	PASS	AB=0.921;AC=7;AF=0.125;AN=56;BaseQRankSum=3.228;DP=596;FS=0.000;HRun=0;HaplotypeScore=153.6793;InbreedingCoeff=0.7012;MQ=62.44;MQ0=10;MQRankSum=-4.774;QD=15.29;ReadPosRankSum=0.246;VQSLOD=3.5988;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:95.77:0,96,1347	0/0:5,0:5:12.04:0,12,179	0/0:35,0:12:23.14:0,23,220	0/0:31,0:16:29.93:0,30,290	0/0:31,0:31:90.09:0,90,1229	0/0:18,0:18:17.81:0,18,182	0/0:15,0:15:17.42:0,17,215	0/1:32,3:34:20.92:478,0,21	0/0:24,0:24:59.69:0,60,869	0/0:27,0:26:74.83:0,75,1079	0/0:18,0:18:54.18:0,54,796	0/0:13,0:13:38.62:0,39,552	0/0:19,0:19:48.15:0,48,688	0/0:10,0:10:30.09:0,30,433	0/0:17,0:17:48.15:0,48,707	0/0:25,0:25:66.11:0,66,941	0/0:28,0:30:68.11:0,68,1107	0/0:13,0:12:27.07:0,27,386	1/1:24,0:22:1.45:359,1,0	1/1:32,2:33:58.62:719,59,0	1/1:4,0:3:6.01:57,6,0	0/0:18,0:18:54.09:0,54,746	0/0:20,0:20:56.41:0,56,776	0/0:8,0:8:24.06:0,24,325	0/0:24,0:24:69.69:0,70,1008	0/0:29,0:29:77.74:0,78,1124	0/0:20,0:20:57.02:0,57,742	0/0:16,0:16:39.13:0,39,589
chr10	11932088	.	AAAC	A	1424.51	PASS	AB=0.847;AC=6;AF=0.107;AN=56;BaseQRankSum=-0.089;DP=603;FS=5.604;HRun=0;HaplotypeScore=160.7957;InbreedingCoeff=0.5944;MQ=64.36;MQ0=9;MQRankSum=-1.687;QD=14.69;ReadPosRankSum=-3.559;VQSLOD=2.1866;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:96.26:0,96,1780	0/0:5,0:5:12.04:0,12,221	0/0:38,0:15:33.70:0,34,389	0/0:29,0:16:13.22:0,13,371	0/0:33,0:33:86.93:0,87,1492	0/0:17,0:17:43.05:0,43,442	0/0:16,0:16:33.67:0,34,285	1/1:25,9:34:26.16:637,26,0	0/0:25,0:25:66.19:0,66,1212	0/0:27,0:26:75.12:0,75,1425	0/0:18,0:18:54.10:0,54,982	0/0:14,0:14:41.99:0,42,689	0/0:20,0:20:51.08:0,51,890	0/0:11,0:11:33.09:0,33,597	0/0:18,0:18:54.16:0,54,982	0/0:25,0:25:57.85:0,58,1077	0/0:30,0:30:69.11:0,69,1472	0/0:13,0:12:27.03:0,27,491	0/1:20,3:21:13.61:396,0,14	0/1:26,8:33:78.54:449,0,79	1/1:6,0:5:8.98:73,9,0	0/0:19,0:19:57.09:0,57,954	0/0:21,0:21:59.94:0,60,1050	0/0:8,0:8:23.75:0,24,409	0/0:23,0:23:66.18:0,66,1258	0/0:28,0:28:84.26:0,84,1528	0/0:19,0:19:31.98:0,32,813	0/0:15,0:15:39.13:0,39,778
chr10	11933085	.	TG	T	1515.01	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.659;DP=656;FS=10.087;HRun=1;HaplotypeScore=65.8072;InbreedingCoeff=0.9973;MQ=81.98;MQ0=0;MQRankSum=-3.302;QD=36.95;ReadPosRankSum=0.144;VQSLOD=3.2451;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,105,1625	0/0:9,0:9:27.09:0,27,428	0/0:18,0:18:51.15:0,51,789	0/0:18,0:18:50.65:0,51,737	0/0:37,0:37:99:0,108,1726	1/1:0,28:28:78.26:1091,78,0	1/1:0,13:13:39.13:546,39,0	0/0:35,0:35:99:0,105,1632	0/0:19,0:19:57.18:0,57,887	0/0:25,0:25:75.26:0,75,1200	0/0:23,0:23:69.24:0,69,1103	0/0:25,0:25:75.26:0,75,1199	0/0:26,0:26:78.27:0,78,1243	0/0:28,0:28:84.29:0,84,1343	0/0:27,0:27:81.28:0,81,1295	0/0:20,0:20:60.20:0,60,959	0/0:36,0:35:99:0,105,1679	0/0:21,0:21:57.19:0,57,911	0/0:23,0:23:69.24:0,69,1098	0/0:18,0:18:54.18:0,54,861	0/0:24,0:24:69.24:0,69,1100	0/0:24,0:24:72.25:0,72,1151	0/0:13,0:13:39.13:0,39,618	0/0:37,0:37:99:0,108,1720	0/0:13,0:13:39.13:0,39,624	0/0:23,0:23:69.24:0,69,1104	0/0:31,0:31:93.32:0,93,1487	0/0:7,0:7:21.07:0,21,336
chr10	11934552	.	AGG	A	2220.84	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=10.562;DP=810;FS=5.094;HRun=3;HaplotypeScore=96.9555;InbreedingCoeff=0.9993;MQ=86.08;MQ0=0;MQRankSum=-1.128;QD=41.13;ReadPosRankSum=-2.476;VQSLOD=2.4802;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,129,2418	0/0:11,0:11:33.10:0,33,589	0/0:25,0:25:75.26:0,75,1413	0/0:28,0:28:81.26:0,81,1457	0/0:32,0:32:90.28:0,90,1647	1/1:0,25:25:72.24:1102,72,0	1/1:0,29:29:81.28:1240,81,0	0/0:38,0:38:99:0,105,1920	0/0:24,0:24:72.25:0,72,1391	0/0:32,0:32:93.30:0,93,1727	0/0:11,0:11:30.10:0,30,574	0/0:52,0:52:99:0,154,2885	0/0:28,0:28:81.21:0,81,1441	0/0:32,0:32:93.28:0,93,1690	0/0:44,0:44:99:0,129,2443	0/0:26,0:26:78.26:0,78,1466	0/0:34,0:34:99:0,99,1903	0/0:18,0:18:54.17:0,54,1010	0/0:15,0:15:45.15:0,45,829	0/0:36,0:36:99:0,108,2030	0/0:43,0:43:99:0,129,2427	0/0:18,0:18:51.17:0,51,981	0/0:18,0:18:54.19:0,54,1043	0/0:39,0:38:99:0,114,2192	0/0:28,0:28:84.26:0,84,1528	0/0:43,0:43:99:0,129,2484	0/0:28,0:28:81.28:0,81,1565	0/0:10,0:10:30.09:0,30,545
chr10	11937209	.	T	TACAC	1942.90	PASS	AB=1.000;AC=33;AF=0.717;AN=46;BaseQRankSum=-2.759;DP=345;FS=3.206;HRun=0;HaplotypeScore=130.0980;InbreedingCoeff=0.5526;MQ=53.42;MQ0=11;MQRankSum=0.270;QD=9.67;ReadPosRankSum=0.061;VQSLOD=3.1788;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:15:3.01:0,3,47	1/1:5,0:7:5.75:50,6,0	./.	./.	1/1:13,0:13:9.01:132,9,0	./.	0/1:15,0:12:0:0,0,0	0/0:20,0:18:4.97:0,5,33	1/1:5,2:8:3.01:70,3,0	1/1:15,0:15:6.87:59,7,0	1/1:11,1:13:14.74:178,15,0	1/1:10,2:14:8.77:154,9,0	1/1:6,0:7:3.01:69,3,0	1/1:7,3:11:2.58:70,3,0	1/1:9,4:14:5.75:83,6,0	1/1:9,3:11:6.02:141,6,0	1/1:6,0:11:11.24:107,11,0	1/1:5,4:11:17.80:349,18,0	0/0:12,0:12:3:0,3,28	0/0:7,0:14:18.02:0,18,168	0/0:10,0:16:5.80:0,6,56	./.	./.	1/1:6,10:16:14.94:341,15,0	0/0:19,0:19:9.03:0,9,128	1/1:9,4:12:6.02:141,6,0	1/1:6,3:9:4.26:58,4,0	1/1:6,1:8:5.75:83,6,0
chr10	11937749	.	TAAG	T	1966.18	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.286;DP=746;FS=0.580;HRun=0;HaplotypeScore=130.7104;InbreedingCoeff=0.9997;MQ=83.10;MQ0=0;MQRankSum=-1.989;QD=38.55;ReadPosRankSum=1.497;VQSLOD=4.7153;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,99,2243	0/0:10,0:10:30.10:0,30,680	0/0:22,0:22:63.12:0,63,1392	0/0:20,0:20:53.06:0,53,1075	0/0:41,0:41:99:0,117,2636	1/1:2,21:23:54.14:870,54,0	1/1:1,27:28:75.21:1218,75,0	0/0:45,0:45:99:0,129,2904	0/0:28,0:28:78.27:0,78,1751	0/0:38,0:38:99:0,111,2457	0/0:18,0:18:54.19:0,54,1224	0/0:20,0:20:57.20:0,57,1276	0/0:28,0:28:81.28:0,81,1832	0/0:25,0:25:72.25:0,72,1630	0/0:21,0:21:63.20:0,63,1352	0/0:33,0:33:96.33:0,96,2161	0/0:29,0:29:78.27:0,78,1766	0/0:20,0:21:63.16:0,63,1378	0/0:17,0:17:45.15:0,45,1021	0/0:28,0:28:84.29:0,84,1900	0/0:34,0:34:96.33:0,96,2148	0/0:23,0:23:66.23:0,66,1496	0/0:20,0:20:57.20:0,57,1292	0/0:21,0:21:57.20:0,57,1292	0/0:27,0:27:81.28:0,81,1807	0/0:33,0:33:96.31:0,96,2133	0/0:41,0:41:99:0,117,2649	0/0:17,0:17:51.18:0,51,1156
chr10	11940396	.	C	CGT	1009.48	PASS	AB=0.679;AC=2;AF=0.036;AN=56;BaseQRankSum=-1.125;DP=909;FS=10.124;HRun=0;HaplotypeScore=122.7256;InbreedingCoeff=-0.0364;MQ=64.63;MQ0=6;MQRankSum=2.614;QD=18.69;ReadPosRankSum=-2.288;VQSLOD=3.1520;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:46:87.63:0,88,1010	0/0:14,0:15:29.92:0,30,336	0/0:38,0:20:18:0,18,220	0/0:38,0:27:27.65:0,28,281	0/0:25,0:25:57.17:0,57,676	0/1:9,9:22:28.82:218,0,29	0/1:19,13:32:95.54:880,0,96	0/0:34,0:34:65.96:0,66,733	0/0:34,0:36:68.77:0,69,779	0/0:33,0:34:64.09:0,64,915	0/0:13,0:14:32.93:0,33,372	0/0:38,0:38:93.25:0,93,1076	0/0:33,0:35:71.98:0,72,806	0/0:33,0:35:89.92:0,90,1017	0/0:52,0:52:99:0,111,1301	0/0:41,0:40:84.25:0,84,1001	0/0:46,0:47:99:0,111,1300	0/0:28,0:31:24.57:0,25,478	0/0:14,0:15:20.87:0,21,216	0/0:19,0:19:35.90:0,36,407	0/0:64,0:65:99:0,125,1391	0/0:16,0:16:42.11:0,42,479	0/0:18,0:18:27.01:0,27,304	0/0:50,0:49:68.89:0,69,1232	0/0:27,0:30:71.88:0,72,810	0/0:29,0:29:36.82:0,37,582	0/0:26,0:27:53.99:0,54,622	0/0:25,0:25:48.15:0,48,572
chr10	11940510	.	TTG	T	10770.79	PASS	AB=0.964;AC=47;AF=0.839;AN=56;BaseQRankSum=5.294;DP=987;FS=5.011;HRun=0;HaplotypeScore=155.6598;InbreedingCoeff=0.6015;MQ=57.42;MQ0=7;MQRankSum=1.288;QD=12.25;ReadPosRankSum=3.970;VQSLOD=4.6813;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,1:38:20.64:0,21,883	1/1:5,9:13:18.05:207,18,0	0/0:43,0:22:11.70:0,12,123	0/1:41,0:23:2.89:3,0,177	1/1:15,14:29:35.98:370,36,0	0/0:25,0:26:48.15:0,48,720	0/1:23,1:24:25.27:25,0,495	1/1:15,0:26:21.07:96,21,0	1/1:11,28:38:28.55:761,29,0	1/1:18,21:39:65.18:674,65,0	1/1:10,16:24:41.95:462,42,0	1/1:19,26:46:77.24:818,77,0	1/1:28,29:56:71.90:787,72,0	1/1:20,21:40:50.98:566,51,0	1/1:20,34:56:41.71:997,42,0	1/1:23,38:60:72.20:828,72,0	1/1:9,20:30:44.77:476,45,0	1/1:8,19:27:7.43:445,7,0	1/1:22,0:27:7.53:97,8,0	1/1:20,0:26:25.08:119,25,0	1/1:26,0:44:42.31:256,42,0	1/1:13,19:29:36.06:396,36,0	1/1:14,16:30:35.79:367,36,0	1/1:14,30:45:80.27:883,80,0	0/1:25,2:27:29.86:30,0,450	1/1:18,19:38:38.03:623,38,0	1/1:16,21:35:35.84:413,36,0	1/1:3,3:6:7.57:73,8,0
chr10	11940623	.	T	TTG	4536.19	PASS	AB=0.766;AC=11;AF=0.196;AN=56;BaseQRankSum=-9.705;DP=1039;FS=2.286;HRun=0;HaplotypeScore=141.5618;InbreedingCoeff=0.8823;MQ=52.45;MQ0=12;MQRankSum=0.696;QD=20.71;ReadPosRankSum=0.437;VQSLOD=5.4048;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:93.26:0,93,1079	0/0:15,0:15:33.07:0,33,375	0/0:48,0:27:32.95:0,33,416	0/0:34,0:21:29.70:0,30,294	0/0:36,0:36:71.13:0,71,790	1/1:11,18:29:14.54:702,15,0	1/1:13,15:29:28.02:603,28,0	1/1:22,13:33:39.11:541,39,0	0/0:41,0:43:92.95:0,93,1057	0/0:44,0:44:75.21:0,75,871	0/0:26,0:26:44.91:0,45,503	0/0:40,0:42:86.90:0,87,973	0/0:43,0:43:86.72:0,87,989	0/0:42,0:44:83.83:0,84,918	0/0:61,0:60:99:0,114,1230	0/0:50,0:50:99:0,123,1370	0/0:33,0:32:62.89:0,63,698	0/0:22,0:22:60.16:0,60,697	1/1:16,10:23:33.11:520,33,0	1/1:20,19:40:68.95:1141,69,0	0/1:41,17:57:40.54:1030,0,41	0/0:39,0:41:71.89:0,72,816	0/0:31,0:32:72.03:0,72,809	0/0:44,0:43:71.65:0,72,1042	0/0:28,0:28:60.05:0,60,652	0/0:35,0:36:75.04:0,75,853	0/0:33,0:33:69.19:0,69,803	0/0:11,0:12:35.93:0,36,394
chr10	11940697	.	TTG	T	458.25	PASS	AB=0.913;AC=5;AF=0.089;AN=56;BaseQRankSum=3.779;DP=970;FS=0.803;HRun=0;HaplotypeScore=146.7126;InbreedingCoeff=0.7733;MQ=49.38;MQ0=16;MQRankSum=0.913;QD=8.65;ReadPosRankSum=1.691;VQSLOD=3.4990;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,110,1705	0/0:7,0:7:18.06:0,18,293	0/0:49,1:22:51.16:0,51,756	0/0:77,1:39:58.61:0,59,800	0/0:23,0:23:39.13:0,39,626	1/1:7,11:17:29.92:346,30,0	1/1:8,5:13:18.04:208,18,0	0/0:48,0:45:84.25:0,84,1315	0/0:31,0:31:66.22:0,66,1065	0/0:31,0:31:77.25:0,77,1107	0/0:27,0:25:42.14:0,42,655	0/0:38,0:38:90.31:0,90,1457	0/0:49,0:49:99:0,108,1648	0/0:45,1:46:68.47:0,68,1609	0/0:43,0:42:90.31:0,90,1453	0/0:59,0:59:99:0,144,2300	0/0:28,0:28:69.23:0,69,1097	0/1:19,2:20:31.72:32,0,535	0/0:34,0:33:69.23:0,69,1096	0/0:22,0:22:48.15:0,48,748	0/0:62,2:62:85.43:0,85,2002	0/0:30,0:29:72.24:0,72,1114	0/0:20,0:20:42.14:0,42,648	0/0:42,0:42:62.50:0,62,1453	0/0:23,0:23:45.13:0,45,707	0/0:34,0:34:52.11:0,52,980	0/0:29,0:29:66.23:0,66,1070	0/0:11,0:11:33.11:0,33,538
chr10	11940730	.	TTG	T	2226.73	PASS	AB=0.864;AC=18;AF=0.346;AN=52;BaseQRankSum=6.640;DP=1023;FS=1.692;HRun=0;HaplotypeScore=143.9242;InbreedingCoeff=0.1863;MQ=44.88;MQ0=103;MQRankSum=-2.450;QD=4.57;ReadPosRankSum=-1.112;VQSLOD=3.1326;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:54,1:51:4.58:0,5,920	0/1:10,0:10:8.05:8,0,17	./.	./.	0/0:14,0:14:6.02:0,6,94	1/1:14,5:14:8.99:90,9,0	1/1:5,7:10:6.02:70,6,0	1/1:28,25:38:42.11:474,42,0	0/1:47,2:44:17.78:18,0,785	0/1:31,3:37:99:102,0,670	0/0:23,1:24:3.80:0,4,189	0/0:38,0:32:54.16:0,54,813	0/0:37,1:35:4.31:0,4,525	0/0:44,0:41:51.01:0,51,671	0/0:60,0:52:63.95:0,64,1072	0/1:66,2:61:11.50:11,0,961	0/0:32,0:33:46.05:0,46,852	0/1:26,2:28:46.92:47,0,500	1/1:18,11:22:33.04:356,33,0	1/1:9,29:35:60.10:677,60,0	0/1:40,33:64:36.23:499,0,36	0/0:36,1:29:1.60:0,2,480	0/0:25,0:24:24.99:0,25,502	0/1:40,2:38:12.62:13,0,661	0/1:13,2:15:30.92:31,0,147	0/0:35,0:28:2.18:0,2,600	0/0:32,0:31:28.08:0,28,542	0/0:10,0:10:15.05:0,15,234
chr10	11940826	.	T	TGG	142.93	PASS	AB=0.926;AC=7;AF=0.135;AN=52;BaseQRankSum=2.858;DP=735;FS=14.377;HRun=0;HaplotypeScore=83.6583;InbreedingCoeff=-0.0046;MQ=25.14;MQ0=269;MQRankSum=-3.285;QD=1.31;ReadPosRankSum=1.842;VQSLOD=0.1889;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:18:26.99:0,27,367	0/0:12,0:8:9.02:0,9,142	./.	0/0:40,0:3:9:0,9,118	0/1:23,1:17:42.69:50,0,43	0/0:29,0:24:36.03:0,36,485	0/0:33,0:23:51.04:0,51,735	0/0:36,1:16:42.09:0,42,633	0/0:23,0:14:6:0,6,73	0/0:30,0:9:15.69:0,16,334	0/0:15,1:12:6.01:0,6,70	0/0:32,0:19:15.03:0,15,171	0/0:24,0:17:12.02:0,12,169	0/0:32,0:19:23.84:0,24,305	0/0:40,2:25:25.74:0,26,355	0/0:40,1:30:24.01:0,24,300	1/1:16,0:5:2.94:18,3,0	0/1:20,0:10:17.74:18,0,86	0/0:13,0:3:9.03:0,9,147	0/1:17,1:11:44.90:45,0,78	0/0:32,0:10:6.02:0,6,96	0/1:12,3:5:27.66:50,0,28	0/0:14,0:7:9.02:0,9,123	0/0:34,0:10:12.02:0,12,151	0/1:13,2:10:85.08:85,0,260	0/0:43,1:22:1.84:0,2,799	0/0:12,0:7:9.03:0,9,146	./.
chr10	11940841	.	TTGTGTGTGTGTG	T	4329.15	PASS	AB=0.712;AC=18;AF=0.346;AN=52;BaseQRankSum=3.053;DP=684;FS=32.134;HRun=0;HaplotypeScore=106.9747;InbreedingCoeff=0.2809;MQ=27.39;MQ0=220;MQRankSum=-3.431;QD=13.49;ReadPosRankSum=4.164;VQSLOD=1.3016;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:21:33.11:0,33,1533	1/1:5,8:10:6.01:189,6,0	0/0:39,0:1:3.01:0,3,178	0/0:44,0:4:12.04:0,12,525	0/1:12,13:20:84.04:127,0,84	0/0:19,0:32:42.14:0,42,1923	0/0:18,0:28:54.19:0,54,2390	0/0:31,0:14:14.57:0,15,296	1/1:9,10:11:3.01:106,3,0	0/1:18,13:15:67.74:407,0,68	1/1:3,14:13:3.01:106,3,0	1/1:14,12:15:9.03:317,9,0	0/1:14,10:16:78.61:202,0,79	1/1:13,19:20:30.10:872,30,0	0/1:29,5:22:5.52:386,0,6	0/1:15,28:34:99:405,0,116	0/0:12,0:3:3.01:0,3,36	0/0:13,0:6:6.02:0,6,112	0/0:20,0:5:9.03:0,9,196	0/0:18,0:13:24:0,24,615	0/0:25,0:9:5.92:0,6,109	0/0:12,0:5:3.01:0,3,91	0/0:11,0:6:3.01:0,3,48	0/1:14,7:8:99:180,0,148	0/0:19,0:14:36.12:0,36,1750	1/1:15,17:19:39.35:1032,39,0	./.	./.
chr10	11940941	.	T	TGG	900.17	PASS	AB=0.920;AC=13;AF=0.260;AN=50;BaseQRankSum=6.659;DP=842;FS=28.121;HRun=0;HaplotypeScore=105.1119;InbreedingCoeff=-0.1445;MQ=26.96;MQ0=301;MQRankSum=-6.528;QD=2.54;ReadPosRankSum=-1.214;VQSLOD=0.5000;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,2:13:24.08:0,24,385	0/0:19,1:16:15.01:0,15,232	./.	./.	0/0:32,1:19:24.08:0,24,373	1/1:13,0:6:17.25:216,17,0	0/1:22,0:11:99:112,0,291	./.	0/0:28,4:15:24.04:0,24,360	0/1:24,1:18:4.93:5,0,660	0/1:23,6:26:99:239,0,353	0/0:32,0:9:24.55:0,25,369	0/1:28,1:17:25.45:25,0,391	0/0:38,0:22:42.50:0,42,678	0/0:38,0:20:20.86:0,21,341	0/0:39,0:26:48.16:0,48,771	0/1:30,3:15:17.48:17,0,529	0/1:23,2:15:13.18:13,0,494	0/0:5,0:1:3:0,3,28	0/1:30,4:18:99:199,0,431	0/0:50,1:22:48.16:0,48,760	0/1:48,10:34:93.50:93,0,784	0/1:46,2:34:78.99:79,0,571	0/0:32,2:13:15.05:0,15,244	0/1:29,1:22:7.08:7,0,312	0/0:28,2:15:28.15:0,28,617	0/0:23,0:16:18.06:0,18,292	0/1:7,1:7:41.53:42,0,162
chr10	11940956	.	TTG	T	1082.68	PASS	AB=0.907;AC=19;AF=0.380;AN=50;BaseQRankSum=6.437;DP=775;FS=10.130;HRun=0;HaplotypeScore=95.6954;InbreedingCoeff=0.0454;MQ=27.80;MQ0=272;MQRankSum=-1.963;QD=2.52;ReadPosRankSum=3.645;VQSLOD=1.1501;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:25,2:13:13.76:14,0,248	0/0:19,0:14:11.78:0,12,187	./.	./.	0/0:33,0:21:24.08:0,24,373	0/1:12,0:6:18.44:21,0,18	1/1:12,4:9:14.71:132,15,0	./.	0/0:24,1:15:24.08:0,24,373	0/0:22,0:18:18.96:0,19,429	0/1:31,1:26:10.76:11,0,280	0/0:32,0:10:24.08:0,24,374	0/0:26,0:16:27.56:0,28,388	0/1:26,0:17:31.71:32,0,317	0/1:28,0:18:9.73:10,0,171	0/1:30,2:22:35.67:36,0,550	0/0:23,2:14:1.28:0,1,468	0/1:16,3:15:99:99,0,248	1/1:5,2:1:3.01:35,3,0	1/1:22,11:16:21.28:293,21,0	1/1:24,27:23:47.80:508,48,0	0/1:40,0:30:1.83:2,0,600	0/1:39,1:31:11.10:11,0,459	0/1:30,1:13:36.38:36,0,125	0/0:32,2:26:27.02:0,27,387	0/0:35,0:17:40.38:0,40,611	0/0:20,0:16:3.90:0,4,185	0/1:5,0:5:2.11:2,0,128
chr10	11941634	.	T	TTG	1590.38	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-6.185;DP=917;FS=6.203;HRun=0;HaplotypeScore=111.8231;InbreedingCoeff=0.9570;MQ=56.59;MQ0=11;MQRankSum=1.030;QD=30.58;ReadPosRankSum=-1.012;VQSLOD=4.7294;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:54:99:0,138,1699	0/0:11,0:11:24.08:0,24,295	0/0:43,0:21:24.07:0,24,292	0/0:34,0:22:33.01:0,33,362	0/0:26,0:27:63.03:0,63,752	1/1:3,17:18:51.17:832,51,0	1/1:7,24:31:23.26:880,23,0	0/0:41,0:37:67.51:0,68,834	0/0:35,0:34:78.22:0,78,937	0/0:21,0:21:42.13:0,42,517	0/0:21,0:21:51.15:0,51,617	0/0:39,0:39:87.27:0,87,1071	0/0:28,0:28:75.24:0,75,923	0/0:33,0:32:75.21:0,75,899	0/0:42,0:42:99:0,102,1233	0/0:42,0:41:99:0,99,1195	0/0:38,0:38:93.29:0,93,1144	0/0:40,1:39:7.56:0,8,1084	0/0:30,0:27:47.97:0,48,556	0/0:30,0:32:77.86:0,78,894	0/0:59,0:62:99:0,138,1593	0/0:22,0:22:50.91:0,51,571	0/0:13,0:13:27.08:0,27,332	0/0:52,0:51:99:0,114,1403	0/0:21,0:20:45.14:0,45,554	0/0:33,0:32:75.23:0,75,913	0/0:34,0:33:90.28:0,90,1108	0/0:10,0:10:30.09:0,30,369
chr10	11942010	.	T	TAAAC	1420.19	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=0.646;DP=425;FS=0.000;HRun=0;HaplotypeScore=85.4541;InbreedingCoeff=0.9407;MQ=86.53;MQ0=1;MQRankSum=-3.745;QD=52.60;ReadPosRankSum=-2.351;VQSLOD=3.9744;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:48.10:0,48,770	0/0:12,0:12:36.10:0,36,582	0/0:25,0:23:44.58:0,45,650	0/0:12,0:11:26.84:0,27,197	0/0:14,0:14:36.04:0,36,570	1/1:8,8:16:38.79:843,39,0	1/1:6,5:11:33.09:698,33,0	0/0:29,0:29:63.13:0,63,994	0/0:18,0:18:48.13:0,48,795	0/0:12,0:12:26.86:0,27,414	0/0:8,0:8:21.04:0,21,322	0/0:10,0:10:24.01:0,24,385	0/0:12,0:12:30.06:0,30,497	0/0:17,0:17:32.80:0,33,551	0/0:17,0:17:45.13:0,45,751	0/0:24,0:24:69.21:0,69,1182	0/0:21,0:20:57.02:0,57,871	0/0:13,0:13:39.10:0,39,675	0/0:12,0:12:36.06:0,36,476	0/0:12,0:12:24.54:0,25,401	0/0:9,0:9:21.07:0,21,375	0/0:12,0:12:33.10:0,33,554	0/0:17,0:17:43:0,43,698	0/0:16,0:16:36.07:0,36,552	0/0:15,0:15:31.44:0,31,470	0/0:22,0:22:54.16:0,54,895	0/0:17,0:15:39.13:0,39,698	0/0:2,0:2:6.02:0,6,109
chr10	11942023	.	T	TA	616.77	PASS	AB=0.823;AC=12;AF=0.214;AN=56;BaseQRankSum=1.536;DP=525;FS=3.706;HRun=15;HaplotypeScore=95.0946;InbreedingCoeff=0.1335;MQ=77.18;MQ0=3;MQRankSum=-3.155;QD=3.30;ReadPosRankSum=-3.221;VQSLOD=0.1350;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,2:28:5.90:0,6,142	0/0:11,0:12:25.15:0,25,141	0/0:28,0:21:10.62:0,11,66	0/0:16,0:13:4.28:0,4,34	0/0:14,0:15:8.57:0,9,54	1/1:11,6:18:29.75:229,30,0	0/1:9,6:15:6.02:64,0,6	0/1:22,9:30:18.56:165,0,19	0/0:26,0:27:17.86:0,18,199	0/0:12,0:12:19.11:0,19,113	0/1:11,0:13:2.69:3,0,72	0/1:14,4:18:7.86:8,0,70	0/0:9,0:11:2.75:0,3,68	0/0:18,1:21:2.55:0,3,108	0/0:20,0:21:21.58:0,22,130	0/1:26,3:29:31.65:32,0,171	0/0:25,0:26:39:0,39,227	0/0:13,0:13:26.41:0,26,162	0/1:10,3:15:14.48:84,0,14	1/1:7,9:17:17.75:127,18,0	0/1:6,6:12:21.11:52,0,21	0/0:15,0:16:24.51:0,25,143	0/0:18,0:18:31.31:0,31,185	0/1:15,1:19:2.85:3,0,91	0/0:15,0:16:10.49:0,10,146	0/0:24,0:26:26.38:0,26,151	0/0:28,0:26:9.32:0,9,156	0/0:2,0:2:5.69:0,6,30
chr10	11942358	.	AACACACACACACACAC	A	572.50	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=4.376;DP=521;FS=1.455;HRun=0;HaplotypeScore=181.6230;InbreedingCoeff=0.5528;MQ=58.16;MQ0=37;MQRankSum=-4.209;QD=14.68;ReadPosRankSum=0.276;VQSLOD=2.4965;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:23:8.52:0,9,145	0/0:5,0:5:6.02:0,6,358	0/0:54,0:24:2.97:0,3,20	0/0:56,0:23:3.01:0,3,56	0/0:19,0:18:27.09:0,27,1713	1/1:6,11:17:19.62:603,20,0	1/1:10,12:19:2.53:75,3,0	0/0:18,0:16:33.04:0,33,752	0/0:18,0:17:30.10:0,30,1481	0/0:14,0:14:30.08:0,30,921	0/0:13,0:13:15.03:0,15,628	0/0:13,0:15:33.11:0,33,2020	0/0:9,0:11:5.90:0,6,261	0/0:5,0:8:12.04:0,12,386	0/0:13,0:11:15.02:0,15,750	0/0:16,0:17:36.12:0,36,2071	0/0:24,0:25:48.15:0,48,2995	0/0:21,0:20:45.14:0,45,2066	0/0:7,0:7:9.03:0,9,495	0/0:15,0:15:21.07:0,21,1026	0/0:28,0:24:36.12:0,36,1881	0/0:10,0:10:21.07:0,21,1059	0/0:14,0:16:26.83:0,27,1455	0/0:26,0:25:45.12:0,45,2482	0/0:7,0:7:3.01:0,3,49	0/0:19,0:20:26.56:0,27,748	0/0:10,0:9:12.04:0,12,552	0/0:10,0:11:27.09:0,27,1529
chr10	11945575	.	CTGTA	C	6157.60	PASS	AB=0.965;AC=37;AF=0.740;AN=50;BaseQRankSum=11.605;DP=651;FS=0.000;HRun=0;HaplotypeScore=116.9898;InbreedingCoeff=0.7139;MQ=64.39;MQ0=2;MQRankSum=-0.339;QD=13.59;ReadPosRankSum=-0.893;VQSLOD=4.2451;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:51.15:0,51,1056	1/1:4,3:7:6:93,6,0	./.	./.	1/1:11,7:18:15.05:220,15,0	0/0:26,0:26:42.13:0,42,914	0/1:19,1:20:25.25:25,0,296	0/1:35,0:35:0:0,0,0	1/1:7,15:22:27.09:417,27,0	1/1:18,15:33:51.08:695,51,0	1/1:12,22:34:54.18:823,54,0	1/1:7,12:19:33.11:509,33,0	0/0:24,0:24:45.07:0,45,949	0/0:21,0:21:33.11:0,33,759	1/1:9,12:21:27.09:417,27,0	1/1:11,12:23:24.08:370,24,0	1/1:18,13:31:33.11:509,33,0	1/1:12,14:26:27.09:417,27,0	1/1:21,0:30:15.02:140,15,0	1/1:12,0:27:18.02:168,18,0	./.	1/1:7,4:11:12.04:185,12,0	1/1:10,6:16:15.05:232,15,0	0/1:15,1:15:22.21:22,0,468	0/0:29,0:29:57.20:0,57,1305	1/1:18,10:28:30.07:418,30,0	1/1:15,11:25:24.08:360,24,0	1/1:6,4:10:9.03:139,9,0
chr10	11945808	.	CTTTTCTTTTCTT	C	2159.38	PASS	AB=0.993;AC=26;AF=0.464;AN=56;BaseQRankSum=2.319;DP=483;FS=1.978;HRun=0;HaplotypeScore=124.7577;InbreedingCoeff=-0.0069;MQ=50.77;MQ0=27;MQRankSum=-2.072;QD=7.34;ReadPosRankSum=1.485;VQSLOD=2.5490;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:42:56.89:0,57,1917	0/1:5,0:5:4.86:5,0,46	0/0:26,0:3:5.59:0,6,39	0/0:44,0:10:19.67:0,20,219	1/1:13,0:12:4.93:26,5,0	1/1:1,9:10:2.99:280,3,0	1/1:6,17:21:21.07:603,21,0	0/1:22,0:22:46.21:46,0,69	1/1:13,0:12:10.09:53,10,0	0/1:18,0:18:4.75:349,0,5	0/1:20,1:20:99:124,0,170	0/1:17,0:17:13.51:45,0,14	0/1:16,0:16:26.59:27,0,44	0/0:17,0:15:6.12:0,6,49	0/1:6,0:5:0:1,0,0	0/0:17,0:14:3.99:0,4,39	0/1:21,0:21:54.21:86,0,54	0/1:23,0:20:49.61:50,0,50	1/1:19,0:17:21.62:336,22,0	1/1:11,0:10:0.81:77,1,0	0/1:8,0:8:5.11:45,0,5	0/1:14,0:14:13.65:84,0,14	0/0:9,0:8:9.80:0,10,47	0/0:11,0:11:2.82:0,3,28	0/0:23,0:22:30.57:0,31,1104	0/1:14,0:14:71.31:71,0,80	0/1:12,0:12:12.74:13,0,13	0/1:7,0:7:0.01:0,0,0
chr10	11945809	.	TTTTCTTTTC	T	4765.46	PASS	AB=0.793;AC=46;AF=0.821;AN=56;BaseQRankSum=-0.636;DP=479;FS=0.651;HRun=0;HaplotypeScore=101.0127;InbreedingCoeff=0.6700;MQ=50.84;MQ0=27;MQRankSum=-4.273;QD=13.69;ReadPosRankSum=-1.897;VQSLOD=3.3528;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:53.96:0,54,1381	1/1:5,0:5:12.02:145,12,0	0/0:26,0:3:5.66:0,6,40	0/0:42,0:10:19.53:0,20,185	1/1:12,0:11:6.41:70,6,0	1/1:10,0:10:5.23:177,5,0	1/1:23,0:21:14.36:358,14,0	1/1:20,0:20:22.96:239,23,0	1/1:13,0:12:11.88:225,12,0	1/1:19,0:19:39.20:566,39,0	1/1:21,0:20:11.31:233,11,0	1/1:17,1:18:18.05:300,18,0	0/1:5,12:16:10.32:131,0,10	1/1:16,1:15:17.79:193,18,0	1/1:6,0:5:5.68:28,6,0	1/1:17,0:14:12.03:145,12,0	1/1:21,0:21:10.57:193,11,0	1/1:23,0:20:17.88:294,18,0	1/1:19,0:17:38.54:358,39,0	1/1:12,0:11:21.47:157,21,0	1/1:8,0:8:17.13:103,17,0	1/1:15,0:15:18.13:228,18,0	1/1:9,0:8:9:114,9,0	1/1:11,0:11:5.64:27,6,0	0/0:23,0:22:30.49:0,30,795	1/1:14,0:14:27.64:296,28,0	1/1:12,1:13:12.01:187,12,0	0/1:5,0:5:0:0,0,0
chr10	11945810	.	TTTCTTTTC	T	6162.23	PASS	AB=1.000;AC=46;AF=0.821;AN=56;BaseQRankSum=-1.003;DP=474;FS=1.395;HRun=0;HaplotypeScore=90.9078;InbreedingCoeff=0.6445;MQ=50.80;MQ0=26;MQRankSum=-3.699;QD=17.91;ReadPosRankSum=-1.843;VQSLOD=3.7153;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:54.05:0,54,1266	1/1:4,1:5:11.01:156,11,0	0/0:24,0:3:5.59:0,6,39	0/0:42,0:10:17.08:0,17,164	1/1:3,9:11:8.92:115,9,0	1/1:10,0:10:0.21:154,0,0	1/1:22,0:20:14.32:323,14,0	1/1:20,0:20:19.01:423,19,0	1/1:2,11:12:11.88:330,12,0	1/1:19,0:19:42.11:642,42,0	1/1:10,11:20:5.56:305,6,0	1/1:4,13:17:17.55:367,18,0	0/1:17,0:16:14.43:108,0,14	1/1:6,10:14:17.34:234,17,0	1/1:7,0:6:9.03:117,9,0	1/1:5,12:14:11.01:158,11,0	1/1:7,14:21:11.97:253,12,0	1/1:9,14:20:18.02:349,18,0	1/1:19,0:17:47.56:497,48,0	1/1:13,0:12:26.87:309,27,0	1/1:8,0:8:17.48:155,17,0	1/1:3,11:14:20.83:298,21,0	1/1:1,8:8:9.01:114,9,0	1/1:2,9:11:6.02:80,6,0	0/0:24,0:23:33.53:0,34,763	1/1:2,11:13:30.04:430,30,0	1/1:2,11:13:12.04:245,12,0	0/1:4,0:4:0:0,0,0
chr10	11945815	.	TTTC	T	3036.75	PASS	AB=0.917;AC=44;AF=0.786;AN=56;BaseQRankSum=1.309;DP=438;FS=0.634;HRun=0;HaplotypeScore=73.9000;InbreedingCoeff=0.3788;MQ=47.39;MQ0=21;MQRankSum=-3.941;QD=8.55;ReadPosRankSum=-1.755;VQSLOD=2.2898;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:54.07:0,54,657	1/1:4,1:5:11:75,11,0	0/0:16,0:1:2.94:0,3,18	0/1:28,0:7:5.53:6,0,43	1/1:12,0:11:5.92:43,6,0	0/1:10,0:10:6.48:34,0,6	0/1:21,0:19:0.12:70,0,0	1/1:9,8:17:12.97:346,13,0	1/1:13,1:13:14.37:123,14,0	1/1:16,1:17:36.01:349,36,0	0/1:22,0:21:10.87:82,0,11	1/1:16,0:16:17.45:144,17,0	0/1:17,0:16:26.31:32,0,26	1/1:13,2:13:11.08:100,11,0	1/1:3,4:6:9.03:117,9,0	1/1:17,0:14:10.95:60,11,0	1/1:21,0:21:11.85:95,12,0	1/1:22,0:19:17.98:161,18,0	1/1:13,4:15:41.50:338,41,0	1/1:2,9:10:26.87:274,27,0	1/1:4,1:5:8.94:97,9,0	1/1:15,0:15:21.35:153,21,0	1/1:9,0:8:8.78:55,9,0	1/1:9,1:10:6.02:80,6,0	0/0:25,0:24:39.04:0,39,412	1/1:13,0:13:26.90:241,27,0	1/1:13,0:13:7.30:116,7,0	0/1:0,1:1:0:0,0,0
chr10	11945816	.	TTC	T	2362.62	PASS	AB=0.981;AC=45;AF=0.804;AN=56;BaseQRankSum=2.119;DP=436;FS=0.654;HRun=0;HaplotypeScore=72.7537;InbreedingCoeff=0.4692;MQ=47.38;MQ0=20;MQRankSum=-4.670;QD=7.23;ReadPosRankSum=-1.932;VQSLOD=2.6364;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:51.58:0,52,539	1/1:6,0:6:13.35:78,13,0	0/0:16,0:1:2.98:0,3,22	0/0:26,0:7:1.42:0,1,41	1/1:12,0:11:7.02:33,7,0	1/1:10,0:10:0.62:32,1,0	1/1:21,0:19:19.65:97,20,0	1/1:16,1:17:9.78:241,10,0	1/1:14,0:13:13.29:71,13,0	1/1:15,1:16:38.57:306,39,0	0/1:22,0:21:3.07:88,0,3	1/1:16,0:16:15.62:89,16,0	0/1:16,1:16:26.05:26,0,33	1/1:15,0:13:0.99:38,1,0	1/1:7,0:6:8.92:63,9,0	1/1:17,0:14:9.22:38,9,0	1/1:20,1:21:14.53:98,15,0	1/1:21,1:19:20.66:121,21,0	1/1:13,4:15:40.63:339,41,0	1/1:11,0:10:26.53:174,27,0	1/1:5,0:5:9.57:58,10,0	1/1:14,1:15:23.62:166,24,0	1/1:9,0:8:10.35:59,10,0	1/1:10,0:10:5.97:44,6,0	0/0:25,0:24:39.03:0,39,361	1/1:12,1:13:28.33:197,28,0	1/1:13,0:13:2.32:57,2,0	0/1:1,0:1:0:0,0,0
chr10	11945817	.	TC	T	1571	PASS	AB=0.973;AC=40;AF=0.714;AN=56;BaseQRankSum=3.732;DP=433;FS=1.912;HRun=1;HaplotypeScore=71.1451;InbreedingCoeff=0.1379;MQ=47.57;MQ0=21;MQRankSum=-1.628;QD=4.50;ReadPosRankSum=-1.905;VQSLOD=-0.1756;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:43:54.79:0,55,460	0/1:6,0:6:2.91:45,0,3	0/0:13,1:1:2.99:0,3,24	0/1:23,1:6:4.98:5,0,38	1/1:12,0:11:0.66:18,1,0	1/1:10,0:10:2.60:16,3,0	0/1:20,1:19:0.71:22,0,1	0/1:16,1:17:2.82:170,0,3	1/1:14,0:13:6.89:38,7,0	1/1:14,0:14:27.09:270,27,0	0/1:22,0:21:31.71:61,0,32	1/1:16,0:16:4.69:50,5,0	0/1:16,1:16:20.37:20,0,35	0/1:15,0:13:5.57:21,0,6	1/1:7,0:6:8.80:52,9,0	0/1:17,0:14:8.57:12,0,9	1/1:21,0:21:2.16:43,2,0	1/1:22,0:19:6.35:61,6,0	1/1:17,0:15:39.94:238,40,0	1/1:11,0:10:25.69:139,26,0	1/1:5,0:5:3.03:24,3,0	1/1:14,1:15:14.98:122,15,0	1/1:9,0:8:5.90:50,6,0	1/1:10,0:10:5.81:32,6,0	0/0:26,0:25:38.56:0,39,324	1/1:13,0:13:22.50:170,22,0	0/1:12,1:13:1.18:38,0,1	0/1:1,0:1:0:0,0,0
chr10	11945818	.	C	CT	983.90	PASS	AB=0.981;AC=40;AF=0.741;AN=54;BaseQRankSum=-0.798;DP=441;FS=3.346;HRun=13;HaplotypeScore=78.7263;InbreedingCoeff=0.2152;MQ=45.88;MQ0=20;MQRankSum=-2.096;QD=2.55;ReadPosRankSum=-3.385;VQSLOD=-0.6468;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:45,0:44:29.61:30,0,154	1/1:4,2:6:5.34:69,5,0	0/1:12,0:1:0:0,0,0	0/1:22,0:4:0:0,0,0	1/1:13,0:12:5.68:23,6,0	0/0:10,0:11:8.51:0,9,25	0/0:20,0:19:14.99:0,15,44	1/1:18,1:19:20.39:193,20,0	0/1:13,1:13:5.70:30,0,6	1/1:15,0:15:6.62:30,7,0	0/1:20,1:21:7.56:8,0,18	1/1:16,1:17:7.47:56,7,0	0/1:17,0:16:12.45:24,0,12	1/1:14,1:13:17.48:115,17,0	1/1:6,1:6:8.28:38,8,0	1/1:15,2:14:8.71:70,9,0	0/0:22,0:22:3.83:0,4,20	0/1:23,1:21:4.03:31,0,4	1/1:16,1:15:16.63:82,17,0	1/1:12,0:11:16.74:92,17,0	1/1:2,2:5:5.68:29,6,0	1/1:14,1:15:12.21:55,12,0	1/1:10,0:9:2.60:10,3,0	1/1:10,0:10:5.68:28,6,0	0/1:26,0:25:24.87:25,0,91	1/1:13,0:13:2.99:23,3,0	1/1:13,0:13:11.52:70,12,0	./.
chr10	11947817	.	CT	C	2931.12	PASS	AB=0.724;AC=31;AF=0.554;AN=56;BaseQRankSum=-2.964;DP=558;FS=11.932;HRun=14;HaplotypeScore=66.3939;InbreedingCoeff=0.3477;MQ=57.03;MQ0=5;MQRankSum=2.659;QD=7.88;ReadPosRankSum=5.059;VQSLOD=1.4450;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,2:35:15.97:0,16,517	1/1:5,6:12:13.10:75,13,0	0/0:30,0:7:10.66:0,11,72	0/0:18,0:10:14.16:0,14,80	0/1:7,8:16:0.92:120,0,1	0/1:2,1:13:4.93:5,0,45	0/1:9,1:14:0.42:0,0,71	0/0:20,0:23:1.94:0,2,134	0/1:7,10:16:12.97:67,0,13	0/1:11,10:21:19.47:146,0,19	1/1:7,10:17:28.63:187,29,0	1/1:4,11:16:25.77:170,26,0	0/1:3,8:13:5.50:106,0,6	1/1:2,11:13:23.79:164,24,0	0/1:6,7:13:15.92:116,0,16	1/1:3,15:16:7.75:198,8,0	1/1:17,15:30:23.55:288,24,0	1/1:8,30:39:39.57:406,40,0	0/0:15,0:24:7.83:0,8,83	0/0:17,0:22:26.81:0,27,145	0/0:3,0:8:11.58:0,12,71	1/1:3,12:16:6.62:171,7,0	0/1:8,3:11:27.93:67,0,28	1/1:8,18:24:42.08:288,42,0	0/0:15,2:15:21.45:0,21,336	0/1:15,12:22:13.88:201,0,14	1/1:8,16:24:2.74:260,3,0	1/1:4,4:7:11.89:82,12,0
chr10	11948075	.	GTT	G	1981.76	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.827;DP=642;FS=9.042;HRun=2;HaplotypeScore=80.7119;InbreedingCoeff=0.9966;MQ=83.34;MQ0=0;MQRankSum=-0.050;QD=41.29;ReadPosRankSum=0.567;VQSLOD=2.8327;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,141,2719	0/0:13,0:13:36.11:0,36,694	0/0:22,0:22:44.07:0,44,1043	0/0:20,0:20:44.95:0,45,873	0/0:24,0:24:60.20:0,60,1175	1/1:0,26:26:66.23:1076,66,0	1/1:0,22:22:63.22:1027,63,0	0/0:14,0:14:42.14:0,42,854	0/0:24,0:24:69.22:0,69,1365	0/0:30,0:30:87.24:0,87,1686	0/0:8,0:8:24.04:0,24,446	0/0:33,0:33:96.31:0,96,1909	0/0:23,0:23:69.23:0,69,1345	0/0:22,0:22:66.23:0,66,1340	0/0:25,0:25:75.25:0,75,1487	0/0:24,0:24:72.25:0,72,1460	0/0:40,0:40:99:0,120,2371	0/0:27,0:27:81.26:0,81,1605	0/0:16,0:16:48.15:0,48,887	0/0:22,0:22:66.20:0,66,1259	0/0:40,0:40:99:0,120,2355	0/0:9,0:9:24.08:0,24,487	0/0:11,0:11:33.11:0,33,668	0/0:22,0:22:66.23:0,66,1341	0/0:19,0:19:57.20:0,57,1158	0/0:20,0:20:60.20:0,60,1183	0/0:31,0:31:93.31:0,93,1850	0/0:8,0:8:24.08:0,24,472
chr10	11949588	.	T	TG	2497.60	PASS	AB=0.726;AC=22;AF=0.393;AN=56;BaseQRankSum=15.078;DP=793;FS=2.085;HRun=0;HaplotypeScore=237.3285;InbreedingCoeff=-0.4648;MQ=89.07;MQ0=3;MQRankSum=-15.706;QD=4.57;ReadPosRankSum=12.786;VQSLOD=1.5305;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:47:99:0,141,1951	0/1:10,5:15:54.68:83,0,55	0/0:43,0:39:48.51:0,49,1042	0/0:64,0:54:99:0,115,1333	0/1:15,8:23:3.64:196,0,4	0/1:22,7:29:52.43:101,0,52	0/0:16,0:16:2.64:0,3,13	0/0:48,2:50:69.16:0,69,590	0/1:10,15:24:33.27:173,0,33	0/1:22,14:36:99:180,0,178	0/1:9,7:16:24.65:70,0,25	0/1:16,13:28:39.15:158,0,39	0/1:11,12:22:4.29:165,0,4	0/1:9,17:26:15.06:213,0,15	0/1:16,21:37:95.98:222,0,96	0/1:18,15:33:83.05:179,0,83	0/1:22,10:32:60.50:128,0,61	0/1:23,4:27:37.75:38,0,223	0/1:11,4:15:32.56:33,0,102	0/1:11,18:29:53.77:167,0,54	0/1:19,6:25:53.08:66,0,53	0/1:15,8:23:28.92:104,0,29	1/1:6,12:18:13.81:123,14,0	0/1:17,3:19:16.94:17,0,71	0/0:20,0:20:60.20:0,60,839	0/1:23,14:37:99:152,0,228	0/1:17,11:28:92.16:92,0,146	0/0:4,0:4:8.59:0,9,44
chr10	11949589	.	A	ATCTG	11675.26	PASS	AB=0.747;AC=25;AF=0.446;AN=56;BaseQRankSum=11.646;DP=795;FS=6.691;HRun=0;HaplotypeScore=239.3819;InbreedingCoeff=-0.5658;MQ=88.56;MQ0=3;MQRankSum=-13.240;QD=19.20;ReadPosRankSum=10.839;VQSLOD=2.8459;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:54:99:0,141,2820	0/1:10,5:15:99:353,0,104	0/0:44,0:39:17.76:0,18,1289	0/0:63,0:53:96.70:0,97,1578	0/1:12,8:20:56.74:488,0,57	0/1:21,0:28:93.26:371,0,93	0/1:16,0:16:15.36:18,0,15	0/1:47,2:49:99:179,0,763	0/1:10,15:24:53.75:717,0,54	0/1:23,14:37:99:868,0,263	0/1:10,7:17:57.77:295,0,58	0/1:15,13:27:74.21:648,0,74	1/1:11,12:22:3.97:717,4,0	0/1:9,17:26:34.22:875,0,34	0/1:15,21:36:89.87:1039,0,90	0/1:19,15:34:22.68:888,0,23	0/1:22,10:32:93.85:486,0,94	0/1:23,4:27:99:308,0,279	0/1:12,4:16:99:220,0,151	0/1:11,17:29:51.18:802,0,51	0/1:17,6:23:99:190,0,108	0/1:10,8:24:80.21:292,0,80	1/1:6,12:18:6.77:464,7,0	0/1:17,3:19:99:132,0,128	0/0:20,0:20:60.20:0,60,1203	0/1:23,14:37:99:769,0,348	0/1:17,11:28:99:556,0,181	0/0:4,0:4:5.97:0,6,46
chr10	11950042	.	CTGTCCCATGTTA	C	26019.13	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=17.045;DP=487;FS=11.673;HRun=0;HaplotypeScore=215.2772;InbreedingCoeff=0.9920;MQ=79.81;MQ0=0;MQRankSum=-16.837;QD=91.62;ReadPosRankSum=6.161;VQSLOD=3.5026;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:57.67:0,58,3367	1/1:0,8:8:21.07:747,21,0	0/0:25,0:25:67.33:0,67,4017	0/0:13,0:13:39.13:0,39,1893	1/1:0,25:25:54.18:1758,54,0	0/0:30,0:30:90.31:0,90,5286	0/0:12,0:12:36.12:0,36,2213	0/0:36,0:36:99:0,105,6275	1/1:0,15:15:42.14:1656,42,0	1/1:0,21:21:57.18:2077,57,0	1/1:0,14:14:30.10:1023,30,0	1/1:0,10:10:30.10:1184,30,0	1/1:0,23:23:51.18:2013,51,0	1/1:0,18:18:54.19:2130,54,0	1/1:0,14:14:33.11:1302,33,0	1/1:0,15:15:39.13:1540,39,0	1/1:0,10:10:18.06:710,18,0	1/1:0,7:7:15.05:511,15,0	0/0:17,0:17:48.16:0,48,2788	0/0:25,0:25:69.19:0,69,4074	0/0:13,0:13:39.13:0,39,2219	1/1:0,13:13:36.12:920,36,0	1/1:0,26:26:65.86:1945,66,0	1/1:0,7:7:15.05:577,15,0	0/0:12,0:12:36.12:0,36,2291	1/1:0,23:23:69.06:2399,69,0	1/1:0,29:29:75.26:2896,75,0	1/1:0,6:6:18.06:630,18,0
chr10	11952602	.	GC	G	2571.26	PASS	AB=0.789;AC=38;AF=0.679;AN=56;BaseQRankSum=-1.704;DP=405;FS=1.637;HRun=12;HaplotypeScore=53.6280;InbreedingCoeff=0.3251;MQ=79.64;MQ0=2;MQRankSum=-1.295;QD=7.65;ReadPosRankSum=4.479;VQSLOD=2.0177;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:16,6:22:17.37:55,0,17	1/1:1,3:4:2.98:23,3,0	0/0:14,1:15:0.86:0,1,154	0/0:18,0:15:4.97:0,5,74	1/1:4,6:13:18.99:127,19,0	0/0:9,0:10:9.30:0,9,64	0/1:10,1:17:11.26:11,0,60	0/0:12,0:14:8.84:0,9,70	1/1:5,4:9:5.96:46,6,0	1/1:3,5:9:16.98:122,17,0	1/1:2,8:13:24.85:162,25,0	1/1:18,5:26:41.92:290,42,0	1/1:4,7:11:11.93:91,12,0	1/1:5,7:12:5.94:46,6,0	1/1:6,10:16:17.91:137,18,0	0/1:5,12:19:2.25:136,0,2	1/1:11,26:45:76.03:510,76,0	0/1:6,10:18:5.46:126,0,5	0/1:13,0:13:19.94:20,0,81	0/1:7,0:8:0:0,0,0	0/0:6,0:10:2.84:0,3,14	1/1:1,5:6:11.90:88,12,0	0/1:2,3:5:0.02:0,0,0	1/1:10,10:24:35.68:238,36,0	0/1:5,2:7:3.95:18,0,4	1/1:6,6:13:18.39:140,18,0	1/1:7,8:16:37.57:269,38,0	1/1:0,9:9:8.96:70,9,0
chr10	11953238	.	G	GGT	580.10	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=-1.089;DP=443;FS=20.166;HRun=0;HaplotypeScore=95.3822;InbreedingCoeff=0.7056;MQ=58.16;MQ0=13;MQRankSum=0.374;QD=9.51;ReadPosRankSum=0.601;VQSLOD=1.9182;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:54.06:0,54,673	0/0:10,0:10:26.92:0,27,309	0/1:18,0:7:15.14:15,0,93	0/0:18,0:8:8.99:0,9,88	0/0:11,0:11:15.01:0,15,189	1/1:6,7:11:12.04:220,12,0	1/1:4,25:30:27.09:469,27,0	0/0:17,0:16:39.02:0,39,478	0/0:13,0:12:18.02:0,18,254	0/0:15,0:15:39.05:0,39,478	0/0:8,0:7:12.04:0,12,172	0/0:20,0:20:38.85:0,39,426	0/0:15,0:15:36.01:0,36,465	0/0:8,0:8:11.64:0,12,148	0/0:18,0:18:35.80:0,36,374	0/0:9,0:8:14.97:0,15,191	0/0:20,0:19:53.87:0,54,636	0/0:21,0:21:57.15:0,57,791	0/0:12,0:11:18.06:0,18,257	0/0:9,0:9:21.04:0,21,264	0/0:30,0:29:53.57:0,54,634	0/0:11,0:11:24.04:0,24,319	0/0:12,0:12:27.03:0,27,343	0/0:17,0:17:14.63:0,15,149	0/0:23,0:22:59.88:0,60,828	0/0:16,0:15:42.10:0,42,573	0/0:13,0:13:29.98:0,30,374	0/0:11,0:11:32.91:0,33,361
chr10	11953320	.	TAAAATA	T	5042	PASS	AB=0.632;AC=29;AF=0.558;AN=52;BaseQRankSum=7.443;DP=369;FS=1.223;HRun=0;HaplotypeScore=140.5357;InbreedingCoeff=0.5865;MQ=57.72;MQ0=4;MQRankSum=-6.824;QD=26.12;ReadPosRankSum=2.847;VQSLOD=4.3520;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:86.32:0,86,2518	./.	0/0:18,0:13:28.96:0,29,735	0/0:19,0:8:6.02:0,6,202	0/0:3,11:14:1.72:0,2,4	./.	1/1:0,7:7:6.02:129,6,0	1/1:10,21:29:66.22:1300,66,0	1/1:3,12:15:11.91:217,12,0	1/1:2,11:13:33.11:623,33,0	0/0:1,9:10:1.25:0,1,3	0/1:5,7:12:3.16:32,0,3	1/1:1,11:12:9.03:172,9,0	1/1:1,12:13:4.25:126,4,0	1/1:2,18:20:8.14:192,8,0	1/1:2,7:9:2.50:123,3,0	1/1:2,9:11:15.05:323,15,0	1/1:4,6:10:2.48:100,2,0	1/1:2,12:14:36.09:584,36,0	0/0:1,3:4:0:0,0,0	0/0:5,1:6:0:0,0,0	0/0:3,4:7:2.49:0,2,6	0/0:2,11:13:0.82:0,1,3	0/0:2,10:12:0.47:0,0,1	0/0:25,0:25:60.21:0,60,1872	1/1:0,12:12:36.12:707,36,0	1/1:1,9:11:12.04:219,12,0	1/1:0,3:3:9.03:194,9,0
chr10	11953635	.	C	CTGTG	3186.56	PASS	AB=0.757;AC=32;AF=0.667;AN=48;BaseQRankSum=-1.574;DP=623;FS=15.686;HRun=0;HaplotypeScore=120.7387;InbreedingCoeff=0.2352;MQ=63.64;MQ0=12;MQRankSum=-0.371;QD=7.64;ReadPosRankSum=-1.151;VQSLOD=1.7548;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:21.03:0,21,263	1/1:5,0:9:5.49:24,5,0	./.	./.	1/1:15,6:25:3.01:71,3,0	0/1:12,0:20:15.48:16,0,15	1/1:20,0:31:11.86:51,12,0	./.	1/1:21,4:27:12.04:259,12,0	1/1:24,5:34:43.98:578,44,0	./.	1/1:20,4:28:14.31:235,14,0	0/1:20,0:20:28.55:224,0,29	1/1:13,0:22:2.61:12,3,0	1/1:12,13:30:23.55:447,24,0	0/1:15,7:25:27.96:335,0,28	1/1:11,5:18:3.01:70,3,0	0/1:9,7:17:34.46:160,0,34	0/0:16,0:19:20.75:0,21,176	0/0:10,0:12:3:0,3,28	0/0:31,0:34:6.01:0,6,56	1/1:7,2:10:3.01:71,3,0	0/1:10,0:17:9.76:10,0,102	0/1:21,0:34:61.88:78,0,62	0/0:13,0:13:15.03:0,15,202	1/1:11,4:17:15.05:284,15,0	1/1:12,6:20:14.74:350,15,0	1/1:7,1:7:3.01:70,3,0
chr10	11953703	.	TA	T	515.45	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=8.710;DP=477;FS=5.881;HRun=1;HaplotypeScore=79.7100;InbreedingCoeff=0.9791;MQ=87.18;MQ0=0;MQRankSum=-7.178;QD=11.99;ReadPosRankSum=-2.699;VQSLOD=1.0794;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:66.23:0,66,1055	0/0:10,0:10:30.10:0,30,479	0/0:23,0:22:63.16:0,63,915	0/0:28,0:26:36.49:0,36,969	0/0:26,0:26:66.22:0,66,1045	0/0:11,0:11:27.09:0,27,432	0/0:20,0:20:54.18:0,54,856	1/1:0,10:10:29.20:186,29,0	0/0:20,0:20:54.18:0,54,863	0/0:22,0:22:63.21:0,63,1007	0/0:17,0:17:48.16:0,48,767	0/0:14,0:14:36.12:0,36,570	0/0:13,0:13:35.90:0,36,575	0/0:14,0:13:27.08:0,27,409	0/0:25,0:25:60.19:0,60,936	0/0:18,0:18:51.17:0,51,815	0/0:20,0:20:53.77:0,54,825	0/0:9,0:9:24.08:0,24,384	1/1:3,10:13:34.70:207,35,0	1/1:0,3:3:8.63:46,9,0	1/1:2,15:17:40.35:232,40,0	0/0:8,0:8:21.05:0,21,329	0/0:19,0:19:45.15:0,45,719	0/0:22,0:22:57.19:0,57,881	0/0:21,0:21:63.21:0,63,1007	0/0:29,0:29:87.30:0,87,1390	0/0:13,0:13:39.08:0,39,550	0/0:10,0:10:27.09:0,27,432
chr10	11953705	.	CTCAGAAGTG	C	2214.82	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=9.100;DP=467;FS=5.064;HRun=0;HaplotypeScore=141.3452;InbreedingCoeff=0.9798;MQ=88.48;MQ0=0;MQRankSum=-8.872;QD=59.86;ReadPosRankSum=-1.345;VQSLOD=3.0948;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:72.25:0,72,3351	0/0:10,0:10:30.10:0,30,1446	0/0:22,0:22:60.21:0,60,2711	0/0:26,0:25:54.36:0,54,2580	0/0:27,0:27:69.24:0,69,3275	0/0:12,0:12:30.10:0,30,1512	0/0:20,0:20:57.20:0,57,2530	1/1:0,8:8:24.08:581,24,0	0/0:18,0:18:54.19:0,54,2689	0/0:21,0:21:63.21:0,63,2676	0/0:17,0:17:48.16:0,48,2428	0/0:15,0:15:39.09:0,39,1747	0/0:13,0:13:35.86:0,36,1809	0/0:13,0:12:24.08:0,24,1165	0/0:24,0:24:57.18:0,57,2606	0/0:18,0:18:51.16:0,51,2348	0/0:20,0:20:54.19:0,54,2661	0/0:8,0:8:24.08:0,24,1159	1/1:0,10:10:27.09:640,27,0	1/1:0,3:3:9.03:213,9,0	1/1:1,15:16:39.05:936,39,0	0/0:8,0:8:21.05:0,21,946	0/0:19,0:19:51.16:0,51,2221	0/0:23,0:23:63.17:0,63,2919	0/0:21,0:21:63.22:0,63,3189	0/0:29,0:29:87.30:0,87,4057	0/0:12,0:12:36.08:0,36,1567	0/0:10,0:10:27.09:0,27,1207
chr10	11954804	.	G	GT	5477.59	PASS	AB=0.834;AC=25;AF=0.446;AN=56;BaseQRankSum=20.236;DP=1078;FS=2.953;HRun=1;HaplotypeScore=168.8499;InbreedingCoeff=-0.7994;MQ=52.12;MQ0=37;MQRankSum=-14.111;QD=5.48;ReadPosRankSum=2.048;VQSLOD=1.9335;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:49,30:75:99:781,0,1601	0/1:10,2:11:55.74:56,0,335	0/1:30,1:7:84.39:135,0,84	0/1:28,6:7:79.28:79,0,145	0/0:24,0:21:51.14:0,51,676	0/1:21,3:22:69.03:69,0,666	0/1:35,13:46:99:398,0,875	0/1:30,24:51:99:704,0,922	0/1:35,9:43:99:143,0,974	0/0:29,3:30:3.08:0,3,1006	0/1:16,5:20:87.64:88,0,513	0/1:32,9:36:99:176,0,895	0/1:33,8:40:99:210,0,982	0/1:27,10:33:99:229,0,721	0/1:41,7:45:99:142,0,1215	0/1:28,5:31:99:184,0,799	0/1:40,11:49:99:362,0,1136	0/1:35,10:45:99:314,0,1148	0/1:39,10:41:99:292,0,1125	0/1:28,4:29:40.61:41,0,905	0/1:54,16:63:99:162,0,1524	0/0:22,0:22:48.06:0,48,612	0/1:28,2:30:0.88:1,0,882	0/1:39,18:50:99:330,0,991	0/1:20,3:20:28.75:29,0,679	0/1:24,6:29:99:183,0,838	0/1:36,8:43:99:199,0,1110	0/1:17,5:22:99:170,0,451
chr10	11955060	.	C	CTCGG	656.31	PASS	AB=0.871;AC=12;AF=0.214;AN=56;BaseQRankSum=8.015;DP=818;FS=60.636;HRun=0;HaplotypeScore=130.9389;InbreedingCoeff=-0.2682;MQ=63.56;MQ0=12;MQRankSum=-8.029;QD=2.28;ReadPosRankSum=-2.383;VQSLOD=-0.6027;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,156,3099	0/1:1,1:2:56.89:80,0,57	0/0:26,0:25:75.22:0,75,1377	0/0:24,0:22:66.22:0,66,1268	0/1:25,4:26:8.05:8,0,1456	0/1:22,4:24:99:107,0,1192	0/0:35,3:35:99:0,105,2109	0/0:26,0:26:75.25:0,75,1521	0/0:23,2:23:66.23:0,66,1367	0/1:21,4:22:37.10:37,0,1185	0/1:19,3:20:32.12:32,0,939	0/1:28,3:30:82.69:83,0,1637	0/0:28,0:28:52.53:0,53,1574	0/1:24,4:27:99:177,0,1323	0/0:37,4:38:27.99:0,28,2204	0/1:19,3:20:26.36:26,0,1097	0/0:43,1:43:99:0,126,2584	0/0:34,0:34:96.33:0,96,1989	0/0:26,1:23:69.20:0,69,1335	0/1:18,7:19:99:115,0,1002	0/0:38,0:38:99:0,114,2288	0/0:25,0:25:54.25:0,54,1401	0/1:18,2:19:31.18:31,0,1015	0/0:46,2:46:99:0,135,2772	0/1:24,0:23:17.15:17,0,1301	0/0:37,1:37:99:0,111,2248	0/1:32,2:34:92.66:93,0,1703	0/0:16,0:16:48.14:0,48,906
chr10	11955436	.	C	CT	17810.78	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-2.242;DP=727;FS=0.617;HRun=3;HaplotypeScore=98.7649;InbreedingCoeff=0.9899;MQ=80.77;MQ0=2;MQRankSum=-5.445;QD=36.80;ReadPosRankSum=3.017;VQSLOD=4.8597;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,152,1805	1/1:0,4:4:9.03:126,9,0	0/0:23,0:22:57.11:0,57,647	0/0:28,0:27:62.30:0,62,763	1/1:1,28:29:78.13:1026,78,0	1/1:1,14:15:33.11:462,33,0	1/1:1,29:30:81.27:1134,81,0	0/0:28,0:28:75.21:0,75,882	1/1:3,30:33:84.28:1176,84,0	1/1:1,36:37:99:1513,108,0	1/1:0,18:18:48.16:672,48,0	1/1:0,24:24:60.20:838,60,0	1/1:2,24:26:75.25:1039,75,0	1/1:2,18:20:54.18:755,54,0	1/1:0,34:34:96.32:1345,96,0	1/1:1,19:20:48.16:672,48,0	1/1:0,33:33:87.29:1218,87,0	1/1:1,19:19:48.16:672,48,0	0/0:19,0:19:48.14:0,48,566	0/0:22,0:22:56.72:0,57,666	0/0:41,0:41:99:0,111,1332	1/1:0,24:24:69.10:900,69,0	1/1:1,16:17:48.12:643,48,0	1/1:1,30:31:81.27:1134,81,0	0/0:27,0:27:81.25:0,81,972	1/1:0,27:27:78.23:1057,78,0	1/1:0,27:27:78.26:1092,78,0	1/1:3,12:15:24.08:336,24,0
chr10	11955718	.	ACGTCT	A	22531.88	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=1.541;DP=704;FS=3.751;HRun=0;HaplotypeScore=167.4377;InbreedingCoeff=0.9972;MQ=89.82;MQ0=0;MQRankSum=-6.037;QD=57.92;ReadPosRankSum=7.829;VQSLOD=4.7842;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,154,4772	1/1:0,14:14:42.14:915,42,0	0/0:29,0:29:84.26:0,84,2389	0/0:36,0:36:99:0,102,2830	1/1:0,20:20:57.19:1182,57,0	0/0:12,0:12:36.12:0,36,1088	0/0:24,0:24:72.25:0,72,2166	0/0:42,0:42:99:0,111,2962	1/1:1,28:29:72.25:1582,72,0	1/1:0,20:20:60.21:1292,60,0	1/1:0,14:14:42.12:877,42,0	1/1:2,20:22:54.19:1189,54,0	1/1:0,24:24:63.22:1394,63,0	1/1:4,28:32:69.24:1500,69,0	1/1:0,40:40:99:2462,111,0	1/1:1,24:25:66.23:1448,66,0	1/1:1,13:14:33.11:735,33,0	1/1:0,7:7:14.98:285,15,0	0/0:34,0:34:93.32:0,93,2475	0/0:40,0:40:84.20:0,84,2334	0/0:32,0:32:69.22:0,69,1911	1/1:0,20:20:57.20:1255,57,0	1/1:0,19:19:54.19:1202,54,0	1/1:0,24:24:57.11:1220,57,0	0/0:15,0:15:45.15:0,45,1413	1/1:0,24:24:72.21:1555,72,0	1/1:1,32:33:86.95:1902,87,0	1/1:0,8:8:24.08:535,24,0
chr10	11956834	.	TTCCAAC	T	9700.64	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=5.328;DP=458;FS=8.561;HRun=0;HaplotypeScore=110.9382;InbreedingCoeff=0.9590;MQ=76.77;MQ0=0;MQRankSum=-14.710;QD=42.73;ReadPosRankSum=1.675;VQSLOD=4.5517;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,144,4910	1/1:1,10:11:21.07:480,21,0	0/0:23,0:23:40.46:0,40,1665	0/0:19,0:19:49.38:0,49,1343	1/1:2,8:10:14.71:219,15,0	0/0:12,0:12:36.11:0,36,1182	0/0:25,0:25:72.22:0,72,2324	0/0:25,0:25:66.21:0,66,2127	1/1:0,12:12:27.09:629,27,0	1/1:1,11:12:33.03:670,33,0	1/1:1,21:22:38.89:655,39,0	1/1:0,17:17:39.13:908,39,0	1/1:0,10:10:15.05:349,15,0	1/1:0,8:8:15.05:349,15,0	1/1:0,15:15:39.13:880,39,0	1/1:1,15:16:30.10:691,30,0	1/1:2,13:15:18.06:419,18,0	1/1:0,4:4:6.02:140,6,0	0/0:15,0:15:42.10:0,42,1205	0/0:17,0:17:51.16:0,51,1714	0/0:25,0:24:72.21:0,72,2200	1/1:0,15:15:27.05:549,27,0	1/1:1,8:9:20.94:386,21,0	1/1:1,16:17:27.05:577,27,0	0/0:18,0:18:48.16:0,48,1603	1/1:0,16:16:44.99:801,45,0	1/1:0,16:16:39.09:857,39,0	1/1:0,2:2:6.02:140,6,0
chr10	11956974	.	G	GA	23062.30	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=11.925;DP=615;FS=4.128;HRun=2;HaplotypeScore=179.9560;InbreedingCoeff=0.9986;MQ=71.64;MQ0=0;MQRankSum=-7.888;QD=44.10;ReadPosRankSum=0.501;VQSLOD=3.9938;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:99:0,99,1364	1/1:2,10:13:33.07:492,33,0	0/0:19,0:18:54.06:0,54,708	0/0:12,0:12:29.76:0,30,364	1/1:0,21:21:60.20:959,60,0	1/1:2,14:16:42.14:659,42,0	1/1:1,30:31:90.31:1436,90,0	1/1:0,30:30:90.31:1437,90,0	1/1:1,14:15:45.15:695,45,0	1/1:3,26:29:84.29:1320,84,0	1/1:0,16:16:48.16:767,48,0	1/1:0,23:23:66.23:1052,66,0	1/1:0,20:20:54.18:851,54,0	1/1:1,19:20:57.19:885,57,0	1/1:2,24:26:75.25:1184,75,0	1/1:2,30:32:84.29:1340,84,0	1/1:2,23:25:66.22:1045,66,0	1/1:0,14:14:42.14:671,42,0	1/1:2,16:18:48.16:758,48,0	1/1:2,22:24:72.24:1123,72,0	1/1:0,15:15:45.15:718,45,0	1/1:2,20:22:60.20:957,60,0	1/1:0,25:25:72.24:1136,72,0	1/1:2,22:24:47.99:740,48,0	0/0:28,0:28:84.26:0,84,1142	1/1:3,22:25:72.21:1111,72,0	1/1:1,31:32:87.30:1389,87,0	1/1:0,7:7:21.07:336,21,0
chr10	11957022	.	AG	A	2710.49	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-1.861;DP=592;FS=4.288;HRun=1;HaplotypeScore=237.3500;InbreedingCoeff=0.9997;MQ=61.39;MQ0=0;MQRankSum=-3.693;QD=37.13;ReadPosRankSum=-1.667;VQSLOD=2.5132;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:75.26:0,75,1198	0/0:14,0:14:36.12:0,36,574	0/0:25,0:23:34.27:0,34,817	0/0:29,0:25:72.23:0,72,1106	0/0:22,0:22:51.17:0,51,815	0/0:21,0:21:48.16:0,48,757	0/0:27,0:27:75.22:0,75,1152	1/1:0,21:21:60.19:822,60,0	0/0:14,0:14:36.12:0,36,565	0/0:21,0:21:60.11:0,60,880	0/0:15,0:15:45.14:0,45,695	0/0:23,0:23:66.23:0,66,1052	0/0:16,0:16:39.09:0,39,595	0/0:21,0:21:60.02:0,60,953	0/0:26,0:26:66.23:0,66,1053	0/0:35,0:35:90.31:0,90,1436	0/0:27,0:27:75.25:0,75,1187	0/0:17,0:17:48.14:0,48,731	1/1:0,12:12:36.12:501,36,0	1/1:0,22:22:63.21:880,63,0	1/1:0,18:18:51.08:668,51,0	0/0:19,0:19:48.16:0,48,765	0/0:15,0:15:36.12:0,36,573	0/0:28,0:28:66.23:0,66,1054	0/0:22,0:22:63.19:0,63,980	0/0:16,0:16:42.10:0,42,633	0/0:29,0:29:69.24:0,69,1099	0/0:12,0:12:33.11:0,33,525
chr10	11957097	.	A	ATTTT	31869.60	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=4.844;DP=539;FS=39.705;HRun=2;HaplotypeScore=171.3083;InbreedingCoeff=0.9962;MQ=62.55;MQ0=0;MQRankSum=-9.877;QD=67.38;ReadPosRankSum=4.470;VQSLOD=2.1119;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:42.08:0,42,730	1/1:1,6:8:24.08:650,24,0	0/0:10,0:9:21.05:0,21,375	0/0:21,0:23:35.38:0,35,802	1/1:7,10:18:39.13:918,39,0	1/1:5,22:27:75.22:1913,75,0	1/1:16,6:22:63.22:1550,63,0	1/1:13,18:32:84.22:2072,84,0	1/1:4,17:23:60.21:1616,60,0	1/1:6,17:23:63.11:1621,63,0	1/1:2,7:10:24.08:651,24,0	1/1:4,17:22:57.20:1546,57,0	1/1:3,13:16:41.90:1033,42,0	1/1:5,14:19:57.15:1477,57,0	1/1:3,33:37:99:2914,108,0	1/1:6,21:32:75.26:2014,75,0	1/1:6,10:17:36.08:910,36,0	1/1:5,5:11:30.03:644,30,0	1/1:11,6:17:45.12:1097,45,0	1/1:4,15:18:48.16:1267,48,0	1/1:11,9:20:48.09:1113,48,0	1/1:5,5:10:24.08:588,24,0	1/1:4,8:12:36.12:899,36,0	1/1:7,11:18:51.07:1097,51,0	0/0:13,0:13:33.11:0,33,614	1/1:6,16:24:72.19:1780,72,0	1/1:7,19:28:78.74:1997,79,0	1/1:5,3:8:24.04:503,24,0
chr10	11957493	.	AAC	A	1632.61	PASS	AB=0.988;AC=22;AF=0.393;AN=56;BaseQRankSum=3.380;DP=536;FS=10.372;HRun=0;HaplotypeScore=207.7278;InbreedingCoeff=-0.3695;MQ=50.48;MQ0=6;MQRankSum=-5.529;QD=4.41;ReadPosRankSum=-2.454;VQSLOD=1.7413;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,105,1824	0/0:8,0:8:3.37:0,3,9	0/0:29,0:15:33:0,33,458	0/0:28,0:11:30.01:0,30,420	0/1:25,0:25:88.95:219,0,89	0/1:9,0:8:54.27:115,0,54	0/1:16,1:17:61.50:61,0,236	0/1:17,4:20:93.73:94,0,482	0/1:20,0:20:12.25:12,0,30	0/1:23,0:23:99:130,0,181	0/1:13,0:13:18.69:160,0,19	0/0:10,0:10:6.22:0,6,17	0/1:18,0:18:12.65:14,0,13	0/1:15,0:15:4.55:80,0,5	0/1:26,0:26:10.60:170,0,11	0/1:16,0:16:8.69:40,0,9	0/1:20,0:19:29.13:29,0,36	0/1:19,0:19:36.18:51,0,36	0/1:13,0:13:8.45:8,0,187	0/1:16,0:16:73.11:87,0,73	1/1:7,1:4:0.30:33,0,0	0/1:14,0:14:90.08:104,0,90	1/1:18,0:18:17.18:283,17,0	0/0:23,0:22:21.05:0,21,190	0/0:24,0:24:72.24:0,72,1139	0/1:25,0:25:39.97:40,0,188	0/1:34,0:33:60.62:61,0,63	0/0:6,0:6:3.37:0,3,9
chr10	11957496	.	AAC	A	1735.94	PASS	AB=0.987;AC=24;AF=0.429;AN=56;BaseQRankSum=2.294;DP=544;FS=9.706;HRun=0;HaplotypeScore=209.7159;InbreedingCoeff=-0.2215;MQ=50.60;MQ0=6;MQRankSum=-7.306;QD=4.65;ReadPosRankSum=-1.996;VQSLOD=1.8060;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,108,1848	0/0:9,0:9:3.37:0,3,9	0/0:30,0:15:27.15:0,27,402	0/0:31,0:12:29.10:0,29,409	0/1:25,0:25:38.89:229,0,39	0/1:9,0:8:39.99:112,0,40	0/1:17,0:17:97.39:97,0,143	0/1:21,0:20:99:107,0,324	0/1:20,0:20:3.59:4,0,31	0/1:23,1:24:99:113,0,171	0/1:13,0:13:3.33:151,0,3	0/0:12,0:12:6.22:0,6,16	0/1:16,0:16:11.66:16,0,12	0/1:15,1:16:4.94:66,0,5	1/1:24,2:26:7.42:209,7,0	1/1:18,0:18:0.91:45,1,0	0/1:22,0:21:28.30:28,0,33	0/1:19,0:19:35.59:53,0,36	0/1:15,0:15:12.63:13,0,113	0/1:15,0:15:17.39:91,0,17	1/1:7,0:4:1.65:37,2,0	0/1:14,0:14:21.28:113,0,21	1/1:18,0:18:18.17:292,18,0	0/0:21,0:20:12.48:0,12,109	0/0:25,0:25:69.18:0,69,1074	0/1:22,2:24:56.65:57,0,86	0/1:33,1:33:31.40:63,0,31	0/0:7,0:7:3.37:0,3,9
chr10	11957500	.	ACAACAACAACAACAAC	A	27957.94	PASS	AB=0.514;AC=47;AF=0.839;AN=56;BaseQRankSum=12.204;DP=541;FS=1.607;HRun=0;HaplotypeScore=223.3352;InbreedingCoeff=0.8116;MQ=48.80;MQ0=6;MQRankSum=-7.603;QD=65.63;ReadPosRankSum=2.741;VQSLOD=4.6266;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,105,6850	1/1:0,9:9:8.98:311,9,0	0/0:27,0:11:30.10:0,30,892	0/0:31,0:12:35.48:0,35,1201	1/1:0,28:28:54.05:1732,54,0	1/1:3,6:9:27.05:974,27,0	1/1:9,8:17:48.95:1461,49,0	1/1:15,0:15:44.96:722,45,0	1/1:0,21:21:45.15:2196,45,0	1/1:2,22:24:56.68:1864,57,0	1/1:0,14:14:30.10:1072,30,0	1/1:1,12:13:15.05:618,15,0	1/1:2,18:19:20.85:907,21,0	1/1:3,13:16:27.09:1065,27,0	1/1:2,25:27:48.16:2185,48,0	1/1:0,18:18:14.85:723,15,0	1/1:0,22:22:15.01:488,15,0	1/1:0,19:19:15.05:664,15,0	1/1:0,15:15:45.07:875,45,0	1/1:0,16:16:42.09:1580,42,0	1/1:7,1:7:15.05:358,15,0	1/1:1,12:13:24.03:762,24,0	1/1:0,19:19:45.42:2020,45,0	0/1:1,17:18:99:813,0,118	0/0:21,0:21:63.20:0,63,3544	1/1:2,21:23:60.14:1572,60,0	1/1:2,32:34:56.56:2704,57,0	1/1:0,7:7:6.02:292,6,0
chr10	11957515	.	AC	A	7028.38	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=14.220;DP=566;FS=4.126;HRun=1;HaplotypeScore=198.2808;InbreedingCoeff=0.9304;MQ=59.98;MQ0=3;MQRankSum=-9.123;QD=16.01;ReadPosRankSum=5.730;VQSLOD=5.2207;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,117,1532	1/1:9,0:9:8.88:58,9,0	0/0:28,0:19:57.17:0,57,698	0/0:36,0:22:53.05:0,53,661	1/1:28,0:28:49.51:502,50,0	1/1:6,6:12:36.05:397,36,0	1/1:9,5:14:33.80:345,34,0	1/1:14,4:17:51.14:607,51,0	1/1:21,0:21:44.55:308,45,0	1/1:24,0:24:41.77:362,42,0	1/1:15,0:15:33.05:371,33,0	1/1:13,0:13:14.88:112,15,0	1/1:20,0:19:20.82:155,21,0	1/1:15,1:16:26.87:237,27,0	1/1:26,1:27:46.59:388,47,0	1/1:18,0:18:14.68:108,15,0	1/1:22,0:22:11.95:117,12,0	1/1:20,0:20:17.93:161,18,0	1/1:18,0:18:42.02:448,42,0	1/1:17,0:17:40.60:344,41,0	1/1:9,1:10:18.01:208,18,0	1/1:15,0:15:26.24:255,26,0	1/1:19,0:19:44.76:408,45,0	1/1:18,0:18:18.44:131,18,0	0/0:23,0:23:69.20:0,69,913	1/1:23,0:23:53.25:523,53,0	1/1:35,0:34:59.21:445,59,0	1/1:7,0:7:5.92:39,6,0
chr10	11957521	.	A	AAC	10396.86	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=11.042;DP=538;FS=8.210;HRun=0;HaplotypeScore=195.4871;InbreedingCoeff=0.9437;MQ=65.18;MQ0=3;MQRankSum=-9.015;QD=25.48;ReadPosRankSum=4.667;VQSLOD=5.2503;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,108,1576	1/1:9,0:9:11.81:90,12,0	0/0:31,0:23:59.37:0,59,927	0/0:35,0:24:66.62:0,67,882	1/1:25,0:25:55.23:817,55,0	1/1:12,0:12:36.07:589,36,0	1/1:16,0:16:31.78:491,32,0	1/1:6,22:28:81.19:1306,81,0	1/1:19,0:19:44.29:305,44,0	1/1:17,1:18:41.61:463,42,0	1/1:14,0:15:38.97:581,39,0	1/1:12,0:12:14.72:130,15,0	1/1:15,0:16:20.65:188,21,0	1/1:15,1:16:29.59:327,30,0	1/1:23,1:24:45.87:514,46,0	1/1:14,0:14:14.37:134,14,0	1/1:19,0:19:17.89:193,18,0	1/1:15,0:15:17.91:217,18,0	1/1:14,3:17:45.03:739,45,0	1/1:17,0:18:43.19:487,43,0	1/1:2,8:10:18.01:303,18,0	1/1:9,0:12:29.97:436,30,0	1/1:22,0:22:48.91:632,49,0	1/1:14,0:14:20.28:167,20,0	0/0:24,0:24:72.14:0,72,1020	1/1:18,2:20:53.17:756,53,0	1/1:27,1:27:58.99:493,59,0	1/1:7,0:7:5.91:38,6,0
chr10	11957530	.	CAACT	C	1172.43	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=2.999;DP=568;FS=6.557;HRun=0;HaplotypeScore=245.7906;InbreedingCoeff=0.9501;MQ=76.54;MQ0=1;MQRankSum=-6.210;QD=40.43;ReadPosRankSum=0.387;VQSLOD=3.0243;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:93.23:0,93,2246	0/0:9,0:9:18.06:0,18,415	0/0:39,0:32:69.64:0,70,2071	0/0:36,0:28:64.40:0,64,1544	0/0:25,0:25:54.01:0,54,1227	1/1:0,13:13:39.13:700,39,0	1/1:3,13:16:39:594,39,0	0/0:36,0:36:96.26:0,96,2289	0/0:19,0:19:42.08:0,42,1018	0/0:20,0:20:54.13:0,54,1341	0/0:16,0:16:41.99:0,42,945	0/0:11,0:11:14.98:0,15,325	0/0:15,0:15:21.07:0,21,545	0/0:17,0:17:30.10:0,30,698	0/0:25,0:25:51.12:0,51,1244	0/0:16,0:16:18.06:0,18,467	0/0:19,0:19:18.01:0,18,408	0/0:19,0:19:33.03:0,33,706	0/0:16,0:16:39.11:0,39,932	0/0:17,0:17:39.13:0,39,949	0/0:10,0:10:17.99:0,18,326	0/0:12,0:12:30.05:0,30,715	0/0:24,0:24:50.69:0,51,1192	0/0:14,0:14:14.91:0,15,318	0/0:19,0:19:54.19:0,54,1392	0/0:25,0:25:65.98:0,66,1537	0/0:30,0:29:69.17:0,69,1644	0/0:10,0:10:12.04:0,12,311
chr10	11958764	.	AAGAAAGGT	A	1238.44	PASS	AB=0.939;AC=7;AF=0.125;AN=56;BaseQRankSum=3.944;DP=657;FS=23.755;HRun=0;HaplotypeScore=252.6923;InbreedingCoeff=-0.1470;MQ=58.85;MQ0=1;MQRankSum=-5.635;QD=8.78;ReadPosRankSum=-8.113;VQSLOD=-0.5249;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:60.72:0,61,2047	0/0:5,0:5:12.03:0,12,299	0/0:24,0:10:24.83:0,25,402	0/0:24,0:15:23.50:0,24,429	0/0:36,0:36:27.61:0,28,1638	0/0:22,0:22:50.89:0,51,1036	0/0:18,0:18:10.31:0,10,433	0/1:11,11:22:99:717,0,158	0/0:19,0:19:33.63:0,34,867	0/0:36,0:36:52.63:0,53,2084	0/0:17,0:17:24.06:0,24,592	0/0:16,0:16:23.07:0,23,683	0/0:24,0:24:27.66:0,28,1029	0/0:25,0:25:13.98:0,14,1158	0/0:27,0:27:54.13:0,54,1335	0/0:25,0:25:36.38:0,36,1167	0/1:29,1:29:15.49:15,0,1233	0/1:14,1:15:41.79:42,0,792	0/1:8,0:8:99:151,0,104	0/1:31,0:31:99:178,0,836	0/1:16,0:16:99:250,0,391	0/0:19,0:19:21.94:0,22,1038	0/0:31,0:31:46.94:0,47,1723	0/1:19,0:19:14.38:14,0,827	0/0:43,0:42:99:0,126,4150	0/0:29,0:29:75.30:0,75,2039	0/0:41,0:41:47.15:0,47,1972	0/0:9,0:9:14.94:0,15,327
chr10	11958772	.	T	TAGAA	6112.05	PASS	AB=1.000;AC=31;AF=0.554;AN=56;BaseQRankSum=3.314;DP=619;FS=2.198;HRun=0;HaplotypeScore=188.1978;InbreedingCoeff=-0.1734;MQ=58.23;MQ0=1;MQRankSum=-2.303;QD=12.25;ReadPosRankSum=3.374;VQSLOD=4.3797;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:72.22:0,72,1232	0/1:5,0:5:2.14:2,0,17	0/0:27,0:15:22.61:0,23,282	0/0:22,0:12:25.33:0,25,314	0/1:30,0:30:39.57:40,0,246	0/1:21,0:21:76.10:76,0,80	1/1:14,0:14:6.71:195,7,0	1/1:17,0:17:51.12:1104,51,0	0/1:16,0:16:9.04:68,0,9	0/1:31,0:31:56.87:307,0,57	0/1:15,0:15:63.09:117,0,63	0/1:16,0:16:12.31:12,0,110	0/1:21,0:21:32.18:106,0,32	1/1:22,0:22:22.86:182,23,0	0/1:23,0:23:32.64:33,0,105	0/1:25,0:25:39.14:39,0,118	0/1:29,0:28:37.40:174,0,37	1/1:15,0:15:18.70:126,19,0	1/1:0,8:8:24.08:587,24,0	1/1:3,27:32:63.15:1519,63,0	1/1:2,16:19:33.07:799,33,0	0/1:17,0:17:13.91:58,0,14	0/1:31,0:31:80.49:179,0,80	0/1:18,0:18:27.83:118,0,28	0/0:46,0:45:99:0,132,2286	0/1:27,0:27:25.84:26,0,129	0/1:40,0:40:19.93:241,0,20	0/1:7,0:7:5.16:5,0,10
chr10	11958776	.	AAGAGAGGT	A	10086.57	PASS	AB=0.853;AC=24;AF=0.429;AN=56;BaseQRankSum=-7.136;DP=612;FS=1.095;HRun=0;HaplotypeScore=212.9860;InbreedingCoeff=-0.7464;MQ=57.68;MQ0=1;MQRankSum=-2.748;QD=20.21;ReadPosRankSum=-5.438;VQSLOD=2.5094;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:72.22:0,72,2203	0/1:5,0:5:23.34:75,0,23	0/0:24,0:13:32.08:0,32,709	0/0:19,0:11:30.43:0,30,554	0/1:24,4:28:99:679,0,244	0/1:18,3:21:72.91:621,0,73	0/1:6,8:14:17.35:352,0,17	0/1:16,3:19:99:457,0,394	0/1:13,3:16:99:309,0,117	0/1:25,6:31:99:559,0,243	0/1:14,2:16:65.90:422,0,66	0/1:9,7:16:92.85:255,0,93	0/1:14,7:21:99:320,0,157	0/1:12,9:21:69.33:493,0,69	0/1:22,2:24:99:220,0,202	0/1:14,10:24:99:352,0,118	0/1:24,3:26:99:795,0,102	0/1:13,3:16:17.38:342,0,17	0/1:9,0:9:99:107,0,433	0/1:32,0:32:99:324,0,785	0/1:19,0:19:38.21:38,0,526	0/1:15,4:19:93.37:690,0,93	0/1:20,12:32:99:574,0,178	0/1:15,3:18:73.85:298,0,74	0/0:45,0:44:99:0,135,4546	0/1:21,3:24:99:339,0,181	0/1:32,8:40:99:1314,0,125	0/1:7,0:7:72.03:151,0,72
chr10	11958784	.	T	TAGAA	22105.44	PASS	AB=1.000;AC=41;AF=0.732;AN=56;BaseQRankSum=3.847;DP=610;FS=0.371;HRun=0;HaplotypeScore=135.5871;InbreedingCoeff=0.8555;MQ=58.99;MQ0=1;MQRankSum=-6.119;QD=50.35;ReadPosRankSum=4.258;VQSLOD=5.8050;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:60.20:0,60,1050	1/1:2,5:7:9.03:234,9,0	0/0:23,0:15:38.44:0,38,556	0/0:19,0:11:1.42:0,1,203	1/1:8,20:30:75.05:1531,75,0	1/1:5,14:19:39.13:951,39,0	1/1:8,4:12:24.08:543,24,0	0/1:23,0:23:99:106,0,618	1/1:3,12:16:39.13:935,39,0	1/1:10,21:31:84.28:2030,84,0	1/1:6,11:18:30.06:688,30,0	1/1:12,5:17:29.97:555,30,0	1/1:10,10:20:44.93:1058,45,0	1/1:10,12:22:57.20:1360,57,0	1/1:7,15:22:36.12:884,36,0	1/1:14,9:23:48.06:1019,48,0	1/1:7,17:23:50.45:1269,50,0	1/1:4,9:13:33.09:782,33,0	0/0:11,0:11:33.10:0,33,546	0/0:30,0:30:56.44:0,56,838	0/0:17,0:17:33.11:0,33,533	1/1:5,13:18:48.16:1157,48,0	1/1:15,16:31:75.21:1744,75,0	1/1:8,10:19:32.83:729,33,0	0/0:43,0:42:99:0,120,2119	1/1:5,20:26:72.24:1729,72,0	1/1:9,30:41:99:2412,102,0	1/1:0,7:7:15.05:389,15,0
chr10	11959721	.	TTTTG	T	1849.08	PASS	AB=0.938;AC=9;AF=0.161;AN=56;BaseQRankSum=10.562;DP=558;FS=3.629;HRun=0;HaplotypeScore=97.5426;InbreedingCoeff=0.8537;MQ=59.21;MQ0=0;MQRankSum=-7.671;QD=20.78;ReadPosRankSum=-3.388;VQSLOD=2.7760;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:69.22:0,69,1653	0/0:14,0:14:36.12:0,36,814	0/0:11,0:11:29.92:0,30,480	0/0:16,0:16:39.61:0,40,883	0/0:22,0:22:57.20:0,57,1420	0/0:22,0:21:63.20:0,63,1468	0/0:12,0:12:30.10:0,30,748	1/1:9,24:33:72.18:1142,72,0	0/0:21,0:21:48.15:0,48,1151	0/0:31,0:31:90.31:0,90,2215	0/0:18,0:18:42.12:0,42,913	0/0:19,0:19:45.14:0,45,1070	0/0:12,0:12:36.12:0,36,872	0/0:22,0:22:57.20:0,57,1416	0/1:14,1:15:15.06:15,0,761	0/0:16,0:16:45.15:0,45,1101	0/0:47,0:47:99:0,111,2589	0/0:24,0:24:63.15:0,63,1408	1/1:5,9:14:23.95:372,24,0	1/1:3,9:12:26.82:364,27,0	1/1:6,9:15:9.03:116,9,0	0/0:12,0:12:33.10:0,33,752	0/0:16,0:16:42.12:0,42,924	0/0:24,0:24:66.20:0,66,1525	0/0:19,0:19:48.16:0,48,1148	0/0:21,0:21:51.18:0,51,1263	0/0:27,0:26:57.20:0,57,1366	0/0:13,0:13:33.11:0,33,826
chr10	11959942	.	CTTTATTAAAT	C	2970.38	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=10.199;DP=451;FS=75.919;HRun=0;HaplotypeScore=133.8691;InbreedingCoeff=0.9653;MQ=68.97;MQ0=2;MQRankSum=-5.137;QD=51.21;ReadPosRankSum=-3.705;VQSLOD=-0.0701;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:75.26:0,75,3631	0/0:14,0:14:42.14:0,42,2001	0/0:16,0:16:38.54:0,39,1468	0/0:11,0:11:30.10:0,30,1297	0/0:20,0:20:60.21:0,60,2758	0/0:25,0:24:66.22:0,66,3194	0/0:8,0:8:24.08:0,24,1246	1/1:3,23:26:69.13:1385,69,0	0/0:8,0:8:21.07:0,21,1112	0/0:13,0:13:39.13:0,39,2059	0/0:17,0:17:48.16:0,48,2063	0/0:19,0:18:51.17:0,51,2578	0/0:22,0:22:63.14:0,63,2830	0/0:26,0:26:66.23:0,66,2998	0/0:18,0:17:48.16:0,48,2512	0/0:11,0:11:21.02:0,21,844	0/0:22,0:22:54.18:0,54,2478	0/0:14,0:13:33.11:0,33,1483	1/1:0,16:16:47.96:803,48,0	1/1:0,10:10:24.08:799,24,0	1/1:1,5:6:6.02:137,6,0	0/0:12,0:12:36.12:0,36,1684	0/0:16,0:16:45.15:0,45,2178	0/0:19,0:19:39.09:0,39,1707	0/0:17,0:17:51.18:0,51,2715	0/0:18,0:18:51.17:0,51,2345	0/0:14,0:14:36.12:0,36,1787	0/0:7,0:7:21.07:0,21,984
chr10	11960026	.	CTTCTT	C	9623.74	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=2.318;DP=438;FS=16.046;HRun=0;HaplotypeScore=138.3590;InbreedingCoeff=0.9489;MQ=79.09;MQ0=7;MQRankSum=-4.976;QD=39.60;ReadPosRankSum=7.153;VQSLOD=3.6397;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:27:64.42:0,64,1756	1/1:1,9:10:12.04:248,12,0	0/0:33,0:24:39.22:0,39,1290	0/0:50,0:34:69.64:0,70,1447	1/1:4,14:18:18.06:372,18,0	0/0:20,0:20:47.95:0,48,1375	0/0:13,0:13:27.09:0,27,776	0/0:8,0:18:47.90:0,48,951	1/1:1,11:11:30.10:620,30,0	1/1:2,20:22:57.19:1177,57,0	1/1:1,18:19:33.11:658,33,0	1/1:3,5:7:15.05:310,15,0	1/1:1,13:14:36.12:744,36,0	1/1:3,12:15:30.10:596,30,0	1/1:1,11:11:27.09:536,27,0	1/1:0,11:11:27.09:558,27,0	1/1:5,11:16:21.54:434,22,0	1/1:3,6:6:18.06:373,18,0	0/0:5,0:5:15.05:0,15,301	0/0:1,0:7:18.06:0,18,349	0/0:1,0:2:3.01:0,3,36	1/1:3,12:14:21.07:420,21,0	1/1:1,12:13:18.06:372,18,0	1/1:2,10:12:12.04:248,12,0	0/0:17,0:17:51.05:0,51,1324	1/1:0,13:13:36.12:719,36,0	1/1:2,17:19:48.16:992,48,0	1/1:1,4:4:12.04:248,12,0
chr10	11960071	.	GTC	G	6766.17	PASS	AB=0.721;AC=44;AF=0.815;AN=54;BaseQRankSum=6.598;DP=409;FS=3.347;HRun=0;HaplotypeScore=234.8311;InbreedingCoeff=0.6242;MQ=55.79;MQ0=5;MQRankSum=-4.488;QD=25.34;ReadPosRankSum=1.171;VQSLOD=5.1159;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:25:42.14:0,42,720	1/1:1,5:6:15.05:205,15,0	0/0:41,0:19:38.38:0,38,517	0/0:47,0:22:33.21:0,33,517	1/1:3,18:21:27.04:364,27,0	1/1:15,3:18:28.67:181,29,0	1/1:8,2:10:15.04:101,15,0	1/1:2,0:2:2.84:14,3,0	1/1:1,16:17:36.12:485,36,0	1/1:5,16:21:48.16:644,48,0	1/1:1,14:15:28.44:394,28,0	1/1:1,7:8:24.08:327,24,0	1/1:4,12:16:39.13:520,39,0	1/1:2,11:13:33.10:432,33,0	1/1:2,13:15:39.13:531,39,0	1/1:3,11:14:30.10:410,30,0	0/1:5,3:8:43.24:102,0,43	0/1:6,4:10:98.50:178,0,99	1/1:1,1:1:3.01:39,3,0	1/1:4,0:4:2.49:9,2,0	./.	1/1:1,12:13:36.07:458,36,0	1/1:0,15:15:32.79:436,33,0	1/1:6,4:10:5.42:60,5,0	0/0:25,0:25:54.18:0,54,938	1/1:3,7:10:18.06:241,18,0	1/1:1,15:16:39.08:511,39,0	1/1:0,3:3:9.03:123,9,0
chr10	11960076	.	T	TTC	2028.59	PASS	AB=1.000;AC=38;AF=0.704;AN=54;BaseQRankSum=-0.076;DP=377;FS=16.537;HRun=0;HaplotypeScore=250.8044;InbreedingCoeff=0.3268;MQ=53.88;MQ0=5;MQRankSum=-2.476;QD=8.15;ReadPosRankSum=3.000;VQSLOD=1.8104;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:24:41.60:0,42,645	1/1:5,0:5:1.67:25,2,0	0/0:33,0:16:40.49:0,40,508	0/0:38,0:18:38.57:0,39,534	1/1:19,0:19:19.86:147,20,0	1/1:12,5:17:20.03:254,20,0	1/1:8,3:11:17.46:134,17,0	1/1:2,0:2:2.04:6,2,0	0/1:16,0:16:12.12:109,0,12	1/1:19,0:19:1.23:75,1,0	1/1:15,0:15:29.79:230,30,0	1/1:8,0:8:5.19:48,5,0	0/1:15,0:15:9.93:35,0,10	1/1:13,0:13:20.96:181,21,0	1/1:13,0:13:13.34:119,13,0	0/1:11,0:11:6.67:77,0,7	0/1:9,0:9:53.07:68,0,53	0/1:9,0:9:15.23:15,0,120	0/0:2,0:1:1.82:0,2,5	1/1:4,0:4:4.46:16,4,0	./.	1/1:13,0:13:23.66:186,24,0	1/1:15,0:15:31.05:244,31,0	1/1:10,0:10:4.81:27,5,0	0/0:27,0:27:54.18:0,54,880	0/1:7,0:7:2.99:36,0,3	1/1:15,0:15:7.28:113,7,0	1/1:3,0:3:8.42:52,8,0
chr10	11960079	.	TTC	T	987.73	PASS	AB=0.620;AC=38;AF=0.704;AN=54;BaseQRankSum=4.624;DP=370;FS=5.545;HRun=0;HaplotypeScore=253.8288;InbreedingCoeff=0.5685;MQ=54.32;MQ0=4;MQRankSum=-3.868;QD=4.29;ReadPosRankSum=5.143;VQSLOD=2.1254;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:24:64.54:0,65,1022	1/1:5,0:5:5.11:14,5,0	0/0:30,0:16:28.54:0,29,478	0/0:36,0:17:35.45:0,35,538	1/1:19,0:19:27.93:153,28,0	0/1:6,10:16:31.92:182,0,32	0/1:4,6:10:45.03:93,0,45	1/1:1,1:2:3.01:40,3,0	1/1:16,0:16:17.75:54,18,0	1/1:19,0:19:6.95:42,7,0	1/1:15,0:15:23.76:118,24,0	1/1:8,0:8:10.17:25,10,0	1/1:15,0:15:18.26:56,18,0	1/1:13,0:13:11.84:34,12,0	1/1:13,0:13:16.51:44,17,0	1/1:11,0:11:9.53:29,10,0	0/0:9,0:9:2.19:0,2,27	0/0:9,0:9:8.94:0,9,65	0/0:2,0:1:1.55:0,2,4	1/1:2,2:4:6.01:65,6,0	./.	1/1:13,0:13:19.92:64,20,0	1/1:15,0:15:23.81:87,24,0	1/1:11,0:11:4.32:12,4,0	0/0:27,0:27:75.25:0,75,1326	1/1:7,0:7:1.96:9,2,0	1/1:15,0:15:8.50:33,9,0	1/1:3,0:3:3.73:11,4,0
chr10	11960097	.	TC	T	6640.87	PASS	AB=0.571;AC=46;AF=0.885;AN=52;BaseQRankSum=-1.736;DP=281;FS=26.961;HRun=3;HaplotypeScore=213.9892;InbreedingCoeff=-0.1536;MQ=46.91;MQ0=3;MQRankSum=0.373;QD=23.63;ReadPosRankSum=1.804;VQSLOD=1.6386;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,18:18:52.21:578,52,0	1/1:0,5:5:15.04:173,15,0	1/1:9,2:5:6.78:48,7,0	0/1:10,4:9:29.48:47,0,29	0/1:1,14:15:11.57:244,0,12	1/1:1,14:15:42.06:472,42,0	1/1:0,12:10:30.02:336,30,0	./.	0/1:1,14:15:33.53:282,0,34	1/1:2,12:14:39.01:415,39,0	0/1:3,10:13:22.14:221,0,22	1/1:1,6:7:18.04:203,18,0	0/1:0,11:11:4.21:248,0,4	1/1:0,13:13:13.05:381,13,0	1/1:0,10:10:30.03:331,30,0	1/1:0,9:9:27:271,27,0	1/1:1,4:5:6.02:74,6,0	1/1:0,5:5:15.05:185,15,0	1/1:1,2:2:3.01:37,3,0	1/1:0,2:2:6.02:71,6,0	./.	1/1:1,7:8:21.01:227,21,0	0/1:2,12:14:9.87:280,0,10	1/1:3,5:8:5.99:58,6,0	1/1:2,25:27:75.03:848,75,0	1/1:0,8:8:20.09:213,20,0	1/1:1,10:11:27.01:288,27,0	1/1:0,3:3:9.03:111,9,0
chr10	11960108	.	CATA	C	1713.27	PASS	AB=0.973;AC=33;AF=0.660;AN=50;BaseQRankSum=2.827;DP=185;FS=5.776;HRun=0;HaplotypeScore=202.1222;InbreedingCoeff=0.0941;MQ=34.52;MQ0=2;MQRankSum=0.933;QD=9.63;ReadPosRankSum=1.884;VQSLOD=2.4594;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:15,1:14:34.30:34,0,64	1/1:5,0:5:14.73:96,15,0	0/0:1,0:1:2.74:0,3,12	0/1:1,0:1:0:0,0,0	0/1:9,0:9:2.58:3,0,55	1/1:6,6:11:25.42:121,25,0	1/1:10,2:10:21.16:80,21,0	./.	0/1:11,1:13:30.68:148,0,31	1/1:9,0:9:26.74:194,27,0	0/1:9,0:9:30.83:35,0,31	1/1:4,0:4:11.94:90,12,0	0/1:10,0:10:7.52:139,0,8	0/1:9,0:9:6.68:92,0,7	1/1:8,0:8:20.61:136,21,0	1/1:6,0:6:17.85:127,18,0	0/0:2,0:2:0.47:0,0,1	1/1:3,1:4:11.88:82,12,0	./.	0/0:2,0:2:1.82:0,2,5	./.	1/1:6,0:6:15.20:85,15,0	0/1:10,0:10:26.64:35,0,27	0/0:2,0:2:2.74:0,3,12	0/1:19,1:20:39.28:115,0,39	1/1:7,0:7:7.51:101,8,0	1/1:6,0:6:14.83:102,15,0	1/1:2,0:2:5.89:39,6,0
chr10	11960142	.	CCA	C	111.08	PASS	AB=0.884;AC=8;AF=0.148;AN=54;BaseQRankSum=-0.356;DP=263;FS=9.334;HRun=0;HaplotypeScore=210.2854;InbreedingCoeff=-0.0813;MQ=47.94;MQ0=4;MQRankSum=-0.220;QD=1.59;ReadPosRankSum=-2.534;VQSLOD=1.2896;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:17:42.14:0,42,795	0/1:5,1:6:27.19:27,0,98	0/0:6,1:4:6.02:0,6,111	0/1:23,0:13:20.37:20,0,334	0/0:15,0:15:31.59:0,32,428	0/0:16,0:15:44.82:0,45,756	0/0:18,0:15:39.70:0,40,629	0/0:3,0:2:5.86:0,6,37	0/0:13,0:13:20.84:0,21,371	0/0:14,0:14:33.77:0,34,543	0/0:6,0:6:9.50:0,10,163	0/0:10,0:10:5.79:0,6,156	0/0:12,0:11:30.12:0,30,353	0/0:9,0:9:15.31:0,15,217	0/1:9,1:10:53.08:53,0,155	0/0:4,0:4:11.21:0,11,83	0/0:5,1:6:5.52:0,6,68	0/0:4,0:4:12.04:0,12,183	0/0:2,0:2:0.99:0,1,16	0/0:2,0:2:2.96:0,3,22	./.	0/0:5,0:5:2.98:0,3,60	0/0:11,0:11:15.05:0,15,298	0/1:2,1:3:35:35,0,54	0/0:15,0:15:42.14:0,42,832	0/1:12,0:11:2.38:2,0,221	0/1:11,4:14:86.21:86,0,301	1/1:1,0:1:1.25:3,1,0
chr10	11960149	.	TG	T	6853.33	PASS	AB=0.814;AC=53;AF=0.981;AN=54;BaseQRankSum=0.408;DP=268;FS=1.421;HRun=1;HaplotypeScore=162.1727;InbreedingCoeff=-0.0664;MQ=49.74;MQ0=7;MQRankSum=-1.102;QD=25.67;ReadPosRankSum=2.318;VQSLOD=4.8702;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,17:16:33.20:543,33,0	1/1:0,6:6:14.87:158,15,0	1/1:8,4:5:5.81:83,6,0	0/1:27,8:16:85.44:233,0,85	1/1:1,15:16:12.26:316,12,0	1/1:0,14:13:34.87:499,35,0	1/1:0,16:13:33.11:459,33,0	1/1:2,1:2:5.97:60,6,0	1/1:0,11:11:33.09:441,33,0	1/1:1,13:14:39.08:515,39,0	1/1:0,7:7:8.57:123,9,0	1/1:0,9:9:23.29:288,23,0	1/1:0,12:11:32.73:395,33,0	1/1:0,8:8:17.86:227,18,0	1/1:0,9:10:27.04:313,27,0	1/1:0,4:4:12.04:167,12,0	1/1:1,5:6:5.78:83,6,0	1/1:0,4:4:9.03:125,9,0	1/1:1,1:2:5.05:47,5,0	1/1:0,2:2:3.01:42,3,0	./.	1/1:0,3:4:5.89:57,6,0	1/1:0,8:8:15.05:209,15,0	1/1:0,3:3:6.01:67,6,0	1/1:0,14:14:42.14:585,42,0	1/1:0,11:11:30.06:352,30,0	1/1:1,13:13:36.02:429,36,0	1/1:0,0:1:3.01:37,3,0
chr10	11960164	.	TTC	T	1358.61	PASS	AB=0.834;AC=18;AF=0.321;AN=56;BaseQRankSum=-4.971;DP=446;FS=25.915;HRun=0;HaplotypeScore=193.5203;InbreedingCoeff=-0.3179;MQ=42.87;MQ0=14;MQRankSum=-2.307;QD=5.68;ReadPosRankSum=-1.609;VQSLOD=1.6209;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:19:40.69:0,41,779	0/1:4,2:6:30.95:31,0,97	0/0:28,0:7:8.98:0,9,183	0/0:67,3:25:42.33:0,42,901	0/1:26,4:28:99:137,0,181	0/1:21,1:20:10.90:11,0,410	0/0:20,1:20:44.62:0,45,469	0/0:3,0:3:5.99:0,6,50	0/1:11,3:14:16.31:16,0,281	0/1:19,4:25:99:346,0,407	0/0:13,2:14:6.40:0,6,40	0/1:10,1:10:3.20:3,0,61	0/0:13,2:14:18.73:0,19,230	0/1:8,1:9:15.13:15,0,101	0/1:14,2:19:99:137,0,132	0/0:7,3:10:12.03:0,12,149	0/1:11,1:13:39.30:48,0,39	0/1:2,5:7:36.68:143,0,37	0/0:2,0:1:0:0,0,0	0/0:2,0:2:3.01:0,3,33	1/1:4,0:4:2.74:12,3,0	0/1:7,3:9:34.40:34,0,46	0/1:7,3:10:9.19:9,0,82	0/1:5,1:6:30.37:32,0,30	0/0:18,0:18:33.11:0,33,642	0/1:17,1:18:99:136,0,254	0/1:17,8:24:99:233,0,227	0/1:4,3:7:2.38:166,0,2
chr10	11960170	.	C	CTCTCT	3451.81	PASS	AB=0.940;AC=33;AF=0.589;AN=56;BaseQRankSum=1.188;DP=474;FS=0.538;HRun=0;HaplotypeScore=184.3866;InbreedingCoeff=0.4678;MQ=44.29;MQ0=14;MQRankSum=-1.623;QD=11.47;ReadPosRankSum=2.132;VQSLOD=3.0150;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:17:34.41:0,34,814	1/1:10,0:10:5.37:89,5,0	0/0:34,0:9:12.56:0,13,180	0/0:79,0:27:63.85:0,64,818	1/1:28,0:28:9.09:261,9,0	1/1:12,3:19:27.84:484,28,0	0/1:17,2:19:28.75:96,0,29	0/0:3,0:3:5.97:0,6,69	1/1:12,0:11:8.80:54,9,0	1/1:26,0:26:25.08:455,25,0	1/1:18,0:16:0.47:1,0,0	1/1:10,0:11:11.62:266,12,0	0/1:13,0:12:40.71:59,0,41	0/1:11,0:10:11.71:26,0,12	1/1:19,0:20:18.01:314,18,0	0/0:9,0:9:0.42:0,0,1	0/1:12,0:13:15.93:113,0,16	0/1:8,0:9:1.03:123,0,1	0/0:7,0:5:11.36:0,11,60	0/0:3,0:3:5.75:0,6,79	0/0:4,0:4:7.32:0,7,44	1/1:11,0:10:8.89:80,9,0	1/1:15,0:14:5.26:34,5,0	1/1:8,0:8:6:91,6,0	0/0:12,0:12:30.10:0,30,659	1/1:19,0:19:4.99:326,5,0	1/1:23,0:23:11.59:479,12,0	1/1:8,0:8:14.63:101,15,0
chr10	11960193	.	CTTTCTTTTCTT	C	1293.39	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=2.512;DP=541;FS=47.065;HRun=0;HaplotypeScore=207.5139;InbreedingCoeff=0.9661;MQ=50.53;MQ0=20;MQRankSum=-1.343;QD=44.60;ReadPosRankSum=-1.364;VQSLOD=1.5842;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:35.74:0,36,1943	0/0:14,0:14:27.09:0,27,1275	0/0:40,0:12:20.53:0,21,594	0/0:85,0:29:28.37:0,28,703	0/0:31,0:29:49.77:0,50,2277	0/0:22,0:20:25.20:0,25,1539	0/0:22,0:21:22.71:0,23,1321	1/1:3,7:10:22.30:494,22,0	0/0:18,0:17:45.15:0,45,1694	0/0:31,0:31:26.85:0,27,2775	0/0:19,0:18:39.60:0,40,1546	0/0:11,0:10:18.06:0,18,493	0/0:12,0:12:29.88:0,30,1041	0/0:11,0:10:23.95:0,24,880	0/0:22,0:22:56.86:0,57,2352	0/0:15,0:15:36.59:0,37,1581	0/0:16,0:16:33.63:0,34,1494	0/0:12,0:12:25.64:0,26,1012	1/1:4,7:8:21.03:480,21,0	1/1:2,1:3:9.03:212,9,0	1/1:5,0:5:15.05:262,15,0	0/0:15,0:14:21.85:0,22,1013	0/0:17,0:16:36.12:0,36,1527	0/0:11,0:11:24.08:0,24,1002	0/0:12,0:12:33.10:0,33,1382	0/0:20,0:19:28.60:0,29,1924	0/0:27,0:26:60.20:0,60,2376	0/0:7,0:7:17.95:0,18,671
chr10	11961347	.	C	CA	3571.08	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-11.851;DP=650;FS=12.100;HRun=3;HaplotypeScore=60.5503;InbreedingCoeff=0.9952;MQ=91.48;MQ0=0;MQRankSum=-2.086;QD=37.20;ReadPosRankSum=-2.417;VQSLOD=2.2642;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,114,1366	0/0:6,0:6:15.05:0,15,180	0/0:33,0:33:89.98:0,90,1033	0/0:23,0:23:60.15:0,60,694	0/0:31,0:31:90.26:0,90,1067	0/0:30,0:30:90.28:0,90,1080	0/0:16,0:16:45.14:0,45,540	1/1:5,25:30:75.25:1051,75,0	0/0:19,0:19:54.15:0,54,636	0/0:31,0:31:93.29:0,93,1116	0/0:19,0:19:57.16:0,57,672	0/0:20,0:20:57.16:0,57,672	0/0:27,0:27:75.21:0,75,888	0/0:21,0:21:57.17:0,57,684	0/0:21,0:21:60.18:0,60,719	0/0:22,0:21:63.18:0,63,746	0/0:20,0:20:54.17:0,54,647	0/0:19,0:19:57.17:0,57,684	1/1:1,19:20:57.19:798,57,0	1/1:0,28:28:84.28:1176,84,0	1/1:2,16:18:39.13:546,39,0	0/0:18,0:18:48.15:0,48,575	0/0:26,0:26:72.22:0,72,862	0/0:35,0:35:99:0,102,1196	0/0:10,0:10:27.07:0,27,314	0/0:26,0:26:72.19:0,72,841	0/0:29,0:28:87.25:0,87,1031	0/0:11,0:11:33.10:0,33,394
chr10	11961803	.	C	CTTT	1568.43	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=9.162;DP=419;FS=0.674;HRun=8;HaplotypeScore=64.0478;InbreedingCoeff=0.9507;MQ=64.23;MQ0=2;MQRankSum=-7.725;QD=29.04;ReadPosRankSum=-3.713;VQSLOD=1.1190;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:72.21:0,72,927	0/0:4,0:4:12.04:0,12,158	0/0:8,0:6:15.05:0,15,193	0/0:8,0:6:11.40:0,11,119	0/0:23,0:23:57.14:0,57,749	0/0:18,0:18:48.15:0,48,630	0/0:7,0:7:18.04:0,18,236	1/1:12,5:17:21.07:390,21,0	0/0:11,0:11:30.07:0,30,365	0/0:20,0:20:54.16:0,54,709	0/0:16,0:16:42.12:0,42,551	0/0:8,0:8:21.07:0,21,275	0/0:13,0:13:39.13:0,39,513	0/0:16,0:16:39.11:0,39,511	0/0:13,0:13:36.07:0,36,427	0/0:9,0:9:24.08:0,24,315	0/0:25,0:24:26.91:0,27,744	0/0:17,0:17:30.84:0,31,538	1/1:7,9:15:30.10:526,30,0	1/1:6,8:16:31.78:550,32,0	1/1:0,5:5:15.01:261,15,0	0/0:4,0:4:9.03:0,9,118	0/0:20,0:19:51.16:0,51,670	0/0:8,0:8:21.07:0,21,276	0/0:30,0:30:75.68:0,76,986	0/0:20,0:20:57.17:0,57,723	0/0:21,0:21:60.17:0,60,772	0/0:20,0:20:42.10:0,42,552
chr10	11962196	.	C	CGTGT	4379.96	PASS	AB=0.903;AC=45;AF=0.833;AN=54;BaseQRankSum=-1.549;DP=646;FS=0.000;HRun=0;HaplotypeScore=137.6407;InbreedingCoeff=0.2599;MQ=67.65;MQ0=5;MQRankSum=-2.329;QD=7.29;ReadPosRankSum=-1.509;VQSLOD=3.2089;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:22:14.76:0,15,191	./.	1/1:30,0:15:1.25:3,1,0	0/1:25,0:16:0:0,0,0	1/1:17,0:17:6.02:93,6,0	1/1:14,0:14:6.02:98,6,0	1/1:22,1:34:9.02:135,9,0	1/1:20,0:20:2.90:16,3,0	1/1:14,11:29:11.60:283,12,0	1/1:23,6:30:26.52:374,27,0	1/1:10,0:10:3.01:49,3,0	1/1:17,11:31:15.05:317,15,0	1/1:10,5:17:5.99:139,6,0	1/1:11,8:20:2.62:70,3,0	1/1:7,11:24:20.81:437,21,0	1/1:11,10:24:18.13:368,18,0	1/1:16,1:24:11.24:107,11,0	1/1:9,11:22:18.06:425,18,0	1/1:16,0:15:3.01:41,3,0	0/1:9,0:14:6.69:7,0,41	0/1:45,0:65:61.38:61,0,122	0/1:26,0:26:3.93:214,0,4	1/1:11,5:17:6.02:142,6,0	1/1:12,12:29:17.26:248,17,0	0/0:16,0:16:24.07:0,24,342	1/1:29,0:29:4.10:335,4,0	0/1:17,0:17:22.78:262,0,23	1/1:10,0:14:9.24:154,9,0
chr10	11962595	.	TG	T	4263.81	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=14.174;DP=744;FS=1.650;HRun=3;HaplotypeScore=78.0060;InbreedingCoeff=0.9988;MQ=85.20;MQ0=1;MQRankSum=-2.476;QD=34.39;ReadPosRankSum=-3.504;VQSLOD=3.8321;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:63,0:63:99:0,190,2681	0/0:11,0:11:33.11:0,33,473	0/0:27,0:28:77.83:0,78,1063	0/0:22,0:22:52.87:0,53,842	0/0:18,0:18:54.18:0,54,778	0/0:25,0:25:72.24:0,72,1036	0/0:24,0:24:72.24:0,72,1037	1/1:2,45:47:99:1660,135,0	0/0:36,0:36:99:0,102,1451	0/0:23,0:23:66.22:0,66,950	0/0:20,0:20:57.19:0,57,819	0/0:31,0:31:87.28:0,87,1232	0/0:20,0:20:60.19:0,60,847	0/0:27,0:27:75.25:0,75,1074	0/0:26,0:26:78.25:0,78,1105	0/0:25,0:25:75.25:0,75,1080	0/0:34,0:34:99:0,102,1465	0/0:8,0:7:21.07:0,21,302	1/1:1,18:19:54.17:670,54,0	1/1:1,19:20:54.17:669,54,0	1/1:2,36:38:99:1265,102,0	0/0:27,0:27:81.26:0,81,1146	0/0:18,0:18:51.17:0,51,734	0/0:33,0:33:96.31:0,96,1363	0/0:23,0:23:66.22:0,66,950	0/0:31,0:31:84.28:0,84,1209	0/0:33,0:33:90.25:0,90,1237	0/0:14,0:14:42.14:0,42,605
chr10	11962755	.	A	AT	3519.24	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-11.566;DP=675;FS=4.515;HRun=5;HaplotypeScore=62.0531;InbreedingCoeff=0.9911;MQ=77.85;MQ0=0;MQRankSum=0.018;QD=31.99;ReadPosRankSum=-2.075;VQSLOD=3.5462;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,120,1289	0/0:5,0:5:15.04:0,15,161	0/0:18,0:18:39.10:0,39,418	0/0:21,0:21:39.06:0,39,407	0/0:34,0:34:95.93:0,96,1030	0/0:24,0:24:72.18:0,72,774	0/0:25,0:25:69.16:0,69,733	1/1:4,29:34:90.27:1150,90,0	0/0:32,0:32:87.22:0,87,935	0/0:30,0:30:90.23:0,90,967	0/0:20,0:20:54.12:0,54,572	0/0:23,0:23:66.17:0,66,709	0/0:25,0:25:72.18:0,72,774	0/0:24,0:24:66.17:0,66,709	0/0:27,0:27:78.16:0,78,827	0/0:30,0:30:78.15:0,78,821	0/0:22,0:22:63.16:0,63,677	0/0:15,0:15:42.06:0,42,436	1/1:4,16:20:48.16:632,48,0	1/1:1,30:31:81.18:1027,81,0	1/1:1,24:25:54.18:711,54,0	0/0:13,0:13:36.09:0,36,387	0/0:24,0:24:63.16:0,63,677	0/0:25,0:25:72.12:0,72,751	0/0:21,0:21:60.15:0,60,645	0/0:29,0:29:84.20:0,84,896	0/0:30,0:29:75.18:0,75,806	0/0:5,0:5:15.04:0,15,161
chr10	11963322	.	C	CAG	4090.17	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=13.571;DP=708;FS=0.916;HRun=0;HaplotypeScore=96.8941;InbreedingCoeff=0.9838;MQ=72.49;MQ0=0;MQRankSum=-6.966;QD=38.23;ReadPosRankSum=-0.622;VQSLOD=5.2166;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,144,1906	0/0:18,0:18:48.12:0,48,613	0/0:29,0:29:60.22:0,60,951	0/0:28,0:28:66.16:0,66,822	0/0:33,0:33:96.29:0,96,1265	0/0:28,0:28:75.25:0,75,1012	0/0:14,0:14:36.12:0,36,487	1/1:3,21:25:72.19:1201,72,0	0/0:27,0:27:75.25:0,75,1014	0/0:28,0:28:69.18:0,69,899	0/0:16,0:16:45.15:0,45,607	0/0:26,0:26:72.23:0,72,958	0/0:18,0:18:48.16:0,48,649	0/0:25,0:25:72.24:0,72,974	0/0:29,0:29:75.25:0,75,1014	0/0:28,0:28:81.27:0,81,1095	0/0:22,0:22:57.16:0,57,752	0/0:19,0:19:51.08:0,51,649	1/1:4,10:14:30.10:525,30,0	1/1:7,28:35:72.25:1261,72,0	1/1:6,26:33:63.06:1103,63,0	0/0:15,0:15:39.13:0,39,526	0/0:22,0:22:60.19:0,60,796	0/0:29,0:29:81.27:0,81,1095	0/0:29,0:29:84.27:0,84,1121	0/0:35,0:35:96.32:0,96,1297	0/0:27,0:26:75.21:0,75,980	0/0:5,0:5:9.03:0,9,122
chr10	11963839	.	A	AGG	4608.12	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=14.061;DP=608;FS=1.420;HRun=0;HaplotypeScore=80.0728;InbreedingCoeff=0.8470;MQ=69.13;MQ0=0;MQRankSum=-2.118;QD=48.00;ReadPosRankSum=-1.258;VQSLOD=5.0764;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,99,1605	0/0:11,0:11:33.11:0,33,538	0/1:9,0:9:37.39:37,0,47	0/0:5,0:6:8.94:0,9,115	0/0:28,0:28:84.24:0,84,1277	0/0:31,0:31:93.21:0,93,1411	0/0:18,0:18:54.18:0,54,856	1/1:0,20:20:60.21:1177,60,0	0/0:27,0:27:81.25:0,81,1275	0/0:28,0:28:81.27:0,81,1301	0/0:28,0:28:84.29:0,84,1361	0/0:22,0:22:66.23:0,66,1071	0/0:14,0:14:39.12:0,39,609	0/0:29,0:29:87.28:0,87,1390	0/0:20,0:20:60.15:0,60,927	0/0:24,0:24:72.25:0,72,1167	0/0:21,0:21:63.22:0,63,1028	0/0:4,0:4:12.04:0,12,196	1/1:0,14:15:45.13:818,45,0	1/1:0,31:31:81.07:1454,81,0	1/1:0,21:21:56.26:1122,56,0	0/0:21,0:21:63.22:0,63,1028	0/0:24,0:24:72.25:0,72,1175	0/0:17,0:17:48.15:0,48,753	0/0:28,0:28:84.27:0,84,1317	0/0:27,0:27:81.28:0,81,1322	0/0:37,0:37:99:0,111,1758	0/0:10,0:10:30.04:0,30,392
chr10	11964888	.	CT	C	2089.13	PASS	AB=0.857;AC=8;AF=0.154;AN=52;BaseQRankSum=8.752;DP=1399;DS;FS=1.632;HRun=1;HaplotypeScore=55.9543;InbreedingCoeff=0.0328;MQ=20.24;MQ0=869;MQRankSum=-4.534;QD=3.76;ReadPosRankSum=-1.424;VQSLOD=-0.1949;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:128,5:34:83.56:84,0,829	0/0:14,0:10:27.09:0,27,430	0/0:24,0:3:9.03:0,9,143	0/0:12,0:2:6.02:0,6,96	0/1:37,26:45:99:914,0,728	0/0:47,0:16:48.16:0,48,763	0/0:33,0:13:35.91:0,36,539	1/1:17,16:2:6.02:84,6,0	0/0:80,0:14:39.13:0,39,621	0/0:43,0:19:57.19:0,57,911	0/0:36,0:19:48.16:0,48,764	0/0:51,0:10:30.10:0,30,478	0/0:42,0:11:30.10:0,30,476	0/0:73,0:14:33.11:0,33,525	0/1:115,19:39:99:435,0,991	0/1:60,6:13:99:128,0,391	0/1:86,15:37:99:365,0,775	0/0:54,0:13:32.92:0,33,416	./.	./.	0/0:42,0:6:2.98:0,3,22	0/0:43,0:18:51.17:0,51,809	0/0:28,0:23:57.19:0,57,908	0/0:44,0:11:30.10:0,30,479	0/0:24,0:16:48.16:0,48,765	0/0:65,0:20:60.20:0,60,959	0/0:33,0:18:45.15:0,45,717	0/1:19,6:19:99:212,0,473
chr10	11972863	.	A	AAC	1212.40	PASS	AB=0.950;AC=40;AF=0.833;AN=48;BaseQRankSum=-2.382;DP=606;FS=1.473;HRun=0;HaplotypeScore=151.7931;InbreedingCoeff=0.3361;MQ=65.82;MQ0=11;MQRankSum=0.053;QD=2.55;ReadPosRankSum=-0.323;VQSLOD=2.8274;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:31,5:39:24.57:38,0,25	1/1:7,0:7:5.92:39,6,0	./.	./.	1/1:16,0:14:5.95:42,6,0	./.	1/1:24,0:24:2.98:22,3,0	./.	1/1:18,0:18:7.37:39,7,0	1/1:27,0:26:10.58:103,11,0	0/1:12,0:11:0:0,0,0	1/1:19,0:19:9.76:59,10,0	1/1:7,0:7:8.79:72,9,0	1/1:27,0:26:9.92:87,10,0	1/1:18,0:18:6.59:32,7,0	1/1:17,0:15:12.08:76,12,0	1/1:29,0:28:8.63:54,9,0	1/1:23,0:22:19.41:121,19,0	0/0:18,0:16:3.01:0,3,30	0/0:21,0:21:8.97:0,9,84	0/1:59,0:54:0:0,0,0	1/1:15,0:15:8.40:44,8,0	1/1:12,0:10:8.63:53,9,0	1/1:34,0:32:20.53:138,21,0	0/1:15,0:15:8.08:35,0,8	1/1:24,0:21:17.18:108,17,0	1/1:19,0:18:11.90:85,12,0	1/1:11,0:11:11.83:85,12,0
chr10	11972880	.	ACACACACACACACACACACACACACACACATG	A	1283.19	PASS	AB=1.000;AC=8;AF=0.143;AN=56;BaseQRankSum=3.723;DP=632;FS=43.146;HRun=0;HaplotypeScore=345.5793;InbreedingCoeff=0.5921;MQ=42.09;MQ0=42;MQRankSum=-2.067;QD=7.50;ReadPosRankSum=-3.172;VQSLOD=0.4666;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:40:45.06:0,45,1715	0/0:7,0:7:14.92:0,15,514	0/0:15,0:8:14.96:0,15,138	0/0:19,0:16:39:0,39,633	0/0:17,0:13:9.03:0,9,349	0/0:8,0:7:3.01:0,3,41	0/1:35,0:33:2.77:3,0,94	1/1:7,30:33:74.84:1057,75,0	0/0:21,0:19:19.46:0,19,209	0/0:32,0:30:70.76:0,71,2026	0/0:12,0:10:2.22:0,2,8	0/0:23,0:23:24.32:0,24,512	0/0:11,0:11:21.51:0,22,403	0/0:25,0:24:20.96:0,21,685	0/0:14,0:14:12.08:0,12,282	0/0:20,0:18:21.51:0,22,443	0/0:27,0:25:32.92:0,33,807	0/0:20,0:19:34.56:0,35,853	1/1:14,0:10:8.86:130,9,0	0/1:25,0:25:99:111,0,301	1/1:60,0:48:8.61:120,9,0	0/0:20,0:19:12.04:0,12,517	0/0:17,0:15:9.03:0,9,468	0/0:31,0:28:42.07:0,42,1443	0/0:17,0:15:33.11:0,33,2467	0/0:30,0:26:41.14:0,41,1812	0/0:18,0:17:23.74:0,24,662	0/0:12,0:9:27.02:0,27,1094
chr10	11972896	.	A	ATG	417.87	PASS	AB=0.986;AC=11;AF=0.204;AN=54;BaseQRankSum=2.849;DP=603;FS=7.615;HRun=0;HaplotypeScore=161.7887;InbreedingCoeff=0.2203;MQ=38.43;MQ0=44;MQRankSum=-2.602;QD=1.78;ReadPosRankSum=-2.171;VQSLOD=1.6372;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:39:46.97:0,47,685	0/0:8,0:8:7.80:0,8,52	./.	0/0:10,0:7:21.05:0,21,294	0/0:16,0:13:8.99:0,9,84	1/1:9,2:10:3.22:13,3,0	0/1:35,2:33:84.79:86,0,85	0/1:35,0:31:2:304,0,2	0/1:21,1:19:14.29:14,0,90	0/0:28,0:26:11.74:0,12,345	0/1:14,0:12:0:0,0,0	0/0:25,0:24:15.82:0,16,168	0/0:10,0:10:8.97:0,9,60	0/0:22,0:21:8.31:0,8,110	0/0:19,0:18:11.98:0,12,139	0/0:23,0:20:14.98:0,15,118	0/0:25,0:23:17.87:0,18,212	0/0:19,0:16:24.67:0,25,193	0/1:8,0:6:0.50:1,0,33	1/1:20,0:20:7.44:32,7,0	0/1:59,0:47:21.30:46,0,21	0/0:21,0:20:11.92:0,12,88	0/0:19,0:18:8.98:0,9,72	0/0:28,0:23:29.90:0,30,255	0/0:19,0:16:38.58:0,39,516	0/1:29,0:24:55.49:55,0,164	0/0:18,0:16:13.05:0,13,110	0/0:11,0:8:5.91:0,6,76
chr10	11972898	.	A	ACATG	6786.28	PASS	AB=0.924;AC=41;AF=0.759;AN=54;BaseQRankSum=2.218;DP=639;FS=2.220;HRun=0;HaplotypeScore=161.5215;InbreedingCoeff=0.3967;MQ=37.70;MQ0=47;MQRankSum=-1.474;QD=13.03;ReadPosRankSum=2.349;VQSLOD=4.6537;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:39:43.96:0,44,651	1/1:5,1:8:9.02:141,9,0	./.	0/0:12,0:6:9.02:0,9,111	1/1:14,3:14:5.91:164,6,0	1/1:11,0:10:2.29:6,2,0	0/0:38,0:34:6.09:0,6,75	1/1:38,0:34:2.18:125,2,0	0/1:19,3:19:16.71:131,0,17	1/1:24,3:28:12.26:909,12,0	1/1:10,3:13:1.10:4,1,0	1/1:22,0:23:17.77:279,18,0	1/1:6,1:10:18.04:283,18,0	1/1:12,5:21:22.77:417,23,0	1/1:13,6:19:5.32:144,5,0	1/1:20,4:22:21.17:396,21,0	0/1:17,4:23:68.55:277,0,69	1/1:16,2:17:31.66:648,32,0	0/1:11,0:9:11:11,0,16	0/1:23,0:23:1.48:35,0,1	0/1:62,0:51:4.86:39,0,5	1/1:16,3:23:12.03:220,12,0	1/1:5,10:18:9.02:192,9,0	1/1:18,7:25:27.09:650,27,0	0/0:19,0:16:38.16:0,38,545	1/1:26,2:25:50.49:847,50,0	1/1:5,11:16:18.53:404,19,0	1/1:7,4:8:24:462,24,0
chr10	11972900	.	A	ATG	1680.77	PASS	AB=0.988;AC=25;AF=0.463;AN=54;BaseQRankSum=-0.787;DP=636;FS=5.767;HRun=0;HaplotypeScore=169.1184;InbreedingCoeff=0.0519;MQ=37.05;MQ0=50;MQRankSum=2.600;QD=4.52;ReadPosRankSum=3.613;VQSLOD=2.1610;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:37:43.96:0,44,643	0/1:8,0:8:22.57:23,0,32	./.	0/0:11,0:3:9.03:0,9,133	1/1:15,1:14:5.91:63,6,0	0/0:11,0:10:3.01:0,3,35	0/0:39,0:34:14.86:0,15,154	0/0:41,0:36:37.48:0,37,277	0/1:21,1:19:23.52:43,0,24	0/1:31,0:28:99:134,0,209	1/1:13,1:12:1.10:4,1,0	0/1:23,1:23:13.78:74,0,14	0/1:10,0:10:35.50:36,0,36	1/1:24,0:22:17.21:196,17,0	1/1:20,0:18:6.15:60,6,0	1/1:27,0:22:4.61:150,5,0	0/1:26,0:24:55.15:55,0,94	0/1:21,1:19:31.47:185,0,31	0/0:14,0:11:13.82:0,14,137	0/0:23,0:23:12.30:0,12,145	0/0:61,0:49:8.37:0,8,72	0/1:24,0:23:11.30:80,0,11	0/1:17,0:16:13.90:54,0,14	1/1:29,0:24:26.66:295,27,0	0/0:19,0:16:38.61:0,39,534	0/1:31,0:25:99:145,0,109	1/1:16,0:13:7.65:152,8,0	0/1:11,0:7:13.59:105,0,14
chr10	11972910	.	ATG	A	1340.68	PASS	AB=0.925;AC=19;AF=0.352;AN=54;BaseQRankSum=0.260;DP=656;FS=12.565;HRun=0;HaplotypeScore=161.1714;InbreedingCoeff=-0.1690;MQ=36.50;MQ0=55;MQRankSum=-4.358;QD=3.04;ReadPosRankSum=-5.052;VQSLOD=0.0910;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:32:42.14:0,42,692	0/0:7,2:9:6.54:0,7,52	./.	0/0:24,0:4:12.04:0,12,220	0/0:15,0:13:5.56:0,6,34	0/0:8,3:10:2.80:0,3,13	0/1:30,7:32:28.05:85,0,28	1/1:49,0:41:34.30:428,34,0	0/1:22,1:20:19.68:45,0,20	0/1:28,4:29:99:157,0,100	1/1:12,1:11:0.47:2,0,0	0/1:19,3:21:28.73:113,0,29	0/1:9,1:10:4.93:47,0,5	0/1:21,2:21:43.67:93,0,44	0/1:18,2:18:16.96:43,0,17	0/1:25,3:22:40.12:47,0,40	0/1:30,1:29:65.32:76,0,65	0/1:24,1:22:70.08:70,0,87	0/1:16,1:14:19.51:52,0,20	0/0:19,0:19:4.97:0,5,22	1/1:50,8:45:3.18:15,3,0	0/0:23,1:23:8.94:0,9,65	0/0:16,0:15:8.95:0,9,66	0/0:28,1:23:22.92:0,23,162	0/1:21,0:18:18.73:19,0,651	0/1:30,2:27:8.20:203,0,8	0/0:14,1:12:10.85:0,11,85	0/0:11,0:7:15.34:0,15,106
chr10	11972941	.	C	CATACACAT	2404.69	PASS	AB=1.000;AC=18;AF=0.333;AN=54;BaseQRankSum=3.867;DP=601;FS=8.657;HRun=0;HaplotypeScore=172.5485;InbreedingCoeff=-0.0896;MQ=39.84;MQ0=28;MQRankSum=-8.441;QD=7.99;ReadPosRankSum=3.536;VQSLOD=1.2498;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:29:54.18:0,54,1464	0/1:9,0:9:69.77:70,0,163	0/0:15,0:5:14.93:0,15,171	0/0:40,0:12:23.26:0,23,296	./.	1/1:9,0:12:2.88:16,3,0	0/0:23,0:21:7.96:0,8,205	0/1:43,0:35:99:566,0,689	1/1:20,0:16:15.05:273,15,0	0/1:30,0:27:99:329,0,473	0/1:12,0:11:0:0,0,0	0/1:22,0:20:86:123,0,86	0/1:9,0:9:63.89:77,0,64	0/1:22,0:20:99:137,0,109	0/0:16,0:12:3.41:0,3,19	1/1:23,0:17:6.43:114,6,0	0/1:28,0:27:99:235,0,174	0/1:23,0:22:99:217,0,134	0/0:13,0:10:14.96:0,15,192	0/0:17,0:16:8.34:0,8,195	0/0:45,4:42:4.26:0,4,42	0/0:21,0:21:6.01:0,6,107	0/0:16,0:15:3.90:0,4,83	0/0:25,0:21:8.95:0,9,214	0/0:19,0:19:42.14:0,42,1145	0/1:25,0:23:99:287,0,515	0/1:13,0:10:66.91:67,0,110	0/1:10,0:10:49.52:50,0,124
chr10	11972943	.	TAC	T	204.10	PASS	AB=0.980;AC=10;AF=0.185;AN=54;BaseQRankSum=1.978;DP=584;FS=19.849;HRun=0;HaplotypeScore=140.0310;InbreedingCoeff=-0.1024;MQ=40.38;MQ0=26;MQRankSum=-3.785;QD=1.03;ReadPosRankSum=-3.190;VQSLOD=0.1587;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:29:54.18:0,54,935	0/0:9,0:9:1.23:0,1,166	0/0:16,0:6:17.93:0,18,236	0/0:40,1:14:24.07:0,24,422	./.	1/1:12,0:12:1.90:6,2,0	0/0:19,0:16:6.10:0,6,105	0/1:38,4:34:73.62:74,0,418	0/0:20,0:16:8:0,8,114	0/1:28,1:26:22.43:22,0,489	0/0:11,0:10:1.02:0,1,4	0/1:21,1:20:53.83:54,0,94	0/1:7,0:7:13.84:14,0,69	0/1:20,0:18:20.09:20,0,126	0/0:14,0:11:5.37:0,5,24	0/0:23,0:17:7.46:0,7,50	0/1:27,0:27:0.89:1,0,215	0/0:22,1:22:18.96:0,19,197	0/0:12,0:9:8.24:0,8,103	0/0:16,0:15:9.49:0,9,151	0/0:42,5:40:3.01:0,3,52	0/0:22,0:22:11.11:0,11,86	0/0:12,2:14:5.69:0,6,63	0/0:22,0:19:11.07:0,11,162	0/0:19,0:19:42.14:0,42,724	0/1:25,0:23:0.62:1,0,543	0/1:13,0:10:99:134,0,137	0/0:11,0:11:17.79:0,18,209
chr10	11972945	.	C	CACACACAT	5168.94	PASS	AB=1.000;AC=22;AF=0.407;AN=54;BaseQRankSum=0.359;DP=594;FS=12.325;HRun=0;HaplotypeScore=155.9204;InbreedingCoeff=0.1479;MQ=42.03;MQ0=26;MQRankSum=-6.809;QD=15.86;ReadPosRankSum=2.807;VQSLOD=3.4130;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:28:54.17:0,54,1405	0/1:9,0:9:49.88:182,0,50	0/0:20,0:10:23.94:0,24,326	0/0:44,0:16:17.25:0,17,347	./.	1/1:9,4:14:0.89:2,1,0	0/0:20,0:16:8.14:0,8,66	0/1:42,0:34:26.99:27,0,386	1/1:20,0:16:15.05:545,15,0	0/1:30,0:27:43.42:958,0,43	0/1:11,0:10:0:0,0,0	0/1:22,0:20:9.95:336,0,10	0/1:7,0:7:10.97:184,0,11	1/1:21,0:19:11.69:321,12,0	0/0:14,0:11:0.06:0,0,0	1/1:24,0:18:6.43:217,6,0	0/1:28,0:27:15.20:430,0,15	0/1:24,0:23:2:482,0,2	0/0:11,0:8:9:0,9,136	0/0:16,0:15:5.30:0,5,47	0/0:46,0:39:3:0,3,25	0/0:22,0:22:3:0,3,25	0/0:14,0:14:3.88:0,4,27	0/1:24,0:20:14:14,0,40	0/0:19,0:19:42.13:0,42,1081	0/1:26,0:24:99:868,0,105	1/1:13,0:10:21.07:421,21,0	1/1:11,0:11:6.02:182,6,0
chr10	11972946	.	A	ACACACATG	6674.38	PASS	AB=0.681;AC=31;AF=0.574;AN=54;BaseQRankSum=-2.419;DP=616;FS=11.600;HRun=0;HaplotypeScore=157.8843;InbreedingCoeff=0.6172;MQ=42.65;MQ0=24;MQRankSum=-5.568;QD=18.09;ReadPosRankSum=1.422;VQSLOD=3.0762;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:28:51.17:0,51,1313	1/1:2,7:9:6.02:233,6,0	0/0:19,0:10:24.08:0,24,453	0/0:40,0:16:33.02:0,33,521	./.	0/1:11,3:14:0:0,0,0	0/1:16,4:16:0:1,0,0	0/0:41,0:33:20.91:0,21,276	1/1:5,15:17:14.94:632,15,0	1/1:15,15:28:39.59:1280,40,0	0/1:3,9:13:0:0,0,0	1/1:6,14:21:12.04:425,12,0	1/1:3,3:7:6.02:228,6,0	1/1:8,13:21:14.71:423,15,0	0/0:1,13:12:0.47:0,0,1	1/1:5,18:19:5.96:252,6,0	0/1:12,18:29:6.56:492,0,7	1/1:6,19:29:18.04:630,18,0	0/0:11,0:8:6.02:0,6,122	1/1:16,0:15:0.94:2,1,0	0/0:46,0:39:0:0,0,0	0/1:5,17:23:0:0,0,0	0/0:11,2:13:0.89:0,1,2	1/1:13,14:25:3.36:49,3,0	0/0:18,0:18:39.13:0,39,1020	1/1:12,15:27:39.13:1232,39,0	1/1:12,1:10:21.07:576,21,0	1/1:5,6:11:6.02:220,6,0
chr10	11972953	.	TGC	T	30.10	PASS	AB=0.864;AC=4;AF=0.071;AN=56;BaseQRankSum=2.582;DP=555;FS=3.519;HRun=0;HaplotypeScore=130.5290;InbreedingCoeff=0.1141;MQ=44.58;MQ0=18;MQRankSum=-3.930;QD=0.42;ReadPosRankSum=-2.475;VQSLOD=2.0254;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:30:66.21:0,66,1284	0/0:9,0:9:23.03:0,23,167	0/0:20,0:14:39.11:0,39,669	0/0:40,0:22:56.37:0,56,1129	0/0:10,0:10:3.01:0,3,61	1/1:13,0:13:1.90:6,2,0	0/0:17,0:13:7.63:0,8,65	0/1:19,1:15:75.31:75,0,149	0/0:20,0:16:17.54:0,18,194	0/0:27,0:25:52.12:0,52,640	0/0:13,0:12:3.76:0,4,16	0/0:22,0:20:17.93:0,18,230	0/0:7,0:7:11.99:0,12,123	0/0:24,0:22:19.55:0,20,220	0/0:16,0:13:8.38:0,8,72	0/0:25,0:19:10.33:0,10,97	0/0:27,0:27:20.51:0,21,271	0/0:35,0:32:35.80:0,36,501	0/0:6,0:4:2.89:0,3,22	0/0:15,0:14:6.45:0,6,50	0/1:27,11:33:18.98:42,0,19	0/0:20,0:20:11.10:0,11,59	0/0:10,0:10:5.67:0,6,36	0/0:30,0:26:19.93:0,20,262	0/0:17,0:17:45.14:0,45,875	0/0:25,0:25:65.40:0,65,712	0/0:10,0:8:20.98:0,21,226	0/0:7,0:7:6.23:0,6,50
chr10	11972954	.	GCACACACACATA	G	252.62	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-0.607;DP=559;FS=5.594;HRun=0;HaplotypeScore=170.7327;InbreedingCoeff=0.6566;MQ=44.95;MQ0=17;MQRankSum=-1.881;QD=4.01;ReadPosRankSum=0.399;VQSLOD=2.4543;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:30:63.19:0,63,2915	0/0:9,0:9:14.77:0,15,233	0/0:20,0:14:42.12:0,42,1229	0/0:38,0:22:63.16:0,63,1852	0/0:11,0:11:6.02:0,6,134	0/0:13,0:13:3.22:0,3,12	0/0:17,0:15:5.65:0,6,58	1/1:19,0:14:12.94:150,13,0	0/0:20,0:16:18.05:0,18,448	0/0:26,0:25:48.69:0,49,1283	0/0:14,0:13:11.36:0,11,104	0/0:21,0:19:15.05:0,15,446	0/0:8,0:8:9.50:0,10,171	0/0:22,0:22:20.04:0,20,334	0/0:16,0:13:9.49:0,9,133	0/0:25,0:19:20.21:0,20,265	0/0:28,0:28:20.90:0,21,504	0/0:35,0:33:33.89:0,34,846	1/1:3,3:4:9:159,9,0	0/0:2,12:13:0.47:0,0,1	1/1:33,0:33:3.01:64,3,0	0/0:21,0:21:12.03:0,12,139	0/0:11,0:11:6.02:0,6,79	0/0:29,0:26:13.71:0,14,276	0/0:17,0:17:42.14:0,42,2340	0/0:25,0:25:48.12:0,48,1246	0/0:10,0:8:21.07:0,21,468	0/0:7,0:7:9.03:0,9,224
chr10	11973072	.	CCTCCGCCACGCCAGCCGA	C	1426.83	PASS	AC=4;AF=0.087;AN=46;BaseQRankSum=5.303;DP=379;FS=12.887;HRun=0;HaplotypeScore=112.0786;InbreedingCoeff=0.6700;MQ=40.90;MQ0=30;MQRankSum=-4.393;QD=62.04;ReadPosRankSum=0.755;VQSLOD=2.5828;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:20:15.05:0,15,1195	0/0:5,0:5:9.03:0,9,550	./.	./.	0/0:8,0:8:11.80:0,12,1045	1/1:1,11:12:21.07:1075,21,0	1/1:5,6:8:9.03:461,9,0	./.	0/0:11,0:8:12.04:0,12,834	0/0:14,0:11:27.09:0,27,1982	0/0:3,0:3:3.01:0,3,262	0/0:14,0:10:27.09:0,27,1795	0/0:7,0:7:15.05:0,15,1249	0/0:26,0:18:36.12:0,36,2709	0/0:5,0:2:3.01:0,3,238	0/0:19,0:13:36.12:0,36,2819	0/0:30,0:30:63.22:0,63,5083	0/0:26,0:25:57.19:0,57,4308	./.	0/0:5,0:4:5.72:0,6,329	./.	0/0:6,0:6:9.03:0,9,607	0/0:8,0:8:9.03:0,9,561	0/0:35,0:32:66.23:0,66,5065	0/0:13,0:12:18.06:0,18,1421	0/0:17,0:12:24.05:0,24,1526	0/0:17,0:14:39.13:0,39,3019	0/0:13,0:12:18.06:0,18,1454
chr10	11976865	.	TGGTTCG	T	1196.79	PASS	AC=8;AF=0.167;AN=48;BaseQRankSum=6.401;DP=821;FS=1.918;HRun=0;HaplotypeScore=74.1823;InbreedingCoeff=0.7628;MQ=19.06;MQ0=399;MQRankSum=-0.729;QD=8.67;ReadPosRankSum=-0.174;VQSLOD=1.9535;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:74,0:33:63.21:0,63,2039	./.	./.	./.	0/0:56,0:3:3.01:0,3,106	0/0:22,0:14:27.09:0,27,957	0/0:25,0:14:33.11:0,33,1033	1/1:17,14:8:15.02:276,15,0	0/0:23,0:21:51.18:0,51,1737	0/0:37,0:16:48.16:0,48,1665	0/0:46,0:4:3.01:0,3,103	0/0:22,0:17:27.05:0,27,662	0/0:26,0:22:57.20:0,57,1917	0/0:31,0:31:66.23:0,66,2250	0/0:36,0:32:81.23:0,81,2703	0/0:27,0:25:59.81:0,60,1746	0/0:34,0:12:21.07:0,21,602	0/0:38,0:12:24.08:0,24,800	1/1:32,6:6:18.06:425,18,0	1/1:25,2:2:3.01:71,3,0	1/1:30,12:11:24.08:566,24,0	./.	0/0:25,0:1:3.01:0,3,106	0/0:29,0:12:30.10:0,30,915	0/0:18,0:2:6.02:0,6,143	0/0:33,0:15:39.12:0,39,1285	0/0:22,0:10:17.65:0,18,605	0/0:33,0:10:9:0,9,133
chr10	11977980	.	CA	C	3806.46	PASS	AB=1.000;AC=43;AF=0.796;AN=54;BaseQRankSum=8.160;DP=390;FS=3.996;HRun=11;HaplotypeScore=59.6694;InbreedingCoeff=0.7739;MQ=62.38;MQ0=8;MQRankSum=-2.529;QD=13.64;ReadPosRankSum=0.287;VQSLOD=3.7423;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,105,1117	1/1:0,4:4:11.99:99,12,0	0/1:9,0:6:5.70:6,0,49	0/0:21,0:9:11.98:0,12,98	1/1:8,16:22:29.95:246,30,0	0/0:17,0:17:39.06:0,39,404	0/0:11,0:7:15.04:0,15,158	1/1:14,0:13:13.19:130,13,0	./.	1/1:4,17:17:44.91:364,45,0	1/1:1,14:15:32.96:271,33,0	1/1:4,3:7:8.97:74,9,0	1/1:1,7:8:14.90:123,15,0	1/1:2,7:9:14.97:123,15,0	1/1:4,12:16:23.88:197,24,0	1/1:1,8:9:23.96:197,24,0	1/1:3,18:21:41.95:345,42,0	1/1:4,13:17:16.75:252,17,0	1/1:10,0:9:17.14:86,17,0	1/1:15,0:14:0.37:133,0,0	1/1:5,0:5:5.71:29,6,0	1/1:1,3:4:8.99:74,9,0	1/1:3,6:8:8.98:74,9,0	1/1:0,8:7:14.97:123,15,0	0/0:19,0:21:44.94:0,45,458	1/1:4,15:17:44.94:369,45,0	1/1:6,8:14:20.97:172,21,0	1/1:2,16:14:38.95:320,39,0
chr10	11977991	.	AT	A	1312.03	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=6.292;DP=363;FS=4.440;HRun=1;HaplotypeScore=69.3105;InbreedingCoeff=0.5013;MQ=65.55;MQ0=5;MQRankSum=-5.074;QD=6.50;ReadPosRankSum=1.893;VQSLOD=0.9348;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,108,1327	1/1:4,0:4:3.04:8,3,0	0/0:8,0:6:14.96:0,15,147	0/0:20,0:11:28.65:0,29,258	1/1:17,0:15:9.38:29,9,0	0/0:17,0:17:45.12:0,45,548	0/0:9,0:9:17.98:0,18,207	1/1:7,10:15:35.66:439,36,0	0/0:2,0:2:2.96:0,3,19	0/0:20,0:17:9.83:0,10,61	1/1:15,0:14:12.79:53,13,0	1/1:5,0:5:0.54:2,1,0	0/0:8,0:8:1.27:0,1,16	0/0:11,0:10:1.10:0,1,34	1/1:12,0:12:5.53:19,6,0	1/1:8,0:8:5.13:33,5,0	0/1:20,0:20:0.17:26,0,0	0/1:16,0:16:6.46:21,0,6	1/1:1,8:8:21.02:268,21,0	1/1:1,14:14:32.68:431,33,0	1/1:0,4:4:8.99:103,9,0	0/1:4,0:4:1.54:2,0,12	0/0:6,0:5:0:0,0,1	1/1:10,0:9:6.50:16,7,0	0/0:21,0:21:50.80:0,51,572	0/1:18,0:17:7.88:8,0,39	0/1:11,0:11:8.94:9,0,16	1/1:17,0:13:8.92:24,9,0
chr10	11978458	.	TAC	T	294.09	PASS	AB=0.972;AC=15;AF=0.288;AN=52;BaseQRankSum=3.260;DP=394;FS=4.856;HRun=0;HaplotypeScore=158.8765;InbreedingCoeff=0.1015;MQ=29.94;MQ0=5;MQRankSum=-1.381;QD=2.01;ReadPosRankSum=-0.153;VQSLOD=2.5078;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:30:20.90:0,21,339	0/0:2,0:2:2.74:0,3,12	0/0:13,0:2:9.03:0,9,142	0/0:11,0:3:8.66:0,9,85	./.	0/0:10,0:10:5.75:0,6,65	0/0:17,0:17:10.78:0,11,153	0/0:34,0:24:61.82:0,62,692	1/1:12,0:12:1.51:31,2,0	0/1:30,1:31:49.94:92,0,50	./.	1/1:11,0:10:1.87:5,2,0	0/0:12,1:13:4.73:0,5,36	0/1:14,0:14:0.14:19,0,0	0/1:8,0:7:6.13:18,0,6	0/1:6,1:7:6.18:19,0,6	0/1:10,0:10:4.28:4,0,14	0/1:7,0:7:31.66:32,0,71	0/0:14,0:12:29.84:0,30,456	0/0:12,0:11:12:0,12,178	0/0:41,0:39:18.51:0,19,313	0/0:10,1:11:2.44:0,2,12	0/1:12,0:12:0:0,0,0	1/1:3,0:3:0.42:1,0,0	0/0:12,0:12:5.90:0,6,101	0/1:22,0:22:26.72:157,0,27	0/1:8,1:9:4.17:44,0,4	0/0:4,0:4:2.74:0,3,12
chr10	11978503	.	CCA	C	218.60	PASS	AB=0.948;AC=18;AF=0.333;AN=54;BaseQRankSum=6.880;DP=770;FS=2.799;HRun=0;HaplotypeScore=266.1704;InbreedingCoeff=0.0962;MQ=34.75;MQ0=50;MQRankSum=-1.984;QD=0.78;ReadPosRankSum=-3.504;VQSLOD=2.0614;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:47:46.78:0,47,1190	1/1:3,1:4:0.85:2,1,0	0/0:63,0:9:12.04:0,12,192	0/0:79,1:18:30.05:0,30,430	./.	1/1:16,1:18:10.10:81,10,0	0/1:25,0:24:5.08:7,0,5	0/0:33,0:27:18.46:0,18,172	0/1:23,0:23:11.21:11,0,14	0/1:44,3:44:54.87:55,0,163	1/1:18,0:18:2.96:20,3,0	0/1:24,1:23:1.98:65,0,2	0/1:17,3:20:15.55:16,0,50	0/0:15,3:17:3.29:0,3,18	0/0:20,0:19:4.86:0,5,21	0/1:16,3:18:10.57:11,0,20	0/1:14,0:14:13.02:13,0,45	0/1:8,1:9:17.96:18,0,28	0/0:24,0:20:20.86:0,21,173	0/0:20,0:25:29.92:0,30,271	0/0:75,0:69:98.90:0,99,913	0/0:19,1:18:4.56:0,5,15	0/1:14,0:14:0.01:23,0,0	1/1:13,0:12:2.85:8,3,0	0/0:18,0:18:20.99:0,21,326	0/1:28,2:29:37.78:38,0,153	0/0:18,2:18:6.31:0,6,21	0/0:16,0:14:2.83:0,3,43
chr10	11978519	.	ATG	A	602.02	PASS	AB=0.992;AC=13;AF=0.232;AN=56;BaseQRankSum=2.760;DP=812;FS=3.795;HRun=0;HaplotypeScore=284.0427;InbreedingCoeff=0.3313;MQ=38.26;MQ0=54;MQRankSum=-3.854;QD=2.50;ReadPosRankSum=1.678;VQSLOD=2.3670;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:54,1:51:64.64:0,65,1806	1/1:5,0:5:2.97:10,3,0	0/0:64,0:5:14.97:0,15,228	0/0:95,1:17:41.44:0,41,533	0/0:14,0:13:5.40:0,5,23	0/0:15,1:16:14.92:0,15,87	0/0:24,1:24:20.46:0,20,253	0/1:28,0:18:44.14:44,0,121	0/0:29,0:29:24.68:0,25,166	0/0:40,0:38:8.20:0,8,346	1/1:14,2:16:1.35:4,1,0	0/0:30,0:28:25.20:0,25,182	0/1:22,0:22:14.79:15,0,94	0/0:19,0:18:17.61:0,18,65	0/0:26,0:26:37.08:0,37,239	0/0:19,0:19:12.39:0,12,69	0/0:20,0:19:3.37:0,3,61	0/0:11,0:11:21.38:0,21,192	1/1:18,0:12:17.61:97,18,0	1/1:20,2:21:13.33:129,13,0	0/1:87,0:78:99:436,0,113	0/0:23,1:22:12.31:0,12,69	0/0:12,0:12:10.38:0,10,65	0/0:20,2:19:9.13:0,9,40	0/0:20,0:20:32.66:0,33,616	0/0:29,0:27:44.24:0,44,396	0/1:22,1:22:7.26:7,0,58	0/1:19,0:17:10.83:11,0,118
chr10	11978521	.	GCA	G	9029.88	PASS	AB=0.575;AC=47;AF=0.839;AN=56;BaseQRankSum=4.914;DP=818;FS=19.404;HRun=0;HaplotypeScore=253.3223;InbreedingCoeff=0.7212;MQ=38.30;MQ0=54;MQRankSum=-0.641;QD=15.54;ReadPosRankSum=2.269;VQSLOD=3.4721;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:54,1:51:85.48:0,85,1478	1/1:2,3:5:6.02:74,6,0	0/0:68,0:5:5.75:0,6,51	0/0:93,0:17:32.92:0,33,400	1/1:8,6:13:6.02:74,6,0	1/1:6,10:16:27.08:332,27,0	1/1:13,10:22:17.09:220,17,0	1/1:20,8:18:17.39:220,17,0	1/1:4,23:27:56.94:731,57,0	1/1:12,27:37:81.25:989,81,0	1/1:7,8:15:6.02:74,6,0	1/1:6,21:27:40.08:472,40,0	0/1:6,17:23:3.74:423,0,4	1/1:4,14:17:23.84:320,24,0	1/1:5,21:26:36.48:444,36,0	1/1:2,17:19:42.13:517,42,0	1/1:11,8:19:3.27:144,3,0	1/1:8,4:12:8.66:142,9,0	1/1:16,3:12:14.24:141,14,0	1/1:14,8:21:22.55:235,23,0	1/1:60,33:83:86.40:1543,86,0	1/1:6,18:22:18.02:255,18,0	1/1:9,3:12:6.80:76,7,0	1/1:8,15:20:15.20:181,15,0	0/0:19,1:20:33.02:0,33,515	1/1:13,16:27:25.62:560,26,0	1/1:8,15:22:39.81:481,40,0	1/1:9,10:17:33.41:384,33,0
chr10	11978523	.	A	ATG	1378.96	PASS	AB=0.973;AC=15;AF=0.268;AN=56;BaseQRankSum=-1.843;DP=841;FS=4.246;HRun=0;HaplotypeScore=289.2613;InbreedingCoeff=-0.2361;MQ=38.59;MQ0=53;MQRankSum=1.820;QD=3.61;ReadPosRankSum=-3.279;VQSLOD=2.0226;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:60,0:56:99:0,102,1608	0/0:5,0:5:3.40:0,3,18	0/0:70,0:7:14.94:0,15,194	0/0:96,0:17:42.04:0,42,540	0/0:15,0:14:4.87:0,5,17	0/0:16,0:16:12.51:0,13,98	0/1:25,0:24:25.58:26,0,242	0/1:31,0:19:61.75:89,0,62	0/1:26,0:27:57.01:57,0,229	0/0:40,0:38:22.48:0,22,570	0/0:15,0:15:0.90:0,1,15	0/1:29,0:27:11.99:12,0,191	0/1:23,0:23:62.79:63,0,136	0/0:18,0:17:21.22:0,21,119	0/1:27,0:27:31.53:32,0,217	0/1:19,0:19:0.60:1,0,71	0/1:18,3:20:75.84:89,0,76	0/1:10,2:12:97.05:97,0,108	0/1:19,0:12:26.53:49,0,27	1/1:22,0:21:4.92:178,5,0	0/1:96,0:86:99:814,0,144	0/0:26,0:24:20.54:0,21,101	0/1:10,1:11:19.05:19,0,59	0/0:22,1:20:1.15:0,1,61	0/0:20,0:20:33.11:0,33,535	0/0:31,0:29:30.68:0,31,397	0/0:24,0:22:16.90:0,17,136	0/1:20,0:17:0.87:1,0,183
chr10	11978613	.	TACCAC	T	8913.60	PASS	AB=0.663;AC=37;AF=0.661;AN=56;BaseQRankSum=4.907;DP=885;FS=42.955;HRun=0;HaplotypeScore=254.7052;InbreedingCoeff=0.8212;MQ=58.13;MQ0=23;MQRankSum=-7.563;QD=19.85;ReadPosRankSum=5.278;VQSLOD=2.3548;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,116,3166	1/1:1,4:5:3.01:59,3,0	0/0:72,0:36:84.70:0,85,1713	0/0:80,0:39:93.04:0,93,1747	1/1:4,16:19:6.02:117,6,0	1/1:5,9:14:5.61:78,6,0	1/1:5,16:20:3.25:74,3,0	0/0:40,0:39:78.26:0,78,2171	1/1:8,28:36:41.67:779,42,0	1/1:11,30:40:99:1886,99,0	1/1:0,14:14:8.24:174,8,0	1/1:8,34:39:27.28:504,27,0	1/1:11,26:34:29.92:510,30,0	1/1:6,19:24:32.98:512,33,0	1/1:7,24:30:19.09:291,19,0	1/1:4,24:26:33.03:605,33,0	1/1:11,15:24:51.17:989,51,0	1/1:6,9:15:30.07:524,30,0	0/0:27,0:24:51.63:0,52,1281	0/0:22,0:22:35.13:0,35,1000	0/0:124,0:124:99:0,307,8437	0/1:5,8:13:0.21:1,0,0	0/1:5,6:10:0:0,0,0	0/1:8,5:12:0.17:0,0,1	0/0:25,0:25:21.99:0,22,1508	1/1:9,18:24:51.17:993,51,0	1/1:4,12:16:23.18:466,23,0	1/1:7,7:12:18.06:350,18,0
chr10	11978891	.	GTACACACA	G	2906.95	PASS	AB=0.989;AC=35;AF=0.625;AN=56;BaseQRankSum=9.093;DP=924;FS=4.604;HRun=0;HaplotypeScore=363.9277;InbreedingCoeff=0.5578;MQ=41.78;MQ0=41;MQRankSum=-8.892;QD=5.64;ReadPosRankSum=-1.697;VQSLOD=0.9755;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:62,0:61:99:0,120,4758	0/1:6,0:6:0.04:0,0,0	0/0:57,0:8:18.52:0,19,557	0/0:36,0:7:21.07:0,21,625	1/1:11,1:12:5.96:48,6,0	1/1:18,0:18:6.18:30,6,0	1/1:18,1:18:8.19:58,8,0	0/0:53,0:40:99:0,99,3319	1/1:48,0:46:42.71:297,43,0	0/1:51,0:51:44.35:513,0,44	1/1:15,0:15:4.24:26,4,0	1/1:29,0:29:12.25:88,12,0	1/1:23,1:24:25.19:232,25,0	1/1:41,0:41:37.23:288,37,0	1/1:56,0:55:25.31:212,25,0	0/1:25,1:25:84.18:208,0,84	0/1:14,0:14:30.21:30,0,63	1/1:11,0:10:15.72:93,16,0	0/0:22,0:18:44.96:0,45,1605	0/0:47,0:47:77.96:0,78,2939	0/0:104,0:102:99:0,151,4584	1/1:28,0:27:4.15:45,4,0	0/1:14,0:14:20.76:24,0,21	1/1:30,0:30:2.30:23,2,0	0/0:26,0:26:63.20:0,63,2499	1/1:46,0:43:90.05:640,90,0	1/1:21,0:20:24.84:182,25,0	1/1:5,0:5:11:68,11,0
chr10	11978894	.	CACACAT	C	11774.43	PASS	AB=0.690;AC=37;AF=0.661;AN=56;BaseQRankSum=6.667;DP=898;FS=14.730;HRun=0;HaplotypeScore=305.7751;InbreedingCoeff=0.7038;MQ=41.47;MQ0=39;MQRankSum=-9.109;QD=24.03;ReadPosRankSum=-3.821;VQSLOD=2.9646;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:61,0:60:99:0,119,3884	1/1:3,2:5:2.99:38,3,0	0/0:56,0:8:17.95:0,18,504	0/0:36,0:8:23.66:0,24,572	1/1:5,5:10:9.02:144,9,0	1/1:5,12:17:32.69:389,33,0	1/1:8,9:16:11.95:214,12,0	0/0:54,0:40:99:0,99,2784	1/1:15,33:46:90.66:1310,91,0	0/1:25,26:50:7.54:1953,0,8	1/1:5,10:15:8.93:82,9,0	1/1:2,27:29:45.47:657,45,0	1/1:6,16:22:38.99:796,39,0	1/1:14,25:39:56.46:834,56,0	1/1:13,40:52:62.28:777,62,0	0/1:8,17:24:6.47:850,0,6	0/1:10,3:13:38.33:198,0,38	1/1:7,4:10:16.27:261,16,0	0/0:24,0:19:47.99:0,48,1443	0/0:46,0:46:78.04:0,78,2382	0/0:104,0:102:99:0,153,3746	1/1:8,17:24:18.09:188,18,0	1/1:7,7:14:12.46:100,12,0	1/1:14,13:27:2.51:24,3,0	0/0:27,0:26:63.20:0,63,2056	1/1:13,30:40:99:2075,105,0	1/1:7,14:20:33.05:654,33,0	1/1:3,2:5:14.94:229,15,0
chr10	11978939	.	GCA	G	930.74	PASS	AB=0.971;AC=10;AF=0.192;AN=52;BaseQRankSum=-3.073;DP=679;FS=14.689;HRun=0;HaplotypeScore=314.0135;InbreedingCoeff=0.6296;MQ=40.36;MQ0=7;MQRankSum=-2.270;QD=5.38;ReadPosRankSum=-4.993;VQSLOD=1.2758;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:52.15:0,52,803	0/0:3,0:3:3.01:0,3,50	0/0:43,1:11:6.02:0,6,83	0/0:52,0:17:32.88:0,33,410	./.	0/0:15,1:16:16.59:0,17,296	0/0:16,0:15:14.98:0,15,249	1/1:9,24:27:57.16:695,57,0	0/0:37,1:38:31.90:0,32,543	0/0:51,0:49:99:0,129,1952	./.	0/0:23,0:22:20.32:0,20,346	0/0:24,1:25:45.09:0,45,712	0/0:30,0:30:24.08:0,24,384	0/1:34,0:34:19.58:20,0,217	0/0:20,0:19:28.98:0,29,495	0/0:8,0:7:15.05:0,15,248	0/0:6,0:5:9.50:0,10,150	1/1:8,6:12:18.05:216,18,0	1/1:8,25:33:11.80:138,12,0	0/1:25,4:29:0.02:0,0,0	0/0:17,1:17:5.68:0,6,99	0/1:16,0:15:0:0,0,0	0/1:13,0:13:0:0,0,0	0/0:25,0:24:32.09:0,32,501	0/0:36,1:35:61.41:0,61,1465	0/0:21,0:20:30.05:0,30,449	0/0:5,0:5:6.02:0,6,99
chr10	11978974	.	CAT	C	1415.26	PASS	AB=0.984;AC=29;AF=0.537;AN=54;BaseQRankSum=3.605;DP=600;FS=36.428;HRun=0;HaplotypeScore=260.9802;InbreedingCoeff=0.3919;MQ=44.82;MQ0=26;MQRankSum=-4.838;QD=3.72;ReadPosRankSum=-0.219;VQSLOD=1.5681;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:37:60.68:0,61,566	0/1:8,0:8:9.09:9,0,40	0/0:33,0:6:11.69:0,12,130	0/1:46,1:14:36.49:36,0,105	./.	0/0:12,0:11:19.26:0,19,170	0/0:7,0:7:8.91:0,9,73	0/0:51,0:38:90.41:0,90,896	1/1:23,1:24:32.23:180,32,0	0/1:39,1:38:99:304,0,241	0/1:12,0:12:0.15:0,0,0	1/1:15,2:16:18.02:104,18,0	1/1:20,1:20:14.20:166,14,0	1/1:14,2:15:18.62:104,19,0	1/1:22,0:22:14.12:88,14,0	1/1:14,0:13:26.38:160,26,0	1/1:8,0:7:10.13:59,10,0	0/1:6,0:4:22.85:29,0,23	0/0:17,0:12:33.30:0,33,316	0/0:28,0:28:2.74:0,3,27	0/1:36,0:27:0.03:0,0,0	1/1:17,0:17:5.85:37,6,0	0/1:17,2:18:0.12:0,0,0	1/1:11,1:11:2.74:12,3,0	0/0:21,0:21:20.04:0,20,222	0/1:38,0:37:99:177,0,244	1/1:16,2:16:19.87:103,20,0	0/1:5,0:5:17.59:24,0,18
chr10	11978978	.	CA	C	2304.60	PASS	AB=0.724;AC=25;AF=0.446;AN=56;BaseQRankSum=3.175;DP=560;FS=9.728;HRun=1;HaplotypeScore=238.0341;InbreedingCoeff=0.2750;MQ=46.88;MQ0=25;MQRankSum=-5.248;QD=6.78;ReadPosRankSum=-0.295;VQSLOD=-0.4614;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:56.56:0,57,812	0/0:5,2:7:8.49:0,8,98	0/0:37,0:9:20.99:0,21,245	0/1:47,0:15:11.10:11,0,153	0/0:7,5:12:0:0,0,0	0/0:12,0:11:21.29:0,21,292	0/0:5,0:5:6.02:0,6,77	0/0:49,0:35:81.63:0,82,1163	1/1:6,15:21:27:266,27,0	0/1:16,17:31:99:640,0,446	0/1:3,7:10:0:0,0,0	1/1:4,10:13:5.72:84,6,0	0/1:6,12:18:20.83:254,0,21	1/1:5,10:14:8.54:123,9,0	1/1:7,12:19:5.63:60,6,0	1/1:2,10:11:5.95:61,6,0	0/1:4,4:7:0.87:131,0,1	0/1:4,3:5:33.99:57,0,34	0/0:16,0:11:33.09:0,33,448	0/0:25,0:25:2.35:0,2,45	0/1:37,0:28:0.13:0,0,1	0/1:8,8:16:0:1,0,0	0/1:9,9:18:0.21:0,0,0	1/1:7,3:9:1.20:5,1,0	0/0:21,0:21:19:0,19,305	0/1:16,15:31:99:493,0,470	1/1:6,10:14:15.95:202,16,0	0/1:3,2:5:35.35:75,0,35
chr10	11978980	.	CACACACAACCACACACAAAT	C	2762.43	PASS	AB=0.982;AC=24;AF=0.429;AN=56;BaseQRankSum=4.344;DP=550;FS=14.210;HRun=0;HaplotypeScore=317.0183;InbreedingCoeff=0.2958;MQ=47.12;MQ0=22;MQRankSum=-3.946;QD=9.53;ReadPosRankSum=-1.500;VQSLOD=0.8943;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:41.73:0,42,1771	0/0:7,0:7:8.92:0,9,237	0/0:34,0:9:21.07:0,21,420	0/0:42,0:14:26.05:0,26,373	0/0:12,0:12:0:0,0,0	0/0:12,0:11:17.33:0,17,488	0/0:6,0:6:7.22:0,7,77	0/0:47,0:33:76.48:0,76,2321	1/1:19,1:20:13.28:294,13,0	0/1:31,1:30:99:679,0,1386	0/1:10,0:10:0:0,0,0	1/1:12,2:13:11.90:276,12,0	0/1:18,1:18:64.31:343,0,64	1/1:13,2:14:8.60:208,9,0	1/1:19,0:19:3.27:14,3,0	1/1:12,0:11:6.22:98,6,0	0/1:8,0:7:16.91:119,0,17	0/1:7,0:5:67.81:68,0,93	0/0:16,0:12:6.53:0,7,836	0/0:25,0:25:2.52:0,3,79	0/1:37,0:28:0.10:0,0,1	0/1:16,0:16:0.15:1,0,0	0/1:17,2:18:0.11:0,0,0	1/1:9,1:9:2.42:53,2,0	0/0:20,0:20:16.69:0,17,744	0/1:31,0:31:99:404,0,1368	1/1:14,2:14:12.74:179,13,0	0/1:5,0:5:99:188,0,125
chr10	11978984	.	CACA	C	219.25	PASS	AB=0.960;AC=15;AF=0.268;AN=56;BaseQRankSum=-0.627;DP=540;FS=4.474;HRun=0;HaplotypeScore=254.8775;InbreedingCoeff=0.2324;MQ=49.79;MQ0=17;MQRankSum=-1.209;QD=1.12;ReadPosRankSum=-4.290;VQSLOD=1.6477;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:35,0:35:6.70:7,0,114	0/1:7,0:7:14.53:30,0,15	0/0:34,0:11:27.06:0,27,360	0/0:40,0:15:3.51:0,4,233	0/0:11,0:11:0:0,0,0	1/1:2,9:10:18.49:182,18,0	0/1:2,3:5:0.12:0,0,0	0/0:40,3:30:20.39:0,20,207	0/0:18,0:18:9.65:0,10,67	0/0:34,0:32:43.86:0,44,349	0/1:10,0:10:0:0,0,0	0/0:15,0:14:5.26:0,5,36	0/0:17,0:16:3.18:0,3,58	0/0:15,0:14:5.45:0,5,38	0/1:19,0:19:0.29:1,0,0	0/0:13,0:13:2.84:0,3,9	0/0:8,0:7:12.22:0,12,97	0/1:6,0:4:2.02:2,0,27	0/1:14,1:11:71.62:76,0,72	0/0:24,0:24:2.14:0,2,10	0/1:36,0:28:0.13:0,0,0	0/1:18,0:18:0.38:1,0,0	0/1:19,0:18:0.10:0,0,0	1/1:9,1:9:2.94:18,3,0	0/0:21,0:21:15.09:0,15,66	0/0:32,0:32:33.86:0,34,337	0/0:18,0:16:9.63:0,10,83	0/1:5,0:5:25.92:26,0,50
chr10	11978987	.	AAC	A	90.20	PASS	AB=0.925;AC=24;AF=0.444;AN=54;BaseQRankSum=6.437;DP=469;FS=7.010;HRun=0;HaplotypeScore=223.3456;InbreedingCoeff=0.2106;MQ=52.47;MQ0=14;MQRankSum=-1.979;QD=0.31;ReadPosRankSum=-5.968;VQSLOD=0.4301;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:35,0:35:39.68:40,0,56	0/0:6,0:6:4.96:0,5,14	0/0:28,1:11:28.71:0,29,326	0/0:35,1:13:8.73:0,9,171	./.	1/1:11,0:10:11.80:52,12,0	0/0:5,0:5:3.63:0,4,22	0/0:37,0:27:38.96:0,39,112	1/1:13,2:15:0.73:3,1,0	0/1:27,0:25:10.35:10,0,46	0/1:6,1:7:0.15:0,0,0	1/1:11,2:12:3.61:15,4,0	0/1:11,3:13:1.17:6,0,1	0/1:10,2:11:0.45:1,0,0	0/1:7,7:14:0.06:0,0,0	1/1:9,1:10:5.44:27,5,0	0/0:7,0:6:0.52:0,1,3	0/1:5,0:4:0.71:5,0,1	0/1:13,0:9:0.67:1,0,19	0/0:23,0:23:1.56:0,2,5	0/1:35,2:29:0:0,0,0	0/0:15,0:15:0.05:0,0,0	0/1:15,0:14:0:0,0,0	1/1:9,0:8:2.74:12,3,0	0/1:21,0:21:6.08:6,0,33	0/1:24,2:26:29.64:30,0,41	1/1:11,0:10:2.23:6,2,0	0/0:5,0:5:0.92:0,1,4
chr10	11978998	.	AAT	A	794.53	PASS	AB=0.981;AC=34;AF=0.630;AN=54;BaseQRankSum=6.207;DP=434;FS=0.000;HRun=0;HaplotypeScore=220.8168;InbreedingCoeff=0.4962;MQ=55.48;MQ0=12;MQRankSum=-4.173;QD=2.76;ReadPosRankSum=-0.183;VQSLOD=2.5632;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,1:32:35.47:0,35,154	1/1:6,0:6:8.08:42,8,0	0/0:30,0:14:2.71:0,3,335	0/0:26,1:12:8.16:0,8,214	./.	1/1:11,0:10:3.17:14,3,0	0/0:5,0:5:2.67:0,3,29	0/0:23,1:19:27.05:0,27,119	1/1:17,0:17:8.62:39,9,0	1/1:23,0:22:58.24:258,58,0	0/1:6,0:6:0.01:0,0,0	1/1:14,0:13:11.73:58,12,0	1/1:16,0:15:12.99:64,13,0	1/1:12,0:11:5.24:23,5,0	0/1:14,0:14:0.02:1,0,0	1/1:12,0:12:8.44:46,8,0	0/1:5,0:4:3.92:7,0,4	1/1:4,0:3:6.65:32,7,0	0/1:10,1:8:23.65:24,0,25	0/1:20,0:20:0.22:0,0,0	0/1:38,3:32:0.03:0,0,0	0/1:13,0:13:0.10:1,0,0	0/1:15,0:14:0.01:0,0,0	1/1:10,0:9:2.66:12,3,0	0/0:19,0:19:14.47:0,14,78	1/1:23,0:23:57.30:255,57,0	1/1:8,0:7:3.29:15,3,0	1/1:6,0:6:12.34:55,12,0
chr10	11979008	.	ATG	A	566.09	PASS	AB=0.836;AC=21;AF=0.389;AN=54;BaseQRankSum=4.432;DP=469;FS=7.496;HRun=0;HaplotypeScore=231.0481;InbreedingCoeff=0.2726;MQ=55.88;MQ0=10;MQRankSum=-2.325;QD=2.53;ReadPosRankSum=-3.346;VQSLOD=1.2620;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:49.94:0,50,881	0/0:5,0:5:8.92:0,9,125	0/1:34,0:15:16.09:16,0,278	0/0:38,0:14:22.90:0,23,298	./.	0/0:11,0:10:7.51:0,8,63	0/0:6,0:6:5.62:0,6,42	0/0:15,0:12:24.06:0,24,404	1/1:14,4:19:4.85:67,5,0	0/1:21,2:24:99:108,0,575	0/1:4,2:6:0.01:0,0,0	1/1:6,5:12:11.84:103,12,0	0/1:10,3:12:18.28:18,0,49	0/0:10,4:13:2.85:0,3,15	0/1:13,3:16:0.02:1,0,0	1/1:6,7:15:11.83:129,12,0	1/1:3,0:4:2.97:20,3,0	0/0:4,0:3:0.26:0,0,64	0/0:10,0:8:21.07:0,21,384	0/0:19,0:19:2.75:0,3,26	0/0:53,0:43:26.85:0,27,448	0/1:10,1:13:0.10:1,0,0	0/1:12,2:13:0:0,0,0	1/1:8,1:9:2.66:12,3,0	0/0:23,0:23:22.63:0,23,440	0/1:21,4:26:99:203,0,655	1/1:5,0:6:2.87:15,3,0	0/1:5,2:7:23.53:24,0,58
chr10	11979012	.	GCACCAATACA	G	2660.37	PASS	AB=0.950;AC=30;AF=0.536;AN=56;BaseQRankSum=1.571;DP=433;FS=24.727;HRun=0;HaplotypeScore=221.0511;InbreedingCoeff=0.2473;MQ=57.89;MQ0=9;MQRankSum=-6.727;QD=11.42;ReadPosRankSum=-2.958;VQSLOD=1.0507;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:43.61:0,44,1804	0/0:5,0:5:9.03:0,9,136	0/0:37,0:16:23.43:0,23,422	0/1:43,0:14:39.49:39,0,187	0/0:8,0:8:0:0,0,0	1/1:3,7:9:13.19:318,13,0	1/1:0,4:4:5.08:196,5,0	1/1:9,0:8:11.95:140,12,0	1/1:11,2:13:8.48:130,8,0	0/1:21,0:20:99:408,0,1001	0/1:4,1:5:0.11:0,0,0	1/1:8,2:10:17.81:255,18,0	0/1:6,3:8:33.17:113,0,33	0/0:8,2:9:2.40:0,2,10	1/1:5,7:12:5.42:32,5,0	1/1:11,1:12:17.53:317,18,0	1/1:4,0:3:2.74:59,3,0	0/1:4,0:3:10.75:11,0,90	0/1:10,0:8:24.75:25,0,375	0/0:21,0:21:9.02:0,9,190	0/0:58,0:46:39.12:0,39,1074	0/1:12,0:12:0.20:0,0,0	0/1:11,0:10:0.21:0,0,0	1/1:9,0:8:2.65:52,3,0	0/0:24,0:24:25.86:0,26,858	0/1:21,2:22:99:534,0,892	1/1:7,0:6:6.01:104,6,0	0/1:5,0:5:95.56:96,0,125
chr10	11979015	.	CCA	C	801.06	PASS	AB=0.966;AC=31;AF=0.574;AN=54;BaseQRankSum=2.876;DP=419;FS=18.854;HRun=0;HaplotypeScore=193.3703;InbreedingCoeff=0.0964;MQ=57.34;MQ0=10;MQRankSum=-4.939;QD=2.55;ReadPosRankSum=-3.472;VQSLOD=0.8494;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:35,0:36:4.12:4,0,77	0/0:5,0:5:7.40:0,7,38	0/1:34,1:14:27.27:27,0,225	0/1:38,4:13:14.30:14,0,171	./.	1/1:9,0:8:9.04:47,9,0	1/1:4,0:4:4.55:28,5,0	1/1:5,0:5:1.83:5,2,0	1/1:12,1:13:5.84:68,6,0	0/1:19,2:20:99:116,0,139	0/1:5,0:5:0.16:0,0,0	1/1:9,1:10:11.92:104,12,0	0/1:9,0:8:6.31:29,0,6	0/0:9,0:8:2.93:0,3,20	0/1:12,0:12:0.02:1,0,0	1/1:10,2:12:14.74:149,15,0	1/1:3,0:3:2.96:19,3,0	0/1:4,0:3:0.07:0,0,18	0/0:10,0:8:16.78:0,17,83	0/0:18,0:18:1.10:0,1,4	0/0:54,0:43:16.73:0,17,48	0/1:10,2:12:0.20:0,0,0	0/1:11,0:10:0.01:0,0,0	1/1:8,1:8:2.66:12,3,0	0/1:21,0:21:27.29:27,0,29	0/1:21,2:22:99:206,0,188	1/1:5,2:6:5.75:30,6,0	0/1:5,0:5:13.83:58,0,14
chr10	11979035	.	C	CCA	2171.02	PASS	AB=0.847;AC=12;AF=0.214;AN=56;BaseQRankSum=0.171;DP=852;FS=27.718;HRun=0;HaplotypeScore=292.8698;InbreedingCoeff=0.1201;MQ=44.41;MQ0=40;MQRankSum=2.157;QD=7.46;ReadPosRankSum=1.766;VQSLOD=2.0598;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,1:48:92.38:0,92,1100	0/0:9,2:11:6.66:0,7,172	0/0:77,0:13:21:0,21,249	0/0:79,0:10:2.43:0,2,158	0/0:19,2:22:21.06:0,21,275	0/0:11,0:10:14.38:0,14,209	0/1:13,1:15:17.86:18,0,159	0/0:26,2:16:41.94:0,42,472	0/0:33,0:32:56.84:0,57,583	0/1:46,3:47:51.74:52,0,1056	0/0:9,1:10:14.85:0,15,197	0/0:21,0:21:32.91:0,33,391	0/0:21,0:20:16.85:0,17,286	0/0:26,0:26:17.95:0,18,236	0/0:36,0:37:47.31:0,47,562	0/0:29,1:30:41.77:0,42,621	0/1:11,1:11:10.81:11,0,228	0/1:8,4:10:99:179,0,124	0/1:5,6:8:27.41:142,0,27	1/1:13,10:23:13.39:576,13,0	1/1:39,51:78:76.01:1258,76,0	0/0:27,3:29:29.64:0,30,386	0/0:25,3:26:35.84:0,36,450	0/1:16,4:20:9.54:10,0,45	0/0:25,0:25:51.13:0,51,670	0/1:43,2:43:21.58:22,0,890	0/0:20,1:19:30.09:0,30,388	0/1:8,1:9:63.31:63,0,112
chr10	11979123	.	T	TAC	10620.09	PASS	AB=0.611;AC=33;AF=0.589;AN=56;BaseQRankSum=11.232;DP=942;FS=1.519;HRun=0;HaplotypeScore=251.2559;InbreedingCoeff=0.7322;MQ=42.04;MQ0=46;MQRankSum=-3.101;QD=25.05;ReadPosRankSum=0.473;VQSLOD=5.2423;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:68,6:74:99:0,121,1914	1/1:7,7:14:14.87:239,15,0	0/0:67,0:5:6.02:0,6,75	0/0:77,0:15:28.81:0,29,313	1/1:4,8:12:6.02:101,6,0	0/0:12,0:12:14.55:0,15,188	0/0:30,0:30:54.50:0,54,669	0/0:70,1:62:32.23:0,32,1386	1/1:13,15:27:48.16:727,48,0	1/1:25,32:54:99:2339,141,0	0/1:8,11:19:8.60:405,0,9	0/1:4,8:11:23.27:187,0,23	1/1:8,12:20:27.05:414,27,0	1/1:6,8:14:6.02:101,6,0	1/1:19,22:39:6.97:594,7,0	1/1:16,15:30:48.12:683,48,0	1/1:8,8:16:27.09:417,27,0	1/1:6,5:10:18.06:290,18,0	0/0:26,0:20:47.37:0,47,607	0/0:29,0:28:54.06:0,54,690	0/0:97,4:89:93.22:0,93,1163	1/1:12,18:30:54.18:899,54,0	1/1:13,11:24:24.08:373,24,0	1/1:8,16:24:15.05:253,15,0	0/0:31,0:31:81.26:0,81,1034	1/1:14,28:42:99:1753,108,0	1/1:8,9:17:27.09:435,27,0	0/1:4,8:11:8.36:410,0,8
chr10	11979130	.	A	ATG	622.49	PASS	AB=0.986;AC=18;AF=0.321;AN=56;BaseQRankSum=11.054;DP=903;FS=0.430;HRun=0;HaplotypeScore=260.8654;InbreedingCoeff=-0.0656;MQ=41.52;MQ0=53;MQRankSum=-6.368;QD=1.98;ReadPosRankSum=4.469;VQSLOD=2.2003;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:71,0:71:99:0,169,2715	0/0:11,1:12:2.85:0,3,61	0/0:86,0:6:15.05:0,15,232	0/0:84,0:12:33.08:0,33,500	1/1:10,1:11:3.15:11,3,0	0/0:12,0:12:15.05:0,15,244	0/0:29,0:29:63.18:0,63,999	0/0:60,0:53:99:0,144,2237	0/1:25,0:24:66.54:67,0,67	0/1:53,0:50:86.69:87,0,113	0/1:17,0:18:14.32:14,0,49	0/1:11,0:10:30.44:30,0,37	1/1:16,0:16:5.49:47,5,0	0/1:13,0:13:18.54:20,0,19	0/1:33,0:31:52.16:52,0,112	0/1:24,0:23:52.91:65,0,53	0/1:14,0:14:34.19:34,0,47	0/1:10,0:9:8.48:8,0,22	0/0:29,0:22:59.94:0,60,933	0/0:26,0:25:54.15:0,54,881	0/0:96,0:85:96.08:0,96,1564	0/0:26,3:29:7.77:0,8,133	0/0:21,0:21:13.14:0,13,131	0/1:19,3:22:4.23:4,0,36	0/0:34,0:34:99:0,99,1600	1/1:36,1:37:8.32:262,8,0	0/1:16,0:16:33.93:34,0,79	0/1:11,0:11:30.70:49,0,31
chr10	11979153	.	TGTGC	T	680.05	PASS	AB=0.898;AC=14;AF=0.250;AN=56;BaseQRankSum=7.671;DP=794;FS=7.480;HRun=0;HaplotypeScore=218.1976;InbreedingCoeff=-0.2087;MQ=35.87;MQ0=65;MQRankSum=-4.561;QD=3.33;ReadPosRankSum=-4.493;VQSLOD=0.5688;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:75,0:76:99:0,130,4793	0/1:10,0:10:48.51:49,0,55	0/0:122,0:14:42.14:0,42,1006	0/0:120,0:12:30.10:0,30,698	0/0:13,2:15:0:0,0,0	0/0:9,0:9:11.54:0,12,96	0/0:17,0:17:41.97:0,42,693	0/0:31,0:26:30.94:0,31,1205	0/1:10,4:13:99:110,0,177	0/1:38,0:35:99:146,0,1154	0/0:19,1:20:11.22:0,11,255	0/1:8,2:9:31.74:32,0,128	0/1:9,2:11:30.99:31,0,105	0/0:8,4:12:8.90:0,9,117	0/0:15,0:13:5.71:0,6,71	0/1:12,3:13:25.86:26,0,111	0/1:8,0:8:8.55:9,0,100	0/1:6,2:7:74.68:89,0,75	0/0:17,0:11:18.64:0,19,482	0/0:20,0:19:23.86:0,24,433	0/0:58,0:51:45.60:0,46,809	0/0:22,1:23:19.87:0,20,434	1/1:21,1:22:1.16:3,1,0	0/1:16,1:17:15.06:15,0,75	0/0:33,0:33:93.14:0,93,2694	0/1:30,1:30:99:171,0,902	0/1:5,2:7:61.76:113,0,62	0/1:13,0:13:34.93:35,0,217
chr10	11979156	.	GCA	G	2470.19	PASS	AB=0.871;AC=22;AF=0.393;AN=56;BaseQRankSum=4.354;DP=841;FS=5.957;HRun=0;HaplotypeScore=218.7595;InbreedingCoeff=-0.1388;MQ=35.69;MQ0=67;MQRankSum=-3.209;QD=6.43;ReadPosRankSum=-0.224;VQSLOD=2.4282;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:72,0:72:99:0,151,2678	0/1:4,6:10:17.51:34,0,18	0/0:124,0:14:30.10:0,30,510	0/0:121,1:12:19.88:0,20,310	0/0:10,7:17:2.99:0,3,23	0/1:5,3:8:27.83:129,0,28	1/1:13,3:16:20.98:248,21,0	1/1:28,1:21:35.52:469,36,0	0/1:13,0:14:6.62:7,0,32	0/1:36,10:43:99:553,0,128	1/1:16,6:22:5.67:65,6,0	0/0:13,0:13:3.29:0,3,10	0/1:9,1:13:26.30:26,0,38	0/1:12,0:14:11.76:12,0,43	0/1:11,0:13:16.36:16,0,81	0/0:16,0:19:15.70:0,16,178	0/1:11,0:11:8.67:9,0,59	0/0:10,0:9:8.93:0,9,116	0/1:13,0:11:44.46:149,0,44	0/1:19,4:24:49.03:49,0,97	0/1:46,5:56:30.94:298,0,31	0/1:17,5:24:18.95:19,0,19	0/0:14,10:24:5.85:0,6,39	0/0:18,0:18:4.43:0,4,32	0/0:33,0:33:96.33:0,96,1667	0/1:22,11:33:99:460,0,111	1/1:7,0:7:4.04:12,4,0	0/1:7,6:15:41.27:83,0,41
chr10	11979192	.	TAC	T	8518.01	PASS	AB=0.700;AC=20;AF=0.357;AN=56;BaseQRankSum=0.670;DP=1330;FS=22.674;HRun=0;HaplotypeScore=368.5989;InbreedingCoeff=-0.5583;MQ=39.29;MQ0=79;MQRankSum=0.923;QD=11.15;ReadPosRankSum=1.111;VQSLOD=3.7038;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:57,1:57:92.80:0,93,2097	0/1:15,8:23:99:181,0,543	0/0:95,1:9:12:0,12,141	0/0:114,0:9:22.63:0,23,322	0/1:15,12:27:99:149,0,181	0/1:13,1:13:32.55:76,0,33	0/1:31,9:39:99:189,0,383	0/0:69,0:53:99:0,150,2460	0/1:24,37:60:99:889,0,591	0/1:53,39:89:99:1483,0,1746	0/1:21,12:33:99:348,0,279	0/1:16,16:32:99:331,0,635	0/1:16,18:33:99:398,0,550	0/1:16,29:43:99:509,0,330	0/1:26,23:49:99:537,0,456	0/1:25,20:42:99:500,0,735	0/1:8,10:19:99:174,0,257	0/1:10,13:22:99:311,0,264	0/0:40,1:25:63.14:0,63,942	0/0:35,0:34:56.82:0,57,971	0/0:106,6:98:99:0,119,1911	0/1:36,14:48:99:257,0,611	0/1:20,11:31:99:244,0,224	0/1:19,28:46:99:166,0,140	0/0:38,0:38:99:0,108,1794	0/1:26,39:63:99:1363,0,782	0/1:9,7:14:99:181,0,159	0/1:10,8:18:99:231,0,405
chr10	11979198	.	CACAT	C	608.85	PASS	AB=0.828;AC=3;AF=0.054;AN=56;BaseQRankSum=0.587;DP=1372;FS=4.542;HRun=0;HaplotypeScore=435.8930;InbreedingCoeff=-0.0549;MQ=39.97;MQ0=78;MQRankSum=-0.782;QD=7.61;ReadPosRankSum=-1.509;VQSLOD=0.8521;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:56:88.11:0,88,3038	0/0:23,0:23:53.19:0,53,1032	0/0:99,0:10:17.90:0,18,197	0/0:110,0:8:20.97:0,21,366	0/0:27,0:27:24.92:0,25,398	0/1:8,7:14:76.80:263,0,77	0/1:38,8:45:99:434,0,731	0/0:76,0:61:99:0,173,4084	0/0:60,0:59:99:0,126,1586	0/0:98,0:95:99:0,223,4149	0/0:35,0:34:56.34:0,56,798	0/0:36,0:36:56.22:0,56,1221	0/0:35,0:34:71.29:0,71,1182	0/0:45,0:43:66.67:0,67,825	0/0:51,0:51:67.17:0,67,1098	0/0:45,0:42:90.41:0,90,1514	0/1:18,0:19:2.70:3,0,442	0/0:23,0:22:5.19:0,5,590	0/0:36,0:24:66.21:0,66,1446	0/0:40,0:39:72.09:0,72,1714	0/0:112,0:101:99:0,129,3115	0/0:51,0:48:62.16:0,62,1194	0/0:33,0:33:41.22:0,41,602	0/0:48,0:47:24.83:0,25,358	0/0:40,0:40:99:0,117,2836	0/0:70,0:68:99:0,181,2368	0/0:19,0:17:32.32:0,32,448	0/0:18,0:18:47.57:0,48,845
chr10	11979261	.	A	AC	5506.88	PASS	AB=0.778;AC=20;AF=0.357;AN=56;BaseQRankSum=6.845;DP=1013;FS=51.547;HRun=1;HaplotypeScore=273.9129;InbreedingCoeff=-0.5533;MQ=49.17;MQ0=10;MQRankSum=-7.474;QD=10.27;ReadPosRankSum=-8.751;VQSLOD=0.5023;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:57,1:58:99:0,151,2016	0/1:7,4:11:99:178,0,118	0/0:61,1:28:64.40:0,64,815	0/0:71,0:28:40.97:0,41,899	0/1:6,7:13:12.81:13,0,55	0/1:13,2:15:27.06:27,0,165	0/1:20,3:22:99:153,0,377	0/0:55,1:55:99:0,159,2188	0/1:21,20:41:99:387,0,380	0/1:35,19:54:99:845,0,778	0/1:15,5:19:99:221,0,291	0/1:25,7:32:99:344,0,316	0/1:32,6:38:99:316,0,343	0/1:18,11:29:99:259,0,316	0/1:37,13:50:99:384,0,463	0/1:22,6:28:99:213,0,223	0/1:12,3:16:92.26:113,0,92	0/1:7,2:11:99:111,0,106	0/0:26,0:24:69.14:0,69,934	0/0:39,2:41:99:0,111,1444	0/0:125,3:128:99:0,316,4294	0/1:21,10:30:99:290,0,166	0/1:16,5:21:99:202,0,179	0/1:13,5:21:46.95:73,0,47	0/0:34,0:34:99:0,102,1389	0/1:23,23:46:99:881,0,576	0/1:22,4:25:99:382,0,151	0/1:7,3:10:99:115,0,207
chr10	11979271	.	T	TACACACCAC	15195.27	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=4.028;DP=965;FS=64.368;HRun=0;HaplotypeScore=322.4342;InbreedingCoeff=0.8770;MQ=48.93;MQ0=6;MQRankSum=-12.553;QD=30.09;ReadPosRankSum=-8.268;VQSLOD=1.5406;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:57:99:0,141,3922	1/1:4,3:8:6.85:177,7,0	0/0:52,0:34:78.17:0,78,1756	0/0:68,0:34:83.18:0,83,1983	1/1:15,1:17:4.43:90,4,0	1/1:4,10:14:12:434,12,0	1/1:20,2:21:27.01:814,27,0	0/0:57,0:56:99:0,147,3460	1/1:29,5:34:12.79:998,13,0	1/1:34,10:43:96.21:3126,96,0	1/1:10,6:20:2.40:128,2,0	1/1:10,20:35:23.84:640,24,0	1/1:7,21:35:29.91:825,30,0	1/1:15,6:21:44.96:1222,45,0	1/1:20,27:51:35.88:909,36,0	1/1:9,19:32:14.88:423,15,0	1/1:12,5:17:11.15:601,11,0	1/1:11,2:13:21.39:435,21,0	0/0:22,0:21:57.18:0,57,1466	0/0:41,0:41:99:0,120,3187	0/0:127,0:127:99:0,306,7997	1/1:13,13:28:11.86:252,12,0	1/1:7,11:22:9.03:309,9,0	1/1:15,2:17:4.83:59,5,0	0/0:34,0:34:93.32:0,93,2734	1/1:27,8:35:75.03:2302,75,0	1/1:5,20:27:30.07:1152,30,0	1/1:10,1:11:15.05:299,15,0
chr10	11979856	.	AG	A	9653.22	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=3.483;DP=434;FS=20.475;HRun=2;HaplotypeScore=114.5812;InbreedingCoeff=0.9929;MQ=66.67;MQ0=0;MQRankSum=-4.159;QD=34.98;ReadPosRankSum=4.283;VQSLOD=3.0176;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:66.05:0,66,888	1/1:0,8:8:24.08:311,24,0	0/0:26,0:26:60.98:0,61,1030	0/0:23,0:23:58.19:0,58,764	1/1:0,12:12:30.10:389,30,0	1/1:0,10:10:24.08:311,24,0	1/1:0,13:13:39.13:506,39,0	0/0:24,0:24:69.23:0,69,1024	1/1:1,18:19:42.14:545,42,0	1/1:0,19:19:57.19:740,57,0	1/1:0,10:10:27.09:350,27,0	1/1:0,14:14:42.14:545,42,0	1/1:0,15:15:42.10:527,42,0	1/1:1,15:16:42.12:530,42,0	1/1:0,16:16:48.16:623,48,0	1/1:0,10:10:30.10:389,30,0	1/1:0,12:12:30.10:389,30,0	1/1:0,10:10:21.07:273,21,0	0/0:14,0:14:39.13:0,39,583	0/0:18,0:18:42.14:0,42,628	0/0:14,0:14:36.06:0,36,493	1/1:1,23:24:60.19:778,60,0	1/1:1,14:15:42.14:545,42,0	1/1:0,11:11:30.10:389,30,0	0/0:15,0:15:39.01:0,39,490	1/1:0,18:18:54.18:699,54,0	1/1:1,17:18:51.17:660,51,0	1/1:0,6:6:12.04:156,12,0
chr10	11979965	.	C	CA	6914.16	PASS	AB=0.600;AC=45;AF=0.978;AN=46;BaseQRankSum=-2.967;DP=175;FS=0.000;HRun=0;HaplotypeScore=55.6549;InbreedingCoeff=-0.0335;MQ=29.85;MQ0=1;MQRankSum=-0.564;QD=42.16;ReadPosRankSum=2.953;VQSLOD=5.2919;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,6:6:15.05:239,15,0	1/1:0,4:4:12.04:191,12,0	./.	./.	1/1:0,7:7:15.05:239,15,0	1/1:0,6:6:18.06:287,18,0	1/1:0,4:4:12.04:191,12,0	1/1:0,15:15:45.13:672,45,0	1/1:0,8:8:21.07:335,21,0	1/1:0,12:12:33.11:527,33,0	0/1:1,2:3:1.32:43,0,1	1/1:0,12:12:33.11:526,33,0	1/1:0,6:6:15.05:239,15,0	1/1:1,10:11:20.46:465,20,0	1/1:0,3:3:9.03:143,9,0	1/1:0,7:7:21.07:335,21,0	./.	./.	1/1:1,11:12:36.09:537,36,0	1/1:0,4:4:9.03:143,9,0	1/1:0,3:3:9.03:144,9,0	1/1:0,11:12:30.89:512,31,0	1/1:0,11:11:24.08:382,24,0	./.	1/1:0,4:4:9.03:143,9,0	1/1:0,7:7:21.07:335,21,0	1/1:1,3:4:9.50:143,10,0	1/1:0,3:3:9.03:144,9,0
chr10	11980389	.	C	CCTCAG	4548.07	PASS	AC=20;AF=0.909;AN=22;DP=412;FS=0.000;HRun=0;HaplotypeScore=142.6674;InbreedingCoeff=0.3675;MQ=11.16;MQ0=349;QD=36.10;VQSLOD=4.2671;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	1/1:5,5:5:15.05:418,15,0	./.	./.	1/1:2,9:9:18.06:495,18,0	./.	./.	./.	./.	1/1:14,6:6:18.06:503,18,0	1/1:5,2:2:3.90:85,4,0	./.	./.	./.	./.	./.	0/0:14,1:1:0:0,0,0	./.	./.	1/1:7,8:8:24.08:655,24,0	./.	1/1:4,10:10:27.09:748,27,0	1/1:7,7:7:15.05:382,15,0	./.	1/1:5,5:5:15.05:417,15,0	./.	1/1:12,2:2:6.02:166,6,0	1/1:3,8:8:24.08:678,24,0
chr10	11980393	.	TG	T	398.02	PASS	AB=0.933;AC=21;AF=0.955;AN=22;BaseQRankSum=0.648;DP=399;FS=0.000;HRun=1;HaplotypeScore=170.6709;InbreedingCoeff=0.2237;MQ=11.34;MQ0=336;MQRankSum=0.377;QD=2.99;ReadPosRankSum=0.347;VQSLOD=-0.3901;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	1/1:4,5:5:6.98:36,7,0	./.	./.	1/1:2,9:9:16.51:58,17,0	./.	./.	./.	./.	1/1:15,5:6:0.84:48,1,0	1/1:4,2:2:3.11:9,3,0	./.	./.	./.	./.	./.	0/1:13,1:1:0:0,0,0	./.	./.	1/1:7,8:8:17.67:59,18,0	./.	1/1:4,10:10:21.38:73,21,0	1/1:7,7:7:7.64:37,8,0	./.	1/1:5,5:5:10.45:38,10,0	./.	1/1:9,2:2:4.59:15,5,0	1/1:1,8:8:22.04:97,22,0
chr10	11980397	.	G	GGA	3073.94	PASS	AB=0.933;AC=23;AF=0.885;AN=26;DP=411;FS=0.000;HRun=0;HaplotypeScore=193.1377;InbreedingCoeff=0.4403;MQ=13.42;MQ0=319;QD=17.77;VQSLOD=3.6449;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	1/1:10,5:11:26.86:345,27,0	./.	./.	1/1:5,9:12:27.09:363,27,0	./.	./.	./.	./.	1/1:20,5:11:29.31:350,29,0	1/1:5,2:3:9.03:112,9,0	./.	1/1:14,0:1:3.01:40,3,0	0/0:13,0:1:0:0,0,0	./.	./.	0/1:13,1:1:0:0,0,0	./.	./.	1/1:10,8:10:30.09:397,30,0	./.	1/1:9,10:15:39.13:531,39,0	1/1:7,7:8:24.06:298,24,0	./.	1/1:7,5:7:21.07:280,21,0	./.	1/1:10,2:3:6.02:85,6,0	1/1:1,8:8:24.08:346,24,0
chr10	11980418	.	CATA	C	3792.26	PASS	AB=0.933;AC=27;AF=0.964;AN=28;DP=389;FS=0.000;HRun=0;HaplotypeScore=166.6818;InbreedingCoeff=0.2057;MQ=13.27;MQ0=303;QD=20.06;VQSLOD=3.3233;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	1/1:4,9:9:27.09:476,27,0	./.	./.	1/1:2,15:15:24.08:423,24,0	./.	./.	./.	1/1:14,1:1:3.01:53,3,0	1/1:12,11:12:29.94:528,30,0	1/1:5,3:3:9.03:159,9,0	./.	1/1:13,2:2:3.01:53,3,0	1/1:9,1:1:3.01:53,3,0	./.	./.	0/1:13,1:1:0:0,0,0	./.	./.	1/1:8,3:3:9.03:153,9,0	./.	1/1:4,13:13:36.12:633,36,0	1/1:7,9:9:27.09:475,27,0	./.	1/1:6,4:4:12.04:205,12,0	./.	1/1:7,5:5:12.04:212,12,0	1/1:1,7:7:21.07:370,21,0
chr10	11981688	.	CCCT	C	1238.87	PASS	AB=0.994;AC=17;AF=0.304;AN=56;BaseQRankSum=0.047;DP=442;FS=2.297;HRun=0;HaplotypeScore=85.1808;InbreedingCoeff=0.0560;MQ=89.48;MQ0=0;MQRankSum=-1.331;QD=5.36;ReadPosRankSum=-0.589;VQSLOD=2.3420;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,99,1855	0/0:3,0:3:4.93:0,5,14	0/0:20,0:20:52.85:0,53,831	0/0:17,0:17:32.90:0,33,464	0/1:18,1:19:9.03:9,0,40	1/1:24,2:26:47.42:256,47,0	1/1:1,19:20:48.16:754,48,0	0/0:15,0:15:39.11:0,39,780	0/0:16,0:16:2.93:0,3,18	0/1:18,0:18:26.03:38,0,26	0/0:11,0:11:6.41:0,6,43	0/0:4,0:4:4.93:0,5,14	0/1:8,0:8:7.69:19,0,8	0/1:7,0:7:15.58:16,0,20	0/0:18,0:18:9.59:0,10,28	0/1:11,0:11:1.60:38,0,2	0/1:28,1:28:23.19:58,0,23	0/1:6,0:6:0.54:31,0,1	0/0:12,0:12:36.04:0,36,645	0/0:18,0:18:50.63:0,51,853	0/0:24,0:24:66.23:0,66,1339	0/1:11,0:11:3.27:4,0,3	0/1:17,0:17:21.64:82,0,22	0/1:13,0:13:8.67:9,0,12	0/0:17,0:17:48.15:0,48,982	0/1:13,0:13:10.97:64,0,11	0/1:21,0:21:18.71:19,0,59	0/1:12,0:12:2.93:3,0,12
chr10	11981689	.	CCT	C	3777.65	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=8.977;DP=450;FS=6.390;HRun=0;HaplotypeScore=70.6871;InbreedingCoeff=0.9567;MQ=88.32;MQ0=0;MQRankSum=-3.559;QD=13.12;ReadPosRankSum=-0.102;VQSLOD=2.7310;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,99,1527	1/1:4,0:4:10.79:56,11,0	0/0:20,0:20:47.78:0,48,693	0/0:17,0:17:36.43:0,36,447	1/1:20,1:21:48.27:309,48,0	1/1:5,21:26:54.11:725,54,0	1/1:19,0:19:47.62:338,48,0	0/0:15,0:15:39.09:0,39,635	1/1:14,2:16:18.59:101,19,0	1/1:16,1:17:39.95:268,40,0	1/1:10,1:11:17.96:99,18,0	1/1:4,0:4:7.69:28,8,0	1/1:9,0:9:24.65:150,25,0	1/1:7,0:7:15.50:85,16,0	1/1:17,0:17:15.48:57,15,0	1/1:8,3:11:25.62:224,26,0	1/1:27,2:28:43:223,43,0	1/1:5,1:6:14.03:85,14,0	0/0:12,0:12:36.08:0,36,554	0/0:20,0:20:56.60:0,57,754	0/0:25,0:25:69.22:0,69,1162	1/1:11,1:12:8.20:62,8,0	1/1:17,0:17:43.07:288,43,0	1/1:12,0:12:18.99:95,19,0	0/0:18,0:18:51.14:0,51,827	1/1:13,0:13:21.62:145,22,0	1/1:22,0:22:47.12:251,47,0	1/1:13,2:15:27.57:189,28,0
chr10	11981690	.	CT	C	6326.83	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=6.351;DP=442;FS=10.754;HRun=1;HaplotypeScore=53.4443;InbreedingCoeff=0.9679;MQ=88.11;MQ0=0;MQRankSum=-3.326;QD=22.68;ReadPosRankSum=0.033;VQSLOD=3.5275;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,99,1191	1/1:2,2:4:12.03:152,12,0	0/0:19,1:20:52.85:0,53,574	0/0:17,0:17:39:0,39,437	1/1:14,6:20:53.93:601,54,0	1/1:23,0:23:52.87:324,53,0	1/1:19,0:19:46:244,46,0	0/0:15,0:15:39.07:0,39,501	1/1:2,13:15:21:268,21,0	1/1:1,15:16:44.91:459,45,0	1/1:1,10:11:23.96:281,24,0	1/1:0,4:4:9.03:124,9,0	1/1:7,2:9:26.25:272,26,0	1/1:4,3:7:18.03:203,18,0	1/1:0,17:17:18.06:249,18,0	1/1:7,4:11:26.86:271,27,0	1/1:3,26:28:47.91:594,48,0	1/1:5,2:7:14.96:149,15,0	0/0:12,0:12:36.05:0,36,438	0/0:21,0:21:59.16:0,59,614	0/0:26,0:26:72.20:0,72,941	1/1:1,10:11:8.96:102,9,0	1/1:10,7:17:48:507,48,0	1/1:0,11:11:21.01:252,21,0	0/0:18,0:18:51.13:0,51,659	1/1:0,12:12:27.02:292,27,0	1/1:8,13:21:57.53:652,58,0	1/1:2,13:15:29.92:331,30,0
chr10	11981788	.	G	GAAA	1943.04	PASS	AB=0.985;AC=23;AF=0.411;AN=56;BaseQRankSum=6.510;DP=474;FS=22.014;HRun=0;HaplotypeScore=132.5345;InbreedingCoeff=-0.3027;MQ=75.47;MQ0=3;MQRankSum=-4.002;QD=6.07;ReadPosRankSum=4.009;VQSLOD=1.2453;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:69.21:0,69,1202	0/1:11,0:11:37.88:63,0,38	0/0:20,0:18:45.69:0,46,602	0/0:28,0:20:23.16:0,23,382	0/1:17,0:17:16.25:16,0,147	0/1:18,0:17:72.02:72,0,108	0/1:9,0:9:20.66:21,0,66	0/0:24,0:24:72.23:0,72,1224	1/1:12,0:12:9.23:125,9,0	0/1:25,0:25:45.18:45,0,291	0/1:29,0:29:42.88:291,0,43	1/1:7,0:7:0.81:19,1,0	0/1:10,0:10:42.16:61,0,42	0/1:9,1:10:47.93:132,0,48	0/1:13,1:14:66.62:146,0,67	0/1:15,0:15:47.73:48,0,117	0/1:20,1:20:99:214,0,140	0/1:16,0:15:83.28:83,0,243	0/0:10,0:10:30.10:0,30,533	0/0:26,0:26:72.23:0,72,1231	0/0:8,0:8:15.05:0,15,251	0/1:12,0:12:18.59:121,0,19	0/1:17,0:17:92.12:94,0,92	1/1:14,0:14:27.59:149,28,0	0/0:12,0:12:36.12:0,36,642	0/1:33,0:33:99:214,0,196	0/1:18,1:19:99:119,0,111	0/1:11,0:11:16.12:80,0,16
chr10	11981789	.	C	CAAA	16016.84	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-4.464;DP=555;FS=1.402;HRun=10;HaplotypeScore=133.1253;InbreedingCoeff=0.9703;MQ=69.77;MQ0=3;MQRankSum=-5.821;QD=40.65;ReadPosRankSum=-1.457;VQSLOD=3.6690;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:28:63.02:0,63,742	1/1:5,8:14:37.37:656,37,0	0/0:22,0:17:26.62:0,27,240	0/0:26,0:18:9.26:0,9,115	1/1:11,7:21:51.07:785,51,0	1/1:3,12:17:27.07:460,27,0	1/1:6,6:13:7.45:490,7,0	0/0:2,0:24:64.80:0,65,406	1/1:9,11:20:60.18:1067,60,0	1/1:15,13:30:69.13:1108,69,0	1/1:13,20:35:89.27:1511,89,0	1/1:1,5:8:24.06:404,24,0	1/1:5,5:12:34.36:578,34,0	1/1:7,5:13:33.08:561,33,0	1/1:14,6:20:52.42:919,52,0	1/1:7,8:18:46.36:763,46,0	1/1:16,9:25:58.25:940,58,0	1/1:12,6:16:25.81:447,26,0	0/0:2,0:11:26.31:0,26,160	0/0:3,0:26:61.70:0,62,374	0/0:1,0:8:11.76:0,12,71	1/1:5,7:13:36.12:645,36,0	1/1:10,10:21:53.17:859,53,0	1/1:6,10:17:39.13:711,39,0	0/0:11,0:14:28.44:0,28,362	1/1:11,17:34:87.25:1486,87,0	1/1:14,11:27:68.20:1125,68,0	1/1:4,8:12:27.09:502,27,0
chr10	11981832	.	CA	C	5042.53	PASS	AB=0.633;AC=31;AF=0.554;AN=56;BaseQRankSum=2.101;DP=598;FS=6.120;HRun=12;HaplotypeScore=106.8645;InbreedingCoeff=0.6428;MQ=63.95;MQ0=3;MQRankSum=-1.213;QD=13.97;ReadPosRankSum=5.544;VQSLOD=4.7670;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,1:26:27.49:0,27,414	1/1:4,10:14:26.44:228,26,0	0/0:39,1:20:26.87:0,27,190	0/0:28,0:12:17.56:0,18,143	1/1:6,16:23:29.31:330,29,0	0/0:18,0:17:42.43:0,42,223	0/0:18,0:18:34.58:0,35,204	0/0:23,1:23:27.66:0,28,442	0/1:6,16:23:8.94:283,0,9	0/1:9,16:25:10.14:297,0,10	1/1:10,23:34:65.21:478,65,0	1/1:4,7:11:19.13:140,19,0	1/1:1,10:12:31.92:238,32,0	1/1:1,11:12:5.33:184,5,0	1/1:4,17:21:25.36:367,25,0	1/1:5,16:21:41.72:320,42,0	1/1:7,15:22:43.69:330,44,0	1/1:5,12:16:11.61:211,12,0	0/0:19,2:21:7.43:0,7,421	0/0:27,0:28:14.74:0,15,478	0/0:16,0:18:35.66:0,36,344	0/1:5,8:13:31.01:156,0,31	1/1:7,11:20:11.52:242,12,0	1/1:7,16:23:42.60:313,43,0	0/0:15,0:15:30.53:0,31,305	1/1:10,21:31:68.45:520,68,0	0/1:6,20:26:0.99:357,0,1	0/1:6,2:8:17.40:51,0,17
chr10	11982525	.	GA	G	9492.24	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=16.133;DP=556;FS=4.943;HRun=8;HaplotypeScore=162.7961;InbreedingCoeff=0.9976;MQ=80.58;MQ0=0;MQRankSum=-2.079;QD=24.53;ReadPosRankSum=4.397;VQSLOD=3.1407;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:54.17:0,54,652	1/1:2,6:8:18.02:172,18,0	0/0:20,0:20:43.01:0,43,488	0/0:12,0:13:26.75:0,27,271	1/1:4,17:21:45.06:432,45,0	1/1:2,20:22:57.51:539,58,0	1/1:3,13:16:36.05:346,36,0	0/0:39,0:39:99:0,114,1362	1/1:1,16:17:42.06:404,42,0	1/1:3,24:27:72.11:694,72,0	1/1:1,23:24:66.10:633,66,0	1/1:3,15:18:39.53:375,40,0	1/1:1,20:21:56.96:527,57,0	1/1:1,18:19:54.08:520,54,0	1/1:1,18:19:51.02:479,51,0	1/1:6,17:23:48.07:462,48,0	1/1:1,13:14:36.06:347,36,0	1/1:1,10:11:30.05:289,30,0	0/0:19,0:19:51.14:0,51,604	0/0:20,0:20:51.15:0,51,605	0/0:17,0:17:45.07:0,45,531	1/1:3,26:29:72.06:684,72,0	1/1:3,23:26:69.06:653,69,0	1/1:0,16:16:42.07:404,42,0	0/0:22,0:22:66.18:0,66,784	1/1:1,23:24:69.02:647,69,0	1/1:1,24:25:72.11:692,72,0	1/1:0,7:7:20.98:193,21,0
chr10	11982929	.	GAA	G	12273.68	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=13.728;DP=548;FS=1.910;HRun=2;HaplotypeScore=137.0044;InbreedingCoeff=0.9970;MQ=76.21;MQ0=0;MQRankSum=-5.239;QD=39.98;ReadPosRankSum=6.402;VQSLOD=4.8636;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,102,2038	1/1:0,6:6:15.05:230,15,0	0/0:21,0:21:63.19:0,63,1114	0/0:22,0:22:39.45:0,39,835	1/1:1,19:20:42.14:643,42,0	0/0:22,0:22:66.23:0,66,1328	0/0:21,0:21:63.22:0,63,1259	0/0:34,0:34:99:0,99,1994	1/1:0,14:14:42.14:643,42,0	1/1:0,21:21:63.17:905,63,0	1/1:3,15:18:42.13:622,42,0	1/1:2,20:22:57.19:861,57,0	1/1:0,8:9:27.09:411,27,0	1/1:2,16:18:45.15:687,45,0	1/1:1,20:21:54.18:826,54,0	1/1:0,12:12:36.12:551,36,0	1/1:0,32:32:84.20:1223,84,0	1/1:0,17:17:51.17:781,51,0	0/0:18,0:18:45.15:0,45,914	0/0:20,0:20:60.21:0,60,1197	0/0:35,0:35:99:0,102,2020	1/1:0,18:18:42.14:642,42,0	1/1:0,11:11:24.08:367,24,0	1/1:0,25:25:66.22:1010,66,0	0/0:12,0:12:36.12:0,36,710	1/1:2,17:19:51.17:781,51,0	1/1:0,14:14:42.14:632,42,0	1/1:0,10:10:30.10:459,30,0
chr10	11983173	.	AAAAG	A	1399.67	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.337;DP=617;FS=5.870;HRun=0;HaplotypeScore=127.9211;InbreedingCoeff=0.8966;MQ=66.79;MQ0=1;MQRankSum=-4.734;QD=31.10;ReadPosRankSum=-1.291;VQSLOD=3.3007;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:78.27:0,78,1950	0/0:9,0:9:18.06:0,18,460	0/0:18,0:16:18.05:0,18,339	0/0:15,0:11:1.96:0,2,251	0/0:21,0:21:60.20:0,60,1479	1/1:5,17:22:39.13:680,39,0	1/1:3,20:23:48.16:841,48,0	0/0:29,0:29:75.26:0,75,1906	0/0:34,0:34:96.33:0,96,2448	0/0:33,0:33:87.29:0,87,2149	0/0:25,0:25:66.23:0,66,1662	0/0:23,0:23:63.22:0,63,1576	0/0:24,0:24:69.24:0,69,1762	0/0:21,0:21:54.19:0,54,1370	0/0:17,0:17:45.15:0,45,1118	0/0:12,0:12:33.09:0,33,731	0/0:19,0:18:54.16:0,54,1253	0/0:20,0:20:54.18:0,54,1336	0/0:20,0:20:54.19:0,54,1362	0/0:29,0:29:78.25:0,78,1930	0/0:23,0:23:57.20:0,57,1440	0/0:21,0:21:60.21:0,60,1531	0/0:15,0:15:36.12:0,36,870	0/0:24,0:24:72.25:0,72,1800	0/0:23,0:23:66.23:0,66,1668	0/0:27,0:27:57.20:0,57,1447	0/0:29,0:29:72.25:0,72,1822	0/0:12,0:12:36.12:0,36,919
chr10	11983474	.	T	TGA	17918.44	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-7.201;DP=579;FS=1.018;HRun=0;HaplotypeScore=85.1162;InbreedingCoeff=0.9918;MQ=72.24;MQ0=0;MQRankSum=-3.704;QD=35.84;ReadPosRankSum=1.840;VQSLOD=7.2242;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:21:59.51:0,60,829	1/1:0,7:8:15.01:260,15,0	0/0:17,0:15:31.89:0,32,332	0/0:14,0:12:19.72:0,20,185	1/1:1,20:24:48.85:792,49,0	1/1:0,22:26:51.12:883,51,0	1/1:0,7:8:21.07:412,21,0	1/1:3,1:23:56.39:482,56,0	1/1:0,13:14:30.10:597,30,0	1/1:2,23:30:78.17:1248,78,0	1/1:2,10:18:35.94:699,36,0	1/1:0,15:17:30.09:555,30,0	1/1:3,14:21:45.04:756,45,0	1/1:0,18:21:45.15:889,45,0	1/1:0,21:23:54.10:998,54,0	1/1:2,18:22:49.02:888,49,0	1/1:1,11:17:36.11:648,36,0	1/1:1,13:16:33.04:581,33,0	1/1:3,0:15:32.62:275,33,0	1/1:1,3:38:99:874,99,0	1/1:1,0:12:26.95:220,27,0	1/1:1,17:23:56.95:946,57,0	1/1:0,25:27:41.35:841,41,0	1/1:0,16:18:30.09:555,30,0	0/0:23,0:26:74.85:0,75,1060	1/1:0,22:26:75.09:1142,75,0	1/1:2,29:40:93.34:1709,93,0	1/1:0,12:13:36.11:670,36,0
chr10	11984208	.	C	CA	285.97	PASS	AB=0.936;AC=12;AF=0.214;AN=56;BaseQRankSum=11.838;DP=491;FS=21.974;HRun=0;HaplotypeScore=124.3145;InbreedingCoeff=-0.2747;MQ=63.54;MQ0=1;MQRankSum=-9.392;QD=1.28;ReadPosRankSum=-0.929;VQSLOD=0.9393;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:93.29:0,93,1269	0/1:12,2:14:10.98:11,0,239	0/0:12,0:10:30.10:0,30,406	0/0:20,0:20:50.35:0,50,719	0/0:12,0:12:18.04:0,18,216	0/1:8,1:9:23.94:24,0,155	0/1:46,2:48:99:140,0,830	0/1:21,0:20:16.80:17,0,509	0/0:10,0:10:15.98:0,16,297	0/0:20,0:20:32.96:0,33,556	0/0:4,0:4:5.13:0,5,109	0/1:26,4:30:76.34:76,0,567	0/1:8,1:9:64.59:65,0,166	0/1:20,0:20:7:7,0,197	0/1:11,0:11:1.73:2,0,175	0/0:15,0:15:9.49:0,9,283	0/1:21,0:21:13.50:13,0,449	0/0:18,0:18:3.60:0,4,261	0/1:16,0:16:6.02:6,0,455	0/0:11,0:11:27.09:0,27,374	0/0:40,0:40:74.25:0,74,948	0/0:13,0:13:17.64:0,18,260	0/0:8,1:9:12.04:0,12,152	0/0:25,0:25:21.49:0,21,406	0/0:15,0:14:42.06:0,42,541	0/1:19,0:18:16.99:17,0,407	0/0:10,0:10:5.21:0,5,161	0/1:3,2:5:48.61:49,0,101
chr10	11984216	.	A	AGGCAGGCAGGCG	10729.87	PASS	AC=46;AF=0.852;AN=54;BaseQRankSum=-1.921;DP=503;FS=2.794;HRun=0;HaplotypeScore=172.3475;InbreedingCoeff=0.6667;MQ=55.29;MQ0=1;MQRankSum=-5.764;QD=25.67;ReadPosRankSum=-0.941;VQSLOD=4.2108;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:51.14:0,51,1626	1/1:9,5:16:9.50:377,10,0	0/0:11,0:9:9.03:0,9,144	0/0:22,0:18:27:0,27,606	./.	1/1:5,0:5:11.79:188,12,0	1/1:50,0:50:48.86:1195,49,0	1/1:18,0:17:11.99:321,12,0	1/1:8,2:13:3.01:177,3,0	1/1:11,3:17:14.37:406,14,0	1/1:2,3:6:3.01:63,3,0	1/1:30,0:30:27.35:726,27,0	1/1:13,0:13:21.02:343,21,0	1/1:9,10:20:21.07:1235,21,0	1/1:2,7:11:11.69:705,12,0	1/1:7,7:14:15.05:843,15,0	1/1:14,7:26:15.05:804,15,0	1/1:9,8:19:12.04:707,12,0	1/1:10,0:10:12.03:333,12,0	1/1:7,2:11:6.45:168,6,0	1/1:29,9:54:1.25:3,1,0	1/1:8,5:15:8.86:278,9,0	1/1:8,0:8:4.67:22,5,0	1/1:15,8:28:3.01:176,3,0	0/0:9,0:9:18.06:0,18,490	1/1:12,4:19:23.93:1057,24,0	1/1:3,5:9:5.73:353,6,0	1/1:5,0:5:6.02:249,6,0
chr10	11987290	.	TCA	T	1807.65	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.263;DP=749;FS=0.572;HRun=0;HaplotypeScore=105.6614;InbreedingCoeff=0.9993;MQ=93.87;MQ0=0;MQRankSum=-2.011;QD=36.89;ReadPosRankSum=-1.311;VQSLOD=5.3599;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:63,0:63:99:0,184,3482	0/0:9,0:9:27.09:0,27,522	0/0:41,0:41:92.25:0,92,1982	0/0:26,0:26:78.24:0,78,1372	0/0:35,0:35:99:0,105,1984	1/1:0,29:29:78.26:1195,78,0	1/1:1,19:20:48.16:735,48,0	0/0:35,0:35:99:0,102,1929	0/0:22,0:22:66.23:0,66,1263	0/0:29,0:29:84.28:0,84,1585	0/0:11,0:11:33.11:0,33,637	0/0:24,0:24:66.23:0,66,1267	0/0:28,0:28:81.28:0,81,1532	0/0:22,0:22:66.21:0,66,1241	0/0:25,0:25:75.26:0,75,1440	0/0:27,0:27:81.28:0,81,1522	0/0:31,0:31:90.29:0,90,1703	0/0:27,0:27:78.27:0,78,1487	0/0:32,0:32:96.30:0,96,1798	0/0:29,0:29:87.30:0,87,1680	0/0:25,0:25:75.26:0,75,1432	0/0:20,0:20:51.17:0,51,976	0/0:26,0:26:75.26:0,75,1431	0/0:25,0:25:68.99:0,69,1332	0/0:20,0:20:60.21:0,60,1123	0/0:30,0:30:90.31:0,90,1711	0/0:23,0:23:69.24:0,69,1331	0/0:15,0:15:45.15:0,45,848
chr10	11987399	.	AGTG	A	20987.42	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=14.707;DP=550;FS=16.461;HRun=0;HaplotypeScore=165.7566;InbreedingCoeff=0.9943;MQ=72.96;MQ0=0;MQRankSum=-6.949;QD=46.23;ReadPosRankSum=3.149;VQSLOD=5.5723;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,123,3022	1/1:2,5:7:15.05:250,15,0	0/0:22,0:22:66.23:0,66,1574	0/0:17,0:17:51.18:0,51,1251	1/1:1,26:27:66.18:1064,66,0	1/1:3,22:25:71.29:1132,71,0	1/1:2,10:12:33.06:516,33,0	1/1:3,24:27:69.25:1194,69,0	1/1:0,21:21:60.21:999,60,0	1/1:0,13:13:36.11:571,36,0	1/1:0,30:30:90.31:1499,90,0	1/1:1,24:25:72.25:1199,72,0	1/1:0,21:21:57.19:949,57,0	1/1:0,13:13:39.13:649,39,0	1/1:1,25:26:74.38:1248,74,0	1/1:0,15:15:45.15:749,45,0	1/1:2,20:22:50.95:847,51,0	1/1:0,15:15:45.15:747,45,0	1/1:13,0:13:39.13:642,39,0	1/1:2,29:31:87.30:1445,87,0	1/1:1,17:18:50.76:849,51,0	1/1:0,15:15:45.15:749,45,0	1/1:0,16:16:45.15:747,45,0	1/1:1,13:14:36.06:600,36,0	0/0:16,0:16:48.16:0,48,1183	1/1:1,19:20:57.19:944,57,0	1/1:0,21:21:63.22:1048,63,0	1/1:0,7:7:21.07:350,21,0
chr10	11987401	.	TGTG	T	21290.28	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=14.631;DP=544;FS=16.578;HRun=0;HaplotypeScore=164.2382;InbreedingCoeff=0.9943;MQ=73.95;MQ0=0;MQRankSum=-7.322;QD=47.42;ReadPosRankSum=2.233;VQSLOD=5.3204;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,123,2841	1/1:5,0:5:15.05:250,15,0	0/0:20,0:20:60.21:0,60,1402	0/0:18,0:18:54.19:0,54,1243	1/1:26,0:26:66.18:1064,66,0	1/1:25,0:24:72.17:1133,72,0	1/1:11,0:11:33.06:516,33,0	1/1:26,0:26:72.25:1199,72,0	1/1:23,0:23:66.23:1095,66,0	1/1:13,0:13:36.11:571,36,0	1/1:30,0:30:90.31:1499,90,0	1/1:24,0:24:72.25:1199,72,0	1/1:21,0:21:57.19:949,57,0	1/1:13,0:13:39.13:649,39,0	1/1:26,0:26:75.26:1249,75,0	1/1:15,0:15:45.15:749,45,0	1/1:21,0:21:51.17:848,51,0	1/1:15,0:15:45.15:747,45,0	1/1:1,13:14:42.14:698,42,0	1/1:30,0:30:90.31:1493,90,0	1/1:18,0:18:51.17:849,51,0	1/1:16,0:16:48.16:796,48,0	1/1:17,0:17:48.16:796,48,0	1/1:13,0:13:36.12:600,36,0	0/0:16,0:16:48.16:0,48,1135	1/1:19,0:19:57.19:944,57,0	1/1:21,0:21:63.22:1048,63,0	1/1:7,0:7:21.07:350,21,0
chr10	11987404	.	G	GAAA	14207.64	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=13.795;DP=591;FS=20.367;HRun=0;HaplotypeScore=205.6651;InbreedingCoeff=0.9953;MQ=72.59;MQ0=0;MQRankSum=-8.327;QD=28.70;ReadPosRankSum=0.957;VQSLOD=3.4492;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,120,2187	1/1:5,0:5:15.01:154,15,0	0/0:21,0:21:60.20:0,60,1088	0/0:18,0:18:54.19:0,54,994	1/1:31,0:31:82.56:884,83,0	1/1:24,0:23:68.12:549,68,0	1/1:11,0:11:32.47:266,32,0	1/1:30,0:30:89.48:805,89,0	1/1:22,2:24:68.43:705,68,0	1/1:16,0:16:44.95:576,45,0	1/1:31,0:31:89.55:837,90,0	1/1:25,0:25:74.91:765,75,0	1/1:22,0:22:56.76:515,57,0	1/1:14,0:14:41.72:365,42,0	1/1:28,0:28:83.61:870,84,0	1/1:16,0:16:47.81:465,48,0	1/1:22,0:22:56.67:590,57,0	1/1:16,0:16:44.79:391,45,0	1/1:15,1:16:42.81:554,43,0	1/1:30,1:31:92.38:887,92,0	1/1:19,0:19:50.78:505,51,0	1/1:17,1:18:53.80:582,54,0	1/1:20,1:21:56.92:632,57,0	1/1:15,0:15:38.80:380,39,0	0/0:17,0:17:48.16:0,48,890	1/1:21,0:21:62.89:688,63,0	1/1:28,0:28:83.76:934,84,0	1/1:11,0:11:32.90:308,33,0
chr10	11990617	.	C	CG	4946.09	PASS	AB=0.787;AC=22;AF=0.393;AN=56;BaseQRankSum=18.635;DP=1066;FS=113.301;HRun=2;HaplotypeScore=230.7253;InbreedingCoeff=-0.6714;MQ=73.61;MQ0=1;MQRankSum=-17.239;QD=5.44;ReadPosRankSum=-3.578;VQSLOD=1.2620;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:55,19:71:99:243,0,1743	0/0:11,2:12:3.60:0,4,342	0/0:29,1:30:30.02:0,30,769	0/1:21,1:22:38.80:39,0,390	0/1:25,6:31:64.22:64,0,738	0/1:19,9:25:99:152,0,532	0/1:28,23:47:99:598,0,857	0/1:30,12:36:92.93:93,0,928	0/1:34,23:50:99:557,0,907	0/1:30,11:39:99:216,0,967	0/0:21,0:21:51.16:0,51,629	0/1:30,10:35:99:116,0,942	0/1:35,12:43:99:160,0,1140	0/1:24,16:33:99:387,0,534	0/1:31,14:40:99:282,0,860	0/1:17,6:20:99:104,0,501	0/1:38,20:56:99:493,0,1151	0/1:27,13:38:99:328,0,790	0/1:20,13:30:99:392,0,429	0/0:28,1:27:74.90:0,75,903	0/1:56,21:76:99:188,0,1610	0/1:24,6:30:99:119,0,719	0/0:33,4:37:5.05:0,5,940	0/1:36,15:51:99:153,0,1092	0/0:26,1:27:35.75:0,36,873	0/1:28,10:35:99:159,0,894	0/1:24,3:25:12.96:13,0,744	0/1:11,3:14:90.40:90,0,332
chr10	11992618	.	T	TA	1178.19	PASS	AB=0.744;AC=22;AF=0.407;AN=54;BaseQRankSum=12.900;DP=328;FS=133.032;HRun=3;HaplotypeScore=108.0141;InbreedingCoeff=0.2605;MQ=69.03;MQ0=0;MQRankSum=-11.739;QD=7.36;ReadPosRankSum=3.358;VQSLOD=-0.0354;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:36.11:0,36,431	0/1:3,2:5:29.56:36,0,30	0/0:10,0:10:11.76:0,12,109	0/0:17,0:15:18.29:0,18,202	0/1:13,9:22:40.29:162,0,40	0/0:26,0:26:75.21:0,75,878	0/0:3,0:3:9.03:0,9,108	0/0:34,0:33:99:0,99,1114	1/1:4,3:7:8.82:54,9,0	1/1:8,8:16:7.27:174,7,0	0/1:15,12:27:99:182,0,146	0/1:4,1:5:21.80:22,0,50	1/1:5,1:6:11.77:72,12,0	1/1:1,0:1:2.94:18,3,0	1/1:4,0:4:8.77:51,9,0	0/1:2,5:7:18.48:26,0,18	0/0:7,0:7:14.96:0,15,160	0/0:2,0:2:2.97:0,3,20	0/0:22,0:22:63.15:0,63,708	0/0:10,0:10:27.08:0,27,323	./.	1/1:5,3:8:23.04:123,23,0	1/1:7,6:13:31.49:173,31,0	0/0:2,0:2:2.97:0,3,20	0/0:21,0:21:60.18:0,60,710	0/1:9,3:12:75.37:75,0,95	0/1:13,7:20:53.64:160,0,54	0/1:6,1:7:32.70:33,0,104
chr10	11992624	.	TAA	T	986.76	PASS	AB=0.687;AC=13;AF=0.260;AN=50;BaseQRankSum=10.970;DP=266;FS=103.763;HRun=2;HaplotypeScore=85.9419;InbreedingCoeff=-0.0090;MQ=70.04;MQ0=0;MQRankSum=-9.891;QD=9.77;ReadPosRankSum=5.769;VQSLOD=-0.6801;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:36.12:0,36,732	0/1:2,2:4:45.74:46,0,110	0/0:7,0:7:12.48:0,12,205	0/0:17,0:15:29.30:0,29,479	0/1:7,9:16:99:191,0,248	0/0:25,0:25:75.26:0,75,1515	0/0:3,0:3:9.02:0,9,147	0/0:34,0:33:99:0,102,2037	./.	0/1:3,8:11:68.51:185,0,69	0/1:10,12:22:99:224,0,311	0/1:4,1:5:16.90:17,0,157	0/0:2,1:3:6.02:0,6,121	./.	./.	0/1:2,5:7:19.94:20,0,107	0/0:8,0:8:18.02:0,18,324	0/0:1,0:1:3.01:0,3,61	0/0:18,0:18:54.17:0,54,1062	0/0:9,0:9:27.09:0,27,549	0/0:2,0:2:6.02:0,6,108	1/1:0,3:3:9.01:86,9,0	1/1:0,6:6:17.95:156,18,0	0/0:3,0:3:8.99:0,9,112	0/0:19,0:19:57.17:0,57,1080	0/1:6,3:9:79.20:79,0,220	0/1:6,7:13:99:120,0,159	0/1:4,1:5:16.21:16,0,229
chr10	11992631	.	T	TAAAG	3159	PASS	AB=0.683;AC=12;AF=0.222;AN=54;BaseQRankSum=10.863;DP=271;FS=123.524;HRun=0;HaplotypeScore=89.2961;InbreedingCoeff=-0.1673;MQ=64.95;MQ0=0;MQRankSum=-9.683;QD=28.46;ReadPosRankSum=5.137;VQSLOD=0.6540;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:39.13:0,39,779	0/1:2,2:4:99:130,0,108	0/0:4,0:4:3.01:0,3,60	0/0:16,0:13:24.08:0,24,401	0/1:9,9:18:99:587,0,252	0/0:24,0:24:72.23:0,72,1394	0/0:2,0:2:6:0,6,84	0/0:35,0:35:99:0,99,1969	0/0:1,3:4:3.01:0,3,57	0/1:5,8:13:99:520,0,198	0/1:11,12:23:99:679,0,307	0/1:4,1:5:59.04:59,0,168	0/0:2,1:3:6.02:0,6,120	./.	0/0:2,0:2:3.01:0,3,60	0/1:2,5:7:62.09:62,0,111	0/0:10,0:10:15.05:0,15,295	0/0:1,0:1:3.01:0,3,56	0/0:15,0:15:45.15:0,45,899	0/0:8,0:8:18.06:0,18,343	0/0:2,0:2:6.02:0,6,120	0/1:1,3:4:47.89:200,0,48	1/1:0,6:6:18.06:419,18,0	0/0:2,0:2:6.02:0,6,120	0/0:19,0:19:54.11:0,54,903	0/1:5,4:9:99:276,0,215	0/1:10,7:17:99:319,0,326	0/1:4,1:5:57.47:57,0,225
chr10	11992974	.	A	AT	11957.57	PASS	AB=0.538;AC=35;AF=0.625;AN=56;BaseQRankSum=10.655;DP=553;FS=6.671;HRun=6;HaplotypeScore=92.3125;InbreedingCoeff=0.9297;MQ=79.80;MQ0=0;MQRankSum=-8.028;QD=33.31;ReadPosRankSum=4.470;VQSLOD=4.4116;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:24.05:0,24,245	0/1:1,6:7:9.55:205,0,10	0/0:17,0:17:45.08:0,45,446	0/0:19,0:19:45.94:0,46,414	1/1:3,36:39:99:1267,105,0	0/0:24,0:24:69.14:0,69,696	0/0:16,0:16:45.10:0,45,459	0/0:34,0:34:87.17:0,87,879	1/1:1,20:21:57.18:717,57,0	1/1:4,23:27:67.77:834,68,0	1/1:1,15:16:45.14:566,45,0	1/1:4,18:22:48.15:604,48,0	1/1:1,18:19:57.18:708,57,0	1/1:1,7:8:18.06:226,18,0	1/1:2,19:21:57.18:717,57,0	1/1:0,15:15:45.13:553,45,0	1/1:2,22:24:60.19:755,60,0	1/1:0,14:14:42.13:528,42,0	0/0:17,0:17:48.09:0,48,482	0/0:16,0:16:48.09:0,48,483	0/0:23,0:23:69.13:0,69,695	1/1:2,23:25:69.18:850,69,0	1/1:1,18:19:48.15:604,48,0	1/1:0,13:13:39.12:491,39,0	0/0:19,0:19:54.12:0,54,551	1/1:2,20:22:29.59:672,30,0	1/1:0,25:25:72.19:888,72,0	1/1:0,22:22:63.16:775,63,0
chr10	11993084	.	AT	A	511.03	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-2.753;DP=540;FS=2.638;HRun=9;HaplotypeScore=146.1259;InbreedingCoeff=0.9701;MQ=75.43;MQ0=0;MQRankSum=2.048;QD=15.49;ReadPosRankSum=2.653;VQSLOD=2.5118;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:16,1:17:14.63:0,15,404	0/0:9,0:9:18.05:0,18,208	0/0:15,0:15:26.85:0,27,258	0/0:12,0:12:16.92:0,17,201	0/0:22,0:22:36:0,36,373	1/1:3,17:20:48.02:439,48,0	1/1:2,11:13:21:192,21,0	0/0:36,0:36:87.24:0,87,987	0/0:32,0:32:75.21:0,75,856	0/0:27,0:27:60.18:0,60,692	0/0:20,0:20:36.06:0,36,393	0/0:27,0:27:66.20:0,66,761	0/0:20,0:20:54.14:0,54,604	0/0:9,0:9:21.05:0,21,233	0/0:17,0:17:24.07:0,24,277	0/0:25,0:25:51.14:0,51,580	0/0:18,0:18:38.97:0,39,419	0/0:6,0:6:18.04:0,18,195	0/0:19,0:19:48.14:0,48,554	0/0:28,0:28:78.22:0,78,892	0/0:21,0:21:51.14:0,51,579	0/0:19,0:19:39.02:0,39,409	0/0:18,0:18:54.12:0,54,604	0/0:16,0:17:30.09:0,30,346	0/0:20,0:20:57.17:0,57,658	0/0:14,0:14:24.05:0,24,264	0/0:27,1:28:41.75:0,42,731	0/0:11,0:11:27.08:0,27,311
chr10	11993330	.	CT	C	80.59	PASS	AC=4;AF=0.074;AN=54;BaseQRankSum=1.142;DP=361;FS=0.000;HRun=3;HaplotypeScore=98.7435;InbreedingCoeff=0.7262;MQ=65.57;MQ0=1;MQRankSum=-3.342;QD=4.24;ReadPosRankSum=-1.847;VQSLOD=-0.4444;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:19:51.15:0,51,697	0/0:7,0:7:8.86:0,9,98	0/0:15,0:12:17.65:0,18,216	0/0:13,0:10:10.67:0,11,185	0/0:9,0:9:16.84:0,17,162	1/1:10,3:13:19.25:153,19,0	1/1:5,1:6:4.79:36,5,0	0/0:38,0:38:92.66:0,93,965	0/0:5,0:5:6.02:0,6,66	0/0:25,0:25:47.56:0,48,460	0/0:10,0:10:14.60:0,15,148	0/0:12,0:12:27.63:0,28,275	0/0:12,0:12:23.52:0,24,257	0/0:7,0:7:16.43:0,16,144	0/0:8,0:8:20.01:0,20,204	0/0:11,0:11:23.34:0,23,215	0/0:11,0:11:26.10:0,26,283	0/0:8,0:8:11.95:0,12,117	0/0:16,0:16:48.12:0,48,609	0/0:17,0:17:50.99:0,51,563	0/0:19,0:19:54.06:0,54,579	0/0:7,0:7:9.02:0,9,97	0/0:8,0:8:17.80:0,18,168	0/0:6,0:6:6:0,6,56	0/0:11,1:12:33.11:0,33,474	0/0:18,0:18:31.82:0,32,322	0/0:25,0:25:54.91:0,55,613	./.
chr10	11993333	.	T	TG	2020.69	PASS	AB=0.995;AC=27;AF=0.500;AN=54;BaseQRankSum=6.333;DP=357;FS=1.527;HRun=1;HaplotypeScore=88.7889;InbreedingCoeff=0.4610;MQ=62.23;MQ0=2;MQRankSum=-6.061;QD=10.31;ReadPosRankSum=3.278;VQSLOD=1.7819;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:21:47.11:0,47,556	0/0:7,0:7:5.68:0,6,29	0/0:12,0:8:8.20:0,8,125	0/1:13,0:10:3.12:3,0,55	1/1:7,1:8:11.92:90,12,0	0/0:15,0:15:27.84:0,28,201	0/0:5,0:5:8.89:0,9,81	0/0:34,0:34:93.70:0,94,761	1/1:5,0:5:5.87:50,6,0	0/1:24,1:25:2.02:292,0,2	0/1:8,0:8:11.49:63,0,11	0/1:12,0:12:9.14:158,0,9	1/1:12,0:12:23.93:208,24,0	0/1:9,0:9:3.33:80,0,3	1/1:9,0:9:20.45:139,20,0	0/1:11,0:11:26.29:99,0,26	1/1:14,0:14:21.48:185,21,0	1/1:6,1:7:11.96:114,12,0	0/0:17,0:17:25.06:0,25,416	0/0:17,0:17:51.01:0,51,474	0/0:19,0:19:47.82:0,48,412	1/1:7,0:7:5.99:50,6,0	1/1:7,0:7:2.96:89,3,0	1/1:5,0:5:5.90:41,6,0	0/0:12,0:12:30.07:0,30,349	0/1:18,0:18:11.37:156,0,11	1/1:25,1:26:41.96:393,42,0	./.
chr10	11993351	.	G	GT	4019.24	PASS	AB=0.629;AC=27;AF=0.482;AN=56;BaseQRankSum=7.749;DP=342;FS=46.827;HRun=2;HaplotypeScore=78.1181;InbreedingCoeff=0.4247;MQ=57.87;MQ0=2;MQRankSum=-6.351;QD=22.58;ReadPosRankSum=1.979;VQSLOD=0.8203;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:54.10:0,54,648	1/1:1,5:6:12.03:155,12,0	0/0:17,0:13:26.90:0,27,284	0/0:8,0:3:3.37:0,3,9	1/1:3,6:12:1.66:240,2,0	0/0:3,0:13:6.73:0,7,55	0/0:2,0:9:9.48:0,9,39	0/0:38,0:38:97.77:0,98,1112	1/1:1,5:7:15.04:184,15,0	1/1:3,16:23:36.52:680,37,0	0/1:2,5:10:3.47:242,0,3	0/1:3,4:10:2.16:235,0,2	1/1:6,1:10:12.03:139,12,0	1/1:1,5:8:18.52:221,19,0	0/1:3,0:5:11.14:50,0,11	1/1:1,8:11:7.92:357,8,0	0/1:7,6:14:14.95:317,0,15	1/1:1,4:7:15.04:188,15,0	0/0:13,0:13:39.11:0,39,469	0/0:12,0:12:33.09:0,33,398	0/0:16,0:16:42.60:0,43,486	0/1:3,2:7:16:62,0,16	1/1:1,7:9:18.01:239,18,0	0/0:3,1:6:5.60:0,6,28	0/0:13,0:13:36.11:0,36,446	0/1:5,12:19:38.82:378,0,39	0/1:9,6:18:43.79:290,0,44	1/1:0,1:2:3.01:43,3,0
chr10	11993354	.	GT	G	93.27	PASS	AB=0.950;AC=6;AF=0.107;AN=56;BaseQRankSum=3.201;DP=337;FS=4.889;HRun=3;HaplotypeScore=88.5783;InbreedingCoeff=0.5165;MQ=58.68;MQ0=2;MQRankSum=-5.290;QD=2.52;ReadPosRankSum=-0.803;VQSLOD=-0.5040;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:60.20:0,60,855	0/0:6,0:6:11.98:0,12,114	0/0:18,0:14:22.69:0,23,344	0/0:8,0:3:5.59:0,6,26	0/0:12,0:12:23.66:0,24,200	1/1:11,1:12:20.15:140,20,0	1/1:7,1:8:8.61:62,9,0	0/0:40,0:40:95.83:0,96,1399	0/0:7,0:7:14.91:0,15,124	0/0:22,0:22:45.46:0,45,481	0/1:8,1:9:0.98:1,0,157	0/1:8,0:8:6.75:7,0,148	0/0:10,0:10:11.39:0,11,103	0/0:8,0:8:20.88:0,21,176	0/0:4,0:4:5.83:0,6,34	0/0:12,0:12:17.48:0,17,229	0/0:14,0:14:14.89:0,15,236	0/0:8,0:8:20.94:0,21,219	0/0:14,0:14:42.13:0,42,574	0/0:12,0:12:33.10:0,33,472	0/0:15,0:15:45.12:0,45,623	0/0:6,0:6:8:0,8,60	0/0:8,0:8:17.94:0,18,154	0/0:6,0:6:8.13:0,8,73	0/0:13,0:13:36.12:0,36,518	0/0:18,0:18:30.70:0,31,312	0/0:15,1:16:29.23:0,29,291	0/0:2,0:2:3.01:0,3,31
chr10	11993445	.	A	ATG	5748.32	PASS	AC=34;AF=0.630;AN=54;BaseQRankSum=12.379;DP=317;FS=50.628;HRun=0;HaplotypeScore=67.2523;InbreedingCoeff=0.8954;MQ=79.20;MQ0=0;MQRankSum=-10.971;QD=40.48;ReadPosRankSum=1.296;VQSLOD=2.1038;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:54.11:0,54,714	1/1:0,4:4:12.04:217,12,0	0/0:10,0:10:23.81:0,24,321	0/0:10,0:10:23.84:0,24,284	1/1:4,8:12:18.06:326,18,0	0/0:16,0:16:45.14:0,45,623	0/0:6,0:6:18.06:0,18,258	0/0:35,0:35:90.30:0,90,1269	1/1:0,5:5:15.05:271,15,0	1/1:1,6:7:21.07:381,21,0	1/1:1,8:9:15.05:271,15,0	1/1:0,2:2:3.01:54,3,0	1/1:1,6:7:15.05:270,15,0	1/1:0,1:1:3.01:54,3,0	1/1:0,2:2:3.01:55,3,0	1/1:0,7:7:18.06:321,18,0	1/1:4,11:15:36.12:649,36,0	1/1:4,4:7:14.99:207,15,0	0/0:24,0:24:69.21:0,69,956	0/0:21,0:21:63.20:0,63,884	0/0:7,0:7:18.06:0,18,258	1/1:1,7:8:15.05:273,15,0	1/1:1,12:13:33.11:598,33,0	./.	0/0:25,0:25:72.23:0,72,1015	1/1:7,12:19:45.06:719,45,0	1/1:5,14:19:48.16:862,48,0	1/1:0,4:4:12.04:218,12,0
chr10	11993468	.	G	GGATGTT	7733.45	PASS	AC=30;AF=0.600;AN=50;BaseQRankSum=11.597;DP=285;FS=47.031;HRun=0;HaplotypeScore=72.1366;InbreedingCoeff=0.8339;MQ=70.64;MQ0=0;MQRankSum=-11.744;QD=67.84;ReadPosRankSum=3.277;VQSLOD=3.0547;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:57.16:0,57,1189	1/1:0,3:3:9.03:313,9,0	0/0:8,0:8:18.05:0,18,338	0/0:5,0:5:9.50:0,9,206	1/1:3,9:12:33.07:1031,33,0	0/0:18,0:18:51.15:0,51,1079	0/0:3,0:3:9.03:0,9,206	0/0:34,0:34:81.27:0,81,1809	1/1:1,3:4:9.03:313,9,0	1/1:1,8:10:24.08:834,24,0	1/1:1,11:12:21.07:729,21,0	1/1:0,2:2:3.01:104,3,0	1/1:3,3:6:6.02:208,6,0	./.	./.	1/1:1,2:3:6.02:197,6,0	1/1:7,5:12:26.95:551,27,0	1/1:2,1:2:3.01:104,3,0	0/0:24,0:24:66.21:0,66,1424	0/0:21,0:21:57.18:0,57,1257	0/0:5,0:5:15.05:0,15,343	1/1:1,2:3:3.01:104,3,0	1/1:2,6:8:15.05:520,15,0	./.	0/0:29,0:29:78.26:0,78,1734	1/1:2,14:16:39.04:1186,39,0	1/1:1,13:15:36.12:1235,36,0	1/1:3,2:5:9.03:303,9,0
chr10	11994281	.	T	TTA	629.28	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=6.768;DP=337;FS=3.247;HRun=0;HaplotypeScore=60.4889;InbreedingCoeff=0.6344;MQ=69.24;MQ0=1;MQRankSum=-4.521;QD=25.17;ReadPosRankSum=-0.033;VQSLOD=3.9054;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:57.19:0,57,872	0/0:7,0:7:21.07:0,21,319	0/0:13,0:13:21.07:0,21,298	0/1:7,0:6:6.11:6,0,79	0/0:15,0:15:39.13:0,39,597	1/1:5,11:16:50.80:712,51,0	1/1:1,0:1:2.99:24,3,0	0/0:28,0:28:81.25:0,81,1185	0/0:11,0:11:27.09:0,27,413	0/0:21,0:21:56.86:0,57,837	0/0:15,0:15:36.11:0,36,528	0/0:7,0:7:21.06:0,21,300	0/0:8,0:8:24.06:0,24,329	0/0:3,0:3:9.03:0,9,137	0/0:12,0:12:36.11:0,36,532	0/0:3,0:3:6.02:0,6,92	0/0:25,0:25:75.23:0,75,1104	0/0:20,0:20:60.14:0,60,870	0/0:15,0:14:42.14:0,42,641	0/0:7,0:7:21.06:0,21,302	0/0:8,0:8:24.02:0,24,299	0/0:3,0:3:9.03:0,9,138	0/0:10,0:10:30.10:0,30,457	0/0:4,0:4:12.04:0,12,184	0/0:12,0:12:36.12:0,36,551	0/0:10,0:10:30.09:0,30,423	0/0:20,0:20:57.14:0,57,808	0/0:15,0:15:45.10:0,45,620
chr10	11994284	.	TAA	T	335.89	PASS	AB=1.000;AC=3;AF=0.056;AN=54;BaseQRankSum=6.979;DP=323;FS=3.279;HRun=2;HaplotypeScore=57.1678;InbreedingCoeff=0.6673;MQ=68.22;MQ0=1;MQRankSum=-5.187;QD=13.44;ReadPosRankSum=0.747;VQSLOD=0.9036;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:63.08:0,63,1100	0/0:7,0:7:21.03:0,21,339	0/0:10,0:10:24.07:0,24,371	0/1:8,0:5:0.16:0,0,74	0/0:13,0:13:39.13:0,39,744	1/1:13,4:16:50.72:430,51,0	./.	0/0:28,0:28:81.28:0,81,1544	0/0:9,0:9:27.08:0,27,491	0/0:20,0:20:59.68:0,60,1028	0/0:13,0:13:38.86:0,39,662	0/0:6,0:6:18.06:0,18,347	0/0:6,0:6:18.06:0,18,348	0/0:4,0:4:12.04:0,12,206	0/0:12,0:12:36.11:0,36,618	0/0:3,0:3:9.03:0,9,161	0/0:24,0:24:72.25:0,72,1380	0/0:18,0:18:54.19:0,54,1037	0/0:19,0:18:54.19:0,54,1010	0/0:8,0:8:24.08:0,24,443	0/0:7,0:7:18.04:0,18,313	0/0:3,0:3:9.03:0,9,168	0/0:10,0:10:29.98:0,30,436	0/0:4,0:4:12.04:0,12,227	0/0:14,0:14:42.14:0,42,800	0/0:8,0:8:24.08:0,24,435	0/0:19,0:19:54.17:0,54,970	0/0:12,0:12:36.12:0,36,695
chr10	11994285	.	A	AT	422.39	PASS	AC=2;AF=0.037;AN=54;BaseQRankSum=6.816;DP=324;FS=8.861;HRun=6;HaplotypeScore=52.4399;InbreedingCoeff=0.7508;MQ=68.08;MQ0=1;MQRankSum=-6.029;QD=24.85;ReadPosRankSum=1.250;VQSLOD=3.0903;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:57.89:0,58,810	0/0:6,0:6:18.06:0,18,249	0/0:10,0:10:24.03:0,24,291	0/0:8,0:5:6.35:0,6,51	0/0:14,0:14:39.13:0,39,544	1/1:6,11:16:45.64:517,46,0	./.	0/0:27,0:27:81.27:0,81,1127	0/0:10,0:10:27.08:0,27,361	0/0:20,0:20:57.66:0,58,781	0/0:13,0:13:39.08:0,39,506	0/0:6,0:6:18.06:0,18,252	0/0:6,0:6:18.06:0,18,252	0/0:4,0:4:12.01:0,12,147	0/0:12,0:12:36.10:0,36,479	0/0:3,0:3:9.03:0,9,122	0/0:25,0:25:72.23:0,72,990	0/0:18,0:18:54.18:0,54,755	0/0:19,0:18:54.17:0,54,732	0/0:8,0:8:24.07:0,24,314	0/0:6,0:6:15.05:0,15,209	0/0:3,0:3:9.03:0,9,124	0/0:9,0:9:27.02:0,27,319	0/0:4,0:4:12.04:0,12,168	0/0:14,0:14:42.11:0,42,552	0/0:9,0:9:24.07:0,24,321	0/0:19,0:19:54.18:0,54,740	0/0:13,0:13:36.11:0,36,504
chr10	11994305	.	T	TTATA	728.99	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=4.312;DP=336;FS=14.080;HRun=0;HaplotypeScore=59.0689;InbreedingCoeff=0.7298;MQ=72.13;MQ0=1;MQRankSum=-5.041;QD=42.88;ReadPosRankSum=2.256;VQSLOD=2.3987;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:55.11:0,55,944	0/0:5,0:5:15.04:0,15,248	0/0:10,0:10:12:0,12,170	0/0:10,0:7:5.42:0,5,59	0/0:13,0:13:39.13:0,39,703	1/1:5,11:15:25.66:812,26,0	1/1:1,0:1:2.99:24,3,0	0/0:25,0:25:69.19:0,69,1127	0/0:16,0:16:48.09:0,48,691	0/0:12,0:12:36.12:0,36,673	0/0:9,0:9:24.08:0,24,448	0/0:7,0:7:18.05:0,18,308	0/0:7,0:7:15.05:0,15,285	0/0:5,0:5:15.04:0,15,255	0/0:13,0:13:36.12:0,36,653	0/0:5,0:5:15.04:0,15,253	0/0:35,0:34:99:0,99,1714	0/0:16,0:16:45.05:0,45,745	0/0:20,0:19:57.15:0,57,1001	0/0:6,0:6:18.04:0,18,281	0/0:9,0:9:27.06:0,27,418	0/0:2,0:2:6.02:0,6,113	0/0:7,0:7:21.06:0,21,348	0/0:3,0:3:9.02:0,9,141	0/0:19,0:19:51.15:0,51,875	0/0:11,0:11:33.11:0,33,596	0/0:22,0:22:63.22:0,63,1184	0/0:12,0:12:24.04:0,24,359
chr10	11994898	.	AT	A	9111.72	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=8.301;DP=591;FS=2.354;HRun=8;HaplotypeScore=69.7756;InbreedingCoeff=0.9764;MQ=75.63;MQ0=0;MQRankSum=0.189;QD=24.04;ReadPosRankSum=5.748;VQSLOD=5.1931;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,126,1475	1/1:1,13:13:36.06:348,36,0	0/0:20,0:20:48.15:0,48,579	0/0:10,0:10:23.89:0,24,241	1/1:3,20:23:57.08:548,57,0	0/0:18,0:18:44.77:0,45,350	0/0:19,0:19:38.64:0,39,276	0/0:27,0:27:78.23:0,78,932	1/1:3,20:23:57.09:550,57,0	1/1:3,19:22:54.06:515,54,0	1/1:2,15:17:36.05:348,36,0	1/1:2,18:20:51.08:493,51,0	1/1:1,20:21:54.08:521,54,0	1/1:2,18:20:54.09:522,54,0	1/1:1,21:22:54.09:522,54,0	1/1:3,10:13:24.04:232,24,0	1/1:3,23:26:60.09:579,60,0	1/1:0,17:17:51.08:492,51,0	0/0:21,0:21:63.17:0,63,739	0/0:19,0:19:48.15:0,48,580	0/0:22,0:22:66.20:0,66,797	1/1:1,24:25:66.10:634,66,0	1/1:2,26:28:69.10:665,69,0	1/1:0,21:21:63.10:608,63,0	0/0:9,1:11:3.99:0,4,301	1/1:6,31:37:93.14:898,93,0	1/1:1,19:20:45.03:434,45,0	1/1:3,7:10:21.03:203,21,0
chr10	11994948	.	GC	G	918.69	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.120;DP=570;FS=3.375;HRun=2;HaplotypeScore=81.6267;InbreedingCoeff=0.9944;MQ=89.86;MQ0=0;MQRankSum=-3.936;QD=28.71;ReadPosRankSum=-0.571;VQSLOD=3.1478;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,159,2246	0/0:12,0:11:33.11:0,33,492	0/0:25,0:26:68.03:0,68,941	0/0:18,0:19:36.49:0,36,582	0/0:25,0:25:69.21:0,69,1009	1/1:0,20:20:57.12:709,57,0	1/1:1,11:12:27.05:331,27,0	0/0:27,0:27:81.27:0,81,1193	0/0:17,0:17:51.15:0,51,723	0/0:23,0:23:69.21:0,69,978	0/0:15,0:15:42.13:0,42,605	0/0:26,0:26:75.24:0,75,1100	0/0:22,0:22:63.18:0,63,898	0/0:12,0:12:36.10:0,36,517	0/0:22,0:22:63.19:0,63,905	0/0:9,0:9:27.09:0,27,404	0/0:25,0:25:72.18:0,72,1013	0/0:22,0:22:63.12:0,63,852	0/0:27,0:27:81.27:0,81,1189	0/0:17,0:17:47.02:0,47,605	0/0:24,0:24:72.24:0,72,1076	0/0:16,0:16:45.14:0,45,651	0/0:13,0:13:33.10:0,33,459	0/0:17,0:17:51.13:0,51,702	0/0:13,0:13:39.12:0,39,556	0/0:25,0:25:72.21:0,72,1037	0/0:24,0:24:60.16:0,60,836	0/0:7,0:7:18.06:0,18,269
chr10	11995065	.	CT	C	633.05	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.923;DP=485;FS=1.750;HRun=4;HaplotypeScore=54.6383;InbreedingCoeff=0.9817;MQ=84.56;MQ0=1;MQRankSum=-5.874;QD=24.35;ReadPosRankSum=-0.602;VQSLOD=2.3377;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:96.25:0,96,1300	0/0:8,0:8:24.07:0,24,318	0/0:12,0:12:32.73:0,33,376	0/0:22,0:22:55.62:0,56,640	0/0:15,0:15:45.14:0,45,614	1/1:3,14:17:42.01:467,42,0	1/1:0,9:9:26.96:287,27,0	0/0:40,0:40:99:0,111,1494	0/0:26,0:26:69.21:0,69,933	0/0:17,0:17:51.17:0,51,713	0/0:15,0:15:45.14:0,45,613	0/0:11,0:11:30.10:0,30,419	0/0:13,0:13:36.09:0,36,468	0/0:17,0:17:51.16:0,51,695	0/0:21,0:21:60.16:0,60,818	0/0:13,0:13:36.12:0,36,503	0/0:20,0:20:57.19:0,57,797	0/0:24,0:23:66.20:0,66,906	0/0:25,0:25:69.21:0,69,935	0/0:15,0:15:45.11:0,45,606	0/0:17,0:17:48.15:0,48,654	0/0:13,0:13:39.13:0,39,546	0/0:5,0:5:15.05:0,15,210	0/0:20,0:20:60.19:0,60,822	0/0:14,0:14:42.14:0,42,587	0/0:22,0:22:63.21:0,63,882	0/0:17,0:17:48.11:0,48,633	0/0:5,0:5:15.02:0,15,175
chr10	11995197	.	ATCCCTCCAAATCATTT	A	342.96	PASS	AC=2;AF=0.037;AN=54;BaseQRankSum=2.970;DP=331;FS=0.000;HRun=0;HaplotypeScore=147.2842;InbreedingCoeff=0.7409;MQ=103.87;MQ0=0;MQRankSum=-2.725;QD=57.16;ReadPosRankSum=0.043;VQSLOD=3.3195;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:51.18:0,51,3623	0/0:3,0:3:9.03:0,9,575	0/0:23,0:23:63.22:0,63,3241	0/0:20,0:20:45.15:0,45,2591	0/0:11,0:11:33.11:0,33,2504	1/1:1,5:6:9.03:426,9,0	./.	0/0:27,0:27:78.26:0,78,5114	0/0:17,0:17:51.18:0,51,3521	0/0:8,0:8:21.07:0,21,1581	0/0:2,0:2:6.02:0,6,475	0/0:5,0:5:15.05:0,15,765	0/0:12,0:12:36.10:0,36,1857	0/0:14,0:14:42.14:0,42,3023	0/0:9,0:9:27.09:0,27,1848	0/0:10,0:10:27.09:0,27,2141	0/0:11,0:10:30.10:0,30,2308	0/0:11,0:11:33.11:0,33,2250	0/0:15,0:15:42.14:0,42,2653	0/0:15,0:15:42.14:0,42,2813	0/0:20,0:20:54.19:0,54,3853	0/0:12,0:12:33.11:0,33,2452	0/0:9,0:9:27.09:0,27,2027	0/0:13,0:13:39.12:0,39,2671	0/0:8,0:8:24.08:0,24,1906	0/0:10,0:10:30.10:0,30,2136	0/0:11,0:11:33.11:0,33,2287	0/0:3,0:3:9.03:0,9,677
chr10	11995235	.	CTCT	C	549.40	PASS	AB=1.000;AC=29;AF=0.537;AN=54;BaseQRankSum=1.903;DP=194;FS=2.707;HRun=0;HaplotypeScore=40.8220;InbreedingCoeff=0.5008;MQ=74.16;MQ0=5;MQRankSum=-2.223;QD=7.33;ReadPosRankSum=-2.878;VQSLOD=1.6945;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:7:20.94:0,21,332	1/1:2,0:1:1.25:3,1,0	0/0:31,0:15:41.45:0,41,719	0/0:16,0:8:10.59:0,11,187	1/1:5,0:5:5.66:42,6,0	0/0:6,0:6:14.76:0,15,94	0/0:3,0:3:5.91:0,6,38	0/0:20,0:19:21.93:0,22,709	0/1:9,0:9:4.55:71,0,5	0/1:3,0:3:24.07:24,0,61	./.	1/1:1,0:1:3:26,3,0	1/1:3,0:3:3.92:40,4,0	1/1:8,0:7:9.26:53,9,0	0/1:4,0:4:0:1,0,0	1/1:7,0:7:11.33:77,11,0	1/1:6,0:6:11.16:73,11,0	1/1:4,0:4:11.88:82,12,0	0/0:8,0:8:19.54:0,20,320	0/0:9,0:9:21.07:0,21,482	0/0:10,0:10:20.99:0,21,385	0/1:6,0:6:8.25:54,0,8	1/1:3,0:3:2.97:20,3,0	1/1:5,0:5:10.72:69,11,0	0/0:5,0:5:9.50:0,10,208	0/1:4,0:4:9.40:39,0,9	1/1:3,0:3:0.87:2,1,0	1/1:2,0:2:5.99:49,6,0
chr10	11995253	.	CT	C	105.17	PASS	AB=0.933;AC=5;AF=0.096;AN=52;BaseQRankSum=1.869;DP=136;FS=2.336;HRun=1;HaplotypeScore=24.4562;InbreedingCoeff=-0.0270;MQ=59.32;MQ0=6;MQRankSum=-2.765;QD=3.51;ReadPosRankSum=-1.292;VQSLOD=-0.3073;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:6:9.02:0,9,115	0/0:2,0:1:2.94:0,3,18	0/0:21,1:6:4.24:0,4,210	0/0:14,0:7:9.02:0,9,104	0/1:3,0:3:0:0,0,0	0/0:2,0:2:6.02:0,6,67	./.	0/1:15,5:19:99:161,0,354	0/0:4,0:4:3.01:0,3,42	0/0:2,0:2:6.02:0,6,85	./.	0/0:1,0:1:2.96:0,3,19	0/0:2,0:2:3.01:0,3,34	0/0:4,0:3:2.20:0,2,17	1/1:2,0:2:0.89:2,1,0	0/0:3,0:3:5.04:0,5,53	0/0:5,0:5:8.99:0,9,97	0/0:2,0:2:2.96:0,3,19	0/1:5,0:5:27.40:27,0,101	0/0:8,0:8:21.07:0,21,313	0/0:8,1:9:4.49:0,4,252	0/0:3,0:3:6:0,6,63	0/0:3,0:3:5.61:0,6,45	0/0:2,0:2:2.96:0,3,19	0/0:3,0:3:5.50:0,6,54	0/0:2,0:2:4.26:0,4,40	0/0:1,0:1:3.01:0,3,42	0/0:1,0:1:3.01:0,3,40
chr10	11996365	.	TC	T	9019.35	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=12.021;DP=563;FS=7.435;HRun=4;HaplotypeScore=68.5933;InbreedingCoeff=0.9966;MQ=63.94;MQ0=1;MQRankSum=-1.125;QD=31.43;ReadPosRankSum=5.517;VQSLOD=5.0703;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,141,1970	1/1:0,5:5:15.05:180,15,0	0/0:25,0:22:60.14:0,60,802	0/0:26,0:24:69.22:0,69,936	1/1:0,13:13:36.11:432,36,0	0/0:19,0:19:54.15:0,54,721	0/0:29,0:29:87.28:0,87,1201	0/0:32,0:32:87.29:0,87,1217	1/1:0,10:10:30.09:360,30,0	1/1:3,16:19:45.11:515,45,0	1/1:0,10:10:27.08:324,27,0	1/1:1,16:17:42.13:504,42,0	1/1:0,11:11:33.10:396,33,0	1/1:2,9:11:27.05:323,27,0	1/1:2,22:24:60.18:719,60,0	1/1:0,22:22:60.18:720,60,0	1/1:2,26:28:75.23:896,75,0	1/1:1,15:16:45.10:524,45,0	0/0:17,0:17:48.13:0,48,629	0/0:24,0:24:66.21:0,66,908	0/0:35,0:35:99:0,99,1342	1/1:2,14:16:36.11:431,36,0	1/1:0,16:16:42.08:503,42,0	1/1:1,21:22:60.18:720,60,0	0/0:15,0:15:42.13:0,42,571	1/1:1,17:18:48.15:574,48,0	1/1:0,20:20:54.17:648,54,0	1/1:0,9:9:21.06:252,21,0
chr10	11996916	.	T	TTTTATTTTA	1875.01	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=1.509;DP=609;FS=3.683;HRun=0;HaplotypeScore=162.5686;InbreedingCoeff=0.9777;MQ=63.00;MQ0=1;MQRankSum=-6.063;QD=78.13;ReadPosRankSum=2.346;VQSLOD=3.8928;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:84.22:0,84,2209	0/0:9,0:9:24.08:0,24,621	0/0:19,0:16:45.15:0,45,1134	0/0:19,0:14:25.84:0,26,554	0/0:28,0:28:81.27:0,81,2379	1/1:1,10:13:30.10:1422,30,0	1/1:0,6:11:12.04:570,12,0	0/0:20,0:20:54.15:0,54,1511	0/0:23,0:23:66.23:0,66,1906	0/0:15,0:15:45.14:0,45,1158	0/0:21,0:21:63.21:0,63,1860	0/0:26,0:26:77.61:0,78,2013	0/0:25,0:25:66.21:0,66,1858	0/0:25,0:25:72.23:0,72,1969	0/0:27,0:27:75.25:0,75,1939	0/0:25,0:25:72.21:0,72,1903	0/0:39,0:39:99:0,111,3262	0/0:21,0:21:48.15:0,48,1362	0/0:31,0:31:81.20:0,81,1981	0/0:27,0:27:75.26:0,75,2136	0/0:17,0:17:51.17:0,51,1497	0/0:25,0:25:63.16:0,63,1724	0/0:18,0:18:51.18:0,51,1532	0/0:21,0:21:63.20:0,63,1797	0/0:13,0:13:36.11:0,36,1013	0/0:23,0:23:57.20:0,57,1740	0/0:26,0:26:72.25:0,72,2136	0/0:10,0:10:18.05:0,18,373
chr10	11997266	.	CCACA	C	7665.56	PASS	AB=0.876;AC=37;AF=0.685;AN=54;BaseQRankSum=1.206;DP=688;FS=18.280;HRun=0;HaplotypeScore=135.8243;InbreedingCoeff=0.7237;MQ=64.18;MQ0=21;MQRankSum=-0.221;QD=17.46;ReadPosRankSum=4.184;VQSLOD=3.3704;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,2:43:32.98:0,33,1440	1/1:8,8:16:18.04:261,18,0	0/0:41,0:21:2.84:0,3,14	./.	1/1:9,11:22:27.56:429,28,0	0/1:22,0:22:13.22:13,0,439	0/1:23,0:24:30.67:31,0,474	0/0:21,0:23:24.07:0,24,377	1/1:10,19:29:45.14:675,45,0	1/1:10,8:24:27.68:488,28,0	1/1:6,9:16:9.03:143,9,0	1/1:7,10:18:36.11:532,36,0	1/1:8,5:14:18.05:266,18,0	1/1:14,11:28:39.12:573,39,0	1/1:11,15:27:41.11:558,41,0	1/1:15,12:27:38.79:543,39,0	1/1:10,13:24:8.38:387,8,0	1/1:4,11:15:27.09:409,27,0	0/0:13,0:14:23.67:0,24,412	0/0:13,0:25:33.57:0,34,562	0/0:26,0:37:41.88:0,42,763	0/1:12,8:24:1.32:223,0,1	1/1:9,9:17:27.09:417,27,0	1/1:12,15:27:45.15:695,45,0	0/0:22,0:23:41.46:0,41,647	1/1:11,9:20:30.06:423,30,0	1/1:14,8:21:18.02:239,18,0	1/1:4,7:12:24.08:361,24,0
chr10	11997303	.	CCA	C	1606.25	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-2.134;DP=775;FS=1.182;HRun=0;HaplotypeScore=141.0885;InbreedingCoeff=0.9977;MQ=56.30;MQ0=46;MQRankSum=0.746;QD=28.68;ReadPosRankSum=-1.321;VQSLOD=4.2569;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:52:99:0,114,1692	0/0:12,0:10:23.83:0,24,279	0/0:35,0:15:32.98:0,33,591	0/0:46,0:18:41.80:0,42,589	0/0:27,0:24:48.13:0,48,597	1/1:19,9:27:63.11:804,63,0	1/1:24,3:28:72.12:924,72,0	0/0:34,0:31:59.25:0,59,1162	0/0:32,0:30:72.15:0,72,860	0/0:31,0:28:70.87:0,71,869	0/0:18,0:18:30.07:0,30,420	0/0:25,0:25:71.83:0,72,891	0/0:18,0:16:41.75:0,42,512	0/0:24,0:24:54.07:0,54,625	0/0:28,0:27:63.10:0,63,756	0/0:27,0:25:61.69:0,62,758	0/0:28,0:27:58.55:0,59,699	0/0:18,0:16:42.08:0,42,485	0/0:31,0:26:66.06:0,66,936	0/0:27,0:26:61.75:0,62,863	0/0:46,0:45:84.15:0,84,1291	0/0:26,0:26:59.92:0,60,761	0/0:23,0:21:57.17:0,57,758	0/0:28,0:27:55.04:0,55,751	0/0:25,0:23:60.22:0,60,947	0/0:25,0:22:62.09:0,62,879	0/0:19,0:15:32.24:0,32,392	0/0:12,0:11:26.85:0,27,257
chr10	11997389	.	GAA	G	1701.54	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.185;DP=795;FS=2.867;HRun=3;HaplotypeScore=93.2696;InbreedingCoeff=0.9998;MQ=88.43;MQ0=1;MQRankSum=-2.695;QD=32.10;ReadPosRankSum=-0.499;VQSLOD=3.2630;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,155,2857	0/0:12,0:12:36.12:0,36,689	0/0:28,0:28:84.24:0,84,1478	0/0:37,0:37:99:0,111,1847	0/0:28,0:28:83.94:0,84,1510	1/1:3,25:28:57.19:873,57,0	1/1:0,25:25:63.21:951,63,0	0/0:29,0:29:87.29:0,87,1612	0/0:34,0:34:99:0,102,1950	0/0:26,0:26:78.27:0,78,1507	0/0:20,0:20:60.19:0,60,1098	0/0:23,0:23:69.23:0,69,1294	0/0:27,0:27:81.27:0,81,1519	0/0:27,0:27:81.27:0,81,1534	0/0:35,0:35:99:0,105,1980	0/0:27,0:27:81.27:0,81,1533	0/0:27,0:26:75.23:0,75,1352	0/0:14,0:14:33.07:0,33,600	0/0:20,0:20:60.18:0,60,1053	0/0:34,0:34:99:0,102,1901	0/0:41,0:41:99:0,123,2320	0/0:20,0:20:60.21:0,60,1150	0/0:27,0:27:81.27:0,81,1530	0/0:28,0:28:84.28:0,84,1573	0/0:36,0:36:99:0,105,1991	0/0:32,0:32:96.32:0,96,1818	0/0:37,0:37:99:0,111,2140	0/0:21,0:21:63.22:0,63,1217
chr10	11997810	.	A	AAAAG	24020.10	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-9.180;DP=737;FS=4.476;HRun=0;HaplotypeScore=104.0750;InbreedingCoeff=0.9981;MQ=64.12;MQ0=2;MQRankSum=-2.870;QD=48.14;ReadPosRankSum=5.772;VQSLOD=5.6122;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:72.05:0,72,1051	1/1:1,6:7:18.02:401,18,0	0/0:36,0:26:47.03:0,47,704	0/0:27,0:23:54.96:0,55,891	1/1:3,28:31:75.13:1611,75,0	1/1:1,19:20:42.14:1078,42,0	1/1:3,12:16:24.08:583,24,0	0/0:37,0:37:72.91:0,73,1262	1/1:5,16:22:36.08:872,36,0	1/1:2,24:27:78.23:1703,78,0	1/1:3,19:22:51.04:1069,51,0	1/1:3,25:30:51.18:1299,51,0	1/1:6,17:24:48.16:1219,48,0	1/1:5,24:29:48.16:1231,48,0	1/1:4,26:33:48.16:1199,48,0	1/1:1,18:19:32.89:839,33,0	1/1:2,28:32:33.85:1370,34,0	1/1:2,19:22:33.11:852,33,0	0/0:21,0:21:46.44:0,46,800	0/0:30,0:30:77.95:0,78,1219	0/0:29,0:29:78.24:0,78,1271	1/1:3,31:34:87.08:2011,87,0	1/1:3,19:22:39.08:924,39,0	1/1:2,18:20:39.13:958,39,0	0/0:27,0:27:72.22:0,72,1201	1/1:5,31:37:99:2234,102,0	1/1:3,25:29:57.20:1469,57,0	1/1:7,16:22:47.96:1099,48,0
chr10	11998278	.	T	TC	17542.23	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=15.780;DP=564;FS=4.762;HRun=0;HaplotypeScore=146.3464;InbreedingCoeff=0.9984;MQ=67.80;MQ0=0;MQRankSum=-5.144;QD=43.21;ReadPosRankSum=3.898;VQSLOD=4.0154;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:81.25:0,81,1113	1/1:0,7:7:21.07:334,21,0	0/0:12,0:11:30.10:0,30,420	0/0:9,0:9:27.07:0,27,333	1/1:4,26:30:69.24:1096,69,0	1/1:1,24:24:72.25:1147,72,0	1/1:1,13:14:39.13:621,39,0	0/0:34,0:34:99:0,102,1382	1/1:3,21:24:66.22:1030,66,0	1/1:2,37:38:99:1750,111,0	1/1:1,18:19:54.01:825,54,0	1/1:2,19:21:60.20:949,60,0	1/1:4,19:23:51.17:812,51,0	1/1:1,22:23:63.21:1001,63,0	1/1:1,15:15:45.15:705,45,0	1/1:2,19:21:54.18:859,54,0	1/1:7,17:24:63.20:965,63,0	1/1:0,12:12:33.11:524,33,0	0/0:22,0:22:66.20:0,66,905	0/0:21,0:21:63.21:0,63,881	0/0:23,0:23:69.21:0,69,947	1/1:3,19:22:57.18:884,57,0	1/1:0,21:21:60.20:955,60,0	1/1:0,8:8:24.08:383,24,0	0/0:9,0:9:27.09:0,27,378	1/1:4,20:24:72.24:1125,72,0	1/1:0,23:23:69.24:1099,69,0	1/1:0,10:10:30.10:479,30,0
chr10	11998320	.	TA	T	8658.61	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=11.158;DP=523;FS=0.000;HRun=9;HaplotypeScore=113.7984;InbreedingCoeff=0.9792;MQ=63.64;MQ0=0;MQRankSum=-12.909;QD=22.91;ReadPosRankSum=5.848;VQSLOD=3.8286;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,114,1278	1/1:0,5:5:15.01:137,15,0	0/0:13,0:14:28.35:0,28,291	0/0:14,0:13:12.23:0,12,175	1/1:8,25:33:62.96:576,63,0	1/1:4,24:28:72.04:658,72,0	1/1:4,14:18:38.97:348,39,0	0/0:29,0:29:72.17:0,72,802	1/1:1,17:18:51.03:466,51,0	1/1:1,27:29:83.08:747,83,0	1/1:6,17:23:50.93:449,51,0	1/1:3,18:21:54.03:493,54,0	1/1:1,12:13:39.02:356,39,0	1/1:1,24:25:68.99:622,69,0	1/1:1,14:14:41.95:374,42,0	1/1:3,14:17:41.95:375,42,0	1/1:2,17:19:44.94:401,45,0	1/1:0,6:6:18.01:164,18,0	0/0:10,0:10:27.07:0,27,302	0/0:12,0:13:36.11:0,36,414	0/0:10,0:11:23.90:0,24,257	1/1:4,25:29:74.99:677,75,0	1/1:2,12:14:32.98:295,33,0	1/1:2,3:5:9:82,9,0	0/0:14,0:14:36.10:0,36,407	1/1:2,27:29:83.98:754,84,0	1/1:3,20:23:57.02:520,57,0	1/1:3,5:8:18:165,18,0
chr10	11998723	.	GT	G	1210.99	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.219;DP=763;FS=1.177;HRun=8;HaplotypeScore=75.6983;InbreedingCoeff=0.9958;MQ=65.81;MQ0=0;MQRankSum=-0.151;QD=23.29;ReadPosRankSum=1.026;VQSLOD=4.3141;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,114,1377	0/0:6,0:6:18.06:0,18,217	0/0:22,0:22:54.14:0,54,622	0/0:19,0:18:39.09:0,39,445	0/0:46,0:46:99:0,126,1484	1/1:2,24:25:72.12:695,72,0	1/1:3,23:26:66.10:637,66,0	0/0:38,0:38:99:0,102,1212	0/0:23,0:23:66.18:0,66,777	0/0:44,0:44:99:0,114,1356	0/0:19,0:19:45.14:0,45,543	0/0:19,0:19:54.15:0,54,642	0/0:24,0:24:57.17:0,57,678	0/0:20,0:20:54.16:0,54,642	0/0:34,0:34:99:0,99,1196	0/0:24,0:24:72.21:0,72,860	0/0:36,0:36:96.27:0,96,1137	0/0:36,0:36:93.24:0,93,1095	0/0:18,0:18:42.11:0,42,487	0/0:18,0:18:48.15:0,48,580	0/0:24,0:24:63.19:0,63,761	0/0:29,0:29:78.23:0,78,932	0/0:22,0:22:63.19:0,63,751	0/0:37,0:37:99:0,105,1235	0/0:23,0:23:63.11:0,63,718	0/0:30,0:30:72.18:0,72,853	0/0:41,0:40:99:0,111,1299	0/0:14,0:14:42.05:0,42,466
chr10	11998933	.	AGTG	A	1872.23	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.086;DP=676;FS=0.000;HRun=0;HaplotypeScore=92.7622;InbreedingCoeff=0.9998;MQ=88.59;MQ0=0;MQRankSum=-3.626;QD=38.21;ReadPosRankSum=3.065;VQSLOD=4.3376;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:84.29:0,84,1831	0/0:14,0:14:42.12:0,42,921	0/0:32,0:32:84.29:0,84,1813	0/0:22,0:22:60.17:0,60,1233	0/0:35,0:35:99:0,102,2304	1/1:0,25:25:57.20:972,57,0	1/1:0,24:24:60.21:1022,60,0	0/0:41,0:41:99:0,117,2596	0/0:19,0:19:54.19:0,54,1245	0/0:26,0:26:78.27:0,78,1772	0/0:18,0:18:54.17:0,54,1198	0/0:25,0:25:75.26:0,75,1667	0/0:17,0:17:51.18:0,51,1174	0/0:25,0:25:72.25:0,72,1620	0/0:32,0:32:93.31:0,93,2082	0/0:19,0:19:54.19:0,54,1245	0/0:19,0:19:48.16:0,48,1082	0/0:18,0:18:48.16:0,48,1083	0/0:28,0:28:72.25:0,72,1564	0/0:30,0:30:87.27:0,87,1880	0/0:18,0:18:54.18:0,54,1190	0/0:24,0:24:72.23:0,72,1614	0/0:22,0:22:63.18:0,63,1318	0/0:21,0:21:63.22:0,63,1436	0/0:25,0:25:72.23:0,72,1574	0/0:34,0:34:96.32:0,96,2155	0/0:24,0:23:72.25:0,72,1656	0/0:11,0:11:33.11:0,33,761
chr10	11999132	.	G	GC	11084.78	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-13.845;DP=579;FS=1.862;HRun=4;HaplotypeScore=58.6852;InbreedingCoeff=0.9980;MQ=89.25;MQ0=0;MQRankSum=-5.048;QD=33.39;ReadPosRankSum=4.407;VQSLOD=5.3522;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,102,1154	1/1:0,11:11:33.11:443,33,0	0/0:25,0:25:69.15:0,69,757	0/0:28,0:28:72.14:0,72,790	1/1:2,17:19:45.11:594,45,0	0/0:19,0:19:51.06:0,51,548	0/0:13,0:13:33.08:0,33,366	0/0:22,0:22:57.15:0,57,631	1/1:2,18:20:42.14:564,42,0	1/1:2,25:27:75.23:1007,75,0	1/1:4,9:13:24.05:295,24,0	1/1:3,15:18:45.15:610,45,0	1/1:1,20:21:48.16:656,48,0	1/1:3,21:24:57.19:779,57,0	1/1:2,15:17:42.14:575,42,0	1/1:1,15:16:39.13:533,39,0	1/1:2,30:32:84.28:1149,84,0	1/1:0,24:24:63.21:861,63,0	0/0:16,0:16:30.08:0,30,340	0/0:23,0:23:65.48:0,65,705	0/0:38,0:38:99:0,107,1187	1/1:0,15:15:33.10:450,33,0	1/1:1,7:8:18.06:246,18,0	1/1:4,17:21:51.16:684,51,0	0/0:24,0:24:69.20:0,69,782	1/1:0,16:16:45.15:614,45,0	1/1:2,19:21:51.17:696,51,0	1/1:1,8:9:24.08:328,24,0
chr10	11999894	.	CAGTT	C	18393.76	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=14.972;DP=634;FS=8.651;HRun=0;HaplotypeScore=118.6489;InbreedingCoeff=0.9970;MQ=88.67;MQ0=0;MQRankSum=-6.091;QD=47.53;ReadPosRankSum=8.015;VQSLOD=4.8727;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,105,2707	1/1:0,10:10:27.09:522,27,0	0/0:30,0:30:84.29:0,84,2226	0/0:20,0:20:34.26:0,34,1282	1/1:2,12:14:20.74:406,21,0	0/0:23,0:23:69.24:0,69,1835	0/0:21,0:21:60.21:0,60,1606	0/0:31,0:31:93.31:0,93,2442	1/1:2,26:28:66.23:1277,66,0	1/1:1,15:16:45.15:862,45,0	1/1:0,7:7:18.06:348,18,0	1/1:3,27:30:72.25:1392,72,0	1/1:0,36:36:99:1917,99,0	1/1:1,24:25:69.24:1336,69,0	1/1:1,37:38:96.30:1823,96,0	1/1:2,28:30:81.28:1569,81,0	1/1:0,21:21:54.18:1046,54,0	1/1:1,14:15:33.11:640,33,0	0/0:14,0:14:36.11:0,36,931	0/0:18,0:18:51.18:0,51,1358	0/0:41,0:40:99:0,114,2909	1/1:0,12:12:21.07:406,21,0	1/1:2,13:15:23.95:463,24,0	1/1:2,17:19:35.47:697,35,0	0/0:14,0:14:42.14:0,42,1130	1/1:0,21:21:63.22:1194,63,0	1/1:0,30:30:81.28:1566,81,0	1/1:0,20:20:48.16:929,48,0
chr10	12000563	.	G	GT	9527.67	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=7.518;DP=584;FS=2.823;HRun=4;HaplotypeScore=68.7141;InbreedingCoeff=0.9485;MQ=46.20;MQ0=123;MQRankSum=-2.286;QD=26.32;ReadPosRankSum=3.091;VQSLOD=4.1389;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:27:39.10:0,39,431	1/1:0,12:9:27.09:369,27,0	0/0:16,0:4:5.97:0,6,52	0/0:16,0:1:2.97:0,3,20	1/1:3,28:28:57.14:739,57,0	0/0:12,0:11:12.03:0,12,134	0/0:14,0:9:24.07:0,24,269	0/0:28,0:21:54.14:0,54,602	1/1:1,19:17:45.15:614,45,0	1/1:2,25:23:63.20:840,63,0	1/1:1,17:17:39.13:517,39,0	1/1:1,21:18:33.11:450,33,0	1/1:1,14:12:30.10:410,30,0	1/1:0,20:18:42.14:569,42,0	1/1:1,23:23:60.16:799,60,0	1/1:0,16:13:39.13:533,39,0	1/1:2,18:17:18.06:241,18,0	1/1:3,14:13:30.10:403,30,0	0/0:22,0:19:48.14:0,48,544	0/0:31,0:27:72.20:0,72,815	0/0:22,0:17:32.83:0,33,374	1/1:2,16:15:39.09:512,39,0	1/1:2,19:18:36.09:492,36,0	1/1:1,13:12:15.05:205,15,0	0/0:25,0:14:33.09:0,33,374	1/1:2,24:23:63.17:811,63,0	1/1:1,24:22:51.17:697,51,0	1/1:1,15:12:24.08:328,24,0
chr10	12007765	.	T	TGA	100.46	PASS	AB=1.000;AC=6;AF=0.375;AN=16;BaseQRankSum=4.679;DP=162;FS=5.764;HRun=0;HaplotypeScore=65.7155;MQ=64.72;MQ0=46;MQRankSum=-0.315;QD=2.87;ReadPosRankSum=-2.570;VQSLOD=0.2886;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,129,2104	./.	0/0:12,0:8:18.06:0,18,280	0/0:5,0:5:12.04:0,12,196	./.	./.	./.	0/1:18,0:9:31.45:82,0,31	./.	0/1:12,0:9:1.64:14,0,2	./.	./.	./.	./.	1/1:1,1:1:3.01:48,3,0	./.	./.	./.	./.	./.	1/1:2,1:1:3.01:46,3,0	./.	./.	./.	0/0:21,0:19:57.19:0,57,925	./.	./.	./.
chr10	12007906	.	CCA	C	1687.83	PASS	AB=1.000;AC=36;AF=0.643;AN=56;BaseQRankSum=6.100;DP=373;FS=32.158;HRun=0;HaplotypeScore=52.5196;InbreedingCoeff=0.6589;MQ=83.78;MQ0=0;MQRankSum=-3.468;QD=7.34;ReadPosRankSum=-2.145;VQSLOD=1.2046;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:83.53:0,84,1191	1/1:6,0:6:11.56:79,12,0	0/0:16,0:16:45.05:0,45,616	0/0:15,0:15:33.05:0,33,491	1/1:6,0:6:5.19:27,5,0	1/1:1,11:12:12.04:171,12,0	1/1:3,16:19:30.03:395,30,0	0/0:16,0:16:38.77:0,39,523	1/1:10,0:10:2.60:10,3,0	1/1:15,0:15:27.81:222,28,0	1/1:3,0:3:1.30:7,1,0	1/1:11,0:11:17.59:101,18,0	1/1:10,1:11:9.77:80,10,0	1/1:20,0:20:8.22:47,8,0	1/1:15,0:15:7.23:26,7,0	0/1:8,0:8:2.67:20,0,3	1/1:14,0:14:8.71:95,9,0	0/1:22,0:22:8.87:140,0,9	0/0:13,0:13:39.07:0,39,552	0/0:7,0:7:12.81:0,13,126	0/0:27,0:27:72.16:0,72,1158	0/1:8,0:8:0.01:0,0,0	1/1:5,0:5:3.89:29,4,0	1/1:19,0:19:8.20:65,8,0	0/0:16,0:16:25.08:0,25,504	1/1:8,0:8:21.41:170,21,0	0/1:12,0:11:0.43:88,0,0	1/1:6,0:6:13.70:104,14,0
chr10	12007907	.	CA	C	3179.74	PASS	AC=38;AF=0.704;AN=54;BaseQRankSum=2.201;DP=371;FS=85.434;HRun=1;HaplotypeScore=42.2252;InbreedingCoeff=0.8898;MQ=83.96;MQ0=0;MQRankSum=-1.983;QD=14.45;ReadPosRankSum=-2.576;VQSLOD=0.1428;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:77.35:0,77,896	1/1:4,2:6:17.97:162,18,0	0/0:16,0:16:45.01:0,45,496	0/0:15,0:15:31.47:0,31,401	1/1:0,6:6:5.98:59,6,0	1/1:11,1:12:11.86:79,12,0	1/1:18,1:19:29.40:192,29,0	0/0:16,0:16:38.63:0,39,384	1/1:1,9:10:3.01:42,3,0	1/1:0,14:14:29.92:245,30,0	1/1:2,1:3:9:90,9,0	1/1:9,2:11:32.85:280,33,0	1/1:12,0:12:23.93:197,24,0	1/1:1,19:20:8.63:100,9,0	1/1:0,15:15:8.24:91,8,0	1/1:5,2:7:20.26:212,20,0	1/1:9,5:14:36.51:402,37,0	1/1:18,4:22:56.82:503,57,0	0/0:13,0:13:38.34:0,38,418	0/0:7,0:7:12.80:0,13,104	0/0:28,0:28:72.08:0,72,905	./.	1/1:3,2:5:8.97:73,9,0	1/1:0,19:19:9:105,9,0	0/0:16,0:16:27.93:0,28,419	1/1:7,1:8:23.94:196,24,0	1/1:11,0:10:24.43:200,24,0	1/1:6,0:6:17.99:152,18,0
chr10	12008504	.	T	TGTGTCTGTATCTGCAA	14290.66	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=2.767;DP=532;FS=2.731;HRun=0;HaplotypeScore=225.4007;InbreedingCoeff=0.9461;MQ=68.25;MQ0=0;MQRankSum=-13.113;QD=148.86;ReadPosRankSum=-3.362;VQSLOD=4.3737;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:63.69:0,64,2876	0/0:8,0:8:24.07:0,24,938	0/0:13,0:10:10.71:0,11,338	0/0:7,0:7:5.09:0,5,154	0/0:24,0:24:72.25:0,72,3121	0/0:21,0:21:60.21:0,60,2527	0/0:14,0:14:39.12:0,39,1461	1/1:42,0:42:99:5790,111,0	0/0:15,0:15:42.13:0,42,1597	0/0:37,0:37:99:0,102,4020	0/0:22,0:22:66.21:0,66,2445	0/0:15,0:15:42.14:0,42,1823	0/0:15,0:15:39.13:0,39,1650	0/0:18,0:18:51.17:0,51,2121	0/0:26,0:26:75.26:0,75,3169	0/0:15,0:15:45.15:0,45,1988	0/0:23,0:23:63.22:0,63,2792	0/0:17,0:17:48.16:0,48,2075	1/1:14,6:20:57.19:3679,57,0	1/1:11,13:24:60.16:3866,60,0	1/1:7,3:10:12.04:956,12,0	0/0:12,0:12:36.11:0,36,1495	0/0:22,0:22:63.22:0,63,2948	0/0:21,0:21:60.21:0,60,2705	0/0:17,0:17:48.16:0,48,2290	0/0:30,0:30:90.30:0,90,3675	0/0:11,0:11:33.10:0,33,1201	0/0:11,0:11:30.10:0,30,1318
chr10	12008514	.	GA	G	2061.39	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=12.779;DP=511;FS=7.481;HRun=10;HaplotypeScore=71.1580;InbreedingCoeff=0.9340;MQ=62.35;MQ0=0;MQRankSum=-6.782;QD=18.24;ReadPosRankSum=-2.746;VQSLOD=3.2998;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:72.18:0,72,786	0/0:8,0:8:24.06:0,24,266	1/1:8,0:4:2.67:11,3,0	0/0:4,0:4:0.47:0,0,1	0/0:27,0:27:78.21:0,78,863	1/1:1,18:19:50.98:443,51,0	1/1:0,14:14:35.99:313,36,0	1/1:4,24:28:55.28:605,55,0	0/0:17,0:17:51.13:0,51,556	0/0:38,0:38:99:0,99,1092	0/0:27,0:27:75.16:0,75,816	0/0:15,0:15:39.10:0,39,427	0/0:13,0:13:36.10:0,36,398	0/0:19,0:19:48.12:0,48,525	0/0:25,0:25:72.17:0,72,780	0/0:15,0:15:42.10:0,42,457	0/0:25,0:25:69.17:0,69,754	0/0:17,0:17:48.11:0,48,521	1/1:5,12:17:35.97:312,36,0	1/1:2,19:21:30.66:437,31,0	1/1:0,6:6:14.99:129,15,0	0/0:11,0:11:27.06:0,27,290	0/0:20,0:21:56.98:0,57,607	0/0:20,0:20:51.14:0,51,564	0/0:19,0:19:45.04:0,45,467	0/0:28,0:28:80.48:0,80,851	0/0:13,0:13:36.09:0,36,390	0/0:10,0:10:27.07:0,27,298
chr10	12008631	.	G	GCACA	6290.59	PASS	AB=0.730;AC=41;AF=0.759;AN=54;BaseQRankSum=2.629;DP=531;FS=6.107;HRun=0;HaplotypeScore=110.2695;InbreedingCoeff=0.2138;MQ=71.17;MQ0=2;MQRankSum=0.719;QD=14.14;ReadPosRankSum=0.511;VQSLOD=3.7596;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:29:34.23:0,34,913	1/1:0,7:8:5.75:86,6,0	0/0:24,0:15:8.88:0,9,82	0/1:34,0:30:17.97:18,0,300	1/1:19,1:21:38.35:488,38,0	0/1:8,0:19:49.90:262,0,50	0/1:16,0:27:6.58:385,0,7	0/1:16,0:20:47.29:100,0,47	1/1:3,6:9:11.07:227,11,0	1/1:19,3:22:47.83:749,48,0	1/1:3,7:12:6.48:102,6,0	1/1:9,15:28:17.25:257,17,0	1/1:7,12:20:14.79:306,15,0	1/1:6,8:17:17.53:319,18,0	1/1:3,14:20:14.25:184,14,0	1/1:5,6:12:11.78:232,12,0	1/1:11,20:31:18.06:423,18,0	0/1:3,9:15:33.13:307,0,33	1/1:13,0:14:20.50:169,20,0	1/1:9,0:12:5.59:138,6,0	0/1:20,0:29:14.46:338,0,14	./.	1/1:8,7:17:8.77:159,9,0	1/1:8,12:22:14.33:261,14,0	0/0:18,0:20:45.08:0,45,653	0/1:8,11:20:5.76:627,0,6	1/1:3,7:11:9.93:106,10,0	1/1:2,0:2:3.01:46,3,0
chr10	12008651	.	ACG	A	2555.73	PASS	AB=0.923;AC=20;AF=0.357;AN=56;BaseQRankSum=-4.628;DP=516;FS=12.095;HRun=0;HaplotypeScore=103.5866;InbreedingCoeff=0.0448;MQ=58.63;MQ0=6;MQRankSum=-0.675;QD=9.03;ReadPosRankSum=-2.667;VQSLOD=1.8317;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:39.63:0,40,1132	0/1:10,0:10:0.81:1,0,53	0/0:19,0:7:9.01:0,9,81	0/1:22,1:17:7.63:8,0,347	0/1:13,7:20:5.36:360,0,5	0/1:21,0:21:46.75:101,0,47	1/1:30,0:30:7.44:345,7,0	0/1:16,1:16:34.18:179,0,34	0/0:9,0:10:17.87:0,18,140	0/1:15,8:23:47.92:390,0,48	0/1:9,0:9:10.99:49,0,11	0/0:25,0:24:8.74:0,9,184	0/0:15,0:15:6.34:0,6,152	0/0:18,0:18:6.44:0,6,193	0/0:21,0:20:11.28:0,11,140	1/1:8,0:8:11.74:88,12,0	0/0:30,0:30:38.79:0,39,325	0/0:19,0:19:11.87:0,12,179	1/1:17,0:15:30.90:228,31,0	1/1:10,2:11:15.30:166,15,0	0/1:32,3:33:34.15:370,0,34	0/0:11,0:11:5.95:0,6,42	0/1:10,0:10:3.12:3,0,37	0/1:21,1:22:21.31:21,0,154	0/0:20,0:20:6.12:0,6,677	0/1:19,1:20:99:383,0,151	0/0:13,0:13:4.45:0,4,114	0/1:5,1:6:33.56:34,0,77
chr10	12009640	.	AT	A	2150.24	PASS	AB=0.906;AC=11;AF=0.196;AN=56;BaseQRankSum=8.899;DP=655;FS=2.981;HRun=10;HaplotypeScore=62.0955;InbreedingCoeff=0.6761;MQ=61.32;MQ0=1;MQRankSum=0.204;QD=14.43;ReadPosRankSum=-3.120;VQSLOD=3.1902;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:20,1:21:25.08:0,25,505	0/0:9,0:9:18.05:0,18,199	0/1:10,1:7:11.54:12,0,88	0/1:6,2:6:18.07:18,0,53	0/0:39,0:40:96.08:0,96,1034	0/0:3,0:26:48.29:0,48,241	0/0:2,0:13:22.88:0,23,125	1/1:5,27:31:80.89:687,81,0	0/0:23,0:23:65.91:0,66,691	0/0:27,0:27:63.14:0,63,676	0/0:21,0:21:42.11:0,42,464	0/0:24,0:24:72.14:0,72,774	0/0:21,0:21:57.15:0,57,630	0/0:25,0:25:75.09:0,75,777	0/0:26,0:27:69.19:0,69,764	0/0:17,0:17:45.11:0,45,489	0/0:19,1:20:25.09:0,25,505	0/0:20,0:20:51.09:0,51,541	1/1:7,20:27:26.77:458,27,0	1/1:3,34:37:89.92:773,90,0	1/1:3,15:18:41.99:365,42,0	0/0:22,0:22:60.13:0,60,645	0/0:25,0:26:59.98:0,60,636	0/1:16,0:16:8.67:9,0,326	0/0:32,0:32:84.23:0,84,929	0/0:26,0:26:75.12:0,75,793	0/0:29,0:28:65.60:0,66,838	0/0:37,0:37:90.24:0,90,995
chr10	12010418	.	CATATATAT	C	1248.05	PASS	AB=0.769;AC=18;AF=0.600;AN=30;BaseQRankSum=-0.490;DP=184;FS=0.000;HRun=0;HaplotypeScore=56.3466;InbreedingCoeff=0.3418;MQ=74.32;MQ0=2;MQRankSum=-5.130;QD=18.09;ReadPosRankSum=3.270;VQSLOD=1.5459;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	1/1:1,0:2:2.90:16,3,0	./.	./.	./.	0/0:4,0:4:3.01:0,3,104	./.	0/0:40,0:40:45.13:0,45,946	1/1:2,1:3:3.01:76,3,0	1/1:3,1:4:3.01:76,3,0	./.	./.	1/1:5,1:7:6.02:132,6,0	./.	1/1:3,1:4:3.01:76,3,0	1/1:2,2:5:9.03:208,9,0	1/1:6,5:11:9.03:227,9,0	0/1:10,1:12:28.62:251,0,29	0/0:10,0:10:9.03:0,9,271	0/0:7,0:7:9.03:0,9,242	./.	./.	./.	./.	0/0:2,0:3:3.01:0,3,65	./.	1/1:2,0:4:5.61:66,6,0	0/1:9,6:17:69.88:241,0,70
chr10	12012797	.	AAGAAAAAAAAAG	A	873.58	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=3.190;DP=476;FS=7.276;HRun=0;HaplotypeScore=167.1928;InbreedingCoeff=0.2023;MQ=63.21;MQ0=17;MQRankSum=2.521;QD=18.20;ReadPosRankSum=1.142;VQSLOD=2.1703;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:80.89:0,81,3485	0/0:3,0:3:9.03:0,9,396	0/0:38,0:11:18.65:0,19,190	0/0:42,0:15:33.34:0,33,228	0/0:27,0:26:52.25:0,52,1677	0/0:27,0:26:67.02:0,67,2587	0/0:13,0:13:36.08:0,36,654	0/1:17,0:17:99:309,0,129	0/0:7,0:6:17.07:0,17,440	0/0:16,0:16:48.16:0,48,1517	0/0:21,0:20:25.95:0,26,1315	0/0:6,0:5:10.08:0,10,126	0/0:9,0:9:21.03:0,21,540	0/0:6,0:5:15.05:0,15,498	0/0:20,0:19:45.33:0,45,1369	0/0:13,0:13:35.54:0,36,959	0/0:24,0:24:59.47:0,59,1899	0/0:31,0:30:75.27:0,75,1971	0/1:13,0:11:67.33:247,0,67	1/1:4,9:13:4.97:381,5,0	0/1:5,0:5:49.60:50,0,77	0/0:2,0:1:3:0,3,25	0/0:6,0:6:11.82:0,12,312	0/0:10,0:10:23.82:0,24,582	0/0:25,0:25:46.53:0,47,2022	0/0:26,0:24:68.18:0,68,2187	0/0:14,0:14:36.97:0,37,987	0/0:14,0:12:36.11:0,36,1428
chr10	12013071	.	CAGCCCCGCCCACTGAGGTAGTT	C	1060.34	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=4.962;DP=481;FS=2.949;HRun=0;HaplotypeScore=262.7596;InbreedingCoeff=0.9195;MQ=90.07;MQ0=0;MQRankSum=0.411;QD=14.73;ReadPosRankSum=-1.589;VQSLOD=2.1564;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:87.30:0,87,5565	0/0:5,0:5:15.01:0,15,1186	0/0:24,0:23:16.69:0,17,919	0/0:20,0:20:13.40:0,13,962	0/0:9,0:9:21.03:0,21,1133	0/0:8,0:8:18.06:0,18,1332	0/0:24,0:24:57.18:0,57,3534	1/1:13,0:13:6.02:137,6,0	0/0:22,0:22:45.12:0,45,3352	0/0:11,0:11:18.06:0,18,1143	0/0:7,0:7:15.05:0,15,915	0/0:36,0:36:87.30:0,87,7105	0/0:19,0:19:36.12:0,36,2552	0/0:11,0:11:33.11:0,33,2953	0/0:15,0:15:33.11:0,33,1711	0/0:19,0:19:51.18:0,51,3601	0/0:16,0:16:45.15:0,45,3449	0/0:11,0:11:30.10:0,30,1868	1/1:6,11:17:30.10:587,30,0	1/1:8,6:14:9.03:247,9,0	1/1:28,0:28:15.05:236,15,0	0/0:11,0:11:24.08:0,24,1777	0/0:6,0:6:15.05:0,15,1010	0/0:33,0:33:66.18:0,66,4975	0/0:20,0:20:54.18:0,54,3457	0/0:17,0:17:33.11:0,33,2113	0/0:17,0:17:36.12:0,36,2480	0/0:15,0:15:42.07:0,42,3103
chr10	12014715	.	T	TACAC	2265.95	PASS	AB=0.872;AC=37;AF=0.804;AN=46;BaseQRankSum=-2.907;DP=406;FS=7.344;HRun=0;HaplotypeScore=68.8804;InbreedingCoeff=0.0556;MQ=64.79;MQ0=10;MQRankSum=1.655;QD=7.17;ReadPosRankSum=-1.318;VQSLOD=0.5866;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:24:1.98:2,0,210	1/1:3,0:3:3.01:49,3,0	./.	./.	0/1:9,0:10:18.92:19,0,41	0/1:7,0:17:24.26:24,0,119	0/0:20,0:26:6.01:0,6,56	1/1:26,0:26:5.98:59,6,0	1/1:17,0:17:9.50:139,10,0	./.	./.	1/1:8,3:17:3.48:71,3,0	1/1:8,0:8:8.97:92,9,0	1/1:10,0:10:6.01:74,6,0	1/1:8,0:8:3.90:45,4,0	0/0:6,0:6:3.01:0,3,47	0/1:18,11:30:26.95:268,0,27	0/1:9,10:20:25.49:359,0,25	1/1:11,0:11:9.01:106,9,0	1/1:6,0:6:2.99:24,3,0	1/1:23,11:33:3.01:71,3,0	./.	1/1:4,0:4:3:25,3,0	1/1:14,4:20:3.01:71,3,0	1/1:1,5:8:3.01:71,3,0	1/1:6,5:13:27.02:345,27,0	1/1:10,0:9:16.28:197,16,0	1/1:14,1:17:26.24:285,26,0
chr10	12014831	.	A	AT	1709.42	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-8.370;DP=333;FS=8.153;HRun=6;HaplotypeScore=33.5503;InbreedingCoeff=0.8462;MQ=62.83;MQ0=1;MQRankSum=-0.273;QD=28.49;ReadPosRankSum=-3.180;VQSLOD=2.1680;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:66.11:0,66,662	0/0:6,0:6:15.03:0,15,153	0/0:7,0:4:5.27:0,5,30	0/0:9,0:3:2.95:0,3,19	0/0:12,0:12:33.07:0,33,337	0/0:24,0:24:72.16:0,72,734	0/0:15,0:15:45.06:0,45,448	1/1:4,30:34:70.14:1084,70,0	0/0:11,0:11:30.05:0,30,299	0/0:13,0:13:36.08:0,36,367	0/0:6,0:6:15.03:0,15,153	0/0:5,0:5:12.03:0,12,122	0/0:7,0:7:12.03:0,12,122	0/0:6,0:6:12.01:0,12,116	0/0:9,0:9:21.05:0,21,214	0/0:5,0:5:15.03:0,15,149	0/0:31,0:31:87.20:0,87,887	0/0:17,0:17:39.07:0,39,391	1/1:0,8:8:24.07:291,24,0	1/1:1,6:7:15.05:189,15,0	1/1:2,9:11:24.08:302,24,0	0/0:6,0:6:18.02:0,18,170	0/0:2,0:2:6.01:0,6,61	0/0:5,0:5:12.03:0,12,122	0/0:20,0:20:54.10:0,54,539	0/0:16,0:16:39.08:0,39,398	0/0:8,0:8:17.17:0,17,169	0/0:11,0:11:33.08:0,33,337
chr10	12015334	.	G	GTTTT	13305.39	PASS	AB=0.661;AC=43;AF=0.768;AN=56;BaseQRankSum=-1.084;DP=666;FS=19.010;HRun=11;HaplotypeScore=126.4615;InbreedingCoeff=0.8400;MQ=59.16;MQ0=5;MQRankSum=-8.541;QD=27.32;ReadPosRankSum=-4.729;VQSLOD=0.5854;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:53:92.79:0,93,1432	1/1:4,2:6:6.02:139,6,0	0/0:25,0:15:36.07:0,36,430	0/0:22,0:16:15.17:0,15,198	1/1:7,17:28:57.58:1008,58,0	0/0:5,0:25:7.24:0,7,69	0/0:8,0:25:5.84:0,6,101	0/1:20,0:36:10.93:351,0,11	1/1:6,13:18:24.08:505,24,0	1/1:17,3:20:42.45:563,42,0	1/1:8,2:21:36.08:641,36,0	1/1:4,9:15:27.05:531,27,0	1/1:8,13:21:27.09:557,27,0	1/1:15,8:22:60.34:912,60,0	1/1:8,11:19:36.12:746,36,0	1/1:13,11:25:56.99:1013,57,0	1/1:8,11:22:18.53:306,19,0	1/1:6,17:25:37.93:770,38,0	1/1:14,0:12:24.85:329,25,0	1/1:4,0:20:21.35:321,21,0	1/1:11,2:20:17.31:281,17,0	1/1:8,3:12:28.03:447,28,0	1/1:17,4:22:51.61:741,52,0	1/1:8,17:26:27.09:602,27,0	0/0:28,0:29:75.19:0,75,968	1/1:12,15:28:63.41:1080,63,0	1/1:8,22:32:48.60:962,49,0	1/1:5,10:18:24.08:501,24,0
chr10	12016074	.	T	TG	23545.35	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-14.815;DP=742;FS=1.433;HRun=1;HaplotypeScore=67.4890;InbreedingCoeff=0.9998;MQ=78.07;MQ0=0;MQRankSum=-5.653;QD=41.16;ReadPosRankSum=3.512;VQSLOD=5.5031;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,163,2085	1/1:1,11:12:30.10:450,30,0	0/0:21,0:21:60.13:0,60,734	0/0:23,0:23:63.15:0,63,762	1/1:0,17:17:51.17:764,51,0	0/0:27,0:27:78.25:0,78,1012	0/0:28,0:28:81.23:0,81,1022	1/1:1,26:27:78.26:1168,78,0	1/1:0,31:31:87.29:1303,87,0	1/1:0,28:28:81.21:1190,81,0	1/1:0,15:15:39.09:559,39,0	1/1:0,27:27:66.22:989,66,0	1/1:0,28:28:78.26:1168,78,0	1/1:0,26:26:66.22:989,66,0	1/1:0,41:41:99:1708,114,0	1/1:0,24:24:69.23:1034,69,0	1/1:1,42:42:99:1844,123,0	1/1:1,32:33:90.30:1349,90,0	1/1:2,20:22:66.20:965,66,0	1/1:0,15:15:45.15:673,45,0	1/1:1,55:56:99:2203,147,0	1/1:2,14:16:36.12:539,36,0	1/1:4,13:17:39.12:566,39,0	1/1:0,28:28:81.27:1214,81,0	0/0:16,0:16:48.16:0,48,623	1/1:1,30:31:90.25:1304,90,0	1/1:0,21:22:66.22:982,66,0	1/1:0,13:13:39.13:583,39,0
chr10	12016201	.	TG	T	13668.02	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=9.747;DP=630;FS=11.320;HRun=6;HaplotypeScore=78.5703;InbreedingCoeff=0.9991;MQ=75.85;MQ0=0;MQRankSum=-4.526;QD=27.34;ReadPosRankSum=3.060;VQSLOD=4.7942;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:93.30:0,93,1223	1/1:0,9:9:24.06:258,24,0	0/0:18,0:18:45.10:0,45,547	0/0:18,0:18:45.13:0,45,545	1/1:2,20:22:57.14:611,57,0	0/0:15,0:15:39.13:0,39,509	0/0:31,0:31:81.26:0,81,1065	1/1:3,20:23:60.15:645,60,0	1/1:4,29:33:69.17:742,69,0	1/1:6,30:36:87.19:920,87,0	1/1:1,14:15:42.11:451,42,0	1/1:0,18:18:48.12:515,48,0	1/1:0,15:15:39.10:419,39,0	1/1:0,17:17:51.13:548,51,0	1/1:0,24:24:63.16:677,63,0	1/1:2,22:24:62.70:677,63,0	1/1:0,28:28:78.20:838,78,0	1/1:5,18:23:63.16:677,63,0	1/1:2,29:31:81.18:857,81,0	1/1:1,15:16:42.10:450,42,0	1/1:4,49:53:99:1419,132,0	1/1:1,16:17:39.10:419,39,0	1/1:2,14:16:39.10:416,39,0	1/1:4,20:24:51.13:548,51,0	0/0:15,0:14:42.14:0,42,552	1/1:2,21:23:63.16:677,63,0	1/1:0,21:21:60.15:644,60,0	1/1:4,8:12:24.06:258,24,0
chr10	12016506	.	GCT	G	54.16	PASS	AB=0.851;AC=14;AF=0.250;AN=56;BaseQRankSum=8.285;DP=313;FS=61.361;HRun=0;HaplotypeScore=48.8306;InbreedingCoeff=-0.1107;MQ=58.72;MQ0=15;MQRankSum=-5.602;QD=0.62;ReadPosRankSum=1.679;VQSLOD=-0.5901;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,2:16:24.45:0,24,299	0/0:5,0:5:14.87:0,15,110	0/0:54,0:16:5.03:0,5,299	0/0:27,0:8:10.20:0,10,90	0/1:5,1:8:9.35:9,0,50	0/0:7,0:7:8.87:0,9,64	0/0:8,1:8:17.19:0,17,169	0/0:26,0:26:74.31:0,74,604	0/1:5,0:7:29.85:30,0,48	0/1:11,0:12:12.36:12,0,111	0/0:5,0:5:9.13:0,9,74	0/1:6,2:8:38.51:47,0,39	0/1:5,1:6:7.58:8,0,33	0/0:7,0:7:9.04:0,9,115	0/0:7,0:7:17.41:0,17,112	0/0:6,0:6:7.02:0,7,92	0/1:10,0:11:2.96:3,0,80	0/0:17,0:16:16.25:0,16,183	0/0:12,0:11:6.98:0,7,191	1/1:4,0:3:1.39:3,1,0	0/0:5,0:5:11.75:0,12,77	0/1:1,1:2:13.01:15,0,13	0/1:6,0:5:16.69:17,0,60	0/0:8,1:10:20.46:0,20,128	0/1:9,0:9:11.05:11,0,89	0/1:8,0:9:30.24:30,0,46	0/0:10,0:10:12.73:0,13,117	1/1:4,0:4:0.93:5,1,0
chr10	12016582	.	AT	A	3195.17	PASS	AB=0.917;AC=45;AF=0.804;AN=56;BaseQRankSum=1.526;DP=206;FS=1.039;HRun=10;HaplotypeScore=31.4149;InbreedingCoeff=0.7531;MQ=76.64;MQ0=0;MQRankSum=-0.633;QD=18.91;ReadPosRankSum=1.953;VQSLOD=3.6922;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:8:24.05:0,24,256	1/1:0,5:5:15:130,15,0	0/1:10,1:7:13.13:13,0,88	0/0:8,0:7:7.35:0,7,92	1/1:2,8:10:23.99:208,24,0	0/0:5,0:5:12.03:0,12,133	0/0:7,0:7:15.04:0,15,166	1/1:4,9:11:26.99:234,27,0	1/1:0,7:7:21:182,21,0	1/1:1,10:11:29.99:260,30,0	1/1:1,8:9:23.99:208,24,0	1/1:0,3:3:9:78,9,0	1/1:2,6:8:18:156,18,0	1/1:0,5:5:15:130,15,0	1/1:2,3:5:6:52,6,0	1/1:0,8:8:24:208,24,0	1/1:1,5:6:14.99:130,15,0	1/1:0,8:9:23.03:188,23,0	1/1:2,4:6:12:104,12,0	1/1:0,8:8:24:208,24,0	1/1:0,4:4:9:78,9,0	1/1:1,4:5:12:104,12,0	1/1:1,5:6:12:104,12,0	1/1:1,5:6:17.99:154,18,0	0/0:9,0:9:24.05:0,24,257	1/1:2,10:12:29.97:256,30,0	1/1:3,7:10:17.99:156,18,0	1/1:0,2:2:3:26,3,0
chr10	12017085	.	CT	C	650.84	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=-1.444;DP=484;FS=0.000;HRun=11;HaplotypeScore=73.2606;InbreedingCoeff=0.6679;MQ=62.80;MQ0=7;MQRankSum=0.257;QD=8.80;ReadPosRankSum=2.438;VQSLOD=2.5962;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,2:23:24.25:0,24,407	0/0:2,0:5:8.66:0,9,47	0/1:24,0:12:11.59:12,0,91	0/0:17,0:10:5.44:0,5,28	0/0:3,0:9:19.92:0,20,106	1/1:3,20:23:41.85:337,42,0	1/1:1,25:26:53.13:430,53,0	0/0:31,0:27:17.12:0,17,275	0/0:4,0:22:31.27:0,31,163	0/0:4,0:15:34.84:0,35,216	0/0:5,0:9:26.11:0,26,159	0/0:2,0:12:22.86:0,23,121	0/0:2,0:14:14.29:0,14,74	0/0:5,0:22:31.67:0,32,173	0/0:2,0:13:17.04:0,17,86	0/0:2,0:12:22.88:0,23,121	0/0:6,0:32:34.47:0,34,184	0/0:6,0:28:51.36:0,51,271	0/0:18,1:19:20.33:0,20,358	0/0:14,0:16:38.91:0,39,372	0/0:19,0:18:41.89:0,42,393	0/0:2,0:9:15.66:0,16,83	0/0:2,0:13:12.69:0,13,63	0/0:5,0:17:20.22:0,20,134	0/0:9,0:9:21.04:0,21,211	0/0:4,0:17:40.63:0,41,242	0/0:1,0:14:19.89:0,20,100	0/0:1,0:5:5.83:0,6,38
chr10	12018864	.	GAAAAAAAAAAGAAGA	G	1761.76	PASS	AC=10;AF=0.185;AN=54;BaseQRankSum=4.556;DP=433;FS=9.167;HRun=0;HaplotypeScore=156.4015;InbreedingCoeff=0.8988;MQ=52.54;MQ0=16;MQRankSum=-6.483;QD=23.81;ReadPosRankSum=3.019;VQSLOD=2.2454;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:34:81.10:0,81,3268	0/0:11,0:11:27.06:0,27,1067	0/0:28,0:3:5.97:0,6,43	0/0:39,0:9:17.68:0,18,214	0/0:16,0:16:39.09:0,39,1781	1/1:10,7:17:36.11:962,36,0	1/1:14,0:11:12.04:230,12,0	1/1:12,0:12:14.69:144,15,0	0/0:5,0:5:12.03:0,12,597	0/0:14,0:14:24.01:0,24,572	0/0:15,0:15:23.93:0,24,738	0/0:8,0:8:12:0,12,480	0/0:10,0:10:12.88:0,13,443	0/0:13,0:13:14.97:0,15,301	0/0:7,0:7:9:0,9,279	0/0:6,0:6:12.03:0,12,353	0/0:27,0:29:58.44:0,58,2309	0/0:33,0:32:51.03:0,51,1912	1/1:13,0:11:26.74:328,27,0	1/1:17,1:17:23.88:267,24,0	./.	0/0:6,0:6:15:0,15,349	0/0:11,0:11:20.65:0,21,813	0/0:6,0:5:9.01:0,9,274	0/0:18,0:16:36.07:0,36,1362	0/0:15,0:18:48.44:0,48,1968	0/0:20,0:20:23.79:0,24,741	0/0:8,0:9:17.99:0,18,836
chr10	12018878	.	G	GA	2368.88	PASS	AB=0.775;AC=37;AF=0.685;AN=54;BaseQRankSum=-5.065;DP=466;FS=7.532;HRun=14;HaplotypeScore=71.2086;InbreedingCoeff=0.2596;MQ=53.23;MQ0=23;MQRankSum=0.851;QD=7.11;ReadPosRankSum=-1.129;VQSLOD=2.1114;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,1:36:29.73:0,30,323	1/1:1,11:12:22.71:174,23,0	1/1:42,0:5:2.72:14,3,0	0/0:56,0:14:16.25:0,16,86	1/1:14,6:20:24.91:310,25,0	0/0:14,0:14:7.27:0,7,27	0/0:7,0:5:3.71:0,4,9	1/1:6,0:6:0.89:2,1,0	0/1:2,8:10:4.27:90,0,4	0/1:6,11:17:27.89:137,0,28	1/1:5,7:12:2.66:86,3,0	0/1:3,3:6:13.27:20,0,13	1/1:8,2:11:18.01:122,18,0	0/1:11,1:12:19.13:59,0,19	1/1:6,1:7:0.23:52,0,0	1/1:4,6:10:11.97:99,12,0	1/1:26,7:33:1.92:298,2,0	1/1:8,21:28:18.69:226,19,0	0/1:9,0:8:7:7,0,17	0/1:10,0:10:0.80:3,0,1	./.	1/1:3,2:5:6:53,6,0	1/1:10,3:12:7.20:150,7,0	1/1:5,5:9:15:132,15,0	0/0:15,0:15:13.41:0,13,123	0/1:13,12:25:57.07:213,0,57	1/1:3,15:18:12:106,12,0	1/1:5,6:10:3.02:178,3,0
chr10	12018890	.	AAAG	A	356.10	PASS	AB=0.917;AC=7;AF=0.125;AN=56;BaseQRankSum=5.416;DP=531;FS=8.249;HRun=0;HaplotypeScore=95.8624;InbreedingCoeff=-0.1471;MQ=56.89;MQ0=23;MQRankSum=-3.878;QD=1.85;ReadPosRankSum=-0.007;VQSLOD=0.9303;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:92.66:0,93,1280	0/0:14,0:14:37.55:0,38,363	0/1:55,0:8:16.54:17,0,17	0/1:67,0:16:7.45:7,0,125	0/0:25,0:25:50.22:0,50,672	0/1:12,3:15:65.56:255,0,66	0/1:4,3:7:42.86:109,0,43	0/0:22,1:22:45.73:0,46,469	0/0:13,0:13:23.33:0,23,244	0/1:16,0:16:3.58:4,0,312	0/0:10,0:10:17.64:0,18,215	0/0:8,0:8:14.93:0,15,182	0/0:9,0:9:14.37:0,14,170	0/0:15,0:15:2.85:0,3,194	0/0:7,0:7:15.03:0,15,174	0/0:11,0:11:20.76:0,21,203	0/0:32,0:32:31.77:0,32,777	0/0:28,0:27:38.92:0,39,473	0/1:16,0:13:10.03:10,0,224	0/1:13,2:15:74.32:74,0,81	0/0:3,0:3:2.99:0,3,24	0/0:3,0:3:9:0,9,97	0/0:12,0:11:12.52:0,13,205	0/0:8,0:7:17.74:0,18,202	0/0:17,0:16:41.71:0,42,535	0/0:30,0:30:77.08:0,77,859	0/0:21,0:21:27.61:0,28,237	0/0:14,0:12:26.12:0,26,398
chr10	12018900	.	G	GA	2362.16	PASS	AB=0.986;AC=17;AF=0.304;AN=56;BaseQRankSum=-2.115;DP=548;FS=1.488;HRun=8;HaplotypeScore=83.0862;InbreedingCoeff=0.5946;MQ=56.71;MQ0=17;MQRankSum=-3.788;QD=9.23;ReadPosRankSum=-3.982;VQSLOD=1.3583;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:93.02:0,93,845	0/0:16,0:16:42:0,42,375	0/1:45,0:7:0.58:1,0,46	0/1:64,0:17:4.66:5,0,93	0/0:26,0:27:63.94:0,64,553	1/1:5,12:17:39.02:386,39,0	1/1:7,4:11:12.03:135,12,0	1/1:4,30:33:84.17:927,84,0	0/0:14,0:14:26.20:0,26,245	0/1:12,1:13:3.91:4,0,211	0/0:10,0:10:18:0,18,160	0/0:9,0:9:21:0,21,188	0/0:13,0:13:1.99:0,2,141	0/1:14,0:15:19.57:20,0,121	0/0:7,0:7:8.86:0,9,82	0/0:9,0:9:21.01:0,21,190	0/0:30,0:30:74.64:0,75,652	0/0:27,0:27:44.86:0,45,386	1/1:6,16:19:54.63:623,55,0	1/1:6,12:18:35.87:370,36,0	1/1:1,5:6:6.02:69,6,0	0/0:3,0:3:6:0,6,54	0/1:11,0:11:2.99:3,0,102	0/0:8,0:8:18.48:0,18,165	0/0:16,0:16:27:0,27,320	0/0:28,0:28:61.88:0,62,613	0/0:19,0:19:29.14:0,29,261	0/0:22,0:20:52.01:0,52,454
chr10	12018911	.	GA	G	445.66	PASS	AB=0.933;AC=5;AF=0.089;AN=56;BaseQRankSum=3.786;DP=531;FS=12.072;HRun=10;HaplotypeScore=81.3205;InbreedingCoeff=0.7464;MQ=64.23;MQ0=11;MQRankSum=-4.824;QD=9.90;ReadPosRankSum=0.195;VQSLOD=1.2934;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:96.22:0,96,1037	0/0:14,1:15:7.03:0,7,305	0/0:34,0:10:21.04:0,21,219	0/0:51,0:17:7.48:0,7,154	0/0:24,0:24:49:0,49,518	1/1:1,16:17:39.16:337,39,0	1/1:6,8:14:26.97:229,27,0	0/0:32,0:31:87.11:0,87,912	0/0:14,0:14:27.01:0,27,268	0/0:12,0:12:21.05:0,21,226	0/0:9,0:9:15.04:0,15,166	0/0:10,0:10:24.05:0,24,257	0/0:15,0:15:32.90:0,33,336	0/1:13,1:14:1.95:2,0,208	0/0:7,0:7:14.87:0,15,147	0/0:12,0:12:30.03:0,30,311	0/0:27,0:28:68.92:0,69,711	0/0:28,1:29:16.01:0,16,373	0/0:21,0:21:60.11:0,60,633	0/0:15,0:15:33.94:0,34,349	0/0:8,0:8:11.99:0,12,119	0/0:6,0:6:15.03:0,15,159	0/0:9,0:9:12.46:0,12,121	0/0:9,0:9:21.02:0,21,207	0/0:16,0:16:36.04:0,36,370	0/0:30,0:30:61:0,61,646	0/0:19,0:19:24.52:0,25,258	0/0:23,0:22:61.02:0,61,652
chr10	12020176	.	CT	C	2733.38	PASS	AB=0.630;AC=39;AF=0.722;AN=54;BaseQRankSum=3.350;DP=398;FS=2.067;HRun=14;HaplotypeScore=45.5296;InbreedingCoeff=0.4100;MQ=57.28;MQ0=1;MQRankSum=0.538;QD=8.90;ReadPosRankSum=-0.076;VQSLOD=2.3948;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,1:24:29.73:0,30,255	1/1:0,3:3:8.93:62,9,0	./.	0/0:10,1:6:0.47:0,0,1	1/1:6,12:18:29.48:202,29,0	0/0:19,1:23:26.82:0,27,229	0/0:15,0:16:38.83:0,39,335	0/1:17,17:35:3.26:260,0,3	1/1:3,11:14:20.80:144,21,0	1/1:6,16:22:44.37:299,44,0	1/1:6,5:12:18.12:112,18,0	1/1:2,13:16:25.81:170,26,0	0/1:5,7:12:10.05:85,0,10	1/1:4,8:13:10.92:68,11,0	1/1:5,8:13:14.83:103,15,0	1/1:2,9:11:23.80:164,24,0	1/1:3,17:20:9.67:165,10,0	1/1:5,12:17:23.92:165,24,0	1/1:9,13:23:14.85:227,15,0	1/1:1,3:4:5.93:41,6,0	1/1:1,7:8:11.87:82,12,0	1/1:1,6:7:11.86:82,12,0	0/1:2,4:6:12.27:50,0,12	0/1:3,5:8:15.95:50,0,16	0/0:11,1:12:0.47:0,0,135	1/1:12,11:24:8.15:185,8,0	1/1:3,7:10:17.81:123,18,0	0/1:4,2:9:9.82:61,0,10
chr10	12022426	.	G	GA	4375.95	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-14.542;DP=602;FS=3.950;HRun=6;HaplotypeScore=55.2610;InbreedingCoeff=0.9978;MQ=83.23;MQ0=0;MQRankSum=-1.751;QD=32.66;ReadPosRankSum=-2.807;VQSLOD=4.1188;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:54.12:0,54,551	0/0:8,0:8:21.02:0,21,204	0/0:23,0:23:42.07:0,42,421	0/0:12,0:12:23.63:0,24,265	0/0:23,0:23:57.11:0,57,575	1/1:3,22:25:60.19:755,60,0	1/1:3,13:16:36.12:453,36,0	1/1:2,26:28:75.24:942,75,0	0/0:17,0:17:45.10:0,45,459	0/0:33,0:33:90.15:0,90,907	0/0:30,0:30:78.17:0,78,795	0/0:29,0:29:78.18:0,78,796	0/0:28,0:28:81.14:0,81,815	0/0:19,0:19:54.11:0,54,544	0/0:22,0:22:66.12:0,66,664	0/0:15,0:15:39.09:0,39,398	0/0:29,0:29:84.16:0,84,847	0/0:16,0:16:42.07:0,42,420	1/1:1,18:18:54.17:679,54,0	1/1:3,28:31:81.26:1019,81,0	1/1:1,14:15:42.13:528,42,0	0/0:24,0:24:60.13:0,60,611	0/0:29,0:29:81.13:0,81,824	0/0:16,0:16:42.06:0,42,419	0/0:13,0:13:36.08:0,36,367	0/0:20,0:20:57.11:0,57,570	0/0:32,0:32:87.19:0,87,887	0/0:8,0:8:21.05:0,21,214
chr10	12022812	.	G	GT	983.51	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-7.520;DP=566;FS=11.299;HRun=8;HaplotypeScore=52.9936;InbreedingCoeff=0.9513;MQ=73.91;MQ0=0;MQRankSum=-0.028;QD=23.42;ReadPosRankSum=0.371;VQSLOD=3.5285;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:77.50:0,77,689	0/0:9,0:9:21.01:0,21,192	0/0:4,0:5:6.89:0,7,57	0/0:13,0:13:20.90:0,21,226	0/0:29,0:29:75.03:0,75,686	1/1:1,25:26:66.19:759,66,0	1/1:3,13:16:30.09:346,30,0	0/0:45,0:45:99:0,120,1086	0/0:21,0:21:57.02:0,57,522	0/0:14,0:14:39.01:0,39,355	0/0:17,0:17:42.01:0,42,384	0/0:21,0:21:54:0,54,490	0/0:27,0:27:69.01:0,69,627	0/0:23,0:23:57.02:0,57,521	0/0:15,0:15:39.02:0,39,357	0/0:15,0:15:42.02:0,42,384	0/0:24,0:24:66.03:0,66,604	0/0:16,0:16:38.99:0,39,350	0/0:14,0:14:38.98:0,39,350	0/0:20,0:20:57.03:0,57,521	0/0:24,0:24:68.97:0,69,618	0/0:21,0:21:48.01:0,48,439	0/0:12,0:12:36.01:0,36,325	0/0:24,0:24:68.98:0,69,619	0/0:19,0:19:51.01:0,51,467	0/0:26,0:26:60.02:0,60,549	0/0:29,0:28:54.36:0,54,634	0/0:10,0:10:30.02:0,30,275
chr10	12023053	.	CT	C	4957.72	PASS	AB=0.702;AC=40;AF=0.714;AN=56;BaseQRankSum=8.114;DP=506;FS=5.293;HRun=13;HaplotypeScore=57.1461;InbreedingCoeff=0.3050;MQ=72.87;MQ0=1;MQRankSum=-0.830;QD=11.61;ReadPosRankSum=2.601;VQSLOD=4.7058;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,1:27:29.29:0,29,465	1/1:4,5:9:14.90:109,15,0	0/1:11,0:8:0.04:0,0,0	0/0:13,0:9:11.32:0,11,78	1/1:6,25:33:40.40:442,40,0	0/0:23,1:24:35.15:0,35,487	0/0:14,1:15:5.07:0,5,200	1/1:8,19:27:53.54:386,54,0	0/1:5,5:10:11.33:91,0,11	1/1:5,13:18:12.57:255,13,0	1/1:5,13:19:5.57:195,6,0	1/1:2,11:13:29.79:219,30,0	1/1:1,16:17:44.72:328,45,0	1/1:2,11:14:18.44:203,18,0	1/1:3,15:18:38.77:285,39,0	1/1:1,12:13:26.84:197,27,0	0/1:6,7:16:5.18:103,0,5	1/1:4,14:19:8.65:217,9,0	0/1:9,12:22:14.48:224,0,14	0/1:10,14:25:15.27:212,0,15	1/1:1,15:17:37.82:269,38,0	1/1:5,8:13:14.93:127,15,0	1/1:4,14:20:13.64:245,14,0	1/1:5,9:14:0.65:168,1,0	0/1:12,2:14:10.80:11,0,216	0/1:12,12:28:37.76:210,0,38	1/1:5,20:25:29.44:348,29,0	0/1:3,8:12:6.26:114,0,6
chr10	12027343	.	GA	G	10318.86	PASS	AB=1.000;AC=41;AF=0.732;AN=56;BaseQRankSum=12.442;DP=716;FS=2.943;HRun=10;HaplotypeScore=75.6845;InbreedingCoeff=0.8989;MQ=80.04;MQ0=0;MQRankSum=-1.711;QD=19.54;ReadPosRankSum=5.061;VQSLOD=5.5739;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:53:99:0,135,1411	1/1:3,6:9:14.99:130,15,0	0/0:22,0:20:14.69:0,15,150	0/1:17,0:18:7.66:8,0,162	1/1:4,27:32:55.64:631,56,0	1/1:2,18:20:50.99:443,51,0	1/1:3,23:26:59.98:521,60,0	0/0:32,0:32:75.16:0,75,800	1/1:4,34:38:80.97:703,81,0	1/1:8,27:35:80.95:696,81,0	1/1:0,15:15:41.97:360,42,0	1/1:7,21:28:38.06:427,38,0	1/1:2,26:28:68.98:599,69,0	1/1:0,28:28:77.98:677,78,0	1/1:4,25:29:56.98:495,57,0	1/1:5,28:33:77.98:677,78,0	1/1:3,29:34:85.05:715,85,0	1/1:4,22:26:59.98:521,60,0	0/0:14,0:14:33.07:0,33,349	0/0:20,0:20:44.78:0,45,467	0/0:25,1:26:34.09:0,34,595	1/1:0,19:20:55.98:468,56,0	1/1:3,15:18:5.81:279,6,0	1/1:1,24:25:59.99:521,60,0	0/0:21,0:21:63.17:0,63,697	1/1:4,22:26:63.05:565,63,0	1/1:4,22:26:65.97:572,66,0	1/1:0,14:14:35.99:313,36,0
chr10	12027960	.	AC	A	5115.28	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=10.390;DP=607;FS=2.592;HRun=2;HaplotypeScore=59.7287;InbreedingCoeff=0.9933;MQ=85.85;MQ0=0;MQRankSum=-2.233;QD=33.22;ReadPosRankSum=-1.815;VQSLOD=4.1697;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,102,1470	0/0:5,0:5:15.05:0,15,224	0/0:23,0:23:65.67:0,66,920	0/0:20,0:20:59.89:0,60,815	0/0:7,0:7:18.06:0,18,269	1/1:1,12:13:36.12:461,36,0	1/1:0,29:29:78.25:1012,78,0	1/1:1,24:25:72.23:924,72,0	0/0:19,0:19:57.19:0,57,853	0/0:19,0:19:54.15:0,54,774	0/0:10,0:10:30.10:0,30,449	0/0:26,0:26:75.22:0,75,1063	0/0:24,0:24:72.23:0,72,1056	0/0:20,0:20:60.15:0,60,872	0/0:19,0:19:57.19:0,57,848	0/0:17,0:17:51.17:0,51,763	0/0:41,0:41:99:0,120,1700	0/0:46,0:46:99:0,126,1809	1/1:2,18:20:56.96:694,57,0	1/1:1,13:14:30.10:389,30,0	1/1:1,52:53:99:1635,126,0	0/0:14,0:14:39.13:0,39,584	0/0:7,0:7:18.06:0,18,269	0/0:30,0:30:87.28:0,87,1279	0/0:16,0:16:48.12:0,48,675	0/0:26,0:26:78.24:0,78,1145	0/0:17,0:15:51.13:0,51,737	0/0:13,0:13:39.13:0,39,580
chr10	12029228	.	C	CCCA	2824.37	PASS	AB=0.519;AC=11;AF=0.196;AN=56;BaseQRankSum=8.207;DP=655;FS=3.561;HRun=0;HaplotypeScore=96.0294;InbreedingCoeff=0.8780;MQ=70.09;MQ0=3;MQRankSum=-7.090;QD=39.78;ReadPosRankSum=-3.015;VQSLOD=3.4724;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,144,2524	0/0:12,0:12:36.12:0,36,644	0/0:28,0:22:63.19:0,63,1080	0/0:24,0:22:65.92:0,66,1035	0/0:34,0:34:96.29:0,96,1721	1/1:0,10:12:24.08:588,24,0	0/1:1,10:14:27.69:561,0,28	1/1:0,9:9:27.09:595,27,0	0/0:17,0:17:51.17:0,51,933	0/0:34,0:34:99:0,102,1830	0/0:24,0:24:69.24:0,69,1247	0/0:26,0:26:78.25:0,78,1370	0/0:20,0:20:60.21:0,60,1092	0/0:33,0:33:99:0,99,1772	0/0:35,0:35:99:0,105,1891	0/0:28,0:28:84.27:0,84,1501	0/0:35,0:35:99:0,105,1829	0/0:29,0:29:87.23:0,87,1517	1/1:1,6:7:21.02:363,21,0	1/1:1,16:18:27.04:599,27,0	1/1:0,9:10:12.04:294,12,0	0/0:22,0:22:66.23:0,66,1203	0/0:17,0:17:46.96:0,47,799	0/0:33,0:33:96.33:0,96,1749	0/0:21,0:21:63.22:0,63,1152	0/0:24,0:24:69.24:0,69,1257	0/0:24,0:24:69.22:0,69,1226	0/0:15,0:15:45.15:0,45,823
chr10	12029719	.	T	TTTC	5369.90	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=1.664;DP=419;FS=4.358;HRun=0;HaplotypeScore=75.4570;InbreedingCoeff=0.6933;MQ=63.48;MQ0=11;MQRankSum=-2.654;QD=15.30;ReadPosRankSum=-1.086;VQSLOD=4.1721;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:48.05:0,48,628	1/1:7,0:7:2.58:45,3,0	0/0:21,0:11:7.34:0,7,99	0/0:15,0:9:16.03:0,16,164	1/1:16,0:15:14.97:168,15,0	1/1:19,0:20:45.02:530,45,0	1/1:12,0:14:17.98:206,18,0	1/1:30,0:28:50.98:539,51,0	1/1:11,0:10:20.95:203,21,0	1/1:21,0:20:38.11:415,38,0	1/1:15,1:13:17.89:206,18,0	1/1:9,0:8:17.88:217,18,0	1/1:13,0:13:1.67:77,2,0	1/1:16,0:16:9.01:129,9,0	1/1:16,0:16:6.02:94,6,0	1/1:4,3:9:14.89:206,15,0	1/1:14,0:14:11.95:131,12,0	1/1:13,0:13:9.03:140,9,0	1/1:24,0:23:59.87:610,60,0	1/1:12,0:12:15.04:194,15,0	1/1:8,0:8:5.17:109,5,0	1/1:17,0:17:23.94:204,24,0	1/1:12,0:12:17.85:218,18,0	1/1:13,0:13:6.07:135,6,0	0/0:12,0:12:30.08:0,30,382	1/1:18,0:17:36.03:454,36,0	1/1:11,0:11:3:46,3,0	1/1:9,0:9:6.02:94,6,0
chr10	12029731	.	C	CTTCTT	8979.25	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=0.324;DP=518;FS=22.057;HRun=0;HaplotypeScore=111.6221;InbreedingCoeff=0.7689;MQ=46.19;MQ0=28;MQRankSum=-4.335;QD=20.09;ReadPosRankSum=-2.629;VQSLOD=2.6078;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:21:47.44:0,47,832	1/1:4,4:11:4.37:86,4,0	0/0:15,0:4:7.32:0,7,133	0/0:14,0:8:16.15:0,16,204	1/1:11,1:21:34.61:410,35,0	1/1:17,0:22:53.05:882,53,0	1/1:12,0:14:28.17:354,28,0	1/1:31,0:27:58.66:719,59,0	1/1:13,0:11:29.91:379,30,0	1/1:12,0:25:64.44:712,64,0	1/1:12,1:20:36.10:341,36,0	1/1:20,0:16:44.54:497,45,0	1/1:9,0:18:7.17:170,7,0	1/1:9,10:25:20.35:303,20,0	1/1:7,0:18:20.78:207,21,0	1/1:11,0:12:29.83:428,30,0	1/1:3,11:20:14.93:204,15,0	1/1:5,13:16:9.03:222,9,0	1/1:27,0:26:58.74:769,59,0	1/1:14,0:14:15.05:291,15,0	1/1:7,0:7:12.01:192,12,0	1/1:19,0:20:41.69:390,42,0	1/1:7,7:17:20.83:324,21,0	1/1:5,7:14:6.10:211,6,0	0/0:18,0:20:4.14:0,4,476	1/1:8,12:22:43.21:643,43,0	1/1:5,5:12:7.21:105,7,0	1/1:1,1:7:5.81:138,6,0
chr10	12029732	.	T	TTCTTC	6397.69	PASS	AB=0.995;AC=35;AF=0.625;AN=56;BaseQRankSum=-2.980;DP=501;FS=14.800;HRun=0;HaplotypeScore=113.5582;InbreedingCoeff=-0.0510;MQ=45.04;MQ0=29;MQRankSum=-1.424;QD=14.91;ReadPosRankSum=7.315;VQSLOD=2.7261;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:21:48.64:0,49,986	0/1:11,0:11:46.95:47,0,62	0/0:15,0:4:2.92:0,3,120	0/0:14,0:8:17.33:0,17,274	0/1:24,0:22:13.59:168,0,14	1/1:19,3:21:25.98:993,26,0	0/1:14,1:13:57.64:279,0,58	1/1:32,0:28:60.16:1005,60,0	1/1:11,0:9:21.41:220,21,0	0/1:27,0:23:26.16:212,0,26	1/1:21,0:18:11.52:113,12,0	0/1:20,0:16:3.50:122,0,4	0/1:18,0:16:42.88:92,0,43	0/1:20,0:20:17.79:156,0,18	0/1:18,0:18:31.18:54,0,31	1/1:11,0:12:11.14:223,11,0	1/1:19,0:19:5.70:97,6,0	0/1:18,0:15:9.37:145,0,9	1/1:26,0:26:76.29:1117,76,0	1/1:13,0:14:15.02:341,15,0	1/1:8,0:7:12.04:243,12,0	0/1:19,0:19:7.04:38,0,7	0/1:18,0:16:23.29:164,0,23	0/1:13,0:13:12.67:140,0,13	0/0:21,0:21:37.31:0,37,662	1/1:23,0:21:3.69:294,4,0	1/1:12,0:12:1.06:58,1,0	0/1:7,0:7:15.97:78,0,16
chr10	12029733	.	T	TCTTCTTC	5857.52	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=-3.710;DP=508;FS=30.997;HRun=0;HaplotypeScore=132.9627;InbreedingCoeff=-0.2424;MQ=44.38;MQ0=30;MQRankSum=-1.847;QD=14.05;ReadPosRankSum=8.600;VQSLOD=1.9701;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:22:60.46:0,60,1332	0/1:11,0:11:4.89:5,0,67	0/0:15,0:4:11.77:0,12,181	0/0:14,0:8:17.76:0,18,357	0/1:24,0:22:4.75:5,0,95	1/1:22,0:21:7.74:857,8,0	0/1:15,0:13:38.54:226,0,39	1/1:8,19:30:66.84:1569,67,0	1/1:11,0:9:0.74:95,1,0	0/1:27,0:23:13.39:13,0,219	0/1:21,0:18:25.29:25,0,27	0/1:20,0:16:52.22:52,0,73	0/1:17,0:15:39.37:39,0,84	0/1:20,0:20:21.01:38,0,21	0/0:18,0:18:1.50:0,1,52	0/1:12,0:12:34.19:34,0,45	0/1:20,0:20:12.93:21,0,13	0/1:18,0:15:11.81:36,0,12	1/1:4,20:28:84.16:1823,84,0	1/1:5,8:16:14.90:516,15,0	1/1:2,4:7:11.70:325,12,0	0/1:19,0:19:21.24:21,0,114	0/1:18,0:16:24.28:24,0,80	0/1:12,0:12:32.19:32,0,35	0/0:21,0:21:51.78:0,52,958	0/1:21,0:19:61.52:62,0,134	0/1:11,0:11:26.89:29,0,27	0/1:10,0:10:9.12:9,0,28
chr10	12029734	.	T	TTCTTC	1442.11	PASS	AB=0.987;AC=20;AF=0.357;AN=56;BaseQRankSum=4.071;DP=501;FS=18.921;HRun=0;HaplotypeScore=130.2599;InbreedingCoeff=-0.3841;MQ=43.40;MQ0=32;MQRankSum=-5.058;QD=4.46;ReadPosRankSum=7.667;VQSLOD=0.5823;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:22:60.92:0,61,1070	0/1:11,0:11:12.38:12,0,69	0/0:14,0:4:11.07:0,11,174	0/0:13,0:7:14.71:0,15,265	0/1:24,0:22:17.41:17,0,206	0/1:22,0:21:60.21:128,0,60	0/1:15,0:13:49.88:50,0,198	0/1:29,0:24:45.85:374,0,46	0/1:11,0:9:28.57:29,0,84	0/0:27,0:23:48.89:0,49,500	0/0:21,0:18:3.32:0,3,137	0/0:20,0:16:27.30:0,27,258	0/1:17,0:15:35.89:36,0,117	0/1:20,0:20:44.39:44,0,112	0/0:17,0:17:25.33:0,25,168	0/1:12,0:12:45.52:46,0,89	0/1:20,0:20:18.85:19,0,76	0/1:18,0:15:20.87:33,0,21	0/1:25,1:25:99:394,0,187	1/1:13,1:14:14.78:219,15,0	0/1:6,2:7:21.17:125,0,21	0/0:19,0:19:40.15:0,40,359	0/1:17,0:15:21.07:21,0,138	0/1:12,0:12:37.38:37,0,47	0/0:23,0:23:59.50:0,60,822	0/1:21,0:19:3.49:3,0,256	0/1:12,0:11:12.01:12,0,31	0/1:14,0:13:2.78:3,0,50
chr10	12029760	.	T	TC	742.66	PASS	AC=4;AF=0.077;AN=52;BaseQRankSum=-0.603;DP=391;FS=2.945;HRun=1;HaplotypeScore=58.3079;InbreedingCoeff=0.9369;MQ=42.39;MQ0=23;MQRankSum=-4.574;QD=20.63;ReadPosRankSum=0.832;VQSLOD=3.8459;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:21:45.10:0,45,537	0/0:12,0:12:18.05:0,18,220	./.	./.	0/0:17,0:16:27.09:0,27,344	1/1:2,13:14:27.09:379,27,0	1/1:9,12:17:23.48:483,23,0	0/0:18,0:17:50.98:0,51,565	0/0:9,0:8:21:0,21,225	0/0:21,0:16:33.03:0,33,391	0/0:15,0:15:18.04:0,18,205	0/0:13,0:12:30.09:0,30,372	0/0:12,0:11:27.02:0,27,290	0/0:15,0:15:36.09:0,36,435	0/0:14,0:14:36.06:0,36,429	0/0:13,0:13:36.11:0,36,453	0/0:14,0:14:20.97:0,21,220	0/0:14,0:10:20.98:0,21,221	0/0:16,0:16:36.02:0,36,407	0/0:13,0:13:20.97:0,21,220	0/0:9,0:7:11.99:0,12,124	0/0:11,0:11:21.05:0,21,243	0/0:14,0:12:14.99:0,15,151	0/0:13,0:12:11.96:0,12,118	0/0:23,0:23:52.01:0,52,658	0/0:16,0:15:42.08:0,42,500	0/0:11,0:10:21.05:0,21,257	0/0:14,0:13:23.94:0,24,254
chr10	12030677	.	CATT	C	4885.59	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=10.468;DP=618;FS=2.315;HRun=0;HaplotypeScore=92.1455;InbreedingCoeff=0.8940;MQ=71.83;MQ0=0;MQRankSum=-2.983;QD=44.01;ReadPosRankSum=-1.787;VQSLOD=6.0519;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:81.20:0,81,1770	0/0:15,0:15:45.09:0,45,998	0/0:16,0:15:22.05:0,22,836	0/1:8,0:8:2.94:3,0,286	0/0:25,0:25:75.26:0,75,1813	0/0:36,0:36:99:0,99,1068	0/0:16,0:16:48.08:0,48,549	1/1:0,34:34:99:1543,99,0	0/0:26,0:26:75.26:0,75,1813	0/0:31,0:31:93.29:0,93,2064	0/0:28,0:28:81.20:0,81,1708	0/0:15,0:15:42.13:0,42,980	0/0:20,0:20:57.20:0,57,1398	0/0:20,0:20:60.19:0,60,1405	0/0:20,0:20:57.18:0,57,1298	0/0:26,0:26:78.21:0,78,1676	0/0:18,0:18:54.16:0,54,1269	0/0:3,0:3:9.03:0,9,219	1/1:0,25:25:75.13:1148,75,0	1/1:0,33:33:96.32:1750,96,0	1/1:0,11:11:24.08:442,24,0	0/0:23,0:23:69.19:0,69,1542	0/0:19,0:19:57.16:0,57,1232	0/0:17,0:17:51.17:0,51,1212	0/0:15,0:15:45.13:0,45,1053	0/0:27,0:27:81.22:0,81,1782	0/0:38,0:38:99:0,114,2533	0/0:26,0:26:78.24:0,78,1834
chr10	12030678	.	AT	A	1331.33	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=14.531;DP=621;FS=9.082;HRun=10;HaplotypeScore=79.0204;InbreedingCoeff=0.9754;MQ=72.45;MQ0=0;MQRankSum=-0.639;QD=8.70;ReadPosRankSum=-1.284;VQSLOD=1.6138;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:69.17:0,69,754	0/0:15,0:15:39.10:0,39,424	0/0:16,0:15:11.39:0,11,315	0/0:8,0:9:15.23:0,15,121	0/0:26,0:26:75.19:0,75,819	1/1:7,27:34:71.98:625,72,0	1/1:3,13:16:38.98:339,39,0	1/1:34,0:34:52.11:159,52,0	0/0:26,0:26:69.19:0,69,763	0/0:30,1:31:55.15:0,55,823	0/0:27,0:27:37.20:0,37,638	0/0:16,0:16:41.67:0,42,424	0/0:20,0:20:57.15:0,57,624	0/0:20,0:20:54.15:0,54,597	0/0:19,2:21:25.08:0,25,505	0/0:26,0:26:66.14:0,66,706	0/0:17,0:17:51.11:0,51,553	0/0:3,0:3:9:0,9,90	1/1:25,0:25:37.07:128,37,0	1/1:33,0:33:69.29:213,69,0	1/1:11,0:11:17.76:55,18,0	0/0:24,0:24:60.16:0,60,664	0/0:19,0:19:25.69:0,26,467	0/0:16,1:17:25.08:0,25,505	0/0:15,0:15:42.11:0,42,464	0/0:27,0:27:69.17:0,69,750	0/0:37,1:38:76.18:0,76,1043	0/0:27,0:27:72.18:0,72,788
chr10	12033731	.	AGAG	A	5512.60	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=13.351;DP=697;FS=0.873;HRun=0;HaplotypeScore=74.3647;InbreedingCoeff=0.9250;MQ=51.80;MQ0=10;MQRankSum=-2.010;QD=33.21;ReadPosRankSum=-3.025;VQSLOD=4.3811;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:26:48.16:0,48,1163	0/0:10,0:10:30.10:0,30,721	0/0:14,0:2:6.02:0,6,124	0/0:11,0:1:3.01:0,3,56	0/0:33,0:32:78.27:0,78,1903	1/1:1,32:30:57.20:1063,57,0	1/1:1,21:20:30.10:543,30,0	1/1:1,46:26:72.23:1254,72,0	0/0:24,0:24:42.14:0,42,959	0/0:28,0:25:75.26:0,75,1785	0/0:18,0:18:51.18:0,51,1257	0/0:18,0:18:38.97:0,39,941	0/0:33,0:30:69.22:0,69,1625	0/0:29,0:29:63.22:0,63,1523	0/0:27,0:27:45.14:0,45,1060	0/0:23,0:22:48.16:0,48,1140	0/0:40,0:39:75.26:0,75,1846	0/0:30,0:28:66.23:0,66,1625	1/1:0,22:20:57.20:1051,57,0	1/1:0,22:20:51.17:947,51,0	1/1:0,20:19:36.12:655,36,0	0/0:30,0:30:72.25:0,72,1773	0/0:25,0:25:66.23:0,66,1624	0/0:13,0:13:30.10:0,30,739	0/0:33,0:33:84.29:0,84,2071	0/0:22,0:22:66.23:0,66,1572	0/0:38,0:35:69.03:0,69,1680	0/0:5,0:5:5.99:0,6,96
chr10	12033982	.	C	CT	1254.42	PASS	AC=12;AF=0.222;AN=54;BaseQRankSum=1.027;DP=823;FS=1.485;HRun=3;HaplotypeScore=48.0784;InbreedingCoeff=0.7794;MQ=30.45;MQ0=271;MQRankSum=-0.607;QD=7.42;ReadPosRankSum=0.604;VQSLOD=0.6607;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:61,0:45:57.17:0,57,683	0/0:15,0:6:9.03:0,9,108	./.	0/0:29,0:3:9.01:0,9,89	0/0:38,0:21:3.01:0,3,36	1/1:3,17:13:3.01:42,3,0	1/1:2,31:18:27:333,27,0	1/1:12,22:9:15.04:196,15,0	0/0:27,0:21:21.06:0,21,252	0/0:28,0:12:33.10:0,33,395	0/0:15,0:6:12.04:0,12,144	0/0:41,0:31:21.06:0,21,251	0/0:38,0:25:20.90:0,21,251	0/0:36,0:27:17.98:0,18,213	0/0:35,0:29:36.08:0,36,416	0/0:37,0:29:20.83:0,21,251	0/0:19,0:12:3.12:0,3,165	0/0:27,0:19:26.93:0,27,339	1/1:13,10:7:21.05:268,21,0	1/1:4,14:10:18.06:252,18,0	1/1:10,31:20:24.08:336,24,0	0/0:21,0:10:3.01:0,3,36	0/0:18,0:11:3:0,3,36	0/0:39,0:26:45.09:0,45,523	0/0:32,0:22:23.75:0,24,287	0/0:30,0:11:33.10:0,33,396	0/0:40,0:27:12.03:0,12,144	0/0:10,0:4:9.03:0,9,108
chr10	12037179	.	C	CAAA	11512.31	PASS	AB=0.991;AC=42;AF=0.750;AN=56;BaseQRankSum=-3.199;DP=665;FS=0.000;HRun=10;HaplotypeScore=112.5569;InbreedingCoeff=0.7850;MQ=66.00;MQ0=9;MQRankSum=-4.738;QD=22.62;ReadPosRankSum=1.738;VQSLOD=3.1788;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:94.76:0,95,1313	1/1:2,5:7:12.04:231,12,0	0/1:53,0:28:17.33:17,0,168	0/1:45,0:23:32.67:33,0,77	1/1:4,21:28:60.08:1003,60,0	1/1:1,0:20:36.61:259,37,0	1/1:4,0:22:29.88:228,30,0	0/0:26,0:26:30.08:0,30,518	1/1:1,13:15:21.07:404,21,0	1/1:5,12:20:41.46:655,41,0	1/1:2,20:25:57.97:882,58,0	1/1:4,18:24:38.98:665,39,0	1/1:2,4:8:9.01:135,9,0	1/1:6,12:19:21.07:373,21,0	1/1:11,10:23:57.05:893,57,0	1/1:3,14:17:21.04:368,21,0	1/1:5,12:20:27.03:415,27,0	1/1:12,5:19:41.66:548,42,0	0/0:22,0:24:42.96:0,43,473	0/0:24,0:27:42.56:0,43,722	0/0:10,0:12:29.89:0,30,314	1/1:4,16:24:54.04:842,54,0	1/1:6,15:25:54.08:877,54,0	1/1:7,13:24:39.07:591,39,0	0/0:19,0:20:56.99:0,57,653	1/1:4,24:30:75.15:1161,75,0	1/1:11,14:27:48.01:759,48,0	1/1:2,3:5:9.03:173,9,0
chr10	12039275	.	G	GA	112.53	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=3.988;DP=394;FS=2.768;HRun=0;HaplotypeScore=50.1031;InbreedingCoeff=0.7194;MQ=79.53;MQ0=0;MQRankSum=-1.584;QD=3.22;ReadPosRankSum=2.590;VQSLOD=2.6609;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:37.84:0,38,330	0/0:5,0:5:4.65:0,5,64	0/0:14,0:14:19.13:0,19,259	0/0:18,0:17:40.09:0,40,408	0/0:17,0:17:22.11:0,22,261	1/1:0,14:14:2.97:20,3,0	1/1:7,13:21:22.31:199,22,0	0/0:7,0:7:5.56:0,6,100	0/0:11,0:11:32.87:0,33,266	0/0:14,0:14:35.86:0,36,321	0/0:6,0:6:12:0,12,106	0/0:16,0:16:34.38:0,34,336	0/0:12,0:12:29.74:0,30,218	0/0:18,0:18:38.14:0,38,336	0/0:16,0:16:48.03:0,48,454	0/0:24,0:23:62.77:0,63,587	0/0:19,0:19:50.95:0,51,486	0/0:22,0:22:60.05:0,60,628	0/0:11,0:11:29.92:0,30,214	0/0:6,0:6:11.45:0,11,80	0/0:14,0:14:27.17:0,27,191	0/0:6,0:7:12.03:0,12,149	0/0:7,0:7:18.86:0,19,163	0/0:20,0:20:53.91:0,54,532	0/0:14,0:14:22.62:0,23,186	0/0:21,0:21:50.73:0,51,417	0/0:12,0:12:29.99:0,30,267	0/0:3,0:3:9:0,9,91
chr10	12040408	.	T	TA	7881.13	PASS	AB=0.941;AC=37;AF=0.661;AN=56;BaseQRankSum=-11.191;DP=658;FS=0.000;HRun=12;HaplotypeScore=71.1662;InbreedingCoeff=0.8523;MQ=72.18;MQ0=0;MQRankSum=1.792;QD=16.80;ReadPosRankSum=2.477;VQSLOD=5.9446;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:19:43.61:0,44,289	1/1:1,3:4:9.01:88,9,0	0/1:14,1:16:39.98:40,0,68	0/0:9,0:9:6.50:0,6,48	1/1:8,25:34:71.77:647,72,0	0/0:5,0:21:32.58:0,33,94	0/0:4,0:23:34.62:0,35,100	0/0:33,0:33:68.50:0,68,498	1/1:4,16:21:39.98:367,40,0	1/1:9,19:28:38.08:519,38,0	1/1:8,16:25:7.05:369,7,0	1/1:5,25:30:47.20:620,47,0	1/1:3,20:24:41.90:394,42,0	1/1:9,19:28:23.02:387,23,0	1/1:8,24:33:28.29:589,28,0	1/1:5,22:27:57.09:555,57,0	1/1:7,15:23:47.85:441,48,0	1/1:5,16:22:17.03:313,17,0	0/0:15,0:16:31.80:0,32,225	0/0:24,0:24:41.71:0,42,306	0/0:20,0:20:38.73:0,39,284	1/1:5,19:25:53.84:498,54,0	1/1:5,17:23:26.01:401,26,0	1/1:7,19:28:31.85:444,32,0	0/0:24,0:24:50.67:0,51,372	1/1:8,17:25:21.32:337,21,0	1/1:7,33:41:40.10:689,40,0	1/1:2,10:12:2.13:182,2,0
chr10	12042152	.	G	GCT	7551.10	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-16.512;DP=705;FS=1.950;HRun=0;HaplotypeScore=80.1800;InbreedingCoeff=0.9991;MQ=84.97;MQ0=1;MQRankSum=-2.934;QD=42.18;ReadPosRankSum=-2.039;VQSLOD=5.5249;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:66.21:0,66,858	0/0:17,0:17:45.15:0,45,584	0/0:24,0:23:50.74:0,51,618	0/0:32,0:31:58.85:0,59,707	0/0:18,0:18:45.15:0,45,583	1/1:0,22:22:63.22:1072,63,0	1/1:1,24:25:63.22:1072,63,0	1/1:7,31:38:90.29:1498,90,0	0/0:17,0:17:48.14:0,48,610	0/0:25,0:25:69.22:0,69,897	0/0:14,0:14:36.11:0,36,455	0/0:26,0:26:72.22:0,72,920	0/0:33,0:33:93.27:0,93,1175	0/0:32,0:32:87.28:0,87,1130	0/0:33,0:33:87.25:0,87,1102	0/0:26,0:26:63.19:0,63,805	0/0:17,0:17:48.16:0,48,622	0/0:21,0:21:60.19:0,60,778	1/1:3,21:24:63.18:1013,63,0	1/1:8,22:30:63.22:1063,63,0	1/1:0,40:39:99:1833,108,0	0/0:20,0:20:57.18:0,57,731	0/0:21,0:21:54.17:0,54,701	0/0:26,0:26:69.22:0,69,897	0/0:27,0:27:72.23:0,72,936	0/0:36,0:36:99:0,102,1301	0/0:28,0:28:81.26:0,81,1052	0/0:7,0:7:21.07:0,21,273
chr10	12044670	.	G	GACACAC	4348.73	PASS	AB=0.846;AC=42;AF=0.808;AN=52;BaseQRankSum=-4.062;DP=612;FS=1.264;HRun=0;HaplotypeScore=153.4804;InbreedingCoeff=0.5405;MQ=63.15;MQ0=13;MQRankSum=0.794;QD=8.80;ReadPosRankSum=-0.985;VQSLOD=3.8412;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:38:5.18:75,5,0	1/1:11,3:15:0.47:1,0,0	0/1:40,0:19:0:0,0,0	./.	1/1:12,0:12:14.96:184,15,0	1/1:20,0:16:6.01:89,6,0	1/1:28,0:27:10.73:68,11,0	./.	1/1:12,6:21:8.19:257,8,0	1/1:24,0:23:42:779,42,0	0/1:7,3:12:0:1,0,0	1/1:20,0:20:12.88:274,13,0	1/1:16,0:16:6.01:98,6,0	1/1:11,9:23:9.97:291,10,0	1/1:13,8:24:12.04:327,12,0	1/1:6,9:21:20.10:411,20,0	1/1:15,9:34:17.11:332,17,0	1/1:16,0:21:16.68:209,17,0	0/0:9,0:15:6:0,6,65	0/0:9,0:20:12.02:0,12,139	0/0:21,0:36:2.04:0,2,6	0/1:11,8:20:0:0,0,0	1/1:13,4:18:5.69:135,6,0	1/1:14,10:27:6.02:193,6,0	0/1:12,0:17:1:1,0,102	1/1:14,0:13:10.41:132,10,0	1/1:15,0:15:12.04:289,12,0	1/1:5,0:10:12:203,12,0
chr10	12045346	.	A	AGGAGTACGTTTCT	19527.14	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=0.410;DP=797;FS=0.358;HRun=0;HaplotypeScore=270.3032;InbreedingCoeff=0.9998;MQ=70.31;MQ0=0;MQRankSum=-16.065;QD=134.67;ReadPosRankSum=-4.551;VQSLOD=3.2889;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,132,5000	0/0:12,0:12:30.09:0,30,1079	0/0:27,0:27:75.26:0,75,2701	0/0:28,0:28:78.27:0,78,2786	0/0:29,0:29:78.27:0,78,2972	1/1:6,9:17:45.15:2716,45,0	1/1:13,12:32:72.25:4324,72,0	1/1:34,4:39:99:5745,111,0	0/0:38,0:38:99:0,114,4515	0/0:32,0:32:93.30:0,93,3277	0/0:26,0:26:72.23:0,72,2712	0/0:39,0:39:99:0,117,4562	0/0:32,0:32:96.33:0,96,3784	0/0:25,0:25:75.24:0,75,2878	0/0:51,0:51:99:0,147,5635	0/0:33,0:33:99:0,99,3969	0/0:25,0:25:75.26:0,75,3007	0/0:22,0:22:63.22:0,63,2386	1/1:11,6:19:54.12:2622,54,0	1/1:11,6:19:48.16:2700,48,0	1/1:11,3:18:33.11:1420,33,0	0/0:30,0:30:87.27:0,87,3181	0/0:27,0:27:72.25:0,72,2715	0/0:34,0:34:99:0,102,4036	0/0:18,0:18:51.18:0,51,2025	0/0:28,0:28:84.24:0,84,2977	0/0:35,0:35:99:0,105,3922	0/0:15,0:15:45.15:0,45,1685
chr10	12048330	.	T	TGTGTGCTGC	36314.27	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-13.069;DP=771;FS=1.030;HRun=0;HaplotypeScore=183.4012;InbreedingCoeff=0.9879;MQ=61.89;MQ0=0;MQRankSum=-15.522;QD=71.34;ReadPosRankSum=4.195;VQSLOD=4.4075;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,111,2963	1/1:3,11:17:27.04:1275,27,0	0/0:33,0:32:84.10:0,84,1834	0/0:33,0:32:72.53:0,73,1474	1/1:4,21:28:38.86:1679,39,0	1/1:5,26:38:45.15:2125,45,0	1/1:10,12:22:48.09:1906,48,0	0/0:44,0:44:99:0,108,2429	1/1:6,22:29:51.14:2180,51,0	1/1:4,25:34:78.25:3449,78,0	1/1:2,13:17:33.11:1555,33,0	1/1:5,28:38:75.17:3295,75,0	1/1:6,29:38:63.17:2838,63,0	1/1:3,14:20:39.05:1703,39,0	1/1:1,24:31:45.14:2006,45,0	1/1:5,22:30:60.16:2463,60,0	1/1:4,10:15:21.07:992,21,0	1/1:5,9:17:20.96:867,21,0	0/0:17,0:17:48.15:0,48,1274	0/0:26,0:26:72.25:0,72,2076	0/0:46,0:46:99:0,117,2983	1/1:17,14:29:57.14:2042,57,0	1/1:5,15:26:32.56:1295,33,0	1/1:14,5:19:12.04:419,12,0	0/0:19,0:19:51.15:0,51,1352	1/1:3,18:24:57.11:2165,57,0	1/1:14,10:25:50.78:1862,51,0	1/1:8,1:9:11.86:198,12,0
chr10	12050449	.	TTGCGTGTG	T	3756.51	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=7.218;DP=690;FS=19.387;HRun=0;HaplotypeScore=197.5597;InbreedingCoeff=0.9960;MQ=76.97;MQ0=0;MQRankSum=-8.313;QD=41.74;ReadPosRankSum=-1.426;VQSLOD=1.9470;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,105,4321	0/0:9,0:9:27.09:0,27,1098	0/0:29,0:29:63.20:0,63,2087	0/0:26,0:26:62.80:0,63,2203	0/0:38,0:38:81.26:0,81,3262	0/0:22,0:21:57.20:0,57,2372	0/0:29,0:29:72.25:0,72,2992	1/1:14,20:34:60.18:1452,60,0	0/0:23,0:23:57.18:0,57,2256	0/0:33,0:33:87.29:0,87,3504	0/0:15,0:15:36.12:0,36,1495	0/0:26,0:26:63.22:0,63,2682	0/0:28,0:28:72.23:0,72,2895	0/0:25,0:25:63.22:0,63,2673	0/0:29,0:29:57.20:0,57,2386	0/0:21,0:21:57.20:0,57,2420	0/0:29,0:29:78.23:0,78,3162	0/0:25,0:25:60.21:0,60,2456	1/1:10,6:16:21.06:487,21,0	1/1:4,20:24:57.19:1438,57,0	1/1:6,10:16:18.02:380,18,0	0/0:22,0:22:57.14:0,57,2222	0/0:21,0:21:51.18:0,51,2177	0/0:23,0:22:60.21:0,60,2563	0/0:19,0:19:39.13:0,39,1659	0/0:27,0:27:78.27:0,78,3114	0/0:32,0:32:78.25:0,78,3153	0/0:11,0:11:27.09:0,27,1105
chr10	12051860	.	T	TC	23314.99	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-9.125;DP=622;FS=3.749;HRun=0;HaplotypeScore=57.7261;InbreedingCoeff=0.9991;MQ=73.95;MQ0=0;MQRankSum=-4.480;QD=44.16;ReadPosRankSum=2.126;VQSLOD=5.3682;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,123,1718	1/1:0,12:12:33.11:527,33,0	0/0:14,0:14:41.16:0,41,536	0/0:16,0:16:48.15:0,48,642	1/1:0,15:15:39.13:624,39,0	1/1:0,24:24:72.25:1151,72,0	1/1:0,27:27:75.26:1199,75,0	1/1:3,28:31:90.31:1430,90,0	1/1:0,20:20:57.19:911,57,0	1/1:1,18:19:51.17:816,51,0	1/1:0,16:16:39.12:623,39,0	1/1:1,33:34:90.31:1437,90,0	1/1:0,26:26:72.25:1151,72,0	1/1:0,25:25:72.25:1151,72,0	1/1:0,22:22:57.19:911,57,0	1/1:0,27:27:78.27:1247,78,0	1/1:3,38:41:99:1870,117,0	1/1:0,18:18:54.18:863,54,0	1/1:0,21:21:63.21:1008,63,0	1/1:0,12:12:30.10:479,30,0	1/1:1,37:38:99:1631,102,0	1/1:0,8:8:24.08:384,24,0	1/1:0,15:15:42.14:672,42,0	1/1:0,24:24:63.21:1007,63,0	0/0:23,0:23:69.23:0,69,964	1/1:1,23:24:66.22:1052,66,0	1/1:1,13:14:42.14:643,42,0	1/1:1,13:14:33.11:528,33,0
chr10	12052920	.	GCAA	G	17707.82	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=18.137;DP=741;FS=3.425;HRun=0;HaplotypeScore=143.2460;InbreedingCoeff=0.9677;MQ=59.12;MQ0=4;MQRankSum=-3.651;QD=37.60;ReadPosRankSum=7.513;VQSLOD=5.2491;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:62,0:61:99:0,175,3726	1/1:2,6:8:15.01:212,15,0	0/0:21,0:16:39.13:0,39,747	0/0:30,0:25:52.80:0,53,1201	1/1:1,23:24:51.17:819,51,0	1/1:2,11:13:27.09:434,27,0	1/1:5,32:37:90.31:1446,90,0	0/0:32,0:31:81.28:0,81,1725	1/1:2,21:23:63.21:1012,63,0	1/1:1,20:21:60.19:935,60,0	1/1:1,12:13:21.07:338,21,0	1/1:2,37:39:99:1639,102,0	1/1:3,33:36:96.28:1514,96,0	1/1:3,33:36:93.32:1495,93,0	1/1:2,37:39:87.30:1371,87,0	1/1:0,24:24:66.18:1022,66,0	1/1:2,22:24:48.16:771,48,0	1/1:4,26:30:66.22:1052,66,0	0/0:22,0:22:63.17:0,63,1287	0/0:24,0:24:72.25:0,72,1554	0/0:55,0:55:99:0,163,3568	1/1:0,12:12:33.11:515,33,0	1/1:2,15:17:33.07:492,33,0	1/1:0,21:21:44.81:721,45,0	0/0:23,0:23:69.23:0,69,1468	1/1:2,22:22:63.21:1006,63,0	1/1:6,22:28:54.18:865,54,0	1/1:0,2:2:3.01:48,3,0
chr10	12053133	.	TTG	T	3884.01	PASS	AB=1.000;AC=49;AF=0.875;AN=56;BaseQRankSum=3.908;DP=430;FS=20.651;HRun=0;HaplotypeScore=79.4398;InbreedingCoeff=0.4495;MQ=59.92;MQ0=10;MQRankSum=-2.858;QD=10.50;ReadPosRankSum=-3.769;VQSLOD=1.2004;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:87.97:0,88,1125	1/1:7,0:6:15:132,15,0	0/1:33,0:15:11.35:11,0,133	0/1:28,0:14:11.01:11,0,45	1/1:9,0:9:17.24:122,17,0	1/1:13,0:12:27.71:216,28,0	1/1:6,0:6:14.33:110,14,0	0/1:19,0:17:3.97:211,0,4	1/1:10,0:10:23.88:201,24,0	1/1:11,1:12:29.42:217,29,0	1/1:8,0:8:20.07:142,20,0	1/1:11,0:10:28.32:205,28,0	1/1:13,0:13:34.50:241,34,0	1/1:8,1:9:23.63:183,24,0	1/1:14,2:16:33.29:291,33,0	1/1:20,0:20:9.18:54,9,0	1/1:12,0:12:13.60:105,14,0	1/1:17,1:18:23.88:199,24,0	1/1:11,0:8:6.76:119,7,0	1/1:19,0:19:35.72:259,36,0	1/1:9,0:8:9.01:85,9,0	1/1:6,0:6:17.84:136,18,0	1/1:17,1:18:14.60:118,15,0	1/1:23,0:23:0.56:15,1,0	0/0:24,0:23:65.88:0,66,785	1/1:12,0:11:29.78:224,30,0	1/1:12,0:12:29.96:236,30,0	1/1:16,0:16:5.96:43,6,0
chr10	12053134	.	TG	T	4460.01	PASS	AB=0.905;AC=50;AF=0.893;AN=56;BaseQRankSum=4.612;DP=413;FS=39.303;HRun=1;HaplotypeScore=68.1233;InbreedingCoeff=0.5590;MQ=61.21;MQ0=9;MQRankSum=-2.783;QD=12.60;ReadPosRankSum=-2.547;VQSLOD=1.0667;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:72.03:0,72,853	1/1:7,0:6:15:132,15,0	0/1:26,3:14:14.62:15,0,107	0/1:25,3:14:6.73:7,0,43	1/1:1,8:9:17.41:148,17,0	1/1:12,1:12:31.71:261,32,0	1/1:6,0:6:17.92:143,18,0	1/1:17,0:15:6.70:235,7,0	1/1:8,0:8:23.53:188,24,0	1/1:1,11:12:29.94:311,30,0	1/1:0,6:6:17.08:125,17,0	1/1:11,0:10:29.92:261,30,0	1/1:13,0:13:35.16:307,35,0	1/1:8,0:8:23.89:187,24,0	1/1:13,2:15:43.22:339,43,0	1/1:19,1:20:8.45:60,8,0	1/1:11,0:11:29.32:172,29,0	1/1:15,3:18:23.95:256,24,0	1/1:9,0:7:14.44:142,14,0	1/1:3,16:19:35.71:256,36,0	1/1:9,0:8:9:78,9,0	1/1:5,1:6:17.86:137,18,0	1/1:16,1:17:11.33:87,11,0	1/1:23,0:23:8.42:47,8,0	0/0:24,0:23:63.46:0,63,617	1/1:0,12:11:29.87:267,30,0	1/1:12,0:12:34.30:269,34,0	1/1:16,0:16:5.80:32,6,0
chr10	12054462	.	GATAAGAAT	G	23099.04	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=17.618;DP=622;FS=9.739;HRun=0;HaplotypeScore=198.1456;InbreedingCoeff=0.9942;MQ=78.15;MQ0=0;MQRankSum=-17.076;QD=57.89;ReadPosRankSum=6.213;VQSLOD=3.6769;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,120,5166	1/1:1,16:17:39.13:1071,39,0	0/0:29,0:29:84.29:0,84,3158	0/0:13,0:13:39.10:0,39,1478	1/1:3,26:29:51.18:1362,51,0	1/1:3,15:18:39.13:1103,39,0	1/1:5,15:20:33.11:924,33,0	0/0:33,0:33:93.31:0,93,3854	1/1:0,22:22:51.18:1433,51,0	1/1:4,17:21:42.14:1101,42,0	1/1:1,24:25:54.19:1468,54,0	1/1:1,18:19:42.14:1180,42,0	1/1:4,20:24:45.15:1264,45,0	1/1:2,16:18:42.14:1188,42,0	1/1:3,22:25:57.20:1603,57,0	1/1:5,24:29:57.20:1606,57,0	1/1:1,13:14:30.10:848,30,0	1/1:1,5:6:12.04:340,12,0	0/0:24,0:24:72.23:0,72,2973	0/0:28,0:28:81.28:0,81,3530	0/0:16,0:16:48.16:0,48,2106	1/1:3,20:23:42.14:1126,42,0	1/1:3,17:20:42.14:1188,42,0	1/1:3,8:11:24.08:651,24,0	0/0:36,0:36:99:0,99,4234	1/1:4,23:27:69.24:1896,69,0	1/1:5,15:20:33.11:933,33,0	1/1:1,10:11:30.10:813,30,0
chr10	12055477	.	A	AAC	2566.94	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-1.279;DP=693;FS=2.578;HRun=0;HaplotypeScore=82.1620;InbreedingCoeff=0.9989;MQ=74.59;MQ0=0;MQRankSum=-2.129;QD=45.84;ReadPosRankSum=-0.006;VQSLOD=4.9631;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,117,1651	0/0:9,0:9:27.09:0,27,387	0/0:27,0:27:69.21:0,69,964	0/0:23,0:23:55.96:0,56,771	0/0:14,0:14:42.14:0,42,602	1/1:1,27:29:81.28:1479,81,0	1/1:2,25:27:66.23:1210,66,0	0/0:16,0:16:45.15:0,45,645	0/0:19,0:19:54.18:0,54,772	0/0:21,0:21:57.18:0,57,802	0/0:19,0:19:54.18:0,54,774	0/0:27,0:27:81.27:0,81,1161	0/0:25,0:25:72.23:0,72,1015	0/0:31,0:31:87.28:0,87,1226	0/0:30,0:30:84.28:0,84,1204	0/0:28,0:28:78.26:0,78,1118	0/0:33,0:33:81.27:0,81,1160	0/0:23,0:23:66.16:0,66,903	0/0:32,0:32:96.31:0,96,1357	0/0:24,0:24:63.21:0,63,903	0/0:32,0:32:93.29:0,93,1299	0/0:16,0:16:48.15:0,48,671	0/0:23,0:23:60.18:0,60,824	0/0:44,0:44:99:0,123,1727	0/0:18,0:18:51.17:0,51,730	0/0:23,0:23:66.22:0,66,946	0/0:29,0:29:81.25:0,81,1139	0/0:9,0:9:27.09:0,27,387
chr10	12055660	.	G	GGGGAGTATCTTGA	6960.43	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-0.954;DP=611;FS=7.300;HRun=0;HaplotypeScore=215.2032;InbreedingCoeff=0.9986;MQ=84.70;MQ0=0;MQRankSum=-10.600;QD=151.31;ReadPosRankSum=-1.066;VQSLOD=4.3499;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:78.22:0,78,2810	0/0:9,0:9:24.08:0,24,966	0/0:20,0:20:57.20:0,57,1881	0/0:20,0:20:51.17:0,51,1588	0/0:30,0:30:90.28:0,90,3387	1/1:12,12:27:75.21:4215,75,0	1/1:10,7:19:48.16:2745,48,0	0/0:28,0:28:84.28:0,84,2818	0/0:21,0:21:63.22:0,63,2421	0/0:23,0:23:69.21:0,69,2594	0/0:18,0:18:51.17:0,51,1879	0/0:23,0:23:69.21:0,69,2459	0/0:13,0:13:36.12:0,36,1401	0/0:12,0:12:36.11:0,36,1270	0/0:19,0:19:57.20:0,57,2170	0/0:26,0:26:78.26:0,78,2953	0/0:33,0:33:99:0,99,3639	0/0:21,0:21:63.22:0,63,2251	0/0:17,0:17:51.18:0,51,2054	0/0:26,0:26:78.25:0,78,2789	0/0:13,0:13:33.11:0,33,1213	0/0:20,0:20:60.19:0,60,2137	0/0:33,0:33:93.32:0,93,3597	0/0:26,0:26:77.48:0,77,2933	0/0:27,0:27:78.27:0,78,2846	0/0:18,0:18:51.18:0,51,2016	0/0:30,0:30:90.31:0,90,3600	0/0:12,0:12:36.10:0,36,1261
chr10	12056625	.	C	CA	1339.95	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-9.931;DP=643;FS=4.597;HRun=8;HaplotypeScore=62.4764;InbreedingCoeff=0.9948;MQ=74.63;MQ0=0;MQRankSum=-1.051;QD=26.80;ReadPosRankSum=0.247;VQSLOD=4.3747;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,117,1070	0/0:14,0:14:30.01:0,30,274	0/0:16,0:16:41.35:0,41,368	0/0:12,0:12:21.36:0,21,173	0/0:26,0:26:78.04:0,78,713	1/1:3,26:29:75.22:866,75,0	1/1:3,18:21:29.70:596,30,0	0/0:20,0:20:47.99:0,48,432	0/0:16,0:16:45.02:0,45,411	0/0:24,0:24:69.04:0,69,631	0/0:25,0:25:57.02:0,57,522	0/0:18,0:18:51.03:0,51,467	0/0:20,0:20:54.01:0,54,489	0/0:26,0:26:69.03:0,69,631	0/0:24,0:24:69.04:0,69,632	0/0:34,0:34:93.05:0,93,851	0/0:28,0:28:62.38:0,62,562	0/0:27,0:27:75.03:0,75,686	0/0:24,0:24:69.02:0,69,626	0/0:30,0:30:81.04:0,81,740	0/0:23,0:23:60.02:0,60,549	0/0:25,1:26:40.42:0,40,623	0/0:31,0:31:87.02:0,87,791	0/0:10,0:10:27.01:0,27,247	0/0:20,0:20:51.01:0,51,467	0/0:26,0:26:66.02:0,66,600	0/0:22,0:22:56.97:0,57,507	0/0:9,0:9:21.01:0,21,192
chr10	12062769	.	GT	G	4261.86	PASS	AB=0.698;AC=34;AF=0.607;AN=56;BaseQRankSum=-1.970;DP=595;FS=2.767;HRun=14;HaplotypeScore=76.6738;InbreedingCoeff=0.0984;MQ=75.30;MQ0=3;MQRankSum=-0.669;QD=8.97;ReadPosRankSum=5.307;VQSLOD=4.4031;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:33,6:43:24.09:24,0,562	1/1:1,10:11:23.76:164,24,0	0/1:22,2:20:18.03:18,0,98	0/1:19,0:13:3.89:4,0,17	1/1:15,17:36:3.60:290,4,0	1/1:7,18:25:0.84:264,1,0	1/1:7,16:23:53.39:365,53,0	0/0:12,0:36:70.02:0,70,405	0/1:5,7:12:25.39:81,0,25	1/1:6,12:18:7.79:198,8,0	0/1:5,7:13:23.91:138,0,24	1/1:8,14:22:17.19:261,17,0	1/1:8,12:20:10.72:217,11,0	0/1:4,7:12:21.25:103,0,21	0/1:15,16:32:29:258,0,29	0/1:8,16:24:11.04:205,0,11	1/1:6,16:23:18.78:266,19,0	1/1:3,14:18:18.77:261,19,0	0/0:11,0:23:33.28:0,33,217	0/0:8,0:19:38.27:0,38,208	0/0:6,0:19:22.75:0,23,118	0/1:9,13:23:7.32:225,0,7	0/1:3,8:11:4.05:120,0,4	1/1:3,14:17:35.68:245,36,0	0/0:22,0:22:51.15:0,51,446	0/1:7,6:14:29.90:103,0,30	1/1:2,17:20:46.66:314,47,0	0/1:5,8:14:46.68:139,0,47
chr10	12064017	.	CT	C	1397.35	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.895;DP=718;FS=3.734;HRun=2;HaplotypeScore=120.6384;InbreedingCoeff=0.9703;MQ=85.62;MQ0=0;MQRankSum=-0.679;QD=31.76;ReadPosRankSum=1.405;VQSLOD=3.3359;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,144,2091	0/0:9,0:9:27.09:0,27,405	0/0:27,0:27:68.20:0,68,987	0/0:27,0:27:48.82:0,49,996	0/0:20,0:20:57.19:0,57,852	1/1:0,23:23:57.19:740,57,0	1/1:0,21:21:60.20:779,60,0	0/0:24,0:24:69.21:0,69,980	0/0:25,0:25:75.24:0,75,1101	0/0:25,0:25:75.24:0,75,1090	0/0:19,0:19:57.19:0,57,852	0/0:26,0:26:78.26:0,78,1149	0/0:31,0:31:93.28:0,93,1335	0/0:21,0:21:63.19:0,63,901	0/0:26,0:26:75.25:0,75,1119	0/0:34,0:34:99:0,102,1490	0/0:24,0:24:72.22:0,72,1040	0/0:28,0:28:81.12:0,81,1094	0/0:27,0:27:78.23:0,78,1111	0/0:18,0:18:54.16:0,54,769	0/0:54,0:54:99:0,156,2235	0/0:23,0:23:66.21:0,66,954	0/0:22,0:22:66.20:0,66,951	0/0:24,0:24:72.23:0,72,1055	0/0:28,0:28:84.28:0,84,1255	0/0:27,0:27:81.27:0,81,1214	0/0:33,0:33:96.26:0,96,1394	0/0:3,0:3:9.03:0,9,135
chr10	12064979	.	CCAAGGCCACGCCTCCTCTAA	C	3459.50	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.729;DP=767;FS=0.835;HRun=0;HaplotypeScore=379.2954;InbreedingCoeff=0.9686;MQ=63.57;MQ0=0;MQRankSum=-7.637;QD=80.45;ReadPosRankSum=2.156;VQSLOD=2.1937;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,120,9313	0/0:17,0:17:51.13:0,51,3371	0/0:19,0:19:32.97:0,33,1479	0/0:32,0:29:69.68:0,70,4322	0/0:32,0:32:84.26:0,84,6485	1/1:1,24:25:42.14:2306,42,0	1/1:1,17:18:21.07:1153,21,0	0/0:30,0:30:68.97:0,69,4459	0/0:28,0:28:84.29:0,84,7497	0/0:35,0:35:96.22:0,96,6607	0/0:30,0:30:78.17:0,78,5979	0/0:49,0:49:99:0,141,12143	0/0:18,0:18:54.14:0,54,4644	0/0:17,0:17:45.15:0,45,3948	0/0:19,0:19:51.01:0,51,4527	0/0:26,0:26:69.24:0,69,5734	0/0:40,0:40:99:0,114,9537	0/0:28,0:28:78.27:0,78,6684	0/0:20,0:20:54.10:0,54,2739	0/0:28,0:28:81.23:0,81,6463	0/0:28,0:28:84.20:0,84,6783	0/0:32,0:32:87.22:0,87,6622	0/0:20,0:20:54.19:0,54,4648	0/0:37,0:37:99:0,102,8634	0/0:30,0:30:84.27:0,84,7201	0/0:28,0:28:81.15:0,81,6019	0/0:29,0:29:75.20:0,75,6453	0/0:7,0:7:9.03:0,9,855
chr10	12067192	.	AC	A	12421.47	PASS	AB=0.537;AC=35;AF=0.673;AN=52;BaseQRankSum=14.645;DP=619;FS=7.599;HRun=3;HaplotypeScore=59.9655;InbreedingCoeff=0.9220;MQ=54.31;MQ0=46;MQRankSum=2.941;QD=31.45;ReadPosRankSum=3.929;VQSLOD=4.6429;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:96.31:0,96,1365	1/1:0,7:7:18.06:219,18,0	./.	./.	1/1:5,23:26:69.17:829,69,0	0/0:19,0:19:48.14:0,48,672	0/0:26,0:21:54.15:0,54,740	0/0:26,0:22:66.14:0,66,895	1/1:1,16:16:42.13:520,42,0	1/1:2,27:28:75.71:930,76,0	1/1:2,12:13:36.03:411,36,0	1/1:0,32:32:81.25:1003,81,0	1/1:1,14:15:42.13:520,42,0	1/1:1,23:23:63.20:779,63,0	1/1:3,19:21:51.16:632,51,0	1/1:0,22:22:66.21:818,66,0	0/1:4,25:27:8.36:746,0,8	1/1:1,24:25:66.21:818,66,0	0/0:22,0:16:48.15:0,48,672	0/0:20,0:19:57.19:0,57,820	0/0:26,0:24:69.69:0,70,974	1/1:2,21:22:57.18:706,57,0	1/1:1,18:19:51.16:632,51,0	1/1:2,23:25:66.20:812,66,0	0/0:15,0:15:45.15:0,45,648	1/1:1,24:24:72.23:892,72,0	1/1:1,24:25:60.19:744,60,0	1/1:0,14:14:33.10:409,33,0
chr10	12070877	.	GC	G	10460.07	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=11.830;DP=646;FS=6.437;HRun=6;HaplotypeScore=152.1495;InbreedingCoeff=0.9993;MQ=71.79;MQ0=1;MQRankSum=-16.784;QD=27.45;ReadPosRankSum=3.130;VQSLOD=2.9811;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,153,1947	1/1:2,10:12:27.07:290,27,0	0/0:18,0:18:29.70:0,30,502	0/0:21,0:21:44.58:0,45,508	1/1:4,9:12:24.06:258,24,0	0/0:24,0:24:62.90:0,63,828	0/0:27,0:27:78.21:0,78,978	0/0:29,0:29:69.21:0,69,881	1/1:1,16:17:51.13:548,51,0	1/1:5,24:29:81.20:863,81,0	1/1:5,7:12:30.06:313,30,0	1/1:5,21:26:66.14:699,66,0	1/1:2,16:18:48.12:515,48,0	1/1:3,20:23:66.12:690,66,0	1/1:3,25:28:72.18:773,72,0	1/1:4,26:30:84.17:878,84,0	1/1:5,22:27:60.14:644,60,0	1/1:1,19:20:48.12:516,48,0	0/0:20,0:20:57.17:0,57,735	0/0:22,0:22:63.18:0,63,811	0/0:35,0:34:81.26:0,81,1066	1/1:5,22:27:75.17:797,75,0	1/1:2,13:15:36.07:378,36,0	1/1:3,15:18:30.06:314,30,0	0/0:15,0:15:45.12:0,45,563	1/1:4,20:24:63.14:669,63,0	1/1:2,24:26:78.19:834,78,0	1/1:5,11:16:45.11:483,45,0
chr10	12071068	.	G	GTCTC	2098.44	PASS	AB=1.000;AC=41;AF=0.854;AN=48;BaseQRankSum=1.392;DP=664;FS=0.000;HRun=0;HaplotypeScore=126.1588;InbreedingCoeff=0.3521;MQ=64.29;MQ0=37;MQRankSum=-1.543;QD=4.48;ReadPosRankSum=-1.051;VQSLOD=2.2495;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:31,0:30:14.87:142,15,0	1/1:13,0:13:10.20:72,10,0	./.	./.	1/1:21,0:19:2.73:25,3,0	1/1:22,0:22:6.63:60,7,0	1/1:19,0:19:5.45:33,5,0	1/1:23,0:23:1.72:4,2,0	1/1:23,0:21:3.01:42,3,0	1/1:23,0:22:17.24:145,17,0	./.	1/1:21,0:21:11.89:120,12,0	1/1:19,0:19:18.02:240,18,0	1/1:18,6:25:5.95:88,6,0	1/1:23,0:23:9:77,9,0	1/1:30,0:30:27.69:223,28,0	1/1:31,0:29:27.42:241,27,0	1/1:17,0:16:12.88:153,13,0	0/0:18,0:18:1.37:0,1,7	0/0:20,0:20:3:0,3,26	0/0:17,0:16:2.94:0,3,18	1/1:20,0:20:9.01:97,9,0	./.	0/1:24,0:21:8.96:109,0,9	1/1:17,0:17:3:25,3,0	1/1:30,0:30:22.76:190,23,0	1/1:27,0:27:12.52:84,13,0	1/1:7,0:6:5.96:43,6,0
chr10	12077569	.	G	GAA	1079.03	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-2.869;DP=686;FS=6.320;HRun=10;HaplotypeScore=80.3721;InbreedingCoeff=0.9831;MQ=70.02;MQ0=0;MQRankSum=-0.705;QD=23.46;ReadPosRankSum=0.345;VQSLOD=3.1629;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:28:59.81:0,60,654	0/0:13,0:13:30.03:0,30,305	0/0:12,0:12:11.86:0,12,122	0/0:13,0:12:29.99:0,30,285	0/0:32,0:33:83.88:0,84,828	1/1:7,13:21:36.12:521,36,0	1/1:4,19:25:50.14:680,50,0	0/0:25,0:26:59.84:0,60,591	0/0:30,0:30:75.11:0,75,753	0/0:41,0:41:93.12:0,93,941	0/0:23,0:23:57.12:0,57,580	0/0:24,0:26:62.85:0,63,686	0/0:30,0:31:65.81:0,66,724	0/0:22,0:22:63.14:0,63,641	0/0:33,0:34:83.85:0,84,907	0/0:31,0:31:69.07:0,69,702	0/0:15,0:16:41.79:0,42,399	0/0:15,0:15:39.08:0,39,397	0/0:16,0:16:36.06:0,36,366	0/0:25,0:26:65.85:0,66,707	0/0:18,0:19:53.84:0,54,523	0/0:25,0:26:56.84:0,57,632	0/0:25,0:25:54.08:0,54,542	0/0:23,0:23:60.13:0,60,610	0/0:24,0:26:49.24:0,49,550	0/0:28,0:29:71.89:0,72,781	0/0:36,0:36:99:0,102,1037	0/0:19,0:20:47.82:0,48,540
chr10	12079725	.	CTT	C	3494.45	PASS	AB=0.615;AC=41;AF=0.732;AN=56;BaseQRankSum=1.896;DP=522;FS=0.000;HRun=16;HaplotypeScore=81.6789;InbreedingCoeff=0.7989;MQ=59.75;MQ0=14;MQRankSum=5.195;QD=9.27;ReadPosRankSum=7.954;VQSLOD=1.3354;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:49.24:0,49,511	1/1:1,0:6:8.21:35,8,0	1/1:14,1:7:0.41:40,0,0	0/0:6,0:8:1.36:0,1,3	1/1:16,17:38:26.22:243,26,0	1/1:8,11:20:18.87:159,19,0	1/1:4,13:19:47.13:361,47,0	0/0:15,0:25:45.84:0,46,409	1/1:5,12:18:20.70:217,21,0	1/1:6,11:22:17.14:221,17,0	1/1:9,8:18:15.47:134,15,0	1/1:2,8:10:11.84:100,12,0	1/1:9,6:15:17.43:137,17,0	1/1:4,4:12:16.90:97,17,0	1/1:11,11:24:25.72:185,26,0	1/1:6,12:21:26.10:183,26,0	1/1:2,14:17:14.83:242,15,0	1/1:5,5:10:11.60:87,12,0	0/0:13,0:16:26.85:0,27,259	0/0:11,0:31:55.21:0,55,474	0/0:3,1:4:8.88:0,9,58	1/1:5,11:16:26.83:225,27,0	1/1:5,12:19:32.25:249,32,0	0/1:6,10:16:5.76:130,0,6	0/0:23,0:24:39.44:0,39,380	1/1:7,7:15:20.29:147,20,0	1/1:10,6:21:17.13:152,17,0	1/1:5,10:16:12.51:150,13,0
chr10	12081780	.	CT	C	4631.40	PASS	AB=0.545;AC=39;AF=0.696;AN=56;BaseQRankSum=-2.600;DP=390;FS=0.000;HRun=12;HaplotypeScore=43.9457;InbreedingCoeff=0.8312;MQ=62.02;MQ0=4;MQRankSum=1.778;QD=17.35;ReadPosRankSum=4.746;VQSLOD=5.3438;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:21:44.83:0,45,413	1/1:1,6:7:11.93:93,12,0	0/0:7,0:6:3:0,3,28	0/0:7,0:6:9.02:0,9,90	1/1:6,14:20:46.84:354,47,0	1/1:4,14:18:35.85:279,36,0	1/1:2,7:9:20.91:163,21,0	0/0:18,0:36:62.28:0,62,395	1/1:2,11:12:23.90:186,24,0	1/1:3,16:19:44.78:348,45,0	1/1:4,11:17:36.92:267,37,0	1/1:0,13:13:38.85:302,39,0	1/1:0,9:9:26.90:209,27,0	1/1:1,17:19:46.85:354,47,0	1/1:2,12:14:23.89:186,24,0	1/1:1,14:14:35.84:279,36,0	1/1:2,13:15:29.88:232,30,0	1/1:3,5:8:11.93:93,12,0	0/0:9,0:19:28.98:0,29,177	0/0:3,0:8:17.64:0,18,91	0/0:4,0:13:22.88:0,23,130	1/1:1,7:8:18.77:137,19,0	1/1:0,16:16:47.82:371,48,0	1/1:0,5:5:14.94:116,15,0	0/0:10,1:11:3.82:0,4,220	1/1:2,13:15:11.38:271,11,0	1/1:5,15:20:38.77:295,39,0	0/1:1,5:6:12.48:98,0,12
chr10	12082190	.	TA	T	259.30	PASS	AC=10;AF=0.833;AN=12;BaseQRankSum=-1.240;DP=361;FS=0.000;HRun=4;HaplotypeScore=12.0120;MQ=8.40;MQ0=288;MQRankSum=0.718;QD=8.10;ReadPosRankSum=0.718;VQSLOD=-0.1161;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	1/1:0,4:2:6.02:71,6,0	./.	./.	./.	./.	./.	./.	./.	./.	1/1:2,3:1:2.97:20,3,0	./.	./.	./.	./.	./.	./.	./.	./.	1/1:4,5:5:12.03:141,12,0	./.	1/1:4,3:1:3.01:35,3,0	1/1:4,3:3:8.94:75,9,0	./.	0/0:18,0:10:11.90:0,12,114	./.	./.	./.
chr10	12088125	.	TA	T	6512.81	PASS	AB=0.821;AC=49;AF=0.875;AN=56;BaseQRankSum=1.730;DP=406;FS=13.536;HRun=11;HaplotypeScore=50.3667;InbreedingCoeff=0.4768;MQ=75.40;MQ0=0;MQRankSum=-2.883;QD=17.32;ReadPosRankSum=2.267;VQSLOD=4.6324;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:18:44.92:0,45,452	0/1:3,6:9:11.01:127,0,11	0/1:14,1:15:18.64:19,0,85	0/1:10,1:6:23.25:28,0,23	1/1:6,22:29:6.88:451,7,0	1/1:1,11:12:35.94:292,36,0	1/1:3,7:10:23.95:193,24,0	1/1:6,18:24:26.97:417,27,0	1/1:2,8:10:20.96:172,21,0	1/1:0,14:14:41.95:345,42,0	1/1:3,25:28:62.90:517,63,0	1/1:2,7:9:17.97:148,18,0	1/1:2,4:6:8.99:74,9,0	1/1:2,11:13:29.96:246,30,0	1/1:3,4:7:11.97:99,12,0	1/1:1,10:11:29.96:246,30,0	1/1:1,22:23:62.93:517,63,0	1/1:3,18:21:41.85:337,42,0	1/1:6,14:20:44.93:368,45,0	1/1:1,14:15:38.94:320,39,0	1/1:2,4:6:11.98:99,12,0	1/1:3,9:12:25.22:219,25,0	1/1:2,9:11:26.96:222,27,0	1/1:1,8:9:23.97:197,24,0	0/0:11,0:12:29.91:0,30,302	1/1:4,11:15:29.94:246,30,0	1/1:3,14:17:29.74:246,30,0	1/1:1,16:17:44.94:369,45,0
chr10	12088145	.	A	AT	455.36	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=-1.656;DP=402;FS=3.834;HRun=11;HaplotypeScore=67.8855;InbreedingCoeff=0.6335;MQ=65.64;MQ0=1;MQRankSum=-3.544;QD=11.98;ReadPosRankSum=-0.574;VQSLOD=3.3230;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:23:52.82:0,53,400	0/0:7,0:7:17.93:0,18,139	0/0:6,0:5:2.63:0,3,22	0/0:12,0:5:14.76:0,15,98	0/0:26,0:27:55.78:0,56,420	1/1:4,12:16:15.84:342,16,0	1/1:2,7:10:23.88:226,24,0	0/0:25,0:25:50.71:0,51,387	0/0:9,0:9:11.93:0,12,91	0/0:15,1:18:15.37:0,15,273	0/0:25,1:26:64.97:0,65,509	0/0:5,0:5:11.95:0,12,93	0/0:7,0:7:17.93:0,18,139	0/0:11,0:12:26.70:0,27,199	0/0:5,0:5:14.94:0,15,116	0/0:9,0:9:20.91:0,21,162	0/0:25,0:25:65.73:0,66,508	0/0:21,0:20:41.83:0,42,325	0/0:22,1:23:33.93:0,34,314	0/0:16,0:16:32.82:0,33,253	0/0:4,0:4:11.95:0,12,93	0/0:14,0:14:35.85:0,36,276	0/0:10,0:11:19.95:0,20,145	0/0:11,1:12:18.33:0,18,193	0/1:12,0:12:12.16:12,0,156	0/0:15,1:16:4.46:0,4,207	0/0:12,0:13:34.88:0,35,256	0/0:16,0:16:29.78:0,30,224
chr10	12093649	.	AG	A	1894.40	PASS	AB=0.697;AC=4;AF=0.071;AN=56;BaseQRankSum=4.946;DP=685;FS=9.829;HRun=1;HaplotypeScore=78.8792;InbreedingCoeff=-0.0771;MQ=66.68;MQ0=1;MQRankSum=-2.897;QD=11.69;ReadPosRankSum=-0.879;VQSLOD=0.8014;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:99:0,99,1514	0/0:20,0:20:60.19:0,60,896	0/0:18,0:13:29.21:0,29,421	0/0:18,0:12:27.58:0,28,332	0/0:33,0:33:96.22:0,96,1414	0/0:38,0:38:99:0,108,1587	0/0:31,0:31:93.30:0,93,1400	0/1:31,11:41:99:336,0,1199	0/0:20,0:20:60.14:0,60,890	0/0:20,0:20:57.19:0,57,856	0/0:28,0:28:84.27:0,84,1264	0/0:21,0:21:63.19:0,63,921	0/0:10,0:10:30.08:0,30,431	0/0:13,0:13:39.12:0,39,575	0/0:13,0:13:39.13:0,39,597	0/0:13,0:13:39.13:0,39,597	0/0:25,0:25:75.22:0,75,1100	0/0:9,0:9:27.07:0,27,390	0/1:26,21:44:99:587,0,968	0/1:34,20:54:99:590,0,1337	0/1:5,14:19:99:491,0,153	0/0:21,0:21:60.17:0,60,874	0/0:30,0:30:90.27:0,90,1330	0/0:18,0:18:54.17:0,54,801	0/0:28,0:28:81.27:0,81,1238	0/0:24,0:24:72.23:0,72,1067	0/0:26,0:26:75.21:0,75,1083	0/0:13,0:13:39.13:0,39,597
chr10	12094027	.	GCACA	G	14653.33	PASS	AB=1.000;AC=41;AF=0.788;AN=52;BaseQRankSum=14.050;DP=722;FS=17.513;HRun=0;HaplotypeScore=100.9319;InbreedingCoeff=0.3986;MQ=43.76;MQ0=80;MQRankSum=0.825;QD=26.17;ReadPosRankSum=2.803;VQSLOD=3.6608;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:48:60.21:0,60,1590	1/1:0,3:3:3.01:56,3,0	./.	./.	1/1:2,30:30:66.03:1158,66,0	0/1:31,0:28:99:337,0,825	0/1:27,0:24:16.80:17,0,919	0/0:32,0:13:30.10:0,30,798	1/1:4,34:36:57.20:1064,57,0	1/1:5,24:22:54.18:980,54,0	1/1:0,21:20:51.17:952,51,0	1/1:3,16:17:39.13:728,39,0	1/1:3,26:24:45:839,45,0	1/1:0,18:16:36.12:672,36,0	1/1:0,13:10:21.07:374,21,0	1/1:2,16:15:24.08:448,24,0	1/1:4,27:31:45.15:840,45,0	1/1:1,10:9:18.06:336,18,0	0/1:31,0:23:99:213,0,1283	0/1:40,0:38:99:481,0,1159	0/1:41,0:39:99:216,0,1215	1/1:1,22:22:44.67:839,45,0	1/1:0,25:24:51.17:951,51,0	1/1:1,17:17:24.08:448,24,0	0/0:27,0:27:51.18:0,51,1354	1/1:0,27:21:63.22:1175,63,0	1/1:1,24:25:60.16:1084,60,0	1/1:0,10:10:24.08:448,24,0
chr10	12094030	.	CACA	C	4525.68	PASS	AB=0.814;AC=40;AF=0.769;AN=52;BaseQRankSum=15.926;DP=712;FS=17.857;HRun=0;HaplotypeScore=128.9126;InbreedingCoeff=0.4614;MQ=43.52;MQ0=80;MQRankSum=1.160;QD=8.62;ReadPosRankSum=5.277;VQSLOD=3.1136;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:48:63.20:0,63,1502	1/1:3,0:3:2.92:17,3,0	./.	./.	1/1:32,0:30:11.77:285,12,0	0/1:24,9:29:99:188,0,759	0/0:26,1:24:5.09:0,5,851	0/0:25,4:12:35.99:0,36,775	1/1:37,0:35:33.75:299,34,0	1/1:26,0:20:21.65:256,22,0	1/1:21,0:20:49.72:290,50,0	1/1:18,0:16:38.02:222,38,0	1/1:29,0:23:43.87:256,44,0	1/1:18,0:16:35.09:205,35,0	1/1:13,0:10:19.10:107,19,0	1/1:17,0:14:23.40:137,23,0	1/1:30,0:30:0.23:206,0,0	1/1:11,0:9:17.55:102,18,0	0/1:24,6:23:99:117,0,1231	0/1:25,13:36:99:271,0,1073	0/1:37,5:40:99:109,0,1140	1/1:22,0:21:43.80:256,44,0	1/1:25,0:24:49.72:289,50,0	1/1:18,0:17:23.40:136,23,0	0/0:29,0:28:51.18:0,51,1254	1/1:27,0:21:61.41:357,61,0	1/1:25,0:25:21.28:285,21,0	1/1:10,0:10:23.40:136,23,0
chr10	12095129	.	G	GA	3629.52	PASS	AB=0.721;AC=20;AF=0.625;AN=32;BaseQRankSum=-4.656;DP=456;FS=4.440;HRun=1;HaplotypeScore=47.1260;InbreedingCoeff=0.2380;MQ=53.09;MQ0=111;MQRankSum=-2.706;QD=12.26;ReadPosRankSum=-0.135;VQSLOD=1.8952;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:45:96.31:0,96,1244	./.	0/0:25,0:10:24.07:0,24,301	0/0:21,0:12:28.72:0,29,261	1/1:0,4:3:2.97:20,3,0	1/1:3,48:32:66.15:939,66,0	1/1:0,42:27:63.17:916,63,0	0/1:22,16:28:99:352,0,568	./.	1/1:0,3:1:3.01:45,3,0	./.	./.	1/1:1,4:1:2.98:22,3,0	./.	1/1:0,6:1:2.97:20,3,0	./.	./.	./.	0/1:23,11:25:99:163,0,593	0/1:28,24:44:99:565,0,618	0/1:30,16:45:99:523,0,924	./.	1/1:1,3:2:2.97:20,3,0	./.	0/0:21,0:20:51.17:0,51,662	./.	1/1:0,11:1:3.01:45,3,0	./.
chr10	12095451	.	A	AC	2929.40	PASS	AC=32;AF=0.727;AN=44;BaseQRankSum=9.709;DP=423;FS=6.973;HRun=0;HaplotypeScore=60.9558;InbreedingCoeff=0.7810;MQ=28.10;MQ0=135;MQRankSum=-1.786;QD=16.18;ReadPosRankSum=2.858;VQSLOD=5.3619;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:27:48.16:0,48,671	./.	./.	./.	./.	0/0:22,0:9:6.02:0,6,84	0/0:20,0:7:12.04:0,12,160	./.	1/1:0,10:9:18.06:238,18,0	1/1:0,8:6:18.06:235,18,0	1/1:0,4:2:3.01:40,3,0	1/1:0,9:6:8.90:119,9,0	1/1:1,12:11:20.62:275,21,0	1/1:0,14:13:24.08:312,24,0	1/1:4,14:17:10.74:222,11,0	1/1:2,11:11:12.14:189,12,0	1/1:2,10:8:4.91:78,5,0	1/1:1,9:8:6.02:79,6,0	0/0:15,0:8:18.06:0,18,252	0/0:32,0:20:42.10:0,42,564	./.	1/1:3,11:8:9.03:121,9,0	1/1:0,11:7:6:82,6,0	1/1:0,9:8:18.06:234,18,0	0/0:30,0:23:24.08:0,24,331	1/1:0,9:6:18.06:238,18,0	1/1:0,22:20:44.63:594,45,0	1/1:1,4:2:2.54:39,3,0
chr10	12095553	.	A	AT	64.74	PASS	AB=1.000;AC=9;AF=0.321;AN=28;BaseQRankSum=2.916;DP=208;FS=0.000;HRun=0;HaplotypeScore=45.1344;InbreedingCoeff=0.5779;MQ=27.83;MQ0=75;MQRankSum=-0.983;QD=3.41;ReadPosRankSum=-1.052;VQSLOD=2.2943;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:28:42.12:0,42,579	./.	./.	./.	0/1:3,0:1:0:0,0,0	0/0:7,0:5:9.03:0,9,116	0/0:20,0:12:20.81:0,21,230	0/0:9,0:3:9.03:0,9,118	./.	0/0:1,0:1:3.01:0,3,42	./.	./.	1/1:3,1:1:3.01:38,3,0	1/1:4,0:1:3:26,3,0	./.	./.	./.	1/1:4,1:1:3.01:41,3,0	0/0:5,0:4:12.04:0,12,166	0/0:17,0:11:4.83:0,5,47	0/0:20,0:6:9.03:0,9,126	./.	./.	./.	0/0:14,0:12:15.04:0,15,208	1/1:1,2:2:6.01:64,6,0	./.	./.
chr10	12095590	.	CTCACAT	C	385.14	PASS	AB=1.000;AC=20;AF=0.556;AN=36;BaseQRankSum=5.510;DP=273;FS=11.461;HRun=0;HaplotypeScore=56.1343;InbreedingCoeff=0.5423;MQ=38.46;MQ0=45;MQRankSum=-4.176;QD=5.35;ReadPosRankSum=0.511;VQSLOD=0.2006;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:72.25:0,72,2223	./.	0/0:56,0:14:26.39:0,26,781	0/0:55,0:9:26.30:0,26,636	1/1:7,0:3:0.47:1,0,0	1/1:3,1:3:5.93:52,6,0	1/1:7,6:9:12.70:245,13,0	./.	./.	1/1:5,0:2:2.52:22,3,0	0/1:5,0:3:0:0,0,0	./.	./.	1/1:6,0:2:1.24:19,1,0	0/1:4,0:3:0:0,0,0	./.	0/0:2,0:2:2.44:0,2,6	0/0:2,0:1:0.47:0,0,1	./.	1/1:9,0:5:12.04:138,12,0	1/1:10,0:4:2.90:16,3,0	0/1:3,0:1:0:0,0,0	./.	./.	0/0:18,0:17:38.61:0,39,1027	0/1:5,0:2:0:0,0,0	1/1:1,0:1:1.55:4,2,0	./.
chr10	12095601	.	GCACA	G	246.24	PASS	AB=1.000;AC=11;AF=0.239;AN=46;BaseQRankSum=5.008;DP=301;FS=9.728;HRun=0;HaplotypeScore=62.5186;InbreedingCoeff=0.5628;MQ=46.55;MQ0=32;MQRankSum=-2.466;QD=4.92;ReadPosRankSum=-0.645;VQSLOD=0.2218;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:93.29:0,93,2166	0/0:5,0:2:3:0,3,25	0/0:50,0:16:19.57:0,20,362	0/0:48,0:13:24.68:0,25,577	0/0:13,0:8:3.24:0,3,24	0/0:5,0:4:8.96:0,9,100	1/1:5,6:10:13.37:162,13,0	./.	0/0:6,0:5:0.89:0,1,2	0/0:9,0:6:14.92:0,15,118	0/1:5,0:3:0:0,0,0	./.	0/0:8,0:3:5.95:0,6,43	0/0:5,0:3:3.84:0,4,20	0/1:5,0:5:0:0,0,0	./.	0/0:4,0:4:11.87:0,12,84	0/0:4,0:3:8.94:0,9,66	1/1:2,0:1:3:27,3,0	1/1:14,0:6:15.02:145,15,0	1/1:8,0:4:2.88:36,3,0	0/1:5,0:3:0:0,0,0	0/0:4,0:1:2.94:0,3,18	./.	0/0:18,0:18:45.13:0,45,1047	0/0:7,0:4:8.47:0,8,63	0/0:7,0:7:10.79:0,11,85	./.
chr10	12095619	.	TAC	T	431.58	PASS	AC=6;AF=0.111;AN=54;BaseQRankSum=4.086;DP=345;FS=0.000;HRun=0;HaplotypeScore=67.5502;InbreedingCoeff=0.6710;MQ=58.45;MQ0=22;MQRankSum=-0.461;QD=12.33;ReadPosRankSum=-1.583;VQSLOD=2.7369;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,105,1804	0/0:5,0:2:6.02:0,6,105	0/0:26,0:15:26.24:0,26,366	0/0:28,1:14:22.28:0,22,253	0/0:16,0:11:12.03:0,12,209	0/0:17,0:15:30.10:0,30,508	0/0:16,0:14:5.79:0,6,70	./.	0/0:8,0:7:15.05:0,15,264	0/0:14,0:11:30.10:0,30,520	0/0:7,0:5:9.03:0,9,155	0/0:7,0:3:9.03:0,9,158	0/0:10,0:5:15.05:0,15,265	0/0:7,0:5:15.05:0,15,263	0/0:6,0:6:11.63:0,12,209	0/0:2,0:1:3.01:0,3,53	0/0:11,0:11:30.10:0,30,481	0/0:8,0:7:21.07:0,21,372	1/1:0,5:3:9.01:105,9,0	1/1:4,19:14:30.02:377,30,0	1/1:1,6:3:6.02:76,6,0	0/0:8,0:6:11.63:0,12,210	0/0:10,0:7:18.06:0,18,317	0/0:2,0:2:6.02:0,6,87	0/0:19,0:19:39.10:0,39,659	0/0:12,0:9:27.09:0,27,473	0/0:16,0:16:45.15:0,45,791	0/0:5,0:1:3.01:0,3,53
chr10	12096673	.	GATCAT	G	3689.42	PASS	AB=0.787;AC=6;AF=0.115;AN=52;BaseQRankSum=2.217;DP=731;FS=1.797;HRun=0;HaplotypeScore=107.4922;InbreedingCoeff=-0.1533;MQ=36.77;MQ0=73;MQRankSum=-3.568;QD=13.18;ReadPosRankSum=-1.424;VQSLOD=2.6647;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:42:36.12:0,36,1174	0/0:11,0:11:30.10:0,30,936	./.	./.	0/0:17,0:16:5.59:0,6,199	0/1:26,12:33:99:710,0,739	0/1:28,7:25:99:444,0,751	0/1:20,10:17:99:481,0,752	0/0:22,0:21:24.08:0,24,790	0/0:13,0:13:33.11:0,33,1094	0/0:16,0:15:9.03:0,9,298	0/0:18,0:17:23.88:0,24,761	0/0:15,0:14:14.92:0,15,494	0/0:26,0:25:24.08:0,24,794	0/0:29,0:29:27.09:0,27,896	0/0:15,0:12:12.04:0,12,398	0/0:31,0:24:12.04:0,12,399	0/0:22,0:20:23.79:0,24,792	0/1:35,11:24:99:559,0,1301	0/1:41,15:52:99:666,0,2050	0/1:54,21:56:99:829,0,810	0/0:12,0:12:15.05:0,15,490	0/0:14,0:12:3.01:0,3,100	0/0:36,0:31:15.05:0,15,498	0/0:25,0:25:27.09:0,27,896	0/0:20,0:19:57.20:0,57,1788	0/0:15,0:14:24.08:0,24,785	0/0:9,0:8:18.06:0,18,599
chr10	12098669	.	CT	C	3713.97	PASS	AB=0.818;AC=46;AF=0.821;AN=56;BaseQRankSum=7.035;DP=417;FS=18.513;HRun=9;HaplotypeScore=63.1546;InbreedingCoeff=0.5617;MQ=48.65;MQ0=62;MQRankSum=-8.170;QD=10.64;ReadPosRankSum=-3.373;VQSLOD=0.2667;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:27:39.06:0,39,434	1/1:2,2:2:5.98:48,6,0	0/0:16,0:8:20.86:0,21,192	0/0:7,0:1:3.01:0,3,33	1/1:1,9:7:8.94:82,9,0	0/1:35,15:45:99:237,0,428	0/1:10,2:11:3.53:4,0,198	1/1:12,20:17:42:376,42,0	1/1:3,4:6:17.94:150,18,0	1/1:3,8:7:18.01:164,18,0	1/1:1,8:5:9:82,9,0	1/1:0,3:3:9:82,9,0	1/1:0,3:3:9:82,9,0	1/1:3,4:6:11.99:104,12,0	1/1:2,4:5:9:82,9,0	1/1:0,6:3:5.97:47,6,0	1/1:4,3:5:3:27,3,0	1/1:1,4:2:5.96:47,6,0	1/1:12,20:21:47.97:427,48,0	1/1:15,52:41:95.68:814,96,0	1/1:3,4:6:8.95:74,9,0	1/1:6,8:11:8.99:82,9,0	1/1:2,7:7:12:110,12,0	1/1:1,8:6:14.97:130,15,0	0/0:16,0:14:30.09:0,30,346	1/1:3,11:10:24.01:220,24,0	1/1:4,13:9:21:188,21,0	1/1:0,6:3:6:55,6,0
chr10	12098699	.	GC	G	10773.69	PASS	AB=0.762;AC=46;AF=0.852;AN=54;BaseQRankSum=6.805;DP=468;FS=1.297;HRun=1;HaplotypeScore=58.2974;InbreedingCoeff=0.6145;MQ=50.44;MQ0=41;MQRankSum=-6.254;QD=26.54;ReadPosRankSum=-1.281;VQSLOD=4.3478;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:63.17:0,63,953	1/1:0,6:5:15.05:210,15,0	0/0:12,0:5:2.56:0,3,87	./.	1/1:0,14:9:18.06:250,18,0	0/1:26,16:39:99:315,0,462	0/1:9,3:11:59.65:60,0,263	1/1:3,33:27:78.22:1035,78,0	1/1:0,11:10:21.07:294,21,0	1/1:0,13:10:30.10:419,30,0	1/1:1,19:16:33.07:438,33,0	1/1:0,6:6:15.05:208,15,0	1/1:0,11:11:33.11:457,33,0	1/1:0,11:10:30.10:419,30,0	1/1:0,8:8:21.07:293,21,0	1/1:0,8:6:14.95:209,15,0	1/1:1,11:11:24.08:334,24,0	1/1:0,7:5:15.05:209,15,0	1/1:3,33:30:87.27:1197,87,0	1/1:0,75:54:99:2192,159,0	1/1:4,6:8:21.03:244,21,0	1/1:0,11:8:21.07:292,21,0	1/1:0,12:11:24.08:334,24,0	1/1:0,10:8:18.06:251,18,0	0/0:17,0:15:21.54:0,22,336	1/1:1,13:11:33.10:443,33,0	1/1:0,13:11:33.11:460,33,0	1/1:0,8:5:15.05:209,15,0
chr10	12099104	.	C	CT	9551.60	PASS	AB=0.727;AC=42;AF=0.750;AN=56;BaseQRankSum=-1.992;DP=610;FS=1.094;HRun=7;HaplotypeScore=75.5906;InbreedingCoeff=0.4015;MQ=60.65;MQ0=2;MQRankSum=-1.575;QD=17.79;ReadPosRankSum=3.649;VQSLOD=4.7407;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:56.79:0,57,599	1/1:1,9:10:27.08:326,27,0	0/0:11,1:9:16.19:0,16,153	0/0:5,0:4:9.01:0,9,86	1/1:2,15:18:39.12:463,39,0	0/1:9,18:26:99:345,0,149	0/1:6,8:13:99:214,0,134	0/1:32,18:49:99:531,0,513	1/1:0,13:13:33.10:395,33,0	1/1:1,18:19:54.14:630,54,0	1/1:1,14:15:36.11:435,36,0	1/1:1,15:16:33.10:399,33,0	1/1:0,11:11:14.96:165,15,0	1/1:3,12:14:27.08:324,27,0	1/1:0,15:15:30.09:362,30,0	1/1:4,13:16:36.08:417,36,0	1/1:1,8:9:24.07:290,24,0	1/1:0,13:13:39.08:455,39,0	0/1:43,23:63:99:630,0,679	0/1:60,15:69:99:321,0,1294	0/1:24,7:31:99:175,0,457	1/1:3,21:24:54.16:649,54,0	1/1:5,14:18:36.11:435,36,0	1/1:2,3:5:9.03:109,9,0	0/0:26,0:26:63.09:0,63,608	1/1:3,18:21:54.17:652,54,0	1/1:3,17:20:42.13:504,42,0	1/1:0,14:14:27.08:326,27,0
chr10	12099197	.	TTCAC	T	236.33	PASS	AB=0.973;AC=15;AF=0.278;AN=54;BaseQRankSum=4.369;DP=407;FS=4.301;HRun=0;HaplotypeScore=99.4269;InbreedingCoeff=0.0664;MQ=43.56;MQ0=4;MQRankSum=-3.945;QD=1.85;ReadPosRankSum=-3.932;VQSLOD=0.8096;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:87.30:0,87,2363	0/1:6,0:5:0.64:33,0,1	0/0:12,0:10:30.07:0,30,643	0/0:17,0:14:39.13:0,39,991	0/1:10,0:6:8.90:9,0,10	0/1:20,0:17:4.38:4,0,755	0/0:13,1:13:33.20:0,33,756	0/0:24,0:24:63.32:0,63,1592	0/1:8,0:7:9.49:53,0,9	0/0:3,0:2:3.28:0,3,8	0/0:7,1:6:10.51:0,11,45	0/1:9,0:4:15.34:17,0,15	1/1:8,0:5:2.07:50,2,0	0/0:7,0:5:7.69:0,8,29	0/1:8,0:5:9.73:16,0,10	0/1:6,0:5:5.92:10,0,6	0/1:4,1:5:3.95:36,0,4	0/0:6,0:6:8.70:0,9,25	0/0:36,0:34:91.86:0,92,2517	0/0:52,0:51:99:0,115,2884	0/0:34,0:34:90.03:0,90,2426	0/0:12,0:8:14.44:0,14,49	0/1:7,0:6:11.58:12,0,21	0/1:9,0:8:15.73:16,0,24	0/0:18,0:18:45.14:0,45,1205	1/1:9,2:5:1.91:119,2,0	0/1:20,0:6:8.03:8,0,9	./.
chr10	12099202	.	C	CT	3558.53	PASS	AB=0.833;AC=40;AF=0.714;AN=56;BaseQRankSum=13.578;DP=433;FS=18.825;HRun=0;HaplotypeScore=80.8003;InbreedingCoeff=0.5364;MQ=43.50;MQ0=4;MQRankSum=-11.251;QD=12.53;ReadPosRankSum=1.027;VQSLOD=2.5467;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:90.18:0,90,1173	1/1:4,2:5:5.95:63,6,0	0/0:7,0:7:18.01:0,18,228	0/0:16,0:14:36.04:0,36,430	1/1:1,9:6:6.01:91,6,0	0/1:16,7:20:70.82:71,0,377	0/1:13,4:16:99:114,0,328	0/1:21,3:24:87.21:87,0,614	1/1:2,4:6:18.02:232,18,0	1/1:1,3:3:9.03:135,9,0	1/1:4,7:9:12.04:181,12,0	1/1:1,8:4:9.03:126,9,0	1/1:2,6:5:8.91:82,9,0	1/1:1,6:5:12.04:178,12,0	1/1:2,7:6:15:201,15,0	1/1:4,4:6:12.04:168,12,0	1/1:6,3:9:17.97:221,18,0	1/1:0,6:6:18.06:272,18,0	0/0:38,3:37:56.49:0,56,1250	0/1:44,8:51:69.54:70,0,1267	0/0:30,2:31:50.52:0,51,1099	1/1:1,12:9:18.06:273,18,0	1/1:4,6:9:21.07:298,21,0	1/1:4,9:12:24.06:314,24,0	0/0:18,0:18:48.10:0,48,604	1/1:5,8:6:7.24:155,7,0	1/1:2,19:7:12.04:182,12,0	1/1:2,2:1:3.01:43,3,0
chr10	12099242	.	A	AT	6657.49	PASS	AB=0.802;AC=41;AF=0.732;AN=56;BaseQRankSum=14.262;DP=442;FS=25.328;HRun=1;HaplotypeScore=82.0543;InbreedingCoeff=0.5043;MQ=57.81;MQ0=1;MQRankSum=-6.800;QD=19.87;ReadPosRankSum=3.400;VQSLOD=3.7206;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:84.27:0,84,1090	1/1:0,7:7:18.06:269,18,0	0/0:9,0:8:24.08:0,24,312	0/0:8,0:7:18.06:0,18,234	1/1:1,8:6:6.01:90,6,0	0/1:10,10:18:99:314,0,213	0/1:12,11:21:99:334,0,365	0/1:21,3:24:20.58:21,0,735	1/1:2,9:10:18.06:268,18,0	1/1:0,5:4:12.04:172,12,0	1/1:1,6:6:12.04:178,12,0	1/1:1,9:7:21.07:314,21,0	1/1:2,5:6:15.05:225,15,0	1/1:1,8:8:21.07:304,21,0	1/1:1,13:13:27.09:403,27,0	1/1:0,15:15:39.13:583,39,0	1/1:2,15:16:33.11:488,33,0	1/1:1,9:9:15.05:225,15,0	0/1:25,3:27:11.45:11,0,850	0/1:36,6:41:85.62:86,0,952	0/0:33,3:35:49.08:0,49,1117	1/1:0,18:15:45.11:648,45,0	1/1:0,8:6:15.05:224,15,0	1/1:2,13:14:32.92:494,33,0	0/0:19,0:19:42.14:0,42,542	1/1:4,13:12:36.12:513,36,0	1/1:0,16:10:27.09:404,27,0	1/1:0,3:2:6.02:90,6,0
chr10	12099934	.	CGTTGTTTTTG	C	5629.32	PASS	AB=0.814;AC=29;AF=0.763;AN=38;BaseQRankSum=8.570;DP=409;FS=0.000;HRun=0;HaplotypeScore=91.5443;InbreedingCoeff=0.0751;MQ=18.76;MQ0=209;MQRankSum=-4.478;QD=19.34;ReadPosRankSum=4.810;VQSLOD=3.0994;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:16:33.11:0,33,1530	./.	./.	./.	1/1:6,3:1:3.01:60,3,0	0/1:36,5:22:99:348,0,1659	0/1:25,1:8:80.30:80,0,881	1/1:12,3:3:9.03:308,9,0	0/1:7,4:2:53.73:96,0,54	./.	1/1:15,1:1:3.01:99,3,0	1/1:10,5:1:3.01:101,3,0	1/1:9,3:2:6.02:205,6,0	1/1:6,6:3:9.03:305,9,0	1/1:8,7:2:6.02:204,6,0	./.	1/1:11,4:4:12.04:401,12,0	1/1:0,1:1:3.01:102,3,0	1/1:31,10:8:24.07:746,24,0	0/1:6,18:20:99:1778,0,101	1/1:11,6:7:21.05:603,21,0	./.	./.	0/1:9,1:4:88.73:89,0,204	0/0:23,0:11:24.07:0,24,1173	./.	1/1:10,1:1:3.01:103,3,0	./.
chr10	12099947	.	AGCT	A	2556.45	PASS	AB=0.817;AC=31;AF=0.816;AN=38;BaseQRankSum=7.457;DP=447;FS=2.091;HRun=0;HaplotypeScore=80.9058;InbreedingCoeff=0.1821;MQ=15.83;MQ0=261;MQRankSum=-1.791;QD=8.17;ReadPosRankSum=2.716;VQSLOD=2.8519;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:12:18.06:0,18,419	./.	./.	./.	1/1:13,3:1:3.01:39,3,0	0/1:36,5:18:99:165,0,530	0/1:23,1:8:28.59:29,0,403	1/1:7,3:3:9.03:153,9,0	1/1:8,4:2:3.01:51,3,0	./.	1/1:19,1:1:3.01:48,3,0	1/1:11,5:1:3.01:50,3,0	1/1:14,3:2:6.02:101,6,0	1/1:6,6:3:9.03:149,9,0	1/1:8,7:2:6.02:100,6,0	./.	1/1:12,4:4:12.04:194,12,0	1/1:0,1:1:3.01:51,3,0	1/1:36,10:7:21.07:358,21,0	0/1:9,18:19:13.47:828,0,13	1/1:11,6:6:17.98:265,18,0	./.	./.	1/1:8,1:2:3.01:49,3,0	0/0:26,0:10:21.07:0,21,496	./.	1/1:13,1:1:3.01:51,3,0	./.
chr10	12100247	.	TC	T	679.87	PASS	AB=0.822;AC=19;AF=0.594;AN=32;BaseQRankSum=6.422;DP=379;FS=5.402;HRun=2;HaplotypeScore=27.3862;InbreedingCoeff=0.3502;MQ=17.24;MQ0=183;MQRankSum=-2.435;QD=4.30;ReadPosRankSum=-0.532;VQSLOD=0.3092;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:6:12.04:0,12,179	./.	./.	./.	./.	0/0:22,4:11:12.04:0,12,179	0/1:13,4:6:26.83:27,0,122	0/1:12,3:8:53.79:54,0,246	./.	1/1:5,3:3:9.03:117,9,0	./.	1/1:7,3:2:3.01:39,3,0	1/1:3,6:3:6.02:78,6,0	1/1:7,6:4:3.01:39,3,0	1/1:4,7:5:3.01:39,3,0	./.	1/1:7,1:3:3.01:39,3,0	./.	0/1:29,8:17:99:147,0,438	0/0:35,1:18:15.05:0,15,224	0/0:39,1:10:15.05:0,15,224	./.	./.	./.	0/0:14,0:12:9.03:0,9,135	1/1:6,9:8:8.87:117,9,0	1/1:9,6:4:9.03:117,9,0	./.
chr10	12100467	.	C	CCAGCA	554.61	PASS	AB=0.805;AC=13;AF=0.406;AN=32;BaseQRankSum=5.262;DP=327;FS=2.702;HRun=0;HaplotypeScore=82.1224;InbreedingCoeff=0.5241;MQ=67.30;MQ0=3;MQRankSum=-4.958;QD=7.49;ReadPosRankSum=0.597;VQSLOD=1.6544;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:66.18:0,66,1372	./.	0/0:19,0:17:51.07:0,51,1048	0/0:21,0:21:54.16:0,54,1067	./.	0/1:32,4:32:11:11,0,1556	0/0:16,4:17:42.14:0,42,936	0/0:27,0:26:78.22:0,78,1652	1/1:3,0:2:6.02:124,6,0	./.	./.	1/1:2,0:2:3.01:92,3,0	1/1:2,2:2:6.02:127,6,0	./.	./.	./.	./.	1/1:0,3:1:3.01:93,3,0	0/0:30,1:30:81.25:0,81,1708	0/0:69,2:68:99:0,190,4175	0/1:16,1:17:44.11:44,0,896	./.	./.	0/1:1,3:2:0:0,0,0	0/0:19,0:19:57.17:0,57,1219	1/1:2,3:4:6.02:188,6,0	./.	./.
chr10	12100470	.	T	TGGA	121.47	PASS	AB=0.806;AC=6;AF=0.214;AN=28;BaseQRankSum=3.812;DP=311;FS=4.314;HRun=0;HaplotypeScore=83.8419;InbreedingCoeff=0.5532;MQ=67.46;MQ0=2;MQRankSum=-3.538;QD=4.19;ReadPosRankSum=1.501;VQSLOD=1.5318;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:69.19:0,69,1233	./.	0/0:21,0:17:51.15:0,51,843	0/0:21,0:21:60.18:0,60,992	./.	0/0:31,4:31:12.32:0,12,1332	0/0:16,4:18:44.93:0,45,786	0/0:26,0:25:72.25:0,72,1333	./.	./.	./.	./.	./.	./.	./.	./.	./.	1/1:0,3:1:3.01:67,3,0	0/0:31,1:31:90.31:0,90,1637	0/0:63,2:63:99:0,187,3410	0/1:16,1:17:14.82:15,0,800	./.	./.	0/0:0,3:2:0:0,0,0	0/0:20,0:20:57.20:0,57,1046	1/1:0,3:2:6.02:135,6,0	0/1:3,3:3:0:0,0,0	./.
chr10	12100554	.	G	GGAAT	10620.16	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=2.142;DP=529;FS=0.395;HRun=0;HaplotypeScore=85.1763;InbreedingCoeff=0.9109;MQ=42.00;MQ0=21;MQRankSum=-6.618;QD=47.41;ReadPosRankSum=4.412;VQSLOD=5.5278;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:83.07:0,83,1307	1/1:2,2:4:3.01:58,3,0	0/0:22,0:9:24.05:0,24,356	0/0:11,0:4:12.02:0,12,195	1/1:4,12:15:32.94:648,33,0	0/0:47,0:40:69.19:0,69,1181	0/0:25,0:22:63.15:0,63,1107	0/0:36,0:25:57.10:0,57,825	1/1:6,10:12:33.03:728,33,0	1/1:3,12:14:39.13:966,39,0	1/1:1,6:6:12.04:323,12,0	1/1:5,5:9:20.87:376,21,0	1/1:4,11:14:39.13:936,39,0	1/1:1,14:12:18.06:471,18,0	1/1:3,8:8:21.07:519,21,0	1/1:4,17:17:36.06:905,36,0	1/1:1,1:2:5.95:99,6,0	1/1:0,4:4:9.03:242,9,0	0/0:33,0:21:57.17:0,57,966	0/0:44,0:43:72.15:0,72,1505	0/0:22,0:22:45.40:0,45,652	1/1:3,16:17:30.05:745,30,0	1/1:2,7:6:15.05:377,15,0	1/1:3,10:11:24.08:616,24,0	0/0:28,0:27:63.16:0,63,1097	1/1:2,9:10:30.06:705,30,0	1/1:11,21:26:75.25:1826,75,0	1/1:0,1:1:3.01:81,3,0
chr10	12100605	.	G	GAAGCAAGC	6845.40	PASS	AC=42;AF=0.840;AN=50;BaseQRankSum=3.289;DP=421;FS=11.145;HRun=0;HaplotypeScore=101.0216;InbreedingCoeff=0.6232;MQ=43.95;MQ0=27;MQRankSum=-8.541;QD=21.94;ReadPosRankSum=2.289;VQSLOD=3.2763;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:87.30:0,87,2184	./.	0/0:17,0:9:12.03:0,12,190	0/0:20,0:18:26.45:0,26,493	1/1:4,4:6:9.03:324,9,0	1/1:9,1:37:23.75:470,24,0	1/1:9,0:12:24.08:413,24,0	1/1:19,0:20:15.01:180,15,0	1/1:6,7:7:6.02:254,6,0	1/1:7,4:8:9.03:381,9,0	1/1:4,1:4:3.01:127,3,0	1/1:4,3:6:6.02:254,6,0	1/1:3,5:7:12.04:493,12,0	1/1:12,3:8:3.01:37,3,0	1/1:9,6:10:3.01:127,3,0	1/1:9,2:8:6.02:163,6,0	1/1:2,3:4:9.03:321,9,0	./.	1/1:19,1:34:44.98:1045,45,0	1/1:9,1:21:9.03:316,9,0	1/1:7,0:13:8.57:221,9,0	1/1:10,5:12:6.02:253,6,0	./.	1/1:4,3:6:6.02:253,6,0	0/0:22,0:21:42.14:0,42,1062	1/1:7,3:8:3.01:127,3,0	1/1:9,15:15:24.08:1014,24,0	1/1:3,1:3:6.02:76,6,0
chr10	12101172	.	CT	C	312.57	PASS	AC=6;AF=0.273;AN=22;BaseQRankSum=5.342;DP=177;FS=6.422;HRun=9;HaplotypeScore=40.1569;InbreedingCoeff=0.8214;MQ=64.23;MQ0=1;MQRankSum=-0.752;QD=14.21;ReadPosRankSum=2.489;VQSLOD=2.8965;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,1:19:26.71:0,27,560	./.	1/1:5,0:4:1.24:3,1,0	0/0:6,0:6:9.02:0,9,97	./.	1/1:0,10:10:27.01:247,27,0	1/1:1,6:7:18.01:165,18,0	0/0:32,0:27:66.20:0,66,762	./.	0/0:4,0:4:0:0,0,0	./.	./.	./.	./.	./.	./.	./.	./.	0/0:22,0:21:51.13:0,51,575	0/0:24,0:22:51.15:0,51,589	0/0:9,0:9:24.05:0,24,263	./.	./.	./.	0/0:12,0:12:27.08:0,27,312	./.	./.	./.
chr10	12106214	.	AC	A	1888.33	PASS	AB=0.944;AC=17;AF=0.708;AN=24;BaseQRankSum=1.543;DP=253;FS=0.000;HRun=1;HaplotypeScore=46.7197;InbreedingCoeff=0.6374;MQ=60.35;MQ0=21;MQRankSum=-0.502;QD=12.18;ReadPosRankSum=0.654;VQSLOD=1.8908;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:32.43:0,32,392	./.	0/0:33,1:15:15.03:0,15,251	0/0:27,3:12:5.45:0,5,140	./.	1/1:13,0:8:20.71:157,21,0	1/1:12,0:6:17.91:139,18,0	1/1:5,15:15:44.90:368,45,0	./.	./.	./.	./.	./.	1/1:1,0:1:0.47:1,0,0	./.	./.	./.	1/1:2,0:2:2.37:8,2,0	1/1:9,23:24:57.24:453,57,0	1/1:52,0:52:99:755,100,0	1/1:5,1:5:13.81:107,14,0	./.	./.	./.	0/1:16,1:16:15.46:15,0,98	./.	./.	./.
chr10	12106484	.	A	AT	358.42	PASS	AC=14;AF=0.389;AN=36;BaseQRankSum=5.708;DP=360;FS=2.658;HRun=1;HaplotypeScore=38.1557;InbreedingCoeff=0.7344;MQ=55.72;MQ0=20;MQRankSum=-4.612;QD=13.79;ReadPosRankSum=2.143;VQSLOD=2.8867;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:66.21:0,66,905	./.	0/0:16,0:6:17.92:0,18,222	0/0:24,0:11:30.10:0,30,408	./.	0/0:26,3:26:54.18:0,54,755	0/0:13,3:13:39.10:0,39,524	0/0:19,2:16:48.15:0,48,654	./.	1/1:0,1:1:3.01:48,3,0	./.	./.	./.	1/1:0,5:1:3.01:48,3,0	1/1:0,5:2:6.02:95,6,0	1/1:0,2:1:3.01:48,3,0	1/1:1,2:3:6.02:95,6,0	1/1:2,3:3:3.01:48,3,0	0/0:44,2:33:90.23:0,90,1173	0/0:52,8:56:99:0,147,2030	0/0:20,0:20:27.71:0,28,748	./.	./.	0/0:1,3:2:1.55:0,2,4	0/0:34,0:33:74.94:0,75,1031	1/1:1,4:3:8.98:114,9,0	./.	./.
chr10	12106572	.	A	AG	843.28	PASS	AB=0.857;AC=23;AF=0.605;AN=38;BaseQRankSum=7.570;DP=328;FS=59.582;HRun=2;HaplotypeScore=34.2284;InbreedingCoeff=0.6308;MQ=39.96;MQ0=60;MQRankSum=-6.548;QD=12.97;ReadPosRankSum=3.414;VQSLOD=-0.3416;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:42:39.07:0,39,434	./.	./.	./.	./.	0/1:25,5:22:27.90:28,0,133	0/0:16,0:14:30.03:0,30,341	0/0:16,0:6:18.06:0,18,222	1/1:0,3:2:6.02:86,6,0	./.	./.	1/1:0,5:5:15.05:215,15,0	1/1:1,2:1:3.01:43,3,0	1/1:1,3:3:9.03:129,9,0	1/1:2,4:4:12.04:172,12,0	1/1:1,2:2:6.02:86,6,0	1/1:1,1:2:3:29,3,0	./.	0/0:45,0:25:75.22:0,75,909	0/0:45,0:44:99:0,108,1320	0/0:33,0:29:60.18:0,60,730	./.	./.	1/1:0,1:1:3.01:43,3,0	0/0:20,0:18:27.08:0,27,334	1/1:0,2:2:6.02:86,6,0	1/1:0,4:2:3.01:43,3,0	1/1:0,1:1:3.01:37,3,0
chr10	12107044	.	CACTT	C	3153.73	PASS	AC=8;AF=0.400;AN=20;BaseQRankSum=8.617;DP=233;FS=8.491;HRun=0;HaplotypeScore=112.7267;InbreedingCoeff=0.9762;MQ=64.53;MQ0=11;MQRankSum=-2.842;QD=34.66;ReadPosRankSum=2.901;VQSLOD=3.5904;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,102,2685	./.	0/0:24,0:18:42.16:0,42,1201	0/0:16,0:15:39.13:0,39,1006	./.	0/0:20,0:19:45.14:0,45,1157	0/0:22,0:19:45.15:0,45,1073	1/1:4,3:5:9.03:171,9,0	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	1/1:3,16:16:45.15:824,45,0	1/1:0,31:24:63.22:1176,63,0	1/1:3,30:32:60.16:1101,60,0	./.	./.	./.	0/0:19,0:19:26.51:0,27,727	./.	./.	./.
chr10	12107101	.	A	AC	257.57	PASS	AC=10;AF=0.357;AN=28;BaseQRankSum=5.028;DP=298;FS=31.092;HRun=2;HaplotypeScore=71.4440;InbreedingCoeff=0.7543;MQ=42.17;MQ0=57;MQRankSum=-4.221;QD=28.62;ReadPosRankSum=2.348;VQSLOD=1.8100;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:35:90.28:0,90,1114	./.	0/0:25,0:1:3.01:0,3,37	./.	./.	0/0:21,0:19:36.11:0,36,446	0/0:17,0:14:30.09:0,30,372	0/0:25,0:12:30.09:0,30,371	./.	1/1:0,2:2:6.02:84,6,0	./.	./.	1/1:0,1:1:3.01:42,3,0	./.	./.	./.	./.	./.	0/0:39,0:31:84.26:0,84,1041	0/0:35,0:30:72.23:0,72,890	0/0:38,0:37:78.24:0,78,966	1/1:0,2:2:6.02:84,6,0	./.	./.	0/0:26,0:25:29.81:0,30,354	1/1:0,3:3:9.03:126,9,0	1/1:0,1:1:3.01:42,3,0	./.
chr10	12107285	.	C	CAA	3668.06	PASS	AC=34;AF=0.680;AN=50;BaseQRankSum=10.069;DP=386;FS=6.254;HRun=7;HaplotypeScore=52.4605;InbreedingCoeff=0.8612;MQ=36.24;MQ0=80;MQRankSum=-5.279;QD=33.96;ReadPosRankSum=-1.957;VQSLOD=2.8851;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:27:43.66:0,44,481	1/1:0,4:4:9.03:148,9,0	./.	./.	1/1:0,7:4:6.02:98,6,0	0/0:19,0:18:27.06:0,27,304	0/0:10,0:7:9.03:0,9,105	0/0:25,0:3:8.99:0,9,91	1/1:0,5:3:9.03:148,9,0	1/1:0,6:3:9.03:148,9,0	1/1:1,8:6:9.03:148,9,0	1/1:0,4:4:12.04:197,12,0	1/1:0,6:6:18.06:295,18,0	1/1:0,5:5:15.05:246,15,0	1/1:0,2:2:6.02:98,6,0	1/1:0,3:3:9.03:148,9,0	1/1:1,5:5:15.01:217,15,0	1/1:0,8:8:23.57:353,24,0	0/0:37,0:22:62.92:0,63,711	0/0:68,0:66:95.40:0,95,1632	0/0:24,0:23:48.14:0,48,558	1/1:0,11:11:24.08:393,24,0	1/1:0,10:6:9.03:148,9,0	1/1:0,5:4:12.04:197,12,0	0/0:13,0:12:21.06:0,21,244	1/1:1,11:11:30.10:492,30,0	1/1:0,4:4:12.04:197,12,0	./.
chr10	12107773	.	C	CT	7683.82	PASS	AC=44;AF=0.846;AN=52;BaseQRankSum=6.315;DP=362;FS=26.097;HRun=1;HaplotypeScore=71.7227;InbreedingCoeff=0.7848;MQ=51.10;MQ0=6;MQRankSum=-8.830;QD=28.78;ReadPosRankSum=0.585;VQSLOD=3.1684;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:69.20:0,69,875	1/1:2,3:5:9.03:134,9,0	0/0:27,0:26:71.78:0,72,856	0/0:21,0:20:48.23:0,48,717	1/1:1,5:6:14.96:162,15,0	1/1:1,32:31:81.27:1196,81,0	1/1:2,6:7:8.99:109,9,0	1/1:4,20:12:27.07:376,27,0	1/1:1,9:5:9.03:129,9,0	1/1:1,8:7:21.05:292,21,0	1/1:0,6:6:17.97:217,18,0	1/1:0,5:3:9.03:125,9,0	1/1:0,8:8:21.07:306,21,0	1/1:0,4:2:6.02:89,6,0	1/1:0,8:6:15.05:213,15,0	1/1:1,6:6:18.03:245,18,0	./.	./.	1/1:4,19:16:45.14:651,45,0	1/1:2,70:60:99:2271,159,0	1/1:0,9:5:9.03:135,9,0	1/1:1,7:8:18.06:267,18,0	1/1:1,5:6:14.92:149,15,0	1/1:0,1:1:3.01:34,3,0	0/0:16,0:16:24.08:0,24,308	1/1:1,9:10:27.09:403,27,0	1/1:0,3:3:9.03:133,9,0	1/1:0,2:2:3.01:45,3,0
chr10	12108303	.	CTTG	C	4773.99	PASS	AB=0.739;AC=41;AF=0.732;AN=56;BaseQRankSum=11.170;DP=536;FS=25.577;HRun=0;HaplotypeScore=67.2703;InbreedingCoeff=0.3646;MQ=43.30;MQ0=32;MQRankSum=-2.648;QD=12.06;ReadPosRankSum=2.823;VQSLOD=2.3945;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:27:12.04:0,12,268	1/1:0,8:6:11.98:192,12,0	0/0:44,0:3:9.03:0,9,150	0/0:21,0:4:8.85:0,9,82	1/1:0,26:21:30.10:490,30,0	0/1:19,8:20:99:212,0,357	0/1:14,13:22:99:396,0,101	0/0:26,8:27:16.24:0,16,1135	1/1:1,7:6:12.04:171,12,0	1/1:5,11:13:24.08:392,24,0	1/1:0,17:13:18.06:294,18,0	1/1:2,6:4:6.02:98,6,0	1/1:3,8:9:9.03:147,9,0	1/1:1,5:5:12.04:196,12,0	1/1:1,11:9:21.07:331,21,0	1/1:1,7:4:6.02:98,6,0	1/1:3,7:5:9.03:147,9,0	1/1:2,1:2:3.01:49,3,0	0/1:52,15:52:99:290,0,1832	0/1:39,20:51:99:320,0,1859	0/1:15,13:18:36.96:37,0,189	1/1:1,11:11:21.07:335,21,0	1/1:0,11:6:9.03:147,9,0	1/1:1,7:4:6.02:94,6,0	0/0:12,0:11:24.08:0,24,536	1/1:1,8:5:15.05:245,15,0	1/1:2,7:6:3.01:49,3,0	1/1:1,5:2:3.01:45,3,0
chr10	12108728	.	CA	C	2543.86	PASS	AB=0.812;AC=42;AF=0.750;AN=56;BaseQRankSum=12.019;DP=561;FS=3.688;HRun=2;HaplotypeScore=54.6312;InbreedingCoeff=0.2558;MQ=42.92;MQ0=87;MQRankSum=-6.492;QD=5.70;ReadPosRankSum=-2.427;VQSLOD=-0.0765;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:49:99:0,136,1977	1/1:1,8:2:3.01:37,3,0	0/0:29,0:4:9.03:0,9,110	0/0:24,0:5:9.03:0,9,133	1/1:2,17:16:18.06:222,18,0	0/1:19,10:25:82.24:82,0,724	0/1:18,16:24:99:168,0,460	0/1:26,4:20:60.36:60,0,578	1/1:0,16:8:12.04:148,12,0	1/1:1,3:2:3.01:37,3,0	1/1:3,6:4:6.02:74,6,0	1/1:0,10:4:9.03:111,9,0	1/1:2,9:6:6.02:74,6,0	1/1:0,11:5:12.04:148,12,0	1/1:0,12:9:15.05:185,15,0	1/1:0,12:5:12.04:148,12,0	1/1:1,20:12:21.07:260,21,0	1/1:1,12:9:18.06:223,18,0	0/1:36,4:25:8.16:8,0,833	0/1:40,6:42:11.82:12,0,1204	0/1:34,14:43:99:195,0,1065	1/1:0,4:2:3.01:37,3,0	1/1:1,12:8:9.03:111,9,0	1/1:0,22:15:9.03:111,9,0	0/0:11,0:11:27.09:0,27,405	1/1:4,8:2:3.01:37,3,0	1/1:3,16:9:15.05:185,15,0	1/1:0,2:1:3.01:37,3,0
chr10	12109298	.	AC	A	65.26	PASS	AB=0.600;AC=5;AF=0.114;AN=44;BaseQRankSum=3.964;DP=321;FS=6.590;HRun=4;HaplotypeScore=39.9748;InbreedingCoeff=0.2475;MQ=54.30;MQ0=14;MQRankSum=-2.462;QD=6.53;ReadPosRankSum=0.161;VQSLOD=-0.2715;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:69.22:0,69,948	./.	0/0:25,0:7:9.73:0,10,145	0/0:27,0:10:21.07:0,21,282	./.	0/0:28,0:22:63.21:0,63,875	0/0:15,0:14:27.06:0,27,342	0/0:22,0:21:63.12:0,63,820	0/0:2,0:1:3.01:0,3,35	0/1:2,4:5:58.63:93,0,59	./.	0/0:1,0:1:3.01:0,3,35	0/0:2,0:2:3.01:0,3,34	./.	0/0:2,0:2:2.97:0,3,20	0/0:1,0:1:3.01:0,3,42	0/0:1,0:1:3.01:0,3,35	./.	0/0:35,0:26:78.25:0,78,1075	0/0:86,1:85:99:0,240,3352	0/0:11,0:11:33.11:0,33,462	1/1:1,1:2:3.01:36,3,0	1/1:0,2:1:3.01:36,3,0	./.	0/0:16,0:16:45.15:0,45,630	0/0:2,1:2:5.05:0,5,41	0/0:4,0:2:6.02:0,6,71	0/0:1,0:1:3.01:0,3,36
chr10	12109303	.	A	AT	312.11	PASS	AB=0.689;AC=16;AF=0.364;AN=44;BaseQRankSum=6.128;DP=324;FS=40.578;HRun=3;HaplotypeScore=41.9859;InbreedingCoeff=0.4738;MQ=54.46;MQ0=14;MQRankSum=-5.382;QD=12.48;ReadPosRankSum=-1.663;VQSLOD=-0.1958;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:66.20:0,66,789	./.	0/0:23,0:8:22.85:0,23,230	0/0:29,0:13:13.67:0,14,274	./.	0/0:26,2:22:23.02:0,23,679	0/0:12,0:11:24.06:0,24,277	0/0:26,1:26:26.22:0,26,698	1/1:0,2:1:3.01:40,3,0	0/1:5,2:6:42.13:64,0,42	./.	1/1:0,1:1:3.01:40,3,0	1/1:0,2:2:3.01:40,3,0	./.	1/1:0,2:2:3.01:40,3,0	0/0:1,0:1:2.98:0,3,22	1/1:0,1:1:3.01:40,3,0	./.	0/0:34,0:26:72.22:0,72,863	0/0:85,0:83:99:0,243,2902	0/0:12,0:12:36.11:0,36,431	0/0:1,0:1:2.96:0,3,19	0/0:2,0:1:2.96:0,3,19	./.	0/0:19,0:19:57.17:0,57,680	1/1:1,2:2:6.02:77,6,0	0/1:2,4:3:11.80:72,0,12	1/1:0,1:1:3.01:40,3,0
chr10	12109414	.	TTTTGGTTGGC	T	411.71	PASS	AC=6;AF=0.231;AN=26;BaseQRankSum=4.185;DP=298;FS=20.548;HRun=0;HaplotypeScore=186.6385;InbreedingCoeff=0.8597;MQ=57.68;MQ0=7;MQRankSum=-3.458;QD=68.62;ReadPosRankSum=0.735;VQSLOD=1.8397;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:99:0,99,5006	./.	0/0:25,0:15:42.11:0,42,1104	0/0:28,0:15:42.14:0,42,1216	./.	0/0:23,0:22:66.23:0,66,3512	0/0:13,0:13:39.13:0,39,1900	0/0:26,0:24:72.25:0,72,3385	./.	1/1:1,1:2:6.02:174,6,0	1/1:0,2:2:6.02:172,6,0	./.	./.	./.	./.	./.	./.	./.	0/0:38,0:38:99:0,111,5225	0/0:64,0:64:99:0,193,9604	0/0:23,0:23:69.24:0,69,3411	1/1:0,2:2:6.02:171,6,0	./.	./.	0/0:19,0:19:57.20:0,57,2790	./.	./.	./.
chr10	12109508	.	G	GA	53.82	PASS	AC=8;AF=0.235;AN=34;BaseQRankSum=7.485;DP=349;FS=59.270;HRun=0;HaplotypeScore=104.1312;InbreedingCoeff=0.7512;MQ=55.31;MQ0=4;MQRankSum=-7.088;QD=2.83;ReadPosRankSum=-0.647;VQSLOD=0.4240;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,114,1573	./.	0/0:25,0:17:51.14:0,51,639	0/0:20,0:16:45.13:0,45,588	1/1:0,4:4:10.76:45,11,0	0/0:29,0:26:78.19:0,78,1054	0/0:16,0:16:48.12:0,48,617	0/0:29,0:29:87.25:0,87,1150	./.	./.	1/1:1,4:5:7.71:31,8,0	0/0:1,0:1:2.92:0,3,17	./.	./.	0/0:1,0:1:2.99:0,3,24	./.	0/0:1,0:1:2.99:0,3,24	./.	0/0:39,0:39:99:0,111,1493	0/0:66,9:71:99:0,106,2527	0/0:36,0:36:99:0,108,1465	./.	1/1:1,8:7:16.85:87,17,0	./.	0/0:18,0:18:54.18:0,54,754	./.	./.	1/1:0,1:1:2.88:15,3,0
chr10	12109530	.	CTATT	C	280.08	PASS	AB=0.746;AC=8;AF=0.160;AN=50;BaseQRankSum=5.629;DP=355;FS=30.878;HRun=0;HaplotypeScore=89.4931;InbreedingCoeff=0.2817;MQ=48.73;MQ0=11;MQRankSum=-5.185;QD=3.04;ReadPosRankSum=1.387;VQSLOD=0.0572;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,129,3649	./.	0/0:22,0:11:33.11:0,33,889	0/0:17,0:7:21.07:0,21,587	1/1:2,1:3:3.01:33,3,0	0/0:30,0:27:81.23:0,81,2245	0/0:14,0:14:42.14:0,42,1215	0/0:21,0:21:63.21:0,63,1654	./.	0/0:4,0:4:12.04:0,12,344	1/1:1,1:2:3.01:60,3,0	0/0:1,0:1:3.01:0,3,84	0/0:1,0:1:3.01:0,3,84	0/0:3,0:3:9.03:0,9,204	0/0:2,0:2:6.02:0,6,122	./.	0/0:1,0:1:3.01:0,3,55	0/0:3,0:3:6.02:0,6,147	0/0:38,0:29:81.28:0,81,2309	0/1:71,8:74:82.24:82,0,5332	0/0:35,0:35:99:0,102,2781	0/0:2,0:2:3.01:0,3,84	0/1:2,5:6:99:164,0,105	0/0:1,0:1:2.97:0,3,20	0/0:19,0:19:57.17:0,57,1513	0/0:2,0:2:5.98:0,6,86	0/0:4,0:4:9.03:0,9,201	1/1:0,1:1:3.01:60,3,0
chr10	12109584	.	T	TC	1606.19	PASS	AB=0.950;AC=31;AF=0.596;AN=52;BaseQRankSum=11.893;DP=391;FS=12.073;HRun=3;HaplotypeScore=66.8329;InbreedingCoeff=0.5750;MQ=44.61;MQ0=9;MQRankSum=-9.355;QD=10.57;ReadPosRankSum=8.984;VQSLOD=-0.5166;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:34:78.21:0,78,919	./.	0/0:20,0:9:24.07:0,24,287	0/0:20,0:16:41.31:0,41,415	1/1:4,0:4:6.01:62,6,0	0/0:24,3:26:30.31:0,30,749	0/0:22,0:22:63.17:0,63,732	0/0:16,0:16:42.12:0,42,494	./.	1/1:6,0:6:18:158,18,0	0/1:6,0:5:1.75:65,0,2	1/1:6,0:5:15.03:145,15,0	1/1:4,0:3:9.01:86,9,0	1/1:3,0:3:9.02:87,9,0	1/1:4,0:4:2.78:80,3,0	0/1:2,0:2:4.14:22,0,4	0/1:2,0:2:2.34:24,0,2	1/1:7,0:5:11.99:100,12,0	0/1:33,6:38:99:111,0,873	0/0:69,4:70:12.70:0,13,1775	0/1:26,4:29:80.40:80,0,811	1/1:3,0:3:6.01:60,6,0	1/1:12,0:10:16.28:245,16,0	1/1:7,0:6:9.01:84,9,0	0/0:24,0:23:60.18:0,60,720	1/1:5,0:4:11.97:99,12,0	1/1:5,0:5:12.02:113,12,0	1/1:7,0:7:20.97:176,21,0
chr10	12109586	.	C	CT	2524.79	PASS	AB=0.647;AC=28;AF=0.538;AN=52;BaseQRankSum=11.613;DP=389;FS=15.163;HRun=0;HaplotypeScore=61.6066;InbreedingCoeff=0.6405;MQ=43.89;MQ0=16;MQRankSum=-8.598;QD=29.36;ReadPosRankSum=9.379;VQSLOD=2.0557;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:28:78.26:0,78,1087	./.	0/0:20,0:9:24.08:0,24,336	0/0:20,0:16:42.39:0,42,507	1/1:0,4:4:6.02:95,6,0	0/0:27,0:25:50.34:0,50,933	0/0:24,0:22:63.21:0,63,880	0/0:15,0:14:42.14:0,42,587	./.	1/1:1,6:6:18.06:287,18,0	0/1:2,4:5:22.26:86,0,22	1/1:0,6:5:15.05:239,15,0	1/1:1,3:3:9.03:143,9,0	1/1:0,3:3:9.03:143,9,0	1/1:1,3:4:2.27:134,2,0	0/1:1,1:2:4.67:42,0,5	0/1:2,1:2:2.86:42,0,3	1/1:1,6:5:12.04:192,12,0	0/0:38,0:37:28.97:0,29,1126	0/0:72,0:69:91.95:0,92,2250	0/0:31,0:30:5.30:0,5,967	1/1:0,3:3:6.02:95,6,0	0/1:3,9:10:3.33:355,0,3	1/1:3,5:7:9.03:144,9,0	0/0:24,0:23:63.20:0,63,859	1/1:1,4:4:12.04:192,12,0	1/1:0,5:5:12.04:191,12,0	1/1:0,7:7:21.07:335,21,0
chr10	12110137	.	TC	T	1112.63	PASS	AB=0.753;AC=29;AF=0.604;AN=48;BaseQRankSum=9.701;DP=333;FS=3.051;HRun=2;HaplotypeScore=34.0720;InbreedingCoeff=0.5284;MQ=45.94;MQ0=18;MQRankSum=-6.435;QD=9.59;ReadPosRankSum=3.234;VQSLOD=1.6384;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:48.16:0,48,711	0/1:1,2:2:32.86:33,0,39	0/0:14,0:6:15.05:0,15,223	0/0:20,0:7:18.06:0,18,248	1/1:0,12:7:18.02:215,18,0	0/0:18,4:21:9.42:0,9,635	0/0:9,3:10:24.08:0,24,359	0/1:26,7:27:99:123,0,738	1/1:0,6:6:6.02:78,6,0	./.	1/1:0,10:6:15.05:194,15,0	./.	1/1:1,2:2:3.01:39,3,0	1/1:1,1:2:3.01:39,3,0	1/1:0,3:3:3.01:39,3,0	1/1:0,2:2:3.01:39,3,0	1/1:0,4:3:9.03:117,9,0	1/1:0,3:3:6.02:78,6,0	0/0:32,4:23:63.21:0,63,944	0/0:53,11:57:75.75:0,76,2120	0/1:16,4:18:2.71:3,0,665	1/1:0,4:1:3.01:39,3,0	./.	1/1:0,3:3:5.95:57,6,0	0/0:19,0:18:51.16:0,51,744	./.	1/1:0,6:5:12.04:155,12,0	1/1:0,2:2:3.01:39,3,0
chr10	12110259	.	AG	A	399.28	PASS	AB=0.882;AC=17;AF=0.472;AN=36;BaseQRankSum=5.861;DP=303;FS=3.605;HRun=1;HaplotypeScore=46.3043;InbreedingCoeff=0.6520;MQ=60.90;MQ0=9;MQRankSum=-6.328;QD=7.13;ReadPosRankSum=-0.656;VQSLOD=0.4847;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:87.26:0,87,1258	./.	0/0:14,0:8:24.07:0,24,337	0/0:20,1:10:24.08:0,24,348	./.	0/0:34,3:37:42.66:0,43,1115	0/0:8,0:7:21.07:0,21,311	0/1:26,4:30:81.72:82,0,944	1/1:4,1:5:3.01:42,3,0	1/1:1,2:3:5.98:61,6,0	./.	./.	1/1:1,2:2:6.02:83,6,0	./.	./.	1/1:0,3:3:3.01:42,3,0	1/1:1,0:1:1.25:3,1,0	./.	0/0:33,2:28:84.27:0,84,1238	0/0:65,0:63:99:0,178,2594	0/0:19,0:19:57.17:0,57,813	1/1:0,3:2:6.02:83,6,0	./.	./.	0/0:14,0:14:42.14:0,42,628	1/1:2,1:2:5.98:62,6,0	1/1:0,5:5:6.02:83,6,0	./.
chr10	12110299	.	CA	C	3536.46	PASS	AB=0.727;AC=21;AF=0.618;AN=34;BaseQRankSum=6.425;DP=343;FS=12.426;HRun=7;HaplotypeScore=41.8486;InbreedingCoeff=0.6431;MQ=47.20;MQ0=26;MQRankSum=1.464;QD=19.22;ReadPosRankSum=1.708;VQSLOD=2.0049;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:30:84.26:0,84,1044	./.	0/0:20,0:8:24.08:0,24,299	0/0:22,0:9:21.02:0,21,259	./.	0/0:33,0:33:84.26:0,84,1045	0/0:16,0:15:36.12:0,36,452	0/1:15,9:12:86.11:146,0,86	1/1:3,4:4:3.01:30,3,0	1/1:0,4:4:9.02:92,9,0	./.	./.	1/1:0,2:1:3.01:31,3,0	1/1:2,4:3:3:31,3,0	./.	1/1:2,4:3:3.01:31,3,0	./.	./.	1/1:11,28:29:84.18:851,84,0	1/1:9,56:62:99:1499,147,0	1/1:1,25:26:72.16:735,72,0	./.	./.	./.	0/0:18,0:18:54.13:0,54,661	1/1:1,3:2:6.01:61,6,0	1/1:0,1:1:3.01:31,3,0	./.
chr10	12110525	.	A	AAT	70.27	PASS	AC=6;AF=0.231;AN=26;BaseQRankSum=3.228;DP=294;FS=9.075;HRun=0;HaplotypeScore=52.1328;InbreedingCoeff=0.7884;MQ=65.20;MQ0=6;MQRankSum=-3.170;QD=7.03;ReadPosRankSum=-2.219;VQSLOD=0.9947;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:69.23:0,69,1016	./.	0/0:19,0:17:51.17:0,51,741	0/0:19,0:18:51.17:0,51,738	./.	0/0:19,1:19:51.17:0,51,751	0/0:12,0:10:24.08:0,24,353	0/0:18,0:18:51.16:0,51,716	./.	1/1:0,2:2:5.99:77,6,0	1/1:1,4:3:3.01:37,3,0	./.	./.	./.	./.	./.	./.	./.	0/0:44,0:44:99:0,129,1834	0/0:57,4:57:99:0,153,2137	0/0:29,1:29:78.18:0,78,1100	./.	./.	./.	0/0:17,0:17:51.17:0,51,751	1/1:0,3:2:3.01:56,3,0	./.	./.
chr10	12110607	.	C	CAT	145.40	PASS	AC=8;AF=0.333;AN=24;BaseQRankSum=4.027;DP=289;FS=10.820;HRun=0;HaplotypeScore=47.7210;InbreedingCoeff=0.7223;MQ=46.64;MQ0=26;MQRankSum=-3.931;QD=14.54;ReadPosRankSum=-0.918;VQSLOD=1.9878;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:87.27:0,87,1114	./.	./.	./.	./.	0/0:16,0:11:21.07:0,21,273	0/0:8,0:5:12:0,12,133	0/0:33,0:13:36.12:0,36,468	1/1:2,2:2:6.02:97,6,0	./.	./.	./.	1/1:1,1:1:3.01:51,3,0	./.	1/1:0,2:2:3.01:51,3,0	1/1:0,2:1:3.01:51,3,0	./.	./.	0/0:36,1:24:9.25:0,9,691	0/0:63,0:62:99:0,159,2029	0/0:44,0:44:99:0,102,1295	./.	./.	./.	0/0:19,0:19:45.15:0,45,585	./.	./.	./.
chr10	12110759	.	G	GGACCCCC	771.46	PASS	AC=6;AF=0.231;AN=26;BaseQRankSum=4.446;DP=318;FS=13.452;HRun=0;HaplotypeScore=104.0011;InbreedingCoeff=0.8798;MQ=43.33;MQ0=63;MQRankSum=-3.521;QD=96.43;ReadPosRankSum=1.419;VQSLOD=4.6099;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:84.29:0,84,2283	./.	0/0:36,0:13:36.12:0,36,944	0/0:35,0:8:21.07:0,21,568	1/1:0,2:2:6.02:250,6,0	0/0:22,0:22:60.21:0,60,1584	0/0:13,0:11:27.09:0,27,755	0/0:24,0:14:39.13:0,39,1090	./.	1/1:0,3:3:9.03:377,9,0	./.	./.	./.	./.	./.	./.	./.	./.	0/0:39,0:24:72.23:0,72,1946	0/0:64,3:64:99:0,181,4777	0/0:24,0:23:66.23:0,66,1776	1/1:0,3:2:6.02:251,6,0	./.	./.	0/0:17,0:17:48.16:0,48,1311	./.	./.	./.
chr10	12111140	.	TC	T	395.43	PASS	AC=4;AF=0.200;AN=20;BaseQRankSum=4.745;DP=218;FS=0.000;HRun=1;HaplotypeScore=60.1101;InbreedingCoeff=0.9064;MQ=66.85;MQ0=1;MQRankSum=-0.206;QD=21.97;ReadPosRankSum=1.597;VQSLOD=3.6831;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:66.23:0,66,1054	./.	0/0:9,0:8:23.90:0,24,301	0/0:8,0:8:5.63:0,6,301	./.	1/1:2,11:12:27.09:343,27,0	1/1:1,4:4:12.04:152,12,0	0/0:30,0:29:81.26:0,81,1257	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	0/0:42,0:42:99:0,108,1690	0/0:54,0:54:99:0,157,2446	0/0:5,0:5:15.05:0,15,240	./.	./.	./.	0/0:18,0:18:54.17:0,54,840	./.	./.	./.
chr10	12111273	.	A	ACG	210.93	PASS	AB=0.960;AC=7;AF=0.184;AN=38;BaseQRankSum=3.777;DP=465;FS=0.000;HRun=0;HaplotypeScore=28.3656;InbreedingCoeff=0.1855;MQ=29.33;MQ0=117;MQRankSum=-2.921;QD=2.27;ReadPosRankSum=0.528;VQSLOD=1.0689;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:30:60.20:0,60,965	1/1:3,1:2:3.01:58,3,0	./.	./.	./.	0/0:26,0:15:36.12:0,36,587	0/0:19,0:15:36.12:0,36,577	0/0:32,0:13:36.12:0,36,574	0/0:12,0:2:3.01:0,3,49	0/0:14,0:5:3.01:0,3,49	./.	./.	0/0:9,0:2:3.01:0,3,49	./.	1/1:7,3:5:9.03:172,9,0	0/0:7,0:1:3.01:0,3,49	0/0:18,1:6:6.02:0,6,98	0/1:21,1:6:48.57:49,0,89	0/1:37,1:22:0.29:0,0,824	0/0:74,0:58:99:0,132,2100	0/1:18,1:10:39.33:39,0,213	0/0:10,0:4:6.02:0,6,88	./.	./.	0/0:24,0:22:33.11:0,33,538	0/0:10,0:4:3.01:0,3,49	0/0:13,0:2:3.01:0,3,49	./.
chr10	12111545	.	A	AC	2355.19	PASS	AB=0.790;AC=34;AF=0.680;AN=50;BaseQRankSum=6.013;DP=530;FS=88.476;HRun=0;HaplotypeScore=57.1451;InbreedingCoeff=0.2692;MQ=39.48;MQ0=64;MQRankSum=-8.926;QD=7.05;ReadPosRankSum=0.785;VQSLOD=-0.1806;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:32,6:33:52.47:52,0,916	./.	0/0:41,0:16:43.17:0,43,527	0/0:36,0:15:32.28:0,32,469	1/1:0,5:4:12.04:181,12,0	0/1:21,11:21:99:125,0,541	0/0:25,4:19:5.56:0,6,602	0/0:31,4:20:11.25:0,11,708	./.	1/1:5,7:5:12.04:183,12,0	1/1:1,5:3:9.03:136,9,0	1/1:3,10:4:12.04:182,12,0	1/1:1,14:10:12.04:182,12,0	1/1:0,6:3:9.03:136,9,0	1/1:1,10:4:12.04:182,12,0	1/1:1,5:4:9.03:137,9,0	0/1:5,8:7:23.62:210,0,24	./.	0/0:41,6:31:47.63:0,48,1190	0/1:66,10:71:67.89:68,0,2301	0/1:16,6:20:91.54:92,0,457	1/1:0,8:2:6.02:91,6,0	1/1:1,6:1:3.01:45,3,0	1/1:1,14:7:3.01:46,3,0	0/1:18,4:21:99:119,0,643	1/1:4,8:6:7.33:176,7,0	1/1:4,7:5:3.01:46,3,0	1/1:1,3:3:9.03:137,9,0
chr10	12118160	.	CAG	C	2696.15	PASS	AB=0.719;AC=6;AF=0.250;AN=24;BaseQRankSum=1.278;DP=474;FS=0.492;HRun=0;HaplotypeScore=156.4263;InbreedingCoeff=-0.3856;MQ=46.39;MQ0=152;MQRankSum=-1.954;QD=9.73;ReadPosRankSum=0.109;VQSLOD=3.3826;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:45:99:0,99,1762	./.	0/0:42,0:9:23.97:0,24,378	0/0:47,0:8:21.04:0,21,313	./.	0/1:25,12:28:99:234,0,626	0/1:16,12:23:99:316,0,368	0/1:21,21:25:99:679,0,305	./.	./.	./.	./.	./.	./.	./.	./.	0/0:2,0:1:3.01:0,3,55	./.	0/1:33,13:27:99:311,0,740	0/1:54,18:62:99:341,0,1761	0/1:19,33:48:99:914,0,707	./.	./.	./.	0/0:28,0:26:69.24:0,69,1260	./.	0/0:4,0:1:3.01:0,3,53	./.
chr10	12120777	.	TA	T	238.90	PASS	AB=0.833;AC=5;AF=0.250;AN=20;BaseQRankSum=3.262;DP=104;FS=0.000;HRun=9;HaplotypeScore=26.6610;InbreedingCoeff=0.6826;MQ=64.73;MQ0=11;MQRankSum=0.405;QD=13.27;ReadPosRankSum=-0.341;VQSLOD=1.7162;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:14:36.05:0,36,390	./.	0/0:12,0:7:21.01:0,21,218	0/0:3,0:3:6.48:0,6,62	./.	1/1:1,8:9:24.01:220,24,0	1/1:0,4:4:12.01:110,12,0	0/0:15,0:10:30.09:0,30,346	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	0/0:15,0:14:39.08:0,39,436	0/0:9,0:10:29.92:0,30,325	0/1:4,1:5:12.30:12,0,123	./.	./.	./.	0/0:11,0:10:30.05:0,30,331	./.	./.	./.
chr10	12121450	.	A	AAG	664.40	PASS	AC=4;AF=0.118;AN=34;BaseQRankSum=-1.725;DP=202;FS=3.756;HRun=0;HaplotypeScore=50.5160;InbreedingCoeff=0.4953;MQ=76.09;MQ0=0;MQRankSum=0.366;QD=30.20;ReadPosRankSum=1.625;VQSLOD=4.9099;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:75.21:0,75,1001	0/0:2,0:1:3.01:0,3,36	0/0:6,0:6:18.06:0,18,247	0/0:7,0:5:6.02:0,6,80	./.	1/1:2,10:12:9.20:401,9,0	1/1:0,10:10:21.07:366,21,0	0/0:21,0:21:60.17:0,60,783	./.	./.	0/0:2,0:2:2.92:0,3,17	0/0:1,0:1:3.01:0,3,36	0/0:1,0:1:2.96:0,3,19	./.	./.	./.	./.	./.	0/0:38,0:38:99:0,108,1416	0/0:36,0:36:96.27:0,96,1292	0/0:8,0:8:24.07:0,24,318	./.	0/0:1,0:1:2.92:0,3,17	./.	0/0:25,0:25:75.23:0,75,996	0/0:1,0:1:2.96:0,3,19	0/0:1,0:1:2.96:0,3,19	./.
chr10	12121650	.	A	ACT	4264.79	PASS	AB=0.831;AC=34;AF=0.708;AN=48;BaseQRankSum=9.859;DP=377;FS=39.325;HRun=0;HaplotypeScore=55.8451;InbreedingCoeff=0.2603;MQ=62.06;MQ0=1;MQRankSum=-9.289;QD=14.61;ReadPosRankSum=0.752;VQSLOD=2.8170;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,120,1920	./.	0/0:6,0:6:18.06:0,18,285	0/0:15,0:15:42.04:0,42,581	1/1:0,3:3:6.02:119,6,0	0/1:19,10:29:99:498,0,656	0/1:12,8:18:99:305,0,505	0/1:31,9:41:99:442,0,1250	1/1:0,8:7:21.07:418,21,0	1/1:1,4:4:9.03:173,9,0	1/1:0,3:3:6.02:120,6,0	1/1:0,6:7:15.05:299,15,0	1/1:0,6:5:12.04:239,12,0	1/1:0,13:7:18.06:358,18,0	1/1:0,6:6:15.05:298,15,0	./.	1/1:2,6:7:9.03:179,9,0	1/1:0,3:2:2.98:21,3,0	0/1:47,5:51:99:152,0,2004	0/1:42,6:47:99:103,0,1847	0/1:14,1:15:17.81:18,0,565	1/1:0,5:3:3.01:60,3,0	./.	1/1:0,5:3:9.03:180,9,0	0/0:15,0:15:45.15:0,45,734	1/1:0,6:3:9.03:164,9,0	1/1:0,7:6:5.90:120,6,0	./.
chr10	12121798	.	GT	G	1235.61	PASS	AB=0.653;AC=2;AF=0.036;AN=56;BaseQRankSum=2.776;DP=609;FS=1.941;HRun=3;HaplotypeScore=106.7933;InbreedingCoeff=-0.0476;MQ=60.59;MQ0=5;MQRankSum=-0.742;QD=15.64;ReadPosRankSum=-0.924;VQSLOD=2.9340;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:81.27:0,81,1212	0/0:8,0:7:11.98:0,12,98	0/0:24,0:24:47.17:0,47,775	0/0:26,0:25:5.51:0,6,712	0/0:15,0:15:38.94:0,39,333	0/1:16,23:39:99:706,0,548	0/1:21,19:40:99:619,0,820	0/0:42,0:38:90.66:0,91,1010	0/0:14,0:12:26.90:0,27,219	0/0:15,0:13:38.85:0,39,325	0/0:22,0:20:50.94:0,51,436	0/0:14,0:12:29.66:0,30,215	0/0:10,0:9:17.98:0,18,153	0/0:11,0:10:17.89:0,18,146	0/0:16,0:13:32.82:0,33,262	0/0:9,0:7:17.94:0,18,147	0/0:13,0:12:35.83:0,36,282	0/0:7,0:7:20.90:0,21,159	0/0:41,0:41:99:0,117,1492	0/0:80,0:79:99:0,217,2984	0/0:29,0:28:60.81:0,61,833	0/0:18,0:16:39:0,39,343	0/0:17,0:15:27:0,27,235	0/0:13,0:12:29.79:0,30,216	0/0:22,0:22:63.21:0,63,926	0/0:15,0:12:32.78:0,33,250	0/0:18,0:17:47.80:0,48,385	0/0:2,0:2:5.95:0,6,44
chr10	12122168	.	ACTTC	A	908.86	PASS	AB=0.806;AC=3;AF=0.054;AN=56;BaseQRankSum=7.779;DP=714;FS=2.566;HRun=0;HaplotypeScore=111.3985;InbreedingCoeff=-0.0798;MQ=45.15;MQ0=65;MQRankSum=-7.328;QD=6.36;ReadPosRankSum=-0.034;VQSLOD=2.5861;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:72.25:0,72,1891	0/0:13,0:9:12.04:0,12,311	0/0:17,0:8:21.07:0,21,525	0/0:23,0:20:57.18:0,57,1338	0/0:29,0:20:18.06:0,18,472	0/1:21,16:34:99:780,0,1320	0/1:19,5:20:7.01:7,0,1132	0/0:34,6:28:75.24:0,75,1887	0/0:26,0:15:21.07:0,21,551	0/0:19,0:14:30.10:0,30,776	0/0:18,0:16:18.06:0,18,468	0/0:17,0:14:15.05:0,15,383	0/0:19,0:14:27.09:0,27,712	0/0:15,0:9:12.04:0,12,317	0/0:30,0:21:36.12:0,36,949	0/0:23,0:21:33.11:0,33,828	0/0:21,0:14:9.03:0,9,238	0/0:6,0:2:3.01:0,3,79	0/0:48,3:42:73.65:0,74,2889	0/1:72,10:79:99:215,0,5047	0/0:31,2:31:35.18:0,35,2155	0/0:17,0:8:15.05:0,15,395	0/0:20,0:13:9.03:0,9,237	0/0:25,0:17:2.97:0,3,20	0/0:19,0:19:48.16:0,48,1265	0/0:26,0:18:45.12:0,45,1118	0/0:33,0:24:39.61:0,40,1012	0/0:3,0:2:3.01:0,3,79
chr10	12125035	.	T	TTA	3168.41	PASS	AC=8;AF=0.500;AN=16;BaseQRankSum=-9.045;DP=195;FS=6.035;HRun=0;HaplotypeScore=92.3181;MQ=93.90;MQ0=8;MQRankSum=-2.798;QD=34.82;ReadPosRankSum=1.778;VQSLOD=5.9046;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:79.74:0,80,1097	./.	0/0:29,0:27:47.95:0,48,981	0/0:29,0:28:67.44:0,67,890	./.	./.	./.	1/1:2,24:22:57.15:970,57,0	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	1/1:0,11:10:30.10:530,30,0	1/1:4,39:34:84.22:1550,84,0	1/1:1,7:10:12.04:228,12,0	./.	./.	./.	0/0:18,0:18:51.17:0,51,752	./.	./.	./.
chr10	12126585	.	GT	G	1444.94	PASS	AB=0.706;AC=10;AF=0.625;AN=16;BaseQRankSum=2.642;DP=254;FS=1.463;HRun=9;HaplotypeScore=70.0938;MQ=48.42;MQ0=82;MQRankSum=-0.817;QD=7.19;ReadPosRankSum=1.060;VQSLOD=1.2959;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:26,17:36:99:108,0,628	./.	0/0:19,6:12:33.09:0,33,368	0/0:14,2:11:29.71:0,30,309	./.	./.	./.	1/1:8,21:6:15.01:137,15,0	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	1/1:2,17:10:30.02:275,30,0	1/1:6,64:50:96.02:878,96,0	1/1:2,6:7:2.79:27,3,0	./.	./.	./.	0/1:18,14:28:99:120,0,516	./.	./.	./.
chr10	12130629	.	GT	G	507.59	PASS	AB=0.703;AC=2;AF=0.100;AN=20;BaseQRankSum=5.561;DP=471;FS=0.782;HRun=6;HaplotypeScore=83.5811;InbreedingCoeff=-0.1111;MQ=58.59;MQ0=0;MQRankSum=2.694;QD=6.68;ReadPosRankSum=1.670;VQSLOD=0.0068;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:67,0:67:99:0,190,2438	./.	0/0:24,0:17:45.13:0,45,545	0/0:32,0:24:60.17:0,60,735	./.	0/1:24,16:40:99:255,0,726	0/1:20,16:34:99:332,0,531	0/0:56,0:55:99:0,159,2001	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	0/0:55,0:53:99:0,153,1979	0/0:82,0:82:99:0,229,2969	0/0:37,0:37:99:0,108,1377	./.	./.	./.	0/0:36,0:36:99:0,102,1322	./.	./.	./.
chr10	12131832	.	TG	T	682.01	PASS	AB=0.701;AC=2;AF=0.100;AN=20;BaseQRankSum=0.184;DP=352;FS=9.226;HRun=1;HaplotypeScore=266.8665;InbreedingCoeff=-0.1112;MQ=43.68;MQ0=5;MQRankSum=-2.630;QD=13.92;ReadPosRankSum=-1.457;VQSLOD=1.6980;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:95.27:0,95,1416	./.	0/0:22,0:12:30.06:0,30,442	0/0:29,1:17:29.71:0,30,691	./.	0/1:17,13:29:99:508,0,555	0/1:11,8:18:99:254,0,246	0/0:44,0:38:99:0,114,1774	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	0/0:38,0:32:96.31:0,96,1497	0/0:81,0:76:99:0,196,3026	0/0:20,0:20:39.13:0,39,620	./.	./.	./.	0/0:34,0:34:87.29:0,87,1363	./.	./.	./.
chr10	12131844	.	T	TC	8872.13	PASS	AB=0.697;AC=14;AF=0.700;AN=20;BaseQRankSum=9.818;DP=321;FS=2.512;HRun=0;HaplotypeScore=185.7055;InbreedingCoeff=0.5191;MQ=47.93;MQ0=0;MQRankSum=-2.595;QD=32.62;ReadPosRankSum=1.827;VQSLOD=4.4254;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:21,12:33:99:295,0,706	./.	0/0:22,0:15:42.09:0,42,526	0/0:26,1:18:17.89:0,18,470	./.	1/1:0,26:25:69.13:1054,69,0	1/1:2,17:18:30.10:455,30,0	1/1:3,26:23:66.18:1023,66,0	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	1/1:1,31:29:84.24:1313,84,0	1/1:0,80:75:99:3429,217,0	1/1:1,19:20:45.08:675,45,0	./.	./.	./.	0/1:16,17:33:99:627,0,538	./.	./.	./.
chr10	12131997	.	T	TATTCCAG	14247.83	PASS	AB=0.844;AC=14;AF=0.700;AN=20;BaseQRankSum=-7.090;DP=315;FS=6.177;HRun=0;HaplotypeScore=159.2929;InbreedingCoeff=0.4578;MQ=68.76;MQ0=5;MQRankSum=-10.761;QD=54.17;ReadPosRankSum=0.849;VQSLOD=4.1270;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:28,4:31:99:672,0,1417	./.	0/0:31,0:18:48.16:0,48,1067	0/0:21,0:17:34.36:0,34,710	./.	1/1:10,17:29:51.18:1904,51,0	1/1:5,7:12:18.06:664,18,0	1/1:19,14:32:90.27:3211,90,0	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	1/1:12,12:19:36.12:1245,36,0	1/1:15,55:64:99:5032,129,0	1/1:5,1:7:3.01:118,3,0	./.	./.	./.	0/1:33,10:43:99:1401,0,1803	./.	./.	./.
chr10	12132305	.	T	TA	12866.72	PASS	AB=0.742;AC=16;AF=0.800;AN=20;BaseQRankSum=-9.078;DP=423;FS=5.426;HRun=0;HaplotypeScore=91.7375;InbreedingCoeff=-0.2500;MQ=57.13;MQ0=9;MQRankSum=-1.806;QD=30.49;ReadPosRankSum=1.461;VQSLOD=4.4850;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:30,21:51:99:777,0,1029	./.	0/1:20,5:18:99:187,0,409	0/1:24,10:29:99:398,0,632	./.	1/1:0,44:43:99:1934,123,0	1/1:0,30:30:78.27:1242,78,0	1/1:3,44:40:99:1721,114,0	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	1/1:2,41:33:93.32:1478,93,0	1/1:3,79:78:99:3021,201,0	1/1:0,31:31:90.31:1437,90,0	./.	./.	./.	0/1:16,18:34:99:672,0,519	./.	./.	./.
chr10	12132469	.	TTCCAATTTGTA	T	6731.89	PASS	AB=0.765;AC=9;AF=0.450;AN=20;BaseQRankSum=10.711;DP=358;FS=21.248;HRun=0;HaplotypeScore=192.0520;InbreedingCoeff=-0.8749;MQ=42.82;MQ0=58;MQRankSum=-10.638;QD=19.98;ReadPosRankSum=-1.213;VQSLOD=2.1441;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:32,6:37:99:483,0,4030	0/0:1,0:1:3.01:0,3,172	./.	0/1:24,5:3:33.73:34,0,41	./.	0/1:27,24:46:99:1277,0,3178	0/1:10,11:12:99:502,0,546	0/1:35,5:13:99:147,0,252	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	0/1:18,8:17:99:634,0,1631	0/1:37,33:64:99:2495,0,4188	0/1:22,13:32:99:597,0,3046	./.	./.	./.	0/1:19,8:26:99:563,0,2999	./.	./.	./.
chr10	12133720	.	ATTCT	A	4593.64	PASS	AB=0.761;AC=8;AF=0.400;AN=20;BaseQRankSum=10.466;DP=443;FS=1.991;HRun=0;HaplotypeScore=194.1782;InbreedingCoeff=0.1667;MQ=54.58;MQ0=3;MQRankSum=-0.438;QD=15.62;ReadPosRankSum=2.013;VQSLOD=4.7814;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:59:99:0,156,3616	./.	0/0:27,0:22:51.02:0,51,1149	0/0:24,0:21:54.04:0,54,1138	./.	1/1:5,38:42:96.33:1746,96,0	1/1:0,25:25:51.17:924,51,0	0/1:28,14:37:99:354,0,1254	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	0/1:49,18:64:99:541,0,2463	0/1:67,28:93:99:827,0,3722	0/1:14,8:22:99:203,0,774	./.	./.	./.	0/0:39,0:39:99:0,108,2788	./.	./.	./.
chr10	12134094	.	C	CCTA	7228.69	PASS	AB=0.762;AC=14;AF=0.700;AN=20;BaseQRankSum=3.913;DP=394;FS=4.719;HRun=0;HaplotypeScore=124.7662;InbreedingCoeff=0.4820;MQ=40.48;MQ0=22;MQRankSum=-8.216;QD=22.88;ReadPosRankSum=-2.899;VQSLOD=3.9670;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:36,8:41:70.14:70,0,1123	./.	0/0:28,0:12:21.07:0,21,341	0/0:39,0:15:29.25:0,29,415	./.	1/1:6,34:31:27.09:531,27,0	1/1:6,13:17:30.10:632,30,0	1/1:6,14:13:24.05:496,24,0	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	1/1:4,23:26:65.64:1235,66,0	1/1:14,100:115:99:3645,171,0	1/1:1,6:7:6.02:136,6,0	./.	./.	./.	0/1:22,20:41:99:483,0,767	./.	./.	./.
chr10	12134598	.	CTTGTTTTTTTTTTTTTTTTTT	C	4620.09	PASS	AB=0.882;AC=8;AF=0.364;AN=22;BaseQRankSum=9.891;DP=379;FS=2.960;HRun=0;HaplotypeScore=398.7860;InbreedingCoeff=-0.6437;MQ=50.18;MQ0=37;MQRankSum=0.576;QD=15.40;ReadPosRankSum=2.487;VQSLOD=2.2136;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:32,0:30:99:273,0,2105	./.	0/1:32,0:11:38.01:38,0,239	0/0:31,0:11:1.65:0,2,194	./.	0/1:24,0:26:99:213,0,2580	0/1:20,0:19:77.36:77,0,1183	0/1:36,0:31:49.29:49,0,2330	./.	./.	./.	./.	./.	./.	./.	./.	0/0:5,0:2:6.02:0,6,315	./.	0/1:29,32:53:99:1453,0,2200	0/1:23,39:64:99:2087,0,1636	0/1:22,1:24:99:429,0,712	./.	./.	./.	0/0:23,0:21:20.23:0,20,1631	./.	./.	./.
chr10	12135329	.	TG	T	3563.88	PASS	AC=16;AF=0.800;AN=20;BaseQRankSum=-4.069;DP=216;FS=27.043;HRun=3;HaplotypeScore=44.4929;InbreedingCoeff=0.8713;MQ=39.50;MQ0=16;MQRankSum=-3.230;QD=19.69;ReadPosRankSum=1.685;VQSLOD=1.9354;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,27:29:34.79:485,35,0	./.	0/0:14,0:2:6.01:0,6,60	0/0:15,0:4:12.02:0,12,126	./.	1/1:2,23:21:42.09:500,42,0	1/1:1,15:14:33.06:388,33,0	1/1:3,28:25:75.19:895,75,0	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	1/1:6,22:22:48.11:557,48,0	1/1:6,26:24:44.79:460,45,0	1/1:1,4:4:8.99:94,9,0	./.	./.	./.	1/1:1,13:11:15.05:185,15,0	./.	./.	./.
chr10	12135783	.	GTTT	G	3455.17	PASS	AB=0.680;AC=6;AF=0.333;AN=18;BaseQRankSum=-2.021;DP=443;FS=1.070;HRun=11;HaplotypeScore=127.8823;MQ=43.52;MQ0=32;MQRankSum=-2.672;QD=10.76;ReadPosRankSum=3.244;VQSLOD=0.7890;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:50,42:94:99:1075,0,2074	./.	0/0:9,2:3:2.96:0,3,19	./.	./.	0/0:4,0:34:32.90:0,33,91	0/0:7,0:30:22.90:0,23,63	0/1:27,16:27:99:278,0,471	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	0/1:21,19:37:99:564,0,583	0/1:13,41:56:99:946,0,430	0/1:14,23:41:99:325,0,476	./.	./.	./.	0/1:12,13:24:99:267,0,379	./.	./.	./.
chr10	12136150	.	GTGC	G	319.51	PASS	AB=0.875;AC=13;AF=0.342;AN=38;BaseQRankSum=5.347;DP=518;FS=27.088;HRun=0;HaplotypeScore=130.0184;InbreedingCoeff=0.5945;MQ=55.88;MQ0=13;MQRankSum=-4.974;QD=5.24;ReadPosRankSum=0.862;VQSLOD=1.1380;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:90,0:90:99:0,265,6415	./.	0/0:31,0:13:38.92:0,39,830	0/0:25,0:12:35.15:0,35,758	./.	0/1:36,6:42:0.18:0,0,2414	0/0:38,1:38:99:0,108,2633	0/0:38,0:35:99:0,102,2480	./.	0/0:2,0:2:3.01:0,3,74	./.	1/1:0,6:6:9.03:167,9,0	1/1:0,3:3:3.01:56,3,0	1/1:0,1:1:3.01:56,3,0	1/1:1,3:3:3.01:56,3,0	./.	1/1:0,2:2:3.01:56,3,0	./.	0/0:59,0:44:99:0,126,2968	0/0:60,0:60:99:0,178,4330	0/0:70,0:69:99:0,205,4815	1/1:2,1:1:3.01:56,3,0	0/0:1,0:1:3.01:0,3,72	./.	0/0:36,0:36:93.30:0,93,2232	0/0:1,0:1:3.01:0,3,74	./.	./.
chr10	12136452	.	AT	A	518.04	PASS	AC=26;AF=0.591;AN=44;BaseQRankSum=8.658;DP=554;FS=69.791;HRun=4;HaplotypeScore=65.1782;InbreedingCoeff=0.6692;MQ=46.85;MQ0=61;MQRankSum=-7.948;QD=13.28;ReadPosRankSum=2.223;VQSLOD=-0.5045;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:104,6:106:99:0,217,3808	./.	./.	0/0:29,1:2:6.01:0,6,68	1/1:0,3:3:3.01:36,3,0	0/0:31,5:34:51.42:0,51,1138	0/0:38,1:37:84.27:0,84,1159	0/0:42,1:22:51.13:0,51,676	1/1:0,3:3:3.01:36,3,0	1/1:1,3:3:6.02:72,6,0	./.	1/1:0,5:5:3.01:36,3,0	./.	1/1:0,4:3:5.95:54,6,0	1/1:0,5:4:5.95:54,6,0	1/1:0,1:1:3.01:36,3,0	1/1:0,3:2:6.02:72,6,0	1/1:0,2:2:6.02:72,6,0	0/0:69,2:47:99:0,103,1811	0/0:60,1:59:99:0,127,2110	0/0:64,5:67:99:0,148,2466	1/1:0,2:1:3.01:36,3,0	1/1:0,3:2:6.02:72,6,0	./.	0/0:31,3:33:15.49:0,15,1039	1/1:0,3:2:6.02:72,6,0	1/1:0,1:1:3.01:36,3,0	./.
chr10	12136491	.	C	CT	106.91	PASS	AC=8;AF=0.286;AN=28;BaseQRankSum=3.834;DP=542;FS=12.123;HRun=2;HaplotypeScore=83.3194;InbreedingCoeff=0.7662;MQ=55.06;MQ0=12;MQRankSum=-3.282;QD=5.35;ReadPosRankSum=1.362;VQSLOD=-0.5758;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:98,0:97:99:0,259,3148	./.	0/0:38,0:17:48.14:0,48,581	0/0:40,0:10:23.98:0,24,266	./.	0/0:35,2:35:90.28:0,90,1115	0/0:33,0:32:84.26:0,84,1041	0/0:37,0:34:93.28:0,93,1143	1/1:0,5:5:6.02:86,6,0	./.	./.	1/1:0,5:5:3.01:43,3,0	./.	1/1:2,4:5:3.01:43,3,0	1/1:2,2:3:3.01:43,3,0	./.	./.	./.	0/0:56,0:46:99:0,129,1596	0/0:70,0:68:99:0,187,2268	0/0:65,0:63:99:0,187,2274	./.	./.	./.	0/0:35,0:35:96.30:0,96,1190	./.	./.	./.
chr10	12137112	.	A	AT	5190.25	PASS	AB=0.724;AC=7;AF=0.350;AN=20;BaseQRankSum=13.533;DP=494;FS=0.000;HRun=5;HaplotypeScore=169.1901;InbreedingCoeff=-0.5389;MQ=55.60;MQ0=10;MQRankSum=1.252;QD=13.11;ReadPosRankSum=1.598;VQSLOD=2.8078;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:36,23:58:99:749,0,748	./.	0/0:25,4:11:23.99:0,24,230	0/1:22,5:16:67.55:68,0,292	./.	0/0:41,0:41:99:0,108,1141	0/0:25,0:25:66.16:0,66,707	0/1:36,20:56:99:648,0,574	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	0/1:36,32:65:99:992,0,698	0/1:41,57:98:99:1788,0,833	0/1:28,14:42:99:356,0,753	./.	./.	./.	0/1:23,19:42:99:589,0,588	./.	./.	./.
chr10	12137414	.	C	CT	1010.12	PASS	AB=0.797;AC=3;AF=0.150;AN=20;BaseQRankSum=-0.404;DP=470;FS=5.609;HRun=9;HaplotypeScore=161.8497;InbreedingCoeff=-0.1752;MQ=62.18;MQ0=5;MQRankSum=2.667;QD=6.92;ReadPosRankSum=1.400;VQSLOD=0.4920;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:57,32:90:99:856,0,948	./.	0/0:29,0:13:26.01:0,26,176	0/1:24,1:17:16.65:17,0,176	./.	0/0:38,0:38:86.97:0,87,755	0/0:19,0:17:32.98:0,33,286	0/0:61,0:57:99:0,128,1094	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	0/0:57,0:51:99:0,110,931	0/0:87,0:87:99:0,215,1909	0/0:27,0:27:68.96:0,69,595	./.	./.	./.	0/1:17,13:30:99:224,0,342	./.	./.	./.
chr10	12137433	.	TC	T	1599.69	PASS	AB=0.994;AC=10;AF=0.500;AN=20;BaseQRankSum=0.476;DP=419;FS=0.423;HRun=1;HaplotypeScore=155.7056;InbreedingCoeff=-0.1684;MQ=58.02;MQ0=11;MQRankSum=0.881;QD=5.54;ReadPosRankSum=-2.999;VQSLOD=-0.7553;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:93,0:93:99:0,170,2341	./.	0/1:21,0:6:17.20:17,0,97	0/1:16,0:8:7.81:8,0,140	./.	1/1:15,21:36:63.23:710,63,0	1/1:8,7:12:29.66:313,30,0	0/1:49,0:45:99:156,0,126	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	0/1:42,1:37:96.78:109,0,97	0/1:79,1:80:99:320,0,235	0/1:28,0:28:53.82:70,0,54	./.	./.	./.	0/0:34,0:34:49.57:0,50,771	./.	./.	./.
chr10	12137441	.	CT	C	1059.15	PASS	AB=0.796;AC=6;AF=0.300;AN=20;BaseQRankSum=1.777;DP=394;FS=2.589;HRun=8;HaplotypeScore=146.9079;InbreedingCoeff=-0.4851;MQ=58.30;MQ0=12;MQRankSum=-1.486;QD=4.45;ReadPosRankSum=-0.095;VQSLOD=0.0716;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:90,0:89:99:0,241,2784	./.	0/0:16,0:5:6.02:0,6,69	0/0:14,0:7:3.01:0,3,36	./.	0/1:22,12:34:99:266,0,369	0/1:12,4:13:59.85:60,0,140	0/1:30,8:32:99:168,0,371	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	0/1:41,7:39:99:209,0,619	0/1:58,16:74:99:286,0,1268	0/1:17,11:28:99:163,0,458	./.	./.	./.	0/0:32,0:32:63.16:0,63,752	./.	./.	./.
chr10	12137520	.	A	AC	150.31	PASS	AB=0.903;AC=7;AF=0.269;AN=26;BaseQRankSum=5.567;DP=498;FS=7.635;HRun=3;HaplotypeScore=97.0720;InbreedingCoeff=0.5925;MQ=57.22;MQ0=6;MQRankSum=-5.898;QD=2.51;ReadPosRankSum=-0.356;VQSLOD=-0.6979;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:84,1:84:99:0,202,2796	./.	0/0:22,0:18:54.01:0,54,602	0/0:33,0:21:61.02:0,61,631	1/1:1,0:1:3.01:32,3,0	0/0:53,1:54:99:0,106,1681	0/0:36,0:36:90.25:0,90,1059	0/0:53,1:49:99:0,138,1646	./.	1/1:0,2:2:6.02:84,6,0	./.	./.	./.	1/1:0,1:1:3.01:42,3,0	./.	./.	./.	./.	0/1:50,6:51:97.70:98,0,1440	0/0:70,0:70:99:0,187,2230	0/0:56,0:56:99:0,147,1718	./.	./.	./.	0/0:24,1:25:12.41:0,12,570	./.	./.	./.
chr10	12165812	.	G	GA	1330.56	PASS	AB=0.772;AC=7;AF=0.438;AN=16;BaseQRankSum=4.463;DP=339;FS=0.000;HRun=6;HaplotypeScore=93.8772;MQ=22.68;MQ0=171;MQRankSum=-1.800;QD=5.84;ReadPosRankSum=0.362;VQSLOD=-0.2273;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:11:18.04:0,18,182	./.	./.	./.	./.	1/1:3,24:14:27.09:335,27,0	1/1:3,20:14:30.10:377,30,0	0/1:34,11:24:99:158,0,422	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	0/1:30,19:22:99:276,0,303	0/1:62,22:59:99:283,0,1143	0/0:18,8:7:6.01:0,6,61	./.	./.	./.	0/0:25,0:14:24.05:0,24,244	./.	./.	./.
chr10	12169002	.	ACTCTGTCTCTGT	A	5204.58	PASS	AB=0.757;AC=6;AF=0.300;AN=20;BaseQRankSum=11.836;DP=617;FS=13.028;HRun=0;HaplotypeScore=549.0589;InbreedingCoeff=-0.4256;MQ=74.79;MQ0=2;MQRankSum=-7.125;QD=15.92;ReadPosRankSum=1.957;VQSLOD=0.4371;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:75,0:75:99:0,185,9659	./.	0/0:75,0:44:90.90:0,91,3419	0/0:95,0:56:87.83:0,88,3606	./.	0/1:30,28:58:99:1713,0,3709	0/1:20,12:31:99:580,0,1364	0/1:33,16:49:99:862,0,2284	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	0/1:42,17:57:99:953,0,4907	0/1:65,15:80:99:1081,0,7855	0/1:34,15:48:15.25:15,0,4447	./.	./.	./.	0/0:45,0:45:99:0,114,5649	./.	./.	./.
chr10	12170012	.	G	GAA	1582.09	PASS	AB=0.774;AC=6;AF=0.300;AN=20;BaseQRankSum=0.122;DP=333;FS=2.004;HRun=7;HaplotypeScore=131.4014;InbreedingCoeff=-0.4290;MQ=66.69;MQ0=9;MQRankSum=-1.732;QD=7.57;ReadPosRankSum=0.823;VQSLOD=-0.0641;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,141,1755	./.	0/0:13,0:11:24.02:0,24,255	0/0:16,0:15:39.11:0,39,453	./.	0/1:18,11:27:99:417,0,438	0/1:11,8:15:99:200,0,270	0/1:23,3:23:37.47:37,0,455	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	0/1:28,5:33:99:155,0,720	0/1:68,17:84:99:562,0,1730	0/1:7,7:15:99:306,0,171	./.	./.	./.	0/0:39,0:39:99:0,111,1272	./.	./.	./.
chr10	12170207	.	CAAAACA	C	4225.39	PASS	AB=0.931;AC=11;AF=0.550;AN=20;BaseQRankSum=-2.669;DP=426;FS=5.626;HRun=0;HaplotypeScore=230.7232;InbreedingCoeff=-0.8199;MQ=60.13;MQ0=9;MQRankSum=-4.730;QD=9.92;ReadPosRankSum=-5.420;VQSLOD=2.4606;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:40,24:63:99:169,0,2003	./.	0/1:27,0:18:99:183,0,370	0/1:35,0:26:99:266,0,420	./.	0/1:38,0:36:99:771,0,345	0/1:33,0:30:99:540,0,185	1/1:35,0:20:19.71:460,20,0	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	0/1:44,0:32:99:261,0,662	0/1:72,0:64:99:1060,0,781	0/1:29,0:28:99:373,0,463	./.	./.	./.	0/1:23,26:48:99:142,0,1370	./.	./.	./.
chr10	12170212	.	CA	C	6615.32	PASS	AB=0.829;AC=15;AF=0.750;AN=20;BaseQRankSum=4.175;DP=438;FS=3.669;HRun=5;HaplotypeScore=130.0997;InbreedingCoeff=0.1992;MQ=62.37;MQ0=5;MQRankSum=-2.903;QD=16.96;ReadPosRankSum=2.553;VQSLOD=3.6457;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:62,3:64:59.40:59,0,1047	./.	0/1:20,10:21:99:174,0,475	0/1:27,11:29:99:263,0,445	./.	1/1:8,28:34:98.10:999,98,0	1/1:3,31:31:71.88:794,72,0	1/1:2,36:24:60.17:677,60,0	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	1/1:11,34:35:86.90:949,87,0	1/1:9,60:62:99:1866,168,0	1/1:1,33:33:75.16:834,75,0	./.	./.	./.	0/0:48,0:47:26.45:0,26,748	./.	./.	./.
chr10	12171836	.	A	AT	1084.05	PASS	AB=0.923;AC=6;AF=0.300;AN=20;BaseQRankSum=12.479;DP=625;FS=2.855;HRun=0;HaplotypeScore=194.1260;InbreedingCoeff=-0.4445;MQ=46.26;MQ0=72;MQRankSum=-5.986;QD=2.72;ReadPosRankSum=-2.267;VQSLOD=2.8939;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:109,0:108:99:0,307,4212	./.	./.	0/0:35,0:1:0.89:0,1,2	./.	0/1:41,21:53:99:498,0,1242	0/1:41,13:50:99:295,0,759	0/1:65,0:49:99:120,0,1316	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	0/1:62,0:48:38.58:39,0,1360	0/1:77,0:70:99:124,0,1783	0/1:77,0:72:99:99,0,1822	./.	./.	0/0:1,0:1:3.01:0,3,42	0/0:44,0:43:99:0,123,1699	./.	./.	./.
chr10	12173231	.	T	TA	1962.43	PASS	AB=0.719;AC=6;AF=0.273;AN=22;BaseQRankSum=10.193;DP=521;FS=15.757;HRun=9;HaplotypeScore=161.7534;InbreedingCoeff=-0.4038;MQ=74.24;MQ0=1;MQRankSum=-0.660;QD=6.52;ReadPosRankSum=-2.619;VQSLOD=-0.3040;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:79,0:81:99:0,222,1886	0/0:2,0:1:3:0,3,26	0/0:44,1:39:35.96:0,36,529	0/0:37,0:37:50.47:0,50,465	./.	0/1:18,1:39:99:165,0,241	0/1:14,2:28:99:119,0,172	0/1:29,25:54:99:654,0,337	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	0/1:39,21:59:99:522,0,498	0/1:68,21:88:99:470,0,1152	0/1:20,9:29:99:129,0,345	./.	./.	./.	0/0:50,0:50:99:0,132,1130	./.	./.	./.
chr10	12173642	.	AAGAGT	A	734.45	PASS	AB=0.764;AC=2;AF=0.100;AN=20;BaseQRankSum=7.630;DP=543;FS=0.783;HRun=0;HaplotypeScore=272.9838;InbreedingCoeff=-0.1111;MQ=81.61;MQ0=10;MQRankSum=-6.059;QD=9.30;ReadPosRankSum=0.543;VQSLOD=2.4109;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:69,0:69:99:0,205,6404	./.	0/0:50,0:37:99:0,105,3242	0/0:45,0:32:80.74:0,81,2348	./.	0/1:26,9:34:99:295,0,2323	0/1:28,16:40:99:520,0,2410	0/0:76,0:76:99:0,229,7132	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	0/0:53,0:52:99:0,151,4851	0/0:63,0:62:99:0,184,5698	0/0:71,0:71:99:0,214,6725	./.	./.	./.	0/0:34,0:34:99:0,102,3160	./.	./.	./.
chr10	12173648	.	CAGAG	C	420.10	PASS	AB=0.760;AC=2;AF=0.100;AN=20;BaseQRankSum=7.205;DP=544;FS=0.909;HRun=0;HaplotypeScore=248.7132;InbreedingCoeff=-0.1111;MQ=89.01;MQ0=8;MQRankSum=-6.803;QD=5.46;ReadPosRankSum=2.521;VQSLOD=2.5334;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:64,0:64:99:0,190,5165	./.	0/0:50,0:38:99:0,108,2775	0/0:48,0:37:99:0,99,2357	./.	0/1:26,9:34:99:188,0,2081	0/1:26,16:38:99:312,0,2011	0/0:76,0:76:99:0,226,6121	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	0/0:60,0:59:99:0,165,4301	0/0:66,0:65:99:0,187,5156	0/0:67,0:67:99:0,202,5403	./.	./.	./.	0/0:33,0:33:99:0,99,2730	./.	./.	./.
chr10	12173859	.	C	CCA	1366.37	PASS	AB=0.663;AC=2;AF=0.091;AN=22;BaseQRankSum=-7.300;DP=532;FS=0.693;HRun=0;HaplotypeScore=131.7094;InbreedingCoeff=-0.1188;MQ=59.13;MQ0=7;MQRankSum=1.508;QD=15.18;ReadPosRankSum=1.876;VQSLOD=3.5560;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:50:99:0,126,1626	./.	0/0:51,0:10:24.06:0,24,286	0/0:39,0:14:31.40:0,31,394	./.	0/1:29,23:52:99:802,0,748	0/1:16,21:37:99:645,0,358	0/0:53,0:51:99:0,123,1551	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	0/0:65,0:61:99:0,150,1887	0/0:84,0:84:99:0,223,2858	0/0:53,0:52:99:0,105,1360	./.	./.	./.	0/0:44,0:44:99:0,117,1537	0/0:1,0:1:3.01:0,3,39	./.	./.
chr10	12174120	.	A	AACAC	627.63	PASS	AB=1.000;AC=19;AF=0.731;AN=26;BaseQRankSum=0.733;DP=459;FS=1.595;HRun=0;HaplotypeScore=170.4167;InbreedingCoeff=0.0201;MQ=54.01;MQ0=28;MQRankSum=0.796;QD=1.75;ReadPosRankSum=-1.046;VQSLOD=2.7679;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:50,2:51:9.18:233,9,0	./.	./.	./.	./.	1/1:30,4:31:8.80:150,9,0	1/1:35,3:35:2.62:70,3,0	1/1:44,0:43:3.48:37,3,0	./.	./.	0/0:1,0:1:2.98:0,3,21	./.	./.	./.	./.	./.	1/1:1,0:1:2.92:17,3,0	./.	0/1:40,0:40:43.21:43,0,67	1/1:37,0:39:8.30:61,8,0	0/1:69,0:68:18.88:19,0,39	./.	./.	0/0:2,0:1:2.98:0,3,21	0/1:24,0:24:55.26:55,0,121	1/1:1,0:1:2.74:12,3,0	1/1:1,0:2:5.83:33,6,0	./.
chr10	12175557	.	CA	C	422.75	PASS	AC=4;AF=0.167;AN=24;BaseQRankSum=5.475;DP=334;FS=7.887;HRun=8;HaplotypeScore=66.2573;InbreedingCoeff=0.7723;MQ=39.27;MQ0=38;MQRankSum=-2.215;QD=13.21;ReadPosRankSum=-0.956;VQSLOD=2.6300;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:18:51.09:0,51,596	./.	0/0:16,0:8:24.07:0,24,289	0/0:9,0:3:6.02:0,6,69	./.	1/1:4,16:17:12.05:377,12,0	1/1:3,8:6:15.02:145,15,0	0/0:52,0:39:99:0,117,1384	./.	0/0:1,0:1:3.01:0,3,36	./.	./.	./.	./.	./.	./.	./.	./.	0/0:46,0:32:84.22:0,84,988	0/0:106,0:104:99:0,292,3472	0/0:25,0:25:66.20:0,66,796	./.	./.	./.	0/0:17,0:22:56.37:0,56,555	./.	./.	0/0:1,0:1:0.47:0,0,1
chr10	12179581	.	G	GAAGC	110.72	PASS	AC=6;AF=0.111;AN=54;BaseQRankSum=-1.147;DP=313;FS=1.813;HRun=0;HaplotypeScore=57.4714;InbreedingCoeff=0.6277;MQ=32.00;MQ0=46;MQRankSum=-0.737;QD=3.82;ReadPosRankSum=0.887;VQSLOD=1.2669;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:64.70:0,65,1142	0/0:7,0:4:12.04:0,12,197	0/0:16,0:6:18.06:0,18,294	0/0:20,0:10:7.21:0,7,221	0/0:13,0:11:21.07:0,21,328	0/0:17,0:16:33.11:0,33,512	0/0:21,0:21:42.14:0,42,657	./.	0/0:6,0:4:9.03:0,9,146	0/0:17,0:11:29.89:0,30,481	0/0:9,0:6:18.06:0,18,266	0/0:6,0:6:18.06:0,18,285	0/0:4,0:3:9.03:0,9,146	0/0:8,0:7:21.07:0,21,344	0/0:9,0:8:24.08:0,24,363	0/0:6,0:5:15.05:0,15,247	0/0:14,0:14:39.13:0,39,614	0/0:7,0:7:21.07:0,21,336	1/1:7,2:4:6.02:121,6,0	1/1:5,0:5:3.01:40,3,0	1/1:12,3:10:3.01:60,3,0	0/0:8,0:4:3.01:0,3,49	0/0:8,0:5:12.04:0,12,197	0/0:10,0:7:18.06:0,18,268	0/0:16,0:15:33.11:0,33,521	0/0:5,0:4:12.04:0,12,178	0/0:7,0:2:6.02:0,6,98	0/0:8,0:7:21.07:0,21,345
chr10	12183661	.	CTTG	C	574.30	PASS	AB=0.875;AC=17;AF=0.472;AN=36;BaseQRankSum=6.375;DP=411;FS=45.673;HRun=0;HaplotypeScore=40.2605;InbreedingCoeff=0.6274;MQ=41.22;MQ0=47;MQRankSum=-3.581;QD=7.36;ReadPosRankSum=-0.211;VQSLOD=0.8510;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:48:24.45:0,24,507	./.	0/0:46,0:2:6.02:0,6,118	0/0:39,0:3:9.03:0,9,152	./.	0/1:36,6:37:11.30:11,0,1071	0/0:18,0:12:9.03:0,9,201	0/0:40,0:24:63.22:0,63,1350	./.	1/1:0,8:4:12.04:196,12,0	1/1:1,1:2:3.01:49,3,0	1/1:0,3:3:2.97:20,3,0	./.	1/1:0,3:3:6.02:98,6,0	./.	1/1:0,3:3:3.01:49,3,0	1/1:0,1:1:3.01:49,3,0	./.	0/0:23,0:19:51.18:0,51,1140	0/0:30,0:30:45.11:0,45,932	0/0:26,0:26:15.52:0,16,336	./.	./.	./.	0/0:33,0:30:60.21:0,60,1285	1/1:1,7:5:6.02:98,6,0	1/1:1,7:7:9.03:147,9,0	./.
chr10	12184086	.	CA	C	286.26	PASS	AC=10;AF=0.385;AN=26;BaseQRankSum=5.762;DP=310;FS=33.388;HRun=2;HaplotypeScore=43.8049;InbreedingCoeff=0.8373;MQ=44.74;MQ0=64;MQRankSum=-3.745;QD=17.89;ReadPosRankSum=1.600;VQSLOD=1.8370;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:65,0:64:99:0,147,2177	./.	./.	./.	./.	0/0:28,0:26:63.07:0,63,925	0/0:14,1:10:24.04:0,24,334	0/0:24,1:17:51.13:0,51,712	./.	./.	./.	./.	1/1:0,4:3:6.02:74,6,0	./.	./.	1/1:0,2:2:6.02:74,6,0	1/1:0,3:3:9.03:111,9,0	./.	0/0:23,0:14:42.12:0,42,581	0/0:31,0:31:71.87:0,72,1052	0/0:28,3:29:37.90:0,38,995	./.	./.	./.	0/0:29,0:28:75.24:0,75,1105	1/1:1,3:1:3.01:37,3,0	1/1:0,3:3:9.03:111,9,0	./.
chr10	12184660	.	AT	A	258.43	PASS	AC=4;AF=0.200;AN=20;BaseQRankSum=5.095;DP=336;FS=2.517;HRun=5;HaplotypeScore=59.8921;InbreedingCoeff=0.9628;MQ=45.66;MQ0=21;MQRankSum=-4.554;QD=6.98;ReadPosRankSum=-0.109;VQSLOD=-0.4525;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:62,1:62:99:0,144,2271	./.	0/0:31,1:14:42.13:0,42,541	0/0:33,0:13:38.96:0,39,441	./.	1/1:3,22:20:24.07:269,24,0	1/1:2,10:12:8.98:88,9,0	0/0:27,0:27:72.23:0,72,957	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	0/0:22,0:20:51.17:0,51,697	0/0:37,0:33:96.27:0,96,1276	0/0:25,0:24:72.24:0,72,985	./.	./.	./.	0/0:42,0:41:99:0,111,1477	./.	./.	./.
chr10	12185219	.	G	GT	1976.62	PASS	AB=0.915;AC=38;AF=0.826;AN=46;BaseQRankSum=9.626;DP=414;FS=18.050;HRun=0;HaplotypeScore=50.8670;InbreedingCoeff=-0.0589;MQ=26.35;MQ0=169;MQRankSum=-1.828;QD=7.08;ReadPosRankSum=5.684;VQSLOD=1.6637;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:54,0:24:29.12:29,0,221	1/1:0,6:5:9.03:123,9,0	./.	./.	1/1:0,2:2:3.01:39,3,0	0/1:24,3:18:15.88:71,0,16	0/1:20,3:13:83.35:83,0,108	./.	1/1:0,2:1:3.01:42,3,0	1/1:0,5:4:12.04:161,12,0	1/1:0,2:2:3.01:41,3,0	1/1:0,2:1:3.01:39,3,0	1/1:0,4:3:9.03:125,9,0	1/1:0,6:6:12.04:158,12,0	1/1:0,3:3:9.03:120,9,0	1/1:0,5:3:9.03:123,9,0	1/1:0,4:1:3.01:39,3,0	1/1:0,4:4:12.04:162,12,0	0/1:30,3:13:42.17:42,0,422	0/1:37,5:40:57.41:57,0,1087	0/1:30,4:15:45.14:45,0,71	1/1:0,10:7:21.07:284,21,0	1/1:0,4:4:9.03:119,9,0	./.	0/0:39,0:36:75.25:0,75,1009	1/1:0,4:3:9.03:125,9,0	1/1:0,3:3:6.02:80,6,0	./.
chr10	12185643	.	CA	C	342.72	PASS	AC=16;AF=0.444;AN=36;BaseQRankSum=5.894;DP=314;FS=2.274;HRun=7;HaplotypeScore=31.7912;InbreedingCoeff=0.7789;MQ=42.78;MQ0=36;MQRankSum=-4.969;QD=11.42;ReadPosRankSum=1.395;VQSLOD=0.9160;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:40:99:0,114,1372	./.	0/0:17,0:8:24.07:0,24,277	0/0:17,0:7:18.06:0,18,223	./.	0/0:39,0:34:69.14:0,69,833	0/0:13,0:9:24.08:0,24,302	0/0:43,0:17:42.09:0,42,511	1/1:0,6:4:9.02:92,9,0	1/1:0,7:6:15.03:153,15,0	./.	1/1:0,2:1:3.01:31,3,0	./.	./.	1/1:0,1:1:3.01:31,3,0	1/1:0,4:3:6.01:61,6,0	./.	./.	0/0:29,0:22:57.18:0,57,717	0/0:25,0:21:51.16:0,51,641	0/0:22,0:19:45.14:0,45,566	1/1:0,3:2:3.01:31,3,0	1/1:0,2:2:3.01:31,3,0	./.	0/0:17,0:17:48.15:0,48,604	1/1:1,4:3:6.01:61,6,0	./.	./.
chr10	12185976	.	TA	T	536.74	PASS	AB=0.696;AC=11;AF=0.458;AN=24;BaseQRankSum=1.424;DP=138;FS=7.778;HRun=9;HaplotypeScore=33.0492;InbreedingCoeff=0.0469;MQ=72.16;MQ0=12;MQRankSum=-3.741;QD=5.83;ReadPosRankSum=-1.562;VQSLOD=-0.3527;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:20,12:28:99:211,0,361	./.	0/0:21,0:7:8.36:0,8,97	0/0:13,0:8:16.78:0,17,143	./.	1/1:1,3:3:5.60:38,6,0	0/1:2,3:3:0.01:0,0,0	0/1:4,6:7:19.97:71,0,20	./.	0/0:1,0:1:3.01:0,3,35	./.	./.	./.	./.	./.	./.	0/0:4,0:1:3.01:0,3,35	./.	0/1:6,2:6:31.97:32,0,65	1/1:1,9:8:21.01:190,21,0	1/1:1,3:2:2.99:27,3,0	./.	./.	./.	0/1:11,8:16:70.66:71,0,272	./.	./.	./.
chr10	12186148	.	C	CAT	1102.20	PASS	AB=0.917;AC=14;AF=0.500;AN=28;BaseQRankSum=5.735;DP=321;FS=0.845;HRun=0;HaplotypeScore=43.1204;InbreedingCoeff=0.4930;MQ=44.42;MQ0=31;MQRankSum=-6.350;QD=11.13;ReadPosRankSum=-1.763;VQSLOD=2.7942;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:65,0:64:99:0,156,1997	./.	0/0:42,0:4:2.97:0,3,20	0/1:32,0:3:5.97:6,0,31	./.	1/1:3,16:18:27.09:443,27,0	1/1:1,13:11:15.05:254,15,0	0/0:29,1:22:57.18:0,57,726	1/1:1,1:1:3.01:49,3,0	1/1:2,6:4:12.04:204,12,0	./.	./.	./.	./.	./.	1/1:0,1:1:3.01:50,3,0	./.	./.	0/1:16,4:12:99:170,0,240	0/0:13,2:13:30.10:0,30,390	0/0:27,2:27:3.30:0,3,597	./.	./.	1/1:1,1:2:3.01:51,3,0	0/0:18,0:18:42.14:0,42,546	./.	./.	./.
chr10	12186300	.	G	GGACCCCC	1285.58	PASS	AB=0.971;AC=15;AF=0.441;AN=34;BaseQRankSum=5.715;DP=321;FS=18.275;HRun=0;HaplotypeScore=90.6412;InbreedingCoeff=0.6402;MQ=42.89;MQ0=61;MQRankSum=-4.717;QD=27.35;ReadPosRankSum=1.106;VQSLOD=1.6622;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:74,0:71:99:0,208,5489	./.	0/0:38,0:9:24.08:0,24,655	0/0:26,0:11:27.09:0,27,730	1/1:2,1:1:3.01:125,3,0	0/1:33,1:34:41.32:41,0,2103	0/0:13,0:12:33.11:0,33,916	0/0:35,0:20:57.20:0,57,1532	1/1:0,1:1:3.01:126,3,0	1/1:1,2:3:9.03:377,9,0	./.	./.	1/1:0,1:1:3.01:125,3,0	./.	1/1:0,3:3:9.03:377,9,0	./.	./.	./.	0/0:24,0:14:39.13:0,39,1059	0/0:10,0:10:24.08:0,24,671	0/0:23,0:22:63.22:0,63,1747	1/1:0,1:1:3.01:125,3,0	./.	./.	0/0:29,0:27:78.27:0,78,2159	./.	1/1:0,1:1:3.01:125,3,0	./.
chr10	12186679	.	T	TC	1805.06	PASS	AB=0.816;AC=29;AF=0.659;AN=44;BaseQRankSum=9.558;DP=327;FS=61.551;HRun=0;HaplotypeScore=65.8804;InbreedingCoeff=0.3698;MQ=64.70;MQ0=1;MQRankSum=-9.585;QD=9.76;ReadPosRankSum=-0.146;VQSLOD=1.0840;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:80.48:0,80,1088	1/1:0,3:1:3.01:36,3,0	0/0:20,0:14:33.58:0,34,355	0/0:17,0:12:24.01:0,24,281	1/1:0,4:3:9.03:141,9,0	0/1:29,6:35:99:140,0,1035	0/1:6,2:8:74.21:74,0,173	0/0:28,1:29:84.21:0,84,1076	./.	1/1:2,7:7:15.01:192,15,0	1/1:1,7:8:15.05:222,15,0	1/1:1,5:6:9.03:127,9,0	1/1:0,3:3:6.02:72,6,0	./.	1/1:1,0:1:2.90:16,3,0	1/1:0,5:4:6.02:95,6,0	1/1:0,7:6:12.04:175,12,0	./.	0/1:12,7:16:29.92:30,0,404	0/1:29,5:34:79.44:79,0,1060	0/1:15,4:18:5.11:5,0,503	./.	1/1:1,4:5:2.30:46,2,0	./.	0/0:34,0:34:84.03:0,84,1096	1/1:1,7:5:15.05:227,15,0	1/1:1,10:9:20.94:290,21,0	./.
chr10	12186740	.	TC	T	715.90	PASS	AB=0.768;AC=4;AF=0.074;AN=54;BaseQRankSum=1.045;DP=417;FS=3.031;HRun=1;HaplotypeScore=75.7160;InbreedingCoeff=-0.1116;MQ=54.51;MQ0=5;MQRankSum=2.283;QD=7.46;ReadPosRankSum=0.348;VQSLOD=0.7904;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:24,10:33:99:202,0,932	0/0:5,0:4:9.03:0,9,137	0/1:12,4:15:99:107,0,375	0/1:10,3:10:95.70:96,0,265	0/0:9,0:7:12.03:0,12,162	0/0:32,0:30:84.26:0,84,1261	0/0:17,0:16:39.13:0,39,596	0/0:39,0:35:96.21:0,96,1375	0/0:5,0:3:9.03:0,9,137	0/0:9,0:8:18.53:0,19,276	0/0:13,0:12:21.07:0,21,319	0/0:7,0:7:15.04:0,15,207	0/0:6,0:5:12.04:0,12,183	0/0:12,0:7:21.07:0,21,319	0/0:7,0:6:12.04:0,12,182	0/0:5,0:5:9.01:0,9,115	0/0:11,0:10:9.03:0,9,137	0/0:2,0:2:3.01:0,3,46	0/0:29,0:24:63.21:0,63,961	0/0:37,0:36:96.32:0,96,1465	0/0:29,0:27:75.24:0,75,1125	0/0:4,0:4:2.94:0,3,18	0/0:14,0:14:18.06:0,18,273	0/0:6,0:5:6.02:0,6,92	0/1:18,15:33:99:419,0,605	0/0:9,0:7:18.06:0,18,274	0/0:13,0:11:24.08:0,24,365	./.
chr10	12187338	.	T	TAAAATACCTCG	2815.97	PASS	AB=0.880;AC=17;AF=0.500;AN=34;BaseQRankSum=4.698;DP=326;FS=36.325;HRun=0;HaplotypeScore=109.2469;InbreedingCoeff=0.4298;MQ=58.89;MQ0=6;MQRankSum=-7.106;QD=27.61;ReadPosRankSum=0.973;VQSLOD=1.4515;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:30.43:0,30,3726	./.	0/0:27,0:19:54.18:0,54,1800	0/0:23,0:19:54.19:0,54,1811	1/1:3,10:4:12.04:591,12,0	0/0:29,2:28:84.27:0,84,3044	0/0:13,1:14:39.13:0,39,1301	0/0:21,1:21:60.20:0,60,2063	./.	1/1:2,3:2:3.01:177,3,0	1/1:1,3:4:3.01:177,3,0	./.	./.	./.	./.	./.	1/1:0,4:5:6.02:339,6,0	1/1:1,1:1:3.01:75,3,0	0/1:12,2:14:99:313,0,1212	0/1:25,5:29:99:453,0,2478	0/1:18,2:20:99:297,0,1840	./.	1/1:1,5:3:6.02:354,6,0	./.	0/0:41,0:39:99:0,108,3818	1/1:1,2:2:3.01:178,3,0	./.	./.
chr10	12187630	.	T	TG	90.45	PASS	AC=8;AF=0.267;AN=30;BaseQRankSum=3.980;DP=406;FS=4.729;HRun=5;HaplotypeScore=31.9241;InbreedingCoeff=0.6089;MQ=41.73;MQ0=53;MQRankSum=-2.240;QD=9.05;ReadPosRankSum=-0.435;VQSLOD=-0.4164;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:75,0:66:69.04:0,69,705	./.	0/0:44,0:3:4.82:0,5,37	0/0:61,0:3:6:0,6,55	0/0:2,1:2:0:0,0,0	0/0:31,0:30:47.94:0,48,467	0/0:18,0:15:6.02:0,6,64	0/0:37,0:31:75.19:0,75,806	./.	./.	./.	1/1:1,1:1:3.01:39,3,0	./.	./.	./.	./.	./.	./.	0/0:21,0:15:42.11:0,42,451	0/0:28,2:28:17.69:0,18,528	0/0:19,0:14:6.01:0,6,64	./.	1/1:2,1:2:3.01:39,3,0	./.	0/0:48,0:46:63.12:0,63,665	1/1:1,1:1:3.01:39,3,0	1/1:1,2:2:6.02:79,6,0	./.
chr10	12190382	.	T	TA	3188.83	PASS	AB=0.680;AC=34;AF=0.850;AN=40;BaseQRankSum=6.801;DP=504;FS=3.255;HRun=6;HaplotypeScore=33.1492;InbreedingCoeff=0.1381;MQ=28.49;MQ0=44;MQRankSum=-0.754;QD=9.14;ReadPosRankSum=1.555;VQSLOD=-0.2570;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	1/1:1,24:22:18.06:226,18,0	./.	./.	0/1:31,19:40:99:565,0,497	1/1:1,14:14:24.08:302,24,0	1/1:1,18:16:48.13:580,48,0	1/1:1,20:18:15.05:189,15,0	1/1:1,8:8:9.03:112,9,0	./.	1/1:0,10:10:6.02:75,6,0	1/1:0,12:12:6.02:75,6,0	1/1:1,10:10:3.01:38,3,0	1/1:0,7:7:6.02:75,6,0	1/1:1,7:5:3.01:38,3,0	0/1:18,12:25:99:292,0,350	0/1:19,20:26:73.78:95,0,74	0/1:7,11:17:0:0,0,0	1/1:2,20:19:3.01:38,3,0	1/1:0,15:12:5.93:55,6,0	./.	0/0:23,0:22:27.02:0,27,264	1/1:1,11:10:30.08:363,30,0	1/1:0,18:17:12.04:151,12,0	1/1:0,8:7:3.01:38,3,0
chr10	12190764	.	C	CGTGT	947.19	PASS	AB=0.910;AC=20;AF=0.435;AN=46;BaseQRankSum=-1.503;DP=508;FS=0.866;HRun=0;HaplotypeScore=116.0702;InbreedingCoeff=0.0227;MQ=54.33;MQ0=10;MQRankSum=-1.444;QD=2.97;ReadPosRankSum=-3.356;VQSLOD=0.5509;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:39,16:60:99:394,0,480	./.	1/1:29,0:16:0.89:2,1,0	./.	0/0:11,0:11:2.99:0,3,23	0/1:18,0:22:25.86:26,0,120	0/1:12,0:19:27.77:54,0,28	1/1:30,0:30:16.97:188,17,0	0/1:15,0:14:7:7,0,60	0/0:13,0:13:2.92:0,3,23	0/0:15,0:14:5.99:0,6,48	0/0:9,0:9:2.99:0,3,24	0/0:8,0:8:2.99:0,3,24	./.	0/0:11,0:9:2.99:0,3,24	0/0:7,0:7:2.99:0,3,24	./.	1/1:7,0:7:5.95:42,6,0	1/1:22,0:20:11.75:157,12,0	1/1:30,0:23:3:25,3,0	0/1:35,0:34:19.75:100,0,20	./.	0/1:13,0:13:15.93:16,0,38	0/0:11,0:11:2.99:0,3,24	0/0:28,1:33:11.62:0,12,233	0/1:20,0:19:0.47:50,0,0	0/1:12,0:8:13.14:13,0,18	1/1:1,0:1:2.60:10,3,0
chr10	12190799	.	GTC	G	934.74	PASS	AB=0.963;AC=35;AF=0.648;AN=54;BaseQRankSum=5.536;DP=377;FS=4.630;HRun=0;HaplotypeScore=81.6233;InbreedingCoeff=0.5226;MQ=56.36;MQ0=8;MQRankSum=-4.149;QD=7.19;ReadPosRankSum=-2.594;VQSLOD=2.3577;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:68,0:67:62.18:0,62,1398	./.	0/0:30,0:14:14.38:0,14,178	0/0:40,0:16:10.26:0,10,236	1/1:0,3:3:3.01:46,3,0	0/0:16,0:16:6.20:0,6,282	0/0:15,0:15:30.02:0,30,337	0/1:23,0:22:27.08:27,0,306	1/1:4,3:7:11.92:153,12,0	1/1:5,1:3:5.98:66,6,0	1/1:1,5:6:6.02:89,6,0	1/1:3,1:4:5.95:63,6,0	1/1:3,1:4:3.01:45,3,0	0/1:7,1:8:0:0,0,0	1/1:2,2:4:3.01:45,3,0	1/1:3,1:4:3.01:45,3,0	1/1:4,0:3:2.92:17,3,0	1/1:4,0:4:8.91:61,9,0	0/1:14,0:11:15.04:15,0,154	0/0:14,1:9:20.63:0,21,189	0/0:38,0:37:29.80:0,30,453	1/1:6,3:6:3:25,3,0	1/1:5,2:6:12.01:139,12,0	1/1:7,3:9:5.96:69,6,0	0/0:23,0:21:21.59:0,22,419	1/1:6,0:6:14.83:123,15,0	1/1:2,4:5:5.80:63,6,0	1/1:0,1:1:2.99:23,3,0
chr10	12190826	.	GTA	G	1358.06	PASS	AB=0.873;AC=37;AF=0.712;AN=52;BaseQRankSum=10.196;DP=355;FS=0.596;HRun=0;HaplotypeScore=97.4943;InbreedingCoeff=0.2787;MQ=74.42;MQ0=0;MQRankSum=-7.934;QD=7.38;ReadPosRankSum=-1.347;VQSLOD=2.8400;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:60,0:60:99:0,156,2747	1/1:0,2:2:6.02:81,6,0	0/0:20,0:16:15.86:0,16,277	0/0:41,1:30:39.84:0,40,611	./.	0/1:24,3:27:73.79:74,0,774	0/1:11,3:14:91.98:92,0,522	0/1:28,5:30:3.48:3,0,1154	1/1:3,4:6:9.03:131,9,0	1/1:0,2:2:6.02:88,6,0	1/1:4,6:9:9.02:112,9,0	1/1:0,1:1:3.01:44,3,0	1/1:1,2:3:6.02:87,6,0	1/1:0,3:3:9.03:131,9,0	1/1:1,3:4:6.02:87,6,0	1/1:0,3:3:9.03:131,9,0	1/1:0,1:1:3.01:44,3,0	1/1:0,3:3:9.03:132,9,0	0/1:9,1:10:19.89:20,0,274	0/0:17,2:15:1.42:0,1,695	0/1:37,7:43:23.08:23,0,1674	1/1:1,2:2:6:68,6,0	1/1:1,2:2:3:25,3,0	1/1:2,5:7:2.82:24,3,0	0/0:29,0:26:63.21:0,63,1154	1/1:0,2:2:6.02:82,6,0	1/1:0,2:2:2.84:43,3,0	./.
chr10	12190869	.	GCACATA	G	5524.80	PASS	AB=0.871;AC=40;AF=0.741;AN=54;BaseQRankSum=12.377;DP=400;FS=0.449;HRun=0;HaplotypeScore=124.3445;InbreedingCoeff=0.3768;MQ=77.49;MQ0=0;MQRankSum=-12.584;QD=23.12;ReadPosRankSum=1.006;VQSLOD=4.2854;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:59,0:59:99:0,153,5111	1/1:0,5:5:15.05:349,15,0	0/0:36,0:35:79.30:0,79,2243	0/0:35,0:34:92.29:0,92,2199	1/1:0,2:2:6.02:139,6,0	0/1:23,8:31:99:477,0,1885	0/1:21,1:22:3.63:4,0,1854	0/1:23,11:34:99:463,0,1520	1/1:0,9:8:21.07:488,21,0	1/1:2,4:6:18.02:369,18,0	1/1:1,6:6:12.04:279,12,0	1/1:1,3:4:9.03:209,9,0	1/1:0,6:6:15.05:349,15,0	1/1:0,6:6:18.06:418,18,0	1/1:1,3:4:9.03:209,9,0	1/1:2,2:4:3.01:70,3,0	./.	1/1:1,2:3:8.98:159,9,0	0/1:14,2:14:40.43:40,0,759	0/1:21,3:23:99:140,0,2031	0/1:30,2:32:1.34:1,0,2044	1/1:0,3:3:9.03:209,9,0	1/1:0,3:3:9.03:209,9,0	1/1:0,5:5:6.02:107,6,0	0/0:30,0:28:78.21:0,78,2586	1/1:0,9:9:24.08:559,24,0	1/1:0,3:3:9.03:209,9,0	1/1:0,1:1:3.01:70,3,0
chr10	12190948	.	G	GGAGTATCAGAACTTCTGAGGATGAT	47136.66	PASS	AB=0.971;AC=42;AF=0.750;AN=56;BaseQRankSum=9.188;DP=481;FS=45.006;HRun=0;HaplotypeScore=308.6813;InbreedingCoeff=0.3584;MQ=92.92;MQ0=0;MQRankSum=-16.408;QD=140.71;ReadPosRankSum=3.365;VQSLOD=3.0025;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:59,0:59:99:0,175,10149	1/1:4,0:5:12.04:882,12,0	0/0:27,0:27:78.25:0,78,3414	0/0:34,0:34:91.85:0,92,4138	1/1:10,3:14:30.10:2569,30,0	0/1:33,0:33:99:2600,0,3533	0/1:25,0:25:99:1794,0,2822	0/1:39,0:39:99:1395,0,3538	1/1:5,1:6:18.06:1443,18,0	1/1:15,1:16:48.15:3876,48,0	1/1:15,1:16:36.12:3431,36,0	1/1:8,1:9:21.07:1943,21,0	1/1:6,1:7:14.98:994,15,0	1/1:8,0:8:15.05:1489,15,0	1/1:4,1:5:12.04:1155,12,0	1/1:1,1:2:6.02:682,6,0	1/1:2,1:3:9.03:863,9,0	1/1:1,0:1:3.01:291,3,0	0/1:20,0:20:99:920,0,1923	0/1:26,7:33:99:3860,0,1914	0/1:13,0:13:99:522,0,1329	1/1:16,3:19:45.15:4322,45,0	1/1:10,2:12:30.10:2919,30,0	1/1:8,1:9:18.06:1726,18,0	0/0:26,0:26:75.26:0,75,4833	1/1:20,0:20:51.16:4573,51,0	1/1:14,4:15:36.12:2512,36,0	1/1:1,1:2:5.98:376,6,0
chr10	12190986	.	T	TA	8589.22	PASS	AB=0.761;AC=38;AF=0.731;AN=52;BaseQRankSum=17.391;DP=542;FS=5.852;HRun=2;HaplotypeScore=121.0471;InbreedingCoeff=0.3999;MQ=89.12;MQ0=0;MQRankSum=-12.079;QD=21.58;ReadPosRankSum=2.059;VQSLOD=4.7588;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,159,1955	./.	0/0:27,0:28:74.85:0,75,828	0/0:29,0:29:62.36:0,62,772	1/1:3,11:14:33.07:450,33,0	0/1:22,17:39:99:573,0,677	0/1:14,5:19:99:121,0,432	0/1:34,8:42:99:210,0,1001	1/1:0,9:9:24.01:301,24,0	1/1:1,16:17:45.15:646,45,0	1/1:1,15:16:36.01:468,36,0	1/1:1,5:7:15.05:209,15,0	1/1:0,12:12:30.10:429,30,0	1/1:1,9:10:30.10:424,30,0	1/1:0,5:5:15.05:215,15,0	1/1:1,5:6:9.03:129,9,0	1/1:1,10:11:23.97:317,24,0	1/1:0,7:7:21.04:276,21,0	0/1:11,5:16:99:133,0,326	0/1:26,24:50:99:577,0,731	0/1:21,7:28:99:146,0,589	1/1:2,18:20:51.09:681,51,0	1/1:0,18:18:39.04:525,39,0	1/1:0,12:12:27.09:385,27,0	0/0:31,0:31:87.19:0,87,1033	1/1:1,18:19:48.16:689,48,0	1/1:1,20:19:48.16:687,48,0	./.
chr10	12191091	.	ACGTGTGTGCG	A	2445.03	PASS	AB=0.791;AC=24;AF=0.545;AN=44;BaseQRankSum=8.906;DP=420;FS=69.111;HRun=0;HaplotypeScore=177.4288;InbreedingCoeff=0.6731;MQ=73.58;MQ0=3;MQRankSum=-7.564;QD=27.47;ReadPosRankSum=1.496;VQSLOD=0.8633;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:89,0:89:99:0,256,13394	0/1:2,3:5:0:0,0,0	0/0:24,0:13:35.37:0,35,712	0/0:22,0:14:15.32:0,15,448	1/1:3,9:12:6.49:185,6,0	0/1:21,1:22:34.36:34,0,1801	0/0:29,0:29:78.25:0,78,3891	0/0:32,0:33:7.86:0,8,2583	./.	1/1:2,6:8:15.05:485,15,0	./.	1/1:1,2:3:2.99:24,3,0	1/1:1,3:4:3.01:81,3,0	1/1:3,8:11:12.04:387,12,0	1/1:3,2:5:3.01:101,3,0	1/1:2,2:4:3.01:101,3,0	./.	1/1:1,3:4:9.03:305,9,0	0/0:20,0:20:60.20:0,60,2787	0/0:11,0:11:24.08:0,24,1233	0/0:47,2:51:92.88:0,93,5893	./.	./.	./.	0/0:22,0:22:51.18:0,51,2700	1/1:1,3:4:9.03:317,9,0	1/1:1,4:5:12.04:387,12,0	1/1:0,2:2:6.02:203,6,0
chr10	12191092	.	CGTGTGT	C	1115.94	PASS	AB=1.000;AC=21;AF=0.500;AN=42;BaseQRankSum=8.708;DP=390;FS=72.041;HRun=0;HaplotypeScore=142.5365;InbreedingCoeff=0.7383;MQ=73.79;MQ0=3;MQRankSum=-8.159;QD=24.80;ReadPosRankSum=2.206;VQSLOD=0.5357;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:89,0:89:99:0,256,9183	0/1:3,0:3:0:0,0,0	0/0:23,0:12:28.51:0,29,509	0/0:23,0:13:16.93:0,17,291	1/1:9,0:9:6.29:35,6,0	0/0:19,3:22:2.61:0,3,1324	0/0:27,1:28:75.24:0,75,2599	0/0:27,2:29:4.46:0,4,1695	./.	1/1:6,0:6:15.05:253,15,0	./.	./.	1/1:3,0:3:3.01:47,3,0	1/1:8,0:8:12.04:233,12,0	1/1:2,0:2:3.01:53,3,0	1/1:2,0:2:3.01:52,3,0	./.	1/1:3,0:3:9.03:131,9,0	0/0:20,0:20:57.20:0,57,1939	0/0:10,0:10:24.08:0,24,861	0/0:50,0:50:99:0,115,4074	./.	./.	./.	0/0:23,0:23:57.20:0,57,2057	1/1:3,0:3:9.03:164,9,0	1/1:4,0:4:12.04:218,12,0	1/1:2,0:2:6.02:90,6,0
chr10	12191116	.	TGTGCACGCGCGCGCGCGCGC	T	2567.18	PASS	AB=1.000;AC=24;AF=0.600;AN=40;BaseQRankSum=7.484;DP=308;FS=43.638;HRun=0;HaplotypeScore=162.9037;InbreedingCoeff=0.5155;MQ=53.92;MQ0=9;MQRankSum=-6.199;QD=30.93;ReadPosRankSum=0.665;VQSLOD=1.5483;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:79,0:79:99:0,204,13617	./.	1/1:23,0:3:0.47:1,0,0	0/1:16,0:3:11.28:11,0,99	1/1:0,1:6:6.49:328,6,0	0/1:20,0:20:99:114,0,1630	0/0:23,0:23:60.21:0,60,3619	0/0:18,0:16:39.07:0,39,1951	./.	1/1:0,2:2:6.02:343,6,0	./.	./.	1/1:0,1:1:3.01:147,3,0	1/1:0,3:4:6.02:338,6,0	1/1:0,0:1:3.01:137,3,0	1/1:0,0:1:3.01:136,3,0	./.	1/1:1,0:3:5.89:302,6,0	0/0:17,0:16:48.16:0,48,2511	0/0:8,0:7:13.36:0,13,706	0/0:40,0:40:90.27:0,90,5692	./.	./.	./.	0/0:24,0:24:57.19:0,57,4164	1/1:1,1:2:6.02:343,6,0	1/1:0,1:1:3.01:172,3,0	1/1:1,2:2:6.02:343,6,0
chr10	12191119	.	GCA	G	47.16	PASS	AB=1.000;AC=18;AF=0.450;AN=40;BaseQRankSum=6.219;DP=295;FS=5.675;HRun=0;HaplotypeScore=89.1458;InbreedingCoeff=0.6180;MQ=54.10;MQ0=9;MQRankSum=-4.328;QD=1.15;ReadPosRankSum=1.145;VQSLOD=1.3450;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:67,6:73:88.16:0,88,1813	./.	0/1:18,0:3:0:0,0,0	0/0:15,0:2:3.44:0,3,21	1/1:6,0:6:5.88:36,6,0	0/0:21,0:21:12.70:0,13,279	0/0:23,0:23:60.06:0,60,695	0/0:16,0:14:25.76:0,26,354	./.	1/1:2,0:2:5.64:27,6,0	./.	./.	0/0:1,0:1:0.89:0,1,2	1/1:4,0:4:5.54:25,6,0	1/1:1,0:1:2.80:13,3,0	1/1:1,0:1:2.80:13,3,0	./.	0/1:3,0:3:0.33:13,0,0	0/0:18,0:17:32.49:0,32,512	0/0:8,0:7:12.01:0,12,135	0/0:38,0:38:78.16:0,78,1047	./.	./.	./.	0/0:24,0:24:53.03:0,53,587	1/1:2,0:2:3.73:16,4,0	1/1:1,0:1:2.84:14,3,0	1/1:3,0:2:5.64:27,6,0
chr10	12191121	.	ACGCGCGCGCGCG	A	1470.11	PASS	AB=1.000;AC=21;AF=0.553;AN=38;BaseQRankSum=7.029;DP=289;FS=52.110;HRun=0;HaplotypeScore=124.8649;InbreedingCoeff=0.5757;MQ=49.74;MQ0=9;MQRankSum=-6.540;QD=31.96;ReadPosRankSum=0.814;VQSLOD=1.1667;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:73,0:73:99:0,171,7457	./.	./.	0/0:15,0:2:0.44:0,0,58	1/1:1,4:6:6.49:195,6,0	0/1:22,0:22:61.47:61,0,832	0/0:22,0:22:54.13:0,54,1686	0/0:16,0:14:30.10:0,30,1080	./.	1/1:2,0:2:6.02:186,6,0	./.	./.	1/1:1,0:1:3.01:74,3,0	1/1:3,1:4:6.02:199,6,0	1/1:0,1:1:3.01:98,3,0	1/1:0,1:1:3.01:98,3,0	./.	1/1:1,0:3:8.95:212,9,0	0/0:18,0:17:39.13:0,39,1348	0/0:8,0:7:8.43:0,8,277	0/0:37,0:36:69.69:0,70,3006	./.	./.	./.	0/0:24,0:24:51.17:0,51,2307	1/1:2,0:2:6.02:203,6,0	1/1:1,0:1:3.01:96,3,0	1/1:3,0:2:6.02:194,6,0
chr10	12191135	.	GCA	G	806.73	PASS	AB=0.796;AC=10;AF=0.278;AN=36;BaseQRankSum=-0.106;DP=382;FS=14.229;HRun=0;HaplotypeScore=120.3396;InbreedingCoeff=0.2905;MQ=44.75;MQ0=11;MQRankSum=3.181;QD=3.95;ReadPosRankSum=4.682;VQSLOD=1.7160;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:65,10:75:44.37:689,44,0	./.	./.	./.	./.	1/1:16,0:25:2.68:11,3,0	0/0:18,0:22:1.60:0,2,22	0/0:23,0:21:6.09:0,6,80	0/0:7,0:7:5.93:0,6,47	0/0:7,0:7:14.82:0,15,99	./.	./.	./.	0/0:10,0:10:2.99:0,3,24	0/0:8,0:7:3.47:0,3,26	0/0:1,0:1:0.47:0,0,1	0/0:10,0:9:2.97:0,3,20	0/0:11,0:10:9.37:0,9,48	0/1:16,0:16:8.96:52,0,9	1/1:6,0:8:0.41:1,0,0	1/1:44,0:40:2.71:16,3,0	./.	0/0:7,0:6:1.24:0,1,3	./.	0/1:15,17:33:7.92:147,0,8	0/0:5,0:5:7.16:0,7,44	0/0:7,0:7:2.99:0,3,24	./.
chr10	12191518	.	CT	C	5325.91	PASS	AB=0.776;AC=40;AF=0.714;AN=56;BaseQRankSum=18.398;DP=580;FS=105.212;HRun=5;HaplotypeScore=189.1173;InbreedingCoeff=0.5552;MQ=103.38;MQ0=0;MQRankSum=-17.785;QD=17.52;ReadPosRankSum=4.051;VQSLOD=0.2297;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:89,0:89:99:0,259,3440	1/1:0,2:2:6.02:68,6,0	0/0:43,0:43:99:0,111,1449	0/0:39,0:39:86.89:0,87,1165	1/1:2,12:14:33.09:363,33,0	0/1:25,10:35:99:208,0,828	0/1:18,9:27:99:201,0,546	0/1:36,11:47:99:157,0,1102	1/1:0,6:6:18.05:204,18,0	1/1:2,19:21:51.14:577,51,0	1/1:0,6:6:15.03:161,15,0	1/1:0,11:11:33.09:373,33,0	1/1:1,13:14:33.09:373,33,0	1/1:0,9:9:21.06:237,21,0	1/1:2,8:10:18.05:204,18,0	1/1:1,9:10:24.07:271,24,0	1/1:0,2:2:6.02:68,6,0	1/1:1,10:11:30.09:340,30,0	0/0:26,0:26:69.21:0,69,914	0/1:18,8:26:99:100,0,667	0/0:23,4:27:7.29:0,7,837	1/1:2,5:7:15.04:167,15,0	1/1:0,6:6:12.03:134,12,0	1/1:0,2:2:6.02:68,6,0	0/0:52,0:52:99:0,147,1988	1/1:1,12:13:33.09:374,33,0	1/1:1,23:24:57.16:644,57,0	1/1:0,1:1:3.01:34,3,0
chr10	12191923	.	C	CAT	4788.25	PASS	AB=0.780;AC=36;AF=0.643;AN=56;BaseQRankSum=17.379;DP=586;FS=84.287;HRun=0;HaplotypeScore=227.5763;InbreedingCoeff=0.6105;MQ=86.60;MQ0=0;MQRankSum=-16.509;QD=15.06;ReadPosRankSum=7.208;VQSLOD=1.5109;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:59,0:58:99:0,163,2365	1/1:0,6:6:18.05:211,18,0	0/0:40,0:40:99:0,114,1619	0/0:44,0:44:99:0,111,1588	1/1:4,9:13:20.80:215,21,0	0/1:31,16:47:99:476,0,894	0/1:23,7:30:99:149,0,748	0/0:42,1:43:50.64:0,51,1002	1/1:12,12:24:18.89:434,19,0	1/1:5,12:17:16.49:417,16,0	1/1:5,7:12:21.06:239,21,0	1/1:7,6:13:15.21:206,15,0	1/1:4,8:12:14.44:277,14,0	1/1:5,9:14:37.90:378,38,0	1/1:9,7:16:33.49:328,33,0	1/1:4,9:13:24.69:328,25,0	1/1:0,1:1:3.01:35,3,0	0/1:2,2:4:3.05:62,0,3	0/0:22,0:22:54.13:0,54,780	0/1:31,4:35:55.26:55,0,956	0/0:17,2:19:51.15:0,51,727	1/1:4,5:9:12.03:138,12,0	1/1:5,7:11:18.05:208,18,0	1/1:3,4:7:3.89:74,4,0	0/0:40,0:40:99:0,117,1723	1/1:6,7:13:6.59:232,7,0	1/1:12,8:20:22.71:328,23,0	0/0:1,0:1:2.04:0,2,6
chr10	12191928	.	G	GGGTGATGAC	22491.67	PASS	AB=0.769;AC=35;AF=0.625;AN=56;BaseQRankSum=15.800;DP=657;FS=74.557;HRun=0;HaplotypeScore=279.4336;InbreedingCoeff=-0.0474;MQ=81.96;MQ0=0;MQRankSum=-17.457;QD=48.27;ReadPosRankSum=7.438;VQSLOD=1.7559;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:62,0:61:99:0,166,5197	1/1:1,6:7:21.07:851,21,0	0/0:44,0:44:99:0,129,3429	0/0:46,0:46:99:0,132,3585	1/1:10,9:19:18.06:772,18,0	0/1:31,16:47:99:1959,0,1980	0/1:25,6:32:99:821,0,1627	0/1:49,1:50:99:1121,0,1889	0/1:16,12:28:63.83:1951,0,64	1/1:11,12:23:34.61:2330,35,0	1/1:11,7:18:30.10:1292,30,0	0/1:6,6:12:61.13:754,0,61	1/1:5,8:13:0.96:1220,1,0	0/1:8,8:17:56.56:1212,0,57	0/1:8,7:15:90.86:869,0,91	0/1:4,9:13:15.03:1175,0,15	1/1:4,1:5:3.01:130,3,0	1/1:4,2:6:18.06:584,18,0	0/1:26,0:26:99:267,0,1573	0/1:30,4:34:99:432,0,2180	0/1:21,2:23:36.44:36,0,1323	1/1:11,5:16:21.07:864,21,0	1/1:9,7:15:24.07:930,24,0	1/1:6,4:10:13.45:450,13,0	0/0:39,0:39:99:0,117,3812	0/1:8,7:15:6.43:1212,0,6	0/1:8,8:16:26.13:1216,0,26	1/1:5,0:5:3.01:43,3,0
chr10	12192104	.	GT	G	2271.38	PASS	AB=0.709;AC=6;AF=0.107;AN=56;BaseQRankSum=7.386;DP=739;FS=1.865;HRun=5;HaplotypeScore=78.3250;InbreedingCoeff=-0.1207;MQ=76.60;MQ0=1;MQRankSum=2.083;QD=9.01;ReadPosRankSum=0.530;VQSLOD=0.3264;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,123,1678	0/0:11,0:9:24.08:0,24,327	0/0:36,0:36:90.26:0,90,1181	0/0:26,0:26:69.22:0,69,920	0/0:31,0:29:87.25:0,87,1168	0/1:24,18:40:99:365,0,817	0/1:14,14:27:99:330,0,480	0/1:28,19:47:99:458,0,810	0/0:20,0:18:39.13:0,39,533	0/0:24,0:17:45.15:0,45,615	0/0:20,0:19:57.19:0,57,769	0/0:18,0:17:51.16:0,51,683	0/0:16,0:13:36.12:0,36,492	0/0:15,0:14:39.13:0,39,532	0/0:22,0:20:63.20:0,63,846	0/0:15,0:15:42.14:0,42,574	0/0:15,0:15:45.13:0,45,598	0/0:13,0:13:33.11:0,33,451	0/1:22,22:44:99:577,0,584	0/1:42,9:51:99:131,0,1441	0/1:19,21:40:99:535,0,609	0/0:13,0:7:18.02:0,18,225	0/0:24,0:23:60.20:0,60,819	0/0:9,0:9:27.08:0,27,353	0/0:51,0:51:99:0,147,2011	0/0:28,0:23:66.21:0,66,889	0/0:26,0:21:57.19:0,57,779	0/0:7,0:7:21.07:0,21,287
chr10	12192692	.	T	TA	12406.22	PASS	AB=0.702;AC=42;AF=0.750;AN=56;BaseQRankSum=18.766;DP=755;FS=9.088;HRun=2;HaplotypeScore=133.2035;InbreedingCoeff=0.4274;MQ=71.07;MQ0=14;MQRankSum=-4.822;QD=22.19;ReadPosRankSum=3.349;VQSLOD=4.0257;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:65,0:65:99:0,190,2324	1/1:0,9:7:21.07:302,21,0	0/0:48,0:43:99:0,123,1490	0/0:39,0:35:99:0,102,1242	1/1:3,18:20:45.11:625,45,0	0/1:17,20:35:99:558,0,468	0/1:13,20:27:99:323,0,404	0/1:36,12:37:76.68:77,0,976	1/1:5,15:20:51.16:718,51,0	1/1:2,28:22:57.19:821,57,0	1/1:1,17:17:48.16:688,48,0	1/1:1,17:13:36.09:487,36,0	1/1:1,12:12:33.08:452,33,0	1/1:1,18:18:48.16:691,48,0	1/1:0,13:10:27.09:389,27,0	1/1:4,8:11:27.06:360,27,0	1/1:3,12:14:33.10:458,33,0	1/1:3,11:14:36.12:515,36,0	0/1:25,12:32:99:254,0,647	0/1:28,16:36:99:286,0,827	0/1:24,27:51:99:936,0,711	1/1:5,11:15:27.09:379,27,0	1/1:3,17:16:36.12:518,36,0	1/1:0,20:19:57.16:798,57,0	0/0:44,0:44:99:0,129,1596	1/1:1,21:21:60.17:842,60,0	1/1:1,18:15:39.13:544,39,0	1/1:0,9:9:27.09:388,27,0
chr10	12192780	.	GA	G	9822.32	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=20.201;DP=830;FS=0.590;HRun=1;HaplotypeScore=184.3533;InbreedingCoeff=0.9975;MQ=59.88;MQ0=5;MQRankSum=-9.972;QD=29.50;ReadPosRankSum=3.381;VQSLOD=4.6052;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:85,0:85:99:0,253,3946	1/1:2,9:7:18.04:232,18,0	0/0:35,0:32:93.27:0,93,1357	0/0:28,0:24:62.90:0,63,957	1/1:1,22:20:23.83:312,24,0	0/0:35,0:34:99:0,99,1577	0/0:56,0:52:99:0,157,2448	0/0:52,0:49:99:0,144,2239	1/1:0,17:17:51.08:664,51,0	1/1:1,20:17:51.17:693,51,0	1/1:0,21:18:38.67:503,39,0	1/1:1,17:16:48.07:625,48,0	1/1:0,15:15:42.14:582,42,0	1/1:0,25:25:62.73:825,63,0	1/1:1,18:17:48.15:653,48,0	1/1:0,15:14:42.14:586,42,0	1/1:0,20:20:45.13:622,45,0	1/1:0,17:17:48.16:667,48,0	0/0:42,0:41:99:0,123,1943	0/0:49,0:48:99:0,141,2222	0/0:91,0:91:99:0,265,4159	1/1:1,23:21:57.07:721,57,0	1/1:0,13:10:23.99:310,24,0	1/1:1,31:31:42.20:564,42,0	0/0:24,0:24:69.22:0,69,1073	1/1:2,14:13:33.11:459,33,0	1/1:0,18:18:39.06:517,39,0	1/1:1,7:8:21.07:289,21,0
chr10	12192972	.	C	CT	15008.14	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=24.259;DP=1000;FS=6.593;HRun=2;HaplotypeScore=174.0224;InbreedingCoeff=0.9928;MQ=65.60;MQ0=0;MQRankSum=-4.767;QD=37.90;ReadPosRankSum=5.458;VQSLOD=3.6001;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:99,0:99:99:0,274,3382	1/1:2,7:7:15.05:216,15,0	0/0:60,0:58:99:0,159,1917	0/0:58,0:56:99:0,136,1818	1/1:1,23:23:60.20:863,60,0	0/0:38,0:38:99:0,108,1339	0/0:53,0:53:99:0,147,1822	0/0:71,0:71:99:0,211,2516	1/1:4,28:32:81.27:1151,81,0	1/1:1,19:18:51.17:734,51,0	1/1:0,29:29:81.23:1142,81,0	1/1:0,16:16:48.16:691,48,0	1/1:0,18:18:51.17:734,51,0	1/1:0,28:28:84.28:1209,84,0	1/1:0,23:22:63.21:907,63,0	1/1:0,18:18:48.16:691,48,0	1/1:1,23:24:69.23:993,69,0	1/1:1,18:19:25.16:745,25,0	0/0:49,0:49:99:0,129,1599	0/0:65,0:60:99:0,168,2044	0/0:63,0:63:99:0,184,2252	1/1:1,24:24:66.22:949,66,0	1/1:1,28:28:69.23:993,69,0	1/1:1,27:28:65.51:926,66,0	0/0:48,0:44:99:0,117,1450	1/1:2,24:23:66.22:942,66,0	1/1:0,24:24:66.22:950,66,0	1/1:0,4:4:12.04:173,12,0
chr10	12203877	.	AG	A	846.79	PASS	AB=0.591;AC=2;AF=0.036;AN=56;BaseQRankSum=5.154;DP=771;FS=3.999;HRun=1;HaplotypeScore=59.7413;InbreedingCoeff=-0.0027;MQ=49.14;MQ0=63;MQRankSum=1.452;QD=12.83;ReadPosRankSum=-1.667;VQSLOD=1.8245;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:75,0:71:99:0,129,1994	0/0:8,0:7:15.05:0,15,240	0/0:18,0:1:3.01:0,3,48	0/0:26,0:1:3.01:0,3,48	0/0:20,0:19:33.03:0,33,496	0/1:12,17:21:11.54:425,0,12	0/1:7,30:34:99:511,0,126	0/0:44,0:33:96.31:0,96,1504	0/0:24,0:24:51.17:0,51,811	0/0:25,0:23:69.19:0,69,1053	0/0:12,0:12:30.09:0,30,453	0/0:26,0:25:45.15:0,45,715	0/0:17,0:17:32.47:0,32,524	0/0:23,0:23:42.12:0,42,639	0/0:27,0:27:72.06:0,72,1127	0/0:27,0:27:63.05:0,63,1007	0/0:32,0:32:72.22:0,72,1120	0/0:16,0:15:21.07:0,21,335	0/0:48,0:35:99:0,102,1560	0/0:28,0:24:69.22:0,69,1071	0/0:58,0:54:99:0,111,1756	0/0:24,0:23:57.19:0,57,908	0/0:22,0:22:39.13:0,39,619	0/0:27,0:26:51.17:0,51,812	0/0:18,0:17:48.14:0,48,722	0/0:24,0:24:72.21:0,72,1099	0/0:27,0:27:57.19:0,57,901	0/0:9,0:8:21.07:0,21,336
chr10	12206805	.	GAT	G	7047.28	PASS	AB=0.737;AC=48;AF=0.889;AN=54;BaseQRankSum=6.046;DP=461;FS=2.657;HRun=0;HaplotypeScore=67.6010;InbreedingCoeff=0.4828;MQ=58.35;MQ0=6;MQRankSum=-0.199;QD=16.20;ReadPosRankSum=1.292;VQSLOD=4.7273;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:26,4:31:51.34:51,0,626	1/1:1,6:8:15.05:181,15,0	./.	0/0:7,0:2:1.25:0,1,3	1/1:8,17:29:17.83:422,18,0	1/1:6,11:17:24.07:289,24,0	1/1:1,8:7:18.05:212,18,0	1/1:7,0:11:14.35:78,14,0	1/1:4,11:15:30.09:362,30,0	1/1:9,17:26:44.80:498,45,0	1/1:4,11:16:23.91:267,24,0	1/1:4,11:16:20.90:231,21,0	1/1:2,14:16:36.11:434,36,0	1/1:2,5:9:17.72:173,18,0	1/1:6,10:18:32.76:353,33,0	1/1:2,14:16:35.81:412,36,0	1/1:9,16:27:34.82:518,35,0	1/1:7,11:17:26.91:303,27,0	1/1:7,1:16:22.89:134,23,0	1/1:6,0:28:48.33:239,48,0	1/1:3,0:11:11.36:56,11,0	1/1:10,9:21:29.76:317,30,0	1/1:3,9:12:15.05:181,15,0	1/1:3,8:11:24.07:289,24,0	0/0:15,0:15:12.13:0,12,368	0/1:6,12:20:3.40:417,0,3	1/1:1,15:17:44.97:520,45,0	1/1:0,4:4:9.03:108,9,0
chr10	12208751	.	TTCCAATTTGTA	T	1406.61	PASS	AB=0.817;AC=2;AF=0.036;AN=56;BaseQRankSum=6.621;DP=680;FS=39.416;HRun=0;HaplotypeScore=186.7254;InbreedingCoeff=-0.0435;MQ=56.07;MQ0=40;MQRankSum=-6.587;QD=19.81;ReadPosRankSum=0.323;VQSLOD=1.6055;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:36:99:0,102,5086	0/0:12,0:12:36.12:0,36,2062	0/0:20,0:2:6.02:0,6,145	0/0:22,0:7:17.70:0,18,212	0/0:30,0:28:66.23:0,66,3569	0/0:26,0:25:69.24:0,69,3540	0/0:13,0:10:21.07:0,21,956	0/0:26,0:10:9.03:0,9,515	0/0:14,0:13:36.12:0,36,2061	0/0:27,0:24:72.25:0,72,3741	0/0:20,0:19:51.15:0,51,2718	0/0:16,0:14:42.11:0,42,2059	0/0:26,0:26:66.23:0,66,3403	0/0:22,0:22:54.19:0,54,2961	0/0:26,0:26:69.24:0,69,3750	0/0:19,0:18:47.96:0,48,2309	0/0:26,0:26:63.22:0,63,3466	0/0:18,0:18:36.12:0,36,1748	0/0:22,0:14:42.14:0,42,2351	0/1:33,16:44:99:1244,0,4536	0/0:29,0:28:75.26:0,75,3924	0/0:14,0:14:42.14:0,42,2219	0/0:34,0:34:93.32:0,93,4862	0/0:27,0:27:75.24:0,75,4010	0/1:19,3:22:99:251,0,3066	0/0:25,0:24:72.24:0,72,3732	0/0:41,0:41:99:0,117,6311	0/0:16,0:16:48.16:0,48,2223
chr10	12218340	.	G	GA	1651.14	PASS	AC=30;AF=0.682;AN=44;BaseQRankSum=3.055;DP=406;FS=35.874;HRun=7;HaplotypeScore=27.3977;InbreedingCoeff=0.6675;MQ=25.49;MQ0=83;MQRankSum=-5.380;QD=8.88;ReadPosRankSum=3.083;VQSLOD=-0.5331;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:21:6.01:0,6,58	./.	./.	./.	./.	0/0:20,0:16:20.70:0,21,179	0/0:28,0:16:5.99:0,6,56	./.	1/1:6,15:15:17.93:215,18,0	1/1:3,5:2:6.02:72,6,0	1/1:3,5:2:3.01:36,3,0	1/1:1,6:3:6.02:72,6,0	1/1:4,10:9:15.05:181,15,0	1/1:2,13:13:27.08:323,27,0	1/1:3,8:9:18.06:217,18,0	1/1:4,9:5:6.02:72,6,0	1/1:3,8:6:6.02:72,6,0	1/1:7,4:4:3.01:33,3,0	0/0:20,0:9:24.04:0,24,232	0/0:22,0:16:14.99:0,15,136	0/0:17,0:11:15.02:0,15,142	./.	1/1:6,8:7:5.91:53,6,0	1/1:5,8:3:3.01:36,3,0	0/0:17,0:16:5.96:0,6,58	1/1:5,1:3:3.48:36,3,0	1/1:5,19:15:30.09:359,30,0	1/1:1,9:7:3.01:32,3,0
chr10	12219436	.	TG	T	4157.25	PASS	AC=52;AF=1.000;AN=52;BaseQRankSum=1.286;DP=225;FS=0.000;HRun=3;HaplotypeScore=77.1241;InbreedingCoeff=0.1408;MQ=27.37;MQ0=1;MQRankSum=-0.394;QD=18.64;ReadPosRankSum=1.522;VQSLOD=3.2080;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,5:3:6.02:71,6,0	1/1:0,2:2:6.02:70,6,0	./.	./.	1/1:0,9:9:17.36:166,17,0	1/1:1,6:3:6.02:66,6,0	1/1:2,6:6:9.03:106,9,0	1/1:0,2:2:6.02:70,6,0	1/1:1,17:11:33.09:381,33,0	1/1:1,9:9:24.07:273,24,0	1/1:0,10:10:23.90:254,24,0	1/1:1,11:5:15.04:171,15,0	1/1:0,11:7:21.06:242,21,0	1/1:1,9:6:15.04:174,15,0	1/1:0,8:5:15.04:177,15,0	1/1:0,6:3:8.97:89,9,0	1/1:5,12:12:24.07:273,24,0	1/1:2,7:8:15.04:174,15,0	1/1:2,3:5:6.02:71,6,0	1/1:1,6:7:14.38:171,14,0	1/1:3,9:11:14.25:130,14,0	1/1:2,13:15:36.03:384,36,0	1/1:2,7:9:6.80:54,7,0	1/1:1,9:8:15.93:173,16,0	1/1:0,3:3:0.88:2,1,0	1/1:1,7:7:18.05:209,18,0	1/1:2,4:5:9.03:103,9,0	1/1:0,4:3:9.03:104,9,0
chr10	12219452	.	GA	G	5037.77	PASS	AC=52;AF=1.000;AN=52;BaseQRankSum=1.318;DP=260;FS=0.000;HRun=2;HaplotypeScore=80.5929;InbreedingCoeff=-0.0509;MQ=29.38;MQ0=2;MQRankSum=-1.577;QD=19.68;ReadPosRankSum=1.706;VQSLOD=4.7862;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,7:6:15.05:194,15,0	1/1:0,3:3:6.02:78,6,0	./.	./.	1/1:3,9:12:3.07:179,3,0	1/1:1,7:4:2.80:38,3,0	1/1:2,7:8:9.03:116,9,0	1/1:4,1:4:3.01:39,3,0	1/1:0,17:10:30.10:387,30,0	1/1:2,9:10:24.03:290,24,0	1/1:1,10:11:24.08:310,24,0	1/1:0,13:7:18.06:233,18,0	1/1:0,12:8:24.08:310,24,0	1/1:1,8:5:12.04:155,12,0	1/1:0,10:5:15.05:194,15,0	1/1:1,5:3:9.03:117,9,0	1/1:1,13:10:21.01:252,21,0	1/1:0,8:6:15.05:194,15,0	1/1:1,6:6:9.01:100,9,0	1/1:0,7:7:12.04:155,12,0	1/1:3,11:12:9.03:116,9,0	1/1:1,18:18:45.08:555,45,0	1/1:0,9:9:18.06:233,18,0	1/1:1,15:14:11.94:134,12,0	1/1:1,2:3:3.01:39,3,0	1/1:0,14:11:30.10:387,30,0	1/1:0,8:6:9.03:116,9,0	1/1:0,4:3:9.03:116,9,0
chr10	12221479	.	C	CCTTTGT	7467.17	PASS	AB=0.833;AC=8;AF=0.143;AN=56;BaseQRankSum=13.337;DP=819;FS=11.016;HRun=0;HaplotypeScore=211.1106;InbreedingCoeff=-0.1668;MQ=65.30;MQ0=1;MQRankSum=-13.843;QD=19.40;ReadPosRankSum=-0.036;VQSLOD=3.4625;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:34,34:68:99:2985,0,2215	0/0:8,0:8:24.07:0,24,558	0/0:19,0:19:51.14:0,51,1227	0/0:22,0:22:61.05:0,61,1380	0/0:29,0:29:84.26:0,84,2147	0/1:44,16:61:99:1655,0,2626	0/1:28,5:33:99:468,0,1632	0/1:45,9:51:99:606,0,2661	0/0:32,0:32:93.32:0,93,2319	0/0:31,0:31:87.29:0,87,2121	0/0:18,0:18:51.18:0,51,1296	0/0:16,0:16:48.15:0,48,1173	0/0:22,0:22:63.20:0,63,1561	0/0:20,0:20:60.19:0,60,1451	0/0:17,0:17:51.16:0,51,1248	0/0:18,0:18:54.17:0,54,1332	0/0:32,0:32:93.22:0,93,2266	0/0:17,0:17:48.16:0,48,1230	0/1:37,9:44:99:838,0,1968	0/1:50,11:58:99:842,0,2642	0/1:33,4:37:30.32:30,0,2075	0/0:23,0:23:69.21:0,69,1659	0/0:20,0:20:54.18:0,54,1356	0/0:18,0:18:54.15:0,54,1247	0/1:22,3:24:42.40:42,0,1548	0/0:27,0:27:81.27:0,81,2004	0/0:36,0:35:99:0,108,2733	0/0:9,0:8:24.08:0,24,615
chr10	12221508	.	TCC	T	4782.18	PASS	AB=0.796;AC=10;AF=0.179;AN=56;BaseQRankSum=15.390;DP=927;FS=1.062;HRun=3;HaplotypeScore=174.9565;InbreedingCoeff=-0.2198;MQ=61.75;MQ0=0;MQRankSum=-13.152;QD=8.81;ReadPosRankSum=-2.132;VQSLOD=0.7145;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:40,34:74:99:1092,0,1446	0/0:4,0:4:12.04:0,12,222	0/1:20,8:27:99:299,0,666	0/1:27,7:32:99:258,0,999	0/0:30,0:29:81.21:0,81,1452	0/1:49,22:71:99:796,0,2296	0/1:31,5:36:69.73:70,0,1405	0/1:46,21:66:99:619,0,2136	0/0:32,0:32:90.29:0,90,1697	0/0:32,0:32:93.31:0,93,1754	0/0:22,0:22:66.23:0,66,1274	0/0:15,0:15:45.15:0,45,849	0/0:25,0:25:72.25:0,72,1371	0/0:18,0:18:51.17:0,51,978	0/0:17,0:17:51.17:0,51,984	0/0:13,0:13:39.13:0,39,746	0/0:34,0:34:99:0,102,1853	0/0:15,0:15:45.15:0,45,869	0/1:52,20:71:99:696,0,2232	0/1:65,24:82:99:754,0,2525	0/1:33,5:38:99:102,0,1617	0/0:25,0:25:75.26:0,75,1426	0/0:19,0:19:57.17:0,57,1034	0/0:13,0:13:39.10:0,39,715	0/1:26,7:31:95.69:96,0,1321	0/0:29,0:29:87.24:0,87,1554	0/0:35,0:34:99:0,99,1863	0/0:6,0:5:15.05:0,15,290
chr10	12221606	.	T	TG	17395.94	PASS	AB=0.631;AC=10;AF=0.179;AN=56;BaseQRankSum=24.860;DP=1074;FS=3.150;HRun=0;HaplotypeScore=176.0208;InbreedingCoeff=-0.2174;MQ=79.30;MQ0=1;MQRankSum=-9.960;QD=25.07;ReadPosRankSum=-2.088;VQSLOD=4.0482;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:24,54:78:99:2075,0,743	0/0:11,0:11:33.08:0,33,441	0/1:31,21:51:99:602,0,937	0/1:36,14:48:99:686,0,676	0/0:24,0:24:66.20:0,66,905	0/1:32,42:73:99:1503,0,1094	0/1:17,26:43:99:1114,0,566	0/1:37,50:87:99:2046,0,1143	0/0:37,0:37:99:0,111,1535	0/0:29,0:29:84.28:0,84,1174	0/0:20,0:20:60.20:0,60,839	0/0:13,0:13:39.12:0,39,528	0/0:18,0:18:54.18:0,54,755	0/0:15,0:15:45.15:0,45,629	0/0:25,0:25:72.23:0,72,992	0/0:17,0:17:51.17:0,51,712	0/0:19,0:19:51.17:0,51,712	0/0:17,0:17:51.17:0,51,713	0/1:18,50:67:99:2133,0,515	0/1:36,93:131:99:4228,0,791	0/1:12,40:52:99:1720,0,253	0/0:26,0:26:78.26:0,78,1091	0/0:27,0:27:78.26:0,78,1090	0/0:16,0:16:45.14:0,45,614	0/1:21,35:56:99:1289,0,686	0/0:18,0:18:54.15:0,54,721	0/0:38,0:36:99:0,111,1534	0/0:10,0:10:30.03:0,30,396
chr10	12221742	.	AT	A	2387.58	PASS	AB=0.750;AC=4;AF=0.071;AN=56;BaseQRankSum=11.451;DP=972;FS=3.969;HRun=5;HaplotypeScore=160.6725;InbreedingCoeff=-0.0771;MQ=61.67;MQ0=0;MQRankSum=-6.343;QD=7.56;ReadPosRankSum=-2.129;VQSLOD=-0.3394;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:71,0:71:99:0,178,2391	0/0:8,0:8:24.08:0,24,328	0/0:24,0:23:37.23:0,37,653	0/0:28,0:27:63.26:0,63,783	0/0:35,0:35:99:0,99,1335	0/0:56,1:57:99:0,104,1784	0/0:42,0:42:99:0,111,1491	0/1:77,22:99:99:419,0,2579	0/0:22,0:22:66.21:0,66,887	0/0:29,0:29:81.26:0,81,1096	0/0:24,0:23:66.20:0,66,870	0/0:11,0:11:30.10:0,30,410	0/0:21,0:21:60.12:0,60,753	0/0:17,0:17:48.14:0,48,626	0/0:21,0:21:60.17:0,60,788	0/0:18,0:18:48.16:0,48,655	0/0:18,0:18:42.06:0,42,522	0/0:14,0:14:42.14:0,42,573	0/1:33,34:65:99:873,0,796	0/1:66,37:103:99:976,0,1711	0/1:34,13:47:99:229,0,1066	0/0:20,0:20:57.18:0,57,758	0/0:21,0:21:54.15:0,54,695	0/0:9,0:9:27.09:0,27,369	0/0:45,0:45:99:0,123,1596	0/0:32,0:32:90.29:0,90,1214	0/0:34,0:33:90.28:0,90,1211	0/0:35,0:34:99:0,102,1394
chr10	12222017	.	C	CT	8632.86	PASS	AB=1.000;AC=45;AF=0.804;AN=56;BaseQRankSum=2.108;DP=517;FS=32.705;HRun=8;HaplotypeScore=82.6498;InbreedingCoeff=0.8418;MQ=67.99;MQ0=0;MQRankSum=-3.192;QD=20.85;ReadPosRankSum=1.778;VQSLOD=3.1876;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:66.02:0,66,603	1/1:0,6:6:18.05:206,18,0	0/0:28,0:22:24.13:0,24,166	0/1:42,0:26:59.82:60,0,69	1/1:6,14:20:51.61:574,52,0	0/0:14,0:14:30:0,30,269	0/0:3,0:3:6:0,6,55	1/1:13,22:35:66.18:749,66,0	1/1:1,11:12:27.08:308,27,0	1/1:6,16:22:54.15:604,54,0	1/1:6,10:15:33.10:380,33,0	1/1:3,5:8:24.06:268,24,0	1/1:1,4:5:15.04:172,15,0	1/1:3,7:10:26.93:281,27,0	1/1:1,13:14:33.10:378,33,0	1/1:4,3:7:12.92:138,13,0	1/1:3,8:11:24.07:273,24,0	1/1:5,4:9:15.04:173,15,0	1/1:12,12:24:36.58:416,37,0	1/1:35,16:51:54.16:623,54,0	1/1:9,4:13:18.02:194,18,0	1/1:7,3:10:15.04:164,15,0	1/1:6,14:20:39.02:443,39,0	1/1:5,4:8:21.04:228,21,0	0/0:31,0:31:45.01:0,45,412	1/1:6,15:21:51.15:585,51,0	1/1:11,23:34:84.21:934,84,0	1/1:0,14:14:42.12:480,42,0
chr10	12222018	.	TTTTTTTTC	T	1260.73	PASS	AB=0.995;AC=20;AF=0.357;AN=56;BaseQRankSum=-6.161;DP=512;FS=2.039;HRun=0;HaplotypeScore=171.7779;InbreedingCoeff=-0.4148;MQ=69.01;MQ0=0;MQRankSum=-4.555;QD=3.88;ReadPosRankSum=-4.634;VQSLOD=1.0761;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:69.21:0,69,2376	0/1:6,0:6:9.36:9,0,303	0/0:28,0:21:30.79:0,31,419	0/1:44,0:27:36.51:37,0,196	0/1:20,0:20:56.33:56,0,968	0/0:14,0:14:30.10:0,30,1134	0/0:3,0:3:6.01:0,6,146	0/1:33,0:33:99:138,0,820	0/1:12,0:12:62.98:63,0,411	0/1:22,0:22:1.51:2,0,1076	0/0:16,0:15:1.57:0,2,784	0/1:8,0:8:26.25:26,0,447	0/0:5,0:5:5.87:0,6,312	0/1:10,0:10:59.32:59,0,456	0/1:14,0:14:99:115,0,369	0/1:6,0:6:71.31:71,0,106	0/1:11,0:11:99:151,0,294	0/1:8,0:8:19.14:19,0,305	0/1:23,0:23:74.41:74,0,511	0/0:50,0:50:45.01:0,45,1576	0/1:14,0:14:13.42:13,0,527	1/1:7,3:10:14.78:166,15,0	0/1:20,0:20:71.83:72,0,627	0/1:9,0:8:99:119,0,219	0/0:31,0:31:45.14:0,45,1854	0/1:19,2:21:88.79:89,0,970	0/1:34,0:34:99:140,0,1498	0/0:14,0:14:42.14:0,42,1109
chr10	12222026	.	C	CT	6021.33	PASS	AB=0.955;AC=37;AF=0.661;AN=56;BaseQRankSum=2.450;DP=421;FS=37.390;HRun=8;HaplotypeScore=75.0899;InbreedingCoeff=0.8781;MQ=67.87;MQ0=4;MQRankSum=0.140;QD=23.07;ReadPosRankSum=2.669;VQSLOD=2.9233;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:57.02:0,57,521	1/1:1,5:6:16.29:174,16,0	0/0:37,0:17:28.38:0,28,218	0/1:38,2:18:23.98:57,0,24	1/1:2,18:20:48.13:542,48,0	0/0:12,0:12:30.01:0,30,274	0/0:3,0:3:6:0,6,55	0/0:23,0:23:45.89:0,46,276	1/1:4,8:12:31.32:334,31,0	1/1:2,16:18:48.14:551,48,0	1/1:1,13:13:33.10:378,33,0	1/1:2,6:8:21.06:242,21,0	1/1:1,4:5:12.03:138,12,0	1/1:4,5:9:25.27:250,25,0	1/1:6,7:13:29.55:301,30,0	1/1:1,4:5:12.03:134,12,0	1/1:1,10:11:21.06:234,21,0	1/1:3,4:7:15.04:172,15,0	0/0:15,0:14:25.83:0,26,169	0/0:21,0:21:57.99:0,58,342	0/0:8,0:8:19.73:0,20,121	1/1:3,3:6:9.02:95,9,0	1/1:5,9:14:24.87:302,25,0	1/1:3,4:7:18.05:201,18,0	0/0:15,0:15:45.02:0,45,412	1/1:3,15:18:48.14:551,48,0	1/1:4,27:31:78.22:886,78,0	1/1:0,14:14:42.12:480,42,0
chr10	12231543	.	GA	G	1140.87	PASS	AB=0.765;AC=4;AF=0.071;AN=56;BaseQRankSum=8.812;DP=679;FS=11.604;HRun=2;HaplotypeScore=86.3195;InbreedingCoeff=-0.0777;MQ=54.49;MQ0=6;MQRankSum=-7.293;QD=7.27;ReadPosRankSum=-1.389;VQSLOD=-0.5799;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:60.20:0,60,958	0/0:6,0:6:18.06:0,18,288	0/0:38,0:21:63.21:0,63,1005	0/0:28,0:14:36.11:0,36,528	0/0:27,0:27:81.28:0,81,1286	0/0:47,0:47:99:0,129,2058	0/0:22,0:20:57.19:0,57,911	0/1:34,19:49:99:487,0,1368	0/0:19,0:19:57.18:0,57,888	0/0:30,0:29:87.30:0,87,1392	0/0:22,0:22:66.21:0,66,1032	0/0:11,0:11:33.11:0,33,528	0/0:17,0:17:51.16:0,51,792	0/0:8,0:8:24.07:0,24,359	0/0:7,0:7:21.07:0,21,334	0/0:14,0:14:42.14:0,42,669	0/0:25,0:25:75.26:0,75,1191	0/0:17,0:17:51.17:0,51,814	0/1:17,9:25:99:252,0,514	0/1:34,18:44:99:379,0,1261	0/1:21,5:26:99:132,0,811	0/0:28,0:28:84.29:0,84,1343	0/0:22,0:22:66.23:0,66,1053	0/0:7,0:7:21.07:0,21,335	0/0:28,0:28:69.24:0,69,1099	0/0:24,0:24:72.25:0,72,1151	0/0:28,0:28:81.28:0,81,1284	0/0:18,0:18:54.18:0,54,863
chr10	12236216	.	AG	A	535.99	PASS	AB=0.833;AC=5;AF=0.089;AN=56;BaseQRankSum=6.592;DP=525;FS=6.638;HRun=1;HaplotypeScore=43.4804;InbreedingCoeff=-0.1026;MQ=57.23;MQ0=34;MQRankSum=-7.523;QD=3.53;ReadPosRankSum=0.080;VQSLOD=-0.1962;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:66.14:0,66,916	0/0:8,0:8:24.08:0,24,343	0/0:13,0:4:11.89:0,12,124	0/0:7,0:2:6.02:0,6,86	0/0:25,0:24:72.22:0,72,1010	0/1:14,1:13:18.62:19,0,432	0/0:10,1:10:30.09:0,30,409	0/1:30,21:38:99:555,0,784	0/0:14,0:14:42.11:0,42,562	0/0:32,0:31:93.22:0,93,1230	0/0:28,0:28:81.22:0,81,1102	0/0:10,0:10:30.10:0,30,428	0/0:3,0:3:9.03:0,9,129	0/0:9,0:9:27.05:0,27,331	0/0:16,0:14:48.15:0,48,666	0/0:22,0:22:66.17:0,66,873	0/0:18,0:18:48.12:0,48,685	0/0:17,0:17:45.15:0,45,643	0/1:26,8:22:17.46:17,0,756	0/1:36,4:39:7.49:7,0,1371	0/1:9,3:11:50.59:51,0,351	0/0:13,0:13:39.13:0,39,557	0/0:19,0:19:57.15:0,57,759	0/0:6,0:6:18.04:0,18,237	0/0:21,0:21:63.18:0,63,865	0/0:20,0:20:60.19:0,60,841	0/0:25,0:25:75.25:0,75,1068	0/0:13,0:13:36.08:0,36,475
chr10	12239972	.	ATGGACCCCACTTG	A	28036.71	PASS	AB=0.556;AC=35;AF=0.648;AN=54;BaseQRankSum=18.385;DP=663;FS=5.151;HRun=0;HaplotypeScore=246.8182;InbreedingCoeff=0.8548;MQ=47.37;MQ0=18;MQRankSum=-16.481;QD=77.88;ReadPosRankSum=3.242;VQSLOD=4.0992;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:84.29:0,84,5038	1/1:0,6:5:12.04:484,12,0	./.	0/0:15,0:2:3.01:0,3,35	1/1:2,21:22:33.11:1180,33,0	0/0:22,0:22:60.19:0,60,3658	0/0:21,0:21:57.20:0,57,3711	0/0:37,0:35:93.30:0,93,4489	1/1:5,21:26:54.19:2034,54,0	1/1:1,22:23:66.21:2325,66,0	1/1:5,19:23:42.14:1421,42,0	1/1:1,20:21:57.20:2250,57,0	1/1:2,27:29:75.26:2975,75,0	1/1:3,21:24:54.19:2079,54,0	1/1:2,21:23:57.20:1947,57,0	1/1:2,15:17:42.14:1550,42,0	1/1:10,12:22:21.07:746,21,0	1/1:4,6:10:12.04:484,12,0	0/0:34,0:29:84.27:0,84,5064	0/0:38,0:37:99:0,99,6069	0/0:66,0:66:99:0,148,8649	1/1:2,19:20:39.13:1417,39,0	1/1:2,17:19:31.05:1105,31,0	0/1:3,12:15:99:419,0,183	0/0:21,0:21:54.19:0,54,3445	1/1:4,23:27:69.24:2694,69,0	1/1:1,28:29:72.25:2804,72,0	1/1:0,1:1:3.01:121,3,0
chr10	12240288	.	AACACACAC	A	233.87	PASS	AB=0.936;AC=14;AF=0.318;AN=44;BaseQRankSum=1.545;DP=483;FS=3.187;HRun=0;HaplotypeScore=113.6986;InbreedingCoeff=0.2173;MQ=46.25;MQ0=21;MQRankSum=-1.151;QD=1.34;ReadPosRankSum=1.060;VQSLOD=2.3046;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:29:26.63:0,27,373	0/0:4,0:3:0:0,0,0	./.	./.	0/1:17,0:17:18.83:19,0,31	0/1:18,4:21:64.83:65,0,94	0/0:22,0:20:2.99:0,3,25	0/0:30,0:24:0:0,0,0	./.	0/0:8,0:8:0.47:0,0,1	0/1:11,0:11:0:0,0,0	0/0:15,0:13:8.61:0,9,53	0/0:11,0:11:1.28:0,1,51	1/1:12,0:11:2.01:8,2,0	0/1:7,2:9:11.61:121,0,12	1/1:6,2:8:5.95:42,6,0	1/1:24,0:22:2.42:71,2,0	0/0:15,0:14:5.28:0,5,31	./.	0/1:12,0:11:0:0,0,0	0/1:40,0:34:0.07:8,0,0	0/0:11,0:14:2.92:0,3,18	0/0:12,0:9:0:0,0,0	./.	0/0:10,0:14:18.04:0,18,329	1/1:19,0:19:2.79:9,3,0	./.	0/0:1,0:1:0:0,0,0
chr10	12243158	.	TA	T	10836.73	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=13.187;DP=618;FS=8.570;HRun=5;HaplotypeScore=61.0890;InbreedingCoeff=0.9767;MQ=59.50;MQ0=3;MQRankSum=3.274;QD=27.37;ReadPosRankSum=4.181;VQSLOD=4.5888;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:46:99:0,129,1731	1/1:0,3:3:9.03:102,9,0	0/0:10,0:8:21.05:0,21,264	0/0:16,0:10:27.01:0,27,331	1/1:0,30:30:77.82:870,78,0	0/0:22,0:22:54.18:0,54,738	0/0:10,0:10:30.09:0,30,396	0/0:34,0:33:84.26:0,84,1130	1/1:0,26:26:66.19:749,66,0	1/1:3,27:30:81.21:908,81,0	1/1:1,25:26:69.19:781,69,0	1/1:1,25:26:51.13:578,51,0	1/1:1,22:23:57.16:646,57,0	1/1:0,19:19:42.12:476,42,0	1/1:1,24:25:63.18:715,63,0	1/1:3,20:23:54.58:613,55,0	1/1:3,19:22:45.13:510,45,0	1/1:1,15:16:7.18:469,7,0	0/0:26,0:24:72.23:0,72,967	0/0:27,0:27:81.26:0,81,1091	0/0:11,0:11:33.11:0,33,451	1/1:3,23:26:60.17:680,60,0	1/1:4,18:22:48.14:544,48,0	1/1:1,10:11:18.05:204,18,0	0/0:19,0:19:42.14:0,42,574	1/1:2,23:25:69.20:782,69,0	1/1:2,32:34:81.15:901,81,0	1/1:0,9:9:27.08:306,27,0
chr10	12243630	.	GA	G	9141.44	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=12.962;DP=624;FS=8.894;HRun=9;HaplotypeScore=75.5084;InbreedingCoeff=0.9994;MQ=69.47;MQ0=0;MQRankSum=-2.667;QD=24.51;ReadPosRankSum=5.633;VQSLOD=4.9714;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,138,1556	1/1:0,12:12:36.02:329,36,0	0/0:17,1:16:27:0,27,294	0/0:27,1:28:29.72:0,30,578	1/1:1,17:18:42.01:384,42,0	0/0:25,0:25:72.19:0,72,806	0/0:20,0:20:51.15:0,51,589	0/0:30,0:30:75.20:0,75,849	1/1:3,24:27:69.01:632,69,0	1/1:0,26:26:78.04:714,78,0	1/1:2,20:22:57.02:522,57,0	1/1:1,20:21:54.03:494,54,0	1/1:1,23:24:66.03:604,66,0	1/1:2,14:16:42.02:384,42,0	1/1:0,21:21:63.03:577,63,0	1/1:0,25:25:75.04:687,75,0	1/1:3,27:30:78.04:713,78,0	1/1:1,19:20:51.03:467,51,0	0/0:11,0:10:33.08:0,33,371	0/0:31,0:31:84.20:0,84,939	0/0:27,0:26:75.22:0,75,866	1/1:1,18:19:51.03:467,51,0	1/1:1,14:15:35.92:328,36,0	1/1:2,20:22:51.03:467,51,0	0/0:11,0:11:24.07:0,24,277	1/1:1,17:18:51.03:467,51,0	1/1:1,20:21:51.02:467,51,0	1/1:0,16:16:48.03:439,48,0
chr10	12244768	.	TAA	T	3801.16	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=1.009;DP=479;FS=7.913;HRun=12;HaplotypeScore=81.5900;InbreedingCoeff=0.8005;MQ=60.63;MQ0=26;MQRankSum=-1.296;QD=9.18;ReadPosRankSum=1.107;VQSLOD=1.5484;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:39.13:0,39,581	1/1:1,7:8:12.02:122,12,0	0/0:17,0:13:19.16:0,19,195	0/0:22,0:21:30.87:0,31,429	1/1:3,25:26:29.77:286,30,0	1/1:3,24:23:27:274,27,0	1/1:5,8:10:6.15:114,6,0	1/1:6,0:22:30.40:95,30,0	1/1:3,10:12:8.94:92,9,0	1/1:2,17:14:36.07:366,36,0	1/1:3,18:18:8.96:92,9,0	1/1:0,14:11:11.76:104,12,0	1/1:4,14:13:18.02:183,18,0	1/1:2,10:11:18.03:182,18,0	1/1:2,15:12:15.02:152,15,0	1/1:3,11:10:12.48:116,12,0	1/1:0,6:6:15.03:152,15,0	1/1:1,7:8:15.03:153,15,0	1/1:2,0:11:19.33:67,19,0	1/1:7,0:27:0.70:50,1,0	1/1:2,0:14:19.93:61,20,0	1/1:2,21:21:20.95:213,21,0	1/1:0,22:21:23.25:243,23,0	1/1:3,8:11:9:92,9,0	0/0:8,0:9:17.37:0,17,232	1/1:2,14:14:36.03:350,36,0	1/1:3,26:25:18.03:183,18,0	1/1:5,7:8:6.01:61,6,0
chr10	12245357	.	CA	C	244.70	PASS	AB=0.709;AC=1;AF=0.018;AN=56;BaseQRankSum=5.186;DP=656;FS=29.679;HRun=6;HaplotypeScore=66.5593;InbreedingCoeff=-0.0203;MQ=51.61;MQ0=19;MQRankSum=-5.453;QD=6.27;ReadPosRankSum=0.394;VQSLOD=-0.4703;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:71.90:0,72,919	0/0:13,0:13:36.12:0,36,473	0/0:29,0:24:66.20:0,66,836	0/0:30,0:22:48.16:0,48,627	0/0:22,0:22:45.13:0,45,577	0/0:27,0:25:63.20:0,63,826	0/0:25,0:25:75.22:0,75,964	0/0:25,0:23:69.21:0,69,891	0/0:25,0:25:60.15:0,60,770	0/0:22,0:22:66.17:0,66,824	0/0:14,0:14:39.11:0,39,498	0/0:22,0:22:60.15:0,60,770	0/0:23,0:23:54.14:0,54,692	0/0:17,0:17:36.12:0,36,474	0/0:26,0:25:66.21:0,66,868	0/0:20,0:20:54.13:0,54,691	0/0:14,0:12:33.11:0,33,434	0/0:26,0:21:63.20:0,63,829	0/0:20,0:18:54.15:0,54,681	0/1:23,16:37:99:319,0,665	0/0:29,0:27:78.19:0,78,990	0/0:28,0:28:57.19:0,57,750	0/0:16,0:16:45.10:0,45,572	0/0:28,0:27:54.18:0,54,710	0/0:23,0:23:57.17:0,57,750	0/0:27,0:26:66.21:0,66,869	0/0:25,0:24:66.15:0,66,830	0/0:5,0:4:9:0,9,100
chr10	12246778	.	GCT	G	1222.65	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-0.218;DP=568;FS=0.673;HRun=0;HaplotypeScore=89.0071;InbreedingCoeff=0.9438;MQ=58.25;MQ0=8;MQRankSum=0.282;QD=26.58;ReadPosRankSum=1.390;VQSLOD=4.7478;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:57.17:0,57,977	0/0:2,0:2:6.02:0,6,108	0/0:22,0:12:34:0,34,535	0/0:17,0:10:20.63:0,21,369	0/0:25,0:25:54.18:0,54,928	1/1:1,28:27:63.21:882,63,0	1/1:2,15:13:33.11:462,33,0	0/0:35,0:34:93.31:0,93,1530	0/0:19,0:19:54.18:0,54,952	0/0:30,0:29:84.27:0,84,1375	0/0:18,0:18:36.12:0,36,638	0/0:21,0:21:54.17:0,54,916	0/0:16,0:16:45.15:0,45,806	0/0:10,0:10:24.08:0,24,423	0/0:21,0:21:60.21:0,60,1054	0/0:12,0:12:36.12:0,36,639	0/0:23,0:23:66.17:0,66,1117	0/0:15,0:15:39.13:0,39,693	0/0:14,0:14:24.64:0,25,439	0/0:21,0:21:60.20:0,60,1027	0/0:22,0:22:66.23:0,66,1165	0/0:26,0:26:66.23:0,66,1167	0/0:28,0:28:75.21:0,75,1287	0/0:10,0:10:27.08:0,27,456	0/0:22,0:22:51.73:0,52,941	0/0:23,0:23:63.20:0,63,1079	0/0:22,0:22:66.23:0,66,1157	0/0:24,0:24:66.18:0,66,1092
chr10	12251930	.	AACACACACACACACACACAC	A	7964.38	PASS	AB=0.823;AC=32;AF=0.640;AN=50;BaseQRankSum=7.327;DP=468;FS=7.600;HRun=0;HaplotypeScore=199.4533;InbreedingCoeff=0.4876;MQ=49.94;MQ0=31;MQRankSum=-6.555;QD=32.64;ReadPosRankSum=2.238;VQSLOD=3.2830;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:31:48.16:0,48,3621	1/1:5,8:13:21.03:860,21,0	./.	./.	1/1:8,10:19:8.57:339,9,0	0/1:11,2:16:19.24:141,0,19	0/0:14,0:11:2.30:0,2,157	0/0:31,0:28:26.66:0,27,850	1/1:8,6:12:9.03:357,9,0	0/1:10,3:13:8.94:357,0,9	1/1:4,6:11:12:499,12,0	1/1:8,7:13:9.03:479,9,0	1/1:7,12:15:21.54:1119,22,0	1/1:2,5:7:6.02:320,6,0	1/1:10,5:11:3.01:160,3,0	1/1:8,2:9:3.01:140,3,0	0/1:14,2:15:8.51:154,0,9	0/1:7,0:8:39.15:172,0,39	0/0:8,0:8:9.01:0,9,434	0/0:14,0:17:15.05:0,15,922	0/0:26,0:25:48.16:0,48,3765	1/1:8,9:17:17.97:679,18,0	1/1:4,7:11:11.99:452,12,0	./.	0/0:6,0:6:9.03:0,9,581	1/1:8,4:11:12.01:421,12,0	1/1:9,7:15:21.07:1117,21,0	1/1:1,0:3:6.02:199,6,0
chr10	12255222	.	T	TTAC	3112.74	PASS	AB=0.932;AC=41;AF=0.854;AN=48;BaseQRankSum=1.362;DP=354;FS=10.448;HRun=0;HaplotypeScore=61.6631;InbreedingCoeff=0.2916;MQ=64.13;MQ0=12;MQRankSum=0.844;QD=12.21;ReadPosRankSum=-0.654;VQSLOD=1.3867;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:23:34.66:0,35,433	1/1:3,0:3:2.98:22,3,0	./.	./.	1/1:13,0:14:3.01:58,3,0	1/1:19,0:20:22.26:324,22,0	1/1:6,0:14:6.02:84,6,0	./.	0/1:14,1:15:7.86:380,0,8	1/1:9,4:13:11.90:148,12,0	1/1:8,6:14:8.24:110,8,0	0/1:5,0:5:13.88:91,0,14	1/1:13,0:13:8.81:131,9,0	1/1:11,1:12:20.07:270,20,0	1/1:4,5:9:2.92:17,3,0	1/1:4,0:4:3.01:48,3,0	1/1:12,0:11:12.02:174,12,0	1/1:10,0:10:6.07:57,6,0	1/1:11,5:16:15.05:242,15,0	1/1:8,7:15:17.88:192,18,0	0/1:5,1:6:33.29:52,0,33	1/1:10,1:11:12.02:161,12,0	./.	1/1:12,0:12:8.99:119,9,0	0/0:17,0:17:27.07:0,27,343	1/1:8,5:13:15.05:253,15,0	1/1:15,0:15:12.02:177,12,0	1/1:7,1:8:9.49:141,9,0
chr10	12255272	.	G	GCCA	3003.72	PASS	AB=0.795;AC=34;AF=0.607;AN=56;BaseQRankSum=1.459;DP=313;FS=4.120;HRun=0;HaplotypeScore=64.5249;InbreedingCoeff=0.7377;MQ=56.01;MQ0=8;MQRankSum=0.694;QD=18.43;ReadPosRankSum=0.919;VQSLOD=2.9948;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:38.93:0,39,420	1/1:7,0:7:15.02:200,15,0	0/0:20,0:13:17.86:0,18,165	0/0:18,0:10:17.28:0,17,117	1/1:3,7:10:17.92:204,18,0	0/0:9,0:9:12.04:0,12,156	0/0:13,0:13:29.98:0,30,358	0/0:20,0:18:23.90:0,24,221	1/1:4,10:14:8.98:145,9,0	0/1:6,0:6:9.71:80,0,10	1/1:9,1:10:12.49:162,12,0	1/1:7,0:7:17.98:246,18,0	1/1:10,2:12:8.82:118,9,0	1/1:8,1:9:15.51:227,16,0	1/1:10,0:10:14.95:219,15,0	1/1:3,0:3:3:25,3,0	1/1:13,0:12:30.90:437,31,0	1/1:2,5:8:2.62:60,3,0	0/0:12,0:11:11.96:0,12,111	0/0:13,0:12:14.74:0,15,147	0/0:10,0:10:23.49:0,23,234	1/1:3,2:5:9.42:125,9,0	1/1:8,0:8:12:125,12,0	1/1:6,1:7:18.53:332,19,0	0/0:14,0:14:23.98:0,24,301	1/1:13,0:12:19.57:229,20,0	0/1:4,8:13:23.18:23,0,65	1/1:7,1:8:6.33:256,6,0
chr10	12255343	.	A	AT	708.90	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-4.863;DP=373;FS=24.375;HRun=8;HaplotypeScore=41.7272;InbreedingCoeff=0.9292;MQ=75.26;MQ0=0;MQRankSum=-2.652;QD=22.15;ReadPosRankSum=0.266;VQSLOD=1.9007;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:69.04:0,69,631	0/0:7,0:7:14.99:0,15,135	0/0:9,0:9:20.12:0,20,168	0/0:8,0:8:8.22:0,8,104	0/0:16,0:16:42.01:0,42,384	1/1:2,15:17:39.12:449,39,0	1/1:2,13:15:33.10:381,33,0	0/0:21,0:21:51.02:0,51,467	0/0:13,0:13:20.98:0,21,192	0/0:11,0:11:27.01:0,27,247	0/0:12,0:12:36.02:0,36,329	0/0:15,0:15:45.02:0,45,412	0/0:11,0:11:30.02:0,30,275	0/0:11,0:11:27.01:0,27,247	0/0:8,0:8:21:0,21,188	0/0:7,0:7:21.01:0,21,192	0/0:20,0:20:51:0,51,462	0/0:7,0:7:11.94:0,12,102	0/0:18,0:18:51.02:0,51,463	0/0:20,0:20:51.01:0,51,466	0/0:21,0:21:57.02:0,57,521	0/0:7,0:7:21.01:0,21,192	0/0:18,0:18:51.01:0,51,461	0/0:8,0:8:21.01:0,21,192	0/0:11,0:11:33.02:0,33,302	0/0:10,0:10:27.01:0,27,247	0/0:18,0:18:39.01:0,39,357	0/0:11,0:11:32.98:0,33,290
chr10	12255621	.	AC	A	11122.69	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=14.500;DP=497;FS=0.691;HRun=1;HaplotypeScore=52.8794;InbreedingCoeff=0.9885;MQ=71.94;MQ0=0;MQRankSum=-1.380;QD=39.44;ReadPosRankSum=4.232;VQSLOD=5.2084;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,129,2021	1/1:0,9:9:24.08:336,24,0	0/0:15,0:15:38:0,38,542	0/0:6,0:6:14.97:0,15,181	1/1:0,20:20:57.19:797,57,0	0/0:20,0:20:60.20:0,60,955	0/0:16,0:16:48.16:0,48,760	0/0:24,0:24:72.23:0,72,1107	1/1:0,19:19:57.19:797,57,0	1/1:0,19:19:57.17:764,57,0	1/1:0,17:17:51.08:668,51,0	1/1:0,15:15:39.13:546,39,0	1/1:0,14:14:33.11:462,33,0	1/1:0,17:17:48.16:671,48,0	1/1:0,21:21:60.20:839,60,0	1/1:0,12:12:36.12:504,36,0	1/1:0,21:21:60.20:839,60,0	1/1:0,3:3:9.03:126,9,0	0/0:16,0:16:48.16:0,48,764	0/0:26,0:26:75.24:0,75,1171	0/0:20,0:20:60.16:0,60,931	1/1:0,10:10:30.10:419,30,0	1/1:0,26:26:75.25:1049,75,0	1/1:0,14:14:36.12:503,36,0	0/0:29,0:29:87.30:0,87,1391	1/1:0,14:14:42.14:586,42,0	1/1:0,19:19:51.17:713,51,0	1/1:0,12:12:36.12:504,36,0
chr10	12256441	.	T	TC	2580.49	PASS	AB=0.739;AC=31;AF=0.554;AN=56;BaseQRankSum=-3.652;DP=445;FS=1.663;HRun=10;HaplotypeScore=65.3504;InbreedingCoeff=-0.1411;MQ=71.97;MQ0=3;MQRankSum=-3.024;QD=7.66;ReadPosRankSum=-2.688;VQSLOD=1.4494;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:33:61.84:0,62,490	0/1:4,1:5:12.55:79,0,13	0/0:26,0:19:5.62:0,6,100	0/1:27,0:22:50.77:51,0,91	1/1:10,12:22:21.05:221,21,0	0/0:2,0:18:26.47:0,26,76	0/0:6,0:14:20.84:0,21,75	0/1:11,0:11:9.22:85,0,9	0/1:18,4:22:1.85:344,0,2	1/1:6,7:13:17.70:183,18,0	0/1:10,5:16:28.45:93,0,28	0/1:8,4:12:21.87:155,0,22	0/1:6,8:14:25.19:164,0,25	1/1:4,9:13:2.90:28,3,0	0/1:15,7:22:66.42:287,0,66	1/1:1,5:6:9.02:96,9,0	0/1:6,14:20:12.95:83,0,13	0/1:6,6:12:49.72:136,0,50	1/1:12,2:14:7.12:76,7,0	1/1:5,1:8:3:25,3,0	1/1:5,2:7:2.97:20,3,0	0/1:7,5:12:31.16:108,0,31	1/1:7,7:14:5.66:54,6,0	0/1:5,11:16:71.41:133,0,71	0/0:12,0:16:26.10:0,26,171	0/1:16,4:20:5.13:121,0,5	0/1:6,13:20:14.06:129,0,14	0/1:2,8:10:16.98:82,0,17
chr10	12258827	.	C	CAC	1569.59	PASS	AB=0.973;AC=45;AF=0.900;AN=50;BaseQRankSum=1.331;DP=499;FS=2.446;HRun=0;HaplotypeScore=81.8971;InbreedingCoeff=0.3898;MQ=54.51;MQ0=20;MQRankSum=-1.684;QD=3.87;ReadPosRankSum=-2.179;VQSLOD=1.9506;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:8.84:0,9,71	1/1:5,0:5:3:26,3,0	./.	0/1:35,0:20:0:0,0,0	1/1:20,0:20:15.03:161,15,0	1/1:22,0:22:8.99:75,9,0	1/1:18,0:17:18.01:179,18,0	1/1:25,0:25:13.15:89,13,0	1/1:17,0:16:8.22:59,8,0	1/1:12,0:12:3.01:37,3,0	1/1:17,0:17:3:26,3,0	1/1:10,0:10:3:26,3,0	1/1:14,0:13:6:52,6,0	1/1:8,0:8:3:26,3,0	1/1:8,4:13:2.99:24,3,0	1/1:11,0:11:6:52,6,0	1/1:10,0:10:9.02:107,9,0	1/1:13,0:12:3.46:25,3,0	1/1:18,0:16:13.26:121,13,0	1/1:22,0:21:5.84:90,6,0	1/1:33,0:30:12.01:125,12,0	1/1:10,0:10:5.89:53,6,0	./.	1/1:29,0:29:5.75:52,6,0	0/0:26,0:26:35.43:0,35,320	1/1:18,0:16:15.03:174,15,0	1/1:25,0:25:9.02:108,9,0	./.
chr10	12259044	.	TAAAC	T	1219.83	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.887;DP=467;FS=1.746;HRun=0;HaplotypeScore=73.9217;InbreedingCoeff=0.9371;MQ=61.65;MQ0=0;MQRankSum=-1.248;QD=45.18;ReadPosRankSum=1.407;VQSLOD=3.6313;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:63.22:0,63,1657	0/0:3,0:3:9.03:0,9,246	0/0:15,0:15:40.02:0,40,1008	0/0:10,0:10:27.09:0,27,719	0/0:22,0:22:66.23:0,66,1773	1/1:1,20:21:57.20:1104,57,0	1/1:1,5:6:12.04:232,12,0	0/0:26,0:26:75.25:0,75,1941	0/0:14,0:14:42.14:0,42,1146	0/0:21,0:20:60.21:0,60,1607	0/0:23,0:23:69.24:0,69,1886	0/0:7,0:7:21.07:0,21,573	0/0:16,0:16:48.16:0,48,1314	0/0:10,0:10:30.10:0,30,774	0/0:16,0:15:42.14:0,42,1150	0/0:7,0:7:15.05:0,15,411	0/0:26,0:26:78.26:0,78,2057	0/0:15,0:14:39.13:0,39,979	0/0:17,0:17:48.16:0,48,1285	0/0:39,0:39:99:0,111,2936	0/0:7,0:7:21.07:0,21,575	0/0:11,0:11:27.09:0,27,707	0/0:27,0:27:81.26:0,81,2108	0/0:8,0:8:24.08:0,24,580	0/0:23,0:23:63.22:0,63,1687	0/0:20,0:20:54.18:0,54,1423	0/0:29,0:29:81.12:0,81,2171	0/0:6,0:6:18.06:0,18,425
chr10	12259247	.	G	GAA	6978.31	PASS	AB=0.591;AC=39;AF=0.696;AN=56;BaseQRankSum=3.213;DP=553;FS=1.375;HRun=9;HaplotypeScore=83.2532;InbreedingCoeff=0.8910;MQ=52.48;MQ0=22;MQRankSum=-2.325;QD=25.10;ReadPosRankSum=1.737;VQSLOD=4.6899;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:39:99:0,105,1083	1/1:2,4:7:15.01:198,15,0	0/0:73,0:10:19.65:0,20,183	0/0:69,0:9:14.33:0,14,135	1/1:6,11:19:39.52:522,40,0	1/1:3,0:17:24.95:86,25,0	0/1:4,0:12:36.60:37,0,40	0/0:18,0:18:50.95:0,51,526	1/1:2,14:17:42.14:644,42,0	1/1:2,9:10:24.08:367,24,0	1/1:9,10:23:42.06:555,42,0	1/1:2,7:11:21.06:285,21,0	1/1:3,5:9:21.50:281,21,0	1/1:2,10:12:24.08:368,24,0	1/1:4,7:11:18.47:229,18,0	1/1:2,4:7:12.02:162,12,0	1/1:3,16:21:48.11:687,48,0	1/1:4,8:12:17.68:247,18,0	0/0:21,0:21:44.91:0,45,470	0/0:21,0:21:54.10:0,54,549	0/0:18,0:15:39.09:0,39,411	1/1:2,6:10:18:217,18,0	1/1:3,9:12:17.97:224,18,0	1/1:2,5:7:18.01:249,18,0	0/0:14,0:14:39.07:0,39,406	1/1:5,17:24:60.10:811,60,0	1/1:5,18:24:46.02:669,46,0	1/1:5,2:9:11.99:140,12,0
chr10	12259261	.	C	CA	2017.15	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-10.478;DP=607;FS=2.959;HRun=8;HaplotypeScore=94.5622;InbreedingCoeff=0.9685;MQ=57.79;MQ0=24;MQRankSum=4.349;QD=24.01;ReadPosRankSum=-1.124;VQSLOD=3.5034;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,111,995	0/0:6,0:6:17.90:0,18,140	0/0:92,0:17:22.54:0,23,178	0/0:94,0:19:16.73:0,17,191	0/0:20,0:20:54.85:0,55,411	0/0:17,0:17:33.37:0,33,199	0/0:15,0:15:33.01:0,33,229	1/1:5,16:22:50.96:533,51,0	0/0:16,0:16:41.95:0,42,355	0/0:11,0:10:23.86:0,24,193	0/0:21,0:21:50.32:0,50,394	0/0:10,0:10:26.86:0,27,206	0/0:12,0:12:32.87:0,33,264	0/0:14,0:14:38.92:0,39,319	0/0:14,0:13:35.73:0,36,274	0/0:9,0:9:23.85:0,24,181	0/0:23,0:23:53.52:0,54,438	0/0:10,0:10:17.98:0,18,155	1/1:2,25:27:78.11:833,78,0	1/1:4,17:21:53.88:569,54,0	1/1:5,9:14:21.06:242,21,0	0/0:10,0:10:20.77:0,21,156	0/0:14,0:14:29.91:0,30,243	0/0:8,0:8:17.16:0,17,122	0/0:14,0:13:36.01:0,36,326	0/0:25,0:25:61.76:0,62,486	0/0:24,0:24:53.75:0,54,429	0/0:4,0:4:8.89:0,9,63
chr10	12260551	.	T	TA	9351.24	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-7.485;DP=626;FS=7.188;HRun=9;HaplotypeScore=62.4269;InbreedingCoeff=0.9514;MQ=53.99;MQ0=4;MQRankSum=-0.444;QD=23.26;ReadPosRankSum=2.104;VQSLOD=5.7928;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:22:41.01:0,41,343	1/1:1,9:10:27.07:299,27,0	0/0:17,0:10:8.03:0,8,207	0/0:13,0:7:1.79:0,2,46	1/1:5,27:30:63.13:683,63,0	0/0:35,0:35:77.96:0,78,677	0/0:12,0:12:17.96:0,18,156	0/0:43,0:43:99:0,114,985	1/1:1,20:21:42.11:464,42,0	1/1:1,29:29:84.21:920,84,0	1/1:6,24:30:57.11:617,57,0	1/1:1,15:16:39.10:424,39,0	1/1:2,17:19:33.05:352,33,0	1/1:1,17:18:39.11:431,39,0	1/1:4,25:29:63.17:696,63,0	1/1:1,16:17:27.07:299,27,0	1/1:2,19:21:50.16:537,50,0	1/1:3,17:18:33.09:365,33,0	0/0:11,0:10:26.98:0,27,231	0/0:32,0:32:80.91:0,81,696	0/0:21,0:21:44.99:0,45,391	1/1:4,20:24:48.09:517,48,0	1/1:5,28:33:75.16:829,75,0	1/1:2,9:11:12.03:133,12,0	0/0:18,0:18:29.94:0,30,260	1/1:2,24:26:72.18:789,72,0	1/1:3,27:30:48.02:531,48,0	1/1:0,14:14:42.11:465,42,0
chr10	12266419	.	T	TG	865.32	PASS	AB=0.750;AC=6;AF=0.107;AN=56;BaseQRankSum=-6.008;DP=515;FS=4.987;HRun=9;HaplotypeScore=86.7911;InbreedingCoeff=0.3227;MQ=78.13;MQ0=0;MQRankSum=-0.530;QD=7.73;ReadPosRankSum=-3.573;VQSLOD=1.3380;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:37.03:0,37,422	0/0:2,0:2:3:0,3,26	0/0:26,0:26:31.16:0,31,296	0/1:22,0:23:36.09:36,0,174	0/0:21,0:21:47.89:0,48,408	0/0:10,0:10:23.99:0,24,208	0/0:12,0:12:35.99:0,36,313	1/1:4,8:12:24.05:256,24,0	0/0:13,0:13:32.99:0,33,286	0/0:33,0:33:77.87:0,78,674	0/0:18,0:18:35.96:0,36,312	0/0:13,0:13:38.99:0,39,338	0/0:23,0:23:62.95:0,63,539	0/0:15,0:15:38.94:0,39,335	0/0:20,0:20:50.96:0,51,443	0/0:13,0:13:35.98:0,36,308	0/0:23,0:23:59.92:0,60,512	0/0:22,0:22:59.99:0,60,521	0/1:15,7:22:99:202,0,113	0/1:7,10:17:2.07:179,0,2	0/1:14,24:38:38.79:321,0,39	0/0:14,0:14:32.97:0,33,286	0/0:17,0:17:41.96:0,42,364	0/0:27,0:27:56.92:0,57,492	0/0:15,2:17:11.81:0,12,331	0/0:16,0:16:41.96:0,42,364	0/0:11,0:11:32.99:0,33,286	0/0:7,0:7:14.97:0,15,130
chr10	12271303	.	C	CATATA	187.08	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-1.536;DP=615;FS=5.962;HRun=0;HaplotypeScore=109.5420;InbreedingCoeff=0.8171;MQ=56.64;MQ0=22;MQRankSum=-2.861;QD=23.38;ReadPosRankSum=-0.006;VQSLOD=2.7732;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:39:99:0,108,2224	0/0:12,0:10:24.08:0,24,496	0/0:24,0:12:27.06:0,27,478	0/0:25,0:10:24.02:0,24,426	0/0:33,0:32:69.07:0,69,1496	1/1:1,3:3:3.01:95,3,0	1/1:1,2:2:6.02:190,6,0	0/0:25,0:20:54.19:0,54,1173	0/0:23,0:23:62.80:0,63,1367	0/0:28,0:28:75.26:0,75,1629	0/0:30,0:29:57.15:0,57,1131	0/0:17,0:17:48.16:0,48,1042	0/0:18,0:17:45.15:0,45,976	0/0:15,0:15:39.13:0,39,846	0/0:25,0:25:66.18:0,66,1360	0/0:20,0:20:51.18:0,51,1099	0/0:15,0:14:39.13:0,39,817	0/0:15,0:12:24.08:0,24,521	0/0:26,0:18:48.16:0,48,1027	0/0:36,0:36:90.31:0,90,1949	0/0:18,0:17:45.15:0,45,977	0/0:33,0:33:84.29:0,84,1755	0/0:29,0:28:69.24:0,69,1444	0/0:16,0:16:42.14:0,42,912	0/0:23,0:21:36.12:0,36,750	0/0:28,0:28:84.29:0,84,1805	0/0:27,0:27:75.26:0,75,1602	0/0:5,0:5:12.04:0,12,261
chr10	12272730	.	G	GA	2815.11	PASS	AB=0.938;AC=33;AF=0.635;AN=52;BaseQRankSum=-1.592;DP=391;FS=152.931;HRun=0;HaplotypeScore=26.9546;InbreedingCoeff=0.7122;MQ=38.03;MQ0=89;MQRankSum=-9.033;QD=15.22;ReadPosRankSum=1.123;VQSLOD=-0.0904;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:15:33.07:0,33,439	1/1:2,4:3:3.01:48,3,0	0/0:18,0:4:11.62:0,12,125	0/0:25,0:7:18.06:0,18,250	1/1:0,7:3:3.01:48,3,0	0/0:22,0:22:47.98:0,48,619	0/1:14,1:14:18.13:18,0,304	0/0:22,0:21:63.18:0,63,844	1/1:0,16:8:18.06:286,18,0	1/1:0,9:6:12.04:191,12,0	1/1:1,11:3:3.01:48,3,0	1/1:1,12:7:18.06:286,18,0	1/1:0,11:5:12.04:191,12,0	1/1:0,15:11:30.03:447,30,0	1/1:0,8:6:18.06:286,18,0	1/1:1,8:4:12.04:191,12,0	./.	./.	0/0:18,0:12:30.06:0,30,397	0/0:32,0:32:90.27:0,90,1229	0/0:19,0:19:48.16:0,48,671	1/1:0,5:3:3.01:48,3,0	1/1:1,7:2:3.01:48,3,0	1/1:3,9:2:3.01:48,3,0	0/0:19,0:19:48.16:0,48,667	1/1:0,13:8:24.06:358,24,0	1/1:2,20:10:27.09:430,27,0	1/1:2,2:1:3.01:38,3,0
chr10	12272734	.	CA	C	727.74	PASS	AC=4;AF=0.077;AN=52;BaseQRankSum=-0.245;DP=398;FS=12.181;HRun=2;HaplotypeScore=34.1192;InbreedingCoeff=0.4744;MQ=35.34;MQ0=88;MQRankSum=3.350;QD=19.67;ReadPosRankSum=2.484;VQSLOD=2.1040;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:27.09:0,27,399	0/0:4,0:2:3.01:0,3,45	0/0:17,0:4:11.01:0,11,95	0/0:25,0:6:18.03:0,18,246	0/0:10,0:4:3.01:0,3,44	1/1:1,20:21:45.15:582,45,0	1/1:4,12:13:4.09:252,4,0	0/0:22,0:20:57.18:0,57,836	0/0:15,0:7:17.99:0,18,241	0/0:9,0:5:12.04:0,12,179	0/0:11,0:2:2.94:0,3,18	0/0:13,0:7:17.95:0,18,216	0/0:11,0:5:11.99:0,12,153	0/0:15,0:10:21.03:0,21,287	0/0:9,0:7:18.01:0,18,242	0/0:9,0:4:11.99:0,12,153	./.	./.	0/0:18,0:11:27.08:0,27,384	0/0:32,0:32:87.12:0,87,1257	0/0:23,0:21:48.16:0,48,719	0/0:7,0:4:3.01:0,3,44	0/0:12,0:3:3.01:0,3,44	0/0:12,0:2:3.01:0,3,45	0/0:17,0:17:48.16:0,48,718	0/0:14,0:7:18.05:0,18,269	0/0:21,0:10:27.06:0,27,378	0/0:4,0:1:3.01:0,3,45
chr10	12275821	.	GAT	G	9549.42	PASS	AB=0.855;AC=47;AF=0.870;AN=54;BaseQRankSum=7.312;DP=481;FS=6.457;HRun=0;HaplotypeScore=70.1493;InbreedingCoeff=0.1763;MQ=71.87;MQ0=3;MQRankSum=-0.236;QD=20.67;ReadPosRankSum=1.974;VQSLOD=4.6832;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:29,3:31:46.79:47,0,813	0/1:4,5:11:22.24:151,0,22	./.	0/1:19,0:12:7.76:18,0,8	1/1:6,20:27:56.97:652,57,0	0/0:11,0:11:27.09:0,27,436	0/1:10,1:11:21.62:22,0,180	1/1:7,17:24:51.08:571,51,0	1/1:3,15:18:36.11:440,36,0	1/1:3,18:23:59.85:688,60,0	1/1:2,10:12:17.92:220,18,0	1/1:4,10:14:21.07:256,21,0	1/1:3,13:16:30.09:367,30,0	1/1:1,9:11:24.08:293,24,0	1/1:1,15:16:42.13:513,42,0	1/1:0,12:12:33.10:403,33,0	1/1:2,19:22:54:637,54,0	1/1:2,13:16:41.91:473,42,0	1/1:6,11:19:38.74:406,39,0	1/1:6,19:25:48.11:570,48,0	1/1:7,11:17:33.10:403,33,0	1/1:3,19:23:53.83:614,54,0	1/1:6,16:23:38.91:454,39,0	1/1:7,5:12:6.02:73,6,0	0/1:4,1:5:24.65:25,0,110	1/1:4,22:26:69.09:762,69,0	1/1:8,5:13:12.04:147,12,0	1/1:1,10:12:29.93:344,30,0
chr10	12276129	.	CGT	C	3051.74	PASS	AB=0.774;AC=38;AF=0.731;AN=52;BaseQRankSum=0.326;DP=466;FS=0.000;HRun=0;HaplotypeScore=81.0479;InbreedingCoeff=0.3877;MQ=56.92;MQ0=9;MQRankSum=0.257;QD=10.04;ReadPosRankSum=3.823;VQSLOD=3.1662;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:17,7:24:20.76:209,21,0	1/1:4,6:10:17.53:175,18,0	./.	./.	0/1:15,9:26:12.10:258,0,12	0/0:6,0:13:1.24:0,1,3	1/1:7,0:10:5.81:33,6,0	0/0:26,0:21:17.89:0,18,176	1/1:7,7:14:21.06:231,21,0	0/1:18,3:21:24.17:151,0,24	1/1:10,3:13:9.02:99,9,0	1/1:6,4:10:11.73:109,12,0	1/1:6,7:12:15.04:165,15,0	1/1:10,6:17:1.28:165,1,0	1/1:7,3:11:6:66,6,0	1/1:5,6:12:20.89:212,21,0	1/1:13,3:16:9.02:99,9,0	1/1:3,6:9:18.05:198,18,0	0/0:13,0:13:0.07:0,0,85	0/0:16,0:22:27.01:0,27,268	0/0:30,0:33:38.55:0,39,396	1/1:9,3:12:17.62:167,18,0	1/1:8,4:13:6.01:66,6,0	1/1:13,3:16:11.77:111,12,0	1/1:3,7:11:17.88:180,18,0	0/1:10,4:15:21.40:167,0,21	0/1:15,4:21:15.37:219,0,15	1/1:2,6:7:12.03:132,12,0
chr10	12276192	.	CTATCTA	C	694.20	PASS	AB=0.981;AC=28;AF=0.500;AN=56;BaseQRankSum=-2.293;DP=528;FS=3.776;HRun=0;HaplotypeScore=157.8705;InbreedingCoeff=-0.0692;MQ=55.92;MQ0=16;MQRankSum=1.534;QD=1.63;ReadPosRankSum=1.125;VQSLOD=2.3895;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:26:16.15:16,0,486	0/1:14,0:15:24.66:36,0,25	0/1:16,0:10:6.13:6,0,108	0/1:23,0:6:4.97:5,0,19	0/1:31,0:30:12.76:55,0,13	0/1:21,0:19:9.24:9,0,84	1/1:8,0:8:1.25:3,1,0	0/1:25,0:21:42.14:84,0,42	1/1:20,0:19:1.49:14,1,0	1/1:19,0:16:20.35:171,20,0	0/0:16,1:15:0.52:0,1,47	0/1:14,0:14:6.08:6,0,116	0/1:23,0:23:1.48:1,0,109	0/0:13,0:13:15.78:0,16,216	0/1:13,0:13:2.67:3,0,69	1/1:12,0:12:5.32:13,5,0	0/1:12,3:14:3.65:40,0,4	0/0:10,0:8:7.32:0,7,71	1/1:16,1:17:12.83:263,13,0	0/0:25,1:23:0.49:0,0,51	0/1:23,0:23:2.14:2,0,58	0/1:15,0:14:0.53:1,0,27	1/1:16,0:14:0.87:8,1,0	0/1:16,0:16:6.84:7,0,94	0/0:20,0:19:20.11:0,20,455	0/1:26,0:23:0.34:94,0,0	0/1:26,0:21:1.57:2,0,113	0/0:15,0:13:15.15:0,15,126
chr10	12276196	.	CTA	C	1629.35	PASS	AB=0.941;AC=37;AF=0.661;AN=56;BaseQRankSum=-2.367;DP=510;FS=1.923;HRun=0;HaplotypeScore=119.6696;InbreedingCoeff=0.0942;MQ=56.42;MQ0=17;MQRankSum=3.228;QD=3.84;ReadPosRankSum=1.107;VQSLOD=2.5056;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:25:46.94:0,47,577	0/1:12,2:14:10.04:120,0,10	0/1:15,0:10:5.78:6,0,108	0/0:19,0:6:5.56:0,6,30	1/1:23,7:28:13.24:217,13,0	1/1:17,2:17:0.79:18,1,0	1/1:4,3:7:1.25:3,1,0	0/1:28,0:22:5:5,0,140	1/1:19,0:18:2.30:19,2,0	1/1:17,0:14:24.80:207,25,0	1/1:14,2:14:0.34:23,0,0	0/1:15,0:15:5.53:6,0,27	0/0:23,0:23:4.23:0,4,37	0/1:14,0:14:14.59:15,0,20	0/1:14,0:14:25.80:26,0,33	1/1:10,1:11:8.33:55,8,0	0/1:15,1:14:3.46:40,0,3	0/1:11,1:10:0.27:86,0,0	1/1:13,3:15:23.31:214,23,0	0/1:22,4:23:6.92:7,0,33	1/1:22,1:23:7.90:80,8,0	1/1:9,5:13:11.33:101,11,0	1/1:11,3:12:8.33:57,8,0	1/1:16,0:16:1.52:13,2,0	0/1:20,0:19:38.61:39,0,384	1/1:22,2:21:16.86:158,17,0	0/1:16,8:19:0.95:272,0,1	0/0:15,1:13:11.77:0,12,38
chr10	12276198	.	A	ATC	1502.80	PASS	AB=0.980;AC=42;AF=0.750;AN=56;BaseQRankSum=1.083;DP=512;FS=0.606;HRun=0;HaplotypeScore=123.2697;InbreedingCoeff=-0.0109;MQ=55.33;MQ0=17;MQRankSum=3.955;QD=3.25;ReadPosRankSum=1.252;VQSLOD=2.5297;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:28:3.53:0,4,480	0/1:14,0:14:12.65:56,0,13	0/1:12,0:8:5.78:6,0,108	0/0:18,0:6:5.56:0,6,30	1/1:31,0:29:7.22:131,7,0	1/1:17,2:17:9.66:86,10,0	1/1:7,0:7:1.25:3,1,0	0/1:29,0:23:5.15:5,0,140	1/1:12,7:18:2.63:66,3,0	1/1:9,7:13:23.24:203,23,0	1/1:15,0:13:5.36:32,5,0	0/1:14,0:14:2.11:19,0,2	1/1:23,0:23:5.96:27,6,0	1/1:15,0:15:4.27:41,4,0	0/1:14,0:14:14.40:26,0,14	1/1:12,0:12:8.33:55,8,0	0/1:14,2:14:3.93:40,0,4	1/1:13,0:11:1.12:51,1,0	1/1:16,0:15:26.09:224,26,0	0/1:25,0:22:11.47:11,0,28	1/1:22,1:23:12.92:89,13,0	1/1:13,0:12:7.89:31,8,0	1/1:14,0:12:5.32:14,5,0	1/1:15,2:17:11.86:79,12,0	0/1:19,0:19:43.63:44,0,371	1/1:24,0:21:16.86:153,17,0	0/1:25,1:21:5.60:54,0,6	0/1:16,0:13:7.52:98,0,8
chr10	12278022	.	ATT	A	8036.26	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-4.248;DP=479;FS=11.529;HRun=11;HaplotypeScore=68.1534;InbreedingCoeff=0.9531;MQ=54.88;MQ0=3;MQRankSum=-0.462;QD=22.57;ReadPosRankSum=4.609;VQSLOD=3.1043;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:54.75:0,55,706	1/1:0,3:3:9.02:96,9,0	0/0:15,1:10:9.11:0,9,326	0/0:5,0:4:9.03:0,9,139	1/1:4,21:25:53.75:532,54,0	1/1:1,15:16:30.07:319,30,0	1/1:6,8:14:13.99:200,14,0	0/0:6,0:18:35.81:0,36,153	1/1:1,16:17:42.10:447,42,0	1/1:3,22:24:63.11:660,63,0	1/1:3,24:27:48.04:511,48,0	1/1:1,9:10:24.06:254,24,0	1/1:2,16:19:47.59:471,48,0	1/1:0,11:11:24.06:255,24,0	1/1:2,13:15:27.06:285,27,0	1/1:2,9:11:27.05:287,27,0	1/1:4,20:24:42.02:447,42,0	1/1:1,15:16:42.10:447,42,0	0/0:4,0:17:35.79:0,36,148	0/0:1,0:22:44.92:0,45,154	0/0:3,0:10:14.97:0,15,51	1/1:1,11:12:30.06:316,30,0	1/1:2,31:33:71.82:741,72,0	1/1:1,11:11:20.84:223,21,0	0/0:11,0:12:26.57:0,27,358	1/1:3,26:29:78.12:801,78,0	1/1:8,23:31:45.30:648,45,0	1/1:0,4:4:9.02:96,9,0
chr10	12279933	.	T	TG	15690.84	PASS	AB=0.539;AC=34;AF=0.607;AN=56;BaseQRankSum=10.992;DP=620;FS=0.000;HRun=0;HaplotypeScore=84.4601;InbreedingCoeff=0.8829;MQ=56.61;MQ0=12;MQRankSum=4.195;QD=40.86;ReadPosRankSum=2.745;VQSLOD=5.4238;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:65.98:0,66,903	1/1:0,12:12:36.12:575,36,0	0/0:16,0:10:30.09:0,30,404	0/0:23,0:15:45.11:0,45,608	1/1:0,34:34:84.29:1343,84,0	0/0:22,0:22:63.20:0,63,864	0/0:11,0:10:30.06:0,30,397	0/0:36,0:32:99:0,99,1379	1/1:1,22:23:63.21:1007,63,0	1/1:3,26:29:78.27:1243,78,0	1/1:0,29:29:75.26:1199,75,0	0/1:2,11:13:5.56:491,0,6	1/1:1,14:15:36.12:576,36,0	1/1:1,8:9:21.07:336,21,0	1/1:2,27:29:75.26:1190,75,0	1/1:1,14:15:39.13:624,39,0	1/1:0,23:23:60.20:959,60,0	0/1:2,13:15:2.80:536,0,3	0/0:20,0:16:45.15:0,45,630	0/0:28,0:28:84.27:0,84,1160	0/0:29,0:29:87.29:0,87,1215	1/1:0,25:25:63.21:1007,63,0	1/1:3,19:21:9.41:722,9,0	1/1:1,13:14:33.11:528,33,0	0/0:25,0:25:75.23:0,75,1030	1/1:1,27:28:81.24:1246,81,0	1/1:2,31:31:87.30:1390,87,0	1/1:1,15:16:45.15:719,45,0
chr10	12281277	.	TATC	T	11474.48	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=12.802;DP=572;FS=11.261;HRun=0;HaplotypeScore=91.4501;InbreedingCoeff=0.9685;MQ=56.89;MQ0=12;MQRankSum=0.336;QD=28.47;ReadPosRankSum=4.245;VQSLOD=4.6147;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:72.23:0,72,1435	1/1:2,8:10:21.07:304,21,0	0/0:20,0:9:27.09:0,27,542	0/0:9,0:5:9.03:0,9,165	1/1:6,27:33:57.19:824,57,0	1/1:3,21:24:51.17:738,51,0	1/1:2,11:13:26.91:390,27,0	0/0:23,0:22:54.17:0,54,1029	1/1:1,20:21:54.18:781,54,0	1/1:5,20:25:60.20:868,60,0	1/1:9,20:28:45.15:651,45,0	1/1:3,8:11:21.07:304,21,0	1/1:3,9:12:23.89:345,24,0	1/1:5,19:24:42.14:607,42,0	1/1:3,12:15:30.10:434,30,0	1/1:0,11:11:30.10:434,30,0	1/1:5,29:34:75.25:1084,75,0	1/1:8,6:14:18.06:260,18,0	0/0:15,0:11:21.07:0,21,427	0/0:38,0:38:90.29:0,90,1789	0/0:13,0:13:27.09:0,27,539	1/1:6,18:24:45.15:651,45,0	1/1:4,20:24:45.15:651,45,0	1/1:4,6:10:6.02:87,6,0	0/0:22,0:22:60.19:0,60,1178	1/1:6,14:20:42.13:587,42,0	1/1:7,26:33:63.21:911,63,0	1/1:2,14:16:39.13:564,39,0
chr10	12281603	.	GC	G	12167.64	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=13.758;DP=566;FS=1.015;HRun=2;HaplotypeScore=79.7073;InbreedingCoeff=0.9984;MQ=69.80;MQ0=0;MQRankSum=-1.798;QD=35.58;ReadPosRankSum=4.641;VQSLOD=5.2546;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,147,2080	1/1:0,7:7:18.06:227,18,0	0/0:14,0:14:36.02:0,36,436	0/0:12,1:13:33.10:0,33,446	1/1:0,19:19:57.12:718,57,0	0/0:13,0:13:39.10:0,39,544	0/0:12,0:12:36.12:0,36,538	0/0:21,0:21:63.21:0,63,926	1/1:0,22:22:63.20:818,63,0	1/1:0,26:26:78.25:1011,78,0	1/1:1,18:19:42.14:541,42,0	1/1:0,17:17:48.16:623,48,0	1/1:0,30:30:87.28:1129,87,0	1/1:0,11:11:27.09:350,27,0	1/1:0,22:22:66.21:857,66,0	1/1:0,16:16:39.13:506,39,0	1/1:0,22:22:63.20:818,63,0	1/1:0,22:22:57.19:739,57,0	0/0:28,0:28:84.24:0,84,1196	0/0:25,0:25:75.24:0,75,1102	0/0:27,0:27:81.27:0,81,1214	1/1:0,11:11:33.11:428,33,0	1/1:1,12:13:30.07:384,30,0	1/1:0,23:23:54.18:701,54,0	0/0:21,0:21:63.20:0,63,923	1/1:0,22:22:66.19:840,66,0	1/1:1,21:22:60.19:778,60,0	1/1:0,18:18:54.18:700,54,0
chr10	12282379	.	CCAGGCCCT	C	21756.89	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=17.913;DP=582;FS=3.311;HRun=0;HaplotypeScore=167.6045;InbreedingCoeff=0.9724;MQ=76.39;MQ0=0;MQRankSum=-18.163;QD=64.75;ReadPosRankSum=4.819;VQSLOD=4.8319;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,108,4759	1/1:2,10:12:27.09:774,27,0	0/0:19,0:19:51.17:0,51,1907	0/0:21,0:21:40.49:0,40,1940	1/1:4,35:39:94.20:2285,94,0	0/0:28,0:28:78.27:0,78,3415	0/0:12,0:12:36.11:0,36,1385	0/0:27,0:27:75.25:0,75,3008	1/1:5,24:29:60.21:1719,60,0	1/1:2,29:30:84.20:2156,84,0	1/1:2,16:18:45.15:1289,45,0	1/1:4,14:18:36.12:1031,36,0	1/1:1,19:20:51.17:1414,51,0	1/1:1,13:14:39.13:1068,39,0	1/1:1,16:17:45.15:1242,45,0	1/1:3,12:15:30.10:860,30,0	1/1:2,8:10:21.07:602,21,0	1/1:1,8:9:12.04:299,12,0	0/0:27,0:26:78.27:0,78,3181	0/0:30,1:31:7.38:0,7,3918	0/0:25,0:25:75.26:0,75,3133	1/1:1,23:24:66.23:1861,66,0	1/1:0,12:12:33.11:945,33,0	1/1:1,13:14:17.29:514,17,0	0/0:19,0:19:54.19:0,54,2402	1/1:0,19:19:54.17:1487,54,0	1/1:1,28:29:69.24:1951,69,0	1/1:1,5:6:9.03:258,9,0
chr10	12283434	.	TG	T	2103.20	PASS	AB=0.779;AC=17;AF=0.304;AN=56;BaseQRankSum=15.821;DP=670;FS=21.015;HRun=5;HaplotypeScore=85.1309;InbreedingCoeff=-0.4360;MQ=71.66;MQ0=16;MQRankSum=-10.423;QD=4.61;ReadPosRankSum=1.889;VQSLOD=-0.2920;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:63.20:0,63,845	0/1:6,5:9:74.82:75,0,219	0/0:18,0:17:45.13:0,45,577	0/0:18,0:18:51.16:0,51,645	0/1:18,4:22:72.58:73,0,618	0/0:30,1:31:53.30:0,53,1092	0/1:11,10:16:65.96:66,0,332	0/1:29,14:36:99:108,0,964	0/1:17,3:19:10.76:11,0,624	0/1:28,5:32:42.72:43,0,1015	0/1:19,10:28:99:213,0,619	0/0:9,1:9:27.09:0,27,369	0/0:14,1:15:8.15:0,8,483	0/0:16,0:16:48.16:0,48,652	0/0:16,0:16:48.14:0,48,626	0/0:18,1:19:20.20:0,20,663	0/1:19,8:27:99:191,0,677	0/1:13,17:28:99:409,0,449	0/1:13,5:16:53.83:54,0,453	0/1:25,8:30:82.82:83,0,881	0/1:16,4:20:75.96:76,0,559	0/1:26,6:31:79.62:80,0,920	0/1:28,4:31:11.63:12,0,1001	0/1:10,22:30:99:577,0,319	0/0:21,0:21:51.16:0,51,682	0/0:23,4:24:35.24:0,35,869	0/1:32,4:36:42.61:43,0,1011	0/1:11,6:17:99:153,0,400
chr10	12284744	.	TA	T	3459.45	PASS	AB=0.870;AC=40;AF=0.714;AN=56;BaseQRankSum=6.367;DP=529;FS=15.107;HRun=16;HaplotypeScore=111.1869;InbreedingCoeff=0.7738;MQ=71.24;MQ0=2;MQRankSum=-4.686;QD=9.32;ReadPosRankSum=8.429;VQSLOD=0.8671;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:16,4:20:60.77:63,0,61	1/1:1,3:4:5.84:36,6,0	0/0:32,1:25:10.52:0,11,154	0/1:20,1:17:3.67:4,0,57	1/1:6,15:22:26.88:207,27,0	0/0:14,1:15:3.96:0,4,171	0/0:11,0:11:14.07:0,14,139	0/0:13,0:24:22.81:0,23,98	1/1:8,9:18:28.44:167,28,0	1/1:12,12:24:35.70:215,36,0	1/1:8,12:21:31.85:186,32,0	1/1:4,8:13:13.69:119,14,0	1/1:4,7:11:11.79:114,12,0	1/1:4,5:9:14.69:90,15,0	1/1:4,7:12:16.16:122,16,0	1/1:4,9:14:14.41:135,14,0	1/1:12,18:32:54:316,54,0	1/1:5,8:14:25.43:149,25,0	0/0:15,0:19:19.47:0,19,172	0/0:14,0:36:67.01:0,67,403	0/0:9,0:19:14.72:0,15,103	1/1:8,24:32:61.60:376,62,0	1/1:8,12:22:34.25:202,34,0	1/1:5,6:11:17.60:107,18,0	1/1:12,8:20:29.07:176,29,0	1/1:2,12:15:37.33:220,37,0	1/1:6,20:27:60.84:364,61,0	1/1:2,5:7:14.70:90,15,0
chr10	12285247	.	C	CAAAA	9716.59	PASS	AB=1.000;AC=35;AF=0.625;AN=56;BaseQRankSum=0.172;DP=536;FS=3.447;HRun=10;HaplotypeScore=114.7202;InbreedingCoeff=0.9034;MQ=65.15;MQ0=1;MQRankSum=-5.357;QD=29.71;ReadPosRankSum=-5.197;VQSLOD=2.3630;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:30:72.01:0,72,970	1/1:2,5:7:15.05:322,15,0	0/0:18,0:19:34.46:0,34,397	0/0:10,0:11:12.87:0,13,254	1/1:8,14:24:54.08:838,54,0	0/0:18,0:19:45.10:0,45,637	0/0:14,0:14:36.08:0,36,471	0/0:26,0:29:64.27:0,64,826	1/1:8,13:21:32.32:667,32,0	1/1:11,13:29:60.07:1046,60,0	1/1:6,16:24:50.25:775,50,0	1/1:7,5:15:14.94:288,15,0	1/1:6,4:11:12.04:216,12,0	1/1:5,4:9:18.06:385,18,0	1/1:0,10:13:27.09:568,27,0	1/1:7,16:23:27.08:560,27,0	1/1:6,7:15:14.97:269,15,0	0/1:10,0:10:34.06:227,0,34	0/0:17,0:17:20.88:0,21,533	0/0:34,0:34:84.12:0,84,1169	0/0:14,0:14:30.05:0,30,424	1/1:8,11:23:48.03:727,48,0	1/1:5,10:18:33.87:530,34,0	1/1:6,3:17:14.07:220,14,0	0/0:22,0:22:57.10:0,57,802	1/1:6,9:20:48.12:892,48,0	1/1:12,22:35:39.12:754,39,0	1/1:1,4:11:24:433,24,0
chr10	12285686	.	TA	T	7548.26	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=6.719;DP=522;FS=13.656;HRun=12;HaplotypeScore=88.3930;InbreedingCoeff=0.9950;MQ=69.06;MQ0=1;MQRankSum=-0.920;QD=18.01;ReadPosRankSum=1.883;VQSLOD=4.7900;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:21:39.30:0,39,505	1/1:3,7:10:20.85:157,21,0	0/0:18,0:17:26.44:0,26,214	0/0:16,0:14:19.39:0,19,186	1/1:1,25:26:72.91:559,73,0	0/0:19,0:19:54.09:0,54,537	0/0:15,0:15:35.89:0,36,339	1/1:4,23:26:38.27:480,38,0	1/1:4,19:23:50.63:392,51,0	1/1:3,18:22:55.73:411,56,0	1/1:0,22:22:62.75:487,63,0	1/1:2,11:13:23.91:185,24,0	1/1:1,15:16:38.85:301,39,0	1/1:3,11:14:34.23:258,34,0	1/1:3,14:17:41.82:324,42,0	1/1:2,13:16:34.91:261,35,0	1/1:4,17:21:44.82:348,45,0	1/1:4,8:12:25.26:187,25,0	1/1:3,18:21:53.72:409,54,0	1/1:5,25:30:62.50:478,63,0	1/1:0,8:8:20.92:163,21,0	1/1:2,19:21:37.46:358,37,0	1/1:2,12:14:32.86:255,33,0	1/1:2,8:10:20.92:162,21,0	0/0:13,0:13:35.90:0,36,344	1/1:4,25:29:75.95:582,76,0	1/1:6,26:32:66.62:512,67,0	1/1:2,13:15:35.86:278,36,0
chr10	12286106	.	CA	C	353.88	PASS	AB=0.795;AC=12;AF=0.222;AN=54;BaseQRankSum=-6.606;DP=242;FS=4.322;HRun=16;HaplotypeScore=64.9708;InbreedingCoeff=0.2797;MQ=47.35;MQ0=22;MQRankSum=5.667;QD=2.56;ReadPosRankSum=-0.051;VQSLOD=-0.7628;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:26,3:30:12.40:12,0,235	0/0:3,0:2:4.99:0,5,18	0/0:13,0:4:8.64:0,9,56	0/0:9,1:4:1.47:0,1,20	0/0:8,0:7:18.16:0,18,69	1/1:5,0:12:12.20:35,12,0	1/1:3,0:11:14.23:41,14,0	0/1:8,7:16:28.09:99,0,28	0/0:5,0:5:12.58:0,13,47	0/0:5,0:3:6.78:0,7,22	0/0:7,0:6:15.48:0,15,58	0/0:3,0:3:4.99:0,5,19	0/0:2,0:1:2.50:0,2,9	0/0:3,0:2:4.99:0,5,19	0/0:4,0:4:9.98:0,10,38	0/0:3,0:1:3:0,3,25	0/0:4,0:3:4.99:0,5,18	0/0:5,0:3:6.96:0,7,22	1/1:11,6:14:1.37:117,1,0	0/1:12,8:19:11.57:127,0,12	1/1:5,6:11:8.72:54,9,0	0/0:2,0:2:5.09:0,5,19	0/0:4,0:4:10.28:0,10,38	0/0:4,0:3:5.09:0,5,20	0/1:13,1:16:17.59:18,0,57	0/0:5,0:5:11.98:0,12,41	0/0:9,0:8:19.49:0,19,70	./.
chr10	12286980	.	T	TA	12324.56	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=8.018;DP=600;FS=1.944;HRun=6;HaplotypeScore=77.5576;InbreedingCoeff=0.9937;MQ=62.41;MQ0=2;MQRankSum=1.476;QD=32.60;ReadPosRankSum=1.735;VQSLOD=5.1376;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:18.58:0,19,374	1/1:0,5:5:15.05:189,15,0	0/0:27,0:17:41.95:0,42,407	0/0:30,0:14:26.05:0,26,323	1/1:0,27:27:75.20:926,75,0	0/0:20,0:20:57.13:0,57,582	0/0:20,0:20:54.12:0,54,550	0/0:27,0:26:57.12:0,57,582	1/1:3,22:25:60.19:755,60,0	1/1:3,14:17:42.13:528,42,0	1/1:2,20:22:57.18:717,57,0	1/1:1,16:17:48.15:604,48,0	1/1:2,17:19:48.15:604,48,0	1/1:0,16:16:45.14:566,45,0	1/1:1,16:17:48.15:604,48,0	1/1:4,8:12:24.08:302,24,0	1/1:6,29:35:49.54:963,50,0	1/1:3,26:29:72.23:906,72,0	0/0:13,0:13:33.07:0,33,337	0/0:20,0:20:57.13:0,57,582	0/0:21,0:21:60.14:0,60,612	1/1:1,30:31:90.29:1132,90,0	1/1:1,28:29:75.24:944,75,0	1/1:3,20:23:48.43:774,48,0	0/0:25,0:25:75.17:0,75,765	1/1:0,26:26:75.24:944,75,0	1/1:2,19:21:54.17:679,54,0	1/1:1,6:7:15.05:189,15,0
chr10	12287661	.	A	AG	12301.73	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-12.988;DP=626;FS=4.600;HRun=4;HaplotypeScore=64.0089;InbreedingCoeff=0.9961;MQ=84.28;MQ0=0;MQRankSum=-2.791;QD=35.35;ReadPosRankSum=5.729;VQSLOD=4.8828;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,105,1178	1/1:1,8:9:27.09:363,27,0	0/0:31,0:30:75.20:0,75,839	0/0:31,0:31:43.24:0,43,765	1/1:0,21:22:60.10:778,60,0	0/0:14,0:14:42.12:0,42,476	0/0:14,0:14:42.08:0,42,462	0/0:32,0:32:81.20:0,81,893	1/1:2,24:26:69.23:944,69,0	1/1:1,22:23:66.22:903,66,0	1/1:0,17:17:48.16:657,48,0	1/1:0,19:19:51.17:698,51,0	1/1:0,11:11:27.09:369,27,0	1/1:1,11:12:33.11:451,33,0	1/1:1,15:16:36.12:493,36,0	1/1:3,18:21:51.17:698,51,0	1/1:0,14:14:39.13:534,39,0	1/1:3,12:15:13.28:390,13,0	0/0:21,0:21:57.15:0,57,638	0/0:22,0:22:66.19:0,66,749	0/0:40,0:40:99:0,114,1284	1/1:3,33:36:90.30:1231,90,0	1/1:1,22:23:51.02:697,51,0	1/1:0,23:23:66.22:903,66,0	0/0:31,0:31:90.26:0,90,1021	1/1:2,23:25:66.18:883,66,0	1/1:1,22:23:57.19:780,57,0	1/1:0,13:13:39.13:533,39,0
chr10	12288419	.	AG	A	5666.81	PASS	AB=1.000;AC=37;AF=0.661;AN=56;BaseQRankSum=7.799;DP=577;FS=0.000;HRun=10;HaplotypeScore=78.8975;InbreedingCoeff=0.8644;MQ=54.78;MQ0=13;MQRankSum=3.993;QD=15.36;ReadPosRankSum=3.533;VQSLOD=5.1961;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,1:40:64.18:0,64,927	1/1:0,9:9:24:208,24,0	0/0:28,0:9:8.94:0,9,82	0/0:21,0:6:0.80:0,1,27	1/1:4,13:17:32.99:286,33,0	0/0:13,0:11:8.52:0,9,42	0/0:21,0:17:16.95:0,17,82	0/0:18,0:18:30.02:0,30,309	1/1:6,19:25:32.88:285,33,0	1/1:11,20:29:53.97:467,54,0	1/1:6,10:16:26.99:233,27,0	1/1:7,14:21:32.26:286,32,0	1/1:5,17:21:38.97:338,39,0	1/1:3,24:26:62.83:547,63,0	1/1:3,17:20:35.98:313,36,0	1/1:7,15:21:26.98:234,27,0	1/1:3,17:20:47.98:417,48,0	1/1:3,13:16:38.99:339,39,0	0/1:14,0:12:3.13:3,0,177	0/0:16,1:17:13.01:0,13,355	0/0:38,0:37:42.80:0,43,681	1/1:8,14:21:38.99:338,39,0	1/1:4,13:16:35.86:297,36,0	1/1:5,11:15:32.95:279,33,0	0/0:10,0:10:21.06:0,21,232	1/1:5,16:21:20.02:387,20,0	1/1:6,16:22:5.92:280,6,0	1/1:3,8:11:14.99:130,15,0
chr10	12288428	.	G	GGGC	303.23	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-0.491;DP=522;FS=2.667;HRun=0;HaplotypeScore=104.7215;InbreedingCoeff=0.8799;MQ=52.05;MQ0=24;MQRankSum=-2.721;QD=9.19;ReadPosRankSum=-1.938;VQSLOD=2.9826;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,102,1418	0/0:11,0:11:26.98:0,27,233	0/0:22,0:5:6:0,6,86	0/0:18,0:3:8.98:0,9,74	0/0:14,0:14:35.97:0,36,312	1/1:3,8:10:9.02:156,9,0	1/1:5,7:15:18.05:259,18,0	0/0:23,0:18:50.86:0,51,555	0/0:20,0:20:32.65:0,33,293	0/0:27,0:24:66.38:0,66,563	0/0:13,0:13:29.92:0,30,247	0/0:17,0:17:35.68:0,36,313	0/0:19,0:17:41.98:0,42,363	0/0:27,0:26:63.02:0,63,558	0/0:18,0:18:38.98:0,39,340	0/0:16,0:15:27.01:0,27,240	0/0:20,0:19:51:0,51,447	0/0:15,0:15:42:0,42,368	0/0:14,0:12:32.99:0,33,372	0/0:17,0:17:42.09:0,42,560	0/0:32,0:31:81.38:0,81,1078	0/0:17,0:16:38.95:0,39,336	0/0:17,0:15:35.99:0,36,321	0/0:13,0:12:31.56:0,32,270	0/0:10,0:9:24.07:0,24,345	0/0:20,0:20:31.35:0,31,457	0/0:18,0:18:41.98:0,42,384	0/0:11,0:11:17.99:0,18,155
chr10	12289003	.	GT	G	11151.80	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=15.884;DP=724;FS=2.163;HRun=6;HaplotypeScore=96.3927;InbreedingCoeff=0.9929;MQ=60.10;MQ0=11;MQRankSum=4.108;QD=26.18;ReadPosRankSum=3.423;VQSLOD=4.9004;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,123,1526	1/1:0,8:8:15.04:161,15,0	0/0:32,0:18:29.24:0,29,398	0/0:27,1:17:13.92:0,14,284	1/1:2,25:27:75.15:792,75,0	0/0:19,0:19:48.13:0,48,599	0/0:33,0:33:90.29:0,90,1175	0/0:29,0:24:57.14:0,57,699	1/1:1,39:40:99:1159,108,0	1/1:0,19:19:56.97:571,57,0	1/1:1,15:16:23.92:240,24,0	1/1:1,22:22:51.13:548,51,0	1/1:1,13:14:36.04:386,36,0	1/1:0,25:25:66.17:709,66,0	1/1:0,21:21:51.13:548,51,0	1/1:1,23:24:63.16:677,63,0	1/1:2,29:31:66.17:709,66,0	1/1:0,17:17:39.10:419,39,0	0/0:21,0:14:36.10:0,36,457	0/0:21,0:21:63.20:0,63,826	0/0:41,0:41:99:0,111,1439	1/1:1,21:22:54.13:580,54,0	1/1:0,18:18:42.11:450,42,0	1/1:4,42:46:99:1224,114,0	0/0:25,0:24:65.99:0,66,850	1/1:3,26:28:72.16:766,72,0	1/1:3,37:40:87.14:1019,87,0	1/1:0,6:6:18.05:193,18,0
chr10	12289561	.	CTTG	C	4958.44	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=12.154;DP=536;FS=4.498;HRun=0;HaplotypeScore=67.5213;InbreedingCoeff=0.9022;MQ=59.15;MQ0=29;MQRankSum=-0.716;QD=20.92;ReadPosRankSum=1.817;VQSLOD=4.1424;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:96.22:0,96,2028	1/1:1,12:11:17.82:289,18,0	0/0:31,0:22:62.58:0,63,1249	0/0:15,0:11:27.09:0,27,502	1/1:3,19:15:30.10:482,30,0	0/0:37,0:36:96.33:0,96,2093	0/0:20,0:20:57.20:0,57,1256	0/0:44,0:43:99:0,111,2317	1/1:2,10:8:15.05:241,15,0	1/1:3,15:13:33.10:509,33,0	1/1:2,10:9:9.03:144,9,0	1/1:1,7:7:9.03:144,9,0	1/1:1,7:5:2.97:49,3,0	1/1:1,5:4:6.02:96,6,0	1/1:2,9:9:6.02:96,6,0	1/1:2,8:7:12.04:192,12,0	1/1:1,13:10:12.04:193,12,0	1/1:0,8:8:12.04:190,12,0	0/0:35,0:33:87.30:0,87,1898	0/0:33,0:33:93.31:0,93,1972	0/0:29,0:29:87.30:0,87,1910	1/1:3,11:10:18.06:289,18,0	1/1:0,19:16:36.12:573,36,0	1/1:1,14:12:33.11:530,33,0	0/0:18,0:18:51.18:0,51,1096	1/1:2,8:5:15.04:219,15,0	1/1:5,21:21:33.11:530,33,0	1/1:1,8:7:12.04:193,12,0
chr10	12289937	.	C	CTT	8840.27	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=11.738;DP=532;FS=27.045;HRun=8;HaplotypeScore=76.1552;InbreedingCoeff=0.9624;MQ=64.73;MQ0=10;MQRankSum=1.703;QD=28.15;ReadPosRankSum=3.714;VQSLOD=3.0457;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:44:99:0,123,1288	1/1:3,8:9:12.04:190,12,0	0/0:17,0:15:28.58:0,29,294	0/0:13,0:11:12.97:0,13,205	1/1:5,15:16:31.50:388,32,0	0/0:22,0:22:60.12:0,60,657	0/0:20,0:20:51.10:0,51,550	0/0:21,0:21:51.09:0,51,542	1/1:2,17:19:45.15:715,45,0	1/1:6,9:16:21.05:309,21,0	1/1:1,12:12:21.03:305,21,0	1/1:5,12:16:27.56:425,28,0	1/1:0,10:11:26.58:389,27,0	1/1:2,9:12:20.56:294,21,0	1/1:0,14:16:35.29:532,35,0	1/1:2,22:25:53.82:829,54,0	1/1:2,21:24:56.68:866,57,0	1/1:9,20:27:48.16:762,48,0	0/0:20,0:18:42.07:0,42,444	0/0:30,0:31:69.10:0,69,827	0/0:13,0:13:36.09:0,36,401	1/1:2,20:21:39.13:619,39,0	1/1:2,13:14:18.06:286,18,0	1/1:1,16:15:36.12:571,36,0	0/0:16,0:17:36.03:0,36,450	1/1:4,20:24:51.13:761,51,0	1/1:1,16:17:38.57:552,39,0	1/1:1,1:2:3.01:48,3,0
chr10	12290206	.	A	AATACAACTTTCCACCCCGG	13618.22	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=0.240;DP=484;FS=61.474;HRun=0;HaplotypeScore=152.9893;InbreedingCoeff=0.8633;MQ=56.97;MQ0=10;MQRankSum=-10.656;QD=55.81;ReadPosRankSum=0.990;VQSLOD=2.0171;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:32:93.27:0,93,4459	1/1:4,4:7:9.03:721,9,0	0/0:19,0:15:38.03:0,38,1379	0/0:19,0:18:31.45:0,31,1631	1/1:10,1:9:9.03:395,9,0	0/0:18,0:16:48.16:0,48,2305	0/0:17,0:17:48.16:0,48,2130	0/0:37,0:37:99:0,102,4521	1/1:12,3:13:18.06:1435,18,0	1/1:9,4:12:12.03:586,12,0	1/1:8,5:10:12.04:657,12,0	1/1:9,5:8:9.03:507,9,0	1/1:10,7:12:21.04:1364,21,0	1/1:7,5:10:12:664,12,0	1/1:11,7:12:9.03:446,9,0	1/1:9,6:12:18.06:1207,18,0	1/1:2,1:3:6.02:412,6,0	1/1:3,3:3:3.01:274,3,0	0/0:20,0:19:54.19:0,54,2575	0/0:30,0:30:87.30:0,87,4246	0/0:28,0:28:78.26:0,78,3893	1/1:7,4:9:3.01:274,3,0	1/1:7,4:12:8.99:354,9,0	1/1:4,3:5:9.03:294,9,0	0/0:19,0:18:45.15:0,45,2278	1/1:6,6:12:26.95:1981,27,0	1/1:13,5:13:21.07:1429,21,0	1/1:6,0:5:12:618,12,0
chr10	12290525	.	TA	T	2133.23	PASS	AC=34;AF=0.630;AN=54;BaseQRankSum=10.541;DP=359;FS=10.952;HRun=5;HaplotypeScore=39.9553;InbreedingCoeff=0.8628;MQ=54.97;MQ0=7;MQRankSum=-4.046;QD=12.12;ReadPosRankSum=-3.663;VQSLOD=0.0713;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:48.16:0,48,656	./.	0/0:12,0:7:15.05:0,15,197	0/0:13,0:8:16.74:0,17,186	1/1:2,9:9:15.04:170,15,0	0/0:17,0:17:42.14:0,42,574	0/0:6,0:6:15.05:0,15,205	0/0:28,0:25:69.22:0,69,925	1/1:2,14:8:15.04:169,15,0	1/1:0,16:10:30.09:340,30,0	1/1:1,9:9:21.06:237,21,0	1/1:2,8:4:3.01:34,3,0	1/1:1,7:5:12.03:136,12,0	1/1:1,9:4:9.03:102,9,0	1/1:1,12:5:6.02:68,6,0	1/1:1,8:4:6.02:68,6,0	1/1:0,10:4:9.03:102,9,0	1/1:1,6:4:9.03:102,9,0	0/0:21,0:19:48.16:0,48,657	0/0:34,0:34:99:0,102,1378	0/0:9,0:9:27.09:0,27,369	1/1:0,6:3:6.02:68,6,0	1/1:1,9:7:18.05:204,18,0	1/1:0,6:3:9.03:102,9,0	0/0:23,0:22:63.21:0,63,862	1/1:1,9:6:15.04:169,15,0	1/1:3,14:5:9.02:102,9,0	1/1:0,7:6:15.04:170,15,0
chr10	12291133	.	TA	T	7354.64	PASS	AB=0.731;AC=36;AF=0.643;AN=56;BaseQRankSum=13.430;DP=590;FS=2.776;HRun=8;HaplotypeScore=57.4639;InbreedingCoeff=0.8500;MQ=50.50;MQ0=41;MQRankSum=-1.487;QD=19.30;ReadPosRankSum=5.631;VQSLOD=4.7511;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:72.20:0,72,847	1/1:0,10:9:24.04:232,24,0	0/0:21,0:2:2.82:0,3,30	0/1:10,0:2:0.65:1,0,12	1/1:6,29:29:69.10:666,69,0	0/0:25,1:26:69.21:0,69,834	0/0:17,1:14:27.08:0,27,326	0/0:32,0:20:51.14:0,51,603	1/1:4,11:14:33.02:307,33,0	1/1:6,20:24:57.08:550,57,0	1/1:5,23:22:48.08:463,48,0	1/1:3,16:18:36.05:348,36,0	1/1:0,12:11:30.05:290,30,0	1/1:2,10:12:24.03:232,24,0	1/1:4,14:17:33.04:319,33,0	1/1:5,22:27:72.08:685,72,0	1/1:7,14:21:34.80:421,35,0	1/1:3,6:8:12.02:116,12,0	0/0:27,0:22:57.14:0,57,664	0/0:28,0:28:75.23:0,75,906	0/0:8,0:8:18.06:0,18,217	1/1:5,18:22:51.08:492,51,0	1/1:5,27:26:51.08:493,51,0	1/1:1,10:10:30.05:290,30,0	0/0:22,0:22:54.17:0,54,652	1/1:6,26:30:72.09:688,72,0	1/1:1,24:25:66.10:637,66,0	0/1:2,10:9:18.01:127,0,18
chr10	12291211	.	A	AT	9673.08	PASS	AB=1.000;AC=37;AF=0.661;AN=56;BaseQRankSum=-6.324;DP=566;FS=1.601;HRun=7;HaplotypeScore=52.9485;InbreedingCoeff=0.9466;MQ=56.13;MQ0=21;MQRankSum=0.555;QD=26.65;ReadPosRankSum=1.413;VQSLOD=5.5509;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:72.09:0,72,688	1/1:0,5:5:15.05:181,15,0	0/1:15,0:6:0.83:1,0,24	0/0:13,1:7:14.39:0,14,121	1/1:6,25:26:69.11:787,69,0	0/0:25,0:24:60.09:0,60,579	0/0:17,0:16:39.06:0,39,377	0/0:30,0:30:75.09:0,75,717	1/1:2,15:16:44.81:518,45,0	1/1:2,28:29:87.25:1036,87,0	1/1:3,23:22:51.16:616,51,0	1/1:3,14:16:39.08:455,39,0	1/1:1,15:16:42.11:494,42,0	1/1:0,7:6:18.06:217,18,0	1/1:3,9:10:24.07:290,24,0	1/1:1,16:17:38.93:470,39,0	1/1:1,18:19:45.14:542,45,0	1/1:2,21:22:60.14:708,60,0	0/0:16,0:13:33.05:0,33,319	0/0:34,0:33:90.07:0,90,854	0/0:5,0:5:15.02:0,15,145	1/1:1,24:19:51.16:614,51,0	1/1:5,16:16:36.09:413,36,0	1/1:1,8:8:18.06:217,18,0	0/0:34,0:34:93.15:0,93,898	1/1:6,20:24:63.19:761,63,0	1/1:4,24:27:78.21:917,78,0	1/1:0,15:12:36.11:435,36,0
chr10	12292330	.	A	AGGTGAG	10047.37	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=13.142;DP=401;FS=5.059;HRun=0;HaplotypeScore=94.6038;InbreedingCoeff=0.8730;MQ=66.14;MQ0=5;MQRankSum=-12.458;QD=52.88;ReadPosRankSum=2.592;VQSLOD=4.6714;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:54.16:0,54,1280	1/1:3,3:3:6.02:218,6,0	0/0:26,0:23:62.48:0,62,1461	0/0:20,0:18:32.82:0,33,1136	1/1:4,17:17:21.07:716,21,0	0/0:25,0:25:57.20:0,57,1368	0/0:13,0:13:33.11:0,33,753	0/0:33,0:32:90.27:0,90,2041	1/1:3,7:8:12.04:437,12,0	1/1:6,8:12:33.11:1180,33,0	1/1:6,10:12:15.05:497,15,0	1/1:0,6:6:6.02:218,6,0	1/1:3,13:14:36.12:1252,36,0	1/1:4,6:8:12.04:437,12,0	1/1:4,10:11:18.02:566,18,0	1/1:3,3:6:15.05:545,15,0	1/1:2,4:5:15.05:522,15,0	1/1:2,2:3:2.76:58,3,0	0/0:25,0:24:72.24:0,72,1667	0/0:22,0:22:63.20:0,63,1478	0/0:9,0:9:27.09:0,27,645	1/1:3,4:3:9.03:327,9,0	1/1:3,10:8:12.04:436,12,0	1/1:3,1:2:6.02:170,6,0	0/0:15,0:15:42.14:0,42,1035	1/1:2,8:9:27.09:986,27,0	1/1:7,14:22:39.11:1373,39,0	1/1:0,2:1:3.01:109,3,0
chr10	12292335	.	TC	T	2603.15	PASS	AC=32;AF=0.615;AN=52;BaseQRankSum=12.450;DP=340;FS=3.110;HRun=2;HaplotypeScore=71.7879;InbreedingCoeff=0.8558;MQ=75.17;MQ0=0;MQRankSum=-11.767;QD=19.72;ReadPosRankSum=3.918;VQSLOD=3.9243;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:54.18:0,54,863	./.	0/0:24,0:24:68.24:0,68,989	0/0:19,0:18:45.96:0,46,797	1/1:0,17:13:17.06:228,17,0	0/0:25,0:25:63.21:0,63,1002	0/0:11,0:11:27.07:0,27,407	0/0:29,0:29:84.26:0,84,1313	1/1:0,7:6:6.02:83,6,0	1/1:1,8:7:21.07:293,21,0	1/1:1,10:8:15.04:187,15,0	1/1:0,6:6:6.02:83,6,0	1/1:0,14:13:32.32:417,32,0	1/1:0,6:5:3.01:42,3,0	1/1:1,10:8:12.04:166,12,0	1/1:0,3:3:6.02:83,6,0	1/1:0,5:3:9.03:119,9,0	./.	0/0:26,0:26:78.27:0,78,1238	0/0:24,0:24:66.22:0,66,1045	0/0:8,0:8:24.05:0,24,349	1/1:2,4:4:11.95:123,12,0	1/1:0,10:5:12.04:166,12,0	1/1:0,2:2:6.02:67,6,0	0/0:15,0:15:42.14:0,42,669	1/1:0,8:8:24.08:335,24,0	1/1:0,15:15:27.09:374,27,0	1/1:0,2:1:3.01:42,3,0
chr10	12293697	.	CAATCTAGTCTCCAA	C	4330.45	PASS	AC=28;AF=0.583;AN=48;BaseQRankSum=10.029;DP=566;FS=9.301;HRun=0;HaplotypeScore=132.8476;InbreedingCoeff=0.7953;MQ=45.51;MQ0=18;MQRankSum=-7.628;QD=16.53;ReadPosRankSum=-0.345;VQSLOD=2.5564;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:60.21:0,60,3537	1/1:2,8:8:9.03:363,9,0	0/0:24,0:4:9.03:0,9,561	0/0:24,0:11:20.47:0,20,1315	1/1:5,20:17:3.01:121,3,0	0/0:28,0:28:63.22:0,63,3905	0/0:15,0:14:33.07:0,33,1904	0/0:25,0:20:33.10:0,33,1903	1/1:13,16:22:11.91:484,12,0	1/1:4,19:11:21:417,21,0	1/1:6,10:12:3.01:121,3,0	./.	1/1:7,11:14:3.01:121,3,0	1/1:3,9:10:6.02:242,6,0	1/1:3,18:14:6.02:242,6,0	1/1:6,19:17:9.03:363,9,0	1/1:6,7:11:6.02:242,6,0	1/1:7,7:11:3.01:121,3,0	0/0:13,0:9:21.07:0,21,1049	0/0:31,0:31:78.27:0,78,5141	0/0:33,0:33:84.27:0,84,5180	./.	./.	./.	0/0:24,0:24:66.22:0,66,4212	1/1:6,13:15:18.03:314,18,0	1/1:7,21:21:18.06:727,18,0	1/1:1,8:8:12.04:453,12,0
chr10	12294361	.	TG	T	10190.90	PASS	AB=0.519;AC=35;AF=0.625;AN=56;BaseQRankSum=14.348;DP=636;FS=11.207;HRun=1;HaplotypeScore=113.4794;InbreedingCoeff=0.8947;MQ=54.82;MQ0=22;MQRankSum=-0.405;QD=26.61;ReadPosRankSum=4.033;VQSLOD=3.6314;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:39:99:0,108,1634	1/1:0,10:10:27.01:302,27,0	0/0:22,0:10:12.48:0,12,186	0/0:30,0:6:15.05:0,15,214	1/1:3,35:37:35.36:873,35,0	0/0:19,0:19:51.16:0,51,745	0/0:23,0:22:48.01:0,48,745	0/0:35,0:33:96.28:0,96,1386	1/1:1,18:18:39.12:491,39,0	1/1:3,19:19:51.12:599,51,0	1/1:0,16:16:44.95:497,45,0	1/1:1,14:14:36.07:430,36,0	1/1:1,13:13:36.11:452,36,0	1/1:0,17:17:33.10:414,33,0	1/1:1,13:14:33.08:397,33,0	0/1:1,13:14:12.87:346,0,13	1/1:1,43:44:96.30:1199,96,0	1/1:1,22:23:39.08:464,39,0	0/0:17,0:11:33.11:0,33,508	0/0:32,0:31:87.12:0,87,1253	0/0:18,0:18:54.15:0,54,798	1/1:7,17:24:2.71:476,3,0	1/1:4,24:27:60.17:736,60,0	1/1:0,21:21:51.16:645,51,0	0/0:17,0:16:45.14:0,45,682	1/1:11,16:26:52.25:707,52,0	1/1:0,20:20:54.17:671,54,0	1/1:0,17:17:39.12:492,39,0
chr10	12294366	.	CT	C	3770.17	PASS	AB=1.000;AC=38;AF=0.679;AN=56;BaseQRankSum=13.793;DP=643;FS=17.633;HRun=10;HaplotypeScore=141.7540;InbreedingCoeff=0.7921;MQ=54.58;MQ0=21;MQRankSum=-1.258;QD=8.65;ReadPosRankSum=6.577;VQSLOD=0.5249;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,1:40:73.02:0,73,998	1/1:12,0:11:1.94:60,2,0	0/0:23,0:10:26.67:0,27,220	0/0:29,0:6:14.92:0,15,137	1/1:38,0:39:52.52:327,53,0	1/1:3,16:19:44.97:391,45,0	1/1:2,20:22:61.06:505,61,0	0/0:33,0:31:80.72:0,81,839	1/1:19,0:18:18.50:147,19,0	1/1:20,0:17:10.24:97,10,0	1/1:17,0:17:28.44:123,28,0	1/1:14,0:14:27.29:119,27,0	0/1:15,0:15:5.03:117,0,5	1/1:16,0:16:29.25:123,29,0	1/1:16,0:16:7.80:102,8,0	1/1:12,0:13:14.21:83,14,0	1/1:45,0:45:63.23:355,63,0	1/1:23,0:23:13.25:130,13,0	0/0:17,0:12:27.07:0,27,299	0/0:27,0:29:75.19:0,75,821	0/0:17,0:17:19.63:0,20,402	1/1:19,0:21:37.92:184,38,0	1/1:32,1:32:13.13:209,13,0	1/1:22,0:22:27.82:160,28,0	0/0:18,0:17:48.12:0,48,525	0/1:27,0:26:37.48:152,0,37	1/1:21,0:20:49.06:234,49,0	1/1:17,0:17:34.95:152,35,0
chr10	12295079	.	G	GCCCC	2010.78	PASS	AB=0.833;AC=29;AF=0.537;AN=54;BaseQRankSum=9.282;DP=413;FS=6.813;HRun=0;HaplotypeScore=85.7946;InbreedingCoeff=0.7228;MQ=67.44;MQ0=5;MQRankSum=-5.892;QD=14.16;ReadPosRankSum=-2.315;VQSLOD=2.1827;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,111,2272	./.	0/0:38,0:34:99:0,99,1778	0/0:27,0:23:55.73:0,56,1092	1/1:14,1:13:5.47:84,5,0	0/0:13,0:13:39.13:0,39,805	0/0:23,0:23:66.21:0,66,1310	0/0:21,0:21:63.22:0,63,1280	1/1:5,3:6:3.90:55,4,0	1/1:3,2:5:6.49:151,6,0	0/0:4,2:5:2.24:0,2,5	1/1:9,1:11:10.01:155,10,0	1/1:2,2:5:2.54:73,3,0	1/1:5,1:4:8.52:161,9,0	1/1:2,2:9:7.62:193,8,0	1/1:4,1:4:9.01:124,9,0	1/1:4,7:13:13.95:293,14,0	1/1:7,0:7:3.65:33,4,0	0/0:22,0:21:63.18:0,63,1227	0/0:25,0:25:69.22:0,69,1389	0/0:36,0:36:99:0,105,2129	1/1:2,0:8:18.24:232,18,0	1/1:4,3:9:13.53:171,14,0	1/1:5,12:17:13.74:245,14,0	0/0:17,0:17:48.11:0,48,901	0/1:8,1:9:8.62:125,0,9	1/1:2,5:10:4.80:111,5,0	0/0:2,0:2:0.94:0,1,2
chr10	12295266	.	C	CAGG	8814.06	PASS	AB=0.931;AC=38;AF=0.679;AN=56;BaseQRankSum=-7.653;DP=506;FS=17.768;HRun=0;HaplotypeScore=80.5079;InbreedingCoeff=0.7932;MQ=71.43;MQ0=6;MQRankSum=-12.256;QD=28.90;ReadPosRankSum=0.249;VQSLOD=3.0514;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,111,1833	1/1:0,7:6:6.02:138,6,0	0/1:48,0:36:5.82:6,0,917	0/1:32,0:30:99:191,0,727	1/1:1,17:14:27.09:588,27,0	0/0:16,0:16:42.13:0,42,689	0/0:17,0:17:51.17:0,51,859	0/0:37,0:33:96.31:0,96,1591	1/1:1,17:14:33.11:757,33,0	1/1:2,17:17:42.12:895,42,0	1/1:0,9:8:15.05:282,15,0	1/1:1,12:11:24.08:552,24,0	1/1:0,6:7:5.94:138,6,0	1/1:3,7:9:15.01:284,15,0	1/1:1,9:9:21.07:483,21,0	1/1:2,14:16:39.13:897,39,0	1/1:1,7:7:18.06:414,18,0	1/1:1,4:5:12.04:276,12,0	0/0:26,0:23:66.21:0,66,1090	0/0:18,0:18:51.13:0,51,831	0/0:34,0:33:87.26:0,87,1404	1/1:1,15:15:27.09:583,27,0	1/1:0,12:10:18.06:413,18,0	1/1:2,11:9:15.05:343,15,0	0/0:13,0:13:39.13:0,39,665	1/1:2,15:15:39.13:896,39,0	1/1:2,9:10:24.08:549,24,0	1/1:3,5:7:6.02:128,6,0
chr10	12296116	.	CG	C	511.40	PASS	AC=8;AF=0.400;AN=20;BaseQRankSum=-1.307;DP=195;FS=2.055;HRun=2;HaplotypeScore=59.1297;InbreedingCoeff=0.9113;MQ=63.62;MQ0=11;MQRankSum=-3.272;QD=11.89;ReadPosRankSum=-2.004;VQSLOD=1.4454;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:60.35:0,60,550	./.	0/0:31,0:8:7.56:0,8,59	0/0:48,0:17:13.65:0,14,109	./.	0/0:11,0:11:20.72:0,21,165	0/0:14,0:14:32.29:0,32,231	1/1:8,0:8:21.61:135,22,0	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	1/1:20,0:19:39.85:313,40,0	1/1:0,5:5:5.91:38,6,0	1/1:9,0:9:18.31:141,18,0	./.	./.	./.	0/0:16,0:16:36.41:0,36,338	./.	./.	./.
chr10	12296380	.	AG	A	7981.23	PASS	AB=0.586;AC=32;AF=0.571;AN=56;BaseQRankSum=13.748;DP=439;FS=20.033;HRun=1;HaplotypeScore=80.6650;InbreedingCoeff=0.6794;MQ=50.25;MQ0=0;MQRankSum=-8.573;QD=32.58;ReadPosRankSum=-0.160;VQSLOD=3.1255;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:75.23:0,75,1165	1/1:0,3:3:9.03:124,9,0	0/0:17,0:16:25.54:0,26,600	0/0:17,0:11:30.09:0,30,440	1/1:1,16:17:42.10:552,42,0	0/0:26,0:26:75.26:0,75,1196	0/0:18,0:17:45.15:0,45,719	0/0:24,0:22:63.15:0,63,877	1/1:4,20:23:17.79:789,18,0	0/1:2,13:15:42.39:421,0,42	1/1:0,9:9:21.03:271,21,0	1/1:1,13:14:36.08:479,36,0	0/1:6,13:18:6.70:463,0,7	1/1:2,17:18:5.31:597,5,0	0/1:3,6:9:26.30:229,0,26	1/1:1,14:15:42.14:585,42,0	1/1:2,16:18:51.14:676,51,0	1/1:5,10:15:36:453,36,0	0/0:15,0:15:42.14:0,42,669	0/0:17,1:18:9.48:0,9,712	0/0:13,0:12:36.12:0,36,575	1/1:0,13:13:36.12:501,36,0	1/1:0,8:8:24.08:333,24,0	0/1:3,5:8:32.88:133,0,33	0/0:19,0:19:57.19:0,57,910	1/1:1,14:13:36.12:502,36,0	1/1:2,19:21:57.05:746,57,0	1/1:0,3:3:9.03:125,9,0
chr10	12296395	.	C	CAA	5997.80	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=13.285;DP=428;FS=25.837;HRun=8;HaplotypeScore=104.4270;InbreedingCoeff=0.9255;MQ=47.69;MQ0=1;MQRankSum=-11.984;QD=23.71;ReadPosRankSum=-0.580;VQSLOD=2.2494;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:49.84:0,50,517	1/1:1,2:3:9.03:125,9,0	0/0:11,0:11:21.04:0,21,233	0/0:11,0:8:6.90:0,7,68	1/1:11,5:15:16.29:198,16,0	0/0:28,0:28:57.15:0,57,635	0/0:16,0:17:47.87:0,48,513	0/0:20,0:20:40.65:0,41,439	1/1:9,16:25:53.91:651,54,0	1/1:7,12:19:20.92:380,21,0	1/1:3,3:6:6.02:76,6,0	1/1:5,12:17:42.13:537,42,0	1/1:8,5:12:12.22:185,12,0	1/1:5,9:14:28.53:348,29,0	1/1:4,8:12:27.04:316,27,0	1/1:6,10:16:32.27:365,32,0	1/1:5,9:14:29.83:337,30,0	1/1:7,10:17:36.05:442,36,0	0/0:18,0:17:48.03:0,48,519	0/0:15,1:16:3.70:0,4,383	0/0:9,0:9:24.06:0,24,268	1/1:3,8:11:24.06:288,24,0	1/1:3,7:10:21.07:263,21,0	1/1:2,5:7:15.05:192,15,0	0/0:21,0:21:57.77:0,58,610	1/1:7,10:15:29.68:359,30,0	1/1:6,21:27:55.75:756,56,0	1/1:1,7:6:15.01:178,15,0
chr10	12296403	.	A	AT	4015.94	PASS	AB=0.915;AC=39;AF=0.696;AN=56;BaseQRankSum=14.308;DP=406;FS=12.438;HRun=2;HaplotypeScore=92.7672;InbreedingCoeff=0.7006;MQ=47.18;MQ0=3;MQRankSum=-13.083;QD=14.14;ReadPosRankSum=0.711;VQSLOD=1.9227;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,2:21:6.95:0,7,499	1/1:4,0:4:6.42:43,6,0	0/0:12,0:10:13.39:0,13,234	0/1:10,0:6:9.42:9,0,60	1/1:8,0:7:15.71:103,16,0	0/0:20,3:23:60.18:0,60,728	0/0:19,0:18:51:0,51,579	0/1:19,5:23:49.89:50,0,499	1/1:22,1:22:53.66:402,54,0	1/1:18,3:21:47.75:403,48,0	1/1:5,0:5:5.95:42,6,0	1/1:16,1:17:45.04:314,45,0	1/1:6,5:10:17.90:148,18,0	1/1:12,1:13:38.75:301,39,0	1/1:11,0:11:26.84:204,27,0	1/1:13,1:14:34.05:249,34,0	1/1:13,0:13:29.88:244,30,0	1/1:15,0:15:35.30:254,35,0	0/0:22,1:19:54.06:0,54,615	0/0:16,0:16:26.73:0,27,500	0/0:8,0:8:24.08:0,24,295	1/1:10,0:9:20.83:147,21,0	1/1:10,0:8:20.84:148,21,0	1/1:5,0:5:14.89:107,15,0	0/1:20,2:22:16.26:16,0,642	1/1:12,1:11:29.81:219,30,0	1/1:22,5:27:65.50:490,65,0	1/1:8,0:6:17.83:123,18,0
chr10	12296405	.	T	TC	6587.98	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=14.033;DP=410;FS=18.172;HRun=0;HaplotypeScore=81.6918;InbreedingCoeff=0.9559;MQ=45.57;MQ0=4;MQRankSum=-12.264;QD=28.64;ReadPosRankSum=3.044;VQSLOD=3.6265;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:27.88:0,28,631	1/1:2,2:4:8.99:98,9,0	0/0:12,0:9:26.85:0,27,309	0/0:13,0:7:14.32:0,14,134	1/1:2,6:7:15.05:192,15,0	0/0:23,0:23:60.20:0,60,836	0/0:19,0:18:54.16:0,54,714	0/0:25,0:24:44.98:0,45,750	1/1:1,20:20:54.17:690,54,0	1/1:6,14:20:47.90:559,48,0	1/1:2,3:5:6.02:76,6,0	1/1:4,13:17:45.14:554,45,0	1/1:7,6:12:18.04:211,18,0	1/1:3,10:13:39.09:475,39,0	1/1:0,11:11:27.08:334,27,0	1/1:3,11:14:36.04:434,36,0	1/1:0,14:14:30.09:385,30,0	1/1:1,17:18:36.05:442,36,0	0/0:22,0:18:54.16:0,54,736	0/0:15,1:16:9.93:0,10,584	0/0:8,0:8:24.08:0,24,336	1/1:1,8:8:21.06:256,21,0	1/1:2,8:8:21.04:253,21,0	1/1:0,5:5:15.05:191,15,0	0/0:23,0:23:19.65:0,20,784	1/1:1,12:11:30.10:394,30,0	1/1:5,22:27:66.10:813,66,0	1/1:1,7:6:18.06:231,18,0
chr10	12296758	.	T	TCG	2099.61	PASS	AB=1.000;AC=35;AF=0.625;AN=56;BaseQRankSum=6.745;DP=420;FS=10.639;HRun=0;HaplotypeScore=109.2710;InbreedingCoeff=0.7862;MQ=70.08;MQ0=5;MQRankSum=-0.300;QD=8.71;ReadPosRankSum=2.308;VQSLOD=2.6430;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:51.06:0,51,560	1/1:4,0:4:8.77:52,9,0	0/0:33,0:20:23.81:0,24,420	0/0:15,0:11:14.74:0,15,239	1/1:11,0:11:14.25:92,14,0	0/0:15,0:14:29.91:0,30,314	0/0:24,0:24:48.11:0,48,702	0/0:14,0:14:36.01:0,36,449	1/1:19,0:20:40.82:254,41,0	1/1:16,0:16:36.19:299,36,0	1/1:16,0:16:11.60:145,12,0	1/1:8,1:10:1.42:108,1,0	1/1:7,1:8:4.52:83,5,0	1/1:10,1:11:4.79:31,5,0	1/1:15,0:15:14.97:199,15,0	1/1:11,0:9:5:39,5,0	1/1:22,0:23:42.44:223,42,0	1/1:14,1:15:11.79:78,12,0	0/0:11,0:11:30.03:0,30,356	0/0:12,0:12:23.93:0,24,263	0/0:17,0:17:35.66:0,36,547	1/1:13,0:11:23.16:150,23,0	1/1:11,0:11:5.74:37,6,0	0/1:17,0:16:2.71:132,0,3	0/0:16,0:16:41.95:0,42,478	1/1:15,0:15:30.54:233,31,0	1/1:14,0:15:16.23:99,16,0	1/1:8,0:6:0.42:53,0,0
chr10	12296760	.	G	GA	3190.62	PASS	AB=0.700;AC=35;AF=0.625;AN=56;BaseQRankSum=6.492;DP=435;FS=12.244;HRun=0;HaplotypeScore=98.8622;InbreedingCoeff=0.8106;MQ=68.93;MQ0=6;MQRankSum=-1.866;QD=12.04;ReadPosRankSum=4.777;VQSLOD=4.1552;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:23.95:0,24,235	1/1:2,3:5:9:119,9,0	0/0:37,0:21:30.59:0,31,320	0/0:16,0:11:5.96:0,6,160	0/1:8,6:14:1.06:35,0,1	0/0:12,0:10:11.97:0,12,96	0/0:23,0:23:42.25:0,42,318	0/0:16,0:16:23.96:0,24,227	1/1:9,15:24:16.70:379,17,0	1/1:3,9:12:22.17:203,22,0	1/1:8,9:17:2.10:74,2,0	1/1:6,5:11:15.89:198,16,0	1/1:4,5:9:8.97:101,9,0	1/1:6,6:14:11.63:111,12,0	1/1:6,7:13:24.50:290,25,0	1/1:2,8:8:9.03:120,9,0	1/1:9,21:29:42.07:554,42,0	1/1:4,10:14:5.41:79,5,0	0/0:8,0:8:11.97:0,12,157	0/0:10,0:10:9:0,9,83	0/0:17,0:17:32.97:0,33,319	1/1:2,12:11:18.05:232,18,0	1/1:2,10:12:3:38,3,0	1/1:13,7:19:18.81:270,19,0	0/0:13,0:13:26.93:0,27,253	1/1:7,12:18:22.13:209,22,0	1/1:5,12:17:19.83:227,20,0	1/1:3,5:6:11.27:158,11,0
chr10	12297263	.	GC	G	12352.55	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=11.486;DP=536;FS=8.739;HRun=1;HaplotypeScore=57.6349;InbreedingCoeff=0.9987;MQ=73.34;MQ0=0;MQRankSum=0.489;QD=38.48;ReadPosRankSum=4.642;VQSLOD=5.0150;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,1:28:53.96:0,54,1209	1/1:0,9:9:27.09:378,27,0	0/0:21,0:21:57.15:0,57,839	0/0:10,0:10:19.65:0,20,285	1/1:1,22:23:66.22:922,66,0	0/0:17,0:17:51.17:0,51,815	0/0:18,0:18:51.17:0,51,815	0/0:27,0:27:81.25:0,81,1249	1/1:0,27:27:75.25:1048,75,0	1/1:0,17:17:51.16:697,51,0	1/1:0,22:22:60.20:839,60,0	1/1:0,16:16:42.14:587,42,0	1/1:0,19:19:48.16:669,48,0	1/1:0,17:17:48.16:671,48,0	1/1:0,13:13:33.11:461,33,0	1/1:0,13:13:33.11:461,33,0	1/1:0,25:25:72.24:1007,72,0	1/1:0,10:10:27.09:377,27,0	0/0:21,0:21:63.17:0,63,979	0/0:29,0:29:87.28:0,87,1364	0/0:17,0:17:47.65:0,48,739	1/1:0,17:17:42.14:587,42,0	1/1:0,22:22:60.20:839,60,0	1/1:1,10:11:30.10:419,30,0	0/0:27,0:27:81.26:0,81,1267	1/1:0,19:19:57.19:796,57,0	1/1:0,17:17:42.14:587,42,0	1/1:0,24:24:72.24:1006,72,0
chr10	12297874	.	TGA	T	332.30	PASS	AB=0.738;AC=22;AF=0.524;AN=42;BaseQRankSum=5.581;DP=451;FS=27.916;HRun=0;HaplotypeScore=78.3707;InbreedingCoeff=0.6282;MQ=63.24;MQ0=48;MQRankSum=-4.095;QD=1.97;ReadPosRankSum=-2.548;VQSLOD=-0.2079;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,3:38:74.57:0,75,1703	./.	0/0:91,0:25:58.26:0,58,864	0/1:118,3:32:8.06:8,0,681	./.	0/0:14,0:14:30.10:0,30,574	0/0:22,0:22:33.11:0,33,634	0/0:38,0:38:99:0,108,2115	1/1:0,2:2:3.01:37,3,0	1/1:3,0:2:5.91:38,6,0	1/1:1,5:5:2.99:35,3,0	./.	./.	0/1:0,4:4:0:0,0,0	1/1:0,3:3:3.01:37,3,0	1/1:0,6:6:2.94:18,3,0	./.	1/1:2,1:3:6.02:77,6,0	0/0:18,0:17:48.16:0,48,898	0/0:18,0:17:26.93:0,27,504	0/0:20,0:17:39.60:0,40,756	./.	1/1:0,5:5:3.01:35,3,0	./.	0/0:11,0:11:27.09:0,27,548	1/1:0,4:4:11.98:130,12,0	1/1:1,4:5:2.84:14,3,0	1/1:0,7:7:5.95:55,6,0
chr10	12297903	.	CTCTG	C	86.61	PASS	AB=0.987;AC=10;AF=0.417;AN=24;BaseQRankSum=4.270;DP=297;FS=2.485;HRun=0;HaplotypeScore=62.0719;InbreedingCoeff=-0.0187;MQ=54.08;MQ0=33;MQRankSum=-2.583;QD=0.49;ReadPosRankSum=1.344;VQSLOD=1.0224;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:45:99:0,102,1952	./.	0/1:29,0:8:2.23:2,0,108	0/1:63,0:13:3.55:4,0,117	./.	0/0:14,0:14:12.02:0,12,135	0/0:27,0:27:14.79:0,15,191	0/1:26,0:25:34.78:35,0,140	./.	1/1:1,1:1:3.01:57,3,0	./.	./.	./.	./.	./.	./.	1/1:0,1:1:2.97:20,3,0	./.	0/1:15,0:15:57.13:57,0,132	0/1:17,0:16:0.11:0,0,27	0/1:18,1:16:9.21:9,0,73	./.	./.	./.	0/0:11,0:11:27.09:0,27,503	./.	./.	./.
chr10	12297915	.	CTCTG	C	283.59	PASS	AB=0.934;AC=12;AF=0.500;AN=24;BaseQRankSum=4.485;DP=278;FS=6.927;HRun=0;HaplotypeScore=57.6144;InbreedingCoeff=-0.1964;MQ=55.34;MQ0=24;MQRankSum=-1.990;QD=1.45;ReadPosRankSum=-0.786;VQSLOD=0.4256;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:24.44:0,24,1036	./.	0/1:18,0:8:12.12:12,0,26	0/1:55,0:9:1.75:2,0,29	./.	1/1:1,11:12:6.02:101,6,0	0/1:2,26:28:25.15:93,0,25	0/1:24,0:23:21.22:21,0,91	./.	1/1:3,0:2:5.65:32,6,0	./.	./.	./.	./.	./.	./.	./.	0/1:2,0:2:0:0,0,0	0/1:14,0:14:61.09:61,0,128	0/1:18,0:17:30.21:55,0,30	0/1:18,0:15:7.47:7,0,88	./.	./.	./.	0/0:14,0:14:39.05:0,39,441	./.	./.	./.
chr10	12297917	.	CTG	C	468.54	PASS	AB=0.974;AC=12;AF=0.500;AN=24;BaseQRankSum=4.036;DP=275;FS=6.640;HRun=0;HaplotypeScore=49.7420;InbreedingCoeff=-0.1816;MQ=51.56;MQ0=24;MQRankSum=-2.172;QD=2.47;ReadPosRankSum=-2.209;VQSLOD=0.1762;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:48:47.52:0,48,1063	./.	0/1:16,0:6:6.72:7,0,35	0/1:50,1:7:0.83:1,0,48	./.	1/1:13,0:13:7.80:51,8,0	0/1:27,1:28:26.28:26,0,44	0/1:23,1:23:61.68:193,0,62	./.	1/1:3,0:2:5.96:44,6,0	./.	./.	./.	./.	./.	./.	./.	0/1:2,0:2:0:0,0,0	0/1:13,1:14:80.83:91,0,81	0/1:20,0:19:21.23:107,0,21	0/1:18,1:15:50.08:50,0,77	./.	./.	./.	0/0:15,0:15:24.32:0,24,530	./.	./.	./.
chr10	12299171	.	GAAC	G	8462.84	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=15.144;DP=568;FS=3.905;HRun=0;HaplotypeScore=152.6259;InbreedingCoeff=0.9374;MQ=56.68;MQ0=3;MQRankSum=-11.023;QD=25.64;ReadPosRankSum=5.542;VQSLOD=4.8825;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:37:99:0,108,2010	1/1:0,6:6:9.03:118,9,0	0/0:22,0:19:45.09:0,45,723	0/0:30,0:24:57.12:0,57,889	1/1:7,11:18:44.88:505,45,0	0/0:12,0:12:21.02:0,21,215	0/0:23,0:23:31.90:0,32,278	0/0:22,0:22:45.13:0,45,790	1/1:10,24:34:95.61:1118,96,0	1/1:14,3:16:36.01:385,36,0	1/1:7,2:9:17.42:158,17,0	1/1:9,11:20:45.08:538,45,0	1/1:9,10:19:53.66:630,54,0	1/1:4,13:17:23.26:405,23,0	1/1:12,18:30:66.02:798,66,0	1/1:1,24:25:60.18:770,60,0	1/1:13,7:20:33.09:507,33,0	1/1:2,14:16:9.81:340,10,0	0/0:21,0:21:51.16:0,51,1008	0/0:15,0:15:45.13:0,45,861	0/0:31,0:32:79.03:0,79,1499	1/1:3,9:12:20.98:273,21,0	1/1:3,12:15:5.24:48,5,0	1/1:5,15:20:6.10:257,6,0	0/0:21,0:21:60.04:0,60,917	1/1:7,12:19:53.73:672,54,0	1/1:3,23:26:57.66:780,58,0	1/1:1,6:7:7.67:162,8,0
chr10	12299188	.	GCAGCAA	G	11185.87	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=14.703;DP=572;FS=2.465;HRun=0;HaplotypeScore=169.7486;InbreedingCoeff=0.9664;MQ=50.14;MQ0=6;MQRankSum=-11.315;QD=31.60;ReadPosRankSum=5.306;VQSLOD=4.4096;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:36:94.13:0,94,2594	1/1:6,2:8:14.99:202,15,0	0/0:22,0:15:26.73:0,27,524	0/0:43,0:26:56.71:0,57,848	1/1:12,6:18:30:411,30,0	1/1:3,12:15:18.06:353,18,0	1/1:3,22:25:27.09:574,27,0	0/0:29,0:28:75.21:0,75,1887	1/1:9,23:32:69.11:1108,69,0	1/1:10,3:12:27.04:346,27,0	1/1:3,7:10:12.04:207,12,0	1/1:4,11:15:39.11:710,39,0	1/1:4,14:18:36.10:610,36,0	1/1:6,9:15:42.04:638,42,0	1/1:14,15:29:54.09:922,54,0	1/1:4,19:23:60.19:1098,60,0	1/1:7,11:21:29.95:386,30,0	1/1:13,3:16:26.68:401,27,0	0/0:22,0:22:45.09:0,45,1237	0/0:20,0:19:42.10:0,42,1003	0/0:31,0:31:61.05:0,61,1563	1/1:7,2:9:14.99:180,15,0	1/1:7,2:9:5.98:99,6,0	1/1:12,6:19:30.09:480,30,0	0/0:14,0:14:21.04:0,21,494	1/1:5,18:23:59.93:895,60,0	1/1:12,17:29:78.02:1375,78,0	1/1:5,2:7:14.82:193,15,0
chr10	12299191	.	GCAA	G	6222.51	PASS	AB=1.000;AC=37;AF=0.661;AN=56;BaseQRankSum=16.559;DP=570;FS=0.770;HRun=0;HaplotypeScore=155.5889;InbreedingCoeff=0.7470;MQ=48.86;MQ0=6;MQRankSum=-12.765;QD=17.93;ReadPosRankSum=6.865;VQSLOD=4.1009;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:36:99:0,106,2101	1/1:8,0:8:17.34:137,17,0	0/0:24,0:16:41.25:0,41,641	0/0:45,0:25:70.84:0,71,1031	1/1:11,7:18:30.35:231,30,0	0/1:14,0:14:72.13:97,0,72	0/1:24,0:24:13.16:171,0,13	0/0:30,0:29:87.25:0,87,1551	1/1:32,0:32:64.45:598,64,0	1/1:5,8:12:21.43:282,21,0	1/1:8,0:8:11.82:120,12,0	1/1:15,0:15:36.49:405,36,0	1/1:18,0:18:30.46:320,30,0	1/1:15,0:15:40.72:353,41,0	1/1:18,9:27:55.59:540,56,0	1/1:23,0:23:61:631,61,0	1/1:21,0:21:27.10:200,27,0	0/1:16,0:16:11.70:221,0,12	0/0:23,0:23:66.15:0,66,1164	0/0:21,0:20:54.12:0,54,973	0/0:30,0:30:81.96:0,82,1446	1/1:9,0:9:13.74:84,14,0	1/1:11,0:11:8.92:72,9,0	1/1:19,0:19:35.19:313,35,0	0/0:13,0:13:39.04:0,39,606	1/1:23,0:23:48.69:524,49,0	1/1:28,0:28:77.62:819,78,0	1/1:5,0:5:12.37:104,12,0
chr10	12301506	.	CCCCCT	C	13440.57	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=14.407;DP=576;FS=1.542;HRun=0;HaplotypeScore=129.5012;InbreedingCoeff=0.9887;MQ=75.75;MQ0=0;MQRankSum=-9.858;QD=40.85;ReadPosRankSum=7.352;VQSLOD=4.2136;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,129,3851	1/1:1,8:9:21.07:426,21,0	0/0:31,0:31:69.23:0,69,1799	0/0:17,0:17:42.12:0,42,1139	1/1:1,22:23:33.11:667,33,0	0/0:15,0:15:45.15:0,45,1322	0/0:22,0:22:54.19:0,54,1617	0/0:25,0:25:45.15:0,45,1344	1/1:1,25:26:50.79:1034,51,0	1/1:2,18:20:51.14:961,51,0	1/1:2,17:19:36.12:730,36,0	1/1:1,13:14:27.09:547,27,0	1/1:5,24:29:60.21:1217,60,0	1/1:0,20:20:51.18:1035,51,0	1/1:0,17:17:42.14:852,42,0	1/1:3,14:17:33.11:670,33,0	1/1:6,7:13:18.06:365,18,0	1/1:0,11:11:24.08:487,24,0	0/0:17,0:17:51.16:0,51,1467	0/0:26,0:26:72.25:0,72,2179	0/0:30,0:30:84.29:0,84,2541	1/1:0,12:12:24.08:487,24,0	1/1:3,21:24:32.97:628,33,0	1/1:2,19:21:42.02:852,42,0	0/0:16,0:16:45.15:0,45,1362	1/1:5,15:20:45.15:901,45,0	1/1:3,27:30:69.24:1399,69,0	1/1:1,3:4:9.03:183,9,0
chr10	12302237	.	GT	G	16844.64	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=17.179;DP=713;FS=0.000;HRun=1;HaplotypeScore=87.6978;InbreedingCoeff=0.9998;MQ=67.41;MQ0=0;MQRankSum=0.923;QD=39.73;ReadPosRankSum=6.804;VQSLOD=4.5890;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,129,2037	1/1:0,14:14:36.12:504,36,0	0/0:26,0:26:78.26:0,78,1215	0/0:24,0:24:72.23:0,72,1085	1/1:0,25:25:75.21:1024,75,0	0/0:27,0:27:81.28:0,81,1285	0/0:21,0:21:63.21:0,63,994	0/0:37,0:37:99:0,111,1755	1/1:0,29:29:87.29:1212,87,0	1/1:1,22:23:69.23:954,69,0	1/1:0,24:24:72.24:1004,72,0	1/1:0,21:21:51.17:709,51,0	1/1:0,24:24:63.21:881,63,0	1/1:0,20:20:54.18:755,54,0	1/1:0,32:32:93.31:1298,93,0	1/1:0,16:16:45.15:629,45,0	1/1:0,34:34:99:1385,99,0	1/1:0,13:13:36.12:502,36,0	0/0:24,0:24:72.24:0,72,1131	0/0:28,0:28:84.28:0,84,1314	0/0:33,0:33:99:0,99,1579	1/1:0,21:21:57.19:794,57,0	1/1:0,28:28:75.25:1044,75,0	1/1:0,24:24:72.24:1007,72,0	0/0:24,0:24:72.25:0,72,1149	1/1:0,32:32:96.32:1339,96,0	1/1:0,35:35:99:1426,102,0	1/1:0,9:9:27.09:378,27,0
chr10	12302835	.	AC	A	2397.52	PASS	AB=0.958;AC=40;AF=0.714;AN=56;BaseQRankSum=13.784;DP=646;FS=3.450;HRun=9;HaplotypeScore=163.0000;InbreedingCoeff=0.8432;MQ=70.71;MQ0=0;MQRankSum=-2.833;QD=5.23;ReadPosRankSum=7.907;VQSLOD=-0.3706;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,102,1148	1/1:11,0:11:15.81:46,16,0	0/0:20,0:20:33.36:0,33,406	0/0:30,0:27:14.83:0,15,535	1/1:32,0:32:31.23:118,31,0	1/1:3,15:18:45.01:410,45,0	1/1:2,23:25:57.03:521,57,0	0/0:27,0:27:36.03:0,36,647	1/1:25,0:25:25.58:93,26,0	1/1:28,0:28:45.02:137,45,0	1/1:15,0:15:23.96:68,24,0	1/1:18,0:18:26.54:89,27,0	1/1:19,0:19:27.71:80,28,0	1/1:15,0:15:26.48:77,26,0	1/1:17,0:17:28.51:83,29,0	1/1:19,0:19:26.75:90,27,0	1/1:24,0:24:19.01:82,19,0	0/1:7,0:7:1.30:9,0,1	0/1:20,2:22:9.91:10,0,374	0/0:27,0:27:72.20:0,72,818	0/0:26,1:27:44.65:0,45,715	1/1:40,0:40:48.57:168,49,0	1/1:36,0:36:48.86:142,49,0	1/1:24,0:24:30.06:87,30,0	0/0:20,0:20:57.12:0,57,632	1/1:31,0:31:43.68:135,44,0	1/1:29,0:29:48.89:142,49,0	1/1:3,0:3:4.06:12,4,0
chr10	12302841	.	CCCCA	C	18124.90	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=7.767;DP=645;FS=1.372;HRun=0;HaplotypeScore=139.7640;InbreedingCoeff=0.9886;MQ=71.07;MQ0=0;MQRankSum=-5.510;QD=45.89;ReadPosRankSum=6.803;VQSLOD=5.3429;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,108,2879	1/1:0,10:10:24.08:459,24,0	0/0:22,0:21:62.33:0,62,1158	0/0:30,0:26:67.56:0,68,1336	1/1:0,33:33:75.13:1365,75,0	0/0:17,0:17:48.15:0,48,694	0/0:25,0:25:60.20:0,60,888	0/0:25,0:25:75.21:0,75,1768	1/1:0,22:22:57.19:1072,57,0	1/1:1,30:31:93.26:1627,93,0	1/1:1,16:17:39.08:706,39,0	1/1:0,18:18:54.18:1009,54,0	1/1:0,17:17:42.14:802,42,0	1/1:0,17:17:39.13:748,39,0	1/1:0,16:16:45.09:825,45,0	1/1:0,19:19:54.18:1017,54,0	1/1:0,26:26:57.13:1033,57,0	1/1:0,7:7:15.02:232,15,0	0/0:20,0:20:60.17:0,60,1287	0/0:26,0:26:78.25:0,78,1996	0/0:27,0:27:77.06:0,77,1820	1/1:0,41:41:99:1871,102,0	1/1:1,34:35:75.16:1426,75,0	1/1:0,25:25:48.11:882,48,0	0/0:22,0:22:66.20:0,66,1634	1/1:0,29:29:87.23:1534,87,0	1/1:0,29:29:72.25:1382,72,0	1/1:0,3:3:8.99:135,9,0
chr10	12303948	.	C	CA	12565.02	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=15.991;DP=587;FS=1.483;HRun=4;HaplotypeScore=96.5144;InbreedingCoeff=0.9993;MQ=67.77;MQ0=2;MQRankSum=0.659;QD=34.90;ReadPosRankSum=4.033;VQSLOD=4.8279;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:78.17:0,78,859	1/1:1,10:11:30.10:410,30,0	0/0:14,0:15:37.37:0,37,381	0/0:18,0:16:36.08:0,36,388	1/1:1,28:29:75.14:977,75,0	0/0:23,0:23:66.19:0,66,748	0/0:22,0:22:60.14:0,60,661	0/0:29,0:24:48.13:0,48,537	1/1:0,26:26:69.23:944,69,0	1/1:1,22:23:66.18:855,66,0	1/1:0,21:21:60.03:754,60,0	1/1:0,11:11:33.11:451,33,0	1/1:2,16:18:48.16:656,48,0	1/1:0,15:15:33.11:451,33,0	1/1:1,9:10:24.08:328,24,0	1/1:1,16:17:45.15:616,45,0	1/1:1,21:22:54.18:738,54,0	1/1:0,25:24:69.23:943,69,0	0/0:18,0:18:39.09:0,39,430	0/0:28,0:28:81.23:0,81,918	0/0:17,0:17:51.13:0,51,570	1/1:0,21:21:63.21:861,63,0	1/1:2,13:15:30.10:410,30,0	1/1:4,10:13:30.10:410,30,0	0/0:28,0:28:81.22:0,81,910	1/1:2,18:20:54.18:738,54,0	1/1:5,41:46:99:1503,111,0	1/1:1,15:16:39.12:518,39,0
chr10	12304684	.	TA	T	186.47	PASS	AC=12;AF=0.375;AN=32;BaseQRankSum=5.072;DP=279;FS=26.465;HRun=1;HaplotypeScore=57.6444;InbreedingCoeff=0.7493;MQ=76.16;MQ0=3;MQRankSum=-4.962;QD=11.65;ReadPosRankSum=0.277;VQSLOD=0.3328;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:63.21:0,63,998	./.	0/0:24,0:20:60.19:0,60,910	0/0:31,1:26:78.23:0,78,1172	1/1:0,7:5:6.02:84,6,0	0/0:27,0:27:81.28:0,81,1292	0/0:18,0:18:54.18:0,54,860	0/0:31,0:31:93.27:0,93,1437	./.	1/1:0,1:1:2.96:19,3,0	1/1:0,3:3:6.02:84,6,0	./.	./.	./.	./.	./.	./.	./.	0/0:24,0:24:72.22:0,72,1105	0/0:36,0:36:99:0,108,1727	0/0:25,0:24:69.24:0,69,1099	1/1:0,2:1:3.01:42,3,0	1/1:0,2:2:3.01:42,3,0	./.	0/0:20,2:22:18.39:0,18,869	1/1:0,1:1:3.01:42,3,0	./.	./.
chr10	12305272	.	G	GA	132.55	PASS	AB=1.000;AC=17;AF=0.447;AN=38;BaseQRankSum=4.563;DP=227;FS=0.000;HRun=2;HaplotypeScore=27.5981;InbreedingCoeff=0.6786;MQ=96.05;MQ0=0;MQRankSum=-3.071;QD=10.20;ReadPosRankSum=-4.918;VQSLOD=-0.5090;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:87.24:0,87,1111	./.	0/0:20,0:20:57.18:0,57,735	0/0:22,0:22:57.17:0,57,725	./.	0/0:21,0:21:60.19:0,60,778	0/0:19,0:19:57.19:0,57,739	0/0:26,0:26:72.22:0,72,922	./.	1/1:1,0:1:2.90:16,3,0	./.	1/1:0,1:1:3.01:43,3,0	./.	0/1:1,0:1:0:0,0,0	1/1:0,1:1:3.01:44,3,0	./.	1/1:2,0:2:5.92:39,6,0	1/1:2,0:2:2.96:19,3,0	0/0:15,0:15:45.14:0,45,571	0/0:21,0:21:57.17:0,57,726	0/0:17,0:17:42.14:0,42,545	1/1:2,0:2:2.97:20,3,0	1/1:0,2:2:3.01:44,3,0	./.	0/0:19,0:19:57.19:0,57,740	./.	1/1:0,1:1:3.01:43,3,0	./.
chr10	12305406	.	T	TA	9514.82	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=9.485;DP=569;FS=7.545;HRun=8;HaplotypeScore=68.6635;InbreedingCoeff=0.9919;MQ=55.64;MQ0=15;MQRankSum=-0.522;QD=27.58;ReadPosRankSum=1.770;VQSLOD=5.5191;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:28:83.06:0,83,741	1/1:0,5:5:15.04:173,15,0	0/0:33,1:20:41.61:0,42,385	0/0:21,1:14:23.97:0,24,213	1/1:3,28:31:75.19:851,75,0	0/0:23,1:23:66.01:0,66,596	0/0:18,0:18:54.03:0,54,494	0/0:23,0:23:44.96:0,45,400	1/1:2,19:21:54.11:607,54,0	1/1:6,28:33:81.24:935,81,0	1/1:3,23:25:67.08:763,67,0	1/1:2,20:23:56.95:622,57,0	1/1:1,13:15:38.95:429,39,0	1/1:2,11:13:27.03:296,27,0	1/1:3,15:18:39.12:450,39,0	1/1:0,9:9:24.03:262,24,0	1/1:1,16:18:45.13:519,45,0	1/1:0,24:24:63.19:725,63,0	0/0:22,0:21:56.98:0,57,510	0/0:27,0:27:75.01:0,75,679	0/0:10,0:10:24.01:0,24,220	1/1:3,16:19:42.07:469,42,0	1/1:3,13:16:36.11:415,36,0	1/1:1,22:23:57.17:658,57,0	0/0:13,0:13:39.01:0,39,352	1/1:3,20:22:35.77:665,36,0	1/1:3,17:20:47.68:538,48,0	1/1:2,5:7:12.04:138,12,0
chr10	12307692	.	TG	T	1930.20	PASS	AB=0.625;AC=23;AF=0.639;AN=36;BaseQRankSum=-0.029;DP=415;FS=16.042;HRun=4;HaplotypeScore=31.3310;InbreedingCoeff=0.6275;MQ=20.71;MQ0=140;MQRankSum=-2.885;QD=13.22;ReadPosRankSum=0.495;VQSLOD=0.9461;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:7:9.03:0,9,121	1/1:2,2:3:6.02:72,6,0	./.	./.	1/1:6,13:14:21.02:235,21,0	0/0:21,0:7:6.02:0,6,84	0/0:19,0:1:3.01:0,3,42	0/0:33,0:1:2.99:0,3,24	./.	1/1:5,14:13:36.11:431,36,0	1/1:2,8:7:12.04:143,12,0	./.	./.	1/1:6,4:4:9.03:107,9,0	1/1:4,5:3:3.01:36,3,0	1/1:1,3:2:6.02:72,6,0	./.	1/1:8,4:3:6.02:72,6,0	./.	0/0:31,0:27:72.24:0,72,996	./.	0/1:6,9:10:17.92:189,0,18	1/1:4,8:8:18.06:215,18,0	./.	0/0:20,0:20:39.13:0,39,544	1/1:5,12:9:24.07:287,24,0	1/1:4,11:8:18.06:215,18,0	./.
chr10	12308040	.	TAA	T	1999.06	PASS	AB=0.775;AC=31;AF=0.596;AN=52;BaseQRankSum=5.335;DP=185;FS=4.699;HRun=3;HaplotypeScore=34.2327;InbreedingCoeff=0.6001;MQ=55.80;MQ0=5;MQRankSum=-6.249;QD=27.76;ReadPosRankSum=-2.449;VQSLOD=1.5976;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:51.17:0,51,948	1/1:0,2:1:3.01:46,3,0	0/1:12,0:9:9.78:10,0,296	0/0:6,0:4:12.04:0,12,213	1/1:1,3:4:9.03:128,9,0	0/0:11,0:11:27.05:0,27,469	0/0:4,0:4:12.01:0,12,186	0/0:17,0:14:42.13:0,42,746	0/1:4,3:7:50.87:156,0,51	1/1:1,4:5:15.05:223,15,0	./.	./.	1/1:0,2:2:6.02:92,6,0	1/1:1,2:3:9.03:129,9,0	1/1:2,4:6:18.06:258,18,0	1/1:0,1:1:3.01:46,3,0	1/1:0,4:4:9.03:137,9,0	1/1:0,4:4:12.04:184,12,0	0/0:13,0:13:39.13:0,39,727	0/0:16,0:16:42.14:0,42,743	0/0:12,0:12:30.10:0,30,546	0/1:2,3:5:22.70:116,0,23	1/1:0,2:2:6.02:92,6,0	1/1:2,1:1:3.01:46,3,0	0/0:11,0:11:33.08:0,33,568	1/1:0,6:6:18.06:275,18,0	1/1:2,2:4:12.04:169,12,0	1/1:1,1:2:6.02:85,6,0
chr10	12308055	.	GT	G	1659.41	PASS	AB=0.750;AC=33;AF=0.688;AN=48;BaseQRankSum=4.116;DP=186;FS=4.276;HRun=9;HaplotypeScore=35.9354;InbreedingCoeff=0.5803;MQ=65.81;MQ0=2;MQRankSum=-6.489;QD=15.09;ReadPosRankSum=0.427;VQSLOD=3.0307;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:42.12:0,42,485	./.	0/0:14,0:12:26.54:0,27,231	0/0:10,0:6:12.03:0,12,129	1/1:2,3:5:2.99:27,3,0	0/0:10,0:10:24.03:0,24,259	0/0:2,0:2:3:0,3,25	1/1:3,13:15:39:353,39,0	1/1:1,3:4:2.99:27,3,0	1/1:4,2:6:6:55,6,0	./.	0/0:1,0:1:0:0,0,0	./.	1/1:2,3:5:9:82,9,0	1/1:2,2:4:6:55,6,0	1/1:1,2:3:3:27,3,0	1/1:3,0:3:2.99:23,3,0	1/1:4,0:4:8.98:75,9,0	1/1:2,14:16:45.01:407,45,0	1/1:3,12:15:30.01:274,30,0	1/1:2,6:8:12.01:110,12,0	1/1:1,3:4:9:82,9,0	0/1:2,1:3:21.40:21,0,25	./.	0/0:13,0:13:36.05:0,36,385	1/1:4,0:4:2.97:21,3,0	1/1:2,6:8:17.93:154,18,0	1/1:1,1:2:2.99:27,3,0
chr10	12312075	.	A	ATC	2577.76	PASS	AB=0.600;AC=27;AF=0.540;AN=50;BaseQRankSum=7.792;DP=392;FS=11.672;HRun=0;HaplotypeScore=44.9244;InbreedingCoeff=0.7795;MQ=47.51;MQ0=38;MQRankSum=-7.324;QD=23.43;ReadPosRankSum=1.620;VQSLOD=3.0411;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:35:72.22:0,72,998	1/1:0,8:9:21.07:384,21,0	0/0:20,0:3:9.02:0,9,110	0/0:33,0:10:9.31:0,9,245	1/1:2,12:7:12.04:219,12,0	0/0:16,0:16:33.10:0,33,455	0/0:22,0:20:24.08:0,24,330	0/0:40,0:26:75.23:0,75,1051	1/1:2,3:4:6.02:110,6,0	1/1:2,16:14:36.12:658,36,0	1/1:3,2:3:6.02:110,6,0	./.	1/1:1,5:3:6.02:110,6,0	0/1:1,2:3:0:0,0,0	1/1:1,2:2:3.01:55,3,0	1/1:0,5:2:6.02:110,6,0	./.	0/0:3,0:2:3.01:0,3,43	0/0:19,0:11:33.10:0,33,453	0/0:27,0:25:48.16:0,48,682	0/0:43,0:40:93.03:0,93,1310	1/1:0,17:12:21.07:383,21,0	1/1:2,6:7:15.05:274,15,0	./.	0/0:13,0:13:15.03:0,15,215	1/1:2,3:3:6.01:80,6,0	1/1:1,5:2:3.01:55,3,0	1/1:0,5:4:12.04:219,12,0
chr10	12312512	.	T	TTTTA	1216.87	PASS	AC=16;AF=0.667;AN=24;BaseQRankSum=-3.443;DP=190;FS=0.000;HRun=0;HaplotypeScore=24.6977;InbreedingCoeff=0.5102;MQ=68.69;MQ0=7;MQRankSum=-0.935;QD=16.44;ReadPosRankSum=1.033;VQSLOD=2.8149;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:4:3.01:0,3,46	./.	./.	./.	1/1:5,1:5:3.01:70,3,0	./.	0/0:1,0:1:3:0,3,28	./.	./.	1/1:5,2:6:6.02:141,6,0	1/1:3,1:4:3.01:70,3,0	1/1:3,1:4:3.01:70,3,0	1/1:5,0:4:3.01:60,3,0	./.	./.	./.	1/1:5,5:9:12.04:281,12,0	./.	0/0:12,0:9:12.03:0,12,165	./.	./.	./.	./.	./.	0/0:7,0:7:9.03:0,9,139	./.	1/1:6,2:8:3.01:70,3,0	1/1:16,9:29:24.08:562,24,0
chr10	12314795	.	A	AT	3551.33	PASS	AB=0.992;AC=38;AF=0.679;AN=56;BaseQRankSum=10.631;DP=424;FS=20.508;HRun=8;HaplotypeScore=62.9816;InbreedingCoeff=0.7528;MQ=70.89;MQ0=35;MQRankSum=-3.864;QD=13.82;ReadPosRankSum=-0.755;VQSLOD=1.6249;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:23:60.02:0,60,549	1/1:0,7:7:21.06:239,21,0	0/1:62,0:25:94.64:95,0,100	0/1:60,1:32:90.72:91,0,151	1/1:1,11:12:24.07:266,24,0	0/0:15,0:13:33.02:0,33,302	0/0:10,0:10:15:0,15,137	0/0:24,0:20:60.03:0,60,549	1/1:0,5:5:6.02:69,6,0	1/1:3,9:11:27.08:309,27,0	1/1:0,5:5:12.04:138,12,0	1/1:0,4:4:12.03:136,12,0	1/1:1,5:5:15.04:173,15,0	1/1:0,4:4:12.04:138,12,0	1/1:2,2:3:6.02:67,6,0	1/1:0,5:6:15.04:173,15,0	1/1:1,10:11:27.08:309,27,0	1/1:1,7:8:18.05:208,18,0	0/0:38,0:18:39.01:0,39,357	0/0:20,0:17:50.98:0,51,458	0/0:12,0:11:30.02:0,30,275	1/1:0,2:2:6.02:69,6,0	1/1:2,5:5:15.04:171,15,0	1/1:0,7:7:9.03:104,9,0	0/0:24,0:23:60.02:0,60,548	1/1:1,10:11:24.07:277,24,0	1/1:0,5:5:12.04:138,12,0	1/1:0,16:16:33.10:381,33,0
chr10	12319318	.	AT	A	1004.27	PASS	AB=0.929;AC=31;AF=0.674;AN=46;BaseQRankSum=3.878;DP=254;FS=23.033;HRun=7;HaplotypeScore=15.8753;InbreedingCoeff=0.5941;MQ=25.62;MQ0=41;MQRankSum=-3.878;QD=9.05;ReadPosRankSum=1.175;VQSLOD=-0.2473;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:12,1:10:15.60:16,0,116	./.	./.	./.	1/1:2,7:4:9.02:92,9,0	0/0:24,0:19:24.08:0,24,302	0/0:18,0:11:24.08:0,24,297	0/0:15,0:7:12.03:0,12,138	1/1:1,3:3:3.01:31,3,0	1/1:1,6:5:15.02:146,15,0	1/1:4,7:3:3.01:31,3,0	1/1:1,4:3:6.01:61,6,0	1/1:0,4:4:6.01:61,6,0	1/1:0,6:3:6.01:61,6,0	1/1:0,8:8:21.05:214,21,0	1/1:0,2:1:3.01:31,3,0	./.	1/1:1,7:4:9.02:92,9,0	0/0:20,0:8:24.08:0,24,302	0/0:29,0:16:42.13:0,42,528	0/0:6,0:2:3.01:0,3,38	1/1:0,4:3:9.02:92,9,0	1/1:3,5:1:3.01:31,3,0	1/1:0,2:2:3.01:31,3,0	0/0:12,0:10:15.05:0,15,189	1/1:1,7:6:15.03:152,15,0	1/1:4,8:8:3.01:31,3,0	./.
chr10	12321019	.	T	TC	2051.31	PASS	AC=28;AF=0.583;AN=48;BaseQRankSum=7.779;DP=407;FS=105.106;HRun=0;HaplotypeScore=34.6855;InbreedingCoeff=0.7929;MQ=37.63;MQ0=22;MQRankSum=-6.423;QD=14.25;ReadPosRankSum=2.671;VQSLOD=0.5819;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:30:39.08:0,39,523	1/1:0,6:5:3.01:47,3,0	0/0:4,0:2:3.01:0,3,42	0/0:2,0:2:2.97:0,3,20	./.	0/0:18,0:17:33.11:0,33,461	0/0:16,0:15:36.07:0,36,480	0/0:40,0:25:75.18:0,75,972	1/1:0,19:14:33.11:513,33,0	1/1:2,11:5:6.02:94,6,0	./.	1/1:0,10:7:12:187,12,0	1/1:1,9:6:12.04:186,12,0	1/1:1,5:5:12.04:187,12,0	1/1:0,7:7:12.04:187,12,0	1/1:0,6:3:6.02:93,6,0	1/1:0,15:10:9.03:140,9,0	1/1:1,9:4:6.02:92,6,0	0/0:34,0:30:90.29:0,90,1244	0/0:42,0:39:96.31:0,96,1325	0/0:8,0:8:11.94:0,12,123	./.	1/1:1,8:6:5.88:36,6,0	1/1:1,12:11:11.96:157,12,0	0/0:21,0:18:27.09:0,27,376	1/1:0,7:3:9.03:140,9,0	1/1:1,12:8:12.03:179,12,0	./.
chr10	12321064	.	C	CG	32.04	PASS	AB=0.871;AC=4;AF=0.077;AN=52;BaseQRankSum=3.323;DP=535;FS=5.161;HRun=0;HaplotypeScore=39.7596;InbreedingCoeff=0.1200;MQ=32.28;MQ0=61;MQRankSum=-2.755;QD=0.33;ReadPosRankSum=0.721;VQSLOD=0.5694;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:29:36.11:0,36,498	0/0:11,0:10:12.04:0,12,162	./.	./.	1/1:29,3:10:3.01:47,3,0	0/0:23,0:22:36.12:0,36,502	0/0:13,0:9:12.04:0,12,167	0/0:27,0:18:45.15:0,45,617	0/0:21,0:14:27.09:0,27,359	0/0:24,0:7:12.04:0,12,168	0/1:27,3:10:38.01:38,0,75	0/0:19,0:13:12.04:0,12,149	0/0:10,0:6:3.01:0,3,42	0/0:14,0:8:8.71:0,9,125	0/0:14,0:10:15.05:0,15,209	0/0:11,0:8:6.02:0,6,84	0/0:20,0:13:3.01:0,3,36	0/0:18,0:8:11.68:0,12,167	0/0:35,0:29:84.25:0,84,1153	0/1:28,7:29:46.88:47,0,460	0/0:13,0:10:6.02:0,6,84	0/0:21,1:12:12.04:0,12,156	0/0:18,0:12:9.03:0,9,125	0/0:23,0:20:21.07:0,21,282	0/0:18,0:15:12.04:0,12,167	0/0:13,0:4:12.01:0,12,143	0/0:14,0:8:6.02:0,6,84	0/0:6,0:2:3.01:0,3,41
chr10	12321482	.	TC	T	1397.44	PASS	AB=0.668;AC=15;AF=0.288;AN=52;BaseQRankSum=10.660;DP=887;FS=2.635;HRun=2;HaplotypeScore=63.6687;InbreedingCoeff=-0.4341;MQ=34.06;MQ0=93;MQRankSum=-8.217;QD=2.49;ReadPosRankSum=5.071;VQSLOD=-0.4390;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,14:39:15.31:0,15,725	0/0:9,0:9:9.03:0,9,135	./.	./.	0/1:17,27:22:99:158,0,258	0/1:27,19:31:99:125,0,240	0/1:15,11:13:99:203,0,149	0/0:44,0:17:39.13:0,39,569	0/0:29,0:27:24.08:0,24,359	0/1:27,30:27:99:195,0,726	0/1:20,23:20:47.70:48,0,330	0/0:20,5:15:6:0,6,90	0/1:16,13:17:53.65:54,0,248	0/1:17,11:19:53.68:54,0,245	0/0:18,0:15:6.02:0,6,90	0/0:18,0:16:15.05:0,15,225	0/1:13,17:22:98.57:99,0,117	0/1:9,18:14:29.88:30,0,81	0/0:20,0:10:30.10:0,30,450	0/1:35,26:42:65.25:65,0,1077	0/0:27,10:34:9.26:0,9,634	0/1:19,34:26:99:233,0,229	0/1:25,12:27:99:119,0,324	0/1:13,10:16:32.89:33,0,39	0/0:22,0:22:27.08:0,27,386	0/1:19,17:20:68.74:69,0,511	0/0:18,13:16:12.04:0,12,180	0/1:7,14:11:62.82:63,0,120
chr10	12321567	.	T	TAC	4171.20	PASS	AB=0.900;AC=36;AF=0.667;AN=54;BaseQRankSum=-2.286;DP=396;FS=4.367;HRun=0;HaplotypeScore=53.5762;InbreedingCoeff=0.7698;MQ=60.04;MQ0=3;MQRankSum=-11.630;QD=22.19;ReadPosRankSum=0.844;VQSLOD=3.7350;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:93.26:0,93,1370	1/1:1,3:3:9.03:168,9,0	0/0:17,0:13:34.35:0,34,489	0/0:22,0:20:43.96:0,44,667	1/1:2,3:5:6.01:83,6,0	0/1:28,0:31:1.95:2,0,814	0/1:7,0:8:6.72:7,0,174	0/0:36,0:34:90.18:0,90,1275	1/1:1,10:9:15.05:284,15,0	1/1:2,6:5:11.91:154,12,0	1/1:2,4:6:12.03:170,12,0	1/1:1,10:10:21.04:338,21,0	1/1:2,13:11:27.09:516,27,0	1/1:0,6:5:15.04:257,15,0	1/1:0,11:6:9.03:153,9,0	1/1:1,6:6:8.82:173,9,0	1/1:3,3:5:9.03:146,9,0	1/1:0,2:2:6.02:110,6,0	0/0:26,0:23:69.20:0,69,1011	0/0:20,0:20:57.19:0,57,853	0/0:29,0:28:81.28:0,81,1237	1/1:4,0:5:9.02:99,9,0	1/1:3,5:5:9.03:167,9,0	1/1:0,3:2:6.02:110,6,0	0/0:19,0:19:57.15:0,57,847	1/1:3,15:14:42.14:795,42,0	1/1:2,12:11:24.08:438,24,0	./.
chr10	12321729	.	AT	A	6369.98	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=12.303;DP=568;FS=0.812;HRun=7;HaplotypeScore=63.4795;InbreedingCoeff=0.9533;MQ=52.24;MQ0=7;MQRankSum=-1.632;QD=18.57;ReadPosRankSum=5.317;VQSLOD=4.5424;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,114,1418	1/1:1,5:6:9.02:90,9,0	0/0:16,0:10:26.11:0,26,308	0/0:18,0:18:32.45:0,32,555	1/1:15,17:23:48.05:447,48,0	0/0:25,0:25:60.19:0,60,754	0/0:19,0:19:57.18:0,57,717	0/0:29,0:28:69.18:0,69,838	1/1:2,17:19:29.99:305,30,0	1/1:10,23:27:56.20:625,56,0	1/1:7,16:17:45.09:452,45,0	1/1:0,12:12:30.07:305,30,0	1/1:1,16:17:39.08:395,39,0	1/1:1,9:10:20.95:214,21,0	1/1:0,10:10:21.05:214,21,0	1/1:3,8:10:18.04:183,18,0	1/1:1,29:30:69.15:702,69,0	1/1:1,9:9:21.05:214,21,0	0/0:27,0:19:51.16:0,51,641	0/0:20,1:15:2.64:0,3,347	0/0:13,0:12:33.11:0,33,414	1/1:19,17:24:44.77:438,45,0	1/1:7,23:26:57.12:580,57,0	1/1:1,20:21:54.12:550,54,0	0/0:14,0:14:36.12:0,36,452	1/1:7,12:16:38.92:381,39,0	1/1:2,11:11:15.03:153,15,0	1/1:6,5:5:12.03:122,12,0
chr10	12322273	.	GGGCACGAA	G	11885.65	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=12.099;DP=474;FS=16.501;HRun=0;HaplotypeScore=140.9130;InbreedingCoeff=0.9534;MQ=71.05;MQ0=4;MQRankSum=-14.270;QD=50.36;ReadPosRankSum=2.564;VQSLOD=3.8788;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:96.29:0,96,3787	1/1:0,4:3:6.02:166,6,0	0/0:28,0:23:27.58:0,28,1914	0/0:35,1:26:53.98:0,54,2313	1/1:1,14:14:21.07:562,21,0	0/0:16,0:16:48.16:0,48,1985	0/0:24,0:24:69.24:0,69,2850	0/0:11,0:11:18.06:0,18,605	1/1:3,22:25:51.18:1413,51,0	1/1:5,11:14:36.10:929,36,0	1/1:1,6:6:9.03:221,9,0	1/1:2,13:15:36.12:956,36,0	1/1:1,8:9:17.87:498,18,0	1/1:0,16:16:42.14:1128,42,0	1/1:3,17:20:39.13:1038,39,0	1/1:0,4:4:12.04:305,12,0	1/1:3,13:16:24.08:665,24,0	1/1:8,12:20:30.10:796,30,0	0/0:15,0:12:33.11:0,33,1299	0/0:10,0:10:27.09:0,27,1095	0/0:51,0:51:99:0,135,5825	1/1:0,7:7:15.05:408,15,0	1/1:0,7:7:12.04:322,12,0	1/1:3,13:16:12.04:304,12,0	0/0:14,0:14:30.10:0,30,1250	1/1:4,17:19:45.15:1191,45,0	1/1:3,8:11:21.07:575,21,0	1/1:1,6:7:15.05:409,15,0
chr10	12322670	.	ACTGGT	A	3510.72	PASS	AB=0.806;AC=18;AF=0.321;AN=56;BaseQRankSum=3.883;DP=559;FS=0.516;HRun=0;HaplotypeScore=162.6591;InbreedingCoeff=-0.3565;MQ=42.64;MQ0=15;MQRankSum=-7.537;QD=12.45;ReadPosRankSum=-6.110;VQSLOD=0.9994;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:56:99:0,114,3553	0/1:10,0:10:88.03:88,0,126	0/0:9,0:3:9.03:0,9,261	0/0:26,0:5:13.18:0,13,299	0/1:8,3:10:56.58:118,0,57	0/0:17,0:17:24.08:0,24,761	0/0:30,0:26:60.21:0,60,1844	0/0:22,0:20:57.16:0,57,1681	0/1:15,3:18:99:143,0,225	0/1:16,3:16:88.30:88,0,323	1/1:11,3:11:3.01:65,3,0	0/1:15,3:17:99:156,0,122	0/1:14,10:23:99:610,0,273	0/1:18,3:20:16.94:17,0,503	0/1:15,5:20:99:339,0,147	0/0:16,1:17:30.09:0,30,359	0/1:12,4:14:97.48:248,0,97	0/1:6,5:11:40.01:118,0,40	0/0:35,0:26:78.27:0,78,2392	0/0:21,0:21:57.20:0,57,1758	0/0:28,0:26:60.20:0,60,1882	0/1:11,7:16:50.86:385,0,51	0/1:8,5:11:40.22:241,0,40	0/1:9,6:14:99:230,0,130	0/0:16,0:16:36.12:0,36,1142	0/1:13,4:13:99:257,0,137	0/1:18,7:24:99:364,0,331	0/1:11,1:12:41.03:41,0,227
chr10	12322672	.	TG	T	856.71	PASS	AB=1.000;AC=35;AF=0.625;AN=56;BaseQRankSum=15.501;DP=557;FS=5.160;HRun=2;HaplotypeScore=149.7283;InbreedingCoeff=0.8524;MQ=44.13;MQ0=15;MQRankSum=-12.258;QD=2.92;ReadPosRankSum=2.313;VQSLOD=0.2991;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:56:99:0,117,1723	1/1:8,1:9:10.99:38,11,0	0/0:12,0:3:9.02:0,9,116	0/0:27,0:6:9.05:0,9,138	1/1:11,0:10:9.35:36,9,0	0/0:17,0:17:27.09:0,27,403	0/0:30,0:26:60.16:0,60,874	0/0:23,0:21:57.19:0,57,845	1/1:17,0:17:15.08:58,15,0	1/1:18,0:16:21.28:86,21,0	1/1:14,0:11:2.19:7,2,0	0/1:19,0:18:10.78:21,0,11	1/1:23,0:22:41.01:121,41,0	1/1:21,0:20:30.28:82,30,0	1/1:19,1:20:25.60:81,26,0	1/1:15,1:16:20.44:59,20,0	1/1:15,0:13:17.02:66,17,0	1/1:11,0:11:12.73:38,13,0	0/0:35,0:27:81.27:0,81,1210	0/0:21,0:21:57.19:0,57,850	0/0:27,0:25:63.13:0,63,919	1/1:17,0:16:21.20:88,21,0	1/1:12,1:11:11.51:42,12,0	1/1:13,2:14:13.19:43,13,0	0/0:16,0:16:39.13:0,39,583	1/1:17,0:13:12.84:41,13,0	1/1:24,0:23:37.63:116,38,0	1/1:12,0:12:16.85:49,17,0
chr10	12322673	.	G	GTTTTTACT	14229.63	PASS	AB=0.692;AC=35;AF=0.625;AN=56;BaseQRankSum=14.871;DP=480;FS=6.697;HRun=0;HaplotypeScore=131.1243;InbreedingCoeff=0.8771;MQ=46.26;MQ0=14;MQRankSum=-12.447;QD=66.49;ReadPosRankSum=1.820;VQSLOD=4.5036;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:57:99:0,117,3264	1/1:1,4:6:18.02:640,18,0	0/0:12,0:3:9.03:0,9,242	0/0:28,0:6:7.75:0,8,287	1/1:6,2:7:11.66:190,12,0	0/0:17,0:17:27.09:0,27,741	0/0:30,0:26:59.90:0,60,1682	0/0:23,0:21:57.15:0,57,1436	1/1:6,6:12:29.77:870,30,0	1/1:5,6:10:26.94:754,27,0	1/1:4,2:4:2.84:14,3,0	0/1:5,4:8:6.26:517,0,6	1/1:10,12:21:53.48:1496,53,0	1/1:3,14:17:48:1903,48,0	1/1:6,9:15:35.57:1180,36,0	1/1:2,10:12:30.10:1271,30,0	1/1:6,6:10:23.68:492,24,0	1/1:5,4:9:17.71:538,18,0	0/0:35,0:27:81.28:0,81,2183	0/0:21,0:21:57.19:0,57,1477	0/0:27,0:25:62.76:0,63,1718	1/1:9,4:12:26.20:489,26,0	1/1:6,3:8:18.30:293,18,0	1/1:9,6:14:26.46:767,26,0	0/0:16,0:16:39.13:0,39,1077	1/1:6,4:7:10.03:299,10,0	1/1:8,11:18:53.26:1612,53,0	1/1:1,7:8:23.95:907,24,0
chr10	12322675	.	T	TCTA	6622.46	PASS	AB=0.846;AC=36;AF=0.643;AN=56;BaseQRankSum=14.931;DP=485;FS=3.077;HRun=0;HaplotypeScore=127.7803;InbreedingCoeff=0.7194;MQ=46.22;MQ0=14;MQRankSum=-12.594;QD=26.81;ReadPosRankSum=2.712;VQSLOD=5.2778;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:59,0:59:99:0,120,1957	1/1:1,5:7:18.06:312,18,0	0/0:13,0:4:9.03:0,9,153	0/1:29,0:7:15.60:16,0,143	1/1:5,2:6:6.51:67,7,0	0/0:16,0:16:27.09:0,27,460	0/0:29,0:25:57.19:0,57,972	0/0:23,0:21:54.18:0,54,904	1/1:5,6:11:1.97:321,2,0	1/1:6,6:11:6.45:303,6,0	1/1:5,2:5:2.37:8,2,0	0/1:5,4:8:31.24:256,0,31	1/1:10,12:21:41.66:680,42,0	1/1:3,15:17:46.40:855,46,0	1/1:7,10:16:35.58:563,36,0	1/1:1,11:12:30.10:576,30,0	1/1:6,6:10:6.33:259,6,0	1/1:6,4:10:18.91:305,19,0	0/0:35,0:27:75.22:0,75,1249	0/0:20,0:20:54.10:0,54,857	0/0:27,0:26:63.17:0,63,1042	1/1:9,4:12:18.88:240,19,0	1/1:7,4:10:16.24:190,16,0	1/1:7,8:14:25.69:342,26,0	0/0:16,0:16:39.13:0,39,665	1/1:4,4:6:3.85:194,4,0	1/1:7,11:18:35.07:727,35,0	1/1:1,7:8:22.63:408,23,0
chr10	12323604	.	A	ATAT	1757.43	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=8.719;DP=542;FS=3.215;HRun=0;HaplotypeScore=110.1248;InbreedingCoeff=0.9849;MQ=57.99;MQ0=3;MQRankSum=-8.561;QD=47.50;ReadPosRankSum=-1.555;VQSLOD=5.2585;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:68.82:0,69,1126	0/0:13,0:13:39.13:0,39,698	0/0:20,0:12:29.93:0,30,486	0/0:12,0:8:24.07:0,24,415	0/0:39,0:39:99:0,117,2142	0/0:29,0:29:87.28:0,87,1554	0/0:14,0:14:39.12:0,39,682	1/1:0,5:5:15.05:313,15,0	0/0:21,0:21:60.20:0,60,1084	0/0:32,0:32:96.32:0,96,1701	0/0:18,0:18:54.19:0,54,1007	0/0:16,0:16:48.16:0,48,888	0/0:23,0:23:69.23:0,69,1257	0/0:15,0:15:45.15:0,45,801	0/0:22,0:22:63.22:0,63,1167	0/0:18,0:18:51.16:0,51,913	0/0:22,0:22:63.15:0,63,1129	0/0:24,0:24:72.25:0,72,1316	1/1:2,2:4:12.04:237,12,0	1/1:0,19:21:54.18:971,54,0	1/1:0,7:7:21.07:392,21,0	0/0:24,0:24:69.24:0,69,1283	0/0:19,0:19:57.18:0,57,1022	0/0:18,0:18:54.17:0,54,960	0/0:20,0:20:60.21:0,60,1108	0/0:18,0:18:54.17:0,54,975	0/0:31,0:31:93.28:0,93,1632	0/0:11,0:11:33.11:0,33,615
chr10	12323610	.	ATCC	A	1129.78	PASS	AB=0.714;AC=7;AF=0.125;AN=56;BaseQRankSum=9.196;DP=557;FS=0.000;HRun=0;HaplotypeScore=113.2532;InbreedingCoeff=0.8269;MQ=57.92;MQ0=3;MQRankSum=-7.562;QD=28.24;ReadPosRankSum=-2.199;VQSLOD=3.2511;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:72.18:0,72,1674	0/0:12,0:12:36.12:0,36,860	0/0:20,0:12:19.90:0,20,759	0/0:15,0:11:15.04:0,15,481	0/0:42,0:42:99:0,126,3063	0/0:27,0:27:81.28:0,81,1971	0/0:15,0:15:45.15:0,45,1086	1/1:0,7:7:21.07:313,21,0	0/0:20,0:20:60.19:0,60,1426	0/0:34,0:34:99:0,102,2479	0/0:20,0:20:60.21:0,60,1429	0/0:16,0:16:48.16:0,48,1126	0/0:22,0:22:66.23:0,66,1603	0/0:14,0:14:42.14:0,42,1035	0/0:22,0:22:63.22:0,63,1530	0/0:17,0:17:51.16:0,51,1185	0/0:23,0:23:69.13:0,69,1516	0/0:27,0:27:78.20:0,78,1807	0/1:3,2:5:42.13:181,0,42	1/1:3,18:21:54.08:617,54,0	1/1:0,7:7:18.40:166,18,0	0/0:25,0:25:75.26:0,75,1771	0/0:21,0:21:63.22:0,63,1516	0/0:16,0:16:48.14:0,48,1132	0/0:20,0:20:60.20:0,60,1431	0/0:19,0:19:54.17:0,54,1259	0/0:30,0:30:90.29:0,90,2137	0/0:13,0:13:39.13:0,39,954
chr10	12324959	.	T	TGAGA	24857.19	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=12.199;DP=603;FS=10.359;HRun=0;HaplotypeScore=108.1186;InbreedingCoeff=0.9927;MQ=68.73;MQ0=0;MQRankSum=-8.234;QD=66.82;ReadPosRankSum=4.457;VQSLOD=6.5982;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:78.27:0,78,1472	1/1:2,9:11:27.09:728,27,0	0/0:23,0:24:63.14:0,63,1098	0/0:18,0:18:45.12:0,45,779	1/1:3,26:29:60.21:1617,60,0	0/0:26,0:26:75.25:0,75,1373	0/0:14,0:14:36.12:0,36,683	0/0:31,0:31:90.29:0,90,1645	1/1:4,26:31:72.25:1900,72,0	1/1:8,37:45:99:3403,132,0	1/1:5,16:22:48.16:1292,48,0	1/1:1,13:14:42.14:1107,42,0	1/1:1,18:20:51.18:1374,51,0	1/1:4,13:17:48.16:1259,48,0	1/1:3,17:20:54.19:1455,54,0	1/1:1,5:7:15.05:405,15,0	1/1:0,22:22:60.21:1617,60,0	1/1:5,4:10:15.05:405,15,0	0/0:14,0:14:36.12:0,36,684	0/0:30,0:30:87.28:0,87,1620	0/0:18,0:18:54.19:0,54,1024	1/1:1,23:27:69.24:1850,69,0	1/1:3,20:24:56.94:1536,57,0	1/1:2,7:9:18.06:486,18,0	0/0:29,0:29:81.28:0,81,1538	1/1:2,25:27:81.26:2088,81,0	1/1:7,23:30:69.24:1850,69,0	1/1:0,6:6:18.06:486,18,0
chr10	12328490	.	T	TG	13468.28	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-1.010;DP=563;FS=7.775;HRun=1;HaplotypeScore=81.2867;InbreedingCoeff=0.9925;MQ=60.95;MQ0=1;MQRankSum=-4.523;QD=38.15;ReadPosRankSum=4.161;VQSLOD=5.3084;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:39.92:0,40,825	1/1:3,6:9:24.08:359,24,0	0/0:21,0:21:54.16:0,54,675	0/0:12,0:10:12.25:0,12,274	1/1:6,28:34:72.20:1014,72,0	0/0:16,0:15:48.15:0,48,611	0/0:14,0:14:36.12:0,36,467	0/0:33,0:33:93.28:0,93,1182	1/1:0,21:21:63.21:943,63,0	1/1:3,22:24:66.19:947,66,0	1/1:3,23:26:60.20:897,60,0	1/1:1,15:16:48.15:698,48,0	1/1:4,15:19:51.14:724,51,0	1/1:5,16:20:54.16:770,54,0	1/1:5,18:23:57.06:778,57,0	1/1:1,18:19:54.17:788,54,0	1/1:1,18:19:45.15:673,45,0	1/1:1,8:9:15.05:224,15,0	0/0:19,0:19:54.16:0,54,686	0/0:31,0:31:93.30:0,93,1207	0/0:16,0:16:42.13:0,42,533	1/1:1,22:23:69.23:1029,69,0	1/1:3,20:23:60.19:877,60,0	1/1:1,9:10:27.09:404,27,0	0/0:19,0:19:57.18:0,57,729	1/1:1,21:21:63.21:943,63,0	1/1:4,22:26:72.22:1039,72,0	1/1:0,8:8:24.08:359,24,0
chr10	12328532	.	G	GAA	5254.83	PASS	AB=0.857;AC=39;AF=0.696;AN=56;BaseQRankSum=11.312;DP=503;FS=6.151;HRun=7;HaplotypeScore=100.1630;InbreedingCoeff=0.9085;MQ=39.83;MQ0=9;MQRankSum=-11.620;QD=15.55;ReadPosRankSum=-0.669;VQSLOD=2.1621;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:51.37:0,51,686	1/1:9,0:9:14.98:125,15,0	0/0:16,0:4:6.01:0,6,70	0/0:15,0:3:9.03:0,9,105	1/1:35,0:35:16.22:354,16,0	1/1:1,14:13:42.14:689,42,0	1/1:4,7:11:18.04:259,18,0	0/0:29,0:29:75.16:0,75,834	1/1:19,0:20:47.77:386,48,0	1/1:27,0:25:68.89:572,69,0	1/1:22,0:22:20.98:176,21,0	1/1:19,0:19:29.86:235,30,0	1/1:11,0:11:14.98:124,15,0	1/1:16,0:16:38.90:317,39,0	1/1:15,0:15:20.98:175,21,0	1/1:16,0:16:23.97:201,24,0	1/1:14,0:14:23.93:193,24,0	1/1:6,0:6:5.99:50,6,0	0/0:18,0:14:39.05:0,39,437	0/0:31,0:31:81.21:0,81,933	0/0:13,0:13:36.11:0,36,419	1/1:20,0:20:26.97:227,27,0	1/1:18,0:20:32.88:261,33,0	0/1:5,0:6:0:0,0,0	0/0:17,0:17:43.17:0,43,457	1/1:20,0:19:44.91:370,45,0	1/1:31,0:31:56.74:466,57,0	1/1:4,0:4:8.99:75,9,0
chr10	12328538	.	A	AAAC	11756.16	PASS	AB=0.916;AC=39;AF=0.696;AN=56;BaseQRankSum=4.353;DP=519;FS=9.121;HRun=0;HaplotypeScore=83.6921;InbreedingCoeff=0.7183;MQ=40.82;MQ0=10;MQRankSum=-11.590;QD=31.10;ReadPosRankSum=0.424;VQSLOD=4.5144;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:27:33.65:34,0,974	1/1:0,8:8:15.05:337,15,0	0/0:17,0:4:6.02:0,6,98	0/0:15,0:3:9.03:0,9,146	1/1:3,32:36:11.17:936,11,0	0/1:16,0:15:10.21:71,0,10	1/1:10,0:10:10.36:47,10,0	0/0:29,0:29:78.23:0,78,1214	1/1:3,19:22:48.16:1060,48,0	1/1:3,25:28:78.23:1642,78,0	1/1:2,20:22:21.07:471,21,0	1/1:2,17:20:30.01:530,30,0	1/1:0,10:10:15.05:336,15,0	1/1:2,15:17:39.04:739,39,0	1/1:0,18:18:24.08:524,24,0	1/1:3,11:15:30.03:581,30,0	1/1:7,8:16:32.63:575,33,0	1/1:1,7:8:6.02:135,6,0	0/0:19,0:16:45.11:0,45,665	0/0:32,0:32:96.28:0,96,1444	0/0:13,0:13:39.12:0,39,612	1/1:2,15:18:27.09:606,27,0	1/1:4,15:19:32.97:557,33,0	0/1:7,2:9:0.53:141,0,1	0/0:16,0:16:47.94:0,48,688	1/1:2,18:19:45.15:1009,45,0	1/1:3,28:32:57.18:1224,57,0	1/1:0,3:4:9.03:203,9,0
chr10	12330793	.	TAC	T	503.02	PASS	AB=1.000;AC=28;AF=0.824;AN=34;BaseQRankSum=2.022;DP=177;FS=1.218;HRun=0;HaplotypeScore=28.4675;InbreedingCoeff=0.1396;MQ=34.52;MQ0=21;MQRankSum=0.871;QD=3.93;ReadPosRankSum=1.830;VQSLOD=1.5505;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:21:23.47:23,0,223	./.	./.	./.	1/1:4,0:3:3.01:41,3,0	./.	./.	0/1:20,0:14:2.25:2,0,114	./.	1/1:8,0:7:8.86:85,9,0	1/1:4,1:5:3.01:42,3,0	./.	1/1:3,1:4:2.37:8,2,0	1/1:5,0:4:2.99:35,3,0	1/1:5,0:5:3.01:34,3,0	1/1:2,2:3:3.01:42,3,0	1/1:8,2:9:11.94:109,12,0	1/1:8,0:7:5.96:54,6,0	0/1:12,0:8:1.18:1,0,75	./.	./.	./.	./.	1/1:2,0:2:3:25,3,0	0/0:7,0:7:14.52:0,15,170	0/1:6,0:4:12.99:13,0,48	1/1:3,0:3:0.47:1,0,0	1/1:8,0:7:9.49:97,9,0
chr10	12330795	.	C	CAT	444.93	PASS	AB=1.000;AC=10;AF=0.313;AN=32;BaseQRankSum=-0.580;DP=149;FS=5.513;HRun=0;HaplotypeScore=32.1789;InbreedingCoeff=0.3128;MQ=35.72;MQ0=21;MQRankSum=-3.904;QD=8.56;ReadPosRankSum=-1.539;VQSLOD=1.6565;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:22:23.70:0,24,248	./.	./.	./.	0/0:1,0:1:2.74:0,3,12	./.	./.	1/1:13,8:17:28.75:342,29,0	./.	0/0:4,0:3:5.59:0,6,25	0/0:4,0:4:2.74:0,3,12	./.	1/1:3,0:3:0.47:1,0,0	0/0:2,0:2:2.54:0,3,12	0/0:4,0:4:2.80:0,3,13	0/0:4,0:3:5.67:0,6,29	0/1:8,0:8:10.39:10,0,16	0/0:5,0:4:2.87:0,3,15	1/1:8,2:7:14.87:167,15,0	./.	./.	./.	./.	./.	0/0:8,0:8:12.03:0,12,132	0/0:4,0:2:3.01:0,3,36	1/1:1,0:1:3:25,3,0	0/1:8,0:7:12.56:13,0,33
chr10	12330811	.	C	CATATAT	513.29	PASS	AB=1.000;AC=10;AF=0.278;AN=36;BaseQRankSum=-2.224;DP=142;FS=17.034;HRun=0;HaplotypeScore=41.6585;InbreedingCoeff=0.2896;MQ=53.83;MQ0=12;MQRankSum=-2.446;QD=12.22;ReadPosRankSum=-3.253;VQSLOD=-0.2823;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:20:35.22:0,35,587	./.	0/0:8,0:2:2.97:0,3,20	0/0:17,0:3:2.04:0,2,6	0/0:1,0:1:3.01:0,3,38	./.	./.	1/1:17,0:14:21.64:202,22,0	1/1:1,0:1:2.99:24,3,0	0/1:4,0:4:12.05:12,0,63	0/0:4,0:4:2.95:0,3,37	./.	0/0:3,0:3:2.90:0,3,16	0/0:2,0:2:2.68:0,3,38	0/0:2,0:2:3.01:0,3,38	0/0:3,0:3:6.02:0,6,78	0/1:9,0:9:12.07:12,0,68	0/0:5,0:5:1.88:0,2,38	1/1:5,4:7:17.27:367,17,0	./.	./.	./.	./.	./.	0/0:7,0:7:18.04:0,18,318	./.	1/1:2,0:2:0.17:16,0,0	0/0:8,0:7:10.21:0,10,127
chr10	12331200	.	GGGGA	G	11330.32	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=13.511;DP=519;FS=5.506;HRun=0;HaplotypeScore=97.3423;InbreedingCoeff=0.9832;MQ=69.98;MQ0=1;MQRankSum=-6.170;QD=41.35;ReadPosRankSum=5.339;VQSLOD=5.0780;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,138,3536	1/1:0,3:3:9.03:168,9,0	0/0:16,0:16:39.13:0,39,948	0/0:18,0:17:48.16:0,48,1221	1/1:0,12:12:24.08:448,24,0	0/0:23,0:22:66.23:0,66,1687	0/0:25,0:25:72.25:0,72,1920	0/0:21,0:21:51.17:0,51,1277	1/1:1,16:17:39.13:728,39,0	1/1:1,17:18:51.17:952,51,0	1/1:2,15:17:36.12:672,36,0	1/1:1,13:14:27.05:464,27,0	1/1:3,16:19:42.14:781,42,0	1/1:1,13:14:33.11:616,33,0	1/1:0,5:5:12.04:224,12,0	1/1:1,16:17:48.16:896,48,0	1/1:1,19:20:45.15:840,45,0	1/1:3,20:22:17.07:809,17,0	0/0:12,0:11:33.11:0,33,849	0/0:9,0:9:21.07:0,21,560	0/0:51,0:50:99:0,138,3653	1/1:1,14:15:27.09:492,27,0	1/1:0,13:12:21.05:392,21,0	1/1:1,15:16:35.79:667,36,0	0/0:21,0:21:63.22:0,63,1670	1/1:1,14:15:39.13:728,39,0	1/1:2,22:24:51.17:951,51,0	1/1:0,12:12:27.09:504,27,0
chr10	12331380	.	A	AAG	14108.49	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=12.245;DP=408;FS=17.442;HRun=0;HaplotypeScore=90.1490;InbreedingCoeff=0.9074;MQ=59.23;MQ0=0;MQRankSum=-7.345;QD=53.44;ReadPosRankSum=2.067;VQSLOD=3.9902;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:45.03:0,45,756	1/1:0,5:5:15.05:304,15,0	0/0:6,0:6:1.31:0,1,190	0/0:7,0:5:9.29:0,9,110	1/1:2,25:27:78.25:1471,78,0	1/1:0,18:20:51.18:1035,51,0	1/1:0,8:8:15.05:305,15,0	0/0:26,0:26:75.24:0,75,1138	1/1:0,11:11:33.11:668,33,0	1/1:2,20:22:66.20:1282,66,0	1/1:6,23:30:75.15:1398,75,0	1/1:1,3:4:9.03:182,9,0	1/1:0,15:15:42.14:850,42,0	1/1:0,10:10:30.10:584,30,0	1/1:0,7:7:21.07:424,21,0	1/1:2,12:14:42.12:779,42,0	1/1:0,5:5:15.05:304,15,0	1/1:0,10:10:30.10:608,30,0	0/0:17,0:17:51.15:0,51,755	0/0:20,0:20:57.16:0,57,842	0/0:9,0:9:27.08:0,27,408	1/1:0,2:2:6.02:121,6,0	1/1:1,20:22:63.16:1173,63,0	1/1:3,2:5:9:110,9,0	0/0:42,0:42:99:0,120,1847	1/1:1,15:17:51.13:973,51,0	1/1:4,17:20:57.12:1040,57,0	1/1:1,8:9:27.02:498,27,0
chr10	12331412	.	T	TTC	12018.12	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=15.767;DP=441;FS=21.373;HRun=0;HaplotypeScore=105.9442;InbreedingCoeff=0.9581;MQ=58.45;MQ0=0;MQRankSum=-6.572;QD=47.69;ReadPosRankSum=2.640;VQSLOD=3.9192;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:48.11:0,48,690	1/1:0,2:3:6.02:109,6,0	0/0:8,0:7:15.03:0,15,192	0/0:5,0:4:10.85:0,11,133	1/1:3,29:32:93.22:1526,93,0	0/0:17,0:16:40:0,40,576	0/0:7,0:7:15.04:0,15,210	0/0:27,0:27:81.27:0,81,1218	1/1:3,9:12:33.03:505,33,0	1/1:0,20:20:60.21:1087,60,0	1/1:5,31:36:99:1651,102,0	1/1:1,9:10:24.08:439,24,0	1/1:1,10:11:27.08:462,27,0	1/1:1,8:10:27.08:461,27,0	1/1:0,9:9:27.09:493,27,0	1/1:0,15:15:45.15:822,45,0	1/1:0,3:3:9.03:164,9,0	1/1:1,6:7:21.02:348,21,0	0/0:27,0:27:75.24:0,75,1123	0/0:29,0:29:84.26:0,84,1245	0/0:12,0:12:33.09:0,33,482	1/1:2,6:9:18.05:329,18,0	1/1:2,19:21:54.18:972,54,0	1/1:0,5:5:12.04:220,12,0	0/0:41,0:41:99:0,123,1810	1/1:2,17:19:54.18:959,54,0	1/1:1,18:19:54.18:985,54,0	1/1:1,9:10:30.03:489,30,0
chr10	12332062	.	TA	T	229.76	PASS	AB=0.730;AC=11;AF=0.229;AN=48;BaseQRankSum=6.520;DP=385;FS=6.897;HRun=1;HaplotypeScore=91.6696;InbreedingCoeff=0.1674;MQ=52.78;MQ0=18;MQRankSum=-4.554;QD=2.80;ReadPosRankSum=0.576;VQSLOD=-0.5129;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:13:20.66:0,21,262	1/1:3,2:5:5.75:51,6,0	0/0:38,0:13:29.37:0,29,373	0/0:43,0:15:25.46:0,25,337	./.	0/0:10,0:10:15.05:0,15,204	0/0:12,0:13:27.09:0,27,363	0/0:20,0:16:40.05:0,40,492	0/0:5,4:9:1.55:0,2,4	0/1:8,2:10:2.79:3,0,253	0/0:8,3:11:0:0,0,0	1/1:3,3:5:5.98:59,6,0	0/1:8,3:8:28.02:77,0,28	0/0:4,3:7:0:0,0,0	./.	0/1:8,5:12:6.04:33,0,6	0/0:4,0:4:3.01:0,3,40	0/1:3,3:6:18:18,0,79	0/0:11,0:11:28.34:0,28,371	0/0:16,0:20:25.70:0,26,302	0/0:23,0:26:36.12:0,36,487	0/0:9,4:12:0.47:0,0,1	./.	./.	0/0:13,0:13:33.08:0,33,444	0/1:6,5:12:87.75:88,0,131	0/1:7,3:9:4.57:5,0,170	0/1:3,1:4:25.55:26,0,69
chr10	12332070	.	C	CT	99.01	PASS	AB=0.990;AC=14;AF=0.292;AN=48;BaseQRankSum=6.258;DP=356;FS=3.564;HRun=0;HaplotypeScore=89.7337;InbreedingCoeff=0.0668;MQ=46.17;MQ0=18;MQRankSum=-2.949;QD=0.79;ReadPosRankSum=-1.837;VQSLOD=1.2823;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:13:20.71:0,21,246	0/1:6,0:5:3.98:11,0,4	0/0:27,0:8:16.79:0,17,178	0/1:30,0:8:20.97:21,0,126	1/1:16,0:14:1.72:4,2,0	0/0:14,0:12:15.05:0,15,207	0/0:13,0:13:26.12:0,26,337	0/0:17,0:13:33.56:0,34,427	0/0:10,0:9:2.31:0,2,13	0/1:10,1:10:3.27:3,0,273	0/0:13,0:12:0:0,0,0	1/1:7,0:4:2.22:7,2,0	0/1:11,0:8:40.36:46,0,40	./.	./.	1/1:11,2:12:2.63:16,3,0	0/0:6,0:6:5.89:0,6,56	0/1:5,0:5:12.18:12,0,105	0/0:6,0:6:9.65:0,10,149	0/0:21,0:20:18.68:0,19,289	0/0:25,0:25:33.10:0,33,441	0/0:12,0:11:0:0,0,1	./.	./.	0/0:14,0:14:36.10:0,36,481	0/1:12,0:12:79.33:79,0,157	0/1:10,0:9:6.96:7,0,188	0/1:4,0:3:18.71:19,0,43
chr10	12332072	.	C	CT	191.99	PASS	AB=0.940;AC=12;AF=0.250;AN=48;BaseQRankSum=5.783;DP=353;FS=2.137;HRun=0;HaplotypeScore=88.7673;InbreedingCoeff=0.1720;MQ=44.89;MQ0=20;MQRankSum=-2.842;QD=2.23;ReadPosRankSum=-2.180;VQSLOD=2.4609;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:14:20.72:0,21,263	0/1:5,1:5:0.28:15,0,0	0/0:19,0:3:8.60:0,9,77	0/0:26,0:7:11.25:0,11,122	1/1:16,0:14:3.47:26,3,0	0/0:16,0:14:18.04:0,18,232	0/0:15,0:15:28.89:0,29,362	0/0:18,0:14:39.58:0,40,500	0/0:7,2:8:1.56:0,2,5	0/0:10,1:10:4.73:0,5,281	0/0:11,2:12:0:0,0,0	1/1:7,0:4:2.88:15,3,0	0/1:11,0:8:38.38:62,0,38	./.	./.	1/1:11,2:12:2.64:18,3,0	0/0:6,0:6:5.93:0,6,58	0/1:5,0:5:14.74:15,0,111	0/0:5,0:6:2.40:0,2,141	0/0:21,0:20:18.68:0,19,289	0/0:27,0:25:33.09:0,33,424	0/0:12,0:11:0:0,0,1	./.	./.	0/0:13,0:13:33.09:0,33,436	0/1:11,1:13:99:119,0,154	0/1:10,0:10:27.09:27,0,186	0/1:4,0:3:25.75:26,0,41
chr10	12332074	.	C	CT	422.84	PASS	AB=0.915;AC=14;AF=0.292;AN=48;BaseQRankSum=6.686;DP=362;FS=0.814;HRun=0;HaplotypeScore=95.8139;InbreedingCoeff=0.1321;MQ=44.75;MQ0=20;MQRankSum=-4.490;QD=3.99;ReadPosRankSum=-2.724;VQSLOD=2.9876;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:13:23.71:0,24,287	1/1:6,0:5:7.22:33,7,0	0/0:18,0:2:3.48:0,3,43	0/0:24,0:7:11.02:0,11,106	1/1:15,1:14:3.48:46,3,0	0/0:17,0:15:21.07:0,21,287	0/0:15,0:15:32.11:0,32,387	0/0:17,0:13:36.59:0,37,481	0/0:8,2:9:2.79:0,3,13	0/1:12,0:11:21.50:21,0,292	0/0:13,1:13:0:0,0,0	1/1:6,2:5:2.94:18,3,0	0/1:12,2:11:24.53:148,0,25	./.	./.	1/1:13,0:12:1.42:5,1,0	0/0:6,0:6:5.98:0,6,58	0/1:6,0:7:49.29:49,0,109	0/0:6,0:6:0.69:0,1,139	0/0:21,0:20:18.68:0,19,289	0/0:26,0:24:30.09:0,30,399	0/0:11,1:11:0:0,0,1	./.	./.	0/0:12,0:12:30.04:0,30,377	0/1:10,3:13:99:123,0,183	0/1:12,0:12:79.31:79,0,183	0/1:3,1:3:33.22:35,0,33
chr10	12333728	.	C	CA	17382.64	PASS	AB=1.000;AC=45;AF=0.804;AN=56;BaseQRankSum=-14.179;DP=780;FS=19.487;HRun=8;HaplotypeScore=71.2365;InbreedingCoeff=0.9256;MQ=69.93;MQ0=0;MQRankSum=-2.755;QD=28.54;ReadPosRankSum=0.213;VQSLOD=3.2985;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:60,0:60:99:0,162,1483	1/1:1,13:14:33.10:381,33,0	0/1:12,0:12:2.82:3,0,143	0/0:19,0:19:30:0,30,270	1/1:4,23:27:69.04:774,69,0	0/0:30,0:30:71.67:0,72,705	0/0:36,0:36:96.05:0,96,878	1/1:3,27:30:78.22:889,78,0	1/1:4,28:32:78.23:892,78,0	1/1:3,30:33:81.21:913,81,0	1/1:1,33:34:90.19:1010,90,0	1/1:1,19:20:57.17:658,57,0	1/1:2,22:24:57.17:656,57,0	1/1:1,18:19:48.14:554,48,0	1/1:4,29:33:56.78:907,57,0	1/1:7,21:28:63.19:727,63,0	1/1:2,17:18:51.15:589,51,0	1/1:2,19:21:57.17:658,57,0	1/1:1,21:22:63.17:717,63,0	1/1:2,36:39:90.02:989,90,0	1/1:4,33:37:96.29:1108,96,0	1/1:4,37:41:99:1276,114,0	1/1:4,23:27:66.20:761,66,0	1/1:4,30:34:93.26:1062,93,0	0/0:26,0:26:53.99:0,54,486	1/1:4,33:37:99:1132,99,0	1/1:2,18:20:45.13:519,45,0	1/1:0,6:6:18.05:208,18,0
chr10	12335424	.	C	CCGTCTTT	4324.28	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-1.853;DP=632;FS=13.059;HRun=0;HaplotypeScore=203.1947;InbreedingCoeff=0.9968;MQ=80.76;MQ0=0;MQRankSum=-10.315;QD=88.25;ReadPosRankSum=-1.088;VQSLOD=4.4729;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,123,3259	0/0:7,0:7:21.02:0,21,495	0/0:26,0:26:71.41:0,71,1522	0/0:28,0:28:64.06:0,64,1552	0/0:22,0:22:59.95:0,60,1531	1/1:5,18:24:63.17:2358,63,0	1/1:9,12:24:57.04:1967,57,0	0/0:27,0:27:78.26:0,78,2001	0/0:27,0:27:75.26:0,75,1982	0/0:28,0:28:84.29:0,84,2240	0/0:19,0:19:57.20:0,57,1474	0/0:20,0:20:60.21:0,60,1607	0/0:19,0:19:57.19:0,57,1449	0/0:19,0:19:57.18:0,57,1447	0/0:22,0:22:66.20:0,66,1668	0/0:27,0:27:78.26:0,78,2039	0/0:23,0:23:69.24:0,69,1849	0/0:19,0:19:53.91:0,54,1345	0/0:20,0:20:60.17:0,60,1371	0/0:29,0:29:78.24:0,78,1961	0/0:30,0:30:87.30:0,87,2236	0/0:21,0:21:57.18:0,57,1472	0/0:21,0:21:63.17:0,63,1528	0/0:17,0:17:51.16:0,51,1319	0/0:25,0:25:75.24:0,75,1956	0/0:22,0:22:63.20:0,63,1583	0/0:14,0:14:39.13:0,39,1043	0/0:8,0:8:24.08:0,24,647
chr10	12335602	.	AC	A	15800.19	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=19.436;DP=645;FS=1.785;HRun=1;HaplotypeScore=161.3078;InbreedingCoeff=0.9980;MQ=55.20;MQ0=18;MQRankSum=-3.874;QD=37.62;ReadPosRankSum=4.246;VQSLOD=4.4139;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:78.20:0,78,1168	1/1:0,13:13:36.08:480,36,0	0/0:24,0:12:22.51:0,23,451	0/0:19,0:10:27.09:0,27,431	1/1:0,37:37:99:1335,102,0	1/1:0,22:22:63.17:856,63,0	1/1:1,9:9:24.08:335,24,0	0/0:34,0:33:96.31:0,96,1471	1/1:0,18:18:51.17:708,51,0	1/1:0,25:25:75.25:1038,75,0	1/1:0,22:22:66.13:887,66,0	1/1:0,24:24:69.23:958,69,0	1/1:0,23:23:66.22:916,66,0	1/1:0,28:28:75.25:1044,75,0	1/1:0,27:27:78.26:1089,78,0	1/1:0,13:13:36.12:502,36,0	1/1:0,13:13:33.06:438,33,0	1/1:2,12:14:25.08:442,25,0	0/0:24,0:24:72.21:0,72,1100	0/0:39,0:39:99:0,117,1856	0/0:30,0:30:87.27:0,87,1357	1/1:0,35:35:99:1369,99,0	1/1:0,24:24:56.79:772,57,0	1/1:1,20:21:48.14:651,48,0	0/0:29,0:29:87.28:0,87,1365	1/1:0,27:27:81.23:1085,81,0	1/1:0,15:15:45.15:623,45,0	1/1:0,9:9:21.04:272,21,0
chr10	12337087	.	G	GAAACAAACAAAC	35579.65	PASS	AB=1.000;AC=39;AF=0.696;AN=56;BaseQRankSum=0.135;DP=699;FS=6.487;HRun=0;HaplotypeScore=236.8389;InbreedingCoeff=0.8943;MQ=57.02;MQ0=1;MQRankSum=-11.823;QD=70.88;ReadPosRankSum=0.009;VQSLOD=3.9483;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:72.22:0,72,2185	1/1:8,0:8:21.07:1016,21,0	0/0:21,0:17:15.05:0,15,382	0/0:23,0:21:35.94:0,36,770	1/1:24,0:24:42.13:1799,42,0	1/1:37,0:37:36.01:778,36,0	1/1:30,0:30:29.92:892,30,0	0/0:22,0:22:30.02:0,30,640	1/1:28,0:28:63.12:2523,63,0	1/1:29,0:29:42.61:1642,43,0	1/1:25,0:25:36.12:1689,36,0	1/1:26,0:26:39.13:1864,39,0	1/1:21,1:29:45.15:2211,45,0	1/1:27,0:27:45.15:1888,45,0	1/1:29,0:29:66.11:2868,66,0	1/1:24,0:24:45.12:2102,45,0	1/1:24,0:24:44.11:2031,44,0	0/1:15,0:15:27.21:702,0,27	0/0:19,0:19:36.06:0,36,751	0/0:31,0:31:60.21:0,60,2030	0/0:22,0:22:51.16:0,51,1617	1/1:32,0:32:75.24:3379,75,0	1/1:24,0:23:18.03:829,18,0	1/1:24,0:24:24.08:1189,24,0	0/0:20,0:21:42.14:0,42,1352	1/1:30,0:29:66.23:2859,66,0	1/1:35,0:35:66.19:3113,66,0	1/1:2,0:2:6.02:206,6,0
chr10	12337111	.	C	CA	3563.76	PASS	AB=0.799;AC=20;AF=0.357;AN=56;BaseQRankSum=18.214;DP=718;FS=5.693;HRun=3;HaplotypeScore=186.4046;InbreedingCoeff=-0.5555;MQ=63.45;MQ0=2;MQRankSum=-12.660;QD=6.99;ReadPosRankSum=7.173;VQSLOD=0.3971;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,99,1221	0/1:6,2:8:87.23:87,0,120	0/0:27,0:22:63.19:0,63,760	0/0:25,0:23:69.20:0,69,828	0/1:19,8:27:99:221,0,429	0/1:18,13:31:93.45:93,0,242	0/1:19,6:25:95.68:96,0,372	0/0:25,0:25:72.21:0,72,869	0/1:26,10:36:99:342,0,492	0/1:28,4:32:99:246,0,377	0/1:14,7:21:99:147,0,228	0/1:13,9:22:99:198,0,263	0/1:17,10:27:99:236,0,112	0/1:19,6:25:99:259,0,367	0/1:16,13:29:99:289,0,251	0/1:13,8:21:99:114,0,290	0/1:22,7:29:99:135,0,536	0/1:17,1:18:30.69:31,0,331	0/0:27,0:27:81.23:0,81,979	0/0:27,0:27:75.21:0,75,915	0/0:20,0:20:60.19:0,60,744	0/1:26,11:37:99:379,0,470	0/1:11,5:15:40.06:67,0,40	0/1:21,2:23:60.98:61,0,421	0/0:21,0:21:60.08:0,60,722	0/1:24,8:31:99:322,0,359	0/1:31,10:41:99:201,0,672	0/1:10,0:10:38.52:39,0,262
chr10	12337115	.	A	AAACAAACAACG	25467.22	PASS	AB=0.832;AC=24;AF=0.429;AN=56;BaseQRankSum=4.839;DP=705;FS=4.660;HRun=0;HaplotypeScore=253.2154;InbreedingCoeff=-0.1378;MQ=65.60;MQ0=2;MQRankSum=-10.152;QD=51.04;ReadPosRankSum=-2.652;VQSLOD=4.0532;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,99,2861	0/1:6,2:8:37.42:422,0,37	0/0:26,0:22:56.28:0,56,1054	0/0:24,0:22:66.10:0,66,1367	0/1:21,6:27:38.70:1179,0,39	1/1:16,0:24:29.53:952,30,0	0/1:22,0:28:86.55:743,0,87	0/0:25,0:25:75.19:0,75,1609	0/1:27,8:35:74.99:1855,0,75	0/1:26,4:30:43.19:1555,0,43	0/1:12,6:18:19.54:1192,0,20	0/1:17,8:25:11.27:1614,0,11	1/1:17,7:27:5.38:1929,5,0	0/1:22,4:26:17.28:1126,0,17	0/1:16,11:27:20.48:1974,0,20	1/1:13,7:20:30.21:1419,30,0	0/1:23,7:30:30.28:1683,0,30	0/1:15,1:16:35.62:249,0,36	0/0:26,0:26:78.17:0,78,1654	0/0:26,0:26:78.21:0,78,2362	0/0:23,0:23:66.17:0,66,1968	0/1:28,6:34:70.64:2007,0,71	0/1:11,5:15:0.70:692,0,1	0/1:21,2:23:87.89:456,0,88	0/0:20,0:20:60.16:0,60,1725	1/1:26,6:32:54.25:1857,54,0	0/1:32,9:42:99:2226,0,179	0/1:10,0:10:37.27:337,0,37
chr10	12337343	.	GA	G	10993.70	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=14.724;DP=588;FS=7.301;HRun=3;HaplotypeScore=82.8153;InbreedingCoeff=0.9948;MQ=92.32;MQ0=0;MQRankSum=-4.401;QD=32.15;ReadPosRankSum=5.718;VQSLOD=4.7979;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:93.29:0,93,1308	1/1:1,6:7:15.05:186,15,0	0/0:26,0:26:72.21:0,72,990	0/0:30,0:30:74.68:0,75,1010	1/1:0,20:20:54.17:669,54,0	0/0:27,0:27:78.25:0,78,1099	0/0:20,0:20:60.20:0,60,864	0/0:31,0:31:93.31:0,93,1315	1/1:2,31:33:93.29:1152,93,0	1/1:1,23:24:69.19:818,69,0	1/1:0,19:19:51.15:618,51,0	1/1:1,23:24:63.20:780,63,0	1/1:0,11:11:27.08:335,27,0	1/1:0,19:19:45.14:558,45,0	1/1:1,14:15:24.07:298,24,0	1/1:3,18:21:54.17:663,54,0	1/1:1,16:17:45.14:557,45,0	1/1:0,16:16:48.15:595,48,0	0/0:16,0:16:42.11:0,42,555	0/0:16,0:16:48.14:0,48,655	0/0:29,0:29:87.25:0,87,1196	1/1:0,22:22:54.17:668,54,0	1/1:0,16:16:45.14:558,45,0	1/1:1,26:27:63.20:781,63,0	0/0:19,0:19:54.15:0,54,755	1/1:0,14:14:42.11:497,42,0	1/1:1,31:32:87.27:1078,87,0	1/1:0,5:5:15.05:185,15,0
chr10	12339202	.	G	GA	783.13	PASS	AB=0.923;AC=5;AF=0.089;AN=56;BaseQRankSum=-1.010;DP=548;FS=1.509;HRun=8;HaplotypeScore=74.4864;InbreedingCoeff=0.7440;MQ=58.52;MQ0=2;MQRankSum=1.883;QD=17.80;ReadPosRankSum=0.300;VQSLOD=3.6085;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:21:50.95:0,51,447	0/0:8,0:8:21.01:0,21,192	0/0:16,0:12:17.99:0,18,163	0/0:14,0:7:14.98:0,15,130	0/0:28,0:28:81.02:0,81,736	1/1:2,24:27:66.03:742,66,0	1/1:1,4:5:12.04:139,12,0	0/0:30,0:30:72.01:0,72,650	0/0:23,0:23:57.90:0,58,519	0/0:22,0:22:60:0,60,542	0/0:35,0:35:99:0,99,906	0/0:20,0:20:39.79:0,40,448	0/0:11,0:11:30.02:0,30,275	0/0:14,0:14:39.02:0,39,357	0/0:17,0:17:45.02:0,45,412	0/0:5,0:5:15.01:0,15,137	0/0:29,0:28:75.03:0,75,686	0/0:18,0:18:46.76:0,47,431	0/0:17,0:15:44.03:0,44,384	0/0:29,0:29:84.05:0,84,768	0/0:6,0:6:15.01:0,15,137	0/0:14,0:14:39.02:0,39,357	0/0:31,0:31:81.02:0,81,735	0/1:11,1:12:28.55:29,0,211	0/0:28,0:28:78.03:0,78,714	0/0:27,0:27:75.03:0,75,684	0/0:31,0:31:87:0,87,786	0/0:9,0:9:24.01:0,24,220
chr10	12341536	.	CA	C	1171.44	PASS	AB=0.814;AC=14;AF=0.250;AN=56;BaseQRankSum=15.075;DP=828;FS=7.591;HRun=7;HaplotypeScore=118.3803;InbreedingCoeff=-0.3363;MQ=81.86;MQ0=0;MQRankSum=-9.407;QD=2.96;ReadPosRankSum=0.577;VQSLOD=-0.1139;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:22,9:31:99:136,0,639	0/1:5,3:8:67.66:68,0,165	0/1:13,11:24:99:269,0,229	0/1:20,8:28:99:225,0,302	0/0:34,3:37:18.76:0,19,1156	0/0:27,4:31:20.05:0,20,854	0/1:18,11:29:99:255,0,523	0/1:36,13:49:99:192,0,921	0/0:32,2:34:35.15:0,35,1071	0/1:32,4:36:13.70:14,0,1089	0/1:23,5:28:44.05:44,0,741	0/1:21,4:25:22.53:23,0,685	0/1:29,5:34:26.06:26,0,949	0/0:21,3:24:8.06:0,8,732	0/1:25,6:31:10.50:10,0,812	0/0:16,2:18:14.56:0,15,498	0/0:16,1:17:17.58:0,18,535	0/1:10,1:11:6.53:7,0,240	0/1:33,8:41:50.75:51,0,960	0/0:39,2:41:56.19:0,56,1319	0/0:31,3:34:21.55:0,22,1089	0/0:34,3:37:10.60:0,11,1078	0/0:25,2:27:47.68:0,48,913	0/1:17,4:21:3.96:4,0,584	0/0:27,3:30:41.65:0,42,837	0/0:35,4:39:4.50:0,4,1002	0/0:44,5:49:20.03:0,20,1451	0/0:12,2:14:8.53:0,9,422
chr10	12342944	.	T	TC	14454.16	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=11.167;DP=679;FS=0.993;HRun=5;HaplotypeScore=130.7422;InbreedingCoeff=0.9999;MQ=60.16;MQ0=0;MQRankSum=2.469;QD=34.41;ReadPosRankSum=3.063;VQSLOD=2.7775;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,108,1160	1/1:1,14:15:39.11:497,39,0	0/0:22,0:16:32.97:0,33,393	0/0:17,0:13:30.02:0,30,297	1/1:0,24:24:60.20:788,60,0	0/0:23,0:23:69.16:0,69,734	0/0:20,0:20:48.12:0,48,516	0/0:29,0:28:75.16:0,75,789	1/1:2,23:25:63.20:828,63,0	1/1:4,26:30:84.23:1080,84,0	1/1:1,23:24:60.20:788,60,0	1/1:2,13:15:42.09:533,42,0	1/1:1,24:25:72.23:944,72,0	1/1:2,23:25:66.20:853,66,0	1/1:2,26:28:72.23:938,72,0	1/1:1,21:22:60.20:789,60,0	1/1:2,17:19:48.16:632,48,0	1/1:1,15:16:45.15:592,45,0	0/0:24,0:24:57.14:0,57,612	0/0:33,0:33:69.15:0,69,733	0/0:27,0:27:72.16:0,72,765	1/1:2,29:31:78.25:1026,78,0	1/1:1,26:27:66:866,66,0	1/1:1,14:15:39.13:513,39,0	0/0:26,0:26:61.04:0,61,646	1/1:6,30:35:93.23:1185,93,0	1/1:1,27:28:78.24:1010,78,0	1/1:0,15:15:45.15:592,45,0
chr10	12344246	.	A	ATCT	20636.10	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=7.572;DP=546;FS=12.761;HRun=0;HaplotypeScore=88.7246;InbreedingCoeff=0.9896;MQ=59.16;MQ0=2;MQRankSum=0.335;QD=58.79;ReadPosRankSum=4.538;VQSLOD=6.4315;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:51.17:0,51,849	1/1:1,13:14:36.12:816,36,0	0/0:20,0:14:30.10:0,30,474	0/0:19,0:16:45.04:0,45,618	1/1:2,28:31:69.18:1563,69,0	1/1:2,18:20:51.17:1150,51,0	1/1:0,9:9:27.09:611,27,0	0/0:37,0:37:99:0,99,1600	1/1:0,14:15:39.13:883,39,0	1/1:0,20:19:57.20:1292,57,0	1/1:3,23:28:68.86:1457,69,0	1/1:0,4:3:9.03:204,9,0	1/1:1,15:16:48.16:1078,48,0	1/1:1,17:19:48.16:1088,48,0	1/1:2,17:20:51.18:1156,51,0	1/1:1,9:10:27.05:563,27,0	1/1:3,17:20:48.16:1087,48,0	1/1:1,12:13:30.10:678,30,0	0/0:32,0:30:81.28:0,81,1349	0/0:18,0:18:54.18:0,54,899	0/0:15,0:15:39.11:0,39,621	1/1:3,12:15:39.13:877,39,0	1/1:1,19:20:57.18:1246,57,0	1/1:1,10:11:30.10:680,30,0	0/0:36,0:36:99:0,99,1622	1/1:3,25:27:78.27:1735,78,0	1/1:6,20:27:81.24:1727,81,0	1/1:0,11:11:33.11:747,33,0
chr10	12344970	.	C	CA	14505.30	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-13.045;DP=663;FS=10.122;HRun=2;HaplotypeScore=64.4571;InbreedingCoeff=0.9989;MQ=68.81;MQ0=1;MQRankSum=0.717;QD=34.29;ReadPosRankSum=5.971;VQSLOD=4.2738;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,102,1222	1/1:1,10:11:21.07:297,21,0	0/0:35,0:30:74.71:0,75,859	0/0:26,0:25:72.13:0,72,820	1/1:2,16:17:39.13:550,39,0	1/1:4,17:21:48.07:631,48,0	1/1:1,25:26:72.24:1006,72,0	0/0:31,0:31:84.70:0,85,1000	1/1:2,23:25:60.20:841,60,0	1/1:1,23:23:57.18:787,57,0	1/1:4,14:18:45.15:632,45,0	1/1:2,21:23:54.18:762,54,0	1/1:2,20:23:57.19:796,57,0	1/1:1,21:22:54.18:762,54,0	1/1:1,27:28:72.24:1016,72,0	1/1:1,18:19:45.15:635,45,0	1/1:0,29:29:78.26:1101,78,0	1/1:0,19:18:45.15:635,45,0	0/0:22,0:22:43.89:0,44,719	0/0:28,0:28:81.20:0,81,940	0/0:46,0:44:99:0,100,1373	1/1:1,22:23:60.16:824,60,0	1/1:2,18:19:36.12:503,36,0	1/1:0,22:22:60.15:823,60,0	0/0:15,0:15:42.13:0,42,519	1/1:1,14:15:42.14:592,42,0	1/1:1,28:28:69.10:973,69,0	1/1:0,8:8:24.08:338,24,0
chr10	12345299	.	A	AAC	5097.04	PASS	AB=0.620;AC=44;AF=0.786;AN=56;BaseQRankSum=4.332;DP=542;FS=1.395;HRun=0;HaplotypeScore=177.0149;InbreedingCoeff=0.5243;MQ=61.12;MQ0=3;MQRankSum=-6.487;QD=11.56;ReadPosRankSum=-1.275;VQSLOD=4.5970;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:21:9.07:0,9,304	1/1:5,0:5:8.98:57,9,0	0/0:34,0:23:9.24:0,9,177	0/0:35,0:21:25.38:0,25,284	1/1:29,0:29:17.03:79,17,0	1/1:21,0:24:36.35:314,36,0	1/1:18,0:19:25.74:215,26,0	0/1:14,14:30:7.64:594,0,8	1/1:19,0:19:25.39:162,25,0	1/1:19,0:18:23.68:186,24,0	1/1:19,0:18:10.55:53,11,0	1/1:12,0:18:25.22:125,25,0	1/1:13,0:13:21.88:149,22,0	1/1:10,0:10:16.40:116,16,0	1/1:15,0:17:29:206,29,0	1/1:21,0:21:21.92:155,22,0	1/1:21,0:21:20.15:111,20,0	1/1:12,0:14:1.16:71,1,0	0/1:9,7:15:2.98:282,0,3	0/1:6,20:27:10.14:788,0,10	0/1:6,18:24:7.58:656,0,8	1/1:16,0:16:23.01:164,23,0	1/1:22,0:21:26.59:155,27,0	1/1:7,0:7:5.74:36,6,0	0/0:9,0:10:26.89:0,27,283	1/1:17,0:17:26.41:197,26,0	1/1:25,0:24:14.71:131,15,0	1/1:7,0:7:13.75:95,14,0
chr10	12345322	.	A	AC	619.98	PASS	AB=0.854;AC=22;AF=0.393;AN=56;BaseQRankSum=7.258;DP=558;FS=3.169;HRun=1;HaplotypeScore=148.9187;InbreedingCoeff=-0.3020;MQ=55.48;MQ0=8;MQRankSum=-0.258;QD=1.75;ReadPosRankSum=5.183;VQSLOD=-0.5548;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:51.01:0,51,629	0/1:6,2:8:18.92:19,0,21	0/0:47,0:27:73.45:0,73,772	0/0:39,0:22:50.61:0,51,612	0/0:20,7:27:22.66:0,23,120	1/1:13,12:25:4.51:157,5,0	0/1:8,7:15:1.11:94,0,1	0/1:36,0:36:38.93:39,0,723	0/1:11,6:17:16.46:16,0,40	0/1:22,0:19:13.12:13,0,130	0/1:16,3:18:6.73:7,0,40	0/0:11,3:14:12.84:0,13,76	0/1:12,1:13:16.38:16,0,60	0/1:7,4:11:6.91:22,0,7	0/1:12,6:18:7.94:75,0,8	0/1:11,5:16:10.35:10,0,44	0/1:20,2:22:30.50:30,0,53	0/1:11,3:14:25.33:25,0,90	0/0:25,0:24:10.87:0,11,566	0/1:25,0:25:51.96:52,0,182	0/1:22,0:22:51.81:52,0,64	0/1:9,4:13:11.75:37,0,12	0/1:16,5:21:23.66:24,0,39	1/1:6,1:7:5.03:30,5,0	0/0:11,0:11:29.99:0,30,357	0/0:17,1:18:28.05:0,28,164	0/1:22,2:22:15.59:16,0,125	0/1:6,1:7:20.13:47,0,20
chr10	12345323	.	A	ACACACACACACAC	10271.88	PASS	AB=0.867;AC=28;AF=0.500;AN=56;BaseQRankSum=4.080;DP=557;FS=3.652;HRun=0;HaplotypeScore=223.0521;InbreedingCoeff=0.1788;MQ=55.47;MQ0=8;MQRankSum=-7.104;QD=31.61;ReadPosRankSum=0.397;VQSLOD=4.2281;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:53.68:0,54,1601	1/1:6,2:8:14.65:413,15,0	0/0:46,0:26:64.29:0,64,1203	0/0:41,0:23:41.37:0,41,1127	1/1:20,7:27:3.79:734,4,0	1/1:13,0:25:2.49:127,2,0	0/1:8,0:15:20.68:23,0,21	0/0:37,0:37:99:0,108,2222	0/1:11,0:17:6.03:589,0,6	0/1:22,0:19:39.84:825,0,40	1/1:16,1:18:2.67:392,3,0	0/1:11,0:14:15.65:415,0,16	0/1:12,1:13:42.07:338,0,42	1/1:7,2:11:15.02:497,15,0	1/1:12,0:18:38.76:1022,39,0	1/1:11,5:16:3.24:580,3,0	0/1:20,2:22:28.89:466,0,29	0/1:12,3:15:17.64:1152,0,18	0/0:26,0:25:72:0,72,1094	0/0:25,0:25:75.15:0,75,1855	0/0:19,0:19:51.17:0,51,1358	1/1:9,4:13:17.44:371,17,0	1/1:16,4:21:26.45:873,26,0	0/0:6,1:7:2.80:0,3,13	0/0:10,0:10:30.05:0,30,1036	0/1:17,1:18:99:222,0,116	0/1:22,0:22:31.64:942,0,32	0/1:6,1:7:51.11:292,0,51
chr10	12345851	.	ATCC	A	16394.33	PASS	AC=36;AF=0.692;AN=52;BaseQRankSum=17.895;DP=738;FS=17.802;HRun=0;HaplotypeScore=140.0456;InbreedingCoeff=0.9842;MQ=56.55;MQ0=17;MQRankSum=-2.034;QD=35.33;ReadPosRankSum=5.456;VQSLOD=4.0061;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:63,0:63:99:0,187,4025	1/1:1,7:8:15.05:241,15,0	0/0:29,0:12:36.12:0,36,719	0/0:13,0:6:9.22:0,9,245	1/1:0,19:19:35.71:578,36,0	./.	./.	0/0:34,0:33:75.26:0,75,1623	1/1:3,32:30:66.06:1059,66,0	1/1:2,29:30:87.18:1270,87,0	1/1:1,18:19:33.07:530,33,0	1/1:2,23:25:57.19:911,57,0	1/1:2,22:22:54.18:866,54,0	1/1:2,42:43:99:1686,105,0	1/1:4,36:36:78.27:1246,78,0	1/1:2,29:30:81.28:1300,81,0	1/1:1,28:29:60.20:964,60,0	1/1:0,12:11:24.08:385,24,0	0/0:23,0:19:57.20:0,57,1258	0/0:33,0:33:96.33:0,96,2118	0/0:58,0:58:99:0,160,3454	1/1:2,25:27:54.18:867,54,0	1/1:0,20:19:36.12:578,36,0	1/1:0,29:29:63.21:1007,63,0	0/0:21,0:21:57.20:0,57,1251	1/1:1,27:27:15.24:1178,15,0	1/1:1,34:33:84.29:1344,84,0	1/1:0,8:8:24.08:386,24,0
chr10	12346927	.	AT	A	8450.02	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=15.370;DP=530;FS=1.718;HRun=2;HaplotypeScore=93.5017;InbreedingCoeff=0.9567;MQ=49.76;MQ0=10;MQRankSum=-0.417;QD=27.98;ReadPosRankSum=5.049;VQSLOD=4.4222;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:78.26:0,78,1168	1/1:0,3:3:6.02:78,6,0	0/0:15,0:3:7.27:0,7,83	0/0:19,0:4:9.03:0,9,135	1/1:3,11:14:24.08:312,24,0	0/0:18,0:17:45.15:0,45,671	0/0:24,0:22:30.10:0,30,442	0/0:28,0:21:60.18:0,60,873	1/1:0,17:16:33.11:428,33,0	1/1:3,26:25:66.21:852,66,0	1/1:2,12:13:21.07:271,21,0	1/1:3,11:13:33.11:428,33,0	1/1:1,9:10:21.06:261,21,0	1/1:1,17:15:30.10:389,30,0	1/1:0,18:18:42.14:541,42,0	1/1:0,17:16:39.13:506,39,0	1/1:0,22:22:60.20:779,60,0	1/1:2,20:20:48.16:623,48,0	0/0:12,0:9:27.09:0,27,398	0/0:21,0:21:48.12:0,48,693	0/0:39,0:39:99:0,105,1538	1/1:0,15:13:33.11:428,33,0	1/1:2,8:8:12.04:156,12,0	1/1:2,33:35:78.23:1011,78,0	0/0:20,0:20:54.18:0,54,809	1/1:2,14:14:36.10:453,36,0	1/1:0,19:19:48.16:623,48,0	1/1:0,9:9:24.08:312,24,0
chr10	12349782	.	G	GA	10063.94	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-12.592;DP=524;FS=5.088;HRun=7;HaplotypeScore=48.4572;InbreedingCoeff=0.9591;MQ=64.66;MQ0=0;MQRankSum=-1.159;QD=28.67;ReadPosRankSum=1.962;VQSLOD=5.5266;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:54.01:0,54,511	1/1:3,6:9:18.06:217,18,0	0/0:21,0:16:29.18:0,29,298	0/0:13,0:13:33.04:0,33,312	1/1:4,18:22:60.07:683,60,0	1/1:2,27:29:69.21:834,69,0	1/1:4,10:14:1.12:297,1,0	0/0:26,0:26:66.08:0,66,629	1/1:2,15:17:42.13:507,42,0	1/1:2,25:27:69.20:824,69,0	1/1:0,26:26:69.13:801,69,0	1/1:2,14:16:36.11:435,36,0	1/1:1,12:13:36.11:435,36,0	1/1:2,19:21:57.17:689,57,0	1/1:1,14:15:36.11:435,36,0	1/1:2,16:18:39.12:471,39,0	1/1:1,17:18:35.97:410,36,0	1/1:1,11:11:27.06:312,27,0	0/0:17,0:17:48.07:0,48,461	0/0:34,0:34:96.14:0,96,921	0/0:20,0:20:57.09:0,57,550	1/1:0,15:15:45.14:544,45,0	1/1:4,15:19:36.11:434,36,0	1/1:0,8:8:24.07:290,24,0	0/0:18,0:18:51.08:0,51,492	1/1:2,17:19:51.16:616,51,0	1/1:5,20:25:51.16:613,51,0	1/1:1,7:8:18.06:217,18,0
chr10	12355582	.	GTCTCTGTCTC	G	183.02	PASS	AB=0.989;AC=8;AF=0.143;AN=56;BaseQRankSum=2.025;DP=661;FS=13.058;HRun=0;HaplotypeScore=192.5433;InbreedingCoeff=0.3574;MQ=52.14;MQ0=22;MQRankSum=-1.096;QD=1.39;ReadPosRankSum=-3.466;VQSLOD=1.2663;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:19:30.39:0,30,571	0/0:10,0:10:18.64:0,19,146	0/0:21,0:6:8.01:0,8,55	0/1:21,0:6:1.85:2,0,22	0/0:23,0:22:32.30:0,32,344	1/1:4,28:34:2.52:144,3,0	1/1:9,0:8:12.93:125,13,0	0/0:40,0:39:91.08:0,91,615	0/0:21,0:20:5.89:0,6,49	0/0:41,0:38:44.80:0,45,1371	0/1:21,0:21:21.56:22,0,158	0/1:20,0:20:1.43:1,0,20	0/0:23,0:23:22.28:0,22,867	0/0:13,0:13:20.99:0,21,241	0/0:31,0:31:12.76:0,13,95	0/0:19,0:19:44.10:0,44,592	0/0:33,0:33:44.82:0,45,760	0/0:20,0:20:21.05:0,21,527	0/0:14,0:14:29.67:0,30,361	0/0:27,0:27:40.29:0,40,371	0/0:22,0:20:42.41:0,42,453	0/0:24,0:22:23.16:0,23,250	0/0:22,0:20:41.37:0,41,503	0/1:26,0:26:10.42:10,0,53	0/0:27,0:27:17.05:0,17,1349	0/0:25,0:24:59.08:0,59,653	0/0:36,0:33:28.30:0,28,571	0/0:16,0:15:9.01:0,9,173
chr10	12355588	.	GTC	G	1115.67	PASS	AB=0.904;AC=23;AF=0.442;AN=52;BaseQRankSum=-0.604;DP=664;FS=15.179;HRun=0;HaplotypeScore=125.5522;InbreedingCoeff=-0.2792;MQ=50.92;MQ0=23;MQRankSum=1.323;QD=2.52;ReadPosRankSum=-2.426;VQSLOD=1.3069;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:19:12.90:0,13,165	0/1:9,0:9:18.70:26,0,19	./.	./.	0/1:21,2:21:24.24:26,0,24	0/1:35,0:35:18.71:36,0,19	1/1:11,0:10:6.64:26,7,0	0/0:46,0:45:16.20:0,16,88	1/1:21,0:20:2.55:12,3,0	0/1:32,7:36:99:105,0,192	0/1:14,5:19:6.36:63,0,6	0/1:23,0:22:0.11:0,0,40	0/1:18,4:22:51.59:52,0,168	1/1:12,0:12:5.96:52,6,0	0/0:30,0:29:5.94:0,6,49	0/1:19,2:21:21.90:22,0,68	0/1:26,7:33:23.20:231,0,23	0/1:18,2:20:10.11:105,0,10	0/0:14,0:13:2.09:0,2,24	0/0:27,0:27:11.29:0,11,60	0/0:22,0:20:7.91:0,8,61	0/1:23,3:24:56.68:83,0,57	0/1:23,3:24:29.13:81,0,29	0/0:26,1:27:2.45:0,2,26	0/1:22,4:26:16.26:16,0,266	0/1:24,3:26:53.78:114,0,54	0/1:34,2:33:31.39:182,0,31	1/1:13,0:12:3.89:33,4,0
chr10	12355592	.	C	CTG	3835.58	PASS	AB=0.919;AC=27;AF=0.482;AN=56;BaseQRankSum=-1.574;DP=656;FS=38.234;HRun=0;HaplotypeScore=120.5303;InbreedingCoeff=-0.3026;MQ=50.68;MQ0=27;MQRankSum=3.573;QD=7.32;ReadPosRankSum=4.941;VQSLOD=1.5856;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:21:32.32:0,32,305	1/1:8,0:8:1.79:74,2,0	0/0:15,0:3:6.01:0,6,70	0/0:19,0:2:1.82:0,2,5	1/1:22,1:21:21.28:251,21,0	0/1:35,0:35:0.57:77,0,1	0/1:11,2:12:60.15:118,0,60	0/1:46,0:45:99:219,0,217	1/1:20,2:21:2.57:51,3,0	0/1:40,0:37:52.38:562,0,52	0/1:19,1:20:12.32:132,0,12	0/1:4,19:22:39.61:49,0,40	0/1:22,1:23:87.61:275,0,88	0/1:14,0:14:21.40:101,0,21	0/1:25,0:24:17.68:18,0,21	0/1:19,0:19:2.22:230,0,2	0/1:32,0:32:89.78:181,0,90	0/1:20,1:21:29.77:222,0,30	0/1:13,0:12:83.16:83,0,83	1/1:27,0:27:13.41:186,13,0	1/1:22,0:20:5.37:208,5,0	0/0:15,1:24:5.03:0,5,98	0/1:28,0:26:34.72:247,0,35	0/0:26,0:25:4.16:0,4,13	0/0:22,1:23:5.28:0,5,492	0/1:15,12:26:99:318,0,106	0/1:16,18:32:90.12:210,0,90	0/1:9,0:8:7.96:23,0,8
chr10	12355628	.	C	CTT	2456.04	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=-1.611;DP=599;FS=1.346;HRun=1;HaplotypeScore=120.8674;InbreedingCoeff=0.8345;MQ=64.82;MQ0=14;MQRankSum=-1.407;QD=14.80;ReadPosRankSum=-3.649;VQSLOD=-0.6178;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:27.01:0,27,290	0/0:9,0:9:14.88:0,15,108	0/0:24,0:18:53.83:0,54,526	0/0:40,0:20:36.81:0,37,342	0/0:16,0:14:27.77:0,28,214	1/1:40,0:39:58.01:539,58,0	1/1:11,0:11:32.07:356,32,0	1/1:38,0:38:47.98:813,48,0	0/0:16,0:16:16.41:0,16,146	0/0:33,0:32:67.89:0,68,596	0/0:16,0:16:7.72:0,8,154	0/0:16,0:16:12.27:0,12,246	0/0:21,0:21:12.25:0,12,317	0/0:18,0:18:32.63:0,33,265	0/0:23,0:22:47.38:0,47,386	0/0:19,0:19:42.41:0,42,365	0/0:29,0:29:29.24:0,29,374	0/0:16,0:16:27.22:0,27,212	1/1:14,0:14:19.04:297,19,0	1/1:6,20:27:52.80:444,53,0	1/1:14,0:12:1.13:180,1,0	0/0:20,0:19:26.60:0,27,302	0/0:22,0:21:39.18:0,39,332	0/0:26,0:26:29.54:0,30,268	0/0:16,0:16:20.44:0,20,381	0/0:28,0:27:57.19:0,57,528	0/1:22,0:20:6.55:7,0,203	0/0:8,0:8:15.02:0,15,134
chr10	12355779	.	CAG	C	4749.64	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=12.410;DP=689;FS=3.942;HRun=0;HaplotypeScore=77.6593;InbreedingCoeff=0.9976;MQ=59.68;MQ0=1;MQRankSum=3.626;QD=37.40;ReadPosRankSum=-2.448;VQSLOD=5.9385;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:66.23:0,66,1209	0/0:8,0:8:24.08:0,24,440	0/0:20,0:10:24.08:0,24,381	0/0:22,0:15:45.08:0,45,724	0/0:32,0:32:96.30:0,96,1697	0/0:30,0:30:90.31:0,90,1649	0/0:20,0:20:57.20:0,57,1039	1/1:1,32:32:93.31:1333,93,0	0/0:17,0:17:48.15:0,48,849	0/0:42,0:42:99:0,120,2192	0/0:28,0:28:84.29:0,84,1534	0/0:7,0:7:21.07:0,21,377	0/0:27,0:27:72.25:0,72,1318	0/0:17,0:17:48.16:0,48,872	0/0:22,0:22:54.17:0,54,946	0/0:16,0:15:48.16:0,48,879	0/0:33,0:33:93.29:0,93,1651	0/0:12,0:12:33.07:0,33,569	1/1:2,21:23:63.16:846,63,0	1/1:1,43:43:99:1669,117,0	1/1:1,26:27:63.21:903,63,0	0/0:27,0:27:78.27:0,78,1427	0/0:25,0:25:69.22:0,69,1226	0/0:21,0:21:57.18:0,57,1014	0/0:20,0:20:60.21:0,60,1092	0/0:38,0:38:99:0,108,1924	0/0:38,0:38:99:0,108,1966	0/0:15,0:15:45.15:0,45,806
chr10	12358409	.	T	TGA	4781.07	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-14.723;DP=715;FS=5.670;HRun=0;HaplotypeScore=146.4955;InbreedingCoeff=0.9985;MQ=68.25;MQ0=1;MQRankSum=2.065;QD=38.25;ReadPosRankSum=-2.249;VQSLOD=5.3201;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:84.21:0,84,1056	0/0:12,0:12:27.09:0,27,346	0/0:29,0:21:23.93:0,24,446	0/0:43,0:33:38.29:0,38,542	0/0:33,0:33:81.26:0,81,1048	0/0:27,0:27:78.22:0,78,980	0/0:22,0:22:63.16:0,63,771	1/1:5,22:27:60.15:930,60,0	0/0:28,0:28:75.24:0,75,971	0/0:30,0:30:81.26:0,81,1045	0/0:26,0:26:75.23:0,75,948	0/0:24,0:24:63.20:0,63,811	0/0:16,0:16:45.15:0,45,585	0/0:22,0:22:60.17:0,60,751	0/0:21,0:20:60.18:0,60,766	0/0:24,0:24:69.22:0,69,897	0/0:22,0:22:63.20:0,63,819	0/0:11,0:11:24.08:0,24,308	1/1:7,24:31:39.21:1199,39,0	1/1:6,26:33:69.24:1172,69,0	1/1:1,33:34:87.30:1480,87,0	0/0:19,0:19:48.14:0,48,606	0/0:22,0:22:54.16:0,54,684	0/0:37,0:37:99:0,102,1292	0/0:20,0:20:57.19:0,57,741	0/0:21,0:21:51.16:0,51,658	0/0:35,0:35:96.28:0,96,1208	0/0:14,0:14:39.13:0,39,506
chr10	12359203	.	TA	T	13360.02	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=8.699;DP=573;FS=4.853;HRun=1;HaplotypeScore=59.7339;InbreedingCoeff=0.9910;MQ=83.57;MQ0=0;MQRankSum=-2.632;QD=37.74;ReadPosRankSum=4.570;VQSLOD=5.3495;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,99,1558	1/1:0,13:13:36.12:503,36,0	0/0:15,0:15:33.11:0,33,499	0/0:19,0:19:42.05:0,42,564	1/1:0,29:29:87.18:1152,87,0	0/0:16,0:15:48.15:0,48,737	0/0:23,0:23:69.16:0,69,1006	0/0:35,0:35:99:0,105,1603	1/1:0,17:17:45.15:629,45,0	1/1:0,19:19:57.19:797,57,0	1/1:0,25:25:75.16:1005,75,0	1/1:0,15:15:42.14:587,42,0	1/1:0,10:10:27.09:378,27,0	1/1:0,18:18:51.17:713,51,0	1/1:0,12:12:27.09:378,27,0	1/1:0,22:22:54.18:755,54,0	1/1:0,13:13:33.11:461,33,0	1/1:0,17:17:48.16:671,48,0	0/0:14,0:14:42.13:0,42,649	0/0:22,0:22:66.21:0,66,1020	0/0:21,0:21:60.19:0,60,934	1/1:0,31:31:84.20:1174,84,0	1/1:0,27:27:72.24:1007,72,0	1/1:0,22:22:60.20:839,60,0	0/0:20,0:20:60.19:0,60,934	1/1:0,28:28:81.24:1095,81,0	1/1:0,33:33:78.26:1091,78,0	1/1:0,3:3:9.03:126,9,0
chr10	12359719	.	G	GACACACAC	5178.84	PASS	AB=1.000;AC=36;AF=0.643;AN=56;BaseQRankSum=2.886;DP=513;FS=3.102;HRun=0;HaplotypeScore=174.0436;InbreedingCoeff=0.7399;MQ=71.95;MQ0=6;MQRankSum=-4.668;QD=16.65;ReadPosRankSum=-1.538;VQSLOD=4.1088;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:27:2.99:3,0,1109	1/1:12,0:12:9:99,9,0	0/1:44,0:23:6.53:7,0,61	0/0:32,0:23:2.55:0,3,92	0/0:13,8:22:0.94:0,1,1	0/0:19,0:19:21.07:0,21,346	0/0:14,0:14:19.54:0,20,249	0/0:23,0:23:36.07:0,36,465	1/1:12,1:16:24.38:460,24,0	1/1:12,0:12:24.07:440,24,0	1/1:13,0:13:11.98:125,12,0	1/1:18,0:18:21.39:348,21,0	1/1:4,4:9:6:246,6,0	1/1:13,0:14:14.76:181,15,0	1/1:16,1:18:30.93:645,31,0	1/1:3,5:9:12.04:438,12,0	1/1:14,4:18:12.17:377,12,0	1/1:15,0:14:9.92:208,10,0	0/0:16,0:17:16.76:0,17,453	0/0:18,0:20:39.09:0,39,842	0/0:31,0:31:62.62:0,63,1290	1/1:7,1:8:2.44:121,2,0	1/1:15,0:15:14.97:121,15,0	1/1:21,0:21:14.97:181,15,0	0/0:20,0:23:48.14:0,48,1101	1/1:7,14:22:42.54:827,43,0	1/1:12,0:13:16.82:262,17,0	1/1:6,0:6:9.45:93,9,0
chr10	12359741	.	CAT	C	2511.76	PASS	AB=1.000;AC=28;AF=0.500;AN=56;BaseQRankSum=0.813;DP=540;FS=0.402;HRun=0;HaplotypeScore=107.3474;InbreedingCoeff=0.1168;MQ=58.01;MQ0=7;MQRankSum=1.410;QD=8.05;ReadPosRankSum=-4.763;VQSLOD=2.0676;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:57.07:0,57,1016	0/1:10,0:10:12.05:19,0,12	0/0:37,0:17:9.18:0,9,235	0/0:34,0:23:25.21:0,25,424	0/1:28,0:28:6.41:139,0,6	1/1:1,18:19:21.05:296,21,0	1/1:3,13:16:21:270,21,0	0/0:26,0:26:70.87:0,71,753	0/1:19,0:19:4.46:208,0,4	0/1:13,0:13:24.59:160,0,25	0/1:13,0:13:16.65:82,0,17	1/1:17,0:17:21.77:149,22,0	0/1:10,0:10:6.18:36,0,6	0/1:15,0:15:27.02:104,0,27	1/1:22,0:22:1.36:214,1,0	0/1:11,0:11:6.37:80,0,6	1/1:20,0:20:23.48:156,23,0	0/1:14,0:13:9.34:96,0,9	0/0:20,0:20:5.84:0,6,510	0/0:23,0:22:43.19:0,43,791	0/0:33,0:33:93.03:0,93,1311	1/1:10,0:10:2.13:65,2,0	1/1:18,0:18:6.44:215,6,0	0/1:19,0:19:5.33:79,0,5	0/0:19,0:19:29.30:0,29,741	0/1:21,0:21:62.80:124,0,63	0/1:10,0:10:11.97:79,0,12	1/1:7,0:7:2.71:118,3,0
chr10	12365794	.	A	AT	237.82	PASS	AC=12;AF=0.286;AN=42;BaseQRankSum=1.268;DP=160;FS=0.000;HRun=2;HaplotypeScore=43.8116;InbreedingCoeff=0.5525;MQ=27.20;MQ0=72;MQRankSum=-1.529;QD=5.28;ReadPosRankSum=2.163;VQSLOD=0.6781;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,5:10:16.07:104,16,0	./.	./.	./.	0/0:4,0:3:0.89:0,1,2	0/0:9,0:4:4.98:0,5,24	0/0:8,0:2:4.99:0,5,25	1/1:11,0:4:11.89:83,12,0	0/0:11,0:7:13.93:0,14,90	./.	0/0:3,0:2:4.23:0,4,15	0/0:5,0:2:0.47:0,0,1	0/0:5,0:2:2.04:0,2,6	0/0:7,0:4:5.03:0,5,32	0/0:6,0:4:5:0,5,26	0/0:7,0:6:9.77:0,10,71	0/0:7,0:3:3.38:0,3,38	0/0:6,0:4:8.97:0,9,68	1/1:7,0:3:5.97:44,6,0	1/1:8,0:5:11.75:79,12,0	1/1:3,0:1:2.60:10,3,0	./.	./.	0/0:5,0:5:4.55:0,5,13	1/1:5,0:4:11.09:55,11,0	0/0:3,0:2:3:0,3,27	0/0:6,0:1:2.96:0,3,19	./.
chr10	12365796	.	T	TTCCCCCC	3661.36	PASS	AB=0.917;AC=32;AF=0.727;AN=44;BaseQRankSum=4.516;DP=156;FS=8.129;HRun=0;HaplotypeScore=50.3832;InbreedingCoeff=0.1501;MQ=25.71;MQ0=73;MQRankSum=-4.785;QD=31.03;ReadPosRankSum=3.609;VQSLOD=1.8064;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,5:10:17.99:534,18,0	1/1:2,0:2:2.99:24,3,0	./.	./.	0/0:4,0:3:0.89:0,1,2	0/1:6,0:2:11.92:76,0,12	1/1:6,0:2:6.02:161,6,0	1/1:11,0:4:12.01:371,12,0	0/1:10,0:7:8.75:256,0,9	1/1:4,0:1:0.47:1,0,0	1/1:1,0:2:6.02:163,6,0	0/0:4,0:1:0.47:0,0,1	1/1:4,0:2:3.01:79,3,0	0/1:6,0:3:16.61:144,0,17	1/1:4,0:3:6.02:173,6,0	0/1:7,0:6:17.57:18,0,58	0/0:7,0:3:3.31:0,3,84	1/1:6,0:4:9.03:221,9,0	1/1:5,2:3:6.02:226,6,0	1/1:4,4:5:15.05:524,15,0	./.	./.	./.	1/1:3,0:5:9.03:198,9,0	1/1:2,2:4:12.04:416,12,0	0/0:3,0:2:3:0,3,27	1/1:6,0:1:3.01:79,3,0	./.
chr10	12365801	.	AAT	A	555.94	PASS	AC=24;AF=0.857;AN=28;BaseQRankSum=0.722;DP=116;FS=0.000;HRun=0;HaplotypeScore=54.0623;InbreedingCoeff=0.2728;MQ=15.21;MQ0=85;MQRankSum=-0.914;QD=8.42;ReadPosRankSum=2.165;VQSLOD=2.6357;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,5:5:14.04:115,14,0	./.	./.	./.	./.	1/1:5,1:1:3:29,3,0	1/1:4,2:1:3:28,3,0	./.	1/1:5,1:1:3:28,3,0	./.	1/1:2,2:2:6.01:63,6,0	./.	1/1:4,1:1:3:26,3,0	1/1:4,1:1:3:27,3,0	1/1:2,1:1:3:26,3,0	./.	0/0:6,0:2:2.98:0,3,22	./.	1/1:5,2:2:6.02:66,6,0	1/1:3,4:4:12:106,12,0	0/0:2,1:1:2.90:0,3,16	./.	./.	1/1:3,2:3:5.99:50,6,0	1/1:2,3:3:9.01:85,9,0	./.	./.	./.
chr10	12368819	.	C	CA	9376.87	PASS	AB=0.587;AC=33;AF=0.589;AN=56;BaseQRankSum=12.106;DP=531;FS=7.400;HRun=5;HaplotypeScore=82.7297;InbreedingCoeff=0.7933;MQ=58.39;MQ0=4;MQRankSum=2.839;QD=26.64;ReadPosRankSum=3.531;VQSLOD=4.6780;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:63.15:0,63,675	1/1:1,12:13:36.11:447,36,0	0/0:19,0:7:15.02:0,15,152	0/0:15,0:10:8.31:0,8,204	1/1:4,24:28:59.67:709,60,0	0/0:16,0:16:45.11:0,45,484	0/0:6,0:6:15.04:0,15,161	0/0:28,0:28:72.14:0,72,758	1/1:3,13:16:15.53:388,16,0	1/1:7,22:29:51.09:744,51,0	1/1:1,20:22:56.97:669,57,0	1/1:2,9:11:6.02:277,6,0	1/1:1,11:12:27.08:332,27,0	1/1:0,9:9:21.07:259,21,0	1/1:2,19:21:39.08:467,39,0	1/1:1,12:13:36.11:446,36,0	0/1:13,13:27:0.99:508,0,1	0/1:4,19:23:6.05:575,0,6	0/0:13,0:11:33.03:0,33,334	0/0:23,0:23:60.15:0,60,645	0/0:9,0:9:21.05:0,21,226	1/1:1,21:22:57.16:691,57,0	1/1:14,16:30:30.93:637,31,0	1/1:1,9:10:27.09:335,27,0	0/0:22,0:22:60.15:0,60,645	1/1:6,19:25:44.98:765,45,0	1/1:3,33:36:81.25:993,81,0	0/1:1,4:5:17.20:133,0,17
chr10	12372727	.	ACCC	A	10827.28	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=7.206;DP=488;FS=25.166;HRun=11;HaplotypeScore=98.5990;InbreedingCoeff=0.9598;MQ=65.26;MQ0=6;MQRankSum=-1.276;QD=31.02;ReadPosRankSum=7.407;VQSLOD=1.8175;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:36.12:0,36,683	1/1:1,3:4:9.03:118,9,0	0/0:18,0:14:15.39:0,15,214	0/0:16,0:8:9.76:0,10,215	1/1:2,12:14:27:316,27,0	1/1:2,21:23:57.16:749,57,0	1/1:1,22:21:57.19:749,57,0	0/0:11,0:11:18.06:0,18,364	1/1:2,17:19:42.08:533,42,0	1/1:4,12:15:39.12:512,39,0	1/1:1,8:9:24.08:315,24,0	1/1:2,14:16:36.11:473,36,0	1/1:3,15:18:36.11:473,36,0	1/1:3,13:16:39.11:512,39,0	1/1:3,17:20:48.58:613,49,0	1/1:4,20:24:57.16:749,57,0	1/1:5,30:35:84.25:1104,84,0	1/1:0,20:20:57.14:730,57,0	0/0:16,0:16:30.07:0,30,519	0/0:4,0:14:35.87:0,36,281	0/0:21,0:21:48.11:0,48,802	1/1:1,8:9:24.08:315,24,0	1/1:0,19:19:48.58:612,49,0	1/1:5,18:23:51.15:670,51,0	0/0:13,0:15:39.07:0,39,617	1/1:1,12:13:36.10:455,36,0	1/1:4,21:24:57.16:749,57,0	1/1:1,2:3:6.02:79,6,0
chr10	12372909	.	AAAAC	A	945.83	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.696;DP=460;FS=2.931;HRun=0;HaplotypeScore=72.0439;InbreedingCoeff=0.8438;MQ=65.51;MQ0=3;MQRankSum=-1.741;QD=31.53;ReadPosRankSum=0.572;VQSLOD=3.5021;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:78.25:0,78,1844	0/0:5,0:5:12.04:0,12,298	0/0:23,0:15:23.71:0,24,592	0/0:20,0:12:14.73:0,15,157	0/0:26,0:26:72.25:0,72,1773	1/1:1,14:15:39.13:670,39,0	1/1:4,11:15:24.08:396,24,0	0/0:24,0:24:63.18:0,63,1369	0/0:15,0:15:45.15:0,45,1126	0/0:18,0:18:54.18:0,54,1309	0/0:16,0:16:45.13:0,45,1078	0/0:14,0:14:33.10:0,33,744	0/0:4,0:4:11.99:0,12,243	0/0:17,0:17:45.15:0,45,1058	0/0:17,0:17:39.13:0,39,907	0/0:12,0:12:30.10:0,30,754	0/0:15,0:15:42.08:0,42,995	0/0:16,0:16:48.13:0,48,1101	0/0:14,0:14:30.09:0,30,621	0/0:26,0:26:72.25:0,72,1785	0/0:4,0:4:12.04:0,12,274	0/0:11,0:11:27.09:0,27,676	0/0:18,0:18:48.14:0,48,1111	0/0:4,0:4:3.01:0,3,75	0/0:23,0:23:66.23:0,66,1641	0/0:22,0:22:63.17:0,63,1455	0/0:30,0:30:81.26:0,81,1905	0/0:3,0:3:9.03:0,9,217
chr10	12373219	.	CA	C	643.67	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.718;DP=590;FS=1.606;HRun=7;HaplotypeScore=53.3632;InbreedingCoeff=0.9897;MQ=69.90;MQ0=1;MQRankSum=0.445;QD=20.76;ReadPosRankSum=0.540;VQSLOD=3.0612;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:57.17:0,57,704	0/0:7,0:7:18.06:0,18,226	0/0:17,0:16:25.08:0,25,355	0/0:7,0:7:18.05:0,18,217	0/0:34,0:34:99:0,102,1262	1/1:3,17:20:42.09:428,42,0	1/1:0,11:11:33.08:337,33,0	0/0:16,0:16:48.15:0,48,601	0/0:22,0:22:60.19:0,60,755	0/0:28,0:28:81.26:0,81,1019	0/0:32,0:32:90.27:0,90,1114	0/0:12,0:12:36.11:0,36,441	0/0:23,0:23:63.20:0,63,792	0/0:22,0:22:63.20:0,63,793	0/0:16,0:16:48.15:0,48,604	0/0:19,0:19:51.14:0,51,616	0/0:20,0:20:59.94:0,60,708	0/0:22,0:22:51.13:0,51,622	0/0:19,0:19:51.15:0,51,626	0/0:28,0:28:81.25:0,81,1003	0/0:8,0:8:24.08:0,24,302	0/0:23,0:23:63.19:0,63,776	0/0:23,0:23:69.20:0,69,853	0/0:19,0:19:54.16:0,54,667	0/0:27,0:27:81.26:0,81,1019	0/0:27,0:27:81.26:0,81,1019	0/0:39,0:39:99:0,108,1333	0/0:27,0:27:74.93:0,75,943
chr10	12373582	.	G	GCTCGCTCT	1254.91	PASS	AB=0.949;AC=12;AF=0.214;AN=56;BaseQRankSum=-1.726;DP=587;FS=8.293;HRun=0;HaplotypeScore=169.4711;InbreedingCoeff=0.3564;MQ=67.98;MQ0=17;MQRankSum=-3.448;QD=6.50;ReadPosRankSum=-4.670;VQSLOD=0.1581;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:25:12.72:0,13,325	0/0:8,0:8:11.84:0,12,80	0/0:31,0:23:41.33:0,41,467	0/0:30,0:19:44.76:0,45,450	0/0:14,0:13:24.44:0,24,200	0/1:26,0:25:58.77:59,0,321	0/1:17,0:17:55.29:55,0,217	1/1:36,0:34:59.56:435,60,0	0/0:26,0:26:59.68:0,60,626	0/0:28,0:25:65.15:0,65,718	0/0:16,0:14:20.98:0,21,175	0/0:17,0:17:41.32:0,41,581	0/0:15,0:19:41.87:0,42,433	0/0:20,0:20:42.17:0,42,447	0/0:18,0:22:47.98:0,48,469	0/0:21,0:26:56.87:0,57,637	0/0:15,0:15:21.93:0,22,359	0/1:16,0:15:16.18:16,0,182	1/1:7,11:18:35.23:358,35,0	1/1:22,0:22:32.82:224,33,0	0/1:16,0:15:29.93:93,0,30	0/0:21,0:20:41.99:0,42,461	0/0:17,0:17:29.96:0,30,249	0/0:18,0:19:29.95:0,30,285	0/0:19,0:19:42:0,42,394	0/0:19,0:21:56.44:0,56,501	0/1:15,0:27:99:154,0,198	0/1:13,0:13:30.87:31,0,146
chr10	12373885	.	TGAAATGGGAGAAAAGCAGG	T	36507.99	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=17.836;DP=630;FS=9.923;HRun=0;HaplotypeScore=337.0071;InbreedingCoeff=0.9733;MQ=70.79;MQ0=0;MQRankSum=-17.606;QD=101.13;ReadPosRankSum=7.117;VQSLOD=3.4422;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,123,10007	1/1:4,10:14:24.08:1296,24,0	0/0:27,0:27:72.25:0,72,4438	0/0:22,0:21:53.85:0,54,3302	1/1:2,11:12:24.08:1244,24,0	0/0:29,0:29:87.30:0,87,7594	0/0:31,0:31:93.32:0,93,7920	0/0:24,0:24:72.24:0,72,4680	1/1:3,24:27:63.22:3421,63,0	1/1:3,20:23:60.17:2620,60,0	1/1:5,17:22:45.02:2400,45,0	1/1:4,25:29:66.21:3486,66,0	1/1:4,8:12:21.07:1140,21,0	1/1:4,21:25:48.16:2607,48,0	1/1:8,21:29:54.19:2899,54,0	1/1:4,16:20:42.14:2281,42,0	1/1:6,9:15:18.06:962,18,0	1/1:1,5:6:9.03:489,9,0	0/0:25,0:25:75.25:0,75,5625	0/0:29,0:29:78.27:0,78,5815	0/0:30,0:30:90.31:0,90,7197	1/1:2,23:25:51.18:2730,51,0	1/1:4,14:18:33.02:1742,33,0	1/1:4,13:17:26.05:1413,26,0	0/0:11,0:11:30.10:0,30,2310	1/1:9,21:30:60.20:3204,60,0	1/1:5,21:26:42.08:2249,42,0	1/1:2,8:10:6.02:326,6,0
chr10	12374286	.	GCACACACA	G	1147.66	PASS	AB=0.877;AC=24;AF=0.600;AN=40;BaseQRankSum=3.987;DP=500;FS=2.471;HRun=0;HaplotypeScore=126.4160;InbreedingCoeff=0.2271;MQ=69.69;MQ0=6;MQRankSum=-4.560;QD=4.38;ReadPosRankSum=-2.251;VQSLOD=2.1549;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:26:24.06:0,24,755	./.	./.	./.	0/1:13,3:16:13.98:14,0,39	./.	./.	0/1:19,0:18:0:0,0,0	0/1:10,4:14:14.92:138,0,15	0/1:20,1:21:74.55:75,0,78	./.	1/1:12,3:16:6.49:130,6,0	1/1:12,1:13:5.60:129,6,0	0/0:9,0:9:3.01:0,3,42	1/1:12,4:17:8.92:203,9,0	1/1:12,4:17:6.02:137,6,0	1/1:19,3:21:6.01:147,6,0	0/0:12,0:12:8.94:0,9,80	./.	1/1:20,0:26:10.28:168,10,0	./.	1/1:13,0:13:2.59:10,3,0	1/1:17,0:18:3:56,3,0	1/1:17,0:17:3:50,3,0	0/0:23,0:23:21.02:0,21,559	0/0:13,0:13:8.98:0,9,93	0/1:15,0:17:14.64:23,0,15	0/1:12,0:15:6.90:7,0,56
chr10	12374546	.	TGAAA	T	16344.73	PASS	AB=0.565;AC=47;AF=0.839;AN=56;BaseQRankSum=10.735;DP=573;FS=11.900;HRun=0;HaplotypeScore=127.0932;InbreedingCoeff=0.8596;MQ=71.21;MQ0=0;MQRankSum=-3.360;QD=34.05;ReadPosRankSum=3.528;VQSLOD=4.2223;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:84.24:0,84,1942	1/1:2,6:8:15.05:258,15,0	0/0:20,0:20:34.14:0,34,903	0/0:20,0:19:30.03:0,30,654	1/1:4,14:18:33.11:566,33,0	1/1:3,23:26:54.18:927,54,0	1/1:2,12:14:27.09:463,27,0	1/1:7,16:23:48.14:769,48,0	1/1:3,20:23:45.15:769,45,0	1/1:4,13:17:36.12:613,36,0	1/1:1,14:15:30.10:515,30,0	1/1:7,15:22:36.12:618,36,0	1/1:1,20:21:51.17:875,51,0	1/1:2,17:19:42.14:717,42,0	1/1:2,16:18:39.13:669,39,0	1/1:3,13:16:24.08:412,24,0	1/1:9,18:27:15.99:884,16,0	0/1:3,10:13:12.17:435,0,12	1/1:6,17:23:51.15:808,51,0	1/1:6,25:31:51.17:875,51,0	1/1:10,15:25:33.11:566,33,0	1/1:5,18:23:48.16:824,48,0	1/1:5,13:18:36.12:618,36,0	1/1:6,21:27:57.16:978,57,0	0/0:22,0:22:57.20:0,57,1429	1/1:2,25:27:75.24:1259,75,0	1/1:1,19:20:42.14:721,42,0	1/1:1,5:6:12.04:206,12,0
chr10	12375049	.	C	CA	17632.98	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-16.904;DP=693;FS=0.000;HRun=4;HaplotypeScore=63.5352;InbreedingCoeff=0.9823;MQ=78.33;MQ0=0;MQRankSum=-3.084;QD=36.81;ReadPosRankSum=3.414;VQSLOD=4.7914;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,138,1556	1/1:0,17:17:48.16:657,48,0	0/0:17,0:17:27.17:0,27,419	0/0:27,0:27:70.89:0,71,751	1/1:0,44:44:99:1783,132,0	1/1:0,23:23:63.21:862,63,0	1/1:2,17:19:48.16:657,48,0	0/0:32,0:32:93.26:0,93,1046	1/1:0,18:18:45.15:609,45,0	1/1:1,29:30:87.29:1189,87,0	1/1:0,25:25:69.23:944,69,0	1/1:3,16:19:42.14:575,42,0	1/1:2,13:15:39.13:534,39,0	1/1:2,19:21:57.19:780,57,0	1/1:0,28:28:81.27:1108,81,0	1/1:0,19:19:54.18:739,54,0	1/1:3,23:26:66.22:898,66,0	1/1:0,10:10:27.09:369,27,0	0/0:15,0:15:45.13:0,45,511	0/0:38,0:38:99:0,102,1146	0/0:15,0:15:42.12:0,42,476	1/1:2,26:28:78.26:1067,78,0	1/1:1,34:35:96.32:1313,96,0	1/1:4,27:31:72.24:985,72,0	0/0:21,0:21:63.18:0,63,714	1/1:1,27:28:81.23:1088,81,0	1/1:3,35:37:99:1395,102,0	1/1:3,2:5:6.02:82,6,0
chr10	12375791	.	TTTC	T	1284.64	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=14.135;DP=532;FS=15.485;HRun=0;HaplotypeScore=91.0281;InbreedingCoeff=-0.2224;MQ=61.89;MQ0=11;MQRankSum=-1.544;QD=3.85;ReadPosRankSum=10.412;VQSLOD=-0.6413;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:78.78:0,79,1119	0/1:9,0:9:27.37:38,0,27	0/0:22,0:10:15.17:0,15,140	0/0:26,0:15:26.05:0,26,257	0/1:20,0:20:63.66:99,0,64	1/1:1,10:11:12.04:175,12,0	1/1:2,9:10:12.04:184,12,0	0/0:32,0:31:13.38:0,13,408	0/1:16,0:16:35.78:85,0,36	0/1:24,0:24:43.93:44,0,206	0/1:27,0:27:42.18:42,0,252	0/1:23,0:23:50.01:50,0,118	0/1:13,0:13:1.83:83,0,2	0/1:10,0:10:15.74:16,0,119	0/1:21,0:21:93.22:101,0,93	0/1:12,0:12:1.78:75,0,2	0/1:24,0:24:35.34:104,0,35	0/1:23,0:23:64.40:64,0,135	0/0:28,0:25:56.16:0,56,490	0/0:28,0:28:66.57:0,67,550	0/0:5,0:3:4.83:0,5,47	0/1:16,0:15:57.24:57,0,60	0/1:20,0:20:72.21:72,0,76	1/1:11,0:10:7.32:44,7,0	0/0:26,0:26:74.99:0,75,1018	0/1:11,0:11:13.10:13,0,103	0/1:19,0:19:84.54:85,0,131	0/1:13,0:12:23.70:24,0,110
chr10	12375794	.	CTTT	C	4919.34	PASS	AB=0.636;AC=38;AF=0.679;AN=56;BaseQRankSum=3.304;DP=518;FS=5.594;HRun=14;HaplotypeScore=78.9009;InbreedingCoeff=0.7930;MQ=60.91;MQ0=11;MQRankSum=0.561;QD=15.14;ReadPosRankSum=5.554;VQSLOD=3.4492;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,1:32:43.13:0,43,1209	1/1:2,7:10:17.98:193,18,0	0/0:21,0:9:5.98:0,6,56	0/0:25,0:15:11.28:0,11,109	1/1:6,12:19:38.90:427,39,0	1/1:10,0:10:11.90:90,12,0	1/1:10,0:9:12:104,12,0	0/0:23,0:30:42.05:0,42,351	1/1:3,12:16:26.97:298,27,0	1/1:10,13:24:35.41:396,35,0	0/1:12,14:27:0.81:220,0,1	1/1:6,14:21:26.89:298,27,0	1/1:1,13:14:20.97:245,21,0	1/1:9,1:10:8.86:89,9,0	1/1:6,14:20:26.92:315,27,0	1/1:2,11:13:23.64:253,24,0	1/1:7,16:23:35.63:393,36,0	0/1:9,12:22:11.19:236,0,11	0/0:17,0:24:33.89:0,34,251	0/0:10,0:27:43.09:0,43,356	0/0:2,0:3:4.26:0,4,44	1/1:5,9:15:22.49:258,22,0	1/1:5,10:17:28.26:330,28,0	1/1:4,5:10:8.61:134,9,0	0/0:23,0:25:57.15:0,57,939	1/1:4,6:10:14.94:164,15,0	1/1:8,11:19:27.42:316,27,0	1/1:7,5:12:14.87:158,15,0
chr10	12378408	.	TGAGAGAGA	T	1209.77	PASS	AB=0.838;AC=17;AF=0.327;AN=52;BaseQRankSum=3.409;DP=506;FS=25.456;HRun=0;HaplotypeScore=148.3704;InbreedingCoeff=0.1296;MQ=73.27;MQ0=6;MQRankSum=-6.578;QD=5.38;ReadPosRankSum=-0.850;VQSLOD=1.1196;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:35:24.05:0,24,334	0/1:6,0:7:6.91:7,0,66	./.	0/1:27,0:18:0:0,0,0	1/1:13,8:22:2.74:56,3,0	./.	0/0:17,0:17:26.12:0,26,831	0/0:31,0:28:9.50:0,10,143	0/1:15,9:25:20.89:409,0,21	0/0:16,0:20:27.04:0,27,329	0/1:11,2:14:76.98:126,0,77	1/1:10,9:20:20.96:465,21,0	0/1:23,3:26:33.63:140,0,34	1/1:11,2:13:3.01:58,3,0	0/0:11,0:14:12.04:0,12,245	0/1:10,1:15:66.33:66,0,150	0/0:14,0:16:9.01:0,9,119	0/0:8,0:13:15:0,15,150	0/0:18,0:15:7.73:0,8,75	0/0:11,0:12:18.03:0,18,248	1/1:12,0:12:2.37:8,2,0	0/1:14,0:17:9.26:9,0,74	0/1:11,0:14:9.90:10,0,36	0/1:10,0:13:3.93:4,0,74	0/0:8,0:9:9.01:0,9,126	0/0:22,0:22:14.74:0,15,176	0/0:18,0:22:6.46:0,6,66	0/0:3,0:3:5.99:0,6,50
chr10	12378455	.	GTT	G	672.88	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=0.765;DP=457;FS=15.480;HRun=2;HaplotypeScore=83.0296;InbreedingCoeff=0.7663;MQ=66.94;MQ0=13;MQRankSum=-1.955;QD=16.02;ReadPosRankSum=-0.241;VQSLOD=-0.3541;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:74.59:0,75,1073	0/0:7,0:7:21.05:0,21,330	0/0:24,0:11:6.68:0,7,340	0/0:28,0:20:34.37:0,34,658	0/0:22,0:22:46.91:0,47,642	1/1:0,18:18:3.01:36,3,0	1/1:22,2:24:57.66:746,58,0	0/0:26,0:26:68.03:0,68,1142	0/0:20,0:20:39.73:0,40,542	0/0:17,0:16:21.29:0,21,468	0/0:11,0:11:24.94:0,25,350	0/0:18,0:18:36.76:0,37,369	0/0:12,0:12:25.25:0,25,392	0/0:12,0:12:27.09:0,27,452	0/0:14,0:14:34.87:0,35,506	0/0:13,0:13:26.41:0,26,472	0/0:15,0:15:42.12:0,42,606	0/0:14,0:13:32.84:0,33,465	0/0:23,0:21:52.49:0,52,893	0/0:13,0:13:33.54:0,34,515	0/0:14,0:14:33.10:0,33,484	0/0:9,0:9:17.29:0,17,262	0/0:10,0:10:21.36:0,21,326	0/0:15,0:15:36.01:0,36,505	0/0:12,0:11:27.56:0,28,444	0/0:17,0:17:51.17:0,51,868	0/0:15,0:15:35.84:0,36,563	0/0:5,0:5:2.65:0,3,147
chr10	12379502	.	C	CTTT	18623.22	PASS	AB=0.889;AC=41;AF=0.732;AN=56;BaseQRankSum=-2.721;DP=569;FS=6.695;HRun=1;HaplotypeScore=80.8988;InbreedingCoeff=0.9128;MQ=65.49;MQ0=0;MQRankSum=-9.714;QD=49.66;ReadPosRankSum=1.908;VQSLOD=4.9440;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,114,1975	1/1:1,8:9:21.06:452,21,0	0/0:24,0:20:51.17:0,51,845	0/0:28,0:22:48.16:0,48,766	1/1:2,14:16:38.40:870,38,0	1/1:0,21:21:54.19:1275,54,0	1/1:0,12:12:21.07:495,21,0	0/1:21,3:22:8.64:9,0,892	1/1:0,16:15:39.13:921,39,0	1/1:4,15:17:51.18:1177,51,0	1/1:2,17:20:45.06:929,45,0	1/1:2,16:18:51.18:1195,51,0	1/1:0,11:11:30.10:709,30,0	1/1:2,18:21:45.15:1037,45,0	1/1:1,14:16:30.10:709,30,0	1/1:0,10:10:21.03:445,21,0	1/1:4,22:26:51.17:1174,51,0	1/1:1,13:14:33.11:779,33,0	0/0:30,0:28:78.24:0,78,1322	0/0:17,0:17:51.17:0,51,899	0/0:42,0:42:99:0,123,2135	1/1:0,19:22:48.12:1051,48,0	1/1:1,28:29:54.19:1259,54,0	1/1:2,12:16:33.11:780,33,0	0/0:13,0:13:36.12:0,36,635	1/1:2,19:22:66.20:1496,66,0	1/1:0,22:24:69.19:1578,69,0	1/1:0,4:6:12.04:284,12,0
chr10	12381311	.	T	TA	13066.09	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-5.839;DP=569;FS=1.235;HRun=8;HaplotypeScore=56.4566;InbreedingCoeff=0.9424;MQ=59.33;MQ0=2;MQRankSum=3.887;QD=26.56;ReadPosRankSum=1.670;VQSLOD=5.5959;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:21:57.01:0,57,517	1/1:1,9:10:20.96:224,21,0	0/0:16,0:8:11.96:0,12,101	0/0:18,0:8:8.79:0,9,66	1/1:6,32:38:62.74:959,63,0	1/1:3,23:25:66.20:762,66,0	1/1:3,18:20:42.12:482,42,0	1/1:13,14:22:23.69:421,24,0	1/1:2,20:22:48.14:554,48,0	1/1:3,14:17:45.13:515,45,0	1/1:3,25:28:60.18:692,60,0	1/1:1,20:21:51.15:589,51,0	1/1:1,10:11:30.09:346,30,0	1/1:5,13:16:39.11:444,39,0	1/1:4,12:15:32.86:381,33,0	1/1:1,17:18:51.15:589,51,0	1/1:3,33:36:87.26:1002,87,0	1/1:1,8:9:24.07:277,24,0	1/1:3,14:14:39.12:450,39,0	1/1:2,21:23:60.14:676,60,0	1/1:1,10:11:27.08:312,27,0	1/1:2,21:23:60.18:692,60,0	1/1:2,20:22:57.17:658,57,0	1/1:1,17:18:48.14:554,48,0	0/0:21,0:21:53.99:0,54,482	1/1:4,15:19:42.12:485,42,0	1/1:6,33:38:81.24:935,81,0	1/1:0,2:2:6.02:69,6,0
chr10	12382607	.	AT	A	5294.68	PASS	AB=0.750;AC=53;AF=0.946;AN=56;BaseQRankSum=-2.109;DP=390;FS=0.000;HRun=1;HaplotypeScore=97.5430;InbreedingCoeff=0.3721;MQ=37.82;MQ0=6;MQRankSum=-1.521;QD=13.75;ReadPosRankSum=2.078;VQSLOD=4.0079;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,7:5:14.80:103,15,0	1/1:0,12:12:29.89:233,30,0	1/1:5,0:3:5.94:43,6,0	0/1:2,0:2:8.24:9,0,8	1/1:1,30:30:32.94:269,33,0	1/1:2,19:18:29.92:237,30,0	1/1:1,4:5:8.98:73,9,0	1/1:1,13:12:32.82:243,33,0	1/1:3,20:17:32.95:279,33,0	1/1:1,18:15:41.48:288,41,0	1/1:0,23:23:38.94:320,39,0	1/1:0,18:16:38.92:314,39,0	1/1:0,15:14:20.95:168,21,0	1/1:0,11:10:14.98:123,15,0	1/1:1,11:11:20.95:167,21,0	1/1:0,16:15:29.91:235,30,0	1/1:2,15:15:26.94:216,27,0	1/1:2,8:8:11.95:91,12,0	1/1:1,9:8:23.59:154,24,0	1/1:1,24:25:64.83:422,65,0	1/1:0,4:4:8.79:52,9,0	1/1:0,11:11:26.96:221,27,0	1/1:1,12:10:8.97:71,9,0	1/1:0,3:3:3:25,3,0	1/1:0,21:20:50.42:362,50,0	1/1:1,19:18:53.37:364,53,0	1/1:1,15:13:26.92:211,27,0	0/0:1,4:4:2.97:0,3,20
chr10	12383115	.	C	CA	14799.41	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-5.089;DP=596;FS=9.335;HRun=6;HaplotypeScore=92.7049;InbreedingCoeff=0.9854;MQ=70.24;MQ0=4;MQRankSum=-2.834;QD=29.84;ReadPosRankSum=3.128;VQSLOD=4.8703;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:84.18:0,84,857	1/1:0,12:12:36.12:453,36,0	0/0:23,0:17:34.05:0,34,405	0/0:18,0:14:10.57:0,11,329	1/1:0,24:24:57.18:717,57,0	1/1:4,21:25:54.13:661,54,0	1/1:1,10:11:30.05:359,30,0	1/1:4,19:22:54.07:630,54,0	1/1:2,18:20:48.15:600,48,0	1/1:2,17:19:54.17:670,54,0	1/1:4,19:23:51.16:642,51,0	1/1:2,20:22:60.19:755,60,0	1/1:3,23:26:60.19:755,60,0	1/1:2,20:22:51.16:641,51,0	1/1:1,21:22:51.16:631,51,0	1/1:4,18:22:48.15:604,48,0	1/1:1,36:37:96.31:1207,96,0	1/1:4,28:30:72.23:906,72,0	1/1:5,21:25:60.16:736,60,0	1/1:1,12:13:33.11:415,33,0	1/1:4,19:23:48.15:604,48,0	1/1:2,15:17:36.12:453,36,0	1/1:2,12:14:33.06:397,33,0	1/1:1,13:14:39.12:491,39,0	0/0:21,0:21:42.08:0,42,423	1/1:1,11:12:33.11:415,33,0	1/1:0,26:26:65.84:830,66,0	1/1:0,11:11:18.06:226,18,0
chr10	12384430	.	G	GAA	17024.63	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-2.794;DP=659;FS=3.618;HRun=8;HaplotypeScore=81.3645;InbreedingCoeff=0.9944;MQ=67.87;MQ0=1;MQRankSum=-0.685;QD=36.30;ReadPosRankSum=3.534;VQSLOD=4.9335;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:93.18:0,93,1004	1/1:2,6:8:12.04:191,12,0	0/0:20,0:18:27.05:0,27,289	0/0:16,0:12:30.03:0,30,322	1/1:3,36:41:99:1593,108,0	1/1:1,19:22:59.69:913,60,0	1/1:0,12:14:33.11:505,33,0	0/0:42,0:41:99:0,111,1218	1/1:1,18:20:42.14:664,42,0	1/1:6,24:29:69.14:1016,69,0	1/1:7,16:24:48.12:734,48,0	1/1:2,15:17:33.11:524,33,0	1/1:3,29:32:74.94:1150,75,0	1/1:1,13:14:33.11:524,33,0	1/1:5,19:24:45.15:714,45,0	1/1:2,24:26:63.19:975,63,0	1/1:3,31:35:72.24:1122,72,0	1/1:0,18:19:56.68:865,57,0	0/0:13,0:13:33.07:0,33,367	0/0:26,0:26:66.15:0,66,729	0/0:16,0:16:39.08:0,39,424	1/1:3,25:29:74.69:1098,75,0	1/1:1,19:22:50.65:752,51,0	1/1:1,13:14:36.12:571,36,0	0/0:22,0:22:63.17:0,63,702	1/1:4,24:27:69.21:1068,69,0	1/1:4,22:27:79.29:1161,79,0	1/1:0,22:23:57.19:886,57,0
chr10	12386022	.	CTATTT	C	23736.99	PASS	AB=0.556;AC=35;AF=0.625;AN=56;BaseQRankSum=14.696;DP=634;FS=10.696;HRun=0;HaplotypeScore=202.3642;InbreedingCoeff=0.9235;MQ=72.64;MQ0=0;MQRankSum=-17.716;QD=65.21;ReadPosRankSum=6.044;VQSLOD=4.6633;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:30:90.31:0,90,2802	1/1:1,13:14:42.13:930,42,0	0/0:29,0:29:87.28:0,87,2491	0/0:18,0:18:48.12:0,48,1254	1/1:0,26:26:75.24:1727,75,0	0/0:34,0:34:99:0,102,3180	0/0:19,0:19:54.19:0,54,1679	0/0:36,0:36:99:0,108,3249	1/1:1,21:22:63.20:1420,63,0	1/1:2,23:25:75.25:1704,75,0	1/1:2,22:24:48.15:1071,48,0	1/1:0,19:19:57.20:1325,57,0	1/1:2,19:21:63.22:1455,63,0	1/1:0,20:20:57.20:1325,57,0	1/1:0,18:18:54.19:1255,54,0	1/1:1,18:19:57.20:1304,57,0	1/1:0,12:12:33.11:767,33,0	0/1:1,4:5:57.14:263,0,57	0/0:21,0:21:60.20:0,60,1892	0/0:31,0:31:93.32:0,93,3078	0/0:23,0:23:66.17:0,66,2019	1/1:0,34:34:99:2369,102,0	1/1:0,21:21:60.21:1392,60,0	1/1:0,17:17:35.37:835,35,0	0/0:29,0:29:87.30:0,87,2828	1/1:3,26:29:87.30:1972,87,0	1/1:0,30:30:90.31:2065,90,0	1/1:0,8:8:24.08:558,24,0
chr10	12386045	.	TA	T	11426.36	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=14.819;DP=645;FS=10.100;HRun=6;HaplotypeScore=207.1154;InbreedingCoeff=0.9986;MQ=62.19;MQ0=0;MQRankSum=-14.252;QD=27.47;ReadPosRankSum=1.598;VQSLOD=2.1518;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:84.08:0,84,1042	1/1:1,11:12:30.07:318,30,0	0/0:20,0:20:47.96:0,48,605	0/0:9,0:9:21.06:0,21,256	1/1:2,26:28:69.09:736,69,0	0/0:39,0:38:99:0,102,1340	0/0:16,0:16:45.14:0,45,577	0/0:31,0:31:90.28:0,90,1156	1/1:5,26:31:72.18:772,72,0	1/1:2,25:27:75.19:805,75,0	1/1:1,21:22:60.15:644,60,0	1/1:1,23:24:66.16:707,66,0	1/1:2,25:27:75.19:803,75,0	1/1:2,20:22:60.14:636,60,0	1/1:2,15:17:42.10:449,42,0	1/1:3,19:22:57.14:609,57,0	1/1:1,15:16:39.10:417,39,0	1/1:3,6:9:21.49:214,21,0	0/0:17,0:16:39.11:0,39,498	0/0:29,0:29:84.27:0,84,1105	0/0:19,0:19:57.17:0,57,736	1/1:5,32:37:93.22:990,93,0	1/1:1,31:32:84.21:900,84,0	1/1:4,12:16:27.06:285,27,0	0/0:20,0:20:54.18:0,54,711	1/1:1,27:28:81.18:860,81,0	1/1:4,30:34:84.20:896,84,0	1/1:0,12:12:36.09:385,36,0
chr10	12386126	.	A	AG	1220.36	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-7.445;DP=660;FS=1.413;HRun=0;HaplotypeScore=96.8179;InbreedingCoeff=0.9973;MQ=77.59;MQ0=1;MQRankSum=0.616;QD=34.87;ReadPosRankSum=-1.658;VQSLOD=2.6860;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:78.25:0,78,1056	0/0:10,0:10:30.10:0,30,419	0/0:24,0:24:55.06:0,55,778	0/0:27,0:26:34.45:0,34,647	0/0:27,0:27:78.24:0,78,1071	1/1:0,21:21:51.17:815,51,0	1/1:1,13:14:33.11:527,33,0	0/0:34,0:34:99:0,99,1349	0/0:31,0:31:81.25:0,81,1098	0/0:32,0:32:96.32:0,96,1339	0/0:19,0:19:57.17:0,57,778	0/0:15,0:15:39.13:0,39,545	0/0:28,0:28:84.26:0,84,1154	0/0:25,0:25:72.23:0,72,986	0/0:15,0:15:39.13:0,39,544	0/0:24,0:24:63.19:0,63,862	0/0:24,0:24:63.21:0,63,855	0/0:12,0:12:36.05:0,36,474	0/0:19,0:19:57.16:0,57,750	0/0:30,0:30:90.30:0,90,1256	0/0:24,0:24:66.20:0,66,902	0/0:28,0:28:84.27:0,84,1140	0/0:34,0:34:99:0,99,1333	0/0:23,0:23:54:0,54,735	0/0:21,0:21:54.17:0,54,731	0/0:26,0:26:78.25:0,78,1074	0/0:39,0:39:99:0,102,1382	0/0:7,0:7:21.07:0,21,293
chr10	12386727	.	T	TA	26704.35	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-13.325;DP=781;FS=0.369;HRun=1;HaplotypeScore=65.4067;InbreedingCoeff=0.9994;MQ=77.65;MQ0=0;MQRankSum=-5.694;QD=40.34;ReadPosRankSum=3.154;VQSLOD=5.4888;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,135,1735	1/1:1,19:20:51.17:764,51,0	0/0:23,0:23:63.18:0,63,784	0/0:23,0:23:66.20:0,66,833	1/1:0,30:30:87.29:1303,87,0	1/1:1,22:23:54.18:809,54,0	1/1:2,21:23:51.17:764,51,0	1/1:1,48:49:99:2051,141,0	1/1:2,35:37:96.32:1421,96,0	1/1:2,36:38:99:1505,102,0	1/1:0,22:22:63.17:919,63,0	1/1:1,24:25:69.23:1034,69,0	1/1:0,33:33:96.33:1437,96,0	1/1:0,32:33:93.31:1385,93,0	1/1:2,30:32:81.27:1214,81,0	1/1:3,25:28:69.23:1034,69,0	1/1:0,27:27:69.23:1033,69,0	1/1:1,23:24:63.21:944,63,0	1/1:3,23:27:78.26:1159,78,0	1/1:0,27:27:81.23:1189,81,0	1/1:0,39:39:99:1573,105,0	1/1:0,23:24:69.19:1000,69,0	1/1:1,24:25:63.21:944,63,0	1/1:0,19:19:54.18:808,54,0	0/0:27,0:27:78.24:0,78,997	1/1:0,26:26:78.26:1168,78,0	1/1:2,20:22:60.20:888,60,0	1/1:0,8:8:24.08:360,24,0
chr10	12387830	.	C	CAA	3702.75	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-5.679;DP=605;FS=2.956;HRun=9;HaplotypeScore=83.0457;InbreedingCoeff=0.9960;MQ=81.45;MQ0=0;MQRankSum=-0.254;QD=24.52;ReadPosRankSum=-1.519;VQSLOD=3.1740;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:25:62.74:0,63,629	0/0:13,0:13:33.06:0,33,343	0/0:20,0:20:29.76:0,30,308	0/0:18,0:17:22.83:0,23,322	0/0:20,0:20:30.22:0,30,526	1/1:5,2:31:50.97:503,51,0	1/1:5,0:16:30.05:303,30,0	1/1:12,15:29:47.79:648,48,0	0/0:26,0:27:62.83:0,63,641	0/0:34,0:34:66.51:0,67,911	0/0:21,0:21:48.03:0,48,490	0/0:15,0:15:39.06:0,39,399	0/0:23,0:23:60.11:0,60,629	0/0:16,0:16:33.06:0,33,351	0/0:14,0:14:39.07:0,39,406	0/0:12,0:12:33.08:0,33,351	0/0:17,0:17:39.06:0,39,415	0/0:21,0:21:60.13:0,60,630	1/1:5,12:17:36.37:493,36,0	1/1:6,31:39:91:1239,91,0	1/1:3,15:19:35.61:517,36,0	0/0:23,0:23:54.10:0,54,574	0/0:31,0:32:75.07:0,75,825	0/0:20,0:20:57.14:0,57,607	0/0:29,0:29:81.18:0,81,853	0/0:17,0:17:48.10:0,48,510	0/0:26,0:26:72.16:0,72,757	0/0:11,0:11:15.47:0,15,263
chr10	12388623	.	G	GT	16744.51	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-5.881;DP=623;FS=5.222;HRun=6;HaplotypeScore=63.9762;InbreedingCoeff=0.9972;MQ=75.13;MQ0=0;MQRankSum=-3.617;QD=30.95;ReadPosRankSum=3.466;VQSLOD=5.5698;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:75.17:0,75,763	1/1:1,11:12:21.07:264,21,0	0/0:19,0:19:36.06:0,36,364	0/0:11,0:10:23.99:0,24,226	1/1:2,31:33:90.29:1132,90,0	1/1:1,25:26:66.21:830,66,0	1/1:2,16:18:42.13:528,42,0	1/1:6,23:29:69.22:868,69,0	1/1:2,14:16:30.10:377,30,0	1/1:2,26:28:78.25:982,78,0	1/1:3,25:28:72.19:888,72,0	1/1:0,11:11:27.09:340,27,0	1/1:1,18:19:48.15:604,48,0	1/1:5,20:25:57.18:717,57,0	1/1:4,17:21:48.15:604,48,0	1/1:2,21:24:57.18:717,57,0	1/1:1,18:19:54.17:679,54,0	1/1:0,16:16:45.14:566,45,0	1/1:9,21:30:35.60:762,36,0	1/1:0,35:35:99:1248,102,0	1/1:2,12:14:24.08:302,24,0	1/1:1,23:24:60.19:755,60,0	1/1:2,19:21:57.18:714,57,0	1/1:0,14:14:42.13:528,42,0	0/0:25,0:25:72.15:0,72,727	1/1:2,25:27:75.24:942,75,0	1/1:7,27:34:66.21:830,66,0	1/1:1,16:17:45.14:566,45,0
chr10	12391795	.	A	AG	2191.53	PASS	AB=0.773;AC=18;AF=0.321;AN=56;BaseQRankSum=5.859;DP=560;FS=7.521;HRun=0;HaplotypeScore=54.2432;InbreedingCoeff=-0.4861;MQ=56.20;MQ0=20;MQRankSum=-11.527;QD=5.27;ReadPosRankSum=-4.306;VQSLOD=1.1523;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:30.10:0,30,419	0/0:2,0:2:6.02:0,6,84	0/0:15,0:13:39.09:0,39,474	0/0:14,0:13:38.46:0,38,459	0/0:18,0:18:30.15:0,30,590	0/1:21,14:31:99:222,0,731	0/1:15,1:16:2.42:2,0,542	0/1:26,20:30:77.32:77,0,812	0/1:19,8:24:32.11:32,0,732	0/1:14,9:21:99:250,0,446	0/0:13,4:14:6.54:0,7,478	0/1:13,1:13:58.49:58,0,368	0/0:16,3:18:3.23:0,3,623	0/0:16,2:16:45.15:0,45,629	0/1:13,4:16:53.46:53,0,461	0/1:13,3:16:5.52:6,0,503	0/1:15,6:21:99:178,0,569	0/1:10,7:15:99:141,0,357	0/1:14,13:23:99:365,0,398	0/1:10,7:14:99:143,0,321	0/1:17,6:23:99:171,0,613	0/0:14,0:14:6.15:0,6,468	0/1:12,3:15:45.31:45,0,422	0/1:16,8:22:99:178,0,566	0/0:17,0:17:51.17:0,51,713	0/1:22,8:28:99:136,0,826	0/1:23,8:29:99:131,0,721	0/1:9,7:13:99:155,0,278
chr10	12392649	.	ACACACACG	A	688.10	PASS	AB=0.970;AC=12;AF=0.231;AN=52;BaseQRankSum=-1.168;DP=420;FS=17.073;HRun=0;HaplotypeScore=106.3567;InbreedingCoeff=-0.0070;MQ=38.18;MQ0=31;MQRankSum=-2.115;QD=3.55;ReadPosRankSum=-1.437;VQSLOD=0.6958;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:9:0,9,142	0/0:6,0:5:5.90:0,6,188	./.	./.	0/0:16,1:16:3.01:0,3,88	0/1:12,0:10:0.64:1,0,44	0/0:23,0:17:23.51:0,24,151	0/1:28,0:19:99:153,0,188	0/0:18,0:17:3.49:0,3,515	0/0:20,1:16:20.31:0,20,559	0/0:6,2:6:5.98:0,6,164	0/0:8,0:7:2.21:0,2,80	0/0:7,0:7:8.93:0,9,181	0/0:11,0:10:11.72:0,12,320	0/0:11,0:9:9.01:0,9,203	0/0:9,0:8:14.67:0,15,373	0/0:30,1:26:5.36:0,5,875	0/1:11,1:8:21.44:21,0,114	0/1:18,0:16:99:347,0,157	1/1:17,0:15:3.01:50,3,0	1/1:37,0:30:1.48:16,1,0	0/0:6,0:6:0:0,0,0	0/0:5,0:5:9.03:0,9,264	0/1:25,0:22:0:0,0,527	0/0:11,0:11:0:0,0,0	0/1:12,0:9:15.73:16,0,246	0/1:15,1:13:4.72:5,0,321	0/1:14,2:14:99:202,0,645
chr10	12392656	.	CGGAGAGAGAG	C	1181.71	PASS	AB=0.937;AC=26;AF=0.542;AN=48;BaseQRankSum=2.022;DP=394;FS=37.047;HRun=0;HaplotypeScore=103.7768;InbreedingCoeff=-0.2443;MQ=38.21;MQ0=30;MQRankSum=0.650;QD=3.80;ReadPosRankSum=0.360;VQSLOD=0.2719;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	0/0:4,0:5:9.46:0,9,143	./.	./.	1/1:19,0:17:2.37:8,2,0	0/1:11,0:10:5.76:6,0,32	0/0:24,0:17:19.60:0,20,93	1/1:25,0:16:47.60:334,48,0	0/1:12,0:13:35.38:35,0,153	0/1:19,0:14:24.02:24,0,442	1/1:8,0:6:2.92:19,3,0	0/1:4,0:8:46.27:69,0,46	0/1:5,0:5:27.25:27,0,134	0/1:10,0:9:15.30:15,0,94	0/1:11,0:9:0.04:0,0,246	0/1:9,0:8:7.13:46,0,7	0/1:29,0:26:99:130,0,336	0/1:11,0:6:2.06:66,0,2	1/1:2,0:15:14.04:259,14,0	./.	1/1:36,0:30:2.64:19,3,0	0/0:5,0:5:3.01:0,3,36	1/1:4,0:5:3.18:26,3,0	0/1:23,0:22:58.53:59,0,113	0/0:0,0:11:0:0,0,0	0/1:9,0:8:61.61:62,0,76	0/1:20,0:17:19.11:19,0,451	0/1:14,0:13:95.07:97,0,95
chr10	12393828	.	T	TG	6219.79	PASS	AB=0.876;AC=23;AF=0.411;AN=56;BaseQRankSum=23.088;DP=1026;FS=23.262;HRun=4;HaplotypeScore=231.9874;InbreedingCoeff=-0.6885;MQ=59.77;MQ0=1;MQRankSum=-19.043;QD=7.02;ReadPosRankSum=-1.530;VQSLOD=-0.3598;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,105,1182	0/1:6,3:9:15.95:151,0,16	0/0:22,0:20:33.98:0,34,511	0/0:21,0:21:50.62:0,51,534	0/1:48,6:52:18.37:18,0,1063	0/1:46,11:57:99:541,0,837	0/1:25,9:33:99:179,0,522	0/0:39,2:38:21.52:0,22,884	0/1:33,4:37:99:410,0,445	0/1:39,10:48:99:590,0,554	0/1:35,4:38:99:104,0,748	0/1:28,5:33:99:462,0,343	0/1:29,4:33:99:349,0,386	0/1:37,5:42:99:388,0,606	0/1:36,7:43:99:355,0,576	0/1:32,5:37:99:303,0,630	0/1:30,5:35:99:140,0,660	0/1:17,5:22:99:106,0,426	0/1:25,5:29:99:227,0,423	0/1:35,1:36:43.41:43,0,726	0/1:49,3:52:8.93:9,0,886	0/1:39,5:44:99:273,0,768	0/1:32,2:34:99:144,0,627	0/1:19,6:25:99:124,0,347	0/0:19,0:19:28.35:0,28,572	0/1:43,9:50:99:451,0,753	0/1:59,11:68:99:759,0,792	0/1:19,0:19:92.52:93,0,326
chr10	12393832	.	G	GC	7554.36	PASS	AB=0.805;AC=23;AF=0.411;AN=56;BaseQRankSum=23.244;DP=1023;FS=28.764;HRun=0;HaplotypeScore=225.5026;InbreedingCoeff=-0.6762;MQ=58.75;MQ0=3;MQRankSum=-19.344;QD=8.59;ReadPosRankSum=-0.925;VQSLOD=3.3615;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,108,1473	0/1:5,4:9:47.55:164,0,48	0/0:23,0:18:30.24:0,30,629	0/0:21,0:20:55.10:0,55,665	0/1:44,8:50:7.51:8,0,1380	0/1:45,11:56:99:587,0,1083	0/1:30,5:34:99:102,0,678	0/0:36,3:35:10.54:0,11,1137	0/1:22,15:37:99:599,0,571	0/1:32,17:48:99:713,0,736	0/1:32,5:37:99:169,0,955	0/1:23,14:37:99:601,0,436	0/1:21,10:32:99:399,0,528	0/1:28,13:41:99:476,0,810	0/1:28,13:41:99:447,0,756	0/1:28,10:38:99:337,0,789	0/1:31,4:35:99:117,0,868	0/1:24,0:24:18.66:19,0,569	0/1:22,6:27:99:267,0,563	0/1:27,5:32:76.26:76,0,929	0/1:44,7:51:3.15:3,0,1208	0/1:32,11:43:99:398,0,968	0/1:27,8:35:99:237,0,784	0/1:20,6:26:99:103,0,449	0/0:20,0:20:45.98:0,46,725	0/1:38,15:51:99:535,0,975	0/1:44,25:67:99:975,0,1034	0/1:12,7:19:99:221,0,407
chr10	12393877	.	TA	T	5165.80	PASS	AB=0.782;AC=21;AF=0.375;AN=56;BaseQRankSum=15.124;DP=1224;FS=60.564;HRun=5;HaplotypeScore=286.8080;InbreedingCoeff=-0.6002;MQ=54.18;MQ0=3;MQRankSum=-14.874;QD=5.12;ReadPosRankSum=-0.142;VQSLOD=-0.5861;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,126,1680	0/0:12,3:14:27.09:0,27,369	0/0:26,0:21:60.14:0,60,766	0/0:23,0:21:63.21:0,63,843	0/0:45,8:53:33.49:0,33,1605	0/1:48,15:63:99:299,0,1414	0/1:28,8:34:54.62:55,0,854	0/1:50,11:54:99:154,0,1467	0/1:27,25:50:99:449,0,727	0/1:48,19:66:99:465,0,1472	0/1:25,7:32:54.74:55,0,841	0/1:33,12:44:99:195,0,1002	0/1:21,14:35:99:244,0,615	0/1:34,10:44:99:147,0,1017	0/1:40,10:50:99:146,0,1268	0/1:41,14:55:99:171,0,1289	0/1:38,8:46:99:164,0,1204	0/1:28,8:37:99:187,0,887	0/1:38,7:42:61.71:62,0,1149	0/1:36,11:47:99:204,0,1286	0/1:52,14:65:99:205,0,1659	0/0:35,4:38:28.32:0,28,1127	0/1:27,15:42:99:327,0,895	0/1:17,8:25:99:146,0,477	0/0:15,0:15:42.14:0,42,575	0/1:38,24:60:99:582,0,1154	0/1:47,31:77:99:637,0,1442	0/1:8,12:20:99:272,0,266
chr10	12394338	.	A	AAAG	5212.58	PASS	AB=0.808;AC=12;AF=0.214;AN=56;BaseQRankSum=15.096;DP=758;FS=93.189;HRun=0;HaplotypeScore=139.0461;InbreedingCoeff=-0.2730;MQ=59.51;MQ0=1;MQRankSum=-14.984;QD=12.32;ReadPosRankSum=-4.624;VQSLOD=0.0657;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:87.26:0,87,1501	0/1:13,3:16:99:225,0,473	0/0:17,0:16:42.14:0,42,715	0/0:11,0:10:27.09:0,27,429	0/1:29,28:56:99:889,0,1144	0/0:31,1:32:22.64:0,23,1458	0/1:12,0:12:37.60:38,0,464	0/0:36,0:35:99:0,105,1802	0/0:19,0:19:57.20:0,57,1006	0/1:31,15:45:99:722,0,1412	0/1:31,15:46:99:626,0,1361	0/0:16,0:16:45.15:0,45,794	0/0:14,0:14:42.14:0,42,715	0/0:14,0:14:36.12:0,36,634	0/0:22,0:22:66.22:0,66,1139	0/0:19,0:18:51.17:0,51,892	0/1:32,2:34:99:162,0,1397	0/1:27,0:28:27.36:27,0,1159	0/0:26,0:25:69.22:0,69,1166	0/1:32,17:48:99:509,0,1288	0/0:18,1:19:54.16:0,54,921	0/1:17,15:32:99:634,0,668	0/1:19,22:39:99:900,0,707	0/0:14,0:14:42.14:0,42,733	0/0:14,0:14:39.13:0,39,688	0/1:23,5:29:99:223,0,980	0/0:31,2:33:25.72:0,26,1561	0/1:28,5:33:99:257,0,1292
chr10	12395652	.	GA	G	14550.48	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=4.508;DP=527;FS=2.662;HRun=2;HaplotypeScore=72.1786;InbreedingCoeff=0.9895;MQ=73.91;MQ0=3;MQRankSum=-3.425;QD=33.68;ReadPosRankSum=5.065;VQSLOD=5.0879;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,102,1473	1/1:1,6:7:18.06:233,18,0	0/0:21,0:19:56.98:0,57,706	0/0:18,0:18:50.66:0,51,584	1/1:0,25:25:72.19:915,72,0	1/1:1,18:19:48.16:622,48,0	1/1:1,18:19:36.12:466,36,0	1/1:2,14:16:24.42:467,24,0	1/1:0,18:18:48.16:623,48,0	1/1:1,12:13:36.12:467,36,0	1/1:2,23:25:63.19:801,63,0	1/1:0,10:10:30.10:389,30,0	1/1:0,9:9:24.08:311,24,0	1/1:0,19:19:51.17:661,51,0	1/1:0,24:24:69.22:895,69,0	1/1:0,20:20:54.18:700,54,0	1/1:1,30:30:75.24:973,75,0	1/1:2,7:9:18.02:233,18,0	1/1:1,10:9:27.03:320,27,0	1/1:0,27:27:75.12:916,75,0	1/1:1,34:34:96.29:1228,96,0	1/1:0,19:19:45.15:584,45,0	1/1:0,12:11:33.11:428,33,0	1/1:0,19:19:51.17:661,51,0	0/0:21,0:21:60.20:0,60,894	1/1:0,21:21:63.19:802,63,0	1/1:0,18:18:51.17:661,51,0	1/1:0,6:6:15.05:195,15,0
chr10	12395774	.	C	CA	10204.94	PASS	AB=0.778;AC=48;AF=0.857;AN=56;BaseQRankSum=-5.729;DP=473;FS=15.672;HRun=7;HaplotypeScore=49.5601;InbreedingCoeff=0.7271;MQ=70.64;MQ0=0;MQRankSum=0.644;QD=25.77;ReadPosRankSum=2.830;VQSLOD=3.7413;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:75.12:0,75,724	1/1:2,7:9:21.06:254,21,0	0/0:11,0:11:29.04:0,29,255	0/1:15,0:15:6.99:7,0,197	1/1:3,31:34:58.21:953,58,0	1/1:1,12:13:27.08:326,27,0	0/1:1,4:5:13.76:130,0,14	1/1:14,0:14:40.24:221,40,0	1/1:4,12:16:33.10:399,33,0	1/1:1,19:20:57.15:675,57,0	1/1:1,19:20:57.17:685,57,0	1/1:3,10:13:27.01:298,27,0	1/1:2,10:12:24.07:290,24,0	1/1:2,12:14:30.09:362,30,0	1/1:1,19:20:48.15:580,48,0	1/1:2,10:12:30.09:362,30,0	1/1:1,15:16:45.14:544,45,0	1/1:1,12:13:25.06:323,25,0	1/1:17,0:17:34.53:186,35,0	1/1:32,0:32:37.25:385,37,0	1/1:6,0:6:14.57:83,15,0	1/1:1,8:9:24.07:290,24,0	1/1:0,25:25:69.21:834,69,0	1/1:1,7:8:21.06:254,21,0	0/0:40,0:40:99:0,105,1009	1/1:0,28:28:84.25:1004,84,0	1/1:1,18:19:51.16:616,51,0	1/1:0,6:6:12.04:145,12,0
chr10	12395781	.	A	AT	4865.97	PASS	AB=1.000;AC=42;AF=0.750;AN=56;BaseQRankSum=7.778;DP=470;FS=5.045;HRun=2;HaplotypeScore=66.3210;InbreedingCoeff=0.3763;MQ=68.25;MQ0=4;MQRankSum=-2.851;QD=12.91;ReadPosRankSum=4.803;VQSLOD=3.8493;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:81.13:0,81,951	0/1:8,0:8:4.94:55,0,5	0/0:11,0:10:26.91:0,27,302	0/0:15,0:13:8.39:0,8,219	0/1:34,0:34:46.13:213,0,46	1/1:11,0:11:9.59:72,10,0	0/1:8,0:6:9.37:21,0,9	1/1:1,17:17:51.13:662,51,0	0/1:13,0:13:15.50:82,0,15	0/1:22,0:21:31.72:105,0,32	1/1:20,0:20:29.16:184,29,0	1/1:12,0:12:8.69:69,9,0	1/1:11,0:11:20.94:88,21,0	0/1:14,0:14:12.91:70,0,13	1/1:19,0:19:42.08:180,42,0	1/1:11,0:11:2.09:86,2,0	1/1:16,0:16:40.49:182,40,0	1/1:13,0:13:5.14:86,5,0	1/1:2,13:15:39.12:530,39,0	1/1:2,29:31:87.19:1172,87,0	1/1:2,5:7:21.04:258,21,0	1/1:8,0:8:20.26:78,20,0	1/1:26,0:26:35.88:208,36,0	1/1:7,0:7:18.65:79,19,0	0/0:37,0:37:99:0,111,1324	1/1:30,0:30:18.85:199,19,0	1/1:19,0:19:20.74:152,21,0	1/1:4,0:4:9.98:37,10,0
chr10	12399119	.	T	TAA	3028.90	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-9.680;DP=581;FS=2.818;HRun=8;HaplotypeScore=64.7232;InbreedingCoeff=0.9973;MQ=57.05;MQ0=1;MQRankSum=0.757;QD=29.70;ReadPosRankSum=-2.113;VQSLOD=3.3803;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:54.11:0,54,602	0/0:9,0:9:27.05:0,27,291	0/0:12,0:9:21.02:0,21,233	0/0:15,0:13:33.04:0,33,354	0/0:36,0:36:96.20:0,96,1052	0/0:21,0:21:51.12:0,51,569	0/0:13,0:13:36.08:0,36,390	1/1:18,22:40:70.62:949,71,0	0/0:21,0:21:60.15:0,60,660	0/0:34,0:34:96.26:0,96,1070	0/0:37,0:37:96.24:0,96,1061	0/0:13,0:13:33.05:0,33,359	0/0:17,0:17:48.11:0,48,524	0/0:14,0:14:42.11:0,42,468	0/0:23,0:22:66.18:0,66,736	0/0:14,0:14:39.10:0,39,435	0/0:22,0:22:50.30:0,50,512	0/0:16,0:16:33.08:0,33,367	1/1:7,13:18:39.13:619,39,0	1/1:4,26:29:77.75:1192,78,0	1/1:2,9:11:27.09:429,27,0	0/0:17,0:17:36.09:0,36,401	0/0:29,0:29:69.18:0,69,768	0/0:9,0:9:24.06:0,24,266	0/0:12,0:12:36.09:0,36,393	0/0:24,0:24:54.12:0,54,602	0/0:30,0:30:84.23:0,84,936	0/0:18,0:18:48.08:0,48,521
chr10	12399674	.	TA	T	10232.88	PASS	AB=0.665;AC=18;AF=0.321;AN=56;BaseQRankSum=-9.042;DP=970;FS=15.640;HRun=5;HaplotypeScore=210.3027;InbreedingCoeff=-0.4752;MQ=51.87;MQ0=3;MQRankSum=11.121;QD=15.23;ReadPosRankSum=3.736;VQSLOD=2.6373;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:69.17:0,69,906	0/1:7,7:12:49.49:242,0,49	0/0:17,0:8:15.05:0,15,194	0/0:19,0:13:20.41:0,20,351	0/1:31,35:65:99:1135,0,429	0/0:25,0:24:54.18:0,54,728	0/0:27,0:26:57.15:0,57,752	0/0:56,0:53:99:0,135,1767	0/1:18,18:34:99:530,0,299	0/1:31,24:55:99:765,0,683	0/1:19,22:41:99:701,0,325	0/1:8,13:21:99:382,0,205	0/1:9,19:28:68.11:580,0,68	0/1:15,15:30:99:492,0,277	0/1:14,10:23:99:313,0,252	0/1:12,11:23:99:347,0,258	0/1:33,10:42:99:229,0,875	0/1:15,13:28:99:367,0,397	0/0:39,0:36:93.18:0,93,1159	0/0:51,0:48:99:0,102,1313	0/0:26,0:26:63.07:0,63,805	0/1:21,27:48:99:823,0,341	0/1:19,29:46:99:877,0,173	0/1:4,13:17:99:298,0,115	0/0:13,0:13:36.12:0,36,492	0/1:23,28:51:99:925,0,314	0/1:28,19:46:99:590,0,650	0/1:29,23:52:99:635,0,865
chr10	12399884	.	C	CT	6740.76	PASS	AB=0.780;AC=23;AF=0.411;AN=56;BaseQRankSum=20.556;DP=926;FS=52.310;HRun=1;HaplotypeScore=159.3863;InbreedingCoeff=-0.7220;MQ=54.63;MQ0=4;MQRankSum=-15.135;QD=8.48;ReadPosRankSum=-0.178;VQSLOD=-0.1033;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:76.48:0,76,1241	0/1:7,9:16:99:356,0,224	0/0:31,0:18:45.14:0,45,579	0/0:24,0:19:51.16:0,51,649	0/1:24,20:44:99:603,0,711	0/1:25,8:33:99:230,0,717	0/1:19,7:26:99:175,0,592	0/1:43,7:50:99:170,0,1440	0/1:33,15:48:99:482,0,1026	0/1:27,11:38:99:328,0,749	0/1:31,20:51:99:495,0,1035	0/1:15,9:24:99:293,0,478	0/1:22,10:32:99:295,0,656	0/1:19,7:26:99:239,0,626	0/1:19,11:30:99:320,0,641	0/1:13,7:20:99:212,0,435	0/1:30,7:37:99:159,0,961	0/1:22,4:27:99:120,0,711	0/1:24,4:27:99:149,0,704	0/1:26,15:39:99:386,0,849	0/1:26,3:29:53.56:54,0,854	0/1:21,14:34:99:397,0,720	0/1:25,11:36:99:327,0,746	0/0:14,1:15:0.35:0,0,500	0/0:22,0:22:60.16:0,60,749	0/1:37,15:52:99:397,0,1207	0/1:28,13:41:99:466,0,894	0/1:27,4:31:86.34:86,0,925
chr10	12399960	.	GACAGTACT	G	6819.66	PASS	AB=0.844;AC=20;AF=0.357;AN=56;BaseQRankSum=16.102;DP=860;FS=2.257;HRun=0;HaplotypeScore=255.1806;InbreedingCoeff=-0.5612;MQ=57.03;MQ0=0;MQRankSum=-15.499;QD=10.49;ReadPosRankSum=1.787;VQSLOD=3.7722;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:75.47:0,75,3249	0/1:9,2:11:99:142,0,957	0/0:22,0:19:50.75:0,51,1941	0/0:26,0:26:69.07:0,69,2671	0/1:50,15:65:99:357,0,5922	0/1:30,4:34:99:262,0,2948	0/1:13,2:15:99:127,0,1651	0/0:32,1:33:4.23:0,4,3556	0/1:33,6:39:99:266,0,3572	0/1:31,10:41:99:488,0,3826	0/1:33,18:51:99:874,0,3463	0/1:14,3:17:46.92:47,0,1511	0/1:28,3:31:88.36:88,0,2662	0/1:25,3:28:99:179,0,2995	0/1:26,3:29:7.79:8,0,3206	0/1:16,3:19:99:124,0,1612	0/0:28,0:28:75.23:0,75,3094	0/1:21,1:22:31.90:32,0,2138	0/0:25,0:25:63.18:0,63,2467	0/1:25,15:39:99:869,0,2849	0/0:27,0:27:81.22:0,81,3269	0/1:38,14:52:99:888,0,4399	0/1:32,9:42:99:491,0,3619	0/1:15,1:16:46.89:47,0,1484	0/0:17,0:17:45.14:0,45,2000	0/1:28,8:36:99:497,0,3460	0/1:24,8:32:99:346,0,2993	0/1:21,8:30:99:687,0,2452
chr10	12400044	.	C	CA	423.21	PASS	AB=0.768;AC=8;AF=0.143;AN=56;BaseQRankSum=16.205;DP=793;FS=0.365;HRun=0;HaplotypeScore=243.1509;InbreedingCoeff=-0.1841;MQ=62.01;MQ0=0;MQRankSum=-16.107;QD=1.59;ReadPosRankSum=1.013;VQSLOD=2.3144;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:95.74:0,96,793	0/0:16,3:19:14.98:0,15,362	0/0:16,0:14:41.85:0,42,426	0/0:13,0:13:32.65:0,33,277	0/0:33,13:45:1.04:0,1,650	0/0:26,3:29:35.88:0,36,534	0/0:14,2:16:8.89:0,9,295	0/1:32,7:39:31.52:32,0,738	0/0:25,4:29:15.58:0,16,577	0/1:21,11:32:93.58:94,0,490	0/0:25,9:34:8.32:0,8,579	0/0:20,3:23:12:0,12,443	0/0:27,2:29:46.03:0,46,632	0/0:22,0:22:62.52:0,63,542	0/0:28,2:30:62.58:0,63,672	0/0:24,4:28:24.90:0,25,570	0/0:28,3:31:44.79:0,45,595	0/1:10,3:13:7.60:8,0,156	0/1:20,4:23:10.85:11,0,361	0/1:28,12:40:67.10:67,0,573	0/0:23,1:25:57.01:0,57,501	0/1:33,18:51:99:141,0,670	0/1:26,18:44:99:115,0,568	0/0:18,2:20:50.93:0,51,430	0/0:18,0:18:47.98:0,48,418	0/0:24,3:27:21.03:0,21,586	0/0:31,5:36:8.66:0,9,638	0/1:12,12:24:88.38:88,0,230
chr10	12400045	.	CATTA	C	1657.55	PASS	AB=0.816;AC=17;AF=0.304;AN=56;BaseQRankSum=16.915;DP=801;FS=0.767;HRun=0;HaplotypeScore=282.2569;InbreedingCoeff=-0.4430;MQ=62.81;MQ0=0;MQRankSum=-16.520;QD=3.13;ReadPosRankSum=1.973;VQSLOD=1.8321;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,99,2418	0/1:16,3:19:14.90:15,0,1119	0/0:17,0:15:48.16:0,48,1199	0/0:13,0:13:33.11:0,33,705	0/1:33,13:45:90.42:90,0,2168	0/0:26,3:29:2:0,2,1633	0/1:14,2:16:20.90:21,0,901	0/1:35,7:42:99:108,0,2619	0/1:25,4:29:44.08:44,0,1781	0/1:22,11:33:99:237,0,1706	0/1:25,9:34:57.29:57,0,1846	0/1:20,3:23:32.85:33,0,1393	0/0:27,2:29:16.11:0,16,1859	0/0:22,0:22:63.22:0,63,1577	0/0:28,2:30:47.85:0,48,1988	0/1:24,4:28:20.01:20,0,1717	0/0:28,3:31:15.18:0,15,1809	0/1:10,3:13:35.23:35,0,547	0/1:20,4:23:6.07:6,0,1366	0/1:28,12:40:99:158,0,2073	0/0:25,1:26:69.24:0,69,1782	0/1:33,18:51:99:366,0,2276	0/1:26,18:44:99:311,0,1859	0/0:20,2:22:57.20:0,57,1468	0/0:18,0:18:48.16:0,48,1238	0/1:23,3:27:44.90:45,0,1736	0/1:31,5:36:60.56:61,0,2131	0/1:12,12:24:99:208,0,784
chr10	12400668	.	A	AG	10852.43	PASS	AB=0.713;AC=24;AF=0.429;AN=56;BaseQRankSum=20.990;DP=957;FS=2.145;HRun=0;HaplotypeScore=162.8443;InbreedingCoeff=-0.7500;MQ=69.85;MQ0=1;MQRankSum=-13.321;QD=12.84;ReadPosRankSum=0.762;VQSLOD=5.6322;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,126,1761	0/1:10,8:18:99:239,0,339	0/0:24,0:23:66.21:0,66,892	0/0:29,0:28:75.25:0,75,1049	0/1:26,10:36:99:151,0,920	0/1:16,18:34:99:712,0,554	0/1:11,12:23:99:416,0,397	0/1:39,14:53:99:512,0,1410	0/1:26,21:47:99:811,0,884	0/1:35,16:50:99:515,0,1319	0/1:16,9:25:99:182,0,530	0/1:20,10:30:99:391,0,710	0/1:18,14:32:99:439,0,667	0/1:14,11:25:99:362,0,518	0/1:16,16:32:99:624,0,561	0/1:17,13:30:99:475,0,623	0/1:24,19:43:99:559,0,846	0/1:18,10:27:99:387,0,631	0/1:18,14:31:99:532,0,551	0/1:38,19:57:99:522,0,1305	0/1:24,24:48:99:694,0,844	0/1:23,15:38:99:463,0,854	0/1:45,13:58:99:153,0,1459	0/1:13,7:20:99:140,0,494	0/0:16,0:16:45.14:0,45,615	0/1:22,13:35:99:427,0,822	0/1:18,21:38:99:890,0,599	0/1:5,6:11:99:254,0,177
chr10	12401712	.	AT	A	6513.41	PASS	AB=1.000;AC=50;AF=0.962;AN=52;BaseQRankSum=5.719;DP=553;FS=2.502;HRun=1;HaplotypeScore=80.8408;InbreedingCoeff=-0.0693;MQ=37.97;MQ0=1;MQRankSum=-4.245;QD=11.84;ReadPosRankSum=6.519;VQSLOD=3.3040;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:31,0:31:8.96:68,9,0	1/1:12,0:11:20.87:158,21,0	./.	./.	1/1:21,0:18:35.65:257,36,0	1/1:32,0:30:62.39:455,62,0	1/1:15,0:15:17.92:287,18,0	0/1:15,0:7:25.07:65,0,25	1/1:42,0:39:58.91:583,59,0	1/1:26,0:24:67.89:469,68,0	1/1:17,0:12:14.82:103,15,0	1/1:23,0:19:41.56:305,42,0	1/1:11,0:11:5.70:165,6,0	1/1:27,0:25:8.61:329,9,0	0/1:18,0:18:6.17:234,0,6	1/1:29,0:28:8.05:355,8,0	1/1:17,0:17:26.77:197,27,0	1/1:21,0:21:41.45:284,41,0	1/1:12,0:11:32.57:217,33,0	1/1:23,0:20:38.66:286,39,0	1/1:17,0:15:0.59:118,1,0	1/1:26,0:22:46.99:353,47,0	1/1:21,0:19:11.79:223,12,0	1/1:15,0:15:32.65:244,33,0	1/1:17,0:13:23.81:178,24,0	1/1:28,0:24:70.96:480,71,0	1/1:2,29:31:6.18:64,6,0	1/1:3,0:2:5.88:36,6,0
chr10	12405577	.	T	TCA	17902.39	PASS	AC=46;AF=0.852;AN=54;BaseQRankSum=-5.365;DP=551;FS=18.540;HRun=0;HaplotypeScore=64.1466;InbreedingCoeff=0.9540;MQ=57.98;MQ0=12;MQRankSum=-9.519;QD=38.92;ReadPosRankSum=2.250;VQSLOD=5.0224;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:96.28:0,96,1536	1/1:0,13:13:36.12:722,36,0	0/0:10,0:10:29.31:0,29,424	0/0:23,0:22:60.18:0,60,889	1/1:2,26:29:63.17:1202,63,0	1/1:1,21:18:39.13:775,39,0	1/1:2,13:8:24.08:487,24,0	1/1:3,4:8:21.04:324,21,0	1/1:0,18:15:33.11:662,33,0	1/1:5,27:31:81.21:1528,81,0	1/1:1,23:23:60.21:1190,60,0	1/1:0,18:16:36.12:730,36,0	1/1:3,18:18:39.09:742,39,0	1/1:0,22:21:42.13:808,42,0	1/1:1,14:11:24.08:457,24,0	1/1:0,15:10:24.08:480,24,0	1/1:0,15:14:27.09:547,27,0	1/1:0,10:10:18.06:365,18,0	1/1:4,8:5:9.03:160,9,0	1/1:2,28:27:69.24:1355,69,0	1/1:1,7:6:12.04:244,12,0	1/1:5,23:30:66.18:1271,66,0	1/1:3,26:32:78.22:1506,78,0	1/1:1,10:9:8.87:183,9,0	0/0:17,0:17:39.13:0,39,631	1/1:0,20:15:45.15:913,45,0	1/1:1,25:24:63.22:1254,63,0	./.
chr10	12406843	.	C	CT	159.18	PASS	AB=0.809;AC=3;AF=0.054;AN=56;BaseQRankSum=1.581;DP=647;FS=27.316;HRun=0;HaplotypeScore=99.9136;InbreedingCoeff=-0.0628;MQ=49.16;MQ0=69;MQRankSum=-4.395;QD=2.04;ReadPosRankSum=-1.120;VQSLOD=0.9375;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:34:83.82:0,84,1065	0/0:10,0:10:21.07:0,21,293	0/0:23,0:3:8.76:0,9,86	0/0:36,0:7:11.25:0,11,120	0/0:25,0:24:66.22:0,66,921	0/0:15,0:15:29.89:0,30,387	0/0:20,0:17:45.02:0,45,599	0/1:40,6:15:99:102,0,393	0/0:28,0:28:65.75:0,66,838	0/0:24,0:24:69.22:0,69,944	0/0:24,0:24:67.95:0,68,880	0/0:5,0:5:9.02:0,9,108	0/0:21,0:21:42.04:0,42,562	0/0:14,0:14:39.13:0,39,539	0/0:19,0:19:42.14:0,42,583	0/1:24,4:27:73.77:74,0,763	0/0:33,0:33:87.15:0,87,1127	0/0:16,0:16:39.02:0,39,498	0/0:57,0:12:27.08:0,27,360	0/0:14,0:14:36.12:0,36,501	0/0:25,0:24:66.15:0,66,858	0/0:25,0:24:63.21:0,63,877	0/0:23,0:23:66.05:0,66,889	0/0:15,0:15:39.13:0,39,538	0/0:15,0:15:45.11:0,45,607	0/0:25,0:25:72.24:0,72,1004	0/0:21,1:22:45.14:0,45,598	0/1:2,2:4:71.70:84,0,72
chr10	12407176	.	T	TG	11004.23	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-6.545;DP=444;FS=6.852;HRun=5;HaplotypeScore=44.3250;InbreedingCoeff=0.9817;MQ=54.23;MQ0=1;MQRankSum=3.349;QD=30.15;ReadPosRankSum=3.539;VQSLOD=5.1005;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:93.20:0,93,985	1/1:1,6:7:15.05:196,15,0	0/0:16,0:14:36:0,36,357	0/0:11,0:10:23.45:0,23,212	1/1:0,15:14:33.11:433,33,0	1/1:0,17:16:30.05:375,30,0	1/1:0,15:15:27.09:355,27,0	1/1:1,4:5:12.02:129,12,0	1/1:1,20:21:54.18:710,54,0	1/1:0,16:16:45.14:581,45,0	1/1:2,18:20:51.17:669,51,0	1/1:0,13:13:33.11:434,33,0	1/1:1,12:12:30.10:394,30,0	1/1:0,15:15:42.09:533,42,0	1/1:0,17:16:39.13:513,39,0	1/1:0,12:12:33.11:434,33,0	1/1:4,22:25:51.17:671,51,0	1/1:1,19:20:57.19:748,57,0	1/1:2,6:8:21.06:262,21,0	1/1:1,12:12:27.09:355,27,0	1/1:3,22:23:51.17:670,51,0	1/1:1,13:14:33.11:434,33,0	1/1:3,13:16:33.11:432,33,0	1/1:2,16:18:35.87:434,36,0	0/0:14,0:14:36.09:0,36,387	1/1:2,16:17:45.07:541,45,0	1/1:3,12:15:36.11:463,36,0	1/1:0,6:6:18.06:237,18,0
chr10	12407309	.	AAAAG	A	5273.48	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=-8.623;DP=510;FS=9.618;HRun=0;HaplotypeScore=131.7549;InbreedingCoeff=0.8606;MQ=66.88;MQ0=4;MQRankSum=-5.587;QD=41.52;ReadPosRankSum=-1.112;VQSLOD=4.8633;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,99,2537	0/0:13,0:11:16.01:0,16,48	0/0:21,0:17:47.97:0,48,1059	0/0:13,0:10:20.64:0,21,527	0/0:23,0:23:45.60:0,46,146	1/1:0,16:16:45.15:842,45,0	1/1:0,14:14:24.08:448,24,0	1/1:1,20:21:60.16:1026,60,0	0/0:17,0:17:33.12:0,33,99	0/0:25,0:24:47.53:0,48,156	0/0:18,0:18:31.08:0,31,93	0/0:21,0:21:42.18:0,42,126	0/1:12,0:12:17.93:18,0,43	0/0:14,0:14:26.64:0,27,80	0/0:17,0:17:26.46:0,26,79	0/0:7,0:7:11.10:0,11,33	0/0:17,0:17:28.86:0,29,86	0/0:13,0:13:24.24:0,24,73	1/1:0,10:10:30.09:530,30,0	1/1:3,37:40:99:1851,105,0	1/1:0,14:14:35.91:559,36,0	0/0:22,0:22:42.71:0,43,133	0/0:23,0:23:41.97:0,42,126	0/0:6,0:6:11.10:0,11,33	0/0:19,0:19:54.19:0,54,1428	0/0:27,0:27:52.02:0,52,173	0/0:23,0:22:6.80:0,7,81	0/0:9,0:9:11.10:0,11,33
chr10	12407311	.	AAG	A	13349.57	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=7.528;DP=503;FS=0.992;HRun=0;HaplotypeScore=83.7443;InbreedingCoeff=0.9839;MQ=67.27;MQ0=3;MQRankSum=-1.536;QD=32.01;ReadPosRankSum=3.927;VQSLOD=6.4002;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,99,1752	1/1:2,11:11:24.03:336,24,0	0/0:20,0:17:47.42:0,47,755	0/0:12,0:10:20.79:0,21,353	1/1:0,24:24:60.20:891,60,0	1/1:16,0:16:44.16:271,44,0	1/1:14,0:14:23.61:151,24,0	1/1:20,0:20:59.10:387,59,0	1/1:0,17:17:45.15:681,45,0	1/1:0,23:23:69.22:1024,69,0	1/1:0,18:18:45.11:655,45,0	1/1:2,19:21:57.19:862,57,0	1/1:1,11:12:36.12:515,36,0	1/1:0,14:14:36.12:545,36,0	1/1:0,16:16:36.12:544,36,0	1/1:0,7:7:15.05:227,15,0	1/1:1,16:17:39.13:590,39,0	1/1:0,13:13:33.11:499,33,0	1/1:10,0:10:29.46:186,29,0	1/1:39,0:39:83.39:585,83,0	1/1:14,0:14:29.50:187,29,0	1/1:0,22:22:60.16:873,60,0	1/1:0,22:22:56.94:861,57,0	1/1:1,5:6:15.05:227,15,0	0/0:20,0:20:57.18:0,57,1009	1/1:0,26:26:78.24:1138,78,0	1/1:0,24:24:61.72:886,62,0	1/1:3,6:9:15.05:227,15,0
chr10	12410903	.	ACACACACACACACACACACACAC	A	580.51	PASS	AB=1.000;AC=24;AF=0.632;AN=38;BaseQRankSum=-3.776;DP=340;FS=10.583;HRun=0;HaplotypeScore=83.1472;InbreedingCoeff=0.3415;MQ=32.59;MQ0=82;MQRankSum=-1.989;QD=3.38;ReadPosRankSum=0.501;VQSLOD=0.9461;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:18:21.54:0,22,1023	1/1:1,0:1:3.01:38,3,0	./.	./.	1/1:12,0:6:3.01:33,3,0	1/1:23,0:12:1.72:4,2,0	0/0:24,0:14:5.60:0,6,211	1/1:12,0:10:3.01:32,3,0	./.	0/1:14,0:10:16.53:56,0,17	./.	0/0:9,0:5:0:0,0,0	./.	0/0:3,0:2:0.47:0,0,1	./.	1/1:8,6:12:3.01:182,3,0	1/1:21,0:17:8.41:113,8,0	0/1:9,0:4:1.71:2,0,202	1/1:11,0:8:6.03:45,6,0	./.	./.	0/0:18,0:9:0:0,0,1	1/1:12,0:10:3.01:38,3,0	1/1:17,0:6:3.01:38,3,0	0/0:7,0:7:8.77:0,9,365	1/1:14,0:5:8.19:41,8,0	1/1:12,0:4:6.02:76,6,0	./.
chr10	12410925	.	AC	A	1388.37	PASS	AB=0.655;AC=37;AF=0.804;AN=46;BaseQRankSum=-0.861;DP=388;FS=5.993;HRun=2;HaplotypeScore=37.7376;InbreedingCoeff=0.2203;MQ=27.94;MQ0=114;MQRankSum=-1.745;QD=4.60;ReadPosRankSum=-2.839;VQSLOD=-0.5050;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:17:23.57:0,24,199	1/1:1,2:2:3.01:38,3,0	./.	./.	1/1:6,13:8:6.02:71,6,0	1/1:11,10:9:2.91:38,3,0	0/1:12,13:12:27.28:68,0,27	1/1:8,5:6:9.01:94,9,0	./.	0/1:7,7:5:4.03:52,0,4	0/1:3,5:5:0:0,0,0	1/1:2,9:6:6.02:77,6,0	./.	1/1:4,7:6:7.07:79,7,0	./.	1/1:11,1:9:2.60:10,3,0	1/1:8,19:22:26.38:342,26,0	0/1:4,6:3:30.33:33,0,30	1/1:2,2:1:3.01:38,3,0	1/1:4,6:6:9.03:114,9,0	0/1:13,9:10:0:1,0,0	1/1:8,14:9:3.01:39,3,0	1/1:2,8:8:3.01:38,3,0	1/1:8,12:7:3.01:38,3,0	0/0:8,0:8:14.19:0,14,144	1/1:5,11:5:9.50:115,10,0	1/1:5,12:6:15.05:190,15,0	1/1:4,3:1:3.01:38,3,0
chr10	12413301	.	CTTAGAAG	C	5084.25	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=11.224;DP=433;FS=11.311;HRun=0;HaplotypeScore=104.1929;InbreedingCoeff=0.9867;MQ=67.92;MQ0=0;MQRankSum=-7.837;QD=69.65;ReadPosRankSum=-1.557;VQSLOD=4.4085;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:75.19:0,75,2892	0/0:6,0:6:18.06:0,18,705	0/0:30,0:27:78.08:0,78,2524	0/0:24,0:19:36.42:0,36,1085	0/0:19,0:19:57.18:0,57,2190	0/0:13,0:13:39.13:0,39,1602	0/0:17,0:17:48.16:0,48,1900	1/1:1,29:30:87.27:2184,87,0	0/0:13,0:13:39.13:0,39,1625	0/0:18,0:18:54.17:0,54,2029	0/0:16,0:16:48.16:0,48,1950	0/0:7,0:7:21.06:0,21,699	0/0:18,0:18:54.17:0,54,2164	0/0:9,0:9:27.08:0,27,864	0/0:10,0:10:30.09:0,30,1085	0/0:9,0:9:27.08:0,27,959	0/0:26,0:27:74.96:0,75,2838	0/0:11,0:11:33.11:0,33,1362	1/1:0,22:22:63.20:1612,63,0	1/1:0,16:16:33.11:870,33,0	1/1:0,5:5:15.05:418,15,0	0/0:13,0:13:39.13:0,39,1458	0/0:13,0:13:39.10:0,39,1433	0/0:6,0:6:18.06:0,18,756	0/0:11,0:11:33.11:0,33,1382	0/0:26,0:26:75.25:0,75,2990	0/0:12,0:12:36.11:0,36,1397	0/0:6,0:6:18.06:0,18,755
chr10	12414145	.	CAG	C	684.97	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=5.270;DP=528;FS=2.041;HRun=0;HaplotypeScore=30.9191;InbreedingCoeff=0.6706;MQ=29.75;MQ0=127;MQRankSum=-1.198;QD=11.42;ReadPosRankSum=0.997;VQSLOD=2.7608;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:30:45.15:0,45,866	0/0:12,0:9:18.06:0,18,346	0/0:7,0:1:3.01:0,3,58	0/0:11,0:1:3.01:0,3,58	0/0:29,0:18:12.04:0,12,225	0/0:29,0:16:15.05:0,15,289	0/0:14,0:8:6.02:0,6,111	1/1:18,5:5:15.05:230,15,0	0/0:19,0:13:8.79:0,9,173	0/0:15,0:11:33.11:0,33,614	0/0:24,0:15:12.04:0,12,231	0/0:15,0:9:9.03:0,9,174	0/0:20,0:15:8.95:0,9,133	0/0:15,0:13:12.04:0,12,231	0/0:13,0:6:6.02:0,6,116	0/0:16,0:8:9.03:0,9,173	0/0:36,0:25:12.04:0,12,228	0/0:13,0:9:11.92:0,12,231	1/1:6,5:2:6.02:92,6,0	1/1:2,14:14:30.10:457,30,0	1/1:8,2:1:3.01:46,3,0	0/0:28,0:15:18.06:0,18,346	0/0:18,0:9:21.07:0,21,403	0/0:16,0:11:9.03:0,9,173	0/0:16,0:15:36.12:0,36,687	0/0:23,0:15:45.15:0,45,868	0/0:26,0:19:42.14:0,42,806	0/0:13,0:9:15.05:0,15,265
chr10	12415519	.	AC	A	678.46	PASS	AB=0.556;AC=7;AF=0.135;AN=52;BaseQRankSum=2.703;DP=649;FS=6.506;HRun=1;HaplotypeScore=36.3637;InbreedingCoeff=0.8018;MQ=30.49;MQ0=185;MQRankSum=-1.117;QD=10.77;ReadPosRankSum=-1.182;VQSLOD=0.8276;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:21:30.02:0,30,446	0/0:9,0:6:15.05:0,15,237	./.	./.	0/0:20,0:13:15.05:0,15,226	0/0:40,0:32:63.20:0,63,960	0/0:27,0:11:24.07:0,24,336	1/1:15,10:7:18.06:247,18,0	0/0:26,0:22:42.10:0,42,627	0/0:99,0:11:33.10:0,33,505	0/0:19,0:15:21.06:0,21,311	0/0:12,0:10:27.09:0,27,429	0/0:16,0:14:30.10:0,30,476	0/0:17,0:17:33.11:0,33,520	0/0:17,0:15:36.12:0,36,571	0/0:16,0:15:45.15:0,45,715	0/0:37,0:25:27.01:0,27,399	0/0:14,0:9:15.05:0,15,236	1/1:4,5:5:12.04:167,12,0	1/1:4,15:16:21.07:292,21,0	0/1:2,8:8:35.55:113,0,36	0/0:28,0:19:27.09:0,27,429	0/0:23,0:15:33.06:0,33,495	0/0:29,0:22:21.07:0,21,333	0/0:21,0:17:33.10:0,33,503	0/0:26,0:13:33.09:0,33,482	0/0:29,0:22:54.14:0,54,821	0/0:25,0:12:24.05:0,24,337
chr10	12416083	.	AT	A	467.06	PASS	AC=20;AF=1.000;AN=20;DP=53;FS=0.000;HRun=2;HaplotypeScore=27.5943;InbreedingCoeff=-0.1048;MQ=22.22;MQ0=11;QD=11.68;VQSLOD=1.6047;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	1/1:0,1:1:2.99:23,3,0	./.	./.	1/1:0,6:5:11.94:92,12,0	1/1:0,1:1:2.99:24,3,0	./.	./.	./.	1/1:0,1:1:2.98:22,3,0	1/1:1,4:3:5.99:48,6,0	./.	./.	./.	./.	./.	./.	./.	./.	1/1:2,8:7:11.97:95,12,0	./.	1/1:0,2:2:5.99:48,6,0	1/1:1,3:2:3:25,3,0	./.	1/1:0,8:7:14.97:119,15,0	1/1:0,2:2:5.96:43,6,0	./.	./.
chr10	12416109	.	AT	A	190.87	PASS	AB=0.529;AC=13;AF=0.813;AN=16;BaseQRankSum=-0.594;DP=42;FS=0.000;HRun=2;HaplotypeScore=27.6105;MQ=20.38;MQ0=13;MQRankSum=0.425;QD=6.58;ReadPosRankSum=2.123;VQSLOD=0.7923;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	1/1:0,1:1:2.98:21,3,0	./.	./.	1/1:0,6:5:11.94:88,12,0	./.	./.	./.	./.	./.	1/1:1,2:2:2.98:22,3,0	./.	./.	./.	./.	./.	./.	./.	./.	1/1:1,6:4:2.98:22,3,0	./.	1/1:0,2:2:5.97:44,6,0	0/0:1,1:1:2.97:0,3,20	./.	0/1:1,8:7:8.01:54,0,8	1/1:0,1:1:2.98:22,3,0	./.	./.
chr10	12425501	.	C	CAGAA	616.19	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-2.503;DP=574;FS=1.220;HRun=0;HaplotypeScore=102.0851;InbreedingCoeff=0.8767;MQ=56.47;MQ0=0;MQRankSum=-0.685;QD=15.80;ReadPosRankSum=0.379;VQSLOD=3.0007;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:25:51.53:0,52,793	0/0:6,0:6:12.04:0,12,201	0/0:26,0:24:41.11:0,41,605	0/0:23,0:20:19.39:0,19,231	0/0:23,0:23:50.93:0,51,717	1/1:8,20:26:18.06:446,18,0	1/1:1,9:8:12.04:284,12,0	0/0:16,0:16:38.13:0,38,526	0/0:24,0:24:35.54:0,36,573	0/0:24,0:24:57.11:0,57,903	0/0:20,0:20:36.05:0,36,567	0/0:13,0:13:14.91:0,15,252	0/0:13,0:13:24.02:0,24,403	0/0:15,0:15:21.06:0,21,318	0/0:20,0:20:15.05:0,15,245	0/0:14,0:14:29.92:0,30,474	0/0:20,0:19:50.93:0,51,762	0/0:24,0:24:54.16:0,54,855	0/0:13,0:13:24.89:0,25,274	0/0:23,0:21:24.03:0,24,295	0/0:14,0:13:0:0,0,0	0/0:20,0:20:21.07:0,21,352	0/0:32,0:32:54.18:0,54,870	0/0:29,0:29:68.08:0,68,1141	0/0:21,0:21:39.13:0,39,644	0/0:25,0:25:60.18:0,60,959	0/0:30,0:30:59.99:0,60,912	0/0:21,0:21:42.14:0,42,676
chr10	12425511	.	GAAAGAAAC	G	1109.12	PASS	AB=0.636;AC=7;AF=0.125;AN=56;BaseQRankSum=7.489;DP=546;FS=3.743;HRun=0;HaplotypeScore=128.1695;InbreedingCoeff=0.7194;MQ=54.93;MQ0=0;MQRankSum=-2.503;QD=15.62;ReadPosRankSum=-3.584;VQSLOD=1.8014;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:46.71:0,47,1819	0/0:5,0:5:9.03:0,9,311	0/0:24,0:21:17.37:0,17,568	0/0:23,0:20:4.09:0,4,313	0/0:22,0:22:38.97:0,39,1403	0/0:24,0:21:21.06:0,21,626	0/0:10,0:8:15.05:0,15,283	1/1:8,11:19:32.93:459,33,0	0/0:26,0:26:33.57:0,34,1145	0/0:27,0:27:63.19:0,63,2194	0/0:19,0:19:45.14:0,45,1432	0/0:11,0:11:18.06:0,18,542	0/0:15,0:15:23.91:0,24,815	0/0:14,0:14:15.05:0,15,474	0/0:16,0:16:17.97:0,18,411	0/0:12,0:12:21.07:0,21,658	0/0:22,0:21:33.58:0,34,1205	0/0:21,0:21:39.13:0,39,1469	0/1:6,8:14:20.75:435,0,21	1/1:8,14:20:12.03:243,12,0	1/1:3,13:15:6.02:111,6,0	0/0:15,0:15:27.04:0,27,801	0/0:27,0:27:48.15:0,48,1829	0/0:31,0:31:62.70:0,63,2205	0/0:18,0:18:42.14:0,42,1461	0/0:22,0:22:54.17:0,54,2027	0/0:27,0:27:48.16:0,48,1713	0/0:20,0:20:33.11:0,33,1305
chr10	12435440	.	G	GA	674.82	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-5.726;DP=552;FS=2.521;HRun=8;HaplotypeScore=56.2115;InbreedingCoeff=0.9854;MQ=63.74;MQ0=2;MQRankSum=1.244;QD=22.49;ReadPosRankSum=-0.250;VQSLOD=3.9697;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:42.02:0,42,384	0/0:14,0:14:36.02:0,36,330	0/0:23,0:20:27.88:0,28,364	0/0:16,0:16:26.95:0,27,233	0/0:31,0:31:90.05:0,90,824	1/1:3,12:15:36.11:415,36,0	1/1:2,13:15:33.10:381,33,0	0/0:27,0:27:66.02:0,66,599	0/0:24,0:24:69.04:0,69,632	0/0:25,0:25:72.04:0,72,659	0/0:21,0:21:53.99:0,54,485	0/0:15,0:15:30.01:0,30,275	0/0:12,0:12:36.02:0,36,329	0/0:16,0:16:45.02:0,45,412	0/0:15,0:15:42.02:0,42,384	0/0:9,0:8:17.99:0,18,165	0/0:18,0:18:39.48:0,39,357	0/0:28,2:30:14.70:0,15,626	0/0:26,0:24:57.02:0,57,522	0/0:26,0:26:72.02:0,72,655	0/0:18,0:18:51.01:0,51,462	0/0:28,0:28:75.02:0,75,682	0/0:25,0:25:72.04:0,72,659	0/0:14,0:14:42.02:0,42,384	0/0:19,0:20:47.02:0,47,418	0/0:21,0:21:51.01:0,51,466	0/0:17,0:17:51.03:0,51,466	0/0:14,0:14:36.02:0,36,330
chr10	12440182	.	GC	G	6305.55	PASS	AB=0.519;AC=35;AF=0.625;AN=56;BaseQRankSum=9.801;DP=373;FS=6.757;HRun=3;HaplotypeScore=72.3731;InbreedingCoeff=0.9166;MQ=57.54;MQ0=2;MQRankSum=4.134;QD=31.22;ReadPosRankSum=2.254;VQSLOD=5.0569;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:84.28:0,84,1197	1/1:0,7:7:21.07:260,21,0	0/0:16,0:11:27.05:0,27,365	0/0:16,0:12:33.11:0,33,469	1/1:1,20:21:57.18:704,57,0	0/0:20,0:20:51.17:0,51,732	0/0:12,0:12:33.07:0,33,452	0/0:18,0:14:36.11:0,36,499	1/1:1,17:18:17.21:424,17,0	1/1:1,14:15:42.13:521,42,0	1/1:1,21:22:60.19:735,60,0	1/1:3,9:12:18.06:223,18,0	1/1:0,4:4:9.02:111,9,0	1/1:0,10:10:21.07:260,21,0	1/1:0,2:2:6.02:74,6,0	1/1:0,14:14:36.11:446,36,0	0/1:1,13:14:0.40:441,0,0	1/1:0,3:3:9.03:111,9,0	0/0:9,0:5:15.05:0,15,216	0/0:22,0:22:63.20:0,63,887	0/0:11,0:11:33.11:0,33,475	1/1:0,13:13:33.10:409,33,0	1/1:0,11:11:33.10:409,33,0	1/1:0,9:9:24.08:297,24,0	0/0:16,0:16:42.13:0,42,586	1/1:0,10:10:30.08:359,30,0	1/1:1,12:13:30.09:372,30,0	1/1:0,4:4:12.04:148,12,0
chr10	12440246	.	TA	T	461.71	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=3.260;DP=390;FS=6.330;HRun=7;HaplotypeScore=47.6076;InbreedingCoeff=0.8410;MQ=56.29;MQ0=2;MQRankSum=0.996;QD=20.07;ReadPosRankSum=0.330;VQSLOD=2.7956;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:96.26:0,96,1189	0/0:9,0:9:24.08:0,24,302	0/0:14,0:4:9.03:0,9,113	0/0:7,0:3:6.02:0,6,75	0/0:23,0:23:66.21:0,66,830	1/1:3,15:18:42.09:427,42,0	1/1:0,5:5:15.03:152,15,0	0/0:22,0:21:57.18:0,57,717	0/0:12,0:12:30.10:0,30,377	0/0:17,0:17:48.15:0,48,604	0/0:23,0:23:63.19:0,63,780	0/0:7,0:7:21.07:0,21,262	0/0:3,0:3:9.03:0,9,113	0/0:11,0:11:21.07:0,21,264	0/0:8,0:8:24.08:0,24,302	0/0:9,0:9:18.06:0,18,223	0/0:19,0:19:54.17:0,54,679	0/0:6,0:6:18.06:0,18,226	0/0:11,0:10:24.08:0,24,302	0/0:30,0:30:87.28:0,87,1095	0/0:7,0:7:18.06:0,18,226	0/0:12,0:12:30.08:0,30,364	0/0:10,0:10:27.09:0,27,339	0/0:4,0:4:8.99:0,9,95	0/0:18,0:17:45.12:0,45,551	0/0:19,0:19:57.18:0,57,717	0/0:25,0:24:72.23:0,72,905	0/0:8,0:7:15.05:0,15,189
chr10	12440470	.	A	AAAG	24229.32	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-10.354;DP=544;FS=3.608;HRun=0;HaplotypeScore=61.8784;InbreedingCoeff=0.9858;MQ=77.71;MQ0=0;MQRankSum=-6.835;QD=52.11;ReadPosRankSum=2.227;VQSLOD=7.1872;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:81.28:0,81,1299	1/1:1,6:7:15.05:327,15,0	0/0:14,0:14:38.65:0,39,469	0/0:15,0:15:34.38:0,34,483	1/1:0,22:22:66.16:1354,66,0	1/1:0,19:19:45.15:981,45,0	1/1:0,7:7:15.05:326,15,0	1/1:3,25:28:78.24:1565,78,0	1/1:1,19:21:36.12:758,36,0	1/1:1,29:30:90.17:1702,90,0	1/1:4,24:28:66.03:1272,66,0	1/1:1,14:15:36.12:753,36,0	1/1:1,17:18:48.16:1046,48,0	1/1:1,11:13:33.11:720,33,0	1/1:1,32:35:84.29:1821,84,0	1/1:0,21:21:54.19:1177,54,0	1/1:1,10:11:24.08:523,24,0	1/1:4,13:16:39.13:850,39,0	1/1:3,10:12:30.10:607,30,0	1/1:2,23:25:66.16:1347,66,0	1/1:1,13:14:36.05:701,36,0	1/1:0,17:17:48.16:1007,48,0	1/1:0,19:19:48.08:989,48,0	1/1:0,13:13:33.11:720,33,0	0/0:22,0:22:60.20:0,60,940	1/1:1,28:30:87.30:1891,87,0	1/1:2,29:34:77.90:1615,78,0	1/1:5,0:5:15:178,15,0
chr10	12441559	.	TA	T	2516.46	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=10.960;DP=572;FS=3.174;HRun=7;HaplotypeScore=53.1550;InbreedingCoeff=0.9974;MQ=75.47;MQ0=0;MQRankSum=-1.241;QD=24.67;ReadPosRankSum=-1.898;VQSLOD=3.3978;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:66.21:0,66,828	0/0:16,0:16:39.08:0,39,463	0/0:12,0:12:27.08:0,27,331	0/0:14,0:14:32.82:0,33,368	0/0:28,0:28:75.24:0,75,941	0/0:25,0:25:69.22:0,69,868	0/0:12,0:12:33.11:0,33,414	1/1:2,28:30:84.19:856,84,0	0/0:21,0:21:63.20:0,63,793	0/0:35,0:35:96.31:0,96,1207	0/0:27,0:27:66.21:0,66,827	0/0:12,0:12:26.94:0,27,340	0/0:16,0:16:36.09:0,36,427	0/0:9,0:9:24.08:0,24,302	0/0:19,0:19:57.17:0,57,701	0/0:15,0:15:39.12:0,39,491	0/0:31,0:31:81.23:0,81,1003	0/0:11,0:11:33.11:0,33,415	1/1:3,21:24:62.71:627,63,0	1/1:4,26:30:75.17:765,75,0	1/1:0,18:18:42.10:429,42,0	0/0:21,0:21:54.17:0,54,677	0/0:30,0:30:84.26:0,84,1041	0/0:18,0:18:54.16:0,54,667	0/0:20,0:20:60.18:0,60,734	0/0:25,0:25:69.22:0,69,865	0/0:23,0:23:60.19:0,60,755	0/0:7,0:7:21.07:0,21,264
chr10	12444256	.	AACAC	A	3228.29	PASS	AB=0.827;AC=34;AF=0.708;AN=48;BaseQRankSum=1.239;DP=466;FS=4.178;HRun=0;HaplotypeScore=89.0740;InbreedingCoeff=0.6041;MQ=77.41;MQ0=12;MQRankSum=0.886;QD=11.83;ReadPosRankSum=3.010;VQSLOD=2.4545;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:26:15.05:0,15,349	1/1:8,5:12:6.02:94,6,0	./.	./.	1/1:7,4:11:9.03:140,9,0	0/1:15,2:17:42.41:82,0,42	0/1:13,3:18:19.42:123,0,19	0/0:18,0:18:12.48:0,12,157	1/1:7,11:18:27.09:421,27,0	1/1:11,3:15:9.02:121,9,0	1/1:3,1:4:3.01:47,3,0	1/1:12,3:17:20.73:308,21,0	1/1:7,3:11:12.03:168,12,0	1/1:8,6:13:12.04:187,12,0	1/1:8,10:18:18.06:281,18,0	1/1:9,3:12:3.01:47,3,0	1/1:11,9:19:21.07:328,21,0	1/1:10,2:12:4.32:91,4,0	0/0:16,0:16:15.05:0,15,251	0/0:7,0:10:7.08:0,7,65	0/0:29,0:28:15.02:0,15,208	1/1:12,3:16:9.02:121,9,0	1/1:6,4:10:6.02:94,6,0	1/1:13,13:26:33.11:515,33,0	0/0:15,0:15:20.79:0,21,349	./.	1/1:14,6:20:15.05:231,15,0	./.
chr10	12444923	.	GGA	G	114.19	PASS	AB=0.798;AC=3;AF=0.054;AN=56;BaseQRankSum=5.796;DP=574;FS=21.788;HRun=0;HaplotypeScore=87.7503;InbreedingCoeff=-0.0583;MQ=75.55;MQ0=2;MQRankSum=-5.841;QD=2.28;ReadPosRankSum=0.023;VQSLOD=0.1729;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,105,2055	0/0:10,5:14:23.89:0,24,461	0/0:23,0:23:68.04:0,68,1302	0/0:22,0:22:48.06:0,48,943	0/0:17,12:29:35.79:0,36,682	0/0:17,0:16:45.15:0,45,855	0/0:12,1:13:27.02:0,27,468	0/0:29,0:29:87.29:0,87,1692	0/0:24,0:24:66.18:0,66,1247	0/1:13,6:19:99:117,0,713	0/0:12,7:19:30:0,30,608	0/0:19,0:19:57.19:0,57,1131	0/0:17,0:17:51.17:0,51,1010	0/0:14,1:15:36.12:0,36,705	0/0:18,0:17:48.16:0,48,949	0/0:17,0:17:48.16:0,48,950	0/0:29,0:29:87.30:0,87,1694	0/0:7,0:7:18.06:0,18,342	0/0:11,0:11:33.11:0,33,632	0/0:19,10:29:44.78:0,45,911	0/0:27,0:26:78.27:0,78,1540	0/0:10,8:18:29.71:0,30,571	0/0:11,5:16:23.92:0,24,434	0/0:16,1:17:48.16:0,48,973	0/0:18,11:29:53.70:0,54,1039	0/1:20,4:24:79.58:80,0,1066	0/0:23,4:27:10.98:0,11,1228	0/1:5,2:7:17.05:17,0,263
chr10	12444935	.	G	GC	93.12	PASS	AB=0.806;AC=3;AF=0.054;AN=56;BaseQRankSum=5.538;DP=540;FS=16.833;HRun=0;HaplotypeScore=87.8491;InbreedingCoeff=-0.0589;MQ=71.56;MQ0=2;MQRankSum=-4.804;QD=1.94;ReadPosRankSum=0.436;VQSLOD=1.1988;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:87.29:0,87,1213	0/0:11,5:15:29.99:0,30,412	0/0:22,0:22:60.17:0,60,773	0/0:21,0:20:56.76:0,57,722	0/0:18,10:28:32.79:0,33,461	0/0:16,0:15:42.14:0,42,587	0/0:10,1:11:24.08:0,24,330	0/0:31,0:30:90.28:0,90,1227	0/0:24,0:24:63.77:0,64,868	0/1:13,6:19:99:116,0,486	0/0:12,5:17:29.98:0,30,413	0/0:17,0:17:48.16:0,48,666	0/0:17,0:17:51.17:0,51,712	0/0:14,1:15:29.55:0,30,418	0/0:17,0:16:42.14:0,42,586	0/0:17,0:17:51.17:0,51,706	0/0:25,0:25:75.25:0,75,1048	0/0:4,0:4:12.04:0,12,168	0/0:11,0:11:33.08:0,33,441	0/0:21,9:30:44.72:0,45,612	0/0:25,0:24:69.23:0,69,964	0/0:11,7:18:29.73:0,30,417	0/0:11,4:15:23.92:0,24,335	0/0:11,1:12:30.10:0,30,419	0/0:19,11:30:50.68:0,51,712	0/1:19,3:22:33.08:33,0,692	0/0:20,3:23:13.64:0,14,738	0/1:5,2:7:44.56:45,0,189
chr10	12453217	.	GA	G	8896.97	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=12.237;DP=508;FS=2.048;HRun=7;HaplotypeScore=50.8788;InbreedingCoeff=0.9814;MQ=80.58;MQ0=0;MQRankSum=-1.405;QD=27.38;ReadPosRankSum=3.582;VQSLOD=5.4573;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:54.17:0,54,679	1/1:0,7:7:21.05:213,21,0	0/0:17,0:16:45.14:0,45,557	0/0:19,0:18:28.93:0,29,335	1/1:1,21:22:57.08:570,57,0	0/0:21,0:21:60.18:0,60,742	0/0:8,0:8:24.08:0,24,302	0/0:30,0:30:78.25:0,78,981	1/1:0,26:26:75.17:765,75,0	1/1:2,25:27:75.14:756,75,0	1/1:1,22:23:63.13:636,63,0	1/1:1,12:13:33.07:337,33,0	1/1:1,12:13:36.08:367,36,0	1/1:2,16:18:45.10:459,45,0	1/1:2,8:10:21.04:214,21,0	1/1:1,10:11:24.05:245,24,0	1/1:0,27:27:78.18:795,78,0	1/1:1,8:9:21.05:214,21,0	0/0:12,0:12:36.10:0,36,432	0/0:35,0:35:93.29:0,93,1159	0/0:2,0:2:6.02:0,6,75	1/1:0,26:26:69.16:703,69,0	1/1:3,24:27:66.15:673,66,0	1/1:0,14:14:39.09:398,39,0	0/0:19,0:19:54.17:0,54,679	1/1:0,17:17:51.10:513,51,0	1/1:1,26:27:78.17:794,78,0	1/1:0,8:8:24.05:245,24,0
chr10	12454895	.	AAAG	A	2027.08	PASS	AC=26;AF=0.650;AN=40;BaseQRankSum=5.819;DP=329;FS=44.102;HRun=0;HaplotypeScore=32.6042;InbreedingCoeff=0.6964;MQ=20.48;MQ0=127;MQRankSum=0.795;QD=18.10;ReadPosRankSum=0.193;VQSLOD=1.4940;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:12:15.03:0,15,271	1/1:2,1:2:3.01:48,3,0	./.	./.	1/1:6,9:10:24.08:379,24,0	0/0:19,0:10:15.05:0,15,308	0/0:20,0:1:3.01:0,3,65	./.	./.	1/1:6,8:10:21.07:332,21,0	1/1:6,5:6:15.05:237,15,0	1/1:6,1:2:3.01:47,3,0	1/1:3,2:2:3.01:47,3,0	1/1:2,2:3:3.01:47,3,0	./.	./.	./.	./.	0/0:19,0:3:6.02:0,6,131	0/0:30,0:17:45.15:0,45,951	0/0:24,0:6:8.99:0,9,139	1/1:2,5:5:15.05:237,15,0	1/1:2,9:9:24.08:379,24,0	1/1:6,1:2:3.01:47,3,0	0/0:15,0:12:21.07:0,21,457	1/1:6,3:3:9.03:143,9,0	1/1:8,5:7:9.03:143,9,0	1/1:4,2:2:6.02:95,6,0
chr10	12455839	.	T	TGC	365.71	PASS	AC=10;AF=0.333;AN=30;BaseQRankSum=3.806;DP=299;FS=30.391;HRun=0;HaplotypeScore=29.0820;InbreedingCoeff=0.6589;MQ=30.81;MQ0=46;MQRankSum=-3.362;QD=19.25;ReadPosRankSum=1.412;VQSLOD=1.5029;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:39:81.26:0,81,1284	./.	0/0:35,2:13:14.28:0,14,486	0/0:30,3:12:33.11:0,33,536	./.	0/0:15,0:10:6.02:0,6,92	0/0:14,0:5:2.94:0,3,18	0/0:21,0:3:9.03:0,9,138	1/1:0,2:1:3.01:60,3,0	1/1:2,4:4:6.02:121,6,0	1/1:3,1:1:3.01:60,3,0	./.	./.	./.	./.	./.	./.	./.	0/0:20,0:8:15.05:0,15,244	0/0:9,0:4:6.02:0,6,97	0/0:55,0:35:20.98:0,21,278	./.	./.	./.	0/0:17,0:17:36.08:0,36,515	1/1:1,2:1:3.01:61,3,0	./.	1/1:0,4:3:9.03:181,9,0
chr10	12456346	.	G	GA	1092.57	PASS	AC=30;AF=0.600;AN=50;BaseQRankSum=0.776;DP=278;FS=62.195;HRun=3;HaplotypeScore=22.2992;InbreedingCoeff=0.7151;MQ=49.06;MQ0=36;MQRankSum=-7.246;QD=15.83;ReadPosRankSum=-0.829;VQSLOD=-0.0836;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:60.17:0,60,708	1/1:0,2:2:3.01:42,3,0	0/0:24,0:4:9.50:0,9,108	0/0:22,0:2:6.02:0,6,72	1/1:3,6:3:6.02:84,6,0	0/0:18,0:17:30.09:0,30,359	0/0:17,0:11:30.09:0,30,360	0/0:17,0:4:11.72:0,12,69	1/1:2,4:4:9.03:126,9,0	1/1:3,5:4:12.04:168,12,0	1/1:2,2:4:6.02:84,6,0	1/1:1,5:3:3.01:42,3,0	1/1:0,2:2:3.01:42,3,0	1/1:1,2:2:3.01:42,3,0	1/1:0,3:3:9.03:126,9,0	1/1:0,1:1:3.01:42,3,0	./.	./.	0/0:14,0:9:26.26:0,26,153	0/0:25,0:21:50.39:0,50,340	0/0:16,0:16:38.47:0,38,231	1/1:1,6:7:12:146,12,0	1/1:0,3:2:3.01:42,3,0	./.	0/0:21,0:21:39.12:0,39,467	1/1:1,2:2:5.98:61,6,0	1/1:5,4:4:8.99:104,9,0	1/1:0,3:3:9.03:126,9,0
chr10	12458642	.	C	CA	1613.14	PASS	AB=0.804;AC=28;AF=0.583;AN=48;BaseQRankSum=7.729;DP=337;FS=56.028;HRun=5;HaplotypeScore=29.6539;InbreedingCoeff=0.6268;MQ=39.29;MQ0=69;MQRankSum=-5.512;QD=13.67;ReadPosRankSum=1.428;VQSLOD=-0.6106;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:27:27.06:0,27,290	./.	0/0:4,0:3:9.02:0,9,97	0/0:3,0:3:6.01:0,6,64	./.	0/0:20,0:10:12.02:0,12,129	0/0:11,0:4:6.01:0,6,64	./.	1/1:2,9:9:18.02:217,18,0	1/1:2,6:2:6.02:79,6,0	1/1:6,3:2:2.97:20,3,0	1/1:5,4:5:6.02:79,6,0	1/1:2,3:3:9.03:118,9,0	1/1:2,4:5:6.02:79,6,0	1/1:0,7:7:18.02:218,18,0	1/1:1,6:7:18.06:237,18,0	0/1:7,4:7:45.59:121,0,46	1/1:1,2:1:3.01:39,3,0	0/0:26,0:13:39.10:0,39,419	0/0:40,0:27:60.01:0,60,644	0/0:11,0:8:12.03:0,12,129	1/1:4,3:4:5.98:59,6,0	0/1:6,1:2:13.93:14,0,26	./.	0/0:19,1:10:18.05:0,18,193	1/1:2,5:3:9.03:118,9,0	1/1:4,7:9:18.06:237,18,0	1/1:6,4:4:12.04:158,12,0
chr10	12460615	.	T	TA	1054.32	PASS	AB=0.625;AC=15;AF=0.500;AN=30;BaseQRankSum=2.771;DP=288;FS=58.986;HRun=3;HaplotypeScore=23.9547;InbreedingCoeff=0.7158;MQ=29.38;MQ0=60;MQRankSum=-6.470;QD=17.57;ReadPosRankSum=-0.250;VQSLOD=-0.0660;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:19:15.05:0,15,194	0/1:2,3:5:29.79:81,0,30	./.	./.	1/1:1,5:2:6.02:90,6,0	0/0:19,0:15:18.02:0,18,214	0/0:17,0:11:12.04:0,12,155	./.	./.	./.	1/1:1,10:8:21.07:291,21,0	./.	./.	./.	1/1:2,3:1:3.01:44,3,0	./.	./.	./.	0/0:24,0:10:27.09:0,27,350	0/0:32,0:32:54.16:0,54,674	0/0:25,0:21:33:0,33,427	1/1:2,5:4:9.03:123,9,0	1/1:3,9:7:18.06:269,18,0	./.	0/0:28,0:24:30.05:0,30,357	1/1:3,2:1:3.01:45,3,0	./.	1/1:2,7:7:18.06:251,18,0
chr10	12461280	.	GA	G	1110.70	PASS	AC=24;AF=0.522;AN=46;BaseQRankSum=8.707;DP=448;FS=0.000;HRun=5;HaplotypeScore=50.1494;InbreedingCoeff=0.7830;MQ=54.71;MQ0=21;MQRankSum=-7.137;QD=7.21;ReadPosRankSum=-0.166;VQSLOD=-0.6393;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:24:54.18:0,54,738	1/1:0,12:4:12.03:136,12,0	0/0:29,1:15:35.42:0,35,408	0/0:24,1:12:8.36:0,8,261	1/1:3,18:7:3.01:34,3,0	0/0:31,0:29:51.08:0,51,655	0/0:18,0:13:15.01:0,15,184	0/0:26,0:14:39.03:0,39,494	1/1:1,8:2:3.01:34,3,0	1/1:3,10:8:15.04:170,15,0	1/1:0,16:5:9.03:102,9,0	1/1:1,3:1:3.01:34,3,0	./.	./.	./.	1/1:1,3:3:3.01:34,3,0	0/0:2,1:1:2.96:0,3,19	./.	0/0:11,0:8:21.07:0,21,287	0/0:32,1:30:81.26:0,81,1092	0/0:34,0:33:75.25:0,75,1024	1/1:0,20:9:21.06:238,21,0	1/1:3,22:7:12.03:136,12,0	1/1:4,3:6:3.01:34,3,0	0/0:25,1:26:66.22:0,66,903	1/1:1,12:5:15.04:170,15,0	1/1:2,8:8:15.04:169,15,0	./.
chr10	12461481	.	C	CA	2395.53	PASS	AB=0.909;AC=47;AF=0.839;AN=56;BaseQRankSum=10.782;DP=438;FS=0.000;HRun=1;HaplotypeScore=82.0070;InbreedingCoeff=0.7353;MQ=52.56;MQ0=45;MQRankSum=-10.162;QD=8.09;ReadPosRankSum=0.625;VQSLOD=0.7682;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,117,1498	1/1:5,1:6:13.68:60,14,0	0/0:36,0:18:39.01:0,39,473	0/0:40,0:17:47.96:0,48,519	1/1:15,3:16:18.46:92,18,0	1/1:14,4:13:33.79:166,34,0	1/1:5,4:6:16.79:78,17,0	1/1:3,5:5:11.83:90,12,0	1/1:11,2:11:25.52:129,26,0	1/1:16,4:12:35.68:270,36,0	1/1:12,4:15:30.12:143,30,0	1/1:6,1:5:11.07:83,11,0	1/1:2,1:3:5.64:27,6,0	1/1:6,1:5:13.60:67,14,0	1/1:6,3:8:20.59:145,21,0	1/1:4,0:2:5.81:32,6,0	1/1:4,3:7:17.02:92,17,0	1/1:9,0:7:14.72:92,15,0	0/1:27,3:14:99:139,0,163	1/1:13,3:10:22.57:126,23,0	1/1:14,4:8:6.64:92,7,0	1/1:15,4:16:32.80:143,33,0	1/1:14,6:17:34.93:165,35,0	1/1:14,0:14:24.39:107,24,0	0/0:16,0:16:42.14:0,42,545	1/1:6,3:9:23.13:134,23,0	1/1:7,2:6:11.28:63,11,0	1/1:6,0:2:5.75:30,6,0
chr10	12461484	.	AT	A	2007.45	PASS	AB=0.857;AC=46;AF=0.821;AN=56;BaseQRankSum=11.407;DP=428;FS=2.844;HRun=1;HaplotypeScore=81.9061;InbreedingCoeff=0.6558;MQ=53.67;MQ0=39;MQRankSum=-9.764;QD=7.09;ReadPosRankSum=1.933;VQSLOD=0.9550;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,129,2032	1/1:5,1:6:12.40:45,12,0	0/0:35,0:18:42.14:0,42,648	0/0:43,1:21:51.57:0,52,614	1/1:15,3:17:21.61:150,22,0	1/1:12,4:11:29.16:137,29,0	1/1:4,4:6:15.58:60,16,0	1/1:1,7:4:11.61:71,12,0	1/1:10,2:10:21.50:109,21,0	1/1:14,5:12:35.30:257,35,0	1/1:11,4:14:28.76:140,29,0	1/1:6,1:5:5.60:34,6,0	1/1:2,1:3:5.27:21,5,0	1/1:6,1:5:9.39:35,9,0	1/1:3,4:6:7.92:33,8,0	1/1:4,0:2:5.60:26,6,0	1/1:6,3:9:21.76:130,22,0	1/1:9,0:7:14.49:83,14,0	0/1:23,3:12:67.26:67,0,89	1/1:14,3:11:23.46:134,23,0	0/1:14,4:8:2.65:19,0,3	1/1:14,4:16:29.18:123,29,0	1/1:11,6:15:32.87:153,33,0	1/1:14,0:14:23.45:154,23,0	0/0:16,0:16:42.13:0,42,648	1/1:5,4:8:22.38:121,22,0	1/1:8,2:7:10.60:52,11,0	1/1:6,0:2:5.49:24,5,0
chr10	12461816	.	T	TG	527.50	PASS	AC=18;AF=0.474;AN=38;BaseQRankSum=5.109;DP=136;FS=0.000;HRun=5;HaplotypeScore=15.5687;InbreedingCoeff=0.6242;MQ=44.96;MQ0=1;MQRankSum=-3.176;QD=15.51;ReadPosRankSum=0.591;VQSLOD=1.1723;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:18:42.07:0,42,435	./.	0/0:8,0:1:3.01:0,3,32	0/0:13,0:2:3.01:0,3,32	./.	0/0:5,0:5:12.03:0,12,129	0/0:2,0:2:3.01:0,3,32	0/0:12,0:11:30.08:0,30,322	1/1:2,1:1:3.01:39,3,0	1/1:2,4:6:15.05:188,15,0	./.	1/1:1,1:2:3.01:39,3,0	./.	1/1:3,2:3:3.01:34,3,0	1/1:5,2:4:3.01:39,3,0	./.	./.	./.	0/0:7,0:5:12.03:0,12,129	0/0:6,0:5:5.97:0,6,52	0/0:15,0:15:27.07:0,27,290	./.	1/1:0,2:2:6.02:73,6,0	1/1:1,1:2:3.01:39,3,0	0/0:8,0:8:11.99:0,12,116	1/1:0,2:2:6.02:79,6,0	1/1:2,3:5:12:138,12,0	./.
chr10	12462456	.	TC	T	5674.17	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=8.517;DP=341;FS=0.483;HRun=6;HaplotypeScore=39.1349;InbreedingCoeff=0.9100;MQ=62.49;MQ0=0;MQRankSum=0.233;QD=24.89;ReadPosRankSum=4.861;VQSLOD=3.7800;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:24.05:0,24,284	1/1:1,3:4:9.02:97,9,0	0/0:7,0:5:1.06:0,1,36	0/0:5,0:4:5.53:0,6,63	1/1:2,16:18:45.11:484,45,0	0/0:4,0:4:6.02:0,6,71	0/0:10,0:10:24.08:0,24,309	0/0:17,0:17:42.13:0,42,540	1/1:1,11:12:21.05:226,21,0	1/1:2,15:17:39.10:419,39,0	1/1:2,18:20:48.12:515,48,0	1/1:2,5:7:18.04:190,18,0	1/1:1,10:11:24.06:255,24,0	1/1:0,7:7:21.05:226,21,0	1/1:0,14:14:36.09:387,36,0	1/1:2,9:11:21.05:226,21,0	1/1:1,15:16:26.81:290,27,0	1/1:0,12:12:33.08:355,33,0	0/0:12,0:12:27.09:0,27,355	0/0:23,0:23:57.16:0,57,731	0/0:13,0:13:36.10:0,36,443	1/1:0,20:20:45.11:482,45,0	1/1:0,15:15:42.11:451,42,0	1/1:1,14:15:27.07:290,27,0	0/0:10,0:10:27.09:0,27,355	1/1:1,9:10:29.66:300,30,0	1/1:2,14:16:36.09:387,36,0	1/1:0,3:3:9.02:97,9,0
chr10	12462870	.	AT	A	2920.68	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=10.427;DP=549;FS=3.367;HRun=1;HaplotypeScore=116.5394;InbreedingCoeff=0.9961;MQ=54.46;MQ0=4;MQRankSum=-2.147;QD=32.82;ReadPosRankSum=-2.407;VQSLOD=2.7922;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:24:63.21:0,63,986	0/0:7,0:7:21.07:0,21,332	0/0:34,0:18:35.03:0,35,678	0/0:26,0:14:36.11:0,36,513	0/0:31,0:31:78.23:0,78,1221	0/0:18,0:18:39.13:0,39,623	0/0:16,0:16:48.16:0,48,764	1/1:2,26:28:81.26:1039,81,0	0/0:25,0:25:66.16:0,66,1025	0/0:22,0:22:57.32:0,57,838	0/0:27,0:25:72.18:0,72,1118	0/0:18,0:18:45.15:0,45,719	0/0:12,0:12:21.07:0,21,333	0/0:13,0:13:36.12:0,36,575	0/0:15,0:14:38.65:0,39,570	0/0:10,0:9:27.09:0,27,429	0/0:23,0:22:63.21:0,63,979	0/0:9,0:9:24.08:0,24,383	1/1:2,16:15:39.13:505,39,0	1/1:0,29:29:78.25:1012,78,0	1/1:0,14:14:42.08:525,42,0	0/0:24,0:24:66.19:0,66,1005	0/0:18,0:17:48.08:0,48,736	0/0:9,0:9:24:0,24,353	0/0:18,0:18:51.17:0,51,815	0/0:12,0:11:33.11:0,33,527	0/0:32,0:27:72.15:0,72,1098	0/0:16,0:16:48.16:0,48,760
chr10	12462889	.	G	GAGATAGATAGAT	8024.93	PASS	AC=50;AF=0.962;AN=52;BaseQRankSum=-0.616;DP=587;FS=2.989;HRun=0;HaplotypeScore=240.3979;InbreedingCoeff=0.1738;MQ=52.43;MQ0=4;MQRankSum=-0.314;QD=15.11;ReadPosRankSum=0.188;VQSLOD=3.9127;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:31,0:29:8.58:195,9,0	1/1:5,0:8:6.02:152,6,0	./.	./.	1/1:18,11:36:3.01:167,3,0	1/1:8,8:22:3.01:173,3,0	1/1:16,0:16:3.01:48,3,0	1/1:32,0:30:2.49:6,2,0	1/1:16,0:24:6.02:152,6,0	1/1:14,12:33:47.12:930,47,0	1/1:31,0:29:12.01:189,12,0	1/1:13,4:19:6.02:345,6,0	1/1:3,6:11:3.01:173,3,0	1/1:11,2:14:3.01:173,3,0	1/1:16,0:15:9.03:279,9,0	1/1:14,0:13:12.03:420,12,0	1/1:23,0:22:7.24:97,7,0	1/1:12,0:12:18.04:830,18,0	1/1:19,1:18:12.02:275,12,0	1/1:34,2:36:33.04:799,33,0	1/1:14,0:14:3.01:173,3,0	1/1:13,8:26:2.67:172,3,0	1/1:24,0:23:9.02:167,9,0	1/1:6,0:6:3.01:48,3,0	0/0:13,0:17:4.56:0,5,52	1/1:18,0:17:33.10:935,33,0	1/1:30,0:26:24.06:840,24,0	1/1:15,0:15:12.04:287,12,0
chr10	12464728	.	A	ATCCCCC	597.82	PASS	AC=16;AF=0.471;AN=34;BaseQRankSum=0.073;DP=229;FS=8.906;HRun=0;HaplotypeScore=25.0314;InbreedingCoeff=0.5328;MQ=30.12;MQ0=105;MQRankSum=-2.757;QD=16.61;ReadPosRankSum=-1.379;VQSLOD=0.5654;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:18:36.05:0,36,661	1/1:5,0:2:2.75:81,3,0	./.	./.	./.	0/0:6,0:3:3.01:0,3,57	0/0:8,0:2:0.47:0,0,1	0/0:42,0:9:24.01:0,24,390	./.	1/1:6,2:6:6:123,6,0	./.	1/1:1,1:1:3.01:99,3,0	1/1:0,2:2:3.01:99,3,0	./.	1/1:5,0:3:3.01:99,3,0	./.	0/0:10,0:8:2.97:0,3,20	./.	0/0:6,0:2:3.01:0,3,63	0/0:15,0:11:27.08:0,27,533	0/0:14,0:6:15.03:0,15,248	./.	./.	1/1:2,0:1:2.97:20,3,0	0/0:9,0:6:17.84:0,18,293	1/1:5,0:3:3.01:100,3,0	1/1:5,2:6:2.75:99,3,0	./.
chr10	12466496	.	G	GTCTA	809.53	PASS	AC=18;AF=0.750;AN=24;BaseQRankSum=1.281;DP=448;FS=37.916;HRun=0;HaplotypeScore=10.7653;InbreedingCoeff=0.3805;MQ=8.59;MQ0=328;MQRankSum=-0.789;QD=9.87;ReadPosRankSum=0.986;VQSLOD=0.7391;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:54,1:4:9.03:0,9,170	./.	./.	./.	1/1:10,2:2:6.02:161,6,0	0/0:31,0:3:3.01:0,3,57	./.	./.	./.	1/1:5,1:1:0.89:2,1,0	./.	./.	1/1:5,1:1:3.01:81,3,0	1/1:5,1:1:3.01:80,3,0	1/1:4,1:2:3.01:81,3,0	1/1:6,2:2:3.01:81,3,0	1/1:20,1:1:3.01:81,3,0	./.	./.	0/0:39,0:5:3.01:0,3,57	./.	./.	./.	./.	./.	1/1:9,0:1:2.96:19,3,0	1/1:3,6:6:12.04:322,12,0	./.
chr10	12468896	.	TAGA	T	5005.42	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-0.917;DP=604;FS=7.139;HRun=0;HaplotypeScore=112.1696;InbreedingCoeff=0.9940;MQ=70.17;MQ0=0;MQRankSum=-1.402;QD=39.73;ReadPosRankSum=-1.858;VQSLOD=5.5110;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,102,2274	0/0:10,0:10:27.09:0,27,611	0/0:16,0:16:42.06:0,42,865	0/0:20,0:20:44.32:0,44,974	0/0:26,0:26:78.27:0,78,1766	0/0:23,0:23:66.23:0,66,1495	0/0:24,0:24:66.23:0,66,1494	1/1:2,33:35:99:1541,99,0	0/0:31,0:31:87.30:0,87,1921	0/0:33,0:33:90.31:0,90,1993	0/0:20,0:20:60.20:0,60,1296	0/0:14,0:14:39.13:0,39,879	0/0:28,0:28:78.26:0,78,1725	0/0:11,0:11:33.11:0,33,736	0/0:17,0:17:48.16:0,48,1052	0/0:19,0:19:57.20:0,57,1258	0/0:14,0:14:42.13:0,42,889	0/0:6,0:6:15.05:0,15,340	1/1:1,27:25:72.19:1115,72,0	1/1:3,26:29:66.23:1099,66,0	1/1:2,32:34:75.73:1250,76,0	0/0:28,0:28:75.23:0,75,1600	0/0:32,0:32:93.31:0,93,2065	0/0:18,0:18:54.19:0,54,1222	0/0:12,0:12:36.12:0,36,816	0/0:16,0:16:48.16:0,48,1088	0/0:19,0:19:54.19:0,54,1200	0/0:7,0:7:21.07:0,21,460
chr10	12471903	.	G	GA	2137.43	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-12.402;DP=537;FS=2.833;HRun=9;HaplotypeScore=74.0763;InbreedingCoeff=0.8990;MQ=59.43;MQ0=8;MQRankSum=0.605;QD=22.04;ReadPosRankSum=-2.779;VQSLOD=3.3954;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:40:99:0,104,896	0/0:14,0:14:35.97:0,36,312	0/0:8,0:3:8.80:0,9,64	0/0:4,0:2:6:0,6,52	0/0:21,0:21:50.94:0,51,442	0/0:21,0:21:30.52:0,31,419	0/0:11,0:11:29.98:0,30,256	1/1:4,24:27:69.17:750,69,0	0/0:29,0:29:77.94:0,78,675	0/0:23,0:23:62.93:0,63,542	0/0:21,0:21:50.95:0,51,438	0/0:14,0:14:38.97:0,39,338	0/0:17,0:17:47.99:0,48,416	0/0:14,0:14:32.94:0,33,286	0/0:16,0:16:41.91:0,42,358	0/0:17,0:17:47.99:0,48,416	0/0:21,0:21:53.95:0,54,468	0/0:4,0:4:9:0,9,78	1/1:7,15:20:4.46:424,4,0	1/1:2,21:23:57.14:619,57,0	1/1:3,21:23:45.12:496,45,0	0/0:25,0:25:56.92:0,57,491	0/0:28,0:28:80.94:0,81,699	0/0:19,0:19:53.99:0,54,468	0/0:9,0:9:26.99:0,27,234	0/0:26,0:26:68.92:0,69,598	0/0:29,0:29:80.95:0,81,699	0/0:8,0:8:20.99:0,21,181
chr10	12476002	.	AT	A	2115.45	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=5.073;DP=440;FS=11.021;HRun=8;HaplotypeScore=65.9773;InbreedingCoeff=0.9724;MQ=65.20;MQ0=0;MQRankSum=2.589;QD=22.04;ReadPosRankSum=-2.581;VQSLOD=2.3820;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:69.68:0,70,835	0/0:8,0:8:24.07:0,24,290	0/0:14,0:14:27.04:0,27,297	0/0:9,0:8:18.05:0,18,214	0/0:20,0:20:57.17:0,57,689	0/0:12,0:12:30.09:0,30,362	0/0:10,0:10:27.08:0,27,326	1/1:2,23:25:63.06:596,63,0	0/0:13,0:13:39.12:0,39,471	0/0:22,0:22:60.18:0,60,725	0/0:21,0:21:60.18:0,60,725	0/0:7,0:7:18.06:0,18,217	0/0:8,0:8:21.06:0,21,254	0/0:9,0:9:27.08:0,27,326	0/0:11,0:11:30.09:0,30,362	0/0:4,0:4:9.03:0,9,109	0/0:11,0:11:33.06:0,33,372	0/0:13,0:13:33.10:0,33,399	1/1:3,25:28:68.80:666,69,0	1/1:3,24:27:69.10:666,69,0	1/1:2,14:16:36.06:348,36,0	0/0:19,0:19:51.09:0,51,581	0/0:21,0:21:57.17:0,57,679	0/0:16,1:17:39.79:0,40,503	0/0:18,0:18:48.14:0,48,570	0/0:23,0:23:66.20:0,66,788	0/0:24,0:24:66.20:0,66,796	0/0:5,0:5:15.05:0,15,181
chr10	12476993	.	AG	A	5167.18	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=11.785;DP=326;FS=17.634;HRun=2;HaplotypeScore=32.7832;InbreedingCoeff=0.9141;MQ=75.29;MQ0=0;MQRankSum=-0.183;QD=31.70;ReadPosRankSum=2.190;VQSLOD=2.8616;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:69.18:0,69,983	1/1:0,6:6:17.97:211,18,0	0/0:7,0:7:18.03:0,18,226	0/0:7,0:7:6.43:0,6,111	1/1:0,17:17:47.93:527,48,0	0/0:22,0:22:62.13:0,62,940	0/0:9,0:9:27.06:0,27,362	0/0:24,0:24:69.22:0,69,997	1/1:0,6:6:9.03:117,9,0	1/1:0,19:19:57.17:722,57,0	1/1:0,11:11:33.04:407,33,0	1/1:0,7:7:18.06:233,18,0	1/1:1,9:10:21.07:269,21,0	1/1:0,4:4:9.03:117,9,0	1/1:1,2:3:6.02:78,6,0	1/1:0,8:8:18.06:233,18,0	1/1:0,12:12:24.08:311,24,0	1/1:0,9:9:24.04:292,24,0	0/0:23,0:23:66.18:0,66,943	0/0:13,0:13:36.11:0,36,517	0/0:16,0:16:48.16:0,48,717	1/1:0,6:6:15.05:194,15,0	1/1:0,12:12:27:328,27,0	1/1:0,2:2:6.02:78,6,0	0/0:18,0:18:51.14:0,51,706	1/1:1,11:12:33.11:428,33,0	1/1:0,17:17:42.14:544,42,0	1/1:0,2:2:6.02:78,6,0
chr10	12478200	.	TGTGTGTG	T	2632.74	PASS	AB=0.988;AC=42;AF=0.778;AN=54;BaseQRankSum=1.123;DP=502;FS=38.293;HRun=0;HaplotypeScore=77.0006;InbreedingCoeff=0.1978;MQ=43.07;MQ0=84;MQRankSum=-1.245;QD=6.91;ReadPosRankSum=0.067;VQSLOD=0.0755;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:27:57.13:0,57,1312	1/1:6,0:6:2.94:18,3,0	0/0:33,0:13:27.07:0,27,302	0/0:41,0:12:20.94:0,21,234	0/1:21,0:10:11.03:67,0,11	0/1:20,0:14:72.86:73,0,78	0/1:8,0:7:33.93:102,0,34	1/1:22,0:12:21.07:261,21,0	1/1:17,0:9:7.24:146,7,0	1/1:22,0:16:7.43:299,7,0	1/1:12,0:11:5.88:37,6,0	1/1:3,7:8:4.83:79,5,0	1/1:9,0:8:5.95:57,6,0	0/1:13,0:8:44.80:102,0,45	1/1:12,0:7:12.04:153,12,0	1/1:16,1:15:11.77:73,12,0	0/1:24,2:21:5.14:115,0,5	1/1:17,0:12:1.48:216,1,0	1/1:19,0:10:18.06:227,18,0	1/1:18,0:12:9.03:115,9,0	1/1:14,0:7:9.03:114,9,0	./.	1/1:12,1:8:6.02:76,6,0	1/1:28,0:25:8.95:44,9,0	0/1:21,0:20:41.75:42,0,618	1/1:12,0:3:6.02:70,6,0	1/1:12,0:10:17.95:229,18,0	1/1:10,1:5:6.02:76,6,0
chr10	12478202	.	TGTGTG	T	3611.57	PASS	AB=1.000;AC=43;AF=0.796;AN=54;BaseQRankSum=0.763;DP=511;FS=31.920;HRun=0;HaplotypeScore=67.4348;InbreedingCoeff=0.2753;MQ=41.26;MQ0=92;MQRankSum=-1.840;QD=9.21;ReadPosRankSum=-0.299;VQSLOD=0.4369;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:27:57.13:0,57,1047	1/1:4,7:8:3.01:62,3,0	0/0:32,0:12:27.07:0,27,302	0/0:41,0:12:20.94:0,21,234	1/1:20,0:9:8.06:82,8,0	0/1:21,0:15:26.73:71,0,27	0/1:11,0:9:1.86:173,0,2	1/1:23,0:13:30.10:379,30,0	1/1:17,0:8:1.62:140,2,0	0/1:23,0:17:9.87:289,0,10	1/1:4,8:11:6.02:124,6,0	1/1:9,1:8:6.02:81,6,0	1/1:3,6:8:6.02:100,6,0	0/1:13,0:8:18.68:102,0,19	1/1:12,0:7:12.04:153,12,0	1/1:6,12:15:12.04:249,12,0	1/1:12,15:21:14.08:240,14,0	1/1:17,0:12:7.31:251,7,0	1/1:20,0:10:18.06:228,18,0	1/1:18,0:12:9.03:115,9,0	1/1:14,0:6:9.03:114,9,0	./.	1/1:11,1:7:6.02:76,6,0	1/1:9,19:25:9.87:135,10,0	0/1:21,0:20:31:31,0,520	1/1:12,0:3:6.02:74,6,0	1/1:13,0:11:20.88:267,21,0	1/1:10,0:4:6.02:76,6,0
chr10	12478204	.	TGTG	T	3152.62	PASS	AB=0.867;AC=45;AF=0.833;AN=54;BaseQRankSum=1.306;DP=509;FS=30.168;HRun=0;HaplotypeScore=60.6100;InbreedingCoeff=0.4557;MQ=40.82;MQ0=93;MQRankSum=-1.361;QD=8.08;ReadPosRankSum=0.092;VQSLOD=1.1025;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:27:56.59:0,57,826	1/1:11,0:8:3.01:30,3,0	0/0:32,0:12:27.07:0,27,302	0/0:40,0:11:20.94:0,21,234	1/1:21,0:10:9.03:126,9,0	1/1:21,0:15:10.46:91,10,0	1/1:11,0:9:17.79:203,18,0	1/1:21,0:11:30.10:381,30,0	0/1:17,0:8:2.90:138,0,3	0/1:8,16:18:9.70:314,0,10	1/1:12,0:11:6.01:61,6,0	1/1:10,0:8:6.01:67,6,0	1/1:9,0:8:6.02:69,6,0	1/1:13,0:8:6.22:110,6,0	1/1:12,0:7:12.04:153,12,0	1/1:17,1:15:12.02:122,12,0	1/1:25,1:20:15.03:170,15,0	1/1:17,0:12:8.94:241,9,0	1/1:18,0:8:18.06:229,18,0	1/1:17,0:11:9.03:115,9,0	1/1:17,0:8:9.03:114,9,0	./.	1/1:12,0:7:6.02:76,6,0	1/1:28,0:25:9.87:72,10,0	0/1:19,0:18:5.04:5,0,465	1/1:12,0:3:6.02:76,6,0	1/1:14,0:12:21.42:267,21,0	1/1:10,0:4:6.02:76,6,0
chr10	12478206	.	TG	T	2999.33	PASS	AB=1.000;AC=45;AF=0.833;AN=54;BaseQRankSum=1.013;DP=502;FS=29.265;HRun=2;HaplotypeScore=54.6252;InbreedingCoeff=0.5922;MQ=40.26;MQ0=97;MQRankSum=0.626;QD=8.24;ReadPosRankSum=-0.058;VQSLOD=-0.7183;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,1:27:56.09:0,56,701	1/1:11,0:8:2.90:16,3,0	0/0:31,0:11:27.07:0,27,302	0/0:40,0:10:20.73:0,21,231	1/1:5,16:10:9:98,9,0	1/1:4,16:15:12.04:155,12,0	1/1:2,9:9:18.06:230,18,0	1/1:5,16:11:30.10:382,30,0	1/1:6,11:8:6.60:145,7,0	0/1:24,0:18:9.87:279,0,10	1/1:10,1:10:5.84:35,6,0	1/1:11,0:8:5.88:53,6,0	1/1:8,1:8:5.91:55,6,0	1/1:4,8:7:12.04:153,12,0	1/1:1,10:6:12.04:153,12,0	1/1:17,0:14:11.61:66,12,0	1/1:25,1:20:14.52:83,15,0	1/1:5,12:12:5.46:231,5,0	1/1:6,11:7:18.06:229,18,0	1/1:4,12:10:9.03:115,9,0	1/1:8,8:7:9.03:115,9,0	./.	1/1:5,8:8:9.01:100,9,0	1/1:24,1:22:9.66:44,10,0	0/0:18,1:18:7.83:0,8,453	1/1:3,8:2:6.02:78,6,0	1/1:3,12:13:21.46:268,21,0	1/1:5,6:4:6.02:76,6,0
chr10	12478207	.	GGT	G	153.51	PASS	AB=0.948;AC=22;AF=0.500;AN=44;BaseQRankSum=4.761;DP=505;FS=8.562;HRun=0;HaplotypeScore=67.2616;InbreedingCoeff=0.2434;MQ=39.50;MQ0=101;MQRankSum=-2.144;QD=0.67;ReadPosRankSum=3.134;VQSLOD=0.3050;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:21,5:26:36.05:36,0,257	1/1:8,0:7:2.74:12,3,0	./.	0/0:42,0:9:0:0,0,0	1/1:17,0:10:2.68:11,3,0	0/0:18,0:14:4.78:0,5,18	0/0:12,0:10:2.50:0,2,9	0/0:23,0:11:3.44:0,3,21	1/1:13,0:8:2.96:9,3,0	0/1:20,0:18:15.12:15,0,25	1/1:9,0:9:5.49:25,5,0	1/1:10,0:9:2.34:12,2,0	1/1:8,0:7:2.58:12,3,0	0/0:9,0:8:5.48:0,5,32	0/0:12,0:7:3.01:0,3,36	1/1:15,0:14:10.87:49,11,0	1/1:21,0:20:13.71:60,14,0	0/0:16,0:11:0:0,0,0	./.	./.	./.	./.	0/0:11,0:8:2.84:0,3,14	1/1:24,0:21:5.49:24,5,0	0/1:17,0:17:13.46:13,0,73	./.	0/1:12,0:12:0.07:0,0,0	0/0:10,0:4:2.97:0,3,20
chr10	12478579	.	ACTCT	A	1610.66	PASS	AB=0.882;AC=28;AF=0.609;AN=46;BaseQRankSum=0.100;DP=520;FS=0.000;HRun=0;HaplotypeScore=86.7970;InbreedingCoeff=0.3551;MQ=70.88;MQ0=14;MQRankSum=-1.131;QD=6.34;ReadPosRankSum=0.240;VQSLOD=1.9236;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:29:17.80:0,18,272	./.	./.	./.	0/1:14,0:13:3.47:6,0,3	0/0:31,0:30:8.60:0,9,96	0/0:15,0:14:9.02:0,9,141	0/0:36,0:35:0:0,0,0	1/1:19,7:26:12.51:187,13,0	1/1:11,0:11:3.01:46,3,0	1/1:11,0:11:2.99:24,3,0	0/0:11,0:11:2.37:0,2,8	1/1:9,3:12:6.01:74,6,0	1/1:8,0:8:3.01:44,3,0	0/1:9,1:11:28.47:38,0,28	1/1:10,7:19:18.03:237,18,0	0/1:10,6:16:38.43:109,0,38	1/1:9,1:9:5.99:68,6,0	0/1:21,1:20:20.94:21,0,44	./.	0/0:24,0:24:5.74:0,6,37	1/1:19,0:18:2.74:46,3,0	1/1:6,4:9:9.03:139,9,0	1/1:17,13:30:36.03:526,36,0	0/0:16,0:15:5.75:0,6,114	1/1:14,0:14:8.94:50,9,0	1/1:13,2:19:9.67:145,10,0	./.
chr10	12478623	.	T	TTA	80.60	PASS	AB=0.556;AC=1;AF=0.018;AN=56;BaseQRankSum=5.413;DP=561;FS=6.319;HRun=0;HaplotypeScore=87.6699;InbreedingCoeff=-0.0263;MQ=71.86;MQ0=19;MQRankSum=-0.733;QD=3.22;ReadPosRankSum=-3.736;VQSLOD=0.5021;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:65.35:0,65,920	0/0:4,0:4:6.02:0,6,92	0/0:34,0:20:26.54:0,27,559	0/0:59,0:29:15.21:0,15,395	0/0:19,0:19:48.14:0,48,700	0/1:5,20:24:99:155,0,109	0/0:6,10:16:8.97:0,9,114	0/0:22,0:22:63.21:0,63,986	0/0:25,0:25:56.41:0,56,785	0/0:21,0:21:60.19:0,60,922	0/0:15,0:15:39.10:0,39,574	0/0:15,0:15:35.47:0,35,519	0/0:19,0:18:45.09:0,45,624	0/0:6,0:6:15.02:0,15,189	0/0:22,0:21:56.86:0,57,811	0/0:16,0:16:36.92:0,37,447	0/0:19,0:19:41.41:0,41,521	0/0:13,0:12:33.08:0,33,447	0/0:21,0:21:54.43:0,54,829	0/0:18,0:15:32.65:0,33,452	0/0:16,0:16:35.78:0,36,497	0/0:13,0:13:32.73:0,33,497	0/0:20,0:19:41.74:0,42,548	0/0:27,0:27:46.44:0,46,675	0/0:16,0:15:32.47:0,32,491	0/0:22,0:20:52.31:0,52,687	0/0:23,0:23:54.01:0,54,694	0/0:4,0:4:12.04:0,12,175
chr10	12482951	.	A	ATC	8211.50	PASS	AB=0.899;AC=50;AF=0.893;AN=56;BaseQRankSum=-2.802;DP=427;FS=10.909;HRun=0;HaplotypeScore=109.9147;InbreedingCoeff=0.4013;MQ=98.01;MQ0=8;MQRankSum=-3.173;QD=21.84;ReadPosRankSum=-0.184;VQSLOD=5.0904;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:96.32:0,96,1278	1/1:2,5:7:9.03:156,9,0	0/1:51,5:37:85.48:85,0,185	0/1:54,2:37:99:190,0,196	1/1:5,3:8:18.06:307,18,0	1/1:4,13:15:12.04:208,12,0	1/1:2,8:10:20.96:363,21,0	1/1:5,28:33:84.23:1346,84,0	1/1:1,5:6:6.02:104,6,0	1/1:5,10:15:39.13:669,39,0	1/1:2,14:16:23.97:412,24,0	1/1:0,2:2:3.01:52,3,0	1/1:0,3:3:5.81:104,6,0	1/1:2,1:3:3.01:52,3,0	1/1:4,4:8:6.01:77,6,0	1/1:0,5:5:9.03:156,9,0	1/1:4,6:10:16.30:261,16,0	1/1:2,1:3:3.01:52,3,0	1/1:1,9:10:27.02:402,27,0	1/1:0,25:25:51.17:883,51,0	1/1:3,5:8:15.05:260,15,0	1/1:1,11:11:21.07:364,21,0	1/1:0,10:10:11.85:208,12,0	1/1:0,6:7:9.03:156,9,0	0/0:19,0:19:57.17:0,57,742	1/1:4,11:15:42.13:684,42,0	1/1:2,5:7:15.03:230,15,0	1/1:3,9:12:30.05:433,30,0
chr10	12482954	.	T	TCG	4154.80	PASS	AB=0.978;AC=41;AF=0.732;AN=56;BaseQRankSum=5.954;DP=443;FS=17.276;HRun=0;HaplotypeScore=128.6135;InbreedingCoeff=0.0179;MQ=98.21;MQ0=9;MQRankSum=-2.406;QD=10.63;ReadPosRankSum=2.735;VQSLOD=2.1825;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:96.33:0,96,1469	0/1:7,0:7:12.94:69,0,13	0/1:62,3:41:99:104,0,337	0/1:64,8:39:99:283,0,251	1/1:8,0:8:17.99:157,18,0	0/1:17,0:16:3.96:106,0,4	1/1:10,0:10:20.74:190,21,0	0/1:32,0:32:0.12:532,0,0	1/1:6,0:6:6.01:61,6,0	0/1:15,0:15:3:290,0,3	1/1:16,0:16:23.89:212,24,0	1/1:2,0:2:3:27,3,0	1/1:3,0:3:5.79:52,6,0	0/1:2,0:2:16.96:21,0,17	0/1:8,0:8:19.44:19,0,19	1/1:5,0:5:9.01:86,9,0	0/1:9,0:9:18.86:130,0,19	0/1:2,0:2:16.97:20,0,17	0/1:10,0:10:4.69:138,0,5	1/1:25,0:25:51.03:463,51,0	1/1:6,0:6:15.01:134,15,0	1/1:12,0:11:21.01:189,21,0	1/1:10,0:10:11.82:109,12,0	1/1:7,0:7:9:81,9,0	0/0:19,0:19:57.19:0,57,871	1/1:14,0:14:38.45:366,38,0	1/1:6,0:6:12.01:111,12,0	1/1:13,0:13:21.01:206,21,0
chr10	12482960	.	TAG	T	233.11	PASS	AB=0.924;AC=13;AF=0.232;AN=56;BaseQRankSum=4.240;DP=439;FS=10.449;HRun=0;HaplotypeScore=140.6716;InbreedingCoeff=-0.0560;MQ=96.17;MQ0=9;MQRankSum=-0.954;QD=2.59;ReadPosRankSum=-0.005;VQSLOD=2.0792;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:95.25:0,95,1858	0/0:6,0:6:8.96:0,9,116	0/0:69,0:39:53.32:0,53,589	0/0:82,0:44:34.69:0,35,769	0/1:4,4:8:29.13:113,0,29	0/0:16,1:15:8.75:0,9,130	0/0:10,0:10:20.89:0,21,260	0/0:34,0:30:60.75:0,61,1218	0/1:5,0:5:9:12,0,9	0/1:14,1:15:51.86:52,0,326	0/1:16,0:16:7.02:7,0,211	0/0:2,0:2:2.99:0,3,23	0/0:3,0:3:6:0,6,72	0/0:1,0:1:2.99:0,3,23	1/1:4,2:6:3:27,3,0	0/1:4,0:4:3.56:4,0,40	0/1:7,1:7:39.98:40,0,50	1/1:1,0:1:2.37:8,2,0	0/0:10,0:10:26.79:0,27,332	0/0:25,0:25:51.11:0,51,751	0/1:7,1:8:11.85:12,0,182	0/0:10,0:9:12.72:0,13,246	0/0:9,0:9:11.88:0,12,136	0/0:7,0:7:1.56:0,2,42	0/0:18,0:18:54.17:0,54,977	0/1:13,1:14:60.73:84,0,61	0/1:5,0:5:14.94:15,0,30	0/0:10,0:10:4.19:0,4,73
chr10	12482978	.	TATAG	T	1356.87	PASS	AB=0.756;AC=23;AF=0.500;AN=46;BaseQRankSum=3.568;DP=419;FS=11.316;HRun=0;HaplotypeScore=141.3879;InbreedingCoeff=0.5322;MQ=92.21;MQ0=10;MQRankSum=-3.408;QD=15.08;ReadPosRankSum=-0.548;VQSLOD=2.8718;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:52.33:0,52,1309	1/1:5,3:8:2.98:22,3,0	0/0:73,0:40:44.96:0,45,454	0/0:93,0:47:17.21:0,17,365	0/1:3,1:4:0:0,0,0	0/0:18,0:17:5.89:0,6,58	0/0:9,0:9:14.26:0,14,185	0/0:34,0:27:50.04:0,50,872	1/1:0,4:4:3.01:48,3,0	0/1:9,3:12:10.73:230,0,11	1/1:8,5:13:3.01:47,3,0	./.	./.	./.	./.	1/1:0,2:2:6.02:81,6,0	1/1:5,2:6:5.99:67,6,0	1/1:1,1:2:3.01:47,3,0	0/0:12,0:12:2.57:0,3,260	0/0:22,0:22:33.08:0,33,555	0/0:8,0:7:9.03:0,9,153	1/1:2,3:5:6.01:73,6,0	./.	1/1:2,2:4:3.01:46,3,0	0/0:18,0:18:51.16:0,51,1068	0/1:8,8:15:9.28:502,0,9	1/1:1,3:3:6.02:94,6,0	1/1:7,2:9:20.80:258,21,0
chr10	12482982	.	G	GAT	1579.88	PASS	AB=0.850;AC=23;AF=0.523;AN=44;BaseQRankSum=3.036;DP=412;FS=6.364;HRun=0;HaplotypeScore=120.9856;InbreedingCoeff=0.6206;MQ=89.67;MQ0=12;MQRankSum=-3.187;QD=18.59;ReadPosRankSum=0.224;VQSLOD=3.7461;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:54.65:0,55,773	1/1:7,1:8:2.98:22,3,0	0/0:72,0:39:27.42:0,27,462	0/0:87,0:45:22.75:0,23,367	./.	0/0:20,1:19:5.95:0,6,86	0/0:10,0:10:15.05:0,15,207	0/0:31,0:24:40.60:0,41,652	1/1:4,0:4:3.01:52,3,0	1/1:6,3:9:2.98:298,3,0	1/1:9,4:13:3.01:48,3,0	./.	./.	./.	./.	1/1:2,0:2:6.02:102,6,0	1/1:7,1:7:6.02:101,6,0	1/1:2,0:2:3.01:48,3,0	0/0:10,0:10:24.81:0,25,274	0/0:20,0:20:33.08:0,33,434	0/0:8,0:7:9.03:0,9,129	1/1:4,0:4:6.01:73,6,0	./.	1/1:2,1:3:3.01:46,3,0	0/0:17,0:17:51.16:0,51,712	0/1:14,3:15:22.23:577,0,22	1/1:4,1:4:6.02:98,6,0	1/1:10,0:10:23.77:276,24,0
chr10	12482992	.	GAT	G	300.18	PASS	AB=0.950;AC=12;AF=0.273;AN=44;BaseQRankSum=3.108;DP=348;FS=2.518;HRun=0;HaplotypeScore=103.6105;InbreedingCoeff=0.1774;MQ=69.24;MQ0=14;MQRankSum=0.287;QD=1.48;ReadPosRankSum=-2.953;VQSLOD=1.1850;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:57.04:0,57,996	./.	0/1:49,1:24:99:106,0,220	0/1:60,0:24:21.22:21,0,62	./.	1/1:13,8:18:2.98:22,3,0	1/1:3,6:9:11.80:109,12,0	0/1:24,6:16:88.75:89,0,356	0/0:4,0:4:2.92:0,3,17	0/0:9,0:8:19.26:0,19,181	0/1:15,0:15:0:0,0,0	./.	./.	./.	./.	0/0:2,0:2:3.01:0,3,32	0/0:9,1:9:3.01:0,3,47	0/1:2,0:2:0:0,0,0	0/1:7,2:9:67.33:67,0,147	0/0:15,1:16:18.02:0,18,258	0/0:4,2:4:3.01:0,3,49	0/1:2,0:2:0:0,0,0	0/1:3,0:2:0:0,0,0	0/0:3,0:3:0:0,0,0	0/0:16,0:16:39.13:0,39,688	0/0:19,0:17:32.67:0,33,349	0/0:6,0:4:2.96:0,3,19	0/0:6,0:6:4.25:0,4,37
chr10	12483000	.	TATAA	T	1464	PASS	AB=0.825;AC=24;AF=0.632;AN=38;BaseQRankSum=2.613;DP=264;FS=0.000;HRun=0;HaplotypeScore=78.5830;InbreedingCoeff=0.4591;MQ=58.16;MQ0=11;MQRankSum=-4.030;QD=12.20;ReadPosRankSum=0.929;VQSLOD=2.5662;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:25:49.67:0,50,1058	./.	0/0:29,0:11:15.83:0,16,192	0/0:37,0:16:5.34:0,5,52	0/0:2,3:5:0:0,0,0	1/1:5,16:18:2.97:35,3,0	1/1:2,5:7:3:29,3,0	0/1:24,3:12:63.83:149,0,64	1/1:0,4:4:3.01:56,3,0	1/1:3,4:6:14.17:232,14,0	0/0:7,6:13:0:0,0,0	./.	./.	./.	./.	1/1:0,1:1:3.01:43,3,0	1/1:7,1:7:2.70:21,3,0	./.	1/1:4,1:5:11.35:105,11,0	1/1:5,8:13:8.85:106,9,0	./.	./.	0/1:2,1:2:0:0,0,0	./.	0/0:10,0:10:30.10:0,30,683	1/1:4,13:15:32.01:721,32,0	1/1:2,3:3:3.01:57,3,0	1/1:1,1:2:3.01:37,3,0
chr10	12483003	.	A	AG	177.35	PASS	AB=0.917;AC=21;AF=0.525;AN=40;BaseQRankSum=3.411;DP=241;FS=1.093;HRun=0;HaplotypeScore=74.6161;InbreedingCoeff=0.4104;MQ=55.68;MQ0=10;MQRankSum=-3.083;QD=1.54;ReadPosRankSum=2.905;VQSLOD=1.8508;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:49.47:0,49,652	./.	0/0:22,0:10:15.90:0,16,199	0/0:30,0:12:9.55:0,10,74	0/0:5,1:6:2.98:0,3,21	1/1:18,3:18:1.98:8,2,0	0/0:6,0:6:2.96:0,3,19	0/1:26,0:11:17.53:18,0,121	1/1:4,0:4:2.60:10,3,0	1/1:4,1:4:10.53:43,11,0	1/1:9,4:13:0.89:2,1,0	./.	./.	0/1:2,1:2:0:0,0,0	./.	0/0:1,0:1:1.82:0,2,5	0/0:7,2:8:5.92:0,6,39	./.	0/1:4,0:4:10.14:10,0,22	1/1:12,0:12:5.96:35,6,0	./.	./.	1/1:2,1:2:0.47:1,0,0	./.	0/0:10,0:10:30.10:0,30,419	1/1:16,1:15:18.80:142,19,0	1/1:3,2:3:2.74:12,3,0	1/1:1,1:2:3:25,3,0
chr10	12483004	.	A	AT	57.61	PASS	AB=0.849;AC=16;AF=0.400;AN=40;BaseQRankSum=4.350;DP=249;FS=0.000;HRun=0;HaplotypeScore=76.8198;InbreedingCoeff=0.3905;MQ=50.28;MQ0=10;MQRankSum=-4.033;QD=0.65;ReadPosRankSum=3.860;VQSLOD=0.5169;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:46.37:0,46,632	./.	0/0:19,0:7:14.38:0,14,189	0/0:28,0:12:9.55:0,10,75	0/0:5,0:6:0:0,0,0	1/1:19,3:19:1.98:8,2,0	0/0:6,0:6:2.71:0,3,16	0/0:32,0:15:13.30:0,13,227	1/1:4,0:4:2.60:10,3,0	0/1:5,1:5:5.57:30,0,6	0/1:11,3:15:0:0,0,0	./.	./.	0/1:2,0:2:0:0,0,0	./.	0/0:1,0:1:1.82:0,2,5	0/0:8,2:9:4.82:0,5,35	./.	0/0:4,0:4:9.83:0,10,68	0/1:12,0:12:0.62:1,0,34	./.	./.	1/1:2,0:2:0.47:1,0,0	./.	0/0:10,0:10:30.10:0,30,417	1/1:16,0:15:0.22:93,0,0	1/1:3,2:3:2.74:12,3,0	1/1:1,0:2:2.22:7,2,0
chr10	12483038	.	GAT	G	119.26	PASS	AB=0.974;AC=11;AF=0.229;AN=48;BaseQRankSum=-1.877;DP=255;FS=0.000;HRun=0;HaplotypeScore=77.0268;InbreedingCoeff=0.3216;MQ=44.12;MQ0=11;MQRankSum=-0.820;QD=1.23;ReadPosRankSum=-1.701;VQSLOD=1.3398;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:24.03:0,24,404	0/0:7,0:7:6.02:0,6,108	0/0:8,0:3:3.01:0,3,54	0/1:14,0:2:0.13:0,0,0	0/0:11,0:11:21.07:0,21,379	0/0:8,10:14:2.91:0,3,55	0/1:2,0:2:0:0,0,0	0/1:47,2:24:66.98:67,0,973	./.	0/0:13,0:12:36.09:0,36,599	0/0:17,0:17:21.04:0,21,358	0/1:5,0:4:0:0,0,0	0/1:3,0:3:0:0,0,0	0/0:4,0:3:3.01:0,3,54	./.	0/1:2,0:2:0:0,0,0	0/0:10,0:9:6:0,6,110	0/0:4,0:4:5.71:0,6,108	0/1:5,1:4:23.58:32,0,24	1/1:5,7:12:5.48:85,5,0	1/1:4,0:3:3.01:42,3,0	./.	0/0:3,0:2:2.98:0,3,54	./.	0/0:6,0:6:18.06:0,18,328	0/0:16,0:14:32.18:0,32,486	0/0:8,0:6:12.04:0,12,203	0/0:12,0:12:30.01:0,30,428
chr10	12483052	.	TAG	T	85.26	PASS	AB=0.916;AC=7;AF=0.140;AN=50;BaseQRankSum=3.843;DP=281;FS=5.675;HRun=0;HaplotypeScore=92.2749;InbreedingCoeff=0.1302;MQ=62.02;MQ0=9;MQRankSum=-1.211;QD=1.58;ReadPosRankSum=-0.229;VQSLOD=1.0170;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:23.38:0,23,411	0/0:6,2:8:5.99:0,6,63	0/0:10,0:3:3.01:0,3,58	0/0:25,0:11:6.61:0,7,101	0/0:11,3:14:29.89:0,30,284	0/1:20,0:16:11.98:18,0,12	0/1:3,1:4:0:0,0,0	0/0:47,0:27:74.39:0,74,1223	./.	0/1:9,2:10:61.73:62,0,240	0/0:13,5:18:23.61:0,24,220	0/1:3,0:2:0:0,0,0	0/0:4,0:4:2.92:0,3,31	0/0:2,1:3:3.01:0,3,32	0/1:1,0:1:0:0,0,0	0/1:2,0:2:0:0,0,0	0/0:8,1:8:8.59:0,9,74	0/0:7,0:6:10.67:0,11,82	0/0:4,0:4:12.02:0,12,180	0/0:14,0:14:11.79:0,12,231	0/0:6,0:6:2.98:0,3,58	./.	0/0:3,0:2:2.98:0,3,32	./.	0/0:6,0:6:18.06:0,18,348	0/1:9,4:11:98.60:99,0,224	0/0:13,2:13:18.95:0,19,191	0/0:13,1:13:31.96:0,32,242
chr10	12483058	.	GAT	G	2546.13	PASS	AB=0.556;AC=27;AF=0.540;AN=50;BaseQRankSum=2.328;DP=282;FS=44.978;HRun=0;HaplotypeScore=82.4870;InbreedingCoeff=0.6193;MQ=63.93;MQ0=10;MQRankSum=1.725;QD=19.00;ReadPosRankSum=4.715;VQSLOD=1.5752;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:21.43:0,21,376	1/1:2,6:8:6.02:86,6,0	0/0:10,0:3:3.01:0,3,55	0/0:27,0:12:9.53:0,10,122	1/1:3,11:14:30.10:430,30,0	0/0:19,0:16:2.88:0,3,45	0/0:5,0:5:2.96:0,3,44	0/0:41,0:23:58.83:0,59,841	./.	1/1:4,8:11:8.53:362,9,0	1/1:6,12:18:24.08:344,24,0	0/1:0,3:2:0:0,0,0	1/1:0,4:4:3.01:43,3,0	1/1:2,2:3:3.01:43,3,0	0/1:1,1:2:0:0,0,0	0/1:0,3:3:0:0,0,0	1/1:6,4:8:8.81:128,9,0	1/1:2,5:6:0.27:78,0,0	0/0:4,0:4:8.42:0,8,126	0/0:14,0:14:11.79:0,12,220	0/0:6,0:6:2.98:0,3,55	./.	1/1:2,1:2:3.01:43,3,0	./.	0/0:6,0:6:18.05:0,18,292	1/1:5,8:12:7.55:334,8,0	1/1:5,14:16:27.08:369,27,0	1/1:2,12:13:33.06:448,33,0
chr10	12483147	.	G	GAT	127.25	PASS	AB=0.967;AC=13;AF=0.271;AN=48;BaseQRankSum=0.919;DP=442;FS=17.837;HRun=0;HaplotypeScore=106.0956;InbreedingCoeff=-0.1460;MQ=91.40;MQ0=20;MQRankSum=-0.143;QD=0.90;ReadPosRankSum=-1.278;VQSLOD=0.3544;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:25.90:0,26,349	./.	0/0:67,0:36:12.74:0,13,324	0/0:110,0:47:36.27:0,36,346	0/1:12,0:12:25.01:47,0,25	0/0:19,1:19:14.72:0,15,91	0/0:8,0:7:16.79:0,17,100	0/1:39,0:24:8.75:9,0,336	0/0:5,0:5:2.94:0,3,18	0/1:5,0:5:30.79:39,0,31	0/1:13,1:13:4.85:5,0,39	1/1:3,0:3:2.04:6,2,0	0/1:5,0:5:21.70:22,0,27	0/0:1,0:1:2.94:0,3,18	./.	1/1:4,0:4:2.50:9,2,0	0/0:8,2:8:1.54:0,2,31	0/1:9,0:8:12.50:13,0,69	0/0:9,0:7:14.83:0,15,108	0/0:12,0:12:13.68:0,14,86	0/0:6,0:5:2.94:0,3,18	./.	0/0:3,0:2:2.92:0,3,17	./.	0/0:12,0:12:36.12:0,36,516	0/1:12,0:10:11.77:12,0,86	0/1:22,0:21:63.83:64,0,121	0/1:12,5:15:32:32,0,87
chr10	12483149	.	TAGAG	T	854.22	PASS	AB=0.968;AC=15;AF=0.313;AN=48;BaseQRankSum=0.073;DP=439;FS=11.136;HRun=0;HaplotypeScore=106.1144;InbreedingCoeff=-0.2231;MQ=90.84;MQ0=21;MQRankSum=-0.128;QD=3.26;ReadPosRankSum=-1.309;VQSLOD=1.3247;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:27.07:0,27,695	./.	0/0:69,0:36:13.28:0,13,355	0/1:115,0:46:24.26:24,0,195	0/1:10,1:11:70.55:71,0,84	0/0:19,0:18:15:0,15,219	0/0:8,0:7:16.73:0,17,192	0/1:37,0:24:67.95:68,0,401	0/0:5,0:5:2.94:0,3,18	0/1:5,0:5:76.09:76,0,82	0/1:14,1:14:80.04:95,0,80	1/1:3,0:3:3.01:53,3,0	0/1:5,0:5:61.68:63,0,62	0/0:1,0:1:3.01:0,3,47	./.	1/1:4,0:4:3.01:51,3,0	0/1:9,0:8:44.48:44,0,87	0/1:9,0:8:0.86:1,0,135	0/0:9,0:7:6.10:0,6,77	0/0:9,2:11:14.91:0,15,120	0/0:6,0:5:3:0,3,25	./.	0/0:1,2:2:2.94:0,3,18	./.	0/0:12,0:12:36.12:0,36,972	0/1:11,1:10:86.41:86,0,214	0/1:18,3:20:99:196,0,240	0/1:15,0:13:99:164,0,149
chr10	12483151	.	G	GATAT	596.60	PASS	AB=0.950;AC=20;AF=0.417;AN=48;BaseQRankSum=3.834;DP=453;FS=1.365;HRun=0;HaplotypeScore=110.8275;InbreedingCoeff=-0.1114;MQ=93.41;MQ0=23;MQRankSum=-0.146;QD=1.69;ReadPosRankSum=-2.346;VQSLOD=1.6713;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:27.08:0,27,502	./.	0/1:74,0:39:91.23:91,0,120	0/1:124,0:49:39.75:40,0,159	0/0:12,0:12:3.90:0,4,50	0/1:19,0:18:8.98:9,0,98	0/0:8,0:7:12.43:0,12,115	0/1:35,0:23:32.20:32,0,315	1/1:5,0:5:0.47:1,0,0	1/1:5,0:5:2.99:77,3,0	0/1:14,1:14:12.04:58,0,12	1/1:3,0:3:3.01:34,3,0	0/1:4,0:4:17.33:33,0,17	0/0:1,0:1:1.82:0,2,5	./.	1/1:7,0:7:2.97:21,3,0	0/1:7,2:8:21.11:21,0,56	0/0:10,0:9:3.89:0,4,44	0/0:9,0:7:14.03:0,14,114	0/0:11,0:11:14.88:0,15,124	0/0:6,0:6:3:0,3,29	./.	1/1:3,0:2:3:25,3,0	./.	0/0:12,0:12:36.12:0,36,706	0/1:11,0:10:31.14:31,0,84	0/1:21,0:20:99:133,0,102	0/1:10,5:13:99:132,0,119
chr10	12483167	.	G	GAGATAT	666.61	PASS	AB=1.000;AC=12;AF=0.231;AN=52;BaseQRankSum=-1.122;DP=452;FS=22.286;HRun=0;HaplotypeScore=117.6936;InbreedingCoeff=0.5120;MQ=84.78;MQ0=33;MQRankSum=-4.106;QD=8.66;ReadPosRankSum=-4.077;VQSLOD=-0.3338;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:30.84:0,31,690	0/1:1,0:1:0:0,0,0	0/0:75,0:28:4.75:0,5,107	0/0:140,0:46:41.34:0,41,408	0/0:11,0:11:9.03:0,9,203	0/0:18,0:17:18.05:0,18,369	0/0:7,0:6:6.15:0,6,237	1/1:28,0:14:18.26:300,18,0	0/0:7,0:7:2.80:0,3,68	0/0:7,0:6:14.56:0,15,192	0/0:14,0:12:14.79:0,15,335	0/1:6,0:6:0.11:0,0,1	0/0:3,0:3:6.02:0,6,136	0/0:5,0:4:2.39:0,2,67	0/1:5,0:5:0:0,0,0	0/1:6,0:6:0:0,0,0	0/0:8,0:8:6.33:0,6,137	0/0:9,0:9:12.03:0,12,273	1/1:5,2:7:10.85:254,11,0	1/1:8,2:11:12.04:223,12,0	./.	0/1:1,0:1:0:0,0,0	0/0:3,0:2:3.01:0,3,67	./.	0/0:11,0:11:27.09:0,27,582	0/0:9,0:8:17.99:0,18,376	0/0:15,0:15:25.60:0,26,544	0/1:12,0:12:18.53:19,0,237
chr10	12483231	.	T	TATAG	6078.91	PASS	AB=0.676;AC=45;AF=0.804;AN=56;BaseQRankSum=-0.315;DP=457;FS=4.413;HRun=0;HaplotypeScore=119.2545;InbreedingCoeff=0.5005;MQ=70.95;MQ0=21;MQRankSum=-1.227;QD=16.93;ReadPosRankSum=3.581;VQSLOD=4.4228;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:35:35:0,35,596	1/1:1,3:4:5.69:151,6,0	0/0:48,0:16:14.13:0,14,262	0/1:96,0:32:16.19:16,0,253	1/1:7,9:16:30.08:702,30,0	1/1:5,16:21:18.06:453,18,0	1/1:1,0:1:3.01:75,3,0	1/1:36,0:24:7.86:85,8,0	1/1:1,7:10:3.01:76,3,0	1/1:7,5:12:27.04:584,27,0	1/1:4,5:8:8.96:175,9,0	0/1:1,8:9:0:0,0,0	1/1:4,4:8:9.03:226,9,0	0/1:0,5:5:0:0,0,0	1/1:0,8:8:3.01:76,3,0	1/1:3,8:11:6.02:150,6,0	1/1:7,6:13:12.04:300,12,0	1/1:6,5:11:9.03:226,9,0	1/1:7,0:15:24.55:481,25,0	1/1:4,0:6:3.01:59,3,0	1/1:5,0:12:12.04:235,12,0	0/0:1,1:2:0:0,0,0	1/1:0,5:5:6.02:151,6,0	1/1:0,4:4:2.68:75,3,0	0/0:13,0:13:32.90:0,33,562	1/1:5,8:12:21.07:528,21,0	1/1:6,5:11:21.04:400,21,0	1/1:8,10:17:39.13:854,39,0
chr10	12483281	.	TAGATG	T	282.37	PASS	AB=0.894;AC=5;AF=0.089;AN=56;BaseQRankSum=2.060;DP=384;FS=1.252;HRun=0;HaplotypeScore=135.0082;InbreedingCoeff=0.1090;MQ=74.16;MQ0=13;MQRankSum=-2.512;QD=4.48;ReadPosRankSum=-1.837;VQSLOD=2.1393;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:11.73:0,12,897	0/0:7,0:7:12.04:0,12,375	0/0:24,0:10:16.76:0,17,304	0/0:44,0:20:22.22:0,22,235	0/0:12,0:12:30.10:0,30,802	0/0:11,8:19:8.70:0,9,205	0/1:4,2:5:42.93:61,0,43	0/1:38,3:23:99:245,0,1345	0/0:13,0:13:17.68:0,18,468	0/0:22,0:21:63.22:0,63,1899	0/0:6,0:6:9.03:0,9,283	0/0:6,0:6:6.02:0,6,193	0/0:9,0:9:17.69:0,18,471	0/0:9,0:9:20.77:0,21,553	0/0:11,0:11:14.67:0,15,481	0/0:8,0:8:12.03:0,12,283	0/0:11,0:11:21.07:0,21,616	0/0:12,0:12:9.24:0,9,471	0/1:9,0:7:45.92:46,0,251	0/0:5,5:10:6.02:0,6,194	1/1:6,1:6:3.01:42,3,0	0/0:1,0:1:3.01:0,3,97	0/0:6,0:6:8.73:0,9,265	0/0:6,0:6:6.02:0,6,183	0/0:11,0:11:30.10:0,30,896	0/0:11,0:10:27.09:0,27,821	0/0:11,0:10:30.10:0,30,836	0/0:16,0:16:48.16:0,48,1397
chr10	12483315	.	A	ATATAGATATAGATATAGG	2866.37	PASS	AB=0.986;AC=11;AF=0.196;AN=56;BaseQRankSum=-4.965;DP=357;FS=0.000;HRun=0;HaplotypeScore=188.8613;InbreedingCoeff=0.6549;MQ=75.86;MQ0=5;MQRankSum=-2.685;QD=25.14;ReadPosRankSum=-3.203;VQSLOD=2.2401;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:23.80:0,24,744	0/0:6,0:6:14.26:0,14,582	0/0:14,0:12:22.32:0,22,242	0/1:22,0:17:2.25:2,0,223	0/0:16,0:16:33.03:0,33,673	0/0:20,0:20:20.55:0,21,170	0/1:7,0:6:64.96:96,0,65	1/1:35,0:23:63.14:1216,63,0	0/0:12,0:12:27.04:0,27,703	0/0:22,0:22:27.14:0,27,1753	0/0:9,0:9:15.04:0,15,316	0/0:9,0:9:12.01:0,12,277	0/0:8,0:8:14.68:0,15,551	0/0:9,0:9:27.07:0,27,917	0/0:11,0:11:18.05:0,18,752	0/0:6,0:6:15.04:0,15,416	0/0:10,0:10:14.81:0,15,439	0/1:12,0:12:3.67:4,0,525	1/1:5,8:17:45.08:1365,45,0	1/1:10,0:10:8.97:93,9,0	1/1:8,0:7:15.02:250,15,0	0/0:7,0:7:15.02:0,15,194	0/0:7,0:7:17.95:0,18,282	0/0:7,0:7:8.99:0,9,290	0/0:8,0:8:24.05:0,24,829	0/0:11,0:11:33.09:0,33,855	0/0:13,0:12:36.02:0,36,856	0/0:12,0:12:9.89:0,10,1186
chr10	12483498	.	T	TTC	5664.62	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=3.646;DP=399;FS=1.062;HRun=0;HaplotypeScore=65.0996;InbreedingCoeff=0.8463;MQ=60.66;MQ0=4;MQRankSum=-2.055;QD=17.06;ReadPosRankSum=1.581;VQSLOD=4.2522;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:78.18:0,78,1072	1/1:2,0:9:0.34:87,0,0	0/0:9,0:6:18.06:0,18,244	0/0:11,0:8:21.93:0,22,280	1/1:1,0:26:52.20:300,52,0	1/1:0,0:17:40.09:211,40,0	1/1:0,0:6:14.51:78,15,0	1/1:1,20:22:65.93:900,66,0	1/1:2,0:20:19.68:206,20,0	1/1:0,0:18:30.35:286,30,0	1/1:4,0:19:41.92:251,42,0	1/1:0,0:8:20.32:110,20,0	1/1:1,0:9:11.61:63,12,0	1/1:0,0:13:37.73:204,38,0	1/1:1,0:12:29.03:156,29,0	1/1:1,0:12:6.60:118,7,0	1/1:1,0:16:32.74:168,33,0	1/1:1,0:10:23.25:131,23,0	1/1:1,14:15:45.07:695,45,0	1/1:1,8:10:23.91:360,24,0	1/1:0,9:9:18.06:335,18,0	1/1:0,0:6:17.44:97,17,0	1/1:0,0:10:17.39:94,17,0	1/1:4,0:12:3.47:125,3,0	0/0:19,0:19:33.49:0,33,707	1/1:3,0:13:31.39:205,31,0	1/1:0,0:13:34.78:187,35,0	1/1:0,0:19:55.04:296,55,0
chr10	12487359	.	AT	A	11387.83	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=12.661;DP=559;FS=1.168;HRun=3;HaplotypeScore=53.8142;InbreedingCoeff=0.9330;MQ=53.01;MQ0=31;MQRankSum=2.088;QD=32.17;ReadPosRankSum=1.285;VQSLOD=5.0012;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:30:84.19:0,84,1147	1/1:0,8:8:21.07:260,21,0	0/0:11,0:1:3.01:0,3,43	0/0:12,0:2:2.99:0,3,23	1/1:2,30:32:81.25:999,81,0	0/0:15,0:15:42.13:0,42,586	0/0:13,0:13:33.11:0,33,475	0/0:28,0:9:27.09:0,27,386	1/1:1,19:20:51.16:632,51,0	1/1:0,26:25:75.19:912,75,0	1/1:0,18:18:54.17:666,54,0	1/1:2,9:10:18.05:218,18,0	1/1:0,16:16:36.11:446,36,0	1/1:2,9:9:24.08:297,24,0	1/1:1,17:17:45.14:558,45,0	1/1:0,12:12:36.11:446,36,0	1/1:2,30:32:59.32:979,59,0	1/1:1,15:16:42.13:521,42,0	0/0:23,0:16:42.14:0,42,604	0/0:37,0:37:99:0,105,1483	0/0:20,0:20:60.17:0,60,826	1/1:0,29:29:78.25:967,78,0	1/1:0,34:34:87.27:1075,87,0	1/1:1,16:17:7.65:517,8,0	0/0:15,0:14:42.12:0,42,584	1/1:0,23:23:69.22:854,69,0	1/1:1,22:23:62.70:780,63,0	1/1:0,8:8:21.07:260,21,0
chr10	12491114	.	G	GT	14867.49	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-11.792;DP=571;FS=2.678;HRun=5;HaplotypeScore=57.0166;InbreedingCoeff=0.9923;MQ=66.86;MQ0=3;MQRankSum=0.997;QD=31.37;ReadPosRankSum=3.755;VQSLOD=5.5017;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:54.11:0,54,569	1/1:0,7:7:18.06:237,18,0	0/0:26,0:25:69.16:0,69,733	0/0:28,0:26:60.16:0,60,619	1/1:7,34:41:99:1300,99,0	1/1:1,18:19:42.14:553,42,0	1/1:2,9:11:21.07:276,21,0	1/1:5,20:23:60.15:770,60,0	1/1:0,15:15:45.15:592,45,0	1/1:4,15:19:45.13:576,45,0	1/1:6,33:39:87.13:1083,87,0	1/1:0,12:12:33.11:434,33,0	1/1:1,11:12:30.10:395,30,0	1/1:0,8:8:24.08:316,24,0	1/1:0,12:12:33.11:434,33,0	1/1:0,7:7:18.06:237,18,0	1/1:2,24:26:63.20:829,63,0	1/1:2,16:18:42.14:553,42,0	1/1:2,18:19:54.16:692,54,0	1/1:5,28:33:81.17:1025,81,0	1/1:1,12:13:30.10:395,30,0	1/1:4,26:31:70.48:925,70,0	1/1:4,24:28:55.08:713,55,0	1/1:0,19:19:45.15:592,45,0	0/0:22,0:22:60.09:0,60,618	1/1:4,15:19:45.12:562,45,0	1/1:0,30:30:84.27:1105,84,0	1/1:3,7:10:21.07:275,21,0
chr10	12492266	.	CT	C	1870.27	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=9.462;DP=514;FS=9.184;HRun=8;HaplotypeScore=47.5655;InbreedingCoeff=0.8870;MQ=66.93;MQ0=1;MQRankSum=-0.856;QD=21.01;ReadPosRankSum=-0.667;VQSLOD=3.0469;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:33:81.25:0,81,975	0/0:13,0:13:33.10:0,33,397	0/0:14,0:10:21.05:0,21,243	0/0:11,0:11:27.08:0,27,318	0/0:29,0:29:75.21:0,75,884	0/0:27,0:26:78.21:0,78,919	0/0:10,0:10:24.07:0,24,290	1/1:4,23:25:63.10:608,63,0	0/0:14,0:14:39.12:0,39,471	0/0:25,0:25:75.23:0,75,906	0/0:31,0:31:87.27:0,87,1051	0/0:8,0:8:18.05:0,18,216	0/0:10,0:10:30.09:0,30,362	0/0:14,0:14:42.13:0,42,506	0/0:14,0:14:42.13:0,42,507	0/1:8,0:8:4.77:5,0,230	0/0:14,0:14:39.12:0,39,471	0/0:10,0:10:30.09:0,30,358	1/1:1,13:14:39.06:377,39,0	1/1:2,25:27:72.11:695,72,0	1/1:1,12:13:36.06:348,36,0	0/0:17,0:17:48.15:0,48,579	0/0:36,0:36:99:0,108,1303	0/0:14,0:14:33.10:0,33,399	0/0:24,0:24:72.21:0,72,859	0/0:32,0:32:96.29:0,96,1160	0/0:15,0:15:36.11:0,36,434	0/0:9,0:9:12.04:0,12,145
chr10	12493809	.	AT	A	9220.93	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=1.331;DP=561;FS=15.837;HRun=7;HaplotypeScore=63.5156;InbreedingCoeff=0.9499;MQ=61.82;MQ0=2;MQRankSum=3.427;QD=26.88;ReadPosRankSum=4.512;VQSLOD=3.8441;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:74.96:0,75,895	1/1:0,7:7:18.04:184,18,0	0/0:13,3:12:2.41:0,2,313	0/0:19,0:18:44.90:0,45,488	1/1:0,37:37:99:1058,105,0	0/0:23,0:23:66.21:0,66,830	0/0:13,0:13:39.11:0,39,477	0/0:25,0:24:54.14:0,54,633	1/1:0,28:28:81.18:826,81,0	1/1:3,27:30:81.16:824,81,0	1/1:3,21:24:57.12:580,57,0	1/1:0,6:6:18.04:184,18,0	1/1:1,10:11:30.07:306,30,0	1/1:3,15:18:39.08:398,39,0	1/1:1,19:20:45.10:459,45,0	1/1:0,7:7:18.04:184,18,0	1/1:2,27:29:75.17:765,75,0	1/1:3,12:15:33.06:337,33,0	0/0:22,0:18:48.14:0,48,582	0/0:27,0:27:78.24:0,78,970	0/0:29,0:29:84.24:0,84,1031	1/1:0,24:24:69.15:703,69,0	1/1:1,24:25:66.15:673,66,0	1/1:1,6:7:15.03:153,15,0	0/0:18,0:18:51.16:0,51,642	1/1:0,18:18:54.12:548,54,0	1/1:1,34:35:96.22:979,96,0	1/1:0,2:2:6.01:61,6,0
chr10	12495023	.	TGGG	T	9650.44	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-1.855;DP=496;FS=3.471;HRun=11;HaplotypeScore=97.1722;InbreedingCoeff=0.9837;MQ=48.15;MQ0=16;MQRankSum=-6.522;QD=31.03;ReadPosRankSum=6.411;VQSLOD=4.1076;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:35:66.12:0,66,1089	1/1:0,9:9:24.08:315,24,0	0/0:18,0:7:15.03:0,15,236	0/0:15,0:4:8.90:0,9,128	1/1:2,21:24:51.09:648,51,0	0/0:3,0:18:35.39:0,35,296	0/0:1,0:9:22.17:0,22,164	0/0:10,0:13:20.94:0,21,170	1/1:1,18:19:54.18:709,54,0	1/1:3,9:12:24.07:315,24,0	1/1:5,24:27:63.18:828,63,0	1/1:1,19:19:51.16:670,51,0	1/1:1,7:8:21.06:276,21,0	1/1:0,13:14:36.12:473,36,0	1/1:3,14:17:42.12:552,42,0	1/1:0,14:15:39.12:512,39,0	1/1:3,19:22:54.12:690,54,0	1/1:6,11:16:30.08:394,30,0	0/0:11,0:12:20.93:0,21,163	0/0:6,0:11:23.48:0,23,231	0/0:9,0:27:36.90:0,37,290	1/1:1,27:26:72.23:941,72,0	1/1:3,9:12:30.09:394,30,0	1/1:1,13:13:33.11:433,33,0	0/0:10,0:12:24.06:0,24,348	1/1:2,17:17:42.13:552,42,0	1/1:6,19:24:57.08:710,57,0	1/1:0,6:6:18.06:237,18,0
chr10	12495088	.	GCTCTGGTTGTAT	G	19959.09	PASS	AB=0.661;AC=23;AF=0.442;AN=52;BaseQRankSum=10.251;DP=616;FS=13.607;HRun=0;HaplotypeScore=240.3364;InbreedingCoeff=-0.0233;MQ=38.80;MQ0=36;MQRankSum=-12.670;QD=56.54;ReadPosRankSum=1.206;VQSLOD=2.8435;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:47:99:0,132,7881	1/1:2,4:6:9.03:336,9,0	./.	./.	0/1:8,15:23:99:943,0,133	0/0:20,0:19:57.20:0,57,3401	0/0:22,0:18:54.19:0,54,3123	0/0:29,0:22:63.21:0,63,3198	0/1:9,22:27:99:2174,0,100	1/1:1,25:26:78.25:2778,78,0	1/1:7,21:27:45.15:1605,45,0	0/1:10,9:18:99:894,0,451	0/1:7,12:17:99:1316,0,121	0/1:11,7:15:99:698,0,619	0/1:7,11:17:99:1176,0,287	0/1:9,13:19:99:1297,0,443	0/1:11,3:14:99:113,0,712	0/1:7,8:15:99:862,0,312	0/0:24,0:17:51.18:0,51,2874	0/0:29,0:27:72.25:0,72,4340	0/0:28,0:25:63.22:0,63,3639	1/1:11,13:21:30.09:1031,30,0	0/1:8,15:21:99:1342,0,121	0/1:8,7:15:99:312,0,525	0/0:17,0:17:48.16:0,48,2895	0/1:6,9:12:99:868,0,132	1/1:5,20:24:48.16:1790,48,0	0/1:8,4:12:99:426,0,143
chr10	12495260	.	C	CTA	18875.37	PASS	AB=0.550;AC=34;AF=0.607;AN=56;BaseQRankSum=-13.602;DP=634;FS=0.323;HRun=0;HaplotypeScore=74.7516;InbreedingCoeff=0.8517;MQ=54.52;MQ0=22;MQRankSum=0.235;QD=48.52;ReadPosRankSum=5.863;VQSLOD=5.8600;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,108,1573	1/1:2,8:10:24.08:464,24,0	0/0:26,0:8:15.04:0,15,219	0/0:30,0:18:50.82:0,51,685	1/1:1,23:24:63.22:1209,63,0	0/0:26,0:23:69.23:0,69,1057	0/0:17,0:17:51.17:0,51,761	0/0:18,0:17:48.15:0,48,715	1/1:3,35:36:96.33:1845,96,0	1/1:2,30:32:96.33:1849,96,0	1/1:1,22:22:48.16:927,48,0	0/1:3,19:21:37.76:871,0,38	1/1:2,17:19:2.09:822,2,0	0/1:4,14:16:0.72:765,0,1	1/1:2,23:25:20.35:1164,20,0	1/1:2,23:25:23.36:1221,23,0	1/1:3,12:15:42.10:763,42,0	1/1:3,16:19:49.41:906,49,0	0/0:23,0:16:45.13:0,45,645	0/0:21,0:20:57.19:0,57,868	0/0:25,0:25:75.17:0,75,1073	1/1:1,28:29:75.26:1448,75,0	1/1:0,19:19:54.19:1040,54,0	1/1:0,23:23:54.19:1043,54,0	0/0:22,0:19:51.16:0,51,761	1/1:0,22:22:66.23:1267,66,0	1/1:0,16:17:45.15:866,45,0	1/1:1,7:8:21.07:406,21,0
chr10	12495530	.	ATGTACCACATTTTC	A	2073.41	PASS	AB=0.533;AC=7;AF=0.130;AN=54;BaseQRankSum=8.329;DP=603;FS=9.435;HRun=0;HaplotypeScore=184.5431;InbreedingCoeff=0.7067;MQ=53.57;MQ0=28;MQRankSum=-8.261;QD=37.03;ReadPosRankSum=-2.739;VQSLOD=1.9337;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:35:75.26:0,75,4840	0/0:12,0:12:33.10:0,33,1952	./.	0/0:26,0:2:3.01:0,3,75	0/0:25,0:25:66.23:0,66,4448	0/0:29,0:28:75.22:0,75,4777	0/0:16,0:14:27.09:0,27,1432	1/1:7,19:21:42.08:880,42,0	0/0:31,0:31:80.91:0,81,5248	0/0:31,0:31:87.29:0,87,5450	0/0:23,0:23:51.38:0,51,3492	0/0:22,0:21:54.19:0,54,3308	0/0:23,0:23:57.18:0,57,3459	0/0:18,0:18:48.16:0,48,2996	0/0:20,0:20:57.17:0,57,3483	0/0:7,0:7:21.07:0,21,1390	0/0:37,0:31:63.22:0,63,4181	0/0:13,0:12:36.12:0,36,2119	1/1:3,8:9:17.82:474,18,0	0/1:2,14:14:99:732,0,103	1/1:0,3:3:3.01:123,3,0	0/0:36,0:36:96.33:0,96,6288	0/0:24,0:24:66.23:0,66,4129	0/0:7,0:7:12.04:0,12,755	0/0:15,0:15:39.13:0,39,2489	0/0:29,0:29:84.29:0,84,5792	0/0:27,0:27:69.22:0,69,4387	0/0:6,0:5:12.04:0,12,738
chr10	12496032	.	G	GT	12803.58	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-11.545;DP=554;FS=0.905;HRun=8;HaplotypeScore=49.9334;InbreedingCoeff=0.9430;MQ=60.68;MQ0=1;MQRankSum=3.491;QD=28.71;ReadPosRankSum=2.499;VQSLOD=5.1582;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:63.02:0,63,576	1/1:2,8:10:21.06:242,21,0	0/0:16,0:13:30.01:0,30,272	0/0:13,0:12:21.01:0,21,192	1/1:1,22:23:51.11:574,51,0	0/0:17,0:17:42.01:0,42,384	0/0:22,0:21:54:0,54,489	1/1:1,28:28:54.24:853,54,0	1/1:2,18:20:51.15:589,51,0	1/1:2,29:31:90.27:1038,90,0	1/1:2,21:23:66.19:754,66,0	1/1:3,15:19:23.50:491,23,0	1/1:3,16:19:42.12:485,42,0	1/1:0,8:8:24.07:277,24,0	1/1:3,15:18:45.13:519,45,0	1/1:0,14:14:39.12:450,39,0	1/1:3,18:21:48.14:554,48,0	1/1:3,20:22:54.16:623,54,0	1/1:9,25:33:75.20:850,75,0	1/1:2,30:32:87.22:989,87,0	1/1:2,9:11:3.99:254,4,0	1/1:1,23:24:66.20:762,66,0	1/1:2,19:21:57.17:658,57,0	1/1:1,5:6:15.04:173,15,0	0/0:15,0:15:36.02:0,36,329	1/1:1,18:19:54.16:622,54,0	1/1:1,24:25:63.19:727,63,0	1/1:6,10:16:5.66:319,6,0
chr10	12497234	.	TG	T	930.35	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.037;DP=520;FS=1.568;HRun=2;HaplotypeScore=47.1091;InbreedingCoeff=0.9869;MQ=56.04;MQ0=23;MQRankSum=3.550;QD=30.01;ReadPosRankSum=0.090;VQSLOD=3.0061;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:63.20:0,63,921	0/0:14,0:14:42.14:0,42,629	0/0:20,0:6:18.06:0,18,243	0/0:32,0:14:17.13:0,17,376	0/0:22,0:22:63.20:0,63,922	1/1:1,23:23:60.20:779,60,0	1/1:0,7:7:21.07:272,21,0	0/0:25,0:21:60.18:0,60,844	0/0:14,0:14:42.12:0,42,590	0/0:26,0:21:60.20:0,60,885	0/0:25,0:25:72.22:0,72,1039	0/0:14,0:14:42.14:0,42,629	0/0:11,0:11:33.11:0,33,494	0/0:14,0:14:39.13:0,39,584	0/0:11,0:11:33.10:0,33,474	0/0:12,0:11:30.06:0,30,424	0/0:13,0:13:36.12:0,36,539	0/0:21,0:20:60.20:0,60,893	0/0:19,0:12:36.12:0,36,539	0/0:30,0:27:78.26:0,78,1168	0/0:17,0:16:48.16:0,48,719	0/0:17,0:15:39.12:0,39,563	0/0:24,0:24:72.23:0,72,1054	0/0:8,0:8:24.08:0,24,360	0/0:22,0:22:63.16:0,63,882	0/0:21,0:21:60.20:0,60,899	0/0:21,0:19:57.17:0,57,815	0/0:12,0:12:36.12:0,36,539
chr10	12497567	.	AT	A	9034.11	PASS	AB=0.561;AC=34;AF=0.607;AN=56;BaseQRankSum=11.895;DP=568;FS=3.933;HRun=7;HaplotypeScore=61.7005;InbreedingCoeff=0.8624;MQ=64.05;MQ0=2;MQRankSum=1.481;QD=25.38;ReadPosRankSum=4.740;VQSLOD=5.4380;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:69.22:0,69,864	1/1:0,13:13:33.07:337,33,0	0/0:20,1:20:18.39:0,18,488	0/0:19,0:18:48.06:0,48,554	1/1:1,27:28:75.16:765,75,0	0/0:17,0:17:44.93:0,45,541	0/0:7,0:7:17.73:0,18,200	0/0:32,0:32:90.28:0,90,1121	1/1:0,20:20:54.12:551,54,0	1/1:2,26:28:78.16:790,78,0	1/1:1,19:20:57.13:580,57,0	1/1:3,22:25:63.14:643,63,0	1/1:1,20:21:51.11:520,51,0	1/1:0,17:17:48.11:490,48,0	1/1:3,8:11:7.63:226,8,0	1/1:0,7:7:18.04:184,18,0	1/1:4,19:23:11.43:417,11,0	0/1:3,11:14:1.56:270,0,2	0/0:28,0:28:78.25:0,78,981	0/0:26,0:26:69.19:0,69,842	0/0:17,0:17:48.15:0,48,604	1/1:3,21:24:63.13:642,63,0	1/1:1,23:24:69.16:704,69,0	0/1:2,7:9:16.78:162,0,17	0/0:19,0:19:56.83:0,57,675	1/1:6,29:35:87.19:888,87,0	1/1:4,24:28:43.30:592,43,0	1/1:0,9:9:27.06:275,27,0
chr10	12501666	.	GTAGTTGTCTCCTC	G	22471.86	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=15.979;DP=509;FS=1.161;HRun=0;HaplotypeScore=178.6081;InbreedingCoeff=0.9794;MQ=46.82;MQ0=26;MQRankSum=-15.207;QD=87.10;ReadPosRankSum=4.721;VQSLOD=4.4788;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,108,6845	1/1:0,15:15:33.11:1350,33,0	0/0:18,0:9:27.09:0,27,1611	0/0:24,0:7:21.07:0,21,1189	1/1:2,18:20:45.15:1688,45,0	0/0:13,0:13:39.13:0,39,2458	0/0:15,0:15:45.15:0,45,2672	0/0:23,0:23:66.23:0,66,4204	1/1:2,11:13:27.09:1105,27,0	1/1:0,16:16:45.13:1591,45,0	1/1:0,8:9:27.09:1105,27,0	1/1:1,9:10:21.07:859,21,0	1/1:0,13:14:30.10:1227,30,0	1/1:0,16:16:42.14:1718,42,0	1/1:0,13:13:30.10:1227,30,0	1/1:0,12:12:27.09:1104,27,0	1/1:0,18:18:30.10:1065,30,0	1/1:7,3:10:21.07:554,21,0	0/0:30,0:26:75.26:0,75,4403	0/0:29,0:28:84.29:0,84,5347	0/0:44,0:43:99:0,129,7762	1/1:0,17:17:33.11:1350,33,0	1/1:1,13:14:36.04:1329,36,0	1/1:0,15:16:15.01:614,15,0	0/0:16,0:16:48.16:0,48,2812	1/1:0,15:14:39.13:1545,39,0	1/1:0,28:28:72.25:2946,72,0	1/1:2,0:2:6.02:96,6,0
chr10	12501927	.	T	TC	18155.83	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-10.561;DP=534;FS=0.877;HRun=0;HaplotypeScore=49.4516;InbreedingCoeff=0.9958;MQ=73.45;MQ0=0;MQRankSum=-5.749;QD=41.83;ReadPosRankSum=3.151;VQSLOD=5.2633;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,138,1889	1/1:0,10:10:30.10:479,30,0	0/0:16,0:16:42.13:0,42,558	0/0:24,0:24:59.07:0,59,697	1/1:0,25:25:57.19:910,57,0	1/1:0,20:20:51.17:815,51,0	1/1:0,20:19:51.17:815,51,0	1/1:1,33:34:96.30:1483,96,0	1/1:1,18:19:51.17:815,51,0	1/1:1,22:23:63.20:973,63,0	1/1:0,6:6:18.06:288,18,0	1/1:0,11:11:27.09:431,27,0	1/1:0,12:12:33.11:527,33,0	1/1:0,16:16:39.13:623,39,0	1/1:0,14:14:39.13:623,39,0	1/1:1,11:12:30.10:479,30,0	1/1:1,22:23:60.20:959,60,0	1/1:0,18:17:42.14:666,42,0	1/1:1,22:23:60.18:934,60,0	1/1:0,22:22:57.06:851,57,0	1/1:0,15:15:39.13:623,39,0	1/1:0,21:21:60.20:956,60,0	1/1:0,13:13:33.11:527,33,0	1/1:0,21:21:63.21:1007,63,0	0/0:14,0:14:42.14:0,42,587	1/1:1,21:22:60.19:937,60,0	1/1:1,26:27:69.24:1102,69,0	1/1:0,7:7:21.07:336,21,0
chr10	12502639	.	C	CGAGCGAGCGAGT	9506.61	PASS	AB=1.000;AC=37;AF=0.661;AN=56;BaseQRankSum=0.716;DP=576;FS=13.820;HRun=0;HaplotypeScore=192.5000;InbreedingCoeff=0.6310;MQ=67.62;MQ0=9;MQRankSum=-6.643;QD=25.49;ReadPosRankSum=0.619;VQSLOD=3.3112;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,111,2953	1/1:10,0:10:14.95:299,15,0	0/0:25,0:19:15.43:0,15,231	0/0:39,0:24:39.01:0,39,480	1/1:22,0:22:9.03:397,9,0	0/1:14,0:14:21.98:70,0,22	0/1:19,0:19:18.13:117,0,18	0/0:15,0:15:37.38:0,37,652	1/1:3,14:23:5.90:276,6,0	1/1:24,0:23:49.43:1167,49,0	1/1:25,0:24:6.68:135,7,0	1/1:4,11:21:9.50:486,10,0	1/1:8,2:9:14.15:590,14,0	1/1:2,7:12:3.01:175,3,0	1/1:15,0:15:9.02:348,9,0	1/1:1,8:12:21.11:1245,21,0	1/1:4,15:24:11.98:402,12,0	0/1:9,0:9:12.66:247,0,13	0/0:19,0:18:21.86:0,22,507	0/0:22,0:22:29.44:0,29,614	0/0:23,0:23:27.56:0,28,606	1/1:5,14:24:8.45:525,8,0	1/1:4,17:24:3.01:129,3,0	1/1:9,9:20:5.67:357,6,0	0/0:15,0:15:39.09:0,39,965	1/1:15,0:15:23.29:477,23,0	1/1:36,0:36:38.81:1501,39,0	1/1:12,0:12:23.83:565,24,0
chr10	12502647	.	C	CGAGTGAGCGAGCGA	7797.44	PASS	AB=0.965;AC=27;AF=0.482;AN=56;BaseQRankSum=1.012;DP=593;FS=22.581;HRun=0;HaplotypeScore=213.5772;InbreedingCoeff=0.0106;MQ=64.86;MQ0=11;MQRankSum=-6.887;QD=21.25;ReadPosRankSum=5.066;VQSLOD=2.2367;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:49:89.46:0,89,3466	0/1:12,0:12:77.32:110,0,77	0/0:22,0:14:15.56:0,16,231	0/0:41,0:20:39.06:0,39,470	1/1:24,0:24:9.03:398,9,0	0/1:18,0:18:59.26:59,0,155	0/1:22,0:23:99:138,0,108	0/1:22,0:21:56.39:56,0,567	0/1:21,0:21:32.06:228,0,32	1/1:22,0:21:23.48:1028,23,0	0/1:25,0:24:32.35:93,0,32	0/1:19,0:19:21.53:391,0,22	0/1:9,0:8:18.35:365,0,18	1/1:11,0:11:3.01:142,3,0	0/1:4,13:22:0.46:396,0,0	1/1:11,0:11:21.39:1010,21,0	1/1:22,0:22:14.80:468,15,0	0/1:7,0:7:45.79:204,0,46	0/0:14,0:19:13.41:0,13,503	0/0:14,0:27:29.85:0,30,608	0/0:15,0:29:27.98:0,28,608	1/1:19,0:19:7.71:453,8,0	0/1:24,0:24:47.15:88,0,47	0/0:22,0:20:3.95:0,4,36	0/0:17,0:17:42.10:0,42,1055	0/1:13,0:13:68.04:333,0,68	1/1:31,0:32:2.89:1387,3,0	0/1:10,0:10:21.61:450,0,22
chr10	12502649	.	A	AGTGAGCGAGC	7993.42	PASS	AB=0.935;AC=26;AF=0.464;AN=56;BaseQRankSum=2.532;DP=593;FS=40.122;HRun=0;HaplotypeScore=184.5422;InbreedingCoeff=0.1165;MQ=63.86;MQ0=12;MQRankSum=-6.072;QD=23.79;ReadPosRankSum=6.678;VQSLOD=1.9932;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,115,3279	0/1:12,0:12:99:110,0,124	0/0:21,0:14:15.17:0,15,231	0/0:42,0:21:41.12:0,41,519	1/1:0,20:25:9.03:453,9,0	0/1:17,0:18:63.57:64,0,124	0/1:20,0:21:94.80:133,0,95	0/0:23,0:21:49.66:0,50,797	0/1:17,0:19:79:229,0,79	1/1:16,0:21:52.25:1151,52,0	1/1:6,0:23:4.28:171,4,0	0/1:19,1:20:30.53:415,0,31	0/1:8,0:8:42.23:336,0,42	0/1:10,0:10:18.91:123,0,19	0/1:20,0:20:12.10:259,0,12	1/1:12,0:12:21.25:924,21,0	0/1:20,1:20:1.96:460,0,2	0/1:7,0:7:97.47:191,0,97	0/0:22,0:22:37.94:0,38,624	0/0:28,0:28:30.39:0,30,598	0/0:30,0:30:30.56:0,31,630	1/1:18,0:18:11.15:413,11,0	0/1:24,0:24:69.49:69,0,122	0/0:21,0:20:6.48:0,6,73	0/0:16,0:16:48.10:0,48,1044	0/1:5,0:14:17.61:363,0,18	1/1:23,0:30:62.61:1621,63,0	1/1:9,0:10:8.92:510,9,0
chr10	12502651	.	A	AGCGAGC	2813.55	PASS	AB=0.968;AC=18;AF=0.321;AN=56;BaseQRankSum=8.920;DP=589;FS=25.343;HRun=0;HaplotypeScore=166.0689;InbreedingCoeff=-0.2771;MQ=61.71;MQ0=13;MQRankSum=-4.272;QD=9.11;ReadPosRankSum=7.438;VQSLOD=0.9543;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,147,2540	0/0:12,0:12:0.48:0,0,194	0/0:23,0:14:18.64:0,19,178	0/0:42,0:18:21.24:0,21,361	0/1:24,0:24:8.82:145,0,9	0/1:17,0:18:19.62:198,0,20	0/1:19,0:20:29.28:124,0,29	0/0:25,0:23:34.09:0,34,591	0/1:18,1:19:61.21:126,0,61	0/1:21,3:23:36.38:418,0,36	1/1:17,1:17:2.10:98,2,0	0/1:19,0:19:28.98:150,0,29	0/1:9,0:8:93.30:104,0,93	0/1:11,0:11:18.99:27,0,19	0/1:20,0:20:56.89:95,0,57	0/1:12,0:12:0.86:345,0,1	0/1:21,0:20:20.51:95,0,21	0/0:7,0:7:11.48:0,11,196	0/1:23,0:23:74.68:75,0,493	0/0:27,0:27:21.99:0,22,384	0/0:29,0:29:33.52:0,34,440	0/1:18,0:18:10.79:133,0,11	0/0:25,0:25:3.22:0,3,137	0/0:20,0:18:5.44:0,5,68	0/0:17,0:17:48.09:0,48,771	0/1:13,0:13:47.53:48,0,54	0/1:24,6:30:99:659,0,169	0/1:9,1:10:0.92:129,0,1
chr10	12503392	.	G	GACACACACACAC	147.01	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=1.592;DP=475;FS=5.055;HRun=0;HaplotypeScore=159.7236;InbreedingCoeff=0.8364;MQ=62.01;MQ0=12;MQRankSum=-1.112;QD=4.32;ReadPosRankSum=-2.123;VQSLOD=1.5437;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:24:34.96:0,35,773	0/0:12,0:12:30.07:0,30,579	0/0:30,0:23:66.10:0,66,856	0/0:23,0:16:41.25:0,41,681	0/0:22,0:22:63.19:0,63,1710	1/1:11,6:18:2.49:173,2,0	1/1:15,0:15:8.49:73,8,0	0/0:13,0:13:39.11:0,39,596	0/0:23,0:22:57.13:0,57,1107	0/0:23,0:23:65.47:0,65,884	0/0:26,0:26:57.60:0,58,1042	0/0:14,0:14:26.97:0,27,564	0/0:9,0:9:17.96:0,18,357	0/0:14,0:14:24.03:0,24,346	0/0:10,0:10:21.06:0,21,356	0/0:14,0:14:27.08:0,27,531	0/0:23,0:23:35.91:0,36,1005	0/0:12,0:12:18.84:0,19,355	0/0:11,0:10:30.06:0,30,447	0/0:16,0:14:39.07:0,39,652	0/0:17,0:17:36.09:0,36,543	0/0:20,0:20:48.14:0,48,873	0/0:18,0:17:29.95:0,30,453	0/0:18,0:18:27.09:0,27,458	0/0:12,0:11:30.10:0,30,590	0/0:12,0:12:36.10:0,36,652	0/0:12,0:12:24.01:0,24,322	0/0:12,0:12:21.05:0,21,339
chr10	12503683	.	CA	C	7813.47	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=11.162;DP=521;FS=0.000;HRun=7;HaplotypeScore=55.0530;InbreedingCoeff=0.9982;MQ=80.29;MQ0=0;MQRankSum=-2.931;QD=26.22;ReadPosRankSum=4.404;VQSLOD=5.1559;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,102,1255	1/1:0,9:9:24.05:245,24,0	0/0:23,0:22:47.27:0,47,559	0/0:25,0:24:50.30:0,50,571	1/1:0,17:17:48.02:475,48,0	0/0:22,0:22:57.18:0,57,717	0/0:16,0:16:45.14:0,45,566	0/0:25,0:25:66.20:0,66,810	1/1:2,19:21:54.12:550,54,0	1/1:4,31:35:96.14:956,96,0	1/1:4,15:19:45.10:458,45,0	1/1:1,10:11:27.06:275,27,0	1/1:1,14:15:42.10:428,42,0	1/1:0,17:17:48.11:490,48,0	1/1:0,15:15:36.08:367,36,0	1/1:0,9:9:24.05:245,24,0	1/1:0,16:16:48.11:490,48,0	1/1:1,9:10:24.05:245,24,0	0/0:21,0:21:51.16:0,51,631	0/0:18,0:18:48.14:0,48,588	0/0:21,0:21:51.15:0,51,627	1/1:3,18:21:45.10:459,45,0	1/1:2,15:17:42.09:428,42,0	1/1:1,13:14:39.09:398,39,0	0/0:14,0:14:36.09:0,36,438	1/1:4,22:26:66.11:663,66,0	1/1:2,17:19:42.10:428,42,0	1/1:0,7:7:21.05:214,21,0
chr10	12504204	.	CA	C	13997.11	PASS	AB=0.517;AC=35;AF=0.625;AN=56;BaseQRankSum=12.539;DP=600;FS=2.250;HRun=1;HaplotypeScore=69.6208;InbreedingCoeff=0.9492;MQ=70.55;MQ0=0;MQRankSum=-2.661;QD=39.32;ReadPosRankSum=4.579;VQSLOD=5.4860;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:84.26:0,84,1313	0/1:1,14:15:2.82:542,0,3	0/0:27,0:25:68.92:0,69,988	0/0:27,0:26:57.95:0,58,1045	1/1:0,25:25:75.25:1049,75,0	0/0:21,0:21:60.20:0,60,959	0/0:13,0:12:36.12:0,36,575	0/0:24,0:24:72.24:0,72,1120	1/1:0,20:20:57.15:774,57,0	1/1:0,35:35:99:1445,105,0	1/1:0,31:31:90.30:1255,90,0	1/1:1,9:10:26.68:377,27,0	1/1:0,10:10:30.10:418,30,0	1/1:0,20:20:57.19:790,57,0	1/1:0,16:16:45.15:629,45,0	1/1:0,14:14:39.13:546,39,0	1/1:1,24:25:66.22:923,66,0	1/1:0,12:12:33.11:459,33,0	0/0:29,0:29:87.30:0,87,1372	0/0:30,0:30:87.30:0,87,1381	0/0:28,0:28:78.27:0,78,1237	1/1:0,15:15:36.12:502,36,0	1/1:0,31:31:90.30:1252,90,0	1/1:0,12:12:33.11:462,33,0	0/0:14,0:13:39.13:0,39,623	1/1:0,25:25:75.14:1021,75,0	1/1:0,28:28:81.27:1133,81,0	1/1:0,12:12:30.10:420,30,0
chr10	12505775	.	T	TG	5489.02	PASS	AC=36;AF=0.692;AN=52;BaseQRankSum=-7.789;DP=649;FS=1.069;HRun=5;HaplotypeScore=68.6597;InbreedingCoeff=0.9479;MQ=44.38;MQ0=87;MQRankSum=2.031;QD=15.25;ReadPosRankSum=2.244;VQSLOD=4.1094;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:50:54.11:0,54,570	1/1:0,5:5:6.02:77,6,0	./.	./.	1/1:1,15:16:12:138,12,0	0/0:19,0:18:33.08:0,33,354	0/0:27,0:21:33.04:0,33,342	0/0:25,0:12:29.99:0,30,297	1/1:3,26:26:20.80:276,21,0	1/1:2,17:16:42.14:551,42,0	1/1:2,20:21:30.10:394,30,0	1/1:2,22:22:21.49:257,21,0	1/1:1,16:14:17.81:236,18,0	1/1:2,16:17:33.11:431,33,0	1/1:2,16:18:15.05:197,15,0	1/1:0,12:11:15.05:197,15,0	1/1:4,34:35:30.10:395,30,0	1/1:4,21:24:30.10:395,30,0	0/0:19,0:12:33.08:0,33,350	0/0:16,0:15:33.08:0,33,355	0/0:65,0:52:45.09:0,45,474	1/1:3,19:21:30.10:395,30,0	1/1:3,12:15:8.96:118,9,0	1/1:5,25:29:27.05:355,27,0	0/0:18,0:17:27.06:0,27,286	1/1:0,20:18:48.13:603,48,0	1/1:3,16:13:27.09:354,27,0	1/1:3,8:9:9.03:118,9,0
chr10	12505984	.	AAAGTCAAAATCCTG	A	16190.73	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=14.482;DP=508;FS=32.361;HRun=0;HaplotypeScore=196.0059;InbreedingCoeff=0.9093;MQ=84.71;MQ0=0;MQRankSum=-14.592;QD=63.74;ReadPosRankSum=3.043;VQSLOD=2.9959;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:54.19:0,54,3406	1/1:0,7:7:21.07:854,21,0	0/0:32,0:31:75.26:0,75,3849	0/0:33,0:33:71.03:0,71,3292	1/1:7,20:27:54.18:2041,54,0	0/0:16,0:16:33.11:0,33,2205	0/0:20,0:20:45.14:0,45,2797	0/0:28,0:28:72.23:0,72,4349	1/1:3,12:10:21.07:854,21,0	1/1:8,18:24:48.09:1655,48,0	1/1:4,7:11:17.13:730,17,0	1/1:4,16:13:26.93:1098,27,0	1/1:1,4:3:3.01:122,3,0	1/1:1,9:8:18.06:669,18,0	1/1:3,14:13:24.08:976,24,0	1/1:2,6:7:8.65:366,9,0	1/1:7,6:11:6.02:160,6,0	1/1:3,4:6:6.02:244,6,0	0/0:15,0:15:24.08:0,24,1395	0/0:27,0:27:75.26:0,75,4426	0/0:29,0:29:75.24:0,75,4668	1/1:7,17:24:51.13:1972,51,0	1/1:2,16:18:45.15:1798,45,0	1/1:4,6:10:9.03:281,9,0	0/0:28,0:28:69.24:0,69,4220	1/1:3,15:17:42.12:1516,42,0	1/1:4,8:7:12.04:488,12,0	1/1:2,4:5:9.03:366,9,0
chr10	12506928	.	T	TC	9466.88	PASS	AB=0.571;AC=47;AF=0.839;AN=56;BaseQRankSum=-6.080;DP=501;FS=1.724;HRun=8;HaplotypeScore=64.0001;InbreedingCoeff=0.8310;MQ=82.30;MQ0=2;MQRankSum=-3.956;QD=24.34;ReadPosRankSum=3.760;VQSLOD=5.6203;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:77.94:0,78,701	1/1:1,11:12:33.10:381,33,0	0/0:36,0:29:32.14:0,32,436	0/0:28,0:21:17.77:0,18,282	1/1:3,17:20:48.10:539,48,0	1/1:1,2:12:23.76:172,24,0	1/1:2,1:11:24.93:141,25,0	1/1:8,11:21:32.90:347,33,0	1/1:2,12:14:33.10:381,33,0	1/1:4,25:29:75.19:845,75,0	1/1:4,16:20:43.86:456,44,0	1/1:1,9:10:21.06:242,21,0	1/1:1,11:12:30.09:346,30,0	1/1:4,9:13:21.06:242,21,0	1/1:1,8:9:17.26:180,17,0	1/1:3,17:20:39.12:450,39,0	1/1:0,11:11:27.08:312,27,0	1/1:3,13:16:30.09:346,30,0	1/1:1,9:10:27.08:311,27,0	1/1:3,21:24:40.35:670,40,0	1/1:2,10:12:24.07:277,24,0	1/1:0,21:21:63.10:709,63,0	1/1:9,19:28:5.16:551,5,0	1/1:4,7:11:23.74:277,24,0	0/0:19,0:19:45:0,45,404	1/1:3,18:21:57.08:614,57,0	1/1:3,21:24:54.16:623,54,0	0/1:2,6:8:42.89:57,0,43
chr10	12509264	.	CT	C	11131.96	PASS	AB=1.000;AC=41;AF=0.732;AN=56;BaseQRankSum=10.513;DP=567;FS=4.009;HRun=5;HaplotypeScore=74.1270;InbreedingCoeff=0.9174;MQ=61.25;MQ0=1;MQRankSum=1.381;QD=28.76;ReadPosRankSum=4.395;VQSLOD=5.3592;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:63.19:0,63,842	1/1:2,7:9:18.05:204,18,0	0/1:18,0:16:7.71:8,0,412	0/0:17,0:14:30.10:0,30,397	1/1:0,27:27:75.21:849,75,0	1/1:0,22:22:54.15:612,54,0	1/1:0,10:10:30.09:340,30,0	0/0:34,0:34:84.26:0,84,1121	1/1:0,16:16:42.12:476,42,0	1/1:1,31:32:90.26:1021,90,0	1/1:2,32:34:87.25:987,87,0	1/1:1,13:14:36.10:408,36,0	1/1:1,15:16:42.12:476,42,0	1/1:0,15:15:42.12:476,42,0	1/1:1,23:24:60.17:681,60,0	1/1:0,5:5:15.04:170,15,0	1/1:3,14:17:42.12:476,42,0	1/1:3,7:10:21.06:238,21,0	0/0:20,0:19:57.19:0,57,780	0/0:44,0:44:99:0,126,1723	0/0:19,0:19:57.19:0,57,780	1/1:1,20:21:60.17:681,60,0	1/1:0,25:25:75.21:851,75,0	1/1:0,9:9:24.07:272,24,0	0/0:24,0:24:60.20:0,60,820	1/1:3,25:28:75.21:851,75,0	1/1:0,20:20:54.15:613,54,0	1/1:2,13:15:38.86:442,39,0
chr10	12509377	.	C	CAAG	24430.58	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-6.785;DP=621;FS=3.955;HRun=0;HaplotypeScore=86.4457;InbreedingCoeff=0.9970;MQ=65.08;MQ0=1;MQRankSum=-1.850;QD=56.95;ReadPosRankSum=3.847;VQSLOD=6.9591;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:38.40:0,38,1068	1/1:0,5:5:15.05:335,15,0	0/0:22,0:22:54.18:0,54,871	0/0:20,0:20:57.15:0,57,856	1/1:4,32:37:93.28:1992,93,0	1/1:2,18:22:57.19:1243,57,0	1/1:1,14:15:39.13:870,39,0	0/0:35,0:35:84.28:0,84,1346	1/1:1,23:24:69.24:1512,69,0	1/1:1,30:31:93.25:1902,93,0	1/1:2,26:28:78.22:1667,78,0	1/1:2,18:20:45.15:1004,45,0	1/1:2,16:19:48.16:1071,48,0	1/1:3,18:21:60.21:1308,60,0	1/1:4,16:21:45.15:976,45,0	1/1:1,17:18:45.15:1004,45,0	1/1:1,20:21:54.19:1204,54,0	1/1:0,11:11:27.09:603,27,0	0/0:17,0:16:48.16:0,48,774	0/0:29,0:29:81.26:0,81,1299	0/0:16,0:16:48.13:0,48,756	1/1:4,20:24:60.21:1269,60,0	1/1:2,22:24:60.21:1309,60,0	1/1:1,16:17:48.16:1070,48,0	0/0:25,0:25:75.22:0,75,1174	1/1:5,23:28:72.23:1558,72,0	1/1:3,30:33:90.31:1985,90,0	1/1:2,8:10:27.09:545,27,0
chr10	12510171	.	G	GT	13854.73	PASS	AB=0.708;AC=48;AF=0.857;AN=56;BaseQRankSum=-9.220;DP=486;FS=3.290;HRun=3;HaplotypeScore=38.0939;InbreedingCoeff=0.7059;MQ=56.20;MQ0=8;MQRankSum=1.911;QD=31.85;ReadPosRankSum=4.788;VQSLOD=4.2551;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:23,4:26:10.45:10,0,716	0/1:2,10:12:35.89:384,0,36	0/0:22,0:10:30.07:0,30,344	0/0:16,0:11:30.08:0,30,347	1/1:0,15:15:36.12:504,36,0	1/1:2,19:21:54.18:756,54,0	1/1:1,7:7:9.03:126,9,0	1/1:4,26:19:45.15:629,45,0	1/1:0,20:19:51.17:714,51,0	1/1:0,16:16:48.16:672,48,0	1/1:1,20:20:57.19:798,57,0	1/1:0,10:10:27.09:371,27,0	1/1:0,9:8:24.08:336,24,0	1/1:1,8:9:24.08:336,24,0	1/1:2,13:13:36.12:504,36,0	1/1:0,9:9:27.09:378,27,0	1/1:1,32:30:63.21:882,63,0	1/1:1,17:18:51.17:714,51,0	1/1:0,15:14:42.14:588,42,0	1/1:1,31:30:87.29:1218,87,0	1/1:0,10:10:24.08:336,24,0	1/1:1,12:13:27.09:378,27,0	1/1:1,19:20:48.16:672,48,0	1/1:1,21:23:60.20:840,60,0	0/0:13,0:13:36.11:0,36,432	1/1:1,17:16:42.13:571,42,0	1/1:0,23:23:63.21:882,63,0	1/1:1,7:8:18.06:252,18,0
chr10	12511511	.	AT	A	9128.41	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=11.940;DP=478;FS=1.259;HRun=7;HaplotypeScore=50.2290;InbreedingCoeff=0.9663;MQ=57.20;MQ0=1;MQRankSum=0.927;QD=27.01;ReadPosRankSum=3.153;VQSLOD=5.4196;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:63.18:0,63,777	1/1:0,12:12:36.08:367,36,0	0/0:2,0:2:6.02:0,6,75	0/0:5,0:4:9.03:0,9,113	1/1:0,23:23:63.14:643,63,0	1/1:1,24:25:69.16:704,69,0	1/1:0,6:6:18.04:184,18,0	0/0:18,0:18:48.13:0,48,589	1/1:0,16:16:48.11:490,48,0	1/1:6,25:31:78.15:788,78,0	1/1:2,25:26:75.17:765,75,0	1/1:0,7:7:18.04:184,18,0	1/1:1,9:10:27.06:275,27,0	1/1:1,9:10:29.74:287,30,0	1/1:0,15:15:42.10:429,42,0	1/1:0,10:10:30.07:306,30,0	1/1:4,17:21:26.02:453,26,0	1/1:4,16:20:42.38:408,42,0	0/0:15,0:14:30.10:0,30,377	0/0:34,0:34:96.78:0,97,1209	0/0:16,0:16:42.12:0,42,514	1/1:0,11:11:30.07:306,30,0	1/1:3,20:23:60.13:612,60,0	1/1:1,7:8:15.03:153,15,0	0/0:25,0:25:69.22:0,69,868	1/1:2,22:24:66.15:673,66,0	1/1:1,22:23:66.15:673,66,0	1/1:1,15:16:42.09:429,42,0
chr10	12512084	.	A	AT	13823.75	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=11.239;DP=586;FS=14.103;HRun=4;HaplotypeScore=82.0385;InbreedingCoeff=0.9959;MQ=65.23;MQ0=3;MQRankSum=-0.603;QD=36.38;ReadPosRankSum=5.672;VQSLOD=3.3908;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:81.18:0,81,900	1/1:0,10:10:27.09:369,27,0	0/0:31,0:27:53.44:0,53,655	0/0:23,0:16:39.10:0,39,432	1/1:1,27:28:75.21:1004,75,0	1/1:0,24:24:72.24:985,72,0	1/1:0,9:9:24.08:328,24,0	0/0:32,0:32:78.19:0,78,860	1/1:2,14:16:36.12:489,36,0	1/1:0,25:25:75.25:1026,75,0	1/1:4,27:31:81.18:1066,81,0	1/1:1,12:14:42.14:567,42,0	1/1:1,11:12:27.09:369,27,0	1/1:2,9:11:33.10:434,33,0	1/1:0,14:14:42.14:574,42,0	1/1:0,14:14:39.13:533,39,0	1/1:2,15:17:39.13:533,39,0	1/1:1,15:16:14.70:581,15,0	0/0:16,0:16:39.10:0,39,431	0/0:35,0:35:96.27:0,96,1088	0/0:15,0:15:42.12:0,42,476	1/1:0,25:25:66.18:882,66,0	1/1:1,33:34:87.04:1168,87,0	1/1:1,12:14:30.06:389,30,0	0/0:23,0:23:69.20:0,69,783	1/1:1,21:22:63.19:843,63,0	1/1:1,35:35:99:1353,99,0	1/1:0,8:8:24.08:328,24,0
chr10	12513407	.	A	AT	1966.98	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-5.178;DP=493;FS=3.541;HRun=1;HaplotypeScore=82.4657;InbreedingCoeff=0.9380;MQ=58.74;MQ0=1;MQRankSum=3.350;QD=22.87;ReadPosRankSum=-3.478;VQSLOD=2.7590;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:90.20:0,90,1072	0/0:8,0:8:23.94:0,24,194	0/0:8,0:6:5.08:0,5,65	0/0:7,0:6:11.78:0,12,97	0/0:29,0:29:74.77:0,75,605	0/0:20,0:19:56.92:0,57,469	0/0:16,0:16:44.93:0,45,368	1/1:19,2:21:57.56:606,58,0	0/0:17,0:17:50.75:0,51,425	0/0:20,0:21:53.81:0,54,441	0/0:19,0:19:56.80:0,57,470	0/0:8,0:8:20.97:0,21,172	0/0:14,0:14:32.96:0,33,274	0/0:5,0:5:8.99:0,9,74	0/0:18,0:18:50.94:0,51,423	0/0:13,0:13:32.96:0,33,273	0/0:15,0:16:35.87:0,36,297	0/0:15,0:15:35.89:0,36,284	1/1:16,0:16:41.27:399,41,0	1/1:31,2:33:94.31:848,94,0	1/1:15,1:16:27.01:274,27,0	0/0:22,0:22:62.91:0,63,518	0/0:31,0:31:83.66:0,84,698	0/0:10,0:10:26.94:0,27,217	0/0:25,0:25:72.10:0,72,827	0/0:22,0:22:65.93:0,66,556	0/0:22,0:22:59.90:0,60,488	0/0:7,0:7:17.95:0,18,142
chr10	12513408	.	TA	T	4996.16	PASS	AB=0.600;AC=39;AF=0.696;AN=56;BaseQRankSum=-3.686;DP=506;FS=1.330;HRun=12;HaplotypeScore=73.7872;InbreedingCoeff=0.8752;MQ=59.66;MQ0=1;MQRankSum=0.567;QD=14.96;ReadPosRankSum=4.666;VQSLOD=5.6419;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:87.07:0,87,844	1/1:0,8:8:20.91:163,21,0	0/0:8,0:6:9.02:0,9,89	0/0:8,0:7:8.08:0,8,40	1/1:3,24:29:63.80:476,64,0	1/1:2,0:19:34.63:100,35,0	1/1:2,0:16:26.48:76,26,0	0/0:5,0:24:54.13:0,54,270	1/1:6,12:18:8.37:248,8,0	1/1:1,18:20:52.83:400,53,0	1/1:2,17:19:17.37:318,17,0	1/1:0,8:8:20.92:163,21,0	1/1:1,13:14:29.88:232,30,0	1/1:2,4:6:5.95:46,6,0	1/1:3,15:18:41.82:325,42,0	1/1:2,12:14:29.87:232,30,0	0/1:5,10:15:3.57:159,0,4	1/1:3,9:15:25.91:192,26,0	0/0:2,0:17:28.13:0,28,129	0/0:7,0:37:64.23:0,64,302	0/0:1,0:18:16.14:0,16,98	1/1:1,20:22:58.81:447,59,0	1/1:5,23:31:65.77:482,66,0	1/1:3,7:10:17.93:139,18,0	0/0:24,1:25:36.88:0,37,555	1/1:5,17:22:50.80:395,51,0	1/1:4,17:22:30.19:335,30,0	1/1:3,4:7:8.63:69,9,0
chr10	12514300	.	TA	T	4271.28	PASS	AB=0.933;AC=41;AF=0.854;AN=48;BaseQRankSum=9.882;DP=402;FS=2.091;HRun=8;HaplotypeScore=162.2075;InbreedingCoeff=0.7431;MQ=50.20;MQ0=16;MQRankSum=-7.992;QD=14.58;ReadPosRankSum=1.458;VQSLOD=3.2878;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:66.01:0,66,731	1/1:0,6:5:15.02:145,15,0	0/1:13,1:9:5.48:5,0,194	0/0:8,0:8:12.04:0,12,144	1/1:3,27:27:50.89:459,51,0	./.	./.	1/1:3,16:7:12:107,12,0	1/1:3,18:19:44.94:411,45,0	1/1:0,23:18:54.04:511,54,0	1/1:3,20:20:38.56:318,39,0	1/1:2,11:12:24.02:231,24,0	1/1:4,9:11:18.02:174,18,0	1/1:1,13:10:23.93:212,24,0	1/1:1,12:10:23.99:222,24,0	1/1:2,8:9:14.97:134,15,0	./.	1/1:3,5:6:11.68:87,12,0	1/1:0,6:2:6.01:56,6,0	./.	1/1:2,1:2:5.98:46,6,0	1/1:2,7:7:15.02:145,15,0	1/1:1,19:13:26.89:238,27,0	1/1:2,5:6:6:58,6,0	0/0:17,0:17:48.15:0,48,580	1/1:2,8:9:24.03:231,24,0	1/1:2,20:19:36.05:347,36,0	1/1:2,7:8:14.98:136,15,0
chr10	12514323	.	TACAAAAGCCTATATTCAAA	T	24083.34	PASS	AB=0.675;AC=34;AF=0.630;AN=54;BaseQRankSum=12.076;DP=353;FS=0.000;HRun=0;HaplotypeScore=196.7731;InbreedingCoeff=0.7585;MQ=37.88;MQ0=24;MQRankSum=-8.487;QD=116.34;ReadPosRankSum=7.224;VQSLOD=4.1421;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:25:69.24:0,69,4856	1/1:0,8:8:21.07:1140,21,0	0/0:16,0:5:12.04:0,12,476	./.	1/1:5,20:25:57.20:3003,57,0	0/0:14,0:3:6.02:0,6,553	0/0:5,0:2:3.01:0,3,276	0/0:16,0:10:30.10:0,30,2394	1/1:1,15:16:45.15:2444,45,0	1/1:4,16:19:48.16:2607,48,0	1/1:5,13:18:39.13:2025,39,0	1/1:3,7:10:21.07:1140,21,0	1/1:3,6:8:18.06:978,18,0	1/1:3,8:10:24.08:1303,24,0	1/1:2,9:10:27.09:1466,27,0	1/1:2,5:7:15.05:815,15,0	0/1:2,4:5:99:317,0,263	0/1:4,2:4:99:314,0,193	0/0:9,0:8:21.07:0,21,1404	0/0:30,0:9:27.09:0,27,2453	0/0:5,0:4:12.04:0,12,1081	1/1:2,5:7:15.05:815,15,0	1/1:2,9:11:27.09:1377,27,0	1/1:2,4:5:6.02:326,6,0	0/0:16,0:16:45.15:0,45,3497	1/1:2,9:11:27.09:1243,27,0	1/1:5,13:17:39.13:2118,39,0	1/1:3,4:6:12.04:652,12,0
chr10	12514478	.	C	CA	5525.26	PASS	AB=0.756;AC=35;AF=0.625;AN=56;BaseQRankSum=-5.098;DP=409;FS=6.918;HRun=9;HaplotypeScore=48.2678;InbreedingCoeff=0.7578;MQ=73.26;MQ0=0;MQRankSum=-0.783;QD=20.85;ReadPosRankSum=3.437;VQSLOD=5.3066;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:20:52.17:0,52,422	1/1:1,6:8:20.89:213,21,0	0/0:17,0:16:25.43:0,25,228	0/1:13,0:11:23.16:23,0,100	1/1:4,17:21:45.06:482,45,0	0/0:15,0:9:20.98:0,21,181	0/0:6,0:6:18:0,18,156	0/0:17,0:17:50.97:0,51,437	1/1:4,8:12:24.06:265,24,0	1/1:4,11:15:33.09:360,33,0	1/1:1,14:16:38.90:364,39,0	1/1:2,8:10:24.06:264,24,0	1/1:1,10:10:21.06:232,21,0	1/1:3,13:16:6.99:292,7,0	1/1:1,16:15:27.07:299,27,0	1/1:1,4:6:11.87:114,12,0	1/1:3,10:13:36.07:386,36,0	1/1:2,17:19:45.12:498,45,0	0/0:18,0:18:47.99:0,48,416	0/0:20,0:21:53.01:0,53,449	0/0:12,0:12:32.99:0,33,286	0/1:6,6:11:11.01:118,0,11	0/1:7,14:21:9.99:353,0,10	1/1:1,8:9:15.04:166,15,0	0/0:18,0:18:44.98:0,45,391	1/1:3,16:20:18.12:466,18,0	1/1:2,17:19:42.11:464,42,0	1/1:0,6:6:15.04:166,15,0
chr10	12514653	.	C	CA	888.12	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-6.355;DP=531;FS=4.177;HRun=9;HaplotypeScore=59.3622;InbreedingCoeff=0.9486;MQ=60.28;MQ0=0;MQRankSum=2.854;QD=22.77;ReadPosRankSum=0.354;VQSLOD=4.5276;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:41.98:0,42,365	0/0:13,0:13:23.97:0,24,208	0/0:19,0:16:28.46:0,28,224	0/0:12,0:11:17.95:0,18,148	0/0:20,1:21:11.81:0,12,331	1/1:0,18:18:48.13:531,48,0	1/1:4,16:21:44.95:479,45,0	0/0:28,0:27:65.96:0,66,570	0/0:13,0:13:32.99:0,33,286	0/0:25,0:25:53.98:0,54,469	0/0:23,0:22:50.97:0,51,443	0/0:14,0:14:26.98:0,27,234	0/0:12,0:12:29.99:0,30,260	0/0:12,0:12:29.98:0,30,260	0/0:14,0:14:38.96:0,39,333	0/0:9,0:9:23.98:0,24,204	0/0:27,0:26:42.25:0,42,500	0/0:20,1:21:15.90:0,16,339	0/0:15,0:15:29.99:0,30,260	0/0:34,1:24:38.79:0,39,562	0/0:7,0:8:17.01:0,17,136	0/0:21,0:21:56.94:0,57,486	0/0:18,1:18:11.80:0,12,331	0/0:19,0:19:44.99:0,45,390	0/0:19,0:18:47.99:0,48,416	0/0:26,0:26:56.96:0,57,495	0/0:30,0:30:77.93:0,78,669	0/0:18,0:17:50.99:0,51,443
chr10	12514852	.	G	GAA	2558.52	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-7.944;DP=524;FS=0.424;HRun=9;HaplotypeScore=110.9866;InbreedingCoeff=0.9731;MQ=59.65;MQ0=4;MQRankSum=0.096;QD=20.31;ReadPosRankSum=-1.407;VQSLOD=2.2296;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:22:39.42:0,39,484	0/0:6,0:6:15.02:0,15,160	0/0:14,0:8:8.96:0,9,96	0/0:6,0:5:11.59:0,12,91	0/0:24,0:25:57.01:0,57,641	1/1:3,1:19:40.32:174,40,0	1/1:4,0:19:34.93:120,35,0	1/1:4,11:16:35.44:432,35,0	0/0:26,0:26:72.18:0,72,766	0/0:29,0:29:76.95:0,77,784	0/0:21,0:21:54.13:0,54,575	0/0:13,0:13:27.04:0,27,280	0/0:17,0:17:20.27:0,20,196	0/0:9,0:9:24.06:0,24,255	0/0:12,0:12:30.07:0,30,319	0/0:18,0:18:48.02:0,48,482	0/0:19,0:19:48.09:0,48,502	0/0:17,0:17:36.01:0,36,370	1/1:1,16:18:51.16:746,51,0	1/1:6,25:32:68.57:922,69,0	1/1:5,10:19:29.06:352,29,0	0/0:29,0:29:81.18:0,81,861	0/0:23,0:23:57.10:0,57,589	0/0:6,0:6:15.01:0,15,150	0/0:17,0:17:42.08:0,42,447	0/0:16,0:16:36.05:0,36,383	0/0:33,0:33:84.11:0,84,852	0/0:19,0:19:51.09:0,51,542
chr10	12514909	.	AC	A	14394.31	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=5.220;DP=610;FS=5.328;HRun=1;HaplotypeScore=75.4303;InbreedingCoeff=0.9996;MQ=63.74;MQ0=1;MQRankSum=0.446;QD=37.39;ReadPosRankSum=6.223;VQSLOD=4.9741;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:87.28:0,87,1361	1/1:0,12:12:30.10:420,30,0	0/0:20,0:19:57.19:0,57,879	0/0:17,0:16:48.08:0,48,736	1/1:0,31:31:93.23:1257,93,0	0/0:18,0:18:54.15:0,54,814	0/0:11,0:11:33.08:0,33,474	0/0:31,0:31:93.31:0,93,1458	1/1:0,23:23:63.21:881,63,0	1/1:1,33:34:99:1396,102,0	1/1:0,27:27:75.21:1027,75,0	1/1:0,15:15:33.11:462,33,0	1/1:0,18:18:36.11:504,36,0	1/1:0,13:13:33.11:462,33,0	1/1:0,15:15:36.12:504,36,0	1/1:0,14:14:33.11:462,33,0	1/1:0,23:23:54.18:755,54,0	1/1:1,13:14:36.12:503,36,0	0/0:13,0:13:39.13:0,39,618	0/0:31,0:30:87.23:0,87,1332	0/0:31,0:31:87.25:0,87,1337	1/1:0,34:34:96.20:1277,96,0	1/1:0,25:25:69.23:965,69,0	1/1:0,9:9:27.09:377,27,0	0/0:22,0:22:66.21:0,66,1032	1/1:0,25:25:75.21:1027,75,0	1/1:1,30:31:52.56:1196,53,0	1/1:0,22:22:66.22:923,66,0
chr10	12515471	.	CT	C	5486.92	PASS	AB=0.568;AC=39;AF=0.696;AN=56;BaseQRankSum=2.009;DP=432;FS=5.693;HRun=10;HaplotypeScore=77.4162;InbreedingCoeff=0.9033;MQ=76.10;MQ0=10;MQRankSum=1.055;QD=20.03;ReadPosRankSum=5.549;VQSLOD=5.4667;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:33.09:0,33,365	1/1:1,2:3:6:52,6,0	0/0:33,0:16:38.91:0,39,311	0/0:26,2:13:21.11:0,21,144	0/1:6,19:25:3.38:432,0,3	1/1:1,6:7:17.99:156,18,0	1/1:2,5:7:14.99:130,15,0	0/0:8,0:23:48.82:0,49,292	1/1:2,8:10:23.99:208,24,0	1/1:7,23:30:65.96:573,66,0	1/1:3,25:27:59.95:520,60,0	1/1:0,8:8:24:208,24,0	1/1:1,10:11:23.99:208,24,0	1/1:0,9:9:26.99:234,27,0	1/1:2,12:14:29.99:260,30,0	1/1:0,4:4:12:104,12,0	1/1:2,9:10:23.99:208,24,0	1/1:1,13:13:29.99:260,30,0	0/0:4,0:14:31.30:0,31,164	0/0:1,0:18:45.76:0,46,241	0/0:1,0:9:19.89:0,20,99	1/1:1,12:13:32.99:287,33,0	1/1:1,21:22:63.87:549,64,0	1/1:2,3:5:9:78,9,0	0/0:14,0:14:30.08:0,30,332	1/1:2,11:13:35.99:311,36,0	1/1:6,22:27:40.42:498,40,0	1/1:1,8:9:23.99:208,24,0
chr10	12516051	.	T	TA	1021.25	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-1.509;DP=492;FS=0.672;HRun=8;HaplotypeScore=96.4554;InbreedingCoeff=0.9712;MQ=58.95;MQ0=2;MQRankSum=-0.073;QD=24.91;ReadPosRankSum=-0.645;VQSLOD=3.4914;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:51.01:0,51,463	0/0:9,0:9:21:0,21,192	0/0:15,0:10:23.99:0,24,213	0/0:14,0:14:29.92:0,30,251	0/0:27,0:27:63.03:0,63,576	1/1:2,22:24:63.05:693,63,0	1/1:1,16:17:39.12:450,39,0	0/0:19,0:18:50.98:0,51,454	0/0:20,0:20:51.02:0,51,467	0/0:25,0:25:66.03:0,66,604	0/0:29,0:29:84.04:0,84,765	0/0:8,0:8:18.01:0,18,165	0/0:10,0:10:29.99:0,30,267	0/0:9,0:9:27.01:0,27,247	0/0:10,0:10:17.99:0,18,160	0/0:21,0:21:60.02:0,60,545	0/0:22,0:22:54.50:0,54,494	0/0:17,0:17:41.99:0,42,373	0/0:22,0:20:45.01:0,45,412	0/0:28,0:28:75.02:0,75,680	0/0:10,0:10:26.99:0,27,241	0/0:19,0:19:54.02:0,54,494	0/0:18,0:18:48.01:0,48,436	0/0:12,0:12:33.02:0,33,302	0/0:15,0:15:42.02:0,42,384	0/0:14,0:14:39.01:0,39,357	0/0:32,0:31:96.03:0,96,873	0/0:6,0:6:11.99:0,12,104
chr10	12518239	.	T	TACAC	2486.81	PASS	AB=0.741;AC=34;AF=0.680;AN=50;BaseQRankSum=-0.784;DP=487;FS=0.831;HRun=0;HaplotypeScore=94.6479;InbreedingCoeff=0.4208;MQ=59.67;MQ0=13;MQRankSum=0.321;QD=8.18;ReadPosRankSum=0.862;VQSLOD=2.6011;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:30:24.20:64,0,24	0/0:5,0:6:6.01:0,6,74	./.	./.	0/0:23,0:23:8.54:0,9,240	1/1:16,1:28:8.77:153,9,0	1/1:7,5:12:6.02:117,6,0	0/0:24,0:24:2.65:0,3,37	./.	1/1:15,0:15:13.82:121,14,0	1/1:5,5:12:11.78:224,12,0	0/1:7,4:12:18.67:19,0,38	1/1:12,0:12:8.99:114,9,0	1/1:6,3:12:10.71:160,11,0	1/1:12,6:19:6.02:141,6,0	1/1:6,0:6:3.01:56,3,0	1/1:15,0:15:10.81:132,11,0	1/1:7,6:15:14.52:201,15,0	0/0:16,0:16:9.02:0,9,121	0/0:14,0:14:20.72:0,21,273	0/0:25,0:24:17.13:0,17,242	1/1:12,3:16:5.61:81,6,0	1/1:10,7:18:15.52:353,16,0	1/1:10,4:15:6.02:141,6,0	0/1:6,0:15:6.44:6,0,22	1/1:19,0:18:12.47:173,12,0	1/1:10,2:13:6.02:140,6,0	0/1:9,6:18:67.84:260,0,68
chr10	12518546	.	C	CCAA	9967.29	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=7.989;DP=528;FS=0.347;HRun=0;HaplotypeScore=93.0297;InbreedingCoeff=0.9949;MQ=80.61;MQ0=1;MQRankSum=-4.836;QD=29.75;ReadPosRankSum=5.431;VQSLOD=5.0546;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,99,1669	1/1:0,0:9:21.03:224,21,0	0/0:33,0:32:61.99:0,62,1019	0/0:15,0:15:41.87:0,42,569	1/1:0,0:21:56.96:586,57,0	1/1:0,15:16:30.10:707,30,0	1/1:0,15:20:45.15:1028,45,0	0/0:24,0:24:69.19:0,69,1081	1/1:1,0:17:45.13:504,45,0	1/1:0,0:20:54.10:569,54,0	1/1:2,0:15:39.07:459,39,0	1/1:0,0:13:30.09:336,30,0	1/1:0,0:5:15.04:168,15,0	1/1:0,0:21:51.14:569,51,0	1/1:2,0:25:53.05:576,53,0	1/1:0,0:12:27.07:302,27,0	1/1:0,0:17:45.13:528,45,0	1/1:0,0:14:39.11:435,39,0	0/0:24,0:24:72.19:0,72,1191	0/0:26,0:26:63.22:0,63,1123	0/0:20,0:20:56.46:0,56,901	1/1:0,0:20:48.10:526,48,0	1/1:0,0:22:54.15:615,54,0	1/1:1,0:20:42.12:470,42,0	0/0:14,0:14:39.12:0,39,689	1/1:0,0:15:33.10:432,33,0	1/1:0,0:25:63.16:687,63,0	1/1:0,0:6:18.05:248,18,0
chr10	12522344	.	A	AAC	7499.16	PASS	AB=0.874;AC=41;AF=0.732;AN=56;BaseQRankSum=0.860;DP=569;FS=0.959;HRun=0;HaplotypeScore=116.5986;InbreedingCoeff=0.7543;MQ=66.36;MQ0=16;MQRankSum=-3.673;QD=19.43;ReadPosRankSum=-0.604;VQSLOD=5.0061;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:38:71.31:0,71,953	1/1:5,1:7:17.79:220,18,0	0/0:36,0:28:13.10:0,13,438	0/0:33,0:26:18.78:0,19,486	1/1:16,1:17:35.84:479,36,0	0/0:25,0:24:40.48:0,40,228	0/0:31,0:30:33.26:0,33,275	1/1:14,0:14:15.03:158,15,0	1/1:14,6:17:37.66:496,38,0	0/1:13,2:15:6.55:347,0,7	1/1:12,1:12:24.03:281,24,0	1/1:12,5:16:31.19:362,31,0	1/1:7,1:7:15.04:190,15,0	1/1:13,2:15:28.30:342,28,0	1/1:13,1:14:36.11:489,36,0	1/1:10,0:9:18.02:210,18,0	1/1:23,9:27:23.48:729,23,0	0/1:11,6:14:0.53:418,0,1	0/1:14,0:13:4.98:29,0,5	1/1:17,0:17:5.51:47,6,0	1/1:34,1:32:11.58:99,12,0	1/1:16,4:19:34.82:425,35,0	1/1:12,1:13:16.19:220,16,0	1/1:31,11:40:73.71:1004,74,0	0/0:16,0:18:29.67:0,30,464	1/1:11,2:12:27.05:301,27,0	1/1:22,3:24:46.58:516,47,0	1/1:5,2:6:12.03:138,12,0
chr10	12522359	.	ACG	A	7245.15	PASS	AB=0.875;AC=40;AF=0.714;AN=56;BaseQRankSum=5.274;DP=580;FS=0.905;HRun=0;HaplotypeScore=123.7585;InbreedingCoeff=0.5602;MQ=52.59;MQ0=23;MQRankSum=-2.238;QD=18.30;ReadPosRankSum=-2.321;VQSLOD=4.5885;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:88.80:0,89,1407	1/1:5,3:8:20.46:217,20,0	0/0:30,0:17:13.10:0,13,444	0/0:39,0:21:18.78:0,19,486	1/1:7,10:17:32.94:463,33,0	0/0:22,0:21:23.97:0,24,107	0/0:30,1:31:29.12:0,29,184	0/1:14,0:14:26.27:123,0,26	1/1:14,9:20:44.59:571,45,0	1/1:7,7:14:1.89:387,2,0	1/1:8,5:12:21.03:249,21,0	1/1:9,8:16:29.19:305,29,0	1/1:5,5:9:17.93:236,18,0	1/1:5,8:13:23.58:306,24,0	1/1:2,11:13:32.97:488,33,0	1/1:5,4:8:20.91:241,21,0	1/1:21,13:29:1.28:676,1,0	0/1:11,5:13:31.43:275,0,31	0/1:18,0:17:45.68:46,0,49	1/1:16,0:15:8.99:74,9,0	1/1:37,2:35:10.61:183,11,0	1/1:12,9:20:38.03:396,38,0	1/1:4,7:11:17.99:234,18,0	1/1:26,15:39:64.73:735,65,0	0/0:18,0:18:38.65:0,39,704	0/1:11,6:16:38.05:272,0,38	1/1:16,9:24:60.91:618,61,0	1/1:4,3:6:10.27:150,10,0
chr10	12522384	.	CGCACAT	C	9442.15	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=8.297;DP=558;FS=6.977;HRun=0;HaplotypeScore=148.6296;InbreedingCoeff=0.9551;MQ=51.84;MQ0=17;MQRankSum=-2.920;QD=27.29;ReadPosRankSum=4.822;VQSLOD=4.1032;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:90.28:0,90,2075	1/1:6,0:6:15.05:270,15,0	0/0:25,0:10:27.09:0,27,489	0/0:36,0:14:42.13:0,42,777	1/1:11,1:11:12.04:210,12,0	1/1:7,14:21:9.03:191,9,0	1/1:11,11:22:6.02:71,6,0	0/0:15,0:15:33.11:0,33,610	1/1:24,0:24:48.16:763,48,0	1/1:20,0:20:51.17:843,51,0	1/1:11,0:10:18.06:289,18,0	1/1:27,0:27:57.18:894,57,0	1/1:12,0:12:20.81:347,21,0	1/1:12,0:12:24.08:364,24,0	1/1:11,0:11:21.07:330,21,0	1/1:8,0:8:18.06:304,18,0	1/1:28,0:25:53.84:937,54,0	1/1:14,0:13:14.98:215,15,0	0/0:13,0:13:27.09:0,27,508	0/0:18,0:18:26.62:0,27,470	0/0:42,0:40:66.12:0,66,1364	1/1:20,0:20:42.05:619,42,0	1/1:14,0:14:24.42:388,24,0	1/1:36,0:36:44.92:660,45,0	0/0:16,0:16:42.14:0,42,1139	1/1:18,0:18:39.13:638,39,0	1/1:22,0:22:51.17:860,51,0	1/1:8,0:8:15.05:249,15,0
chr10	12522388	.	CAT	C	8991.57	PASS	AB=0.737;AC=35;AF=0.625;AN=56;BaseQRankSum=9.162;DP=546;FS=0.380;HRun=0;HaplotypeScore=107.5897;InbreedingCoeff=0.7889;MQ=53.51;MQ0=14;MQRankSum=0.022;QD=27.67;ReadPosRankSum=5.097;VQSLOD=6.1835;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,1:46:99:0,120,2133	1/1:1,5:6:16.30:229,16,0	0/0:24,0:10:30.06:0,30,508	0/0:37,0:16:48.12:0,48,855	1/1:2,9:10:13.29:185,13,0	0/1:20,0:20:60.59:61,0,230	0/0:18,0:18:23.74:0,24,293	0/0:17,0:17:38.94:0,39,746	1/1:3,20:23:50.65:761,51,0	1/1:3,20:23:64.31:879,64,0	1/1:1,8:9:18.05:292,18,0	1/1:4,24:28:60.93:913,61,0	1/1:2,9:11:20.86:333,21,0	1/1:2,10:12:26.57:394,27,0	1/1:2,9:11:22.32:343,22,0	1/1:1,7:8:18.06:282,18,0	1/1:7,21:26:14.42:744,14,0	0/1:6,7:12:20.12:192,0,20	0/0:11,0:11:33.08:0,33,557	0/0:16,0:16:29.70:0,30,549	0/0:36,0:35:68.97:0,69,1330	1/1:3,18:21:45.88:670,46,0	1/1:1,12:13:23.91:380,24,0	1/1:12,21:33:56.10:680,56,0	0/0:16,0:16:48.16:0,48,946	1/1:3,17:20:11.44:647,11,0	1/1:3,23:26:55.48:791,55,0	0/1:2,7:9:0.67:218,0,1
chr10	12522399	.	ACATG	A	1469.93	PASS	AB=0.990;AC=21;AF=0.375;AN=56;BaseQRankSum=15.247;DP=586;FS=29.853;HRun=0;HaplotypeScore=149.0049;InbreedingCoeff=-0.4012;MQ=66.25;MQ0=12;MQRankSum=-2.804;QD=4.12;ReadPosRankSum=9.143;VQSLOD=0.7232;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,135,3073	0/1:6,0:6:23.25:59,0,23	0/0:30,1:17:48.12:0,48,943	0/0:40,0:25:69.20:0,69,1492	0/1:14,0:13:31.10:31,0,100	0/1:15,0:15:27.98:59,0,28	0/1:18,0:18:53.12:53,0,142	0/0:20,0:20:60.19:0,60,1182	0/1:24,1:25:99:126,0,121	0/1:27,0:27:99:146,0,213	0/1:11,0:11:29.20:29,0,60	0/1:25,0:25:5.21:121,0,5	0/1:13,0:13:45.03:45,0,57	0/1:13,0:13:32.10:32,0,102	0/1:13,0:13:26.43:26,0,95	0/1:10,0:10:40.14:40,0,96	0/1:31,1:29:99:278,0,172	0/1:12,1:12:55.42:55,0,119	0/0:15,0:15:45.15:0,45,906	0/0:18,0:18:35.88:0,36,878	0/0:39,0:38:78.16:0,78,1984	0/1:18,0:18:3.88:92,0,4	1/1:13,0:13:10.86:67,11,0	0/1:30,2:32:99:103,0,201	0/0:15,0:15:45.15:0,45,1169	0/1:23,0:23:92.48:92,0,121	0/1:26,0:26:77.65:148,0,78	0/1:10,0:10:31.79:32,0,62
chr10	12522883	.	GTA	G	9545.25	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=18.167;DP=562;FS=5.827;HRun=0;HaplotypeScore=166.5233;InbreedingCoeff=0.9824;MQ=62.54;MQ0=0;MQRankSum=-15.720;QD=29.74;ReadPosRankSum=5.764;VQSLOD=5.8808;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:29:81.21:0,81,1425	1/1:1,6:7:15.05:213,15,0	0/0:22,0:21:39.51:0,40,779	0/0:27,0:27:69.27:0,69,1280	1/1:1,15:16:29.85:374,30,0	0/0:26,0:26:75.24:0,75,1318	0/0:21,0:21:57.20:0,57,1024	0/0:36,0:36:96.11:0,96,1576	1/1:2,18:21:41.87:566,42,0	1/1:4,20:24:69.81:832,70,0	1/1:1,16:17:39.04:509,39,0	1/1:3,6:9:23.48:255,23,0	1/1:0,18:18:36.05:486,36,0	1/1:1,20:21:48.16:678,48,0	1/1:0,20:20:39.13:553,39,0	1/1:2,15:17:42.07:553,42,0	1/1:1,7:8:8.92:100,9,0	1/1:1,11:12:18.04:256,18,0	0/0:14,0:14:42.12:0,42,698	0/0:23,0:23:54.19:0,54,980	0/0:33,0:33:93.28:0,93,1606	1/1:2,19:21:51.14:693,51,0	1/1:3,28:32:69.22:952,69,0	1/1:2,12:14:12.01:150,12,0	0/0:10,0:10:27.07:0,27,428	1/1:0,22:22:63.09:847,63,0	1/1:2,25:27:72.24:1006,72,0	1/1:5,10:15:42.08:522,42,0
chr10	12522886	.	T	TGG	9103.71	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=18.030;DP=606;FS=5.449;HRun=0;HaplotypeScore=186.0850;InbreedingCoeff=0.9937;MQ=60.33;MQ0=0;MQRankSum=-15.305;QD=25.36;ReadPosRankSum=4.338;VQSLOD=5.4517;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:84.26:0,84,1333	1/1:6,0:6:15.01:138,15,0	0/0:20,0:19:51.16:0,51,807	0/0:28,0:28:83.84:0,84,1285	1/1:18,1:19:38.97:426,39,0	0/0:28,0:28:81.26:0,81,1290	0/0:20,0:20:57.19:0,57,930	0/0:37,0:37:99:0,105,1682	1/1:23,1:24:54.05:629,54,0	1/1:25,3:28:81.03:990,81,0	1/1:17,1:18:41.95:416,42,0	1/1:7,4:11:27.07:392,27,0	1/1:19,0:19:37.53:314,38,0	1/1:21,1:22:50.49:466,50,0	1/1:23,0:23:47.95:484,48,0	1/1:19,0:19:50.41:505,50,0	1/1:9,0:9:15.03:228,15,0	1/1:13,0:13:21.01:204,21,0	0/0:15,0:15:45.15:0,45,710	0/0:25,0:25:57.18:0,57,905	0/0:34,0:34:99:0,99,1559	1/1:21,2:23:56.97:560,57,0	1/1:35,2:37:83.28:1003,83,0	1/1:16,0:16:21.02:251,21,0	0/0:10,0:10:27.09:0,27,440	1/1:25,0:25:61.61:652,62,0	1/1:29,1:29:83.63:886,84,0	1/1:17,0:17:48.07:561,48,0
chr10	12523261	.	CGG	C	490.18	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=0.288;DP=473;FS=4.637;HRun=6;HaplotypeScore=119.3579;InbreedingCoeff=0.8902;MQ=66.21;MQ0=4;MQRankSum=1.674;QD=13.62;ReadPosRankSum=1.797;VQSLOD=0.2752;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:67.87:0,68,1032	0/0:10,0:10:21.04:0,21,256	0/0:18,0:16:30.59:0,31,435	0/0:27,0:20:41.15:0,41,465	0/0:15,0:15:27.04:0,27,342	1/1:17,5:22:19.06:363,19,0	1/1:9,5:14:7.58:238,8,0	0/0:29,0:29:51.62:0,52,468	0/0:21,0:21:47.83:0,48,556	0/0:18,0:17:28.05:0,28,502	0/0:17,0:17:22.58:0,23,242	0/0:15,0:15:32.88:0,33,363	0/0:9,0:9:21:0,21,305	0/0:10,0:10:20.91:0,21,246	0/0:13,0:13:36.71:0,37,416	0/0:7,0:7:18.05:0,18,296	0/0:15,0:15:23.81:0,24,280	0/0:14,0:14:25.85:0,26,311	0/0:18,0:16:30.72:0,31,221	0/0:17,0:15:16.57:0,17,104	0/0:26,0:23:17.26:0,17,114	0/0:17,0:17:21.01:0,21,289	0/0:17,0:16:23.97:0,24,254	0/0:8,0:8:8.94:0,9,89	0/0:8,0:8:15.05:0,15,367	0/0:23,0:21:56.98:0,57,747	0/0:23,0:22:51.01:0,51,711	0/0:9,0:9:24.83:0,25,258
chr10	12523277	.	G	GAC	233.43	PASS	AB=0.890;AC=6;AF=0.107;AN=56;BaseQRankSum=2.326;DP=521;FS=3.157;HRun=0;HaplotypeScore=139.0324;InbreedingCoeff=0.1384;MQ=45.99;MQ0=10;MQRankSum=-4.402;QD=2.00;ReadPosRankSum=-3.046;VQSLOD=2.0043;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:69.83:0,70,1027	0/0:12,0:11:11.70:0,12,149	0/0:13,0:11:32.87:0,33,358	0/0:18,0:11:19.91:0,20,226	0/0:18,0:16:16.44:0,16,198	0/1:21,0:21:21.07:21,0,180	0/0:18,0:18:32.73:0,33,311	0/1:22,2:19:16.78:183,0,17	0/0:23,0:23:30.93:0,31,314	0/0:22,0:18:38.35:0,38,374	0/0:22,0:22:13.58:0,14,149	0/0:14,0:13:14.82:0,15,138	0/0:13,0:13:16.73:0,17,177	0/0:11,0:11:12.38:0,12,152	0/0:14,0:14:16.30:0,16,230	0/0:7,0:7:16.95:0,17,204	0/0:19,0:19:17.09:0,17,113	0/0:11,0:10:20.85:0,21,178	0/1:13,0:12:51.27:61,0,51	0/1:9,12:20:7.02:75,0,7	1/1:29,8:31:2.20:8,2,0	0/0:20,0:18:15.03:0,15,204	0/0:24,0:21:14.13:0,14,137	0/0:16,0:16:2.63:0,3,25	0/0:14,0:14:39.02:0,39,499	0/0:22,0:20:55.38:0,55,538	0/0:28,0:27:45.03:0,45,420	0/0:12,0:12:27.72:0,28,166
chr10	12523289	.	C	CAG	1387.16	PASS	AB=0.942;AC=40;AF=0.714;AN=56;BaseQRankSum=5.497;DP=503;FS=13.597;HRun=0;HaplotypeScore=133.9942;InbreedingCoeff=0.2725;MQ=43.32;MQ0=12;MQRankSum=-2.440;QD=3.27;ReadPosRankSum=0.910;VQSLOD=2.1598;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:78.19:0,78,1052	1/1:9,1:9:2.40:17,2,0	0/0:12,0:9:12.23:0,12,137	0/1:16,0:7:0.04:0,0,0	1/1:18,0:16:6.88:51,7,0	0/1:19,0:19:10.24:123,0,10	0/0:20,0:20:12.53:0,13,43	0/1:20,0:14:10.22:10,0,102	1/1:17,5:22:2.95:154,3,0	1/1:24,0:20:14.50:154,15,0	1/1:17,3:20:3:25,3,0	1/1:16,1:16:9.71:85,10,0	0/1:10,4:14:16.86:72,0,17	1/1:11,0:11:5.99:49,6,0	0/1:13,2:15:0:0,0,0	1/1:7,1:8:3.95:49,4,0	1/1:7,11:18:8.39:105,8,0	1/1:7,5:11:11.25:133,11,0	0/1:6,0:5:10.46:10,0,11	0/1:18,0:18:5.43:9,0,5	1/1:37,0:30:2.16:8,2,0	1/1:18,2:18:2.51:7,3,0	1/1:24,0:21:3.35:25,3,0	1/1:18,0:18:4.35:26,4,0	0/0:16,0:16:42.14:0,42,571	1/1:17,1:17:6.54:87,7,0	0/1:24,4:27:0.17:212,0,0	1/1:9,2:11:12.98:128,13,0
chr10	12523293	.	GAC	G	2380.39	PASS	AB=0.882;AC=41;AF=0.732;AN=56;BaseQRankSum=3.076;DP=498;FS=17.819;HRun=0;HaplotypeScore=124.9152;InbreedingCoeff=0.3231;MQ=42.81;MQ0=13;MQRankSum=0.610;QD=5.75;ReadPosRankSum=-4.245;VQSLOD=0.9330;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:81:0,81,1361	1/1:9,1:9:5.87:35,6,0	0/0:14,0:7:13.83:0,14,164	0/0:16,1:5:2.60:0,3,20	1/1:14,1:13:9.86:73,10,0	0/1:17,0:17:99:153,0,132	0/1:18,0:18:99:151,0,191	0/1:14,6:14:99:135,0,114	1/1:22,1:23:8.69:155,9,0	1/1:24,3:23:33.26:344,33,0	1/1:17,2:19:8.99:75,9,0	0/1:11,3:13:0.18:88,0,0	1/1:14,0:14:16.90:138,17,0	1/1:12,0:12:11.80:92,12,0	1/1:16,0:16:11.49:99,11,0	1/1:7,0:7:5.23:24,5,0	1/1:17,1:18:7.16:44,7,0	1/1:10,2:11:10.47:74,10,0	0/0:6,0:5:0:0,0,35	0/1:14,4:18:37.86:83,0,38	1/1:29,6:28:2.71:13,3,0	1/1:17,4:19:7.97:74,8,0	1/1:23,0:20:9.59:86,10,0	1/1:18,0:18:7.87:53,8,0	0/0:16,0:16:42.12:0,42,719	1/1:18,0:17:17.01:177,17,0	1/1:26,0:25:4.99:204,5,0	1/1:13,0:13:5.72:177,6,0
chr10	12523299	.	GAC	G	367.65	PASS	AB=0.916;AC=16;AF=0.286;AN=56;BaseQRankSum=3.924;DP=496;FS=0.000;HRun=0;HaplotypeScore=132.1339;InbreedingCoeff=-0.1703;MQ=45.74;MQ0=11;MQRankSum=-1.417;QD=1.49;ReadPosRankSum=-1.514;VQSLOD=2.3159;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:78.13:0,78,1361	1/1:9,1:9:2.94:18,3,0	0/0:18,0:7:14.58:0,15,157	0/0:24,0:9:5.51:0,6,60	0/1:12,1:11:15.74:16,0,60	0/0:17,0:17:1.38:0,1,266	0/0:20,0:20:42.15:0,42,438	0/1:14,6:15:99:151,0,113	0/1:21,1:22:25.10:25,0,185	0/1:23,3:23:20.52:21,0,410	0/0:12,2:14:2.82:0,3,23	0/1:10,3:12:10.95:11,0,74	0/0:15,0:15:21.48:0,21,217	0/1:11,0:11:13.01:13,0,84	0/1:13,0:13:10:10,0,131	0/0:7,0:7:5.36:0,5,109	0/1:18,1:19:20:20,0,99	0/1:10,2:11:32.18:32,0,52	0/1:7,0:6:10.63:11,0,21	0/1:14,4:18:10.85:92,0,11	1/1:30,6:30:6.14:50,6,0	0/0:17,4:19:12.14:0,12,103	0/0:21,0:19:19.70:0,20,205	0/0:20,0:20:10.27:0,10,95	0/0:14,0:14:36.10:0,36,660	0/0:15,0:14:23.65:0,24,215	0/1:25,0:24:51.99:52,0,277	0/0:13,0:13:3.68:0,4,195
chr10	12523301	.	C	CAGAGAGAG	2037.11	PASS	AB=0.997;AC=24;AF=0.429;AN=56;BaseQRankSum=4.658;DP=498;FS=1.813;HRun=0;HaplotypeScore=164.7447;InbreedingCoeff=-0.1059;MQ=46.13;MQ0=11;MQRankSum=-5.206;QD=6.03;ReadPosRankSum=2.064;VQSLOD=2.8709;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:71.08:0,71,1594	0/0:10,0:9:2.91:0,3,22	0/0:19,0:7:3.83:0,4,138	0/0:24,0:10:9.02:0,9,77	1/1:13,0:11:9.34:67,9,0	0/0:18,0:18:33.03:0,33,438	0/0:19,0:19:41.74:0,42,748	1/1:19,0:14:2.11:477,2,0	0/1:23,0:23:24.09:24,0,80	0/1:25,0:22:99:145,0,121	0/0:15,0:15:1.78:0,2,23	0/1:13,0:12:40.82:41,0,55	0/1:16,0:16:18.05:18,0,122	0/1:12,0:12:14.95:22,0,15	0/0:11,0:11:8.44:0,8,71	0/1:7,0:7:4.77:5,0,41	0/1:18,0:18:38.97:39,0,51	0/1:13,0:12:46.17:47,0,46	1/1:1,5:8:24.01:472,24,0	1/1:12,4:18:22.26:312,22,0	1/1:30,5:28:11.34:78,11,0	0/1:21,0:19:3.73:4,0,64	0/1:20,0:19:39.14:39,0,43	0/1:20,0:20:14.29:14,0,30	0/0:14,0:14:33.11:0,33,903	0/1:16,0:15:71.40:91,0,71	0/1:26,0:25:56.16:167,0,56	0/1:13,0:13:80.45:145,0,80
chr10	12524546	.	GT	G	10279.09	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=14.377;DP=521;FS=4.092;HRun=4;HaplotypeScore=72.5264;InbreedingCoeff=0.9959;MQ=75.98;MQ0=0;MQRankSum=-3.214;QD=31.34;ReadPosRankSum=3.915;VQSLOD=5.4084;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:75.22:0,75,1013	1/1:0,9:9:27.08:324,27,0	0/0:20,0:21:44.47:0,44,578	0/0:15,0:15:36.09:0,36,473	1/1:1,20:21:60.18:716,60,0	1/1:1,28:29:66.20:792,66,0	1/1:0,8:8:24.07:288,24,0	0/0:34,0:34:90.29:0,90,1244	1/1:0,15:15:30.09:360,30,0	1/1:0,29:29:87.23:1018,87,0	1/1:1,19:20:56.92:631,57,0	1/1:0,10:10:24.07:288,24,0	1/1:0,9:9:18.06:216,18,0	1/1:0,7:7:21.06:252,21,0	1/1:0,13:13:33.10:396,33,0	1/1:1,17:18:48.02:576,48,0	1/1:0,20:20:60.18:719,60,0	1/1:0,9:9:24.07:288,24,0	0/0:14,0:14:42.09:0,42,565	0/0:43,0:43:99:0,129,1805	0/0:12,0:12:36.12:0,36,503	1/1:2,28:30:78.24:935,78,0	1/1:0,24:24:63.19:754,63,0	1/1:0,13:13:33.10:396,33,0	0/0:27,0:27:78.26:0,78,1091	1/1:1,14:15:39.12:468,39,0	1/1:3,19:22:51.15:612,51,0	1/1:0,7:7:21.06:252,21,0
chr10	12525588	.	G	GA	565.62	PASS	AC=22;AF=0.579;AN=38;BaseQRankSum=4.752;DP=232;FS=1.862;HRun=0;HaplotypeScore=30.3374;InbreedingCoeff=0.7394;MQ=87.71;MQ0=0;MQRankSum=-3.390;QD=20.95;ReadPosRankSum=-6.016;VQSLOD=2.5281;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:81.27:0,81,1132	1/1:0,1:1:3.01:45,3,0	0/0:25,0:24:71.96:0,72,959	0/0:19,0:19:56.97:0,57,714	1/1:3,0:3:2.92:17,3,0	./.	1/1:2,1:3:8.99:111,9,0	0/0:26,0:26:75.24:0,75,1034	1/1:2,1:3:8.88:80,9,0	1/1:1,0:1:2.97:20,3,0	1/1:4,1:5:11.98:136,12,0	./.	./.	1/1:2,0:2:3.01:37,3,0	1/1:1,1:2:5.81:59,6,0	./.	1/1:2,0:2:3:25,3,0	./.	0/0:18,0:18:54.17:0,54,739	0/0:30,0:30:87.28:0,87,1198	0/0:32,0:32:96.31:0,96,1324	./.	1/1:3,0:3:8.96:97,9,0	./.	0/0:21,0:21:63.20:0,63,864	1/1:0,2:2:6.02:93,6,0	./.	./.
chr10	12526029	.	CATA	C	1539.52	PASS	AB=0.500;AC=19;AF=0.528;AN=36;BaseQRankSum=5.959;DP=395;FS=88.617;HRun=0;HaplotypeScore=62.4636;InbreedingCoeff=0.7470;MQ=57.40;MQ0=7;MQRankSum=-8.227;QD=18.11;ReadPosRankSum=1.723;VQSLOD=-0.2078;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:99:0,99,2411	1/1:0,7:7:3.01:55,3,0	0/0:27,0:25:75.26:0,75,1758	0/0:30,0:29:84.29:0,84,2008	1/1:0,13:13:0.87:1,1,0	./.	1/1:0,7:7:3.01:56,3,0	0/0:26,0:26:75.26:0,75,1802	./.	1/1:1,17:16:45.14:808,45,0	./.	./.	1/1:1,10:10:3.01:37,3,0	./.	./.	./.	./.	1/1:0,2:2:3.01:56,3,0	0/0:26,0:26:75.26:0,75,1849	0/0:22,0:22:66.23:0,66,1624	0/0:30,0:30:90.31:0,90,2210	./.	./.	0/1:0,6:6:0:0,0,0	0/0:16,0:16:48.16:0,48,1134	1/1:0,6:6:18.06:335,18,0	1/1:0,9:9:6.02:111,6,0	1/1:0,6:6:12.04:223,12,0
chr10	12526752	.	AGGG	A	1496.08	PASS	AB=0.753;AC=32;AF=0.640;AN=50;BaseQRankSum=0.654;DP=224;FS=13.454;HRun=9;HaplotypeScore=47.5032;InbreedingCoeff=0.4173;MQ=30.96;MQ0=37;MQRankSum=-2.008;QD=13.48;ReadPosRankSum=2.700;VQSLOD=-0.0443;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:8:12.49:0,12,190	./.	0/0:25,0:1:3:0,3,25	0/0:32,0:2:0:0,0,0	./.	0/1:10,0:13:9.08:27,0,9	0/0:3,0:3:2.37:0,2,8	0/0:12,0:10:2.42:0,2,12	1/1:5,4:9:20.90:220,21,0	1/1:0,4:4:12.04:170,12,0	1/1:2,2:4:5.88:54,6,0	1/1:4,0:4:2.98:22,3,0	1/1:1,1:1:3.01:39,3,0	0/1:5,3:8:2.66:126,0,3	1/1:7,4:9:14.94:174,15,0	1/1:3,3:6:11.97:142,12,0	1/1:3,2:4:6.02:79,6,0	1/1:3,0:3:2.04:6,2,0	0/0:5,0:3:1.25:0,1,3	0/0:5,0:5:2.74:0,3,12	1/1:4,0:3:0.89:2,1,0	1/1:0,1:1:3.01:42,3,0	1/1:5,5:9:11.89:115,12,0	./.	0/0:4,0:2:3.01:0,3,42	1/1:4,4:7:12.04:163,12,0	1/1:5,4:9:12.04:167,12,0	1/1:5,3:6:6.02:85,6,0
chr10	12526770	.	A	AT	195.55	PASS	AB=0.883;AC=9;AF=0.196;AN=46;BaseQRankSum=4.839;DP=193;FS=46.310;HRun=0;HaplotypeScore=47.2071;InbreedingCoeff=-0.1788;MQ=29.20;MQ0=44;MQRankSum=-1.006;QD=2.36;ReadPosRankSum=-3.290;VQSLOD=-0.2072;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:4:4.26:0,4,45	./.	./.	0/1:26,0:2:0:0,0,0	./.	0/1:6,3:9:70.01:70,0,81	0/1:7,1:4:28.98:29,0,35	0/1:14,0:9:4.18:4,0,119	0/0:9,0:8:8.59:0,9,149	0/0:7,0:5:15.05:0,15,209	0/1:4,0:4:1.03:1,0,36	0/1:2,0:2:2.59:3,0,36	0/0:3,0:1:3.01:0,3,39	0/1:7,0:6:5.21:5,0,106	0/0:9,0:7:13.43:0,13,225	0/0:5,0:4:5.45:0,5,108	0/0:4,0:3:9:0,9,100	./.	0/1:6,4:8:21.38:153,0,21	0/1:1,1:2:35.65:37,0,36	0/0:2,1:2:1.55:0,2,4	0/0:1,0:1:3.01:0,3,38	0/0:10,0:7:4.07:0,4,151	./.	0/0:3,0:1:3:0,3,27	0/0:7,0:4:8.82:0,9,90	0/0:7,0:7:18.53:0,19,248	0/0:4,0:3:6.02:0,6,76
chr10	12528244	.	TTA	T	928.19	PASS	AC=4;AF=0.200;AN=20;BaseQRankSum=5.439;DP=169;FS=13.290;HRun=0;HaplotypeScore=71.2993;InbreedingCoeff=0.9972;MQ=85.13;MQ0=0;MQRankSum=0.294;QD=33.15;ReadPosRankSum=1.989;VQSLOD=4.8094;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:33.07:0,33,548	./.	0/0:12,0:12:27.09:0,27,464	0/0:15,0:15:36.12:0,36,623	./.	1/1:1,17:18:51.17:701,51,0	1/1:2,8:10:24.08:330,24,0	0/0:33,0:33:93.31:0,93,1624	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	0/0:10,0:10:27.09:0,27,479	0/0:34,0:34:96.33:0,96,1695	0/0:12,0:12:36.12:0,36,630	./.	./.	./.	0/0:14,0:14:39.13:0,39,692	./.	./.	./.
chr10	12528761	.	A	AG	2605.49	PASS	AC=8;AF=0.400;AN=20;BaseQRankSum=-1.887;DP=231;FS=0.000;HRun=6;HaplotypeScore=100.9518;InbreedingCoeff=0.9998;MQ=67.66;MQ0=1;MQRankSum=-1.553;QD=27.14;ReadPosRankSum=1.231;VQSLOD=3.5112;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:72.16:0,72,734	./.	0/0:26,0:23:52.86:0,53,491	0/0:21,0:16:32.80:0,33,281	./.	0/0:28,0:28:84.18:0,84,850	0/0:21,0:21:54.10:0,54,543	1/1:4,17:21:51.15:628,51,0	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	1/1:4,18:22:48.14:588,48,0	1/1:5,14:19:39.12:490,39,0	1/1:3,31:34:81.26:1019,81,0	./.	./.	./.	0/0:12,0:12:33.08:0,33,337	./.	./.	./.
chr10	12529477	.	CT	C	876.10	PASS	AC=6;AF=0.333;AN=18;BaseQRankSum=-0.075;DP=105;FS=6.976;HRun=10;HaplotypeScore=32.4522;MQ=77.95;MQ0=7;MQRankSum=0.432;QD=18.25;ReadPosRankSum=-1.608;VQSLOD=2.9673;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:54.11:0,54,585	./.	0/0:5,0:4:3.01:0,3,33	0/0:9,0:8:14.99:0,15,144	./.	0/0:5,0:4:12.03:0,12,133	0/0:4,0:4:9.02:0,9,100	1/1:6,22:28:62.93:540,63,0	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	1/1:1,11:11:32.99:287,33,0	./.	1/1:2,6:7:17.99:156,18,0	./.	./.	./.	0/0:4,0:4:6.02:0,6,66	./.	./.	./.
chr10	12536547	.	G	GT	16586.81	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=6.349;DP=496;FS=21.242;HRun=1;HaplotypeScore=71.4671;InbreedingCoeff=0.9933;MQ=80.39;MQ0=0;MQRankSum=-5.162;QD=39.97;ReadPosRankSum=3.656;VQSLOD=3.0023;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:96.31:0,96,1244	1/1:0,11:11:21.07:314,21,0	0/0:12,0:12:36.12:0,36,465	0/0:18,0:18:48.12:0,48,596	1/1:1,24:25:69.23:1033,69,0	1/1:0,20:20:57.19:853,57,0	1/1:1,14:15:33.11:495,33,0	1/1:0,20:20:60.19:880,60,0	1/1:0,16:16:42.14:629,42,0	1/1:2,26:28:75.25:1122,75,0	1/1:0,18:18:51.09:713,51,0	1/1:0,12:12:33.11:494,33,0	1/1:2,15:17:48.16:716,48,0	1/1:1,10:11:24.08:360,24,0	1/1:0,14:14:33.11:494,33,0	1/1:0,11:11:30.10:449,30,0	1/1:0,17:17:48.16:719,48,0	1/1:0,13:13:30.10:450,30,0	1/1:1,20:21:60.19:876,60,0	1/1:0,29:29:84.16:1203,84,0	1/1:1,14:15:39.13:584,39,0	1/1:0,12:12:33.11:494,33,0	1/1:1,20:21:54.18:808,54,0	1/1:0,6:6:15.05:225,15,0	0/0:17,0:17:42.13:0,42,532	1/1:0,25:25:72.23:1057,72,0	1/1:0,21:20:57.17:854,57,0	1/1:0,17:17:51.17:764,51,0
chr10	12537339	.	AC	A	3598	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=13.782;DP=583;FS=1.332;HRun=1;HaplotypeScore=71.8517;InbreedingCoeff=0.9986;MQ=70.42;MQ0=1;MQRankSum=3.252;QD=36.34;ReadPosRankSum=-1.128;VQSLOD=3.5507;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,120,1897	0/0:10,0:8:24.08:0,24,372	0/0:24,0:22:60.19:0,60,936	0/0:24,1:24:37.98:0,38,835	0/0:27,0:24:69.23:0,69,1091	0/0:9,0:9:27.09:0,27,429	0/0:15,0:15:45.14:0,45,695	1/1:0,20:20:60.11:757,60,0	0/0:25,0:25:75.26:0,75,1199	0/0:27,0:26:72.24:0,72,1115	0/0:30,0:26:72.25:0,72,1146	0/0:16,0:16:48.16:0,48,767	0/0:17,0:17:51.17:0,51,808	0/0:10,0:10:30.10:0,30,478	0/0:17,0:17:51.17:0,51,813	0/0:12,0:12:36.12:0,36,569	0/0:18,0:18:54.18:0,54,855	0/0:16,0:16:45.13:0,45,693	1/1:0,20:19:57.16:721,57,0	1/1:1,38:39:99:1382,108,0	1/1:2,18:19:57.18:738,57,0	0/0:22,0:21:63.21:0,63,1001	0/0:17,0:12:27.09:0,27,431	0/0:11,0:11:33.09:0,33,502	0/0:22,0:21:66.22:0,66,1048	0/0:22,0:20:57.19:0,57,897	0/0:24,0:24:72.22:0,72,1112	0/0:28,0:27:81.28:0,81,1293
chr10	12537628	.	G	GT	5942.83	PASS	AC=38;AF=0.704;AN=54;BaseQRankSum=14.688;DP=375;FS=35.548;HRun=0;HaplotypeScore=86.8952;InbreedingCoeff=0.9658;MQ=62.50;MQ0=0;MQRankSum=-13.933;QD=28.99;ReadPosRankSum=2.549;VQSLOD=3.0154;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:87.28:0,87,1197	1/1:0,6:4:12.04:163,12,0	0/0:14,0:14:39.01:0,39,428	0/0:5,0:5:12.04:0,12,156	1/1:0,15:11:33.11:448,33,0	1/1:0,9:8:21.07:286,21,0	./.	0/0:28,0:27:78.21:0,78,1025	1/1:1,12:12:36.10:476,36,0	1/1:0,17:15:39.13:545,39,0	1/1:0,19:13:30.10:409,30,0	1/1:0,5:5:15.05:202,15,0	1/1:2,5:7:18.04:219,18,0	1/1:1,8:8:18.06:246,18,0	1/1:0,5:5:15.05:206,15,0	1/1:0,10:7:18.06:246,18,0	1/1:0,7:7:18.05:234,18,0	1/1:0,4:4:12.04:165,12,0	0/0:27,0:26:78.21:0,78,1011	0/0:25,0:25:72.23:0,72,987	0/0:14,0:14:39.12:0,39,528	1/1:0,14:12:36.12:490,36,0	1/1:1,12:8:11.90:118,12,0	1/1:0,8:8:17.92:198,18,0	0/0:21,0:21:59.78:0,60,819	1/1:0,14:11:30.10:418,30,0	1/1:1,14:12:27.02:347,27,0	1/1:0,14:13:39.13:527,39,0
chr10	12537659	.	GA	G	4162.97	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=12.945;DP=373;FS=26.678;HRun=6;HaplotypeScore=82.8399;InbreedingCoeff=0.9575;MQ=52.81;MQ0=0;MQRankSum=-9.826;QD=20.81;ReadPosRankSum=-0.123;VQSLOD=1.9109;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:93.26:0,93,1203	1/1:1,5:4:9.02:96,9,0	0/0:12,0:12:21.07:0,21,272	0/0:6,0:6:14.63:0,15,156	1/1:1,18:15:33.04:338,33,0	0/0:15,0:14:33.11:0,33,434	0/0:9,0:7:12.04:0,12,158	0/0:16,0:16:45.13:0,45,564	1/1:1,10:10:27.07:288,27,0	1/1:0,18:16:48.06:492,48,0	1/1:3,15:12:24.06:257,24,0	1/1:0,5:5:15:149,15,0	1/1:1,8:9:18.04:193,18,0	1/1:1,8:8:21.05:225,21,0	1/1:0,5:5:12.03:129,12,0	1/1:3,9:9:15.01:149,15,0	1/1:0,6:6:12.03:129,12,0	1/1:1,5:6:12.03:128,12,0	0/0:24,0:24:63.20:0,63,815	0/0:28,0:28:84.21:0,84,1057	0/0:13,0:13:36.11:0,36,462	1/1:1,11:10:27.03:277,27,0	1/1:3,11:9:15.04:161,15,0	1/1:3,5:8:14.55:145,15,0	0/0:19,0:19:50.99:0,51,657	1/1:2,14:13:36.04:366,36,0	1/1:3,10:10:24.06:256,24,0	1/1:0,13:12:36.09:386,36,0
chr10	12537848	.	GA	G	1153.44	PASS	AB=0.982;AC=38;AF=0.792;AN=48;BaseQRankSum=6.172;DP=339;FS=1.962;HRun=1;HaplotypeScore=41.6705;InbreedingCoeff=0.3233;MQ=20.65;MQ0=141;MQRankSum=0.550;QD=4.52;ReadPosRankSum=1.028;VQSLOD=0.5169;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:35:48.03:0,48,717	1/1:5,0:2:5.87:35,6,0	./.	./.	0/0:10,0:7:0.47:0,0,1	1/1:9,0:6:5.93:41,6,0	1/1:14,0:6:11.78:73,12,0	0/1:11,0:5:2.25:2,0,51	1/1:5,0:2:5.87:35,6,0	1/1:15,0:6:14.65:90,15,0	1/1:7,0:4:8.87:57,9,0	./.	1/1:11,1:9:20.47:158,20,0	1/1:7,0:4:5.88:36,6,0	1/1:9,0:8:14.53:89,15,0	1/1:8,0:6:11.77:73,12,0	1/1:19,0:5:2.90:16,3,0	./.	0/1:20,0:9:22.40:67,0,22	0/1:12,1:11:1.18:99,0,1	1/1:32,1:1:3:29,3,0	1/1:5,0:5:5.90:37,6,0	1/1:6,1:4:5.90:37,6,0	1/1:19,0:4:8.85:56,9,0	0/0:5,0:4:11.97:0,12,160	1/1:12,0:7:20.26:116,20,0	0/1:19,0:16:3.61:105,0,4	1/1:6,0:4:5.83:33,6,0
chr10	12537849	.	AC	A	2487.33	PASS	AC=42;AF=0.875;AN=48;BaseQRankSum=3.592;DP=315;FS=7.192;HRun=4;HaplotypeScore=34.5858;InbreedingCoeff=0.5066;MQ=20.88;MQ0=132;MQRankSum=-2.345;QD=10.32;ReadPosRankSum=-0.704;VQSLOD=0.0308;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:28:53.95:0,54,666	1/1:3,2:2:6.02:72,6,0	./.	./.	0/0:4,6:6:0.47:0,0,1	1/1:3,5:5:6.02:72,6,0	1/1:8,6:6:12.04:144,12,0	1/1:7,3:4:5.98:57,6,0	1/1:2,3:2:6.02:72,6,0	1/1:8,7:6:15.05:180,15,0	1/1:3,4:4:9.03:108,9,0	./.	1/1:4,8:9:21.06:248,21,0	1/1:2,3:3:6.02:72,6,0	1/1:0,8:8:15.04:180,15,0	1/1:2,6:6:12.04:144,12,0	1/1:13,5:5:3.01:34,3,0	./.	1/1:11,8:8:15.05:179,15,0	1/1:4,7:11:15.04:170,15,0	1/1:30,0:1:3.01:35,3,0	1/1:0,5:5:6.02:72,6,0	1/1:5,2:4:5.98:56,6,0	1/1:14,4:4:9.03:108,9,0	0/0:5,0:4:9.03:0,9,125	1/1:4,7:7:21.06:248,21,0	1/1:5,14:16:24.07:288,24,0	1/1:2,4:4:6.02:72,6,0
chr10	12544169	.	A	AT	713.97	PASS	AB=0.625;AC=15;AF=0.577;AN=26;BaseQRankSum=-0.242;DP=56;FS=1.987;HRun=0;HaplotypeScore=14.0556;InbreedingCoeff=0.3824;MQ=60.49;MQ0=6;MQRankSum=-0.242;QD=24.62;ReadPosRankSum=2.970;VQSLOD=4.1497;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:5:15.05:0,15,209	./.	0/0:2,0:2:0:0,0,0	./.	0/0:2,0:1:0.89:0,1,2	1/1:5,0:3:9.03:101,9,0	./.	0/0:9,0:5:2.98:0,3,21	./.	1/1:0,1:1:3.01:43,3,0	./.	./.	1/1:0,1:1:3.01:45,3,0	./.	./.	1/1:0,1:1:3.01:43,3,0	1/1:0,7:7:18.06:258,18,0	0/1:2,3:4:26.88:115,0,27	0/0:3,0:2:4.53:0,5,25	./.	./.	./.	./.	./.	./.	./.	1/1:0,1:1:3.01:43,3,0	1/1:0,8:8:12.04:171,12,0
chr10	12544398	.	TAA	T	5028.80	PASS	AB=0.556;AC=37;AF=0.685;AN=54;BaseQRankSum=-0.305;DP=365;FS=4.383;HRun=12;HaplotypeScore=61.1363;InbreedingCoeff=0.9074;MQ=47.71;MQ0=7;MQRankSum=-6.150;QD=22.25;ReadPosRankSum=5.126;VQSLOD=4.4299;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:87.17:0,87,1197	1/1:0,4:4:12.03:122,12,0	0/0:10,0:4:6.42:0,6,57	0/0:10,0:5:11.56:0,12,128	1/1:0,11:11:27.04:274,27,0	0/0:4,0:19:40.28:0,40,151	0/1:3,1:15:2.55:3,0,60	0/0:8,0:18:38.90:0,39,386	1/1:2,16:16:45.10:458,45,0	1/1:4,9:12:29.79:286,30,0	1/1:1,6:7:18.03:183,18,0	1/1:3,15:17:39.06:397,39,0	1/1:0,9:9:27.06:274,27,0	1/1:0,7:7:15.02:152,15,0	1/1:1,15:16:42.09:427,42,0	1/1:3,8:10:24.04:244,24,0	1/1:2,13:15:36.03:366,36,0	1/1:2,14:16:29.69:305,30,0	0/0:4,0:19:51.09:0,51,531	./.	0/0:1,0:14:33.04:0,33,321	1/1:0,7:7:21.05:214,21,0	1/1:2,7:9:12:122,12,0	1/1:0,14:15:32.81:317,33,0	0/0:14,0:16:41.55:0,42,514	1/1:2,14:15:42.07:427,42,0	1/1:1,8:8:21.05:214,21,0	1/1:0,9:9:24.05:244,24,0
chr10	12545055	.	A	AAT	8572.36	PASS	AC=46;AF=0.852;AN=54;BaseQRankSum=-5.424;DP=267;FS=16.776;HRun=0;HaplotypeScore=36.3630;InbreedingCoeff=0.8952;MQ=65.37;MQ0=1;MQRankSum=-1.152;QD=38.44;ReadPosRankSum=1.755;VQSLOD=4.7429;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:21:50.43:0,50,655	1/1:0,5:5:15.05:259,15,0	0/0:10,0:9:17.92:0,18,266	0/0:3,0:2:5.12:0,5,20	1/1:1,14:15:36.12:606,36,0	1/1:1,12:13:39.13:659,39,0	1/1:2,6:8:21.04:316,21,0	1/1:21,0:20:54.22:283,54,0	1/1:0,9:9:24.08:384,24,0	1/1:0,14:15:42.08:666,42,0	1/1:0,16:15:39.13:674,39,0	1/1:0,7:7:21.07:363,21,0	1/1:0,4:4:12.04:207,12,0	1/1:0,7:7:18.06:311,18,0	1/1:0,7:7:21.07:363,21,0	1/1:0,9:9:18.06:311,18,0	1/1:0,9:9:27.09:467,27,0	1/1:0,10:9:24.08:414,24,0	1/1:9,0:9:22.51:114,23,0	./.	1/1:6,0:6:14.20:71,14,0	1/1:0,3:4:9.03:141,9,0	1/1:0,6:7:15.05:260,15,0	1/1:2,4:7:8.86:86,9,0	0/0:9,0:9:21.02:0,21,295	1/1:1,6:7:18.06:311,18,0	1/1:0,9:9:24.08:415,24,0	1/1:2,17:19:47.36:890,47,0
chr10	12545056	.	A	AT	4034.26	PASS	AC=46;AF=0.852;AN=54;BaseQRankSum=3.464;DP=263;FS=19.185;HRun=0;HaplotypeScore=47.0739;InbreedingCoeff=0.8814;MQ=65.90;MQ0=1;MQRankSum=-2.848;QD=18.42;ReadPosRankSum=2.701;VQSLOD=3.8225;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:21:51.70:0,52,615	1/1:5,0:5:14.62:86,15,0	0/0:10,0:9:23.63:0,24,266	0/0:3,0:2:5.12:0,5,22	1/1:15,0:15:35.18:225,35,0	1/1:12,0:12:35.11:207,35,0	1/1:8,0:8:18.26:95,18,0	1/1:1,19:19:57.10:749,57,0	1/1:9,0:9:23.57:176,24,0	1/1:15,0:15:29.42:216,29,0	1/1:15,0:14:38.02:224,38,0	1/1:7,0:7:20.47:121,20,0	1/1:4,0:4:11.70:69,12,0	1/1:6,0:6:17.55:104,18,0	1/1:7,0:7:20.47:121,20,0	1/1:9,0:9:17.55:103,18,0	1/1:10,0:10:26.31:155,26,0	1/1:10,0:9:23.40:137,23,0	1/1:0,9:9:24.08:335,24,0	./.	1/1:0,7:7:15.05:209,15,0	1/1:4,0:4:8.78:52,9,0	1/1:7,0:7:14.62:86,15,0	1/1:6,0:6:5.85:34,6,0	0/0:9,0:9:21.03:0,21,271	1/1:6,0:6:17.55:104,18,0	1/1:9,0:9:23.40:138,23,0	1/1:19,0:19:38.72:287,39,0
chr10	12545792	.	TA	T	9663.93	PASS	AC=42;AF=0.778;AN=54;BaseQRankSum=0.717;DP=513;FS=2.079;HRun=9;HaplotypeScore=56.9158;InbreedingCoeff=0.9732;MQ=73.60;MQ0=0;MQRankSum=-0.997;QD=23.40;ReadPosRankSum=0.421;VQSLOD=5.6585;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,105,1184	1/1:1,6:7:18.01:165,18,0	0/0:15,0:15:22.83:0,23,221	0/0:6,0:5:6.89:0,7,56	1/1:1,23:24:68.83:617,69,0	0/0:5,0:20:51.75:0,52,316	0/0:2,0:13:25.57:0,26,130	1/1:1,19:20:56.90:495,57,0	1/1:1,22:23:63.03:576,63,0	1/1:3,24:27:48.69:627,49,0	1/1:3,22:25:62.95:566,63,0	1/1:0,15:15:39.02:357,39,0	1/1:0,21:21:51.03:467,51,0	1/1:1,15:16:39.02:357,39,0	1/1:3,12:15:33.02:302,33,0	1/1:2,13:15:36.02:329,36,0	1/1:1,26:27:66.03:604,66,0	1/1:0,8:8:18.01:165,18,0	1/1:4,14:18:45:407,45,0	./.	1/1:1,20:21:54.03:494,54,0	1/1:1,16:17:41.94:373,42,0	1/1:1,23:24:65.72:603,66,0	1/1:2,18:20:51.03:467,51,0	0/0:9,0:9:21.06:0,21,240	1/1:2,25:27:71.99:651,72,0	1/1:2,35:37:98.81:906,99,0	1/1:0,6:6:15.01:137,15,0
chr10	12546278	.	AAC	A	1572.29	PASS	AB=0.895;AC=38;AF=0.760;AN=50;BaseQRankSum=4.375;DP=500;FS=9.010;HRun=0;HaplotypeScore=70.9901;InbreedingCoeff=-0.0938;MQ=68.60;MQ0=17;MQRankSum=-0.061;QD=4.36;ReadPosRankSum=3.308;VQSLOD=0.9813;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:41,0:40:15.58:16,0,478	0/1:3,2:6:7.02:68,0,7	./.	0/0:55,0:28:0:0,0,0	0/1:14,3:16:17.90:27,0,18	1/1:7,0:11:5.34:23,5,0	1/1:18,0:22:6.57:30,7,0	./.	0/1:8,0:11:10.10:55,0,10	1/1:17,3:21:21.83:169,22,0	1/1:10,7:17:13.13:103,13,0	1/1:3,1:5:5.85:47,6,0	1/1:4,3:6:9.02:98,9,0	0/1:8,0:8:32.75:54,0,33	1/1:8,4:12:14.71:126,15,0	0/1:6,0:6:26.60:27,0,39	1/1:13,8:21:9.02:98,9,0	0/1:11,0:10:7.29:25,0,7	0/0:11,0:10:3:0,3,28	./.	1/1:25,0:30:2.82:25,3,0	1/1:14,4:17:6.44:52,6,0	1/1:14,2:18:20.72:191,21,0	1/1:10,10:22:11.69:93,12,0	0/1:15,3:16:42.65:43,0,185	1/1:6,10:16:26.61:228,27,0	1/1:13,1:14:11.93:96,12,0	1/1:4,0:5:2.84:14,3,0
chr10	12548364	.	TGC	T	1235.18	PASS	AB=0.989;AC=25;AF=0.463;AN=54;BaseQRankSum=10.638;DP=501;FS=3.310;HRun=0;HaplotypeScore=115.3923;InbreedingCoeff=-0.2400;MQ=57.78;MQ0=41;MQRankSum=-1.844;QD=4.04;ReadPosRankSum=7.592;VQSLOD=1.5254;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:93.40:0,93,1632	0/1:7,0:7:18.27:53,0,18	0/0:41,0:13:2.20:0,2,157	0/0:48,0:19:10.91:0,11,268	0/1:23,0:16:47.49:47,0,68	0/1:9,0:9:30.37:30,0,55	1/1:14,0:14:6.08:110,6,0	0/0:20,0:20:60.17:0,60,1035	0/1:20,1:17:46.97:61,0,47	1/1:17,0:14:0.40:117,0,0	0/1:23,0:18:60.33:60,0,91	0/1:15,0:13:58.19:58,0,71	0/1:15,0:14:62.51:63,0,73	0/1:11,0:8:31.44:31,0,34	1/1:18,0:16:16.85:78,17,0	0/1:18,0:17:67.07:83,0,67	0/1:13,0:9:34.86:35,0,35	0/1:11,0:10:16.84:116,0,17	0/0:15,0:15:34.11:0,34,576	./.	0/0:29,0:27:34.50:0,35,916	0/1:7,0:6:5.86:6,0,21	0/1:17,0:11:23.48:23,0,122	0/1:25,1:19:51.19:60,0,51	0/0:9,0:9:18.94:0,19,331	0/1:10,1:10:19.35:119,0,19	1/1:22,2:23:3.76:231,4,0	1/1:6,0:3:2.84:14,3,0
chr10	12548365	.	GCA	G	4532.92	PASS	AB=0.923;AC=41;AF=0.759;AN=54;BaseQRankSum=4.604;DP=507;FS=7.626;HRun=0;HaplotypeScore=108.3320;InbreedingCoeff=0.7774;MQ=57.04;MQ0=43;MQRankSum=0.666;QD=14.30;ReadPosRankSum=4.262;VQSLOD=4.4176;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:92.97:0,93,1462	1/1:3,3:7:8.10:140,8,0	0/0:43,0:14:15.47:0,15,168	0/0:52,0:19:14.99:0,15,172	1/1:7,16:16:18.04:225,18,0	1/1:10,2:12:10.03:150,10,0	1/1:4,10:14:30.10:375,30,0	0/0:21,0:21:48.16:0,48,766	1/1:10,12:18:12.04:215,12,0	1/1:8,9:14:35.38:387,35,0	1/1:9,13:17:21.07:262,21,0	1/1:6,8:12:17.89:224,18,0	1/1:9,6:14:20.03:240,20,0	1/1:6,5:8:11.62:119,12,0	1/1:3,15:16:18.05:225,18,0	1/1:4,13:16:24:284,24,0	1/1:7,6:9:9.03:112,9,0	1/1:3,8:10:24.08:299,24,0	0/1:11,1:12:10.46:10,0,324	./.	0/0:28,1:27:10.65:0,11,705	1/1:2,4:5:5.70:60,6,0	1/1:10,6:10:8.10:142,8,0	1/1:15,11:19:13.86:218,14,0	0/0:9,0:9:18.05:0,18,274	1/1:4,7:10:24.03:283,24,0	1/1:6,18:23:26.18:525,26,0	1/1:1,5:3:3.01:38,3,0
chr10	12548384	.	G	GCACA	4092.93	PASS	AC=42;AF=0.875;AN=48;BaseQRankSum=2.153;DP=558;FS=4.156;HRun=0;HaplotypeScore=160.2603;InbreedingCoeff=0.5656;MQ=41.22;MQ0=51;MQRankSum=-2.395;QD=11.12;ReadPosRankSum=-0.352;VQSLOD=3.1232;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:39:22.20:0,22,697	1/1:6,1:9:17.72:270,18,0	./.	./.	1/1:19,6:19:12.01:162,12,0	1/1:15,0:14:9.48:95,9,0	1/1:18,0:17:5.85:91,6,0	1/1:19,0:23:2.32:8,2,0	1/1:15,6:18:14.41:225,14,0	1/1:16,3:17:13.08:245,13,0	1/1:15,3:13:2.99:42,3,0	1/1:11,2:12:8.67:60,9,0	1/1:9,3:11:13.41:266,13,0	1/1:9,2:9:2.60:10,3,0	1/1:16,7:23:10.96:123,11,0	1/1:6,7:13:11.78:221,12,0	1/1:11,5:12:18.06:364,18,0	1/1:10,2:11:20.97:318,21,0	0/0:8,0:11:7.43:0,7,47	./.	./.	1/1:11,2:12:3.48:50,3,0	1/1:10,1:8:3.01:43,3,0	1/1:23,1:21:5.59:83,6,0	0/0:10,0:10:12.03:0,12,171	1/1:11,6:17:33.06:638,33,0	1/1:17,10:27:44.84:756,45,0	1/1:8,0:4:2.98:22,3,0
chr10	12548438	.	TA	T	5312.61	PASS	AC=36;AF=0.667;AN=54;BaseQRankSum=8.776;DP=444;FS=5.902;HRun=8;HaplotypeScore=108.5822;InbreedingCoeff=0.9779;MQ=56.60;MQ0=2;MQRankSum=-2.955;QD=20.43;ReadPosRankSum=2.988;VQSLOD=4.2393;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:90.73:0,91,1067	1/1:2,6:8:15.02:145,15,0	0/0:20,0:14:20.85:0,21,168	0/0:20,0:13:9.10:0,9,165	1/1:3,19:22:50.33:472,50,0	0/0:15,0:14:37:0,37,436	0/0:12,0:11:23.72:0,24,246	0/0:30,0:30:78.15:0,78,902	1/1:4,16:20:35.61:323,36,0	1/1:2,17:18:53.98:497,54,0	1/1:0,6:6:15.02:144,15,0	1/1:2,7:9:21.03:203,21,0	1/1:1,9:10:18.03:174,18,0	1/1:0,11:11:30.05:289,30,0	1/1:9,9:18:19.55:250,20,0	1/1:6,10:16:30.04:290,30,0	1/1:2,15:17:39.01:367,39,0	1/1:2,7:9:21.03:202,21,0	0/0:21,0:22:57.14:0,57,648	./.	0/0:10,0:10:30.08:0,30,348	1/1:5,8:13:29.80:268,30,0	1/1:1,12:13:33.05:318,33,0	1/1:5,14:19:23.83:271,24,0	0/0:16,0:16:45.14:0,45,539	1/1:3,14:17:44.91:398,45,0	1/1:5,21:26:59.99:558,60,0	1/1:2,5:7:15.02:144,15,0
chr10	12551051	.	C	CA	2103.16	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-10.268;DP=601;FS=10.732;HRun=2;HaplotypeScore=74.5872;InbreedingCoeff=0.9357;MQ=72.73;MQ0=1;MQRankSum=-1.635;QD=33.38;ReadPosRankSum=-3.444;VQSLOD=1.5671;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:84.22:0,84,1022	0/0:15,0:15:42.13:0,42,521	0/0:27,0:18:41.15:0,41,482	0/0:32,0:29:78.15:0,78,911	0/0:34,0:34:99:0,99,1201	0/0:24,0:24:66.19:0,66,805	0/0:18,0:18:51.16:0,51,632	1/1:4,14:17:45.15:644,45,0	0/0:20,0:20:51.15:0,51,620	0/0:25,0:25:66.21:0,66,817	0/0:21,0:21:60.19:0,60,743	0/0:13,0:13:39.12:0,39,483	0/0:20,0:20:60.19:0,60,744	0/0:10,0:10:30.09:0,30,371	0/0:21,0:21:60.19:0,60,744	0/0:13,0:13:39.12:0,39,484	0/0:28,0:27:78.25:0,78,966	0/0:20,0:20:54.17:0,54,669	1/1:1,21:22:63.20:890,63,0	1/1:0,0:3:1.41:28,1,0	1/1:0,18:18:48.16:691,48,0	0/0:31,0:31:90.27:0,90,1103	0/0:19,0:19:51.15:0,51,619	0/0:18,0:18:51.16:0,51,632	0/0:20,0:20:57.16:0,57,692	0/0:25,0:25:75.22:0,75,908	0/0:39,0:39:99:0,108,1338	0/0:11,0:11:33.10:0,33,409
chr10	12551937	.	TG	T	12751.45	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=6.635;DP=599;FS=2.286;HRun=8;HaplotypeScore=87.9464;InbreedingCoeff=0.9986;MQ=64.92;MQ0=1;MQRankSum=-1.063;QD=24.38;ReadPosRankSum=3.720;VQSLOD=5.4595;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,99,1159	1/1:0,10:10:30.05:290,30,0	0/0:14,0:14:42.01:0,42,432	0/0:15,0:14:30.07:0,30,340	1/1:2,28:30:81.13:782,81,0	1/1:0,19:19:45.07:435,45,0	1/1:1,18:19:39.06:376,39,0	1/1:8,33:41:96.13:917,96,0	1/1:2,16:18:45.07:434,45,0	1/1:3,20:23:63.10:608,63,0	1/1:2,18:20:51.08:490,51,0	1/1:0,15:15:39.06:377,39,0	1/1:0,10:10:30.05:290,30,0	1/1:0,15:15:42.07:406,42,0	1/1:0,13:13:30.05:290,30,0	1/1:1,8:9:24.04:232,24,0	1/1:1,20:21:60.10:579,60,0	1/1:3,24:27:66.10:637,66,0	1/1:3,20:23:60.09:579,60,0	1/1:5,17:22:48.07:463,48,0	1/1:9,57:66:99:1564,162,0	1/1:2,21:22:57.04:541,57,0	1/1:1,21:22:60.10:579,60,0	1/1:0,19:19:54.09:521,54,0	0/0:12,0:12:33.09:0,33,388	1/1:2,13:15:39.06:377,39,0	1/1:2,24:26:69.11:666,69,0	1/1:3,14:17:33.05:319,33,0
chr10	12552071	.	TA	T	7453.55	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-7.497;DP=512;FS=0.734;HRun=9;HaplotypeScore=64.9133;InbreedingCoeff=0.9879;MQ=70.02;MQ0=0;MQRankSum=-2.294;QD=24.44;ReadPosRankSum=7.222;VQSLOD=4.4394;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:51.15:0,51,588	1/1:1,8:9:24.01:220,24,0	0/0:15,0:15:26.74:0,27,281	0/0:5,0:5:8.26:0,8,59	1/1:3,19:22:57.03:522,57,0	0/0:16,0:16:39.11:0,39,449	0/0:7,0:7:21.06:0,21,242	0/0:8,0:43:99:0,105,588	1/1:1,9:10:27.01:247,27,0	1/1:1,25:26:69.01:628,69,0	1/1:1,28:29:78.03:714,78,0	1/1:0,14:14:42.02:384,42,0	1/1:0,11:11:33.02:302,33,0	1/1:1,10:11:30.01:274,30,0	1/1:0,9:9:27.01:247,27,0	1/1:1,9:10:24.01:220,24,0	1/1:1,21:22:57.03:522,57,0	1/1:2,13:15:39.02:357,39,0	0/0:6,0:39:99:0,104,551	0/0:2,0:20:51.29:0,51,265	0/0:4,0:30:68.36:0,68,356	1/1:3,13:16:39.02:357,39,0	1/1:2,24:26:69.03:631,69,0	1/1:1,12:13:33.02:302,33,0	0/0:13,0:13:36.11:0,36,415	1/1:0,17:17:50.99:456,51,0	1/1:3,29:32:84.04:769,84,0	1/1:1,12:13:33.02:302,33,0
chr10	12552425	.	C	CTTGTTTGT	19438.58	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-6.728;DP=480;FS=0.663;HRun=0;HaplotypeScore=97.2035;InbreedingCoeff=0.7836;MQ=54.04;MQ0=1;MQRankSum=-7.238;QD=47.18;ReadPosRankSum=-0.363;VQSLOD=4.4733;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:56.20:0,56,1324	1/1:3,3:7:12.04:487,12,0	0/0:14,0:11:12.03:0,12,225	0/0:11,0:9:7.87:0,8,305	1/1:4,10:16:36.08:1251,36,0	1/1:9,12:21:30.10:1178,30,0	1/1:4,6:15:21.03:717,21,0	1/1:65,0:66:87.22:1561,87,0	1/1:8,15:24:27.09:1121,27,0	1/1:6,4:11:17.95:582,18,0	1/1:5,10:16:21.03:767,21,0	1/1:5,5:11:3.01:125,3,0	1/1:3,9:12:24.08:948,24,0	1/1:3,14:18:33.11:1251,33,0	1/1:3,7:11:18.06:747,18,0	1/1:4,7:11:15.05:623,15,0	1/1:7,11:19:24.08:920,24,0	1/1:14,0:14:12.88:321,13,0	1/1:15,9:27:37.35:1172,37,0	1/1:2,15:17:45.12:1676,45,0	1/1:8,4:16:6.02:249,6,0	1/1:2,3:5:12:390,12,0	1/1:8,7:16:18.06:697,18,0	1/1:2,8:11:3.01:74,3,0	0/0:10,0:11:27.09:0,27,644	1/1:5,8:15:33.11:1211,33,0	1/1:7,14:23:30.10:1246,30,0	1/1:5,3:9:3.01:125,3,0
chr10	12552636	.	A	AAT	99.48	PASS	AB=0.894;AC=6;AF=0.107;AN=56;BaseQRankSum=4.666;DP=258;FS=10.075;HRun=0;HaplotypeScore=50.4241;InbreedingCoeff=0.1094;MQ=59.52;MQ0=1;MQRankSum=-3.853;QD=2.62;ReadPosRankSum=-0.307;VQSLOD=0.3056;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:34.99:0,35,533	1/1:0,1:1:3.01:50,3,0	0/0:13,0:11:27.07:0,27,353	0/0:6,0:5:9.50:0,10,134	0/0:6,0:6:16.61:0,17,232	0/0:11,0:11:27.09:0,27,413	0/0:3,0:4:9.92:0,10,133	0/0:53,0:53:99:0,130,1860	0/0:3,0:3:7.27:0,7,94	0/1:5,1:6:34.76:35,0,169	0/0:10,0:10:27.13:0,27,354	0/0:3,0:3:9.03:0,9,136	0/0:3,0:3:9.03:0,9,137	0/0:3,0:3:7.58:0,8,95	0/0:9,0:9:17.18:0,17,233	0/0:2,0:2:6.02:0,6,92	0/1:15,1:16:38.15:38,0,504	0/0:11,0:11:18.64:0,19,227	0/0:25,0:25:49.67:0,50,749	0/0:5,0:5:12.04:0,12,170	0/0:8,0:8:21.06:0,21,301	0/0:6,0:6:15.05:0,15,230	0/0:9,0:9:27.08:0,27,395	0/0:1,0:1:1.82:0,2,5	0/0:6,0:6:18.06:0,18,275	0/1:5,2:7:82.54:83,0,166	0/1:8,0:8:11.09:11,0,237	0/0:7,0:6:15.32:0,15,188
chr10	12552642	.	A	AAAATAAAT	4343.68	PASS	AC=40;AF=0.870;AN=46;BaseQRankSum=3.371;DP=254;FS=4.265;HRun=0;HaplotypeScore=72.9654;InbreedingCoeff=0.4496;MQ=55.22;MQ0=1;MQRankSum=-5.593;QD=21.72;ReadPosRankSum=-3.147;VQSLOD=2.3803;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:30.10:0,30,711	1/1:0,0:1:3.01:51,3,0	0/0:9,0:7:3.01:0,3,43	./.	1/1:5,0:5:2.99:24,3,0	1/1:9,4:14:6.02:160,6,0	1/1:3,0:3:3.01:76,3,0	1/1:58,0:57:69.21:1494,69,0	1/1:3,0:3:5.61:112,6,0	1/1:5,0:6:5.98:78,6,0	1/1:9,0:9:6.02:106,6,0	./.	1/1:3,0:3:3.01:118,3,0	1/1:4,0:4:6:79,6,0	1/1:8,0:8:11.01:197,11,0	./.	1/1:11,0:15:11.93:360,12,0	1/1:10,0:11:14.55:254,15,0	1/1:24,2:25:29.81:578,30,0	1/1:2,0:4:3.01:104,3,0	1/1:9,0:9:9.02:112,9,0	./.	./.	1/1:1,0:1:2.98:22,3,0	0/0:6,0:6:15.05:0,15,376	1/1:5,0:7:9:124,9,0	1/1:8,0:8:8.96:183,9,0	1/1:5,0:4:5.23:111,5,0
chr10	12552677	.	A	AT	32.28	PASS	AB=0.895;AC=8;AF=0.148;AN=54;BaseQRankSum=6.361;DP=256;FS=0.000;HRun=0;HaplotypeScore=51.2196;InbreedingCoeff=-0.1635;MQ=58.54;MQ0=1;MQRankSum=-4.431;QD=0.62;ReadPosRankSum=-0.306;VQSLOD=0.8512;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:54.16:0,54,721	0/1:4,0:4:1.36:1,0,39	0/0:5,0:3:9.02:0,9,112	0/0:3,0:3:5.99:0,6,63	0/0:8,0:8:17.54:0,18,115	0/1:9,0:9:25.05:25,0,214	0/1:4,0:4:4.04:4,0,114	0/0:55,0:55:99:0,131,2032	0/1:3,1:4:18.07:18,0,46	0/0:4,0:4:6.59:0,7,46	0/0:6,0:6:17.69:0,18,117	0/0:2,0:2:2.82:0,3,16	0/1:1,1:2:11.01:33,0,11	0/0:6,0:6:14.77:0,15,100	0/1:5,1:6:21.93:22,0,91	0/0:2,0:2:2.84:0,3,17	0/1:12,3:15:43.49:43,0,84	0/0:9,0:9:26.67:0,27,181	0/0:26,0:25:60.30:0,60,825	0/0:7,0:7:14.99:0,15,177	0/0:13,0:13:36.06:0,36,439	./.	0/0:5,0:5:11.59:0,12,66	0/0:4,0:4:11.81:0,12,78	0/0:11,0:11:33.10:0,33,433	0/1:8,0:8:4.07:4,0,74	0/0:8,1:9:12.83:0,13,149	0/0:8,1:9:8.91:0,9,117
chr10	12553634	.	ACTGTTTGTGGAAGCT	A	1031.33	PASS	AB=0.990;AC=17;AF=0.304;AN=56;BaseQRankSum=8.123;DP=622;FS=9.919;HRun=0;HaplotypeScore=358.0712;InbreedingCoeff=0.0876;MQ=81.45;MQ0=0;MQRankSum=-8.067;QD=4.43;ReadPosRankSum=-2.169;VQSLOD=0.2696;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,129,8477	0/0:5,0:5:1.03:0,1,3	0/0:28,0:27:75.24:0,75,4105	0/0:38,0:37:99:0,107,5909	0/1:18,0:18:25.97:190,0,26	0/0:10,0:10:30.10:0,30,1990	0/0:13,0:13:39.13:0,39,2683	0/0:44,0:44:99:0,132,8665	0/1:26,0:26:55.38:105,0,55	1/1:18,0:18:25.56:148,26,0	0/1:15,1:15:30.44:75,0,30	0/1:11,0:11:8.18:40,0,8	0/0:13,0:13:15.81:0,16,48	0/0:14,0:14:21.60:0,22,57	0/1:16,0:16:10.68:111,0,11	0/1:16,0:16:20.28:58,0,20	0/1:20,0:20:13.11:105,0,13	1/1:8,0:8:10.15:86,10,0	0/0:44,0:44:99:0,132,8091	0/0:27,0:27:81.28:0,81,5171	0/0:82,0:82:99:0,247,15237	0/1:33,2:35:44.66:189,0,45	0/0:17,1:18:10.11:0,10,30	0/1:9,0:9:22.16:22,0,25	0/0:10,0:10:27.09:0,27,1723	0/1:16,0:16:13.95:14,0,36	0/1:16,0:15:2.38:5,0,2	1/1:8,0:8:3.02:49,3,0
chr10	12553635	.	CTGTTTGTG	C	11525.53	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=18.673;DP=556;FS=15.987;HRun=0;HaplotypeScore=215.7109;InbreedingCoeff=0.9873;MQ=88.17;MQ0=0;MQRankSum=-18.211;QD=55.15;ReadPosRankSum=8.736;VQSLOD=3.0798;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,129,5806	1/1:0,4:4:12.04:260,12,0	0/0:29,0:28:84.23:0,84,3373	0/0:38,0:37:99:0,107,4207	1/1:0,14:17:30.06:457,30,0	0/0:10,0:10:30.10:0,30,1387	0/0:13,0:13:39.13:0,39,1779	0/0:46,0:46:99:0,138,5891	1/1:3,15:18:51.16:979,51,0	1/1:1,11:12:36.12:834,36,0	1/1:1,10:11:33.11:589,33,0	1/1:1,7:8:24.07:469,24,0	1/1:0,9:9:27.09:564,27,0	1/1:0,12:12:36.12:734,36,0	1/1:2,12:14:42.13:802,42,0	1/1:1,12:13:39.13:791,39,0	1/1:1,13:14:39.01:682,39,0	1/1:1,4:5:11.68:254,12,0	0/0:48,0:48:99:0,144,6155	0/0:27,0:27:81.28:0,81,3594	0/0:82,0:82:99:0,247,10396	1/1:2,24:26:72.20:1342,72,0	1/1:1,7:8:21.07:428,21,0	1/1:0,7:7:21.03:375,21,0	0/0:11,0:11:30.09:0,30,1331	1/1:0,12:13:38.49:817,38,0	1/1:0,12:12:36.12:779,36,0	1/1:1,5:6:18.06:371,18,0
chr10	12553646	.	A	ACAG	10686.06	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=18.279;DP=569;FS=9.728;HRun=0;HaplotypeScore=195.5506;InbreedingCoeff=0.9884;MQ=88.33;MQ0=0;MQRankSum=-18.454;QD=42.92;ReadPosRankSum=8.569;VQSLOD=4.8884;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,126,1976	1/1:1,4:5:15.05:258,15,0	0/0:29,0:28:68.52:0,69,1308	0/0:34,0:35:88.09:0,88,1396	1/1:9,14:23:24.07:358,24,0	0/0:9,0:9:24.07:0,24,416	0/0:15,0:15:45.14:0,45,789	0/0:44,0:44:99:0,123,2180	1/1:5,15:20:57.64:946,58,0	1/1:3,11:14:42.14:779,42,0	1/1:3,10:13:30.10:473,30,0	1/1:1,7:8:24.08:416,24,0	1/1:3,9:12:36.12:620,36,0	1/1:2,12:14:42.14:687,42,0	1/1:2,12:14:42.14:674,42,0	1/1:0,12:12:36.12:585,36,0	1/1:6,13:19:48.16:811,48,0	1/1:3,4:7:12.04:249,12,0	0/0:46,0:46:99:0,135,2403	0/0:23,0:23:63.13:0,63,1044	0/0:61,0:61:99:0,178,3161	1/1:4,24:28:66.18:1013,66,0	1/1:4,7:11:30.10:513,30,0	1/1:3,7:10:18.06:269,18,0	0/0:12,0:12:33.05:0,33,519	1/1:4,12:16:48.16:894,48,0	1/1:5,12:16:51.17:890,51,0	1/1:1,5:6:15.05:251,15,0
chr10	12555994	.	AATGCCAAGCAACC	A	84.78	PASS	AB=0.931;AC=3;AF=0.060;AN=50;BaseQRankSum=0.062;DP=569;FS=3.729;HRun=0;HaplotypeScore=97.9810;InbreedingCoeff=0.3522;MQ=25.12;MQ0=318;MQRankSum=-2.120;QD=2.23;ReadPosRankSum=-0.597;VQSLOD=1.7313;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:69,0:25:69.24:0,69,3793	0/0:6,0:5:15.05:0,15,888	./.	./.	0/0:11,0:10:30.10:0,30,1631	0/0:15,0:5:12.04:0,12,671	0/0:19,0:4:12.04:0,12,469	./.	0/0:30,0:11:33.10:0,33,1604	0/0:7,0:5:15.05:0,15,1000	0/0:11,0:11:27.09:0,27,1408	0/0:18,0:6:18.06:0,18,1004	0/0:24,0:7:15.05:0,15,1000	0/0:20,0:5:12.04:0,12,723	0/0:19,0:8:21.07:0,21,1201	0/0:26,0:7:18.06:0,18,903	0/0:33,0:20:45.15:0,45,2692	0/0:27,0:9:24.08:0,24,1429	0/1:25,2:3:52.60:53,0,192	1/1:4,7:4:3.01:123,3,0	0/0:30,6:7:6.02:0,6,360	0/0:14,0:10:30.10:0,30,1883	0/0:8,0:8:15.05:0,15,998	0/0:32,0:13:33.11:0,33,1498	0/0:6,0:5:15.05:0,15,993	0/0:33,0:13:36.12:0,36,2188	0/0:29,0:9:18.06:0,18,941	0/0:7,0:3:9.03:0,9,601
chr10	12556310	.	TA	T	1201.70	PASS	AB=0.952;AC=12;AF=0.231;AN=52;BaseQRankSum=-4.258;DP=268;FS=3.302;HRun=8;HaplotypeScore=41.9032;InbreedingCoeff=0.6145;MQ=59.28;MQ0=14;MQRankSum=0.978;QD=10.83;ReadPosRankSum=-1.777;VQSLOD=1.3315;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:42.11:0,42,494	./.	0/1:20,0:2:3.94:4,0,21	0/1:16,1:6:10.66:11,0,53	0/0:11,0:10:21.71:0,22,136	1/1:10,0:10:10.31:53,10,0	./.	1/1:7,15:20:45.06:432,45,0	0/0:2,0:2:5.99:0,6,48	0/0:18,0:18:50.79:0,51,460	0/0:7,0:6:5.73:0,6,35	0/0:2,0:2:5.67:0,6,37	0/0:4,0:4:8.04:0,8,35	0/0:4,0:4:11.66:0,12,85	0/0:5,0:5:13.85:0,14,82	0/0:3,0:3:5.99:0,6,49	0/0:19,0:16:41.11:0,41,304	0/0:14,0:12:23.75:0,24,175	1/1:4,11:12:33.05:318,33,0	1/1:1,13:14:36.06:347,36,0	1/1:4,7:10:5.97:199,6,0	0/0:3,0:2:3:0,3,25	0/0:2,0:2:5.74:0,6,36	0/0:4,0:2:5.98:0,6,47	0/0:11,0:11:22.41:0,22,312	0/0:13,0:13:35.53:0,36,305	0/0:15,0:15:28.45:0,28,186	0/0:5,0:4:11.92:0,12,88
chr10	12556319	.	TA	T	2612.24	PASS	AB=1.000;AC=37;AF=0.685;AN=54;BaseQRankSum=-2.650;DP=308;FS=1.721;HRun=9;HaplotypeScore=40.6588;InbreedingCoeff=0.8109;MQ=58.68;MQ0=14;MQRankSum=-2.026;QD=15.10;ReadPosRankSum=2.291;VQSLOD=3.3089;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:45.13:0,45,516	1/1:2,0:2:6:55,6,0	0/1:28,0:4:3.06:3,0,54	0/0:23,0:8:15.95:0,16,134	1/1:0,10:10:23.98:213,24,0	0/0:9,0:9:14.70:0,15,99	./.	0/0:23,0:21:41.27:0,41,351	1/1:0,4:4:9:82,9,0	1/1:3,17:20:27.07:432,27,0	1/1:2,6:7:9:81,9,0	1/1:0,2:2:6:55,6,0	1/1:0,5:5:8.84:82,9,0	1/1:0,4:4:12.01:110,12,0	1/1:0,6:6:15.01:137,15,0	1/1:0,3:3:6:55,6,0	1/1:3,15:16:39.02:357,39,0	1/1:3,12:13:24.01:220,24,0	0/0:21,0:19:56.70:0,57,518	0/0:16,0:16:36.32:0,36,224	0/0:16,0:15:38.87:0,39,337	1/1:0,6:6:9:82,9,0	1/1:0,2:2:6:54,6,0	1/1:1,2:2:6:55,6,0	0/0:11,0:11:21:0,21,269	1/1:2,13:15:36.02:329,36,0	1/1:1,13:14:29.85:274,30,0	1/1:1,6:7:15.01:137,15,0
chr10	12556615	.	CT	C	2846.94	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=11.214;DP=594;FS=15.391;HRun=2;HaplotypeScore=63.1935;InbreedingCoeff=0.9354;MQ=48.00;MQ0=21;MQRankSum=-4.249;QD=20.48;ReadPosRankSum=1.193;VQSLOD=2.2962;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:69.10:0,69,921	0/0:5,0:5:12.04:0,12,178	0/0:14,0:3:6.02:0,6,90	0/0:12,0:3:9.03:0,9,135	0/0:25,0:25:51.15:0,51,725	0/0:33,0:28:51.12:0,51,718	0/0:15,0:10:14.81:0,15,223	1/1:4,26:8:24.04:281,24,0	0/0:15,0:14:27.09:0,27,404	0/0:30,0:26:78.25:0,78,1147	0/0:22,0:20:21.06:0,21,294	0/0:13,0:12:24.08:0,24,359	0/0:19,0:18:26.97:0,27,376	0/0:15,0:15:20.96:0,21,314	0/0:14,0:14:24.08:0,24,359	0/0:10,0:10:24.08:0,24,359	0/0:33,0:25:42.14:0,42,622	0/0:11,0:9:21.07:0,21,314	1/1:9,33:29:81.25:1034,81,0	1/1:0,37:32:78.22:992,78,0	1/1:1,29:23:54.18:700,54,0	0/0:20,0:18:39.02:0,39,565	0/0:15,0:14:33.11:0,33,492	0/0:17,0:16:18.53:0,19,265	0/0:18,0:16:39.13:0,39,583	0/0:29,0:29:84.25:0,84,1216	0/0:32,0:32:84.24:0,84,1193	0/0:10,0:9:24.04:0,24,334
chr10	12557275	.	G	GAA	7708.27	PASS	AC=44;AF=0.846;AN=52;BaseQRankSum=5.509;DP=359;FS=8.745;HRun=1;HaplotypeScore=49.6766;InbreedingCoeff=0.7731;MQ=59.49;MQ0=9;MQRankSum=-5.536;QD=30.35;ReadPosRankSum=0.926;VQSLOD=3.8181;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:25:66.22:0,66,1006	1/1:0,6:6:18.03:310,18,0	0/0:21,0:19:48.08:0,48,659	0/0:30,0:28:8.38:0,8,863	1/1:2,15:10:15.01:251,15,0	1/1:0,12:8:24.08:463,24,0	1/1:2,2:4:3.01:58,3,0	1/1:0,4:4:9.02:131,9,0	./.	1/1:1,9:7:21.05:336,21,0	1/1:0,16:13:33.11:609,33,0	1/1:0,10:7:21.07:405,21,0	1/1:1,5:3:6.02:116,6,0	1/1:0,6:6:15.05:289,15,0	1/1:0,9:7:18.06:347,18,0	1/1:0,6:4:9.03:173,9,0	1/1:2,18:19:54.15:987,54,0	1/1:1,6:7:9.03:174,9,0	./.	1/1:4,25:22:39.09:696,39,0	1/1:2,4:4:3.01:58,3,0	1/1:1,18:12:27.02:481,27,0	1/1:2,15:14:27.02:447,27,0	1/1:0,8:5:6.02:116,6,0	0/0:13,0:13:24.08:0,24,367	1/1:1,12:12:33.11:626,33,0	1/1:0,6:4:9.03:174,9,0	1/1:0,11:10:24.08:463,24,0
chr10	12559746	.	GCA	G	330.35	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=3.470;DP=428;FS=0.000;HRun=0;HaplotypeScore=44.2029;InbreedingCoeff=0.8496;MQ=40.95;MQ0=37;MQRankSum=-1.361;QD=19.43;ReadPosRankSum=0.107;VQSLOD=2.8722;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:14:33.07:0,33,573	0/0:6,0:4:12.04:0,12,224	0/0:12,0:6:18.04:0,18,258	0/0:10,0:3:9.03:0,9,168	0/0:24,0:19:30.10:0,30,561	1/1:1,8:8:24.08:353,24,0	1/1:2,6:4:6.02:88,6,0	0/0:33,0:10:30.10:0,30,535	0/0:13,0:13:24.08:0,24,448	0/0:11,0:9:27.09:0,27,506	0/0:17,0:16:36.12:0,36,673	0/0:14,0:9:18.06:0,18,336	0/0:10,0:7:18.06:0,18,336	0/0:11,0:7:21.07:0,21,392	0/0:12,0:10:27.09:0,27,504	0/0:5,0:5:12.04:0,12,224	0/0:14,0:12:27.09:0,27,505	0/0:13,0:13:30.10:0,30,561	0/0:20,0:14:42.14:0,42,786	0/0:46,0:41:78.25:0,78,1429	0/0:10,0:10:15.03:0,15,241	0/0:19,0:17:36.12:0,36,673	0/0:25,0:21:39.13:0,39,729	0/0:11,0:11:24.08:0,24,448	0/0:10,0:10:18.06:0,18,337	0/0:24,0:21:63.16:0,63,1111	0/0:18,0:14:36.12:0,36,653	0/0:7,0:5:15.05:0,15,281
chr10	12560889	.	AC	A	1435.95	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=4.077;DP=567;FS=19.414;HRun=1;HaplotypeScore=64.7262;InbreedingCoeff=0.8343;MQ=32.32;MQ0=65;MQRankSum=-4.695;QD=13.17;ReadPosRankSum=1.315;VQSLOD=1.1713;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:62,0:59:81.25:0,81,1267	0/0:8,0:8:18.06:0,18,287	0/0:25,0:2:5.98:0,6,68	0/0:16,0:3:9.03:0,9,131	0/0:15,0:11:23.78:0,24,381	0/0:19,0:14:21.07:0,21,334	0/0:17,0:10:30.10:0,30,473	1/1:6,12:12:30.10:389,30,0	0/0:18,0:14:11.93:0,12,191	0/0:15,0:7:18.06:0,18,286	0/0:22,0:13:20.96:0,21,330	0/0:10,0:5:9.03:0,9,143	0/0:11,0:7:9.03:0,9,144	0/0:11,0:9:12.04:0,12,191	0/0:19,0:14:24.08:0,24,383	0/0:18,0:13:15.05:0,15,239	0/0:23,0:20:9.03:0,9,144	0/0:11,0:11:6.02:0,6,97	1/1:9,15:16:45.15:583,45,0	1/1:2,33:17:30.10:388,30,0	1/1:6,26:13:18.06:233,18,0	0/0:18,0:16:36.12:0,36,572	0/0:21,0:17:27.09:0,27,428	0/0:28,0:21:24.08:0,24,380	0/0:12,0:12:24.08:0,24,383	0/0:25,0:14:36.12:0,36,549	0/0:29,0:23:33.01:0,33,516	0/0:5,0:3:6.02:0,6,96
chr10	12561144	.	C	CCTGCTAAGA	9760.13	PASS	AB=0.625;AC=36;AF=0.720;AN=50;BaseQRankSum=-4.182;DP=233;FS=29.096;HRun=0;HaplotypeScore=45.5761;InbreedingCoeff=0.4473;MQ=38.74;MQ0=21;MQRankSum=-7.373;QD=73.94;ReadPosRankSum=2.220;VQSLOD=2.6192;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:68.96:0,69,2003	1/1:1,0:1:3.01:134,3,0	0/0:19,0:4:12.04:0,12,325	0/0:20,0:4:12.04:0,12,362	1/1:1,3:3:9.03:436,9,0	0/1:2,5:4:99:279,0,143	0/1:2,2:3:17.78:138,0,18	./.	0/1:5,3:5:27.93:425,0,28	./.	1/1:1,5:4:12.04:581,12,0	1/1:1,7:5:15.05:727,15,0	1/1:0,6:5:15.05:727,15,0	1/1:4,2:5:15.05:631,15,0	1/1:4,4:7:15.05:727,15,0	1/1:2,1:1:3.01:146,3,0	1/1:1,2:3:6.02:291,6,0	1/1:0,2:2:3.01:146,3,0	1/1:3,0:7:15.05:402,15,0	1/1:6,0:20:47.05:1399,47,0	0/0:6,0:6:5.96:0,6,44	1/1:1,5:5:12.04:581,12,0	0/1:3,4:9:0.08:685,0,0	1/1:1,0:1:3.01:145,3,0	0/0:10,0:10:21.07:0,21,641	1/1:1,5:4:12.04:579,12,0	1/1:2,5:4:12.04:582,12,0	./.
chr10	12563772	.	T	TA	19215.26	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=9.704;DP=562;FS=2.075;HRun=0;HaplotypeScore=87.1205;InbreedingCoeff=0.9904;MQ=65.50;MQ0=2;MQRankSum=-4.763;QD=40.54;ReadPosRankSum=3.531;VQSLOD=5.5102;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:43:99:0,120,1620	1/1:0,8:8:24.08:364,24,0	0/0:14,0:14:39.13:0,39,536	0/0:19,0:19:44.84:0,45,569	1/1:0,19:19:54.14:796,54,0	1/1:0,18:18:45.03:624,45,0	1/1:1,21:21:57.19:857,57,0	1/1:0,49:49:99:2142,147,0	1/1:0,12:12:36.05:513,36,0	1/1:0,19:18:51.09:716,51,0	1/1:1,14:15:36.08:514,36,0	1/1:0,13:13:33.11:498,33,0	1/1:0,12:12:33.11:504,33,0	1/1:1,14:14:39.06:556,39,0	1/1:0,14:14:36.05:518,36,0	1/1:0,15:15:36.12:549,36,0	1/1:0,21:21:57.19:850,57,0	1/1:0,17:17:45.15:669,45,0	1/1:0,44:44:99:1867,132,0	1/1:0,27:27:75.11:1059,75,0	1/1:1,54:55:99:2314,157,0	1/1:0,11:11:33.03:452,33,0	1/1:0,14:14:39.13:590,39,0	1/1:0,14:14:36.12:542,36,0	0/0:11,0:11:33.02:0,33,417	1/1:0,23:23:69.21:1009,69,0	1/1:0,13:13:39:528,39,0	1/1:0,4:4:12.04:184,12,0
chr10	12563874	.	C	CAAACAA	1054.82	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=2.869;DP=398;FS=1.775;HRun=0;HaplotypeScore=105.0054;InbreedingCoeff=0.7853;MQ=60.23;MQ0=0;MQRankSum=-5.363;QD=52.74;ReadPosRankSum=-2.133;VQSLOD=3.4246;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:34:80.71:0,81,1708	0/0:8,0:8:12.47:0,12,292	0/0:18,0:16:31.49:0,31,457	0/0:14,0:12:20.53:0,21,318	0/0:10,0:10:24.05:0,24,518	1/1:5,6:13:37.35:940,37,0	1/1:0,5:7:9.03:229,9,0	0/0:41,0:42:99:0,101,1831	0/0:13,0:15:38.72:0,39,644	0/0:8,0:8:21.07:0,21,451	0/0:9,0:9:27.06:0,27,541	0/0:8,0:8:21.02:0,21,443	0/0:8,0:8:24.07:0,24,518	0/0:9,0:9:7.28:0,7,463	0/0:9,0:9:22.75:0,23,401	0/0:2,0:2:2.79:0,3,70	0/0:18,0:18:51.02:0,51,1043	0/0:14,0:14:28.56:0,29,691	0/0:44,0:48:99:0,111,2143	0/0:25,0:26:37.58:0,38,1156	0/0:12,0:12:26.95:0,27,493	0/0:12,0:12:33.08:0,33,643	0/0:11,0:11:29.45:0,29,564	0/0:5,0:5:14.98:0,15,300	0/0:6,0:6:11.48:0,11,303	0/0:14,0:14:30.96:0,31,557	0/0:13,0:13:28.41:0,28,584	0/0:4,0:3:8.96:0,9,112
chr10	12564021	.	CT	C	578.79	PASS	AB=0.859;AC=10;AF=0.185;AN=54;BaseQRankSum=-2.275;DP=289;FS=5.158;HRun=13;HaplotypeScore=41.6587;InbreedingCoeff=-0.2421;MQ=68.84;MQ0=6;MQRankSum=0.715;QD=3.59;ReadPosRankSum=-0.624;VQSLOD=-0.6422;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:16:35.88:0,36,330	0/1:4,1:5:9.89:10,0,75	0/1:17,1:13:5.65:6,0,50	0/1:15,0:8:12.32:12,0,39	0/0:4,0:5:11.84:0,12,97	0/0:2,0:2:3:0,3,29	0/0:10,1:11:2.11:0,2,172	0/1:16,15:35:99:257,0,103	0/1:6,1:7:6.86:7,0,96	0/0:7,0:7:12.02:0,12,117	0/0:14,0:13:30.05:0,30,292	0/0:5,0:4:8.80:0,9,61	0/0:3,0:3:3:0,3,29	0/1:7,0:6:8.51:9,0,69	0/1:7,0:7:1.03:1,0,125	./.	0/0:8,0:11:26.83:0,27,238	0/0:6,0:6:18.01:0,18,169	0/1:10,13:29:93.35:220,0,93	0/1:12,4:18:29.06:67,0,29	0/1:7,7:17:45.89:118,0,46	0/0:5,0:5:9.01:0,9,85	0/0:6,0:6:13.83:0,14,117	0/0:5,0:6:15.02:0,15,146	0/0:7,0:7:12.02:0,12,117	0/0:5,0:7:11.84:0,12,95	0/0:3,0:5:14.70:0,15,116	0/0:10,0:10:23.87:0,24,218
chr10	12566463	.	A	AG	256.26	PASS	AB=0.765;AC=3;AF=0.054;AN=56;BaseQRankSum=-1.931;DP=443;FS=26.999;HRun=0;HaplotypeScore=53.9649;InbreedingCoeff=-0.0589;MQ=64.75;MQ0=0;MQRankSum=-1.909;QD=5.57;ReadPosRankSum=-4.189;VQSLOD=1.1317;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:90.30:0,90,1256	0/0:5,0:5:15.05:0,15,210	0/0:20,0:18:45.14:0,45,593	0/0:13,0:14:29.99:0,30,376	0/0:19,0:19:54.18:0,54,755	0/0:11,0:11:33.11:0,33,462	0/0:11,0:11:31.35:0,31,423	0/1:17,4:21:99:130,0,558	0/0:12,0:12:36.12:0,36,504	0/0:27,0:27:81.24:0,81,1109	0/0:21,0:21:63.21:0,63,880	0/0:16,0:16:45.14:0,45,612	0/0:6,0:6:18.06:0,18,251	0/0:5,0:5:12.04:0,12,168	0/0:13,0:13:39.13:0,39,545	0/0:9,0:9:27.09:0,27,377	0/0:19,0:19:51.17:0,51,713	0/0:20,0:20:54.14:0,54,733	0/1:11,4:15:99:143,0,416	0/0:21,0:21:54.18:0,54,751	0/1:5,5:10:71.63:84,0,72	0/0:14,0:14:39.13:0,39,542	0/0:18,0:18:51.17:0,51,713	0/0:19,0:19:51.17:0,51,713	0/0:19,0:19:57.19:0,57,796	0/0:21,0:21:63.21:0,63,881	0/0:19,0:19:57.19:0,57,794	0/0:7,0:7:21.07:0,21,294
chr10	12566900	.	GA	G	1944.58	PASS	AB=0.909;AC=9;AF=0.161;AN=56;BaseQRankSum=4.599;DP=496;FS=3.593;HRun=7;HaplotypeScore=57.7356;InbreedingCoeff=0.9248;MQ=66.60;MQ0=1;MQRankSum=1.506;QD=21.37;ReadPosRankSum=-1.392;VQSLOD=2.9081;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:39.12:0,39,488	0/0:18,0:18:48.15:0,48,604	0/0:17,0:16:37.64:0,38,441	0/0:9,0:10:27.05:0,27,312	0/0:24,0:24:72.23:0,72,906	0/0:23,0:23:66.21:0,66,830	0/0:14,0:14:42.13:0,42,528	1/1:3,21:24:63.12:636,63,0	0/0:16,0:16:45.13:0,45,555	0/0:19,0:19:51.16:0,51,631	0/0:36,0:36:99:0,105,1288	0/0:16,0:16:45.13:0,45,553	0/0:7,0:7:21.07:0,21,264	0/0:11,0:11:30.10:0,30,377	0/0:13,0:13:33.09:0,33,402	0/1:9,1:10:0.53:1,0,298	0/0:12,0:12:30.05:0,30,359	0/0:18,0:18:51.14:0,51,615	1/1:3,11:14:33.07:336,33,0	1/1:3,27:30:78.17:795,78,0	1/1:1,12:13:33.07:337,33,0	0/0:15,0:15:42.07:0,42,508	0/0:25,0:25:72.22:0,72,896	0/0:14,0:14:39.12:0,39,489	0/0:25,0:25:60.18:0,60,742	0/0:19,0:19:54.17:0,54,669	0/0:21,0:20:60.18:0,60,742	0/0:17,0:17:51.13:0,51,621
chr10	12567631	.	CATTTGGAAA	C	2511.46	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=4.817;DP=483;FS=1.567;HRun=0;HaplotypeScore=173.7264;InbreedingCoeff=0.9818;MQ=69.90;MQ0=0;MQRankSum=-8.324;QD=66.09;ReadPosRankSum=1.804;VQSLOD=3.5259;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:42.12:0,42,1927	0/0:7,0:7:21.07:0,21,895	0/0:30,0:29:84.29:0,84,3510	0/0:12,0:11:33.11:0,33,1272	0/0:36,0:36:99:0,108,5006	1/1:2,26:28:63.22:1982,63,0	1/1:2,8:10:21.07:650,21,0	0/0:7,0:7:21.07:0,21,963	0/0:10,0:10:30.10:0,30,1400	0/0:40,0:40:99:0,117,5494	0/0:29,0:29:87.30:0,87,4044	0/0:12,0:12:36.12:0,36,1619	0/0:8,0:8:24.08:0,24,1191	0/0:6,0:6:18.05:0,18,758	0/0:15,0:15:45.15:0,45,2207	0/0:11,0:11:33.11:0,33,1633	0/0:18,0:18:51.17:0,51,2268	0/0:17,0:17:45.15:0,45,2122	0/0:17,0:17:51.16:0,51,2193	0/0:21,0:21:63.22:0,63,2947	0/0:6,0:6:18.06:0,18,886	0/0:27,0:27:78.27:0,78,3690	0/0:18,0:18:54.19:0,54,2627	0/0:12,0:12:32.98:0,33,1528	0/0:15,0:14:45.14:0,45,2111	0/0:22,0:22:63.22:0,63,2958	0/0:27,0:26:81.28:0,81,3832	0/0:7,0:7:21.07:0,21,966
chr10	12568276	.	C	CA	10050.37	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-10.605;DP=515;FS=2.207;HRun=7;HaplotypeScore=46.2065;InbreedingCoeff=0.9624;MQ=59.22;MQ0=6;MQRankSum=2.654;QD=29.91;ReadPosRankSum=3.049;VQSLOD=5.2177;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:35:95.15:0,95,891	1/1:1,9:10:27.08:325,27,0	0/0:19,0:9:3.44:0,3,130	0/0:15,0:8:15.02:0,15,145	1/1:2,21:23:63.08:726,63,0	1/1:1,21:21:51.16:616,51,0	1/1:1,7:8:18.06:217,18,0	0/0:35,0:35:93.10:0,93,881	1/1:2,15:17:42.13:507,42,0	1/1:5,20:25:60.16:711,60,0	1/1:2,18:20:54.17:652,54,0	1/1:0,9:9:27.08:326,27,0	1/1:2,10:12:33.09:387,33,0	1/1:0,12:12:33.10:399,33,0	1/1:1,14:15:36.11:435,36,0	1/1:1,9:10:24.07:290,24,0	1/1:3,19:22:51.16:616,51,0	1/1:3,16:18:19.41:488,19,0	0/0:23,0:23:57.34:0,57,548	0/0:28,0:28:81.06:0,81,767	0/0:6,0:6:15.02:0,15,145	1/1:2,17:19:48.15:580,48,0	1/1:1,22:23:66.20:797,66,0	1/1:0,9:9:18.06:217,18,0	0/0:17,0:17:48.08:0,48,464	1/1:3,17:20:51.16:616,51,0	1/1:2,18:19:51.10:599,51,0	1/1:2,19:21:45.14:544,45,0
chr10	12568834	.	ATCATGATCAAGTAGGTT	A	3737.38	PASS	AC=8;AF=0.154;AN=52;BaseQRankSum=9.095;DP=506;FS=7.337;HRun=0;HaplotypeScore=235.4144;InbreedingCoeff=0.9803;MQ=54.89;MQ0=6;MQRankSum=-7.494;QD=55.78;ReadPosRankSum=-0.490;VQSLOD=2.0696;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:33.11:0,33,2737	0/0:9,0:9:24.08:0,24,1831	./.	./.	0/0:26,0:26:69.22:0,69,5098	0/0:18,0:18:51.17:0,51,3319	0/0:17,0:17:45.15:0,45,3059	1/1:6,6:10:12.02:254,12,0	0/0:25,0:25:72.25:0,72,5339	0/0:34,0:34:99:0,99,7772	0/0:23,0:22:63.17:0,63,3777	0/0:15,0:15:45.14:0,45,3237	0/0:21,0:21:54.19:0,54,4479	0/0:10,0:10:30.10:0,30,2423	0/0:17,0:17:48.16:0,48,3424	0/0:13,0:13:36.12:0,36,2580	0/0:19,0:17:51.18:0,51,3922	0/0:26,0:26:75.26:0,75,5882	1/1:10,6:11:21.05:808,21,0	1/1:12,16:28:45.15:2089,45,0	1/1:4,7:11:12.04:587,12,0	0/0:31,0:31:81.28:0,81,6155	0/0:27,0:27:78.27:0,78,5549	0/0:16,0:16:44.50:0,45,3317	0/0:12,0:12:36.12:0,36,2762	0/0:20,0:20:54.18:0,54,4094	0/0:22,0:22:66.23:0,66,4927	0/0:13,0:13:36.12:0,36,1985
chr10	12572230	.	A	AGG	17643.77	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=15.395;DP=558;FS=4.106;HRun=1;HaplotypeScore=159.0504;InbreedingCoeff=0.9894;MQ=60.92;MQ0=0;MQRankSum=-7.630;QD=39.92;ReadPosRankSum=3.494;VQSLOD=5.2326;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,123,1868	1/1:3,3:6:15.05:267,15,0	0/0:34,0:32:93.31:0,93,1380	0/0:25,0:23:66.22:0,66,1010	1/1:4,23:28:66.03:877,66,0	1/1:1,12:13:36.08:558,36,0	1/1:0,20:21:60.20:907,60,0	1/1:3,13:15:36.11:491,36,0	1/1:8,19:27:78.11:1168,78,0	1/1:6,16:22:60.10:895,60,0	1/1:2,16:19:47.81:692,48,0	1/1:1,16:17:45.11:707,45,0	1/1:2,6:8:24.04:341,24,0	1/1:3,15:18:51.16:798,51,0	1/1:1,19:20:60.20:955,60,0	1/1:1,14:15:45.11:719,45,0	1/1:2,27:29:75.25:1177,75,0	1/1:6,18:24:63.13:1007,63,0	1/1:4,13:17:45.15:720,45,0	1/1:3,27:31:81.20:1142,81,0	1/1:0,23:25:65.31:896,65,0	1/1:1,7:8:21.06:256,21,0	1/1:2,16:18:50.74:660,51,0	1/1:3,15:18:44.09:676,44,0	0/0:16,0:15:48.15:0,48,714	1/1:1,12:14:42.01:615,42,0	1/1:2,19:21:57.19:873,57,0	1/1:1,5:6:15.05:245,15,0
chr10	12572232	.	TA	T	10218.52	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=15.304;DP=529;FS=4.153;HRun=2;HaplotypeScore=166.4103;InbreedingCoeff=0.9833;MQ=62.19;MQ0=0;MQRankSum=-6.272;QD=24.45;ReadPosRankSum=3.239;VQSLOD=4.7676;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,123,1837	1/1:2,3:5:12.03:133,12,0	0/0:32,0:31:87.29:0,87,1277	0/0:22,0:22:63.21:0,63,935	1/1:2,24:26:64.06:482,64,0	1/1:0,12:12:32.95:328,33,0	1/1:1,20:21:59.76:527,60,0	1/1:3,13:16:41.83:333,42,0	1/1:4,20:24:70.46:669,70,0	1/1:3,16:19:55.92:506,56,0	1/1:1,17:18:45.13:393,45,0	1/1:1,15:16:41.92:415,42,0	1/1:1,6:7:17.93:157,18,0	1/1:2,15:17:50.90:507,51,0	1/1:2,19:21:59.85:564,60,0	1/1:1,14:15:45:471,45,0	1/1:2,27:29:74.83:688,75,0	1/1:4,18:22:56.50:555,57,0	1/1:2,13:15:44.97:444,45,0	1/1:2,27:28:76.82:634,77,0	1/1:3,23:26:51.24:526,51,0	1/1:0,8:8:20.51:124,21,0	1/1:1,16:17:43.01:342,43,0	1/1:2,15:17:47.80:448,48,0	0/0:15,0:14:45.15:0,45,667	1/1:1,12:13:31.58:311,32,0	1/1:1,19:20:56.86:511,57,0	1/1:0,5:5:15:150,15,0
chr10	12574716	.	A	AT	573.28	PASS	AB=0.766;AC=4;AF=0.071;AN=56;BaseQRankSum=11.388;DP=673;FS=89.784;HRun=0;HaplotypeScore=144.9892;InbreedingCoeff=-0.0807;MQ=53.07;MQ0=24;MQRankSum=-11.062;QD=5.21;ReadPosRankSum=3.516;VQSLOD=-0.0536;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:31:82.77:0,83,1093	0/0:9,0:9:27.07:0,27,359	0/0:15,0:3:8.06:0,8,90	0/0:11,0:2:3.01:0,3,42	0/0:40,0:39:95.64:0,96,1326	0/0:18,0:18:50.38:0,50,678	0/0:14,0:11:27.09:0,27,378	0/0:24,0:17:14.25:0,14,502	0/0:25,0:25:56.27:0,56,893	0/0:34,0:29:81.60:0,82,1062	0/0:31,0:30:83.07:0,83,1155	0/0:15,3:16:17.03:0,17,598	0/1:8,2:9:3.06:3,0,294	0/1:14,6:16:17.24:17,0,539	0/0:15,0:14:42.14:0,42,587	0/0:11,0:11:33.11:0,33,462	0/0:34,0:31:84.25:0,84,1149	0/0:31,0:30:79.59:0,80,1093	0/0:22,0:11:33.11:0,33,462	0/0:29,0:27:53.16:0,53,810	0/0:25,0:23:60.18:0,60,802	0/1:20,9:28:99:208,0,695	0/1:29,22:51:99:446,0,1021	0/0:13,1:14:33.10:0,33,447	0/0:37,0:35:78.22:0,78,1074	0/0:24,0:21:53.32:0,53,741	0/0:40,0:36:94.31:0,94,1454	0/0:9,0:9:27.09:0,27,377
chr10	12574742	.	G	GA	4135.35	PASS	AB=0.771;AC=18;AF=0.321;AN=56;BaseQRankSum=17.754;DP=757;FS=126.222;HRun=4;HaplotypeScore=144.6761;InbreedingCoeff=-0.4834;MQ=54.44;MQ0=7;MQRankSum=-12.867;QD=7.69;ReadPosRankSum=-3.600;VQSLOD=-0.5444;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:41:97.71:0,98,1045	0/1:7,1:8:22.78:23,0,152	0/0:16,0:11:27.07:0,27,303	0/0:14,0:8:20.95:0,21,220	0/1:31,11:41:99:222,0,861	0/1:16,4:20:61.09:61,0,456	0/0:13,2:11:30.08:0,30,330	0/0:27,0:24:69.18:0,69,767	0/0:24,1:25:25.36:0,25,673	0/1:24,11:30:99:196,0,692	0/1:22,3:25:53.57:54,0,596	0/1:14,9:21:99:144,0,371	0/1:4,6:9:77.96:169,0,78	0/1:12,8:14:99:119,0,257	0/0:13,2:14:4.42:0,4,364	0/0:11,2:11:33.08:0,33,365	0/0:31,5:32:43.47:0,43,877	0/1:29,3:32:30.13:30,0,813	0/1:25,4:24:15.84:16,0,576	0/1:22,16:36:99:466,0,608	0/1:27,6:31:36.46:36,0,755	0/1:20,18:39:99:731,0,360	0/1:28,32:59:99:1067,0,651	0/1:13,12:24:99:203,0,289	0/1:26,11:36:99:312,0,641	0/1:15,9:21:99:185,0,416	0/1:29,9:34:99:102,0,771	0/0:16,0:16:48.14:0,48,544
chr10	12574895	.	CAATT	C	8840.84	PASS	AB=0.745;AC=23;AF=0.411;AN=56;BaseQRankSum=19.315;DP=915;FS=110.536;HRun=0;HaplotypeScore=151.1685;InbreedingCoeff=-0.6970;MQ=48.65;MQ0=24;MQRankSum=-15.310;QD=12.04;ReadPosRankSum=4.064;VQSLOD=0.9383;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:40,11:43:99:347,0,2285	0/1:5,5:10:99:260,0,379	0/0:43,0:20:57.20:0,57,1535	0/0:39,0:17:44.43:0,44,1245	0/1:19,9:28:99:320,0,1310	0/1:23,19:38:99:655,0,1482	0/1:20,2:20:67.88:68,0,1058	0/0:43,4:36:32.20:0,32,2261	0/1:23,10:32:99:215,0,1560	0/1:26,8:32:99:260,0,1831	0/1:15,7:20:99:233,0,1077	0/1:9,18:26:99:688,0,674	0/1:12,30:35:99:957,0,817	0/1:16,14:30:99:615,0,1131	0/1:19,8:27:99:389,0,1322	0/1:23,7:29:98.81:99,0,1705	0/0:26,1:25:63.22:0,63,1665	0/1:25,5:29:90.03:90,0,1884	0/1:14,8:17:99:289,0,716	0/1:37,7:44:99:221,0,2827	0/0:21,4:23:57.18:0,57,1484	0/1:23,19:36:99:496,0,1386	0/1:28,22:44:99:859,0,1908	0/1:22,9:27:99:213,0,1158	0/1:12,8:20:99:239,0,935	0/1:23,13:34:99:563,0,1598	0/1:32,14:44:99:515,0,2258	0/1:8,7:13:99:251,0,585
chr10	12575026	.	G	GT	16130.24	PASS	AB=0.708;AC=26;AF=0.464;AN=56;BaseQRankSum=25.513;DP=1132;FS=36.045;HRun=0;HaplotypeScore=208.3574;InbreedingCoeff=-0.8855;MQ=49.88;MQ0=19;MQRankSum=-10.762;QD=14.66;ReadPosRankSum=6.476;VQSLOD=4.0418;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:28,17:39:99:481,0,638	0/1:14,3:17:98.02:98,0,457	0/0:17,0:13:39.11:0,39,526	0/0:15,0:9:3.69:0,4,261	0/1:30,19:49:99:722,0,940	0/1:32,15:41:99:314,0,1100	0/1:10,8:17:99:199,0,274	0/1:31,9:31:54.40:54,0,936	0/1:24,13:35:99:469,0,788	0/1:29,27:49:99:869,0,770	0/1:32,15:47:99:495,0,1049	0/1:15,28:40:99:905,0,332	0/1:20,32:46:99:1021,0,572	0/1:18,26:43:99:845,0,467	0/1:23,12:33:99:427,0,782	0/1:19,12:32:99:378,0,578	0/1:24,16:40:99:515,0,774	0/1:30,19:46:99:748,0,855	0/1:17,9:24:99:268,0,544	0/1:37,18:48:99:385,0,1272	0/1:12,6:18:99:190,0,413	0/1:16,48:58:99:1562,0,422	0/1:25,67:87:99:2388,0,573	0/1:21,27:47:99:1018,0,588	0/1:20,16:32:99:477,0,657	0/1:22,18:36:99:566,0,721	0/1:28,11:37:99:330,0,890	0/1:20,11:30:99:406,0,514
chr10	12575107	.	AT	A	8209.81	PASS	AB=0.691;AC=17;AF=0.327;AN=52;BaseQRankSum=17.014;DP=1303;FS=6.082;HRun=1;HaplotypeScore=249.5439;InbreedingCoeff=-0.4857;MQ=48.24;MQ0=52;MQRankSum=-5.816;QD=11.12;ReadPosRankSum=1.460;VQSLOD=3.3198;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:22,35:56:99:903,0,679	0/1:8,7:14:99:169,0,320	./.	./.	0/1:38,20:51:99:211,0,1247	0/1:19,23:39:99:489,0,687	0/1:13,5:18:77.55:78,0,487	0/0:59,0:17:48.09:0,48,652	0/1:15,26:39:99:732,0,461	0/1:32,33:57:99:762,0,1160	0/1:32,27:49:99:410,0,1113	0/0:50,0:46:99:0,129,1833	0/0:59,0:54:99:0,154,2277	0/0:59,0:57:99:0,144,2074	0/1:22,12:32:99:300,0,890	0/0:33,0:32:81.27:0,81,1203	0/0:41,1:41:86.78:0,87,1688	0/1:33,25:56:99:782,0,1178	0/1:17,11:21:99:334,0,430	0/1:33,27:50:99:423,0,1276	0/1:17,16:33:99:488,0,667	0/0:79,0:68:99:0,183,2653	0/0:115,0:91:99:0,252,3610	0/0:38,0:35:92.65:0,93,1251	0/1:22,12:32:99:305,0,784	0/1:32,25:55:99:741,0,1165	0/1:25,27:51:99:740,0,959	0/1:15,12:25:99:343,0,596
chr10	12575372	.	CA	C	8292.13	PASS	AB=0.714;AC=26;AF=0.464;AN=56;BaseQRankSum=20.170;DP=1109;FS=163.283;HRun=6;HaplotypeScore=206.3769;InbreedingCoeff=-0.8776;MQ=50.80;MQ0=32;MQRankSum=-8.893;QD=7.68;ReadPosRankSum=2.780;VQSLOD=-0.0996;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:27,23:48:99:518,0,686	0/1:12,7:19:99:174,0,343	0/0:16,0:11:20.98:0,21,229	0/0:13,0:10:6.98:0,7,193	0/1:36,13:44:99:137,0,1110	0/1:19,15:28:99:209,0,629	0/1:20,7:25:95.04:95,0,581	0/1:30,13:37:99:246,0,708	0/1:23,12:32:99:174,0,705	0/1:32,15:42:99:196,0,952	0/1:30,31:52:99:535,0,884	0/1:16,19:29:99:339,0,332	0/1:9,20:25:99:353,0,288	0/1:16,28:39:99:542,0,450	0/1:19,8:25:91.99:92,0,641	0/1:16,6:22:74.83:75,0,499	0/1:28,22:49:99:509,0,849	0/1:17,17:33:99:417,0,572	0/1:30,12:34:99:205,0,653	0/1:34,29:50:99:322,0,1014	0/1:17,5:22:98.01:98,0,568	0/1:25,41:50:99:699,0,651	0/1:35,52:75:99:1099,0,718	0/1:16,28:41:99:464,0,330	0/1:26,9:33:99:141,0,727	0/1:30,13:39:99:145,0,954	0/1:31,18:45:99:320,0,1048	0/1:15,8:23:99:189,0,523
chr10	12576598	.	GACGGAGC	G	17781.66	PASS	AB=0.550;AC=41;AF=0.732;AN=56;BaseQRankSum=9.327;DP=442;FS=5.368;HRun=0;HaplotypeScore=102.0317;InbreedingCoeff=0.6773;MQ=39.37;MQ0=9;MQRankSum=-10.062;QD=52.61;ReadPosRankSum=0.656;VQSLOD=4.3584;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:66.23:0,66,2577	0/1:1,8:9:97.07:525,0,97	0/0:19,0:1:3.01:0,3,106	0/0:13,0:5:15.05:0,15,590	1/1:2,17:17:36.12:944,36,0	0/0:19,0:19:54.19:0,54,2151	0/0:10,0:10:27.09:0,27,1017	1/1:4,26:17:45.15:1165,45,0	1/1:3,12:15:36.12:948,36,0	1/1:0,18:13:39.12:933,39,0	1/1:2,15:16:30.10:790,30,0	1/1:0,14:12:33.11:870,33,0	1/1:0,15:13:30.10:791,30,0	1/1:1,13:14:33.11:870,33,0	1/1:1,17:17:48.16:1265,48,0	1/1:0,11:9:27.09:712,27,0	1/1:7,11:16:18.06:474,18,0	0/1:3,10:13:99:603,0,114	1/1:1,12:13:33.11:832,33,0	1/1:2,17:19:51.18:1344,51,0	1/1:2,7:9:12.04:312,12,0	1/1:0,22:20:54.19:1419,54,0	1/1:0,11:10:24.08:632,24,0	1/1:3,6:9:12.04:316,12,0	0/0:17,0:17:51.18:0,51,2000	1/1:1,14:11:30.10:791,30,0	1/1:3,16:15:33.11:870,33,0	0/1:2,8:7:65.77:377,0,66
chr10	12576947	.	AC	A	1020.79	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.962;DP=614;FS=8.781;HRun=1;HaplotypeScore=67.2958;InbreedingCoeff=0.9994;MQ=58.51;MQ0=4;MQRankSum=2.229;QD=23.20;ReadPosRankSum=2.093;VQSLOD=3.0219;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:88.97:0,89,1218	0/0:17,0:17:49.04:0,49,651	0/0:28,0:19:47.34:0,47,608	0/0:24,0:20:47.80:0,48,562	0/0:26,0:26:69.14:0,69,913	1/1:1,23:24:63.16:666,63,0	1/1:2,18:20:45.11:476,45,0	0/0:23,0:23:69.12:0,69,840	0/0:24,0:24:72.20:0,72,931	0/0:23,0:23:63.19:0,63,830	0/0:28,0:28:78.11:0,78,993	0/0:24,0:24:72.19:0,72,929	0/0:20,0:20:60.20:0,60,813	0/0:15,0:15:45.15:0,45,611	0/0:19,0:19:57.12:0,57,708	0/0:9,0:9:27.09:0,27,366	0/0:26,0:26:76.97:0,77,967	0/0:16,0:16:45.05:0,45,559	0/0:22,0:21:60.17:0,60,775	0/0:26,0:26:78.07:0,78,948	0/0:26,0:26:72.18:0,72,928	0/0:22,0:22:63.10:0,63,812	0/0:23,0:23:69.19:0,69,903	0/0:22,0:22:60.17:0,60,798	0/0:18,0:18:54.17:0,54,717	0/0:20,0:20:60.18:0,60,785	0/0:24,0:23:69.15:0,69,869	0/0:13,0:13:36.12:0,36,479
chr10	12577605	.	TA	T	1512.77	PASS	AB=0.778;AC=17;AF=0.304;AN=56;BaseQRankSum=13.186;DP=571;FS=4.153;HRun=4;HaplotypeScore=74.4645;InbreedingCoeff=-0.4352;MQ=49.04;MQ0=28;MQRankSum=-11.084;QD=3.97;ReadPosRankSum=3.804;VQSLOD=0.0549;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:24,13:33:99:265,0,748	0/0:5,0:5:11.72:0,12,164	0/0:17,5:6:9.03:0,9,117	0/0:21,4:7:6.72:0,7,134	0/1:19,7:25:84.22:84,0,570	0/1:12,4:14:60.51:61,0,293	0/1:9,1:10:11.79:12,0,269	0/0:28,0:25:72.24:0,72,1004	0/0:23,0:23:60.20:0,60,833	0/1:16,6:19:50.53:51,0,600	0/1:16,4:18:62.46:62,0,459	0/1:7,9:12:99:146,0,216	0/1:10,6:11:8.83:9,0,309	0/1:12,4:15:71.46:71,0,342	0/0:18,0:17:42.09:0,42,541	0/0:10,0:10:27.07:0,27,357	0/1:26,9:29:99:104,0,722	0/1:21,8:23:99:155,0,478	0/0:14,0:14:39.09:0,39,524	0/1:24,9:28:99:137,0,716	0/1:16,7:19:95.42:95,0,456	0/1:7,7:12:99:146,0,219	0/1:12,3:12:5.73:6,0,338	0/1:13,8:18:99:167,0,366	0/0:10,0:10:24.04:0,24,314	0/1:26,6:28:98.43:98,0,779	0/0:19,7:19:21.22:0,21,698	0/0:9,0:7:21.07:0,21,294
chr10	12581566	.	T	TA	7703.39	PASS	AB=0.550;AC=41;AF=0.732;AN=56;BaseQRankSum=-9.477;DP=353;FS=14.055;HRun=8;HaplotypeScore=34.7115;InbreedingCoeff=0.7752;MQ=73.00;MQ0=1;MQRankSum=-1.658;QD=27.91;ReadPosRankSum=0.219;VQSLOD=3.6778;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:44.99:0,45,406	1/1:0,8:8:21.05:231,21,0	0/0:6,0:5:3.23:0,3,9	0/0:11,0:8:3.14:0,3,74	1/1:1,16:17:42.08:470,42,0	0/0:12,0:12:30.01:0,30,275	0/0:12,0:12:3.34:0,3,196	1/1:4,25:29:77.44:856,77,0	1/1:2,4:6:12.04:138,12,0	1/1:0,19:20:60.01:672,60,0	1/1:0,16:16:45.13:519,45,0	1/1:3,12:15:39.12:448,39,0	1/1:1,9:10:27.08:312,27,0	1/1:0,6:6:18.05:208,18,0	1/1:0,7:7:21.06:242,21,0	1/1:1,6:7:18.05:208,18,0	0/1:2,9:10:3.23:218,0,3	1/1:2,11:13:27.08:312,27,0	1/1:4,15:19:17.62:442,18,0	1/1:3,15:18:42.12:485,42,0	1/1:0,5:5:15.04:173,15,0	0/0:1,0:1:3:0,3,27	1/1:2,7:10:23.90:257,24,0	1/1:1,2:3:6:58,6,0	0/0:17,0:17:48.02:0,48,439	1/1:2,19:21:48.14:554,48,0	1/1:0,18:18:48.14:554,48,0	1/1:6,11:17:30.09:346,30,0
chr10	12581937	.	AT	A	7752.80	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=10.871;DP=424;FS=2.948;HRun=7;HaplotypeScore=44.4583;InbreedingCoeff=0.9718;MQ=71.49;MQ0=0;MQRankSum=-2.323;QD=26.83;ReadPosRankSum=3.660;VQSLOD=5.3197;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:90.29:0,90,1132	1/1:1,14:15:39.09:398,39,0	0/0:15,0:15:38.69:0,39,478	0/0:5,0:5:9.03:0,9,110	1/1:2,22:24:66.15:672,66,0	1/1:0,18:18:48.11:490,48,0	1/1:0,3:3:9.02:92,9,0	0/0:18,0:18:48.15:0,48,604	1/1:1,10:11:24.05:245,24,0	1/1:1,24:25:72.14:727,72,0	1/1:3,19:22:54.11:549,54,0	1/1:0,14:14:39.09:398,39,0	1/1:3,8:11:24.05:245,24,0	1/1:0,4:4:12.03:122,12,0	1/1:0,7:7:18.04:184,18,0	1/1:1,11:12:33.08:337,33,0	1/1:2,22:24:60.13:611,60,0	1/1:0,23:23:57.13:581,57,0	0/0:17,0:17:45.14:0,45,556	0/0:22,0:22:66.21:0,66,830	0/0:11,0:11:33.11:0,33,415	1/1:0,8:8:21.05:214,21,0	1/1:0,11:11:30.07:306,30,0	1/1:0,7:7:21.05:214,21,0	0/0:16,0:16:45.13:0,45,553	1/1:1,14:15:42.06:418,42,0	1/1:1,19:20:54.12:551,54,0	1/1:0,15:15:39.09:398,39,0
chr10	12583930	.	TCC	T	19203.76	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=12.839;DP=613;FS=4.716;HRun=3;HaplotypeScore=129.4499;InbreedingCoeff=0.9997;MQ=92.13;MQ0=0;MQRankSum=-8.112;QD=42.21;ReadPosRankSum=5.279;VQSLOD=4.3751;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,117,2183	1/1:0,11:11:33.11:505,33,0	0/0:41,0:41:99:0,116,2176	0/0:29,0:29:75.13:0,75,1293	1/1:0,22:22:63.21:964,63,0	0/0:14,0:14:42.14:0,42,811	0/0:15,0:15:39.13:0,39,754	1/1:2,22:24:63.17:920,63,0	1/1:0,31:31:87.30:1330,87,0	1/1:0,23:23:69.22:1034,69,0	1/1:0,18:18:51.17:781,51,0	1/1:0,18:18:54.18:827,54,0	1/1:0,13:13:36.12:551,36,0	1/1:1,18:19:51.10:748,51,0	1/1:0,19:19:48.09:707,48,0	1/1:1,12:13:33.11:505,33,0	1/1:1,31:32:90.31:1370,90,0	1/1:0,10:10:30.10:459,30,0	1/1:1,26:27:81.26:1207,81,0	1/1:2,24:26:75.25:1144,75,0	1/1:0,21:21:54.18:827,54,0	1/1:1,26:27:69.71:1057,70,0	1/1:0,19:19:54.18:827,54,0	1/1:0,17:17:48.16:735,48,0	0/0:18,0:18:48.16:0,48,896	1/1:0,22:22:66.22:1006,66,0	1/1:0,29:29:69.23:1056,69,0	1/1:0,14:14:42.14:643,42,0
chr10	12585179	.	GACAC	G	2148.43	PASS	AB=0.815;AC=33;AF=0.611;AN=54;BaseQRankSum=1.632;DP=496;FS=1.503;HRun=0;HaplotypeScore=90.8102;InbreedingCoeff=0.3653;MQ=72.35;MQ0=13;MQRankSum=-2.521;QD=6.69;ReadPosRankSum=3.104;VQSLOD=1.9934;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:39.02:0,39,593	0/1:9,0:9:15.89:56,0,16	0/1:41,0:23:0:0,0,0	./.	1/1:8,8:17:9.17:141,9,0	1/1:15,0:15:8.95:74,9,0	1/1:14,0:14:5.68:39,6,0	0/0:21,0:19:11.90:0,12,85	1/1:14,7:20:5.98:93,6,0	1/1:9,1:14:0.22:134,0,0	0/1:8,1:9:34.18:75,0,34	0/0:4,0:8:10.17:0,10,58	1/1:9,2:11:10.14:162,10,0	1/1:4,1:8:3.48:48,3,0	0/1:7,12:19:14.32:213,0,14	1/1:9,3:12:3.01:47,3,0	1/1:11,9:20:9.03:140,9,0	1/1:5,2:9:10.67:145,11,0	0/0:10,0:10:12.03:0,12,152	0/0:3,0:8:6.02:0,6,105	0/0:28,0:43:16.56:0,17,225	0/1:6,7:15:5.97:23,0,6	1/1:3,10:12:8.77:140,9,0	1/1:13,13:26:15.05:234,15,0	0/0:15,0:15:22.95:0,23,246	0/1:20,1:21:9.29:161,0,9	0/1:6,4:11:3.42:66,0,3	1/1:5,5:12:24.07:333,24,0
chr10	12585214	.	ACACACACACT	A	289.72	PASS	AB=0.795;AC=4;AF=0.071;AN=56;BaseQRankSum=3.810;DP=511;FS=1.374;HRun=0;HaplotypeScore=142.8653;InbreedingCoeff=0.4630;MQ=57.62;MQ0=15;MQRankSum=-2.706;QD=6.16;ReadPosRankSum=-2.527;VQSLOD=1.8954;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:30:66.04:0,66,1857	0/0:8,0:8:20.97:0,21,287	0/0:24,0:12:29.15:0,29,317	0/0:19,0:9:20.22:0,20,251	0/0:21,0:21:34.64:0,35,374	0/1:8,18:25:13.22:187,0,13	1/1:2,10:12:9.03:199,9,0	0/0:16,0:15:45.10:0,45,620	0/0:19,0:19:32.06:0,32,436	0/0:23,0:22:54.45:0,54,741	0/0:13,0:13:24.05:0,24,348	0/0:16,0:15:39.06:0,39,670	0/0:13,0:12:36.09:0,36,635	0/0:8,0:8:14.92:0,15,175	0/0:23,0:22:39.03:0,39,597	0/0:8,0:8:15.01:0,15,184	0/0:21,0:21:32.85:0,33,376	0/0:16,0:16:35.94:0,36,461	0/0:14,0:14:41.96:0,42,779	0/0:10,0:10:21.03:0,21,453	0/0:46,0:45:71.92:0,72,1184	0/0:15,0:15:11.53:0,12,164	0/0:21,0:20:29.35:0,29,378	0/0:27,0:27:39.96:0,40,593	0/0:18,0:18:39.56:0,40,1106	0/0:22,0:20:53.37:0,53,549	0/1:9,0:9:2.06:2,0,134	0/0:11,0:11:14.67:0,15,430
chr10	12588998	.	CACACACACACACACACACACACACAT	C	314.69	PASS	AB=1.000;AC=10;AF=0.192;AN=52;BaseQRankSum=-3.732;DP=575;FS=13.479;HRun=0;HaplotypeScore=297.8385;InbreedingCoeff=-0.0468;MQ=50.88;MQ0=18;MQRankSum=-0.648;QD=1.68;ReadPosRankSum=-1.113;VQSLOD=0.7956;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:45:68.67:0,69,3717	0/0:11,0:10:15.05:0,15,1161	./.	./.	0/1:15,0:14:7.88:8,0,822	1/1:4,14:18:6.02:325,6,0	0/0:24,0:22:1.24:0,1,3	0/1:31,0:31:12.84:13,0,439	0/0:19,0:19:15.86:0,16,1241	0/0:24,0:24:16.94:0,17,1337	0/0:16,0:16:0.08:0,0,1097	0/0:20,0:17:16.52:0,17,663	0/1:15,0:15:1.08:1,0,848	0/0:10,0:10:6.02:0,6,448	0/0:11,0:11:15:0,15,679	0/0:10,0:9:15.03:0,15,842	0/0:25,0:23:33.93:0,34,1778	0/0:11,0:11:8.48:0,8,752	0/0:19,0:18:22.09:0,22,1192	0/1:17,0:16:7.94:8,0,798	0/0:35,0:32:4.11:0,4,1788	0/1:30,0:30:26.42:26,0,780	0/0:28,0:27:21.07:0,21,1115	0/1:21,0:21:13.86:14,0,1394	0/0:19,0:19:33.11:0,33,2421	0/1:23,0:20:27.13:27,0,524	0/1:17,0:17:20.44:20,0,752	0/0:7,0:7:3.01:0,3,39
chr10	12589022	.	CAT	C	3562.10	PASS	AB=0.928;AC=40;AF=0.769;AN=52;BaseQRankSum=1.563;DP=539;FS=0.000;HRun=0;HaplotypeScore=88.9507;InbreedingCoeff=-0.0768;MQ=46.87;MQ0=15;MQRankSum=3.175;QD=6.90;ReadPosRankSum=-4.138;VQSLOD=2.1874;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:52,0:48:68.27:68,0,338	0/1:7,0:6:3.51:34,0,4	./.	./.	0/1:17,0:16:0.35:131,0,0	0/1:17,0:17:6.13:47,0,6	0/1:5,16:19:3.75:13,0,4	0/1:16,11:26:60.90:190,0,61	0/1:19,0:19:13.38:115,0,13	1/1:25,0:25:6.91:307,7,0	1/1:18,0:18:32.94:268,33,0	1/1:19,0:17:13.58:187,14,0	1/1:15,0:15:30.60:222,31,0	1/1:7,0:7:10.33:65,10,0	1/1:11,0:11:14.10:101,14,0	1/1:9,0:8:5.62:79,6,0	0/1:28,0:26:67.23:80,0,67	1/1:12,0:12:11.85:177,12,0	0/1:14,0:13:34.69:35,0,59	1/1:19,0:19:13.03:113,13,0	1/1:52,0:50:5.39:152,5,0	1/1:24,0:24:20.94:168,21,0	1/1:29,0:27:12.08:153,12,0	1/1:20,0:20:19.07:221,19,0	0/0:15,0:15:35.29:0,35,336	0/1:27,0:24:26.08:283,0,26	1/1:16,0:16:19.49:229,19,0	1/1:11,0:11:3:126,3,0
chr10	12589024	.	TAC	T	293.91	PASS	AB=0.953;AC=10;AF=0.192;AN=52;BaseQRankSum=-2.168;DP=529;FS=1.899;HRun=0;HaplotypeScore=100.3133;InbreedingCoeff=-0.0398;MQ=46.91;MQ0=14;MQRankSum=2.285;QD=1.29;ReadPosRankSum=-4.190;VQSLOD=0.7584;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:50,2:48:87.21:87,0,176	0/0:7,0:6:8.94:0,9,67	./.	./.	0/0:16,0:15:5.20:0,5,55	0/0:17,0:17:2.98:0,3,34	0/0:19,0:17:1.55:0,2,4	0/1:28,0:27:15.94:115,0,16	0/0:19,0:19:3.15:0,3,64	0/0:24,0:24:16.82:0,17,130	0/0:18,0:18:2.46:0,2,23	1/1:17,0:16:1.89:7,2,0	0/0:15,0:15:7.23:0,7,50	0/0:7,0:7:4.53:0,5,25	0/0:11,0:11:5.96:0,6,44	0/0:10,0:9:7.25:0,7,61	0/0:17,0:26:17.85:0,18,167	0/1:11,0:12:15.96:16,0,46	0/1:14,0:13:45.74:51,0,46	0/1:19,0:19:39.45:95,0,39	0/1:24,26:49:39.55:40,0,95	0/1:16,0:24:0.04:0,0,0	0/0:27,0:25:7.74:0,8,66	0/0:20,0:20:5.97:0,6,56	0/0:14,0:14:18.06:0,18,252	0/0:28,0:25:19.33:0,19,143	0/0:16,0:16:4.22:0,4,43	0/1:11,0:11:0:0,0,0
chr10	12589793	.	G	GTA	19718.42	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-11.239;DP=573;FS=2.340;HRun=0;HaplotypeScore=66.1451;InbreedingCoeff=0.9714;MQ=65.85;MQ0=11;MQRankSum=-0.305;QD=39.20;ReadPosRankSum=1.450;VQSLOD=6.3435;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:66.17:0,66,810	1/1:2,11:12:27.09:452,27,0	0/0:10,0:12:29.26:0,29,263	0/0:3,0:3:9.01:0,9,95	1/1:1,26:26:66.23:1104,66,0	1/1:1,18:18:48.16:803,48,0	1/1:0,7:7:18.06:301,18,0	1/1:7,25:32:75.24:1224,75,0	1/1:7,19:26:37.44:837,37,0	1/1:11,35:45:73.18:1758,73,0	1/1:6,31:37:57.98:1437,58,0	1/1:4,9:13:27.09:450,27,0	1/1:0,17:17:45.15:753,45,0	1/1:0,14:14:36.12:602,36,0	1/1:0,15:15:42.14:703,42,0	1/1:0,11:11:33.11:552,33,0	1/1:0,12:12:33.11:551,33,0	1/1:4,10:14:33.11:549,33,0	1/1:5,11:16:33.11:552,33,0	1/1:3,41:42:99:1774,108,0	1/1:4,15:19:33.11:552,33,0	1/1:3,11:15:30.02:469,30,0	1/1:1,15:16:36.12:602,36,0	1/1:0,6:6:12.04:201,12,0	0/0:27,0:27:72.22:0,72,905	1/1:4,30:32:87.29:1436,87,0	1/1:0,30:29:84.29:1405,84,0	1/1:5,14:18:39.13:651,39,0
chr10	12590620	.	CG	C	6200.64	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=3.582;DP=366;FS=22.201;HRun=7;HaplotypeScore=52.6631;InbreedingCoeff=0.8971;MQ=63.75;MQ0=2;MQRankSum=-6.608;QD=21.76;ReadPosRankSum=2.294;VQSLOD=3.2525;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:38:81.22:0,81,981	1/1:2,4:6:12.03:122,12,0	0/0:18,0:15:27.07:0,27,310	0/0:18,0:14:30.04:0,30,341	1/1:1,19:20:51.12:520,51,0	1/1:3,11:13:33.07:336,33,0	1/1:0,18:18:45.10:457,45,0	1/1:2,9:9:24.05:244,24,0	1/1:3,14:18:39.06:388,39,0	1/1:7,13:20:39.08:393,39,0	1/1:4,6:10:12.03:122,12,0	1/1:3,8:11:21.05:214,21,0	1/1:1,8:9:24.05:244,24,0	1/1:2,11:13:30.05:299,30,0	1/1:0,6:6:18.04:184,18,0	1/1:0,6:6:18.04:183,18,0	1/1:1,10:10:27.06:275,27,0	1/1:5,15:18:39.08:398,39,0	1/1:2,13:13:36.05:358,36,0	1/1:1,7:8:12.02:122,12,0	1/1:1,9:11:27.53:276,28,0	1/1:2,7:9:9.02:92,9,0	1/1:3,6:8:12.02:118,12,0	1/1:1,9:10:21.04:214,21,0	0/0:6,0:6:6.01:0,6,63	1/1:2,13:14:39.09:397,39,0	1/1:0,8:7:12.03:122,12,0	1/1:1,5:6:12.03:122,12,0
chr10	12592025	.	G	GA	185.30	PASS	AB=0.667;AC=13;AF=0.591;AN=22;BaseQRankSum=1.358;DP=139;FS=0.000;HRun=1;HaplotypeScore=24.1896;InbreedingCoeff=0.4057;MQ=17.24;MQ0=67;MQRankSum=-1.584;QD=8.82;ReadPosRankSum=2.218;VQSLOD=0.9038;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:7:3.01:0,3,39	./.	./.	./.	./.	0/0:14,0:6:15.05:0,15,194	0/0:7,0:1:2.90:0,3,16	./.	./.	1/1:0,2:1:3.01:40,3,0	0/1:2,2:3:1.16:31,0,1	1/1:0,1:1:3.01:40,3,0	./.	./.	./.	./.	./.	./.	./.	1/1:2,2:3:1.93:36,2,0	./.	1/1:1,2:1:3.01:38,3,0	1/1:1,3:2:1.93:37,2,0	./.	0/0:22,0:17:30.07:0,30,388	./.	./.	1/1:2,1:3:6.46:63,6,0
chr10	12596793	.	T	TG	869.43	PASS	AC=16;AF=1.000;AN=16;BaseQRankSum=-0.992;DP=140;FS=4.586;HRun=0;HaplotypeScore=17.6349;MQ=16.44;MQ0=92;MQRankSum=2.037;QD=11.29;ReadPosRankSum=1.828;VQSLOD=3.2317;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,1:2:3.01:48,3,0	./.	./.	./.	./.	./.	1/1:0,3:2:3.01:39,3,0	1/1:13,1:2:2.28:47,2,0	./.	./.	./.	./.	./.	./.	./.	./.	1/1:2,3:3:6.02:85,6,0	1/1:2,2:2:3.01:48,3,0	1/1:10,22:19:3.12:576,3,0	./.	1/1:1,1:1:3.01:48,3,0	./.	./.	./.	./.	./.	1/1:11,1:1:3.01:48,3,0	./.
chr10	12604412	.	A	AG	5801.44	PASS	AB=0.500;AC=43;AF=0.827;AN=52;BaseQRankSum=0.862;DP=368;FS=53.642;HRun=0;HaplotypeScore=28.9251;InbreedingCoeff=0.8077;MQ=40.21;MQ0=8;MQRankSum=-6.271;QD=21.81;ReadPosRankSum=2.159;VQSLOD=1.6977;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:34:57.08:0,57,716	1/1:0,6:6:12.04:178,12,0	0/0:27,0:7:15.03:0,15,182	0/0:17,0:5:8.76:0,9,118	1/1:1,18:17:32.97:411,33,0	1/1:0,26:21:51.17:751,51,0	1/1:0,6:3:6.02:89,6,0	1/1:1,6:4:11.97:106,12,0	1/1:0,17:11:24.08:356,24,0	1/1:0,15:8:23.99:309,24,0	1/1:2,17:12:24.08:355,24,0	1/1:0,12:9:21.03:287,21,0	1/1:0,10:6:15.05:222,15,0	1/1:0,8:6:9.03:133,9,0	1/1:1,10:7:9.03:133,9,0	1/1:0,7:7:11.97:151,12,0	1/1:0,10:7:15.05:222,15,0	./.	1/1:1,6:2:6.02:89,6,0	1/1:0,16:11:23.93:300,24,0	0/1:0,4:2:0:0,0,0	1/1:0,12:8:12.04:170,12,0	1/1:0,14:12:30.10:444,30,0	./.	0/0:16,0:16:39.12:0,39,514	1/1:2,17:16:42.05:543,42,0	1/1:0,18:11:30.02:417,30,0	1/1:0,3:3:9.03:134,9,0
chr10	12605756	.	AGACTATACATG	A	2979.50	PASS	AB=0.813;AC=25;AF=0.735;AN=34;BaseQRankSum=5.288;DP=501;FS=17.455;HRun=0;HaplotypeScore=28.8933;InbreedingCoeff=0.4375;MQ=11.40;MQ0=361;MQRankSum=0.847;QD=14.90;ReadPosRankSum=1.062;VQSLOD=-0.1906;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:69,0:6:15.05:0,15,699	1/1:5,1:1:3.01:105,3,0	./.	./.	1/1:11,5:4:6.02:210,6,0	0/0:8,0:4:9.03:0,9,473	0/0:24,0:4:9.03:0,9,410	./.	1/1:16,3:3:9.03:315,9,0	0/1:20,6:10:99:776,0,122	1/1:11,1:1:3.01:40,3,0	1/1:17,5:7:12.04:390,12,0	./.	./.	1/1:20,6:8:15.05:495,15,0	1/1:16,2:2:3.01:105,3,0	./.	./.	1/1:15,3:5:6.02:170,6,0	1/1:9,2:2:6.02:210,6,0	./.	./.	1/1:5,2:1:3.01:105,3,0	./.	0/0:17,0:2:6.02:0,6,340	1/1:10,1:1:3.01:105,3,0	1/1:8,0:1:3.01:82,3,0	./.
chr10	12606027	.	A	AG	1807.50	PASS	AB=0.698;AC=38;AF=0.679;AN=56;BaseQRankSum=-4.058;DP=374;FS=10.781;HRun=10;HaplotypeScore=36.9808;InbreedingCoeff=0.4547;MQ=54.40;MQ0=35;MQRankSum=-4.532;QD=7.93;ReadPosRankSum=0.567;VQSLOD=0.3233;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:27:44.86:0,45,360	1/1:3,3:4:6.02:64,6,0	0/1:47,0:11:1.70:2,0,36	0/0:46,0:9:1.78:0,2,68	1/1:3,7:8:7.57:67,8,0	1/1:6,0:4:3.01:31,3,0	1/1:5,0:4:3.01:31,3,0	0/0:3,0:5:8.15:0,8,24	1/1:2,5:7:12.01:119,12,0	1/1:10,6:13:18.04:188,18,0	0/1:4,3:8:15.61:54,0,16	1/1:0,6:6:15.04:159,15,0	1/1:3,5:7:17.88:173,18,0	1/1:8,3:6:3.01:32,3,0	1/1:13,2:10:14.88:120,15,0	1/1:4,4:4:9.02:95,9,0	0/1:4,8:11:0.33:169,0,0	0/1:1,5:6:9.58:112,0,10	0/0:5,0:14:21.32:0,21,78	0/0:6,0:14:14.26:0,14,41	0/0:3,0:17:21.07:0,21,65	1/1:5,7:11:0.82:104,1,0	1/1:5,8:13:0.70:196,1,0	1/1:5,2:5:3.01:32,3,0	0/0:14,0:11:20.96:0,21,172	1/1:8,6:10:17.88:173,18,0	1/1:2,2:3:3.01:32,3,0	1/1:4,1:3:3.01:32,3,0
chr10	12606534	.	AG	A	1682.65	PASS	AC=42;AF=0.840;AN=50;BaseQRankSum=2.704;DP=162;FS=33.824;HRun=8;HaplotypeScore=21.4489;InbreedingCoeff=0.5231;MQ=42.96;MQ0=23;MQRankSum=0.044;QD=14.76;ReadPosRankSum=0.022;VQSLOD=1.0445;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:36.11:0,36,430	1/1:0,5:4:9.01:87,9,0	0/0:7,0:1:2.98:0,3,21	0/0:11,0:4:3.01:0,3,36	1/1:0,8:7:18.03:174,18,0	1/1:2,2:4:6.01:58,6,0	./.	1/1:6,1:1:3:29,3,0	1/1:0,7:6:9.01:87,9,0	1/1:1,5:6:12.02:116,12,0	1/1:3,4:6:9.01:87,9,0	1/1:0,3:3:9.01:87,9,0	1/1:4,1:5:6:57,6,0	1/1:0,4:4:12.02:116,12,0	1/1:1,7:6:18.03:172,18,0	1/1:0,8:7:18.03:174,18,0	1/1:1,4:4:12.02:116,12,0	1/1:2,2:3:6.01:58,6,0	./.	1/1:4,2:5:3:29,3,0	1/1:1,4:4:9.01:87,9,0	1/1:1,1:1:3:29,3,0	1/1:2,4:5:6:58,6,0	./.	0/0:8,0:8:15.03:0,15,179	1/1:1,1:2:3:29,3,0	1/1:5,5:7:15.02:145,15,0	1/1:1,1:1:3:29,3,0
chr10	12606660	.	TAA	T	8614.79	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=3.148;DP=393;FS=3.075;HRun=11;HaplotypeScore=70.3487;InbreedingCoeff=0.8782;MQ=53.10;MQ0=7;MQRankSum=0.535;QD=23.86;ReadPosRankSum=2.100;VQSLOD=4.7946;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:44.63:0,45,523	1/1:0,8:8:15.03:160,15,0	0/0:4,0:2:5.51:0,6,50	0/0:3,0:2:2.92:0,3,17	1/1:7,13:17:36.01:370,36,0	1/1:1,13:13:36.09:382,36,0	1/1:0,10:10:24.06:255,24,0	1/1:3,18:19:42.01:421,42,0	1/1:2,13:14:36.09:383,36,0	1/1:6,20:24:60.13:638,60,0	1/1:0,21:21:60.15:638,60,0	1/1:2,11:13:27.06:287,27,0	1/1:4,9:13:24.05:255,24,0	1/1:1,10:11:27.07:287,27,0	1/1:0,10:10:30.08:319,30,0	1/1:1,14:15:27.06:287,27,0	1/1:0,14:15:14.81:301,15,0	1/1:1,11:13:8.64:255,9,0	1/1:3,15:18:45.07:469,45,0	1/1:2,18:18:48.12:510,48,0	1/1:2,12:14:30.07:319,30,0	1/1:2,16:18:36.04:438,36,0	1/1:0,14:14:33.08:350,33,0	1/1:0,5:5:15.04:160,15,0	0/0:7,0:7:18.06:0,18,277	1/1:2,18:20:54.09:556,54,0	1/1:3,12:13:24.06:255,24,0	1/1:1,10:11:30.07:319,30,0
chr10	12606851	.	GTGTGTTGTGATGGGTGTATA	G	2474.41	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.028;DP=664;FS=1.984;HRun=0;HaplotypeScore=328.0257;InbreedingCoeff=0.9833;MQ=73.32;MQ0=0;MQRankSum=-6.673;QD=53.79;ReadPosRankSum=2.635;VQSLOD=1.9585;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:63.61:0,64,4631	0/0:10,0:10:30.10:0,30,2388	0/0:43,0:40:99:0,104,6104	0/0:46,0:45:99:0,117,5881	0/0:21,0:21:51.17:0,51,4505	1/1:3,19:22:27.09:1409,27,0	1/1:4,20:24:24.08:1186,24,0	0/0:40,0:40:99:0,108,6820	0/0:25,0:25:66.19:0,66,4869	0/0:19,0:19:57.20:0,57,4965	0/0:12,0:12:33.58:0,34,2276	0/0:29,0:29:81.26:0,81,6580	0/0:23,0:23:63.22:0,63,5227	0/0:19,0:19:54.19:0,54,4373	0/0:29,0:29:84.29:0,84,6621	0/0:16,0:16:48.16:0,48,3303	0/0:19,0:19:54.19:0,54,4227	0/0:21,0:21:34.83:0,35,3705	0/0:19,0:19:54.18:0,54,3884	0/0:24,0:24:69.24:0,69,4865	0/0:51,0:51:99:0,138,11051	0/0:17,0:17:42.14:0,42,3680	0/0:22,0:22:54.19:0,54,4609	0/0:23,0:23:57.66:0,58,4535	0/0:7,0:7:18.06:0,18,1676	0/0:22,0:22:66.23:0,66,5211	0/0:29,0:28:78.24:0,78,5792	0/0:5,0:5:13.86:0,14,852
chr10	12608066	.	GCACACACACACA	G	6155.46	PASS	AB=0.791;AC=39;AF=0.722;AN=54;BaseQRankSum=5.406;DP=581;FS=14.240;HRun=0;HaplotypeScore=215.3251;InbreedingCoeff=0.5707;MQ=49.96;MQ0=10;MQRankSum=-5.622;QD=15.16;ReadPosRankSum=1.683;VQSLOD=2.7159;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:32:15.03:0,15,472	1/1:5,2:9:6.98:268,7,0	./.	0/1:35,0:18:0:0,0,0	0/1:11,7:18:0.11:0,0,0	0/0:5,0:10:12.04:0,12,414	0/0:25,0:28:28.81:0,29,847	0/0:21,0:21:0.98:0,1,33	1/1:12,11:23:24.08:715,24,0	1/1:10,6:18:21:598,21,0	1/1:11,11:23:9.97:282,10,0	1/1:14,5:22:24.07:601,24,0	1/1:16,6:23:12.04:377,12,0	1/1:14,10:26:12.04:375,12,0	1/1:7,3:10:9.03:311,9,0	1/1:3,7:11:15.05:496,15,0	1/1:15,8:22:6.02:207,6,0	0/1:7,7:15:27.95:279,0,28	1/1:15,1:15:2.10:101,2,0	1/1:18,2:24:5.97:41,6,0	0/0:19,0:25:0:0,0,0	1/1:12,6:21:0.80:2,1,0	1/1:14,9:23:2.58:97,3,0	1/1:9,9:18:9.03:269,9,0	0/0:17,0:17:27.52:0,28,830	1/1:17,3:21:14.28:431,14,0	1/1:11,9:20:12.04:394,12,0	1/1:1,5:6:9.03:311,9,0
chr10	12608138	.	ATGG	A	1288.69	PASS	AB=1.000;AC=40;AF=0.714;AN=56;BaseQRankSum=0.140;DP=385;FS=8.495;HRun=0;HaplotypeScore=99.4849;InbreedingCoeff=0.5017;MQ=37.53;MQ0=49;MQRankSum=-4.141;QD=5.15;ReadPosRankSum=1.759;VQSLOD=1.4942;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:25:39.02:0,39,544	1/1:6,0:6:8.69:53,9,0	0/0:14,0:5:15:0,15,135	0/0:33,0:15:38.86:0,39,284	1/1:8,0:8:2.34:22,2,0	0/1:31,0:27:99:154,0,182	0/0:30,0:27:23.69:0,24,237	1/1:18,4:8:17.14:122,17,0	1/1:10,0:10:14.75:98,15,0	1/1:18,0:12:26.90:221,27,0	1/1:11,0:8:8.67:54,9,0	1/1:11,0:11:8.27:52,8,0	1/1:10,0:10:7.53:57,8,0	0/0:7,0:7:0:0,0,0	0/0:6,0:4:0:0,0,0	1/1:8,0:8:2.70:18,3,0	1/1:8,0:7:8.89:59,9,0	1/1:5,0:5:8.56:53,9,0	0/1:13,0:7:8.29:63,0,8	1/1:8,0:5:2.59:17,3,0	1/1:16,0:9:2.82:23,3,0	1/1:11,0:10:8.50:73,9,0	1/1:13,0:10:3.25:18,3,0	1/1:11,0:11:2.94:18,3,0	0/0:16,0:13:39.02:0,39,489	1/1:16,0:12:23.23:190,23,0	1/1:11,0:11:11.70:73,12,0	1/1:3,0:3:2.94:18,3,0
chr10	12608856	.	T	TACACACAC	5770.59	PASS	AB=0.948;AC=45;AF=0.804;AN=56;BaseQRankSum=1.363;DP=505;FS=5.311;HRun=0;HaplotypeScore=189.2074;InbreedingCoeff=0.3522;MQ=52.60;MQ0=8;MQRankSum=-1.558;QD=13.67;ReadPosRankSum=-4.284;VQSLOD=2.8352;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:78.23:0,78,2025	1/1:10,0:10:12.31:145,12,0	0/1:16,0:5:4.99:5,0,155	0/0:25,0:8:23.33:0,23,461	1/1:16,0:16:8.69:89,9,0	0/1:10,0:10:11.70:12,0,78	0/1:16,0:16:95.12:168,0,95	1/1:26,0:26:50.76:500,51,0	1/1:7,15:27:2.49:121,2,0	1/1:18,0:17:30.72:468,31,0	1/1:12,0:12:10.37:147,10,0	1/1:14,0:13:3.01:113,3,0	1/1:6,0:6:2.73:119,3,0	1/1:11,0:11:11.81:189,12,0	1/1:18,0:18:14.44:279,14,0	1/1:14,0:14:1.69:4,2,0	1/1:21,0:20:13.41:276,13,0	1/1:20,0:20:23.77:595,24,0	1/1:10,0:11:17.13:208,17,0	0/1:22,0:26:13.58:193,0,14	0/1:24,0:28:37.47:220,0,37	1/1:21,0:21:9.93:76,10,0	1/1:20,0:19:16.60:124,17,0	1/1:21,0:21:12.92:174,13,0	0/0:16,0:16:42.14:0,42,1136	1/1:12,0:11:19.81:279,20,0	1/1:13,10:23:35.83:1004,36,0	1/1:5,0:5:10.85:261,11,0
chr10	12608858	.	CAT	C	3431.21	PASS	AB=1.000;AC=37;AF=0.661;AN=56;BaseQRankSum=0.155;DP=508;FS=18.763;HRun=0;HaplotypeScore=130.5284;InbreedingCoeff=0.0742;MQ=52.26;MQ0=9;MQRankSum=1.750;QD=8.45;ReadPosRankSum=2.099;VQSLOD=2.2101;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:81.24:0,81,1301	1/1:10,0:10:14.45:88,14,0	0/0:16,0:5:11.42:0,11,137	0/0:25,0:8:23.92:0,24,347	0/1:15,0:15:30.33:82,0,30	1/1:6,4:10:26.95:220,27,0	1/1:11,5:16:18:299,18,0	1/1:26,0:26:27.91:413,28,0	0/1:24,0:24:3.66:17,0,4	0/1:20,0:19:29.45:196,0,29	1/1:12,0:12:20.95:168,21,0	1/1:12,0:11:8.92:67,9,0	1/1:6,0:6:10.77:73,11,0	1/1:11,0:11:1.93:123,2,0	0/1:17,0:17:16.05:108,0,16	1/1:13,0:13:8.94:74,9,0	0/1:22,0:21:29.60:86,0,30	0/1:21,0:21:33.13:185,0,33	1/1:12,0:12:21.67:166,22,0	0/1:27,0:27:55.23:183,0,55	0/1:29,0:28:22.23:314,0,22	1/1:21,0:21:14.51:125,15,0	1/1:20,0:19:17.82:145,18,0	1/1:22,0:22:2.24:123,2,0	0/0:17,0:17:41.03:0,41,548	0/1:12,0:11:25.07:92,0,25	0/1:23,0:23:32.10:43,0,32	0/1:5,0:5:10.13:39,0,10
chr10	12608862	.	CAT	C	3430.91	PASS	AB=0.973;AC=35;AF=0.625;AN=56;BaseQRankSum=-0.843;DP=528;FS=12.482;HRun=0;HaplotypeScore=131.8807;InbreedingCoeff=-0.2477;MQ=51.70;MQ0=9;MQRankSum=0.756;QD=7.04;ReadPosRankSum=0.770;VQSLOD=2.8187;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:44,0:44:40.22:40,0,298	1/1:9,0:9:9.87:68,10,0	0/0:16,0:5:4.98:0,5,66	0/0:25,0:8:16.96:0,17,161	0/1:19,0:19:48.38:76,0,48	0/1:9,4:13:0.17:210,0,0	0/1:12,5:17:9.65:252,0,10	1/1:22,0:22:45.78:362,46,0	0/1:25,0:25:4.26:17,0,4	0/1:22,0:21:22.45:217,0,22	1/1:13,0:13:23.95:192,24,0	1/1:12,0:11:8.91:66,9,0	1/1:9,0:9:10.79:76,11,0	0/1:10,0:10:1.12:96,0,1	0/1:19,0:19:15.16:111,0,15	1/1:13,0:13:8.95:75,9,0	0/1:23,0:22:27.34:102,0,27	0/1:23,0:23:33.52:178,0,34	1/1:13,0:13:10.44:157,10,0	0/1:30,0:30:55.42:185,0,55	0/1:32,0:31:18.94:335,0,19	1/1:19,0:19:11.98:99,12,0	1/1:18,0:17:17.78:138,18,0	0/1:22,0:22:0.60:103,0,1	0/1:20,0:20:59.96:60,0,92	0/1:12,0:11:7.59:119,0,8	0/1:23,0:23:28.53:60,0,29	0/1:5,0:5:10.96:38,0,11
chr10	12608864	.	TAC	T	580.12	PASS	AB=1.000;AC=8;AF=0.154;AN=52;BaseQRankSum=-3.458;DP=535;FS=2.784;HRun=0;HaplotypeScore=141.8351;InbreedingCoeff=0.4167;MQ=51.04;MQ0=9;MQRankSum=0.926;QD=4.64;ReadPosRankSum=2.718;VQSLOD=3.1060;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:22,21:43:33.09:367,33,0	0/0:9,0:9:5.96:0,6,43	./.	./.	0/0:20,0:20:20:0,20,182	0/1:14,0:14:23.80:24,0,58	0/1:16,0:16:21.03:21,0,101	0/0:22,0:22:14.08:0,14,87	0/0:25,0:25:6.41:0,6,45	0/0:24,0:23:35.47:0,35,330	0/1:12,0:12:0:0,0,0	0/0:12,0:11:0.47:0,0,1	0/0:9,0:9:6.62:0,7,38	0/0:9,0:9:7.56:0,8,73	0/0:18,0:18:15.13:0,15,123	0/0:13,0:13:0.47:0,0,1	0/0:22,0:21:11.99:0,12,140	0/0:23,0:23:20:0,20,213	0/0:14,0:14:19.40:0,19,150	0/0:30,0:30:38.79:0,39,399	0/0:31,0:30:25.26:0,25,276	0/1:19,0:19:0.01:0,0,0	0/0:20,0:19:2.63:0,3,23	0/0:22,0:22:6.01:0,6,68	1/1:6,14:21:9.84:291,10,0	0/0:15,0:14:20.66:0,21,167	0/0:25,0:25:15.92:0,16,155	0/0:5,0:5:3.01:0,3,39
chr10	12608885	.	A	ACACACACACA	4816.18	PASS	AB=1.000;AC=46;AF=0.821;AN=56;BaseQRankSum=-6.198;DP=591;FS=7.570;HRun=0;HaplotypeScore=188.9902;InbreedingCoeff=0.3239;MQ=50.20;MQ0=15;MQRankSum=-0.951;QD=9.14;ReadPosRankSum=-4.008;VQSLOD=2.2493;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:37.31:0,37,737	1/1:9,0:9:6.02:96,6,0	1/1:21,0:8:0.89:2,1,0	0/1:31,0:14:0:0,0,0	1/1:26,0:26:12.04:227,12,0	0/1:18,0:18:9.45:9,0,114	0/1:17,0:16:9.11:9,0,163	1/1:18,0:18:14.48:161,14,0	1/1:25,0:25:6.84:116,7,0	1/1:29,0:27:38.22:482,38,0	1/1:12,0:12:6:95,6,0	1/1:15,0:14:2.90:35,3,0	1/1:5,5:11:7.56:170,8,0	1/1:9,0:9:8.76:209,9,0	1/1:20,0:20:18.01:331,18,0	1/1:14,0:14:5.95:147,6,0	1/1:23,0:22:21.46:377,21,0	1/1:21,0:21:30.25:318,30,0	1/1:21,0:21:22.52:263,23,0	0/1:29,0:29:25.77:383,0,26	0/1:40,0:39:12.98:274,0,13	0/1:21,0:21:0.01:0,0,0	1/1:21,0:20:8.72:71,9,0	1/1:23,0:23:15.03:355,15,0	0/0:27,0:27:30.10:0,30,665	1/1:21,0:20:19.87:262,20,0	1/1:27,0:27:23.81:389,24,0	1/1:5,0:5:3.01:37,3,0
chr10	12608887	.	A	ACACACA	3221.92	PASS	AB=1.000;AC=47;AF=0.839;AN=56;BaseQRankSum=-5.058;DP=598;FS=6.222;HRun=0;HaplotypeScore=158.2711;InbreedingCoeff=0.3678;MQ=50.64;MQ0=15;MQRankSum=-1.991;QD=6.02;ReadPosRankSum=-3.699;VQSLOD=1.2668;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:31.03:0,31,398	1/1:8,0:8:6.02:96,6,0	1/1:22,0:10:0.89:2,1,0	0/1:30,0:13:0:0,0,0	1/1:17,8:26:11.58:157,12,0	0/1:17,0:17:9.93:10,0,58	0/1:18,0:17:9.42:9,0,78	1/1:20,0:20:13.27:100,13,0	1/1:25,0:25:6.84:98,7,0	1/1:28,0:26:37.88:363,38,0	1/1:12,0:12:6:71,6,0	1/1:15,0:14:3.01:35,3,0	1/1:11,0:11:7.25:101,7,0	1/1:9,0:9:8.99:160,9,0	1/1:22,0:22:18.01:259,18,0	1/1:16,0:16:2.82:50,3,0	1/1:23,0:22:20.70:218,21,0	1/1:21,0:21:30.42:218,30,0	1/1:22,0:22:20.91:204,21,0	1/1:29,0:29:1.67:288,2,0	0/1:41,0:40:3.57:238,0,4	0/1:21,0:21:0:0,0,0	1/1:21,0:20:8.97:71,9,0	1/1:24,0:24:11.97:118,12,0	0/0:27,0:27:30.10:0,30,417	1/1:22,0:21:19.52:167,20,0	1/1:27,0:27:23.78:311,24,0	1/1:5,0:5:2.94:18,3,0
chr10	12612030	.	A	AT	10452.28	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-10.577;DP=622;FS=3.898;HRun=8;HaplotypeScore=65.6654;InbreedingCoeff=0.9912;MQ=76.72;MQ0=0;MQRankSum=-3.974;QD=26.13;ReadPosRankSum=4.088;VQSLOD=5.6282;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,114,1033	1/1:2,5:8:14.88:153,15,0	0/0:24,1:24:21.99:0,22,406	0/0:21,0:20:14.39:0,14,267	1/1:6,22:28:69.20:788,69,0	1/1:13,0:13:29.46:121,29,0	1/1:27,0:27:66.96:276,67,0	0/0:32,0:32:72:0,72,649	1/1:3,24:27:63.19:727,63,0	1/1:3,19:22:60.17:681,60,0	1/1:4,17:21:39.07:435,39,0	1/1:3,15:18:45.13:519,45,0	1/1:2,16:18:42.12:485,42,0	1/1:2,13:15:33.10:381,33,0	1/1:0,17:17:48.14:554,48,0	1/1:3,10:13:30.09:346,30,0	1/1:2,28:30:81.24:935,81,0	1/1:3,13:16:17.63:443,18,0	0/0:29,0:29:74.99:0,75,672	0/0:26,0:26:65.97:0,66,594	0/0:24,0:24:57:0,57,516	1/1:1,36:37:93.19:1044,93,0	1/1:5,22:27:57.17:658,57,0	1/1:1,8:9:24.07:277,24,0	0/0:25,0:25:72.04:0,72,659	1/1:1,16:18:51:557,51,0	1/1:3,23:26:69.21:796,69,0	1/1:1,9:10:24.07:277,24,0
chr10	12612033	.	T	TTG	1821.40	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=-8.534;DP=626;FS=3.781;HRun=0;HaplotypeScore=108.0124;InbreedingCoeff=0.8005;MQ=76.11;MQ0=0;MQRankSum=-4.126;QD=36.43;ReadPosRankSum=0.474;VQSLOD=5.8804;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,123,1813	0/1:6,0:6:7.79:8,0,17	0/0:25,0:24:59.21:0,59,811	0/0:21,0:20:36.06:0,36,634	0/0:28,0:28:63.72:0,64,279	1/1:0,14:14:33.11:593,33,0	1/1:2,28:30:75.25:1347,75,0	0/0:29,0:29:87.26:0,87,1239	0/0:26,0:26:52.61:0,53,202	0/0:22,0:23:50.33:0,50,219	0/0:20,0:20:44.54:0,45,226	0/0:17,0:17:39.31:0,39,163	0/0:18,0:18:34.08:0,34,129	0/0:17,0:17:33.43:0,33,160	0/0:19,0:19:38.52:0,39,141	0/0:13,0:13:31.20:0,31,151	0/0:30,0:30:65.94:0,66,244	0/0:16,0:16:35.34:0,35,167	0/0:30,0:30:90.26:0,90,1279	0/0:29,0:29:78.22:0,78,1112	0/0:24,0:24:69.16:0,69,970	0/0:37,0:37:76.22:0,76,288	0/0:25,0:25:54.01:0,54,235	0/0:8,0:8:17.76:0,18,58	0/0:24,0:24:72.24:0,72,1102	0/0:19,0:19:15.18:0,15,134	0/0:25,0:25:57.06:0,57,218	0/0:11,0:11:23.76:0,24,109
chr10	12612288	.	AAC	A	126.89	PASS	AB=0.966;AC=10;AF=0.179;AN=56;BaseQRankSum=3.514;DP=560;FS=0.000;HRun=0;HaplotypeScore=83.2074;InbreedingCoeff=-0.0310;MQ=67.22;MQ0=5;MQRankSum=1.106;QD=0.73;ReadPosRankSum=0.189;VQSLOD=1.0667;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:34,1:35:44.28:44,0,627	0/1:11,0:11:9.41:9,0,288	0/0:30,0:22:8.32:0,8,67	0/0:26,0:15:2.97:0,3,20	0/0:20,0:21:42.13:0,42,617	0/0:16,0:18:8.95:0,9,79	0/0:16,0:18:11.90:0,12,121	0/0:20,0:19:4.26:0,4,61	1/1:12,2:18:11.86:116,12,0	0/1:20,0:20:28.27:28,0,462	0/1:18,0:19:27:27,0,207	0/1:16,0:16:6.85:7,0,295	0/0:15,1:16:3.74:0,4,440	0/0:14,0:14:27.07:0,27,365	0/0:17,0:19:23.48:0,23,262	0/0:10,0:11:3.84:0,4,184	0/1:15,0:15:1.74:2,0,356	0/0:14,0:14:30.10:0,30,446	0/0:10,0:13:7.23:0,7,75	0/0:9,0:21:5.90:0,6,41	0/0:42,0:43:38.18:0,38,379	0/0:24,1:25:20.03:0,20,657	0/1:20,2:22:21.83:22,0,514	0/0:24,4:28:17.24:0,17,646	0/1:14,2:16:6.83:7,0,337	0/0:16,0:16:29.74:0,30,417	0/0:21,0:22:24.89:0,25,441	0/0:9,0:9:18.06:0,18,262
chr10	12612334	.	TAC	T	250.78	PASS	AB=0.929;AC=5;AF=0.089;AN=56;BaseQRankSum=4.156;DP=669;FS=13.071;HRun=0;HaplotypeScore=88.5207;InbreedingCoeff=0.7538;MQ=58.95;MQ0=15;MQRankSum=-0.183;QD=4.25;ReadPosRankSum=0.028;VQSLOD=1.5993;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:36:75.23:0,75,1198	0/0:9,0:9:23.67:0,24,349	0/0:17,0:10:23.94:0,24,295	0/0:30,0:13:36.12:0,36,574	0/0:24,0:24:54.17:0,54,843	1/1:7,20:26:21.06:249,21,0	1/1:7,12:19:8.83:114,9,0	0/0:29,0:26:54.18:0,54,892	0/0:24,0:23:60.19:0,60,945	0/0:30,0:28:57.19:0,57,925	0/0:21,0:21:60.18:0,60,931	0/0:15,0:15:36.12:0,36,597	0/0:26,0:26:57.19:0,57,938	0/0:16,0:16:36.11:0,36,567	0/0:19,0:19:45.15:0,45,744	0/0:16,0:16:39.13:0,39,641	0/0:24,0:24:48.14:0,48,755	0/0:15,0:15:33.11:0,33,542	0/0:18,0:17:39.07:0,39,583	0/0:24,0:24:36.01:0,36,542	0/0:55,0:55:99:0,117,1806	0/0:31,0:31:69.22:0,69,1114	0/0:31,1:32:2.56:0,3,1094	0/0:28,0:27:57.18:0,57,903	0/0:14,0:14:30.10:0,30,491	0/0:31,0:29:68.45:0,68,1079	0/0:25,0:25:57.19:0,57,937	0/1:12,1:12:1.72:2,0,494
chr10	12612801	.	ATG	A	645.65	PASS	AB=0.931;AC=6;AF=0.107;AN=56;BaseQRankSum=3.797;DP=366;FS=18.830;HRun=0;HaplotypeScore=63.2778;InbreedingCoeff=0.6597;MQ=68.47;MQ0=1;MQRankSum=-1.710;QD=11.74;ReadPosRankSum=0.367;VQSLOD=1.5694;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:36.12:0,36,582	0/0:9,0:9:24.08:0,24,401	0/0:15,0:14:30.10:0,30,485	0/0:16,0:12:24.07:0,24,367	0/0:19,0:19:54.17:0,54,858	1/1:3,13:16:36.12:458,36,0	1/1:2,9:11:24.08:305,24,0	0/0:30,0:30:57.19:0,57,954	0/1:10,1:11:5.06:5,0,414	0/1:16,1:17:3.01:3,0,649	0/0:20,0:20:48.16:0,48,795	0/0:5,0:5:15.05:0,15,251	0/0:12,0:12:29.77:0,30,457	0/0:5,0:5:12.04:0,12,195	0/0:6,0:6:18.06:0,18,301	0/0:5,0:5:15.05:0,15,251	0/0:17,0:17:39.13:0,39,640	0/0:14,0:14:24.07:0,24,365	0/0:14,0:14:33.09:0,33,504	0/0:20,0:20:60.19:0,60,979	0/0:9,0:9:18.06:0,18,301	0/0:8,0:8:21.07:0,21,351	0/0:9,0:9:21.07:0,21,351	0/0:5,0:5:9.03:0,9,151	0/0:6,0:6:15.05:0,15,251	0/0:14,0:14:39.13:0,39,647	0/0:24,0:24:57.18:0,57,921	0/0:15,0:15:38.25:0,38,623
chr10	12612840	.	CAT	C	4159.50	PASS	AB=0.625;AC=47;AF=0.870;AN=54;BaseQRankSum=1.354;DP=283;FS=9.841;HRun=0;HaplotypeScore=56.4692;InbreedingCoeff=0.5706;MQ=75.03;MQ0=2;MQRankSum=-0.808;QD=17.78;ReadPosRankSum=1.745;VQSLOD=2.5956;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:18.06:0,18,288	1/1:1,6:7:15.05:183,15,0	./.	0/0:22,0:12:3.52:0,4,50	1/1:5,12:17:27.08:330,27,0	0/1:6,0:15:3.12:60,0,3	1/1:5,0:9:5.68:28,6,0	1/1:12,8:21:29.92:333,30,0	1/1:5,6:11:12.04:147,12,0	1/1:3,6:9:18.06:220,18,0	1/1:2,6:8:9.03:110,9,0	1/1:1,3:4:9.03:110,9,0	1/1:4,5:9:12.04:147,12,0	1/1:1,4:5:9.03:110,9,0	1/1:5,3:8:9.03:110,9,0	1/1:2,5:7:15.05:183,15,0	1/1:5,12:17:30.09:367,30,0	1/1:1,7:8:12.04:147,12,0	1/1:5,6:10:26.83:279,27,0	1/1:8,3:11:12.04:146,12,0	1/1:4,1:5:6:54,6,0	1/1:1,2:3:3.01:37,3,0	1/1:3,3:6:6.02:73,6,0	1/1:0,3:3:6.02:73,6,0	0/0:6,0:6:12.03:0,12,171	1/1:4,11:15:30.08:354,30,0	1/1:3,8:12:14.79:160,15,0	1/1:3,10:13:33.10:399,33,0
chr10	12613771	.	CAGAGAG	C	1430.19	PASS	AB=0.870;AC=4;AF=0.071;AN=56;BaseQRankSum=7.914;DP=764;FS=0.000;HRun=0;HaplotypeScore=169.6833;InbreedingCoeff=0.5585;MQ=82.91;MQ0=18;MQRankSum=-4.850;QD=10.00;ReadPosRankSum=-2.785;VQSLOD=2.4267;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:74.98:0,75,2775	0/0:5,0:5:15.05:0,15,508	0/1:98,0:38:24.36:24,0,426	0/0:125,0:62:73.65:0,74,1014	0/0:16,0:16:36.11:0,36,1068	0/1:13,7:20:4.16:453,0,4	1/1:5,19:24:49.17:1068,49,0	0/0:34,0:35:75.24:0,75,2059	0/0:28,0:29:78.27:0,78,2441	0/0:11,0:11:30.10:0,30,922	0/0:12,0:12:24.08:0,24,801	0/0:13,0:13:33.08:0,33,962	0/0:12,0:12:30.08:0,30,901	0/0:14,0:15:39.12:0,39,1173	0/0:14,0:16:38.98:0,39,1099	0/0:19,0:19:36.12:0,36,1178	0/0:31,0:31:64.56:0,65,1918	0/0:19,0:19:54.66:0,55,1674	0/0:20,0:20:51.05:0,51,1393	0/0:20,0:20:48.15:0,48,1243	0/0:35,0:35:83.08:0,83,2508	0/0:14,0:14:33.11:0,33,1124	0/0:13,0:13:39.13:0,39,1254	0/0:25,0:24:63.16:0,63,1978	0/0:16,0:16:39.12:0,39,1187	0/0:21,0:22:63.21:0,63,1953	0/0:38,0:38:99:0,111,3387	0/0:14,0:14:39.13:0,39,1238
chr10	12614081	.	TCTC	T	1718.37	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.008;DP=565;FS=10.847;HRun=0;HaplotypeScore=78.7055;InbreedingCoeff=0.9671;MQ=88.10;MQ0=0;MQRankSum=-1.970;QD=42.96;ReadPosRankSum=2.890;VQSLOD=4.8936;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:45:99:0,129,2920	0/0:11,0:11:33.04:0,33,667	0/0:28,0:28:81.22:0,81,1657	0/0:25,0:25:72.17:0,72,1370	0/0:23,0:23:65.83:0,66,1386	1/1:0,29:29:78.27:1329,78,0	1/1:0,11:11:30.10:511,30,0	0/0:30,0:30:78.23:0,78,1578	0/0:18,0:18:54.19:0,54,1239	0/0:24,0:24:69.23:0,69,1527	0/0:19,0:19:54.65:0,55,1184	0/0:15,0:15:45.12:0,45,948	0/0:14,0:14:42.13:0,42,924	0/0:8,0:8:24.08:0,24,548	0/0:25,0:25:75.26:0,75,1690	0/0:20,0:20:60.19:0,60,1299	0/0:17,0:17:48.15:0,48,1061	0/0:14,0:14:39.05:0,39,805	0/0:16,0:16:48.16:0,48,1104	0/0:27,0:27:78.25:0,78,1754	0/0:35,0:35:99:0,102,2344	0/0:10,0:10:30.09:0,30,644	0/0:8,0:8:21.04:0,21,435	0/0:15,0:15:45.15:0,45,1037	0/0:16,0:16:42.14:0,42,968	0/0:21,0:21:63.20:0,63,1370	0/0:34,0:32:99:0,102,2227	0/0:6,0:6:9.02:0,9,164
chr10	12614295	.	GTT	G	10203.56	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=7.906;DP=450;FS=4.146;HRun=8;HaplotypeScore=64.8912;InbreedingCoeff=0.9311;MQ=72.36;MQ0=2;MQRankSum=-0.807;QD=28.91;ReadPosRankSum=1.550;VQSLOD=4.8985;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:96.33:0,96,1621	1/1:1,5:6:15.04:183,15,0	0/0:13,0:11:24.08:0,24,377	0/0:9,0:8:18.06:0,18,272	1/1:5,35:40:99:1208,99,0	0/0:17,0:17:48.16:0,48,812	0/0:8,0:8:21.02:0,21,323	1/1:4,21:24:63.18:757,63,0	1/1:2,14:16:30.09:366,30,0	1/1:6,17:23:54.15:644,54,0	1/1:2,21:23:46.16:698,46,0	1/1:1,6:7:15.05:183,15,0	1/1:0,5:5:6.02:73,6,0	1/1:0,6:5:15.05:183,15,0	1/1:2,13:15:30.09:366,30,0	1/1:1,6:7:15.05:183,15,0	1/1:1,20:21:48.15:586,48,0	1/1:3,16:19:37.11:607,37,0	1/1:4,18:22:54.16:655,54,0	1/1:3,28:31:78.24:951,78,0	1/1:0,10:10:24.08:293,24,0	1/1:2,8:10:24.07:293,24,0	1/1:2,4:6:9.03:110,9,0	1/1:1,8:9:24.07:293,24,0	0/0:16,0:16:45.15:0,45,761	1/1:4,19:23:57.17:695,57,0	1/1:1,26:27:66.21:805,66,0	1/1:0,2:2:6.02:73,6,0
chr10	12617904	.	GGGT	G	10156.57	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=6.027;DP=456;FS=8.264;HRun=0;HaplotypeScore=71.2714;InbreedingCoeff=0.9266;MQ=56.50;MQ0=3;MQRankSum=0.149;QD=27.38;ReadPosRankSum=3.919;VQSLOD=3.8429;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:93.32:0,93,1934	1/1:2,6:8:12.04:178,12,0	0/0:21,0:16:39.09:0,39,738	0/0:20,0:15:37.30:0,37,739	1/1:4,7:11:21.07:311,21,0	1/1:1,6:6:12.04:178,12,0	1/1:1,13:14:30.10:445,30,0	1/1:4,7:11:21.05:291,21,0	1/1:4,14:18:36.12:534,36,0	1/1:5,17:14:33.07:430,33,0	1/1:1,3:3:9.03:133,9,0	1/1:3,12:15:33.11:490,33,0	1/1:4,16:19:38.25:577,38,0	1/1:5,6:10:15.05:223,15,0	1/1:2,11:12:26.87:395,27,0	1/1:1,14:14:30.10:445,30,0	1/1:6,32:37:72.24:1068,72,0	1/1:3,12:15:30.06:445,30,0	1/1:6,4:10:12.04:178,12,0	1/1:2,6:8:18.06:267,18,0	1/1:17,29:46:90.08:1280,90,0	1/1:2,11:12:33.11:489,33,0	1/1:3,4:7:12.04:178,12,0	1/1:0,27:27:60.20:890,60,0	0/0:6,0:6:15.05:0,15,311	1/1:5,8:12:18.03:243,18,0	1/1:5,12:12:21.07:307,21,0	1/1:3,5:5:12.04:178,12,0
chr10	12618918	.	CAG	C	1210.08	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.269;DP=653;FS=3.501;HRun=0;HaplotypeScore=79.6547;InbreedingCoeff=0.9915;MQ=69.40;MQ0=0;MQRankSum=-1.905;QD=35.59;ReadPosRankSum=-0.031;VQSLOD=5.4222;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:61,0:61:99:0,175,3224	0/0:10,0:10:30.10:0,30,579	0/0:20,0:20:57.20:0,57,1071	0/0:28,0:26:71.76:0,72,1260	0/0:22,0:22:66.21:0,66,1232	1/1:0,12:12:36.12:551,36,0	1/1:1,21:22:51.17:781,51,0	0/0:17,0:17:51.17:0,51,986	0/0:30,0:30:87.30:0,87,1668	0/0:22,0:22:63.22:0,63,1217	0/0:22,0:22:66.23:0,66,1275	0/0:23,0:23:66.23:0,66,1265	0/0:15,0:15:39.13:0,39,753	0/0:25,0:25:75.24:0,75,1414	0/0:27,0:27:81.26:0,81,1510	0/0:19,0:19:57.20:0,57,1101	0/0:43,0:43:99:0,129,2491	0/0:19,0:19:54.19:0,54,1043	0/0:23,0:23:66.22:0,66,1243	0/0:22,0:22:66.23:0,66,1265	0/0:36,0:36:99:0,108,2086	0/0:34,0:34:96.32:0,96,1821	0/0:20,0:20:60.15:0,60,1080	0/0:21,0:21:63.18:0,63,1139	0/0:22,0:22:60.16:0,60,1059	0/0:15,0:15:45.15:0,45,862	0/0:18,0:18:54.19:0,54,1040	0/0:5,0:5:15.05:0,15,290
chr10	12623597	.	GA	G	1812.55	PASS	AC=48;AF=0.889;AN=54;BaseQRankSum=1.046;DP=247;FS=11.627;HRun=11;HaplotypeScore=31.0923;InbreedingCoeff=0.4546;MQ=44.04;MQ0=21;MQRankSum=-2.659;QD=9.44;ReadPosRankSum=2.590;VQSLOD=0.6543;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:35:63.72:0,64,579	1/1:5,4:7:17.97:146,18,0	0/0:1,0:1:0.89:0,1,2	./.	1/1:5,4:9:8.86:74,9,0	1/1:5,6:9:14.89:114,15,0	1/1:6,1:5:2.93:19,3,0	1/1:4,1:3:2.98:25,3,0	1/1:3,3:4:8.95:68,9,0	1/1:2,7:7:17.86:138,18,0	1/1:4,7:11:14.95:123,15,0	1/1:1,2:1:3:25,3,0	1/1:2,1:2:2.99:25,3,0	1/1:3,1:4:2.99:25,3,0	1/1:2,5:6:5.98:49,6,0	1/1:2,1:1:3:25,3,0	1/1:7,4:9:10.63:79,11,0	1/1:2,1:3:2.99:25,3,0	1/1:5,3:5:11.97:96,12,0	1/1:5,11:16:23.96:197,24,0	1/1:8,4:10:14.95:121,15,0	1/1:7,2:7:2.94:25,3,0	1/1:3,6:9:17.90:148,18,0	1/1:3,3:6:8.98:74,9,0	0/0:11,0:8:15:0,15,147	1/1:4,8:10:17.96:148,18,0	1/1:3,6:7:8.98:73,9,0	1/1:6,4:8:13.97:98,14,0
chr10	12623608	.	AG	A	950.81	PASS	AB=0.934;AC=39;AF=0.722;AN=54;BaseQRankSum=2.270;DP=278;FS=1.441;HRun=1;HaplotypeScore=36.0033;InbreedingCoeff=-0.0492;MQ=43.28;MQ0=20;MQRankSum=-1.806;QD=3.59;ReadPosRankSum=1.081;VQSLOD=0.1914;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:43,0:39:20.12:20,0,556	0/1:8,1:7:4.14:48,0,4	0/0:2,0:1:2.22:0,2,7	./.	0/1:11,0:11:2.23:30,0,2	1/1:8,2:8:12.54:70,13,0	0/1:5,1:3:8.16:8,0,10	0/1:9,1:8:18.64:19,0,38	1/1:4,1:3:3.98:12,4,0	1/1:15,0:11:12.65:92,13,0	0/1:10,0:10:25.38:28,0,25	1/1:5,0:4:10.91:66,11,0	0/1:6,0:3:1.52:2,0,13	1/1:6,0:5:7.68:39,8,0	1/1:6,0:5:6.29:18,6,0	1/1:3,1:2:2.63:21,3,0	1/1:6,7:11:4.13:18,4,0	0/0:3,0:2:1.56:0,2,17	1/1:6,2:5:9.30:86,9,0	1/1:15,0:15:25.61:114,26,0	0/1:8,4:9:6.24:50,0,6	0/1:5,1:5:6.75:32,0,7	1/1:9,1:10:20.74:71,21,0	1/1:12,0:11:21.06:119,21,0	0/1:10,0:7:5.08:5,0,117	0/1:13,0:9:7.11:23,0,7	1/1:9,0:8:11.26:37,11,0	1/1:10,1:9:1.70:61,2,0
chr10	12626496	.	GA	G	842.11	PASS	AB=0.571;AC=7;AF=0.135;AN=52;BaseQRankSum=2.432;DP=482;FS=13.349;HRun=10;HaplotypeScore=51.5773;InbreedingCoeff=0.8134;MQ=39.50;MQ0=94;MQRankSum=-1.127;QD=12.20;ReadPosRankSum=0.784;VQSLOD=1.4555;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:16:33.78:0,34,381	0/0:10,0:8:24.02:0,24,251	./.	./.	0/0:31,0:31:72.15:0,72,783	0/0:10,0:9:20.99:0,21,207	0/0:9,0:7:18.05:0,18,198	0/1:5,15:13:6.16:181,0,6	0/0:22,0:22:47.96:0,48,510	0/0:34,0:30:81.05:0,81,871	0/0:30,0:26:63.17:0,63,697	0/0:13,0:10:18.04:0,18,199	0/0:14,0:14:24.02:0,24,252	0/0:12,0:10:15:0,15,152	0/0:14,0:9:21.06:0,21,232	0/0:17,0:16:42.11:0,42,464	0/0:9,0:7:18.05:0,18,199	0/0:15,0:10:30.08:0,30,332	1/1:2,15:15:38.99:339,39,0	1/1:5,23:23:20.85:409,21,0	1/1:0,4:3:6:52,6,0	0/0:21,1:19:16.05:0,16,392	0/0:22,0:21:48.10:0,48,518	0/0:17,0:13:30.08:0,30,331	0/0:12,0:9:24.02:0,24,252	0/0:20,0:19:47.95:0,48,502	0/0:16,0:16:32.84:0,33,345	0/0:14,0:11:33.09:0,33,365
chr10	12627451	.	TA	T	10389.28	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=0.390;DP=510;FS=20.149;HRun=9;HaplotypeScore=61.9131;InbreedingCoeff=0.9869;MQ=63.84;MQ0=1;MQRankSum=1.654;QD=23.35;ReadPosRankSum=4.513;VQSLOD=3.6518;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:18.25:0,18,223	1/1:1,5:6:15.01:137,15,0	0/0:14,0:13:35.58:0,36,377	0/0:21,0:19:45.02:0,45,480	1/1:1,28:29:84:761,84,0	1/1:2,15:17:45.02:412,45,0	1/1:3,7:10:21.01:192,21,0	1/1:3,22:24:62.98:568,63,0	1/1:2,21:23:57.03:522,57,0	1/1:1,22:23:66.04:603,66,0	1/1:2,28:30:77.99:705,78,0	1/1:0,6:6:15.01:137,15,0	1/1:1,14:15:42.02:384,42,0	1/1:1,11:12:33.02:302,33,0	1/1:1,12:13:33.01:302,33,0	1/1:1,18:19:54.03:494,54,0	1/1:5,19:24:50.77:483,51,0	1/1:2,16:18:39.02:357,39,0	1/1:0,14:14:42.01:381,42,0	1/1:2,37:39:99:905,99,0	1/1:4,11:15:24.01:220,24,0	1/1:0,17:17:51.03:466,51,0	1/1:2,23:24:56.71:521,57,0	1/1:1,13:14:33.02:302,33,0	0/0:18,0:17:42.12:0,42,485	1/1:0,18:18:54.03:494,54,0	1/1:3,17:20:42.02:384,42,0	1/1:0,13:13:39.02:357,39,0
chr10	12628191	.	GAAAT	G	10553.47	PASS	AB=0.693;AC=39;AF=0.696;AN=56;BaseQRankSum=12.981;DP=469;FS=12.485;HRun=0;HaplotypeScore=156.1834;InbreedingCoeff=0.5440;MQ=42.16;MQ0=0;MQRankSum=-11.037;QD=28.91;ReadPosRankSum=3.311;VQSLOD=4.1397;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:25:66.23:0,66,1740	1/1:2,9:11:27.08:373,27,0	0/0:11,0:8:18.06:0,18,450	0/0:12,0:12:30.10:0,30,727	1/1:4,17:21:44.40:570,44,0	0/0:21,0:21:57.20:0,57,1506	0/0:15,0:15:42.14:0,42,1130	0/1:14,7:21:97.20:327,0,97	1/1:7,11:18:20.81:552,21,0	0/1:13,15:28:72.61:715,0,73	1/1:3,17:19:48.04:635,48,0	1/1:4,5:9:26.92:334,27,0	1/1:6,7:13:32.96:385,33,0	1/1:4,11:15:42.05:548,42,0	1/1:5,14:19:51.02:658,51,0	1/1:7,4:11:1.24:260,1,0	0/1:12,7:19:99:237,0,143	0/1:7,7:14:9.79:284,0,10	0/1:7,7:13:54.06:300,0,54	1/1:5,14:19:54.07:719,54,0	1/1:6,1:6:11.84:97,12,0	1/1:4,15:19:54.01:686,54,0	1/1:6,20:25:68.89:843,69,0	1/1:3,6:9:18.06:255,18,0	0/0:18,0:18:54.16:0,54,1325	1/1:5,17:22:16.32:758,16,0	1/1:7,16:23:22.56:711,23,0	1/1:0,7:7:21.07:305,21,0
chr10	12628199	.	GAAATT	G	13266.86	PASS	AB=0.650;AC=43;AF=0.768;AN=56;BaseQRankSum=13.213;DP=448;FS=6.801;HRun=0;HaplotypeScore=159.2139;InbreedingCoeff=0.8843;MQ=39.76;MQ0=2;MQRankSum=-11.344;QD=38.12;ReadPosRankSum=1.675;VQSLOD=4.6775;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:25:62.51:0,63,1747	1/1:1,9:10:27.09:438,27,0	0/0:13,0:8:18.06:0,18,514	0/0:10,0:9:24.07:0,24,586	1/1:2,17:19:45.05:687,45,0	0/0:20,0:20:60.19:0,60,1766	0/0:15,0:15:42.14:0,42,1308	1/1:7,14:21:42.14:673,42,0	1/1:8,11:19:48.16:797,48,0	1/1:9,17:26:45.15:794,45,0	1/1:1,19:19:51.17:798,51,0	1/1:5,5:10:24.08:393,24,0	1/1:2,7:9:21.07:350,21,0	1/1:3,11:14:36.12:591,36,0	1/1:5,14:19:51.17:812,51,0	1/1:5,4:9:24.08:387,24,0	0/1:5,7:13:99:293,0,123	1/1:6,7:13:27.09:435,27,0	1/1:7,7:13:24.08:404,24,0	1/1:6,14:20:57.19:912,57,0	1/1:6,1:7:9.03:124,9,0	1/1:3,15:18:48.16:775,48,0	1/1:5,20:24:60.19:939,60,0	1/1:3,6:9:24.08:371,24,0	0/0:16,0:16:48.15:0,48,1396	1/1:7,17:24:63.21:1050,63,0	1/1:5,15:21:51.65:850,52,0	1/1:1,7:8:24.08:395,24,0
chr10	12628202	.	AT	A	3655.22	PASS	AB=1.000;AC=43;AF=0.768;AN=56;BaseQRankSum=12.808;DP=400;FS=8.989;HRun=2;HaplotypeScore=151.1318;InbreedingCoeff=0.8770;MQ=40.66;MQ0=2;MQRankSum=-10.746;QD=12.14;ReadPosRankSum=1.814;VQSLOD=1.8550;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:24:34.39:0,34,800	1/1:10,0:10:22.97:113,23,0	0/0:12,0:7:18.05:0,18,252	0/0:10,0:8:18.05:0,18,242	1/1:17,2:19:35.62:214,36,0	0/0:20,0:20:57.19:0,57,853	0/0:16,0:16:45.14:0,45,655	1/1:14,0:14:38.51:310,39,0	1/1:12,5:17:35.59:197,36,0	1/1:17,0:17:37.68:140,38,0	1/1:19,0:18:43.55:201,44,0	1/1:7,2:9:21.33:149,21,0	1/1:8,0:8:20.46:89,20,0	1/1:11,3:14:30.97:166,31,0	1/1:14,3:17:43.75:206,44,0	1/1:5,3:8:15.26:90,15,0	0/1:11,0:11:51.19:143,0,51	1/1:7,3:10:23.49:138,23,0	1/1:7,1:8:20.48:102,20,0	1/1:14,5:19:49.89:281,50,0	1/1:1,3:4:8.40:47,8,0	1/1:17,0:17:40.95:205,41,0	1/1:20,1:21:48.84:214,49,0	1/1:6,4:10:20.91:111,21,0	0/0:16,0:16:45.08:0,45,646	1/1:20,3:23:43.87:266,44,0	1/1:18,0:18:42.94:186,43,0	1/1:7,1:8:20.44:85,20,0
chr10	12628411	.	A	ACAAT	20945.10	PASS	AB=1.000;AC=45;AF=0.804;AN=56;BaseQRankSum=-4.668;DP=422;FS=18.129;HRun=0;HaplotypeScore=77.4057;InbreedingCoeff=0.8694;MQ=69.02;MQ0=0;MQRankSum=-7.151;QD=61.42;ReadPosRankSum=4.484;VQSLOD=5.2688;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:21:27.34:0,27,885	1/1:1,8:10:24.08:646,24,0	0/0:24,0:20:57.01:0,57,923	0/1:19,0:17:42.93:43,0,639	1/1:2,25:28:81.19:2054,81,0	0/0:14,0:14:33.10:0,33,594	0/0:6,0:6:15.04:0,15,253	1/1:6,6:13:17.97:309,18,0	1/1:0,13:13:33.11:887,33,0	1/1:0,20:20:60.19:1509,60,0	1/1:5,16:21:60.10:1413,60,0	1/1:1,8:9:27.09:720,27,0	1/1:0,14:14:39.13:1049,39,0	1/1:0,6:7:12.04:323,12,0	1/1:1,12:13:36.12:968,36,0	1/1:0,5:5:15.05:404,15,0	1/1:0,11:13:30.02:701,30,0	1/1:1,13:13:33.11:889,33,0	1/1:2,12:14:39.13:1051,39,0	1/1:2,21:24:66.23:1750,66,0	1/1:1,11:11:21.07:565,21,0	1/1:4,15:19:48.16:1218,48,0	1/1:2,17:19:51.18:1362,51,0	1/1:4,6:10:24.08:553,24,0	0/0:15,0:15:45.14:0,45,815	1/1:2,16:17:42.14:1093,42,0	1/1:0,14:16:30.02:807,30,0	1/1:0,7:8:24.08:630,24,0
chr10	12628466	.	C	CA	1771.90	PASS	AB=0.881;AC=40;AF=0.714;AN=56;BaseQRankSum=2.806;DP=405;FS=2.161;HRun=15;HaplotypeScore=107.3191;InbreedingCoeff=-0.2250;MQ=43.96;MQ0=6;MQRankSum=-1.349;QD=4.38;ReadPosRankSum=-2.197;VQSLOD=1.4403;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:14,4:18:15.93:16,0,133	0/1:8,3:11:3.01:80,0,3	0/1:16,0:4:2.17:2,0,12	0/1:15,0:5:0:0,0,0	0/1:13,3:17:20.73:50,0,21	1/1:6,0:15:11.45:59,11,0	1/1:6,3:9:12.43:69,12,0	0/1:19,0:18:7.04:7,0,98	1/1:9,5:14:23.81:188,24,0	1/1:10,4:12:11.82:88,12,0	0/1:17,5:21:16.26:84,0,16	1/1:3,2:6:11.78:81,12,0	0/1:11,0:10:6.10:51,0,6	1/1:13,1:13:14.75:109,15,0	1/1:8,1:9:3.88:27,4,0	1/1:6,0:6:11.64:71,12,0	1/1:11,1:13:14.85:131,15,0	1/1:10,4:13:17.98:150,18,0	0/1:12,2:14:46.18:46,0,66	0/1:19,3:24:44.85:57,0,45	0/1:7,2:8:15.10:15,0,15	0/1:9,3:12:15.48:39,0,15	0/1:15,3:18:7.65:36,0,8	1/1:3,1:4:5.98:47,6,0	0/1:11,2:13:7.59:8,0,72	1/1:13,12:23:20.55:251,21,0	0/1:19,3:21:2.49:93,0,2	0/1:12,1:13:6.13:65,0,6
chr10	12630724	.	TAC	T	276.41	PASS	AB=0.915;AC=18;AF=0.333;AN=54;BaseQRankSum=3.864;DP=407;FS=3.907;HRun=0;HaplotypeScore=77.9336;InbreedingCoeff=0.2054;MQ=74.53;MQ0=18;MQRankSum=-0.145;QD=1.66;ReadPosRankSum=1.366;VQSLOD=0.9481;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:27.07:0,27,368	0/0:2,0:1:2.50:0,2,9	0/0:33,0:25:1.25:0,1,3	./.	0/0:14,0:13:12.09:0,12,44	1/1:10,0:15:11.70:94,12,0	1/1:15,3:17:3.01:33,3,0	0/1:6,0:9:0:0,0,0	0/0:16,1:16:25.44:0,25,159	0/1:14,0:13:9.26:18,0,9	0/0:9,0:9:16:0,16,100	0/1:3,1:4:9.52:24,0,10	0/0:5,0:5:5.97:0,6,51	0/0:9,0:11:10.08:0,10,36	0/0:8,1:8:9.92:0,10,43	0/1:10,0:9:7.70:8,0,59	0/1:22,2:24:34.21:34,0,144	0/0:18,1:19:1.09:0,1,171	1/1:3,0:6:3.01:32,3,0	1/1:8,4:11:12.03:128,12,0	1/1:15,3:15:3.01:32,3,0	0/0:15,0:15:15.73:0,16,79	0/0:18,0:17:19.50:0,19,167	0/0:28,2:30:1.71:0,2,180	0/1:12,1:13:9.42:9,0,274	0/1:10,1:11:9.25:9,0,121	0/1:11,0:10:8.78:9,0,128	0/0:12,0:11:10.70:0,11,61
chr10	12630831	.	TA	T	3432.51	PASS	AB=0.808;AC=45;AF=0.804;AN=56;BaseQRankSum=4.939;DP=318;FS=0.000;HRun=11;HaplotypeScore=50.9397;InbreedingCoeff=0.6085;MQ=73.30;MQ0=1;MQRankSum=-3.219;QD=14.67;ReadPosRankSum=1.697;VQSLOD=3.8637;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:41:99:0,111,1148	1/1:2,2:4:5.99:49,6,0	0/1:20,1:17:3.65:4,0,161	0/1:17,1:17:13.84:14,0,159	1/1:1,7:8:17.97:148,18,0	0/0:18,1:19:32.48:0,32,538	0/0:12,0:12:24.02:0,24,243	1/1:3,2:5:11.96:95,12,0	1/1:2,6:8:14.98:123,15,0	1/1:1,6:7:17.98:148,18,0	1/1:1,1:2:3:25,3,0	1/1:3,6:9:14.97:123,15,0	1/1:0,4:4:11.99:98,12,0	0/1:1,11:12:4.67:170,0,5	1/1:2,7:9:17.98:148,18,0	1/1:0,9:9:23.97:197,24,0	1/1:0,19:19:53.94:443,54,0	1/1:0,7:7:17.98:148,18,0	1/1:5,15:19:15.15:318,15,0	1/1:2,4:6:14.98:123,15,0	1/1:5,7:12:11.97:99,12,0	1/1:1,6:7:11.98:99,12,0	1/1:0,2:2:5.99:49,6,0	1/1:0,13:13:38.96:320,39,0	0/0:11,1:12:11.42:0,11,313	1/1:2,12:14:23.95:197,24,0	1/1:2,10:12:26.97:222,27,0	1/1:0,6:6:8.99:74,9,0
chr10	12631034	.	C	CT	785.05	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-7.508;DP=325;FS=39.946;HRun=7;HaplotypeScore=81.7688;InbreedingCoeff=0.8504;MQ=73.03;MQ0=0;MQRankSum=3.522;QD=28.04;ReadPosRankSum=0.383;VQSLOD=1.1338;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:96.09:0,96,911	0/0:6,0:6:18.03:0,18,174	0/0:14,0:14:33.03:0,33,311	0/0:19,0:19:43.03:0,43,507	0/0:9,0:9:24.02:0,24,232	1/1:0,13:13:33.10:399,33,0	1/1:1,14:15:42.13:507,42,0	0/0:16,0:15:36.04:0,36,343	0/0:11,0:11:33.05:0,33,318	0/0:10,0:10:24:0,24,223	0/0:17,0:17:51.08:0,51,492	0/0:6,0:6:18.03:0,18,174	0/0:7,0:7:18.03:0,18,174	0/0:11,0:11:30.04:0,30,290	0/0:5,0:5:15.02:0,15,145	0/0:10,0:10:21.02:0,21,203	0/0:10,0:10:27.01:0,27,253	0/0:6,0:6:12.01:0,12,116	0/0:22,0:22:54.54:0,55,515	0/0:7,0:7:21.03:0,21,203	0/0:5,0:5:12.02:0,12,116	0/0:6,0:6:15.02:0,15,145	0/0:14,0:14:42.07:0,42,405	0/0:3,0:3:9.01:0,9,87	0/0:9,0:9:24.03:0,24,232	0/0:14,0:14:42.07:0,42,405	0/0:14,0:14:42.02:0,42,396	0/0:10,0:10:4.40:0,4,209
chr10	12633504	.	T	TA	11431.45	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-15.279;DP=606;FS=6.703;HRun=6;HaplotypeScore=52.9791;InbreedingCoeff=0.9994;MQ=85.09;MQ0=0;MQRankSum=-2.408;QD=31.67;ReadPosRankSum=3.803;VQSLOD=5.2587;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,105,1055	1/1:0,11:11:33.11:415,33,0	0/0:21,0:21:44.49:0,44,432	0/0:21,0:21:47.98:0,48,462	1/1:0,20:20:60.19:755,60,0	0/0:18,0:18:48.09:0,48,483	0/0:19,0:19:57.13:0,57,581	0/0:32,0:32:90.20:0,90,914	1/1:0,18:18:42.13:528,42,0	1/1:2,28:30:87.28:1091,87,0	1/1:1,26:27:69.18:850,69,0	1/1:3,13:16:30.10:377,30,0	1/1:2,17:19:51.16:640,51,0	1/1:2,10:12:24.08:302,24,0	1/1:2,12:14:33.11:415,33,0	1/1:0,14:14:39.12:491,39,0	1/1:4,18:22:48.15:604,48,0	1/1:1,12:13:30.10:377,30,0	0/0:24,0:24:54.10:0,54,546	0/0:32,0:32:93.17:0,93,934	0/0:20,0:20:57.13:0,57,582	1/1:0,24:24:69.22:868,69,0	1/1:3,24:27:63.20:793,63,0	1/1:3,27:30:75.24:943,75,0	0/0:22,0:22:63.14:0,63,643	1/1:1,17:18:51.16:641,51,0	1/1:6,23:29:63.17:776,63,0	1/1:1,16:17:45.14:566,45,0
chr10	12638754	.	A	AAGGC	10961.66	PASS	AB=0.577;AC=45;AF=0.900;AN=50;BaseQRankSum=-3.770;DP=433;FS=0.000;HRun=0;HaplotypeScore=46.5342;InbreedingCoeff=0.5998;MQ=29.51;MQ0=117;MQRankSum=-2.977;QD=30.45;ReadPosRankSum=0.747;VQSLOD=4.4915;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:23:44.89:0,45,779	1/1:1,6:6:15.05:395,15,0	./.	./.	1/1:5,10:11:9.03:227,9,0	1/1:2,15:15:9.03:220,9,0	1/1:1,11:10:21.07:552,21,0	1/1:8,6:9:21.03:474,21,0	1/1:2,20:18:27.09:671,27,0	1/1:5,15:16:43.24:933,43,0	1/1:2,6:6:3.01:79,3,0	1/1:2,13:13:12.04:315,12,0	1/1:3,8:10:15.05:346,15,0	1/1:4,11:12:15.05:387,15,0	1/1:4,12:12:15.05:386,15,0	1/1:1,12:9:18.06:474,18,0	0/1:4,10:10:22.63:149,0,23	1/1:4,14:12:9.03:237,9,0	1/1:1,13:12:36.05:780,36,0	1/1:2,21:20:36.12:942,36,0	1/1:3,6:9:9.03:228,9,0	1/1:5,16:17:30.10:734,30,0	1/1:6,12:11:26.69:691,27,0	1/1:1,12:10:12.04:316,12,0	0/0:7,0:6:11.99:0,12,152	1/1:3,12:9:27.08:643,27,0	1/1:1,20:20:30.57:782,31,0	./.
chr10	12640257	.	GT	G	931.22	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=3.885;DP=406;FS=1.642;HRun=2;HaplotypeScore=43.8529;InbreedingCoeff=0.9312;MQ=72.76;MQ0=0;MQRankSum=-0.455;QD=32.11;ReadPosRankSum=0.137;VQSLOD=3.1022;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:57.15:0,57,828	0/0:2,0:2:6.02:0,6,90	0/0:11,0:10:21.07:0,21,315	0/0:11,0:11:28.32:0,28,383	0/0:17,0:17:51.17:0,51,755	1/1:0,21:21:60.20:779,60,0	1/1:0,8:8:21.07:273,21,0	0/0:18,0:18:54.16:0,54,757	0/0:17,0:17:51.17:0,51,765	0/0:18,0:18:54.18:0,54,803	0/0:13,0:13:39.13:0,39,585	0/0:7,0:7:21.07:0,21,315	0/0:7,0:7:21.07:0,21,314	0/0:10,0:10:30.10:0,30,450	0/0:14,0:14:42.14:0,42,629	0/0:8,0:8:24.08:0,24,360	0/0:16,0:16:48.15:0,48,698	0/0:6,0:6:18.06:0,18,268	0/0:17,0:17:51.17:0,51,765	0/0:33,0:33:99:0,99,1466	0/0:13,0:13:39.13:0,39,585	0/0:9,0:9:27.09:0,27,404	0/0:17,0:17:51.16:0,51,746	0/0:7,0:7:18.06:0,18,270	0/0:15,0:15:45.15:0,45,675	0/0:16,0:16:48.15:0,48,702	0/0:26,0:26:75.24:0,75,1105	0/0:28,0:28:84.27:0,84,1240
chr10	12644576	.	TAGAA	T	1992.01	PASS	AC=18;AF=0.750;AN=24;BaseQRankSum=2.987;DP=212;FS=0.000;HRun=0;HaplotypeScore=23.0693;InbreedingCoeff=0.6953;MQ=19.91;MQ0=122;MQRankSum=-1.566;QD=19.92;ReadPosRankSum=-0.544;VQSLOD=2.8118;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	1/1:0,1:1:3.01:57,3,0	./.	./.	1/1:0,14:11:12.04:227,12,0	0/0:8,0:3:9.03:0,9,234	./.	./.	./.	1/1:3,16:11:30.09:536,30,0	1/1:0,18:11:18.06:341,18,0	./.	./.	./.	./.	1/1:2,5:2:3.01:57,3,0	./.	./.	./.	0/0:12,0:9:21.07:0,21,557	./.	1/1:1,5:3:3.01:57,3,0	1/1:0,12:10:14.88:204,15,0	./.	0/0:5,0:4:6.02:0,6,161	1/1:0,6:4:12.04:228,12,0	1/1:2,15:9:21.07:398,21,0	./.
chr10	12645978	.	CT	C	739.18	PASS	AB=0.971;AC=6;AF=0.107;AN=56;BaseQRankSum=5.224;DP=530;FS=0.695;HRun=3;HaplotypeScore=79.2972;InbreedingCoeff=0.6439;MQ=79.84;MQ0=3;MQRankSum=-1.044;QD=7.62;ReadPosRankSum=-1.058;VQSLOD=0.3123;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,114,1617	0/0:9,0:9:21.07:0,21,301	0/1:30,1:21:11.69:12,0,288	0/1:29,1:21:6.88:7,0,409	0/0:17,0:17:42.10:0,42,581	1/1:0,11:11:24.08:297,24,0	1/1:1,18:19:45.14:555,45,0	0/0:13,0:13:39.12:0,39,545	0/0:18,0:18:42.14:0,42,604	0/0:28,0:28:81.27:0,81,1167	0/0:17,0:17:45.15:0,45,647	0/0:23,0:23:63.20:0,63,891	0/0:15,0:15:36.12:0,36,517	0/0:22,0:22:47.99:0,48,691	0/0:18,0:18:42.13:0,42,585	0/0:5,0:5:15.05:0,15,216	0/0:20,0:20:48.13:0,48,655	0/0:7,0:7:12.04:0,12,173	0/0:23,0:23:63.15:0,63,866	0/0:16,0:16:45.14:0,45,629	0/0:23,0:23:66.18:0,66,923	0/0:20,0:20:51.16:0,51,716	0/0:17,0:17:48.11:0,48,665	0/0:18,0:18:48.15:0,48,674	0/0:13,0:13:36.11:0,36,501	0/0:19,0:19:54.16:0,54,728	0/0:18,0:18:54.15:0,54,740	0/0:15,0:15:33.11:0,33,473
chr10	12646528	.	TA	T	330.70	PASS	AC=2;AF=0.077;AN=26;BaseQRankSum=5.027;DP=628;FS=13.423;HRun=6;HaplotypeScore=37.6990;InbreedingCoeff=0.6291;MQ=13.11;MQ0=435;MQRankSum=-0.073;QD=17.41;ReadPosRankSum=1.665;VQSLOD=1.8761;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	0/0:9,0:6:18.06:0,18,231	./.	./.	0/0:23,0:17:33.11:0,33,420	0/0:30,0:4:6.02:0,6,79	./.	./.	0/0:23,0:1:3.01:0,3,36	0/0:30,0:11:33.11:0,33,434	0/0:25,0:17:42.14:0,42,543	./.	./.	./.	./.	./.	./.	./.	./.	1/1:3,16:14:39.10:418,39,0	./.	0/0:22,0:10:27.05:0,27,335	0/0:16,0:9:24.08:0,24,312	./.	0/0:29,0:20:45.06:0,45,552	0/0:26,0:4:9.03:0,9,118	0/0:24,0:4:6.02:0,6,79	0/0:17,0:3:9.03:0,9,118
chr10	12647849	.	T	TA	1464.05	PASS	AB=0.751;AC=35;AF=0.648;AN=54;BaseQRankSum=-1.396;DP=272;FS=4.737;HRun=11;HaplotypeScore=26.3448;InbreedingCoeff=0.3163;MQ=55.39;MQ0=14;MQRankSum=-1.916;QD=7.96;ReadPosRankSum=0.462;VQSLOD=0.6255;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:56.72:0,57,440	1/1:2,2:4:3.01:30,3,0	0/0:13,0:3:2.93:0,3,23	0/1:14,1:7:17.23:21,0,17	1/1:4,10:12:14.98:141,15,0	1/1:1,0:8:6.15:29,6,0	1/1:0,0:4:2.84:14,3,0	./.	1/1:2,7:6:9.02:91,9,0	0/1:7,2:7:8.48:8,0,17	1/1:4,12:13:18:172,18,0	1/1:2,5:7:11.85:101,12,0	1/1:2,2:2:3.01:30,3,0	1/1:2,2:3:3.01:30,3,0	0/0:3,0:2:2.97:0,3,23	1/1:2,7:7:11.98:111,12,0	0/1:5,15:19:15.77:386,0,16	1/1:1,0:1:3.01:30,3,0	0/0:3,0:2:4.07:0,4,12	0/0:4,0:9:18.13:0,18,66	0/0:0,0:4:6.11:0,6,18	1/1:4,5:7:6.01:61,6,0	1/1:1,10:7:15.03:152,15,0	1/1:0,2:2:6.01:61,6,0	0/0:14,0:14:26.88:0,27,209	0/1:12,3:10:17.23:25,0,17	0/1:5,6:9:8.21:107,0,8	1/1:3,3:5:3.01:30,3,0
chr10	12648164	.	TA	T	1574.07	PASS	AC=36;AF=0.857;AN=42;BaseQRankSum=2.105;DP=352;FS=0.000;HRun=8;HaplotypeScore=36.4350;InbreedingCoeff=0.5043;MQ=31.03;MQ0=22;MQRankSum=-2.932;QD=5.99;ReadPosRankSum=4.436;VQSLOD=-0.6151;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,1:25:5.14:0,5,382	1/1:1,3:3:3:29,3,0	./.	./.	1/1:4,25:23:15.02:144,15,0	./.	./.	./.	1/1:1,10:6:3:29,3,0	1/1:0,17:14:33.05:319,33,0	1/1:3,21:16:24.04:232,24,0	1/1:1,8:7:15.02:145,15,0	1/1:3,12:7:6.01:58,6,0	1/1:1,6:3:3:29,3,0	1/1:2,16:10:9.01:87,9,0	1/1:1,8:4:3:29,3,0	1/1:10,10:3:3:29,3,0	1/1:3,9:6:3:29,3,0	./.	0/0:21,0:20:38.93:0,39,335	./.	1/1:3,11:5:3:29,3,0	1/1:2,13:11:12.02:116,12,0	1/1:2,14:8:3:29,3,0	0/0:17,0:16:39.10:0,39,458	1/1:2,12:7:18.01:168,18,0	1/1:3,13:7:12.02:116,12,0	1/1:3,10:9:9.01:87,9,0
chr10	12648209	.	C	CA	685.92	PASS	AC=6;AF=0.150;AN=40;BaseQRankSum=2.646;DP=514;FS=3.707;HRun=4;HaplotypeScore=39.5956;InbreedingCoeff=0.5381;MQ=31.93;MQ0=59;MQRankSum=-4.265;QD=26.38;ReadPosRankSum=2.313;VQSLOD=2.2853;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:35:75.16:0,75,849	0/0:7,0:6:6.02:0,6,68	./.	./.	0/0:34,0:23:12.03:0,12,136	1/1:1,2:1:3.01:41,3,0	1/1:0,1:1:3.01:41,3,0	./.	./.	0/0:29,0:21:54.15:0,54,611	0/0:29,0:21:9.03:0,9,102	0/0:15,0:10:6.01:0,6,68	0/0:19,0:13:5.84:0,6,67	0/0:10,0:6:3.01:0,3,34	0/0:24,0:14:6.02:0,6,68	0/0:12,0:8:3.01:0,3,34	./.	0/0:11,0:8:9.03:0,9,102	./.	1/1:1,21:21:54.14:716,54,0	./.	0/0:20,0:14:9.03:0,9,102	0/0:24,0:17:6.02:0,6,68	./.	0/0:15,0:15:42.12:0,42,476	0/0:27,0:22:57.16:0,57,646	0/0:21,0:10:12.03:0,12,136	0/0:13,0:11:18.05:0,18,204
chr10	12649007	.	C	CA	1473.40	PASS	AB=0.667;AC=20;AF=0.526;AN=38;BaseQRankSum=-1.417;DP=328;FS=0.000;HRun=6;HaplotypeScore=21.4311;InbreedingCoeff=0.4807;MQ=22.26;MQ0=70;MQRankSum=-1.617;QD=11.16;ReadPosRankSum=2.126;VQSLOD=-0.1070;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:14:3:0,3,31	1/1:2,4:5:12.04:151,12,0	./.	./.	0/1:10,10:14:33.99:237,0,34	0/0:16,0:12:8.97:0,9,81	0/0:9,0:3:3.01:0,3,31	0/0:19,0:1:3.01:0,3,31	./.	0/1:8,8:11:39.94:165,0,40	1/1:11,12:18:30.10:377,30,0	./.	./.	1/1:3,2:1:3.01:38,3,0	./.	1/1:2,1:2:3.01:38,3,0	./.	./.	0/0:14,0:4:12.03:0,12,122	0/0:31,0:10:12.03:0,12,122	0/0:19,0:6:5.98:0,6,51	1/1:7,2:5:5.98:58,6,0	1/1:4,8:10:24.07:292,24,0	./.	0/0:21,0:14:27.06:0,27,274	1/1:11,6:7:9.03:113,9,0	1/1:3,7:6:9.03:113,9,0	1/1:9,2:4:3.01:38,3,0
chr10	12650659	.	G	GC	293.08	PASS	AC=10;AF=0.833;AN=12;BaseQRankSum=0.751;DP=568;FS=3.522;HRun=0;HaplotypeScore=7.0895;MQ=6.79;MQ0=423;MQRankSum=-0.751;QD=7.33;ReadPosRankSum=0.751;VQSLOD=2.8686;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:7:3.01:0,3,36	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	1/1:2,8:2:3.01:48,3,0	1/1:1,6:1:3.01:48,3,0	./.	1/1:1,6:2:6.02:95,6,0	1/1:2,5:1:3.01:48,3,0	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	1/1:5,4:4:9.03:131,9,0	./.
chr10	12652337	.	CA	C	971.66	PASS	AB=0.690;AC=32;AF=0.571;AN=56;BaseQRankSum=2.784;DP=387;FS=2.684;HRun=15;HaplotypeScore=41.7639;InbreedingCoeff=0.5125;MQ=59.37;MQ0=23;MQRankSum=0.317;QD=4.07;ReadPosRankSum=3.497;VQSLOD=-0.1543;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,1:25:18.75:0,19,258	1/1:3,2:4:5.88:37,6,0	0/0:28,0:9:4.88:0,5,21	0/0:20,0:7:5.21:0,5,32	1/1:2,9:10:11.77:77,12,0	1/1:4,0:15:7.93:23,8,0	1/1:1,0:8:12.21:35,12,0	0/0:18,1:17:7.54:0,8,172	0/0:10,0:10:11.98:0,12,99	1/1:6,7:13:22.63:140,23,0	1/1:10,9:19:7.67:56,8,0	0/0:2,0:1:0:0,0,0	1/1:5,2:5:2.74:19,3,0	1/1:5,5:10:5.80:38,6,0	0/1:3,2:5:17.48:30,0,17	0/1:4,4:8:12.03:62,0,12	1/1:17,2:16:12.77:68,13,0	1/1:7,2:6:4.99:25,5,0	0/0:14,0:12:20.99:0,21,181	0/0:8,1:10:14.84:0,15,120	0/0:9,0:9:17.90:0,18,139	0/1:8,5:12:26.54:27,0,41	0/1:9,9:19:3.71:98,0,4	1/1:9,11:20:28.61:178,29,0	0/0:9,0:7:5.98:0,6,48	1/1:17,3:17:8.20:48,8,0	1/1:13,9:20:23.49:154,23,0	1/1:6,2:6:7.94:44,8,0
chr10	12653612	.	AG	A	588.53	PASS	AC=4;AF=0.077;AN=52;BaseQRankSum=5.122;DP=561;FS=1.964;HRun=3;HaplotypeScore=53.5031;InbreedingCoeff=0.8765;MQ=39.74;MQ0=38;MQRankSum=-2.352;QD=12.79;ReadPosRankSum=-0.436;VQSLOD=2.0259;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:59,0:54:74.92:0,75,1078	0/0:7,0:6:15.05:0,15,215	./.	0/0:24,0:1:3.01:0,3,43	0/0:24,0:15:36.12:0,36,518	1/1:1,25:18:42.13:520,42,0	1/1:2,18:11:15.05:186,15,0	./.	0/0:19,0:13:17.96:0,18,258	0/0:17,0:11:30.08:0,30,412	0/0:21,0:16:39.09:0,39,537	0/0:17,0:16:39.13:0,39,560	0/0:18,0:17:30.08:0,30,431	0/0:12,0:9:14.83:0,15,215	0/0:12,0:10:15.05:0,15,216	0/0:13,0:12:30.10:0,30,429	0/0:28,0:24:38.63:0,39,560	0/0:24,0:23:30.10:0,30,432	0/0:27,0:16:48.16:0,48,690	0/0:12,0:9:27.09:0,27,387	0/0:29,0:25:48.16:0,48,690	0/0:16,0:13:30.01:0,30,431	0/0:16,0:12:36.12:0,36,518	0/0:25,0:22:24.04:0,24,322	0/0:18,0:15:33.11:0,33,470	0/0:13,0:11:27.09:0,27,389	0/0:19,0:17:48.12:0,48,667	0/0:12,0:9:18.06:0,18,253
chr10	12653815	.	AG	A	3086.52	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=2.224;DP=249;FS=25.879;HRun=7;HaplotypeScore=39.8876;InbreedingCoeff=0.9037;MQ=65.84;MQ0=1;MQRankSum=-2.218;QD=21.89;ReadPosRankSum=3.511;VQSLOD=1.8933;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:20:47.21:0,47,620	1/1:0,2:2:6.01:61,6,0	0/0:7,0:6:15.05:0,15,182	0/0:12,0:6:5.71:0,6,69	1/1:0,11:11:21.05:213,21,0	0/0:12,0:12:27.09:0,27,335	0/0:6,0:6:12.04:0,12,151	0/0:20,0:19:42.10:0,42,511	1/1:1,4:5:9.02:92,9,0	1/1:0,6:6:18.04:184,18,0	1/1:0,5:5:9.02:92,9,0	1/1:0,9:9:21.05:214,21,0	1/1:1,3:4:9.02:92,9,0	1/1:0,6:6:15.03:153,15,0	1/1:0,7:7:15.03:152,15,0	1/1:0,7:7:18.04:184,18,0	1/1:3,13:16:36.07:366,36,0	1/1:0,8:8:18.04:184,18,0	0/0:6,0:6:15.05:0,15,187	0/0:4,0:4:9.02:0,9,100	0/0:14,0:14:36.10:0,36,439	1/1:0,12:11:24.05:245,24,0	1/1:1,12:13:27.06:275,27,0	1/1:0,4:4:12.03:122,12,0	0/0:7,0:7:18.06:0,18,226	1/1:1,10:11:30.07:306,30,0	1/1:0,10:10:24.05:245,24,0	1/1:0,5:5:12.03:122,12,0
chr10	12653999	.	AT	A	2507.67	PASS	AC=46;AF=0.885;AN=52;BaseQRankSum=8.182;DP=207;FS=1.601;HRun=9;HaplotypeScore=50.6010;InbreedingCoeff=0.5196;MQ=64.07;MQ0=4;MQRankSum=-4.620;QD=15.02;ReadPosRankSum=1.373;VQSLOD=3.5889;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:52.40:0,52,591	1/1:1,1:2:2.99:27,3,0	./.	0/0:4,0:4:1.82:0,2,5	1/1:1,4:5:11.97:110,12,0	1/1:0,0:15:28.52:85,29,0	1/1:0,0:1:2.99:24,3,0	1/1:8,0:19:28.70:95,29,0	1/1:1,2:3:2.97:27,3,0	1/1:2,5:6:15.01:137,15,0	1/1:0,6:7:18.01:164,18,0	1/1:0,3:3:9:82,9,0	1/1:0,2:3:6:55,6,0	1/1:1,1:2:2.99:27,3,0	1/1:0,4:4:12.01:110,12,0	1/1:0,3:3:9:82,9,0	1/1:2,18:20:50.98:466,51,0	1/1:1,12:13:36.02:329,36,0	1/1:4,0:12:14.19:43,14,0	1/1:1,0:8:11.13:47,11,0	1/1:0,0:1:2.99:23,3,0	./.	1/1:0,1:4:3:27,3,0	1/1:0,1:1:3:27,3,0	0/0:14,0:14:39.11:0,39,440	1/1:1,10:12:32.96:292,33,0	1/1:2,7:9:21.01:192,21,0	1/1:1,6:9:18.01:165,18,0
chr10	12654699	.	TGAGAAA	T	1653.88	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.774;DP=612;FS=7.730;HRun=0;HaplotypeScore=118.2182;InbreedingCoeff=0.9794;MQ=61.39;MQ0=21;MQRankSum=-8.539;QD=48.64;ReadPosRankSum=-0.935;VQSLOD=3.0905;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,117,4052	0/0:10,0:10:30.10:0,30,1069	0/0:29,0:14:35.88:0,36,932	0/0:19,0:9:18.06:0,18,609	0/0:30,0:30:87.30:0,87,3061	1/1:1,13:14:36.12:851,36,0	1/1:2,18:20:45.07:925,45,0	0/0:16,0:16:48.16:0,48,1634	0/0:21,0:21:63.22:0,63,2038	0/0:32,0:32:93.32:0,93,3258	0/0:25,0:25:72.25:0,72,2560	0/0:10,0:10:30.10:0,30,1055	0/0:20,0:20:57.20:0,57,1966	0/0:22,0:22:60.21:0,60,2012	0/0:13,0:13:39.13:0,39,1391	0/0:10,0:10:30.10:0,30,995	0/0:28,0:28:81.28:0,81,2750	0/0:18,0:17:48.16:0,48,1572	0/0:28,0:24:72.25:0,72,2462	0/0:28,0:28:84.29:0,84,2851	0/0:31,0:31:90.31:0,90,3091	0/0:27,0:27:78.27:0,78,2644	0/0:16,0:16:45.63:0,46,1600	0/0:33,0:33:99:0,99,3294	0/0:17,0:17:51.18:0,51,1796	0/0:16,0:16:48.16:0,48,1699	0/0:34,0:34:90.31:0,90,3152	0/0:4,0:4:12.04:0,12,428
chr10	12655137	.	AT	A	3802.02	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=9.741;DP=567;FS=5.321;HRun=1;HaplotypeScore=55.7034;InbreedingCoeff=0.9939;MQ=86.08;MQ0=0;MQRankSum=-0.072;QD=38.80;ReadPosRankSum=-0.686;VQSLOD=3.8066;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,105,1642	0/0:7,0:7:21.07:0,21,334	0/0:18,0:18:51.10:0,51,694	0/0:21,0:21:54.25:0,54,759	0/0:25,0:25:75.26:0,75,1198	0/0:20,0:20:57.18:0,57,887	0/0:26,0:26:78.23:0,78,1191	1/1:0,20:20:60.20:839,60,0	0/0:23,0:23:69.22:0,69,1078	0/0:18,0:18:54.18:0,54,839	0/0:20,0:20:60.20:0,60,956	0/0:16,0:16:48.14:0,48,741	0/0:20,0:20:60.19:0,60,935	0/0:8,0:8:24.06:0,24,359	0/0:20,0:20:60.19:0,60,936	0/0:22,0:22:66.19:0,66,1008	0/0:19,0:19:57.19:0,57,910	0/0:16,0:16:48.16:0,48,767	1/1:0,18:18:54.12:699,54,0	1/1:0,28:28:78.26:1090,78,0	1/1:0,32:31:84.28:1173,84,0	0/0:25,0:25:72.25:0,72,1150	0/0:19,0:19:57.19:0,57,890	0/0:19,0:19:57.19:0,57,910	0/0:13,0:13:39.13:0,39,623	0/0:19,0:19:57.19:0,57,910	0/0:34,0:34:99:0,102,1595	0/0:5,0:5:15.03:0,15,216
chr10	12656409	.	T	TACACAC	4825.64	PASS	AB=0.936;AC=39;AF=0.722;AN=54;BaseQRankSum=-1.275;DP=395;FS=3.321;HRun=0;HaplotypeScore=85.8542;InbreedingCoeff=0.4648;MQ=61.76;MQ0=24;MQRankSum=1.616;QD=17.23;ReadPosRankSum=-0.970;VQSLOD=3.8890;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:20.97:0,21,414	./.	0/0:36,0:24:9.16:0,9,57	0/0:32,0:12:3.01:0,3,44	0/1:14,0:14:4.93:86,0,5	0/0:14,0:14:9.03:0,9,126	0/0:12,0:12:2.04:0,2,6	1/1:22,0:16:20.97:299,21,0	1/1:12,0:12:9.03:195,9,0	1/1:13,0:11:24.07:466,24,0	0/1:15,0:14:5.53:217,0,6	0/1:13,0:12:0.02:0,0,1	1/1:9,0:9:8.96:164,9,0	1/1:8,1:9:15.05:284,15,0	1/1:9,0:9:12.02:177,12,0	1/1:12,0:10:12.04:221,12,0	1/1:13,0:12:21.07:473,21,0	1/1:5,0:5:6.02:118,6,0	1/1:10,2:11:19.88:387,20,0	1/1:20,0:18:3.01:72,3,0	1/1:7,0:6:3.01:41,3,0	1/1:16,0:15:27.09:623,27,0	1/1:14,0:14:0.83:325,1,0	0/1:8,7:14:0:0,0,0	0/1:12,0:12:4.93:5,0,255	1/1:4,5:8:20.71:364,21,0	1/1:11,0:17:12.04:210,12,0	1/1:3,4:7:3.90:100,4,0
chr10	12656413	.	C	CACAC	3740.72	PASS	AB=1.000;AC=40;AF=0.741;AN=54;BaseQRankSum=1.111;DP=397;FS=3.530;HRun=0;HaplotypeScore=78.9460;InbreedingCoeff=0.6063;MQ=59.96;MQ0=26;MQRankSum=0.007;QD=14.33;ReadPosRankSum=-1.155;VQSLOD=3.0696;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:18.57:0,19,299	./.	0/0:35,0:23:9.90:0,10,63	0/0:32,0:12:3.01:0,3,43	1/1:12,0:12:12.51:197,13,0	0/0:21,0:21:9.01:0,9,84	0/0:12,0:12:2.04:0,2,6	1/1:23,0:17:20.96:235,21,0	1/1:12,0:12:11.07:142,11,0	1/1:13,0:11:24.07:356,24,0	1/1:14,0:13:12.04:182,12,0	0/0:7,4:11:0.12:0,0,0	1/1:9,0:9:9:133,9,0	1/1:8,0:8:17.09:247,17,0	1/1:8,0:8:12.02:171,12,0	1/1:12,0:10:12.04:179,12,0	1/1:13,0:12:18.06:266,18,0	1/1:7,0:5:6.02:80,6,0	1/1:12,0:10:20.55:277,21,0	1/1:19,0:17:3.01:48,3,0	1/1:6,0:5:3.01:41,3,0	1/1:16,0:15:27.09:425,27,0	1/1:14,0:14:18.04:262,18,0	0/1:14,0:13:0:0,0,0	0/1:12,0:12:4.93:5,0,192	1/1:10,0:8:20.71:280,21,0	1/1:20,0:17:12:161,12,0	1/1:7,0:7:3.48:54,3,0
chr10	12656423	.	CACACACACACACAG	C	394.55	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=0.885;DP=375;FS=0.000;HRun=0;HaplotypeScore=107.8166;InbreedingCoeff=0.5951;MQ=50.58;MQ0=28;MQRankSum=-1.602;QD=11.27;ReadPosRankSum=0.444;VQSLOD=1.9997;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:21.07:0,21,910	0/0:1,0:1:3.01:0,3,100	0/0:27,0:16:39:0,39,965	0/0:22,0:4:12.04:0,12,476	0/0:13,0:12:18.06:0,18,882	1/1:2,20:23:9.03:367,9,0	1/1:2,10:12:3.01:127,3,0	0/0:22,0:16:46.39:0,46,1271	0/0:10,0:10:18.04:0,18,579	0/0:14,0:12:33.06:0,33,1312	0/0:11,0:10:15.05:0,15,719	0/0:10,0:9:5.49:0,5,116	0/0:9,0:9:20.96:0,21,765	0/0:10,0:10:18.06:0,18,759	0/0:8,0:8:12.04:0,12,620	0/0:10,0:8:18.53:0,19,759	0/0:13,0:12:20.99:0,21,891	0/0:6,0:4:12.04:0,12,456	0/0:12,0:10:29.46:0,29,1134	0/0:19,0:16:9.02:0,9,211	0/0:6,0:5:6.02:0,6,216	0/0:15,0:14:30.10:0,30,1445	0/0:15,0:15:27.02:0,27,1127	0/0:14,0:12:9.50:0,10,273	0/0:12,0:12:24.08:0,24,1127	0/0:12,0:10:30.05:0,30,1040	0/0:21,0:18:14.47:0,14,504	0/0:7,0:7:10.85:0,11,275
chr10	12656435	.	C	CAGAGAGAGAG	1644.02	PASS	AB=0.930;AC=25;AF=0.625;AN=40;BaseQRankSum=-3.109;DP=371;FS=0.000;HRun=0;HaplotypeScore=102.3660;InbreedingCoeff=0.2418;MQ=46.25;MQ0=24;MQRankSum=0.000;QD=9.18;ReadPosRankSum=-1.069;VQSLOD=1.5272;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:0:0,0,0	./.	./.	./.	./.	0/0:23,0:23:8.08:0,8,161	0/0:13,0:12:2.29:0,2,35	1/1:21,0:15:0.89:2,1,0	./.	1/1:12,0:10:3.01:140,3,0	./.	1/1:10,0:9:6.02:188,6,0	1/1:7,0:8:5.38:95,5,0	1/1:10,0:10:3.01:78,3,0	0/1:11,0:11:0.72:160,0,1	1/1:9,0:7:0.47:1,0,0	0/1:11,2:14:9.84:143,0,10	./.	0/1:12,0:10:12.50:106,0,12	0/0:21,0:18:1.63:0,2,14	./.	0/0:19,0:18:0.47:0,0,1	0/0:20,0:20:0.47:0,0,1	1/1:14,1:13:6.02:171,6,0	1/1:14,0:14:3:25,3,0	1/1:13,0:10:13.60:331,14,0	1/1:23,0:20:12.02:269,12,0	1/1:6,0:6:3.01:44,3,0
chr10	12656596	.	A	AACACACACACAC	9516.72	PASS	AB=0.966;AC=43;AF=0.796;AN=54;BaseQRankSum=-0.968;DP=527;FS=0.000;HRun=0;HaplotypeScore=178.4236;InbreedingCoeff=0.5105;MQ=54.75;MQ0=5;MQRankSum=-6.225;QD=25.58;ReadPosRankSum=-4.013;VQSLOD=3.1944;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:28:36.58:37,0,1260	1/1:4,0:4:3.01:118,3,0	0/0:31,0:13:3.01:0,3,78	0/0:35,0:13:3.68:0,4,91	1/1:27,0:27:12.98:459,13,0	0/0:6,0:17:33.11:0,33,907	0/0:6,0:18:21.07:0,21,575	1/1:26,0:24:38.31:1256,38,0	1/1:16,0:16:9.01:148,9,0	1/1:25,0:23:21.03:711,21,0	1/1:15,0:15:2.99:24,3,0	1/1:3,2:8:3.01:175,3,0	1/1:6,2:8:6.02:349,6,0	1/1:7,0:8:3.01:116,3,0	1/1:6,0:6:3.01:175,3,0	1/1:5,3:9:12.04:641,12,0	1/1:15,0:15:9.03:380,9,0	1/1:16,4:21:18.06:953,18,0	1/1:9,0:9:6.02:250,6,0	1/1:26,1:30:12.04:640,12,0	1/1:15,0:15:2.75:47,3,0	./.	1/1:24,2:29:2.75:175,3,0	1/1:14,1:20:6.85:403,7,0	0/0:25,0:27:51.16:0,51,1632	1/1:21,1:23:21.07:1052,21,0	1/1:18,3:21:24.07:995,24,0	1/1:8,0:8:18.01:411,18,0
chr10	12657381	.	T	TAC	55.64	PASS	AB=1.000;AC=5;AF=0.119;AN=42;BaseQRankSum=1.382;DP=383;FS=1.695;HRun=0;HaplotypeScore=57.5546;InbreedingCoeff=0.1287;MQ=75.66;MQ0=13;MQRankSum=-1.300;QD=0.86;ReadPosRankSum=-0.233;VQSLOD=1.4674;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:20,0:20:20.86:21,0,105	0/0:5,0:5:3:0,3,32	./.	./.	0/0:12,0:12:8.86:0,9,78	0/0:14,0:16:8.52:0,9,42	0/0:9,0:12:5.35:0,5,25	./.	0/0:16,0:16:8.77:0,9,56	0/0:14,0:15:2.42:0,2,14	0/1:12,0:11:0:0,0,0	./.	0/0:5,0:5:3.01:0,3,32	./.	0/0:6,0:6:3.01:0,3,32	0/0:11,0:11:9.02:0,9,96	0/0:16,0:16:6.01:0,6,64	0/1:16,0:14:15.12:15,0,71	0/0:16,0:15:2.68:0,3,11	./.	0/0:34,0:33:14.61:0,15,90	0/0:7,0:8:6.01:0,6,63	0/0:7,0:7:3.01:0,3,32	1/1:11,6:17:9.03:117,9,0	./.	0/0:16,0:15:2.98:0,3,22	0/0:17,0:17:14.91:0,15,137	0/0:1,0:1:1.82:0,2,5
chr10	12658695	.	CTG	C	2471.24	PASS	AB=0.873;AC=32;AF=0.593;AN=54;BaseQRankSum=2.224;DP=625;FS=2.458;HRun=0;HaplotypeScore=104.3242;InbreedingCoeff=0.4770;MQ=54.13;MQ0=13;MQRankSum=1.298;QD=6.01;ReadPosRankSum=2.220;VQSLOD=3.0172;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:29,3:32:9.12:9,0,194	1/1:0,1:2:5.85:47,6,0	./.	0/0:48,0:25:0:0,0,0	0/0:6,0:14:20.94:0,21,171	0/1:16,0:25:0.26:0,0,155	0/0:12,0:19:8.98:0,9,74	0/0:19,0:19:20.44:0,20,122	1/1:14,7:31:18.10:269,18,0	0/1:13,2:20:12.21:79,0,12	0/1:6,1:9:36.01:38,0,36	1/1:10,3:16:20.54:164,21,0	1/1:13,11:24:20.89:212,21,0	1/1:12,4:17:17.88:179,18,0	1/1:18,3:25:23.19:182,23,0	1/1:9,11:20:24.06:264,24,0	1/1:15,10:25:27.02:283,27,0	1/1:12,11:23:26.70:258,27,0	0/0:9,0:13:11.67:0,12,87	0/0:6,0:9:2.41:0,2,11	0/1:38,0:52:1.60:2,0,19	1/1:17,3:23:23.66:218,24,0	1/1:9,2:11:20.80:180,21,0	0/0:25,0:37:42.03:0,42,463	0/0:5,0:5:2.99:0,3,24	0/1:16,4:20:29.79:103,0,30	1/1:7,3:12:17.59:133,18,0	1/1:6,8:12:3.01:33,3,0
chr10	12659672	.	TACAC	T	2270.86	PASS	AB=0.782;AC=41;AF=0.854;AN=48;BaseQRankSum=2.223;DP=481;FS=8.720;HRun=0;HaplotypeScore=112.5761;InbreedingCoeff=0.2842;MQ=63.44;MQ0=9;MQRankSum=-2.498;QD=6.40;ReadPosRankSum=0.931;VQSLOD=1.2359;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:31:27.09:0,27,517	1/1:3,4:7:9.03:137,9,0	./.	./.	1/1:9,6:15:6.41:64,6,0	1/1:13,0:20:15.02:140,15,0	1/1:15,0:20:5.37:36,5,0	./.	1/1:21,6:26:18.06:278,18,0	1/1:19,5:24:11.95:165,12,0	1/1:9,2:11:6.01:72,6,0	1/1:5,3:8:9.03:139,9,0	1/1:11,3:14:9.03:140,9,0	1/1:7,0:10:9.01:83,9,0	0/1:11,1:15:29.21:29,0,114	1/1:8,2:10:6.02:93,6,0	0/1:17,8:23:10.88:126,0,11	0/1:12,4:16:6.29:84,0,6	1/1:14,0:15:6.01:56,6,0	1/1:6,0:16:9.01:84,9,0	./.	1/1:17,6:25:9.02:121,9,0	1/1:9,5:14:6.02:93,6,0	1/1:13,1:16:3:28,3,0	0/0:14,0:15:14.76:0,15,233	1/1:11,3:14:9.01:115,9,0	1/1:16,5:19:8.97:139,9,0	1/1:6,2:7:12.04:186,12,0
chr10	12660425	.	TTC	T	6284.34	PASS	AB=0.868;AC=38;AF=0.679;AN=56;BaseQRankSum=-4.832;DP=528;FS=15.526;HRun=0;HaplotypeScore=110.3944;InbreedingCoeff=0.0600;MQ=72.31;MQ0=6;MQRankSum=2.591;QD=13.40;ReadPosRankSum=4.700;VQSLOD=3.8588;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:27:50.90:0,51,670	0/1:8,0:7:26.54:33,0,27	0/0:21,0:17:33.06:0,33,436	0/1:24,0:19:4.66:5,0,236	1/1:17,0:15:6.59:236,7,0	1/1:18,0:18:19.24:426,19,0	1/1:12,0:12:29.99:333,30,0	0/1:13,21:34:0.99:710,0,1	1/1:8,13:21:3.01:33,3,0	0/1:27,1:26:21.54:449,0,22	1/1:23,0:22:26.97:280,27,0	0/1:5,8:13:11.17:11,0,29	1/1:17,0:17:3.96:354,4,0	1/1:2,11:13:2.55:19,3,0	1/1:18,0:17:42.08:504,42,0	0/1:18,0:18:2.37:281,0,2	1/1:12,0:12:20.92:223,21,0	1/1:7,0:7:14.69:155,15,0	0/1:16,1:17:99:294,0,103	1/1:9,17:26:14.44:236,14,0	1/1:15,0:14:14.87:171,15,0	1/1:11,10:21:14.88:114,15,0	0/1:19,14:32:5.02:124,0,5	0/1:9,0:9:1.80:144,0,2	0/0:10,0:10:18.03:0,18,243	0/1:9,16:24:51.83:511,0,52	0/1:23,1:24:53.09:420,0,53	0/1:16,0:15:93.24:220,0,93
chr10	12660725	.	AAT	A	13142.55	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=8.906;DP=434;FS=12.615;HRun=0;HaplotypeScore=80.0229;InbreedingCoeff=0.8687;MQ=56.17;MQ0=2;MQRankSum=-1.767;QD=35.05;ReadPosRankSum=1.069;VQSLOD=6.6676;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:96.25:0,96,1570	1/1:0,7:7:9.03:132,9,0	0/0:10,0:2:6.02:0,6,97	0/0:7,0:4:8.57:0,9,127	1/1:1,23:24:60.08:801,60,0	1/1:1,21:22:57.19:830,57,0	1/1:0,24:24:63.21:917,63,0	1/1:1,21:21:57.15:767,57,0	1/1:0,11:11:15.05:209,15,0	1/1:0,27:27:81.25:1145,81,0	1/1:0,16:16:39.09:548,39,0	1/1:2,12:14:35.33:493,35,0	1/1:0,4:4:9.03:132,9,0	1/1:0,13:13:39.13:574,39,0	1/1:1,16:17:45.15:662,45,0	1/1:0,11:11:24.08:353,24,0	1/1:0,27:27:69.23:1015,69,0	1/1:1,9:10:24.08:353,24,0	1/1:2,7:8:20.66:267,21,0	1/1:3,30:33:87.29:1244,87,0	1/1:0,8:8:24.08:353,24,0	1/1:1,8:9:18.01:228,18,0	1/1:1,16:17:39.01:552,39,0	1/1:0,4:4:9.03:132,9,0	0/0:9,0:9:24.07:0,24,406	1/1:1,17:18:51.15:695,51,0	1/1:1,23:24:47.92:661,48,0	1/1:0,4:4:6.02:80,6,0
chr10	12661316	.	CCTCAA	C	27537.46	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=10.005;DP=637;FS=2.258;HRun=0;HaplotypeScore=137.3554;InbreedingCoeff=0.9939;MQ=87.24;MQ0=0;MQRankSum=-8.719;QD=52.75;ReadPosRankSum=6.052;VQSLOD=5.0252;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,114,3522	1/1:2,11:13:30.10:624,30,0	0/0:24,0:24:66.20:0,66,1851	0/0:28,0:29:83.83:0,84,2282	1/1:0,21:21:51.18:1087,51,0	1/1:3,20:23:57.20:1215,57,0	1/1:1,15:16:33.11:684,33,0	1/1:4,20:24:60.21:1278,60,0	1/1:2,26:28:78.27:1652,78,0	1/1:1,27:28:75.26:1582,75,0	1/1:0,21:21:57.20:1202,57,0	1/1:1,24:25:63.22:1332,63,0	1/1:2,23:25:66.23:1386,66,0	1/1:0,10:10:27.09:575,27,0	1/1:2,24:26:69.24:1460,69,0	1/1:1,21:22:60.21:1279,60,0	1/1:2,25:27:60.20:1279,60,0	1/1:1,10:11:21.07:437,21,0	1/1:3,13:16:39.12:755,39,0	1/1:1,28:29:78.18:1551,78,0	1/1:0,29:29:75.07:1593,75,0	1/1:0,27:27:66.23:1401,66,0	1/1:1,15:15:39.13:821,39,0	1/1:0,22:22:47.25:1021,47,0	0/0:22,0:22:66.23:0,66,2018	1/1:1,22:23:66.21:1349,66,0	1/1:4,29:33:78.27:1655,78,0	1/1:0,7:7:15.05:320,15,0
chr10	12662553	.	AAATAATAAT	A	1074.98	PASS	AC=24;AF=0.857;AN=28;BaseQRankSum=3.536;DP=151;FS=0.000;HRun=0;HaplotypeScore=54.5397;InbreedingCoeff=0.2731;MQ=53.35;MQ0=0;MQRankSum=-3.186;QD=15.81;ReadPosRankSum=-0.945;VQSLOD=0.9509;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:5:12.04:0,12,535	1/1:2,1:3:3.01:81,3,0	./.	./.	1/1:5,4:10:12.04:273,12,0	1/1:3,3:6:6.02:161,6,0	./.	./.	./.	1/1:3,1:4:3.01:80,3,0	1/1:4,2:6:3.01:72,3,0	1/1:2,1:3:3.01:81,3,0	1/1:2,1:3:3.01:81,3,0	1/1:4,1:5:3.01:79,3,0	./.	./.	1/1:11,0:11:2.98:22,3,0	1/1:5,2:7:3.01:81,3,0	./.	./.	./.	./.	./.	./.	0/0:2,0:5:4.45:0,4,112	1/1:5,1:6:3.01:81,3,0	1/1:3,1:4:3.01:81,3,0	./.
chr10	12663043	.	TCAGAACAATCA	T	18998.72	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=16.535;DP=520;FS=1.171;HRun=0;HaplotypeScore=186.1548;InbreedingCoeff=0.9618;MQ=56.34;MQ0=0;MQRankSum=-14.775;QD=75.69;ReadPosRankSum=4.165;VQSLOD=4.6386;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,114,6023	1/1:2,4:6:12.04:404,12,0	0/0:28,0:27:60.21:0,60,2994	0/0:20,0:19:42.14:0,42,1951	1/1:5,18:23:51.13:1438,51,0	0/0:23,0:23:60.21:0,60,3123	0/0:28,0:28:69.24:0,69,3621	0/0:33,0:33:69.24:0,69,3324	1/1:2,18:20:54.19:1803,54,0	1/1:6,17:23:54.17:1727,54,0	1/1:2,17:19:48.08:1398,48,0	1/1:4,11:15:36.11:1137,36,0	1/1:2,7:9:21.07:707,21,0	1/1:1,5:6:15.05:505,15,0	1/1:4,11:15:33.11:1076,33,0	1/1:1,14:15:42.14:1397,42,0	1/1:5,12:17:27.09:909,27,0	1/1:0,8:8:24.08:809,24,0	0/0:19,0:19:42.14:0,42,2207	0/0:28,0:28:69.24:0,69,3588	0/0:25,0:25:60.18:0,60,2712	1/1:1,13:14:39.13:1313,39,0	1/1:2,14:16:42.14:1339,42,0	1/1:6,4:10:12.04:343,12,0	0/0:22,0:22:57.20:0,57,3176	1/1:1,13:14:39.13:1278,39,0	1/1:4,16:20:39.13:1314,39,0	1/1:0,1:1:3.01:101,3,0
chr10	12663134	.	A	AACTGCCAGAT	50352	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-4.463;DP=490;FS=9.496;HRun=0;HaplotypeScore=165.5134;InbreedingCoeff=0.9171;MQ=61.77;MQ0=0;MQRankSum=-12.821;QD=120.46;ReadPosRankSum=2.135;VQSLOD=5.4833;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:91.60:0,92,2904	1/1:2,7:9:24.08:1275,24,0	0/0:16,0:16:48.16:0,48,1302	0/0:12,0:13:33.57:0,34,902	1/1:6,12:19:41.87:2219,42,0	1/1:11,19:31:75.26:3750,75,0	1/1:8,2:10:21.07:936,21,0	1/1:17,7:27:78.25:3531,78,0	1/1:4,11:15:45.15:2104,45,0	1/1:15,17:32:93.24:4415,93,0	1/1:11,11:22:42.14:2045,42,0	1/1:5,11:16:48.16:2313,48,0	1/1:3,6:10:26.92:1283,27,0	1/1:0,3:3:9.03:478,9,0	1/1:8,9:17:45.15:2127,45,0	1/1:7,4:11:27.09:961,27,0	1/1:6,3:9:21.07:887,21,0	1/1:3,1:5:12.02:491,12,0	1/1:9,9:20:57.20:2533,57,0	1/1:10,24:35:90.31:4585,90,0	1/1:5,5:14:18.06:956,18,0	1/1:10,22:35:84.29:4315,84,0	1/1:11,18:30:75.26:3804,75,0	1/1:2,2:5:3.01:159,3,0	0/0:11,0:11:30.10:0,30,867	1/1:3,10:13:33.11:1634,33,0	1/1:13,12:25:63.17:2915,63,0	1/1:1,3:4:12.04:636,12,0
chr10	12668537	.	T	TA	5914.84	PASS	AB=0.750;AC=45;AF=0.865;AN=52;BaseQRankSum=1.736;DP=304;FS=23.972;HRun=1;HaplotypeScore=30.5507;InbreedingCoeff=0.6433;MQ=35.45;MQ0=18;MQRankSum=-7.807;QD=25.06;ReadPosRankSum=-2.217;VQSLOD=2.7293;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:60.18:0,60,818	1/1:0,5:5:8.96:113,9,0	./.	0/0:13,0:2:6.02:0,6,84	1/1:0,10:10:14.88:177,15,0	1/1:0,14:10:21.07:323,21,0	0/1:4,2:4:38.57:39,0,41	1/1:6,9:1:2.97:20,3,0	1/1:0,11:11:21:304,21,0	1/1:1,13:12:33.09:481,33,0	1/1:0,9:9:26.95:369,27,0	1/1:1,13:13:27.09:429,27,0	1/1:0,7:6:12.04:191,12,0	1/1:0,9:7:14.98:208,15,0	1/1:0,10:10:26.92:367,27,0	1/1:0,9:8:17.99:248,18,0	1/1:2,10:9:15.05:238,15,0	1/1:1,3:4:9.03:143,9,0	1/1:7,9:7:20.97:278,21,0	1/1:0,14:14:35.59:350,36,0	./.	1/1:0,7:7:17.98:255,18,0	1/1:0,9:9:17.89:224,18,0	1/1:0,1:1:2.92:17,3,0	0/0:21,0:21:63.19:0,63,861	1/1:1,11:9:27.09:426,27,0	1/1:0,24:18:35.87:572,36,0	1/1:0,4:3:9.03:143,9,0
chr10	12668885	.	TG	T	577.17	PASS	AC=22;AF=0.846;AN=26;BaseQRankSum=0.112;DP=249;FS=0.000;HRun=3;HaplotypeScore=11.2295;InbreedingCoeff=0.2985;MQ=10.80;MQ0=196;MQRankSum=-0.335;QD=6.08;ReadPosRankSum=-1.304;VQSLOD=-0.1857;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	0/0:2,1:1:0.47:0,0,1	./.	./.	./.	1/1:8,2:2:6.02:74,6,0	1/1:4,3:3:9.03:111,9,0	./.	1/1:6,2:1:3.01:37,3,0	1/1:9,4:3:6.02:74,6,0	./.	1/1:6,2:1:3.01:37,3,0	1/1:6,1:1:3.01:37,3,0	./.	./.	1/1:14,4:3:6.02:74,6,0	./.	./.	1/1:1,2:3:3.01:37,3,0	1/1:2,1:1:3.01:37,3,0	1/1:2,0:1:3.01:37,3,0	0/0:18,0:6:15.05:0,15,215	1/1:12,4:3:9.03:111,9,0	./.	./.
chr10	12668937	.	C	CG	356.60	PASS	AC=12;AF=0.750;AN=16;BaseQRankSum=1.437;DP=105;FS=0.000;HRun=0;HaplotypeScore=16.2098;MQ=15.02;MQ0=59;MQRankSum=-0.423;QD=17.83;ReadPosRankSum=0.930;VQSLOD=4.5261;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	1/1:0,2:2:6.02:95,6,0	./.	./.	0/0:2,2:2:0:0,0,0	./.	./.	./.	1/1:0,1:1:3.01:48,3,0	1/1:0,2:2:5.98:68,6,0	1/1:0,5:4:3:48,3,0	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	1/1:1,4:4:3.01:37,3,0	./.	0/0:11,0:4:9.03:0,9,125	1/1:1,4:3:9.03:143,9,0	./.	./.
chr10	12675130	.	T	TA	1366.78	PASS	AB=0.869;AC=45;AF=0.804;AN=56;BaseQRankSum=0.409;DP=168;FS=1.664;HRun=13;HaplotypeScore=21.0765;InbreedingCoeff=0.4185;MQ=48.47;MQ0=12;MQRankSum=-1.328;QD=10.05;ReadPosRankSum=0.812;VQSLOD=1.3937;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:14:23.67:0,24,150	1/1:0,1:1:3:28,3,0	0/0:3,0:2:2.96:0,3,19	0/0:2,0:1:2.97:0,3,20	1/1:4,7:11:17.86:154,18,0	0/1:1,0:1:0:0,0,0	1/1:2,2:2:6.01:56,6,0	0/1:5,0:2:0:0,0,0	1/1:3,2:5:8.96:75,9,0	1/1:5,2:6:3:28,3,0	1/1:4,9:12:18.02:167,18,0	1/1:1,1:2:3:27,3,0	1/1:1,1:2:3:28,3,0	1/1:2,1:3:3:28,3,0	1/1:1,3:4:5.64:55,6,0	1/1:1,1:2:3:28,3,0	1/1:2,5:7:12.01:111,12,0	1/1:1,5:7:16.10:129,16,0	1/1:7,0:6:6.24:28,6,0	1/1:2,0:3:6.21:32,6,0	1/1:2,0:2:2.68:11,3,0	1/1:4,6:8:12.01:111,12,0	0/1:4,1:6:8.76:50,0,9	1/1:1,5:6:14.97:131,15,0	0/0:11,0:8:14.83:0,15,103	1/1:5,3:9:10.03:118,10,0	1/1:6,2:5:7.25:59,7,0	1/1:2,2:2:6.01:56,6,0
chr10	12675572	.	AAAG	A	11717.26	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=3.599;DP=566;FS=0.000;HRun=0;HaplotypeScore=91.7753;InbreedingCoeff=0.9792;MQ=56.62;MQ0=3;MQRankSum=-0.900;QD=24.62;ReadPosRankSum=3.905;VQSLOD=4.4225;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:22:51.14:0,51,961	1/1:0,9:9:18.02:235,18,0	0/0:26,0:14:17.34:0,17,210	0/0:13,0:9:21.03:0,21,335	1/1:8,19:27:47.62:580,48,0	1/1:3,12:15:27.09:388,27,0	1/1:0,11:11:27.09:388,27,0	1/1:9,15:23:42.11:549,42,0	1/1:2,17:18:36.08:494,36,0	1/1:4,20:24:57.12:760,57,0	1/1:12,17:28:41.53:504,42,0	1/1:1,13:14:30.06:407,30,0	1/1:2,18:20:41.71:552,42,0	1/1:1,10:11:12:149,12,0	1/1:2,14:16:30.10:430,30,0	1/1:5,6:11:18.06:259,18,0	1/1:8,16:23:36.09:517,36,0	1/1:6,17:21:36.07:492,36,0	1/1:4,15:18:42.06:517,42,0	1/1:5,25:29:59.14:771,59,0	1/1:4,12:16:18.02:235,18,0	1/1:4,14:18:36.06:474,36,0	1/1:4,23:27:68.23:873,68,0	1/1:5,12:17:24.08:345,24,0	0/0:27,0:26:66.21:0,66,1259	1/1:4,16:20:48.13:637,48,0	1/1:6,25:30:50.90:732,51,0	1/1:9,12:21:30.10:431,30,0
chr10	12675573	.	AAG	A	4268.82	PASS	AB=0.996;AC=31;AF=0.554;AN=56;BaseQRankSum=10.621;DP=563;FS=7.436;HRun=0;HaplotypeScore=104.6172;InbreedingCoeff=-0.2155;MQ=56.65;MQ0=4;MQRankSum=1.028;QD=9.04;ReadPosRankSum=10.534;VQSLOD=2.0699;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:21:54.11:0,54,865	1/1:9,0:9:10.51:79,11,0	0/0:29,0:13:26.86:0,27,299	0/0:13,0:9:23.58:0,24,279	0/1:25,1:26:98.43:217,0,98	0/1:15,0:15:19.74:121,0,20	1/1:11,0:11:26.32:153,26,0	0/1:24,0:23:99:197,0,143	1/1:19,0:18:12.10:181,12,0	0/1:23,0:23:36.34:279,0,36	0/1:27,1:27:99:233,0,161	0/1:14,0:14:0.69:122,0,1	1/1:19,1:20:41.06:267,41,0	0/1:11,0:11:14.80:37,0,15	1/1:16,0:16:9.23:177,9,0	0/1:11,0:11:72.78:73,0,75	0/1:24,0:23:99:148,0,117	0/1:21,0:20:34.10:156,0,34	0/1:20,0:18:32.50:185,0,32	1/1:28,2:29:12.70:343,13,0	0/1:16,0:16:56.44:56,0,82	0/1:18,0:18:45.52:129,0,46	1/1:25,2:27:44.44:419,44,0	0/1:17,0:17:38.63:104,0,39	0/0:27,0:26:66.21:0,66,1086	0/1:20,0:20:19.56:242,0,20	0/1:31,0:30:88.33:222,0,88	0/1:21,0:21:62.84:129,0,63
chr10	12676463	.	CA	C	7962.64	PASS	AB=0.547;AC=43;AF=0.827;AN=52;BaseQRankSum=-0.862;DP=492;FS=0.728;HRun=2;HaplotypeScore=45.2534;InbreedingCoeff=0.4023;MQ=24.79;MQ0=70;MQRankSum=-2.497;QD=18.74;ReadPosRankSum=0.077;VQSLOD=4.7179;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:16:30.10:0,30,467	1/1:1,14:15:24.08:329,24,0	./.	./.	1/1:4,38:39:38.94:536,39,0	1/1:1,18:18:21.07:286,21,0	1/1:3,9:10:27.09:363,27,0	1/1:6,15:13:36.11:487,36,0	1/1:1,14:14:30.10:406,30,0	1/1:3,34:35:45.21:1182,45,0	1/1:1,31:27:33.11:445,33,0	1/1:1,6:6:6.02:77,6,0	1/1:0,10:9:12.04:167,12,0	1/1:2,7:7:12.04:167,12,0	1/1:2,9:9:18.06:238,18,0	1/1:1,7:7:9.03:126,9,0	0/1:6,12:11:23.67:255,0,24	1/1:5,3:2:3.01:42,3,0	1/1:3,9:9:27.09:377,27,0	1/1:2,31:26:33.11:453,33,0	1/1:6,1:1:3.01:42,3,0	0/1:1,15:14:29.63:191,0,30	1/1:2,25:23:0.45:572,0,0	0/0:7,6:6:3.01:0,3,48	0/0:23,0:20:45.15:0,45,716	1/1:2,17:16:39.13:539,39,0	0/1:3,29:27:17.63:347,0,18	1/1:3,12:11:24.08:335,24,0
chr10	12680169	.	GA	G	10070.76	PASS	AB=0.526;AC=47;AF=0.839;AN=56;BaseQRankSum=3.436;DP=498;FS=64.951;HRun=8;HaplotypeScore=48.1374;InbreedingCoeff=0.8610;MQ=63.12;MQ0=3;MQRankSum=-1.299;QD=23.86;ReadPosRankSum=2.834;VQSLOD=0.0070;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:81.17:0,81,947	1/1:0,9:9:27.04:261,27,0	0/0:18,0:15:45.10:0,45,518	0/0:13,0:7:18.06:0,18,218	1/1:4,19:23:51.08:492,51,0	1/1:1,15:16:39.06:377,39,0	1/1:1,16:17:5.82:340,6,0	1/1:1,22:22:60.08:573,60,0	1/1:1,13:13:30.05:290,30,0	1/1:3,18:21:54.08:521,54,0	1/1:0,25:25:72.11:695,72,0	1/1:3,16:19:45.06:435,45,0	0/1:1,9:10:6.19:231,0,6	1/1:1,11:12:33.05:319,33,0	1/1:1,19:20:54.09:522,54,0	1/1:0,9:9:21.03:203,21,0	1/1:3,14:16:30.05:289,30,0	1/1:1,10:11:21.03:203,21,0	1/1:4,17:21:51.03:484,51,0	1/1:0,28:28:78.12:753,78,0	1/1:0,12:12:27.04:261,27,0	1/1:1,18:19:48.07:462,48,0	1/1:1,28:29:72.11:695,72,0	1/1:1,12:13:33.05:319,33,0	0/0:15,0:15:45.12:0,45,530	1/1:1,17:18:51.08:492,51,0	1/1:6,18:24:43.75:508,44,0	1/1:0,12:12:36.06:348,36,0
chr10	12681524	.	TA	T	11090.60	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=2.450;DP=553;FS=0.490;HRun=8;HaplotypeScore=62.3057;InbreedingCoeff=0.9935;MQ=86.03;MQ0=1;MQRankSum=-5.254;QD=23.95;ReadPosRankSum=5.204;VQSLOD=5.2216;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:54.14:0,54,625	1/1:1,12:13:32.42:298,32,0	0/0:25,0:23:46.22:0,46,494	0/0:30,0:27:27.63:0,28,422	1/1:1,30:31:84.09:802,84,0	1/1:5,20:25:60.09:579,60,0	1/1:1,10:11:27.04:261,27,0	1/1:4,28:32:84.09:797,84,0	1/1:1,17:18:39.06:377,39,0	1/1:4,31:35:93.15:897,93,0	1/1:1,24:25:60.08:578,60,0	1/1:1,9:10:21.03:203,21,0	1/1:1,15:16:33.05:319,33,0	1/1:0,10:10:27.04:261,27,0	1/1:0,8:8:21.03:203,21,0	1/1:2,14:16:39.06:377,39,0	1/1:0,8:8:24.04:232,24,0	1/1:1,11:12:18.03:174,18,0	1/1:5,25:30:75.03:698,75,0	1/1:4,31:34:90.14:869,90,0	1/1:0,15:15:42.07:405,42,0	1/1:0,14:14:42.02:395,42,0	1/1:1,26:27:66.10:637,66,0	1/1:4,9:12:36.04:341,36,0	0/0:17,0:17:45.14:0,45,543	1/1:2,15:17:45.07:434,45,0	1/1:2,30:32:72.12:695,72,0	1/1:1,9:10:27.04:261,27,0
chr10	12681682	.	G	GA	14309.64	PASS	AB=0.625;AC=47;AF=0.839;AN=56;BaseQRankSum=-10.009;DP=554;FS=0.000;HRun=7;HaplotypeScore=46.5284;InbreedingCoeff=0.8678;MQ=68.03;MQ0=0;MQRankSum=-3.552;QD=29.57;ReadPosRankSum=3.573;VQSLOD=5.0484;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:54.04:0,54,513	0/1:2,3:5:16.98:80,0,17	0/0:19,0:19:45.06:0,45,433	0/0:17,0:17:42.05:0,42,402	1/1:3,29:32:84.18:983,84,0	1/1:0,18:19:57.04:667,57,0	1/1:2,20:22:45.14:544,45,0	1/1:5,17:22:51.14:602,51,0	1/1:2,15:17:45.14:544,45,0	1/1:6,19:25:34.11:665,34,0	1/1:2,30:32:87.22:1034,87,0	1/1:0,9:9:24.07:290,24,0	1/1:1,22:23:63.19:761,63,0	1/1:0,19:19:54.17:652,54,0	1/1:2,11:13:33.10:399,33,0	1/1:0,12:12:36.11:435,36,0	1/1:1,21:22:57.17:688,57,0	1/1:1,9:10:21.06:254,21,0	1/1:5,11:16:33.10:399,33,0	1/1:0,32:32:90.23:1071,90,0	1/1:2,26:28:69.21:834,69,0	1/1:6,24:30:69.21:834,69,0	1/1:2,24:27:72.09:848,72,0	1/1:1,15:16:42.13:507,42,0	0/0:15,0:15:42.03:0,42,398	1/1:4,12:16:33.09:386,33,0	1/1:7,17:24:45.14:544,45,0	1/1:5,8:13:24.07:290,24,0
chr10	12682294	.	CTT	C	6168.75	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-4.656;DP=336;FS=12.720;HRun=9;HaplotypeScore=48.1593;InbreedingCoeff=0.9310;MQ=70.67;MQ0=3;MQRankSum=0.669;QD=28.17;ReadPosRankSum=3.918;VQSLOD=3.1103;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:72.22:0,72,1145	1/1:0,4:4:12.04:140,12,0	0/0:16,0:9:16.91:0,17,184	0/0:8,0:6:8.07:0,8,73	1/1:1,21:22:54.11:613,54,0	0/0:0,0:4:9.98:0,10,35	0/0:2,0:4:4.99:0,5,18	0/0:4,0:16:29.94:0,30,105	1/1:2,10:12:27.07:315,27,0	1/1:2,14:16:42.11:489,42,0	1/1:1,19:20:48.14:558,48,0	1/1:0,12:12:30.09:350,30,0	1/1:0,8:8:21.06:245,21,0	1/1:0,10:10:21.06:245,21,0	1/1:0,6:6:18.05:210,18,0	1/1:2,5:7:15.04:175,15,0	1/1:3,13:15:39.11:454,39,0	1/1:1,14:15:39.11:454,39,0	0/0:2,0:11:20.43:0,20,71	0/0:3,0:15:30.45:0,30,123	0/0:1,0:8:14.97:0,15,53	1/1:3,7:10:18.05:210,18,0	1/1:1,15:16:30.09:349,30,0	1/1:1,2:3:6.02:70,6,0	0/0:7,0:7:18.06:0,18,295	1/1:1,16:17:45.13:524,45,0	1/1:1,14:15:39.11:454,39,0	1/1:0,10:10:27.08:315,27,0
chr10	12685133	.	CAAAAA	C	6959.49	PASS	AB=0.764;AC=48;AF=0.857;AN=56;BaseQRankSum=2.320;DP=523;FS=7.417;HRun=18;HaplotypeScore=93.7823;InbreedingCoeff=0.3201;MQ=50.85;MQ0=21;MQRankSum=-0.905;QD=14.35;ReadPosRankSum=6.869;VQSLOD=0.6824;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:17,0:20:23.50:23,0,463	1/1:2,6:9:11.42:139,11,0	0/1:21,0:4:19.74:20,0,57	0/0:16,0:4:7.24:0,7,56	1/1:8,17:25:22.97:321,23,0	1/1:8,0:15:14.84:144,15,0	1/1:2,0:10:17.96:174,18,0	1/1:15,8:12:7.87:95,8,0	1/1:15,8:20:16.92:211,17,0	1/1:13,18:31:28.55:649,29,0	1/1:6,17:23:35.22:507,35,0	1/1:6,7:11:11.84:174,12,0	1/1:2,6:8:8.39:130,8,0	1/1:3,6:9:8.88:130,9,0	1/1:3,13:16:23.95:349,24,0	1/1:1,9:10:17.94:261,18,0	0/1:7,11:18:38.28:201,0,38	1/1:5,4:9:11.66:159,12,0	0/1:5,8:13:51.31:244,0,51	1/1:15,17:31:50.06:703,50,0	1/1:5,7:12:8.79:130,9,0	1/1:6,16:23:40.97:573,41,0	1/1:8,17:26:16.21:486,16,0	1/1:5,12:17:17.78:261,18,0	0/0:18,0:20:42.14:0,42,919	1/1:6,6:15:26.16:309,26,0	1/1:15,14:29:26.01:356,26,0	1/1:3,8:11:15.05:208,15,0
chr10	12685919	.	CA	C	8499.68	PASS	AB=0.653;AC=28;AF=0.538;AN=52;BaseQRankSum=6.654;DP=652;FS=19.574;HRun=6;HaplotypeScore=93.3262;InbreedingCoeff=-0.5456;MQ=41.75;MQ0=70;MQRankSum=-0.548;QD=14.33;ReadPosRankSum=1.044;VQSLOD=3.2440;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:22:60.20:0,60,789	0/1:4,8:11:12.34:231,0,12	./.	./.	1/1:14,13:16:33.08:354,33,0	1/1:7,23:23:14.71:508,15,0	0/1:10,8:14:75.50:75,0,137	1/1:5,12:9:27.04:280,27,0	0/1:12,13:17:76.18:312,0,76	0/1:12,27:32:31.22:741,0,31	0/1:11,30:36:37.08:692,0,37	0/1:10,8:13:85.18:225,0,85	0/1:11,3:9:74.85:75,0,137	0/1:8,11:14:42.77:286,0,43	0/1:8,10:14:82.15:254,0,82	0/1:8,9:13:85.19:225,0,85	0/1:16,23:31:99:499,0,235	0/1:18,10:26:99:222,0,375	0/1:11,11:15:78.87:283,0,79	1/1:11,22:23:24.06:574,24,0	0/1:15,9:23:99:165,0,438	0/1:9,18:22:55.93:458,0,56	0/1:7,17:22:64.28:429,0,64	0/1:7,6:13:99:125,0,235	0/0:23,0:22:57.18:0,57,737	0/1:12,9:16:99:248,0,155	0/1:16,29:36:70.51:718,0,71	0/1:4,18:20:18.77:520,0,19
chr10	12688075	.	C	CAA	5253.95	PASS	AB=0.793;AC=45;AF=0.833;AN=54;BaseQRankSum=1.363;DP=428;FS=3.656;HRun=13;HaplotypeScore=88.6403;InbreedingCoeff=0.6416;MQ=58.93;MQ0=16;MQRankSum=-3.066;QD=14.24;ReadPosRankSum=-0.452;VQSLOD=3.9878;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:23:34.88:0,35,273	1/1:4,6:10:17.78:188,18,0	0/1:27,0:8:2.42:2,0,58	0/0:27,0:15:14.96:0,15,137	1/1:10,16:30:62.28:629,62,0	1/1:5,0:13:15.03:150,15,0	1/1:2,0:4:9.01:86,9,0	1/1:12,1:10:23.52:235,24,0	1/1:4,5:7:11.97:140,12,0	1/1:13,13:25:46.68:520,47,0	1/1:16,7:25:23.48:223,23,0	1/1:3,3:7:6.02:81,6,0	0/1:5,3:5:0:0,0,0	1/1:3,4:6:17.97:208,18,0	1/1:4,3:3:6.02:82,6,0	1/1:4,4:7:18.05:218,18,0	1/1:7,8:14:0.13:254,0,0	1/1:8,1:9:8.86:92,9,0	1/1:8,1:15:31.26:293,31,0	1/1:21,0:24:35.29:264,35,0	./.	1/1:8,7:16:33.49:312,33,0	1/1:8,12:22:29.79:338,30,0	0/1:7,6:11:1.54:153,0,2	0/0:7,0:8:11.29:0,11,120	1/1:12,3:13:29.28:333,29,0	1/1:10,6:16:29.13:272,29,0	1/1:3,5:10:17.03:180,17,0
chr10	12688085	.	A	AGT	1105.47	PASS	AB=0.853;AC=15;AF=0.278;AN=54;BaseQRankSum=7.882;DP=461;FS=74.448;HRun=0;HaplotypeScore=103.0242;InbreedingCoeff=-0.2912;MQ=65.11;MQ0=13;MQRankSum=-7.473;QD=4.70;ReadPosRankSum=3.723;VQSLOD=-0.6676;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:57.17:0,57,807	0/1:9,2:11:78.23:78,0,148	0/0:36,0:15:29.66:0,30,251	0/0:34,0:20:35.44:0,35,437	0/1:26,6:32:99:247,0,353	0/0:14,0:13:20.42:0,20,208	0/1:7,1:6:20.70:21,0,94	0/0:16,0:13:38.56:0,39,398	0/1:8,2:8:40.05:40,0,43	0/1:23,3:24:92.43:92,0,434	0/1:16,7:23:99:255,0,313	1/1:5,0:5:0.47:1,0,0	0/0:8,2:7:12.04:0,12,165	0/1:9,1:8:34.24:34,0,115	0/0:6,2:4:5.75:0,6,31	0/0:8,1:6:17.28:0,17,105	0/0:19,0:16:23.31:0,23,230	0/1:4,3:7:36.99:37,0,92	0/0:17,1:16:47.44:0,47,464	0/1:21,5:24:99:198,0,419	./.	0/1:18,3:20:99:136,0,321	0/1:20,1:20:18.96:19,0,188	0/0:15,1:13:15.79:0,16,156	0/0:13,0:12:36.08:0,36,493	0/1:14,5:17:13.47:13,0,308	0/1:15,1:15:82.75:83,0,208	0/0:10,0:10:17.21:0,17,127
chr10	12688342	.	G	GA	4208.51	PASS	AB=0.792;AC=23;AF=0.411;AN=56;BaseQRankSum=13.827;DP=763;FS=7.034;HRun=0;HaplotypeScore=117.1552;InbreedingCoeff=-0.6950;MQ=64.22;MQ0=23;MQRankSum=-9.919;QD=6.46;ReadPosRankSum=3.555;VQSLOD=3.2654;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:72.11:0,72,1005	0/1:13,2:15:50.32:50,0,500	0/0:14,0:12:35.95:0,36,462	0/0:25,0:16:45.14:0,45,603	0/1:27,5:30:13.87:14,0,950	0/1:30,13:38:99:268,0,1086	0/1:18,6:23:99:170,0,630	0/1:21,14:34:99:441,0,690	0/1:22,14:33:99:387,0,747	0/1:24,18:34:99:378,0,810	0/1:19,9:26:99:128,0,632	0/1:22,4:26:99:119,0,741	0/1:15,8:21:99:245,0,484	0/1:15,4:18:99:137,0,531	0/1:20,8:24:38.28:38,0,655	0/1:17,9:24:99:268,0,562	0/1:20,7:26:99:188,0,721	0/1:17,5:21:99:133,0,567	0/1:14,5:17:99:138,0,401	0/0:32,1:33:42.35:0,42,1167	0/1:22,9:29:99:256,0,702	0/1:18,4:22:89.18:89,0,573	0/1:21,10:26:99:144,0,724	0/1:17,5:22:89.20:89,0,573	0/0:11,0:11:33.11:0,33,461	0/1:26,5:29:59.29:59,0,964	0/1:33,18:47:99:424,0,1127	0/1:15,3:17:44.41:44,0,578
chr10	12688395	.	C	CA	7353.76	PASS	AB=0.748;AC=24;AF=0.429;AN=56;BaseQRankSum=21.048;DP=889;FS=2.716;HRun=6;HaplotypeScore=149.9270;InbreedingCoeff=-0.7500;MQ=53.38;MQ0=9;MQRankSum=-9.085;QD=9.00;ReadPosRankSum=0.512;VQSLOD=1.7060;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:54.12:0,54,551	0/1:13,4:16:70.99:71,0,295	0/0:17,0:15:33.03:0,33,321	0/0:20,0:16:38.85:0,39,365	0/1:35,19:53:99:494,0,768	0/1:24,19:42:99:568,0,470	0/1:15,15:29:99:415,0,292	0/1:28,18:43:99:419,0,564	0/1:26,11:32:99:238,0,524	0/1:36,20:51:99:389,0,731	0/1:23,21:42:99:533,0,444	0/1:19,4:22:87.77:88,0,449	0/1:19,7:23:99:117,0,399	0/1:14,12:24:99:323,0,191	0/1:22,12:33:99:252,0,517	0/1:17,10:25:99:238,0,324	0/1:22,7:29:99:235,0,414	0/1:17,7:23:99:191,0,369	0/1:21,12:27:99:250,0,409	0/1:28,7:34:99:160,0,630	0/1:22,9:31:99:255,0,497	0/1:19,11:30:99:297,0,384	0/1:26,9:34:99:249,0,431	0/1:17,9:26:99:256,0,367	0/0:16,0:16:42.07:0,42,420	0/1:21,13:33:99:394,0,475	0/1:29,29:54:99:750,0,592	0/1:13,6:19:99:169,0,341
chr10	12688484	.	C	CT	8800.66	PASS	AB=0.731;AC=24;AF=0.429;AN=56;BaseQRankSum=22.131;DP=943;FS=1.192;HRun=1;HaplotypeScore=148.6186;InbreedingCoeff=-0.7774;MQ=53.05;MQ0=34;MQRankSum=-8.036;QD=10.23;ReadPosRankSum=2.171;VQSLOD=2.9407;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:63.20:0,63,816	0/1:10,7:16:99:188,0,236	0/0:32,0:12:36.11:0,36,440	0/0:14,0:4:0.11:0,0,96	0/1:35,20:54:99:522,0,1062	0/1:28,16:41:99:375,0,959	0/1:17,16:31:99:371,0,514	0/1:27,13:32:99:226,0,730	0/1:27,17:41:99:545,0,781	0/1:28,14:40:99:344,0,866	0/1:30,9:38:99:252,0,867	0/1:19,9:26:99:155,0,631	0/1:17,11:26:99:289,0,514	0/1:18,16:33:99:563,0,599	0/1:22,21:40:99:464,0,665	0/1:15,12:25:99:285,0,479	0/1:25,15:39:99:519,0,738	0/1:27,6:31:99:224,0,805	0/1:9,9:16:99:311,0,264	0/1:25,20:43:99:681,0,731	0/1:24,15:38:99:461,0,787	0/1:27,10:35:99:293,0,730	0/1:21,13:33:99:423,0,525	0/1:20,13:31:99:340,0,602	0/0:15,0:15:39.13:0,39,506	0/1:26,16:40:99:551,0,781	0/1:42,12:51:99:311,0,1228	0/1:6,4:9:99:108,0,205
chr10	12689416	.	GC	G	2088.99	PASS	AB=0.608;AC=38;AF=0.731;AN=52;BaseQRankSum=6.161;DP=345;FS=36.582;HRun=4;HaplotypeScore=28.4111;InbreedingCoeff=0.5536;MQ=32.26;MQ0=37;MQRankSum=-5.611;QD=9.76;ReadPosRankSum=-0.254;VQSLOD=-0.7202;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:27:72.21:0,72,971	1/1:0,6:5:11.25:115,11,0	0/0:16,0:3:9.03:0,9,115	0/0:20,0:2:3.01:0,3,42	1/1:0,11:8:15.05:179,15,0	0/0:30,0:30:60.20:0,60,839	0/0:19,0:14:30.10:0,30,415	0/1:8,7:8:75.81:76,0,142	1/1:4,4:3:6.02:72,6,0	1/1:3,7:3:9.03:108,9,0	1/1:2,11:9:15.05:180,15,0	1/1:0,9:4:6.02:72,6,0	1/1:1,4:2:3.01:36,3,0	0/1:2,14:8:29.53:96,0,30	1/1:0,8:3:6.02:72,6,0	1/1:0,7:4:3.01:36,3,0	1/1:0,11:8:15.05:180,15,0	1/1:0,7:5:6.02:72,6,0	1/1:5,11:7:21.06:252,21,0	1/1:1,18:10:12.04:144,12,0	./.	1/1:0,5:5:3.01:36,3,0	1/1:0,14:8:15.05:179,15,0	1/1:0,6:4:9.03:108,9,0	0/0:15,0:15:39.13:0,39,546	1/1:2,8:4:6.02:72,6,0	1/1:2,15:9:15.04:180,15,0	./.
chr10	12690546	.	TTCTTTAGGCAGGA	T	668.99	PASS	AB=0.943;AC=7;AF=0.140;AN=50;BaseQRankSum=4.023;DP=717;FS=13.974;HRun=0;HaplotypeScore=66.0181;InbreedingCoeff=-0.0331;MQ=24.09;MQ0=194;MQRankSum=0.142;QD=3.66;ReadPosRankSum=1.972;VQSLOD=0.1661;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:49,2:29:99:104,0,614	0/0:6,0:5:12.04:0,12,476	./.	./.	0/0:16,0:8:9.02:0,9,425	1/1:20,2:10:3.01:122,3,0	./.	0/0:40,1:1:3.01:0,3,194	0/0:38,0:22:11.71:0,12,625	0/0:21,0:8:21.07:0,21,1271	0/0:25,0:17:15.05:0,15,999	0/1:20,1:10:99:107,0,589	0/1:29,1:17:99:109,0,568	0/1:25,1:14:99:117,0,194	0/0:22,0:10:9.03:0,9,457	0/0:19,0:9:6.02:0,6,238	0/0:29,0:13:3.01:0,3,200	0/1:28,5:16:99:230,0,566	0/0:16,0:5:15.05:0,15,953	0/0:21,0:18:45.15:0,45,2598	0/0:35,0:17:6.02:0,6,220	0/0:22,0:8:11.64:0,12,744	0/0:15,0:8:6.02:0,6,238	0/0:35,1:21:27.09:0,27,1316	0/0:24,0:16:18.06:0,18,1141	0/0:24,1:11:27.09:0,27,1616	0/0:33,0:12:9:0,9,329	0/0:11,0:3:3.01:0,3,200
chr10	12692354	.	TAC	T	733.52	PASS	AC=8;AF=0.160;AN=50;BaseQRankSum=3.242;DP=607;FS=3.421;HRun=0;HaplotypeScore=43.4828;InbreedingCoeff=0.7041;MQ=24.84;MQ0=130;MQRankSum=-4.554;QD=8.06;ReadPosRankSum=1.360;VQSLOD=3.0118;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:18:27.09:0,27,520	0/0:11,0:7:5.84:0,6,81	./.	./.	0/0:50,0:19:6.02:0,6,115	0/0:27,0:20:39.13:0,39,750	0/0:16,0:5:3.01:0,3,58	1/1:6,7:1:3.01:46,3,0	0/0:8,0:7:12.04:0,12,231	0/0:38,0:13:36.08:0,36,646	0/0:34,0:20:15.05:0,15,289	0/0:14,0:8:9.03:0,9,174	0/0:24,0:15:15.05:0,15,289	0/0:21,0:8:12.04:0,12,222	0/0:10,0:9:18.06:0,18,347	0/0:12,0:10:9.03:0,9,173	0/0:14,0:5:15.05:0,15,270	0/0:26,0:8:15.05:0,15,283	1/1:8,12:10:30.10:459,30,0	1/1:12,31:21:18.06:275,18,0	1/1:9,6:5:6.02:92,6,0	0/0:27,0:16:6.02:0,6,115	0/0:36,0:15:15.05:0,15,277	0/0:16,0:6:6.02:0,6,116	0/0:20,0:16:24.03:0,24,424	0/0:40,0:18:48.16:0,48,915	0/0:33,0:20:33.11:0,33,635	./.
chr10	12692552	.	G	GA	7556.73	PASS	AB=0.556;AC=47;AF=0.839;AN=56;BaseQRankSum=-3.882;DP=333;FS=0.000;HRun=5;HaplotypeScore=34.6330;InbreedingCoeff=0.7664;MQ=65.00;MQ0=2;MQRankSum=-3.935;QD=27.09;ReadPosRankSum=0.211;VQSLOD=3.5016;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:54.13:0,54,580	0/1:2,8:9:11.11:216,0,11	0/0:6,0:4:8.75:0,9,69	0/0:10,0:9:10.60:0,11,82	1/1:3,19:22:57.19:750,57,0	1/1:0,14:14:21.07:276,21,0	1/1:2,9:9:18.05:222,18,0	1/1:7,5:4:6.02:79,6,0	1/1:0,10:10:27.09:355,27,0	1/1:2,14:15:36.12:474,36,0	1/1:2,15:18:42.11:532,42,0	1/1:0,8:8:18.06:237,18,0	1/1:1,10:10:12.04:158,12,0	1/1:0,6:5:12.04:158,12,0	1/1:0,7:4:12.04:158,12,0	1/1:1,3:4:9.03:118,9,0	1/1:0,4:3:9.03:118,9,0	1/1:1,12:12:24.08:316,24,0	1/1:3,6:8:18.06:235,18,0	1/1:1,20:21:42.14:552,42,0	1/1:1,8:9:18.06:237,18,0	1/1:0,12:12:30.10:395,30,0	1/1:3,14:16:39.13:513,39,0	1/1:0,6:6:18.06:237,18,0	0/0:16,0:16:45.11:0,45,484	1/1:2,12:14:36.12:473,36,0	1/1:2,10:11:17.93:236,18,0	1/1:0,13:13:39.13:513,39,0
chr10	12693915	.	TTCTC	T	18318.58	PASS	AB=0.569;AC=47;AF=0.839;AN=56;BaseQRankSum=4.417;DP=660;FS=0.968;HRun=0;HaplotypeScore=101.4825;InbreedingCoeff=0.8121;MQ=65.57;MQ0=42;MQRankSum=-3.652;QD=35.57;ReadPosRankSum=6.571;VQSLOD=4.6544;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:37:63.22:0,63,1768	1/1:1,4:2:6.02:126,6,0	0/0:38,0:26:75.25:0,75,1903	0/0:43,0:26:65.90:0,66,1776	1/1:0,16:15:39.01:726,39,0	1/1:3,15:14:27.09:530,27,0	1/1:4,18:19:39.13:816,39,0	1/1:6,3:3:6.02:116,6,0	1/1:2,27:23:30.10:627,30,0	1/1:1,22:19:57.20:1185,57,0	1/1:1,13:11:27.09:565,27,0	1/1:4,21:20:29.52:627,30,0	1/1:1,19:17:30.57:629,31,0	1/1:2,18:17:24.08:475,24,0	1/1:1,14:11:12:208,12,0	1/1:2,18:18:42.10:835,42,0	1/1:4,25:23:60.21:1256,60,0	0/1:7,22:24:37.63:791,0,38	1/1:8,13:12:36.08:711,36,0	1/1:2,18:15:36.01:665,36,0	1/1:9,42:42:99:2135,102,0	1/1:0,17:14:30.10:628,30,0	1/1:0,20:19:48.16:1003,48,0	1/1:6,11:13:23.66:502,24,0	0/0:21,0:18:42.14:0,42,1214	1/1:0,29:26:75.26:1536,75,0	1/1:5,32:24:54.66:1123,55,0	1/1:0,9:9:24.08:503,24,0
chr10	12694774	.	GCC	G	9617.28	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=8.826;DP=696;FS=5.389;HRun=10;HaplotypeScore=224.9260;InbreedingCoeff=0.9821;MQ=54.54;MQ0=10;MQRankSum=-5.368;QD=15.46;ReadPosRankSum=4.638;VQSLOD=1.0888;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:75.08:0,75,1109	1/1:2,13:15:35.24:227,35,0	0/0:16,0:13:20.16:0,20,185	0/0:13,0:10:17.01:0,17,176	1/1:8,25:31:50.98:300,51,0	1/1:4,24:27:66.99:446,67,0	1/1:12,18:30:55.21:318,55,0	1/1:7,5:11:11.85:86,12,0	1/1:6,18:24:59.07:413,59,0	1/1:6,24:30:67.68:576,68,0	1/1:3,27:30:80.50:481,80,0	1/1:4,18:23:15.98:258,16,0	1/1:4,15:20:47.30:327,47,0	1/1:7,18:24:52.96:317,53,0	1/1:5,21:24:51.27:346,51,0	1/1:6,23:28:64.31:424,64,0	1/1:2,31:33:85.55:680,86,0	1/1:4,21:25:65.51:504,66,0	1/1:7,14:22:41.66:338,42,0	1/1:5,22:25:64.82:436,65,0	1/1:6,20:26:59.18:459,59,0	1/1:7,26:31:64.92:392,65,0	1/1:3,21:23:59.69:370,60,0	1/1:5,13:17:38.51:301,39,0	0/0:13,0:13:24.08:0,24,372	1/1:4,35:36:98.48:851,98,0	1/1:7,33:39:94.02:585,94,0	1/1:0,9:9:23.84:183,24,0
chr10	12694785	.	A	AG	18874.30	PASS	AB=1.000;AC=50;AF=0.893;AN=56;BaseQRankSum=5.275;DP=690;FS=15.605;HRun=0;HaplotypeScore=174.5491;InbreedingCoeff=0.8001;MQ=51.57;MQ0=6;MQRankSum=-4.870;QD=29.13;ReadPosRankSum=5.033;VQSLOD=2.9630;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:90.07:0,90,1125	1/1:1,13:14:36.09:400,36,0	0/1:8,0:7:0.26:0,0,72	0/1:12,0:8:3.24:3,0,133	1/1:0,34:32:57.11:615,57,0	1/1:5,24:28:69.15:784,69,0	1/1:6,18:24:69.16:778,69,0	1/1:2,14:16:36.10:492,36,0	1/1:0,22:21:54.14:650,54,0	1/1:3,32:34:86.47:1163,86,0	1/1:2,29:31:87.14:918,87,0	1/1:1,21:23:59.74:629,60,0	1/1:3,15:19:54.08:643,54,0	1/1:1,21:22:63.12:671,63,0	1/1:6,21:26:72.16:829,72,0	1/1:3,23:25:69.16:785,69,0	1/1:1,35:36:87.23:1099,87,0	1/1:4,21:25:72.22:925,72,0	1/1:2,22:24:63.17:785,63,0	1/1:2,28:30:69.18:789,69,0	1/1:5,20:25:69.20:895,69,0	1/1:2,26:28:78.15:797,78,0	1/1:1,30:30:63.06:671,63,0	1/1:1,17:17:36.10:455,36,0	0/0:11,0:11:33.08:0,33,432	1/1:0,40:38:99:1554,114,0	1/1:4,34:37:99:1180,105,0	1/1:2,9:11:30.08:365,30,0
chr10	12695887	.	GTTT	G	11776.23	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=4.754;DP=602;FS=21.629;HRun=10;HaplotypeScore=111.2260;InbreedingCoeff=0.9192;MQ=51.24;MQ0=37;MQRankSum=-4.063;QD=21.41;ReadPosRankSum=2.005;VQSLOD=1.7436;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:36.12:0,36,712	1/1:0,8:6:6.02:82,6,0	0/0:10,0:7:9.81:0,10,179	0/0:10,0:10:16.57:0,17,316	1/1:5,23:18:24.07:327,24,0	1/1:6,33:31:67.65:939,68,0	1/1:0,22:13:24.06:322,24,0	1/1:12,10:12:18.03:228,18,0	1/1:6,30:29:66.19:890,66,0	1/1:8,18:17:39.11:532,39,0	1/1:4,13:13:15.03:205,15,0	1/1:3,22:21:10.11:419,10,0	1/1:2,21:19:51.16:695,51,0	1/1:9,17:23:48.13:653,48,0	1/1:0,31:26:66.01:900,66,0	1/1:3,17:18:33.08:446,33,0	1/1:1,11:11:24.06:327,24,0	1/1:2,9:11:24.08:323,24,0	1/1:6,11:13:30.08:409,30,0	1/1:6,25:24:39.11:532,39,0	1/1:2,9:11:21.06:282,21,0	1/1:3,24:17:42.13:572,42,0	1/1:7,13:15:21:261,21,0	1/1:2,6:6:15.04:199,15,0	0/0:17,0:18:51.11:0,51,898	1/1:7,27:28:75.22:1007,75,0	1/1:9,36:40:78.20:1063,78,0	1/1:6,4:9:12.04:164,12,0
chr10	12695926	.	T	TA	7769.22	PASS	AB=0.732;AC=23;AF=0.411;AN=56;BaseQRankSum=-2.198;DP=670;FS=97.933;HRun=0;HaplotypeScore=117.3710;InbreedingCoeff=-0.7406;MQ=47.41;MQ0=28;MQRankSum=-6.542;QD=12.65;ReadPosRankSum=0.220;VQSLOD=1.6533;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:48.14:0,48,638	0/1:8,3:11:99:110,0,184	0/0:13,0:1:0.47:0,0,1	0/0:9,0:2:3:0,3,26	0/1:22,7:27:99:306,0,478	0/1:25,14:32:99:608,0,400	0/1:15,11:19:99:360,0,146	0/1:16,11:22:99:184,0,565	0/1:21,10:29:99:332,0,569	0/1:20,12:29:99:412,0,520	0/1:20,8:23:99:292,0,480	0/1:16,3:17:88.64:89,0,426	0/1:20,6:22:99:227,0,547	0/1:8,11:16:99:445,0,107	0/1:26,12:35:99:447,0,529	0/1:14,5:19:99:166,0,497	0/1:11,8:18:99:139,0,321	0/1:5,7:11:99:199,0,102	0/1:17,14:23:99:436,0,391	0/1:24,12:33:99:420,0,603	0/1:8,4:12:99:156,0,242	0/1:14,16:27:99:534,0,347	0/1:20,13:31:99:366,0,609	0/1:8,8:16:99:198,0,293	0/0:16,0:16:45.14:0,45,614	0/1:20,21:39:99:783,0,541	0/1:26,14:37:99:562,0,667	0/0:2,0:2:3.01:0,3,42
chr10	12696123	.	G	GCT	651.83	PASS	AB=0.821;AC=11;AF=0.196;AN=56;BaseQRankSum=6.425;DP=380;FS=28.408;HRun=0;HaplotypeScore=80.9264;InbreedingCoeff=-0.2482;MQ=79.97;MQ0=1;MQRankSum=-6.339;QD=4.94;ReadPosRankSum=0.288;VQSLOD=0.7328;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:93.30:0,93,1480	0/0:5,0:4:12.04:0,12,196	0/0:29,0:28:72.76:0,73,1140	0/0:26,0:26:75.25:0,75,1191	0/0:8,2:8:15.05:0,15,245	0/0:13,0:9:27.09:0,27,440	0/0:14,0:14:36.08:0,36,545	0/0:19,2:19:54.18:0,54,878	0/0:9,1:9:27.09:0,27,430	0/1:13,3:13:27.78:28,0,427	0/0:10,0:9:27.05:0,27,411	0/1:11,1:11:27.67:28,0,408	0/0:6,1:7:18.06:0,18,282	0/1:11,3:13:85.29:85,0,453	0/0:8,0:7:21.06:0,21,318	0/0:12,0:12:36.12:0,36,563	0/0:8,0:8:15.05:0,15,245	0/1:2,1:3:41.62:56,0,42	0/1:10,2:10:30.76:31,0,384	0/1:11,7:16:99:204,0,372	0/0:12,1:12:33.10:0,33,514	0/0:15,0:12:36.05:0,36,530	0/1:12,4:13:91.14:91,0,330	0/1:5,2:6:51.68:52,0,60	0/0:13,0:13:36.12:0,36,566	0/1:13,1:13:20.23:20,0,522	0/1:9,3:11:99:149,0,329	0/1:6,2:8:56.54:57,0,243
chr10	12696143	.	C	CA	628.76	PASS	AC=24;AF=0.706;AN=34;BaseQRankSum=3.207;DP=134;FS=0.963;HRun=0;HaplotypeScore=27.0959;InbreedingCoeff=0.5690;MQ=105.57;MQ0=17;MQRankSum=-1.372;QD=17.47;ReadPosRankSum=-6.233;VQSLOD=2.4923;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:63.21:0,63,865	1/1:3,0:3:8.99:93,9,0	0/0:25,0:18:32.15:0,32,635	0/0:26,0:23:68.79:0,69,890	./.	0/0:2,0:2:2.22:0,2,7	1/1:3,0:3:6.02:75,6,0	1/1:4,3:5:15.04:212,15,0	./.	1/1:2,1:2:3.01:47,3,0	./.	./.	./.	./.	1/1:1,1:1:6.01:62,6,0	1/1:0,1:1:3.01:37,3,0	1/1:3,0:1:2.98:22,3,0	./.	1/1:4,0:1:3:28,3,0	./.	./.	1/1:2,1:3:6.02:92,6,0	1/1:2,1:2:2.99:24,3,0	./.	0/0:12,0:12:35.99:0,36,474	1/1:2,0:1:2.98:21,3,0	1/1:1,1:1:3.01:45,3,0	./.
chr10	12696146	.	AAG	A	66.80	PASS	AC=8;AF=0.364;AN=22;BaseQRankSum=2.976;DP=123;FS=3.877;HRun=0;HaplotypeScore=35.5864;InbreedingCoeff=0.5961;MQ=104.60;MQ0=28;MQRankSum=-0.530;QD=5.57;ReadPosRankSum=-3.881;VQSLOD=1.2423;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:20:60.16:0,60,1177	./.	0/0:24,0:18:52.35:0,52,878	0/0:23,0:20:59.57:0,60,1182	./.	0/0:2,0:1:3.01:0,3,61	./.	1/1:3,2:3:9.01:96,9,0	./.	1/1:2,1:2:3:25,3,0	./.	./.	./.	./.	0/0:1,0:0:0:0,0,0	0/0:1,0:1:0:0,0,0	./.	./.	./.	./.	./.	1/1:2,1:3:2.12:21,2,0	./.	./.	0/0:10,0:10:30.10:0,30,607	./.	1/1:0,1:1:2.98:21,3,0	./.
chr10	12702739	.	C	CA	1636.51	PASS	AB=0.788;AC=21;AF=0.404;AN=52;BaseQRankSum=11.814;DP=654;FS=5.658;HRun=3;HaplotypeScore=87.5969;InbreedingCoeff=-0.5249;MQ=24.83;MQ0=219;MQRankSum=-0.217;QD=3.18;ReadPosRankSum=-0.081;VQSLOD=-0.1071;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:16:33.10:0,33,393	0/0:11,6:4:3.01:0,3,36	./.	0/0:4,0:1:3.01:0,3,36	./.	0/1:16,0:19:12.78:13,0,223	0/1:14,0:9:7.88:8,0,125	0/1:31,0:27:42.91:43,0,465	0/1:22,14:20:99:151,0,248	0/1:16,8:8:53.04:53,0,189	0/0:14,5:6:9.03:0,9,108	0/1:16,7:13:50.73:168,0,51	0/1:21,7:22:99:135,0,440	0/1:22,9:22:99:174,0,161	0/1:17,7:23:99:138,0,410	0/1:23,7:21:99:188,0,244	0/1:19,9:17:99:109,0,248	0/1:16,7:13:23.52:24,0,129	0/1:13,1:13:76.54:77,0,142	0/1:21,0:15:40.02:40,0,119	0/1:16,0:6:44.75:45,0,57	1/1:14,11:6:6.02:77,6,0	0/1:21,6:10:29.87:32,0,30	0/0:22,5:19:27.07:0,27,323	0/0:12,0:9:9.02:0,9,98	0/1:22,9:15:99:188,0,220	0/1:23,6:15:99:123,0,185	0/1:6,2:4:0:0,0,0
chr10	12703319	.	TC	T	2951.75	PASS	AB=0.711;AC=22;AF=0.423;AN=52;BaseQRankSum=7.002;DP=890;FS=0.000;HRun=4;HaplotypeScore=94.5790;InbreedingCoeff=-0.7053;MQ=37.98;MQ0=173;MQRankSum=-3.874;QD=4.03;ReadPosRankSum=-0.755;VQSLOD=-0.4794;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:29:60.16:0,60,787	0/1:11,4:13:7.26:7,0,304	./.	./.	0/1:23,12:19:99:149,0,118	0/1:15,5:19:9.37:9,0,500	0/0:25,5:23:48.04:0,48,606	0/0:29,8:23:30.20:0,30,802	0/1:29,18:40:99:168,0,753	0/1:23,18:27:99:241,0,556	0/1:24,16:31:99:157,0,449	0/1:18,16:30:55.69:56,0,536	0/1:13,11:18:99:105,0,335	0/1:12,15:22:99:171,0,333	0/1:21,12:29:92.53:93,0,494	0/1:12,7:19:99:115,0,395	0/1:26,26:43:99:202,0,498	0/1:15,15:21:99:133,0,366	0/1:21,17:26:99:347,0,428	0/1:21,20:32:99:365,0,320	0/1:25,11:30:5.75:6,0,769	0/1:16,13:18:71.71:72,0,317	0/1:29,15:29:15.83:16,0,611	0/1:12,19:24:99:249,0,170	0/0:17,0:14:24.08:0,24,335	0/1:26,12:31:99:126,0,899	0/1:28,20:41:99:260,0,815	0/1:6,4:8:56.94:57,0,111
chr10	12703555	.	GT	G	431.65	PASS	AB=0.836;AC=12;AF=0.214;AN=56;BaseQRankSum=1.676;DP=387;FS=2.272;HRun=1;HaplotypeScore=80.9951;InbreedingCoeff=-0.2678;MQ=51.44;MQ0=8;MQRankSum=-7.307;QD=2.09;ReadPosRankSum=3.389;VQSLOD=-0.7647;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:30.09:0,30,455	0/0:5,0:5:15.05:0,15,224	0/0:22,0:7:15.05:0,15,227	0/0:10,0:3:6.02:0,6,96	0/1:13,2:12:4.76:5,0,444	0/1:8,2:9:10.17:10,0,330	0/0:8,0:8:15.04:0,15,215	0/1:24,3:24:7.33:7,0,841	0/1:15,4:17:53.36:53,0,550	0/1:12,7:17:99:140,0,432	0/0:14,1:15:30.10:0,30,479	0/0:10,1:10:21.07:0,21,326	0/0:5,1:5:15.04:0,15,216	0/0:8,4:7:21.07:0,21,310	0/1:9,5:12:78.66:79,0,324	0/1:8,1:9:16.85:17,0,244	0/0:15,0:13:30.10:0,30,458	0/0:8,2:8:21.05:0,21,335	0/1:16,2:16:23.82:24,0,614	0/1:11,2:12:1.75:2,0,490	0/0:16,0:16:42.11:0,42,617	0/1:13,5:15:33.61:34,0,532	0/1:12,2:13:35.99:36,0,476	0/0:7,0:7:21.07:0,21,335	0/0:5,0:5:12.04:0,12,192	0/0:22,3:22:26.55:0,27,907	0/1:23,8:29:99:167,0,771	0/0:1,1:2:3.01:0,3,48
chr10	12703568	.	G	GTTT	7551.70	PASS	AB=1.000;AC=48;AF=0.857;AN=56;BaseQRankSum=-1.496;DP=342;FS=36.526;HRun=11;HaplotypeScore=65.3907;InbreedingCoeff=0.6898;MQ=49.35;MQ0=10;MQRankSum=0.520;QD=24.13;ReadPosRankSum=-0.515;VQSLOD=0.8737;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:10:23.94:0,24,261	1/1:0,4:4:12.04:225,12,0	0/0:12,0:7:11.39:0,11,62	0/1:6,0:3:9.84:35,0,10	1/1:12,2:12:17.97:207,18,0	1/1:6,2:9:15.03:233,15,0	1/1:3,4:9:16.30:235,16,0	1/1:10,0:16:35.56:276,36,0	1/1:10,10:19:39.11:678,39,0	1/1:10,5:13:21.07:381,21,0	1/1:2,11:14:29.86:516,30,0	1/1:7,3:10:9.03:156,9,0	1/1:4,4:7:21.06:328,21,0	1/1:7,2:5:9.03:151,9,0	1/1:11,2:12:21:258,21,0	1/1:5,4:9:9.03:168,9,0	1/1:2,8:10:18.06:339,18,0	1/1:7,6:10:26.94:452,27,0	1/1:9,0:11:14.99:142,15,0	1/1:6,7:12:27.05:440,27,0	1/1:1,0:11:23.89:180,24,0	1/1:10,4:12:24.04:379,24,0	1/1:6,2:9:15.03:217,15,0	1/1:2,3:5:9.03:169,9,0	0/0:3,0:3:6.02:0,6,70	1/1:8,13:21:48.11:754,48,0	1/1:16,10:27:41.92:631,42,0	0/1:2,0:2:0:0,0,0
chr10	12704718	.	A	AAGG	124.46	PASS	AB=0.804;AC=5;AF=0.100;AN=50;BaseQRankSum=3.226;DP=588;FS=26.652;HRun=0;HaplotypeScore=40.0254;InbreedingCoeff=0.0967;MQ=23.92;MQ0=216;MQRankSum=-2.440;QD=1.60;ReadPosRankSum=-1.631;VQSLOD=-0.0185;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:19:42.14:0,42,671	1/1:6,2:4:3.01:66,3,0	./.	./.	0/1:22,7:14:29.39:76,0,29	0/0:14,3:8:2.97:0,3,20	0/0:15,1:9:17.98:0,18,232	0/0:21,4:4:11.99:0,12,140	0/0:26,0:18:15.05:0,15,230	0/0:24,1:11:33.11:0,33,528	0/0:19,3:10:6.02:0,6,86	0/0:13,2:3:3.01:0,3,47	0/0:21,6:14:18.06:0,18,260	0/0:15,1:9:15.01:0,15,203	0/0:18,2:8:3.01:0,3,38	0/0:11,3:5:12.01:0,12,165	0/0:25,3:18:30.10:0,30,481	0/0:12,4:8:8.99:0,9,116	0/0:28,0:15:39.13:0,39,616	./.	0/0:18,4:10:21.03:0,21,309	0/1:17,5:10:56.86:57,0,60	0/1:14,5:10:12.97:34,0,13	0/0:25,5:20:24:0,24,326	0/0:18,0:13:26.96:0,27,431	0/0:22,2:12:36.12:0,36,577	0/0:10,5:5:12:0,12,164	0/0:5,1:3:3.01:0,3,48
chr10	12704889	.	C	CACAGCATTTGCCT	3966.39	PASS	AB=0.953;AC=23;AF=0.523;AN=44;BaseQRankSum=6.808;DP=546;FS=39.363;HRun=0;HaplotypeScore=57.1174;InbreedingCoeff=-0.1021;MQ=16.59;MQ0=347;MQRankSum=-1.848;QD=13.92;ReadPosRankSum=-0.163;VQSLOD=0.1534;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:6,0:5:6.02:0,6,225	./.	./.	0/1:14,0:13:75.48:75,0,475	1/1:18,1:4:3.01:93,3,0	0/1:23,1:4:92.98:93,0,117	./.	0/1:12,3:5:99:379,0,114	0/1:22,0:12:99:115,0,1030	./.	1/1:6,3:4:3.01:194,3,0	1/1:11,2:6:6.02:389,6,0	1/1:10,1:4:3.01:197,3,0	1/1:12,2:4:6.02:389,6,0	1/1:7,3:4:6.02:388,6,0	0/0:37,0:2:3.01:0,3,58	0/0:13,0:1:3.01:0,3,123	1/1:20,1:4:6.02:295,6,0	0/1:26,2:12:99:695,0,586	./.	0/1:21,3:18:99:372,0,472	0/1:20,0:11:15.73:16,0,356	0/0:17,1:3:3.01:0,3,123	0/0:14,0:8:14.87:0,15,545	0/1:18,0:6:87.46:87,0,319	0/0:12,3:8:9.03:0,9,368	0/1:16,0:10:99:190,0,152
chr10	12704966	.	CTTCCCTGCTGCTGG	C	2097.76	PASS	AB=0.862;AC=15;AF=0.326;AN=46;BaseQRankSum=6.787;DP=592;FS=16.790;HRun=0;HaplotypeScore=67.3593;InbreedingCoeff=-0.2473;MQ=18.98;MQ0=343;MQRankSum=-2.556;QD=7.47;ReadPosRankSum=2.790;VQSLOD=0.1160;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:16:21.07:0,21,1317	0/1:6,4:9:99:360,0,936	./.	./.	0/1:13,3:11:99:234,0,978	0/1:19,2:6:99:119,0,252	0/0:16,0:2:3.01:0,3,176	./.	1/1:14,2:5:3.01:128,3,0	0/1:33,2:15:85.83:86,0,2389	0/1:14,1:11:99:119,0,413	0/1:12,4:8:99:244,0,411	0/1:15,4:8:99:119,0,414	0/0:16,2:10:14.60:0,15,941	0/1:19,4:11:99:238,0,694	0/0:15,0:2:3.01:0,3,211	./.	0/1:15,2:5:99:119,0,414	0/0:25,2:7:9.03:0,9,522	0/0:18,5:12:21.07:0,21,1282	1/1:45,5:5:3.01:128,3,0	0/1:14,5:14:99:238,0,671	0/0:20,3:13:11.96:0,12,734	./.	0/0:8,0:7:15.01:0,15,864	0/0:17,0:4:9.03:0,9,634	0/1:23,1:9:99:107,0,1169	0/0:12,0:8:8.95:0,9,365
chr10	12705245	.	CA	C	507.80	PASS	AB=0.774;AC=9;AF=0.161;AN=56;BaseQRankSum=8.565;DP=710;FS=5.365;HRun=2;HaplotypeScore=100.8524;InbreedingCoeff=-0.2035;MQ=56.71;MQ0=49;MQRankSum=-5.597;QD=1.95;ReadPosRankSum=1.670;VQSLOD=-0.6300;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,111,1561	0/0:7,0:7:21.06:0,21,295	0/0:29,0:22:24.19:0,24,557	0/0:29,0:25:66.18:0,66,944	0/0:27,0:27:63.14:0,63,895	0/1:17,7:19:26.57:27,0,607	0/0:16,4:15:6.43:0,6,589	0/0:17,6:17:45.15:0,45,674	0/1:27,10:28:8.51:9,0,874	0/1:19,5:22:95.52:96,0,642	0/0:13,2:14:33.11:0,33,494	0/1:9,12:17:99:152,0,338	0/1:11,3:13:38.64:39,0,455	0/1:18,13:21:23.51:24,0,645	0/0:22,9:23:21.34:0,21,797	0/1:19,6:19:71.58:72,0,494	0/0:39,8:41:2.81:0,3,1456	0/0:19,4:21:18.31:0,18,770	0/0:18,5:19:51.16:0,51,741	0/0:24,2:25:30.24:0,30,925	0/1:49,8:54:50.23:50,0,1743	0/0:22,3:21:21.38:0,21,807	0/0:14,1:14:36.09:0,36,515	0/0:17,5:21:15.35:0,15,725	0/0:15,0:15:45.15:0,45,673	0/0:21,4:21:54.18:0,54,808	0/1:17,10:21:99:179,0,485	0/0:10,0:10:30.03:0,30,402
chr10	12705700	.	AGAG	A	22638.01	PASS	AB=0.662;AC=26;AF=0.481;AN=54;BaseQRankSum=0.833;DP=1294;FS=0.279;HRun=0;HaplotypeScore=175.7780;InbreedingCoeff=-0.6499;MQ=44.89;MQ0=74;MQRankSum=3.421;QD=19.23;ReadPosRankSum=2.651;VQSLOD=4.5842;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:54:99:0,148,3326	0/1:11,11:19:99:438,0,425	./.	0/0:25,0:1:2.37:0,2,8	0/1:28,21:39:99:825,0,721	0/1:21,26:33:99:853,0,272	0/1:32,22:31:99:728,0,211	0/1:18,17:23:99:616,0,193	1/1:22,20:24:31.18:758,31,0	0/1:37,44:66:99:1877,0,1330	0/1:30,9:27:99:332,0,626	0/1:19,21:28:41.77:872,0,42	1/1:14,27:33:30.22:1271,30,0	0/1:19,25:31:55.73:927,0,56	0/1:19,29:36:99:1112,0,108	0/1:14,19:25:99:753,0,225	0/1:28,15:31:99:552,0,178	0/1:11,20:24:99:601,0,113	0/1:12,21:22:13.72:738,0,14	0/1:28,18:38:99:689,0,989	0/1:62,68:109:99:1953,0,254	0/1:48,41:75:99:1285,0,1628	0/1:23,28:43:99:1036,0,643	0/1:27,30:35:15.74:1027,0,16	0/0:21,0:21:60.20:0,60,1304	0/1:14,29:39:99:1313,0,403	0/1:14,26:30:99:1065,0,211	0/1:16,22:33:99:1015,0,308
chr10	12705796	.	TAC	T	489.61	PASS	AB=0.974;AC=22;AF=0.423;AN=52;BaseQRankSum=9.041;DP=967;FS=38.453;HRun=0;HaplotypeScore=285.8830;InbreedingCoeff=-0.1795;MQ=45.41;MQ0=19;MQRankSum=-8.833;QD=0.71;ReadPosRankSum=2.628;VQSLOD=1.5005;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:37,0:37:4.13:4,0,650	0/0:10,0:9:2.74:0,3,12	./.	./.	0/0:26,2:27:3.84:0,4,21	0/1:29,0:23:6.58:7,0,33	1/1:46,0:44:4.12:17,4,0	0/0:33,0:22:11.16:0,11,49	0/1:48,1:44:4.64:5,0,57	0/1:47,1:43:59.33:127,0,59	0/0:26,0:25:11.54:0,12,68	0/1:32,0:27:19.27:19,0,79	0/1:20,0:18:41.70:42,0,50	0/0:39,0:34:31.73:0,32,182	0/1:42,1:39:15.08:15,0,82	0/1:27,1:27:24.85:31,0,25	0/1:30,1:24:24.12:24,0,30	0/0:20,0:16:1.50:0,1,58	0/1:33,0:23:10.74:36,0,11	0/1:39,3:41:0.02:0,0,0	0/1:88,0:77:40.80:41,0,41	0/0:35,0:34:8.85:0,9,57	0/1:31,2:33:7.91:8,0,14	0/1:39,0:27:1.97:2,0,35	0/0:13,0:13:27.40:0,27,410	1/1:42,1:41:3.64:133,4,0	1/1:25,1:24:0.77:63,1,0	1/1:14,0:12:1.01:56,1,0
chr10	12705821	.	ACACACACACACT	A	6517.35	PASS	AB=0.995;AC=27;AF=0.482;AN=56;BaseQRankSum=4.266;DP=1098;FS=3.980;HRun=0;HaplotypeScore=406.5172;InbreedingCoeff=-0.3863;MQ=41.38;MQ0=35;MQRankSum=-4.553;QD=7.29;ReadPosRankSum=-1.677;VQSLOD=1.9415;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:42:99:0,100,3039	1/1:14,0:13:1.43:79,1,0	0/0:38,0:8:16.99:0,17,248	0/0:46,0:8:20.96:0,21,265	0/1:32,0:28:90.67:91,0,132	0/1:36,0:27:99:134,0,118	0/0:59,0:50:8.68:0,9,212	0/1:34,0:20:99:403,0,145	0/1:49,0:42:64.80:234,0,65	0/1:54,0:47:99:559,0,118	0/1:38,0:37:99:223,0,118	0/1:40,1:38:23:331,0,23	0/1:36,1:28:86.04:344,0,86	0/1:50,0:41:99:252,0,102	0/1:47,1:43:99:407,0,112	0/1:36,0:31:88.58:144,0,89	0/1:38,0:31:67.17:217,0,67	0/1:20,0:14:48.13:48,0,89	1/1:29,2:15:41.86:807,42,0	1/1:13,23:33:10.54:106,11,0	1/1:81,3:72:41.15:1019,41,0	0/1:40,0:34:38.40:201,0,38	0/1:38,0:37:99:144,0,139	0/1:49,0:34:83.10:86,0,83	0/0:16,0:16:41.48:0,41,1454	0/1:46,0:44:99:427,0,302	0/1:25,0:23:84.39:162,0,84	0/1:16,0:14:4.49:99,0,4
chr10	12705823	.	ACACACACACT	A	10871.29	PASS	AB=0.990;AC=36;AF=0.643;AN=56;BaseQRankSum=4.804;DP=1112;FS=0.000;HRun=0;HaplotypeScore=380.6125;InbreedingCoeff=0.2270;MQ=42.54;MQ0=34;MQRankSum=-0.655;QD=11.97;ReadPosRankSum=0.188;VQSLOD=2.1686;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,100,2756	1/1:13,1:13:17.92:151,18,0	0/0:41,0:11:22.76:0,23,274	0/0:44,0:10:26.84:0,27,300	0/1:33,0:29:24.42:152,0,24	0/1:36,0:27:3.01:228,0,3	0/0:60,0:50:4.99:0,5,165	0/1:38,0:23:99:368,0,135	1/1:50,0:43:43.65:586,44,0	0/1:51,2:47:18.01:1096,0,18	1/1:36,1:36:15.51:388,16,0	1/1:41,0:38:60.67:691,61,0	1/1:39,0:30:24.74:643,25,0	1/1:50,0:41:38.33:672,38,0	1/1:47,0:43:73.91:824,74,0	1/1:38,0:33:56.78:528,57,0	0/1:39,0:32:23.33:342,0,23	0/1:20,0:14:26.33:217,0,26	1/1:32,0:17:43.37:526,43,0	1/1:36,0:33:11.10:77,11,0	1/1:86,0:74:62.02:724,62,0	1/1:40,1:35:51.40:488,51,0	0/1:38,0:37:63.58:186,0,64	0/1:47,1:36:14.77:176,0,15	0/0:16,0:16:41.26:0,41,1240	0/1:43,2:44:93.99:1034,0,94	1/1:25,1:24:27.92:497,28,0	0/1:17,0:15:5.87:274,0,6
chr10	12705825	.	ACACACACT	A	16611.85	PASS	AB=0.992;AC=46;AF=0.821;AN=56;BaseQRankSum=2.408;DP=1101;FS=3.156;HRun=0;HaplotypeScore=340.2869;InbreedingCoeff=0.7222;MQ=43.27;MQ0=34;MQRankSum=-1.462;QD=17.49;ReadPosRankSum=-0.530;VQSLOD=3.1908;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,99,2558	1/1:12,2:13:20.93:264,21,0	0/0:45,0:14:21.81:0,22,207	0/0:45,0:11:25.42:0,25,241	1/1:29,3:28:35.94:410,36,0	1/1:35,0:26:10.49:368,10,0	0/1:55,1:48:22.12:22,0,114	0/1:38,0:23:99:349,0,147	1/1:34,12:40:69.43:926,69,0	1/1:47,7:48:91.49:1822,91,0	1/1:29,5:33:56.65:679,57,0	1/1:33,6:36:67.93:855,68,0	1/1:32,6:30:71.72:1030,72,0	1/1:45,7:43:86.29:1229,86,0	1/1:39,6:42:86.83:1227,87,0	1/1:27,10:33:68.61:989,69,0	1/1:36,3:33:49.94:531,50,0	1/1:18,2:14:12.66:400,13,0	1/1:31,0:17:27.56:443,28,0	1/1:35,0:32:11:74,11,0	1/1:86,0:73:55.26:550,55,0	1/1:39,3:36:59.65:710,60,0	1/1:35,2:36:27.56:373,28,0	1/1:49,0:36:32.03:286,32,0	0/0:18,0:18:44.33:0,44,1229	1/1:31,8:39:16.15:1548,16,0	1/1:19,7:24:57.77:943,58,0	1/1:12,4:15:9.82:583,10,0
chr10	12705826	.	C	CT	1659.94	PASS	AB=0.856;AC=16;AF=0.286;AN=56;BaseQRankSum=-0.241;DP=1116;FS=47.610;HRun=0;HaplotypeScore=329.1578;InbreedingCoeff=-0.3987;MQ=43.09;MQ0=33;MQRankSum=-2.285;QD=2.64;ReadPosRankSum=-4.375;VQSLOD=1.0029;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,100,1337	0/0:13,3:15:15.05:0,15,192	0/0:46,0:14:27.54:0,28,366	0/0:46,0:11:21.38:0,21,327	0/1:25,8:29:99:121,0,256	0/0:29,6:26:33.35:0,33,429	0/0:51,7:48:14.07:0,14,150	0/0:37,2:23:64.27:0,64,800	0/1:42,7:41:99:117,0,525	0/1:44,12:49:99:395,0,717	0/0:26,7:32:41.93:0,42,567	0/1:26,13:36:89.17:89,0,422	0/1:31,10:32:99:159,0,400	0/1:41,10:42:55.86:56,0,692	0/1:36,12:41:99:166,0,540	0/1:31,8:34:99:101,0,482	0/1:35,4:31:41.03:41,0,485	0/1:16,2:13:24.24:24,0,198	0/0:27,3:16:43.25:0,43,466	0/1:33,3:33:36.06:40,0,36	0/0:82,2:72:76.45:0,76,939	0/1:34,8:36:45.64:46,0,465	0/0:33,6:39:37.80:0,38,499	0/1:42,7:37:21.53:22,0,289	0/0:18,0:18:48.14:0,48,649	0/1:38,2:39:99:236,0,689	0/1:22,3:26:99:197,0,256	0/1:15,1:16:9.42:9,0,180
chr10	12705827	.	ACACACT	A	12922.92	PASS	AB=1.000;AC=47;AF=0.839;AN=56;BaseQRankSum=4.999;DP=1106;FS=0.425;HRun=0;HaplotypeScore=339.2556;InbreedingCoeff=0.7767;MQ=44.01;MQ0=30;MQRankSum=-0.717;QD=13.57;ReadPosRankSum=-0.878;VQSLOD=3.0473;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,102,2232	1/1:17,0:16:29.88:266,30,0	0/0:46,0:14:21.81:0,22,191	0/0:47,0:12:22.63:0,23,203	1/1:32,0:28:41.09:327,41,0	1/1:26,8:26:39.62:522,40,0	1/1:24,33:48:5.99:103,6,0	0/1:36,0:23:99:341,0,125	1/1:49,1:42:71.59:665,72,0	1/1:55,0:48:99:1311,116,0	1/1:33,0:32:56.32:490,56,0	1/1:38,0:35:73.50:662,73,0	1/1:40,1:32:70.83:709,71,0	1/1:51,0:42:82.66:811,83,0	1/1:48,0:41:94.25:861,94,0	1/1:40,0:35:74.15:733,74,0	1/1:39,0:31:55.04:436,55,0	1/1:18,0:12:2.43:208,2,0	1/1:31,0:17:17.96:380,18,0	1/1:36,0:33:14.39:94,14,0	1/1:83,0:71:6.81:365,7,0	1/1:39,1:34:61.68:507,62,0	1/1:32,7:38:59.64:627,60,0	1/1:43,5:36:34.80:386,35,0	0/0:18,0:18:44.34:0,44,1174	1/1:39,0:37:60.41:1043,60,0	1/1:28,0:26:60.55:651,61,0	1/1:18,0:16:33.23:426,33,0
chr10	12705832	.	CTCT	C	283.60	PASS	AB=0.970;AC=10;AF=0.179;AN=56;BaseQRankSum=6.466;DP=1067;FS=51.794;HRun=0;HaplotypeScore=335.6929;InbreedingCoeff=-0.0459;MQ=47.38;MQ0=29;MQRankSum=-5.527;QD=0.84;ReadPosRankSum=-0.405;VQSLOD=0.5901;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,100,2284	0/0:16,0:15:35.81:0,36,289	0/0:51,0:15:39.32:0,39,680	0/0:57,0:21:42.83:0,43,912	0/0:28,1:25:0.62:0,1,281	0/0:32,1:26:40.42:0,40,333	1/1:53,2:45:4.98:21,5,0	0/0:34,0:23:62.58:0,63,587	0/1:44,1:38:16.37:16,0,432	0/1:50,0:46:99:109,0,413	0/0:30,0:29:56.15:0,56,465	0/1:35,0:32:12.43:12,0,399	0/1:36,1:29:56.79:57,0,297	0/0:52,0:43:36.25:0,36,637	0/0:43,0:37:11.41:0,11,522	0/0:38,1:34:49.81:0,50,442	0/1:37,0:30:54.07:54,0,322	0/0:18,0:12:23.01:0,23,213	0/0:31,0:19:12.98:0,13,276	0/0:35,0:32:11.42:0,11,108	0/0:74,0:64:53.54:0,54,631	0/0:40,2:36:52.45:0,52,566	0/0:36,2:37:56.20:0,56,424	0/0:46,1:36:28.30:0,28,321	0/0:17,0:17:14.95:0,15,913	0/1:34,1:33:64.33:64,0,316	0/1:26,1:25:12.17:12,0,215	0/1:14,0:16:79.71:80,0,121
chr10	12705936	.	CAA	C	1051.77	PASS	AB=0.820;AC=6;AF=0.107;AN=56;BaseQRankSum=13.099;DP=1315;FS=88.589;HRun=3;HaplotypeScore=334.7618;InbreedingCoeff=-0.1318;MQ=56.46;MQ0=6;MQRankSum=-10.613;QD=3.70;ReadPosRankSum=0.706;VQSLOD=-0.1709;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,138,2289	0/0:19,3:20:11.57:0,12,895	0/0:52,0:36:96.37:0,96,1667	0/0:62,0:45:84.44:0,84,1269	0/0:39,7:43:99:0,99,1860	0/1:22,15:32:99:211,0,656	0/0:35,9:40:43.22:0,43,1460	0/1:36,7:40:99:196,0,1245	0/0:56,13:63:99:0,125,2664	0/1:39,9:44:99:131,0,1607	0/0:21,7:24:48.08:0,48,793	0/0:54,12:59:85.82:0,86,2308	0/0:37,8:43:36.69:0,37,1805	0/0:28,8:34:81.09:0,81,1413	0/0:37,7:39:80.71:0,81,1912	0/0:34,11:42:0.79:0,1,1378	0/0:51,1:52:99:0,113,2306	0/0:22,0:21:43.73:0,44,973	0/1:38,5:39:22.90:23,0,1500	0/1:39,23:59:99:583,0,1474	0/0:111,3:113:99:0,224,4425	0/0:44,6:46:99:0,114,2057	0/0:28,5:32:50.14:0,50,1223	0/0:62,5:65:99:0,157,2713	0/0:23,0:22:63.16:0,63,1086	0/1:44,7:50:32.13:32,0,2083	0/0:29,8:30:21.79:0,22,1306	0/0:21,1:20:27.75:0,28,1009
chr10	12706123	.	CTGCCCCTGTATG	C	2873.92	PASS	AB=0.714;AC=2;AF=0.036;AN=56;BaseQRankSum=8.655;DP=1253;FS=3.465;HRun=0;HaplotypeScore=475.2586;InbreedingCoeff=-0.0370;MQ=62.85;MQ0=4;MQRankSum=-7.134;QD=33.81;ReadPosRankSum=0.774;VQSLOD=1.4964;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:69.19:0,69,3671	0/0:26,0:26:78.23:0,78,3763	0/0:26,0:26:69.06:0,69,2967	0/0:20,0:20:36.78:0,37,1925	0/0:42,0:42:99:0,111,6385	0/1:25,17:41:99:1697,0,3670	0/1:26,17:43:99:1265,0,3515	0/0:56,0:51:99:0,126,6735	0/0:70,0:69:99:0,190,10397	0/0:63,0:61:99:0,175,9835	0/0:63,0:60:99:0,163,9434	0/0:56,0:56:99:0,163,9210	0/0:32,0:31:93.32:0,93,5179	0/0:34,0:34:93.32:0,93,5331	0/0:48,0:48:99:0,135,7811	0/0:48,0:48:99:0,132,7610	0/0:46,0:46:99:0,135,7682	0/0:23,0:23:69.24:0,69,4006	0/0:45,0:45:99:0,129,7205	0/0:60,0:59:99:0,157,8719	0/0:57,0:57:99:0,160,9006	0/0:75,0:70:99:0,187,10194	0/0:56,0:55:99:0,144,7878	0/0:65,0:65:99:0,178,10207	0/0:22,0:22:66.22:0,66,3355	0/0:46,0:46:99:0,135,8073	0/0:47,0:46:99:0,120,6641	0/0:17,0:17:51.18:0,51,2999
chr10	12708173	.	TC	T	13506.14	PASS	AB=0.686;AC=24;AF=0.429;AN=56;BaseQRankSum=25.552;DP=1036;FS=1.290;HRun=1;HaplotypeScore=153.7501;InbreedingCoeff=-0.7500;MQ=60.40;MQ0=12;MQRankSum=0.618;QD=14.04;ReadPosRankSum=2.050;VQSLOD=4.5714;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:51.16:0,51,771	0/1:10,5:14:99:129,0,383	0/0:20,0:15:41.58:0,42,542	0/0:18,0:13:39.07:0,39,549	0/1:34,43:76:99:1357,0,1333	0/1:25,23:46:99:588,0,1000	0/1:15,15:30:99:383,0,580	0/1:28,19:47:99:578,0,1151	0/1:21,14:34:99:442,0,838	0/1:31,27:56:99:899,0,1240	0/1:23,26:47:99:798,0,743	0/1:12,15:24:99:394,0,425	0/1:26,13:38:99:350,0,1086	0/1:22,14:36:99:478,0,879	0/1:14,21:35:99:737,0,511	0/1:27,15:42:99:481,0,1095	0/1:17,23:36:99:652,0,641	0/1:7,12:19:99:368,0,276	0/1:22,11:32:99:269,0,917	0/1:32,34:66:99:1083,0,1276	0/1:23,9:32:99:164,0,967	0/1:26,23:49:99:700,0,1081	0/1:20,26:46:99:873,0,806	0/1:19,13:30:99:371,0,801	0/0:19,0:19:57.17:0,57,866	0/1:24,18:40:99:595,0,896	0/1:36,16:52:99:436,0,1487	0/1:3,10:13:99:380,0,102
chr10	12708842	.	TC	T	549.75	PASS	AB=0.700;AC=2;AF=0.038;AN=52;BaseQRankSum=3.933;DP=1116;FS=4.039;HRun=6;HaplotypeScore=104.5286;InbreedingCoeff=-0.0402;MQ=42.46;MQ0=111;MQRankSum=-1.789;QD=6.25;ReadPosRankSum=1.802;VQSLOD=0.1484;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:46:75.24:0,75,980	0/0:23,0:22:63.20:0,63,826	./.	./.	0/0:55,0:53:84.27:0,84,1101	0/1:28,16:39:99:250,0,480	0/1:22,22:37:99:388,0,196	0/0:48,0:17:45.13:0,45,575	0/0:43,0:42:75.04:0,75,986	0/0:42,0:38:99:0,108,1421	0/0:38,0:35:57.18:0,57,748	0/0:37,0:35:54.03:0,54,695	0/0:28,0:26:54.18:0,54,708	0/0:25,0:25:50.99:0,51,657	0/0:39,0:39:66.21:0,66,868	0/0:26,0:26:60.16:0,60,759	0/0:48,0:39:57.17:0,57,735	0/0:27,0:21:21.07:0,21,276	0/0:41,0:28:72.23:0,72,934	0/0:57,0:52:99:0,123,1590	0/0:54,0:38:36.01:0,36,404	0/0:56,0:55:99:0,105,1359	0/0:42,0:41:78.25:0,78,1025	0/0:45,0:39:54.18:0,54,710	0/0:20,0:20:42.02:0,42,540	0/0:54,0:53:99:0,144,1861	0/0:51,0:48:96.31:0,96,1262	0/0:21,0:17:33.06:0,33,400
chr10	12709331	.	CT	C	2604.18	PASS	AB=0.681;AC=5;AF=0.089;AN=56;BaseQRankSum=-5.387;DP=948;FS=3.754;HRun=3;HaplotypeScore=190.0171;InbreedingCoeff=0.3311;MQ=45.42;MQ0=45;MQRankSum=7.729;QD=15.05;ReadPosRankSum=-2.782;VQSLOD=2.1792;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:81.19:0,81,1119	0/0:11,0:10:27:0,27,342	0/0:10,0:8:18.06:0,18,259	0/0:13,0:10:30.06:0,30,386	0/0:42,0:41:99:0,99,1400	0/0:58,0:47:99:0,126,1704	0/0:18,0:17:51.15:0,51,714	0/1:33,29:56:99:847,0,809	0/0:48,0:45:99:0,105,1465	0/0:32,0:30:90.27:0,90,1272	0/0:27,0:24:51.17:0,51,733	0/0:36,0:32:83.99:0,84,1163	0/0:42,0:38:96.20:0,96,1304	0/0:40,0:36:87.19:0,87,1169	0/0:40,0:37:99:0,102,1449	0/0:38,0:35:99:0,102,1399	0/0:18,0:16:45.05:0,45,600	0/0:19,0:16:48.16:0,48,691	0/1:21,21:36:99:571,0,583	0/1:14,11:23:99:203,0,414	1/1:12,32:38:16.09:1104,16,0	0/0:36,0:34:84.11:0,84,1114	0/0:25,0:22:51.13:0,51,711	0/0:44,0:41:93.27:0,93,1315	0/0:14,0:14:36.12:0,36,518	0/0:57,0:52:99:0,144,1971	0/0:62,0:57:99:0,150,2110	0/0:18,0:18:51.15:0,51,715
chr10	12709524	.	T	TA	4340.99	PASS	AB=0.731;AC=23;AF=0.411;AN=56;BaseQRankSum=16.750;DP=701;FS=84.386;HRun=5;HaplotypeScore=102.5064;InbreedingCoeff=-0.7327;MQ=51.10;MQ0=24;MQRankSum=-4.011;QD=7.08;ReadPosRankSum=-2.550;VQSLOD=-0.4969;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:45.07:0,45,465	0/1:10,3:13:85.21:85,0,225	0/0:10,0:5:6.01:0,6,64	0/0:10,0:5:9.02:0,9,97	0/1:27,13:40:99:328,0,667	0/0:31,8:36:2.27:0,2,727	0/1:4,9:11:96.92:134,0,97	0/1:28,11:37:99:341,0,551	0/1:13,11:24:99:149,0,307	0/1:26,10:36:99:295,0,610	0/1:26,10:36:85.59:86,0,570	0/1:6,7:11:94.36:94,0,137	0/1:15,11:25:99:142,0,366	0/1:13,10:23:99:262,0,268	0/1:15,10:23:73.21:73,0,342	0/1:7,8:14:99:204,0,128	0/1:8,5:12:99:124,0,193	0/1:8,11:16:99:197,0,187	0/1:12,9:18:99:262,0,268	0/1:38,8:46:99:183,0,1021	0/1:18,4:21:24.79:25,0,462	0/1:18,14:29:99:204,0,467	0/1:32,8:39:99:110,0,686	0/1:3,1:4:27.42:27,0,85	0/0:12,0:11:27.06:0,27,290	0/1:28,9:33:99:153,0,609	0/1:30,18:47:99:526,0,474	0/1:9,19:26:99:337,0,233
chr10	12709602	.	GATA	G	7625.88	PASS	AB=0.681;AC=41;AF=0.732;AN=56;BaseQRankSum=-3.637;DP=367;FS=0.000;HRun=0;HaplotypeScore=77.1732;InbreedingCoeff=0.1975;MQ=59.19;MQ0=7;MQRankSum=2.078;QD=23.04;ReadPosRankSum=3.320;VQSLOD=4.6675;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:36.11:0,36,721	1/1:1,6:7:18.06:271,18,0	0/0:6,0:4:2.02:0,2,7	0/0:5,0:4:0.67:0,1,30	1/1:9,13:22:15.08:532,15,0	1/1:4,15:18:17.60:435,18,0	1/1:3,1:2:3.01:45,3,0	1/1:12,13:22:17.15:471,17,0	1/1:8,5:10:24.07:341,24,0	0/1:10,4:13:7.94:230,0,8	0/1:10,7:17:52.26:394,0,52	1/1:6,3:7:12.03:160,12,0	1/1:6,5:10:30.07:406,30,0	0/1:3,3:6:5.81:188,0,6	1/1:4,5:9:18.05:250,18,0	1/1:1,8:9:24.08:361,24,0	0/1:7,9:15:45.89:328,0,46	0/1:3,6:9:25.94:163,0,26	1/1:7,12:18:0.96:406,1,0	1/1:10,10:20:19.65:504,20,0	1/1:2,7:9:12.04:181,12,0	1/1:8,2:9:9.02:115,9,0	1/1:10,2:12:17.94:197,18,0	1/1:0,2:2:6.02:90,6,0	0/0:10,0:10:24.08:0,24,478	1/1:10,11:19:19.39:588,19,0	0/1:14,13:26:18.95:591,0,19	0/1:12,9:20:99:381,0,153
chr10	12709684	.	GA	G	7816.26	PASS	AB=0.565;AC=35;AF=0.625;AN=56;BaseQRankSum=8.167;DP=420;FS=4.581;HRun=3;HaplotypeScore=48.4966;InbreedingCoeff=0.8855;MQ=58.71;MQ0=34;MQRankSum=2.653;QD=31.64;ReadPosRankSum=5.751;VQSLOD=4.4291;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:39.10:0,39,520	1/1:0,7:7:21.07:259,21,0	0/0:13,0:7:17.89:0,18,203	0/0:20,0:10:27.09:0,27,376	1/1:2,21:23:60.19:743,60,0	0/0:26,0:23:63.13:0,63,858	0/0:12,0:11:33.11:0,33,471	0/0:26,0:19:51.17:0,51,727	1/1:1,18:18:54.17:670,54,0	1/1:2,13:15:42.13:514,42,0	1/1:2,17:19:45.13:546,45,0	1/1:1,13:13:39.12:483,39,0	0/1:3,10:11:9.03:339,0,9	1/1:0,9:9:27.08:335,27,0	1/1:2,7:8:24.08:297,24,0	1/1:2,10:10:30.09:372,30,0	1/1:1,16:17:42.13:520,42,0	1/1:2,3:3:9.03:112,9,0	0/0:14,0:12:36.11:0,36,493	0/0:20,0:19:54.18:0,54,761	0/0:16,0:16:48.16:0,48,683	1/1:1,7:8:21.07:260,21,0	1/1:0,20:19:51.16:632,51,0	1/1:0,7:7:18.06:223,18,0	0/0:13,0:13:33.11:0,33,468	1/1:4,16:17:8.42:552,8,0	1/1:1,26:27:38.14:923,38,0	1/1:2,1:3:3.01:37,3,0
chr10	12709874	.	CT	C	4404.09	PASS	AB=0.571;AC=39;AF=0.696;AN=56;BaseQRankSum=-1.981;DP=436;FS=11.206;HRun=11;HaplotypeScore=53.7212;InbreedingCoeff=0.8767;MQ=55.76;MQ0=11;MQRankSum=-1.917;QD=15.29;ReadPosRankSum=5.559;VQSLOD=4.3223;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:57.09:0,57,587	1/1:3,2:5:5.98:49,6,0	0/0:9,0:5:12.92:0,13,129	0/0:10,0:7:18.04:0,18,184	1/1:1,18:20:37.92:296,38,0	1/1:1,11:12:29.97:246,30,0	1/1:2,4:6:8.99:74,9,0	0/0:10,0:22:45.79:0,46,273	1/1:3,22:25:41.95:345,42,0	1/1:8,13:20:38.94:320,39,0	1/1:3,8:11:14.98:123,15,0	1/1:4,12:15:26.96:222,27,0	1/1:3,12:14:32.96:271,33,0	1/1:4,10:14:23.97:197,24,0	1/1:2,10:13:26:203,26,0	1/1:4,13:18:37.99:301,38,0	0/1:3,9:12:10.87:124,0,11	1/1:3,12:15:12.26:226,12,0	0/0:6,0:8:17.08:0,17,86	0/0:6,0:20:40.22:0,40,234	0/0:5,0:21:28.73:0,29,170	1/1:2,10:12:14.95:122,15,0	1/1:2,9:11:17.97:148,18,0	1/1:0,8:8:23.97:197,24,0	0/0:23,0:23:45.09:0,45,467	1/1:5,9:12:26.64:208,27,0	1/1:4,22:26:28.26:436,28,0	1/1:1,13:13:35.96:296,36,0
chr10	12711119	.	CT	C	174.18	PASS	AC=8;AF=0.571;AN=14;BaseQRankSum=1.437;DP=277;FS=5.643;HRun=2;HaplotypeScore=16.4978;MQ=10.91;MQ0=201;MQRankSum=-0.568;QD=4.58;ReadPosRankSum=-0.367;VQSLOD=0.3890;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:10:18.02:0,18,234	1/1:4,1:1:3.01:39,3,0	./.	./.	./.	./.	./.	./.	./.	0/0:11,0:1:3.01:0,3,45	1/1:15,2:2:3.01:39,3,0	./.	./.	./.	./.	./.	./.	./.	./.	1/1:3,4:4:6.02:78,6,0	./.	./.	1/1:6,3:3:9.03:110,9,0	./.	0/0:28,0:14:27.01:0,27,353	./.	./.	./.
chr10	12711862	.	GT	G	858.84	PASS	AC=20;AF=0.833;AN=24;BaseQRankSum=4.690;DP=153;FS=22.059;HRun=6;HaplotypeScore=21.8120;InbreedingCoeff=0.6801;MQ=18.76;MQ0=51;MQRankSum=-2.839;QD=14.31;ReadPosRankSum=1.169;VQSLOD=1.2785;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:5:12.04:0,12,158	./.	./.	./.	./.	1/1:4,5:5:12.03:128,12,0	./.	./.	1/1:1,2:2:6.02:64,6,0	./.	1/1:0,3:3:6.02:64,6,0	1/1:1,2:3:6.01:64,6,0	1/1:2,5:5:15.04:160,15,0	1/1:7,3:5:9.02:96,9,0	1/1:4,0:1:0.89:2,1,0	1/1:0,4:4:12.03:128,12,0	./.	./.	./.	1/1:0,5:5:15.04:161,15,0	./.	./.	./.	./.	0/0:19,0:9:18.06:0,18,230	./.	1/1:7,4:4:9.02:96,9,0	./.
chr10	12712350	.	C	CT	5015.68	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=4.697;DP=248;FS=13.942;HRun=8;HaplotypeScore=44.1337;InbreedingCoeff=0.6658;MQ=39.84;MQ0=12;MQRankSum=-5.393;QD=25.59;ReadPosRankSum=1.470;VQSLOD=4.2663;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:21.64:0,22,338	1/1:1,7:7:18.05:208,18,0	0/0:10,0:4:6:0,6,55	0/0:9,0:4:6:0,6,55	1/1:1,13:14:36.10:411,36,0	1/1:1,10:11:30.09:346,30,0	1/1:2,7:7:18.05:208,18,0	1/1:5,9:13:2.58:269,3,0	1/1:0,13:13:36.11:413,36,0	1/1:1,6:7:18.04:199,18,0	1/1:0,8:8:21.06:239,21,0	1/1:1,3:4:6.02:69,6,0	1/1:0,3:3:9.03:104,9,0	1/1:2,3:5:6.02:66,6,0	1/1:0,7:7:18.05:208,18,0	1/1:0,2:2:6.02:69,6,0	1/1:4,4:8:5.11:98,5,0	1/1:1,1:1:3.01:35,3,0	1/1:6,9:11:24.07:276,24,0	1/1:2,7:8:18.05:208,18,0	1/1:1,7:8:18.05:208,18,0	1/1:1,6:7:18.05:208,18,0	1/1:3,10:12:30.09:346,30,0	1/1:1,1:2:3.01:35,3,0	0/0:8,0:8:18.01:0,18,165	1/1:2,10:12:30.09:346,30,0	1/1:1,11:12:33.10:381,33,0	1/1:0,2:2:6.02:69,6,0
chr10	12719574	.	A	AT	516.31	PASS	AB=0.972;AC=21;AF=0.525;AN=40;BaseQRankSum=1.834;DP=287;FS=1.172;HRun=1;HaplotypeScore=29.1538;InbreedingCoeff=0.2767;MQ=38.07;MQ0=109;MQRankSum=-2.766;QD=3.33;ReadPosRankSum=-0.367;VQSLOD=-0.3485;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:44,1:37:20.91:21,0,248	0/0:7,0:4:6.02:0,6,78	0/0:22,2:1:3.01:0,3,39	0/1:31,1:5:32.89:33,0,100	0/0:17,0:8:9.03:0,9,117	1/1:5,2:2:3.01:45,3,0	1/1:1,1:1:3.01:45,3,0	./.	./.	0/0:8,0:2:6.02:0,6,78	0/0:14,1:7:3.01:0,3,39	1/1:1,2:2:3.01:45,3,0	1/1:1,1:1:3.01:45,3,0	1/1:1,1:1:3.01:45,3,0	1/1:5,1:1:3.01:45,3,0	1/1:4,4:4:12.04:179,12,0	0/0:7,0:1:3.01:0,3,39	1/1:8,2:2:6.02:90,6,0	./.	./.	./.	0/0:13,1:7:12.04:0,12,155	0/0:13,0:9:9.03:0,9,117	./.	0/1:28,1:20:14.79:15,0,307	1/1:8,1:1:3.01:45,3,0	./.	./.
chr10	12719672	.	C	CT	569.03	PASS	AB=0.857;AC=19;AF=0.864;AN=22;BaseQRankSum=1.880;DP=177;FS=7.706;HRun=3;HaplotypeScore=22.9199;InbreedingCoeff=0.1427;MQ=22.88;MQ0=65;MQRankSum=-4.001;QD=8.01;ReadPosRankSum=0.634;VQSLOD=0.1634;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:38,1:31:66.97:0,67,786	./.	./.	./.	./.	1/1:1,4:2:3.01:43,3,0	1/1:2,1:2:3.01:43,3,0	./.	./.	1/1:5,11:5:15.05:216,15,0	1/1:5,3:1:3.01:43,3,0	./.	1/1:2,2:2:6.02:86,6,0	./.	./.	./.	1/1:2,1:1:3.01:43,3,0	1/1:1,2:1:3.01:43,3,0	./.	./.	./.	./.	1/1:4,1:1:3.01:43,3,0	1/1:4,2:2:3.01:43,3,0	0/1:15,3:12:59.12:59,0,210	./.	./.	./.
chr10	12722453	.	T	TA	12941.77	PASS	AB=0.691;AC=24;AF=0.429;AN=56;BaseQRankSum=7.543;DP=937;FS=8.362;HRun=3;HaplotypeScore=105.1312;InbreedingCoeff=-0.7501;MQ=77.41;MQ0=11;MQRankSum=-6.819;QD=15.41;ReadPosRankSum=4.233;VQSLOD=4.0029;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,108,1510	0/1:11,8:19:99:326,0,404	0/0:20,0:20:58.06:0,58,782	0/0:29,0:29:87.22:0,87,1173	0/1:15,21:35:99:747,0,527	0/1:23,20:40:99:695,0,842	0/1:17,14:30:99:536,0,565	0/1:33,25:54:99:896,0,1141	0/1:34,22:52:99:712,0,1154	0/1:27,22:47:99:869,0,908	0/1:14,17:31:99:588,0,462	0/1:13,12:23:99:365,0,479	0/1:18,14:31:99:443,0,628	0/1:16,11:27:99:410,0,476	0/1:19,12:29:99:395,0,671	0/1:19,18:26:99:312,0,599	0/1:20,18:38:99:705,0,687	0/1:13,6:19:99:233,0,447	0/1:16,11:27:99:440,0,509	0/1:17,12:28:99:358,0,557	0/1:26,20:44:99:551,0,955	0/1:20,18:37:99:613,0,734	0/1:17,12:29:99:445,0,583	0/1:16,14:30:99:491,0,587	0/0:10,0:10:30.10:0,30,419	0/1:19,18:33:99:552,0,658	0/1:30,23:50:99:811,0,1065	0/1:9,10:19:99:447,0,237
chr10	12722945	.	C	CCACACACACACACACACACA	7769.85	PASS	AB=0.688;AC=35;AF=0.729;AN=48;BaseQRankSum=2.188;DP=372;FS=9.581;HRun=0;HaplotypeScore=148.4133;InbreedingCoeff=0.5637;MQ=66.42;MQ0=30;MQRankSum=-7.164;QD=40.05;ReadPosRankSum=3.011;VQSLOD=3.1564;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:78.27:0,78,3769	./.	0/0:29,0:16:42.13:0,42,1544	0/0:44,0:28:54.65:0,55,1976	1/1:11,0:11:2.36:23,2,0	1/1:10,4:17:1.47:263,1,0	1/1:7,0:8:3.01:145,3,0	1/1:20,0:8:5.99:163,6,0	1/1:6,0:5:6.02:469,6,0	1/1:7,0:7:12.04:544,12,0	0/0:8,0:7:0.89:0,1,2	1/1:5,0:10:6.02:249,6,0	1/1:7,0:4:6:279,6,0	./.	1/1:10,0:9:2.82:17,3,0	1/1:4,0:6:6.02:539,6,0	1/1:6,0:5:6.02:544,6,0	1/1:2,0:1:3.01:259,3,0	1/1:4,0:7:20.94:922,21,0	0/0:10,5:10:0.47:0,0,1	./.	./.	0/1:6,0:7:0:1,0,0	1/1:7,0:5:0.47:1,0,0	0/0:9,0:9:21.07:0,21,1075	1/1:9,0:9:12.04:1060,12,0	1/1:13,3:13:17.37:1368,17,0	1/1:4,0:5:12.04:925,12,0
chr10	12722950	.	CAG	C	263.35	PASS	AB=0.893;AC=7;AF=0.146;AN=48;BaseQRankSum=0.200;DP=451;FS=10.029;HRun=0;HaplotypeScore=84.1848;InbreedingCoeff=0.3505;MQ=56.95;MQ0=36;MQRankSum=3.755;QD=2.53;ReadPosRankSum=2.436;VQSLOD=0.9528;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:21,18:40:1.84:190,0,2	0/0:8,0:6:2.99:0,3,24	0/0:31,0:16:3.01:0,3,45	0/0:43,0:25:0.47:0,0,1	0/1:20,0:17:0.01:1,0,0	0/0:20,0:18:5.44:0,5,27	0/1:16,0:9:0:0,0,0	0/0:23,0:7:11.91:0,12,96	0/0:16,0:11:8.92:0,9,67	0/0:15,0:14:10.68:0,11,77	1/1:18,0:15:0.47:1,0,0	0/0:16,0:15:2.99:0,3,24	./.	./.	0/0:13,0:8:2.99:0,3,24	0/0:8,0:7:2.60:0,3,10	0/0:12,0:9:5.59:0,6,34	0/0:2,0:1:3.01:0,3,37	0/0:19,0:15:32.77:0,33,257	./.	./.	0/0:14,0:13:3:0,3,25	0/0:16,0:12:5.99:0,6,48	0/0:7,0:5:0:0,0,0	1/1:2,8:10:15.04:168,15,0	0/0:11,0:7:14.36:0,14,124	0/0:23,0:18:15.14:0,15,82	0/0:6,0:4:3.48:0,3,36
chr10	12723461	.	T	TG	7904.81	PASS	AB=0.718;AC=18;AF=0.321;AN=56;BaseQRankSum=10.233;DP=1161;FS=15.566;HRun=1;HaplotypeScore=191.0427;InbreedingCoeff=-0.4743;MQ=52.55;MQ0=58;MQRankSum=-2.477;QD=11.01;ReadPosRankSum=1.573;VQSLOD=1.6764;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:44:99:0,108,1367	0/1:10,6:13:47.12:47,0,317	0/0:13,0:6:18.02:0,18,214	0/0:28,0:15:45.12:0,45,547	0/1:16,12:24:99:212,0,449	0/0:35,0:35:87.25:0,87,1095	0/0:57,0:55:99:0,141,1763	0/0:45,0:35:93.28:0,93,1178	0/1:24,17:36:99:443,0,679	0/1:24,16:37:99:530,0,640	0/1:23,12:32:99:236,0,660	0/1:20,16:32:99:526,0,461	0/1:23,14:37:99:535,0,569	0/1:26,32:53:99:985,0,679	0/1:24,14:36:99:443,0,682	0/1:20,12:30:99:338,0,440	0/1:44,30:69:99:916,0,1006	0/1:25,16:39:99:350,0,796	0/0:47,0:39:99:0,108,1398	0/0:41,0:35:75.20:0,75,950	0/0:119,0:116:99:0,277,3532	0/1:22,19:35:99:359,0,687	0/1:19,14:30:99:365,0,617	0/1:31,24:54:99:546,0,844	0/0:12,0:12:30.10:0,30,390	0/1:31,13:40:99:341,0,850	0/1:39,22:55:99:658,0,1096	0/1:6,2:7:74.88:75,0,102
chr10	12723903	.	C	CAAA	4646.55	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=0.018;DP=345;FS=1.541;HRun=12;HaplotypeScore=57.9614;InbreedingCoeff=0.7711;MQ=54.91;MQ0=17;MQRankSum=-4.168;QD=17.02;ReadPosRankSum=-1.832;VQSLOD=2.4940;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:27:51.29:0,51,552	1/1:3,2:5:6.02:94,6,0	0/0:11,0:8:18.37:0,18,156	0/0:9,0:6:13.23:0,13,88	1/1:6,6:15:8.13:333,8,0	1/1:11,0:12:14.35:47,14,0	1/1:11,0:11:15.25:47,15,0	1/1:13,0:11:14.53:163,15,0	1/1:6,1:8:17.99:190,18,0	1/1:4,10:15:33.07:531,33,0	1/1:2,7:7:15.05:250,15,0	1/1:6,1:7:14.70:186,15,0	1/1:3,5:9:14.88:198,15,0	1/1:6,3:9:21:283,21,0	1/1:2,1:8:6.49:87,6,0	1/1:3,0:4:2.99:23,3,0	1/1:8,8:17:25.36:349,25,0	1/1:7,3:7:6.02:94,6,0	1/1:18,0:17:24.20:211,24,0	1/1:18,0:14:20.98:226,21,0	1/1:4,0:4:6.02:77,6,0	1/1:5,7:8:9.03:134,9,0	1/1:2,7:10:15.01:210,15,0	1/1:2,5:9:15.03:243,15,0	0/0:17,0:18:44.96:0,45,473	1/1:10,3:11:11.99:185,12,0	1/1:5,6:12:21.02:320,21,0	1/1:5,1:6:12.02:163,12,0
chr10	12723914	.	A	AAG	1816.45	PASS	AB=1.000;AC=27;AF=0.482;AN=56;BaseQRankSum=1.758;DP=372;FS=1.154;HRun=0;HaplotypeScore=68.1479;InbreedingCoeff=0.1242;MQ=57.60;MQ0=12;MQRankSum=-2.472;QD=7.41;ReadPosRankSum=2.870;VQSLOD=3.2035;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:28:68.09:0,68,732	0/0:4,0:3:0.47:0,0,1	0/0:19,0:12:13.76:0,14,226	0/0:8,0:6:10.85:0,11,135	0/1:27,0:22:30.82:31,0,216	1/1:1,11:12:21.07:336,21,0	1/1:1,14:15:24.08:385,24,0	1/1:0,0:15:32.61:314,33,0	0/1:9,0:9:22:22,0,58	0/1:16,0:15:12.64:13,0,61	0/1:11,0:9:10.27:10,0,77	0/1:8,0:7:11.88:12,0,27	1/1:7,0:7:8.01:26,8,0	0/0:10,0:10:4.07:0,4,66	0/1:8,0:8:4.92:5,0,14	0/1:3,0:3:14.87:15,0,15	0/1:21,0:20:38.44:38,0,72	0/0:8,0:6:5.96:0,6,43	1/1:3,0:17:26.36:234,26,0	1/1:3,1:17:38.73:396,39,0	1/1:0,0:3:6.02:67,6,0	0/0:14,0:10:9.23:0,9,63	0/1:18,0:15:25.61:26,0,86	0/1:10,0:10:17.47:17,0,26	0/0:19,0:18:48.08:0,48,560	0/0:13,0:11:10.05:0,10,96	0/1:17,0:17:32.52:33,0,133	1/1:7,0:5:2.91:17,3,0
chr10	12724288	.	TG	T	266.73	PASS	AC=10;AF=0.556;AN=18;BaseQRankSum=4.913;DP=145;FS=23.167;HRun=1;HaplotypeScore=51.2772;MQ=86.97;MQ0=3;MQRankSum=-4.833;QD=14.82;ReadPosRankSum=2.119;VQSLOD=1.7160;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,144,2260	./.	0/0:22,0:20:60.20:0,60,959	0/0:23,0:21:63.21:0,63,967	./.	./.	./.	./.	./.	1/1:0,3:3:9.03:125,9,0	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	1/1:0,9:9:6.02:64,6,0	1/1:0,2:2:3.01:32,3,0	./.	0/0:20,0:19:45.14:0,45,694	1/1:0,2:2:6.02:83,6,0	./.	1/1:0,2:2:6.01:69,6,0
chr10	12724315	.	ACT	A	81.70	PASS	AC=6;AF=0.429;AN=14;BaseQRankSum=3.160;DP=114;FS=8.319;HRun=0;HaplotypeScore=60.5748;MQ=87.31;MQ0=0;MQRankSum=-2.899;QD=20.42;ReadPosRankSum=-0.218;VQSLOD=3.0493;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,144,2907	1/1:0,1:1:3.01:48,3,0	0/0:18,0:18:51.02:0,51,880	0/0:18,0:18:48.09:0,48,843	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	1/1:0,2:2:6.02:75,6,0	./.	1/1:0,1:1:3.01:48,3,0	./.	./.	0/0:21,0:20:48.16:0,48,971	./.	./.	./.
chr10	12727761	.	T	TAA	8492.22	PASS	AC=46;AF=0.852;AN=54;BaseQRankSum=-5.900;DP=380;FS=1.369;HRun=8;HaplotypeScore=43.5332;InbreedingCoeff=0.9075;MQ=57.45;MQ0=29;MQRankSum=-2.961;QD=26.62;ReadPosRankSum=3.090;VQSLOD=3.8887;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:22:57.14:0,57,633	1/1:0,8:8:24.08:381,24,0	0/0:10,0:8:19.20:0,19,179	0/0:11,0:10:26.88:0,27,248	1/1:2,9:11:18.03:259,18,0	1/1:1,0:17:41.74:142,42,0	1/1:4,0:9:9.85:34,10,0	1/1:4,8:11:24.05:335,24,0	1/1:3,13:15:24.08:381,24,0	1/1:1,9:8:24.08:381,24,0	1/1:2,16:18:42.14:666,42,0	1/1:1,7:7:12.04:190,12,0	1/1:5,8:9:18.06:285,18,0	1/1:4,17:20:42.14:666,42,0	1/1:2,9:11:25.84:388,26,0	1/1:1,8:7:18.06:286,18,0	1/1:8,8:10:22.32:336,22,0	1/1:2,6:7:7.80:175,8,0	1/1:5,6:9:18.03:259,18,0	1/1:7,23:32:61.18:919,61,0	./.	1/1:1,7:8:21.07:333,21,0	1/1:2,14:15:30.10:476,30,0	1/1:4,4:8:11.40:151,11,0	0/0:15,0:15:39.09:0,39,424	1/1:1,15:16:45.13:682,45,0	1/1:3,26:28:44.94:672,45,0	1/1:0,5:5:6.02:95,6,0
chr10	12728973	.	TA	T	5341.57	PASS	AB=0.738;AC=25;AF=0.446;AN=56;BaseQRankSum=19.905;DP=750;FS=39.999;HRun=6;HaplotypeScore=197.5288;InbreedingCoeff=-0.6681;MQ=51.81;MQ0=3;MQRankSum=-16.460;QD=7.91;ReadPosRankSum=1.094;VQSLOD=-0.3916;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:75.20:0,75,1099	0/1:11,8:19:99:203,0,340	0/0:17,0:13:32.76:0,33,380	0/0:9,0:6:9.03:0,9,118	0/1:30,16:46:99:395,0,781	1/1:6,16:22:6.45:437,6,0	0/1:4,5:7:7.90:85,0,8	0/1:26,9:33:99:109,0,771	0/1:24,13:34:99:263,0,659	0/1:29,17:44:99:377,0,849	0/1:38,16:54:99:280,0,1160	0/1:7,11:18:99:303,0,172	0/1:14,6:18:80.68:81,0,412	0/1:18,7:23:99:125,0,418	0/1:17,15:30:99:335,0,435	0/1:11,4:15:95.70:96,0,230	0/1:15,7:22:99:169,0,364	0/1:12,4:15:66.60:67,0,245	0/1:18,8:21:74.73:75,0,485	0/1:33,10:42:99:205,0,975	0/1:8,3:11:11.12:11,0,216	0/1:31,9:40:99:199,0,724	0/1:15,9:24:99:224,0,446	0/1:9,4:13:31.28:31,0,322	0/0:16,0:16:48.16:0,48,631	0/1:15,15:29:99:393,0,392	0/1:24,26:47:99:582,0,612	0/1:10,11:21:99:297,0,259
chr10	12728989	.	GA	G	5235.73	PASS	AB=0.723;AC=23;AF=0.411;AN=56;BaseQRankSum=19.378;DP=711;FS=22.929;HRun=7;HaplotypeScore=210.4031;InbreedingCoeff=-0.6767;MQ=56.87;MQ0=1;MQRankSum=-18.597;QD=8.35;ReadPosRankSum=-0.603;VQSLOD=0.5235;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:78.21:0,78,962	0/1:12,7:19:99:193,0,289	0/0:11,0:11:33.10:0,33,400	0/0:11,0:8:21.04:0,21,245	0/1:23,19:41:99:378,0,668	0/1:3,12:15:42.39:242,0,42	0/1:3,4:5:28.72:52,0,29	0/1:30,13:41:99:231,0,800	0/1:16,10:24:99:212,0,390	0/1:25,17:40:99:342,0,765	0/1:33,25:58:99:509,0,1017	0/1:8,9:17:99:230,0,181	0/1:15,4:17:73.83:74,0,405	0/1:13,5:17:99:111,0,298	0/1:21,12:32:99:252,0,545	0/1:7,5:12:99:117,0,228	0/1:12,5:17:86.22:86,0,250	0/0:13,0:13:24.06:0,24,289	0/1:20,7:22:43.68:44,0,426	0/1:32,11:42:99:225,0,870	0/1:5,1:6:12.52:13,0,170	0/1:27,11:37:99:240,0,684	0/1:17,16:33:99:344,0,444	0/1:10,2:12:2.60:3,0,276	0/0:18,0:18:48.15:0,48,604	0/1:15,19:32:99:438,0,296	0/1:20,24:41:99:509,0,426	0/1:7,15:22:99:392,0,198
chr10	12729014	.	A	AAT	32698.82	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-1.874;DP=731;FS=34.997;HRun=0;HaplotypeScore=134.9388;InbreedingCoeff=0.9876;MQ=58.80;MQ0=0;MQRankSum=-4.499;QD=49.62;ReadPosRankSum=1.547;VQSLOD=2.7997;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:87.17:0,87,1247	1/1:0,19:19:57.11:1052,57,0	0/0:15,0:14:33.07:0,33,424	0/0:10,0:7:11.25:0,11,219	1/1:0,42:43:99:2202,120,0	1/1:0,9:9:27.09:519,27,0	1/1:0,9:8:24.08:461,24,0	1/1:1,43:45:99:2205,129,0	1/1:3,16:20:57.17:1030,57,0	1/1:1,49:49:99:2701,147,0	1/1:0,54:56:99:2945,156,0	1/1:0,15:16:45.15:865,45,0	1/1:0,22:21:54.18:1039,54,0	1/1:0,25:25:63.22:1213,63,0	1/1:0,25:24:63.22:1207,63,0	1/1:0,12:12:36.12:693,36,0	1/1:0,17:17:42.14:807,42,0	1/1:0,12:12:24.08:462,24,0	1/1:1,24:25:67.04:1076,67,0	1/1:1,41:44:99:2319,123,0	1/1:1,13:14:33.11:637,33,0	1/1:0,32:33:87.21:1604,87,0	1/1:0,37:40:99:2005,105,0	1/1:1,9:10:24.08:462,24,0	0/0:18,0:18:54.18:0,54,808	1/1:1,34:34:99:1863,99,0	1/1:0,43:42:99:1894,99,0	1/1:0,25:25:75.26:1439,75,0
chr10	12729162	.	G	GA	2626.48	PASS	AB=0.692;AC=6;AF=0.107;AN=56;BaseQRankSum=-2.481;DP=813;FS=0.000;HRun=6;HaplotypeScore=107.1434;InbreedingCoeff=-0.1250;MQ=56.17;MQ0=9;MQRankSum=-0.608;QD=13.00;ReadPosRankSum=-2.811;VQSLOD=2.1737;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:66.08:0,66,654	0/0:6,0:6:18.04:0,18,184	0/0:18,0:7:20.94:0,21,186	0/0:11,0:4:6.01:0,6,61	0/0:48,0:47:99:0,120,1217	0/1:9,14:23:99:376,0,157	0/1:11,12:22:99:320,0,218	0/1:23,22:41:99:528,0,470	0/0:32,0:32:87.16:0,87,877	0/0:39,0:38:99:0,105,1056	0/0:44,0:42:99:0,107,1038	0/0:21,0:21:54.12:0,54,551	0/0:19,0:19:57.13:0,57,581	0/0:23,0:23:66.13:0,66,665	0/0:24,0:24:66.13:0,66,666	0/0:20,0:20:57.13:0,57,581	0/0:46,0:46:99:0,123,1216	0/0:34,0:34:99:0,102,1027	0/1:19,10:29:99:408,0,347	0/1:26,26:52:99:933,0,465	0/1:22,8:30:99:186,0,503	0/0:21,0:21:60.13:0,60,612	0/0:33,0:32:84.14:0,84,839	0/0:25,0:24:66.15:0,66,672	0/0:14,0:14:39.09:0,39,398	0/0:42,0:41:99:0,114,1153	0/0:50,0:49:99:0,132,1336	0/0:16,0:16:39.07:0,39,398
chr10	12729362	.	A	AGGTTTCAAGGTTT	8343.14	PASS	AB=0.862;AC=4;AF=0.071;AN=56;BaseQRankSum=-4.610;DP=864;FS=0.519;HRun=0;HaplotypeScore=333.2330;InbreedingCoeff=-0.0770;MQ=54.94;MQ0=4;MQRankSum=-9.622;QD=57.94;ReadPosRankSum=-1.300;VQSLOD=3.6897;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:57.19:0,57,2242	0/0:11,0:11:30.10:0,30,1253	0/0:25,0:13:33.11:0,33,1292	0/0:19,0:12:33.11:0,33,1324	0/0:53,0:53:99:0,160,6323	0/0:46,0:46:99:0,138,5501	0/0:25,0:25:75.24:0,75,2811	0/1:43,0:42:99:1856,0,2835	0/0:28,0:28:84.29:0,84,3357	0/0:44,0:44:99:0,132,5054	0/0:40,0:40:99:0,111,4433	0/0:19,0:19:57.15:0,57,2096	0/0:16,0:16:48.16:0,48,1982	0/0:21,0:21:60.21:0,60,2409	0/0:21,0:21:63.22:0,63,2533	0/0:15,0:15:45.15:0,45,1782	0/0:41,0:41:99:0,105,4070	0/0:38,0:38:99:0,108,4307	0/1:24,5:29:99:1485,0,2061	0/1:27,18:47:99:4202,0,2158	0/1:22,2:25:99:800,0,2024	0/0:29,0:29:87.30:0,87,3440	0/0:44,0:44:99:0,126,5035	0/0:31,0:31:84.29:0,84,3248	0/0:13,0:13:39.13:0,39,1636	0/0:31,0:31:93.32:0,93,3655	0/0:53,0:52:99:0,154,6381	0/0:34,0:34:96.33:0,96,3955
chr10	12729464	.	AATGGAG	A	13480.13	PASS	AB=0.744;AC=24;AF=0.429;AN=56;BaseQRankSum=18.136;DP=750;FS=10.067;HRun=0;HaplotypeScore=177.5393;InbreedingCoeff=-0.7500;MQ=53.40;MQ0=0;MQRankSum=-18.407;QD=20.15;ReadPosRankSum=2.087;VQSLOD=3.5596;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:39.13:0,39,1424	0/1:9,4:13:99:185,0,893	0/0:19,0:17:51.18:0,51,1763	0/0:28,0:27:80.48:0,80,2541	0/1:37,9:45:99:581,0,2922	0/1:20,19:39:99:1144,0,2065	0/1:18,5:23:99:213,0,1891	0/1:28,14:41:99:523,0,2873	0/1:16,14:30:99:879,0,1287	0/1:27,10:36:99:687,0,2280	0/1:22,14:35:99:699,0,2168	0/1:9,9:18:99:610,0,923	0/1:15,8:23:99:597,0,1325	0/1:11,7:18:99:465,0,967	0/1:18,9:27:99:583,0,1861	0/1:13,11:24:99:740,0,1227	0/1:21,8:29:99:439,0,1889	0/1:19,6:25:99:380,0,1544	0/1:23,5:24:99:229,0,1719	0/1:23,12:33:99:691,0,1777	0/1:14,9:23:99:278,0,1349	0/1:16,5:21:99:276,0,1534	0/1:14,16:29:99:666,0,1389	0/1:14,2:16:79.55:80,0,893	0/0:21,0:21:63.22:0,63,2274	0/1:15,12:27:99:778,0,1567	0/1:28,24:52:99:1483,0,2590	0/1:3,4:7:99:274,0,309
chr10	12729574	.	A	AT	9684.18	PASS	AB=0.708;AC=24;AF=0.429;AN=56;BaseQRankSum=22.888;DP=961;FS=0.000;HRun=1;HaplotypeScore=171.9737;InbreedingCoeff=-0.7500;MQ=59.95;MQ0=0;MQRankSum=-7.246;QD=10.91;ReadPosRankSum=1.200;VQSLOD=2.9061;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:58.03:0,58,757	0/1:6,6:12:80.51:81,0,207	0/0:19,0:19:45:0,45,531	0/0:17,0:17:42.23:0,42,452	0/1:36,26:62:99:669,0,1062	0/1:34,17:51:99:418,0,1138	0/1:11,7:18:99:211,0,264	0/1:34,24:58:99:631,0,949	0/1:21,12:33:99:335,0,655	0/1:26,24:48:99:570,0,658	0/1:27,21:48:99:553,0,840	0/1:18,11:29:99:304,0,470	0/1:10,13:23:99:288,0,314	0/1:16,13:29:99:387,0,498	0/1:16,12:28:99:349,0,539	0/1:12,10:22:99:260,0,389	0/1:30,16:45:99:523,0,677	0/1:14,9:23:99:249,0,411	0/1:29,10:39:99:281,0,828	0/1:31,26:57:99:706,0,856	0/1:12,15:27:99:419,0,353	0/1:21,13:34:99:360,0,499	0/1:25,18:42:99:440,0,682	0/1:13,10:23:99:225,0,393	0/0:12,0:12:36.12:0,36,466	0/1:26,10:36:99:336,0,644	0/1:44,19:62:99:536,0,1313	0/1:15,19:34:99:555,0,449
chr10	12729783	.	TCAGTGA	T	11242.86	PASS	AB=0.775;AC=23;AF=0.411;AN=56;BaseQRankSum=10.771;DP=767;FS=13.073;HRun=0;HaplotypeScore=232.7478;InbreedingCoeff=-0.6995;MQ=49.87;MQ0=24;MQRankSum=-13.677;QD=16.61;ReadPosRankSum=-0.994;VQSLOD=2.6812;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:35.53:0,36,1202	0/1:9,1:10:99:113,0,788	0/0:21,0:9:25.90:0,26,796	0/0:26,0:15:39.13:0,39,1260	0/1:34,4:36:99:172,0,2446	0/1:25,12:37:99:821,0,1875	0/1:9,9:18:99:565,0,616	0/1:39,7:38:99:200,0,2489	0/1:20,16:36:99:1072,0,1697	0/1:24,8:32:99:484,0,2189	0/1:21,4:24:99:159,0,1570	0/1:12,12:24:99:819,0,751	0/1:18,8:26:99:441,0,1340	0/1:15,14:29:99:744,0,1093	0/1:16,17:33:99:873,0,1427	0/1:17,9:26:99:696,0,727	0/1:19,10:28:99:401,0,1263	0/1:14,7:21:99:253,0,1037	0/1:30,10:35:99:607,0,2137	0/1:22,8:30:99:466,0,1851	0/1:15,3:18:99:168,0,1228	0/1:23,4:26:99:183,0,2006	0/1:35,5:36:99:179,0,2061	0/1:3,5:8:99:201,0,201	0/0:14,0:14:42.12:0,42,1420	0/1:25,12:36:99:883,0,2108	0/1:34,13:47:99:745,0,2775	0/0:10,0:9:13.10:0,13,642
chr10	12729812	.	CT	C	4509.88	PASS	AB=0.742;AC=22;AF=0.393;AN=56;BaseQRankSum=8.650;DP=718;FS=25.980;HRun=2;HaplotypeScore=254.4228;InbreedingCoeff=-0.6536;MQ=51.02;MQ0=0;MQRankSum=-7.423;QD=7.27;ReadPosRankSum=2.091;VQSLOD=-0.1743;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:48.16:0,48,716	0/1:4,2:6:46.83:47,0,120	0/0:14,0:13:32.14:0,32,414	0/0:18,0:17:38.99:0,39,494	0/1:34,3:35:12.40:12,0,1105	0/1:21,16:37:99:425,0,701	0/1:9,11:20:99:246,0,221	0/1:27,18:34:99:183,0,894	0/1:17,19:36:99:434,0,613	0/1:22,9:30:99:170,0,771	0/0:24,3:26:2.12:0,2,871	0/1:12,15:27:99:378,0,377	0/1:16,11:27:99:214,0,577	0/1:16,16:29:99:400,0,428	0/1:23,14:37:99:266,0,693	0/1:13,11:24:99:202,0,433	0/1:14,13:26:99:271,0,209	0/1:11,2:13:5.85:6,0,307	0/1:19,13:32:99:262,0,581	0/1:23,9:31:99:178,0,759	0/1:9,3:12:37.11:37,0,286	0/1:21,5:25:45.36:45,0,699	0/1:30,4:31:29.96:30,0,817	0/1:5,5:10:68.89:114,0,69	0/0:15,0:15:42.13:0,42,609	0/1:23,13:34:99:306,0,708	0/1:27,12:37:99:283,0,725	0/0:8,0:6:18.06:0,18,269
chr10	12729835	.	GGTCCCAA	G	19862.15	PASS	AB=0.686;AC=25;AF=0.446;AN=56;BaseQRankSum=-11.903;DP=699;FS=2.157;HRun=0;HaplotypeScore=286.9741;InbreedingCoeff=-0.6644;MQ=39.43;MQ0=4;MQRankSum=-7.486;QD=31.08;ReadPosRankSum=1.845;VQSLOD=4.1080;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:17:51.18:0,51,1995	0/1:4,5:8:99:146,0,342	0/0:13,0:8:24.08:0,24,854	0/0:10,0:6:18.06:0,18,695	0/1:7,27:32:99:1647,0,766	0/1:23,15:38:99:1107,0,2327	0/1:14,8:22:99:581,0,1240	0/1:26,17:33:99:958,0,1952	0/1:25,9:33:99:736,0,2276	0/1:13,23:34:99:1645,0,1026	0/1:8,19:26:99:1012,0,309	0/1:16,11:27:99:736,0,1579	0/1:13,13:26:99:981,0,1049	0/1:22,15:33:99:805,0,1936	0/1:16,16:32:99:1056,0,1273	0/1:11,13:24:99:744,0,1101	0/1:19,3:21:99:134,0,1413	0/1:10,4:14:99:218,0,513	0/1:21,10:28:99:817,0,1300	0/1:11,22:32:99:1560,0,872	0/1:5,4:9:99:220,0,350	0/1:7,14:20:99:992,0,558	0/1:9,21:27:99:1058,0,783	0/1:8,2:10:65.75:66,0,476	0/0:19,0:19:57.20:0,57,2260	0/1:15,21:33:99:1350,0,1622	0/1:17,18:31:99:808,0,1815	1/1:1,8:7:18.06:485,18,0
chr10	12729999	.	AC	A	6050.98	PASS	AB=0.764;AC=23;AF=0.442;AN=52;BaseQRankSum=18.951;DP=861;FS=191.516;HRun=3;HaplotypeScore=109.2458;InbreedingCoeff=-0.7931;MQ=48.45;MQ0=46;MQRankSum=-3.490;QD=8.00;ReadPosRankSum=1.822;VQSLOD=0.5925;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:32:90.29:0,90,1274	0/1:7,5:12:99:153,0,224	./.	./.	0/1:24,11:35:99:282,0,773	0/1:29,15:44:99:363,0,1045	0/1:27,8:31:99:233,0,558	0/0:33,6:16:36.12:0,36,518	0/1:26,16:41:99:409,0,865	0/1:29,7:36:99:152,0,1119	0/1:19,9:27:99:185,0,702	0/1:12,9:21:99:277,0,375	0/1:23,4:26:76.45:76,0,761	0/1:25,10:31:99:145,0,779	0/1:20,9:28:99:219,0,699	0/1:10,8:18:99:178,0,343	0/1:34,20:51:99:573,0,912	0/1:25,16:40:99:486,0,739	0/1:24,4:20:88.58:89,0,629	0/1:29,14:43:99:427,0,1060	0/1:30,10:37:99:225,0,619	0/1:16,7:22:99:193,0,581	0/1:27,17:43:99:506,0,936	0/1:16,13:29:99:302,0,492	0/0:14,0:14:42.14:0,42,604	0/1:24,12:33:99:284,0,733	0/1:32,11:39:99:223,0,1090	0/1:10,3:13:72.45:72,0,393
chr10	12730530	.	A	AACTCAT	5583.49	PASS	AB=0.817;AC=19;AF=0.339;AN=56;BaseQRankSum=-1.222;DP=777;FS=0.480;HRun=0;HaplotypeScore=172.6564;InbreedingCoeff=-0.5132;MQ=56.39;MQ0=17;MQRankSum=-12.443;QD=9.09;ReadPosRankSum=-0.933;VQSLOD=3.5346;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:45.15:0,45,1108	0/1:11,4:15:99:379,0,664	0/0:15,0:12:33.09:0,33,725	0/0:16,0:14:36.12:0,36,800	0/1:26,15:40:99:458,0,1646	0/1:30,1:32:22.18:22,0,1866	0/1:8,3:10:82.35:82,0,540	0/1:32,6:32:99:441,0,1695	0/0:16,5:17:39.13:0,39,914	0/1:37,7:39:99:256,0,2046	0/1:38,9:43:99:107,0,2309	0/1:18,4:23:24.51:25,0,959	0/0:19,4:22:54.18:0,54,1281	0/1:16,2:19:61.38:61,0,1009	0/1:18,2:22:99:165,0,1123	0/0:14,6:16:42.14:0,42,993	0/1:20,2:20:72.42:72,0,761	0/1:16,3:18:70.62:71,0,790	0/1:22,5:26:99:178,0,1159	0/1:41,16:51:99:622,0,2403	0/0:12,1:13:30.10:0,30,739	0/1:34,13:41:99:660,0,1815	0/1:31,13:37:99:547,0,1602	0/0:16,3:17:39.13:0,39,945	0/0:17,0:17:51.07:0,51,1119	0/1:25,8:30:99:838,0,1321	0/1:31,9:36:99:229,0,1969	0/1:15,7:17:99:369,0,837
chr10	12730719	.	TG	T	7865.49	PASS	AB=0.715;AC=24;AF=0.429;AN=56;BaseQRankSum=21.275;DP=843;FS=7.720;HRun=2;HaplotypeScore=140.1234;InbreedingCoeff=-0.7500;MQ=57.50;MQ0=6;MQRankSum=-10.843;QD=10.30;ReadPosRankSum=1.915;VQSLOD=2.6507;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:78.20:0,78,1105	0/1:12,7:19:99:179,0,485	0/0:17,0:17:45.13:0,45,640	0/0:18,0:17:50.93:0,51,687	0/1:35,22:55:99:472,0,1351	0/1:26,15:41:99:403,0,1010	0/1:14,12:25:99:337,0,491	0/1:28,22:48:99:555,0,1077	0/1:14,7:21:99:173,0,567	0/1:29,17:41:99:308,0,1184	0/1:23,16:38:99:436,0,879	0/1:15,4:19:98.27:98,0,596	0/1:11,11:20:99:254,0,437	0/1:10,5:15:99:149,0,364	0/1:13,10:23:99:300,0,477	0/1:12,8:17:99:143,0,488	0/1:31,17:48:99:448,0,1189	0/1:16,7:23:99:173,0,484	0/1:14,15:29:99:470,0,541	0/1:30,16:46:99:451,0,1149	0/1:17,13:30:99:308,0,661	0/1:10,16:24:99:436,0,380	0/1:22,14:35:99:331,0,826	0/1:12,7:18:99:182,0,420	0/0:14,0:14:42.13:0,42,611	0/1:21,12:32:99:335,0,766	0/1:23,16:35:99:290,0,932	0/1:16,21:35:99:634,0,613
chr10	12730848	.	CA	C	1852.35	PASS	AB=0.806;AC=23;AF=0.411;AN=56;BaseQRankSum=15.669;DP=665;FS=23.155;HRun=8;HaplotypeScore=97.3271;InbreedingCoeff=-0.7092;MQ=58.56;MQ0=0;MQRankSum=-12.745;QD=3.15;ReadPosRankSum=0.298;VQSLOD=-0.3834;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:69.13:0,69,800	0/0:11,1:12:1.16:0,1,271	0/0:11,0:10:17.96:0,18,189	0/0:14,0:13:26.96:0,27,271	0/1:27,10:37:76.95:77,0,737	0/1:20,5:25:66.10:66,0,583	0/1:10,4:15:65.59:66,0,266	0/1:26,13:39:99:245,0,685	0/1:24,6:30:75.55:76,0,583	0/1:33,8:40:77.87:78,0,785	0/1:27,6:32:11.64:12,0,722	0/1:7,2:9:36.84:37,0,148	0/1:13,3:16:38.73:39,0,423	0/1:12,3:15:7.50:7,0,360	0/1:16,5:21:84.61:85,0,483	0/1:15,3:18:38.72:39,0,412	0/1:21,4:24:47.35:47,0,485	0/1:14,6:20:99:134,0,314	0/1:28,10:36:99:170,0,619	0/1:29,9:37:99:138,0,870	0/1:5,3:8:56.52:57,0,91	0/1:16,4:20:38.73:39,0,405	0/1:22,6:27:89.05:89,0,602	0/1:5,5:10:84.68:121,0,85	0/0:15,0:15:42.11:0,42,494	0/1:24,12:35:99:248,0,651	0/1:40,10:50:82.25:82,0,967	0/1:13,3:16:56.78:57,0,223
chr10	12730872	.	A	AC	3795.10	PASS	AB=0.804;AC=23;AF=0.411;AN=56;BaseQRankSum=16.705;DP=620;FS=97.827;HRun=0;HaplotypeScore=100.0307;InbreedingCoeff=-0.6975;MQ=60.33;MQ0=0;MQRankSum=-15.803;QD=6.86;ReadPosRankSum=2.077;VQSLOD=-0.1155;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:60.05:0,60,733	0/1:8,5:13:99:109,0,264	0/0:11,0:11:27.09:0,27,378	0/0:12,0:11:30.09:0,30,395	0/1:27,7:34:65.93:66,0,967	0/1:20,8:28:99:215,0,727	0/1:16,2:18:44.55:45,0,507	0/1:31,11:41:99:430,0,1047	0/1:24,5:29:99:168,0,800	0/1:24,4:28:93.79:94,0,874	0/1:25,6:30:64.28:64,0,847	0/1:8,3:11:99:109,0,264	0/1:16,3:19:81.76:82,0,614	0/1:16,5:21:99:178,0,490	0/1:17,6:23:99:233,0,581	0/1:13,5:18:99:178,0,462	0/1:19,5:24:99:196,0,666	0/1:12,5:17:99:185,0,397	0/1:18,8:24:99:295,0,552	0/1:37,11:47:99:253,0,1358	0/1:4,3:7:99:118,0,147	0/1:14,4:18:90.98:91,0,466	0/1:22,4:26:99:107,0,827	0/1:6,3:9:99:102,0,202	0/0:14,0:14:39.13:0,39,545	0/1:21,9:30:99:330,0,720	0/1:24,9:33:99:148,0,831	0/0:10,0:10:21.07:0,21,293
chr10	12730948	.	G	GA	4100.06	PASS	AB=0.812;AC=24;AF=0.429;AN=56;BaseQRankSum=11.366;DP=687;FS=158.377;HRun=2;HaplotypeScore=87.4635;InbreedingCoeff=-0.7498;MQ=55.14;MQ0=2;MQRankSum=-8.611;QD=6.65;ReadPosRankSum=2.675;VQSLOD=0.1547;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:18:47.94:0,48,565	0/1:9,5:14:96.27:96,0,264	0/0:15,0:10:30.09:0,30,369	0/0:19,0:9:24.03:0,24,281	0/1:26,7:33:99:175,0,721	0/1:23,2:25:20.19:20,0,640	0/1:17,4:21:99:155,0,497	0/1:30,12:42:99:348,0,890	0/1:28,7:35:99:196,0,936	0/1:18,5:23:99:150,0,566	0/1:27,11:37:99:261,0,660	0/1:11,4:15:99:127,0,363	0/1:15,3:18:75.36:75,0,490	0/1:12,4:16:99:127,0,364	0/1:19,5:24:99:147,0,575	0/1:18,4:22:99:110,0,569	0/1:16,3:19:75.22:75,0,491	0/1:8,4:12:99:141,0,226	0/1:27,3:29:86.98:87,0,774	0/1:36,11:47:99:219,0,1113	0/1:10,2:12:91.04:91,0,299	0/1:16,5:21:99:115,0,501	0/1:18,6:24:99:152,0,532	0/1:11,9:20:99:334,0,281	0/0:17,0:16:51.15:0,51,621	0/1:26,8:34:99:246,0,819	0/1:36,8:44:99:238,0,1109	0/1:16,12:27:99:413,0,475
chr10	12731019	.	GCC	G	3439.94	PASS	AB=0.798;AC=24;AF=0.462;AN=52;BaseQRankSum=16.798;DP=678;FS=1.152;HRun=4;HaplotypeScore=112.6149;InbreedingCoeff=-0.8493;MQ=47.57;MQ0=41;MQRankSum=-16.088;QD=5.68;ReadPosRankSum=1.018;VQSLOD=-0.2333;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:17:42.14:0,42,744	0/1:9,4:13:65.91:66,0,411	./.	./.	0/1:22,16:37:99:124,0,954	0/1:16,4:20:75.15:75,0,842	0/1:7,6:12:99:166,0,251	0/1:30,15:44:99:457,0,1306	0/1:18,9:27:99:237,0,738	0/1:22,13:34:99:434,0,1027	0/1:29,13:41:99:183,0,1140	0/1:7,5:12:99:161,0,353	0/1:17,2:19:13.92:14,0,783	0/1:14,3:17:61.02:61,0,683	0/1:15,5:20:99:116,0,703	0/1:17,4:20:75.15:75,0,842	0/1:24,2:25:22.13:22,0,1057	0/1:4,1:5:29.10:29,0,210	0/1:28,3:27:66.29:66,0,965	0/1:29,12:41:99:140,0,1515	0/1:14,2:16:11.04:11,0,490	0/1:16,7:23:99:122,0,777	0/1:23,6:29:99:141,0,961	0/1:9,4:13:80.01:80,0,416	0/0:13,0:11:36.12:0,36,668	0/1:18,13:31:99:404,0,788	0/1:29,6:35:97.96:98,0,1357	0/1:26,8:34:99:158,0,1262
chr10	12731375	.	CA	C	5287.48	PASS	AB=0.706;AC=42;AF=0.750;AN=56;BaseQRankSum=2.581;DP=548;FS=0.467;HRun=12;HaplotypeScore=105.9197;InbreedingCoeff=0.2922;MQ=59.20;MQ0=8;MQRankSum=2.196;QD=10.92;ReadPosRankSum=0.878;VQSLOD=4.3607;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,1:29:49.04:0,49,625	0/1:2,3:5:18.49:58,0,18	0/1:27,0:17:3.58:4,0,108	0/0:18,0:11:14.88:0,15,86	1/1:3,16:19:37.57:314,38,0	1/1:8,0:25:26.47:77,26,0	1/1:4,0:9:2.03:6,2,0	0/1:13,0:6:17.18:17,0,24	1/1:11,13:24:26.33:249,26,0	1/1:8,20:28:17.99:355,18,0	1/1:6,20:26:44.78:348,45,0	1/1:2,10:11:13.37:132,13,0	1/1:9,14:22:21.82:202,22,0	1/1:2,11:13:26.68:197,27,0	1/1:3,16:20:39.25:324,39,0	0/1:7,9:15:28.76:110,0,29	1/1:11,21:28:11.62:443,12,0	0/1:3,8:11:3.71:78,0,4	0/1:10,11:13:20.72:165,0,21	1/1:6,16:22:14.36:294,14,0	0/1:3,11:13:3.59:154,0,4	1/1:3,12:15:32.86:255,33,0	1/1:3,18:21:37.97:300,38,0	1/1:2,11:13:18:217,18,0	0/0:16,1:17:24.75:0,25,420	1/1:6,15:20:34.06:315,34,0	0/1:7,15:21:16.77:256,0,17	1/1:4,19:23:53.72:418,54,0
chr10	12732202	.	A	ACTTCTGGGGGAATCAC	1963.38	PASS	AB=1.000;AC=18;AF=0.643;AN=28;BaseQRankSum=-0.761;DP=267;FS=2.139;HRun=0;HaplotypeScore=52.3392;InbreedingCoeff=0.4068;MQ=51.29;MQ0=92;MQRankSum=-4.605;QD=20.45;ReadPosRankSum=-2.392;VQSLOD=1.1678;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:23:5.45:5,0,2297	./.	0/0:24,0:18:51.16:0,51,1955	0/0:13,0:13:39.13:0,39,1572	./.	./.	1/1:4,0:3:2.98:21,3,0	1/1:5,1:11:24.03:806,24,0	./.	1/1:2,3:3:6.01:207,6,0	./.	./.	0/0:3,4:3:0.47:0,0,1	1/1:6,4:2:2.97:20,3,0	./.	./.	./.	0/1:5,0:4:12.21:233,0,12	1/1:4,2:2:5.99:49,6,0	1/1:3,7:5:2.97:20,3,0	./.	./.	./.	./.	0/0:11,0:11:33.11:0,33,1504	1/1:4,3:1:3.01:239,3,0	./.	1/1:0,5:2:6.02:478,6,0
chr10	12732908	.	CA	C	1368.07	PASS	AB=0.659;AC=6;AF=0.120;AN=50;BaseQRankSum=-0.986;DP=645;FS=19.184;HRun=4;HaplotypeScore=55.8618;InbreedingCoeff=0.5018;MQ=28.82;MQ0=210;MQRankSum=-0.749;QD=14.25;ReadPosRankSum=0.657;VQSLOD=1.6552;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:23:42.12:0,42,568	0/0:15,0:14:36.12:0,36,503	./.	./.	0/0:35,0:34:39.13:0,39,536	0/0:19,0:12:9.03:0,9,126	0/0:13,0:5:6.02:0,6,84	1/1:8,11:10:21.06:252,21,0	0/0:22,0:12:12:0,12,146	0/0:37,0:25:75.25:0,75,1049	0/0:36,0:31:48.12:0,48,648	0/0:14,0:7:11.99:0,12,130	0/0:15,0:11:18.02:0,18,229	./.	0/0:14,0:9:6.02:0,6,83	0/0:13,0:10:11.83:0,12,146	0/0:33,0:19:18.06:0,18,249	0/0:16,0:8:6.02:0,6,84	0/1:10,7:6:23.95:161,0,24	1/1:1,31:28:69.21:826,69,0	0/1:10,18:18:14.93:261,0,15	0/0:26,0:26:33.07:0,33,431	0/0:28,0:24:29.59:0,30,417	0/0:16,0:12:24.08:0,24,336	0/0:16,0:16:36.11:0,36,503	0/0:12,0:7:21.07:0,21,294	0/0:36,0:21:20.36:0,20,292	0/0:7,0:4:9.03:0,9,126
chr10	12733611	.	C	CAT	2547.07	PASS	AB=0.855;AC=43;AF=0.768;AN=56;BaseQRankSum=2.830;DP=469;FS=2.953;HRun=0;HaplotypeScore=91.2806;InbreedingCoeff=0.5941;MQ=57.96;MQ0=10;MQRankSum=-1.213;QD=6.85;ReadPosRankSum=-1.036;VQSLOD=3.2183;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:24.25:0,24,308	1/1:9,0:9:8.96:69,9,0	0/1:30,0:13:0.74:1,0,98	0/0:19,0:12:11.77:0,12,78	1/1:16,0:16:20.87:162,21,0	0/0:16,0:18:35.84:0,36,274	0/0:10,0:12:20.65:0,21,161	1/1:19,0:17:32.89:269,33,0	1/1:13,0:13:3:27,3,0	1/1:21,0:19:38.76:313,39,0	1/1:6,0:15:3:27,3,0	1/1:11,0:9:10.52:74,11,0	1/1:3,6:9:6.02:85,6,0	1/1:17,0:17:1.82:5,2,0	1/1:13,0:13:14.98:125,15,0	1/1:9,0:9:8.94:75,9,0	1/1:20,0:18:11.97:95,12,0	1/1:9,0:7:17.83:136,18,0	0/1:12,0:10:3.92:126,0,4	1/1:5,21:26:3.01:51,3,0	0/1:7,21:29:8.68:93,0,9	1/1:13,0:12:17.88:143,18,0	1/1:12,0:24:2.75:13,3,0	1/1:12,0:11:11.90:87,12,0	0/0:17,0:17:29.97:0,30,279	1/1:14,0:14:29.93:280,30,0	1/1:17,0:16:29.82:248,30,0	1/1:13,0:12:26.95:219,27,0
chr10	12733620	.	A	ATATATG	4329.24	PASS	AB=0.974;AC=38;AF=0.679;AN=56;BaseQRankSum=-1.860;DP=484;FS=4.697;HRun=0;HaplotypeScore=103.0947;InbreedingCoeff=0.6108;MQ=52.00;MQ0=23;MQRankSum=-0.508;QD=13.00;ReadPosRankSum=-0.042;VQSLOD=3.5898;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:34,0:34:44.22:44,0,603	1/1:8,0:8:10.24:90,10,0	0/0:27,0:11:25.71:0,26,271	0/0:14,0:7:12.50:0,13,162	1/1:14,0:20:17.23:259,17,0	0/0:19,0:18:36.12:0,36,509	0/0:12,0:12:20.23:0,20,279	1/1:15,0:12:7.57:38,8,0	1/1:0,0:12:3.01:91,3,0	1/1:20,0:18:48.40:704,48,0	1/1:11,1:12:3.01:44,3,0	1/1:8,0:11:12.04:191,12,0	1/1:11,0:9:6.47:88,6,0	0/0:4,11:17:0.47:0,0,1	1/1:10,0:13:15.05:250,15,0	1/1:6,4:14:8.98:124,9,0	1/1:9,3:14:12.48:168,12,0	1/1:8,1:7:17.86:289,18,0	0/0:15,0:11:3.16:0,3,64	0/0:27,0:27:4.36:0,4,27	0/1:32,0:30:43.02:86,0,43	1/1:12,0:17:18.03:285,18,0	1/1:21,0:21:2.96:24,3,0	1/1:16,0:13:11.86:150,12,0	0/0:20,0:20:44.81:0,45,657	1/1:10,0:15:29.21:533,29,0	1/1:15,0:14:30.07:435,30,0	1/1:10,0:9:27.09:436,27,0
chr10	12734201	.	AATAAC	A	2621.99	PASS	AB=0.865;AC=9;AF=0.161;AN=56;BaseQRankSum=-3.451;DP=491;FS=7.140;HRun=0;HaplotypeScore=145.9430;InbreedingCoeff=0.5830;MQ=54.26;MQ0=2;MQRankSum=-1.835;QD=27.03;ReadPosRankSum=-6.665;VQSLOD=0.7995;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:75.17:0,75,2075	0/0:14,0:14:16.81:0,17,641	0/1:9,0:7:4.87:5,0,226	0/0:9,0:5:12.04:0,12,311	0/0:33,0:31:74.57:0,75,1554	0/0:14,0:14:33:0,33,518	0/0:11,0:11:11.82:0,12,238	1/1:16,11:17:9.82:706,10,0	0/0:17,0:16:40.17:0,40,677	0/0:28,0:28:61.36:0,61,1108	0/0:17,0:17:46.29:0,46,941	0/0:12,0:12:31.95:0,32,559	0/0:11,0:10:20.49:0,20,421	0/0:11,0:11:22.17:0,22,352	0/0:18,0:17:35.38:0,35,953	0/0:13,0:13:8.62:0,9,501	0/0:20,0:20:27.69:0,28,910	0/0:12,0:11:25.97:0,26,583	0/1:10,21:25:20.66:928,0,21	1/1:0,15:15:33.11:722,33,0	1/1:2,10:12:24.04:400,24,0	0/0:7,0:5:12.04:0,12,257	0/0:19,0:19:19.93:0,20,773	0/1:3,0:3:12.13:12,0,38	0/0:16,0:16:45.15:0,45,1410	0/0:29,0:29:70.64:0,71,1213	0/0:32,0:30:71.63:0,72,1248	0/0:24,0:24:61.62:0,62,1267
chr10	12734202	.	A	AG	1204.12	PASS	AB=0.848;AC=16;AF=0.286;AN=56;BaseQRankSum=11.977;DP=482;FS=59.823;HRun=0;HaplotypeScore=111.2265;InbreedingCoeff=-0.3703;MQ=54.60;MQ0=0;MQRankSum=-11.690;QD=4.22;ReadPosRankSum=-0.622;VQSLOD=0.7536;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:75.18:0,75,995	0/1:12,1:13:9.22:9,0,422	0/0:6,0:6:14.98:0,15,168	0/0:9,0:5:11.97:0,12,143	0/0:28,5:31:30.10:0,30,1014	0/1:9,5:14:99:195,0,292	0/1:8,3:11:99:99,0,265	0/1:23,3:17:91.04:94,0,91	0/1:13,3:16:87.61:88,0,456	0/1:23,5:28:99:146,0,800	0/0:17,1:18:9.55:0,10,621	0/1:11,1:12:25.70:26,0,365	0/1:8,3:10:56.41:56,0,303	0/1:7,3:10:99:120,0,206	0/1:18,1:18:27.14:27,0,572	0/1:11,2:13:50.04:50,0,407	0/1:17,2:19:31.98:32,0,623	0/0:12,0:11:30.09:0,30,403	0/1:23,6:24:76.37:135,0,76	0/0:15,0:15:22.41:0,22,61	0/0:10,1:11:11.12:0,11,42	0/0:5,2:6:12.04:0,12,160	0/0:17,2:19:7.28:0,7,570	0/1:1,1:3:3.30:51,0,3	0/0:15,0:15:45.13:0,45,595	0/1:26,2:28:62.05:62,0,801	0/1:26,7:31:99:170,0,832	0/0:23,1:24:68.77:0,69,860
chr10	12734515	.	C	CA	1487.09	PASS	AB=0.888;AC=7;AF=0.125;AN=56;BaseQRankSum=-5.708;DP=544;FS=0.544;HRun=6;HaplotypeScore=55.1393;InbreedingCoeff=0.4981;MQ=65.52;MQ0=9;MQRankSum=-1.321;QD=15.02;ReadPosRankSum=-0.065;VQSLOD=2.8917;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:14:42.09:0,42,426	0/0:11,1:11:30.07:0,30,306	0/0:16,0:14:19.86:0,20,259	0/0:14,0:14:21.86:0,22,333	0/0:36,1:36:96.14:0,96,970	1/1:0,23:23:66.21:830,66,0	1/1:2,20:21:57.18:711,57,0	0/0:27,0:27:72.15:0,72,728	0/0:18,1:19:51.12:0,51,520	0/0:39,1:38:99:0,105,1071	0/0:17,5:17:45.10:0,45,459	0/0:18,1:18:48.11:0,48,490	0/0:17,0:17:45.10:0,45,459	0/0:18,0:18:51.10:0,51,513	0/1:20,2:22:19.60:20,0,435	0/0:8,0:8:21.05:0,21,214	0/0:14,1:15:5.57:0,6,361	0/1:7,1:8:8.74:9,0,163	0/0:15,2:15:38.46:0,38,397	0/1:20,4:22:58.39:58,0,349	0/0:9,1:10:24.05:0,24,245	0/0:22,0:22:53.87:0,54,551	0/0:13,0:13:36.06:0,36,359	0/0:15,0:15:36.08:0,36,367	0/0:15,0:15:42.05:0,42,419	0/0:24,2:23:54.11:0,54,550	0/0:30,1:31:50.42:0,50,820	0/0:17,0:14:36.03:0,36,365
chr10	12734952	.	C	CG	1065.50	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-6.138;DP=523;FS=7.992;HRun=1;HaplotypeScore=62.0324;InbreedingCoeff=0.9854;MQ=64.89;MQ0=1;MQRankSum=1.311;QD=29.60;ReadPosRankSum=-0.542;VQSLOD=2.4761;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:75.24:0,75,971	0/0:10,0:10:24.02:0,24,291	0/0:14,0:13:36.11:0,36,455	0/0:10,0:10:24.07:0,24,301	0/0:24,0:22:57.19:0,57,738	1/1:3,12:13:39.09:559,39,0	1/1:4,17:19:42.14:629,42,0	0/0:17,0:15:45.12:0,45,545	0/0:21,0:20:48.14:0,48,603	0/0:30,0:28:81.23:0,81,1017	0/0:26,0:26:57.17:0,57,712	0/0:17,0:16:42.05:0,42,522	0/0:20,0:19:57.19:0,57,738	0/0:8,0:7:18.06:0,18,233	0/0:17,0:17:51.15:0,51,647	0/0:16,0:15:42.07:0,42,544	0/0:21,0:21:57.17:0,57,713	0/0:12,0:12:33.11:0,33,428	0/0:24,0:22:63.16:0,63,794	0/0:25,0:24:69.14:0,69,854	0/0:26,0:26:69.22:0,69,895	0/0:14,0:14:36.12:0,36,466	0/0:23,0:21:54.15:0,54,667	0/0:19,0:18:42.09:0,42,525	0/0:18,0:18:51.17:0,51,658	0/0:23,0:22:60.14:0,60,739	0/0:19,0:19:45.15:0,45,583	0/0:8,0:7:15.05:0,15,195
chr10	12735031	.	G	GT	144.99	PASS	AB=1.000;AC=9;AF=0.281;AN=32;BaseQRankSum=2.544;DP=189;FS=6.651;HRun=0;HaplotypeScore=29.3938;InbreedingCoeff=0.4870;MQ=76.22;MQ0=47;MQRankSum=-3.644;QD=8.05;ReadPosRankSum=-0.887;VQSLOD=1.6004;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:40:99:0,108,1476	./.	0/0:25,0:18:50.84:0,51,667	0/0:20,0:17:47.98:0,48,592	./.	1/1:2,0:1:2.68:11,3,0	0/1:5,0:3:0:0,0,0	0/0:8,0:3:5.81:0,6,55	./.	./.	./.	./.	./.	./.	0/0:2,0:1:2.74:0,3,12	0/0:2,0:2:2.80:0,3,13	0/0:3,0:1:2.74:0,3,12	./.	1/1:5,2:3:6.49:96,6,0	1/1:0,1:1:3.01:48,3,0	0/0:13,0:2:2.74:0,3,12	0/0:3,0:1:3.01:0,3,42	./.	0/0:9,0:1:3.01:0,3,42	0/0:18,0:17:48.07:0,48,626	./.	1/1:1,2:3:6.02:96,6,0	./.
chr10	12746932	.	A	ACC	574.28	PASS	AB=0.926;AC=18;AF=0.333;AN=54;BaseQRankSum=-2.319;DP=239;FS=8.594;HRun=0;HaplotypeScore=46.7097;InbreedingCoeff=-0.4949;MQ=43.61;MQ0=19;MQRankSum=-0.848;QD=3.91;ReadPosRankSum=-1.797;VQSLOD=0.0927;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:20.12:0,20,246	0/1:3,1:4:27.09:103,0,27	0/0:12,0:4:9:0,9,98	0/0:11,0:3:2.98:0,3,22	0/1:8,4:12:59.40:59,0,159	0/0:11,0:10:15.04:0,15,179	0/1:5,0:5:1.15:1,0,69	0/1:14,0:7:28.26:28,0,53	0/1:9,0:8:7.51:8,0,103	0/0:9,0:8:11.99:0,12,124	0/1:12,1:13:46.38:46,0,150	0/1:4,3:7:34.53:39,0,35	0/0:11,2:13:10.80:0,11,137	0/1:9,1:9:40.10:40,0,84	0/1:4,1:5:15.01:15,0,39	0/0:4,0:3:0:0,0,0	0/1:7,0:4:35.05:35,0,51	./.	0/1:7,0:6:24.66:25,0,42	0/1:15,0:13:10.73:11,0,212	0/1:3,0:3:32.93:39,0,33	0/0:8,0:7:3.01:0,3,39	0/1:11,0:11:66.39:66,0,78	0/1:7,0:6:29.53:30,0,31	0/0:9,0:9:24.08:0,24,335	0/1:3,0:3:20.20:35,0,20	0/1:12,0:10:53.42:110,0,53	0/1:2,1:3:13.88:31,0,14
chr10	12747783	.	GA	G	1206.44	PASS	AB=0.582;AC=2;AF=0.036;AN=56;BaseQRankSum=5.127;DP=698;FS=2.234;HRun=1;HaplotypeScore=79.3071;InbreedingCoeff=-0.0375;MQ=58.20;MQ0=31;MQRankSum=-0.439;QD=23.20;ReadPosRankSum=0.648;VQSLOD=3.7262;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:75.20:0,75,1141	0/0:12,0:12:36.11:0,36,549	0/0:26,0:17:51.16:0,51,761	0/0:24,0:15:45.11:0,45,658	0/0:29,0:27:69.22:0,69,1077	0/1:10,21:29:99:718,0,253	0/1:5,16:18:37.58:578,0,38	0/0:25,0:24:69.23:0,69,1083	0/0:42,0:42:99:0,126,1933	0/0:36,0:34:99:0,99,1554	0/0:29,0:26:78.27:0,78,1245	0/0:11,0:11:33.10:0,33,504	0/0:19,0:19:54.18:0,54,858	0/0:19,0:18:48.13:0,48,719	0/0:24,0:21:60.20:0,60,958	0/0:24,0:22:63.21:0,63,992	0/0:18,0:18:51.13:0,51,813	0/0:22,0:22:59.87:0,60,920	0/0:22,0:21:60.10:0,60,879	0/0:35,0:34:99:0,102,1580	0/0:24,0:24:72.25:0,72,1150	0/0:31,0:28:75.24:0,75,1173	0/0:28,0:28:81.28:0,81,1287	0/0:28,0:27:72.24:0,72,1133	0/0:5,0:5:15.05:0,15,240	0/0:28,0:26:75.26:0,75,1197	0/0:45,0:40:99:0,111,1658	0/0:15,0:15:33.10:0,33,502
chr10	12748011	.	A	AT	11889.96	PASS	AB=1.000;AC=43;AF=0.768;AN=56;BaseQRankSum=5.379;DP=713;FS=3.645;HRun=8;HaplotypeScore=121.8693;InbreedingCoeff=0.7148;MQ=51.80;MQ0=44;MQRankSum=1.112;QD=18.41;ReadPosRankSum=1.951;VQSLOD=3.8801;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:45.02:0,45,414	1/1:4,5:6:14.99:158,15,0	0/0:10,0:6:15:0,15,135	0/0:7,0:6:6:0,6,55	1/1:28,22:34:95.95:989,96,0	1/1:10,15:20:45.11:501,45,0	1/1:7,8:12:33.06:351,33,0	0/1:57,0:49:99:272,0,478	1/1:6,22:25:60.17:683,60,0	1/1:23,20:33:83.91:867,84,0	1/1:26,16:32:78.13:811,78,0	1/1:6,9:11:21.06:242,21,0	1/1:9,12:20:54.02:556,54,0	1/1:6,11:15:33.04:356,33,0	1/1:11,18:25:60.14:656,60,0	1/1:6,10:14:38.89:405,39,0	1/1:3,21:24:60.13:677,60,0	1/1:1,14:15:42.08:470,42,0	0/0:22,0:20:15.33:0,15,425	0/1:37,0:25:1.28:1,0,312	0/1:26,0:26:72.03:72,0,389	1/1:13,14:22:63.03:651,63,0	1/1:19,19:31:75.06:784,75,0	1/1:4,10:13:36.07:390,36,0	0/0:9,0:9:24.01:0,24,220	1/1:14,25:32:84.07:915,84,0	1/1:13,19:30:60.08:632,60,0	1/1:13,11:19:42.07:451,42,0
chr10	12748012	.	T	TG	5940.75	PASS	AB=0.770;AC=37;AF=0.661;AN=56;BaseQRankSum=10.510;DP=711;FS=4.108;HRun=0;HaplotypeScore=139.9669;InbreedingCoeff=0.1025;MQ=51.70;MQ0=46;MQRankSum=-1.471;QD=8.89;ReadPosRankSum=7.348;VQSLOD=4.5227;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:51.14:0,51,676	0/1:6,2:6:4.61:52,0,5	0/0:9,0:5:15.05:0,15,209	0/0:7,0:6:14.98:0,15,152	1/1:27,24:34:49.31:539,49,0	0/1:18,7:20:33.52:152,0,34	1/1:9,6:12:9.67:172,10,0	0/1:30,28:49:99:685,0,975	1/1:25,4:25:2.51:164,3,0	0/1:26,18:34:33.19:380,0,33	1/1:18,23:32:66.38:544,66,0	0/1:11,5:11:5.63:33,0,6	1/1:13,8:20:48.55:365,49,0	1/1:11,5:14:27.23:152,27,0	1/1:20,8:24:2.85:240,3,0	0/1:12,5:14:9.37:121,0,9	1/1:23,1:24:25.98:169,26,0	1/1:15,1:16:34.53:149,35,0	0/1:20,4:21:27.41:27,0,678	0/1:20,16:24:27:27,0,616	0/1:18,7:25:99:224,0,662	1/1:17,10:22:53.51:406,54,0	1/1:23,14:31:20.81:440,21,0	1/1:10,4:13:30.92:204,31,0	0/0:9,0:9:27.08:0,27,363	0/1:31,7:32:39.94:179,0,40	0/1:25,9:31:32.40:318,0,32	1/1:12,10:18:14.74:196,15,0
chr10	12748048	.	T	TA	140.01	PASS	AB=0.837;AC=7;AF=0.130;AN=54;BaseQRankSum=5.968;DP=652;FS=52.605;HRun=0;HaplotypeScore=123.3372;InbreedingCoeff=-0.1562;MQ=51.89;MQ0=42;MQRankSum=-6.688;QD=0.69;ReadPosRankSum=-0.027;VQSLOD=0.2132;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:57.19:0,57,797	0/0:9,0:8:24.07:0,24,319	0/0:17,0:4:8.62:0,9,89	./.	0/1:38,10:34:72.85:73,0,1029	0/1:17,5:15:88.37:88,0,424	0/0:11,2:11:30.07:0,30,385	0/0:32,0:29:33.30:0,33,952	0/0:35,5:30:81.24:0,81,1080	0/1:39,4:35:7.92:8,0,1154	0/0:28,2:21:12.69:0,13,709	0/1:11,3:10:20.42:20,0,269	0/0:20,3:20:12.69:0,13,694	0/0:12,3:11:30.10:0,30,419	0/1:24,5:25:13.74:14,0,889	0/0:16,1:16:3.64:0,4,553	0/0:21,1:21:57.16:0,57,760	0/0:22,0:22:63.13:0,63,824	0/0:17,2:13:39.12:0,39,529	0/0:24,2:20:54.17:0,54,739	0/0:16,0:16:48.11:0,48,632	0/1:26,5:25:12.58:13,0,750	0/0:26,1:25:24.70:0,25,856	0/0:14,0:13:39.09:0,39,522	0/0:10,0:10:30.10:0,30,419	0/0:33,1:27:54.26:0,54,975	0/0:31,3:29:33.60:0,34,962	0/1:11,5:14:49.16:49,0,344
chr10	12748578	.	A	ATCTCCAAGC	2372.62	PASS	AB=0.899;AC=10;AF=0.179;AN=56;BaseQRankSum=9.241;DP=765;FS=10.155;HRun=0;HaplotypeScore=204.2377;InbreedingCoeff=-0.2289;MQ=65.20;MQ0=1;MQRankSum=-8.872;QD=9.68;ReadPosRankSum=-1.534;VQSLOD=0.9721;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:61,0:61:99:0,169,5014	0/1:9,6:13:99:547,0,522	0/0:29,0:29:80.06:0,80,2124	0/0:30,0:29:81.15:0,81,2073	0/0:17,3:19:42.14:0,42,1213	0/1:21,0:22:64:64,0,1732	0/0:30,0:31:69.24:0,69,1919	0/0:36,0:36:5.18:0,5,2517	0/0:31,3:33:84.26:0,84,2440	0/0:39,1:38:30.36:0,30,2803	0/1:13,0:13:35.12:35,0,706	0/1:10,3:12:99:264,0,616	0/0:30,1:31:84.29:0,84,2449	0/0:22,1:22:63.22:0,63,1929	0/0:19,1:19:51.17:0,51,1470	0/0:13,1:13:30.10:0,30,885	0/1:41,1:42:21.92:22,0,3227	0/1:18,0:18:99:243,0,1193	0/1:25,0:27:99:190,0,1801	0/1:29,0:36:99:741,0,2131	0/0:43,0:43:99:0,114,3245	0/1:20,1:20:99:178,0,1258	0/1:30,3:30:99:234,0,1762	0/0:33,0:33:59.47:0,59,2735	0/0:12,0:12:36.12:0,36,1061	0/0:33,0:32:10.02:0,10,2432	0/0:25,0:25:72.25:0,72,2136	0/0:4,1:4:9.03:0,9,276
chr10	12749665	.	A	AT	353.73	PASS	AB=0.868;AC=7;AF=0.125;AN=56;BaseQRankSum=7.620;DP=648;FS=31.622;HRun=0;HaplotypeScore=74.3968;InbreedingCoeff=-0.1518;MQ=58.37;MQ0=4;MQRankSum=-8.424;QD=2.06;ReadPosRankSum=-0.763;VQSLOD=0.6059;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:78.26:0,78,1085	0/0:7,0:7:21.07:0,21,293	0/0:18,0:18:48.11:0,48,630	0/0:16,0:16:45.08:0,45,606	0/0:30,2:29:75.25:0,75,1046	0/1:30,3:33:53.24:53,0,1042	0/1:18,3:20:38.31:38,0,655	0/0:25,5:23:21.35:0,21,875	0/0:25,2:26:69.23:0,69,961	0/0:24,1:24:69.22:0,69,949	0/0:17,1:17:48.16:0,48,670	0/0:20,3:21:6.38:0,6,664	0/0:26,1:25:63.18:0,63,846	0/0:20,1:20:9.39:0,9,706	0/0:20,4:20:15.46:0,15,791	0/0:15,1:15:45.15:0,45,628	0/1:20,5:25:77.03:77,0,730	0/1:13,2:15:11.77:12,0,403	0/1:31,5:33:88.68:89,0,1039	0/0:26,1:26:78.25:0,78,1066	0/1:24,2:26:23.33:23,0,832	0/0:24,1:24:63.19:0,63,863	0/0:15,0:15:42.12:0,42,569	0/1:11,5:16:99:191,0,410	0/0:20,0:20:54.17:0,54,737	0/0:28,1:29:18.39:0,18,1008	0/0:36,3:39:9.63:0,10,1284	0/0:11,0:11:30.08:0,30,401
chr10	12749780	.	A	AAGG	20699.61	PASS	AB=0.611;AC=37;AF=0.712;AN=52;BaseQRankSum=-5.750;DP=923;FS=65.715;HRun=0;HaplotypeScore=102.4943;InbreedingCoeff=-0.0227;MQ=35.23;MQ0=178;MQRankSum=1.735;QD=25.21;ReadPosRankSum=2.462;VQSLOD=2.0194;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:29:63.15:0,63,957	0/1:5,22:24:44.95:939,0,45	./.	./.	0/1:21,33:46:17:850,0,17	1/1:8,32:34:57.19:1242,57,0	1/1:5,21:23:27.09:581,27,0	0/1:12,16:22:10.26:583,0,10	1/1:10,27:36:57.20:1244,57,0	0/1:17,30:34:99:1324,0,357	0/1:19,29:39:99:925,0,225	1/1:12,13:18:15.05:330,15,0	1/1:4,21:19:30.10:660,30,0	1/1:9,18:20:33.07:679,33,0	1/1:3,22:21:33.11:725,33,0	1/1:4,19:18:36.12:791,36,0	1/1:14,27:33:45.15:978,45,0	1/1:7,16:14:24.08:529,24,0	0/1:12,12:14:99:500,0,105	0/1:12,19:24:99:729,0,369	0/1:12,22:29:8.97:692,0,9	0/1:16,26:26:99:621,0,105	0/1:13,28:36:99:1055,0,174	1/1:14,21:21:42.14:907,42,0	0/0:27,0:27:59.84:0,60,876	0/1:17,27:39:99:1470,0,150	1/1:6,41:41:93.32:2018,93,0	1/1:3,7:8:15.05:331,15,0
chr10	12750828	.	TAC	T	80.82	PASS	AB=0.974;AC=12;AF=0.240;AN=50;BaseQRankSum=1.451;DP=867;FS=4.238;HRun=0;HaplotypeScore=244.3501;InbreedingCoeff=-0.1583;MQ=43.22;MQ0=39;MQRankSum=-1.183;QD=0.29;ReadPosRankSum=1.405;VQSLOD=2.4595;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:37,1:37:47.12:47,0,648	0/0:8,0:8:2.60:0,3,10	0/0:29,0:14:2.99:0,3,23	0/0:37,0:16:2.72:0,3,75	0/0:14,0:12:1.36:0,1,3	1/1:26,0:25:0.88:2,1,0	0/0:43,0:37:4.05:0,4,28	0/0:38,0:34:0.30:0,0,40	1/1:33,0:28:0.73:2,1,0	0/1:42,0:37:15.58:16,0,150	./.	0/0:40,0:33:8.88:0,9,59	0/1:24,0:19:1.66:2,0,47	0/0:47,0:40:5.11:0,5,27	0/0:36,0:31:2.96:0,3,19	0/0:35,0:30:3:0,3,25	0/1:29,0:27:12.27:12,0,41	0/0:19,0:14:5.01:0,5,82	0/1:23,0:20:5.38:5,0,15	0/1:25,0:24:15.14:30,0,15	0/0:70,0:61:0.16:0,0,37	0/0:44,0:42:6.83:0,7,43	./.	./.	0/1:26,6:31:71.17:71,0,447	0/0:34,0:28:10.53:0,11,175	0/0:24,0:20:13.33:0,13,142	0/1:9,0:6:1.93:2,0,37
chr10	12750838	.	C	CT	3213.33	PASS	AB=0.854;AC=19;AF=0.339;AN=56;BaseQRankSum=4.736;DP=852;FS=128.574;HRun=0;HaplotypeScore=224.1437;InbreedingCoeff=-0.5188;MQ=41.13;MQ0=34;MQRankSum=-9.665;QD=5.37;ReadPosRankSum=-4.718;VQSLOD=0.5192;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:46:98.97:0,99,1243	0/0:9,0:9:11.47:0,11,137	0/0:32,0:13:36.11:0,36,483	0/0:45,0:15:45.14:0,45,600	0/1:17,1:16:20.30:20,0,281	0/1:24,6:29:99:292,0,208	0/1:34,6:36:99:195,0,332	0/1:31,2:27:99:129,0,605	0/1:18,9:24:99:274,0,438	0/1:34,6:35:88.90:89,0,1072	0/0:15,3:14:20.93:0,21,289	0/1:20,11:26:99:378,0,243	0/1:14,9:18:99:289,0,192	0/1:31,8:35:99:351,0,532	0/1:26,7:28:99:214,0,349	0/1:19,8:24:99:311,0,356	0/1:23,1:23:11.26:11,0,367	0/1:16,1:13:33.34:33,0,285	0/1:11,2:11:99:116,0,202	0/0:30,0:28:35.69:0,36,493	0/1:77,6:74:10.56:11,0,605	0/1:36,5:40:90.69:91,0,521	0/1:11,1:12:32.19:32,0,134	0/0:22,3:21:6.02:0,6,83	0/0:37,0:36:79.93:0,80,996	0/1:24,6:27:99:205,0,713	0/1:17,8:20:99:332,0,217	0/0:7,0:7:18.04:0,18,232
chr10	12750844	.	CACACACACACAT	C	4916.09	PASS	AB=0.968;AC=29;AF=0.518;AN=56;BaseQRankSum=-2.220;DP=918;FS=42.465;HRun=0;HaplotypeScore=315.9421;InbreedingCoeff=-0.2997;MQ=38.01;MQ0=43;MQRankSum=0.819;QD=6.41;ReadPosRankSum=-1.038;VQSLOD=2.4608;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:45:45.66:0,46,2934	1/1:8,3:10:11.58:183,12,0	0/0:33,0:10:5.69:0,6,49	0/1:47,0:12:2.11:2,0,45	0/1:24,0:22:34.14:34,0,218	0/1:30,0:28:10.86:18,0,11	1/1:41,0:36:15.02:107,15,0	0/0:34,0:24:15.11:0,15,171	1/1:25,0:21:23.81:473,24,0	0/1:45,3:43:99:1032,0,539	0/1:21,3:19:62.05:84,0,62	0/1:44,1:34:78.32:204,0,78	0/1:29,1:23:99:255,0,166	1/1:39,0:34:21.24:368,21,0	0/1:33,1:29:64.43:178,0,64	0/1:28,2:23:25.16:146,0,25	0/1:22,1:22:69.17:303,0,69	0/1:17,0:13:81.30:81,0,105	0/1:11,0:8:19.54:20,0,90	0/1:29,0:27:2.73:3,0,177	0/1:88,0:77:88.65:89,0,205	0/1:49,2:49:99:217,0,110	1/1:15,2:15:2.68:11,3,0	0/1:26,0:21:0:0,0,0	0/0:34,0:33:36.41:0,36,2616	0/1:35,2:31:99:748,0,384	0/1:28,2:23:99:220,0,318	0/1:8,1:8:99:140,0,254
chr10	12750846	.	C	CT	1547.47	PASS	AB=0.859;AC=20;AF=0.357;AN=56;BaseQRankSum=7.280;DP=913;FS=72.428;HRun=0;HaplotypeScore=239.6681;InbreedingCoeff=-0.5648;MQ=37.10;MQ0=42;MQRankSum=-4.943;QD=2.44;ReadPosRankSum=-0.915;VQSLOD=0.2772;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:45:96.04:0,96,1258	0/1:10,1:10:5.04:5,0,117	0/0:34,0:9:17.65:0,18,212	0/0:48,0:12:20.27:0,20,440	0/1:21,2:21:97.53:256,0,98	0/0:21,6:25:9.01:0,9,119	0/1:32,9:36:23.96:24,0,268	0/1:28,4:21:35.46:35,0,630	0/1:16,7:19:19.67:20,0,265	0/1:40,10:45:99:226,0,736	0/1:22,1:19:76.67:77,0,146	0/1:32,12:33:38.14:38,0,205	0/1:22,10:24:45.65:46,0,164	0/0:30,7:32:26.32:0,26,371	0/1:27,8:30:32.27:32,0,245	0/1:20,9:22:35.68:36,0,199	0/0:21,2:22:15.78:0,16,420	0/1:13,3:12:99:130,0,212	0/1:10,0:7:14.96:15,0,89	0/1:27,2:27:64.83:65,0,299	0/1:70,21:76:99:168,0,351	0/1:44,6:48:70.75:71,0,359	0/1:15,1:14:35.13:41,0,35	0/0:20,4:20:3.01:0,3,42	0/0:33,0:32:69.31:0,69,835	0/1:32,7:34:99:240,0,486	0/1:22,9:23:99:134,0,104	0/1:8,1:8:47.44:47,0,93
chr10	12750848	.	C	CT	1410.43	PASS	AB=0.880;AC=21;AF=0.375;AN=56;BaseQRankSum=4.663;DP=911;FS=43.292;HRun=0;HaplotypeScore=241.7028;InbreedingCoeff=-0.6145;MQ=35.81;MQ0=43;MQRankSum=-3.710;QD=2.15;ReadPosRankSum=-1.310;VQSLOD=0.9954;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:46:96.03:0,96,1242	0/1:11,0:10:14.85:15,0,112	0/0:33,0:7:15.04:0,15,194	0/0:49,0:13:17.65:0,18,400	0/1:15,9:22:80.21:194,0,80	0/0:25,1:25:6:0,6,82	0/1:36,4:35:8.83:9,0,270	0/1:31,0:20:31:31,0,519	0/1:19,3:19:20.32:20,0,265	0/1:50,4:49:99:302,0,811	0/1:16,4:17:56.04:56,0,109	0/1:38,4:31:24.84:25,0,215	0/1:25,6:23:19.26:19,0,218	0/0:35,2:32:26.31:0,26,354	0/1:29,6:30:13.43:13,0,223	0/1:27,3:23:41.16:41,0,188	0/1:20,3:21:12.82:13,0,348	0/1:14,2:12:89.34:89,0,243	0/1:11,1:7:29.53:30,0,169	0/1:24,4:27:41.37:41,0,302	0/1:72,17:74:99:152,0,334	0/1:44,6:48:81.55:82,0,288	0/1:13,4:15:29.03:29,0,32	0/0:23,1:19:3.01:0,3,41	0/0:32,0:31:66.29:0,66,788	0/1:35,4:33:99:145,0,620	0/1:26,5:23:99:143,0,285	0/1:7,2:8:99:118,0,101
chr10	12750850	.	CACACAT	C	3439.22	PASS	AB=0.994;AC=36;AF=0.643;AN=56;BaseQRankSum=0.146;DP=910;FS=14.582;HRun=0;HaplotypeScore=269.5105;InbreedingCoeff=-0.1310;MQ=35.53;MQ0=41;MQRankSum=-1.106;QD=4.31;ReadPosRankSum=-7.034;VQSLOD=-0.3459;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:46:40.60:0,41,1769	1/1:12,0:11:11.86:83,12,0	0/0:31,0:6:1.85:0,2,35	0/1:50,0:11:20.74:46,0,21	1/1:24,0:22:0.61:99,1,0	1/1:24,3:25:5.88:75,6,0	1/1:40,2:37:20.61:130,21,0	1/1:32,0:20:22.01:259,22,0	1/1:22,0:19:22.94:136,23,0	0/1:54,0:49:99:572,0,222	1/1:21,0:17:4.01:40,4,0	0/1:43,0:32:34.87:48,0,35	0/1:31,0:23:29.52:116,0,30	1/1:38,0:33:24.97:169,25,0	0/1:33,0:28:19.56:42,0,20	1/1:30,0:23:14.77:106,15,0	0/1:23,0:21:7.18:159,0,7	0/1:17,0:13:29.22:56,0,29	0/1:11,1:6:23.66:143,0,24	1/1:28,2:28:18.75:244,19,0	0/1:87,1:73:6.30:205,0,6	0/1:48,0:46:23.53:91,0,24	1/1:17,0:15:2.68:11,3,0	0/1:23,0:18:0:0,0,0	0/0:30,0:29:38.62:0,39,1448	0/1:38,0:33:99:392,0,142	0/1:33,0:25:99:136,0,149	0/1:9,0:8:80.40:80,0,94
chr10	12750854	.	CAT	C	3415.65	PASS	AB=0.957;AC=42;AF=0.750;AN=56;BaseQRankSum=1.900;DP=884;FS=3.741;HRun=0;HaplotypeScore=238.9769;InbreedingCoeff=0.2442;MQ=34.96;MQ0=37;MQRankSum=0.549;QD=4.55;ReadPosRankSum=-5.649;VQSLOD=1.8200;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:44:10.41:0,10,880	1/1:11,1:11:7.81:59,8,0	0/0:33,0:5:4.45:0,4,45	0/1:52,0:9:20.63:48,0,21	1/1:24,0:22:25.14:137,25,0	1/1:24,0:22:5.99:51,6,0	1/1:36,0:33:20.63:130,21,0	1/1:32,0:19:22.12:211,22,0	1/1:18,3:19:25.28:174,25,0	1/1:53,2:52:7.92:548,8,0	1/1:20,1:18:17.42:107,17,0	0/1:38,0:29:22.04:72,0,22	0/1:30,2:24:5.12:131,0,5	1/1:35,1:31:26.66:194,27,0	0/1:34,1:28:6.93:68,0,7	1/1:26,1:20:14.80:107,15,0	1/1:21,0:20:25.74:161,26,0	0/1:14,0:12:23.84:49,0,24	1/1:13,0:8:15.50:103,15,0	1/1:29,0:27:28.82:197,29,0	1/1:74,0:67:29.88:191,30,0	1/1:47,1:46:28.56:160,29,0	1/1:16,0:14:2.68:11,3,0	0/0:21,0:18:0:0,0,0	0/0:30,0:29:7.91:0,8,645	1/1:37,0:31:1.42:282,1,0	0/1:30,2:24:66.31:122,0,66	1/1:9,0:9:16.42:104,16,0
chr10	12750856	.	TAC	T	2836.56	PASS	AB=0.928;AC=38;AF=0.679;AN=56;BaseQRankSum=3.314;DP=885;FS=6.496;HRun=0;HaplotypeScore=240.2669;InbreedingCoeff=0.1653;MQ=34.88;MQ0=37;MQRankSum=-0.663;QD=4.00;ReadPosRankSum=-4.518;VQSLOD=1.5609;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:43:69.67:0,70,1015	0/0:9,2:11:0.67:0,1,7	0/0:33,0:4:9:0,9,96	0/0:53,0:9:6.88:0,7,64	1/1:24,1:23:24.07:290,24,0	1/1:24,0:22:0.47:1,0,0	1/1:36,4:35:19.60:208,20,0	1/1:23,7:17:13.85:144,14,0	1/1:19,2:19:4.51:50,5,0	0/1:47,9:53:60.67:480,0,61	1/1:22,0:19:12.03:144,12,0	0/1:36,1:28:13.85:25,0,14	0/1:26,3:22:6.71:84,0,7	1/1:32,3:30:5.09:51,5,0	0/1:28,8:29:11.29:52,0,11	1/1:19,6:18:3.01:33,3,0	0/1:23,0:20:3.04:96,0,3	0/1:16,0:12:21.45:121,0,21	1/1:12,1:8:4.32:33,4,0	1/1:25,3:26:20.85:220,21,0	1/1:73,10:71:22.51:219,23,0	1/1:45,3:46:1.11:189,1,0	1/1:17,0:15:6:61,6,0	1/1:23,0:19:2.80:23,3,0	0/0:29,0:27:53.30:0,53,735	0/1:34,2:30:83.35:214,0,83	0/1:29,3:24:17.80:144,0,18	1/1:9,1:9:14.69:121,15,0
chr10	12750862	.	C	CT	1356.89	PASS	AB=0.883;AC=14;AF=0.250;AN=56;BaseQRankSum=4.081;DP=915;FS=49.690;HRun=0;HaplotypeScore=245.5973;InbreedingCoeff=-0.3443;MQ=36.01;MQ0=40;MQRankSum=0.188;QD=3.29;ReadPosRankSum=1.580;VQSLOD=1.6758;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:40:81.25:0,81,1115	0/1:12,0:11:39.65:40,0,55	0/0:41,0:7:15.05:0,15,207	0/0:56,0:8:18.05:0,18,236	0/0:23,1:23:28.30:0,28,155	0/0:21,1:20:5.98:0,6,64	0/0:43,0:38:24.54:0,25,180	0/0:44,0:28:65.47:0,65,682	0/1:14,5:17:20.47:257,0,20	0/1:46,6:49:99:254,0,815	0/1:22,2:21:27.78:28,0,77	0/1:34,3:29:96.07:96,0,102	0/1:28,4:25:95.80:96,0,152	0/1:23,10:28:79.48:185,0,79	0/1:34,4:32:97.65:98,0,98	0/1:23,2:18:36.09:36,0,88	0/1:16,4:17:46.40:46,0,145	0/0:14,1:12:14.19:0,14,182	0/0:18,0:12:27.69:0,28,298	0/0:30,0:28:34.59:0,35,292	0/0:86,0:73:27.67:0,28,250	0/1:32,13:43:99:110,0,112	0/0:20,0:18:17.84:0,18,136	0/0:22,4:22:6.44:0,6,45	0/0:30,0:28:63.65:0,64,865	0/1:29,6:30:99:204,0,504	0/1:28,4:25:52.83:53,0,322	0/1:8,0:8:9.20:9,0,67
chr10	12750961	.	TTC	T	3531.90	PASS	AB=0.990;AC=28;AF=0.500;AN=56;BaseQRankSum=7.669;DP=937;FS=0.617;HRun=0;HaplotypeScore=306.7969;InbreedingCoeff=-0.4266;MQ=54.49;MQ0=10;MQRankSum=5.324;QD=4.65;ReadPosRankSum=14.900;VQSLOD=-0.1140;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,123,2334	1/1:22,0:20:17.15:160,17,0	0/0:49,0:36:56.99:0,57,1106	0/0:62,0:32:20.16:0,20,655	1/1:35,0:35:1.27:179,1,0	0/1:17,0:15:65.16:65,0,84	0/1:38,2:33:13.08:191,0,13	0/1:45,7:41:99:175,0,269	0/1:34,0:32:58.73:208,0,59	0/1:53,0:48:99:271,0,300	0/1:27,0:27:52.72:53,0,74	0/1:31,0:30:75.48:220,0,75	0/1:20,0:17:64.99:65,0,77	0/1:40,0:36:95.68:162,0,96	0/1:36,0:34:57.83:154,0,58	0/1:26,0:25:52.69:148,0,53	0/1:23,1:24:6.15:254,0,6	1/1:18,0:17:22.08:201,22,0	0/1:24,0:19:74.95:75,0,139	1/1:19,6:24:17.95:179,18,0	0/1:95,0:85:99:179,0,429	0/1:35,0:34:80.70:112,0,81	0/1:19,0:18:15.77:88,0,16	0/1:33,0:30:45.14:45,0,100	0/0:22,0:22:66.19:0,66,1199	0/1:29,0:28:99:201,0,162	0/1:17,0:15:5.28:126,0,5	0/1:7,0:7:20.64:21,0,89
chr10	12750962	.	TCA	T	13387.14	PASS	AB=0.727;AC=46;AF=0.821;AN=56;BaseQRankSum=4.092;DP=929;FS=25.010;HRun=0;HaplotypeScore=272.8089;InbreedingCoeff=0.7556;MQ=54.37;MQ0=11;MQRankSum=1.874;QD=17.95;ReadPosRankSum=5.182;VQSLOD=3.7610;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,111,1861	1/1:6,16:20:51.04:606,51,0	0/0:50,0:37:47.75:0,48,908	0/0:64,0:33:17.49:0,17,604	1/1:18,16:34:48.05:625,48,0	1/1:7,10:15:24.04:293,24,0	1/1:17,23:33:44.26:568,44,0	1/1:30,23:40:67.17:791,67,0	1/1:11,23:32:60.20:780,60,0	1/1:23,29:47:29.67:1116,30,0	1/1:12,15:27:20.97:273,21,0	1/1:11,20:30:63.15:785,63,0	1/1:4,16:17:23.99:290,24,0	1/1:9,31:36:53.92:644,54,0	1/1:11,23:32:63.06:747,63,0	1/1:9,16:24:45.11:565,45,0	1/1:8,16:24:51.12:649,51,0	1/1:5,13:17:45.10:560,45,0	0/1:11,8:14:23.50:285,0,24	1/1:10,15:24:44.61:552,45,0	1/1:40,54:84:68.50:893,69,0	1/1:17,18:34:39.08:488,39,0	1/1:8,10:17:27.09:351,27,0	1/1:12,20:29:20.99:255,21,0	0/0:22,0:22:54.18:0,54,915	1/1:11,18:28:34.91:682,35,0	1/1:4,13:15:39.08:488,39,0	0/1:4,2:6:13.97:101,0,14
chr10	12751005	.	AC	A	34.67	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=7.180;DP=902;FS=123.682;HRun=1;HaplotypeScore=298.0055;InbreedingCoeff=0.1283;MQ=43.37;MQ0=24;MQRankSum=-7.115;QD=0.22;ReadPosRankSum=-0.574;VQSLOD=-0.7441;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,1:45:99:0,120,1851	0/1:20,0:19:18.87:19,0,445	0/0:91,1:30:63.66:0,64,915	0/0:92,1:29:4.76:0,5,924	0/0:20,0:20:3.82:0,4,292	0/0:18,0:17:15.03:0,15,217	0/0:31,0:27:20.62:0,21,301	0/0:60,0:50:30.86:0,31,1241	0/0:29,0:28:36.12:0,36,558	0/0:39,0:36:14.14:0,14,932	0/1:29,0:29:34.02:34,0,124	0/0:23,0:22:13.11:0,13,479	0/0:21,0:18:4.11:0,4,199	0/0:33,0:32:33.10:0,33,495	0/0:32,0:30:28.77:0,29,506	0/0:21,0:20:35.15:0,35,518	0/0:18,0:18:26.34:0,26,385	0/0:18,0:16:24.45:0,24,494	0/0:15,0:10:13.27:0,13,226	0/1:40,0:40:8.09:8,0,216	0/0:54,0:49:13.04:0,13,365	0/1:37,0:35:2.14:2,0,265	0/0:19,0:19:4.19:0,4,185	0/0:20,1:19:7:0,7,60	0/0:17,2:19:48.15:0,48,745	0/1:25,0:24:8.73:9,0,485	0/0:20,0:18:34.18:0,34,479	1/1:8,0:8:16.54:86,17,0
chr10	12751006	.	CT	C	1652.13	PASS	AB=0.976;AC=20;AF=0.357;AN=56;BaseQRankSum=5.789;DP=911;FS=94.800;HRun=1;HaplotypeScore=290.4752;InbreedingCoeff=-0.4040;MQ=42.62;MQ0=23;MQRankSum=-6.003;QD=2.77;ReadPosRankSum=-2.613;VQSLOD=-0.0015;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,2:45:99:0,120,1862	0/1:19,0:18:95.19:95,0,364	0/0:86,7:30:61:0,61,916	0/1:80,12:28:46.13:46,0,865	0/1:18,1:19:72.96:73,0,236	0/1:18,0:17:21.91:22,0,163	0/1:29,2:28:84.03:84,0,247	0/1:60,0:51:99:324,0,1086	0/0:30,0:29:36.05:0,36,473	0/1:41,0:38:99:145,0,748	0/1:28,0:29:99:102,0,114	0/1:23,1:22:7.82:8,0,386	0/1:23,0:20:37.62:38,0,141	0/0:33,0:32:30.07:0,30,385	0/0:30,1:29:9.16:0,9,427	0/0:21,0:20:35.10:0,35,462	0/1:18,0:18:28.17:28,0,281	0/1:18,0:16:22.66:23,0,376	0/1:17,0:12:86.31:86,0,188	0/1:42,0:42:99:213,0,180	0/1:52,2:48:34.66:35,0,301	0/1:35,2:36:92.71:93,0,236	0/1:19,0:19:13.24:13,0,170	0/0:21,0:19:7:0,7,60	0/0:18,1:19:48.16:0,48,762	0/1:23,1:24:99:157,0,349	0/0:20,0:18:34.13:0,34,438	1/1:8,0:8:23.95:233,24,0
chr10	12751007	.	T	TACACACACACTC	16570.37	PASS	AB=0.697;AC=47;AF=0.839;AN=56;BaseQRankSum=3.202;DP=976;FS=15.458;HRun=0;HaplotypeScore=351.9785;InbreedingCoeff=0.9056;MQ=43.80;MQ0=23;MQRankSum=-3.885;QD=22.82;ReadPosRankSum=-1.423;VQSLOD=2.3448;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,108,3043	1/1:7,7:20:30.03:858,30,0	0/0:94,0:28:54.44:0,54,916	0/0:90,0:27:24.30:0,24,778	1/1:10,2:19:15.05:233,15,0	1/1:7,1:17:20.99:405,21,0	1/1:21,0:28:28.85:459,29,0	1/1:37,0:52:68.72:1770,69,0	1/1:15,9:34:18.06:480,18,0	1/1:18,19:47:99:2455,108,0	1/1:10,13:31:21.06:290,21,0	1/1:13,11:28:32.89:742,33,0	1/1:13,7:24:8.98:192,9,0	1/1:11,19:33:21.54:624,22,0	1/1:13,17:36:21.07:690,21,0	1/1:10,9:23:21.07:803,21,0	1/1:11,2:20:21.01:706,21,0	1/1:11,0:15:24.08:672,24,0	1/1:14,0:12:24.03:446,24,0	1/1:9,15:52:45.43:399,45,0	1/1:36,1:45:7.88:112,8,0	1/1:19,2:35:31.97:543,32,0	1/1:8,7:23:18.06:322,18,0	0/1:12,7:21:0:0,0,0	0/0:20,0:20:42.05:0,42,1383	1/1:11,15:30:72.25:2384,72,0	1/1:10,10:22:18:555,18,0	1/1:0,2:8:24.03:430,24,0
chr10	12751020	.	G	GCA	1049.46	PASS	AB=0.971;AC=15;AF=0.268;AN=56;BaseQRankSum=10.732;DP=970;FS=49.069;HRun=0;HaplotypeScore=280.9123;InbreedingCoeff=-0.3552;MQ=44.46;MQ0=33;MQRankSum=-7.580;QD=2.20;ReadPosRankSum=0.977;VQSLOD=1.3878;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,105,1326	0/1:17,0:16:20.02:20,0,73	0/0:103,0:28:26.63:0,27,508	0/0:79,0:25:27.80:0,28,326	0/1:20,0:20:29.80:30,0,221	0/0:20,0:19:20.90:0,21,267	0/1:30,3:29:24.76:25,0,296	0/1:56,8:54:99:359,0,835	0/0:32,0:31:11.62:0,12,141	0/1:46,0:43:11.81:12,0,688	0/1:32,0:32:43.58:44,0,96	0/1:32,0:30:2.99:3,0,113	0/0:26,0:23:0.11:0,0,90	0/0:31,0:30:16.25:0,16,142	0/1:34,0:32:34.09:34,0,78	0/0:23,0:22:7.49:0,7,145	0/0:16,0:16:30.41:0,30,321	0/0:16,0:14:2:0,2,208	0/1:18,0:11:11.06:11,0,219	0/1:38,17:54:99:605,0,188	0/0:53,0:48:29.61:0,30,382	0/1:37,0:35:15.73:16,0,177	0/1:28,0:27:16.96:17,0,133	0/1:28,0:26:0.22:0,0,206	0/0:20,0:20:51.16:0,51,649	0/0:30,0:29:59.18:0,59,730	0/1:21,0:19:1.49:1,0,139	0/1:9,0:9:16.09:16,0,133
chr10	12753638	.	TA	T	8433.18	PASS	AB=0.583;AC=47;AF=0.839;AN=56;BaseQRankSum=1.949;DP=572;FS=9.683;HRun=11;HaplotypeScore=71.1179;InbreedingCoeff=0.8463;MQ=77.83;MQ0=3;MQRankSum=-0.873;QD=18.95;ReadPosRankSum=3.233;VQSLOD=5.6867;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,99,1045	1/1:0,6:6:11.97:99,12,0	0/0:30,1:20:17.13:0,17,170	0/0:40,0:23:17.47:0,17,202	1/1:5,24:30:70.93:572,71,0	1/1:2,13:15:3.96:239,4,0	0/1:2,5:7:3.52:105,0,4	1/1:4,24:29:73.92:594,74,0	1/1:4,17:21:47.92:394,48,0	1/1:5,28:34:88.93:719,89,0	1/1:2,22:24:59.82:480,60,0	1/1:0,10:10:29.97:246,30,0	1/1:1,11:12:29.96:246,30,0	1/1:3,10:13:26.96:222,27,0	1/1:5,15:20:12.96:313,13,0	1/1:0,20:21:49.98:400,50,0	1/1:0,17:17:44.95:369,45,0	1/1:2,13:15:19.18:276,19,0	1/1:4,15:19:41.46:344,41,0	1/1:2,21:23:59.79:478,60,0	1/1:3,14:17:35.94:296,36,0	1/1:4,10:15:31.68:243,32,0	1/1:2,25:27:59.91:493,60,0	1/1:1,10:11:20.97:172,21,0	0/0:13,1:15:17.29:0,17,373	1/1:2,15:17:40.92:357,41,0	1/1:1,24:27:64:504,64,0	1/1:5,10:15:32.95:271,33,0
chr10	12754713	.	GC	G	14768.84	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=14.386;DP=681;FS=0.605;HRun=2;HaplotypeScore=69.9997;InbreedingCoeff=0.9997;MQ=71.64;MQ0=0;MQRankSum=1.924;QD=35.67;ReadPosRankSum=7.179;VQSLOD=4.4971;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:55:99:0,163,2423	1/1:1,10:11:30.10:389,30,0	0/0:18,0:17:42.40:0,42,525	0/0:20,0:20:54.17:0,54,746	1/1:0,16:16:45.15:584,45,0	0/0:23,0:23:66.22:0,66,987	0/0:23,0:23:69.23:0,69,1034	0/0:28,0:27:72.22:0,72,1040	1/1:0,31:31:84.27:1087,84,0	1/1:0,20:20:60.20:779,60,0	1/1:0,22:22:63.20:815,63,0	1/1:0,31:31:87.28:1129,87,0	1/1:0,24:24:57.66:741,58,0	1/1:1,23:24:60.19:779,60,0	1/1:0,37:37:99:1402,108,0	1/1:0,19:19:51.17:663,51,0	1/1:0,31:31:84.27:1090,84,0	1/1:0,14:14:39.13:506,39,0	0/0:22,0:22:63.19:0,63,897	0/0:24,0:24:69.23:0,69,1031	0/0:30,0:30:87.28:0,87,1284	1/1:1,24:25:69.22:891,69,0	1/1:0,12:12:27.09:351,27,0	1/1:0,22:22:63.20:818,63,0	0/0:23,0:23:66.20:0,66,949	1/1:1,31:32:93.27:1189,93,0	1/1:1,32:33:90.29:1168,90,0	1/1:0,10:10:30.10:389,30,0
chr10	12755197	.	GGAGAGAGAGAGA	G	5121.23	PASS	AB=0.876;AC=33;AF=0.635;AN=52;BaseQRankSum=3.850;DP=620;FS=87.404;HRun=0;HaplotypeScore=196.8617;InbreedingCoeff=0.5396;MQ=56.67;MQ0=18;MQRankSum=-4.795;QD=13.20;ReadPosRankSum=-0.637;VQSLOD=-0.0233;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:11.07:0,11,296	1/1:15,1:16:11.64:255,12,0	0/0:36,0:19:0.47:0,0,1	./.	1/1:20,7:26:12.45:373,12,0	0/0:23,0:23:5.98:0,6,260	0/0:18,0:18:12.01:0,12,417	0/0:24,0:21:6.02:0,6,182	0/1:17,3:20:99:196,0,133	0/1:27,1:33:2.35:378,0,2	1/1:17,0:18:9.03:222,9,0	1/1:13,2:15:6.02:205,6,0	1/1:13,4:16:6.02:206,6,0	1/1:18,7:26:12.04:339,12,0	1/1:10,4:12:6.02:206,6,0	1/1:18,7:25:9.01:229,9,0	0/1:24,0:25:98.61:99,0,149	1/1:14,7:21:5.07:302,5,0	./.	0/0:14,0:14:13.27:0,13,428	0/0:18,0:20:24.07:0,24,996	1/1:16,6:22:9.03:289,9,0	1/1:19,2:21:5.76:147,6,0	1/1:12,5:18:6.02:186,6,0	0/0:16,0:15:12.04:0,12,625	1/1:21,10:30:36.06:898,36,0	1/1:17,6:25:7.98:269,8,0	1/1:7,1:8:12.04:324,12,0
chr10	12756558	.	AC	A	14235.78	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=13.027;DP=639;FS=4.384;HRun=1;HaplotypeScore=64.1974;InbreedingCoeff=0.9988;MQ=76.65;MQ0=0;MQRankSum=-1.502;QD=38.06;ReadPosRankSum=5.910;VQSLOD=5.1371;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:87.27:0,87,1354	1/1:0,16:16:42.01:540,42,0	0/0:25,0:24:72.21:0,72,1074	0/0:30,0:26:78.09:0,78,1126	1/1:0,26:25:69.14:921,69,0	0/0:24,0:24:72.21:0,72,1101	0/0:15,0:15:45.15:0,45,716	0/0:28,0:28:84.27:0,84,1300	1/1:0,18:18:44.96:629,45,0	1/1:0,23:23:66.22:923,66,0	1/1:0,28:28:81.27:1133,81,0	1/1:0,20:20:48.16:671,48,0	1/1:0,20:20:54.18:755,54,0	1/1:0,15:15:39.13:545,39,0	1/1:0,29:29:81.27:1133,81,0	1/1:0,17:17:51.17:713,51,0	1/1:0,30:30:81.27:1133,81,0	1/1:0,14:14:39.13:545,39,0	0/0:22,0:22:66.21:0,66,1032	0/0:30,0:30:87.30:0,87,1384	0/0:36,0:36:99:0,105,1663	1/1:0,27:27:78.22:1069,78,0	1/1:0,16:16:45.15:629,45,0	1/1:0,19:19:54.18:755,54,0	0/0:25,0:25:75.22:0,75,1150	1/1:0,22:22:63.21:881,63,0	1/1:0,27:27:72.24:1007,72,0	1/1:0,7:7:18.06:252,18,0
chr10	12756687	.	AT	A	10050.76	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=5.428;DP=512;FS=9.681;HRun=9;HaplotypeScore=56.1777;InbreedingCoeff=0.9363;MQ=77.86;MQ0=0;MQRankSum=-2.847;QD=23.43;ReadPosRankSum=1.565;VQSLOD=5.4494;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:90.24:0,90,1017	1/1:1,5:6:12.01:110,12,0	0/0:16,0:14:10.91:0,11,235	0/0:15,0:15:13.88:0,14,275	1/1:3,29:32:86.99:786,87,0	1/1:1,22:23:63.03:576,63,0	1/1:1,13:14:36.02:330,36,0	1/1:6,21:27:62.98:566,63,0	1/1:0,10:10:27.01:247,27,0	1/1:0,17:17:51:456,51,0	1/1:1,17:18:51.03:467,51,0	1/1:1,11:12:33.02:302,33,0	1/1:2,15:17:38.91:357,39,0	1/1:0,10:10:27.01:247,27,0	1/1:2,17:19:48.02:439,48,0	1/1:0,14:14:39.02:357,39,0	1/1:0,21:21:60.03:549,60,0	1/1:1,13:14:38.93:341,39,0	1/1:7,15:22:44.99:405,45,0	1/1:1,24:25:60.02:549,60,0	1/1:2,9:11:27.01:247,27,0	1/1:3,17:20:56.95:511,57,0	1/1:1,16:17:42.02:384,42,0	1/1:1,14:15:39.02:357,39,0	0/0:19,0:19:54.15:0,54,615	1/1:1,21:22:60.03:549,60,0	1/1:2,24:26:69:625,69,0	1/1:5,12:17:4.42:295,4,0
chr10	12759194	.	G	GT	6063.24	PASS	AB=0.700;AC=39;AF=0.696;AN=56;BaseQRankSum=1.460;DP=542;FS=2.655;HRun=10;HaplotypeScore=70.3182;InbreedingCoeff=0.5469;MQ=59.53;MQ0=5;MQRankSum=0.493;QD=15.01;ReadPosRankSum=3.666;VQSLOD=5.4343;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:47:57.82:0,58,583	0/1:2,9:10:6.58:142,0,7	0/0:24,0:20:30.23:0,30,203	0/0:10,0:8:14.91:0,15,115	0/1:5,9:14:26.91:140,0,27	0/1:4,11:16:16.29:208,0,16	1/1:5,16:21:11.45:327,11,0	0/1:27,2:29:22.85:23,0,253	1/1:5,11:15:11.44:321,11,0	1/1:3,15:18:42.06:429,42,0	1/1:9,4:11:12.02:119,12,0	1/1:3,15:18:11.53:327,12,0	1/1:8,19:27:23.48:455,23,0	1/1:2,11:14:18.05:192,18,0	1/1:5,21:26:29.50:519,30,0	1/1:5,15:20:33.08:352,33,0	1/1:5,24:30:1.68:412,2,0	1/1:2,19:22:42.09:441,42,0	0/0:21,1:19:12.94:0,13,313	0/1:12,3:15:4.94:5,0,169	0/0:19,0:18:32.92:0,33,271	1/1:1,6:7:11.86:110,12,0	1/1:3,4:8:8.89:79,9,0	1/1:2,26:31:62.66:618,63,0	0/0:12,0:12:26.95:0,27,222	1/1:3,13:16:36.04:364,36,0	1/1:6,13:19:27.07:288,27,0	1/1:3,8:11:18.05:192,18,0
chr10	12759537	.	AGCGCGCGC	A	9134.59	PASS	AC=34;AF=0.654;AN=52;BaseQRankSum=10.986;DP=270;FS=0.000;HRun=0;HaplotypeScore=79.0050;InbreedingCoeff=0.8297;MQ=49.33;MQ0=1;MQRankSum=-10.959;QD=55.36;ReadPosRankSum=5.729;VQSLOD=4.2015;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:12:27.09:0,27,1132	1/1:0,5:5:6.02:172,6,0	0/0:2,0:2:2.94:0,3,18	./.	1/1:2,6:7:2.97:20,3,0	0/0:6,0:6:8.99:0,9,216	0/0:19,0:19:57.18:0,57,2289	0/0:14,0:14:24.08:0,24,887	1/1:0,5:5:12.04:344,12,0	1/1:1,8:9:24.08:617,24,0	1/1:1,3:3:0.47:1,0,0	1/1:0,13:12:30.10:803,30,0	1/1:1,9:10:24.08:687,24,0	1/1:1,13:14:42.14:1151,42,0	1/1:1,6:7:21.07:592,21,0	1/1:0,6:5:12.04:344,12,0	1/1:2,19:21:48.16:1304,48,0	1/1:3,15:18:36.12:1033,36,0	0/0:12,0:11:30.10:0,30,1319	0/0:1,0:1:3.01:0,3,127	0/0:29,0:28:63.17:0,63,2515	1/1:0,5:4:9.03:166,9,0	./.	1/1:2,13:15:18.06:508,18,0	0/0:6,0:6:12.04:0,12,488	1/1:2,5:6:15.05:422,15,0	1/1:0,12:12:24.08:632,24,0	1/1:1,4:6:12.04:340,12,0
chr10	12760402	.	GAA	G	7416.38	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=6.220;DP=611;FS=3.396;HRun=14;HaplotypeScore=101.4814;InbreedingCoeff=0.9270;MQ=65.81;MQ0=3;MQRankSum=0.061;QD=14.05;ReadPosRankSum=4.706;VQSLOD=4.1946;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:49:77.66:0,78,1146	1/1:2,9:11:20.96:187,21,0	0/0:7,0:5:2.40:0,2,9	0/0:12,0:11:10.41:0,10,93	1/1:4,18:24:47.34:403,47,0	1/1:3,0:17:38.40:166,38,0	1/1:4,0:18:35.12:150,35,0	1/1:5,0:18:32.55:145,33,0	1/1:0,24:25:38.91:408,39,0	1/1:4,8:14:29.47:246,29,0	1/1:5,23:27:22.91:383,23,0	1/1:3,17:20:33:305,33,0	1/1:3,15:20:35.48:301,35,0	1/1:4,24:27:46.78:489,47,0	1/1:11,16:27:32.69:289,33,0	1/1:6,20:26:44.67:400,45,0	1/1:4,18:26:15.18:312,15,0	1/1:1,17:21:44.45:385,44,0	1/1:8,0:20:31.01:133,31,0	1/1:2,0:23:54.77:248,55,0	1/1:7,1:25:30.40:146,30,0	1/1:3,12:16:26.95:250,27,0	1/1:4,16:23:26.34:257,26,0	1/1:5,23:30:56.49:496,56,0	0/0:15,0:15:38.60:0,39,496	1/1:3,27:31:77.65:699,78,0	1/1:2,17:19:42.01:389,42,0	1/1:0,7:10:29.26:230,29,0
chr10	12761938	.	GAGA	G	5517.14	PASS	AB=0.781;AC=22;AF=0.407;AN=54;BaseQRankSum=14.459;DP=916;FS=10.718;HRun=0;HaplotypeScore=95.7082;InbreedingCoeff=-0.7054;MQ=44.48;MQ0=70;MQRankSum=-10.353;QD=7.07;ReadPosRankSum=4.561;VQSLOD=2.7786;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:25:45.13:0,45,989	0/1:12,7:18:99:215,0,647	0/0:9,0:1:3.01:0,3,69	./.	0/1:37,15:50:99:246,0,1059	0/1:29,19:45:99:485,0,1284	0/1:20,7:16:87.15:87,0,212	0/1:26,7:17:99:249,0,356	0/1:29,6:33:99:132,0,1305	0/1:28,13:36:99:531,0,1419	0/1:35,8:41:99:126,0,1514	0/1:15,6:20:99:128,0,410	0/1:20,9:26:99:171,0,582	0/1:27,9:36:99:243,0,1167	0/0:22,0:22:27.09:0,27,620	0/0:32,0:32:53.97:0,54,1121	0/0:33,0:24:32.58:0,33,598	0/1:31,7:34:99:287,0,865	0/1:19,7:18:99:237,0,612	0/1:35,14:42:99:375,0,1285	0/1:29,8:30:99:306,0,902	0/1:30,11:39:99:107,0,871	0/1:29,11:39:99:176,0,1188	0/1:23,9:30:99:259,0,826	0/1:16,13:22:99:271,0,531	0/1:26,14:37:99:522,0,1535	0/1:35,10:42:99:238,0,1237	0/1:11,8:16:99:128,0,454
chr10	12771749	.	A	AG	22168.11	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=4.418;DP=673;FS=0.391;HRun=1;HaplotypeScore=109.2094;InbreedingCoeff=0.9899;MQ=79.60;MQ0=0;MQRankSum=-6.330;QD=40.09;ReadPosRankSum=3.966;VQSLOD=4.7253;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,147,2028	1/1:1,5:5:12.04:192,12,0	0/0:21,0:21:57.14:0,57,698	0/0:30,0:29:69.15:0,69,844	1/1:2,21:23:54.18:859,54,0	1/1:0,17:17:42.14:671,42,0	1/1:0,25:25:66.23:1054,66,0	1/1:1,35:36:99:1640,105,0	1/1:2,23:25:51.17:815,51,0	1/1:0,18:18:54.18:855,54,0	1/1:0,14:14:33.11:526,33,0	1/1:0,29:28:72.25:1151,72,0	1/1:0,18:18:45.15:718,45,0	1/1:1,24:25:63.21:1007,63,0	1/1:0,20:20:45.15:719,45,0	1/1:0,20:20:57.19:911,57,0	1/1:1,37:38:96.33:1534,96,0	1/1:0,33:33:78.27:1247,78,0	1/1:2,13:15:39.13:623,39,0	1/1:0,21:21:60.20:958,60,0	1/1:1,41:42:99:1918,120,0	1/1:1,16:17:39.13:622,39,0	1/1:1,12:13:27.09:430,27,0	1/1:2,26:28:66.23:1055,66,0	0/0:14,0:14:39.06:0,39,521	1/1:0,23:23:69.23:1085,69,0	1/1:1,35:36:78.10:1242,78,0	1/1:0,11:11:20.91:335,21,0
chr10	12772582	.	G	GA	12866.07	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-0.461;DP=495;FS=6.308;HRun=8;HaplotypeScore=69.3507;InbreedingCoeff=0.9505;MQ=72.99;MQ0=0;MQRankSum=-2.484;QD=28.91;ReadPosRankSum=1.915;VQSLOD=5.1052;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:36.02:0,36,329	1/1:0,5:5:15.04:171,15,0	0/0:14,0:14:26.99:0,27,247	0/0:8,0:8:4.50:0,5,100	1/1:3,23:26:63.10:697,63,0	1/1:5,26:32:69.07:776,69,0	1/1:0,12:12:33.10:381,33,0	1/1:3,28:31:84.18:926,84,0	1/1:2,18:20:58.88:641,59,0	1/1:3,15:18:48.13:542,48,0	1/1:5,16:21:54.14:612,54,0	1/1:1,8:9:24.07:277,24,0	1/1:3,15:18:39.11:448,39,0	1/1:1,16:17:42.12:484,42,0	1/1:2,5:6:18.05:207,18,0	1/1:0,18:18:51.15:588,51,0	1/1:0,27:27:81.24:947,81,0	1/1:5,17:22:54.12:604,54,0	1/1:6,20:26:37.92:655,38,0	1/1:4,23:27:77.56:853,78,0	1/1:2,11:13:27.08:312,27,0	1/1:2,14:16:45.11:506,45,0	1/1:4,17:21:51.62:590,52,0	1/1:2,6:8:18.05:208,18,0	0/0:12,0:12:36:0,36,324	1/1:1,14:15:39.12:450,39,0	1/1:5,17:21:48.14:549,48,0	1/1:4,10:14:42.06:441,42,0
chr10	12772645	.	G	GA	4909.77	PASS	AB=0.898;AC=40;AF=0.714;AN=56;BaseQRankSum=-1.687;DP=581;FS=1.302;HRun=14;HaplotypeScore=83.7242;InbreedingCoeff=0.3661;MQ=67.84;MQ0=3;MQRankSum=1.592;QD=10.08;ReadPosRankSum=-0.609;VQSLOD=4.2325;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:17,1:18:4.65:5,0,175	1/1:2,7:10:23.84:199,24,0	0/1:29,0:19:0.79:1,0,31	0/0:17,0:9:8.24:0,8,52	1/1:21,4:26:25.76:306,26,0	0/0:26,0:28:26.91:0,27,263	0/1:12,1:14:32.22:32,0,125	0/0:33,0:34:42.80:0,43,280	1/1:9,11:21:12.18:333,12,0	1/1:12,8:21:12.19:328,12,0	1/1:10,7:18:23.91:282,24,0	0/1:10,4:18:3.77:200,0,4	1/1:10,5:16:13.55:226,14,0	1/1:5,4:11:20.68:160,21,0	1/1:2,18:20:26.68:213,27,0	1/1:11,4:16:32.83:273,33,0	1/1:18,5:25:39.27:393,39,0	1/1:5,25:30:28.74:375,29,0	0/1:20,1:21:27.50:28,0,183	0/1:31,2:34:49.27:49,0,217	0/0:14,0:14:23.73:0,24,146	1/1:6,5:11:7.18:146,7,0	1/1:19,7:29:40.91:359,41,0	1/1:6,2:8:11.84:93,12,0	0/1:18,1:20:10.45:10,0,176	1/1:11,8:20:23.31:283,23,0	0/1:14,7:22:21.32:199,0,21	1/1:6,16:26:34.66:416,35,0
chr10	12776121	.	AAAAAAAC	A	4202.77	PASS	AB=0.976;AC=23;AF=0.411;AN=56;BaseQRankSum=11.790;DP=531;FS=11.270;HRun=0;HaplotypeScore=129.7014;InbreedingCoeff=-0.4414;MQ=51.85;MQ0=18;MQRankSum=-10.393;QD=12.89;ReadPosRankSum=12.613;VQSLOD=-0.7231;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:50.12:0,50,1211	0/1:7,1:8:24.54:200,0,25	0/0:57,0:14:20.82:0,21,392	0/0:48,0:11:18.14:0,18,471	0/1:26,0:26:99:270,0,139	0/1:18,0:18:99:132,0,104	1/1:10,0:10:20.68:208,21,0	0/1:38,0:39:24.10:24,0,442	0/1:12,3:15:73.21:294,0,73	0/1:20,0:19:99:115,0,207	0/1:15,0:14:77.85:213,0,78	0/1:14,0:14:56.36:96,0,56	0/1:14,2:16:21.86:424,0,22	0/1:11,0:11:40.89:225,0,41	0/1:15,1:16:16.46:417,0,16	0/1:14,0:13:69.44:236,0,69	0/1:13,0:13:82.61:83,0,109	0/1:8,0:8:47.26:99,0,47	0/0:25,0:24:3.75:0,4,294	0/0:24,0:24:37.88:0,38,300	0/0:7,0:7:15.55:0,16,112	0/1:13,0:13:70.70:197,0,71	0/1:14,0:14:61.99:156,0,62	0/1:8,0:8:60.41:60,0,61	0/0:22,0:21:51.15:0,51,1129	0/1:16,0:15:99:123,0,105	1/1:23,1:24:4.50:555,5,0	0/1:8,0:8:18.27:76,0,18
chr10	12777275	.	C	CA	14121.12	PASS	AB=1.000;AC=49;AF=0.875;AN=56;BaseQRankSum=-0.592;DP=561;FS=2.348;HRun=7;HaplotypeScore=77.1551;InbreedingCoeff=0.8789;MQ=67.45;MQ0=0;MQRankSum=-1.875;QD=28.47;ReadPosRankSum=1.964;VQSLOD=5.5432;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:96.15:0,96,923	1/1:2,8:10:24.07:290,24,0	0/0:13,0:13:20.70:0,21,175	0/1:17,0:15:3.69:4,0,135	1/1:5,21:26:63.19:761,63,0	1/1:1,16:17:48.15:580,48,0	1/1:3,14:17:39.12:471,39,0	1/1:4,21:25:60.17:712,60,0	1/1:2,27:29:63.19:761,63,0	1/1:2,18:20:54.06:598,54,0	1/1:2,17:19:51.16:616,51,0	1/1:0,21:21:63.19:761,63,0	1/1:1,20:21:48.15:580,48,0	1/1:1,14:15:36.11:435,36,0	1/1:2,17:19:48.15:580,48,0	1/1:3,14:17:39.12:471,39,0	1/1:4,20:24:48.15:580,48,0	1/1:2,22:24:63.15:745,63,0	1/1:3,17:20:51.16:616,51,0	1/1:2,22:24:63.13:741,63,0	1/1:2,4:6:12.04:145,12,0	1/1:3,21:24:60.10:704,60,0	1/1:2,16:18:48.15:580,48,0	1/1:3,19:22:42.13:507,42,0	0/0:17,0:16:45.07:0,45,434	1/1:4,20:24:60.18:725,60,0	1/1:1,25:27:66.20:797,66,0	1/1:0,10:10:30.09:362,30,0
chr10	12778747	.	TTC	T	7310.29	PASS	AB=0.981;AC=45;AF=0.804;AN=56;BaseQRankSum=-1.759;DP=579;FS=2.317;HRun=0;HaplotypeScore=111.3847;InbreedingCoeff=0.3292;MQ=60.03;MQ0=14;MQRankSum=1.595;QD=14.86;ReadPosRankSum=4.186;VQSLOD=4.8557;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:45:68.43:0,68,1281	1/1:14,0:12:7.08:237,7,0	0/0:18,0:11:1.62:0,2,55	0/1:32,0:23:8.78:9,0,130	1/1:17,0:17:23.63:234,24,0	1/1:24,2:25:36.06:434,36,0	1/1:3,14:17:9.03:114,9,0	1/1:16,14:29:7.81:477,8,0	1/1:22,0:22:21.22:393,21,0	0/1:20,1:20:38.87:258,0,39	1/1:14,1:15:10.85:149,11,0	1/1:12,0:12:5.52:186,6,0	1/1:9,2:10:11.53:123,12,0	0/1:12,0:11:28.50:41,0,28	1/1:15,0:14:21.03:249,21,0	1/1:16,0:15:28:322,28,0	1/1:26,0:24:28.61:556,29,0	1/1:20,0:19:28.10:488,28,0	1/1:16,2:16:5.42:109,5,0	1/1:16,2:15:4.04:263,4,0	1/1:20,3:23:32.99:349,33,0	1/1:17,0:16:32.90:343,33,0	1/1:19,0:19:44.55:489,45,0	1/1:27,1:26:47.70:504,48,0	0/0:21,0:18:17.88:0,18,321	0/1:27,0:26:56.60:372,0,57	0/1:18,1:19:0.47:219,0,0	1/1:17,0:16:33.79:391,34,0
chr10	12778815	.	GCT	G	12349.75	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=5.409;DP=428;FS=9.768;HRun=0;HaplotypeScore=101.5828;InbreedingCoeff=0.9747;MQ=78.23;MQ0=5;MQRankSum=-7.348;QD=38.96;ReadPosRankSum=3.149;VQSLOD=6.7712;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:93.30:0,93,1704	1/1:0,5:5:9.03:132,9,0	0/0:34,0:23:60.59:0,61,1118	0/0:38,0:26:72.24:0,72,1221	1/1:0,8:8:21.07:309,21,0	1/1:1,12:13:33.11:486,33,0	1/1:0,16:17:51.17:751,51,0	1/1:1,13:14:36.09:507,36,0	1/1:0,14:14:36.12:524,36,0	1/1:3,8:10:21.07:309,21,0	1/1:0,10:9:27.09:397,27,0	1/1:0,16:16:45.15:662,45,0	1/1:0,14:14:42.14:618,42,0	1/1:0,13:13:39.13:562,39,0	1/1:1,9:10:27.09:398,27,0	1/1:0,13:13:36.12:530,36,0	1/1:0,23:23:57.19:839,57,0	1/1:0,17:17:45.15:663,45,0	1/1:0,10:10:30.10:442,30,0	1/1:0,17:17:51.17:751,51,0	1/1:0,14:14:36.12:530,36,0	1/1:0,11:11:30.10:442,30,0	1/1:0,5:5:15.05:221,15,0	1/1:1,19:20:42.43:619,42,0	0/0:7,0:7:21.06:0,21,362	1/1:0,18:18:54.17:775,54,0	1/1:0,14:14:36.02:530,36,0	1/1:0,10:10:24.08:353,24,0
chr10	12781458	.	G	GA	6250.34	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=4.981;DP=460;FS=0.000;HRun=7;HaplotypeScore=100.6573;InbreedingCoeff=0.7863;MQ=48.05;MQ0=20;MQRankSum=-9.162;QD=16.94;ReadPosRankSum=-3.668;VQSLOD=3.8318;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:30:69.07:0,69,659	1/1:1,2:3:6.02:72,6,0	0/0:15,0:7:2.96:0,3,29	0/0:16,0:6:5.99:0,6,54	1/1:7,16:23:36.06:417,36,0	1/1:5,14:17:35.13:346,35,0	1/1:8,5:10:11.98:122,12,0	1/1:10,10:14:29.84:309,30,0	1/1:9,2:11:16.58:99,17,0	1/1:13,13:23:29.01:572,29,0	1/1:6,14:19:15.66:310,16,0	1/1:2,6:9:19.92:181,20,0	1/1:15,2:13:8.75:67,9,0	1/1:8,14:20:44.27:480,44,0	1/1:7,10:16:27.07:305,27,0	1/1:0,8:7:12.04:145,12,0	1/1:6,8:15:32.39:347,32,0	1/1:3,3:5:9.03:109,9,0	1/1:2,5:6:15.02:165,15,0	1/1:10,11:21:42.03:413,42,0	1/1:6,1:7:8.22:55,8,0	1/1:8,9:15:17.79:170,18,0	1/1:8,12:17:30.09:362,30,0	1/1:9,9:19:21:226,21,0	0/0:26,0:26:66.10:0,66,637	1/1:4,13:17:45.06:511,45,0	1/1:15,9:23:44.30:397,44,0	1/1:1,3:3:6.02:72,6,0
chr10	12781469	.	C	CAAAAA	9863.44	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=5.455;DP=516;FS=2.589;HRun=8;HaplotypeScore=108.3939;InbreedingCoeff=0.8197;MQ=49.06;MQ0=19;MQRankSum=-6.857;QD=23.82;ReadPosRankSum=-4.056;VQSLOD=1.0824;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:30:77.94:0,78,1266	1/1:0,2:3:9.03:224,9,0	0/0:22,0:9:14.39:0,14,196	0/0:20,0:8:10.50:0,10,165	1/1:12,19:35:51.12:1083,51,0	1/1:16,0:19:26.57:382,27,0	1/1:11,0:9:12.91:176,13,0	1/1:23,0:17:17.85:173,18,0	1/1:12,2:14:29.83:441,30,0	1/1:14,10:27:1.42:943,1,0	1/1:10,12:22:24.67:664,25,0	1/1:12,2:14:27.09:548,27,0	1/1:11,0:8:14.19:142,14,0	1/1:15,2:15:14.70:243,15,0	1/1:7,17:24:11.93:346,12,0	1/1:5,7:14:9.03:259,9,0	1/1:15,0:15:15.84:162,16,0	1/1:5,2:7:20.38:362,20,0	1/1:10,0:8:14.99:145,15,0	1/1:24,0:24:18.89:122,19,0	1/1:5,0:5:5.52:52,6,0	1/1:13,2:14:29.96:459,30,0	1/1:11,12:23:21.01:485,21,0	1/1:12,3:15:28.90:507,29,0	0/0:27,0:27:75.23:0,75,1274	1/1:10,13:24:48.15:1118,48,0	1/1:18,3:21:36.24:594,36,0	1/1:3,2:4:9.03:233,9,0
chr10	12784602	.	A	AG	2754.16	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=0.597;DP=503;FS=8.248;HRun=0;HaplotypeScore=63.4629;InbreedingCoeff=0.8128;MQ=58.89;MQ0=14;MQRankSum=4.488;QD=11.38;ReadPosRankSum=3.103;VQSLOD=3.8363;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:28:64.19:0,64,524	1/1:1,4:5:2.51:32,3,0	0/0:30,0:10:21.54:0,22,220	0/0:22,0:12:7.32:0,7,108	1/1:14,13:26:44.34:305,44,0	0/0:16,0:16:44.93:0,45,326	0/0:15,0:15:39.86:0,40,323	0/0:35,0:34:68.41:0,68,554	0/0:3,12:15:1.55:0,2,4	1/1:4,10:13:18.07:180,18,0	1/1:17,1:18:39.80:317,40,0	1/1:15,0:15:5.79:139,6,0	1/1:3,10:14:2.05:16,2,0	1/1:16,0:16:36.86:285,37,0	1/1:17,0:17:32.87:288,33,0	1/1:15,0:15:4.99:159,5,0	1/1:19,0:15:35.23:251,35,0	1/1:9,0:7:3.37:132,3,0	0/0:23,0:20:43.61:0,44,361	0/0:22,0:22:53.91:0,54,389	0/0:13,0:12:18.75:0,19,139	1/1:10,3:13:20.34:161,20,0	1/1:5,11:15:7.96:92,8,0	0/0:11,13:22:0.47:0,0,1	0/0:16,0:16:34.27:0,34,274	1/1:17,0:17:14.98:223,15,0	1/1:19,0:19:21.70:252,22,0	1/1:8,0:8:17.38:128,17,0
chr10	12787720	.	CG	C	10464.07	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=7.258;DP=526;FS=0.000;HRun=3;HaplotypeScore=58.0268;InbreedingCoeff=0.9921;MQ=88.61;MQ0=0;MQRankSum=-7.421;QD=33.33;ReadPosRankSum=3.393;VQSLOD=5.2361;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:84.28:0,84,1208	1/1:0,5:5:11.92:148,12,0	0/0:23,0:23:66.15:0,66,871	0/0:22,0:22:51.17:0,51,718	1/1:2,9:11:33.10:407,33,0	0/0:24,0:24:69.23:0,69,992	0/0:18,0:18:48.15:0,48,673	0/0:21,0:22:57.17:0,57,786	1/1:1,19:20:51.16:632,51,0	1/1:1,13:14:33.10:408,33,0	1/1:2,9:11:30.06:355,30,0	1/1:0,24:24:63.20:781,63,0	1/1:0,13:13:39.12:483,39,0	1/1:1,15:16:45.14:557,45,0	1/1:0,33:33:90.28:1116,90,0	1/1:0,24:24:69.22:855,69,0	1/1:3,36:39:99:1301,105,0	1/1:0,19:19:54.17:669,54,0	0/0:19,0:19:54.18:0,54,774	0/0:13,0:13:36.10:0,36,498	0/0:30,0:30:84.27:0,84,1192	1/1:0,10:10:21.07:260,21,0	1/1:0,12:12:33.10:409,33,0	1/1:0,14:14:39.12:483,39,0	0/0:12,0:12:33.11:0,33,475	1/1:0,19:19:51.16:632,51,0	1/1:2,23:25:63.20:780,63,0	1/1:0,5:5:15.05:186,15,0
chr10	12788134	.	CT	C	18994.11	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=5.149;DP=654;FS=4.058;HRun=2;HaplotypeScore=71.4784;InbreedingCoeff=0.9986;MQ=92.10;MQ0=0;MQRankSum=-6.067;QD=35.11;ReadPosRankSum=4.214;VQSLOD=5.4499;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,114,1706	1/1:0,8:8:21.07:273,21,0	0/0:24,0:24:69.21:0,69,959	0/0:28,0:28:81.07:0,81,1059	1/1:0,30:30:81.26:1051,81,0	1/1:1,19:20:51.17:662,51,0	1/1:0,18:18:45.15:584,45,0	1/1:4,26:30:78.23:986,78,0	1/1:0,12:12:33.11:428,33,0	1/1:1,27:28:81.26:1051,81,0	1/1:0,18:18:45.15:584,45,0	1/1:0,24:24:72.19:915,72,0	1/1:0,28:28:69.22:894,69,0	1/1:0,17:17:51.17:662,51,0	1/1:0,32:32:87.28:1129,87,0	1/1:0,28:28:75.24:973,75,0	1/1:1,27:28:69.22:896,69,0	1/1:0,14:14:33.11:428,33,0	1/1:0,20:20:60.18:763,60,0	1/1:1,16:17:45.15:584,45,0	1/1:1,22:23:63.20:818,63,0	1/1:0,24:24:69.22:896,69,0	1/1:0,23:23:54.17:701,54,0	1/1:0,25:25:72.19:915,72,0	0/0:23,0:23:69.21:0,69,996	1/1:0,32:32:96.31:1246,96,0	1/1:0,32:32:90.19:1166,90,0	1/1:0,10:10:30.10:389,30,0
chr10	12792258	.	GGGT	G	168.55	PASS	AB=0.914;AC=11;AF=0.196;AN=56;BaseQRankSum=7.829;DP=327;FS=59.193;HRun=0;HaplotypeScore=56.4776;InbreedingCoeff=-0.2512;MQ=78.06;MQ0=0;MQRankSum=-1.546;QD=1.44;ReadPosRankSum=6.902;VQSLOD=-0.7087;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:26.85:0,27,299	0/1:7,0:7:1.48:1,0,81	0/0:24,0:21:40.87:0,41,515	0/1:11,0:11:13.43:13,0,159	0/0:11,0:11:6.18:0,6,155	0/0:13,0:13:26.53:0,27,286	0/0:13,0:13:8.58:0,9,160	0/0:19,1:20:42:0,42,386	0/0:5,0:5:1.59:0,2,39	0/1:7,1:8:11.81:12,0,173	0/0:7,1:8:8.77:0,9,118	0/0:16,1:17:3.52:0,4,216	0/0:6,1:7:0.50:0,1,85	0/1:15,1:16:4.36:4,0,219	0/0:7,1:8:16.43:0,16,110	0/1:13,2:15:99:100,0,136	0/1:15,1:16:45.99:46,0,146	0/0:15,0:15:28.82:0,29,284	0/0:11,0:11:26.87:0,27,212	0/0:6,1:7:14.84:0,15,133	0/0:11,0:11:20.93:0,21,164	0/1:5,0:5:8.97:9,0,75	0/1:8,2:10:10.83:11,0,160	0/0:10,0:10:16.13:0,16,176	0/0:12,0:12:23.85:0,24,241	0/1:8,1:9:50.13:50,0,103	0/1:14,0:14:4.60:5,0,172	0/1:3,3:6:14.35:48,0,14
chr10	12792395	.	T	TC	10193.49	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-12.119;DP=571;FS=5.879;HRun=6;HaplotypeScore=57.0785;InbreedingCoeff=0.9838;MQ=90.57;MQ0=0;MQRankSum=-3.819;QD=31.85;ReadPosRankSum=5.114;VQSLOD=5.0323;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,108,1101	1/1:1,2:3:6.02:75,6,0	0/0:22,0:22:41.11:0,41,399	0/0:27,0:26:63.04:0,63,618	1/1:1,9:10:24.08:302,24,0	0/0:17,0:17:42.09:0,42,428	0/0:19,0:18:48.05:0,48,473	0/0:35,0:35:57.09:0,57,576	1/1:0,16:17:48.05:581,48,0	1/1:3,16:19:51.16:632,51,0	1/1:0,12:12:30.10:377,30,0	1/1:2,24:26:57.18:716,57,0	1/1:3,15:18:45.13:554,45,0	1/1:1,17:18:54.17:674,54,0	1/1:3,17:20:51.16:641,51,0	1/1:0,18:18:51.16:642,51,0	1/1:0,29:29:81.26:1019,81,0	1/1:1,21:22:51.16:642,51,0	0/0:19,0:19:42.07:0,42,420	0/0:13,0:13:36.08:0,36,367	0/0:43,0:43:99:0,105,1070	1/1:1,9:10:30.09:370,30,0	1/1:2,13:15:36.11:450,36,0	1/1:3,31:34:81.26:1019,81,0	0/0:14,0:14:42.07:0,42,420	1/1:4,19:23:54.16:668,54,0	1/1:3,9:12:27.09:340,27,0	1/1:1,13:14:39.12:491,39,0
chr10	12793106	.	TTC	T	2093.13	PASS	AB=0.995;AC=29;AF=0.518;AN=56;BaseQRankSum=13.516;DP=599;FS=0.318;HRun=0;HaplotypeScore=160.9282;InbreedingCoeff=0.4819;MQ=62.67;MQ0=5;MQRankSum=-5.982;QD=5.90;ReadPosRankSum=6.426;VQSLOD=2.8820;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:77.37:0,77,1185	1/1:11,0:11:4.15:83,4,0	0/0:25,0:15:6.93:0,7,398	0/0:26,1:20:44.84:0,45,501	0/1:23,0:23:59.35:116,0,59	0/0:22,0:22:36.28:0,36,162	0/0:20,0:20:34.44:0,34,147	0/0:34,0:34:96.23:0,96,1280	1/1:24,1:25:13.33:214,13,0	1/1:20,1:21:18.59:175,19,0	0/1:19,0:17:8.54:103,0,9	1/1:18,0:17:19.57:165,20,0	0/1:21,0:21:0.53:123,0,1	1/1:22,1:23:11.32:157,11,0	1/1:19,0:19:6.14:147,6,0	1/1:17,0:17:18.73:130,19,0	0/1:25,1:26:99:122,0,120	0/1:21,0:20:30.29:89,0,30	0/0:28,0:28:74.07:0,74,1081	0/0:19,0:18:50.81:0,51,713	0/0:14,0:14:42.04:0,42,639	1/1:5,0:5:10.99:36,11,0	1/1:15,0:15:12.64:101,13,0	1/1:19,0:18:17.69:138,18,0	0/0:27,0:27:78.18:0,78,1180	0/1:30,0:29:21.34:141,0,21	0/1:26,0:26:9.94:140,0,10	1/1:16,0:16:34.98:116,35,0
chr10	12793108	.	CTT	C	9337.67	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=11.205;DP=596;FS=2.568;HRun=12;HaplotypeScore=137.7274;InbreedingCoeff=0.9903;MQ=62.74;MQ0=5;MQRankSum=-8.865;QD=23.94;ReadPosRankSum=4.846;VQSLOD=3.6624;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:29:81.11:0,81,1088	1/1:1,10:11:30.06:305,30,0	0/0:26,0:15:10.70:0,11,394	0/0:26,0:21:34.81:0,35,460	1/1:6,17:23:54.07:538,54,0	1/1:4,0:22:49.39:213,49,0	1/1:4,0:20:41.15:178,41,0	0/0:32,0:34:69.19:0,69,954	1/1:4,19:24:65.84:652,66,0	1/1:3,18:21:57.11:579,57,0	1/1:3,14:15:39.06:397,39,0	1/1:1,17:17:48.08:488,48,0	1/1:3,18:21:57.06:568,57,0	1/1:3,19:23:62.86:621,63,0	1/1:4,15:19:51.10:519,51,0	1/1:1,16:17:48.09:488,48,0	1/1:11,15:26:51.01:517,51,0	1/1:4,17:20:42.09:427,42,0	0/0:27,0:28:62.35:0,62,850	0/0:18,0:18:44.64:0,45,635	0/0:13,0:14:41.63:0,42,590	1/1:0,5:5:15.03:153,15,0	1/1:1,13:15:41.82:408,42,0	1/1:2,17:18:45.04:446,45,0	0/0:27,0:27:75.24:0,75,1081	1/1:4,23:27:71.89:714,72,0	1/1:3,21:24:66.14:669,66,0	1/1:0,16:16:45.10:458,45,0
chr10	12793141	.	G	GGAGGTCA	28717.94	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=11.996;DP=620;FS=9.581;HRun=0;HaplotypeScore=198.3005;InbreedingCoeff=0.9877;MQ=67.47;MQ0=0;MQRankSum=-15.491;QD=68.21;ReadPosRankSum=3.855;VQSLOD=4.4815;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:72.23:0,72,1634	1/1:7,5:12:18.06:657,18,0	0/0:29,0:28:57:0,57,1195	0/0:23,0:21:26.53:0,27,623	1/1:13,10:27:45.14:1537,45,0	1/1:19,0:19:33.11:1071,33,0	1/1:13,0:13:33.11:1077,33,0	0/0:27,0:27:51.16:0,51,1105	1/1:9,18:27:72.21:2509,72,0	1/1:14,12:26:63:1678,63,0	1/1:6,10:17:30.10:1103,30,0	1/1:5,13:19:42.14:1518,42,0	1/1:10,17:30:72.22:2459,72,0	1/1:12,11:24:45.13:1448,45,0	1/1:4,18:23:57.20:2142,57,0	1/1:7,14:22:45.14:1604,45,0	1/1:9,12:23:33.11:1241,33,0	1/1:10,6:16:27.04:865,27,0	0/0:20,0:20:42.13:0,42,882	0/0:22,0:22:57.20:0,57,1340	0/0:22,0:22:63.22:0,63,1492	1/1:9,8:18:33.10:1105,33,0	1/1:11,7:18:24.08:902,24,0	1/1:16,7:23:24.08:893,24,0	0/0:23,0:23:48.16:0,48,1138	1/1:15,15:34:90.16:2612,90,0	1/1:14,9:24:63.13:1959,63,0	1/1:2,3:5:9.03:339,9,0
chr10	12793143	.	A	AGGTCAGG	23990.25	PASS	AB=0.996;AC=29;AF=0.518;AN=56;BaseQRankSum=10.582;DP=621;FS=5.940;HRun=0;HaplotypeScore=212.3848;InbreedingCoeff=0.2513;MQ=66.68;MQ0=0;MQRankSum=-16.051;QD=56.58;ReadPosRankSum=8.638;VQSLOD=3.7726;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:87.16:0,87,1888	0/1:13,0:13:7.90:523,0,8	0/0:28,0:27:62.23:0,62,1389	0/0:21,0:20:39.04:0,39,790	1/1:27,0:27:20.15:1255,20,0	1/1:7,11:18:42.05:1354,42,0	1/1:7,12:21:51.12:1801,51,0	0/0:28,0:28:72.20:0,72,1431	1/1:27,0:27:14.53:1996,15,0	0/1:25,0:25:14.55:1173,0,15	1/1:17,0:17:15.12:908,15,0	0/1:20,0:20:11.76:1214,0,12	1/1:29,0:29:45.23:1985,45,0	0/1:25,0:25:80.81:1096,0,81	1/1:22,0:22:20.24:1755,20,0	0/1:23,0:22:34.34:1272,0,34	0/1:23,0:23:3.86:998,0,4	0/1:16,0:16:85.37:641,0,85	0/0:20,0:20:57.15:0,57,1147	0/0:23,0:23:57.20:0,57,1433	0/0:21,0:21:63.22:0,63,1585	0/1:18,0:18:35.84:859,0,36	0/1:17,0:17:11.84:729,0,12	0/1:21,0:22:55.85:735,0,56	0/0:23,0:23:57.16:0,57,1285	1/1:33,0:33:24.40:1914,24,0	1/1:23,0:23:29.56:1517,30,0	0/1:5,0:5:12.96:268,0,13
chr10	12795194	.	T	TC	11214.07	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-12.088;DP=635;FS=6.278;HRun=7;HaplotypeScore=62.5996;InbreedingCoeff=0.9975;MQ=83.72;MQ0=0;MQRankSum=-3.683;QD=28.61;ReadPosRankSum=5.939;VQSLOD=5.0115;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:36:98.83:0,99,910	1/1:1,7:8:18.06:217,18,0	0/0:27,0:27:38.68:0,39,434	0/0:19,0:18:45.46:0,45,403	1/1:1,16:17:39.12:471,39,0	0/0:11,0:11:33.05:0,33,318	0/0:27,0:27:69.02:0,69,644	0/0:31,0:31:66.09:0,66,633	1/1:3,12:15:36.11:435,36,0	1/1:4,13:17:39.12:471,39,0	1/1:5,15:20:42.13:507,42,0	1/1:1,30:31:75.23:906,75,0	1/1:4,27:31:66.20:797,66,0	1/1:3,25:28:72.22:870,72,0	1/1:4,28:32:63.19:760,63,0	1/1:3,25:28:69.21:828,69,0	1/1:5,16:21:45.14:544,45,0	1/1:0,22:22:60.18:725,60,0	0/0:19,0:19:42.05:0,42,405	0/0:22,0:22:57.09:0,57,549	0/0:24,0:24:69.09:0,69,656	1/1:2,16:18:42.12:498,42,0	1/1:1,16:17:45.14:544,45,0	1/1:3,31:34:87.27:1051,87,0	0/0:26,0:26:57.05:0,57,542	1/1:3,15:18:42.13:506,42,0	1/1:2,26:28:72.22:869,72,0	1/1:0,7:7:18.06:217,18,0
chr10	12795752	.	GCTGCTT	G	1182.27	PASS	AB=1.000;AC=23;AF=0.479;AN=48;BaseQRankSum=3.142;DP=806;FS=1.546;HRun=0;HaplotypeScore=168.1046;InbreedingCoeff=0.0402;MQ=71.05;MQ0=9;MQRankSum=-0.035;QD=2.32;ReadPosRankSum=-1.390;VQSLOD=2.7561;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:7.25:0,7,102	1/1:7,3:10:6.02:106,6,0	./.	./.	0/1:23,0:22:36.82:37,0,46	0/1:28,0:26:0.56:1,0,68	0/1:33,0:30:0:0,0,0	./.	0/1:28,0:27:22.68:88,0,23	0/0:28,0:28:6.02:0,6,88	0/0:16,0:16:5.99:0,6,50	0/1:42,0:41:43.21:95,0,43	0/1:25,0:25:40.97:41,0,62	1/1:30,0:30:16.93:113,17,0	0/1:43,0:43:99:122,0,115	1/1:32,0:32:5.99:179,6,0	0/0:25,0:25:3:0,3,25	0/1:20,0:18:2.98:3,0,52	1/1:18,0:18:6.02:93,6,0	1/1:16,3:19:9.03:153,9,0	1/1:46,0:46:23.90:242,24,0	./.	0/0:19,0:19:3.89:0,4,35	0/1:46,0:45:27.43:27,0,53	0/0:31,0:30:14.81:0,15,184	0/0:29,0:29:12.02:0,12,130	0/1:47,0:47:19.58:20,0,132	0/1:20,0:20:13.93:14,0,97
chr10	12795941	.	TCTTCTG	T	1505.78	PASS	AB=0.907;AC=6;AF=0.111;AN=54;BaseQRankSum=7.690;DP=889;FS=1.811;HRun=0;HaplotypeScore=140.5689;InbreedingCoeff=0.6858;MQ=44.12;MQ0=145;MQRankSum=1.510;QD=12.98;ReadPosRankSum=-3.602;VQSLOD=2.2841;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:34:63.64:0,64,833	0/0:13,0:12:33.03:0,33,439	./.	0/0:51,0:1:3.01:0,3,37	0/0:32,0:22:51.14:0,51,748	0/0:21,0:19:45.15:0,45,682	0/0:39,0:31:72.23:0,72,985	0/1:27,8:9:70.53:185,0,71	0/0:28,0:27:72.04:0,72,1059	0/0:28,0:25:65.39:0,65,1076	0/0:22,0:19:48.15:0,48,679	0/0:30,0:28:77.39:0,77,1185	0/0:23,0:22:40.72:0,41,741	0/0:19,0:13:39.12:0,39,628	0/0:40,0:37:99:0,102,1618	0/0:34,0:34:93.31:0,93,1475	0/0:50,0:43:99:0,110,1515	0/0:29,0:24:52.79:0,53,919	1/1:12,13:16:42.03:484,42,0	1/1:14,23:27:15.04:558,15,0	0/1:19,0:15:0.05:412,0,0	0/0:25,0:21:45.32:0,45,678	0/0:26,0:18:48.15:0,48,709	0/0:38,0:32:85.06:0,85,1263	0/0:32,0:31:80.81:0,81,1257	0/0:51,0:43:99:0,114,1909	0/0:25,0:24:71.89:0,72,1022	0/0:27,0:24:53.97:0,54,792
chr10	12796017	.	TTTC	T	336.76	PASS	AB=0.640;AC=3;AF=0.054;AN=56;BaseQRankSum=5.564;DP=761;FS=0.000;HRun=0;HaplotypeScore=107.1019;InbreedingCoeff=0.5406;MQ=53.57;MQ0=24;MQRankSum=0.442;QD=7.48;ReadPosRankSum=1.314;VQSLOD=2.5780;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,1:38:13.50:0,13,973	0/0:13,0:13:27.09:0,27,505	0/0:44,0:7:11.14:0,11,115	0/0:30,0:16:6.41:0,6,68	0/0:28,0:28:75.24:0,75,1374	1/1:12,17:27:0.64:311,1,0	0/1:6,9:15:0.83:115,0,1	0/0:27,0:26:36.96:0,37,567	0/0:15,0:15:36.07:0,36,592	0/0:25,0:25:54.18:0,54,1037	0/0:33,0:33:78.26:0,78,1497	0/0:31,0:29:69.18:0,69,1160	0/0:19,0:19:45.13:0,45,835	0/0:21,0:20:45.15:0,45,813	0/0:31,1:32:33.08:0,33,1369	0/0:37,0:36:78.25:0,78,1441	0/0:34,0:34:65.74:0,66,1146	0/0:24,1:24:11.46:0,11,863	0/0:16,0:13:33.11:0,33,589	0/0:27,0:27:42.14:0,42,793	0/0:14,0:15:24.03:0,24,425	0/0:26,0:25:57.18:0,57,1044	0/0:23,0:23:54.10:0,54,973	0/0:35,0:35:81.25:0,81,1478	0/0:33,2:33:27.06:0,27,1228	0/0:32,0:32:69.20:0,69,1212	0/0:40,0:40:84.25:0,84,1504	0/0:13,0:10:9.03:0,9,155
chr10	12798944	.	AATCCAC	A	3708.17	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=10.786;DP=738;FS=2.408;HRun=0;HaplotypeScore=153.1847;InbreedingCoeff=0.9985;MQ=90.24;MQ0=0;MQRankSum=-9.653;QD=46.94;ReadPosRankSum=-2.885;VQSLOD=3.2233;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,151,5256	0/0:12,0:12:36.12:0,36,1218	0/0:31,0:31:90.27:0,90,2726	0/0:29,0:29:81.28:0,81,2537	0/0:27,0:27:81.28:0,81,2769	0/0:22,0:22:60.21:0,60,2075	0/0:32,0:32:87.30:0,87,3091	1/1:4,22:26:66.21:1465,66,0	0/0:29,0:29:84.29:0,84,2959	0/0:29,0:29:84.28:0,84,2872	0/0:10,0:10:30.10:0,30,1069	0/0:31,0:31:90.31:0,90,3124	0/0:19,0:19:54.19:0,54,1852	0/0:36,0:36:99:0,108,3769	0/0:29,0:29:81.27:0,81,2744	0/0:35,0:35:99:0,105,3695	0/0:37,0:37:99:0,108,3691	0/0:28,0:28:78.24:0,78,2647	1/1:3,11:14:33.11:780,33,0	1/1:0,15:15:39.06:804,39,0	1/1:4,20:24:33.11:659,33,0	0/0:26,0:26:72.25:0,72,2554	0/0:16,0:16:48.16:0,48,1712	0/0:40,0:40:99:0,114,3891	0/0:18,0:18:51.18:0,51,1817	0/0:28,0:28:81.27:0,81,2785	0/0:29,0:29:81.28:0,81,2797	0/0:11,0:11:21.07:0,21,704
chr10	12800216	.	G	GGGGGAGAGA	2210.47	PASS	AB=0.725;AC=19;AF=0.339;AN=56;BaseQRankSum=7.032;DP=730;FS=49.031;HRun=0;HaplotypeScore=195.9805;InbreedingCoeff=-0.3612;MQ=56.35;MQ0=15;MQRankSum=-6.313;QD=4.87;ReadPosRankSum=-3.253;VQSLOD=0.6265;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:31,0:34:99:107,0,725	0/1:13,0:12:99:185,0,115	0/0:28,0:8:22.57:0,23,262	0/0:36,0:9:5.40:0,5,133	0/1:7,0:27:99:110,0,171	1/1:3,1:32:5.98:134,6,0	0/1:17,0:13:7.15:100,0,7	0/0:30,0:29:10.72:0,11,914	0/0:13,0:28:8:0,8,489	0/1:10,0:28:99:278,0,414	0/0:7,0:22:18.50:0,19,257	0/1:9,0:30:99:214,0,246	0/1:3,0:27:78.17:78,0,130	0/1:19,0:20:99:116,0,254	0/0:18,0:38:58.26:0,58,949	0/1:8,0:29:86.30:382,0,86	0/1:8,0:20:36.12:36,0,223	0/1:12,0:12:99:104,0,317	0/0:18,0:16:42.06:0,42,638	0/0:27,0:27:48.14:0,48,739	0/0:21,0:21:17.85:0,18,370	0/1:10,0:32:48.69:49,0,280	0/1:2,0:18:33.67:104,0,34	0/1:11,0:23:30.91:31,0,261	0/0:15,0:25:25.48:0,25,425	0/1:11,0:31:99:181,0,565	0/1:9,0:32:99:159,0,382	0/1:27,0:25:1.39:1,0,764
chr10	12800223	.	G	GAC	2260.49	PASS	AB=0.963;AC=17;AF=0.304;AN=56;BaseQRankSum=1.010;DP=732;FS=22.187;HRun=0;HaplotypeScore=120.0811;InbreedingCoeff=0.0565;MQ=54.58;MQ0=18;MQRankSum=-1.525;QD=6.04;ReadPosRankSum=6.180;VQSLOD=1.4226;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:32:41.18:41,0,352	0/1:13,0:12:37.91:38,0,71	0/0:24,0:7:10.35:0,10,100	0/0:32,0:3:5.03:0,5,21	0/1:26,0:26:21.22:21,0,90	0/1:26,0:26:2.58:3,0,20	0/0:20,0:16:24.33:0,24,196	1/1:2,27:29:78.29:735,78,0	0/0:28,0:28:12.01:0,12,234	0/0:27,0:27:39.06:0,39,410	0/0:21,0:21:4.67:0,5,103	0/1:30,0:30:10.92:11,0,139	0/0:27,0:27:2.08:0,2,58	0/0:20,0:20:18.40:0,18,191	0/1:37,0:37:44.11:44,0,359	0/1:30,0:30:22.15:22,0,63	0/0:21,0:21:4.99:0,5,133	0/0:13,0:13:27.69:0,28,198	0/1:6,13:17:1.54:433,0,2	1/1:5,27:32:33.86:618,34,0	1/1:6,17:24:9.42:420,9,0	0/0:38,0:37:0.56:0,1,208	0/1:18,0:18:9.38:9,0,17	0/1:24,0:24:2.33:2,0,124	0/0:29,0:27:8.34:0,8,250	0/0:31,0:31:49.78:0,50,541	0/1:31,0:31:24.87:25,0,140	0/0:26,0:24:57.93:0,58,468
chr10	12803420	.	CGTGTGT	C	689.66	PASS	AB=0.833;AC=17;AF=0.386;AN=44;BaseQRankSum=1.549;DP=619;FS=2.991;HRun=0;HaplotypeScore=147.4113;InbreedingCoeff=0.5368;MQ=53.67;MQ0=22;MQRankSum=-3.403;QD=2.90;ReadPosRankSum=0.195;VQSLOD=2.5664;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:23:3:0,3,25	./.	./.	./.	0/1:12,3:15:0.01:0,0,0	0/0:31,0:28:24.06:0,24,295	0/0:31,0:31:14.13:0,14,192	./.	0/0:12,0:14:2.60:0,3,10	1/1:42,0:42:3.84:14,4,0	0/0:9,0:10:2.92:0,3,17	1/1:29,2:31:5.05:50,5,0	1/1:11,0:15:9.50:139,10,0	1/1:27,10:36:5.96:116,6,0	0/0:20,0:23:2.93:0,3,38	0/0:15,5:20:2.89:0,3,20	1/1:29,1:29:12.04:211,12,0	0/0:11,0:9:0:0,0,0	0/0:21,0:19:3.01:0,3,57	0/0:19,0:19:6.01:0,6,99	0/0:42,0:38:7.54:0,8,89	./.	./.	1/1:28,3:29:6.02:121,6,0	0/0:16,0:16:27.03:0,27,618	1/1:22,1:23:3.01:60,3,0	1/1:9,3:11:5.78:120,6,0	0/0:8,0:6:1.55:0,2,4
chr10	12803486	.	AGT	A	623	PASS	AB=0.717;AC=7;AF=0.125;AN=56;BaseQRankSum=5.678;DP=696;FS=0.000;HRun=0;HaplotypeScore=114.3282;InbreedingCoeff=0.7797;MQ=48.23;MQ0=41;MQRankSum=-2.377;QD=8.42;ReadPosRankSum=-0.476;VQSLOD=3.2153;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:30:66.23:0,66,1094	0/0:4,0:4:6.49:0,6,102	0/0:35,0:4:6.88:0,7,74	0/0:60,0:9:16.29:0,16,232	0/0:18,0:17:30.10:0,30,502	0/0:19,0:17:38.46:0,38,497	0/0:38,0:33:69.19:0,69,1089	1/1:4,9:10:12.49:253,12,0	0/0:27,0:25:66.10:0,66,1024	0/0:22,0:22:60.18:0,60,901	0/0:12,0:12:24.07:0,24,376	0/0:32,0:31:58.19:0,58,936	0/0:27,0:27:68.95:0,69,1052	0/0:29,0:28:44.10:0,44,737	0/0:29,0:26:62.79:0,63,1035	0/0:20,0:19:28.16:0,28,385	0/0:29,0:28:66.13:0,66,983	0/0:13,0:12:24.80:0,25,353	1/1:3,1:2:5.85:52,6,0	1/1:4,10:13:10.58:118,11,0	0/1:26,17:35:1.76:334,0,2	0/0:21,0:21:36.09:0,36,567	0/0:23,0:21:33.04:0,33,495	0/0:52,0:49:99:0,99,1634	0/0:33,0:32:74.45:0,74,1164	0/0:22,0:22:57.18:0,57,894	0/0:22,0:20:39.05:0,39,576	0/0:4,0:4:8.91:0,9,145
chr10	12809583	.	AGAG	A	104.18	PASS	AB=0.889;AC=5;AF=0.132;AN=38;BaseQRankSum=1.372;DP=153;FS=1.750;HRun=0;HaplotypeScore=35.8606;InbreedingCoeff=0.0147;MQ=59.35;MQ0=16;MQRankSum=-1.952;QD=6.13;ReadPosRankSum=1.151;VQSLOD=1.3545;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:10,1:10:24.14:0,24,421	./.	0/0:36,0:3:2.46:0,2,9	0/0:35,0:10:8.28:0,8,242	0/0:4,0:3:3.01:0,3,55	./.	0/0:3,0:3:9.03:0,9,167	0/0:3,0:2:6.02:0,6,128	0/0:3,0:2:6.02:0,6,109	0/0:1,0:1:3.01:0,3,64	./.	0/0:6,0:5:12.04:0,12,256	0/0:5,0:5:14.98:0,15,273	./.	0/0:3,0:3:9.03:0,9,192	0/1:5,0:5:2.54:3,0,202	0/1:3,3:6:99:140,0,108	1/1:0,1:1:3.01:42,3,0	0/0:7,0:1:3.01:0,3,64	0/0:2,0:1:3.01:0,3,64	0/0:13,0:13:27.09:0,27,572	./.	./.	0/1:5,0:5:14.46:14,0,142	./.	./.	0/0:1,0:1:3.01:0,3,45	./.
chr10	12809724	.	A	AGAG	362.64	PASS	AB=0.867;AC=9;AF=0.196;AN=46;BaseQRankSum=1.081;DP=271;FS=3.858;HRun=0;HaplotypeScore=25.2366;InbreedingCoeff=-0.1319;MQ=38.33;MQ0=71;MQRankSum=-2.573;QD=3.94;ReadPosRankSum=2.909;VQSLOD=0.8485;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:12:30.08:0,30,423	./.	./.	0/0:30,0:2:0.87:0,1,35	0/0:4,0:3:3.01:0,3,46	0/0:5,0:3:6.02:0,6,83	0/0:7,0:5:12.03:0,12,184	0/0:3,0:2:5.81:0,6,57	0/0:12,0:11:7.11:0,7,200	0/0:4,0:3:6.02:0,6,92	0/0:5,0:5:9.03:0,9,138	0/1:7,5:10:45.68:46,0,203	0/0:10,0:8:21.07:0,21,319	0/0:3,0:2:3.01:0,3,46	0/1:11,0:10:22.05:22,0,196	0/1:14,0:13:59.07:59,0,258	0/1:14,4:16:88.50:88,0,448	0/1:10,1:10:36.88:37,0,288	./.	./.	1/1:4,6:7:6.02:128,6,0	0/0:8,0:5:12.04:0,12,184	0/1:10,1:8:51.88:52,0,107	0/0:15,4:15:33.11:0,33,505	0/0:7,0:6:12.04:0,12,182	./.	0/1:3,2:5:39.73:58,0,40	0/0:5,0:3:6.01:0,6,71
chr10	12809859	.	AGAGGAGGAGCAG	A	1162.53	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=5.213;DP=332;FS=1.344;HRun=0;HaplotypeScore=70.8625;InbreedingCoeff=0.4949;MQ=40.66;MQ0=65;MQRankSum=-5.510;QD=24.73;ReadPosRankSum=0.965;VQSLOD=2.2773;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:4:9.03:0,9,435	0/0:4,0:4:12.04:0,12,412	0/0:37,0:1:3.01:0,3,32	0/0:35,0:2:2.69:0,3,33	0/0:12,0:11:21.07:0,21,958	1/1:2,13:13:27.09:934,27,0	1/1:4,13:15:9.03:304,9,0	0/0:9,0:4:9.03:0,9,362	0/0:10,0:10:27.09:0,27,1376	0/0:4,0:4:12.04:0,12,654	0/0:4,0:3:9.03:0,9,478	0/0:10,0:8:21.07:0,21,1004	0/0:20,0:15:32.92:0,33,1697	0/0:6,0:6:18.06:0,18,964	0/0:18,0:15:39.13:0,39,1766	0/0:11,0:11:18.06:0,18,778	0/0:8,0:8:12.51:0,13,560	0/0:3,0:3:9.03:0,9,475	0/0:10,0:5:9.03:0,9,422	0/0:8,0:5:9.03:0,9,480	0/0:10,0:6:12.04:0,12,530	0/0:8,0:6:6.02:0,6,293	0/0:13,0:12:24.08:0,24,1126	0/1:15,0:14:46.78:47,0,1086	0/0:5,0:4:12.04:0,12,528	0/0:13,0:10:30.10:0,30,1633	0/0:9,0:9:24.08:0,24,1237	0/0:12,0:12:24.08:0,24,1177
chr10	12811072	.	C	CAT	2263.29	PASS	AB=0.565;AC=7;AF=0.125;AN=56;BaseQRankSum=-11.054;DP=330;FS=4.559;HRun=0;HaplotypeScore=37.8639;InbreedingCoeff=0.6051;MQ=76.28;MQ0=2;MQRankSum=1.163;QD=30.18;ReadPosRankSum=-3.848;VQSLOD=3.1023;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:48.15:0,48,605	0/0:3,0:3:9.03:0,9,113	0/0:16,0:6:5.37:0,5,36	0/0:26,0:12:2.60:0,3,16	0/0:8,0:8:18.04:0,18,213	0/0:1,0:20:42.61:0,43,209	0/0:4,0:8:2.84:0,3,14	1/1:11,34:47:45.14:1492,45,0	0/0:7,0:7:18.04:0,18,213	0/0:5,0:5:15.05:0,15,189	0/0:7,0:7:18.04:0,18,213	0/0:10,0:10:24.08:0,24,302	0/0:7,0:7:21.07:0,21,264	0/0:5,0:5:12.04:0,12,151	0/0:9,0:9:15.05:0,15,189	0/0:9,0:9:18.04:0,18,214	0/0:13,0:13:36.11:0,36,449	0/0:24,0:24:63.20:0,63,791	0/1:3,10:12:6.81:412,0,7	1/1:0,3:3:6.02:100,6,0	1/1:2,10:12:24.08:399,24,0	0/0:1,0:1:3.01:0,3,38	0/0:2,0:2:6.02:0,6,75	0/0:4,0:4:6.02:0,6,75	0/0:7,0:7:21.07:0,21,264	0/0:15,0:15:39.12:0,39,492	0/0:15,0:14:42.12:0,42,517	0/0:16,0:16:45.14:0,45,567
chr10	12814626	.	GTTTCACTTCATA	G	2187.32	PASS	AB=0.907;AC=4;AF=0.071;AN=56;BaseQRankSum=6.144;DP=494;FS=7.848;HRun=0;HaplotypeScore=180.5481;InbreedingCoeff=0.3981;MQ=83.43;MQ0=0;MQRankSum=-7.669;QD=43.75;ReadPosRankSum=-1.911;VQSLOD=2.1122;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:54.19:0,54,3172	0/0:14,0:14:42.14:0,42,2602	0/0:17,0:18:42.94:0,43,2360	0/0:15,0:14:42.14:0,42,2148	0/0:21,0:21:63.22:0,63,3674	0/0:24,0:24:72.25:0,72,4391	0/0:4,0:4:12.04:0,12,571	1/1:10,9:19:40.66:1337,41,0	0/0:17,0:17:51.18:0,51,3141	0/0:23,0:23:69.24:0,69,3996	0/0:21,0:21:63.22:0,63,3770	0/0:17,0:17:51.18:0,51,2912	0/0:18,0:18:54.19:0,54,3185	0/0:16,0:16:48.16:0,48,2668	0/0:13,0:13:39.13:0,39,2371	0/0:19,0:19:57.20:0,57,3371	0/0:35,0:35:99:0,105,6207	0/0:20,0:20:60.21:0,60,3724	0/1:9,0:9:31.29:31,0,336	0/1:17,5:22:99:934,0,691	0/0:2,0:2:1.36:0,1,87	0/0:16,0:16:48.16:0,48,2769	0/0:16,0:16:45.15:0,45,2612	0/0:11,0:11:33.10:0,33,1897	0/0:14,0:14:42.14:0,42,2547	0/0:26,0:26:78.27:0,78,4583	0/0:30,0:29:90.31:0,90,5513	0/0:14,0:14:42.10:0,42,2009
chr10	12814627	.	T	TAAAAACC	3824.27	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=9.595;DP=487;FS=6.947;HRun=0;HaplotypeScore=121.9463;InbreedingCoeff=0.9404;MQ=85.54;MQ0=0;MQRankSum=-9.998;QD=91.05;ReadPosRankSum=-0.620;VQSLOD=4.5260;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:54.19:0,54,1491	0/0:14,0:14:42.14:0,42,1161	0/0:19,0:19:41.68:0,42,1086	0/0:15,0:15:42.11:0,42,977	0/0:21,0:21:63.22:0,63,1741	0/0:24,0:24:72.25:0,72,1990	0/0:4,0:4:12.04:0,12,321	1/1:9,5:15:45.14:1082,45,0	0/0:18,0:18:51.18:0,51,1396	0/0:23,0:23:69.24:0,69,1864	0/0:21,0:21:63.22:0,63,1740	0/0:17,0:17:51.18:0,51,1387	0/0:19,0:19:54.19:0,54,1492	0/0:17,0:17:48.16:0,48,1315	0/0:13,0:13:39.13:0,39,1004	0/0:19,0:19:57.20:0,57,1562	0/0:35,0:35:99:0,105,2862	0/0:21,0:21:60.18:0,60,1585	1/1:2,6:8:24.07:857,24,0	1/1:5,12:18:54.18:1764,54,0	1/1:0,1:1:3.01:122,3,0	0/0:16,0:16:48.14:0,48,1198	0/0:15,0:15:45.15:0,45,1236	0/0:11,0:11:33.10:0,33,816	0/0:15,0:15:42.14:0,42,1126	0/0:26,0:26:78.27:0,78,2127	0/0:30,0:29:90.31:0,90,2465	0/0:14,0:14:42.10:0,42,972
chr10	12814632	.	C	CCA	2324.62	PASS	AB=0.734;AC=6;AF=0.107;AN=56;BaseQRankSum=9.924;DP=522;FS=16.880;HRun=0;HaplotypeScore=89.7317;InbreedingCoeff=0.6979;MQ=86.13;MQ0=0;MQRankSum=-9.865;QD=33.21;ReadPosRankSum=-2.761;VQSLOD=3.5571;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:60.15:0,60,890	0/0:15,0:15:45.15:0,45,729	0/0:22,0:22:49.45:0,49,818	0/0:16,0:16:44.48:0,44,623	0/0:21,0:21:60.20:0,60,974	0/0:24,0:24:72.25:0,72,1171	0/0:4,0:4:12.04:0,12,194	0/1:23,6:28:42.31:809,0,42	0/0:18,0:18:54.18:0,54,881	0/0:24,0:24:72.25:0,72,1166	0/0:24,0:24:63.22:0,63,1025	0/0:15,0:15:45.15:0,45,734	0/0:19,0:19:57.19:0,57,924	0/0:18,0:18:54.16:0,54,825	0/0:14,0:14:39.13:0,39,636	0/0:20,0:20:60.19:0,60,950	0/0:35,0:35:99:0,102,1664	0/0:21,0:21:63.22:0,63,1028	1/1:9,6:15:41.14:653,41,0	0/1:10,13:23:0.73:863,0,1	1/1:2,1:3:9.03:131,9,0	0/0:15,0:15:45.15:0,45,734	0/0:14,0:14:39.13:0,39,636	0/0:10,0:10:30.10:0,30,489	0/0:16,0:16:48.16:0,48,776	0/0:26,0:26:75.25:0,75,1199	0/0:30,0:29:90.31:0,90,1468	0/0:10,0:10:30.10:0,30,490
chr10	12815378	.	C	CGT	1253.65	PASS	AB=0.895;AC=32;AF=0.615;AN=52;BaseQRankSum=-2.389;DP=560;FS=5.432;HRun=0;HaplotypeScore=87.6212;InbreedingCoeff=-0.2098;MQ=65.89;MQ0=22;MQRankSum=0.324;QD=2.74;ReadPosRankSum=0.428;VQSLOD=1.5814;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:24:18.40:36,0,18	0/1:4,1:5:21.38:38,0,21	./.	./.	0/0:5,0:8:2.87:0,3,29	0/0:15,1:16:11.86:0,12,117	0/0:24,0:25:14.75:0,15,147	1/1:26,0:23:1.25:3,1,0	0/1:9,4:13:20.86:38,0,21	1/1:17,0:16:3:27,3,0	0/1:8,3:11:34.96:35,0,40	0/1:20,0:20:0.07:0,0,0	0/1:15,1:16:46.85:93,0,47	0/1:11,0:11:48.70:95,0,49	0/1:15,2:18:32.69:33,0,42	1/1:13,2:16:6.66:198,7,0	0/1:30,2:33:99:139,0,116	0/1:32,3:36:30.61:31,0,66	1/1:17,0:16:3.48:44,3,0	1/1:11,1:18:5.98:48,6,0	1/1:37,0:35:17.97:192,18,0	1/1:11,0:10:3.01:44,3,0	1/1:10,5:17:6.02:88,6,0	0/1:21,9:32:40.95:117,0,41	0/1:11,1:14:17.28:17,0,30	0/1:28,0:27:11.12:11,0,37	0/1:16,0:16:3.73:7,0,4	1/1:14,0:14:6.02:67,6,0
chr10	12816246	.	T	TTGG	680.03	PASS	AB=0.840;AC=25;AF=0.625;AN=40;BaseQRankSum=-3.583;DP=254;FS=2.066;HRun=0;HaplotypeScore=40.1668;InbreedingCoeff=0.2100;MQ=84.71;MQ0=5;MQRankSum=-0.161;QD=5.44;ReadPosRankSum=0.226;VQSLOD=1.6220;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:22:5.95:0,6,42	1/1:1,0:1:3.01:57,3,0	./.	./.	./.	0/0:10,0:10:2.98:0,3,21	0/0:9,0:8:0:0,0,0	./.	1/1:7,0:7:3:25,3,0	1/1:7,0:7:3.01:49,3,0	./.	1/1:7,6:13:6.02:113,6,0	1/1:14,2:16:3.01:57,3,0	0/1:7,3:10:32.61:51,0,33	1/1:6,1:7:3.01:57,3,0	1/1:8,4:12:3.01:57,3,0	1/1:8,0:7:6.02:113,6,0	0/1:4,2:6:12.03:51,0,12	0/1:13,0:12:0:0,0,0	0/0:1,0:1:3:0,3,25	0/0:12,0:12:3:0,3,25	1/1:6,0:6:3.01:57,3,0	./.	1/1:7,2:9:3.01:57,3,0	./.	0/0:3,0:3:3:0,3,28	1/1:10,0:10:3.01:57,3,0	./.
chr10	12816294	.	GTGGTGT	G	862.35	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=-1.949;DP=240;FS=0.000;HRun=0;HaplotypeScore=51.7685;InbreedingCoeff=0.4543;MQ=73.73;MQ0=10;MQRankSum=-0.189;QD=13.69;ReadPosRankSum=-2.442;VQSLOD=1.6307;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:23.97:0,24,201	0/0:4,0:4:12:0,12,165	0/0:17,0:11:32.94:0,33,306	0/0:9,0:8:10.31:0,10,145	0/0:2,0:2:5.90:0,6,40	1/1:0,6:6:3.01:71,3,0	1/1:9,0:8:23.91:217,24,0	1/1:10,0:8:16.97:158,17,0	0/0:9,0:8:23.95:0,24,278	0/0:7,0:7:17.92:0,18,222	0/0:3,0:3:6.80:0,7,85	0/0:12,0:12:23.86:0,24,327	0/0:13,0:13:32.67:0,33,390	0/0:12,0:10:24:0,24,348	0/0:8,0:8:24:0,24,269	0/0:16,0:15:38.86:0,39,384	0/0:13,0:11:32.95:0,33,399	0/0:5,0:5:11.98:0,12,161	0/1:11,0:11:62.48:172,0,62	0/1:6,0:6:56.76:87,0,57	0/1:21,0:21:23.36:306,0,23	0/0:4,0:4:12:0,12,165	0/0:3,0:3:9:0,9,122	0/0:6,0:6:11.98:0,12,162	0/0:7,0:7:20.96:0,21,172	0/0:5,0:5:14.98:0,15,206	0/0:5,0:5:11.96:0,12,158	0/0:5,0:4:11.97:0,12,95
chr10	12816297	.	GTGT	G	872.13	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=-1.322;DP=254;FS=0.000;HRun=0;HaplotypeScore=41.4261;InbreedingCoeff=0.7329;MQ=76.18;MQ0=8;MQRankSum=0.306;QD=13.63;ReadPosRankSum=-1.714;VQSLOD=2.6459;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:3.73:0,4,164	0/0:4,0:4:12:0,12,126	0/0:18,0:12:35.62:0,36,317	0/0:10,0:9:15.64:0,16,171	0/0:3,0:3:8.89:0,9,65	1/1:6,0:6:3.01:32,3,0	1/1:8,0:8:23.58:179,24,0	1/1:10,0:9:21.01:188,21,0	0/0:10,0:9:26.94:0,27,234	0/0:7,0:7:17.92:0,18,185	0/0:3,0:3:6.79:0,7,46	0/0:11,0:11:23.80:0,24,249	0/0:14,0:14:35.67:0,36,345	0/0:14,0:12:29.98:0,30,315	0/0:10,0:10:26.99:0,27,255	0/0:17,0:16:41.85:0,42,369	0/0:13,0:11:29.98:0,30,301	0/0:5,0:5:11.98:0,12,122	1/1:8,4:12:16.48:206,16,0	0/1:6,0:6:17.58:87,0,18	1/1:22,0:22:18.86:348,19,0	0/0:5,0:5:12:0,12,126	0/0:3,0:3:9:0,9,104	0/0:6,0:6:11.98:0,12,123	0/0:8,0:8:20.96:0,21,172	0/0:5,0:5:14.98:0,15,156	0/0:5,0:5:14.96:0,15,146	0/0:5,0:4:11.97:0,12,95
chr10	12820525	.	CTCTATCTATCTA	C	253.95	PASS	AC=2;AF=0.038;AN=52;BaseQRankSum=2.899;DP=672;FS=0.000;HRun=0;HaplotypeScore=234.7521;InbreedingCoeff=0.7271;MQ=63.60;MQ0=9;MQRankSum=-3.310;QD=18.14;ReadPosRankSum=-0.863;VQSLOD=2.4855;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:26:13.21:0,13,561	0/0:10,0:10:17.99:0,18,571	./.	0/0:22,0:15:2.92:0,3,17	0/0:27,0:27:36.11:0,36,1364	1/1:6,8:14:18.06:344,18,0	./.	0/0:51,0:49:34.43:0,34,447	0/0:23,0:23:35.68:0,36,1147	0/0:24,0:23:45.15:0,45,2055	0/0:23,0:23:18.06:0,18,798	0/0:40,0:39:65.69:0,66,1018	0/0:27,0:27:39.12:0,39,1097	0/0:18,0:18:33.11:0,33,1005	0/0:29,0:29:50.98:0,51,1803	0/0:31,0:31:58.05:0,58,2248	0/0:22,0:20:8.98:0,9,777	0/0:23,0:23:42.14:0,42,1821	0/0:18,0:17:12.04:0,12,218	0/0:24,0:24:15.31:0,15,286	0/0:26,0:25:37.01:0,37,1267	0/0:20,0:20:24.48:0,24,671	0/0:24,0:24:11.85:0,12,574	0/0:18,0:17:24.08:0,24,1122	0/0:25,0:25:45.13:0,45,798	0/0:22,0:21:39.13:0,39,1671	0/0:30,0:30:60.11:0,60,1975	0/0:20,0:20:30.08:0,30,1280
chr10	12826804	.	CT	C	2909.82	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=10.143;DP=667;FS=4.715;HRun=1;HaplotypeScore=66.2641;InbreedingCoeff=0.9996;MQ=72.97;MQ0=0;MQRankSum=0.182;QD=34.23;ReadPosRankSum=-3.005;VQSLOD=2.4687;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,132,1964	0/0:13,0:13:39.07:0,39,533	0/0:17,0:15:36.89:0,37,469	0/0:13,0:13:29.15:0,29,426	0/0:28,0:28:81.26:0,81,1242	0/0:24,0:24:72.22:0,72,1081	0/0:27,0:27:81.21:0,81,1157	1/1:0,33:33:87.07:1082,87,0	0/0:24,0:24:72.22:0,72,1079	0/0:22,0:22:66.21:0,66,993	0/0:17,0:17:51.16:0,51,773	0/0:24,0:24:72.22:0,72,1082	0/0:23,0:23:63.21:0,63,985	0/0:20,0:20:60.20:0,60,938	0/0:28,0:28:84.29:0,84,1311	0/0:28,0:28:84.27:0,84,1291	0/0:30,0:30:90.26:0,90,1337	0/0:25,0:25:75.20:0,75,1093	1/1:0,12:12:36.10:467,36,0	1/1:0,16:16:48.12:645,48,0	1/1:0,24:24:63.21:876,63,0	0/0:21,0:21:60.18:0,60,894	0/0:28,0:28:84.26:0,84,1267	0/0:35,0:35:99:0,105,1564	0/0:25,0:25:75.24:0,75,1148	0/0:25,0:25:75.25:0,75,1150	0/0:30,0:30:87.25:0,87,1292	0/0:10,0:10:30.08:0,30,443
chr10	12827583	.	C	CA	27995.42	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-10.278;DP=845;FS=9.171;HRun=1;HaplotypeScore=91.7331;InbreedingCoeff=0.9997;MQ=82.49;MQ0=0;MQRankSum=-7.247;QD=38.51;ReadPosRankSum=3.426;VQSLOD=5.0069;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,114,1448	1/1:0,13:13:30.10:449,30,0	0/0:24,0:24:69.21:0,69,881	0/0:25,0:25:65.92:0,66,764	1/1:2,34:36:99:1407,99,0	1/1:0,33:33:90.30:1348,90,0	1/1:1,23:24:69.23:1034,69,0	1/1:3,41:44:99:1808,126,0	1/1:1,28:29:72.24:1078,72,0	1/1:1,35:36:99:1528,105,0	1/1:0,24:24:69.23:1033,69,0	1/1:1,30:31:64.10:985,64,0	1/1:0,27:27:75.25:1123,75,0	1/1:1,24:25:63.21:936,63,0	1/1:2,32:34:87.29:1304,87,0	1/1:1,43:44:99:1457,99,0	1/1:0,40:40:99:1483,99,0	1/1:1,24:25:63.21:944,63,0	1/1:2,15:17:45.14:654,45,0	1/1:1,23:24:69.19:1008,69,0	1/1:1,43:44:99:1592,108,0	1/1:0,23:23:63.21:944,63,0	1/1:1,22:23:51.17:764,51,0	1/1:1,43:44:99:1566,105,0	0/0:28,0:28:78.24:0,78,1000	1/1:1,33:34:99:1528,102,0	1/1:1,37:35:99:1572,105,0	1/1:0,15:15:30.10:449,30,0
chr10	12827836	.	AT	A	10851.55	PASS	AB=0.900;AC=49;AF=0.875;AN=56;BaseQRankSum=5.987;DP=607;FS=13.938;HRun=10;HaplotypeScore=61.8912;InbreedingCoeff=0.8925;MQ=67.33;MQ0=0;MQRankSum=-2.108;QD=20.32;ReadPosRankSum=2.028;VQSLOD=4.7264;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:84.19:0,84,915	1/1:1,8:9:17.99:156,18,0	0/1:8,1:9:2.06:2,0,190	0/0:9,0:9:14.58:0,15,140	1/1:4,21:25:53.98:469,54,0	1/1:2,15:17:41.99:365,42,0	1/1:5,18:23:38.95:339,39,0	1/1:7,32:39:95.95:829,96,0	1/1:3,13:16:29.99:260,30,0	1/1:1,25:26:71.94:620,72,0	1/1:3,14:17:41.99:364,42,0	1/1:4,27:31:74.97:651,75,0	1/1:3,17:20:44.99:391,45,0	1/1:1,18:19:47.99:417,48,0	1/1:2,26:28:74.98:651,75,0	1/1:1,17:19:50.03:423,50,0	1/1:3,12:15:35.99:313,36,0	1/1:3,19:22:53.98:469,54,0	1/1:5,21:26:59.93:514,60,0	1/1:3,33:36:95.98:833,96,0	1/1:2,23:25:62.95:547,63,0	1/1:5,10:16:26.02:214,26,0	1/1:2,29:32:80:683,80,0	1/1:1,9:10:23.99:208,24,0	0/0:32,0:32:87.23:0,87,954	1/1:2,21:23:62.93:534,63,0	1/1:3,17:20:50.99:443,51,0	1/1:4,7:11:17.99:156,18,0
chr10	12828069	.	TCTTCTC	T	8032.72	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=9.980;DP=436;FS=3.029;HRun=0;HaplotypeScore=99.2991;InbreedingCoeff=0.9374;MQ=47.11;MQ0=10;MQRankSum=-8.507;QD=31.13;ReadPosRankSum=2.751;VQSLOD=4.7780;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:50.86:0,51,1288	1/1:1,3:4:12.04:222,12,0	0/0:33,0:8:18.78:0,19,263	0/0:38,0:11:14.40:0,14,298	1/1:3,4:7:15.01:223,15,0	1/1:4,11:15:24.08:521,24,0	1/1:4,7:11:18.06:325,18,0	0/0:23,0:22:33.08:0,33,706	1/1:3,8:11:24.05:475,24,0	1/1:14,0:14:23.70:348,24,0	1/1:6,8:13:35.95:558,36,0	1/1:7,15:22:29.93:650,30,0	1/1:6,10:16:17.57:346,18,0	1/1:4,9:13:14.80:280,15,0	1/1:4,14:18:39.09:766,39,0	1/1:5,8:13:19.05:363,19,0	1/1:4,9:13:6.02:125,6,0	1/1:1,7:8:12:214,12,0	0/0:16,0:16:39.06:0,39,790	0/0:6,0:6:12.04:0,12,281	0/0:26,0:26:57.06:0,57,1522	1/1:6,7:9:15.02:280,15,0	1/1:2,4:6:15.05:303,15,0	1/1:3,8:10:8.99:137,9,0	0/0:13,0:13:36.11:0,36,1021	1/1:4,7:11:21.07:456,21,0	1/1:4,13:17:32.82:670,33,0	1/1:1,20:21:36.12:773,36,0
chr10	12828100	.	TTCCTCC	T	5243.89	PASS	AB=1.000;AC=41;AF=0.732;AN=56;BaseQRankSum=7.037;DP=468;FS=58.909;HRun=0;HaplotypeScore=112.5726;InbreedingCoeff=0.8093;MQ=38.14;MQ0=34;MQRankSum=-5.335;QD=20.48;ReadPosRankSum=3.073;VQSLOD=2.2265;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:13:21.02:0,21,524	1/1:4,0:4:6.02:112,6,0	0/0:57,0:11:12.03:0,12,205	0/0:61,0:15:20.73:0,21,413	1/1:9,0:7:8.67:158,9,0	1/1:15,0:12:21.07:412,21,0	1/1:8,2:10:12.04:251,12,0	0/0:25,0:18:16.51:0,17,320	1/1:9,0:9:6.02:111,6,0	1/1:13,1:10:21.07:361,21,0	1/1:13,0:13:20.96:376,21,0	1/1:18,0:17:18.06:337,18,0	1/1:13,0:13:17.60:312,18,0	1/1:11,0:11:11.73:204,12,0	1/1:15,1:15:21.07:373,21,0	1/1:9,0:9:12.04:212,12,0	1/1:20,0:17:18.02:312,18,0	1/1:11,0:11:12.04:196,12,0	0/0:16,0:15:26.94:0,27,456	0/1:6,0:4:8.51:9,0,36	0/0:25,0:23:14.18:0,14,363	1/1:16,0:11:12.04:183,12,0	1/1:10,0:8:12.04:238,12,0	1/1:12,0:9:8.55:162,9,0	0/0:12,0:10:21.07:0,21,506	1/1:10,0:10:12.04:214,12,0	1/1:17,0:17:24.08:449,24,0	1/1:13,0:13:15.05:264,15,0
chr10	12828119	.	TCCTCC	T	6622.09	PASS	AB=0.974;AC=42;AF=0.750;AN=56;BaseQRankSum=3.006;DP=456;FS=57.032;HRun=0;HaplotypeScore=73.3990;InbreedingCoeff=0.7373;MQ=32.94;MQ0=58;MQRankSum=-5.630;QD=22.76;ReadPosRankSum=1.382;VQSLOD=2.5037;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:11:20.30:0,20,522	1/1:2,2:4:8.86:145,9,0	0/0:48,0:5:14.78:0,15,225	0/0:50,0:9:20.73:0,21,418	1/1:8,3:10:12.76:208,13,0	1/1:11,6:10:21.54:450,22,0	1/1:5,1:6:12.04:236,12,0	0/1:37,0:28:10.77:11,0,299	1/1:5,2:7:9.90:154,10,0	1/1:14,6:15:23.95:491,24,0	1/1:7,6:13:26.99:431,27,0	1/1:5,6:8:18.06:393,18,0	1/1:3,6:8:22.25:426,22,0	1/1:5,4:8:12.51:261,13,0	1/1:6,6:11:24.01:487,24,0	1/1:9,4:12:23.60:323,24,0	1/1:8,8:14:17.03:417,17,0	1/1:5,2:8:15.35:262,15,0	0/0:14,0:12:26.03:0,26,502	0/1:17,0:14:16.01:26,0,16	0/0:24,0:18:10.04:0,10,350	1/1:14,3:11:10.40:251,10,0	1/1:2,4:4:12.04:256,12,0	1/1:12,4:12:7.20:196,7,0	0/0:15,0:13:22.68:0,23,495	1/1:7,4:10:19.24:307,19,0	1/1:8,8:15:30.56:552,31,0	1/1:3,5:6:15.05:339,15,0
chr10	12830933	.	T	TA	12341.89	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-0.978;DP=597;FS=2.143;HRun=6;HaplotypeScore=213.2535;InbreedingCoeff=0.8751;MQ=60.01;MQ0=0;MQRankSum=-4.531;QD=21.58;ReadPosRankSum=3.622;VQSLOD=2.3198;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,24:26:75.18:911,75,0	1/1:9,0:9:20.90:164,21,0	0/0:15,0:14:3.65:0,4,193	0/0:10,0:8:10.34:0,10,70	1/1:27,4:31:77.61:701,78,0	1/1:17,3:20:56.54:477,57,0	1/1:13,2:15:38.28:273,38,0	1/1:18,6:25:59.27:509,59,0	1/1:20,2:22:62.35:461,62,0	1/1:22,2:24:68.44:539,68,0	1/1:23,1:24:56.59:457,57,0	1/1:9,4:13:35.90:330,36,0	1/1:26,3:29:67.86:558,68,0	1/1:17,1:18:50.05:392,50,0	1/1:22,3:25:65.38:525,65,0	1/1:25,1:26:68.51:562,69,0	1/1:23,4:26:65.64:557,66,0	1/1:5,1:6:14.91:126,15,0	1/1:13,1:13:32.71:254,33,0	1/1:24,4:28:77.34:601,77,0	1/1:21,1:22:32.70:276,33,0	1/1:28,3:30:74.64:638,75,0	1/1:14,1:15:41.66:319,42,0	1/1:21,2:23:43.84:391,44,0	1/1:5,24:29:63.20:785,63,0	1/1:25,1:26:71.46:546,71,0	1/1:28,2:30:83.29:657,83,0	1/1:14,0:14:41.81:333,42,0
chr10	12830939	.	ATT	A	14031.48	PASS	AB=0.941;AC=49;AF=0.875;AN=56;BaseQRankSum=6.894;DP=554;FS=8.622;HRun=2;HaplotypeScore=208.6757;InbreedingCoeff=0.8107;MQ=60.25;MQ0=0;MQRankSum=-7.835;QD=28.52;ReadPosRankSum=2.342;VQSLOD=4.0557;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:58.21:0,58,751	1/1:0,7:7:21.06:257,21,0	0/1:15,0:15:16.44:16,0,534	0/0:10,0:8:13.16:0,13,104	1/1:8,22:30:44.99:656,45,0	1/1:3,17:20:39.13:573,39,0	1/1:3,10:14:32.55:368,33,0	1/1:7,13:20:15.19:466,15,0	1/1:2,19:21:62.94:689,63,0	1/1:3,21:24:68.60:772,69,0	1/1:7,16:23:62.02:612,62,0	1/1:4,8:12:35.88:407,36,0	1/1:5,20:26:58.90:739,59,0	1/1:2,15:17:51.13:605,51,0	1/1:4,20:24:71.24:729,71,0	1/1:3,20:23:69.02:791,69,0	1/1:6,18:23:65.46:702,65,0	1/1:1,4:5:14.95:155,15,0	1/1:1,10:10:30.09:350,30,0	1/1:6,21:27:66.39:783,66,0	1/1:4,13:17:38.45:333,38,0	1/1:4,23:26:74.46:842,74,0	1/1:2,12:14:30.59:414,31,0	1/1:4,18:22:51.25:564,51,0	0/0:26,0:26:11.79:0,12,527	1/1:2,22:24:60.75:791,61,0	1/1:5,25:30:78.88:912,79,0	1/1:0,14:14:42.06:506,42,0
chr10	12830940	.	TTATGA	T	18313.62	PASS	AB=1.000;AC=49;AF=0.875;AN=56;BaseQRankSum=6.302;DP=539;FS=7.964;HRun=0;HaplotypeScore=217.6677;InbreedingCoeff=0.8826;MQ=60.31;MQ0=0;MQRankSum=-7.129;QD=38.80;ReadPosRankSum=1.373;VQSLOD=3.8629;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:75.24:0,75,2063	1/1:7,0:7:21.07:335,21,0	0/0:16,0:16:15.08:0,15,1003	0/1:9,0:7:2.74:3,0,80	1/1:28,0:28:57.17:828,57,0	1/1:20,0:20:51.15:776,51,0	1/1:14,0:14:39.11:552,39,0	1/1:19,0:19:45.13:627,45,0	1/1:21,0:21:57.19:867,57,0	1/1:23,0:23:66.22:1032,66,0	1/1:19,2:21:51.17:820,51,0	1/1:12,0:12:33.10:510,33,0	1/1:25,1:26:66.16:994,66,0	1/1:16,1:17:51.17:823,51,0	1/1:24,0:24:60.20:982,60,0	1/1:23,0:23:63.20:1004,63,0	1/1:24,0:23:57.18:871,57,0	1/1:5,0:5:12.04:183,12,0	1/1:11,0:10:30.10:462,30,0	1/1:25,0:25:63.21:967,63,0	1/1:16,0:16:30.10:492,30,0	1/1:27,0:26:66.22:1065,66,0	1/1:13,0:13:33.11:505,33,0	1/1:20,2:22:45.11:734,45,0	0/0:25,0:25:57.19:0,57,1598	1/1:23,0:23:66.22:1024,66,0	1/1:27,1:28:78.26:1227,78,0	1/1:14,0:14:39.13:633,39,0
chr10	12830942	.	ATG	A	6006.35	PASS	AB=0.974;AC=43;AF=0.768;AN=56;BaseQRankSum=12.608;DP=530;FS=2.550;HRun=0;HaplotypeScore=230.1042;InbreedingCoeff=0.4896;MQ=58.44;MQ0=0;MQRankSum=-7.769;QD=13.20;ReadPosRankSum=6.449;VQSLOD=4.4960;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:78.25:0,78,1530	1/1:7,0:7:20.40:117,20,0	0/0:16,0:16:23.95:0,24,659	0/0:7,0:5:5.51:0,6,70	0/1:27,0:27:17.54:238,0,18	0/1:18,2:20:18.08:242,0,18	0/1:15,0:15:0.82:149,0,1	0/1:19,0:19:84.27:156,0,84	1/1:20,0:20:55.57:323,56,0	1/1:23,0:23:60.41:360,60,0	1/1:21,0:21:49.42:280,49,0	1/1:12,0:12:22.53:157,23,0	0/1:25,1:26:3.91:305,0,4	1/1:17,0:17:49.43:277,49,0	1/1:23,0:23:58.05:333,58,0	1/1:21,0:21:52:339,52,0	1/1:23,0:22:46.05:302,46,0	1/1:5,0:5:11.28:62,11,0	1/1:11,0:10:29.15:168,29,0	1/1:25,0:25:30.53:320,31,0	1/1:14,0:14:28.78:156,29,0	1/1:26,0:25:41.95:354,42,0	1/1:13,0:13:1.38:156,1,0	1/1:22,0:22:36.67:234,37,0	0/0:25,0:25:60.10:0,60,1162	1/1:23,0:23:31.80:346,32,0	1/1:27,1:28:53.72:413,54,0	1/1:14,0:14:37.95:221,38,0
chr10	12830943	.	TGA	T	13274.31	PASS	AB=1.000;AC=49;AF=0.875;AN=56;BaseQRankSum=9.783;DP=524;FS=7.775;HRun=0;HaplotypeScore=203.5148;InbreedingCoeff=0.8708;MQ=58.46;MQ0=0;MQRankSum=-6.519;QD=28.61;ReadPosRankSum=4.144;VQSLOD=5.2445;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:81.26:0,81,1550	1/1:0,7:7:21.06:257,21,0	0/1:16,0:16:0.39:0,0,672	0/0:6,0:5:6.02:0,6,92	1/1:5,21:26:40.46:593,40,0	1/1:5,15:20:34.14:535,34,0	1/1:4,11:15:30.57:369,31,0	1/1:8,12:20:14.90:459,15,0	1/1:1,19:20:57.16:656,57,0	1/1:1,21:22:66.11:759,66,0	1/1:3,16:19:51.11:577,51,0	1/1:4,8:12:32.93:389,33,0	1/1:7,19:26:48.32:687,48,0	1/1:2,15:17:51.13:604,51,0	1/1:3,20:23:60.13:684,60,0	1/1:1,20:21:63.01:736,63,0	1/1:3,18:20:56.96:659,57,0	1/1:1,4:5:12.03:138,12,0	1/1:1,10:10:30.09:350,30,0	1/1:3,21:24:54.87:704,55,0	1/1:1,13:14:30.04:306,30,0	1/1:3,23:25:66.19:796,66,0	1/1:1,12:13:24.74:371,25,0	1/1:3,18:21:45.07:538,45,0	0/0:25,0:25:56.30:0,56,1129	1/1:1,22:23:57.74:764,58,0	1/1:4,24:28:70.94:856,71,0	1/1:0,14:14:39.12:488,39,0
chr10	12830981	.	T	TACAC	809.87	PASS	AB=0.944;AC=5;AF=0.100;AN=50;BaseQRankSum=-6.779;DP=686;FS=6.835;HRun=0;HaplotypeScore=299.1335;InbreedingCoeff=0.5450;MQ=42.60;MQ0=25;MQRankSum=6.081;QD=8.90;ReadPosRankSum=-0.669;VQSLOD=1.7514;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:28,4:33:0.59:703,0,1	0/0:16,0:16:12.01:0,12,111	./.	./.	0/1:20,0:18:0:0,0,1	0/0:22,0:21:12.34:0,12,112	0/0:27,0:27:9.92:0,10,71	./.	0/0:33,0:30:18.49:0,18,168	0/0:21,0:21:20.97:0,21,192	0/0:23,0:21:8.91:0,9,93	0/0:14,0:14:12.01:0,12,111	0/0:29,0:29:29.90:0,30,278	0/0:24,0:24:15.02:0,15,139	0/0:34,0:34:30.37:0,30,279	0/0:23,0:23:26.95:0,27,240	0/0:26,0:25:11.85:0,12,128	0/0:19,0:18:15.02:0,15,164	0/0:22,0:18:12.01:0,12,112	0/0:30,0:29:36.04:0,36,335	0/0:37,0:34:0.47:0,0,1	0/0:26,0:26:2.80:0,3,13	0/1:24,0:22:0.22:0,0,0	0/0:26,0:26:6.01:0,6,56	1/1:12,0:12:9.03:201,9,0	0/0:27,0:27:14.94:0,15,138	0/0:31,0:28:39.01:0,39,354	0/0:14,0:14:9.01:0,9,84
chr10	12831003	.	CACACACACACACACACACAG	C	3808.95	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=-4.027;DP=714;FS=1.137;HRun=0;HaplotypeScore=356.2570;InbreedingCoeff=0.5684;MQ=43.76;MQ0=30;MQRankSum=0.196;QD=20.26;ReadPosRankSum=-4.965;VQSLOD=0.7346;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:38:87.24:0,87,6224	0/0:11,0:11:15.05:0,15,651	0/0:28,0:9:26.68:0,27,903	0/0:38,0:10:30.10:0,30,704	0/0:28,0:25:8.36:0,8,315	0/0:25,0:23:27.08:0,27,825	0/0:29,0:29:3.72:0,4,795	1/1:24,0:20:41.85:403,42,0	0/0:32,0:29:22.09:0,22,880	0/1:26,0:26:40.56:41,0,3163	0/0:19,0:17:23.38:0,23,1323	0/0:15,0:15:21.07:0,21,825	0/0:26,0:26:38.36:0,38,2066	0/0:18,0:18:4.11:0,4,812	0/0:35,0:35:40.03:0,40,1557	0/0:26,0:26:35.37:0,35,1352	0/0:29,0:28:22.43:0,22,801	0/1:24,0:22:6.81:7,0,1107	1/1:6,17:21:50.54:941,51,0	1/1:5,23:28:42.14:2240,42,0	1/1:15,27:39:6.49:168,6,0	0/1:20,0:20:9.11:9,0,231	0/0:28,0:26:4.63:0,5,384	0/0:23,0:23:17.59:0,18,779	0/0:14,0:14:30.09:0,30,1805	0/0:26,0:26:54.34:0,54,3185	0/0:29,0:26:45.15:0,45,1740	0/0:7,0:7:15.05:0,15,690
chr10	12831013	.	CACACACACAG	C	3431.01	PASS	AB=0.983;AC=28;AF=0.500;AN=56;BaseQRankSum=7.320;DP=670;FS=1.056;HRun=0;HaplotypeScore=257.3792;InbreedingCoeff=0.1581;MQ=50.82;MQ0=23;MQRankSum=-6.251;QD=7.28;ReadPosRankSum=4.523;VQSLOD=2.3463;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:43:99:0,99,3038	0/1:11,0:11:11.65:50,0,12	0/0:28,0:11:19:0,19,273	0/0:27,0:10:20.22:0,20,234	0/1:22,0:20:8.03:8,0,40	1/1:27,0:25:13.71:199,14,0	0/1:29,2:31:99:146,0,127	1/1:15,0:13:38.83:304,39,0	0/1:31,1:29:47.93:146,0,48	0/1:24,0:24:99:123,0,948	0/0:17,0:15:15.26:0,15,381	0/0:14,0:14:4.04:0,4,56	0/1:26,0:26:52.53:53,0,69	0/1:19,1:20:5.74:114,0,6	1/1:32,1:33:6.64:50,7,0	1/1:25,0:25:13.25:110,13,0	0/1:28,1:28:41.20:122,0,41	0/1:24,0:23:22.94:23,0,138	1/1:19,0:17:50.54:598,51,0	1/1:25,0:24:41.81:987,42,0	1/1:31,0:28:0.94:2,1,0	1/1:20,0:20:3.41:19,3,0	0/0:25,0:25:3.58:0,4,84	0/0:21,0:21:1.78:0,2,21	0/0:16,0:16:38.97:0,39,832	0/1:28,0:28:99:179,0,483	1/1:29,0:27:20.51:197,21,0	0/0:6,0:6:4.67:0,5,96
chr10	12831015	.	CACACACAG	C	5656.62	PASS	AB=0.946;AC=38;AF=0.679;AN=56;BaseQRankSum=5.705;DP=652;FS=0.000;HRun=0;HaplotypeScore=226.4025;InbreedingCoeff=0.2741;MQ=55.18;MQ0=20;MQRankSum=-6.233;QD=11.11;ReadPosRankSum=5.388;VQSLOD=3.4583;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:44:99:0,102,2448	1/1:10,1:11:14.39:183,14,0	0/0:29,0:13:24.97:0,25,289	0/0:27,0:11:26.14:0,26,276	0/1:20,0:18:7.83:8,0,17	1/1:4,20:23:14.15:427,14,0	0/1:9,16:25:82.19:261,0,82	1/1:17,0:15:41.83:330,42,0	1/1:29,2:29:6.49:223,6,0	0/1:23,0:23:99:145,0,618	0/1:17,0:15:8.53:9,0,238	1/1:15,0:15:0.14:70,0,0	1/1:23,3:26:2.30:333,2,0	1/1:18,0:19:20.66:207,21,0	1/1:30,2:32:29.28:331,29,0	1/1:23,2:25:29.94:391,30,0	1/1:26,2:27:6.04:202,6,0	0/1:24,0:23:17.71:124,0,18	1/1:19,0:17:50.54:543,51,0	1/1:24,0:24:39.88:796,40,0	0/1:31,0:28:0:0,0,0	1/1:20,0:20:5.94:45,6,0	0/0:25,0:25:0.93:0,1,22	1/1:20,0:20:5.92:54,6,0	0/0:16,0:16:38.77:0,39,692	0/1:24,1:25:99:349,0,102	1/1:24,3:26:42.02:582,42,0	0/1:6,0:6:21.11:43,0,21
chr10	12831017	.	CACACAG	C	7855.26	PASS	AB=0.989;AC=44;AF=0.786;AN=56;BaseQRankSum=4.243;DP=628;FS=8.437;HRun=0;HaplotypeScore=192.5663;InbreedingCoeff=0.5490;MQ=56.10;MQ0=20;MQRankSum=-6.315;QD=15.34;ReadPosRankSum=5.673;VQSLOD=2.9928;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:41:96.09:0,96,1850	1/1:3,8:11:17.92:305,18,0	0/0:30,0:14:27.87:0,28,301	0/0:27,0:11:26.14:0,26,276	1/1:6,13:17:3.67:14,4,0	1/1:21,0:20:15.05:262,15,0	0/1:20,1:21:52.39:180,0,52	1/1:17,0:15:41.83:330,42,0	1/1:12,19:29:17.89:352,18,0	0/1:23,0:23:99:176,0,303	0/1:17,0:15:50.86:51,0,115	1/1:5,10:15:11.91:232,12,0	1/1:9,16:25:21.71:719,22,0	1/1:1,14:16:20.95:380,21,0	1/1:6,23:29:29.28:705,29,0	1/1:2,22:24:30.03:632,30,0	1/1:5,22:26:17.86:235,18,0	1/1:5,18:22:16.69:328,17,0	1/1:19,0:17:50.54:487,51,0	1/1:24,0:24:37.68:616,38,0	0/1:31,0:28:0:0,0,0	1/1:3,16:19:5.95:90,6,0	1/1:4,19:23:0.94:3,1,0	1/1:2,17:19:5.22:144,5,0	0/0:16,0:16:39:0,39,564	1/1:10,13:23:37.19:538,37,0	1/1:6,23:28:42.08:917,42,0	1/1:2,4:6:8.86:160,9,0
chr10	12831019	.	CACAG	C	5543.07	PASS	AB=0.983;AC=44;AF=0.786;AN=56;BaseQRankSum=6.074;DP=587;FS=3.942;HRun=0;HaplotypeScore=161.7844;InbreedingCoeff=0.5552;MQ=58.42;MQ0=18;MQRankSum=-6.688;QD=11.82;ReadPosRankSum=5.444;VQSLOD=4.3509;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:41:93.08:0,93,1312	1/1:9,0:9:17.92:192,18,0	0/0:30,0:14:27.82:0,28,277	0/0:28,0:12:29.10:0,29,295	1/1:15,0:13:3.69:13,4,0	1/1:21,0:20:15.05:192,15,0	0/1:21,0:21:23.12:138,0,23	1/1:18,0:16:44.81:350,45,0	1/1:25,1:24:18.06:257,18,0	0/1:23,0:23:40.42:285,0,40	0/1:13,1:14:15.05:58,0,15	1/1:11,1:12:12.04:178,12,0	1/1:22,0:22:39.01:427,39,0	1/1:16,0:16:20.96:234,21,0	1/1:26,0:26:30.01:393,30,0	1/1:24,0:24:30.03:374,30,0	1/1:25,1:25:17.87:194,18,0	1/1:21,0:20:17.25:196,17,0	1/1:19,0:17:50.54:431,51,0	1/1:24,0:24:36.11:444,36,0	0/1:31,0:28:0:0,0,0	1/1:16,0:16:5.86:57,6,0	1/1:20,0:20:0.94:3,1,0	1/1:18,0:18:5.77:78,6,0	0/0:17,0:17:38.99:0,39,444	1/1:16,0:16:35.94:372,36,0	1/1:26,0:26:42.07:537,42,0	1/1:5,0:5:9.03:138,9,0
chr10	12831021	.	CAG	C	4336.73	PASS	AB=1.000;AC=47;AF=0.839;AN=56;BaseQRankSum=6.684;DP=584;FS=8.147;HRun=0;HaplotypeScore=153.5541;InbreedingCoeff=0.8018;MQ=58.76;MQ0=18;MQRankSum=-7.211;QD=9.31;ReadPosRankSum=4.989;VQSLOD=3.8234;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:86.82:0,87,822	1/1:9,0:9:17.86:136,18,0	0/0:30,0:14:27.73:0,28,273	0/0:29,0:13:32.11:0,32,328	1/1:15,0:13:3.20:13,3,0	1/1:21,0:20:14.97:123,15,0	1/1:21,0:21:13.39:112,13,0	1/1:12,7:17:47.81:376,48,0	1/1:26,0:24:17.91:153,18,0	1/1:7,15:22:44.95:427,45,0	1/1:11,0:11:18.01:196,18,0	1/1:12,0:12:11.99:103,12,0	1/1:22,0:22:38:288,38,0	1/1:16,0:16:20.89:164,21,0	1/1:26,0:26:29.81:253,30,0	1/1:24,0:24:29.88:246,30,0	1/1:26,0:25:17.82:131,18,0	1/1:21,0:20:17.92:142,18,0	1/1:19,0:17:50.47:375,50,0	1/1:24,0:24:35.84:277,36,0	0/1:31,0:28:0:0,0,0	1/1:16,0:16:5.50:43,5,0	1/1:20,0:20:0.45:1,0,0	1/1:18,0:18:5.99:51,6,0	0/0:16,0:16:38.99:0,39,366	1/1:16,0:16:35.92:299,36,0	1/1:26,0:26:41.91:349,42,0	1/1:4,1:5:9:78,9,0
chr10	12831225	.	CGTGTGT	C	9016.82	PASS	AB=0.714;AC=39;AF=0.696;AN=56;BaseQRankSum=4.901;DP=787;FS=18.152;HRun=0;HaplotypeScore=179.2220;InbreedingCoeff=0.8995;MQ=48.96;MQ0=22;MQRankSum=-10.563;QD=20.49;ReadPosRankSum=4.638;VQSLOD=3.3850;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:50:45.40:0,45,1083	1/1:2,8:11:21.07:411,21,0	0/0:63,0:20:21.07:0,21,565	0/0:66,0:17:18.06:0,18,460	1/1:7,11:18:18.06:351,18,0	1/1:15,0:27:14.63:209,15,0	1/1:12,0:28:33.09:438,33,0	0/0:32,0:38:58.73:0,59,1460	1/1:12,15:28:43.02:802,43,0	1/1:13,15:30:41.91:889,42,0	1/1:8,6:14:9.03:188,9,0	1/1:13,21:36:51.17:1042,51,0	1/1:4,16:21:36.59:727,37,0	1/1:9,16:26:24.08:479,24,0	1/1:18,22:43:47.05:938,47,0	1/1:5,9:15:21.07:416,21,0	1/1:8,7:15:18.06:355,18,0	1/1:14,7:21:13.24:210,13,0	0/0:17,0:19:24.08:0,24,600	0/0:12,0:21:33.11:0,33,834	0/0:40,0:66:78.25:0,78,2087	1/1:13,8:21:15.04:277,15,0	1/1:9,1:11:6.02:73,6,0	0/1:15,8:25:0.20:0,0,0	0/0:19,0:20:39.12:0,39,977	1/1:9,8:16:15.02:273,15,0	1/1:11,15:26:42.14:876,42,0	1/1:2,2:4:2.83:62,3,0
chr10	12831784	.	G	GA	2222.51	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=-10.173;DP=653;FS=2.072;HRun=8;HaplotypeScore=92.2659;InbreedingCoeff=0.8836;MQ=58.42;MQ0=1;MQRankSum=-0.047;QD=21.17;ReadPosRankSum=-3.200;VQSLOD=2.3386;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,111,1006	0/0:8,0:8:11.63:0,12,66	0/1:11,0:8:0.98:1,0,102	0/0:8,0:4:5.59:0,6,36	0/0:27,0:27:32.73:0,33,279	0/0:19,0:19:52.72:0,53,330	0/0:26,0:24:51.75:0,52,292	1/1:9,21:30:63.14:711,63,0	0/0:25,0:25:52.56:0,53,328	0/0:29,1:28:54.40:0,54,394	0/0:21,0:22:27.62:0,28,169	0/0:23,0:23:46.82:0,47,312	0/0:19,0:19:34.66:0,35,218	0/0:21,0:21:41.17:0,41,282	0/0:30,0:30:61.38:0,61,407	0/0:31,0:30:70.55:0,71,476	0/0:40,0:41:61.67:0,62,539	0/0:21,0:21:51.97:0,52,340	1/1:4,7:11:24.07:276,24,0	1/1:6,35:40:96.24:1091,96,0	1/1:3,9:12:27.07:303,27,0	0/0:23,0:23:46.27:0,46,293	0/0:21,0:21:40.06:0,40,247	0/0:28,0:28:58.10:0,58,357	0/0:25,0:25:66.03:0,66,604	0/0:18,0:18:39.24:0,39,301	0/0:29,0:29:42.98:0,43,311	0/0:10,0:10:16.43:0,16,97
chr10	12831793	.	G	GA	10192.24	PASS	AB=0.593;AC=39;AF=0.696;AN=56;BaseQRankSum=-13.496;DP=676;FS=1.975;HRun=9;HaplotypeScore=77.0924;InbreedingCoeff=0.9012;MQ=61.89;MQ0=0;MQRankSum=0.462;QD=21.55;ReadPosRankSum=5.422;VQSLOD=5.3553;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,123,1067	1/1:0,7:7:12.03:133,12,0	0/0:13,0:10:29.74:0,30,233	0/0:10,0:6:14.22:0,14,111	1/1:5,22:27:60.12:643,60,0	1/1:3,20:23:51.11:552,51,0	1/1:15,16:29:66.12:704,66,0	0/0:33,0:33:84.34:0,84,582	1/1:5,18:24:47.96:512,48,0	1/1:9,21:29:60.16:661,60,0	1/1:2,14:16:33.09:363,33,0	1/1:3,20:23:47.99:531,48,0	1/1:2,15:17:32.71:351,33,0	1/1:4,16:20:32.92:365,33,0	1/1:5,26:31:54.15:597,54,0	1/1:7,25:31:57.15:631,57,0	1/1:6,38:44:79.92:1080,80,0	1/1:6,14:20:42.09:453,42,0	0/0:17,0:17:26.17:0,26,306	0/0:45,0:44:19.17:0,19,469	0/0:12,0:12:32.06:0,32,194	1/1:2,25:27:63.17:691,63,0	1/1:5,17:22:10.14:339,10,0	1/1:2,26:28:54.15:597,54,0	0/0:29,0:29:74.97:0,75,650	0/1:5,11:16:11.98:315,0,12	1/1:4,22:27:47.96:508,48,0	1/1:1,7:8:15.04:166,15,0
chr10	12832924	.	TAGCAGAACATCCG	T	34633.59	PASS	AB=0.600;AC=39;AF=0.696;AN=56;BaseQRankSum=18.746;DP=681;FS=7.315;HRun=0;HaplotypeScore=303.1737;InbreedingCoeff=0.9104;MQ=64.35;MQ0=2;MQRankSum=-19.382;QD=79.43;ReadPosRankSum=7.394;VQSLOD=3.1631;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,141,8716	0/1:2,4:6:99:464,0,183	0/0:19,0:18:51.17:0,51,2338	0/0:18,0:18:50.96:0,51,2592	1/1:7,20:27:36.12:1134,36,0	1/1:2,14:16:42.14:1597,42,0	1/1:8,9:17:27.09:1034,27,0	0/0:44,0:44:99:0,111,6549	1/1:2,28:30:78.27:3034,78,0	1/1:3,24:27:72.23:2781,72,0	1/1:6,11:17:27.09:871,27,0	1/1:10,22:32:57.20:2274,57,0	1/1:7,24:31:60.20:2234,60,0	1/1:4,19:23:54.19:2093,54,0	1/1:9,35:44:96.33:3651,96,0	1/1:6,30:36:90.31:3595,90,0	1/1:5,16:21:30.10:1135,30,0	1/1:3,5:8:15.05:599,15,0	0/0:16,0:16:48.15:0,48,2301	0/0:26,0:26:72.25:0,72,4377	0/0:53,0:51:99:0,148,9174	1/1:2,11:13:30.10:974,30,0	1/1:2,7:9:18.06:657,18,0	1/1:8,13:21:25.33:814,25,0	0/0:21,0:21:63.22:0,63,3981	1/1:4,12:16:36.10:1340,36,0	1/1:2,32:34:90.31:3515,90,0	1/1:1,7:8:21.07:839,21,0
chr10	12833249	.	T	TCTA	20192.58	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-12.558;DP=529;FS=14.981;HRun=0;HaplotypeScore=58.6200;InbreedingCoeff=0.9647;MQ=66.32;MQ0=0;MQRankSum=-1.280;QD=54.28;ReadPosRankSum=4.079;VQSLOD=5.5450;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,108,1747	1/1:1,8:9:24.08:544,24,0	0/0:10,0:10:24:0,24,340	0/0:2,0:3:5.97:0,6,69	1/1:1,23:24:57.20:1213,57,0	1/1:2,16:19:33.11:745,33,0	1/1:1,7:8:12.04:259,12,0	0/0:31,0:31:84.28:0,84,1371	1/1:2,14:16:39.13:865,39,0	1/1:2,15:17:48.15:1005,48,0	1/1:1,17:18:48.16:1025,48,0	1/1:1,12:13:30.10:680,30,0	1/1:2,23:26:66.23:1464,66,0	1/1:1,20:22:54.19:1208,54,0	1/1:0,25:25:63.22:1425,63,0	1/1:3,24:27:66.23:1482,66,0	1/1:0,22:23:60.21:1358,60,0	1/1:2,18:21:51.11:1105,51,0	0/0:20,0:20:57.19:0,57,948	0/0:26,0:26:75.23:0,75,1198	0/0:9,0:9:24.08:0,24,400	1/1:1,2:3:9.03:190,9,0	1/1:0,14:14:42.14:931,42,0	1/1:0,11:11:27.09:609,27,0	0/0:20,0:20:60.21:0,60,999	1/1:2,26:29:81.23:1704,81,0	1/1:3,32:37:90.27:1974,90,0	1/1:2,8:10:18.06:408,18,0
chr10	12833654	.	AT	A	7696.93	PASS	AB=0.900;AC=41;AF=0.732;AN=56;BaseQRankSum=14.538;DP=518;FS=57.923;HRun=9;HaplotypeScore=82.7878;InbreedingCoeff=0.9484;MQ=81.93;MQ0=0;MQRankSum=-4.717;QD=22.51;ReadPosRankSum=6.628;VQSLOD=0.9151;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,3:37:19.55:0,20,916	1/1:0,6:6:18.01:165,18,0	0/0:18,0:18:18.14:0,18,414	0/0:21,0:20:50.72:0,51,547	1/1:3,22:25:38.46:523,38,0	1/1:2,15:17:42.02:384,42,0	1/1:3,17:20:47.06:418,47,0	0/0:36,1:37:62.77:0,63,952	1/1:3,13:16:36.01:329,36,0	1/1:0,18:18:54.03:494,54,0	1/1:1,21:22:60.03:549,60,0	1/1:3,14:17:39.01:357,39,0	1/1:0,12:12:36.02:330,36,0	1/1:1,12:13:36.02:329,36,0	1/1:2,13:15:36.01:329,36,0	1/1:1,14:15:39.02:357,39,0	1/1:0,14:14:39.02:357,39,0	1/1:2,25:27:69.03:631,69,0	0/0:19,0:19:42.12:0,42,485	0/0:26,0:26:78.23:0,78,900	0/0:18,0:18:48.13:0,48,543	1/1:0,16:16:39.01:357,39,0	1/1:1,25:27:67.99:610,68,0	1/1:2,18:20:51.03:467,51,0	0/1:8,1:9:0.39:0,0,250	1/1:3,8:11:24:215,24,0	1/1:2,12:14:33.01:302,33,0	1/1:1,7:8:21.01:192,21,0
chr10	12833816	.	CT	C	7657.49	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=10.889;DP=455;FS=14.771;HRun=3;HaplotypeScore=69.9336;InbreedingCoeff=0.9925;MQ=89.91;MQ0=0;MQRankSum=-9.352;QD=28.90;ReadPosRankSum=5.508;VQSLOD=3.1263;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:90.27:0,90,1258	1/1:0,6:6:18.06:223,18,0	0/0:18,0:18:54.18:0,54,751	0/0:31,0:30:86.46:0,86,1138	1/1:1,14:14:30.09:372,30,0	1/1:0,11:11:30.09:370,30,0	1/1:1,8:9:24.01:278,24,0	0/0:30,0:30:84.26:0,84,1163	1/1:2,10:12:24.07:297,24,0	1/1:2,11:13:30.09:372,30,0	1/1:4,12:15:24.07:297,24,0	1/1:0,12:12:30.04:352,30,0	1/1:1,13:14:27.08:334,27,0	1/1:0,21:21:51.09:611,51,0	1/1:2,15:17:39.07:465,39,0	1/1:2,13:15:39.12:482,39,0	1/1:1,18:19:51.05:592,51,0	1/1:0,10:10:27.08:335,27,0	0/0:24,0:24:72.15:0,72,930	0/0:14,0:14:42:0,42,560	0/0:30,0:30:87.22:0,87,1172	1/1:1,7:8:15.05:185,15,0	1/1:0,15:15:33.10:407,33,0	1/1:0,9:9:18.06:222,18,0	0/0:11,0:11:33.11:0,33,475	1/1:0,15:15:41.80:517,42,0	1/1:0,19:19:54.17:668,54,0	1/1:0,9:9:24.03:278,24,0
chr10	12834055	.	C	CTTT	6120.98	PASS	AB=1.000;AC=43;AF=0.768;AN=56;BaseQRankSum=-1.638;DP=574;FS=0.495;HRun=13;HaplotypeScore=77.9494;InbreedingCoeff=0.6645;MQ=62.93;MQ0=4;MQRankSum=-4.350;QD=13.48;ReadPosRankSum=-1.439;VQSLOD=2.5561;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:58:67.49:0,67,988	1/1:4,2:6:11.54:151,12,0	0/0:20,0:14:10.34:0,10,84	0/1:9,0:6:10.37:10,0,38	1/1:2,13:18:32.98:450,33,0	1/1:4,16:23:21.05:333,21,0	1/1:5,14:21:15.50:237,16,0	0/1:11,0:26:18.03:18,0,97	1/1:5,13:20:14.99:176,15,0	1/1:5,11:18:36.74:382,37,0	1/1:4,7:11:23.83:310,24,0	1/1:1,25:27:24.94:386,25,0	1/1:5,13:19:11.87:150,12,0	1/1:18,4:24:33.73:366,34,0	1/1:7,23:35:36.01:469,36,0	1/1:3,11:15:15.03:237,15,0	1/1:2,27:33:35.36:475,35,0	1/1:3,9:14:15.03:226,15,0	0/0:4,0:12:18.16:0,18,96	0/1:3,0:18:18.69:19,0,98	0/0:3,0:16:29.22:0,29,175	1/1:3,9:12:17.96:253,18,0	1/1:2,10:12:8.99:127,9,0	1/1:2,19:27:30.04:422,30,0	0/0:12,0:13:25.74:0,26,311	1/1:13,0:29:50.58:440,51,0	1/1:4,20:25:17.91:291,18,0	1/1:1,3:7:15.01:195,15,0
chr10	12835300	.	A	AACAC	2914.25	PASS	AB=0.882;AC=50;AF=0.962;AN=52;BaseQRankSum=-0.407;DP=600;FS=6.155;HRun=0;HaplotypeScore=161.3829;InbreedingCoeff=-0.0763;MQ=64.86;MQ0=14;MQRankSum=0.291;QD=5.54;ReadPosRankSum=0.686;VQSLOD=2.0428;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:26:15.02:204,15,0	1/1:6,0:6:2.98:21,3,0	./.	./.	1/1:16,0:16:8.98:148,9,0	1/1:26,0:26:10.28:178,10,0	1/1:19,2:24:3.01:70,3,0	1/1:31,0:30:8.67:51,9,0	1/1:24,0:22:17.94:220,18,0	1/1:22,0:21:6.47:54,6,0	1/1:15,4:20:3.01:70,3,0	1/1:18,0:17:5.03:29,5,0	0/1:18,4:25:8.66:198,0,9	1/1:14,3:17:6.49:140,6,0	1/1:15,5:20:2.51:149,3,0	1/1:22,6:28:15.67:288,16,0	0/1:32,0:30:6.13:227,0,6	1/1:14,0:13:3.87:25,4,0	1/1:13,0:11:9.68:77,10,0	1/1:8,2:10:3.01:70,3,0	1/1:35,0:34:14.99:189,15,0	1/1:6,0:5:3:42,3,0	1/1:15,0:15:5.99:49,6,0	1/1:21,6:31:9.03:209,9,0	1/1:13,1:13:1.25:3,1,0	1/1:16,6:21:15.45:177,15,0	1/1:17,4:23:5.70:79,6,0	1/1:3,0:3:2.87:35,3,0
chr10	12835712	.	AT	A	18367.54	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=18.608;DP=748;FS=1.970;HRun=1;HaplotypeScore=117.9493;InbreedingCoeff=0.9993;MQ=85.48;MQ0=1;MQRankSum=-4.851;QD=37.56;ReadPosRankSum=8.053;VQSLOD=3.7926;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,111,1694	1/1:0,9:9:24.08:335,24,0	0/0:32,0:32:93.29:0,93,1445	0/0:34,0:32:81.91:0,82,1263	1/1:0,31:31:84.24:1151,84,0	1/1:0,31:31:81.27:1132,81,0	1/1:1,28:29:84.28:1165,84,0	0/0:32,1:32:96.27:0,96,1407	1/1:0,18:18:45.15:628,45,0	1/1:0,29:29:87.29:1213,87,0	1/1:0,24:24:54.18:754,54,0	1/1:0,29:29:66.21:921,66,0	1/1:1,24:25:63.21:869,63,0	1/1:0,32:32:87.29:1209,87,0	1/1:0,40:40:99:1593,114,0	1/1:0,20:20:51.17:713,51,0	1/1:0,16:16:42.14:587,42,0	1/1:0,23:23:60.20:838,60,0	0/0:24,0:23:69.22:0,69,1060	0/0:21,0:21:63.19:0,63,978	0/0:54,0:54:99:0,163,2543	1/1:0,25:25:72.24:1005,72,0	1/1:0,18:18:51.17:712,51,0	1/1:0,24:24:72.24:1006,72,0	0/0:24,0:24:72.25:0,72,1149	1/1:0,26:26:75.25:1039,75,0	1/1:1,31:32:84.28:1163,84,0	1/1:0,8:8:24.08:335,24,0
chr10	12836247	.	C	CTTT	3985.24	PASS	AB=0.604;AC=36;AF=0.643;AN=56;BaseQRankSum=8.921;DP=530;FS=8.634;HRun=11;HaplotypeScore=88.4792;InbreedingCoeff=0.6986;MQ=62.57;MQ0=3;MQRankSum=-2.016;QD=11.42;ReadPosRankSum=2.226;VQSLOD=0.5922;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:33:91.11:0,91,1003	1/1:4,0:10:10.20:72,10,0	0/0:14,0:8:11.49:0,11,127	0/0:12,0:9:17.50:0,17,173	1/1:8,1:27:12.25:288,12,0	1/1:1,0:20:32.38:234,32,0	0/1:6,1:17:2.90:112,0,3	0/0:30,0:34:52.51:0,53,523	0/1:3,0:8:20.10:77,0,20	1/1:5,1:15:15.31:149,15,0	1/1:1,0:18:25.07:173,25,0	1/1:4,1:17:13.22:128,13,0	1/1:3,0:17:20.94:167,21,0	1/1:2,0:14:29.11:214,29,0	1/1:2,0:19:28.14:209,28,0	0/1:5,0:16:6.77:158,0,7	1/1:3,1:13:20.96:212,21,0	0/1:6,0:18:40.03:134,0,40	0/0:19,0:19:45:0,45,506	0/0:26,0:27:34.52:0,35,504	0/0:17,0:17:44.05:0,44,518	1/1:7,2:18:17.89:197,18,0	1/1:4,0:22:36.58:277,37,0	1/1:8,0:18:28.75:258,29,0	0/0:23,0:25:60.91:0,61,639	1/1:3,0:20:15.81:355,16,0	1/1:3,0:17:27.28:266,27,0	1/1:2,0:19:40.11:304,40,0
chr10	12836384	.	AT	A	8416.96	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=8.156;DP=547;FS=1.041;HRun=10;HaplotypeScore=92.0192;InbreedingCoeff=0.9230;MQ=68.44;MQ0=1;MQRankSum=-2.005;QD=18.26;ReadPosRankSum=0.209;VQSLOD=5.1377;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:87.22:0,87,953	1/1:1,7:8:21:182,21,0	0/0:14,1:13:0.49:0,0,212	0/0:11,0:9:17.40:0,17,163	1/1:6,21:27:62.66:522,63,0	1/1:2,18:20:47.99:416,48,0	1/1:0,11:11:32.99:286,33,0	1/1:2,0:22:40.74:119,41,0	1/1:1,22:23:59.99:520,60,0	1/1:1,23:24:68.45:575,68,0	1/1:1,15:16:44.99:390,45,0	1/1:3,16:19:50.96:427,51,0	1/1:1,12:14:32.99:284,33,0	1/1:0,15:15:35.99:312,36,0	1/1:2,17:19:41.99:364,42,0	1/1:2,18:20:50.98:442,51,0	1/1:0,24:24:56.99:494,57,0	1/1:4,21:24:47.98:416,48,0	1/1:6,0:19:27.12:83,27,0	1/1:1,0:25:49.01:158,49,0	1/1:1,0:30:52.96:156,53,0	1/1:1,14:15:39.46:339,39,0	1/1:1,13:14:38.99:338,39,0	1/1:0,17:17:47.99:416,48,0	0/0:23,0:23:63.15:0,63,686	1/1:2,14:16:41.57:344,42,0	1/1:1,19:20:47.99:416,48,0	1/1:1,16:17:47.99:416,48,0
chr10	12836983	.	C	CTTTTG	25466.11	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=9.458;DP=686;FS=7.933;HRun=0;HaplotypeScore=152.0474;InbreedingCoeff=0.9961;MQ=65.21;MQ0=0;MQRankSum=-16.544;QD=53.84;ReadPosRankSum=0.821;VQSLOD=5.2240;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:81.26:0,81,1495	1/1:7,7:15:21.07:610,21,0	0/0:25,0:23:42.14:0,42,790	0/0:25,0:25:36.74:0,37,563	1/1:11,18:30:54.18:1465,54,0	1/1:7,24:33:75.26:2100,75,0	1/1:10,14:24:45.15:1280,45,0	0/0:31,0:31:51.17:0,51,962	1/1:10,13:25:45.15:1276,45,0	1/1:9,22:33:81.28:2137,81,0	1/1:15,9:24:33.11:861,33,0	1/1:5,13:21:48.16:1331,48,0	1/1:9,16:27:54.19:1530,54,0	1/1:2,12:15:39.13:1121,39,0	1/1:7,19:26:60.21:1711,60,0	1/1:10,12:23:48.16:1358,48,0	1/1:12,10:22:51.17:1368,51,0	1/1:7,6:14:24.08:689,24,0	0/0:23,0:23:48.16:0,48,912	0/0:25,0:25:66.23:0,66,1262	0/0:33,0:33:75.24:0,75,1382	1/1:7,9:17:27.09:784,27,0	1/1:5,12:17:36.12:987,36,0	1/1:15,13:29:48.16:1344,48,0	0/0:21,0:21:54.12:0,54,960	1/1:15,21:36:66.20:1793,66,0	1/1:17,15:34:45.15:1286,45,0	1/1:2,5:7:15.05:436,15,0
chr10	12837215	.	CAG	C	14852.99	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=14.492;DP=584;FS=11.485;HRun=0;HaplotypeScore=109.2698;InbreedingCoeff=0.9936;MQ=70.78;MQ0=3;MQRankSum=-6.627;QD=36.86;ReadPosRankSum=6.890;VQSLOD=6.4215;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,108,1973	1/1:1,8:9:27.09:389,27,0	0/0:22,0:22:61.76:0,62,1088	0/0:22,0:22:27.32:0,27,1030	1/1:1,28:29:69.23:1015,69,0	1/1:2,28:30:69.23:1006,69,0	1/1:1,25:26:57.19:839,57,0	0/0:23,0:23:60.20:0,60,1092	1/1:0,17:16:48.16:697,48,0	1/1:0,21:21:60.20:882,60,0	1/1:1,23:24:66.22:971,66,0	1/1:0,9:8:21.07:309,21,0	1/1:1,12:13:33.11:485,33,0	1/1:0,13:13:30.10:441,30,0	1/1:0,22:22:57.19:838,57,0	1/1:1,23:24:57.19:838,57,0	1/1:1,31:31:75.25:1104,75,0	1/1:1,16:17:45.15:662,45,0	0/0:28,0:28:78.26:0,78,1421	0/0:18,0:18:54.17:0,54,972	0/0:18,0:18:54.19:0,54,1011	1/1:0,16:16:42.14:618,42,0	1/1:0,15:15:36.11:529,36,0	1/1:1,28:29:72.24:1050,72,0	0/0:10,0:10:30.10:0,30,536	1/1:2,20:22:63.20:901,63,0	1/1:0,28:27:75.25:1103,75,0	1/1:0,7:7:12.04:176,12,0
chr10	12837899	.	AACAG	A	1721.85	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=4.601;DP=548;FS=4.819;HRun=0;HaplotypeScore=136.3502;InbreedingCoeff=0.9718;MQ=67.80;MQ0=0;MQRankSum=-8.557;QD=26.90;ReadPosRankSum=-5.400;VQSLOD=2.0724;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,99,2455	0/0:6,0:6:18.06:0,18,465	0/0:15,0:15:39.13:0,39,913	0/0:15,0:15:33.58:0,34,832	0/0:12,0:12:24.08:0,24,596	0/0:21,0:21:54.19:0,54,1320	0/0:22,0:22:57.20:0,57,1490	1/1:4,12:16:48.08:791,48,0	0/0:17,0:17:42.14:0,42,1019	0/0:26,0:26:75.25:0,75,1732	0/0:15,0:15:36.11:0,36,881	0/0:21,0:21:54.17:0,54,1340	0/0:21,0:21:57.17:0,57,1405	0/0:24,0:24:66.19:0,66,1511	0/0:26,0:26:69.21:0,69,1695	0/0:27,0:27:78.24:0,78,1853	0/0:25,0:25:63.22:0,63,1646	0/0:16,0:16:48.15:0,48,1190	1/1:7,4:11:24.05:352,24,0	1/1:0,10:10:12.04:187,12,0	1/1:13,14:27:41.52:550,42,0	0/0:24,0:24:54.19:0,54,1388	0/0:15,0:15:33.10:0,33,777	0/0:29,0:29:81.73:0,82,2045	0/0:18,0:18:48.16:0,48,1215	0/0:27,0:27:72.25:0,72,1875	0/0:23,0:23:66.20:0,66,1639	0/0:4,0:4:9.03:0,9,236
chr10	12837913	.	A	AG	16460.11	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-7.735;DP=540;FS=7.750;HRun=2;HaplotypeScore=61.8513;InbreedingCoeff=0.9775;MQ=70.33;MQ0=0;MQRankSum=-5.565;QD=35.78;ReadPosRankSum=2.104;VQSLOD=5.2704;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,102,1245	1/1:1,6:7:15.05:216,15,0	0/0:18,0:18:48.12:0,48,574	0/0:11,0:11:30.09:0,30,358	1/1:1,12:14:27.09:381,27,0	1/1:2,17:19:45.15:648,45,0	1/1:2,21:23:60.16:831,60,0	1/1:2,17:19:54.18:772,54,0	1/1:0,13:13:36.12:518,36,0	1/1:1,19:20:57.13:771,57,0	1/1:2,12:14:33.11:475,33,0	1/1:0,19:19:48.05:690,48,0	1/1:0,21:21:57.19:820,57,0	1/1:1,18:19:54.18:776,54,0	1/1:0,24:24:66.22:950,66,0	1/1:2,21:23:63.21:900,63,0	1/1:1,28:29:69.23:994,69,0	1/1:2,15:17:45.15:648,45,0	1/1:2,12:14:39.13:551,39,0	1/1:4,4:8:9.03:128,9,0	1/1:6,25:31:50.96:693,51,0	1/1:2,22:24:54.18:777,54,0	1/1:0,9:9:24.08:345,24,0	1/1:1,31:32:82.21:1206,82,0	0/0:16,0:16:48.15:0,48,591	1/1:1,21:22:63.17:867,63,0	1/1:0,28:28:84.28:1208,84,0	1/1:0,11:11:21.07:295,21,0
chr10	12838261	.	ATGTGTGTGTGTG	A	14147.49	PASS	AB=0.676;AC=37;AF=0.661;AN=56;BaseQRankSum=9.591;DP=566;FS=1.063;HRun=0;HaplotypeScore=199.4987;InbreedingCoeff=0.6918;MQ=50.32;MQ0=10;MQRankSum=-7.775;QD=36.65;ReadPosRankSum=1.949;VQSLOD=4.4938;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:34:40.69:0,41,2621	1/1:2,7:9:15.05:523,15,0	0/0:26,0:13:3.01:0,3,73	0/0:23,0:15:9.03:0,9,304	1/1:11,10:22:17.97:370,18,0	1/1:6,12:18:21.03:649,21,0	0/1:10,5:17:72.52:317,0,73	0/0:23,0:23:30.57:0,31,1147	1/1:3,7:10:18.06:628,18,0	1/1:8,12:20:38.49:1090,38,0	1/1:11,12:23:29.90:584,30,0	1/1:9,16:26:30.10:907,30,0	0/1:7,11:19:97.19:635,0,97	1/1:8,18:25:51.06:1259,51,0	1/1:11,18:29:36.07:1104,36,0	1/1:8,7:16:24.04:567,24,0	1/1:12,14:26:13.53:521,14,0	0/1:7,5:12:26.36:302,0,26	0/0:15,0:14:22.61:0,23,635	0/0:12,0:20:15.01:0,15,273	0/0:9,0:13:15.05:0,15,594	1/1:10,11:21:27.04:625,27,0	1/1:9,10:20:33.02:893,33,0	1/1:8,7:14:9.03:314,9,0	0/0:23,0:25:63.21:0,63,3186	1/1:11,16:28:51.17:1402,51,0	1/1:6,16:22:39.10:1146,39,0	1/1:3,3:5:9.03:314,9,0
chr10	12839037	.	G	GTC	27765.11	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-12.559;DP=703;FS=28.205;HRun=0;HaplotypeScore=75.5399;InbreedingCoeff=0.9959;MQ=81.28;MQ0=1;MQRankSum=-3.898;QD=47.46;ReadPosRankSum=3.308;VQSLOD=3.6462;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,159,2234	1/1:0,9:9:21.07:385,21,0	0/0:25,0:25:63.19:0,63,875	0/0:17,0:17:48.13:0,48,666	1/1:0,18:18:45.15:825,45,0	1/1:0,22:22:66.23:1210,66,0	1/1:1,21:24:54.19:990,54,0	1/1:2,27:29:78.27:1431,78,0	1/1:1,25:26:66.20:1210,66,0	1/1:2,28:31:87.27:1521,87,0	1/1:1,10:11:18.06:330,18,0	1/1:1,25:27:69.24:1264,69,0	1/1:1,27:28:78.27:1428,78,0	1/1:1,29:30:72.25:1320,72,0	1/1:1,24:26:72.25:1320,72,0	1/1:3,18:21:45.15:824,45,0	1/1:2,25:27:69.24:1265,69,0	1/1:2,22:24:60.21:1099,60,0	1/1:0,22:22:66.21:1180,66,0	1/1:0,15:15:42.14:770,42,0	1/1:4,55:60:99:2860,157,0	1/1:0,25:25:57.20:1044,57,0	1/1:0,10:10:30.10:549,30,0	1/1:1,43:44:99:2199,120,0	0/0:22,0:22:60.19:0,60,843	1/1:0,26:27:81.28:1478,81,0	1/1:3,16:19:45.15:825,45,0	1/1:0,9:9:24.08:440,24,0
chr10	12839881	.	C	CA	2317.12	PASS	AB=0.994;AC=27;AF=0.482;AN=56;BaseQRankSum=15.001;DP=651;FS=1.479;HRun=0;HaplotypeScore=190.3384;InbreedingCoeff=-0.3042;MQ=60.12;MQ0=2;MQRankSum=-0.822;QD=4.38;ReadPosRankSum=9.550;VQSLOD=2.7060;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,141,1844	0/0:9,0:9:0.89:0,1,77	0/0:18,0:15:42.04:0,42,511	0/0:28,0:21:51.78:0,52,584	0/1:14,1:15:14.32:14,0,108	0/1:19,0:19:23.75:24,0,93	0/1:41,0:41:24.99:25,0,214	1/1:7,21:28:64.39:643,64,0	0/1:23,0:23:17.06:17,0,73	0/1:20,0:20:6.08:6,0,230	0/1:20,1:21:8.59:9,0,92	0/1:27,0:27:32.77:33,0,159	0/1:16,0:16:3.48:3,0,193	0/1:25,0:25:25.18:25,0,113	0/1:22,0:22:23.23:23,0,113	0/1:18,0:18:33.16:33,0,131	0/1:30,0:30:33.50:33,0,72	0/1:44,0:44:71.05:71,0,212	1/1:6,11:17:39.89:338,40,0	1/1:2,8:10:14.24:299,14,0	1/1:6,33:38:48.69:743,49,0	0/1:16,0:15:6.58:7,0,141	0/1:17,0:17:16.67:17,0,121	0/1:42,0:42:94.22:94,0,100	0/0:17,0:17:48.16:0,48,668	0/1:16,0:16:14.18:14,0,66	0/1:14,0:14:6.45:6,0,125	0/1:9,0:9:6.37:6,0,50
chr10	12839882	.	C	CA	6284.12	PASS	AB=0.672;AC=36;AF=0.643;AN=56;BaseQRankSum=9.407;DP=647;FS=1.845;HRun=0;HaplotypeScore=177.1517;InbreedingCoeff=0.6075;MQ=59.33;MQ0=2;MQRankSum=-0.109;QD=14.22;ReadPosRankSum=7.461;VQSLOD=5.8765;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,147,1893	0/1:6,3:9:12.98:48,0,13	0/0:18,0:15:44.79:0,45,504	0/0:27,0:20:48.80:0,49,564	1/1:8,7:15:0.39:119,0,0	1/1:5,14:19:23.48:332,23,0	0/1:16,24:40:7.96:552,0,8	0/0:28,0:28:24.09:0,24,122	1/1:8,15:23:34.80:381,35,0	0/1:11,10:21:6.27:243,0,6	1/1:6,15:21:14.79:233,15,0	1/1:9,18:27:25.69:422,26,0	1/1:6,8:14:4.21:141,4,0	1/1:9,16:25:33.15:364,33,0	1/1:9,13:22:29.71:351,30,0	1/1:9,9:18:5.16:210,5,0	1/1:9,21:30:27.38:480,27,0	1/1:14,30:44:50.44:762,50,0	0/0:15,0:15:24.31:0,24,112	0/0:10,0:10:16.50:0,17,66	0/0:41,0:40:39.55:0,40,183	1/1:7,10:16:1.73:207,2,0	1/1:8,9:17:3.24:163,3,0	1/1:16,26:42:33.53:609,34,0	0/0:16,0:16:48.16:0,48,668	1/1:4,11:15:28.93:339,29,0	0/1:6,8:14:3.62:167,0,4	1/1:4,5:9:12.15:161,12,0
chr10	12839883	.	C	CA	7990.50	PASS	AB=0.668;AC=40;AF=0.714;AN=56;BaseQRankSum=13.244;DP=645;FS=12.740;HRun=0;HaplotypeScore=170.1815;InbreedingCoeff=0.3416;MQ=60.11;MQ0=2;MQRankSum=-1.291;QD=14.96;ReadPosRankSum=8.230;VQSLOD=5.1825;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,147,1891	0/1:6,3:9:9.43:64,0,9	0/0:18,0:15:42.03:0,42,480	0/0:28,0:21:51.94:0,52,604	0/1:9,7:16:12.39:105,0,12	1/1:5,14:19:15.88:294,16,0	1/1:16,24:40:33.47:546,33,0	1/1:28,0:28:64.94:646,65,0	1/1:7,15:22:14.01:326,14,0	0/1:11,9:21:21.75:224,0,22	1/1:5,15:20:15.10:194,15,0	1/1:8,17:27:22.87:368,23,0	0/1:6,8:14:19.71:119,0,20	1/1:9,16:25:17.35:312,17,0	1/1:9,13:22:21.68:310,22,0	0/1:9,9:18:20.98:202,0,21	1/1:10,21:31:35.45:488,35,0	1/1:13,30:43:36.94:667,37,0	1/1:14,0:14:25.40:287,25,0	1/1:10,0:10:27.07:339,27,0	1/1:41,0:40:74.63:872,75,0	0/1:7,10:16:0.68:199,0,1	0/1:8,9:17:5.74:162,0,6	1/1:16,26:42:63.88:698,64,0	0/0:16,0:16:48.16:0,48,663	1/1:4,11:15:28.94:296,29,0	0/1:6,8:14:24.23:126,0,24	1/1:4,5:9:12.25:146,12,0
chr10	12839884	.	C	CA	5173.85	PASS	AB=0.988;AC=29;AF=0.518;AN=56;BaseQRankSum=9.852;DP=648;FS=1.462;HRun=0;HaplotypeScore=180.1152;InbreedingCoeff=0.2291;MQ=60.10;MQ0=2;MQRankSum=-0.653;QD=11.68;ReadPosRankSum=8.852;VQSLOD=4.8269;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,147,1887	0/1:9,0:9:25.54:38,0,26	0/0:18,0:15:42.01:0,42,475	0/0:28,0:21:47.84:0,48,609	0/1:17,0:17:37.22:96,0,37	0/1:19,0:19:0.51:261,0,1	1/1:39,0:39:25.75:491,26,0	0/0:28,0:28:24.84:0,25,114	1/1:21,1:22:3.50:291,4,0	0/1:21,0:21:52.21:200,0,52	1/1:20,0:20:7.90:184,8,0	1/1:28,0:28:2.27:341,2,0	0/1:14,0:14:22.79:113,0,23	1/1:24,1:25:5.11:283,5,0	0/1:23,0:23:0.03:275,0,0	0/1:19,0:19:29.82:178,0,30	0/1:29,1:31:0.21:402,0,0	1/1:41,0:41:18.55:607,19,0	0/0:15,0:15:26.14:0,26,107	0/0:10,0:10:10.43:0,10,43	0/0:41,0:40:32.47:0,32,152	0/1:17,0:16:25.01:169,0,25	0/1:19,0:19:22.29:137,0,22	1/1:42,0:42:33.25:541,33,0	0/0:16,0:16:48.16:0,48,658	1/1:15,0:15:25.40:301,25,0	0/1:12,1:13:20.09:127,0,20	1/1:9,0:9:10.32:141,10,0
chr10	12839885	.	C	CA	10955.13	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=11.549;DP=673;FS=2.745;HRun=0;HaplotypeScore=173.8304;InbreedingCoeff=0.9821;MQ=59.32;MQ0=2;MQRankSum=-1.075;QD=19.46;ReadPosRankSum=3.056;VQSLOD=5.6523;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:47:99:0,141,1745	1/1:10,0:10:11.17:97,11,0	0/0:20,0:17:41.52:0,42,436	0/0:27,0:20:44.79:0,45,550	1/1:18,0:18:22.06:207,22,0	1/1:19,0:19:39.64:401,40,0	1/1:42,0:42:91.87:805,92,0	1/1:32,0:32:77.22:746,77,0	1/1:21,1:22:55.57:481,56,0	1/1:22,0:22:28.88:353,29,0	1/1:21,0:21:23.02:255,23,0	1/1:29,0:29:52.37:554,52,0	1/1:15,0:15:22.36:209,22,0	1/1:25,1:26:57.43:491,57,0	1/1:26,0:26:59.16:506,59,0	1/1:19,0:19:33.47:308,33,0	1/1:31,1:33:74.68:686,75,0	1/1:40,0:40:80.23:906,80,0	1/1:15,0:15:38.24:348,38,0	1/1:10,0:10:27.07:338,27,0	1/1:42,0:41:80.71:922,81,0	1/1:17,0:16:25.58:291,26,0	1/1:19,0:19:36.24:297,36,0	1/1:45,0:45:93.74:919,94,0	0/0:16,0:16:48.16:0,48,647	1/1:17,0:17:36.20:386,36,0	1/1:14,1:15:17.74:254,18,0	1/1:9,0:9:18.99:196,19,0
chr10	12840197	.	C	CTTT	9856.34	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-10.226;DP=566;FS=0.885;HRun=12;HaplotypeScore=108.5090;InbreedingCoeff=0.9811;MQ=79.74;MQ0=2;MQRankSum=-4.481;QD=27.08;ReadPosRankSum=-1.634;VQSLOD=3.7145;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:30:58.82:0,59,369	1/1:4,3:8:12.04:198,12,0	0/0:38,0:23:36.63:0,37,328	0/0:26,0:22:13.27:0,13,213	1/1:4,15:26:53.82:697,54,0	1/1:3,10:15:27.05:429,27,0	1/1:7,9:18:33.09:573,33,0	0/0:6,0:22:41.15:0,41,255	1/1:3,8:12:27.07:460,27,0	1/1:6,13:23:60.14:939,60,0	1/1:3,7:14:25.28:376,25,0	1/1:9,14:27:37.17:632,37,0	1/1:3,13:16:30.10:532,30,0	1/1:2,5:10:18.02:264,18,0	1/1:5,8:14:30.10:534,30,0	1/1:7,12:19:33.11:600,33,0	1/1:8,14:29:49.66:724,50,0	1/1:9,11:23:30.06:473,30,0	0/0:9,0:21:35.72:0,36,221	0/0:4,0:17:33.16:0,33,196	0/0:4,0:19:49.76:0,50,294	1/1:6,7:17:40.97:450,41,0	1/1:8,14:23:30.10:506,30,0	1/1:4,4:8:12.93:220,13,0	0/0:6,0:27:49.44:0,49,292	1/1:10,9:21:22.71:445,23,0	1/1:13,9:24:36.06:585,36,0	1/1:10,3:17:15.03:219,15,0
chr10	12841484	.	T	TTCTCTCTCTCTC	1863.68	PASS	AB=1.000;AC=16;AF=0.296;AN=54;BaseQRankSum=-7.549;DP=759;FS=2.862;HRun=0;HaplotypeScore=352.6160;InbreedingCoeff=0.1084;MQ=65.11;MQ0=7;MQRankSum=-1.930;QD=5.66;ReadPosRankSum=-7.404;VQSLOD=-0.3571;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:55:99:0,141,4013	0/0:11,0:11:21.06:0,21,291	0/0:35,0:24:10.75:0,11,248	0/0:36,0:22:12.22:0,12,441	0/1:25,0:26:61.79:62,0,457	0/0:23,0:23:32.84:0,33,445	0/1:24,0:24:59.09:59,0,306	1/1:34,0:32:32.99:679,33,0	0/1:26,0:26:18.25:18,0,673	0/1:29,0:29:42.12:42,0,457	0/1:22,0:22:11.08:11,0,345	0/0:33,0:33:53.12:0,53,931	0/0:31,0:31:12.89:0,13,721	0/1:33,0:33:84.17:84,0,522	0/0:42,0:42:72.94:0,73,1166	0/0:39,0:39:14.98:0,15,880	0/0:22,0:22:31.25:0,31,553	0/0:27,0:27:30.34:0,30,591	1/1:9,4:15:30.05:721,30,0	1/1:11,0:11:11.40:251,11,0	./.	0/0:19,0:19:5.59:0,6,330	0/0:21,0:21:35.77:0,36,487	0/1:36,0:36:25.63:26,0,759	0/0:25,0:25:62.79:0,63,1515	0/1:27,0:27:30.59:31,0,467	0/1:31,0:31:1.10:1,0,868	0/1:14,0:14:47.83:48,0,220
chr10	12841501	.	TCA	T	11200.50	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=13.226;DP=759;FS=27.758;HRun=0;HaplotypeScore=188.4454;InbreedingCoeff=0.9490;MQ=55.50;MQ0=7;MQRankSum=3.235;QD=21.13;ReadPosRankSum=7.415;VQSLOD=3.3312;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:61,2:62:99:0,114,2043	1/1:3,4:8:17.87:182,18,0	0/0:34,0:22:24.20:0,24,417	0/0:29,0:18:17.05:0,17,205	1/1:14,11:29:60.44:554,60,0	1/1:8,14:23:50.86:534,51,0	1/1:9,8:21:32.67:328,33,0	0/0:28,0:23:38.41:0,38,255	1/1:10,14:28:56.57:573,57,0	1/1:13,14:28:56.60:597,57,0	1/1:11,6:20:23.87:251,24,0	1/1:16,20:36:80.94:885,81,0	1/1:9,21:31:72.01:800,72,0	1/1:13,17:31:62.85:651,63,0	1/1:8,33:42:86.96:1017,87,0	1/1:5,31:37:78.03:894,78,0	1/1:2,16:20:43.62:490,44,0	1/1:7,16:24:35.77:387,36,0	0/0:19,0:19:29.24:0,29,202	0/0:10,0:15:3.47:0,3,26	0/0:10,0:10:6.43:0,6,46	1/1:9,10:23:26.87:366,27,0	1/1:3,15:22:18.29:365,18,0	1/1:14,17:33:65.81:719,66,0	0/0:31,0:31:77.96:0,78,969	1/1:7,19:28:62.44:680,62,0	1/1:13,18:33:63.13:721,63,0	1/1:3,10:13:18.04:204,18,0
chr10	12841854	.	T	TCC	1645.46	PASS	AB=0.660;AC=6;AF=0.107;AN=56;BaseQRankSum=11.511;DP=794;FS=4.667;HRun=2;HaplotypeScore=114.3281;InbreedingCoeff=0.6263;MQ=65.68;MQ0=6;MQRankSum=-10.525;QD=18.08;ReadPosRankSum=-1.204;VQSLOD=0.8763;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:59,0:59:99:0,172,2719	0/0:9,0:9:27.06:0,27,381	0/0:44,0:26:53.25:0,53,790	0/0:51,0:32:81.67:0,82,1133	0/0:33,0:33:99:0,99,1527	0/0:22,0:22:60.18:0,60,924	0/0:31,0:31:93.24:0,93,1385	0/1:16,15:31:90.54:504,0,91	0/0:32,0:32:93.31:0,93,1466	0/0:25,0:25:75.25:0,75,1193	0/0:20,0:20:60.20:0,60,971	0/0:24,0:24:66.20:0,66,1025	0/0:35,0:35:99:0,102,1574	0/0:30,0:30:87.26:0,87,1335	0/0:29,0:29:87.26:0,87,1341	0/0:23,0:23:66.21:0,66,1023	0/0:33,0:33:99:0,99,1484	0/0:30,0:29:55.66:0,56,1232	0/1:10,12:19:63.48:367,0,63	1/1:3,12:15:35.20:445,35,0	1/1:8,15:21:42:466,42,0	0/0:28,0:28:81.18:0,81,1242	0/0:20,0:20:60.20:0,60,967	0/0:36,0:36:99:0,108,1749	0/0:26,0:26:75.16:0,75,1142	0/0:22,0:22:66.23:0,66,1071	0/0:20,0:20:60.20:0,60,965	0/0:20,0:20:46.94:0,47,878
chr10	12841855	.	T	TC	739.53	PASS	AB=0.648;AC=5;AF=0.089;AN=56;BaseQRankSum=11.443;DP=800;FS=1.117;HRun=1;HaplotypeScore=103.5891;InbreedingCoeff=0.3658;MQ=66.89;MQ0=6;MQRankSum=-10.373;QD=7.95;ReadPosRankSum=-0.453;VQSLOD=0.6604;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:60,0:60:99:0,178,2250	0/0:9,0:9:27.09:0,27,350	0/0:45,0:26:60.28:0,60,703	0/0:52,0:34:76.60:0,77,886	0/0:33,0:33:96.31:0,96,1236	0/0:22,0:22:66.18:0,66,824	0/0:30,0:30:90.29:0,90,1163	0/1:17,15:32:99:254,0,146	0/0:31,0:31:93.29:0,93,1186	0/0:26,0:26:75.24:0,75,973	0/0:20,0:20:60.20:0,60,778	0/0:24,0:24:69.17:0,69,850	0/0:35,0:35:99:0,102,1291	0/0:30,0:30:90.25:0,90,1125	0/0:27,0:27:81.26:0,81,1039	0/0:23,0:23:69.19:0,69,865	0/0:34,0:34:96.29:0,96,1227	0/0:30,0:29:84.68:0,85,1054	0/1:11,12:20:48.11:210,0,48	1/1:3,12:15:23.60:231,24,0	0/1:8,15:21:10.67:168,0,11	0/0:28,0:28:81.25:0,81,1035	0/0:20,0:20:60.20:0,60,779	0/0:38,0:38:99:0,108,1402	0/0:26,0:26:75.24:0,75,967	0/0:23,0:23:66.21:0,66,857	0/0:20,0:20:60.19:0,60,774	0/0:20,0:20:31.47:0,31,710
chr10	12844148	.	C	CA	172.44	PASS	AC=2;AF=0.33;AN=6;BaseQRankSum=0.898;DP=234;FS=0.000;HRun=11;HaplotypeScore=14.4611;MQ=7.38;MQ0=221;MQRankSum=0.898;QD=9.08;ReadPosRankSum=0.480;VQSLOD=0.1197;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	0/0:3,0:1:2.99:0,3,23	./.	1/1:7,12:10:24.05:243,24,0	./.	./.	./.	./.	./.	./.	./.	0/0:6,0:2:2.99:0,3,23
chr10	12844257	.	AATGAATATATATATATATAT	A	867.97	PASS	AC=12;AF=1.000;AN=12;DP=83;FS=0.000;HRun=0;HaplotypeScore=38.1708;MQ=24.55;MQ0=52;QD=27.12;VQSLOD=0.7906;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	./.	./.	./.	1/1:7,0:2:6.02:79,6,0	./.	./.	./.	1/1:2,1:1:3.01:169,3,0	./.	./.	1/1:1,1:1:3.01:169,3,0	./.	1/1:5,0:3:6.02:85,6,0	1/1:1,6:6:3.01:169,3,0	1/1:8,0:6:18.06:265,18,0	./.	./.	./.	./.	./.	./.	./.	./.	./.
chr10	12844259	.	TGA	T	434.69	PASS	AC=12;AF=1.000;AN=12;DP=73;FS=0.000;HRun=0;HaplotypeScore=21.0851;MQ=26.17;MQ0=42;QD=14.49;VQSLOD=3.0529;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	./.	./.	./.	1/1:3,2:2:6.02:79,6,0	./.	./.	./.	1/1:3,0:1:3:25,3,0	./.	./.	1/1:2,0:1:3:25,3,0	./.	1/1:5,0:3:6.02:85,6,0	1/1:7,0:6:3:25,3,0	1/1:2,6:6:18.06:265,18,0	./.	./.	./.	./.	./.	./.	./.	./.	./.
chr10	12845798	.	CT	C	8033.04	PASS	AB=0.923;AC=41;AF=0.732;AN=56;BaseQRankSum=9.735;DP=615;FS=0.359;HRun=10;HaplotypeScore=71.1245;InbreedingCoeff=0.8976;MQ=73.88;MQ0=1;MQRankSum=-0.404;QD=18.17;ReadPosRankSum=4.439;VQSLOD=5.4711;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,1:39:85.22:0,85,1151	1/1:1,4:5:12:104,12,0	0/0:29,0:20:38.87:0,39,356	0/1:21,1:22:16.52:17,0,154	1/1:6,22:29:67.93:570,68,0	1/1:6,17:23:15.96:313,16,0	1/1:4,8:12:23.99:208,24,0	0/0:18,0:18:45.09:0,45,470	1/1:2,23:25:62.98:547,63,0	1/1:4,19:23:56.98:495,57,0	1/1:3,16:19:44.97:390,45,0	1/1:2,23:25:59.98:521,60,0	1/1:3,20:23:44.98:391,45,0	1/1:5,24:30:59.01:501,59,0	1/1:1,16:17:38.98:339,39,0	1/1:3,16:19:11.81:331,12,0	1/1:6,22:28:59.97:521,60,0	1/1:2,18:20:50.99:443,51,0	0/0:24,0:24:57.11:0,57,595	0/0:17,0:17:45.12:0,45,498	0/0:36,0:36:90.19:0,90,968	1/1:6,19:25:50.98:443,51,0	1/1:2,11:13:29.98:260,30,0	1/1:5,19:24:37.19:449,37,0	0/0:10,0:10:27.07:0,27,299	1/1:4,19:23:56.94:488,57,0	1/1:2,19:21:47.99:417,48,0	1/1:1,13:14:32.95:286,33,0
chr10	12846508	.	A	AT	2110.66	PASS	AB=1.000;AC=9;AF=0.167;AN=54;BaseQRankSum=-9.567;DP=334;FS=0.546;HRun=6;HaplotypeScore=33.4915;InbreedingCoeff=0.8791;MQ=79.95;MQ0=0;MQRankSum=0.467;QD=23.98;ReadPosRankSum=-4.960;VQSLOD=0.7991;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:51.11:0,51,520	0/0:6,0:6:15.03:0,15,153	0/0:12,0:12:20.64:0,21,193	0/1:11,0:10:0.01:0,0,82	0/0:12,0:12:36.08:0,36,367	0/0:13,0:13:36.08:0,36,367	0/0:9,0:9:18.04:0,18,184	1/1:7,29:36:87.23:1052,87,0	0/0:10,0:10:18.04:0,18,184	0/0:11,0:11:30.07:0,30,306	0/0:7,0:7:18.04:0,18,183	0/0:8,0:8:15.03:0,15,153	0/0:5,0:5:12.03:0,12,122	0/0:9,0:9:24.05:0,24,244	0/0:10,0:10:21.04:0,21,214	0/0:11,0:11:30.06:0,30,300	0/0:23,0:23:60.13:0,60,612	0/0:17,0:17:48.07:0,48,474	1/1:2,20:22:60.18:742,60,0	1/1:3,7:10:21.03:247,21,0	1/1:2,7:9:18.06:226,18,0	0/0:5,0:5:9.02:0,9,92	0/0:6,0:6:12.03:0,12,122	./.	0/0:11,0:11:27.06:0,27,275	0/0:8,0:8:21.05:0,21,214	0/0:11,0:11:27.06:0,27,275	0/0:22,0:22:60.14:0,60,612
chr10	12848626	.	G	GA	4482.73	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=-10.811;DP=718;FS=1.627;HRun=2;HaplotypeScore=69.4877;InbreedingCoeff=0.8675;MQ=84.78;MQ0=0;MQRankSum=1.041;QD=29.69;ReadPosRankSum=-0.624;VQSLOD=4.2419;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,135,1525	0/0:10,0:10:30.09:0,30,371	0/1:24,0:24:32.52:33,0,346	0/0:29,0:29:51.29:0,51,710	0/0:26,0:26:75.21:0,75,905	0/0:19,0:19:57.18:0,57,704	0/0:24,0:24:72.10:0,72,777	1/1:0,22:22:66.17:841,66,0	0/0:25,0:25:69.12:0,69,772	0/0:29,0:29:84.23:0,84,996	0/0:15,0:15:45.09:0,45,519	0/0:19,0:19:54.15:0,54,653	0/0:26,0:26:75.17:0,75,893	0/0:28,0:28:72.20:0,72,855	0/0:33,0:33:93.20:0,93,1071	0/0:29,0:29:81.19:0,81,940	0/0:23,0:22:69.16:0,69,793	0/0:24,0:24:72.16:0,72,837	1/1:1,13:14:39.08:490,39,0	1/1:1,25:27:75.20:1022,75,0	1/1:1,63:63:99:2097,151,0	0/0:20,0:20:46.16:0,46,651	0/0:13,0:13:36.11:0,36,444	0/0:22,0:22:66.10:0,66,737	0/0:25,0:25:72.19:0,72,837	0/0:32,0:32:96.27:0,96,1146	0/0:30,0:29:87.24:0,87,1036	0/0:19,0:19:54.15:0,54,653
chr10	12849847	.	A	ATC	967.93	PASS	AB=0.973;AC=20;AF=0.400;AN=50;BaseQRankSum=-1.447;DP=652;FS=1.470;HRun=0;HaplotypeScore=106.6541;InbreedingCoeff=0.0205;MQ=56.50;MQ0=13;MQRankSum=1.545;QD=2.57;ReadPosRankSum=-1.271;VQSLOD=2.0600;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:32:3:0,3,32	0/0:7,0:7:2.67:0,3,14	./.	0/1:32,0:20:0:0,0,0	0/1:29,0:29:31.42:31,0,50	./.	1/1:24,0:22:8.96:69,9,0	1/1:24,0:22:1.25:3,1,0	0/0:29,0:29:11.98:0,12,115	1/1:23,0:23:23.39:198,23,0	0/1:21,0:21:9.68:38,0,10	0/0:22,1:24:2.74:0,3,12	0/1:13,1:13:8.89:120,0,9	0/1:18,2:21:49.40:114,0,49	0/1:34,2:32:23.44:29,0,23	1/1:18,3:20:5.23:52,5,0	0/1:25,2:27:72.60:73,0,85	0/0:17,1:15:6.25:0,6,34	./.	0/0:16,0:16:2.90:0,3,16	0/0:30,0:27:8.68:0,9,46	0/0:27,0:25:17.08:0,17,116	0/1:29,0:29:6.13:72,0,6	1/1:21,3:20:11.48:146,11,0	0/0:15,0:15:3.01:0,3,32	0/1:28,0:28:17.17:76,0,17	0/1:21,0:20:37.86:93,0,38	0/0:11,0:9:2.68:0,3,11
chr10	12849895	.	CAT	C	539.69	PASS	AB=0.991;AC=22;AF=0.423;AN=52;BaseQRankSum=0.393;DP=470;FS=51.217;HRun=0;HaplotypeScore=127.8344;InbreedingCoeff=-0.4193;MQ=35.59;MQ0=31;MQRankSum=4.877;QD=1.46;ReadPosRankSum=-0.453;VQSLOD=0.2828;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:31:26.65:0,27,279	0/1:4,0:4:16.64:17,0,17	./.	./.	0/1:23,0:22:33.23:33,0,51	0/0:15,0:13:2.22:0,2,7	0/1:19,0:18:8.59:12,0,9	0/0:15,0:4:8.94:0,9,108	0/1:14,0:12:10.80:11,0,51	0/1:15,0:13:57.27:57,0,236	0/1:22,0:21:0.32:20,0,0	0/1:24,0:20:16.07:16,0,35	0/1:19,0:19:45.29:45,0,146	0/1:19,0:18:7.76:8,0,93	0/1:30,1:26:20.38:20,0,87	0/1:19,0:19:22.23:22,0,87	0/1:24,0:22:64.78:65,0,267	0/1:15,0:12:0.67:1,0,220	0/0:4,0:2:3.48:0,3,50	0/0:15,0:13:10.09:0,10,87	1/1:21,0:17:2.56:74,3,0	0/1:19,0:18:45.68:46,0,46	1/1:18,0:18:6:66,6,0	0/1:22,0:18:48.78:50,0,49	0/0:13,4:12:8.96:0,9,120	0/1:17,0:15:34.97:35,0,285	0/1:13,0:11:58.08:58,0,117	0/1:9,0:8:28.22:28,0,49
chr10	12849898	.	GCACACACACACACACACA	G	4720.09	PASS	AB=0.775;AC=31;AF=0.620;AN=50;BaseQRankSum=3.676;DP=462;FS=1.015;HRun=0;HaplotypeScore=169.3663;InbreedingCoeff=0.4580;MQ=35.86;MQ0=31;MQRankSum=-5.419;QD=15.32;ReadPosRankSum=2.258;VQSLOD=3.7210;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:33:30.99:0,31,2440	1/1:3,1:4:4.26:150,4,0	./.	./.	0/0:12,9:21:1.10:0,1,3	1/1:11,2:13:3.01:86,3,0	1/1:15,1:17:0.10:0,0,0	0/0:13,0:3:6.02:0,6,451	1/1:12,2:12:2.03:145,2,0	1/1:11,1:10:8.99:216,9,0	0/1:15,3:18:0:0,0,0	1/1:15,8:20:9.03:440,9,0	1/1:14,4:18:12.90:710,13,0	./.	0/1:22,7:25:15.25:391,0,15	1/1:13,7:19:15.05:643,15,0	0/1:22,2:21:24.15:429,0,24	1/1:12,3:12:9.03:440,9,0	0/0:3,0:2:3.01:0,3,211	0/0:9,0:15:9.83:0,10,373	0/0:21,0:17:18.47:0,18,1013	0/1:10,8:17:0:0,0,0	0/1:8,10:18:0:0,0,0	1/1:18,3:17:3.04:25,3,0	0/0:19,0:15:18.06:0,18,1436	1/1:12,5:15:15.02:732,15,0	1/1:11,0:10:3.42:21,3,0	1/1:5,3:8:6.02:291,6,0
chr10	12849982	.	AATGG	A	11036.48	PASS	AB=0.605;AC=39;AF=0.696;AN=56;BaseQRankSum=1.666;DP=658;FS=0.570;HRun=0;HaplotypeScore=168.1233;InbreedingCoeff=0.8566;MQ=65.21;MQ0=3;MQRankSum=5.553;QD=23.04;ReadPosRankSum=2.686;VQSLOD=4.3729;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:48.12:0,48,1053	1/1:3,4:7:12.04:189,12,0	0/0:22,0:20:7.74:0,8,114	0/0:18,0:14:7.27:0,7,135	1/1:11,7:18:18.06:283,18,0	1/1:6,14:20:33.11:518,33,0	1/1:20,10:30:15.05:236,15,0	0/0:32,0:32:22.32:0,22,384	1/1:14,25:39:72.25:1131,72,0	1/1:13,16:28:48.16:754,48,0	1/1:12,5:17:24.08:375,24,0	1/1:14,19:33:51.17:801,51,0	1/1:7,12:19:24.08:377,24,0	1/1:11,16:26:45.15:707,45,0	1/1:6,33:39:84.29:1320,84,0	1/1:10,19:29:51.17:801,51,0	0/1:8,15:22:0.92:480,0,1	1/1:8,12:19:30.10:471,30,0	0/0:12,0:11:7.27:0,7,121	0/0:24,0:24:2.92:0,3,59	0/0:20,0:19:9.89:0,10,118	1/1:14,10:24:39.09:565,39,0	1/1:14,5:19:15.05:236,15,0	1/1:13,20:32:39.13:613,39,0	0/0:18,0:17:39.13:0,39,923	1/1:18,10:28:36.12:566,36,0	1/1:6,12:19:24.08:377,24,0	1/1:1,5:6:15.05:236,15,0
chr10	12850049	.	A	AGATG	2353.01	PASS	AB=0.565;AC=7;AF=0.125;AN=56;BaseQRankSum=-0.334;DP=835;FS=1.142;HRun=0;HaplotypeScore=186.2864;InbreedingCoeff=0.8782;MQ=57.24;MQ0=9;MQRankSum=-5.514;QD=19.45;ReadPosRankSum=-5.823;VQSLOD=2.4777;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:31:65:0,65,1010	0/0:12,0:12:36.10:0,36,566	0/0:42,0:22:47.44:0,47,629	0/0:43,0:26:17.28:0,17,540	0/0:14,0:14:36.12:0,36,616	0/0:21,0:21:36.09:0,36,545	0/0:32,0:31:72.22:0,72,1214	1/1:8,27:34:87.04:1381,87,0	0/0:42,0:42:99:0,102,1572	0/0:27,0:27:75.23:0,75,1182	0/0:14,0:14:36.12:0,36,592	0/0:40,0:40:89.84:0,90,1367	0/0:31,0:31:72.16:0,72,1163	0/0:35,0:35:87.27:0,87,1417	0/0:60,0:60:99:0,141,2236	0/0:40,0:40:96.28:0,96,1542	0/0:26,0:26:53.02:0,53,873	0/0:28,0:28:69.21:0,69,1105	1/1:4,11:14:39.07:688,39,0	1/1:8,19:27:21.03:417,21,0	0/1:9,30:39:4.23:14,0,4	0/0:25,0:25:66.23:0,66,1131	0/0:17,0:17:45.12:0,45,677	0/0:56,0:55:99:0,108,1758	0/0:29,0:29:81.24:0,81,1319	0/0:20,0:20:48.16:0,48,829	0/0:20,0:20:42.14:0,42,707	0/0:8,0:8:14.08:0,14,189
chr10	12852766	.	C	CA	419.11	PASS	AB=0.901;AC=12;AF=0.214;AN=56;BaseQRankSum=2.948;DP=542;FS=0.000;HRun=14;HaplotypeScore=105.9061;InbreedingCoeff=0.3547;MQ=57.71;MQ0=3;MQRankSum=-4.567;QD=2.56;ReadPosRankSum=-1.784;VQSLOD=0.1161;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,1:36:40.01:0,40,359	0/0:5,0:7:12.92:0,13,69	0/1:21,0:13:0:0,0,0	0/0:12,0:10:5.42:0,5,29	0/0:30,0:32:36.15:0,36,293	0/0:13,0:13:20.58:0,21,134	0/0:16,2:18:6.03:0,6,166	0/1:15,5:20:1.26:110,0,1	0/0:18,0:19:2.97:0,3,85	0/1:28,1:33:0.47:0,0,221	0/0:17,0:20:35.77:0,36,208	0/0:16,0:16:5.55:0,6,38	0/0:21,0:21:20.17:0,20,129	0/0:16,0:16:13.26:0,13,93	0/1:18,0:18:6.27:6,0,78	0/0:24,1:25:1.87:0,2,133	0/0:27,0:26:15.32:0,15,205	0/0:19,0:21:28.35:0,28,177	1/1:11,2:11:3.88:120,4,0	1/1:12,4:16:7.35:158,7,0	1/1:6,3:9:14.85:117,15,0	0/0:13,0:14:7.38:0,7,36	0/0:17,0:17:24.99:0,25,169	0/0:22,0:21:8.75:0,9,156	0/0:14,0:14:26.44:0,26,173	0/0:25,0:26:27.78:0,28,166	0/1:19,5:23:11.80:12,0,62	0/1:8,2:10:34.96:35,0,57
chr10	12852801	.	AAAAAC	A	1693.30	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-0.155;DP=546;FS=1.217;HRun=0;HaplotypeScore=116.1286;InbreedingCoeff=0.9463;MQ=53.69;MQ0=18;MQRankSum=-2.826;QD=25.27;ReadPosRankSum=-3.292;VQSLOD=3.0402;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:63.66:0,64,1620	0/0:3,0:3:9.02:0,9,183	0/0:28,0:5:5.96:0,6,46	0/0:31,0:10:23.08:0,23,164	0/0:27,0:25:72.21:0,72,1519	0/0:14,0:13:27.08:0,27,680	0/0:23,0:23:60.04:0,60,1141	1/1:5,11:14:36.09:513,36,0	0/0:16,0:16:42.06:0,42,979	0/0:34,0:32:89.04:0,89,1788	0/0:16,0:16:36:0,36,672	0/0:19,0:19:54.50:0,55,1100	0/0:17,0:17:44.94:0,45,843	0/0:17,0:18:43.70:0,44,640	0/0:27,0:27:75.09:0,75,1596	0/0:22,0:21:57.15:0,57,1280	0/0:28,0:27:66.16:0,66,1434	0/0:18,0:18:45.02:0,45,962	1/1:12,1:8:21.05:289,21,0	1/1:6,20:25:62.98:908,63,0	1/1:2,10:12:15.35:142,15,0	0/0:11,0:11:32.95:0,33,631	0/0:9,0:8:17.56:0,18,362	0/0:21,0:21:54.13:0,54,1249	0/0:15,0:14:33.09:0,33,873	0/0:22,0:21:58.41:0,58,1313	0/0:23,0:22:51.08:0,51,1006	0/0:8,0:8:24.07:0,24,541
chr10	12853036	.	TA	T	4379.92	PASS	AC=46;AF=0.852;AN=54;BaseQRankSum=2.687;DP=401;FS=3.797;HRun=12;HaplotypeScore=45.5693;InbreedingCoeff=0.8078;MQ=56.12;MQ0=12;MQRankSum=1.152;QD=13.44;ReadPosRankSum=2.972;VQSLOD=4.9890;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:29.97:0,30,276	1/1:1,5:6:8.95:70,9,0	0/0:17,0:5:5.12:0,5,61	0/0:17,0:8:7.45:0,7,68	1/1:2,13:15:35.84:279,36,0	1/1:1,8:8:14.94:116,15,0	1/1:1,6:6:17.93:139,18,0	1/1:9,12:19:5.08:219,5,0	1/1:2,12:14:23.90:186,24,0	1/1:1,17:17:44.79:348,45,0	1/1:1,8:9:17.93:139,18,0	1/1:8,10:16:23.83:180,24,0	1/1:7,11:19:34.79:253,35,0	1/1:4,10:14:20.91:162,21,0	1/1:3,15:18:29.79:232,30,0	1/1:3,8:10:17.62:139,18,0	1/1:5,20:23:41.81:325,42,0	1/1:6,14:19:36.63:268,37,0	1/1:6,9:12:23.89:186,24,0	./.	1/1:2,5:7:16.03:105,16,0	1/1:1,1:2:2.98:23,3,0	1/1:2,3:5:8.88:70,9,0	1/1:3,9:11:17.85:139,18,0	0/0:18,0:16:29.20:0,29,356	1/1:5,22:26:29.23:408,29,0	1/1:5,15:19:38.84:302,39,0	1/1:6,5:10:11.91:93,12,0
chr10	12853671	.	TCATTCA	T	996.85	PASS	AB=0.968;AC=15;AF=0.268;AN=56;BaseQRankSum=9.404;DP=578;FS=48.054;HRun=0;HaplotypeScore=175.8134;InbreedingCoeff=-0.2254;MQ=61.30;MQ0=10;MQRankSum=-8.529;QD=3.08;ReadPosRankSum=-2.140;VQSLOD=0.9326;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:77.13:0,77,1772	0/0:9,0:9:7.84:0,8,312	0/0:29,0:21:57.08:0,57,975	0/1:30,0:18:25.20:25,0,478	0/0:10,0:10:23.96:0,24,399	0/1:21,0:21:5.67:6,0,582	0/0:31,0:31:76.34:0,76,938	0/0:24,0:23:66.22:0,66,1046	0/1:22,2:24:99:210,0,298	0/0:24,0:23:67.26:0,67,1129	0/0:5,0:5:14.88:0,15,186	0/1:29,1:30:99:123,0,812	0/1:18,0:19:99:109,0,411	0/1:31,1:32:99:139,0,649	0/1:26,1:27:99:167,0,745	0/1:25,0:26:69.33:69,0,683	0/1:24,0:24:80.81:81,0,588	0/1:16,1:17:70.19:70,0,452	0/0:13,0:12:8.28:0,8,447	0/0:7,0:7:11.37:0,11,222	0/0:41,0:41:96.79:0,97,1403	0/0:8,0:8:14.98:0,15,228	0/0:10,0:10:27.05:0,27,376	0/1:41,0:39:2.29:2,0,574	0/0:9,0:9:27.09:0,27,597	0/1:16,0:16:71.46:71,0,305	0/1:12,1:13:55.97:56,0,347	1/1:3,0:3:2.98:21,3,0
chr10	12853675	.	TCACACA	T	4653.16	PASS	AB=0.847;AC=41;AF=0.820;AN=50;BaseQRankSum=3.630;DP=577;FS=5.675;HRun=0;HaplotypeScore=167.1550;InbreedingCoeff=0.2742;MQ=58.17;MQ0=13;MQRankSum=-4.991;QD=10.05;ReadPosRankSum=-2.505;VQSLOD=3.4375;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:36:41.41:0,41,1083	1/1:7,2:9:3.01:56,3,0	./.	./.	./.	0/1:15,2:21:12.61:67,0,13	0/1:22,0:30:35.31:35,0,134	0/1:24,0:23:0.03:0,0,0	1/1:14,9:24:42.10:748,42,0	1/1:24,1:24:3:40,3,0	1/1:4,1:5:3.01:39,3,0	1/1:23,7:30:21.07:395,21,0	1/1:17,3:20:29.96:423,30,0	1/1:21,8:30:33:515,33,0	1/1:22,5:28:25.74:471,26,0	1/1:19,6:25:11.70:433,12,0	1/1:17,5:23:18.03:314,18,0	1/1:18,0:18:3.09:235,3,0	1/1:11,0:10:6.02:84,6,0	1/1:7,0:7:3.01:42,3,0	1/1:41,0:42:0.19:0,0,0	1/1:3,5:8:2.96:20,3,0	0/1:9,0:10:0:0,0,0	1/1:31,9:40:6.64:104,7,0	0/0:7,0:9:15.05:0,15,343	0/1:10,4:14:22.80:387,0,23	1/1:9,3:12:9.03:183,9,0	1/1:0,3:3:3.01:61,3,0
chr10	12853709	.	ACACACAC	A	346.25	PASS	AB=0.959;AC=14;AF=0.250;AN=56;BaseQRankSum=10.427;DP=703;FS=2.722;HRun=0;HaplotypeScore=226.1320;InbreedingCoeff=-0.2208;MQ=47.48;MQ0=25;MQRankSum=-7.837;QD=1.07;ReadPosRankSum=8.671;VQSLOD=2.0112;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:39:56.04:0,56,2189	0/0:7,0:7:5.98:0,6,107	0/0:43,0:3:8.89:0,9,91	0/0:55,0:4:8.61:0,9,104	0/0:5,0:5:5.87:0,6,62	0/0:19,0:18:22.39:0,22,418	0/0:36,0:36:84.69:0,85,1152	0/1:32,0:28:18.29:18,0,211	0/1:37,0:37:96.51:97,0,347	0/0:22,0:19:16.05:0,16,476	0/0:7,0:7:8.50:0,8,72	0/1:30,0:30:34.43:34,0,239	0/1:24,0:25:33.96:34,0,486	0/1:31,0:31:57.57:58,0,411	0/1:33,0:33:72.73:73,0,535	0/1:28,0:28:9.18:9,0,435	0/0:33,0:33:4.11:0,4,528	0/0:26,0:26:32.85:0,33,625	0/1:9,2:10:80.77:81,0,87	0/1:4,4:8:8.99:47,0,9	0/0:56,2:57:50.98:0,51,391	0/0:9,0:9:8.89:0,9,108	0/0:9,0:8:2.75:0,3,41	0/1:48,0:45:14.95:15,0,348	0/0:9,0:9:18.06:0,18,566	0/1:23,0:23:10.40:10,0,556	0/1:16,0:16:4.62:5,0,326	1/1:3,0:3:2.80:13,3,0
chr10	12853777	.	CCA	C	14797.95	PASS	AB=0.944;AC=43;AF=0.768;AN=56;BaseQRankSum=-6.302;DP=876;FS=41.252;HRun=0;HaplotypeScore=158.3348;InbreedingCoeff=0.7415;MQ=57.82;MQ0=8;MQRankSum=0.814;QD=22.39;ReadPosRankSum=2.326;VQSLOD=3.1066;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:39,3:42:17.13:17,0,1218	1/1:2,10:12:24.08:293,24,0	0/0:41,0:15:9.03:0,9,122	0/1:31,0:21:1.47:1,0,166	1/1:0,15:15:42.13:513,42,0	1/1:5,12:17:30.40:345,30,0	1/1:6,19:26:41.78:468,42,0	0/0:14,0:28:54.01:0,54,514	1/1:8,24:32:60.19:733,60,0	1/1:4,33:37:93.29:1137,93,0	1/1:2,12:14:30.09:367,30,0	1/1:7,31:40:81.99:1032,82,0	1/1:3,27:32:83.93:980,84,0	1/1:6,29:35:66.20:803,66,0	1/1:8,29:37:81.25:990,81,0	1/1:4,22:26:57.18:697,57,0	1/1:9,30:39:81.25:990,81,0	1/1:9,39:48:97.54:1174,98,0	0/0:9,0:14:30.03:0,30,321	0/0:3,0:17:38.62:0,39,341	0/0:27,1:113:99:0,179,1999	1/1:3,19:22:54.17:659,54,0	1/1:0,13:13:30.09:367,30,0	1/1:11,52:64:99:1345,114,0	0/1:8,1:9:12.59:13,0,317	1/1:6,25:29:66.13:775,66,0	1/1:5,21:26:57.18:697,57,0	1/1:1,10:11:33.10:402,33,0
chr10	12855393	.	C	CA	4366.28	PASS	AB=0.652;AC=33;AF=0.589;AN=56;BaseQRankSum=-7.283;DP=556;FS=8.430;HRun=14;HaplotypeScore=72.6219;InbreedingCoeff=0.3333;MQ=68.36;MQ0=1;MQRankSum=0.897;QD=10.86;ReadPosRankSum=-0.846;VQSLOD=3.8345;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:44:74.65:0,75,566	1/1:5,7:12:4.73:165,5,0	0/0:13,0:8:5.69:0,6,32	0/1:7,1:9:10.13:10,0,36	1/1:7,15:23:31.13:339,31,0	1/1:7,14:22:16.58:259,17,0	0/1:7,6:14:34.87:50,0,35	0/0:10,0:21:16.02:0,16,46	0/1:2,8:10:1.27:114,0,1	1/1:9,15:24:25.44:310,25,0	1/1:4,15:20:23.70:304,24,0	1/1:2,20:23:19.49:276,19,0	0/1:8,7:14:8.54:44,0,9	0/1:6,13:20:10.45:125,0,10	0/1:6,7:14:30.85:124,0,31	1/1:4,21:26:28.79:271,29,0	0/1:7,20:27:11.54:269,0,12	1/1:7,14:25:6.10:237,6,0	0/0:5,0:12:13.42:0,13,38	0/0:2,0:20:33.81:0,34,96	0/0:5,0:21:24.40:0,24,70	1/1:4,13:17:13.68:237,14,0	1/1:3,16:19:13.72:244,14,0	1/1:2,17:19:13.84:335,14,0	0/0:18,1:21:13.96:0,14,209	0/1:9,12:24:9.49:269,0,9	0/1:11,8:19:10.73:73,0,11	1/1:3,14:18:22.56:311,23,0
chr10	12857029	.	G	GGT	1855.80	PASS	AB=0.892;AC=34;AF=0.708;AN=48;BaseQRankSum=-0.289;DP=445;FS=10.782;HRun=0;HaplotypeScore=74.5765;InbreedingCoeff=0.0426;MQ=57.43;MQ0=25;MQRankSum=0.346;QD=5.57;ReadPosRankSum=1.665;VQSLOD=1.6103;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:19,1:18:20.66:21,0,144	1/1:4,4:8:3.01:45,3,0	./.	./.	0/1:21,1:22:23.49:64,0,23	0/0:14,0:14:9.02:0,9,97	0/0:16,0:20:29.57:0,30,263	1/1:14,0:13:3.01:39,3,0	0/1:19,4:20:99:186,0,99	1/1:14,0:14:3.01:45,3,0	./.	1/1:16,3:17:12.04:178,12,0	1/1:12,0:12:11.97:134,12,0	1/1:9,0:12:6.01:59,6,0	0/1:14,2:14:40.57:111,0,41	1/1:12,4:16:8.95:121,9,0	0/1:15,1:14:57.49:57,0,59	1/1:14,4:13:8.75:132,9,0	./.	1/1:7,0:11:9.02:97,9,0	0/1:18,2:21:7.16:136,0,7	1/1:14,0:14:9.02:102,9,0	1/1:8,0:10:11.85:98,12,0	0/1:18,2:17:20.48:108,0,20	0/0:16,0:15:15.04:0,15,162	1/1:17,0:17:3.01:45,3,0	1/1:9,4:12:12.04:175,12,0	0/1:11,3:13:55.50:56,0,68
chr10	12857077	.	GGAGA	G	1059.94	PASS	AB=0.922;AC=28;AF=0.609;AN=46;BaseQRankSum=2.699;DP=441;FS=16.122;HRun=0;HaplotypeScore=79.8438;InbreedingCoeff=0.2949;MQ=40.82;MQ0=63;MQRankSum=-1.140;QD=4.14;ReadPosRankSum=-0.360;VQSLOD=0.2921;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:28:27.58:0,28,468	./.	./.	./.	1/1:13,0:13:3.01:46,3,0	0/1:11,0:12:15.86:16,0,127	0/0:25,0:24:11.51:0,12,197	./.	1/1:16,2:17:2.68:46,3,0	1/1:7,2:8:6.01:74,6,0	./.	1/1:16,1:15:8.99:112,9,0	0/1:17,0:15:4.44:81,0,4	0/0:7,1:6:0:0,0,0	0/1:15,2:14:36.66:55,0,37	0/0:9,0:8:0.45:0,0,1	1/1:13,5:15:8.12:137,8,0	1/1:12,2:9:15.04:213,15,0	0/0:5,0:2:6.02:0,6,96	0/0:7,0:7:3:0,3,25	1/1:22,0:18:2.71:15,3,0	1/1:7,1:8:3.01:46,3,0	0/0:12,0:11:0:0,0,0	1/1:19,2:15:2.65:46,3,0	1/1:15,0:13:2.49:9,2,0	1/1:7,1:8:9.02:104,9,0	1/1:17,4:19:14.33:170,14,0	0/1:18,0:12:0.01:23,0,0
chr10	12857713	.	AAATT	A	1730.90	PASS	AB=1.000;AC=37;AF=0.771;AN=48;BaseQRankSum=6.199;DP=275;FS=0.844;HRun=0;HaplotypeScore=61.4021;InbreedingCoeff=0.5836;MQ=59.29;MQ0=6;MQRankSum=-0.013;QD=9.02;ReadPosRankSum=2.017;VQSLOD=2.2286;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:42.08:0,42,822	./.	0/0:10,0:5:14.97:0,15,124	0/0:8,0:4:5.97:0,6,52	1/1:5,2:7:6.02:93,6,0	1/1:5,0:13:14.89:127,15,0	./.	1/1:26,0:24:2.99:24,3,0	1/1:3,2:5:6.02:93,6,0	0/1:10,0:9:0:0,0,0	1/1:4,4:8:5.99:93,6,0	1/1:7,4:11:3.01:47,3,0	1/1:3,2:5:3.01:47,3,0	1/1:4,4:8:6.02:93,6,0	1/1:9,1:10:9:139,9,0	1/1:12,0:12:2.98:43,3,0	0/0:22,0:22:30.10:0,30,609	1/1:5,12:17:21.02:300,21,0	1/1:12,3:14:9.03:134,9,0	1/1:5,4:9:12.04:186,12,0	1/1:3,1:4:3.01:47,3,0	./.	./.	1/1:7,0:7:3.01:47,3,0	0/0:11,0:11:33.07:0,33,509	1/1:8,1:9:2.96:46,3,0	1/1:6,3:9:9.03:140,9,0	1/1:3,4:6:12.04:186,12,0
chr10	12858082	.	T	TAC	4406.98	PASS	AB=0.529;AC=7;AF=0.125;AN=56;BaseQRankSum=-10.530;DP=823;FS=0.834;HRun=0;HaplotypeScore=99.6860;InbreedingCoeff=0.8752;MQ=65.85;MQ0=4;MQRankSum=1.594;QD=32.64;ReadPosRankSum=-1.181;VQSLOD=6.3732;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,120,1494	0/0:13,0:13:39.11:0,39,486	0/0:54,1:32:23.25:0,23,575	0/0:47,0:28:40.79:0,41,582	0/0:33,0:33:93.29:0,93,1180	0/0:35,0:35:87.26:0,87,1089	0/0:30,0:30:72.20:0,72,895	1/1:6,24:30:72.20:1121,72,0	0/0:25,0:25:66.20:0,66,834	0/0:26,0:26:63.20:0,63,797	0/0:16,0:16:42.09:0,42,521	0/0:30,0:30:84.24:0,84,1050	0/0:21,0:21:51.15:0,51,641	0/0:25,0:25:69.21:0,69,873	0/0:34,0:34:96.31:0,96,1233	0/0:21,0:21:54.16:0,54,681	0/0:52,0:52:99:0,150,1893	0/0:28,0:28:72.15:0,72,886	1/1:8,17:25:49.02:741,49,0	0/1:2,16:18:5.47:473,0,5	1/1:6,53:60:90.84:2072,91,0	0/0:26,0:26:69.22:0,69,885	0/0:16,0:16:48.16:0,48,617	0/0:27,0:27:69.06:0,69,886	0/0:22,0:22:57.19:0,57,733	0/0:26,0:26:75.24:0,75,963	0/0:22,0:21:57.17:0,57,717	0/0:10,0:10:27.07:0,27,333
chr10	12858683	.	TA	T	1527.99	PASS	AB=0.889;AC=9;AF=0.161;AN=56;BaseQRankSum=7.756;DP=335;FS=8.444;HRun=9;HaplotypeScore=42.1205;InbreedingCoeff=0.7844;MQ=55.34;MQ0=6;MQRankSum=-5.235;QD=19.10;ReadPosRankSum=-3.169;VQSLOD=2.1441;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:21:57.17:0,57,658	0/0:5,0:5:12.04:0,12,138	0/0:6,0:6:18.05:0,18,199	0/0:3,0:3:9.02:0,9,90	0/0:12,0:12:33.10:0,33,381	0/0:16,0:15:36.11:0,36,415	0/0:7,0:7:15.04:0,15,172	1/1:7,24:23:68.99:620,69,0	0/0:8,0:6:15.03:0,15,162	0/0:7,0:7:15.04:0,15,173	0/0:16,0:16:48.12:0,48,534	0/0:6,0:6:18.05:0,18,208	0/1:7,1:7:12.59:13,0,109	0/0:9,0:9:27:0,27,294	0/0:8,0:8:21.06:0,21,242	0/0:5,0:5:15.04:0,15,173	0/0:28,0:28:57.09:0,57,629	0/0:21,0:21:60.12:0,60,666	1/1:1,24:24:71.99:644,72,0	1/1:0,4:4:12.01:110,12,0	1/1:0,12:12:33.02:302,33,0	0/0:2,0:2:3.01:0,3,35	0/0:6,0:5:15.03:0,15,163	0/0:8,0:8:21.06:0,21,242	0/0:10,0:10:27.08:0,27,312	0/0:16,0:15:45.10:0,45,505	0/0:15,0:14:42.06:0,42,468	0/0:18,0:18:51.15:0,51,588
chr10	12858786	.	GA	G	1598.99	PASS	AC=8;AF=0.160;AN=50;BaseQRankSum=4.831;DP=341;FS=28.277;HRun=1;HaplotypeScore=29.4317;InbreedingCoeff=0.7726;MQ=33.47;MQ0=52;MQRankSum=-0.525;QD=24.23;ReadPosRankSum=-0.510;VQSLOD=1.6679;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:13:24.06:0,24,358	0/0:3,0:3:9.03:0,9,144	./.	./.	0/0:19,0:19:36.12:0,36,571	0/0:23,0:12:27.09:0,27,419	0/0:13,0:5:12.04:0,12,191	1/1:1,32:16:45.13:609,45,0	0/0:10,0:6:6.02:0,6,96	0/0:12,0:7:21.04:0,21,309	0/0:16,0:14:30.10:0,30,479	0/0:7,0:5:12.04:0,12,181	0/0:8,0:5:5.92:0,6,96	0/0:9,0:3:6.02:0,6,96	0/0:7,0:2:3.01:0,3,48	0/0:9,0:3:9.03:0,9,143	0/0:17,0:14:27.09:0,27,428	0/0:13,0:11:17.69:0,18,264	1/1:1,10:10:30.10:409,30,0	1/1:0,5:5:15.01:188,15,0	1/1:0,17:14:39.13:545,39,0	./.	0/0:7,0:6:6.02:0,6,95	0/0:8,0:6:9.03:0,9,142	0/0:8,0:7:21.02:0,21,285	0/0:21,0:15:42.14:0,42,671	0/0:18,0:5:9.03:0,9,143	0/0:9,0:9:21.07:0,21,335
chr10	12858845	.	T	TA	545.77	PASS	AB=1.000;AC=7;AF=0.146;AN=48;BaseQRankSum=3.325;DP=329;FS=20.195;HRun=2;HaplotypeScore=33.7604;InbreedingCoeff=0.5641;MQ=35.19;MQ0=54;MQRankSum=-4.198;QD=11.14;ReadPosRankSum=-2.693;VQSLOD=-0.3479;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:9:21.07:0,21,254	0/0:2,0:2:6.02:0,6,71	./.	./.	0/0:16,0:13:9.03:0,9,111	0/0:14,0:9:24.01:0,24,269	0/0:10,0:3:6.02:0,6,73	1/1:4,9:9:23.92:243,24,0	0/0:11,0:8:4.95:0,5,82	0/0:18,0:14:26.79:0,27,242	0/0:10,0:9:14.96:0,15,149	0/0:11,0:9:14.95:0,15,145	0/0:11,0:10:17.56:0,18,197	0/0:10,0:8:8.85:0,9,71	0/0:14,0:12:3.26:0,3,229	0/1:11,0:7:13.44:13,0,163	0/0:15,0:10:17.94:0,18,178	0/0:18,0:13:23.71:0,24,288	1/1:14,5:19:36.39:349,36,0	1/1:0,2:2:6.02:74,6,0	./.	./.	0/0:7,0:6:9:0,9,94	0/0:11,0:6:0.87:0,1,66	0/0:11,0:9:18.06:0,18,218	0/0:16,0:12:29.98:0,30,288	0/0:8,0:8:12.04:0,12,146	0/0:12,0:10:26.57:0,27,263
chr10	12858985	.	G	GT	1075.71	PASS	AC=8;AF=0.148;AN=54;BaseQRankSum=3.524;DP=549;FS=2.721;HRun=1;HaplotypeScore=96.0562;InbreedingCoeff=0.9308;MQ=41.06;MQ0=94;MQRankSum=-3.694;QD=17.07;ReadPosRankSum=-1.212;VQSLOD=3.5824;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:37:87.28:0,87,1128	0/0:7,0:7:18.06:0,18,234	./.	0/0:2,0:2:3.01:0,3,39	0/0:18,0:17:45.15:0,45,584	0/0:21,0:16:39.13:0,39,506	0/0:17,0:11:27.09:0,27,350	1/1:10,5:9:20.99:247,21,0	0/0:30,0:27:63.20:0,63,817	0/0:18,0:13:39.13:0,39,506	0/0:13,0:11:33.11:0,33,428	0/0:15,0:13:27.09:0,27,350	0/0:16,0:16:36.12:0,36,467	0/0:22,0:20:45.15:0,45,583	0/0:27,0:23:63.19:0,63,803	0/0:27,0:20:57.19:0,57,739	0/0:33,0:21:54.16:0,54,686	0/0:36,0:21:51.17:0,51,662	1/1:5,7:11:29.94:328,30,0	1/1:3,8:10:21.07:292,21,0	1/1:16,9:11:27.09:366,27,0	0/0:14,0:11:30.10:0,30,389	0/0:9,0:7:21.07:0,21,272	0/0:39,0:28:75.24:0,75,973	0/0:7,0:6:9.03:0,9,117	0/0:25,0:20:57.19:0,57,740	0/0:21,0:14:39.13:0,39,505	0/0:17,0:12:30.10:0,30,389
chr10	12859730	.	GAAC	G	2948.04	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=11.312;DP=731;FS=7.556;HRun=0;HaplotypeScore=98.5961;InbreedingCoeff=0.9501;MQ=74.21;MQ0=1;MQRankSum=-1.127;QD=25.64;ReadPosRankSum=-1.486;VQSLOD=3.0036;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,105,2017	0/0:6,0:6:18.06:0,18,370	0/0:24,0:23:2.91:0,3,680	0/0:27,0:27:42.14:0,42,766	0/0:30,0:30:75.24:0,75,1472	0/0:18,0:18:42.14:0,42,864	0/0:31,1:32:40.62:0,41,1576	1/1:8,22:31:66.14:862,66,0	0/0:24,0:24:57.18:0,57,1108	0/0:26,0:26:69.23:0,69,1368	0/0:26,0:26:60.21:0,60,1216	0/0:24,0:24:66.23:0,66,1345	0/0:20,0:20:51.17:0,51,1024	0/0:30,0:30:78.20:0,78,1378	0/0:23,0:23:54.17:0,54,1074	0/0:29,0:29:72.24:0,72,1445	0/0:27,0:27:75.26:0,75,1525	0/0:17,0:17:42.14:0,42,839	1/1:12,11:23:33.10:464,33,0	1/1:6,21:27:54.18:778,54,0	1/1:3,31:34:69.23:1004,69,0	0/0:26,0:26:69.21:0,69,1336	0/0:33,0:33:87.30:0,87,1779	0/0:26,0:26:66.21:0,66,1306	0/0:23,0:23:60.20:0,60,1190	0/0:30,0:30:63.20:0,63,1240	0/0:40,0:40:99:0,102,1979	0/0:15,0:15:45.14:0,45,888
chr10	12860039	.	TACCCCATTTTA	T	1474.29	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=6.827;DP=485;FS=7.799;HRun=0;HaplotypeScore=153.7497;InbreedingCoeff=0.8959;MQ=91.81;MQ0=0;MQRankSum=-3.049;QD=30.71;ReadPosRankSum=-1.966;VQSLOD=2.5511;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,102,5309	0/0:2,0:2:6.02:0,6,277	0/0:21,0:20:45.15:0,45,1610	0/0:25,0:25:42.14:0,42,1881	0/0:16,0:16:36.11:0,36,1677	0/0:26,0:26:63.22:0,63,3217	0/0:14,0:14:30.10:0,30,1652	1/1:12,8:20:24.08:621,24,0	0/0:15,0:15:33.11:0,33,1774	0/0:17,0:17:45.15:0,45,2285	0/0:17,0:17:39.13:0,39,2146	0/0:15,0:15:39.13:0,39,2012	0/0:13,0:13:36.12:0,36,1897	0/0:7,0:7:18.06:0,18,983	0/0:17,0:17:51.16:0,51,2579	0/0:22,0:22:48.16:0,48,2641	0/0:30,0:30:81.28:0,81,4258	0/0:14,0:14:42.14:0,42,2054	1/1:9,4:13:12.04:342,12,0	1/1:5,10:15:21.07:649,21,0	0/0:5,3:8:2.49:0,2,6	0/0:15,0:15:30.10:0,30,1579	0/0:17,0:17:42.14:0,42,2050	0/0:20,0:20:45.15:0,45,2248	0/0:18,0:18:39.13:0,39,2077	0/0:17,0:17:42.14:0,42,2222	0/0:21,0:21:45.15:0,45,2352	0/0:13,0:13:18.06:0,18,985
chr10	12860926	.	T	TA	11709.49	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-9.908;DP=573;FS=0.000;HRun=9;HaplotypeScore=57.1502;InbreedingCoeff=0.9660;MQ=75.87;MQ0=0;MQRankSum=-2.023;QD=24.39;ReadPosRankSum=1.422;VQSLOD=5.5547;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,117,1012	1/1:1,6:7:18.05:199,18,0	0/0:18,0:19:27.46:0,27,219	0/0:9,0:9:11.97:0,12,101	1/1:2,23:25:63.06:666,63,0	1/1:5,18:23:48.13:531,48,0	1/1:3,17:21:44.74:479,45,0	1/1:4,15:20:41.16:482,41,0	1/1:4,19:23:48.13:531,48,0	1/1:3,22:26:68.94:713,69,0	1/1:4,18:23:30.99:528,31,0	1/1:3,17:20:39.11:431,39,0	1/1:8,13:21:39.10:426,39,0	1/1:0,17:17:48.13:531,48,0	1/1:3,24:27:45.74:616,46,0	1/1:2,17:20:50.97:545,51,0	1/1:6,14:20:13.39:370,13,0	1/1:1,15:16:39.10:431,39,0	1/1:6,12:18:38.83:389,39,0	1/1:2,23:25:63.02:655,63,0	1/1:1,13:14:30.08:332,30,0	1/1:0,11:12:35.78:348,36,0	1/1:2,21:23:54.15:597,54,0	1/1:5,21:26:57.15:630,57,0	0/0:24,0:24:68.94:0,69,588	1/1:3,19:21:29.34:541,29,0	1/1:2,21:23:37.12:638,37,0	1/1:0,7:7:9.02:100,9,0
chr10	12861786	.	GA	G	673.39	PASS	AB=0.952;AC=6;AF=0.107;AN=56;BaseQRankSum=0.749;DP=642;FS=2.749;HRun=11;HaplotypeScore=144.0503;InbreedingCoeff=0.5848;MQ=60.12;MQ0=0;MQRankSum=-1.755;QD=7.48;ReadPosRankSum=-0.242;VQSLOD=1.4360;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:35:86.55:0,87,856	0/0:9,0:9:27.04:0,27,272	0/1:23,1:17:10.67:11,0,198	0/1:16,0:10:21.39:21,0,39	0/0:26,2:29:26.33:0,26,461	1/1:6,23:29:37.16:518,37,0	1/1:5,12:20:8.11:252,8,0	0/0:17,0:17:33.01:0,33,330	0/0:25,1:26:35.47:0,35,566	0/0:23,0:22:51.06:0,51,504	0/0:24,1:25:54.07:0,54,547	0/0:22,1:24:29.27:0,29,470	0/0:13,0:13:30.07:0,30,317	0/0:25,0:25:60.06:0,60,616	0/0:29,1:30:56.37:0,56,734	0/0:21,1:23:32.79:0,33,517	0/0:25,0:24:54.13:0,54,565	0/0:23,1:24:18.67:0,19,401	0/0:16,0:16:39.09:0,39,405	0/0:20,1:21:17.24:0,17,332	0/0:27,0:27:42.10:0,42,440	0/0:18,0:18:45.03:0,45,447	0/0:22,0:22:45.02:0,45,437	0/0:28,0:28:24.02:0,24,243	0/0:30,0:30:75.14:0,75,771	0/0:30,1:31:50.43:0,50,704	0/0:23,0:23:65.93:0,66,650	0/0:6,0:6:9.02:0,9,91
chr10	12861802	.	AAAGG	A	8989	PASS	AB=0.988;AC=33;AF=0.589;AN=56;BaseQRankSum=-3.359;DP=685;FS=10.133;HRun=0;HaplotypeScore=188.2878;InbreedingCoeff=-0.1376;MQ=50.58;MQ0=4;MQRankSum=1.015;QD=15.53;ReadPosRankSum=7.327;VQSLOD=3.0161;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:78.26:0,78,1406	0/1:9,0:9:27.45:27,0,43	0/0:22,0:11:6.02:0,6,104	0/0:16,0:8:6.48:0,6,84	0/1:23,3:26:14.04:517,0,14	0/1:29,0:28:30.97:407,0,31	1/1:24,0:23:42.96:521,43,0	1/1:3,12:14:36.10:491,36,0	0/1:25,1:25:27.45:438,0,27	0/1:30,0:29:45.86:445,0,46	0/1:26,0:26:21.31:334,0,21	0/1:34,0:34:99:474,0,172	0/1:13,0:11:60.10:122,0,60	0/1:27,0:26:15.79:444,0,16	0/1:35,0:32:44.17:503,0,44	0/1:30,0:30:3.89:404,0,4	1/1:24,1:24:41.96:569,42,0	1/1:22,0:22:32.03:371,32,0	1/1:13,0:12:20.03:274,20,0	1/1:20,1:22:12.70:370,13,0	1/1:30,0:27:3.98:341,4,0	0/1:20,1:21:0.06:352,0,0	0/1:18,0:18:22.01:259,0,22	1/1:11,19:30:0.27:45,0,0	0/0:30,0:30:69.21:0,69,1317	1/1:35,2:34:24.01:686,24,0	0/1:29,0:27:15.80:516,0,16	0/1:8,0:7:49.02:79,0,49
chr10	12861825	.	G	GGAAAGAAA	5625.83	PASS	AB=0.967;AC=24;AF=0.429;AN=56;BaseQRankSum=-5.652;DP=628;FS=3.562;HRun=0;HaplotypeScore=251.0785;InbreedingCoeff=-0.7880;MQ=42.21;MQ0=8;MQRankSum=-2.211;QD=10.23;ReadPosRankSum=-1.697;VQSLOD=3.2753;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:90.22:0,90,1738	0/1:7,0:7:63.77:64,0,98	0/0:8,0:2:3.01:0,3,50	0/0:8,0:2:2.74:0,3,52	0/1:29,0:29:99:382,0,463	0/1:26,0:25:99:309,0,295	0/1:23,0:22:99:206,0,302	0/1:24,0:15:30.98:31,0,323	0/1:23,0:22:72.49:72,0,463	0/1:25,0:25:99:270,0,361	0/1:19,0:19:99:110,0,430	0/1:35,0:35:99:168,0,403	0/1:9,0:7:49.20:88,0,49	0/1:21,0:20:70.98:71,0,395	0/1:38,0:34:99:239,0,649	0/1:23,0:28:99:1014,0,326	0/1:18,0:18:77.32:77,0,333	0/1:11,8:28:99:331,0,198	0/1:11,0:10:99:230,0,131	0/1:15,0:18:99:457,0,347	0/1:25,0:23:99:385,0,305	0/1:20,0:20:99:157,0,353	0/1:16,0:16:99:114,0,280	0/1:31,0:31:46.27:321,0,46	0/0:25,0:24:66.19:0,66,1426	0/1:38,0:35:99:274,0,761	0/1:23,0:21:99:103,0,346	0/1:11,0:10:69.24:153,0,69
chr10	12862057	.	TAAAA	T	11622.07	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=5.782;DP=490;FS=14.857;HRun=15;HaplotypeScore=85.1328;InbreedingCoeff=0.8902;MQ=54.21;MQ0=6;MQRankSum=-2.482;QD=27.15;ReadPosRankSum=4.795;VQSLOD=2.2576;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:29:54.10:0,54,1010	1/1:4,10:15:23.89:289,24,0	0/0:7,0:3:3.01:0,3,60	0/0:8,0:3:3.01:0,3,67	1/1:4,19:24:38.78:508,39,0	1/1:2,20:22:42.10:572,42,0	1/1:3,14:18:39:531,39,0	1/1:13,10:17:29.98:409,30,0	1/1:2,10:12:24.05:327,24,0	1/1:2,10:15:33.02:398,33,0	1/1:3,14:20:31.11:376,31,0	1/1:1,14:15:33.08:450,33,0	1/1:1,18:19:36.11:491,36,0	1/1:2,10:13:33.08:432,33,0	1/1:3,16:19:39.08:531,39,0	1/1:1,17:18:42.14:573,42,0	1/1:4,21:25:39.08:531,39,0	1/1:1,14:15:33.10:450,33,0	1/1:6,21:26:57.05:756,57,0	1/1:1,13:14:36.07:491,36,0	1/1:1,10:11:19:283,19,0	1/1:3,7:10:20.81:284,21,0	1/1:1,8:12:29.98:357,30,0	1/1:2,10:12:30.08:392,30,0	0/0:16,0:18:48.16:0,48,1027	1/1:3,28:30:81.22:1085,81,0	1/1:3,20:22:51.08:695,51,0	1/1:2,10:13:31.30:412,31,0
chr10	12862369	.	CT	C	15908.03	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=2.097;DP=745;FS=6.610;HRun=8;HaplotypeScore=90.3720;InbreedingCoeff=0.9983;MQ=76.00;MQ0=0;MQRankSum=-6.817;QD=24.44;ReadPosRankSum=1.902;VQSLOD=5.4248;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:96.28:0,96,1148	1/1:4,10:14:30.04:288,30,0	0/0:18,0:18:25.68:0,26,363	0/0:20,1:21:21.83:0,22,478	1/1:3,24:27:63.09:606,63,0	1/1:1,20:21:60.09:579,60,0	1/1:2,28:30:81.13:782,81,0	1/1:3,30:33:87.09:831,87,0	1/1:1,27:28:78.12:753,78,0	1/1:4,20:24:57.08:550,57,0	1/1:1,21:22:51.07:492,51,0	1/1:4,36:40:99:985,102,0	1/1:1,28:29:81.13:781,81,0	1/1:4,21:25:60.09:579,60,0	1/1:1,25:26:60.10:579,60,0	1/1:4,24:28:66.10:637,66,0	1/1:2,41:43:99:1072,111,0	1/1:1,29:30:75.12:724,75,0	1/1:5,18:23:51.05:485,51,0	1/1:1,14:15:36.05:348,36,0	1/1:5,38:43:99:1014,105,0	1/1:0,37:37:96.14:927,96,0	1/1:2,17:19:51.08:492,51,0	1/1:3,30:33:87.13:839,87,0	0/0:21,0:21:45.14:0,45,541	1/1:2,22:24:66.11:637,66,0	1/1:2,25:27:66.10:637,66,0	1/1:0,10:10:30.05:290,30,0
chr10	12862496	.	T	TGAGGACCA	34917.01	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-5.963;DP=439;FS=17.166;HRun=0;HaplotypeScore=96.2373;InbreedingCoeff=0.9849;MQ=75.63;MQ0=0;MQRankSum=-12.742;QD=96.99;ReadPosRankSum=0.530;VQSLOD=4.2474;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,108,2836	1/1:1,8:9:27.09:1179,27,0	0/0:14,0:14:39.13:0,39,1048	0/0:15,0:15:39.13:0,39,1056	1/1:4,5:10:27.09:1115,27,0	1/1:1,10:12:33.11:1445,33,0	1/1:8,13:24:60.20:2403,60,0	1/1:14,9:27:72.23:2746,72,0	1/1:8,4:12:30.06:1102,30,0	1/1:2,7:10:30.10:1252,30,0	1/1:2,6:8:21.07:894,21,0	1/1:5,15:24:57.15:2390,57,0	1/1:8,12:20:51.17:2147,51,0	1/1:5,7:12:33.07:1275,33,0	1/1:4,9:15:39.13:1579,39,0	1/1:7,12:21:42.14:1824,42,0	1/1:5,11:20:39.13:1684,39,0	1/1:7,6:14:36.12:1546,36,0	1/1:6,9:17:47.79:1789,48,0	1/1:3,3:7:18.06:662,18,0	1/1:5,8:15:27.09:1134,27,0	1/1:4,5:11:21.07:852,21,0	1/1:7,5:16:23.95:1034,24,0	1/1:10,9:21:48.03:1829,48,0	0/0:13,0:13:39.13:0,39,1117	1/1:7,5:15:30.04:1036,30,0	1/1:2,9:15:32.99:1466,33,0	1/1:1,3:5:12.04:535,12,0
chr10	12863208	.	GCA	G	3793.65	PASS	AB=0.961;AC=29;AF=0.518;AN=56;BaseQRankSum=6.711;DP=704;FS=4.469;HRun=0;HaplotypeScore=222.0553;InbreedingCoeff=-0.3660;MQ=73.93;MQ0=0;MQRankSum=3.543;QD=6.43;ReadPosRankSum=0.276;VQSLOD=2.6329;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,102,1968	0/1:6,0:6:27.95:35,0,28	0/0:31,0:30:84.69:0,85,1611	0/0:25,0:23:59.92:0,60,1046	0/1:32,1:33:40.90:80,0,41	0/1:31,1:32:3.56:141,0,4	1/1:27,0:27:5.71:323,6,0	0/1:30,4:34:25.69:379,0,26	0/1:30,4:34:45.84:203,0,46	1/1:30,1:31:28.28:321,28,0	0/1:20,0:20:45.44:97,0,45	0/1:35,2:37:67:88,0,67	0/1:22,2:24:10.88:208,0,11	0/1:29,1:30:19.02:252,0,19	1/1:0,18:18:48.04:443,48,0	0/1:21,1:22:34.40:110,0,34	0/1:25,1:26:14.97:182,0,15	0/1:18,0:18:19.10:37,0,19	1/1:9,0:9:4.40:34,4,0	0/1:21,1:22:35.66:36,0,67	1/1:20,0:20:6.55:136,7,0	0/1:29,1:30:91.45:150,0,91	0/1:16,0:16:17.50:17,0,19	0/1:27,1:28:39.75:82,0,40	0/0:22,0:22:63.22:0,63,1268	0/1:20,1:21:17.10:204,0,17	0/1:30,0:30:80.66:135,0,81	0/1:20,2:22:11.59:100,0,12
chr10	12863212	.	GTGTC	G	546.09	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=0.174;DP=712;FS=0.000;HRun=0;HaplotypeScore=266.5575;InbreedingCoeff=0.7409;MQ=71.75;MQ0=0;MQRankSum=-4.562;QD=21.84;ReadPosRankSum=-3.973;VQSLOD=1.7199;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:96.33:0,96,2653	0/1:6,0:6:2.60:3,0,255	0/0:28,0:27:67.66:0,68,2035	0/0:25,0:23:57.20:0,57,1463	0/0:31,0:31:73.45:0,73,1179	0/0:33,0:33:63.51:0,64,1250	0/0:26,0:26:62.55:0,63,830	0/0:33,0:33:67.83:0,68,1276	0/0:35,0:35:42.38:0,42,1272	0/0:31,0:31:33.82:0,34,1174	0/0:20,0:20:27.40:0,27,705	0/0:39,0:39:81.03:0,81,1663	0/0:24,0:24:22.92:0,23,779	0/0:31,0:31:29.48:0,29,959	1/1:2,17:18:51.15:640,51,0	0/0:21,0:21:58.43:0,58,963	0/0:25,0:25:31.98:0,32,974	0/0:19,0:19:45.10:0,45,748	0/0:11,0:11:33.07:0,33,486	0/0:24,0:24:57.18:0,57,984	0/0:20,0:20:42.08:0,42,656	0/0:32,0:32:63.53:0,64,1326	0/0:16,0:16:37.01:0,37,642	0/0:29,0:29:72.78:0,73,1221	0/0:21,0:21:63.20:0,63,1551	0/0:24,0:24:51.92:0,52,901	0/0:30,0:30:87.18:0,87,1392	0/0:24,0:24:69.15:0,69,1056
chr10	12865007	.	A	AC	2012.07	PASS	AB=0.828;AC=37;AF=0.661;AN=56;BaseQRankSum=0.933;DP=529;FS=2.453;HRun=0;HaplotypeScore=86.6874;InbreedingCoeff=0.1077;MQ=47.75;MQ0=59;MQRankSum=-1.343;QD=5.37;ReadPosRankSum=-0.258;VQSLOD=3.4254;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:55.40:0,55,540	1/1:6,0:4:10.17:68,10,0	0/0:43,0:5:5.16:0,5,61	0/0:65,0:16:17.24:0,17,167	1/1:7,11:13:16.86:94,17,0	1/1:4,3:5:5.50:36,5,0	0/1:14,1:11:11.55:46,0,12	1/1:16,0:16:31.48:208,31,0	0/1:11,1:11:15.48:38,0,15	1/1:10,6:11:29.18:220,29,0	1/1:12,3:13:15.54:155,16,0	0/1:10,3:9:10.81:25,0,11	0/1:15,1:15:23.47:23,0,27	0/1:12,2:11:17.05:34,0,17	0/1:12,4:13:0.82:90,0,1	1/1:15,5:16:18.11:140,18,0	0/1:10,10:15:15.25:49,0,15	0/1:13,0:9:11.25:12,0,11	1/1:14,1:12:7:96,7,0	0/1:16,2:13:5.25:143,0,5	1/1:18,2:13:7.51:128,8,0	0/1:6,9:9:18.11:34,0,18	1/1:13,2:15:32.51:198,33,0	1/1:18,2:18:5.53:81,6,0	0/0:20,0:18:47.81:0,48,419	1/1:17,1:12:7.95:163,8,0	1/1:3,14:15:11.89:91,12,0	0/1:8,12:13:8.34:14,0,8
chr10	12865014	.	A	AGAGAGAGAGAG	2967.65	PASS	AB=0.961;AC=33;AF=0.589;AN=56;BaseQRankSum=-1.861;DP=486;FS=4.111;HRun=0;HaplotypeScore=120.5494;InbreedingCoeff=0.1178;MQ=41.42;MQ0=62;MQRankSum=-3.386;QD=9.60;ReadPosRankSum=2.566;VQSLOD=2.1140;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:54.08:0,54,1041	1/1:3,0:1:2.37:8,2,0	0/0:33,0:3:5.93:0,6,52	0/0:55,0:10:16.87:0,17,236	0/0:16,0:10:0:0,0,0	1/1:8,0:5:0.80:50,1,0	1/1:16,0:12:7.08:124,7,0	0/1:14,0:14:88.46:88,0,104	0/1:11,0:10:9.46:98,0,9	0/1:17,0:11:27.10:134,0,27	0/1:13,0:11:17.04:17,0,18	1/1:14,0:9:1.18:84,1,0	1/1:8,7:17:1.24:488,1,0	0/1:6,0:10:11.50:292,0,11	1/1:15,0:13:11.60:234,12,0	1/1:19,0:15:20.65:346,21,0	0/1:16,0:11:9.90:262,0,10	1/1:14,0:10:8.99:168,9,0	0/1:13,0:11:30.72:31,0,111	0/0:18,0:13:13.56:0,14,180	0/1:18,0:11:5.43:5,0,9	0/1:15,0:8:15.15:103,0,15	0/0:10,0:10:0.47:0,0,1	1/1:19,0:17:2.37:116,2,0	0/0:19,0:17:48.14:0,48,1036	1/1:18,0:9:14.88:314,15,0	1/1:16,0:14:8.37:112,8,0	1/1:17,0:8:6.18:57,6,0
chr10	12865016	.	A	AGAGAGAGAGAG	3836.21	PASS	AB=0.938;AC=37;AF=0.661;AN=56;BaseQRankSum=-2.252;DP=490;FS=9.591;HRun=0;HaplotypeScore=122.4820;InbreedingCoeff=0.2894;MQ=39.20;MQ0=63;MQRankSum=-2.971;QD=11.38;ReadPosRankSum=2.752;VQSLOD=1.9194;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:45.04:0,45,637	1/1:3,0:1:2.50:9,2,0	0/0:33,0:3:6.01:0,6,61	0/0:53,0:9:5.13:0,5,164	0/1:17,0:11:0.17:0,0,0	1/1:8,0:4:5.72:78,6,0	1/1:18,0:13:16.29:225,16,0	0/1:15,0:15:56.13:161,0,56	0/1:6,5:14:6.48:131,0,6	0/1:16,0:10:17.12:119,0,17	0/0:13,0:10:4.65:0,5,19	1/1:14,0:9:1.67:108,2,0	1/1:18,0:17:20.61:607,21,0	1/1:10,1:8:14.20:411,14,0	1/1:16,0:13:11.62:220,12,0	1/1:9,0:14:14.68:247,15,0	1/1:16,0:11:14.02:335,14,0	1/1:14,0:10:8.94:172,9,0	0/1:14,0:12:32.93:33,0,71	0/1:18,0:13:27.47:27,0,74	1/1:18,0:11:6.27:49,6,0	0/1:15,0:7:3.92:134,0,4	0/0:10,0:10:0:0,0,1	1/1:18,1:17:2.54:139,3,0	0/0:18,0:16:44.59:0,45,800	1/1:17,1:10:14.52:425,15,0	1/1:16,0:14:11.53:158,12,0	1/1:18,0:8:8.70:47,9,0
chr10	12865018	.	A	AGAGAGAGAGAG	8147.96	PASS	AB=1.000;AC=41;AF=0.732;AN=56;BaseQRankSum=-3.223;DP=560;FS=0.779;HRun=0;HaplotypeScore=154.2622;InbreedingCoeff=0.5183;MQ=38.52;MQ0=64;MQRankSum=-2.449;QD=18.95;ReadPosRankSum=2.211;VQSLOD=4.0913;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:24:23.93:0,24,218	0/1:4,0:2:1.86:6,0,2	0/0:30,0:3:5.91:0,6,38	0/0:45,0:7:4.11:0,4,47	1/1:22,0:16:8.95:258,9,0	1/1:9,0:6:9.13:119,9,0	1/1:22,0:17:20.12:453,20,0	1/1:18,0:18:24.78:312,25,0	0/1:19,0:18:1.91:188,0,2	1/1:27,0:20:51.49:1122,51,0	0/1:16,0:13:4.37:6,0,4	1/1:11,7:18:11.07:333,11,0	1/1:20,0:20:29.77:852,30,0	1/1:13,0:10:14.67:455,15,0	1/1:9,5:13:8.80:377,9,0	1/1:18,0:14:13.78:205,14,0	1/1:22,0:17:28.41:695,28,0	1/1:16,0:12:9.50:306,10,0	1/1:16,0:14:14.21:114,14,0	1/1:19,0:14:9.49:125,9,0	1/1:21,0:14:11.41:194,11,0	0/1:21,0:10:1.40:161,0,1	0/0:13,0:13:0:0,0,0	0/1:22,0:20:6.41:132,0,6	0/0:18,0:16:15.04:0,15,405	1/1:26,0:17:41.24:1177,41,0	1/1:18,0:16:17.71:421,18,0	1/1:20,0:10:18.82:139,19,0
chr10	12865429	.	TACACAC	T	5554.81	PASS	AB=0.786;AC=36;AF=0.692;AN=52;BaseQRankSum=4.750;DP=632;FS=16.788;HRun=0;HaplotypeScore=139.0932;InbreedingCoeff=0.5607;MQ=60.23;MQ0=8;MQRankSum=-6.033;QD=11.60;ReadPosRankSum=-0.135;VQSLOD=3.1429;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:33:18.04:0,18,370	1/1:2,4:6:6.02:119,6,0	./.	0/0:24,0:20:3.01:0,3,41	0/1:11,0:11:0:0,0,0	1/1:11,0:25:27.09:361,27,0	1/1:23,0:40:30.10:413,30,0	0/0:12,0:17:10.10:0,10,80	1/1:14,9:24:9.48:146,9,0	1/1:15,11:26:19.72:384,20,0	1/1:5,5:10:15.05:286,15,0	1/1:15,15:31:40.85:799,41,0	1/1:11,10:22:15.05:287,15,0	1/1:13,11:26:21.03:359,21,0	0/1:14,10:25:0.89:381,0,1	1/1:9,13:23:33.02:635,33,0	1/1:20,11:32:14.75:241,15,0	1/1:12,6:18:9.03:184,9,0	0/0:19,0:19:11.90:0,12,93	0/1:18,0:22:0.27:1,0,0	0/1:19,1:35:23.47:23,0,63	1/1:6,2:9:6.02:123,6,0	0/1:10,6:16:0:0,0,0	0/1:22,9:32:15.78:94,0,16	0/0:11,0:20:24.08:0,24,631	1/1:15,6:21:14.82:191,15,0	1/1:10,11:22:27.09:529,27,0	./.
chr10	12866777	.	C	CTTTA	15348.88	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-6.936;DP=374;FS=4.116;HRun=0;HaplotypeScore=55.0545;InbreedingCoeff=0.8215;MQ=60.10;MQ0=3;MQRankSum=-1.476;QD=47.08;ReadPosRankSum=-0.582;VQSLOD=4.5635;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:60.20:0,60,1017	1/1:0,6:7:11.96:245,12,0	0/0:6,0:5:5.81:0,6,79	0/0:4,0:4:9.03:0,9,138	1/1:3,8:12:23.93:447,24,0	1/1:3,7:10:18.06:457,18,0	1/1:5,9:14:21.07:525,21,0	1/1:11,28:44:99:2466,117,0	1/1:1,5:6:15.05:374,15,0	1/1:2,3:5:15.05:341,15,0	1/1:4,5:12:21.07:475,21,0	1/1:2,3:6:6.02:152,6,0	1/1:1,4:5:6.02:152,6,0	1/1:3,9:12:18.06:457,18,0	1/1:4,4:8:15.05:353,15,0	1/1:2,12:15:30.10:761,30,0	1/1:11,35:45:81.28:2052,81,0	1/1:8,28:36:72.25:1790,72,0	1/1:2,10:12:30.10:700,30,0	1/1:3,10:13:36.12:878,36,0	1/1:3,5:8:12.04:283,12,0	1/1:2,3:5:9.03:229,9,0	1/1:1,4:6:15.05:359,15,0	1/1:1,6:8:9.03:229,9,0	0/0:15,0:15:45.13:0,45,737	1/1:5,12:18:39.13:949,39,0	1/1:2,9:9:18.06:370,18,0	1/1:1,4:6:12.04:305,12,0
chr10	12867419	.	C	CAG	25879.28	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-12.367;DP=635;FS=3.100;HRun=0;HaplotypeScore=66.2777;InbreedingCoeff=0.9970;MQ=86.63;MQ0=2;MQRankSum=-4.592;QD=48.92;ReadPosRankSum=3.442;VQSLOD=6.0732;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,129,1795	1/1:2,12:15:36.12:674,36,0	0/0:20,0:20:51.13:0,51,699	0/0:24,0:24:17.03:0,17,547	1/1:1,20:21:57.20:1067,57,0	1/1:0,20:20:48.16:899,48,0	1/1:2,25:27:69.24:1292,69,0	1/1:1,27:28:84.27:1503,84,0	1/1:0,22:22:63.22:1180,63,0	1/1:0,21:21:60.16:1030,60,0	1/1:0,12:12:36.12:673,36,0	1/1:2,26:29:75.26:1391,75,0	1/1:2,23:25:69.19:1250,69,0	1/1:0,15:15:45.15:843,45,0	1/1:1,33:33:90.31:1685,90,0	1/1:0,24:24:72.25:1345,72,0	1/1:2,30:32:75.26:1404,75,0	1/1:1,23:24:69.24:1292,69,0	1/1:1,16:16:48.14:837,48,0	1/1:1,22:24:63.22:1178,63,0	1/1:1,19:20:51.17:955,51,0	1/1:1,20:21:60.21:1113,60,0	1/1:1,14:15:39.13:730,39,0	1/1:0,22:24:54.19:1011,54,0	0/0:17,0:17:48.16:0,48,705	1/1:2,13:15:42.14:779,42,0	1/1:1,26:28:59.98:1123,60,0	1/1:0,15:15:35.33:625,35,0
chr10	12868135	.	AAAAAG	A	17623.13	PASS	AB=0.511;AC=47;AF=0.839;AN=56;BaseQRankSum=5.497;DP=577;FS=9.908;HRun=0;HaplotypeScore=116.2996;InbreedingCoeff=0.9031;MQ=63.22;MQ0=1;MQRankSum=-4.333;QD=36.95;ReadPosRankSum=2.561;VQSLOD=4.3334;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,111,2856	1/1:1,11:12:21.01:363,21,0	0/0:29,0:24:17.45:0,17,913	0/0:15,0:8:20.53:0,21,357	1/1:5,15:20:50.08:787,50,0	1/1:0,23:23:54.15:1003,54,0	0/1:1,22:23:2.66:527,0,3	1/1:2,24:26:71.87:1131,72,0	1/1:0,12:12:18.06:347,18,0	1/1:1,14:15:39.10:684,39,0	1/1:1,16:17:44.89:602,45,0	1/1:1,22:23:54.18:1036,54,0	1/1:0,17:17:33.11:634,33,0	1/1:1,16:17:30.10:578,30,0	1/1:1,22:23:39.13:750,39,0	1/1:0,13:13:24.08:461,24,0	1/1:0,30:30:60.21:1152,60,0	1/1:0,31:31:60.21:1153,60,0	1/1:1,17:17:51.01:676,51,0	1/1:3,14:17:43.01:727,43,0	1/1:0,21:21:36.03:585,36,0	1/1:2,16:18:33.10:634,33,0	1/1:1,18:19:35.82:633,36,0	1/1:1,24:25:54.10:1002,54,0	0/0:17,0:17:51.16:0,51,1372	1/1:1,26:27:74.89:1205,75,0	1/1:0,20:20:33.09:571,33,0	1/1:1,9:10:23.94:384,24,0
chr10	12868838	.	A	ATATT	27175.53	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=6.309;DP=594;FS=5.939;HRun=0;HaplotypeScore=136.0825;InbreedingCoeff=0.9906;MQ=65.44;MQ0=0;MQRankSum=-9.483;QD=53.71;ReadPosRankSum=-1.573;VQSLOD=5.6419;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,105,1886	1/1:1,9:10:30.06:661,30,0	0/0:12,0:12:27.08:0,27,451	0/0:21,0:21:48.15:0,48,800	1/1:1,19:20:54.13:1121,54,0	1/1:2,25:28:69.15:1598,69,0	1/1:2,14:16:39.09:941,39,0	1/1:13,18:38:84.20:1649,84,0	1/1:4,10:14:33.03:742,33,0	1/1:7,25:33:81.27:2089,81,0	1/1:1,11:12:30.10:766,30,0	1/1:4,15:19:48.16:1164,48,0	1/1:8,16:25:47.88:1149,48,0	1/1:3,13:17:39.10:869,39,0	1/1:3,19:22:57.11:1232,57,0	1/1:3,15:19:36.12:858,36,0	1/1:4,22:25:45.15:1121,45,0	1/1:5,17:23:48.16:1263,48,0	1/1:6,22:30:84.29:2141,84,0	1/1:4,16:21:59.92:1061,60,0	1/1:7,17:24:54.14:1209,54,0	1/1:2,17:19:51.13:1163,51,0	1/1:6,12:18:33.02:698,33,0	1/1:4,18:23:37.37:903,37,0	0/0:17,0:17:51.17:0,51,937	1/1:3,14:17:42.14:1096,42,0	1/1:7,21:27:54.14:1362,54,0	1/1:0,4:4:12.04:316,12,0
chr10	12869643	.	A	AATTG	545.88	PASS	AB=0.909;AC=24;AF=0.429;AN=56;BaseQRankSum=6.013;DP=245;FS=6.692;HRun=0;HaplotypeScore=66.7528;InbreedingCoeff=0.1983;MQ=61.46;MQ0=2;MQRankSum=-4.528;QD=3.98;ReadPosRankSum=2.907;VQSLOD=0.7212;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:39.11:0,39,664	0/0:3,0:3:6.57:0,7,30	0/0:9,0:8:18.05:0,18,325	0/0:13,0:11:12.49:0,12,362	0/1:3,0:10:26.38:26,0,98	0/0:5,0:5:9.79:0,10,39	0/1:9,0:9:35.98:53,0,36	0/0:27,0:26:38.26:0,38,485	1/1:3,0:3:3.01:31,3,0	0/1:6,0:6:12.57:13,0,130	0/1:6,1:11:52.37:52,0,54	1/1:11,0:11:1.57:12,2,0	1/1:12,0:12:11.39:100,11,0	0/0:4,0:4:3.99:0,4,15	1/1:2,0:2:3.01:31,3,0	1/1:6,0:6:6.01:61,6,0	0/1:20,0:20:40.97:41,0,59	1/1:13,0:13:10.22:53,10,0	0/1:7,0:6:43.19:70,0,43	0/1:4,0:4:12.40:12,0,76	1/1:2,0:2:5.99:49,6,0	0/0:4,0:4:11.36:0,11,57	0/0:2,0:2:4.12:0,4,18	0/0:3,0:3:5.68:0,6,28	0/0:11,0:11:27.06:0,27,478	0/1:13,0:13:56.23:59,0,56	1/1:8,0:8:6.01:58,6,0	0/0:14,0:13:18.78:0,19,142
chr10	12869644	.	T	TTATTATTGC	8677.19	PASS	AB=0.667;AC=47;AF=0.839;AN=56;BaseQRankSum=-0.082;DP=295;FS=10.341;HRun=0;HaplotypeScore=65.4228;InbreedingCoeff=0.5864;MQ=63.49;MQ0=2;MQRankSum=-3.216;QD=35.13;ReadPosRankSum=0.320;VQSLOD=3.2105;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:13:39.08:0,39,682	1/1:3,0:3:9.03:177,9,0	0/0:9,0:8:20.79:0,21,233	0/0:14,0:12:7.02:0,7,298	1/1:9,0:11:28.90:377,29,0	1/1:3,0:5:15.04:314,15,0	1/1:9,0:9:27.09:446,27,0	1/1:27,0:26:66.23:1249,66,0	1/1:1,3:7:3.01:148,3,0	1/1:2,3:8:18.02:333,18,0	1/1:10,2:11:24.24:511,24,0	1/1:2,11:16:3.01:125,3,0	1/1:1,1:14:12.04:316,12,0	1/1:1,0:4:2.74:12,3,0	1/1:1,0:11:3.01:129,3,0	1/1:1,0:11:6.02:258,6,0	1/1:5,14:27:19.77:573,20,0	1/1:4,0:14:18.06:551,18,0	0/1:5,0:9:11.89:580,0,12	1/1:4,0:4:8.98:129,9,0	1/1:2,0:2:6.02:99,6,0	1/1:4,0:4:12.04:198,12,0	1/1:4,0:4:6.02:97,6,0	1/1:3,0:3:8.99:119,9,0	0/0:12,0:12:29.76:0,30,569	1/1:2,13:18:38.92:944,39,0	1/1:0,7:9:6.02:296,6,0	1/1:14,0:13:39.12:695,39,0
chr10	12870843	.	A	AT	9324.56	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-10.149;DP=508;FS=1.823;HRun=9;HaplotypeScore=50.3589;InbreedingCoeff=0.9760;MQ=68.98;MQ0=0;MQRankSum=-1.342;QD=25.90;ReadPosRankSum=3.281;VQSLOD=5.2893;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:83.95:0,84,724	1/1:3,5:9:17.84:167,18,0	0/0:11,0:11:5.91:0,6,126	0/0:16,0:11:15.34:0,15,105	1/1:5,25:30:43.05:676,43,0	1/1:1,17:18:45.12:498,45,0	1/1:3,15:18:36.10:398,36,0	0/0:30,0:30:71.86:0,72,613	1/1:4,10:14:28.29:290,28,0	1/1:1,16:17:48.10:518,48,0	1/1:4,19:23:54.15:597,54,0	1/1:2,11:14:27.07:295,27,0	1/1:0,15:16:41.95:446,42,0	1/1:2,22:24:57.15:630,57,0	1/1:1,17:20:50.80:526,51,0	1/1:1,7:8:21.06:232,21,0	1/1:3,33:36:99:1086,99,0	1/1:3,16:19:39.10:428,39,0	0/0:13,0:13:35.99:0,36,313	0/0:15,0:15:38.98:0,39,339	0/0:16,0:16:35.96:0,36,313	1/1:2,7:9:21.06:231,21,0	1/1:1,14:16:35.75:373,36,0	1/1:0,11:11:30.08:332,30,0	0/0:15,0:16:35.02:0,35,293	1/1:0,22:22:63.17:697,63,0	1/1:3,19:21:29.62:540,30,0	1/1:1,13:14:33.09:365,33,0
chr10	12871675	.	AT	A	6815.95	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=0.619;DP=547;FS=5.015;HRun=11;HaplotypeScore=79.2070;InbreedingCoeff=0.9969;MQ=61.57;MQ0=1;MQRankSum=2.669;QD=19.42;ReadPosRankSum=4.501;VQSLOD=5.7557;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:66.97:0,67,684	1/1:3,9:12:20.96:172,21,0	0/0:13,0:10:20.79:0,21,182	0/0:13,0:10:24.02:0,24,238	1/1:5,26:31:68.84:561,69,0	0/0:20,1:21:35.49:0,35,571	0/0:22,0:22:54.14:0,54,575	0/0:8,1:33:49.87:0,50,360	1/1:4,16:20:44.79:354,45,0	1/1:4,23:27:65.88:537,66,0	1/1:0,20:20:59.89:487,60,0	1/1:3,19:22:56.93:468,57,0	1/1:4,19:24:49.96:400,50,0	1/1:1,9:10:23.97:197,24,0	1/1:2,12:15:38.95:320,39,0	1/1:0,10:10:29.97:246,30,0	1/1:2,17:19:35.95:295,36,0	1/1:1,18:19:44.87:358,45,0	0/0:5,0:16:31.59:0,32,182	0/0:4,0:19:48.95:0,49,283	0/0:2,0:11:25.64:0,26,129	1/1:1,17:18:35.56:276,36,0	1/1:2,16:19:49.94:394,50,0	1/1:1,18:19:44.94:369,45,0	0/0:17,1:18:26.48:0,26,481	1/1:3,21:24:62.82:502,63,0	1/1:1,34:35:86.83:707,87,0	1/1:0,7:7:20.98:172,21,0
chr10	12871919	.	AT	A	7300.33	PASS	AB=1.000;AC=41;AF=0.732;AN=56;BaseQRankSum=4.188;DP=583;FS=3.524;HRun=12;HaplotypeScore=91.1902;InbreedingCoeff=0.9219;MQ=57.14;MQ0=0;MQRankSum=0.684;QD=16.98;ReadPosRankSum=5.458;VQSLOD=5.4884;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,1:35:32.02:0,32,557	1/1:1,8:9:23.91:186,24,0	0/1:5,0:5:6.97:7,0,66	0/0:8,0:8:18.02:0,18,172	1/1:3,20:24:46.51:337,47,0	1/1:3,20:23:56.76:441,57,0	1/1:2,11:13:23.91:186,24,0	0/0:11,1:30:37.41:0,37,312	1/1:3,14:18:40.88:308,41,0	1/1:5,23:29:65.24:512,65,0	1/1:2,15:17:41.73:318,42,0	1/1:2,17:21:45.90:337,46,0	1/1:4,14:18:29.85:232,30,0	1/1:2,22:24:50.80:394,51,0	1/1:3,25:28:68.72:534,69,0	1/1:1,12:14:31.92:238,32,0	1/1:2,20:24:55.64:410,56,0	1/1:4,16:20:49.73:390,50,0	0/0:10,0:23:51.91:0,52,316	0/0:6,0:26:60.56:0,61,346	0/0:3,0:14:25.68:0,26,133	1/1:0,13:13:29.82:227,30,0	1/1:3,13:17:43.56:319,44,0	1/1:2,24:28:66.64:489,67,0	0/0:17,0:17:45.06:0,45,444	1/1:9,21:30:53.72:415,54,0	1/1:4,38:42:98.59:766,99,0	1/1:1,12:13:32.87:255,33,0
chr10	12872104	.	A	AT	2923.73	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-6.175;DP=562;FS=3.039;HRun=5;HaplotypeScore=106.9401;InbreedingCoeff=0.9838;MQ=66.05;MQ0=2;MQRankSum=1.838;QD=20.88;ReadPosRankSum=-2.005;VQSLOD=2.1540;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,114,1215	0/0:6,0:5:14.44:0,14,78	0/0:15,0:7:11.94:0,12,102	0/0:20,0:16:15.93:0,16,180	0/0:16,0:16:24.14:0,24,108	1/1:1,21:22:37.99:522,38,0	1/1:11,13:24:45.28:459,45,0	1/1:7,27:34:76.54:783,77,0	0/0:18,0:18:42.46:0,42,268	0/0:35,0:35:92.20:0,92,710	0/0:21,0:21:46.43:0,46,266	0/0:17,0:17:41.74:0,42,340	0/0:15,0:15:31.38:0,31,186	0/0:18,0:18:34.75:0,35,222	0/0:22,0:22:62.12:0,62,439	0/0:7,0:7:17.73:0,18,117	0/0:22,0:22:53.82:0,54,328	0/0:21,0:21:49.87:0,50,324	1/1:6,15:21:45.10:480,45,0	1/1:3,19:21:42.23:448,42,0	1/1:1,16:17:39.10:420,39,0	0/0:9,0:9:19.66:0,20,105	0/0:18,0:18:32.86:0,33,187	0/0:20,0:20:45.98:0,46,248	0/0:20,0:20:39.01:0,39,395	0/0:23,0:23:58.37:0,58,423	0/0:16,0:16:29.39:0,29,217	0/0:23,0:23:52.17:0,52,300
chr10	12872111	.	A	AT	11244.26	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=0.339;DP=551;FS=11.320;HRun=9;HaplotypeScore=69.7979;InbreedingCoeff=0.9813;MQ=63.75;MQ0=4;MQRankSum=-1.594;QD=24.44;ReadPosRankSum=1.361;VQSLOD=5.1356;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,114,989	1/1:1,9:9:18.05:195,18,0	0/0:14,0:5:13.79:0,14,104	0/0:17,0:11:15.02:0,15,100	1/1:1,19:20:38.97:397,39,0	1/1:23,0:23:31.16:547,31,0	1/1:22,0:22:47.76:478,48,0	1/1:31,0:31:69.26:728,69,0	1/1:1,17:18:42.11:465,42,0	1/1:3,31:35:93.08:1002,93,0	1/1:3,16:19:45.12:496,45,0	1/1:4,11:15:24.06:266,24,0	1/1:1,16:17:30.08:332,30,0	1/1:1,14:15:33.09:365,33,0	1/1:3,23:26:57.15:631,57,0	1/1:0,9:9:18.05:199,18,0	1/1:5,16:21:56.16:592,56,0	1/1:1,20:22:50.97:545,51,0	1/1:17,0:16:38.99:440,39,0	1/1:22,0:21:45.96:467,46,0	1/1:16,0:16:42.10:444,42,0	1/1:1,7:8:18.05:199,18,0	1/1:3,15:18:42.11:462,42,0	1/1:0,18:18:51.14:564,51,0	0/0:21,0:21:35.99:0,36,312	1/1:2,18:20:54.15:597,54,0	1/1:4,11:15:24.06:258,24,0	1/1:2,21:23:53.88:576,54,0
chr10	12872558	.	CACGT	C	999.58	PASS	AB=0.989;AC=23;AF=0.411;AN=56;BaseQRankSum=12.968;DP=567;FS=5.829;HRun=0;HaplotypeScore=153.5231;InbreedingCoeff=-0.5482;MQ=51.19;MQ0=9;MQRankSum=-5.455;QD=2.28;ReadPosRankSum=9.236;VQSLOD=1.0450;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:96.33:0,96,2341	0/1:13,0:13:22.83:23,0,152	0/1:25,0:7:7.45:7,0,168	0/1:39,0:13:21.73:22,0,278	0/1:11,0:11:7.40:7,0,72	0/0:13,0:13:5.92:0,6,98	0/0:29,0:29:12.90:0,13,160	0/1:21,0:21:99:142,0,213	0/1:20,0:21:71.56:72,0,72	0/1:19,0:17:27.77:28,0,123	0/0:11,1:12:15.01:0,15,184	0/1:21,0:21:99:114,0,226	0/1:17,1:18:15.37:99,0,15	0/1:18,1:19:67.26:67,0,81	0/0:13,2:15:15.35:0,15,251	0/1:9,0:9:7.87:8,0,115	0/1:32,0:32:99:185,0,318	0/1:17,1:18:82.79:114,0,83	0/1:11,0:11:27.26:27,0,151	0/1:8,0:8:0.03:0,0,64	0/1:61,0:58:53.82:54,0,581	0/1:10,0:9:11.70:24,0,12	1/1:8,1:9:0.69:16,1,0	0/1:35,0:35:14.93:15,0,188	0/0:17,0:17:35.76:0,36,1300	0/1:19,0:18:65.98:66,0,127	0/1:13,0:13:28.79:49,0,29	0/1:6,0:6:14.62:15,0,49
chr10	12872560	.	CGTGT	C	9201.46	PASS	AB=0.789;AC=47;AF=0.839;AN=56;BaseQRankSum=1.111;DP=572;FS=5.672;HRun=0;HaplotypeScore=127.8465;InbreedingCoeff=0.7685;MQ=50.57;MQ0=9;MQRankSum=-2.540;QD=20.68;ReadPosRankSum=0.239;VQSLOD=4.2156;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:46:75.23:0,75,1725	1/1:11,2:13:24.03:351,24,0	0/0:24,0:6:7.81:0,8,97	0/0:41,0:13:4.79:0,5,145	1/1:10,1:11:27.04:398,27,0	0/1:11,4:15:0:0,0,1	1/1:34,0:34:2.79:21,3,0	1/1:6,13:19:31.42:562,31,0	1/1:18,3:21:35.72:594,36,0	1/1:15,5:18:41.22:545,41,0	1/1:10,2:12:11.98:136,12,0	1/1:17,4:21:26.67:319,27,0	1/1:15,2:17:35.09:502,35,0	1/1:17,3:19:33.10:574,33,0	1/1:14,2:16:14.64:171,15,0	1/1:7,0:7:12:171,12,0	1/1:25,6:31:31.48:751,31,0	1/1:18,0:18:44.99:681,45,0	1/1:0,9:9:26.98:364,27,0	1/1:1,6:7:2.88:52,3,0	1/1:51,10:58:69.01:1035,69,0	1/1:8,2:9:18.03:278,18,0	1/1:8,1:9:9.24:136,9,0	1/1:30,6:36:44.85:564,45,0	0/0:16,0:16:45.15:0,45,1035	1/1:13,6:18:35.17:627,35,0	1/1:1,12:13:11.93:210,12,0	1/1:5,1:6:9.50:160,10,0
chr10	12872564	.	T	TGCGTGCGTGCGTAC	725.83	PASS	AB=1.000;AC=20;AF=0.357;AN=56;BaseQRankSum=0.211;DP=581;FS=0.000;HRun=0;HaplotypeScore=236.2665;InbreedingCoeff=-0.4466;MQ=49.48;MQ0=15;MQRankSum=-3.290;QD=1.87;ReadPosRankSum=-2.444;VQSLOD=2.2731;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:75.60:0,76,2765	0/1:12,0:12:10.86:11,0,230	0/0:24,0:6:16.31:0,16,182	0/0:39,0:12:26.49:0,26,387	0/1:12,0:12:65.97:66,0,231	0/0:15,0:15:0.28:0,1,0	1/1:8,20:37:3.35:43,3,0	0/1:17,0:17:41.25:128,0,41	0/1:22,0:22:17.02:17,0,513	0/1:24,0:22:99:166,0,248	0/1:10,0:10:19.21:30,0,19	0/1:21,0:21:6.87:7,0,240	0/0:17,0:16:2.85:0,3,354	0/1:19,0:18:18.09:18,0,511	0/0:16,0:16:18.19:0,18,208	0/1:6,0:6:6.37:6,0,146	0/1:25,0:24:63.14:63,0,468	0/1:21,0:18:25.44:25,0,478	0/1:11,0:11:47.84:48,0,208	0/0:8,0:8:2.57:0,3,64	0/1:60,0:57:82:82,0,847	0/1:12,0:11:3.61:4,0,245	0/0:10,0:10:0.95:0,1,103	0/1:40,0:38:19.64:20,0,232	0/0:18,0:18:51.14:0,51,1660	0/1:20,0:19:60.17:60,0,369	0/1:12,0:12:54.82:55,0,117	0/1:7,0:7:26.23:26,0,245
chr10	12872580	.	TAC	T	2439.72	PASS	AB=0.910;AC=39;AF=0.696;AN=56;BaseQRankSum=8.750;DP=527;FS=68.107;HRun=0;HaplotypeScore=125.4102;InbreedingCoeff=0.1935;MQ=42.88;MQ0=30;MQRankSum=0.690;QD=5.95;ReadPosRankSum=3.187;VQSLOD=0.7155;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,7:43:59.91:0,60,958	1/1:6,2:8:17.11:124,17,0	0/0:18,0:2:2.56:0,3,39	0/0:24,1:3:4.78:0,5,48	1/1:9,0:9:12.98:74,13,0	1/1:10,7:16:3.22:24,3,0	0/0:24,5:28:8.89:0,9,126	0/1:18,0:15:9.45:168,0,9	1/1:18,1:18:6.46:106,6,0	0/1:19,4:21:99:191,0,130	0/1:4,1:5:0:0,0,0	1/1:15,2:17:13.66:130,14,0	1/1:12,5:16:25.39:181,25,0	1/1:22,1:22:19.53:129,20,0	0/1:10,1:10:17.93:18,0,37	0/1:5,1:5:1.10:22,0,1	0/1:23,1:22:22.91:242,0,23	1/1:23,0:18:37.08:310,37,0	0/1:15,0:15:59.01:59,0,160	1/1:7,0:6:2.04:8,2,0	1/1:48,0:45:17.21:340,17,0	1/1:10,1:10:8.26:36,8,0	1/1:7,3:10:6.26:26,6,0	1/1:42,2:38:20.52:131,21,0	0/1:18,3:20:5.41:5,0,566	0/1:16,2:16:52.83:142,0,53	1/1:8,0:8:10.73:66,11,0	1/1:6,1:7:11.78:71,12,0
chr10	12872638	.	TGTG	T	806.58	PASS	AB=1.000;AC=24;AF=0.429;AN=56;BaseQRankSum=6.045;DP=481;FS=7.657;HRun=0;HaplotypeScore=82.5946;InbreedingCoeff=0.3786;MQ=61.94;MQ0=85;MQRankSum=-4.836;QD=3.58;ReadPosRankSum=-2.103;VQSLOD=0.7899;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:44.94:0,45,625	1/1:5,0:4:1.89:18,2,0	0/0:25,0:19:57.16:0,57,686	0/0:28,0:22:60.18:0,60,742	1/1:10,0:10:0.88:17,1,0	0/0:13,0:12:23.58:0,24,349	0/0:32,0:30:42.13:0,42,530	0/0:11,0:9:24.96:0,25,306	1/1:14,0:8:8.29:88,8,0	0/1:19,0:13:35.60:36,0,113	1/1:9,0:6:4.26:43,4,0	1/1:9,8:13:17.89:189,18,0	1/1:12,0:4:8.82:110,9,0	1/1:10,1:6:17.97:229,18,0	0/0:11,0:8:2.98:0,3,23	0/0:13,0:9:4.66:0,5,12	0/1:24,0:17:9.31:9,0,21	0/1:24,0:13:28.14:28,0,183	0/0:14,0:13:38.15:0,38,427	0/0:9,0:9:21.54:0,22,266	0/0:45,0:41:57.53:0,58,820	1/1:5,5:7:8.90:60,9,0	0/1:10,0:9:11.08:11,0,18	0/1:44,0:33:16.35:43,0,16	0/0:17,0:16:36.11:0,36,453	0/1:14,0:9:69.09:69,0,83	1/1:2,0:1:3.01:40,3,0	0/0:8,0:3:5.76:0,6,47
chr10	12875018	.	C	CT	717.19	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=-4.824;DP=406;FS=0.000;HRun=11;HaplotypeScore=51.8299;InbreedingCoeff=0.5467;MQ=74.26;MQ0=0;MQRankSum=-1.143;QD=9.44;ReadPosRankSum=-4.199;VQSLOD=1.1665;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,2:26:0.36:0,0,342	0/0:3,0:3:8.97:0,9,70	0/0:24,0:20:4.99:0,5,105	0/1:18,0:15:4.21:4,0,33	0/0:13,0:13:22.71:0,23,165	0/0:15,1:16:5.39:0,5,222	0/0:9,0:10:17.92:0,18,139	1/1:14,17:31:0.17:450,0,0	0/0:9,0:9:14.92:0,15,116	0/0:14,0:14:35.86:0,36,279	0/0:17,0:17:35.84:0,36,279	0/0:8,0:8:11.94:0,12,92	0/0:4,0:6:11:0,11,76	0/0:4,0:4:8.94:0,9,70	0/0:10,0:11:31.92:0,32,238	0/0:10,0:10:26.88:0,27,205	0/0:24,0:24:59.56:0,60,455	0/0:31,2:32:25.18:0,25,547	1/1:4,8:11:18.03:177,18,0	1/1:4,8:12:21.04:213,21,0	0/0:3,0:3:2.99:0,3,23	0/0:2,0:3:8.01:0,8,52	0/0:10,0:10:17.92:0,18,139	0/0:6,0:6:11.94:0,12,93	0/0:14,0:14:35.85:0,36,279	0/0:17,0:17:32.85:0,33,255	0/0:21,0:23:24.38:0,24,346	0/0:25,0:25:65.73:0,66,511
chr10	12877702	.	A	AT	4102.32	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-5.978;DP=649;FS=11.718;HRun=9;HaplotypeScore=64.6890;InbreedingCoeff=0.9745;MQ=81.02;MQ0=0;MQRankSum=-0.556;QD=27.91;ReadPosRankSum=-3.771;VQSLOD=1.8072;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,132,1142	0/0:9,0:9:17.99:0,18,156	0/0:31,0:30:57.64:0,58,465	0/0:19,0:16:20.84:0,21,167	0/0:28,0:28:80.98:0,81,703	1/1:3,17:20:48.13:531,48,0	1/1:1,20:21:60.16:664,60,0	1/1:5,33:38:96.24:1051,96,0	0/0:21,0:21:59.98:0,60,521	0/0:24,0:24:62.96:0,63,544	0/0:21,0:21:59.95:0,60,512	0/0:19,0:19:50.98:0,51,443	0/0:15,0:15:38.97:0,39,334	0/0:16,0:16:44.98:0,45,391	0/0:21,0:21:53.96:0,54,469	0/0:25,0:25:68.96:0,69,599	0/0:34,0:34:92.96:0,93,807	0/0:20,0:20:56.99:0,57,495	1/1:1,14:16:41.76:415,42,0	1/1:0,20:21:60:645,60,0	1/1:4,27:31:72.19:797,72,0	0/0:22,0:22:32.60:0,33,440	0/0:15,0:15:41.99:0,42,365	0/0:20,1:21:23.81:0,24,436	0/0:20,0:20:50.95:0,51,438	0/0:39,0:39:99:0,108,935	0/0:20,0:19:56.96:0,57,490	0/0:12,0:12:5.61:0,6,210
chr10	12879550	.	ATT	A	1999.70	PASS	AB=0.800;AC=13;AF=0.232;AN=56;BaseQRankSum=2.186;DP=451;FS=17.456;HRun=13;HaplotypeScore=83.1557;InbreedingCoeff=0.8397;MQ=62.20;MQ0=5;MQRankSum=1.939;QD=16.66;ReadPosRankSum=1.361;VQSLOD=1.0086;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:31:70.87:0,71,953	0/0:3,0:3:6.01:0,6,72	0/0:8,0:5:9.01:0,9,86	0/0:7,0:4:8.39:0,8,87	0/0:13,0:14:23.61:0,24,308	1/1:5,12:19:41.51:373,42,0	1/1:5,11:16:30:291,30,0	1/1:8,18:26:44.51:511,45,0	0/0:20,0:20:51.07:0,51,658	0/0:11,0:12:30.10:0,30,419	0/0:5,0:6:10.27:0,10,118	0/0:15,0:16:36:0,36,441	0/0:9,0:8:20.98:0,21,245	0/0:16,0:20:44.59:0,45,565	0/0:10,0:12:23.03:0,23,253	0/0:10,0:10:19.31:0,19,259	0/0:23,0:22:57.16:0,57,799	0/0:19,0:22:53.10:0,53,667	1/1:2,9:10:14.95:194,15,0	1/1:2,11:13:30.01:291,30,0	1/1:4,20:26:44.42:518,44,0	0/0:11,0:15:41.56:0,42,487	0/0:14,0:16:32.51:0,33,349	0/0:28,0:30:65.70:0,66,895	0/1:5,1:8:7.94:8,0,225	0/0:24,0:31:76.60:0,77,898	0/0:18,0:19:53.61:0,54,687	0/0:4,0:3:6.02:0,6,87
chr10	12880690	.	G	GA	91.74	PASS	AB=0.969;AC=12;AF=0.231;AN=52;BaseQRankSum=7.804;DP=300;FS=4.535;HRun=1;HaplotypeScore=211.3349;InbreedingCoeff=-0.1723;MQ=27.28;MQ0=24;MQRankSum=-0.524;QD=0.69;ReadPosRankSum=5.734;VQSLOD=-0.7450;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:5:10.56:0,11,101	1/1:1,1:2:5.75:48,6,0	./.	./.	0/0:11,0:11:3.96:0,4,56	0/1:13,0:11:1.83:2,0,149	0/1:9,1:10:8.52:9,0,159	0/0:12,0:11:20.66:0,21,178	0/0:9,0:8:10.69:0,11,35	0/1:15,0:14:8.54:9,0,168	0/1:11,1:12:6.43:6,0,130	0/0:9,0:8:4.65:0,5,73	0/0:11,0:10:4.99:0,5,113	0/0:11,0:10:7.38:0,7,168	0/0:16,0:16:2.74:0,3,191	0/0:7,0:7:5.41:0,5,100	0/1:19,0:18:23.28:23,0,230	0/0:7,1:8:1.34:0,1,152	0/0:9,0:7:11.94:0,12,131	0/0:12,0:12:20.84:0,21,262	0/0:18,0:14:28.61:0,29,363	0/1:12,0:12:34.54:35,0,66	0/1:14,0:13:15.78:16,0,169	0/1:9,0:9:1.72:2,0,21	0/0:4,0:3:7.22:0,7,60	0/1:10,1:11:49.06:49,0,113	0/1:15,1:16:23.58:24,0,207	0/0:2,0:2:3.15:0,3,12
chr10	12880691	.	G	GA	1370.92	PASS	AB=0.817;AC=21;AF=0.404;AN=52;BaseQRankSum=2.192;DP=281;FS=0.000;HRun=1;HaplotypeScore=181.6183;InbreedingCoeff=-0.4450;MQ=26.98;MQ0=24;MQRankSum=-0.927;QD=6.85;ReadPosRankSum=0.822;VQSLOD=0.5194;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:4:3.48:0,3,37	1/1:1,1:2:5.04:34,5,0	./.	./.	0/0:10,1:11:2.06:0,2,70	0/1:10,1:9:13.03:13,0,103	0/1:6,4:10:35.43:134,0,35	0/0:12,0:11:19.55:0,20,118	0/1:7,0:6:43.87:56,0,44	0/1:11,4:14:50.46:173,0,50	0/1:7,5:12:47.51:48,0,82	0/1:7,1:7:23.15:77,0,23	1/1:5,4:8:17.44:136,17,0	0/1:6,4:9:73.09:73,0,108	0/1:9,4:13:95.32:102,0,95	0/1:6,1:7:29.08:29,0,50	0/1:11,8:18:30.12:174,0,30	0/1:7,0:7:18.26:18,0,85	0/0:7,0:5:8.65:0,9,87	0/1:12,0:12:9.80:10,0,160	0/0:18,0:14:28.46:0,28,252	0/1:8,3:11:30.68:66,0,31	0/1:7,5:11:78.68:79,0,80	0/1:5,4:9:10.82:48,0,11	0/0:4,0:3:6.99:0,7,43	0/1:9,2:11:32.11:137,0,32	0/1:11,4:15:40.12:116,0,40	0/0:2,0:2:3.01:0,3,37
chr10	12880693	.	G	GTAGAGAA	6155.81	PASS	AB=0.915;AC=33;AF=0.635;AN=52;BaseQRankSum=2.238;DP=251;FS=0.000;HRun=0;HaplotypeScore=201.6376;InbreedingCoeff=0.0667;MQ=26.91;MQ0=21;MQRankSum=-0.175;QD=32.57;ReadPosRankSum=3.172;VQSLOD=4.3277;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:4:3.27:0,3,13	1/1:2,0:2:6.02:184,6,0	./.	./.	1/1:11,0:11:19.04:120,19,0	0/1:7,1:7:36.82:190,0,37	0/1:8,0:8:2.56:347,0,3	0/0:13,0:12:6:0,6,137	1/1:7,0:6:15.04:307,15,0	1/1:11,1:11:14.40:493,14,0	0/1:11,1:12:0.22:299,0,0	1/1:6,1:6:17.21:367,17,0	1/1:6,1:6:12.04:273,12,0	0/1:9,0:8:4.02:255,0,4	0/1:12,0:12:34.01:379,0,34	1/1:5,0:5:8.96:144,9,0	0/1:10,5:15:2.24:659,0,2	0/1:7,0:7:98.93:170,0,99	0/1:3,0:5:42.19:42,0,99	0/1:10,0:11:85.07:85,0,190	0/0:18,0:14:8.76:0,9,382	1/1:8,2:10:16.73:373,17,0	0/1:10,1:10:3.51:261,0,4	0/1:8,0:8:17.87:169,0,18	0/0:4,0:3:8.88:0,9,66	1/1:7,2:9:23.05:521,23,0	1/1:9,1:10:18.06:504,18,0	1/1:2,0:2:2.80:15,3,0
chr10	12880696	.	G	GA	955.53	PASS	AB=0.820;AC=19;AF=0.365;AN=52;BaseQRankSum=3.282;DP=256;FS=0.000;HRun=1;HaplotypeScore=183.9736;InbreedingCoeff=-0.3791;MQ=27.14;MQ0=18;MQRankSum=0.586;QD=5.72;ReadPosRankSum=-1.306;VQSLOD=-0.3736;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:4:7.62:0,8,92	0/1:1,1:2:0.26:26,0,0	./.	./.	0/1:10,1:11:3.67:4,0,73	0/0:8,0:7:16.75:0,17,163	0/1:4,4:8:60.36:101,0,60	0/0:13,0:12:28.62:0,29,266	0/1:7,0:7:46.16:69,0,46	0/1:9,3:11:68.67:103,0,69	0/1:8,4:12:41.14:41,0,97	0/1:7,0:6:21.49:66,0,21	1/1:4,3:6:9.29:86,9,0	0/1:5,4:8:88.51:89,0,126	0/1:9,4:13:99:116,0,129	0/1:7,1:8:16.99:17,0,81	0/1:12,3:15:65.09:97,0,65	0/1:7,0:8:5.43:5,0,129	0/0:6,0:5:11.18:0,11,102	0/0:12,0:12:22.42:0,22,269	0/0:18,0:14:34.42:0,34,409	0/1:10,1:11:38.36:52,0,38	0/1:6,4:10:45.36:45,0,93	0/1:4,4:8:31.63:50,0,32	0/0:3,0:3:5.97:0,6,60	0/1:9,0:9:36.08:50,0,36	0/1:7,3:10:71.24:89,0,71	0/0:2,0:2:3.01:0,3,39
chr10	12881684	.	A	AGGGG	1475.26	PASS	AB=0.922;AC=32;AF=0.696;AN=46;BaseQRankSum=3.877;DP=107;FS=0.000;HRun=2;HaplotypeScore=44.8244;InbreedingCoeff=0.1137;MQ=34.52;MQ0=4;MQRankSum=1.319;QD=18.44;ReadPosRankSum=2.591;VQSLOD=0.6840;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:8:18.40:0,18,240	1/1:2,0:2:6.02:110,6,0	./.	./.	./.	0/1:1,4:9:26.69:234,0,27	1/1:1,4:6:15.01:303,15,0	0/0:8,0:7:9.13:0,9,59	1/1:3,0:3:3.01:52,3,0	0/1:3,0:3:8.08:48,0,8	1/1:5,0:4:2.93:27,3,0	0/1:3,0:3:10.75:11,0,41	1/1:1,0:1:3.01:56,3,0	1/1:1,0:1:3.01:44,3,0	1/1:3,0:3:3.01:52,3,0	1/1:3,0:3:8.94:110,9,0	0/1:3,0:3:11.15:47,0,11	./.	0/1:11,0:10:45.53:46,0,111	0/1:10,0:10:17.37:17,0,24	0/0:3,0:3:5:0,5,26	1/1:2,0:2:3.01:54,3,0	1/1:5,0:5:12.04:223,12,0	1/1:5,0:4:3.77:39,4,0	0/0:3,0:3:8.61:0,9,86	./.	1/1:2,0:2:3.01:56,3,0	1/1:2,0:2:6.02:93,6,0
chr10	12881697	.	GGAA	G	1291.13	PASS	AB=1.000;AC=42;AF=0.750;AN=56;BaseQRankSum=-2.265;DP=169;FS=5.541;HRun=0;HaplotypeScore=29.5153;InbreedingCoeff=0.2057;MQ=45.61;MQ0=5;MQRankSum=1.851;QD=9.29;ReadPosRankSum=-1.481;VQSLOD=1.6577;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:13:35.98:0,36,440	1/1:2,0:2:5.92:39,6,0	0/0:5,0:3:9.02:0,9,98	0/0:3,0:3:2.18:0,2,57	1/1:3,0:3:5.99:50,6,0	0/1:10,0:10:27.15:27,0,37	0/1:6,0:6:19.12:19,0,38	1/1:13,0:12:5.14:132,5,0	1/1:0,4:4:3:25,3,0	1/1:5,0:5:12:112,12,0	1/1:7,0:6:7.76:73,8,0	0/1:5,0:5:27.65:52,0,28	1/1:6,0:6:17.85:139,18,0	1/1:4,0:4:11.91:92,12,0	1/1:0,5:5:3:25,3,0	0/1:5,0:4:4.41:49,0,4	1/1:5,0:5:11.83:87,12,0	1/1:2,0:2:6:51,6,0	1/1:12,0:11:8.80:56,9,0	0/1:14,0:14:23.55:24,0,60	0/1:7,0:7:17.75:36,0,18	1/1:3,0:3:5.92:42,6,0	1/1:6,0:6:17.70:115,18,0	1/1:8,0:7:8.99:75,9,0	0/0:7,0:7:17.54:0,18,184	1/1:2,0:2:6.01:56,6,0	1/1:2,0:2:2.94:18,3,0	1/1:3,0:3:8.92:64,9,0
chr10	12882746	.	T	TTG	276.29	PASS	AB=1.000;AC=22;AF=0.423;AN=52;BaseQRankSum=0.334;DP=569;FS=0.000;HRun=0;HaplotypeScore=102.1152;InbreedingCoeff=0.4312;MQ=64.24;MQ0=13;MQRankSum=0.183;QD=0.94;ReadPosRankSum=-2.012;VQSLOD=1.2436;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:34,0:34:0:0,0,0	0/0:10,0:7:5.74:0,6,43	./.	0/1:22,0:14:0:0,0,0	0/0:16,0:15:3:0,3,31	1/1:21,0:21:8.98:73,9,0	1/1:21,5:25:3.01:44,3,0	./.	0/1:11,0:11:0:0,0,0	1/1:14,0:13:1.36:3,1,0	1/1:12,0:11:2.37:8,2,0	0/0:12,0:13:2.81:0,3,14	0/1:21,0:21:0:0,0,0	0/0:15,0:15:2.95:0,3,19	0/0:27,0:27:8.80:0,9,76	0/0:19,0:19:6:0,6,56	0/0:23,0:23:11.88:0,12,118	0/0:19,0:19:2.47:0,2,20	1/1:22,0:22:9.45:72,9,0	1/1:10,0:10:2.99:24,3,0	1/1:44,0:42:15:159,15,0	0/1:25,0:25:1.82:2,0,3	1/1:14,0:14:2.73:24,3,0	0/0:43,0:43:5.59:0,6,93	0/1:17,0:17:3.04:3,0,26	0/0:26,0:24:5.94:0,6,54	0/0:15,0:15:8.98:0,9,77	0/0:6,0:6:2.54:0,3,18
chr10	12882923	.	GC	G	8216.31	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=9.676;DP=557;FS=4.969;HRun=8;HaplotypeScore=61.1918;InbreedingCoeff=0.9922;MQ=76.72;MQ0=1;MQRankSum=-1.655;QD=23.28;ReadPosRankSum=6.667;VQSLOD=4.8472;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,102,1183	1/1:0,6:6:15.02:145,15,0	0/0:20,1:19:34.61:0,35,442	0/0:31,0:28:22.09:0,22,316	1/1:2,11:13:30.04:290,30,0	1/1:2,17:18:45.07:434,45,0	1/1:2,20:22:51.08:493,51,0	0/0:16,0:16:36.03:0,36,386	1/1:2,17:19:48.08:464,48,0	1/1:2,17:19:51.08:492,51,0	1/1:0,16:16:39.01:367,39,0	1/1:1,12:13:33.05:318,33,0	1/1:1,12:13:27.04:261,27,0	1/1:1,16:17:36.06:348,36,0	1/1:2,29:31:69.11:666,69,0	1/1:1,12:13:36.06:348,36,0	1/1:2,30:32:84.13:811,84,0	1/1:1,7:8:18.03:174,18,0	0/0:19,0:19:51.15:0,51,605	0/0:12,0:12:33.06:0,33,362	0/0:49,0:49:99:0,135,1616	1/1:1,14:15:42.07:406,42,0	1/1:1,11:12:30.05:290,30,0	1/1:5,30:35:84.13:811,84,0	0/0:17,0:17:51.13:0,51,593	1/1:2,16:18:48.08:463,48,0	1/1:4,20:24:51.07:492,51,0	1/1:2,6:8:15.02:145,15,0
chr10	12883152	.	AAAAAAAGAAAAAAGAAAAAG	A	5340.66	PASS	AB=0.997;AC=24;AF=0.429;AN=56;BaseQRankSum=6.257;DP=503;FS=81.306;HRun=0;HaplotypeScore=199.6349;InbreedingCoeff=-0.0182;MQ=41.29;MQ0=53;MQRankSum=-2.219;QD=16.59;ReadPosRankSum=0.343;VQSLOD=0.5914;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:33:85.65:0,86,4464	0/0:3,0:3:0:0,0,0	0/0:15,0:2:3.48:0,3,127	0/0:18,0:3:8.95:0,9,244	0/1:21,0:19:25.04:208,0,25	1/1:16,3:18:32.35:1028,32,0	1/1:5,13:18:8.68:338,9,0	0/0:32,0:28:66.70:0,67,2385	0/1:12,0:10:28.37:179,0,28	0/1:10,0:10:17.92:159,0,18	0/1:16,0:16:9.57:256,0,10	0/1:18,0:18:38.51:202,0,39	0/0:7,0:6:3.01:0,3,31	1/1:13,0:12:17.13:308,17,0	0/1:14,0:13:12.42:343,0,12	0/1:24,0:24:56.23:350,0,56	0/1:28,0:23:27.98:229,0,28	0/1:22,1:15:73.27:516,0,73	0/0:29,0:26:75.26:0,75,3149	0/0:17,0:17:49.98:0,50,1832	0/0:4,0:4:8.70:0,9,305	0/1:18,0:17:99:233,0,122	1/1:12,1:11:5.72:254,6,0	1/1:24,0:17:5.36:232,5,0	0/0:19,0:18:41.81:0,42,1873	0/1:17,0:14:29.29:29,0,52	0/1:24,0:22:33.58:361,0,34	1/1:10,0:8:0.34:116,0,0
chr10	12883153	.	AAAAAAGAAAAAAGAAAAAG	A	6308.59	PASS	AB=0.738;AC=33;AF=0.589;AN=56;BaseQRankSum=3.715;DP=496;FS=74.538;HRun=0;HaplotypeScore=188.3674;InbreedingCoeff=0.5156;MQ=41.63;MQ0=51;MQRankSum=-3.407;QD=20.03;ReadPosRankSum=-0.023;VQSLOD=0.8461;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:33:81.97:0,82,4217	0/0:3,0:3:0:0,0,0	0/0:14,0:2:3.01:0,3,135	0/0:18,0:3:9.02:0,9,241	1/1:10,11:19:0.16:252,0,0	1/1:19,0:18:32.55:874,33,0	1/1:18,0:18:8.76:296,9,0	0/0:31,0:27:68.23:0,68,2159	1/1:12,0:10:17.12:257,17,0	1/1:10,0:10:10.17:218,10,0	1/1:16,0:16:1.57:263,2,0	1/1:8,9:17:5.14:255,5,0	0/0:7,0:6:2.22:0,2,8	1/1:12,1:12:17.54:433,18,0	1/1:12,2:13:20.39:514,20,0	0/1:7,17:24:14.10:424,0,14	1/1:9,17:23:3.81:289,4,0	0/1:23,0:15:11.19:626,0,11	0/0:28,0:26:75.26:0,75,2873	0/0:19,0:19:55.74:0,56,1763	0/0:4,0:4:8.70:0,9,288	0/1:7,10:16:18.78:296,0,19	1/1:5,8:11:6.29:261,6,0	1/1:11,11:16:5.78:283,6,0	0/0:18,0:17:42.06:0,42,1784	1/1:17,0:14:4.65:69,5,0	1/1:24,0:22:23.21:532,23,0	1/1:5,4:7:8.25:167,8,0
chr10	12883154	.	AAAAAGAAAAAAGAAAAAG	A	5597.29	PASS	AB=1.000;AC=32;AF=0.571;AN=56;BaseQRankSum=5.806;DP=481;FS=53.654;HRun=0;HaplotypeScore=177.8445;InbreedingCoeff=0.5459;MQ=42.05;MQ0=50;MQRankSum=-2.776;QD=18.66;ReadPosRankSum=0.239;VQSLOD=1.8609;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:33:75.03:0,75,3893	0/0:3,0:3:0:0,0,0	0/0:15,0:2:3.01:0,3,125	0/0:18,0:3:9.01:0,9,229	0/1:19,0:18:1.30:222,0,1	1/1:16,0:15:32.86:808,33,0	1/1:16,0:16:8.94:279,9,0	0/0:31,0:27:66.17:0,66,2040	1/1:12,0:10:11.40:184,11,0	1/1:9,0:9:5.18:158,5,0	1/1:5,11:16:12.24:299,12,0	1/1:17,0:17:5.49:262,5,0	0/0:6,0:5:2.99:0,3,24	1/1:12,0:11:17.76:417,18,0	1/1:13,0:12:15.74:439,16,0	1/1:24,0:24:7.27:386,7,0	1/1:26,0:23:4.29:256,4,0	0/1:23,0:15:3.95:534,0,4	0/0:29,0:27:78.26:0,78,2691	0/0:18,0:19:55.07:0,55,1651	0/0:4,0:4:8.70:0,9,277	0/1:17,0:16:19.96:262,0,20	1/1:12,0:10:5.94:239,6,0	1/1:20,0:14:5.99:250,6,0	0/0:18,0:17:42.02:0,42,1681	0/1:16,0:13:15.44:15,0,17	1/1:23,0:21:16.46:410,16,0	1/1:9,0:7:8.98:175,9,0
chr10	12883158	.	AG	A	2245.47	PASS	AB=1.000;AC=39;AF=0.722;AN=54;BaseQRankSum=4.020;DP=424;FS=3.262;HRun=1;HaplotypeScore=81.0339;InbreedingCoeff=0.3011;MQ=45.07;MQ0=42;MQRankSum=-3.236;QD=6.31;ReadPosRankSum=-2.822;VQSLOD=-0.2921;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:31:21.68:22,0,359	./.	0/0:18,0:3:2.86:0,3,27	0/0:18,0:3:3.80:0,4,31	0/0:14,0:13:1.51:0,2,13	1/1:14,0:13:8.46:58,8,0	0/1:14,0:14:7.71:11,0,8	1/1:28,0:24:59.08:382,59,0	1/1:12,0:10:9.38:68,9,0	1/1:9,0:9:15.55:92,16,0	0/1:12,0:12:3.84:4,0,11	1/1:14,0:14:5.67:29,6,0	0/0:5,0:4:2.68:0,3,11	1/1:10,0:9:11.79:88,12,0	1/1:9,0:8:5.18:75,5,0	1/1:18,0:18:7.79:30,8,0	1/1:23,0:20:5.19:20,5,0	1/1:19,0:13:11.90:177,12,0	1/1:28,4:29:80.51:591,81,0	1/1:18,4:22:60.55:435,61,0	1/1:4,0:4:11.31:77,11,0	1/1:12,0:11:5.52:27,6,0	0/1:12,0:10:3.78:4,0,4	1/1:15,0:11:5.52:27,6,0	0/1:18,0:17:12.57:13,0,170	0/0:11,0:10:1.61:0,2,10	1/1:18,0:17:16.39:132,16,0	1/1:7,0:6:7.87:31,8,0
chr10	12883690	.	A	ATT	8577.77	PASS	AB=1.000;AC=41;AF=0.732;AN=56;BaseQRankSum=10.426;DP=446;FS=1.415;HRun=8;HaplotypeScore=76.0277;InbreedingCoeff=0.8575;MQ=73.12;MQ0=5;MQRankSum=-1.072;QD=27.76;ReadPosRankSum=2.453;VQSLOD=4.8159;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:81.19:0,81,890	1/1:0,7:8:23.57:342,24,0	0/0:22,0:10:21.93:0,22,195	0/1:35,0:18:6.97:7,0,164	1/1:3,21:25:59.69:865,60,0	1/1:2,0:18:32.32:111,32,0	1/1:1,0:8:11.23:38,11,0	0/0:25,0:25:57.12:0,57,626	1/1:1,7:8:24.05:354,24,0	1/1:4,15:19:39.12:589,39,0	1/1:6,21:27:66.09:945,66,0	1/1:0,8:8:18.06:284,18,0	1/1:3,4:7:9.03:142,9,0	1/1:1,7:9:21.07:323,21,0	1/1:1,10:11:21.07:333,21,0	1/1:1,2:4:3.01:48,3,0	1/1:3,20:23:48.16:762,48,0	1/1:4,16:20:42.14:667,42,0	0/0:20,0:19:42.04:0,42,454	0/0:17,0:17:48.11:0,48,524	0/0:7,0:7:9.01:0,9,100	1/1:1,6:7:18.02:254,18,0	1/1:3,7:10:15.05:238,15,0	1/1:2,8:10:12.04:191,12,0	0/0:17,0:17:48.09:0,48,515	1/1:3,12:15:36.12:562,36,0	1/1:0,18:18:45.15:714,45,0	1/1:0,19:19:51.17:809,51,0
chr10	12885005	.	T	TA	6817.70	PASS	AC=38;AF=0.760;AN=50;BaseQRankSum=9.631;DP=463;FS=11.875;HRun=1;HaplotypeScore=53.2637;InbreedingCoeff=0.9340;MQ=38.23;MQ0=72;MQRankSum=-2.332;QD=22.21;ReadPosRankSum=-0.793;VQSLOD=3.3383;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:31:63.21:0,63,880	1/1:1,2:2:3.01:45,3,0	./.	./.	1/1:4,11:10:9.03:131,9,0	1/1:5,10:9:24.08:358,24,0	1/1:5,11:8:21.04:290,21,0	0/0:28,0:18:54.17:0,54,737	1/1:5,20:17:42.14:626,42,0	1/1:5,6:6:15.05:221,15,0	1/1:1,15:15:33.11:496,33,0	1/1:3,12:11:30.10:451,30,0	1/1:5,19:17:39.13:588,39,0	1/1:5,12:15:24.08:362,24,0	1/1:6,17:19:36.12:537,36,0	1/1:2,17:16:36.12:542,36,0	1/1:2,7:7:15.05:225,15,0	1/1:7,10:11:21.07:315,21,0	0/0:13,0:7:21.02:0,21,259	0/0:21,0:18:33.09:0,33,442	0/0:38,0:31:81.23:0,81,1110	./.	1/1:3,5:5:12.03:161,12,0	1/1:6,15:16:30.09:431,30,0	0/0:18,0:13:27.09:0,27,377	1/1:7,9:7:18.06:271,18,0	1/1:7,15:14:27.09:406,27,0	1/1:2,11:9:24.08:360,24,0
chr10	12885454	.	TA	T	3180.93	PASS	AB=0.826;AC=37;AF=0.685;AN=54;BaseQRankSum=-1.520;DP=308;FS=19.768;HRun=8;HaplotypeScore=55.1649;InbreedingCoeff=0.5961;MQ=71.23;MQ0=1;MQRankSum=-2.117;QD=17.01;ReadPosRankSum=5.405;VQSLOD=2.1637;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:51.05:0,51,545	1/1:0,2:2:6.01:58,6,0	0/0:25,1:11:26:0,26,193	0/0:21,0:11:6.07:0,6,81	1/1:2,12:14:26.94:241,27,0	0/1:9,0:9:18.53:19,0,23	0/1:16,1:17:10.77:11,0,67	0/0:9,0:19:30.81:0,31,193	1/1:1,9:10:24.03:231,24,0	1/1:2,8:10:23.97:210,24,0	1/1:1,6:7:15.02:145,15,0	1/1:1,4:5:9.01:87,9,0	1/1:0,8:8:18.50:174,19,0	1/1:0,7:7:18.03:173,18,0	0/1:1,7:8:17.90:127,0,18	1/1:0,6:6:15.02:145,15,0	1/1:2,32:33:81.13:781,81,0	1/1:2,13:15:36.06:347,36,0	0/0:4,0:18:43.53:0,44,247	./.	0/0:0,0:5:14.38:0,14,73	1/1:1,0:1:3:25,3,0	1/1:0,2:2:3:29,3,0	1/1:1,6:7:3:29,3,0	0/0:5,0:5:15.02:0,15,164	1/1:2,9:11:24.03:227,24,0	1/1:1,5:6:15.02:144,15,0	1/1:3,5:8:3.27:170,3,0
chr10	12885524	.	AACACACACACACAC	A	3408.29	PASS	AB=1.000;AC=31;AF=0.674;AN=46;BaseQRankSum=5.459;DP=217;FS=22.258;HRun=0;HaplotypeScore=81.0647;InbreedingCoeff=0.6133;MQ=75.27;MQ0=13;MQRankSum=-4.426;QD=30.43;ReadPosRankSum=3.818;VQSLOD=0.8028;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:32.96:0,33,1283	1/1:1,0:2:3.01:98,3,0	0/1:24,0:12:2.72:3,0,311	0/0:24,0:16:23.95:0,24,532	./.	1/1:1,0:9:15.05:489,15,0	1/1:6,0:13:3.01:98,3,0	0/0:19,0:18:29.98:0,30,806	1/1:6,3:9:12.04:409,12,0	1/1:1,0:1:3.01:105,3,0	1/1:3,0:3:6.01:76,6,0	./.	1/1:0,2:2:6.02:241,6,0	1/1:0,0:1:3.01:98,3,0	1/1:2,2:3:3.01:120,3,0	1/1:2,1:3:3.01:120,3,0	1/1:11,2:11:9.03:207,9,0	1/1:7,2:9:11.97:201,12,0	0/0:10,0:8:12.03:0,12,397	0/0:2,0:2:3.01:0,3,139	0/0:19,0:19:45.14:0,45,2440	./.	./.	1/1:1,2:3:3.01:120,3,0	0/0:3,0:3:9.03:0,9,583	1/1:3,3:6:12.03:386,12,0	1/1:2,8:9:18.06:637,18,0	./.
chr10	12885826	.	AGC	A	30.91	PASS	AC=8;AF=0.235;AN=34;BaseQRankSum=3.783;DP=111;FS=2.500;HRun=0;HaplotypeScore=17.9758;InbreedingCoeff=0.4419;MQ=42.59;MQ0=10;MQRankSum=-0.981;QD=1.93;ReadPosRankSum=2.022;VQSLOD=0.5139;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:14:33.11:0,33,614	0/0:1,0:1:3.01:0,3,56	0/0:9,0:2:0.47:0,0,1	0/0:23,0:6:8.99:0,9,88	./.	0/0:1,0:1:3.01:0,3,56	./.	0/0:6,0:2:6.02:0,6,112	./.	0/0:3,0:2:3.01:0,3,56	./.	./.	0/0:1,0:1:3.01:0,3,48	0/0:1,0:1:3.01:0,3,56	0/0:4,1:3:9.03:0,9,164	./.	1/1:4,2:4:5.98:46,6,0	1/1:3,1:1:3:27,3,0	./.	./.	./.	1/1:0,1:1:2.98:22,3,0	0/0:2,0:2:3.01:0,3,56	1/1:3,2:3:5.96:43,6,0	0/0:3,0:2:6.02:0,6,111	./.	./.	0/0:6,0:6:15.05:0,15,275
chr10	12885833	.	T	TG	63.55	PASS	AC=10;AF=0.250;AN=40;BaseQRankSum=3.818;DP=140;FS=5.100;HRun=0;HaplotypeScore=18.3700;InbreedingCoeff=0.3853;MQ=38.77;MQ0=12;MQRankSum=-1.973;QD=1.99;ReadPosRankSum=1.641;VQSLOD=0.6503;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:13:33.11:0,33,447	0/0:2,0:2:3:0,3,28	1/1:15,0:2:0.47:1,0,0	0/0:25,0:6:5.98:0,6,46	./.	0/0:2,0:1:3:0,3,29	./.	0/0:6,0:2:6.02:0,6,83	./.	0/0:3,0:2:3.01:0,3,30	./.	0/0:3,0:3:3.01:0,3,31	0/0:1,0:1:3.01:0,3,38	0/0:1,0:1:2.99:0,3,23	0/0:8,1:5:11.98:0,12,118	./.	1/1:5,2:3:6.01:58,6,0	1/1:2,1:1:3.01:33,3,0	0/0:2,0:1:3.01:0,3,36	./.	0/0:20,0:3:3:0,3,29	1/1:0,1:1:3:28,3,0	0/0:2,0:2:3.01:0,3,30	1/1:4,2:3:6.01:55,6,0	0/0:4,0:3:6.02:0,6,84	./.	./.	0/0:6,0:6:15.01:0,15,137
chr10	12885981	.	AAAT	A	1018.19	PASS	AB=1.000;AC=37;AF=0.841;AN=44;BaseQRankSum=-3.535;DP=158;FS=34.496;HRun=0;HaplotypeScore=26.3722;InbreedingCoeff=0.2353;MQ=60.57;MQ0=8;MQRankSum=-0.873;QD=8.15;ReadPosRankSum=1.183;VQSLOD=1.3188;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:13,0:13:25.30:25,0,40	1/1:2,0:2:2.98:22,3,0	0/1:28,0:7:3.86:4,0,111	0/0:23,0:7:14.14:0,14,143	1/1:0,3:3:3.01:42,3,0	1/1:6,0:6:11.36:68,11,0	0/0:1,0:1:2.68:0,3,11	1/1:12,0:11:26.81:197,27,0	1/1:3,0:3:1.82:5,2,0	0/1:4,0:3:0:0,0,0	./.	1/1:2,1:2:3.01:47,3,0	./.	./.	1/1:6,0:6:2.98:22,3,0	1/1:3,0:3:2.98:22,3,0	1/1:4,1:4:2.97:20,3,0	./.	1/1:3,9:10:26.86:243,27,0	1/1:1,0:1:2.97:20,3,0	1/1:0,4:4:2.97:20,3,0	1/1:1,0:1:3:26,3,0	./.	./.	1/1:4,0:3:2.97:20,3,0	1/1:5,3:8:21.73:155,22,0	1/1:3,0:3:8.91:61,9,0	1/1:3,1:4:11.95:112,12,0
chr10	12885982	.	AAT	A	1205.49	PASS	AB=1.000;AC=39;AF=0.886;AN=44;BaseQRankSum=-3.945;DP=159;FS=15.561;HRun=0;HaplotypeScore=24.7901;InbreedingCoeff=0.2560;MQ=60.48;MQ0=8;MQRankSum=0.087;QD=9.80;ReadPosRankSum=-0.198;VQSLOD=1.0983;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:13:11.52:63,12,0	1/1:0,2:2:3.01:42,3,0	0/1:29,0:8:4.24:4,0,96	0/0:23,0:7:14.46:0,14,126	1/1:3,0:3:3.01:36,3,0	1/1:6,0:6:16.07:104,16,0	1/1:1,0:1:1.25:3,1,0	1/1:13,0:12:32.80:245,33,0	1/1:1,2:3:2.97:20,3,0	0/0:0,4:3:0:0,0,0	./.	1/1:2,1:2:3.01:33,3,0	./.	./.	1/1:0,6:6:3.01:42,3,0	1/1:0,3:3:3.01:42,3,0	1/1:1,4:4:2.97:20,3,0	./.	1/1:10,2:10:26.85:215,27,0	1/1:1,0:1:2.97:20,3,0	1/1:4,0:4:2.97:20,3,0	1/1:1,0:1:3.01:42,3,0	./.	./.	1/1:3,0:2:4.21:23,4,0	1/1:6,2:8:23.81:173,24,0	1/1:3,0:3:8.91:62,9,0	1/1:4,0:4:11.95:99,12,0
chr10	12885983	.	AT	A	1298.17	PASS	AB=0.984;AC=40;AF=0.909;AN=44;BaseQRankSum=-4.084;DP=161;FS=11.540;HRun=1;HaplotypeScore=23.7817;InbreedingCoeff=0.2279;MQ=63.48;MQ0=9;MQRankSum=0.628;QD=10.14;ReadPosRankSum=-0.856;VQSLOD=-0.4325;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:13:24.78:169,25,0	1/1:2,0:2:3:29,3,0	0/1:29,1:8:5.25:5,0,63	0/0:24,0:8:13.62:0,14,106	1/1:3,0:3:3:25,3,0	1/1:6,0:6:17.86:138,18,0	1/1:1,0:1:2.97:20,3,0	1/1:13,0:12:32.80:245,33,0	1/1:2,1:3:2.97:20,3,0	0/1:4,0:3:0:0,0,0	./.	1/1:3,0:2:3:27,3,0	./.	./.	1/1:6,0:6:3:28,3,0	1/1:3,0:3:3:28,3,0	1/1:5,0:4:2.97:20,3,0	./.	1/1:11,0:9:26.84:202,27,0	1/1:1,0:1:2.97:20,3,0	1/1:4,0:4:2.97:20,3,0	1/1:0,1:1:3:29,3,0	./.	./.	1/1:3,0:2:5.93:40,6,0	1/1:9,0:9:26.18:182,26,0	1/1:3,0:3:8.92:62,9,0	1/1:4,0:4:11.94:92,12,0
chr10	12886063	.	AGGGTGTTCG	A	7057.06	PASS	AC=38;AF=0.704;AN=54;BaseQRankSum=10.757;DP=255;FS=128.734;HRun=0;HaplotypeScore=77.4377;InbreedingCoeff=0.8160;MQ=73.21;MQ0=0;MQRankSum=-10.521;QD=63.01;ReadPosRankSum=4.098;VQSLOD=1.9533;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:78.27:0,78,3879	./.	0/0:12,0:11:33.11:0,33,1672	0/0:13,0:13:39.11:0,39,1680	1/1:0,3:1:3.01:98,3,0	1/1:0,12:12:21.07:684,21,0	1/1:0,9:8:21.07:684,21,0	0/0:30,0:30:90.28:0,90,4023	1/1:0,9:8:21.07:684,21,0	1/1:0,4:4:12.01:236,12,0	1/1:0,6:6:18.06:544,18,0	1/1:0,4:4:12.04:390,12,0	1/1:0,5:3:6.02:196,6,0	1/1:0,5:5:9.03:293,9,0	1/1:0,4:3:6.02:196,6,0	1/1:0,10:10:24.08:782,24,0	1/1:0,8:8:9.03:293,9,0	1/1:0,5:5:9.03:293,9,0	0/0:19,0:19:57.20:0,57,2766	0/0:16,0:16:45.10:0,45,2073	0/0:23,0:23:69.23:0,69,3301	1/1:0,2:1:3.01:98,3,0	1/1:1,4:5:11.89:314,12,0	1/1:0,9:9:9.03:293,9,0	0/0:4,0:4:12.04:0,12,598	1/1:0,5:5:12.04:391,12,0	1/1:0,6:6:15.05:489,15,0	1/1:0,1:1:3.01:98,3,0
chr10	12886186	.	C	CT	4248.15	PASS	AB=1.000;AC=41;AF=0.732;AN=56;BaseQRankSum=-2.620;DP=396;FS=2.231;HRun=4;HaplotypeScore=50.3505;InbreedingCoeff=0.8021;MQ=68.32;MQ0=3;MQRankSum=-1.530;QD=16.53;ReadPosRankSum=1.151;VQSLOD=3.9744;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:50.60:0,51,466	1/1:0,9:9:20.93:226,21,0	0/0:33,0:17:17.61:0,18,222	0/1:9,0:5:7.20:7,0,38	1/1:6,6:12:22.59:149,23,0	1/1:7,5:12:28.08:286,28,0	1/1:3,19:21:33.03:398,33,0	0/0:26,0:26:59.97:0,60,546	1/1:7,14:21:0.03:78,0,0	1/1:4,3:7:15.01:162,15,0	1/1:5,7:12:29.90:312,30,0	1/1:2,11:13:19.89:243,20,0	1/1:4,2:4:9.91:118,10,0	1/1:2,5:7:3.01:41,3,0	1/1:3,8:10:16.29:183,16,0	1/1:3,12:15:23.26:282,23,0	1/1:4,10:14:22.62:283,23,0	1/1:9,3:12:25.04:218,25,0	0/0:20,0:20:51.74:0,52,396	0/0:9,0:9:23.97:0,24,203	0/0:17,0:18:41.92:0,42,348	1/1:3,3:6:14.59:148,15,0	1/1:3,1:4:3.48:43,3,0	1/1:5,12:17:25.90:251,26,0	0/0:8,0:8:24.01:0,24,239	1/1:2,17:19:48.08:505,48,0	1/1:2,8:10:15.03:179,15,0	1/1:3,16:19:12.76:136,13,0
chr10	12886188	.	TA	T	352.58	PASS	AB=0.667;AC=8;AF=0.143;AN=56;BaseQRankSum=-6.337;DP=396;FS=0.000;HRun=16;HaplotypeScore=61.0975;InbreedingCoeff=0.5144;MQ=68.35;MQ0=3;MQRankSum=1.401;QD=4.25;ReadPosRankSum=-0.136;VQSLOD=0.5716;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:29.38:0,29,297	0/0:9,0:9:14.65:0,15,89	0/0:30,1:17:17.02:0,17,135	0/0:9,0:5:5.66:0,6,45	0/0:12,0:12:13.54:0,14,79	0/0:12,0:12:26.81:0,27,155	0/0:20,0:21:32.04:0,32,185	0/1:13,12:26:46.77:142,0,47	0/0:21,0:21:26.41:0,26,175	0/0:6,0:7:5.61:0,6,75	0/0:14,0:14:26.35:0,26,160	0/0:12,0:12:23.14:0,23,127	0/0:7,0:6:15.81:0,16,89	0/0:6,0:6:5.90:0,6,40	0/0:10,0:11:17.36:0,17,96	0/0:14,0:14:32.17:0,32,198	0/0:13,0:14:26.24:0,26,155	0/0:13,0:13:26.29:0,26,155	1/1:6,12:21:32.87:180,33,0	1/1:5,2:9:9.16:46,9,0	1/1:10,9:19:4.12:91,4,0	0/0:6,0:6:11.67:0,12,66	0/0:3,0:3:2.90:0,3,16	0/0:16,0:16:26.22:0,26,151	0/1:4,4:8:33.05:33,0,80	0/0:20,0:20:43.11:0,43,249	0/0:8,0:9:14.50:0,14,83	0/0:19,0:19:17.49:0,17,102
chr10	12886294	.	ATT	A	1701.34	PASS	AB=0.592;AC=35;AF=0.648;AN=54;BaseQRankSum=0.401;DP=294;FS=13.856;HRun=11;HaplotypeScore=54.0917;InbreedingCoeff=0.6438;MQ=71.38;MQ0=5;MQRankSum=-0.790;QD=9.72;ReadPosRankSum=5.617;VQSLOD=0.1251;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:26:60.07:0,60,802	./.	0/0:18,0:8:21.47:0,21,215	0/0:19,0:11:21.22:0,21,146	1/1:3,2:6:5.68:31,6,0	1/1:7,0:11:17.67:132,18,0	0/1:2,0:8:4.13:36,0,4	0/0:9,0:10:21.06:0,21,268	1/1:3,4:8:12.86:110,13,0	1/1:6,3:9:17.53:138,18,0	1/1:3,3:6:6:64,6,0	1/1:0,4:4:6.02:64,6,0	1/1:1,1:3:5.95:50,6,0	1/1:4,6:11:17.76:171,18,0	1/1:3,6:10:17.72:159,18,0	1/1:1,2:3:3:32,3,0	1/1:5,10:16:18.83:164,19,0	0/1:5,12:18:4.35:253,0,4	0/0:14,0:22:57.11:0,57,646	0/0:3,0:6:18.03:0,18,183	0/0:7,0:8:13.59:0,14,143	1/1:8,3:9:6.44:57,6,0	1/1:2,3:5:2.98:32,3,0	1/1:3,10:13:18.04:191,18,0	0/0:9,0:8:21.06:0,21,295	0/1:4,0:10:9.29:66,0,9	1/1:6,7:13:11.71:96,12,0	1/1:5,0:5:5.92:48,6,0
chr10	12886996	.	G	GTTT	5204.05	PASS	AB=0.989;AC=44;AF=0.786;AN=56;BaseQRankSum=-3.137;DP=372;FS=2.673;HRun=8;HaplotypeScore=94.7040;InbreedingCoeff=0.5045;MQ=78.89;MQ0=4;MQRankSum=-3.311;QD=16.73;ReadPosRankSum=-1.502;VQSLOD=1.7960;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:24.03:0,24,297	1/1:6,0:6:8.77:58,9,0	0/1:35,0:17:17.15:17,0,161	0/0:29,0:17:11.54:0,12,85	1/1:12,0:11:26.93:283,27,0	1/1:2,0:6:5.38:42,5,0	1/1:7,0:22:17.97:167,18,0	0/1:20,0:21:13.51:14,0,45	1/1:11,2:13:32.99:422,33,0	1/1:4,0:4:9.01:132,9,0	1/1:7,0:7:20.98:296,21,0	1/1:14,0:14:26.12:287,26,0	1/1:6,1:7:14.93:200,15,0	1/1:9,2:11:29.93:382,30,0	1/1:14,1:16:26.92:358,27,0	1/1:8,0:8:23.97:291,24,0	1/1:20,1:21:43.23:477,43,0	1/1:10,1:11:18.02:257,18,0	0/1:15,0:15:23.99:24,0,47	0/0:16,0:16:25.10:0,25,97	0/1:20,0:20:2.82:3,0,42	1/1:9,0:8:18.78:190,19,0	1/1:4,1:7:14.90:169,15,0	1/1:18,0:18:43.49:367,43,0	0/0:3,0:3:2.99:0,3,39	1/1:9,5:14:33.04:497,33,0	1/1:10,1:10:17.93:212,18,0	1/1:1,0:1:3.01:60,3,0
chr10	12887004	.	TGGG	T	2562.04	PASS	AB=0.990;AC=41;AF=0.732;AN=56;BaseQRankSum=-3.437;DP=369;FS=8.022;HRun=12;HaplotypeScore=98.8190;InbreedingCoeff=0.3354;MQ=87.43;MQ0=6;MQRankSum=0.678;QD=7.74;ReadPosRankSum=2.402;VQSLOD=-0.1241;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:12.04:0,12,224	1/1:2,1:4:5.53:51,6,0	0/1:56,2:32:9.80:10,0,633	0/1:37,0:21:1.96:2,0,245	1/1:9,1:10:11.12:91,11,0	0/0:3,0:3:3.89:0,4,37	0/0:19,0:19:21.03:0,21,321	1/1:8,8:16:33.06:387,33,0	1/1:12,0:12:10.49:89,10,0	1/1:6,1:7:12.04:151,12,0	1/1:8,1:9:4.94:70,5,0	1/1:13,0:13:6.27:122,6,0	1/1:6,0:6:1.17:27,1,0	1/1:9,1:11:4.22:77,4,0	1/1:11,1:12:9.60:87,10,0	0/1:8,0:8:7.23:25,0,7	1/1:18,0:18:3.97:91,4,0	1/1:9,0:9:4.48:28,4,0	1/1:6,6:13:27.06:338,27,0	1/1:5,11:16:33.08:404,33,0	1/1:5,11:16:24.06:303,24,0	1/1:7,2:9:17.77:162,18,0	1/1:6,0:6:3.08:25,3,0	0/1:16,0:16:22.71:23,0,68	0/0:2,0:2:3.01:0,3,59	0/1:13,0:12:1.19:16,0,1	1/1:8,1:9:12.48:138,12,0	0/0:1,0:1:0:0,0,0
chr10	12887014	.	GGGT	G	818.65	PASS	AB=0.991;AC=21;AF=0.389;AN=54;BaseQRankSum=-0.853;DP=328;FS=29.908;HRun=0;HaplotypeScore=97.8512;InbreedingCoeff=-0.1778;MQ=87.74;MQ0=6;MQRankSum=-1.205;QD=4.45;ReadPosRankSum=4.169;VQSLOD=-0.2796;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:6:15:0,15,234	0/1:5,0:5:6.31:6,0,48	0/0:58,0:31:11.35:0,11,591	0/0:35,0:21:13.32:0,13,336	0/1:10,0:9:19.25:34,0,19	0/0:2,0:2:2.88:0,3,15	0/0:17,0:17:18.06:0,18,351	0/1:13,0:13:13.38:115,0,13	0/1:10,1:11:62.35:86,0,62	0/1:7,0:7:30.80:31,0,47	0/1:6,0:6:4.66:5,0,62	0/1:15,0:15:58.07:58,0,106	0/1:5,0:5:2.07:2,0,61	0/1:7,0:7:20.83:21,0,63	0/1:10,0:10:19.72:20,0,39	0/0:7,0:7:5.30:0,5,59	0/1:17,0:17:12.77:13,0,68	0/1:8,0:8:21.59:35,0,22	1/1:8,2:10:25.54:160,26,0	1/1:12,1:13:15.22:213,15,0	0/1:14,0:14:9.89:79,0,10	1/1:8,0:7:1.67:47,2,0	0/0:7,0:7:14.45:0,14,89	0/1:15,1:16:4.31:4,0,244	0/0:4,0:4:12.01:0,12,154	0/0:8,0:7:14.37:0,14,71	0/1:9,0:9:48.07:48,0,51	./.
chr10	12887160	.	CT	C	10402.59	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=11.912;DP=466;FS=13.327;HRun=1;HaplotypeScore=49.7433;InbreedingCoeff=0.9908;MQ=91.37;MQ0=0;MQRankSum=-4.504;QD=37.29;ReadPosRankSum=5.202;VQSLOD=3.6991;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,129,2034	1/1:0,6:6:11.84:167,12,0	0/0:18,0:17:48.04:0,48,693	0/0:23,0:23:62.92:0,63,900	1/1:0,18:18:51.17:707,51,0	1/1:0,7:7:21.07:293,21,0	1/1:0,16:16:45.15:629,45,0	0/0:20,0:20:51.17:0,51,795	1/1:0,14:14:33.11:455,33,0	1/1:0,19:19:57.19:792,57,0	1/1:0,10:10:30.10:418,30,0	1/1:0,10:10:27.09:376,27,0	1/1:0,7:7:21.07:293,21,0	1/1:0,11:11:24.08:335,24,0	1/1:0,15:15:30.10:406,30,0	1/1:0,12:12:30.10:418,30,0	1/1:0,37:37:99:1509,108,0	1/1:0,14:14:36.12:501,36,0	0/0:21,0:21:63.21:0,63,987	0/0:24,0:24:72.25:0,72,1150	0/0:24,0:24:72.25:0,72,1145	1/1:0,9:9:27.09:376,27,0	1/1:0,8:8:17.89:251,18,0	1/1:0,19:19:51.17:713,51,0	0/0:13,0:13:39.13:0,39,623	1/1:0,22:21:63.18:841,63,0	1/1:0,15:15:36.12:502,36,0	1/1:0,10:10:30.10:419,30,0
chr10	12887293	.	G	GTTT	9227.25	PASS	AB=1.000;AC=44;AF=0.786;AN=56;BaseQRankSum=-4.958;DP=475;FS=0.000;HRun=8;HaplotypeScore=73.3894;InbreedingCoeff=0.7369;MQ=74.26;MQ0=7;MQRankSum=-3.038;QD=27.14;ReadPosRankSum=-0.566;VQSLOD=2.5622;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:39:87.04:0,87,1106	1/1:0,2:3:6.02:121,6,0	0/0:55,0:29:57.03:0,57,673	0/1:42,0:21:2.43:2,0,229	1/1:3,15:18:42.01:695,42,0	0/0:13,0:13:39.12:0,39,500	0/0:16,0:16:42.09:0,42,536	0/1:17,0:16:52.28:52,0,64	1/1:2,10:12:27.09:525,27,0	1/1:5,11:18:32.81:632,33,0	1/1:1,11:13:30.10:575,30,0	1/1:3,8:13:21.07:412,21,0	1/1:0,5:6:9.03:168,9,0	1/1:2,9:12:21.07:419,21,0	1/1:5,13:18:33.07:626,33,0	1/1:6,12:19:18.06:355,18,0	1/1:0,17:21:48.16:915,48,0	1/1:6,15:23:39.13:769,39,0	1/1:11,0:10:5.05:63,5,0	1/1:8,0:8:4.60:47,5,0	1/1:12,0:12:16.59:50,17,0	1/1:1,6:11:30.08:501,30,0	1/1:1,6:8:21.07:359,21,0	1/1:1,5:6:12.04:242,12,0	0/0:8,0:8:24.08:0,24,313	1/1:2,15:18:42.14:775,42,0	1/1:3,15:22:42.13:740,42,0	1/1:0,3:4:9.03:182,9,0
chr10	12887301	.	T	TTG	2141.71	PASS	AB=0.966;AC=31;AF=0.554;AN=56;BaseQRankSum=5.606;DP=473;FS=4.194;HRun=0;HaplotypeScore=85.7240;InbreedingCoeff=0.0749;MQ=69.43;MQ0=11;MQRankSum=-0.593;QD=7.41;ReadPosRankSum=3.364;VQSLOD=3.1831;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:33:74.49:0,74,1066	1/1:3,0:3:5.25:23,5,0	0/0:63,0:30:47.02:0,47,392	0/0:43,0:18:3.21:0,3,201	1/1:14,0:13:2.07:53,2,0	0/0:14,0:14:36.14:0,36,515	0/0:17,0:17:48.11:0,48,652	0/1:4,13:18:3.94:468,0,4	1/1:11,0:10:15.06:66,15,0	0/1:21,0:21:55.59:56,0,82	0/1:13,0:13:0.55:66,0,1	0/1:13,0:13:21.01:21,0,51	0/1:7,0:7:13.04:27,0,13	0/1:12,0:12:4.78:55,0,5	0/1:17,0:16:16.61:30,0,17	1/1:13,0:13:1.56:47,2,0	1/1:20,0:20:7.40:61,7,0	0/1:21,0:21:35.96:49,0,36	1/1:2,11:13:35.98:426,36,0	1/1:1,7:9:17.90:194,18,0	1/1:0,13:14:22.32:396,22,0	0/1:11,0:10:2.82:52,0,3	0/1:10,0:10:24.46:24,0,31	0/1:5,0:5:4.12:4,0,15	0/0:10,0:10:23.96:0,24,319	0/1:18,0:17:14.29:113,0,14	0/1:18,0:18:3.52:78,0,4	1/1:6,0:6:1.83:4,2,0
chr10	12887833	.	AG	A	2638.57	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=0.397;DP=483;FS=22.956;HRun=3;HaplotypeScore=57.9376;InbreedingCoeff=0.9488;MQ=77.75;MQ0=0;MQRankSum=4.226;QD=33.40;ReadPosRankSum=-3.585;VQSLOD=1.0358;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,108,1512	0/0:1,0:1:3.01:0,3,43	0/0:17,0:16:48.15:0,48,653	0/0:21,0:20:43.13:0,43,674	0/0:21,0:21:63.21:0,63,903	0/0:21,0:21:60.19:0,60,845	0/0:14,0:14:42.14:0,42,604	1/1:1,34:35:99:1239,102,0	0/0:14,0:14:42.14:0,42,604	0/0:21,0:21:60.20:0,60,855	0/0:15,0:15:45.15:0,45,647	0/0:7,0:7:21.07:0,21,301	0/0:13,0:13:39.13:0,39,560	0/0:20,0:20:60.20:0,60,863	0/0:10,0:10:30.10:0,30,431	0/0:16,0:16:48.16:0,48,690	0/0:13,0:12:36.12:0,36,518	0/0:22,0:22:63.19:0,63,871	1/1:1,22:23:66.21:817,66,0	1/1:0,15:15:42.13:518,42,0	1/1:0,6:6:18.06:223,18,0	0/0:20,0:20:54.18:0,54,775	0/0:10,0:10:30.10:0,30,431	0/0:8,0:8:24.08:0,24,345	0/0:20,0:20:60.19:0,60,846	0/0:22,0:22:63.21:0,63,905	0/0:18,0:18:54.14:0,54,754	0/0:17,0:17:48.16:0,48,691
chr10	12888246	.	TA	T	6386.39	PASS	AB=0.744;AC=40;AF=0.714;AN=56;BaseQRankSum=9.013;DP=512;FS=4.270;HRun=11;HaplotypeScore=51.4079;InbreedingCoeff=0.8114;MQ=58.87;MQ0=7;MQRankSum=0.864;QD=17.89;ReadPosRankSum=2.275;VQSLOD=5.9441;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:39:99:0,105,1112	1/1:3,5:8:11.98:99,12,0	0/1:8,1:6:15.63:16,0,68	0/0:8,0:3:8.38:0,8,70	1/1:2,22:24:62.27:501,62,0	1/1:1,20:21:53.93:443,54,0	1/1:1,13:13:29.94:246,30,0	0/0:31,0:23:57.10:0,57,586	1/1:1,6:9:16.06:110,16,0	1/1:2,20:21:50.92:419,51,0	1/1:2,26:29:67.94:547,68,0	1/1:2,11:13:26.97:222,27,0	1/1:1,13:13:32.96:271,33,0	1/1:1,8:9:20.97:171,21,0	1/1:4,13:17:35.94:295,36,0	0/1:3,7:10:11.01:127,0,11	1/1:3,16:19:29.03:372,29,0	1/1:0,21:21:44.95:369,45,0	0/0:22,0:20:42.11:0,42,448	0/0:30,0:30:75.16:0,75,778	0/0:7,0:7:21.05:0,21,224	1/1:1,6:7:17.98:148,18,0	1/1:2,14:16:35.95:296,36,0	1/1:1,12:12:26.97:222,27,0	0/0:15,0:15:45.11:0,45,480	1/1:7,30:35:92.76:747,93,0	1/1:1,20:21:55.98:449,56,0	1/1:9,13:22:38.85:317,39,0
chr10	12888705	.	TTTTGTTTG	T	11552.63	PASS	AB=1.000;AC=41;AF=0.732;AN=56;BaseQRankSum=3.608;DP=544;FS=2.231;HRun=0;HaplotypeScore=152.2834;InbreedingCoeff=0.9034;MQ=61.31;MQ0=3;MQRankSum=-9.119;QD=30.89;ReadPosRankSum=2.580;VQSLOD=4.4370;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:76.49:0,76,2847	1/1:1,3:4:2.89:76,3,0	0/0:29,0:19:9.02:0,9,134	0/1:21,0:17:0:0,0,0	1/1:9,14:23:29.78:382,30,0	1/1:3,9:12:24.04:553,24,0	1/1:7,15:22:30.10:761,30,0	0/0:28,0:26:36.12:0,36,1074	1/1:4,13:17:36.12:913,36,0	1/1:16,22:38:66.18:1504,66,0	1/1:5,7:12:15.01:324,15,0	1/1:5,7:11:17.98:345,18,0	1/1:4,5:9:9.03:190,9,0	1/1:5,11:16:24.08:609,24,0	1/1:7,14:21:30.10:761,30,0	1/1:0,12:12:27.09:649,27,0	1/1:15,16:31:15.05:380,15,0	1/1:3,9:12:15.52:382,16,0	0/0:13,0:19:27.08:0,27,853	0/0:10,0:22:45.05:0,45,1285	0/0:4,0:16:33.11:0,33,1151	1/1:5,15:20:32.94:612,33,0	1/1:5,18:23:35.90:745,36,0	1/1:6,10:15:24.08:609,24,0	0/0:15,0:16:30.09:0,30,1113	1/1:8,10:18:27.03:541,27,0	1/1:8,15:23:36.12:913,36,0	1/1:5,5:10:12.04:304,12,0
chr10	12888931	.	GGGTCTCTGTGAATTCAAGGCCAGCCT	G	1351.11	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=5.340;DP=571;FS=27.417;HRun=0;HaplotypeScore=341.6055;InbreedingCoeff=0.8263;MQ=51.20;MQ0=10;MQRankSum=-2.032;QD=21.11;ReadPosRankSum=0.050;VQSLOD=0.9287;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:47:93.32:0,93,9499	0/0:6,0:6:12.04:0,12,694	0/0:16,0:7:18.06:0,18,978	0/0:20,0:14:42.06:0,42,1989	0/0:14,0:13:15.05:0,15,1158	0/0:20,0:20:39.13:0,39,3508	0/0:23,0:23:66.21:0,66,6234	1/1:15,2:16:6.02:341,6,0	0/0:27,0:27:78.27:0,78,8324	0/0:28,0:27:42.14:0,42,3850	0/0:13,0:13:23.96:0,24,1811	0/0:21,0:21:57.20:0,57,5486	0/0:11,0:10:27.09:0,27,2498	0/0:21,0:21:54.19:0,54,5552	0/0:26,0:26:66.23:0,66,6838	0/0:22,0:22:66.18:0,66,6708	0/0:29,0:29:87.30:0,87,9156	0/0:19,0:19:48.16:0,48,4847	1/1:8,6:13:18.04:739,18,0	1/1:11,1:11:3.01:209,3,0	1/1:15,6:21:3.01:195,3,0	0/0:18,0:18:24.55:0,25,2364	0/0:16,0:16:9.03:0,9,828	0/0:26,0:26:66.18:0,66,5984	0/0:20,0:20:42.14:0,42,3071	0/0:17,0:17:33.11:0,33,3057	0/0:33,0:33:87.30:0,87,7473	0/0:13,0:13:33.11:0,33,2603
chr10	12889273	.	G	GGTGCACGTGTGTATG	1910.60	PASS	AB=0.708;AC=24;AF=0.923;AN=26;BaseQRankSum=-2.793;DP=32;FS=3.203;HRun=0;HaplotypeScore=20.5850;InbreedingCoeff=-0.2471;MQ=159.79;MQ0=0;MQRankSum=-1.833;QD=68.24;ReadPosRankSum=-1.222;VQSLOD=2.7707;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,0:2:3.01:67,3,0	./.	0/1:4,0:6:9.60:596,0,10	0/1:3,1:6:21:536,0,21	1/1:1,0:1:3.01:102,3,0	./.	1/1:1,0:1:2.97:20,3,0	1/1:2,0:2:6.01:133,6,0	./.	./.	1/1:1,0:1:3.01:50,3,0	./.	./.	./.	./.	1/1:1,0:1:3.01:69,3,0	./.	./.	1/1:2,0:2:3.01:47,3,0	./.	1/1:1,0:1:3:25,3,0	1/1:1,0:1:3.01:50,3,0	./.	./.	1/1:1,0:1:3.01:120,3,0	1/1:3,0:3:9.01:181,9,0	./.	./.
chr10	12889398	.	CTG	C	11691.99	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=2.774;DP=481;FS=4.490;HRun=0;HaplotypeScore=77.8299;InbreedingCoeff=0.9924;MQ=60.37;MQ0=3;MQRankSum=-3.652;QD=30.45;ReadPosRankSum=5.831;VQSLOD=6.3020;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,1:24:30.62:0,31,1029	1/1:0,10:10:24.08:308,24,0	0/0:25,0:19:54.04:0,54,842	0/0:30,0:27:63.21:0,63,996	1/1:3,17:20:45.15:579,45,0	1/1:0,11:11:33.11:424,33,0	1/1:1,8:9:21.07:270,21,0	1/1:4,6:9:18.06:231,18,0	1/1:2,12:14:30.10:386,30,0	1/1:2,18:20:54.17:683,54,0	1/1:1,9:10:27.09:347,27,0	1/1:4,25:29:69.22:888,69,0	1/1:0,8:9:21.07:265,21,0	1/1:1,15:16:48.16:617,48,0	1/1:2,12:14:33.11:424,33,0	1/1:2,17:18:48.16:617,48,0	1/1:0,15:15:33.11:425,33,0	1/1:1,21:22:51.17:653,51,0	1/1:4,9:13:27.07:332,27,0	1/1:2,14:16:36.12:463,36,0	1/1:0,29:29:68.99:887,69,0	1/1:3,17:20:48.16:617,48,0	1/1:0,13:13:27.09:347,27,0	1/1:0,20:20:42.14:541,42,0	0/0:18,0:18:51.17:0,51,853	1/1:4,19:22:51.16:655,51,0	1/1:1,12:13:36.12:463,36,0	1/1:1,8:8:21.07:270,21,0
chr10	12890917	.	ATT	A	17854.45	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=14.459;DP=658;FS=0.000;HRun=4;HaplotypeScore=112.7649;InbreedingCoeff=0.9999;MQ=85.85;MQ0=1;MQRankSum=-4.006;QD=40.39;ReadPosRankSum=7.681;VQSLOD=3.1684;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,129,2417	1/1:1,10:11:30.10:442,30,0	0/0:18,0:18:48.15:0,48,808	0/0:24,0:24:58.99:0,59,920	1/1:1,22:23:60.20:883,60,0	1/1:0,19:19:57.19:839,57,0	1/1:0,22:22:57.19:840,57,0	0/0:30,0:30:87.30:0,87,1625	1/1:0,30:30:90.30:1319,90,0	1/1:1,31:32:93.29:1342,93,0	1/1:2,26:28:60.20:884,60,0	1/1:0,23:23:66.22:971,66,0	1/1:1,16:17:48.16:707,48,0	1/1:1,13:14:36.12:530,36,0	1/1:1,33:34:96.32:1414,96,0	1/1:3,14:17:42.14:619,42,0	1/1:1,30:31:87.29:1281,87,0	1/1:1,19:21:63.04:891,63,0	0/0:19,0:19:57.20:0,57,1063	0/0:28,0:28:81.28:0,81,1518	0/0:36,0:36:99:0,102,1904	1/1:1,25:26:75.25:1093,75,0	1/1:1,13:14:39.13:574,39,0	1/1:1,25:25:69.23:1016,69,0	0/0:17,0:17:51.17:0,51,926	1/1:1,18:19:51.17:751,51,0	1/1:0,22:22:63.21:928,63,0	1/1:1,12:13:36.12:530,36,0
chr10	12891315	.	AATG	A	17668.59	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=15.478;DP=649;FS=0.000;HRun=0;HaplotypeScore=109.3217;InbreedingCoeff=0.9995;MQ=88.47;MQ0=0;MQRankSum=-5.503;QD=42.27;ReadPosRankSum=6.968;VQSLOD=5.8129;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:43:99:0,129,2890	1/1:1,8:9:24.08:400,24,0	0/0:19,0:19:48.07:0,48,1061	0/0:33,0:33:87.30:0,87,1864	1/1:0,21:21:60.20:988,60,0	1/1:1,26:27:66.23:1099,66,0	1/1:1,31:32:78.27:1299,78,0	0/0:35,0:35:93.31:0,93,2054	1/1:0,24:24:65.77:1099,66,0	1/1:1,17:18:51.17:847,51,0	1/1:1,16:17:48.16:787,48,0	1/1:0,27:27:75.26:1249,75,0	1/1:0,17:17:51.17:849,51,0	1/1:0,22:22:60.21:999,60,0	1/1:0,19:19:45.15:749,45,0	1/1:1,19:20:51.13:819,51,0	1/1:1,19:20:54.18:899,54,0	1/1:0,19:19:42.14:700,42,0	0/0:29,0:29:84.27:0,84,1767	0/0:19,0:19:54.19:0,54,1223	0/0:36,0:36:99:0,105,2342	1/1:0,13:13:39.13:638,39,0	1/1:0,12:12:33.11:550,33,0	1/1:2,26:28:57.19:949,57,0	0/0:16,0:16:42.14:0,42,951	1/1:3,21:24:63.22:1049,63,0	1/1:3,31:34:72.25:1199,72,0	1/1:2,13:15:30.10:500,30,0
chr10	12891522	.	A	AT	6883.96	PASS	AB=0.538;AC=47;AF=0.839;AN=56;BaseQRankSum=-6.515;DP=504;FS=4.284;HRun=12;HaplotypeScore=53.3262;InbreedingCoeff=0.7683;MQ=64.11;MQ0=14;MQRankSum=-0.414;QD=16.96;ReadPosRankSum=2.558;VQSLOD=6.1314;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:76.50:0,77,551	1/1:4,8:12:5.06:197,5,0	0/0:23,0:10:10.32:0,10,62	0/0:24,0:9:4.44:0,4,45	1/1:8,21:29:10.23:414,10,0	1/1:2,21:23:51.08:496,51,0	1/1:0,7:7:15.02:146,15,0	1/1:9,24:33:52.99:647,53,0	1/1:3,11:14:33.05:321,33,0	1/1:4,11:17:10.81:235,11,0	1/1:2,7:10:20.95:192,21,0	1/1:2,7:9:18.03:175,18,0	1/1:4,13:18:29.96:273,30,0	0/1:1,6:7:3.93:116,0,4	1/1:4,11:15:20.87:204,21,0	1/1:4,6:11:23.71:204,24,0	1/1:5,17:20:29.88:277,30,0	1/1:6,21:26:36.06:350,36,0	1/1:11,14:26:28.95:409,29,0	1/1:4,12:16:39.05:373,39,0	1/1:3,5:6:12.02:117,12,0	1/1:0,5:5:15.02:146,15,0	1/1:6,11:17:9.72:178,10,0	1/1:1,6:7:18.03:174,18,0	0/0:16,0:16:41.76:0,42,306	1/1:7,28:32:59.14:718,59,0	1/1:7,16:22:20.11:348,20,0	1/1:3,6:9:18.03:175,18,0
chr10	12891927	.	AG	A	12791.70	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=7.846;DP=609;FS=1.491;HRun=5;HaplotypeScore=64.0017;InbreedingCoeff=0.9996;MQ=74.14;MQ0=0;MQRankSum=0.303;QD=29.82;ReadPosRankSum=4.052;VQSLOD=5.3523;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:87.28:0,87,1173	1/1:0,9:9:24.07:271,24,0	0/0:16,0:16:41.92:0,42,520	0/0:28,0:28:59.94:0,60,888	1/1:2,25:27:71.98:779,72,0	1/1:0,16:16:48.14:544,48,0	1/1:0,29:29:72.21:816,72,0	0/0:24,0:24:66.20:0,66,875	1/1:0,18:18:48.14:544,48,0	1/1:1,20:21:60.14:661,60,0	1/1:1,18:19:51.10:563,51,0	1/1:2,22:24:60.17:681,60,0	1/1:0,20:20:54.15:612,54,0	1/1:1,17:18:48.14:544,48,0	1/1:0,28:28:69.20:783,69,0	1/1:2,17:19:48.14:544,48,0	1/1:0,32:32:84.24:952,84,0	1/1:2,13:15:39.11:442,39,0	0/0:23,0:23:66.16:0,66,853	0/0:18,0:17:45.15:0,45,614	0/0:25,0:25:75.25:0,75,1017	1/1:0,20:20:60.13:665,60,0	1/1:0,17:17:51.15:578,51,0	1/1:1,28:29:75.21:850,75,0	0/0:17,0:17:42.14:0,42,570	1/1:0,21:21:60.15:670,60,0	1/1:1,31:32:72.21:816,72,0	1/1:0,15:15:42.12:476,42,0
chr10	12892088	.	CT	C	6063.26	PASS	AB=0.677;AC=42;AF=0.750;AN=56;BaseQRankSum=4.325;DP=563;FS=8.454;HRun=12;HaplotypeScore=72.1941;InbreedingCoeff=0.5648;MQ=67.58;MQ0=5;MQRankSum=-1.104;QD=13.91;ReadPosRankSum=3.104;VQSLOD=5.1307;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:32:86.92:0,87,836	1/1:1,10:11:26.90:209,27,0	0/0:38,3:13:8.92:0,9,50	0/1:44,1:21:16.99:17,0,94	0/1:6,17:25:5.47:303,0,5	0/0:21,0:22:52.17:0,52,498	0/0:13,0:13:33.04:0,33,326	1/1:7,11:17:2.02:219,2,0	1/1:3,11:16:39.92:290,40,0	1/1:8,18:26:29.31:411,29,0	1/1:5,5:10:16.82:126,17,0	1/1:6,10:16:26.84:209,27,0	1/1:5,10:15:32.86:253,33,0	1/1:7,10:17:26.83:201,27,0	1/1:3,14:17:35.86:278,36,0	1/1:7,10:17:5.41:224,5,0	1/1:8,27:36:89.13:676,89,0	0/1:5,13:18:39.51:214,0,40	1/1:9,17:26:56.47:441,56,0	1/1:5,11:18:29.47:290,29,0	0/1:3,6:9:12.51:98,0,13	1/1:6,14:20:32.80:252,33,0	1/1:5,12:17:41.81:322,42,0	1/1:1,10:11:32.87:255,33,0	0/0:15,0:16:21.60:0,22,366	1/1:4,17:21:49.81:377,50,0	1/1:1,17:19:46.86:354,47,0	1/1:3,3:6:5.97:46,6,0
chr10	12892113	.	C	CT	1241.28	PASS	AC=8;AF=0.148;AN=54;BaseQRankSum=-3.862;DP=587;FS=16.415;HRun=8;HaplotypeScore=88.2210;InbreedingCoeff=0.9400;MQ=52.98;MQ0=13;MQRankSum=-5.085;QD=16.55;ReadPosRankSum=-3.991;VQSLOD=1.6202;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,101,884	0/0:7,0:7:12:0,12,110	0/0:53,0:9:4.70:0,5,36	0/0:42,0:14:15.25:0,15,107	0/0:28,0:28:68.06:0,68,608	0/0:16,0:16:35.95:0,36,320	0/0:16,0:16:42.01:0,42,384	1/1:12,11:23:50.74:529,51,0	0/0:19,0:19:42.01:0,42,383	0/0:22,0:22:57.02:0,57,520	0/0:12,0:12:20.62:0,21,192	0/0:15,0:15:35.98:0,36,319	0/0:17,0:17:38.86:0,39,326	0/0:13,0:12:29.94:0,30,259	0/0:12,0:12:24.01:0,24,219	0/0:16,0:16:44.24:0,44,388	0/0:41,0:41:99:0,113,1005	0/0:19,0:19:57.03:0,57,519	1/1:14,12:24:51.06:542,51,0	1/1:10,7:17:22.84:188,23,0	1/1:4,4:8:12.03:138,12,0	0/0:17,0:17:39.47:0,39,351	0/0:18,0:18:29.83:0,30,266	0/0:18,0:18:53.92:0,54,476	0/0:20,0:20:45.88:0,46,406	0/0:24,0:22:51.02:0,51,466	0/0:25,0:24:60.03:0,60,548	./.
chr10	12892310	.	A	AGCACTCCGGAG	40462.28	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=2.692;DP=548;FS=20.988;HRun=0;HaplotypeScore=187.6602;InbreedingCoeff=0.9918;MQ=57.37;MQ0=1;MQRankSum=-16.744;QD=114.95;ReadPosRankSum=-0.917;VQSLOD=3.4884;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,111,3761	1/1:4,7:11:33.07:1553,33,0	0/0:9,0:9:23.95:0,24,650	0/0:27,0:24:57.17:0,57,1788	1/1:14,7:21:17.84:904,18,0	1/1:12,4:16:36.08:1484,36,0	1/1:14,9:22:63.22:3072,63,0	0/0:17,0:17:51.17:0,51,1478	1/1:10,15:23:66.18:3080,66,0	1/1:13,8:21:54.18:2611,54,0	1/1:9,5:14:24.07:1201,24,0	1/1:5,6:15:33.10:1460,33,0	1/1:10,10:19:48.16:2312,48,0	1/1:6,10:16:39.13:2100,39,0	1/1:10,9:19:57.18:2526,57,0	1/1:7,11:18:54.19:2984,54,0	1/1:9,9:17:36.12:1926,36,0	1/1:7,2:9:21.07:1114,21,0	0/0:23,0:23:63.17:0,63,1993	0/0:26,0:26:75.24:0,75,2515	0/0:36,0:36:99:0,102,3423	1/1:11,9:21:42.14:2079,42,0	1/1:8,11:19:48.16:2392,48,0	1/1:7,6:12:15.05:771,15,0	0/0:19,0:19:57.20:0,57,1934	1/1:12,14:26:75.26:3544,75,0	1/1:9,10:19:54.13:2493,54,0	1/1:2,4:5:15.05:857,15,0
chr10	12892353	.	ACAGT	A	13786.89	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=14.438;DP=535;FS=11.486;HRun=0;HaplotypeScore=143.4061;InbreedingCoeff=0.9873;MQ=62.69;MQ0=0;MQRankSum=-13.429;QD=43.49;ReadPosRankSum=5.577;VQSLOD=4.5568;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,120,3167	1/1:1,9:10:27.09:494,27,0	0/0:28,0:28:78.27:0,78,1900	0/0:17,0:17:47.99:0,48,1056	1/1:2,13:15:30.10:552,30,0	1/1:2,21:23:57.20:1048,57,0	1/1:3,15:17:39.13:717,39,0	0/0:30,0:30:84.29:0,84,2164	1/1:2,15:17:42.14:770,42,0	1/1:1,19:20:57.18:998,57,0	1/1:2,12:14:26.89:496,27,0	1/1:1,6:7:18.06:331,18,0	1/1:3,18:20:48.16:879,48,0	1/1:3,14:17:36.12:662,36,0	1/1:2,17:19:51.17:938,51,0	1/1:3,9:12:30.10:552,30,0	1/1:1,21:22:60.21:1103,60,0	1/1:0,14:14:33.11:607,33,0	0/0:18,0:18:45.15:0,45,1170	0/0:29,0:29:69.22:0,69,1730	0/0:38,0:38:99:0,114,2934	1/1:3,9:12:24.08:441,24,0	1/1:2,10:12:21.07:386,21,0	1/1:0,15:15:30.10:552,30,0	0/0:17,0:17:42.12:0,42,979	1/1:1,22:23:66.23:1214,66,0	1/1:4,17:21:48.16:883,48,0	1/1:0,5:4:9.03:165,9,0
chr10	12892354	.	CAGT	C	3856.11	PASS	AB=0.923;AC=39;AF=0.696;AN=56;BaseQRankSum=17.527;DP=537;FS=12.706;HRun=0;HaplotypeScore=168.2270;InbreedingCoeff=0.9063;MQ=65.42;MQ0=0;MQRankSum=-13.320;QD=12.20;ReadPosRankSum=6.989;VQSLOD=2.1640;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,126,3044	1/1:10,0:10:26.12:146,26,0	0/0:28,0:28:84.29:0,84,1929	0/0:20,0:20:59.38:0,59,1219	1/1:14,1:15:29.03:163,29,0	1/1:23,0:23:38.21:289,38,0	1/1:17,0:16:37.73:211,38,0	0/0:30,0:30:90.31:0,90,2141	1/1:17,0:17:40.57:225,41,0	1/1:20,0:20:50.63:273,51,0	1/1:12,2:14:25.82:146,26,0	1/1:7,0:7:17.42:98,17,0	1/1:21,0:20:29.42:237,29,0	1/1:17,0:17:34.83:195,35,0	1/1:19,0:19:30.88:255,31,0	1/1:12,0:12:29.03:163,29,0	1/1:22,0:22:22.18:286,22,0	1/1:14,0:14:31.93:179,32,0	0/0:16,0:16:48.12:0,48,1130	0/0:30,0:30:87.27:0,87,1908	0/0:39,0:39:99:0,117,2825	0/1:11,1:12:12.54:106,0,13	1/1:12,0:12:20.32:114,20,0	1/1:15,0:15:29.03:163,29,0	0/0:16,0:16:48.16:0,48,1092	1/1:23,0:23:27.95:319,28,0	1/1:21,0:21:29.51:240,30,0	1/1:5,0:4:8.71:49,9,0
chr10	12893597	.	GA	G	9923.58	PASS	AB=0.926;AC=50;AF=0.893;AN=56;BaseQRankSum=8.066;DP=610;FS=2.700;HRun=11;HaplotypeScore=101.2221;InbreedingCoeff=0.6213;MQ=72.25;MQ0=0;MQRankSum=-1.033;QD=18.48;ReadPosRankSum=3.173;VQSLOD=5.3058;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:50,1:51:99:0,132,1405	1/1:3,5:8:14.98:123,15,0	0/1:16,1:17:34.71:35,0,162	0/1:19,1:17:23.18:23,0,159	1/1:2,14:16:44.93:366,45,0	1/1:2,24:26:68.92:566,69,0	1/1:5,17:23:56.85:459,57,0	1/1:7,18:26:49.92:392,50,0	1/1:3,20:23:53.93:443,54,0	1/1:6,11:17:32.94:271,33,0	1/1:1,15:16:44.95:369,45,0	1/1:3,17:20:50.94:419,51,0	1/1:3,10:13:29.96:246,30,0	1/1:1,8:9:23.97:197,24,0	1/1:4,18:22:18.73:359,19,0	1/1:4,15:19:47.93:391,48,0	1/1:6,31:37:98.55:798,99,0	1/1:2,25:28:70.55:558,71,0	1/1:5,19:25:58.93:471,59,0	1/1:2,19:21:47.92:394,48,0	1/1:2,19:22:52.96:425,53,0	1/1:5,11:16:32.95:271,33,0	1/1:3,14:17:38.93:320,39,0	1/1:2,18:20:53.93:443,54,0	0/0:21,0:22:47.91:0,48,482	1/1:7,18:25:53.92:443,54,0	1/1:4,32:36:98.38:797,98,0	1/1:0,14:14:41.95:345,42,0
chr10	12898076	.	T	TACTACATAGAG	4904.45	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=6.719;DP=571;FS=6.328;HRun=0;HaplotypeScore=233.0387;InbreedingCoeff=0.9718;MQ=68.73;MQ0=0;MQRankSum=-11.728;QD=49.04;ReadPosRankSum=-4.836;VQSLOD=3.1789;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,102,3575	0/0:7,0:7:21.07:0,21,703	0/0:16,0:15:36.57:0,37,1051	0/0:25,0:24:51.14:0,51,1563	0/0:18,0:18:39.13:0,39,1415	0/0:22,0:21:55.43:0,55,1924	0/0:26,0:26:75.26:0,75,2672	1/1:31,0:30:86.31:2047,86,0	0/0:24,0:24:69.22:0,69,2361	0/0:27,0:27:78.26:0,78,2520	0/0:11,0:11:30.09:0,30,1005	0/0:24,0:24:66.23:0,66,2339	0/0:18,0:18:45.15:0,45,1633	0/0:23,0:23:60.21:0,60,2171	0/0:13,0:13:36.12:0,36,1246	0/0:18,0:18:54.15:0,54,1790	0/0:17,0:17:51.18:0,51,1821	0/0:22,0:22:60.21:0,60,2098	1/1:32,1:32:85.46:1989,85,0	1/1:12,2:14:9.02:442,9,0	1/1:18,4:22:12.48:426,12,0	0/0:13,0:13:39.13:0,39,1398	0/0:12,0:12:33.08:0,33,1145	0/0:39,0:39:99:0,105,3779	0/0:16,0:16:48.15:0,48,1600	0/0:24,0:24:72.23:0,72,2395	0/0:13,0:13:36.12:0,36,1282	0/0:8,0:8:18.06:0,18,653
chr10	12898077	.	AGACAGGG	A	2369.23	PASS	AB=0.699;AC=4;AF=0.071;AN=56;BaseQRankSum=-1.813;DP=565;FS=3.178;HRun=0;HaplotypeScore=172.3370;InbreedingCoeff=-0.0769;MQ=69.78;MQ0=0;MQRankSum=-7.411;QD=24.68;ReadPosRankSum=-2.415;VQSLOD=2.6354;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,102,4218	0/0:7,0:7:21.07:0,21,882	0/0:16,0:15:42.59:0,43,1502	0/0:25,0:24:63.21:0,63,2331	0/0:15,0:15:39.13:0,39,1637	0/0:22,0:21:60.21:0,60,2501	0/0:27,0:27:75.26:0,75,3136	0/1:16,13:30:99:1072,0,698	0/0:24,0:24:72.25:0,72,2971	0/0:27,0:27:81.28:0,81,3203	0/0:11,0:11:30.09:0,30,1158	0/0:23,0:23:69.24:0,69,2817	0/0:18,0:18:48.16:0,48,2002	0/0:23,0:23:63.22:0,63,2644	0/0:13,0:13:36.12:0,36,1502	0/0:18,0:18:54.17:0,54,2164	0/0:17,0:17:51.18:0,51,2080	0/0:22,0:22:60.21:0,60,2437	0/1:14,13:29:99:1245,0,423	0/1:7,7:14:31.87:72,0,32	0/1:13,8:22:76:89,0,76	0/0:14,0:14:42.14:0,42,1747	0/0:13,0:13:35.95:0,36,1434	0/0:39,0:39:99:0,111,4565	0/0:16,0:16:48.15:0,48,1842	0/0:24,0:24:72.24:0,72,2922	0/0:13,0:13:36.12:0,36,1469	0/0:8,0:8:24.08:0,24,1007
chr10	12898080	.	C	CTACAT	1248.99	PASS	AB=0.983;AC=6;AF=0.107;AN=56;BaseQRankSum=8.539;DP=575;FS=5.772;HRun=0;HaplotypeScore=179.6069;InbreedingCoeff=0.5682;MQ=69.83;MQ0=0;MQRankSum=-7.290;QD=13.15;ReadPosRankSum=-2.495;VQSLOD=2.2291;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,111,2397	0/0:7,0:7:21.07:0,21,488	0/0:15,0:15:36.12:0,36,777	0/0:26,0:25:52.83:0,53,1230	0/0:16,0:16:42.13:0,42,933	0/0:22,0:21:60.21:0,60,1370	0/0:28,0:28:75.26:0,75,1748	0/1:32,0:32:99:646,0,325	0/0:25,0:25:72.25:0,72,1633	0/0:26,0:26:78.25:0,78,1707	0/0:10,0:10:27.09:0,27,630	0/0:23,0:23:69.22:0,69,1540	0/0:18,0:18:48.16:0,48,1098	0/0:24,0:24:66.21:0,66,1474	0/0:15,0:15:36.12:0,36,837	0/0:17,0:17:51.18:0,51,1169	0/0:18,0:18:54.16:0,54,1182	0/0:22,0:21:57.20:0,57,1329	0/1:27,1:27:99:352,0,337	1/1:12,2:14:9.03:213,9,0	1/1:16,4:21:8.81:164,9,0	0/0:15,0:15:45.14:0,45,980	0/0:14,0:14:35.95:0,36,773	0/0:41,0:41:99:0,114,2538	0/0:15,0:15:45.15:0,45,1047	0/0:23,0:23:69.24:0,69,1593	0/0:13,0:13:36.12:0,36,816	0/0:9,0:9:27.07:0,27,534
chr10	12898081	.	AG	A	1141.43	PASS	AB=0.750;AC=7;AF=0.125;AN=56;BaseQRankSum=7.311;DP=573;FS=1.676;HRun=3;HaplotypeScore=115.9948;InbreedingCoeff=0.7715;MQ=69.30;MQ0=0;MQRankSum=-9.976;QD=12.54;ReadPosRankSum=-3.167;VQSLOD=1.3689;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,117,1645	0/0:7,0:7:21.07:0,21,303	0/0:14,0:14:35.48:0,35,487	0/0:25,0:25:54.85:0,55,917	0/0:16,0:16:42.14:0,42,605	0/0:23,0:22:60.19:0,60,846	0/0:28,0:28:78.25:0,78,1105	1/1:13,18:31:82.98:724,83,0	0/0:25,0:25:72.20:0,72,1010	0/0:25,0:25:75.25:0,75,1080	0/0:10,0:10:27.09:0,27,387	0/0:22,0:22:66.22:0,66,940	0/0:18,0:18:48.16:0,48,683	0/0:25,0:25:69.22:0,69,974	0/0:15,0:15:39.12:0,39,542	0/0:18,0:18:54.17:0,54,759	0/0:18,0:18:48.16:0,48,691	0/0:22,0:21:60.19:0,60,845	1/1:14,11:24:61.87:463,62,0	1/1:9,5:14:3:29,3,0	0/1:14,7:21:25.83:64,0,26	0/0:15,0:15:45.15:0,45,644	0/0:13,0:13:35.94:0,36,497	0/0:43,0:43:99:0,120,1687	0/0:16,0:16:45.09:0,45,590	0/0:23,0:23:69.23:0,69,993	0/0:12,0:12:33.11:0,33,475	0/0:9,0:9:27.09:0,27,389
chr10	12898082	.	G	GAGA	1230.61	PASS	AB=0.935;AC=5;AF=0.089;AN=56;BaseQRankSum=1.400;DP=576;FS=2.241;HRun=0;HaplotypeScore=141.8139;InbreedingCoeff=0.2320;MQ=69.19;MQ0=0;MQRankSum=-6.520;QD=13.23;ReadPosRankSum=-3.254;VQSLOD=2.5721;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,117,2091	0/0:7,0:7:21.07:0,21,392	0/0:13,0:13:36.46:0,36,631	0/0:27,0:26:71.90:0,72,1181	0/0:16,0:16:42.14:0,42,782	0/0:24,0:23:63.19:0,63,1112	0/0:28,0:28:78.26:0,78,1408	0/1:31,0:31:99:696,0,172	0/0:25,0:25:75.24:0,75,1335	0/0:25,0:25:75.26:0,75,1398	0/0:10,0:10:27.09:0,27,503	0/0:22,0:22:66.23:0,66,1220	0/0:18,0:18:48.16:0,48,889	0/0:25,0:25:69.22:0,69,1256	0/0:15,0:15:39.12:0,39,682	0/0:18,0:18:54.17:0,54,976	0/0:17,0:17:51.15:0,51,916	0/0:22,0:21:60.19:0,60,1088	0/1:26,1:26:99:504,0,179	1/1:12,2:14:3.48:65,3,0	0/1:17,4:21:20.66:78,0,21	0/0:15,0:15:45.15:0,45,836	0/0:13,0:13:35.94:0,36,626	0/0:43,0:43:99:0,120,2171	0/0:16,0:16:48.11:0,48,771	0/0:23,0:23:69.24:0,69,1287	0/0:13,0:13:33.11:0,33,615	0/0:9,0:9:27.09:0,27,501
chr10	12898149	.	A	AC	19345.62	PASS	AB=0.989;AC=49;AF=0.875;AN=56;BaseQRankSum=3.088;DP=714;FS=4.338;HRun=1;HaplotypeScore=117.5962;InbreedingCoeff=0.8548;MQ=76.27;MQ0=4;MQRankSum=-3.081;QD=32.79;ReadPosRankSum=3.745;VQSLOD=4.5818;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,147,1878	1/1:0,12:12:33.11:494,33,0	0/0:53,1:39:28.81:0,29,706	0/1:88,1:61:7.43:7,0,856	1/1:2,9:11:15.05:225,15,0	1/1:0,30:30:84.28:1256,84,0	1/1:4,28:32:82.52:1206,83,0	1/1:1,17:18:51.15:738,51,0	1/1:1,15:16:32.89:617,33,0	1/1:0,16:16:48.15:698,48,0	1/1:0,9:9:27.09:404,27,0	1/1:0,27:27:81.27:1210,81,0	1/1:0,16:16:39.13:582,39,0	1/1:1,24:25:66.22:986,66,0	1/1:0,23:23:63.21:942,63,0	1/1:0,20:20:54.18:806,54,0	1/1:1,20:21:60.20:897,60,0	1/1:1,28:28:66.22:986,66,0	1/1:2,2:19:40.12:638,40,0	1/1:0,8:8:15.05:223,15,0	1/1:4,25:30:53.04:861,53,0	1/1:1,24:25:57.19:837,57,0	1/1:1,13:14:36.12:536,36,0	1/1:3,33:36:93.32:1391,93,0	0/0:19,0:19:57.19:0,57,740	1/1:1,31:32:93.31:1384,93,0	1/1:0,21:21:63.21:927,63,0	1/1:0,11:11:33.11:494,33,0
chr10	12900584	.	A	ATTTTG	13342.46	PASS	AB=0.929;AC=49;AF=0.875;AN=56;BaseQRankSum=-0.300;DP=548;FS=18.719;HRun=0;HaplotypeScore=107.6151;InbreedingCoeff=0.8387;MQ=66.04;MQ0=2;MQRankSum=-2.188;QD=28.69;ReadPosRankSum=2.009;VQSLOD=3.0730;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:39:81.84:0,82,1368	1/1:11,0:11:24.07:369,24,0	0/0:28,0:19:36.68:0,37,395	0/1:12,0:7:9.70:10,0,86	1/1:24,1:26:53.99:759,54,0	1/1:14,1:15:20.99:351,21,0	1/1:15,0:16:27.07:443,27,0	1/1:15,0:14:38.23:389,38,0	1/1:14,0:14:18.05:290,18,0	1/1:20,0:20:54.05:733,54,0	1/1:27,1:27:63.03:837,63,0	1/1:11,0:12:27.08:429,27,0	1/1:21,1:22:42.13:687,42,0	1/1:20,0:20:29.62:453,30,0	1/1:19,0:19:33.11:550,33,0	1/1:15,1:17:27.07:471,27,0	1/1:27,0:26:46.94:672,47,0	1/1:24,0:24:51.17:839,51,0	1/1:20,0:18:48.05:637,48,0	1/1:25,0:25:63.10:986,63,0	1/1:7,0:7:12.03:166,12,0	1/1:19,0:18:23.90:304,24,0	1/1:15,1:17:29.32:416,29,0	1/1:15,0:14:21.07:347,21,0	0/0:14,0:16:41.50:0,41,724	1/1:30,0:29:86.26:1220,86,0	1/1:20,0:20:38.99:568,39,0	1/1:13,0:13:27.09:416,27,0
chr10	12900585	.	T	TTTTG	18265.43	PASS	AB=1.000;AC=49;AF=0.875;AN=56;BaseQRankSum=-6.385;DP=588;FS=11.678;HRun=0;HaplotypeScore=95.4588;InbreedingCoeff=0.8543;MQ=64.40;MQ0=2;MQRankSum=-3.942;QD=36.17;ReadPosRankSum=1.744;VQSLOD=4.4762;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:89.97:0,90,1366	1/1:2,9:11:24.07:518,24,0	0/0:28,0:18:36.40:0,36,393	0/1:15,0:7:6.55:7,0,109	1/1:11,15:30:59.82:1046,60,0	1/1:6,9:15:24.03:489,24,0	1/1:5,12:17:27.06:555,27,0	1/1:2,12:15:41.14:465,41,0	1/1:3,11:15:18.05:398,18,0	1/1:6,17:26:69.11:1141,69,0	1/1:8,19:28:66.54:1130,67,0	1/1:3,9:14:27.08:611,27,0	1/1:8,16:26:47.91:955,48,0	1/1:6,15:21:29.63:629,30,0	1/1:0,19:19:33.11:774,33,0	1/1:4,11:16:27.07:607,27,0	1/1:7,19:28:46.42:938,46,0	1/1:3,21:24:51.14:1167,51,0	1/1:5,15:18:47.53:696,48,0	1/1:3,24:29:63:1360,63,0	1/1:2,6:8:12.02:213,12,0	1/1:8,12:20:23.90:412,24,0	1/1:6,12:19:32.50:558,32,0	1/1:0,13:13:21.07:491,21,0	0/0:16,0:16:41.47:0,41,661	1/1:8,28:37:99:1711,101,0	1/1:3,15:20:42.01:855,42,0	1/1:2,9:13:26.30:539,26,0
chr10	12900586	.	T	TTTG	11894.35	PASS	AB=0.955;AC=47;AF=0.839;AN=56;BaseQRankSum=0.607;DP=570;FS=0.456;HRun=0;HaplotypeScore=110.6817;InbreedingCoeff=0.5877;MQ=64.32;MQ0=2;MQRankSum=-4.412;QD=24.42;ReadPosRankSum=4.764;VQSLOD=4.3793;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,105,1399	1/1:9,1:10:24.07:337,24,0	0/0:28,0:18:36.92:0,37,416	0/1:16,0:7:24.23:24,0,120	0/1:27,2:29:18.31:700,0,18	1/1:14,1:15:6.13:252,6,0	1/1:15,1:16:26.06:345,26,0	0/1:12,1:12:8.22:291,0,8	1/1:11,0:11:18.06:266,18,0	1/1:27,1:28:60.29:730,60,0	1/1:25,4:28:69.15:839,69,0	1/1:14,0:14:27.07:376,27,0	1/1:21,2:23:47.26:612,47,0	1/1:19,2:21:31.96:480,32,0	1/1:19,0:19:36.12:491,36,0	1/1:15,0:15:27.07:360,27,0	1/1:25,3:27:45.47:658,45,0	1/1:22,1:23:31.42:700,31,0	1/1:18,1:17:41.52:486,42,0	1/1:30,0:30:29.83:790,30,0	1/1:6,1:7:11.93:157,12,0	1/1:18,2:19:23.47:269,23,0	1/1:18,0:18:31.83:346,32,0	1/1:13,0:12:21.07:288,21,0	0/0:16,0:16:44.39:0,44,619	1/1:38,0:37:99:1177,100,0	1/1:17,2:19:42:578,42,0	1/1:12,1:13:18.79:342,19,0
chr10	12900823	.	CAT	C	14545.06	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=11.221;DP=599;FS=1.436;HRun=0;HaplotypeScore=82.0080;InbreedingCoeff=0.9982;MQ=74.68;MQ0=1;MQRankSum=-2.909;QD=38.38;ReadPosRankSum=6.760;VQSLOD=6.7163;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:84.29:0,84,1560	1/1:0,8:8:21.07:309,21,0	0/0:13,0:12:18.45:0,18,454	0/0:21,0:20:56.86:0,57,947	1/1:0,14:14:39.13:574,39,0	0/0:19,0:19:48.16:0,48,898	0/0:27,0:27:78.25:0,78,1420	0/0:23,0:23:66.20:0,66,1188	1/1:0,20:20:60.20:883,60,0	1/1:1,25:26:72.23:1028,72,0	1/1:0,15:15:33.11:486,33,0	1/1:0,22:22:57.19:839,57,0	1/1:0,21:21:57.19:829,57,0	1/1:0,15:15:36.12:530,36,0	1/1:2,22:24:54.18:795,54,0	1/1:0,21:21:60.20:883,60,0	1/1:0,28:28:72.24:1051,72,0	1/1:0,26:26:69.23:1016,69,0	0/0:19,0:19:53.92:0,54,952	0/0:21,0:21:57.18:0,57,1028	0/0:27,0:27:78.21:0,78,1392	1/1:0,12:12:33.11:486,33,0	1/1:1,14:15:36.07:528,36,0	1/1:1,36:36:99:1502,102,0	0/0:20,0:20:51.17:0,51,947	1/1:0,26:26:75.25:1103,75,0	1/1:1,26:27:63.21:908,63,0	1/1:3,19:22:54.18:795,54,0
chr10	12901207	.	AGAAGCTAAACTGATTCAGCTTC	A	25316.03	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=17.475;DP=682;FS=12.580;HRun=0;HaplotypeScore=389.8261;InbreedingCoeff=0.9725;MQ=69.72;MQ0=0;MQRankSum=-16.526;QD=71.11;ReadPosRankSum=2.323;VQSLOD=3.2927;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:67,0:67:99:0,199,17706	1/1:2,4:6:9.03:505,9,0	0/0:11,0:11:27.08:0,27,935	0/0:15,0:15:29.88:0,30,1174	1/1:7,14:21:24.05:483,24,0	0/0:24,0:24:69.24:0,69,7066	0/0:45,0:45:99:0,120,10373	0/0:28,0:28:72.24:0,72,5987	1/1:4,24:28:54.19:3083,54,0	1/1:8,12:20:36.12:2036,36,0	1/1:5,10:15:12.04:438,12,0	1/1:7,18:25:24.02:973,24,0	1/1:5,12:17:25.64:1608,26,0	1/1:5,12:17:24.08:898,24,0	1/1:10,19:29:36.12:1578,36,0	1/1:7,20:27:48.16:2608,48,0	1/1:13,11:24:18.06:981,18,0	1/1:5,15:20:39.13:2146,39,0	0/0:27,0:27:75.26:0,75,4832	0/0:22,0:22:60.21:0,60,5454	0/0:64,0:64:99:0,178,16291	1/1:8,7:15:15.05:592,15,0	1/1:5,8:13:21.07:786,21,0	1/1:7,15:22:24.08:1024,24,0	0/0:23,0:23:66.21:0,66,5744	1/1:12,16:28:48.16:2705,48,0	1/1:6,18:24:48.64:2331,49,0	1/1:0,5:3:9.03:541,9,0
chr10	12901702	.	GA	G	2766	PASS	AB=0.768;AC=44;AF=0.957;AN=46;BaseQRankSum=-2.871;DP=114;FS=23.520;HRun=4;HaplotypeScore=17.8599;InbreedingCoeff=-0.1088;MQ=68.90;MQ0=1;MQRankSum=-1.247;QD=24.70;ReadPosRankSum=2.330;VQSLOD=1.5222;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,9:10:21.06:252,21,0	./.	0/1:4,1:3:7.21:40,0,7	0/1:8,3:7:23.29:57,0,23	./.	1/1:0,3:3:6.02:72,6,0	1/1:0,3:3:9.03:108,9,0	1/1:1,8:9:18.01:191,18,0	1/1:0,4:4:9.03:108,9,0	1/1:0,2:2:6.02:72,6,0	./.	1/1:0,1:1:3.01:36,3,0	1/1:0,3:3:9.03:108,9,0	1/1:0,2:2:6.02:72,6,0	1/1:0,2:2:6.02:72,6,0	1/1:0,4:4:12.04:144,12,0	1/1:0,3:3:3.01:36,3,0	1/1:2,8:10:21.02:236,21,0	1/1:0,5:5:15.05:180,15,0	./.	1/1:1,11:12:30.09:359,30,0	./.	1/1:0,2:2:3.01:36,3,0	1/1:1,5:6:15.05:180,15,0	1/1:0,2:2:6.02:72,6,0	1/1:0,5:5:15.05:178,15,0	1/1:0,4:4:12.04:144,12,0	1/1:0,3:3:9.03:108,9,0
chr10	12901765	.	CTTTGTAT	C	976.74	PASS	AB=0.759;AC=15;AF=0.268;AN=56;BaseQRankSum=7.939;DP=165;FS=1.043;HRun=0;HaplotypeScore=58.1199;InbreedingCoeff=-0.2651;MQ=87.34;MQ0=0;MQRankSum=-6.280;QD=12.85;ReadPosRankSum=3.501;VQSLOD=1.6152;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:27.04:0,27,1023	1/1:0,1:1:3.01:57,3,0	0/1:7,0:6:7.86:8,0,322	0/0:17,0:16:31.97:0,32,906	0/1:3,3:6:99:101,0,359	0/0:3,0:3:9.03:0,9,376	0/0:4,0:4:12.04:0,12,504	0/0:6,0:6:18.06:0,18,763	0/1:2,1:3:46.85:47,0,242	0/1:6,3:9:99:134,0,728	0/1:1,1:2:46.58:47,0,119	0/1:3,3:6:99:147,0,358	0/0:3,0:3:9.03:0,9,352	0/0:2,0:2:6.02:0,6,238	0/0:3,0:3:9.03:0,9,376	0/1:3,1:4:30.41:30,0,364	0/0:13,0:13:36.12:0,36,1493	0/0:6,0:6:15.05:0,15,627	0/1:7,2:9:86.26:86,0,644	0/1:2,1:3:48.95:49,0,243	0/0:6,0:6:18.06:0,18,751	0/1:4,3:7:99:160,0,482	0/1:3,2:5:89:89,0,362	0/0:6,0:6:18.06:0,18,754	0/0:1,0:1:3.01:0,3,125	0/1:5,3:8:99:142,0,605	0/0:8,0:8:23.95:0,24,840	0/1:5,1:6:33.49:33,0,611
chr10	12901773	.	CTGG	C	117.45	PASS	AB=0.767;AC=13;AF=0.232;AN=56;BaseQRankSum=7.661;DP=187;FS=0.000;HRun=0;HaplotypeScore=50.9324;InbreedingCoeff=-0.1927;MQ=84.66;MQ0=0;MQRankSum=-5.072;QD=1.57;ReadPosRankSum=1.715;VQSLOD=1.1674;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:27.09:0,27,665	1/1:0,1:1:2.98:22,3,0	0/1:8,0:8:38.89:39,0,270	0/0:17,0:16:0.76:0,1,689	0/1:3,3:6:8.95:9,0,211	0/0:3,0:3:9.03:0,9,221	0/0:5,0:5:15.05:0,15,370	0/0:8,0:8:24.08:0,24,592	0/1:2,1:3:12.12:12,0,139	0/1:6,3:9:31.91:32,0,417	0/0:3,1:4:11.87:0,12,233	0/1:4,3:7:21.07:21,0,234	0/0:3,0:3:9.03:0,9,188	0/0:2,0:2:6.02:0,6,148	0/0:7,0:7:21.03:0,21,457	0/0:3,1:4:9.50:0,10,222	0/0:15,0:15:42.08:0,42,930	0/0:7,0:7:21.07:0,21,490	0/1:5,2:7:26.76:27,0,280	0/1:3,1:4:10.31:10,0,210	0/0:9,0:9:27.09:0,27,665	0/1:5,3:8:24.63:25,0,347	0/1:5,2:7:8.98:9,0,349	0/0:7,0:7:21.07:0,21,517	0/0:1,0:1:3.01:0,3,74	0/1:5,3:8:47.92:48,0,346	0/0:8,0:8:21.07:0,21,516	0/1:5,1:6:9.43:9,0,352
chr10	12901831	.	GCTTGCCTA	G	2710.32	PASS	AB=0.800;AC=24;AF=0.429;AN=56;BaseQRankSum=10.927;DP=258;FS=51.246;HRun=0;HaplotypeScore=103.6358;InbreedingCoeff=-0.5493;MQ=43.33;MQ0=2;MQRankSum=-9.262;QD=13.22;ReadPosRankSum=2.970;VQSLOD=-0.0007;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:27.09:0,27,1094	1/1:1,1:2:3.01:71,3,0	0/0:10,0:7:18.06:0,18,730	0/0:17,0:14:42.14:0,42,1728	0/1:5,2:7:37.78:38,0,474	0/1:3,3:6:99:189,0,349	0/1:7,7:14:99:445,0,929	0/1:15,1:16:21.72:22,0,1728	1/1:3,2:5:6.02:140,6,0	0/1:8,2:10:99:113,0,933	0/1:6,4:9:99:127,0,399	0/1:4,4:8:99:255,0,448	0/1:7,1:8:51.73:52,0,674	0/1:2,3:5:99:178,0,196	0/1:8,3:11:99:159,0,993	0/1:4,2:6:99:124,0,400	0/1:12,3:15:99:171,0,1298	0/1:9,2:11:99:112,0,1078	0/1:8,2:9:99:116,0,481	0/1:5,2:7:99:120,0,472	0/1:12,3:15:99:147,0,1416	0/1:5,0:5:39.67:40,0,478	0/0:7,1:8:1.46:0,1,476	0/0:8,0:8:24.08:0,24,948	0/0:1,0:1:3.01:0,3,139	0/1:11,3:14:99:164,0,1106	0/1:8,2:10:44.27:44,0,945	0/1:9,1:10:41.49:41,0,1218
chr10	12901854	.	TCG	T	271.89	PASS	AB=0.745;AC=14;AF=0.259;AN=54;BaseQRankSum=8.119;DP=170;FS=31.914;HRun=0;HaplotypeScore=60.0957;InbreedingCoeff=-0.3869;MQ=40.41;MQ0=1;MQRankSum=-6.557;QD=2.75;ReadPosRankSum=1.739;VQSLOD=0.2870;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:5:12.04:0,12,243	./.	0/0:6,0:4:12.04:0,12,230	0/0:10,0:10:30.09:0,30,531	0/0:5,1:6:14.93:0,15,300	0/1:2,3:5:37.77:39,0,38	0/1:5,5:10:39.65:40,0,278	0/1:10,2:12:21.68:22,0,573	0/1:3,2:5:30.69:31,0,108	0/1:3,2:5:43.05:43,0,167	0/0:3,4:6:6.02:0,6,122	0/1:1,1:2:14.39:14,0,55	0/1:5,1:6:3.30:3,0,275	0/1:1,3:4:10.39:10,0,55	0/1:5,1:6:9.76:10,0,285	0/0:2,1:3:3.01:0,3,60	0/1:11,2:13:24:24,0,512	0/1:8,2:10:34.01:34,0,289	0/1:4,4:7:97.93:98,0,162	0/1:4,2:6:10.27:10,0,169	0/0:9,2:11:24.08:0,24,483	0/0:2,1:3:5.99:0,6,83	0/0:4,0:4:12.04:0,12,232	0/0:4,1:5:6.02:0,6,122	0/0:1,0:1:3.01:0,3,61	0/1:5,2:7:38.02:38,0,282	0/0:3,1:4:6.02:0,6,94	0/0:6,0:6:18.06:0,18,364
chr10	12902158	.	C	CGCTTGCCTAGCGA	3944.86	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=-1.585;DP=347;FS=5.901;HRun=0;HaplotypeScore=124.6803;InbreedingCoeff=0.8127;MQ=55.35;MQ0=10;MQRankSum=-6.646;QD=69.21;ReadPosRankSum=-3.516;VQSLOD=2.5325;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:51.18:0,51,2000	0/0:6,0:6:18.06:0,18,726	0/0:23,0:7:14.86:0,15,633	0/0:27,0:11:21.02:0,21,437	0/0:10,0:9:21.07:0,21,780	0/0:16,0:16:42.10:0,42,1445	0/0:17,0:17:45.15:0,45,1771	1/1:15,2:11:27.01:1061,27,0	0/0:12,0:12:36.11:0,36,1345	0/0:6,0:6:18.06:0,18,511	0/1:10,0:10:26.22:26,0,801	0/0:11,0:11:29.15:0,29,1202	0/0:8,0:7:18.06:0,18,576	0/0:10,0:10:30.10:0,30,1198	0/0:9,0:9:27.09:0,27,1089	0/0:7,0:7:21.06:0,21,750	0/0:24,0:24:66.17:0,66,2426	0/0:14,0:13:36.12:0,36,1414	1/1:3,7:13:33.11:1779,33,0	1/1:5,1:6:9.03:413,9,0	1/1:6,3:10:15.05:665,15,0	0/0:6,0:5:15.05:0,15,571	0/0:8,0:8:21.07:0,21,789	0/0:17,0:17:45.14:0,45,1718	0/0:5,0:5:9.03:0,9,293	0/0:13,0:12:33.11:0,33,1262	0/0:17,0:17:22.48:0,22,1688	0/0:5,0:5:15.05:0,15,544
chr10	12905968	.	C	CT	4138.85	PASS	AB=0.648;AC=30;AF=0.536;AN=56;BaseQRankSum=-7.390;DP=595;FS=8.194;HRun=13;HaplotypeScore=73.4512;InbreedingCoeff=0.3986;MQ=73.78;MQ0=0;MQRankSum=-0.428;QD=11.04;ReadPosRankSum=-0.573;VQSLOD=2.7195;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:32:58.19:0,58,382	1/1:4,9:15:6.16:175,6,0	0/0:21,0:17:10.78:0,11,63	0/0:12,0:11:4.48:0,4,15	1/1:4,17:22:8.22:247,8,0	0/0:19,0:19:41.58:0,42,284	0/0:19,0:23:39.05:0,39,230	0/0:42,1:44:6.61:0,7,355	0/1:9,10:19:11.13:193,0,11	1/1:7,17:25:42.95:351,43,0	1/1:6,12:19:23.98:214,24,0	1/1:6,12:20:26.82:228,27,0	0/1:4,11:16:20.07:115,0,20	0/1:4,9:14:9.88:123,0,10	0/1:7,10:17:2.08:169,0,2	0/1:6,14:20:22.71:239,0,23	1/1:4,18:22:15.41:277,15,0	1/1:7,16:23:32.73:306,33,0	0/1:16,1:19:21.89:22,0,140	0/0:15,0:15:32.45:0,32,217	0/0:23,0:24:46.57:0,47,314	1/1:3,17:20:16.70:289,17,0	0/1:5,12:18:15.12:130,0,15	1/1:2,12:15:23.19:245,23,0	0/0:26,0:29:57.53:0,58,380	1/1:15,18:34:44.84:381,45,0	0/1:10,16:27:19.77:254,0,20	1/1:1,8:10:12.84:182,13,0
chr10	12908573	.	G	GA	222.02	PASS	AB=0.849;AC=13;AF=0.232;AN=56;BaseQRankSum=-3.382;DP=557;FS=5.800;HRun=16;HaplotypeScore=95.6374;InbreedingCoeff=-0.1543;MQ=71.21;MQ0=1;MQRankSum=-0.583;QD=0.90;ReadPosRankSum=-2.135;VQSLOD=-0.5976;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:17,25:43:7.64:119,0,8	0/1:3,1:5:0.98:19,0,1	0/0:22,0:17:0.73:0,1,26	0/0:14,0:10:2.20:0,2,29	0/0:16,0:16:14.68:0,15,75	0/1:8,0:12:0.52:1,0,42	0/1:29,1:32:15.41:15,0,92	0/1:16,1:27:3.70:4,0,41	0/1:23,3:26:23.04:23,0,79	0/0:24,0:25:19.97:0,20,105	0/0:8,1:13:3.49:0,3,11	0/0:20,0:24:15.03:0,15,77	0/1:13,1:14:9.34:19,0,9	0/0:19,0:19:12.21:0,12,69	0/1:9,4:13:15.34:15,0,25	0/1:8,5:13:6.51:7,0,62	0/0:35,2:40:27.16:0,27,204	0/0:19,6:25:6.05:0,6,119	0/0:13,0:21:12.37:0,12,48	0/0:6,0:17:1.99:0,2,31	0/1:9,0:10:0:0,0,0	0/0:15,3:17:8.43:0,8,50	0/0:21,0:23:11.82:0,12,82	0/1:21,5:26:0.71:1,0,105	0/1:7,6:13:13.63:76,0,14	0/0:17,2:18:11.01:0,11,62	0/0:12,0:12:2.19:0,2,24	0/1:10,0:12:22.34:51,0,22
chr10	12910501	.	CGCGTGTGT	C	2400.89	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=3.604;DP=417;FS=6.639;HRun=0;HaplotypeScore=132.9131;InbreedingCoeff=-0.1342;MQ=54.22;MQ0=14;MQRankSum=-6.365;QD=9.03;ReadPosRankSum=-1.899;VQSLOD=1.5228;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:25:60.98:0,61,882	0/1:3,0:3:29.03:29,0,36	0/0:21,0:12:21.72:0,22,271	0/0:21,0:9:16.10:0,16,165	0/1:15,0:14:55.56:56,0,75	0/1:8,0:8:28.96:56,0,29	0/0:15,0:14:20.90:0,21,161	1/1:16,0:16:48.01:432,48,0	0/1:8,0:8:29.95:107,0,30	0/0:31,0:30:48.06:0,48,600	0/0:12,0:12:6.69:0,7,39	0/1:12,0:12:17.18:17,0,116	0/1:14,0:14:87.18:87,0,110	0/1:16,0:16:74.83:146,0,75	0/1:11,0:11:88.91:100,0,89	0/1:11,0:11:20.16:20,0,98	0/1:22,0:21:2.53:3,0,182	0/1:19,0:19:99:141,0,159	1/1:17,3:22:66.05:853,66,0	1/1:2,13:15:2.96:19,3,0	1/1:17,0:17:20.44:167,20,0	0/0:10,0:10:11.95:0,12,92	0/1:13,0:13:53.94:71,0,54	0/1:20,0:20:12.40:12,0,136	0/0:10,0:10:30.01:0,30,797	0/1:10,0:10:41.13:41,0,144	0/1:14,0:12:71.72:219,0,72	0/0:4,0:3:8.94:0,9,67
chr10	12910503	.	CGTGTGTGTGT	C	3596.09	PASS	AB=0.812;AC=34;AF=0.739;AN=46;BaseQRankSum=4.394;DP=430;FS=7.871;HRun=0;HaplotypeScore=143.2135;InbreedingCoeff=0.2755;MQ=53.49;MQ0=18;MQRankSum=-4.971;QD=12.53;ReadPosRankSum=1.004;VQSLOD=2.1020;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:27:24.08:0,24,846	1/1:3,1:3:3.01:88,3,0	./.	./.	1/1:7,7:14:5.95:168,6,0	1/1:4,0:10:6.02:131,6,0	0/1:15,0:14:0:0,0,0	./.	1/1:2,6:8:9.03:266,9,0	0/1:28,3:30:9.82:125,0,10	1/1:12,0:12:2.97:20,3,0	1/1:8,3:11:2.85:88,3,0	1/1:7,8:15:9.50:265,9,0	0/1:6,10:17:14.33:362,0,14	1/1:6,7:12:9.03:266,9,0	1/1:6,5:11:3.01:89,3,0	1/1:16,6:22:3.01:89,3,0	1/1:10,7:18:15.05:405,15,0	1/1:22,0:22:17.12:287,17,0	./.	0/0:17,0:17:0.17:0,0,20	0/0:5,6:10:0:0,0,0	1/1:7,5:12:6.02:177,6,0	1/1:14,6:21:2.95:88,3,0	0/0:8,0:10:24.08:0,24,852	0/1:9,5:14:5.30:166,0,5	1/1:7,3:12:23.75:517,24,0	./.
chr10	12912308	.	T	TGTTTGGGTTTTTGTTTGGTTGGT	20125.32	PASS	AB=0.875;AC=52;AF=0.963;AN=54;BaseQRankSum=-1.073;DP=126;FS=15.601;HRun=0;HaplotypeScore=126.2624;InbreedingCoeff=-0.0926;MQ=54.78;MQ0=0;MQRankSum=-2.323;QD=159.72;ReadPosRankSum=1.740;VQSLOD=3.7380;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:13:21.07:1800,21,0	1/1:4,0:4:12.04:907,12,0	1/1:1,1:4:12.04:851,12,0	0/1:4,0:5:34.17:566,0,34	1/1:5,0:5:7.84:548,8,0	1/1:9,0:9:15.05:1320,15,0	1/1:8,0:7:21.07:1056,21,0	1/1:5,0:4:12.04:956,12,0	1/1:3,0:3:6.02:471,6,0	1/1:2,0:2:6.02:82,6,0	1/1:2,0:2:6.02:393,6,0	1/1:1,0:1:3.01:297,3,0	1/1:3,0:3:9.03:974,9,0	0/1:3,0:3:0.65:410,0,1	1/1:1,0:1:3.01:313,3,0	1/1:4,0:4:9.03:737,9,0	1/1:2,0:2:3.01:185,3,0	1/1:5,0:5:12.04:986,12,0	1/1:3,0:2:6.02:524,6,0	1/1:6,0:6:9.03:650,9,0	1/1:8,0:7:18.06:556,18,0	1/1:4,0:4:12.04:823,12,0	1/1:6,0:6:12.04:970,12,0	1/1:2,0:2:6.02:354,6,0	1/1:7,0:7:15.05:1239,15,0	1/1:7,0:7:21.07:1365,21,0	1/1:3,0:3:9.03:790,9,0	./.
chr10	12912946	.	A	AACAG	20848.04	PASS	AB=0.579;AC=39;AF=0.696;AN=56;BaseQRankSum=-1.656;DP=871;FS=17.421;HRun=0;HaplotypeScore=165.5242;InbreedingCoeff=0.9031;MQ=61.76;MQ0=3;MQRankSum=-2.158;QD=35.58;ReadPosRankSum=4.229;VQSLOD=3.4896;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:93.07:0,93,1318	0/1:3,8:11:1.92:401,0,2	0/0:45,0:34:0.34:0,0,642	0/0:40,0:25:20.02:0,20,288	1/1:6,21:29:48.16:1095,48,0	1/1:12,21:34:48.16:1122,48,0	1/1:12,17:31:33.11:672,33,0	0/0:38,0:38:69.17:0,69,978	1/1:6,30:38:57.20:1381,57,0	1/1:17,24:48:93.19:1847,93,0	1/1:5,11:16:36.12:748,36,0	1/1:5,16:22:30.10:695,30,0	1/1:10,19:31:39.02:895,39,0	1/1:6,30:37:66.23:1547,66,0	1/1:6,20:27:39.13:956,39,0	1/1:8,22:31:36.12:824,36,0	1/1:13,25:38:48.16:1176,48,0	1/1:6,26:32:54.19:1308,54,0	0/0:16,0:14:24.08:0,24,394	0/0:31,0:31:54.11:0,54,833	0/0:49,0:49:99:0,111,1717	1/1:4,12:17:24.08:568,24,0	1/1:6,14:20:33.11:753,33,0	1/1:5,15:21:27.09:661,27,0	0/0:22,0:22:42.05:0,42,611	1/1:9,26:36:81.54:1705,82,0	1/1:8,36:45:75.26:1759,75,0	1/1:7,15:22:30.10:735,30,0
chr10	12913266	.	G	GATGA	2312.23	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-7.821;DP=648;FS=2.325;HRun=0;HaplotypeScore=102.6454;InbreedingCoeff=0.9921;MQ=76.73;MQ0=0;MQRankSum=-1.228;QD=55.05;ReadPosRankSum=0.489;VQSLOD=4.9255;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:58:99:0,159,2643	0/0:8,0:8:24.08:0,24,430	0/0:11,0:11:20.84:0,21,288	0/0:15,0:15:20.66:0,21,341	0/0:14,0:14:39.13:0,39,704	1/1:0,11:11:30.10:785,30,0	1/1:6,25:31:63.22:1648,63,0	0/0:26,0:26:66.23:0,66,1197	0/0:20,0:20:57.15:0,57,947	0/0:24,0:24:57.20:0,57,1031	0/0:9,0:9:21.07:0,21,382	0/0:29,0:29:81.26:0,81,1433	0/0:24,0:24:69.14:0,69,1127	0/0:21,0:21:60.19:0,60,1055	0/0:34,0:34:99:0,99,1741	0/0:29,0:29:75.24:0,75,1330	0/0:34,0:34:96.31:0,96,1699	0/0:22,0:22:66.20:0,66,1156	0/0:25,0:25:63.22:0,63,1128	0/0:13,0:13:39.13:0,39,699	0/0:36,0:36:96.33:0,96,1746	0/0:16,0:16:48.16:0,48,861	0/0:19,0:19:45.15:0,45,812	0/0:27,0:27:78.21:0,78,1354	0/0:21,0:21:57.18:0,57,1008	0/0:23,0:23:63.22:0,63,1141	0/0:33,0:33:96.28:0,96,1681	0/0:15,0:15:45.15:0,45,818
chr10	12913491	.	TC	T	6130.88	PASS	AB=0.682;AC=34;AF=0.607;AN=56;BaseQRankSum=-1.850;DP=494;FS=10.244;HRun=10;HaplotypeScore=61.4753;InbreedingCoeff=0.6624;MQ=70.84;MQ0=0;MQRankSum=-1.108;QD=17.32;ReadPosRankSum=7.220;VQSLOD=4.2559;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:36.08:0,36,384	1/1:2,5:7:14.99:130,15,0	0/0:13,0:12:17.58:0,18,148	0/1:24,2:22:21.08:21,0,158	1/1:4,17:21:14.80:357,15,0	0/0:12,0:10:15.01:0,15,142	0/0:28,0:28:62.96:0,63,625	0/0:8,0:13:14.80:0,15,107	1/1:1,9:10:15:130,15,0	0/1:4,10:14:0.19:227,0,0	1/1:1,14:15:32.99:286,33,0	1/1:5,14:19:19.25:292,19,0	1/1:2,10:12:26.99:234,27,0	1/1:5,17:22:23.83:429,24,0	1/1:4,25:29:51.59:601,52,0	1/1:2,25:26:62.97:546,63,0	1/1:2,26:28:62.99:547,63,0	1/1:3,19:23:58.06:481,58,0	0/0:3,0:4:2.80:0,3,13	0/0:7,0:7:2.53:0,3,10	0/0:15,0:19:11.80:0,12,76	1/1:2,17:19:44.99:391,45,0	1/1:3,13:16:29.99:260,30,0	1/1:3,16:20:47.02:397,47,0	0/0:16,0:16:33.08:0,33,357	0/1:8,9:17:27.39:246,0,27	1/1:3,17:20:50.98:442,51,0	0/1:2,7:9:15.18:112,0,15
chr10	12916732	.	T	TAA	10438.92	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-5.657;DP=481;FS=16.320;HRun=11;HaplotypeScore=65.6317;InbreedingCoeff=0.9409;MQ=75.75;MQ0=1;MQRankSum=-2.486;QD=25.71;ReadPosRankSum=-1.448;VQSLOD=2.6892;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,111,1061	1/1:1,10:12:26.58:356,27,0	0/0:10,0:9:17.21:0,17,134	0/0:16,0:16:8.66:0,9,145	1/1:4,14:23:45.43:567,45,0	1/1:4,17:26:38.70:486,39,0	1/1:7,17:25:39.13:558,39,0	1/1:2,10:17:42.58:542,43,0	1/1:2,8:11:18.06:246,18,0	1/1:2,14:16:42.11:568,42,0	1/1:2,10:13:28.82:346,29,0	1/1:0,10:12:23.57:313,24,0	1/1:3,7:12:20.55:261,21,0	1/1:4,14:18:18.06:255,18,0	1/1:4,21:28:56.66:761,57,0	1/1:0,12:14:29.59:400,30,0	1/1:3,19:24:47.64:645,48,0	1/1:2,18:23:45.13:619,45,0	1/1:2,9:13:33.10:441,33,0	1/1:1,5:6:15.02:189,15,0	1/1:4,19:24:38.62:530,39,0	1/1:2,8:10:15:179,15,0	1/1:2,8:10:21.07:300,21,0	1/1:2,16:22:49.61:602,50,0	0/0:5,0:5:8.95:0,9,87	1/1:1,14:17:48.14:659,48,0	1/1:4,14:17:30.06:402,30,0	1/1:4,6:10:15.05:217,15,0
chr10	12918180	.	G	GA	769.78	PASS	AB=0.825;AC=11;AF=0.196;AN=56;BaseQRankSum=-2.923;DP=565;FS=3.420;HRun=15;HaplotypeScore=85.2959;InbreedingCoeff=-0.0602;MQ=73.06;MQ0=0;MQRankSum=-0.247;QD=4.21;ReadPosRankSum=-2.726;VQSLOD=1.0226;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,1:32:17.86:0,18,194	0/0:7,0:7:17.57:0,18,106	0/1:18,0:17:9.12:9,0,22	0/0:16,0:11:7.46:0,7,35	0/0:22,1:23:1.13:0,1,153	0/0:4,0:24:37.11:0,37,107	0/0:8,0:20:21.05:0,21,69	1/1:8,13:24:26.38:222,26,0	0/0:18,0:19:27.11:0,27,153	0/0:24,1:25:14.81:0,15,203	0/1:12,2:15:26.27:26,0,68	0/0:20,0:22:33.16:0,33,191	0/1:13,1:18:8.65:9,0,42	0/0:10,0:10:2.54:0,3,17	0/0:26,0:27:36.85:0,37,221	0/0:19,0:21:27.18:0,27,155	0/0:25,1:28:24.80:0,25,241	0/0:19,1:20:1.11:0,1,116	0/1:12,11:25:70.01:219,0,70	0/1:8,15:23:22.84:250,0,23	0/1:10,6:16:30.88:80,0,31	0/1:13,1:14:6.58:7,0,68	0/0:21,0:22:24.11:0,24,209	0/0:25,0:25:28.72:0,29,178	0/1:12,4:17:63.21:63,0,112	0/0:12,0:12:17.44:0,17,107	0/0:29,0:29:34.79:0,35,214	0/1:7,2:11:31.98:32,0,47
chr10	12918506	.	GGT	G	433.91	PASS	AB=0.940;AC=23;AF=0.411;AN=56;BaseQRankSum=0.978;DP=282;FS=4.279;HRun=0;HaplotypeScore=43.0999;InbreedingCoeff=-0.2309;MQ=72.18;MQ0=11;MQRankSum=-0.578;QD=2.17;ReadPosRankSum=0.018;VQSLOD=0.4169;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:9,0:9:13.22:33,0,13	1/1:5,0:4:3:25,3,0	0/1:28,0:13:23.91:24,0,98	0/1:18,0:6:25.78:27,0,26	0/0:8,0:7:3.85:0,4,26	0/1:15,0:15:0.98:1,0,42	0/0:28,0:27:19.78:0,20,108	0/0:7,0:6:5.98:0,6,52	0/1:7,1:8:23.54:24,0,53	0/0:7,1:7:5.94:0,6,54	0/1:4,0:4:17.28:17,0,17	1/1:9,0:7:15.11:89,15,0	0/1:12,0:12:3.12:91,0,3	0/1:2,2:4:18.48:18,0,19	0/1:7,3:10:46.65:47,0,47	0/1:3,0:3:0.28:0,0,20	0/1:18,1:19:34.61:35,0,61	0/1:9,0:9:16.61:25,0,17	0/1:14,1:15:5.19:5,0,160	0/1:7,0:7:1.49:9,0,1	0/0:13,0:12:22.93:0,23,165	0/1:5,1:6:14.29:44,0,14	0/0:5,0:5:4.97:0,5,40	0/1:3,0:3:16.54:17,0,17	0/0:5,0:5:5.96:0,6,46	0/0:7,1:8:1.68:0,2,55	0/1:9,1:10:3.44:48,0,3	1/1:5,0:3:1.82:5,2,0
chr10	12918508	.	TGGGG	T	1083.51	PASS	AB=0.679;AC=6;AF=0.107;AN=56;BaseQRankSum=-3.200;DP=274;FS=3.821;HRun=13;HaplotypeScore=48.9643;InbreedingCoeff=0.4081;MQ=74.38;MQ0=11;MQRankSum=-0.986;QD=18.36;ReadPosRankSum=4.414;VQSLOD=0.7843;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:12.01:0,12,151	0/0:5,0:4:2.99:0,3,24	0/0:29,0:15:14.92:0,15,166	0/0:20,0:7:10.52:0,11,154	0/0:5,0:5:3.47:0,3,26	1/1:3,10:14:36.03:461,36,0	1/1:6,21:26:48.09:700,48,0	0/0:6,0:5:0:0,0,0	0/0:7,0:8:1.19:0,1,14	0/0:8,0:7:5.97:0,6,46	0/0:1,0:3:8.85:0,9,59	0/0:7,0:7:15.87:0,16,126	0/0:11,0:11:20.76:0,21,164	0/0:3,0:3:3:0,3,28	0/0:8,0:10:11.74:0,12,73	0/0:1,0:2:2.92:0,3,17	0/0:11,0:19:20.59:0,21,143	0/0:1,0:8:8.83:0,9,56	0/1:10,1:12:1.70:43,0,2	0/1:0,0:6:1.08:1,0,8	0/0:13,0:15:9.95:0,10,91	0/0:7,0:7:8.88:0,9,66	0/0:3,0:5:0:0,0,0	0/0:3,0:3:5.93:0,6,55	0/0:4,0:4:3:0,3,26	0/0:6,0:8:5.44:0,5,65	0/0:8,0:9:14.66:0,15,88	0/0:1,0:3:2.92:0,3,17
chr10	12918520	.	GGA	G	197.12	PASS	AB=0.840;AC=9;AF=0.161;AN=56;BaseQRankSum=3.530;DP=278;FS=63.244;HRun=0;HaplotypeScore=47.3785;InbreedingCoeff=-0.1620;MQ=81.36;MQ0=5;MQRankSum=1.951;QD=2.82;ReadPosRankSum=6.568;VQSLOD=-0.5295;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:29.84:0,30,234	0/0:4,1:5:8.92:0,9,69	0/0:33,0:19:18.79:0,19,230	0/0:20,0:8:12.96:0,13,122	0/0:5,0:5:9.87:0,10,74	0/0:16,0:16:23.63:0,24,126	0/0:24,0:24:10.73:0,11,121	0/0:9,0:9:20.98:0,21,180	0/0:5,2:7:3.56:0,4,50	0/0:6,1:7:14.85:0,15,130	0/1:3,0:3:4.34:4,0,15	0/1:7,4:10:72.47:72,0,116	0/1:6,3:9:48.94:49,0,89	0/0:6,0:6:14.02:0,14,104	0/1:9,2:11:21.13:21,0,97	0/1:3,0:3:12.49:12,0,19	0/1:14,1:15:43.69:44,0,52	0/0:10,0:10:8.24:0,8,83	0/0:8,0:8:12.59:0,13,98	0/0:6,0:6:8.72:0,9,46	0/0:15,0:15:28.72:0,29,324	0/1:6,1:7:20.39:20,0,68	0/0:2,0:2:0.47:0,0,1	0/1:2,1:3:14.23:14,0,30	0/0:4,0:4:8.99:0,9,74	0/0:9,1:10:8.55:0,9,178	0/1:4,4:8:24.82:92,0,25	0/0:9,0:9:12.20:0,12,135
chr10	12919854	.	CA	C	592.04	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=3.225;DP=442;FS=2.616;HRun=9;HaplotypeScore=48.4946;InbreedingCoeff=0.9279;MQ=72.53;MQ0=0;MQRankSum=-0.641;QD=20.42;ReadPosRankSum=-0.244;VQSLOD=3.9757;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:60.18:0,60,688	0/0:3,0:3:9.03:0,9,103	0/0:15,0:15:15.26:0,15,320	0/0:10,0:8:9.35:0,9,102	0/0:16,0:16:42.12:0,42,485	1/1:0,9:9:24.01:220,24,0	1/1:2,18:20:54.03:493,54,0	0/0:25,0:25:66.17:0,66,748	0/0:17,0:17:39.09:0,39,437	0/0:17,0:17:45.13:0,45,519	0/0:5,0:5:15.04:0,15,173	0/0:19,0:19:48.14:0,48,554	0/0:13,0:14:41.96:0,42,464	0/0:15,0:15:42.11:0,42,473	0/0:23,0:23:60.18:0,60,689	0/0:17,0:17:39.06:0,39,422	0/0:26,0:26:69.20:0,69,796	0/0:16,0:16:45.13:0,45,519	0/0:16,0:16:39.07:0,39,421	0/0:14,0:14:33.09:0,33,372	0/0:14,0:14:33.10:0,33,381	0/0:15,0:15:36.06:0,36,400	0/0:16,0:16:39.11:0,39,440	0/0:24,0:24:57.17:0,57,658	0/0:9,0:9:27.04:0,27,297	0/0:14,0:14:33.09:0,33,373	0/0:19,0:19:54.16:0,54,622	0/0:11,0:11:27.08:0,27,311
chr10	12921572	.	G	GC	1090.87	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-8.732;DP=675;FS=0.000;HRun=8;HaplotypeScore=71.7553;InbreedingCoeff=0.9292;MQ=83.34;MQ0=0;MQRankSum=-2.822;QD=21.39;ReadPosRankSum=-0.468;VQSLOD=3.4643;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:90:0,90,814	0/0:5,0:5:15.01:0,15,137	0/0:25,0:25:30.77:0,31,430	0/0:18,0:18:35.85:0,36,319	0/0:14,0:14:36:0,36,325	1/1:3,13:16:5.56:302,6,0	1/1:6,29:35:78.23:900,78,0	0/0:15,0:15:29.99:0,30,268	0/0:26,0:26:45.66:0,46,587	0/0:23,0:23:60:0,60,542	0/0:17,0:17:48.02:0,48,436	0/0:25,0:25:69.02:0,69,631	0/0:21,0:21:60.03:0,60,549	0/0:31,0:31:81.02:0,81,737	0/0:30,0:30:84.03:0,84,764	0/0:25,0:25:69.03:0,69,631	0/0:46,0:46:99:0,120,1091	0/0:40,0:40:99:0,105,953	0/0:17,0:17:51.01:0,51,461	0/0:16,0:16:38.99:0,39,353	0/0:39,0:39:99:0,105,948	0/0:14,0:14:38.97:0,39,349	0/0:15,0:15:39:0,39,352	0/0:30,0:30:75:0,75,681	0/0:25,0:25:62.95:0,63,557	0/0:33,0:33:86.07:0,86,772	0/0:25,0:25:60:0,60,544	0/0:12,0:12:30.01:0,30,275
chr10	12922740	.	T	TCC	2936.53	PASS	AB=0.987;AC=34;AF=0.607;AN=56;BaseQRankSum=-2.285;DP=385;FS=2.596;HRun=1;HaplotypeScore=61.4392;InbreedingCoeff=-0.4979;MQ=48.61;MQ0=26;MQRankSum=4.319;QD=7.89;ReadPosRankSum=3.388;VQSLOD=0.7066;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:21,10:29:81.14:81,0,135	0/1:6,0:6:8.47:98,0,8	0/1:11,0:3:17.55:21,0,18	0/1:22,0:8:21.88:22,0,36	0/1:11,0:11:9.77:104,0,10	0/1:17,0:15:66.23:66,0,68	0/1:17,0:16:20.65:83,0,21	0/1:27,0:25:43.17:43,0,189	0/0:13,0:11:14.49:0,14,124	0/1:14,0:12:48.92:188,0,49	1/1:9,0:9:14.89:124,15,0	0/1:17,0:17:20.43:241,0,20	1/1:11,0:10:20.75:212,21,0	0/1:16,0:16:39.77:179,0,40	0/1:11,0:11:25.96:152,0,26	0/1:13,0:13:99:104,0,127	0/1:12,0:10:14.21:126,0,14	0/1:6,0:5:10.75:37,0,11	0/1:12,0:11:52.88:53,0,57	1/1:8,0:7:2.79:26,3,0	1/1:13,0:12:8.84:79,9,0	1/1:7,0:7:9.01:101,9,0	0/1:10,0:10:7.20:94,0,7	0/1:15,0:13:8.55:80,0,9	1/1:10,0:10:18.95:190,19,0	0/1:21,0:18:88.19:214,0,88	1/1:18,0:17:22.59:337,23,0	0/1:6,0:4:35.84:44,0,36
chr10	12923457	.	AC	A	1001.42	PASS	AB=0.947;AC=13;AF=0.232;AN=56;BaseQRankSum=0.817;DP=419;FS=11.275;HRun=9;HaplotypeScore=84.7167;InbreedingCoeff=0.8596;MQ=67.46;MQ0=4;MQRankSum=0.363;QD=9.54;ReadPosRankSum=1.341;VQSLOD=1.3396;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:39.51:0,40,413	0/0:4,0:4:7.57:0,8,52	0/0:27,0:17:21.20:0,21,322	0/0:32,0:20:32.52:0,33,361	0/0:12,0:13:6.71:0,7,42	1/1:3,7:9:14.93:127,15,0	1/1:7,11:18:20.51:190,21,0	1/1:15,11:26:30.74:345,31,0	0/0:14,0:14:27.08:0,27,310	0/0:16,0:16:36.10:0,36,407	0/1:17,1:18:3.46:3,0,208	0/0:16,0:16:29.90:0,30,298	0/0:6,0:6:9.03:0,9,104	0/0:10,0:10:14.91:0,15,154	0/0:15,0:14:12.04:0,12,138	0/0:13,0:13:27.91:0,28,290	0/0:16,0:16:32.57:0,33,315	0/0:11,0:11:27.05:0,27,292	1/1:3,6:9:24.01:219,24,0	1/1:1,5:6:18.01:164,18,0	1/1:7,11:17:14.99:137,15,0	0/0:21,0:21:18.80:0,19,401	0/0:7,0:7:15.02:0,15,157	0/0:22,0:21:15.02:0,15,160	0/0:10,0:10:18.05:0,18,208	0/0:18,0:18:36.56:0,37,396	0/0:12,0:12:24.04:0,24,263	0/0:12,0:12:24.91:0,25,254
chr10	12923529	.	CACACACACACACACAG	C	2681.90	PASS	AB=0.966;AC=28;AF=0.538;AN=52;BaseQRankSum=6.130;DP=425;FS=0.000;HRun=0;HaplotypeScore=213.5060;InbreedingCoeff=0.0068;MQ=39.62;MQ0=28;MQRankSum=-5.174;QD=10.35;ReadPosRankSum=-0.096;VQSLOD=1.9358;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:32:57.45:0,57,2058	1/1:2,0:2:3.01:94,3,0	0/0:25,0:8:17.22:0,17,208	0/0:28,0:15:44.77:0,45,474	./.	0/0:19,0:18:3.01:0,3,85	0/0:17,0:14:5.13:0,5,61	0/1:20,0:19:99:145,0,379	1/1:18,3:20:14.52:267,15,0	0/1:20,0:19:70.77:104,0,71	1/1:10,1:10:3.34:32,3,0	0/1:25,3:24:55.19:348,0,55	1/1:6,0:5:5.96:166,6,0	1/1:9,0:8:3.01:74,3,0	0/0:9,2:8:0.89:0,1,2	0/1:14,2:16:18.85:256,0,19	0/1:8,0:8:82.10:82,0,238	0/1:8,0:5:1.59:169,0,2	0/1:14,0:13:49.41:49,0,278	1/1:14,0:14:0.47:1,0,0	1/1:9,0:4:3.43:20,3,0	1/1:11,0:10:2.98:22,3,0	./.	1/1:17,0:14:3.01:72,3,0	0/0:15,0:14:27.02:0,27,777	0/1:15,0:14:8.81:250,0,9	0/1:18,1:17:39.24:439,0,39	0/1:10,1:11:18.94:245,0,19
chr10	12923535	.	CACACACACAG	C	2830.29	PASS	AB=1.000;AC=35;AF=0.673;AN=52;BaseQRankSum=8.344;DP=422;FS=3.503;HRun=0;HaplotypeScore=206.8981;InbreedingCoeff=0.2463;MQ=47.13;MQ0=21;MQRankSum=-7.901;QD=10.52;ReadPosRankSum=1.593;VQSLOD=2.7618;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:69.40:0,69,1452	1/1:2,0:2:3.01:91,3,0	0/0:32,0:14:32.42:0,32,375	0/0:34,0:21:59.79:0,60,599	./.	0/0:21,0:20:0.47:0,0,1	0/1:18,0:16:11.51:24,0,12	0/1:21,0:20:49.42:220,0,49	1/1:18,0:17:14.39:158,14,0	0/1:12,0:12:12.95:110,0,13	1/1:9,0:9:3.34:32,3,0	0/1:23,0:21:28.55:271,0,29	1/1:7,0:6:14.62:150,15,0	1/1:5,1:6:3.01:83,3,0	0/1:10,0:8:0:0,0,0	1/1:14,0:14:14.60:156,15,0	0/1:11,0:11:62.42:62,0,130	1/1:6,0:4:12.03:281,12,0	1/1:14,0:13:6.17:286,6,0	1/1:15,1:16:3.47:29,3,0	1/1:11,0:6:4.31:22,4,0	1/1:8,2:10:2.90:16,3,0	./.	1/1:13,2:13:2.99:52,3,0	0/0:15,0:14:27.02:0,27,500	1/1:15,0:15:18.90:243,19,0	0/1:17,0:16:6.54:388,0,7	1/1:14,0:14:32.63:318,33,0
chr10	12923537	.	CACACACAG	C	2884.49	PASS	AB=1.000;AC=37;AF=0.712;AN=52;BaseQRankSum=8.259;DP=415;FS=3.499;HRun=0;HaplotypeScore=201.2905;InbreedingCoeff=0.2615;MQ=49.95;MQ0=21;MQRankSum=-7.407;QD=10.27;ReadPosRankSum=1.399;VQSLOD=2.7370;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:71.90:0,72,1233	1/1:2,0:2:3.01:72,3,0	0/0:34,0:16:38.28:0,38,439	0/0:34,0:21:59.79:0,60,599	./.	1/1:19,0:18:1.82:5,2,0	0/1:17,0:15:11.51:43,0,12	0/1:17,0:16:21.91:239,0,22	1/1:16,2:17:14.50:140,14,0	0/1:12,0:12:7.79:110,0,8	1/1:7,0:7:3.45:23,3,0	0/1:19,0:19:16.43:235,0,16	1/1:7,0:6:14.62:134,15,0	1/1:6,0:6:3.01:60,3,0	0/1:10,0:8:0:0,0,0	1/1:14,0:14:16.93:137,17,0	0/1:11,0:11:55.62:56,0,93	1/1:5,1:4:12.04:263,12,0	1/1:13,1:13:27.80:408,28,0	1/1:15,0:15:2.99:24,3,0	1/1:11,0:6:4.31:22,4,0	0/1:11,0:11:3.29:18,0,3	./.	1/1:15,0:13:2.78:41,3,0	0/0:15,0:14:27:0,27,387	1/1:15,0:15:32.73:252,33,0	1/1:16,1:16:1.30:378,1,0	1/1:18,0:18:44.58:384,45,0
chr10	12923539	.	CACACAG	C	2841.04	PASS	AB=1.000;AC=37;AF=0.740;AN=50;BaseQRankSum=8.267;DP=420;FS=2.640;HRun=0;HaplotypeScore=197.5615;InbreedingCoeff=0.3602;MQ=53.45;MQ0=21;MQRankSum=-7.869;QD=10.33;ReadPosRankSum=0.940;VQSLOD=2.8956;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:68.91:0,69,1008	1/1:3,0:3:3.01:57,3,0	0/0:36,0:18:44.26:0,44,507	0/0:35,0:22:59.79:0,60,599	./.	1/1:17,0:16:2.98:22,3,0	0/1:18,0:16:16.62:17,0,27	1/1:21,0:20:10.77:318,11,0	1/1:18,0:17:14.62:124,15,0	0/1:13,0:13:0.38:128,0,0	1/1:7,0:7:3.47:29,3,0	0/1:18,0:18:4.45:237,0,4	1/1:7,0:6:14.66:121,15,0	1/1:6,0:6:3.01:51,3,0	./.	1/1:15,0:15:18.17:153,18,0	0/1:11,0:11:37.29:54,0,37	1/1:6,0:4:12.04:212,12,0	1/1:15,0:14:33.03:382,33,0	1/1:13,1:14:3:27,3,0	1/1:11,0:6:3.90:21,4,0	0/1:11,0:11:9.90:22,0,10	./.	1/1:14,1:13:2.74:38,3,0	0/0:15,0:14:24:0,24,290	1/1:14,0:14:32.73:253,33,0	1/1:16,1:16:21.53:363,22,0	1/1:18,0:18:44.60:371,45,0
chr10	12923541	.	CACAG	C	2741.89	PASS	AB=1.000;AC=39;AF=0.750;AN=52;BaseQRankSum=8.629;DP=427;FS=1.166;HRun=0;HaplotypeScore=199.4539;InbreedingCoeff=0.5901;MQ=55.03;MQ0=19;MQRankSum=-8.091;QD=10.55;ReadPosRankSum=0.460;VQSLOD=3.1658;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:68.85:0,69,757	1/1:3,0:3:3.01:46,3,0	0/0:37,0:19:47.26:0,47,533	0/0:36,0:23:62.80:0,63,636	./.	1/1:17,0:16:2.94:18,3,0	0/0:19,0:17:1.59:0,2,30	1/1:21,0:20:31.72:340,32,0	1/1:18,0:17:14.64:110,15,0	1/1:15,0:15:16.01:177,16,0	1/1:7,0:7:2.60:10,3,0	1/1:16,2:18:7.48:245,7,0	1/1:7,0:6:14.83:124,15,0	1/1:7,0:7:3.01:50,3,0	0/0:11,0:9:2.99:0,3,24	1/1:17,0:17:23.63:180,24,0	0/1:11,0:11:1.41:58,0,1	1/1:4,1:4:11.87:135,12,0	1/1:15,0:14:34.04:329,34,0	1/1:13,0:13:2.74:13,3,0	1/1:10,0:6:2.75:19,3,0	1/1:11,0:11:0.32:7,0,0	./.	1/1:14,1:13:2.47:15,2,0	0/0:14,0:13:26.97:0,27,267	1/1:13,1:14:32.73:272,33,0	1/1:17,1:17:41.43:366,41,0	1/1:16,2:18:44.60:390,45,0
chr10	12923543	.	CAG	C	2618.13	PASS	AB=1.000;AC=35;AF=0.673;AN=52;BaseQRankSum=8.031;DP=424;FS=0.000;HRun=0;HaplotypeScore=195.3763;InbreedingCoeff=0.6686;MQ=56.57;MQ0=17;MQRankSum=-8.772;QD=11.43;ReadPosRankSum=-0.078;VQSLOD=3.3214;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:59.86:0,60,558	1/1:2,1:3:3.01:32,3,0	0/0:37,0:19:47.27:0,47,533	0/0:37,0:24:62.80:0,63,636	./.	0/0:17,0:16:2.22:0,2,7	0/0:19,0:18:8.38:0,8,45	1/1:21,0:20:47.91:407,48,0	1/1:17,0:16:14.75:97,15,0	1/1:15,0:15:29.64:205,30,0	1/1:7,0:7:2.97:21,3,0	1/1:16,2:18:19:204,19,0	1/1:7,1:7:17.76:130,18,0	1/1:7,0:7:3:26,3,0	0/0:10,0:9:2.74:0,3,12	1/1:16,1:17:23.64:195,24,0	1/1:11,0:11:11.36:72,11,0	1/1:5,0:4:9.48:81,9,0	1/1:14,1:14:34.80:315,35,0	1/1:13,0:13:2.98:22,3,0	1/1:10,0:6:3.36:20,3,0	0/1:11,0:11:6.18:15,0,6	./.	0/0:14,0:13:2.47:0,2,12	0/0:14,0:13:24.87:0,25,224	1/1:15,0:15:35.74:281,36,0	1/1:17,1:17:41.35:298,41,0	1/1:16,2:18:44.68:372,45,0
chr10	12923572	.	C	CCTAATTGTGGTGTTT	48687.36	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-6.204;DP=576;FS=2.465;HRun=0;HaplotypeScore=175.0895;InbreedingCoeff=0.9473;MQ=77.23;MQ0=0;MQRankSum=-14.259;QD=107.48;ReadPosRankSum=2.958;VQSLOD=4.5592;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:93.27:0,93,3608	1/1:0,5:6:15.05:1129,15,0	0/0:33,0:30:83.76:0,84,2718	0/0:40,0:37:95.27:0,95,3328	1/1:1,6:22:18.06:1330,18,0	1/1:2,14:22:42.14:3013,42,0	1/1:1,9:25:27.09:2032,27,0	1/1:0,2:25:75.18:3194,75,0	1/1:5,11:25:45.07:3279,45,0	1/1:0,12:24:56.74:3646,57,0	1/1:2,8:17:27.56:1990,28,0	1/1:5,10:24:38.84:2396,39,0	1/1:1,6:16:21.07:1453,21,0	1/1:2,3:10:14.98:840,15,0	1/1:4,10:22:36.12:2533,36,0	1/1:2,9:29:32.71:2374,33,0	1/1:1,4:13:15.05:1130,15,0	1/1:5,1:7:14.91:710,15,0	1/1:1,2:15:42.06:1648,42,0	1/1:1,9:17:33.08:2232,33,0	1/1:0,2:10:6.02:443,6,0	1/1:2,10:16:35.97:2159,36,0	1/1:1,6:20:20.99:1203,21,0	1/1:3,5:20:17.89:873,18,0	0/0:17,0:17:51.15:0,51,1931	1/1:0,8:21:42.53:2705,43,0	1/1:3,12:23:42.11:2955,42,0	1/1:5,14:23:53.99:3421,54,0
chr10	12923919	.	TA	T	6999.76	PASS	AB=0.714;AC=42;AF=0.750;AN=56;BaseQRankSum=-1.680;DP=609;FS=2.786;HRun=12;HaplotypeScore=70.8646;InbreedingCoeff=0.3894;MQ=70.28;MQ0=1;MQRankSum=-1.187;QD=13.64;ReadPosRankSum=4.097;VQSLOD=5.4276;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:28:68.95:0,69,673	1/1:1,11:13:34.91:261,35,0	0/0:28,0:21:19.36:0,19,255	0/1:15,1:14:12.16:12,0,139	0/1:9,13:22:19.25:225,0,19	0/0:18,0:17:4.71:0,5,13	0/1:14,0:14:4.75:5,0,21	1/1:7,17:24:41.69:322,42,0	1/1:3,17:21:3.95:305,4,0	1/1:8,31:40:88.66:678,89,0	1/1:4,9:13:7.25:165,7,0	1/1:3,27:31:64.79:493,65,0	1/1:4,17:21:41.83:325,42,0	1/1:5,10:15:2.28:193,2,0	1/1:4,13:18:10.43:254,10,0	1/1:4,18:23:46.82:354,47,0	1/1:1,7:8:14.94:116,15,0	1/1:1,20:21:59.77:464,60,0	1/1:6,17:23:25.33:366,25,0	0/1:3,15:18:8.43:225,0,8	1/1:4,19:24:46.81:354,47,0	1/1:5,18:23:38.73:297,39,0	1/1:5,19:25:41.49:324,41,0	1/1:4,19:25:57.86:430,58,0	0/0:21,1:21:33.85:0,34,516	1/1:8,21:31:57.79:429,58,0	0/1:7,19:27:8.04:301,0,8	0/1:5,10:16:23.29:99,0,23
chr10	12923930	.	AAC	A	697.85	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=1.687;DP=602;FS=1.193;HRun=0;HaplotypeScore=101.7090;InbreedingCoeff=0.9446;MQ=74.66;MQ0=1;MQRankSum=0.300;QD=22.51;ReadPosRankSum=-0.635;VQSLOD=3.7692;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:71.24:0,71,1053	0/0:12,0:12:20.23:0,20,137	0/0:29,0:22:19.76:0,20,423	0/0:21,0:18:13.89:0,14,375	0/0:21,0:21:48.79:0,49,394	1/1:0,15:14:30.10:402,30,0	1/1:2,14:16:32.97:417,33,0	0/0:30,0:30:85.19:0,85,677	0/0:23,0:23:53.60:0,54,314	0/0:38,0:38:98.36:0,98,582	0/0:17,0:17:26.80:0,27,280	0/0:30,0:30:55.48:0,55,342	0/0:19,0:19:45.58:0,46,239	0/0:15,0:15:19.60:0,20,208	0/0:16,0:16:35.74:0,36,235	0/0:23,0:23:50.68:0,51,322	0/0:8,0:8:17.25:0,17,88	0/0:22,0:22:63.02:0,63,330	0/0:21,0:21:59.62:0,60,360	0/0:19,0:19:31.11:0,31,255	0/0:24,0:24:50.72:0,51,335	0/0:20,0:20:47.88:0,48,235	0/0:23,0:23:44.76:0,45,252	0/0:25,0:25:54.92:0,55,370	0/0:22,0:21:66.05:0,66,934	0/0:29,0:29:65.73:0,66,450	0/0:25,0:25:44.02:0,44,339	0/0:14,0:14:8.55:0,9,172
chr10	12925314	.	GGGTGACAAA	G	3416.31	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=10.290;DP=770;FS=3.759;HRun=0;HaplotypeScore=206.9547;InbreedingCoeff=0.9901;MQ=88.48;MQ0=0;MQRankSum=-6.858;QD=43.24;ReadPosRankSum=-2.437;VQSLOD=2.9623;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,163,7462	0/0:10,0:10:30.10:0,30,1467	0/0:34,0:35:99:0,99,3772	0/0:24,0:24:66.23:0,66,3013	0/0:21,0:21:60.21:0,60,2704	0/0:29,0:29:84.29:0,84,3982	0/0:36,0:36:99:0,108,4933	1/1:5,18:23:54.15:1491,54,0	0/0:32,0:32:96.33:0,96,4587	0/0:30,0:30:90.31:0,90,4140	0/0:17,0:17:48.16:0,48,2306	0/0:28,0:28:84.29:0,84,4026	0/0:22,0:22:57.20:0,57,2700	0/0:32,0:32:93.30:0,93,3929	0/0:32,0:32:90.31:0,90,4383	0/0:33,0:33:93.31:0,93,4136	0/0:39,0:39:99:0,117,5464	0/0:23,0:23:69.24:0,69,3152	1/1:4,11:15:33.11:834,33,0	1/1:5,14:19:24.08:721,24,0	1/1:11,11:22:11.78:370,12,0	0/0:29,0:29:87.30:0,87,4177	0/0:22,0:22:60.21:0,60,2805	0/0:42,0:42:99:0,126,5437	0/0:28,0:28:81.28:0,81,3886	0/0:36,0:36:99:0,102,4982	0/0:23,0:23:69.24:0,69,3358	0/0:13,0:13:39.13:0,39,1912
chr10	12925851	.	TGG	T	583.82	PASS	AB=0.900;AC=5;AF=0.104;AN=48;BaseQRankSum=1.403;DP=341;FS=17.922;HRun=12;HaplotypeScore=49.6240;InbreedingCoeff=0.5913;MQ=72.53;MQ0=0;MQRankSum=0.542;QD=10.81;ReadPosRankSum=6.010;VQSLOD=0.1914;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:18:16.35:0,16,144	./.	0/0:7,0:7:5.95:0,6,49	0/0:12,0:11:10.66:0,11,162	0/0:7,0:8:5.51:0,6,53	1/1:5,10:15:18.03:183,18,0	1/1:7,22:30:25.96:516,26,0	0/0:7,0:9:2.97:0,3,20	0/0:9,0:12:17.48:0,17,136	0/0:12,0:13:9.68:0,10,60	./.	0/0:17,0:18:23.30:0,23,163	0/0:7,0:8:14.50:0,14,143	0/0:12,0:12:6.89:0,7,71	0/0:13,0:15:18.88:0,19,199	0/0:8,0:8:15.03:0,15,187	0/0:21,0:22:22.69:0,23,220	0/0:24,0:26:47.53:0,48,501	0/1:7,0:9:0.15:0,0,87	./.	0/0:28,0:29:31.27:0,31,283	0/0:4,0:5:8.42:0,8,52	./.	0/0:22,0:22:47.56:0,48,534	0/0:6,0:7:12.46:0,12,104	0/0:11,0:11:9.47:0,9,77	0/0:8,0:10:13.96:0,14,89	0/0:5,0:6:8.49:0,8,76
chr10	12926562	.	G	GAAGAAAGAAAGA	8521.28	PASS	AB=0.697;AC=43;AF=0.827;AN=52;BaseQRankSum=-5.348;DP=448;FS=30.144;HRun=0;HaplotypeScore=131.2592;InbreedingCoeff=0.3255;MQ=51.96;MQ0=2;MQRankSum=-2.439;QD=22.31;ReadPosRankSum=-3.564;VQSLOD=1.3330;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:8,0:20:18.85:19,0,111	1/1:7,0:7:9.03:396,9,0	./.	./.	1/1:13,10:29:27.09:1252,27,0	0/0:20,0:20:29.97:0,30,793	0/0:18,0:18:27.04:0,27,706	1/1:23,0:23:17.96:171,18,0	1/1:4,1:8:3.01:174,3,0	1/1:8,0:18:26.64:924,27,0	1/1:8,0:14:12.04:324,12,0	1/1:5,3:12:9.03:522,9,0	1/1:11,0:11:6.02:236,6,0	1/1:7,2:10:3.01:174,3,0	1/1:6,4:16:9.03:522,9,0	1/1:8,0:8:6.02:275,6,0	1/1:13,2:19:3.01:174,3,0	1/1:16,3:26:3.01:174,3,0	0/1:12,0:16:7.16:30,0,7	1/1:9,0:22:4.58:168,5,0	0/0:6,0:12:5.89:0,6,14	1/1:4,1:8:3.01:174,3,0	1/1:14,0:14:10.38:211,10,0	1/1:12,1:13:12.04:340,12,0	0/1:13,0:21:8.71:44,0,9	1/1:8,7:26:48.06:1536,48,0	1/1:13,0:27:8.81:402,9,0	1/1:5,1:10:6.02:279,6,0
chr10	12927642	.	GA	G	687.99	PASS	AB=0.895;AC=5;AF=0.089;AN=56;BaseQRankSum=4.409;DP=541;FS=6.962;HRun=11;HaplotypeScore=73.7991;InbreedingCoeff=0.6938;MQ=74.97;MQ0=0;MQRankSum=1.450;QD=11.47;ReadPosRankSum=-0.882;VQSLOD=2.8822;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,2:40:71.56:0,72,951	0/0:7,0:7:15.04:0,15,160	0/1:15,2:17:22.74:23,0,64	0/0:11,0:11:6.69:0,7,100	0/0:8,0:8:18.05:0,18,192	1/1:3,13:16:35.95:296,36,0	1/1:4,23:27:61.94:499,62,0	0/0:19,1:20:14.45:0,14,359	0/0:15,1:16:17.46:0,17,391	0/0:9,0:10:18.52:0,19,192	0/0:12,0:12:24.06:0,24,256	0/0:32,0:33:73.25:0,73,741	0/0:25,0:25:54.07:0,54,552	0/0:23,1:24:26.47:0,26,479	0/0:20,0:20:54.12:0,54,568	0/0:17,0:17:39.08:0,39,404	0/0:34,0:34:90.14:0,90,929	0/0:26,1:27:44.43:0,44,663	0/0:21,0:22:48.83:0,49,489	0/0:10,0:10:18.93:0,19,191	0/0:38,1:40:68.40:0,68,913	0/0:10,0:10:18.05:0,18,192	0/0:7,0:7:12.03:0,12,128	0/0:37,0:36:62.29:0,62,773	0/0:11,0:12:14.21:0,14,186	0/0:15,0:15:39.10:0,39,416	0/0:19,0:19:42.07:0,42,435	0/0:4,0:4:9.02:0,9,96
chr10	12927667	.	G	GGGCACGGT	7367.46	PASS	AB=0.960;AC=32;AF=0.667;AN=48;BaseQRankSum=-5.132;DP=499;FS=6.215;HRun=0;HaplotypeScore=148.6990;InbreedingCoeff=0.6676;MQ=60.26;MQ0=1;MQRankSum=-2.297;QD=21.23;ReadPosRankSum=-1.663;VQSLOD=3.4171;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:18.06:0,18,429	1/1:8,0:8:6.02:93,6,0	0/0:10,0:7:0:0,0,0	./.	0/1:7,0:7:0:0,0,0	0/0:9,0:11:6.02:0,6,110	0/0:19,0:24:18.06:0,18,332	./.	1/1:13,6:19:24.08:942,24,0	1/1:13,0:13:12.04:391,12,0	./.	1/1:27,5:34:33.11:1266,33,0	1/1:16,3:20:12.04:398,12,0	1/1:18,3:23:14.61:599,15,0	1/1:16,0:16:12.03:297,12,0	1/1:15,3:18:9.03:358,9,0	1/1:30,6:37:17.87:726,18,0	0/1:20,2:23:0.38:391,0,0	0/0:16,0:19:11.24:0,11,143	0/0:6,0:8:3.01:0,3,56	1/1:35,0:35:0.36:1,0,0	1/1:9,0:9:3:25,3,0	./.	1/1:32,7:39:21.07:774,21,0	0/0:10,0:10:12.04:0,12,287	1/1:15,1:18:9:261,9,0	1/1:13,8:21:19.78:727,20,0	1/1:6,0:6:3.01:121,3,0
chr10	12929281	.	TTTTTTTTTC	T	924.20	PASS	AB=0.968;AC=16;AF=0.286;AN=56;BaseQRankSum=7.601;DP=441;FS=47.487;HRun=0;HaplotypeScore=101.7825;InbreedingCoeff=-0.0993;MQ=55.54;MQ0=15;MQRankSum=-3.589;QD=4.94;ReadPosRankSum=5.993;VQSLOD=-0.3251;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:22:54.70:0,55,1254	0/1:6,0:6:5.16:97,0,5	0/0:40,0:10:9.93:0,10,108	0/0:34,0:13:25.41:0,25,215	0/0:14,0:14:14.46:0,14,94	0/0:22,0:21:11.08:0,11,174	0/0:18,0:18:32.48:0,32,461	0/1:15,1:14:42.62:43,0,129	0/1:13,0:13:79.97:143,0,80	0/0:11,0:10:14.91:0,15,114	0/1:9,0:9:0.88:1,0,42	0/0:15,0:15:24.06:0,24,194	0/1:9,3:12:46.16:46,0,134	0/0:12,0:12:15.92:0,16,113	0/1:14,1:13:99:145,0,129	0/1:15,1:16:51.37:239,0,51	0/1:21,0:21:99:153,0,100	0/0:27,0:27:46.52:0,47,300	0/1:23,0:22:34.15:34,0,230	0/0:5,0:4:3.43:0,3,21	0/1:13,0:13:17.70:18,0,99	1/1:8,0:7:5.61:87,6,0	1/1:3,0:3:1.81:4,2,0	0/0:21,0:21:29.60:0,30,214	0/0:7,0:7:15.91:0,16,347	0/1:16,0:16:4:4,0,122	0/1:16,0:16:61.57:62,0,142	0/0:5,0:5:14.94:0,15,114
chr10	12929293	.	TCCTG	T	125.79	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=2.711;DP=378;FS=0.000;HRun=0;HaplotypeScore=65.0423;InbreedingCoeff=0.5023;MQ=58.60;MQ0=9;MQRankSum=-1.910;QD=3.23;ReadPosRankSum=1.763;VQSLOD=1.3554;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:22:47.44:0,47,990	0/0:4,0:4:2.97:0,3,20	0/0:40,0:14:18.06:0,18,416	0/0:35,0:18:13.92:0,14,271	0/0:7,0:7:9.03:0,9,188	1/1:5,8:13:9.03:132,9,0	1/1:15,0:15:6.02:94,6,0	0/0:14,0:13:20.49:0,20,374	0/0:15,0:15:29.23:0,29,557	0/0:6,0:5:6.02:0,6,143	0/0:3,0:3:5.61:0,6,81	0/0:13,0:13:29.46:0,29,575	0/0:12,0:12:18.24:0,18,441	0/0:8,0:8:15.05:0,15,336	0/0:14,0:14:29.92:0,30,557	0/0:16,0:16:24.53:0,25,400	0/0:20,0:20:35.90:0,36,621	0/0:23,0:23:42.14:0,42,876	0/0:17,0:16:18.05:0,18,327	0/0:2,0:2:3.90:0,4,54	0/1:11,0:11:8.12:8,0,566	0/0:3,0:2:1.25:0,1,3	0/0:5,0:5:12.04:0,12,285	0/0:15,0:15:33.10:0,33,648	0/0:9,0:9:21.05:0,21,397	0/0:15,0:15:30.09:0,30,630	0/0:15,0:15:33.10:0,33,671	0/0:5,0:5:9.03:0,9,195
chr10	12933397	.	CCA	C	1200.93	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.973;DP=599;FS=6.967;HRun=0;HaplotypeScore=76.0730;InbreedingCoeff=0.9896;MQ=70.52;MQ0=1;MQRankSum=-5.419;QD=34.31;ReadPosRankSum=-0.887;VQSLOD=5.1717;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,129,2390	0/0:5,0:5:15.05:0,15,280	0/0:23,0:23:35.26:0,35,1087	0/0:16,0:15:42.12:0,42,724	0/0:9,0:8:24.08:0,24,439	1/1:0,19:19:54.18:794,54,0	1/1:0,16:16:36.12:529,36,0	0/0:28,0:28:84.27:0,84,1532	0/0:21,0:21:60.19:0,60,1090	0/0:12,0:12:33.09:0,33,584	0/0:19,0:17:48.16:0,48,897	0/0:28,0:28:84.27:0,84,1521	0/0:26,0:26:78.23:0,78,1395	0/0:16,0:16:48.16:0,48,889	0/0:26,0:26:75.26:0,75,1402	0/0:20,0:20:60.19:0,60,1090	0/0:33,0:33:84.27:0,84,1514	0/0:11,0:11:33.11:0,33,618	0/0:22,0:22:47.21:0,47,1066	0/0:14,0:12:36.12:0,36,673	0/0:49,0:49:99:0,141,2638	0/0:16,0:16:42.14:0,42,785	0/0:13,0:11:30.10:0,30,560	0/0:29,0:29:87.30:0,87,1628	0/0:16,0:16:45.12:0,45,803	0/0:43,0:43:99:0,120,2216	0/0:15,0:15:45.15:0,45,837	0/0:9,0:9:27.09:0,27,493
chr10	12934326	.	GTTTTTGTT	G	1576.76	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.839;DP=590;FS=3.985;HRun=0;HaplotypeScore=144.6547;InbreedingCoeff=0.9781;MQ=70.43;MQ0=0;MQRankSum=-7.505;QD=41.49;ReadPosRankSum=-0.342;VQSLOD=3.3241;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,120,4860	0/0:9,0:9:21.04:0,21,587	0/0:17,0:13:36.11:0,36,1237	0/0:17,0:18:11.66:0,12,855	0/0:10,0:10:24.08:0,24,987	1/1:4,14:18:33.11:824,33,0	1/1:6,14:20:36.05:874,36,0	0/0:32,0:32:78.25:0,78,3011	0/0:17,0:17:51.18:0,51,2069	0/0:29,0:29:63.22:0,63,2552	0/0:20,0:20:45.15:0,45,1717	0/0:24,0:24:63.19:0,63,2259	0/0:22,0:22:45.15:0,45,1867	0/0:17,0:17:39.13:0,39,1566	0/0:19,0:18:48.15:0,48,1711	0/0:18,0:18:51.16:0,51,2052	0/0:31,0:32:84.29:0,84,3432	0/0:28,0:28:78.27:0,78,3198	0/0:23,0:23:48.16:0,48,1773	0/0:19,0:19:42.14:0,42,1588	0/0:24,0:24:72.23:0,72,2833	0/0:20,0:20:54.19:0,54,2222	0/0:11,0:11:27.09:0,27,1091	0/0:25,0:25:72.25:0,72,2839	0/0:18,0:18:51.18:0,51,1968	0/0:34,0:34:93.32:0,93,3742	0/0:14,0:13:36.11:0,36,1377	0/0:9,0:9:24.06:0,24,758
chr10	12935782	.	A	AG	26765.39	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-12.954;DP=713;FS=3.906;HRun=0;HaplotypeScore=63.5470;InbreedingCoeff=0.9996;MQ=77.46;MQ0=0;MQRankSum=-3.931;QD=45.06;ReadPosRankSum=2.294;VQSLOD=5.2185;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:67,0:67:99:0,202,2793	1/1:0,19:19:57.19:910,57,0	0/0:17,0:16:48.16:0,48,657	0/0:16,0:15:31.21:0,31,416	1/1:0,26:26:75.26:1195,75,0	1/1:0,28:28:81.28:1295,81,0	1/1:0,37:38:99:1761,111,0	1/1:0,34:34:99:1601,102,0	1/1:2,20:22:48.16:767,48,0	1/1:3,26:29:78.27:1238,78,0	1/1:0,14:14:42.14:671,42,0	1/1:0,32:32:93.32:1486,93,0	1/1:0,15:15:42.14:671,42,0	1/1:1,20:21:54.18:854,54,0	1/1:1,17:18:51.17:815,51,0	1/1:0,23:23:69.24:1103,69,0	1/1:1,35:36:93.32:1487,93,0	1/1:0,22:22:60.20:959,60,0	1/1:2,19:21:63.21:998,63,0	1/1:0,25:25:69.24:1103,69,0	1/1:2,36:38:99:1727,108,0	1/1:0,22:22:63.21:1007,63,0	1/1:0,20:20:54.18:864,54,0	1/1:0,32:32:90.31:1439,90,0	0/0:19,0:19:57.19:0,57,797	1/1:1,29:30:90.31:1426,90,0	1/1:0,19:20:60.20:954,60,0	1/1:0,9:9:27.09:432,27,0
chr10	12936293	.	GA	G	950.55	PASS	AB=0.803;AC=9;AF=0.161;AN=56;BaseQRankSum=4.187;DP=559;FS=0.488;HRun=12;HaplotypeScore=67.5759;InbreedingCoeff=0.3362;MQ=60.73;MQ0=15;MQRankSum=-2.755;QD=6.60;ReadPosRankSum=-2.272;VQSLOD=1.7628;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:31:66.09:0,66,660	0/0:8,0:8:21.01:0,21,202	0/0:23,0:9:9.48:0,9,65	0/1:25,0:10:8.78:9,0,70	0/0:26,0:26:57.09:0,57,562	0/1:16,2:19:18.47:18,0,349	0/0:18,1:19:30.70:0,31,477	1/1:8,22:30:11.45:405,11,0	0/0:15,0:16:41.92:0,42,410	0/0:19,0:19:42.08:0,42,421	0/0:12,1:12:0.82:0,1,188	0/0:20,0:22:50.76:0,51,473	0/0:12,0:12:30.06:0,30,304	0/0:14,0:14:29.98:0,30,283	0/0:24,0:22:57.09:0,57,567	0/0:12,0:13:32.90:0,33,319	0/0:42,3:42:43.87:0,44,818	0/0:25,0:22:52.05:0,52,514	0/1:8,9:18:23.71:159,0,24	1/1:5,19:24:47:355,47,0	0/1:5,8:12:4.51:142,0,5	0/0:10,0:10:24.93:0,25,245	0/0:17,0:17:41.92:0,42,410	0/0:24,0:28:65.43:0,65,598	0/1:10,1:11:6.08:6,0,149	0/0:18,1:20:28.98:0,29,474	0/0:18,0:16:41.97:0,42,406	0/0:5,1:5:2.84:0,3,14
chr10	12936598	.	G	GGTGTGTGTGTGTGTGTGT	18942.17	PASS	AB=0.962;AC=49;AF=0.875;AN=56;BaseQRankSum=1.513;DP=660;FS=0.000;HRun=0;HaplotypeScore=288.9406;InbreedingCoeff=0.5682;MQ=57.30;MQ0=12;MQRankSum=-4.587;QD=34.13;ReadPosRankSum=-0.494;VQSLOD=3.0538;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:25:38.25:38,0,1654	1/1:7,3:12:2.70:254,3,0	0/0:52,0:23:12.03:0,12,174	0/0:38,0:20:9.90:0,10,248	1/1:23,0:22:6.02:283,6,0	1/1:27,0:26:18.06:650,18,0	1/1:39,0:38:24.08:967,24,0	1/1:27,0:23:24.07:741,24,0	1/1:28,0:28:18.06:734,18,0	1/1:27,0:26:29.69:1525,30,0	1/1:9,1:10:3.01:254,3,0	1/1:28,0:24:11.61:467,12,0	1/1:22,0:21:18.06:950,18,0	1/1:21,0:20:21.07:1117,21,0	1/1:20,3:25:18.06:1485,18,0	1/1:21,1:22:21.07:1088,21,0	1/1:30,0:30:28.65:1555,29,0	1/1:16,0:16:15.05:757,15,0	1/1:22,0:21:27.09:1069,27,0	1/1:13,0:13:3.01:41,3,0	1/1:10,0:8:3.48:43,3,0	1/1:22,0:22:9.02:474,9,0	1/1:6,2:9:6.02:465,6,0	1/1:28,0:28:14.01:849,14,0	0/0:15,0:15:33.11:0,33,1491	1/1:21,0:21:27.08:1453,27,0	1/1:28,1:27:18.06:887,18,0	1/1:9,0:8:18.06:798,18,0
chr10	12937203	.	CGT	C	3730.63	PASS	AB=0.792;AC=34;AF=0.630;AN=54;BaseQRankSum=-0.324;DP=442;FS=28.380;HRun=0;HaplotypeScore=73.9704;InbreedingCoeff=0.7029;MQ=62.49;MQ0=10;MQRankSum=4.183;QD=13.82;ReadPosRankSum=3.501;VQSLOD=1.1293;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,1:37:26.26:0,26,1007	1/1:1,1:2:3.01:35,3,0	0/0:24,0:11:13.72:0,14,110	0/0:27,0:16:13.21:0,13,204	1/1:6,12:18:12.03:139,12,0	./.	0/0:12,0:12:11.97:0,12,97	0/0:27,0:27:38.67:0,39,270	1/1:2,8:10:15.04:174,15,0	1/1:11,7:17:7.08:227,7,0	1/1:1,3:4:6.02:70,6,0	1/1:6,12:18:24.07:279,24,0	0/1:2,4:6:11.17:61,0,11	0/0:10,0:10:8.98:0,9,117	1/1:4,8:12:12.04:139,12,0	1/1:2,4:6:9.03:103,9,0	1/1:8,28:36:72.21:836,72,0	1/1:4,23:27:48.13:556,48,0	0/0:17,0:16:20.94:0,21,169	0/0:6,0:6:0:0,0,0	0/1:39,0:39:0.43:0,0,20	1/1:0,7:7:9.03:104,9,0	1/1:6,3:9:11.06:110,11,0	1/1:13,18:33:6.98:503,7,0	0/0:9,0:9:15.04:0,15,212	1/1:3,9:11:23.93:255,24,0	1/1:1,2:3:6.02:70,6,0	1/1:7,2:8:6.02:70,6,0
chr10	12937207	.	T	TGTGTGTGAGA	3943.29	PASS	AB=0.667;AC=9;AF=0.167;AN=54;BaseQRankSum=-3.161;DP=481;FS=14.825;HRun=0;HaplotypeScore=154.0232;InbreedingCoeff=0.7751;MQ=60.88;MQ0=12;MQRankSum=-6.456;QD=32.59;ReadPosRankSum=-4.536;VQSLOD=1.0464;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:91.18:0,91,2485	0/0:1,0:1:3.01:0,3,57	0/0:30,0:12:7.80:0,8,306	0/0:29,0:17:33.61:0,34,673	0/0:17,0:17:18.06:0,18,393	./.	1/1:12,0:12:14.72:283,15,0	1/1:35,0:35:87.28:2084,87,0	0/0:10,0:10:14.84:0,15,369	0/0:16,0:15:39.12:0,39,738	0/0:6,0:6:9.49:0,9,174	0/0:19,0:19:42.09:0,42,806	0/0:8,0:7:9.03:0,9,183	0/0:10,0:10:11.54:0,12,284	0/0:13,0:13:24.05:0,24,439	0/0:7,0:7:17.98:0,18,277	0/0:39,0:39:93.30:0,93,2077	0/0:27,0:27:54.19:0,54,1264	1/1:8,9:17:36.12:1272,36,0	0/1:4,4:8:0:0,0,0	1/1:16,25:48:4.66:304,5,0	0/0:7,0:7:9.03:0,9,206	0/0:8,0:8:11.69:0,12,374	0/0:32,0:33:69.24:0,69,1497	0/0:9,0:9:15.05:0,15,431	0/0:13,0:12:34.32:0,34,627	0/0:5,0:5:9.02:0,9,173	0/0:7,0:6:12.01:0,12,218
chr10	12937211	.	T	TGTGAGA	2567.33	PASS	AB=0.992;AC=5;AF=0.093;AN=54;BaseQRankSum=-0.707;DP=482;FS=12.629;HRun=0;HaplotypeScore=123.9804;InbreedingCoeff=0.2199;MQ=58.36;MQ0=13;MQRankSum=-5.548;QD=23.13;ReadPosRankSum=-0.186;VQSLOD=2.3859;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:96.09:0,96,2046	0/0:1,0:1:3.01:0,3,48	0/0:32,0:12:4.16:0,4,328	0/0:32,0:19:37.56:0,38,679	0/0:17,0:17:21.06:0,21,315	./.	1/1:4,10:18:14.08:531,14,0	0/1:35,0:35:99:1359,0,243	0/0:10,0:10:17.90:0,18,291	0/0:15,0:14:42.13:0,42,652	0/0:6,0:6:9.49:0,9,122	0/0:20,0:20:45.11:0,45,679	0/0:10,0:9:21.06:0,21,302	0/0:8,0:8:11.55:0,12,235	0/0:13,0:13:24.08:0,24,390	0/0:7,0:7:18.03:0,18,253	0/0:40,0:40:99:0,102,1575	0/0:26,0:26:56.91:0,57,910	0/1:16,0:14:34.87:644,0,35	0/0:8,0:8:2.95:0,3,20	0/1:41,1:42:12.54:152,0,13	0/0:7,0:7:9.03:0,9,145	0/0:8,0:8:20.97:0,21,310	0/0:33,0:33:72.25:0,72,1177	0/0:8,0:8:15.05:0,15,331	0/0:13,0:12:36.12:0,36,563	0/0:4,0:4:9.03:0,9,143	0/0:5,0:4:12.01:0,12,166
chr10	12937386	.	C	CTG	77.97	PASS	AB=0.951;AC=10;AF=0.192;AN=52;BaseQRankSum=1.791;DP=531;FS=11.963;HRun=0;HaplotypeScore=94.0021;InbreedingCoeff=0.1940;MQ=63.10;MQ0=18;MQRankSum=-1.000;QD=0.55;ReadPosRankSum=-0.201;VQSLOD=1.0073;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:20,13:33:4.90:75,0,5	0/0:6,0:6:11.93:0,12,89	./.	./.	0/1:15,0:13:12.60:13,0,33	1/1:17,0:17:5.99:49,6,0	1/1:25,0:24:3.93:26,4,0	0/0:27,0:25:2.92:0,3,17	0/0:14,0:14:14.76:0,15,105	0/1:12,0:11:7.74:8,0,61	0/1:7,0:7:14.96:15,0,39	0/0:29,0:29:23.70:0,24,165	0/0:19,0:17:5.09:0,5,128	0/0:13,0:13:8.97:0,9,70	0/0:15,0:13:8.93:0,9,64	0/0:12,0:12:6.85:0,7,46	0/0:26,0:26:25.06:0,25,195	0/0:35,0:34:35.56:0,36,254	0/0:10,0:10:8.90:0,9,61	0/0:6,0:11:2.84:0,3,14	0/0:27,0:26:18.47:0,18,110	0/0:7,0:6:3.46:0,3,25	0/0:12,0:12:7.67:0,8,42	0/0:36,0:35:41.74:0,42,307	0/1:9,0:9:0.44:16,0,0	0/1:22,0:22:7.34:7,0,73	0/0:22,0:21:14.56:0,15,95	0/0:7,0:7:17.25:0,17,105
chr10	12937946	.	AT	A	966.23	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.595;DP=781;FS=5.029;HRun=10;HaplotypeScore=77.8008;InbreedingCoeff=0.8914;MQ=63.91;MQ0=2;MQRankSum=-0.280;QD=18.23;ReadPosRankSum=-0.026;VQSLOD=4.2059;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,132,1451	0/0:8,0:8:21.04:0,21,222	0/0:14,0:12:26.87:0,27,258	0/0:12,0:9:1.25:0,1,156	0/0:31,1:32:46.14:0,46,737	1/1:2,28:29:74.98:651,75,0	1/1:3,20:23:23.83:436,24,0	0/0:46,0:46:99:0,110,1178	0/0:31,0:31:84.21:0,84,920	0/0:29,0:29:66.18:0,66,730	0/0:26,0:26:62.96:0,63,658	0/0:30,0:30:84.16:0,84,893	0/0:24,0:25:65.98:0,66,694	0/0:26,1:27:40.12:0,40,667	0/0:30,0:30:84.16:0,84,914	0/0:35,0:36:83.27:0,83,944	0/0:28,0:29:45.41:0,45,764	0/0:31,2:33:43.46:0,43,903	0/0:31,0:31:66.18:0,66,730	0/0:41,0:41:99:0,111,1194	0/0:25,0:25:69.13:0,69,749	0/0:22,0:22:45.10:0,45,481	0/0:22,0:22:57.15:0,57,630	0/0:30,0:30:83.62:0,84,903	0/0:24,1:25:39.99:0,40,631	0/0:23,1:24:30.14:0,30,569	0/0:30,0:30:87.17:0,87,932	0/0:20,0:20:57.15:0,57,630
chr10	12939832	.	GAA	G	8323.94	PASS	AB=0.833;AC=51;AF=0.944;AN=54;BaseQRankSum=1.237;DP=342;FS=7.570;HRun=3;HaplotypeScore=185.1393;InbreedingCoeff=0.3395;MQ=59.63;MQ0=0;MQRankSum=-3.444;QD=24.70;ReadPosRankSum=2.573;VQSLOD=3.3092;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,19:23:56.54:475,57,0	./.	0/0:5,0:5:1.72:0,2,64	0/1:8,2:10:13.11:87,0,13	1/1:2,8:10:4.83:39,5,0	1/1:1,6:7:20.77:166,21,0	1/1:0,17:18:54.04:523,54,0	1/1:1,14:15:45.13:509,45,0	1/1:0,14:14:42.07:418,42,0	1/1:0,10:11:29.64:293,30,0	1/1:1,3:4:7.81:35,8,0	1/1:3,24:27:81.09:798,81,0	1/1:1,16:17:50.92:473,51,0	1/1:2,14:16:43.21:405,43,0	1/1:0,11:11:33.04:321,33,0	1/1:1,24:25:75.17:790,75,0	1/1:0,13:13:29.94:307,30,0	1/1:0,14:14:42.13:507,42,0	1/1:0,14:13:30.02:323,30,0	1/1:0,6:6:11.01:70,11,0	1/1:2,10:12:22.73:211,23,0	1/1:0,6:6:14.91:127,15,0	1/1:0,4:5:11.78:91,12,0	1/1:1,14:15:23.04:190,23,0	1/1:0,6:6:17.52:147,18,0	1/1:1,11:13:33.09:360,33,0	1/1:4,14:18:50.43:464,50,0	1/1:0,6:6:18.05:196,18,0
chr10	12940000	.	TC	T	5245.09	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=16.175;DP=639;FS=1.519;HRun=4;HaplotypeScore=80.7507;InbreedingCoeff=0.9981;MQ=74.27;MQ0=0;MQRankSum=-0.067;QD=30.85;ReadPosRankSum=-0.279;VQSLOD=4.9836;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,120,1658	0/0:9,0:9:27.09:0,27,378	0/0:17,0:17:42.13:0,42,572	0/0:23,0:23:63.51:0,64,799	0/0:8,0:8:21.07:0,21,292	1/1:0,19:19:51.16:611,51,0	1/1:3,35:38:93.24:1099,93,0	1/1:1,23:24:69.17:796,69,0	0/0:9,0:9:24.08:0,24,335	0/0:21,0:21:63.18:0,63,859	0/0:11,0:11:27.09:0,27,377	0/0:26,0:26:66.18:0,66,900	0/0:27,0:27:69.23:0,69,962	0/0:21,0:21:57.18:0,57,781	0/0:22,0:22:63.21:0,63,881	0/0:34,0:34:96.32:0,96,1342	0/0:35,0:35:99:0,105,1447	0/0:32,0:32:96.32:0,96,1344	1/1:2,25:26:69.17:802,69,0	1/1:0,19:19:50.89:570,51,0	1/1:3,40:43:99:1367,114,0	0/0:18,0:18:54.18:0,54,746	0/0:11,0:11:33.11:0,33,461	0/0:32,0:32:93.29:0,93,1266	0/0:17,0:17:51.17:0,51,712	0/0:15,0:15:42.14:0,42,588	0/0:30,0:30:87.26:0,87,1180	0/0:9,0:9:27.09:0,27,378
chr10	12941685	.	A	AGG	2815.96	PASS	AB=1.000;AC=50;AF=0.962;AN=52;DP=171;FS=0.000;HRun=3;HaplotypeScore=167.0170;InbreedingCoeff=0.1999;MQ=41.47;MQ0=0;QD=16.56;VQSLOD=0.7180;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,0:5:8.70:97,9,0	./.	0/1:1,0:1:0:0,0,0	./.	0/1:2,0:2:0:0,0,0	1/1:6,0:6:16.25:135,16,0	1/1:19,1:20:49.40:455,49,0	1/1:8,0:8:18.01:187,18,0	1/1:9,0:9:21.38:182,21,0	1/1:6,0:6:12:122,12,0	1/1:2,0:2:3:26,3,0	1/1:9,0:9:15.01:147,15,0	1/1:6,1:7:17.69:151,18,0	1/1:11,0:11:16.07:122,16,0	1/1:1,0:1:3.01:33,3,0	1/1:6,0:6:18:201,18,0	1/1:5,0:5:11.98:99,12,0	1/1:7,0:7:9.88:79,10,0	1/1:6,0:6:3.33:26,3,0	1/1:2,0:2:3.46:25,3,0	1/1:23,1:24:21.10:237,21,0	1/1:4,0:4:7.26:74,7,0	1/1:3,0:3:2.92:17,3,0	1/1:9,1:10:18.10:184,18,0	1/1:4,0:4:6:54,6,0	1/1:6,0:6:14.81:129,15,0	1/1:2,0:2:3.47:27,3,0	1/1:4,0:4:9.01:85,9,0
chr10	12942646	.	ATTTG	A	11837.28	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=16.589;DP=521;FS=13.695;HRun=0;HaplotypeScore=102.0366;InbreedingCoeff=0.9919;MQ=78.36;MQ0=0;MQRankSum=-4.587;QD=41.53;ReadPosRankSum=6.193;VQSLOD=4.1047;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:96.32:0,96,2424	1/1:0,6:6:15.05:276,15,0	0/0:18,0:18:48.15:0,48,1099	0/0:13,0:13:27.09:0,27,682	0/0:11,0:11:33.11:0,33,843	0/0:28,0:28:75.25:0,75,1927	0/0:21,0:21:57.19:0,57,1323	0/0:42,0:42:99:0,108,2681	1/1:1,16:17:36.12:662,36,0	1/1:1,20:21:60.21:1082,60,0	1/1:1,9:10:24.08:441,24,0	1/1:2,9:11:24.08:441,24,0	1/1:0,14:14:39.13:697,39,0	1/1:0,6:6:12.04:220,12,0	1/1:3,24:27:63.21:1138,63,0	1/1:1,18:19:39.13:717,39,0	1/1:1,22:23:48.16:882,48,0	1/1:0,20:20:42.14:771,42,0	0/0:24,0:24:63.22:0,63,1636	0/0:8,0:8:24.07:0,24,582	0/0:20,0:20:60.21:0,60,1555	1/1:0,10:10:24.08:419,24,0	1/1:1,13:14:36.12:620,36,0	1/1:3,23:26:54.66:993,55,0	0/0:14,0:14:39.13:0,39,1030	1/1:1,16:17:48.09:803,48,0	1/1:2,23:25:54.19:992,54,0	1/1:2,17:19:39.13:683,39,0
chr10	12942786	.	TGGG	T	3732.40	PASS	AB=0.934;AC=35;AF=0.625;AN=56;BaseQRankSum=-0.815;DP=670;FS=0.464;HRun=3;HaplotypeScore=74.5231;InbreedingCoeff=-0.2002;MQ=39.69;MQ0=154;MQRankSum=1.524;QD=7.29;ReadPosRankSum=2.637;VQSLOD=-0.4227;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:23,3:21:99:124,0,101	0/1:9,2:8:0.14:82,0,0	0/0:61,0:12:15.59:0,16,353	0/0:85,0:9:13.05:0,13,155	0/1:28,0:24:37.39:134,0,37	1/1:21,0:17:10.24:76,10,0	0/1:25,0:16:8.21:107,0,8	1/1:32,9:34:21.84:560,22,0	0/1:19,0:10:23.16:38,0,23	0/1:31,1:20:56.78:131,0,57	0/1:20,0:18:11.11:164,0,11	0/1:8,0:7:2.25:107,0,2	1/1:4,4:7:6.49:82,6,0	1/1:8,9:14:7.68:103,8,0	0/1:16,1:11:19.66:118,0,20	1/1:13,1:11:8.95:111,9,0	0/1:30,4:19:79.45:224,0,79	1/1:20,3:13:28.46:203,28,0	1/1:16,7:19:2.07:407,2,0	1/1:12,0:7:12.57:158,13,0	1/1:8,2:7:2.23:80,2,0	0/1:5,4:8:18.47:80,0,18	0/1:13,1:12:10.97:67,0,11	0/1:21,1:12:18.29:91,0,18	0/0:11,0:6:1.55:0,2,21	0/1:30,2:22:76.43:237,0,76	1/1:22,0:14:17.44:224,17,0	0/1:20,0:12:23.85:24,0,109
chr10	12942787	.	GGGTTT	G	2455.12	PASS	AB=0.975;AC=36;AF=0.643;AN=56;BaseQRankSum=-0.903;DP=665;FS=13.362;HRun=0;HaplotypeScore=90.1528;InbreedingCoeff=-0.0409;MQ=38.37;MQ0=154;MQRankSum=1.676;QD=4.91;ReadPosRankSum=2.552;VQSLOD=0.4727;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:22:31.53:32,0,260	1/1:11,0:8:11.51:65,12,0	0/0:60,0:12:19.39:0,19,330	0/0:85,0:8:15.01:0,15,135	0/1:26,0:24:4.16:135,0,4	1/1:21,0:17:6.24:67,6,0	0/1:26,0:16:7.05:54,0,7	0/1:39,1:34:81.46:195,0,81	0/1:18,0:9:5.63:20,0,6	1/1:32,0:20:0.29:178,0,0	1/1:10,9:17:26.83:233,27,0	0/1:8,0:7:14.89:63,0,15	1/1:8,0:7:6.78:59,7,0	1/1:17,0:14:13.35:107,13,0	1/1:17,0:11:0:122,0,0	1/1:14,0:11:21.04:125,21,0	0/1:33,0:18:99:149,0,108	1/1:24,0:13:0.99:179,1,0	0/1:24,0:19:37.64:95,0,38	0/1:11,0:7:0.54:29,0,1	0/0:9,0:6:1.47:0,1,35	1/1:9,0:8:10.35:92,10,0	1/1:8,6:12:6.87:55,7,0	0/1:22,0:12:4.73:87,0,5	0/0:11,0:6:5.91:0,6,59	0/1:32,0:22:67.92:238,0,68	1/1:21,0:14:21.56:210,22,0	0/1:18,1:11:25.77:26,0,72
chr10	12942788	.	GGTTT	G	3535.34	PASS	AB=0.962;AC=45;AF=0.804;AN=56;BaseQRankSum=-2.752;DP=666;FS=2.231;HRun=0;HaplotypeScore=80.3205;InbreedingCoeff=0.2027;MQ=38.18;MQ0=159;MQRankSum=0.992;QD=5.93;ReadPosRankSum=-2.957;VQSLOD=1.2956;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:21:37.54:38,0,211	1/1:9,1:8:15.91:90,16,0	0/0:59,0:11:11.18:0,11,186	0/1:85,0:8:5:5,0,58	1/1:24,0:24:35.39:214,35,0	1/1:5,14:17:9.43:109,9,0	1/1:25,0:16:34.72:159,35,0	1/1:40,0:34:36:236,36,0	1/1:17,0:7:9.21:51,9,0	1/1:31,0:20:48.06:363,48,0	1/1:16,0:17:37.23:254,37,0	1/1:8,0:7:0.20:66,0,0	1/1:7,0:7:8.72:89,9,0	1/1:15,1:14:17.15:117,17,0	1/1:13,3:11:23.04:215,23,0	1/1:14,0:12:27.46:169,27,0	0/1:31,0:18:84.10:136,0,84	1/1:22,0:13:13.81:156,14,0	0/1:23,1:19:27.15:74,0,27	1/1:11,0:7:11.53:37,12,0	0/1:9,0:6:1.63:2,0,25	1/1:9,0:8:16.98:121,17,0	1/1:12,2:12:16.12:93,16,0	1/1:19,0:12:6.73:66,7,0	0/0:11,0:5:5.89:0,6,57	0/1:28,1:22:10.11:331,0,10	1/1:18,1:14:28.42:248,28,0	0/1:20,0:11:40.99:95,0,41
chr10	12943145	.	T	TTGTG	2596.22	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-0.966;DP=674;FS=0.557;HRun=0;HaplotypeScore=128.2298;InbreedingCoeff=0.9708;MQ=65.03;MQ0=1;MQRankSum=-1.945;QD=22.19;ReadPosRankSum=-2.489;VQSLOD=3.0880;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:69.21:0,69,1084	0/0:5,0:5:15.05:0,15,251	0/0:30,0:24:7.65:0,8,553	0/0:34,0:24:24.06:0,24,445	0/0:33,0:33:59.41:0,59,926	0/0:16,0:16:45.15:0,45,745	0/0:28,0:28:57.19:0,57,940	1/1:22,13:37:45.13:950,45,0	0/0:16,0:17:33.10:0,33,506	0/0:19,0:20:54.16:0,54,831	0/0:17,0:20:48.13:0,48,704	0/0:19,0:21:54.16:0,54,833	0/0:28,0:29:78.26:0,78,1277	0/0:9,0:9:24.06:0,24,369	0/0:21,0:21:54.17:0,54,878	0/0:27,0:27:66.22:0,66,1099	0/0:32,0:34:46.90:0,47,1254	0/0:28,0:28:35.34:0,35,975	1/1:14,10:25:35.80:659,36,0	1/1:6,10:19:18.06:398,18,0	1/1:14,16:36:35.59:749,36,0	0/0:19,0:19:42.10:0,42,670	0/0:23,0:23:54.08:0,54,804	0/0:28,0:28:72.23:0,72,1174	0/0:12,0:12:27.08:0,27,425	0/0:24,0:24:60.20:0,60,958	0/0:22,0:23:60.17:0,60,923	0/0:23,0:24:42.13:0,42,657
chr10	12943412	.	C	CA	1222.34	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=2.530;DP=563;FS=5.643;HRun=1;HaplotypeScore=66.3246;InbreedingCoeff=0.8384;MQ=63.80;MQ0=1;MQRankSum=-2.363;QD=33.95;ReadPosRankSum=0.359;VQSLOD=3.2979;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:84.27:0,84,1087	0/0:1,0:1:3.01:0,3,39	0/0:28,0:20:50.80:0,51,659	0/0:25,0:21:51.15:0,51,628	0/0:17,0:17:48.16:0,48,623	1/1:0,13:13:33.07:470,33,0	1/1:0,23:23:60.16:874,60,0	0/0:39,0:39:99:0,102,1294	0/0:16,0:16:45.14:0,45,576	0/0:10,0:10:27.09:0,27,351	0/0:6,0:6:18.06:0,18,234	0/0:21,0:21:57.17:0,57,725	0/0:12,0:12:30.10:0,30,389	0/0:19,0:19:42.12:0,42,531	0/0:33,0:33:84.26:0,84,1075	0/0:30,0:30:75.24:0,75,973	0/0:39,0:38:99:0,111,1423	0/0:26,0:26:72.19:0,72,914	0/0:24,0:23:66.19:0,66,839	0/0:10,0:10:30.10:0,30,389	0/0:36,0:36:90.14:0,90,1167	0/0:1,0:1:3.01:0,3,39	0/0:11,0:11:24.08:0,24,310	0/0:20,0:20:60.19:0,60,777	0/0:17,0:16:48.16:0,48,622	0/0:13,0:13:36.12:0,36,465	0/0:33,0:33:87.28:0,87,1129	0/0:12,0:12:23.85:0,24,311
chr10	12943497	.	CTTTCTTTCTTTCTTTCTTTCTTTCTTTT	C	2544.97	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=0.552;DP=528;FS=4.326;HRun=0;HaplotypeScore=356.8376;InbreedingCoeff=0.9338;MQ=58.42;MQ0=8;MQRankSum=-3.769;QD=94.26;ReadPosRankSum=1.925;VQSLOD=2.6041;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:69.23:0,69,6516	0/0:5,0:5:12.04:0,12,475	0/0:18,0:13:33.06:0,33,1060	0/0:12,0:7:11.25:0,11,472	0/0:33,0:33:78.25:0,78,3244	1/1:1,13:13:24.08:1794,24,0	1/1:0,13:13:12.04:867,12,0	0/0:24,0:23:60.21:0,60,3696	0/0:16,0:16:33.11:0,33,1374	0/0:23,0:23:65.89:0,66,2623	0/0:19,0:19:42.13:0,42,1572	0/0:14,0:13:24.08:0,24,1055	0/0:18,0:17:29.71:0,30,1164	0/0:12,0:12:30.09:0,30,1160	0/0:28,0:28:31.16:0,31,1582	0/0:21,0:21:42.10:0,42,1320	0/0:27,0:25:27.09:0,27,1138	0/0:26,0:26:42.08:0,42,1475	0/0:23,0:21:60.21:0,60,3414	0/0:19,0:19:45.15:0,45,2841	0/0:17,0:17:39.12:0,39,2041	0/0:9,0:9:18.05:0,18,654	0/0:15,0:15:27.10:0,27,999	0/0:10,0:10:15.04:0,15,421	0/0:17,0:17:48.16:0,48,5809	0/0:20,0:20:57.19:0,57,2479	0/0:26,0:26:42.02:0,42,1441	0/0:21,0:21:24.06:0,24,853
chr10	12943513	.	CTTTCTTTCTTTT	C	16129.88	PASS	AB=0.883;AC=42;AF=0.778;AN=54;BaseQRankSum=7.473;DP=467;FS=3.636;HRun=0;HaplotypeScore=149.2251;InbreedingCoeff=0.4467;MQ=49.52;MQ0=10;MQRankSum=-6.743;QD=40.84;ReadPosRankSum=2.635;VQSLOD=4.3277;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:54.15:0,54,2557	1/1:0,5:5:12.04:448,12,0	./.	0/0:9,0:3:3:0,3,26	1/1:0,28:28:65.79:1646,66,0	1/1:14,0:13:24.08:709,24,0	1/1:14,0:13:12.04:325,12,0	0/1:26,0:24:99:219,0,227	1/1:1,12:13:18.06:671,18,0	1/1:1,17:17:50.97:1244,51,0	1/1:0,16:16:35.78:951,36,0	1/1:0,15:14:12.03:362,12,0	1/1:0,14:13:27.09:1007,27,0	1/1:0,14:14:24.08:800,24,0	1/1:0,26:26:35.95:1159,36,0	1/1:0,16:16:30.10:1101,30,0	0/1:3,23:24:1.82:542,0,2	1/1:6,20:26:0.49:760,0,0	0/1:20,0:18:21.61:149,0,22	0/1:20,0:20:34.04:121,0,34	0/0:14,0:14:8.67:0,9,177	1/1:0,4:4:6.02:220,6,0	1/1:0,13:13:23.06:782,23,0	1/1:1,5:6:3.01:90,3,0	0/0:16,0:16:48.16:0,48,2583	1/1:3,17:20:51:1143,51,0	1/1:0,21:21:23.54:895,24,0	1/1:0,20:20:21.07:785,21,0
chr10	12943517	.	CTTTCTTTT	C	11429.05	PASS	AB=1.000;AC=46;AF=0.852;AN=54;BaseQRankSum=8.903;DP=444;FS=4.407;HRun=0;HaplotypeScore=140.1615;InbreedingCoeff=0.5832;MQ=46.42;MQ0=10;MQRankSum=-6.104;QD=29.23;ReadPosRankSum=-0.286;VQSLOD=4.5124;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:51.11:0,51,1703	1/1:5,0:5:12.04:254,12,0	./.	0/0:7,0:1:3.01:0,3,35	1/1:28,0:28:62.69:884,63,0	1/1:14,0:13:24.08:485,24,0	1/1:14,0:13:12.04:213,12,0	1/1:5,19:21:53.80:517,54,0	1/1:12,0:12:18.06:382,18,0	1/1:18,0:17:47.98:739,48,0	1/1:16,0:16:35.78:565,36,0	1/1:15,0:14:9.03:191,9,0	1/1:14,0:13:27.09:573,27,0	1/1:14,0:14:24.01:444,24,0	1/1:26,0:26:32.94:650,33,0	1/1:16,0:16:30.10:618,30,0	0/1:24,0:22:1.82:300,0,2	0/1:24,0:24:14.81:420,0,15	1/1:2,14:15:40.26:862,40,0	1/1:0,18:18:41.96:975,42,0	1/1:5,8:13:5.98:104,6,0	1/1:4,0:4:6.02:124,6,0	1/1:13,0:13:23.52:444,24,0	1/1:5,0:5:3.01:41,3,0	0/0:16,0:16:48.16:0,48,1807	1/1:17,0:17:48.01:690,48,0	1/1:21,0:21:23.76:509,24,0	1/1:20,0:20:21.07:446,21,0
chr10	12944220	.	GC	G	4027.85	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=10.284;DP=663;FS=7.270;HRun=1;HaplotypeScore=65.3793;InbreedingCoeff=0.9834;MQ=84.45;MQ0=0;MQRankSum=-0.465;QD=39.49;ReadPosRankSum=-0.593;VQSLOD=3.8122;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,162,2473	0/0:3,0:3:9.03:0,9,144	0/0:21,0:21:60.05:0,60,857	0/0:19,0:19:57.18:0,57,853	0/0:20,0:20:60.18:0,60,927	0/0:20,0:20:60.20:0,60,947	0/0:29,0:29:87.28:0,87,1363	1/1:0,21:21:60.18:805,60,0	0/0:18,0:18:54.17:0,54,837	0/0:22,0:22:66.22:0,66,1042	0/0:15,0:15:45.12:0,45,671	0/0:34,0:34:99:0,102,1599	0/0:18,0:18:54.18:0,54,858	0/0:23,0:23:66.21:0,66,1026	0/0:27,0:27:81.23:0,81,1223	0/0:20,0:20:60.16:0,60,918	0/0:43,0:43:99:0,129,2005	0/0:34,0:34:99:0,102,1589	1/1:0,14:14:42.12:567,42,0	1/1:0,14:14:39.09:517,39,0	1/1:0,53:53:99:2139,154,0	0/0:15,0:15:45.09:0,45,645	0/0:14,0:14:42.12:0,42,627	0/0:34,0:34:99:0,99,1528	0/0:15,0:15:42.14:0,42,671	0/0:30,0:30:81.19:0,81,1236	0/0:23,0:23:69.24:0,69,1099	0/0:9,0:9:24.08:0,24,378
chr10	12946773	.	GTTTTT	G	6736.94	PASS	AB=0.806;AC=41;AF=0.732;AN=56;BaseQRankSum=1.823;DP=534;FS=10.631;HRun=16;HaplotypeScore=113.3056;InbreedingCoeff=0.6320;MQ=66.86;MQ0=5;MQRankSum=-3.450;QD=16.93;ReadPosRankSum=7.499;VQSLOD=0.7295;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:51:99:0,135,3132	1/1:0,9:10:14.49:196,14,0	0/0:21,0:14:17.90:0,18,165	0/0:15,0:10:0.65:0,1,126	1/1:5,11:18:23.15:289,23,0	1/1:3,1:21:3.62:66,4,0	0/1:4,0:14:5.33:57,0,5	0/1:23,0:24:1.26:1,0,49	1/1:3,14:17:33:512,33,0	1/1:5,15:20:33.88:608,34,0	1/1:2,12:14:8.59:138,9,0	1/1:3,18:21:18.04:428,18,0	1/1:2,8:10:11.99:186,12,0	1/1:0,10:10:18.06:280,18,0	1/1:5,18:23:20.61:326,21,0	1/1:9,12:20:20.11:275,20,0	1/1:3,22:26:23.40:421,23,0	1/1:2,15:17:21:327,21,0	0/0:16,0:16:6.56:0,7,72	0/1:12,0:14:13.31:13,0,16	0/0:19,0:20:1.19:0,1,114	1/1:6,12:19:23.11:341,23,0	1/1:6,12:18:20.78:323,21,0	1/1:3,30:34:47.39:793,47,0	0/0:11,0:11:30.08:0,30,606	1/1:10,15:25:29.75:598,30,0	1/1:3,12:15:17.98:280,18,0	1/1:0,7:7:18.06:278,18,0
chr10	12946793	.	TGTTTG	T	2686.42	PASS	AB=0.969;AC=9;AF=0.161;AN=56;BaseQRankSum=-1.237;DP=590;FS=0.000;HRun=0;HaplotypeScore=143.8973;InbreedingCoeff=0.8675;MQ=62.76;MQ0=6;MQRankSum=3.976;QD=23.16;ReadPosRankSum=-6.109;VQSLOD=2.0049;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,119,3252	0/0:12,0:12:22.76:0,23,303	0/1:30,0:11:8.25:8,0,218	0/0:23,0:13:13.10:0,13,212	0/0:19,0:19:19.69:0,20,525	0/0:25,0:25:39.28:0,39,525	0/0:17,0:17:32.32:0,32,513	1/1:1,33:34:83.02:1236,83,0	0/0:16,0:16:32.86:0,33,522	0/0:20,0:20:41.93:0,42,522	0/0:16,0:16:40.37:0,40,637	0/0:22,0:22:13.39:0,13,317	0/0:15,0:15:31.82:0,32,463	0/0:14,0:14:28.88:0,29,407	0/0:20,0:20:29.10:0,29,344	0/0:21,0:20:40.70:0,41,606	0/0:29,0:29:59.66:0,60,719	0/0:17,0:17:32.46:0,32,423	1/1:2,17:18:24.05:724,24,0	1/1:1,14:15:21.05:302,21,0	1/1:15,2:16:39.11:579,39,0	0/0:23,0:23:61.85:0,62,858	0/0:12,0:12:26.58:0,27,282	0/0:35,0:35:69.93:0,70,813	0/0:11,0:11:33.11:0,33,777	0/0:23,0:23:35.93:0,36,738	0/0:18,0:18:39.83:0,40,577	0/0:15,0:15:26.20:0,26,626
chr10	12947157	.	AC	A	2310.78	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.664;DP=747;FS=0.497;HRun=1;HaplotypeScore=86.8004;InbreedingCoeff=0.9995;MQ=83.30;MQ0=2;MQRankSum=-1.686;QD=37.88;ReadPosRankSum=0.535;VQSLOD=3.9994;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,126,2010	0/0:16,0:16:48.14:0,48,714	0/0:26,0:26:71.43:0,71,1042	0/0:28,0:28:78.18:0,78,1130	0/0:28,0:28:75.26:0,75,1197	1/1:0,32:32:96.32:1342,96,0	1/1:0,27:27:78.26:1090,78,0	0/0:23,0:23:69.23:0,69,1089	0/0:17,0:17:51.15:0,51,790	0/0:20,0:20:60.20:0,60,939	0/0:16,0:16:48.16:0,48,767	0/0:39,0:39:99:0,117,1852	0/0:28,0:28:84.29:0,84,1335	0/0:24,0:24:72.25:0,72,1151	0/0:21,0:21:60.19:0,60,935	0/0:38,0:38:99:0,114,1807	0/0:33,0:33:99:0,99,1576	0/0:25,0:25:75.26:0,75,1192	0/0:24,0:24:72.25:0,72,1144	0/0:19,0:19:48.16:0,48,765	0/0:39,0:39:99:0,117,1814	0/0:24,0:24:69.19:0,69,1044	0/0:29,0:29:84.29:0,84,1338	0/0:34,0:34:99:0,99,1556	0/0:23,0:23:66.21:0,66,1032	0/0:39,0:39:99:0,114,1777	0/0:21,0:21:63.21:0,63,1007	0/0:9,0:9:27.06:0,27,385
chr10	12947261	.	ATT	A	2078.55	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-8.410;DP=644;FS=4.242;HRun=12;HaplotypeScore=106.6055;InbreedingCoeff=0.9716;MQ=65.43;MQ0=0;MQRankSum=-0.948;QD=20.38;ReadPosRankSum=-0.687;VQSLOD=2.9452;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:48:99:0,131,1803	0/0:1,0:4:9.01:0,9,86	0/0:9,0:7:17.49:0,17,192	0/0:8,0:7:15.05:0,15,220	0/0:8,0:30:63.43:0,63,595	0/0:5,0:28:54.04:0,54,521	0/0:7,0:24:42.06:0,42,398	1/1:5,29:34:86.82:841,87,0	0/0:2,0:19:30.05:0,30,286	0/0:7,0:27:66.06:0,66,625	0/0:7,0:19:38.78:0,39,329	0/0:5,0:30:53.77:0,54,534	0/0:4,0:14:18.03:0,18,172	0/0:3,0:17:24.04:0,24,227	0/0:5,0:27:33.05:0,33,315	0/0:3,1:27:17.56:0,18,399	0/0:5,0:31:66.05:0,66,616	0/0:4,0:20:38.99:0,39,355	1/1:7,13:20:39.01:391,39,0	1/1:4,16:20:42.06:427,42,0	1/1:5,23:28:57.07:580,57,0	0/0:8,0:19:34.14:0,34,294	0/0:1,0:21:38.98:0,39,363	0/0:5,0:33:63.10:0,63,601	0/0:16,0:17:41.60:0,42,538	0/0:8,0:27:65.93:0,66,602	0/0:6,0:24:39.06:0,39,371	0/0:2,0:18:36.03:0,36,335
chr10	12951131	.	TC	T	2930.82	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=11.680;DP=776;FS=4.250;HRun=5;HaplotypeScore=85.4918;InbreedingCoeff=0.9988;MQ=66.88;MQ0=0;MQRankSum=-3.680;QD=25.71;ReadPosRankSum=-0.686;VQSLOD=2.5702;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:65,0:65:99:0,187,2522	0/0:14,0:14:39.10:0,39,514	0/0:16,0:16:36.10:0,36,468	0/0:28,0:28:72.15:0,72,921	0/0:22,0:22:63.18:0,63,828	0/0:26,0:26:75.25:0,75,1025	0/0:27,0:27:78.26:0,78,1064	1/1:2,16:18:42.09:457,42,0	0/0:26,0:26:78.26:0,78,1056	0/0:26,0:26:78.25:0,78,1040	0/0:28,0:28:75.23:0,75,995	0/0:42,0:42:99:0,123,1623	0/0:26,0:26:75.11:0,75,966	0/0:27,0:27:78.25:0,78,1055	0/0:50,0:49:99:0,147,2002	0/0:26,0:26:78.25:0,78,1050	0/0:35,0:35:99:0,102,1391	0/0:23,0:23:66.22:0,66,901	1/1:0,15:15:45.08:481,45,0	1/1:5,26:30:71.40:787,71,0	1/1:4,46:50:99:1366,123,0	0/0:23,0:23:63.21:0,63,862	0/0:19,0:19:51.16:0,51,681	0/0:32,0:32:93.25:0,93,1202	0/0:22,0:22:63.20:0,63,845	0/0:24,0:23:66.22:0,66,902	0/0:26,0:26:69.23:0,69,944	0/0:9,0:9:21.06:0,21,272
chr10	12951242	.	CT	C	1101.64	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=10.252;DP=710;FS=25.694;HRun=2;HaplotypeScore=98.8598;InbreedingCoeff=0.9415;MQ=72.22;MQ0=3;MQRankSum=-9.344;QD=16.69;ReadPosRankSum=-4.611;VQSLOD=1.4391;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:59,0:59:99:0,178,2578	0/0:7,0:7:21.07:0,21,315	0/0:22,0:21:59.92:0,60,820	0/0:24,1:22:56.41:0,56,804	0/0:28,0:28:84.28:0,84,1257	0/0:20,0:17:51.17:0,51,764	0/0:29,0:29:87.28:0,87,1283	1/1:4,11:15:22.08:289,22,0	0/0:19,0:19:57.18:0,57,833	0/0:32,0:32:96.31:0,96,1404	0/0:10,0:10:30.10:0,30,449	0/0:37,0:37:99:0,111,1619	0/0:25,0:25:75.24:0,75,1104	0/0:30,0:30:87.28:0,87,1280	0/0:36,0:36:99:0,108,1598	0/0:30,0:30:90.28:0,90,1307	0/0:35,0:35:99:0,102,1507	0/0:20,0:19:57.07:0,57,761	1/1:3,7:9:18.91:242,19,0	1/1:8,9:17:4.10:308,4,0	1/1:5,19:24:10.73:409,11,0	0/0:23,0:23:69.23:0,69,1034	0/0:19,0:19:57.19:0,57,854	0/0:41,0:41:99:0,108,1615	0/0:23,0:23:69.23:0,69,1034	0/0:29,0:29:87.28:0,87,1264	0/0:29,0:29:87.29:0,87,1304	0/0:16,0:16:48.16:0,48,719
chr10	12951404	.	AAAGAAAGAAAGAAAGAAAGAAAGG	A	2542.68	PASS	AB=1.000;AC=22;AF=0.423;AN=52;BaseQRankSum=1.791;DP=613;FS=5.489;HRun=0;HaplotypeScore=333.7855;InbreedingCoeff=-0.4058;MQ=56.97;MQ0=22;MQRankSum=4.214;QD=5.78;ReadPosRankSum=-7.644;VQSLOD=0.1345;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:81.14:0,81,3284	0/1:11,0:9:27.91:28,0,391	./.	./.	1/1:3,27:30:42.87:455,43,0	0/1:21,0:18:48.46:48,0,997	0/1:17,0:12:92.62:93,0,129	0/1:12,0:6:7.01:17,0,7	0/1:20,0:20:56.09:56,0,1142	0/1:26,0:25:99:115,0,609	0/1:35,0:34:99:279,0,176	0/0:29,0:29:12.01:0,12,194	0/1:22,0:22:69.81:70,0,1391	0/0:27,0:27:21.06:0,21,589	0/1:20,0:20:99:168,0,219	0/0:23,0:23:12.50:0,12,360	0/1:17,0:17:92.88:93,0,224	0/1:36,0:36:19.51:23,0,20	0/1:23,0:19:14.74:181,0,15	0/1:21,0:20:4.64:5,0,97	0/1:6,0:6:68.70:107,0,69	0/1:27,0:27:99:194,0,1292	1/1:17,0:17:16.43:99,16,0	0/1:26,0:26:24.38:310,0,24	0/0:25,0:25:52.92:0,53,2236	0/1:34,0:34:99:263,0,1592	0/0:32,0:32:4.84:0,5,694	0/1:19,0:18:98.63:99,0,488
chr10	12951408	.	AAAGAAAGAAAGAAAGAAAGGAAGAAAGGAAGG	A	1752.60	PASS	AB=0.568;AC=7;AF=0.135;AN=52;BaseQRankSum=3.795;DP=630;FS=11.288;HRun=0;HaplotypeScore=425.0517;InbreedingCoeff=0.7340;MQ=57.25;MQ0=22;MQRankSum=-1.665;QD=27.82;ReadPosRankSum=-3.243;VQSLOD=0.2278;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:75.12:0,75,4861	0/0:11,0:9:27.05:0,27,770	./.	./.	0/0:30,0:30:46.34:0,46,550	0/0:23,0:20:48.11:0,48,1626	0/0:16,0:11:30.05:0,30,521	1/1:8,0:2:6.02:113,6,0	0/0:21,0:21:54.11:0,54,1904	0/0:28,0:27:49.93:0,50,1774	0/0:35,0:34:73.44:0,73,1165	0/0:29,0:29:6.01:0,6,164	0/0:20,0:20:51.12:0,51,2592	0/0:30,0:30:17.89:0,18,553	0/0:20,0:20:51.03:0,51,921	0/0:24,0:24:9.50:0,10,344	0/0:21,0:21:52.73:0,53,791	0/0:37,0:37:9.01:0,9,188	1/1:5,21:22:63.10:1214,63,0	0/1:5,16:20:37.38:119,0,37	1/1:8,0:8:17.71:445,18,0	0/0:28,0:28:72.17:0,72,2779	0/0:0,0:18:24.09:0,24,184	0/0:25,0:25:34.46:0,34,702	0/0:26,0:26:69.24:0,69,3803	0/0:34,0:34:99:0,102,2658	0/0:36,0:36:27.96:0,28,660	0/0:19,0:18:51.11:0,51,1681
chr10	12951412	.	AAAGAAAGAAAGAAAGG	A	5838.74	PASS	AB=0.982;AC=33;AF=0.589;AN=56;BaseQRankSum=1.744;DP=642;FS=21.076;HRun=0;HaplotypeScore=239.0428;InbreedingCoeff=0.1435;MQ=57.20;MQ0=22;MQRankSum=2.260;QD=11.34;ReadPosRankSum=-3.125;VQSLOD=1.6269;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:80.98:0,81,2030	0/1:11,0:9:9.81:127,0,10	0/0:5,0:3:8.98:0,9,80	0/0:6,0:1:2.99:0,3,23	0/1:28,0:28:1.50:183,0,1	0/1:22,0:19:99:155,0,196	1/1:15,0:10:20.91:174,21,0	1/1:10,0:4:11.89:83,12,0	0/1:21,0:21:99:193,0,335	0/1:21,7:27:33.12:651,0,33	1/1:2,32:33:71.14:548,71,0	1/1:29,0:29:2.60:10,3,0	0/1:20,0:20:99:126,0,427	0/0:32,0:32:12.04:0,12,228	1/1:20,0:20:54.07:802,54,0	0/0:25,0:25:9.03:0,9,198	1/1:22,0:22:35.80:475,36,0	1/1:3,33:36:8.96:180,9,0	1/1:26,0:22:21.07:197,21,0	0/1:20,0:19:10.15:10,0,26	0/1:9,0:9:12.14:170,0,12	0/1:27,0:27:99:277,0,498	1/1:18,0:18:16.88:100,17,0	1/1:23,0:23:20.50:409,20,0	0/0:28,0:28:72.06:0,72,1689	0/1:37,0:37:99:426,0,367	1/1:36,0:36:13.26:149,13,0	0/1:23,0:22:21.52:395,0,22
chr10	12951416	.	AAAGAAAGAAAGG	A	7146.62	PASS	AB=1.000;AC=39;AF=0.696;AN=56;BaseQRankSum=4.373;DP=643;FS=13.809;HRun=0;HaplotypeScore=199.5112;InbreedingCoeff=0.4488;MQ=57.89;MQ0=24;MQRankSum=2.688;QD=13.93;ReadPosRankSum=-0.984;VQSLOD=2.4783;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:74.76:0,75,1379	1/1:12,0:10:27:385,27,0	0/0:8,0:3:8.98:0,9,80	0/0:9,0:3:8.98:0,9,74	1/1:28,0:28:34.70:224,35,0	1/1:19,0:16:43.08:363,43,0	1/1:15,0:10:24.43:174,24,0	1/1:13,0:7:20.89:160,21,0	0/1:20,0:20:80.95:474,0,81	0/1:27,0:26:10.24:512,0,10	1/1:34,0:33:70.35:441,70,0	1/1:1,28:29:3.01:79,3,0	0/1:20,0:20:51.77:208,0,52	0/0:31,0:31:1.88:0,2,47	1/1:21,0:21:59.97:610,60,0	0/0:26,0:26:2.07:0,2,42	1/1:23,0:23:58.62:451,59,0	1/1:35,0:35:8.94:131,9,0	1/1:25,0:21:30.25:217,30,0	0/1:19,0:18:4.70:12,0,5	1/1:9,0:9:3.70:138,4,0	0/1:27,0:27:54.12:325,0,54	1/1:18,0:18:17.39:100,17,0	1/1:22,0:22:27.21:410,27,0	0/0:27,0:27:74.52:0,75,1274	1/1:37,0:37:99:828,100,0	1/1:37,0:37:23.30:326,23,0	1/1:23,0:22:29.95:576,30,0
chr10	12951420	.	AAAGAAAGG	A	7775.04	PASS	AB=1.000;AC=45;AF=0.804;AN=56;BaseQRankSum=4.539;DP=663;FS=17.321;HRun=0;HaplotypeScore=166.6753;InbreedingCoeff=0.5240;MQ=57.54;MQ0=26;MQRankSum=2.372;QD=13.52;ReadPosRankSum=1.491;VQSLOD=2.5546;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:74.58:0,75,1015	1/1:11,0:9:21.02:245,21,0	0/0:13,0:3:8.98:0,9,80	0/0:13,0:4:8.98:0,9,74	1/1:28,0:28:35.41:225,35,0	1/1:20,0:17:41.98:440,42,0	1/1:15,0:10:24.56:177,25,0	1/1:13,0:7:20.89:161,21,0	0/1:20,0:20:91.43:364,0,91	0/1:27,0:26:0.34:470,0,0	1/1:33,0:32:68.01:440,68,0	1/1:28,0:28:3.01:34,3,0	1/1:21,0:21:60.02:667,60,0	1/1:2,27:29:5.82:144,6,0	1/1:22,0:22:52.50:495,53,0	1/1:2,25:27:2.60:74,3,0	1/1:22,0:22:51.89:403,52,0	1/1:35,0:35:8.94:104,9,0	1/1:25,0:21:26.83:199,27,0	1/1:19,0:18:2.87:19,3,0	1/1:9,0:9:2.14:105,2,0	1/1:28,0:28:74.58:817,75,0	1/1:18,0:18:17.43:101,17,0	1/1:24,0:24:31.36:443,31,0	0/0:32,0:32:74.05:0,74,1126	1/1:41,0:41:99:1030,102,0	0/1:37,0:37:35.25:95,0,35	1/1:23,0:22:34.11:524,34,0
chr10	12951428	.	GAAGA	G	4340.59	PASS	AB=0.936;AC=27;AF=0.500;AN=54;BaseQRankSum=0.549;DP=689;FS=8.934;HRun=0;HaplotypeScore=151.9840;InbreedingCoeff=0.3542;MQ=58.70;MQ0=15;MQRankSum=0.684;QD=9.58;ReadPosRankSum=2.523;VQSLOD=3.6226;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:83.61:0,84,1306	1/1:9,0:8:3.33:18,3,0	0/0:16,0:4:12.04:0,12,200	0/0:16,0:7:1.99:0,2,127	0/0:28,0:28:1.87:0,2,4	1/1:24,0:21:54.17:880,54,0	1/1:17,0:12:36.03:513,36,0	0/0:14,0:13:1.83:0,2,4	0/1:22,0:22:6.83:7,0,91	0/1:26,0:26:3.48:3,0,33	0/1:32,0:32:0.19:0,0,0	1/1:28,0:28:0.47:1,0,0	0/1:22,0:22:9.09:107,0,9	1/1:28,0:28:5.94:41,6,0	0/0:26,0:26:5.37:0,5,20	1/1:27,0:27:2.81:23,3,0	0/1:25,0:25:0.12:0,0,5	1/1:36,0:36:5.99:48,6,0	0/0:22,0:21:12.42:0,12,99	./.	0/0:10,0:10:5.17:0,5,25	1/1:28,0:28:2.93:118,3,0	0/0:19,0:19:6.27:0,6,46	0/1:25,0:25:27.36:30,0,27	0/0:35,0:35:86.27:0,86,1709	1/1:6,32:38:96.69:1445,97,0	0/1:7,32:39:30.71:97,0,31	1/1:27,0:26:49.12:1008,49,0
chr10	12952252	.	T	TGC	1729.76	PASS	AB=1.000;AC=10;AF=0.185;AN=54;BaseQRankSum=5.681;DP=868;FS=3.859;HRun=0;HaplotypeScore=134.8246;InbreedingCoeff=0.7220;MQ=58.28;MQ0=3;MQRankSum=-0.434;QD=8.44;ReadPosRankSum=-4.744;VQSLOD=2.6840;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:74.98:0,75,737	0/0:14,0:14:39.01:0,39,404	./.	0/0:13,0:7:2.74:0,3,12	0/0:23,0:23:47.93:0,48,445	0/1:20,0:20:21.94:22,0,268	0/1:48,0:48:99:227,0,335	1/1:26,0:26:32.74:300,33,0	0/0:46,0:46:99:0,102,1070	0/0:38,0:38:83.82:0,84,860	0/0:11,0:11:27.91:0,28,296	0/0:60,0:60:99:0,117,1483	0/0:19,0:20:46.74:0,47,493	0/0:34,0:34:89.85:0,90,881	0/0:39,0:40:68.91:0,69,699	0/0:39,0:39:78.09:0,78,827	0/0:42,0:41:99:0,102,1037	0/0:22,0:21:37.92:0,38,514	1/1:15,2:15:25.39:230,25,0	1/1:18,8:26:36.11:389,36,0	1/1:61,7:67:82.30:729,82,0	0/0:31,0:32:71.90:0,72,741	0/0:25,0:25:45.03:0,45,461	0/0:43,0:43:84.08:0,84,893	0/0:21,0:21:32.74:0,33,351	0/0:51,0:51:73:0,73,903	0/0:17,0:17:26.99:0,27,280	0/0:21,0:21:51.01:0,51,520
chr10	12952263	.	G	GCA	1421.88	PASS	AB=0.789;AC=9;AF=0.173;AN=52;BaseQRankSum=2.380;DP=845;FS=1.729;HRun=0;HaplotypeScore=131.8711;InbreedingCoeff=0.5141;MQ=57.32;MQ0=4;MQRankSum=1.182;QD=6.61;ReadPosRankSum=-3.686;VQSLOD=2.5476;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:41:59.79:0,60,557	0/0:14,0:14:21.06:0,21,237	./.	./.	0/0:21,0:23:41.19:0,41,343	0/1:16,11:27:99:111,0,116	0/1:21,25:46:37.18:635,0,37	0/1:37,0:37:19.13:251,0,19	0/0:37,0:38:71.81:0,72,727	0/0:40,0:44:76.08:0,76,672	0/0:12,0:13:17.85:0,18,170	0/0:53,1:57:73.32:0,73,1111	0/0:24,0:24:50.90:0,51,478	0/0:30,0:36:65.13:0,65,595	0/0:30,0:31:50.11:0,50,494	0/0:31,0:33:67.17:0,67,630	0/0:35,0:37:43.71:0,44,637	0/0:16,0:20:35.76:0,36,367	1/1:20,0:19:19.36:156,19,0	1/1:22,0:22:26.63:261,27,0	1/1:62,0:61:0.86:153,1,0	0/0:27,0:29:31.89:0,32,485	0/0:22,0:25:38.05:0,38,341	0/0:35,0:41:80.38:0,80,747	0/0:21,0:21:29.70:0,30,296	0/0:41,0:40:39.67:0,40,590	0/0:16,0:16:29.80:0,30,254	0/0:23,0:23:38.93:0,39,397
chr10	12953680	.	GA	G	4196.29	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=7.228;DP=655;FS=11.855;HRun=4;HaplotypeScore=94.2288;InbreedingCoeff=0.9995;MQ=85.88;MQ0=0;MQRankSum=-1.277;QD=34.40;ReadPosRankSum=-3.353;VQSLOD=1.5777;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,132,1829	0/0:14,0:14:42.11:0,42,562	0/0:16,0:16:45.14:0,45,589	0/0:27,0:27:65.33:0,65,877	0/0:20,0:20:57.19:0,57,795	0/0:18,0:18:48.16:0,48,669	0/0:23,0:23:66.21:0,66,908	1/1:1,24:25:69.19:814,69,0	0/0:12,0:12:33.11:0,33,462	0/0:25,0:25:72.24:0,72,1008	0/0:9,0:9:27.09:0,27,378	0/0:24,0:24:72.24:0,72,1007	0/0:17,0:17:51.17:0,51,711	0/0:18,0:18:48.15:0,48,658	0/0:20,0:20:60.20:0,60,840	0/0:39,0:39:99:0,114,1564	0/0:39,0:39:99:0,114,1577	0/0:32,0:32:96.32:0,96,1341	1/1:1,34:35:99:1187,99,0	1/1:0,19:19:57.17:683,57,0	1/1:1,42:43:99:1512,126,0	0/0:18,0:18:54.18:0,54,756	0/0:12,0:12:36.08:0,36,480	0/0:31,0:31:87.29:0,87,1215	0/0:19,0:19:48.16:0,48,669	0/0:25,0:25:72.24:0,72,1005	0/0:18,0:18:54.17:0,54,741	0/0:12,0:12:36.09:0,36,468
chr10	12954568	.	T	TC	1646.85	PASS	AB=0.680;AC=34;AF=0.654;AN=52;BaseQRankSum=-2.416;DP=253;FS=7.461;HRun=9;HaplotypeScore=33.5319;InbreedingCoeff=0.3702;MQ=81.15;MQ0=0;MQRankSum=-1.285;QD=9.86;ReadPosRankSum=0.924;VQSLOD=0.7434;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:45.10:0,45,377	1/1:2,1:3:9.02:99,9,0	0/0:13,0:12:4.55:0,5,86	0/0:4,0:4:5.99:0,6,49	1/1:0,4:4:5.60:66,6,0	0/0:7,0:7:10.55:0,11,82	0/0:23,0:23:17.94:0,18,231	./.	1/1:1,5:6:9.02:100,9,0	1/1:6,0:6:3.89:35,4,0	0/1:3,1:4:2.10:49,0,2	1/1:3,10:13:15.04:166,15,0	0/1:4,10:14:20:27,0,20	1/1:5,5:10:21.06:232,21,0	1/1:10,5:15:23.52:251,24,0	0/1:4,15:19:7.87:148,0,8	0/1:2,12:15:37.06:85,0,37	1/1:6,2:8:17.96:176,18,0	0/1:6,0:6:0:0,0,0	./.	1/1:4,0:4:0.47:1,0,0	0/1:2,4:6:14.02:88,0,14	1/1:5,0:5:3.01:33,3,0	1/1:7,3:10:14.99:145,15,0	0/0:9,0:9:10.91:0,11,142	1/1:4,1:5:3.01:33,3,0	1/1:10,0:10:7.17:44,7,0	1/1:1,3:4:3.01:33,3,0
chr10	12955006	.	AGACTTCCC	A	2382.90	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=9.534;DP=647;FS=6.296;HRun=0;HaplotypeScore=158.9432;InbreedingCoeff=0.9934;MQ=82.48;MQ0=0;MQRankSum=-7.324;QD=51.80;ReadPosRankSum=-3.287;VQSLOD=2.5903;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,151,6073	0/0:8,0:8:24.08:0,24,983	0/0:18,0:18:51.16:0,51,2038	0/0:22,0:22:66.22:0,66,2480	0/0:23,0:23:66.21:0,66,2716	0/0:24,0:23:60.21:0,60,2596	0/0:28,0:28:78.74:0,79,3292	1/1:2,15:17:42.12:1038,42,0	0/0:25,0:25:75.24:0,75,3081	0/0:35,0:35:99:0,99,4222	0/0:20,0:20:57.20:0,57,2532	0/0:25,0:25:72.21:0,72,2986	0/0:29,0:29:84.29:0,84,3703	0/0:11,0:11:26.73:0,27,1106	0/0:38,0:38:99:0,111,4709	0/0:33,0:33:93.32:0,93,3986	0/0:31,0:31:90.26:0,90,3702	0/0:18,0:17:48.16:0,48,2039	1/1:0,8:8:24.06:555,24,0	1/1:0,10:10:30.06:794,30,0	1/1:6,5:11:14.67:154,15,0	0/0:15,0:15:45.07:0,45,1639	0/0:13,0:13:36.12:0,36,1321	0/0:40,0:40:99:0,111,4623	0/0:17,0:17:48.15:0,48,1950	0/0:39,0:39:99:0,108,4827	0/0:27,0:27:81.25:0,81,3385	0/0:10,0:10:30.10:0,30,1187
chr10	12955068	.	TA	T	2395.02	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=9.949;DP=630;FS=7.159;HRun=7;HaplotypeScore=73.9844;InbreedingCoeff=0.9969;MQ=73.11;MQ0=1;MQRankSum=-4.561;QD=24.19;ReadPosRankSum=-2.880;VQSLOD=2.8029;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,129,1604	0/0:7,0:7:18.06:0,18,226	0/0:15,0:15:34.66:0,35,409	0/0:20,0:17:42.08:0,42,480	0/0:23,0:23:60.19:0,60,745	0/0:15,0:14:39.12:0,39,491	0/0:26,0:26:78.16:0,78,945	1/1:3,28:31:84.18:852,84,0	0/0:23,0:23:63.15:0,63,762	0/0:23,0:23:63.20:0,63,793	0/0:18,0:18:51.16:0,51,641	0/0:22,0:22:63.20:0,63,792	0/0:26,0:26:66.21:0,66,830	0/0:25,0:25:72.14:0,72,860	0/0:35,0:35:87.27:0,87,1081	0/0:24,0:24:63.19:0,63,776	0/0:31,0:31:84.25:0,84,1042	0/0:25,0:25:69.22:0,69,867	1/1:0,23:23:69.12:694,69,0	1/1:3,11:14:24.04:245,24,0	1/1:1,30:31:75.16:765,75,0	0/0:11,0:11:30.09:0,30,365	0/0:12,0:12:36.06:0,36,424	0/0:29,0:29:78.25:0,78,981	0/0:17,0:17:45.14:0,45,566	0/0:31,0:31:81.26:0,81,1019	0/0:14,0:14:39.12:0,39,490	0/0:12,0:12:36.12:0,36,453
chr10	12955265	.	G	GAA	6045.21	PASS	AB=0.971;AC=42;AF=0.750;AN=56;BaseQRankSum=-2.838;DP=570;FS=3.605;HRun=13;HaplotypeScore=77.6123;InbreedingCoeff=0.8129;MQ=62.55;MQ0=6;MQRankSum=-0.392;QD=13.52;ReadPosRankSum=2.048;VQSLOD=4.0029;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:15.49:0,15,201	1/1:5,11:16:27.08:347,27,0	0/1:27,0:14:1.54:2,0,38	0/1:24,0:11:7.13:7,0,90	1/1:3,15:22:43.09:476,43,0	1/1:4,2:19:2.04:92,2,0	1/1:3,2:16:35.96:185,36,0	0/0:28,0:31:38.97:0,39,426	1/1:1,6:8:14.54:172,15,0	1/1:5,21:29:40.81:412,41,0	1/1:6,16:23:35.92:385,36,0	1/1:5,13:19:18.05:220,18,0	1/1:4,11:15:15.05:198,15,0	1/1:6,18:27:33.04:384,33,0	1/1:4,15:23:28.38:307,28,0	1/1:8,12:20:29.74:359,30,0	1/1:10,28:38:44.31:565,44,0	1/1:3,11:15:18.02:224,18,0	0/0:20,0:20:47.61:0,48,407	0/0:12,0:12:17.76:0,18,157	0/0:14,0:13:29.15:0,29,249	1/1:6,0:6:14.48:134,14,0	1/1:1,14:16:12.08:150,12,0	1/1:3,8:13:20.55:241,21,0	0/0:19,0:22:39.16:0,39,370	1/1:6,15:24:47.57:539,48,0	1/1:8,14:25:31.30:362,31,0	1/1:4,11:15:21.07:285,21,0
chr10	12957393	.	CTTTGT	C	698.87	PASS	AC=6;AF=0.111;AN=54;BaseQRankSum=6.817;DP=542;FS=21.475;HRun=0;HaplotypeScore=115.6004;InbreedingCoeff=0.9171;MQ=64.14;MQ0=0;MQRankSum=-6.721;QD=38.83;ReadPosRankSum=0.909;VQSLOD=1.9872;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,123,4089	0/0:13,0:13:39.13:0,39,1299	0/0:4,0:4:12.01:0,12,216	0/0:5,0:5:12.04:0,12,302	0/0:27,0:27:81.28:0,81,2611	0/0:19,0:19:54.18:0,54,1740	0/0:16,0:16:48.16:0,48,1572	./.	0/0:22,0:22:66.23:0,66,2177	0/0:27,0:27:81.28:0,81,2565	0/0:19,0:19:57.20:0,57,1891	0/0:28,0:28:84.27:0,84,2723	0/0:20,0:20:60.18:0,60,1919	0/0:27,0:27:81.28:0,81,2663	0/0:32,0:32:96.33:0,96,3129	0/0:25,0:25:75.24:0,75,2360	0/0:16,0:16:48.16:0,48,1583	0/0:24,0:24:72.25:0,72,2379	1/1:0,2:2:6.02:105,6,0	1/1:0,11:11:33.11:567,33,0	1/1:1,4:5:9.03:155,9,0	0/0:21,0:21:63.22:0,63,2043	0/0:20,0:20:60.21:0,60,1916	0/0:33,0:33:99:0,99,3240	0/0:23,0:23:69.24:0,69,2299	0/0:25,0:25:75.26:0,75,2474	0/0:22,0:22:66.23:0,66,2167	0/0:14,0:14:42.14:0,42,1399
chr10	12957399	.	AGAG	A	477.21	PASS	AC=6;AF=0.111;AN=54;BaseQRankSum=6.814;DP=532;FS=21.462;HRun=0;HaplotypeScore=90.6573;InbreedingCoeff=0.8588;MQ=62.17;MQ0=0;MQRankSum=-6.725;QD=28.07;ReadPosRankSum=1.119;VQSLOD=1.9337;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,123,3025	0/0:14,0:14:42.13:0,42,984	0/0:1,0:1:0:0,0,0	0/0:3,0:3:5.98:0,6,93	0/0:28,0:28:81.26:0,81,1886	0/0:18,0:18:48.16:0,48,1183	0/0:14,0:14:42.14:0,42,1036	./.	0/0:20,0:20:60.21:0,60,1422	0/0:25,0:25:75.25:0,75,1803	0/0:18,0:18:54.17:0,54,1280	0/0:27,0:27:81.28:0,81,1932	0/0:19,0:19:57.20:0,57,1405	0/0:29,0:29:87.30:0,87,2117	0/0:31,0:31:90.31:0,90,2190	0/0:24,0:24:72.25:0,72,1764	0/0:16,0:16:48.16:0,48,1183	0/0:28,0:28:81.28:0,81,1990	1/1:0,2:2:6.02:77,6,0	1/1:0,11:11:33.11:414,33,0	1/1:0,4:4:9.03:113,9,0	0/0:20,0:20:60.21:0,60,1478	0/0:22,0:22:66.23:0,66,1622	0/0:33,0:33:99:0,99,2437	0/0:22,0:22:66.23:0,66,1598	0/0:27,0:27:81.28:0,81,1996	0/0:21,0:21:63.22:0,63,1550	0/0:14,0:14:42.14:0,42,1008
chr10	12957418	.	C	CAG	1027.58	PASS	AC=6;AF=0.111;AN=54;BaseQRankSum=7.863;DP=525;FS=16.487;HRun=0;HaplotypeScore=77.5927;InbreedingCoeff=0.9066;MQ=63.29;MQ0=0;MQRankSum=-5.871;QD=46.71;ReadPosRankSum=0.298;VQSLOD=3.4768;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,114,1817	0/0:14,0:14:42.14:0,42,685	0/0:4,0:3:2.90:0,3,16	0/0:3,0:3:8.70:0,9,108	0/0:27,0:27:78.25:0,78,1245	0/0:20,0:20:60.19:0,60,952	0/0:16,0:16:48.16:0,48,781	./.	0/0:18,0:18:54.17:0,54,857	0/0:20,0:20:60.20:0,60,958	0/0:19,0:19:57.17:0,57,885	0/0:25,0:25:75.25:0,75,1198	0/0:20,0:20:60.19:0,60,955	0/0:29,0:29:84.27:0,84,1346	0/0:29,0:29:87.28:0,87,1393	0/0:16,0:16:48.16:0,48,783	0/0:18,0:18:51.17:0,51,823	0/0:26,0:26:75.26:0,75,1220	1/1:0,4:6:18.04:290,18,0	1/1:0,12:12:36.12:656,36,0	1/1:0,4:4:12.04:219,12,0	0/0:20,0:20:57.17:0,57,903	0/0:21,0:21:63.22:0,63,1028	0/0:34,0:34:99:0,102,1639	0/0:22,0:22:66.21:0,66,1046	0/0:28,0:28:81.26:0,81,1279	0/0:26,0:26:75.23:0,75,1196	0/0:10,0:10:30.08:0,30,462
chr10	12957497	.	C	CA	820.75	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-8.107;DP=570;FS=0.731;HRun=7;HaplotypeScore=56.6613;InbreedingCoeff=0.9978;MQ=78.34;MQ0=0;MQRankSum=-1.000;QD=26.48;ReadPosRankSum=-0.443;VQSLOD=4.0108;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:69.77:0,70,686	0/0:9,0:9:24.04:0,24,232	0/0:25,0:24:59.30:0,59,553	0/0:13,0:12:29.32:0,29,251	0/0:30,0:31:86.15:0,86,811	1/1:3,17:20:51.16:616,51,0	1/1:1,10:11:27.08:326,27,0	0/0:19,0:19:42.06:0,42,406	0/0:24,0:24:69.11:0,69,666	0/0:23,0:23:60.09:0,60,579	0/0:21,0:21:51.08:0,51,493	0/0:18,0:18:48.08:0,48,463	0/0:12,0:12:36.04:0,36,341	0/0:18,0:18:51.07:0,51,487	0/0:20,0:20:54.05:0,54,514	0/0:13,0:13:39.06:0,39,377	0/0:28,0:28:78.12:0,78,753	0/0:22,0:22:60.05:0,60,569	0/0:22,0:22:60.10:0,60,579	0/0:29,0:29:75.10:0,75,719	0/0:15,0:15:33.05:0,33,318	0/0:18,0:18:51.08:0,51,492	0/0:20,0:20:51.06:0,51,486	0/0:24,0:24:69.09:0,69,660	0/0:29,0:29:84.13:0,84,811	0/0:22,0:22:57.09:0,57,550	0/0:24,0:24:66.10:0,66,637	0/0:14,0:14:42.07:0,42,406
chr10	12957693	.	A	AG	3416.81	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-6.591;DP=474;FS=2.640;HRun=3;HaplotypeScore=49.0090;InbreedingCoeff=0.9734;MQ=84.47;MQ0=0;MQRankSum=-1.215;QD=38.39;ReadPosRankSum=-4.227;VQSLOD=2.0838;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:69.21:0,69,828	0/0:7,0:7:18.06:0,18,216	0/0:21,0:20:53.17:0,53,618	0/0:26,0:26:64.71:0,65,736	0/0:16,0:16:45.14:0,45,540	0/0:18,0:18:54.17:0,54,648	0/0:20,0:20:57.17:0,57,684	1/1:1,26:27:78.25:1075,78,0	0/0:25,0:25:75.23:0,75,899	0/0:13,0:13:33.10:0,33,396	0/0:11,0:11:33.10:0,33,396	0/0:18,0:18:45.12:0,45,521	0/0:10,0:10:24.07:0,24,288	0/0:19,0:19:48.15:0,48,575	0/0:19,0:19:54.16:0,54,648	0/0:13,0:13:39.10:0,39,446	0/0:18,0:18:51.16:0,51,612	0/0:17,0:16:48.15:0,48,574	1/1:1,31:32:90.26:1208,90,0	1/1:0,3:3:9.03:126,9,0	1/1:1,26:27:72.24:1008,72,0	0/0:7,0:7:21.05:0,21,240	0/0:11,0:11:33.10:0,33,396	0/0:27,0:27:78.24:0,78,936	0/0:9,0:9:24.07:0,24,288	0/0:8,0:8:21.06:0,21,252	0/0:21,0:21:63.19:0,63,756	0/0:5,0:5:15.05:0,15,180
chr10	12959339	.	GC	G	21548.34	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=10.785;DP=786;FS=0.000;HRun=4;HaplotypeScore=77.5769;InbreedingCoeff=0.9993;MQ=85.58;MQ0=0;MQRankSum=-6.357;QD=32.65;ReadPosRankSum=2.802;VQSLOD=5.3991;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:58:99:0,166,2275	1/1:0,8:8:24.07:288,24,0	0/0:27,0:27:66.21:0,66,898	0/0:21,0:21:57.19:0,57,797	1/1:0,26:26:72.22:864,72,0	1/1:1,26:27:72.22:864,72,0	1/1:1,31:32:90.28:1080,90,0	1/1:1,22:23:66.18:769,66,0	1/1:1,24:25:72.22:864,72,0	1/1:0,35:35:99:1246,105,0	1/1:0,18:18:48.15:576,48,0	1/1:2,37:39:99:1188,99,0	1/1:1,26:27:75.23:900,75,0	1/1:1,27:28:81.25:972,81,0	1/1:0,24:24:63.19:756,63,0	1/1:1,32:33:93.29:1116,93,0	1/1:3,24:27:66.20:792,66,0	1/1:3,32:35:93.29:1115,93,0	1/1:5,17:22:51.13:598,51,0	1/1:1,21:22:57.17:684,57,0	1/1:3,41:44:99:1476,123,0	1/1:0,21:21:63.19:756,63,0	1/1:1,18:19:42.13:504,42,0	1/1:2,39:41:99:1332,111,0	0/0:20,0:20:60.20:0,60,840	1/1:2,37:39:99:1332,111,0	1/1:1,33:34:90.28:1080,90,0	1/1:0,11:11:33.10:396,33,0
chr10	12960132	.	G	GGTGTGTGTGTGT	14443.96	PASS	AB=0.936;AC=48;AF=0.857;AN=56;BaseQRankSum=-0.434;DP=637;FS=15.633;HRun=0;HaplotypeScore=239.7717;InbreedingCoeff=0.4735;MQ=47.39;MQ0=16;MQRankSum=-7.201;QD=25.03;ReadPosRankSum=-3.097;VQSLOD=2.2387;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:37,0:43:42.57:43,0,1659	1/1:8,0:8:3.01:74,3,0	0/0:19,0:8:8.77:0,9,152	0/0:22,0:7:5.60:0,6,88	1/1:17,2:22:8.90:469,9,0	1/1:30,0:25:4.67:214,5,0	1/1:27,0:26:8.97:85,9,0	1/1:32,0:30:21.01:354,21,0	1/1:19,1:20:11.97:546,12,0	1/1:29,0:27:47.51:1847,48,0	1/1:12,1:15:6.02:350,6,0	1/1:19,6:25:19:1049,19,0	1/1:12,3:15:11.84:622,12,0	1/1:17,0:20:6.02:215,6,0	1/1:32,1:42:5.20:443,5,0	1/1:22,2:24:15.52:854,16,0	1/1:18,2:20:15.19:653,15,0	1/1:15,3:21:21.07:1070,21,0	1/1:18,0:19:24.08:570,24,0	1/1:11,0:20:11.96:266,12,0	1/1:14,0:21:0.47:1,0,0	0/1:15,1:17:2.89:668,0,3	1/1:6,0:8:3.01:116,3,0	1/1:21,0:23:23.17:995,23,0	0/0:16,0:19:35.72:0,36,1061	1/1:17,0:25:36.11:1173,36,0	1/1:24,1:26:22.80:990,23,0	1/1:12,2:16:15.05:775,15,0
chr10	12960776	.	C	CT	4747.60	PASS	AB=0.654;AC=29;AF=0.518;AN=56;BaseQRankSum=6.178;DP=643;FS=3.908;HRun=13;HaplotypeScore=96.4512;InbreedingCoeff=0.3633;MQ=71.83;MQ0=0;MQRankSum=-1.306;QD=11.58;ReadPosRankSum=0.756;VQSLOD=4.6627;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:43:91.45:0,91,625	1/1:2,7:9:15.02:139,15,0	0/0:22,0:18:19.04:0,19,115	0/0:15,0:13:9.71:0,10,52	0/1:13,13:26:22.71:240,0,23	0/0:21,1:22:22.73:0,23,301	0/0:26,0:28:60.45:0,60,402	0/0:32,1:34:18.57:0,19,265	1/1:8,18:26:24.46:369,24,0	0/1:8,11:19:8.13:218,0,8	1/1:8,12:20:20.98:187,21,0	0/1:5,16:21:19.79:264,0,20	0/1:6,13:19:6.81:140,0,7	1/1:6,19:26:30.31:408,30,0	1/1:5,20:25:39.04:362,39,0	1/1:8,24:32:24.85:504,25,0	0/1:8,13:21:20.14:118,0,20	0/1:10,10:23:5.42:203,0,5	0/0:14,0:15:6.98:0,7,184	0/0:20,1:21:12.83:0,13,225	0/0:29,0:32:53.47:0,53,342	0/1:6,5:11:23.15:93,0,23	1/1:6,14:20:15.56:286,16,0	0/1:5,23:28:16.69:289,0,17	0/1:21,2:27:22.78:23,0,245	1/1:8,19:27:18.85:444,19,0	1/1:5,17:23:36.35:320,36,0	1/1:1,6:7:15.02:139,15,0
chr10	12963072	.	C	CTGGTGGTGGTGG	22582.30	PASS	AB=1.000;AC=47;AF=0.839;AN=56;BaseQRankSum=7.163;DP=634;FS=7.094;HRun=0;HaplotypeScore=237.5152;InbreedingCoeff=0.7367;MQ=52.17;MQ0=4;MQRankSum=-8.263;QD=42.37;ReadPosRankSum=-2.084;VQSLOD=3.2608;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:51.12:0,51,1541	1/1:13,0:13:24.04:1005,24,0	0/0:36,0:22:18.02:0,18,371	0/0:24,0:13:24.55:0,25,599	1/1:26,0:26:21.07:1074,21,0	1/1:24,0:24:19.19:232,19,0	0/1:30,0:30:78.98:128,0,79	1/1:22,0:22:19.19:259,19,0	1/1:24,0:24:36.12:1874,36,0	1/1:30,0:30:45.08:1613,45,0	1/1:20,0:20:6.02:191,6,0	1/1:19,5:24:29.97:1423,30,0	1/1:19,0:19:33.11:1599,33,0	1/1:24,0:24:45.15:2241,45,0	1/1:26,0:26:24.08:1156,24,0	1/1:28,0:28:45.94:1842,46,0	1/1:20,0:20:17.79:953,18,0	1/1:28,0:28:30.10:1337,30,0	1/1:29,0:29:10.18:651,10,0	1/1:22,0:22:35.99:847,36,0	1/1:22,0:22:3.01:82,3,0	1/1:17,0:17:6.91:193,7,0	1/1:14,0:14:9.03:466,9,0	1/1:28,0:28:29.27:1086,29,0	0/0:18,0:18:45.13:0,45,1409	1/1:22,0:22:30.10:1316,30,0	1/1:16,0:16:21.54:891,22,0	1/1:5,0:5:6.02:125,6,0
chr10	12963080	.	G	GGTA	5299.16	PASS	AB=0.986;AC=26;AF=0.464;AN=56;BaseQRankSum=13.245;DP=648;FS=21.796;HRun=0;HaplotypeScore=202.3567;InbreedingCoeff=-0.4228;MQ=51.49;MQ0=5;MQRankSum=-10.461;QD=9.96;ReadPosRankSum=5.914;VQSLOD=2.9839;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:75.10:0,75,1039	0/1:13,0:13:13.12:212,0,13	0/0:37,0:20:21.09:0,21,326	0/0:28,0:15:35.53:0,36,449	0/1:23,0:24:44.88:247,0,45	0/1:20,3:27:99:381,0,139	1/1:30,0:30:6.59:331,7,0	0/1:19,0:19:69.57:70,0,89	0/1:23,0:23:92.87:293,0,93	0/1:29,0:29:99:308,0,240	0/1:22,0:22:59.58:60,0,152	0/1:26,0:26:72.94:287,0,73	0/1:22,0:23:9.87:322,0,10	0/1:25,0:25:11.10:335,0,11	0/1:25,0:25:29.06:203,0,29	1/1:26,0:26:16.18:420,16,0	0/1:22,0:22:44.29:221,0,44	0/1:26,0:26:3.04:260,0,3	0/1:32,0:32:99:265,0,167	0/1:24,0:24:44.36:379,0,44	1/1:20,0:20:9.02:101,9,0	0/1:17,0:17:16.30:16,0,111	0/1:14,0:14:33:117,0,33	0/1:27,0:27:99:111,0,99	0/0:20,0:20:51.15:0,51,811	0/1:22,0:22:99:231,0,150	0/1:16,0:16:9.09:131,0,9	0/0:5,0:5:5.46:0,5,46
chr10	12963083	.	G	GGTGGTGGTGGTA	25142.71	PASS	AB=0.766;AC=36;AF=0.643;AN=56;BaseQRankSum=3.308;DP=648;FS=2.505;HRun=0;HaplotypeScore=247.6673;InbreedingCoeff=0.0197;MQ=50.10;MQ0=6;MQRankSum=-10.903;QD=46.56;ReadPosRankSum=7.840;VQSLOD=3.9673;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:66.11:0,66,1824	1/1:8,5:15:12.83:1046,13,0	0/0:35,0:16:23.17:0,23,529	0/0:27,0:14:29.05:0,29,748	1/1:12,11:25:13.73:1194,14,0	0/1:19,0:26:83.81:122,0,84	0/1:7,0:30:63.85:64,0,132	0/1:18,0:18:99:153,0,129	1/1:13,10:24:6.89:1820,7,0	1/1:15,15:31:1.67:1859,2,0	0/1:14,8:23:13.79:201,0,14	1/1:22,3:25:17.47:1554,17,0	0/1:15,7:22:11.22:1734,0,11	1/1:16,10:26:24.51:2412,25,0	1/1:10,13:25:1.41:1232,1,0	1/1:12,14:26:35.75:2021,36,0	0/1:22,0:22:29.15:1432,0,29	0/1:18,9:27:7.22:2042,0,7	0/1:11,0:30:99:806,0,127	0/1:21,0:24:1.78:699,0,2	0/1:5,0:19:4.55:133,0,5	1/1:9,8:17:6.42:192,6,0	0/1:13,1:14:33.72:464,0,34	1/1:17,10:28:3.98:1135,4,0	0/0:19,0:19:48.15:0,48,1534	1/1:13,7:20:45.06:1667,45,0	0/1:6,10:18:14.43:992,0,14	1/1:5,0:5:6.02:169,6,0
chr10	12963086	.	G	GGTA	3452.84	PASS	AB=0.971;AC=22;AF=0.393;AN=56;BaseQRankSum=11.807;DP=631;FS=1.797;HRun=0;HaplotypeScore=211.3487;InbreedingCoeff=-0.6605;MQ=48.54;MQ0=6;MQRankSum=-8.744;QD=7.00;ReadPosRankSum=8.877;VQSLOD=2.2117;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:66.12:0,66,967	0/1:13,0:14:53.06:105,0,53	0/0:34,0:15:32.59:0,33,352	0/0:28,0:15:35.61:0,36,460	0/1:26,0:26:64.71:149,0,65	0/1:26,0:26:91.89:131,0,92	0/1:28,0:28:99:135,0,117	0/1:18,0:18:99:195,0,194	0/1:22,0:22:99:141,0,126	0/1:25,0:25:99:159,0,219	0/0:22,0:22:6.91:0,7,205	0/1:24,0:24:99:140,0,164	0/1:23,0:23:99:173,0,133	0/1:26,0:26:99:191,0,114	0/1:26,0:26:94.89:101,0,95	0/1:26,0:26:67.40:198,0,67	0/1:21,0:21:86.67:87,0,179	0/1:24,0:24:99:144,0,212	0/1:25,5:30:42.44:657,0,42	0/1:11,15:26:50.58:546,0,51	0/1:16,1:17:35.96:41,0,36	0/1:15,0:15:14.04:14,0,63	0/1:13,0:13:31.67:32,0,101	0/1:27,0:27:23.31:23,0,106	0/0:21,0:21:48.15:0,48,782	0/1:18,0:18:62.79:63,0,180	0/1:18,0:18:28.26:28,0,117	0/0:6,0:6:7.51:0,8,67
chr10	12963089	.	G	GGTGGTA	9881.75	PASS	AB=0.988;AC=25;AF=0.446;AN=56;BaseQRankSum=10.066;DP=609;FS=1.834;HRun=0;HaplotypeScore=211.1453;InbreedingCoeff=-0.6635;MQ=47.99;MQ0=6;MQRankSum=-10.646;QD=19.53;ReadPosRankSum=7.104;VQSLOD=4.1666;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:69.02:0,69,1273	0/1:15,0:15:36.89:423,0,37	0/0:31,0:13:30:0,30,445	0/0:27,0:15:29.76:0,30,540	0/1:23,0:23:43.87:568,0,44	0/1:24,0:24:86.63:490,0,87	0/1:26,0:26:99:346,0,162	0/1:21,0:21:1.10:1,0,326	0/1:23,0:23:88.91:568,0,89	0/1:24,0:24:99:805,0,130	0/1:20,0:20:71.29:92,0,71	0/1:25,0:25:99:606,0,109	0/1:22,0:23:99:683,0,121	0/1:27,0:27:99:802,0,100	0/1:25,0:25:80.62:404,0,81	0/1:25,0:25:60.23:825,0,60	0/1:21,0:21:99:434,0,122	0/1:25,0:25:99:543,0,209	0/1:29,0:29:99:413,0,228	0/1:25,0:25:79.74:542,0,80	0/1:15,0:15:36.96:50,0,37	1/1:13,0:13:3.01:86,3,0	0/1:9,4:13:71.91:154,0,72	0/1:24,0:24:82.85:293,0,83	0/0:20,0:20:51.15:0,51,1048	0/1:18,0:18:79.96:364,0,80	0/1:16,0:16:94.86:255,0,95	0/1:6,0:6:15.91:135,0,16
chr10	12963092	.	G	GGTA	4456.93	PASS	AB=0.912;AC=23;AF=0.411;AN=56;BaseQRankSum=12.649;DP=580;FS=0.000;HRun=0;HaplotypeScore=200.3585;InbreedingCoeff=-0.6790;MQ=47.39;MQ0=6;MQRankSum=-10.425;QD=9.65;ReadPosRankSum=6.792;VQSLOD=4.0112;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:69.09:0,69,984	0/1:11,3:14:57.64:195,0,58	0/0:28,0:11:32.94:0,33,360	0/0:26,0:15:29.96:0,30,403	0/1:17,5:22:42.87:298,0,43	0/1:23,0:23:81.85:150,0,82	0/1:27,0:27:99:131,0,147	0/0:19,0:19:35.96:0,36,364	0/1:20,3:23:88.83:297,0,89	0/1:20,3:23:99:363,0,157	0/1:17,0:17:47.47:47,0,104	0/1:19,5:24:99:335,0,107	0/1:17,5:22:99:355,0,119	0/1:17,9:26:94.84:435,0,95	0/1:22,4:26:99:208,0,103	0/1:18,6:24:56.10:459,0,56	0/1:20,2:22:99:203,0,199	0/1:17,4:21:99:186,0,245	0/1:25,0:25:66.49:66,0,178	0/1:24,0:24:76.54:146,0,77	0/1:15,0:15:9.59:10,0,36	0/1:10,0:10:14.24:41,0,14	0/1:11,1:12:76.72:77,0,80	0/1:23,1:24:52.28:52,0,107	0/0:20,0:20:51.14:0,51,803	0/1:16,1:17:99:186,0,102	0/1:14,1:15:93.86:134,0,94	0/1:6,0:6:9.63:85,0,10
chr10	12963096	.	G	GTGGTGGTGGTGA	20667.57	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=7.815;DP=552;FS=1.070;HRun=0;HaplotypeScore=215.4497;InbreedingCoeff=0.8722;MQ=48.68;MQ0=6;MQRankSum=-5.762;QD=45.72;ReadPosRankSum=1.998;VQSLOD=4.6804;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:68.98:0,69,1774	1/1:8,2:13:26.93:821,27,0	0/0:28,0:12:29.21:0,29,437	0/0:25,0:14:25.13:0,25,637	1/1:15,5:20:30:1209,30,0	1/1:17,0:25:47.44:533,47,0	1/1:21,0:27:16.02:411,16,0	1/1:20,0:20:24.83:383,25,0	1/1:19,3:22:38.84:1274,39,0	1/1:20,3:23:63.02:1642,63,0	1/1:15,0:15:23.86:322,24,0	1/1:13,4:18:44.49:1325,44,0	1/1:17,5:23:56.68:1576,57,0	1/1:17,9:26:53.82:1709,54,0	1/1:18,4:22:32.85:952,33,0	1/1:16,6:22:53.88:1788,54,0	1/1:20,2:22:50.29:926,50,0	1/1:15,3:19:56.74:1166,57,0	1/1:18,0:23:0.04:815,0,0	1/1:14,0:22:48:1066,48,0	1/1:16,0:17:14.93:189,15,0	1/1:7,0:7:5.93:181,6,0	1/1:10,1:11:23.90:468,24,0	1/1:22,1:24:29.67:479,30,0	0/0:20,0:20:54.13:0,54,1600	1/1:12,1:13:35.72:784,36,0	1/1:13,1:14:29.67:523,30,0	1/1:4,0:4:6.49:125,6,0
chr10	12964005	.	AAAG	A	2390.04	PASS	AB=0.989;AC=31;AF=0.554;AN=56;BaseQRankSum=-0.886;DP=530;FS=15.591;HRun=0;HaplotypeScore=94.6201;InbreedingCoeff=-0.3655;MQ=61.48;MQ0=5;MQRankSum=3.185;QD=5.31;ReadPosRankSum=2.507;VQSLOD=1.1164;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:93.41:0,93,1172	1/1:5,0:5:3.49:28,3,0	0/1:19,0:10:0.94:1,0,157	0/0:19,0:11:21.98:0,22,209	0/1:28,0:28:70.97:111,0,71	0/1:23,0:23:0.96:1,0,234	0/1:16,0:16:18.97:19,0,127	1/1:7,23:30:36.05:455,36,0	0/1:15,0:15:45.22:122,0,45	0/1:21,0:21:77.62:113,0,78	0/1:9,0:9:26.43:26,0,30	0/1:21,0:21:18.35:18,0,169	0/1:15,0:15:18.14:18,0,82	0/1:10,0:10:28.54:63,0,29	0/1:30,0:29:83.47:83,0,108	0/1:17,0:17:35.64:36,0,90	0/1:18,1:19:22.88:110,0,23	0/1:24,1:24:55.66:108,0,56	1/1:13,1:14:21.37:232,21,0	1/1:4,10:14:1.77:101,2,0	1/1:13,5:17:31.97:348,32,0	0/1:7,0:6:23.16:23,0,61	0/1:14,1:15:39.02:39,0,76	0/1:28,0:27:50.16:187,0,50	0/0:19,0:18:39.11:0,39,664	0/1:24,0:24:47.29:202,0,47	0/1:18,1:19:56.49:103,0,56	1/1:8,0:8:0.89:2,1,0
chr10	12964006	.	AAG	A	4729.71	PASS	AB=0.958;AC=45;AF=0.804;AN=56;BaseQRankSum=-1.097;DP=532;FS=13.109;HRun=0;HaplotypeScore=81.0800;InbreedingCoeff=0.6658;MQ=64.24;MQ0=5;MQRankSum=-0.157;QD=10.90;ReadPosRankSum=-2.782;VQSLOD=3.0424;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:68.98:0,69,782	1/1:5,0:5:11.70:74,12,0	0/0:21,0:12:26.44:0,26,201	0/0:20,0:12:22.65:0,23,186	1/1:27,0:27:18.73:211,19,0	0/1:24,0:24:6.16:94,0,6	1/1:17,0:17:10.55:110,11,0	1/1:28,1:29:53.77:432,54,0	1/1:15,0:15:18.33:182,18,0	1/1:22,0:22:21.51:264,22,0	1/1:8,0:8:12.30:77,12,0	0/1:21,0:21:1.22:106,0,1	1/1:14,1:15:20.46:157,20,0	1/1:12,0:12:23.01:193,23,0	1/1:29,1:29:37.32:312,37,0	1/1:16,1:17:14.05:122,14,0	1/1:17,2:19:30.53:246,31,0	1/1:26,0:25:38.05:293,38,0	1/1:14,0:14:26.01:215,26,0	1/1:12,0:12:17.78:120,18,0	1/1:17,0:16:35.89:285,36,0	0/1:6,1:6:10.29:64,0,10	1/1:17,1:18:21.45:219,21,0	1/1:26,2:27:39.52:366,40,0	0/0:19,0:18:42.04:0,42,529	1/1:23,1:25:49.06:379,49,0	1/1:18,0:18:26.60:193,27,0	1/1:8,0:8:2.90:16,3,0
chr10	12964007	.	AG	A	7173.84	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-0.555;DP=500;FS=15.440;HRun=1;HaplotypeScore=61.1733;InbreedingCoeff=0.9240;MQ=65.27;MQ0=5;MQRankSum=-1.766;QD=17.50;ReadPosRankSum=-2.119;VQSLOD=3.3656;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:50.46:0,50,587	1/1:1,4:5:12.91:147,13,0	0/0:21,0:12:28.68:0,29,193	0/0:20,0:12:12.38:0,12,179	1/1:7,19:26:16.60:287,17,0	1/1:21,1:22:48.50:287,48,0	1/1:15,2:17:45.70:333,46,0	1/1:29,0:29:44.93:386,45,0	1/1:13,3:16:24.34:296,24,0	1/1:15,4:20:44.82:369,45,0	1/1:0,8:8:20.31:144,20,0	1/1:15,3:18:43.31:333,43,0	1/1:11,2:13:26.90:223,27,0	1/1:11,0:11:31.16:249,31,0	1/1:17,9:25:52.24:524,52,0	1/1:13,3:17:34.55:265,35,0	1/1:16,3:19:42.25:341,42,0	1/1:19,6:24:60.03:525,60,0	1/1:11,0:13:29.37:228,29,0	1/1:10,0:10:17.82:121,18,0	1/1:17,0:16:36.99:259,37,0	1/1:7,1:7:12.73:114,13,0	1/1:12,3:15:35.41:288,35,0	1/1:22,5:26:64.22:513,64,0	0/0:16,0:15:41.20:0,41,393	1/1:18,3:22:54.86:499,55,0	1/1:11,7:18:46.35:401,46,0	1/1:0,8:8:3.01:40,3,0
chr10	12964492	.	AGAAG	A	7395.89	PASS	AB=0.652;AC=41;AF=0.759;AN=54;BaseQRankSum=-1.180;DP=522;FS=16.152;HRun=0;HaplotypeScore=98.2761;InbreedingCoeff=0.6808;MQ=63.84;MQ0=10;MQRankSum=-0.452;QD=20.89;ReadPosRankSum=2.379;VQSLOD=3.1382;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:27:48.16:0,48,744	1/1:10,0:10:5.10:80,5,0	0/0:26,0:12:36.08:0,36,604	0/0:32,0:19:43.48:0,43,835	0/0:13,0:12:0.89:0,1,2	1/1:10,0:10:13.63:209,14,0	1/1:20,0:20:1.86:8,2,0	1/1:20,0:20:54.18:825,54,0	1/1:22,0:20:43.80:688,44,0	1/1:20,0:20:27.56:591,28,0	1/1:4,0:4:6.02:92,6,0	1/1:27,0:27:49.84:782,50,0	0/1:7,8:13:0.04:0,0,1	0/0:4,15:19:0.94:0,1,1	1/1:20,0:20:10.21:340,10,0	1/1:26,0:26:40.19:555,40,0	1/1:19,0:19:29.85:506,30,0	1/1:18,0:18:27.53:353,28,0	1/1:20,0:20:60.19:868,60,0	1/1:12,0:12:2.05:37,2,0	./.	1/1:12,0:11:17.10:252,17,0	1/1:11,0:11:3.43:87,3,0	1/1:22,0:21:5.27:256,5,0	0/0:19,0:19:48.16:0,48,789	1/1:26,0:25:14.43:676,14,0	1/1:15,0:14:2.22:7,2,0	1/1:5,0:5:12.04:183,12,0
chr10	12964494	.	AAG	A	8001.66	PASS	AB=1.000;AC=41;AF=0.759;AN=54;BaseQRankSum=1.033;DP=464;FS=8.030;HRun=0;HaplotypeScore=68.6033;InbreedingCoeff=0.7240;MQ=71.89;MQ0=5;MQRankSum=-1.835;QD=26.41;ReadPosRankSum=3.056;VQSLOD=5.4586;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:51.17:0,51,783	1/1:1,8:9:4.81:80,5,0	0/0:31,0:16:45.11:0,45,742	0/0:33,0:20:46.49:0,46,873	0/0:3,8:10:0.89:0,1,2	1/1:9,1:10:19.82:282,20,0	1/1:1,18:19:3:29,3,0	1/1:2,19:21:58.12:853,58,0	1/1:17,3:19:48.12:684,48,0	1/1:12,4:16:44.16:614,44,0	1/1:3,0:3:6.02:92,6,0	1/1:22,0:22:57.18:832,57,0	0/1:9,0:9:0.23:0,0,0	0/0:16,0:16:0.47:0,0,1	1/1:14,2:17:28.82:391,29,0	1/1:19,1:20:41.67:627,42,0	1/1:16,0:16:35.29:523,35,0	1/1:10,1:12:32.92:410,33,0	1/1:0,20:20:60.20:870,60,0	1/1:2,10:12:2.02:37,2,0	./.	1/1:11,0:11:17.36:252,17,0	1/1:5,4:9:8.10:114,8,0	1/1:17,0:17:19.37:290,19,0	0/0:19,0:19:48.16:0,48,789	1/1:21,2:23:57.03:788,57,0	1/1:2,9:11:3.48:50,3,0	1/1:5,0:5:12.04:183,12,0
chr10	12964989	.	C	CAT	526.19	PASS	AB=0.876;AC=8;AF=0.154;AN=52;BaseQRankSum=-0.775;DP=589;FS=14.180;HRun=0;HaplotypeScore=184.8782;InbreedingCoeff=-0.2462;MQ=38.40;MQ0=40;MQRankSum=-4.237;QD=2.32;ReadPosRankSum=-2.326;VQSLOD=1.5239;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:30:32.25:0,32,327	0/0:8,0:8:8.89:0,9,74	./.	./.	0/0:23,1:22:9.34:0,9,59	0/1:17,0:16:31.85:32,0,40	0/1:35,4:36:14.64:15,0,41	0/1:40,2:36:99:243,0,317	0/0:7,1:7:2.99:0,3,24	0/0:27,0:23:34.09:0,34,316	0/0:13,2:13:5.99:0,6,48	0/0:23,2:24:5.37:0,5,187	0/0:19,1:19:23.50:0,23,156	0/0:22,0:19:7.27:0,7,88	0/1:26,0:24:12.51:13,0,379	0/0:22,0:20:14.61:0,15,106	0/0:31,1:27:1.09:0,1,273	0/0:22,0:19:13.59:0,14,149	0/1:16,3:16:99:174,0,148	0/1:12,9:19:85.75:86,0,97	0/1:13,15:27:34.99:47,0,35	0/0:17,0:17:3.77:0,4,63	0/0:12,0:12:5.84:0,6,61	0/0:29,1:26:10.94:0,11,71	0/0:12,0:11:12.03:0,12,146	0/1:30,2:30:46.32:46,0,452	0/0:16,0:15:24.14:0,24,145	0/0:6,0:6:10.22:0,10,62
chr10	12964995	.	TACAC	T	902.67	PASS	AB=0.936;AC=20;AF=0.400;AN=50;BaseQRankSum=-3.772;DP=612;FS=0.000;HRun=0;HaplotypeScore=193.6893;InbreedingCoeff=-0.0046;MQ=38.70;MQ0=41;MQRankSum=2.072;QD=2.58;ReadPosRankSum=-2.891;VQSLOD=2.1946;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:34:14.13:0,14,386	1/1:9,1:10:6.02:77,6,0	./.	./.	0/1:22,1:21:5.65:15,0,6	0/0:18,0:17:7.56:0,8,69	0/0:38,0:35:3.01:0,3,43	0/0:49,0:42:43.47:0,43,439	./.	0/1:27,2:25:99:113,0,118	0/0:13,1:13:0:0,0,0	1/1:22,4:25:1.72:85,2,0	0/1:19,0:18:7.64:51,0,8	1/1:20,3:20:2.88:15,3,0	0/1:26,3:27:98.29:180,0,98	1/1:17,6:21:5.89:62,6,0	0/1:29,2:26:46.29:59,0,46	0/1:21,1:19:51.19:98,0,51	0/0:21,0:18:22.30:0,22,296	0/0:20,0:18:11.90:0,12,186	0/0:32,0:30:12.04:0,12,174	0/1:17,1:18:6.75:7,0,29	1/1:12,1:14:2.52:14,3,0	0/1:26,3:26:14.65:80,0,15	0/0:10,0:10:11.93:0,12,229	0/1:34,1:31:81.77:82,0,133	0/1:15,3:17:43.22:115,0,43	0/0:5,2:7:5.90:0,6,43
chr10	12964997	.	C	CAT	834.54	PASS	AB=1.000;AC=10;AF=0.185;AN=54;BaseQRankSum=-3.076;DP=617;FS=5.037;HRun=0;HaplotypeScore=181.2157;InbreedingCoeff=0.1615;MQ=38.45;MQ0=42;MQRankSum=-1.835;QD=3.54;ReadPosRankSum=0.563;VQSLOD=2.6415;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:35:20:0,20,380	0/0:10,0:10:8.63:0,9,48	0/0:5,0:1:0.89:0,1,2	./.	0/0:24,0:22:3.58:0,4,52	1/1:17,3:19:11.51:123,12,0	1/1:35,1:33:12.32:103,12,0	0/1:50,0:42:99:334,0,162	0/0:9,0:8:2.99:0,3,24	0/0:29,0:25:27.69:0,28,265	0/0:15,0:13:5.99:0,6,48	0/0:25,0:24:16.65:0,17,198	0/0:19,0:18:24.64:0,25,169	0/0:23,0:20:7.27:0,7,88	0/1:28,0:26:51.40:164,0,51	0/0:23,0:21:12.27:0,12,83	0/0:31,0:26:27.51:0,28,248	0/0:23,0:20:22.62:0,23,174	0/1:21,0:18:99:136,0,139	0/1:20,0:18:55.94:56,0,83	0/1:32,0:30:42.93:43,0,55	0/0:17,0:18:12.17:0,12,101	0/0:14,0:14:8.76:0,9,64	0/1:29,0:25:21.62:22,0,26	0/0:11,0:10:12.04:0,12,169	0/0:35,0:31:47.56:0,48,495	0/0:17,0:16:27.71:0,28,174	0/0:7,0:7:12.22:0,12,79
chr10	12965001	.	C	CAT	704.01	PASS	AB=0.997;AC=16;AF=0.296;AN=54;BaseQRankSum=3.516;DP=635;FS=32.912;HRun=0;HaplotypeScore=180.4075;InbreedingCoeff=-0.1244;MQ=39.10;MQ0=41;MQRankSum=-2.423;QD=1.93;ReadPosRankSum=1.747;VQSLOD=1.4627;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:20.52:0,21,405	0/0:5,6:11:0.25:0,0,3	0/0:4,0:1:2.88:0,3,15	./.	0/1:26,0:24:33.53:34,0,97	1/1:20,0:19:4.18:106,4,0	1/1:37,0:34:18.21:100,18,0	0/0:49,0:41:70.75:0,71,620	0/0:11,0:10:5.99:0,6,48	0/1:29,0:25:99:123,0,133	0/0:13,1:12:4.04:0,4,12	0/1:27,1:27:53.35:53,0,61	0/1:21,0:19:1.03:1,0,86	0/0:25,0:22:2.21:0,2,84	0/1:28,0:26:7.25:7,0,77	0/1:23,0:21:15:40,0,15	0/1:31,0:26:73.11:127,0,73	0/1:24,0:21:33.58:34,0,139	0/0:21,0:20:44.81:0,45,348	0/0:20,0:18:22.87:0,23,187	0/0:34,0:32:15.93:0,16,157	0/0:15,0:15:6.04:0,6,34	0/1:15,0:15:1.64:2,0,36	0/1:30,0:26:19.57:101,0,20	0/0:12,0:11:12.04:0,12,169	0/1:34,0:30:77.47:77,0,246	0/1:18,0:17:39.55:47,0,40	0/0:7,0:7:10.42:0,10,50
chr10	12965192	.	GTCCT	G	20537.24	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=2.801;DP=528;FS=13.932;HRun=0;HaplotypeScore=105.1312;InbreedingCoeff=0.9784;MQ=75.66;MQ0=0;MQRankSum=-8.988;QD=45.64;ReadPosRankSum=4.916;VQSLOD=4.5828;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:93.32:0,93,2563	1/1:0,8:8:21.07:419,21,0	0/0:19,0:18:54.19:0,54,1396	0/0:19,0:19:51.59:0,52,1317	1/1:0,12:12:15.05:300,15,0	1/1:1,12:13:24.08:479,24,0	1/1:0,24:24:57.20:1138,57,0	1/1:1,23:24:66.23:1314,66,0	1/1:0,15:15:36.12:718,36,0	1/1:0,22:22:54.17:1011,54,0	1/1:0,6:6:15.05:299,15,0	1/1:0,28:28:72.25:1438,72,0	1/1:0,20:20:57.20:1138,57,0	1/1:0,22:22:53.86:1078,54,0	1/1:0,22:22:44.83:898,45,0	1/1:1,24:25:63.22:1252,63,0	1/1:0,22:22:51.16:1018,51,0	1/1:0,28:28:72.25:1438,72,0	1/1:2,12:14:36.10:671,36,0	1/1:0,9:9:12.04:233,12,0	1/1:3,32:35:46.51:902,47,0	1/1:0,12:12:30.10:599,30,0	1/1:1,9:10:20.88:419,21,0	1/1:0,23:23:50.91:1017,51,0	0/0:9,0:9:27.09:0,27,709	1/1:3,23:25:66.20:1270,66,0	1/1:0,22:22:54.19:1069,54,0	1/1:0,8:8:21.07:419,21,0
chr10	12967168	.	G	GT	6038.10	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=9.901;DP=641;FS=9.426;HRun=7;HaplotypeScore=243.5267;InbreedingCoeff=0.8827;MQ=60.73;MQ0=2;MQRankSum=-10.313;QD=11.41;ReadPosRankSum=0.236;VQSLOD=1.3831;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:81.07:0,81,768	1/1:11,0:10:17.31:122,17,0	0/0:27,0:24:55.79:0,56,483	0/0:22,0:20:15.33:0,15,273	1/1:34,0:32:30.59:279,31,0	1/1:12,0:12:19.35:128,19,0	1/1:22,0:20:21.53:293,22,0	1/1:26,6:30:13.91:269,14,0	1/1:30,1:30:58.06:514,58,0	1/1:25,0:25:42.65:267,43,0	1/1:22,0:21:33.06:226,33,0	1/1:24,0:25:39.28:289,39,0	1/1:13,0:11:25.33:143,25,0	1/1:22,0:23:41.15:294,41,0	1/1:19,0:19:32.64:298,33,0	1/1:24,1:25:54.68:408,55,0	1/1:22,0:21:28.40:291,28,0	1/1:32,0:30:36.24:366,36,0	1/1:15,4:15:0.47:106,0,0	1/1:14,8:25:26.92:290,27,0	1/1:12,3:14:9.02:100,9,0	1/1:18,0:15:13.91:169,14,0	1/1:16,0:18:21.53:127,22,0	1/1:21,0:21:18.61:234,19,0	0/0:28,0:28:72.10:0,72,690	1/1:34,0:35:52.69:523,53,0	1/1:24,0:20:33.08:234,33,0	1/1:4,0:4:8.91:66,9,0
chr10	12967173	.	TTTG	T	3523.58	PASS	AB=0.996;AC=28;AF=0.500;AN=56;BaseQRankSum=-2.228;DP=624;FS=0.713;HRun=0;HaplotypeScore=238.1209;InbreedingCoeff=-0.2115;MQ=56.69;MQ0=2;MQRankSum=-1.373;QD=7.06;ReadPosRankSum=-1.065;VQSLOD=2.8447;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:96.25:0,96,1830	0/1:10,0:9:18.53:30,0,19	0/0:30,0:24:37.29:0,37,781	0/0:20,0:18:45.13:0,45,639	0/1:33,0:31:3.52:180,0,4	0/1:12,1:13:55.29:119,0,55	1/1:18,3:19:27.31:483,27,0	0/1:32,0:30:87.87:292,0,88	0/1:31,0:30:53.02:185,0,53	0/1:26,0:25:48.97:127,0,49	0/1:22,0:21:0.56:121,0,1	0/1:23,0:23:42.93:108,0,43	0/0:14,0:12:8.54:0,9,46	0/1:21,0:21:17.76:176,0,18	0/1:19,0:19:25.48:111,0,25	0/1:24,0:24:48.27:156,0,48	0/1:23,0:22:32.99:158,0,33	1/1:31,0:29:10.71:255,11,0	0/1:18,0:14:66.12:66,0,69	0/1:27,0:26:82.41:82,0,169	1/1:10,0:9:9.78:123,10,0	0/1:16,0:13:1.23:87,0,1	0/1:17,0:17:58.52:146,0,59	0/1:21,0:21:0.99:163,0,1	0/0:27,0:27:72.20:0,72,1326	1/1:34,0:34:18.51:239,19,0	0/1:24,0:20:31.73:81,0,32	1/1:3,0:3:3.78:37,4,0
chr10	12967174	.	TTG	T	6829.38	PASS	AB=0.948;AC=39;AF=0.696;AN=56;BaseQRankSum=4.289;DP=611;FS=15.390;HRun=0;HaplotypeScore=216.4018;InbreedingCoeff=0.2300;MQ=55.88;MQ0=2;MQRankSum=-4.969;QD=13.60;ReadPosRankSum=2.192;VQSLOD=3.2512;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,99,1507	0/1:9,0:8:3.19:117,0,3	0/0:30,0:23:6.58:0,7,635	0/0:20,0:18:30.80:0,31,501	1/1:30,4:32:41.51:447,42,0	0/1:13,0:13:22.76:66,0,23	1/1:21,0:19:26.36:200,26,0	0/1:32,0:30:1.82:282,0,2	1/1:30,1:30:49.09:515,49,0	0/1:21,5:25:33.26:313,0,33	1/1:20,2:21:34.38:309,34,0	0/1:20,3:23:10.76:284,0,11	0/1:14,0:12:15.91:53,0,16	1/1:18,3:21:36.86:391,37,0	1/1:17,2:19:16.71:305,17,0	1/1:21,3:24:10.01:440,10,0	1/1:21,2:22:29.93:402,30,0	1/1:28,2:28:53.67:647,54,0	0/1:13,0:9:21.57:79,0,22	0/1:27,0:26:24.44:98,0,24	1/1:10,0:9:17.18:124,17,0	1/1:12,4:13:19.94:307,20,0	0/1:13,4:17:11.93:221,0,12	1/1:15,3:18:15.49:263,15,0	0/0:24,0:24:72.22:0,72,1139	1/1:31,2:33:76.29:626,76,0	1/1:18,5:19:1.01:251,1,0	1/1:2,1:3:9:91,9,0
chr10	12967175	.	TG	T	6656.89	PASS	AB=1.000;AC=47;AF=0.839;AN=56;BaseQRankSum=9.038;DP=608;FS=0.825;HRun=1;HaplotypeScore=208.7953;InbreedingCoeff=0.8029;MQ=54.95;MQ0=2;MQRankSum=-8.598;QD=13.31;ReadPosRankSum=-0.469;VQSLOD=3.8447;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,99,1204	1/1:9,0:8:7.37:97,7,0	0/0:29,0:22:24.46:0,24,506	0/0:20,0:18:28.89:0,29,390	1/1:33,2:33:64.04:407,64,0	0/1:13,0:13:7.11:116,0,7	1/1:21,0:19:42.45:327,42,0	1/1:23,8:29:35.67:322,36,0	1/1:29,2:30:65.57:506,66,0	1/1:25,0:24:25.58:283,26,0	1/1:20,2:21:50.67:349,51,0	1/1:22,0:22:47.01:280,47,0	1/1:14,0:12:18.98:89,19,0	1/1:21,0:21:51.15:375,51,0	1/1:17,2:19:25.58:291,26,0	1/1:23,1:24:41.40:399,41,0	1/1:23,0:22:32.81:301,33,0	1/1:30,0:28:60.51:483,61,0	1/1:13,0:9:13.45:122,13,0	1/1:23,4:26:38.50:218,39,0	1/1:8,2:9:23.64:172,24,0	1/1:16,0:13:34.91:228,35,0	1/1:16,1:17:2.09:203,2,0	1/1:18,0:18:25.36:209,25,0	0/0:24,0:24:72.21:0,72,924	1/1:33,0:33:86.61:563,87,0	1/1:22,1:19:39.52:250,40,0	1/1:3,0:3:8.96:68,9,0
chr10	12967176	.	G	GTTGTT	7399.88	PASS	AB=0.995;AC=37;AF=0.661;AN=56;BaseQRankSum=12.456;DP=611;FS=1.576;HRun=0;HaplotypeScore=256.5512;InbreedingCoeff=0.3625;MQ=54.75;MQ0=2;MQRankSum=-11.785;QD=15.32;ReadPosRankSum=4.119;VQSLOD=4.2323;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:93.30:0,93,1920	1/1:9,0:8:12.72:269,13,0	0/0:29,0:22:59.64:0,60,886	0/0:20,0:18:31.62:0,32,625	1/1:34,0:33:12.43:475,12,0	0/1:13,0:13:17.69:156,0,18	1/1:21,0:19:7.56:284,8,0	0/1:31,0:29:2.38:2,0,116	0/1:30,0:29:26.92:529,0,27	1/1:25,0:24:10.16:500,10,0	1/1:23,0:22:23.48:407,23,0	1/1:23,0:24:25.08:481,25,0	1/1:12,2:12:8.73:431,9,0	1/1:21,0:21:17.89:364,18,0	1/1:19,0:19:12.51:313,13,0	0/1:24,0:24:62.15:484,0,62	1/1:22,0:22:11.11:314,11,0	0/1:29,0:28:34.61:489,0,35	0/0:13,0:9:3.35:0,3,79	0/1:27,0:26:74.69:75,0,81	0/0:10,0:9:4.21:0,4,20	0/1:16,0:13:24.29:202,0,24	1/1:16,0:18:19.57:150,20,0	1/1:19,1:20:31.96:415,32,0	0/0:23,0:23:66.21:0,66,1313	1/1:33,0:33:61.32:653,61,0	1/1:23,1:20:12.53:373,13,0	1/1:3,0:3:4.49:34,4,0
chr10	12967178	.	TTTTG	T	5108.47	PASS	AB=0.956;AC=34;AF=0.607;AN=56;BaseQRankSum=3.147;DP=613;FS=5.635;HRun=0;HaplotypeScore=245.3954;InbreedingCoeff=0.0236;MQ=53.58;MQ0=3;MQRankSum=-6.112;QD=10.08;ReadPosRankSum=-3.388;VQSLOD=2.9543;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:93.32:0,93,2357	0/1:9,0:8:0.33:69,0,0	0/0:30,0:22:49.06:0,49,808	0/0:21,0:19:34.36:0,34,647	1/1:33,3:34:21.95:463,22,0	0/1:9,0:13:2.17:2,0,131	1/1:10,0:19:3.24:114,3,0	0/1:24,5:27:82.40:292,0,82	0/1:27,2:28:21.62:208,0,22	0/1:26,1:26:10.51:275,0,11	1/1:19,3:21:21.21:288,21,0	0/1:21,2:23:3.50:232,0,4	0/1:14,0:12:31.84:32,0,40	0/1:20,1:21:17.41:273,0,17	1/1:20,0:20:29.02:255,29,0	0/1:23,0:23:27.52:177,0,28	0/1:21,2:22:3.05:255,0,3	1/1:29,1:28:44.30:506,44,0	0/1:13,0:9:49.46:84,0,49	0/1:26,2:26:95.25:106,0,95	1/1:9,0:8:12.51:131,13,0	1/1:16,1:14:5.45:163,5,0	0/1:18,1:19:37.77:201,0,38	1/1:19,1:20:23.70:250,24,0	0/0:22,0:22:60.20:0,60,1424	1/1:32,3:34:50.27:562,50,0	0/1:22,1:19:4.71:128,0,5	1/1:3,0:3:5.23:41,5,0
chr10	12967179	.	T	TG	6706.59	PASS	AB=0.847;AC=31;AF=0.554;AN=56;BaseQRankSum=5.027;DP=610;FS=23.826;HRun=0;HaplotypeScore=213.9178;InbreedingCoeff=-0.1723;MQ=52.63;MQ0=3;MQRankSum=-6.959;QD=14.12;ReadPosRankSum=7.131;VQSLOD=4.1837;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:93.30:0,93,1283	1/1:5,4:8:0.46:153,0,0	0/0:30,0:22:54.17:0,54,694	0/0:20,0:18:32.88:0,33,466	0/1:23,12:34:43.52:439,0,44	0/1:13,0:13:65.08:65,0,89	0/1:20,0:18:6.36:122,0,6	0/0:26,0:27:0.45:0,0,170	0/1:14,15:28:45.74:554,0,46	0/1:20,7:26:35.67:329,0,36	1/1:13,8:20:7.89:336,8,0	0/1:17,6:23:49.32:303,0,49	0/1:11,2:11:55.33:55,0,61	1/1:12,9:21:9.97:410,10,0	0/1:13,8:21:36.90:377,0,37	0/1:14,9:23:22.14:480,0,22	0/1:13,10:22:30.97:392,0,31	1/1:15,15:28:32.90:649,33,0	0/1:13,0:9:13.81:14,0,101	0/1:26,0:26:22.14:22,0,156	0/1:8,0:8:11.18:11,0,38	1/1:10,6:13:11.32:303,11,0	0/1:16,2:18:57.43:155,0,57	1/1:14,8:22:5:341,5,0	0/0:23,0:23:66.20:0,66,893	1/1:16,18:33:26.66:840,27,0	0/1:18,5:19:31.66:232,0,32	1/1:1,2:3:9.03:126,9,0
chr10	12967181	.	TG	T	7043.32	PASS	AB=0.947;AC=44;AF=0.786;AN=56;BaseQRankSum=11.681;DP=601;FS=3.284;HRun=1;HaplotypeScore=211.1953;InbreedingCoeff=0.5466;MQ=51.39;MQ0=3;MQRankSum=-10.112;QD=14.11;ReadPosRankSum=3.903;VQSLOD=4.8758;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:93.31:0,93,1295	1/1:7,3:9:20.58:178,21,0	0/0:29,0:20:42.35:0,42,527	0/0:20,0:18:35.03:0,35,395	1/1:30,6:34:46.22:448,46,0	0/1:14,0:14:3.07:58,0,3	1/1:20,0:18:11.57:229,12,0	1/1:28,1:27:0.65:166,1,0	1/1:23,4:26:52.04:559,52,0	0/1:22,5:26:9.47:359,0,9	1/1:18,3:20:45.34:374,45,0	1/1:19,4:23:45.33:436,45,0	1/1:7,6:11:22.70:260,23,0	1/1:15,5:20:38.72:323,39,0	1/1:16,4:20:32.64:376,33,0	1/1:21,2:23:13.12:349,13,0	1/1:20,3:22:24.64:360,25,0	1/1:26,3:27:68.89:590,69,0	1/1:11,0:8:1.44:63,1,0	1/1:26,0:24:12.07:128,12,0	1/1:9,0:8:14.79:96,15,0	1/1:13,3:13:26.60:218,27,0	0/1:16,1:17:21.71:174,0,22	1/1:23,1:24:23.77:239,24,0	0/0:21,0:21:63.11:0,63,819	1/1:29,6:34:67.05:673,67,0	1/1:16,7:19:29.36:350,29,0	0/1:3,0:3:3.66:37,0,4
chr10	12967182	.	G	GTT	11833.68	PASS	AB=1.000;AC=47;AF=0.839;AN=56;BaseQRankSum=10.585;DP=609;FS=4.899;HRun=5;HaplotypeScore=213.5642;InbreedingCoeff=0.8347;MQ=49.03;MQ0=5;MQRankSum=-9.593;QD=23.25;ReadPosRankSum=-0.284;VQSLOD=1.8742;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:93.23:0,93,1178	1/1:7,3:9:22.07:237,22,0	0/0:26,0:18:34.37:0,34,417	0/0:20,0:18:30.38:0,30,306	1/1:21,12:34:63.20:656,63,0	0/1:11,0:13:10.81:42,0,11	1/1:19,0:18:29.90:189,30,0	1/1:23,8:29:53.89:571,54,0	1/1:13,13:27:66.42:843,66,0	1/1:22,3:26:54.06:508,54,0	1/1:9,8:20:52.50:638,53,0	1/1:16,6:24:59.13:604,59,0	1/1:11,2:11:23.25:188,23,0	1/1:12,6:21:57.72:544,58,0	1/1:12,7:21:27.40:472,27,0	1/1:12,9:24:39.58:606,40,0	1/1:14,8:22:45.53:597,46,0	1/1:16,12:27:70.90:938,71,0	1/1:7,5:8:24.05:372,24,0	1/1:11,14:24:55.19:781,55,0	1/1:4,5:8:12.95:159,13,0	1/1:7,7:13:32.81:413,33,0	1/1:12,1:17:7.43:255,7,0	1/1:14,7:24:47.46:519,47,0	0/0:21,0:21:54.17:0,54,687	1/1:17,17:35:98.36:1217,98,0	1/1:15,4:19:38.19:403,38,0	1/1:1,1:3:8.04:82,8,0
chr10	12967193	.	TTTG	T	2283.38	PASS	AB=0.962;AC=22;AF=0.393;AN=56;BaseQRankSum=-2.253;DP=591;FS=20.072;HRun=0;HaplotypeScore=237.4029;InbreedingCoeff=-0.4513;MQ=46.04;MQ0=7;MQRankSum=-0.403;QD=4.90;ReadPosRankSum=-1.889;VQSLOD=0.7804;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:84.08:0,84,1446	0/1:12,0:11:55.67:111,0,56	0/0:21,0:11:8.04:0,8,278	0/0:19,0:17:20.53:0,21,305	0/1:34,1:33:99:327,0,101	0/1:13,0:13:2.09:67,0,2	1/1:17,0:15:28.17:143,28,0	0/1:34,0:32:9.84:10,0,273	0/1:26,2:27:38.12:38,0,349	0/1:24,0:22:73.61:155,0,74	0/1:21,2:22:99:159,0,181	0/1:24,0:24:99:113,0,141	0/1:13,1:12:53.27:53,0,97	0/1:18,0:18:47.99:48,0,128	0/1:14,5:18:91.57:92,0,165	0/1:23,0:23:99:134,0,155	0/1:18,2:19:99:122,0,198	0/1:30,0:28:99:171,0,125	0/1:16,0:11:0.33:0,0,169	0/0:25,0:24:33.22:0,33,445	0/0:9,0:7:16.02:0,16,98	0/1:13,1:11:71.14:71,0,99	0/1:14,1:15:67.96:135,0,68	0/1:23,0:23:49.10:166,0,49	0/0:18,0:18:54.14:0,54,910	0/1:36,4:38:99:305,0,483	0/1:23,0:19:26.39:26,0,182	0/0:2,0:2:5.05:0,5,39
chr10	12967194	.	TTG	T	1692.76	PASS	AB=0.992;AC=22;AF=0.393;AN=56;BaseQRankSum=-0.801;DP=590;FS=18.467;HRun=0;HaplotypeScore=230.6811;InbreedingCoeff=-0.3771;MQ=46.25;MQ0=7;MQRankSum=-1.315;QD=3.86;ReadPosRankSum=-0.596;VQSLOD=1.4472;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:84.07:0,84,1182	0/1:13,0:12:34.91:78,0,35	0/0:22,0:12:8.29:0,8,244	0/0:18,0:16:12.26:0,12,239	0/1:34,1:33:59.20:210,0,59	1/1:10,3:13:17.79:149,18,0	1/1:14,3:15:18.39:96,18,0	0/1:33,0:31:49.40:49,0,200	0/0:28,0:27:12.32:0,12,264	0/1:25,0:23:46.40:115,0,46	0/1:22,1:22:87.02:87,0,117	0/1:24,0:24:54.38:100,0,54	0/1:14,0:12:54.04:63,0,54	0/1:17,1:18:50.93:51,0,84	0/1:19,0:18:42.38:42,0,110	0/1:23,0:23:80.39:80,0,110	0/1:19,0:18:66.61:67,0,115	0/1:31,0:28:99:113,0,109	0/1:16,0:11:31.94:32,0,123	0/0:23,0:22:25.61:0,26,264	0/0:9,0:7:15.33:0,15,82	0/1:14,0:11:29.07:29,0,80	0/1:15,0:15:37.17:110,0,37	0/1:23,0:23:22.23:101,0,22	0/0:19,0:19:57.07:0,57,759	0/1:40,1:39:99:260,0,389	0/1:23,0:19:29.20:29,0,108	0/0:2,0:2:4.96:0,5,23
chr10	12967196	.	G	GTTTTT	14310.16	PASS	AB=1.000;AC=49;AF=0.875;AN=56;BaseQRankSum=10.278;DP=598;FS=8.541;HRun=9;HaplotypeScore=230.1630;InbreedingCoeff=0.8169;MQ=44.18;MQ0=7;MQRankSum=-8.666;QD=27.10;ReadPosRankSum=-2.004;VQSLOD=0.1033;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:52.30:0,52,1107	1/1:8,3:11:30.06:561,30,0	0/1:23,0:12:8.71:9,0,192	0/0:18,0:15:17.91:0,18,220	1/1:29,6:33:65.48:1002,65,0	1/1:14,0:14:22.56:209,23,0	1/1:16,0:14:17.55:168,18,0	1/1:17,0:30:56.58:328,57,0	1/1:19,9:27:57.46:945,57,0	1/1:19,4:23:50.95:900,51,0	1/1:18,4:23:47.99:804,48,0	1/1:19,3:24:50.99:866,51,0	1/1:10,4:12:30.81:574,31,0	1/1:15,2:18:37.69:506,38,0	1/1:15,1:18:38.51:513,39,0	1/1:17,5:23:37.21:935,37,0	1/1:15,2:18:40.28:621,40,0	1/1:26,5:28:73.42:1087,73,0	1/1:14,0:14:6.62:161,7,0	1/1:17,0:23:47.92:311,48,0	1/1:6,0:6:14.25:78,14,0	1/1:8,5:10:25.56:489,26,0	1/1:14,0:14:31.73:442,32,0	1/1:20,3:24:44.95:827,45,0	0/0:19,0:20:49.27:0,49,706	1/1:37,2:38:99:1343,102,0	1/1:18,3:19:29.92:500,30,0	1/1:5,0:6:14.98:131,15,0
chr10	12967625	.	G	GC	3396.87	PASS	AB=0.888;AC=49;AF=0.875;AN=56;BaseQRankSum=6.083;DP=459;FS=5.097;HRun=10;HaplotypeScore=108.1127;InbreedingCoeff=0.5838;MQ=76.14;MQ0=0;MQRankSum=-4.309;QD=7.90;ReadPosRankSum=3.491;VQSLOD=2.2611;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:23,2:25:30.37:30,0,188	1/1:6,0:6:10.88:49,11,0	0/0:15,0:15:21.06:0,21,133	0/1:14,0:14:1.11:1,0,159	1/1:13,0:13:21.34:86,21,0	1/1:15,0:15:32.06:129,32,0	1/1:19,0:19:43.14:178,43,0	0/1:8,5:14:11.81:12,0,64	1/1:15,0:15:29.46:119,29,0	1/1:13,0:13:28.77:114,29,0	1/1:17,0:17:29.54:124,30,0	1/1:16,0:16:32.81:149,33,0	1/1:7,0:7:15.99:64,16,0	1/1:16,0:16:26.65:110,27,0	1/1:29,0:24:48.06:200,48,0	1/1:18,0:17:40.29:169,40,0	1/1:31,0:31:75.24:307,75,0	1/1:21,0:21:48.11:194,48,0	1/1:3,3:6:9.02:95,9,0	1/1:0,7:7:15.04:160,15,0	1/1:9,13:22:20.89:206,21,0	1/1:17,0:17:26.70:108,27,0	1/1:13,0:13:29.30:118,29,0	1/1:25,0:25:48.45:200,48,0	0/0:14,0:14:35.95:0,36,296	1/1:23,0:23:50.31:205,50,0	1/1:18,0:18:45.53:185,46,0	1/1:9,0:9:21.43:86,21,0
chr10	12967627	.	C	CCT	13204.78	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=3.002;DP=465;FS=10.523;HRun=0;HaplotypeScore=84.9924;InbreedingCoeff=0.9908;MQ=74.31;MQ0=0;MQRankSum=-6.302;QD=38.16;ReadPosRankSum=6.373;VQSLOD=6.7248;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:51.12:0,51,579	1/1:6,0:6:14.83:180,15,0	0/0:13,0:13:38.37:0,38,405	0/0:16,0:16:35.74:0,36,434	1/1:14,0:14:27.08:413,27,0	1/1:14,0:14:39.12:607,39,0	1/1:19,0:19:57.15:840,57,0	0/0:14,0:14:27.87:0,28,285	1/1:15,0:15:39.10:581,39,0	1/1:10,0:12:33.06:505,33,0	1/1:12,7:19:36.02:542,36,0	1/1:16,0:16:42.05:564,42,0	1/1:9,0:9:27.06:377,27,0	1/1:16,0:16:32.61:465,33,0	1/1:30,0:25:66.09:947,66,0	1/1:16,0:16:48.15:729,48,0	1/1:32,0:32:90.20:1391,90,0	1/1:20,0:20:57.15:892,57,0	0/0:6,0:6:13.78:0,14,79	0/0:7,0:7:18.85:0,19,94	0/0:22,0:21:20.83:0,21,219	1/1:17,0:17:33.10:497,33,0	1/1:14,0:14:36.11:555,36,0	1/1:25,0:26:69.09:974,69,0	0/0:15,0:15:39.12:0,39,577	1/1:22,0:23:66.17:941,66,0	1/1:17,0:18:51.16:812,51,0	1/1:9,0:9:24.08:391,24,0
chr10	12967628	.	C	CT	7620.98	PASS	AB=1.000;AC=42;AF=0.750;AN=56;BaseQRankSum=8.137;DP=463;FS=19.506;HRun=0;HaplotypeScore=95.4963;InbreedingCoeff=0.8194;MQ=76.17;MQ0=0;MQRankSum=-5.062;QD=21.35;ReadPosRankSum=7.894;VQSLOD=4.4437;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:30.47:0,30,533	1/1:0,5:5:14.64:111,15,0	0/0:14,0:14:39:0,39,408	0/0:18,0:18:39.96:0,40,468	1/1:2,12:14:25.84:230,26,0	1/1:2,12:14:39.05:366,39,0	1/1:4,15:19:56.85:477,57,0	0/0:12,0:12:27.84:0,28,268	1/1:5,9:14:36.39:313,36,0	1/1:3,10:13:20.94:311,21,0	1/1:7,10:17:21.96:301,22,0	1/1:3,12:16:41.16:370,41,0	1/1:3,6:9:25.66:211,26,0	1/1:6,10:16:30.17:257,30,0	1/1:7,23:25:49.76:549,50,0	1/1:3,14:16:47.99:450,48,0	1/1:2,30:32:66.08:766,66,0	1/1:2,18:20:59.99:541,60,0	0/1:5,0:5:1.77:2,0,38	0/1:7,0:7:14.83:15,0,30	0/0:22,0:21:4:0,4,164	1/1:4,13:17:32.96:291,33,0	1/1:1,13:14:34.80:302,35,0	1/1:7,19:26:65.79:557,66,0	0/0:15,0:15:39.12:0,39,529	1/1:4,20:25:63.92:560,64,0	1/1:1,17:18:50.80:431,51,0	1/1:1,8:9:23.92:209,24,0
chr10	12967631	.	C	CT	7398.46	PASS	AB=1.000;AC=43;AF=0.768;AN=56;BaseQRankSum=7.829;DP=460;FS=16.679;HRun=0;HaplotypeScore=94.8425;InbreedingCoeff=0.7945;MQ=75.53;MQ0=0;MQRankSum=-5.338;QD=20.78;ReadPosRankSum=7.555;VQSLOD=5.2578;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:21.50:0,22,479	1/1:0,5:5:2.06:60,2,0	0/0:15,0:15:41.25:0,41,414	0/0:17,0:17:39.97:0,40,479	1/1:3,12:15:27.01:242,27,0	1/1:1,12:13:36.03:329,36,0	1/1:4,15:19:50.70:424,51,0	0/0:12,0:12:21.44:0,21,218	1/1:4,9:13:38.99:344,39,0	1/1:5,9:14:39:371,39,0	1/1:8,10:18:30.30:312,30,0	1/1:2,13:15:30.43:261,30,0	1/1:2,6:8:23.96:209,24,0	1/1:3,10:13:23.02:255,23,0	1/1:6,23:24:44.40:487,44,0	1/1:3,14:16:46.21:409,46,0	1/1:4,30:34:94.19:831,94,0	1/1:3,18:21:62.89:536,63,0	1/1:4,0:4:4.61:12,5,0	0/1:7,0:7:18.27:18,0,18	0/0:21,0:20:1.03:0,1,142	1/1:6,12:18:34.96:283,35,0	1/1:1,13:14:35.94:311,36,0	1/1:7,19:26:21.57:457,22,0	0/0:16,0:16:45.13:0,45,583	1/1:9,17:26:71.74:621,72,0	1/1:1,17:18:53.68:433,54,0	1/1:1,8:9:23.38:193,23,0
chr10	12967735	.	GAAA	G	3959.40	PASS	AB=0.609;AC=37;AF=0.661;AN=56;BaseQRankSum=-1.654;DP=473;FS=17.857;HRun=13;HaplotypeScore=65.0577;InbreedingCoeff=0.7486;MQ=55.05;MQ0=21;MQRankSum=0.311;QD=14.04;ReadPosRankSum=5.459;VQSLOD=0.3554;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:29:63.20:0,63,1135	1/1:1,4:5:9.03:106,9,0	0/0:35,0:6:5.08:0,5,66	0/0:47,0:11:17.48:0,17,189	1/1:5,20:23:23.86:273,24,0	0/0:4,0:11:4.98:0,5,12	0/1:5,1:12:5.28:27,0,5	0/0:8,0:16:31.99:0,32,324	1/1:6,5:10:8.98:109,9,0	1/1:4,9:12:20.80:240,21,0	1/1:6,7:10:11.95:144,12,0	1/1:7,11:17:11.94:146,12,0	1/1:1,3:4:3.01:36,3,0	1/1:3,7:10:15.02:182,15,0	1/1:6,8:15:9.55:123,10,0	1/1:4,6:10:9:109,9,0	1/1:5,27:32:62.81:758,63,0	1/1:5,17:22:42.08:507,42,0	0/0:7,0:12:23.93:0,24,217	0/0:3,0:8:6.45:0,6,46	0/0:9,0:13:8.95:0,9,67	1/1:4,15:18:24.03:292,24,0	1/1:4,10:9:2.95:36,3,0	1/1:4,9:13:20.96:236,21,0	0/0:11,0:10:24.07:0,24,414	1/1:5,11:16:23.98:273,24,0	1/1:3,16:19:25.06:325,25,0	1/1:4,2:5:2.68:35,3,0
chr10	12967746	.	AAAG	A	1320.54	PASS	AB=0.983;AC=22;AF=0.393;AN=56;BaseQRankSum=8.457;DP=531;FS=30.484;HRun=0;HaplotypeScore=79.6116;InbreedingCoeff=-0.3418;MQ=55.68;MQ0=26;MQRankSum=-1.561;QD=3.83;ReadPosRankSum=9.734;VQSLOD=-0.4741;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:72.12:0,72,1183	0/1:5,0:5:12.94:37,0,13	0/1:61,0:11:0.98:1,0,50	0/0:62,0:15:24.51:0,25,213	0/1:26,0:23:61.57:95,0,62	0/1:11,0:11:6.14:6,0,25	0/1:13,0:12:23.20:23,0,50	0/0:21,0:21:44.43:0,44,505	0/1:10,0:9:31.33:31,0,36	0/1:17,0:16:26.42:26,0,129	0/1:14,1:13:58.77:59,0,84	0/1:15,0:14:44.99:52,0,45	0/1:5,0:5:10.78:11,0,26	0/1:12,0:12:57.76:64,0,58	0/1:13,0:13:37.36:38,0,37	1/1:6,0:6:8.66:50,9,0	0/1:36,1:36:27.29:328,0,27	0/1:25,0:25:64.82:190,0,65	0/0:16,0:12:32.99:0,33,308	0/0:17,0:16:24.79:0,25,225	0/0:13,0:12:21:0,21,196	0/1:17,0:17:10.15:103,0,10	0/0:14,0:10:1.14:0,1,99	1/1:12,0:12:8.52:97,9,0	0/0:13,0:12:31.28:0,31,480	0/1:15,0:14:21.24:68,0,21	0/1:23,0:23:47.93:157,0,48	0/1:5,2:6:25.69:45,0,26
chr10	12970266	.	C	CCT	2664.86	PASS	AB=0.624;AC=27;AF=0.482;AN=56;BaseQRankSum=10.031;DP=450;FS=4.859;HRun=0;HaplotypeScore=78.4635;InbreedingCoeff=-0.4820;MQ=62.26;MQ0=3;MQRankSum=-0.869;QD=7.13;ReadPosRankSum=5.661;VQSLOD=2.2970;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:37:90.26:0,90,1262	0/1:5,0:8:53.94:70,0,54	0/0:11,0:10:26.47:0,26,307	0/0:8,0:7:11.90:0,12,147	0/1:6,0:16:19.20:145,0,19	0/1:6,0:30:35.94:230,0,36	1/1:5,0:13:31.82:198,32,0	0/1:13,0:30:99:206,0,136	0/1:4,1:16:24.02:175,0,24	0/1:4,0:12:57.24:76,0,57	0/1:3,1:13:54.42:96,0,54	0/1:9,0:20:99:169,0,121	1/1:2,0:5:8.82:57,9,0	0/1:6,0:13:38.60:39,0,109	0/1:5,0:21:9.79:201,0,10	0/1:5,1:18:65.33:65,0,107	0/1:4,1:20:61.12:170,0,61	0/1:9,0:22:79.82:160,0,80	0/1:5,0:14:38.28:38,0,126	0/1:5,0:15:34.96:145,0,35	0/1:4,0:7:17.12:17,0,81	0/1:3,0:3:10.61:11,0,46	0/1:5,0:11:39.39:39,0,43	0/1:3,0:10:33.34:91,0,33	0/0:19,0:19:57.14:0,57,815	0/1:4,0:21:52.86:138,0,53	1/1:10,0:20:25.30:208,25,0	0/1:2,0:8:5.01:87,0,5
chr10	12970899	.	GCC	G	3884.49	PASS	AB=0.600;AC=44;AF=0.786;AN=56;BaseQRankSum=-0.867;DP=422;FS=30.726;HRun=13;HaplotypeScore=71.3127;InbreedingCoeff=0.6152;MQ=79.47;MQ0=3;MQRankSum=-1.641;QD=10.94;ReadPosRankSum=4.855;VQSLOD=0.1527;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:14:12.46:0,12,140	0/1:1,4:6:8.48:84,0,8	0/0:17,0:15:25.29:0,25,223	0/0:21,0:20:20.02:0,20,230	0/0:7,0:8:8.17:0,8,44	1/1:3,0:18:29.93:131,30,0	1/1:2,0:30:63.10:275,63,0	1/1:12,0:17:9.86:40,10,0	1/1:6,12:18:32.97:320,33,0	1/1:3,2:6:5.97:58,6,0	1/1:2,2:4:6:58,6,0	0/1:8,6:17:35.57:172,0,36	1/1:5,9:14:23.99:233,24,0	1/1:6,11:17:14.84:194,15,0	1/1:3,7:13:29.24:239,29,0	1/1:5,11:19:2.64:241,3,0	1/1:6,15:23:32.50:352,33,0	1/1:9,12:23:32.92:286,33,0	1/1:6,0:16:23.94:99,24,0	1/1:3,1:8:10.67:59,11,0	1/1:15,1:37:33.03:159,33,0	1/1:2,7:9:5.96:58,6,0	1/1:4,3:9:11.64:98,12,0	1/1:4,13:19:22.65:377,23,0	0/0:6,0:6:6.01:0,6,68	1/1:7,6:14:8.83:137,9,0	1/1:6,6:13:17.26:156,17,0	1/1:1,2:3:6.01:58,6,0
chr10	12971576	.	A	ACG	1916.58	PASS	AB=0.986;AC=25;AF=0.463;AN=54;BaseQRankSum=-0.913;DP=467;FS=0.000;HRun=0;HaplotypeScore=140.1278;InbreedingCoeff=0.1648;MQ=58.76;MQ0=4;MQRankSum=2.662;QD=6.16;ReadPosRankSum=0.660;VQSLOD=3.2127;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:53.33:0,53,704	1/1:12,0:12:14.17:107,14,0	0/0:14,0:9:18.04:0,18,230	0/0:14,0:11:21.04:0,21,279	0/1:20,3:23:4.81:320,0,5	0/0:14,0:14:8.03:0,8,38	1/1:19,0:19:13.05:183,13,0	0/0:23,0:22:56.80:0,57,467	0/1:21,0:21:12.25:118,0,12	0/1:19,0:19:16.44:128,0,16	1/1:15,0:15:8.77:145,9,0	0/1:28,0:28:18.88:103,0,19	0/1:14,0:14:10.31:88,0,10	0/1:16,0:16:16.04:35,0,16	1/1:18,0:18:12.41:70,12,0	1/1:18,0:18:13.99:86,14,0	1/1:13,0:12:11.81:97,12,0	1/1:15,0:15:9.74:119,10,0	0/0:13,0:10:23.85:0,24,196	0/0:23,0:23:60.83:0,61,535	./.	0/1:5,0:5:18.46:51,0,18	0/1:13,0:13:9.48:69,0,9	0/1:16,0:16:11.26:79,0,11	0/0:16,0:16:36.12:0,36,515	0/1:24,0:24:24.36:125,0,24	0/1:21,1:21:19.73:177,0,20	0/0:7,0:7:3.74:0,4,12
chr10	12971578	.	GCA	G	5392.77	PASS	AB=0.894;AC=37;AF=0.685;AN=54;BaseQRankSum=-2.139;DP=452;FS=3.846;HRun=0;HaplotypeScore=127.4343;InbreedingCoeff=0.2966;MQ=55.05;MQ0=4;MQRankSum=0.116;QD=14.19;ReadPosRankSum=0.823;VQSLOD=4.5095;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:53.48:0,53,784	1/1:10,2:12:21.22:303,21,0	0/0:12,0:7:15.03:0,15,259	0/0:13,0:10:23.53:0,24,353	1/1:21,2:24:32.45:531,32,0	0/1:5,9:14:13.66:27,0,14	1/1:18,1:19:31.23:311,31,0	0/1:21,0:20:0.05:1,0,0	1/1:20,1:21:14.11:363,14,0	0/1:18,0:18:9.33:283,0,9	1/1:15,0:15:30.06:391,30,0	0/1:24,1:25:41.95:304,0,42	0/1:12,1:13:4.77:227,0,5	0/1:14,4:18:5.23:200,0,5	1/1:14,4:18:20.70:200,21,0	1/1:15,3:18:14.29:287,14,0	1/1:10,2:11:26.84:286,27,0	1/1:11,2:13:28.08:344,28,0	0/1:10,0:8:2.40:7,0,2	0/1:17,0:22:50.77:51,0,77	./.	1/1:5,0:6:7.70:42,8,0	1/1:13,0:13:20.34:246,20,0	0/1:16,0:16:22.66:182,0,23	0/0:17,0:17:38.53:0,39,523	1/1:21,2:23:17.54:403,18,0	1/1:16,4:21:1.64:313,2,0	1/1:0,7:7:6.02:92,6,0
chr10	12971582	.	GCA	G	512.16	PASS	AB=0.976;AC=18;AF=0.360;AN=50;BaseQRankSum=4.715;DP=476;FS=13.499;HRun=0;HaplotypeScore=153.2101;InbreedingCoeff=-0.3750;MQ=47.95;MQ0=8;MQRankSum=-5.692;QD=1.68;ReadPosRankSum=-3.705;VQSLOD=0.9175;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:26,3:28:34.60:35,0,302	0/1:13,0:13:1.73:2,0,59	./.	0/0:12,0:7:0:0,0,0	0/1:23,0:23:78.29:78,0,87	0/1:17,0:17:21.64:22,0,74	0/0:18,0:18:9.39:0,9,153	./.	0/1:20,0:20:26.72:27,0,39	0/0:20,0:19:23.94:0,24,259	0/1:15,0:15:20.20:20,0,20	0/1:28,1:29:38.05:38,0,195	0/0:13,0:13:8.15:0,8,99	0/1:17,0:17:28.43:28,0,126	0/1:19,0:19:91.97:92,0,114	0/1:21,0:21:62.92:63,0,147	0/0:13,0:12:10.36:0,10,59	0/0:14,0:14:5.81:0,6,101	0/1:11,0:8:1.44:9,0,1	0/1:22,0:22:30.86:66,0,31	./.	0/1:8,0:8:13.93:14,0,81	0/1:14,0:14:36.08:36,0,117	0/0:16,0:16:17.73:0,18,199	0/1:12,6:18:99:106,0,197	0/0:24,0:24:37.97:0,38,330	0/1:22,0:21:8.87:9,0,129	1/1:7,0:7:3.28:9,3,0
chr10	12971617	.	C	CCTTT	5692.50	PASS	AB=0.910;AC=27;AF=0.482;AN=56;BaseQRankSum=11.535;DP=461;FS=29.453;HRun=0;HaplotypeScore=156.8322;InbreedingCoeff=-0.5467;MQ=52.94;MQ0=11;MQRankSum=-9.383;QD=15.18;ReadPosRankSum=-0.318;VQSLOD=2.7538;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:31:66.07:0,66,1152	0/1:9,0:9:28.74:29,0,38	0/0:22,0:8:17.05:0,17,270	0/0:20,0:10:18.82:0,19,413	0/1:19,1:20:88.41:207,0,88	0/1:8,10:18:60.84:661,0,61	0/1:13,7:20:99:388,0,190	0/1:16,2:15:99:107,0,229	1/1:15,1:16:9.39:145,9,0	0/1:14,1:15:99:211,0,228	0/1:9,0:9:18.48:53,0,18	0/1:23,2:25:68.10:545,0,68	0/1:10,0:10:45.10:68,0,45	0/1:21,0:21:9.01:190,0,9	0/1:23,0:24:95.02:407,0,95	0/1:21,1:22:37.66:466,0,38	0/1:16,0:16:8.11:165,0,8	0/1:13,0:13:99:169,0,103	0/1:7,3:10:62.43:309,0,62	1/1:11,1:12:1.98:276,2,0	1/1:8,0:7:3.01:42,3,0	0/1:9,1:10:99:102,0,107	0/1:8,3:11:99:164,0,167	0/1:12,2:14:21.98:22,0,189	0/0:12,0:12:30.09:0,30,487	0/1:28,0:28:99:607,0,301	0/1:18,1:19:99:295,0,140	0/1:5,1:6:27.93:66,0,28
chr10	12971619	.	C	CCTTTACCTTTTT	31473.88	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=0.328;DP=531;FS=24.349;HRun=0;HaplotypeScore=177.1532;InbreedingCoeff=0.9213;MQ=51.91;MQ0=11;MQRankSum=-8.722;QD=70.89;ReadPosRankSum=-2.580;VQSLOD=2.5109;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:63.18:0,63,1902	1/1:6,5:11:11.96:437,12,0	0/0:22,0:8:15.51:0,16,466	0/0:21,0:11:14.39:0,14,655	1/1:12,11:24:32.98:1096,33,0	1/1:7,1:18:48.08:2160,48,0	1/1:17,0:24:58.21:2038,58,0	1/1:29,0:28:68.70:2267,69,0	1/1:7,11:21:27.56:1151,28,0	1/1:12,8:22:44.96:1951,45,0	1/1:4,6:10:12.04:531,12,0	1/1:14,13:31:60.82:3134,61,0	1/1:5,7:12:14.49:694,14,0	1/1:11,12:26:40.78:1681,41,0	1/1:7,18:26:36.07:1677,36,0	1/1:7,15:25:36.12:1839,36,0	1/1:8,8:16:27.09:1266,27,0	1/1:12,2:14:15.50:737,15,0	1/1:9,0:12:35.86:1203,36,0	1/1:12,0:13:38.87:1053,39,0	1/1:5,6:11:12.04:494,12,0	1/1:5,0:7:9.03:433,9,0	1/1:8,1:12:22.32:906,22,0	1/1:14,0:16:18.02:587,18,0	0/0:14,0:14:27.07:0,27,770	1/1:13,17:33:59.69:2862,60,0	1/1:7,13:21:20.67:1062,21,0	1/1:4,0:5:8.92:216,9,0
chr10	12971624	.	A	ACCTTTTTCTT	18988.77	PASS	AB=1.000;AC=35;AF=0.625;AN=56;BaseQRankSum=11.048;DP=480;FS=31.758;HRun=0;HaplotypeScore=198.5698;InbreedingCoeff=-0.0712;MQ=53.67;MQ0=11;MQRankSum=-12.463;QD=48.32;ReadPosRankSum=6.062;VQSLOD=3.0158;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:75.17:0,75,1986	1/1:8,0:8:11.99:288,12,0	0/0:24,0:10:20.20:0,20,487	0/0:22,0:12:10.72:0,11,612	1/1:19,0:19:2.67:583,3,0	0/1:19,0:19:31.64:1290,0,32	0/1:25,0:25:48.70:1347,0,49	0/1:33,0:30:29.04:1334,0,29	0/1:15,0:15:32.13:631,0,32	0/1:17,0:16:13.03:908,0,13	0/1:9,0:9:31.97:271,0,32	1/1:27,0:28:37.85:1961,38,0	0/1:11,0:11:28.91:460,0,29	1/1:24,0:24:38.32:1058,38,0	1/1:21,0:22:36.07:1053,36,0	0/1:20,0:20:44.33:1077,0,44	1/1:18,0:17:5.61:702,6,0	0/1:13,0:13:95.33:562,0,95	1/1:13,0:13:37.24:996,37,0	1/1:13,0:13:39.06:610,39,0	0/1:11,0:10:67.52:234,0,68	0/1:8,0:8:61.97:230,0,62	0/1:11,0:11:11.13:593,0,11	1/1:8,4:13:4.65:386,5,0	0/0:14,0:14:42.11:0,42,935	0/1:25,0:25:40.03:1545,0,40	1/1:15,0:15:3.08:732,3,0	1/1:3,0:3:6.85:138,7,0
chr10	12972408	.	T	TC	21355.94	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-12.134;DP=656;FS=3.857;HRun=2;HaplotypeScore=59.3443;InbreedingCoeff=0.9988;MQ=86.12;MQ0=0;MQRankSum=-7.152;QD=37.66;ReadPosRankSum=2.585;VQSLOD=5.5934;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:96.29:0,96,1178	1/1:0,13:13:39.13:561,39,0	0/0:19,0:19:54.15:0,54,648	0/0:25,0:25:66.15:0,66,775	1/1:0,15:15:33.11:475,33,0	1/1:2,14:16:39.13:562,39,0	1/1:4,22:26:51.17:735,51,0	1/1:4,34:38:99:1449,102,0	1/1:0,28:28:78.26:1123,78,0	1/1:1,10:10:30.10:431,30,0	1/1:0,9:9:24.08:345,24,0	1/1:2,30:32:81.27:1166,81,0	1/1:0,34:34:96.32:1382,96,0	1/1:2,27:29:78.26:1123,78,0	1/1:0,37:37:99:1556,108,0	1/1:1,26:27:75.25:1080,75,0	1/1:2,42:44:99:1598,111,0	1/1:1,21:22:53.58:815,54,0	1/1:3,14:16:42.11:576,42,0	1/1:0,20:20:54.18:778,54,0	1/1:1,35:36:96.32:1383,96,0	1/1:2,14:16:39.13:561,39,0	1/1:0,14:14:36.12:518,36,0	1/1:1,26:27:66.22:950,66,0	0/0:12,0:12:36.10:0,36,435	1/1:0,23:23:69.23:982,69,0	1/1:4,20:24:57.19:819,57,0	1/1:0,9:9:27.09:389,27,0
chr10	12973138	.	GT	G	6070.23	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-0.304;DP=396;FS=98.465;HRun=1;HaplotypeScore=48.2476;InbreedingCoeff=0.8302;MQ=82.77;MQ0=1;MQRankSum=-2.337;QD=19.90;ReadPosRankSum=0.749;VQSLOD=0.9387;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,102,1309	1/1:2,4:5:15.04:186,15,0	0/0:23,0:21:39.71:0,40,661	0/0:17,1:17:31.90:0,32,407	1/1:0,10:10:12:145,12,0	1/1:8,0:8:1.88:63,2,0	1/1:9,0:9:11.32:118,11,0	1/1:9,8:17:38.98:438,39,0	1/1:2,14:16:20.92:243,21,0	1/1:3,5:8:18.05:237,18,0	1/1:0,5:5:5.48:82,5,0	1/1:0,20:20:27.09:375,27,0	1/1:7,8:15:39.11:470,39,0	1/1:0,10:10:9.03:125,9,0	1/1:2,13:15:15.26:180,15,0	1/1:1,12:13:27:351,27,0	1/1:1,21:22:32.94:413,33,0	1/1:0,21:21:33.11:448,33,0	1/1:3,12:15:43.64:364,44,0	1/1:0,7:7:14.17:149,14,0	1/1:0,19:19:21.07:292,21,0	1/1:0,9:9:5.49:82,5,0	1/1:1,10:11:14.88:206,15,0	1/1:0,19:19:33.11:458,33,0	0/0:16,0:16:48.09:0,48,584	1/1:0,9:9:17.47:149,17,0	1/1:0,16:16:23.98:332,24,0	1/1:0,5:5:12.04:164,12,0
chr10	12973480	.	A	AC	17937.40	PASS	AB=0.969;AC=49;AF=0.875;AN=56;BaseQRankSum=-10.555;DP=705;FS=6.875;HRun=6;HaplotypeScore=72.2227;InbreedingCoeff=0.8338;MQ=85.78;MQ0=0;MQRankSum=-5.451;QD=28.38;ReadPosRankSum=2.822;VQSLOD=5.5981;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:87.19:0,87,886	1/1:1,11:12:33.11:415,33,0	0/0:21,0:21:43.07:0,43,390	0/1:30,0:30:14.74:15,0,330	1/1:2,20:22:54.17:674,54,0	1/1:2,21:23:60.19:750,60,0	1/1:2,22:24:63.20:793,63,0	1/1:6,18:24:48.12:585,48,0	1/1:1,28:29:63.20:792,63,0	1/1:5,19:24:63.20:782,63,0	1/1:1,11:12:27.09:340,27,0	1/1:5,34:39:81.25:1006,81,0	1/1:2,23:25:51:641,51,0	1/1:5,30:35:84.27:1054,84,0	1/1:3,31:34:75.07:943,75,0	1/1:2,25:27:54.17:679,54,0	1/1:4,37:41:99:1316,105,0	1/1:1,30:31:81.26:1016,81,0	1/1:5,22:27:69.20:846,69,0	1/1:0,13:13:36.11:449,36,0	1/1:5,34:39:84.10:1033,84,0	1/1:0,13:13:36.12:453,36,0	1/1:3,15:18:33.11:415,33,0	1/1:2,28:30:75.22:929,75,0	0/0:13,0:13:39.09:0,39,397	1/1:1,30:31:90.26:1105,90,0	1/1:1,21:22:60.19:755,60,0	1/1:0,6:6:12.04:151,12,0
chr10	12974002	.	T	TG	15029.76	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-12.834;DP=707;FS=1.822;HRun=6;HaplotypeScore=63.9145;InbreedingCoeff=0.9993;MQ=83.31;MQ0=0;MQRankSum=-3.033;QD=30.80;ReadPosRankSum=6.345;VQSLOD=4.7305;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,144,1450	1/1:0,8:8:21.07:264,21,0	0/0:24,0:24:57.11:0,57,579	0/0:17,0:17:34.31:0,34,334	1/1:2,20:22:57.18:706,57,0	1/1:3,34:37:93.28:1155,93,0	1/1:3,16:19:48.15:604,48,0	0/0:32,0:32:78.17:0,78,791	1/1:2,16:18:42.13:526,42,0	1/1:9,21:30:57.16:700,57,0	1/1:6,21:27:63.20:790,63,0	1/1:1,25:26:69.22:868,69,0	1/1:1,22:23:60.19:755,60,0	1/1:2,21:23:60.19:755,60,0	1/1:7,31:38:87.28:1094,87,0	1/1:1,25:26:60.19:755,60,0	1/1:4,32:36:87.28:1094,87,0	1/1:1,25:26:72.23:906,72,0	0/0:21,0:21:54.06:0,54,530	0/0:20,0:20:48.10:0,48,488	0/0:39,0:39:99:0,102,1028	1/1:3,18:21:51.16:642,51,0	1/1:3,21:24:63.19:776,63,0	1/1:2,22:24:60.19:755,60,0	0/0:14,0:14:37.30:0,37,357	1/1:1,18:19:54.17:679,54,0	1/1:3,22:24:57.18:717,57,0	1/1:2,14:16:39.12:491,39,0
chr10	12974333	.	A	AAC	32420.57	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-11.317;DP=798;FS=1.293;HRun=0;HaplotypeScore=84.9512;InbreedingCoeff=0.9913;MQ=82.98;MQ0=2;MQRankSum=-6.377;QD=47.40;ReadPosRankSum=3.471;VQSLOD=6.1361;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,117,1674	1/1:0,10:10:30.10:530,30,0	0/0:23,0:23:60.19:0,60,833	0/0:25,0:25:57.66:0,58,798	1/1:4,11:16:39.13:687,39,0	1/1:1,26:27:69.24:1265,69,0	1/1:2,31:33:78.27:1430,78,0	1/1:2,33:36:99:1803,102,0	1/1:1,24:25:72.25:1320,72,0	1/1:4,23:27:72.25:1307,72,0	1/1:1,19:22:60.21:1093,60,0	1/1:1,32:33:90.31:1650,90,0	1/1:3,20:23:57.20:1045,57,0	1/1:2,29:31:81.28:1485,81,0	1/1:3,37:40:99:1923,105,0	1/1:3,43:47:99:2087,114,0	1/1:1,43:43:99:2144,117,0	1/1:2,22:24:60.21:1100,60,0	1/1:5,10:15:39.12:651,39,0	1/1:1,19:20:57.20:1045,57,0	1/1:1,44:46:99:2310,126,0	1/1:1,21:22:63.22:1151,63,0	1/1:4,20:24:54.18:973,54,0	1/1:2,44:45:99:2144,117,0	0/0:21,0:21:60.20:0,60,859	1/1:1,31:33:99:1804,99,0	1/1:1,32:33:69.24:1252,69,0	1/1:0,7:7:12.04:220,12,0
chr10	12976027	.	C	CCG	1461.83	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=2.090;DP=531;FS=3.472;HRun=0;HaplotypeScore=93.8637;InbreedingCoeff=0.8544;MQ=72.00;MQ0=0;MQRankSum=2.958;QD=16.43;ReadPosRankSum=-6.206;VQSLOD=1.7945;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:71.99:0,72,972	0/0:11,0:11:20.93:0,21,247	0/0:7,0:8:10.80:0,11,141	0/1:11,0:9:15.95:16,0,18	0/0:18,0:18:17.67:0,18,383	0/0:5,0:15:22.34:0,22,148	0/0:6,0:22:16.98:0,17,212	1/1:4,11:18:43.16:501,43,0	0/0:25,0:25:59.98:0,60,769	0/0:15,0:15:38.10:0,38,522	0/0:12,0:12:21:0,21,299	0/0:31,0:31:49.45:0,49,928	0/0:22,0:22:51.09:0,51,734	0/0:23,0:23:44.74:0,45,657	0/0:18,0:19:44.33:0,44,643	0/0:12,0:14:36.03:0,36,498	0/0:22,0:22:63.15:0,63,974	0/0:21,0:23:53.10:0,53,744	1/1:1,11:15:38.90:451,39,0	1/1:4,8:14:23.80:230,24,0	1/1:4,19:31:23.92:428,24,0	0/0:17,0:17:39:0,39,583	0/0:11,0:12:20.99:0,21,283	0/0:27,0:27:75.10:0,75,1091	0/0:21,0:22:41.87:0,42,508	0/0:14,0:14:35.96:0,36,439	0/0:15,0:15:42:0,42,577	0/0:19,0:20:44.97:0,45,600
chr10	12978090	.	A	ACCACC	42948.97	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=8.088;DP=737;FS=7.860;HRun=0;HaplotypeScore=180.7815;InbreedingCoeff=0.9916;MQ=73.65;MQ0=0;MQRankSum=-15.794;QD=68.61;ReadPosRankSum=1.627;VQSLOD=5.9215;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,102,2198	1/1:2,3:5:15.02:329,15,0	0/0:30,0:30:84.27:0,84,1727	0/0:29,0:29:84.22:0,84,1607	1/1:2,15:20:21.03:527,21,0	1/1:3,15:18:48.16:1315,48,0	1/1:9,18:28:69.23:1749,69,0	1/1:16,16:34:90.29:2552,90,0	1/1:8,29:41:99:3149,102,0	1/1:10,20:32:81.25:2328,81,0	1/1:4,14:20:33.11:980,33,0	1/1:6,28:37:96.33:2810,96,0	1/1:4,18:25:63.22:1883,63,0	1/1:6,23:32:75.26:2200,75,0	1/1:4,17:21:57.20:1688,57,0	1/1:2,36:39:99:3157,102,0	1/1:11,16:29:72.25:2143,72,0	1/1:8,12:21:54.16:1611,54,0	1/1:14,11:30:81.23:2267,81,0	1/1:2,10:14:30.10:943,30,0	1/1:10,13:26:25.84:566,26,0	1/1:3,20:25:54.18:1455,54,0	1/1:4,13:17:21.07:626,21,0	1/1:6,20:29:60.16:1739,60,0	0/0:18,0:18:48.14:0,48,1000	1/1:6,34:40:99:3571,114,0	1/1:1,30:35:93.17:2733,93,0	1/1:0,7:7:21.07:629,21,0
chr10	12980081	.	T	TTC	2192.08	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-6.705;DP=558;FS=0.000;HRun=0;HaplotypeScore=110.4637;InbreedingCoeff=0.9808;MQ=69.94;MQ0=4;MQRankSum=-1.080;QD=28.47;ReadPosRankSum=-1.389;VQSLOD=4.7354;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,102,1316	0/0:5,0:5:15.03:0,15,207	0/0:35,0:16:16.01:0,16,243	0/0:38,0:13:13.85:0,14,215	0/0:15,0:15:38.99:0,39,495	0/0:24,0:24:66.16:0,66,875	0/0:13,0:13:36.09:0,36,504	1/1:10,18:28:57.74:773,58,0	0/0:13,0:13:36.04:0,36,483	0/0:10,0:10:30.09:0,30,398	0/0:9,0:9:24.07:0,24,330	0/0:27,0:27:75.10:0,75,988	0/0:14,0:14:42.13:0,42,604	0/0:13,0:13:33:0,33,391	0/0:20,0:20:57.16:0,57,785	0/0:28,0:28:69.19:0,69,961	0/0:26,0:26:75.19:0,75,1073	0/0:33,0:33:78.09:0,78,1055	1/1:4,14:19:42.75:598,43,0	1/1:2,13:14:38.95:548,39,0	1/1:2,13:15:29.97:433,30,0	0/0:6,0:5:15.05:0,15,228	0/0:12,0:12:33.98:0,34,483	0/0:34,0:34:96.26:0,96,1341	0/0:14,0:14:33.10:0,33,464	0/0:11,0:11:33.02:0,33,428	0/0:24,0:24:65.42:0,65,738	0/0:15,0:15:45.07:0,45,580
chr10	12980750	.	CCTT	C	1356.71	PASS	AB=0.977;AC=38;AF=0.731;AN=52;BaseQRankSum=-4.398;DP=382;FS=13.389;HRun=0;HaplotypeScore=41.6803;InbreedingCoeff=-0.0379;MQ=32.91;MQ0=140;MQRankSum=0.764;QD=3.94;ReadPosRankSum=0.946;VQSLOD=0.1295;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:14:13.65:0,14,146	0/1:7,0:6:14.88:39,0,15	./.	./.	0/1:12,5:11:9.38:26,0,9	1/1:18,0:9:13.48:91,13,0	1/1:18,0:4:3.10:8,3,0	1/1:9,0:4:6.22:15,6,0	0/1:8,0:6:3.56:44,0,4	1/1:19,0:11:22.55:117,23,0	1/1:10,0:7:0.74:5,1,0	1/1:11,0:5:4.52:53,5,0	1/1:7,0:6:6.96:69,7,0	0/1:12,0:8:7.08:20,0,7	0/1:16,0:8:36.96:37,0,40	1/1:17,0:8:16.93:118,17,0	1/1:19,0:16:17.78:168,18,0	1/1:12,0:3:5.96:45,6,0	0/1:17,0:7:10.41:75,0,10	1/1:11,0:6:9.16:79,9,0	1/1:22,0:5:11.99:103,12,0	0/1:13,0:10:6.37:43,0,6	0/1:16,0:8:17.41:23,0,17	1/1:33,0:16:25.22:275,25,0	0/0:11,0:9:3.22:0,3,78	0/1:15,0:6:4.01:14,0,4	0/1:7,0:5:12.64:26,0,13	1/1:10,0:5:2.37:8,2,0
chr10	12980798	.	CCTT	C	1365.23	PASS	AB=0.645;AC=33;AF=0.611;AN=54;BaseQRankSum=-2.837;DP=324;FS=32.192;HRun=0;HaplotypeScore=37.6784;InbreedingCoeff=0.6553;MQ=42.50;MQ0=77;MQRankSum=1.306;QD=6.93;ReadPosRankSum=0.992;VQSLOD=1.0762;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:13:26.89:0,27,275	1/1:4,0:4:2.37:8,2,0	0/0:15,0:1:3.01:0,3,31	0/0:9,0:1:3.01:0,3,31	1/1:6,0:5:8.98:73,9,0	0/0:4,0:2:6.01:0,6,75	0/0:14,0:9:23.95:0,24,208	0/0:15,0:9:17.99:0,18,162	1/1:2,7:8:3.01:44,3,0	1/1:7,0:6:17.96:159,18,0	1/1:7,0:6:17.99:153,18,0	1/1:2,5:6:2.96:19,3,0	1/1:1,4:5:3.01:44,3,0	./.	1/1:6,15:19:0.26:39,0,0	1/1:6,8:8:2.80:43,3,0	1/1:2,15:15:9.03:131,9,0	1/1:10,0:7:17.27:169,17,0	0/0:8,0:5:9.01:0,9,83	0/0:10,0:8:20.96:0,21,177	0/0:22,0:16:41.97:0,42,384	1/1:9,0:6:3:27,3,0	0/1:9,11:13:0.26:0,0,0	1/1:26,0:15:26.78:210,27,0	0/0:4,0:3:9.01:0,9,114	1/1:6,14:14:32.85:272,33,0	1/1:4,0:3:5.95:61,6,0	1/1:10,1:6:9.01:95,9,0
chr10	12980992	.	T	TC	14281.21	PASS	AB=0.961;AC=54;AF=0.964;AN=56;BaseQRankSum=-2.789;DP=598;FS=1.703;HRun=2;HaplotypeScore=179.6940;InbreedingCoeff=-0.0238;MQ=56.26;MQ0=16;MQRankSum=-0.372;QD=23.88;ReadPosRankSum=5.838;VQSLOD=4.5661;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,21:25:59.77:834,60,0	1/1:0,3:3:6.01:86,6,0	0/1:66,2:17:16.87:17,0,246	0/1:100,3:36:75.22:75,0,385	1/1:5,17:22:42.11:585,42,0	1/1:4,13:15:45.15:644,45,0	1/1:6,9:15:35.88:461,36,0	1/1:5,20:23:63.21:895,63,0	1/1:2,13:15:42.14:601,42,0	1/1:4,13:17:48.14:650,48,0	1/1:3,14:17:40.19:564,40,0	1/1:6,21:27:72.24:1014,72,0	1/1:1,17:18:54.18:745,54,0	1/1:1,15:16:48.12:660,48,0	1/1:4,14:18:48.05:685,48,0	1/1:6,10:16:36.12:511,36,0	1/1:2,19:21:48.15:677,48,0	1/1:1,11:12:33.11:473,33,0	1/1:1,10:10:27.09:368,27,0	1/1:2,9:11:18.04:249,18,0	1/1:4,15:19:37.36:515,37,0	1/1:4,6:10:18.06:257,18,0	1/1:4,7:11:20.99:271,21,0	1/1:8,14:21:36.47:507,36,0	1/1:2,6:8:21.03:277,21,0	1/1:1,10:11:30.03:431,30,0	1/1:6,13:19:45.04:625,45,0	1/1:1,14:15:42.14:602,42,0
chr10	12980994	.	CT	C	1693.57	PASS	AB=1.000;AC=48;AF=0.857;AN=56;BaseQRankSum=4.271;DP=605;FS=1.161;HRun=1;HaplotypeScore=223.8553;InbreedingCoeff=0.2855;MQ=55.12;MQ0=17;MQRankSum=-3.296;QD=3.97;ReadPosRankSum=8.046;VQSLOD=-0.1494;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:26:11.67:78,12,0	1/1:3,0:3:1.03:4,1,0	0/0:70,1:16:13.11:0,13,384	0/0:106,1:35:16.09:0,16,461	1/1:22,0:22:24.79:79,25,0	1/1:19,0:17:27.80:101,28,0	0/1:15,0:15:39.25:39,0,66	1/1:23,2:23:18.88:126,19,0	1/1:16,0:16:5.11:60,5,0	0/1:18,0:18:34.82:81,0,35	1/1:18,1:19:28.49:135,28,0	1/1:25,0:25:30.69:109,31,0	1/1:17,0:18:31.56:101,32,0	1/1:16,0:16:15.86:94,16,0	1/1:17,0:17:16.03:102,16,0	0/1:16,0:16:20.47:40,0,20	1/1:22,0:22:28.78:95,29,0	1/1:12,0:12:16.69:60,17,0	1/1:12,0:11:11.91:46,12,0	1/1:11,0:11:11.15:32,11,0	1/1:18,0:18:12.84:90,13,0	1/1:11,0:11:12.92:48,13,0	1/1:10,0:10:7.63:73,8,0	1/1:20,2:21:14.45:99,14,0	1/1:8,0:8:1.83:18,2,0	1/1:12,0:12:2.42:19,2,0	0/1:17,0:17:23.86:61,0,24	1/1:15,0:15:18.70:53,19,0
chr10	12980996	.	CTT	C	3900.64	PASS	AB=0.990;AC=53;AF=0.946;AN=56;BaseQRankSum=0.678;DP=611;FS=1.780;HRun=3;HaplotypeScore=226.0366;InbreedingCoeff=0.5773;MQ=54.27;MQ0=18;MQRankSum=0.996;QD=7.24;ReadPosRankSum=3.283;VQSLOD=0.3284;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:26:51.20:307,51,0	1/1:3,0:3:6.05:26,6,0	0/0:71,0:15:8.19:0,8,249	0/1:103,0:33:6.59:7,0,249	1/1:22,0:22:28.05:115,28,0	1/1:18,2:19:36.27:181,36,0	1/1:15,0:15:32.47:208,32,0	1/1:26,0:24:48.85:286,49,0	1/1:17,0:17:34.77:186,35,0	1/1:18,0:18:13.66:163,14,0	1/1:18,1:19:15.63:153,16,0	1/1:24,1:25:43.82:245,44,0	1/1:19,0:19:36.67:187,37,0	1/1:16,0:16:23.06:81,23,0	1/1:19,0:19:36.87:208,37,0	1/1:16,0:16:34.88:185,35,0	1/1:21,1:22:35.62:158,36,0	1/1:11,1:12:23:124,23,0	1/1:12,0:11:15.91:84,16,0	1/1:12,0:12:22.99:116,23,0	1/1:19,0:19:20.52:90,21,0	1/1:11,0:11:13.44:50,13,0	1/1:9,0:9:15.07:83,15,0	1/1:23,0:22:25.28:124,25,0	1/1:9,0:9:16.78:110,17,0	1/1:12,0:12:22.74:118,23,0	1/1:16,0:16:35.82:245,36,0	1/1:15,0:15:22.03:59,22,0
chr10	12980998	.	T	TC	16870.77	PASS	AB=0.963;AC=54;AF=0.964;AN=56;BaseQRankSum=-3.121;DP=610;FS=0.000;HRun=0;HaplotypeScore=176.9281;InbreedingCoeff=-0.0395;MQ=52.18;MQ0=18;MQRankSum=-1.249;QD=27.66;ReadPosRankSum=3.686;VQSLOD=4.4948;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,25:28:71.65:1050,72,0	1/1:0,3:3:8.96:114,9,0	0/1:68,2:15:45.99:46,0,261	0/1:96,3:30:99:114,0,235	1/1:2,21:23:50.83:668,51,0	1/1:6,14:20:59.92:768,60,0	1/1:4,13:17:51.14:771,51,0	1/1:3,21:22:60.20:931,60,0	1/1:1,16:17:51.11:779,51,0	1/1:3,13:17:51.15:733,51,0	1/1:4,16:20:50.55:635,51,0	1/1:2,22:24:68.83:1045,69,0	1/1:1,18:19:57.14:851,57,0	1/1:1,13:15:45.13:678,45,0	1/1:2,16:18:54.16:831,54,0	1/1:4,14:18:51.16:767,51,0	1/1:2,19:21:54.10:788,54,0	1/1:1,11:12:33.10:501,33,0	1/1:3,11:13:27.09:409,27,0	1/1:1,10:11:32.80:372,33,0	1/1:4,16:20:42.54:519,43,0	1/1:2,9:11:23.93:320,24,0	1/1:2,7:9:23.91:304,24,0	1/1:9,16:24:44.39:579,44,0	1/1:2,7:9:24.07:357,24,0	1/1:0,11:11:33.11:515,33,0	1/1:0,16:16:48.16:758,48,0	1/1:0,14:14:42.14:668,42,0
chr10	12981017	.	T	TC	17658.72	PASS	AB=0.936;AC=54;AF=0.964;AN=56;BaseQRankSum=-4.788;DP=598;FS=4.799;HRun=2;HaplotypeScore=166.7811;InbreedingCoeff=-0.0389;MQ=60.39;MQ0=12;MQRankSum=-2.269;QD=29.53;ReadPosRankSum=4.385;VQSLOD=4.4543;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,29:28:75.21:1095,75,0	1/1:0,5:5:12.04:175,12,0	0/1:47,4:19:79.87:80,0,167	0/1:76,5:26:99:155,0,161	1/1:0,21:21:42.14:627,42,0	1/1:5,16:20:48.16:713,48,0	1/1:0,20:20:54.18:798,54,0	1/1:4,23:27:75.19:1073,75,0	1/1:0,17:17:51.17:763,51,0	1/1:2,21:23:66.19:954,66,0	1/1:0,17:17:45.15:668,45,0	1/1:2,22:24:63.21:929,63,0	1/1:1,17:18:51.17:757,51,0	1/1:0,20:21:57.19:845,57,0	1/1:0,20:20:57.19:848,57,0	1/1:0,21:21:63.21:938,63,0	1/1:2,24:26:66.18:944,66,0	1/1:1,11:12:16.78:423,17,0	1/1:3,8:11:26.98:375,27,0	1/1:1,10:11:30.06:423,30,0	1/1:7,11:18:29.91:424,30,0	1/1:0,11:11:30.10:444,30,0	1/1:1,11:12:26.74:401,27,0	1/1:1,25:25:42.09:628,42,0	1/1:0,13:13:39.13:581,39,0	1/1:1,11:12:36.12:539,36,0	1/1:2,18:20:54.14:783,54,0	1/1:3,4:7:21.04:276,21,0
chr10	12982805	.	CA	C	1118.65	PASS	AC=40;AF=0.833;AN=48;BaseQRankSum=-0.351;DP=150;FS=12.592;HRun=1;HaplotypeScore=41.1606;InbreedingCoeff=0.5730;MQ=73.91;MQ0=0;MQRankSum=-3.107;QD=9.99;ReadPosRankSum=-2.601;VQSLOD=-0.7329;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:25.73:0,26,242	1/1:1,0:1:3:26,3,0	0/0:8,0:8:15.28:0,15,191	0/0:5,0:5:6.48:0,6,94	./.	./.	1/1:6,0:6:13.51:108,14,0	1/1:7,0:7:9.46:76,9,0	1/1:3,0:3:4.24:28,4,0	1/1:6,0:6:11.96:99,12,0	./.	1/1:12,0:12:24.27:179,24,0	1/1:5,0:5:11.60:83,12,0	1/1:4,0:4:1.86:22,2,0	1/1:7,0:7:11.19:69,11,0	1/1:6,0:6:3.64:28,4,0	1/1:17,0:17:18.23:140,18,0	1/1:3,0:3:0.47:1,0,0	1/1:3,3:6:6.95:82,7,0	1/1:1,0:1:3:26,3,0	1/1:10,1:11:15.80:116,16,0	1/1:3,0:3:5.48:29,5,0	1/1:1,0:1:1.82:5,2,0	1/1:10,0:10:15.83:115,16,0	0/0:4,0:4:12.01:0,12,125	1/1:1,0:1:3:26,3,0	1/1:2,0:2:0.21:1,0,0	./.
chr10	12984392	.	CATAT	C	8118.01	PASS	AB=0.571;AC=47;AF=0.839;AN=56;BaseQRankSum=1.857;DP=294;FS=9.411;HRun=0;HaplotypeScore=55.7289;InbreedingCoeff=0.5769;MQ=73.15;MQ0=3;MQRankSum=-1.490;QD=32.47;ReadPosRankSum=2.636;VQSLOD=3.9323;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:7:15.05:0,15,342	1/1:1,3:4:6.02:102,6,0	0/0:9,0:6:1.19:0,1,24	0/0:20,0:14:1.42:0,1,8	1/1:0,14:14:27.09:461,27,0	1/1:1,13:14:33.11:563,33,0	1/1:1,3:4:6.02:102,6,0	1/1:13,15:27:48.13:762,48,0	1/1:0,5:5:9.03:154,9,0	1/1:0,8:8:21.06:329,21,0	1/1:3,14:17:33.11:563,33,0	1/1:2,6:8:12.04:205,12,0	1/1:0,4:4:12.04:205,12,0	1/1:1,5:6:12.04:204,12,0	1/1:5,6:11:15.05:256,15,0	1/1:3,13:16:33.11:563,33,0	1/1:2,12:14:30.10:512,30,0	1/1:0,6:6:9.03:154,9,0	1/1:5,10:13:24.97:494,25,0	1/1:3,11:14:27.09:461,27,0	1/1:0,1:1:3.01:51,3,0	1/1:0,2:2:6.02:102,6,0	1/1:3,5:8:9.03:153,9,0	0/1:1,3:4:7.66:45,0,8	0/0:7,0:7:18.06:0,18,448	1/1:3,13:16:39.13:656,39,0	1/1:3,3:6:9.03:153,9,0	1/1:3,22:25:51.17:869,51,0
chr10	12984478	.	CATAT	C	326.17	PASS	AB=0.875;AC=12;AF=0.500;AN=24;BaseQRankSum=1.890;DP=137;FS=1.871;HRun=0;HaplotypeScore=34.6377;InbreedingCoeff=0.3666;MQ=89.78;MQ0=8;MQRankSum=-0.270;QD=10.19;ReadPosRankSum=0.964;VQSLOD=2.1130;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:5:5.75:0,6,77	0/1:2,0:3:6.50:22,0,6	./.	./.	./.	./.	./.	0/0:17,0:17:3.48:0,3,46	0/0:1,0:2:3.01:0,3,52	./.	0/0:2,0:2:3.01:0,3,71	0/0:2,0:2:3.01:0,3,71	./.	./.	1/1:2,0:3:3:28,3,0	./.	1/1:6,2:9:15.01:180,15,0	1/1:0,3:3:6.02:95,6,0	./.	./.	./.	./.	./.	0/1:1,0:1:0:0,0,0	./.	./.	1/1:2,0:2:3:28,3,0	1/1:8,1:11:5.49:74,5,0
chr10	12984932	.	C	CA	4665.60	PASS	AB=0.783;AC=39;AF=0.696;AN=56;BaseQRankSum=-4.998;DP=537;FS=8.384;HRun=12;HaplotypeScore=66.9566;InbreedingCoeff=0.6646;MQ=77.62;MQ0=8;MQRankSum=-0.743;QD=12.09;ReadPosRankSum=2.754;VQSLOD=4.3364;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:25:64.64:0,65,464	1/1:0,6:6:14.89:132,15,0	0/1:53,0:30:1.17:1,0,88	0/0:35,0:23:3.95:0,4,97	1/1:3,8:11:5.07:200,5,0	1/1:2,11:13:26.67:234,27,0	1/1:5,9:14:24.04:233,24,0	0/0:36,0:36:92.23:0,92,660	1/1:4,11:15:24.04:234,24,0	1/1:5,12:16:30.03:286,30,0	1/1:1,8:9:23.91:211,24,0	1/1:6,11:19:5.01:196,5,0	1/1:6,17:23:2.14:156,2,0	1/1:4,12:15:18.03:175,18,0	1/1:6,9:17:6.57:162,7,0	1/1:1,16:19:35.73:320,36,0	1/1:6,21:27:19.49:450,19,0	0/1:8,16:24:4.75:282,0,5	0/0:22,0:21:53.65:0,54,390	0/0:11,0:11:23.86:0,24,175	0/0:19,0:18:18.88:0,19,223	1/1:4,5:9:11.92:97,12,0	1/1:3,7:9:21.03:204,21,0	1/1:4,31:35:44.16:581,44,0	0/0:3,0:3:2.98:0,3,22	1/1:6,11:18:10.97:250,11,0	1/1:3,12:14:17.90:161,18,0	0/1:10,5:15:6.84:102,0,7
chr10	12985187	.	AAAAAAC	A	2089.01	PASS	AB=1.000;AC=25;AF=0.481;AN=52;BaseQRankSum=4.988;DP=342;FS=2.745;HRun=0;HaplotypeScore=76.0213;InbreedingCoeff=-0.0128;MQ=53.66;MQ0=20;MQRankSum=1.664;QD=8.39;ReadPosRankSum=4.019;VQSLOD=1.4498;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:23:56.94:0,57,1108	1/1:3,0:2:2.18:6,2,0	0/0:19,0:5:14.92:0,15,186	0/0:17,0:7:14.06:0,14,197	0/1:13,0:11:16.86:66,0,17	0/1:16,0:16:13.65:88,0,14	0/1:6,0:5:1.46:1,0,10	1/1:10,20:28:56.65:684,57,0	0/1:11,0:11:5.11:20,0,5	1/1:15,0:14:26.24:138,26,0	0/1:6,0:6:17.17:17,0,26	0/1:5,0:5:16.51:43,0,17	0/1:9,0:8:10.35:10,0,27	0/0:7,0:7:8.87:0,9,70	0/1:10,0:10:64.91:67,0,65	1/1:9,0:9:7.44:39,7,0	0/1:19,0:16:18.03:85,0,18	0/1:21,0:18:73.31:78,0,73	1/1:4,14:17:22.85:524,23,0	1/1:10,1:10:14.82:177,15,0	0/0:7,0:7:1.72:0,2,4	./.	0/0:4,0:4:6.02:0,6,68	./.	0/0:11,0:10:27.05:0,27,503	0/1:21,0:20:52.42:169,0,52	0/1:9,0:8:6.75:7,0,43	0/1:17,0:11:19.51:34,0,20
chr10	12985188	.	AAAAAC	A	3205.36	PASS	AB=0.926;AC=34;AF=0.654;AN=52;BaseQRankSum=2.454;DP=339;FS=1.413;HRun=0;HaplotypeScore=67.1099;InbreedingCoeff=0.4737;MQ=54.06;MQ0=19;MQRankSum=-0.146;QD=13.08;ReadPosRankSum=3.267;VQSLOD=2.4933;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:23:47.98:0,48,867	1/1:2,0:1:2.98:21,3,0	0/0:20,0:6:17.91:0,18,184	0/0:17,0:7:13.38:0,13,156	1/1:11,2:11:12.32:150,12,0	1/1:14,2:16:23.67:223,24,0	1/1:5,0:4:2.84:21,3,0	1/1:29,1:28:56.88:572,57,0	1/1:12,0:12:14.77:110,15,0	1/1:14,0:13:32.62:245,33,0	0/1:5,0:5:22.47:31,0,22	1/1:5,0:5:10.14:99,10,0	1/1:9,0:8:5.78:60,6,0	0/0:7,0:7:2.21:0,2,17	0/1:8,2:10:7.86:181,0,8	1/1:8,1:9:8.84:92,9,0	1/1:17,3:17:27.95:279,28,0	0/1:17,3:17:22.70:227,0,23	1/1:18,0:17:38.83:417,39,0	1/1:5,6:10:14.92:170,15,0	0/0:1,6:7:0.47:0,0,2	./.	0/0:4,0:4:5.88:0,6,35	./.	0/0:11,0:10:26.94:0,27,397	1/1:18,3:20:39.07:310,39,0	0/1:9,0:8:7.49:49,0,7	1/1:15,1:11:5.02:122,5,0
chr10	12985189	.	AAAAC	A	4364.82	PASS	AB=0.646;AC=38;AF=0.731;AN=52;BaseQRankSum=-0.800;DP=331;FS=6.051;HRun=0;HaplotypeScore=58.5076;InbreedingCoeff=0.5799;MQ=54.61;MQ0=15;MQRankSum=-2.318;QD=17.89;ReadPosRankSum=2.168;VQSLOD=3.6799;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:23:47.94:0,48,700	1/1:1,1:1:3.01:45,3,0	0/0:20,0:6:17.91:0,18,169	0/0:17,0:7:13.06:0,13,117	1/1:12,0:10:17.95:158,18,0	1/1:5,11:16:24.08:337,24,0	1/1:1,4:4:3.01:45,3,0	1/1:28,0:26:57.02:531,57,0	1/1:2,10:12:15.52:223,16,0	1/1:2,12:13:32.86:386,33,0	0/1:2,3:5:18.38:55,0,18	1/1:4,1:5:11.94:120,12,0	1/1:4,5:8:6.49:89,6,0	1/1:6,1:7:2.96:20,3,0	1/1:7,3:10:21.01:238,21,0	1/1:1,8:9:8.71:123,9,0	1/1:9,11:17:30.01:386,30,0	0/1:10,10:17:8.39:297,0,8	1/1:17,0:16:39.01:377,39,0	1/1:11,0:10:14.98:139,15,0	0/0:7,0:7:0:0,0,0	./.	0/0:4,0:4:0:0,0,0	./.	0/0:11,0:10:20.87:0,21,289	1/1:9,12:20:41.98:430,42,0	1/1:4,5:8:9.03:133,9,0	1/1:8,4:11:18.03:233,18,0
chr10	12986494	.	C	CT	337.65	PASS	AC=28;AF=1.000;AN=28;DP=27;FS=0.000;HRun=1;HaplotypeScore=10.3176;InbreedingCoeff=-0.1238;MQ=86.56;MQ0=0;QD=14.07;VQSLOD=2.5084;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,1:1:2.96:19,3,0	./.	1/1:2,0:2:4.07:12,4,0	./.	1/1:0,1:1:2.96:19,3,0	1/1:2,0:2:5.99:48,6,0	1/1:0,2:2:5.92:39,6,0	./.	1/1:0,1:1:2.98:21,3,0	./.	1/1:2,0:2:3:26,3,0	1/1:1,1:2:2.96:19,3,0	./.	1/1:2,1:3:5.93:40,6,0	1/1:1,0:1:3:25,3,0	1/1:3,0:3:5.99:49,6,0	1/1:1,0:1:2.99:24,3,0	./.	./.	./.	1/1:1,1:2:5.97:45,6,0	./.	./.	./.	./.	1/1:1,0:1:2.99:24,3,0	./.	./.
chr10	12990177	.	T	TACACACAC	3533.34	PASS	AB=0.939;AC=37;AF=0.740;AN=50;BaseQRankSum=1.622;DP=522;FS=2.721;HRun=0;HaplotypeScore=145.1535;InbreedingCoeff=0.4139;MQ=52.41;MQ0=13;MQRankSum=-4.086;QD=8.95;ReadPosRankSum=-3.088;VQSLOD=1.9641;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:12.47:0,12,197	1/1:5,1:6:3.01:122,3,0	./.	./.	0/0:18,0:17:0:0,0,0	1/1:12,0:20:8.98:73,9,0	0/1:16,0:16:0:0,0,0	1/1:19,0:17:10.28:195,10,0	1/1:19,0:17:2.70:88,3,0	1/1:20,0:17:10.26:185,10,0	./.	1/1:25,0:22:9.02:195,9,0	1/1:23,1:23:14.97:366,15,0	1/1:15,1:15:5.62:93,6,0	1/1:17,4:24:6.02:185,6,0	1/1:17,3:19:12.04:404,12,0	1/1:21,0:21:12.04:361,12,0	1/1:12,2:14:12.14:271,12,0	1/1:18,0:9:3.01:61,3,0	0/1:11,3:14:10.12:116,0,10	0/1:19,0:17:0.10:0,0,0	0/1:11,0:11:0:0,0,0	0/0:13,0:16:0:0,0,0	0/1:33,0:32:1.22:222,0,1	0/0:16,0:18:21.06:0,21,446	1/1:14,0:14:11.16:99,11,0	1/1:26,0:25:14.77:353,15,0	1/1:7,0:6:5.99:144,6,0
chr10	12994274	.	GAAAA	G	12509.12	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=9.032;DP=638;FS=0.720;HRun=14;HaplotypeScore=222.5642;InbreedingCoeff=0.9963;MQ=76.96;MQ0=6;MQRankSum=-15.221;QD=33.01;ReadPosRankSum=4.659;VQSLOD=1.5575;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:35:81.28:0,81,1757	1/1:2,12:14:36.09:509,36,0	0/0:37,0:25:32.47:0,32,529	0/0:32,0:25:26.25:0,26,325	1/1:2,20:23:47.82:672,48,0	0/0:8,0:27:63.01:0,63,751	0/0:8,0:22:54.17:0,54,718	0/0:7,0:23:42.09:0,42,280	1/1:6,20:26:63.11:890,63,0	1/1:4,18:23:54.06:745,54,0	1/1:5,11:17:34.22:469,34,0	1/1:6,23:29:72.11:1018,72,0	1/1:3,13:16:22.32:532,22,0	1/1:7,21:28:72.17:1014,72,0	1/1:2,27:29:81.24:1146,81,0	1/1:5,23:28:69.10:976,69,0	1/1:5,17:22:51.07:699,51,0	1/1:5,14:19:32.93:467,33,0	0/0:7,0:24:43.24:0,43,291	0/0:2,0:10:23.40:0,23,135	0/0:2,0:24:47.08:0,47,303	1/1:5,17:22:51.09:721,51,0	1/1:2,10:12:27.02:381,27,0	1/1:6,16:22:36.99:548,37,0	0/0:21,0:24:63.21:0,63,1266	1/1:5,15:21:49.35:682,49,0	1/1:4,19:23:60.11:830,60,0	1/1:1,4:5:15.05:212,15,0
chr10	12994300	.	TAATGACGGCA	T	26008.11	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=15.857;DP=607;FS=0.000;HRun=0;HaplotypeScore=260.7956;InbreedingCoeff=0.9906;MQ=71.55;MQ0=1;MQRankSum=-17.381;QD=70.10;ReadPosRankSum=7.099;VQSLOD=3.9895;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:93.32:0,93,4917	1/1:3,9:12:24.04:720,24,0	0/0:25,0:23:49.20:0,49,2215	0/0:15,0:11:29.95:0,30,1006	1/1:4,19:23:42.14:1399,42,0	0/0:22,0:22:60.21:0,60,2984	0/0:28,0:28:84.29:0,84,4246	0/0:21,0:21:54.18:0,54,2589	1/1:7,18:26:51.18:1699,51,0	1/1:2,31:33:93.30:2905,93,0	1/1:3,9:12:27.09:890,27,0	1/1:5,25:30:75.26:2497,75,0	1/1:5,14:19:30.10:1000,30,0	1/1:5,16:21:42.14:1331,42,0	1/1:8,14:22:42.14:1337,42,0	1/1:4,23:27:63.22:2099,63,0	1/1:6,15:21:33.08:1022,33,0	1/1:2,14:16:36.08:1120,36,0	0/0:25,0:25:75.17:0,75,3030	0/0:12,0:12:36.11:0,36,1670	0/0:34,0:34:90.31:0,90,4712	1/1:5,19:24:42.14:1353,42,0	1/1:2,12:14:36.12:1154,36,0	1/1:3,14:17:39.13:1299,39,0	0/0:21,0:21:57.20:0,57,2980	1/1:1,24:25:72.24:2326,72,0	1/1:6,20:26:51.16:1558,51,0	1/1:0,3:3:9.03:300,9,0
chr10	12998963	.	GAGC	G	12207.58	PASS	AB=0.500;AC=45;AF=0.833;AN=54;BaseQRankSum=0.155;DP=557;FS=1.330;HRun=0;HaplotypeScore=90.1893;InbreedingCoeff=0.8392;MQ=68.75;MQ0=0;MQRankSum=-1.150;QD=25.75;ReadPosRankSum=5.981;VQSLOD=4.9077;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:27.09:0,27,540	1/1:2,6:8:12.04:175,12,0	0/0:17,0:15:7.50:0,7,364	0/0:24,0:21:35.92:0,36,662	1/1:4,5:9:6.49:88,6,0	1/1:1,11:12:23.99:302,24,0	1/1:9,24:33:60.20:873,60,0	1/1:8,13:21:39.10:529,39,0	1/1:5,18:23:51.09:694,51,0	1/1:8,11:19:27.05:352,27,0	1/1:0,3:3:3.01:44,3,0	1/1:3,13:16:32.81:456,33,0	1/1:3,8:11:24.08:349,24,0	1/1:2,14:16:36.12:524,36,0	1/1:0,9:9:24.04:325,24,0	1/1:3,13:17:39.10:545,39,0	1/1:8,37:45:90.06:1309,90,0	1/1:6,39:45:93.27:1353,93,0	1/1:4,13:17:42:500,42,0	0/1:0,2:2:0:0,0,0	1/1:25,58:83:99:1832,126,0	1/1:4,3:7:9.03:131,9,0	./.	1/1:13,31:44:66.22:960,66,0	0/0:18,0:18:33.11:0,33,625	1/1:9,10:19:30.10:433,30,0	1/1:2,8:10:18.06:262,18,0	1/1:0,5:5:12.04:175,12,0
chr10	13000714	.	T	TTTTG	1228.39	PASS	AB=0.618;AC=3;AF=0.054;AN=56;BaseQRankSum=-7.344;DP=627;FS=10.080;HRun=0;HaplotypeScore=104.6236;InbreedingCoeff=0.6102;MQ=64.63;MQ0=3;MQRankSum=1.094;QD=26.70;ReadPosRankSum=-2.221;VQSLOD=2.3936;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:68.80:0,69,1095	0/0:5,0:5:12.04:0,12,188	0/0:25,0:19:14.95:0,15,181	0/0:22,0:19:29.92:0,30,405	0/0:20,0:20:24.07:0,24,358	0/1:8,13:21:20.48:546,0,20	1/1:9,15:25:33.11:788,33,0	0/0:26,0:26:35.93:0,36,470	0/0:22,0:22:48.13:0,48,707	0/0:28,0:28:54.05:0,54,817	0/0:26,0:25:57.14:0,57,854	0/0:25,0:25:63.21:0,63,1000	0/0:8,0:8:12.02:0,12,167	0/0:13,0:13:30.10:0,30,476	0/0:29,0:29:57.17:0,57,860	0/0:27,0:27:39.12:0,39,597	0/0:39,0:39:72.22:0,72,1117	0/0:26,0:26:60.11:0,60,863	0/0:18,0:17:21.05:0,21,290	0/0:16,0:16:27.09:0,27,429	0/0:30,0:30:51.16:0,51,786	0/0:19,0:19:45.11:0,45,646	0/0:16,0:17:21.06:0,21,290	0/0:25,0:25:50.73:0,51,809	0/0:19,0:19:39.13:0,39,619	0/0:22,0:22:39.12:0,39,590	0/0:24,0:24:54.12:0,54,806	0/0:16,0:16:21.04:0,21,286
chr10	13003891	.	AG	A	651.61	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.882;DP=610;FS=6.430;HRun=6;HaplotypeScore=70.9393;InbreedingCoeff=0.9615;MQ=84.07;MQ0=0;MQRankSum=-2.109;QD=24.13;ReadPosRankSum=1.704;VQSLOD=3.5877;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,144,1858	0/0:5,0:4:9.03:0,9,118	0/0:28,0:28:15.81:0,16,739	0/0:23,0:22:62.49:0,62,756	0/0:15,0:15:39.13:0,39,512	0/0:28,0:28:78.22:0,78,982	0/0:25,0:25:75.20:0,75,942	0/0:30,0:30:75.24:0,75,971	0/0:18,0:18:54.18:0,54,710	0/0:15,0:15:45.15:0,45,591	0/0:16,0:15:36.12:0,36,466	0/0:25,0:25:66.21:0,66,866	0/0:23,0:23:60.20:0,60,789	0/0:16,0:16:45.15:0,45,590	0/0:24,0:24:63.19:0,63,800	0/0:22,0:22:60.18:0,60,774	0/0:32,0:32:84.26:0,84,1087	0/0:19,0:19:48.13:0,48,613	0/0:18,0:18:39.13:0,39,513	0/0:12,0:9:21.07:0,21,275	0/0:52,0:52:99:0,147,1915	0/0:14,0:12:33.11:0,33,433	1/1:1,10:10:27.07:289,27,0	1/1:1,15:16:45.11:484,45,0	0/0:19,0:17:48.16:0,48,631	0/0:21,0:20:60.19:0,60,785	0/0:17,0:16:51.15:0,51,646	0/0:15,0:15:39.11:0,39,496
chr10	13005180	.	TGAAAGTTAGTGTAAAAAAAAAAAAAAAAAAAA	T	22915.62	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=8.099;DP=455;FS=36.249;HRun=0;HaplotypeScore=354.0923;InbreedingCoeff=0.7206;MQ=82.69;MQ0=2;MQRankSum=-7.436;QD=65.10;ReadPosRankSum=4.718;VQSLOD=2.8314;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:24:51.17:0,51,4594	1/1:2,6:8:15.05:1150,15,0	0/0:30,0:22:10.13:0,10,737	0/0:21,0:16:19.72:0,20,567	1/1:7,11:18:27.05:1456,27,0	1/1:10,7:17:15.05:1175,15,0	1/1:9,5:14:9.02:669,9,0	1/1:14,0:14:2.95:27,3,0	1/1:12,10:22:21.07:1677,21,0	1/1:9,9:18:27.02:1641,27,0	1/1:10,2:12:3.01:240,3,0	1/1:10,7:17:12.03:959,12,0	1/1:9,7:16:15.05:1186,15,0	1/1:8,8:16:21.07:1576,21,0	1/1:8,14:22:27.09:2156,27,0	1/1:9,11:20:15.05:1198,15,0	1/1:7,5:12:9.01:583,9,0	1/1:9,5:14:3.46:240,3,0	1/1:5,6:11:18.01:1083,18,0	1/1:4,7:11:21.03:978,21,0	0/0:19,0:19:0.89:0,1,2	1/1:5,7:12:9.03:719,9,0	1/1:5,6:11:12.04:907,12,0	1/1:11,4:15:6.02:339,6,0	0/0:7,0:7:18.05:0,18,1106	1/1:13,6:19:14.99:850,15,0	1/1:20,9:29:21.01:1628,21,0	1/1:0,4:4:6.02:479,6,0
chr10	13005418	.	AGTGTGTGTGT	A	8855.57	PASS	AB=0.753;AC=36;AF=0.643;AN=56;BaseQRankSum=7.515;DP=653;FS=20.002;HRun=0;HaplotypeScore=204.7820;InbreedingCoeff=0.5798;MQ=60.34;MQ0=14;MQRankSum=-7.555;QD=20.40;ReadPosRankSum=3.106;VQSLOD=2.3847;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:36:60.16:0,60,2228	1/1:4,2:8:12.04:282,12,0	0/0:24,0:14:3.01:0,3,64	0/0:26,0:14:0:0,0,0	0/1:16,5:21:18.04:48,0,18	1/1:10,0:17:17.96:291,18,0	0/1:20,0:24:9.54:297,0,10	0/0:21,0:21:19.62:0,20,448	1/1:7,11:21:35.74:976,36,0	1/1:9,3:11:5.05:202,5,0	1/1:11,5:18:15.89:264,16,0	0/1:12,9:22:23.21:604,0,23	1/1:11,8:20:30.10:821,30,0	1/1:14,5:19:15.05:427,15,0	1/1:14,14:31:39.12:873,39,0	1/1:11,13:26:42.14:1149,42,0	1/1:27,8:36:17.73:422,18,0	1/1:10,5:15:12.04:304,12,0	0/0:19,0:22:27.06:0,27,854	0/0:15,0:14:15.05:0,15,611	0/0:41,0:56:48.16:0,48,1780	1/1:15,6:23:18.01:314,18,0	1/1:8,6:15:8.61:148,9,0	1/1:30,15:46:2.85:50,3,0	0/0:15,0:16:21.04:0,21,467	1/1:20,5:30:25.91:712,26,0	1/1:9,3:13:13.60:341,14,0	0/1:7,6:13:4.46:330,0,4
chr10	13008632	.	T	TA	371.46	PASS	AB=0.962;AC=6;AF=0.107;AN=56;BaseQRankSum=-2.097;DP=445;FS=4.667;HRun=12;HaplotypeScore=65.2953;InbreedingCoeff=0.6039;MQ=52.53;MQ0=5;MQRankSum=0.589;QD=9.06;ReadPosRankSum=1.850;VQSLOD=2.8477;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:65.44:0,65,478	0/0:6,0:6:11.92:0,12,88	0/1:3,0:1:0:0,0,0	0/0:1,0:1:1.55:0,2,4	0/0:25,0:24:47.70:0,48,349	1/1:2,12:13:30.05:292,30,0	1/1:5,7:11:4.95:188,5,0	0/0:38,0:33:68.47:0,68,502	0/0:7,0:7:14.89:0,15,108	0/0:24,0:24:32.70:0,33,239	0/0:25,0:25:38.40:0,38,278	0/0:7,0:7:8.90:0,9,66	0/1:11,1:12:5.34:5,0,128	0/0:9,0:9:20.83:0,21,153	0/0:12,0:12:20.85:0,21,153	0/0:19,0:19:38.71:0,39,283	0/0:29,0:29:40.77:0,41,291	0/0:27,1:27:15.46:0,15,274	0/0:22,0:23:51.64:0,52,355	0/0:15,0:15:26.77:0,27,197	0/0:12,0:12:29.82:0,30,219	0/0:5,0:5:11.93:0,12,88	0/0:5,0:5:5.94:0,6,44	0/0:5,0:5:5.86:0,6,44	0/0:18,0:18:38.72:0,39,283	0/0:19,0:19:44.68:0,45,328	0/0:20,0:20:23.40:0,23,172	0/0:10,0:8:14.89:0,15,109
chr10	13008692	.	CGGTT	C	14229.46	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=12.938;DP=501;FS=6.337;HRun=0;HaplotypeScore=93.9286;InbreedingCoeff=0.9560;MQ=56.00;MQ0=1;MQRankSum=-2.851;QD=45.90;ReadPosRankSum=5.537;VQSLOD=4.6522;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,108,3002	1/1:0,6:6:15.05:312,15,0	0/0:7,0:7:15.05:0,15,418	0/0:20,0:19:54.17:0,54,1358	1/1:0,14:14:26.84:566,27,0	1/1:1,15:16:30.09:591,30,0	1/1:1,6:6:3.01:63,3,0	0/0:28,0:28:84.25:0,84,2369	1/1:0,8:8:18.53:378,19,0	1/1:0,13:13:36.11:715,36,0	1/1:0,22:22:42.14:880,42,0	1/1:0,11:11:24.08:503,24,0	1/1:0,13:13:24.08:503,24,0	1/1:0,10:10:30.10:606,30,0	1/1:0,19:19:33.11:685,33,0	1/1:0,15:15:42.14:880,42,0	1/1:0,30:29:66.23:1385,66,0	1/1:1,32:32:72.25:1510,72,0	0/0:28,0:28:84.27:0,84,2189	0/0:25,0:25:72.25:0,72,2041	0/0:25,0:25:75.26:0,75,2181	1/1:0,8:8:15.03:315,15,0	1/1:0,10:10:15.04:314,15,0	1/1:0,7:7:15.05:314,15,0	0/0:19,0:19:57.16:0,57,1592	1/1:0,26:25:66.23:1383,66,0	1/1:0,17:17:48.16:1006,48,0	1/1:0,25:25:63.22:1321,63,0
chr10	13009802	.	CATG	C	1823.52	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.599;DP=796;FS=0.000;HRun=0;HaplotypeScore=107.9032;InbreedingCoeff=0.9978;MQ=85.86;MQ0=0;MQRankSum=-2.803;QD=37.21;ReadPosRankSum=0.495;VQSLOD=4.2622;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,135,2987	0/0:12,0:12:33.10:0,33,699	0/0:28,0:28:69.22:0,69,1412	0/0:26,0:26:54.60:0,55,1487	0/0:21,0:21:60.21:0,60,1337	1/1:2,19:21:48.16:799,48,0	1/1:2,26:28:69.24:1146,69,0	0/0:27,0:27:69.23:0,69,1494	0/0:28,0:28:81.26:0,81,1776	0/0:36,0:36:99:0,102,2292	0/0:15,0:15:45.14:0,45,969	0/0:41,0:41:99:0,117,2628	0/0:30,0:30:81.28:0,81,1797	0/0:33,0:33:93.32:0,93,2060	0/0:30,0:30:87.30:0,87,1954	0/0:29,0:29:81.26:0,81,1755	0/0:37,0:37:99:0,105,2307	0/0:43,0:43:99:0,120,2695	0/0:25,0:25:60.21:0,60,1304	0/0:16,0:16:42.14:0,42,944	0/0:49,0:49:99:0,144,3210	0/0:20,0:20:57.20:0,57,1280	0/0:20,0:20:57.20:0,57,1280	0/0:29,0:29:87.30:0,87,1935	0/0:27,0:27:75.21:0,75,1684	0/0:35,0:35:99:0,99,2178	0/0:35,0:35:99:0,105,2333	0/0:7,0:7:21.07:0,21,467
chr10	13011995	.	GC	G	2678.79	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=9.910;DP=640;FS=9.260;HRun=4;HaplotypeScore=62.4776;InbreedingCoeff=0.9989;MQ=69.77;MQ0=0;MQRankSum=0.344;QD=30.79;ReadPosRankSum=-0.103;VQSLOD=3.3363;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,123,1703	0/0:10,0:10:24.08:0,24,334	0/0:19,0:18:41.92:0,42,518	0/0:19,0:19:39.13:0,39,543	0/0:28,0:28:75.25:0,75,1049	0/0:19,0:19:54.18:0,54,755	0/0:24,0:24:66.20:0,66,890	1/1:2,14:16:42.10:477,42,0	0/0:24,0:24:69.23:0,69,964	0/0:29,0:29:75.25:0,75,1050	0/0:23,0:23:66.20:0,66,890	0/0:30,0:30:90.30:0,90,1260	0/0:23,0:23:66.18:0,66,876	0/0:17,0:17:51.17:0,51,714	0/0:22,0:22:66.21:0,66,907	0/0:27,0:27:81.27:0,81,1134	0/0:35,0:35:99:0,99,1376	0/0:27,0:27:78.26:0,78,1084	1/1:0,21:21:63.17:742,63,0	1/1:0,16:16:39.12:468,39,0	1/1:2,32:34:96.29:1152,96,0	0/0:23,0:23:63.20:0,63,865	0/0:10,0:10:27.05:0,27,355	0/0:26,0:26:72.20:0,72,986	0/0:20,0:20:60.16:0,60,803	0/0:32,0:32:93.29:0,93,1269	0/0:15,0:15:42.14:0,42,588	0/0:10,0:10:30.10:0,30,420
chr10	13012712	.	CTGTGTGTGTGTGTGTGTGTGTG	C	13165.23	PASS	AB=0.755;AC=32;AF=0.615;AN=52;BaseQRankSum=10.079;DP=563;FS=37.431;HRun=0;HaplotypeScore=276.2517;InbreedingCoeff=0.7098;MQ=60.84;MQ0=12;MQRankSum=-7.463;QD=40.89;ReadPosRankSum=3.472;VQSLOD=2.5505;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:33.06:0,33,2390	1/1:3,2:5:6.02:347,6,0	./.	0/0:34,0:22:9.03:0,9,209	1/1:22,10:34:24.08:1204,24,0	0/0:11,0:24:18.06:0,18,951	0/0:28,0:27:38.75:0,39,2537	0/0:16,0:16:10.59:0,11,431	1/1:8,8:16:6.02:347,6,0	1/1:14,10:24:18.02:529,18,0	1/1:10,6:17:6.02:347,6,0	1/1:11,3:15:12.04:674,12,0	1/1:4,8:12:15.05:867,15,0	1/1:3,5:8:6.02:347,6,0	1/1:9,14:23:27.09:1561,27,0	1/1:12,12:28:39.13:2135,39,0	0/1:15,13:28:41.15:845,0,41	0/1:15,4:19:99:164,0,103	0/0:9,0:8:8.06:0,8,566	0/0:11,0:11:12.04:0,12,1158	0/0:34,0:30:42.03:0,42,3570	1/1:8,6:14:6.02:347,6,0	1/1:14,10:24:12.04:664,12,0	./.	0/0:12,0:12:18.06:0,18,1463	1/1:9,10:19:18.01:360,18,0	1/1:12,12:24:18.06:1041,18,0	1/1:2,10:12:23.90:1387,24,0
chr10	13015649	.	CT	C	537.05	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.495;DP=523;FS=0.731;HRun=9;HaplotypeScore=52.7208;InbreedingCoeff=0.9883;MQ=64.14;MQ0=6;MQRankSum=1.359;QD=14.92;ReadPosRankSum=-0.270;VQSLOD=3.3699;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,102,1154	0/0:10,0:10:30.08:0,30,333	0/0:28,0:15:21.73:0,22,218	0/0:18,0:12:19.33:0,19,208	0/0:12,0:12:27.08:0,27,310	1/1:5,13:18:33:302,33,0	1/1:4,14:17:39.02:357,39,0	0/0:18,1:19:26.69:0,27,546	0/0:11,0:11:30.08:0,30,336	0/0:22,0:22:60.18:0,60,691	0/0:20,0:20:51.14:0,51,578	0/0:22,0:23:60.01:0,60,672	0/0:15,0:15:39.10:0,39,440	0/0:22,0:22:57.15:0,57,639	0/0:10,0:11:29.92:0,30,326	0/0:12,0:12:33.10:0,33,381	0/0:32,0:32:81.24:0,81,934	0/0:29,0:29:84.18:0,84,948	0/0:25,0:26:68.99:0,69,748	0/0:9,0:9:21.02:0,21,228	0/0:16,0:15:36.11:0,36,415	0/0:17,0:17:42.11:0,42,475	0/0:15,0:15:39.09:0,39,430	0/0:20,0:20:57.11:0,57,632	0/0:14,0:14:36.08:0,36,396	0/0:13,0:13:30.09:0,30,346	0/0:18,0:18:45.13:0,45,519	0/0:12,0:12:21.06:0,21,242
chr10	13015763	.	CTT	C	1538.86	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.301;DP=533;FS=0.652;HRun=2;HaplotypeScore=61.8933;InbreedingCoeff=0.9960;MQ=58.97;MQ0=4;MQRankSum=2.612;QD=37.53;ReadPosRankSum=0.326;VQSLOD=3.5222;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:87.30:0,87,1741	0/0:8,0:8:24.08:0,24,486	0/0:23,0:16:48.08:0,48,824	0/0:14,0:14:39.06:0,39,681	0/0:14,0:14:36.06:0,36,673	1/1:0,10:10:27.09:440,27,0	1/1:0,31:31:75.26:1221,75,0	0/0:29,0:29:84.22:0,84,1624	0/0:12,0:12:30.09:0,30,576	0/0:23,0:23:66.21:0,66,1265	0/0:9,0:9:27.09:0,27,549	0/0:25,0:25:75.26:0,75,1484	0/0:14,0:14:42.14:0,42,811	0/0:22,0:22:66.20:0,66,1268	0/0:15,0:15:45.13:0,45,833	0/0:11,0:11:33.11:0,33,671	0/0:34,0:34:98.37:0,98,1913	0/0:26,0:25:75.21:0,75,1446	0/0:24,0:21:60.18:0,60,1174	0/0:22,0:22:63.02:0,63,1090	0/0:22,0:22:63.21:0,63,1245	0/0:24,0:24:69.68:0,70,1299	0/0:11,0:11:33.10:0,33,633	0/0:27,0:27:75.26:0,75,1522	0/0:11,0:11:33.11:0,33,655	0/0:22,0:22:66.19:0,66,1236	0/0:13,0:13:39.13:0,39,792	0/0:8,0:8:24.08:0,24,483
chr10	13017359	.	G	GCA	3953.92	PASS	AB=0.813;AC=33;AF=0.635;AN=52;BaseQRankSum=-1.905;DP=579;FS=27.566;HRun=0;HaplotypeScore=94.5549;InbreedingCoeff=-0.2615;MQ=63.14;MQ0=19;MQRankSum=0.333;QD=7.75;ReadPosRankSum=1.825;VQSLOD=1.6736;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:21:23.51:0,24,179	1/1:4,6:10:9.03:133,9,0	./.	./.	0/1:11,6:17:32.79:33,0,41	0/1:14,8:23:69:155,0,69	1/1:20,2:35:18.01:176,18,0	1/1:28,0:26:5.90:37,6,0	1/1:15,4:19:2.28:188,2,0	0/1:19,6:25:20.42:135,0,20	0/1:15,1:16:2.53:80,0,3	1/1:17,12:29:4.27:126,4,0	0/1:15,1:17:1.15:122,0,1	1/1:16,2:18:0.92:122,1,0	0/1:18,2:19:24.20:135,0,24	0/1:15,4:19:29.27:196,0,29	0/1:20,4:24:2.61:385,0,3	0/1:11,8:19:11.32:307,0,11	1/1:10,0:9:2.99:24,3,0	0/1:8,0:8:7.47:60,0,7	1/1:48,0:44:34.25:304,34,0	0/1:16,6:22:7.50:121,0,8	0/1:6,6:13:21.95:119,0,22	0/1:23,9:32:61.74:436,0,62	0/0:15,0:15:15.48:0,15,152	1/1:17,12:29:11.89:330,12,0	0/1:12,0:11:16.48:114,0,16	0/1:7,5:13:38.90:115,0,39
chr10	13017530	.	G	GA	21866.72	PASS	AB=0.538;AC=47;AF=0.839;AN=56;BaseQRankSum=-11.452;DP=672;FS=0.396;HRun=1;HaplotypeScore=59.9398;InbreedingCoeff=0.8688;MQ=57.85;MQ0=1;MQRankSum=2.633;QD=39.61;ReadPosRankSum=3.373;VQSLOD=5.4227;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,135,1707	0/1:1,6:7:17.88:248,0,18	0/0:35,0:20:57.08:0,57,701	0/0:21,0:20:53.90:0,54,658	1/1:2,22:24:66.03:887,66,0	1/1:1,22:23:63.21:944,63,0	1/1:0,27:27:72.20:1053,72,0	1/1:6,30:33:93.28:1327,93,0	1/1:0,19:19:54.18:809,54,0	1/1:0,24:24:66.21:989,66,0	1/1:0,9:9:24.08:360,24,0	1/1:0,26:26:78.26:1169,78,0	1/1:0,18:18:48.16:718,48,0	1/1:1,27:28:72.24:1077,72,0	1/1:1,30:31:87.29:1304,87,0	1/1:0,23:23:66.22:989,66,0	1/1:0,25:25:72.24:1079,72,0	1/1:3,26:29:72.24:1078,72,0	1/1:1,13:12:27.09:402,27,0	1/1:0,16:16:48.04:645,48,0	1/1:4,29:33:69.23:1034,69,0	1/1:0,12:12:36.12:539,36,0	1/1:3,17:20:51.17:763,51,0	1/1:0,38:38:99:1574,105,0	0/0:18,0:18:54.18:0,54,701	1/1:0,22:22:66.22:989,66,0	1/1:3,28:31:78.26:1169,78,0	1/1:0,17:17:48.16:719,48,0
chr10	13018678	.	GCA	G	1267.86	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=2.849;DP=449;FS=6.935;HRun=0;HaplotypeScore=97.0407;InbreedingCoeff=0.7951;MQ=73.77;MQ0=8;MQRankSum=3.819;QD=16.68;ReadPosRankSum=-1.507;VQSLOD=3.1008;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:63.55:0,64,1244	0/0:4,0:4:11.99:0,12,157	0/0:21,0:16:39.13:0,39,643	0/0:25,0:18:3.13:0,3,543	0/0:6,0:6:6.02:0,6,91	0/0:15,0:15:36.85:0,37,454	0/0:30,0:30:67.88:0,68,904	1/1:16,0:16:42.14:594,42,0	0/1:8,0:7:3.48:3,0,158	0/0:22,0:22:63.21:0,63,1062	0/0:7,0:7:15.38:0,15,232	0/0:23,0:23:38.91:0,39,799	0/0:13,0:13:36.12:0,36,563	0/0:16,0:16:23.93:0,24,340	0/0:8,0:8:21.07:0,21,319	0/0:19,0:19:42.07:0,42,599	0/0:13,0:13:30.06:0,30,420	0/0:17,0:17:38.60:0,39,536	1/1:1,8:9:23.37:330,23,0	1/1:8,2:10:23.99:279,24,0	1/1:3,30:33:18.04:220,18,0	0/0:12,0:12:17.94:0,18,233	0/0:9,0:9:4.43:0,4,276	0/0:22,0:22:33.11:0,33,507	0/0:10,0:10:30.10:0,30,490	0/0:18,0:17:51.17:0,51,845	0/0:17,0:17:28.95:0,29,629	0/0:13,0:12:33.11:0,33,528
chr10	13018679	.	CACGTGT	C	1423.17	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=0.926;DP=446;FS=17.106;HRun=0;HaplotypeScore=124.1822;InbreedingCoeff=0.9061;MQ=72.88;MQ0=8;MQRankSum=2.111;QD=21.24;ReadPosRankSum=-0.189;VQSLOD=1.8351;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:84.14:0,84,1692	0/0:4,0:4:11.99:0,12,157	0/0:20,0:15:39.13:0,39,646	0/0:25,0:18:3.13:0,3,543	0/0:6,0:6:6.02:0,6,91	0/0:15,0:15:38.42:0,38,476	0/0:30,0:30:58.93:0,59,822	1/1:0,16:16:42.14:633,42,0	0/0:8,0:7:18.53:0,19,271	0/0:22,0:22:63.21:0,63,1341	0/0:7,0:7:15.33:0,15,299	0/0:23,0:23:57.65:0,58,1394	0/0:13,0:13:36.12:0,36,713	0/0:16,0:16:23.93:0,24,442	0/0:8,0:8:21.07:0,21,423	0/0:17,0:17:42.14:0,42,1011	0/0:13,0:13:30.06:0,30,669	0/0:17,0:17:38.57:0,39,639	1/1:9,0:9:23.37:367,23,0	1/1:8,0:10:23.99:310,24,0	1/1:30,0:32:18:271,18,0	0/0:12,0:12:18.52:0,19,256	0/0:9,0:9:24.01:0,24,396	0/0:22,0:22:33.11:0,33,634	0/0:10,0:10:30.10:0,30,724	0/0:18,0:17:51.17:0,51,1356	0/0:17,0:17:45.15:0,45,1118	0/0:13,0:12:33.11:0,33,778
chr10	13022283	.	GGT	G	809.91	PASS	AC=4;AF=0.077;AN=52;BaseQRankSum=-0.934;DP=521;FS=3.600;HRun=0;HaplotypeScore=80.6749;InbreedingCoeff=0.9650;MQ=35.95;MQ0=82;MQRankSum=1.911;QD=14.46;ReadPosRankSum=-0.148;VQSLOD=3.0306;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:23:60.16:0,60,1127	0/0:11,0:10:27.09:0,27,546	./.	./.	0/0:24,0:24:50.75:0,51,1031	1/1:1,23:19:36.12:587,36,0	1/1:7,25:13:21.07:342,21,0	0/0:21,0:14:39.10:0,39,720	0/0:11,0:11:33.11:0,33,669	0/0:13,0:12:33.07:0,33,610	0/0:18,0:17:36.12:0,36,701	0/0:17,0:16:45.15:0,45,883	0/0:15,0:15:36.08:0,36,664	0/0:27,0:27:69.23:0,69,1299	0/0:9,0:9:24.08:0,24,463	0/0:15,0:13:39.09:0,39,750	0/0:31,0:26:75.21:0,75,1435	0/0:26,0:19:51.17:0,51,988	0/0:16,0:12:33.11:0,33,668	0/0:18,0:16:36.12:0,36,730	0/0:37,0:26:72.25:0,72,1442	0/0:17,0:16:39.13:0,39,722	0/0:10,0:6:9.03:0,9,182	0/0:20,0:13:30.10:0,30,582	0/0:13,0:9:24.08:0,24,460	0/0:21,0:18:51.18:0,51,1027	0/0:26,0:24:69.21:0,69,1360	0/0:18,0:12:36.12:0,36,730
chr10	13022416	.	C	CAAA	1133.34	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-1.697;DP=343;FS=17.558;HRun=5;HaplotypeScore=68.2941;InbreedingCoeff=0.6572;MQ=62.81;MQ0=27;MQRankSum=2.053;QD=23.61;ReadPosRankSum=-3.147;VQSLOD=-0.5969;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:15:39.13:0,39,594	0/0:5,0:5:14.92:0,15,161	0/0:42,0:11:18.69:0,19,195	0/0:42,0:7:2.08:0,2,29	0/0:20,0:20:37.34:0,37,433	0/0:15,0:13:2.13:0,2,117	0/0:6,0:5:8.38:0,8,104	1/1:3,16:16:48.06:654,48,0	0/0:4,0:3:6.02:0,6,78	0/0:10,0:9:19.40:0,19,217	0/0:9,0:8:11.84:0,12,105	0/0:8,0:8:12.04:0,12,151	0/0:8,0:7:11.95:0,12,135	0/0:3,0:3:6.02:0,6,80	0/0:5,0:5:11.87:0,12,112	0/0:10,0:10:27.02:0,27,324	0/0:21,0:15:32.17:0,32,304	0/0:13,0:9:14.85:0,15,152	1/1:6,13:17:40.55:470,41,0	1/1:5,0:5:9.02:99,9,0	1/1:4,0:2:5.97:56,6,0	0/0:1,0:1:3.01:0,3,42	0/0:9,0:8:10.03:0,10,101	0/0:3,0:2:3.01:0,3,35	0/0:10,0:10:21.02:0,21,295	0/0:11,0:10:23.92:0,24,277	0/0:13,0:13:29.71:0,30,349	0/0:9,0:8:7.04:0,7,113
chr10	13022430	.	AC	A	2669.76	PASS	AB=0.976;AC=45;AF=0.804;AN=56;BaseQRankSum=1.889;DP=359;FS=37.964;HRun=1;HaplotypeScore=64.7843;InbreedingCoeff=0.5188;MQ=62.78;MQ0=20;MQRankSum=-5.101;QD=10.85;ReadPosRankSum=-2.859;VQSLOD=-0.7591;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:15:45.05:0,45,490	1/1:3,2:6:10.98:100,11,0	0/0:43,0:11:3.61:0,4,81	0/0:41,2:9:4.37:0,4,30	1/1:13,3:16:25.76:163,26,0	1/1:17,3:19:36.61:270,37,0	1/1:6,0:6:17.77:118,18,0	1/1:13,0:11:26.68:187,27,0	0/1:6,0:5:8.60:9,0,20	1/1:9,0:10:26.07:180,26,0	1/1:13,0:12:22.91:153,23,0	1/1:6,0:6:9.74:50,10,0	1/1:7,0:6:10.68:62,11,0	1/1:6,0:6:9.92:58,10,0	1/1:4,0:6:12.36:83,12,0	1/1:6,1:10:4.96:102,5,0	1/1:21,1:16:29.73:207,30,0	1/1:13,0:10:13.23:84,13,0	1/1:15,0:13:35.57:225,36,0	1/1:7,1:8:16.25:108,16,0	1/1:5,1:4:11.78:82,12,0	1/1:0,1:1:3.01:31,3,0	1/1:8,0:7:8.93:65,9,0	0/1:5,0:4:9.38:9,0,21	0/0:9,0:8:24.06:0,24,267	1/1:12,0:11:12.50:143,12,0	1/1:15,1:17:26.41:224,26,0	0/1:12,1:12:7.09:119,0,7
chr10	13022439	.	AC	A	2508.14	PASS	AB=0.913;AC=46;AF=0.821;AN=56;BaseQRankSum=3.382;DP=297;FS=13.408;HRun=1;HaplotypeScore=60.4488;InbreedingCoeff=0.4363;MQ=69.49;MQ0=14;MQRankSum=-3.988;QD=10.54;ReadPosRankSum=-4.382;VQSLOD=-0.7051;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:17:51.04:0,51,562	0/1:4,2:6:0.99:93,0,1	0/1:33,4:12:20.17:20,0,25	0/0:31,1:9:3.33:0,3,102	1/1:10,3:14:23.30:173,23,0	1/1:16,2:18:40.07:291,40,0	1/1:5,0:5:11.83:78,12,0	1/1:11,0:10:20.82:151,21,0	0/1:5,0:4:3.32:8,0,3	1/1:12,0:12:32.02:261,32,0	1/1:8,0:9:21.72:140,22,0	1/1:6,0:6:2.98:22,3,0	1/1:5,0:5:5.67:37,6,0	1/1:4,0:5:8.08:47,8,0	1/1:4,1:5:14.79:110,15,0	1/1:9,1:10:12.77:89,13,0	1/1:13,1:10:20.83:154,21,0	1/1:8,0:7:11.84:81,12,0	1/1:12,0:11:26.90:167,27,0	1/1:9,0:9:18.65:125,19,0	1/1:5,1:4:11.77:79,12,0	1/1:1,1:2:5.97:47,6,0	1/1:1,0:2:3:27,3,0	0/1:4,0:3:0.14:10,0,0	0/0:8,0:7:21.06:0,21,250	1/1:11,0:11:3.97:131,4,0	1/1:11,1:12:21.54:157,22,0	1/1:7,2:9:14.55:156,15,0
chr10	13022519	.	T	TAA	4014.91	PASS	AB=0.683;AC=43;AF=0.768;AN=56;BaseQRankSum=-2.108;DP=400;FS=7.763;HRun=15;HaplotypeScore=68.0668;InbreedingCoeff=0.2737;MQ=71.46;MQ0=4;MQRankSum=-0.082;QD=11.25;ReadPosRankSum=1.408;VQSLOD=2.2865;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:21:23.38:0,23,263	1/1:0,3:5:7.26:69,7,0	0/1:25,0:13:4.36:4,0,76	0/0:11,0:7:5.21:0,5,45	1/1:3,6:26:45.62:435,46,0	0/1:8,2:26:91.27:91,0,100	0/1:2,1:5:13:44,0,13	1/1:14,1:26:6.12:106,6,0	1/1:0,3:3:6.02:76,6,0	1/1:2,9:11:27.01:306,27,0	1/1:4,14:20:33.05:380,33,0	1/1:3,5:10:17.31:172,17,0	1/1:0,4:4:5.97:55,6,0	1/1:2,4:7:9:89,9,0	1/1:1,7:9:15.02:166,15,0	0/1:4,2:11:4.95:92,0,5	0/1:4,19:24:5.29:274,0,5	1/1:13,10:24:41.71:413,42,0	0/1:13,0:23:27.97:28,0,66	0/1:8,1:14:2.77:76,0,3	1/1:0,1:10:15.34:81,15,0	1/1:1,4:6:11.40:122,11,0	1/1:0,4:6:9.03:113,9,0	1/1:2,8:13:23.43:262,23,0	0/0:11,0:11:20.84:0,21,166	1/1:3,14:18:32.98:362,33,0	1/1:5,6:13:11.87:117,12,0	1/1:7,5:11:8.15:81,8,0
chr10	13022834	.	T	TTGTGCG	33278.72	PASS	AB=1.000;AC=46;AF=0.821;AN=56;BaseQRankSum=-4.582;DP=713;FS=0.402;HRun=0;HaplotypeScore=137.6718;InbreedingCoeff=0.7142;MQ=75.18;MQ0=0;MQRankSum=-13.549;QD=56.02;ReadPosRankSum=0.737;VQSLOD=5.0195;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:56:99:0,148,3261	1/1:6,5:12:11.85:407,12,0	0/0:25,0:25:54.16:0,54,1116	0/0:18,0:18:39.10:0,39,756	1/1:12,27:41:51.18:1708,51,0	1/1:4,11:17:30.10:1015,30,0	1/1:10,11:22:24.08:811,24,0	0/1:40,0:40:70.76:1625,0,71	1/1:8,17:25:60.21:1884,60,0	1/1:9,20:30:69.22:2186,69,0	1/1:4,18:25:39.13:1255,39,0	1/1:8,17:27:42.14:1425,42,0	1/1:5,25:31:75.26:2436,75,0	1/1:10,19:32:69.24:2293,69,0	1/1:6,17:26:51.18:1695,51,0	1/1:8,23:31:60.21:1974,60,0	1/1:4,23:29:51.17:1650,51,0	1/1:7,14:21:30.10:972,30,0	0/1:16,0:16:29.42:506,0,29	1/1:18,0:18:30.10:821,30,0	1/1:16,0:16:18.03:379,18,0	1/1:5,24:30:72.25:2288,72,0	1/1:7,13:21:45.15:1481,45,0	1/1:10,11:21:20.58:661,21,0	0/0:20,0:20:57.01:0,57,1181	1/1:9,16:27:54.16:1571,54,0	1/1:5,24:30:63.22:2141,63,0	1/1:1,1:5:3.01:94,3,0
chr10	13022839	.	C	CGTGTGT	32018.19	PASS	AB=1.000;AC=44;AF=0.786;AN=56;BaseQRankSum=4.898;DP=729;FS=3.796;HRun=0;HaplotypeScore=150.4705;InbreedingCoeff=0.5522;MQ=75.12;MQ0=0;MQRankSum=-16.306;QD=52.66;ReadPosRankSum=4.781;VQSLOD=4.9416;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,159,3445	0/1:11,0:11:32.12:317,0,32	0/0:25,0:25:60.16:0,60,1188	0/0:19,0:19:47.80:0,48,832	1/1:39,0:39:29.19:1426,29,0	1/1:17,0:17:9.12:827,9,0	1/1:22,0:22:3.09:660,3,0	1/1:13,26:51:99:3784,141,0	1/1:26,0:26:21.23:1517,21,0	1/1:29,0:29:51.18:1726,51,0	1/1:25,0:25:11.12:1033,11,0	0/1:25,0:25:1.83:1176,0,2	1/1:36,0:36:39.29:2043,39,0	1/1:31,0:31:28.27:1952,28,0	0/1:30,0:30:5.79:1357,0,6	1/1:30,0:30:19.24:1631,19,0	1/1:28,0:28:19.22:1488,19,0	0/1:20,0:20:2.87:766,0,3	1/1:6,8:21:57.17:1657,57,0	1/1:5,12:22:39.13:1198,39,0	1/1:7,9:21:21.07:559,21,0	1/1:29,0:29:72.25:1900,72,0	1/1:21,0:21:23.17:1204,23,0	1/1:22,0:22:2.62:615,3,0	0/0:22,0:22:60.17:0,60,1277	1/1:22,0:22:48.58:1293,49,0	1/1:26,0:25:63.22:1813,63,0	1/1:4,0:4:3.01:74,3,0
chr10	13023773	.	G	GT	7300.92	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=7.920;DP=587;FS=1.996;HRun=4;HaplotypeScore=107.2547;InbreedingCoeff=0.9670;MQ=67.21;MQ0=2;MQRankSum=-1.706;QD=16.75;ReadPosRankSum=0.465;VQSLOD=4.1224;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:98.96:0,99,1069	1/1:4,0:4:11.95:96,12,0	0/0:49,0:30:70.52:0,71,645	0/0:41,0:25:17.70:0,18,323	1/1:19,0:19:44.21:317,44,0	1/1:2,11:13:27.04:319,27,0	1/1:1,20:21:34.92:422,35,0	1/1:17,1:18:42.79:366,43,0	1/1:14,2:16:29.88:269,30,0	1/1:21,0:21:45.51:353,46,0	1/1:22,0:22:34.70:267,35,0	1/1:18,0:19:38.31:312,38,0	1/1:10,0:10:16.47:123,16,0	1/1:18,1:19:33:300,33,0	1/1:23,0:24:45.49:397,45,0	1/1:22,1:23:32.61:291,33,0	1/1:37,1:38:90.05:819,90,0	1/1:18,1:18:24.48:215,24,0	1/1:17,1:17:38.55:318,39,0	1/1:16,0:16:41.67:306,42,0	1/1:14,0:15:14.96:123,15,0	1/1:21,1:22:45.30:373,45,0	1/1:10,0:10:14.93:127,15,0	1/1:14,0:14:30.02:272,30,0	0/0:26,0:26:72.20:0,72,815	1/1:21,0:21:56.41:482,56,0	1/1:25,0:25:38.98:335,39,0	1/1:9,0:9:11.96:98,12,0
chr10	13023781	.	T	TTG	11976.74	PASS	AB=1.000;AC=47;AF=0.839;AN=56;BaseQRankSum=7.318;DP=591;FS=2.544;HRun=0;HaplotypeScore=113.1676;InbreedingCoeff=0.8351;MQ=68.35;MQ0=2;MQRankSum=-0.637;QD=27.04;ReadPosRankSum=1.785;VQSLOD=6.3280;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:87.99:0,88,1278	1/1:0,6:7:14.87:176,15,0	0/0:50,0:34:42.26:0,42,799	0/0:37,0:19:28.88:0,29,464	1/1:0,15:17:44.62:428,45,0	1/1:12,0:13:4.88:102,5,0	0/1:19,0:19:6.06:99,0,6	1/1:3,16:22:50.75:549,51,0	1/1:1,15:17:29.77:471,30,0	1/1:1,15:17:44.85:492,45,0	1/1:1,15:21:32.98:513,33,0	1/1:3,15:21:35.90:597,36,0	1/1:0,12:13:18.06:327,18,0	1/1:1,17:18:32.85:606,33,0	1/1:1,22:26:44.90:864,45,0	1/1:2,19:23:35.50:580,35,0	1/1:2,34:37:93.04:1759,93,0	1/1:2,16:17:24.08:476,24,0	1/1:1,13:15:38.81:522,39,0	1/1:2,13:16:41.78:465,42,0	1/1:2,19:22:15.02:208,15,0	1/1:2,18:20:41.66:586,42,0	1/1:0,8:10:14.94:192,15,0	1/1:0,17:17:30.10:602,30,0	0/0:26,0:26:69.18:0,69,1043	1/1:0,20:22:62.88:718,63,0	1/1:0,5:22:33.04:466,33,0	1/1:0,9:9:9.03:179,9,0
chr10	13024523	.	TA	T	6929.55	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=2.647;DP=466;FS=1.664;HRun=9;HaplotypeScore=57.3686;InbreedingCoeff=0.9165;MQ=71.11;MQ0=2;MQRankSum=-4.064;QD=18.43;ReadPosRankSum=2.171;VQSLOD=5.0214;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:51.14:0,51,578	1/1:0,9:9:27.01:247,27,0	0/0:23,0:16:42.31:0,42,361	0/0:21,0:14:12.78:0,13,157	1/1:2,19:21:50.99:458,51,0	1/1:2,16:18:39.02:357,39,0	1/1:0,6:6:18.01:165,18,0	1/1:6,0:24:31.49:91,31,0	1/1:3,17:20:42.02:384,42,0	1/1:3,19:22:57.03:522,57,0	1/1:3,12:15:24:220,24,0	1/1:0,11:11:30.02:275,30,0	1/1:1,13:14:30.02:274,30,0	1/1:1,16:17:30.02:275,30,0	1/1:1,17:18:36.02:329,36,0	1/1:1,17:18:48.02:439,48,0	1/1:2,31:33:73.76:755,74,0	1/1:2,25:27:54.03:494,54,0	1/1:4,0:14:20.84:61,21,0	1/1:1,0:13:22.40:66,22,0	1/1:1,0:9:14.26:42,14,0	1/1:0,2:2:3:27,3,0	1/1:0,12:12:36.02:329,36,0	1/1:0,8:8:15.01:137,15,0	0/0:24,0:24:72.19:0,72,819	1/1:3,20:23:60:543,60,0	1/1:1,16:17:39.02:357,39,0	1/1:0,4:4:9:82,9,0
chr10	13025637	.	C	CTTTT	10084.43	PASS	AB=0.967;AC=48;AF=0.857;AN=56;BaseQRankSum=0.944;DP=556;FS=29.144;HRun=11;HaplotypeScore=143.3396;InbreedingCoeff=0.6917;MQ=52.40;MQ0=25;MQRankSum=-5.523;QD=21.73;ReadPosRankSum=-0.810;VQSLOD=0.8646;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:19,0:18:2.31:2,0,370	1/1:8,0:8:6.02:89,6,0	0/0:52,0:17:38.48:0,38,431	0/0:26,0:4:8.99:0,9,86	1/1:22,3:22:41.62:629,42,0	1/1:11,0:11:5.06:93,5,0	1/1:24,0:24:17.94:129,18,0	1/1:23,3:23:26.93:376,27,0	1/1:15,2:18:35.29:512,35,0	1/1:12,1:15:31.93:399,32,0	1/1:12,0:12:17.24:208,17,0	1/1:14,2:14:33.10:570,33,0	1/1:16,2:16:24.52:393,25,0	1/1:11,2:14:22.84:411,23,0	1/1:18,1:19:21.88:401,22,0	1/1:11,0:10:23.89:318,24,0	1/1:32,5:32:64.58:1006,65,0	1/1:22,1:21:35.30:619,35,0	1/1:19,2:19:25.57:257,26,0	1/1:8,3:10:21.05:376,21,0	0/1:13,1:14:14.77:169,0,15	1/1:19,0:17:33.37:340,33,0	1/1:23,2:23:44.67:693,45,0	1/1:13,3:14:18.06:346,18,0	0/0:13,0:12:15.86:0,16,222	1/1:19,3:20:44.98:722,45,0	1/1:19,2:21:45.22:656,45,0	1/1:13,1:14:17.63:369,18,0
chr10	13025648	.	TCCCCCC	T	6024.21	PASS	AB=0.680;AC=38;AF=0.679;AN=56;BaseQRankSum=6.240;DP=517;FS=9.217;HRun=13;HaplotypeScore=136.7811;InbreedingCoeff=0.2902;MQ=49.10;MQ0=34;MQRankSum=-5.461;QD=16.60;ReadPosRankSum=6.766;VQSLOD=0.6545;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:21:45.11:0,45,1075	1/1:1,0:3:2.82:39,3,0	0/0:60,0:16:30.25:0,30,564	0/0:37,0:4:9.01:0,9,118	1/1:10,6:20:14.24:257,14,0	0/1:5,0:10:4.90:5,0,36	0/0:11,0:19:23.86:0,24,301	0/1:9,0:12:72.67:151,0,73	0/1:9,4:17:74.81:221,0,75	1/1:10,7:17:21.46:379,21,0	1/1:5,4:11:18.04:259,18,0	1/1:13,2:14:8.39:150,8,0	1/1:8,2:12:9.34:163,9,0	1/1:6,5:14:24.06:460,24,0	0/1:9,1:15:99:256,0,174	1/1:4,2:10:17.77:271,18,0	0/1:22,7:34:99:632,0,137	0/1:11,3:17:67.01:241,0,67	0/1:5,0:13:64.68:330,0,65	1/1:4,0:9:10.99:174,11,0	0/1:8,0:10:87.58:119,0,88	1/1:4,5:13:26.84:410,27,0	1/1:11,4:21:23.54:359,24,0	1/1:11,1:11:4.35:66,4,0	0/0:15,0:13:22.63:0,23,556	1/1:10,4:17:19.42:346,19,0	1/1:8,11:23:37.35:565,37,0	1/1:5,0:9:11.53:172,12,0
chr10	13026380	.	G	GAA	21975.73	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=20.489;DP=725;FS=5.113;HRun=0;HaplotypeScore=143.7613;InbreedingCoeff=0.9999;MQ=80.11;MQ0=0;MQRankSum=-3.546;QD=50.52;ReadPosRankSum=6.074;VQSLOD=4.8665;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:59,0:59:99:0,175,2766	1/1:0,10:10:30.10:576,30,0	0/0:21,0:21:55.25:0,55,906	0/0:20,0:20:60.20:0,60,973	1/1:0,25:26:75.22:1328,75,0	0/0:22,0:22:57.19:0,57,929	0/0:34,0:34:99:0,99,1561	0/0:28,0:28:81.26:0,81,1277	1/1:0,20:20:60.21:1132,60,0	1/1:1,34:37:99:1879,105,0	1/1:1,22:24:60.20:1093,60,0	1/1:2,24:26:65.89:1208,66,0	1/1:1,23:25:66.23:1253,66,0	1/1:0,36:37:87.30:1644,87,0	1/1:0,33:33:96.33:1814,96,0	1/1:0,19:19:48.16:906,48,0	1/1:0,33:32:96.33:1800,96,0	1/1:0,27:28:75.21:1328,75,0	0/0:24,0:24:72.25:0,72,1174	0/0:18,0:18:48.16:0,48,777	0/0:46,0:46:99:0,132,2149	1/1:0,22:22:63.22:1199,63,0	1/1:1,18:19:45.06:853,45,0	1/1:0,22:22:60.39:1136,60,0	0/0:18,0:18:51.17:0,51,828	1/1:0,25:26:75.25:1367,75,0	1/1:0,16:16:42.14:778,42,0	1/1:0,12:12:36.12:683,36,0
chr10	13026739	.	TA	T	3546.95	PASS	AB=0.616;AC=45;AF=0.804;AN=56;BaseQRankSum=0.201;DP=467;FS=1.400;HRun=14;HaplotypeScore=62.0234;InbreedingCoeff=0.5564;MQ=51.40;MQ0=48;MQRankSum=1.648;QD=8.89;ReadPosRankSum=4.024;VQSLOD=3.0030;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:30:36.54:0,37,353	1/1:3,8:9:23.76:161,24,0	0/0:6,0:4:6.42:0,6,44	0/0:6,0:5:10.24:0,10,49	1/1:8,15:20:39.82:276,40,0	0/1:7,14:20:16.54:187,0,17	1/1:4,5:9:12.99:73,13,0	1/1:17,0:24:21.95:73,22,0	1/1:3,9:12:1.55:104,2,0	1/1:7,9:13:20.71:142,21,0	1/1:7,12:17:29.67:205,30,0	1/1:13,10:22:27.47:180,27,0	1/1:5,7:11:17.77:122,18,0	1/1:5,5:8:11.87:82,12,0	1/1:10,12:21:32.61:224,33,0	1/1:5,8:10:20.73:139,21,0	0/1:8,7:12:11.80:67,0,12	1/1:5,15:19:33.58:228,34,0	1/1:10,0:15:17.53:64,18,0	1/1:6,0:17:17.87:51,18,0	1/1:2,0:7:10.18:29,10,0	1/1:2,3:5:2.95:21,3,0	0/1:3,10:12:1.08:137,0,1	1/1:0,6:7:16.92:109,17,0	0/0:21,0:21:39.50:0,40,303	1/1:8,23:29:67.29:452,67,0	1/1:5,10:17:4.38:163,4,0	1/1:3,15:19:39.55:257,40,0
chr10	13027048	.	A	AGT	21946.13	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=11.280;DP=596;FS=2.392;HRun=0;HaplotypeScore=180.2690;InbreedingCoeff=0.9990;MQ=81.49;MQ0=0;MQRankSum=-7.140;QD=44.97;ReadPosRankSum=3.660;VQSLOD=5.0854;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,141,2113	1/1:1,7:8:24.05:338,24,0	0/0:25,0:25:60.12:0,60,844	0/0:18,0:18:39.97:0,40,609	1/1:0,19:19:51.17:793,51,0	1/1:1,14:15:45.15:711,45,0	1/1:1,14:15:45.15:654,45,0	1/1:2,25:27:78.27:1217,78,0	1/1:3,14:17:51.16:789,51,0	1/1:1,30:31:90.28:1442,90,0	1/1:1,8:9:27.06:395,27,0	1/1:1,25:27:81.25:1243,81,0	1/1:1,22:23:66.22:1022,66,0	1/1:0,15:15:45.15:698,45,0	1/1:0,24:28:75.25:1164,75,0	1/1:0,23:23:69.23:1101,69,0	1/1:0,21:21:60.20:978,60,0	1/1:2,19:21:60.20:958,60,0	1/1:1,19:20:53.86:862,54,0	1/1:1,19:20:60.20:913,60,0	1/1:1,17:18:48.16:774,48,0	1/1:2,20:22:63.21:955,63,0	1/1:4,20:24:66.21:995,66,0	1/1:2,23:25:72.20:1120,72,0	0/0:17,0:17:51.16:0,51,807	1/1:1,24:25:75.25:1215,75,0	1/1:1,23:24:72.24:1110,72,0	1/1:0,10:11:33.11:502,33,0
chr10	13027051	.	A	AG	16982.07	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=12.238;DP=636;FS=1.293;HRun=1;HaplotypeScore=204.1537;InbreedingCoeff=0.9990;MQ=79.31;MQ0=0;MQRankSum=-10.295;QD=32.04;ReadPosRankSum=3.347;VQSLOD=4.5055;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,132,1822	1/1:2,6:9:23.78:231,24,0	0/0:25,0:25:53.51:0,54,779	0/0:19,0:19:55.06:0,55,625	1/1:3,19:22:54.11:590,54,0	1/1:2,15:17:48.05:529,48,0	1/1:8,14:22:60.59:608,61,0	1/1:10,25:35:99:1141,102,0	1/1:4,15:19:53.95:574,54,0	1/1:2,30:32:96.17:1107,96,0	1/1:3,8:11:27.07:313,27,0	1/1:1,26:27:81.08:900,81,0	1/1:5,22:27:80.96:878,81,0	1/1:3,15:18:51.05:563,51,0	1/1:4,24:28:78.18:881,78,0	1/1:0,23:23:69.19:801,69,0	1/1:3,19:22:63.19:748,63,0	1/1:2,19:21:61.05:694,61,0	1/1:6,14:20:56.98:658,57,0	1/1:0,21:21:60.15:651,60,0	1/1:1,17:18:51.15:610,51,0	1/1:5,20:25:71.81:732,72,0	1/1:4,20:24:72.15:792,72,0	1/1:2,23:25:71.97:802,72,0	0/0:17,0:17:51.17:0,51,712	1/1:6,22:28:84.23:1007,84,0	1/1:2,23:25:72.19:811,72,0	1/1:1,10:11:33.05:361,33,0
chr10	13027297	.	A	AAAAC	16647.09	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-4.385;DP=722;FS=1.543;HRun=0;HaplotypeScore=145.3674;InbreedingCoeff=0.9969;MQ=63.94;MQ0=4;MQRankSum=-2.122;QD=38.71;ReadPosRankSum=6.321;VQSLOD=5.1649;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:84.25:0,84,1339	1/1:0,9:9:21.07:485,21,0	0/0:34,0:27:59.75:0,60,858	0/0:41,0:31:53.72:0,54,735	1/1:3,14:18:45.10:939,45,0	0/0:24,0:24:63.21:0,63,1018	0/0:33,0:33:72.21:0,72,1107	0/0:33,0:33:72.20:0,72,1043	1/1:7,17:23:36.12:891,36,0	1/1:10,19:29:57.19:1329,57,0	1/1:6,12:18:33.11:707,33,0	1/1:2,15:18:39.13:969,39,0	1/1:5,12:16:21.07:522,21,0	1/1:4,14:20:33.11:820,33,0	1/1:10,32:42:66.10:1642,66,0	1/1:10,22:33:48.16:1194,48,0	1/1:6,11:19:18.06:448,18,0	1/1:12,13:25:36.59:897,37,0	0/0:24,0:23:39.11:0,39,578	0/0:24,0:24:63.11:0,63,1025	0/0:24,0:24:63.19:0,63,983	1/1:5,21:28:51.17:1267,51,0	1/1:6,12:21:23.20:527,23,0	1/1:3,21:27:33.07:767,33,0	0/0:17,0:17:42.14:0,42,676	1/1:6,27:34:78.24:1725,78,0	1/1:10,19:29:32.78:774,33,0	1/1:3,12:18:30.10:746,30,0
chr10	13028161	.	ACT	A	3012.52	PASS	AB=0.971;AC=23;AF=0.411;AN=56;BaseQRankSum=1.435;DP=807;FS=2.406;HRun=0;HaplotypeScore=209.7011;InbreedingCoeff=-0.5350;MQ=42.24;MQ0=46;MQRankSum=-2.388;QD=5.14;ReadPosRankSum=-6.700;VQSLOD=1.4099;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:43.11:0,43,1478	0/1:13,1:14:41.52:84,0,42	0/0:51,0:3:1.31:0,1,50	0/0:52,0:5:2.19:0,2,100	1/1:19,0:19:11.69:146,12,0	0/0:20,0:20:37.40:0,37,687	0/0:27,0:26:29.70:0,30,697	0/1:45,0:45:99:228,0,730	0/1:34,2:36:50.78:219,0,51	0/1:35,1:36:99:370,0,136	0/1:25,0:25:40.24:55,0,40	0/1:37,3:39:99:240,0,164	0/1:21,0:21:97.75:110,0,98	0/1:17,3:20:94.19:148,0,94	0/1:26,1:26:77.06:153,0,77	0/1:33,1:32:99:194,0,186	0/1:22,0:22:51.86:142,0,52	0/1:17,0:17:63.85:174,0,64	0/1:21,0:20:81.70:82,0,310	0/1:30,0:29:10.11:10,0,1008	0/1:32,0:30:7.08:7,0,695	0/1:16,2:29:3.42:128,0,3	0/1:21,1:21:43.86:75,0,44	0/1:30,1:29:73.46:130,0,73	0/0:22,0:22:31.84:0,32,833	0/1:32,2:34:99:311,0,190	0/1:19,0:17:27.26:27,0,137	0/1:11,0:11:5:135,0,5
chr10	13028163	.	T	TCA	1247.58	PASS	AB=0.883;AC=13;AF=0.232;AN=56;BaseQRankSum=4.850;DP=820;FS=29.240;HRun=0;HaplotypeScore=234.3255;InbreedingCoeff=-0.1419;MQ=41.80;MQ0=46;MQRankSum=-8.365;QD=4.32;ReadPosRankSum=-4.503;VQSLOD=1.1150;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,105,1283	0/1:11,3:14:22.48:22,0,71	0/0:51,0:3:3:0,3,36	0/0:50,0:4:6.02:0,6,73	1/1:18,1:19:12.27:60,12,0	0/0:21,0:21:27.74:0,28,240	0/0:29,0:28:32.55:0,33,347	0/0:52,0:52:31.69:0,32,764	0/1:31,4:35:45.42:45,0,120	0/1:33,3:36:99:302,0,153	0/0:19,5:25:11.57:0,12,93	0/0:37,2:38:32.56:0,33,308	0/1:19,2:21:99:121,0,111	0/0:20,0:20:24.53:0,25,174	0/1:25,3:27:60.44:60,0,131	0/0:29,4:31:19.50:0,20,285	0/1:17,5:22:74.78:168,0,75	0/1:17,2:19:61.28:156,0,61	0/0:23,0:22:20.20:0,20,263	0/0:33,0:32:37.90:0,38,755	0/0:34,0:32:50.95:0,51,609	0/1:23,6:28:25.50:107,0,25	0/0:20,0:19:8.37:0,8,82	0/0:28,3:29:14.97:0,15,114	0/0:22,0:22:51.14:0,51,635	0/1:32,2:34:99:143,0,154	0/1:19,1:19:75.13:177,0,75	0/1:9,2:11:38.18:42,0,38
chr10	13028169	.	ACT	A	1642.46	PASS	AB=0.981;AC=24;AF=0.429;AN=56;BaseQRankSum=6.281;DP=811;FS=9.506;HRun=0;HaplotypeScore=226.2446;InbreedingCoeff=-0.5189;MQ=41.24;MQ0=44;MQRankSum=-5.293;QD=2.81;ReadPosRankSum=-6.583;VQSLOD=-0.4159;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:55.85:0,56,1628	0/1:15,0:15:50.38:50,0,67	0/0:41,0:3:2.89:0,3,19	0/0:49,0:4:5.65:0,6,31	1/1:18,1:20:16.90:178,17,0	0/1:22,1:23:31.49:31,0,155	0/1:31,0:30:53.90:54,0,182	0/1:55,0:55:99:273,0,1022	0/1:38,0:38:70.83:71,0,102	0/1:34,0:34:99:107,0,297	0/1:19,8:27:21.43:21,0,38	0/1:35,0:34:99:114,0,185	0/1:17,0:17:25.49:25,0,122	0/1:20,0:20:64.67:65,0,99	0/1:25,2:26:99:114,0,140	0/1:31,0:29:53.60:54,0,223	0/1:22,0:22:42.52:43,0,141	0/1:18,0:18:73.06:73,0,73	0/1:22,0:21:82.72:83,0,424	0/1:31,0:30:56.06:56,0,969	0/0:36,1:34:30.51:0,31,676	1/1:31,0:30:8.80:139,9,0	0/1:20,1:21:56.78:81,0,57	0/0:28,0:26:1.96:0,2,145	0/0:21,0:21:51.01:0,51,811	0/1:33,0:33:50.65:51,0,386	0/1:22,0:20:32.15:32,0,152	0/1:11,0:11:11.54:88,0,12
chr10	13028178	.	A	AAC	3112.37	PASS	AB=0.896;AC=29;AF=0.558;AN=52;BaseQRankSum=3.403;DP=780;FS=14.889;HRun=0;HaplotypeScore=239.6023;InbreedingCoeff=-0.1116;MQ=41.22;MQ0=47;MQRankSum=-3.932;QD=5.37;ReadPosRankSum=-3.806;VQSLOD=1.1929;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:51:1.83:0,2,469	1/1:14,0:14:9.91:118,10,0	./.	0/0:40,0:2:3:0,3,29	0/1:16,2:18:10.49:215,0,10	0/0:12,0:20:8.35:0,8,42	0/0:19,0:33:14.18:0,14,89	1/1:56,0:56:1.46:22,1,0	0/1:22,14:37:26.88:69,0,27	0/1:34,1:34:33.93:279,0,34	0/1:21,1:22:7.76:101,0,8	0/1:24,7:32:1.49:370,0,1	1/1:17,2:19:14.18:228,14,0	0/1:18,2:20:13.94:110,0,14	0/1:27,1:27:9.73:303,0,10	1/1:27,2:28:29.80:331,30,0	1/1:23,0:23:9.72:66,10,0	0/1:17,1:18:14.10:106,0,14	0/1:29,0:29:2.66:14,0,3	1/1:31,0:29:2.72:23,3,0	1/1:34,0:29:2.60:20,3,0	0/1:29,1:29:35.65:246,0,36	0/1:19,2:20:7.53:242,0,8	1/1:28,0:26:11.91:143,12,0	0/0:18,0:19:7.09:0,7,210	0/1:33,0:32:41.46:146,0,41	0/1:8,12:19:35.88:117,0,36	./.
chr10	13030282	.	AC	A	9781.55	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=14.169;DP=471;FS=3.739;HRun=1;HaplotypeScore=53.0980;InbreedingCoeff=0.9584;MQ=64.71;MQ0=0;MQRankSum=0.764;QD=33.27;ReadPosRankSum=4.014;VQSLOD=4.5678;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:35:99:0,102,1414	1/1:0,11:11:30.05:395,30,0	0/0:7,0:6:8.19:0,8,130	0/0:4,0:3:6:0,6,62	1/1:0,18:18:51.06:646,51,0	1/1:0,11:11:33.11:460,33,0	1/1:0,18:18:42.11:563,42,0	0/0:34,0:34:99:0,102,1355	1/1:0,9:9:24.08:334,24,0	1/1:1,17:18:54.06:711,54,0	1/1:0,10:10:26.99:332,27,0	1/1:0,23:23:54.14:731,54,0	1/1:0,13:13:33.08:439,33,0	1/1:0,8:8:18.06:251,18,0	1/1:0,11:11:30.10:418,30,0	1/1:0,20:20:36.12:502,36,0	1/1:0,40:40:99:1378,99,0	1/1:1,15:15:39.13:543,39,0	0/0:28,0:28:84.23:0,84,1094	0/0:23,0:23:63.16:0,63,855	0/0:20,0:20:60.18:0,60,837	1/1:0,6:6:17.97:207,18,0	1/1:0,8:8:11.91:167,12,0	1/1:0,10:10:21.07:293,21,0	0/0:25,0:25:75.19:0,75,998	1/1:0,19:19:57.15:744,57,0	1/1:0,19:19:33.11:460,33,0	1/1:0,6:6:15.05:208,15,0
chr10	13030784	.	AAG	A	783.40	PASS	AB=0.986;AC=22;AF=0.393;AN=56;BaseQRankSum=14.228;DP=519;FS=27.141;HRun=0;HaplotypeScore=145.8064;InbreedingCoeff=-0.3848;MQ=56.80;MQ0=1;MQRankSum=-13.032;QD=2.03;ReadPosRankSum=0.190;VQSLOD=1.0364;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:56.09:0,56,902	0/1:9,0:9:3.86:4,0,13	0/0:23,0:11:13.77:0,14,155	0/0:18,0:10:0.20:0,0,22	0/1:24,1:25:33.56:34,0,117	0/0:14,0:14:7.27:0,7,192	0/1:14,0:14:1.56:2,0,166	0/1:29,0:29:99:103,0,146	0/1:20,0:20:30.21:30,0,106	0/1:19,0:19:18.68:19,0,72	0/1:20,0:19:64.79:79,0,65	0/0:12,0:12:3.86:0,4,63	0/1:14,0:14:56.26:56,0,83	1/1:11,0:11:5.70:29,6,0	0/1:19,2:21:38.14:57,0,38	0/1:21,0:21:14.34:14,0,40	0/1:18,0:18:13.73:14,0,87	0/0:11,0:11:10.84:0,11,53	0/1:17,0:17:34.57:35,0,36	0/1:14,0:14:43.19:69,0,43	0/0:9,0:9:11.15:0,11,62	0/1:34,0:34:99:117,0,101	0/1:17,0:17:31.29:31,0,77	0/1:19,1:20:13.64:14,0,65	0/0:9,0:9:21.74:0,22,328	0/1:22,1:23:52.56:80,0,53	0/1:27,1:28:23.90:103,0,24	1/1:11,0:11:13.29:52,13,0
chr10	13030786	.	GAAAA	G	11174.77	PASS	AB=0.667;AC=43;AF=0.768;AN=56;BaseQRankSum=4.939;DP=526;FS=19.712;HRun=14;HaplotypeScore=135.2789;InbreedingCoeff=0.9050;MQ=58.99;MQ0=1;MQRankSum=-6.295;QD=27.39;ReadPosRankSum=4.911;VQSLOD=1.9351;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:40:99:0,111,2133	1/1:2,8:10:28.83:344,29,0	0/0:23,0:11:20.65:0,21,292	0/0:20,0:11:16.73:0,17,175	1/1:9,17:27:50.83:637,51,0	0/0:7,0:12:31.33:0,31,523	0/0:10,0:14:33.06:0,33,571	1/1:12,0:30:37.73:212,38,0	1/1:9,12:21:51.04:641,51,0	1/1:5,12:19:51.09:667,51,0	1/1:4,16:19:44.95:555,45,0	1/1:5,7:12:27.06:381,27,0	1/1:4,8:12:26.24:337,26,0	1/1:3,8:11:33.11:465,33,0	1/1:3,15:19:51.12:708,51,0	1/1:5,16:22:38.93:788,39,0	1/1:8,9:18:35.47:458,35,0	1/1:3,7:10:24.03:340,24,0	1/1:5,1:19:41.44:252,41,0	1/1:6,0:15:18.72:111,19,0	0/1:4,0:8:8.88:29,0,9	1/1:5,29:34:75.03:979,75,0	1/1:5,13:18:43.03:544,43,0	1/1:5,14:19:36.05:508,36,0	0/0:9,0:9:27.09:0,27,624	1/1:7,15:22:57.12:793,57,0	1/1:7,23:31:79.34:1040,79,0	1/1:1,9:11:28.81:386,29,0
chr10	13030832	.	G	GA	18126.92	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=1.749;DP=503;FS=2.067;HRun=3;HaplotypeScore=89.3158;InbreedingCoeff=0.9899;MQ=71.99;MQ0=0;MQRankSum=-8.427;QD=43.78;ReadPosRankSum=2.395;VQSLOD=3.7300;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:90.30:0,90,1255	1/1:1,8:9:27.07:407,27,0	0/0:21,0:21:52.70:0,53,695	0/0:17,0:15:14.53:0,15,350	1/1:2,19:21:51.16:779,51,0	1/1:0,8:8:21.07:335,21,0	1/1:0,12:12:30.10:464,30,0	1/1:0,27:27:81.25:1268,81,0	1/1:0,16:16:45.15:716,45,0	1/1:0,28:28:84.24:1311,84,0	1/1:0,18:18:51.17:809,51,0	1/1:1,8:9:23.94:361,24,0	1/1:0,17:17:51.17:813,51,0	1/1:2,8:10:24.08:381,24,0	1/1:0,17:17:51.17:813,51,0	1/1:0,20:20:57.19:910,57,0	1/1:2,19:21:57.17:872,57,0	1/1:1,14:15:45.13:692,45,0	1/1:7,14:21:60.13:855,60,0	1/1:1,12:13:36.12:571,36,0	1/1:1,7:8:18.06:287,18,0	1/1:1,20:21:60.20:901,60,0	1/1:0,15:15:45.15:689,45,0	1/1:2,10:12:30.06:421,30,0	0/0:19,0:19:57.18:0,57,780	1/1:0,24:24:72.25:1145,72,0	1/1:1,36:38:99:1671,108,0	1/1:0,14:14:42.14:655,42,0
chr10	13030871	.	GAA	G	1725.50	PASS	AB=0.875;AC=9;AF=0.161;AN=56;BaseQRankSum=1.286;DP=583;FS=5.466;HRun=12;HaplotypeScore=126.0584;InbreedingCoeff=0.8446;MQ=67.21;MQ0=1;MQRankSum=-1.029;QD=18.36;ReadPosRankSum=-0.832;VQSLOD=2.2160;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:48:99:0,125,1673	0/0:8,0:8:18.06:0,18,258	0/0:14,0:10:11.91:0,12,139	0/0:16,0:14:8.80:0,9,78	0/0:29,0:29:72.47:0,72,927	0/0:12,0:14:35.08:0,35,446	0/1:12,2:14:21.92:22,0,417	1/1:8,17:26:49.81:590,50,0	0/0:19,0:19:45.12:0,45,630	0/0:34,0:35:81.24:0,81,1112	0/0:13,0:16:36.09:0,36,460	0/0:15,0:16:39.12:0,39,546	0/0:15,0:15:36.09:0,36,512	0/0:15,0:15:42.09:0,42,580	0/0:30,0:32:92.23:0,92,1220	0/0:18,0:18:39.11:0,39,545	0/0:27,0:27:72.23:0,72,1054	0/0:15,0:15:36.09:0,36,497	1/1:1,20:22:56.81:554,57,0	1/1:3,12:15:30:298,30,0	1/1:2,15:17:42.07:427,42,0	0/0:19,0:19:39.10:0,39,523	0/0:3,0:13:30.04:0,30,299	0/0:3,0:12:27:0,27,244	0/0:24,0:25:65.67:0,66,875	0/0:27,0:27:60.15:0,60,831	0/0:45,0:45:99:0,108,1473	0/0:9,0:10:26.56:0,27,331
chr10	13031887	.	ATAAACCCTCTGCAGTTTGGTAATC	A	3067.90	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=8.448;DP=635;FS=0.763;HRun=0;HaplotypeScore=371.0891;InbreedingCoeff=0.9893;MQ=92.41;MQ0=0;MQRankSum=-4.566;QD=41.46;ReadPosRankSum=-1.251;VQSLOD=1.3688;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,117,11183	0/0:7,0:7:21.07:0,21,2130	0/0:26,0:26:60.21:0,60,3830	0/0:30,0:30:81.28:0,81,6020	0/0:13,0:13:36.12:0,36,3849	0/0:17,0:17:51.18:0,51,5112	0/0:24,0:24:69.22:0,69,5473	1/1:17,6:23:18:359,18,0	0/0:21,0:21:63.22:0,63,6276	0/0:28,0:28:84.28:0,84,7754	0/0:10,0:10:30.10:0,30,3098	0/0:24,0:24:66.21:0,66,5834	0/0:31,0:31:90.30:0,90,8883	0/0:19,0:19:57.20:0,57,5513	0/0:28,0:28:84.27:0,84,7854	0/0:40,0:40:99:0,117,11664	0/0:36,0:36:99:0,108,10232	0/0:24,0:24:72.25:0,72,6853	1/1:7,7:14:21.06:1224,21,0	1/1:4,9:12:18.06:899,18,0	1/1:8,16:24:17.49:744,17,0	0/0:21,0:21:60.21:0,60,6405	0/0:14,0:14:39.13:0,39,3581	0/0:27,0:27:81.28:0,81,7865	0/0:22,0:22:66.23:0,66,6497	0/0:25,0:25:75.26:0,75,6790	0/0:26,0:26:78.25:0,78,7830	0/0:7,0:7:21.07:0,21,2241
chr10	13032451	.	CTGTG	C	1681.76	PASS	AB=0.914;AC=31;AF=0.620;AN=50;BaseQRankSum=2.246;DP=576;FS=0.877;HRun=0;HaplotypeScore=90.9358;InbreedingCoeff=0.5538;MQ=71.51;MQ0=20;MQRankSum=1.533;QD=5.41;ReadPosRankSum=1.783;VQSLOD=1.8478;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:21:27.04:0,27,495	./.	./.	./.	0/0:19,0:19:3.01:0,3,43	0/0:21,0:18:9.50:0,10,158	0/1:29,3:32:31.87:41,0,32	0/0:29,0:26:4.26:0,4,41	1/1:21,4:24:10.04:185,10,0	1/1:18,0:17:2.22:20,2,0	1/1:7,1:8:6.02:92,6,0	1/1:20,0:21:9.02:120,9,0	1/1:8,3:11:7.56:177,8,0	1/1:19,1:21:11.95:137,12,0	1/1:21,1:20:9.03:144,9,0	1/1:7,4:11:7.27:95,7,0	1/1:35,3:37:19.93:393,20,0	1/1:10,5:16:9.02:120,9,0	0/0:22,0:20:5.93:0,6,86	0/0:9,0:9:3.01:0,3,65	0/0:43,0:39:12.04:0,12,231	0/0:8,2:10:0:0,0,0	1/1:12,0:13:8.47:84,8,0	1/1:19,9:29:2.89:46,3,0	0/0:15,0:15:18.03:0,18,314	1/1:22,0:22:8.44:102,8,0	1/1:12,4:16:2.86:46,3,0	1/1:8,0:6:3.01:44,3,0
chr10	13032573	.	G	GT	6160.67	PASS	AB=0.585;AC=36;AF=0.643;AN=56;BaseQRankSum=-8.500;DP=595;FS=1.276;HRun=13;HaplotypeScore=73.5573;InbreedingCoeff=0.6815;MQ=74.80;MQ0=2;MQRankSum=-0.747;QD=14.13;ReadPosRankSum=2.550;VQSLOD=5.6308;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:34:76.21:0,76,515	0/1:2,7:9:2.58:116,0,3	0/0:20,0:14:12.85:0,13,73	0/0:16,0:13:11.66:0,12,77	1/1:7,21:29:58.36:465,58,0	1/1:1,2:21:39.93:215,40,0	1/1:6,2:25:43.51:247,44,0	0/0:6,0:22:34.08:0,34,103	1/1:8,16:26:0.76:314,1,0	1/1:5,19:26:28.35:445,28,0	0/1:10,16:26:41.84:302,0,42	1/1:4,17:21:0.88:293,1,0	1/1:1,11:14:17.63:237,18,0	1/1:7,16:25:18.13:286,18,0	1/1:6,23:30:24.88:503,25,0	1/1:4,19:23:26.46:354,26,0	1/1:6,23:29:30.68:475,31,0	1/1:3,6:9:21.02:194,21,0	0/0:9,0:16:19.62:0,20,69	0/0:4,0:19:26.41:0,26,76	0/0:2,0:17:27.38:0,27,89	1/1:3,12:16:26.82:228,27,0	0/1:3,10:14:1.01:180,0,1	1/1:5,17:22:16.40:304,16,0	0/0:14,0:15:37.19:0,37,236	1/1:9,25:35:17.08:556,17,0	1/1:6,21:27:12.78:392,13,0	0/1:3,3:9:3.68:57,0,4
chr10	13032947	.	TAA	T	7905.99	PASS	AB=0.580;AC=40;AF=0.714;AN=56;BaseQRankSum=-7.392;DP=456;FS=16.859;HRun=11;HaplotypeScore=68.3740;InbreedingCoeff=0.8343;MQ=75.62;MQ0=2;MQRankSum=-2.436;QD=24.03;ReadPosRankSum=2.727;VQSLOD=2.8145;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:17:41.58:0,42,578	1/1:1,10:11:30.07:319,30,0	0/0:26,0:17:30.05:0,30,399	0/0:17,0:14:24.12:0,24,301	1/1:2,27:29:81.19:862,81,0	1/1:2,14:16:39.09:415,39,0	1/1:1,10:11:30.07:319,30,0	0/1:5,1:28:10.10:10,0,135	1/1:2,6:9:20.79:204,21,0	1/1:2,25:26:72.18:766,72,0	1/1:1,21:23:53.99:618,54,0	1/1:2,13:15:39.09:415,39,0	1/1:5,9:13:24.03:255,24,0	1/1:2,10:12:29.74:298,30,0	1/1:2,13:15:36.08:383,36,0	1/1:1,11:12:30.06:319,30,0	1/1:2,11:13:33.07:351,33,0	0/1:4,7:11:11.50:199,0,12	0/0:3,0:16:32.32:0,32,111	0/0:4,0:23:44.90:0,45,174	0/0:2,0:10:20.48:0,20,106	1/1:1,9:10:24.05:256,24,0	1/1:0,19:19:47.94:511,48,0	1/1:0,6:6:18.05:192,18,0	0/0:12,0:14:38.62:0,39,559	1/1:2,16:18:48.11:511,48,0	1/1:2,15:17:33.08:351,33,0	1/1:0,13:13:33.08:351,33,0
chr10	13033284	.	G	GTA	20384.76	PASS	AB=0.885;AC=42;AF=0.750;AN=56;BaseQRankSum=-8.291;DP=894;FS=2.654;HRun=0;HaplotypeScore=162.2441;InbreedingCoeff=0.6087;MQ=57.03;MQ0=26;MQRankSum=4.492;QD=29.42;ReadPosRankSum=7.149;VQSLOD=6.1803;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:52:99:0,137,1857	1/1:1,12:12:21.07:399,21,0	0/0:19,0:5:11.70:0,12,106	0/0:30,0:17:47.58:0,48,471	1/1:4,24:28:45.62:845,46,0	1/1:4,15:21:25.39:652,25,0	1/1:4,30:34:33.35:841,33,0	0/1:43,0:43:99:154,0,365	1/1:3,21:24:51.17:955,51,0	1/1:2,37:40:99:1905,99,0	1/1:4,13:17:24.06:569,24,0	1/1:5,32:35:60.12:1110,60,0	1/1:2,24:26:48.16:883,48,0	1/1:2,27:29:54.08:1023,54,0	1/1:0,37:37:63.09:1202,63,0	1/1:4,21:25:48.16:889,48,0	0/1:7,42:48:33.96:1715,0,34	1/1:1,29:30:72.25:1370,72,0	0/1:32,0:25:99:152,0,103	0/1:14,0:14:14.37:14,0,110	0/0:89,0:84:32.97:0,33,824	1/1:0,28:29:36.12:693,36,0	1/1:0,20:20:24.08:462,24,0	1/1:7,74:79:99:2448,129,0	0/0:9,0:9:20.25:0,20,253	1/1:8,23:32:66.31:1269,66,0	1/1:3,19:21:36.09:632,36,0	1/1:3,3:4:12.03:200,12,0
chr10	13037584	.	CAA	C	4241.61	PASS	AB=0.605;AC=43;AF=0.768;AN=56;BaseQRankSum=-0.957;DP=540;FS=2.270;HRun=17;HaplotypeScore=71.1572;InbreedingCoeff=0.7100;MQ=52.48;MQ0=37;MQRankSum=0.029;QD=9.68;ReadPosRankSum=0.846;VQSLOD=3.0390;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:35:70.19:0,70,752	0/0:3,0:1:0:0,0,0	0/0:15,0:7:14.23:0,14,112	0/0:9,0:3:2.96:0,3,19	1/1:10,14:23:29.44:218,29,0	0/1:9,3:26:41.95:42,0,180	0/0:5,0:12:19.09:0,19,68	1/1:8,1:17:24.78:116,25,0	1/1:8,8:13:11.76:93,12,0	1/1:5,7:12:13.94:154,14,0	1/1:5,5:11:20.23:141,20,0	1/1:8,14:24:41.40:318,41,0	1/1:4,5:9:5.86:47,6,0	1/1:4,8:12:20.72:166,21,0	1/1:4,12:16:17.62:181,18,0	1/1:2,9:14:26.43:189,26,0	1/1:12,24:35:53.25:493,53,0	1/1:9,12:19:5.98:224,6,0	1/1:12,1:25:35.65:168,36,0	1/1:9,1:17:32.22:149,32,0	1/1:6,0:10:13.68:58,14,0	1/1:3,15:18:34.42:282,34,0	1/1:6,9:18:11.28:161,11,0	1/1:7,9:19:37.73:272,38,0	0/0:21,0:23:49.03:0,49,532	1/1:9,11:19:0.43:234,0,0	1/1:11,11:21:30.69:252,31,0	1/1:12,13:20:38.27:284,38,0
chr10	13037839	.	TG	T	10140.15	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=9.915;DP=585;FS=14.725;HRun=7;HaplotypeScore=61.9315;InbreedingCoeff=0.9986;MQ=76.52;MQ0=0;MQRankSum=-1.465;QD=25.48;ReadPosRankSum=5.860;VQSLOD=3.8131;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:84.25:0,84,1042	1/1:1,8:9:24.05:245,24,0	0/0:17,0:17:47.97:0,48,529	0/0:17,0:17:36.02:0,36,400	1/1:5,20:25:54.04:550,54,0	0/0:8,0:8:21.05:0,21,249	0/0:17,0:17:39.09:0,39,461	0/0:24,0:24:60.17:0,60,732	1/1:1,23:24:69.16:704,69,0	1/1:1,23:23:66.13:661,66,0	1/1:0,11:11:33.07:336,33,0	1/1:3,27:30:78.17:795,78,0	1/1:3,9:12:24.05:245,24,0	1/1:0,17:17:51.12:520,51,0	1/1:3,27:30:72.16:735,72,0	1/1:4,13:17:33.07:337,33,0	1/1:1,43:44:99:1163,114,0	1/1:1,20:21:54.12:551,54,0	0/0:15,0:15:39.12:0,39,491	0/0:14,0:14:38.79:0,39,488	0/0:30,0:30:72.23:0,72,905	1/1:3,17:20:48.11:490,48,0	1/1:4,20:24:54.12:551,54,0	1/1:2,19:21:51.12:520,51,0	0/0:15,0:15:39.10:0,39,476	1/1:4,30:34:87.10:851,87,0	1/1:2,17:19:48.11:490,48,0	1/1:1,15:16:39.09:398,39,0
chr10	13039674	.	TCA	T	2740.54	PASS	AB=0.856;AC=28;AF=0.538;AN=52;BaseQRankSum=5.594;DP=586;FS=5.803;HRun=0;HaplotypeScore=82.9627;InbreedingCoeff=0.1054;MQ=64.83;MQ0=7;MQRankSum=0.922;QD=6.96;ReadPosRankSum=1.714;VQSLOD=2.7743;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:33:12.02:0,12,156	0/0:13,0:13:3.01:0,3,41	./.	./.	0/0:8,0:15:6.01:0,6,67	0/1:5,2:7:26.30:26,0,36	0/1:26,0:26:11.26:11,0,215	0/0:32,0:32:1.36:0,1,2	0/1:14,4:19:48.39:122,0,48	0/1:19,0:19:20.35:20,0,69	0/0:13,0:13:9.03:0,9,129	1/1:14,9:24:32.75:319,33,0	1/1:12,8:21:23.85:240,24,0	1/1:11,5:15:14.80:161,15,0	0/1:20,5:27:17.79:165,0,18	0/1:19,9:29:5.41:330,0,5	1/1:14,11:26:32.71:337,33,0	1/1:10,9:23:29.41:250,29,0	0/0:25,0:25:6.01:0,6,69	0/1:14,2:16:11.28:11,0,221	0/1:24,2:26:23.33:23,0,75	0/1:15,10:26:8.40:243,0,8	0/1:19,1:20:17.95:26,0,18	1/1:16,14:29:39.10:420,39,0	0/0:12,0:12:9.03:0,9,129	1/1:21,0:22:5.83:41,6,0	1/1:6,6:12:12.03:129,12,0	1/1:3,1:4:3.01:32,3,0
chr10	13041722	.	GT	G	4078.89	PASS	AB=0.890;AC=45;AF=0.804;AN=56;BaseQRankSum=-0.042;DP=335;FS=8.675;HRun=1;HaplotypeScore=87.9800;InbreedingCoeff=-0.2439;MQ=75.11;MQ0=0;MQRankSum=-3.590;QD=12.18;ReadPosRankSum=7.056;VQSLOD=1.5996;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:19,4:22:59.43:268,0,59	1/1:5,0:5:11.81:75,12,0	0/1:8,1:9:54.60:55,0,69	0/1:14,0:15:2.44:61,0,2	1/1:7,1:8:15.41:89,15,0	0/1:13,0:13:12.23:143,0,12	1/1:24,0:24:35.21:265,35,0	0/1:5,2:7:13.91:63,0,14	1/1:13,1:14:37.93:248,38,0	1/1:10,2:12:29.55:232,30,0	0/1:7,2:9:21.90:22,0,28	1/1:11,2:13:37.47:244,37,0	0/1:6,1:7:5.07:87,0,5	0/1:10,0:10:21.13:94,0,21	1/1:12,2:14:12.86:215,13,0	1/1:10,0:10:1.27:116,1,0	1/1:24,1:25:45.23:358,45,0	1/1:16,2:18:11.10:252,11,0	0/1:17,0:17:0.09:158,0,0	1/1:4,2:6:11.64:105,12,0	1/1:17,2:19:6.15:146,6,0	0/1:2,3:5:12.96:82,0,13	0/1:5,0:5:10.24:55,0,10	1/1:9,0:9:23.17:132,23,0	1/1:11,0:11:20.33:154,20,0	1/1:8,0:8:19.77:104,20,0	1/1:12,0:12:1.27:124,1,0	1/1:6,1:7:20.43:131,20,0
chr10	13042389	.	TTA	T	807.69	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=7.496;DP=293;FS=5.530;HRun=0;HaplotypeScore=34.0646;InbreedingCoeff=0.5475;MQ=69.96;MQ0=0;MQRankSum=0.002;QD=26.05;ReadPosRankSum=2.010;VQSLOD=3.4807;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:39.13:0,39,675	0/0:6,0:6:15.05:0,15,256	0/1:4,0:4:5.91:6,0,46	0/0:12,0:7:3.45:0,3,27	0/0:12,0:12:30.10:0,30,505	1/1:0,21:21:60.20:799,60,0	1/1:3,3:6:9.03:120,9,0	0/0:37,0:37:87.29:0,87,1478	0/0:9,0:9:27.09:0,27,463	0/0:8,0:8:21.07:0,21,364	0/0:5,0:5:15.05:0,15,260	0/0:4,0:4:12.03:0,12,181	0/0:4,0:4:12.04:0,12,200	0/0:8,0:8:24.08:0,24,413	0/0:9,0:9:21.07:0,21,356	0/0:5,0:5:15.05:0,15,257	0/0:36,0:36:93.25:0,93,1523	0/0:23,0:23:69.24:0,69,1173	0/0:13,0:13:30.10:0,30,519	0/0:9,0:9:27.09:0,27,460	0/0:2,0:2:3.01:0,3,52	0/0:2,0:2:6.02:0,6,89	0/0:2,0:2:3.01:0,3,52	0/0:3,0:3:6:0,6,76	0/0:13,0:13:30.10:0,30,520	0/0:7,0:7:21.07:0,21,364	0/0:12,0:12:33.11:0,33,565	0/0:8,0:8:21.07:0,21,364
chr10	13043119	.	AC	A	3572.94	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=15.024;DP=404;FS=4.346;HRun=1;HaplotypeScore=128.6661;InbreedingCoeff=0.9546;MQ=71.61;MQ0=0;MQRankSum=-14.293;QD=15.33;ReadPosRankSum=6.574;VQSLOD=3.7601;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:78.27:0,78,1244	1/1:1,4:5:8.88:59,9,0	0/0:17,0:17:41.82:0,42,672	0/0:13,0:13:36.17:0,36,417	1/1:0,24:24:20.55:133,21,0	0/0:11,0:11:33.11:0,33,525	0/0:3,0:3:9.03:0,9,144	0/0:36,0:36:99:0,102,1620	1/1:0,16:16:47.60:333,48,0	1/1:0,20:20:52.83:422,53,0	1/1:0,16:16:23.66:158,24,0	1/1:0,13:15:32.61:223,33,0	1/1:0,11:11:26.75:185,27,0	1/1:1,10:11:20.83:148,21,0	1/1:0,15:15:29.75:209,30,0	1/1:0,14:14:32.74:230,33,0	1/1:0,7:8:20.43:134,20,0	1/1:0,5:6:17.78:124,18,0	0/0:16,0:16:48.16:0,48,766	0/0:27,0:27:81.28:0,81,1290	0/0:8,0:8:21.07:0,21,336	1/1:1,7:8:11.87:82,12,0	1/1:0,11:11:14.87:104,15,0	1/1:1,4:5:5.97:46,6,0	0/0:14,0:13:42.14:0,42,671	1/1:0,20:20:59.70:447,60,0	1/1:0,20:20:53.60:384,54,0	1/1:0,7:7:20.84:152,21,0
chr10	13043121	.	TG	T	1084.23	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=15.166;DP=404;FS=2.446;HRun=1;HaplotypeScore=136.0408;InbreedingCoeff=0.9216;MQ=71.87;MQ0=0;MQRankSum=-14.726;QD=4.73;ReadPosRankSum=7.073;VQSLOD=0.4570;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:78.27:0,78,1231	1/1:1,4:5:7.48:28,7,0	0/0:18,0:18:42.14:0,42,635	0/0:14,0:14:36.25:0,36,437	1/1:2,22:24:17.33:61,17,0	0/0:11,0:11:33.09:0,33,497	0/0:4,0:4:12.04:0,12,188	0/0:35,0:35:99:0,99,1583	1/1:0,16:16:37.94:127,38,0	1/1:1,20:20:45.65:163,46,0	1/1:1,14:15:17.46:56,17,0	1/1:2,13:15:23.49:77,23,0	1/1:0,11:11:21.16:69,21,0	1/1:0,10:10:14.23:47,14,0	1/1:0,15:15:23.71:79,24,0	1/1:0,14:14:25.99:87,26,0	1/1:1,7:8:10.76:42,11,0	1/1:1,5:6:9.39:37,9,0	0/0:16,0:16:45.15:0,45,710	0/0:28,0:28:84.29:0,84,1341	0/0:8,0:8:21.07:0,21,329	1/1:1,7:8:8.67:27,9,0	1/1:0,11:11:11.86:39,12,0	1/1:0,4:4:2.37:8,2,0	0/0:15,0:14:45.15:0,45,711	1/1:1,18:19:43.38:154,43,0	1/1:0,20:20:43.30:148,43,0	1/1:0,7:7:15.60:53,16,0
chr10	13043123	.	AGAGT	A	6848.23	PASS	AB=0.556;AC=35;AF=0.625;AN=56;BaseQRankSum=14.440;DP=404;FS=4.917;HRun=0;HaplotypeScore=136.8518;InbreedingCoeff=0.8662;MQ=70.79;MQ0=0;MQRankSum=-14.532;QD=29.90;ReadPosRankSum=7.289;VQSLOD=4.2134;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:81.25:0,81,2267	0/1:1,4:5:18.55:110,0,19	0/0:17,0:17:42.14:0,42,1145	0/0:14,0:14:39.60:0,40,792	1/1:2,22:24:24.55:312,25,0	0/0:10,0:10:30.10:0,30,862	0/0:5,0:5:15.05:0,15,368	0/0:35,0:35:99:0,99,2807	1/1:0,16:16:48.16:670,48,0	1/1:0,20:19:57.19:821,57,0	1/1:2,14:16:17.73:313,18,0	1/1:1,13:14:14.32:436,14,0	1/1:0,11:11:7.86:344,8,0	1/1:0,10:10:18.06:248,18,0	1/1:0,15:15:15.94:399,16,0	1/1:0,14:14:19.80:440,20,0	1/1:1,7:8:21.07:284,21,0	1/1:1,5:6:18.06:258,18,0	0/0:15,0:15:45.15:0,45,1282	0/0:29,0:29:87.30:0,87,2449	0/0:8,0:8:21.05:0,21,546	1/1:0,7:7:9.03:123,9,0	1/1:0,11:11:15.05:207,15,0	1/1:0,4:4:3.01:42,3,0	0/0:15,0:14:45.13:0,45,1240	1/1:1,18:19:57.16:798,57,0	1/1:2,20:22:48.10:761,48,0	1/1:0,7:7:21.07:284,21,0
chr10	13045103	.	G	GATGTATGT	14890.50	PASS	AC=48;AF=0.889;AN=54;BaseQRankSum=-1.245;DP=875;FS=10.375;HRun=0;HaplotypeScore=225.0778;InbreedingCoeff=0.7616;MQ=63.97;MQ0=5;MQRankSum=-6.489;QD=20.43;ReadPosRankSum=-1.020;VQSLOD=2.8711;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:59,0:59:40.51:0,41,1177	1/1:7,7:16:20.58:854,21,0	0/0:36,0:33:8.96:0,9,130	./.	1/1:29,7:30:11.96:445,12,0	1/1:14,0:22:17.96:146,18,0	1/1:24,0:37:23.80:187,24,0	1/1:36,0:33:18.05:320,18,0	1/1:20,13:33:33.11:1345,33,0	1/1:27,14:41:45.11:1267,45,0	1/1:19,5:23:12.03:374,12,0	1/1:26,0:29:21.07:730,21,0	1/1:21,2:30:33.11:1179,33,0	1/1:17,1:21:9.03:331,9,0	1/1:26,17:40:27.09:1101,27,0	1/1:14,15:30:30.10:1223,30,0	1/1:15,4:21:9.03:367,9,0	1/1:25,0:26:5.97:123,6,0	1/1:16,3:18:3.18:359,3,0	1/1:20,13:30:12.04:489,12,0	1/1:28,9:39:12.02:370,12,0	1/1:34,0:38:23.11:735,23,0	1/1:10,7:16:8.54:352,9,0	1/1:28,1:27:18.03:397,18,0	0/0:25,0:26:38.87:0,39,921	1/1:26,6:29:27.07:935,27,0	1/1:24,11:34:30.07:1015,30,0	1/1:8,4:12:6.02:245,6,0
chr10	13045659	.	C	CT	1080.60	PASS	AB=0.896;AC=9;AF=0.161;AN=56;BaseQRankSum=-6.392;DP=369;FS=3.892;HRun=11;HaplotypeScore=41.2575;InbreedingCoeff=0.5355;MQ=61.24;MQ0=7;MQRankSum=-4.356;QD=12.14;ReadPosRankSum=-2.511;VQSLOD=2.1970;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:20:29.75:0,30,220	0/0:7,0:7:14.94:0,15,116	0/1:11,0:9:4.39:4,0,96	0/0:8,0:9:6.07:0,6,65	0/0:14,0:13:32.87:0,33,255	0/0:1,0:15:24.44:0,24,71	0/0:1,0:10:10.89:0,11,36	1/1:13,25:37:60.71:766,61,0	0/0:11,0:11:8.94:0,9,70	0/0:14,0:14:32.85:0,33,255	0/0:10,0:10:20.89:0,21,162	0/0:11,0:11:14.88:0,15,110	0/0:3,0:3:2.98:0,3,23	0/0:9,0:8:14.94:0,15,116	0/0:15,0:15:20.90:0,21,163	0/1:11,0:11:1.94:2,0,58	0/0:28,0:24:62.65:0,63,478	0/0:14,0:14:29.81:0,30,228	0/1:6,5:11:25.38:131,0,25	1/1:0,5:5:14.99:141,15,0	1/1:5,7:11:18.04:183,18,0	0/0:4,0:4:5.97:0,6,46	0/0:5,0:6:5.82:0,6,46	0/0:6,0:6:11.95:0,12,91	0/0:27,0:27:65.74:0,66,510	0/0:16,0:15:35.85:0,36,279	0/0:13,0:13:32.84:0,33,253	0/0:16,0:14:20.88:0,21,163
chr10	13047034	.	CAAAACA	C	1068.30	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.614;DP=605;FS=4.409;HRun=0;HaplotypeScore=117.9493;InbreedingCoeff=0.9844;MQ=58.85;MQ0=2;MQRankSum=-6.395;QD=28.11;ReadPosRankSum=-0.080;VQSLOD=3.3918;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:48.06:0,48,1833	0/0:7,0:7:18.06:0,18,539	0/0:20,0:13:33.10:0,33,964	0/0:16,0:10:16.20:0,16,378	0/0:26,0:26:72.23:0,72,2210	1/1:2,20:22:36.12:792,36,0	1/1:5,11:16:18.06:396,18,0	0/0:41,0:41:99:0,102,2803	0/0:13,0:13:33.11:0,33,1036	0/0:26,0:26:72.24:0,72,2101	0/0:20,0:20:57.19:0,57,1866	0/0:21,0:21:54.18:0,54,1541	0/0:14,0:14:39.13:0,39,1159	0/0:18,0:18:45.15:0,45,1445	0/0:31,0:30:75.25:0,75,2379	0/0:23,0:23:60.20:0,60,1957	0/0:30,0:30:69.20:0,69,2032	0/0:15,0:15:30.10:0,30,926	0/0:40,0:35:86.78:0,87,2529	0/0:25,0:25:69.23:0,69,2174	0/0:15,0:14:36.12:0,36,1160	0/0:16,0:16:48.16:0,48,1571	0/0:23,0:23:57.19:0,57,1824	0/0:26,0:26:72.24:0,72,2303	0/0:13,0:13:30.10:0,30,987	0/0:22,0:22:57.18:0,57,1713	0/0:26,0:26:69.24:0,69,2262	0/0:11,0:11:33.11:0,33,1118
chr10	13048428	.	TG	T	2323.97	PASS	AB=0.833;AC=11;AF=0.196;AN=56;BaseQRankSum=6.641;DP=627;FS=4.889;HRun=10;HaplotypeScore=70.5334;InbreedingCoeff=0.6831;MQ=76.46;MQ0=0;MQRankSum=-1.140;QD=12.91;ReadPosRankSum=-0.507;VQSLOD=3.4833;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:41.64:0,42,563	0/0:10,0:10:21.06:0,21,232	0/1:26,2:27:58.91:59,0,365	0/0:22,0:20:25.29:0,25,210	0/0:30,0:30:40.58:0,41,662	1/1:6,18:24:47.98:417,48,0	1/1:6,28:34:83.96:729,84,0	0/1:20,1:22:1.97:2,0,197	0/0:21,0:22:15.96:0,16,378	0/0:24,1:25:19.06:0,19,439	0/0:16,0:16:27.06:0,27,290	0/0:23,1:24:25.01:0,25,466	0/0:13,0:13:24.05:0,24,256	0/0:13,0:13:11.16:0,11,293	0/0:22,0:22:57.08:0,57,594	0/0:23,0:23:63.17:0,63,697	0/0:28,1:30:49.16:0,49,770	0/0:20,0:20:42.09:0,42,447	0/1:5,9:14:29.49:218,0,29	1/1:8,26:34:65.96:573,66,0	1/1:2,22:24:56.99:495,57,0	0/0:18,0:18:39.56:0,40,423	0/0:26,0:26:63.13:0,63,672	0/0:20,0:20:45.12:0,45,498	0/0:28,0:28:69.16:0,69,747	0/0:16,0:16:36.07:0,36,375	0/0:28,0:30:62.78:0,63,636	0/0:7,0:7:18.04:0,18,191
chr10	13049014	.	G	GT	1972.28	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-7.444;DP=377;FS=2.762;HRun=7;HaplotypeScore=62.0967;InbreedingCoeff=0.9687;MQ=63.57;MQ0=0;MQRankSum=1.408;QD=23.76;ReadPosRankSum=-2.406;VQSLOD=2.8657;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:45.07:0,45,434	0/0:5,0:5:15.02:0,15,145	0/0:17,0:15:35.99:0,36,333	0/0:14,0:12:26.25:0,26,273	0/0:15,0:15:33.04:0,33,318	1/1:3,10:13:33.10:397,33,0	1/1:6,4:9:15.03:169,15,0	1/1:2,21:23:63.11:707,63,0	0/0:14,0:14:32.91:0,33,292	0/0:17,0:17:39.05:0,39,376	0/0:4,0:4:12:0,12,110	0/0:11,0:11:33.05:0,33,318	0/0:9,0:9:24.04:0,24,232	0/0:17,0:17:45.01:0,45,419	0/0:23,0:23:63.08:0,63,602	0/0:22,0:22:62.96:0,63,584	0/0:21,0:21:57:0,57,531	0/0:5,0:5:15.02:0,15,145	1/1:4,3:7:15.01:157,15,0	1/1:1,16:17:45.05:511,45,0	1/1:3,10:13:18.06:217,18,0	0/0:10,0:10:18.01:0,18,174	0/0:9,0:9:20.98:0,21,188	0/0:16,0:16:38.98:0,39,364	0/0:8,0:8:20.95:0,21,190	0/0:21,0:21:54.08:0,54,518	0/0:13,0:13:32.99:0,33,304	0/0:5,0:5:11.92:0,12,95
chr10	13049085	.	AGAG	A	4703.95	PASS	AC=50;AF=0.926;AN=54;BaseQRankSum=-0.331;DP=213;FS=31.059;HRun=0;HaplotypeScore=54.8972;InbreedingCoeff=0.3285;MQ=41.88;MQ0=31;MQRankSum=-1.771;QD=31.78;ReadPosRankSum=2.206;VQSLOD=3.1791;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,6:10:15.05:264,15,0	./.	0/0:21,0:1:1.25:0,1,3	0/0:44,0:4:9.03:0,9,179	1/1:0,5:5:9.03:158,9,0	1/1:0,5:5:12.04:211,12,0	1/1:0,10:9:18.06:317,18,0	1/1:3,5:7:6.02:106,6,0	1/1:0,4:4:12.04:211,12,0	1/1:1,5:4:12.04:212,12,0	1/1:0,3:2:6.02:106,6,0	1/1:3,3:5:3.01:53,3,0	1/1:0,2:2:6.02:106,6,0	1/1:2,2:4:3.01:53,3,0	1/1:2,1:3:3.01:53,3,0	1/1:1,10:11:24.08:423,24,0	1/1:1,3:4:6.02:106,6,0	1/1:0,2:2:6.02:106,6,0	1/1:3,5:6:6.02:106,6,0	1/1:1,6:6:12.04:211,12,0	1/1:2,2:4:3.01:53,3,0	1/1:1,7:8:21.07:370,21,0	1/1:1,6:6:9.03:159,9,0	1/1:0,7:6:15.05:264,15,0	1/1:0,4:2:6.02:106,6,0	1/1:1,10:11:30.10:529,30,0	1/1:0,5:5:12.04:211,12,0	1/1:0,4:4:12.04:212,12,0
chr10	13049231	.	TC	T	1514.54	PASS	AC=40;AF=1.000;AN=40;DP=238;FS=0.000;HRun=1;HaplotypeScore=16.3314;InbreedingCoeff=-0.0651;MQ=16.53;MQ0=160;QD=8.19;VQSLOD=0.6846;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	1/1:3,1:1:2.98:21,3,0	./.	./.	1/1:5,12:12:20.82:134,21,0	1/1:1,2:2:5.93:40,6,0	./.	1/1:14,1:1:3.01:35,3,0	./.	1/1:5,7:7:21.06:245,21,0	1/1:4,9:9:26.69:177,27,0	1/1:0,3:3:8.90:60,9,0	1/1:5,1:1:2.97:20,3,0	1/1:1,3:3:8.90:60,9,0	1/1:3,1:1:2.97:20,3,0	1/1:5,3:3:5.93:40,6,0	1/1:9,2:2:5.93:40,6,0	1/1:13,1:1:2.98:21,3,0	./.	1/1:5,6:6:17.79:118,18,0	./.	1/1:3,3:3:8.89:59,9,0	1/1:8,4:4:11.88:80,12,0	./.	1/1:3,8:8:23.67:155,24,0	1/1:8,5:5:14.96:143,15,0	1/1:9,2:2:5.94:41,6,0	1/1:3,4:4:11.90:83,12,0
chr10	13049645	.	T	TA	157.46	PASS	AB=0.889;AC=9;AF=0.643;AN=14;BaseQRankSum=1.377;DP=123;FS=5.643;HRun=0;HaplotypeScore=14.5441;MQ=8.67;MQ0=112;MQRankSum=0.382;QD=5.08;ReadPosRankSum=1.531;VQSLOD=1.8642;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	0/1:7,1:2:5.21:5,0,6	./.	./.	./.	./.	0/0:7,0:1:3.01:0,3,35	./.	./.	./.	./.	./.	./.	./.	./.	./.	1/1:8,2:2:6.01:62,6,0	./.	./.	0/0:5,0:1:2.94:0,3,18	./.	1/1:0,2:2:6.02:63,6,0	1/1:3,1:1:3.01:35,3,0	./.	1/1:5,2:2:6.02:74,6,0
chr10	13049650	.	TC	T	177.06	PASS	AC=10;AF=1.00;AN=10;DP=110;FS=0.000;HRun=1;HaplotypeScore=16.0400;MQ=7.82;MQ0=102;QD=5.90;VQSLOD=0.2659;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	1/1:6,1:1:3.01:34,3,0	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	1/1:8,2:2:6.01:56,6,0	./.	./.	./.	./.	1/1:0,2:2:6.01:57,6,0	1/1:3,1:1:3.01:32,3,0	./.	1/1:5,2:2:6.02:67,6,0
chr10	13051426	.	A	ATCCTGGGAAGGGCAGGAGGGTACT	96040.71	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=3.291;DP=642;FS=8.920;HRun=0;HaplotypeScore=341.6014;InbreedingCoeff=0.9697;MQ=73.42;MQ0=0;MQRankSum=-14.260;QD=177.52;ReadPosRankSum=3.925;VQSLOD=3.8595;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,129,6880	1/1:10,3:10:24.08:1725,24,0	0/0:23,0:23:33.80:0,34,2299	0/0:18,0:18:42.14:0,42,1488	1/1:12,2:10:24.08:1912,24,0	1/1:13,3:18:45.15:4087,45,0	1/1:39,0:40:99:7945,108,0	1/1:28,0:28:78.27:4093,78,0	1/1:19,4:30:71.96:5793,72,0	1/1:15,2:17:45.14:4235,45,0	1/1:5,1:4:9.03:680,9,0	1/1:28,4:33:87.30:6574,87,0	1/1:16,4:22:63.22:5637,63,0	1/1:20,2:27:57.20:4661,57,0	1/1:24,5:31:81.28:6368,81,0	1/1:24,7:34:93.32:7969,93,0	1/1:24,2:27:63.21:4773,63,0	1/1:20,3:24:54.19:4915,54,0	1/1:15,1:18:48.16:3362,48,0	1/1:12,0:9:15.05:732,15,0	1/1:26,2:32:51.17:3089,51,0	1/1:10,0:11:27.09:1657,27,0	1/1:14,0:9:15.05:360,15,0	1/1:22,0:22:48.16:2730,48,0	0/0:14,0:14:42.14:0,42,2134	1/1:18,5:25:66.18:5726,66,0	1/1:20,3:23:63.22:5330,63,0	1/1:9,1:9:15.05:1687,15,0
chr10	13051944	.	CGATATG	C	3967.59	PASS	AB=1.000;AC=18;AF=0.321;AN=56;BaseQRankSum=5.144;DP=589;FS=30.103;HRun=0;HaplotypeScore=166.5408;InbreedingCoeff=0.3308;MQ=77.26;MQ0=9;MQRankSum=-1.486;QD=17.33;ReadPosRankSum=7.735;VQSLOD=0.8628;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:84.23:0,84,2088	0/1:12,0:11:21.73:193,0,22	0/0:41,0:30:72.47:0,72,1713	0/0:36,0:25:66.40:0,66,1219	0/0:13,0:13:14.95:0,15,118	0/0:14,0:13:26.18:0,26,195	0/0:31,0:31:33.68:0,34,637	0/0:34,0:34:95.78:0,96,760	0/1:14,0:14:24.25:134,0,24	1/1:20,0:20:26.52:434,27,0	0/0:12,0:12:3:0,3,25	1/1:19,0:19:25.95:399,26,0	1/1:16,0:16:43.61:391,44,0	1/1:23,0:23:49.58:387,50,0	0/1:23,0:23:3.57:361,0,4	0/1:17,0:17:42.48:275,0,42	0/0:5,14:18:7.29:0,7,43	0/1:22,0:22:4.30:352,0,4	0/0:20,0:20:46.08:0,46,282	0/0:13,0:13:5.96:0,6,75	0/0:55,0:55:97.54:0,98,728	0/0:12,0:12:5.81:0,6,51	0/0:9,0:9:5.96:0,6,45	0/1:26,0:26:25.35:381,0,25	0/0:17,0:17:45.15:0,45,1306	0/1:14,0:14:62.92:225,0,63	1/1:18,0:18:32.13:379,32,0	0/1:5,0:5:28.01:58,0,28
chr10	13051950	.	GTATA	G	8024.16	PASS	AB=1.000;AC=32;AF=0.640;AN=50;BaseQRankSum=-2.389;DP=553;FS=7.799;HRun=0;HaplotypeScore=124.9496;InbreedingCoeff=0.7054;MQ=67.18;MQ0=10;MQRankSum=-1.344;QD=24.24;ReadPosRankSum=3.613;VQSLOD=3.8773;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:90.67:0,91,1561	1/1:10,0:9:27.06:413,27,0	0/0:32,0:21:59.99:0,60,1138	0/0:31,0:20:59.21:0,59,883	./.	0/0:11,0:11:4.34:0,4,24	0/1:28,0:28:38.78:39,0,69	0/0:30,0:30:7.31:0,7,41	1/1:14,0:14:26.64:333,27,0	1/1:19,0:19:54.12:856,54,0	./.	1/1:19,0:19:48.07:708,48,0	1/1:14,2:16:45.14:649,45,0	1/1:21,1:22:59.93:750,60,0	1/1:21,1:22:54.10:836,54,0	1/1:13,2:15:37.35:556,37,0	1/1:14,2:15:3.32:10,3,0	1/1:21,0:21:41.19:689,41,0	1/1:19,0:19:13.65:65,14,0	0/0:3,0:12:3:0,3,25	0/1:56,0:56:5:5,0,32	0/0:2,9:11:0:0,0,0	./.	1/1:23,1:24:50.67:789,51,0	0/0:22,0:22:54.18:0,54,1117	1/1:0,10:10:27.09:434,27,0	1/1:16,1:17:51.15:751,51,0	1/1:3,0:3:9.03:141,9,0
chr10	13051992	.	GTGTGTGTGTA	G	5122.42	PASS	AB=1.000;AC=43;AF=0.768;AN=56;BaseQRankSum=0.293;DP=530;FS=7.002;HRun=0;HaplotypeScore=149.6250;InbreedingCoeff=0.6280;MQ=47.48;MQ0=18;MQRankSum=3.192;QD=13.44;ReadPosRankSum=0.020;VQSLOD=3.4759;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:44:88.91:0,89,2483	1/1:8,0:7:5.34:46,5,0	0/0:21,0:6:17.89:0,18,137	0/0:29,0:15:41.44:0,41,302	1/1:9,0:9:20.02:175,20,0	0/1:22,0:20:0.13:99,0,0	0/0:33,0:32:1.83:0,2,5	1/1:19,0:18:44.68:338,45,0	1/1:17,0:17:23.98:207,24,0	0/1:18,0:18:55.28:135,0,55	1/1:7,2:8:5.95:44,6,0	1/1:28,0:27:43.33:379,43,0	1/1:17,2:19:26.52:315,27,0	1/1:16,1:17:30.36:334,30,0	1/1:12,1:13:19.99:206,20,0	1/1:16,2:18:36:438,36,0	1/1:25,2:25:28:252,28,0	0/1:19,0:19:99:318,0,101	1/1:5,0:4:8.98:72,9,0	1/1:6,0:6:8.99:75,9,0	1/1:41,0:40:44.91:375,45,0	1/1:11,1:11:11.94:102,12,0	1/1:14,0:13:17.63:153,18,0	1/1:22,1:22:35.64:358,36,0	0/0:21,0:21:45.59:0,46,1474	1/1:14,0:14:28.25:264,28,0	1/1:11,0:11:19.68:229,20,0	1/1:11,0:9:20.93:210,21,0
chr10	13052000	.	GTA	G	4600.53	PASS	AB=1.000;AC=49;AF=0.875;AN=56;BaseQRankSum=-0.982;DP=470;FS=13.509;HRun=0;HaplotypeScore=82.0610;InbreedingCoeff=0.5036;MQ=48.57;MQ0=17;MQRankSum=2.230;QD=10.90;ReadPosRankSum=1.285;VQSLOD=3.5284;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:44,0:43:0.25:0,0,806	1/1:7,0:7:11.95:92,12,0	0/0:21,0:7:20.89:0,21,167	0/0:27,0:15:41.41:0,41,302	1/1:9,0:9:25.99:201,26,0	1/1:20,0:18:8.65:50,9,0	1/1:27,0:26:2.27:22,2,0	1/1:1,19:19:56.52:426,57,0	1/1:14,0:14:14:182,14,0	1/1:11,0:11:27.18:185,27,0	1/1:7,0:6:5.95:44,6,0	1/1:23,0:23:28.45:339,28,0	1/1:12,0:12:27.88:206,28,0	1/1:18,0:18:19.66:233,20,0	1/1:12,0:12:21.73:178,22,0	1/1:14,0:14:33.84:276,34,0	1/1:26,0:23:9.92:179,10,0	0/1:19,0:19:29.27:242,0,29	1/1:1,4:4:11.97:95,12,0	1/1:6,0:6:11.98:99,12,0	1/1:35,0:35:44.82:359,45,0	1/1:10,0:9:14.91:119,15,0	1/1:12,0:11:17.97:148,18,0	1/1:22,0:21:35.55:284,36,0	0/1:18,0:18:23.90:24,0,413	1/1:11,0:11:32.95:278,33,0	1/1:9,0:9:20.96:152,21,0	1/1:11,0:9:23.93:189,24,0
chr10	13052012	.	G	GGG	43.21	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=2.318;DP=518;FS=7.941;HRun=0;HaplotypeScore=107.2863;InbreedingCoeff=0.5901;MQ=59.33;MQ0=9;MQRankSum=1.205;QD=0.41;ReadPosRankSum=-2.968;VQSLOD=0.5979;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:39:91.51:0,92,1328	0/0:9,0:9:18.02:0,18,226	0/0:26,0:12:32.77:0,33,442	0/0:37,0:25:35.71:0,36,653	0/0:13,0:13:35.98:0,36,447	1/1:21,0:20:3.85:22,4,0	1/1:8,20:29:8.41:82,8,0	0/0:24,0:24:3.31:0,3,22	0/0:14,0:14:30.07:0,30,413	0/0:11,0:11:29.90:0,30,345	0/0:6,0:6:9.03:0,9,126	0/0:24,0:24:54.59:0,55,708	0/0:13,0:13:27.09:0,27,380	0/0:21,0:21:42.06:0,42,529	0/0:15,0:15:33.53:0,34,417	0/0:18,0:18:42.13:0,42,578	0/0:20,0:18:35.87:0,36,461	0/0:18,0:18:48.04:0,48,571	0/1:12,0:12:14.61:17,0,15	0/0:10,0:10:0.82:0,1,21	1/1:43,0:43:3.77:43,4,0	0/0:12,0:11:20.85:0,21,212	0/0:11,0:10:21.07:0,21,306	0/0:23,0:22:42.04:0,42,544	0/0:13,0:13:36.09:0,36,504	0/0:12,0:12:36.01:0,36,494	0/0:12,0:12:24.08:0,24,339	0/0:11,0:11:30.05:0,30,400
chr10	13052583	.	T	TA	1882.76	PASS	AB=1.000;AC=20;AF=0.357;AN=56;BaseQRankSum=-8.957;DP=312;FS=3.318;HRun=9;HaplotypeScore=50.5290;InbreedingCoeff=0.3604;MQ=67.90;MQ0=2;MQRankSum=0.296;QD=10.70;ReadPosRankSum=-5.011;VQSLOD=1.0949;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:59.57:0,60,490	0/1:4,0:4:6.31:38,0,6	0/0:16,0:4:7.05:0,7,39	0/1:12,0:8:0.01:0,0,0	0/1:10,0:10:17.88:29,0,18	1/1:0,15:15:39.11:429,39,0	1/1:0,4:4:6.02:66,6,0	1/1:5,23:28:72.02:747,72,0	0/0:5,0:5:3.35:0,3,16	0/1:16,0:16:22:30,0,22	0/0:8,0:8:13.31:0,13,43	0/0:2,0:2:3.11:0,3,7	0/0:7,0:7:11.07:0,11,29	0/1:7,0:7:4.45:15,0,4	0/0:7,0:7:9.25:0,9,29	0/0:6,0:6:8.60:0,9,32	0/1:33,0:32:12.81:13,0,87	0/0:25,0:23:18.28:0,18,102	1/1:2,13:15:38.94:378,39,0	1/1:2,3:5:9.02:99,9,0	1/1:2,7:9:12.03:132,12,0	0/0:1,0:1:2.04:0,2,6	0/0:4,0:4:6.11:0,6,17	0/0:4,0:4:5.15:0,5,13	0/0:10,0:10:26.99:0,27,234	0/1:10,0:10:2.65:57,0,3	0/1:8,0:8:16.87:25,0,17	0/0:14,0:14:24.30:0,24,71
chr10	13054380	.	G	GGTGTGGTGTGGTGTGTGTGTGTGT	14811.84	PASS	AB=0.706;AC=41;AF=0.732;AN=56;BaseQRankSum=-1.353;DP=834;FS=1.382;HRun=0;HaplotypeScore=324.1214;InbreedingCoeff=0.4629;MQ=50.59;MQ0=50;MQRankSum=-6.571;QD=26.40;ReadPosRankSum=-0.570;VQSLOD=2.6226;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:40:84.27:0,84,3084	1/1:9,0:13:18.05:329,18,0	0/0:84,0:24:8.70:0,9,657	0/0:106,0:40:55.97:0,56,1400	1/1:4,0:32:9.03:358,9,0	0/1:5,0:22:99:161,0,641	0/0:1,0:21:25.80:0,26,776	0/1:41,0:36:49.91:722,0,50	1/1:5,0:19:15.10:495,15,0	1/1:20,0:27:57.73:1648,58,0	1/1:2,0:12:6.02:273,6,0	1/1:5,8:25:15.52:863,16,0	1/1:16,0:19:36.12:1226,36,0	1/1:20,0:27:45.31:1408,45,0	1/1:24,0:30:48.95:1042,49,0	1/1:3,0:31:3.95:240,4,0	1/1:12,0:28:21.03:788,21,0	0/1:3,0:15:7.91:238,0,8	1/1:13,0:12:22.26:248,22,0	0/1:3,0:16:17.78:143,0,18	0/1:39,0:33:99:159,0,117	1/1:2,0:19:9.03:477,9,0	1/1:16,0:20:15:210,15,0	1/1:20,0:28:4.64:349,5,0	0/0:18,0:21:58.92:0,59,2900	1/1:24,0:31:71.27:2090,71,0	1/1:20,0:22:40.49:1012,40,0	1/1:6,0:6:12.04:332,12,0
chr10	13054384	.	T	TG	3973.50	PASS	AB=0.841;AC=24;AF=0.429;AN=56;BaseQRankSum=3.289;DP=789;FS=13.402;HRun=1;HaplotypeScore=127.9712;InbreedingCoeff=-0.3897;MQ=45.12;MQ0=49;MQRankSum=-5.333;QD=7.92;ReadPosRankSum=1.650;VQSLOD=-0.2092;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:92.81:0,93,1063	0/1:7,3:10:7.20:131,0,7	0/0:79,0:19:40.67:0,41,534	0/0:102,0:36:83.93:0,84,1052	1/1:20,1:21:2.69:26,3,0	0/0:21,0:20:42.13:0,42,501	0/0:21,0:20:30.07:0,30,344	0/1:36,8:37:99:393,0,443	0/1:20,0:20:11:38,0,11	0/1:26,4:28:99:546,0,147	0/1:13,0:13:14.08:14,0,87	0/1:12,0:11:5.03:5,0,54	0/1:8,11:20:22.72:324,0,23	0/1:19,10:26:99:269,0,134	0/1:19,12:31:8.90:428,0,9	1/1:29,0:28:2.80:13,3,0	0/1:27,0:25:1.25:1,0,163	0/1:11,1:12:3.39:49,0,3	0/1:12,0:11:99:129,0,142	0/1:19,2:19:97.01:97,0,149	0/1:34,10:34:99:289,0,199	0/1:18,0:17:17.93:18,0,31	0/1:11,5:17:26.41:85,0,26	0/1:22,8:29:32.75:33,0,66	0/0:21,0:21:58.81:0,59,702	0/1:21,11:28:99:520,0,178	0/1:8,14:22:21.89:492,0,22	0/1:4,2:6:3.17:71,0,3
chr10	13054385	.	GT	G	2827.53	PASS	AB=0.912;AC=17;AF=0.304;AN=56;BaseQRankSum=2.546;DP=785;FS=12.443;HRun=1;HaplotypeScore=130.7322;InbreedingCoeff=-0.4481;MQ=45.04;MQ0=49;MQRankSum=-4.609;QD=6.95;ReadPosRankSum=-0.682;VQSLOD=-0.5485;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:88.93:0,89,1214	0/1:9,0:9:27.96:133,0,28	0/0:77,0:17:46.39:0,46,602	0/0:103,0:37:86.94:0,87,1172	0/1:21,0:21:6.83:8,0,7	0/0:21,0:20:42.14:0,42,658	0/0:21,0:20:33.09:0,33,488	0/1:34,9:36:99:269,0,752	0/1:21,0:20:7.11:7,0,79	0/1:19,11:28:99:477,0,286	0/0:13,0:13:0.94:0,1,118	0/0:11,1:11:7.63:0,8,106	0/1:18,2:20:99:218,0,107	0/1:25,3:25:99:252,0,260	0/1:25,6:31:48.67:400,0,49	0/0:28,1:28:2.80:0,3,13	0/0:28,0:26:20.53:0,21,270	0/0:11,0:11:3.30:0,3,21	0/1:9,3:11:99:114,0,243	0/1:20,0:18:20.81:21,0,315	0/1:34,12:36:99:217,0,410	0/1:18,0:17:14.66:15,0,39	0/1:14,3:17:83.48:83,0,87	0/1:31,0:29:31.81:32,0,88	0/0:21,0:21:54.85:0,55,786	0/1:28,4:28:99:280,0,406	0/1:21,1:22:23.21:384,0,23	0/1:6,0:6:29.09:71,0,29
chr10	13057019	.	AT	A	1139.35	PASS	AB=0.781;AC=44;AF=0.786;AN=56;BaseQRankSum=0.669;DP=355;FS=2.624;HRun=16;HaplotypeScore=49.8533;InbreedingCoeff=0.2572;MQ=61.03;MQ0=7;MQRankSum=0.082;QD=3.82;ReadPosRankSum=2.791;VQSLOD=-0.0814;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,3:33:2.69:0,3,324	1/1:4,0:3:2.88:16,3,0	0/1:15,0:12:13.76:14,0,18	0/0:8,0:6:2.97:0,3,20	0/0:2,0:3:2.96:0,3,19	1/1:7,4:10:5.75:36,6,0	0/1:6,4:14:4.38:68,0,4	1/1:13,1:25:20.54:58,21,0	1/1:3,3:5:2.92:18,3,0	0/1:6,4:11:13.42:42,0,13	1/1:2,2:4:2.81:18,3,0	1/1:6,5:11:8.76:54,9,0	1/1:2,7:9:14.68:90,15,0	1/1:5,5:10:8.73:54,9,0	0/1:9,3:12:13.72:36,0,14	1/1:7,7:15:1.91:81,2,0	1/1:9,9:18:5.65:92,6,0	1/1:12,4:18:27.37:150,27,0	1/1:7,0:14:14.16:41,14,0	1/1:3,0:10:6.02:18,6,0	1/1:14,0:19:8.52:24,9,0	1/1:4,4:8:7.76:42,8,0	1/1:3,2:5:5.56:35,6,0	1/1:10,9:18:17.30:106,17,0	0/0:12,0:12:24.80:0,25,193	1/1:10,6:16:14.44:87,14,0	1/1:5,3:8:5.84:36,6,0	1/1:5,5:9:12.14:73,12,0
chr10	13057198	.	ATACTT	A	362.60	PASS	AB=0.884;AC=6;AF=0.115;AN=52;BaseQRankSum=4.447;DP=185;FS=2.796;HRun=0;HaplotypeScore=65.6688;InbreedingCoeff=0.2020;MQ=75.83;MQ0=2;MQRankSum=-3.841;QD=8.84;ReadPosRankSum=-1.113;VQSLOD=1.7838;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:30.10:0,30,957	./.	0/0:13,0:9:17:0,17,325	0/0:20,0:9:14.84:0,15,278	0/0:1,0:1:3.01:0,3,92	0/1:6,0:6:96.28:143,0,96	1/1:1,0:1:3:29,3,0	0/1:23,10:26:99:267,0,828	0/0:1,0:1:3.01:0,3,92	0/0:4,0:4:12.04:0,12,211	0/0:3,0:3:9.02:0,9,158	0/0:4,0:4:12.04:0,12,322	0/0:3,0:3:8.70:0,9,193	./.	0/0:3,0:3:9.03:0,9,215	0/0:3,0:3:8.84:0,9,93	0/0:27,0:27:81.25:0,81,1850	0/0:18,0:18:50.96:0,51,1266	0/0:7,0:7:21.07:0,21,432	0/0:2,0:2:6.02:0,6,161	1/1:1,0:1:3.01:34,3,0	0/0:3,0:3:6.02:0,6,142	0/0:1,0:1:3:0,3,29	0/0:2,0:2:3.48:0,3,93	0/0:1,0:1:3.01:0,3,74	0/0:5,0:5:9.26:0,9,249	0/0:5,0:5:15.05:0,15,360	0/0:8,0:8:24.08:0,24,634
chr10	13057202	.	TTATA	T	1946.60	PASS	AB=0.972;AC=28;AF=0.636;AN=44;BaseQRankSum=-1.950;DP=180;FS=2.532;HRun=0;HaplotypeScore=59.0774;InbreedingCoeff=0.2760;MQ=75.84;MQ0=2;MQRankSum=1.856;QD=15.21;ReadPosRankSum=3.711;VQSLOD=2.6394;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:24.08:0,24,544	./.	0/0:13,0:9:13.73:0,14,206	0/0:19,0:9:15.10:0,15,224	./.	0/0:5,0:5:8.06:0,8,78	0/0:1,0:1:2.99:0,3,24	1/1:29,2:24:20.58:648,21,0	./.	1/1:1,3:4:8.39:118,8,0	1/1:2,0:2:4.26:45,4,0	0/1:4,0:4:29.97:30,0,40	1/1:3,0:3:5.81:61,6,0	./.	1/1:3,0:3:4.57:57,5,0	0/1:2,0:2:10.16:34,0,10	1/1:23,3:26:34.93:497,35,0	0/1:17,0:17:21.53:132,0,22	1/1:1,6:7:14.95:197,15,0	./.	0/1:2,0:2:2.63:20,0,3	1/1:2,1:3:3.47:10,3,0	1/1:1,0:1:3.01:52,3,0	1/1:2,1:3:1.60:3,2,0	./.	1/1:6,0:6:8.79:39,9,0	0/1:4,1:5:1.24:79,0,1	0/1:9,0:9:12.46:71,0,12
chr10	13057205	.	T	TA	2297.19	PASS	AB=0.833;AC=35;AF=0.761;AN=46;BaseQRankSum=-2.938;DP=179;FS=4.127;HRun=1;HaplotypeScore=54.3120;InbreedingCoeff=0.5877;MQ=75.54;MQ0=2;MQRankSum=0.145;QD=16.89;ReadPosRankSum=2.029;VQSLOD=4.0276;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:8:24.08:0,24,311	./.	0/0:13,0:8:13.28:0,13,148	0/0:20,0:9:15.24:0,15,163	./.	0/1:4,1:5:0.61:1,0,14	0/0:1,0:1:2.68:0,3,11	1/1:26,6:25:0.44:254,0,0	./.	1/1:4,0:4:8.81:80,9,0	1/1:2,0:2:5.99:56,6,0	1/1:1,3:4:11.36:57,11,0	1/1:3,0:3:8.70:80,9,0	./.	1/1:2,0:2:5.69:46,6,0	1/1:1,1:2:5.85:54,6,0	1/1:25,1:26:76.11:676,76,0	1/1:14,3:17:47.67:434,48,0	1/1:6,1:7:17.58:112,18,0	0/0:1,0:1:2.04:0,2,6	1/1:1,1:2:5.75:46,6,0	1/1:3,0:3:6.02:68,6,0	1/1:1,0:1:2.60:10,3,0	1/1:2,1:3:2.56:33,3,0	./.	1/1:4,2:6:16.20:161,16,0	1/1:4,2:6:14.32:110,14,0	1/1:7,4:11:23.40:165,23,0
chr10	13057206	.	ATAT	A	1249.05	PASS	AB=1.000;AC=36;AF=0.783;AN=46;BaseQRankSum=1.749;DP=178;FS=5.909;HRun=0;HaplotypeScore=63.9418;InbreedingCoeff=0.3961;MQ=75.72;MQ0=2;MQRankSum=2.330;QD=9.39;ReadPosRankSum=0.827;VQSLOD=2.0884;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:8:24.07:0,24,466	./.	0/0:13,0:8:6.48:0,6,192	0/0:19,0:9:1.42:0,1,208	./.	0/1:5,0:5:5.98:38,0,6	1/1:1,0:1:2.22:7,2,0	1/1:21,10:25:49.92:539,50,0	./.	1/1:4,0:4:8.72:50,9,0	1/1:1,0:2:4.87:17,5,0	0/0:3,0:4:5.12:0,5,30	1/1:3,0:3:7.99:34,8,0	./.	1/1:2,0:2:5.50:25,5,0	1/1:2,0:2:1.72:5,2,0	1/1:26,0:26:58.85:275,59,0	1/1:17,0:17:18.22:121,18,0	1/1:7,0:7:9.90:82,10,0	1/1:1,0:1:1.25:3,1,0	1/1:2,0:2:5.50:43,6,0	1/1:3,0:3:4.99:18,5,0	1/1:1,0:1:2.88:15,3,0	1/1:3,0:3:2.84:9,3,0	./.	1/1:5,0:5:5.28:37,5,0	1/1:6,0:6:2.65:60,3,0	0/1:11,0:11:4.34:4,0,34
chr10	13057208	.	AT	A	2527.73	PASS	AB=1.000;AC=41;AF=0.854;AN=48;BaseQRankSum=2.306;DP=181;FS=6.492;HRun=1;HaplotypeScore=48.8890;InbreedingCoeff=0.4742;MQ=75.56;MQ0=2;MQRankSum=-2.255;QD=16.85;ReadPosRankSum=4.351;VQSLOD=3.8550;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:24.07:0,24,360	./.	0/1:13,0:8:5.47:5,0,138	0/0:20,0:9:18.37:0,18,235	./.	1/1:0,5:5:13.59:167,14,0	1/1:0,1:1:3.01:42,3,0	1/1:22,9:24:62.86:573,63,0	./.	1/1:4,0:4:8.28:57,8,0	1/1:2,0:2:5.38:39,5,0	1/1:1,3:4:7.69:30,8,0	1/1:3,0:3:8.51:71,9,0	./.	1/1:2,0:2:5.50:40,6,0	1/1:1,1:2:0.63:8,1,0	1/1:25,1:26:71.08:588,71,0	1/1:14,3:17:44.26:369,44,0	1/1:8,1:9:15.59:111,16,0	1/1:1,0:1:2.96:19,3,0	1/1:1,1:2:6.01:60,6,0	1/1:3,0:3:6.01:62,6,0	1/1:1,0:1:2.37:8,2,0	1/1:2,1:3:2.70:30,3,0	0/0:1,0:1:3.01:0,3,36	1/1:2,3:5:14.87:143,15,0	1/1:3,3:6:16.99:135,17,0	1/1:3,7:10:19.74:105,20,0
chr10	13057447	.	G	GA	3506.67	PASS	AB=0.891;AC=38;AF=0.679;AN=56;BaseQRankSum=1.939;DP=456;FS=3.744;HRun=14;HaplotypeScore=104.6642;InbreedingCoeff=0.5800;MQ=56.71;MQ0=8;MQRankSum=-5.486;QD=10.28;ReadPosRankSum=-0.759;VQSLOD=2.8246;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:30:59.19:0,59,363	0/1:2,0:2:11.82:12,0,13	1/1:29,2:8:5.14:58,5,0	0/1:35,1:16:11.52:12,0,25	1/1:8,5:13:14.77:112,15,0	0/0:6,0:7:10.90:0,11,64	0/0:9,0:14:22.85:0,23,120	0/0:24,0:27:44.21:0,44,259	1/1:7,3:11:1.66:123,2,0	1/1:16,3:21:6.67:188,7,0	1/1:5,3:10:9.43:72,9,0	1/1:13,9:21:40.72:330,41,0	1/1:9,7:17:29.25:269,29,0	1/1:7,6:13:22.73:195,23,0	1/1:10,10:21:28.08:292,28,0	0/1:7,10:18:7.16:287,0,7	1/1:15,12:31:28.30:446,28,0	1/1:7,10:17:10.72:212,11,0	0/0:16,0:17:11.44:0,11,119	0/1:9,0:9:3.32:3,0,26	0/0:10,0:9:5.45:0,5,38	1/1:4,2:7:5.96:53,6,0	1/1:3,5:8:15.88:134,16,0	1/1:6,4:10:16.99:131,17,0	0/0:9,0:10:19.65:0,20,121	1/1:17,6:23:41.83:341,42,0	1/1:10,4:14:4.67:153,5,0	1/1:1,2:4:11.76:84,12,0
chr10	13057472	.	T	TAAAACAAAAC	17196.38	PASS	AC=46;AF=0.852;AN=54;BaseQRankSum=-2.013;DP=572;FS=17.347;HRun=0;HaplotypeScore=150.4856;InbreedingCoeff=0.8056;MQ=52.11;MQ0=10;MQRankSum=-7.305;QD=40.27;ReadPosRankSum=-1.982;VQSLOD=3.2509;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:57.18:0,57,1595	./.	0/0:39,0:13:14.55:0,15,165	0/0:57,0:24:5.25:0,5,204	1/1:10,4:15:12.02:384,12,0	1/1:6,4:11:15.05:624,15,0	1/1:11,1:12:12.03:357,12,0	1/1:39,0:39:39.58:1051,40,0	1/1:8,4:17:15.05:628,15,0	1/1:11,14:26:42.14:1877,42,0	1/1:3,3:8:12.04:538,12,0	1/1:15,8:27:30.10:1381,30,0	1/1:11,5:17:12.04:560,12,0	1/1:7,4:12:18.06:788,18,0	1/1:17,6:32:12.04:500,12,0	1/1:12,8:22:27.09:1276,27,0	1/1:23,5:33:18.05:776,18,0	1/1:12,3:17:12.04:574,12,0	1/1:13,9:27:57.20:1895,57,0	1/1:6,0:6:12.03:279,12,0	1/1:7,5:15:12.04:556,12,0	1/1:4,6:15:21.06:585,21,0	1/1:7,2:12:12.04:375,12,0	1/1:7,2:12:3.01:92,3,0	0/0:13,0:13:27.08:0,27,731	1/1:13,6:20:21.06:928,21,0	1/1:8,11:20:21.07:954,21,0	1/1:4,2:9:6.02:217,6,0
chr10	13059431	.	AT	A	481.58	PASS	AB=0.957;AC=6;AF=0.107;AN=56;BaseQRankSum=5.219;DP=574;FS=7.089;HRun=13;HaplotypeScore=59.8667;InbreedingCoeff=0.6988;MQ=70.12;MQ0=1;MQRankSum=1.025;QD=6.42;ReadPosRankSum=1.073;VQSLOD=2.0074;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:27:47.50:0,48,433	0/0:9,0:9:27.02:0,27,253	0/0:24,0:15:12.86:0,13,176	0/1:13,0:9:0:0,0,0	0/0:31,1:32:53.12:0,53,656	1/1:4,19:24:7.25:285,7,0	1/1:2,15:17:41.75:306,42,0	0/0:40,3:44:30.07:0,30,721	0/0:12,0:12:29.99:0,30,281	0/0:33,0:34:71.94:0,72,677	0/0:18,0:20:41.72:0,42,365	0/0:25,0:25:56.88:0,57,518	0/0:18,0:21:35.88:0,36,329	0/0:14,1:16:19.98:0,20,334	0/0:20,0:20:50.91:0,51,476	0/0:15,1:17:23:0,23,372	0/0:29,1:30:47.15:0,47,605	0/0:6,0:6:7.29:0,7,136	0/0:17,0:16:42.07:0,42,408	0/0:21,2:23:29.16:0,29,441	0/0:12,0:12:18.03:0,18,175	0/0:16,0:16:33.05:0,33,321	0/0:15,0:15:30.03:0,30,283	0/0:14,0:14:39.03:0,39,372	0/0:30,0:30:75.10:0,75,721	0/1:19,2:21:7.62:8,0,256	0/0:14,0:16:32.09:0,32,270	0/0:15,1:18:19.98:0,20,333
chr10	13059576	.	C	CTGTGTGTG	443.64	PASS	AB=0.852;AC=9;AF=0.167;AN=54;BaseQRankSum=-1.691;DP=640;FS=0.972;HRun=0;HaplotypeScore=179.2907;InbreedingCoeff=0.2477;MQ=65.13;MQ0=18;MQRankSum=-0.050;QD=2.42;ReadPosRankSum=-2.518;VQSLOD=2.4937;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:40:29.87:0,30,659	0/0:3,0:8:5.49:0,5,31	./.	0/1:45,0:12:0:0,0,0	0/0:13,0:18:11.28:0,11,122	1/1:23,6:32:3.01:122,3,0	1/1:34,0:33:8.45:239,8,0	0/0:19,0:27:3.01:0,3,55	0/0:7,0:14:11.61:0,12,63	0/1:18,0:23:52.22:84,0,52	0/0:6,0:13:14.62:0,15,138	0/0:15,0:23:6.24:0,6,32	0/0:12,0:24:19.29:0,19,109	0/1:16,0:19:45.53:46,0,245	0/0:13,0:20:8.44:0,8,47	0/0:15,0:27:26.81:0,27,260	0/0:12,0:25:11.97:0,12,268	0/0:4,0:13:17.52:0,18,154	0/0:12,0:19:15.05:0,15,279	0/0:5,0:20:8.61:0,9,122	0/0:27,0:38:5.40:0,5,62	0/0:4,0:15:11.37:0,11,63	0/0:9,0:12:8.92:0,9,166	0/0:21,0:38:21.83:0,22,301	0/0:12,0:15:11.63:0,12,215	0/1:8,0:14:4.56:62,0,5	0/1:13,0:15:18.44:18,0,69	0/0:3,0:5:5.91:0,6,72
chr10	13062832	.	AT	A	6513.16	PASS	AB=0.793;AC=40;AF=0.714;AN=56;BaseQRankSum=3.799;DP=492;FS=5.311;HRun=11;HaplotypeScore=71.9103;InbreedingCoeff=0.7663;MQ=65.62;MQ0=1;MQRankSum=0.903;QD=17.89;ReadPosRankSum=4.798;VQSLOD=5.8387;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:37:93.01:0,93,958	1/1:1,5:6:14.98:123,15,0	0/1:10,0:10:7.62:8,0,99	0/0:5,0:4:3.47:0,3,28	1/1:5,14:19:6.95:264,7,0	1/1:2,14:16:13.28:313,13,0	1/1:3,22:25:59.92:493,60,0	0/0:21,1:22:23.39:0,23,424	1/1:3,15:18:38.93:320,39,0	1/1:0,14:14:41.95:345,42,0	1/1:0,6:7:20.02:154,20,0	1/1:7,22:30:61.89:498,62,0	1/1:4,14:18:38.91:320,39,0	1/1:2,16:18:44.94:369,45,0	1/1:2,13:15:38.95:320,39,0	1/1:3,22:25:62.92:517,63,0	1/1:3,24:27:47.07:498,47,0	1/1:6,17:24:46.97:375,47,0	0/0:20,1:22:20.29:0,20,399	0/0:3,0:3:6.02:0,6,64	0/0:22,2:25:13.66:0,14,528	1/1:0,19:18:44.93:369,45,0	1/1:1,7:8:14.96:123,15,0	1/1:3,19:22:56.93:468,57,0	0/0:13,0:13:33.07:0,33,342	0/1:7,17:23:10.04:340,0,10	1/1:3,9:12:20.80:172,21,0	1/1:1,6:7:14.98:123,15,0
chr10	13063245	.	A	AG	1124.38	PASS	AB=0.500;AC=39;AF=0.848;AN=46;BaseQRankSum=0.901;DP=116;FS=0.000;HRun=1;HaplotypeScore=85.1527;InbreedingCoeff=0.4518;MQ=55.06;MQ0=0;MQRankSum=-2.418;QD=10.51;ReadPosRankSum=0.427;VQSLOD=1.2666;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,4:4:5.72:29,6,0	./.	0/0:1,0:1:3.01:0,3,39	0/0:3,0:3:3.01:0,3,34	0/0:0,2:2:0:0,0,0	./.	1/1:2,10:12:22.57:110,23,0	1/1:1,2:3:5.90:37,6,0	1/1:3,2:5:11.53:82,12,0	1/1:0,4:4:6.82:43,7,0	0/1:0,1:1:0:0,0,0	1/1:0,5:5:14.24:72,14,0	1/1:2,2:4:11.23:77,11,0	1/1:0,5:5:13.89:64,14,0	1/1:0,1:1:2.84:14,3,0	1/1:2,0:2:2.80:13,3,0	1/1:2,5:7:11.62:83,12,0	1/1:2,6:8:17.83:129,18,0	1/1:3,3:6:14.83:101,15,0	1/1:0,1:1:2.04:6,2,0	1/1:4,9:13:10.94:54,11,0	./.	./.	1/1:2,6:8:16.57:75,17,0	1/1:3,3:6:11.34:58,11,0	1/1:0,9:9:25.65:149,26,0	./.	1/1:0,3:3:5.83:33,6,0
chr10	13063248	.	GA	G	725.88	PASS	AB=0.500;AC=39;AF=0.848;AN=46;BaseQRankSum=-0.352;DP=91;FS=0.000;HRun=1;HaplotypeScore=77.4310;InbreedingCoeff=0.4025;MQ=53.89;MQ0=0;MQRankSum=-1.890;QD=8.54;ReadPosRankSum=1.447;VQSLOD=0.9569;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,4:4:5.42:23,5,0	./.	0/0:1,0:1:3.01:0,3,48	0/0:2,0:2:3:0,3,27	0/1:0,2:2:0:0,0,0	./.	1/1:0,10:10:18.45:75,18,0	1/1:0,2:2:3.35:15,3,0	1/1:0,2:2:5.36:22,5,0	1/1:0,4:4:5.14:34,5,0	1/1:0,1:1:2.97:20,3,0	1/1:0,5:5:13.47:57,13,0	1/1:0,2:2:4.72:16,5,0	1/1:0,5:5:12.80:49,13,0	1/1:0,1:1:2.68:11,3,0	./.	1/1:0,5:5:8.22:37,8,0	1/1:0,6:6:17.61:111,18,0	1/1:0,3:3:8.75:50,9,0	1/1:0,1:1:1.25:3,1,0	1/1:0,9:9:10.54:48,11,0	0/0:1,1:2:1.55:0,2,4	./.	1/1:0,6:6:10.50:63,10,0	1/1:1,3:4:8.41:46,8,0	1/1:1,9:10:25.02:126,25,0	./.	1/1:0,3:3:5.64:27,6,0
chr10	13063431	.	GT	G	136.80	PASS	AC=12;AF=0.667;AN=18;BaseQRankSum=-0.274;DP=43;FS=3.090;HRun=1;HaplotypeScore=9.7118;MQ=59.38;MQ0=12;MQRankSum=-2.282;QD=5.26;ReadPosRankSum=1.734;VQSLOD=0.6978;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,2:2:0.89:2,1,0	./.	1/1:6,0:1:2.99:24,3,0	0/0:5,0:2:5.95:0,6,66	./.	./.	./.	./.	./.	1/1:0,5:5:12.03:146,12,0	./.	1/1:1,1:1:0.89:2,1,0	./.	0/0:0,3:3:0:0,0,0	./.	./.	./.	./.	./.	./.	./.	./.	0/0:0,1:1:0.47:0,0,1	./.	1/1:0,7:7:3.08:8,3,0	./.	./.	1/1:1,2:2:4.56:33,5,0
chr10	13063439	.	GT	G	170.84	PASS	AC=12;AF=0.667;AN=18;BaseQRankSum=0.667;DP=51;FS=0.000;HRun=1;HaplotypeScore=9.2821;MQ=74.09;MQ0=19;MQRankSum=-2.243;QD=7.77;ReadPosRankSum=0.910;VQSLOD=0.6233;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,2:2:0.89:2,1,0	./.	0/0:9,0:1:3.01:0,3,30	0/0:8,0:3:5.96:0,6,43	./.	./.	./.	./.	./.	1/1:0,5:5:12.03:141,12,0	./.	0/0:1,1:1:1.55:0,2,4	./.	1/1:0,3:3:1.82:7,2,0	./.	./.	./.	./.	./.	./.	./.	./.	1/1:0,1:1:2.68:11,3,0	./.	1/1:0,7:7:9.09:50,9,0	./.	./.	1/1:1,2:2:5.97:47,6,0
chr10	13065090	.	ATTG	A	1938.88	PASS	AB=0.976;AC=25;AF=0.446;AN=56;BaseQRankSum=12.199;DP=581;FS=46.471;HRun=0;HaplotypeScore=113.7612;InbreedingCoeff=-0.6443;MQ=73.17;MQ0=4;MQRankSum=-1.169;QD=4.04;ReadPosRankSum=10.878;VQSLOD=-0.5635;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:33.09:0,33,537	0/1:6,0:6:17.25:17,0,24	0/0:40,0:18:45.75:0,46,419	0/0:30,0:15:15.50:0,15,198	0/1:22,1:23:99:131,0,125	0/1:32,1:33:99:195,0,166	0/1:8,0:8:9.76:10,0,84	0/1:30,0:30:15.12:15,0,324	0/1:13,0:13:35.50:46,0,35	0/1:19,1:20:54.63:55,0,141	0/1:24,0:25:84.84:130,0,85	0/1:25,2:27:82.50:192,0,82	0/1:19,0:19:46.17:46,0,143	0/1:15,0:15:47.59:48,0,69	1/1:18,2:20:19.01:201,19,0	0/1:17,1:18:39.49:97,0,39	0/1:32,1:33:99:181,0,102	0/1:16,0:16:42.10:42,0,106	0/1:17,0:17:25.35:25,0,136	0/1:27,1:28:99:129,0,142	0/1:7,1:7:23.63:57,0,24	0/1:17,0:17:56.72:73,0,57	0/1:21,0:21:46.91:122,0,47	0/1:17,0:17:55.52:56,0,127	0/0:17,0:17:48.04:0,48,717	0/1:23,0:23:48.57:49,0,177	0/1:24,0:23:78.07:78,0,151	0/1:17,2:19:8.33:105,0,8
chr10	13065093	.	GTTT	G	7870.55	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-1.629;DP=592;FS=11.394;HRun=16;HaplotypeScore=95.4760;InbreedingCoeff=0.8517;MQ=68.35;MQ0=5;MQRankSum=-0.906;QD=16.19;ReadPosRankSum=5.692;VQSLOD=2.6862;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:15:33.91:0,34,484	1/1:1,4:5:5.89:64,6,0	0/0:42,0:16:32.99:0,33,357	0/0:28,0:12:21.40:0,21,226	1/1:10,12:24:34.06:369,34,0	1/1:11,21:34:38.25:591,38,0	1/1:5,3:9:11.65:101,12,0	1/1:14,15:31:12.53:314,13,0	1/1:2,8:11:16.42:190,16,0	1/1:8,9:20:33.98:333,34,0	1/1:6,21:27:43.53:456,44,0	1/1:8,19:29:11.56:488,12,0	1/1:7,12:20:23.75:231,24,0	1/1:6,10:16:1.71:172,2,0	1/1:3,18:21:48.11:513,48,0	1/1:3,14:18:32.80:335,33,0	1/1:9,22:31:65.91:705,66,0	1/1:5,8:15:19.27:208,19,0	1/1:8,10:18:14.74:284,15,0	1/1:8,15:31:27.45:394,27,0	1/1:3,4:7:11.97:124,12,0	1/1:2,13:17:19.46:353,19,0	1/1:6,12:20:23.83:363,24,0	1/1:9,8:17:21.88:255,22,0	0/0:17,0:21:51.10:0,51,745	1/1:10,9:22:6.63:262,7,0	1/1:9,13:22:34.26:374,34,0	1/1:4,15:19:36.01:387,36,0
chr10	13065107	.	TTTC	T	1436.42	PASS	AB=0.989;AC=25;AF=0.446;AN=56;BaseQRankSum=10.532;DP=559;FS=19.831;HRun=0;HaplotypeScore=111.0209;InbreedingCoeff=-0.6380;MQ=71.94;MQ0=5;MQRankSum=-3.630;QD=3.19;ReadPosRankSum=9.474;VQSLOD=-0.2677;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:45.53:0,46,575	1/1:4,0:4:4.52:18,5,0	0/0:44,0:18:36.13:0,36,457	0/0:28,0:15:25.78:0,26,331	0/1:19,0:19:47.77:48,0,81	0/1:27,0:27:6.84:127,0,7	0/1:6,0:6:5.52:6,0,30	0/1:23,1:24:72.97:73,0,157	0/1:13,0:13:22.01:22,0,78	0/1:17,1:18:66.71:67,0,91	0/1:24,0:24:36.78:70,0,37	0/1:28,0:28:62.50:103,0,63	0/1:18,0:18:46.39:46,0,88	0/1:15,0:15:21.53:22,0,91	0/1:24,0:24:38.25:115,0,38	0/1:23,0:23:44.54:45,0,137	0/1:28,1:29:33.74:208,0,34	0/1:13,0:13:22.19:22,0,68	0/1:16,0:16:67.28:67,0,138	0/1:32,0:32:64.55:65,0,170	0/1:7,0:7:8.92:17,0,9	0/1:19,0:19:43.15:47,0,43	0/1:21,0:21:99:105,0,134	0/1:10,1:11:15.26:70,0,15	0/0:19,0:19:51.15:0,51,842	0/1:20,0:20:36.84:37,0,185	0/1:19,1:20:80.27:102,0,80	0/1:19,0:19:12.64:94,0,13
chr10	13065978	.	GAGAA	G	1427.44	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.717;DP=659;FS=7.432;HRun=0;HaplotypeScore=102.3986;InbreedingCoeff=0.9946;MQ=81.66;MQ0=0;MQRankSum=-3.960;QD=39.65;ReadPosRankSum=0.513;VQSLOD=3.7587;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:57.11:0,57,1403	0/0:9,0:9:27.09:0,27,720	0/0:27,0:27:78.16:0,78,1725	0/0:16,0:16:42.14:0,42,980	0/0:35,0:35:99:0,105,2719	1/1:1,25:26:54.18:990,54,0	1/1:0,10:10:30.10:559,30,0	0/0:36,0:36:99:0,102,2720	0/0:26,0:26:78.25:0,78,2007	0/0:29,0:29:84.28:0,84,2149	0/0:25,0:25:72.22:0,72,1764	0/0:31,0:31:84.29:0,84,2217	0/0:20,0:20:60.21:0,60,1600	0/0:22,0:22:66.23:0,66,1759	0/0:22,0:22:63.20:0,63,1594	0/0:39,0:39:99:0,111,2827	0/0:19,0:19:48.12:0,48,1189	0/0:6,0:6:18.03:0,18,402	0/0:22,0:22:63.22:0,63,1676	0/0:35,0:35:99:0,99,2530	0/0:11,0:11:33.11:0,33,880	0/0:33,0:33:96.33:0,96,2553	0/0:32,0:32:93.31:0,93,2410	0/0:16,0:16:48.15:0,48,1194	0/0:27,0:27:81.27:0,81,2086	0/0:26,0:26:69.22:0,69,1683	0/0:30,0:30:84.26:0,84,2102	0/0:10,0:10:30.10:0,30,800
chr10	13068679	.	TG	T	6753.66	PASS	AB=0.979;AC=53;AF=0.946;AN=56;BaseQRankSum=4.161;DP=592;FS=0.739;HRun=1;HaplotypeScore=112.2896;InbreedingCoeff=0.0564;MQ=75.86;MQ0=3;MQRankSum=-0.723;QD=11.41;ReadPosRankSum=6.645;VQSLOD=2.9767;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:17:16.21:154,16,0	1/1:7,0:7:16.79:98,17,0	0/1:30,1:17:5.34:5,0,174	0/1:29,1:19:68:69,0,68	1/1:18,1:19:51.76:325,52,0	1/1:17,0:17:49.15:298,49,0	1/1:10,0:10:4.03:127,4,0	1/1:36,0:36:88.97:450,89,0	1/1:18,2:20:20.33:253,20,0	0/1:17,0:17:12.01:111,0,12	1/1:16,0:16:22.36:161,22,0	1/1:20,0:20:15.69:175,16,0	1/1:20,1:21:19.17:169,19,0	1/1:20,0:20:30.67:147,31,0	1/1:31,2:33:58.15:449,58,0	1/1:30,1:31:67.30:349,67,0	1/1:35,3:38:66.72:526,67,0	1/1:12,3:15:34.17:220,34,0	1/1:17,0:17:38.35:208,38,0	1/1:22,4:26:48.04:430,48,0	1/1:19,0:19:50.26:272,50,0	1/1:17,2:19:24.46:294,24,0	1/1:12,0:12:24.93:136,25,0	1/1:12,2:14:38.19:297,38,0	1/1:12,0:12:5.57:99,6,0	1/1:31,0:31:49.96:325,50,0	1/1:29,1:30:68.74:420,69,0	1/1:12,0:12:34.11:186,34,0
chr10	13068680	.	GT	G	16280.71	PASS	AB=0.795;AC=54;AF=0.964;AN=56;BaseQRankSum=-4.484;DP=591;FS=11.574;HRun=4;HaplotypeScore=80.0595;InbreedingCoeff=-0.0367;MQ=74.51;MQ0=3;MQRankSum=-0.046;QD=27.55;ReadPosRankSum=2.567;VQSLOD=3.9463;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,15:19:33.10:400,33,0	1/1:0,7:7:18.06:222,18,0	0/1:24,7:16:97.02:210,0,97	0/1:21,9:18:13.97:283,0,14	1/1:1,18:19:54.14:635,54,0	1/1:0,17:17:51.16:631,51,0	1/1:2,8:10:26.99:302,27,0	1/1:3,34:37:99:1229,102,0	1/1:5,14:19:44.76:530,45,0	1/1:3,14:17:42.13:516,42,0	1/1:1,15:16:39.12:481,39,0	1/1:3,17:20:39.04:460,39,0	1/1:3,17:20:39.18:454,39,0	1/1:0,19:19:33.10:409,33,0	1/1:5,28:33:82.52:967,83,0	1/1:1,30:31:72.23:889,72,0	1/1:6,32:38:89.85:1061,90,0	1/1:3,12:15:35.32:407,35,0	1/1:0,17:17:51.12:604,51,0	1/1:5,21:26:69.16:834,69,0	1/1:1,18:19:53.93:638,54,0	1/1:3,16:19:48.15:583,48,0	1/1:0,12:12:26.70:329,27,0	1/1:3,12:15:39.12:475,39,0	1/1:1,11:12:30.09:372,30,0	1/1:1,29:30:89.83:1057,90,0	1/1:2,28:30:72.15:856,72,0	1/1:0,12:12:36.11:446,36,0
chr10	13068683	.	TA	T	6477.38	PASS	AB=0.971;AC=52;AF=0.929;AN=56;BaseQRankSum=-0.960;DP=615;FS=17.275;HRun=1;HaplotypeScore=121.0271;InbreedingCoeff=-0.0473;MQ=73.12;MQ0=3;MQRankSum=-0.212;QD=10.53;ReadPosRankSum=8.356;VQSLOD=0.9195;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:20,1:21:20.47:146,0,20	1/1:8,0:8:2.66:70,3,0	0/1:32,1:18:8.65:9,0,201	0/1:28,0:17:33.96:71,0,34	1/1:22,0:22:28.54:247,29,0	1/1:18,0:18:48.71:273,49,0	1/1:10,0:10:4.06:133,4,0	1/1:38,0:38:63.99:396,64,0	1/1:18,2:20:20.37:244,20,0	1/1:16,0:16:11.42:159,11,0	1/1:16,1:17:36.51:206,37,0	0/1:22,1:23:12.99:191,0,13	1/1:21,0:21:38.88:189,39,0	1/1:19,0:19:30.57:142,31,0	1/1:32,1:33:77.19:408,77,0	1/1:31,0:31:67.49:378,67,0	1/1:36,1:37:85.51:525,86,0	1/1:17,0:17:13.41:186,13,0	1/1:18,0:18:38.47:187,38,0	1/1:27,0:27:55.38:427,55,0	1/1:21,0:21:50.71:279,51,0	1/1:18,0:18:45.42:256,45,0	1/1:15,0:15:6.11:146,6,0	1/1:16,0:16:13.05:239,13,0	1/1:11,0:11:27.75:136,28,0	1/1:30,0:30:72.58:312,73,0	1/1:33,0:32:28.92:350,29,0	1/1:12,0:12:33.81:171,34,0
chr10	13068695	.	C	CT	1288.97	PASS	AB=0.824;AC=12;AF=0.214;AN=56;BaseQRankSum=-1.308;DP=636;FS=1.572;HRun=14;HaplotypeScore=140.3230;InbreedingCoeff=0.5805;MQ=72.79;MQ0=3;MQRankSum=-5.131;QD=7.04;ReadPosRankSum=-2.108;VQSLOD=1.4611;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:20,2:24:6.83:7,0,194	0/0:7,0:8:11.39:0,11,66	0/0:39,0:23:7.95:0,8,85	0/0:32,0:19:5.31:0,5,24	0/0:17,0:20:31.45:0,31,197	1/1:10,9:22:23.67:339,24,0	0/1:6,3:10:1.50:92,0,2	0/1:27,10:38:4.59:323,0,5	0/0:16,0:18:29.73:0,30,182	0/1:12,2:15:2.42:2,0,100	0/0:19,0:19:41.26:0,41,266	0/0:27,1:28:28.73:0,29,298	0/0:17,0:17:20.55:0,21,131	0/0:18,0:18:17.62:0,18,115	0/0:36,0:37:71.89:0,72,451	0/0:31,0:32:40.93:0,41,265	0/0:31,0:32:58.74:0,59,374	0/0:17,1:18:9.14:0,9,185	1/1:13,3:17:4.08:136,4,0	1/1:21,9:31:3.62:291,4,0	1/1:13,13:26:32.82:254,33,0	0/0:18,0:18:44.01:0,44,278	0/0:18,0:20:40.19:0,40,250	0/0:16,1:17:16.38:0,16,190	0/0:12,0:12:23.56:0,24,151	0/0:27,0:28:51.36:0,51,318	0/0:29,0:29:52.02:0,52,330	0/0:10,0:10:17.69:0,18,114
chr10	13071084	.	T	TA	2800.24	PASS	AB=0.977;AC=14;AF=0.250;AN=56;BaseQRankSum=-5.262;DP=466;FS=3.987;HRun=9;HaplotypeScore=66.9959;InbreedingCoeff=0.8023;MQ=74.68;MQ0=3;MQRankSum=-1.744;QD=17.29;ReadPosRankSum=-3.090;VQSLOD=3.1434;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:71.84:0,72,603	0/0:7,0:7:17.99:0,18,156	0/1:16,0:8:11.40:24,0,11	0/1:20,0:16:11.12:25,0,11	0/0:17,0:17:35.98:0,36,310	1/1:0,25:25:54.01:579,54,0	1/1:4,11:15:30.08:330,30,0	1/1:4,25:29:75.15:795,75,0	0/0:12,0:12:29.96:0,30,257	0/0:11,0:11:26.97:0,27,231	0/0:10,0:10:26.97:0,27,229	0/0:24,0:24:62.86:0,63,526	0/0:9,0:9:23.98:0,24,206	0/0:12,0:12:26.99:0,27,234	0/0:21,0:21:44.91:0,45,372	0/0:13,0:13:26.90:0,27,222	0/0:22,0:22:53.96:0,54,461	0/0:16,0:16:17.96:0,18,152	1/1:2,23:25:69.07:720,69,0	1/1:3,14:17:33.09:362,33,0	1/1:3,10:13:15.03:156,15,0	0/0:3,0:3:8.90:0,9,68	0/0:11,0:11:26.98:0,27,231	0/0:5,0:5:11.99:0,12,102	0/0:17,0:17:41.91:0,42,350	0/0:22,0:22:62.36:0,62,529	0/0:25,0:25:71.98:0,72,625	0/0:18,0:18:53.97:0,54,464
chr10	13071621	.	A	AT	2931.68	PASS	AB=0.848;AC=41;AF=0.732;AN=56;BaseQRankSum=4.234;DP=474;FS=0.504;HRun=15;HaplotypeScore=91.2796;InbreedingCoeff=0.5650;MQ=68.80;MQ0=6;MQRankSum=-1.491;QD=8.08;ReadPosRankSum=-0.224;VQSLOD=2.7875;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:22,2:27:36.01:36,0,194	1/1:2,7:9:17.98:150,18,0	0/0:40,0:12:9.29:0,9,50	0/1:23,0:14:16.34:16,0,47	1/1:9,14:24:29.58:218,30,0	1/1:5,11:16:6.91:159,7,0	0/1:4,5:8:30.73:68,0,31	0/0:15,0:27:25.54:0,26,80	1/1:6,7:14:4.57:59,5,0	1/1:6,8:15:22.04:143,22,0	1/1:5,2:10:8.76:57,9,0	1/1:12,3:16:22.26:165,22,0	1/1:14,4:18:16.49:174,16,0	1/1:5,5:10:8.85:63,9,0	1/1:6,8:16:16.05:236,16,0	1/1:8,5:15:19.96:179,20,0	1/1:11,24:35:29.68:371,30,0	1/1:6,8:15:13.07:162,13,0	0/0:8,0:20:29.08:0,29,106	0/0:2,0:11:17.37:0,17,56	0/0:5,0:5:1.20:0,1,3	1/1:3,5:8:8.99:76,9,0	1/1:3,5:9:4.53:59,5,0	1/1:0,7:7:11.99:101,12,0	0/0:7,0:7:14.69:0,15,90	1/1:14,7:22:32.59:249,33,0	1/1:7,17:28:26.37:258,26,0	1/1:3,11:16:6.88:114,7,0
chr10	13074414	.	C	CAA	146.06	PASS	AC=12;AF=0.600;AN=20;BaseQRankSum=4.198;DP=86;FS=22.388;HRun=0;HaplotypeScore=35.8880;InbreedingCoeff=0.5819;MQ=90.18;MQ0=14;MQRankSum=0.011;QD=12.17;ReadPosRankSum=-3.728;VQSLOD=1.0017;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:83.77:0,84,1339	1/1:0,1:1:3.01:39,3,0	0/0:9,0:6:15:0,15,220	0/0:12,0:9:6.29:0,6,235	1/1:2,0:1:3.01:31,3,0	./.	./.	./.	./.	./.	./.	./.	./.	1/1:1,1:1:3.01:40,3,0	./.	./.	1/1:3,1:2:2.99:23,3,0	1/1:0,1:1:3.01:39,3,0	./.	./.	./.	1/1:1,1:2:6.02:77,6,0	./.	./.	0/0:14,0:14:42.13:0,42,662	./.	./.	./.
chr10	13084424	.	TG	T	15588.57	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=6.344;DP=711;FS=4.350;HRun=7;HaplotypeScore=78.3703;InbreedingCoeff=0.9748;MQ=81.14;MQ0=0;MQRankSum=-4.603;QD=25.89;ReadPosRankSum=3.975;VQSLOD=5.6074;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,120,1452	1/1:0,12:12:36.08:367,36,0	0/0:26,0:25:52.52:0,53,619	0/0:20,0:20:6.93:0,7,321	1/1:4,26:30:75.10:752,75,0	1/1:1,21:22:57.13:581,57,0	1/1:1,16:17:48.11:489,48,0	1/1:2,26:28:78.13:776,78,0	1/1:0,27:27:81.18:826,81,0	1/1:0,24:24:69.14:697,69,0	1/1:1,19:20:51.12:520,51,0	1/1:5,32:37:90.20:918,90,0	1/1:2,15:17:42.09:428,42,0	1/1:3,25:28:52.27:684,52,0	1/1:2,39:41:99:1039,102,0	1/1:2,26:28:75.17:765,75,0	1/1:2,42:44:99:1224,120,0	1/1:1,25:26:72.16:734,72,0	1/1:4,12:17:39.03:368,39,0	1/1:3,16:19:36.03:355,36,0	1/1:6,26:32:66.12:666,66,0	1/1:3,20:23:57.05:567,57,0	1/1:1,20:21:51.11:520,51,0	1/1:2,17:19:48.11:489,48,0	0/0:22,0:22:63.19:0,63,780	1/1:2,26:28:81.14:810,81,0	1/1:4,23:27:69.15:703,69,0	1/1:1,13:15:32.11:312,32,0
chr10	13084431	.	GT	G	2748.01	PASS	AB=0.993;AC=36;AF=0.643;AN=56;BaseQRankSum=14.357;DP=725;FS=4.572;HRun=1;HaplotypeScore=121.6500;InbreedingCoeff=0.0688;MQ=83.87;MQ0=0;MQRankSum=-5.922;QD=4.51;ReadPosRankSum=10.758;VQSLOD=-0.5373;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,129,1717	1/1:12,0:12:27.84:94,28,0	0/0:28,0:27:63.89:0,64,896	0/0:23,0:23:15.61:0,16,416	1/1:28,0:28:13.58:141,14,0	1/1:24,0:24:0.42:85,0,0	1/1:17,1:18:16.07:129,16,0	0/1:34,0:34:18.69:19,0,135	1/1:27,0:27:66.44:260,66,0	1/1:25,0:25:5.37:57,5,0	0/1:21,0:21:5.78:77,0,6	0/1:37,2:39:10.61:199,0,11	1/1:17,1:18:11.30:110,11,0	1/1:27,0:27:10.53:158,11,0	1/1:41,0:41:37.93:281,38,0	0/1:30,0:30:28.82:154,0,29	1/1:44,0:44:48.38:249,48,0	1/1:25,0:25:53.29:172,53,0	0/1:14,0:14:10.66:23,0,11	0/1:16,0:16:6.79:64,0,7	0/1:30,0:30:41.25:67,0,41	0/1:25,0:25:42.79:68,0,43	0/1:22,0:22:3.53:90,0,4	0/1:20,0:20:24.09:75,0,24	0/0:21,0:21:59.76:0,60,856	0/1:29,1:30:34.84:77,0,35	1/1:23,1:24:58.16:240,58,0	0/1:15,0:15:8.75:36,0,9
chr10	13084620	.	TAAGACC	T	268.31	PASS	AB=0.700;AC=1;AF=0.018;AN=56;BaseQRankSum=4.896;DP=586;FS=5.148;HRun=0;HaplotypeScore=135.7620;InbreedingCoeff=-0.0231;MQ=70.58;MQ0=1;MQRankSum=-3.892;QD=12.78;ReadPosRankSum=1.910;VQSLOD=2.3550;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:93.30:0,93,3339	0/0:6,0:6:18.06:0,18,634	0/0:18,0:17:42.11:0,42,1241	0/0:18,0:14:4.81:0,5,888	0/0:23,0:23:66.22:0,66,2324	0/0:20,0:19:51.18:0,51,1885	0/0:27,0:27:72.25:0,72,2545	0/0:28,0:28:84.29:0,84,2970	0/0:29,0:29:87.30:0,87,3238	0/0:15,0:15:42.14:0,42,1478	0/0:21,0:21:60.21:0,60,2224	0/0:23,0:23:69.24:0,69,2569	0/0:12,0:12:36.12:0,36,1262	0/0:19,0:19:57.20:0,57,2129	0/0:33,0:33:96.33:0,96,3480	0/0:21,0:21:63.22:0,63,2372	0/0:26,0:26:78.27:0,78,2891	0/0:23,0:23:69.18:0,69,2361	0/0:21,0:21:60.21:0,60,2214	0/1:12,9:20:99:343,0,1263	0/0:18,0:18:48.14:0,48,1604	0/0:18,0:18:54.19:0,54,1866	0/0:19,0:19:57.20:0,57,2070	0/0:18,0:18:54.19:0,54,1978	0/0:16,0:16:48.16:0,48,1687	0/0:17,0:17:51.18:0,51,1839	0/0:28,0:28:84.27:0,84,2957	0/0:17,0:17:51.18:0,51,1847
chr10	13084628	.	TC	T	1988.95	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=8.441;DP=549;FS=0.934;HRun=9;HaplotypeScore=66.5390;InbreedingCoeff=0.9662;MQ=69.44;MQ0=1;MQRankSum=-0.739;QD=15.42;ReadPosRankSum=-3.112;VQSLOD=3.2111;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:51.15:0,51,589	0/0:5,0:5:15.04:0,15,173	0/0:16,0:15:29.98:0,30,302	0/0:19,0:13:22.02:0,22,201	0/0:23,0:23:51.10:0,51,564	1/1:3,21:24:54.02:494,54,0	1/1:3,19:22:45.02:412,45,0	1/1:11,15:26:39.47:366,39,0	0/0:29,0:29:81.22:0,81,924	0/0:14,0:14:36.11:0,36,415	0/0:20,0:20:48.14:0,48,553	0/0:26,0:26:63.18:0,63,719	0/0:10,0:10:27.06:0,27,301	0/0:18,0:18:48.14:0,48,554	0/0:29,0:29:75.19:0,75,837	0/0:20,0:20:57.16:0,57,647	0/0:24,0:24:60.18:0,60,692	0/0:18,0:19:50.96:0,51,551	1/1:3,17:20:48.02:439,48,0	1/1:4,8:20:41.55:267,42,0	1/1:5,10:16:23.04:198,23,0	0/0:15,1:16:5.63:0,6,318	0/0:19,0:19:48.09:0,48,539	0/0:17,0:17:36.09:0,36,404	0/0:13,1:14:11.65:0,12,388	0/0:16,0:16:41.74:0,42,475	0/0:28,0:27:75.22:0,75,866	0/0:13,0:13:33.10:0,33,381
chr10	13084747	.	AAGAGCCCTTATTTAAAAACGAACAAG	A	1243.74	PASS	AC=10;AF=0.185;AN=54;BaseQRankSum=3.972;DP=524;FS=1.334;HRun=0;HaplotypeScore=326.4309;InbreedingCoeff=0.7685;MQ=77.58;MQ0=0;MQRankSum=-3.537;QD=14.98;ReadPosRankSum=-0.317;VQSLOD=1.7755;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:60.18:0,60,5434	0/0:12,0:12:18.06:0,18,1712	0/0:18,0:18:21.07:0,21,757	0/0:13,0:13:3.01:0,3,132	0/0:23,0:23:39.13:0,39,3920	1/1:14,4:14:3.01:202,3,0	./.	1/1:20,0:20:3:27,3,0	0/0:19,0:19:27.09:0,27,2794	0/0:24,0:24:48.16:0,48,4475	0/0:18,0:18:45.15:0,45,4210	0/0:19,0:19:42.14:0,42,3695	0/0:20,0:20:36.12:0,36,3049	0/0:21,0:21:48.16:0,48,4788	0/0:24,0:24:45.15:0,45,4784	0/0:23,0:23:42.14:0,42,4239	0/0:28,0:28:63.22:0,63,6473	0/0:22,0:22:51.18:0,51,5336	1/1:15,2:16:3.01:202,3,0	1/1:16,5:21:15.05:748,15,0	1/1:6,1:7:3.01:202,3,0	0/0:16,0:16:24.08:0,24,1561	0/0:17,0:17:33.11:0,33,3168	0/0:14,0:14:27.09:0,27,2755	0/0:27,0:27:57.20:0,57,5378	0/0:12,0:12:30.10:0,30,2621	0/0:18,0:18:42.14:0,42,4322	0/0:13,0:13:21.07:0,21,2284
chr10	13085786	.	C	CA	2997.78	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=5.259;DP=681;FS=6.159;HRun=8;HaplotypeScore=80.8674;InbreedingCoeff=0.9088;MQ=58.24;MQ0=4;MQRankSum=-2.571;QD=21.26;ReadPosRankSum=-3.598;VQSLOD=2.4308;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:25:69.03:0,69,630	0/0:14,0:14:37.19:0,37,354	0/0:29,0:16:0.35:0,0,141	0/0:27,0:14:1.74:0,2,137	0/0:38,0:38:95.64:0,96,859	1/1:1,15:17:45.13:514,45,0	1/1:6,15:22:41.96:464,42,0	1/1:25,15:40:93.19:876,93,0	0/0:20,0:20:48:0,48,433	0/0:32,0:32:90.05:0,90,821	0/0:34,0:34:86.71:0,87,796	0/0:24,0:24:62.99:0,63,569	0/0:23,0:23:66.03:0,66,603	0/0:20,0:20:47.99:0,48,430	0/0:20,0:20:57.01:0,57,512	0/0:18,0:18:48.03:0,48,439	0/0:36,0:34:86.71:0,87,790	0/0:23,0:23:63.01:0,63,569	1/1:14,9:21:20.17:392,20,0	1/1:27,2:29:72.06:750,72,0	1/1:7,3:9:19.27:186,19,0	0/0:21,0:21:51:0,51,460	0/0:25,1:26:30.42:0,30,510	0/0:18,0:18:51.01:0,51,458	0/0:22,0:22:57.02:0,57,521	0/0:33,0:33:78.01:0,78,706	0/0:21,0:21:54.01:0,54,493	0/0:15,0:15:42.02:0,42,384
chr10	13085802	.	AC	A	2141.17	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=9.228;DP=658;FS=10.580;HRun=1;HaplotypeScore=76.7530;InbreedingCoeff=0.9861;MQ=60.67;MQ0=1;MQRankSum=-1.081;QD=22.78;ReadPosRankSum=-4.699;VQSLOD=1.6066;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:27:80.30:0,80,934	0/0:16,0:16:41.78:0,42,465	0/0:18,1:12:10.10:0,10,244	0/0:23,0:12:27.99:0,28,232	0/0:33,0:33:98.61:0,99,1197	0/0:18,0:18:51.15:0,51,659	0/0:20,0:20:54.16:0,54,690	1/1:24,15:39:87.15:963,87,0	0/0:16,0:16:48.12:0,48,595	0/0:33,0:33:99:0,99,1270	0/0:31,0:31:89.82:0,90,1112	0/0:22,0:22:63.14:0,63,799	0/0:23,0:23:69.21:0,69,886	0/0:18,0:18:54.13:0,54,682	0/0:25,0:25:69.12:0,69,814	0/0:20,0:20:57.04:0,57,669	0/0:34,0:32:89.63:0,90,1123	0/0:25,0:25:68.19:0,68,833	1/1:12,6:18:31.48:356,31,0	1/1:24,2:26:64.40:762,64,0	1/1:7,4:10:23.20:220,23,0	0/0:19,0:19:57.15:0,57,709	0/0:24,0:24:69.08:0,69,856	0/0:21,0:21:45.16:0,45,708	0/0:24,0:24:69.17:0,69,870	0/0:31,0:31:90.17:0,90,1097	0/0:25,0:25:74.34:0,74,859	0/0:16,0:16:48.07:0,48,612
chr10	13086301	.	G	GA	1733.60	PASS	AB=0.811;AC=13;AF=0.232;AN=56;BaseQRankSum=-4.801;DP=584;FS=2.004;HRun=11;HaplotypeScore=70.9270;InbreedingCoeff=0.6913;MQ=86.51;MQ0=1;MQRankSum=-1.560;QD=9.53;ReadPosRankSum=-2.030;VQSLOD=2.5095;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:56.53:0,57,440	0/0:11,0:11:29.87:0,30,232	0/0:46,0:36:21.96:0,22,196	0/1:33,0:20:6.87:7,0,63	0/0:22,1:24:25.36:0,25,366	1/1:5,0:25:36.93:185,37,0	0/1:4,0:17:20.57:74,0,21	1/1:14,22:37:62.90:604,63,0	0/0:13,0:13:32.85:0,33,250	0/0:17,0:17:32.85:0,33,255	0/0:19,0:21:22.19:0,22,306	0/0:11,2:13:2.42:0,2,200	0/0:14,0:15:28.91:0,29,215	0/0:15,0:16:12.26:0,12,185	0/0:29,0:29:77.67:0,78,602	0/0:24,0:26:66.70:0,67,485	0/0:13,0:13:38.85:0,39,302	0/0:13,0:13:33.45:0,33,245	1/1:3,11:14:32.26:299,32,0	1/1:7,18:26:31.91:471,32,0	1/1:4,12:17:9.66:265,10,0	0/0:22,2:24:26.29:0,26,387	0/1:11,2:13:3.57:4,0,159	0/0:14,0:14:32.83:0,33,255	0/0:10,0:10:26.89:0,27,209	0/0:26,0:27:70.74:0,71,537	0/0:25,1:27:25.17:0,25,355	0/0:16,0:16:29.84:0,30,232
chr10	13089549	.	GT	G	377.47	PASS	AC=14;AF=0.778;AN=18;BaseQRankSum=-2.382;DP=22;FS=2.796;HRun=1;HaplotypeScore=15.2299;MQ=131.12;MQ0=0;MQRankSum=-2.670;QD=25.16;ReadPosRankSum=-0.794;VQSLOD=3.1625;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,3:3:6.02:84,6,0	1/1:0,1:1:3.01:42,3,0	0/0:2,0:2:3:0,3,25	0/0:3,0:3:5.75:0,6,60	./.	./.	./.	./.	./.	1/1:0,2:2:6.02:82,6,0	./.	1/1:0,1:1:3.01:42,3,0	./.	./.	./.	./.	./.	./.	./.	./.	1/1:1,5:6:12.04:168,12,0	./.	1/1:1,0:1:3:25,3,0	1/1:1,0:1:2.99:24,3,0	./.	./.	./.	./.
chr10	13090588	.	TTG	T	12369.10	PASS	AB=1.000;AC=51;AF=0.911;AN=56;BaseQRankSum=-5.460;DP=498;FS=2.594;HRun=0;HaplotypeScore=173.3317;InbreedingCoeff=0.5707;MQ=44.92;MQ0=1;MQRankSum=-4.635;QD=26.37;ReadPosRankSum=-1.553;VQSLOD=5.4508;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:23:14.18:125,14,0	1/1:4,0:4:6.90:70,7,0	1/1:8,0:3:0.82:15,1,0	0/0:7,0:5:5.24:0,5,60	1/1:23,0:23:33.13:565,33,0	0/0:22,0:22:8.05:0,8,207	0/1:14,0:14:19.10:19,0,103	1/1:33,0:32:64.23:816,64,0	1/1:17,0:17:42.47:499,42,0	1/1:19,2:21:53.46:636,53,0	1/1:17,0:17:50.95:601,51,0	1/1:16,0:16:42.05:529,42,0	1/1:16,0:16:48.15:670,48,0	1/1:17,0:17:36.07:463,36,0	1/1:19,0:19:52.59:734,53,0	1/1:33,1:34:90:1076,90,0	1/1:23,1:22:53.99:611,54,0	1/1:18,0:18:26.65:484,27,0	1/1:17,2:19:40.30:501,40,0	1/1:16,1:17:46.61:540,47,0	1/1:8,0:7:10.26:97,10,0	1/1:14,1:15:32.68:414,33,0	1/1:20,0:20:55.54:672,56,0	1/1:12,0:11:22.56:277,23,0	1/1:18,1:18:36.82:219,37,0	1/1:17,0:17:45.10:559,45,0	1/1:31,0:30:74.46:938,74,0	1/1:7,0:7:20.99:242,21,0
chr10	13090589	.	TG	T	9109.70	PASS	AB=0.958;AC=53;AF=0.946;AN=56;BaseQRankSum=-4.025;DP=489;FS=7.262;HRun=1;HaplotypeScore=175.7155;InbreedingCoeff=-0.0288;MQ=44.13;MQ0=1;MQRankSum=-6.056;QD=18.63;ReadPosRankSum=-2.619;VQSLOD=3.6863;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,14:23:47.95:562,48,0	1/1:2,2:4:9.04:54,9,0	1/1:7,0:2:1.19:9,1,0	0/1:6,1:5:33.08:33,0,38	1/1:9,14:23:45.85:379,46,0	0/1:22,0:22:35.27:35,0,51	0/1:13,0:13:19.47:44,0,19	1/1:8,23:31:65.30:495,65,0	1/1:6,12:18:44.77:341,45,0	1/1:5,16:21:56.17:428,56,0	1/1:4,13:17:50.63:369,51,0	1/1:6,11:17:41.44:328,41,0	1/1:1,15:16:47.72:353,48,0	1/1:6,10:16:39.70:299,40,0	1/1:2,17:19:56.65:419,57,0	1/1:6,27:33:91.96:669,92,0	1/1:10,13:21:57.46:421,57,0	1/1:5,12:17:45.99:347,46,0	1/1:6,12:18:50.92:440,51,0	1/1:6,12:18:47.84:391,48,0	1/1:4,3:6:11.90:93,12,0	1/1:4,10:14:32.57:254,33,0	1/1:5,14:19:56.57:431,57,0	1/1:1,10:10:23.82:184,24,0	1/1:7,12:18:50.97:547,51,0	1/1:3,14:17:44.79:345,45,0	1/1:10,21:30:84.62:675,85,0	1/1:4,3:7:20.93:165,21,0
chr10	13090593	.	TTG	T	12361.64	PASS	AB=1.000;AC=51;AF=0.911;AN=56;BaseQRankSum=-5.454;DP=505;FS=3.967;HRun=0;HaplotypeScore=173.2421;InbreedingCoeff=0.5398;MQ=43.41;MQ0=1;MQRankSum=-5.581;QD=26.25;ReadPosRankSum=-1.802;VQSLOD=5.1742;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:22:25.96:170,26,0	1/1:3,1:4:7.57:73,8,0	1/1:7,0:2:2.31:19,2,0	0/1:7,0:5:9.36:9,0,31	1/1:22,2:24:38.81:590,39,0	0/0:22,0:22:8.36:0,8,187	0/0:12,0:12:0.42:0,0,94	1/1:36,3:38:68.83:841,69,0	1/1:18,0:18:42.02:498,42,0	1/1:22,0:22:51.14:625,51,0	1/1:18,1:19:50.96:593,51,0	1/1:18,0:18:45.52:557,46,0	1/1:17,0:17:51.15:692,51,0	1/1:16,0:16:36.57:470,37,0	1/1:19,1:20:52.65:735,53,0	1/1:32,2:34:88.21:1067,88,0	1/1:25,0:23:54.81:603,55,0	1/1:19,0:19:41.53:482,42,0	1/1:13,1:14:9.55:393,10,0	1/1:20,1:21:48.02:532,48,0	1/1:7,1:7:14.97:140,15,0	1/1:12,1:13:30.08:387,30,0	1/1:19,0:19:55.99:670,56,0	1/1:10,1:10:23.05:282,23,0	1/1:19,0:18:36.16:214,36,0	1/1:17,2:19:44.65:565,45,0	1/1:29,0:28:72.62:911,73,0	1/1:7,0:7:21:242,21,0
chr10	13090594	.	TG	T	9121.61	PASS	AB=0.958;AC=53;AF=0.946;AN=56;BaseQRankSum=-3.472;DP=488;FS=4.188;HRun=1;HaplotypeScore=170.6310;InbreedingCoeff=-0.0356;MQ=43.20;MQ0=1;MQRankSum=-5.305;QD=18.69;ReadPosRankSum=-2.460;VQSLOD=4.1972;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:21:54.11:586,54,0	1/1:2,1:3:8.19:53,8,0	1/1:7,0:2:2.20:11,2,0	0/1:6,1:5:23.84:24,0,39	1/1:13,11:24:56.95:467,57,0	0/1:22,0:22:32.91:42,0,33	0/1:12,0:12:12.06:28,0,12	1/1:17,21:37:72.92:552,73,0	1/1:7,11:18:42.19:320,42,0	1/1:7,13:20:52.06:418,52,0	1/1:8,12:20:50.62:366,51,0	1/1:8,9:17:45.29:364,45,0	1/1:3,14:17:50.73:386,51,0	1/1:6,9:15:38.84:304,39,0	1/1:5,15:20:56.64:429,57,0	1/1:9,23:32:88.64:663,89,0	1/1:11,12:21:58.79:430,59,0	1/1:8,11:19:47.27:373,47,0	1/1:5,9:14:32.82:293,33,0	1/1:10,10:20:48.52:386,49,0	1/1:6,2:7:14.83:113,15,0	1/1:2,9:11:29.78:222,30,0	1/1:8,12:20:59.52:456,60,0	1/1:3,8:10:23.86:189,24,0	1/1:17,1:17:45.03:502,45,0	1/1:8,11:19:47.79:371,48,0	1/1:6,19:25:74.74:609,75,0	1/1:4,3:7:20.93:167,21,0
chr10	13092393	.	T	TTATG	9168.52	PASS	AB=0.660;AC=37;AF=0.712;AN=52;BaseQRankSum=-9.560;DP=762;FS=2.374;HRun=0;HaplotypeScore=117.3469;InbreedingCoeff=0.6605;MQ=65.92;MQ0=3;MQRankSum=1.763;QD=16.29;ReadPosRankSum=-0.938;VQSLOD=4.4120;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:67.41:0,67,910	1/1:4,8:12:15.05:316,15,0	./.	./.	0/1:17,15:33:6.69:660,0,7	1/1:14,0:28:3.01:52,3,0	1/1:28,0:28:17.87:152,18,0	1/1:42,0:40:4.12:18,4,0	1/1:19,18:38:39.13:908,39,0	1/1:14,14:28:39.12:843,39,0	1/1:17,5:22:12.04:231,12,0	0/1:11,15:27:9.68:721,0,10	0/0:21,0:21:36.08:0,36,470	0/0:24,0:24:36.10:0,36,526	1/1:13,19:32:24.08:555,24,0	1/1:14,19:34:27.09:628,27,0	0/0:20,0:20:23.93:0,24,326	0/1:11,10:20:47.69:261,0,48	1/1:14,3:16:9.01:121,9,0	1/1:12,20:33:45.15:903,45,0	1/1:19,13:33:21.07:489,21,0	0/0:21,0:22:24.03:0,24,343	1/1:21,9:31:15.05:349,15,0	1/1:18,7:25:12.04:277,12,0	0/0:31,0:31:39.13:0,39,591	1/1:12,13:24:36.12:779,36,0	1/1:18,18:35:33.11:766,33,0	1/1:17,1:17:11.98:140,12,0
chr10	13095353	.	ATATATATATGTGTGTGTG	A	993.98	PASS	AB=1.000;AC=15;AF=0.577;AN=26;BaseQRankSum=2.281;DP=60;FS=6.897;HRun=0;HaplotypeScore=31.2019;InbreedingCoeff=0.2973;MQ=62.17;MQ0=3;MQRankSum=-1.126;QD=24.24;ReadPosRankSum=2.396;VQSLOD=0.1619;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:5:15.05:0,15,579	./.	0/0:1,0:1:3.01:0,3,141	0/1:10,0:5:20.31:20,0,193	./.	./.	./.	1/1:3,0:2:6.02:188,6,0	1/1:1,0:1:3.01:97,3,0	0/0:2,0:2:0:0,0,0	./.	1/1:1,0:1:3.01:97,3,0	./.	./.	./.	./.	1/1:10,0:10:6.02:225,6,0	1/1:4,7:11:3.34:212,3,0	./.	./.	./.	./.	./.	./.	0/0:1,0:1:3.01:0,3,125	0/0:1,0:1:0.89:0,1,2	1/1:1,0:1:3.01:97,3,0	1/1:1,3:3:3.01:157,3,0
chr10	13095361	.	ATGTGTGTGTG	A	850.88	PASS	AB=1.000;AC=15;AF=0.577;AN=26;BaseQRankSum=2.710;DP=75;FS=14.427;HRun=0;HaplotypeScore=29.3223;InbreedingCoeff=0.4076;MQ=68.73;MQ0=3;MQRankSum=-2.093;QD=19.79;ReadPosRankSum=2.515;VQSLOD=-0.0734;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:30.10:0,30,1191	./.	0/0:5,0:4:12.04:0,12,576	0/1:12,0:7:14.24:14,0,504	./.	./.	./.	1/1:1,4:4:12.01:238,12,0	1/1:1,0:1:3.01:97,3,0	0/0:2,0:2:0:0,0,0	./.	1/1:1,0:1:3.01:97,3,0	./.	./.	./.	./.	1/1:2,7:9:6.02:169,6,0	1/1:10,0:10:2.54:161,3,0	./.	./.	./.	./.	./.	./.	0/0:3,0:3:9.03:0,9,376	0/0:1,0:1:0.47:0,0,1	1/1:1,0:1:3.01:97,3,0	1/1:4,0:3:3.01:83,3,0
chr10	13098969	.	GGGAGGA	G	2766.62	PASS	AB=1.000;AC=37;AF=0.685;AN=54;BaseQRankSum=5.698;DP=256;FS=69.000;HRun=0;HaplotypeScore=80.9243;InbreedingCoeff=0.1766;MQ=72.80;MQ0=0;MQRankSum=-3.483;QD=16.27;ReadPosRankSum=1.169;VQSLOD=0.0126;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:62.55:0,63,1523	./.	0/0:21,0:17:35.68:0,36,1163	0/0:25,0:22:52.40:0,52,1225	1/1:6,0:5:5.87:41,6,0	1/1:6,0:6:11.83:77,12,0	0/1:10,0:9:32.39:118,0,32	0/1:8,0:8:57.42:218,0,57	0/1:7,0:7:70.89:157,0,71	0/1:12,0:12:99:164,0,109	1/1:4,0:4:8.94:81,9,0	1/1:6,1:7:8.53:155,9,0	0/1:8,0:8:3.70:102,0,4	0/1:11,0:11:64.29:194,0,64	0/1:7,0:7:53.35:117,0,53	0/1:7,0:7:69.51:70,0,74	1/1:8,0:8:17.85:128,18,0	1/1:6,0:6:14.96:161,15,0	1/1:10,0:10:28.48:265,28,0	1/1:3,5:8:6.66:128,7,0	1/1:8,0:8:14.90:136,15,0	1/1:8,0:7:8.97:73,9,0	0/1:7,0:7:48.82:63,0,49	1/1:9,0:9:14.92:125,15,0	0/0:15,0:15:42.10:0,42,1153	1/1:1,5:6:15.48:214,15,0	1/1:6,0:6:15.42:154,15,0	1/1:1,0:1:1.55:4,2,0
chr10	13098994	.	GGA	G	350.61	PASS	AB=0.909;AC=22;AF=0.407;AN=54;BaseQRankSum=5.647;DP=179;FS=56.315;HRun=0;HaplotypeScore=47.2118;InbreedingCoeff=-0.0558;MQ=58.42;MQ0=4;MQRankSum=-3.997;QD=4.22;ReadPosRankSum=-2.348;VQSLOD=-0.0333;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:35.34:0,35,600	./.	0/0:16,0:7:15.05:0,15,264	0/0:17,0:15:10.15:0,10,376	0/0:5,1:5:3.01:0,3,37	1/1:0,2:2:3:25,3,0	0/1:8,0:7:35.23:35,0,52	0/0:11,0:10:7.31:0,7,202	0/1:3,1:4:22.70:23,0,149	0/1:6,0:6:51.43:51,0,104	0/0:2,0:2:6.02:0,6,113	1/1:5,0:5:5.99:63,6,0	1/1:4,0:3:2.98:23,3,0	0/1:7,2:9:48.24:56,0,48	0/1:3,1:4:27.49:27,0,49	0/1:6,1:7:61.06:61,0,100	0/0:4,1:5:1.25:0,1,3	0/0:2,0:2:2.68:0,3,11	0/1:8,0:6:31.11:31,0,86	1/1:3,1:4:2.99:23,3,0	1/1:9,1:10:0.42:1,0,0	0/0:4,0:3:0:0,0,0	0/0:4,1:4:3.01:0,3,55	0/1:3,1:4:22.01:22,0,51	0/0:12,0:12:31.87:0,32,560	1/1:2,0:2:2.99:23,3,0	0/1:4,0:4:16.11:16,0,52	0/1:2,0:2:14.44:16,0,14
chr10	13099091	.	AG	A	5276.37	PASS	AB=0.640;AC=48;AF=0.857;AN=56;BaseQRankSum=-6.489;DP=243;FS=46.649;HRun=3;HaplotypeScore=37.6021;InbreedingCoeff=0.2657;MQ=71.14;MQ0=8;MQRankSum=-3.503;QD=27.34;ReadPosRankSum=4.137;VQSLOD=1.7766;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:5,13:18:42.06:385,0,42	1/1:1,1:2:2.98:37,3,0	0/0:29,0:11:26.05:0,26,191	0/0:21,0:5:5.95:0,6,55	1/1:0,5:5:3.01:37,3,0	1/1:0,8:8:24.08:297,24,0	1/1:2,8:10:25.32:299,25,0	1/1:4,8:11:27:315,27,0	1/1:0,9:9:24.08:297,24,0	1/1:1,7:7:21.07:260,21,0	0/1:1,1:2:9.03:31,0,9	1/1:0,8:8:24.08:297,24,0	1/1:0,3:3:9.03:111,9,0	0/1:3,6:9:1.82:197,0,2	1/1:0,6:6:18.06:222,18,0	1/1:0,9:9:27.08:334,27,0	1/1:0,7:7:21.07:260,21,0	1/1:0,5:5:15.05:184,15,0	0/1:3,2:4:33.99:65,0,34	1/1:1,3:3:6.02:74,6,0	1/1:4,12:17:39.10:469,39,0	1/1:1,5:6:7.38:142,7,0	1/1:1,2:3:3.01:37,3,0	1/1:2,11:13:21.54:261,22,0	1/1:1,7:8:15.05:183,15,0	1/1:0,9:9:27.08:334,27,0	1/1:0,4:4:6.02:74,6,0	1/1:1,2:3:6.02:74,6,0
chr10	13100309	.	C	CT	1023.50	PASS	AB=0.985;AC=39;AF=0.696;AN=56;BaseQRankSum=0.950;DP=344;FS=0.642;HRun=15;HaplotypeScore=86.9738;InbreedingCoeff=0.1122;MQ=65.18;MQ0=4;MQRankSum=-2.593;QD=3.48;ReadPosRankSum=-1.081;VQSLOD=0.4933;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:13,2:13:33.58:34,0,43	0/1:8,0:8:7.52:36,0,8	0/0:36,1:13:11.88:0,12,86	0/1:41,0:12:2.86:3,0,13	1/1:13,0:13:17.73:123,18,0	0/1:12,0:12:11.08:11,0,27	0/0:6,0:6:8.14:0,8,35	0/1:29,0:28:27.69:28,0,68	1/1:9,0:9:20.29:120,20,0	1/1:12,0:12:6.68:41,7,0	1/1:12,0:12:12.61:94,13,0	1/1:4,0:4:8.76:53,9,0	1/1:3,0:3:5.83:33,6,0	1/1:5,0:5:6.96:32,7,0	1/1:7,0:7:11.52:61,12,0	1/1:6,0:5:8.57:49,9,0	0/1:15,1:16:0.23:85,0,0	1/1:14,0:14:17.05:91,17,0	0/1:18,0:18:12.10:12,0,45	0/1:12,0:12:12.55:13,0,16	0/0:7,0:7:1.54:0,2,8	1/1:3,0:3:2.94:18,3,0	0/1:2,0:2:0:0,0,0	1/1:4,1:5:5.87:40,6,0	0/1:11,0:12:4.67:5,0,46	1/1:19,0:15:17.24:95,17,0	0/1:4,0:4:2.41:14,0,2	1/1:9,1:9:6.88:87,7,0
chr10	13100324	.	T	TAA	3587.58	PASS	AB=0.850;AC=41;AF=0.732;AN=56;BaseQRankSum=-2.692;DP=397;FS=0.000;HRun=5;HaplotypeScore=73.4677;InbreedingCoeff=0.1226;MQ=53.70;MQ0=30;MQRankSum=0.994;QD=11.88;ReadPosRankSum=0.924;VQSLOD=-0.4684;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:14:36.08:0,36,417	0/1:4,0:4:20.72:38,0,21	0/0:65,0:18:5.44:0,5,212	0/1:69,0:9:10.64:11,0,65	0/1:11,0:11:20.37:20,0,28	1/1:3,8:13:3.31:339,3,0	1/1:5,0:3:8.94:108,9,0	1/1:10,16:26:49.11:888,49,0	1/1:4,0:9:21.10:144,21,0	0/1:7,0:8:13.94:14,0,19	1/1:2,0:12:18.59:137,19,0	1/1:3,0:4:0.46:29,0,0	0/1:3,0:4:0.78:33,0,1	1/1:1,0:3:5.91:44,6,0	1/1:1,0:8:11.59:113,12,0	1/1:2,0:4:7:61,7,0	0/1:17,0:18:29.78:41,0,30	0/1:3,0:16:1.21:73,0,1	1/1:7,12:20:49.23:644,49,0	1/1:3,9:13:30.09:422,30,0	1/1:3,3:6:6.02:96,6,0	1/1:0,0:2:3.01:31,3,0	1/1:1,0:1:1.25:3,1,0	0/1:2,0:5:21.22:21,0,30	0/0:13,0:13:27.05:0,27,305	1/1:8,0:9:11.52:113,12,0	0/1:6,0:5:3.72:34,0,4	1/1:5,0:10:18.51:130,19,0
chr10	13100331	.	A	AATTTTTT	2174.95	PASS	AB=0.923;AC=22;AF=0.393;AN=56;BaseQRankSum=2.077;DP=393;FS=8.929;HRun=0;HaplotypeScore=115.9868;InbreedingCoeff=-0.3493;MQ=43.28;MQ0=35;MQRankSum=-5.725;QD=8.18;ReadPosRankSum=1.550;VQSLOD=1.5550;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:12:36.12:0,36,900	1/1:3,0:4:8.99:109,9,0	0/1:58,0:13:15.93:16,0,291	0/0:64,0:6:1.36:0,1,115	0/0:8,0:6:10.27:0,10,201	0/0:14,0:13:1.90:0,2,519	1/1:5,0:3:1.55:4,2,0	0/1:34,0:30:99:310,0,888	0/1:7,0:10:99:161,0,142	0/1:9,0:9:8.66:9,0,277	0/1:10,0:10:9.78:10,0,138	0/1:3,1:4:47.84:60,0,48	1/1:2,0:5:7.16:168,7,0	0/0:4,0:3:3.47:0,3,11	0/0:7,0:7:7:0,7,142	0/1:8,0:7:49.20:49,0,86	0/1:15,2:17:99:198,0,410	0/1:16,1:15:99:373,0,173	0/1:19,0:23:99:316,0,691	0/1:12,0:12:69.35:69,0,373	0/1:7,0:6:61.46:61,0,105	0/0:1,0:1:2.88:0,3,15	0/0:1,0:1:3.01:0,3,72	0/1:6,0:6:13.70:14,0,102	0/0:11,0:12:27.09:0,27,674	0/1:15,0:11:99:135,0,162	0/1:1,0:3:11.36:82,0,11	0/1:9,1:10:99:184,0,137
chr10	13100339	.	C	CTTTTTTT	5136.27	PASS	AB=0.853;AC=45;AF=0.804;AN=56;BaseQRankSum=1.518;DP=398;FS=1.935;HRun=16;HaplotypeScore=98.1451;InbreedingCoeff=0.3418;MQ=39.31;MQ0=49;MQRankSum=-4.461;QD=16.84;ReadPosRankSum=-0.214;VQSLOD=1.2626;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:13:18.76:0,19,340	1/1:4,0:4:12.04:181,12,0	1/1:56,0:12:2.94:19,3,0	0/0:61,0:6:3.46:0,3,16	0/1:4,5:10:42.30:88,0,42	1/1:13,0:13:18.74:159,19,0	1/1:3,0:1:2.04:6,2,0	0/1:30,0:26:18.27:488,0,18	1/1:11,0:9:14.99:268,15,0	0/1:6,5:10:10.81:270,0,11	1/1:10,0:9:6:78,6,0	1/1:4,0:4:9.03:152,9,0	1/1:6,0:5:12.04:284,12,0	1/1:3,0:2:0.47:1,0,0	1/1:11,0:9:15:194,15,0	1/1:7,0:6:15.02:264,15,0	1/1:15,0:13:12.04:327,12,0	1/1:20,0:14:24.94:517,25,0	1/1:23,0:23:34.76:611,35,0	1/1:12,0:10:12.04:232,12,0	1/1:6,0:4:3.01:48,3,0	1/1:1,0:1:1.55:4,2,0	0/1:2,0:1:0:0,0,0	0/1:8,0:8:24.16:24,0,41	0/0:11,0:13:23.92:0,24,336	1/1:9,0:12:27.09:534,27,0	1/1:7,0:5:11.97:174,12,0	1/1:10,0:6:12.01:212,12,0
chr10	13100589	.	C	CT	1212.35	PASS	AB=0.818;AC=14;AF=0.250;AN=56;BaseQRankSum=-6.112;DP=433;FS=4.171;HRun=12;HaplotypeScore=52.2701;InbreedingCoeff=0.5561;MQ=62.22;MQ0=1;MQRankSum=0.329;QD=8.98;ReadPosRankSum=-0.430;VQSLOD=2.2440;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:41:76.35:0,76,553	0/0:7,0:7:14.90:0,15,109	0/0:12,0:11:11.78:0,12,77	0/0:7,0:5:8.94:0,9,65	0/1:14,1:15:0.15:0,0,151	1/1:3,14:17:42.07:409,42,0	1/1:1,9:10:14.94:130,15,0	1/1:8,15:25:20.58:303,21,0	0/0:19,0:19:35.71:0,36,261	0/1:8,1:9:17.17:17,0,53	0/0:9,0:10:16.90:0,17,115	0/0:10,0:11:13.91:0,14,93	0/1:11,3:14:23.49:23,0,168	0/0:14,0:14:29.74:0,30,219	0/0:25,0:25:53.58:0,54,392	0/0:16,1:18:9.90:0,10,236	0/0:15,0:15:41.72:0,42,303	0/0:23,1:24:22.01:0,22,318	1/1:11,5:17:6.96:192,7,0	1/1:2,4:5:6.01:58,6,0	0/1:8,14:22:45.57:250,0,46	0/0:3,0:3:5.84:0,6,35	0/0:5,0:5:11.92:0,12,87	0/0:16,0:16:31.41:0,31,220	0/0:17,2:19:12.52:0,13,255	0/0:18,0:18:29.77:0,30,219	0/0:20,0:20:38.64:0,39,281	0/0:13,0:12:14.38:0,14,108
chr10	13103836	.	T	TAC	9029.45	PASS	AB=0.668;AC=34;AF=0.607;AN=56;BaseQRankSum=-3.448;DP=615;FS=3.399;HRun=0;HaplotypeScore=115.3982;InbreedingCoeff=0.5457;MQ=60.90;MQ0=6;MQRankSum=1.508;QD=23.45;ReadPosRankSum=1.711;VQSLOD=5.3696;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:41:77.64:0,78,803	1/1:5,5:10:21.07:311,21,0	0/0:27,0:16:2.80:0,3,13	0/0:45,0:22:9.02:0,9,95	0/1:9,14:23:1.21:418,0,1	1/1:8,14:23:8.55:549,9,0	1/1:6,15:23:22.86:661,23,0	0/0:7,0:29:19.29:0,19,180	0/1:6,5:11:10.27:276,0,10	0/1:16,16:31:13.70:560,0,14	0/1:8,9:17:1.77:214,0,2	1/1:6,3:9:15.05:232,15,0	1/1:7,10:17:24.08:370,24,0	1/1:10,4:14:21.02:274,21,0	1/1:8,10:18:30.10:463,30,0	0/1:4,4:9:16.28:194,0,16	1/1:10,19:32:28.84:831,29,0	0/1:14,7:20:36.03:315,0,36	0/0:11,0:16:17.21:0,17,105	0/0:9,0:12:14.04:0,14,67	0/0:13,0:42:36.40:0,36,180	1/1:10,13:23:54.17:807,54,0	1/1:13,4:17:24.07:347,24,0	1/1:10,30:41:28.88:892,29,0	0/0:17,0:17:33.02:0,33,359	1/1:12,9:21:5.68:469,6,0	1/1:6,9:14:39.10:573,39,0	1/1:3,4:7:18.06:276,18,0
chr10	13103900	.	T	TACACACAC	5381.63	PASS	AB=0.978;AC=23;AF=0.411;AN=56;BaseQRankSum=6.401;DP=534;FS=39.587;HRun=0;HaplotypeScore=182.1136;InbreedingCoeff=-0.5410;MQ=49.85;MQ0=8;MQRankSum=-7.477;QD=14.24;ReadPosRankSum=-0.954;VQSLOD=2.6972;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:90.25:0,90,2159	0/1:10,0:10:11.54:360,0,12	0/0:32,0:12:2.21:0,2,310	0/0:37,0:12:35.95:0,36,522	0/1:17,0:17:3.38:3,0,257	0/0:11,0:11:29.98:0,30,584	0/0:22,0:22:52.50:0,53,1153	0/1:23,0:20:98.17:98,0,582	0/1:14,0:14:99:194,0,143	0/1:21,0:22:99:184,0,485	0/1:15,0:15:59.81:60,0,60	1/1:13,0:12:20.93:543,21,0	0/1:14,0:14:96.06:367,0,96	0/1:11,0:10:60.50:61,0,63	0/1:20,0:20:99:441,0,126	0/1:9,0:9:63.70:234,0,64	0/1:23,0:23:99:294,0,308	0/1:12,0:12:89.59:440,0,90	0/1:14,0:13:99:221,0,383	0/1:18,0:18:99:298,0,114	0/1:35,0:35:28.73:29,0,292	0/1:14,0:14:65.60:66,0,279	0/1:8,3:14:8.83:9,0,98	0/1:35,0:35:99:179,0,296	0/0:17,0:17:51.13:0,51,1066	0/1:17,0:17:99:307,0,343	0/1:20,0:19:99:694,0,170	0/1:6,1:7:63.82:301,0,64
chr10	13103901	.	G	GCACACACACA	11369.30	PASS	AB=1.000;AC=45;AF=0.833;AN=54;BaseQRankSum=-2.931;DP=574;FS=9.162;HRun=0;HaplotypeScore=190.2795;InbreedingCoeff=0.6905;MQ=49.09;MQ0=8;MQRankSum=-4.703;QD=25.15;ReadPosRankSum=-3.582;VQSLOD=2.3534;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:37:60.20:0,60,1659	1/1:8,1:10:18.06:668,18,0	0/1:33,0:11:43.34:43,0,45	./.	1/1:16,1:17:5.85:72,6,0	0/0:6,0:11:16.61:0,17,344	0/0:11,0:22:18.59:0,19,663	1/1:25,0:22:21.06:321,21,0	1/1:9,5:18:9.34:448,9,0	1/1:23,0:23:24.08:537,24,0	1/1:12,3:15:8.25:148,8,0	1/1:8,5:16:20.63:927,21,0	1/1:8,4:13:18.06:647,18,0	1/1:10,4:20:6.02:222,6,0	1/1:10,8:25:24.10:959,24,0	1/1:5,3:11:12.51:500,13,0	1/1:21,1:23:24.08:761,24,0	1/1:10,2:12:24.08:672,24,0	1/1:13,0:13:12.04:308,12,0	1/1:4,0:22:15.05:386,15,0	1/1:35,0:36:11.30:157,11,0	1/1:12,1:13:6.02:192,6,0	1/1:14,0:14:2.52:45,3,0	1/1:33,1:35:26.73:509,27,0	0/0:17,0:17:23.63:0,24,653	1/1:10,6:26:48.16:1332,48,0	1/1:12,6:20:30.10:1156,30,0	1/1:5,2:7:9.03:357,9,0
chr10	13104306	.	CTTCTTTCTTTCTTTCTTTCTTTCT	C	9124.71	PASS	AB=1.000;AC=47;AF=0.870;AN=54;BaseQRankSum=0.927;DP=583;FS=6.507;HRun=0;HaplotypeScore=248.3632;InbreedingCoeff=0.6009;MQ=60.37;MQ0=1;MQRankSum=-2.319;QD=18.43;ReadPosRankSum=3.994;VQSLOD=2.9453;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:29:33.05:0,33,2458	1/1:5,0:5:8.84:56,9,0	0/0:6,0:4:2.99:0,3,24	0/1:14,0:11:1.82:2,0,8	1/1:2,19:21:23.77:413,24,0	1/1:5,16:21:6.02:245,6,0	1/1:15,0:15:11.87:198,12,0	1/1:33,0:32:44.94:397,45,0	1/1:5,14:19:9.03:559,9,0	1/1:6,8:14:20.64:227,21,0	1/1:3,17:20:23.78:452,24,0	1/1:4,12:16:6.02:369,6,0	1/1:3,16:19:15.05:883,15,0	1/1:2,16:18:12.04:671,12,0	1/1:5,19:24:3.01:189,3,0	1/1:3,19:22:5.16:369,5,0	1/1:33,0:33:59.56:588,60,0	1/1:8,0:8:14.74:107,15,0	1/1:18,0:18:20.50:191,21,0	1/1:6,20:26:29.83:562,30,0	1/1:21,0:21:35.70:400,36,0	1/1:3,9:12:4.52:173,5,0	1/1:4,17:21:5.41:84,5,0	./.	0/0:9,0:28:39.11:0,39,3167	1/1:9,20:29:53.66:777,54,0	1/1:4,22:26:14.37:837,14,0	1/1:18,22:40:6.02:378,6,0
chr10	13106358	.	G	GAC	13342.06	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-12.112;DP=540;FS=4.062;HRun=0;HaplotypeScore=63.2339;InbreedingCoeff=0.9585;MQ=62.35;MQ0=1;MQRankSum=1.922;QD=41.82;ReadPosRankSum=4.658;VQSLOD=6.6334;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:84.24:0,84,1084	1/1:2,11:13:36.12:622,36,0	0/0:6,0:5:12.02:0,12,132	0/0:5,0:5:3:0,3,29	1/1:3,24:28:69.24:1192,69,0	0/0:14,0:14:39.13:0,39,519	0/0:26,0:26:69.21:0,69,901	0/0:27,0:27:75.21:0,75,955	1/1:2,8:11:27.09:443,27,0	1/1:3,24:27:72.21:1161,72,0	1/1:0,17:17:48.16:831,48,0	1/1:1,15:16:45.15:779,45,0	1/1:2,7:10:18.06:312,18,0	1/1:1,9:10:21.07:363,21,0	1/1:0,15:15:39.13:673,39,0	1/1:3,13:16:36.12:619,36,0	1/1:3,21:26:48.36:926,48,0	1/1:1,25:26:69.24:1183,69,0	0/0:22,0:22:57.12:0,57,709	0/0:17,0:17:48.14:0,48,624	0/0:52,0:52:99:0,141,1834	1/1:1,12:13:30.10:519,30,0	1/1:2,22:24:60.07:1039,60,0	1/1:5,18:23:48.16:831,48,0	0/0:17,0:17:51.17:0,51,677	1/1:2,18:20:57.19:967,57,0	1/1:3,16:18:42.14:727,42,0	1/1:1,3:4:9.03:156,9,0
chr10	13106456	.	A	AG	1394.30	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=1.969;DP=429;FS=7.132;HRun=1;HaplotypeScore=82.7200;InbreedingCoeff=0.7893;MQ=49.73;MQ0=4;MQRankSum=-1.223;QD=12.45;ReadPosRankSum=-1.353;VQSLOD=1.4716;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:58.18:0,58,487	0/0:8,0:8:13.99:0,14,142	0/0:11,0:8:19.66:0,20,116	0/0:5,0:3:3.48:0,3,34	0/0:9,0:10:11.86:0,12,63	0/0:9,0:9:10.44:0,10,63	0/0:21,0:20:14.81:0,15,97	1/1:7,18:25:60.42:571,60,0	0/0:9,0:9:14.49:0,14,102	0/0:17,0:16:30.35:0,30,237	0/0:12,0:13:21.39:0,21,179	0/0:12,0:12:21.06:0,21,117	0/0:5,0:5:8.69:0,9,48	0/0:12,0:12:10.86:0,11,59	0/0:11,0:11:14.56:0,15,133	0/0:12,0:12:20.57:0,21,159	0/0:31,0:30:41.34:0,41,345	0/0:21,0:20:30.72:0,31,231	1/1:8,19:24:54.25:458,54,0	1/1:20,4:24:18.51:145,19,0	1/1:11,6:16:35.39:375,35,0	0/0:17,0:17:21.21:0,21,192	0/0:14,0:14:19.26:0,19,128	0/1:19,0:18:2.77:3,0,46	0/0:17,0:17:30.36:0,30,284	0/0:10,0:10:19.90:0,20,183	0/0:16,0:16:24.18:0,24,210	0/0:6,0:6:7.28:0,7,34
chr10	13106457	.	G	GGA	1422.30	PASS	AB=0.788;AC=20;AF=0.357;AN=56;BaseQRankSum=5.161;DP=475;FS=7.793;HRun=0;HaplotypeScore=103.7745;InbreedingCoeff=0.0162;MQ=50.25;MQ0=4;MQRankSum=0.148;QD=5.19;ReadPosRankSum=-6.072;VQSLOD=-0.2694;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:33:32.44:0,32,500	0/0:5,0:8:20.36:0,20,190	0/0:11,0:9:20.47:0,20,154	0/0:5,0:3:1.69:0,2,31	0/1:9,0:10:32.15:32,0,34	0/1:7,0:16:22.32:22,0,41	0/0:8,0:21:14.81:0,15,97	1/1:23,0:23:31.58:441,32,0	0/1:7,0:9:9.94:10,0,98	0/0:15,0:19:18.76:0,19,277	0/0:8,0:15:13.99:0,14,221	0/0:13,0:13:0.34:0,0,100	0/1:6,0:7:11.43:11,0,24	0/0:3,0:12:11.67:0,12,68	0/1:10,0:16:0.58:1,0,136	0/1:7,1:13:3.08:3,0,146	0/1:23,0:33:15.42:15,0,381	0/0:16,0:21:5.89:0,6,239	1/1:30,0:27:56.57:431,57,0	1/1:11,13:24:3.63:174,4,0	1/1:17,1:18:16.93:284,17,0	0/1:11,0:21:24.07:24,0,194	0/1:9,0:14:56.48:56,0,116	0/0:11,0:18:3.74:0,4,96	0/0:15,0:17:12.20:0,12,305	0/1:11,0:13:48.02:48,0,189	0/1:17,0:20:4.16:4,0,236	0/1:4,0:6:28.98:31,0,29
chr10	13106616	.	T	TC	567.42	PASS	AB=0.854;AC=13;AF=0.232;AN=56;BaseQRankSum=6.714;DP=453;FS=3.257;HRun=10;HaplotypeScore=67.0487;InbreedingCoeff=0.5902;MQ=76.53;MQ0=0;MQRankSum=-2.071;QD=4.47;ReadPosRankSum=-3.818;VQSLOD=-0.0086;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:41.95:0,42,478	0/0:9,0:9:5.97:0,6,49	0/1:15,0:14:6.07:6,0,86	0/0:21,0:19:13.07:0,13,120	0/0:17,0:17:20.92:0,21,166	0/1:10,2:12:5.49:46,0,5	1/1:15,1:16:10.52:96,11,0	1/1:17,4:21:5.24:161,5,0	0/0:9,1:12:28.02:0,28,207	0/0:14,0:14:14.90:0,15,121	0/0:9,0:9:8.94:0,9,71	0/1:7,5:12:49.92:111,0,50	0/0:9,0:9:14.94:0,15,120	0/0:16,0:18:37.96:0,38,298	0/0:18,0:19:43.96:0,44,347	0/0:15,0:15:26.95:0,27,222	0/0:32,0:32:89.86:0,90,733	0/0:16,1:17:25.41:0,25,219	1/1:10,8:17:8.43:238,8,0	1/1:12,0:12:2.61:24,3,0	1/1:21,0:21:8.58:44,9,0	0/0:12,0:12:26.94:0,27,219	0/0:12,0:12:20.89:0,21,162	0/0:20,0:20:50.90:0,51,413	0/0:20,0:21:43.22:0,43,328	0/0:13,0:13:14.92:0,15,117	0/0:16,0:16:35.90:0,36,290	0/0:8,0:8:14.96:0,15,123
chr10	13106920	.	T	TTCTCTCTCTCTCTCTC	8638.51	PASS	AB=0.968;AC=47;AF=0.870;AN=54;BaseQRankSum=-0.291;DP=639;FS=0.735;HRun=0;HaplotypeScore=274.9664;InbreedingCoeff=0.3676;MQ=64.12;MQ0=1;MQRankSum=-5.357;QD=15.94;ReadPosRankSum=-0.660;VQSLOD=3.4590;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:39:62.91:0,63,2043	1/1:11,0:11:3.01:75,3,0	./.	0/1:19,0:13:7.97:8,0,63	1/1:24,0:22:7.29:47,7,0	1/1:24,0:24:8.53:133,9,0	0/1:25,0:26:15.54:16,0,87	1/1:55,0:51:33.07:559,33,0	1/1:23,0:23:12.04:503,12,0	1/1:16,0:22:30.07:895,30,0	1/1:17,0:17:9.03:199,9,0	1/1:15,2:17:3.01:64,3,0	1/1:11,0:13:9.02:412,9,0	1/1:19,1:20:3.01:125,3,0	1/1:30,1:34:17.99:649,18,0	1/1:23,0:24:10.39:365,10,0	1/1:13,0:14:8.35:428,8,0	1/1:9,0:8:3.01:44,3,0	1/1:29,0:29:27.09:742,27,0	1/1:30,0:29:5.20:50,5,0	1/1:15,0:16:15.05:444,15,0	1/1:17,0:17:8.89:320,9,0	0/1:15,0:16:0:0,0,0	1/1:22,0:23:2.43:194,2,0	0/0:25,0:26:36.24:0,36,1336	1/1:23,6:29:33.10:1251,33,0	1/1:13,1:16:18.06:735,18,0	1/1:11,0:11:6.02:382,6,0
chr10	13106947	.	T	TCACACACACA	2948.30	PASS	AB=0.961;AC=21;AF=0.375;AN=56;BaseQRankSum=5.118;DP=574;FS=0.580;HRun=0;HaplotypeScore=172.8247;InbreedingCoeff=0.2060;MQ=43.41;MQ0=8;MQRankSum=-7.450;QD=11.25;ReadPosRankSum=4.079;VQSLOD=2.3369;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:39:15.38:0,15,2167	0/1:8,0:8:18.96:90,0,19	0/0:26,0:9:24.02:0,24,497	0/0:29,0:13:29.15:0,29,595	0/0:9,10:18:8.91:0,9,64	1/1:26,0:26:8.85:147,9,0	0/0:32,0:32:1.24:0,1,3	0/0:33,0:31:19.44:0,19,707	0/1:31,0:31:10.32:473,0,10	0/1:14,0:13:22.50:298,0,22	0/0:13,0:13:8.99:0,9,74	1/1:21,0:21:3.01:143,3,0	1/1:15,0:14:14.88:404,15,0	0/0:18,0:17:0.47:0,0,1	0/1:29,0:28:50.41:50,0,77	0/1:28,0:28:76.74:165,0,77	1/1:11,0:11:9.81:87,10,0	0/1:6,4:9:13.97:147,0,14	0/0:20,0:20:44:0,44,518	0/0:23,0:22:23.96:0,24,467	0/0:16,0:16:12.01:0,12,479	0/0:19,0:19:5.95:0,6,50	1/1:13,0:13:1.71:6,2,0	0/1:21,0:20:3.26:3,0,15	0/0:23,0:23:65.84:0,66,1710	0/1:14,1:15:4.40:778,0,4	0/1:17,0:17:68.93:193,0,69	1/1:3,0:3:6.02:133,6,0
chr10	13106949	.	T	TCACACACACACA	6767.91	PASS	AB=0.906;AC=37;AF=0.712;AN=52;BaseQRankSum=1.316;DP=665;FS=14.182;HRun=0;HaplotypeScore=214.8331;InbreedingCoeff=0.2682;MQ=43.05;MQ0=8;MQRankSum=-7.516;QD=12.82;ReadPosRankSum=-0.886;VQSLOD=2.7086;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:42:56:0,56,2398	1/1:10,0:10:6.02:202,6,0	0/0:27,0:10:18.06:0,18,508	0/0:30,0:14:24.08:0,24,633	0/1:23,0:21:0.01:0,0,1	1/1:4,0:30:8.90:249,9,0	1/1:5,0:38:2.94:18,3,0	0/1:32,0:30:99:208,0,389	1/1:6,0:36:15.52:772,16,0	1/1:20,0:19:36.03:863,36,0	./.	1/1:8,15:25:8.99:295,9,0	1/1:10,5:17:20.79:626,21,0	./.	1/1:18,13:38:5.83:110,6,0	1/1:9,16:30:8.64:310,9,0	1/1:7,5:13:1.30:153,1,0	0/1:14,1:14:24.82:284,0,25	0/1:20,0:20:6.45:6,0,258	0/1:21,0:20:3.92:4,0,381	0/1:19,0:19:45.78:46,0,334	0/1:8,13:23:0.03:0,0,0	0/1:9,0:19:0:0,0,1	1/1:7,0:25:2.82:18,3,0	0/1:23,0:24:16.52:17,0,1596	1/1:19,2:22:54.16:1586,54,0	1/1:12,5:21:20.90:689,21,0	1/1:4,0:4:12:311,12,0
chr10	13109171	.	A	AACCG	3945.72	PASS	AB=1.000;AC=39;AF=0.696;AN=56;BaseQRankSum=6.137;DP=600;FS=0.848;HRun=0;HaplotypeScore=93.8971;InbreedingCoeff=0.6519;MQ=77.17;MQ0=1;MQRankSum=-4.609;QD=9.62;ReadPosRankSum=0.682;VQSLOD=2.5480;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,103,1181	1/1:7,0:7:17.73:135,18,0	0/0:22,0:18:26.68:0,27,308	0/0:28,0:22:35.20:0,35,374	1/1:10,0:10:17.75:181,18,0	0/0:21,0:21:13.42:0,13,365	0/0:35,0:35:24.22:0,24,581	0/0:21,0:21:41.72:0,42,377	1/1:31,0:31:2.93:61,3,0	1/1:19,0:19:43.51:355,44,0	1/1:14,0:14:27.13:195,27,0	1/1:23,0:23:8.91:185,9,0	1/1:17,0:17:32.03:223,32,0	1/1:15,0:15:6.02:125,6,0	1/1:16,0:16:6.02:123,6,0	1/1:13,0:13:2.91:60,3,0	1/1:31,0:31:2.97:20,3,0	1/1:9,20:31:12.04:220,12,0	0/1:19,0:18:1.70:2,0,258	0/1:10,0:10:17.01:17,0,181	0/1:35,0:35:99:115,0,594	1/1:17,0:17:14.05:134,14,0	1/1:17,0:17:35.64:305,36,0	1/1:32,0:32:82.53:676,83,0	0/0:15,0:15:30.03:0,30,322	1/1:17,0:17:36.65:332,37,0	1/1:24,1:25:9.50:202,10,0	1/1:11,0:11:32.76:281,33,0
chr10	13109179	.	G	GACCGACCA	5869.82	PASS	AB=0.969;AC=41;AF=0.732;AN=56;BaseQRankSum=3.871;DP=607;FS=4.049;HRun=0;HaplotypeScore=119.2124;InbreedingCoeff=0.4357;MQ=70.51;MQ0=7;MQRankSum=-5.222;QD=11.93;ReadPosRankSum=-0.580;VQSLOD=3.4255;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,103,1494	1/1:7,0:7:17.74:201,18,0	0/0:20,0:15:26.68:0,27,308	0/0:22,0:16:35.20:0,35,374	1/1:10,0:10:25:236,25,0	0/1:21,0:21:95.01:95,0,349	0/1:35,0:35:99:157,0,519	0/0:18,0:16:40.28:0,40,369	1/1:3,30:37:2.90:130,3,0	1/1:19,0:19:52.53:461,53,0	1/1:14,0:14:36.11:268,36,0	1/1:2,23:29:8.99:391,9,0	1/1:14,0:14:38.04:297,38,0	1/1:0,14:18:6.02:262,6,0	1/1:0,13:17:6.91:263,7,0	1/1:0,13:15:2.94:129,3,0	1/1:2,31:35:2.97:20,3,0	1/1:28,0:28:18.03:373,18,0	0/1:24,0:20:52.76:53,0,249	0/1:13,0:12:88.86:89,0,174	0/1:31,0:37:59.58:60,0,593	1/1:5,14:22:22.23:236,22,0	1/1:15,0:15:35.55:355,36,0	1/1:29,0:29:82.60:752,83,0	0/0:5,0:14:30.04:0,30,461	1/1:16,0:15:37.90:424,38,0	1/1:4,18:23:12.47:315,12,0	1/1:12,0:12:35.75:305,36,0
chr10	13110208	.	GACAGC	G	2178.07	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.385;DP=578;FS=0.637;HRun=0;HaplotypeScore=110.5389;InbreedingCoeff=0.9959;MQ=95.16;MQ0=0;MQRankSum=-9.918;QD=57.32;ReadPosRankSum=0.224;VQSLOD=3.6716;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,99,2951	0/0:8,0:8:21.07:0,21,658	0/0:31,0:31:89.67:0,90,2577	0/0:25,0:25:66.18:0,66,1759	0/0:17,0:17:48.16:0,48,1455	1/1:0,14:14:42.14:894,42,0	1/1:2,22:24:66.23:1405,66,0	0/0:30,0:30:87.29:0,87,2656	0/0:19,0:19:57.20:0,57,1756	0/0:22,0:22:63.21:0,63,1905	0/0:9,0:9:27.09:0,27,819	0/0:12,0:12:36.12:0,36,1124	0/0:15,0:15:45.15:0,45,1401	0/0:14,0:14:39.13:0,39,1178	0/0:27,0:27:78.27:0,78,2444	0/0:17,0:17:51.18:0,51,1594	0/0:42,0:42:99:0,126,3798	0/0:29,0:29:78.27:0,78,2440	0/0:18,0:18:54.16:0,54,1591	0/0:13,0:13:39.13:0,39,1222	0/0:38,0:38:99:0,111,3397	0/0:13,0:13:36.12:0,36,1097	0/0:13,0:13:36.12:0,36,1106	0/0:33,0:33:87.30:0,87,2726	0/0:14,0:14:42.14:0,42,1289	0/0:9,0:9:24.08:0,24,701	0/0:25,0:25:75.26:0,75,2317	0/0:11,0:11:33.11:0,33,1033
chr10	13111850	.	CT	C	2611.80	PASS	AB=0.784;AC=37;AF=0.685;AN=54;BaseQRankSum=5.600;DP=383;FS=0.575;HRun=13;HaplotypeScore=43.8605;InbreedingCoeff=0.6419;MQ=72.94;MQ0=7;MQRankSum=-2.191;QD=11.31;ReadPosRankSum=4.184;VQSLOD=2.8930;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,1:26:44.31:0,44,577	./.	0/0:35,0:13:15.05:0,15,128	0/0:36,0:13:13.44:0,13,82	1/1:4,2:7:10.97:72,11,0	1/1:2,11:13:32.78:241,33,0	1/1:3,8:11:20.87:153,21,0	0/0:26,2:28:7.24:0,7,384	1/1:5,7:12:14.41:108,14,0	1/1:4,5:9:11.90:88,12,0	0/1:2,0:3:0.84:1,0,24	1/1:2,10:12:32.78:238,33,0	0/1:5,3:8:15.90:16,0,21	1/1:6,5:12:22.71:150,23,0	1/1:3,7:10:17.88:131,18,0	1/1:2,5:7:14.91:109,15,0	1/1:4,19:24:55.94:393,56,0	1/1:6,11:18:34.81:246,35,0	0/1:12,2:14:14.90:15,0,174	0/0:5,0:5:15.01:0,15,140	0/0:13,1:14:1.79:0,2,158	1/1:2,5:7:11.92:88,12,0	1/1:3,7:10:17.89:131,18,0	1/1:4,16:21:42.84:296,43,0	0/0:6,0:6:9:0,9,83	1/1:8,9:17:0.61:168,1,0	1/1:3,7:10:14.91:109,15,0	1/1:3,2:5:5.94:44,6,0
chr10	13111973	.	C	CTTAT	2401.09	PASS	AB=0.707;AC=19;AF=0.633;AN=30;BaseQRankSum=-2.905;DP=222;FS=0.000;HRun=0;HaplotypeScore=42.4051;InbreedingCoeff=0.2711;MQ=63.87;MQ0=4;MQRankSum=0.000;QD=21.63;ReadPosRankSum=-0.285;VQSLOD=2.6844;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:9.03:0,9,140	1/1:4,0:4:3.01:57,3,0	./.	./.	1/1:7,0:7:3:25,3,0	0/1:4,6:11:22.52:469,0,23	./.	0/0:24,0:23:9.01:0,9,117	1/1:4,0:4:3.01:65,3,0	1/1:4,2:6:6.02:141,6,0	./.	./.	./.	./.	1/1:7,2:9:3.01:71,3,0	./.	0/1:17,7:24:4.46:859,0,4	1/1:10,8:17:18.06:424,18,0	0/0:16,0:15:12.04:0,12,183	./.	./.	./.	./.	./.	0/0:8,0:8:6.02:0,6,93	1/1:6,1:7:3.01:71,3,0	1/1:5,2:7:6.02:141,6,0	0/1:9,5:14:60.15:198,0,60
chr10	13112189	.	G	GA	435	PASS	AB=0.838;AC=10;AF=0.179;AN=56;BaseQRankSum=-2.516;DP=394;FS=0.788;HRun=10;HaplotypeScore=64.4155;InbreedingCoeff=0.2508;MQ=62.63;MQ0=11;MQRankSum=-3.486;QD=4.48;ReadPosRankSum=-2.054;VQSLOD=0.1335;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:38:68.59:0,69,530	0/0:4,0:4:8.99:0,9,74	0/0:22,0:9:7.69:0,8,39	0/1:11,0:3:3.10:3,0,14	0/0:6,0:6:11.95:0,12,98	0/0:12,0:10:23.95:0,24,196	0/1:23,1:21:10.35:10,0,168	0/1:10,10:15:4.09:186,0,4	0/0:11,0:11:20.71:0,21,172	0/0:11,0:11:20.96:0,21,170	0/0:4,0:4:5.96:0,6,49	0/0:17,0:17:26.78:0,27,208	0/0:15,0:15:26.88:0,27,214	0/0:7,0:7:2.85:0,3,24	0/0:19,0:19:35.81:0,36,281	0/0:13,0:13:32.95:0,33,269	0/0:27,1:26:12.90:0,13,312	0/0:22,1:24:5.30:0,5,228	0/1:8,5:10:6.75:115,0,7	1/1:3,4:6:12.03:128,12,0	1/1:5,5:9:11.90:100,12,0	0/1:4,1:5:17.84:18,0,66	0/1:4,1:5:19.70:20,0,59	0/0:18,1:19:35.86:0,36,295	0/0:5,0:5:14.74:0,15,105	0/0:13,1:14:0.96:0,1,214	0/0:19,0:18:47.89:0,48,387	0/0:7,0:6:11.98:0,12,98
chr10	13112203	.	C	CA	552.55	PASS	AB=0.841;AC=13;AF=0.232;AN=56;BaseQRankSum=1.017;DP=421;FS=11.830;HRun=12;HaplotypeScore=53.5782;InbreedingCoeff=0.2214;MQ=67.07;MQ0=11;MQRankSum=-1.505;QD=4.09;ReadPosRankSum=-1.760;VQSLOD=-0.3368;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,1:32:42.56:0,43,407	0/0:2,0:3:5.01:0,5,28	0/0:27,0:13:11.50:0,11,78	0/1:15,0:6:12.94:16,0,13	0/0:7,0:7:14.91:0,15,109	1/1:5,1:10:11.80:90,12,0	1/1:7,2:21:34.73:214,35,0	0/1:16,6:18:26.47:96,0,26	0/1:11,0:12:15.29:15,0,57	0/0:7,0:8:13.93:0,14,93	0/0:6,0:6:8.81:0,9,59	0/0:17,0:18:27.87:0,28,176	0/0:18,0:19:39.56:0,40,268	0/1:7,2:10:59.94:60,0,64	0/0:19,0:21:37.70:0,38,259	0/0:13,0:14:31.79:0,32,222	0/0:23,0:24:50.72:0,51,338	0/0:22,0:22:38.70:0,39,284	0/1:12,5:14:46.69:94,0,47	1/1:5,3:7:3.89:31,4,0	0/1:7,3:9:12.90:49,0,13	0/0:5,0:5:5.46:0,5,31	0/0:5,0:6:10.98:0,11,72	0/0:18,0:20:35.58:0,36,231	0/1:3,2:5:12.90:49,0,13	0/0:18,1:20:11.56:0,12,238	0/0:19,0:21:39.62:0,40,233	0/0:7,0:7:17.87:0,18,131
chr10	13113150	.	ATG	A	2950.05	PASS	AB=1.000;AC=25;AF=0.500;AN=50;BaseQRankSum=-1.877;DP=682;FS=16.907;HRun=0;HaplotypeScore=169.3527;InbreedingCoeff=0.1764;MQ=43.86;MQ0=33;MQRankSum=0.518;QD=6.97;ReadPosRankSum=-1.062;VQSLOD=2.1314;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,1:37:6.55:0,7,959	0/0:8,0:8:3.74:0,4,12	0/0:42,0:6:4.25:0,4,36	0/0:62,0:7:9:0,9,108	0/0:14,0:12:2.99:0,3,23	1/1:5,0:22:22.73:112,23,0	1/1:4,0:24:16.36:83,16,0	1/1:14,17:26:47.89:524,48,0	0/1:20,0:19:19.99:24,0,20	0/1:26,0:25:15.79:16,0,29	./.	0/1:24,0:22:10.97:11,0,29	0/1:16,0:13:9.64:10,0,25	0/0:17,0:17:3.72:0,4,33	0/0:22,0:22:9.89:0,10,61	0/1:14,0:13:9.04:9,0,18	0/1:24,0:21:11.56:12,0,51	0/1:19,0:16:4.21:4,0,54	1/1:15,5:16:16.67:234,17,0	1/1:3,15:19:29.92:340,30,0	1/1:41,44:86:99:1696,151,0	./.	1/1:11,0:10:2.74:12,3,0	1/1:20,0:17:0.27:13,0,0	0/0:21,0:21:36.12:0,36,575	0/1:29,0:27:11.44:11,0,28	0/1:12,0:12:1.95:2,0,50	./.
chr10	13113158	.	GTGTGTGTGTGTGCGTGTATGTGTGTGTGTTGTGTGTGTTGTGTGTGTGTTGTGTGTGTGT	G	16357.80	PASS	AB=1.000;AC=26;AF=0.542;AN=48;BaseQRankSum=-0.889;DP=725;FS=0.873;HRun=0;HaplotypeScore=659.1383;InbreedingCoeff=0.7353;MQ=41.91;MQ0=45;MQRankSum=-9.300;QD=63.65;ReadPosRankSum=5.132;VQSLOD=-0.2690;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:59.66:0,60,4439	1/1:6,0:6:6.02:278,6,0	0/0:55,0:3:3.48:0,3,86	0/0:77,0:6:15.05:0,15,315	1/1:4,13:15:3.01:92,3,0	0/0:25,0:24:33.11:0,33,2120	0/0:29,0:29:46.02:0,46,2122	0/0:37,0:32:75.14:0,75,1969	1/1:17,0:16:5.20:1796,5,0	1/1:4,24:27:38.15:1427,38,0	./.	1/1:24,0:20:45.11:2171,45,0	1/1:15,0:12:29.93:1139,30,0	1/1:17,0:16:30.53:1099,31,0	1/1:20,0:20:39.09:1801,39,0	1/1:11,0:10:18.05:844,18,0	0/1:23,0:20:99:1240,0,155	0/1:21,0:17:99:1505,0,158	0/0:19,0:13:32.90:0,33,1379	0/0:17,0:17:36.12:0,36,1760	0/0:97,0:94:99:0,187,12321	./.	./.	1/1:19,0:16:14:318,14,0	0/0:24,0:24:44.88:0,45,2291	1/1:7,20:25:34.85:1240,35,0	1/1:12,0:12:30.10:1406,30,0	./.
chr10	13113162	.	G	GTGTGT	9364.03	PASS	AB=0.696;AC=29;AF=0.580;AN=50;BaseQRankSum=9.101;DP=736;FS=3.780;HRun=0;HaplotypeScore=177.8692;InbreedingCoeff=0.8676;MQ=41.24;MQ0=50;MQRankSum=-9.090;QD=36.15;ReadPosRankSum=3.992;VQSLOD=4.9274;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:36:67.50:0,67,1602	1/1:3,1:4:9:182,9,0	0/0:65,0:3:9.01:0,9,104	0/0:85,0:5:15.05:0,15,234	1/1:16,0:15:3.01:31,3,0	0/0:25,0:24:26.43:0,26,407	0/0:30,0:30:38.90:0,39,490	0/0:40,0:32:76.80:0,77,978	1/1:13,3:16:37.99:1115,38,0	1/1:29,0:27:33.02:860,33,0	./.	1/1:21,2:19:45.11:1148,45,0	1/1:15,0:12:29.97:706,30,0	1/1:18,0:16:30.03:686,30,0	1/1:16,3:19:38.27:929,38,0	1/1:10,0:10:18.04:414,18,0	1/1:19,3:20:19.66:739,20,0	1/1:16,2:16:36.59:937,37,0	0/0:15,0:12:32.89:0,33,366	0/0:18,0:18:30.10:0,30,386	0/0:102,0:99:99:0,171,2556	./.	1/1:9,0:7:2.94:18,3,0	0/1:9,3:13:2.96:253,0,3	0/0:23,0:23:45.14:0,45,846	1/1:25,0:24:30.43:637,30,0	1/1:9,0:11:30.10:709,30,0	./.
chr10	13113166	.	G	GT	3153.67	PASS	AB=0.967;AC=22;AF=0.440;AN=50;BaseQRankSum=10.354;DP=739;FS=0.885;HRun=1;HaplotypeScore=165.7866;InbreedingCoeff=0.5884;MQ=39.75;MQ0=54;MQRankSum=-8.162;QD=14.08;ReadPosRankSum=2.805;VQSLOD=3.4104;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:35:95.05:0,95,1119	1/1:3,0:3:8.95:86,9,0	0/0:72,0:4:9.02:0,9,105	0/0:91,0:5:15.05:0,15,188	0/0:17,0:15:2.96:0,3,19	0/0:22,0:21:30.99:0,31,213	0/0:31,0:31:36.99:0,37,328	0/0:39,0:31:81.76:0,82,696	1/1:16,1:17:34.02:380,34,0	1/1:28,0:24:32.92:346,33,0	./.	1/1:23,2:19:44.90:449,45,0	1/1:15,1:13:29.80:287,30,0	1/1:19,1:18:32.79:379,33,0	1/1:17,0:17:15.61:281,16,0	1/1:7,1:7:1.66:114,2,0	0/1:17,2:17:16.80:236,0,17	0/1:19,0:15:36.06:223,0,36	0/0:17,0:13:31.81:0,32,223	0/0:20,0:19:31.32:0,31,174	0/0:102,0:99:99:0,223,1646	./.	0/0:8,0:7:2.04:0,2,6	0/1:15,0:12:1.16:126,0,1	0/0:22,0:22:46.95:0,47,574	1/1:24,0:23:2.39:219,2,0	0/1:10,0:10:7.13:210,0,7	./.
chr10	13113167	.	TG	T	2584.89	PASS	AB=0.708;AC=23;AF=0.460;AN=50;BaseQRankSum=11.823;DP=732;FS=0.985;HRun=1;HaplotypeScore=161.8088;InbreedingCoeff=0.4666;MQ=39.48;MQ0=54;MQRankSum=-7.810;QD=11.29;ReadPosRankSum=3.070;VQSLOD=2.2422;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:35:86.73:0,87,1273	1/1:1,1:2:5.97:45,6,0	0/0:73,0:4:9.02:0,9,115	0/0:93,0:5:15.05:0,15,207	0/0:14,2:14:3.01:0,3,35	0/0:22,0:21:12.80:0,13,118	0/0:31,0:31:28.40:0,28,310	0/0:39,0:31:45.90:0,46,549	1/1:9,9:17:30.16:323,30,0	1/1:28,0:24:32.86:315,33,0	./.	1/1:13,12:19:15.88:346,16,0	1/1:10,6:13:29.78:251,30,0	1/1:8,10:17:1.15:214,1,0	1/1:7,9:16:16.59:270,17,0	0/1:4,4:7:16.52:116,0,17	0/1:12,8:17:52.82:209,0,53	0/1:9,9:15:73.46:164,0,73	0/0:16,0:12:19.94:0,20,129	0/0:19,0:18:14.67:0,15,63	0/0:101,0:98:99:0,132,1068	./.	1/1:8,1:7:2.04:6,2,0	1/1:8,6:11:13.68:118,14,0	0/0:21,0:21:52.97:0,53,757	0/1:23,2:23:18.02:193,0,18	0/1:2,8:10:28.04:198,0,28	./.
chr10	13113169	.	TGC	T	1667.71	PASS	AB=0.982;AC=27;AF=0.540;AN=50;BaseQRankSum=8.651;DP=728;FS=8.804;HRun=0;HaplotypeScore=170.6634;InbreedingCoeff=0.2306;MQ=39.25;MQ0=53;MQRankSum=-3.891;QD=4.15;ReadPosRankSum=3.109;VQSLOD=2.1469;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,1:32:5.43:0,5,1138	1/1:2,0:2:4.74:16,5,0	0/0:76,0:4:9.17:0,9,68	0/0:91,0:4:8.24:0,8,86	0/0:16,0:14:3:0,3,26	0/0:22,0:21:22.71:0,23,107	0/0:32,0:32:43.24:0,43,269	0/1:40,0:31:99:171,0,212	1/1:18,0:17:19.15:143,19,0	1/1:28,1:25:25.61:146,26,0	./.	1/1:22,3:19:25.86:133,26,0	1/1:16,0:13:18.89:92,19,0	1/1:19,0:17:20.89:90,21,0	0/1:16,0:16:0.46:38,0,0	0/1:7,0:6:8.62:39,0,9	0/1:19,1:17:27.18:73,0,27	0/1:17,2:15:18.44:68,0,18	1/1:14,0:11:7.10:97,7,0	0/1:19,0:18:3.70:108,0,4	0/1:98,2:97:99:422,0,396	./.	1/1:8,1:7:2.74:12,3,0	1/1:14,0:11:10.94:44,11,0	0/0:20,1:21:51.06:0,51,798	0/1:25,0:23:6.44:74,0,6	0/1:10,0:10:10.55:69,0,11	./.
chr10	13113170	.	GCGTGTA	G	3787.72	PASS	AB=0.964;AC=32;AF=0.615;AN=52;BaseQRankSum=12.817;DP=725;FS=2.519;HRun=0;HaplotypeScore=191.8397;InbreedingCoeff=0.7732;MQ=39.22;MQ0=55;MQRankSum=-9.774;QD=13.82;ReadPosRankSum=0.868;VQSLOD=3.1901;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:32:57.16:0,57,2129	1/1:2,0:2:6.01:57,6,0	0/0:76,0:4:8.51:0,9,100	0/0:91,0:5:9.49:0,9,123	1/1:16,0:14:0.89:2,1,0	0/0:21,0:20:26.33:0,26,329	0/0:36,0:36:39.04:0,39,649	0/0:39,0:32:48.81:0,49,1173	1/1:11,6:16:38.84:466,39,0	1/1:29,0:25:33.23:362,33,0	./.	1/1:21,3:18:38.77:450,39,0	1/1:13,0:10:21.04:264,21,0	1/1:11,8:17:25.14:260,25,0	1/1:9,5:14:30.88:354,31,0	1/1:6,2:6:12.03:150,12,0	1/1:18,1:16:1.99:257,2,0	1/1:16,3:15:20.88:361,21,0	0/1:12,0:10:10.73:11,0,285	0/0:19,0:18:34.87:0,35,547	0/0:101,0:98:99:0,145,4099	0/1:23,0:21:0:0,0,0	1/1:9,0:7:2.84:14,3,0	1/1:11,3:11:13.27:165,13,0	0/0:21,0:21:51.16:0,51,1334	1/1:25,0:23:24.48:288,24,0	1/1:5,5:10:28.24:328,28,0	./.
chr10	13113174	.	G	GT	2603.98	PASS	AB=0.969;AC=21;AF=0.420;AN=50;BaseQRankSum=12.956;DP=758;FS=9.178;HRun=1;HaplotypeScore=161.0309;InbreedingCoeff=0.3264;MQ=38.37;MQ0=66;MQRankSum=-10.137;QD=11.22;ReadPosRankSum=5.409;VQSLOD=1.5802;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,1:34:46.65:0,47,1014	1/1:2,0:2:3:43,3,0	0/0:78,0:4:10.27:0,10,115	0/0:91,0:5:12.02:0,12,122	1/1:16,1:14:3.01:43,3,0	0/0:19,0:18:36.11:0,36,437	0/0:35,0:34:56.61:0,57,730	0/0:56,0:45:96.30:0,96,1216	0/1:15,1:15:2.44:288,0,2	0/1:33,0:26:43.71:197,0,44	./.	0/1:24,0:17:15.73:371,0,16	0/1:15,0:9:16.93:234,0,17	0/1:16,1:15:43.08:109,0,43	1/1:15,0:14:33.02:422,33,0	1/1:8,0:6:9.32:167,9,0	0/1:15,2:15:20.23:250,0,20	0/1:17,0:14:25.89:251,0,26	0/0:15,0:10:24.06:0,24,292	0/0:19,0:18:39.13:0,39,503	0/0:104,2:104:99:0,204,3061	./.	0/0:10,0:7:2.04:0,2,6	1/1:14,0:11:4.83:69,5,0	0/0:24,0:23:54.18:0,54,700	1/1:28,0:23:8.65:79,9,0	1/1:9,0:9:20.52:252,21,0	./.
chr10	13113175	.	TA	T	1883.77	PASS	AB=0.913;AC=22;AF=0.440;AN=50;BaseQRankSum=13.800;DP=748;FS=12.244;HRun=1;HaplotypeScore=164.9200;InbreedingCoeff=0.2538;MQ=38.32;MQ0=70;MQRankSum=-10.337;QD=8.08;ReadPosRankSum=4.564;VQSLOD=-0.1410;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,1:34:53.95:0,54,1269	1/1:1,1:2:2.98:23,3,0	0/0:78,0:4:10.27:0,10,129	0/0:93,0:5:12.03:0,12,155	1/1:16,0:14:3:28,3,0	0/0:18,0:17:36.10:0,36,545	0/0:35,0:34:55.62:0,56,907	0/0:56,0:46:99:0,120,1829	0/1:13,2:15:5.22:193,0,5	0/1:35,0:26:64.83:126,0,65	./.	0/1:18,3:15:16.80:246,0,17	0/1:12,1:8:25.81:130,0,26	0/1:17,0:14:45.96:73,0,46	1/1:10,4:13:32.91:288,33,0	1/1:6,2:6:9.08:101,9,0	0/1:11,2:13:26.96:182,0,27	0/1:9,5:14:48.78:242,0,49	0/0:16,0:10:27.09:0,27,416	0/0:19,0:18:39.13:0,39,618	0/0:107,0:104:99:0,214,3820	./.	1/1:10,0:7:2.04:6,2,0	1/1:6,7:11:10.69:77,11,0	0/0:23,0:22:54.18:0,54,861	0/1:27,1:23:25.50:112,0,25	1/1:6,2:8:23.89:228,24,0	./.
chr10	13113181	.	TG	T	1021.29	PASS	AB=0.882;AC=18;AF=0.360;AN=50;BaseQRankSum=12.184;DP=790;FS=1.686;HRun=1;HaplotypeScore=166.7379;InbreedingCoeff=0.0327;MQ=37.57;MQ0=90;MQRankSum=-9.549;QD=4.27;ReadPosRankSum=2.738;VQSLOD=0.6243;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:35:91.41:0,91,1351	1/1:1,0:1:2.98:21,3,0	0/0:74,0:4:9.03:0,9,134	0/0:78,0:2:6.02:0,6,96	0/0:17,0:15:3.01:0,3,31	0/0:19,0:17:39.13:0,39,605	0/0:39,0:37:65.79:0,66,1020	0/0:64,0:44:99:0,108,1675	0/1:13,3:15:23.65:128,0,24	0/1:39,0:27:99:131,0,105	./.	0/1:19,4:14:15.28:197,0,15	0/1:14,5:9:26.88:122,0,27	0/1:21,0:16:43.55:47,0,44	1/1:11,3:13:26.33:183,26,0	0/1:8,1:6:4.41:56,0,4	0/1:8,5:12:58.58:83,0,59	0/1:13,3:14:51.55:52,0,142	0/0:22,0:13:33.11:0,33,502	0/0:18,0:17:33.11:0,33,522	0/0:118,0:111:99:0,247,4101	./.	1/1:10,0:7:2.04:6,2,0	1/1:16,0:12:7.20:28,7,0	0/0:24,0:23:54.14:0,54,805	0/1:32,1:23:25.16:25,0,71	0/1:8,1:9:12.22:98,0,12	./.
chr10	13113184	.	GTGT	G	1107.66	PASS	AB=0.976;AC=21;AF=0.404;AN=52;BaseQRankSum=12.721;DP=811;FS=1.020;HRun=0;HaplotypeScore=185.5515;InbreedingCoeff=0.1822;MQ=37.16;MQ0=106;MQRankSum=-10.421;QD=4.09;ReadPosRankSum=1.763;VQSLOD=2.2736;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:33:65.81:0,66,1578	1/1:1,0:1:2.96:19,3,0	0/0:70,0:4:6.02:0,6,125	0/0:73,0:2:6.02:0,6,122	0/1:17,0:15:0:0,0,0	0/0:19,0:17:45.12:0,45,869	0/0:41,0:38:69.57:0,70,1449	0/0:68,0:43:99:0,99,2062	0/1:18,0:16:38.61:141,0,39	0/1:40,0:27:97.94:98,0,167	0/0:15,0:12:2.98:0,3,21	0/1:25,0:16:34.38:200,0,34	0/1:19,0:9:46.22:115,0,46	0/1:22,0:16:37.98:51,0,38	1/1:13,0:12:28.24:183,28,0	1/1:9,0:6:14.50:96,14,0	0/1:14,2:14:45.02:114,0,45	0/1:15,2:14:59.02:119,0,59	0/0:26,0:14:30.10:0,30,598	0/0:20,0:17:36.01:0,36,666	0/0:122,1:115:99:0,286,5824	./.	1/1:11,0:7:2.92:17,3,0	1/1:17,1:14:3.31:23,3,0	0/0:23,0:22:51.13:0,51,1001	0/1:36,0:23:17.99:18,0,60	1/1:9,0:9:9.99:78,10,0	./.
chr10	13113186	.	GT	G	1008.98	PASS	AB=0.867;AC=23;AF=0.426;AN=54;BaseQRankSum=12.730;DP=815;FS=0.501;HRun=2;HaplotypeScore=162.5943;InbreedingCoeff=0.1942;MQ=37.08;MQ0=115;MQRankSum=-10.540;QD=3.64;ReadPosRankSum=0.864;VQSLOD=0.2669;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,1:32:62.68:0,63,1108	1/1:0,1:1:2.94:18,3,0	0/0:66,0:3:6.02:0,6,90	0/0:71,0:2:6.02:0,6,81	0/1:17,0:15:0:0,0,0	0/0:20,0:18:48.13:0,48,677	0/0:42,0:39:72.61:0,73,1054	0/0:66,0:40:99:0,99,1439	0/1:14,4:16:31.98:127,0,32	0/1:43,0:27:81.18:81,0,119	0/0:15,0:12:2.98:0,3,21	0/1:18,7:16:12.79:195,0,13	0/1:13,6:9:23.92:118,0,24	0/1:22,0:16:20.74:48,0,21	1/1:8,5:12:28.87:177,29,0	1/1:8,2:6:12.39:92,12,0	0/1:11,6:14:24.31:103,0,24	0/1:10,6:13:39.55:107,0,40	0/0:28,0:14:30.10:0,30,435	0/0:21,0:17:38.97:0,39,521	0/0:123,0:115:99:0,289,4080	./.	1/1:11,0:7:2.04:6,2,0	1/1:11,7:14:2.24:8,2,0	0/0:24,0:22:51.13:0,51,719	0/1:36,1:23:9.88:10,0,42	1/1:7,2:8:7.68:69,8,0	1/1:1,0:1:2.90:16,3,0
chr10	13113195	.	GT	G	1373.65	PASS	AB=0.850;AC=22;AF=0.407;AN=54;BaseQRankSum=12.618;DP=820;FS=1.082;HRun=2;HaplotypeScore=159.5848;InbreedingCoeff=0.2107;MQ=37.74;MQ0=130;MQRankSum=-9.868;QD=5.30;ReadPosRankSum=-1.548;VQSLOD=-0.0399;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,1:34:55.82:0,56,1200	1/1:1,1:1:3.01:37,3,0	0/0:47,4:4:6.02:0,6,85	0/0:61,0:2:6.02:0,6,80	./.	0/0:22,0:19:51.14:0,51,718	0/0:44,0:39:91.39:0,91,1235	0/0:75,0:45:99:0,102,1449	0/1:8,7:14:59.92:207,0,60	0/1:44,0:27:47.61:48,0,118	0/0:17,0:12:6.02:0,6,90	0/1:22,7:19:16.89:202,0,17	0/1:17,3:10:29.28:68,0,29	0/1:14,6:14:98.78:132,0,99	1/1:6,7:12:23.86:252,24,0	1/1:8,3:6:14.83:151,15,0	0/1:13,3:13:24:126,0,24	0/1:12,3:12:31.11:97,0,31	0/0:37,0:18:28.30:0,28,595	0/0:20,0:16:40.35:0,40,560	0/0:131,1:123:99:0,313,4480	0/0:26,0:22:1.25:0,1,3	1/1:10,1:7:2.22:7,2,0	1/1:8,10:14:4.58:18,5,0	0/0:21,0:18:48.16:0,48,719	0/1:37,0:21:36.39:62,0,36	1/1:3,4:6:11.94:101,12,0	1/1:0,1:1:3.01:38,3,0
chr10	13113196	.	T	TG	1349.19	PASS	AB=0.952;AC=20;AF=0.370;AN=54;BaseQRankSum=12.209;DP=819;FS=0.000;HRun=1;HaplotypeScore=158.6262;InbreedingCoeff=0.1909;MQ=37.79;MQ0=131;MQRankSum=-9.706;QD=5.58;ReadPosRankSum=-2.407;VQSLOD=-0.5663;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:34:55.62:0,56,1119	1/1:3,0:2:4.83:42,5,0	0/0:47,0:3:6.02:0,6,82	0/0:61,0:3:6.02:0,6,80	./.	0/0:22,0:19:51.14:0,51,687	0/0:44,0:39:91.45:0,91,1176	0/0:76,0:46:99:0,102,1370	0/1:15,1:15:53.95:222,0,54	0/1:44,0:27:49.40:49,0,108	0/0:17,0:12:6.02:0,6,82	0/1:26,3:19:13.86:196,0,14	0/1:20,0:10:26.19:71,0,26	0/1:18,1:13:85.30:146,0,85	1/1:12,2:12:23.82:241,24,0	1/1:10,1:6:11.18:151,11,0	0/1:14,2:13:27.67:123,0,28	0/1:12,1:10:30.90:76,0,31	0/0:36,0:18:28.45:0,28,565	0/0:20,0:16:40.35:0,40,526	0/0:133,0:124:99:0,306,4197	0/0:26,0:22:1.25:0,1,3	1/1:12,0:7:1.25:3,1,0	0/0:16,0:13:1.74:0,2,6	0/0:22,0:19:48.16:0,48,669	0/1:37,0:21:33.40:69,0,33	1/1:7,0:6:11.55:89,12,0	1/1:1,0:1:3.01:38,3,0
chr10	13113203	.	T	TGC	188.87	PASS	AB=0.960;AC=14;AF=0.259;AN=54;BaseQRankSum=9.696;DP=825;FS=10.125;HRun=0;HaplotypeScore=174.0728;InbreedingCoeff=-0.0760;MQ=37.91;MQ0=138;MQRankSum=-7.810;QD=0.90;ReadPosRankSum=-2.991;VQSLOD=1.2847;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:34:7.55:0,8,1150	0/0:3,0:2:0.47:0,0,2	0/0:38,0:3:5.98:0,6,65	0/0:58,0:4:2.92:0,3,17	./.	0/0:22,0:19:51.16:0,51,751	0/0:43,0:38:93.16:0,93,1266	0/0:75,0:44:96.27:0,96,1336	0/1:18,0:17:24.98:25,0,79	0/0:44,0:27:4.37:0,4,131	0/0:17,0:12:6.02:0,6,91	0/1:29,0:20:31.40:36,0,31	0/1:19,0:9:10.04:10,0,40	0/1:22,0:15:21.11:21,0,108	1/1:14,0:13:5.56:19,6,0	0/1:13,0:8:20.95:23,0,21	0/1:13,2:12:22.97:23,0,81	0/1:9,2:9:74.49:107,0,74	0/0:43,0:21:54.14:0,54,752	0/0:21,0:17:45.10:0,45,620	0/0:134,0:126:99:0,261,4462	0/0:26,0:22:2.98:0,3,21	0/0:12,0:7:2.50:0,2,9	0/1:18,1:14:2.87:3,0,6	0/0:23,0:20:54.16:0,54,778	0/1:37,0:21:32.81:33,0,35	0/1:8,0:7:9.10:24,0,9	1/1:1,0:1:1.82:5,2,0
chr10	13113209	.	G	GCA	674.31	PASS	AB=0.891;AC=14;AF=0.259;AN=54;BaseQRankSum=7.218;DP=837;FS=4.954;HRun=0;HaplotypeScore=169.4208;InbreedingCoeff=-0.1022;MQ=38.48;MQ0=137;MQRankSum=-4.318;QD=2.83;ReadPosRankSum=-1.614;VQSLOD=1.9128;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:37:99:0,101,1588	1/1:7,0:5:2.88:20,3,0	0/0:40,0:5:9.03:0,9,134	0/0:48,0:2:6.02:0,6,97	./.	0/0:23,0:20:54.18:0,54,881	0/0:42,0:37:82.52:0,83,1285	0/0:72,0:43:96.30:0,96,1477	0/1:14,6:18:57.39:57,0,121	0/1:41,0:27:13.88:14,0,134	0/0:17,0:12:6.02:0,6,98	0/1:28,5:22:37.43:37,0,69	0/1:19,1:9:10.27:10,0,61	0/1:23,5:21:99:193,0,139	0/0:9,5:12:2.74:0,3,12	0/1:11,3:9:19.61:35,0,20	0/1:12,2:11:99:143,0,137	0/1:10,1:7:22.59:23,0,136	0/0:43,0:22:50.63:0,51,762	0/0:19,0:15:40.38:0,40,639	0/0:137,0:129:99:0,326,5107	0/0:26,0:22:1.25:0,1,3	0/0:12,0:7:2.60:0,3,10	0/0:21,1:17:6.61:0,7,35	0/0:24,0:21:57.19:0,57,910	0/1:37,0:21:17.45:135,0,17	0/1:10,2:11:33.69:118,0,34	1/1:0,1:1:3.01:36,3,0
chr10	13113215	.	GTGT	G	1495.51	PASS	AB=0.959;AC=23;AF=0.426;AN=54;BaseQRankSum=10.435;DP=843;FS=2.444;HRun=0;HaplotypeScore=170.5197;InbreedingCoeff=0.3254;MQ=39.39;MQ0=130;MQRankSum=-7.523;QD=5.12;ReadPosRankSum=-4.879;VQSLOD=0.9636;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:40:99:0,105,2129	1/1:8,0:5:3.01:45,3,0	0/0:39,0:3:9.03:0,9,180	0/0:43,0:3:6.02:0,6,136	./.	0/0:23,0:20:57.19:0,57,1201	0/0:40,0:35:82.07:0,82,1671	0/0:72,0:43:82.06:0,82,1560	0/1:18,2:18:99:108,0,177	0/1:38,0:27:52.17:52,0,188	0/0:18,0:12:6.02:0,6,129	0/1:32,2:23:4.26:119,0,4	0/1:20,0:9:35.85:67,0,36	0/1:25,2:22:99:235,0,106	1/1:15,0:13:9.60:85,10,0	1/1:15,0:10:6.12:50,6,0	0/1:12,1:9:73.67:136,0,74	0/1:11,0:7:42.70:43,0,78	0/0:42,0:22:30.32:0,30,855	0/0:20,0:16:43.39:0,43,899	0/0:142,0:133:99:0,268,6132	0/0:26,0:22:1.25:0,1,3	1/1:12,0:7:2.96:19,3,0	1/1:26,1:21:14.19:140,14,0	0/0:22,0:19:48.16:0,48,1041	1/1:37,0:21:17.53:245,18,0	1/1:14,0:13:23.36:284,23,0	1/1:1,0:1:3.01:47,3,0
chr10	13113290	.	C	CGT	11323.48	PASS	AB=0.737;AC=31;AF=0.554;AN=56;BaseQRankSum=-6.906;DP=884;FS=5.938;HRun=0;HaplotypeScore=129.7634;InbreedingCoeff=-0.0582;MQ=49.00;MQ0=26;MQRankSum=2.144;QD=15.86;ReadPosRankSum=2.368;VQSLOD=4.8541;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:54:99:0,117,1307	1/1:11,4:12:24.06:321,24,0	0/0:33,0:2:3.01:0,3,36	0/1:58,0:7:0:0,0,0	1/1:13,5:15:42.11:608,42,0	0/0:21,0:21:44:0,44,464	0/0:38,0:36:43.17:0,43,567	0/1:39,11:41:15.77:622,0,16	0/1:13,19:30:40.53:397,0,41	1/1:22,10:30:12.84:759,13,0	1/1:7,5:12:21.03:266,21,0	1/1:24,9:28:6.64:555,7,0	0/1:13,7:18:3.30:487,0,3	1/1:27,6:32:42.14:644,42,0	0/1:6,19:26:4.95:549,0,5	0/1:15,5:18:79.95:303,0,80	0/1:14,12:23:33.38:548,0,33	0/1:13,15:25:69.70:467,0,70	0/1:14,7:16:64.42:212,0,64	0/1:12,6:18:19.87:363,0,20	0/1:67,80:147:99:1752,0,276	0/1:23,9:32:64.41:697,0,64	0/1:9,4:13:45:263,0,45	0/1:20,15:32:11.20:715,0,11	0/0:20,0:21:39.07:0,39,517	0/1:16,6:21:34.73:460,0,35	1/1:9,4:13:18.06:285,18,0	1/1:0,2:3:3.01:48,3,0
chr10	13113506	.	C	CT	5336.07	PASS	AB=0.792;AC=36;AF=0.643;AN=56;BaseQRankSum=-5.736;DP=556;FS=6.180;HRun=12;HaplotypeScore=60.2577;InbreedingCoeff=0.7188;MQ=69.99;MQ0=2;MQRankSum=-0.852;QD=14.78;ReadPosRankSum=1.658;VQSLOD=5.6831;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:44,2:50:32.36:0,32,596	1/1:0,6:6:6.01:58,6,0	0/0:13,0:9:5.45:0,5,79	0/1:17,0:11:2.04:2,0,31	1/1:6,17:23:0.99:294,1,0	0/0:16,0:18:25.46:0,25,271	0/0:27,0:27:64.77:0,65,450	0/0:29,0:29:34.64:0,35,388	1/1:4,14:19:5.13:211,5,0	1/1:8,17:27:12.67:389,13,0	1/1:8,14:22:20.90:270,21,0	1/1:6,12:18:20.15:228,20,0	1/1:9,9:19:19.92:330,20,0	1/1:3,12:15:27.04:263,27,0	1/1:5,15:20:19.99:343,20,0	1/1:3,11:15:32.89:306,33,0	1/1:7,22:29:43.85:577,44,0	1/1:5,28:35:65.77:608,66,0	0/0:11,0:12:3.94:0,4,150	0/0:12,1:13:6.61:0,7,211	0/0:15,0:15:35.39:0,35,251	0/1:6,14:21:13.64:203,0,14	1/1:11,7:19:8.40:217,8,0	1/1:4,17:21:36:339,36,0	0/0:17,0:17:38.72:0,39,282	1/1:3,13:16:36.02:337,36,0	1/1:0,16:17:35.89:331,36,0	1/1:0,1:1:3:29,3,0
chr10	13115231	.	G	GTT	729.51	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=3.350;DP=565;FS=0.000;HRun=11;HaplotypeScore=75.9822;InbreedingCoeff=0.8234;MQ=68.04;MQ0=3;MQRankSum=2.305;QD=20.26;ReadPosRankSum=-0.833;VQSLOD=2.7303;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:23:53.78:0,54,506	0/0:17,0:17:23.53:0,24,385	0/0:26,1:18:17.50:0,18,138	0/0:23,0:10:1.78:0,2,52	0/0:31,0:34:68.23:0,68,613	1/1:6,16:25:22.05:636,22,0	1/1:4,5:11:17.54:211,18,0	0/0:31,0:33:44.42:0,44,663	0/0:11,0:12:29.67:0,30,261	0/0:17,0:19:29.94:0,30,340	0/0:27,0:28:65.79:0,66,689	0/0:17,0:18:44.76:0,45,419	0/0:8,0:10:11.67:0,12,149	0/0:10,0:10:30.03:0,30,285	0/0:20,0:22:43.57:0,44,486	0/0:11,0:11:24.01:0,24,233	0/0:37,0:40:86.92:0,87,930	0/0:16,0:16:42.06:0,42,407	0/0:27,0:31:40.24:0,40,481	0/0:18,0:21:17.75:0,18,314	0/0:12,0:12:30.03:0,30,291	0/0:16,0:16:16.66:0,17,347	0/0:22,0:23:44.92:0,45,483	0/0:11,0:12:20.83:0,21,253	0/0:22,0:24:40.30:0,40,433	0/0:18,0:21:48.06:0,48,435	0/0:19,0:20:53.81:0,54,507	0/0:4,0:4:6.01:0,6,58
chr10	13115536	.	G	GGTGAGGGCC	55205.49	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-6.560;DP=677;FS=6.255;HRun=0;HaplotypeScore=173.7282;InbreedingCoeff=0.9787;MQ=76.84;MQ0=0;MQRankSum=-15.581;QD=99.11;ReadPosRankSum=3.707;VQSLOD=4.8250;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:87.24:0,87,2363	1/1:5,5:13:27.09:1130,27,0	0/0:24,0:24:69.23:0,69,1884	0/0:39,0:39:99:0,108,2701	1/1:10,19:30:48.16:2308,48,0	1/1:9,12:21:51.17:2025,51,0	1/1:20,26:53:99:5132,123,0	1/1:12,9:24:57.19:2335,57,0	1/1:11,11:22:54.18:2290,54,0	1/1:13,15:28:75.26:3318,75,0	1/1:6,15:25:45.15:2080,45,0	1/1:8,15:23:66.23:3075,66,0	1/1:6,13:22:63.22:2654,63,0	1/1:4,16:23:57.20:2541,57,0	1/1:6,16:23:57.20:2595,57,0	1/1:4,11:16:42.14:1891,42,0	1/1:7,21:33:75.26:3498,75,0	1/1:6,8:16:24.08:1092,24,0	1/1:13,5:23:63.16:2382,63,0	1/1:4,3:8:15.05:631,15,0	1/1:10,10:24:42.14:1796,42,0	1/1:5,13:24:53.73:2371,54,0	1/1:8,10:18:42.14:1841,42,0	1/1:5,16:24:30.57:1413,31,0	0/0:22,0:22:66.22:0,66,1904	1/1:11,17:31:84.23:3646,84,0	1/1:8,13:25:62.81:2777,63,0	1/1:3,1:6:9.03:385,9,0
chr10	13116056	.	AAC	A	1445.66	PASS	AB=0.625;AC=37;AF=0.804;AN=46;BaseQRankSum=3.685;DP=195;FS=7.114;HRun=0;HaplotypeScore=30.8978;InbreedingCoeff=0.4813;MQ=63.60;MQ0=8;MQRankSum=-1.117;QD=14.31;ReadPosRankSum=1.989;VQSLOD=2.1048;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:21.07:0,21,328	1/1:1,2:3:5.98:55,6,0	0/0:29,0:21:15.05:0,15,230	0/0:31,0:23:17.86:0,18,233	1/1:7,1:8:2.51:31,3,0	1/1:12,3:15:9.03:105,9,0	1/1:4,9:13:28.64:319,29,0	./.	1/1:0,5:5:12.04:140,12,0	1/1:4,3:6:12.03:140,12,0	1/1:1,1:2:3.01:35,3,0	1/1:4,0:4:3.01:35,3,0	1/1:0,1:1:3.01:35,3,0	./.	1/1:1,1:2:3.01:35,3,0	1/1:3,2:6:9.03:105,9,0	1/1:3,3:6:9.03:105,9,0	1/1:2,1:3:6:58,6,0	./.	./.	0/1:2,3:5:28.87:29,0,29	1/1:3,4:7:15.04:173,15,0	./.	1/1:2,4:6:5.59:69,6,0	0/0:7,0:5:15.05:0,15,228	1/1:0,1:1:3.01:35,3,0	1/1:1,2:3:6.02:70,6,0	1/1:4,0:4:2.97:20,3,0
chr10	13116473	.	AT	A	12222.25	PASS	AB=0.944;AC=45;AF=0.804;AN=56;BaseQRankSum=9.409;DP=728;FS=0.000;HRun=10;HaplotypeScore=75.5780;InbreedingCoeff=0.8865;MQ=66.09;MQ0=0;MQRankSum=-1.583;QD=21.00;ReadPosRankSum=5.703;VQSLOD=5.1203;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,2:47:99:0,100,1302	1/1:0,5:5:15:130,15,0	0/0:20,0:20:33.07:0,33,342	0/1:15,0:15:15.03:15,0,139	1/1:0,35:35:98.97:859,99,0	0/0:15,0:15:33.06:0,33,348	0/0:42,2:45:58.22:0,58,1119	1/1:6,18:24:29.94:422,30,0	1/1:4,29:33:53.79:696,54,0	1/1:4,29:33:86.97:755,87,0	1/1:1,10:11:29.99:260,30,0	1/1:2,22:24:62.96:547,63,0	1/1:4,18:22:44.98:391,45,0	1/1:2,18:20:53.99:469,54,0	1/1:5,27:32:77.98:677,78,0	1/1:3,29:32:47.80:644,48,0	1/1:5,22:27:35.79:540,36,0	1/1:3,21:24:50.97:443,51,0	1/1:6,16:22:47.96:412,48,0	1/1:2,21:22:56.97:495,57,0	1/1:4,43:47:99:1094,126,0	1/1:3,22:25:62.97:547,63,0	1/1:3,16:19:47.99:417,48,0	1/1:1,28:29:77.98:677,78,0	0/0:19,0:19:57.15:0,57,626	1/1:6,29:35:86.92:742,87,0	1/1:4,31:35:89.97:781,90,0	1/1:0,8:8:24:208,24,0
chr10	13117637	.	ATGTGTG	A	4780.09	PASS	AB=0.775;AC=39;AF=0.750;AN=52;BaseQRankSum=7.629;DP=504;FS=43.471;HRun=0;HaplotypeScore=121.6992;InbreedingCoeff=0.5670;MQ=70.05;MQ0=7;MQRankSum=-8.272;QD=14.18;ReadPosRankSum=2.138;VQSLOD=2.5001;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:51.17:0,51,1272	1/1:3,3:6:6.02:116,6,0	./.	0/0:25,0:21:3.01:0,3,45	1/1:12,4:19:5.96:72,6,0	0/0:17,0:18:24.08:0,24,552	0/0:25,0:29:44.20:0,44,1263	./.	1/1:4,8:13:24.08:449,24,0	0/1:12,5:16:12.25:253,0,12	1/1:18,6:24:12.03:225,12,0	1/1:7,8:16:15.02:259,15,0	1/1:7,0:11:12.01:147,12,0	1/1:4,6:13:18.03:289,18,0	1/1:10,5:16:15.05:286,15,0	1/1:12,9:21:27.09:534,27,0	1/1:11,6:16:9.03:175,9,0	0/1:12,9:22:82.66:377,0,83	1/1:8,0:11:1.90:58,2,0	1/1:8,0:21:29.45:253,29,0	0/1:14,0:16:0:0,0,0	1/1:5,4:9:9.92:169,10,0	1/1:10,4:14:3.01:61,3,0	1/1:10,11:21:5.99:123,6,0	0/0:13,0:13:12.04:0,12,331	1/1:14,7:21:21.91:354,22,0	1/1:10,8:19:17.28:341,17,0	1/1:2,5:7:12.04:238,12,0
chr10	13117845	.	GA	G	1356.77	PASS	AB=1.000;AC=28;AF=0.500;AN=56;BaseQRankSum=17.430;DP=589;FS=9.981;HRun=1;HaplotypeScore=86.3339;InbreedingCoeff=0.4372;MQ=69.87;MQ0=2;MQRankSum=-1.866;QD=3.80;ReadPosRankSum=7.846;VQSLOD=-0.5809;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:84.29:0,84,1333	0/1:7,0:7:7.91:32,0,8	0/0:31,0:25:62.34:0,62,926	0/0:20,0:16:45.13:0,45,658	0/1:17,0:17:11.01:60,0,11	0/0:24,0:24:72.25:0,72,1143	0/0:22,0:22:66.21:0,66,1027	0/0:27,0:27:81.26:0,81,1239	1/1:24,0:24:26.97:137,27,0	0/1:23,0:23:13.44:55,0,13	1/1:12,1:13:1.84:100,2,0	1/1:31,0:31:20.02:124,20,0	0/1:17,0:17:37.01:71,0,37	0/1:25,0:25:10.86:87,0,11	1/1:20,2:22:14.89:111,15,0	0/1:19,0:19:26.47:77,0,26	0/1:32,0:32:0.44:124,0,0	1/1:18,0:18:26.73:80,27,0	0/0:14,0:14:36.11:0,36,550	0/0:11,0:11:33.07:0,33,455	0/0:37,0:37:99:0,108,1664	1/1:12,0:12:23.42:69,23,0	1/1:19,0:19:7.12:82,7,0	1/1:21,0:21:19.10:91,19,0	0/0:18,0:18:54.08:0,54,733	1/1:22,1:23:9.39:92,9,0	1/1:24,0:24:31.48:151,31,0	0/1:10,0:10:14.19:14,0,50
chr10	13117846	.	AC	A	9139.10	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=11.340;DP=586;FS=13.439;HRun=7;HaplotypeScore=60.7551;InbreedingCoeff=0.9971;MQ=69.97;MQ0=2;MQRankSum=-2.791;QD=25.74;ReadPosRankSum=5.036;VQSLOD=4.2702;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:84.27:0,84,1054	1/1:1,6:7:18.04:184,18,0	0/0:30,0:24:60.18:0,60,727	0/0:20,0:16:39.11:0,39,472	1/1:1,15:16:42.09:428,42,0	0/0:24,0:24:72.23:0,72,906	0/0:22,0:22:63.19:0,63,780	0/0:26,0:26:75.23:0,75,932	1/1:1,23:24:66.15:673,66,0	1/1:2,21:23:63.14:643,63,0	1/1:2,11:13:30.06:301,30,0	1/1:2,29:31:78.16:796,78,0	1/1:2,14:16:39.08:398,39,0	1/1:1,24:25:60.13:612,60,0	1/1:2,19:21:54.08:540,54,0	1/1:2,16:18:45.10:459,45,0	1/1:4,29:33:84.19:857,84,0	1/1:1,17:18:42.06:417,42,0	0/0:14,0:14:39.11:0,39,469	0/0:11,0:11:24.08:0,24,302	0/0:38,0:38:99:0,105,1308	1/1:0,12:12:33.08:337,33,0	1/1:2,18:20:42.08:422,42,0	1/1:1,20:21:57.13:582,57,0	0/0:18,0:18:42.07:0,42,489	1/1:3,21:24:63.11:634,63,0	1/1:0,23:23:66.15:673,66,0	1/1:3,7:10:18.04:184,18,0
chr10	13118315	.	CTTTCTTTTT	C	1675.84	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=2.896;DP=511;FS=4.168;HRun=0;HaplotypeScore=142.2190;InbreedingCoeff=0.8760;MQ=51.53;MQ0=17;MQRankSum=-6.874;QD=37.24;ReadPosRankSum=3.983;VQSLOD=3.4331;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:40:93.23:0,93,2460	0/0:4,0:3:6.02:0,6,176	0/0:12,0:8:15.01:0,15,208	0/0:8,0:4:9.01:0,9,165	0/0:24,0:24:69:0,69,1715	1/1:5,19:23:33.11:979,33,0	1/1:2,18:21:32.93:818,33,0	0/0:23,0:23:57.92:0,58,1310	0/0:20,0:19:53.45:0,53,1140	0/0:21,0:21:57.37:0,57,956	0/0:14,0:14:33.71:0,34,789	0/0:14,0:13:35.56:0,36,615	0/0:15,0:15:33.06:0,33,778	0/0:22,0:22:59.96:0,60,1326	0/0:11,0:10:19.70:0,20,421	0/0:9,0:9:23.42:0,23,391	0/0:28,0:26:53.98:0,54,1440	0/0:16,0:14:35.93:0,36,741	0/0:20,0:18:48:0,48,1300	0/0:10,0:11:27.05:0,27,630	0/0:18,0:18:39:0,39,1164	0/0:26,0:22:62.51:0,63,1476	0/0:16,0:14:32.83:0,33,519	0/0:25,0:25:60.21:0,60,1647	0/0:21,0:21:54.84:0,55,1398	0/0:21,0:21:56.48:0,56,1129	0/0:18,0:17:8.01:0,8,797	0/0:8,0:8:18.06:0,18,475
chr10	13118317	.	TTC	T	687.91	PASS	AB=0.983;AC=13;AF=0.232;AN=56;BaseQRankSum=8.792;DP=501;FS=19.064;HRun=0;HaplotypeScore=82.5851;InbreedingCoeff=0.0660;MQ=50.66;MQ0=17;MQRankSum=-5.501;QD=3.60;ReadPosRankSum=3.255;VQSLOD=0.3348;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:39:58.39:0,58,471	0/0:4,0:3:2.82:0,3,18	0/0:10,0:6:0.97:0,1,48	0/0:7,0:3:8.98:0,9,74	0/0:24,0:24:16.35:0,16,187	1/1:22,0:21:33.08:342,33,0	1/1:20,0:20:31.58:303,32,0	0/0:22,0:22:36.18:0,36,339	0/0:21,0:20:17.42:0,17,226	0/0:21,0:21:26.18:0,26,220	0/0:15,0:15:15.13:0,15,158	0/1:15,0:14:60.52:61,0,82	0/1:14,0:14:18.64:19,0,159	0/1:19,3:22:34.12:34,0,229	0/1:11,0:10:13.28:13,0,20	0/1:9,0:9:12.57:13,0,51	0/0:27,0:25:27.44:0,27,237	0/0:16,0:14:15.43:0,15,139	0/0:19,0:17:23.73:0,24,308	0/0:11,0:11:23.07:0,23,170	0/0:15,0:15:31.60:0,32,202	0/1:25,1:22:29.75:30,0,146	0/0:16,0:14:7.48:0,7,83	0/1:25,0:25:14.78:15,0,118	0/0:21,0:21:45.70:0,46,394	0/0:21,0:21:11.02:0,11,175	0/1:18,0:17:2.07:2,0,105	0/1:9,0:9:15.65:16,0,56
chr10	13118319	.	CTT	C	2374.32	PASS	AB=0.734;AC=40;AF=0.714;AN=56;BaseQRankSum=-0.121;DP=508;FS=0.523;HRun=16;HaplotypeScore=77.1249;InbreedingCoeff=0.3231;MQ=49.36;MQ0=19;MQRankSum=0.672;QD=5.36;ReadPosRankSum=4.628;VQSLOD=-0.5418;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:24,3:45:17.48:17,0,187	1/1:2,2:3:2.97:25,3,0	0/0:8,0:5:0:0,0,0	0/0:7,0:3:0:0,0,0	1/1:7,16:26:11.18:225,11,0	1/1:20,0:19:30.78:142,31,0	1/1:20,1:21:12.17:119,12,0	0/0:14,1:22:13.57:0,14,218	0/1:15,6:20:28.53:112,0,29	1/1:7,9:20:22.70:160,23,0	0/1:10,4:15:16.97:40,0,17	0/1:10,5:15:2.73:73,0,3	1/1:8,6:14:8.80:75,9,0	1/1:20,2:22:14.19:111,14,0	1/1:2,8:10:16.09:134,16,0	1/1:4,5:9:14.51:110,15,0	1/1:14,10:26:5.62:133,6,0	1/1:10,5:14:9.83:106,10,0	0/1:12,2:17:17.34:17,0,160	0/0:6,0:11:16.77:0,17,89	0/0:10,0:16:21.55:0,22,97	1/1:12,11:22:20.55:216,21,0	1/1:5,7:14:5.18:65,5,0	1/1:7,15:25:33.41:303,33,0	0/1:13,1:20:4.04:4,0,100	1/1:10,9:20:26.31:206,26,0	1/1:9,9:17:9.03:81,9,0	1/1:4,4:9:7.26:60,7,0
chr10	13119515	.	G	GT	892.94	PASS	AB=0.946;AC=21;AF=0.375;AN=56;BaseQRankSum=-6.292;DP=602;FS=0.544;HRun=14;HaplotypeScore=115.5668;InbreedingCoeff=0.2115;MQ=71.31;MQ0=5;MQRankSum=3.164;QD=2.90;ReadPosRankSum=-3.813;VQSLOD=-0.1861;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,2:37:12.86:0,13,321	0/0:10,0:10:0.04:0,0,4	0/0:25,0:17:5.12:0,5,64	0/0:27,0:13:11.69:0,12,61	1/1:24,0:24:4.83:69,5,0	0/0:2,0:24:30.68:0,31,89	0/0:5,0:18:13.99:0,14,56	0/1:16,8:24:7.99:142,0,8	0/0:21,0:21:13:0,13,37	0/1:28,0:28:8.51:29,0,9	0/1:17,1:18:12.26:29,0,12	0/1:21,0:21:2.83:10,0,3	0/1:15,0:14:12.36:16,0,12	0/0:26,0:26:4.88:0,5,11	0/1:18,0:18:23.02:38,0,23	1/1:18,1:19:3.89:32,4,0	0/1:19,1:20:18.66:37,0,19	1/1:20,1:21:2.63:76,3,0	0/1:16,3:18:27.88:127,0,28	1/1:3,10:14:4.66:151,5,0	1/1:10,9:18:18:158,18,0	0/1:25,0:25:0.15:43,0,0	0/0:24,0:24:8.20:0,8,21	0/0:20,0:21:1.49:0,1,3	0/0:18,0:23:41.41:0,41,234	1/1:23,0:23:8.54:100,9,0	0/0:24,0:24:10.69:0,11,26	0/0:13,0:13:7.64:0,8,18
chr10	13119528	.	TTG	T	7844.98	PASS	AB=1.000;AC=41;AF=0.732;AN=56;BaseQRankSum=4.203;DP=595;FS=1.800;HRun=0;HaplotypeScore=98.8090;InbreedingCoeff=0.6254;MQ=66.39;MQ0=7;MQRankSum=-0.764;QD=17.20;ReadPosRankSum=5.085;VQSLOD=5.0532;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:37:94.37:0,94,1144	1/1:4,7:11:26.74:262,27,0	0/0:24,0:17:22.52:0,23,205	0/0:21,0:8:13.28:0,13,61	1/1:6,21:27:65.15:581,65,0	0/1:27,0:27:25.78:26,0,59	1/1:17,0:17:7.48:45,7,0	0/1:27,0:26:33.09:33,0,411	1/1:6,12:18:30:333,30,0	1/1:6,17:23:59.72:614,60,0	1/1:13,4:17:33.58:342,34,0	1/1:1,18:19:26.87:319,27,0	1/1:5,10:14:1.28:160,1,0	1/1:11,14:25:34.49:352,34,0	1/1:16,5:21:58.97:582,59,0	1/1:16,3:19:53.77:556,54,0	1/1:12,6:18:34.60:532,35,0	1/1:14,10:24:68.73:698,69,0	0/0:18,0:16:33.77:0,34,379	0/1:15,0:15:9.33:9,0,263	0/0:15,0:13:0.84:0,1,188	1/1:9,18:27:48.88:438,49,0	1/1:5,18:23:41.87:476,42,0	1/1:4,13:17:6.02:77,6,0	0/0:22,0:22:43.88:0,44,590	1/1:3,22:25:53.89:519,54,0	1/1:5,19:24:29.88:350,30,0	1/1:7,10:17:47.98:542,48,0
chr10	13119529	.	TG	T	5625.26	PASS	AB=0.880;AC=36;AF=0.643;AN=56;BaseQRankSum=2.678;DP=579;FS=3.267;HRun=1;HaplotypeScore=96.3590;InbreedingCoeff=0.8502;MQ=65.96;MQ0=7;MQRankSum=-2.049;QD=14.54;ReadPosRankSum=3.325;VQSLOD=4.8066;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:37:77.99:0,78,896	1/1:8,3:11:26.79:242,27,0	0/0:22,0:16:25:0,25,220	0/0:19,0:8:5.87:0,6,61	1/1:23,4:27:64.95:441,65,0	0/0:27,0:27:54.17:0,54,303	0/0:16,0:16:44.52:0,45,221	0/1:23,2:24:0.45:0,0,299	1/1:15,3:18:29.35:190,29,0	1/1:19,4:23:58.94:443,59,0	1/1:16,1:17:36.67:284,37,0	1/1:18,1:19:26.75:200,27,0	0/1:12,3:14:4.01:137,0,4	1/1:14,10:24:35.81:312,36,0	1/1:14,6:20:56.76:411,57,0	1/1:11,9:20:56.70:478,57,0	1/1:16,2:18:27.60:344,28,0	1/1:21,3:24:67.84:516,68,0	0/0:18,0:16:24.32:0,24,284	0/0:14,0:14:7.68:0,8,210	0/0:16,0:14:20.83:0,21,171	1/1:21,4:25:47.95:317,48,0	1/1:19,1:20:41.30:297,41,0	1/1:16,0:16:5.93:41,6,0	0/0:20,1:21:9.39:0,9,371	1/1:23,1:24:53.01:400,53,0	1/1:21,3:24:29.86:197,30,0	1/1:15,2:17:49.21:373,49,0
chr10	13120635	.	AGAGAGAGAGAG	A	3221.60	PASS	AB=0.983;AC=30;AF=0.556;AN=54;BaseQRankSum=5.355;DP=465;FS=72.969;HRun=0;HaplotypeScore=166.2056;InbreedingCoeff=0.4307;MQ=43.59;MQ0=26;MQRankSum=-0.679;QD=11.67;ReadPosRankSum=-1.307;VQSLOD=-0.5407;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:36:93.31:0,93,2944	1/1:9,1:10:21.05:264,21,0	0/0:13,0:1:2.97:0,3,20	0/0:22,0:3:5.49:0,5,32	1/1:10,1:9:1.11:23,1,0	0/0:12,0:12:23.88:0,24,466	0/0:21,0:20:51.04:0,51,955	0/0:22,0:22:41.30:0,41,369	1/1:14,0:13:15.64:152,16,0	1/1:21,0:20:17.17:366,17,0	1/1:9,0:6:9.84:44,10,0	1/1:18,0:17:2.85:233,3,0	0/1:14,1:15:44.05:283,0,44	1/1:19,4:23:1.69:473,2,0	1/1:11,1:11:19.95:208,20,0	0/1:10,0:10:6.99:81,0,7	0/1:25,1:24:82.26:164,0,82	0/1:10,0:7:67.58:90,0,68	0/0:15,0:13:33.42:0,33,203	0/0:6,0:5:8.96:0,9,80	./.	1/1:12,0:12:21.27:158,21,0	1/1:10,2:12:24.47:221,24,0	1/1:22,0:19:18.66:116,19,0	0/0:17,0:16:25.46:0,25,384	1/1:22,0:22:21.96:492,22,0	0/1:16,0:15:21.62:38,0,22	0/1:13,0:9:5.11:5,0,30
chr10	13120646	.	G	GA	3046.19	PASS	AB=0.797;AC=18;AF=0.333;AN=54;BaseQRankSum=4.556;DP=454;FS=48.982;HRun=1;HaplotypeScore=97.5102;InbreedingCoeff=-0.5092;MQ=42.62;MQ0=32;MQRankSum=-5.470;QD=10.92;ReadPosRankSum=5.140;VQSLOD=-0.7350;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:36:86.64:0,87,1091	0/1:9,4:11:99:193,0,127	./.	0/0:12,0:4:9.03:0,9,114	0/1:7,4:9:89.21:89,0,97	0/0:18,0:18:35.35:0,35,413	0/0:20,0:19:47.36:0,47,438	0/0:21,0:20:58.45:0,58,617	0/1:6,9:14:99:240,0,155	0/1:12,8:20:99:355,0,214	0/1:8,0:6:2.78:3,0,103	0/1:8,7:14:99:229,0,192	0/1:9,5:14:53.50:217,0,53	0/1:15,6:21:99:255,0,106	0/1:9,3:11:99:134,0,164	0/1:12,0:12:88.43:161,0,88	0/1:18,10:24:99:283,0,229	0/1:6,7:9:99:108,0,131	0/0:11,0:9:25.32:0,25,292	0/0:4,0:3:3.01:0,3,34	0/0:26,0:19:8.66:0,9,98	0/1:11,2:13:92.35:92,0,131	0/1:8,2:10:41.12:172,0,41	0/1:16,10:22:99:159,0,127	0/0:21,0:20:41.47:0,41,411	0/1:12,7:20:99:415,0,246	0/1:10,1:11:68.09:68,0,236	0/1:12,0:7:25.16:25,0,112
chr10	13120855	.	T	TG	8061.06	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=0.546;DP=416;FS=16.736;HRun=0;HaplotypeScore=61.6063;InbreedingCoeff=0.9778;MQ=71.29;MQ0=1;MQRankSum=-3.661;QD=35.83;ReadPosRankSum=3.659;VQSLOD=3.2297;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:92.45:0,92,1190	1/1:2,7:9:27.07:347,27,0	0/0:24,0:15:27.90:0,28,443	0/0:26,0:15:28.57:0,29,290	1/1:2,22:24:72.12:918,72,0	0/0:17,0:17:39.12:0,39,526	0/0:9,0:9:24.08:0,24,333	0/0:20,0:20:53.06:0,53,639	1/1:0,6:6:12.04:162,12,0	1/1:1,20:20:59.96:774,60,0	1/1:0,12:12:36.12:487,36,0	1/1:0,9:8:21.07:271,21,0	1/1:1,7:8:15.05:205,15,0	1/1:0,7:7:15.05:205,15,0	1/1:1,4:5:15.04:194,15,0	1/1:0,9:9:21.07:282,21,0	1/1:0,23:21:57.10:776,57,0	1/1:2,18:19:57.11:765,57,0	0/0:22,0:22:55.21:0,55,799	0/0:16,0:16:48.11:0,48,599	0/0:7,0:7:21.07:0,21,290	1/1:0,6:6:15.05:205,15,0	1/1:0,6:6:18.06:248,18,0	1/1:2,3:5:12.04:163,12,0	0/0:17,0:17:48.15:0,48,651	1/1:1,19:20:57.17:760,57,0	1/1:0,17:17:48.16:655,48,0	1/1:3,15:18:48.13:644,48,0
chr10	13120883	.	A	AT	2872.90	PASS	AB=1.000;AC=39;AF=0.696;AN=56;BaseQRankSum=9.618;DP=431;FS=5.164;HRun=4;HaplotypeScore=70.0820;InbreedingCoeff=0.6458;MQ=61.81;MQ0=22;MQRankSum=-4.389;QD=10.88;ReadPosRankSum=2.068;VQSLOD=0.9816;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:69.55:0,70,812	1/1:1,7:8:21.03:205,21,0	0/0:53,1:12:21.62:0,22,179	0/1:55,0:16:9.96:10,0,103	1/1:16,6:22:31.04:341,31,0	0/1:14,0:14:14.44:43,0,14	0/1:8,0:7:4.27:18,0,4	0/0:28,0:28:73.71:0,74,784	1/1:6,2:6:12.02:119,12,0	1/1:11,4:14:21.69:189,22,0	1/1:6,3:8:20.26:175,20,0	1/1:2,1:2:3:27,3,0	1/1:4,2:5:9.01:86,9,0	1/1:3,0:3:1.73:24,2,0	1/1:0,4:4:12.03:132,12,0	1/1:6,1:7:10.89:94,11,0	1/1:16,8:21:29.01:285,29,0	1/1:14,10:22:42.78:396,43,0	0/0:20,0:20:48.11:0,48,531	0/0:13,0:13:33.08:0,33,365	0/0:4,0:4:12.02:0,12,126	1/1:2,1:2:3:28,3,0	1/1:2,1:3:6.89:59,7,0	1/1:2,4:5:7.56:62,8,0	0/0:15,0:14:39.10:0,39,435	1/1:6,6:11:23.88:186,24,0	1/1:6,7:13:32.93:317,33,0	1/1:7,9:16:27.94:271,28,0
chr10	13120886	.	T	TA	407.63	PASS	AB=1.000;AC=20;AF=0.357;AN=56;BaseQRankSum=6.964;DP=433;FS=4.461;HRun=0;HaplotypeScore=75.9758;InbreedingCoeff=0.0054;MQ=59.70;MQ0=30;MQRankSum=-4.455;QD=2.17;ReadPosRankSum=5.484;VQSLOD=1.7146;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:78.25:0,78,1073	0/1:9,0:9:22.78:23,0,27	0/0:59,0:11:21.73:0,22,230	0/0:54,1:16:12.44:0,12,201	0/1:21,0:21:7.69:8,0,162	1/1:2,12:13:16.26:247,16,0	1/1:4,5:7:14.62:142,15,0	0/0:29,0:29:81.23:0,81,1083	0/1:8,0:6:10.30:10,0,38	0/0:14,0:13:7.10:0,7,94	0/1:10,0:9:10.53:11,0,32	0/1:3,0:2:1.66:2,0,22	0/1:5,0:4:4.24:4,0,22	0/0:2,0:2:3.45:0,3,24	1/1:5,0:4:9.37:37,9,0	0/0:6,0:6:1.74:0,2,44	0/1:26,0:22:9.41:9,0,164	0/1:25,0:22:5.69:6,0,155	0/0:18,0:18:51.16:0,51,698	0/0:11,0:11:33.11:0,33,461	0/0:4,0:4:12.04:0,12,167	0/1:3,0:2:2.26:2,0,19	0/1:4,0:3:5.89:6,0,14	0/1:6,0:5:3.65:4,0,16	0/0:17,0:16:39.13:0,39,545	0/1:12,0:11:0.92:1,0,85	0/1:12,0:12:7.54:38,0,8	0/1:16,0:16:15.63:16,0,69
chr10	13123162	.	TACACACAC	T	2342.78	PASS	AB=0.706;AC=31;AF=0.816;AN=38;BaseQRankSum=0.920;DP=414;FS=0.000;HRun=0;HaplotypeScore=138.4069;InbreedingCoeff=0.3695;MQ=67.01;MQ0=13;MQRankSum=0.465;QD=11.05;ReadPosRankSum=0.093;VQSLOD=2.5654;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:18.06:0,18,409	./.	./.	./.	1/1:6,3:9:0.47:1,0,0	1/1:11,0:18:6.02:127,6,0	1/1:17,0:22:2.37:63,2,0	1/1:11,0:11:5.98:49,6,0	./.	0/1:7,0:12:77.81:257,0,78	./.	1/1:8,2:10:3.01:68,3,0	1/1:5,2:7:3.40:18,3,0	1/1:13,0:12:11.25:292,11,0	./.	1/1:9,5:14:6.02:138,6,0	./.	1/1:18,0:18:21.07:484,21,0	1/1:16,0:16:11.47:186,11,0	1/1:12,3:14:6.02:143,6,0	./.	./.	1/1:5,0:4:6.02:124,6,0	0/0:20,5:24:0.47:0,0,1	0/0:17,0:17:12.04:0,12,313	1/1:11,5:15:15.05:362,15,0	1/1:8,4:13:3.07:82,3,0	1/1:4,0:8:3.01:65,3,0
chr10	13123249	.	AGC	A	3983.11	PASS	AB=1.000;AC=37;AF=0.661;AN=56;BaseQRankSum=3.098;DP=549;FS=0.440;HRun=0;HaplotypeScore=87.1694;InbreedingCoeff=0.9273;MQ=69.18;MQ0=20;MQRankSum=0.211;QD=12.14;ReadPosRankSum=1.482;VQSLOD=3.3338;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:24:41.09:0,41,401	1/1:10,0:9:9.94:94,10,0	0/0:28,0:16:18.74:0,19,236	0/0:40,0:20:30.68:0,31,291	1/1:14,0:14:33.90:280,34,0	0/0:21,0:20:29.89:0,30,284	0/0:22,0:20:22.97:0,23,186	0/0:22,0:22:34.86:0,35,276	1/1:11,0:11:19.76:172,20,0	1/1:14,10:24:40.28:358,40,0	1/1:10,0:10:17.92:161,18,0	1/1:18,0:18:25.27:190,25,0	1/1:15,0:14:27.28:192,27,0	1/1:8,0:8:6.88:45,7,0	1/1:19,0:19:32.34:261,32,0	1/1:12,0:12:18.46:155,18,0	1/1:23,0:21:36.35:293,36,0	1/1:22,0:20:35.35:282,35,0	0/0:17,0:15:26.39:0,26,274	0/0:20,0:20:40.64:0,41,299	0/0:24,0:23:38.58:0,39,273	1/1:16,0:16:17:176,17,0	1/1:25,0:24:41.36:332,41,0	1/1:21,0:21:15.36:156,15,0	0/1:16,0:16:0.87:1,0,149	1/1:20,0:19:37.87:275,38,0	1/1:26,0:26:36.05:294,36,0	1/1:18,0:17:34.15:266,34,0
chr10	13126263	.	C	CGATATTACCGGCAGGCGTGAAGCCC	1540.23	PASS	AB=0.700;AC=21;AF=0.955;AN=22;BaseQRankSum=-1.576;DP=43;FS=7.404;HRun=0;HaplotypeScore=38.9094;InbreedingCoeff=-0.2049;MQ=144.60;MQ0=0;MQRankSum=-0.315;QD=48.13;ReadPosRankSum=-0.788;VQSLOD=0.0428;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:5,0:5:3.01:47,3,0	./.	1/1:4,1:6:15.03:696,15,0	0/1:4,0:7:18.30:446,0,18	1/1:2,0:2:5.99:50,6,0	./.	./.	./.	./.	1/1:2,0:2:3:28,3,0	./.	./.	./.	./.	./.	1/1:2,0:2:3.01:51,3,0	./.	./.	1/1:3,0:3:6.02:102,6,0	./.	./.	1/1:2,0:2:3.01:50,3,0	./.	1/1:1,0:1:3.01:49,3,0	1/1:1,0:1:3.01:48,3,0	1/1:1,0:1:3.01:53,3,0	./.	./.
chr10	13177700	.	T	TGG	234.20	PASS	AB=0.944;AC=5;AF=0.093;AN=54;BaseQRankSum=4.665;DP=453;FS=12.596;HRun=0;HaplotypeScore=59.5237;InbreedingCoeff=0.8220;MQ=67.86;MQ0=2;MQRankSum=-4.583;QD=7.10;ReadPosRankSum=-0.658;VQSLOD=1.0777;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:72.14:0,72,1093	0/0:7,0:7:18.05:0,18,271	0/0:18,0:15:37.68:0,38,556	0/0:19,0:16:48.02:0,48,713	0/0:25,0:25:51.17:0,51,831	0/0:19,0:19:51.17:0,51,831	0/0:13,0:13:32.81:0,33,513	0/0:19,0:18:54.18:0,54,881	0/0:16,0:16:45.10:0,45,701	0/0:26,0:26:75.26:0,75,1223	0/0:17,0:17:48.16:0,48,782	0/0:9,0:9:24.08:0,24,392	0/0:9,0:9:27.08:0,27,417	0/0:8,0:8:21.07:0,21,342	0/0:11,0:11:33.11:0,33,538	0/0:13,0:13:33.11:0,33,538	0/0:22,0:22:54.17:0,54,849	0/1:16,1:17:0.21:0,0,590	1/1:3,3:4:12.04:215,12,0	1/1:0,10:4:9.03:127,9,0	./.	0/0:16,0:16:39.12:0,39,614	0/0:19,0:19:45.14:0,45,710	0/0:17,0:16:33.11:0,33,537	0/0:13,0:13:27.09:0,27,438	0/0:31,0:31:90.29:0,90,1423	0/0:25,0:25:69.22:0,69,1102	0/0:17,0:17:36.12:0,36,587
chr10	13177761	.	CT	C	3818.34	PASS	AB=0.642;AC=43;AF=0.768;AN=56;BaseQRankSum=-3.527;DP=451;FS=8.889;HRun=13;HaplotypeScore=56.3303;InbreedingCoeff=0.2561;MQ=51.69;MQ0=8;MQRankSum=1.295;QD=10.10;ReadPosRankSum=1.661;VQSLOD=2.4419;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:33:39.93:0,40,214	1/1:1,2:3:5.97:44,6,0	0/0:19,0:6:4.54:0,5,60	0/1:9,1:3:12.89:13,0,38	0/1:7,15:24:53.33:207,0,53	1/1:3,9:11:20.88:153,21,0	1/1:5,4:9:10.97:72,11,0	1/1:11,13:18:37.75:265,38,0	1/1:5,7:13:19.89:137,20,0	0/1:9,9:20:21.52:164,0,22	1/1:5,11:16:0.57:164,1,0	0/1:3,6:9:14.18:73,0,14	1/1:5,4:7:8.92:66,9,0	0/1:2,9:11:0.29:152,0,0	1/1:0,11:11:26.85:197,27,0	1/1:2,8:10:16.94:115,17,0	1/1:10,13:23:39.83:275,40,0	1/1:4,5:9:14.85:109,15,0	1/1:5,0:8:8.13:24,8,0	1/1:4,0:19:30.54:89,31,0	1/1:0,0:7:10.17:30,10,0	0/1:3,8:10:6.67:54,0,7	1/1:7,15:23:45.79:318,46,0	0/1:7,10:16:5.38:129,0,5	0/0:5,0:20:40.10:0,40,220	1/1:12,15:27:40.69:288,41,0	1/1:6,22:27:59.60:434,60,0	1/1:2,12:13:34.84:247,35,0
chr10	13179013	.	CT	C	825.67	PASS	AC=6;AF=0.111;AN=54;BaseQRankSum=6.855;DP=530;FS=10.636;HRun=3;HaplotypeScore=49.1344;InbreedingCoeff=0.8787;MQ=39.75;MQ0=68;MQRankSum=-3.090;QD=16.85;ReadPosRankSum=-0.134;VQSLOD=2.0643;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:25:23.99:0,24,285	0/0:8,0:4:12.04:0,12,172	./.	0/0:11,0:1:3.01:0,3,43	0/0:20,0:16:24.08:0,24,341	0/0:20,0:20:36.12:0,36,518	0/0:10,0:7:17.97:0,18,212	0/0:48,0:18:51.17:0,51,729	0/0:23,0:23:26.92:0,27,388	0/0:20,0:14:42.14:0,42,605	0/0:24,0:21:20.80:0,21,301	0/0:17,0:13:21.06:0,21,301	0/0:15,0:13:33.11:0,33,468	0/0:7,0:6:9.03:0,9,129	0/0:14,0:12:24.08:0,24,345	0/0:19,0:15:23.88:0,24,299	0/0:24,0:17:12.04:0,12,173	0/0:22,0:20:17.85:0,18,259	1/1:7,9:9:27.08:334,27,0	1/1:5,14:11:24.07:297,24,0	1/1:2,12:13:27.08:334,27,0	0/0:16,0:15:21.07:0,21,302	0/0:30,0:21:24.03:0,24,306	0/0:29,0:27:27.09:0,27,389	0/0:15,0:11:15.05:0,15,216	0/0:23,0:20:60.20:0,60,864	0/0:20,0:14:30.08:0,30,424	0/0:10,0:8:15.05:0,15,216
chr10	13180309	.	CCT	C	43.97	PASS	AB=0.835;AC=2;AF=0.067;AN=30;BaseQRankSum=2.820;DP=252;FS=0.000;HRun=0;HaplotypeScore=25.9452;InbreedingCoeff=-0.1868;MQ=14.02;MQ0=163;MQRankSum=-0.448;QD=1.69;ReadPosRankSum=1.976;VQSLOD=1.0042;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:1:3.01:0,3,61	0/1:9,1:5:42.53:43,0,55	./.	./.	0/0:9,0:3:3.01:0,3,61	./.	0/0:5,0:1:3.01:0,3,61	./.	./.	0/0:16,0:3:6.02:0,6,122	0/0:15,0:2:6.02:0,6,121	0/0:4,0:1:3.01:0,3,58	0/0:6,0:2:6.02:0,6,121	./.	./.	./.	./.	0/0:2,0:1:3.01:0,3,58	./.	0/1:11,5:8:82.17:82,0,167	./.	0/0:9,0:4:9.03:0,9,182	0/0:16,1:14:24.08:0,24,485	./.	0/0:16,0:7:15.05:0,15,303	0/0:9,0:2:6.02:0,6,108	./.	0/0:9,0:5:9.03:0,9,182
chr10	13181781	.	TAC	T	9013.33	PASS	AB=0.900;AC=44;AF=0.786;AN=56;BaseQRankSum=-7.748;DP=472;FS=2.613;HRun=0;HaplotypeScore=70.8550;InbreedingCoeff=0.6324;MQ=62.64;MQ0=3;MQRankSum=0.397;QD=22.93;ReadPosRankSum=2.984;VQSLOD=5.2611;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,24:28:54.17:648,54,0	1/1:1,6:7:15.05:180,15,0	0/0:16,0:12:11.98:0,12,126	0/0:20,0:17:13.03:0,13,299	1/1:4,29:33:78.16:901,78,0	0/0:17,0:17:26.72:0,27,555	0/1:5,0:5:3.37:3,0,107	1/1:14,17:31:51:524,51,0	1/1:4,15:19:39.12:468,39,0	1/1:4,23:27:71.53:745,72,0	1/1:2,12:14:36.11:427,36,0	1/1:1,8:9:21.06:252,21,0	1/1:0,9:9:24.07:288,24,0	1/1:3,12:15:24.07:288,24,0	1/1:1,12:13:27.08:324,27,0	1/1:3,8:11:21.06:252,21,0	1/1:6,14:20:5.16:428,5,0	0/1:5,10:15:11.29:261,0,11	0/1:18,0:15:2.95:3,0,89	0/0:25,1:26:21.06:0,21,431	0/1:6,0:6:11.77:12,0,67	1/1:0,11:11:27.04:308,27,0	1/1:3,12:15:33.10:396,33,0	1/1:1,7:8:21.06:252,21,0	1/1:3,11:14:27.08:324,27,0	1/1:2,21:23:63.12:689,63,0	1/1:5,15:20:39.12:468,39,0	1/1:5,17:22:48.15:575,48,0
chr10	13182157	.	T	TA	3602.93	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=12.849;DP=683;FS=6.175;HRun=2;HaplotypeScore=74.4649;InbreedingCoeff=0.9995;MQ=81.89;MQ0=0;MQRankSum=-0.836;QD=39.59;ReadPosRankSum=0.755;VQSLOD=4.0346;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:48:99:0,144,1749	0/0:11,0:11:30.08:0,30,359	0/0:27,0:27:75.23:0,75,919	0/0:14,0:14:39.12:0,39,483	0/0:34,0:34:99:0,102,1250	0/0:17,0:17:48.14:0,48,582	0/0:25,0:25:72.23:0,72,891	0/0:35,0:35:90.27:0,90,1094	0/0:39,0:39:99:0,117,1408	0/0:24,0:24:63.18:0,63,769	0/0:29,0:29:81.25:0,81,994	0/0:20,0:20:57.17:0,57,694	0/0:15,0:15:42.13:0,42,521	0/0:30,0:30:90.27:0,90,1101	0/0:25,0:25:75.22:0,75,916	0/0:18,0:18:54.17:0,54,669	0/0:26,0:26:72.21:0,72,879	0/0:10,0:10:30.07:0,30,355	1/1:1,25:26:69.21:969,69,0	1/1:1,26:27:78.26:1123,78,0	1/1:1,37:38:99:1511,105,0	0/0:18,0:18:51.16:0,51,632	0/0:29,0:29:78.23:0,78,953	0/0:21,0:20:63.20:0,63,781	0/0:12,0:12:36.11:0,36,446	0/0:33,0:33:96.29:0,96,1169	0/0:15,0:15:39.10:0,39,466	0/0:16,0:16:48.15:0,48,595
chr10	13182240	.	AAACCAACC	A	2413.23	PASS	AB=0.917;AC=9;AF=0.161;AN=56;BaseQRankSum=9.032;DP=604;FS=4.029;HRun=0;HaplotypeScore=155.6141;InbreedingCoeff=0.9348;MQ=67.45;MQ0=6;MQRankSum=-8.460;QD=27.74;ReadPosRankSum=2.524;VQSLOD=3.5011;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:38:45.15:0,45,1537	0/0:10,0:10:27.09:0,27,999	0/0:37,0:24:18.06:0,18,624	0/0:16,0:9:10.85:0,11,367	0/0:23,0:23:45.15:0,45,1829	1/1:9,18:27:39.13:987,39,0	1/1:8,10:18:27.09:684,27,0	0/0:26,0:26:27.09:0,27,1074	0/0:27,0:27:54.19:0,54,2233	0/0:20,0:20:39.13:0,39,1596	0/0:26,0:26:42.14:0,42,1668	0/0:19,0:19:36.12:0,36,1408	0/0:17,0:17:27.09:0,27,1109	0/0:23,0:23:39.11:0,39,1488	0/0:25,0:25:45.15:0,45,1791	0/0:16,0:16:33.11:0,33,1281	0/0:31,0:31:66.18:0,66,2613	0/0:17,0:17:36.12:0,36,1353	1/1:6,0:10:12.04:224,12,0	1/1:10,0:21:37.37:675,37,0	0/1:10,0:11:0:0,0,0	0/0:17,0:17:36.12:0,36,1484	0/0:26,0:27:57.18:0,57,2255	0/0:23,0:24:54.17:0,54,2133	0/0:8,0:16:36.12:0,36,1284	0/0:25,0:25:51.18:0,51,2012	0/0:23,0:24:48.16:0,48,1952	0/0:13,0:13:36.12:0,36,1446
chr10	13182638	.	AT	A	1532.43	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-10.131;DP=571;FS=0.460;HRun=12;HaplotypeScore=104.2970;InbreedingCoeff=0.8924;MQ=72.86;MQ0=0;MQRankSum=-2.146;QD=14.19;ReadPosRankSum=4.258;VQSLOD=3.8606;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:2,0:17:25.57:0,26,129	0/0:2,0:16:34.09:0,34,172	0/0:13,0:12:5.72:0,6,155	0/0:9,0:9:3.51:0,4,129	0/0:4,0:34:83.45:0,83,458	1/1:1,18:19:53.79:418,54,0	1/1:4,10:14:29.85:232,30,0	0/0:8,0:27:57.39:0,57,308	0/0:1,0:14:25.87:0,26,141	0/0:3,0:26:65.75:0,66,344	0/0:2,0:26:63.47:0,63,354	0/0:4,0:16:8.81:0,9,54	0/0:2,0:20:34.39:0,34,186	0/0:4,0:18:30.14:0,30,170	0/0:3,0:19:22.38:0,22,107	0/0:3,0:13:25.57:0,26,129	0/0:4,0:26:39.77:0,40,201	0/0:3,0:7:8.52:0,9,43	1/1:5,12:17:8.37:248,8,0	1/1:10,30:42:73.61:563,74,0	1/1:4,11:16:21.40:241,21,0	0/0:3,0:24:52.63:0,53,272	0/0:5,0:28:51.33:0,51,275	0/0:1,0:8:17.13:0,17,89	0/0:1,0:22:39.88:0,40,205	0/0:4,0:25:61.09:0,61,345	0/0:5,0:29:51.39:0,51,269	0/0:3,0:25:54.10:0,54,278
chr10	13182713	.	CT	C	1943.89	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=7.953;DP=578;FS=1.618;HRun=6;HaplotypeScore=112.6489;InbreedingCoeff=0.9900;MQ=81.87;MQ0=0;MQRankSum=-1.806;QD=27.00;ReadPosRankSum=-0.390;VQSLOD=2.7830;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:78.20:0,78,974	0/0:12,0:12:33.11:0,33,428	0/0:19,0:19:39.48:0,39,416	0/0:11,0:11:18.03:0,18,193	0/0:35,0:35:90.24:0,90,1121	0/0:23,0:23:63.20:0,63,804	0/0:19,0:19:57.18:0,57,737	0/0:29,0:29:81.26:0,81,1038	0/0:14,0:14:42.12:0,42,531	0/0:33,0:33:90.29:0,90,1153	0/0:14,0:14:42.14:0,42,544	0/0:15,0:15:39.13:0,39,503	0/0:11,0:11:24.06:0,24,285	0/0:13,0:13:30.06:0,30,369	0/0:14,0:14:30.10:0,30,389	0/0:17,0:17:51.17:0,51,662	0/0:19,0:19:48.11:0,48,578	0/0:5,0:5:15.05:0,15,195	1/1:1,20:21:57.13:612,57,0	1/1:5,25:30:78.17:830,78,0	1/1:0,21:21:60.15:645,60,0	0/0:27,0:27:63.20:0,63,809	0/0:31,0:31:72.23:0,72,933	0/0:13,0:13:36.12:0,36,467	0/0:36,0:36:99:0,108,1366	0/0:27,0:27:72.22:0,72,919	0/0:29,0:28:84.26:0,84,1071	0/0:14,0:14:30.10:0,30,389
chr10	13183381	.	T	TG	277.74	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=5.822;DP=538;FS=4.111;HRun=0;HaplotypeScore=58.8153;InbreedingCoeff=0.8894;MQ=104.22;MQ0=0;MQRankSum=-4.906;QD=23.14;ReadPosRankSum=-0.338;VQSLOD=4.7973;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:35:99:0,105,1448	0/0:8,0:8:24.08:0,24,335	0/0:33,0:33:93.31:0,93,1276	0/0:42,0:42:99:0,110,1495	0/0:14,0:14:42.14:0,42,584	0/0:18,0:18:54.17:0,54,738	0/0:18,0:18:51.16:0,51,696	0/0:30,0:30:87.28:0,87,1187	0/0:32,0:32:96.32:0,96,1341	0/0:24,0:24:72.24:0,72,1007	0/0:17,0:17:51.17:0,51,712	0/0:21,0:21:63.20:0,63,862	0/0:11,0:11:33.11:0,33,461	0/0:22,0:22:66.22:0,66,921	0/0:20,0:20:60.20:0,60,838	0/0:15,0:15:45.14:0,45,611	0/0:24,0:24:72.24:0,72,1006	0/0:23,0:23:63.21:0,63,881	1/1:0,1:1:3.01:41,3,0	1/1:1,7:8:24.07:304,24,0	1/1:1,2:3:5.93:56,6,0	0/0:12,0:12:36.12:0,36,490	0/0:13,0:13:39.13:0,39,539	0/0:26,0:26:78.26:0,78,1091	0/0:13,0:13:39.08:0,39,522	0/0:21,0:21:63.20:0,63,866	0/0:16,0:16:45.15:0,45,628	0/0:16,0:16:48.16:0,48,671
chr10	13184104	.	TG	T	1600.40	PASS	AB=0.983;AC=8;AF=0.143;AN=56;BaseQRankSum=10.061;DP=586;FS=2.583;HRun=2;HaplotypeScore=48.7867;InbreedingCoeff=0.8041;MQ=51.34;MQ0=47;MQRankSum=-4.379;QD=13.68;ReadPosRankSum=-0.966;VQSLOD=2.4331;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:87.30:0,87,1390	0/0:11,0:11:27.06:0,27,395	0/1:28,1:2:31.65:32,0,41	0/1:19,0:2:0:0,0,0	0/0:24,0:24:51.17:0,51,809	0/0:15,0:15:36.11:0,36,552	0/0:28,0:27:54.18:0,54,857	0/0:19,0:11:33.11:0,33,522	0/0:22,0:22:51.16:0,51,792	0/0:18,0:18:54.17:0,54,839	0/0:11,0:11:30.10:0,30,479	0/0:21,0:21:42.01:0,42,667	0/0:16,0:16:33.11:0,33,524	0/0:18,0:17:36.11:0,36,552	0/0:31,0:31:54.18:0,54,859	0/0:19,0:19:51.17:0,51,811	0/0:25,0:25:60.16:0,60,927	0/0:20,0:20:42.14:0,42,662	1/1:3,18:16:48.16:671,48,0	1/1:0,13:13:30.10:419,30,0	1/1:1,33:29:45.62:627,46,0	0/0:25,0:23:45.15:0,45,716	0/0:19,0:19:39.13:0,39,622	0/0:20,0:20:42.14:0,42,672	0/0:15,0:15:30.10:0,30,480	0/0:18,0:18:54.18:0,54,858	0/0:20,0:20:48.16:0,48,747	0/0:15,0:15:33.11:0,33,517
chr10	13184389	.	TG	T	410.81	PASS	AB=0.574;AC=1;AF=0.021;AN=48;BaseQRankSum=5.380;DP=644;FS=32.962;HRun=1;HaplotypeScore=44.5694;InbreedingCoeff=-0.0556;MQ=28.67;MQ0=316;MQRankSum=2.274;QD=13.25;ReadPosRankSum=-0.243;VQSLOD=0.5723;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:7:15.05:0,15,237	0/0:12,0:10:24.08:0,24,370	0/0:26,0:3:3.01:0,3,48	0/0:20,0:2:3.48:0,3,49	0/0:30,0:28:27.09:0,27,426	./.	0/0:19,0:4:6.02:0,6,95	./.	0/0:24,0:9:21.07:0,21,329	0/0:29,0:19:51.13:0,51,784	0/0:17,0:14:15.05:0,15,237	0/0:19,0:7:15.05:0,15,237	0/0:15,0:6:15.05:0,15,237	0/0:17,0:4:12.04:0,12,190	0/0:22,0:12:36.12:0,36,557	0/0:18,0:7:18.06:0,18,285	0/0:24,0:4:6.02:0,6,95	0/0:23,0:5:9.03:0,9,143	./.	0/1:8,23:25:99:484,0,106	./.	0/0:44,0:33:51.11:0,51,775	0/0:26,0:22:21.07:0,21,331	0/0:23,0:3:8.96:0,9,113	0/0:32,0:27:54:0,54,825	0/0:32,0:19:54.18:0,54,852	0/0:21,0:8:18.06:0,18,275	0/0:17,0:14:14.95:0,15,238
chr10	13184888	.	T	TC	15461.51	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-2.016;DP=679;FS=0.664;HRun=3;HaplotypeScore=84.7359;InbreedingCoeff=0.9385;MQ=54.73;MQ0=24;MQRankSum=-2.638;QD=24.86;ReadPosRankSum=5.313;VQSLOD=3.8645;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,52:52:99:1607,120,0	1/1:1,5:6:15.05:209,15,0	0/0:28,0:21:63.16:0,63,729	0/0:26,3:19:48:0,48,539	1/1:3,7:7:12.04:168,12,0	1/1:2,19:17:39.13:546,39,0	1/1:3,33:27:72.24:1007,72,0	1/1:7,18:9:11.98:126,12,0	1/1:2,41:22:48.16:671,48,0	1/1:1,18:14:33.11:452,33,0	1/1:1,4:6:12:146,12,0	1/1:2,19:18:45.58:607,46,0	1/1:0,21:11:30.06:397,30,0	1/1:3,23:13:30.05:385,30,0	1/1:3,20:16:36.08:481,36,0	1/1:2,26:22:51.17:713,51,0	1/1:3,31:29:69.23:966,69,0	1/1:0,14:12:27.09:378,27,0	1/1:2,17:9:21.07:291,21,0	1/1:0,16:16:42.14:587,42,0	1/1:7,70:73:99:2498,180,0	1/1:0,7:7:18.02:229,18,0	1/1:1,9:10:27.09:377,27,0	1/1:2,29:24:60.20:838,60,0	1/1:2,12:12:33.08:440,33,0	1/1:4,17:14:30.10:420,30,0	1/1:0,23:14:35.95:503,36,0	1/1:0,10:10:30.10:420,30,0
chr10	13184991	.	AACACACACACAC	A	2516.95	PASS	AB=0.876;AC=32;AF=0.640;AN=50;BaseQRankSum=-2.932;DP=642;FS=7.407;HRun=0;HaplotypeScore=103.4834;InbreedingCoeff=-0.0136;MQ=26.37;MQ0=326;MQRankSum=-1.937;QD=5.85;ReadPosRankSum=1.104;VQSLOD=1.3532;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:24:18.01:0,18,600	1/1:7,4:6:3.01:104,3,0	./.	./.	1/1:24,1:10:2.99:24,3,0	1/1:18,0:13:3.24:19,3,0	0/0:19,0:8:5.93:0,6,55	1/1:26,0:13:2.97:20,3,0	1/1:21,1:16:8.96:226,9,0	0/1:29,2:11:99:278,0,503	0/0:11,2:4:2.25:0,2,9	0/1:24,7:22:99:348,0,118	1/1:16,2:6:2.35:41,2,0	0/1:24,0:12:56.48:56,0,58	1/1:16,5:13:9.03:189,9,0	0/1:24,2:17:99:370,0,137	1/1:5,4:5:3.01:104,3,0	1/1:9,0:4:3.01:49,3,0	0/0:15,0:4:3:0,3,26	1/1:21,0:3:0.34:0,0,0	1/1:32,0:8:0.89:2,1,0	./.	0/1:18,1:8:14.65:15,0,47	1/1:22,8:18:2.87:19,3,0	0/0:17,0:11:17.78:0,18,499	0/1:15,6:12:99:334,0,110	0/1:15,5:10:99:374,0,152	0/1:10,1:6:88.98:89,0,328
chr10	13185044	.	A	AT	113.05	PASS	AB=0.982;AC=15;AF=0.326;AN=46;BaseQRankSum=5.072;DP=482;FS=12.177;HRun=0;HaplotypeScore=99.0762;InbreedingCoeff=0.0993;MQ=35.81;MQ0=180;MQRankSum=-2.355;QD=0.57;ReadPosRankSum=-0.880;VQSLOD=1.0884;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:17:14.94:0,15,279	0/0:13,0:8:3.01:0,3,38	0/0:30,0:7:14.91:0,15,177	0/0:40,0:2:6.02:0,6,67	0/0:21,0:14:2.66:0,3,41	1/1:11,0:11:6.96:38,7,0	0/0:10,0:6:0:0,0,0	./.	0/0:16,0:9:9.03:0,9,116	0/1:32,3:27:90.45:90,0,544	1/1:16,0:13:1.76:5,2,0	0/1:19,1:14:4.49:4,0,171	0/1:13,0:9:6.27:6,0,108	1/1:11,1:10:4.28:18,4,0	0/0:16,0:13:6.49:0,6,84	0/1:23,0:19:26.29:26,0,211	0/1:16,0:6:6.76:7,0,31	./.	0/0:2,0:1:1.25:0,1,3	./.	./.	./.	0/1:18,0:14:1.01:1,0,37	1/1:22,0:14:2.64:11,3,0	0/0:13,1:12:15.03:0,15,198	0/0:30,0:17:42:0,42,552	0/0:16,0:14:2.42:0,2,160	0/1:12,0:9:32.48:32,0,130
chr10	13185045	.	G	GC	155.40	PASS	AB=0.973;AC=23;AF=0.479;AN=48;BaseQRankSum=5.677;DP=474;FS=15.256;HRun=0;HaplotypeScore=97.4083;InbreedingCoeff=0.0215;MQ=35.96;MQ0=182;MQRankSum=-3.353;QD=0.63;ReadPosRankSum=-1.125;VQSLOD=0.2886;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:17:17.98:0,18,314	0/1:13,0:8:14.88:15,0,35	0/0:31,0:7:14.95:0,15,163	0/0:42,0:2:5.98:0,6,59	0/0:20,0:14:2.66:0,3,41	1/1:9,0:11:9.58:50,10,0	1/1:9,0:5:2.96:20,3,0	./.	0/0:13,0:7:9.03:0,9,124	0/1:30,3:26:65.90:66,0,562	1/1:15,0:13:1.78:6,2,0	0/1:19,1:14:14.01:14,0,163	0/1:13,0:9:3.69:4,0,79	1/1:10,1:9:3.72:14,4,0	0/1:14,0:11:10.43:10,0,75	0/1:22,0:18:14.50:15,0,220	0/1:15,0:6:3.08:3,0,35	./.	1/1:2,0:1:0.89:2,1,0	0/1:2,0:2:0:0,0,0	./.	./.	0/1:18,0:14:1.01:1,0,37	1/1:22,0:14:2.19:7,2,0	0/1:13,1:12:1.87:2,0,190	0/0:30,0:17:41.99:0,42,542	0/0:16,0:14:6.15:0,6,166	0/1:11,0:9:61.65:62,0,120
chr10	13185046	.	A	ACAGGCACATGCC	5184.48	PASS	AB=0.965;AC=28;AF=0.583;AN=48;BaseQRankSum=-1.680;DP=486;FS=21.164;HRun=0;HaplotypeScore=123.1842;InbreedingCoeff=-0.4380;MQ=35.68;MQ0=190;MQRankSum=-5.177;QD=15.16;ReadPosRankSum=-2.087;VQSLOD=1.9465;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:16:85.44:85,0,677	0/1:13,0:8:53.80:54,0,103	0/0:33,0:7:1.14:0,1,435	0/0:43,0:2:3.01:0,3,51	0/0:17,3:16:2.97:0,3,112	1/1:8,0:10:16.71:436,17,0	1/1:9,0:5:6.02:80,6,0	./.	0/1:14,0:7:94.40:94,0,278	0/1:34,0:27:99:1173,0,921	1/1:16,0:14:4.20:37,4,0	0/1:20,0:14:99:411,0,423	0/1:11,1:8:99:415,0,100	1/1:11,0:9:2.89:107,3,0	0/1:13,0:10:99:103,0,209	0/1:21,0:18:99:613,0,381	0/1:15,0:6:42.42:109,0,42	./.	1/1:2,0:1:3.01:83,3,0	1/1:3,0:3:2.97:20,3,0	./.	./.	0/1:15,4:15:99:102,0,106	1/1:23,0:14:0.86:107,1,0	0/1:15,0:12:21.84:22,0,457	0/1:30,0:17:10.99:11,0,1288	0/1:15,1:14:99:283,0,336	0/1:11,0:9:99:838,0,197
chr10	13186686	.	G	GACA	33.58	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=5.376;DP=946;FS=9.605;HRun=0;HaplotypeScore=331.7693;InbreedingCoeff=0.6799;MQ=48.43;MQ0=20;MQRankSum=-3.766;QD=0.53;ReadPosRankSum=-3.743;VQSLOD=0.5766;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,1:37:51.20:0,51,1188	0/0:12,0:12:33.11:0,33,561	0/0:56,0:34:94.19:0,94,1462	0/0:62,0:37:99:0,102,1650	0/0:26,0:25:57.20:0,57,991	0/0:22,0:19:54.18:0,54,905	0/0:38,0:36:75.20:0,75,1321	0/0:31,0:26:72.24:0,72,1230	0/0:44,0:36:86.99:0,87,1486	0/0:46,0:45:99:0,126,2161	0/0:23,0:23:48.15:0,48,819	0/0:35,0:34:90.26:0,90,1530	0/0:45,0:42:99:0,123,2122	0/0:31,0:29:75.24:0,75,1273	0/0:50,0:48:99:0,129,2264	0/0:37,0:37:99:0,108,1869	0/0:27,0:25:58.89:0,59,1068	0/0:19,0:18:54.19:0,54,952	0/0:29,0:21:52.41:0,52,748	0/1:35,0:30:7.10:7,0,103	1/1:25,3:26:18.19:123,18,0	0/0:48,0:48:99:0,102,1720	0/0:27,0:27:54.18:0,54,952	0/0:41,0:41:96.33:0,96,1649	0/0:26,0:26:57.20:0,57,999	0/0:36,0:36:99:0,99,1726	0/0:24,0:20:48:0,48,840	0/0:7,0:7:21.07:0,21,359
chr10	13186710	.	GACA	G	125.18	PASS	AB=0.917;AC=3;AF=0.054;AN=56;BaseQRankSum=4.926;DP=818;FS=0.988;HRun=0;HaplotypeScore=316.8471;InbreedingCoeff=0.6718;MQ=48.07;MQ0=8;MQRankSum=-4.113;QD=2.28;ReadPosRankSum=-4.217;VQSLOD=1.3766;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:37:69.14:0,69,1517	0/0:11,0:11:33.04:0,33,668	0/0:37,0:28:9.66:0,10,1573	0/0:42,0:32:62.53:0,63,1945	0/0:15,0:15:30.02:0,30,585	0/0:18,0:15:36.12:0,36,849	0/0:40,1:39:71.87:0,72,1473	0/0:29,0:25:75.26:0,75,1685	0/0:41,0:36:84.21:0,84,1916	0/0:43,0:41:99:0,114,2637	0/0:25,0:24:36:0,36,796	0/0:32,0:32:72.20:0,72,1647	0/0:37,0:35:96.27:0,96,2107	0/0:27,0:27:68.92:0,69,1560	0/0:45,0:43:99:0,114,2573	0/0:26,0:26:72.20:0,72,1552	0/0:24,0:23:57.12:0,57,1177	0/0:19,0:18:42.14:0,42,870	1/1:20,2:18:20.71:181,21,0	0/1:30,3:30:7.88:49,0,8	0/0:14,10:23:15.29:0,15,68	0/0:32,0:32:74.95:0,75,1410	0/0:23,0:23:54.06:0,54,1097	0/0:37,0:37:78.14:0,78,1701	0/0:25,0:24:63.13:0,63,1334	0/0:38,0:37:99:0,105,2401	0/0:26,0:22:54.02:0,54,1231	0/0:7,0:7:18.06:0,18,352
chr10	13186713	.	A	ATG	203.07	PASS	AB=0.768;AC=3;AF=0.054;AN=56;BaseQRankSum=5.657;DP=792;FS=11.238;HRun=0;HaplotypeScore=300.1795;InbreedingCoeff=0.4163;MQ=47.97;MQ0=4;MQRankSum=-3.971;QD=2.71;ReadPosRankSum=-0.076;VQSLOD=0.8217;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:36:69.09:0,69,1006	0/0:11,0:11:33.04:0,33,481	0/0:35,0:28:62.40:0,62,1169	0/0:37,0:32:93.20:0,93,1363	0/0:13,0:13:30.02:0,30,431	0/0:17,0:15:36.12:0,36,587	0/0:39,0:37:68.86:0,69,1009	0/0:29,0:24:72.25:0,72,1169	0/0:42,0:36:84.21:0,84,1306	0/0:40,0:38:99:0,108,1724	0/0:25,0:24:36.55:0,37,553	0/0:32,0:31:72.20:0,72,1145	0/0:37,0:34:93.19:0,93,1384	0/0:29,0:27:69.04:0,69,1081	0/0:43,0:41:99:0,108,1727	0/0:24,0:24:69.13:0,69,1035	0/0:23,0:22:54.15:0,54,844	0/0:18,0:17:39.13:0,39,636	0/1:13,7:15:1.12:169,0,1	0/1:16,15:30:0.86:111,0,1	0/1:21,3:23:22.66:23,0,23	0/0:32,0:32:74.95:0,75,1020	0/0:25,0:23:54.05:0,54,787	0/0:37,0:37:78:0,78,1143	0/0:24,0:23:60.12:0,60,920	0/0:37,0:36:99:0,102,1646	0/0:25,0:21:51.17:0,51,832	0/0:6,0:6:18.06:0,18,287
chr10	13187309	.	TCTATCTATCTATCTATCTATCTATCTAC	T	483.72	PASS	AB=1.000;AC=6;AF=0.115;AN=52;BaseQRankSum=-2.792;DP=683;FS=19.415;HRun=0;HaplotypeScore=385.2854;InbreedingCoeff=0.3144;MQ=57.30;MQ0=11;MQRankSum=-1.872;QD=4.79;ReadPosRankSum=2.799;VQSLOD=0.8946;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:18,18:36:3.01:205,3,0	0/0:12,0:12:9.50:0,10,827	./.	./.	0/0:29,0:29:9.03:0,9,403	0/0:18,0:17:8.77:0,9,262	0/1:24,0:23:5.58:6,0,415	0/0:42,0:42:1.19:0,1,242	0/0:12,0:12:12.04:0,12,1101	0/0:32,0:32:56.87:0,57,3529	0/0:24,0:23:12.51:0,13,919	0/0:24,0:23:12.04:0,12,1035	0/0:20,0:20:14.63:0,15,3266	0/0:22,0:22:26.03:0,26,2240	0/0:23,0:23:21.07:0,21,1916	0/0:14,0:14:9.03:0,9,828	0/0:20,0:20:9.03:0,9,769	0/0:27,0:27:4.01:0,4,4830	0/0:30,0:29:11.64:0,12,2723	0/0:29,0:14:18.06:0,18,1296	0/0:33,0:33:20.60:0,21,2496	0/0:31,0:29:26.20:0,26,4256	0/0:30,0:30:6.49:0,6,547	0/1:13,0:13:17.86:18,0,1982	1/1:6,22:27:6.02:365,6,0	0/0:29,0:28:13.61:0,14,2293	0/0:28,0:27:15.05:0,15,1241	0/0:14,0:14:9.03:0,9,826
chr10	13187329	.	TCTATCTAC	T	2398.47	PASS	AB=1.000;AC=22;AF=0.393;AN=56;BaseQRankSum=-8.299;DP=626;FS=4.550;HRun=0;HaplotypeScore=158.2614;InbreedingCoeff=-0.0369;MQ=55.16;MQ0=19;MQRankSum=-1.390;QD=5.75;ReadPosRankSum=-11.174;VQSLOD=-0.3835;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:24:3.01:45,3,0	0/0:9,0:9:8.29:0,8,40	0/0:19,0:4:2.71:0,3,20	0/0:24,0:6:8.94:0,9,66	0/1:23,0:23:10.52:110,0,11	1/1:3,14:17:7.70:41,8,0	1/1:26,0:23:29.68:245,30,0	1/1:34,0:31:57.68:394,58,0	0/0:19,0:19:11.23:0,11,54	0/1:29,0:29:22.20:219,0,22	0/0:23,0:22:1.39:0,1,21	0/0:21,0:20:11.08:0,11,50	0/1:20,0:20:99:173,0,587	0/1:23,0:23:99:187,0,308	0/0:21,0:21:19.57:0,20,92	0/0:11,0:11:8.50:0,8,43	0/1:16,0:16:7.02:7,0,18	0/1:32,0:32:99:150,0,662	0/1:23,0:22:99:185,0,238	0/1:22,0:12:54.96:55,0,59	0/1:34,0:34:99:242,0,108	0/1:32,0:30:99:140,0,436	0/0:23,0:23:5.54:0,6,26	0/1:17,0:17:11.78:156,0,12	1/1:22,0:21:5.98:60,6,0	0/1:23,0:22:32.54:157,0,33	0/0:24,0:23:10.66:0,11,52	0/0:15,0:14:8.39:0,8,40
chr10	13187333	.	TCTAC	T	6717.12	PASS	AB=1.000;AC=46;AF=0.821;AN=56;BaseQRankSum=-6.045;DP=619;FS=0.590;HRun=0;HaplotypeScore=115.4002;InbreedingCoeff=0.0930;MQ=55.16;MQ0=20;MQRankSum=0.369;QD=11.68;ReadPosRankSum=-5.437;VQSLOD=1.8443;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:23:2.97:20,3,0	1/1:0,9:9:8.83:170,9,0	0/0:21,0:2:2.67:0,3,20	0/0:23,0:3:8.94:0,9,66	1/1:23,0:23:20.79:151,21,0	1/1:15,0:15:5.88:36,6,0	1/1:27,0:24:32.56:265,33,0	1/1:28,0:25:65.37:453,65,0	1/1:0,19:19:12.04:226,12,0	1/1:1,29:30:71.16:885,71,0	1/1:3,22:24:12.23:188,12,0	1/1:0,19:18:12.04:226,12,0	0/1:22,0:22:99:236,0,314	0/1:21,0:21:99:202,0,156	1/1:0,22:22:21.07:396,21,0	1/1:1,10:11:9.03:167,9,0	1/1:0,15:15:9.03:166,9,0	0/1:31,0:31:99:224,0,402	0/1:21,0:21:39.19:244,0,39	0/1:23,0:14:34.10:55,0,34	1/1:35,0:35:12.52:263,13,0	0/1:34,0:32:99:263,0,269	1/1:1,21:22:5.91:113,6,0	1/1:13,4:17:45.04:611,45,0	1/1:22,0:21:5.90:37,6,0	1/1:1,21:21:60:687,60,0	1/1:0,24:23:15.05:264,15,0	1/1:1,14:14:9.03:169,9,0
chr10	13189279	.	T	TACACACACACACACAC	14820.45	PASS	AC=48;AF=0.923;AN=52;BaseQRankSum=-1.611;DP=544;FS=11.433;HRun=0;HaplotypeScore=253.6070;InbreedingCoeff=0.4300;MQ=45.27;MQ0=10;MQRankSum=-0.357;QD=32.72;ReadPosRankSum=3.216;VQSLOD=1.7714;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:27:7.77:390,8,0	1/1:11,0:7:9.03:544,9,0	0/0:37,0:20:13.59:0,14,220	./.	1/1:24,2:25:6.02:331,6,0	1/1:19,0:20:3.01:129,3,0	1/1:17,0:21:15.05:674,15,0	1/1:19,0:16:21.06:657,21,0	1/1:21,2:23:24.08:1178,24,0	1/1:22,1:23:27.09:1286,27,0	1/1:26,0:23:4.70:250,5,0	1/1:12,1:13:12.04:517,12,0	1/1:11,0:11:12.04:594,12,0	1/1:11,0:11:6.02:138,6,0	1/1:17,0:17:6.02:260,6,0	1/1:15,0:16:21.04:1010,21,0	1/1:15,1:18:18.06:1168,18,0	1/1:15,1:14:17.27:743,17,0	1/1:15,0:15:10.85:430,11,0	1/1:19,0:20:3.01:169,3,0	1/1:14,0:13:11.96:256,12,0	0/0:15,0:14:0.89:0,1,2	./.	1/1:14,1:15:9.03:624,9,0	1/1:17,1:17:8.54:614,9,0	1/1:33,0:32:33.11:1532,33,0	1/1:19,1:19:12.04:684,12,0	1/1:12,0:13:13.29:645,13,0
chr10	13189708	.	AAGAGC	A	656.13	PASS	AB=0.565;AC=3;AF=0.058;AN=52;BaseQRankSum=4.544;DP=469;FS=33.138;HRun=0;HaplotypeScore=83.3733;InbreedingCoeff=0.5171;MQ=28.74;MQ0=122;MQRankSum=-2.898;QD=21.87;ReadPosRankSum=1.604;VQSLOD=1.1880;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:20:39.13:0,39,1232	0/0:7,0:5:12.04:0,12,379	./.	./.	0/0:23,0:18:27.07:0,27,851	0/0:18,0:15:42.14:0,42,1302	0/0:22,0:18:33.11:0,33,1044	0/0:27,0:16:45.15:0,45,1371	0/0:11,0:5:9.03:0,9,283	0/0:20,0:17:48.13:0,48,1407	0/0:18,0:18:24.08:0,24,728	0/0:12,0:11:27.09:0,27,853	0/0:13,0:13:30.10:0,30,948	0/0:11,0:9:18.06:0,18,551	0/0:9,0:5:15.05:0,15,474	0/0:12,0:9:24.08:0,24,726	0/0:38,0:27:57.67:0,58,1799	0/0:27,0:10:18.06:0,18,549	0/1:3,10:9:71.05:432,0,71	1/1:6,11:14:15.05:325,15,0	0/0:17,2:2:6.02:0,6,190	0/0:7,0:7:15.05:0,15,471	0/0:10,0:9:21.07:0,21,639	0/0:36,0:26:57.20:0,57,1767	0/0:14,0:9:18.06:0,18,524	0/0:23,0:17:51.14:0,51,1540	0/0:14,0:11:30.10:0,30,917	0/0:17,0:8:12.04:0,12,380
chr10	13189759	.	C	CT	1547.11	PASS	AB=0.923;AC=36;AF=0.643;AN=56;BaseQRankSum=-2.555;DP=392;FS=2.248;HRun=7;HaplotypeScore=68.6574;InbreedingCoeff=0.2942;MQ=51.85;MQ0=42;MQRankSum=2.435;QD=5.37;ReadPosRankSum=-0.647;VQSLOD=-0.2850;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:17:14.85:0,15,117	1/1:1,0:1:3:25,3,0	0/0:38,0:11:16.78:0,17,108	0/1:27,0:3:0.02:0,0,0	1/1:18,0:16:18.66:121,19,0	0/0:8,0:8:10.67:0,11,65	0/0:18,0:18:31.44:0,31,193	1/1:5,5:5:12.13:112,12,0	0/1:13,0:9:4.99:59,0,5	0/1:7,4:11:5.24:90,0,5	1/1:3,3:5:5.65:55,6,0	0/0:10,0:9:0.61:0,1,25	0/1:11,0:11:29.81:40,0,30	1/1:13,0:12:11.86:101,12,0	1/1:4,0:1:2.97:20,3,0	1/1:6,7:12:11.52:115,12,0	1/1:8,22:32:11.28:310,11,0	1/1:6,6:10:8.61:80,9,0	0/1:19,0:19:13.91:14,0,105	1/1:17,0:17:7:93,7,0	0/1:6,0:4:9.46:9,0,22	1/1:3,0:3:4.25:29,4,0	1/1:6,0:5:7.48:51,7,0	0/1:25,1:23:32.51:33,0,34	0/0:12,0:11:11.92:0,12,99	0/1:6,5:8:16.61:64,0,17	1/1:14,0:13:19.83:153,20,0	1/1:12,1:9:15.90:148,16,0
chr10	13189767	.	CT	C	184.16	PASS	AB=0.744;AC=4;AF=0.071;AN=56;BaseQRankSum=3.758;DP=363;FS=23.197;HRun=9;HaplotypeScore=55.5015;InbreedingCoeff=0.2673;MQ=56.09;MQ0=14;MQRankSum=-4.489;QD=4.72;ReadPosRankSum=1.027;VQSLOD=-0.0522;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:39.06:0,39,435	0/0:1,0:1:3.01:0,3,35	0/0:40,0:13:16.63:0,17,233	0/0:30,0:6:8.97:0,9,81	0/0:15,0:15:30.09:0,30,346	0/0:6,0:6:12.03:0,12,130	0/0:19,0:19:38.60:0,39,413	0/0:9,0:7:15.43:0,15,156	0/0:13,0:12:27.04:0,27,297	0/0:10,0:10:12.04:0,12,139	0/0:5,0:4:12.04:0,12,138	0/0:8,0:8:15:0,15,157	0/0:10,0:10:16.84:0,17,164	0/0:12,0:11:27.08:0,27,311	0/0:1,0:1:3.01:0,3,35	0/0:11,0:11:15.93:0,16,174	0/0:34,0:34:46.97:0,47,480	0/0:9,0:9:9.03:0,9,103	0/1:13,6:19:99:109,0,127	0/1:10,6:16:8.05:126,0,8	1/1:1,3:3:6:54,6,0	0/0:3,0:3:6.02:0,6,69	0/0:5,0:5:15.04:0,15,173	0/0:25,0:25:54.34:0,54,603	0/0:13,0:13:30.09:0,30,346	0/0:9,0:8:8.98:0,9,89	0/0:10,0:10:23.99:0,24,260	0/0:9,0:9:15.04:0,15,173
chr10	13190435	.	TCTCTCTCTCTCTCTCTCGCTCTCG	T	5983.78	PASS	AB=0.990;AC=32;AF=0.571;AN=56;BaseQRankSum=2.560;DP=470;FS=1.043;HRun=0;HaplotypeScore=241.7939;InbreedingCoeff=0.0054;MQ=42.44;MQ0=44;MQRankSum=-4.814;QD=20.35;ReadPosRankSum=4.378;VQSLOD=3.0540;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:27:49.29:0,49,907	0/1:6,0:6:54.40:81,0,54	0/0:30,0:5:7.57:0,8,45	0/0:56,0:9:14.13:0,14,182	1/1:17,0:17:11.41:450,11,0	0/0:17,0:16:24.84:0,25,1308	0/0:23,0:23:39.04:0,39,1287	0/1:21,0:20:35.48:137,0,35	1/1:19,1:20:12.87:810,13,0	1/1:17,1:18:12.20:615,12,0	0/1:6,0:6:15.46:15,0,49	0/1:15,0:14:71.88:208,0,72	1/1:4,0:4:3.01:125,3,0	0/1:11,0:11:19.37:281,0,19	0/1:13,0:13:21.59:113,0,22	1/1:9,1:10:3.83:590,4,0	0/1:15,0:13:75.22:152,0,75	1/1:7,0:7:13.85:271,14,0	0/1:24,0:19:14.06:14,0,241	1/1:15,0:15:3.01:38,3,0	0/0:16,0:12:0.44:0,0,1	0/1:12,0:12:5.04:522,0,5	1/1:17,0:14:14.79:205,15,0	0/1:12,0:11:14.49:127,0,14	0/1:20,0:20:38.54:39,0,473	0/1:11,1:12:52.04:429,0,52	1/1:7,0:6:8.86:191,9,0	1/1:11,0:10:6.57:573,7,0
chr10	13190437	.	TCTCTCTCTCTCTCTCGCTCTCG	T	9014.11	PASS	AB=0.992;AC=42;AF=0.750;AN=56;BaseQRankSum=-1.014;DP=471;FS=0.543;HRun=0;HaplotypeScore=222.1489;InbreedingCoeff=0.3413;MQ=42.26;MQ0=44;MQRankSum=-3.195;QD=26.20;ReadPosRankSum=3.115;VQSLOD=3.5794;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:27:8.35:8,0,497	0/1:6,0:6:19.29:122,0,19	0/0:30,0:5:7.34:0,7,58	0/0:57,0:10:13.78:0,14,161	1/1:14,4:18:5.38:712,5,0	0/0:16,0:15:24.94:0,25,1194	0/0:22,0:22:36.05:0,36,1134	1/1:18,0:17:29.17:350,29,0	1/1:17,3:20:44.94:1192,45,0	1/1:18,1:19:44.80:994,45,0	1/1:5,0:5:11.95:150,12,0	1/1:14,1:14:15.48:330,15,0	1/1:0,4:4:3.01:170,3,0	1/1:10,1:11:20.95:516,21,0	1/1:13,0:13:6.80:215,7,0	1/1:8,2:10:19.62:637,20,0	0/1:16,0:14:27.84:211,0,28	1/1:6,1:7:18.06:476,18,0	0/1:26,0:21:41.54:42,0,193	1/1:15,0:15:3.01:38,3,0	0/1:16,0:12:0.04:0,0,0	1/1:9,3:12:21:713,21,0	1/1:17,0:14:0.19:205,0,0	1/1:11,1:11:2.81:179,3,0	0/1:20,0:20:99:115,0,274	1/1:11,1:12:19.99:531,20,0	1/1:7,0:6:9:249,9,0	1/1:8,3:10:27.07:860,27,0
chr10	13190451	.	TCG	T	2323.92	PASS	AB=1.000;AC=49;AF=0.907;AN=54;BaseQRankSum=3.747;DP=441;FS=3.805;HRun=0;HaplotypeScore=141.0537;InbreedingCoeff=0.1810;MQ=57.97;MQ0=34;MQRankSum=-1.609;QD=5.68;ReadPosRankSum=1.773;VQSLOD=2.6744;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:30,1:26:50.15:355,50,0	1/1:5,0:5:5.09:32,5,0	0/1:38,0:18:10.26:10,0,105	0/1:57,0:16:7.36:7,0,67	1/1:19,1:20:18.84:137,19,0	0/1:17,0:16:9.20:9,0,98	0/0:17,0:17:14.55:0,15,184	1/1:16,0:14:26.78:195,27,0	1/1:19,2:21:21.97:129,22,0	1/1:18,0:17:31.35:241,31,0	1/1:5,0:5:2.95:25,3,0	1/1:9,0:8:4.24:36,4,0	1/1:4,0:4:2.88:15,3,0	1/1:9,0:9:10.48:78,10,0	1/1:12,0:12:1.38:22,1,0	1/1:8,0:8:6.24:39,6,0	1/1:15,0:13:12.30:74,12,0	1/1:5,0:5:14.76:104,15,0	1/1:28,0:24:54.68:348,55,0	1/1:11,1:12:2.96:19,3,0	./.	1/1:10,0:10:13.59:89,14,0	1/1:14,0:13:14.20:95,14,0	1/1:9,0:8:2.87:15,3,0	1/1:13,0:12:15.62:101,16,0	1/1:12,0:12:6.82:104,7,0	1/1:10,0:9:2.06:25,2,0	1/1:11,0:11:25.36:145,25,0
chr10	13190455	.	TCTCG	T	2374.78	PASS	AB=0.944;AC=42;AF=0.750;AN=56;BaseQRankSum=4.474;DP=430;FS=1.316;HRun=0;HaplotypeScore=147.6799;InbreedingCoeff=0.3966;MQ=59.66;MQ0=30;MQRankSum=-3.029;QD=8.22;ReadPosRankSum=2.246;VQSLOD=2.4301;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:25:31.82:32,0,94	1/1:5,0:5:2.34:28,2,0	0/0:40,0:20:23.65:0,24,559	0/0:60,0:17:0.18:0,0,269	1/1:17,0:17:17.14:172,17,0	0/0:15,0:14:15.05:0,15,350	0/0:16,0:16:26.64:0,27,443	0/1:13,0:11:8.47:155,0,8	1/1:18,0:18:15.79:136,16,0	1/1:16,0:15:22.36:230,22,0	1/1:5,0:5:3:25,3,0	1/1:9,0:8:6:56,6,0	1/1:4,0:4:3.01:39,3,0	1/1:8,0:8:6.02:75,6,0	0/0:10,0:10:0.47:0,0,1	1/1:8,0:8:9.02:98,9,0	1/1:15,0:13:11.33:71,11,0	1/1:6,0:6:12.38:92,12,0	1/1:11,18:27:63.31:601,63,0	1/1:8,3:11:6.02:91,6,0	0/1:10,4:11:0:0,0,0	1/1:10,0:10:14.95:145,15,0	1/1:13,0:12:10.52:78,11,0	1/1:9,0:8:2.71:33,3,0	0/1:12,0:11:15.08:16,0,15	1/1:13,0:13:11.35:107,11,0	1/1:13,0:12:6.92:60,7,0	1/1:11,0:11:25.64:191,26,0
chr10	13190496	.	TTTCTTTTC	T	7820.90	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=3.999;DP=492;FS=20.542;HRun=0;HaplotypeScore=157.8495;InbreedingCoeff=0.9122;MQ=56.94;MQ0=7;MQRankSum=-6.398;QD=28.34;ReadPosRankSum=-0.334;VQSLOD=3.2320;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:28:52.11:0,52,1386	1/1:9,0:9:8.97:147,9,0	0/0:52,0:20:22.78:0,23,774	0/0:54,0:19:24.70:0,25,427	1/1:21,0:21:56.06:686,56,0	0/0:18,0:18:39.05:0,39,1118	0/0:16,0:16:30.09:0,30,759	1/1:19,1:18:24.67:455,25,0	1/1:18,2:20:27.06:473,27,0	1/1:15,1:16:48.13:835,48,0	1/1:9,1:10:29.97:459,30,0	1/1:15,1:16:24.52:401,25,0	1/1:6,1:7:11.93:182,12,0	1/1:7,0:7:17.78:233,18,0	1/1:15,0:15:18.06:308,18,0	1/1:8,0:8:15.05:246,15,0	1/1:14,0:14:17.55:273,18,0	1/1:12,0:12:6.02:106,6,0	0/0:13,0:13:33.11:0,33,1140	0/0:12,0:12:32.99:0,33,1160	0/0:8,0:8:24.01:0,24,688	1/1:21,1:22:45.15:762,45,0	1/1:13,0:13:36.55:550,37,0	1/1:12,0:12:7.38:100,7,0	0/0:13,0:13:1.12:0,1,405	1/1:18,1:19:39.05:655,39,0	1/1:21,0:21:39.11:593,39,0	1/1:13,1:14:19.66:359,20,0
chr10	13190497	.	TTCTTTTC	T	11080.64	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=0.751;DP=486;FS=14.818;HRun=0;HaplotypeScore=137.3427;InbreedingCoeff=0.9431;MQ=57.22;MQ0=7;MQRankSum=-6.271;QD=40.74;ReadPosRankSum=-0.297;VQSLOD=3.8040;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:28:11.52:0,12,1080	1/1:1,8:9:8.99:203,9,0	0/0:52,0:20:25.47:0,25,715	0/0:53,0:19:21.77:0,22,431	1/1:11,10:21:56.27:955,56,0	0/0:18,0:18:39.05:0,39,986	0/0:16,0:16:30.08:0,30,644	1/1:5,15:18:40.75:628,41,0	1/1:7,13:20:27.06:585,27,0	1/1:5,11:16:48.16:1166,48,0	1/1:2,8:10:30.10:679,30,0	1/1:5,11:16:27.02:564,27,0	1/1:2,5:7:12.04:215,12,0	1/1:3,4:7:17.80:331,18,0	1/1:2,13:15:18.06:474,18,0	1/1:1,6:7:15.05:358,15,0	1/1:3,10:13:18.06:439,18,0	1/1:1,11:12:6.02:161,6,0	0/0:12,0:12:33.11:0,33,1018	0/0:12,0:12:32.99:0,33,1049	0/0:8,0:8:24.01:0,24,630	1/1:4,18:22:45.15:1075,45,0	1/1:6,7:13:37.94:778,38,0	1/1:2,9:11:7.91:168,8,0	0/0:13,0:13:16.29:0,16,362	1/1:4,15:19:39.07:885,39,0	1/1:8,12:21:42.01:885,42,0	1/1:9,4:13:21.53:533,22,0
chr10	13190498	.	TCTTTTC	T	9130.89	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=2.848;DP=484;FS=22.070;HRun=0;HaplotypeScore=134.0241;InbreedingCoeff=0.9459;MQ=57.36;MQ0=7;MQRankSum=-4.805;QD=34.20;ReadPosRankSum=-1.069;VQSLOD=2.9975;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:29:33.39:0,33,1082	1/1:9,0:9:8.95:164,9,0	0/0:52,0:21:16.31:0,16,665	0/0:51,0:18:16.77:0,17,383	1/1:21,0:21:56.25:781,56,0	0/0:19,0:19:39.04:0,39,849	0/0:16,0:16:22.20:0,22,520	1/1:19,0:17:44.85:565,45,0	1/1:16,1:19:27.06:503,27,0	1/1:15,1:16:48.16:914,48,0	1/1:9,1:10:30.09:520,30,0	1/1:13,2:15:27.01:443,27,0	1/1:7,0:7:12.01:155,12,0	1/1:6,0:7:17.80:288,18,0	1/1:13,1:15:18.06:359,18,0	1/1:7,0:7:15.05:281,15,0	1/1:11,1:13:17.98:324,18,0	1/1:11,0:11:6.02:123,6,0	0/0:13,0:13:29.12:0,29,885	0/0:12,0:12:32.99:0,33,948	0/0:8,0:8:23.96:0,24,564	1/1:20,1:21:45.15:838,45,0	1/1:14,0:14:42.05:693,42,0	1/1:10,1:11:7.90:157,8,0	0/0:13,0:13:17.41:0,17,312	1/1:17,0:18:39.07:707,39,0	1/1:16,3:21:45.11:872,45,0	1/1:12,0:13:26.28:443,26,0
chr10	13190502	.	TTC	T	3886.22	PASS	AB=1.000;AC=38;AF=0.679;AN=56;BaseQRankSum=6.592;DP=480;FS=10.148;HRun=0;HaplotypeScore=125.7216;InbreedingCoeff=0.8015;MQ=53.25;MQ0=7;MQRankSum=-5.519;QD=13.59;ReadPosRankSum=-1.437;VQSLOD=2.4069;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:16.64:0,17,418	1/1:9,0:9:8.91:63,9,0	0/0:50,0:19:18.31:0,18,334	0/0:47,0:15:6.25:0,6,182	1/1:20,2:22:50.57:435,51,0	0/0:18,0:18:35.95:0,36,353	0/0:15,0:15:26.96:0,27,278	1/1:18,1:17:34.57:264,35,0	1/1:20,0:20:23.30:173,23,0	1/1:15,1:16:23.97:303,24,0	1/1:10,0:10:29.39:275,29,0	1/1:14,0:14:23.51:177,24,0	0/1:7,0:7:12.35:80,0,12	1/1:6,0:6:14.93:118,15,0	1/1:15,0:15:17.88:145,18,0	1/1:7,0:7:14.87:103,15,0	1/1:12,1:13:17.91:143,18,0	1/1:11,0:11:5.95:41,6,0	0/0:14,0:14:38.80:0,39,472	0/0:12,0:12:30.06:0,30,454	0/0:8,0:8:20.98:0,21,286	1/1:21,0:21:44.18:337,44,0	1/1:17,0:17:50.66:391,51,0	1/1:11,0:11:8.56:104,9,0	0/1:13,0:13:4.23:4,0,121	1/1:18,0:18:32.71:232,33,0	1/1:21,0:21:41.62:306,42,0	1/1:14,2:16:27.27:191,27,0
chr10	13190503	.	TC	T	2607.01	PASS	AB=0.990;AC=38;AF=0.679;AN=56;BaseQRankSum=6.933;DP=478;FS=12.624;HRun=1;HaplotypeScore=122.9069;InbreedingCoeff=0.7530;MQ=53.57;MQ0=7;MQRankSum=-6.055;QD=8.12;ReadPosRankSum=-1.385;VQSLOD=-0.3985;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:50.83:0,51,321	1/1:9,0:9:8.45:45,8,0	0/1:48,1:19:9.84:10,0,270	0/0:41,3:14:4.83:0,5,162	1/1:22,0:22:49.65:337,50,0	0/0:19,0:19:34.67:0,35,242	0/0:15,0:15:24.64:0,25,181	1/1:19,0:17:34.99:230,35,0	1/1:17,2:19:20.83:117,21,0	1/1:16,0:16:30.93:195,31,0	1/1:10,0:10:26.72:163,27,0	1/1:14,0:14:21.18:110,21,0	0/1:7,0:7:5.45:39,0,5	1/1:5,1:6:14.41:87,14,0	1/1:14,1:15:17.02:92,17,0	1/1:7,0:7:14.17:76,14,0	1/1:12,1:13:16.88:83,17,0	1/1:11,0:11:5.49:24,5,0	0/0:15,0:15:28.37:0,28,359	0/0:13,0:13:30:0,30,355	0/0:8,0:8:20.89:0,21,220	1/1:21,0:21:40.08:206,40,0	1/1:18,0:18:48.92:317,49,0	1/1:10,0:10:8.65:64,9,0	0/0:13,0:13:0.82:0,1,76	1/1:17,1:18:30.47:148,30,0	1/1:19,2:21:43.38:279,43,0	1/1:16,0:16:27.28:185,27,0
chr10	13191236	.	CGTGTGTGTGTGTGTGTGTGT	C	438.21	PASS	AB=1.000;AC=9;AF=0.167;AN=54;BaseQRankSum=3.871;DP=570;FS=0.000;HRun=0;HaplotypeScore=264.4574;InbreedingCoeff=0.3355;MQ=52.38;MQ0=17;MQRankSum=-1.384;QD=3.32;ReadPosRankSum=-1.240;VQSLOD=2.1037;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:23:24.08:0,24,804	0/1:12,0:12:27.43:27,0,377	0/0:21,0:15:5.85:0,6,124	0/0:24,0:22:18.05:0,18,358	./.	0/0:13,0:10:8.01:0,8,188	0/0:22,0:20:24.08:0,24,652	0/0:23,0:21:27.08:0,27,661	0/0:14,0:13:12.04:0,12,361	0/0:37,0:32:51.17:0,51,1528	1/1:14,0:14:0.27:1,0,0	0/0:22,0:19:14.87:0,15,499	0/0:17,0:16:16.30:0,16,468	0/0:16,0:15:9.03:0,9,249	0/0:19,0:18:12.04:0,12,354	0/0:11,0:10:8.55:0,9,215	0/0:22,0:20:18.95:0,19,524	0/1:16,0:15:50.72:51,0,638	1/1:16,5:19:18.06:357,18,0	0/1:17,0:16:7.54:8,0,23	1/1:52,0:49:6.66:123,7,0	0/0:18,0:17:6.01:0,6,103	0/0:28,0:25:3.38:0,3,25	0/0:19,0:17:3.01:0,3,77	0/0:21,0:19:8.74:0,9,289	0/0:28,0:28:44.94:0,45,1361	0/0:15,0:15:21.35:0,21,422	0/0:4,0:4:9.03:0,9,275
chr10	13191280	.	TG	T	1381.01	PASS	AB=0.843;AC=24;AF=0.462;AN=52;BaseQRankSum=6.441;DP=611;FS=0.761;HRun=2;HaplotypeScore=148.3783;InbreedingCoeff=-0.0507;MQ=30.07;MQ0=127;MQRankSum=-5.878;QD=4.12;ReadPosRankSum=-0.789;VQSLOD=0.0309;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,1:26:34.57:0,35,386	1/1:3,3:4:2.04:6,2,0	./.	0/0:37,0:2:3.01:0,3,33	0/0:7,13:19:0.94:0,1,3	0/1:19,1:15:18.50:19,0,125	0/1:25,1:20:42.62:43,0,194	0/1:28,2:15:21.93:22,0,223	./.	0/1:26,6:21:31.63:279,0,32	0/1:7,5:11:0.01:0,0,0	1/1:12,3:9:2.36:24,2,0	0/0:14,3:10:1.49:0,1,4	0/1:12,8:11:4.33:13,0,4	1/1:7,6:9:8.78:115,9,0	1/1:10,1:8:0.01:14,0,0	0/1:12,5:11:22.54:83,0,23	1/1:9,2:9:26.24:280,26,0	0/0:31,1:21:14.61:0,15,451	0/1:21,6:23:53.06:53,0,140	0/0:58,0:47:27.02:0,27,373	0/0:19,2:17:2.13:0,2,39	0/0:17,1:13:0.33:0,0,1	0/1:19,1:12:0.07:0,0,0	0/1:21,9:23:88.11:88,0,133	0/1:24,5:17:99:294,0,125	0/1:8,2:9:59.27:110,0,59	1/1:3,2:2:6.02:77,6,0
chr10	13191281	.	G	GT	1539.59	PASS	AB=0.884;AC=24;AF=0.462;AN=52;BaseQRankSum=5.793;DP=612;FS=0.000;HRun=1;HaplotypeScore=153.7322;InbreedingCoeff=-0.0765;MQ=30.06;MQ0=129;MQRankSum=-5.293;QD=4.16;ReadPosRankSum=-0.061;VQSLOD=-0.0626;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:27:36.05:0,36,430	0/0:4,2:4:2.02:0,2,6	./.	0/0:39,0:2:3.01:0,3,33	0/1:17,2:19:0.60:1,0,1	0/1:17,2:14:21.43:21,0,125	0/1:26,2:22:60.29:60,0,196	0/1:28,0:15:22.21:22,0,250	./.	0/1:28,3:21:20.23:301,0,20	0/1:12,1:11:0.01:0,0,0	1/1:14,2:10:5.37:57,5,0	0/0:16,1:10:1.54:0,2,5	1/1:19,1:11:0.23:17,0,0	1/1:12,0:8:7.98:84,8,0	0/1:10,1:8:10.55:13,0,11	0/1:14,3:11:22.89:89,0,23	1/1:6,5:9:27:322,27,0	0/0:32,0:21:17.35:0,17,480	0/1:24,3:23:47.95:48,0,145	0/0:54,0:43:29.48:0,29,380	0/1:16,2:17:3.51:4,0,34	0/0:15,2:13:2.10:0,2,5	0/1:17,2:11:0.07:0,0,0	0/1:30,1:24:99:104,0,137	0/1:23,4:16:86.21:355,0,86	0/1:6,2:9:59.64:107,0,60	1/1:5,0:2:6.02:77,6,0
chr10	13191286	.	GGTGTGTGTGGT	G	2360.85	PASS	AB=0.969;AC=22;AF=0.407;AN=54;BaseQRankSum=0.849;DP=621;FS=38.476;HRun=0;HaplotypeScore=191.8961;InbreedingCoeff=0.0029;MQ=31.60;MQ0=137;MQRankSum=-4.101;QD=9.33;ReadPosRankSum=0.947;VQSLOD=1.4375;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:29:66.19:0,66,2081	1/1:5,0:3:1.90:34,2,0	./.	0/0:49,0:6:9.45:0,9,128	0/0:18,0:18:2.50:0,2,6	0/0:18,0:14:23.94:0,24,708	0/0:27,0:22:30.44:0,30,1109	0/1:26,0:12:99:128,0,144	1/1:7,0:4:8.99:170,9,0	0/1:27,0:17:99:487,0,260	1/1:9,3:11:2.90:54,3,0	0/1:13,0:8:30.77:77,0,31	0/1:16,0:9:59.19:59,0,83	0/1:22,0:12:40.76:151,0,41	0/0:10,0:6:2.98:0,3,21	0/1:10,0:7:81.54:169,0,82	0/1:16,0:10:8.53:100,0,9	1/1:9,0:9:5.82:356,6,0	0/0:33,0:19:2.10:0,2,937	0/0:30,0:25:14.99:0,15,492	0/0:53,0:43:48.63:0,49,1651	0/1:13,6:16:48.58:67,0,49	0/0:10,5:12:6.39:0,6,50	1/1:18,0:12:2.11:99,2,0	0/0:35,0:26:19.75:0,20,732	0/1:31,0:18:99:420,0,212	0/1:10,0:9:48.67:71,0,49	1/1:5,0:2:3.01:78,3,0
chr10	13191291	.	GTGTGGT	G	1982.29	PASS	AB=0.839;AC=21;AF=0.389;AN=54;BaseQRankSum=3.188;DP=647;FS=49.864;HRun=0;HaplotypeScore=178.1365;InbreedingCoeff=0.0262;MQ=33.42;MQ0=136;MQRankSum=-4.119;QD=8.09;ReadPosRankSum=-0.227;VQSLOD=1.3792;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:32:72.14:0,72,2104	1/1:5,0:3:2.23:18,2,0	./.	0/0:62,0:8:13.97:0,14,143	0/0:15,3:17:1.72:0,2,4	0/0:17,0:13:24.10:0,24,633	0/0:27,0:23:35.99:0,36,1114	0/1:26,1:12:99:151,0,209	1/1:6,2:5:11.09:138,11,0	0/1:21,6:16:99:379,0,243	0/1:11,3:12:34.86:49,0,35	0/1:9,4:8:18.94:19,0,28	0/1:12,4:9:1.99:24,0,2	0/1:13,9:12:29.90:115,0,30	0/0:8,0:4:3:0,3,28	0/1:9,2:8:89.04:121,0,89	0/1:13,2:9:34.79:174,0,35	1/1:8,1:8:14.70:309,15,0	0/0:35,0:21:47.52:0,48,1295	0/0:33,0:28:24.76:0,25,702	0/0:62,0:51:63.05:0,63,1736	0/1:16,2:15:65.12:65,0,86	0/0:15,0:12:4.62:0,5,35	1/1:14,2:9:4.83:67,5,0	0/0:36,0:28:21.43:0,21,681	0/1:26,4:17:99:339,0,239	0/1:8,1:9:99:102,0,114	1/1:3,1:1:3.01:77,3,0
chr10	13191297	.	T	TGTG	1671.54	PASS	AB=0.965;AC=22;AF=0.393;AN=56;BaseQRankSum=2.252;DP=684;FS=25.586;HRun=0;HaplotypeScore=189.9865;InbreedingCoeff=0.0667;MQ=35.06;MQ0=133;MQRankSum=-5.697;QD=6.28;ReadPosRankSum=-2.858;VQSLOD=1.2687;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:31:41.50:0,41,1168	0/0:5,0:3:3.83:0,4,20	0/0:63,0:1:0:0,0,0	0/0:73,0:9:14.26:0,14,141	1/1:21,0:20:1.51:4,2,0	0/0:18,0:16:23.92:0,24,356	0/0:28,0:24:42:0,42,655	0/1:26,2:14:81.94:258,0,82	1/1:7,1:6:9.93:146,10,0	0/1:29,0:19:99:176,0,209	0/1:13,0:12:32.29:48,0,32	0/1:10,3:9:30.32:62,0,30	0/0:15,0:8:7.50:0,8,43	0/1:23,0:13:36.65:39,0,37	1/1:10,0:6:4.66:21,5,0	0/1:13,0:10:88.01:102,0,88	0/1:16,0:11:7.64:154,0,8	1/1:4,6:9:17.63:304,18,0	0/0:32,0:18:50.89:0,51,751	0/0:30,0:25:7.81:0,8,362	0/0:69,0:58:63.94:0,64,1042	0/1:21,0:18:39.35:67,0,39	0/0:14,0:11:4.09:0,4,39	1/1:10,8:13:2.08:68,2,0	0/0:36,0:29:42.40:0,42,510	0/1:27,3:18:99:315,0,239	0/1:7,0:6:30.91:31,0,64	1/1:4,0:2:3.01:44,3,0
chr10	13191310	.	TG	T	686.50	PASS	AB=0.845;AC=16;AF=0.286;AN=56;BaseQRankSum=11.198;DP=688;FS=100.958;HRun=2;HaplotypeScore=196.5005;InbreedingCoeff=-0.1751;MQ=38.34;MQ0=88;MQRankSum=-6.762;QD=3.32;ReadPosRankSum=-0.342;VQSLOD=-0.3056;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:29:69.24:0,69,924	1/1:2,2:4:7.92:42,8,0	0/0:85,2:3:5.92:0,6,46	0/0:92,0:15:29.60:0,30,358	0/0:7,14:21:3.75:0,4,47	0/0:17,2:18:17.78:0,18,324	0/0:22,2:23:51.64:0,52,760	0/0:17,3:13:25.90:0,26,359	0/1:7,2:8:17.55:18,0,188	0/1:20,8:22:99:260,0,202	0/1:10,4:13:4.40:4,0,35	0/1:14,2:13:33.85:34,0,61	0/1:8,3:9:32.90:52,0,33	0/1:16,3:13:44.83:45,0,78	0/0:1,2:3:3.40:0,3,47	0/1:10,1:10:30.57:31,0,203	0/1:8,1:7:58.47:58,0,88	0/0:10,0:10:20.21:0,20,233	0/0:28,1:22:10.06:0,10,786	0/0:19,2:25:17.35:0,17,311	0/0:72,1:64:89.60:0,90,1221	0/0:18,6:23:4.11:0,4,117	1/1:8,5:11:0.62:32,1,0	0/0:16,2:12:2.10:0,2,43	0/1:24,8:29:67.15:67,0,356	0/1:21,5:22:99:107,0,347	0/1:7,3:9:54.38:84,0,54	0/1:5,0:3:4.08:4,0,56
chr10	13191311	.	G	GT	663.35	PASS	AB=0.970;AC=18;AF=0.321;AN=56;BaseQRankSum=11.630;DP=713;FS=115.409;HRun=1;HaplotypeScore=227.0285;InbreedingCoeff=-0.3378;MQ=38.07;MQ0=83;MQRankSum=-7.174;QD=2.35;ReadPosRankSum=-2.694;VQSLOD=-0.3621;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:30:60.97:0,61,853	1/1:4,1:5:0.39:28,0,0	0/0:91,0:3:5.96:0,6,47	0/0:93,0:15:30.19:0,30,314	0/0:22,0:22:0.66:0,1,39	0/0:18,1:18:25.02:0,25,314	0/0:25,0:24:48.22:0,48,706	0/0:20,0:13:26.92:0,27,343	0/1:11,0:10:7.70:8,0,177	0/1:28,1:25:99:226,0,219	0/1:14,1:14:12.19:12,0,34	0/1:14,0:13:31.54:32,0,56	0/1:11,0:9:30.90:38,0,31	0/1:21,0:14:34.85:35,0,91	0/1:6,0:5:1.98:2,0,38	0/1:11,0:10:8.82:9,0,203	0/1:9,1:8:46.18:46,0,81	0/0:10,0:10:20.96:0,21,245	0/1:28,0:24:6.18:6,0,727	0/0:25,1:25:16.68:0,17,286	0/0:73,0:65:89.12:0,89,1145	0/1:26,0:25:1.57:2,0,126	0/1:15,0:13:7.36:17,0,7	0/0:17,0:12:2.05:0,2,40	0/1:32,0:30:99:103,0,328	0/1:28,0:24:99:136,0,363	0/1:12,0:11:60.29:97,0,60	0/1:4,0:3:14.08:14,0,58
chr10	13191343	.	TG	T	405.63	PASS	AB=0.873;AC=13;AF=0.232;AN=56;BaseQRankSum=10.557;DP=765;FS=101.126;HRun=2;HaplotypeScore=229.0411;InbreedingCoeff=-0.3256;MQ=44.23;MQ0=57;MQRankSum=-6.700;QD=1.94;ReadPosRankSum=2.138;VQSLOD=-0.1745;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,3:25:51.76:0,52,623	0/1:5,3:10:43.04:43,0,56	0/0:101,0:12:14.14:0,14,161	0/0:116,1:19:32.55:0,33,379	0/0:14,8:25:5.63:0,6,52	0/0:19,0:15:4.84:0,5,277	0/0:25,0:24:4.64:0,5,525	0/0:21,2:19:39.10:0,39,555	0/1:12,1:13:6.32:6,0,236	0/1:28,4:32:99:168,0,593	0/0:8,3:13:3.24:0,3,21	0/1:11,2:13:44.56:45,0,162	0/1:9,1:9:48.77:49,0,92	0/1:18,2:19:5.14:5,0,256	0/1:9,0:8:29.56:30,0,77	0/1:11,1:12:39.39:39,0,260	0/1:8,1:10:37.43:37,0,159	0/0:12,0:11:24.08:0,24,353	0/0:24,0:17:22.44:0,22,566	0/0:26,1:27:8.01:0,8,379	0/0:63,1:57:81.41:0,81,1204	0/1:25,4:31:3.61:4,0,199	0/0:22,3:26:2.27:0,2,58	0/0:16,2:16:2.84:0,3,45	0/0:26,6:29:10.83:0,11,383	0/1:23,2:23:29.16:29,0,604	0/1:8,0:9:27.61:88,0,28	0/1:3,0:3:0.07:0,0,82
chr10	13191344	.	G	GT	613.31	PASS	AB=0.881;AC=12;AF=0.214;AN=56;BaseQRankSum=11.361;DP=757;FS=102.332;HRun=1;HaplotypeScore=234.1947;InbreedingCoeff=-0.3373;MQ=43.48;MQ0=55;MQRankSum=-7.548;QD=3.23;ReadPosRankSum=1.652;VQSLOD=0.0957;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:25:42.37:0,42,569	0/1:9,1:11:37.12:37,0,51	0/0:97,1:12:19.04:0,19,184	0/0:114,0:18:18.39:0,18,365	0/0:21,3:23:1.48:0,1,40	0/0:15,3:15:3.82:0,4,262	0/0:22,2:24:11.91:0,12,502	0/0:23,0:19:39.09:0,39,522	0/1:11,1:13:30.41:30,0,220	0/1:35,3:33:99:216,0,526	0/0:11,1:13:3.64:0,4,21	0/1:12,1:13:61.36:61,0,149	0/1:8,0:9:57.75:58,0,85	0/0:20,1:19:1.39:0,1,251	0/1:6,4:8:21.37:21,0,72	0/1:11,0:12:43.22:43,0,245	0/1:11,0:11:68.74:69,0,147	0/0:12,0:11:24.08:0,24,334	0/0:22,0:16:12.77:0,13,510	0/0:22,2:26:6.89:0,7,355	0/0:63,1:57:81.64:0,82,1127	0/1:28,2:32:32.13:32,0,195	0/0:21,4:26:13.49:0,13,72	0/0:16,0:16:2.86:0,3,42	0/0:29,0:29:14.47:0,14,361	0/1:25,1:23:61.74:62,0,553	0/1:6,2:8:28.90:98,0,29	0/1:3,0:3:31.25:31,0,73
chr10	13191348	.	TG	T	543.64	PASS	AB=0.890;AC=13;AF=0.232;AN=56;BaseQRankSum=11.380;DP=737;FS=112.227;HRun=2;HaplotypeScore=219.2661;InbreedingCoeff=-0.3481;MQ=42.75;MQ0=56;MQRankSum=-6.048;QD=2.36;ReadPosRankSum=3.770;VQSLOD=0.2073;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,3:23:44.62:0,45,565	0/1:7,4:11:73.19:73,0,74	0/0:94,0:12:21.59:0,22,271	0/0:110,0:19:41.97:0,42,489	0/0:18,5:22:5.15:0,5,51	0/0:18,0:15:18.27:0,18,244	0/1:21,2:22:3.87:4,0,418	0/0:20,1:17:39.13:0,39,574	0/0:11,3:13:7.98:0,8,278	0/1:32,5:32:99:226,0,554	0/0:9,2:11:3.40:0,3,33	0/1:12,1:13:9.91:10,0,165	0/1:7,3:9:30.82:31,0,109	0/0:20,1:17:3.61:0,4,332	0/1:10,0:8:30.89:31,0,79	0/1:10,0:12:12.06:12,0,305	0/1:10,1:11:30.37:30,0,161	0/0:12,0:11:24.08:0,24,358	0/0:21,1:15:3.32:0,3,540	0/0:19,6:25:4.02:0,4,310	0/0:64,1:58:87.26:0,87,1231	0/1:23,7:30:29.76:30,0,168	0/0:21,7:26:8.34:0,8,79	0/0:15,1:15:3.38:0,3,85	0/1:24,8:29:60.38:60,0,400	0/1:25,3:24:92.30:92,0,554	0/1:8,1:8:29.74:80,0,30	0/1:3,0:3:7.72:8,0,81
chr10	13191349	.	G	GT	1131.78	PASS	AB=0.873;AC=15;AF=0.268;AN=56;BaseQRankSum=11.143;DP=735;FS=109.894;HRun=1;HaplotypeScore=224.2485;InbreedingCoeff=-0.3924;MQ=42.77;MQ0=55;MQRankSum=-7.467;QD=4.09;ReadPosRankSum=2.620;VQSLOD=0.4299;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,2:23:19.30:0,19,505	0/1:9,2:11:69.24:82,0,69	0/0:90,0:12:24.37:0,24,285	0/0:106,0:18:41.84:0,42,474	0/0:18,4:22:2.96:0,3,43	0/0:15,3:14:14.85:0,15,208	0/0:22,1:22:1.17:0,1,388	0/1:23,1:20:46.54:47,0,492	0/0:12,2:13:11.30:0,11,263	0/1:31,5:32:99:383,0,524	0/0:8,4:12:7.01:0,7,61	0/1:11,2:13:28.53:29,0,152	0/1:9,1:9:18.51:19,0,108	0/1:19,2:17:0.14:0,0,313	0/1:6,4:8:25.43:25,0,74	0/1:12,0:12:15.88:16,0,285	0/1:10,1:11:67.55:68,0,147	0/0:13,0:12:24.08:0,24,332	0/0:22,0:15:36.71:0,37,539	0/1:20,2:25:26.19:26,0,287	0/0:67,0:59:79.73:0,80,1126	0/1:27,2:30:77.58:78,0,161	0/0:21,6:26:14.78:0,15,86	0/0:16,0:14:5.07:0,5,80	0/1:27,3:27:99:209,0,370	0/1:27,3:26:99:174,0,533	0/1:7,2:8:30.10:95,0,30	0/1:2,1:3:31.80:32,0,73
chr10	13193419	.	G	GT	116.99	PASS	AB=0.938;AC=14;AF=0.269;AN=52;BaseQRankSum=3.869;DP=367;FS=4.557;HRun=0;HaplotypeScore=218.9383;InbreedingCoeff=0.1753;MQ=40.78;MQ0=4;MQRankSum=-2.973;QD=0.83;ReadPosRankSum=-0.176;VQSLOD=1.8381;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:27:13.94:14,0,154	./.	./.	0/0:8,0:3:3.77:0,4,32	0/1:26,0:26:0.41:0,0,11	0/0:14,0:14:2.87:0,3,42	0/0:9,0:9:5.45:0,5,37	0/1:9,1:7:72.54:73,0,124	0/0:22,0:22:2.47:0,2,78	0/0:24,0:24:64.85:0,65,742	0/0:14,0:15:6.97:0,7,65	0/0:17,0:17:20.45:0,20,202	0/0:16,0:16:19.29:0,19,238	0/0:18,0:18:4.34:0,4,119	0/0:6,0:6:3.42:0,3,43	0/0:8,0:8:2.91:0,3,41	1/1:6,0:6:8.47:50,8,0	0/0:5,0:6:15.05:0,15,202	0/1:8,2:8:32.58:33,0,129	0/1:12,1:13:1.14:29,0,1	0/0:1,1:2:0:0,0,0	1/1:23,0:22:0.12:24,0,0	0/0:16,1:17:0.96:0,1,8	1/1:6,0:6:2.03:6,2,0	0/1:16,1:17:3.42:3,0,22	0/0:22,0:21:53.87:0,54,728	0/0:7,0:7:15.05:0,15,197	1/1:2,0:2:2.70:14,3,0
chr10	13193442	.	GTCTCC	G	303.77	PASS	AB=0.986;AC=20;AF=0.357;AN=56;BaseQRankSum=7.599;DP=519;FS=32.545;HRun=0;HaplotypeScore=326.5233;InbreedingCoeff=-0.1015;MQ=52.79;MQ0=6;MQRankSum=-4.557;QD=0.96;ReadPosRankSum=-3.767;VQSLOD=0.4792;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:43.18:0,43,1295	0/1:6,0:6:3.12:3,0,98	0/0:18,0:5:1.37:0,1,99	0/1:25,0:12:16.55:17,0,63	1/1:28,0:27:13.68:75,14,0	0/0:17,0:17:22.83:0,23,534	0/0:20,0:20:16.13:0,16,379	0/1:17,0:15:16.10:16,0,564	0/0:26,0:26:28.97:0,29,1017	0/1:25,0:25:8.59:9,0,766	0/1:24,1:25:4.84:5,0,197	0/0:22,0:22:27.82:0,28,772	0/0:19,0:19:15.52:0,16,601	0/1:20,0:20:10.17:10,0,305	0/1:14,0:14:6.07:6,0,193	0/0:13,0:13:17.15:0,17,289	0/0:14,0:14:10.21:0,10,264	0/0:9,0:9:11.83:0,12,446	0/0:12,0:8:21:0,21,387	0/1:20,1:20:7.78:8,0,257	1/1:4,0:4:0.47:1,0,0	0/1:28,1:28:83.57:84,0,145	0/1:23,1:24:1.04:137,0,1	1/1:12,1:13:2.03:6,2,0	0/1:22,0:22:24.55:25,0,430	0/1:27,1:28:29.73:30,0,873	0/1:10,0:10:4.79:5,0,227	0/1:4,0:4:19.36:19,0,28
chr10	13193443	.	TCTCC	T	2363.16	PASS	AB=0.937;AC=28;AF=0.500;AN=56;BaseQRankSum=7.897;DP=502;FS=29.890;HRun=0;HaplotypeScore=314.6272;InbreedingCoeff=-0.6723;MQ=55.81;MQ0=6;MQRankSum=-4.960;QD=4.89;ReadPosRankSum=-2.916;VQSLOD=1.2124;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:31,2:33:25.58:26,0,945	0/0:5,1:6:1.63:0,2,61	0/1:19,0:6:18.32:18,0,77	0/1:26,0:13:38.36:38,0,49	1/1:20,1:25:19.62:117,20,0	0/1:17,0:17:99:242,0,326	0/1:19,0:19:31.67:32,0,284	0/1:13,0:14:62.56:63,0,432	0/1:25,1:26:99:149,0,703	0/1:19,3:23:99:250,0,524	0/1:22,1:24:44.66:45,0,120	0/1:21,1:22:20.90:21,0,534	0/1:18,1:19:99:168,0,433	0/1:20,0:20:37.24:37,0,216	0/1:14,0:14:49.39:49,0,136	0/1:13,0:13:92.85:93,0,161	0/1:14,0:14:99:131,0,157	0/1:8,1:9:10.43:10,0,329	0/0:9,0:6:17.82:0,18,185	0/1:19,0:19:69.12:69,0,111	0/0:4,0:4:0:0,0,1	0/1:22,1:25:68.44:68,0,98	1/1:17,3:22:1.40:129,1,0	1/1:13,0:13:0.45:1,0,0	0/1:21,0:23:99:129,0,242	0/1:26,0:27:99:454,0,656	0/1:8,0:9:99:110,0,155	0/1:2,1:4:21.96:61,0,22
chr10	13193446	.	CCG	C	1570.86	PASS	AB=0.961;AC=36;AF=0.643;AN=56;BaseQRankSum=7.400;DP=505;FS=30.694;HRun=0;HaplotypeScore=313.8178;InbreedingCoeff=-0.0683;MQ=55.63;MQ0=5;MQRankSum=-4.120;QD=3.44;ReadPosRankSum=-3.598;VQSLOD=1.0407;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:32,1:33:15.84:26,0,16	1/1:6,0:6:1.49:10,1,0	0/1:19,1:7:40.52:41,0,49	0/0:27,1:13:6.79:0,7,71	1/1:26,0:25:13.30:53,13,0	1/1:17,0:17:9.18:136,9,0	0/1:19,0:19:10.49:14,0,10	0/1:15,0:14:6.60:19,0,7	0/1:25,0:25:4.05:89,0,4	0/1:21,1:22:12.02:140,0,12	0/1:24,0:24:0.90:8,0,1	0/1:22,0:22:8.25:8,0,21	1/1:19,0:19:4.82:89,5,0	0/1:20,0:20:6.18:15,0,6	0/1:15,0:15:2.53:18,0,3	1/1:13,0:13:0.82:40,1,0	1/1:13,1:14:8.13:92,8,0	0/1:9,0:9:0.20:45,0,0	1/1:4,2:4:12:109,12,0	1/1:9,11:19:24.59:167,25,0	0/1:1,3:4:0:0,0,0	1/1:25,0:25:10.64:49,11,0	0/1:22,0:22:3.34:15,0,3	0/0:15,0:15:0.38:0,0,0	0/1:24,0:24:3.25:96,0,3	1/1:27,1:28:32.90:353,33,0	1/1:8,1:9:7.65:73,8,0	0/0:4,0:4:0.20:0,0,14
chr10	13193452	.	GC	G	9319.38	PASS	AB=0.897;AC=52;AF=0.929;AN=56;BaseQRankSum=-3.491;DP=516;FS=33.704;HRun=1;HaplotypeScore=296.9070;InbreedingCoeff=0.3202;MQ=58.46;MQ0=4;MQRankSum=-1.688;QD=18.24;ReadPosRankSum=6.451;VQSLOD=1.3878;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,33:34:70.79:865,71,0	1/1:0,6:6:11:108,11,0	0/1:17,3:10:8.35:8,0,174	0/1:30,3:15:3.28:3,0,137	1/1:0,21:25:16.45:98,16,0	1/1:0,17:17:42.14:557,42,0	1/1:0,20:20:38.99:486,39,0	1/1:2,13:14:23.26:494,23,0	1/1:1,23:24:53.59:659,54,0	1/1:0,20:20:53.17:660,53,0	1/1:1,22:25:16.09:191,16,0	1/1:1,20:21:40.93:492,41,0	1/1:0,19:19:53.83:648,54,0	1/1:0,21:21:29.62:277,30,0	1/1:0,16:16:24.72:257,25,0	1/1:0,13:13:26.95:322,27,0	1/1:0,14:14:27.01:323,27,0	1/1:0,9:9:19.58:278,20,0	1/1:0,3:3:8.99:88,9,0	1/1:0,21:21:24:232,24,0	0/0:0,4:5:0:0,0,0	1/1:1,22:26:26.18:170,26,0	1/1:3,19:23:14.53:97,15,0	1/1:1,14:16:2.99:25,3,0	1/1:1,23:23:40.21:488,40,0	1/1:0,27:28:84.11:1078,84,0	1/1:1,8:10:26.85:329,27,0	1/1:1,3:4:7.84:84,8,0
chr10	13193460	.	TTAGA	T	2145.81	PASS	AB=0.972;AC=28;AF=0.500;AN=56;BaseQRankSum=4.933;DP=601;FS=13.070;HRun=0;HaplotypeScore=369.0732;InbreedingCoeff=-0.6187;MQ=56.87;MQ0=7;MQRankSum=-7.102;QD=3.95;ReadPosRankSum=-5.012;VQSLOD=0.1187;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:39,0:39:99:182,0,370	0/0:8,0:8:10.76:0,11,81	0/0:30,0:14:16.03:0,16,451	0/1:48,0:20:46.96:47,0,324	1/1:25,0:26:0.10:66,0,0	0/1:17,0:17:48.70:49,0,124	0/1:27,0:28:99:162,0,243	0/0:20,0:18:10.74:0,11,257	0/1:22,0:22:20.95:21,0,265	0/1:29,1:30:99:198,0,299	0/1:23,2:25:43.85:44,0,69	0/1:23,0:23:91.56:92,0,208	0/1:21,0:21:88.04:88,0,157	0/1:20,0:20:86.26:86,0,101	0/1:16,0:16:62.79:107,0,63	0/1:14,0:14:59.66:74,0,60	0/1:15,2:17:76.09:122,0,76	0/1:10,1:11:13.02:13,0,125	0/1:5,0:5:5.98:6,0,14	1/1:21,0:21:3.72:165,4,0	1/1:6,0:6:4.49:42,4,0	0/1:26,2:29:8.46:293,0,8	0/1:24,1:26:27.45:129,0,27	0/1:14,3:17:8.49:25,0,8	0/1:29,0:28:99:165,0,128	0/1:35,1:36:39.72:40,0,292	0/1:11,0:11:14.43:14,0,89	0/1:4,0:4:16.32:71,0,16
chr10	13193461	.	TAG	T	1019.17	PASS	AB=0.947;AC=18;AF=0.321;AN=56;BaseQRankSum=8.117;DP=585;FS=28.926;HRun=0;HaplotypeScore=355.7756;InbreedingCoeff=-0.3814;MQ=57.42;MQ0=8;MQRankSum=-5.540;QD=2.63;ReadPosRankSum=0.254;VQSLOD=1.2028;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:66.91:0,67,636	0/1:5,2:8:15.36:15,0,44	0/0:29,0:14:18.79:0,19,315	0/1:50,0:20:24.47:24,0,228	1/1:25,2:26:6.36:70,6,0	0/1:16,0:16:96.87:97,0,181	0/0:28,0:28:38.91:0,39,481	0/0:19,0:17:22.94:0,23,331	0/1:18,0:18:40.82:41,0,303	0/1:27,0:28:81.13:81,0,305	0/1:24,0:24:9.97:10,0,102	0/0:21,1:22:4.16:0,4,267	0/1:20,0:20:85.84:86,0,193	0/1:18,0:18:6.54:7,0,171	0/0:17,0:17:3.20:0,3,161	0/1:14,0:14:44.11:44,0,102	0/1:16,0:16:45.44:45,0,132	0/0:10,0:11:23.30:0,23,204	0/0:5,0:5:11.47:0,11,75	0/1:13,6:19:52.61:53,0,57	0/0:6,0:6:5.59:0,6,36	0/1:26,2:29:88.75:93,0,89	0/1:25,0:26:29.98:30,0,33	0/0:16,0:16:5.05:0,5,43	0/1:27,2:28:99:115,0,216	0/1:34,0:34:99:277,0,295	0/1:9,1:10:87.39:87,0,125	0/0:4,0:4:3.91:0,4,49
chr10	13193482	.	TG	T	1469.55	PASS	AB=0.855;AC=20;AF=0.357;AN=56;BaseQRankSum=11.817;DP=775;FS=74.658;HRun=2;HaplotypeScore=379.6745;InbreedingCoeff=-0.5796;MQ=54.78;MQ0=19;MQRankSum=-7.128;QD=3.43;ReadPosRankSum=0.594;VQSLOD=0.0139;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:83.21:0,83,1442	0/1:7,1:8:99:126,0,111	0/0:87,0:28:34.80:0,35,787	0/0:92,0:30:53.53:0,54,673	0/1:22,10:32:68.58:133,0,69	0/1:12,4:16:99:105,0,406	0/0:28,3:31:1.35:0,1,924	0/0:24,0:23:55.04:0,55,794	0/1:22,3:24:42.18:42,0,545	0/1:20,6:27:99:154,0,644	0/1:16,8:28:45.23:45,0,210	0/1:25,1:26:14.83:15,0,754	0/1:18,2:20:48.26:48,0,432	0/1:17,1:18:28.88:29,0,487	0/1:11,5:16:99:101,0,361	0/1:9,4:13:99:131,0,248	0/0:18,1:20:4.37:0,4,536	0/0:12,0:13:30.51:0,31,368	0/1:19,2:21:27.06:27,0,533	0/1:21,1:23:87.96:125,0,88	0/1:15,0:15:9.72:10,0,122	0/1:33,5:42:99:179,0,549	0/1:16,5:24:86.80:92,0,87	0/1:17,2:22:31.48:31,0,288	0/0:29,2:30:31.42:0,31,864	0/1:25,5:33:99:173,0,596	0/1:13,1:14:40.95:41,0,369	0/1:4,0:4:19.38:19,0,78
chr10	13193493	.	GTC	G	384.42	PASS	AB=0.931;AC=15;AF=0.268;AN=56;BaseQRankSum=10.360;DP=783;FS=28.811;HRun=0;HaplotypeScore=363.7634;InbreedingCoeff=-0.1656;MQ=46.89;MQ0=34;MQRankSum=-6.265;QD=1.22;ReadPosRankSum=0.255;VQSLOD=1.1004;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:52,1:52:53.62:0,54,1356	0/1:6,1:7:37.61:43,0,38	0/0:91,0:22:49.48:0,49,643	0/0:99,0:26:39.20:0,39,575	0/1:26,0:25:23.28:23,0,84	0/1:17,0:17:2.51:3,0,77	0/1:31,1:29:30.07:30,0,180	0/0:23,0:22:55.81:0,56,426	0/0:25,0:25:27.62:0,28,478	0/1:30,1:28:65.86:66,0,415	0/1:24,4:28:45.14:45,0,100	0/0:24,0:24:39:0,39,548	0/1:16,0:16:9.23:9,0,449	0/0:18,0:18:26.34:0,26,376	0/0:15,0:15:10.75:0,11,172	0/0:13,0:13:22.05:0,22,212	0/0:21,0:20:28.23:0,28,309	0/0:15,0:15:26.82:0,27,410	0/1:19,0:19:11.32:11,0,198	0/1:20,4:24:24.38:24,0,25	0/1:18,0:16:0.78:1,0,66	0/1:32,4:36:93.44:93,0,210	1/1:18,4:22:7.24:30,7,0	0/0:24,0:24:24.01:0,24,467	0/0:27,2:28:12.97:0,13,582	0/1:29,6:32:99:144,0,426	0/0:16,0:16:18.22:0,18,391	0/1:3,1:4:13.03:13,0,14
chr10	13193501	.	GTGTC	G	2815.88	PASS	AB=0.951;AC=29;AF=0.518;AN=56;BaseQRankSum=3.312;DP=792;FS=57.895;HRun=0;HaplotypeScore=369.1956;InbreedingCoeff=-0.2065;MQ=43.69;MQ0=36;MQRankSum=-2.753;QD=5.20;ReadPosRankSum=1.070;VQSLOD=0.4279;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:54:86.46:0,86,1695	0/1:9,0:9:7.80:42,0,8	0/0:76,0:16:20.30:0,20,217	0/0:86,0:23:16.35:0,16,313	0/1:26,2:27:6.74:66,0,7	0/1:18,0:17:31.35:55,0,31	1/1:30,0:27:13.59:97,14,0	1/1:24,0:23:19.37:503,19,0	0/1:28,1:27:61.24:108,0,61	0/1:32,0:29:10.70:311,0,11	0/1:32,2:33:13.19:25,0,13	0/1:20,4:24:0.94:175,0,1	0/1:19,0:19:45.34:45,0,70	0/1:19,1:20:60.90:107,0,61	0/1:11,5:16:3.50:70,0,4	0/1:15,1:15:5.94:41,0,6	0/1:24,1:24:17.38:275,0,17	0/1:15,0:15:6.75:140,0,7	0/1:13,0:13:2.80:94,0,3	1/1:27,0:27:7.74:53,8,0	0/1:21,0:18:1.31:1,0,20	1/1:32,4:35:6.84:138,7,0	0/1:21,1:22:2.48:35,0,2	0/1:25,2:27:10.99:33,0,11	0/0:29,0:28:13.42:0,13,605	0/1:33,2:31:40.53:337,0,41	0/1:15,1:16:27.15:96,0,27	1/1:5,0:5:8.98:132,9,0
chr10	13193503	.	GTC	G	2228.24	PASS	AB=0.915;AC=31;AF=0.554;AN=56;BaseQRankSum=4.365;DP=779;FS=23.238;HRun=0;HaplotypeScore=351.0427;InbreedingCoeff=-0.3159;MQ=44.00;MQ0=36;MQRankSum=-6.230;QD=4.10;ReadPosRankSum=-2.875;VQSLOD=1.1615;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:54,1:54:69.09:0,69,1251	0/1:6,0:8:9.78:25,0,10	0/0:75,0:16:20.80:0,21,186	0/0:84,0:20:4.19:0,4,256	0/1:24,1:26:16.10:16,0,16	1/1:12,6:17:16.47:183,16,0	1/1:17,12:26:33.86:412,34,0	1/1:24,0:21:42.36:296,42,0	0/1:26,2:26:85.71:86,0,90	0/1:30,2:28:31.58:245,0,32	0/1:30,0:33:2.34:25,0,2	0/1:21,1:23:53.07:81,0,53	0/1:19,1:20:53.41:53,0,105	0/1:18,2:20:67.59:84,0,68	0/1:16,0:16:15.80:34,0,16	0/1:16,1:16:21.18:86,0,21	0/1:24,1:24:31.01:118,0,31	0/1:16,0:16:45:100,0,45	1/1:11,0:11:4.20:85,4,0	1/1:23,1:27:1.57:25,2,0	0/0:22,0:19:3.83:0,4,27	0/1:27,1:33:24.76:61,0,25	1/1:19,0:22:0.86:17,1,0	0/1:23,3:27:21.52:22,0,60	0/1:26,3:28:25.90:26,0,412	0/1:29,0:31:76.94:200,0,77	0/1:15,0:16:40.57:41,0,54	1/1:4,1:5:11.38:72,11,0
chr10	13194678	.	A	AGG	967.91	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=6.877;DP=450;FS=0.000;HRun=0;HaplotypeScore=80.1595;InbreedingCoeff=0.9899;MQ=92.23;MQ0=0;MQRankSum=-6.838;QD=33.38;ReadPosRankSum=0.129;VQSLOD=5.4702;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:90.19:0,90,1357	0/0:7,0:7:21.07:0,21,343	0/0:19,0:19:54.18:0,54,866	0/0:32,0:32:93.27:0,93,1440	0/0:20,0:20:48.16:0,48,781	0/0:10,0:10:30.10:0,30,488	0/0:20,0:20:54.14:0,54,851	0/0:20,0:20:60.20:0,60,976	0/0:16,0:16:48.16:0,48,780	0/0:18,0:18:54.18:0,54,882	0/0:10,0:10:30.06:0,30,465	0/0:10,0:10:24.08:0,24,392	0/0:13,0:13:27.09:0,27,441	0/0:16,0:16:48.16:0,48,780	0/0:9,0:9:27.02:0,27,364	0/0:15,0:15:42.10:0,42,655	0/0:12,0:12:35.99:0,36,500	0/0:24,0:24:60.20:0,60,978	1/1:0,8:11:31.49:468,31,0	1/1:0,9:10:25.57:397,26,0	1/1:0,7:8:15.02:243,15,0	0/0:19,0:19:57.19:0,57,919	0/0:19,0:19:51.07:0,51,829	0/0:19,0:19:54.18:0,54,881	0/0:19,0:19:39.13:0,39,625	0/0:16,0:16:48.15:0,48,788	0/0:16,0:16:42.06:0,42,616	0/0:9,0:9:27.09:0,27,438
chr10	13194685	.	G	GAAGGAAGGAA	4200.25	PASS	AB=0.850;AC=5;AF=0.089;AN=56;BaseQRankSum=8.996;DP=448;FS=3.178;HRun=0;HaplotypeScore=159.4485;InbreedingCoeff=0.8164;MQ=86.69;MQ0=0;MQRankSum=-9.318;QD=102.45;ReadPosRankSum=-0.427;VQSLOD=3.5558;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:66.11:0,66,1766	0/0:9,0:9:21.07:0,21,733	0/0:19,0:19:54.12:0,54,1299	0/0:28,0:28:80.44:0,80,1770	0/0:21,0:21:44.16:0,44,1325	0/0:9,0:9:27.08:0,27,860	0/0:21,0:21:51.12:0,51,1486	0/0:20,0:20:60.14:0,60,1757	0/0:14,0:14:41.96:0,42,1054	0/0:20,0:20:60.09:0,60,1454	0/0:9,0:9:24.07:0,24,796	0/0:10,0:10:24.05:0,24,678	0/0:13,0:13:25.87:0,26,654	0/0:16,0:16:45.10:0,45,1403	0/0:7,0:7:21.03:0,21,648	0/0:15,0:15:39.04:0,39,955	0/0:10,0:10:30.05:0,30,749	0/0:25,0:25:59.92:0,60,1766	0/1:14,3:17:6.64:1498,0,7	1/1:7,5:12:22.03:1422,22,0	1/1:11,1:12:23.15:1280,23,0	0/0:17,0:17:50.70:0,51,1284	0/0:19,0:19:53.84:0,54,1552	0/0:17,0:17:48.11:0,48,1353	0/0:22,0:22:39.09:0,39,1071	0/0:19,0:19:56.87:0,57,1689	0/0:14,0:14:36.10:0,36,1172	0/0:8,0:8:24.08:0,24,829
chr10	13194732	.	C	CTTCTTTTTT	5600.55	PASS	AB=0.957;AC=41;AF=0.820;AN=50;BaseQRankSum=3.881;DP=390;FS=8.678;HRun=0;HaplotypeScore=121.1448;InbreedingCoeff=0.0369;MQ=56.63;MQ0=21;MQRankSum=-3.443;QD=14.78;ReadPosRankSum=0.473;VQSLOD=3.2092;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:28:38.18:705,38,0	0/1:8,0:8:42.16:74,0,42	0/1:19,0:11:0.40:0,0,125	0/0:7,0:5:3.01:0,3,84	1/1:23,0:19:15.03:314,15,0	1/1:15,0:13:16.34:188,16,0	0/1:11,0:10:20.69:92,0,21	1/1:21,0:19:6.70:448,7,0	0/1:13,0:12:2.15:254,0,2	1/1:26,0:23:50.07:630,50,0	1/1:13,0:12:4.03:224,4,0	1/1:15,0:15:11.91:118,12,0	1/1:13,0:12:15:176,15,0	1/1:10,0:11:14.85:177,15,0	1/1:8,0:7:6.02:137,6,0	1/1:14,0:12:20.92:219,21,0	0/1:10,0:6:10.91:126,0,11	0/1:18,0:14:22.27:90,0,22	./.	./.	./.	1/1:9,0:9:12.92:170,13,0	0/1:12,2:19:13.81:86,0,14	1/1:14,0:13:18.31:156,18,0	1/1:21,0:18:21.02:291,21,0	1/1:19,0:18:5.11:444,5,0	1/1:15,0:14:7.09:290,7,0	1/1:11,0:8:15:191,15,0
chr10	13194735	.	C	CTTTTTTTTTT	11566.77	PASS	AB=1.000;AC=47;AF=0.940;AN=50;BaseQRankSum=-1.365;DP=435;FS=6.053;HRun=10;HaplotypeScore=118.8934;InbreedingCoeff=0.3799;MQ=49.79;MQ0=23;MQRankSum=-1.968;QD=27.22;ReadPosRankSum=-0.720;VQSLOD=1.4368;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:28:67.20:1352,67,0	1/1:4,0:8:3.01:102,3,0	0/1:13,0:7:4.22:4,0,100	0/0:6,0:4:2.97:0,3,75	1/1:5,19:35:15.05:472,15,0	1/1:15,0:13:19.88:367,20,0	1/1:4,0:14:3.01:144,3,0	1/1:8,0:27:52.38:1167,52,0	1/1:12,0:11:21.54:422,22,0	1/1:28,0:25:60.14:1165,60,0	1/1:7,0:20:24.08:435,24,0	1/1:15,0:15:12.04:219,12,0	1/1:13,0:12:14.88:278,15,0	1/1:12,0:11:18.02:342,18,0	1/1:7,0:6:6.02:207,6,0	1/1:14,0:12:24.05:425,24,0	1/1:9,0:10:8.77:342,9,0	1/1:15,0:11:9.03:195,9,0	./.	./.	./.	1/1:8,0:8:18.01:326,18,0	1/1:23,0:19:10.39:180,10,0	1/1:14,0:13:18.53:333,19,0	1/1:20,0:17:21.07:476,21,0	1/1:7,0:26:69.19:1544,69,0	1/1:18,0:16:36.04:693,36,0	1/1:11,0:8:18.05:377,18,0
chr10	13195105	.	AACAT	A	990.41	PASS	AB=0.857;AC=27;AF=0.964;AN=28;DP=380;FS=0.000;HRun=0;HaplotypeScore=105.5926;InbreedingCoeff=0.1168;MQ=71.79;MQ0=0;QD=4.88;VQSLOD=1.7953;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:18:2.74:12,3,0	1/1:3,0:3:3:28,3,0	./.	./.	./.	1/1:19,0:19:2.04:6,2,0	./.	./.	1/1:19,0:19:2.97:20,3,0	1/1:10,0:10:3:28,3,0	./.	./.	./.	./.	./.	./.	1/1:14,0:14:6.01:56,6,0	1/1:19,0:17:3:28,3,0	1/1:10,2:12:5.98:93,6,0	1/1:12,1:13:17.97:205,18,0	1/1:22,7:29:35.98:480,36,0	1/1:2,0:2:2.22:7,2,0	./.	1/1:17,0:16:3:28,3,0	0/1:10,0:11:0:0,0,0	./.	1/1:16,0:16:8.96:74,9,0	./.
chr10	13195125	.	T	TAA	3937.91	PASS	AB=0.840;AC=40;AF=0.714;AN=56;BaseQRankSum=2.179;DP=276;FS=2.469;HRun=1;HaplotypeScore=83.6007;InbreedingCoeff=0.5680;MQ=48.86;MQ0=4;MQRankSum=-2.497;QD=21.64;ReadPosRankSum=-1.767;VQSLOD=1.0780;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:33.23:0,33,521	1/1:0,2:3:5.97:46,6,0	0/1:13,0:8:33.08:33,0,182	0/0:17,0:11:27.08:0,27,393	1/1:1,2:3:5.56:30,6,0	0/1:11,3:14:99:182,0,216	0/1:7,1:8:2.72:3,0,84	1/1:1,14:15:42.13:746,42,0	1/1:0,10:11:23.82:221,24,0	1/1:1,3:5:15.04:225,15,0	1/1:1,0:1:0.47:1,0,0	1/1:4,3:7:8.22:221,8,0	1/1:0,5:5:3.01:56,3,0	1/1:3,3:8:15.07:160,15,0	1/1:0,9:9:20.77:139,21,0	1/1:1,7:8:17.44:110,17,0	0/1:3,6:11:4.23:116,0,4	1/1:8,5:12:24.83:320,25,0	0/0:11,0:9:27.05:0,27,363	0/0:9,0:9:24.06:0,24,321	0/0:32,0:32:68.90:0,69,836	1/1:1,0:2:4.41:16,4,0	1/1:3,1:4:5.98:71,6,0	1/1:10,4:14:21.01:280,21,0	0/0:10,0:9:23.89:0,24,290	1/1:2,11:11:30.09:539,30,0	1/1:3,3:9:26.48:343,26,0	1/1:1,2:2:5.99:79,6,0
chr10	13195127	.	C	CTA	221.73	PASS	AB=0.939;AC=18;AF=0.321;AN=56;BaseQRankSum=6.828;DP=280;FS=30.761;HRun=0;HaplotypeScore=108.7363;InbreedingCoeff=0.1379;MQ=47.38;MQ0=4;MQRankSum=-4.887;QD=2.05;ReadPosRankSum=-0.933;VQSLOD=0.4637;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:40.32:0,40,632	1/1:4,0:4:0.39:3,0,0	0/1:15,0:9:17.63:18,0,221	0/0:20,0:13:30.09:0,30,440	0/0:2,1:3:1.55:0,2,4	0/0:15,0:15:30.91:0,31,271	0/0:8,0:8:12.57:0,13,139	0/0:11,0:11:24.70:0,25,133	0/0:11,0:11:4.68:0,5,93	0/0:5,0:5:9.99:0,10,70	1/1:1,0:1:2.50:9,2,0	0/1:8,1:9:5.40:5,0,60	1/1:4,0:4:3.40:17,3,0	0/1:7,0:7:6.18:6,0,33	1/1:11,0:11:2.79:17,3,0	0/1:8,1:9:13.14:13,0,28	0/1:11,1:12:36.71:37,0,54	0/1:12,2:12:31.91:92,0,32	0/0:11,0:9:27.05:0,27,385	0/0:9,0:9:24.06:0,24,339	0/0:33,0:33:66.07:0,66,862	1/1:2,1:3:7.20:70,7,0	0/0:3,0:3:2.22:0,2,7	0/1:10,1:10:14.82:15,0,37	0/0:9,0:8:21.07:0,21,341	0/0:13,0:11:20.06:0,20,106	0/1:8,0:8:27.08:72,0,27	0/0:3,0:2:5.89:0,6,37
chr10	13195149	.	TAC	T	389.17	PASS	AB=0.948;AC=16;AF=0.296;AN=54;BaseQRankSum=6.372;DP=265;FS=1.788;HRun=0;HaplotypeScore=114.0035;InbreedingCoeff=0.2175;MQ=42.08;MQ0=3;MQRankSum=-2.254;QD=4.58;ReadPosRankSum=4.509;VQSLOD=2.2774;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:13.07:0,13,297	0/1:3,0:3:5.36:39,0,5	0/0:29,0:16:48.16:0,48,708	0/0:18,0:10:19.89:0,20,312	0/1:2,0:2:0.14:0,0,25	1/1:5,6:11:18.52:255,19,0	0/1:2,5:7:12.59:52,0,13	0/0:9,0:10:21.83:0,22,181	0/1:9,0:9:1.20:1,0,66	1/1:1,0:1:2.99:24,3,0	1/1:1,0:1:1.25:3,1,0	0/0:10,0:10:13.11:0,13,76	0/0:2,0:2:4.30:0,4,16	0/0:5,0:5:2.90:0,3,21	0/0:9,0:9:14.32:0,14,84	0/0:4,0:4:5.60:0,6,26	1/1:12,0:12:8.47:63,8,0	0/1:16,0:14:30.93:43,0,31	0/0:10,0:9:16.12:0,16,206	0/0:8,0:8:6.24:0,6,64	0/0:33,0:33:30.53:0,31,457	0/1:4,0:4:5.74:8,0,6	0/0:3,1:4:5.92:0,6,44	0/1:8,0:8:14.68:15,0,25	0/0:9,0:9:18.03:0,18,261	0/0:10,0:8:17.57:0,18,116	0/1:11,0:11:35.68:36,0,81	./.
chr10	13195151	.	C	CAT	281.61	PASS	AB=0.963;AC=15;AF=0.278;AN=54;BaseQRankSum=4.369;DP=274;FS=29.805;HRun=0;HaplotypeScore=125.8909;InbreedingCoeff=0.2416;MQ=41.89;MQ0=3;MQRankSum=-2.047;QD=3.39;ReadPosRankSum=1.568;VQSLOD=1.1452;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:21.35:0,21,307	0/1:3,0:3:2.26:4,0,2	0/0:32,0:16:48.16:0,48,689	0/0:21,0:11:19.85:0,20,300	0/0:2,0:2:0.17:0,0,8	1/1:10,0:11:20.99:272,21,0	1/1:10,0:10:4.74:59,5,0	0/0:10,0:10:21.21:0,21,174	0/1:8,0:8:2.79:3,0,32	0/0:3,0:3:1.45:0,1,5	1/1:1,0:1:2.94:18,3,0	0/0:10,0:10:5.10:0,5,16	1/1:2,0:2:0.92:3,1,0	0/0:5,0:5:4.94:0,5,27	0/0:10,0:10:0.39:0,0,24	0/0:4,0:4:1.14:0,1,10	0/1:9,3:12:9.50:23,0,10	0/1:15,1:14:16.77:17,0,19	0/0:10,0:10:26.69:0,27,290	0/1:7,0:7:6.34:6,0,94	0/0:32,0:32:59.83:0,60,750	0/1:5,0:5:7.48:12,0,7	0/0:4,0:4:2.51:0,3,7	0/1:8,0:8:0.87:1,0,7	0/0:9,0:9:18.06:0,18,275	0/0:9,0:8:11.90:0,12,68	0/0:10,1:11:13.22:0,13,57	./.
chr10	13195159	.	CATAA	C	452.18	PASS	AB=0.847;AC=14;AF=0.259;AN=54;BaseQRankSum=6.019;DP=284;FS=20.034;HRun=0;HaplotypeScore=122.3583;InbreedingCoeff=-0.0984;MQ=51.20;MQ0=4;MQRankSum=-0.946;QD=4.57;ReadPosRankSum=1.023;VQSLOD=1.3005;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:16:19.15:0,19,658	1/1:2,1:3:1.06:46,1,0	0/0:39,0:21:55.21:0,55,1215	0/0:25,0:14:33.09:0,33,593	0/0:2,0:2:1.27:0,1,5	0/1:12,0:13:37.93:49,0,38	0/1:10,0:10:6.95:7,0,76	0/0:15,0:15:33.68:0,34,231	0/1:4,1:5:5.07:28,0,5	0/1:3,1:4:31.36:32,0,31	0/0:1,0:1:0.89:0,1,2	0/0:10,0:10:1.42:0,1,8	0/0:3,0:3:0.17:0,0,16	0/0:2,2:4:4.97:0,5,33	0/0:7,0:7:9.48:0,9,59	1/1:4,0:4:0.79:19,1,0	0/1:10,5:15:12.43:133,0,12	0/1:15,2:15:55.77:66,0,56	0/0:10,0:9:23.87:0,24,452	0/0:4,0:4:12.03:0,12,154	0/0:33,0:33:75.05:0,75,1125	0/1:5,1:6:15.84:16,0,27	0/1:3,1:4:30.30:30,0,36	0/1:5,1:6:29.77:30,0,33	0/0:8,0:8:18.06:0,18,431	0/0:8,0:6:7.87:0,8,49	0/1:8,2:12:31.02:134,0,31	./.
chr10	13195165	.	CAT	C	500.30	PASS	AB=0.927;AC=19;AF=0.339;AN=56;BaseQRankSum=2.685;DP=322;FS=19.942;HRun=0;HaplotypeScore=116.1701;InbreedingCoeff=-0.0515;MQ=50.99;MQ0=6;MQRankSum=-0.222;QD=3.71;ReadPosRankSum=-2.682;VQSLOD=0.8797;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:21.59:0,22,303	1/1:2,1:3:1.80:31,2,0	0/0:42,0:22:27.92:0,28,600	0/0:26,0:15:19.93:0,20,446	0/1:4,0:4:3.43:40,0,3	0/1:13,0:13:53.36:71,0,53	0/0:10,0:10:14.25:0,14,120	0/0:15,0:15:30.37:0,30,355	0/1:6,1:7:9.20:11,0,9	0/1:5,1:6:19.94:20,0,52	1/1:4,0:4:3.39:18,3,0	0/1:11,0:11:10.47:12,0,10	0/0:3,0:3:2.61:0,3,9	0/0:4,2:6:7.66:0,8,39	0/0:8,0:8:0.77:0,1,72	0/1:4,0:4:0.29:36,0,0	0/1:12,5:17:18.30:98,0,18	0/1:18,2:18:20.52:21,0,41	0/0:12,0:11:26:0,26,223	0/1:5,0:5:29.17:29,0,68	0/0:33,0:33:36.59:0,37,587	0/1:5,1:6:4.73:47,0,5	0/0:5,0:5:9.94:0,10,51	0/1:10,1:10:18.61:62,0,19	0/0:11,0:11:18.01:0,18,220	0/1:10,0:8:5.93:6,0,44	0/1:11,2:13:39.48:127,0,39	1/1:1,0:1:3:25,3,0
chr10	13195167	.	T	TACAC	7810.61	PASS	AB=0.896;AC=49;AF=0.875;AN=56;BaseQRankSum=-1.716;DP=345;FS=5.432;HRun=0;HaplotypeScore=105.9557;InbreedingCoeff=0.4088;MQ=52.97;MQ0=7;MQRankSum=-1.253;QD=28.40;ReadPosRankSum=0.741;VQSLOD=4.4632;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,0:16:26.83:118,27,0	1/1:1,2:3:9.03:170,9,0	0/0:43,0:21:13.53:0,14,223	0/0:27,0:16:20.51:0,21,295	1/1:4,2:6:11.91:134,12,0	0/1:13,0:13:11.35:66,0,11	0/1:10,0:10:9.94:16,0,10	1/1:11,8:23:35.70:556,36,0	1/1:4,3:7:20.88:355,21,0	1/1:4,1:6:17.78:286,18,0	1/1:4,0:4:9:89,9,0	1/1:0,11:11:15.05:348,15,0	1/1:1,2:3:9.03:215,9,0	1/1:4,0:6:11.48:115,11,0	1/1:6,2:9:26.80:497,27,0	1/1:2,2:4:12.04:282,12,0	1/1:14,4:18:38.98:731,39,0	1/1:4,17:20:26.81:524,27,0	1/1:8,5:13:15.01:267,15,0	1/1:0,4:6:9.03:217,9,0	1/1:13,21:35:42.01:1025,42,0	1/1:2,4:7:15.05:336,15,0	1/1:4,1:5:11.14:161,11,0	1/1:10,2:11:17.13:251,17,0	0/1:6,0:11:29.77:66,0,30	1/1:6,3:8:20.75:339,21,0	1/1:10,1:13:30.82:598,31,0	1/1:1,0:1:3.01:49,3,0
chr10	13195301	.	A	AATAT	242.70	PASS	AB=1.000;AC=7;AF=0.140;AN=50;BaseQRankSum=1.126;DP=228;FS=3.619;HRun=0;HaplotypeScore=43.8155;InbreedingCoeff=0.4690;MQ=71.11;MQ0=1;MQRankSum=0.104;QD=6.22;ReadPosRankSum=-1.553;VQSLOD=1.0619;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:4,2:6:9.03:192,9,0	0/0:3,0:3:6.02:0,6,101	1/1:7,0:7:2.04:6,2,0	0/1:20,0:11:1.17:1,0,54	0/0:6,0:6:15.04:0,15,227	0/0:4,0:6:7.23:0,7,52	0/0:2,0:5:6.01:0,6,56	0/0:42,0:40:75.21:0,75,1210	0/0:6,0:7:11.99:0,12,171	0/0:9,0:9:12.01:0,12,153	0/0:8,0:8:15.05:0,15,253	./.	0/0:3,0:3:2.92:0,3,17	0/0:3,0:3:5.99:0,6,73	./.	0/0:3,0:3:3.01:0,3,51	0/0:18,0:18:48.12:0,48,761	0/0:17,0:17:36.12:0,36,583	0/0:8,0:8:21.06:0,21,331	0/0:6,0:6:9.03:0,9,152	./.	0/0:4,0:4:9.01:0,9,125	0/0:2,0:2:6.02:0,6,101	0/0:2,0:2:2.97:0,3,20	1/1:2,3:5:6.02:149,6,0	0/0:9,0:9:18.06:0,18,302	0/0:13,0:13:30.10:0,30,503	0/0:12,0:12:36.12:0,36,608
chr10	13195383	.	CATACATAT	C	690.36	PASS	AB=0.817;AC=18;AF=0.474;AN=38;BaseQRankSum=-1.208;DP=192;FS=2.874;HRun=0;HaplotypeScore=58.4738;InbreedingCoeff=0.3511;MQ=51.49;MQ0=13;MQRankSum=-0.110;QD=8.42;ReadPosRankSum=1.915;VQSLOD=1.2395;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:3,0:3:6.02:0,6,186	1/1:5,1:6:3.01:48,3,0	0/0:23,0:5:6.02:0,6,99	0/0:24,0:7:8.24:0,8,112	0/0:6,3:9:0:0,0,0	0/0:3,0:3:0:0,0,0	./.	1/1:25,0:25:36.33:318,36,0	./.	1/1:1,0:1:3.01:50,3,0	./.	./.	1/1:1,1:2:2.93:24,3,0	1/1:3,0:3:1.55:4,2,0	./.	0/0:1,1:2:0:0,0,0	1/1:12,0:12:7.34:94,7,0	1/1:10,0:10:5.95:44,6,0	0/0:6,0:5:9.02:0,9,163	0/0:10,0:10:3:0,3,25	./.	./.	./.	./.	0/0:3,0:3:3.01:0,3,70	0/1:6,2:8:22.30:95,0,22	0/1:4,1:5:12.61:17,0,13	1/1:7,3:8:6.02:119,6,0
chr10	13195395	.	CAT	C	214.76	PASS	AB=0.667;AC=6;AF=0.158;AN=38;BaseQRankSum=1.032;DP=197;FS=0.000;HRun=0;HaplotypeScore=51.6648;InbreedingCoeff=0.0405;MQ=38.34;MQ0=13;MQRankSum=-1.760;QD=6.51;ReadPosRankSum=-2.064;VQSLOD=1.8063;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:2,0:2:6.02:0,6,106	0/0:3,5:8:2.98:0,3,22	0/0:26,0:5:11.92:0,12,132	0/0:17,0:4:10.06:0,10,111	0/0:6,8:14:0:0,0,0	0/0:3,0:3:0:0,0,0	./.	0/0:25,0:24:7.29:0,7,233	./.	0/1:1,2:3:13.37:67,0,13	./.	./.	0/0:2,0:2:2.99:0,3,23	0/0:2,1:3:3:0,3,29	./.	0/0:2,0:2:0:0,0,0	0/0:7,3:10:10.33:0,10,56	1/1:8,0:8:3.56:55,4,0	0/0:7,0:6:11.97:0,12,178	0/0:11,0:11:3.01:0,3,48	./.	./.	./.	./.	0/0:2,0:2:3.01:0,3,53	0/1:6,5:10:24.11:130,0,24	0/1:3,2:5:13.40:35,0,13	0/1:3,3:6:28.89:29,0,32
chr10	13195409	.	C	CATACAT	757.16	PASS	AB=0.943;AC=15;AF=0.417;AN=36;BaseQRankSum=1.808;DP=217;FS=4.854;HRun=0;HaplotypeScore=64.7934;InbreedingCoeff=0.2276;MQ=35.64;MQ0=13;MQRankSum=-2.921;QD=6.88;ReadPosRankSum=0.995;VQSLOD=0.9628;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:2,0:2:6.02:0,6,119	./.	0/0:24,0:6:18.06:0,18,313	0/0:18,0:4:8.99:0,9,143	1/1:13,0:13:0.47:1,0,0	0/1:4,0:4:0:0,0,0	./.	0/1:30,0:29:3.76:4,0,103	./.	1/1:6,0:6:11.47:182,11,0	./.	./.	0/0:2,0:2:0.46:0,0,1	0/0:3,0:3:2.99:0,3,23	./.	./.	0/1:11,0:11:10.30:10,0,34	0/1:3,6:9:8.78:110,0,9	0/0:7,0:6:2.90:0,3,16	0/1:11,0:11:0:0,0,0	./.	0/1:4,0:4:0:0,0,0	./.	./.	0/0:2,0:2:3.01:0,3,74	1/1:11,0:10:24.03:421,24,0	1/1:5,0:5:3.01:75,3,0	0/1:6,0:6:11.50:65,0,12
chr10	13195413	.	CATATACATAT	C	373.10	PASS	AB=1.000;AC=11;AF=0.324;AN=34;BaseQRankSum=1.462;DP=211;FS=20.273;HRun=0;HaplotypeScore=59.8645;InbreedingCoeff=0.1803;MQ=35.01;MQ0=12;MQRankSum=0.348;QD=5.33;ReadPosRankSum=0.371;VQSLOD=-0.3261;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:2,0:2:3.01:0,3,44	./.	0/0:22,0:5:15.05:0,15,277	0/0:17,0:4:5.74:0,6,72	0/0:10,3:13:0:0,0,0	0/0:1,2:4:0.47:0,0,1	./.	0/1:28,0:26:68.89:69,0,464	./.	0/1:7,0:7:50.82:51,0,132	./.	./.	1/1:2,0:2:2.92:23,3,0	./.	./.	0/0:1,1:2:0:0,0,0	1/1:8,2:10:2.90:68,3,0	0/0:8,0:8:3.01:0,3,51	1/1:7,0:6:5.53:64,6,0	0/0:11,0:11:0:0,0,0	./.	./.	./.	./.	0/0:2,0:2:2.94:0,3,18	0/1:10,0:9:52.75:53,0,174	0/0:3,1:4:3.01:0,3,42	1/1:6,0:6:8.96:153,9,0
chr10	13195415	.	TATACATATACACACAC	T	1637.49	PASS	AB=1.000;AC=19;AF=0.559;AN=34;BaseQRankSum=1.908;DP=207;FS=1.532;HRun=0;HaplotypeScore=60.1252;InbreedingCoeff=0.4244;MQ=34.98;MQ0=12;MQRankSum=-0.088;QD=19.97;ReadPosRankSum=1.106;VQSLOD=1.6950;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:2,0:2:16:18,0,16	./.	0/0:22,0:5:15.05:0,15,327	0/0:16,0:4:5.30:0,5,51	0/0:10,2:13:0.47:0,0,1	0/0:3,0:3:0:0,0,0	./.	1/1:5,20:23:42.37:500,42,0	./.	1/1:7,0:7:15.05:197,15,0	./.	./.	1/1:1,1:2:2.94:23,3,0	./.	./.	0/0:1,1:2:0:0,0,0	1/1:11,0:11:2.94:51,3,0	1/1:8,0:8:3.01:44,3,0	1/1:2,5:6:15:231,15,0	0/0:0,11:11:0:0,0,0	./.	./.	./.	./.	0/0:2,0:2:3.01:0,3,73	1/1:8,2:9:24.08:417,24,0	1/1:3,1:4:2.99:36,3,0	1/1:3,3:6:6.49:233,6,0
chr10	13195419	.	CATAT	C	153.92	PASS	AB=0.917;AC=12;AF=0.333;AN=36;BaseQRankSum=1.321;DP=206;FS=5.458;HRun=0;HaplotypeScore=49.4754;InbreedingCoeff=0.2726;MQ=34.78;MQ0=13;MQRankSum=2.179;QD=3.14;ReadPosRankSum=-0.321;VQSLOD=0.9085;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:1,0:1:3.01:48,3,0	./.	0/0:21,0:5:14.86:0,15,178	0/0:13,0:4:5.64:0,6,38	0/0:14,0:14:0:0,0,0	0/0:2,1:3:0:0,0,0	0/1:3,3:6:0.04:0,0,0	0/0:26,0:23:19.33:0,19,493	./.	0/1:7,0:7:5.27:5,0,173	./.	./.	0/0:1,0:1:0:0,0,0	./.	./.	0/0:2,0:2:0:0,0,0	1/1:11,0:11:2.97:34,3,0	0/0:8,0:8:3.01:0,3,66	0/1:7,0:6:11.84:57,0,12	0/0:11,0:11:0:0,0,0	./.	./.	./.	./.	1/1:1,0:1:3.01:49,3,0	0/1:10,0:9:2.21:2,0,274	0/0:4,0:4:3.01:0,3,66	1/1:6,0:6:6:60,6,0
chr10	13195669	.	ACAACAGCAACAACAACAT	A	20895.64	PASS	AB=1.000;AC=42;AF=0.750;AN=56;BaseQRankSum=13.002;DP=552;FS=9.668;HRun=0;HaplotypeScore=228.0978;InbreedingCoeff=0.2104;MQ=55.66;MQ0=2;MQRankSum=-7.608;QD=47.17;ReadPosRankSum=8.612;VQSLOD=2.0648;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:57.88:0,58,2892	1/1:9,0:9:15.05:680,15,0	0/0:47,0:35:61.84:0,62,3748	0/0:36,0:33:92.58:0,93,3985	0/1:9,0:9:13.91:396,0,14	1/1:26,0:26:36.12:1522,36,0	0/1:28,0:28:5.91:594,0,6	1/1:45,0:45:73.25:1966,73,0	0/1:27,0:27:11.78:1447,0,12	1/1:21,0:21:31.08:1884,31,0	1/1:11,0:11:1.04:580,1,0	1/1:24,0:24:9.13:1402,9,0	1/1:16,0:16:27.09:1205,27,0	1/1:17,0:17:15.05:646,15,0	1/1:18,0:18:10.12:1401,10,0	1/1:11,0:11:9.03:378,9,0	0/1:15,0:15:41.06:136,0,41	0/1:19,0:19:30.57:126,0,31	1/1:0,17:19:54.03:1531,54,0	1/1:0,11:11:24.08:1192,24,0	1/1:0,23:23:3.01:81,3,0	1/1:11,0:11:23.91:604,24,0	1/1:15,0:15:24.08:928,24,0	0/1:24,0:24:53.66:364,0,54	0/1:6,0:6:5.71:6,0,499	1/1:18,0:18:48.02:1172,48,0	0/1:16,0:16:8.92:387,0,9	1/1:4,0:4:6.02:270,6,0
chr10	13195672	.	ACAGCAACAACAACATCAT	A	24695.94	PASS	AB=0.681;AC=47;AF=0.839;AN=56;BaseQRankSum=11.477;DP=546;FS=8.104;HRun=0;HaplotypeScore=211.9229;InbreedingCoeff=0.5314;MQ=54.00;MQ0=2;MQRankSum=-5.001;QD=56.51;ReadPosRankSum=6.771;VQSLOD=3.0955;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:59.79:0,60,2806	1/1:0,9:9:15.05:778,15,0	0/0:48,0:34:48.94:0,49,3172	0/0:35,0:32:96.07:0,96,3641	1/1:1,8:9:9.03:467,9,0	1/1:0,25:25:36.12:1758,36,0	1/1:0,24:25:15.05:706,15,0	1/1:1,45:46:99:3044,135,0	1/1:0,25:25:33.11:1703,33,0	1/1:1,21:22:57.16:2307,57,0	1/1:0,11:11:18.06:717,18,0	1/1:1,23:24:33.11:1643,33,0	1/1:0,16:16:27.09:1363,27,0	1/1:0,16:16:15.05:745,15,0	1/1:1,17:18:33.11:1646,33,0	1/1:0,10:10:9.03:436,9,0	1/1:2,12:14:4.58:189,5,0	0/1:2,15:17:9.82:150,0,10	1/1:19,0:19:50.76:1281,51,0	1/1:11,0:11:24.08:1051,24,0	1/1:23,0:23:3.01:67,3,0	1/1:0,11:11:24.08:762,24,0	1/1:0,14:15:24.08:1074,24,0	0/1:1,23:24:35.67:440,0,36	0/1:6,0:6:5.71:6,0,436	1/1:0,20:20:57.16:1591,57,0	1/1:0,17:17:8.06:461,8,0	1/1:0,4:4:6.02:311,6,0
chr10	13195684	.	ACAT	A	4059.23	PASS	AC=50;AF=0.926;AN=54;BaseQRankSum=8.034;DP=540;FS=4.841;HRun=0;HaplotypeScore=178.8068;InbreedingCoeff=0.6836;MQ=49.70;MQ0=6;MQRankSum=-0.535;QD=9.33;ReadPosRankSum=5.190;VQSLOD=3.0355;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,21:25:42.11:576,42,0	1/1:9,0:9:14.88:106,15,0	0/0:46,0:26:25.68:0,26,327	0/0:35,0:29:44.89:0,45,478	1/1:8,0:8:8.93:63,9,0	1/1:25,0:25:35.64:244,36,0	1/1:25,0:25:14.76:94,15,0	1/1:46,0:46:54.24:367,54,0	1/1:25,0:25:32.70:229,33,0	1/1:21,0:21:47.79:316,48,0	1/1:11,0:11:16.26:98,16,0	1/1:23,0:23:31.92:211,32,0	1/1:16,0:16:26.15:173,26,0	1/1:16,0:16:13.91:88,14,0	1/1:17,0:17:30.90:195,31,0	1/1:10,0:10:8.16:48,8,0	1/1:14,0:14:5.95:42,6,0	1/1:16,0:16:2.98:21,3,0	1/1:19,0:19:39.04:278,39,0	1/1:11,0:11:23.92:196,24,0	./.	1/1:11,0:11:23.73:160,24,0	1/1:15,0:15:21.26:144,21,0	1/1:24,0:24:8.91:61,9,0	1/1:3,3:7:5.61:53,6,0	1/1:20,0:20:26.23:188,26,0	1/1:17,0:17:8.65:63,9,0	1/1:4,0:4:5.95:42,6,0
chr10	13195925	.	G	GA	1462.59	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-8.374;DP=603;FS=0.000;HRun=7;HaplotypeScore=95.0166;InbreedingCoeff=0.9873;MQ=86.93;MQ0=0;MQRankSum=-1.045;QD=26.12;ReadPosRankSum=-1.604;VQSLOD=3.0939;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:87.11:0,87,829	0/0:10,0:10:30.05:0,30,289	0/0:18,0:19:35.96:0,36,347	0/0:24,0:24:26.02:0,26,390	0/0:20,0:20:45.05:0,45,429	0/0:18,0:18:48.08:0,48,463	0/0:24,0:24:60.09:0,60,579	0/0:21,0:21:54.07:0,54,515	0/0:21,0:21:54.07:0,54,516	0/0:23,0:23:60.06:0,60,572	0/0:16,0:16:33:0,33,310	0/0:18,0:18:48.08:0,48,464	0/0:15,0:15:36.05:0,36,348	0/0:20,0:20:57.09:0,57,550	0/0:19,0:19:54.06:0,54,510	0/0:17,0:17:51.08:0,51,493	0/0:58,0:58:99:0,156,1501	0/0:30,0:30:46.89:0,47,563	1/1:2,11:13:33.07:374,33,0	1/1:2,15:17:36.11:434,36,0	1/1:1,25:26:66.20:797,66,0	0/0:19,0:19:36.03:0,36,347	0/0:20,0:20:45.06:0,45,434	0/0:38,0:38:99:0,108,1042	0/0:13,0:13:24.02:0,24,231	0/0:22,0:22:54.07:0,54,521	0/0:26,0:26:69.10:0,69,665	0/0:5,0:5:12.02:0,12,116
chr10	13196452	.	TGG	T	16282.11	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=15.592;DP=714;FS=22.291;HRun=4;HaplotypeScore=147.8105;InbreedingCoeff=0.9996;MQ=87.97;MQ0=0;MQRankSum=-7.171;QD=36.10;ReadPosRankSum=7.116;VQSLOD=3.1006;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,132,2389	1/1:1,9:10:24.08:353,24,0	0/0:22,0:23:63.03:0,63,1105	0/0:37,0:34:99:0,99,1790	1/1:3,15:18:35.86:528,36,0	0/0:32,0:32:81.25:0,81,1433	0/0:22,0:22:63.22:0,63,1180	1/1:2,26:28:78.23:1104,78,0	1/1:0,27:27:78.26:1148,78,0	1/1:3,23:26:69.23:1011,69,0	1/1:1,17:19:42.14:618,42,0	1/1:2,29:31:87.29:1280,87,0	1/1:0,23:23:57.14:839,57,0	1/1:0,27:27:69.23:1015,69,0	1/1:1,28:29:66.22:971,66,0	1/1:1,24:25:63.21:927,63,0	1/1:0,31:31:81.27:1192,81,0	1/1:2,19:21:42.14:618,42,0	0/0:23,0:23:60.17:0,60,1033	0/0:17,0:17:42.13:0,42,732	0/0:43,0:43:99:0,120,2195	1/1:3,17:20:39.13:574,39,0	1/1:3,19:23:41.80:618,42,0	1/1:3,35:38:87.29:1280,87,0	0/0:17,0:17:42:0,42,755	1/1:2,20:22:60.20:881,60,0	1/1:1,15:16:42.14:617,42,0	1/1:0,17:17:48.16:707,48,0
chr10	13199239	.	GGATAGATAGATAGATA	G	8000.96	PASS	AB=0.814;AC=34;AF=0.708;AN=48;BaseQRankSum=5.413;DP=674;FS=6.586;HRun=0;HaplotypeScore=200.0385;InbreedingCoeff=0.6254;MQ=53.67;MQ0=28;MQRankSum=-6.201;QD=20.00;ReadPosRankSum=-0.653;VQSLOD=3.2889;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:57:99:0,99,5260	1/1:4,8:12:3.01:132,3,0	./.	./.	1/1:5,12:16:6.02:265,6,0	0/0:13,0:26:33.11:0,33,1173	0/0:16,0:31:27.09:0,27,822	1/1:26,0:21:17.96:256,18,0	1/1:3,21:22:18.06:785,18,0	1/1:9,17:25:41.92:789,42,0	./.	1/1:7,15:21:12.04:530,12,0	1/1:8,14:19:3.01:132,3,0	1/1:8,16:23:12.04:529,12,0	1/1:11,25:33:12.04:530,12,0	1/1:2,14:13:9.03:397,9,0	1/1:11,14:25:6.02:265,6,0	1/1:5,11:14:6.02:261,6,0	0/1:18,0:13:9:9,0,97	0/0:16,0:17:21:0,21,311	0/0:12,0:31:9.01:0,9,190	1/1:4,27:29:29.97:1324,30,0	1/1:11,19:30:20.32:926,20,0	./.	0/0:29,0:29:75.14:0,75,4127	0/1:9,13:18:12.09:342,0,12	1/1:6,20:21:9.03:397,9,0	1/1:2,5:7:3.01:132,3,0
chr10	13199956	.	TCATCCTCAC	T	8469	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=2.017;DP=807;FS=8.706;HRun=0;HaplotypeScore=251.7562;InbreedingCoeff=0.7531;MQ=58.81;MQ0=6;MQRankSum=2.913;QD=11.46;ReadPosRankSum=4.340;VQSLOD=1.9579;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:49,0:46:53.92:444,54,0	1/1:14,0:13:32.93:304,33,0	0/0:23,0:17:8.82:0,9,56	0/0:44,0:39:11.75:0,12,80	1/1:13,0:12:20.94:168,21,0	1/1:16,0:14:14.94:148,15,0	1/1:40,0:39:26.47:217,26,0	1/1:28,0:25:6.01:55,6,0	1/1:48,0:48:92.81:778,93,0	1/1:23,0:23:23.93:208,24,0	1/1:16,0:14:11.93:93,12,0	1/1:35,0:34:56.93:496,57,0	1/1:28,0:28:41.90:363,42,0	1/1:31,0:31:68.91:572,69,0	1/1:33,0:33:59.90:612,60,0	1/1:29,0:29:56.91:496,57,0	1/1:51,0:50:80.52:728,81,0	1/1:28,0:27:47.91:416,48,0	1/1:20,7:25:20.96:173,21,0	1/1:9,0:9:3:25,3,0	1/1:88,0:86:95.11:757,95,0	1/1:15,0:14:14.98:125,15,0	1/1:16,0:16:12:124,12,0	1/1:38,0:37:56.84:477,57,0	1/1:13,0:13:11.36:88,11,0	1/1:26,0:25:35.93:343,36,0	1/1:9,0:8:11.61:77,12,0	1/1:16,0:16:17.99:187,18,0
chr10	13201336	.	T	TG	133.59	PASS	AC=20;AF=0.909;AN=22;DP=63;FS=0.000;HRun=1;HaplotypeScore=56.9397;InbreedingCoeff=0.0002;MQ=25.80;MQ0=9;QD=3.26;VQSLOD=-0.1813;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	1/1:8,0:7:3.27:15,3,0	./.	./.	0/0:7,0:5:0:0,0,0	./.	1/1:1,1:1:2.98:21,3,0	./.	./.	1/1:2,0:1:2.84:14,3,0	1/1:6,0:5:2.97:20,3,0	./.	./.	./.	1/1:0,1:1:2.97:20,3,0	./.	./.	1/1:0,1:1:2.92:17,3,0	./.	1/1:5,1:6:5.92:39,6,0	./.	1/1:5,1:4:2.97:20,3,0	./.	./.	1/1:7,0:7:2.97:20,3,0	1/1:2,0:2:2.96:19,3,0	./.	./.
chr10	13201737	.	C	CCCTGGGCATGTG	5377.56	PASS	AB=0.944;AC=25;AF=0.595;AN=42;BaseQRankSum=0.497;DP=384;FS=5.809;HRun=0;HaplotypeScore=79.2561;InbreedingCoeff=0.0082;MQ=29.45;MQ0=183;MQRankSum=-1.355;QD=21.77;ReadPosRankSum=-2.527;VQSLOD=2.3790;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:10:6:226,6,0	./.	0/0:43,0:1:3.01:0,3,105	0/0:50,0:2:0.89:0,1,2	./.	1/1:6,0:5:12.04:233,12,0	1/1:13,0:10:25.33:397,25,0	0/0:23,0:4:9:0,9,303	0/1:23,0:14:99:559,0,418	0/1:3,0:2:85.36:134,0,85	0/0:2,0:1:0:0,0,0	0/1:22,0:15:81.11:782,0,81	1/1:11,0:9:21.07:812,21,0	0/1:16,0:10:99:313,0,194	1/1:23,0:13:6.02:141,6,0	1/1:13,0:5:9.03:269,9,0	0/1:14,1:8:99:476,0,203	0/1:5,0:3:99:137,0,106	1/1:11,0:7:21.07:747,21,0	1/1:9,0:3:2.97:20,3,0	0/1:12,3:4:0:0,0,0	./.	./.	0/1:15,6:12:0.23:0,0,0	./.	0/1:12,0:10:99:130,0,586	./.	./.
chr10	13201741	.	G	GGGCA	1462.34	PASS	AB=0.978;AC=21;AF=0.525;AN=40;BaseQRankSum=3.261;DP=344;FS=8.274;HRun=0;HaplotypeScore=71.1707;InbreedingCoeff=0.0637;MQ=30.44;MQ0=166;MQRankSum=-2.377;QD=8.12;ReadPosRankSum=-0.703;VQSLOD=1.1654;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:24,2:10:5.97:114,6,0	./.	0/0:41,0:1:3.01:0,3,54	0/0:47,0:2:0:0,0,0	./.	1/1:6,0:5:12.04:177,12,0	1/1:9,0:7:7.97:118,8,0	0/0:22,0:5:12.04:0,12,220	0/1:20,0:12:99:127,0,230	0/0:3,0:1:3.01:0,3,63	0/0:1,0:1:0:0,0,0	0/1:17,2:12:32.85:271,0,33	1/1:8,0:6:12.02:153,12,0	0/1:16,1:11:96.73:97,0,111	1/1:16,1:11:3.01:39,3,0	1/1:10,0:4:6.02:98,6,0	0/1:13,0:7:72.08:72,0,147	0/1:6,0:4:42.71:43,0,57	1/1:8,0:5:10.24:212,10,0	./.	0/1:12,0:6:0:0,0,0	./.	./.	0/0:23,0:13:2.89:0,3,55	./.	0/1:9,0:8:67.54:68,0,346	./.	./.
chr10	13201742	.	T	TGTGC	555.30	PASS	AB=0.975;AC=20;AF=0.500;AN=40;BaseQRankSum=5.145;DP=345;FS=11.944;HRun=0;HaplotypeScore=73.1718;InbreedingCoeff=0.1989;MQ=30.43;MQ0=166;MQRankSum=-1.361;QD=3.27;ReadPosRankSum=-1.170;VQSLOD=0.5413;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:10:5.99:53,6,0	./.	0/0:40,0:1:3.01:0,3,52	0/0:47,0:2:0:0,0,0	./.	1/1:5,0:5:11.90:87,12,0	1/1:9,0:7:12.78:82,13,0	0/0:22,0:5:13.28:0,13,214	0/1:21,0:12:84.26:84,0,229	0/0:3,0:1:3.01:0,3,62	0/0:2,0:1:0:0,0,0	0/1:17,2:12:46.55:55,0,47	1/1:7,0:5:9.29:76,9,0	0/1:16,1:11:4.01:4,0,114	1/1:17,1:11:2.97:20,3,0	1/1:9,0:4:5.97:47,6,0	0/1:14,0:8:46.06:46,0,130	0/1:6,0:4:16.66:17,0,57	1/1:9,0:5:14.49:114,14,0	./.	0/1:11,0:6:0:0,0,0	./.	./.	0/0:25,0:13:2.89:0,3,39	./.	0/0:9,0:8:6.22:0,6,371	./.	./.
chr10	13201743	.	C	CA	68.63	PASS	AB=0.941;AC=15;AF=0.395;AN=38;BaseQRankSum=4.750;DP=344;FS=5.365;HRun=0;HaplotypeScore=64.6620;InbreedingCoeff=0.1329;MQ=30.64;MQ0=161;MQRankSum=0.656;QD=0.54;ReadPosRankSum=0.621;VQSLOD=1.0862;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:24,1:10:5.54:25,6,0	./.	0/0:38,0:1:3.01:0,3,42	0/0:44,0:2:0:0,0,0	./.	1/1:5,0:5:2.77:13,3,0	1/1:10,1:9:2.38:19,2,0	0/0:22,0:5:15.03:0,15,190	0/0:21,0:12:1.25:0,1,153	0/0:3,0:1:3.01:0,3,39	./.	0/1:19,0:12:28.45:28,0,77	1/1:7,1:5:8.22:36,8,0	0/1:17,0:11:18.31:18,0,70	0/1:14,4:11:0:0,0,0	1/1:9,0:4:2.76:13,3,0	0/0:14,0:8:13.86:0,14,172	0/1:6,0:4:17.10:17,0,36	0/1:7,1:5:15.63:16,0,28	./.	0/0:11,0:6:0.47:0,0,1	./.	./.	0/0:25,0:13:3.48:0,3,42	./.	0/0:9,0:9:2.36:0,2,266	./.	./.
chr10	13201749	.	GTGTGTA	G	98.14	PASS	AB=1.000;AC=14;AF=0.438;AN=32;BaseQRankSum=0.277;DP=351;FS=1.921;HRun=0;HaplotypeScore=69.9478;InbreedingCoeff=-0.0958;MQ=30.33;MQ0=166;MQRankSum=-0.800;QD=0.54;ReadPosRankSum=-0.923;VQSLOD=1.5532;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:12:0:0,0,0	./.	0/0:36,0:1:2.99:0,3,24	0/1:40,0:2:0:0,0,0	./.	./.	1/1:5,6:10:3.01:55,3,0	0/1:21,0:5:20.15:20,0,44	0/1:17,0:11:5.74:6,0,40	1/1:4,0:1:2.99:23,3,0	./.	0/1:15,0:12:8.12:26,0,8	0/0:9,0:5:3.46:0,3,30	0/0:14,0:8:5.84:0,6,36	./.	./.	0/1:15,0:9:27.35:27,0,90	1/1:8,0:5:2.84:15,3,0	0/1:9,0:6:9.38:9,0,46	./.	0/0:17,0:8:0:0,0,1	./.	./.	0/0:24,0:13:3.01:0,3,39	./.	0/1:11,0:8:17.35:17,0,90	./.	./.
chr10	13201755	.	ATGTGTGTGTGTGTG	A	609.43	PASS	AB=0.975;AC=9;AF=0.250;AN=36;BaseQRankSum=-2.158;DP=366;FS=5.096;HRun=0;HaplotypeScore=82.6194;InbreedingCoeff=0.0744;MQ=30.36;MQ0=161;MQRankSum=0.719;QD=5.97;ReadPosRankSum=2.011;VQSLOD=1.3130;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:12:0:0,0,0	./.	./.	0/0:36,0:2:0:0,0,0	0/0:7,0:2:0:0,0,0	./.	0/0:13,0:11:3.48:0,3,36	0/0:22,0:5:6.02:0,6,115	1/1:12,2:11:2.56:109,3,0	1/1:5,1:1:3.01:118,3,0	0/0:5,0:2:0:0,0,0	0/0:13,1:12:6.02:0,6,107	0/0:8,0:5:5.95:0,6,90	0/1:14,0:8:41.65:42,0,87	./.	./.	0/1:17,0:11:99:126,0,480	0/1:7,0:5:49.87:125,0,50	0/0:12,0:8:18.04:0,18,350	0/0:14,0:4:3.01:0,3,45	0/0:22,0:9:0.47:0,0,1	./.	./.	0/0:27,0:14:6.49:0,6,220	./.	0/1:12,2:9:99:191,0,190	./.	./.
chr10	13203324	.	TCAGATTGA	T	6860.16	PASS	AB=0.576;AC=12;AF=0.231;AN=52;BaseQRankSum=12.959;DP=620;FS=32.463;HRun=0;HaplotypeScore=163.1178;InbreedingCoeff=0.7814;MQ=42.91;MQ0=69;MQRankSum=-10.944;QD=49.35;ReadPosRankSum=0.967;VQSLOD=2.5318;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,31:25:54.18:1536,54,0	0/0:7,0:7:21.07:0,21,932	./.	./.	0/0:30,0:28:72.25:0,72,3063	0/1:4,13:9:99:549,0,114	0/1:7,17:20:99:1212,0,278	0/0:26,0:20:60.21:0,60,2518	0/0:35,0:33:81.28:0,81,3625	0/0:30,0:26:78.25:0,78,3350	0/0:14,0:14:33.11:0,33,1451	0/0:21,0:21:48.13:0,48,1881	0/0:22,0:19:39.13:0,39,1715	0/0:25,0:24:57.16:0,57,2284	0/0:26,0:24:60.19:0,60,2623	0/0:20,0:20:51.18:0,51,2338	0/0:31,0:29:84.29:0,84,3508	0/0:17,0:15:36.12:0,36,1616	1/1:2,8:8:24.08:686,24,0	1/1:0,23:23:48.16:1243,48,0	1/1:0,19:19:27.05:642,27,0	0/0:21,0:19:51.18:0,51,2240	0/0:21,0:20:48.13:0,48,2060	0/0:29,0:28:60.21:0,60,2683	1/1:0,15:15:33.11:992,33,0	0/0:27,0:24:72.23:0,72,3028	0/0:23,0:21:38.92:0,39,1754	0/0:11,0:9:24.08:0,24,1035
chr10	13205768	.	T	TA	109.04	PASS	AC=4;AF=0.080;AN=50;BaseQRankSum=-1.316;DP=219;FS=0.000;HRun=9;HaplotypeScore=23.2557;InbreedingCoeff=0.3238;MQ=55.32;MQ0=12;MQRankSum=-0.039;QD=7.79;ReadPosRankSum=0.622;VQSLOD=-0.3367;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:9:24:0,24,208	./.	0/0:14,0:3:0.09:0,0,23	0/0:38,0:6:3.60:0,4,96	0/0:3,0:3:6:0,6,52	1/1:3,9:10:17.79:178,18,0	1/1:1,1:2:3.01:33,3,0	0/0:18,0:12:29.99:0,30,260	0/0:4,0:3:6:0,6,52	0/0:4,0:3:5.99:0,6,52	./.	0/0:1,0:1:3:0,3,26	0/0:5,0:5:12:0,12,104	0/0:4,0:3:3:0,3,26	0/0:3,0:2:3:0,3,26	0/0:1,0:1:3:0,3,26	0/0:16,0:16:32.92:0,33,286	0/0:9,0:9:21:0,21,182	0/0:10,0:8:20.92:0,21,169	0/0:3,0:2:6:0,6,52	./.	0/0:2,0:2:6:0,6,52	0/0:2,0:2:6:0,6,52	0/0:4,0:3:6:0,6,52	0/0:3,0:3:9:0,9,78	0/0:8,0:8:17.99:0,18,156	0/0:5,0:5:2.99:0,3,26	0/0:29,0:28:53.94:0,54,462
chr10	13205797	.	T	TA	1916.74	PASS	AB=0.851;AC=36;AF=0.667;AN=54;BaseQRankSum=-5.319;DP=285;FS=1.766;HRun=13;HaplotypeScore=35.1699;InbreedingCoeff=0.3418;MQ=64.44;MQ0=5;MQRankSum=0.643;QD=8.19;ReadPosRankSum=-0.805;VQSLOD=1.3434;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:13:20.72:0,21,144	1/1:1,2:3:6.32:43,6,0	0/1:39,0:9:7.52:8,0,16	0/1:39,0:6:6.26:6,0,15	0/1:3,3:6:5.61:88,0,6	0/0:9,0:7:8.86:0,9,60	0/0:3,0:3:5.95:0,6,41	1/1:7,16:24:13.16:380,13,0	1/1:1,5:6:12.01:111,12,0	1/1:3,3:6:10.26:87,10,0	1/1:1,0:1:2.84:14,3,0	1/1:0,4:4:9.01:84,9,0	0/1:4,1:4:13.32:24,0,13	1/1:1,2:3:3:28,3,0	1/1:3,3:6:11.85:97,12,0	1/1:3,0:3:9:79,9,0	1/1:4,19:24:17.03:334,17,0	1/1:1,10:11:15.90:141,16,0	0/0:4,0:14:12.26:0,12,44	0/0:5,0:6:0.77:0,1,9	./.	0/1:4,0:4:2.15:22,0,2	1/1:0,1:1:3:28,3,0	1/1:0,2:2:6.01:56,6,0	0/0:4,0:4:11.90:0,12,82	1/1:3,10:13:18.02:167,18,0	1/1:0,2:2:3:28,3,0	0/1:10,19:29:37.28:261,0,37
chr10	13205799	.	A	ATT	252.40	PASS	AB=0.846;AC=3;AF=0.054;AN=56;BaseQRankSum=2.628;DP=287;FS=4.339;HRun=0;HaplotypeScore=45.6708;InbreedingCoeff=-0.0096;MQ=64.58;MQ0=5;MQRankSum=-1.832;QD=4.14;ReadPosRankSum=-2.002;VQSLOD=1.4026;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:13:33.03:0,33,487	0/0:3,0:3:5.81:0,6,52	0/0:39,0:9:2.16:0,2,105	0/1:40,0:7:4.59:5,0,57	0/0:7,0:7:15.03:0,15,184	0/0:7,0:5:12.04:0,12,188	0/0:3,0:3:6.02:0,6,98	0/0:25,0:25:69.11:0,69,873	0/0:6,0:6:15.05:0,15,196	0/0:8,0:8:17.97:0,18,224	0/0:1,0:1:3:0,3,26	0/0:4,0:4:11.99:0,12,135	0/0:4,0:3:8.94:0,9,103	0/0:3,0:3:6.02:0,6,84	0/0:6,0:6:14.98:0,15,179	0/0:3,0:3:9.01:0,9,88	0/0:25,0:24:54.06:0,54,627	0/0:11,0:11:20.97:0,21,230	0/1:14,0:15:23.15:163,0,23	0/1:2,4:6:23.08:176,0,23	0/0:3,0:3:0:0,0,0	0/0:4,0:4:9.03:0,9,116	0/0:1,0:1:3.01:0,3,38	0/0:2,0:2:6.01:0,6,67	0/0:4,0:4:12.04:0,12,196	0/0:12,0:12:30.09:0,30,387	0/0:2,0:2:6.02:0,6,79	0/0:29,0:29:63.20:0,63,856
chr10	13206950	.	C	CTGTGTGTG	1723.29	PASS	AB=0.703;AC=21;AF=0.375;AN=56;BaseQRankSum=-0.948;DP=738;FS=1.134;HRun=0;HaplotypeScore=228.5063;InbreedingCoeff=0.3496;MQ=71.14;MQ0=13;MQRankSum=-0.887;QD=4.49;ReadPosRankSum=-3.952;VQSLOD=1.9958;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:45,0:54:4.57:446,5,0	0/0:4,0:7:11.83:0,12,174	0/0:49,0:25:6.02:0,6,103	0/0:49,0:24:5.75:0,6,73	0/0:5,0:18:11.88:0,12,61	1/1:19,1:20:18.05:255,18,0	1/1:24,13:36:9.62:317,10,0	0/1:25,0:35:61.15:61,0,316	0/0:7,0:19:31.93:0,32,173	0/1:21,0:38:63.42:63,0,324	0/1:7,0:14:20.09:20,0,64	0/0:7,0:19:17.34:0,17,115	0/0:6,0:18:15.41:0,15,129	0/0:6,0:17:7.18:0,7,168	0/0:10,0:26:38.31:0,38,326	0/0:7,0:18:26.34:0,26,257	0/0:19,0:31:44.17:0,44,520	0/0:7,0:14:20.53:0,21,231	1/1:16,0:13:18.02:300,18,0	1/1:24,0:24:2.68:11,3,0	1/1:30,0:28:11.71:100,12,0	0/1:16,0:24:21.36:21,0,251	0/0:13,0:28:31.89:0,32,205	0/0:17,0:39:49.91:0,50,420	1/1:13,0:19:10.02:114,10,0	0/1:12,0:34:60.27:60,0,247	0/1:9,0:19:8.01:8,0,205	0/1:8,0:12:90.91:131,0,91
chr10	13206966	.	G	GCA	522.29	PASS	AB=0.894;AC=5;AF=0.089;AN=56;BaseQRankSum=-0.688;DP=784;FS=5.429;HRun=0;HaplotypeScore=157.9502;InbreedingCoeff=0.3438;MQ=50.11;MQ0=21;MQRankSum=-2.386;QD=4.62;ReadPosRankSum=-0.281;VQSLOD=2.8447;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:53:74.60:0,75,932	0/0:9,0:9:18.16:0,18,225	0/0:52,0:17:48.01:0,48,646	0/0:56,0:13:39.13:0,39,585	0/0:18,0:18:22.29:0,22,176	0/0:20,0:20:28.48:0,28,346	0/0:40,0:38:28.86:0,29,412	0/0:35,0:33:91.92:0,92,1150	0/1:18,0:19:5.99:6,0,136	0/0:40,0:39:95.77:0,96,1103	0/0:14,0:13:20.38:0,20,167	0/0:17,0:17:21.29:0,21,155	0/0:16,0:16:23.84:0,24,178	0/0:18,0:18:30.82:0,31,295	0/0:27,0:27:43.54:0,44,449	0/0:19,0:19:34.33:0,34,376	0/0:34,0:34:51.13:0,51,765	0/0:21,0:20:29.21:0,29,419	0/1:22,3:21:99:223,0,324	1/1:17,10:26:14.78:211,15,0	0/1:34,8:37:94.89:199,0,95	0/0:24,0:24:41.87:0,42,415	0/0:27,0:27:40.17:0,40,441	0/0:36,0:35:36.25:0,36,322	0/0:24,0:23:28.27:0,28,369	0/0:35,0:34:75.49:0,75,734	0/0:19,0:19:29.81:0,30,351	0/0:15,0:15:17.46:0,17,190
chr10	13206978	.	GCA	G	482.87	PASS	AB=0.902;AC=10;AF=0.179;AN=56;BaseQRankSum=3.411;DP=790;FS=12.076;HRun=0;HaplotypeScore=151.0378;InbreedingCoeff=-0.0247;MQ=47.18;MQ0=31;MQRankSum=1.555;QD=1.89;ReadPosRankSum=-2.912;VQSLOD=1.4604;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:47,4:49:99:127,0,650	0/0:9,0:9:21.07:0,21,312	0/0:59,0:15:38.57:0,39,505	0/0:70,1:15:43.40:0,43,426	0/0:22,0:21:43.31:0,43,491	0/1:16,6:22:99:173,0,196	0/1:32,4:35:1.19:1,0,540	0/0:36,1:33:52.17:0,52,1292	0/0:21,0:21:48.15:0,48,632	0/0:40,0:39:7.34:0,7,1266	0/0:13,0:12:32.89:0,33,427	0/1:14,1:15:23.70:24,0,320	0/0:17,0:17:42.95:0,43,515	0/0:18,1:19:47.49:0,47,562	0/0:29,0:29:48.69:0,49,893	0/0:17,0:17:38.71:0,39,518	0/0:28,1:29:49.93:0,50,1004	0/0:17,0:16:39.58:0,40,568	0/1:24,4:22:64.05:64,0,396	1/1:14,12:25:2.68:11,3,0	0/1:34,7:33:1.40:1,0,97	0/0:25,1:26:46.48:0,46,912	0/0:23,0:23:51.08:0,51,715	0/0:34,0:33:63.20:0,63,875	0/1:21,0:20:99:112,0,128	0/0:32,0:29:83.02:0,83,1141	0/0:19,0:19:12.54:0,13,650	0/1:14,1:15:99:99,0,218
chr10	13207004	.	A	ATG	1089.13	PASS	AB=0.826;AC=8;AF=0.143;AN=56;BaseQRankSum=-1.632;DP=823;FS=11.770;HRun=0;HaplotypeScore=149.2373;InbreedingCoeff=0.3408;MQ=48.44;MQ0=30;MQRankSum=0.662;QD=5.16;ReadPosRankSum=-2.395;VQSLOD=1.8299;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:35,18:50:72.08:780,0,72	0/0:13,0:13:24.07:0,24,280	0/0:50,0:14:1.07:0,1,94	0/0:69,0:14:9.03:0,9,104	0/0:23,0:23:50.93:0,51,559	0/0:18,0:18:24.07:0,24,282	0/0:36,0:38:65.18:0,65,675	0/1:34,1:32:28.46:28,0,446	0/0:21,0:21:36.11:0,36,423	0/0:32,0:34:60.51:0,61,680	0/0:15,0:16:29.74:0,30,300	0/0:15,0:16:19.05:0,19,263	0/0:17,0:17:36.11:0,36,424	0/0:19,0:19:45.13:0,45,522	0/0:25,0:26:47.97:0,48,540	0/0:18,0:21:41.29:0,41,406	0/0:38,0:38:72.19:0,72,832	0/0:23,0:22:34.50:0,34,417	1/1:30,0:27:11.63:80,12,0	1/1:29,0:28:16.47:72,16,0	0/0:56,0:49:14.61:0,15,73	0/0:29,0:29:54.29:0,54,593	0/0:25,0:25:33.09:0,33,385	0/1:41,0:41:10.97:11,0,542	0/1:6,15:21:33.98:260,0,34	0/0:26,0:25:47.93:0,48,509	0/0:14,0:14:24.05:0,24,267	0/0:10,0:10:6:0,6,71
chr10	13207006	.	G	GTGTGTGTA	1043.72	PASS	AB=0.859;AC=4;AF=0.071;AN=56;BaseQRankSum=-2.774;DP=823;FS=12.674;HRun=0;HaplotypeScore=221.5255;InbreedingCoeff=0.3733;MQ=48.72;MQ0=29;MQRankSum=-4.480;QD=7.79;ReadPosRankSum=-4.647;VQSLOD=0.5084;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:50:66.27:0,66,701	0/0:13,0:13:33.07:0,33,590	0/0:44,0:10:15.47:0,15,237	0/0:68,0:14:23.88:0,24,289	0/0:24,0:23:53.38:0,53,1107	0/0:19,0:18:24.08:0,24,620	0/0:39,0:38:32.26:0,32,1431	0/1:38,0:33:94.07:94,0,844	0/0:22,0:22:51.10:0,51,912	0/0:33,0:33:39.53:0,40,1478	0/0:17,0:16:20.45:0,20,688	0/0:16,0:16:3.62:0,4,532	0/0:17,0:17:48.09:0,48,934	0/0:19,0:19:48.15:0,48,1043	0/0:26,0:26:60.05:0,60,1241	0/0:22,0:22:21.37:0,21,877	0/0:36,0:36:85.44:0,85,1740	0/0:22,0:21:44.30:0,44,834	0/1:20,12:30:66.45:715,0,66	0/0:11,16:30:0.37:0,0,1	1/1:62,1:52:6.62:340,7,0	0/0:31,0:29:56.18:0,56,1354	0/0:25,0:25:47.94:0,48,847	0/0:43,0:43:64.69:0,65,1286	0/0:20,0:20:23.81:0,24,252	0/0:25,0:23:56.48:0,56,1043	0/0:14,0:14:39:0,39,661	0/0:10,0:10:16.99:0,17,234
chr10	13207126	.	G	GTT	2534.87	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-8.838;DP=639;FS=6.763;HRun=7;HaplotypeScore=76.3947;InbreedingCoeff=0.9602;MQ=79.52;MQ0=0;MQRankSum=1.111;QD=36.74;ReadPosRankSum=0.150;VQSLOD=3.1672;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,114,1314	0/0:18,0:18:48.14:0,48,558	0/0:16,0:16:25.87:0,26,279	0/0:20,0:19:18.05:0,18,291	0/0:34,0:34:90.24:0,90,1036	0/0:22,0:22:54.15:0,54,627	0/0:25,0:25:60.14:0,60,677	0/0:29,0:28:66.19:0,66,769	0/0:13,0:13:33.07:0,33,373	0/0:30,0:30:84.25:0,84,977	0/0:31,0:31:84.24:0,84,979	0/0:21,0:21:54.13:0,54,608	0/0:20,0:20:54.15:0,54,629	0/0:19,0:19:54.16:0,54,628	0/0:24,0:24:66.17:0,66,748	0/0:18,0:18:51.14:0,51,594	0/0:27,0:27:75.22:0,75,872	0/0:11,0:11:30.08:0,30,350	1/1:5,13:18:39.08:601,39,0	1/1:2,23:25:69.24:1116,69,0	1/1:6,19:25:60.19:961,60,0	0/0:29,0:29:72.15:0,72,824	0/0:27,0:27:75.22:0,75,873	0/0:26,0:25:60.16:0,60,699	0/0:25,0:25:69.19:0,69,802	0/0:19,0:19:54.14:0,54,615	0/0:19,0:19:48.09:0,48,536	0/0:4,0:4:6.01:0,6,70
chr10	13207380	.	GT	G	2161.08	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.562;DP=677;FS=1.492;HRun=6;HaplotypeScore=65.2428;InbreedingCoeff=0.9633;MQ=85.12;MQ0=0;MQRankSum=-1.794;QD=25.42;ReadPosRankSum=-0.953;VQSLOD=3.3964;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,126,1639	0/0:13,0:13:39.13:0,39,513	0/0:29,0:29:84.01:0,84,1064	0/0:29,0:29:71.66:0,72,877	0/0:27,0:27:78.22:0,78,1008	0/0:19,0:19:51.17:0,51,671	0/0:20,0:20:60.20:0,60,789	0/0:26,0:26:66.21:0,66,868	0/0:24,0:24:63.20:0,63,829	0/0:23,0:23:66.20:0,66,847	0/0:26,0:26:78.10:0,78,976	0/0:26,0:26:78.25:0,78,1024	0/0:27,0:27:78.25:0,78,1026	0/0:25,0:25:72.23:0,72,947	0/0:36,0:36:99:0,108,1393	0/0:15,0:15:45.15:0,45,592	0/0:35,0:35:99:0,105,1351	0/0:17,0:17:48.16:0,48,632	1/1:2,16:18:48.09:499,48,0	1/1:1,30:31:84.21:902,84,0	1/1:4,32:36:84.21:903,84,0	0/0:25,0:25:75.23:0,75,963	0/0:18,0:18:54.17:0,54,705	0/0:31,0:31:87.28:0,87,1145	0/0:14,0:14:27.09:0,27,355	0/0:22,0:22:63.20:0,63,828	0/0:19,0:19:57.19:0,57,750	0/0:2,0:2:6.02:0,6,79
chr10	13208483	.	GA	G	96.08	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=3.396;DP=600;FS=1.628;HRun=1;HaplotypeScore=67.3507;InbreedingCoeff=0.8906;MQ=72.70;MQ0=3;MQRankSum=-2.925;QD=7.39;ReadPosRankSum=-0.199;VQSLOD=0.6243;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,102,1525	0/0:8,0:8:21.07:0,21,335	0/0:26,0:26:74.44:0,74,1078	0/0:19,0:19:54.13:0,54,793	0/0:20,0:20:54.18:0,54,862	1/1:0,5:1:3.01:33,3,0	1/1:0,8:6:15.04:167,15,0	0/0:29,0:29:87.26:0,87,1288	0/0:24,0:24:57.15:0,57,861	0/0:27,0:27:78.25:0,78,1204	0/0:19,0:19:57.05:0,57,774	0/0:19,0:19:57.19:0,57,901	0/0:15,0:15:42.13:0,42,642	0/0:23,0:23:66.22:0,66,1048	0/0:21,0:21:63.17:0,63,972	0/0:19,0:19:54.18:0,54,858	0/0:34,0:34:99:0,99,1521	0/0:21,0:21:63.21:0,63,1005	0/0:11,0:10:29.52:0,30,188	0/0:20,0:20:56.24:0,56,375	0/0:40,0:40:99:0,115,778	0/0:19,0:19:57.15:0,57,848	0/0:13,0:13:36.12:0,36,574	0/0:33,0:33:96.29:0,96,1479	0/0:27,0:27:78.25:0,78,1218	0/0:27,0:27:81.27:0,81,1272	0/0:18,0:18:54.18:0,54,854	0/0:17,0:17:48.16:0,48,745
chr10	13210588	.	AT	A	1209.53	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.580;DP=550;FS=15.230;HRun=4;HaplotypeScore=61.7757;InbreedingCoeff=0.9852;MQ=76.24;MQ0=0;MQRankSum=-3.072;QD=28.13;ReadPosRankSum=0.784;VQSLOD=1.9649;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:93.30:0,93,1278	0/0:13,0:13:39.12:0,39,522	0/0:16,0:17:12.94:0,13,441	0/0:9,0:9:27.07:0,27,331	0/0:27,0:27:78.23:0,78,1058	1/1:3,23:26:69.21:827,69,0	1/1:1,16:17:42.13:504,42,0	0/0:38,0:38:99:0,108,1460	0/0:19,0:19:54.15:0,54,729	0/0:25,0:25:72.24:0,72,1004	0/0:24,0:24:69.23:0,69,963	0/0:18,0:18:54.17:0,54,734	0/0:12,0:12:36.12:0,36,502	0/0:19,0:19:57.19:0,57,798	0/0:19,0:19:51.17:0,51,697	0/0:11,0:11:33.11:0,33,461	0/0:24,0:24:69.23:0,69,962	0/0:39,0:39:99:0,111,1528	0/0:18,0:18:48.15:0,48,647	0/0:22,0:22:63.20:0,63,866	0/0:13,0:13:36.12:0,36,503	0/0:15,0:15:45.15:0,45,629	0/0:9,0:9:27.09:0,27,378	0/0:12,0:12:36.09:0,36,468	0/0:23,0:23:69.23:0,69,957	0/0:19,0:19:54.18:0,54,753	0/0:22,0:22:66.22:0,66,924	0/0:9,0:9:27.09:0,27,378
chr10	13210646	.	TAG	T	2236.41	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=5.937;DP=526;FS=0.000;HRun=0;HaplotypeScore=85.6631;InbreedingCoeff=0.9987;MQ=73.84;MQ0=0;MQRankSum=-2.035;QD=37.91;ReadPosRankSum=0.874;VQSLOD=5.4913;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,105,1966	0/0:13,0:13:39.13:0,39,719	0/0:19,0:19:56.93:0,57,1007	0/0:16,0:16:42.14:0,42,743	0/0:14,0:14:39.13:0,39,731	0/0:19,0:19:54.19:0,54,1011	0/0:17,0:17:48.16:0,48,899	0/0:27,0:27:78.26:0,78,1432	0/0:17,0:17:51.17:0,51,955	0/0:22,0:22:60.20:0,60,1093	0/0:20,0:20:54.19:0,54,1010	0/0:13,0:13:39.13:0,39,723	0/0:14,0:14:42.14:0,42,780	0/0:13,0:13:36.12:0,36,674	0/0:23,0:23:69.24:0,69,1292	0/0:19,0:19:57.20:0,57,1062	0/0:17,0:17:51.17:0,51,955	0/0:30,0:30:90.31:0,90,1685	1/1:1,16:17:48.11:663,48,0	1/1:0,14:14:39.13:567,39,0	1/1:0,28:28:78.26:1149,78,0	0/0:18,0:18:54.19:0,54,1011	0/0:8,0:8:24.08:0,24,449	0/0:21,0:21:63.20:0,63,1148	0/0:25,0:25:75.26:0,75,1405	0/0:16,0:16:45.15:0,45,843	0/0:18,0:18:51.16:0,51,916	0/0:12,0:12:27.09:0,27,506
chr10	13211072	.	CAAG	C	2100.69	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.497;DP=708;FS=14.506;HRun=0;HaplotypeScore=97.8245;InbreedingCoeff=0.9998;MQ=86.43;MQ0=0;MQRankSum=-2.156;QD=40.40;ReadPosRankSum=-0.258;VQSLOD=3.9856;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:96.33:0,96,2224	0/0:12,0:12:36.12:0,36,851	0/0:23,0:23:60.10:0,60,1153	0/0:23,0:23:56.80:0,57,1106	0/0:36,0:36:99:0,108,2490	1/1:0,16:16:39.13:688,39,0	1/1:1,35:35:87.30:1534,87,0	0/0:29,0:29:84.29:0,84,1992	0/0:17,0:17:51.18:0,51,1206	0/0:41,0:41:99:0,120,2774	0/0:17,0:17:51.18:0,51,1206	0/0:17,0:17:51.18:0,51,1206	0/0:19,0:19:57.20:0,57,1348	0/0:25,0:25:75.26:0,75,1752	0/0:12,0:12:36.12:0,36,810	0/0:24,0:24:72.23:0,72,1657	0/0:27,0:27:81.28:0,81,1916	0/0:28,0:28:81.19:0,81,1813	0/0:15,0:15:42.14:0,42,993	0/0:34,0:34:99:0,102,2366	0/0:26,0:26:78.25:0,78,1774	0/0:35,0:35:99:0,102,2414	0/0:32,0:32:96.33:0,96,2249	0/0:22,0:21:66.23:0,66,1561	0/0:24,0:24:66.23:0,66,1562	0/0:41,0:41:99:0,114,2692	0/0:28,0:28:84.29:0,84,1944	0/0:17,0:17:51.18:0,51,1206
chr10	13212066	.	T	TG	6329.57	PASS	AB=0.639;AC=36;AF=0.643;AN=56;BaseQRankSum=-3.510;DP=558;FS=6.606;HRun=9;HaplotypeScore=83.9269;InbreedingCoeff=0.2999;MQ=82.01;MQ0=0;MQRankSum=-0.590;QD=14.39;ReadPosRankSum=1.070;VQSLOD=4.8884;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:59.93:0,60,513	0/1:3,8:11:25.04:203,0,25	0/0:22,0:21:25.26:0,25,192	0/0:15,0:14:8.94:0,9,101	1/1:7,24:31:60.12:648,60,0	0/0:11,0:11:26.95:0,27,234	0/0:19,0:19:38.99:0,39,339	0/1:13,6:19:34.03:101,0,34	0/1:6,12:18:21.54:236,0,22	0/1:12,14:26:15.36:296,0,15	0/1:10,14:24:29.93:365,0,30	1/1:4,6:10:15.04:166,15,0	1/1:6,12:18:21.06:232,21,0	1/1:4,10:14:1.90:241,2,0	1/1:8,18:26:42.11:465,42,0	1/1:3,7:10:21:218,21,0	1/1:10,23:33:2.04:479,2,0	0/1:5,10:15:19.02:264,0,19	1/1:5,2:13:17.29:97,17,0	1/1:13,0:28:37.75:236,38,0	1/1:10,0:14:5.68:29,6,0	0/1:8,7:15:31.05:145,0,31	1/1:6,18:24:41.90:464,42,0	0/1:11,19:30:36.05:323,0,36	0/0:26,0:27:56:0,56,475	1/1:4,15:19:39.09:421,39,0	1/1:9,19:28:31.10:569,31,0	1/1:4,10:14:12.03:133,12,0
chr10	13212757	.	GA	G	1586.50	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=2.875;DP=578;FS=1.124;HRun=6;HaplotypeScore=93.8388;InbreedingCoeff=0.9901;MQ=71.34;MQ0=0;MQRankSum=-0.187;QD=25.59;ReadPosRankSum=0.740;VQSLOD=3.5121;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,108,1388	0/0:9,0:9:24.08:0,24,316	0/0:11,0:11:30.06:0,30,360	0/0:13,0:13:26.94:0,27,317	0/0:29,0:29:84.27:0,84,1105	0/0:21,0:21:60.18:0,60,774	0/0:13,0:13:39.12:0,39,500	0/0:30,0:30:84.26:0,84,1082	0/0:19,0:19:57.19:0,57,750	0/0:27,0:27:75.24:0,75,985	0/0:30,0:30:78.25:0,78,1025	0/0:14,0:14:42.14:0,42,553	0/0:6,0:6:18.06:0,18,237	0/0:18,0:18:48.11:0,48,588	0/0:13,0:13:36.11:0,36,461	0/0:15,0:15:45.14:0,45,578	0/0:31,0:31:92.41:0,92,1112	0/0:26,0:26:72.22:0,72,932	1/1:2,16:18:45.08:474,45,0	1/1:3,27:30:78.19:837,78,0	1/1:0,14:14:39.10:419,39,0	0/0:21,0:21:54.17:0,54,696	0/0:19,0:19:54.18:0,54,710	0/0:21,0:21:60.20:0,60,790	0/0:27,0:27:75.22:0,75,959	0/0:31,0:31:84.26:0,84,1081	0/0:29,0:28:81.26:0,81,1065	0/0:6,0:6:15.05:0,15,197
chr10	13213920	.	C	CA	1756.52	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-9.161;DP=659;FS=1.258;HRun=2;HaplotypeScore=63.1974;InbreedingCoeff=0.9843;MQ=81.98;MQ0=0;MQRankSum=-1.199;QD=41.82;ReadPosRankSum=0.284;VQSLOD=3.5400;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,150,1914	0/0:5,0:5:12.04:0,12,155	0/0:25,0:25:52.14:0,52,752	0/0:17,0:17:47.08:0,47,567	0/0:22,0:22:66.20:0,66,843	1/1:0,23:23:69.23:1034,69,0	1/1:0,19:19:57.19:844,57,0	0/0:35,0:35:99:0,105,1340	0/0:21,0:21:54.14:0,54,672	0/0:25,0:25:75.23:0,75,961	0/0:23,0:23:69.18:0,69,863	0/0:17,0:17:48.16:0,48,623	0/0:15,0:15:45.15:0,45,584	0/0:17,0:17:48.16:0,48,622	0/0:27,0:27:81.25:0,81,1037	0/0:19,0:19:57.19:0,57,740	0/0:29,0:29:87.26:0,87,1112	0/0:23,0:23:69.22:0,69,896	0/0:23,0:23:66.21:0,66,857	0/0:26,0:26:78.21:0,78,970	0/0:31,0:31:93.27:0,93,1178	0/0:15,0:15:45.15:0,45,584	0/0:29,0:29:84.26:0,84,1073	0/0:33,0:33:96.24:0,96,1195	0/0:24,0:24:72.23:0,72,935	0/0:32,0:32:93.30:0,93,1208	0/0:15,0:15:42.14:0,42,545	0/0:17,0:17:51.17:0,51,662
chr10	13215813	.	CTGTGCA	C	30903.15	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=7.361;DP=1144;FS=6.640;HRun=0;HaplotypeScore=363.6879;InbreedingCoeff=0.9485;MQ=46.77;MQ0=43;MQRankSum=-18.138;QD=43.10;ReadPosRankSum=-5.542;VQSLOD=3.0861;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:69,0:69:99:0,196,6089	1/1:1,19:20:45.14:1048,45,0	0/0:31,0:2:3.01:0,3,38	0/0:29,0:13:24.07:0,24,471	1/1:3,18:20:14.32:349,14,0	0/0:21,0:17:36.12:0,36,1253	0/0:34,0:23:57.15:0,57,1524	1/1:4,25:26:63.20:1326,63,0	1/1:4,53:57:99:2561,111,0	1/1:4,62:66:99:3922,186,0	1/1:0,23:23:23.77:559,24,0	1/1:3,45:48:96.33:2230,96,0	1/1:2,37:39:75.26:1746,75,0	1/1:3,51:54:99:2373,102,0	1/1:4,43:47:90.31:2090,90,0	1/1:3,50:53:99:2516,108,0	1/1:8,14:22:41.76:868,42,0	1/1:1,8:9:12.04:280,12,0	0/0:22,0:20:57.18:0,57,1655	0/0:40,0:40:99:0,114,3162	0/0:153,0:150:99:0,412,11557	1/1:2,40:43:78.01:1816,78,0	1/1:1,26:27:45.03:1048,45,0	1/1:2,40:42:8.12:209,8,0	0/0:27,0:27:75.26:0,75,2573	1/1:3,61:63:99:3605,174,0	1/1:3,37:41:90:2079,90,0	1/1:3,9:12:12.04:280,12,0
chr10	13215827	.	ATG	A	6721.73	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-9.492;DP=1181;FS=0.000;HRun=0;HaplotypeScore=406.7043;InbreedingCoeff=0.9581;MQ=46.03;MQ0=47;MQRankSum=13.838;QD=31.26;ReadPosRankSum=5.882;VQSLOD=2.8399;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:60,0:60:99:0,160,2655	0/0:25,0:25:59.53:0,60,487	0/0:41,1:5:12.04:0,12,184	0/0:27,0:10:15.04:0,15,222	0/0:22,0:21:23.69:0,24,214	0/0:21,0:18:42.13:0,42,684	0/0:31,0:21:42.14:0,42,667	0/0:33,0:30:78.01:0,78,914	0/0:57,0:57:99:0,124,932	0/0:72,0:72:99:0,192,1907	0/0:27,0:27:35.45:0,35,278	0/0:56,0:56:99:0,122,1067	0/0:41,0:41:82.32:0,82,637	0/0:55,0:55:99:0,117,827	0/0:52,0:52:99:0,122,1058	0/0:56,0:56:99:0,125,916	0/0:21,0:21:36.62:0,37,342	0/0:10,0:10:17.93:0,18,164	1/1:3,21:21:57.15:722,57,0	1/1:5,35:40:93.30:1219,93,0	1/1:38,112:146:99:4781,371,0	0/0:45,0:45:82.75:0,83,537	0/0:27,0:27:47.02:0,47,301	0/0:41,0:41:11.80:0,12,103	0/0:30,0:30:78.25:0,78,1302	0/0:68,0:66:99:0,179,1694	0/0:39,0:39:81.86:0,82,569	0/0:7,0:7:11.95:0,12,91
chr10	13215847	.	A	ATG	1066.66	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=-5.512;DP=1224;FS=0.000;HRun=0;HaplotypeScore=408.8117;InbreedingCoeff=0.7800;MQ=48.81;MQ0=26;MQRankSum=1.901;QD=15.02;ReadPosRankSum=0.056;VQSLOD=2.8120;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:58:99:0,150,1969	0/0:25,0:25:48.16:0,48,631	0/0:39,0:11:31.34:0,31,392	0/0:34,0:19:47.97:0,48,559	0/0:24,0:23:32.94:0,33,433	1/1:5,25:24:42.14:720,42,0	1/1:5,21:17:26.90:462,27,0	0/0:46,0:44:99:0,117,1488	0/0:60,0:60:99:0,120,1577	0/0:76,0:76:99:0,211,2727	0/0:25,0:25:26.83:0,27,354	0/0:59,0:59:99:0,111,1424	0/0:42,0:42:72.23:0,72,945	0/0:52,0:52:81.24:0,81,1045	0/0:51,0:51:96.31:0,96,1261	0/0:48,0:48:96.31:0,96,1261	0/0:28,0:28:38.70:0,39,511	0/1:14,0:14:12.71:13,0,379	0/0:31,0:28:69.22:0,69,905	0/0:40,0:40:93.29:0,93,1206	0/0:151,0:148:99:0,357,4560	0/0:46,0:46:60.02:0,60,767	0/0:26,0:26:20.69:0,21,245	0/0:36,0:36:15.01:0,15,197	0/0:36,0:36:90.29:0,90,1182	0/0:70,0:69:99:0,193,2500	0/0:39,0:39:60.19:0,60,786	0/0:11,0:11:21.07:0,21,270
chr10	13215977	.	ATG	A	5543.25	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=7.646;DP=1293;FS=1.427;HRun=0;HaplotypeScore=226.5358;InbreedingCoeff=0.9999;MQ=56.57;MQ0=9;MQRankSum=2.689;QD=29.17;ReadPosRankSum=2.980;VQSLOD=5.6477;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,1:47:99:0,132,2234	0/0:17,0:17:51.17:0,51,854	0/0:47,0:24:45.02:0,45,697	0/0:42,0:22:32.76:0,33,509	0/0:36,0:36:93.27:0,93,1520	0/0:24,0:18:48.11:0,48,759	0/0:32,0:24:70.77:0,71,1143	0/0:37,0:36:96.30:0,96,1552	0/0:62,0:62:99:0,159,2618	0/0:89,0:89:99:0,217,3567	0/0:28,0:28:78.27:0,78,1314	0/0:70,0:70:99:0,165,2740	0/0:38,0:38:84.25:0,84,1371	0/0:70,0:70:99:0,138,2273	0/0:49,0:49:99:0,108,1749	0/0:53,0:53:99:0,144,2354	0/0:32,0:32:80.26:0,80,1238	0/0:43,0:43:99:0,126,2078	1/1:3,15:17:42.10:515,42,0	1/1:10,34:43:78.25:1014,78,0	1/1:30,98:125:99:4014,304,0	0/0:48,0:48:99:0,132,2198	0/0:23,0:23:66.18:0,66,1057	0/0:45,0:45:99:0,99,1603	0/0:35,0:35:93.32:0,93,1571	0/0:65,0:65:99:0,175,2890	0/0:40,0:40:99:0,99,1672	0/0:28,0:28:78.27:0,78,1298
chr10	13216103	.	G	GTGTGTGCC	55.73	PASS	AB=0.963;AC=3;AF=0.056;AN=54;BaseQRankSum=2.986;DP=1349;FS=9.423;HRun=0;HaplotypeScore=336.7857;InbreedingCoeff=0.3653;MQ=50.06;MQ0=122;MQRankSum=-2.710;QD=0.91;ReadPosRankSum=0.668;VQSLOD=1.1210;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:62,0:57:99:0,153,3638	0/0:21,0:20:39.13:0,39,971	0/0:38,0:1:3.01:0,3,33	0/0:47,0:1:3:0,3,27	0/0:34,0:30:57.09:0,57,1429	./.	1/1:7,25:20:3.01:129,3,0	0/0:52,0:35:84.24:0,84,1766	0/0:65,0:61:99:0,163,4047	0/0:85,0:67:99:0,190,4811	0/0:36,0:35:87.30:0,87,2243	0/0:65,0:64:99:0,162,4078	0/0:37,0:36:99:0,105,2681	0/0:60,0:58:99:0,151,3873	0/0:52,0:50:99:0,117,2954	0/0:35,0:35:87.28:0,87,2258	0/0:40,0:39:90.31:0,90,2253	0/0:34,0:32:81.28:0,81,2099	0/0:33,0:19:45.15:0,45,1095	0/0:54,0:48:99:0,126,2960	0/0:130,0:117:99:0,262,6202	0/0:56,0:52:99:0,135,3486	0/0:29,0:28:58.20:0,58,1532	0/0:64,0:63:99:0,143,3539	0/0:34,0:32:84.29:0,84,2065	0/0:73,0:63:99:0,166,4313	0/0:36,0:35:93.30:0,93,2285	0/1:25,0:23:15.27:15,0,942
chr10	13216299	.	GCA	G	1476.36	PASS	AB=0.785;AC=4;AF=0.071;AN=56;BaseQRankSum=10.050;DP=1248;FS=4.269;HRun=0;HaplotypeScore=197.6501;InbreedingCoeff=-0.0757;MQ=55.78;MQ0=17;MQRankSum=-4.586;QD=8.02;ReadPosRankSum=-1.847;VQSLOD=2.7117;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:59,0:59:99:0,171,3315	0/0:19,0:19:54.19:0,54,1096	0/0:28,0:17:9.45:0,9,436	0/0:45,0:18:47.14:0,47,643	0/0:35,0:34:99:0,102,1997	0/0:24,0:23:47.89:0,48,930	0/0:59,0:51:99:0,132,2556	0/0:48,0:47:99:0,130,2663	0/0:67,0:67:99:0,193,3888	0/0:91,0:91:99:0,271,5231	0/0:35,0:35:99:0,102,2017	0/0:56,0:56:99:0,166,3135	0/0:46,0:46:99:0,138,2771	0/0:56,0:56:99:0,163,3204	0/0:57,0:57:99:0,172,3471	0/0:38,0:38:99:0,111,2207	0/0:29,0:30:84.06:0,84,1587	0/1:34,3:37:7.18:7,0,1754	0/1:19,5:14:99:142,0,562	0/1:21,24:45:99:864,0,856	0/1:50,28:71:99:569,0,1946	0/0:49,0:49:99:0,148,2896	0/0:27,0:27:78.12:0,78,1548	0/0:43,0:43:99:0,123,2417	0/0:38,0:37:99:0,111,2190	0/0:54,0:54:99:0,160,3142	0/0:30,0:30:90.28:0,90,1735	0/0:27,0:30:81.19:0,81,1390
chr10	13216405	.	ATG	A	26795.47	PASS	AB=0.590;AC=37;AF=0.685;AN=54;BaseQRankSum=8.604;DP=1321;FS=15.449;HRun=0;HaplotypeScore=207.1652;InbreedingCoeff=0.8265;MQ=54.42;MQ0=96;MQRankSum=3.165;QD=30.41;ReadPosRankSum=5.392;VQSLOD=4.9733;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:55:99:0,144,2447	1/1:2,13:15:26.71:354,27,0	0/0:56,0:4:5.06:0,5,21	0/0:43,0:7:2.99:0,3,23	1/1:3,34:37:90.29:1181,90,0	./.	0/0:9,1:8:3.42:0,3,146	1/1:9,33:41:61.46:1128,61,0	1/1:9,64:73:99:2181,167,0	1/1:7,79:83:99:2883,226,0	1/1:3,30:33:72.23:945,72,0	1/1:3,67:67:99:2206,169,0	1/1:2,40:42:96.21:1260,96,0	1/1:4,49:53:99:1615,123,0	1/1:4,52:56:99:1733,132,0	1/1:3,43:45:99:1457,111,0	1/1:7,41:47:99:1588,120,0	0/1:14,32:45:33.54:1270,0,34	0/0:23,0:18:16.70:0,17,522	0/0:49,0:49:99:0,126,1919	0/0:162,0:161:99:0,403,6258	1/1:2,44:46:99:1339,102,0	1/1:2,29:31:78.25:1024,78,0	1/1:8,50:58:99:1615,123,0	0/0:38,0:37:99:0,102,1721	1/1:7,50:54:99:1835,141,0	1/1:3,26:29:78.25:1023,78,0	1/1:9,4:13:12.04:158,12,0
chr10	13216425	.	A	ATG	3464.80	PASS	AB=0.847;AC=6;AF=0.107;AN=56;BaseQRankSum=-1.373;DP=1375;FS=1.257;HRun=0;HaplotypeScore=303.8512;InbreedingCoeff=0.2004;MQ=54.90;MQ0=67;MQRankSum=-2.697;QD=10.66;ReadPosRankSum=-6.516;VQSLOD=1.6649;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:55:99:0,120,1499	0/0:14,0:14:29.86:0,30,357	0/0:46,0:6:0.88:0,1,102	0/0:37,0:2:6.02:0,6,76	0/0:36,0:36:87.28:0,87,1117	1/1:6,0:6:17.31:107,17,0	0/1:16,0:15:54.67:83,0,55	0/0:42,0:40:99:0,105,1308	0/0:62,0:62:99:0,150,1862	0/0:85,0:82:99:0,214,2691	0/0:33,0:34:84.26:0,84,1063	0/0:74,0:74:99:0,163,2068	0/0:46,0:45:93.27:0,93,1168	0/0:55,0:55:99:0,117,1448	0/0:62,0:61:99:0,156,1947	0/0:40,0:40:81.26:0,81,1035	0/0:48,0:48:99:0,114,1441	0/0:44,1:45:78.47:0,78,1178	0/1:22,8:23:99:157,0,333	0/1:45,17:62:99:899,0,1096	0/1:163,48:205:99:2219,0,3585	0/0:48,0:48:99:0,120,1495	0/0:32,0:32:75.22:0,75,961	0/0:60,1:60:99:0,117,1486	0/0:39,0:38:96.27:0,96,1203	0/0:54,0:52:70.07:0,70,1431	0/0:28,0:28:69.21:0,69,872	0/0:6,0:6:18.06:0,18,232
chr10	13216435	.	G	GCA	755.54	PASS	AB=0.731;AC=3;AF=0.054;AN=56;BaseQRankSum=8.257;DP=1347;FS=11.766;HRun=0;HaplotypeScore=296.8755;InbreedingCoeff=0.6208;MQ=55.12;MQ0=47;MQRankSum=-7.680;QD=30.22;ReadPosRankSum=-1.576;VQSLOD=1.7774;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:49:99:0,117,1694	0/0:16,0:16:32.90:0,33,481	0/0:36,0:8:18.03:0,18,211	0/0:37,0:5:11.87:0,12,144	0/0:31,0:31:87.25:0,87,1221	1/1:1,5:6:18.06:336,18,0	0/1:12,7:18:49.35:523,0,49	0/0:46,0:44:99:0,129,1809	0/0:60,0:60:99:0,150,2131	0/0:79,0:76:99:0,223,3262	0/0:30,0:30:84.28:0,84,1235	0/0:69,0:69:99:0,175,2527	0/0:45,0:44:99:0,105,1521	0/0:56,0:56:99:0,135,1953	0/0:63,0:62:99:0,172,2484	0/0:36,0:36:90.28:0,90,1282	0/0:46,0:46:99:0,126,1804	0/0:41,0:42:96:0,96,1469	0/0:35,0:29:50.33:0,50,806	0/0:63,0:63:55.45:0,55,1572	0/0:227,0:221:99:0,288,5880	0/0:46,0:46:99:0,129,1887	0/0:30,0:30:75.22:0,75,1079	0/0:57,0:56:99:0,138,2002	0/0:39,0:38:99:0,105,1503	0/0:52,0:50:99:0,138,2000	0/0:24,0:24:72.24:0,72,1057	0/0:7,0:7:21.07:0,21,294
chr10	13216457	.	C	CTG	4298.19	PASS	AB=0.586;AC=7;AF=0.125;AN=56;BaseQRankSum=-6.313;DP=1411;DS;FS=10.653;HRun=0;HaplotypeScore=277.6946;InbreedingCoeff=0.8319;MQ=58.23;MQ0=9;MQRankSum=-0.208;QD=32.81;ReadPosRankSum=-0.490;VQSLOD=2.9036;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:15,30:44:19.40:1533,19,0	0/0:19,0:19:35.88:0,36,442	0/0:28,0:17:38.09:0,38,483	0/0:39,0:15:18.62:0,19,319	0/0:25,0:25:57.18:0,57,725	1/1:0,12:13:30.10:501,30,0	0/1:10,24:34:70.80:1059,0,71	0/0:43,0:42:99:0,99,1218	0/0:58,0:58:99:0,118,1571	0/0:90,0:90:99:0,205,2557	0/0:26,0:26:63.20:0,63,802	0/0:76,0:76:99:0,156,1960	0/0:46,0:45:96.31:0,96,1221	0/0:67,0:67:99:0,147,1824	0/0:62,0:62:99:0,144,1765	0/0:45,0:45:99:0,102,1272	0/0:46,0:46:99:0,111,1413	0/0:37,0:37:72.03:0,72,890	0/0:41,0:38:78.25:0,78,990	0/0:69,0:69:99:0,159,1967	0/0:250,0:243:99:0,593,7433	0/0:46,0:46:99:0,102,1283	0/0:23,0:23:54.17:0,54,686	0/0:58,0:56:99:0,126,1604	1/1:10,29:38:72.25:1205,72,0	0/0:48,0:47:99:0,123,1566	0/0:30,0:30:72.22:0,72,905	0/0:8,0:8:24.08:0,24,306
chr10	13216595	.	G	GTGTGTGCA	2048.76	PASS	AB=0.912;AC=5;AF=0.089;AN=56;BaseQRankSum=-0.716;DP=1272;FS=8.100;HRun=0;HaplotypeScore=345.9680;InbreedingCoeff=0.7630;MQ=54.34;MQ0=56;MQRankSum=-4.410;QD=13.30;ReadPosRankSum=-5.032;VQSLOD=0.6702;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:59,0:59:99:0,101,2505	0/0:18,0:18:51.13:0,51,1184	0/0:53,0:12:33.97:0,34,602	0/0:71,0:21:54.18:0,54,1101	0/0:42,0:42:99:0,102,2442	0/0:24,0:24:54.19:0,54,1259	0/0:44,0:39:78.27:0,78,1779	0/0:41,0:41:84.27:0,84,1813	0/0:61,0:61:99:0,129,3041	0/0:62,0:62:99:0,154,3802	0/0:30,0:30:66.20:0,66,1556	0/0:59,0:59:99:0,126,3111	0/0:43,0:43:99:0,111,2690	0/0:55,0:55:99:0,135,3291	0/0:63,0:63:99:0,148,3684	0/0:41,0:41:99:0,102,2449	0/0:41,0:40:92.44:0,92,2209	0/0:29,0:30:54.02:0,54,1230	1/1:12,7:15:27.09:875,27,0	1/1:21,10:31:11.64:287,12,0	0/1:93,8:101:99:1012,0,125	0/0:43,0:43:84.24:0,84,1904	0/0:30,0:30:60.21:0,60,1527	0/0:52,0:52:96.08:0,96,2396	0/0:36,0:36:84.19:0,84,2046	0/0:61,0:60:99:0,126,3072	0/0:37,0:37:66.23:0,66,1704	0/0:22,0:22:45.15:0,45,1059
chr10	13220822	.	ATG	A	271.64	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=6.540;DP=747;FS=7.380;HRun=0;HaplotypeScore=203.0777;InbreedingCoeff=0.7302;MQ=59.78;MQ0=12;MQRankSum=-5.891;QD=4.31;ReadPosRankSum=-0.224;VQSLOD=2.2260;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:42,1:43:14.33:0,14,299	0/0:9,0:9:20.69:0,21,248	0/0:48,2:23:18.34:0,18,517	0/0:57,0:34:60.16:0,60,920	0/0:19,0:20:35.66:0,36,507	1/1:14,0:14:14.63:86,15,0	1/1:8,10:17:20.91:250,21,0	0/0:35,0:33:74.93:0,75,959	0/0:21,0:21:45.34:0,45,335	0/0:33,0:32:76.97:0,77,782	0/0:21,0:21:37.56:0,38,381	0/0:24,0:24:66.92:0,67,672	0/0:22,0:22:42.95:0,43,437	0/0:25,0:24:53.06:0,53,585	0/0:30,0:30:62.03:0,62,756	0/0:26,0:26:47.43:0,47,562	0/0:29,0:29:68.76:0,69,917	0/0:28,0:28:30.80:0,31,614	0/0:26,0:26:8.06:0,8,364	0/1:31,0:31:56.94:62,0,57	0/0:32,0:31:39.12:0,39,567	0/0:25,0:25:50.28:0,50,610	0/0:24,0:24:51.17:0,51,774	0/0:29,0:29:69.23:0,69,1090	0/0:20,0:20:28.69:0,29,199	0/0:24,0:24:58.73:0,59,554	0/0:24,0:24:61.27:0,61,618	0/0:7,0:7:14.84:0,15,188
chr10	13220826	.	GTGTGTGTGTATGTA	G	1635.71	PASS	AB=1.000;AC=8;AF=0.143;AN=56;BaseQRankSum=2.793;DP=729;FS=13.008;HRun=0;HaplotypeScore=334.8753;InbreedingCoeff=0.4704;MQ=56.27;MQ0=13;MQRankSum=-4.531;QD=10.42;ReadPosRankSum=-0.687;VQSLOD=0.8756;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:45,0:45:2.05:2,0,1608	0/0:9,0:9:20.92:0,21,333	0/0:48,0:21:18.80:0,19,670	0/0:51,0:28:60.01:0,60,1260	0/0:20,0:20:44.82:0,45,758	1/1:1,12:13:15.05:617,15,0	1/1:17,0:16:20.23:362,20,0	0/0:36,0:33:61.82:0,62,577	0/0:21,0:21:48.04:0,48,1407	0/0:34,0:33:86.82:0,87,1742	0/0:21,0:21:38.95:0,39,847	0/0:24,0:24:68.99:0,69,1631	0/0:22,0:22:53.94:0,54,1169	0/0:23,0:22:53.95:0,54,1217	0/0:30,0:30:65.83:0,66,1198	0/0:25,0:25:48.40:0,48,1245	0/0:28,0:28:68.74:0,69,1072	0/0:26,0:26:49.85:0,50,1250	0/1:21,0:21:99:254,0,189	0/1:32,0:32:7.78:525,0,8	0/1:29,0:28:17.16:17,0,241	0/0:25,0:25:54.01:0,54,1248	0/0:23,0:23:50.91:0,51,1615	0/0:31,0:31:77.91:0,78,2462	0/0:20,0:20:30.10:0,30,925	0/0:23,0:23:62.79:0,63,1414	0/0:25,0:25:65.85:0,66,1347	0/0:7,0:7:17.99:0,18,298
chr10	13220828	.	GTGTGTGTATGTA	G	5237.18	PASS	AB=1.000;AC=30;AF=0.536;AN=56;BaseQRankSum=-12.478;DP=723;FS=2.546;HRun=0;HaplotypeScore=297.2388;InbreedingCoeff=-0.2963;MQ=56.06;MQ0=13;MQRankSum=-0.671;QD=9.30;ReadPosRankSum=0.131;VQSLOD=3.4792;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:26.76:0,27,976	0/1:8,0:8:79.93:80,0,114	0/0:47,0:20:21:0,21,206	0/0:48,0:25:48.03:0,48,471	0/1:19,0:19:99:176,0,293	1/1:13,0:13:15.05:426,15,0	1/1:17,0:16:16.74:108,17,0	1/1:36,0:33:28.92:455,29,0	0/1:22,0:22:23.82:24,0,880	0/1:32,0:31:99:149,0,827	0/1:23,0:23:84.85:85,0,462	0/1:24,0:24:91.78:92,0,783	0/1:21,0:21:84.99:85,0,620	0/1:25,0:24:94.80:95,0,674	0/1:30,0:30:99:170,0,521	0/1:25,0:25:81.84:82,0,747	0/1:28,0:28:99:234,0,312	0/1:26,0:26:99:176,0,618	1/1:5,15:20:44.95:804,45,0	1/1:0,32:32:35.92:1117,36,0	1/1:26,0:25:35.74:371,36,0	0/1:26,0:26:53.84:54,0,619	0/1:22,0:22:93.82:94,0,1223	0/1:31,0:31:99:121,0,1927	0/0:20,0:20:27.09:0,27,640	0/1:24,0:24:86.30:86,0,774	0/1:26,0:26:99:124,0,700	0/1:7,0:7:30.99:31,0,105
chr10	13220836	.	ATGTATGTG	A	5876.25	PASS	AB=0.989;AC=30;AF=0.536;AN=56;BaseQRankSum=-11.841;DP=726;FS=2.431;HRun=0;HaplotypeScore=259.9653;InbreedingCoeff=-0.3169;MQ=53.91;MQ0=13;MQRankSum=-0.152;QD=10.22;ReadPosRankSum=-6.989;VQSLOD=2.1595;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:46,1:47:24.50:0,24,195	0/1:8,0:8:9.54:80,0,10	0/0:39,0:13:20.52:0,21,193	0/0:40,0:19:48.03:0,48,471	0/1:20,0:20:46.03:196,0,46	1/1:12,0:12:15.05:263,15,0	0/1:20,0:19:20.73:86,0,21	1/1:38,0:35:74.36:571,74,0	0/1:24,0:24:66.62:67,0,162	0/1:32,3:34:99:514,0,104	0/1:24,0:24:50.42:135,0,50	0/1:24,0:24:99:159,0,138	0/1:20,1:21:73.12:199,0,73	0/1:25,0:24:97.44:189,0,97	0/1:28,0:28:58.38:215,0,58	0/1:27,0:27:99:186,0,310	0/1:27,0:27:47.54:275,0,48	0/1:27,0:27:78.86:219,0,79	1/1:17,0:17:44.92:503,45,0	1/1:32,0:32:35.85:629,36,0	1/1:26,0:25:35.43:318,35,0	0/1:27,0:27:85.64:169,0,86	0/1:27,0:27:85.02:85,0,872	0/1:30,0:30:99:168,0,1215	0/0:24,0:24:25.74:0,26,202	0/1:22,1:23:99:283,0,146	0/1:25,1:26:99:290,0,103	1/1:7,0:7:1.15:76,1,0
chr10	13220840	.	ATGTG	A	15280.54	PASS	AB=0.876;AC=47;AF=0.839;AN=56;BaseQRankSum=-2.880;DP=716;FS=29.151;HRun=0;HaplotypeScore=187.3596;InbreedingCoeff=0.3325;MQ=53.67;MQ0=13;MQRankSum=0.911;QD=23.62;ReadPosRankSum=1.266;VQSLOD=3.1333;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,41:47:41.97:866,42,0	1/1:4,3:7:18:211,18,0	0/0:31,0:9:20.95:0,21,201	0/0:38,0:18:48.03:0,48,471	1/1:15,6:21:47.98:538,48,0	1/1:12,0:12:14.98:125,15,0	0/1:21,0:20:77.49:77,0,128	1/1:41,0:38:99:787,107,0	1/1:9,16:25:60.13:946,60,0	1/1:23,11:33:94.69:1237,95,0	1/1:13,11:24:42.06:585,42,0	1/1:13,11:24:69.08:928,69,0	1/1:11,9:20:53.93:726,54,0	1/1:16,10:25:63.08:833,63,0	1/1:16,12:28:60.05:766,60,0	0/1:23,4:27:68.14:587,0,68	1/1:23,4:27:62.88:619,63,0	1/1:18,9:27:71.15:891,71,0	1/1:16,0:16:41.24:315,41,0	1/1:32,0:32:35.82:350,36,0	1/1:26,0:25:33.64:267,34,0	1/1:19,8:27:57.06:754,57,0	0/1:28,0:28:99:163,0,324	0/1:30,0:30:99:219,0,454	0/1:1,22:23:16.40:427,0,16	1/1:15,8:23:66.15:943,66,0	1/1:17,9:26:69.10:955,69,0	1/1:3,2:5:14.99:165,15,0
chr10	13220896	.	AT	A	14253.68	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=1.198;DP=682;FS=0.000;HRun=4;HaplotypeScore=151.9874;InbreedingCoeff=0.9983;MQ=63.31;MQ0=1;MQRankSum=-1.345;QD=30.92;ReadPosRankSum=2.402;VQSLOD=3.3087;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:58:99:0,144,1932	1/1:1,7:8:24.06:276,24,0	0/0:23,0:18:47.96:0,48,588	0/0:9,0:8:17.92:0,18,158	1/1:2,19:21:59.57:674,60,0	0/0:21,0:21:48.11:0,48,613	0/0:14,0:14:42.07:0,42,503	1/1:2,25:27:75.17:851,75,0	1/1:6,23:29:75.21:876,75,0	1/1:8,33:41:99:1272,114,0	1/1:4,24:28:72.06:802,72,0	1/1:4,13:17:45.10:507,45,0	1/1:4,15:19:51.99:578,52,0	1/1:5,17:22:57.11:645,57,0	1/1:4,23:27:78.07:864,78,0	1/1:1,30:31:78.19:911,78,0	1/1:1,19:20:57.17:680,57,0	1/1:7,23:30:84.11:923,84,0	0/0:25,0:24:64.31:0,64,772	0/0:29,0:29:86.47:0,86,1010	0/0:20,0:20:57.10:0,57,770	1/1:3,19:22:60.10:689,60,0	1/1:0,28:28:69.05:826,69,0	1/1:6,26:32:90.18:1024,90,0	0/0:22,0:22:45.15:0,45,624	1/1:3,22:25:72.17:827,72,0	1/1:1,20:21:57.10:652,57,0	1/1:1,12:13:33.05:378,33,0
chr10	13221519	.	C	CA	7513.73	PASS	AB=0.833;AC=42;AF=0.750;AN=56;BaseQRankSum=-8.676;DP=582;FS=11.580;HRun=10;HaplotypeScore=65.0520;InbreedingCoeff=0.7303;MQ=64.11;MQ0=6;MQRankSum=1.322;QD=17.89;ReadPosRankSum=0.179;VQSLOD=4.7783;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:39:99:0,107,862	1/1:5,12:17:33.08:352,33,0	0/1:29,0:14:9.44:9,0,107	0/0:34,0:18:12.52:0,13,104	1/1:6,18:25:4.56:401,5,0	1/1:9,0:16:16.95:83,17,0	1/1:9,0:8:5.77:32,6,0	1/1:14,19:29:1.86:421,2,0	1/1:2,13:16:29.72:300,30,0	1/1:6,21:27:63.15:665,63,0	1/1:7,14:21:17.42:377,17,0	1/1:0,8:8:21.05:224,21,0	1/1:5,13:18:35.80:352,36,0	0/1:5,7:14:17.31:108,0,17	1/1:4,16:20:45.11:480,45,0	1/1:0,13:13:24.06:256,24,0	1/1:3,20:23:29.62:518,30,0	1/1:4,14:17:22.27:423,22,0	0/0:21,0:20:41.93:0,42,343	0/0:26,0:26:65.89:0,66,538	0/0:19,0:21:49.01:0,49,381	1/1:3,12:16:32.87:319,33,0	1/1:6,18:24:32.50:551,32,0	1/1:1,17:18:23.76:456,24,0	0/0:21,0:19:59.92:0,60,490	1/1:2,19:21:57.10:584,57,0	1/1:5,22:27:48.12:507,48,0	1/1:1,5:6:9.02:96,9,0
chr10	13221530	.	G	GAA	570.34	PASS	AB=0.608;AC=2;AF=0.036;AN=56;BaseQRankSum=1.284;DP=616;FS=1.715;HRun=10;HaplotypeScore=99.9696;InbreedingCoeff=0.0966;MQ=64.49;MQ0=6;MQRankSum=-6.600;QD=13.58;ReadPosRankSum=2.703;VQSLOD=2.0382;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,114,1493	0/0:14,0:14:42.11:0,42,472	0/0:34,0:19:24.51:0,25,366	0/0:30,0:15:26.24:0,26,299	0/0:31,0:31:65.01:0,65,796	0/1:9,13:22:9.48:351,0,9	0/1:6,13:18:13.58:309,0,14	0/0:38,0:34:92.89:0,93,1074	0/0:16,0:16:35.22:0,35,356	0/0:26,0:26:72.12:0,72,821	0/0:20,0:20:53.92:0,54,558	0/0:10,0:10:26.80:0,27,276	0/0:19,0:19:41.38:0,41,455	0/0:14,0:14:33.01:0,33,363	0/0:21,0:21:57.10:0,57,647	0/0:17,0:17:36.09:0,36,414	0/0:21,0:21:50.98:0,51,497	0/0:19,0:18:18.58:0,19,429	0/0:17,0:16:41.61:0,42,513	0/0:23,0:23:60.19:0,60,797	0/0:18,0:18:51.17:0,51,673	0/0:18,0:18:28.70:0,29,426	0/0:24,0:24:69.19:0,69,787	0/0:20,0:20:51.12:0,51,561	0/0:24,0:22:69.23:0,69,915	0/0:23,0:23:65.99:0,66,737	0/0:27,0:27:62.06:0,62,652	0/0:8,0:8:21.03:0,21,225
chr10	13221763	.	TAA	T	927.11	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.442;DP=614;FS=0.677;HRun=9;HaplotypeScore=73.2689;InbreedingCoeff=0.9942;MQ=67.94;MQ0=1;MQRankSum=1.138;QD=26.49;ReadPosRankSum=0.388;VQSLOD=3.5070;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:82.52:0,83,1332	0/0:11,0:11:24.08:0,24,393	0/0:13,0:11:19.25:0,19,272	0/0:15,0:14:30.58:0,31,475	0/0:37,0:37:99:0,108,1767	1/1:1,13:14:33.10:385,33,0	1/1:1,20:21:57.17:664,57,0	0/0:35,0:35:90.31:0,90,1466	0/0:24,0:24:63.22:0,63,1031	0/0:26,0:26:66.23:0,66,1079	0/0:21,0:21:60.20:0,60,971	0/0:19,0:19:51.17:0,51,834	0/0:27,0:27:69.24:0,69,1133	0/0:14,0:14:39.12:0,39,613	0/0:31,0:31:78.27:0,78,1280	0/0:21,0:21:60.20:0,60,985	0/0:24,0:25:35.92:0,36,727	0/0:24,0:24:60.18:0,60,952	0/0:19,0:19:54.17:0,54,860	0/0:26,0:26:75.26:0,75,1227	0/0:15,0:15:42.13:0,42,664	0/0:18,0:18:48.16:0,48,787	0/0:22,0:22:63.22:0,63,1034	0/0:9,0:9:24.07:0,24,371	0/0:21,0:21:54.18:0,54,882	0/0:28,0:28:75.25:0,75,1208	0/0:36,0:36:99:0,102,1656	0/0:13,0:13:39.09:0,39,567
chr10	13223864	.	ATGTATG	A	292.60	PASS	AB=0.917;AC=9;AF=0.196;AN=46;BaseQRankSum=4.988;DP=507;FS=11.414;HRun=0;HaplotypeScore=114.6097;InbreedingCoeff=0.1366;MQ=33.29;MQ0=9;MQRankSum=-2.282;QD=2.50;ReadPosRankSum=0.820;VQSLOD=1.1001;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/1:9,3:12:0.02:0,0,0	0/0:39,0:20:63.68:0,64,1583	0/0:30,0:14:39.13:0,39,923	./.	0/0:10,0:10:9.50:0,10,227	0/0:18,0:18:36.07:0,36,852	0/0:64,0:54:99:0,151,4475	0/1:15,1:16:6.19:6,0,61	0/1:29,4:33:99:284,0,1552	0/0:21,1:22:2.98:0,3,73	0/0:11,1:12:3.01:0,3,56	0/0:6,0:6:6.02:0,6,149	1/1:5,0:5:0.81:2,1,0	0/0:18,0:18:3.01:0,3,38	0/0:12,1:13:2.88:0,3,42	0/0:2,0:2:2.78:0,3,15	./.	0/0:10,0:8:21.03:0,21,513	0/1:18,1:19:0:0,0,0	0/0:18,0:18:10.28:0,10,203	0/0:39,1:40:3.01:0,3,93	0/0:22,1:23:3.01:0,3,76	./.	./.	0/1:27,0:27:33.33:33,0,1627	1/1:5,0:5:2.23:66,2,0	0/0:6,2:8:17.64:0,18,421
chr10	13223868	.	ATG	A	237.59	PASS	AB=0.941;AC=9;AF=0.196;AN=46;BaseQRankSum=6.633;DP=561;FS=18.028;HRun=0;HaplotypeScore=114.3049;InbreedingCoeff=0.0426;MQ=34.62;MQ0=9;MQRankSum=-2.224;QD=1.90;ReadPosRankSum=2.193;VQSLOD=1.2276;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/1:14,0:14:0:0,0,0	0/0:46,0:23:72.55:0,73,1134	0/0:36,0:17:42.14:0,42,694	./.	0/0:12,0:12:13.40:0,13,196	0/0:18,0:18:36.07:0,36,568	0/0:65,0:55:99:0,154,2622	0/1:15,3:18:33.67:34,0,45	0/1:33,5:38:99:211,0,915	0/0:20,4:24:2.96:0,3,52	0/0:13,0:13:3.01:0,3,52	0/0:6,1:7:6:0,6,100	0/0:6,0:6:2.74:0,3,12	0/0:20,1:21:3:0,3,37	0/0:14,1:14:2.85:0,3,16	1/1:2,0:2:2.50:9,2,0	./.	0/0:14,0:12:27.07:0,27,389	1/1:17,2:19:0.47:1,0,0	0/0:22,0:22:9.49:0,9,156	0/0:28,13:41:3.01:0,3,52	0/0:18,7:25:3.01:0,3,52	./.	./.	0/1:27,1:28:57.44:57,0,929	0/1:6,0:6:29.44:32,0,29	0/0:8,0:8:14.26:0,14,215
chr10	13223870	.	G	GTGTGTGCA	1475.77	PASS	AB=0.931;AC=9;AF=0.188;AN=48;BaseQRankSum=6.713;DP=599;FS=19.240;HRun=0;HaplotypeScore=152.9607;InbreedingCoeff=-0.0301;MQ=34.27;MQ0=10;MQRankSum=-2.574;QD=10.54;ReadPosRankSum=-0.777;VQSLOD=1.5103;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:14,0:14:2.60:0,3,11	0/0:50,0:25:72.17:0,72,1658	0/0:40,0:19:39.60:0,40,1056	./.	0/0:12,0:12:13.40:0,13,287	0/0:17,0:18:36.12:0,36,875	0/0:67,0:57:25.56:0,26,3893	0/1:19,2:21:74.50:87,0,74	0/1:39,0:39:99:649,0,1386	0/0:23,1:24:2.98:0,3,80	0/0:10,2:13:2.80:0,3,71	0/0:7,1:8:6.02:0,6,143	0/1:9,0:9:0:0,0,0	0/0:18,4:22:2.61:0,3,64	0/1:16,2:18:14.19:67,0,14	1/1:2,0:2:3.01:62,3,0	./.	0/1:14,0:12:9.85:10,0,550	0/0:23,0:23:0.47:0,0,1	0/0:24,0:24:10.07:0,10,226	0/0:41,2:43:3.48:0,3,83	0/0:25,1:26:3.01:0,3,82	./.	0/0:19,2:21:0:0,0,0	0/1:23,4:28:99:614,0,1331	0/1:7,1:8:43.55:103,0,44	0/0:8,0:8:1.46:0,1,334
chr10	13223896	.	A	ATG	2256.67	PASS	AB=0.998;AC=30;AF=0.625;AN=48;BaseQRankSum=-1.426;DP=785;FS=0.000;HRun=0;HaplotypeScore=181.9566;InbreedingCoeff=0.0007;MQ=36.73;MQ0=15;MQRankSum=1.245;QD=4.06;ReadPosRankSum=1.604;VQSLOD=2.7533;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	0/1:16,0:16:0.08:1,0,0	0/1:67,0:26:12.14:12,0,198	0/0:71,1:30:27.56:0,28,352	./.	1/1:5,11:16:16.94:290,17,0	1/1:6,17:23:13.98:746,14,0	0/1:77,0:70:35.53:278,0,36	0/1:25,0:25:1.82:51,0,2	0/1:47,0:48:32.74:290,0,33	0/1:26,0:26:0:0,0,0	1/1:18,0:18:2.99:25,3,0	1/1:14,0:14:1.09:56,1,0	0/0:12,0:12:2.98:0,3,22	0/1:27,0:27:0.02:0,0,0	0/1:21,0:20:0.01:0,0,0	1/1:7,0:7:10.96:70,11,0	1/1:4,0:4:11.02:79,11,0	0/1:19,0:18:59.43:93,0,59	0/1:26,0:26:10.41:13,0,10	1/1:36,0:35:4.45:41,4,0	0/0:52,0:52:0:0,0,0	./.	./.	1/1:26,0:26:2.82:21,3,0	0/1:38,0:38:35.81:191,0,36	0/1:9,0:9:10.59:18,0,11	1/1:13,0:12:3.26:109,3,0
chr10	13223898	.	G	GTA	725.95	PASS	AB=0.986;AC=17;AF=0.327;AN=52;BaseQRankSum=5.136;DP=780;FS=6.821;HRun=0;HaplotypeScore=188.7111;InbreedingCoeff=0.1832;MQ=36.98;MQ0=15;MQRankSum=-0.713;QD=2.69;ReadPosRankSum=6.690;VQSLOD=0.9434;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:3.35:0,3,16	0/1:15,1:16:0.08:1,0,0	0/0:66,0:25:46.52:0,47,653	0/0:66,1:27:48.04:0,48,592	./.	0/1:16,0:16:5.11:122,0,5	1/1:21,2:23:5.36:398,5,0	0/0:74,0:68:99:0,103,956	0/1:25,0:25:18.05:19,0,18	0/1:47,1:48:99:169,0,181	0/0:25,1:26:3:0,3,25	1/1:17,1:18:2.04:7,2,0	0/1:14,0:14:17.53:38,0,18	0/0:12,0:12:5.89:0,6,38	0/1:27,0:27:0.02:0,0,0	0/1:21,0:20:0.01:0,0,0	1/1:7,0:7:6.22:33,6,0	1/1:4,0:4:8.49:27,8,0	0/0:19,0:18:19.43:0,19,200	0/0:26,1:27:11.45:0,11,71	0/0:37,0:36:1.59:0,2,46	0/0:48,3:51:0:0,0,0	0/0:33,1:34:2.98:0,3,22	./.	0/0:24,2:26:4.04:0,4,17	0/1:36,2:38:43.45:43,0,257	0/0:9,0:9:4.13:0,4,54	0/1:13,0:12:3.79:4,0,55
chr10	13223900	.	G	GTGTGTA	7032.96	PASS	AB=0.790;AC=31;AF=0.596;AN=52;BaseQRankSum=1.816;DP=775;FS=53.719;HRun=0;HaplotypeScore=199.1416;InbreedingCoeff=0.2093;MQ=35.58;MQ0=15;MQRankSum=-4.366;QD=16.02;ReadPosRankSum=0.841;VQSLOD=2.4333;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,2:9:5.98:46,6,0	1/1:12,4:16:0.90:2,1,0	0/0:63,0:21:23.37:0,23,607	0/0:67,0:26:43.76:0,44,762	./.	0/0:16,0:16:8.17:0,8,56	0/0:25,0:25:38.31:0,38,184	0/1:53,8:59:86.99:1471,0,87	0/1:18,6:25:34.99:193,0,35	0/1:36,11:48:99:1452,0,121	0/0:18,5:25:2.90:0,3,16	1/1:10,5:18:3.48:104,3,0	0/1:9,6:15:7.27:228,0,7	1/1:8,4:12:5.88:89,6,0	1/1:16,10:27:1.23:3,1,0	0/1:14,7:20:0.14:0,0,0	1/1:6,2:8:10.85:185,11,0	1/1:1,3:4:9.02:235,9,0	1/1:13,5:17:2.65:847,3,0	1/1:24,3:28:12.04:166,12,0	1/1:25,11:35:0.85:187,1,0	0/0:47,4:51:0.47:0,0,1	0/0:30,4:34:2.92:0,3,17	./.	1/1:26,1:27:5.83:96,6,0	0/1:32,6:40:67:1091,0,67	0/1:8,3:11:22.77:148,0,23	1/1:6,7:12:6.47:489,6,0
chr10	13223901	.	TGTGTGTGTGC	T	1387.20	PASS	AB=0.949;AC=12;AF=0.231;AN=52;BaseQRankSum=3.732;DP=773;FS=13.313;HRun=0;HaplotypeScore=233.3948;InbreedingCoeff=-0.0303;MQ=35.70;MQ0=15;MQRankSum=-5.133;QD=3.75;ReadPosRankSum=4.051;VQSLOD=0.9918;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:5.99:0,6,50	0/0:15,1:16:1.44:0,1,4	0/1:62,0:20:35.53:36,0,947	0/0:69,0:27:6.60:0,7,1417	./.	0/0:16,0:16:23.10:0,23,848	0/0:25,0:25:54.52:0,55,1706	0/1:62,0:58:11.69:12,0,1331	0/1:25,0:25:3.94:4,0,151	0/1:47,1:48:99:666,0,1150	0/0:23,1:24:0.47:0,0,1	0/0:18,0:18:3.79:0,4,82	0/0:15,0:15:1.84:0,2,178	0/0:12,0:12:5.75:0,6,65	0/0:26,1:27:0.98:0,1,2	0/1:21,0:20:0.21:0,0,0	0/0:8,0:8:11.06:0,11,162	0/1:3,1:4:72.59:73,0,190	0/0:18,0:17:30.31:0,30,897	0/0:24,4:28:17.01:0,17,319	0/0:38,0:37:26.05:0,26,307	0/1:47,4:51:0:0,0,0	1/1:26,7:33:2.98:21,3,0	./.	0/0:23,4:27:5.93:0,6,80	0/1:37,2:39:99:564,0,888	0/1:10,1:11:7.14:7,0,163	0/1:12,1:12:99:128,0,408
chr10	13223906	.	GTGTGCA	G	1593.57	PASS	AB=0.991;AC=13;AF=0.260;AN=50;BaseQRankSum=5.900;DP=778;FS=14.306;HRun=0;HaplotypeScore=212.9460;InbreedingCoeff=-0.1244;MQ=38.16;MQ0=13;MQRankSum=-4.432;QD=4.93;ReadPosRankSum=2.578;VQSLOD=1.6309;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:15.05:0,15,221	0/0:16,0:16:0.48:0,0,2	0/0:66,0:24:22.23:0,22,970	0/0:67,0:26:42.99:0,43,1140	./.	0/0:16,0:16:20.48:0,20,547	0/0:25,0:25:54.51:0,55,1215	0/1:53,0:50:99:229,0,429	0/1:25,0:25:38.96:45,0,39	0/1:43,3:46:99:578,0,419	./.	0/0:19,0:19:3.32:0,3,23	0/1:15,0:15:41.95:42,0,61	0/0:12,0:12:4.70:0,5,23	1/1:28,0:28:2.88:23,3,0	0/1:21,0:20:0.21:0,0,0	0/0:9,0:9:10.05:0,10,47	0/1:5,0:5:14.93:15,0,71	0/1:17,0:16:73.33:73,0,705	0/0:28,1:29:21.04:0,21,359	0/0:44,0:43:5.89:0,6,408	0/1:48,2:50:0:0,0,0	0/0:31,1:32:2.97:0,3,20	./.	0/0:28,0:28:5.25:0,5,51	0/1:38,0:38:99:527,0,402	0/1:12,0:12:45.23:95,0,45	0/1:13,0:12:96.40:96,0,156
chr10	13223907	.	T	TACATGA	271.61	PASS	AB=0.964;AC=10;AF=0.200;AN=50;BaseQRankSum=4.505;DP=772;FS=18.514;HRun=0;HaplotypeScore=228.8181;InbreedingCoeff=0.0749;MQ=39.15;MQ0=13;MQRankSum=-5.932;QD=1.74;ReadPosRankSum=5.527;VQSLOD=1.0316;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:15:0,15,218	1/1:16,0:16:0.82:2,1,0	0/0:65,0:25:57.02:0,57,1102	0/0:69,0:27:56.90:0,57,1121	./.	0/0:15,1:16:13.14:0,13,281	0/0:25,0:25:53.68:0,54,676	0/0:47,0:45:34.33:0,34,1168	0/1:23,2:25:22.59:23,0,51	0/1:43,2:45:99:229,0,991	./.	1/1:20,0:20:3.11:15,3,0	0/1:15,0:15:12.82:13,0,125	0/0:11,1:12:5.95:0,6,87	0/0:26,2:28:1.26:0,1,8	0/0:20,1:20:0:0,0,1	0/1:8,1:9:97.29:97,0,123	0/0:5,0:5:0.59:0,1,73	0/0:16,0:16:25.79:0,26,457	0/0:28,0:29:20.77:0,21,365	0/0:42,0:41:38.29:0,38,653	0/0:50,0:50:0.47:0,0,1	0/0:32,0:32:3.01:0,3,51	./.	0/0:28,0:28:6.47:0,6,120	0/0:36,0:36:39.53:0,40,870	0/1:13,0:13:1.02:1,0,174	0/1:13,0:12:6.92:7,0,163
chr10	13223908	.	GTGCATA	G	2636.09	PASS	AB=0.883;AC=15;AF=0.313;AN=48;BaseQRankSum=4.845;DP=771;FS=22.953;HRun=0;HaplotypeScore=207.2619;InbreedingCoeff=-0.2034;MQ=39.16;MQ0=12;MQRankSum=-4.915;QD=6.29;ReadPosRankSum=1.585;VQSLOD=1.3034;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:11:15.05:0,15,340	0/0:11,3:16:0.64:0,1,2	0/1:65,0:24:11.94:12,0,867	0/0:71,0:27:42.97:0,43,1129	./.	0/0:17,0:17:23.49:0,23,650	0/0:25,0:25:53.98:0,54,1104	0/1:46,0:45:99:474,0,241	0/1:14,10:25:6.15:65,0,6	0/1:34,7:45:99:843,0,309	./.	0/0:15,4:20:1.89:0,2,5	0/1:10,4:15:18.13:60,0,18	0/0:9,3:12:2.73:0,3,23	1/1:20,7:28:1.71:5,2,0	0/1:13,8:21:0.21:0,0,0	0/0:8,0:9:10.67:0,11,63	0/1:5,0:5:22.40:38,0,22	0/1:15,1:16:99:154,0,693	0/0:25,4:29:21.07:0,21,501	0/1:41,0:40:26.38:26,0,636	0/1:42,6:50:0:0,0,0	./.	./.	0/0:28,0:28:5.66:0,6,101	0/1:28,6:36:99:809,0,254	0/1:11,2:13:57.97:125,0,58	0/1:11,2:12:68.48:153,0,68
chr10	13223910	.	GCA	G	1090	PASS	AB=0.923;AC=18;AF=0.375;AN=48;BaseQRankSum=9.557;DP=721;FS=47.052;HRun=0;HaplotypeScore=184.5767;InbreedingCoeff=-0.0407;MQ=39.66;MQ0=11;MQRankSum=-6.018;QD=3.05;ReadPosRankSum=6.300;VQSLOD=1.3363;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:8,3:11:15.05:0,15,252	0/0:12,2:14:0.14:0,0,0	0/0:59,0:20:40.69:0,41,631	0/0:65,1:25:21.67:0,22,625	./.	0/0:16,0:16:25.43:0,25,325	0/0:25,0:25:54.02:0,54,651	0/1:28,1:31:89.86:90,0,382	1/1:21,1:23:8.74:52,9,0	0/1:40,3:44:81.33:430,0,81	./.	1/1:18,1:20:2.64:22,3,0	0/1:13,1:15:8.78:49,0,9	0/0:10,0:10:5.99:0,6,58	1/1:27,1:28:2.95:23,3,0	0/1:20,0:19:0:0,0,0	0/1:8,1:9:9.89:10,0,40	0/1:5,0:5:14.41:39,0,14	0/1:12,0:14:41.21:41,0,461	0/0:27,1:28:20.27:0,20,275	0/1:39,1:39:6.54:7,0,482	0/1:32,17:49:0:0,0,0	./.	./.	0/0:18,10:28:5.33:0,5,90	0/1:30,4:35:90.44:337,0,90	0/1:13,0:13:33.48:33,0,64	0/1:11,0:10:19.20:96,0,19
chr10	13223912	.	A	ATG	1068.37	PASS	AB=0.973;AC=15;AF=0.326;AN=46;BaseQRankSum=8.892;DP=727;FS=16.380;HRun=0;HaplotypeScore=190.8819;InbreedingCoeff=0.0094;MQ=39.54;MQ0=10;MQRankSum=-4.490;QD=4.14;ReadPosRankSum=4.710;VQSLOD=1.7511;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:18.05:0,18,256	1/1:13,1:14:0.89:2,1,0	0/0:58,0:20:47.34:0,47,566	0/0:67,0:22:48.26:0,48,599	./.	0/0:16,0:16:24.71:0,25,358	0/0:23,2:25:53.79:0,54,617	0/1:33,0:33:77.82:78,0,603	0/1:23,0:23:3.89:40,0,4	0/1:39,5:44:99:444,0,217	./.	1/1:17,3:20:2.94:19,3,0	0/1:15,0:15:40.95:54,0,41	0/0:11,0:11:5.95:0,6,60	1/1:27,1:28:3.01:39,3,0	0/1:20,0:19:0:0,0,0	0/1:9,0:9:11.47:11,0,72	0/1:5,0:5:38.47:42,0,38	0/0:14,0:14:36.95:0,37,469	0/0:26,3:29:21.06:0,21,317	0/0:42,0:41:32.14:0,32,524	./.	./.	./.	0/0:26,2:28:5.78:0,6,91	0/1:30,6:36:99:415,0,244	0/0:13,0:13:0.86:0,1,134	0/1:11,0:10:57.03:57,0,73
chr10	13223913	.	T	TGTAC	401.41	PASS	AB=0.992;AC=13;AF=0.271;AN=48;BaseQRankSum=5.809;DP=728;FS=8.209;HRun=0;HaplotypeScore=203.3681;InbreedingCoeff=-0.0130;MQ=38.38;MQ0=10;MQRankSum=-4.706;QD=1.90;ReadPosRankSum=3.552;VQSLOD=1.4152;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:18.04:0,18,339	1/1:13,1:14:0.78:1,1,0	0/0:60,0:21:49.80:0,50,750	0/0:64,0:20:47.42:0,47,838	./.	0/0:16,0:16:22.49:0,22,406	0/0:25,0:25:53.66:0,54,779	0/0:32,0:32:22.23:0,22,528	0/1:22,0:23:19.44:46,0,19	0/1:44,0:44:99:210,0,437	./.	1/1:21,0:21:3.37:27,3,0	0/1:15,0:15:37.79:38,0,84	0/0:11,0:11:5.83:0,6,73	0/0:27,0:28:1.61:0,2,6	0/1:20,0:19:0:0,0,0	0/1:9,0:9:14.82:15,0,115	0/1:5,0:5:31.65:32,0,48	0/0:15,0:15:38.23:0,38,538	0/0:28,1:29:20.84:0,21,395	0/0:41,0:40:38.23:0,38,721	0/0:47,3:50:0:0,0,0	./.	./.	0/0:26,2:28:6.02:0,6,125	0/1:35,1:36:99:107,0,430	0/1:13,0:13:6.65:7,0,161	0/1:11,0:10:47.05:47,0,104
chr10	13223920	.	GTGTA	G	3564.46	PASS	AB=0.711;AC=25;AF=0.500;AN=50;BaseQRankSum=3.330;DP=718;FS=34.396;HRun=0;HaplotypeScore=188.9680;InbreedingCoeff=0.3810;MQ=37.87;MQ0=11;MQRankSum=-5.737;QD=11.24;ReadPosRankSum=2.162;VQSLOD=1.7082;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:21.07:0,21,532	0/0:10,4:14:0.77:0,1,2	0/0:54,0:17:38.31:0,38,970	0/0:63,0:18:28.44:0,28,789	./.	0/0:14,0:15:24.55:0,25,648	0/0:24,0:24:42.01:0,42,837	0/1:20,11:32:99:699,0,132	1/1:14,7:21:8.70:118,9,0	0/1:33,11:44:99:692,0,188	1/1:14,9:24:2.99:24,3,0	1/1:9,11:20:2.72:55,3,0	0/1:6,7:13:60.63:178,0,61	1/1:5,5:10:5.74:74,6,0	1/1:15,12:28:2.64:17,3,0	1/1:13,8:20:2.91:49,3,0	0/1:2,6:8:28.16:157,0,28	1/1:1,4:5:6.42:180,6,0	0/0:14,0:14:22.15:0,22,681	0/0:30,0:30:19.05:0,19,608	0/0:46,0:46:52.22:0,52,1189	./.	1/1:22,5:27:3.01:47,3,0	./.	0/0:27,0:27:9.73:0,10,182	0/1:26,11:37:99:652,0,165	1/1:4,8:13:17.30:268,17,0	1/1:5,6:10:16.10:353,16,0
chr10	13223930	.	GTA	G	773.97	PASS	AB=0.882;AC=9;AF=0.173;AN=52;BaseQRankSum=7.882;DP=707;FS=0.000;HRun=0;HaplotypeScore=184.4987;InbreedingCoeff=-0.0365;MQ=36.67;MQ0=14;MQRankSum=-3.689;QD=3.91;ReadPosRankSum=2.397;VQSLOD=2.7568;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:13,1:14:24.08:0,24,439	0/0:8,4:12:0.46:0,0,1	0/0:55,0:19:46.97:0,47,729	0/0:62,1:13:36.05:0,36,554	./.	0/0:14,0:14:25.44:0,25,442	0/0:16,2:18:27.09:0,27,492	0/1:40,4:38:90.86:91,0,532	0/1:22,2:24:6.53:7,0,31	0/1:30,7:37:99:346,0,159	0/0:16,4:20:2.90:0,3,16	0/0:18,4:22:5.38:0,5,57	0/1:13,1:14:21.99:22,0,105	0/0:12,0:12:9.10:0,9,59	1/1:24,3:27:4.12:39,4,0	0/0:18,0:17:2.97:0,3,20	0/0:10,1:11:12.30:0,12,58	0/1:6,1:7:3.64:4,0,69	0/0:13,0:13:34.36:0,34,590	0/0:24,5:29:36.11:0,36,557	0/0:54,1:54:69.94:0,70,1116	0/0:36,8:44:5.99:0,6,50	0/0:19,7:26:2.98:0,3,21	./.	0/0:20,7:27:18.75:0,19,235	0/1:25,10:35:99:375,0,114	0/0:11,1:12:1.64:0,2,32	0/1:9,1:10:15.96:16,0,50
chr10	13223943	.	AGT	A	584.63	PASS	AB=0.846;AC=6;AF=0.120;AN=50;BaseQRankSum=7.843;DP=684;FS=15.267;HRun=0;HaplotypeScore=179.1421;InbreedingCoeff=-0.1321;MQ=37.78;MQ0=24;MQRankSum=-4.427;QD=3.70;ReadPosRankSum=0.349;VQSLOD=2.0921;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:17,2:19:33.08:0,33,465	0/0:5,6:11:0.47:0,0,1	0/0:54,0:19:44.97:0,45,627	0/0:58,0:15:38.96:0,39,518	./.	0/0:14,0:14:21.94:0,22,296	0/0:13,1:14:15.02:0,15,175	0/1:47,10:46:99:249,0,766	0/0:22,5:26:5.60:0,6,40	0/1:20,9:29:99:199,0,435	0/0:11,5:16:3.01:0,3,46	0/0:19,3:20:6.02:0,6,83	0/1:10,4:13:80.40:80,0,163	0/0:8,3:11:9.03:0,9,128	./.	0/0:10,5:15:3.01:0,3,47	0/0:11,1:11:11.71:0,12,122	0/0:9,0:8:14.65:0,15,233	0/0:13,0:13:33.05:0,33,433	0/0:21,4:25:37.49:0,37,527	0/0:63,2:65:84.08:0,84,1253	0/0:21,8:29:6.02:0,6,95	0/0:18,3:21:3.01:0,3,45	./.	0/0:20,4:24:24.63:0,25,237	0/1:31,3:33:99:101,0,412	0/1:13,1:13:17.88:18,0,149	0/1:8,2:10:54.67:55,0,124
chr10	13223944	.	G	GTA	467.87	PASS	AB=0.968;AC=8;AF=0.154;AN=52;BaseQRankSum=8.140;DP=690;FS=24.088;HRun=0;HaplotypeScore=186.5917;InbreedingCoeff=-0.0036;MQ=37.97;MQ0=24;MQRankSum=-6.866;QD=2.53;ReadPosRankSum=-1.184;VQSLOD=1.0713;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:33.11:0,33,506	0/1:11,0:11:0.07:1,0,0	0/0:52,0:18:50.84:0,51,660	0/0:59,0:15:42.01:0,42,544	./.	0/0:13,0:14:25.57:0,26,349	0/0:15,0:15:23.58:0,24,292	0/1:54,5:48:99:328,0,849	0/0:29,0:28:8.93:0,9,95	0/1:28,0:29:97.23:97,0,500	0/0:16,0:16:3.01:0,3,46	0/0:22,0:20:5.50:0,6,90	0/1:14,0:13:34.56:35,0,202	0/0:11,0:11:8.74:0,9,136	1/1:28,0:28:0.88:2,1,0	0/0:14,0:13:2.90:0,3,46	0/0:12,0:11:11.66:0,12,176	0/0:9,0:8:20.67:0,21,286	0/0:14,0:14:36.11:0,36,507	0/0:25,0:25:36.12:0,36,533	0/0:67,1:68:90.21:0,90,1246	0/0:28,0:29:6.02:0,6,92	0/0:21,0:21:3.01:0,3,46	./.	0/0:24,0:24:24.08:0,24,364	0/1:31,1:33:99:104,0,561	0/0:14,0:13:13.25:0,13,218	0/1:10,0:10:14.35:14,0,164
chr10	13223954	.	ATGTGTGTGTG	A	734.19	PASS	AB=0.918;AC=21;AF=0.438;AN=48;BaseQRankSum=-1.370;DP=657;FS=4.483;HRun=0;HaplotypeScore=214.8424;InbreedingCoeff=0.4309;MQ=36.21;MQ0=31;MQRankSum=-2.491;QD=3.06;ReadPosRankSum=-3.002;VQSLOD=2.3068;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:21:36.11:0,36,744	0/0:9,3:12:2.24:0,2,5	./.	./.	./.	0/0:15,0:15:13.06:0,13,262	0/0:14,0:15:18.53:0,19,463	0/0:57,0:42:8.69:0,9,79	1/1:17,9:26:2.74:89,3,0	0/1:27,0:28:57.16:57,0,114	1/1:17,1:18:8.66:121,9,0	0/1:20,1:19:0.13:64,0,0	0/0:13,0:12:0:0,0,0	0/1:10,0:10:0.02:0,0,0	0/1:11,11:22:0:0,0,0	1/1:13,0:12:2.34:24,2,0	1/1:12,1:12:2.66:99,3,0	1/1:11,0:10:6.69:174,7,0	0/0:19,0:16:15.05:0,15,451	0/0:26,0:26:42.04:0,42,1287	0/0:68,0:68:99:0,99,3397	1/1:26,0:26:3.01:71,3,0	./.	1/1:8,2:10:2.88:24,3,0	0/0:22,0:25:24.08:0,24,463	0/1:30,1:30:99:133,0,168	0/0:12,0:11:0.47:0,0,2	1/1:7,3:10:2.96:19,3,0
chr10	13224235	.	GCCACTC	G	4529.54	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=11.599;DP=552;FS=3.557;HRun=0;HaplotypeScore=117.9632;InbreedingCoeff=0.9936;MQ=87.39;MQ0=0;MQRankSum=-10.145;QD=48.19;ReadPosRankSum=-2.379;VQSLOD=4.3428;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,26:27:60.21:1417,60,0	0/0:5,0:5:15.05:0,15,383	0/0:26,0:26:75.21:0,75,2359	0/0:18,0:18:48:0,48,1579	0/0:13,0:13:33.11:0,33,1173	0/0:18,0:18:51.16:0,51,1735	0/0:35,0:35:93.32:0,93,3204	0/0:21,0:21:54.16:0,54,1764	0/0:24,0:24:72.25:0,72,2483	0/0:18,0:18:51.18:0,51,1781	0/0:6,0:6:18.06:0,18,629	0/0:19,0:19:57.20:0,57,1995	0/0:19,0:19:54.19:0,54,1868	0/0:28,0:28:81.28:0,81,2885	0/0:18,0:18:54.17:0,54,1832	0/0:21,0:21:63.22:0,63,2198	0/0:33,0:33:96.30:0,96,3210	0/0:19,0:19:51.18:0,51,1816	1/1:1,22:23:63.14:1221,63,0	1/1:1,9:10:23.95:459,24,0	1/1:1,20:21:30.06:654,30,0	0/0:17,0:17:51.18:0,51,1769	0/0:11,0:11:30.10:0,30,1036	0/0:28,0:28:78.25:0,78,2698	1/1:0,13:13:33.11:778,33,0	0/0:32,0:32:96.31:0,96,3278	0/0:15,0:13:45.14:0,45,1519	0/0:14,0:14:39.13:0,39,1368
chr10	13227778	.	T	TTCTA	26332.86	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=8.958;DP=576;FS=2.823;HRun=0;HaplotypeScore=152.5149;InbreedingCoeff=0.9928;MQ=71.74;MQ0=0;MQRankSum=-12.623;QD=54.07;ReadPosRankSum=2.420;VQSLOD=6.2314;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,21:22:42.14:1086,42,0	1/1:1,9:10:21.07:512,21,0	0/0:15,0:15:39.12:0,39,667	0/0:27,0:27:46.46:0,46,916	1/1:0,23:24:51.09:1230,51,0	0/0:17,0:17:45.14:0,45,815	0/0:30,0:30:84.22:0,84,1421	1/1:3,6:11:27.03:516,27,0	1/1:3,19:24:51.18:1362,51,0	1/1:5,28:34:93.32:2272,93,0	1/1:1,15:16:39.13:1003,39,0	1/1:2,14:16:33.11:881,33,0	1/1:3,13:15:42.14:1029,42,0	1/1:4,17:21:39.13:1044,39,0	1/1:2,29:30:54.18:1364,54,0	1/1:2,24:25:54.18:1409,54,0	1/1:3,15:17:39.13:931,39,0	1/1:6,15:21:51.18:1330,51,0	1/1:1,7:9:23.94:409,24,0	1/1:2,19:21:45.15:1160,45,0	1/1:1,13:15:24.08:554,24,0	1/1:3,22:23:48.16:1284,48,0	1/1:1,17:18:39.13:953,39,0	1/1:3,16:19:33.11:786,33,0	1/1:1,15:16:45.15:1166,45,0	1/1:5,27:33:84.19:2021,84,0	1/1:2,25:27:63.22:1627,63,0	1/1:0,10:10:15.05:404,15,0
chr10	13228931	.	C	CGTG	23688.96	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=8.065;DP=705;FS=1.461;HRun=0;HaplotypeScore=177.2581;InbreedingCoeff=0.9433;MQ=79.80;MQ0=0;MQRankSum=-9.307;QD=39.35;ReadPosRankSum=6.418;VQSLOD=5.4269;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,19:29:39.09:793,39,0	1/1:6,5:11:20.99:364,21,0	0/0:26,0:26:57.18:0,57,830	0/0:28,0:28:64.78:0,65,950	1/1:13,8:21:6.01:130,6,0	0/0:16,0:16:36.12:0,36,553	0/0:33,0:33:84.26:0,84,1286	1/1:13,15:28:54.18:1063,54,0	1/1:5,24:29:69.24:1481,69,0	1/1:9,11:20:36.04:652,36,0	1/1:8,9:17:24.07:518,24,0	1/1:5,31:37:90.29:1916,90,0	1/1:4,18:23:42.14:871,42,0	1/1:5,29:35:90.31:1942,90,0	1/1:4,14:18:36.12:778,36,0	1/1:2,19:21:54.18:1168,54,0	1/1:5,33:38:90.31:1946,90,0	1/1:8,32:40:87.26:1839,87,0	1/1:15,11:26:36.12:663,36,0	1/1:6,13:21:27.09:555,27,0	1/1:27,35:62:99:2107,102,0	1/1:5,12:17:24.08:517,24,0	1/1:4,6:10:12.04:259,12,0	1/1:12,30:42:77.90:1687,78,0	1/1:3,7:10:18.05:351,18,0	1/1:6,10:17:36.06:691,36,0	1/1:5,21:27:57.19:1204,57,0	1/1:0,3:3:9.03:194,9,0
chr10	13228936	.	T	TGGG	15223.37	PASS	AB=1.000;AC=39;AF=0.696;AN=56;BaseQRankSum=10.915;DP=675;FS=4.156;HRun=3;HaplotypeScore=205.5914;InbreedingCoeff=0.2410;MQ=81.87;MQ0=0;MQRankSum=-6.831;QD=26.75;ReadPosRankSum=11.661;VQSLOD=0.7368;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:31,0:31:6.50:529,0,6	0/1:9,0:9:16.90:208,0,17	0/0:26,0:26:66.13:0,66,966	0/0:27,0:27:62.57:0,63,1026	1/1:15,0:15:5.67:87,6,0	0/0:19,0:19:42.09:0,42,600	0/0:34,0:34:96.25:0,96,1415	0/1:27,0:27:76.71:614,0,77	1/1:28,0:28:40.22:903,40,0	0/1:15,0:15:7.84:404,0,8	1/1:16,0:16:27.07:381,27,0	1/1:37,0:37:53.33:1225,53,0	1/1:23,0:23:11.14:573,11,0	1/1:33,2:35:39.34:1282,39,0	1/1:18,0:18:18.15:516,18,0	0/1:24,0:24:2.69:700,0,3	1/1:38,0:38:7.37:1116,7,0	1/1:36,0:36:51.59:1169,52,0	0/1:23,0:23:44.75:551,0,45	0/1:19,0:19:2.92:329,0,3	1/1:58,1:60:16.01:1303,16,0	0/1:16,0:16:24.81:334,0,25	1/1:10,0:10:15.01:192,15,0	1/1:37,0:37:44:1129,44,0	1/1:8,1:9:18.65:229,19,0	1/1:15,0:15:0.14:459,0,0	1/1:23,0:23:60.15:864,60,0	0/1:5,0:5:30.86:126,0,31
chr10	13229147	.	GGT	G	19252.61	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=4.343;DP=582;FS=3.055;HRun=0;HaplotypeScore=123.8125;InbreedingCoeff=0.9645;MQ=70.00;MQ0=0;MQRankSum=-4.042;QD=37.31;ReadPosRankSum=5.735;VQSLOD=6.7623;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,42:45:99:1448,102,0	1/1:1,6:7:12.04:183,12,0	0/0:12,0:12:29.11:0,29,427	0/0:11,0:11:12.81:0,13,355	1/1:0,14:14:30.05:433,30,0	0/0:13,0:13:39.12:0,39,698	0/0:30,0:30:90.31:0,90,1737	1/1:0,21:21:63.20:941,63,0	1/1:0,30:30:84.29:1281,84,0	1/1:1,18:19:57.19:851,57,0	1/1:0,9:9:21.07:321,21,0	1/1:0,22:22:51.17:777,51,0	1/1:1,15:16:45.15:688,45,0	1/1:2,34:36:99:1513,99,0	1/1:0,20:20:42.14:643,42,0	1/1:0,19:19:57.19:872,57,0	1/1:0,32:32:84.24:1254,84,0	1/1:0,36:36:96.80:1470,97,0	1/1:4,14:18:45.14:664,45,0	1/1:0,12:12:18.02:250,18,0	1/1:1,48:49:99:1463,99,0	1/1:2,16:18:40.02:599,40,0	1/1:1,12:13:36.12:548,36,0	1/1:0,23:23:54.18:827,54,0	1/1:0,16:16:30.10:459,30,0	1/1:0,19:19:57.18:850,57,0	1/1:1,18:19:51.17:780,51,0	1/1:0,3:3:9.03:138,9,0
chr10	13231034	.	TTTCTCC	T	2245.71	PASS	AB=1.000;AC=10;AF=0.185;AN=54;BaseQRankSum=-0.085;DP=601;FS=12.275;HRun=0;HaplotypeScore=148.6711;InbreedingCoeff=0.6483;MQ=62.73;MQ0=25;MQRankSum=1.479;QD=20.99;ReadPosRankSum=-1.632;VQSLOD=2.5486;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:26:49.96:0,50,1019	0/0:8,0:8:1.05:0,1,252	0/0:23,0:13:38.85:0,39,574	0/0:35,0:22:51.06:0,51,962	0/0:25,0:25:0.02:0,0,493	1/1:17,0:17:39.09:648,39,0	1/1:14,0:13:39.13:593,39,0	0/0:36,0:35:82.03:0,82,1610	0/0:26,0:26:50.58:0,51,810	0/0:23,0:21:34.90:0,35,826	0/0:18,0:17:42.83:0,43,518	0/0:20,0:20:18.59:0,19,855	0/0:22,0:21:42.43:0,42,921	0/0:13,0:13:28.89:0,29,526	0/0:26,0:26:56.02:0,56,876	0/1:26,0:26:99:117,0,913	0/0:21,0:20:16.62:0,17,874	0/0:21,0:20:54.07:0,54,889	1/1:1,11:12:36.10:539,36,0	./.	1/1:16,0:15:30.10:497,30,0	0/0:30,0:29:80.78:0,81,1243	0/0:16,0:15:31.83:0,32,421	0/1:22,0:21:15.72:16,0,389	0/0:25,0:25:66.74:0,67,1171	0/0:24,0:24:51.85:0,52,975	0/0:25,0:23:61.18:0,61,1123	0/0:16,0:14:7.55:0,8,499
chr10	13231040	.	C	CCTCT	1483.89	PASS	AB=0.954;AC=37;AF=0.771;AN=48;BaseQRankSum=-0.139;DP=634;FS=3.065;HRun=0;HaplotypeScore=151.2184;InbreedingCoeff=0.4445;MQ=57.28;MQ0=31;MQRankSum=-1.699;QD=3.17;ReadPosRankSum=-2.003;VQSLOD=2.1573;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:27:2.57:0,3,24	1/1:9,0:9:1.89:48,2,0	./.	0/1:31,0:18:0:1,0,0	0/1:27,1:28:13.79:18,0,14	1/1:21,0:21:8.79:74,9,0	0/1:14,0:13:0:0,0,0	1/1:36,0:35:5.23:23,5,0	0/1:22,6:29:0.18:0,0,0	1/1:25,0:23:23.36:204,23,0	1/1:18,0:17:3:25,3,0	1/1:24,0:23:20.06:186,20,0	1/1:24,0:23:8.91:63,9,0	1/1:13,0:13:2.58:61,3,0	./.	1/1:28,0:28:26.78:228,27,0	1/1:23,0:22:11.92:110,12,0	1/1:19,0:18:6.48:70,6,0	0/1:14,0:13:0:0,0,0	./.	1/1:21,0:19:11.99:100,12,0	0/0:31,0:30:13.18:0,13,117	./.	1/1:24,0:23:3.01:24,3,0	0/0:26,0:26:14.71:0,15,143	1/1:26,0:25:7.56:33,8,0	1/1:26,0:24:20.44:254,20,0	1/1:15,0:13:6.49:90,6,0
chr10	13231307	.	AGGGGGT	A	18289.68	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=14.270;DP=590;FS=10.556;HRun=0;HaplotypeScore=146.5168;InbreedingCoeff=0.9827;MQ=70.48;MQ0=0;MQRankSum=-16.036;QD=46.42;ReadPosRankSum=3.519;VQSLOD=4.4419;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:66.20:0,66,1997	1/1:0,5:5:12.04:273,12,0	0/0:25,0:25:48.74:0,49,1430	0/0:15,0:14:33.09:0,33,982	1/1:3,27:30:48.14:1093,48,0	0/0:7,0:7:21.07:0,21,724	0/0:32,0:32:90.31:0,90,2994	1/1:5,14:19:42.13:876,42,0	1/1:1,24:25:66.23:1500,66,0	1/1:1,26:27:75.19:1556,75,0	1/1:3,20:23:30.10:683,30,0	1/1:0,26:26:63.22:1424,63,0	1/1:3,23:27:60.21:1365,60,0	1/1:4,20:24:42.14:956,42,0	1/1:1,23:24:66.22:1466,66,0	1/1:1,21:22:57.19:1260,57,0	1/1:2,19:21:27.09:585,27,0	1/1:0,12:12:24.08:546,24,0	0/0:10,0:10:23.29:0,23,703	0/0:16,0:16:33.58:0,34,1138	0/0:44,0:44:99:0,114,3666	1/1:2,20:22:45.15:1023,45,0	1/1:3,9:12:21.07:475,21,0	1/1:3,20:23:18.53:411,19,0	0/0:15,0:15:30.10:0,30,1000	1/1:2,17:19:48.16:1092,48,0	1/1:3,26:29:66.23:1500,66,0	1/1:0,4:4:9.03:205,9,0
chr10	13231709	.	A	ATTCTCTCT	9229.94	PASS	AB=0.995;AC=45;AF=0.804;AN=56;BaseQRankSum=-1.677;DP=598;FS=11.971;HRun=0;HaplotypeScore=178.5461;InbreedingCoeff=0.2509;MQ=75.31;MQ0=13;MQRankSum=-4.281;QD=18.21;ReadPosRankSum=-0.724;VQSLOD=3.3983;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:32:99:171,0,319	1/1:14,0:14:35.98:326,36,0	0/0:37,0:23:43.91:0,44,491	0/0:54,0:26:33.46:0,33,351	1/1:27,0:26:53.53:447,54,0	0/1:25,0:26:46.03:46,0,249	0/1:15,0:15:6.43:6,0,225	1/1:24,0:23:62.14:653,62,0	1/1:2,14:19:5.98:155,6,0	1/1:15,0:15:41.85:415,42,0	1/1:16,0:15:33.14:257,33,0	1/1:16,0:16:41.42:400,41,0	1/1:15,0:15:41.96:466,42,0	1/1:20,0:19:44.82:486,45,0	1/1:24,0:24:59.63:600,60,0	1/1:2,0:11:6.02:166,6,0	1/1:37,0:37:93.15:952,93,0	1/1:17,0:16:42.88:644,43,0	0/1:20,0:19:83.24:336,0,83	0/1:22,0:22:88.96:89,0,132	0/1:11,0:9:24.52:25,0,79	1/1:17,0:16:44.66:444,45,0	1/1:24,0:24:53.38:503,53,0	1/1:15,0:15:28.45:276,28,0	0/1:19,0:18:5.25:5,0,258	1/1:17,0:17:47.67:441,48,0	1/1:19,0:19:52.61:639,53,0	1/1:14,0:14:36.95:280,37,0
chr10	13232584	.	CCTCT	C	12595.43	PASS	AB=0.608;AC=40;AF=0.714;AN=56;BaseQRankSum=-10.936;DP=655;FS=2.300;HRun=0;HaplotypeScore=133.5959;InbreedingCoeff=0.7732;MQ=63.50;MQ0=7;MQRankSum=0.273;QD=28.50;ReadPosRankSum=3.221;VQSLOD=5.0843;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:35:74.10:0,74,335	1/1:2,6:8:18.06:302,18,0	0/0:45,0:22:1.20:0,1,518	0/0:44,0:28:28.50:0,29,523	1/1:8,18:25:48.16:790,48,0	0/1:6,1:14:22.11:22,0,131	0/0:9,1:28:10.54:0,11,239	1/1:13,16:28:45.14:727,45,0	1/1:4,16:19:39.13:631,39,0	1/1:10,16:26:48.15:776,48,0	1/1:3,14:17:33.11:554,33,0	1/1:2,8:11:24.08:378,24,0	1/1:6,18:26:57.18:912,57,0	1/1:5,12:17:30.10:503,30,0	1/1:9,16:22:39.12:632,39,0	1/1:4,12:16:36.12:605,36,0	1/1:3,17:20:39.13:655,39,0	1/1:2,12:14:24.08:403,24,0	0/0:13,0:22:28.20:0,28,162	0/0:6,0:18:27.70:0,28,137	0/1:11,2:36:63.98:64,0,249	1/1:4,20:25:63.21:1018,63,0	1/1:3,18:21:45.15:754,45,0	1/1:7,23:28:63.18:1029,63,0	0/0:10,0:21:21.96:0,22,100	1/1:7,17:22:39.11:628,39,0	1/1:6,13:20:42.14:683,42,0	1/1:6,10:15:33.11:532,33,0
chr10	13232808	.	A	AGCGGCGT	4350.14	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-2.563;DP=496;FS=23.274;HRun=0;HaplotypeScore=120.7843;InbreedingCoeff=0.9786;MQ=67.77;MQ0=1;MQRankSum=-8.545;QD=48.88;ReadPosRankSum=-5.418;VQSLOD=1.6921;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:69.22:0,69,1652	0/0:7,0:7:15.05:0,15,345	0/0:20,0:18:33.10:0,33,721	0/0:22,0:20:47.95:0,48,1090	0/0:14,0:14:33.09:0,33,687	1/1:2,9:11:18.06:692,18,0	1/1:9,17:29:48.16:1794,48,0	0/0:19,0:17:36.11:0,36,815	0/0:17,0:17:36.12:0,36,887	0/0:12,0:12:15.05:0,15,369	0/0:10,0:10:21.07:0,21,517	0/0:18,0:18:45.15:0,45,1081	0/0:14,0:14:27.09:0,27,662	0/0:23,0:23:54.19:0,54,1331	0/0:15,0:15:42.14:0,42,1035	0/0:10,0:10:30.10:0,30,740	0/0:19,0:19:45.15:0,45,1110	0/0:18,0:18:51.18:0,51,1258	1/1:5,2:9:15.05:422,15,0	1/1:3,8:13:15.05:574,15,0	1/1:19,8:27:27.55:868,28,0	0/0:7,0:7:18.06:0,18,443	0/0:18,0:18:27.08:0,27,616	0/0:41,0:41:99:0,114,2753	0/0:14,0:14:24.08:0,24,591	0/0:24,0:24:54.19:0,54,1329	0/0:30,0:30:87.28:0,87,2046	0/0:8,0:8:24.08:0,24,592
chr10	13233127	.	GAC	G	368.27	PASS	AB=0.919;AC=26;AF=0.591;AN=44;BaseQRankSum=-1.335;DP=534;FS=1.091;HRun=0;HaplotypeScore=68.6204;InbreedingCoeff=0.3247;MQ=68.32;MQ0=7;MQRankSum=0.429;QD=1.42;ReadPosRankSum=0.826;VQSLOD=0.9120;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:38:29.96:0,30,253	1/1:3,2:5:3.01:32,3,0	./.	./.	0/0:16,0:16:17.97:0,18,178	0/0:20,0:20:11.32:0,11,91	0/0:21,0:24:15.47:0,15,130	./.	1/1:14,6:20:6:63,6,0	1/1:27,0:27:2.84:14,3,0	./.	1/1:20,1:21:6.01:61,6,0	0/1:13,1:14:25.61:26,0,38	1/1:15,3:18:2.96:32,3,0	1/1:16,0:16:3.01:31,3,0	1/1:14,1:15:3.01:32,3,0	0/1:29,1:30:22.65:23,0,36	0/1:11,1:12:1.14:37,0,1	0/0:16,0:16:3.48:0,3,42	0/0:12,0:12:8.89:0,9,113	0/0:37,0:37:15.50:0,16,183	./.	1/1:9,3:12:3.01:32,3,0	1/1:27,6:33:3:32,3,0	1/1:12,0:12:6.01:63,6,0	./.	0/1:14,3:17:25.61:26,0,38	1/1:6,0:8:2.84:14,3,0
chr10	13233983	.	A	AGGGTGGCCGGCTTTGGGA	1571.90	PASS	AB=0.667;AC=28;AF=0.933;AN=30;BaseQRankSum=-2.751;DP=50;FS=9.932;HRun=0;HaplotypeScore=31.2833;InbreedingCoeff=-0.1241;MQ=129.64;MQ0=2;MQRankSum=-2.498;QD=40.31;ReadPosRankSum=-1.486;VQSLOD=0.2386;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,0:3:3.01:107,3,0	./.	0/1:3,1:6:38.90:498,0,39	0/1:3,0:6:0.09:284,0,0	1/1:2,0:2:3:25,3,0	1/1:3,0:4:3:25,3,0	./.	1/1:2,0:2:3.01:52,3,0	1/1:2,0:2:3.01:49,3,0	1/1:1,0:1:3.01:48,3,0	./.	1/1:3,0:3:9.03:128,9,0	./.	./.	./.	1/1:1,0:1:0.47:1,0,0	1/1:2,0:2:2.98:22,3,0	./.	1/1:1,0:1:3.01:53,3,0	./.	./.	1/1:2,0:2:6.02:150,6,0	./.	./.	./.	./.	1/1:2,0:2:6:100,6,0	1/1:0,0:1:3.01:112,3,0
chr10	13234825	.	TTTTTTTTTTTTG	T	1227.40	PASS	AB=0.844;AC=11;AF=0.196;AN=56;BaseQRankSum=6.698;DP=597;FS=20.991;HRun=0;HaplotypeScore=172.9075;InbreedingCoeff=0.4467;MQ=57.23;MQ0=28;MQRankSum=-0.383;QD=10.40;ReadPosRankSum=-0.059;VQSLOD=1.4496;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:57.82:0,58,2908	0/0:9,0:9:27.07:0,27,643	0/0:71,0:12:33.01:0,33,932	0/0:83,0:22:39.44:0,39,659	0/0:26,0:25:59.61:0,60,1267	1/1:1,13:14:14.89:433,15,0	0/1:8,11:19:8.95:305,0,9	0/0:20,0:20:53.79:0,54,966	0/0:17,0:17:45.14:0,45,1086	0/0:27,0:27:80.26:0,80,1619	0/0:17,0:17:50.35:0,50,1011	0/0:20,0:20:34.07:0,34,1308	0/0:12,0:12:36.12:0,36,974	0/0:19,0:19:35.44:0,35,1300	0/0:11,0:10:30.09:0,30,685	0/0:18,0:17:47.93:0,48,1139	0/0:26,0:25:45.03:0,45,1485	0/0:11,0:11:30.09:0,30,652	0/1:5,12:17:50.92:362,0,51	1/1:0,8:8:5.61:86,6,0	1/1:2,13:14:8.76:133,9,0	0/1:16,0:16:0.29:0,0,700	0/0:15,0:15:12.80:0,13,625	0/0:15,0:15:16.95:0,17,696	0/0:15,0:15:42.14:0,42,1614	0/1:15,0:15:4.22:4,0,738	0/0:17,0:17:50.48:0,50,857	0/1:14,0:9:50.92:51,0,253
chr10	13234839	.	GA	G	4954.88	PASS	AB=0.909;AC=54;AF=0.964;AN=56;BaseQRankSum=-5.544;DP=423;FS=0.000;HRun=3;HaplotypeScore=73.5550;InbreedingCoeff=-0.0490;MQ=62.44;MQ0=21;MQRankSum=-2.331;QD=11.71;ReadPosRankSum=1.942;VQSLOD=2.8473;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:24:62.74:488,63,0	1/1:4,0:4:11.87:85,12,0	0/1:44,6:11:41.91:93,0,42	0/1:68,6:25:99:106,0,179	1/1:12,1:13:26.75:199,27,0	1/1:11,0:11:8.73:50,9,0	1/1:12,0:12:11.65:66,12,0	1/1:18,0:18:44.78:351,45,0	1/1:6,0:6:11.98:98,12,0	1/1:14,1:15:29.95:257,30,0	1/1:9,0:9:17.76:123,18,0	1/1:12,0:12:29.81:225,30,0	1/1:6,0:6:14.89:110,15,0	1/1:11,0:11:26.84:205,27,0	1/1:11,0:11:32.93:267,33,0	1/1:11,0:10:23.84:183,24,0	1/1:17,0:16:41.74:315,42,0	1/1:7,0:7:20.78:145,21,0	1/1:9,1:10:26.72:200,27,0	1/1:6,0:6:2.92:17,3,0	1/1:16,0:16:8.75:52,9,0	1/1:13,0:13:38.57:280,39,0	1/1:7,0:7:5.80:33,6,0	1/1:11,0:11:20.65:146,21,0	1/1:10,0:10:17.89:136,18,0	1/1:11,0:11:32.85:255,33,0	1/1:12,0:12:32.85:255,33,0	1/1:16,0:11:28.73:218,29,0
chr10	13234992	.	A	AT	9719.22	PASS	AB=0.565;AC=37;AF=0.661;AN=56;BaseQRankSum=-14.357;DP=625;FS=12.127;HRun=10;HaplotypeScore=77.9318;InbreedingCoeff=0.9371;MQ=72.91;MQ0=0;MQRankSum=0.806;QD=24.67;ReadPosRankSum=-0.406;VQSLOD=4.2576;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:48:99:0,116,941	1/1:2,8:11:26.94:271,27,0	0/0:12,0:14:16.23:0,16,147	0/0:11,0:11:10.52:0,11,78	1/1:1,21:22:54.14:576,54,0	0/0:4,0:25:27.78:0,28,81	0/0:4,0:29:48.59:0,49,141	1/1:8,30:41:77.13:960,77,0	1/1:1,24:25:60.15:640,60,0	1/1:5,25:30:78.17:818,78,0	1/1:0,10:10:30.08:319,30,0	1/1:0,20:21:59.98:622,60,0	1/1:3,19:22:51.13:543,51,0	1/1:2,17:20:23.30:429,23,0	1/1:1,23:26:65.83:665,66,0	1/1:2,16:18:45.11:479,45,0	1/1:6,26:35:83.71:842,84,0	1/1:0,13:14:29.91:302,30,0	0/0:5,0:19:26.95:0,27,78	0/0:3,0:32:54.98:0,55,159	0/0:3,0:34:64.11:0,64,201	1/1:5,20:24:35.53:582,36,0	0/1:3,10:13:0.60:193,0,1	1/1:4,20:24:54.14:576,54,0	0/0:19,0:19:41.87:0,42,338	1/1:3,14:17:17.53:391,18,0	1/1:2,14:16:39.10:415,39,0	1/1:1,3:4:9.02:96,9,0
chr10	13235245	.	A	AGTGTGTGTGT	17022.35	PASS	AB=0.898;AC=49;AF=0.875;AN=56;BaseQRankSum=-2.634;DP=688;FS=55.439;HRun=0;HaplotypeScore=276.7796;InbreedingCoeff=0.3780;MQ=51.06;MQ0=24;MQRankSum=-4.494;QD=27.72;ReadPosRankSum=3.030;VQSLOD=2.6289;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:38:25.07:224,25,0	1/1:11,1:11:17.73:549,18,0	0/0:33,0:26:45.62:0,46,776	0/0:40,0:26:8.94:0,9,674	1/1:12,11:23:8.69:424,9,0	1/1:24,0:22:19.72:728,20,0	1/1:21,0:19:29.93:803,30,0	1/1:30,0:27:45.12:1201,45,0	1/1:18,15:32:41.45:1596,41,0	0/1:34,3:31:7.32:1269,0,7	1/1:13,1:15:5.67:242,6,0	1/1:24,5:25:25.23:1006,25,0	0/1:17,3:18:24.01:1082,0,24	1/1:20,0:18:5:213,5,0	1/1:18,2:16:17.55:681,18,0	1/1:22,3:22:22.90:1080,23,0	1/1:16,1:16:15.04:455,15,0	1/1:11,2:12:6.01:333,6,0	0/1:16,0:18:29.60:448,0,30	1/1:15,0:22:16.54:526,17,0	1/1:38,0:35:32.88:705,33,0	1/1:22,2:21:17.27:572,17,0	1/1:22,0:20:8.64:306,9,0	1/1:22,1:24:14.51:254,15,0	1/1:8,0:26:38.67:307,39,0	1/1:23,3:23:12.44:1307,12,0	1/1:18,0:15:16.10:698,16,0	1/1:7,0:7:4.04:13,4,0
chr10	13235269	.	GTA	G	1380.13	PASS	AB=0.897;AC=18;AF=0.321;AN=56;BaseQRankSum=6.497;DP=791;FS=64.359;HRun=0;HaplotypeScore=364.2954;InbreedingCoeff=-0.3256;MQ=41.52;MQ0=21;MQRankSum=-4.689;QD=2.97;ReadPosRankSum=-2.133;VQSLOD=-0.2224;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,114,1803	0/1:9,0:10:11.37:11,0,209	0/0:49,0:23:57.63:0,58,804	0/0:46,0:26:6.09:0,6,663	0/0:16,1:20:8.94:0,9,150	0/0:28,1:27:21.83:0,22,215	0/1:23,1:22:97.06:97,0,285	0/1:37,0:34:5.80:6,0,1101	0/1:25,4:30:99:127,0,266	0/1:43,3:44:99:166,0,1061	0/0:11,0:10:5.96:0,6,85	0/1:30,3:30:99:129,0,280	0/1:28,3:30:99:156,0,212	1/1:19,6:24:15.59:218,16,0	0/1:25,2:23:48.18:48,0,267	0/1:19,5:22:99:103,0,319	0/1:9,4:13:93.25:156,0,93	0/1:11,0:10:9.84:10,0,232	0/0:34,0:30:39.44:0,39,609	0/0:25,1:25:20.83:0,21,348	0/1:40,3:37:12.80:13,0,415	0/1:21,1:18:9.42:9,0,141	0/0:29,1:28:6.22:0,6,115	0/1:18,5:23:43.28:43,0,65	0/0:24,0:23:50.65:0,51,935	0/1:25,3:25:99:173,0,680	0/1:25,1:22:75.61:76,0,204	0/0:10,0:10:10.23:0,10,136
chr10	13235274	.	T	TA	735.10	PASS	AB=0.900;AC=16;AF=0.286;AN=56;BaseQRankSum=7.834;DP=777;FS=44.122;HRun=0;HaplotypeScore=385.6628;InbreedingCoeff=-0.4155;MQ=41.82;MQ0=8;MQRankSum=-7.114;QD=1.90;ReadPosRankSum=2.301;VQSLOD=1.6641;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,114,1589	0/1:11,1:12:31.75:32,0,144	0/0:53,0:24:64.92:0,65,848	0/0:48,0:25:64.49:0,64,904	0/0:20,0:20:5.84:0,6,81	0/0:26,1:26:6.60:0,7,121	0/1:22,0:20:66.82:67,0,309	0/1:38,4:40:65.56:66,0,1172	0/1:32,2:34:41.01:41,0,130	0/1:42,2:43:48.70:49,0,1105	0/1:10,1:11:0.81:1,0,30	0/1:27,6:31:61.84:62,0,194	0/1:33,2:34:68.21:68,0,162	0/0:24,0:23:1.71:0,2,69	0/1:22,4:25:57.61:58,0,124	0/1:22,2:23:24.22:24,0,235	0/1:9,1:11:12.81:13,0,114	0/1:9,1:9:48.82:49,0,167	0/0:30,0:26:57.07:0,57,731	0/0:27,0:27:21.37:0,21,235	0/0:39,0:37:26.50:0,27,345	0/0:21,3:19:6.76:0,7,85	0/0:26,5:30:6.06:0,6,84	0/1:19,2:21:5.39:5,0,41	0/0:21,0:21:50.95:0,51,713	0/1:28,1:27:75.13:75,0,638	0/1:17,5:20:99:135,0,180	0/1:6,3:10:99:141,0,182
chr10	13235355	.	G	GGT	8266.81	PASS	AB=1.000;AC=44;AF=0.786;AN=56;BaseQRankSum=8.935;DP=1281;FS=20.062;HRun=0;HaplotypeScore=646.2939;InbreedingCoeff=0.6801;MQ=41.38;MQ0=18;MQRankSum=-8.661;QD=8.52;ReadPosRankSum=-1.192;VQSLOD=2.6595;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,126,1560	1/1:23,4:26:14.67:264,15,0	0/0:88,0:35:37.85:0,38,605	0/0:100,0:39:51.49:0,51,474	0/0:38,11:49:0.12:0,0,1	1/1:33,1:31:19.02:256,19,0	1/1:38,0:37:12.64:260,13,0	1/1:49,5:53:80.81:615,81,0	1/1:38,5:42:39.37:502,39,0	1/1:78,7:85:99:1209,101,0	1/1:30,3:33:5.20:20,5,0	1/1:42,6:45:73.69:644,74,0	1/1:34,7:40:80.96:705,81,0	1/1:37,1:37:38.08:292,38,0	1/1:37,10:44:61.43:387,61,0	1/1:52,10:60:99:1001,123,0	1/1:18,0:18:10.60:131,11,0	1/1:14,0:13:18.03:130,18,0	0/1:27,0:25:3.81:162,0,4	1/1:59,2:58:7.05:86,7,0	1/1:45,0:40:4.61:89,5,0	1/1:47,13:56:20.23:115,20,0	1/1:49,6:55:11.20:192,11,0	0/1:30,0:30:16.11:25,0,16	0/0:21,0:21:48.01:0,48,672	1/1:41,1:41:82.18:518,82,0	1/1:33,4:35:34.67:358,35,0	1/1:25,1:26:39.77:305,40,0
chr10	13235363	.	TG	T	1249.07	PASS	AB=0.870;AC=20;AF=0.357;AN=56;BaseQRankSum=4.504;DP=1257;FS=51.340;HRun=2;HaplotypeScore=615.8888;InbreedingCoeff=-0.5071;MQ=40.15;MQ0=20;MQRankSum=-7.159;QD=1.55;ReadPosRankSum=-2.495;VQSLOD=0.1108;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:49,1:50:99:0,100,1932	0/1:20,7:26:72.94:73,0,83	0/0:89,0:27:73.26:0,73,924	0/0:99,0:31:66.27:0,66,760	0/0:36,13:50:5.60:0,6,22	0/1:32,0:29:65.26:65,0,91	0/1:33,0:33:39.51:40,0,49	0/1:41,5:46:68.33:152,0,68	0/1:35,8:43:90.69:99,0,91	0/1:58,17:75:99:217,0,237	0/1:21,10:32:1.22:1,0,10	0/0:42,5:44:12.78:0,13,136	0/1:36,4:40:34.33:34,0,114	0/1:34,4:37:20.18:20,0,51	0/1:42,4:43:3.29:3,0,82	0/1:50,10:57:52.99:53,0,98	0/1:14,4:18:40.27:40,0,52	0/1:17,0:16:2.07:2,0,37	0/1:25,1:24:61.48:106,0,61	0/0:53,7:59:1.53:0,2,54	0/1:39,5:39:52.55:53,0,62	0/1:56,9:61:48.32:48,0,49	0/1:41,19:60:32.38:157,0,32	0/0:32,2:34:14.40:0,14,48	0/0:20,0:20:57:0,57,853	0/1:31,9:39:60.24:77,0,60	0/1:24,10:32:50.54:85,0,51	0/1:16,7:23:5.58:75,0,6
chr10	13235364	.	G	GTAGT	25185.60	PASS	AB=0.657;AC=42;AF=0.750;AN=56;BaseQRankSum=5.368;DP=1269;FS=25.284;HRun=0;HaplotypeScore=555.0140;InbreedingCoeff=0.4928;MQ=40.01;MQ0=19;MQRankSum=-8.237;QD=26.15;ReadPosRankSum=-0.244;VQSLOD=3.7793;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,137,2680	0/1:14,9:25:13.30:729,0,13	0/0:89,0:27:60.64:0,61,967	0/0:98,0:30:49.57:0,50,840	0/0:34,8:49:1.01:0,1,4	1/1:12,15:29:18.29:1068,18,0	0/1:11,20:32:1.50:1015,0,2	1/1:29,12:43:99:1850,104,0	1/1:25,16:43:47.39:1578,47,0	1/1:44,23:79:97.01:3060,97,0	1/1:20,10:34:4.07:154,4,0	1/1:21,26:47:84.71:1790,85,0	1/1:16,17:37:83.44:1632,83,0	1/1:15,19:42:41.55:832,42,0	1/1:16,25:43:62.18:1510,62,0	1/1:27,26:58:99:2613,119,0	1/1:5,15:20:19.28:562,19,0	1/1:5,11:16:3.51:454,4,0	0/1:9,14:23:49.28:964,0,49	1/1:42,20:63:2.08:530,2,0	0/1:29,15:43:19.13:366,0,19	1/1:36,20:58:13.72:615,14,0	1/1:40,10:59:8.46:352,8,0	1/1:7,25:39:2.71:167,3,0	0/0:19,0:20:56.56:0,57,1119	1/1:15,23:40:75.06:1903,75,0	1/1:21,8:31:27.39:745,27,0	1/1:11,5:19:40.86:698,41,0
chr10	13235373	.	G	GTGTA	10213.41	PASS	AB=0.956;AC=27;AF=0.482;AN=56;BaseQRankSum=8.662;DP=1355;FS=33.714;HRun=0;HaplotypeScore=637.4028;InbreedingCoeff=-0.3960;MQ=39.86;MQ0=20;MQRankSum=-8.221;QD=9.23;ReadPosRankSum=5.427;VQSLOD=0.2976;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,132,2476	0/1:24,4:27:88.01:535,0,88	0/0:85,0:21:52.31:0,52,771	0/0:94,0:26:26.03:0,26,752	0/1:48,7:55:1.67:2,0,2	0/1:38,0:35:74.69:349,0,75	1/1:32,0:32:34.34:391,34,0	0/1:54,0:48:99:541,0,236	0/1:47,4:48:4.06:704,0,4	0/1:82,2:85:99:1090,0,448	0/1:33,2:35:21.61:22,0,39	0/1:50,4:51:21.37:798,0,21	0/1:39,4:42:11.72:900,0,12	0/1:43,0:42:36.40:274,0,36	0/1:44,6:47:6.68:482,0,7	1/1:57,6:60:23.31:1156,23,0	0/1:26,0:26:44.11:170,0,44	0/1:22,0:21:34.26:212,0,34	0/1:29,0:26:99:195,0,106	0/1:67,0:65:3.39:201,0,3	0/1:52,0:49:78.18:78,0,159	0/1:60,10:67:16.28:302,0,16	0/1:56,3:59:26.22:204,0,26	0/1:43,0:43:16.65:54,0,17	0/0:23,0:23:57.18:0,57,1079	0/1:48,1:48:50.12:765,0,50	0/1:32,2:32:56.75:383,0,57	1/1:21,1:22:19.91:406,20,0
chr10	13235378	.	GT	G	621.54	PASS	AB=0.874;AC=10;AF=0.179;AN=56;BaseQRankSum=14.150;DP=1328;FS=46.120;HRun=2;HaplotypeScore=580.1396;InbreedingCoeff=-0.2203;MQ=41.54;MQ0=20;MQRankSum=-9.262;QD=1.53;ReadPosRankSum=3.409;VQSLOD=-0.3410;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,138,2031	0/1:21,6:26:21.54:22,0,338	0/0:80,1:20:58.71:0,59,673	0/0:89,0:25:56.03:0,56,667	0/0:36,14:50:18.66:0,19,93	0/0:37,0:34:19.88:0,20,705	0/1:30,0:30:3.16:3,0,320	0/0:50,4:49:0.72:0,1,1345	0/0:47,7:51:43.99:0,44,1066	0/1:65,19:83:99:262,0,1489	0/0:23,10:33:13.78:0,14,152	0/0:43,5:45:24.73:0,25,949	0/1:33,5:37:81.61:82,0,845	0/0:37,6:42:41.25:0,41,614	0/0:45,3:44:60.11:0,60,833	0/0:50,9:56:37.69:0,38,1119	0/0:25,3:28:17.69:0,18,529	0/1:22,1:22:48.20:48,0,365	0/1:34,2:33:53.08:53,0,834	0/1:65,1:64:4.76:5,0,292	0/0:55,0:53:54.88:0,55,617	0/0:53,10:61:13.65:0,14,274	0/0:42,15:57:9.11:0,9,298	0/0:44,3:47:40.10:0,40,408	0/0:22,0:22:47.13:0,47,841	0/1:40,10:49:99:115,0,1115	0/1:20,11:29:57.16:57,0,405	0/1:15,7:22:99:112,0,250
chr10	13235379	.	T	TG	2843.44	PASS	AB=0.857;AC=17;AF=0.304;AN=56;BaseQRankSum=13.102;DP=1293;FS=61.037;HRun=1;HaplotypeScore=551.7799;InbreedingCoeff=-0.4643;MQ=41.94;MQ0=20;MQRankSum=-10.139;QD=3.91;ReadPosRankSum=3.902;VQSLOD=0.7774;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,138,1897	0/1:19,6:24:99:151,0,307	0/0:83,0:20:51.43:0,51,638	0/0:86,0:23:53.19:0,53,608	0/0:32,17:49:10.78:0,11,69	0/1:27,6:30:6.74:7,0,634	0/1:23,7:30:49.96:50,0,297	0/1:52,2:49:99:163,0,1244	0/0:46,5:48:6.53:0,7,964	0/1:65,12:76:99:869,0,1376	0/0:23,8:31:5.76:0,6,125	0/1:41,7:45:67.47:67,0,844	0/1:35,4:38:99:196,0,773	0/0:40,1:40:42.87:0,43,563	0/0:40,8:44:4.69:0,5,721	0/1:48,7:53:99:123,0,996	0/1:27,1:28:52.18:52,0,486	0/1:21,2:22:92.24:92,0,336	0/1:27,5:30:99:156,0,767	0/1:35,28:62:30.43:30,0,273	0/0:48,10:55:57.25:0,57,622	0/1:44,18:60:18:18,0,272	0/1:42,13:55:99:102,0,281	0/0:43,4:47:6.81:0,7,355	0/0:20,2:22:12.49:0,12,748	0/1:45,5:49:99:375,0,1026	0/1:24,5:27:99:281,0,391	0/1:18,5:23:99:266,0,239
chr10	13235401	.	G	GGT	3754.40	PASS	AB=0.795;AC=12;AF=0.214;AN=56;BaseQRankSum=13.459;DP=1351;FS=27.911;HRun=0;HaplotypeScore=529.1058;InbreedingCoeff=-0.2728;MQ=42.48;MQ0=17;MQRankSum=-11.117;QD=6.19;ReadPosRankSum=-2.231;VQSLOD=1.3709;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,142,1787	0/1:15,6:21:99:224,0,372	0/0:51,0:18:29.61:0,30,298	0/0:52,0:19:27.95:0,28,272	0/0:30,15:51:25.65:0,26,302	0/0:32,3:32:24.06:0,24,787	0/1:30,2:32:14.04:14,0,486	0/1:56,9:65:99:472,0,1084	0/0:39,3:42:73.99:0,74,1087	0/1:75,19:101:99:975,0,1675	0/0:28,8:41:40.06:0,40,504	0/0:40,5:44:74.50:0,74,1123	0/1:39,4:43:99:125,0,747	0/0:45,3:48:99:0,100,1096	0/0:45,3:49:89.51:0,90,940	0/0:44,2:48:31.06:0,31,835	0/0:32,2:34:14.97:0,15,699	0/0:27,0:27:49.78:0,50,691	0/1:45,2:40:99:139,0,718	0/1:41,24:65:99:126,0,587	0/0:76,4:77:47.73:0,48,1147	0/1:38,14:59:99:178,0,448	0/1:30,20:52:99:203,0,468	0/0:51,1:52:64.93:0,65,761	0/0:21,0:21:54.13:0,54,690	0/1:40,15:56:99:637,0,863	0/1:19,5:26:99:236,0,451	0/1:12,9:22:99:425,0,251
chr10	13235465	.	A	AGT	4766.79	PASS	AB=0.878;AC=10;AF=0.179;AN=56;BaseQRankSum=-9.722;DP=1256;FS=0.764;HRun=0;HaplotypeScore=387.9223;InbreedingCoeff=0.7456;MQ=46.21;MQ0=14;MQRankSum=3.372;QD=16.00;ReadPosRankSum=1.433;VQSLOD=4.0538;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:54,1:55:77.45:0,77,1451	0/0:9,0:9:11.95:0,12,131	0/0:62,0:26:38.45:0,38,393	0/0:54,0:20:20.57:0,21,243	0/0:38,0:38:14.60:0,15,166	1/1:10,9:19:24.08:391,24,0	1/1:17,26:43:81.16:1204,81,0	0/0:63,0:58:99:0,101,1172	0/0:50,0:49:75.09:0,75,906	0/0:83,0:81:99:0,108,1732	0/0:22,0:22:14.97:0,15,185	0/0:43,0:43:64.03:0,64,777	0/0:48,0:48:76.07:0,76,1022	0/0:40,0:40:54.13:0,54,645	0/0:38,0:37:39.12:0,39,480	0/0:53,0:53:99:0,105,1258	0/0:39,0:41:86.87:0,87,985	0/0:36,0:36:74.91:0,75,918	0/1:21,10:27:74.63:405,0,75	1/1:31,17:46:43.72:623,44,0	1/1:34,82:117:36.74:2129,37,0	0/0:49,0:48:38.51:0,39,465	0/0:42,0:40:27.02:0,27,305	0/0:57,0:57:86.85:0,87,1071	0/0:20,0:20:42.13:0,42,517	0/1:38,0:38:14.48:14,0,623	0/0:25,0:25:48.11:0,48,570	0/0:24,0:24:54.15:0,54,650
chr10	13236910	.	AAAAC	A	14795.63	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=12.327;DP=675;FS=7.804;HRun=0;HaplotypeScore=127.0087;InbreedingCoeff=0.9967;MQ=64.55;MQ0=3;MQRankSum=-1.156;QD=33.93;ReadPosRankSum=5.307;VQSLOD=4.6491;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:31:84.28:0,84,1898	1/1:3,5:8:15.05:261,15,0	0/0:30,0:23:68.60:0,69,1164	0/0:34,0:31:49.65:0,50,942	1/1:2,35:37:90.22:1425,90,0	0/0:19,0:18:45.15:0,45,1095	0/0:26,0:26:69.21:0,69,1510	1/1:13,20:33:57.14:829,57,0	1/1:5,20:25:39.13:678,39,0	1/1:4,21:25:63.21:1041,63,0	1/1:3,20:23:57.19:925,57,0	1/1:0,14:13:36.12:626,36,0	1/1:2,22:24:50.92:886,51,0	1/1:4,18:22:43.80:735,44,0	1/1:2,23:25:47.93:828,48,0	1/1:1,16:17:38.89:678,39,0	1/1:4,33:37:45.86:977,46,0	1/1:6,17:23:35.25:624,35,0	0/0:23,0:23:57.15:0,57,1164	0/0:23,0:23:57.19:0,57,1351	0/0:35,0:35:93.31:0,93,2140	1/1:1,18:19:51.17:843,51,0	1/1:4,15:19:29.85:500,30,0	1/1:2,21:23:42.14:710,42,0	0/0:17,0:17:51.17:0,51,1217	1/1:4,18:22:50.84:819,51,0	1/1:4,24:28:59.82:1043,60,0	1/1:3,9:11:21.07:365,21,0
chr10	13237727	.	TCACACACACACACACACACACACACA	T	9033.42	PASS	AB=0.832;AC=33;AF=0.635;AN=52;BaseQRankSum=8.050;DP=472;FS=31.866;HRun=0;HaplotypeScore=267.3192;InbreedingCoeff=0.5279;MQ=59.53;MQ0=8;MQRankSum=-7.282;QD=32.85;ReadPosRankSum=0.411;VQSLOD=2.4251;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:33:43.92:0,44,3436	1/1:6,1:7:3.01:202,3,0	0/0:23,0:12:6.49:0,6,250	0/0:33,0:17:15.05:0,15,404	1/1:13,6:19:13.24:515,13,0	1/1:12,7:19:12.04:808,12,0	0/1:14,2:16:26.43:196,0,26	./.	1/1:11,3:14:6.01:404,6,0	1/1:11,5:16:11.07:806,11,0	1/1:9,1:10:3.01:202,3,0	1/1:5,6:11:15.05:1010,15,0	1/1:11,3:14:2.14:201,2,0	1/1:9,3:12:9.03:606,9,0	1/1:9,5:14:15.05:1010,15,0	1/1:3,5:8:6.90:602,7,0	1/1:12,7:19:3:202,3,0	0/1:11,3:13:84.67:196,0,85	0/0:12,0:12:21.07:0,21,1550	0/0:4,0:6:3.01:0,3,259	0/0:31,0:30:39.13:0,39,2907	1/1:11,3:14:12.04:742,12,0	1/1:9,5:13:11.77:764,12,0	1/1:29,7:36:6.50:171,6,0	0/0:16,0:16:19.31:0,19,1855	0/0:18,0:17:3.01:0,3,44	0/1:13,5:18:0.22:396,0,0	./.
chr10	13238077	.	TG	T	731.07	PASS	AC=8;AF=0.148;AN=54;BaseQRankSum=2.206;DP=289;FS=11.550;HRun=3;HaplotypeScore=48.8650;InbreedingCoeff=0.8152;MQ=77.06;MQ0=0;MQRankSum=1.813;QD=29.24;ReadPosRankSum=-1.743;VQSLOD=1.4845;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:61.76:0,62,866	0/0:3,0:3:6.02:0,6,86	0/0:8,1:8:0.10:0,0,238	0/0:14,0:14:11.41:0,11,301	0/0:13,0:13:30.05:0,30,388	1/1:0,4:4:9.03:111,9,0	1/1:0,13:13:39.12:483,39,0	0/0:18,0:16:45.11:0,45,617	0/0:15,0:15:45.15:0,45,644	0/0:12,0:12:36.12:0,36,518	0/0:9,0:9:24.08:0,24,341	0/0:8,0:8:24.08:0,24,346	0/0:10,0:10:27.09:0,27,387	0/0:10,0:10:27.09:0,27,389	0/0:12,0:12:36.11:0,36,500	0/0:14,0:14:42.14:0,42,600	0/0:17,0:17:51.17:0,51,727	0/0:13,0:13:39.10:0,39,540	1/1:0,3:3:9.01:97,9,0	./.	1/1:0,5:5:15.05:186,15,0	0/0:8,0:8:24.07:0,24,327	0/0:12,0:12:33.11:0,33,470	0/0:12,0:12:36.12:0,36,518	0/0:11,0:11:33.11:0,33,474	0/0:9,0:9:27.09:0,27,381	0/0:11,0:11:33.11:0,33,475	0/0:1,0:1:3.01:0,3,43
chr10	13239402	.	CA	C	4619.68	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=15.106;DP=695;FS=9.804;HRun=2;HaplotypeScore=72.0595;InbreedingCoeff=0.9962;MQ=83.00;MQ0=0;MQRankSum=-4.215;QD=33.72;ReadPosRankSum=0.653;VQSLOD=4.3797;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,120,1775	0/0:13,0:13:36.12:0,36,539	0/0:19,0:19:57.17:0,57,802	0/0:21,0:21:63.17:0,63,880	0/0:21,0:21:60.20:0,60,899	1/1:0,19:19:48.16:623,48,0	1/1:1,32:33:81.26:1052,81,0	0/0:20,0:20:54.16:0,54,772	0/0:34,0:34:99:0,102,1486	0/0:25,0:25:69.23:0,69,1033	0/0:13,0:13:39.13:0,39,581	0/0:32,0:32:96.26:0,96,1348	0/0:27,0:27:75.25:0,75,1106	0/0:18,0:18:54.16:0,54,787	0/0:27,0:27:75.24:0,75,1103	0/0:27,0:27:78.26:0,78,1168	0/0:64,0:64:99:0,190,2738	0/0:33,0:33:96.25:0,96,1372	1/1:0,22:22:66.20:842,66,0	1/1:0,16:16:42.14:545,42,0	1/1:1,46:47:99:1558,120,0	0/0:13,0:13:39.13:0,39,583	0/0:20,0:20:60.20:0,60,895	0/0:28,0:28:81.26:0,81,1190	0/0:15,0:15:45.15:0,45,673	0/0:19,0:19:57.19:0,57,853	0/0:24,0:24:69.22:0,69,1009	0/0:5,0:5:15.05:0,15,225
chr10	13240023	.	C	CA	16093.59	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=13.438;DP=491;FS=2.428;HRun=0;HaplotypeScore=168.5919;InbreedingCoeff=0.9577;MQ=86.65;MQ0=0;MQRankSum=-9.532;QD=41.59;ReadPosRankSum=4.216;VQSLOD=4.1743;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,129,1800	1/1:0,8:8:24.08:364,24,0	0/0:26,0:26:58.16:0,58,895	0/0:16,0:16:44.11:0,44,532	1/1:0,15:15:31.35:522,31,0	1/1:0,13:13:39.13:605,39,0	1/1:0,25:25:72.23:1081,72,0	1/1:0,13:13:36.06:542,36,0	1/1:0,22:22:66.22:1034,66,0	1/1:1,12:13:38.87:584,39,0	1/1:0,4:4:12.04:191,12,0	1/1:1,17:18:41.95:738,42,0	1/1:0,29:29:87.30:1379,87,0	1/1:1,18:20:57.15:901,57,0	1/1:0,23:23:57.19:905,57,0	1/1:0,13:13:39.13:621,39,0	1/1:1,31:32:84.20:1296,84,0	1/1:0,15:15:45.15:717,45,0	1/1:0,14:14:39.13:610,39,0	1/1:0,12:12:27.09:430,27,0	1/1:1,25:26:41.82:710,42,0	1/1:0,9:9:27.09:421,27,0	1/1:0,2:2:6.02:96,6,0	1/1:0,22:22:48.06:758,48,0	0/0:18,0:18:54.18:0,54,750	1/1:1,12:13:39.11:586,39,0	1/1:0,18:18:48.16:764,48,0	1/1:0,8:8:15.05:239,15,0
chr10	13240339	.	AACACACAC	A	1297.58	PASS	AB=0.893;AC=23;AF=0.676;AN=34;BaseQRankSum=0.624;DP=445;FS=0.000;HRun=0;HaplotypeScore=119.1799;InbreedingCoeff=0.2988;MQ=61.32;MQ0=15;MQRankSum=-1.346;QD=7.54;ReadPosRankSum=0.689;VQSLOD=1.5795;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	0/0:15,1:16:0.47:0,0,1	1/1:8,1:10:9.02:117,9,0	0/0:28,0:28:3.01:0,3,45	0/0:20,0:18:1.25:0,1,3	1/1:11,5:16:9.03:204,9,0	1/1:15,2:17:9.03:200,9,0	1/1:5,1:5:2.97:29,3,0	1/1:10,2:11:3:74,3,0	./.	./.	1/1:16,3:18:6.02:146,6,0	1/1:9,5:14:9.03:203,9,0	1/1:17,0:18:2.87:56,3,0	./.	./.	./.	0/0:31,0:29:0:0,0,0	./.	./.	1/1:17,2:20:0.47:1,0,0	0/0:12,0:17:2.62:0,3,29	0/1:22,2:25:28.31:166,0,28	1/1:9,2:12:8.05:135,8,0	1/1:2,0:2:3.01:68,3,0
chr10	13240411	.	GTC	G	206.09	PASS	AB=0.939;AC=14;AF=0.269;AN=52;BaseQRankSum=2.710;DP=505;FS=29.845;HRun=0;HaplotypeScore=98.8955;InbreedingCoeff=-0.2748;MQ=59.44;MQ0=26;MQRankSum=-0.065;QD=0.97;ReadPosRankSum=1.116;VQSLOD=-0.4275;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:24:35.41:0,35,363	0/1:8,0:7:5.82:6,0,109	./.	./.	0/0:11,0:11:8.05:0,8,94	1/1:13,0:14:4.35:27,4,0	0/1:17,0:23:10.44:46,0,10	0/0:25,0:25:3.01:0,3,30	0/0:11,0:11:6:0,6,68	0/1:24,0:22:53.04:53,0,62	0/1:9,1:10:23.49:23,0,63	0/1:14,1:15:17.49:17,0,133	0/0:9,0:9:6.77:0,7,58	0/1:13,0:13:13.95:14,0,131	0/1:17,1:16:9.02:9,0,200	0/0:17,0:16:7.28:0,7,131	0/0:24,1:25:6.53:0,7,443	0/0:19,0:19:36.80:0,37,412	0/1:13,1:13:26.39:26,0,136	0/1:8,0:7:18.28:21,0,18	0/1:26,0:25:16.56:17,0,128	0/0:7,0:6:3.90:0,4,47	0/0:8,0:9:14.98:0,15,141	0/0:23,0:24:21.89:0,22,206	0/0:17,0:17:1.25:0,1,37	0/1:19,3:21:38.31:38,0,76	0/1:14,2:15:50.02:50,0,75	0/0:7,0:6:6.02:0,6,81
chr10	13241172	.	A	AT	6688.19	PASS	AB=0.566;AC=36;AF=0.643;AN=56;BaseQRankSum=-11.874;DP=521;FS=13.819;HRun=11;HaplotypeScore=63.1813;InbreedingCoeff=0.7947;MQ=80.15;MQ0=0;MQRankSum=0.023;QD=19.85;ReadPosRankSum=-0.659;VQSLOD=4.5612;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:30:42.23:0,42,467	1/1:2,11:13:24.01:233,24,0	0/0:18,0:18:21.65:0,22,144	0/0:13,0:14:8.29:0,8,57	1/1:4,17:21:21.77:381,22,0	0/0:21,0:22:55.81:0,56,421	0/0:18,0:19:46.23:0,46,337	0/1:7,14:21:4.43:308,0,4	1/1:3,8:11:0.81:189,1,0	1/1:7,15:22:42.55:427,43,0	1/1:4,15:19:35.93:327,36,0	1/1:1,11:12:30.06:305,30,0	1/1:1,6:7:9.02:91,9,0	1/1:2,12:14:6.82:249,7,0	1/1:2,7:9:0.80:185,1,0	1/1:3,15:18:36.06:361,36,0	1/1:1,15:16:24.86:434,25,0	1/1:2,14:16:39.08:396,39,0	0/0:5,0:25:43.71:0,44,141	0/0:1,0:21:35.08:0,35,101	0/0:1,0:17:24.44:0,24,71	1/1:6,17:23:53.94:532,54,0	1/1:4,22:26:54.11:548,54,0	0/1:2,15:17:1.38:351,0,1	0/0:18,0:18:35.82:0,36,278	1/1:8,20:28:30.87:481,31,0	1/1:5,16:21:36.07:365,36,0	1/1:4,19:23:33.88:524,34,0
chr10	13241290	.	TTGTGTGTGTGTGTG	T	2202.21	PASS	AC=20;AF=0.526;AN=38;BaseQRankSum=5.776;DP=484;FS=11.179;HRun=0;HaplotypeScore=168.5014;InbreedingCoeff=0.6404;MQ=78.56;MQ0=17;MQRankSum=-4.240;QD=13.76;ReadPosRankSum=-0.026;VQSLOD=2.0612;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:22:18.06:0,18,458	1/1:6,2:8:6.02:232,6,0	./.	./.	./.	0/0:18,0:18:18.06:0,18,574	0/0:19,0:19:15.05:0,15,310	./.	1/1:11,5:16:9.03:348,9,0	./.	./.	1/1:7,3:10:3.48:117,3,0	1/1:10,2:12:5.11:230,5,0	1/1:7,2:9:3.01:116,3,0	1/1:9,1:12:6.02:214,6,0	./.	1/1:22,2:27:10.31:318,10,0	0/0:19,0:18:1.25:0,1,3	0/0:15,0:15:4.05:0,4,13	0/0:18,0:17:12.03:0,12,151	0/0:35,0:37:8.99:0,9,112	./.	1/1:17,1:18:2.96:20,3,0	1/1:33,0:33:6.01:169,6,0	0/0:9,0:9:6.02:0,6,209	./.	1/1:9,5:14:15.05:581,15,0	0/0:12,0:10:2.50:0,2,9
chr10	13243380	.	C	CTCCA	14322.23	PASS	AB=0.535;AC=43;AF=0.768;AN=56;BaseQRankSum=10.663;DP=348;FS=3.065;HRun=0;HaplotypeScore=158.0595;InbreedingCoeff=0.4813;MQ=100.51;MQ0=0;MQRankSum=-12.894;QD=59.93;ReadPosRankSum=7.045;VQSLOD=6.0630;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,120,2505	1/1:0,3:3:9.03:218,9,0	0/0:26,0:26:78.25:0,78,1462	0/0:21,0:21:60.19:0,60,1146	0/1:0,4:6:29.75:159,0,30	1/1:0,8:8:21.07:507,21,0	1/1:0,13:13:39.13:931,39,0	1/1:0,4:8:24.05:442,24,0	1/1:1,9:10:27.09:652,27,0	1/1:1,17:19:54.18:1266,54,0	0/1:0,11:11:99:308,0,162	1/1:0,9:9:27.09:651,27,0	1/1:0,5:5:15.05:361,15,0	1/1:1,19:20:57.20:1370,57,0	1/1:1,13:14:42.14:1017,42,0	1/1:1,11:12:33.11:792,33,0	1/1:5,12:16:39.13:949,39,0	1/1:1,11:11:33.11:807,33,0	1/1:0,8:8:24.08:589,24,0	0/1:0,6:6:90.27:198,0,90	1/1:3,5:8:21.05:390,21,0	0/1:1,11:12:99:438,0,145	0/1:1,4:5:53.97:135,0,54	1/1:1,5:6:12:234,12,0	0/0:21,0:21:63.22:0,63,1321	1/1:0,4:6:18.04:385,18,0	1/1:0,10:10:30.10:722,30,0	1/1:0,11:11:33.11:801,33,0
chr10	13243382	.	G	GAATGGATAC	40175.87	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=11.853;DP=482;FS=9.234;HRun=0;HaplotypeScore=194.3185;InbreedingCoeff=0.9818;MQ=86.44;MQ0=0;MQRankSum=-14.922;QD=108.29;ReadPosRankSum=2.452;VQSLOD=5.1273;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,129,3609	1/1:1,3:4:12.04:510,12,0	0/0:25,0:25:74.96:0,75,1941	0/0:21,0:21:57.06:0,57,1590	1/1:7,4:11:20.10:716,20,0	1/1:4,8:12:33.10:1368,33,0	1/1:13,13:26:69.24:3013,69,0	1/1:13,3:17:35.99:1504,36,0	1/1:5,9:14:39.12:1597,39,0	1/1:7,17:25:66.21:2888,66,0	1/1:4,11:15:45.15:1825,45,0	1/1:6,9:15:45.14:1905,45,0	1/1:6,5:11:30.10:1283,30,0	1/1:6,18:25:72.25:2994,72,0	1/1:8,13:21:60.68:2600,61,0	1/1:7,11:18:54.16:2197,54,0	1/1:12,12:23:46.06:1776,46,0	1/1:9,11:19:57.20:2448,57,0	1/1:6,8:14:39.13:1639,39,0	1/1:1,6:7:21.07:953,21,0	1/1:10,5:15:27.53:1001,28,0	1/1:4,11:15:42.14:1911,42,0	1/1:3,4:7:18.04:709,18,0	1/1:6,5:11:15.05:600,15,0	0/0:21,0:21:63.22:0,63,1866	1/1:10,4:14:33.06:1398,33,0	1/1:3,9:13:36.12:1599,36,0	1/1:6,11:17:48.12:1743,48,0
chr10	13246192	.	G	GA	749.67	PASS	AB=0.563;AC=5;AF=0.089;AN=56;BaseQRankSum=-5.009;DP=532;FS=5.493;HRun=10;HaplotypeScore=67.8806;InbreedingCoeff=0.7031;MQ=67.80;MQ0=10;MQRankSum=-0.040;QD=15.62;ReadPosRankSum=-2.326;VQSLOD=3.4208;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:98.83:0,99,809	0/0:7,0:7:14.97:0,15,122	0/0:25,0:11:12.70:0,13,133	0/0:22,0:12:19.18:0,19,124	0/0:27,0:26:65.89:0,66,539	0/0:16,0:16:43.99:0,44,351	0/0:24,0:21:44.93:0,45,369	0/0:23,0:22:53.43:0,53,417	0/0:17,1:18:3.94:0,4,238	0/0:20,0:20:53.86:0,54,436	0/0:9,0:9:26.97:0,27,222	0/0:8,0:8:20.97:0,21,172	0/0:19,0:19:42.32:0,42,336	0/0:15,0:15:41.88:0,42,335	0/0:18,0:18:47.93:0,48,394	0/0:11,0:11:23.96:0,24,195	0/0:55,0:53:99:0,120,1012	0/0:26,0:26:59.91:0,60,492	1/1:3,15:19:50.67:473,51,0	1/1:3,7:10:17.99:179,18,0	0/1:4,14:17:19.11:226,0,19	0/0:5,0:5:11.98:0,12,98	0/0:13,0:13:32.95:0,33,270	0/0:23,0:23:65.71:0,66,522	0/0:15,0:14:35.16:0,35,276	0/0:21,0:21:56.92:0,57,466	0/0:15,0:14:29.94:0,30,246	0/0:11,0:10:29.97:0,30,246
chr10	13248304	.	AG	A	15185.46	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=13.895;DP=674;FS=2.072;HRun=2;HaplotypeScore=68.3696;InbreedingCoeff=0.9996;MQ=83.85;MQ0=0;MQRankSum=-4.731;QD=35.07;ReadPosRankSum=2.892;VQSLOD=5.5010;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,153,2246	1/1:0,13:13:36.12:464,36,0	0/0:20,0:20:57.18:0,57,821	0/0:23,0:23:65.97:0,66,913	1/1:0,17:17:51.17:662,51,0	0/0:24,0:24:72.23:0,72,1058	0/0:25,0:25:75.19:0,75,1051	1/1:0,35:35:99:1350,105,0	1/1:0,29:29:72.23:935,72,0	1/1:1,25:26:72.21:917,72,0	1/1:1,13:14:39.12:493,39,0	1/1:0,26:26:63.20:818,63,0	1/1:0,32:32:78.23:1013,78,0	1/1:1,13:14:33.11:421,33,0	1/1:0,18:18:45.15:584,45,0	1/1:1,13:14:42.14:541,42,0	1/1:0,35:35:99:1266,99,0	1/1:0,23:23:63.20:818,63,0	0/0:29,0:29:87.24:0,87,1238	0/0:11,0:11:33.09:0,33,469	0/0:40,0:40:99:0,105,1546	1/1:0,15:15:39.03:465,39,0	1/1:0,11:11:27.09:350,27,0	1/1:0,44:44:99:1597,123,0	0/0:18,0:18:51.17:0,51,764	1/1:1,31:32:93.30:1207,93,0	1/1:0,25:25:69.22:895,69,0	1/1:0,10:10:30.10:389,30,0
chr10	13250155	.	T	TCTTCCTTC	14842.58	PASS	AB=1.000;AC=47;AF=0.870;AN=54;BaseQRankSum=-5.081;DP=711;FS=1.182;HRun=0;HaplotypeScore=158.4594;InbreedingCoeff=0.6589;MQ=55.71;MQ0=2;MQRankSum=1.546;QD=23.67;ReadPosRankSum=0.509;VQSLOD=4.2390;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:33:29.94:252,30,0	1/1:5,2:8:18.03:559,18,0	0/0:15,0:9:2.96:0,3,19	./.	1/1:19,9:31:23.84:463,24,0	0/0:5,0:17:9.80:0,10,203	0/0:13,0:31:11.36:0,11,219	0/1:33,0:33:6.23:586,0,6	1/1:10,13:27:27.09:1104,27,0	1/1:8,12:27:36.87:1037,37,0	1/1:10,7:23:20.93:568,21,0	1/1:11,13:32:15.05:614,15,0	1/1:8,6:16:6.02:246,6,0	1/1:10,0:17:17.46:131,17,0	1/1:11,18:30:24.55:981,25,0	1/1:11,10:27:21.07:851,21,0	1/1:30,0:30:11.70:279,12,0	1/1:13,7:22:9.03:369,9,0	1/1:14,0:17:9:86,9,0	1/1:6,0:19:35.86:295,36,0	1/1:12,0:31:35.92:293,36,0	1/1:11,14:30:30.10:1196,30,0	1/1:11,10:26:19.51:616,20,0	1/1:11,21:41:25.88:829,26,0	1/1:18,0:30:23.94:196,24,0	1/1:16,14:36:58.37:1958,58,0	1/1:8,19:28:30.10:1192,30,0	1/1:12,0:12:6:144,6,0
chr10	13250170	.	T	TCCTTCCTT	14244.99	PASS	AB=1.000;AC=47;AF=0.870;AN=54;BaseQRankSum=-5.256;DP=709;FS=1.183;HRun=0;HaplotypeScore=149.9787;InbreedingCoeff=0.6574;MQ=53.10;MQ0=2;MQRankSum=2.167;QD=22.68;ReadPosRankSum=2.083;VQSLOD=4.1958;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:35,0:34:29.94:252,30,0	1/1:8,0:8:15.05:538,15,0	0/0:21,0:11:2.48:0,2,18	./.	1/1:27,0:27:23.84:463,24,0	0/0:17,0:16:9.80:0,10,203	0/0:26,0:26:11.36:0,11,219	0/1:29,0:29:5.50:301,0,6	1/1:29,0:29:27.09:1104,27,0	1/1:22,0:22:36.41:933,36,0	1/1:26,0:26:20.93:568,21,0	1/1:33,0:33:15.05:614,15,0	1/1:12,0:12:6.02:246,6,0	1/1:18,0:18:14.97:122,15,0	1/1:28,0:28:24.55:981,25,0	1/1:30,0:30:21.07:851,21,0	1/1:27,0:27:12.03:324,12,0	1/1:20,0:20:9.03:369,9,0	1/1:12,0:12:10.24:89,10,0	1/1:24,0:24:35.86:295,36,0	1/1:35,0:35:35.92:293,36,0	1/1:35,0:35:30.10:1196,30,0	1/1:30,0:30:19.51:616,20,0	1/1:42,0:42:25.88:829,26,0	1/1:28,0:28:23.45:195,23,0	1/1:35,0:35:55.78:1732,56,0	1/1:29,0:29:30.10:1192,30,0	1/1:7,6:14:6:144,6,0
chr10	13250171	.	C	CCTTCCTTC	14347.58	PASS	AB=1.000;AC=47;AF=0.870;AN=54;BaseQRankSum=-5.199;DP=711;FS=1.190;HRun=0;HaplotypeScore=151.5549;InbreedingCoeff=0.6619;MQ=53.00;MQ0=2;MQRankSum=2.200;QD=22.96;ReadPosRankSum=1.846;VQSLOD=4.6626;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:35,0:34:29.94:252,30,0	1/1:8,0:8:15.05:538,15,0	0/0:23,0:11:2.48:0,2,18	./.	1/1:26,0:26:23.84:463,24,0	0/0:19,0:18:9.80:0,10,203	0/0:26,0:26:11.36:0,11,219	0/1:28,0:28:5.50:301,0,6	1/1:30,0:30:27.09:1104,27,0	1/1:23,0:23:36.41:933,36,0	1/1:26,0:26:20.93:568,21,0	1/1:32,0:32:15.05:614,15,0	1/1:12,0:12:6.02:246,6,0	1/1:18,0:18:14.97:122,15,0	1/1:29,0:29:24.55:981,25,0	1/1:28,0:29:21.07:851,21,0	1/1:20,5:26:12.03:324,12,0	1/1:20,0:20:10.85:374,11,0	1/1:13,0:13:10.24:89,10,0	1/1:25,0:25:35.86:295,36,0	1/1:34,0:34:35.92:293,36,0	1/1:33,0:33:30.10:1196,30,0	1/1:30,0:30:19.51:616,20,0	1/1:42,0:42:28.89:926,29,0	1/1:28,0:28:23.45:195,23,0	1/1:35,0:35:55.78:1732,56,0	1/1:29,0:29:30.10:1192,30,0	1/1:14,0:14:6:144,6,0
chr10	13251397	.	TC	T	2227.81	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-5.724;DP=573;FS=11.678;HRun=1;HaplotypeScore=86.8142;InbreedingCoeff=0.9917;MQ=85.91;MQ0=0;MQRankSum=-2.813;QD=37.13;ReadPosRankSum=3.233;VQSLOD=3.3568;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,46:46:99:1846,132,0	0/0:7,0:7:21.06:0,21,312	0/0:21,0:21:63.21:0,63,999	0/0:27,0:27:64.83:0,65,1010	0/0:12,0:12:36.04:0,36,543	0/0:15,0:15:45.15:0,45,717	0/0:28,0:28:84.26:0,84,1290	0/0:17,0:17:51.17:0,51,795	0/0:13,0:13:39.13:0,39,623	0/0:27,0:27:81.27:0,81,1276	0/0:6,0:6:18.05:0,18,264	0/0:27,0:27:81.28:0,81,1290	0/0:26,0:26:75.26:0,75,1195	0/0:25,0:25:75.23:0,75,1150	0/0:9,0:9:27.07:0,27,408	0/0:15,0:15:45.15:0,45,719	0/0:24,0:24:72.25:0,72,1142	0/0:18,0:18:54.18:0,54,863	0/0:14,0:14:42.13:0,42,650	0/0:9,0:9:24.08:0,24,376	0/0:47,0:47:99:0,141,2221	0/0:11,0:11:33.11:0,33,527	0/0:12,0:12:36.12:0,36,575	0/0:49,0:49:99:0,147,2245	1/1:0,14:14:36.12:504,36,0	0/0:19,0:19:57.19:0,57,910	0/0:23,0:23:69.24:0,69,1103	0/0:12,0:12:33.11:0,33,527
chr10	13251727	.	GTT	G	3722.26	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-2.768;DP=583;FS=14.136;HRun=3;HaplotypeScore=88.6270;InbreedingCoeff=0.8735;MQ=58.11;MQ0=36;MQRankSum=1.350;QD=12.24;ReadPosRankSum=-0.467;VQSLOD=-0.5155;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:87.34:0,87,640	1/1:9,0:8:8.39:73,8,0	0/0:62,0:20:28.10:0,28,381	0/0:78,0:17:7.51:0,8,237	1/1:17,0:16:17.97:148,18,0	0/0:12,0:12:20.03:0,20,164	0/0:18,0:16:26.91:0,27,233	1/1:2,21:23:62.67:493,63,0	1/1:21,0:19:35.07:283,35,0	1/1:16,0:16:40.68:346,41,0	1/1:15,0:15:26.64:222,27,0	1/1:17,0:16:8.53:74,9,0	1/1:16,0:15:13.17:158,13,0	1/1:15,0:14:11.02:106,11,0	1/1:18,0:16:23.97:199,24,0	1/1:13,0:13:23.51:195,24,0	1/1:19,0:19:20.26:233,20,0	1/1:13,0:13:7.97:135,8,0	0/0:15,0:11:29.28:0,29,211	0/0:8,0:8:19.28:0,19,150	0/0:25,0:25:10.17:0,10,502	1/1:10,0:10:11.72:95,12,0	1/1:14,0:13:23.97:201,24,0	1/1:26,0:25:22.05:213,22,0	0/0:12,2:14:25.47:0,25,276	1/1:19,0:19:15.81:322,16,0	1/1:14,0:12:2.02:113,2,0	1/1:9,0:9:3.78:113,4,0
chr10	13251729	.	TTCTCTCTCTCTCTC	T	154.47	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=2.899;DP=609;FS=3.605;HRun=0;HaplotypeScore=194.8683;InbreedingCoeff=0.5497;MQ=56.84;MQ0=39;MQRankSum=-2.811;QD=1.44;ReadPosRankSum=-2.320;VQSLOD=2.5725;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:50:87.26:0,87,2955	0/0:8,0:8:4.78:0,5,191	0/0:62,0:20:0:0,0,0	0/1:77,0:17:0.03:0,0,0	0/0:18,0:17:3.01:0,3,48	1/1:11,1:12:15.63:189,16,0	1/1:10,7:16:2.90:69,3,0	0/0:26,0:26:27.98:0,28,602	0/0:19,0:18:12.51:0,13,293	0/0:15,0:15:17.42:0,17,607	0/0:16,0:16:9.49:0,9,300	0/0:18,0:17:9.03:0,9,566	0/0:16,0:16:26.21:0,26,1045	0/0:18,0:17:14.88:0,15,666	0/0:20,0:18:15.91:0,16,368	0/0:12,0:13:9.03:0,9,429	0/0:17,0:17:18.02:0,18,659	0/0:14,0:13:21:0,21,1080	0/0:18,0:14:13.76:0,14,436	0/0:9,0:9:6.48:0,6,98	0/0:24,0:24:27.09:0,27,1323	0/0:9,0:9:3.01:0,3,145	0/0:19,0:17:12.04:0,12,459	0/0:28,0:25:18.06:0,18,972	0/0:17,0:17:24.55:0,25,1162	0/0:19,0:19:28.34:0,28,1251	0/0:14,0:12:7.56:0,8,402	0/0:10,0:10:13.29:0,13,430
chr10	13251758	.	TCTCTCTCTCTCTCTCACA	T	1137.84	PASS	AC=4;AF=0.074;AN=54;BaseQRankSum=-0.969;DP=478;FS=0.879;HRun=0;HaplotypeScore=179.0193;InbreedingCoeff=0.6361;MQ=40.63;MQ0=24;MQRankSum=-0.023;QD=33.47;ReadPosRankSum=-1.068;VQSLOD=2.8908;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:54:99:0,117,4384	0/0:6,0:5:3.90:0,4,192	./.	0/0:25,0:2:3.01:0,3,43	0/0:18,0:17:3.01:0,3,48	1/1:8,5:13:22.01:681,22,0	1/1:21,0:19:30.03:575,30,0	0/0:20,0:19:55.32:0,55,939	0/0:14,0:12:12.93:0,13,300	0/0:8,0:8:24.08:0,24,987	0/0:14,0:13:9.49:0,9,300	0/0:17,0:16:9.03:0,9,571	0/0:16,0:15:33.53:0,34,1274	0/0:19,0:18:14.88:0,15,670	0/0:18,0:16:15.50:0,15,381	0/0:12,0:11:9.92:0,10,497	0/0:13,0:13:18.02:0,18,730	0/0:15,0:14:27.56:0,28,1311	0/0:18,0:17:27.55:0,28,761	0/0:10,0:10:13.55:0,14,341	0/0:26,0:25:36.70:0,37,1650	0/0:8,0:8:3.01:0,3,145	0/0:17,0:15:15.05:0,15,525	0/0:27,0:23:20.78:0,21,1059	0/0:16,0:16:27.09:0,27,1332	0/0:17,0:16:48.16:0,48,1796	0/0:15,0:12:13.49:0,13,623	0/0:6,0:6:12.51:0,13,523
chr10	13251772	.	T	TCACACACACACA	4753.64	PASS	AB=0.919;AC=31;AF=0.596;AN=52;BaseQRankSum=-4.311;DP=488;FS=2.099;HRun=0;HaplotypeScore=169.6945;InbreedingCoeff=0.6529;MQ=44.34;MQ0=15;MQRankSum=-6.070;QD=17.04;ReadPosRankSum=-2.640;VQSLOD=3.6635;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:52:27.36:0,27,1111	1/1:6,0:6:0.47:1,0,0	0/0:9,0:3:4.57:0,5,100	0/0:16,0:12:26.13:0,26,405	0/0:15,0:14:0:0,0,0	0/0:15,0:15:36.12:0,36,1005	0/0:26,0:26:47.65:0,48,1231	1/1:25,0:24:24.08:627,24,0	1/1:19,0:17:15.03:309,15,0	1/1:11,0:11:20.28:618,20,0	./.	1/1:16,0:15:3.01:75,3,0	1/1:15,0:14:15.33:426,15,0	0/1:20,0:18:0.02:0,0,0	./.	1/1:13,0:12:7.27:215,7,0	1/1:10,7:21:15.05:505,15,0	1/1:9,3:16:11.83:366,12,0	0/0:10,0:9:6.02:0,6,137	0/0:12,0:12:33.57:0,34,951	0/0:24,0:24:38.67:0,39,1056	1/1:12,0:12:3.01:50,3,0	1/1:10,0:8:3.01:55,3,0	0/1:23,5:30:0:0,0,0	0/1:17,0:17:11.04:11,0,173	1/1:21,0:20:30.55:1046,31,0	1/1:20,0:17:15.50:429,16,0	1/1:2,0:2:2.97:20,3,0
chr10	13251778	.	A	ACACACA	2661.14	PASS	AB=1.000;AC=32;AF=0.640;AN=50;BaseQRankSum=0.621;DP=497;FS=0.000;HRun=0;HaplotypeScore=140.3505;InbreedingCoeff=0.6019;MQ=48.42;MQ0=14;MQRankSum=-5.512;QD=7.90;ReadPosRankSum=-2.181;VQSLOD=2.3383;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:57,0:56:1.19:1,0,380	0/1:7,0:7:0:0,0,0	0/0:14,0:6:4.57:0,5,80	0/0:19,0:13:23.63:0,24,279	./.	0/0:16,0:16:37.37:0,37,582	0/0:30,0:28:48.89:0,49,686	1/1:23,0:22:15.52:252,16,0	1/1:17,0:16:15.03:233,15,0	1/1:11,0:11:17.09:293,17,0	./.	1/1:16,0:16:3.01:75,3,0	1/1:16,0:15:15.45:289,15,0	0/1:17,0:15:0.01:0,0,0	./.	1/1:7,5:12:6.91:145,7,0	1/1:23,0:23:14.80:321,15,0	1/1:19,0:18:11.83:252,12,0	0/0:13,0:12:6.02:0,6,82	0/0:11,0:11:33.10:0,33,532	0/0:20,0:20:38.85:0,39,585	1/1:13,0:13:3.01:50,3,0	1/1:11,0:9:3.01:73,3,0	1/1:37,0:33:2.68:18,3,0	0/1:16,0:16:30.94:31,0,45	1/1:18,0:17:24.55:486,25,0	1/1:21,0:18:15.97:291,16,0	1/1:2,0:2:2.97:20,3,0
chr10	13253976	.	CCCACCACCACCA	C	1890.15	PASS	AC=28;AF=0.737;AN=38;BaseQRankSum=-0.170;DP=294;FS=6.537;HRun=0;HaplotypeScore=97.9564;InbreedingCoeff=0.5250;MQ=67.20;MQ0=9;MQRankSum=-2.827;QD=12.95;ReadPosRankSum=-0.465;VQSLOD=1.5061;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:15,5:19:12.04:411,12,0	./.	./.	./.	./.	0/0:6,0:10:9.03:0,9,140	0/0:11,0:13:5.99:0,6,58	./.	1/1:4,0:4:2.80:13,3,0	1/1:14,0:13:3.01:51,3,0	1/1:2,0:2:3.01:103,3,0	1/1:11,4:15:6.02:206,6,0	1/1:4,3:7:6.02:206,6,0	1/1:11,5:16:3.01:103,3,0	1/1:6,2:8:3.01:103,3,0	./.	1/1:13,3:16:3.01:103,3,0	./.	0/0:10,0:13:12.88:0,13,158	0/0:7,0:8:11.92:0,12,187	0/0:29,0:31:24.05:0,24,345	1/1:3,1:4:3.01:103,3,0	1/1:4,0:4:3.01:63,3,0	1/1:12,5:17:9.03:306,9,0	./.	1/1:7,3:10:8.86:152,9,0	1/1:7,2:8:3.01:103,3,0	./.
chr10	13254831	.	T	TC	873.54	PASS	AB=1.000;AC=8;AF=0.143;AN=56;BaseQRankSum=3.998;DP=516;FS=0.691;HRun=4;HaplotypeScore=75.4955;InbreedingCoeff=0.4406;MQ=81.81;MQ0=0;MQRankSum=-0.356;QD=10.28;ReadPosRankSum=-4.226;VQSLOD=-0.1839;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:56.13:0,56,837	0/0:7,0:7:15.04:0,15,170	0/0:18,0:17:42.09:0,42,448	0/0:15,0:15:28.62:0,29,304	0/0:11,0:11:13.62:0,14,168	1/1:8,9:17:30.55:384,31,0	1/1:2,24:26:41.82:574,42,0	0/0:24,0:24:52.01:0,52,564	0/0:18,0:18:45.11:0,45,495	0/0:14,0:14:20.54:0,21,214	0/1:12,0:12:2.65:3,0,214	0/0:34,0:34:81.22:0,81,915	0/0:24,0:24:60.16:0,60,677	0/0:18,0:18:10.13:0,10,286	0/0:19,0:19:48.12:0,48,533	0/0:16,0:16:39.11:0,39,442	0/0:31,0:31:84.21:0,84,940	0/0:24,0:24:57.16:0,57,646	0/0:19,0:19:41.57:0,42,453	0/0:13,0:13:21.51:0,22,229	0/0:31,0:31:44.79:0,45,693	0/1:7,0:7:13.82:14,0,89	0/1:12,0:12:30.50:31,0,146	0/0:25,0:25:75.20:0,75,841	0/1:11,0:11:10.34:10,0,98	0/0:13,0:13:21.90:0,22,226	0/0:17,0:16:34.53:0,35,405	0/0:7,0:7:18.05:0,18,203
chr10	13255046	.	AC	A	1007.75	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.928;DP=481;FS=0.623;HRun=6;HaplotypeScore=52.8261;InbreedingCoeff=0.9863;MQ=77.05;MQ0=0;MQRankSum=-3.676;QD=22.39;ReadPosRankSum=-0.637;VQSLOD=2.4785;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,120,1512	0/0:9,0:9:24.06:0,24,301	0/0:14,2:16:32.04:0,32,404	0/0:14,0:13:24.03:0,24,284	0/0:18,0:18:42.12:0,42,537	1/1:2,12:14:38.13:392,38,0	1/1:10,21:30:72.10:738,72,0	0/0:17,0:17:39.12:0,39,498	0/0:13,0:13:39.13:0,39,512	0/0:15,0:15:45.14:0,45,579	0/0:14,0:14:39.11:0,39,496	0/0:12,0:12:36.10:0,36,459	0/0:13,0:13:39.10:0,39,483	0/0:9,0:9:27.09:0,27,355	0/0:8,0:8:21.07:0,21,271	0/0:11,0:11:33.11:0,33,434	0/0:30,1:31:55.13:0,55,1071	0/0:32,0:32:78.08:0,78,989	0/0:22,0:22:60.15:0,60,745	0/0:7,0:7:18.05:0,18,226	0/0:23,0:23:54.18:0,54,708	0/0:16,0:16:42.10:0,42,520	0/0:14,0:14:42.13:0,42,544	0/0:13,0:13:30.10:0,30,394	0/0:16,0:16:42.08:0,42,531	0/0:19,0:19:51.17:0,51,669	0/0:23,0:23:63.19:0,63,814	0/0:7,0:7:18.06:0,18,236
chr10	13255081	.	AT	A	1104.18	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.692;DP=404;FS=1.462;HRun=3;HaplotypeScore=46.8873;InbreedingCoeff=0.9179;MQ=61.64;MQ0=4;MQRankSum=-2.482;QD=24.54;ReadPosRankSum=-1.044;VQSLOD=2.6955;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,99,1379	0/0:6,0:6:15.05:0,15,216	0/0:10,0:8:18.06:0,18,248	0/0:11,0:8:21.54:0,22,285	0/0:14,0:14:33.11:0,33,475	1/1:1,19:20:42.13:520,42,0	1/1:4,21:24:57.18:706,57,0	0/0:21,0:21:60.19:0,60,843	0/0:12,0:12:33.11:0,33,475	0/0:17,0:17:51.17:0,51,729	0/0:9,0:9:27.08:0,27,364	0/0:12,0:12:27.09:0,27,388	0/0:12,0:12:36.12:0,36,505	0/0:8,0:8:24.08:0,24,346	0/0:6,0:6:15.05:0,15,216	0/0:12,0:12:36.12:0,36,511	0/0:32,0:32:81.24:0,81,1127	0/0:26,0:25:72.22:0,72,1016	0/0:22,0:21:57.18:0,57,804	0/0:2,0:2:6.02:0,6,86	0/0:17,0:16:45.06:0,45,593	0/0:9,0:9:24.08:0,24,346	0/0:13,0:13:36.08:0,36,495	0/0:8,0:8:21.06:0,21,284	0/0:10,0:10:21.05:0,21,282	0/0:14,0:14:39.13:0,39,561	0/0:15,0:15:42.14:0,42,605	0/0:6,0:6:18.06:0,18,259
chr10	13255146	.	GA	G	79.17	PASS	AB=0.953;AC=18;AF=0.321;AN=56;BaseQRankSum=0.186;DP=474;FS=6.820;HRun=16;HaplotypeScore=90.4092;InbreedingCoeff=-0.1213;MQ=54.22;MQ0=29;MQRankSum=-1.485;QD=0.33;ReadPosRankSum=3.753;VQSLOD=-0.6929;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:36:40.49:0,40,175	1/1:7,0:6:1.52:4,2,0	0/1:21,0:6:1.99:2,0,3	0/0:18,0:5:4.50:0,5,40	0/1:18,0:18:4.34:4,0,42	0/1:19,1:20:7.30:7,0,60	0/1:19,2:19:14.46:14,0,84	0/0:21,0:20:13.74:0,14,80	0/0:10,0:11:5.79:0,6,32	0/0:16,0:17:3.87:0,4,22	0/1:7,1:9:18.83:24,0,19	0/0:24,0:23:2.67:0,3,47	0/0:10,0:10:2.03:0,2,25	0/0:15,0:17:16.05:0,16,80	0/1:15,0:15:15.19:19,0,15	0/1:11,4:15:29.91:30,0,43	0/0:24,0:24:1.52:0,2,39	0/1:24,0:23:31.12:31,0,33	0/1:13,0:13:11.19:11,0,62	0/0:10,0:10:16.14:0,16,68	0/0:16,0:15:16.66:0,17,70	0/0:10,1:11:2.73:0,3,40	0/1:14,0:14:1.51:2,0,2	1/1:14,0:14:3.23:12,3,0	0/0:14,0:14:8.04:0,8,34	0/1:16,0:16:12.88:19,0,13	0/1:21,1:22:14.12:14,0,67	1/1:9,0:8:0.86:23,1,0
chr10	13255158	.	A	AG	111	PASS	AB=0.710;AC=3;AF=0.054;AN=56;BaseQRankSum=-1.698;DP=500;FS=3.312;HRun=0;HaplotypeScore=97.2845;InbreedingCoeff=0.4584;MQ=65.31;MQ0=6;MQRankSum=2.322;QD=2.77;ReadPosRankSum=-1.997;VQSLOD=2.6343;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:39:56.62:0,57,492	0/0:9,0:9:8.45:0,8,53	0/0:17,0:11:12.08:0,12,142	0/0:13,0:9:11.10:0,11,94	0/0:18,0:18:18.51:0,19,211	1/1:10,8:17:20.21:118,20,0	0/1:13,9:21:88.20:96,0,88	0/0:33,0:32:16.08:0,16,235	0/0:11,0:11:16.93:0,17,98	0/0:20,0:19:32.99:0,33,230	0/0:8,0:8:14.44:0,14,116	0/0:24,0:23:23.06:0,23,153	0/0:12,0:12:18.91:0,19,130	0/0:19,0:18:30.71:0,31,199	0/0:13,0:13:18.59:0,19,148	0/0:15,0:15:31.30:0,31,190	0/0:24,0:24:40.52:0,41,307	0/0:23,0:23:43.68:0,44,303	0/0:16,0:16:40.33:0,40,286	0/0:14,0:14:30.94:0,31,205	0/0:21,0:20:24.72:0,25,204	0/0:10,0:10:27.76:0,28,231	0/0:13,0:13:19.56:0,20,123	0/0:14,0:14:23.75:0,24,178	0/0:16,0:16:17.87:0,18,142	0/0:16,0:16:7.54:0,8,149	0/0:30,0:29:40.83:0,41,258	0/0:10,0:10:1.27:0,1,112
chr10	13255160	.	A	AAG	7297.69	PASS	AB=0.604;AC=50;AF=0.893;AN=56;BaseQRankSum=-5.389;DP=501;FS=1.461;HRun=0;HaplotypeScore=88.9348;InbreedingCoeff=0.4872;MQ=65.99;MQ0=4;MQRankSum=-0.315;QD=15.49;ReadPosRankSum=5.067;VQSLOD=4.7885;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,29:39:40.23:562,40,0	1/1:2,6:8:2.61:45,3,0	0/0:17,0:11:31.75:0,32,228	0/0:13,0:9:16.13:0,16,122	1/1:13,4:18:28.87:317,29,0	1/1:7,0:14:35.94:421,36,0	1/1:11,1:20:41.38:500,41,0	1/1:10,26:37:53.73:655,54,0	1/1:6,0:12:6.75:76,7,0	1/1:6,14:20:42.55:400,43,0	1/1:7,1:8:16.82:153,17,0	0/1:6,12:23:6.27:185,0,6	1/1:10,2:12:11.45:118,11,0	0/1:8,7:18:19.03:106,0,19	1/1:4,10:14:20.03:224,20,0	1/1:10,2:15:12.50:186,13,0	1/1:5,17:23:30.52:435,31,0	1/1:5,17:23:10.68:368,11,0	1/1:5,12:18:23.65:373,24,0	1/1:1,13:15:32.66:321,33,0	1/1:4,15:19:17.94:270,18,0	1/1:7,3:10:19.89:236,20,0	1/1:4,8:13:0.83:96,1,0	1/1:1,11:13:23.96:355,24,0	1/1:4,10:15:8.82:108,9,0	1/1:2,13:16:36.11:314,36,0	1/1:23,4:30:30.65:315,31,0	1/1:9,0:10:18.88:160,19,0
chr10	13255162	.	AG	A	2814.27	PASS	AB=1.000;AC=39;AF=0.696;AN=56;BaseQRankSum=-0.132;DP=481;FS=12.982;HRun=1;HaplotypeScore=84.2484;InbreedingCoeff=0.8840;MQ=70.36;MQ0=3;MQRankSum=-1.553;QD=8.58;ReadPosRankSum=-1.666;VQSLOD=-0.4727;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:35:47.83:0,48,405	1/1:8,0:8:6.82:46,7,0	0/0:19,0:13:15.82:0,16,168	0/1:14,0:10:1.56:2,0,98	1/1:17,1:18:26.21:158,26,0	0/0:14,0:13:30.44:0,30,256	0/0:21,0:20:47.14:0,47,387	1/1:35,1:35:66.65:620,67,0	1/1:10,0:10:11.13:63,11,0	1/1:21,0:20:45.01:296,45,0	1/1:9,0:9:17.37:83,17,0	1/1:23,1:24:17.61:106,18,0	1/1:10,0:10:11.87:57,12,0	1/1:19,0:18:16.37:89,16,0	1/1:13,0:13:17.43:74,17,0	1/1:13,0:13:11.10:98,11,0	1/1:23,0:23:39.37:216,39,0	1/1:24,0:24:33.42:176,33,0	0/0:17,0:17:44.96:0,45,331	0/0:14,1:15:35.59:0,36,266	0/0:21,0:21:23.28:0,23,199	1/1:10,0:10:8.13:110,8,0	1/1:10,0:10:10.45:53,10,0	1/1:13,0:13:26.09:152,26,0	0/0:10,0:10:9.01:0,9,81	1/1:15,0:15:33.38:243,33,0	1/1:30,1:30:37.40:226,37,0	1/1:6,1:7:20.47:155,20,0
chr10	13255163	.	G	GAAA	8653.04	PASS	AB=1.000;AC=44;AF=0.786;AN=56;BaseQRankSum=-4.967;DP=483;FS=17.023;HRun=16;HaplotypeScore=82.0510;InbreedingCoeff=0.3538;MQ=70.57;MQ0=2;MQRankSum=-2.510;QD=19.62;ReadPosRankSum=2.856;VQSLOD=2.3288;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:35,0:34:44.14:63,0,44	1/1:7,0:7:8.96:99,9,0	0/0:18,0:13:35.01:0,35,386	0/0:13,0:10:15.66:0,16,203	1/1:8,10:18:35.81:558,36,0	0/1:14,0:13:9.12:11,0,9	0/1:22,0:21:20.58:21,0,131	1/1:37,1:37:88.49:1377,88,0	1/1:10,0:10:14.95:165,15,0	1/1:21,0:20:48.13:759,48,0	1/1:3,6:10:23.89:299,24,0	1/1:24,0:24:23.97:315,24,0	1/1:3,7:10:11.71:200,12,0	1/1:18,0:17:29.11:271,29,0	1/1:12,1:13:23.87:328,24,0	1/1:13,0:13:31.60:351,32,0	1/1:22,1:23:42.33:647,42,0	1/1:24,0:24:47.42:581,47,0	0/1:17,0:17:74.79:75,0,84	0/1:15,0:15:11.39:58,0,11	0/1:21,0:21:1.07:1,0,47	1/1:8,2:10:27.01:450,27,0	1/1:10,0:10:11.90:148,12,0	1/1:13,0:13:27.04:438,27,0	0/0:10,0:10:0.11:0,0,9	1/1:16,0:16:39.51:590,40,0	1/1:13,18:31:44.32:570,44,0	1/1:7,0:7:21:281,21,0
chr10	13257872	.	CA	C	7517.82	PASS	AB=0.857;AC=43;AF=0.768;AN=56;BaseQRankSum=-10.705;DP=609;FS=3.767;HRun=11;HaplotypeScore=78.5153;InbreedingCoeff=0.8132;MQ=61.03;MQ0=4;MQRankSum=3.537;QD=16.03;ReadPosRankSum=3.960;VQSLOD=5.7828;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:47:82.77:0,83,431	1/1:3,4:7:8.98:74,9,0	0/1:5,1:4:33.53:34,0,44	0/0:11,1:9:17.95:0,18,159	1/1:5,22:27:27.25:331,27,0	1/1:2,13:15:23.04:258,23,0	1/1:6,20:26:50.91:419,51,0	1/1:7,17:23:44.82:361,45,0	1/1:2,16:18:18.96:362,19,0	1/1:4,16:20:44.90:364,45,0	1/1:3,16:19:23.91:197,24,0	1/1:2,13:16:35:277,35,0	1/1:4,13:19:31.98:252,32,0	1/1:2,14:18:40.02:307,40,0	1/1:1,21:24:61.01:480,61,0	1/1:2,14:16:38.94:320,39,0	1/1:3,32:35:63.89:732,64,0	1/1:3,25:28:42.92:473,43,0	0/0:11,0:29:66.59:0,67,400	0/0:5,0:9:17.29:0,17,95	0/0:7,0:24:39.04:0,39,213	1/1:5,12:16:4.31:239,4,0	1/1:4,14:18:32.89:271,33,0	1/1:5,32:40:61.02:675,61,0	0/0:9,0:18:23.47:0,23,156	1/1:10,14:25:0.05:258,0,0	1/1:1,23:25:55.97:449,56,0	1/1:7,18:23:21.94:387,22,0
chr10	13258195	.	T	TA	3114.11	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-12.075;DP=770;FS=5.636;HRun=2;HaplotypeScore=98.3496;InbreedingCoeff=0.9999;MQ=60.76;MQ0=1;MQRankSum=1.663;QD=34.22;ReadPosRankSum=-1.027;VQSLOD=3.1509;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,120,1487	0/0:13,0:13:33.10:0,33,409	0/0:39,0:29:81.19:0,81,961	0/0:24,0:23:64.22:0,64,732	0/0:39,0:39:99:0,108,1325	0/0:23,0:23:69.22:0,69,854	0/0:30,0:30:90.28:0,90,1114	0/0:29,0:29:87.26:0,87,1065	0/0:28,0:28:81.25:0,81,1003	0/0:31,0:31:87.26:0,87,1067	0/0:28,0:28:84.26:0,84,1041	0/0:19,0:19:57.18:0,57,707	0/0:16,0:16:45.14:0,45,558	0/0:19,0:19:57.18:0,57,706	0/0:21,0:21:60.19:0,60,744	0/0:26,0:26:78.25:0,78,967	0/0:26,0:26:74.25:0,74,885	0/0:43,0:43:99:0,129,1599	1/1:6,29:35:87.29:1251,87,0	1/1:2,18:20:54.14:753,54,0	1/1:3,33:36:87.29:1253,87,0	0/0:23,0:23:69.20:0,69,838	0/0:34,0:34:99:0,102,1264	0/0:30,0:30:87.26:0,87,1063	0/0:30,0:30:87.24:0,87,1050	0/0:17,0:17:51.16:0,51,632	0/0:28,0:27:72.23:0,72,892	0/0:20,0:20:60.19:0,60,743
chr10	13258606	.	CA	C	23333.24	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=11.583;DP=782;FS=8.088;HRun=2;HaplotypeScore=114.8139;InbreedingCoeff=0.9981;MQ=80.61;MQ0=0;MQRankSum=-5.783;QD=36.63;ReadPosRankSum=5.041;VQSLOD=4.1133;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,52:53:99:1948,150,0	1/1:0,7:7:18.06:234,18,0	0/0:22,0:22:57.15:0,57,756	0/0:17,0:18:42.13:0,42,585	1/1:0,21:21:60.19:779,60,0	1/1:0,13:13:39.13:506,39,0	1/1:0,28:28:81.26:1050,81,0	1/1:1,38:39:99:1468,114,0	1/1:1,36:37:96.31:1246,96,0	1/1:0,42:42:99:1597,123,0	1/1:1,21:22:57.19:739,57,0	1/1:0,28:28:81.26:1051,81,0	1/1:0,30:30:81.26:1052,81,0	1/1:0,23:23:66.21:857,66,0	1/1:1,33:34:93.30:1200,93,0	1/1:0,27:27:72.23:935,72,0	1/1:1,39:40:99:1480,114,0	1/1:0,14:14:42.14:545,42,0	0/0:22,0:22:66.21:0,66,968	0/0:18,0:18:54.18:0,54,809	0/0:65,0:65:99:0,193,2792	1/1:0,21:21:57.19:740,57,0	1/1:1,16:17:42.14:545,42,0	1/1:1,38:39:99:1480,114,0	1/1:0,20:20:54.18:701,54,0	1/1:0,34:34:99:1309,102,0	1/1:0,36:36:99:1402,108,0	1/1:0,12:12:36.12:467,36,0
chr10	13261271	.	A	AAG	16503.30	PASS	AB=1.000;AC=46;AF=0.821;AN=56;BaseQRankSum=10.574;DP=694;FS=0.449;HRun=0;HaplotypeScore=227.5761;InbreedingCoeff=0.7602;MQ=71.51;MQ0=0;MQRankSum=-9.273;QD=29.06;ReadPosRankSum=2.706;VQSLOD=5.4224;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:96.22:0,96,1176	1/1:2,8:10:30.10:478,30,0	0/0:29,0:27:42.82:0,43,475	0/0:37,0:32:26.27:0,26,300	1/1:14,18:32:42.14:662,42,0	0/1:24,0:24:57.43:57,0,154	0/1:18,0:18:9.64:10,0,156	1/1:18,14:32:63.16:916,63,0	1/1:9,13:22:39.12:615,39,0	1/1:9,10:19:36.12:563,36,0	1/1:6,12:18:39.12:585,39,0	1/1:4,16:20:45.15:736,45,0	1/1:7,25:32:63.21:1002,63,0	1/1:7,17:24:45.15:738,45,0	1/1:7,31:38:47.97:1013,48,0	1/1:4,12:16:33.11:541,33,0	1/1:10,16:26:51.16:788,51,0	1/1:7,14:21:51.17:821,51,0	1/1:8,8:16:36.11:543,36,0	1/1:13,23:36:68.73:1271,69,0	1/1:10,12:22:36.11:566,36,0	1/1:11,7:18:9.96:352,10,0	1/1:9,14:23:38.98:639,39,0	1/1:3,18:21:45.15:725,45,0	0/0:20,0:20:51.04:0,51,589	1/1:15,15:30:67.78:1031,68,0	1/1:11,24:34:81.28:1313,81,0	1/1:4,11:15:33.11:541,33,0
chr10	13261284	.	C	CGA	16598.07	PASS	AB=1.000;AC=47;AF=0.839;AN=56;BaseQRankSum=8.047;DP=632;FS=7.525;HRun=0;HaplotypeScore=213.8999;InbreedingCoeff=0.8681;MQ=67.49;MQ0=1;MQRankSum=-8.568;QD=32.61;ReadPosRankSum=5.426;VQSLOD=5.0999;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:91.51:0,92,647	1/1:11,0:11:24.55:382,25,0	0/0:25,0:23:46.30:0,46,627	0/0:40,0:32:63.82:0,64,776	1/1:26,0:26:36.12:589,36,0	1/1:7,12:19:45.54:645,46,0	1/1:11,7:18:22.09:576,22,0	1/1:31,0:31:55.45:810,55,0	1/1:22,0:22:38.55:605,39,0	1/1:17,0:17:33.49:521,33,0	1/1:20,0:20:18.24:533,18,0	1/1:18,0:18:41.61:682,42,0	1/1:27,0:27:56.64:918,57,0	1/1:19,0:19:45.15:737,45,0	1/1:32,0:32:47.07:1011,47,0	1/1:14,0:14:33.09:541,33,0	1/1:22,0:22:48.15:764,48,0	1/1:18,0:18:45.10:724,45,0	1/1:21,0:21:27.36:405,27,0	1/1:34,0:34:60.40:1225,60,0	1/1:16,0:16:36.08:560,36,0	0/1:11,0:11:14.65:317,0,15	1/1:21,0:21:38.98:640,39,0	1/1:17,0:17:45.15:727,45,0	0/0:20,0:20:50.21:0,50,340	1/1:26,0:26:56.08:863,56,0	1/1:34,0:33:82.12:1284,82,0	1/1:15,0:15:33.11:541,33,0
chr10	13261331	.	TAAAAAAA	T	14794.25	PASS	AB=0.964;AC=45;AF=0.804;AN=56;BaseQRankSum=1.356;DP=510;FS=9.165;HRun=14;HaplotypeScore=188.3197;InbreedingCoeff=0.9111;MQ=58.16;MQ0=1;MQRankSum=-10.102;QD=36.17;ReadPosRankSum=1.184;VQSLOD=1.6381;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:28:72.23:0,72,1679	1/1:1,13:14:33.08:684,33,0	0/0:17,0:9:17.82:0,18,417	0/1:26,0:15:1.81:2,0,695	1/1:4,19:23:41.92:800,42,0	0/0:9,0:16:45.14:0,45,1086	0/0:2,0:15:24.08:0,24,624	1/1:7,31:38:92.92:1544,93,0	1/1:5,18:23:44.97:876,45,0	1/1:6,26:32:78.08:1548,78,0	1/1:2,17:19:45.02:894,45,0	1/1:5,4:9:17.88:268,18,0	1/1:6,5:11:26.67:418,27,0	1/1:3,6:9:20.96:406,21,0	1/1:8,10:18:44.77:640,45,0	1/1:5,4:9:14.98:323,15,0	1/1:4,20:24:27.05:555,27,0	1/1:9,6:15:35.89:496,36,0	1/1:5,15:20:44.95:743,45,0	1/1:5,19:24:53.79:938,54,0	1/1:3,5:8:11.97:204,12,0	1/1:5,5:10:23.75:328,24,0	1/1:3,12:15:29.66:570,30,0	1/1:7,2:9:11.85:163,12,0	0/0:6,0:23:60.20:0,60,1550	1/1:4,19:23:54.08:1062,54,0	1/1:4,17:21:45.01:878,45,0	1/1:1,7:8:21.06:453,21,0
chr10	13261514	.	T	TCCCAG	27206.41	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=5.633;DP=512;FS=1.951;HRun=0;HaplotypeScore=165.4003;InbreedingCoeff=0.9910;MQ=84.88;MQ0=2;MQRankSum=-10.649;QD=60.19;ReadPosRankSum=3.947;VQSLOD=5.5729;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,31:35:84.24:2165,84,0	1/1:2,6:8:21.04:503,21,0	0/0:30,0:30:48.84:0,49,1496	0/0:29,0:30:38.36:0,38,1172	1/1:3,18:21:24.07:569,24,0	1/1:6,10:16:45.13:1022,45,0	1/1:3,17:20:54.17:1364,54,0	1/1:6,21:27:78.25:1995,78,0	1/1:4,9:13:27.09:720,27,0	1/1:8,10:18:48.14:1172,48,0	1/1:6,11:17:36.08:814,36,0	1/1:4,13:17:51.16:1255,51,0	1/1:4,14:18:48.15:1207,48,0	1/1:2,8:10:24.08:638,24,0	1/1:4,13:17:45.15:1182,45,0	1/1:2,18:20:60.19:1566,60,0	1/1:2,13:15:42.10:1029,42,0	1/1:3,12:15:45.15:1130,45,0	1/1:8,11:19:48.15:1258,48,0	1/1:5,14:18:45.14:1095,45,0	1/1:12,12:23:38.89:884,39,0	1/1:2,7:9:21.06:502,21,0	1/1:2,17:19:39.13:1032,39,0	1/1:4,18:21:23.65:634,24,0	1/1:4,15:19:42.14:1114,42,0	1/1:1,9:10:30.10:785,30,0	1/1:5,8:13:36.12:840,36,0	1/1:1,10:11:27:731,27,0
chr10	13261517	.	T	TG	12905.18	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=8.825;DP=525;FS=3.277;HRun=0;HaplotypeScore=193.2993;InbreedingCoeff=0.9951;MQ=83.81;MQ0=2;MQRankSum=-10.751;QD=27.75;ReadPosRankSum=6.114;VQSLOD=4.3304;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,32:34:81.13:887,81,0	1/1:2,6:8:24.07:285,24,0	0/0:30,0:30:82.17:0,82,1149	0/0:30,0:30:68.46:0,68,833	1/1:0,20:20:36.29:338,36,0	1/1:2,17:19:42.11:503,42,0	1/1:4,22:26:59.53:650,60,0	1/1:9,26:35:99:1246,99,0	1/1:2,11:13:36.10:419,36,0	1/1:2,10:12:31.52:347,32,0	1/1:3,12:15:34.32:383,34,0	1/1:4,16:20:60.17:723,60,0	1/1:0,17:17:48.13:554,48,0	1/1:2,10:12:30.08:347,30,0	1/1:6,14:20:53.51:600,54,0	1/1:2,19:21:60.64:654,61,0	1/1:3,13:16:32.92:416,33,0	1/1:2,13:15:36.37:465,36,0	1/1:0,13:13:36.09:424,36,0	1/1:2,16:17:42.12:528,42,0	1/1:5,17:21:24.28:341,24,0	1/1:0,10:10:24.07:296,24,0	1/1:1,17:18:41.15:471,41,0	1/1:3,23:25:39.67:397,40,0	1/1:3,15:18:51.12:589,51,0	1/1:2,9:11:30.08:333,30,0	1/1:5,9:14:28.21:318,28,0	1/1:2,10:12:33.10:393,33,0
chr10	13262698	.	C	CCTTCCATACCTGTCT	5386.64	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=2.548;DP=602;FS=3.424;HRun=0;HaplotypeScore=244.8443;InbreedingCoeff=0.8162;MQ=77.09;MQ0=0;MQRankSum=-8.481;QD=96.19;ReadPosRankSum=-2.908;VQSLOD=3.9818;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,8:23:45.15:2717,45,0	0/0:11,0:11:33.11:0,33,1462	0/0:17,0:17:42.09:0,42,1409	0/1:13,0:13:6.05:6,0,921	0/0:16,0:16:48.16:0,48,2025	0/0:19,0:19:51.18:0,51,2128	0/0:23,0:23:63.22:0,63,2638	0/0:28,0:28:75.24:0,75,2839	0/0:24,0:23:66.23:0,66,2685	0/0:17,0:17:51.18:0,51,2032	0/0:9,0:9:24.08:0,24,1004	0/0:30,0:30:90.30:0,90,3550	0/0:21,0:21:60.21:0,60,2530	0/0:33,0:33:93.32:0,93,3913	0/0:13,0:13:36.10:0,36,1296	0/0:19,0:19:57.20:0,57,2266	0/0:26,0:26:75.20:0,75,3016	0/0:30,0:30:81.26:0,81,3453	0/0:20,0:20:57.20:0,57,2364	0/0:16,0:16:45.15:0,45,1912	0/0:62,0:62:99:0,163,6584	0/0:14,0:14:39.13:0,39,1645	0/0:20,0:20:60.19:0,60,2254	0/0:27,0:27:75.20:0,75,3002	1/1:16,4:20:42.14:2664,42,0	0/0:26,0:26:75.24:0,75,2856	0/0:16,0:15:45.15:0,45,1964	0/0:9,0:9:27.09:0,27,1155
chr10	13263502	.	G	GA	2114.25	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=1.166;DP=643;FS=0.476;HRun=8;HaplotypeScore=70.9540;InbreedingCoeff=0.9972;MQ=69.98;MQ0=0;MQRankSum=-4.875;QD=27.46;ReadPosRankSum=3.039;VQSLOD=4.2637;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,52:54:99:1514,135,0	0/0:10,0:10:24.01:0,24,220	0/0:24,0:22:45.39:0,45,405	0/0:18,0:18:22.07:0,22,186	0/0:25,0:25:69.04:0,69,631	0/0:17,0:17:51.03:0,51,467	0/0:24,0:24:60.02:0,60,549	0/0:40,0:40:93.04:0,93,851	0/0:22,0:22:63.03:0,63,576	0/0:28,0:28:75.02:0,75,683	0/0:14,0:14:42.01:0,42,380	0/0:22,0:22:38.54:0,39,524	0/0:23,0:23:65.98:0,66,591	0/0:20,0:20:51.01:0,51,462	0/0:18,0:18:54.03:0,54,494	0/0:22,0:22:63.03:0,63,577	0/0:30,0:30:87.05:0,87,796	0/0:14,0:14:42.02:0,42,383	0/0:17,0:17:45.02:0,45,412	0/0:20,0:20:47.77:0,48,439	0/0:26,0:26:72.04:0,72,659	0/0:22,0:22:63.03:0,63,576	0/0:21,0:21:54.02:0,54,494	0/0:30,0:30:84.02:0,84,762	1/1:2,21:23:63.18:722,63,0	0/0:25,0:25:63.03:0,63,576	0/0:20,0:20:51.02:0,51,467	0/0:14,0:14:42.02:0,42,384
chr10	13263581	.	GCTGTACACTAGGA	G	4061.52	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.633;DP=698;FS=44.268;HRun=0;HaplotypeScore=255.8956;InbreedingCoeff=0.9997;MQ=73.91;MQ0=0;MQRankSum=-9.406;QD=86.42;ReadPosRankSum=1.433;VQSLOD=1.7298;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,24:31:66.23:2561,66,0	0/0:10,0:10:30.10:0,30,1905	0/0:22,0:22:66.16:0,66,3290	0/0:21,0:20:60.11:0,60,3325	0/0:27,0:27:75.26:0,75,4500	0/0:21,0:21:60.21:0,60,3489	0/0:43,0:43:99:0,123,7693	0/0:24,0:24:72.25:0,72,3789	0/0:33,0:33:96.33:0,96,6097	0/0:18,0:18:54.19:0,54,3227	0/0:16,0:16:48.16:0,48,2877	0/0:29,0:29:87.28:0,87,5430	0/0:24,0:24:66.23:0,66,4246	0/0:25,0:25:72.25:0,72,4451	0/0:28,0:28:72.25:0,72,4404	0/0:26,0:26:78.27:0,78,4879	0/0:33,0:33:93.32:0,93,6016	0/0:19,0:19:57.20:0,57,3775	0/0:18,0:18:48.16:0,48,2809	0/0:20,0:20:60.19:0,60,3234	0/0:50,0:50:99:0,151,9597	0/0:28,0:28:78.25:0,78,4368	0/0:14,0:14:39.12:0,39,2254	0/0:37,0:37:99:0,108,6810	1/1:2,14:16:39.13:1500,39,0	0/0:24,0:24:72.23:0,72,4114	0/0:24,0:24:63.17:0,63,3734	0/0:17,0:17:51.16:0,51,2769
chr10	13263710	.	TAC	T	2752.65	PASS	AB=0.796;AC=40;AF=0.800;AN=50;BaseQRankSum=0.328;DP=686;FS=1.273;HRun=0;HaplotypeScore=103.6692;InbreedingCoeff=-0.1718;MQ=53.47;MQ0=18;MQRankSum=1.477;QD=4.88;ReadPosRankSum=1.428;VQSLOD=2.8534;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:35:10.14:10,0,20	0/1:7,0:6:24.90:25,0,35	./.	./.	1/1:19,6:24:8.94:72,9,0	1/1:20,1:24:5.70:46,6,0	1/1:20,11:30:11.90:130,12,0	./.	0/1:25,4:30:4.55:245,0,5	1/1:10,7:18:5.51:169,6,0	1/1:9,4:13:5.87:52,6,0	0/1:19,4:23:16.01:176,0,16	1/1:17,8:25:11.62:130,12,0	1/1:18,2:20:29.41:239,29,0	1/1:20,10:30:17.46:148,17,0	1/1:18,10:28:44.98:453,45,0	1/1:24,6:31:17.35:281,17,0	0/1:14,14:28:17.69:212,0,18	1/1:22,0:27:9.57:52,10,0	0/1:10,0:25:6.22:29,0,6	0/0:31,0:41:0.47:0,0,1	0/1:17,6:23:26.94:93,0,27	1/1:14,5:20:5.81:45,6,0	1/1:28,10:38:6.02:66,6,0	1/1:10,0:18:8.25:38,8,0	1/1:15,0:15:2.29:31,2,0	0/1:14,2:16:23.30:105,0,23	1/1:5,0:4:3.01:31,3,0
chr10	13263959	.	GCCTTCTCT	G	1203.65	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.542;DP=697;FS=0.000;HRun=0;HaplotypeScore=168.0286;InbreedingCoeff=0.9964;MQ=86.52;MQ0=0;MQRankSum=-6.797;QD=22.71;ReadPosRankSum=-0.182;VQSLOD=2.7113;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,31:37:27.09:755,27,0	0/0:11,0:11:33.11:0,33,1341	0/0:19,0:19:51.07:0,51,2053	0/0:29,0:29:81.25:0,81,2724	0/0:23,0:23:63.22:0,63,2482	0/0:18,0:18:54.17:0,54,2110	0/0:24,0:24:69.21:0,69,2675	0/0:23,0:23:59.85:0,60,2359	0/0:30,0:30:90.31:0,90,3818	0/0:25,0:25:72.25:0,72,3022	0/0:9,0:9:27.09:0,27,1028	0/0:33,0:33:93.32:0,93,3886	0/0:25,0:25:72.25:0,72,3127	0/0:35,0:35:99:0,102,4239	0/0:39,0:39:99:0,108,4607	0/0:23,0:23:69.24:0,69,2910	0/0:38,0:38:99:0,108,4474	0/0:21,0:21:63.22:0,63,2690	0/0:11,0:11:30.10:0,30,1165	0/0:16,0:16:45.15:0,45,1939	0/0:50,0:50:99:0,151,6219	0/0:17,0:17:48.16:0,48,1964	0/0:18,0:18:51.18:0,51,2132	0/0:40,0:40:99:0,117,4916	1/1:1,14:15:21.07:569,21,0	0/0:35,0:35:99:0,105,4420	0/0:19,0:18:54.19:0,54,2159	0/0:13,0:13:39.12:0,39,1387
chr10	13265413	.	C	CT	1822.10	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-7.988;DP=712;FS=1.931;HRun=2;HaplotypeScore=69.5691;InbreedingCoeff=0.9975;MQ=94.99;MQ0=0;MQRankSum=-3.437;QD=32.54;ReadPosRankSum=2.419;VQSLOD=3.7171;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,34:39:93.31:1339,93,0	0/0:8,0:8:21.07:0,21,260	0/0:30,0:30:78.10:0,78,869	0/0:36,0:37:90.13:0,90,1013	0/0:35,0:35:81.25:0,81,1003	0/0:23,0:23:69.22:0,69,855	0/0:26,0:26:75.24:0,75,930	0/0:12,0:12:30.09:0,30,361	0/0:26,0:26:75.24:0,75,929	0/0:30,0:30:87.27:0,87,1069	0/0:18,0:18:54.15:0,54,653	0/0:27,0:27:81.25:0,81,1004	0/0:24,0:24:69.22:0,69,854	0/0:27,0:27:75.22:0,75,916	0/0:29,0:29:87.26:0,87,1065	0/0:18,0:18:54.14:0,54,654	0/0:23,0:23:69.22:0,69,855	0/0:21,0:21:60.13:0,60,711	0/0:22,0:22:60.16:0,60,709	0/0:25,0:25:69.20:0,69,842	0/0:47,0:47:99:0,135,1673	0/0:18,0:18:48.14:0,48,582	0/0:22,0:22:66.21:0,66,809	0/0:33,0:33:96.30:0,96,1187	1/1:0,17:17:42.14:604,42,0	0/0:23,0:23:66.18:0,66,782	0/0:41,0:41:99:0,117,1435	0/0:11,0:11:33.10:0,33,409
chr10	13265707	.	TTTTA	T	3459.69	PASS	AB=0.988;AC=27;AF=0.482;AN=56;BaseQRankSum=8.747;DP=334;FS=15.475;HRun=0;HaplotypeScore=86.2825;InbreedingCoeff=-0.3610;MQ=61.59;MQ0=11;MQRankSum=-9.357;QD=14.01;ReadPosRankSum=8.860;VQSLOD=1.1247;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,5:17:38.03:464,38,0	0/1:7,0:7:55.90:56,0,71	0/0:23,0:8:20.97:0,21,273	0/0:25,0:8:8.71:0,9,74	0/1:9,0:9:44.35:136,0,44	0/1:18,0:18:25.52:277,0,26	1/1:12,0:12:26.97:250,27,0	0/1:22,0:21:99:136,0,146	0/1:10,0:10:5.76:113,0,6	0/1:6,0:6:32.43:59,0,32	0/1:2,0:2:18.70:21,0,19	0/1:8,0:8:33.52:65,0,34	0/1:11,1:12:27.73:126,0,28	0/1:5,0:5:12.73:85,0,13	0/1:9,2:11:14.75:186,0,15	1/1:13,0:12:0.05:218,0,0	0/1:10,0:9:28.78:105,0,29	0/1:14,0:14:51.62:120,0,52	0/0:16,0:16:36.01:0,36,422	0/0:13,0:13:36.02:0,36,431	0/0:10,0:8:18.04:0,18,223	0/1:7,0:7:57:59,0,57	0/1:8,0:8:6.71:113,0,7	0/1:5,0:5:13.03:13,0,75	1/1:4,4:7:18.01:281,18,0	0/1:17,0:17:54.38:233,0,54	0/1:20,0:20:26.43:292,0,26	0/1:5,0:4:10.91:53,0,11
chr10	13265708	.	TTTA	T	891.52	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=10.074;DP=329;FS=13.719;HRun=0;HaplotypeScore=88.4857;InbreedingCoeff=-0.1661;MQ=61.65;MQ0=12;MQRankSum=-9.313;QD=4.44;ReadPosRankSum=9.955;VQSLOD=-0.4930;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:13,4:16:35.90:377,36,0	0/1:7,0:7:0.79:1,0,74	0/0:23,0:8:14.21:0,14,207	0/0:25,0:8:12.98:0,13,83	0/1:9,0:9:24.20:24,0,48	0/1:17,0:17:39.50:41,0,39	1/1:11,1:12:18.94:78,19,0	0/0:22,0:21:7.72:0,8,180	0/1:10,0:10:9.48:21,0,9	0/1:6,0:6:4.32:4,0,35	0/1:2,0:2:2.37:2,0,19	0/1:8,0:8:9.34:9,0,35	0/1:10,0:10:33.81:36,0,34	0/1:5,0:5:13.50:28,0,14	0/1:11,0:11:21:60,0,21	0/1:13,0:12:12.37:39,0,12	0/1:10,0:9:13.17:13,0,33	0/0:14,0:14:0.57:0,1,66	0/0:14,0:14:35.87:0,36,321	0/0:13,0:13:35.20:0,35,311	0/0:11,0:9:17.98:0,18,162	0/1:7,0:7:1.76:2,0,76	0/1:8,0:8:10.41:20,0,10	0/0:6,0:5:5.67:0,6,81	1/1:8,0:7:18:199,18,0	0/1:17,0:17:28.35:28,0,78	0/1:19,0:19:48.87:67,0,49	0/1:5,0:4:2.35:2,0,18
chr10	13265711	.	ATTTT	A	5679.41	PASS	AB=1.000;AC=46;AF=0.821;AN=56;BaseQRankSum=1.489;DP=310;FS=17.045;HRun=13;HaplotypeScore=73.6971;InbreedingCoeff=0.6421;MQ=61.77;MQ0=13;MQRankSum=-3.838;QD=22.63;ReadPosRankSum=4.788;VQSLOD=1.8413;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:18,0:18:45.10:169,0,45	1/1:4,3:7:9:132,9,0	0/0:23,0:8:18.06:0,18,247	0/1:25,0:8:5.21:5,0,49	1/1:3,6:9:18.05:263,18,0	1/1:2,14:16:39.11:557,39,0	1/1:2,8:10:27.09:376,27,0	1/1:11,10:20:18.96:359,19,0	1/1:1,7:8:15.04:219,15,0	1/1:2,3:5:8.98:132,9,0	1/1:1,1:2:3:44,3,0	1/1:2,4:6:9.01:132,9,0	1/1:3,6:9:15.02:211,15,0	1/1:1,4:5:9:131,9,0	1/1:4,5:10:20.84:275,21,0	1/1:2,10:12:30.07:424,30,0	1/1:4,5:8:15.02:219,15,0	1/1:6,6:12:21.04:294,21,0	0/0:7,0:13:27.05:0,27,354	0/0:4,0:13:30.01:0,30,373	0/0:7,0:8:15.05:0,15,200	1/1:3,3:6:12.01:151,12,0	1/1:1,5:6:15.04:219,15,0	1/1:5,1:5:2.97:44,3,0	1/1:7,0:6:14.67:162,15,0	1/1:5,12:16:36.03:502,36,0	1/1:3,15:18:39.06:537,39,0	1/1:2,3:4:9.02:123,9,0
chr10	13266183	.	TTGTGTGTGTGTGTGTGTGTGTGTGTGTG	T	2749.84	PASS	AB=0.856;AC=35;AF=0.700;AN=50;BaseQRankSum=0.432;DP=464;FS=6.905;HRun=0;HaplotypeScore=252.6522;InbreedingCoeff=0.3914;MQ=64.69;MQ0=40;MQRankSum=-3.474;QD=9.08;ReadPosRankSum=0.016;VQSLOD=1.3890;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:22:21.05:0,21,663	./.	./.	./.	1/1:11,0:9:5.21:22,5,0	1/1:16,0:16:0.47:1,0,0	1/1:33,0:28:2.92:18,3,0	1/1:21,0:22:0.43:1,0,0	1/1:7,11:18:6.02:325,6,0	1/1:13,0:11:15.02:153,15,0	1/1:6,0:5:8.90:60,9,0	0/1:4,4:8:13.90:120,0,14	1/1:7,5:9:3.01:215,3,0	1/1:13,7:16:4.96:337,5,0	1/1:6,9:14:6.02:261,6,0	1/1:10,0:10:5.07:69,5,0	0/1:23,0:22:88.26:222,0,88	1/1:21,0:18:9.83:156,10,0	0/0:24,0:25:15.05:0,15,362	0/0:6,0:9:11.81:0,12,339	0/0:34,0:28:15.03:0,15,494	1/1:8,0:6:2.03:6,2,0	1/1:9,1:10:3.01:122,3,0	1/1:13,19:29:5.20:426,5,0	0/0:8,0:8:12.04:0,12,655	1/1:13,3:15:6:240,6,0	0/1:8,1:8:99:153,0,200	0/0:6,0:5:3.01:0,3,34
chr10	13266420	.	GC	G	7885.07	PASS	AB=0.577;AC=45;AF=0.804;AN=56;BaseQRankSum=-4.916;DP=503;FS=4.339;HRun=10;HaplotypeScore=62.9992;InbreedingCoeff=0.8229;MQ=71.54;MQ0=1;MQRankSum=-3.052;QD=18.51;ReadPosRankSum=5.511;VQSLOD=5.4608;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,0:29:46.85:137,47,0	1/1:1,4:5:12:104,12,0	0/0:16,0:16:3.36:0,3,183	0/0:8,0:8:12.55:0,13,114	0/1:4,11:15:3.19:204,0,3	1/1:3,17:21:50.02:422,50,0	1/1:4,23:28:59.02:501,59,0	1/1:6,15:21:41.79:347,42,0	1/1:3,15:17:35.85:308,36,0	1/1:4,7:11:17.97:156,18,0	1/1:3,8:11:20.99:182,21,0	1/1:2,21:23:62.97:547,63,0	1/1:1,12:13:35.99:312,36,0	1/1:2,22:24:50.60:442,51,0	1/1:1,20:21:56.99:495,57,0	1/1:1,23:24:59.97:517,60,0	1/1:3,25:29:37.81:539,38,0	1/1:0,21:21:59.99:521,60,0	0/0:8,0:14:20.40:0,20,134	0/0:2,0:5:5.52:0,6,25	0/0:12,1:33:11.01:0,11,220	1/1:3,9:12:22.17:196,22,0	1/1:1,7:8:18:156,18,0	1/1:0,28:28:80.98:703,81,0	1/1:1,0:13:18.33:54,18,0	1/1:3,18:21:53.98:469,54,0	1/1:1,14:15:41.99:365,42,0	1/1:2,13:15:23.99:208,24,0
chr10	13267123	.	CTG	C	2258.70	PASS	AB=0.870;AC=25;AF=0.446;AN=56;BaseQRankSum=10.376;DP=686;FS=6.004;HRun=0;HaplotypeScore=216.8541;InbreedingCoeff=-0.7842;MQ=50.35;MQ0=8;MQRankSum=-6.584;QD=3.63;ReadPosRankSum=-3.635;VQSLOD=1.8845;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:18,4:22:1.25:1,0,267	0/1:6,3:9:99:115,0,202	0/0:33,0:17:41.65:0,42,511	0/1:47,0:29:9.79:10,0,511	0/1:26,4:29:28.71:29,0,434	0/1:16,3:17:99:100,0,337	0/1:15,1:14:6.38:6,0,107	0/1:36,17:52:99:345,0,1365	0/1:19,5:24:99:130,0,343	0/1:38,5:43:99:219,0,1245	0/1:17,5:21:32.11:32,0,422	0/1:16,5:20:99:137,0,413	0/1:26,3:29:99:151,0,307	0/1:15,5:20:62.27:62,0,321	0/1:19,5:24:75.40:75,0,148	0/1:14,3:17:99:118,0,394	0/1:10,2:12:77.64:78,0,94	0/1:15,0:15:38.50:38,0,194	0/1:18,1:17:44.34:44,0,564	0/1:21,2:23:99:109,0,445	0/0:18,1:18:4.35:0,4,242	0/1:32,1:32:68.53:69,0,408	0/1:25,2:27:89.22:89,0,568	0/1:16,5:20:27.41:27,0,124	0/0:7,4:11:11.98:0,12,229	0/1:20,5:25:99:179,0,609	0/1:27,5:32:99:129,0,758	0/1:16,4:20:99:117,0,577
chr10	13267125	.	G	GTCTCTCTGTCTC	19260.12	PASS	AB=1.000;AC=53;AF=0.946;AN=56;BaseQRankSum=-0.215;DP=687;FS=0.902;HRun=0;HaplotypeScore=238.7581;InbreedingCoeff=0.4636;MQ=51.60;MQ0=8;MQRankSum=-2.039;QD=29.45;ReadPosRankSum=6.218;VQSLOD=3.7777;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:21:12.04:228,12,0	1/1:9,0:10:18.06:519,18,0	0/0:32,0:17:15.15:0,15,456	0/1:54,0:32:1.09:1,0,478	1/1:29,0:29:21.15:620,21,0	1/1:18,0:17:27.08:678,27,0	1/1:13,0:13:3.01:101,3,0	1/1:48,0:47:69.13:1314,69,0	1/1:16,7:24:15.52:537,16,0	1/1:18,25:44:84.28:3216,84,0	1/1:21,0:21:17.03:597,17,0	1/1:20,0:19:29.46:1043,29,0	1/1:27,0:29:23.72:717,24,0	1/1:11,9:20:11.57:416,12,0	1/1:13,11:24:8.76:266,9,0	1/1:16,0:18:27.09:1037,27,0	1/1:12,0:13:6.02:161,6,0	1/1:7,4:15:0.16:319,0,0	1/1:19,0:17:18.01:331,18,0	1/1:19,0:22:27.09:937,27,0	1/1:13,0:16:1.45:99,1,0	1/1:10,21:32:15.05:520,15,0	1/1:14,10:26:11.60:426,12,0	1/1:20,0:20:11.92:328,12,0	1/1:12,0:12:9.03:201,9,0	1/1:10,15:25:51:1780,51,0	1/1:31,0:33:54.38:1986,54,0	1/1:19,1:20:24.08:882,24,0
chr10	13267147	.	CATT	C	4710.20	PASS	AB=0.805;AC=29;AF=0.518;AN=56;BaseQRankSum=-1.641;DP=564;FS=5.705;HRun=0;HaplotypeScore=242.4123;InbreedingCoeff=-0.6284;MQ=59.76;MQ0=3;MQRankSum=-5.313;QD=10.54;ReadPosRankSum=1.944;VQSLOD=4.1488;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:7,5:17:99:141,0,144	0/1:8,2:10:99:210,0,173	0/0:43,0:26:68.69:0,69,1288	0/0:71,0:44:63.09:0,63,1326	0/1:10,14:24:34.65:255,0,35	0/1:13,3:17:39.47:187,0,39	0/1:8,2:9:47.30:47,0,62	0/1:31,5:35:99:180,0,1610	1/1:12,0:12:4.90:147,5,0	0/1:21,0:20:99:361,0,379	0/1:10,6:18:3.18:229,0,3	0/1:11,7:18:97.50:290,0,97	0/1:10,0:20:99:169,0,114	0/1:13,0:13:5.16:133,0,5	0/1:21,0:20:39.36:39,0,96	0/1:12,6:19:99:286,0,252	0/1:5,4:10:40.46:40,0,151	0/1:8,0:10:45.33:45,0,74	0/1:9,3:12:78.52:79,0,592	0/1:10,12:22:99:375,0,109	0/1:7,3:11:6.74:39,0,7	1/1:15,0:15:8.07:185,8,0	0/1:14,0:14:68.37:113,0,68	1/1:8,4:15:9.26:108,9,0	0/1:9,4:11:99:137,0,142	0/1:17,0:17:99:186,0,313	0/1:13,14:28:99:596,0,299	0/1:12,2:14:99:130,0,410
chr10	13267150	.	T	TTGTCTCTC	7043.61	PASS	AB=0.883;AC=40;AF=0.714;AN=56;BaseQRankSum=-3.025;DP=616;FS=6.595;HRun=0;HaplotypeScore=282.9654;InbreedingCoeff=0.3792;MQ=56.62;MQ0=3;MQRankSum=-0.651;QD=15.69;ReadPosRankSum=2.492;VQSLOD=2.7676;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:5:0,5,16	1/1:7,3:10:9.03:211,9,0	0/0:40,0:23:2.98:0,3,24	0/0:69,0:43:13.86:0,14,266	1/1:28,1:28:0.46:2,0,0	0/1:14,3:15:0.98:57,0,1	1/1:12,0:10:9.03:218,9,0	1/1:45,0:43:50.99:821,51,0	1/1:14,2:16:4.49:25,4,0	1/1:24,1:24:32.38:754,32,0	0/0:22,0:21:1.71:0,2,8	0/1:16,5:20:3.34:212,0,3	1/1:19,1:20:4.84:235,5,0	0/1:15,2:17:0.66:57,0,1	0/1:18,4:21:0.46:1,0,0	1/1:17,7:24:18.02:496,18,0	1/1:11,0:11:2.27:204,2,0	0/1:8,1:9:30.21:246,0,30	1/1:15,0:15:27:611,27,0	1/1:27,0:26:8.60:238,9,0	1/1:13,0:12:1.82:6,2,0	1/1:17,0:16:3.75:11,4,0	1/1:15,2:17:7.80:187,8,0	0/0:16,1:16:2.67:0,3,14	0/1:14,0:12:0:0,0,0	1/1:21,2:22:11.61:921,12,0	1/1:31,0:30:41.66:911,42,0	1/1:8,6:14:24.08:620,24,0
chr10	13267165	.	TCTG	T	112.20	PASS	AB=0.997;AC=15;AF=0.268;AN=56;BaseQRankSum=9.379;DP=642;FS=21.566;HRun=0;HaplotypeScore=256.0924;InbreedingCoeff=-0.0327;MQ=50.48;MQ0=10;MQRankSum=-5.480;QD=0.35;ReadPosRankSum=-10.805;VQSLOD=-0.4899;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:13,5:17:1.29:0,1,78	0/0:9,0:9:8.98:0,9,196	0/0:23,0:10:18.02:0,18,295	0/1:50,1:31:1.33:1,0,700	0/1:31,0:29:19.50:20,0,44	0/1:20,0:19:9.90:10,0,187	0/0:15,0:13:8.37:0,8,166	0/0:52,0:49:99:0,138,3052	0/0:20,0:19:0.68:0,1,33	0/0:31,0:29:82.71:0,83,1542	1/1:20,0:19:4.94:29,5,0	0/1:27,0:25:61.26:61,0,125	0/1:21,0:21:8.87:9,0,156	0/1:18,0:17:12.58:13,0,58	0/1:24,0:23:0.74:1,0,133	0/1:26,0:26:62.21:62,0,275	0/0:9,0:8:13.49:0,13,216	0/0:12,0:12:21.06:0,21,354	0/0:20,0:19:54.18:0,54,1134	0/0:26,0:25:13.89:0,14,226	0/0:15,0:14:2.84:0,3,8	0/1:23,0:21:1.30:16,0,1	0/1:17,0:17:13.45:13,0,124	0/1:23,0:23:5.44:5,0,15	1/1:14,2:14:2.49:11,2,0	0/0:28,0:27:66.20:0,66,1337	0/0:29,0:28:5.81:0,6,759	0/0:16,0:15:29.96:0,30,533
chr10	13267168	.	G	GTCTC	594.14	PASS	AB=0.991;AC=28;AF=0.500;AN=56;BaseQRankSum=5.219;DP=639;FS=5.728;HRun=0;HaplotypeScore=259.1276;InbreedingCoeff=-0.1277;MQ=48.14;MQ0=10;MQRankSum=-4.145;QD=1.34;ReadPosRankSum=0.448;VQSLOD=1.9883;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:13,5:16:9.49:86,9,0	0/1:9,0:9:7.58:9,0,8	0/0:16,0:5:5.65:0,6,47	0/0:48,0:28:18.44:0,18,311	1/1:30,0:28:0.45:1,0,0	0/1:18,0:20:23.21:23,0,58	0/1:16,0:14:6.35:6,0,8	0/0:52,0:49:66.22:0,66,1123	0/0:20,0:19:0.03:0,0,6	0/1:31,0:30:65.03:65,0,437	1/1:20,0:20:2.79:14,3,0	1/1:27,0:25:3.59:26,4,0	1/1:17,0:19:8.34:50,8,0	0/1:19,0:18:7.98:23,0,8	0/1:23,0:22:1.26:1,0,74	0/1:26,0:26:21.60:49,0,22	0/1:9,0:8:8.68:40,0,9	0/1:11,0:11:53.03:53,0,60	0/1:19,0:18:1.46:1,0,370	0/1:26,0:25:12.34:12,0,40	1/1:16,0:15:1.55:5,2,0	0/0:24,0:22:2.70:0,3,13	0/0:17,0:17:1.49:0,1,16	1/1:21,0:23:7.02:35,7,0	0/0:12,6:15:0.26:0,0,1	0/1:31,0:29:93.09:93,0,471	0/1:29,0:28:99:105,0,106	0/1:17,0:15:30.07:42,0,30
chr10	13267170	.	C	CTG	233.33	PASS	AB=0.918;AC=10;AF=0.179;AN=56;BaseQRankSum=1.636;DP=637;FS=14.151;HRun=0;HaplotypeScore=251.5522;InbreedingCoeff=-0.0534;MQ=46.94;MQ0=10;MQRankSum=0.470;QD=1.14;ReadPosRankSum=-1.523;VQSLOD=0.8790;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:18,0:16:8.29:8,0,23	0/0:8,1:9:9.03:0,9,124	0/0:12,0:3:8.86:0,9,104	0/0:45,0:27:19.68:0,20,356	0/0:29,1:28:6.23:0,6,22	0/0:21,0:20:9.80:0,10,113	0/0:15,1:14:11.09:0,11,133	0/0:48,0:45:99:0,120,1592	0/0:19,1:19:3.25:0,3,19	0/1:30,2:30:99:130,0,664	0/0:20,1:21:0.87:0,1,3	0/0:20,6:25:10.45:0,10,105	0/1:17,3:20:68.82:88,0,69	0/1:15,4:18:41.96:42,0,42	0/0:24,0:23:7.04:0,7,85	0/0:20,6:26:16.70:0,17,199	0/1:9,0:8:18.35:18,0,86	0/0:10,1:11:17.21:0,17,171	0/0:19,0:18:51.12:0,51,657	0/0:27,0:26:14.72:0,15,166	0/0:14,2:15:4.42:0,4,18	0/0:23,1:22:2.26:0,2,6	0/0:16,0:16:5.40:0,5,90	0/1:19,5:23:13.89:46,0,14	1/1:20,0:17:2.83:14,3,0	0/1:32,1:30:0.41:0,0,663	0/1:26,2:28:15.06:15,0,375	0/0:17,0:15:27.03:0,27,320
chr10	13267174	.	CTG	C	317.58	PASS	AB=0.973;AC=23;AF=0.411;AN=56;BaseQRankSum=6.087;DP=621;FS=3.320;HRun=0;HaplotypeScore=237.8139;InbreedingCoeff=-0.0795;MQ=43.59;MQ0=12;MQRankSum=-2.659;QD=0.86;ReadPosRankSum=4.007;VQSLOD=2.6058;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:17,1:16:9.55:0,10,42	1/1:11,0:11:7.35:27,7,0	0/0:9,1:2:6:0,6,80	0/0:31,1:17:15.63:0,16,367	1/1:29,1:28:0.37:48,0,0	0/1:21,0:20:8.12:8,0,65	0/1:16,0:14:2.66:11,0,3	0/0:53,0:50:57.40:0,57,1385	0/0:17,2:18:0.36:0,0,1	0/1:27,2:26:65.99:66,0,488	1/1:17,1:18:2.55:25,3,0	0/0:25,2:25:1.94:0,2,19	0/1:21,0:21:26.25:41,0,26	1/1:17,2:18:2.86:39,3,0	0/0:24,1:24:5.97:0,6,77	0/1:24,1:25:22.36:22,0,54	0/1:10,0:9:9.11:16,0,9	0/1:9,2:11:6.56:7,0,68	0/0:19,0:18:21.47:0,21,524	0/1:27,0:26:17.74:18,0,55	0/1:17,0:16:5.48:6,0,5	0/0:18,6:22:2.03:0,2,6	0/1:16,1:17:6.37:6,0,7	0/1:22,1:22:5.63:32,0,6	0/0:20,1:17:0.40:0,0,1	0/1:30,0:27:9.54:10,0,530	0/1:29,0:28:40.44:40,0,112	1/1:17,0:15:1.24:39,1,0
chr10	13267176	.	GTCTGTC	G	1059.65	PASS	AB=0.996;AC=25;AF=0.446;AN=56;BaseQRankSum=4.238;DP=611;FS=4.157;HRun=0;HaplotypeScore=244.9511;InbreedingCoeff=-0.2262;MQ=41.09;MQ0=13;MQRankSum=-3.133;QD=2.25;ReadPosRankSum=3.238;VQSLOD=2.5651;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:17:2.20:23,2,0	0/1:11,0:11:4.31:43,0,4	0/0:10,0:2:2.99:0,3,24	0/0:28,0:15:18.31:0,18,284	1/1:30,1:29:4.75:33,5,0	0/1:23,0:22:31.97:32,0,111	1/1:15,0:13:2.20:48,2,0	0/1:53,0:50:99:241,0,1843	0/0:19,0:18:4.68:0,5,24	0/1:29,0:26:54.31:54,0,997	0/1:19,0:19:1.36:9,0,1	0/1:25,2:25:22.33:51,0,22	0/0:21,0:21:0.57:0,1,130	0/1:18,0:17:0.80:5,0,1	0/0:25,0:24:5.05:0,5,70	0/1:26,0:26:78.66:79,0,152	0/1:10,0:9:1.82:35,0,2	0/1:10,0:10:35.37:69,0,35	0/1:18,0:17:28.06:28,0,535	0/1:27,0:26:20.75:21,0,70	0/0:15,0:14:2.19:0,2,4	0/0:21,0:19:3.11:0,3,10	0/1:17,0:17:9.91:39,0,10	0/1:23,0:22:2.31:2,0,59	0/1:21,0:17:0.07:0,0,0	0/1:30,0:26:99:135,0,1032	0/1:28,0:27:99:134,0,124	1/1:16,1:15:14.51:120,15,0
chr10	13267178	.	CTG	C	3079.87	PASS	AB=0.810;AC=37;AF=0.661;AN=56;BaseQRankSum=8.784;DP=611;FS=7.582;HRun=0;HaplotypeScore=219.6458;InbreedingCoeff=-0.1566;MQ=37.15;MQ0=14;MQRankSum=-2.777;QD=5.30;ReadPosRankSum=-1.064;VQSLOD=1.9974;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:15:6.47:29,6,0	1/1:6,5:11:10.85:141,11,0	0/0:6,0:1:2.99:0,3,24	0/0:24,0:12:18.80:0,19,244	0/1:27,4:29:1.88:2,0,3	0/1:17,5:21:44.81:87,0,45	1/1:8,7:13:3.58:128,4,0	0/1:51,9:56:99:344,0,1402	1/1:13,6:18:9.83:52,10,0	0/1:23,7:27:99:270,0,482	1/1:12,8:20:3.86:16,4,0	1/1:22,6:26:9.51:95,10,0	0/1:13,8:21:33.05:91,0,33	1/1:13,5:17:10.02:80,10,0	0/1:16,8:23:10.69:11,0,52	0/1:22,5:27:30.36:190,0,30	1/1:6,4:9:14.03:131,14,0	0/1:7,4:11:52.98:114,0,53	0/1:15,4:18:99:181,0,418	0/1:18,9:26:38.65:140,0,39	0/1:12,3:14:5.97:6,0,6	1/1:17,5:19:6.82:27,7,0	1/1:12,6:18:8.86:90,9,0	0/1:18,5:22:6.89:7,0,17	0/1:20,0:17:0.07:0,0,0	0/1:22,7:25:99:244,0,487	0/1:15,13:27:55.43:409,0,55	1/1:11,4:13:24.08:353,24,0
chr10	13267182	.	C	CTG	124.76	PASS	AB=0.990;AC=20;AF=0.370;AN=54;BaseQRankSum=6.805;DP=606;FS=0.000;HRun=0;HaplotypeScore=227.9569;InbreedingCoeff=-0.1755;MQ=33.96;MQ0=15;MQRankSum=-0.833;QD=0.35;ReadPosRankSum=-5.220;VQSLOD=0.5301;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:16,0:15:14.93:15,0,20	0/1:10,0:10:7.96:22,0,8	./.	0/0:15,0:7:10.59:0,11,145	0/0:28,2:29:1.14:0,1,3	0/1:24,0:22:34.04:34,0,37	0/1:16,0:14:7.65:8,0,14	0/0:64,0:58:9.86:0,10,1497	0/1:21,0:19:0.91:3,0,1	0/0:31,0:27:35.82:0,36,582	1/1:21,0:21:2.24:9,2,0	0/1:28,1:27:17.57:27,0,18	0/1:21,0:21:11.35:11,0,144	0/1:17,0:16:1.71:11,0,2	0/0:24,0:23:2.31:0,2,45	0/1:26,0:26:18.33:18,0,60	0/1:10,0:9:7.57:16,0,8	0/0:11,0:11:6.79:0,7,114	0/0:18,0:17:40.61:0,41,483	0/1:26,1:26:12.49:12,0,50	1/1:14,0:13:2.84:14,3,0	0/0:22,0:19:0.24:0,0,1	0/1:19,0:18:4.24:21,0,4	0/1:22,0:21:12.95:13,0,52	0/1:20,0:16:0:0,0,0	0/0:30,0:26:5.05:0,5,422	0/1:26,1:26:20.48:20,0,109	0/1:16,0:14:4.34:4,0,42
chr10	13267190	.	G	GTC	1053.95	PASS	AB=0.847;AC=22;AF=0.423;AN=52;BaseQRankSum=3.193;DP=615;FS=28.598;HRun=0;HaplotypeScore=237.9372;InbreedingCoeff=-0.0459;MQ=28.86;MQ0=20;MQRankSum=-1.242;QD=2.53;ReadPosRankSum=-4.819;VQSLOD=0.6797;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:16:0.39:25,0,0	0/0:9,2:11:5.77:0,6,59	./.	./.	1/1:26,6:31:6.51:57,7,0	0/0:25,0:23:1.69:0,2,37	0/0:15,0:15:3.62:0,4,39	0/1:61,4:58:99:103,0,996	1/1:16,4:18:8.75:117,9,0	0/1:28,8:30:99:398,0,476	1/1:23,2:25:4.24:28,4,0	0/1:22,9:29:1.09:78,0,1	0/0:18,4:22:8.67:0,9,148	0/1:11,7:17:15.95:39,0,16	0/0:17,5:21:2.70:0,3,39	0/1:18,9:27:83.88:84,0,117	0/0:10,0:9:0.60:0,1,52	0/1:7,4:11:54.07:81,0,54	0/0:18,0:16:33.08:0,33,370	0/0:26,0:25:5.25:0,5,114	1/1:12,0:13:2.74:12,3,0	1/1:15,9:20:0.38:1,0,0	0/0:17,2:18:2.15:0,2,24	0/0:18,3:21:2.58:0,3,69	0/1:18,0:15:0:0,0,0	0/1:29,2:27:93.54:94,0,401	0/1:25,2:26:57.14:57,0,205	0/1:14,1:13:20.18:20,0,147
chr10	13267200	.	GTC	G	390.88	PASS	AB=0.892;AC=15;AF=0.288;AN=52;BaseQRankSum=1.372;DP=601;FS=0.743;HRun=0;HaplotypeScore=223.7999;InbreedingCoeff=0.1605;MQ=30.11;MQ0=23;MQRankSum=-1.419;QD=1.95;ReadPosRankSum=1.556;VQSLOD=2.6116;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:14,2:14:2.92:0,3,17	1/1:8,1:9:3.44:20,3,0	./.	./.	0/0:31,0:31:10.80:0,11,90	0/0:27,0:25:3.01:0,3,47	1/1:11,2:12:1.74:22,2,0	0/0:56,0:48:86.22:0,86,1350	0/0:20,2:19:8.89:0,9,84	0/0:32,2:27:34.20:0,34,854	0/0:28,1:29:18.44:0,18,182	0/1:29,0:27:1.71:2,0,90	0/0:17,3:20:2.71:0,3,162	0/0:21,0:20:8.90:0,9,85	0/0:24,1:24:6.02:0,6,96	0/0:27,0:27:18.02:0,18,187	1/1:9,1:9:0.34:31,0,0	0/0:13,1:14:4.39:0,4,253	0/1:17,2:16:62.51:129,0,63	0/1:22,3:24:12.11:67,0,12	1/1:14,0:13:0.72:4,1,0	0/0:27,0:24:1.82:0,2,5	0/1:15,1:16:0.07:0,0,0	0/0:21,0:18:7.27:0,7,104	0/1:16,3:15:0:0,0,0	0/0:29,1:25:34.86:0,35,587	0/1:19,7:24:99:139,0,122	0/1:16,2:15:26.06:101,0,26
chr10	13267202	.	C	CATT	114.04	PASS	AB=0.959;AC=12;AF=0.231;AN=52;BaseQRankSum=11.237;DP=603;FS=0.000;HRun=0;HaplotypeScore=227.0421;InbreedingCoeff=0.0316;MQ=30.46;MQ0=25;MQRankSum=-5.345;QD=0.54;ReadPosRankSum=-11.073;VQSLOD=-0.5652;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:14,1:14:4.09:68,4,0	0/0:9,0:9:8.55:0,9,103	./.	./.	0/1:32,0:32:24.46:24,0,109	0/1:28,0:25:1.87:2,0,49	0/0:13,0:12:3.95:0,4,82	0/0:53,0:46:99:0,132,2240	0/0:21,0:18:4.45:0,4,99	0/0:34,0:27:81.23:0,81,1385	0/1:28,0:28:13.21:13,0,254	0/0:29,0:26:8.76:0,9,181	0/0:21,0:21:15.99:0,16,315	0/0:22,0:21:7.88:0,8,140	0/1:27,0:26:6.26:6,0,98	0/0:27,0:27:20.80:0,21,420	0/1:7,2:8:60.65:61,0,74	0/0:14,0:14:27.05:0,27,446	0/0:20,0:17:48.04:0,48,652	0/0:25,0:24:13.86:0,14,178	0/1:14,1:13:24.98:31,0,25	0/0:27,0:24:2.11:0,2,52	0/1:16,0:15:0.67:1,0,15	0/1:20,2:19:27.28:27,0,99	1/1:20,0:16:4.98:12,5,0	0/0:30,0:25:65.51:0,66,1024	0/0:26,0:24:33.58:0,34,481	0/0:18,0:15:23.04:0,23,262
chr10	13267206	.	CTCTCTG	C	862.66	PASS	AB=0.997;AC=26;AF=0.500;AN=52;BaseQRankSum=1.771;DP=590;FS=2.844;HRun=0;HaplotypeScore=214.7340;InbreedingCoeff=-0.2766;MQ=30.74;MQ0=25;MQRankSum=-1.494;QD=1.81;ReadPosRankSum=-4.277;VQSLOD=1.9178;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:13:1.77:0,2,4	1/1:8,0:8:2.54:10,3,0	./.	./.	0/1:30,0:30:21.83:32,0,22	0/0:28,0:25:3.46:0,3,26	0/0:13,0:12:3.35:0,3,16	0/1:50,2:45:99:111,0,1164	1/1:20,0:17:6.31:32,6,0	0/1:33,0:26:93.60:94,0,743	0/1:25,0:25:14.90:55,0,15	0/1:27,0:24:54.65:71,0,55	0/1:21,0:21:12.32:12,0,220	0/1:21,0:20:59.36:61,0,59	0/0:26,0:25:2.95:0,3,25	0/1:27,0:27:38.42:38,0,131	0/0:9,0:8:2.57:0,3,6	0/1:14,0:14:53.02:86,0,53	0/1:20,0:17:48.57:102,0,49	1/1:23,1:23:2.88:25,3,0	1/1:16,0:14:1.72:12,2,0	1/1:27,1:25:8.87:77,9,0	1/1:19,0:18:5.30:28,5,0	0/0:22,0:19:6.49:0,6,134	0/1:20,0:16:0:0,0,0	0/1:29,0:24:53.37:53,0,757	0/1:24,0:22:53.65:54,0,129	0/1:18,0:15:15.22:49,0,15
chr10	13267210	.	CTG	C	584.17	PASS	AB=0.992;AC=20;AF=0.385;AN=52;BaseQRankSum=-0.319;DP=553;FS=8.458;HRun=0;HaplotypeScore=174.3861;InbreedingCoeff=0.0510;MQ=31.01;MQ0=22;MQRankSum=-0.302;QD=1.87;ReadPosRankSum=-3.460;VQSLOD=1.1514;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:11:1.77:0,2,4	1/1:6,1:7:2.91:20,3,0	./.	./.	0/1:26,1:27:6.42:6,0,46	0/0:25,1:23:2.99:0,3,24	0/0:12,1:12:2.59:0,3,14	0/0:43,0:37:15.34:0,15,766	0/0:20,0:18:0.56:0,1,32	0/1:31,0:25:6.06:6,0,502	0/0:22,1:23:1.45:0,1,98	0/1:23,1:21:22.76:23,0,66	0/0:20,0:20:3.61:0,4,124	0/1:19,0:18:27.93:28,0,48	0/0:24,0:23:6:0,6,55	0/1:25,0:25:13.38:13,0,108	0/1:10,0:9:0.69:12,0,1	0/0:14,0:14:11.25:0,11,178	1/1:18,1:16:12.98:254,13,0	1/1:18,6:23:11.44:102,11,0	1/1:14,2:14:1.87:16,2,0	1/1:27,1:25:14.68:102,15,0	0/0:19,0:18:5.45:0,5,25	0/0:24,0:21:5.88:0,6,79	0/1:17,0:13:0:0,0,0	0/1:28,0:23:17.25:17,0,415	0/1:22,0:20:42.73:95,0,43	0/1:15,0:13:10.59:35,0,11
chr10	13267212	.	G	GTC	2097.57	PASS	AB=1.000;AC=46;AF=0.885;AN=52;BaseQRankSum=-0.618;DP=561;FS=2.489;HRun=0;HaplotypeScore=172.4346;InbreedingCoeff=0.3061;MQ=31.13;MQ0=22;MQRankSum=-2.426;QD=3.75;ReadPosRankSum=-2.290;VQSLOD=2.2256;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:15,0:12:0:0,0,0	1/1:8,0:8:0.89:2,1,0	./.	./.	1/1:17,11:28:0.78:87,1,0	0/1:26,0:23:0:0,0,0	0/1:12,0:11:0:0,0,0	1/1:45,0:39:27.44:165,27,0	1/1:18,2:18:8.98:113,9,0	1/1:30,2:26:36.28:293,36,0	1/1:20,3:23:17.93:248,18,0	1/1:24,1:22:3.78:77,4,0	1/1:19,2:21:17.87:154,18,0	1/1:18,1:18:6.39:129,6,0	1/1:22,2:23:3.01:48,3,0	1/1:21,3:24:6.40:190,6,0	1/1:10,0:9:0.47:2,0,0	1/1:9,4:13:7.56:201,8,0	0/1:18,0:15:0.87:1,0,33	0/1:23,0:22:0.40:2,0,0	1/1:17,0:15:0.47:2,0,0	1/1:25,3:25:1.76:82,2,0	1/1:19,0:18:5.36:22,5,0	1/1:25,0:23:5.93:40,6,0	0/1:17,0:13:0:0,0,0	1/1:28,1:24:9.52:161,10,0	1/1:20,3:21:14.58:138,15,0	1/1:15,0:13:5:26,5,0
chr10	13267397	.	CA	C	7723.28	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=2.791;DP=573;FS=6.948;HRun=9;HaplotypeScore=73.8433;InbreedingCoeff=0.8961;MQ=66.64;MQ0=8;MQRankSum=-3.971;QD=17.09;ReadPosRankSum=3.035;VQSLOD=4.9728;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:32,0:32:3.30:10,3,0	1/1:2,5:7:12.01:110,12,0	0/0:36,0:14:6.60:0,7,139	0/0:38,0:20:13.60:0,14,125	1/1:4,23:27:58.97:569,59,0	1/1:0,17:17:39.02:357,39,0	1/1:1,13:14:27.01:247,27,0	1/1:8,13:21:38.87:352,39,0	1/1:2,13:15:36.02:329,36,0	1/1:6,14:20:42.01:384,42,0	1/1:3,18:21:48.02:439,48,0	1/1:3,21:23:40.46:381,40,0	1/1:3,12:15:33.02:302,33,0	1/1:1,18:19:39.01:357,39,0	1/1:3,20:23:39.02:357,39,0	1/1:5,16:21:30.01:274,30,0	1/1:5,22:27:22.74:460,23,0	1/1:1,14:16:41.06:363,41,0	0/0:16,0:16:48.14:0,48,554	0/0:23,0:24:66.03:0,66,740	0/0:6,0:6:15.04:0,15,173	1/1:4,17:21:39.02:356,39,0	1/1:1,34:35:87.04:796,87,0	1/1:2,10:12:18:165,18,0	1/1:13,0:13:6.13:18,6,0	1/1:3,18:21:48.01:438,48,0	1/1:3,22:25:60.03:549,60,0	1/1:0,6:6:12.01:110,12,0
chr10	13267405	.	AAGAAAAAGAAAAG	A	1764.47	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=4.362;DP=602;FS=9.587;HRun=0;HaplotypeScore=206.2480;InbreedingCoeff=0.9796;MQ=68.18;MQ0=10;MQRankSum=-3.322;QD=40.10;ReadPosRankSum=-2.015;VQSLOD=1.6190;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,31:31:27.09:987,27,0	0/0:6,0:6:15.05:0,15,677	0/0:52,0:20:35.11:0,35,502	0/0:57,0:23:30.87:0,31,414	0/0:30,0:30:49.13:0,49,2906	0/0:22,0:22:53.84:0,54,2124	0/0:14,0:14:29.69:0,30,1219	0/0:18,0:18:32.08:0,32,1272	0/0:13,0:13:36.12:0,36,1677	0/0:19,0:19:52.99:0,53,2136	0/0:23,0:23:62.55:0,63,2525	0/0:22,0:21:42.51:0,43,1586	0/0:13,0:13:35.15:0,35,1140	0/0:19,0:19:45.15:0,45,2134	0/0:21,0:21:42.14:0,42,2096	0/0:18,0:18:35.60:0,36,1500	0/0:25,0:24:63.22:0,63,2869	0/0:17,0:17:47.50:0,47,1855	0/0:18,0:18:54.15:0,54,2498	0/0:26,0:26:78.24:0,78,4094	0/0:6,0:6:18.06:0,18,690	0/0:19,0:19:23.92:0,24,1600	0/0:35,0:35:95.93:0,96,4475	0/0:10,0:10:18.06:0,18,804	1/1:3,10:13:24.08:898,24,0	0/0:21,0:21:60.18:0,60,2432	0/0:23,0:23:62.55:0,63,2642	0/0:11,0:11:27.09:0,27,1463
chr10	13271103	.	C	CTG	1850.35	PASS	AB=1.000;AC=42;AF=0.875;AN=48;BaseQRankSum=-0.692;DP=578;FS=0.000;HRun=0;HaplotypeScore=131.0148;InbreedingCoeff=0.2627;MQ=42.59;MQ0=19;MQRankSum=-1.143;QD=3.82;ReadPosRankSum=0.255;VQSLOD=2.0206;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	1/1:6,0:6:3:25,3,0	./.	./.	1/1:14,0:13:12.80:81,13,0	./.	0/1:23,0:24:0:0,0,0	1/1:25,0:22:2.50:9,2,0	1/1:17,0:17:4.24:27,4,0	1/1:32,0:30:18.56:111,19,0	1/1:13,0:12:5.98:48,6,0	1/1:30,0:30:18.23:141,18,0	1/1:20,0:18:11.71:82,12,0	1/1:28,0:30:14.23:108,14,0	1/1:23,0:23:8.97:70,9,0	1/1:13,1:14:6.01:70,6,0	1/1:27,0:26:17.13:166,17,0	1/1:22,2:24:24.39:224,24,0	1/1:12,0:12:5.85:36,6,0	0/0:14,0:13:2.99:0,3,24	0/1:45,0:42:42.12:226,0,42	1/1:15,0:14:2.99:24,3,0	1/1:20,0:19:8.95:83,9,0	1/1:21,11:34:4.26:48,4,0	0/0:21,0:20:1.72:0,2,3	1/1:27,0:26:20.71:155,21,0	1/1:21,0:20:20.86:191,21,0	1/1:0,0:6:3:26,3,0
chr10	13272050	.	TG	T	744.11	PASS	AB=0.972;AC=6;AF=0.107;AN=56;BaseQRankSum=-3.112;DP=537;FS=18.668;HRun=11;HaplotypeScore=72.0468;InbreedingCoeff=0.4169;MQ=68.31;MQ0=0;MQRankSum=-1.288;QD=8.65;ReadPosRankSum=6.381;VQSLOD=0.5266;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:15,25:40:55.96:460,56,0	0/0:9,0:13:5.72:0,6,29	0/0:11,0:10:14.73:0,15,113	0/0:18,0:17:21.71:0,22,170	0/0:13,0:17:8.77:0,9,54	0/0:18,0:20:14.82:0,15,113	0/0:15,0:27:15.05:0,15,118	0/0:16,0:20:11.62:0,12,69	0/0:13,0:22:2.98:0,3,26	0/0:16,0:16:5.91:0,6,39	0/0:10,0:13:2.88:0,3,15	0/0:17,0:17:23.09:0,23,151	0/0:12,0:19:8.86:0,9,58	0/0:16,0:21:9.27:0,9,59	0/0:21,0:21:19.88:0,20,138	0/0:12,0:22:2.84:0,3,14	0/0:19,0:27:8.93:0,9,71	0/0:10,0:20:6.30:0,6,37	0/1:14,1:17:4.26:4,0,102	0/0:16,0:20:8.84:0,9,78	0/0:10,0:14:6.32:0,6,47	0/0:12,0:17:5.85:0,6,46	0/1:5,0:8:0:0,0,0	0/0:16,0:33:20.49:0,20,143	1/1:4,16:21:49.96:400,50,0	0/0:13,0:16:5.68:0,6,28	0/0:12,0:18:6.65:0,7,33	0/0:4,0:7:2.77:0,3,14
chr10	13272870	.	G	GT	955.15	PASS	AB=0.909;AC=5;AF=0.089;AN=56;BaseQRankSum=-5.239;DP=633;FS=6.045;HRun=9;HaplotypeScore=62.1755;InbreedingCoeff=0.7015;MQ=76.87;MQ0=1;MQRankSum=-1.537;QD=14.47;ReadPosRankSum=0.796;VQSLOD=3.5984;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,25:31:72.03:777,72,0	0/0:14,0:14:41.79:0,42,351	0/0:27,1:24:27.74:0,28,276	0/0:17,0:13:5.20:0,5,33	0/0:31,0:31:77.90:0,78,664	0/0:14,0:14:41.99:0,42,365	0/0:17,0:17:32.97:0,33,286	0/0:29,0:30:70.04:0,70,581	0/0:21,0:21:56.99:0,57,495	0/0:20,0:20:38.98:0,39,339	0/0:29,0:28:80.98:0,81,701	0/0:13,0:13:35.99:0,36,313	0/0:22,2:24:20.79:0,21,409	0/0:13,0:14:32.02:0,32,266	0/0:31,0:31:74.56:0,75,635	0/0:17,0:17:47.96:0,48,412	0/0:18,0:18:44.99:0,45,391	0/0:29,0:29:71.95:0,72,625	0/0:20,0:20:47.97:0,48,411	0/0:38,0:38:86.91:0,87,747	0/0:25,0:25:65.97:0,66,573	0/0:21,1:22:32.78:0,33,507	0/0:16,0:16:35.98:0,36,312	0/1:18,2:20:12.92:13,0,337	1/1:2,11:15:6.89:285,7,0	0/0:25,0:25:59.97:0,60,521	0/0:34,1:34:59.78:0,60,744	0/0:19,0:19:50.99:0,51,443
chr10	13275200	.	C	CTA	1284.62	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-5.452;DP=307;FS=5.619;HRun=0;HaplotypeScore=61.8677;InbreedingCoeff=0.9204;MQ=99.54;MQ0=0;MQRankSum=-3.322;QD=49.41;ReadPosRankSum=1.692;VQSLOD=4.7765;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,16:18:34.05:978,34,0	0/0:3,0:3:9.03:0,9,144	0/0:23,0:21:60.05:0,60,919	0/0:24,0:22:58.77:0,59,869	0/0:12,0:12:36.12:0,36,586	0/0:7,0:7:21.06:0,21,319	0/0:7,0:7:21.07:0,21,342	0/0:19,0:19:54.18:0,54,860	0/0:5,0:5:15.05:0,15,242	0/0:11,0:11:33.11:0,33,538	0/0:7,0:7:21.07:0,21,341	0/0:5,0:5:15.05:0,15,241	0/0:10,0:10:30.10:0,30,487	0/0:10,0:10:30.10:0,30,488	0/0:12,0:12:36.12:0,36,583	0/0:5,0:5:15.05:0,15,245	0/0:17,0:17:51.17:0,51,831	0/0:7,0:7:21.07:0,21,342	0/0:7,0:7:21.07:0,21,342	0/0:16,0:16:48.16:0,48,783	0/0:12,0:11:30.10:0,30,488	0/0:5,0:5:15.05:0,15,245	0/0:10,0:10:26.96:0,27,406	0/0:14,0:14:39.13:0,39,633	1/1:0,8:8:21.07:427,21,0	0/0:11,0:11:33.11:0,33,538	0/0:17,0:17:51.15:0,51,786	0/0:5,0:5:15.05:0,15,244
chr10	13275414	.	GC	G	567.53	PASS	AB=0.915;AC=9;AF=0.161;AN=56;BaseQRankSum=-1.959;DP=357;FS=7.158;HRun=9;HaplotypeScore=56.9699;InbreedingCoeff=0.5167;MQ=86.64;MQ0=1;MQRankSum=0.331;QD=9.79;ReadPosRankSum=-0.158;VQSLOD=1.6346;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,2:31:32.33:0,32,880	0/0:2,0:2:5.99:0,6,56	0/0:25,0:20:35.23:0,35,346	0/1:12,0:11:1.31:1,0,15	0/0:15,0:15:36.58:0,37,416	0/0:10,0:10:30.09:0,30,346	0/0:17,1:18:20.65:0,21,472	0/1:7,1:8:12.44:12,0,113	0/0:8,0:8:15.04:0,15,173	0/0:16,0:16:39.11:0,39,442	0/1:5,1:6:15.24:15,0,92	0/0:3,0:3:3.89:0,4,36	0/0:12,0:12:21.05:0,21,233	0/0:9,1:10:24.07:0,24,277	0/0:14,0:14:39.09:0,39,432	0/0:6,0:6:18.05:0,18,208	0/0:29,1:30:53.78:0,54,873	0/0:12,0:12:33.10:0,33,381	1/1:0,4:4:12.01:110,12,0	1/1:1,9:10:27.01:247,27,0	1/1:2,16:18:36.02:329,36,0	0/0:11,0:11:21.06:0,21,242	0/0:6,0:6:15.04:0,15,173	0/0:27,0:27:66.20:0,66,761	0/0:1,0:6:2.84:0,3,14	0/0:18,1:19:20.81:0,21,484	0/0:14,1:16:8.46:0,8,319	0/0:1,0:1:3.01:0,3,35
chr10	13275458	.	C	CA	12818.67	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=-13.291;DP=527;FS=15.753;HRun=4;HaplotypeScore=57.6282;InbreedingCoeff=0.9746;MQ=67.97;MQ0=1;MQRankSum=-0.103;QD=35.41;ReadPosRankSum=1.711;VQSLOD=3.5924;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,126,1425	1/1:0,7:7:21.07:284,21,0	0/0:22,0:15:12.51:0,13,188	0/0:20,0:17:13.77:0,14,320	1/1:2,20:22:57.19:777,57,0	1/1:0,9:9:27.09:369,27,0	1/1:2,21:23:59:767,59,0	1/1:4,24:27:72.23:967,72,0	1/1:0,15:15:42.14:574,42,0	1/1:2,22:24:66.22:903,66,0	1/1:1,6:7:18.06:246,18,0	1/1:1,6:7:10.72:162,11,0	1/1:1,8:9:27.08:358,27,0	1/1:0,18:18:48.16:656,48,0	1/1:1,13:14:36.12:492,36,0	1/1:0,14:14:33.11:451,33,0	1/1:3,34:37:90.30:1222,90,0	1/1:1,20:21:51.17:698,51,0	0/0:24,0:24:60.16:0,60,672	0/0:16,0:16:48.07:0,48,528	0/0:30,0:30:87.25:0,87,986	1/1:1,9:10:30.10:402,30,0	1/1:1,12:13:33.11:451,33,0	1/1:3,36:39:99:1408,105,0	0/0:8,0:8:21.06:0,21,238	1/1:1,18:19:51.17:694,51,0	1/1:1,21:21:57.19:772,57,0	1/1:0,4:4:12.04:164,12,0
chr10	13275964	.	C	CA	22062.55	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=2.708;DP=781;FS=9.055;HRun=1;HaplotypeScore=163.2466;InbreedingCoeff=0.9998;MQ=76.81;MQ0=0;MQRankSum=-2.433;QD=40.56;ReadPosRankSum=3.201;VQSLOD=3.1852;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,132,1685	1/1:0,11:11:33.11:494,33,0	0/0:21,0:19:47.64:0,48,562	0/0:28,0:27:75.15:0,75,915	1/1:1,21:22:63.21:927,63,0	1/1:0,25:25:72.24:1079,72,0	1/1:2,41:43:99:1483,99,0	1/1:4,23:27:72.20:988,72,0	1/1:1,25:26:75.25:1115,75,0	1/1:5,31:37:99:1433,102,0	1/1:0,15:15:39.06:557,39,0	1/1:1,27:29:81.27:1206,81,0	1/1:1,17:18:48.16:719,48,0	1/1:0,31:31:87.29:1303,87,0	1/1:2,24:26:66.22:989,66,0	1/1:0,18:18:51.17:764,51,0	1/1:0,31:30:90.30:1346,90,0	1/1:0,20:20:60.20:899,60,0	0/0:19,0:19:54.15:0,54,673	0/0:11,0:11:30.10:0,30,389	0/0:97,0:97:99:0,283,3572	1/1:2,21:23:53.87:783,54,0	1/1:0,13:13:35.89:538,36,0	1/1:0,51:51:99:2157,144,0	0/0:17,0:17:42.14:0,42,540	1/1:0,42:42:99:1802,123,0	1/1:0,19:19:57.19:853,57,0	1/1:0,17:17:42.14:628,42,0
chr10	13276312	.	C	CTTTTT	7086.98	PASS	AB=0.603;AC=50;AF=0.893;AN=56;BaseQRankSum=-0.983;DP=540;FS=0.000;HRun=14;HaplotypeScore=123.7322;InbreedingCoeff=0.2663;MQ=54.21;MQ0=12;MQRankSum=-0.759;QD=13.60;ReadPosRankSum=-0.942;VQSLOD=1.7623;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:26:52.70:573,53,0	1/1:1,6:11:24.02:394,24,0	0/0:11,0:9:4.34:0,4,19	0/0:8,0:5:5.35:0,5,38	1/1:9,11:22:19.61:284,20,0	1/1:7,1:25:22.57:336,23,0	1/1:11,1:18:7.27:132,7,0	1/1:19,1:21:28.08:357,28,0	1/1:22,0:21:41.30:454,41,0	0/1:10,9:25:45.55:373,0,46	1/1:17,3:19:4.32:339,4,0	1/1:5,0:16:3.48:32,3,0	1/1:16,0:16:5.98:94,6,0	1/1:20,0:20:35.94:404,36,0	1/1:3,11:21:3.01:74,3,0	1/1:4,9:20:8.86:138,9,0	0/1:8,2:24:16.33:254,0,16	1/1:6,13:21:9.87:101,10,0	1/1:32,0:28:50.36:508,50,0	1/1:19,0:18:36.57:373,37,0	1/1:7,0:7:3:27,3,0	1/1:8,1:10:22.11:210,22,0	1/1:13,2:15:27.04:400,27,0	1/1:5,7:17:3.48:41,3,0	1/1:20,0:19:38.11:489,38,0	1/1:27,0:26:52.70:521,53,0	1/1:7,0:24:9.09:149,9,0	1/1:1,0:7:3.01:33,3,0
chr10	13276320	.	T	TTTTTT	6218.04	PASS	AB=1.000;AC=50;AF=0.893;AN=56;BaseQRankSum=-3.370;DP=508;FS=0.000;HRun=7;HaplotypeScore=84.5086;InbreedingCoeff=0.2903;MQ=47.24;MQ0=23;MQRankSum=-0.187;QD=12.59;ReadPosRankSum=-0.761;VQSLOD=-0.0230;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:24:52.38:404,52,0	1/1:10,0:10:24.02:394,24,0	0/0:8,0:6:4.46:0,4,20	0/0:6,0:3:5.38:0,5,38	1/1:22,0:22:19.61:283,20,0	1/1:23,0:22:19.61:317,20,0	1/1:22,0:19:7.27:132,7,0	1/1:18,0:18:28.08:357,28,0	1/1:20,0:19:41.24:435,41,0	0/1:23,0:22:48.52:355,0,49	1/1:16,0:15:1.27:283,1,0	1/1:15,0:15:4.36:34,4,0	1/1:4,8:13:5.98:94,6,0	1/1:18,0:17:35.89:385,36,0	1/1:21,0:21:3.01:74,3,0	1/1:20,0:20:8.86:138,9,0	0/1:25,0:21:13.38:270,0,13	1/1:25,0:21:6.86:57,7,0	1/1:25,0:21:46.47:408,46,0	1/1:19,0:18:33.55:264,34,0	1/1:3,0:3:2.69:37,3,0	1/1:10,0:10:22.02:172,22,0	1/1:16,0:14:27.04:400,27,0	1/1:20,0:17:0.47:1,0,0	1/1:18,0:17:37.96:337,38,0	1/1:28,0:27:49.45:404,49,0	1/1:27,0:26:8.81:148,9,0	1/1:10,0:7:3.01:33,3,0
chr10	13276530	.	ATT	A	1281.85	PASS	AB=0.846;AC=7;AF=0.125;AN=56;BaseQRankSum=6.926;DP=521;FS=10.437;HRun=11;HaplotypeScore=69.9528;InbreedingCoeff=0.8224;MQ=68.47;MQ0=0;MQRankSum=0.950;QD=17.32;ReadPosRankSum=1.563;VQSLOD=1.5899;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:28:74.21:0,74,1058	0/0:8,0:8:15.03:0,15,208	0/0:8,0:8:11.25:0,11,137	0/1:9,0:11:21.41:21,0,78	0/0:27,0:27:75.18:0,75,1049	0/0:22,0:22:60.19:0,60,902	0/0:28,0:28:81.27:0,81,1223	0/0:31,0:31:72.23:0,72,1087	0/0:19,0:19:53.92:0,54,784	0/0:17,0:17:36.12:0,36,554	0/0:10,0:11:29.59:0,30,424	0/0:14,0:14:36.10:0,36,513	0/0:12,0:13:29.57:0,30,402	0/0:11,0:12:26.58:0,27,378	0/0:19,0:21:56.16:0,56,793	0/0:16,0:17:41.63:0,42,599	0/0:23,0:24:68.71:0,69,1004	0/0:18,0:18:51.16:0,51,760	1/1:2,11:14:35.81:356,36,0	1/1:2,16:18:32.98:350,33,0	1/1:5,26:31:66.13:702,66,0	0/0:13,0:13:30.10:0,30,461	0/0:14,0:15:41.63:0,42,606	0/0:20,0:23:56.16:0,56,794	0/0:13,0:14:41.61:0,42,576	0/0:27,0:29:71.72:0,72,1034	0/0:25,0:24:66.22:0,66,1003	0/0:10,0:10:30.10:0,30,457
chr10	13276942	.	AATTGAGAATCCCTCT	A	3559.65	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.637;DP=607;FS=6.102;HRun=0;HaplotypeScore=263.2146;InbreedingCoeff=0.9990;MQ=79.85;MQ0=0;MQRankSum=-8.256;QD=118.66;ReadPosRankSum=0.475;VQSLOD=2.4291;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,19:19:48.16:2088,48,0	0/0:9,0:9:27.09:0,27,2064	0/0:28,0:28:69.28:0,69,3973	0/0:14,0:14:39.13:0,39,2004	0/0:35,0:35:99:0,105,7280	0/0:17,0:17:51.18:0,51,3908	0/0:22,0:22:66.22:0,66,4129	0/0:26,0:26:78.26:0,78,5014	0/0:21,0:21:63.22:0,63,4652	0/0:28,0:28:84.28:0,84,5665	0/0:17,0:17:51.17:0,51,3427	0/0:30,0:30:90.31:0,90,6490	0/0:17,0:17:51.18:0,51,3891	0/0:30,0:30:90.31:0,90,6472	0/0:23,0:23:69.24:0,69,5201	0/0:14,0:14:42.14:0,42,2879	0/0:37,0:37:99:0,105,6813	0/0:22,0:22:66.21:0,66,4578	0/0:23,0:23:69.24:0,69,4404	0/0:21,0:21:63.20:0,63,3888	0/0:22,0:22:66.23:0,66,4851	0/0:21,0:21:60.21:0,60,4186	0/0:10,0:10:30.10:0,30,2144	0/0:30,0:30:90.31:0,90,6545	1/1:0,11:11:33.11:1471,33,0	0/0:26,0:26:78.27:0,78,5452	0/0:21,0:21:63.22:0,63,4709	0/0:13,0:13:39.13:0,39,2765
chr10	13277583	.	TGATAGATAGATA	T	521.39	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=4.916;DP=786;FS=1.679;HRun=0;HaplotypeScore=300.4109;InbreedingCoeff=0.9474;MQ=57.77;MQ0=17;MQRankSum=-3.757;QD=11.09;ReadPosRankSum=-4.800;VQSLOD=1.5248;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:17,8:25:32.98:557,33,0	0/0:9,0:9:21.07:0,21,1213	0/0:22,0:19:20.85:0,21,1073	0/0:23,0:15:20.99:0,21,769	0/0:30,0:30:54.18:0,54,2798	0/0:26,0:26:53.14:0,53,2830	0/0:19,0:16:33.11:0,33,1733	0/0:38,0:32:57.20:0,57,2688	0/0:29,0:29:24.26:0,24,2510	0/0:41,0:37:90.31:0,90,4877	0/0:25,0:26:51.04:0,51,2749	0/0:33,0:34:51.17:0,51,2423	0/0:28,0:27:50.84:0,51,2434	0/0:25,0:26:51.24:0,51,2467	0/0:44,0:44:94.19:0,94,4900	0/0:27,0:24:45.24:0,45,3410	0/0:28,0:30:54.85:0,55,2484	0/0:22,0:23:48.16:0,48,2352	0/0:11,0:18:42.10:0,42,1199	0/0:11,0:19:9.03:0,9,340	0/0:17,0:23:30:0,30,898	0/0:30,0:29:56.96:0,57,3134	0/0:23,0:23:48.16:0,48,2322	0/0:28,0:31:27.10:0,27,2460	1/1:7,15:21:12.24:81,12,0	0/0:38,0:35:91.79:0,92,4679	0/0:33,0:32:69.24:0,69,3284	0/0:27,0:27:63.22:0,63,3363
chr10	13277637	.	TAGAC	T	10914.70	PASS	AB=0.690;AC=38;AF=0.679;AN=56;BaseQRankSum=-1.054;DP=804;FS=0.525;HRun=0;HaplotypeScore=225.5770;InbreedingCoeff=0.5701;MQ=46.66;MQ0=33;MQRankSum=4.363;QD=17.27;ReadPosRankSum=1.581;VQSLOD=4.5681;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:19:1.74:0,2,144	1/1:3,8:11:27.06:406,27,0	0/0:35,0:13:25.86:0,26,424	0/0:18,0:11:14.84:0,15,145	1/1:16,15:30:32.73:459,33,0	1/1:12,17:26:44.72:678,45,0	1/1:17,7:16:11.43:176,11,0	1/1:38,2:20:26.88:265,27,0	1/1:17,16:31:49.32:740,49,0	1/1:36,9:37:71.83:891,72,0	1/1:11,10:20:27.06:381,27,0	0/1:9,24:30:28.23:268,0,28	1/1:15,11:22:7.56:223,8,0	0/1:20,9:28:19.13:195,0,19	1/1:25,11:34:34.68:540,35,0	0/1:16,18:31:8.48:700,0,8	1/1:19,6:24:22.61:490,23,0	1/1:8,9:17:41.06:560,41,0	0/0:20,0:18:42.08:0,42,834	0/0:36,0:29:36.11:0,36,842	0/0:17,0:17:11.85:0,12,299	1/1:20,21:40:53.56:808,54,0	1/1:12,23:34:56.87:879,57,0	1/1:15,13:27:2.99:349,3,0	0/0:21,0:20:12.18:0,12,183	0/1:34,15:40:8.31:971,0,8	1/1:18,5:22:1.31:357,1,0	1/1:12,10:22:36.10:578,36,0
chr10	13277678	.	T	TGATA	9146.84	PASS	AB=0.801;AC=45;AF=0.804;AN=56;BaseQRankSum=-5.454;DP=721;FS=11.711;HRun=0;HaplotypeScore=235.6508;InbreedingCoeff=0.1373;MQ=44.89;MQ0=18;MQRankSum=2.477;QD=13.29;ReadPosRankSum=1.857;VQSLOD=3.1341;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:15:0.39:1,0,0	1/1:10,9:19:21.42:411,21,0	0/1:22,0:10:3.98:6,0,4	0/0:13,0:11:2.84:0,3,34	1/1:19,10:30:18.03:369,18,0	1/1:16,0:24:3.88:23,4,0	0/1:11,0:11:0:0,0,0	1/1:39,1:31:21.06:326,21,0	0/1:27,7:34:5.62:307,0,6	1/1:22,15:42:2.80:1321,3,0	1/1:23,3:26:5.83:146,6,0	1/1:13,4:17:5.78:145,6,0	1/1:16,16:32:34.69:772,35,0	0/1:17,9:25:27.88:415,0,28	1/1:12,12:24:14.72:364,15,0	1/1:18,9:30:14.72:683,15,0	0/1:12,10:24:0.91:489,0,1	0/1:10,7:21:29.32:487,0,29	1/1:12,0:10:8.99:105,9,0	1/1:27,0:25:0.47:1,0,0	0/0:14,0:19:0:0,0,0	1/1:21,8:37:11.92:230,12,0	1/1:30,13:43:10.48:533,10,0	1/1:12,8:20:5.23:80,5,0	1/1:15,0:25:8.32:77,8,0	1/1:15,12:28:34.94:954,35,0	1/1:8,9:20:38.34:834,38,0	0/1:6,1:7:42.77:66,0,43
chr10	13277725	.	A	AGGT	112.96	PASS	AB=1.000;AC=5;AF=0.096;AN=52;BaseQRankSum=3.574;DP=884;FS=0.000;HRun=0;HaplotypeScore=335.7021;InbreedingCoeff=0.5967;MQ=37.18;MQ0=62;MQRankSum=-3.415;QD=2.76;ReadPosRankSum=-3.425;VQSLOD=0.7628;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:7,0:6:0.10:0,0,0	0/0:20,0:20:41.99:0,42,615	./.	./.	0/0:42,0:37:47.35:0,47,817	0/0:43,0:36:88.25:0,88,1343	0/0:26,0:14:19.26:0,19,334	0/0:48,0:22:45.15:0,45,771	0/0:37,0:33:75.37:0,75,932	0/0:81,0:74:99:0,199,3410	0/0:40,0:34:32.32:0,32,517	0/0:22,0:21:36.78:0,37,659	0/0:48,0:42:79.45:0,79,1291	0/0:32,0:30:52.82:0,53,808	0/0:38,0:37:51.55:0,52,736	0/0:33,0:28:70.43:0,70,1106	0/0:25,0:25:48.96:0,49,820	0/0:19,0:19:45.15:0,45,803	1/1:6,2:3:5.03:140,5,0	0/0:18,14:28:2.51:0,3,53	0/0:9,0:8:2.87:0,3,47	0/0:37,0:35:42.45:0,42,712	0/0:42,0:40:65.24:0,65,1163	0/0:19,0:16:12.57:0,13,182	1/1:26,0:21:0.24:65,0,0	0/0:53,0:43:99:0,120,2097	0/0:43,0:38:80.49:0,80,1336	0/0:13,0:13:36.06:0,36,600
chr10	13277732	.	TAGAC	T	69.71	PASS	AB=0.798;AC=3;AF=0.058;AN=52;BaseQRankSum=3.823;DP=907;FS=4.735;HRun=0;HaplotypeScore=341.3729;InbreedingCoeff=0.2818;MQ=36.52;MQ0=68;MQRankSum=-3.127;QD=1.79;ReadPosRankSum=-3.033;VQSLOD=1.1585;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:5,2:6:0.02:0,0,0	0/0:20,0:20:47.42:0,47,792	./.	./.	0/0:44,0:39:53.88:0,54,1295	0/0:45,0:37:99:0,101,2057	0/0:27,0:14:25.28:0,25,534	0/0:55,0:23:48.01:0,48,958	0/0:38,0:33:75.90:0,76,1225	0/0:81,0:74:99:0,208,4877	0/0:44,0:38:38.34:0,38,852	0/0:24,0:23:48.03:0,48,1038	0/0:45,0:40:76.95:0,77,1840	0/0:33,0:31:55.59:0,56,1119	0/0:38,0:35:61.52:0,62,1077	0/0:34,0:28:78.04:0,78,1524	0/0:24,0:23:55.20:0,55,1145	0/0:20,0:19:45.15:0,45,1223	0/1:8,0:3:10.55:11,0,39	0/0:32,0:29:7.37:0,7,98	0/0:7,0:5:3.01:0,3,48	0/0:40,0:37:41.86:0,42,1135	0/0:42,0:39:58.07:0,58,1575	0/0:20,0:16:12.81:0,13,303	0/1:9,14:18:3.89:142,0,4	0/0:54,0:44:99:0,126,3294	0/0:44,0:39:84.60:0,85,1815	0/0:14,0:14:36.07:0,36,920
chr10	13277752	.	TGATA	T	6516.85	PASS	AB=0.783;AC=22;AF=0.423;AN=52;BaseQRankSum=-2.354;DP=855;FS=4.078;HRun=0;HaplotypeScore=289.8878;InbreedingCoeff=-0.5956;MQ=35.33;MQ0=60;MQRankSum=-3.665;QD=9.13;ReadPosRankSum=1.657;VQSLOD=3.7955;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/1:12,5:17:99:201,0,462	./.	0/0:21,0:3:6.02:0,6,151	0/0:38,4:36:26.17:0,26,1080	0/1:30,16:39:99:693,0,954	0/1:22,1:12:99:135,0,174	0/1:44,5:22:99:128,0,385	0/1:29,11:35:99:349,0,648	0/1:44,28:66:99:1282,0,1772	0/1:26,15:35:2.03:2,0,640	0/1:10,12:23:99:422,0,409	0/1:28,12:35:99:285,0,413	0/1:16,10:25:99:192,0,283	0/1:15,15:26:99:334,0,221	0/1:22,11:27:99:475,0,718	0/1:18,4:21:99:124,0,446	0/1:13,5:17:99:276,0,427	0/0:9,0:3:9.03:0,9,183	0/0:36,0:32:20.97:0,21,536	0/0:10,0:7:5.70:0,6,153	0/1:30,9:36:99:135,0,681	0/1:30,9:35:99:125,0,749	0/1:20,2:15:22.09:22,0,214	1/1:17,0:13:8.82:61,9,0	0/1:43,13:42:99:625,0,1504	0/1:22,20:37:99:521,0,608	0/1:11,3:14:99:131,0,503
chr10	13277783	.	TGATAGATAGATAGA	T	3502.16	PASS	AB=0.915;AC=22;AF=0.393;AN=56;BaseQRankSum=7.598;DP=642;FS=31.407;HRun=0;HaplotypeScore=298.6011;InbreedingCoeff=-0.2569;MQ=42.67;MQ0=31;MQRankSum=-6.885;QD=7.98;ReadPosRankSum=-1.861;VQSLOD=1.2413;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:2,0:3:0.17:0,0,0	0/1:9,1:10:45.26:45,0,738	0/0:25,0:9:23.37:0,23,576	0/0:35,0:13:30.05:0,30,551	0/0:30,1:25:21.03:0,21,473	0/1:26,6:27:99:388,0,579	0/0:12,1:9:8.93:0,9,307	0/1:30,0:13:15.73:16,0,731	0/1:24,0:20:44.38:44,0,795	0/1:50,3:50:99:462,0,2106	0/1:21,4:24:14.83:15,0,742	0/1:19,2:21:99:260,0,493	1/1:14,2:12:6.02:159,6,0	0/1:17,3:19:99:170,0,132	1/1:21,5:22:12.93:386,13,0	0/1:23,4:21:99:404,0,619	0/0:17,0:18:5.28:0,5,265	0/0:13,0:13:21.07:0,21,740	0/1:3,0:3:19.06:42,0,19	0/0:29,0:29:24.20:0,24,1243	0/0:9,0:11:5.26:0,5,214	0/1:20,3:23:91.69:92,0,551	0/1:20,4:22:23.07:23,0,462	0/0:15,0:12:1.40:0,1,189	1/1:4,0:6:2.67:14,3,0	0/1:40,2:33:99:360,0,1664	0/1:25,9:30:99:531,0,196	0/1:16,1:17:90.64:91,0,842
chr10	13277794	.	TAG	T	1305.95	PASS	AB=0.906;AC=22;AF=0.393;AN=56;BaseQRankSum=7.745;DP=523;FS=41.635;HRun=0;HaplotypeScore=198.4578;InbreedingCoeff=-0.1461;MQ=44.54;MQ0=16;MQRankSum=-6.542;QD=4.02;ReadPosRankSum=-1.072;VQSLOD=1.5959;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:3,0:3:0:0,0,0	0/1:9,2:11:24.95:25,0,235	0/1:29,2:11:16.97:17,0,296	0/0:31,0:15:33.30:0,33,399	0/0:25,1:21:21.03:0,21,263	0/1:19,3:20:99:197,0,224	0/0:10,0:6:8.93:0,9,147	0/1:20,1:10:15.72:16,0,368	0/1:16,4:17:44.25:44,0,276	0/1:33,6:35:99:227,0,811	0/0:18,1:19:11.38:0,11,336	0/1:14,2:16:99:121,0,184	1/1:7,4:9:5.87:63,6,0	0/1:15,2:16:39.96:99,0,40	1/1:18,2:16:12.83:109,13,0	0/1:20,0:15:99:139,0,205	0/0:14,1:13:5.65:0,6,106	0/1:9,0:8:10.62:11,0,241	1/1:2,1:2:6.02:80,6,0	0/0:28,3:26:23.67:0,24,427	0/0:11,1:11:6.02:0,6,98	0/1:14,2:16:4.15:4,0,224	0/0:21,1:20:2.58:0,3,182	0/0:14,2:11:2.25:0,2,71	1/1:5,0:4:2.43:10,2,0	0/1:31,5:27:99:162,0,666	0/1:19,6:23:89.09:141,0,89	0/0:14,1:15:3.42:0,3,368
chr10	13277796	.	G	GAT	1629.76	PASS	AB=0.986;AC=20;AF=0.357;AN=56;BaseQRankSum=6.182;DP=502;FS=71.618;HRun=0;HaplotypeScore=189.0521;InbreedingCoeff=-0.2030;MQ=44.60;MQ0=14;MQRankSum=-5.063;QD=5.17;ReadPosRankSum=0.195;VQSLOD=0.4241;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:2,1:3:0:0,0,0	0/1:10,0:10:24.66:25,0,149	0/1:29,0:11:16.97:17,0,298	0/0:31,0:15:32.72:0,33,379	0/0:24,0:19:21.02:0,21,219	0/1:22,0:20:99:235,0,159	0/0:9,0:5:9.02:0,9,106	0/1:20,1:10:15.74:16,0,299	0/1:17,1:15:43.56:44,0,186	0/1:35,0:31:99:255,0,592	0/0:18,0:18:23.71:0,24,285	0/1:15,0:15:99:155,0,124	1/1:10,0:8:2.19:41,2,0	0/1:14,0:13:23.36:99,0,23	1/1:20,0:16:11.84:215,12,0	0/1:19,0:14:99:204,0,123	0/0:13,1:12:5.55:0,6,86	0/1:8,0:8:41.43:41,0,190	1/1:3,1:3:6.02:100,6,0	0/0:27,4:26:23.39:0,23,268	0/0:10,4:13:6.01:0,6,75	0/1:16,0:16:38.37:38,0,176	0/0:21,0:19:14.10:0,14,141	0/0:13,1:10:5.39:0,5,52	0/0:6,0:5:0.88:0,1,2	0/1:33,0:24:99:137,0,506	0/1:25,0:23:94.59:140,0,95	0/1:15,0:15:30.14:30,0,295
chr10	13277797	.	A	AT	42.28	PASS	AB=0.988;AC=7;AF=0.130;AN=54;BaseQRankSum=5.628;DP=484;FS=14.821;HRun=0;HaplotypeScore=186.3806;InbreedingCoeff=0.1905;MQ=44.79;MQ0=13;MQRankSum=-3.923;QD=0.60;ReadPosRankSum=2.141;VQSLOD=1.9389;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:10,0:10:16.30:0,16,212	0/0:28,0:11:28.02:0,28,345	0/0:31,0:15:32.75:0,33,351	0/0:23,0:19:20.64:0,21,274	0/0:21,0:19:18.19:0,18,248	0/0:9,0:5:9.03:0,9,126	0/0:19,2:10:25.33:0,25,349	0/0:18,0:15:19.27:0,19,254	0/0:33,1:30:32.37:0,32,740	0/0:18,0:18:23.51:0,24,295	0/1:14,1:15:73.33:73,0,152	0/1:9,0:7:0.71:2,0,1	0/0:13,1:13:5.53:0,6,48	1/1:18,0:14:5.68:28,6,0	0/0:18,0:13:13.58:0,14,214	0/0:11,2:11:6.02:0,6,85	0/1:8,0:7:27.52:28,0,196	0/1:4,0:3:1.11:1,0,16	0/0:22,3:20:24.05:0,24,335	0/0:15,0:13:6.02:0,6,84	0/1:16,0:16:23.25:23,0,191	0/0:20,0:18:13.44:0,13,173	0/0:14,1:10:6.96:0,7,84	0/0:5,1:5:1.55:0,2,4	0/0:32,0:23:14.95:0,15,589	0/0:25,0:23:9.58:0,10,131	0/0:15,0:15:17.17:0,17,308
chr10	13277801	.	A	AGAT	5378.45	PASS	AB=0.899;AC=32;AF=0.571;AN=56;BaseQRankSum=-6.041;DP=443;FS=17.121;HRun=0;HaplotypeScore=160.5836;InbreedingCoeff=-0.0181;MQ=45.13;MQ0=10;MQRankSum=2.457;QD=15.02;ReadPosRankSum=5.025;VQSLOD=3.4599;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:3,0:3:0:0,0,0	1/1:8,2:10:2.65:290,3,0	0/0:31,0:13:25.44:0,25,357	0/0:24,0:13:22.55:0,23,303	1/1:11,5:13:6.49:137,6,0	0/1:18,2:18:64.57:274,0,65	1/1:9,0:5:6.02:131,6,0	1/1:7,10:8:2.84:272,3,0	1/1:12,4:13:5.97:338,6,0	0/1:26,4:26:99:777,0,109	1/1:17,2:18:7.10:311,7,0	0/1:12,0:12:9.58:175,0,10	0/1:8,1:7:3.48:13,0,3	0/1:13,0:12:44.46:50,0,44	0/0:13,3:13:11.45:0,11,78	0/1:12,4:11:41.79:256,0,42	1/1:8,2:8:5.39:94,5,0	0/1:7,1:7:7.14:205,0,7	0/0:4,0:3:9.02:0,9,105	1/1:19,6:20:24.03:489,24,0	1/1:13,2:13:2.49:67,2,0	0/1:11,5:16:4.25:211,0,4	0/1:15,4:17:3.76:192,0,4	1/1:9,2:6:1.93:66,2,0	0/0:6,0:5:0.34:0,0,1	0/1:26,5:22:38.88:624,0,39	0/1:22,0:21:18.11:134,0,18	0/1:13,0:13:2.98:270,0,3
chr10	13277804	.	TA	T	2552.73	PASS	AB=0.725;AC=33;AF=0.611;AN=54;BaseQRankSum=-3.580;DP=413;FS=9.827;HRun=1;HaplotypeScore=154.1287;InbreedingCoeff=0.0483;MQ=44.23;MQ0=12;MQRankSum=1.488;QD=7.95;ReadPosRankSum=3.302;VQSLOD=0.4539;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/1:5,5:10:5.07:104,0,5	0/0:29,0:11:29.46:0,29,416	0/0:17,0:11:23.91:0,24,304	1/1:7,9:13:3.27:14,3,0	0/1:13,6:17:54.08:155,0,54	1/1:3,4:4:6.02:71,6,0	1/1:16,1:7:1.52:116,2,0	1/1:9,6:12:5.98:217,6,0	0/1:17,13:26:52.24:401,0,52	1/1:11,8:18:22.81:245,23,0	0/1:6,4:10:20.68:97,0,21	0/0:8,1:7:0.90:0,1,6	0/1:8,3:10:30.70:32,0,31	0/0:12,4:13:10.60:0,11,45	0/1:12,4:11:29.80:70,0,30	1/1:6,3:7:5.70:83,6,0	0/1:3,4:6:16.94:147,0,17	0/0:4,1:3:9.02:0,9,122	1/1:17,8:20:10.26:158,10,0	1/1:12,4:13:2.98:22,3,0	1/1:13,2:15:1.10:82,1,0	1/1:8,9:15:5.52:32,6,0	0/0:8,3:6:2.19:0,2,5	1/1:2,1:3:1.82:5,2,0	0/1:13,14:18:49.43:365,0,49	0/1:16,5:19:46.62:59,0,47	1/1:1,10:11:10.13:238,10,0
chr10	13277821	.	CGACA	C	1874.71	PASS	AB=0.933;AC=44;AF=0.846;AN=52;BaseQRankSum=3.358;DP=301;FS=2.224;HRun=0;HaplotypeScore=120.0621;InbreedingCoeff=0.2060;MQ=36.76;MQ0=8;MQRankSum=-0.245;QD=7.98;ReadPosRankSum=1.326;VQSLOD=2.8884;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,1:2:2.84:14,3,0	1/1:6,1:7:5.87:49,6,0	0/0:26,0:9:15.68:0,16,306	0/0:16,0:10:19:0,19,287	./.	1/1:11,3:13:13.99:110,14,0	1/1:5,1:3:5.93:66,6,0	./.	1/1:8,1:6:14.62:116,15,0	1/1:15,1:13:16.25:242,16,0	1/1:9,3:11:11.88:144,12,0	1/1:5,3:8:9:102,9,0	1/1:2,1:2:3.01:52,3,0	1/1:4,1:5:5.80:42,6,0	1/1:7,4:8:8.13:28,8,0	1/1:7,4:9:8.01:88,8,0	1/1:7,1:6:5.68:34,6,0	0/1:6,0:5:6.76:99,0,7	0/1:5,0:3:12.83:13,0,21	0/1:21,1:19:8.13:93,0,8	1/1:13,0:11:2.67:24,3,0	1/1:7,2:9:2.30:11,2,0	1/1:12,3:13:5.78:39,6,0	1/1:7,1:5:0.96:2,1,0	1/1:3,0:3:2.94:18,3,0	0/1:15,2:11:21.17:252,0,21	1/1:4,8:11:14.53:198,15,0	1/1:6,2:8:17.53:176,18,0
chr10	13277833	.	A	AGGT	472.92	PASS	AB=0.974;AC=19;AF=0.365;AN=52;BaseQRankSum=0.283;DP=294;FS=14.175;HRun=0;HaplotypeScore=119.2791;InbreedingCoeff=-0.1975;MQ=34.39;MQ0=28;MQRankSum=-0.067;QD=2.78;ReadPosRankSum=-0.767;VQSLOD=1.4938;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:2:2.98:0,3,22	1/1:6,0:6:2.17:11,2,0	0/0:34,0:8:24.08:0,24,396	0/0:16,0:8:17.23:0,17,326	./.	0/1:12,0:12:14.52:15,0,16	0/1:6,0:3:0.10:0,0,0	./.	1/1:8,0:6:2.70:26,3,0	0/1:13,0:10:62.42:69,0,62	0/1:15,0:14:5.20:40,0,5	0/1:9,0:7:34.86:35,0,37	0/0:4,0:2:4.26:0,4,54	0/1:4,0:4:5.66:6,0,34	0/0:8,0:7:2.04:0,2,6	0/1:12,0:11:37:37,0,43	0/0:5,0:5:0.88:0,1,48	0/1:7,0:7:0.96:1,0,54	0/1:5,2:3:43.84:132,0,44	0/1:16,4:15:23.68:24,0,94	0/0:9,4:10:0:0,0,1	0/1:7,0:5:0:0,0,0	0/0:14,0:12:3.26:0,3,15	0/1:8,0:6:0.14:0,0,0	0/0:3,0:3:0:0,0,0	0/1:16,0:12:71.12:71,0,248	0/1:12,0:11:14.43:14,0,53	0/1:8,0:8:20.14:115,0,20
chr10	13277840	.	TGATA	T	462.11	PASS	AB=0.811;AC=20;AF=0.400;AN=50;BaseQRankSum=0.973;DP=257;FS=1.166;HRun=0;HaplotypeScore=97.6473;InbreedingCoeff=0.0858;MQ=29.94;MQ0=35;MQRankSum=-0.695;QD=4.24;ReadPosRankSum=-1.659;VQSLOD=1.5255;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:1,0:2:3.01:31,3,0	0/1:2,1:3:44.06:44,0,50	0/0:34,0:7:15.01:0,15,270	0/0:18,0:7:17.97:0,18,276	./.	0/0:7,2:8:4.53:0,5,26	./.	./.	0/0:6,1:5:2.04:0,2,6	0/1:4,1:3:45.19:47,0,45	1/1:7,6:13:2.99:24,3,0	0/0:5,3:5:3.01:0,3,37	1/1:3,2:2:3.01:53,3,0	0/0:4,0:4:3.01:0,3,40	0/0:6,0:5:3.28:0,3,9	0/1:6,4:9:63.85:91,0,64	0/1:4,1:5:43.57:44,0,76	0/0:6,0:6:8.06:0,8,111	0/0:6,0:3:5.95:0,6,109	0/0:19,0:14:6.49:0,6,153	0/1:10,0:7:0:0,0,0	0/0:3,4:5:0:0,0,0	1/1:10,1:10:1.88:22,2,0	0/1:2,2:4:0:0,0,0	1/1:2,0:3:2.68:11,3,0	0/1:7,3:10:99:140,0,150	1/1:10,1:10:3.01:53,3,0	0/1:2,1:7:37.50:38,0,122
chr10	13277853	.	GACCGACAGAC	G	190.70	PASS	AB=0.886;AC=7;AF=0.146;AN=48;BaseQRankSum=-0.445;DP=233;FS=4.365;HRun=0;HaplotypeScore=73.7719;InbreedingCoeff=0.0637;MQ=27.86;MQ0=39;MQRankSum=-0.648;QD=4.24;ReadPosRankSum=0.801;VQSLOD=1.1340;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:2:3.89:0,4,36	0/0:2,0:2:5.91:0,6,73	0/0:29,0:5:15.05:0,15,498	0/0:18,0:5:15.02:0,15,249	./.	0/1:9,1:5:17.59:95,0,18	./.	./.	0/0:4,2:2:2.98:0,3,21	0/0:5,0:1:3.01:0,3,89	1/1:12,0:10:3.01:39,3,0	./.	0/0:5,1:1:3.01:0,3,86	0/0:5,1:5:3.90:0,4,88	0/0:6,0:3:3.45:0,3,23	0/0:8,1:7:11.79:0,12,237	0/0:6,0:5:8.31:0,8,337	0/1:2,1:3:56.46:94,0,56	0/0:6,0:3:9.03:0,9,297	0/0:20,0:16:7.68:0,8,326	0/0:7,2:6:0.47:0,0,1	0/0:8,0:3:3.90:0,4,52	1/1:7,0:4:0.05:32,0,0	0/0:5,0:4:3.34:0,3,12	0/0:5,0:4:3.81:0,4,19	0/1:13,0:8:39.92:40,0,434	0/0:3,0:2:2.84:0,3,90	0/0:6,0:6:18.06:0,18,610
chr10	13277871	.	T	TGATA	1293.26	PASS	AB=0.752;AC=26;AF=0.542;AN=48;BaseQRankSum=1.243;DP=269;FS=10.877;HRun=0;HaplotypeScore=76.1333;InbreedingCoeff=0.2138;MQ=32.02;MQ0=34;MQRankSum=-1.524;QD=8.45;ReadPosRankSum=1.978;VQSLOD=1.4185;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:7,0:4:0.02:0,0,0	1/1:1,2:2:0.98:33,1,0	0/0:31,0:11:30.09:0,30,460	0/0:15,0:4:9.50:0,9,132	./.	0/1:5,4:7:0.10:0,0,3	./.	./.	0/0:5,2:3:0.39:0,0,1	1/1:3,3:7:21.04:347,21,0	0/0:0,11:11:0.47:0,0,1	0/0:1,7:3:0.47:0,0,1	1/1:3,6:7:2.87:35,3,0	1/1:2,5:8:2.68:11,3,0	0/0:1,5:5:0.45:0,0,1	0/1:4,7:11:13.21:155,0,13	0/1:0,2:4:27.26:27,0,47	1/1:1,1:3:1.03:71,1,0	0/1:2,0:2:1.85:2,0,43	1/1:21,0:16:5.37:50,5,0	0/0:5,0:2:0:0,0,0	1/1:2,9:6:2.69:74,3,0	./.	0/1:0,4:5:0:0,0,0	1/1:8,0:7:1.69:3,2,0	1/1:4,8:9:21.03:464,21,0	0/1:4,2:4:4.09:67,0,4	0/1:4,1:7:1.40:70,0,1
chr10	13277887	.	CGACG	C	1645.41	PASS	AB=0.894;AC=37;AF=0.740;AN=50;BaseQRankSum=4.055;DP=285;FS=35.290;HRun=0;HaplotypeScore=86.0110;InbreedingCoeff=0.2760;MQ=38.83;MQ0=16;MQRankSum=-1.321;QD=7.65;ReadPosRankSum=-2.745;VQSLOD=0.2999;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:2:1.25:0,1,3	1/1:3,1:2:3.01:34,3,0	0/0:26,0:14:39.74:0,40,727	0/0:19,0:10:22.93:0,23,477	1/1:10,3:9:3:25,3,0	1/1:9,3:7:0.67:65,1,0	./.	./.	1/1:9,2:7:11.83:169,12,0	1/1:6,6:8:19.57:292,20,0	1/1:14,3:15:8.96:170,9,0	1/1:9,0:4:2.72:13,3,0	1/1:12,6:12:18.83:121,19,0	1/1:7,2:8:8.25:83,8,0	0/1:7,2:5:0:0,0,0	1/1:12,4:14:20.16:209,20,0	1/1:3,2:4:8.96:111,9,0	0/1:2,1:3:5.79:42,0,6	0/1:2,0:2:6.47:15,0,6	0/1:20,0:16:0.14:18,0,0	./.	1/1:12,2:8:2.28:59,2,0	1/1:8,1:6:3:27,3,0	1/1:4,2:5:0.55:2,1,0	0/0:7,1:6:0.47:0,0,1	1/1:10,4:12:22.15:268,22,0	0/1:8,1:7:34.33:34,0,38	1/1:1,2:3:2.92:16,3,0
chr10	13277906	.	TGATA	T	38.46	PASS	AB=1.000;AC=6;AF=0.115;AN=52;BaseQRankSum=2.948;DP=389;FS=1.628;HRun=0;HaplotypeScore=139.2162;InbreedingCoeff=0.3523;MQ=36.19;MQ0=25;MQRankSum=-1.169;QD=1.04;ReadPosRankSum=-2.596;VQSLOD=1.6946;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:6:2.80:0,3,11	0/1:6,0:4:0:0,0,0	0/0:21,0:8:6.65:0,7,129	0/0:21,0:13:23.79:0,24,298	0/0:21,0:17:3.01:0,3,74	0/0:13,0:8:11.91:0,12,136	0/0:14,0:9:9.01:0,9,125	0/0:11,0:6:18.06:0,18,443	0/0:16,0:13:23.83:0,24,467	0/0:23,0:19:51.07:0,51,1146	0/0:19,0:17:8.72:0,9,223	0/0:12,0:8:5.23:0,5,49	0/0:20,0:14:6.94:0,7,288	0/0:12,0:10:8.77:0,9,165	0/0:13,0:10:5.81:0,6,95	0/0:21,0:18:23.57:0,24,435	0/1:6,0:5:13.14:13,0,37	0/0:6,0:5:6.02:0,6,118	1/1:1,1:1:3.01:51,3,0	1/1:12,11:19:6.45:77,6,0	./.	0/0:20,0:13:2.99:0,3,75	0/0:10,0:7:3.01:0,3,75	./.	0/0:8,0:6:0:0,0,0	0/0:19,0:16:30.56:0,31,677	0/0:14,0:13:17.97:0,18,380	0/0:6,0:6:11.93:0,12,186
chr10	13277939	.	G	GAC	309.03	PASS	AB=0.893;AC=14;AF=0.259;AN=54;BaseQRankSum=6.649;DP=420;FS=0.959;HRun=0;HaplotypeScore=171.9351;InbreedingCoeff=-0.2295;MQ=35.84;MQ0=15;MQRankSum=-3.271;QD=1.73;ReadPosRankSum=0.262;VQSLOD=2.7157;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:4,2:9:30.05:71,0,30	./.	0/0:28,0:14:42.02:0,42,561	0/0:21,0:12:28.49:0,28,448	0/0:22,0:18:2.80:0,3,45	0/1:13,0:9:10.24:10,0,37	0/0:16,0:11:8.94:0,9,86	0/1:20,1:17:12.65:13,0,597	0/0:15,1:13:12.39:0,12,294	0/0:26,2:22:2.85:0,3,800	0/0:17,0:17:7.91:0,8,136	0/1:8,1:8:4.26:58,0,4	0/1:23,0:20:33.05:33,0,225	0/0:10,0:9:5.56:0,6,91	0/1:18,1:16:36.85:60,0,37	0/1:19,0:18:28.61:29,0,334	0/1:6,0:6:17.48:17,0,34	0/1:4,0:4:36.69:54,0,37	0/0:6,0:2:6.02:0,6,86	0/1:18,0:19:9.14:9,0,76	1/1:3,0:3:0.47:1,0,0	0/0:16,0:12:0.64:0,1,42	0/0:18,0:16:2.35:0,2,45	0/1:8,0:4:0.13:0,0,0	0/0:3,1:4:0:0,0,0	0/0:22,1:21:1.34:0,1,630	0/1:12,2:12:83.28:83,0,170	0/0:6,0:6:8.92:0,9,132
chr10	13277940	.	A	AT	51.71	PASS	AB=0.933;AC=9;AF=0.167;AN=54;BaseQRankSum=5.316;DP=404;FS=2.853;HRun=0;HaplotypeScore=162.7041;InbreedingCoeff=-0.0204;MQ=36.29;MQ0=15;MQRankSum=-0.445;QD=0.49;ReadPosRankSum=0.345;VQSLOD=2.6776;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:10,0:10:3.64:4,0,4	./.	0/0:27,0:14:42.02:0,42,523	0/0:21,0:12:29.81:0,30,419	0/0:20,0:17:2.63:0,3,42	0/0:11,0:8:4.83:0,5,47	0/0:16,0:11:9.03:0,9,120	0/0:21,0:17:44.51:0,45,595	0/0:13,0:12:20.82:0,21,295	0/0:27,0:22:59.69:0,60,805	0/0:17,0:17:7.15:0,7,124	0/1:10,0:8:30.26:30,0,38	0/1:22,1:20:57.27:57,0,227	0/0:10,1:10:5.64:0,6,84	0/1:18,2:16:17.25:17,0,39	0/0:20,0:16:7.42:0,7,315	0/0:5,1:5:8.36:0,8,56	0/1:2,2:3:38.90:39,0,41	0/0:6,0:2:6.02:0,6,78	0/0:22,0:20:6.02:0,6,77	0/0:6,0:3:0:0,0,0	0/0:14,0:12:1.51:0,2,41	0/0:17,0:16:1.14:0,1,40	0/0:5,3:4:0:0,0,0	1/1:4,0:3:2.04:6,2,0	0/1:24,0:22:7.90:8,0,621	0/1:11,0:9:6.84:7,0,153	0/0:6,0:6:9.03:0,9,125
chr10	13277947	.	T	TA	460.14	PASS	AB=0.795;AC=12;AF=0.214;AN=56;BaseQRankSum=7.409;DP=408;FS=3.510;HRun=1;HaplotypeScore=166.5863;InbreedingCoeff=0.0249;MQ=36.23;MQ0=18;MQRankSum=-3.067;QD=3.07;ReadPosRankSum=2.898;VQSLOD=0.3478;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,1:14:7.97:64,8,0	0/0:7,1:6:2.96:0,3,19	0/0:24,1:14:34.76:0,35,480	0/0:20,0:12:28.31:0,28,371	0/0:20,0:17:2.63:0,3,42	0/1:11,2:8:16.31:16,0,36	0/0:14,1:11:9.03:0,9,126	0/0:17,0:15:20.17:0,20,463	0/1:12,2:13:1.75:2,0,230	0/0:27,0:22:42.34:0,42,779	0/0:22,0:20:7.15:0,7,125	1/1:6,2:8:8.52:103,9,0	0/1:17,3:19:99:133,0,216	0/0:6,4:9:5.65:0,6,83	0/1:14,6:17:32.82:45,0,33	0/1:14,5:15:23.44:23,0,269	0/0:1,3:4:5.43:0,5,24	0/1:1,1:3:32.92:57,0,33	0/0:7,0:2:6.02:0,6,84	0/0:22,1:20:6.02:0,6,84	0/0:3,0:3:0:0,0,0	0/0:14,0:12:1.51:0,2,40	0/0:20,0:17:4.14:0,4,71	0/0:3,4:5:0.47:0,0,1	0/0:2,1:3:0:0,0,0	0/1:21,4:24:99:122,0,606	0/1:8,3:9:32.81:33,0,152	0/0:7,0:7:9.03:0,9,126
chr10	13277953	.	AT	A	250.37	PASS	AB=0.779;AC=10;AF=0.185;AN=54;BaseQRankSum=6.407;DP=391;FS=3.969;HRun=1;HaplotypeScore=155.4990;InbreedingCoeff=-0.1882;MQ=33.77;MQ0=22;MQRankSum=-2.992;QD=1.79;ReadPosRankSum=2.498;VQSLOD=-0.5077;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:12,2:14:7.34:37,0,7	0/0:8,0:6:2.98:0,3,22	0/0:23,0:12:14.33:0,14,353	0/0:21,0:11:29.73:0,30,382	0/0:18,1:16:2.59:0,3,47	0/1:13,3:9:8.26:8,0,42	0/0:16,0:11:8.64:0,9,144	0/0:14,0:11:27.04:0,27,403	0/0:11,3:13:6.24:0,6,141	0/0:27,0:22:44.06:0,44,655	0/0:19,0:17:8.15:0,8,141	0/1:5,3:7:20.84:61,0,21	0/1:17,4:19:95.02:95,0,200	0/0:5,4:8:5.86:0,6,96	0/1:11,8:16:14.31:14,0,19	0/1:13,5:14:17.96:18,0,184	0/1:3,2:4:0.02:0,0,24	0/1:3,1:3:32.21:32,0,46	0/0:9,0:3:8.96:0,9,91	0/0:20,0:17:5.65:0,6,69	0/0:6,0:3:0:0,0,0	0/0:11,0:9:2.38:0,2,47	0/0:20,0:17:4.85:0,5,71	./.	0/0:2,0:2:0:0,0,0	0/1:20,4:23:84.62:85,0,360	0/1:5,6:9:26.89:27,0,103	0/0:6,1:7:8.96:0,9,68
chr10	13277954	.	TGATA	T	2190.91	PASS	AB=0.755;AC=35;AF=0.648;AN=54;BaseQRankSum=-2.797;DP=395;FS=3.313;HRun=0;HaplotypeScore=154.2669;InbreedingCoeff=0.2031;MQ=33.53;MQ0=25;MQRankSum=-0.660;QD=6.54;ReadPosRankSum=0.283;VQSLOD=2.7327;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:10,0:14:4.42:23,4,0	1/1:1,6:6:3.01:49,3,0	0/1:22,0:11:0:0,0,0	0/0:20,0:10:9.02:0,9,120	0/1:8,11:16:0.35:0,0,0	0/1:9,7:9:0:0,0,0	0/0:13,2:11:3.01:0,3,50	0/0:16,0:12:1.55:0,2,4	1/1:7,7:13:18.17:269,18,0	1/1:14,14:23:30.10:490,30,0	0/1:10,9:17:0.66:1,0,1	1/1:7,1:7:4.99:64,5,0	0/1:13,8:19:31.79:175,0,32	0/1:8,2:9:0.01:0,0,0	1/1:13,7:16:5.78:67,6,0	1/1:12,7:14:14.31:236,14,0	1/1:4,0:4:2.37:21,2,0	0/1:3,1:3:40.27:40,0,41	0/1:6,3:3:39.97:43,0,40	1/1:10,7:16:3.48:50,3,0	0/0:4,2:3:0.47:0,0,1	0/1:5,6:9:0:0,0,1	1/1:8,12:17:1.72:35,2,0	0/1:4,1:3:0:0,0,0	./.	0/1:12,11:22:11.55:461,0,12	1/1:9,3:9:7.55:141,8,0	1/1:4,3:7:9.03:148,9,0
chr10	13277958	.	A	AGAT	121.87	PASS	AB=0.968;AC=11;AF=0.196;AN=56;BaseQRankSum=1.798;DP=391;FS=20.453;HRun=0;HaplotypeScore=158.5483;InbreedingCoeff=-0.0083;MQ=33.09;MQ0=31;MQRankSum=-0.630;QD=1.01;ReadPosRankSum=-2.200;VQSLOD=1.2204;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:14,0:14:20.46:20,0,36	1/1:8,0:6:3.01:49,3,0	0/0:22,0:10:14.13:0,14,275	0/0:19,0:8:11.39:0,11,173	0/0:17,0:14:2.94:0,3,46	0/0:17,0:9:5.05:0,5,52	0/0:15,0:10:9.03:0,9,138	0/1:20,0:11:23.58:24,0,169	0/0:13,1:13:19.35:0,19,148	0/0:27,0:22:1.47:0,1,341	0/0:18,1:18:5.94:0,6,92	0/1:5,1:5:21.75:34,0,22	0/0:21,0:19:17.61:0,18,171	0/0:10,0:9:6.02:0,6,92	0/1:17,1:14:18.06:22,0,18	0/0:20,0:14:22.83:0,23,203	0/1:5,0:4:6.74:10,0,7	0/0:5,0:4:2.97:0,3,22	0/0:9,0:3:9:0,9,116	0/0:17,0:14:6.43:0,6,44	0/0:6,0:3:0:0,0,0	0/0:12,0:8:3.01:0,3,46	0/1:18,2:16:30.93:31,0,40	0/1:6,0:3:0:0,0,0	0/1:2,0:2:0:0,0,0	0/1:22,0:20:57.64:58,0,186	0/0:10,2:9:14.33:0,14,122	0/0:7,0:7:8.79:0,9,56
chr10	13277961	.	TA	T	452.66	PASS	AB=0.805;AC=15;AF=0.278;AN=54;BaseQRankSum=5.601;DP=386;FS=1.102;HRun=1;HaplotypeScore=145.1364;InbreedingCoeff=-0.0455;MQ=29.99;MQ0=35;MQRankSum=-1.765;QD=2.60;ReadPosRankSum=3.810;VQSLOD=-0.1342;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:11,3:14:29.82:36,0,30	0/0:8,0:6:0.47:0,0,1	0/0:21,0:9:12.10:0,12,273	0/0:16,0:6:12.04:0,12,190	0/0:16,1:14:2.59:0,3,45	0/1:14,3:8:8.26:8,0,40	0/0:13,1:9:9.03:0,9,140	0/1:19,2:9:23.40:23,0,198	0/1:12,2:13:5.54:6,0,22	0/0:25,1:21:20.16:0,20,218	0/0:21,0:18:4.89:0,5,89	1/1:3,3:5:0.52:92,1,0	0/1:14,5:17:76.33:146,0,76	0/0:5,5:9:5.85:0,6,91	0/1:10,8:14:6:13,0,6	0/1:14,6:14:28.21:28,0,90	1/1:2,3:4:0.55:4,1,0	1/1:3,2:4:5.82:83,6,0	0/0:9,0:3:6.49:0,6,94	0/0:16,1:14:3.13:0,3,22	0/0:3,3:3:0:0,0,0	0/0:11,0:7:2.38:0,2,45	0/0:20,0:15:4.46:0,4,55	./.	0/0:2,0:2:0:0,0,0	0/1:18,5:20:99:113,0,104	0/1:7,5:9:32.47:32,0,43	0/0:6,1:7:1.41:0,1,2
chr10	13277997	.	T	TGATA	52.15	PASS	AB=0.918;AC=9;AF=0.196;AN=46;BaseQRankSum=1.890;DP=344;FS=0.000;HRun=0;HaplotypeScore=118.3520;InbreedingCoeff=0.2545;MQ=24.45;MQ0=47;MQRankSum=-0.145;QD=0.63;ReadPosRankSum=1.430;VQSLOD=1.7887;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:14:0.41:0,0,1	0/0:7,0:5:8.47:0,8,77	./.	./.	0/1:13,1:8:0.09:0,0,0	0/1:14,2:7:0.46:0,0,71	./.	0/0:24,0:7:15.05:0,15,237	0/0:9,1:8:7.15:0,7,70	0/0:19,0:11:15.05:0,15,226	0/0:18,0:12:1.01:0,1,3	./.	0/1:12,1:11:44.72:45,0,139	0/0:5,2:7:0:0,0,0	0/0:14,3:12:9.80:0,10,50	0/0:11,4:8:13.11:0,13,112	./.	1/1:5,0:4:3.01:54,3,0	0/0:2,1:1:2.97:0,3,20	0/0:16,0:12:2.97:0,3,20	0/1:6,0:4:0:0,0,0	0/0:15,0:10:12:0,12,174	0/0:22,0:12:10.17:0,10,68	0/1:4,0:3:0:0,0,0	0/1:1,0:1:0:0,0,0	0/1:19,2:16:46.13:46,0,418	0/0:9,2:5:6.02:0,6,102	0/0:8,0:7:14.55:0,15,153
chr10	13278041	.	GACCA	G	175.43	PASS	AB=0.944;AC=9;AF=0.188;AN=48;BaseQRankSum=2.178;DP=268;FS=5.610;HRun=0;HaplotypeScore=59.8601;InbreedingCoeff=0.1885;MQ=30.15;MQ0=43;MQRankSum=-2.498;QD=2.54;ReadPosRankSum=-1.599;VQSLOD=0.8507;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:10,3:9:4.81:64,5,0	0/1:5,0:4:27.01:27,0,60	0/0:20,0:4:7.58:0,8,134	0/0:20,0:6:14.54:0,15,298	0/1:16,0:8:0:0,0,0	0/0:13,1:6:2.34:0,2,6	0/0:6,0:3:2.88:0,3,15	0/0:13,0:10:8.81:0,9,64	0/0:5,0:1:1.25:0,1,3	0/0:18,0:11:17.10:0,17,319	0/0:12,0:6:6.01:0,6,120	0/0:4,0:1:3.01:0,3,68	0/0:7,0:3:6.85:0,7,76	./.	0/1:8,1:5:50.99:94,0,51	1/1:8,1:6:1.20:49,1,0	./.	0/0:2,0:2:3.01:0,3,65	0/0:4,0:1:3.01:0,3,40	0/0:10,0:9:0:0,0,0	0/1:8,0:8:0.04:0,0,0	0/0:19,0:15:15.93:0,16,287	0/0:16,2:9:8.55:0,9,168	./.	./.	0/1:7,2:7:50.84:51,0,128	0/0:11,0:3:9.03:0,9,191	0/0:6,0:5:8.95:0,9,139
chr10	13278080	.	TGATAGACA	T	2643.20	PASS	AB=0.812;AC=34;AF=0.630;AN=54;BaseQRankSum=-0.280;DP=412;FS=9.790;HRun=0;HaplotypeScore=134.2128;InbreedingCoeff=0.1485;MQ=51.68;MQ0=26;MQRankSum=-1.319;QD=8.67;ReadPosRankSum=2.246;VQSLOD=1.6575;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:5:3.01:0,3,50	1/1:6,4:9:0.13:112,0,0	0/0:26,0:19:32.27:0,32,454	0/0:13,0:8:4.82:0,5,31	0/0:13,14:19:0.45:0,0,6	1/1:10,7:13:3.30:83,3,0	0/1:4,7:6:22.13:32,0,22	1/1:26,1:16:3.50:127,4,0	1/1:6,6:3:3.48:34,3,0	0/1:17,13:24:99:686,0,100	0/0:7,5:9:2.76:0,3,26	1/1:10,2:7:6.95:96,7,0	0/0:8,1:5:2.22:0,2,7	1/1:2,2:4:3.01:73,3,0	1/1:7,7:11:9:161,9,0	1/1:6,3:7:3.01:82,3,0	0/1:11,0:8:16.42:16,0,77	1/1:4,0:3:2.98:21,3,0	0/0:6,0:1:3.01:0,3,54	1/1:8,10:16:5.33:22,5,0	1/1:17,5:16:2.70:12,3,0	1/1:15,14:24:5.97:51,6,0	1/1:14,8:19:8.93:76,9,0	./.	0/1:2,0:2:0:0,0,0	0/1:10,12:18:56.86:779,0,57	1/1:9,9:11:10.26:218,10,0	0/1:10,1:11:99:109,0,174
chr10	13278083	.	TAGAC	T	1142.71	PASS	AB=0.899;AC=29;AF=0.537;AN=54;BaseQRankSum=2.669;DP=404;FS=7.863;HRun=0;HaplotypeScore=127.5683;InbreedingCoeff=0.2401;MQ=50.42;MQ0=26;MQRankSum=-2.322;QD=4.43;ReadPosRankSum=3.512;VQSLOD=1.4246;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:6,2:4:2.68:0,3,11	0/1:10,0:9:1.92:42,0,2	0/0:27,0:19:33.36:0,33,320	0/0:11,0:6:2.12:0,2,25	0/0:24,3:19:1.34:0,1,4	1/1:17,0:13:3.37:33,3,0	0/1:10,1:6:6.26:12,0,6	1/1:25,2:15:20.96:202,21,0	1/1:11,0:2:0.47:1,0,0	1/1:28,0:23:0.56:264,1,0	0/0:13,0:10:1.11:0,1,3	0/1:10,1:7:0.82:7,0,1	0/0:9,0:5:2.37:0,2,8	1/1:4,0:4:3:25,3,0	1/1:13,0:10:8.94:74,9,0	1/1:8,0:6:3.01:32,3,0	0/1:11,0:8:15.23:15,0,29	1/1:4,0:3:2.98:21,3,0	0/0:5,0:1:2.50:0,2,9	0/0:19,0:17:5.09:0,5,19	0/0:19,3:16:2.30:0,2,9	1/1:30,0:25:5.73:50,6,0	1/1:21,0:18:8.84:75,9,0	./.	0/1:0,2:2:0:0,0,0	0/1:21,1:18:0.52:294,0,1	1/1:17,0:10:8.86:80,9,0	0/1:11,0:11:25.33:52,0,25
chr10	13278086	.	AC	A	1306.40	PASS	AB=0.748;AC=33;AF=0.611;AN=54;BaseQRankSum=0.847;DP=379;FS=0.000;HRun=1;HaplotypeScore=114.5690;InbreedingCoeff=0.1369;MQ=51.02;MQ0=24;MQRankSum=-4.327;QD=5.18;ReadPosRankSum=5.347;VQSLOD=0.4778;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,5:4:3.01:39,3,0	0/1:4,5:8:19.10:37,0,19	0/0:27,0:16:41.82:0,42,553	0/0:11,0:6:1.72:0,2,47	1/1:18,9:19:2.98:39,3,0	1/1:9,7:13:2.18:7,2,0	0/1:9,2:6:21.54:33,0,22	0/0:25,1:16:16.32:0,16,143	1/1:6,5:2:2.84:15,3,0	0/1:17,8:21:34.54:294,0,35	1/1:8,3:8:2.98:39,3,0	1/1:4,6:7:5.98:77,6,0	1/1:3,4:3:3.01:39,3,0	1/1:2,2:4:3.01:36,3,0	0/0:8,3:10:1.24:0,1,35	1/1:6,1:6:2.22:7,2,0	0/1:4,6:8:3.93:141,0,4	0/0:3,1:3:3:0,3,25	1/1:2,3:1:3.01:39,3,0	1/1:13,5:16:5.94:78,6,0	1/1:14,8:16:2.93:39,3,0	0/0:19,7:21:5.72:0,6,42	0/0:12,6:18:8.74:0,9,63	./.	0/1:4,0:4:0:0,0,0	1/1:15,6:18:3.09:271,3,0	0/1:10,5:9:9.44:9,0,15	0/1:4,7:11:22.37:214,0,22
chr10	13278151	.	A	AGAT	3163.66	PASS	AB=0.909;AC=21;AF=0.389;AN=54;BaseQRankSum=3.644;DP=673;FS=9.995;HRun=0;HaplotypeScore=194.7421;InbreedingCoeff=-0.2211;MQ=29.63;MQ0=72;MQRankSum=-1.798;QD=8.09;ReadPosRankSum=5.649;VQSLOD=1.6696;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:39:35.57:0,36,532	0/1:11,2:10:79.13:124,0,79	0/0:33,0:2:6.02:0,6,98	./.	0/1:29,3:20:59.15:59,0,91	0/1:18,4:17:32.41:318,0,32	0/0:15,1:8:3.01:0,3,50	0/1:27,0:12:14.86:15,0,364	0/1:16,2:9:11.09:165,0,11	0/1:40,6:32:99:495,0,793	0/1:23,4:20:44.37:62,0,44	1/1:15,5:14:9.91:204,10,0	0/1:11,0:8:99:119,0,132	1/1:11,0:9:9.01:202,9,0	0/1:19,1:15:44.24:62,0,44	0/1:16,3:15:29.14:384,0,29	0/0:17,0:15:19.96:0,20,330	0/1:8,1:8:53.08:53,0,113	0/0:16,0:5:9.03:0,9,143	0/0:34,0:22:14.82:0,15,243	0/1:33,0:20:36.65:37,0,413	0/1:16,2:13:0.04:0,0,0	0/0:24,3:20:2.81:0,3,44	1/1:9,3:11:3:68,3,0	0/0:53,0:45:54.03:0,54,826	0/1:23,4:17:99:346,0,441	0/1:22,4:20:99:608,0,108	0/0:10,1:11:18.04:0,18,272
chr10	13278162	.	TAG	T	126.22	PASS	AB=0.860;AC=11;AF=0.204;AN=54;BaseQRankSum=7.062;DP=643;FS=13.225;HRun=0;HaplotypeScore=193.1609;InbreedingCoeff=-0.0822;MQ=29.89;MQ0=70;MQRankSum=-4.123;QD=0.58;ReadPosRankSum=5.868;VQSLOD=0.9074;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:51,1:44:22.71:23,0,502	0/0:12,0:9:9.02:0,9,162	0/0:32,1:2:6.02:0,6,98	./.	0/0:24,3:17:9.03:0,9,164	0/1:17,2:14:2.71:3,0,171	0/0:15,0:9:9.03:0,9,164	0/0:24,0:8:21.05:0,21,356	0/1:14,2:9:5.26:5,0,165	0/1:36,4:27:5.08:5,0,874	0/0:23,5:19:6.02:0,6,104	0/1:14,3:12:8.72:9,0,68	0/1:7,3:7:24.15:24,0,130	1/1:6,3:8:8.89:59,9,0	0/0:13,4:12:5.98:0,6,76	0/1:14,6:16:50.93:51,0,214	0/0:14,2:14:21.95:0,22,384	0/1:9,1:9:1.54:2,0,249	0/0:17,0:4:9.03:0,9,163	0/0:32,0:20:15.03:0,15,245	0/0:27,1:18:33.08:0,33,563	0/0:14,1:11:2.81:0,3,54	0/0:19,5:17:3.01:0,3,55	0/0:11,1:11:3.01:0,3,55	0/0:57,0:49:53.20:0,53,853	0/0:25,1:16:22.84:0,23,559	0/1:17,8:19:75.83:76,0,251	0/0:10,0:10:14.21:0,14,239
chr10	13278172	.	TGATAGATA	T	2543.60	PASS	AB=0.886;AC=19;AF=0.352;AN=54;BaseQRankSum=3.498;DP=562;FS=26.940;HRun=0;HaplotypeScore=182.9302;InbreedingCoeff=0.0568;MQ=30.23;MQ0=66;MQRankSum=-5.121;QD=11.41;ReadPosRankSum=0.750;VQSLOD=1.0540;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:48:27.23:0,27,841	0/0:7,0:5:3:0,3,70	./.	0/0:32,0:2:3.01:0,3,89	0/0:19,0:12:3.01:0,3,72	1/1:11,3:9:12.04:226,12,0	0/0:9,1:8:6.02:0,6,143	0/0:19,0:7:9.02:0,9,155	0/1:11,0:7:99:102,0,184	0/1:30,0:19:99:264,0,606	1/1:21,3:17:0.47:1,0,0	1/1:14,3:13:6.94:119,7,0	0/1:8,1:6:99:144,0,128	1/1:9,0:8:9.01:234,9,0	1/1:12,2:9:6.02:73,6,0	0/1:15,3:15:69.19:436,0,69	0/0:14,0:15:12.49:0,12,284	0/1:5,2:9:99:135,0,189	0/0:12,0:3:6.02:0,6,144	0/0:18,2:17:6:0,6,97	0/0:21,0:16:3.71:0,4,303	0/0:11,0:7:2.97:0,3,67	0/0:15,0:11:3.01:0,3,72	0/1:8,2:11:0:0,0,0	0/0:49,0:50:53.11:0,53,1777	0/1:18,2:14:99:368,0,181	0/1:21,1:16:99:482,0,255	0/1:9,0:10:85.15:112,0,85
chr10	13278179	.	TA	T	3126.77	PASS	AB=0.706;AC=33;AF=0.611;AN=54;BaseQRankSum=0.085;DP=549;FS=8.132;HRun=1;HaplotypeScore=157.8003;InbreedingCoeff=-0.3735;MQ=31.19;MQ0=76;MQRankSum=-3.057;QD=6.93;ReadPosRankSum=2.755;VQSLOD=0.5802;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:41,16:50:99:247,0,293	0/1:4,4:6:35.83:36,0,40	./.	0/0:32,0:2:3.01:0,3,48	0/1:11,10:13:36.83:58,0,37	0/1:8,7:10:47.17:47,0,111	1/1:9,5:10:9.01:109,9,0	0/1:13,6:6:35.38:74,0,35	1/1:6,7:9:3.58:197,4,0	0/1:16,16:20:78.66:528,0,79	0/0:11,12:15:3.01:0,3,46	0/1:10,5:12:47.71:48,0,51	1/1:2,6:6:11.96:125,12,0	1/1:4,5:7:8.81:65,9,0	0/1:9,7:11:15.94:16,0,46	0/1:9,10:15:44.69:175,0,45	0/1:7,7:13:31.17:153,0,31	0/1:6,2:8:31.48:138,0,31	1/1:9,3:3:6.02:84,6,0	1/1:17,7:15:2.73:41,3,0	0/1:14,7:14:64.48:107,0,64	1/1:2,7:6:2.82:42,3,0	1/1:4,10:10:3.01:42,3,0	0/0:10,1:10:3.01:0,3,46	0/1:43,15:51:99:239,0,474	0/1:10,10:17:87.45:335,0,87	0/1:4,15:14:14.61:252,0,15	1/1:2,3:5:8.07:122,8,0
chr10	13278250	.	T	TGATA	2817.27	PASS	AB=0.903;AC=30;AF=0.577;AN=52;BaseQRankSum=-3.598;DP=565;FS=0.000;HRun=0;HaplotypeScore=136.6753;InbreedingCoeff=-0.5059;MQ=28.64;MQ0=99;MQRankSum=0.620;QD=5.74;ReadPosRankSum=-0.679;VQSLOD=2.3363;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:26,4:24:18.76:99,0,19	0/0:2,0:1:2.22:0,2,7	./.	./.	0/1:18,1:12:16.98:17,0,44	0/1:14,4:13:18.04:80,0,18	0/1:21,0:14:7.27:7,0,95	0/1:58,0:15:61.51:72,0,62	1/1:12,7:12:23.86:421,24,0	0/1:32,2:24:99:188,0,312	0/1:16,0:8:25.93:26,0,42	0/1:9,4:10:35.13:205,0,35	1/1:7,0:6:9.02:138,9,0	0/1:13,2:15:4.24:83,0,4	1/1:17,4:14:2.23:225,2,0	0/1:13,3:13:61:272,0,61	0/1:11,3:11:55.08:151,0,55	0/1:8,1:7:49.88:50,0,88	0/1:11,0:2:19.96:39,0,20	0/0:43,0:28:13.94:0,14,249	0/1:39,0:27:77.42:77,0,107	1/1:13,0:8:0.33:1,0,0	1/1:15,3:11:3.01:50,3,0	1/1:7,2:8:3.01:74,3,0	0/1:23,1:20:39.60:134,0,40	0/1:30,0:24:99:131,0,192	0/1:12,7:11:65.75:330,0,66	0/1:6,1:7:85.50:93,0,86
chr10	13278369	.	TGATA	T	119.22	PASS	AB=0.904;AC=4;AF=0.071;AN=56;BaseQRankSum=3.296;DP=729;FS=15.898;HRun=0;HaplotypeScore=200.3810;InbreedingCoeff=0.2629;MQ=30.72;MQ0=88;MQRankSum=-0.919;QD=2.06;ReadPosRankSum=-1.318;VQSLOD=1.2328;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:13,5:15:13.48:75,0,13	0/0:10,0:6:8.98:0,9,139	0/0:17,0:1:3.01:0,3,67	0/0:12,0:2:6.02:0,6,144	0/0:37,0:25:12.04:0,12,286	0/0:27,0:19:20.88:0,21,293	0/0:11,0:7:5.85:0,6,126	0/0:53,0:16:42.14:0,42,927	0/0:32,0:27:54.04:0,54,1014	0/0:48,0:39:75.15:0,75,1516	0/0:35,0:26:24.03:0,24,526	0/0:22,0:18:21.03:0,21,418	0/0:33,0:27:35.12:0,35,651	0/0:27,0:24:17.88:0,18,303	0/0:41,0:37:30.05:0,30,527	0/0:30,0:23:17.10:0,17,677	0/0:17,0:14:21.02:0,21,371	0/0:18,0:15:21.07:0,21,475	0/0:6,0:2:3.48:0,3,12	0/0:11,0:8:3.01:0,3,57	0/0:13,0:8:3.01:0,3,53	0/0:30,0:22:11.99:0,12,255	0/0:31,0:20:14.60:0,15,286	0/0:32,0:30:29.97:0,30,609	1/1:12,6:19:13.12:140,13,0	0/0:50,0:42:66.77:0,67,1607	0/0:28,0:25:35.73:0,36,518	0/1:14,0:13:11.91:12,0,584
chr10	13278408	.	CAGAT	C	2128.79	PASS	AB=0.920;AC=39;AF=0.813;AN=48;BaseQRankSum=0.117;DP=498;FS=1.293;HRun=0;HaplotypeScore=138.4820;InbreedingCoeff=0.2772;MQ=31.02;MQ0=57;MQRankSum=-0.462;QD=5.35;ReadPosRankSum=3.223;VQSLOD=2.3599;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:23,3:19:15.61:16,0,63	1/1:8,0:5:2.96:19,3,0	0/0:29,0:8:23.80:0,24,243	0/0:18,0:2:5.93:0,6,40	./.	1/1:9,1:8:6.01:83,6,0	./.	1/1:27,0:14:20.94:167,21,0	1/1:22,0:19:9.03:153,9,0	1/1:22,0:20:18.05:281,18,0	1/1:17,2:14:3.01:51,3,0	0/1:10,0:8:0:0,0,0	1/1:25,0:18:8.38:100,8,0	0/1:14,1:13:0.21:0,0,0	1/1:17,0:15:2.99:51,3,0	1/1:14,1:11:6.02:82,6,0	1/1:12,0:10:3.01:51,3,0	1/1:12,0:9:8.98:105,9,0	./.	1/1:11,0:8:2.97:20,3,0	./.	1/1:24,0:19:0.47:1,0,0	0/1:24,1:17:2.66:47,0,3	1/1:17,0:15:6.02:102,6,0	0/1:19,6:22:17.05:17,0,113	1/1:29,0:24:38.57:504,39,0	1/1:12,2:12:14.84:254,15,0	1/1:11,0:10:9.03:152,9,0
chr10	13278410	.	GATA	G	1061.93	PASS	AB=0.788;AC=25;AF=0.463;AN=54;BaseQRankSum=3.058;DP=478;FS=10.824;HRun=0;HaplotypeScore=133.1923;InbreedingCoeff=-0.3469;MQ=30.66;MQ0=57;MQRankSum=-2.043;QD=2.98;ReadPosRankSum=2.430;VQSLOD=1.7594;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:19:4.04:4,0,84	0/0:6,1:4:2.97:0,3,20	0/0:31,0:8:24.08:0,24,502	0/0:18,0:2:6.02:0,6,116	0/1:18,6:16:8.09:31,0,8	1/1:6,3:8:8.19:54,8,0	1/1:7,1:5:2.80:20,3,0	0/1:28,1:14:15.20:15,0,33	0/1:9,9:15:71.86:119,0,72	0/1:15,6:18:99:125,0,111	0/1:11,4:11:22.40:27,0,22	0/1:6,3:7:3.14:65,0,3	0/1:19,6:18:24.80:25,0,132	0/1:10,4:12:13.26:13,0,13	1/1:12,5:15:11.70:94,12,0	0/1:8,6:9:28.89:29,0,100	0/1:11,1:10:16.58:17,0,37	0/1:9,3:9:49.16:49,0,57	./.	1/1:8,2:7:0.71:2,1,0	0/0:14,0:10:2.80:0,3,18	0/0:17,6:19:2.53:0,3,14	0/1:21,4:17:5.27:42,0,5	0/1:10,7:15:42.38:68,0,42	0/0:24,0:22:7.83:0,8,194	0/1:15,12:23:61.34:198,0,61	0/1:6,7:11:20.17:139,0,20	0/1:7,4:10:69.30:76,0,69
chr10	13278424	.	TAG	T	141.77	PASS	AB=0.969;AC=25;AF=0.500;AN=50;BaseQRankSum=1.120;DP=351;FS=2.069;HRun=0;HaplotypeScore=119.6678;InbreedingCoeff=0.2196;MQ=28.99;MQ0=43;MQRankSum=0.538;QD=0.69;ReadPosRankSum=2.099;VQSLOD=1.9955;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:19:12.73:13,0,91	0/1:5,0:3:2.21:20,0,2	0/0:24,0:9:3.14:0,3,333	0/0:16,0:4:8.23:0,8,107	0/1:12,0:4:0:0,0,0	0/1:7,0:6:0.43:0,0,9	1/1:8,0:5:1.55:4,2,0	0/0:23,0:12:23.26:0,23,179	0/1:16,1:15:7.09:7,0,48	1/1:11,1:9:11.74:55,12,0	1/1:9,0:8:1.71:5,2,0	./.	0/0:11,0:7:4.35:0,4,27	0/0:10,0:8:0.47:0,0,1	1/1:13,0:12:1.81:5,2,0	0/0:13,0:7:2.59:0,3,32	1/1:6,2:6:2.52:7,3,0	0/0:7,0:4:5.53:0,6,73	./.	0/0:9,0:7:1.54:0,2,4	./.	0/0:12,1:9:2.94:0,3,8	1/1:12,0:8:2.70:7,3,0	1/1:10,0:9:3.63:10,4,0	0/1:19,0:22:33.85:34,0,99	0/1:23,1:18:27.70:48,0,28	1/1:14,0:10:14.42:47,14,0	1/1:6,0:6:5.45:15,5,0
chr10	13278434	.	TGATAGATGATA	T	1113.38	PASS	AB=0.914;AC=20;AF=0.385;AN=52;BaseQRankSum=4.675;DP=359;FS=4.772;HRun=0;HaplotypeScore=132.6695;InbreedingCoeff=-0.0691;MQ=25.61;MQ0=41;MQRankSum=-1.864;QD=5.08;ReadPosRankSum=-0.955;VQSLOD=1.7806;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:20:32.98:33,0,141	1/1:3,1:4:6.91:155,7,0	0/0:24,0:10:21.96:0,22,615	0/0:15,0:4:9.03:0,9,263	1/1:11,0:5:0.47:2,0,0	0/0:6,1:4:5.64:0,6,89	1/1:5,3:4:3.01:82,3,0	0/1:29,0:16:9.65:10,0,968	0/1:14,2:14:13.91:14,0,136	0/1:11,2:9:99:218,0,164	0/0:9,0:8:2.22:0,2,51	0/0:6,1:4:0.47:0,0,1	0/1:11,1:9:91.03:91,0,193	1/1:8,2:7:0.86:1,1,0	0/0:7,1:8:3.30:0,3,53	0/0:11,0:5:10.27:0,10,146	0/0:7,0:6:6.26:0,6,50	0/1:7,0:5:4.30:4,0,107	./.	0/1:6,1:5:0:0,0,0	./.	1/1:10,0:11:1.42:3,1,0	0/0:14,1:11:0.82:0,1,37	0/0:11,0:10:6.02:0,6,80	0/1:20,0:23:17.95:18,0,117	0/1:16,4:14:99:425,0,140	0/1:11,3:10:99:187,0,161	0/0:5,0:5:1.33:0,1,66
chr10	13278438	.	AGAT	A	434.54	PASS	AB=0.984;AC=17;AF=0.327;AN=52;BaseQRankSum=5.171;DP=368;FS=18.614;HRun=0;HaplotypeScore=123.1320;InbreedingCoeff=-0.0531;MQ=25.42;MQ0=47;MQRankSum=-2.124;QD=2.01;ReadPosRankSum=2.946;VQSLOD=1.1630;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:22,6:20:12.96:84,0,13	1/1:5,0:4:5.91:71,6,0	0/0:23,0:9:21.96:0,22,346	0/0:16,0:4:8.99:0,9,162	0/1:12,0:6:0.04:0,0,0	0/0:8,0:5:3.38:0,3,59	1/1:8,0:4:3.01:46,3,0	0/1:33,0:16:9.66:10,0,554	0/1:16,0:14:32.93:33,0,98	0/1:14,0:9:40.02:40,0,142	0/0:10,0:8:1.71:0,2,39	0/0:7,0:4:0.47:0,0,1	0/1:15,0:11:13.07:13,0,114	0/0:10,0:7:0.47:0,0,1	0/0:9,0:8:3.31:0,3,43	0/1:11,0:5:20.60:21,0,73	0/0:7,0:6:6.76:0,7,50	0/1:9,0:6:31.02:49,0,31	./.	0/1:7,0:5:0.17:0,0,0	./.	0/0:14,0:11:1.54:0,2,3	0/0:15,0:10:1.75:0,2,39	0/0:12,0:11:6.02:0,6,80	1/1:22,0:22:12.27:73,12,0	0/1:21,0:14:91.14:91,0,137	0/1:15,0:11:37.53:38,0,141	0/0:5,0:5:5.99:0,6,62
chr10	13278441	.	TGATA	T	699.17	PASS	AB=0.788;AC=26;AF=0.542;AN=48;BaseQRankSum=0.620;DP=368;FS=18.173;HRun=0;HaplotypeScore=130.5170;InbreedingCoeff=0.2792;MQ=25.70;MQ0=43;MQRankSum=-0.917;QD=3.14;ReadPosRankSum=1.787;VQSLOD=1.5715;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:15,8:19:3.84:22,4,0	1/1:3,0:4:3.72:32,4,0	0/0:23,0:9:7.27:0,7,129	0/0:13,0:4:6.02:0,6,116	0/1:7,1:6:0:0,0,0	1/1:4,3:5:4.52:24,5,0	1/1:6,1:4:2.80:13,3,0	0/0:32,0:16:15.05:0,15,370	0/1:12,3:15:15.64:24,0,16	1/1:11,3:10:8.48:166,8,0	0/0:6,0:8:0:0,0,0	0/1:6,2:5:0.01:0,0,0	0/1:11,5:13:39.11:39,0,77	0/1:5,4:7:0:0,0,0	0/1:7,1:8:0:0,0,0	0/0:5,2:6:2.83:0,3,12	0/0:3,1:5:1.20:0,1,3	1/1:5,3:6:3.16:95,3,0	./.	0/1:2,4:5:0:0,0,0	./.	1/1:7,4:11:0.94:2,1,0	0/0:9,3:10:1.29:0,1,7	./.	0/1:12,7:22:2.05:93,0,2	1/1:14,6:15:1.15:190,1,0	1/1:12,3:13:8.82:117,9,0	./.
chr10	13278480	.	T	TAGA	434.03	PASS	AB=0.831;AC=10;AF=0.192;AN=52;BaseQRankSum=5.096;DP=443;FS=8.970;HRun=0;HaplotypeScore=161.6252;InbreedingCoeff=-0.1548;MQ=25.81;MQ0=54;MQRankSum=-4.200;QD=2.60;ReadPosRankSum=0.528;VQSLOD=2.0639;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:15:5.81:0,6,111	0/0:3,0:4:11.99:0,12,152	0/0:25,0:2:6.02:0,6,111	0/0:24,0:1:3.01:0,3,47	0/0:8,1:8:0.27:0,0,1	0/1:10,2:7:53.48:65,0,53	0/0:14,0:9:18.06:0,18,334	0/0:32,0:11:27.09:0,27,458	0/1:13,5:16:44.23:44,0,419	0/1:26,1:20:22.73:23,0,795	0/0:10,0:10:4.67:0,5,110	0/0:6,3:7:0.48:0,0,2	0/1:15,5:18:55.18:55,0,237	0/1:9,3:10:21.94:22,0,101	0/0:9,3:13:8.60:0,9,147	0/0:6,4:9:13.63:0,14,179	0/0:9,0:8:7.74:0,8,93	0/1:5,2:7:58.80:59,0,197	./.	0/0:11,0:9:3.01:0,3,46	./.	0/0:17,0:19:6.98:0,7,115	1/1:17,0:12:0.31:1,0,0	0/0:10,0:9:2.90:0,3,56	0/0:21,0:23:16.21:0,16,264	0/1:24,5:20:99:232,0,777	0/1:13,3:15:58.26:58,0,438	0/0:3,0:4:9.03:0,9,159
chr10	13278484	.	A	AGAT	467.08	PASS	AB=0.845;AC=10;AF=0.192;AN=52;BaseQRankSum=4.637;DP=448;FS=10.146;HRun=0;HaplotypeScore=159.5827;InbreedingCoeff=-0.1547;MQ=25.38;MQ0=61;MQRankSum=-4.372;QD=2.76;ReadPosRankSum=0.065;VQSLOD=1.7284;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:13:5.92:0,6,96	0/0:4,0:4:11.73:0,12,132	0/0:30,0:2:6.02:0,6,82	0/0:25,0:1:3.01:0,3,50	0/0:7,2:8:0.47:0,0,1	0/1:9,2:6:47.44:60,0,47	0/0:15,0:9:18.06:0,18,295	0/0:31,0:9:21.07:0,21,350	0/1:15,5:16:38.29:38,0,376	0/1:26,1:19:13.79:14,0,758	0/0:13,0:10:4.89:0,5,98	0/0:7,3:8:0.44:0,0,2	0/1:16,5:18:52.29:52,0,182	0/1:10,3:10:17.93:18,0,90	0/0:11,3:13:9.50:0,9,137	0/0:6,4:9:13.63:0,14,162	0/0:10,0:8:7.74:0,8,85	0/1:7,2:8:54.66:55,0,165	./.	0/0:12,0:9:3.01:0,3,50	./.	0/0:23,0:19:6.98:0,7,103	1/1:20,0:12:0.13:0,0,0	0/0:10,0:9:3:0,3,50	0/0:23,0:21:19.68:0,20,211	0/1:25,5:21:99:212,0,683	0/1:15,3:15:99:141,0,363	0/0:5,0:4:9.03:0,9,141
chr10	13278511	.	CAGAT	C	36.30	PASS	AB=0.851;AC=6;AF=0.120;AN=50;BaseQRankSum=1.648;DP=463;FS=1.216;HRun=0;HaplotypeScore=179.8973;InbreedingCoeff=0.0446;MQ=25.29;MQ0=83;MQRankSum=-1.593;QD=0.45;ReadPosRankSum=0.035;VQSLOD=2.5280;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:10,5:9:31.93:48,0,32	0/0:4,0:4:3.48:0,3,58	./.	0/0:25,0:1:3.01:0,3,46	./.	0/0:10,0:5:6.69:0,7,50	0/0:10,0:5:15.05:0,15,354	0/0:23,0:12:10.57:0,11,226	0/0:29,0:24:21.67:0,22,542	0/1:27,1:20:1.58:2,0,887	0/0:14,0:10:6.02:0,6,121	0/0:18,0:15:8.78:0,9,107	0/0:20,0:17:11.40:0,11,210	0/0:17,0:15:14.48:0,14,167	0/0:16,0:14:6.70:0,7,85	0/0:14,0:12:18.99:0,19,219	1/1:7,0:6:0.47:1,0,0	0/0:8,0:7:9.29:0,9,154	./.	0/0:15,0:12:3.01:0,3,79	0/1:11,0:5:0:0,0,0	0/0:23,1:17:5.49:0,5,119	0/0:15,1:9:2.87:0,3,15	0/0:12,0:10:2.84:0,3,17	0/1:11,9:18:73.11:73,0,152	0/0:28,0:20:52.62:0,53,935	0/0:25,0:20:29.50:0,29,604	0/0:7,0:5:11.40:0,11,186
chr10	13278519	.	TGATA	T	433.21	PASS	AB=0.924;AC=18;AF=0.391;AN=46;BaseQRankSum=1.946;DP=433;FS=5.942;HRun=0;HaplotypeScore=173.6025;InbreedingCoeff=-0.1999;MQ=25.03;MQ0=83;MQRankSum=-1.784;QD=1.78;ReadPosRankSum=-1.985;VQSLOD=1.9598;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:8:8.12:0,8,72	0/0:3,0:2:3.90:0,4,77	./.	./.	./.	0/0:10,1:6:2.74:0,3,12	./.	0/0:21,0:8:11.99:0,12,167	0/1:27,1:23:60.19:60,0,96	0/1:22,5:18:99:135,0,214	0/0:6,3:6:6.02:0,6,80	0/1:19,0:16:1.09:1,0,92	0/1:16,2:16:68.42:78,0,68	0/1:17,0:16:23.15:23,0,108	1/1:13,2:13:2.61:20,3,0	0/1:13,1:13:3.28:3,0,122	0/1:4,1:5:7.19:7,0,28	0/1:8,0:7:19.46:19,0,22	./.	1/1:19,0:14:1.25:3,1,0	0/1:9,0:4:0:0,0,0	0/0:16,3:13:5.99:0,6,63	0/0:14,3:10:2.74:0,3,12	1/1:10,1:9:3.01:51,3,0	0/0:17,0:15:11.74:0,12,136	0/1:19,5:18:99:109,0,355	0/1:19,3:19:10.99:11,0,463	0/1:6,1:5:39.16:39,0,143
chr10	13278535	.	AGACC	A	1017.60	PASS	AB=0.933;AC=28;AF=0.583;AN=48;BaseQRankSum=1.740;DP=381;FS=1.769;HRun=0;HaplotypeScore=141.5990;InbreedingCoeff=-0.2355;MQ=24.13;MQ0=81;MQRankSum=-0.766;QD=3.75;ReadPosRankSum=-0.694;VQSLOD=2.5580;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:6:5.85:0,6,85	0/1:3,0:2:9.31:9,0,39	./.	./.	0/1:11,0:7:0:0,0,0	1/1:8,1:5:5.06:58,5,0	./.	0/0:24,0:9:0.06:0,0,243	0/1:18,5:18:73.41:153,0,73	0/1:22,0:14:55.66:56,0,92	1/1:8,0:4:0.71:2,1,0	0/1:12,5:14:20.73:116,0,21	0/1:10,1:8:26.78:27,0,72	0/1:11,4:15:73.45:148,0,73	1/1:14,0:12:1.62:33,2,0	0/1:13,1:13:59.83:103,0,60	0/1:5,0:5:22.11:22,0,28	1/1:3,2:5:14.99:177,15,0	./.	1/1:22,0:16:3.01:32,3,0	0/0:8,0:5:0.47:0,0,1	1/1:18,0:12:2.86:25,3,0	1/1:14,0:8:2.97:20,3,0	1/1:11,0:9:2.49:18,2,0	0/0:19,0:14:9.67:0,10,146	0/1:21,0:14:99:112,0,113	0/1:21,1:18:27.45:27,0,176	0/1:6,0:4:11.02:11,0,36
chr10	13278538	.	C	CAGA	68.71	PASS	AB=0.938;AC=5;AF=0.114;AN=44;BaseQRankSum=0.366;DP=369;FS=22.283;HRun=0;HaplotypeScore=141.1431;InbreedingCoeff=0.0168;MQ=23.84;MQ0=76;MQRankSum=-0.426;QD=0.93;ReadPosRankSum=-0.042;VQSLOD=1.0751;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:6:5.84:0,6,70	0/0:3,0:2:5.98:0,6,48	./.	./.	./.	0/0:9,0:5:6.01:0,6,63	./.	0/0:25,0:9:20.89:0,21,313	0/1:21,1:18:45.16:45,0,84	0/0:19,0:11:22.25:0,22,254	0/0:7,1:4:5.48:0,5,45	0/1:16,1:14:30.48:30,0,101	0/0:9,0:6:7.57:0,8,96	0/0:13,1:14:14.72:0,15,162	0/0:12,0:10:4.41:0,4,34	0/0:13,0:12:13.79:0,14,136	0/0:5,0:5:8.15:0,8,80	0/0:5,0:5:10.36:0,10,90	./.	0/0:22,1:17:3.01:0,3,34	./.	0/0:17,0:12:6.19:0,6,53	1/1:14,0:8:2.97:20,3,0	0/0:12,0:10:2.99:0,3,42	0/0:18,0:13:8.85:0,9,109	0/0:21,0:14:15.43:0,15,325	0/1:19,2:17:77.33:77,0,298	0/0:5,1:4:8.82:0,9,54
chr10	13278546	.	CAGAT	C	250.68	PASS	AB=0.977;AC=15;AF=0.326;AN=46;BaseQRankSum=5.165;DP=362;FS=2.181;HRun=0;HaplotypeScore=124.2950;InbreedingCoeff=-0.0906;MQ=23.14;MQ0=75;MQRankSum=-0.715;QD=1.62;ReadPosRankSum=4.126;VQSLOD=1.6143;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:6:5.95:0,6,77	0/1:3,0:2:38.19:42,0,38	./.	./.	./.	0/1:7,0:5:13.92:16,0,14	./.	0/0:24,0:9:18.03:0,18,339	0/1:19,0:16:27.66:28,0,140	0/1:22,1:11:42.91:43,0,205	0/0:9,0:5:0:0,0,0	0/1:16,0:14:29.01:29,0,49	0/1:9,0:6:14.14:14,0,94	0/1:10,0:11:49.44:71,0,49	0/0:11,0:9:0.68:0,1,2	0/1:10,0:9:35.08:35,0,54	0/1:5,0:5:5.86:6,0,15	1/1:5,0:5:10.63:56,11,0	./.	1/1:22,0:16:3.01:34,3,0	0/1:11,0:6:0:0,0,0	0/1:12,2:10:0.11:0,0,0	0/0:12,1:8:0:0,0,0	0/0:10,0:9:2.72:0,3,15	0/0:18,0:13:10.09:0,10,101	0/0:22,0:14:0.80:0,1,278	0/0:20,0:16:23.98:0,24,406	0/0:5,0:3:5.98:0,6,47
chr10	13278551	.	AGAT	A	273.34	PASS	AB=0.905;AC=17;AF=0.370;AN=46;BaseQRankSum=3.650;DP=333;FS=6.213;HRun=0;HaplotypeScore=109.0008;InbreedingCoeff=-0.1943;MQ=22.64;MQ0=68;MQRankSum=0.707;QD=1.87;ReadPosRankSum=1.255;VQSLOD=1.4269;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:9,1:5:10.58:11,0,35	1/1:3,0:2:3.01:34,3,0	./.	./.	./.	0/1:5,1:5:36.13:36,0,74	./.	0/0:24,0:8:18.06:0,18,299	0/0:14,4:15:17.41:0,17,225	0/1:23,0:11:44.63:45,0,129	1/1:7,0:3:0.47:1,0,0	0/1:10,3:11:30.27:30,0,130	0/1:4,1:3:36.08:36,0,88	0/1:9,2:11:75.18:75,0,81	0/0:8,1:8:3.40:0,3,42	0/1:7,2:8:36.46:36,0,62	0/1:5,0:5:34.62:35,0,35	0/1:4,0:4:32.63:33,0,68	0/0:5,0:2:6.02:0,6,75	0/0:21,1:16:2.37:0,2,8	0/1:11,1:7:0:0,0,0	0/1:12,1:8:0:0,0,0	./.	0/1:8,1:8:0.24:0,0,0	0/0:16,0:11:7.53:0,8,40	0/1:15,1:8:24.17:24,0,256	0/0:18,1:15:28.23:0,28,434	0/0:4,0:3:2.80:0,3,7
chr10	13278563	.	GATAGACCGACAGAC	G	1689.78	PASS	AB=0.889;AC=22;AF=0.500;AN=44;BaseQRankSum=3.412;DP=304;FS=18.112;HRun=0;HaplotypeScore=105.1599;InbreedingCoeff=-0.1326;MQ=21.27;MQ0=69;MQRankSum=-1.611;QD=9.88;ReadPosRankSum=3.843;VQSLOD=0.5893;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:9,0:4:2.69:14,3,0	1/1:2,0:1:3:28,3,0	./.	./.	./.	0/1:7,1:6:0.26:169,0,0	./.	0/0:20,0:5:15.05:0,15,528	0/1:15,4:16:93.40:150,0,93	0/1:19,0:8:53.86:100,0,54	./.	0/1:10,3:10:99:188,0,103	0/1:7,1:6:99:141,0,117	0/1:7,2:9:5.46:335,0,5	1/1:6,1:5:3.35:32,3,0	0/1:7,2:7:12.40:166,0,12	1/1:3,0:3:1.05:20,1,0	1/1:4,0:3:9.03:198,9,0	0/0:7,0:2:6.02:0,6,330	0/0:20,1:16:6.02:0,6,215	0/0:12,0:7:0.89:0,1,2	0/1:8,1:5:0.13:0,0,0	0/1:9,2:6:0:0,0,0	0/0:6,0:6:1.90:0,2,3	0/1:11,0:7:9.57:10,0,52	0/1:13,1:7:99:180,0,308	0/1:15,1:13:80.53:81,0,257	./.
chr10	13278565	.	TAGACCGACAGAC	T	1815.44	PASS	AB=0.957;AC=23;AF=0.523;AN=44;BaseQRankSum=2.668;DP=310;FS=10.881;HRun=0;HaplotypeScore=101.9477;InbreedingCoeff=0.0819;MQ=21.17;MQ0=72;MQRankSum=1.784;QD=11.21;ReadPosRankSum=4.146;VQSLOD=0.5514;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:8,0:3:0.04:0,0,0	1/1:1,1:1:3.01:79,3,0	./.	./.	./.	1/1:8,0:6:0.94:161,1,0	./.	0/0:22,0:5:15.01:0,15,437	0/1:18,0:15:29.05:179,0,29	0/1:18,3:10:99:228,0,140	./.	0/1:13,0:10:99:158,0,125	0/1:8,0:6:93.94:117,0,94	1/1:9,0:9:11.66:251,12,0	1/1:7,0:5:3.35:47,3,0	1/1:9,0:7:6.49:127,6,0	1/1:3,0:3:5.13:58,5,0	1/1:4,0:3:9.03:173,9,0	0/0:7,0:2:6.02:0,6,291	0/0:21,0:16:6.02:0,6,186	0/0:12,0:7:0.89:0,1,2	0/1:7,2:5:0.13:0,0,0	0/1:10,1:6:0:0,0,0	0/0:7,0:7:1.93:0,2,3	0/0:10,0:6:4.26:0,4,59	0/1:15,0:8:99:196,0,329	0/1:17,0:14:99:166,0,188	./.
chr10	13278567	.	GACCGACAGAC	G	3227.04	PASS	AB=0.790;AC=21;AF=0.477;AN=44;BaseQRankSum=0.494;DP=303;FS=17.864;HRun=0;HaplotypeScore=93.2382;InbreedingCoeff=0.0637;MQ=21.31;MQ0=68;MQRankSum=1.354;QD=20.95;ReadPosRankSum=4.551;VQSLOD=0.8717;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:7,1:3:0:0,0,0	1/1:2,0:1:3.01:47,3,0	./.	./.	./.	0/1:4,4:6:4.31:290,0,4	./.	0/0:21,1:5:15.01:0,15,438	0/1:10,8:15:33.94:393,0,34	0/1:16,4:9:99:244,0,187	./.	0/1:7,6:10:99:320,0,107	0/1:6,2:6:99:193,0,114	1/1:4,5:9:11.76:403,12,0	1/1:4,3:5:2.88:102,3,0	1/1:4,5:7:6.02:202,6,0	1/1:4,0:4:8.45:89,8,0	1/1:2,2:3:9.03:303,9,0	0/0:6,0:2:6.02:0,6,297	0/0:21,0:16:6.02:0,6,199	0/0:11,1:7:0.89:0,1,2	0/1:9,0:5:0.13:0,0,0	0/1:11,0:6:0:0,0,0	0/0:7,0:7:1.94:0,2,3	0/0:10,0:6:4.26:0,4,59	0/1:10,5:8:99:381,0,404	0/1:9,8:14:99:389,0,249	./.
chr10	13278633	.	GAT	G	270.84	PASS	AB=0.919;AC=24;AF=0.522;AN=46;BaseQRankSum=1.773;DP=215;FS=23.154;HRun=0;HaplotypeScore=58.5370;InbreedingCoeff=0.0852;MQ=22.89;MQ0=36;MQRankSum=-0.934;QD=1.95;ReadPosRankSum=0.041;VQSLOD=0.0591;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/1:1,0:1:0:0,0,0	0/0:3,0:1:3.01:0,3,43	./.	0/0:12,0:10:0:0,0,0	0/1:10,1:6:29.47:29,0,76	./.	0/0:13,0:1:3.01:0,3,43	0/1:8,1:7:1.02:33,0,1	0/1:11,3:5:76.11:76,0,113	0/1:11,0:6:0:0,0,0	1/1:3,3:4:5.81:33,6,0	1/1:9,0:6:0.46:1,0,0	1/1:5,1:3:3.01:46,3,0	1/1:6,1:5:2.82:46,3,0	1/1:4,1:3:3.01:46,3,0	0/0:4,0:4:2.99:0,3,24	0/0:4,0:2:2.98:0,3,22	0/0:8,0:2:3:0,3,26	./.	./.	1/1:13,0:8:0.46:1,0,0	0/1:9,0:7:0:0,0,0	0/0:8,0:7:3.01:0,3,43	1/1:8,0:7:2.83:8,3,0	0/1:15,2:8:23.84:24,0,257	0/1:7,2:9:26.60:27,0,226	1/1:4,0:2:1.42:14,1,0
chr10	13278697	.	TGATA	T	175.23	PASS	AB=0.947;AC=12;AF=0.231;AN=52;BaseQRankSum=4.930;DP=549;FS=10.874;HRun=0;HaplotypeScore=129.5119;InbreedingCoeff=0.0938;MQ=26.07;MQ0=92;MQRankSum=-3.797;QD=1.09;ReadPosRankSum=-2.831;VQSLOD=0.8889;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,3:9:1.39:4,1,0	0/1:6,1:5:0:1,0,0	./.	./.	0/0:28,1:23:9.01:0,9,223	0/1:11,1:7:72.79:73,0,98	0/0:8,1:7:5.23:0,5,138	0/0:30,0:4:0:0,0,0	0/0:19,0:12:4.54:0,5,70	0/0:40,1:28:7.85:0,8,1363	0/0:20,1:16:6.01:0,6,148	0/1:23,0:14:14.92:15,0,260	0/1:17,1:12:53.80:54,0,256	0/1:11,1:8:0:0,0,0	0/1:9,0:5:0:0,0,0	0/0:13,0:5:5.25:0,5,109	0/0:15,0:11:15.03:0,15,330	0/0:13,0:7:0.66:0,1,136	0/0:5,0:6:6.32:0,6,161	0/0:23,4:25:2.69:0,3,52	1/1:6,3:8:3.01:51,3,0	0/0:33,0:26:1.21:0,1,72	0/0:30,1:20:21.06:0,21,459	0/0:17,1:15:11.96:0,12,262	0/1:24,2:24:88.34:88,0,157	0/1:28,1:19:0.38:0,0,1025	0/0:12,1:5:5.72:0,6,98	0/0:20,0:12:30.84:0,31,738
chr10	13278701	.	A	AGAT	254.67	PASS	AB=0.951;AC=10;AF=0.185;AN=54;BaseQRankSum=2.434;DP=551;FS=1.095;HRun=0;HaplotypeScore=129.5417;InbreedingCoeff=0.1340;MQ=26.06;MQ0=95;MQRankSum=-2.230;QD=1.45;ReadPosRankSum=-0.761;VQSLOD=2.4641;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:10,1:9:0.47:0,0,1	0/1:7,0:5:0.04:0,0,0	0/0:21,0:1:3.01:0,3,41	./.	0/0:28,0:22:9.03:0,9,150	0/0:13,0:8:15.02:0,15,186	0/0:9,0:7:6.02:0,6,100	0/0:33,0:5:11.86:0,12,130	0/0:18,1:12:7.27:0,7,104	0/1:39,2:28:4.73:5,0,999	0/0:19,1:15:6.02:0,6,100	0/1:20,2:14:99:114,0,215	0/0:17,0:12:18.32:0,18,230	0/1:12,0:8:0:0,0,0	0/1:8,1:5:0:0,0,0	0/0:11,2:5:6.02:0,6,101	0/0:15,0:11:15.05:0,15,250	0/0:13,0:7:3.22:0,3,108	0/1:7,0:6:3.73:52,0,4	1/1:31,0:25:2.42:26,2,0	0/0:10,0:9:2.84:0,3,22	0/0:34,0:26:3.90:0,4,53	0/0:33,0:21:20.46:0,20,349	0/0:19,0:15:10:0,10,198	0/1:30,2:24:99:121,0,107	0/0:29,0:19:54.17:0,54,874	0/1:12,1:5:44.14:51,0,44	0/0:20,0:12:36.12:0,36,607
chr10	13278704	.	TAGATA	T	65.20	PASS	AB=0.961;AC=8;AF=0.148;AN=54;BaseQRankSum=1.987;DP=551;FS=0.000;HRun=0;HaplotypeScore=133.5504;InbreedingCoeff=0.2820;MQ=26.08;MQ0=96;MQRankSum=-1.105;QD=0.80;ReadPosRankSum=-1.189;VQSLOD=2.3665;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:12,0:10:0.07:2,0,0	0/1:7,0:5:0:0,0,0	0/0:23,0:3:9.03:0,9,133	./.	0/0:28,0:22:9.03:0,9,300	0/0:13,0:8:0.63:0,1,184	0/0:7,0:6:6.02:0,6,200	0/0:35,0:7:17.98:0,18,277	0/0:19,0:12:6.06:0,6,168	0/0:41,0:28:74.06:0,74,2124	0/0:20,0:15:6.02:0,6,200	0/0:23,0:14:19.58:0,20,410	0/0:17,0:12:14.96:0,15,408	0/1:12,0:8:0:0,0,0	0/1:9,0:5:0:0,0,0	0/0:13,0:5:7.57:0,8,188	0/0:15,0:11:15.05:0,15,480	0/0:13,0:7:11.26:0,11,243	0/0:8,0:6:12.04:0,12,269	0/0:31,0:24:1.99:0,2,78	1/1:10,0:9:0.89:3,1,0	0/0:34,0:26:2.66:0,3,100	0/0:32,0:20:20.42:0,20,682	0/0:18,0:14:11.87:0,12,398	0/1:26,6:24:99:137,0,183	0/0:28,0:18:51.17:0,51,1588	0/0:13,0:5:5.50:0,5,157	0/0:20,0:12:36.12:0,36,1092
chr10	13278814	.	C	CAGGT	545.35	PASS	AB=0.871;AC=16;AF=0.348;AN=46;BaseQRankSum=0.704;DP=289;FS=6.643;HRun=0;HaplotypeScore=79.7966;InbreedingCoeff=-0.1472;MQ=29.14;MQ0=35;MQRankSum=-2.483;QD=3.56;ReadPosRankSum=-2.355;VQSLOD=0.3273;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/1:3,2:4:28.80:29,0,101	0/0:19,0:7:13.29:0,13,220	0/0:22,0:10:26.45:0,26,447	0/0:13,0:10:0:0,0,0	0/1:7,1:6:29.06:29,0,89	./.	0/0:12,0:1:2.99:0,3,24	0/1:8,2:5:53.69:74,0,54	0/1:15,0:8:30.18:30,0,227	0/0:13,1:7:5.99:0,6,118	0/1:12,4:11:99:102,0,128	1/1:4,3:4:3.01:69,3,0	1/1:6,1:7:2.99:40,3,0	0/1:10,2:8:0.19:0,0,0	0/1:13,1:8:63.83:64,0,267	0/0:7,0:6:17.80:0,18,287	0/0:6,0:3:4.26:0,4,62	0/1:6,2:8:66.38:66,0,170	0/0:13,4:9:2.67:0,3,48	./.	0/0:11,0:9:4.06:0,4,61	0/1:21,1:14:0:0,0,0	./.	0/1:4,0:3:0:0,0,0	0/1:9,2:7:99:137,0,274	0/1:11,3:10:27.82:28,0,110	./.
chr10	13278836	.	AGAT	A	798.48	PASS	AB=0.982;AC=16;AF=0.333;AN=48;BaseQRankSum=-2.112;DP=309;FS=22.338;HRun=0;HaplotypeScore=81.9959;InbreedingCoeff=-0.1956;MQ=28.97;MQ0=31;MQRankSum=0.730;QD=5.02;ReadPosRankSum=-1.544;VQSLOD=0.2752;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/1:4,0:3:23.28:37,0,23	0/0:22,0:3:9.03:0,9,145	0/0:19,0:10:17.42:0,17,246	0/0:16,0:12:2.77:0,3,67	0/1:9,0:7:33.52:36,0,34	0/0:3,0:2:0:0,0,0	0/0:25,0:12:1.83:0,2,349	0/1:10,0:5:12.90:82,0,13	0/1:14,0:10:99:146,0,124	0/1:14,0:9:57.48:82,0,57	0/1:13,0:8:63.52:64,0,85	0/0:7,0:4:2.47:0,2,67	0/1:8,0:8:0:0,0,0	0/1:11,0:7:0.01:0,0,0	0/0:12,0:7:3.01:0,3,67	1/1:6,0:5:8.83:137,9,0	1/1:5,0:2:3.01:46,3,0	0/1:10,1:9:27.62:28,0,114	0/1:23,4:19:44.99:45,0,61	./.	0/0:9,0:7:2.99:0,3,66	./.	./.	0/0:3,0:2:0:0,0,0	0/1:15,0:11:99:138,0,164	0/1:12,0:8:12.82:82,0,13	0/0:1,0:1:3.01:0,3,44
chr10	13278887	.	GATAGACCGAC	G	182.90	PASS	AB=0.978;AC=5;AF=0.093;AN=54;BaseQRankSum=3.865;DP=350;FS=9.031;HRun=0;HaplotypeScore=119.3996;InbreedingCoeff=0.2015;MQ=28.16;MQ0=61;MQRankSum=-1.906;QD=3.27;ReadPosRankSum=2.986;VQSLOD=1.4809;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:4,0:1:0:0,0,0	0/0:2,0:2:3.01:0,3,97	0/0:25,0:3:9.03:0,9,185	0/0:31,0:5:15.05:0,15,468	0/0:17,0:12:11.79:0,12,286	1/1:6,0:4:2.57:16,3,0	0/0:7,0:6:5.88:0,6,126	./.	0/0:9,0:8:12.13:0,12,207	0/1:27,2:21:99:142,0,1285	0/0:19,1:17:8.53:0,9,214	0/0:11,0:7:5.93:0,6,141	0/0:3,0:3:0.89:0,1,2	0/0:9,0:9:5.86:0,6,235	0/0:7,0:6:2.26:0,2,84	0/0:9,0:4:9.03:0,9,200	0/0:6,0:4:9.03:0,9,262	0/0:4,0:2:2.96:0,3,19	0/0:9,0:5:12.04:0,12,360	0/0:38,0:30:20.94:0,21,811	0/0:12,0:7:0.29:0,0,1	0/0:17,2:18:12.30:0,12,361	0/0:13,0:11:6.49:0,6,137	0/0:12,0:7:3.01:0,3,57	0/0:3,0:1:0.47:0,0,1	0/1:17,0:15:99:121,0,844	0/0:9,0:8:21.07:0,21,782	0/0:8,0:7:18.06:0,18,453
chr10	13278889	.	TAGACCGACAGAC	T	300.10	PASS	AB=0.946;AC=5;AF=0.093;AN=54;BaseQRankSum=2.702;DP=363;FS=11.550;HRun=0;HaplotypeScore=128.6700;InbreedingCoeff=0.1829;MQ=28.86;MQ0=63;MQRankSum=-1.993;QD=5.00;ReadPosRankSum=3.201;VQSLOD=1.6768;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:4,0:1:0:0,0,0	0/0:2,0:2:3.01:0,3,73	0/0:25,0:3:6.01:0,6,128	0/0:31,0:5:3.05:0,3,354	0/0:17,0:12:9.23:0,9,319	1/1:5,0:4:2.86:42,3,0	0/0:7,0:7:6:0,6,162	./.	0/0:10,0:8:12.13:0,12,232	0/1:29,1:22:95.10:95,0,1564	0/0:20,1:18:8.74:0,9,223	0/0:11,0:7:5.92:0,6,158	0/0:3,0:3:0.89:0,1,2	0/0:9,0:9:6.02:0,6,250	0/0:7,0:6:2.80:0,3,96	0/0:9,0:4:9.03:0,9,270	0/0:5,1:4:9:0,9,239	0/0:4,0:2:5.90:0,6,37	0/0:10,0:5:12.04:0,12,312	0/0:39,0:31:24.01:0,24,839	0/0:12,0:7:0.27:0,0,1	0/0:19,0:18:12.87:0,13,346	0/0:13,0:11:6.49:0,6,175	0/0:11,1:7:3.01:0,3,90	0/0:3,0:1:0.89:0,1,2	0/1:17,3:18:99:260,0,972	0/0:11,0:10:21.07:0,21,859	0/0:8,0:7:18.06:0,18,417
chr10	13278893	.	C	CAGA	1189.23	PASS	AB=0.831;AC=23;AF=0.442;AN=52;BaseQRankSum=-1.052;DP=379;FS=2.873;HRun=0;HaplotypeScore=113.6435;InbreedingCoeff=-0.0349;MQ=29.17;MQ0=64;MQRankSum=3.449;QD=4.87;ReadPosRankSum=3.093;VQSLOD=2.3894;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:1:0:0,0,0	1/1:2,0:1:3.01:37,3,0	0/0:26,0:3:6.02:0,6,89	0/0:31,0:5:8.18:0,8,164	1/1:15,3:13:6.94:77,7,0	0/0:5,1:4:2.62:0,3,19	0/0:8,0:7:1.90:0,2,19	0/0:14,0:3:2.96:0,3,23	1/1:6,5:9:0.94:3,1,0	0/1:23,6:22:99:314,0,285	0/1:14,6:18:37.75:43,0,38	1/1:11,1:8:3.78:47,4,0	0/1:2,1:3:0.08:0,0,0	1/1:6,3:9:6.02:96,6,0	1/1:6,2:7:0.06:1,0,0	0/0:9,0:5:0.81:0,1,9	0/0:5,1:4:5.87:0,6,24	0/1:6,0:4:0:0,0,0	0/1:9,2:5:26.92:37,0,27	0/1:29,10:31:52.81:253,0,53	0/1:15,0:10:0:0,0,0	0/1:15,5:18:16.04:83,0,16	0/0:10,5:12:1.73:0,2,9	./.	./.	0/1:20,1:19:35.07:35,0,202	0/1:6,6:11:12.36:253,0,12	0/1:5,3:7:30.06:37,0,30
chr10	13278894	.	C	CA	452.76	PASS	AB=0.876;AC=20;AF=0.357;AN=56;BaseQRankSum=0.633;DP=387;FS=3.730;HRun=0;HaplotypeScore=113.5311;InbreedingCoeff=-0.0771;MQ=29.47;MQ0=65;MQRankSum=-0.836;QD=1.83;ReadPosRankSum=3.608;VQSLOD=2.4306;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:1:0:0,0,0	1/1:2,0:1:2.74:12,3,0	0/0:26,0:2:6.02:0,6,73	0/0:31,0:5:15.03:0,15,174	0/1:16,3:14:14.50:15,0,32	0/0:5,1:4:2.05:0,2,7	0/0:8,0:7:4.68:0,5,26	0/1:14,0:3:9.01:14,0,9	0/0:6,5:9:10.10:0,10,39	0/1:25,6:24:99:114,0,204	0/1:14,6:18:17.30:17,0,24	0/1:11,1:8:8.05:14,0,8	0/0:2,1:3:1.25:0,1,3	1/1:6,3:9:11.91:89,12,0	0/0:6,2:7:2.64:0,3,14	0/1:10,0:6:13.67:14,0,37	0/0:5,1:4:8.83:0,9,57	1/1:6,0:4:5.96:43,6,0	0/1:9,2:5:10.02:10,0,62	0/1:29,10:31:32.41:96,0,32	0/1:15,0:10:0:0,0,0	0/1:15,5:18:14.15:34,0,14	0/0:11,5:12:5.12:0,5,33	0/1:14,0:9:8.08:24,0,8	0/1:3,0:1:0:0,0,0	0/0:20,1:19:7.90:0,8,197	0/1:8,6:13:11.33:97,0,11	0/1:5,3:7:2.43:2,0,66
chr10	13278993	.	TGATAGATAGATAGATA	T	1255.88	PASS	AB=0.954;AC=28;AF=0.824;AN=34;BaseQRankSum=-0.496;DP=440;FS=3.594;HRun=0;HaplotypeScore=141.3193;InbreedingCoeff=-0.2398;MQ=44.92;MQ0=30;MQRankSum=2.779;QD=4.14;ReadPosRankSum=1.465;VQSLOD=2.6578;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:23:1.70:3,2,0	./.	./.	./.	./.	./.	./.	0/1:30,0:16:62.67:63,0,791	./.	0/1:18,3:10:93.85:94,0,221	0/1:15,2:13:83.79:84,0,123	1/1:8,0:8:2.98:21,3,0	0/1:8,0:8:2.52:101,0,3	1/1:9,1:10:2.92:58,3,0	1/1:10,0:8:2.12:105,2,0	1/1:11,1:10:8.78:161,9,0	1/1:10,0:11:3.48:52,3,0	./.	0/1:9,0:6:30.90:106,0,31	0/1:40,0:35:6.72:104,0,7	./.	./.	1/1:22,0:12:6.02:124,6,0	./.	1/1:29,0:26:2.66:11,3,0	1/1:18,0:15:9.03:233,9,0	1/1:11,1:11:0.47:1,0,0	1/1:12,1:9:3.01:36,3,0
chr10	13279030	.	GACCGAC	G	90.34	PASS	AB=0.875;AC=9;AF=0.205;AN=44;BaseQRankSum=3.051;DP=224;FS=14.949;HRun=0;HaplotypeScore=66.6059;InbreedingCoeff=0.2687;MQ=23.85;MQ0=45;MQRankSum=0.601;QD=2.58;ReadPosRankSum=-0.120;VQSLOD=0.0857;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:15,1:14:11.64:0,12,82	1/1:3,0:3:3.01:63,3,0	0/0:16,0:1:3.01:0,3,83	0/0:18,0:4:8.79:0,9,225	./.	0/1:4,0:4:10.44:10,0,45	./.	0/0:36,0:19:50.87:0,51,976	./.	0/1:5,1:3:63.87:64,0,181	0/0:8,0:6:3.01:0,3,38	./.	0/0:2,0:2:2.68:0,3,11	0/0:4,0:4:0.47:0,0,1	1/1:6,0:5:0.46:1,0,0	1/1:6,0:4:4.87:54,5,0	0/0:2,0:2:0.18:0,0,1	./.	0/0:6,0:3:9.03:0,9,252	0/0:18,3:15:6.89:0,7,144	0/0:14,1:14:24.48:0,24,784	0/1:7,3:6:0:0,0,0	0/0:4,0:2:2.90:0,3,16	0/0:8,0:5:0:0,0,0	0/0:12,0:8:0.89:0,1,2	0/0:4,0:2:6.02:0,6,94	./.	0/0:1,0:1:3.01:0,3,32
chr10	13279118	.	TA	T	107.76	PASS	AB=0.774;AC=4;AF=0.071;AN=56;BaseQRankSum=5.919;DP=586;FS=0.000;HRun=1;HaplotypeScore=184.1980;InbreedingCoeff=-0.0939;MQ=42.88;MQ0=15;MQRankSum=-4.354;QD=2.76;ReadPosRankSum=0.026;VQSLOD=-0.5798;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,2:22:21.92:0,22,317	0/1:8,4:12:93.73:94,0,126	0/0:27,0:14:34.55:0,35,586	0/0:23,1:10:25.58:0,26,346	0/0:27,8:34:29.96:0,30,479	0/0:17,3:20:23.82:0,24,383	0/0:10,2:11:24.08:0,24,379	0/0:44,0:42:99:0,123,1860	0/1:11,5:16:59.87:60,0,350	0/0:29,2:28:7.09:0,7,1124	0/0:20,6:22:30.10:0,30,480	0/0:11,1:12:14.71:0,15,239	0/0:14,3:17:20.58:0,21,512	0/0:12,5:15:23.96:0,24,383	0/0:13,8:18:6.75:0,7,362	0/0:20,1:20:48.15:0,48,761	0/0:9,1:9:14.76:0,15,239	0/1:4,2:6:38.08:38,0,167	0/0:20,0:19:50.99:0,51,745	0/0:38,0:30:45.15:0,45,714	0/0:28,0:23:21.07:0,21,314	0/0:15,7:21:29.89:0,30,479	0/0:11,0:9:9.03:0,9,144	0/0:10,0:8:6.02:0,6,96	0/0:15,4:15:18.06:0,18,284	0/0:34,0:30:87.30:0,87,1389	0/0:21,4:23:14.07:0,14,726	0/1:4,1:5:24.95:25,0,132
chr10	13279123	.	AGGTAGAGATAGAT	A	1368.43	PASS	AB=0.826;AC=10;AF=0.179;AN=56;BaseQRankSum=3.662;DP=553;FS=3.133;HRun=0;HaplotypeScore=240.4954;InbreedingCoeff=-0.2364;MQ=43.58;MQ0=14;MQRankSum=-3.917;QD=7.96;ReadPosRankSum=1.911;VQSLOD=2.5938;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:22:29.21:29,0,305	0/1:7,4:11:99:335,0,301	0/0:23,0:13:36.07:0,36,834	0/0:20,0:10:26.78:0,27,643	0/0:26,8:33:30.07:0,30,901	0/0:16,0:16:29.97:0,30,865	0/0:12,0:11:24.04:0,24,696	0/0:37,0:37:99:0,108,2452	0/1:11,5:16:99:299,0,700	0/1:29,2:28:99:158,0,1808	0/0:20,6:22:30.06:0,30,657	0/0:11,1:12:14.74:0,15,487	0/1:14,3:17:56.99:57,0,910	0/1:13,4:15:38.11:38,0,733	0/1:13,8:18:99:148,0,784	0/0:20,1:20:47.45:0,47,957	0/0:9,1:9:11.75:0,12,424	0/1:4,2:6:99:229,0,304	0/0:19,0:18:48.11:0,48,1401	0/0:32,0:24:39.02:0,39,1712	0/0:24,0:19:10.90:0,11,170	0/0:15,7:20:26.41:0,26,777	0/0:10,0:8:8.60:0,9,233	0/0:10,0:8:6.02:0,6,162	0/0:18,2:16:5.85:0,6,607	0/0:32,0:29:84.15:0,84,2144	0/1:21,4:23:99:111,0,1186	0/1:4,1:5:99:109,0,194
chr10	13279156	.	AGATAGATAGATAGACCGACAGACAGATAGGT	A	882.30	PASS	AB=0.963;AC=11;AF=0.204;AN=54;BaseQRankSum=1.490;DP=454;FS=0.000;HRun=0;HaplotypeScore=292.0135;InbreedingCoeff=-0.1270;MQ=35.31;MQ0=25;MQRankSum=-1.766;QD=5.55;ReadPosRankSum=-0.394;VQSLOD=1.8840;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:26:7.68:8,0,1028	0/1:8,0:8:6.16:6,0,237	./.	0/0:12,0:3:3.48:0,3,44	0/0:25,0:24:9.92:0,10,665	0/0:10,0:9:6.36:0,6,138	0/0:9,0:8:9.03:0,9,581	0/0:37,0:23:2.08:0,2,729	0/1:15,0:15:13.53:14,0,441	0/0:29,0:27:23.53:0,24,1467	0/0:16,0:15:3.01:0,3,34	0/0:11,0:11:0.14:0,0,1	0/0:14,0:14:10.39:0,10,211	1/1:11,0:10:0.28:2,0,0	0/1:17,0:16:9.07:9,0,48	0/0:17,0:17:14.11:0,14,686	0/1:11,0:10:49.76:50,0,273	0/0:5,0:4:4.71:0,5,80	0/1:7,7:13:99:738,0,119	0/1:32,0:28:99:149,0,958	0/0:11,0:10:12.04:0,12,869	0/0:21,0:19:8.18:0,8,85	0/1:9,0:8:0:0,0,1	0/0:12,0:10:2.84:0,3,210	0/0:20,0:17:28.86:0,29,1652	0/0:28,0:24:18.75:0,19,1205	0/1:15,0:14:27.22:27,0,224	0/0:5,0:4:3.01:0,3,110
chr10	13279175	.	C	CAGAG	399.62	PASS	AB=0.959;AC=13;AF=0.250;AN=52;BaseQRankSum=4.687;DP=395;FS=0.895;HRun=0;HaplotypeScore=173.2560;InbreedingCoeff=0.0216;MQ=30.51;MQ0=37;MQRankSum=-2.504;QD=2.28;ReadPosRankSum=-3.558;VQSLOD=1.9714;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:28.16:0,28,309	0/0:7,0:7:10.56:0,11,144	./.	./.	0/0:17,0:16:9.03:0,9,165	0/0:10,0:9:2.55:0,3,31	0/0:10,0:9:9.03:0,9,145	0/0:33,0:11:24.08:0,24,437	0/1:16,0:16:22.33:22,0,144	0/1:28,1:24:83.20:83,0,429	0/0:10,0:10:3.01:0,3,32	0/1:11,0:11:0.57:1,0,1	0/1:11,2:13:25.60:29,0,26	1/1:12,1:13:2.90:17,3,0	0/1:15,0:15:0.07:0,0,0	0/1:12,1:13:41.88:42,0,200	0/0:6,0:6:5.91:0,6,80	0/1:4,1:4:2.77:98,0,3	0/0:12,0:11:6.02:0,6,155	0/0:28,0:25:15.44:0,15,247	0/0:13,0:12:30.08:0,30,521	0/1:16,0:15:0.07:0,0,0	0/1:7,0:6:0.05:0,0,1	0/0:9,0:8:3.01:0,3,45	0/0:19,0:17:26.67:0,27,441	0/1:20,1:17:99:107,0,365	0/1:16,0:15:99:123,0,112	0/0:1,1:2:3:0,3,41
chr10	13279187	.	T	TAGA	1307.36	PASS	AB=0.815;AC=13;AF=0.260;AN=50;BaseQRankSum=3.024;DP=360;FS=0.000;HRun=0;HaplotypeScore=146.5116;InbreedingCoeff=-0.2053;MQ=31.62;MQ0=44;MQRankSum=-3.089;QD=9.68;ReadPosRankSum=-3.623;VQSLOD=2.7400;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:13.50:0,13,238	0/0:5,0:5:3.48:0,3,56	./.	./.	0/1:17,1:16:33.28:33,0,151	0/0:6,1:6:5.90:0,6,72	0/1:7,1:7:7.36:7,0,159	0/0:28,0:7:21.07:0,21,375	0/1:9,3:12:58.78:59,0,172	0/1:11,4:16:99:367,0,336	./.	0/1:5,2:8:0:0,0,0	0/0:9,4:15:2.59:0,3,73	1/1:6,7:13:3.90:75,4,0	0/0:11,2:13:2.91:0,3,19	0/1:5,3:10:99:128,0,203	0/0:3,0:4:1.22:0,1,83	0/1:2,2:4:30.25:132,0,30	0/1:11,0:10:10.82:11,0,169	0/0:24,0:23:22.45:0,22,322	0/0:20,0:19:35.84:0,36,636	0/0:12,0:13:5.90:0,6,37	0/0:4,1:4:0.45:0,0,1	0/0:8,0:10:2.96:0,3,56	0/0:19,0:17:23.87:0,24,423	0/1:11,5:14:99:319,0,353	0/1:6,4:10:37.76:239,0,38	0/1:2,1:3:30.86:68,0,31
chr10	13279191	.	A	AGAT	1900.85	PASS	AB=0.862;AC=17;AF=0.340;AN=50;BaseQRankSum=-2.023;DP=398;FS=16.815;HRun=0;HaplotypeScore=159.6500;InbreedingCoeff=-0.0881;MQ=31.66;MQ0=45;MQRankSum=-2.620;QD=9.23;ReadPosRankSum=-4.036;VQSLOD=1.3812;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:14.47:0,14,249	0/0:6,0:6:6.01:0,6,64	./.	./.	0/1:17,1:16:99:113,0,141	0/0:6,1:6:5.92:0,6,67	0/1:7,1:7:49.08:49,0,138	0/1:34,0:9:66.80:125,0,67	0/1:10,3:13:52.91:53,0,151	0/1:19,4:19:99:389,0,301	./.	0/1:6,2:8:0:0,0,0	0/1:12,4:16:87.17:96,0,87	1/1:8,7:15:3.48:69,3,0	0/0:10,3:13:2.96:0,3,50	0/1:12,3:15:99:157,0,172	0/0:5,0:5:8.98:0,9,115	1/1:3,2:5:9.03:200,9,0	0/0:11,0:10:23.88:0,24,266	0/0:28,0:24:23.98:0,24,368	0/0:22,0:20:35.83:0,36,600	0/1:16,0:16:16.84:17,0,91	0/0:3,1:4:0.46:0,0,1	0/0:10,1:10:2.80:0,3,50	0/0:20,0:18:20.86:0,21,330	0/1:15,4:16:99:334,0,303	0/1:8,5:12:28.91:377,0,29	1/1:2,1:3:3.01:68,3,0
chr10	13279238	.	TAGATAG	T	98.07	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=2.216;DP=583;FS=6.775;HRun=0;HaplotypeScore=171.5874;InbreedingCoeff=0.6626;MQ=38.08;MQ0=35;MQRankSum=-1.554;QD=3.27;ReadPosRankSum=-2.827;VQSLOD=1.7618;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:12,1:13:5.71:82,6,0	0/0:6,0:6:15.01:0,15,451	0/0:19,0:3:8.70:0,9,127	0/0:19,0:5:15.05:0,15,274	0/0:20,0:16:18.06:0,18,481	0/0:19,0:16:11.81:0,12,375	0/0:14,0:13:21.07:0,21,586	0/0:65,0:48:99:0,117,2777	0/0:15,0:13:14.39:0,14,424	0/0:31,0:27:75.26:0,75,1911	0/0:18,0:17:15.52:0,16,408	0/0:10,0:10:5.38:0,5,261	0/0:19,0:18:24.49:0,24,700	0/0:19,0:17:9.50:0,10,251	0/0:27,0:24:24.89:0,25,757	0/0:21,0:20:22.47:0,22,701	0/0:10,0:10:26.68:0,27,596	0/0:8,0:8:18.06:0,18,436	0/0:19,0:17:42.12:0,42,1170	0/0:40,0:37:35.83:0,36,867	0/0:35,0:33:50.99:0,51,1389	0/0:27,0:25:39.08:0,39,1131	0/0:10,0:8:8.59:0,9,239	0/0:15,0:13:9.03:0,9,292	1/1:12,5:15:6.23:116,6,0	0/0:35,0:30:74.78:0,75,2138	0/0:25,0:23:45.89:0,46,1348	0/0:5,0:5:9.03:0,9,221
chr10	13279245	.	A	AT	43.04	PASS	AB=0.722;AC=5;AF=0.089;AN=56;BaseQRankSum=2.185;DP=579;FS=0.000;HRun=0;HaplotypeScore=139.3411;InbreedingCoeff=0.4503;MQ=37.93;MQ0=27;MQRankSum=-2.120;QD=1.20;ReadPosRankSum=-3.559;VQSLOD=1.0026;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:5,4:9:1.25:44,1,0	0/0:7,1:8:15.05:0,15,209	0/0:12,0:3:8.70:0,9,95	0/0:14,0:5:15.05:0,15,208	0/0:16,3:15:18.06:0,18,251	0/0:20,0:16:12.04:0,12,168	0/0:14,0:13:21.07:0,21,292	0/0:58,0:45:99:0,126,1754	0/0:12,4:14:14.82:0,15,199	0/0:32,2:29:81.26:0,81,1101	0/0:19,1:19:15.25:0,15,205	0/1:8,5:13:34.15:34,0,114	0/0:15,4:18:24.46:0,24,330	0/0:21,0:19:10.27:0,10,128	0/0:24,4:24:24.08:0,24,335	0/0:19,2:20:24.55:0,25,336	0/0:9,1:10:21.34:0,21,346	0/0:10,0:10:3.68:0,4,195	0/0:23,0:18:40.06:0,40,598	0/0:39,0:36:38.01:0,38,505	0/0:32,0:30:52.10:0,52,714	0/0:29,3:29:39.06:0,39,542	0/0:7,2:7:9.03:0,9,126	0/0:14,1:13:9.03:0,9,126	1/1:13,1:12:5.98:71,6,0	0/0:34,2:30:37.98:0,38,1041	0/0:22,5:25:20.42:0,20,593	0/0:5,0:5:9.02:0,9,109
chr10	13279275	.	TA	T	147.90	PASS	AB=0.660;AC=2;AF=0.038;AN=52;BaseQRankSum=2.369;DP=616;FS=4.868;HRun=1;HaplotypeScore=147.5815;InbreedingCoeff=0.1606;MQ=41.92;MQ0=15;MQRankSum=0.723;QD=3.79;ReadPosRankSum=-1.009;VQSLOD=-0.1136;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:7,14:21:3.45:161,0,3	0/0:8,0:8:15.05:0,15,234	./.	./.	0/0:26,0:19:24.08:0,24,363	0/0:26,0:22:29.86:0,30,406	0/0:11,0:11:9.02:0,9,118	0/0:54,0:38:99:0,104,1474	0/0:23,0:21:32.86:0,33,505	0/0:27,0:21:54.18:0,54,849	0/0:25,0:24:23.57:0,24,372	0/0:17,0:16:23.96:0,24,364	0/0:22,0:21:45.62:0,46,684	0/0:16,0:15:6.02:0,6,92	0/0:29,0:25:33.11:0,33,502	0/0:26,0:25:51.16:0,51,762	0/0:15,0:15:38.88:0,39,535	0/0:12,0:12:9.50:0,10,129	0/0:24,0:17:45.08:0,45,637	0/0:38,0:37:50.02:0,50,689	0/0:29,0:28:39.47:0,39,606	0/0:38,0:34:42.78:0,43,665	0/0:15,0:12:20.88:0,21,312	0/0:16,0:15:21.07:0,21,325	0/1:11,7:15:37.96:75,0,38	0/0:40,0:35:93.89:0,94,1435	0/0:31,0:30:58.04:0,58,856	0/0:8,0:8:6.02:0,6,93
chr10	13279303	.	T	TAGATAGAC	8395.93	PASS	AB=0.840;AC=42;AF=0.778;AN=54;BaseQRankSum=-2.963;DP=700;FS=4.846;HRun=0;HaplotypeScore=178.0792;InbreedingCoeff=0.4918;MQ=43.95;MQ0=13;MQRankSum=1.737;QD=13.83;ReadPosRankSum=1.453;VQSLOD=3.2419;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:20.11:0,20,174	1/1:8,0:8:15:242,15,0	0/0:15,0:2:2.98:0,3,21	0/0:10,0:4:4.97:0,5,62	0/1:23,1:17:10.14:88,0,10	1/1:24,0:20:26.89:212,27,0	1/1:14,0:14:14.66:110,15,0	1/1:49,0:39:65.85:538,66,0	1/1:24,1:23:32.75:393,33,0	1/1:35,0:29:43.16:711,43,0	1/1:33,1:33:38.33:318,38,0	1/1:25,0:24:32.93:442,33,0	1/1:22,0:21:47.72:394,48,0	./.	1/1:25,1:23:32.57:392,33,0	1/1:24,1:24:41.99:429,42,0	1/1:20,0:20:35.86:445,36,0	0/1:1,15:20:7.67:126,0,8	0/1:21,0:21:90.78:267,0,91	1/1:34,0:36:25.97:336,26,0	0/1:25,0:27:5.46:188,0,5	1/1:35,2:32:39.14:431,39,0	1/1:21,0:16:23.91:189,24,0	1/1:16,1:17:29.93:241,30,0	0/0:21,0:17:17.94:0,18,150	1/1:45,1:41:99:1115,105,0	1/1:36,0:34:61.12:698,61,0	1/1:0,11:13:3.01:92,3,0
chr10	13279495	.	GAGGAGGAGCAGAGGGAGGAGGAGCAGAGGT	G	5506.26	PASS	AB=0.981;AC=49;AF=0.875;AN=56;BaseQRankSum=-6.986;DP=560;FS=0.849;HRun=0;HaplotypeScore=309.0898;InbreedingCoeff=0.0864;MQ=56.97;MQ0=48;MQRankSum=-3.054;QD=10.49;ReadPosRankSum=1.986;VQSLOD=3.2854;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:20:99:156,0,769	1/1:8,0:7:9:100,9,0	0/0:35,0:4:2.52:0,3,30	0/1:47,0:12:1.82:5,0,2	1/1:19,0:18:14.98:151,15,0	1/1:16,0:15:18.91:223,19,0	1/1:13,0:13:11.91:92,12,0	1/1:16,0:13:6.23:15,6,0	1/1:20,0:20:39.01:488,39,0	1/1:17,0:15:29.44:372,29,0	1/1:9,0:9:8.98:75,9,0	1/1:21,0:20:23.88:241,24,0	1/1:18,0:18:36.04:603,36,0	1/1:12,0:12:20.84:234,21,0	1/1:10,0:10:18.01:202,18,0	1/1:16,0:16:27.03:404,27,0	1/1:23,0:23:13.83:443,14,0	1/1:7,0:7:6:51,6,0	0/1:24,0:11:43.26:43,0,195	1/1:28,0:24:20.25:151,20,0	0/1:64,0:42:99:127,0,461	1/1:10,12:21:5.93:125,6,0	1/1:9,0:8:6:52,6,0	1/1:20,0:19:35.81:403,36,0	0/1:16,0:13:30.97:31,0,215	1/1:23,0:22:27.74:262,28,0	1/1:12,0:11:17.78:291,18,0	1/1:7,0:5:12.02:166,12,0
chr10	13279836	.	TGACA	T	11805.61	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-5.132;DP=784;FS=5.044;HRun=0;HaplotypeScore=162.8419;InbreedingCoeff=0.8996;MQ=66.16;MQ0=3;MQRankSum=-0.644;QD=18.89;ReadPosRankSum=2.088;VQSLOD=4.5788;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:54:8.69:81,9,0	1/1:3,7:10:18.06:283,18,0	0/0:21,0:14:3.01:0,3,71	0/0:30,0:26:15.01:0,15,248	1/1:11,14:25:39.13:614,39,0	1/1:7,13:20:39.13:614,39,0	1/1:19,12:31:21.07:331,21,0	1/1:27,5:32:17.20:218,17,0	1/1:19,15:34:42.14:662,42,0	1/1:14,9:23:27.07:402,27,0	1/1:5,8:13:15.05:236,15,0	1/1:8,20:28:57.19:898,57,0	1/1:9,15:24:29.92:473,30,0	1/1:9,19:28:45.15:709,45,0	1/1:13,19:32:48.16:756,48,0	1/1:11,18:29:51.17:803,51,0	1/1:20,23:43:66.19:1013,66,0	1/1:12,17:29:30.10:472,30,0	0/0:18,0:22:27.09:0,27,500	0/0:9,0:18:25.15:0,25,395	0/0:32,0:68:99:0,105,1785	1/1:9,14:23:23.76:378,24,0	1/1:13,9:22:15.05:236,15,0	1/1:15,28:43:75.26:1181,75,0	1/1:7,0:19:6.01:56,6,0	1/1:13,12:25:36.12:566,36,0	1/1:13,17:30:38.92:614,39,0	1/1:2,5:7:15.01:209,15,0
chr10	13281331	.	AACACACACACACACACACAC	A	12648.85	PASS	AB=0.827;AC=39;AF=0.722;AN=54;BaseQRankSum=4.150;DP=487;FS=31.619;HRun=0;HaplotypeScore=254.4919;InbreedingCoeff=0.5845;MQ=67.62;MQ0=4;MQRankSum=-5.989;QD=38.45;ReadPosRankSum=0.188;VQSLOD=2.6954;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:21.28:0,21,899	1/1:8,5:13:18.06:755,18,0	./.	0/0:34,0:24:6.02:0,6,95	1/1:15,8:24:3.96:520,4,0	1/1:11,0:12:6.81:364,7,0	1/1:18,0:18:14.27:182,14,0	0/1:19,0:19:23.40:145,0,23	0/1:12,8:20:99:1203,0,110	1/1:11,6:17:39.10:1231,39,0	1/1:14,3:17:26.84:458,27,0	1/1:8,5:14:23.99:815,24,0	1/1:8,3:11:17.98:533,18,0	1/1:4,7:11:9.08:619,9,0	1/1:16,8:24:38.97:1128,39,0	1/1:11,4:15:23.93:490,24,0	1/1:11,2:13:23.86:494,24,0	1/1:4,2:6:8.24:327,8,0	0/0:14,0:14:12.04:0,12,536	0/0:9,0:14:12.04:0,12,599	0/0:22,0:22:21:0,21,872	1/1:17,6:25:14.84:829,15,0	1/1:3,5:8:3.01:56,3,0	1/1:13,3:16:12.04:331,12,0	0/0:18,0:22:36.12:0,36,1282	0/1:16,5:23:99:1251,0,108	1/1:11,3:15:14.58:816,15,0	1/1:8,0:8:8.96:102,9,0
chr10	13281422	.	ATATTTT	A	13553.80	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=11.627;DP=459;FS=8.261;HRun=0;HaplotypeScore=127.5155;InbreedingCoeff=0.9174;MQ=56.06;MQ0=0;MQRankSum=-12.091;QD=41.20;ReadPosRankSum=1.321;VQSLOD=4.5326;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:63.22:0,63,2059	1/1:2,19:21:48.16:1036,48,0	0/0:16,0:16:24.03:0,24,559	0/0:11,0:11:18.06:0,18,453	1/1:8,28:36:57.20:1230,57,0	1/1:1,10:11:30.10:647,30,0	1/1:5,4:9:12.04:259,12,0	1/1:9,19:28:57.07:984,57,0	1/1:3,9:12:27.09:583,27,0	1/1:7,19:26:57.20:1229,57,0	1/1:2,13:15:27.09:582,27,0	1/1:5,13:18:27.09:582,27,0	1/1:3,9:12:27.09:583,27,0	1/1:2,11:13:24.08:518,24,0	1/1:4,14:18:36.12:777,36,0	1/1:3,11:14:27.09:552,27,0	1/1:4,5:9:15.05:324,15,0	1/1:2,1:3:1.24:62,1,0	0/0:24,0:24:61.42:0,61,1869	0/0:23,0:23:60.20:0,60,1875	0/0:14,0:14:39.13:0,39,1286	1/1:5,15:20:42.14:906,42,0	1/1:5,11:16:33.11:711,33,0	1/1:6,7:13:18.06:388,18,0	0/0:20,0:20:60.21:0,60,1923	1/1:5,11:16:33.11:695,33,0	1/1:2,16:18:39.13:841,39,0	1/1:0,1:1:3.01:65,3,0
chr10	13281548	.	ATCTTGGAGCTCTTTGAGCTCTT	A	25119.53	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=13.780;DP=424;FS=32.228;HRun=0;HaplotypeScore=257.8394;InbreedingCoeff=0.9098;MQ=82.11;MQ0=0;MQRankSum=-13.667;QD=95.15;ReadPosRankSum=5.057;VQSLOD=2.9787;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,105,10167	1/1:0,6:6:9.03:409,9,0	0/0:19,0:19:37.12:0,37,1790	0/0:19,0:19:57.20:0,57,2563	1/1:2,13:15:18.06:939,18,0	1/1:0,7:7:15.05:928,15,0	1/1:1,16:17:21.07:1256,21,0	1/1:4,14:18:39.13:914,39,0	1/1:1,12:14:18.06:1093,18,0	1/1:0,19:19:48.16:2581,48,0	1/1:0,11:11:18.06:923,18,0	1/1:2,6:8:5.96:348,6,0	1/1:2,9:11:24.08:1485,24,0	1/1:0,17:17:33.11:2017,33,0	1/1:1,11:12:21.07:1277,21,0	1/1:0,7:7:12.04:740,12,0	1/1:0,11:11:12.04:743,12,0	1/1:0,6:6:12.04:743,12,0	0/0:11,0:11:33.11:0,33,3156	0/0:19,0:19:57.20:0,57,5301	0/0:34,0:34:99:0,102,8862	1/1:0,23:23:42.14:2590,42,0	1/1:0,17:17:36.12:2206,36,0	1/1:0,10:10:6.02:371,6,0	0/0:23,0:23:66.68:0,67,5937	1/1:1,11:12:33.11:1516,33,0	1/1:1,13:14:27.09:1671,27,0	1/1:1,8:9:6.02:371,6,0
chr10	13283778	.	C	CT	2964.32	PASS	AB=0.864;AC=33;AF=0.589;AN=56;BaseQRankSum=-2.562;DP=338;FS=1.413;HRun=6;HaplotypeScore=92.6098;InbreedingCoeff=0.6767;MQ=68.99;MQ0=5;MQRankSum=0.510;QD=16.02;ReadPosRankSum=-1.648;VQSLOD=3.2446;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:11.97:0,12,104	1/1:3,1:4:6.05:88,6,0	0/0:21,0:11:21.04:0,21,225	0/0:26,0:20:1.22:0,1,134	1/1:18,3:21:23.75:306,24,0	1/1:5,1:6:11.64:91,12,0	1/1:1,1:2:5.85:55,6,0	1/1:15,6:19:45.68:453,46,0	1/1:5,2:6:9.48:121,9,0	1/1:4,7:11:2.71:242,3,0	1/1:9,4:13:4.55:244,5,0	0/0:9,0:8:6.05:0,6,84	0/0:4,0:4:9.02:0,9,92	0/0:6,0:5:4.94:0,5,22	1/1:10,0:9:8.02:85,8,0	1/1:7,1:8:9.01:99,9,0	1/1:7,1:7:4.46:71,4,0	1/1:2,6:8:8.99:86,9,0	0/0:13,0:13:38.30:0,38,387	0/0:27,0:27:53.70:0,54,502	0/0:4,0:4:6.02:0,6,66	0/0:12,0:12:24.01:0,24,235	0/1:16,3:18:16.60:210,0,17	1/1:1,5:6:14.97:156,15,0	0/0:16,0:16:22.78:0,23,173	1/1:8,1:9:15.74:183,16,0	1/1:12,2:14:3.56:224,4,0	1/1:17,1:18:16.63:449,17,0
chr10	13283779	.	TTTTC	T	4129.02	PASS	AB=0.882;AC=28;AF=0.500;AN=56;BaseQRankSum=-3.315;DP=336;FS=3.122;HRun=0;HaplotypeScore=103.5801;InbreedingCoeff=-0.1677;MQ=68.57;MQ0=5;MQRankSum=1.000;QD=16.45;ReadPosRankSum=0.132;VQSLOD=3.4790;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:11,0:11:18.86:19,0,34	0/1:2,2:4:15.92:96,0,16	0/0:22,0:11:15.16:0,15,380	0/1:29,0:19:3.69:4,0,262	0/1:17,4:21:84.01:365,0,84	1/1:2,4:6:11.93:186,12,0	1/1:1,1:2:6.02:100,6,0	1/1:14,7:19:42.02:732,42,0	0/1:6,1:6:11.81:171,0,12	0/1:9,2:11:21.09:247,0,21	0/1:12,1:13:51.35:259,0,51	0/1:9,0:8:5.29:5,0,96	0/0:4,0:4:3.99:0,4,70	0/1:6,0:5:20.61:21,0,21	0/1:9,1:9:60.23:76,0,60	1/1:3,5:8:12.01:166,12,0	0/1:4,4:7:7:130,0,7	1/1:7,1:8:9.03:145,9,0	0/0:13,0:13:38.73:0,39,546	0/0:26,0:26:61.77:0,62,851	0/0:4,0:4:6.02:0,6,94	0/1:11,0:11:7.71:8,0,108	0/1:17,2:18:95.33:195,0,95	1/1:5,1:6:14.79:166,15,0	0/0:16,0:16:2.92:0,3,208	0/1:3,6:9:23.43:313,0,23	0/1:12,2:14:40.45:323,0,40	0/1:18,0:18:99:402,0,123
chr10	13283786	.	TTC	T	1150.09	PASS	AB=0.974;AC=40;AF=0.714;AN=56;BaseQRankSum=-1.021;DP=295;FS=9.362;HRun=0;HaplotypeScore=98.0805;InbreedingCoeff=0.4227;MQ=73.99;MQ0=5;MQRankSum=-2.675;QD=5.87;ReadPosRankSum=0.084;VQSLOD=2.1945;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,0:9:8.96:68,9,0	0/1:4,0:4:0.47:0,0,5	0/0:25,0:12:12.38:0,12,200	0/0:28,0:18:18.44:0,18,141	1/1:16,1:17:5.86:93,6,0	1/1:6,0:6:6.01:22,6,0	1/1:1,1:2:5.88:41,6,0	1/1:16,4:18:16.15:150,16,0	1/1:5,1:5:4.79:51,5,0	1/1:10,1:11:7.67:111,8,0	1/1:10,2:11:8.97:88,9,0	1/1:7,0:6:5.97:46,6,0	1/1:3,0:3:5.97:47,6,0	1/1:6,0:5:2.54:22,3,0	0/1:8,0:7:3.06:56,0,3	1/1:7,0:7:10.34:50,10,0	1/1:9,0:7:7.16:41,7,0	1/1:6,1:7:0.49:25,0,0	0/0:10,0:10:18.44:0,18,158	0/0:25,0:25:25.28:0,25,244	0/0:3,0:3:1.65:0,2,24	1/1:7,0:7:11.96:94,12,0	0/1:15,2:15:15.25:79,0,15	1/1:5,1:6:7.20:37,7,0	0/1:11,0:11:21.17:53,0,21	1/1:9,0:9:3.91:58,4,0	1/1:10,2:12:1.51:88,2,0	0/0:7,0:7:16:0,16,69
chr10	13283787	.	T	TTG	2262	PASS	AB=0.792;AC=16;AF=0.286;AN=56;BaseQRankSum=-5.936;DP=278;FS=27.553;HRun=0;HaplotypeScore=91.1344;InbreedingCoeff=-0.3813;MQ=73.91;MQ0=4;MQRankSum=-5.878;QD=13.96;ReadPosRankSum=2.043;VQSLOD=1.8225;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:7,0:8:13.94:14,0,31	0/1:3,1:4:43.55:50,0,44	0/0:22,0:12:10.87:0,11,279	0/0:28,0:18:21.67:0,22,176	0/1:10,6:16:47.61:334,0,48	0/0:7,0:7:11.98:0,12,108	0/0:2,0:2:5.92:0,6,39	0/0:18,0:16:31.07:0,31,269	0/1:5,1:5:31.75:61,0,32	0/1:9,1:10:35.14:35,0,106	0/1:7,4:10:38.89:191,0,39	0/1:6,1:6:33.37:51,0,33	0/0:2,0:3:5.94:0,6,42	0/0:6,0:5:5.92:0,6,40	0/1:3,4:7:25.93:223,0,26	0/0:7,0:7:11.52:0,12,79	0/1:7,2:7:65.93:91,0,66	0/0:5,0:5:8.98:0,9,76	0/1:9,1:10:34.10:34,0,256	0/1:17,6:23:99:304,0,441	0/0:3,0:3:5.61:0,6,46	0/0:5,0:5:8.89:0,9,62	0/1:10,4:13:99:212,0,101	0/0:6,0:6:14.78:0,15,106	0/1:6,5:11:37.18:277,0,37	0/1:7,2:9:96.30:96,0,141	0/1:6,2:8:93.70:100,0,94	0/1:1,6:7:0.02:342,0,0
chr10	13283793	.	TTTCTTCTTTTG	T	1062.36	PASS	AB=0.813;AC=6;AF=0.107;AN=56;BaseQRankSum=-4.868;DP=248;FS=8.963;HRun=0;HaplotypeScore=119.8257;InbreedingCoeff=0.1118;MQ=70.87;MQ0=3;MQRankSum=-1.507;QD=21.68;ReadPosRankSum=0.650;VQSLOD=2.0346;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:6:5.98:0,6,56	0/0:4,0:4:12.01:0,12,142	0/0:22,0:10:23.06:0,23,271	0/0:27,0:16:23.36:0,23,211	0/0:16,0:16:3.97:0,4,227	0/0:7,0:7:12.58:0,13,120	0/0:1,0:1:3.01:0,3,37	0/1:14,0:12:8.05:8,0,189	0/0:4,0:3:8.69:0,9,74	0/0:10,0:10:1:0,1,139	0/0:9,0:8:17.44:0,17,141	0/0:7,0:6:8.73:0,9,81	0/0:3,0:3:7.22:0,7,52	0/0:6,0:5:6.02:0,6,77	0/0:8,0:7:12.83:0,13,106	0/0:6,0:6:11.57:0,12,99	0/0:8,0:6:7.03:0,7,79	0/1:3,0:3:5.08:14,0,5	0/1:2,6:10:17.98:398,0,18	0/1:6,12:20:99:640,0,111	1/1:2,0:2:6.02:119,6,0	0/0:3,0:3:6.02:0,6,69	0/0:15,0:13:25.18:0,25,213	0/0:5,0:5:11.87:0,12,150	0/0:9,0:9:21.05:0,21,223	0/0:9,0:9:19.03:0,19,199	0/0:7,0:7:14.31:0,14,104	0/0:7,0:7:21.05:0,21,235
chr10	13283795	.	TCTTC	T	2179.86	PASS	AB=0.827;AC=39;AF=0.696;AN=56;BaseQRankSum=-2.164;DP=215;FS=5.588;HRun=0;HaplotypeScore=79.0169;InbreedingCoeff=-0.2840;MQ=71.66;MQ0=2;MQRankSum=-2.896;QD=10.43;ReadPosRankSum=0.753;VQSLOD=2.1916;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,6:6:6.02:120,6,0	0/1:3,0:3:6.80:49,0,7	0/1:20,0:9:2.80:3,0,174	0/1:24,0:15:19.85:20,0,63	0/1:12,1:15:26.80:165,0,27	1/1:4,1:6:12:142,12,0	1/1:1,0:1:3.01:52,3,0	1/1:10,1:10:23.51:272,24,0	0/1:2,0:2:9.79:39,0,10	0/1:4,0:5:13.44:108,0,13	0/1:7,0:7:18.81:28,0,19	1/1:0,5:4:3.01:59,3,0	1/1:1,1:2:5.97:67,6,0	1/1:0,4:4:3.01:62,3,0	0/1:4,1:5:20:40,0,20	1/1:3,1:5:9.03:134,9,0	1/1:7,0:6:14.30:119,14,0	1/1:1,0:2:4.83:52,5,0	0/1:10,0:10:38.14:51,0,38	0/1:20,0:20:91.04:91,0,101	0/1:0,0:2:6.45:10,0,6	1/1:0,3:3:6.02:125,6,0	0/1:9,0:9:42.04:55,0,42	1/1:2,0:3:5.97:66,6,0	0/1:5,4:9:56.11:103,0,56	0/1:5,0:8:4.84:179,0,5	0/1:3,0:6:15.66:125,0,16	0/0:6,0:6:17.55:0,18,112
chr10	13284431	.	CA	C	5647.48	PASS	AC=50;AF=0.962;AN=52;BaseQRankSum=-1.732;DP=174;FS=0.000;HRun=4;HaplotypeScore=85.0634;InbreedingCoeff=0.3978;MQ=34.75;MQ0=0;MQRankSum=-1.732;QD=33.03;ReadPosRankSum=0.022;VQSLOD=4.9868;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,19:19:51.16:610,51,0	1/1:0,6:6:18.06:216,18,0	./.	0/0:2,0:2:3.01:0,3,31	1/1:0,4:4:6.02:72,6,0	1/1:0,7:7:21.06:251,21,0	1/1:0,8:8:24.07:287,24,0	1/1:0,5:5:15:164,15,0	1/1:0,6:6:18.05:215,18,0	1/1:0,11:11:33.10:396,33,0	1/1:1,6:7:19.87:216,20,0	1/1:0,6:6:18.06:216,18,0	1/1:0,7:7:21.06:251,21,0	1/1:0,6:6:18.06:215,18,0	1/1:0,13:13:39.12:466,39,0	1/1:0,7:7:21.06:251,21,0	1/1:0,8:8:14.98:180,15,0	1/1:0,2:2:6.02:72,6,0	1/1:0,4:4:12.04:144,12,0	1/1:1,9:10:27.08:323,27,0	./.	1/1:0,6:6:15.05:178,15,0	1/1:0,4:4:12.04:143,12,0	1/1:0,3:3:3.01:36,3,0	1/1:0,7:7:21.06:251,21,0	1/1:0,7:6:18.06:216,18,0	1/1:0,7:7:21.06:243,21,0	1/1:0,1:1:3.01:36,3,0
chr10	13284441	.	G	GT	7221.09	PASS	AB=1.000;AC=55;AF=0.982;AN=56;BaseQRankSum=-1.476;DP=214;FS=27.725;HRun=1;HaplotypeScore=96.6376;InbreedingCoeff=0.0414;MQ=34.66;MQ0=0;MQRankSum=-2.931;QD=33.74;ReadPosRankSum=1.037;VQSLOD=2.9350;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,0:22:57.01:503,57,0	1/1:0,8:8:21.07:335,21,0	1/1:1,0:1:3:25,3,0	0/1:4,0:4:8.44:8,0,49	1/1:0,5:5:9.03:142,9,0	1/1:1,7:8:21.07:334,21,0	1/1:0,10:10:27.09:429,27,0	1/1:0,6:6:18.06:287,18,0	1/1:0,6:6:18.06:286,18,0	1/1:0,11:11:33.11:526,33,0	1/1:0,9:9:24.08:378,24,0	1/1:0,0:6:17.98:154,18,0	1/1:0,0:9:24.02:217,24,0	1/1:1,0:7:18.01:162,18,0	1/1:1,14:15:42.14:668,42,0	1/1:0,7:7:21.07:334,21,0	1/1:4,9:13:30.10:476,30,0	1/1:0,4:4:12.04:191,12,0	1/1:4,0:10:23.90:187,24,0	1/1:1,0:12:29.90:254,30,0	1/1:0,0:1:3:27,3,0	1/1:0,0:7:21.03:201,21,0	1/1:0,4:4:12.04:191,12,0	1/1:0,4:4:2.60:48,3,0	1/1:1,0:9:21.03:204,21,0	1/1:0,7:6:18.06:287,18,0	1/1:1,7:8:21.07:318,21,0	1/1:0,1:1:3.01:48,3,0
chr10	13285531	.	GA	G	4410.56	PASS	AB=0.938;AC=43;AF=0.768;AN=56;BaseQRankSum=-3.651;DP=403;FS=51.116;HRun=17;HaplotypeScore=57.5862;InbreedingCoeff=0.5664;MQ=60.36;MQ0=12;MQRankSum=1.291;QD=13.83;ReadPosRankSum=3.365;VQSLOD=1.2805;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:25,2:27:29.76:353,30,0	1/1:3,0:3:9:80,9,0	0/0:33,0:9:10.87:0,11,132	0/0:19,0:9:8.98:0,9,134	1/1:19,2:21:50.69:428,51,0	1/1:12,4:16:16.69:280,17,0	1/1:18,1:19:26.32:241,26,0	1/1:11,17:27:9.20:311,9,0	1/1:6,0:6:11.79:106,12,0	1/1:15,0:15:32.01:292,32,0	1/1:3,9:12:15.01:133,15,0	1/1:6,0:6:5.94:52,6,0	0/1:10,1:11:2.84:93,0,3	1/1:8,0:8:10.94:105,11,0	1/1:5,0:5:12:108,12,0	1/1:20,0:20:20.19:299,20,0	0/1:16,1:17:6.55:189,0,7	0/1:19,1:20:8.45:266,0,8	0/0:15,0:14:24.07:0,24,222	0/0:16,0:15:35.23:0,35,383	0/0:1,0:1:3.01:0,3,35	1/1:0,3:3:6:54,6,0	1/1:11,2:13:26.99:236,27,0	1/1:8,0:8:5.18:53,5,0	1/1:17,1:18:17.74:136,18,0	1/1:20,2:22:47.31:416,47,0	1/1:5,10:15:2.06:25,2,0	1/1:5,1:6:17.99:157,18,0
chr10	13285588	.	T	TTTCCTTCC	5287.92	PASS	AB=1.000;AC=41;AF=0.854;AN=48;BaseQRankSum=1.897;DP=390;FS=19.714;HRun=0;HaplotypeScore=108.8303;InbreedingCoeff=0.6424;MQ=63.64;MQ0=2;MQRankSum=-2.672;QD=17.17;ReadPosRankSum=0.240;VQSLOD=2.5138;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:16,1:16:9.92:212,10,0	1/1:7,0:7:12.03:254,12,0	./.	./.	1/1:21,0:21:24.06:461,24,0	1/1:10,4:13:6.02:243,6,0	1/1:16,0:16:9.02:202,9,0	0/1:27,0:27:0:0,0,0	1/1:11,0:11:6.02:87,6,0	1/1:15,0:14:5.97:95,6,0	1/1:11,0:11:13.59:234,14,0	1/1:8,3:11:3.01:120,3,0	1/1:10,0:10:11.98:153,12,0	1/1:8,2:10:6.02:243,6,0	./.	1/1:17,0:17:12.04:218,12,0	1/1:24,0:27:51.01:992,51,0	1/1:13,0:13:5.99:70,6,0	0/0:16,0:16:21.01:0,21,324	0/0:14,0:14:11.98:0,12,246	0/0:13,0:13:21.07:0,21,463	./.	1/1:12,0:13:18.06:440,18,0	1/1:11,0:11:15.02:305,15,0	1/1:13,1:14:8.96:190,9,0	1/1:22,0:21:25.80:458,26,0	1/1:13,0:13:5.94:44,6,0	1/1:5,0:7:9.03:265,9,0
chr10	13285778	.	TCGC	T	886.07	PASS	AB=0.852;AC=34;AF=0.680;AN=50;BaseQRankSum=8.205;DP=424;FS=0.000;HRun=0;HaplotypeScore=70.5069;InbreedingCoeff=0.1328;MQ=42.93;MQ0=96;MQRankSum=-0.801;QD=3.32;ReadPosRankSum=3.413;VQSLOD=1.3837;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:10,0:8:8.62:25,9,0	1/1:3,1:3:0.47:1,0,0	0/0:41,0:11:23.01:0,23,304	0/0:48,0:13:38.87:0,39,514	./.	0/1:5,9:10:37.18:243,0,37	0/1:9,12:13:65.13:192,0,65	1/1:3,0:2:2.04:6,2,0	0/1:11,1:6:34.56:56,0,35	./.	./.	1/1:14,0:13:20.37:58,20,0	0/1:9,1:11:23.19:23,0,34	1/1:20,0:16:21.07:71,21,0	1/1:13,0:8:10.18:49,10,0	1/1:9,0:6:10.99:37,11,0	0/1:21,0:18:18.85:24,0,19	0/1:17,1:15:24.28:24,0,77	0/1:22,2:18:40.43:40,0,641	0/0:6,0:4:12.03:0,12,192	0/0:49,2:41:75.26:0,75,1361	1/1:6,1:5:2.04:6,2,0	1/1:6,0:4:4.07:12,4,0	0/1:30,1:27:19.75:78,0,20	1/1:10,1:9:10.92:39,11,0	1/1:4,0:3:4.07:12,4,0	1/1:7,0:4:9.11:43,9,0	1/1:4,0:3:2.04:6,2,0
chr10	13285779	.	C	CT	3953.55	PASS	AB=0.758;AC=34;AF=0.680;AN=50;BaseQRankSum=0.471;DP=451;FS=0.000;HRun=1;HaplotypeScore=55.9938;InbreedingCoeff=0.4662;MQ=41.46;MQ0=124;MQRankSum=0.831;QD=16.27;ReadPosRankSum=2.798;VQSLOD=3.7654;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,6:7:8.90:187,9,0	1/1:2,2:3:0.47:1,0,0	0/0:41,0:11:22.89:0,23,290	0/0:48,0:13:39.03:0,39,467	./.	0/1:14,0:9:1.79:2,0,36	0/0:21,0:14:5.11:0,5,74	1/1:1,2:2:3.01:48,3,0	0/1:8,5:6:24.77:133,0,25	./.	./.	1/1:1,13:13:30.10:478,30,0	0/1:4,8:12:14.45:310,0,14	1/1:6,16:16:22.26:422,22,0	1/1:9,4:7:10.13:189,10,0	1/1:4,5:6:11.90:192,12,0	1/1:12,14:17:29.77:406,30,0	0/1:16,11:16:46.77:353,0,47	0/0:26,0:20:33.62:0,34,503	0/0:6,0:4:12.04:0,12,167	0/0:54,0:41:74.79:0,75,1031	1/1:3,4:5:3.01:48,3,0	1/1:3,3:4:6.02:96,6,0	1/1:15,21:26:6.16:593,6,0	1/1:6,4:9:7.03:184,7,0	1/1:4,2:3:6.02:96,6,0	1/1:2,5:4:12.03:168,12,0	1/1:3,1:3:3.01:48,3,0
chr10	13287572	.	CAA	C	720.78	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=-2.489;DP=552;FS=3.376;HRun=14;HaplotypeScore=100.8932;InbreedingCoeff=0.3705;MQ=65.98;MQ0=6;MQRankSum=0.587;QD=4.32;ReadPosRankSum=1.954;VQSLOD=0.1783;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:28:43.26:0,43,369	0/0:1,0:5:6.01:0,6,57	0/1:44,0:18:7.69:8,0,115	0/0:31,0:17:18.89:0,19,127	0/1:8,0:29:7.25:7,0,276	1/1:1,20:21:54.06:498,54,0	1/1:1,20:22:29.89:324,30,0	0/0:12,0:20:16.07:0,16,158	0/0:15,0:18:12.68:0,13,213	0/0:17,0:25:36:0,36,335	0/0:16,0:20:32.64:0,33,252	0/0:3,0:15:9.01:0,9,82	0/0:7,0:7:10.51:0,11,89	0/0:5,0:14:14.96:0,15,128	0/0:14,0:17:23.81:0,24,244	0/1:20,0:21:0.14:0,0,152	0/0:15,0:19:34.24:0,34,338	0/0:17,0:18:9.64:0,10,139	0/0:15,0:15:37.94:0,38,500	0/0:24,0:26:67.65:0,68,797	0/0:16,0:18:42.34:0,42,494	0/0:1,0:13:18.46:0,18,164	0/1:9,0:12:0.50:0,0,97	0/0:12,0:12:8.18:0,8,69	0/0:3,0:20:29.79:0,30,282	0/0:8,0:31:24.82:0,25,348	0/1:17,0:17:17.96:18,0,80	0/0:9,0:12:10.42:0,10,114
chr10	13287658	.	T	TGGAA	15387.60	PASS	AB=1.000;AC=47;AF=0.839;AN=56;BaseQRankSum=5.862;DP=509;FS=0.000;HRun=0;HaplotypeScore=127.8380;InbreedingCoeff=0.7809;MQ=55.21;MQ0=4;MQRankSum=-0.219;QD=33.97;ReadPosRankSum=-0.306;VQSLOD=4.3494;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:26:51.04:548,51,0	1/1:1,13:15:12.04:265,12,0	0/0:13,0:9:11.98:0,12,119	0/0:12,0:7:2.54:0,3,27	1/1:28,6:34:81.08:1379,81,0	1/1:25,0:25:61.84:942,62,0	1/1:25,0:24:51.03:696,51,0	1/1:34,0:31:65.97:812,66,0	1/1:10,1:11:30.04:392,30,0	1/1:21,3:24:63.12:1003,63,0	1/1:14,0:14:42.08:667,42,0	1/1:18,0:18:45.67:591,46,0	1/1:14,0:14:32.97:474,33,0	1/1:18,0:17:41.83:638,42,0	1/1:14,6:20:54.05:907,54,0	1/1:13,2:15:36.09:616,36,0	1/1:16,1:17:42.12:658,42,0	1/1:22,0:22:35.97:581,36,0	0/1:15,0:15:10.15:10,0,273	0/0:14,0:14:16.78:0,17,409	0/0:17,0:17:17.34:0,17,350	1/1:10,0:9:21.50:320,21,0	1/1:10,0:10:30:347,30,0	1/1:8,3:11:24.07:468,24,0	1/1:23,0:23:54.90:785,55,0	1/1:16,5:21:51.08:957,51,0	1/1:22,4:26:72.17:1204,72,0	1/1:3,1:4:6.02:126,6,0
chr10	13287669	.	AAGGG	A	4678.17	PASS	AB=0.973;AC=27;AF=0.482;AN=56;BaseQRankSum=-6.695;DP=531;FS=20.248;HRun=0;HaplotypeScore=164.6956;InbreedingCoeff=-0.6066;MQ=51.52;MQ0=4;MQRankSum=5.107;QD=9.32;ReadPosRankSum=-7.298;VQSLOD=0.3869;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:34,0:33:45.93:522,46,0	0/1:20,0:20:62.78:63,0,128	0/0:9,0:5:11.98:0,12,98	0/0:8,0:3:1.91:0,2,26	0/1:30,1:31:99:302,0,328	0/1:19,3:26:99:242,0,193	0/1:22,0:21:20.24:260,0,20	0/1:37,0:34:44.93:363,0,45	0/1:10,0:10:49.60:50,0,95	0/1:24,0:24:99:312,0,213	0/1:14,1:15:0.11:241,0,0	0/1:19,1:20:67.42:187,0,67	0/1:14,0:14:54.41:150,0,54	0/1:19,2:20:95.66:195,0,96	0/1:25,0:25:99:109,0,257	0/1:14,1:15:99:127,0,105	0/1:17,1:18:91.63:172,0,92	1/1:18,4:22:40.04:303,40,0	0/1:19,0:19:28.12:28,0,260	0/0:12,0:12:31.89:0,32,393	0/1:18,0:18:30.64:31,0,275	0/1:13,0:12:34.46:150,0,34	0/1:9,1:10:74.08:74,0,99	0/1:12,0:12:0.94:1,0,250	0/1:23,1:24:88.53:271,0,89	0/1:21,1:22:99:233,0,226	0/1:25,0:25:99:275,0,196	0/1:5,0:5:18.49:18,0,35
chr10	13287709	.	A	AAGGT	3665.55	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=13.535;DP=604;FS=36.956;HRun=0;HaplotypeScore=152.5655;InbreedingCoeff=-0.4205;MQ=62.22;MQ0=2;MQRankSum=-9.462;QD=8.52;ReadPosRankSum=2.158;VQSLOD=1.2769;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:43.43:0,43,648	0/1:13,0:13:91.45:112,0,91	0/0:19,0:17:6.80:0,7,219	0/0:17,0:14:32.17:0,32,411	0/1:29,0:29:99:305,0,240	1/1:23,7:30:83.96:1272,84,0	1/1:6,18:26:3.01:75,3,0	0/0:33,0:32:74.59:0,75,693	0/1:18,0:18:87.22:140,0,87	0/1:21,0:21:99:191,0,253	0/1:13,0:12:43.30:43,0,110	0/1:22,0:22:35.79:36,0,225	0/1:11,0:11:19.09:19,0,128	0/1:22,0:21:3.08:3,0,291	0/1:31,0:31:99:351,0,124	0/1:18,0:18:99:142,0,158	0/1:22,0:22:39.73:40,0,126	0/1:24,0:24:11.61:12,0,231	0/0:19,0:18:38.31:0,38,306	0/1:11,0:11:87.42:87,0,118	0/0:35,0:35:64.38:0,64,610	0/0:16,0:15:28.19:0,28,222	0/1:15,0:15:99:109,0,145	0/1:21,0:21:83.44:83,0,199	0/1:23,0:23:46.95:47,0,182	0/1:34,0:34:99:272,0,525	0/1:16,0:16:67.86:283,0,68	0/1:9,0:9:43.73:44,0,108
chr10	13288402	.	A	AG	8588.31	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-6.537;DP=476;FS=9.946;HRun=2;HaplotypeScore=53.3271;InbreedingCoeff=0.9904;MQ=79.84;MQ0=0;MQRankSum=-1.666;QD=38.86;ReadPosRankSum=2.502;VQSLOD=4.9465;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,102,1251	1/1:1,7:8:18.06:259,18,0	0/0:9,0:9:21.05:0,21,238	0/0:12,0:13:26.37:0,26,247	1/1:0,5:5:15.05:216,15,0	0/0:13,0:13:39.11:0,39,471	0/0:19,0:19:57.17:0,57,693	1/1:2,11:13:33.09:451,33,0	1/1:0,17:17:45.15:648,45,0	1/1:2,16:18:48.16:691,48,0	1/1:2,4:6:18.06:238,18,0	0/0:25,0:25:75.21:0,75,905	0/0:16,0:16:48.15:0,48,594	0/0:15,0:15:45.10:0,45,540	1/1:0,10:10:30.10:432,30,0	1/1:0,8:8:24.08:346,24,0	1/1:1,32:33:87.29:1253,87,0	1/1:1,26:27:75.25:1080,75,0	0/0:19,0:19:54.16:0,54,652	0/0:6,0:6:15.05:0,15,186	0/0:68,0:68:99:0,193,2380	0/0:7,0:7:21.02:0,21,241	1/1:0,10:10:27.09:389,27,0	1/1:2,25:27:72.24:1037,72,0	0/0:10,0:10:30.09:0,30,372	1/1:0,17:17:51.17:730,51,0	1/1:0,13:13:39.13:561,39,0	1/1:0,9:9:18.06:259,18,0
chr10	13288633	.	T	TTGAA	15841.27	PASS	AB=0.644;AC=50;AF=0.893;AN=56;BaseQRankSum=-2.725;DP=554;FS=29.980;HRun=0;HaplotypeScore=91.7526;InbreedingCoeff=0.5849;MQ=75.41;MQ0=0;MQRankSum=-4.581;QD=30.70;ReadPosRankSum=2.725;VQSLOD=2.8472;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,0:27:21:286,21,0	1/1:1,3:4:9.03:200,9,0	0/0:22,0:20:11.97:0,12,134	0/0:16,0:15:17.87:0,18,185	1/1:4,7:12:24.01:426,24,0	1/1:3,10:15:24.08:573,24,0	0/1:9,14:23:12.25:704,0,12	1/1:17,14:33:57.02:842,57,0	1/1:6,16:22:33.11:796,33,0	1/1:12,18:32:60.10:1112,60,0	1/1:4,8:13:23.83:429,24,0	1/1:14,0:22:24.08:394,24,0	1/1:12,0:24:33.11:516,33,0	1/1:10,0:26:42.10:704,42,0	1/1:6,13:21:24.08:579,24,0	1/1:5,7:13:12.04:290,12,0	1/1:11,16:27:36.12:868,36,0	1/1:4,9:13:21.54:508,22,0	1/1:12,9:24:39.04:617,39,0	1/1:4,8:14:33.01:683,33,0	1/1:8,18:26:33.11:796,33,0	1/1:9,0:15:18.06:257,18,0	0/1:4,4:8:33.24:240,0,33	1/1:9,23:33:57.20:1374,57,0	1/1:7,0:15:18.06:255,18,0	1/1:8,10:19:39.10:803,39,0	1/1:4,13:18:30.10:723,30,0	1/1:3,13:17:36.12:868,36,0
chr10	13289628	.	AAGG	A	12517.93	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=14.656;DP=650;FS=8.934;HRun=0;HaplotypeScore=98.0891;InbreedingCoeff=0.9954;MQ=84.06;MQ0=0;MQRankSum=-4.715;QD=38.52;ReadPosRankSum=2.759;VQSLOD=5.5347;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:78.23:0,78,1713	1/1:2,11:13:26.17:538,26,0	0/0:23,0:23:53.33:0,53,1080	0/0:24,0:25:59.94:0,60,1137	1/1:2,17:19:42.03:651,42,0	0/0:17,0:17:51.18:0,51,1158	0/0:24,0:24:66.20:0,66,1406	1/1:1,20:21:57.13:867,57,0	1/1:0,28:28:66.23:1121,66,0	1/1:4,35:39:99:1758,108,0	1/1:1,11:12:29.93:384,30,0	0/0:27,0:27:81.26:0,81,1804	0/0:31,0:31:81.24:0,81,1817	0/0:23,0:23:63.19:0,63,1311	1/1:0,23:23:47.95:817,48,0	1/1:1,21:22:48.16:818,48,0	1/1:1,35:36:78.22:1298,78,0	1/1:1,22:23:48.12:787,48,0	0/0:24,0:24:69.24:0,69,1474	0/0:21,0:21:60.18:0,60,1263	0/0:44,0:44:99:0,129,2873	0/0:22,0:22:66.23:0,66,1499	1/1:1,14:15:29.71:409,30,0	1/1:0,21:21:45.15:766,45,0	0/0:17,0:17:51.18:0,51,1175	1/1:1,31:32:90.27:1433,90,0	1/1:0,15:15:39.13:665,39,0	1/1:1,5:6:12.04:204,12,0
chr10	13290539	.	C	CTGTG	3602.51	PASS	AB=0.664;AC=34;AF=0.654;AN=52;BaseQRankSum=-4.269;DP=644;FS=7.180;HRun=0;HaplotypeScore=115.2712;InbreedingCoeff=0.5492;MQ=58.06;MQ0=27;MQRankSum=0.722;QD=9.43;ReadPosRankSum=-0.930;VQSLOD=2.0680;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:45:18.49:0,18,187	1/1:5,1:9:3.01:69,3,0	./.	./.	1/1:17,1:18:5.89:132,6,0	0/0:16,0:23:5.97:0,6,56	0/0:11,0:20:14.93:0,15,127	1/1:21,0:21:7.77:58,8,0	1/1:15,0:15:12.48:182,12,0	1/1:15,8:22:18.04:323,18,0	1/1:13,0:13:8.91:102,9,0	0/0:13,0:17:11.98:0,12,104	0/0:8,0:9:6.01:0,6,56	0/0:9,0:14:9.01:0,9,83	1/1:12,5:17:6.02:140,6,0	1/1:17,0:17:2.88:116,3,0	1/1:19,11:30:19.80:423,20,0	0/1:21,12:34:64.74:306,0,65	1/1:29,0:26:15.02:262,15,0	1/1:18,0:18:3.01:67,3,0	1/1:21,0:20:24.08:475,24,0	0/0:9,0:10:3:0,3,28	1/1:7,4:13:5.75:82,6,0	0/1:15,23:42:31.32:409,0,31	0/0:14,0:19:9.01:0,9,84	1/1:22,0:25:15.23:189,15,0	1/1:17,6:23:3.01:66,3,0	1/1:9,0:8:12.04:200,12,0
chr10	13291502	.	A	AC	4830.93	PASS	AB=0.602;AC=30;AF=0.536;AN=56;BaseQRankSum=-8.669;DP=572;FS=22.450;HRun=9;HaplotypeScore=72.3817;InbreedingCoeff=0.6688;MQ=76.58;MQ0=0;MQRankSum=-1.500;QD=15.94;ReadPosRankSum=-0.100;VQSLOD=3.4163;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,119,980	1/1:2,7:9:18.05:199,18,0	0/0:25,0:24:26.88:0,27,283	0/0:17,0:15:17.93:0,18,123	0/1:7,11:18:1.99:199,0,2	1/1:1,13:14:24.06:265,24,0	1/1:4,14:18:12.03:133,12,0	0/1:10,8:18:7.54:148,0,8	1/1:2,15:17:10.08:339,10,0	1/1:8,13:21:39.09:421,39,0	1/1:2,13:15:15.10:139,15,0	0/0:24,0:25:39.23:0,39,454	0/0:21,0:21:40.44:0,40,495	0/0:21,0:21:56.94:0,57,485	1/1:6,19:25:1.02:239,1,0	1/1:5,17:22:0.55:209,1,0	1/1:1,22:23:50.97:564,51,0	1/1:10,8:18:22.65:453,23,0	0/0:26,0:26:56.72:0,57,472	0/0:21,0:21:53.99:0,54,469	0/0:29,0:29:35.71:0,36,525	0/0:16,0:16:38.97:0,39,335	1/1:7,11:18:17.88:199,18,0	0/1:4,16:20:22.01:235,0,22	0/0:20,0:20:12.21:0,12,331	1/1:6,17:23:45.16:555,45,0	1/1:12,4:17:42.45:446,42,0	0/1:1,6:7:14.02:88,0,14
chr10	13292580	.	A	AC	3684.98	PASS	AB=0.670;AC=21;AF=0.375;AN=56;BaseQRankSum=-8.751;DP=519;FS=0.403;HRun=9;HaplotypeScore=57.3240;InbreedingCoeff=0.7649;MQ=78.02;MQ0=1;MQRankSum=-1.553;QD=16.60;ReadPosRankSum=-0.047;VQSLOD=3.4958;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:4,17:21:9.99:356,0,10	0/0:12,0:12:29.92:0,30,248	0/0:14,0:14:35.97:0,36,308	0/0:17,0:17:20.95:0,21,177	0/0:11,0:11:32.78:0,33,270	1/1:3,15:20:47.95:503,48,0	1/1:5,19:24:42.11:465,42,0	0/0:25,0:25:26.92:0,27,225	0/0:19,0:19:53.94:0,54,460	0/0:20,0:20:44.95:0,45,387	0/0:6,0:6:14.99:0,15,130	1/1:7,24:31:48.13:527,48,0	1/1:2,14:17:32.94:352,33,0	1/1:1,18:20:27.07:296,27,0	0/0:16,0:16:41.98:0,42,365	0/0:18,0:18:40.98:0,41,381	0/0:43,0:43:99:0,114,987	0/0:25,0:25:65.80:0,66,556	1/1:7,8:15:26.86:246,27,0	1/1:2,3:5:5.97:53,6,0	1/1:11,27:37:40.12:671,40,0	0/1:4,8:12:8.01:137,0,8	0/0:6,1:8:17.03:0,17,136	0/0:27,0:27:62.98:0,63,547	1/1:1,0:12:11.94:62,12,0	0/0:20,0:20:53.98:0,54,466	0/0:16,0:16:44.96:0,45,384	0/1:5,1:6:18.19:18,0,89
chr10	13292691	.	A	ACG	1623.16	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-8.828;DP=651;FS=0.616;HRun=0;HaplotypeScore=83.0022;InbreedingCoeff=0.9350;MQ=58.42;MQ0=6;MQRankSum=-0.251;QD=19.79;ReadPosRankSum=1.845;VQSLOD=3.4012;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:71.46:0,71,817	0/0:10,0:10:18:0,18,213	0/0:15,0:9:6.88:0,7,59	0/0:20,0:8:8.59:0,9,66	0/0:18,0:18:48.12:0,48,592	0/0:17,0:17:48.06:0,48,580	0/0:30,0:30:78.12:0,78,913	0/0:26,0:25:54.10:0,54,583	0/0:23,0:23:63.15:0,63,786	0/0:24,0:24:57.13:0,57,672	0/0:12,0:12:30.07:0,30,364	0/0:24,0:24:60.09:0,60,698	0/0:14,0:14:32.64:0,33,387	0/0:28,0:28:66.07:0,66,785	0/0:22,0:22:54.12:0,54,695	0/0:12,0:12:24.03:0,24,270	0/0:36,0:36:99:0,99,1266	0/0:51,0:51:99:0,141,1669	1/1:3,8:11:17.63:303,18,0	1/1:0,11:12:18.05:311,18,0	1/1:13,46:57:36.07:1150,36,0	0/0:15,0:15:33.08:0,33,409	0/0:12,0:12:30.02:0,30,343	0/0:67,0:67:99:0,183,2144	0/0:21,0:21:45.13:0,45,580	0/0:21,0:21:54.15:0,54,678	0/0:12,0:12:30.07:0,30,367	0/0:8,0:8:17.99:0,18,187
chr10	13293172	.	C	CA	1274.85	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-7.447;DP=653;FS=0.000;HRun=6;HaplotypeScore=66.1865;InbreedingCoeff=0.9973;MQ=77.37;MQ0=0;MQRankSum=0.435;QD=28.97;ReadPosRankSum=-0.578;VQSLOD=3.8990;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:59,0:59:99:0,159,1607	0/0:8,0:8:21.05:0,21,214	0/0:22,0:22:35.86:0,36,352	0/0:20,0:19:34.69:0,35,304	0/0:25,0:25:75.17:0,75,765	1/1:0,21:21:57.18:717,57,0	1/1:3,20:23:54.17:679,54,0	0/0:29,0:29:72.15:0,72,724	0/0:19,0:19:57.11:0,57,574	0/0:20,0:20:54.12:0,54,551	0/0:16,0:16:36.08:0,36,367	0/0:23,0:23:69.13:0,69,691	0/0:22,0:22:66.15:0,66,673	0/0:21,0:21:60.14:0,60,612	0/0:26,0:26:72.16:0,72,735	0/0:21,0:21:57.13:0,57,582	0/0:33,0:33:90.19:0,90,912	0/0:27,0:27:81.14:0,81,815	0/0:25,0:25:60.13:0,60,612	0/0:11,0:11:30.05:0,30,299	0/0:30,0:30:84.19:0,84,857	0/0:17,0:17:39.08:0,39,398	0/0:17,0:17:48.11:0,48,490	0/0:26,0:26:72.16:0,72,735	0/0:23,0:23:57.12:0,57,581	0/0:29,0:29:78.17:0,78,796	0/0:26,0:26:60.13:0,60,612	0/0:14,0:14:39.09:0,39,398
chr10	13294361	.	G	GGTGT	3830.78	PASS	AB=0.870;AC=46;AF=0.885;AN=52;BaseQRankSum=-1.142;DP=648;FS=7.827;HRun=0;HaplotypeScore=136.5773;InbreedingCoeff=0.1058;MQ=63.81;MQ0=11;MQRankSum=-2.444;QD=6.62;ReadPosRankSum=3.042;VQSLOD=1.7115;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:28,13:42:54.37:205,0,54	1/1:9,0:8:6.01:85,6,0	1/1:15,0:10:0.47:1,0,0	./.	0/1:18,8:28:24.52:168,0,25	1/1:22,0:21:18:213,18,0	1/1:27,0:27:6:62,6,0	1/1:27,0:27:5.92:39,6,0	1/1:18,0:18:14.97:121,15,0	1/1:15,0:21:18.50:256,18,0	1/1:6,4:10:2.88:70,3,0	1/1:13,3:20:5.75:83,6,0	1/1:15,0:15:5.98:46,6,0	1/1:15,4:22:11.78:219,12,0	1/1:16,0:24:20.52:276,21,0	1/1:8,0:19:2.72:52,3,0	1/1:15,5:22:6.02:141,6,0	1/1:12,4:15:3.01:70,3,0	./.	0/0:22,0:22:14.95:0,15,146	0/1:51,0:50:15:15,0,121	1/1:28,0:28:33.02:409,33,0	0/1:17,0:17:19.19:19,0,36	1/1:22,22:49:35.59:697,36,0	1/1:22,0:22:15.48:187,15,0	1/1:20,0:20:17.95:168,18,0	1/1:12,0:17:10.30:117,10,0	1/1:11,0:12:6.02:112,6,0
chr10	13296339	.	G	GA	2725.62	PASS	AB=0.771;AC=43;AF=0.768;AN=56;BaseQRankSum=3.052;DP=517;FS=5.600;HRun=15;HaplotypeScore=101.0373;InbreedingCoeff=0.4968;MQ=70.83;MQ0=6;MQRankSum=0.681;QD=6.41;ReadPosRankSum=0.467;VQSLOD=2.7856;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:19,7:28:5.65:236,0,6	1/1:9,0:10:13.93:56,14,0	0/0:32,0:13:10:0,10,51	0/0:23,0:14:6.91:0,7,52	1/1:17,0:17:31.25:131,31,0	0/0:18,1:19:3.64:0,4,129	0/0:16,0:17:35.17:0,35,215	1/1:19,0:20:31.44:141,31,0	1/1:13,0:12:16.78:71,17,0	1/1:21,0:21:37.92:155,38,0	1/1:8,0:10:10.77:56,11,0	0/1:17,2:22:6.20:116,0,6	1/1:3,2:5:9.41:68,9,0	1/1:5,8:12:8.44:50,8,0	1/1:18,1:19:23.17:154,23,0	1/1:17,0:18:35.30:152,35,0	1/1:26,0:26:29.95:174,30,0	1/1:28,0:28:31.42:172,31,0	1/1:13,2:14:10.39:90,10,0	0/1:8,11:21:3.17:90,0,3	0/1:4,10:16:6.51:105,0,7	1/1:10,2:11:1.97:85,2,0	1/1:23,0:23:25.36:155,25,0	1/1:16,0:16:18.75:81,19,0	1/1:16,5:22:18.72:243,19,0	1/1:25,0:25:42.48:170,42,0	1/1:20,0:22:27.25:130,27,0	0/1:2,0:2:0:0,0,0
chr10	13296351	.	A	AAG	7632.85	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-9.977;DP=552;FS=3.263;HRun=0;HaplotypeScore=81.6319;InbreedingCoeff=0.9719;MQ=68.72;MQ0=7;MQRankSum=1.246;QD=26.60;ReadPosRankSum=7.447;VQSLOD=5.5721;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:32.97:0,33,393	1/1:0,7:8:17.43:232,17,0	0/0:38,0:16:34.55:0,35,303	0/0:29,0:14:11.12:0,11,138	1/1:3,17:21:24.75:519,25,0	0/0:18,0:18:50.88:0,51,519	0/0:19,0:19:57.07:0,57,645	1/1:4,19:26:57.34:594,57,0	1/1:2,10:11:15.04:268,15,0	1/1:2,19:23:45.73:763,46,0	1/1:4,7:11:26:309,26,0	0/0:22,0:22:32.73:0,33,371	0/0:8,0:8:19.79:0,20,138	0/0:15,0:14:23.52:0,24,163	1/1:2,16:20:23.47:538,23,0	1/1:2,14:19:39.06:538,39,0	1/1:3,20:29:45.66:660,46,0	1/1:3,29:35:46.38:750,46,0	0/0:21,0:20:49.87:0,50,387	0/0:19,0:19:35.90:0,36,309	0/0:16,0:16:31.29:0,31,217	0/0:10,0:9:15.91:0,16,148	1/1:3,16:22:18.50:578,19,0	1/1:2,10:15:23.76:292,24,0	0/0:21,0:21:52.27:0,52,368	1/1:1,22:24:72.05:885,72,0	1/1:8,8:19:50.97:659,51,0	1/1:2,0:2:5.99:48,6,0
chr10	13297584	.	G	GGAAGCACCTTGGTA	63116.21	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-7.837;DP=835;FS=14.610;HRun=0;HaplotypeScore=328.4389;InbreedingCoeff=0.9975;MQ=71.03;MQ0=0;MQRankSum=-22.453;QD=139.64;ReadPosRankSum=-2.399;VQSLOD=3.7833;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,108,4236	1/1:11,6:18:42.14:2635,42,0	0/0:13,0:13:30.10:0,30,804	0/0:25,0:25:51.61:0,52,1507	1/1:12,10:23:45.63:1868,46,0	1/1:10,10:22:48.16:3035,48,0	1/1:25,8:37:87.30:5389,87,0	1/1:31,2:33:90.31:4889,90,0	1/1:13,18:31:84.29:5364,84,0	1/1:19,17:38:99:6411,102,0	1/1:12,8:23:47.93:2073,48,0	0/0:42,0:42:99:0,120,4660	0/0:33,0:33:90.28:0,90,3412	0/0:38,0:38:99:0,99,4010	1/1:17,10:30:75.26:4616,75,0	1/1:20,17:39:99:6040,99,0	1/1:7,5:15:27.09:1695,27,0	1/1:11,8:23:39.13:2704,39,0	0/0:30,0:30:81.26:0,81,2924	0/0:18,0:18:54.15:0,54,1983	0/0:94,0:94:99:0,265,10367	0/0:25,0:25:72.20:0,72,2736	1/1:9,10:20:48.16:2172,48,0	1/1:14,14:30:54.66:2482,55,0	0/0:23,0:23:66.23:0,66,2657	1/1:17,17:38:99:6780,108,0	1/1:10,13:26:66.23:4228,66,0	1/1:2,3:5:15.05:736,15,0
chr10	13297850	.	TGG	T	393.68	PASS	AB=0.772;AC=2;AF=0.036;AN=56;BaseQRankSum=6.622;DP=885;FS=7.101;HRun=3;HaplotypeScore=117.7020;InbreedingCoeff=-0.0371;MQ=82.73;MQ0=0;MQRankSum=6.503;QD=7.72;ReadPosRankSum=-1.744;VQSLOD=-0.4917;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:61,0:61:99:0,175,3235	0/0:12,0:12:36.12:0,36,695	0/1:16,8:24:99:282,0,641	0/1:20,6:27:99:200,0,800	0/0:20,0:20:45.14:0,45,836	0/0:22,0:22:66.23:0,66,1258	0/0:35,0:35:99:0,105,1925	0/0:43,0:43:99:0,126,2389	0/0:28,0:28:84.28:0,84,1582	0/0:38,0:38:99:0,111,2020	0/0:19,0:19:51.15:0,51,918	0/0:35,0:35:99:0,105,2022	0/0:40,0:40:99:0,117,2214	0/0:37,0:37:99:0,108,2077	0/0:36,0:36:99:0,105,1998	0/0:31,0:31:93.31:0,93,1765	0/0:41,0:41:99:0,120,2270	0/0:40,0:40:99:0,120,2279	0/0:21,0:21:54.17:0,54,986	0/0:30,0:30:87.30:0,87,1668	0/0:56,0:56:99:0,160,3071	0/0:29,0:29:87.30:0,87,1674	0/0:21,0:21:60.19:0,60,1107	0/0:41,0:41:99:0,123,2269	0/0:22,0:22:63.19:0,63,1209	0/0:39,0:39:99:0,114,2162	0/0:28,0:28:81.28:0,81,1561	0/0:9,0:9:27.09:0,27,522
chr10	13298380	.	T	TAA	3099.03	PASS	AB=0.784;AC=22;AF=0.393;AN=56;BaseQRankSum=-0.878;DP=450;FS=3.984;HRun=11;HaplotypeScore=69.2534;InbreedingCoeff=0.8103;MQ=72.25;MQ0=0;MQRankSum=0.476;QD=16.93;ReadPosRankSum=-1.957;VQSLOD=2.2014;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:5,26:32:42.43:848,42,0	0/0:10,0:10:24.03:0,24,232	0/0:14,0:13:3.70:0,4,66	0/0:12,0:9:5.21:0,5,37	0/0:27,0:27:40.34:0,40,533	1/1:5,13:21:35.56:443,36,0	1/1:2,11:14:26.58:356,27,0	0/0:24,0:24:63:0,63,591	0/0:10,0:10:23.78:0,24,217	0/1:11,0:11:0.71:1,0,180	0/0:13,0:13:13.38:0,13,271	1/1:1,4:7:5.81:79,6,0	1/1:0,5:6:11.53:139,12,0	1/1:1,15:17:39.09:527,39,0	0/0:19,0:19:29.93:0,30,288	0/0:15,0:15:36.02:0,36,349	0/0:22,0:22:60.08:0,60,579	0/0:23,0:23:59.90:0,60,559	0/1:5,0:21:15.30:134,0,15	1/1:5,0:17:31.71:162,32,0	1/1:0,0:8:9.98:34,10,0	1/1:2,6:8:18.02:237,18,0	0/0:14,0:14:14.24:0,14,270	0/0:10,0:12:20.71:0,21,236	1/1:5,15:21:29.51:348,30,0	0/0:21,0:21:44.98:0,45,436	0/0:20,0:21:53.75:0,54,506	0/0:9,0:10:29.79:0,30,273
chr10	13300540	.	TGGCTGA	T	224.70	PASS	AB=1.000;AC=18;AF=0.450;AN=40;BaseQRankSum=-0.081;DP=166;FS=1.145;HRun=0;HaplotypeScore=21.1294;InbreedingCoeff=0.0690;MQ=42.81;MQ0=21;MQRankSum=-0.547;QD=2.42;ReadPosRankSum=-1.068;VQSLOD=0.4809;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/0:2,0:2:2.68:0,3,11	0/0:17,0:3:8.52:0,9,54	0/0:18,0:4:4.88:0,5,46	./.	0/1:2,0:1:0:0,0,0	0/1:10,0:6:28.43:28,0,38	./.	0/0:1,0:1:2.60:0,3,10	0/0:6,0:5:0.54:0,1,11	./.	0/0:5,0:4:2.98:0,3,26	0/1:4,0:3:8.39:17,0,8	0/1:3,0:3:0.50:1,0,1	1/1:2,0:2:5.99:50,6,0	0/1:5,0:3:0.33:8,0,0	0/1:10,0:7:10.21:60,0,10	1/1:10,0:6:7.97:39,8,0	0/1:5,0:5:9.02:9,0,45	./.	0/0:12,0:6:2.97:0,3,20	./.	./.	0/1:29,0:21:73.14:73,0,78	1/1:3,0:3:0.47:1,0,0	1/1:3,5:6:3.89:28,4,0	./.	1/1:2,0:1:3:25,3,0
chr10	13302615	.	GC	G	1270.44	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=5.647;DP=492;FS=8.732;HRun=4;HaplotypeScore=55.6839;InbreedingCoeff=0.9947;MQ=74.92;MQ0=1;MQRankSum=-1.014;QD=28.23;ReadPosRankSum=0.353;VQSLOD=2.8961;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:81.23:0,81,1112	0/0:6,0:6:18.03:0,18,231	0/0:18,0:17:48.15:0,48,656	0/0:18,1:18:40.53:0,41,562	0/0:17,0:17:51.16:0,51,697	0/0:12,0:12:33.10:0,33,446	0/0:18,0:18:48.12:0,48,641	0/0:23,0:23:54.17:0,54,726	0/0:17,0:17:45.15:0,45,630	0/0:30,0:30:87.29:0,87,1212	0/0:14,0:14:42.13:0,42,571	0/0:19,0:19:57.17:0,57,778	0/0:21,0:21:57.19:0,57,798	0/0:18,0:18:54.18:0,54,753	0/0:9,0:9:21.07:0,21,294	0/0:16,0:16:39.13:0,39,546	0/0:19,0:19:42.11:0,42,567	0/0:15,0:15:45.15:0,45,630	1/1:0,14:13:39.07:441,39,0	1/1:0,9:9:24.07:288,24,0	1/1:1,21:22:56.98:684,57,0	0/0:19,0:19:54.18:0,54,755	0/0:13,0:13:39.13:0,39,543	0/0:20,0:20:48.16:0,48,671	0/0:18,0:18:51.16:0,51,697	0/0:16,0:16:48.16:0,48,672	0/0:27,0:27:72.24:0,72,996	0/0:15,0:15:42.14:0,42,587
chr10	13303304	.	C	CTGT	15223.99	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=17.982;DP=593;FS=6.204;HRun=0;HaplotypeScore=213.2128;InbreedingCoeff=0.9714;MQ=90.22;MQ0=0;MQRankSum=-18.150;QD=40.06;ReadPosRankSum=5.405;VQSLOD=4.9589;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,30:31:84.28:1362,84,0	1/1:2,6:9:27.02:381,27,0	0/0:28,0:28:72.27:0,72,1359	0/0:34,0:34:91.70:0,92,1472	1/1:0,16:16:6.57:115,7,0	0/0:18,0:18:48.13:0,48,886	0/0:42,0:42:99:0,123,2269	1/1:0,9:12:36.10:592,36,0	1/1:0,24:24:72.24:1116,72,0	1/1:1,20:21:60.21:1098,60,0	1/1:1,11:12:24.08:344,24,0	1/1:1,31:32:96.33:1498,96,0	1/1:1,26:27:81.27:1214,81,0	1/1:0,25:25:72.22:1056,72,0	1/1:0,27:27:78.26:1188,78,0	1/1:0,26:26:76.14:1136,76,0	1/1:3,11:14:26.96:369,27,0	1/1:2,12:14:42.14:755,42,0	0/0:16,0:16:48.16:0,48,865	0/0:17,0:17:51.17:0,51,943	0/0:58,0:58:99:0,166,3041	1/1:0,12:14:18.06:290,18,0	1/1:0,7:9:11.94:220,12,0	1/1:1,16:17:20.21:304,20,0	1/1:2,17:19:51.17:772,51,0	1/1:1,14:15:45.15:759,45,0	1/1:2,9:11:30.10:453,30,0	1/1:2,3:5:15.03:202,15,0
chr10	13303305	.	GACCCAA	G	14195.98	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=18.552;DP=585;FS=6.266;HRun=0;HaplotypeScore=242.4482;InbreedingCoeff=0.9679;MQ=89.32;MQ0=0;MQRankSum=-18.831;QD=38.16;ReadPosRankSum=6.289;VQSLOD=3.9207;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:2,30:32:84.13:1195,84,0	1/1:1,6:8:21.07:311,21,0	0/0:29,0:29:74.14:0,74,2724	0/0:31,0:31:89.61:0,90,2821	1/1:1,15:16:6.85:66,7,0	0/0:18,0:18:46.40:0,46,1632	0/0:42,0:42:99:0,123,4205	1/1:0,9:9:27.09:494,27,0	1/1:0,24:24:72.24:1117,72,0	1/1:0,20:20:60.21:1098,60,0	1/1:1,11:12:24.08:342,24,0	1/1:1,31:32:93.31:1390,93,0	1/1:1,26:27:78.26:1149,78,0	1/1:0,25:25:72.23:1059,72,0	1/1:1,27:28:81.27:1221,81,0	1/1:0,26:26:75.25:1136,75,0	1/1:2,11:13:24.06:348,24,0	1/1:2,12:14:37.87:586,38,0	0/0:17,0:17:51.18:0,51,1820	0/0:17,0:17:48.16:0,48,1759	0/0:59,0:59:99:0,171,5895	1/1:0,12:12:18.06:254,18,0	1/1:0,7:7:11.47:145,11,0	1/1:1,16:17:20.46:300,20,0	1/1:2,17:19:45.15:665,45,0	1/1:1,14:15:45.15:779,45,0	1/1:2,9:11:24.08:363,24,0	1/1:2,3:5:12.04:179,12,0
chr10	13311540	.	G	GC	6009.81	PASS	AB=1.000;AC=51;AF=0.911;AN=56;BaseQRankSum=0.492;DP=672;FS=14.154;HRun=1;HaplotypeScore=289.7235;InbreedingCoeff=0.8193;MQ=66.52;MQ0=0;MQRankSum=-2.411;QD=9.32;ReadPosRankSum=2.296;VQSLOD=0.6304;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:50,2:52:67.84:434,68,0	1/1:10,0:10:11.96:59,12,0	0/0:8,0:8:17.96:0,18,143	0/0:19,0:19:25.78:0,26,303	1/1:15,0:15:18.33:136,18,0	1/1:18,0:18:28.13:157,28,0	1/1:24,0:24:38.14:253,38,0	1/1:22,2:24:55.86:465,56,0	1/1:22,0:22:35.22:197,35,0	1/1:27,1:28:53.16:313,53,0	0/1:16,0:16:2.49:90,0,2	1/1:30,0:30:59.41:300,59,0	1/1:26,2:28:44.43:272,44,0	1/1:30,0:30:15.66:182,16,0	1/1:30,0:30:37.77:228,38,0	1/1:25,1:26:40.79:243,41,0	1/1:29,1:30:53.07:290,53,0	1/1:26,0:26:55.94:307,56,0	1/1:17,1:18:25.77:182,26,0	1/1:24,0:24:25.18:135,25,0	1/1:27,1:28:34.87:180,35,0	1/1:29,0:29:49.37:256,49,0	1/1:23,0:23:24.54:152,25,0	1/1:18,0:18:27.74:138,28,0	1/1:25,0:25:39.90:255,40,0	1/1:33,0:33:68.53:357,69,0	1/1:28,0:27:33.48:260,33,0	1/1:8,2:10:18.93:166,19,0
chr10	13312691	.	C	CA	638.35	PASS	AB=0.896;AC=17;AF=0.304;AN=56;BaseQRankSum=-4.306;DP=471;FS=0.000;HRun=15;HaplotypeScore=77.7301;InbreedingCoeff=0.0420;MQ=79.57;MQ0=0;MQRankSum=0.089;QD=2.66;ReadPosRankSum=-1.928;VQSLOD=-0.6075;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,1:41:27.65:0,28,250	0/0:8,0:8:8.73:0,9,54	0/1:24,1:20:0.78:1,0,46	0/0:12,0:10:7.79:0,8,38	0/1:10,1:13:12.41:12,0,34	1/1:7,7:15:14.83:115,15,0	0/1:9,12:21:10.34:129,0,10	0/0:23,0:25:17.19:0,17,107	0/0:7,0:9:7.39:0,7,41	0/0:9,0:9:16.22:0,16,94	0/0:13,0:14:13.67:0,14,78	0/1:17,0:17:8.38:8,0,31	0/0:12,0:14:12.68:0,13,65	0/1:17,2:19:28.11:28,0,72	0/0:23,0:26:18.13:0,18,91	0/1:14,0:16:11:11,0,133	0/0:20,0:24:0.58:0,1,80	0/1:21,1:25:3.53:4,0,169	1/1:8,7:16:4.89:155,5,0	1/1:5,11:16:11.76:180,12,0	0/1:10,7:17:26.60:125,0,27	0/1:8,1:11:12.35:12,0,35	0/0:10,0:10:11.63:0,12,72	0/0:17,0:18:25.22:0,25,147	0/1:10,2:14:9.39:9,0,50	0/0:15,1:18:24.41:0,24,137	0/1:10,0:14:7.94:8,0,38	0/0:3,0:3:5.86:0,6,36
chr10	13313979	.	G	GCTCA	9570.17	PASS	AB=0.980;AC=21;AF=0.375;AN=56;BaseQRankSum=19.137;DP=719;FS=3.578;HRun=0;HaplotypeScore=212.2614;InbreedingCoeff=-0.5850;MQ=71.30;MQ0=0;MQRankSum=-13.826;QD=18.16;ReadPosRankSum=7.083;VQSLOD=3.9847;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:37,0:37:99:309,0,454	0/1:12,0:12:91.13:249,0,91	0/0:21,0:21:60.98:0,61,1026	0/0:22,0:22:63.10:0,63,1179	0/1:31,0:31:99:448,0,329	0/0:23,0:23:66.18:0,66,1337	0/0:40,0:40:99:0,120,2372	0/1:20,11:41:99:1208,0,896	0/1:28,0:28:99:284,0,453	0/1:23,0:23:99:510,0,578	0/1:12,0:12:99:160,0,252	0/1:39,0:39:99:711,0,220	0/1:25,0:26:99:553,0,337	0/1:26,0:27:99:340,0,315	0/1:38,0:38:99:587,0,335	0/1:30,0:30:99:525,0,214	0/1:18,0:18:99:308,0,130	0/1:21,0:21:99:204,0,566	0/0:14,0:14:42.14:0,42,846	0/0:21,0:21:60.21:0,60,1237	0/0:51,0:51:99:0,153,3062	0/1:21,0:21:99:430,0,119	0/1:23,0:23:63.71:583,0,64	0/1:17,0:17:3.07:3,0,218	0/1:18,0:18:56.69:639,0,57	0/1:28,0:28:99:929,0,466	0/1:29,0:29:99:484,0,638	0/1:8,0:8:99:104,0,234
chr10	13313991	.	C	CATTCTCATCGCTT	39202.11	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=-11.019;DP=659;FS=2.555;HRun=0;HaplotypeScore=160.4504;InbreedingCoeff=0.9659;MQ=75.20;MQ0=0;MQRankSum=-13.338;QD=83.59;ReadPosRankSum=6.061;VQSLOD=4.1908;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,16:31:33.11:1805,33,0	1/1:0,11:12:18.53:1214,19,0	0/0:19,0:19:50.70:0,51,956	0/0:24,0:24:53.28:0,53,1261	1/1:0,18:21:35.99:1753,36,0	0/0:21,0:21:60.19:0,60,2176	0/0:38,0:38:99:0,111,3249	1/1:27,0:27:78.23:1930,78,0	1/1:0,17:23:21.07:1417,21,0	1/1:0,14:16:45.03:1779,45,0	1/1:0,6:10:20.94:712,21,0	1/1:0,29:33:47.76:3236,48,0	1/1:1,17:27:35.47:2350,35,0	1/1:2,15:21:27.09:1815,27,0	1/1:0,24:33:45.15:3035,45,0	1/1:0,22:30:36.12:2428,36,0	1/1:1,11:15:21.07:1331,21,0	1/1:1,14:22:21.04:1420,21,0	0/0:17,0:17:50.99:0,51,1233	0/0:19,0:19:54.14:0,54,1653	0/0:52,0:52:99:0,150,5196	1/1:1,21:25:36.04:2060,36,0	1/1:1,19:26:33.06:1990,33,0	1/1:1,9:17:5.91:53,6,0	1/1:0,16:20:42.14:2786,42,0	1/1:0,21:33:87.18:3115,87,0	1/1:1,16:24:35.21:2364,35,0	1/1:0,3:3:9.03:608,9,0
chr10	13314847	.	CA	C	1179.47	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.152;DP=610;FS=5.203;HRun=3;HaplotypeScore=55.9564;InbreedingCoeff=0.9993;MQ=77.13;MQ0=0;MQRankSum=0.264;QD=29.49;ReadPosRankSum=-0.099;VQSLOD=2.7185;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:84.28:0,84,1209	0/0:10,0:10:30.10:0,30,432	0/0:23,0:23:60.18:0,60,812	0/0:17,0:17:42.72:0,43,621	0/0:24,0:24:66.17:0,66,910	1/1:1,17:18:48.15:595,48,0	1/1:0,22:22:57.18:707,57,0	0/0:29,0:29:84.27:0,84,1179	0/0:17,0:17:48.16:0,48,690	0/0:27,0:27:78.26:0,78,1109	0/0:28,0:28:81.23:0,81,1098	0/0:17,0:17:45.15:0,45,637	0/0:23,0:23:69.20:0,69,938	0/0:19,0:19:57.19:0,57,821	0/0:24,0:24:72.24:0,72,1037	0/0:16,0:16:42.14:0,42,605	0/0:29,0:29:87.27:0,87,1229	0/0:24,0:24:72.13:0,72,988	0/0:19,0:19:57.17:0,57,787	0/0:23,0:23:63.20:0,63,888	0/0:12,0:12:36.12:0,36,508	0/0:19,0:19:57.19:0,57,821	0/0:23,0:23:66.22:0,66,940	0/0:10,0:10:30.10:0,30,431	0/0:29,0:29:84.23:0,84,1171	0/0:39,0:39:99:0,117,1684	0/0:28,0:28:84.28:0,84,1192	0/0:12,0:12:36.12:0,36,518
chr10	13315877	.	A	ATGTC	18812.52	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-15.994;DP=772;FS=0.328;HRun=0;HaplotypeScore=111.3168;InbreedingCoeff=0.9944;MQ=70.82;MQ0=2;MQRankSum=-2.767;QD=43.25;ReadPosRankSum=1.542;VQSLOD=5.3952;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:81.26:0,81,1317	1/1:1,7:8:12.04:291,12,0	0/0:31,0:29:36.11:0,36,562	0/0:22,0:21:18.06:0,18,277	1/1:4,23:26:60.21:1437,60,0	0/0:19,0:19:45.13:0,45,684	0/0:20,0:20:36.12:0,36,586	1/1:24,13:39:57.17:1240,57,0	1/1:9,21:32:48.16:1165,48,0	1/1:10,20:31:66.19:1543,66,0	1/1:7,14:21:42.14:1018,42,0	0/0:36,0:36:81.28:0,81,1315	0/0:22,0:22:51.16:0,51,796	0/0:23,0:23:57.19:0,57,927	1/1:13,23:36:60.21:1457,60,0	1/1:11,21:33:63.22:1524,63,0	1/1:8,21:28:54.19:1311,54,0	1/1:8,20:29:60.66:1407,61,0	0/0:23,0:22:27.09:0,27,439	0/0:21,0:21:51.17:0,51,830	0/0:34,0:34:66.23:0,66,1068	0/0:22,0:22:60.20:0,60,972	1/1:7,17:23:45.15:1092,45,0	1/1:15,25:43:77.86:1888,78,0	0/0:26,0:25:51.17:0,51,827	1/1:10,18:28:54.18:1273,54,0	1/1:14,17:33:57.20:1366,57,0	1/1:9,12:20:33.11:801,33,0
chr10	13316535	.	A	AC	6780.91	PASS	AB=0.611;AC=41;AF=0.732;AN=56;BaseQRankSum=-5.668;DP=625;FS=12.657;HRun=9;HaplotypeScore=78.1474;InbreedingCoeff=0.5056;MQ=83.22;MQ0=0;MQRankSum=-1.418;QD=13.81;ReadPosRankSum=3.766;VQSLOD=3.4314;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:11,1:21:11.06:85,11,0	1/1:5,9:14:33.07:356,33,0	0/0:27,0:26:44.48:0,44,365	0/0:24,0:24:46.87:0,47,378	1/1:5,13:18:6.37:355,6,0	1/1:6,14:20:13.11:372,13,0	1/1:11,26:38:66:703,66,0	0/1:14,12:26:13.41:213,0,13	1/1:6,17:23:4.21:256,4,0	1/1:8,13:21:1.09:234,1,0	1/1:3,11:13:17.97:183,18,0	1/1:12,3:19:25.16:173,25,0	1/1:4,1:21:17.63:93,18,0	1/1:8,1:26:31.37:174,31,0	1/1:9,25:35:56.82:593,57,0	0/1:8,13:21:15.21:266,0,15	0/1:5,19:24:29.85:383,0,30	0/1:2,17:19:4.49:357,0,4	0/0:19,0:20:40.99:0,41,340	0/0:18,0:18:50.99:0,51,442	0/0:43,0:44:99:0,111,946	1/1:5,1:17:19.96:102,20,0	0/1:8,8:16:2.16:189,0,2	1/1:4,31:35:78.16:845,78,0	1/1:3,1:14:8.18:61,8,0	1/1:7,10:17:18.05:199,18,0	1/1:8,14:22:13.04:364,13,0	1/1:2,7:9:21.04:224,21,0
chr10	13318846	.	C	CA	13992.07	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-18.701;DP=761;FS=2.662;HRun=4;HaplotypeScore=68.7739;InbreedingCoeff=0.9988;MQ=82.45;MQ0=0;MQRankSum=-1.397;QD=35.79;ReadPosRankSum=1.903;VQSLOD=5.4676;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:56:99:0,153,1734	1/1:2,11:13:30.10:410,30,0	0/0:18,0:18:51.14:0,51,575	0/0:23,0:23:49.09:0,49,561	1/1:2,17:19:54.14:707,54,0	0/0:18,0:18:51.15:0,51,579	0/0:38,0:38:99:0,105,1181	1/1:5,26:31:78.20:1000,78,0	1/1:1,24:25:69.23:944,69,0	1/1:4,23:27:69.21:913,69,0	1/1:1,15:16:45.11:594,45,0	0/0:24,0:24:63.18:0,63,715	0/0:32,0:32:93.27:0,93,1054	0/0:29,0:29:84.22:0,84,943	1/1:4,36:40:99:1354,99,0	1/1:2,29:31:87.29:1190,87,0	1/1:0,41:41:99:1560,114,0	1/1:1,42:43:99:1560,114,0	0/0:17,0:17:48.11:0,48,527	0/0:22,0:22:60.14:0,60,661	0/0:52,0:52:99:0,147,1657	0/0:17,0:17:45.13:0,45,510	1/1:1,14:15:36.12:493,36,0	1/1:4,42:45:99:1683,123,0	0/0:24,0:24:72.19:0,72,805	1/1:1,23:24:66.21:888,66,0	1/1:2,12:14:33.11:451,33,0	1/1:0,6:6:18.06:246,18,0
chr10	13321647	.	TG	T	1608.71	PASS	AB=0.889;AC=13;AF=0.232;AN=56;BaseQRankSum=5.192;DP=501;FS=13.297;HRun=10;HaplotypeScore=71.8795;InbreedingCoeff=0.7678;MQ=58.38;MQ0=32;MQRankSum=3.298;QD=12.97;ReadPosRankSum=6.522;VQSLOD=1.6811;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,30:37:77.97:675,78,0	0/0:11,0:11:30.01:0,30,312	0/0:42,0:9:6.72:0,7,77	0/0:22,0:5:0:0,0,0	0/0:11,0:11:17.94:0,18,168	0/0:10,0:13:23.31:0,23,160	0/0:8,0:13:13.04:0,13,64	0/0:28,0:28:53.54:0,54,479	0/0:13,1:13:1.25:0,1,224	0/0:16,1:17:4:0,4,245	0/0:12,0:11:21.89:0,22,217	1/1:2,11:13:26.99:234,27,0	1/1:1,4:4:9:78,9,0	1/1:2,16:18:44.99:390,45,0	0/0:7,0:6:15.74:0,16,121	0/0:20,0:19:41.98:0,42,431	0/0:31,0:30:35.25:0,35,631	0/0:25,2:26:8.17:0,8,526	0/0:12,0:10:23.40:0,23,191	0/0:15,0:15:4.19:0,4,196	0/0:15,0:15:17.70:0,18,198	1/1:3,12:12:23.93:200,24,0	0/0:15,0:14:35.93:0,36,361	0/0:10,0:10:9.94:0,10,129	1/1:3,13:15:23.98:208,24,0	0/1:14,2:16:1.17:1,0,264	0/0:26,0:25:56.78:0,57,543	0/0:11,0:9:19.94:0,20,166
chr10	13321898	.	A	ATTT	4740.85	PASS	AB=0.597;AC=34;AF=0.607;AN=56;BaseQRankSum=1.250;DP=471;FS=9.010;HRun=14;HaplotypeScore=82.6861;InbreedingCoeff=0.7537;MQ=68.26;MQ0=2;MQRankSum=-3.185;QD=14.86;ReadPosRankSum=-6.215;VQSLOD=1.1837;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:38.45:0,38,400	1/1:4,0:6:8.97:96,9,0	0/0:9,0:10:11.56:0,12,80	0/0:12,0:12:6.07:0,6,102	1/1:9,8:18:25.29:217,25,0	0/0:20,0:22:14.86:0,15,332	0/0:10,0:14:18.07:0,18,197	1/1:23,8:36:66.54:904,67,0	1/1:9,0:9:12.04:192,12,0	1/1:4,9:14:27.04:370,27,0	1/1:2,3:8:17.50:191,17,0	0/0:15,0:15:20.59:0,21,215	0/0:17,0:18:2.27:0,2,208	0/0:11,0:13:16.30:0,16,174	1/1:8,10:26:32.98:447,33,0	1/1:10,14:24:15.05:257,15,0	1/1:8,9:18:19.59:263,20,0	1/1:8,6:16:5.52:155,6,0	1/1:11,0:22:27.65:152,28,0	0/1:3,0:15:58.76:59,0,64	1/1:6,0:21:12.46:26,12,0	0/0:7,0:9:19.59:0,20,200	1/1:7,1:15:6.86:59,7,0	1/1:2,0:6:6:67,6,0	0/0:11,0:14:28.41:0,28,277	1/1:4,12:23:63.34:804,63,0	0/1:12,11:27:2.55:286,0,3	1/1:1,3:7:15.01:195,15,0
chr10	13324543	.	G	GA	9644.21	PASS	AB=0.643;AC=41;AF=0.732;AN=56;BaseQRankSum=-10.422;DP=496;FS=17.291;HRun=9;HaplotypeScore=44.0413;InbreedingCoeff=0.9001;MQ=77.97;MQ0=0;MQRankSum=-3.293;QD=24.54;ReadPosRankSum=3.214;VQSLOD=3.6654;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,16:18:45.12:496,45,0	1/1:1,6:7:18.05:199,18,0	0/0:14,0:13:28.37:0,28,269	0/0:9,0:9:6.84:0,7,97	1/1:3,22:25:69.18:756,69,0	0/0:12,0:11:29.98:0,30,260	0/0:17,0:17:47.97:0,48,413	1/1:8,20:28:28.07:511,28,0	1/1:4,13:17:36.10:398,36,0	1/1:6,16:22:48.13:530,48,0	1/1:3,14:17:42.11:465,42,0	1/1:0,15:15:39.11:431,39,0	1/1:0,7:7:21.06:232,21,0	1/1:3,19:22:54.15:597,54,0	1/1:1,21:23:36.95:619,37,0	1/1:4,17:21:39.11:431,39,0	1/1:1,21:22:48.13:529,48,0	1/1:2,23:25:66.15:718,66,0	0/0:20,0:20:38.96:0,39,336	0/0:15,0:15:32.95:0,33,283	0/0:16,0:16:38.96:0,39,332	1/1:4,8:12:18.05:194,18,0	1/1:3,11:14:27.96:298,28,0	0/1:4,5:9:8.01:148,0,8	1/1:5,19:24:31.10:571,31,0	1/1:7,18:25:28.07:529,28,0	1/1:8,17:25:28.06:525,28,0	1/1:1,14:15:42.11:465,42,0
chr10	13327418	.	TACACACACACACACACACACACACAC	T	2093.77	PASS	AB=0.855;AC=19;AF=0.365;AN=52;BaseQRankSum=3.256;DP=491;FS=0.000;HRun=0;HaplotypeScore=262.5542;InbreedingCoeff=0.4265;MQ=62.29;MQ0=35;MQRankSum=-1.693;QD=10.85;ReadPosRankSum=0.029;VQSLOD=1.9813;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:29:12.04:0,12,502	./.	0/0:33,0:18:3.01:0,3,83	0/0:28,0:16:6.02:0,6,99	0/1:9,4:12:2.03:2,0,20	0/0:10,0:10:12.03:0,12,461	0/0:23,0:19:25.31:0,25,974	0/1:28,0:27:11.94:131,0,12	1/1:13,0:11:2.98:21,3,0	0/1:17,2:19:11.19:468,0,11	0/1:14,3:18:0:0,0,0	0/0:10,0:17:9.03:0,9,263	0/0:9,0:9:9.03:0,9,299	0/0:21,0:19:18.06:0,18,807	0/0:11,2:14:3:0,3,25	1/1:12,4:17:3.01:37,3,0	1/1:15,1:13:9.03:469,9,0	0/1:8,0:9:11.96:303,0,12	0/0:16,0:17:26.30:0,26,1668	0/0:15,0:14:21.96:0,22,1584	0/0:19,0:17:21.07:0,21,1259	0/0:21,0:20:21.05:0,21,715	./.	1/1:15,0:13:3.01:66,3,0	0/0:14,0:19:9.03:0,9,321	1/1:15,4:18:7.29:389,7,0	1/1:17,0:16:9.01:165,9,0	1/1:5,1:5:3.01:200,3,0
chr10	13331202	.	G	GAA	2984.04	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-11.339;DP=685;FS=8.967;HRun=2;HaplotypeScore=126.1097;InbreedingCoeff=0.9970;MQ=91.24;MQ0=0;MQRankSum=-1.089;QD=48.13;ReadPosRankSum=-0.685;VQSLOD=2.3679;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:87.22:0,87,1212	0/0:11,0:11:33.10:0,33,467	0/0:31,0:31:87.28:0,87,1218	0/0:23,0:23:58.73:0,59,803	0/0:32,0:32:93.28:0,93,1325	0/0:25,0:25:71.90:0,72,1016	0/0:23,0:23:66.22:0,66,967	0/0:37,0:37:99:0,102,1482	0/0:15,0:15:42.14:0,42,618	0/0:22,0:22:66.22:0,66,954	0/0:17,0:17:48.16:0,48,705	0/0:34,0:34:96.27:0,96,1352	0/0:29,0:29:87.28:0,87,1260	0/0:23,0:23:69.22:0,69,996	0/0:33,0:33:96.27:0,96,1336	0/0:25,0:25:69.19:0,69,955	0/0:29,0:29:81.22:0,81,1149	0/0:23,0:23:63.13:0,63,883	1/1:2,12:15:39.12:696,39,0	1/1:2,28:31:87.26:1588,87,0	1/1:0,16:16:45.15:843,45,0	0/0:20,0:20:60.20:0,60,881	0/0:21,0:21:60.20:0,60,883	0/0:23,0:23:69.22:0,69,997	0/0:26,0:26:72.24:0,72,1060	0/0:26,0:26:72.23:0,72,1043	0/0:38,0:37:99:0,108,1559	0/0:6,0:6:18.06:0,18,255
chr10	13331625	.	T	TACCACCAGC	17456.98	PASS	AB=0.625;AC=39;AF=0.696;AN=56;BaseQRankSum=-5.891;DP=706;FS=8.379;HRun=0;HaplotypeScore=176.4535;InbreedingCoeff=0.8494;MQ=74.12;MQ0=2;MQRankSum=-11.990;QD=36.91;ReadPosRankSum=-5.329;VQSLOD=2.6949;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:84.27:0,84,2167	1/1:4,7:11:14.63:646,15,0	0/0:34,0:29:41.87:0,42,725	0/0:38,0:28:48:0,48,913	1/1:9,9:19:3.01:139,3,0	1/1:7,14:22:21.07:942,21,0	1/1:22,18:37:33.11:1146,33,0	1/1:30,0:29:54.13:1415,54,0	1/1:5,16:26:30.10:1269,30,0	1/1:6,9:16:30.10:1007,30,0	1/1:5,7:12:2.75:138,3,0	0/0:37,0:37:96.33:0,96,2637	0/0:22,0:22:57.17:0,57,1449	0/0:43,0:43:99:0,105,2694	0/1:8,10:20:4.33:984,0,4	1/1:8,18:27:48.16:1921,48,0	1/1:13,12:28:30.10:1288,30,0	1/1:5,7:15:12.04:499,12,0	1/1:11,8:18:39.09:961,39,0	1/1:6,9:17:12.04:365,12,0	1/1:28,29:59:15:402,15,0	0/0:10,0:10:24.08:0,24,663	1/1:12,0:12:6.02:119,6,0	1/1:18,14:34:27.56:1083,28,0	0/0:16,0:16:42.13:0,42,1052	1/1:9,18:29:57.32:1854,57,0	1/1:14,10:26:23.90:850,24,0	1/1:8,0:8:17.92:430,18,0
chr10	13331633	.	GCAC	G	513.94	PASS	AB=0.945;AC=13;AF=0.232;AN=56;BaseQRankSum=4.578;DP=686;FS=9.865;HRun=0;HaplotypeScore=147.4556;InbreedingCoeff=-0.2181;MQ=63.88;MQ0=4;MQRankSum=-2.195;QD=1.63;ReadPosRankSum=-0.565;VQSLOD=2.0391;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:90.29:0,90,1849	0/0:11,0:10:5.76:0,6,97	0/0:31,0:23:35.74:0,36,723	0/0:32,0:21:50.96:0,51,784	0/1:15,0:15:0.27:0,0,0	0/0:24,0:24:28.64:0,29,393	0/1:37,0:33:7.22:7,0,256	0/1:20,9:28:99:212,0,622	0/0:26,0:26:32.96:0,33,465	0/1:18,0:18:89.22:89,0,404	0/0:10,0:10:5.94:0,6,48	0/0:39,0:39:99:0,108,2251	0/0:25,0:25:72.22:0,72,1383	0/0:39,0:39:99:0,114,2355	0/1:19,1:20:16.47:16,0,358	0/0:28,0:28:52.66:0,53,732	0/0:29,0:29:8.24:0,8,393	0/0:16,0:16:21.07:0,21,328	0/1:17,0:16:46.02:46,0,345	0/1:13,1:13:12.48:12,0,47	0/1:64,0:63:20.70:21,0,506	0/0:10,0:10:27.09:0,27,559	0/1:10,3:13:53.39:53,0,162	0/1:31,0:31:1.13:1,0,334	0/0:17,0:17:48.15:0,48,938	0/1:26,0:26:99:101,0,417	0/1:22,0:22:1.04:1,0,231	0/1:7,2:9:59.02:92,0,59
chr10	13331648	.	CCAT	C	110.90	PASS	AB=0.903;AC=7;AF=0.125;AN=56;BaseQRankSum=6.815;DP=629;FS=12.294;HRun=0;HaplotypeScore=152.6678;InbreedingCoeff=-0.1599;MQ=53.79;MQ0=4;MQRankSum=-4.665;QD=0.82;ReadPosRankSum=-2.847;VQSLOD=1.3024;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:96.26:0,96,2007	0/0:12,0:11:10.29:0,10,337	0/0:23,0:12:29.23:0,29,558	0/0:34,0:20:34.97:0,35,602	0/0:8,0:8:2.74:0,3,68	0/0:21,0:21:48.57:0,49,956	0/1:26,1:23:1.42:1,0,554	0/1:26,4:29:99:102,0,1135	0/0:25,0:25:45.12:0,45,880	0/1:19,0:19:59.64:60,0,825	0/0:8,0:8:5.90:0,6,98	0/0:37,0:37:99:0,108,2173	0/0:25,0:25:75.21:0,75,1530	0/0:42,0:42:99:0,117,2481	0/1:16,1:17:10.74:11,0,751	0/0:23,0:23:55.47:0,55,1189	0/0:25,0:25:30.49:0,30,997	0/0:18,0:18:39.12:0,39,717	0/0:17,0:16:8.27:0,8,688	0/0:12,0:11:0.13:0,0,91	0/0:50,0:49:19.49:0,19,1187	0/0:12,0:12:33.10:0,33,684	0/1:5,3:8:14.46:14,0,258	0/0:31,0:31:12.57:0,13,755	0/0:18,0:18:54.12:0,54,1067	0/1:26,0:26:6.37:6,0,918	0/0:19,0:19:9.05:0,9,550	0/1:6,2:8:33.66:34,0,353
chr10	13333264	.	T	TGCCTA	43322.77	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-12.814;DP=655;FS=1.203;HRun=0;HaplotypeScore=99.2528;InbreedingCoeff=0.9961;MQ=83.19;MQ0=0;MQRankSum=-12.884;QD=82.05;ReadPosRankSum=6.677;VQSLOD=6.5040;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,17:19:47.98:1588,48,0	1/1:0,6:5:15.05:499,15,0	0/0:24,0:24:69.24:0,69,1537	0/0:22,0:22:63.19:0,63,1392	1/1:1,25:24:51.18:1696,51,0	1/1:3,22:27:60.21:1951,60,0	1/1:3,19:27:54.18:1683,54,0	1/1:5,27:41:99:3433,120,0	1/1:0,24:27:72.25:2376,72,0	1/1:1,29:29:84.29:2788,84,0	1/1:0,13:15:42.14:1380,42,0	1/1:0,23:24:66.23:2198,66,0	1/1:0,22:23:60.21:1994,60,0	1/1:0,26:28:72.25:2390,72,0	1/1:0,27:29:78.27:2589,78,0	1/1:0,21:22:57.20:1896,57,0	1/1:3,24:27:66.23:2195,66,0	1/1:2,12:15:39.13:1284,39,0	0/0:28,0:28:81.28:0,81,1856	0/0:23,0:23:69.22:0,69,1534	0/0:30,0:30:87.28:0,87,1980	1/1:1,11:15:33.11:1085,33,0	1/1:2,14:17:30.10:996,30,0	1/1:0,17:20:42.14:1353,42,0	1/1:0,19:19:54.19:1797,54,0	1/1:6,23:28:81.28:2561,81,0	1/1:2,20:25:69.24:2193,69,0	1/1:0,14:16:42.14:1394,42,0
chr10	13335571	.	A	ATC	85.49	PASS	AC=10;AF=1.00;AN=10;DP=26;FS=0.000;HRun=0;HaplotypeScore=10.9770;MQ=30.24;MQ0=3;QD=9.50;VQSLOD=2.5587;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	1/1:0,2:1:3.01:34,3,0	./.	./.	./.	1/1:3,0:3:3.01:38,3,0	1/1:0,1:1:3:28,3,0	./.	1/1:1,0:1:3:25,3,0	./.	./.	1/1:1,1:2:3:27,3,0	./.	./.
chr10	13336908	.	ACAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGG	A	12948.32	PASS	AB=0.908;AC=40;AF=0.714;AN=56;BaseQRankSum=-0.663;DP=376;FS=3.968;HRun=0;HaplotypeScore=253.7347;InbreedingCoeff=0.4372;MQ=52.46;MQ0=4;MQRankSum=-3.018;QD=41.24;ReadPosRankSum=2.270;VQSLOD=3.7065;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:25:64.42:627,64,0	1/1:0,7:7:8.94:268,9,0	0/0:7,0:4:6.79:0,7,95	0/0:7,0:5:11.92:0,12,128	1/1:13,0:13:36.05:511,36,0	0/1:14,0:14:99:216,0,228	0/1:7,0:6:0.52:79,0,1	1/1:21,0:21:63.05:655,63,0	1/1:8,1:8:21.05:785,21,0	1/1:18,0:18:54.05:1552,54,0	1/1:15,0:15:44.70:1091,45,0	1/1:11,0:11:32.33:394,32,0	1/1:16,0:16:42.45:515,42,0	0/1:11,0:12:99:330,0,165	1/1:20,0:18:48.13:1588,48,0	1/1:17,0:17:45.10:966,45,0	1/1:9,0:9:26.96:460,27,0	1/1:0,11:11:3.01:197,3,0	0/0:16,0:16:44.44:0,44,1473	0/0:19,0:19:49.08:0,49,1353	0/0:13,0:13:39.08:0,39,1615	1/1:13,0:13:21.97:456,22,0	1/1:8,0:8:23.97:422,24,0	0/1:10,0:10:53.79:600,0,54	0/1:15,0:15:6.61:618,0,7	1/1:4,0:4:11.92:159,12,0	1/1:1,25:26:3.49:245,3,0	0/1:1,8:10:99:213,0,244
chr10	13336938	.	AG	A	1674.76	PASS	AB=0.810;AC=18;AF=0.333;AN=54;BaseQRankSum=4.766;DP=402;FS=3.335;HRun=2;HaplotypeScore=104.4729;InbreedingCoeff=-0.1480;MQ=40.98;MQ0=26;MQRankSum=0.034;QD=7.98;ReadPosRankSum=1.705;VQSLOD=1.2870;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:21:26.65:0,27,307	1/1:7,0:7:3.01:39,3,0	1/1:2,0:1:0.89:2,1,0	./.	0/1:14,1:15:92.16:92,0,129	0/0:16,0:15:20.44:0,20,353	0/0:12,0:8:15.52:0,16,206	0/1:9,1:9:39.46:39,0,115	0/1:11,3:12:64.66:133,0,65	0/1:10,9:17:92.63:285,0,93	0/1:4,8:12:20.89:235,0,21	0/0:14,0:14:21.40:0,21,188	0/0:16,0:16:33.13:0,33,281	0/0:14,0:14:21.76:0,22,254	0/1:13,9:20:33.95:389,0,34	0/1:16,4:20:42.99:249,0,43	0/1:8,3:10:84.10:84,0,109	0/0:17,0:17:7.96:0,8,135	0/0:19,0:13:18.36:0,18,300	0/0:12,0:12:15.25:0,15,147	0/0:16,0:12:23.21:0,23,347	0/0:12,0:12:11.92:0,12,123	0/1:5,4:8:48.70:79,0,49	0/1:13,3:14:99:124,0,127	0/0:19,0:17:15.97:0,16,251	0/1:9,1:8:13.55:14,0,64	1/1:31,0:30:3.01:37,3,0	0/1:12,0:12:28.93:29,0,77
chr10	13336942	.	AG	A	1266.16	PASS	AB=0.888;AC=18;AF=0.346;AN=52;BaseQRankSum=8.042;DP=403;FS=3.075;HRun=2;HaplotypeScore=107.0776;InbreedingCoeff=-0.3063;MQ=40.53;MQ0=27;MQRankSum=0.355;QD=5.00;ReadPosRankSum=1.119;VQSLOD=0.7822;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:15,9:21:99:180,0,288	1/1:7,0:7:2.84:14,3,0	./.	./.	0/0:12,0:12:6.52:0,7,328	0/0:17,0:16:5.52:0,6,81	0/0:13,0:8:12.16:0,12,146	0/0:10,0:9:18.93:0,19,285	0/1:14,0:12:14.84:15,0,141	0/1:19,0:17:39.45:39,0,277	0/1:11,0:11:70.72:71,0,80	0/1:8,6:14:96.16:216,0,96	0/1:9,5:14:99:188,0,234	0/1:11,2:13:40.45:40,0,270	0/1:21,0:19:99:108,0,177	0/1:17,0:17:33.90:34,0,132	0/1:11,0:10:3.92:4,0,228	0/0:16,1:17:14.78:0,15,173	0/0:20,0:13:24.38:0,24,379	0/0:14,0:14:20.95:0,21,203	0/0:18,0:14:22.02:0,22,315	0/1:6,6:12:20.88:194,0,21	0/1:10,0:9:39.31:39,0,130	0/1:16,0:14:26.71:27,0,166	0/1:12,7:17:99:226,0,119	0/0:13,0:11:12.96:0,13,297	1/1:31,0:30:2.97:20,3,0	0/0:14,0:14:0.61:0,1,157
chr10	13336946	.	AG	A	606.49	PASS	AB=0.969;AC=16;AF=0.308;AN=52;BaseQRankSum=7.426;DP=403;FS=4.848;HRun=2;HaplotypeScore=107.1992;InbreedingCoeff=-0.2903;MQ=39.55;MQ0=26;MQRankSum=-0.362;QD=2.64;ReadPosRankSum=0.420;VQSLOD=-0.2566;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:23,1:21:34.69:35,0,363	1/1:7,0:7:2.22:7,2,0	./.	./.	0/0:11,0:11:29.13:0,29,387	0/1:11,6:16:16.01:261,0,16	0/1:11,2:8:88.19:88,0,107	0/0:11,0:10:27.05:0,27,352	0/1:15,0:13:0.85:1,0,198	0/1:18,0:16:29.40:29,0,302	0/1:10,0:10:31.08:31,0,168	0/1:13,0:13:54.77:55,0,102	0/1:15,0:15:10:10,0,290	0/1:14,0:14:7.82:8,0,277	0/1:18,0:16:57.14:57,0,236	0/0:15,0:15:21.49:0,21,209	0/0:12,0:11:20.29:0,20,298	0/0:19,0:19:17.03:0,17,220	0/0:21,0:15:27.22:0,27,391	0/0:16,0:16:24.28:0,24,261	0/0:18,0:14:23.18:0,23,329	0/1:11,0:11:22.68:76,0,23	0/1:8,0:7:17.83:18,0,150	0/0:17,0:15:9.09:0,9,231	0/1:16,0:14:66.72:67,0,138	0/0:14,0:12:36.10:0,36,466	0/1:31,0:30:9.92:10,0,71	0/0:17,0:17:13.27:0,13,271
chr10	13336951	.	G	GA	319.25	PASS	AB=0.873;AC=5;AF=0.096;AN=52;BaseQRankSum=0.375;DP=406;FS=2.380;HRun=2;HaplotypeScore=106.4753;InbreedingCoeff=-0.1187;MQ=39.50;MQ0=27;MQRankSum=3.201;QD=4.09;ReadPosRankSum=3.885;VQSLOD=0.8918;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:19:20.10:0,20,449	0/0:7,0:7:2.98:0,3,22	./.	./.	0/0:13,0:13:27.98:0,28,379	0/1:10,5:14:97.84:204,0,98	0/1:11,1:7:29.86:30,0,151	0/0:13,0:12:36.11:0,36,481	0/1:14,3:15:99:107,0,257	0/0:18,0:16:46.99:0,47,495	0/0:9,0:9:21.93:0,22,237	0/0:10,0:10:15.40:0,15,163	0/0:14,0:14:36.81:0,37,402	0/0:14,0:14:27.49:0,27,350	0/0:18,0:16:36.42:0,36,399	0/1:15,1:16:26.32:26,0,211	0/0:16,0:15:32.54:0,33,399	0/0:18,0:18:21.07:0,21,298	0/0:23,0:15:38.82:0,39,458	0/0:18,0:18:32.84:0,33,360	0/0:20,0:16:33.06:0,33,396	0/0:9,0:9:9.93:0,10,89	0/0:6,0:5:15.05:0,15,203	0/0:19,0:17:27.02:0,27,322	0/1:16,2:16:66.76:67,0,205	0/0:14,0:12:36.12:0,36,502	0/0:30,0:29:11.93:0,12,132	0/0:17,0:17:27.06:0,27,357
chr10	13336967	.	GGAAGAAGAAAGAAAGA	G	857.96	PASS	AB=1.000;AC=10;AF=0.192;AN=52;BaseQRankSum=2.408;DP=428;FS=3.474;HRun=0;HaplotypeScore=177.1658;InbreedingCoeff=0.0612;MQ=42.91;MQ0=25;MQRankSum=-1.099;QD=5.43;ReadPosRankSum=-1.026;VQSLOD=2.0225;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:21,0:18:10.99:11,0,511	0/1:8,0:8:5.29:5,0,396	./.	./.	0/0:19,0:19:51.18:0,51,1563	0/1:13,0:12:85.66:86,0,305	0/0:10,0:5:0:0,0,0	0/0:17,0:16:9.03:0,9,133	0/0:16,0:14:17.02:0,17,929	0/0:14,0:12:25.61:0,26,1019	0/0:6,0:6:17.99:0,18,674	0/0:11,0:11:15.05:0,15,323	0/1:13,0:13:72.77:73,0,133	0/0:20,0:20:24:0,24,452	0/0:17,0:15:33.83:0,34,605	0/0:18,0:18:23.90:0,24,416	0/0:17,0:16:17.90:0,18,959	0/0:19,0:19:26.42:0,26,593	0/1:24,0:17:80.23:494,0,80	1/1:9,12:21:11.97:179,12,0	0/1:20,0:16:99:137,0,158	0/1:8,0:8:5.26:5,0,204	0/0:10,0:9:16.61:0,17,362	0/0:19,0:17:15.82:0,16,340	0/0:19,0:17:15.55:0,16,534	0/0:15,0:13:39.13:0,39,1711	0/1:30,0:29:1.94:2,0,624	0/0:23,0:23:25.50:0,26,1787
chr10	13336971	.	GAAGA	G	2116.93	PASS	AB=0.877;AC=23;AF=0.500;AN=46;BaseQRankSum=0.787;DP=440;FS=3.014;HRun=0;HaplotypeScore=100.2074;InbreedingCoeff=0.4566;MQ=43.57;MQ0=24;MQRankSum=-0.824;QD=8.97;ReadPosRankSum=0.435;VQSLOD=2.2893;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:20,1:19:0.81:256,1,0	0/0:9,0:9:12.04:0,12,274	./.	./.	0/0:21,0:22:54.15:0,54,696	0/1:13,0:12:12.58:24,0,13	./.	0/0:18,0:17:3.01:0,3,39	0/0:17,0:15:21.07:0,21,425	0/0:14,0:12:21.07:0,21,447	0/0:7,0:7:18.06:0,18,387	1/1:3,9:12:9.03:138,9,0	1/1:3,0:13:18.03:172,18,0	1/1:3,17:20:18.06:274,18,0	1/1:13,4:15:24.08:368,24,0	1/1:8,10:18:12.04:184,12,0	0/1:15,0:17:19.18:19,0,410	0/1:15,3:19:18.77:210,0,19	0/1:18,0:18:10.18:72,0,10	./.	./.	1/1:8,1:9:12.04:175,12,0	1/1:4,7:10:8.05:136,8,0	0/1:13,7:18:26.68:127,0,27	1/1:10,9:17:9.03:138,9,0	0/0:15,0:13:36.12:0,36,804	0/0:29,0:28:15.04:0,15,321	0/0:21,0:21:39.13:0,39,894
chr10	13336998	.	GA	G	372.75	PASS	AB=0.650;AC=3;AF=0.054;AN=56;BaseQRankSum=5.644;DP=523;FS=2.212;HRun=3;HaplotypeScore=83.6528;InbreedingCoeff=0.5403;MQ=48.32;MQ0=27;MQRankSum=-4.531;QD=14.91;ReadPosRankSum=0.567;VQSLOD=3.1427;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:19:29.13:0,29,276	0/0:10,0:10:18.06:0,18,254	0/0:4,0:2:6:0,6,60	0/0:5,0:2:2.51:0,3,7	0/0:30,0:30:85.74:0,86,1005	0/1:6,7:13:99:186,0,163	1/1:4,8:8:24.07:292,24,0	0/0:22,0:17:48.14:0,48,639	0/0:18,0:16:45.15:0,45,633	0/0:14,0:13:36.12:0,36,509	0/0:14,0:14:42.13:0,42,571	0/0:16,0:16:21.08:0,21,253	0/0:16,0:16:17.35:0,17,244	0/0:25,0:25:27.47:0,27,302	0/0:23,0:22:43.93:0,44,509	0/0:23,0:23:30.99:0,31,379	0/0:27,0:27:54.43:0,54,813	0/0:19,0:19:37.50:0,37,440	0/0:24,0:15:22.49:0,22,358	0/0:15,0:15:15.01:0,15,186	0/0:19,0:17:27.08:0,27,352	0/0:11,0:11:13.54:0,14,106	0/0:14,0:13:22.32:0,22,258	0/0:22,0:20:23.72:0,24,287	0/0:23,0:21:39.14:0,39,501	0/0:20,0:18:52.99:0,53,728	0/0:32,0:31:42.14:0,42,581	0/0:30,0:30:69.23:0,69,971
chr10	13337163	.	T	TC	10867.07	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=-2.961;DP=439;FS=1.841;HRun=1;HaplotypeScore=47.3185;InbreedingCoeff=0.9178;MQ=48.03;MQ0=11;MQRankSum=-4.915;QD=36.84;ReadPosRankSum=0.487;VQSLOD=4.8458;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,26:27:63.14:903,63,0	1/1:0,9:9:24.08:359,24,0	0/0:8,0:5:15.04:0,15,176	0/0:11,0:5:14.93:0,15,150	1/1:0,6:6:18.06:269,18,0	0/0:18,0:18:54.18:0,54,701	0/0:20,0:19:57:0,57,662	1/1:7,25:31:81.20:1161,81,0	1/1:0,14:14:33.11:494,33,0	1/1:1,14:15:42.13:607,42,0	1/1:0,7:7:14.88:169,15,0	1/1:0,12:12:33.11:493,33,0	1/1:0,11:11:30.10:442,30,0	1/1:1,11:12:33.11:487,33,0	1/1:0,14:14:39.13:578,39,0	1/1:1,18:18:45.15:667,45,0	1/1:1,17:18:45.15:668,45,0	1/1:1,16:16:42.10:604,42,0	0/0:24,1:17:3.28:0,3,539	0/0:15,0:15:45.12:0,45,567	0/0:47,0:44:99:0,129,1644	1/1:0,3:3:6.02:90,6,0	1/1:0,7:7:15.05:224,15,0	1/1:1,13:13:27.09:398,27,0	1/1:2,21:23:60.14:871,60,0	1/1:0,12:12:33.11:492,33,0	1/1:0,21:19:54.18:801,54,0	1/1:0,2:2:6.02:90,6,0
chr10	13339574	.	TA	T	6149.57	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=6.979;DP=364;FS=2.768;HRun=10;HaplotypeScore=39.7451;InbreedingCoeff=0.9218;MQ=73.94;MQ0=0;MQRankSum=-0.280;QD=21.81;ReadPosRankSum=1.132;VQSLOD=5.5579;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,21:26:59.97:521,60,0	1/1:0,7:7:21:182,21,0	0/0:8,0:8:6.89:0,7,122	0/0:8,1:8:7.03:0,7,114	1/1:3,11:14:32.98:286,33,0	0/0:14,0:14:42.11:0,42,464	0/0:13,1:14:10.04:0,10,339	1/1:3,33:36:95.93:823,96,0	1/1:2,10:12:29.99:260,30,0	1/1:0,12:12:35.98:308,36,0	1/1:3,7:10:17.98:156,18,0	1/1:0,5:5:12:104,12,0	1/1:5,10:15:29.99:260,30,0	1/1:0,13:13:32.99:287,33,0	1/1:0,10:10:26.71:234,27,0	1/1:0,11:11:32.99:287,33,0	1/1:2,16:18:44.98:390,45,0	1/1:1,9:10:23.99:208,24,0	0/0:18,0:19:53.98:0,54,578	0/0:7,0:7:9.02:0,9,100	0/0:11,0:11:24.06:0,24,266	1/1:0,3:3:9:78,9,0	1/1:0,12:12:35.99:312,36,0	1/1:0,4:4:12:104,12,0	1/1:3,14:17:40.22:362,40,0	1/1:1,21:22:62.97:542,63,0	1/1:2,10:12:26.97:234,27,0	1/1:1,12:13:23.97:208,24,0
chr10	13341968	.	TTTTG	T	2554.83	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=5.641;DP=640;FS=14.961;HRun=0;HaplotypeScore=153.0059;InbreedingCoeff=0.9665;MQ=64.91;MQ0=6;MQRankSum=0.176;QD=25.81;ReadPosRankSum=1.038;VQSLOD=2.9329;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,14:23:16.42:520,16,0	0/0:14,0:14:33.10:0,33,756	0/0:31,0:21:5.64:0,6,322	0/0:29,0:22:19.31:0,19,327	0/0:20,0:20:36.12:0,36,828	0/0:27,0:27:63.21:0,63,1463	0/0:22,0:22:51.17:0,51,1180	0/0:27,0:27:48.12:0,48,952	0/0:26,0:26:60.20:0,60,1347	0/0:27,0:26:66.22:0,66,1481	0/0:29,0:29:51.17:0,51,1210	1/1:6,11:17:33.11:540,33,0	1/1:3,5:8:12.04:197,12,0	1/1:6,16:22:36.12:587,36,0	0/0:19,0:19:33.11:0,33,792	0/0:21,0:21:39.13:0,39,874	0/0:34,0:34:78.27:0,78,1826	0/0:27,0:27:66.20:0,66,1485	0/0:22,0:21:39.13:0,39,840	0/0:31,0:31:81.28:0,81,1913	0/0:17,0:17:36.12:0,36,878	1/1:6,8:14:24.01:358,24,0	0/0:27,0:27:66.22:0,66,1525	0/0:17,0:17:39.13:0,39,890	1/1:3,12:15:33.11:538,33,0	0/0:31,0:31:69.23:0,69,1548	0/0:30,0:30:81.28:0,81,1932	0/0:13,0:13:24.08:0,24,584
chr10	13343104	.	A	AT	6500	PASS	AB=1.000;AC=49;AF=0.875;AN=56;BaseQRankSum=3.990;DP=581;FS=10.442;HRun=9;HaplotypeScore=93.6060;InbreedingCoeff=0.4645;MQ=73.28;MQ0=0;MQRankSum=-2.611;QD=11.61;ReadPosRankSum=6.483;VQSLOD=2.9657;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:41,0:41:30.84:407,31,0	0/1:16,0:16:6.30:101,0,6	0/0:11,0:11:26.99:0,27,234	0/0:10,0:10:22.60:0,23,158	1/1:24,0:24:10.16:230,10,0	1/1:19,0:19:41.52:219,42,0	1/1:15,0:15:30.21:140,30,0	1/1:30,0:30:46.56:281,47,0	1/1:15,0:15:36.26:172,36,0	0/1:16,0:16:12.43:94,0,12	1/1:19,0:19:51.60:240,52,0	1/1:14,0:14:30.66:147,31,0	1/1:28,0:28:47.94:300,48,0	1/1:20,0:20:24.41:187,24,0	1/1:30,0:30:49.30:312,49,0	0/1:22,0:22:45.74:127,0,46	1/1:42,0:42:39.96:433,40,0	1/1:16,0:16:19.23:166,19,0	1/1:6,14:20:44.98:449,45,0	1/1:4,25:29:75.07:777,75,0	1/1:1,9:10:24.06:264,24,0	1/1:15,0:15:25.54:175,26,0	1/1:18,0:18:26.75:224,27,0	1/1:25,0:25:24.46:258,24,0	1/1:20,0:20:2.46:134,2,0	1/1:23,0:23:57.40:257,57,0	1/1:31,0:31:73.56:378,74,0	1/1:2,0:2:5.72:30,6,0
chr10	13343113	.	T	TA	16709.52	PASS	AB=1.000;AC=51;AF=0.911;AN=56;BaseQRankSum=-7.271;DP=608;FS=1.595;HRun=4;HaplotypeScore=62.9597;InbreedingCoeff=0.7191;MQ=74.69;MQ0=0;MQRankSum=-5.913;QD=28.51;ReadPosRankSum=5.900;VQSLOD=4.3166;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,40:43:92.85:1287,93,0	1/1:1,12:13:30.10:392,30,0	0/0:12,0:12:36.06:0,36,378	0/0:10,0:10:22.93:0,23,192	1/1:3,24:27:66.12:825,66,0	1/1:1,19:20:51.17:668,51,0	1/1:0,13:13:33.11:433,33,0	1/1:1,33:34:93.21:1115,93,0	1/1:4,14:18:39.13:511,39,0	1/1:4,16:20:45.09:532,45,0	1/1:1,23:24:66:784,66,0	1/1:0,14:14:33.11:432,33,0	1/1:1,27:28:72.23:943,72,0	1/1:1,19:21:48.16:629,48,0	1/1:2,29:31:75.24:983,75,0	1/1:4,17:21:39.13:511,39,0	1/1:4,39:43:99:1430,111,0	1/1:2,17:19:39.13:511,39,0	0/1:17,0:17:30.86:31,0,38	1/1:28,0:28:8.38:92,8,0	1/1:10,0:10:15.82:47,16,0	1/1:0,15:15:42.14:550,42,0	1/1:0,18:18:45.15:583,45,0	1/1:3,24:27:63.20:825,63,0	1/1:3,19:22:42.14:551,42,0	1/1:0,26:26:78.17:946,78,0	1/1:1,31:32:78.21:1019,78,0	1/1:0,2:2:6.02:79,6,0
chr10	13343718	.	C	CT	12751.14	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-17.448;DP=687;FS=0.000;HRun=5;HaplotypeScore=60.9540;InbreedingCoeff=0.9996;MQ=85.90;MQ0=0;MQRankSum=-2.957;QD=33.91;ReadPosRankSum=0.746;VQSLOD=5.1799;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,132,1419	1/1:1,16:17:48.16:630,48,0	0/0:20,0:20:45.01:0,45,451	0/0:33,0:33:78.15:0,78,816	1/1:2,20:22:60.15:770,60,0	0/0:18,0:18:54.14:0,54,580	0/0:20,0:20:54.14:0,54,580	1/1:2,33:35:99:1266,99,0	1/1:0,9:9:27.09:355,27,0	1/1:3,22:25:63.19:810,63,0	1/1:1,26:27:75.20:967,75,0	0/0:27,0:27:81.20:0,81,871	0/0:26,0:26:78.16:0,78,826	0/0:24,0:24:66.16:0,66,709	1/1:3,22:25:66.21:869,66,0	1/1:2,28:30:72.23:947,72,0	1/1:4,37:41:99:1382,105,0	1/1:2,18:20:51.17:671,51,0	0/0:16,0:16:45.11:0,45,479	0/0:18,0:18:48.11:0,48,507	0/0:22,0:22:51.12:0,51,548	0/0:20,0:20:54.12:0,54,572	1/1:1,22:23:60.20:790,60,0	1/1:2,33:35:25.79:1041,26,0	0/0:20,0:20:57.14:0,57,613	1/1:3,21:24:63.17:795,63,0	1/1:4,29:33:81.26:1063,81,0	1/1:0,10:10:30.10:395,30,0
chr10	13343974	.	GACTGACTAT	G	3660.58	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.767;DP=635;FS=10.020;HRun=0;HaplotypeScore=172.4886;InbreedingCoeff=0.9973;MQ=90.67;MQ0=0;MQRankSum=-10.517;QD=60.01;ReadPosRankSum=0.807;VQSLOD=2.9895;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,120,5555	0/0:12,0:12:36.12:0,36,1744	0/0:32,0:32:84.16:0,84,3202	0/0:24,0:24:60.18:0,60,2618	0/0:33,0:32:99:0,99,4747	1/1:2,26:28:57.20:1710,57,0	1/1:4,29:33:63.22:1951,63,0	0/0:20,0:20:51.17:0,51,2339	0/0:22,0:22:66.23:0,66,3056	0/0:26,0:26:75.24:0,75,3437	0/0:25,0:25:75.26:0,75,3606	0/0:18,0:18:54.19:0,54,2586	0/0:20,0:20:60.21:0,60,2917	0/0:20,0:20:60.21:0,60,2782	0/0:23,0:23:66.23:0,66,3095	0/0:19,0:19:54.19:0,54,2605	0/0:28,0:28:84.29:0,84,3865	0/0:21,0:21:63.17:0,63,2829	0/0:15,0:15:39.10:0,39,1408	0/0:23,0:23:66.23:0,66,3084	0/0:21,0:21:63.22:0,63,2995	0/0:25,0:25:75.26:0,75,3532	0/0:9,0:9:27.08:0,27,1074	0/0:28,0:28:81.28:0,81,3972	0/0:19,0:19:51.17:0,51,2238	0/0:22,0:22:63.22:0,63,2994	0/0:22,0:22:63.22:0,63,3084	0/0:7,0:7:21.07:0,21,842
chr10	13344318	.	GAA	G	1800.73	PASS	AB=0.545;AC=13;AF=0.232;AN=56;BaseQRankSum=3.078;DP=534;FS=16.111;HRun=14;HaplotypeScore=79.3415;InbreedingCoeff=0.8259;MQ=75.19;MQ0=5;MQRankSum=-0.235;QD=16.08;ReadPosRankSum=3.171;VQSLOD=1.1181;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,23:30:57.11:559,57,0	0/0:9,0:12:25.54:0,26,265	0/0:28,0:19:2.80:0,3,190	0/0:28,0:23:13.31:0,13,141	0/0:9,0:11:23.55:0,24,273	0/0:3,0:18:36.06:0,36,344	0/0:7,0:19:43.30:0,43,406	0/0:27,0:31:67.12:0,67,807	0/0:11,0:14:29.05:0,29,323	0/0:23,1:25:26.40:0,26,673	0/0:20,0:21:51.17:0,51,701	1/1:3,9:14:23.57:253,24,0	1/1:4,19:23:14.97:458,15,0	1/1:1,10:11:8.13:253,8,0	0/0:13,0:15:35.08:0,35,421	0/0:15,0:17:44.11:0,44,547	0/0:27,0:27:72.24:0,72,1005	0/0:17,1:18:5.34:0,5,387	0/0:11,0:21:47.59:0,48,494	0/0:7,0:20:41.52:0,42,403	0/0:2,0:10:18.03:0,18,172	1/1:2,8:11:20.67:178,21,0	0/0:15,0:18:41.60:0,42,510	0/0:12,0:13:35.61:0,36,471	1/1:3,12:17:22.32:267,22,0	0/0:19,1:21:28.89:0,29,679	0/0:25,1:28:54.46:0,54,942	0/1:1,1:6:15.43:17,0,15
chr10	13346230	.	CT	C	1633.69	PASS	AB=0.980;AC=30;AF=0.536;AN=56;BaseQRankSum=2.256;DP=454;FS=10.118;HRun=6;HaplotypeScore=55.5259;InbreedingCoeff=0.7753;MQ=53.11;MQ0=38;MQRankSum=0.080;QD=6.56;ReadPosRankSum=2.809;VQSLOD=-0.2649;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:17.95:0,18,146	1/1:10,0:9:14.92:117,15,0	0/0:46,0:2:5.99:0,6,50	0/1:44,2:8:17.43:17,0,24	1/1:15,0:14:20.46:150,20,0	0/0:15,0:15:23.28:0,23,196	0/0:11,0:10:17.82:0,18,146	1/1:21,0:18:35.75:268,36,0	1/1:13,0:13:23.72:182,24,0	1/1:16,0:14:19.14:192,19,0	1/1:3,0:3:2.99:24,3,0	0/0:10,0:10:13.96:0,14,87	0/0:18,0:16:29.68:0,30,211	0/0:13,0:12:15.50:0,16,96	1/1:14,0:14:8.98:75,9,0	1/1:15,0:13:29.82:229,30,0	1/1:13,0:12:5.85:47,6,0	1/1:9,0:9:17.89:134,18,0	0/0:24,0:21:37.78:0,38,321	0/0:20,0:20:41.29:0,41,311	0/0:5,0:5:14.79:0,15,124	0/0:14,0:12:17.70:0,18,133	0/1:10,0:10:0:0,0,0	1/1:10,0:8:2.98:23,3,0	0/0:18,0:18:23.53:0,24,176	1/1:6,7:12:3.83:116,4,0	1/1:21,0:19:26.68:209,27,0	1/1:18,1:15:8.76:58,9,0
chr10	13346235	.	TTAAAA	T	2693.45	PASS	AB=0.962;AC=36;AF=0.643;AN=56;BaseQRankSum=3.742;DP=501;FS=6.454;HRun=0;HaplotypeScore=64.6233;InbreedingCoeff=0.3036;MQ=48.34;MQ0=73;MQRankSum=-0.886;QD=7.63;ReadPosRankSum=2.111;VQSLOD=0.7072;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:16,0:15:60.07:60,0,181	1/1:2,1:9:14.59:228,15,0	0/0:65,0:6:18.04:0,18,287	0/1:58,0:9:14.75:15,0,65	1/1:10,0:11:26.90:239,27,0	0/0:18,0:17:33.04:0,33,532	0/0:8,0:7:17.90:0,18,300	1/1:5,12:12:35.77:299,36,0	1/1:12,0:12:26.89:239,27,0	1/1:6,0:13:21.92:233,22,0	1/1:5,0:5:5.95:57,6,0	0/1:10,0:9:5.59:6,0,54	0/1:18,0:14:29.10:29,0,160	0/1:11,0:9:27.74:28,0,62	1/1:1,9:12:9.03:160,9,0	1/1:12,0:11:29.89:313,30,0	1/1:8,9:13:5.72:112,6,0	1/1:11,0:8:17.22:132,17,0	0/0:30,0:20:60.10:0,60,814	0/0:22,0:22:59.94:0,60,698	0/0:5,0:5:15.01:0,15,227	0/1:11,0:9:54.41:54,0,97	1/1:1,10:10:2.65:31,3,0	1/1:5,0:6:3.01:49,3,0	0/1:16,0:15:22.29:22,0,161	1/1:16,0:11:6.84:145,7,0	1/1:18,0:18:29.50:315,29,0	0/1:14,10:16:22.13:117,0,22
chr10	13347031	.	C	CTGTATGTA	11089.58	PASS	AB=0.709;AC=30;AF=0.556;AN=54;BaseQRankSum=-1.537;DP=838;FS=0.820;HRun=0;HaplotypeScore=235.2977;InbreedingCoeff=0.4884;MQ=62.07;MQ0=11;MQRankSum=-4.502;QD=21.37;ReadPosRankSum=-5.207;VQSLOD=2.7040;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:38:52.33:0,52,870	1/1:6,4:11:12.04:480,12,0	0/0:34,0:19:3.01:0,3,36	./.	1/1:29,14:45:20.97:838,21,0	0/0:12,0:38:69.24:0,69,1271	0/0:12,0:25:26.92:0,27,421	1/1:50,0:50:48.12:948,48,0	0/0:24,0:24:42.14:0,42,1042	1/1:14,0:31:50.88:413,51,0	0/1:12,0:25:41.47:223,0,41	0/0:31,0:33:66.20:0,66,1514	0/0:35,0:35:57.20:0,57,1355	0/0:39,0:39:87.28:0,87,2012	1/1:19,15:36:38.91:1573,39,0	0/1:25,12:38:32.31:1513,0,32	1/1:14,9:24:15.05:610,15,0	0/1:14,0:28:99:279,0,104	0/1:18,0:21:61.28:61,0,62	0/1:15,0:27:44.50:191,0,44	0/1:18,0:43:99:333,0,166	1/1:8,0:19:32.92:268,33,0	1/1:11,0:26:4.16:193,4,0	1/1:5,0:14:20.95:171,21,0	0/0:25,0:25:39.10:0,39,868	1/1:17,10:28:39.13:1462,39,0	1/1:23,14:45:36.12:1459,36,0	1/1:2,0:5:8.98:73,9,0
chr10	13347831	.	C	CA	10682.59	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-1.093;DP=585;FS=2.778;HRun=7;HaplotypeScore=82.4051;InbreedingCoeff=0.9993;MQ=82.50;MQ0=0;MQRankSum=-0.957;QD=31.24;ReadPosRankSum=1.331;VQSLOD=4.9953;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:51.06:0,51,485	1/1:0,9:9:24.07:290,24,0	0/0:19,0:20:43.08:0,43,505	0/0:12,0:12:32.76:0,33,293	1/1:5,30:35:87.22:1035,87,0	0/0:19,0:19:51.08:0,51,492	0/0:15,0:15:42.06:0,42,406	1/1:2,31:33:93.25:1097,93,0	1/1:3,12:15:36.11:435,36,0	1/1:3,21:24:66.20:796,66,0	1/1:2,18:20:51.16:615,51,0	0/0:17,0:17:51.07:0,51,486	0/0:23,0:23:63.01:0,63,590	0/0:13,0:13:39.06:0,39,376	1/1:2,28:30:84.26:1015,84,0	1/1:2,19:21:54.17:652,54,0	1/1:2,22:24:63.19:761,63,0	1/1:4,10:14:27.08:326,27,0	0/0:23,0:23:54.06:0,54,517	0/0:34,0:34:84.13:0,84,811	0/0:11,0:11:27.04:0,27,261	0/0:19,0:19:51.08:0,51,492	1/1:3,17:20:42.13:507,42,0	1/1:1,19:19:54.17:652,54,0	0/0:19,0:19:48.06:0,48,459	1/1:0,34:34:99:1232,102,0	1/1:3,29:32:75.23:906,75,0	1/1:0,11:11:30.09:363,30,0
chr10	13350890	.	GA	G	2183.77	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=9.763;DP=470;FS=4.062;HRun=8;HaplotypeScore=56.3238;InbreedingCoeff=0.9691;MQ=62.44;MQ0=5;MQRankSum=-2.579;QD=21.00;ReadPosRankSum=1.909;VQSLOD=3.9859;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,22:26:62.41:576,62,0	0/0:5,0:5:9.03:0,9,108	0/0:11,1:9:8.72:0,9,198	0/0:18,0:10:27.07:0,27,305	0/0:23,0:23:57.15:0,57,664	0/0:18,0:18:46.77:0,47,552	0/0:23,0:23:59.57:0,60,634	0/0:25,0:25:60.13:0,60,665	0/0:15,0:15:36.10:0,36,423	0/0:10,0:10:30.09:0,30,362	0/0:15,0:15:39.11:0,39,460	1/1:3,11:14:33.05:317,33,0	1/1:2,8:10:27.02:254,27,0	1/1:5,12:17:42.05:400,42,0	0/0:20,0:20:48.12:0,48,556	0/0:21,0:21:54.13:0,54,625	0/0:29,0:29:81.24:0,81,965	0/0:15,0:15:36.09:0,36,420	0/0:21,0:21:54.02:0,54,611	0/0:12,0:12:33.05:0,33,378	0/0:20,0:20:54.14:0,54,637	1/1:3,17:20:47.94:433,48,0	0/0:14,0:14:38.14:0,38,429	0/0:14,0:14:33.10:0,33,398	1/1:4,13:17:42.01:391,42,0	0/0:14,0:14:36.06:0,36,407	0/0:18,0:17:51.16:0,51,613	0/0:4,0:4:12:0,12,120
chr10	13350918	.	AC	A	1514.80	PASS	AB=0.927;AC=20;AF=0.357;AN=56;BaseQRankSum=7.884;DP=418;FS=6.553;HRun=11;HaplotypeScore=64.3731;InbreedingCoeff=0.3279;MQ=68.83;MQ0=3;MQRankSum=-5.819;QD=6.29;ReadPosRankSum=-0.895;VQSLOD=1.3893;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,7:19:26.82:208,27,0	0/0:5,0:5:6.02:0,6,64	0/1:14,0:13:16.47:16,0,73	0/1:12,1:10:16.86:17,0,26	0/0:15,1:16:2.43:0,2,217	0/0:14,1:15:5.41:0,5,245	0/1:20,2:22:7.27:7,0,299	0/1:20,1:22:6.60:7,0,142	0/0:16,0:16:26.35:0,26,280	0/0:11,0:11:5.63:0,6,64	0/1:11,1:12:0.61:1,0,185	1/1:4,12:16:35.90:290,36,0	1/1:7,5:13:25.94:199,26,0	1/1:5,10:16:37.64:294,38,0	0/1:17,3:20:8.86:9,0,219	0/0:15,1:16:11.46:0,11,327	0/0:30,1:31:20.43:0,20,399	0/1:12,1:13:0.61:1,0,184	0/1:12,1:20:45.22:45,0,68	0/0:9,0:9:5.97:0,6,52	0/0:10,0:12:8.99:0,9,80	1/1:8,10:19:40.84:307,41,0	0/0:6,0:6:9.02:0,9,96	0/0:9,0:9:21:0,21,205	1/1:10,9:20:37.92:293,38,0	0/0:12,0:12:14.98:0,15,139	0/0:14,0:14:0.67:0,1,154	0/0:3,0:3:6:0,6,57
chr10	13354210	.	A	ATGGGTC	24453.06	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-11.796;DP=713;FS=0.622;HRun=0;HaplotypeScore=142.0825;InbreedingCoeff=0.9942;MQ=79.27;MQ0=0;MQRankSum=-18.825;QD=70.47;ReadPosRankSum=-0.156;VQSLOD=5.4388;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:87.26:0,87,1876	1/1:5,7:13:24.08:779,24,0	0/0:32,0:32:84.28:0,84,1853	0/0:21,0:21:54.12:0,54,1033	1/1:4,25:30:57.20:1966,57,0	0/0:25,0:25:66.21:0,66,1430	0/0:24,0:24:60.19:0,60,1311	1/1:20,12:37:69.21:2036,69,0	1/1:2,22:24:63.22:2176,63,0	1/1:7,18:27:69.21:2208,69,0	1/1:5,16:22:45.15:1547,45,0	0/0:33,0:33:93.32:0,93,2064	0/0:21,0:21:54.19:0,54,1221	0/0:24,0:24:66.23:0,66,1491	1/1:5,19:24:54.19:1843,54,0	1/1:9,19:28:60.20:1942,60,0	1/1:4,14:18:36.12:1179,36,0	1/1:2,11:13:30.10:1037,30,0	0/0:23,0:23:66.21:0,66,1379	0/0:33,0:33:93.27:0,93,1955	0/0:46,0:46:99:0,135,2965	0/0:27,0:27:72.22:0,72,1545	1/1:6,22:29:66.23:2211,66,0	1/1:5,9:15:17.82:622,18,0	0/0:25,0:25:72.22:0,72,1527	1/1:1,17:20:57.14:1703,57,0	1/1:14,23:39:81.75:2792,82,0	1/1:0,7:7:12.04:415,12,0
chr10	13359384	.	GGTCACTT	G	3408.97	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=7.606;DP=619;FS=1.906;HRun=0;HaplotypeScore=150.3040;InbreedingCoeff=0.9970;MQ=87.09;MQ0=0;MQRankSum=-8.457;QD=65.56;ReadPosRankSum=0.068;VQSLOD=3.6605;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:93.32:0,93,3511	0/0:6,0:6:18.05:0,18,618	0/0:20,0:20:51.16:0,51,1722	0/0:23,0:23:57.19:0,57,1984	0/0:24,0:24:72.23:0,72,2533	0/0:34,0:34:96.33:0,96,3826	0/0:18,0:18:54.19:0,54,2062	0/0:41,0:41:99:0,111,4138	0/0:22,0:22:63.22:0,63,2440	0/0:26,0:26:75.26:0,75,2921	0/0:17,0:17:51.18:0,51,2027	0/0:24,0:24:69.24:0,69,2700	0/0:24,0:24:66.23:0,66,2560	0/0:25,0:25:75.26:0,75,2868	0/0:21,0:21:63.22:0,63,2459	0/0:29,0:29:81.26:0,81,3066	0/0:13,0:13:39.13:0,39,1531	0/0:22,0:22:66.23:0,66,2480	1/1:1,16:17:48.15:1169,48,0	1/1:1,19:20:57.16:1383,57,0	1/1:2,13:15:33.11:857,33,0	0/0:16,0:16:48.16:0,48,1818	0/0:15,0:15:42.13:0,42,1583	0/0:26,0:26:78.27:0,78,2976	0/0:20,0:19:54.19:0,54,2081	0/0:25,0:25:72.25:0,72,2675	0/0:29,0:28:81.28:0,81,3030	0/0:15,0:15:45.15:0,45,1666
chr10	13360750	.	T	TA	2863.60	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-10.135;DP=483;FS=5.808;HRun=8;HaplotypeScore=44.2035;InbreedingCoeff=0.9409;MQ=67.56;MQ0=1;MQRankSum=0.241;QD=28.35;ReadPosRankSum=4.523;VQSLOD=3.8103;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,34:36:87.28:1085,87,0	0/0:4,0:4:9.02:0,9,92	0/0:10,0:8:13.91:0,14,110	0/0:9,0:9:6.48:0,6,61	0/0:27,0:27:75.11:0,75,739	0/0:13,0:13:36.08:0,36,367	0/0:12,0:12:36.08:0,36,367	0/0:33,0:33:84.16:0,84,844	0/0:7,0:7:18.04:0,18,183	0/0:17,0:16:45.10:0,45,458	0/0:16,0:16:45.10:0,45,459	1/1:0,8:8:18.06:226,18,0	1/1:1,14:15:39.12:491,39,0	1/1:0,8:8:14.71:188,15,0	0/0:26,0:26:60.11:0,60,604	0/0:16,0:16:45.08:0,45,452	0/0:34,0:34:93.17:0,93,937	0/0:20,0:20:54.12:0,54,550	0/0:21,0:21:48.10:0,48,489	0/0:16,0:16:42.09:0,42,428	0/0:4,0:4:9.02:0,9,92	1/1:3,4:7:12.04:151,12,0	0/0:15,0:15:33.06:0,33,329	0/0:14,0:13:33.04:0,33,327	1/1:1,26:27:72.23:906,72,0	0/0:26,0:26:72.15:0,72,728	0/0:25,0:24:63.14:0,63,642	0/0:16,0:16:45.10:0,45,459
chr10	13363069	.	TGATG	T	3652.07	PASS	AB=0.931;AC=40;AF=0.800;AN=50;BaseQRankSum=5.333;DP=594;FS=6.384;HRun=0;HaplotypeScore=98.9883;InbreedingCoeff=0.5118;MQ=80.39;MQ0=16;MQRankSum=0.825;QD=9.20;ReadPosRankSum=2.110;VQSLOD=2.2594;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:33,0:40:2.28:27,2,0	1/1:5,4:9:9.03:136,9,0	./.	./.	1/1:12,2:14:3.01:45,3,0	0/1:9,1:10:0.52:40,0,1	1/1:18,4:22:15.05:224,15,0	./.	1/1:11,8:18:3.01:45,3,0	1/1:16,13:29:39.11:568,39,0	1/1:9,2:11:6.02:91,6,0	1/1:14,0:19:18.49:168,18,0	1/1:7,0:14:20.62:178,21,0	1/1:14,0:25:24.01:219,24,0	1/1:19,14:32:18.06:273,18,0	1/1:19,7:26:12.04:182,12,0	0/1:19,1:20:21.56:286,0,22	0/0:15,0:15:15.05:0,15,323	0/0:17,0:17:3.01:0,3,69	0/0:10,0:10:12.04:0,12,278	0/0:35,0:35:36.12:0,36,823	1/1:10,2:12:3.01:45,3,0	1/1:13,11:24:21.07:318,21,0	1/1:9,7:16:9.03:136,9,0	1/1:7,0:10:6.73:33,7,0	1/1:6,7:13:24.08:364,24,0	1/1:17,6:22:12.04:182,12,0	1/1:3,5:8:6.02:91,6,0
chr10	13363130	.	T	TAGGC	1916.06	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=-3.528;DP=580;FS=0.782;HRun=0;HaplotypeScore=114.0546;InbreedingCoeff=0.7901;MQ=58.49;MQ0=14;MQRankSum=1.063;QD=14.97;ReadPosRankSum=-1.258;VQSLOD=3.0697;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:25:12.04:280,12,0	0/0:6,0:6:6.02:0,6,95	0/0:36,0:18:14.88:0,15,212	0/0:36,0:23:24.04:0,24,306	0/0:10,0:10:18.05:0,18,263	0/0:3,0:10:12.48:0,12,112	0/0:12,0:24:16.26:0,16,142	0/0:18,0:17:3.01:0,3,48	0/0:27,0:26:42.14:0,42,667	0/0:17,0:17:3:0,3,26	0/0:9,0:9:15.05:0,15,238	1/1:8,8:17:9.03:214,9,0	1/1:9,8:18:14.89:356,15,0	1/1:24,5:29:39.08:876,39,0	0/0:39,0:38:63.21:0,63,996	0/0:30,0:30:60.19:0,60,930	0/0:24,0:24:54.13:0,54,806	0/0:18,0:18:33.11:0,33,524	0/1:15,0:13:0:0,0,0	0/0:13,0:13:24.08:0,24,379	0/0:45,0:45:60.14:0,60,878	1/1:9,0:8:12.04:286,12,0	0/0:19,0:19:21.07:0,21,333	0/0:19,0:19:35.88:0,36,525	1/1:6,8:15:3.01:72,3,0	0/0:25,0:25:36.11:0,36,551	0/0:19,0:17:36.12:0,36,568	0/0:7,0:7:6.02:0,6,95
chr10	13363388	.	AAAATAAAT	A	1017.72	PASS	AC=16;AF=0.348;AN=46;BaseQRankSum=-1.035;DP=255;FS=2.426;HRun=0;HaplotypeScore=66.9909;InbreedingCoeff=0.5799;MQ=48.57;MQ0=5;MQRankSum=-0.162;QD=12.26;ReadPosRankSum=2.129;VQSLOD=1.7019;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:5,8:14:14.96:334,15,0	0/0:3,0:4:3.01:0,3,104	./.	./.	0/0:3,0:3:3.01:0,3,58	1/1:6,6:12:8.96:117,9,0	0/0:6,0:6:3.01:0,3,42	0/0:22,0:21:18.06:0,18,294	0/0:6,0:7:6.02:0,6,177	0/0:5,0:5:3.01:0,3,43	0/0:7,0:7:5.98:0,6,69	1/1:6,0:6:3.01:37,3,0	1/1:8,1:10:6.02:131,6,0	1/1:6,1:7:6.02:150,6,0	0/0:6,0:10:3.01:0,3,104	0/0:11,0:15:12.04:0,12,339	0/0:15,0:21:15.05:0,15,415	0/0:10,0:15:9.03:0,9,232	1/1:12,0:16:11.99:210,12,0	./.	1/1:7,0:9:3.01:43,3,0	./.	0/0:5,0:8:6.91:0,7,211	./.	1/1:4,4:8:6.02:150,6,0	0/0:6,0:6:3.01:0,3,108	0/0:10,0:10:6.02:0,6,89	0/0:3,0:5:9.03:0,9,313
chr10	13364771	.	C	CAA	1019.56	PASS	AB=0.908;AC=30;AF=0.536;AN=56;BaseQRankSum=6.842;DP=373;FS=32.410;HRun=0;HaplotypeScore=78.6110;InbreedingCoeff=0.1445;MQ=57.28;MQ0=6;MQRankSum=-1.102;QD=3.64;ReadPosRankSum=-2.695;VQSLOD=0.2240;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:16:8.92:99,9,0	0/0:0,0:4:0.47:0,0,1	0/0:15,0:12:0.77:0,1,215	0/0:6,0:4:10.69:0,11,87	1/1:19,0:21:4.59:117,5,0	1/1:1,5:8:10.06:129,10,0	0/1:10,7:20:10.82:118,0,11	0/1:17,0:13:5.91:6,0,31	1/1:9,0:9:3.71:64,4,0	1/1:17,0:17:2.03:72,2,0	0/1:10,0:10:0.35:24,0,0	1/1:8,0:8:2.59:42,3,0	0/1:12,0:12:1.93:35,0,2	0/1:11,0:12:3.99:37,0,4	0/1:8,0:10:4.16:35,0,4	1/1:6,0:9:7.76:115,8,0	0/1:14,0:14:1.96:38,0,2	0/1:9,0:10:3.05:31,0,3	0/0:19,0:18:49.68:0,50,628	0/0:23,0:21:51.57:0,52,680	0/0:18,0:18:48.09:0,48,626	0/0:8,0:8:5.26:0,5,13	0/1:9,0:9:4.80:5,0,5	0/1:6,0:7:2.68:4,0,3	1/1:9,0:12:4.54:95,5,0	0/1:19,0:22:4.31:58,0,4	0/1:18,0:18:14.41:31,0,14	1/1:11,0:11:1.94:14,2,0
chr10	13364772	.	C	CA	2309.82	PASS	AB=0.762;AC=51;AF=0.911;AN=56;BaseQRankSum=2.541;DP=458;FS=0.000;HRun=13;HaplotypeScore=132.6696;InbreedingCoeff=0.2752;MQ=54.26;MQ0=6;MQRankSum=-4.971;QD=5.11;ReadPosRankSum=0.181;VQSLOD=1.8723;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:19:20.89:95,21,0	1/1:4,0:4:0.47:1,0,0	0/1:16,0:13:2.27:2,0,44	0/0:6,0:4:1.87:0,2,24	1/1:28,0:28:32.43:152,32,0	1/1:11,0:11:17.34:103,17,0	1/1:20,0:20:6.64:79,7,0	1/1:25,0:21:14.28:75,14,0	1/1:13,0:11:10.86:54,11,0	1/1:25,0:24:25.61:130,26,0	1/1:14,0:14:10.54:39,11,0	1/1:8,0:8:5.74:31,6,0	1/1:20,0:19:27.55:147,28,0	1/1:18,0:18:17.04:87,17,0	1/1:11,0:11:9.41:46,9,0	1/1:13,0:13:18.14:97,18,0	1/1:17,0:16:11.56:67,12,0	1/1:16,0:15:15.04:68,15,0	0/1:7,11:17:8.38:189,0,8	1/1:6,15:21:6.72:328,7,0	0/1:9,9:18:0.59:161,0,1	1/1:10,0:10:1.77:5,2,0	1/1:12,0:12:4.82:19,5,0	1/1:8,0:8:3.43:20,3,0	1/1:15,0:15:24.01:119,24,0	1/1:31,0:28:28.31:156,28,0	1/1:24,0:24:25.97:125,26,0	1/1:13,0:12:5.53:23,6,0
chr10	13365748	.	AGTGTGTGTGTGT	A	3863.08	PASS	AB=0.900;AC=34;AF=0.680;AN=50;BaseQRankSum=4.822;DP=553;FS=5.797;HRun=0;HaplotypeScore=182.3364;InbreedingCoeff=0.3992;MQ=53.48;MQ0=30;MQRankSum=-3.173;QD=11.33;ReadPosRankSum=1.974;VQSLOD=2.3734;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:28,1:32:8.65:191,9,0	1/1:3,3:6:9.03:307,9,0	./.	./.	1/1:19,3:21:12.04:300,12,0	0/0:13,0:18:6.02:0,6,170	0/0:19,0:23:6.02:0,6,138	0/1:24,0:20:0:0,0,0	0/1:14,6:16:20.63:466,0,21	1/1:17,1:19:10.62:265,11,0	./.	1/1:11,0:13:6.49:108,6,0	1/1:14,2:15:2.75:102,3,0	1/1:14,1:17:6.02:154,6,0	1/1:12,1:14:9.92:243,10,0	1/1:9,1:12:6.02:186,6,0	1/1:23,5:29:15.51:495,16,0	0/1:13,0:12:10.77:19,0,11	0/0:20,0:17:10.75:0,11,507	0/0:13,0:12:3.01:0,3,144	0/0:39,0:37:24.51:0,25,869	0/0:13,0:16:0:0,0,0	1/1:15,1:15:4.25:30,4,0	0/1:19,4:22:83.83:98,0,84	1/1:14,0:19:9.49:137,9,0	1/1:15,4:19:9.03:307,9,0	1/1:6,1:12:9.03:251,9,0	1/1:10,2:11:6.02:205,6,0
chr10	13365800	.	T	TGC	3905.38	PASS	AB=0.996;AC=45;AF=0.804;AN=56;BaseQRankSum=-2.426;DP=492;FS=2.845;HRun=0;HaplotypeScore=131.2046;InbreedingCoeff=0.1116;MQ=54.66;MQ0=24;MQRankSum=2.307;QD=8.34;ReadPosRankSum=1.637;VQSLOD=3.2190;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:31,0:29:26.83:175,27,0	0/1:8,0:8:8.78:42,0,9	0/0:8,0:5:2.55:0,3,38	0/0:16,0:6:6.86:0,7,55	1/1:24,0:24:26.53:180,27,0	1/1:15,0:14:22.43:136,22,0	1/1:35,0:31:39.68:354,40,0	1/1:16,0:16:22.43:192,22,0	0/1:19,0:18:6.10:55,0,6	1/1:23,0:22:2.27:208,2,0	1/1:9,0:9:17.87:130,18,0	1/1:17,0:17:30.26:207,30,0	1/1:11,0:10:20.87:132,21,0	1/1:24,0:23:40.10:293,40,0	0/1:10,0:9:12.12:12,0,17	1/1:6,0:6:6.35:29,6,0	1/1:35,0:34:36.93:327,37,0	1/1:17,0:17:28.83:247,29,0	0/1:11,0:10:42.97:69,0,43	1/1:4,7:12:3.01:49,3,0	0/1:34,1:30:73.24:158,0,73	1/1:10,0:10:14.76:108,15,0	0/1:18,0:18:9.60:157,0,10	1/1:20,0:17:22.08:158,22,0	1/1:11,0:11:14.37:93,14,0	1/1:25,0:25:31.12:277,31,0	0/1:17,0:13:1.82:71,0,2	1/1:9,0:8:9.75:47,10,0
chr10	13368367	.	G	GT	16376.87	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=14.125;DP=635;FS=16.032;HRun=4;HaplotypeScore=171.0945;InbreedingCoeff=0.9997;MQ=76.36;MQ0=0;MQRankSum=-6.602;QD=35.52;ReadPosRankSum=3.855;VQSLOD=2.3898;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,29:30:86.99:1078,87,0	1/1:3,10:13:27.09:369,27,0	0/0:18,0:18:52.70:0,53,578	0/0:15,0:15:41.15:0,41,442	1/1:3,24:27:69.14:916,69,0	0/0:28,0:28:78.20:0,78,872	0/0:31,0:31:93.25:0,93,1045	1/1:4,21:25:66.17:864,66,0	1/1:1,25:26:75.25:1025,75,0	1/1:1,32:33:96.28:1262,96,0	1/1:1,19:20:59.87:705,60,0	1/1:0,17:17:51.10:674,51,0	1/1:2,23:26:60.20:820,60,0	1/1:2,10:12:36.12:491,36,0	1/1:2,24:26:69.23:940,69,0	1/1:0,17:17:51.17:696,51,0	1/1:3,26:29:72.24:984,72,0	1/1:4,13:17:45.11:591,45,0	0/0:26,0:26:78.22:0,78,884	0/0:25,0:25:68.37:0,68,735	0/0:31,0:31:81.21:0,81,908	1/1:1,16:17:38.96:483,39,0	1/1:0,19:20:48.09:630,48,0	1/1:0,21:21:57.19:780,57,0	1/1:2,15:17:45.15:614,45,0	1/1:2,24:26:75.25:1023,75,0	1/1:2,26:28:72.24:979,72,0	1/1:2,12:14:33.11:451,33,0
chr10	13368382	.	A	AG	11381.71	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=19.273;DP=603;FS=12.341;HRun=0;HaplotypeScore=190.6554;InbreedingCoeff=0.9996;MQ=79.72;MQ0=0;MQRankSum=-7.708;QD=27.10;ReadPosRankSum=4.230;VQSLOD=3.0300;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,26:27:74.18:694,74,0	1/1:3,9:12:35.76:369,36,0	0/0:19,0:19:57.18:0,57,772	0/0:19,0:19:51.13:0,51,679	1/1:2,26:28:70.03:606,70,0	0/0:31,0:31:90.29:0,90,1241	0/0:28,0:28:84.25:0,84,1139	1/1:0,25:25:71.50:523,72,0	1/1:5,20:25:74.30:754,74,0	1/1:2,28:30:89.22:988,89,0	1/1:0,18:18:49.54:412,50,0	1/1:3,14:17:50.46:496,50,0	1/1:0,18:18:53.25:514,53,0	1/1:2,13:15:44.13:399,44,0	1/1:5,24:29:83.02:832,83,0	1/1:2,14:16:47.09:396,47,0	1/1:2,18:20:56.88:627,57,0	1/1:1,16:17:50.78:476,51,0	0/0:30,0:30:90.30:0,90,1259	0/0:28,0:28:84.28:0,84,1173	0/0:28,0:28:84.28:0,84,1175	1/1:3,14:17:46.68:380,47,0	1/1:5,16:21:59.46:603,59,0	1/1:3,14:17:47.73:512,48,0	1/1:0,14:14:41.02:333,41,0	1/1:6,19:25:70.92:782,71,0	1/1:2,19:21:61.39:469,61,0	1/1:0,8:8:23.89:219,24,0
chr10	13368385	.	AC	A	7720.53	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=18.773;DP=608;FS=8.911;HRun=2;HaplotypeScore=203.0807;InbreedingCoeff=0.9984;MQ=80.15;MQ0=0;MQRankSum=-8.244;QD=18.21;ReadPosRankSum=4.274;VQSLOD=4.0518;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,26:27:66.96:475,67,0	1/1:4,9:13:37.08:311,37,0	0/0:19,0:19:57.17:0,57,831	0/0:20,0:20:57.13:0,57,768	1/1:3,25:28:54.16:358,54,0	0/0:32,0:32:96.31:0,96,1400	0/0:28,0:28:84.22:0,84,1177	1/1:2,25:27:72.52:373,73,0	1/1:5,20:25:67.30:517,67,0	1/1:3,28:31:82.91:717,83,0	1/1:1,18:19:41.20:278,41,0	1/1:3,14:17:46.11:363,46,0	1/1:1,18:19:50.29:375,50,0	1/1:2,13:15:36.83:251,37,0	1/1:4,24:28:72.14:545,72,0	1/1:2,14:16:39.04:240,39,0	1/1:2,18:20:54.29:435,54,0	1/1:1,16:17:48.14:323,48,0	0/0:29,0:29:87.28:0,87,1284	0/0:29,0:29:87.28:0,87,1284	0/0:27,0:27:78.25:0,78,1144	1/1:5,14:19:38.49:257,38,0	1/1:5,16:21:53.67:410,54,0	1/1:1,14:15:39.90:346,40,0	1/1:1,14:15:37.07:231,37,0	1/1:3,19:22:58.41:529,58,0	1/1:3,19:22:46.63:299,47,0	1/1:0,8:8:18.08:88,18,0
chr10	13368726	.	GAGACGGCAAGCCGACTGCTT	G	10452.68	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=12.592;DP=620;FS=3.687;HRun=0;HaplotypeScore=359.2759;InbreedingCoeff=0.9922;MQ=75.47;MQ0=0;MQRankSum=-12.556;QD=135.75;ReadPosRankSum=6.422;VQSLOD=4.0301;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,18:19:36.08:1939,36,0	0/0:8,0:8:24.08:0,24,2094	0/0:26,0:23:68.90:0,69,2859	0/0:31,0:28:84.23:0,84,5068	0/0:19,0:19:54.08:0,54,3992	0/0:27,0:27:81.28:0,81,7145	0/0:25,0:25:75.24:0,75,5931	0/0:35,0:35:99:0,100,6925	0/0:28,0:28:84.27:0,84,7376	0/0:19,0:19:57.16:0,57,4078	0/0:18,0:18:51.17:0,51,4032	1/1:0,12:12:33.11:1911,33,0	1/1:0,14:14:39.13:2131,39,0	1/1:2,14:16:48.16:2772,48,0	0/0:44,0:44:99:0,132,11382	0/0:27,0:27:81.28:0,81,6936	0/0:20,0:20:57.17:0,57,4806	0/0:22,0:22:66.21:0,66,5822	0/0:24,0:24:72.22:0,72,4162	0/0:11,0:11:30.56:0,31,2215	0/0:61,0:61:99:0,178,14302	1/1:0,8:8:12.04:585,12,0	0/0:10,0:10:30.10:0,30,2146	0/0:27,0:27:81.26:0,81,6714	1/1:0,8:8:21.07:1115,21,0	0/0:18,0:18:51.18:0,51,4670	0/0:24,0:24:72.23:0,72,5479	0/0:19,0:19:57.20:0,57,4803
chr10	13369470	.	CGCAA	C	13267.01	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=13.927;DP=625;FS=4.603;HRun=0;HaplotypeScore=120.8625;InbreedingCoeff=0.9832;MQ=83.70;MQ0=1;MQRankSum=-6.025;QD=43.22;ReadPosRankSum=3.254;VQSLOD=5.4913;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:96.32:0,96,2532	1/1:1,17:18:45.15:854,45,0	0/0:23,0:23:65.84:0,66,1442	0/0:24,0:24:66.18:0,66,1448	1/1:4,28:32:57.11:984,57,0	0/0:33,0:33:99:0,99,2489	0/0:21,0:21:63.21:0,63,1615	1/1:0,27:27:78.24:1408,78,0	1/1:1,20:21:42.14:796,42,0	1/1:2,24:26:72.10:1242,72,0	1/1:1,13:15:30.10:569,30,0	0/0:21,0:21:60.20:0,60,1550	0/0:23,0:23:69.22:0,69,1784	0/0:19,0:19:54.19:0,54,1457	1/1:0,21:21:57.15:1044,57,0	1/1:1,19:20:48.16:911,48,0	1/1:1,26:27:69.24:1310,69,0	1/1:1,2:3:6.02:114,6,0	0/0:25,0:25:69.23:0,69,1753	0/0:21,0:21:60.21:0,60,1618	0/0:36,0:36:99:0,108,2913	0/0:13,0:13:39.12:0,39,991	1/1:1,18:18:26.82:512,27,0	1/1:0,21:21:48.16:863,48,0	0/0:26,0:26:78.25:0,78,1996	1/1:0,31:31:90.26:1580,90,0	1/1:0,19:19:42.14:797,42,0	1/1:0,7:7:15.05:284,15,0
chr10	13369660	.	GTATTTATT	G	11485.72	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=14.054;DP=466;FS=5.100;HRun=0;HaplotypeScore=123.8758;InbreedingCoeff=0.9609;MQ=62.44;MQ0=0;MQRankSum=-11.539;QD=45.76;ReadPosRankSum=-0.785;VQSLOD=4.0512;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,111,4594	1/1:2,9:11:21.07:553,21,0	0/0:10,0:8:15.05:0,15,510	0/0:10,0:10:15.02:0,15,367	1/1:3,17:20:45.03:1039,45,0	0/0:20,0:20:45.15:0,45,1870	0/0:8,0:8:12.04:0,12,510	1/1:8,12:20:36.04:683,36,0	1/1:3,16:19:39.13:1029,39,0	1/1:1,16:17:48.09:1067,48,0	1/1:3,18:21:42.14:1111,42,0	0/0:13,0:13:36.12:0,36,1407	0/0:15,0:15:39.13:0,39,1575	0/0:14,0:14:30.10:0,30,1216	1/1:6,9:15:27.09:711,27,0	1/1:2,13:15:27.09:712,27,0	1/1:10,11:21:21.07:555,21,0	1/1:3,12:15:21.07:555,21,0	0/0:18,0:18:30.10:0,30,1174	0/0:18,0:18:45.13:0,45,1594	0/0:7,0:7:12.04:0,12,510	0/0:5,0:5:6.02:0,6,173	1/1:4,12:16:24:631,24,0	1/1:5,13:18:8.84:234,9,0	0/0:32,0:32:81.28:0,81,3208	1/1:5,17:22:51.16:1256,51,0	1/1:1,14:15:33.11:873,33,0	1/1:0,6:6:18.06:476,18,0
chr10	13371323	.	GCA	G	4362.22	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=1.507;DP=507;FS=10.744;HRun=0;HaplotypeScore=112.2443;InbreedingCoeff=0.8643;MQ=52.61;MQ0=16;MQRankSum=-0.240;QD=19.65;ReadPosRankSum=1.893;VQSLOD=4.7604;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:44:80.79:0,81,796	1/1:4,3:7:12.03:135,12,0	0/0:34,0:2:6:0,6,64	0/0:27,0:6:5.69:0,6,57	1/1:6,9:15:27.07:321,27,0	0/0:6,0:19:39:0,39,359	0/0:8,0:20:35.05:0,35,328	1/1:14,7:23:35.46:294,35,0	1/1:5,10:15:39.02:423,39,0	1/1:3,6:9:17.97:174,18,0	1/1:5,5:10:6.02:72,6,0	0/0:10,0:17:50.98:0,51,507	0/0:12,0:20:42.03:0,42,437	0/0:17,0:22:48.47:0,48,487	1/1:6,11:16:30.09:357,30,0	1/1:6,10:16:32.96:335,33,0	1/1:9,14:22:54.12:617,54,0	1/1:5,10:15:19.02:387,19,0	0/0:9,0:9:12.03:0,12,159	0/0:12,1:13:3.20:0,3,505	0/0:27,2:28:0.28:0,0,951	0/0:7,0:12:17.12:0,17,182	1/1:4,6:10:11.99:127,12,0	1/1:14,15:29:41.91:501,42,0	0/0:10,0:19:33.62:0,34,338	1/1:5,10:15:33.09:382,33,0	1/1:7,4:11:15.04:171,15,0	1/1:3,2:5:6.02:67,6,0
chr10	13371346	.	A	AT	9313.55	PASS	AB=0.591;AC=40;AF=0.714;AN=56;BaseQRankSum=0.713;DP=593;FS=4.742;HRun=10;HaplotypeScore=116.6731;InbreedingCoeff=0.8256;MQ=58.75;MQ0=13;MQRankSum=-1.308;QD=21.22;ReadPosRankSum=-1.384;VQSLOD=3.8270;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:9,38:48:74.60:965,75,0	1/1:1,6:7:21.03:208,21,0	0/0:30,0:8:20.76:0,21,170	0/0:23,0:9:14.95:0,15,117	1/1:6,11:17:12.41:308,12,0	0/0:24,0:24:56.91:0,57,467	0/0:18,0:18:38.93:0,39,320	1/1:8,25:32:57.13:598,57,0	1/1:7,16:23:57.52:576,58,0	1/1:1,10:12:29.66:305,30,0	0/1:4,6:11:10.05:75,0,10	1/1:9,15:24:51.05:522,51,0	1/1:8,14:22:48.60:530,49,0	1/1:10,15:26:47.21:464,47,0	1/1:5,22:25:58.37:601,58,0	1/1:5,13:18:43.81:436,44,0	1/1:7,25:31:75.18:788,75,0	1/1:7,14:21:47.99:492,48,0	0/0:13,0:13:32.93:0,33,265	0/0:15,0:15:38.94:0,39,318	0/0:31,0:31:56.87:0,57,465	1/1:5,5:10:9.91:98,10,0	0/1:3,9:12:6.60:141,0,7	1/1:8,22:31:56.96:580,57,0	1/1:9,17:26:63.03:653,63,0	1/1:3,15:19:48.12:510,48,0	1/1:5,9:14:34.30:338,34,0	1/1:2,4:6:12.03:128,12,0
chr10	13372478	.	C	CA	2563.55	PASS	AB=0.920;AC=16;AF=0.286;AN=56;BaseQRankSum=-1.140;DP=649;FS=12.918;HRun=11;HaplotypeScore=81.9061;InbreedingCoeff=0.6168;MQ=67.14;MQ0=3;MQRankSum=0.212;QD=10.42;ReadPosRankSum=-0.751;VQSLOD=1.2777;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,31:33:71.98:715,72,0	0/0:11,0:11:29.88:0,30,232	0/1:39,0:20:22.87:23,0,81	0/0:28,0:14:5.73:0,6,37	0/0:24,0:26:62.62:0,63,478	0/1:14,2:16:19.06:19,0,235	0/0:20,0:20:53.79:0,54,418	0/0:18,0:18:13.27:0,13,232	0/0:20,0:20:59.77:0,60,463	0/0:26,1:28:43.30:0,43,508	0/0:30,0:31:68.44:0,68,521	1/1:2,23:26:42.08:425,42,0	1/1:2,17:20:12.67:295,13,0	1/1:2,13:16:3.65:204,4,0	0/0:25,0:25:32.31:0,32,433	0/0:12,0:13:31.89:0,32,238	0/0:22,0:22:22.96:0,23,381	0/1:22,4:26:53.04:53,0,367	0/0:21,0:22:31.21:0,31,308	0/0:27,1:29:49.09:0,49,541	0/0:14,1:15:8.41:0,8,248	1/1:4,19:25:19.32:528,19,0	0/1:22,2:24:1.13:1,0,355	0/0:24,0:24:65.70:0,66,505	1/1:0,19:21:50.77:484,51,0	0/0:29,2:30:52.23:0,52,610	0/0:28,1:29:46.98:0,47,538	0/0:11,0:11:20.84:0,21,157
chr10	13372630	.	CA	C	8987.72	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=14.382;DP=705;FS=3.857;HRun=8;HaplotypeScore=70.3544;InbreedingCoeff=0.9878;MQ=68.84;MQ0=0;MQRankSum=-0.664;QD=24.42;ReadPosRankSum=0.347;VQSLOD=5.6413;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:90.62:0,91,1027	1/1:3,3:6:12.01:115,12,0	0/0:24,0:21:10.58:0,11,383	0/0:23,0:21:36.98:0,37,407	1/1:2,17:19:54.05:513,54,0	0/0:25,0:25:66.20:0,66,793	0/0:25,0:25:61.97:0,62,706	1/1:4,31:35:90.10:862,90,0	1/1:2,27:29:75.12:724,75,0	1/1:1,25:26:75.12:724,75,0	1/1:2,16:18:48.08:463,48,0	0/0:27,1:28:52.50:0,53,889	0/0:24,0:24:66.20:0,66,796	0/0:18,0:18:54.17:0,54,651	1/1:2,37:39:99:985,102,0	1/1:1,15:16:39.06:377,39,0	1/1:4,21:25:60.09:579,60,0	1/1:6,33:39:90.14:869,90,0	0/0:23,0:25:60.02:0,60,679	0/0:26,0:26:54.68:0,55,783	0/0:38,0:39:99:0,99,1174	0/0:18,0:18:54.17:0,54,652	1/1:5,15:20:41.89:405,42,0	1/1:1,31:32:78.13:753,78,0	0/0:27,0:27:69.21:0,69,834	1/1:2,25:27:75.58:720,76,0	1/1:2,30:32:78.13:753,78,0	1/1:0,5:5:15.02:145,15,0
chr10	13373115	.	T	TCC	4670.36	PASS	AB=0.571;AC=39;AF=0.722;AN=54;BaseQRankSum=3.428;DP=343;FS=43.116;HRun=7;HaplotypeScore=69.9703;InbreedingCoeff=0.8524;MQ=76.44;MQ0=0;MQRankSum=-8.474;QD=21.13;ReadPosRankSum=3.764;VQSLOD=0.8907;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,23:34:54.18:854,54,0	1/1:1,0:4:6.01:58,6,0	0/0:26,0:24:39.35:0,39,464	0/0:16,0:16:36.09:0,36,399	1/1:2,0:9:12.02:116,12,0	0/0:18,0:18:48.09:0,48,542	0/0:23,0:23:66.20:0,66,768	1/1:5,0:13:20.18:163,20,0	1/1:0,0:8:24.02:223,24,0	0/1:1,0:4:0:0,0,0	1/1:1,0:7:6.01:58,6,0	1/1:1,16:17:42.14:667,42,0	1/1:2,7:9:20.56:302,21,0	1/1:1,11:13:29.88:461,30,0	1/1:3,0:10:18.03:174,18,0	1/1:2,1:11:27.04:277,27,0	1/1:5,0:22:27.42:252,27,0	1/1:4,2:7:14.84:160,15,0	0/0:16,0:16:45.12:0,45,513	0/0:10,0:10:18.05:0,18,209	0/0:9,0:9:21.06:0,21,244	1/1:2,5:7:6.02:85,6,0	1/1:1,0:3:5.99:52,6,0	1/1:4,0:5:3:29,3,0	1/1:3,10:14:18.06:295,18,0	./.	1/1:5,1:16:29.71:298,30,0	1/1:1,0:6:15.02:145,15,0
chr10	13373403	.	TA	T	6225.61	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=4.854;DP=410;FS=0.000;HRun=7;HaplotypeScore=63.1884;InbreedingCoeff=0.9365;MQ=65.08;MQ0=1;MQRankSum=0.011;QD=26.83;ReadPosRankSum=2.657;VQSLOD=5.5028;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:90.18:0,90,1093	1/1:0,6:6:15.03:153,15,0	0/0:11,0:11:21.06:0,21,245	0/0:5,0:5:6.72:0,7,106	1/1:1,16:17:45.10:459,45,0	0/0:29,0:29:78.21:0,78,959	0/0:6,0:6:18.06:0,18,226	1/1:2,26:28:78.18:795,78,0	1/1:1,11:12:30.07:306,30,0	1/1:0,14:14:42.10:428,42,0	1/1:1,12:13:36.08:367,36,0	0/0:14,0:14:30.06:0,30,361	0/0:5,0:5:12.04:0,12,144	0/0:13,0:13:33.10:0,33,404	1/1:1,16:17:41.91:427,42,0	1/1:3,12:15:36.02:354,36,0	1/1:1,26:27:69.15:704,69,0	1/1:1,17:18:42.09:428,42,0	0/0:16,0:15:45.14:0,45,553	0/0:16,0:16:39.12:0,39,491	0/0:5,0:5:12.04:0,12,151	0/0:3,0:3:9.03:0,9,113	1/1:0,4:4:12.03:122,12,0	1/1:1,5:6:15.03:153,15,0	0/0:18,0:18:54.16:0,54,667	1/1:1,22:23:66.15:673,66,0	1/1:2,29:31:81.18:826,81,0	1/1:0,1:1:3.01:31,3,0
chr10	13374488	.	CT	C	6101.68	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=14.809;DP=643;FS=0.676;HRun=11;HaplotypeScore=86.1385;InbreedingCoeff=0.9501;MQ=67.22;MQ0=3;MQRankSum=0.466;QD=17.19;ReadPosRankSum=2.548;VQSLOD=5.6670;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:45:82.71:0,83,1116	1/1:3,8:11:26.56:207,27,0	0/0:14,1:9:11.94:0,12,105	0/0:14,0:10:9.44:0,9,138	1/1:0,21:22:61.96:498,62,0	0/0:23,0:23:54.08:0,54,543	0/0:21,0:21:48.06:0,48,498	1/1:8,18:27:47.89:390,48,0	1/1:3,22:24:53.89:443,54,0	1/1:7,14:21:55.96:446,56,0	1/1:4,22:27:3.97:434,4,0	0/0:21,1:22:32.33:0,32,534	0/0:15,0:15:39.07:0,39,405	0/0:13,0:13:36.07:0,36,372	1/1:6,24:30:56.91:468,57,0	1/1:3,15:18:26.96:222,27,0	1/1:5,29:34:48.91:608,49,0	1/1:1,9:10:20.97:172,21,0	0/0:19,0:18:48.07:0,48,488	0/0:34,0:34:62.70:0,63,864	0/0:13,1:14:11.45:0,11,327	0/0:21,0:21:54.09:0,54,556	1/1:6,24:30:50.60:418,51,0	1/1:1,26:27:65.92:542,66,0	0/0:32,0:32:80.10:0,80,862	1/1:2,32:34:88.68:719,89,0	1/1:5,17:22:6.97:263,7,0	1/1:4,13:17:32.95:271,33,0
chr10	13375196	.	T	TA	3614	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=-8.778;DP=576;FS=6.070;HRun=13;HaplotypeScore=61.3234;InbreedingCoeff=0.8838;MQ=69.97;MQ0=1;MQRankSum=0.009;QD=14.17;ReadPosRankSum=-2.028;VQSLOD=3.5551;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,31:39:24.66:489,25,0	0/0:10,0:10:17.80:0,18,123	0/1:17,0:10:19.33:19,0,28	0/0:11,0:10:4.84:0,5,26	0/0:22,1:23:22.26:0,22,293	1/1:9,20:31:50.10:426,50,0	1/1:4,16:20:21.46:342,21,0	0/0:26,0:30:51.58:0,52,359	0/0:10,0:11:25.81:0,26,168	0/0:24,1:25:39.78:0,40,405	0/0:24,0:26:19.73:0,20,264	1/1:4,14:18:30.03:279,30,0	1/1:7,8:15:22.84:200,23,0	1/1:5,13:18:24.28:345,24,0	0/0:20,0:20:53.51:0,54,369	0/0:18,1:21:13.03:0,13,292	0/0:20,0:19:49.19:0,49,318	0/0:13,0:15:30.82:0,31,197	1/1:3,11:14:32.99:294,33,0	1/1:6,14:20:8.23:324,8,0	1/1:8,9:18:9.29:217,9,0	1/1:6,13:20:38.62:317,39,0	0/0:16,0:20:36.77:0,37,236	0/0:14,0:14:29.33:0,29,195	1/1:7,18:25:39.04:362,39,0	0/0:19,1:21:44.06:0,44,312	0/0:21,0:22:55.50:0,56,368	0/0:32,0:32:36.53:0,37,296
chr10	13375496	.	CA	C	1680.29	PASS	AB=0.853;AC=36;AF=0.643;AN=56;BaseQRankSum=4.882;DP=488;FS=0.000;HRun=15;HaplotypeScore=81.6710;InbreedingCoeff=0.4359;MQ=57.13;MQ0=21;MQRankSum=-7.017;QD=4.79;ReadPosRankSum=5.421;VQSLOD=1.8063;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:27,3:27:12.48:12,0,251	1/1:5,1:6:5.90:38,6,0	0/0:29,0:13:17.88:0,18,109	0/1:29,1:9:12.76:13,0,24	1/1:10,1:11:4.38:23,4,0	1/1:6,7:13:24.25:144,24,0	1/1:9,5:15:15.94:101,16,0	1/1:10,6:15:25.56:156,26,0	0/1:6,7:13:21.23:123,0,21	0/1:12,3:16:12.66:50,0,13	1/1:9,10:21:20.34:132,20,0	0/0:15,0:14:23.82:0,24,184	0/1:19,0:19:18.15:18,0,190	0/0:9,0:9:5.83:0,6,41	1/1:10,4:13:17.62:115,18,0	1/1:4,7:10:19.75:121,20,0	1/1:17,14:31:40.44:249,40,0	1/1:8,1:8:5.69:38,6,0	0/0:17,0:16:35.41:0,35,278	0/0:20,2:20:7.71:0,8,187	0/1:10,1:12:4.85:5,0,108	0/0:19,0:20:10.29:0,10,226	1/1:5,5:12:18.81:108,19,0	1/1:10,5:13:11.66:73,12,0	0/0:15,0:22:2.96:0,3,216	1/1:7,6:14:22.29:131,22,0	1/1:12,8:23:10.67:151,11,0	1/1:5,3:8:12.88:69,13,0
chr10	13375516	.	CT	C	730.43	PASS	AB=1.000;AC=20;AF=0.357;AN=56;BaseQRankSum=9.249;DP=593;FS=9.588;HRun=1;HaplotypeScore=101.4335;InbreedingCoeff=0.3421;MQ=66.61;MQ0=11;MQRankSum=-5.957;QD=3.04;ReadPosRankSum=4.035;VQSLOD=-0.5478;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:33:74.74:0,75,944	0/1:8,0:8:7.82:16,0,8	0/0:59,0:25:51.70:0,52,617	0/0:51,0:17:13.55:0,14,337	0/1:11,0:11:12.26:29,0,12	0/0:11,0:11:18.91:0,19,336	0/0:22,0:22:59.56:0,60,893	0/0:26,0:25:8.34:0,8,124	1/1:17,1:17:32.98:165,33,0	0/1:20,0:20:15.27:15,0,28	0/1:22,0:22:10.81:60,0,11	0/0:16,0:16:26.84:0,27,450	0/0:23,0:23:44.31:0,44,727	0/0:6,0:5:11.76:0,12,131	0/1:17,0:17:28.79:32,0,29	1/1:13,0:11:2.75:57,3,0	1/1:28,1:28:25.98:144,26,0	1/1:16,0:16:13.47:63,13,0	0/0:23,0:23:51.99:0,52,924	0/0:22,0:22:30.19:0,30,765	0/0:12,0:12:22.28:0,22,395	0/0:19,1:20:42.99:0,43,683	0/1:12,0:12:7.68:47,0,8	0/1:16,0:14:7.68:38,0,8	0/0:28,0:28:77.74:0,78,1108	0/1:18,0:18:23.89:58,0,24	1/1:28,1:29:1.58:131,2,0	1/1:11,0:11:18.02:59,18,0
chr10	13375517	.	TA	T	5208.62	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=4.337;DP=593;FS=2.102;HRun=9;HaplotypeScore=87.3559;InbreedingCoeff=0.9853;MQ=66.73;MQ0=10;MQRankSum=-5.413;QD=19.73;ReadPosRankSum=0.900;VQSLOD=5.1985;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:33:77.39:0,77,793	1/1:2,5:8:11.19:89,11,0	0/0:57,1:25:36.27:0,36,446	0/0:51,0:17:35.83:0,36,304	1/1:6,5:11:20.96:191,21,0	0/0:11,0:11:23.06:0,23,233	0/0:22,0:22:60.15:0,60,679	1/1:7,17:24:48:439,48,0	1/1:3,15:17:47.99:431,48,0	1/1:2,18:20:51.02:467,51,0	1/1:5,17:22:45.02:411,45,0	0/0:15,0:16:30.09:0,30,346	0/0:24,0:24:47.62:0,48,586	0/0:6,0:5:9.03:0,9,104	1/1:4,13:17:33:297,33,0	1/1:1,12:11:27.01:247,27,0	1/1:5,24:28:66.04:602,66,0	1/1:1,15:16:36.02:329,36,0	0/0:25,0:25:54.43:0,54,724	0/0:22,0:22:51.13:0,51,569	0/0:12,0:12:30.18:0,30,308	0/0:20,0:20:48.87:0,49,529	1/1:3,9:12:26.98:246,27,0	1/1:7,9:14:27.01:245,27,0	0/0:28,0:28:67.08:0,67,764	1/1:3,15:18:43.82:385,44,0	1/1:8,21:29:59.16:527,59,0	1/1:0,11:11:33.02:302,33,0
chr10	13375526	.	AG	A	834.08	PASS	AB=0.978;AC=19;AF=0.339;AN=56;BaseQRankSum=11.844;DP=583;FS=1.690;HRun=1;HaplotypeScore=92.3043;InbreedingCoeff=0.2267;MQ=68.73;MQ0=6;MQRankSum=-8.063;QD=3.18;ReadPosRankSum=4.495;VQSLOD=0.2022;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:76.94:0,77,887	0/1:6,0:6:3:3,0,26	0/0:55,0:26:44.42:0,44,477	0/0:52,1:20:23.25:0,23,385	0/1:12,1:13:36.37:36,0,41	0/0:9,0:9:14.32:0,14,240	0/0:25,0:25:72.17:0,72,838	0/1:26,0:26:7.26:7,0,154	1/1:17,1:17:13.61:140,14,0	0/1:23,0:23:22.76:23,0,81	0/1:19,0:19:27.95:73,0,28	0/0:12,0:12:29.91:0,30,347	0/0:22,0:22:28.05:0,28,609	0/0:4,0:4:12.02:0,12,132	0/1:16,0:16:26.12:55,0,26	0/1:13,0:11:1.90:56,0,2	1/1:27,1:28:13.21:174,13,0	1/1:16,0:16:5.23:59,5,0	0/0:26,0:26:57.07:0,57,800	0/0:20,0:20:54.57:0,55,619	0/0:13,0:13:25.39:0,25,314	0/0:20,0:20:13.85:0,14,518	0/1:10,0:10:3.53:51,0,4	1/1:10,2:11:18.28:90,18,0	0/0:24,1:25:54.23:0,54,837	0/1:19,1:20:47.99:56,0,48	0/1:24,4:28:0.82:150,0,1	0/1:14,0:14:34.98:35,0,43
chr10	13376647	.	CA	C	1931.52	PASS	AB=1.000;AC=41;AF=0.732;AN=56;BaseQRankSum=5.069;DP=367;FS=2.160;HRun=1;HaplotypeScore=82.7263;InbreedingCoeff=0.7680;MQ=71.08;MQ0=1;MQRankSum=-3.863;QD=9.33;ReadPosRankSum=-4.754;VQSLOD=-0.5855;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:14:10.72:160,11,0	1/1:1,0:1:2.80:13,3,0	0/0:34,0:32:85.41:0,85,998	0/0:27,0:23:65.86:0,66,829	1/1:6,1:9:12.68:89,13,0	0/0:15,0:15:44.93:0,45,534	0/0:18,0:18:51.07:0,51,646	1/1:2,5:8:5.07:36,5,0	1/1:6,4:10:15.77:110,16,0	1/1:9,0:9:13.23:96,13,0	1/1:4,4:8:11.18:83,11,0	1/1:10,0:10:11.70:81,12,0	1/1:9,0:9:10.21:77,10,0	1/1:13,0:13:11.23:58,11,0	1/1:3,4:9:19.05:126,19,0	1/1:2,1:5:12.63:82,13,0	1/1:16,4:23:39.63:271,40,0	1/1:9,6:17:31.08:283,31,0	0/0:17,0:17:50.68:0,51,544	0/0:20,0:20:60.07:0,60,733	0/0:29,0:28:81.05:0,81,982	0/1:6,0:6:18.90:26,0,19	1/1:4,0:4:6.45:48,6,0	1/1:5,3:11:15.97:98,16,0	1/1:9,0:9:12.09:98,12,0	1/1:7,1:10:3.42:26,3,0	1/1:7,5:16:23.98:160,24,0	1/1:4,1:6:14.88:105,15,0
chr10	13376649	.	CA	C	1418.12	PASS	AB=1.000;AC=33;AF=0.589;AN=56;BaseQRankSum=7.237;DP=380;FS=8.515;HRun=1;HaplotypeScore=87.2317;InbreedingCoeff=0.8043;MQ=71.63;MQ0=1;MQRankSum=-3.937;QD=8.06;ReadPosRankSum=-2.864;VQSLOD=-0.6134;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:16,0:16:10.77:11,0,160	1/1:2,0:2:2.80:13,3,0	0/0:34,0:32:93.57:0,94,1281	0/0:27,0:23:69.22:0,69,1034	1/1:9,1:10:13.94:83,14,0	0/0:15,0:15:45.13:0,45,672	0/0:19,0:19:51.17:0,51,802	1/1:4,4:9:7.96:59,8,0	1/1:4,4:8:12.52:82,13,0	1/1:11,0:11:16.05:112,16,0	1/1:6,3:9:10.31:80,10,0	0/0:10,0:10:11.71:0,12,82	0/0:10,0:10:19.18:0,19,131	0/0:18,0:18:25.82:0,26,207	1/1:5,4:9:18.23:120,18,0	1/1:4,1:5:12.18:80,12,0	1/1:20,3:23:37.96:268,38,0	1/1:13,6:19:23.24:269,23,0	0/0:17,0:17:48.16:0,48,717	0/0:19,0:19:57.19:0,57,901	0/0:29,0:28:81.27:0,81,1251	0/0:6,0:6:11.91:0,12,113	1/1:4,0:4:2.22:24,2,0	1/1:11,1:12:16.83:98,17,0	1/1:8,0:8:8.68:73,9,0	1/1:9,1:10:3.46:25,3,0	1/1:11,5:16:24:161,24,0	1/1:4,1:5:11.79:74,12,0
chr10	13377651	.	C	CTG	23150.35	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=-15.020;DP=648;FS=0.357;HRun=0;HaplotypeScore=62.5252;InbreedingCoeff=0.9991;MQ=85.42;MQ0=2;MQRankSum=-3.396;QD=46.58;ReadPosRankSum=3.178;VQSLOD=6.2389;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,25:26:66.23:1206,66,0	1/1:1,8:9:24.08:440,24,0	0/0:24,0:24:57.19:0,57,811	0/0:17,0:17:42.11:0,42,560	1/1:3,29:32:84.29:1540,84,0	0/0:26,0:26:69.01:0,69,970	0/0:14,0:14:36.11:0,36,500	1/1:5,37:43:99:1957,114,0	1/1:0,12:12:30.07:549,30,0	1/1:1,27:28:81.28:1485,81,0	1/1:5,26:32:66.22:1182,66,0	1/1:2,17:19:48.16:880,48,0	1/1:1,15:16:39.13:714,39,0	1/1:2,15:17:39.13:715,39,0	1/1:0,27:27:81.28:1484,81,0	1/1:2,17:19:42.01:770,42,0	1/1:1,21:22:57.20:1044,57,0	1/1:1,9:11:27.06:460,27,0	0/0:22,0:22:60.18:0,60,815	0/0:32,0:32:93.29:0,93,1296	0/0:16,0:16:45.12:0,45,607	1/1:3,32:35:90.31:1649,90,0	1/1:3,23:26:69.24:1257,69,0	1/1:1,24:25:66.23:1210,66,0	1/1:1,29:29:72.25:1320,72,0	1/1:0,23:24:72.25:1314,72,0	1/1:4,28:33:81.28:1481,81,0	1/1:0,9:9:27.09:495,27,0
chr10	13378214	.	T	TTATG	44670.84	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=-14.704;DP=906;FS=2.851;HRun=0;HaplotypeScore=131.8224;InbreedingCoeff=0.9991;MQ=75.24;MQ0=0;MQRankSum=-10.387;QD=65.89;ReadPosRankSum=3.286;VQSLOD=6.9483;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,62:70:99:3671,141,0	1/1:1,11:13:33.11:922,33,0	0/0:41,0:40:99:0,111,2117	0/0:36,0:33:75.82:0,76,1338	1/1:5,32:40:87.30:2207,87,0	0/0:28,0:28:78.26:0,78,1513	0/0:29,0:29:87.26:0,87,1630	1/1:11,35:47:99:3389,103,0	1/1:1,32:34:93.32:2450,93,0	1/1:3,27:34:93.31:2441,93,0	1/1:1,25:27:66.23:1712,66,0	1/1:5,24:29:75.26:2034,75,0	1/1:0,24:26:66.23:1833,66,0	1/1:2,26:29:75.26:2038,75,0	1/1:2,40:43:99:3192,120,0	1/1:3,30:35:84.29:2171,84,0	1/1:4,34:39:93.32:2538,93,0	1/1:1,6:7:20.56:512,21,0	0/0:22,0:22:63.18:0,63,1187	0/0:32,0:32:96.28:0,96,1782	0/0:40,0:40:99:0,117,2332	1/1:1,36:39:90.31:2431,90,0	1/1:1,24:27:66.23:1762,66,0	1/1:1,19:20:48.16:1313,48,0	1/1:0,19:26:54.19:1469,54,0	1/1:3,29:33:99:2602,99,0	1/1:3,39:43:99:3076,114,0	1/1:0,14:16:36.12:911,36,0
chr10	13378858	.	A	AAATC	400.36	PASS	AB=0.625;AC=1;AF=0.018;AN=56;BaseQRankSum=-3.925;DP=651;FS=1.401;HRun=0;HaplotypeScore=101.0549;InbreedingCoeff=-0.0119;MQ=69.64;MQ0=2;MQRankSum=-0.353;QD=26.69;ReadPosRankSum=0.678;VQSLOD=3.6578;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:72.20:0,72,1106	0/0:12,0:12:15.04:0,15,214	0/0:28,0:27:17.98:0,18,201	0/0:19,0:18:14.50:0,15,217	0/0:26,0:26:42.13:0,42,635	0/0:21,0:21:39.12:0,39,592	0/0:30,0:29:45.14:0,45,681	0/0:29,0:29:18.05:0,18,260	0/0:29,0:29:42.10:0,42,596	0/0:36,0:36:54.15:0,54,737	0/0:15,0:15:30.10:0,30,471	0/0:23,0:23:54.13:0,54,754	0/0:28,0:28:48.11:0,48,648	0/0:14,0:14:27.09:0,27,406	0/0:21,0:21:36.11:0,36,542	0/0:24,0:24:36.11:0,36,543	0/0:24,0:24:42.13:0,42,635	0/1:6,8:15:23.16:475,0,23	0/0:29,0:28:30.09:0,30,439	0/0:19,0:19:42.09:0,42,568	0/0:28,0:28:66.20:0,66,984	0/0:19,0:19:33.08:0,33,468	0/0:16,0:16:30.10:0,30,473	0/0:30,0:30:60.19:0,60,923	0/0:17,0:17:39.10:0,39,549	0/0:28,0:28:16.56:0,17,612	0/0:29,0:29:45.11:0,45,661	0/0:11,0:11:27.06:0,27,379
chr10	13379694	.	TTTTA	T	8063.06	PASS	AC=44;AF=0.815;AN=54;BaseQRankSum=6.264;DP=330;FS=12.106;HRun=0;HaplotypeScore=56.1069;InbreedingCoeff=0.8151;MQ=61.89;MQ0=1;MQRankSum=-2.212;QD=30.89;ReadPosRankSum=4.150;VQSLOD=3.3106;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,14:18:33.11:563,33,0	./.	0/0:13,0:7:8.34:0,8,101	0/0:10,0:5:5.19:0,5,116	1/1:1,11:12:33.03:529,33,0	1/1:2,13:15:27.09:460,27,0	1/1:1,7:7:15.05:256,15,0	1/1:12,16:28:51.11:737,51,0	1/1:1,3:4:9.03:154,9,0	1/1:0,9:9:27.08:435,27,0	1/1:1,8:8:18.06:307,18,0	1/1:1,7:7:17.99:274,18,0	1/1:2,7:9:18.06:307,18,0	1/1:1,8:9:21.07:358,21,0	1/1:4,10:14:12.04:205,12,0	1/1:4,5:9:6.02:102,6,0	1/1:3,25:28:60.20:1023,60,0	1/1:0,12:12:18.06:307,18,0	0/0:31,0:29:57.20:0,57,1347	0/0:7,0:7:15.05:0,15,346	0/0:8,0:8:21.06:0,21,474	1/1:0,2:2:6.02:102,6,0	1/1:0,3:3:3.01:51,3,0	1/1:5,4:9:8.81:153,9,0	1/1:1,7:8:18.06:307,18,0	1/1:4,17:21:39.13:665,39,0	1/1:5,17:21:33.11:563,33,0	1/1:0,4:4:12.04:205,12,0
chr10	13379900	.	TGG	T	4468.26	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=2.249;DP=537;FS=2.310;HRun=2;HaplotypeScore=94.8417;InbreedingCoeff=0.9315;MQ=50.26;MQ0=34;MQRankSum=-2.768;QD=19.68;ReadPosRankSum=-2.407;VQSLOD=1.9292;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:43:78.39:0,78,767	1/1:1,0:1:3.01:34,3,0	0/0:54,0:11:26.61:0,27,262	0/0:51,0:14:6.13:0,6,112	1/1:19,3:21:47.33:470,47,0	0/0:10,0:10:29.98:0,30,375	0/0:24,0:20:46.47:0,46,649	1/1:18,2:20:46.18:444,46,0	1/1:8,0:7:17.93:118,18,0	1/1:12,3:15:33.67:276,34,0	1/1:13,3:15:35.95:343,36,0	0/0:14,0:13:23.60:0,24,275	0/0:12,0:12:9.79:0,10,263	0/0:13,0:13:29.75:0,30,302	1/1:11,1:12:34.19:374,34,0	1/1:11,1:13:34.83:375,35,0	1/1:19,1:20:38.69:348,39,0	1/1:7,1:8:23.55:222,24,0	0/0:27,0:25:69.18:0,69,889	0/0:15,0:13:12.92:0,13,221	0/0:19,1:17:32.96:0,33,400	0/0:11,0:11:5.57:0,6,223	1/1:7,0:7:19.54:203,20,0	1/1:22,0:19:33.68:251,34,0	0/0:14,0:14:38.60:0,39,346	1/1:19,5:21:33.81:494,34,0	1/1:24,2:25:51.88:399,52,0	1/1:6,1:7:16.97:118,17,0
chr10	13380279	.	TTAA	T	11093.77	PASS	AB=1.000;AC=31;AF=0.554;AN=56;BaseQRankSum=-11.939;DP=499;FS=4.358;HRun=0;HaplotypeScore=93.4252;InbreedingCoeff=0.9123;MQ=77.66;MQ0=2;MQRankSum=-3.212;QD=37.35;ReadPosRankSum=1.566;VQSLOD=5.4007;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:74.18:0,74,387	1/1:0,8:8:21.07:384,21,0	0/0:30,0:17:35.33:0,35,399	0/1:19,0:15:7.04:7,0,189	1/1:0,23:24:59.63:863,60,0	0/0:18,0:18:51.15:0,51,631	0/0:15,0:15:42.11:0,42,545	1/1:0,33:34:99:1500,99,0	1/1:0,15:15:38.98:628,39,0	1/1:0,19:19:57.06:813,57,0	1/1:0,21:21:53.88:851,54,0	0/0:11,0:10:29.11:0,29,197	0/0:12,0:12:25.22:0,25,145	0/0:17,0:17:34.39:0,34,163	1/1:0,15:15:35.97:578,36,0	1/1:0,12:12:26.81:489,27,0	1/1:0,26:26:63.13:1065,63,0	1/1:1,20:21:34.08:604,34,0	0/0:20,0:20:59.50:0,60,653	0/0:17,0:17:45.13:0,45,570	0/0:8,0:8:21.05:0,21,255	0/0:8,0:8:2.69:0,3,83	1/1:0,18:18:38.97:601,39,0	1/1:0,14:14:30.10:536,30,0	0/0:12,0:12:31.94:0,32,204	1/1:1,21:22:63.16:1025,63,0	1/1:0,17:17:39.13:694,39,0	1/1:0,12:12:27.06:456,27,0
chr10	13380280	.	TAA	T	5377.39	PASS	AB=0.514;AC=43;AF=0.768;AN=56;BaseQRankSum=3.899;DP=498;FS=6.178;HRun=13;HaplotypeScore=105.3485;InbreedingCoeff=0.8548;MQ=77.69;MQ0=2;MQRankSum=-3.813;QD=13.75;ReadPosRankSum=2.908;VQSLOD=3.9285;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,31:34:66.08:640,66,0	1/1:8,0:8:20.59:125,21,0	0/0:29,0:17:22.45:0,22,216	0/0:19,0:15:4.04:0,4,64	1/1:24,0:24:46.92:304,47,0	0/0:2,0:18:37.31:0,37,128	0/0:3,0:15:30.46:0,30,138	1/1:34,0:34:76.27:475,76,0	1/1:15,0:15:32.20:189,32,0	1/1:19,0:19:38.36:260,38,0	1/1:21,0:21:43.98:270,44,0	1/1:4,6:10:8.92:137,9,0	1/1:1,11:12:30.04:291,30,0	1/1:0,17:17:39.06:378,39,0	1/1:15,0:15:29.32:175,29,0	1/1:12,0:12:26.42:158,26,0	1/1:26,0:26:55.82:341,56,0	1/1:21,0:21:18.94:186,19,0	0/1:1,2:19:12.78:13,0,92	0/0:2,1:17:32.91:0,33,123	0/0:1,0:8:14.97:0,15,51	1/1:1,7:8:21.03:204,21,0	1/1:18,0:18:29.33:175,29,0	1/1:14,0:14:29.44:185,29,0	1/1:5,7:12:17.99:175,18,0	1/1:22,0:22:52.63:308,53,0	1/1:17,0:17:38.30:247,38,0	1/1:12,0:12:23.49:141,23,0
chr10	13380738	.	CA	C	895.54	PASS	AB=0.768;AC=10;AF=0.179;AN=56;BaseQRankSum=7.612;DP=614;FS=3.899;HRun=13;HaplotypeScore=80.4124;InbreedingCoeff=0.6834;MQ=74.09;MQ0=3;MQRankSum=-0.882;QD=6.73;ReadPosRankSum=1.169;VQSLOD=2.8236;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:22:38.96:0,39,440	0/0:9,0:9:18.03:0,18,175	0/0:35,1:26:16.49:0,16,262	0/0:16,0:10:0.77:0,1,88	0/1:26,4:31:12.60:13,0,420	1/1:2,0:27:46.85:135,47,0	1/1:2,0:12:18.32:53,18,0	0/0:26,2:28:16.25:0,16,465	0/0:15,0:15:33.04:0,33,316	0/0:34,0:34:84.06:0,84,782	0/0:24,0:24:57.05:0,57,541	0/0:15,1:17:16.98:0,17,305	0/0:12,0:12:11.35:0,11,264	0/0:16,0:19:47.74:0,48,432	0/0:22,0:24:65.93:0,66,618	0/0:16,0:17:41.90:0,42,394	0/0:21,0:22:53.91:0,54,504	0/0:15,0:17:41.87:0,42,385	1/1:1,16:17:47.69:349,48,0	0/1:13,15:28:36.99:249,0,37	1/1:3,15:18:35.78:263,36,0	0/0:26,0:26:62.94:0,63,580	0/0:28,1:29:35.18:0,35,499	0/0:10,0:10:24.04:0,24,233	0/0:29,0:33:74.77:0,75,690	0/0:22,2:25:7.11:0,7,379	0/0:33,2:35:55.02:0,55,820	0/0:8,0:9:20.87:0,21,189
chr10	13384697	.	C	CCAT	6068.63	PASS	AB=0.836;AC=22;AF=0.393;AN=56;BaseQRankSum=9.857;DP=1264;FS=22.657;HRun=0;HaplotypeScore=248.8325;InbreedingCoeff=-0.6679;MQ=37.08;MQ0=56;MQRankSum=-9.009;QD=5.88;ReadPosRankSum=2.380;VQSLOD=2.6402;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:47,0:37:28.01:28,0,126	0/1:11,7:19:12.42:12,0,362	0/0:34,0:10:26.78:0,27,373	0/0:29,0:11:27.06:0,27,419	0/1:39,20:60:59.23:59,0,535	0/1:25,5:26:99:201,0,116	0/1:25,7:25:37.69:38,0,97	0/1:56,12:47:99:896,0,778	0/1:24,10:28:99:165,0,442	0/1:48,23:72:99:1671,0,1299	0/0:33,25:56:2.96:0,3,331	0/0:44,0:35:11.73:0,12,486	0/1:45,0:37:31.23:31,0,305	0/0:35,0:25:3.06:0,3,121	0/1:45,22:52:96.10:96,0,451	0/1:39,16:47:99:153,0,578	0/0:25,4:24:32.46:0,32,569	0/1:12,6:13:25.60:26,0,356	0/1:14,3:11:48.92:49,0,216	0/1:74,5:73:99:345,0,214	0/1:20,3:16:36.43:257,0,36	0/1:69,0:67:39:39,0,344	0/1:39,17:54:12.86:13,0,568	0/1:20,5:21:44.37:44,0,307	0/1:43,1:42:6.02:6,0,319	0/1:54,22:68:99:1268,0,1123	0/1:37,9:43:99:199,0,911	0/1:20,5:24:99:472,0,566
chr10	13385543	.	T	TGCCATCA	7068.52	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=12.826;DP=625;FS=3.686;HRun=0;HaplotypeScore=194.5815;InbreedingCoeff=0.9930;MQ=58.86;MQ0=3;MQRankSum=-11.468;QD=83.16;ReadPosRankSum=1.083;VQSLOD=5.3921;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,13:13:27.09:1021,27,0	0/0:16,0:16:48.16:0,48,1342	0/0:28,0:24:60.20:0,60,1454	0/0:19,0:17:42.06:0,42,1092	0/0:35,0:35:99:0,105,2924	0/0:26,0:26:78.27:0,78,2180	0/0:12,0:12:36.12:0,36,978	0/0:33,0:33:96.32:0,96,2511	0/0:30,0:30:87.30:0,87,2433	0/0:24,0:24:72.25:0,72,1958	0/0:26,0:26:78.25:0,78,2061	1/1:2,10:12:36.12:1223,36,0	1/1:1,16:19:42.14:1655,42,0	1/1:0,18:18:39.13:1472,39,0	0/0:39,0:39:99:0,117,3269	0/0:30,0:30:90.28:0,90,2371	0/0:16,0:16:48.16:0,48,1280	0/0:16,0:16:48.16:0,48,1342	0/0:18,0:16:45.15:0,45,1216	0/0:27,0:27:81.28:0,81,2197	0/0:22,0:22:66.23:0,66,1796	1/1:1,8:9:12.04:484,12,0	0/0:14,0:14:42.14:0,42,1147	0/0:23,0:23:60.21:0,60,1529	1/1:1,11:13:36.12:1213,36,0	0/0:37,0:37:99:0,111,2971	0/0:40,0:40:99:0,120,3307	0/0:9,0:9:24.08:0,24,641
chr10	13385546	.	GA	G	1701.34	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=12.564;DP=619;FS=7.668;HRun=2;HaplotypeScore=138.9320;InbreedingCoeff=0.9841;MQ=56.43;MQ0=3;MQRankSum=-11.340;QD=19.56;ReadPosRankSum=4.494;VQSLOD=3.4349;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,13:14:24.06:261,24,0	0/0:16,0:16:48.16:0,48,720	0/0:25,0:21:57.19:0,57,833	0/0:16,0:14:40.68:0,41,574	0/0:36,0:36:99:0,108,1598	0/0:26,0:26:78.26:0,78,1163	0/0:13,0:13:39.09:0,39,559	0/0:30,0:30:90.29:0,90,1328	0/0:30,0:30:90.30:0,90,1348	0/0:22,0:22:66.20:0,66,968	0/0:27,0:27:78.26:0,78,1169	1/1:0,11:11:30.07:323,30,0	1/1:1,18:19:45.01:473,45,0	1/1:0,18:18:36.08:382,36,0	0/0:41,0:41:99:0,123,1843	0/0:29,0:29:87.29:0,87,1304	0/0:14,0:14:42.14:0,42,629	0/0:16,0:16:48.14:0,48,697	0/0:20,0:18:54.16:0,54,771	0/0:28,0:28:84.28:0,84,1238	0/0:24,0:24:69.23:0,69,1034	1/1:2,8:10:8.09:126,8,0	0/0:14,0:14:42.14:0,42,629	0/0:22,0:22:60.17:0,60,872	1/1:2,12:14:30.03:321,30,0	0/0:35,0:35:99:0,105,1544	0/0:40,0:40:99:0,120,1799	0/0:8,0:8:21.07:0,21,315
chr10	13388163	.	CG	C	14787.50	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=14.902;DP=759;FS=1.160;HRun=1;HaplotypeScore=77.9645;InbreedingCoeff=1.0000;MQ=86.90;MQ0=0;MQRankSum=-4.400;QD=37.72;ReadPosRankSum=4.402;VQSLOD=5.3608;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,147,2147	1/1:0,13:13:39.13:545,39,0	0/0:34,0:35:98.84:0,99,1364	0/0:20,0:20:47.88:0,48,627	1/1:0,26:26:78.26:1089,78,0	0/0:19,0:19:56.98:0,57,855	0/0:17,0:17:51.16:0,51,772	1/1:0,33:33:96.22:1201,96,0	1/1:0,20:20:51.17:712,51,0	1/1:0,36:36:99:1459,108,0	1/1:0,30:30:87.29:1214,87,0	0/0:25,0:25:75.24:0,75,1137	0/0:27,0:27:81.21:0,81,1213	0/0:28,0:28:81.26:0,81,1237	1/1:0,36:36:81.22:1131,81,0	1/1:0,38:38:93.26:1276,93,0	1/1:0,26:26:72.24:1005,72,0	1/1:0,17:17:48.16:670,48,0	0/0:28,0:28:84.12:0,84,1214	0/0:33,0:33:99:0,99,1447	0/0:30,0:30:90.14:0,90,1273	0/0:30,0:30:87.25:0,87,1328	1/1:0,22:22:63.21:879,63,0	1/1:0,28:28:72.24:1005,72,0	0/0:26,0:26:78.25:0,78,1192	1/1:0,25:25:72.16:928,72,0	1/1:0,31:31:87.29:1215,87,0	1/1:0,11:11:33.11:460,33,0
chr10	13390098	.	G	GATAT	9998.69	PASS	AB=0.581;AC=43;AF=0.796;AN=54;BaseQRankSum=-1.831;DP=382;FS=1.480;HRun=0;HaplotypeScore=62.0839;InbreedingCoeff=0.6727;MQ=68.20;MQ0=2;MQRankSum=-1.563;QD=31.25;ReadPosRankSum=1.304;VQSLOD=4.5524;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:10,0:35:9.99:135,0,10	1/1:2,1:4:5.81:89,6,0	0/0:8,0:7:2.62:0,3,37	0/0:7,0:4:2.22:0,2,7	1/1:3,3:6:9.03:228,9,0	1/1:2,0:20:33.57:152,34,0	1/1:1,0:7:11.39:64,11,0	1/1:16,28:44:84.04:1928,84,0	1/1:3,4:7:15.05:323,15,0	1/1:0,23:23:66.23:1540,66,0	1/1:3,6:10:23.87:487,24,0	1/1:3,0:14:19.59:89,20,0	1/1:3,0:9:8.39:38,8,0	1/1:4,0:17:16.76:76,17,0	1/1:3,8:11:27.08:633,27,0	1/1:5,7:11:18.06:429,18,0	1/1:3,7:10:21.07:495,21,0	1/1:2,11:13:27.06:628,27,0	0/0:23,0:22:48.62:0,49,801	0/0:12,0:12:30.10:0,30,518	0/0:7,0:7:15.05:0,15,256	1/1:0,0:1:2.80:13,3,0	1/1:0,1:1:3.01:76,3,0	./.	1/1:2,0:19:30.78:139,31,0	1/1:2,15:19:48.16:1129,48,0	1/1:5,21:27:44.93:995,45,0	1/1:3,3:7:14.84:311,15,0
chr10	13390153	.	TATAGATAG	T	7019.61	PASS	AC=28;AF=0.538;AN=52;BaseQRankSum=-8.146;DP=418;FS=0.523;HRun=0;HaplotypeScore=141.1499;InbreedingCoeff=0.9190;MQ=55.03;MQ0=5;MQRankSum=-8.740;QD=31.91;ReadPosRankSum=-2.890;VQSLOD=3.6604;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:22:32.89:0,33,266	1/1:0,3:3:9.03:225,9,0	./.	./.	1/1:2,10:12:24.08:562,24,0	0/0:12,0:22:44.93:0,45,381	0/0:7,0:8:9.01:0,9,88	1/1:31,12:42:36.06:450,36,0	0/0:2,0:11:20.95:0,21,171	1/1:15,11:26:36.12:894,36,0	1/1:6,9:15:18.06:419,18,0	0/0:8,0:20:38.92:0,39,321	0/0:12,0:12:27.09:0,27,1088	0/0:12,0:15:35.97:0,36,316	1/1:3,15:18:24.08:599,24,0	1/1:3,10:13:15.05:374,15,0	1/1:5,7:12:18.06:449,18,0	1/1:8,0:8:9.03:165,9,0	0/0:11,0:19:26.92:0,27,223	0/0:8,0:17:29.95:0,30,259	0/0:1,0:2:5.98:0,6,47	0/0:9,0:8:21.06:0,21,736	1/1:1,3:4:12.04:299,12,0	1/1:2,0:3:3.01:56,3,0	0/0:17,0:30:59.23:0,59,474	1/1:11,12:23:39.13:942,39,0	1/1:18,13:31:51.17:1212,51,0	1/1:3,6:9:15.05:374,15,0
chr10	13390491	.	TACAC	T	1003.13	PASS	AB=0.924;AC=27;AF=0.587;AN=46;BaseQRankSum=0.811;DP=528;FS=3.089;HRun=0;HaplotypeScore=85.6835;InbreedingCoeff=0.4288;MQ=53.16;MQ0=27;MQRankSum=-1.125;QD=4.27;ReadPosRankSum=3.301;VQSLOD=1.2629;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:35,0:34:16.03:16,0,40	1/1:11,3:13:8.65:119,9,0	./.	./.	1/1:11,6:18:1.81:113,2,0	1/1:5,0:6:3:28,3,0	0/0:17,0:15:0.47:0,0,1	./.	1/1:16,3:18:3.01:45,3,0	0/0:14,0:13:2.90:0,3,16	1/1:8,3:12:6:69,6,0	0/0:11,0:14:11.22:0,11,59	0/0:12,0:14:8.49:0,8,53	0/0:9,0:10:8.09:0,8,35	1/1:12,1:13:6.01:74,6,0	1/1:11,5:17:9.02:120,9,0	1/1:18,2:20:2.07:45,2,0	1/1:8,6:13:8.94:138,9,0	./.	1/1:9,0:12:12.48:113,12,0	./.	0/0:16,0:16:11.82:0,12,126	1/1:7,1:7:6:70,6,0	0/0:22,0:22:18.50:0,18,349	0/1:19,1:26:13.71:61,0,14	0/0:16,0:16:2.84:0,3,9	1/1:9,1:12:12.01:143,12,0	0/1:5,0:5:2.02:2,0,51
chr10	13391020	.	T	TAC	2337.88	PASS	AB=0.918;AC=36;AF=0.643;AN=56;BaseQRankSum=-0.737;DP=967;FS=0.000;HRun=0;HaplotypeScore=214.3665;InbreedingCoeff=0.3558;MQ=39.38;MQ0=35;MQRankSum=2.144;QD=3.71;ReadPosRankSum=3.185;VQSLOD=2.4977;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:53:3.99:0,4,17	1/1:5,0:3:2.69:8,3,0	0/0:52,0:7:2.93:0,3,34	0/0:56,0:10:14.74:0,15,138	1/1:25,0:22:4.55:16,5,0	0/0:27,0:21:1.24:0,1,5	0/0:24,0:20:0.77:0,1,10	0/0:83,0:61:11.44:0,11,146	0/1:33,0:27:3.15:3,0,3	1/1:46,0:37:1.69:38,2,0	1/1:24,0:20:2.22:8,2,0	1/1:40,0:36:9.33:47,9,0	1/1:34,0:29:3.52:48,4,0	1/1:40,0:34:7.94:57,8,0	1/1:28,0:21:6.15:19,6,0	1/1:29,0:26:19.58:125,20,0	0/0:17,0:9:0.45:0,0,10	1/1:17,0:14:6.53:26,7,0	1/1:16,5:20:9.97:294,10,0	1/1:13,16:29:32.95:517,33,0	0/1:50,45:87:99:1075,0,138	1/1:35,0:32:5.99:52,6,0	0/0:22,0:18:2.50:0,2,9	0/1:27,0:15:2.25:8,0,2	1/1:15,0:14:4.53:25,5,0	0/1:36,0:33:15.19:38,0,15	1/1:34,0:25:12.78:63,13,0	1/1:13,0:11:9.06:26,9,0
chr10	13391031	.	A	AT	1182.19	PASS	AB=0.712;AC=8;AF=0.143;AN=56;BaseQRankSum=2.736;DP=1014;FS=21.745;HRun=0;HaplotypeScore=222.0970;InbreedingCoeff=-0.0678;MQ=34.69;MQ0=68;MQRankSum=-1.425;QD=4.86;ReadPosRankSum=-1.648;VQSLOD=1.2045;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:37,16:51:99:267,0,165	0/0:6,0:3:6:0,6,66	0/0:47,1:7:14.36:0,14,152	0/0:49,0:7:20.98:0,21,266	0/0:29,0:26:21.05:0,21,272	0/0:27,0:22:24.55:0,25,332	0/0:27,0:22:31.62:0,32,390	0/0:93,0:63:1.93:0,2,1110	0/0:32,0:24:27.05:0,27,354	0/0:60,0:44:81.87:0,82,1220	1/1:28,0:22:0.80:1,1,0	0/1:21,13:31:99:263,0,132	0/1:22,13:29:99:284,0,244	0/1:20,17:29:99:271,0,167	0/0:28,0:18:17.08:0,17,250	0/0:29,0:25:25.47:0,25,433	0/0:15,0:6:11.68:0,12,166	0/0:14,0:13:22.99:0,23,354	0/0:28,0:21:59.97:0,60,654	0/0:29,0:27:50.89:0,51,496	0/0:103,0:92:99:0,154,1640	0/1:18,13:29:92.64:93,0,202	0/0:27,0:21:0.97:0,1,191	0/0:29,0:17:8.94:0,9,126	0/1:9,8:14:99:126,0,102	0/0:42,0:32:51.29:0,51,921	0/0:36,0:28:49.56:0,50,671	0/0:13,0:9:19.61:0,20,247
chr10	13391044	.	CCAT	C	2160.09	PASS	AB=0.858;AC=22;AF=0.393;AN=56;BaseQRankSum=7.114;DP=1103;FS=41.595;HRun=0;HaplotypeScore=251.8603;InbreedingCoeff=-0.4003;MQ=32.71;MQ0=102;MQRankSum=-5.352;QD=2.92;ReadPosRankSum=7.249;VQSLOD=0.8092;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:42,4:49:30.88:0,31,852	0/1:11,0:6:19.69:20,0,90	0/0:36,0:3:4.09:0,4,76	0/1:40,1:10:34.80:35,0,318	1/1:28,3:28:4.30:21,4,0	0/1:20,9:23:21.03:21,0,501	0/0:22,6:25:21.69:0,22,740	0/1:108,5:79:99:163,0,2006	0/1:32,6:26:99:151,0,136	0/1:64,8:47:99:115,0,1042	0/0:27,7:27:3.22:0,3,52	0/1:20,8:30:97.05:97,0,561	0/1:25,10:28:99:211,0,646	0/1:23,17:30:99:108,0,495	0/1:35,4:26:53.38:58,0,53	0/1:13,1:23:67.16:75,0,67	0/1:20,6:16:82.36:106,0,82	1/1:12,2:11:9.91:190,10,0	0/0:31,0:20:47.49:0,47,690	0/0:28,0:25:45.62:0,46,763	0/0:113,1:98:99:0,190,3503	0/0:20,10:30:33.96:0,34,700	0/1:25,5:19:44.22:44,0,47	0/1:26,5:20:7.73:79,0,8	0/1:9,8:12:69.88:70,0,196	0/1:45,8:38:99:393,0,556	0/1:26,8:27:99:293,0,103	0/1:15,1:13:73.24:73,0,85
chr10	13391060	.	TACACAC	T	6299.80	PASS	AB=0.728;AC=19;AF=0.352;AN=54;BaseQRankSum=6.173;DP=1177;FS=39.191;HRun=0;HaplotypeScore=278.6882;InbreedingCoeff=0.2463;MQ=34.76;MQ0=147;MQRankSum=-9.490;QD=11.09;ReadPosRankSum=-1.481;VQSLOD=2.1515;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:62,0:52:73.05:0,73,1962	1/1:6,5:7:12.49:224,12,0	./.	0/0:29,0:8:11.91:0,12,269	0/0:19,19:32:1.15:0,1,15	0/0:29,0:24:31.12:0,31,948	0/0:30,0:25:54.48:0,54,1630	0/1:106,12:78:99:456,0,883	0/1:20,18:30:99:229,0,211	0/1:54,22:52:99:1704,0,691	0/1:25,11:29:69.01:94,0,69	0/0:37,0:32:57.32:0,57,1584	0/0:34,0:27:61.42:0,61,1422	0/0:41,0:33:51.27:0,51,1446	0/1:13,27:30:65.71:456,0,66	0/1:10,13:23:32.24:400,0,32	0/1:12,26:28:7.06:180,0,7	1/1:10,2:9:12.04:295,12,0	0/0:41,0:20:60.20:0,60,1572	0/0:29,0:26:48.62:0,49,1388	0/0:136,0:115:99:0,250,7224	0/0:39,0:33:45.09:0,45,1356	0/1:21,4:17:1.14:1,0,63	1/1:17,16:21:4.72:42,5,0	0/0:25,0:17:30.10:0,30,932	0/1:43,22:43:61.48:1025,0,61	1/1:14,19:28:34.21:710,34,0	1/1:8,7:12:24.01:483,24,0
chr10	13391066	.	C	CACACCAT	6936.03	PASS	AB=0.983;AC=21;AF=0.375;AN=56;BaseQRankSum=7.265;DP=1185;FS=46.608;HRun=0;HaplotypeScore=301.0593;InbreedingCoeff=0.2090;MQ=35.32;MQ0=141;MQRankSum=-9.780;QD=11.01;ReadPosRankSum=-4.396;VQSLOD=2.2846;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:66,0:55:68.96:0,69,1660	1/1:11,0:8:12.93:240,13,0	0/1:34,0:1:0:0,0,0	0/0:31,0:8:15.42:0,15,286	0/1:38,0:33:13.06:13,0,20	0/0:29,0:24:33.63:0,34,823	0/0:32,0:27:52.55:0,53,1320	0/1:118,0:78:99:923,0,896	0/1:39,0:30:99:211,0,211	0/1:78,0:54:99:1462,0,596	0/1:30,3:27:62.29:149,0,62	0/0:39,0:35:59.22:0,59,1293	0/0:35,0:27:64.45:0,64,1274	0/0:43,0:35:51.16:0,51,1164	0/1:37,1:29:44.18:491,0,44	0/1:25,0:22:25.19:358,0,25	0/1:37,1:28:7.62:183,0,8	1/1:9,1:8:15.05:368,15,0	0/0:44,0:20:60.20:0,60,1351	0/0:31,0:26:51.32:0,51,1152	0/0:142,0:120:99:0,276,6305	0/0:39,0:33:44.41:0,44,1077	0/1:26,0:18:13.79:14,0,70	1/1:31,0:21:7.33:50,7,0	0/0:24,0:17:27.48:0,27,723	0/1:63,1:42:32.20:1204,0,32	1/1:31,0:25:43.82:763,44,0	1/1:12,0:11:26.95:505,27,0
chr10	13391074	.	CACCAT	C	261.39	PASS	AB=0.986;AC=12;AF=0.214;AN=56;BaseQRankSum=11.453;DP=1113;FS=32.850;HRun=0;HaplotypeScore=270.9780;InbreedingCoeff=-0.1093;MQ=36.58;MQ0=127;MQRankSum=-10.468;QD=0.75;ReadPosRankSum=4.122;VQSLOD=1.4933;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:63,0:53:96.28:0,96,2291	0/1:10,0:9:2.75:3,0,199	1/1:39,0:1:3.01:31,3,0	0/1:37,0:13:15.42:15,0,462	0/0:33,1:29:19.08:0,19,341	0/0:28,0:23:40.17:0,40,1028	0/0:32,0:27:67.14:0,67,1818	0/0:102,0:69:42.17:0,42,1726	0/1:36,0:29:7.32:7,0,210	0/1:69,0:51:99:141,0,903	0/0:29,2:26:21.94:0,22,372	0/0:41,0:37:62.51:0,63,1633	0/0:33,0:27:24.42:0,24,1276	0/0:41,0:34:46.42:0,46,1371	0/1:36,0:28:20.05:20,0,119	0/1:22,1:20:5.72:6,0,230	0/0:38,0:29:1.58:0,2,170	0/1:11,0:8:31.52:32,0,121	0/0:44,0:21:59.19:0,59,1450	0/0:31,0:26:52.42:0,52,1445	0/0:136,0:118:99:0,271,7387	0/0:33,0:28:44.43:0,44,1261	0/0:21,0:16:11.77:0,12,236	0/0:29,0:20:15.63:0,16,196	0/0:26,0:20:33.11:0,33,998	0/1:53,0:34:27.13:27,0,476	0/1:27,0:23:73.78:74,0,201	0/1:8,1:8:23.43:47,0,23
chr10	13391524	.	A	AAAAC	14628.34	PASS	AB=0.818;AC=34;AF=0.607;AN=56;BaseQRankSum=-13.191;DP=697;FS=1.413;HRun=0;HaplotypeScore=119.6520;InbreedingCoeff=0.8582;MQ=56.89;MQ0=24;MQRankSum=7.681;QD=30.80;ReadPosRankSum=1.028;VQSLOD=4.8670;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:32:26.17:0,26,207	1/1:4,7:10:23.89:458,24,0	0/0:22,0:12:7.93:0,8,227	0/0:19,0:9:12.43:0,12,128	1/1:7,25:32:68.44:1393,68,0	1/1:8,16:22:33.11:783,33,0	1/1:16,10:25:21.07:499,21,0	1/1:20,21:42:67.58:877,68,0	1/1:4,13:15:30.10:712,30,0	1/1:8,20:30:46.44:1389,46,0	1/1:3,14:19:41.97:853,42,0	0/0:9,0:29:41.72:0,42,355	0/0:8,0:20:30.92:0,31,278	0/1:7,0:24:3.39:3,0,169	1/1:6,20:29:48.13:1103,48,0	1/1:8,10:18:21.07:499,21,0	0/1:24,31:53:8.46:1561,0,8	1/1:10,13:20:36.12:855,36,0	0/0:19,0:14:13.81:0,14,237	0/0:17,0:17:17.01:0,17,415	0/0:18,0:17:33.11:0,33,526	0/0:9,0:24:20.32:0,20,150	1/1:8,9:18:15.05:355,15,0	1/1:16,19:34:45.15:1033,45,0	0/0:6,0:21:35.44:0,35,277	1/1:11,13:25:45.08:831,45,0	1/1:5,16:21:42.14:997,42,0	1/1:7,10:17:18.06:427,18,0
chr10	13391715	.	CCACA	C	1725.44	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.879;DP=697;FS=1.412;HRun=0;HaplotypeScore=113.0233;InbreedingCoeff=0.9989;MQ=81.29;MQ0=0;MQRankSum=-2.085;QD=37.51;ReadPosRankSum=0.745;VQSLOD=3.9913;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,141,3630	0/0:9,0:9:27.09:0,27,714	0/0:22,0:21:57.19:0,57,1339	0/0:21,0:21:48.16:0,48,1169	0/0:29,0:29:81.28:0,81,2136	1/1:2,20:22:48.16:896,48,0	1/1:6,18:24:51.17:951,51,0	0/0:33,0:33:84.29:0,84,2235	0/0:27,0:27:72.25:0,72,1829	0/0:42,0:42:99:0,123,3152	0/0:16,0:16:48.15:0,48,1227	0/0:32,0:32:93.32:0,93,2436	0/0:19,0:19:54.19:0,54,1435	0/0:26,0:26:63.22:0,63,1678	0/0:27,0:27:78.27:0,78,2048	0/0:21,0:21:63.22:0,63,1679	0/0:28,0:28:81.28:0,81,2111	0/0:13,0:13:39.13:0,39,1029	0/0:25,0:25:72.24:0,72,1822	0/0:15,0:15:39.09:0,39,926	0/0:26,0:26:72.25:0,72,1878	0/0:24,0:24:69.24:0,69,1839	0/0:21,0:21:60.21:0,60,1558	0/0:30,0:30:87.28:0,87,2194	0/0:9,0:9:27.09:0,27,688	0/0:37,0:37:99:0,105,2745	0/0:33,0:33:93.32:0,93,2259	0/0:17,0:17:51.18:0,51,1333
chr10	13392324	.	C	CA	7106.41	PASS	AB=0.529;AC=41;AF=0.732;AN=56;BaseQRankSum=-7.646;DP=633;FS=0.000;HRun=11;HaplotypeScore=81.8663;InbreedingCoeff=0.8839;MQ=76.96;MQ0=0;MQRankSum=-0.610;QD=14.68;ReadPosRankSum=0.432;VQSLOD=5.2321;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,4:24:48.95:307,49,0	0/1:1,8:9:5.20:134,0,5	0/0:16,0:19:24.10:0,24,148	0/0:12,0:11:14.59:0,15,110	1/1:7,23:30:36.73:518,37,0	0/0:3,0:27:52.83:0,53,182	0/0:3,0:18:28.50:0,29,82	1/1:11,16:28:53.87:508,54,0	1/1:6,19:25:30.06:305,30,0	1/1:13,13:26:3.15:372,3,0	1/1:5,13:19:15.70:317,16,0	1/1:5,0:23:20.83:101,21,0	1/1:2,1:21:17.30:103,17,0	1/1:4,1:18:17:84,17,0	1/1:9,13:22:33.06:330,33,0	1/1:4,22:26:57.11:579,57,0	1/1:1,23:25:53.93:527,54,0	1/1:3,10:13:24.02:234,24,0	0/0:22,0:23:49.82:0,50,375	0/0:25,0:26:58.77:0,59,447	0/0:24,0:24:60.61:0,61,466	1/1:8,0:30:42.87:234,43,0	1/1:10,11:22:31.93:471,32,0	1/1:3,24:27:47.78:487,48,0	1/1:5,2:25:42.78:230,43,0	1/1:6,23:29:45.88:639,46,0	1/1:6,17:23:11.81:256,12,0	1/1:5,14:19:18.85:373,19,0
chr10	13394611	.	CT	C	3512.49	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=5.602;DP=660;FS=1.977;HRun=11;HaplotypeScore=74.0728;InbreedingCoeff=0.9838;MQ=68.41;MQ0=0;MQRankSum=0.009;QD=16.04;ReadPosRankSum=1.188;VQSLOD=4.5859;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,34:40:42.70:559,43,0	0/0:5,0:5:9.02:0,9,96	0/0:18,1:17:23.72:0,24,198	0/0:14,0:13:22.91:0,23,237	0/0:27,0:29:67.05:0,67,684	0/0:4,0:22:34.16:0,34,171	0/0:3,0:17:12.99:0,13,153	0/0:30,2:34:34.46:0,34,730	0/0:23,0:23:55.38:0,55,579	0/0:41,3:44:43.15:0,43,1050	0/0:20,0:20:23.47:0,23,441	1/1:10,20:30:42.81:546,43,0	1/1:3,21:24:59.92:492,60,0	1/1:4,19:25:24.12:332,24,0	0/0:23,0:24:69.01:0,69,718	0/0:25,2:28:19.69:0,20,583	0/0:25,0:25:66.13:0,66,680	0/0:24,2:26:60.14:0,60,632	1/1:5,19:25:58.93:470,59,0	1/1:1,10:13:34.01:254,34,0	1/1:5,20:25:21.94:387,22,0	1/1:4,18:23:31.75:252,32,0	0/0:15,0:15:42.09:0,42,433	0/0:22,0:23:62.99:0,63,654	1/1:3,11:14:26.96:222,27,0	0/0:33,0:33:52.83:0,53,714	0/0:24,0:26:62.61:0,63,592	0/0:11,0:11:29.81:0,30,285
chr10	13394713	.	GC	G	4552.67	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=9.928;DP=587;FS=0.000;HRun=1;HaplotypeScore=60.9708;InbreedingCoeff=0.9957;MQ=73.22;MQ0=0;MQRankSum=-2.936;QD=36.72;ReadPosRankSum=1.151;VQSLOD=4.9915;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,37:37:93.28:1277,93,0	0/0:7,0:7:21.07:0,21,335	0/0:21,0:20:57.18:0,57,824	0/0:20,0:18:49.35:0,49,700	0/0:10,0:10:30.09:0,30,452	0/0:16,0:15:39.13:0,39,623	0/0:26,0:26:75.24:0,75,1173	0/0:25,0:25:75.24:0,75,1154	0/0:26,0:26:75.25:0,75,1184	0/0:22,0:22:63.21:0,63,1001	0/0:13,0:13:39.13:0,39,623	1/1:0,35:35:99:1374,99,0	1/1:0,14:14:36.12:502,36,0	1/1:0,19:19:54.07:728,54,0	0/0:22,0:22:63.20:0,63,982	0/0:29,0:29:87.30:0,87,1386	0/0:35,0:35:99:0,99,1526	0/0:21,0:21:63.21:0,63,1006	0/0:21,0:21:63.18:0,63,936	0/0:19,0:19:54.17:0,54,834	0/0:23,0:23:69.19:0,69,1032	1/1:0,7:7:15.05:210,15,0	0/0:14,0:14:42.14:0,42,666	0/0:27,0:27:81.28:0,81,1293	1/1:0,12:12:33.11:461,33,0	0/0:23,0:23:63.21:0,63,1006	0/0:29,0:26:75.24:0,75,1171	0/0:14,0:14:42.14:0,42,671
chr10	13394806	.	GT	G	1142.94	PASS	AB=0.682;AC=28;AF=0.500;AN=56;BaseQRankSum=-7.070;DP=489;FS=8.143;HRun=16;HaplotypeScore=88.9480;InbreedingCoeff=0.3954;MQ=64.50;MQ0=15;MQRankSum=5.870;QD=3.85;ReadPosRankSum=6.485;VQSLOD=0.5340;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:33:51.68:0,52,252	1/1:1,3:4:2.77:14,3,0	0/0:19,0:14:21.08:0,21,143	0/1:11,1:10:3.14:3,0,21	1/1:11,3:16:0.29:85,0,0	1/1:4,1:20:32.56:94,33,0	1/1:5,0:15:18.29:53,18,0	0/1:18,12:29:14.69:130,0,15	0/1:6,9:14:13.87:14,0,18	1/1:8,9:16:1.04:114,1,0	0/1:7,3:12:1.46:71,0,1	0/0:24,0:26:53.82:0,54,279	0/0:16,0:18:37.58:0,38,209	0/0:9,0:13:17.81:0,18,96	0/1:8,7:17:15.20:120,0,15	0/1:4,7:13:9.36:50,0,9	1/1:12,17:31:21.20:119,21,0	0/1:4,9:14:4.27:75,0,4	0/0:13,0:21:44.55:0,45,252	0/0:10,0:13:17:0,17,88	0/0:6,0:9:11.61:0,12,69	0/0:17,0:17:21.40:0,21,111	0/1:4,4:8:12.02:12,0,19	1/1:7,14:19:17.19:107,17,0	0/0:6,0:12:16.97:0,17,87	1/1:13,12:27:7.39:136,7,0	1/1:6,10:16:15.15:91,15,0	1/1:1,1:4:7.92:42,8,0
chr10	13394912	.	GT	G	2507.03	PASS	AB=0.756;AC=26;AF=0.464;AN=56;BaseQRankSum=-1.505;DP=481;FS=8.478;HRun=14;HaplotypeScore=60.8449;InbreedingCoeff=0.5525;MQ=50.55;MQ0=36;MQRankSum=2.365;QD=8.59;ReadPosRankSum=4.351;VQSLOD=2.3692;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:75.02:0,75,630	0/0:3,0:2:0.47:0,0,1	0/0:13,0:6:2.66:0,3,34	0/1:7,0:2:0:0,0,0	1/1:10,19:31:52.78:356,53,0	0/0:5,0:12:9.11:0,9,49	0/0:10,0:14:26.20:0,26,179	1/1:6,7:15:18.75:111,19,0	1/1:0,8:8:17.86:123,18,0	1/1:7,20:25:32.97:347,33,0	1/1:8,9:14:23.63:164,24,0	0/0:16,0:16:26.94:0,27,230	0/0:19,0:17:39.02:0,39,335	0/0:15,0:15:28.50:0,29,238	0/1:5,5:8:1.48:85,0,1	1/1:3,9:15:26.94:162,27,0	1/1:3,18:21:43.69:293,44,0	0/1:6,10:13:28.87:117,0,29	0/0:15,0:15:35.06:0,35,219	0/0:14,0:17:32.99:0,33,199	0/0:4,0:4:8.48:0,8,36	0/1:15,2:18:11.69:12,0,148	1/1:7,12:19:1.24:158,1,0	0/1:8,5:10:18.92:32,0,19	0/0:8,0:11:17.86:0,18,154	1/1:7,9:16:29.87:182,30,0	0/1:13,19:29:50.05:251,0,50	1/1:3,17:20:44.55:308,45,0
chr10	13394948	.	A	ATT	1029.86	PASS	AC=6;AF=0.111;AN=54;BaseQRankSum=-2.785;DP=450;FS=3.527;HRun=10;HaplotypeScore=80.8946;InbreedingCoeff=0.9027;MQ=72.64;MQ0=0;MQRankSum=-3.207;QD=25.75;ReadPosRankSum=-1.096;VQSLOD=3.5306;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:54.07:0,54,548	./.	0/0:14,0:13:6.78:0,7,128	0/0:10,0:9:15.50:0,15,149	0/0:26,0:26:69.13:0,69,701	0/0:10,0:10:27.05:0,27,268	0/0:8,0:8:15:0,15,151	0/0:32,0:31:72.06:0,72,724	0/0:12,0:13:29.78:0,30,286	0/0:27,0:28:71.82:0,72,703	0/0:13,0:13:33.07:0,33,336	0/0:15,0:15:39.08:0,39,395	0/0:15,0:15:38.07:0,38,371	0/0:14,0:14:36.06:0,36,366	0/0:13,0:13:39.09:0,39,396	0/0:13,0:13:30.04:0,30,305	0/0:20,0:20:34.59:0,35,364	0/0:17,0:17:39.07:0,39,395	1/1:5,10:16:29.59:411,30,0	1/1:4,15:20:44.62:666,45,0	1/1:1,3:4:6.02:86,6,0	0/0:14,0:14:36.05:0,36,366	0/0:18,0:19:50.53:0,51,472	0/0:8,0:8:14.98:0,15,142	0/0:6,0:6:12.02:0,12,122	0/0:26,0:28:59.83:0,60,660	0/0:25,0:26:61.87:0,62,660	0/0:23,0:23:45.06:0,45,457
chr10	13395216	.	A	AT	1420.42	PASS	AB=0.682;AC=5;AF=0.089;AN=56;BaseQRankSum=-7.861;DP=711;FS=17.686;HRun=8;HaplotypeScore=74.9794;InbreedingCoeff=0.7746;MQ=76.21;MQ0=0;MQRankSum=-0.913;QD=22.91;ReadPosRankSum=0.231;VQSLOD=2.3612;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:47,3:51:39.11:0,39,1081	0/0:6,0:6:15.01:0,15,137	0/0:23,0:19:47.51:0,48,416	0/0:17,0:17:29.89:0,30,254	0/0:25,0:25:69.01:0,69,625	0/0:18,0:18:45.01:0,45,412	0/0:31,0:31:87.03:0,87,790	0/0:34,0:34:81.02:0,81,741	0/0:17,0:16:45.02:0,45,412	0/0:27,0:27:78.02:0,78,707	0/0:12,0:12:26.04:0,26,225	0/0:37,0:37:99:0,105,951	0/0:25,0:23:36.67:0,37,523	0/0:23,0:23:59.98:0,60,541	0/0:33,0:33:95.91:0,96,859	0/0:35,0:35:87.04:0,87,796	0/0:31,0:30:83.92:0,84,750	0/0:19,0:19:45.02:0,45,412	0/1:8,7:15:27.48:215,0,27	1/1:4,26:29:72.16:816,72,0	1/1:2,15:17:45.13:519,45,0	0/0:19,0:19:51.02:0,51,467	0/0:17,0:17:51.01:0,51,462	0/0:34,0:34:87:0,87,788	0/0:26,0:26:75.01:0,75,679	0/0:34,0:35:98.07:0,98,881	0/0:33,0:32:89.98:0,90,814	0/0:20,0:20:42.02:0,42,384
chr10	13395320	.	G	GGTGTGT	6068.40	PASS	AB=1.000;AC=45;AF=0.900;AN=50;BaseQRankSum=-2.988;DP=669;FS=3.619;HRun=0;HaplotypeScore=221.1685;InbreedingCoeff=0.5119;MQ=57.19;MQ0=28;MQRankSum=2.331;QD=11.18;ReadPosRankSum=-0.793;VQSLOD=3.9899;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:46,0:45:24.07:424,24,0	1/1:7,0:7:3.01:56,3,0	./.	./.	1/1:29,0:29:3.01:75,3,0	1/1:11,0:19:3.90:43,4,0	1/1:17,11:34:12.28:543,12,0	1/1:22,0:22:13.40:186,13,0	1/1:18,0:17:15.01:289,15,0	1/1:33,0:32:33.99:589,34,0	0/1:9,0:5:0:0,0,0	1/1:27,0:23:3.01:77,3,0	1/1:15,0:12:12.04:263,12,0	1/1:23,0:20:12.49:203,12,0	1/1:31,0:31:24.08:461,24,0	1/1:23,0:23:15.05:305,15,0	1/1:24,0:23:12.47:171,12,0	1/1:26,0:24:30.10:527,30,0	0/0:24,0:22:9.03:0,9,119	0/0:16,0:16:6.02:0,6,84	./.	1/1:25,0:23:14.95:262,15,0	1/1:17,0:17:8.88:164,9,0	1/1:29,0:28:5.95:79,6,0	1/1:17,0:15:6.02:81,6,0	1/1:30,0:27:33.10:589,33,0	1/1:22,0:22:33.01:477,33,0	1/1:10,0:9:9.03:202,9,0
chr10	13396631	.	CAAAAA	C	11096.06	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-11.634;DP=686;FS=3.760;HRun=13;HaplotypeScore=149.2732;InbreedingCoeff=0.9519;MQ=60.59;MQ0=11;MQRankSum=-1.934;QD=29.35;ReadPosRankSum=4.018;VQSLOD=2.7094;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:46:62.39:0,62,319	1/1:0,11:11:24.08:407,24,0	0/0:45,0:15:23.99:0,24,298	0/0:48,0:11:10.78:0,11,152	1/1:1,26:27:68.65:964,69,0	1/1:3,0:24:5.09:100,5,0	1/1:3,0:26:15.97:108,16,0	1/1:6,15:21:5.25:588,5,0	1/1:3,19:22:36.11:615,36,0	1/1:1,19:20:57.06:825,57,0	1/1:3,19:22:47.91:717,48,0	0/0:7,0:20:35.96:0,36,204	0/0:2,0:17:35.19:0,35,167	0/0:4,0:19:32.76:0,33,168	1/1:3,26:29:65.79:1129,66,0	1/1:6,23:29:47.66:821,48,0	1/1:4,30:34:57.05:976,57,0	1/1:2,15:17:21.22:518,21,0	0/0:4,0:21:52.25:0,52,254	0/0:5,0:22:42.18:0,42,264	0/0:4,0:21:34.18:0,34,156	0/0:6,0:18:33.40:0,33,172	1/1:2,17:19:32.58:560,33,0	1/1:3,13:15:30.08:511,30,0	0/0:3,0:26:45.44:0,45,247	1/1:1,28:29:81.17:1235,81,0	1/1:2,20:22:48.15:817,48,0	1/1:2,7:9:12.01:205,12,0
chr10	13396825	.	TA	T	13620.14	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-5.338;DP=689;FS=7.567;HRun=10;HaplotypeScore=74.4405;InbreedingCoeff=0.9908;MQ=67.95;MQ0=0;MQRankSum=-4.372;QD=20.76;ReadPosRankSum=4.264;VQSLOD=5.6488;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,41:44:99:1042,120,0	1/1:0,8:8:24:208,24,0	0/0:11,0:11:29.75:0,30,277	0/0:22,0:19:21.28:0,21,248	1/1:2,20:22:53.98:468,54,0	1/1:1,14:15:29.98:260,30,0	1/1:7,30:37:36.28:652,36,0	1/1:10,25:35:54.60:575,55,0	1/1:1,17:18:50.99:443,51,0	1/1:1,21:22:50.95:443,51,0	1/1:6,26:32:74.79:633,75,0	1/1:3,32:35:92.97:807,93,0	1/1:4,23:27:62.98:546,63,0	1/1:2,17:19:44.98:387,45,0	1/1:4,36:40:62.79:774,63,0	1/1:3,40:43:99:964,111,0	1/1:6,22:28:41.32:499,41,0	1/1:3,20:23:56.99:495,57,0	1/1:4,19:23:26.81:462,27,0	1/1:2,14:16:41.99:365,42,0	1/1:3,14:17:17.28:291,17,0	1/1:2,14:16:41.99:365,42,0	1/1:2,20:22:56.98:495,57,0	1/1:1,20:21:44.99:391,45,0	1/1:2,14:16:41.95:357,42,0	1/1:2,27:29:80.86:691,81,0	1/1:2,24:26:59.95:520,60,0	1/1:3,18:22:56.91:488,57,0
chr10	13397155	.	C	CGT	7059.58	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-6.153;DP=710;FS=2.650;HRun=0;HaplotypeScore=114.9730;InbreedingCoeff=0.9999;MQ=79.69;MQ0=0;MQRankSum=-2.382;QD=44.12;ReadPosRankSum=2.625;VQSLOD=5.9844;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,44:46:99:1851,99,0	0/0:11,0:11:30.10:0,30,440	0/0:24,0:24:61.65:0,62,822	0/0:20,0:20:54.18:0,54,767	0/0:29,0:29:81.26:0,81,1171	0/0:23,0:23:69.19:0,69,953	0/0:25,0:25:72.23:0,72,1025	0/0:35,0:35:96.31:0,96,1376	0/0:22,0:22:66.21:0,66,943	0/0:22,0:22:60.19:0,60,850	0/0:25,0:25:66.22:0,66,952	1/1:1,27:28:69.24:1290,69,0	1/1:1,20:21:57.20:1066,57,0	1/1:0,19:19:45.15:841,45,0	0/0:30,0:30:87.28:0,87,1259	0/0:32,0:32:93.31:0,93,1364	0/0:22,0:22:66.20:0,66,940	0/0:20,0:20:60.15:0,60,829	0/0:30,0:30:78.25:0,78,1129	0/0:24,0:24:72.24:0,72,1055	0/0:32,0:32:84.26:0,84,1211	1/1:3,23:27:69.24:1280,69,0	0/0:26,0:26:75.23:0,75,1057	0/0:23,0:23:63.18:0,63,888	1/1:0,19:19:39.13:730,39,0	0/0:19,0:19:54.15:0,54,741	0/0:30,0:29:81.24:0,81,1148	0/0:26,0:26:78.26:0,78,1143
chr10	13397261	.	AGAAGAAGGCGTTAAAT	A	13892.38	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=15.659;DP=717;FS=6.382;HRun=0;HaplotypeScore=308.8870;InbreedingCoeff=1.0000;MQ=61.41;MQ0=2;MQRankSum=-15.799;QD=121.86;ReadPosRankSum=-0.126;VQSLOD=3.6413;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,21:22:45.11:1985,45,0	0/0:17,0:17:51.18:0,51,3842	0/0:20,0:15:45.15:0,45,2980	0/0:31,0:26:66.70:0,67,4617	0/0:27,0:27:81.28:0,81,6309	0/0:19,0:19:57.20:0,57,4148	0/0:26,0:26:78.27:0,78,6128	0/0:32,0:32:96.33:0,96,6077	0/0:26,0:26:78.27:0,78,6049	0/0:25,0:25:75.25:0,75,5445	0/0:21,0:21:63.20:0,63,4410	1/1:0,21:21:60.21:2934,60,0	1/1:2,17:20:54.19:2622,54,0	1/1:0,17:17:42:2053,42,0	0/0:44,0:44:99:0,132,10400	0/0:29,0:29:87.30:0,87,6684	0/0:29,0:29:87.27:0,87,6147	0/0:24,0:24:72.25:0,72,5414	0/0:17,0:17:51.18:0,51,3589	0/0:28,0:28:81.28:0,81,5578	0/0:30,0:30:90.31:0,90,6828	1/1:0,21:21:57.20:2499,57,0	0/0:34,0:34:99:0,102,7490	0/0:35,0:35:99:0,105,8143	1/1:0,13:13:39.13:1800,39,0	0/0:38,0:38:99:0,114,9000	0/0:34,0:34:99:0,102,7270	0/0:16,0:16:48.16:0,48,3573
chr10	13397469	.	A	AAAAC	10924.26	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-14.578;DP=792;FS=7.628;HRun=0;HaplotypeScore=123.6848;InbreedingCoeff=0.9972;MQ=62.60;MQ0=4;MQRankSum=0.206;QD=38.06;ReadPosRankSum=1.556;VQSLOD=4.9353;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,35:46:78.27:1792,78,0	0/0:9,0:9:18.06:0,18,288	0/0:40,0:32:36.12:0,36,550	0/0:26,0:25:30.07:0,30,441	0/0:18,0:18:33.09:0,33,499	0/0:4,0:19:30.03:0,30,280	0/0:9,0:24:19.59:0,20,266	0/0:30,0:30:38.41:0,38,624	0/0:32,0:32:69.24:0,69,1111	0/0:24,0:24:54.17:0,54,827	0/0:16,0:16:30.10:0,30,482	1/1:10,19:30:48.16:1159,48,0	1/1:10,21:31:57.19:1375,57,0	1/1:9,21:31:63.22:1488,63,0	0/0:41,0:42:93.28:0,93,1426	0/0:35,0:35:75.25:0,75,1185	0/0:35,0:35:66.15:0,66,1010	0/0:21,0:21:51.11:0,51,754	1/1:15,12:30:51.15:1022,51,0	1/1:16,14:32:39.13:905,39,0	1/1:14,22:42:57.19:1378,57,0	1/1:5,18:23:51.18:1231,51,0	0/0:28,0:28:58.91:0,59,967	0/0:44,0:44:96.33:0,96,1551	1/1:6,10:18:24.08:576,24,0	0/0:25,0:25:60.20:0,60,969	0/0:23,0:22:57.19:0,57,919	0/0:13,0:13:32.87:0,33,451
chr10	13398516	.	CTGTGTGTGTGTGTGTGTGTG	C	4761.69	PASS	AB=0.976;AC=20;AF=0.357;AN=56;BaseQRankSum=-5.593;DP=618;FS=14.121;HRun=0;HaplotypeScore=276.1468;InbreedingCoeff=-0.4138;MQ=66.91;MQ0=16;MQRankSum=3.505;QD=11.36;ReadPosRankSum=-0.463;VQSLOD=1.4731;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:23.10:0,23,299	0/1:11,0:11:98.34:98,0,178	0/0:28,0:15:23.18:0,23,339	0/0:33,0:21:22.24:0,22,251	1/1:19,0:19:21.64:281,22,0	0/1:21,0:21:50.91:51,0,333	0/0:35,0:33:0.12:0,0,1	0/1:9,25:34:54.34:744,0,54	0/1:27,0:28:99:305,0,695	0/1:23,0:23:99:454,0,529	0/1:13,0:12:79.95:80,0,429	0/0:16,0:16:37.35:0,37,550	0/0:17,0:15:25.58:0,26,442	0/0:24,0:23:30.82:0,31,579	0/1:38,0:37:99:561,0,254	0/1:22,0:22:99:348,0,253	0/1:21,0:21:99:267,0,1097	0/1:15,0:15:99:105,0,376	0/1:27,0:27:99:306,0,978	0/1:10,0:10:99:126,0,639	0/1:38,0:35:33.62:34,0,207	0/0:11,0:11:8.67:0,9,88	0/1:16,0:15:99:126,0,310	0/1:36,0:36:99:268,0,651	0/0:13,0:13:7.47:0,7,91	0/1:17,0:17:99:371,0,215	0/1:15,0:15:21.72:22,0,234	0/1:15,0:15:99:216,0,654
chr10	13398520	.	G	GTGTA	9798.61	PASS	AB=1.000;AC=37;AF=0.661;AN=56;BaseQRankSum=-2.325;DP=619;FS=2.742;HRun=0;HaplotypeScore=131.3105;InbreedingCoeff=0.8404;MQ=60.43;MQ0=25;MQRankSum=0.737;QD=23.22;ReadPosRankSum=1.065;VQSLOD=4.9000;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:21:28.02:0,28,220	1/1:12,0:12:21:316,21,0	0/0:24,0:11:23.71:0,24,379	0/0:30,0:18:22.24:0,22,264	1/1:17,2:19:27.48:335,27,0	1/1:21,0:21:28.90:229,29,0	0/0:35,0:33:2.33:0,2,19	1/1:34,0:35:95.91:1095,96,0	1/1:24,3:28:36.29:834,36,0	1/1:5,20:24:61.17:909,61,0	1/1:11,1:11:20.63:322,21,0	0/0:17,0:17:38.82:0,39,407	0/0:16,0:14:29.87:0,30,297	0/0:26,0:25:48.22:0,48,402	1/1:33,4:35:59.47:891,59,0	1/1:22,1:23:41.82:641,42,0	1/1:21,1:21:37.93:864,38,0	1/1:13,0:13:10.51:434,11,0	0/1:24,0:24:21.97:317,0,22	1/1:11,0:11:26.94:223,27,0	1/1:39,0:36:5.83:59,6,0	0/0:14,0:13:8.99:0,9,74	1/1:15,2:15:20.88:354,21,0	1/1:36,1:36:53.63:779,54,0	0/0:13,0:12:18.31:0,18,150	1/1:17,0:16:45:545,45,0	1/1:3,11:14:6.49:124,6,0	1/1:14,1:15:32.91:530,33,0
chr10	13398522	.	G	GTA	6489.31	PASS	AB=1.000;AC=37;AF=0.661;AN=56;BaseQRankSum=0.966;DP=618;FS=0.000;HRun=0;HaplotypeScore=121.8992;InbreedingCoeff=0.7966;MQ=59.75;MQ0=31;MQRankSum=2.180;QD=15.45;ReadPosRankSum=2.726;VQSLOD=4.7661;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:21:28.24:0,28,221	1/1:13,0:11:20.97:179,21,0	0/0:24,0:11:23.71:0,24,336	0/0:29,0:18:22.24:0,22,262	1/1:19,0:19:27.43:261,27,0	1/1:18,4:21:30.09:514,30,0	0/0:7,27:32:2.03:0,2,10	1/1:33,0:33:2.52:588,3,0	1/1:28,0:28:34.68:423,35,0	1/1:22,0:21:36.81:409,37,0	1/1:11,0:10:21:187,21,0	0/0:18,0:18:33.49:0,33,372	0/0:15,0:13:29.47:0,29,253	0/0:27,0:26:51.01:0,51,419	1/1:39,0:36:44.14:572,44,0	1/1:23,0:23:34.09:370,34,0	1/1:23,0:22:37.51:410,38,0	0/1:13,0:13:11.26:151,0,11	1/1:23,0:23:4.07:458,4,0	1/1:10,1:11:27.05:410,27,0	1/1:10,29:35:6.02:112,6,0	0/0:14,0:13:8.73:0,9,73	1/1:17,0:15:20.54:223,21,0	1/1:35,0:34:53.63:520,54,0	0/0:13,0:12:18.16:0,18,150	1/1:18,0:17:14.64:341,15,0	1/1:14,0:13:5.87:47,6,0	1/1:16,0:16:14.54:314,15,0
chr10	13398536	.	GTGTGTGTA	G	3208.09	PASS	AB=1.000;AC=37;AF=0.661;AN=56;BaseQRankSum=-1.788;DP=619;FS=0.529;HRun=0;HaplotypeScore=172.2880;InbreedingCoeff=-0.1998;MQ=46.57;MQ0=49;MQRankSum=5.821;QD=5.67;ReadPosRankSum=0.706;VQSLOD=2.1282;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:27:15.31:146,15,0	1/1:11,0:9:13.52:100,14,0	0/0:18,0:7:7.11:0,7,68	0/1:16,0:5:0.99:1,0,9	1/1:22,0:22:14.93:119,15,0	1/1:20,1:18:29.27:249,29,0	0/0:35,0:31:3.89:0,4,26	0/1:43,0:41:99:147,0,124	0/1:27,0:25:99:185,0,161	0/1:21,0:19:99:227,0,110	0/1:11,0:9:16.11:16,0,164	1/1:19,0:18:26.76:369,27,0	1/1:13,0:11:23.20:339,23,0	1/1:28,0:27:34.63:307,35,0	1/1:41,0:37:10.81:244,11,0	0/1:25,0:24:99:114,0,105	0/1:20,0:18:99:134,0,338	0/1:13,0:12:72.13:72,0,159	0/1:21,0:21:60.96:61,0,209	0/1:15,0:14:20.82:21,0,263	0/1:37,0:30:11.93:12,0,85	1/1:6,6:11:5.99:50,6,0	1/1:19,0:17:10.30:75,10,0	0/1:38,0:36:94.59:95,0,241	1/1:16,0:15:10.87:78,11,0	0/1:18,0:16:55.54:119,0,56	0/1:16,0:13:8.50:8,0,94	0/1:13,0:13:85.11:85,0,279
chr10	13398540	.	GTGTA	G	3048.47	PASS	AB=0.993;AC=37;AF=0.661;AN=56;BaseQRankSum=0.067;DP=619;FS=0.000;HRun=0;HaplotypeScore=151.0814;InbreedingCoeff=-0.2029;MQ=45.71;MQ0=51;MQRankSum=6.141;QD=5.36;ReadPosRankSum=-0.316;VQSLOD=2.4239;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:24:14.57:121,15,0	1/1:12,0:10:3.80:91,4,0	0/0:16,0:7:6.88:0,7,68	0/1:13,0:3:0.99:1,0,9	1/1:22,0:21:14.69:119,15,0	1/1:22,1:19:13.56:129,14,0	0/0:34,0:30:3.49:0,3,24	0/1:48,0:46:99:136,0,179	0/1:25,1:24:51.80:195,0,52	0/1:22,0:19:26.95:234,0,27	0/1:11,0:9:16.02:16,0,64	1/1:16,0:15:26.40:271,26,0	1/1:13,0:11:23.58:237,24,0	1/1:28,0:27:35.28:310,35,0	1/1:40,0:36:37.18:313,37,0	0/1:26,0:25:54.50:114,0,54	0/1:21,0:19:99:134,0,124	0/1:16,0:15:27.69:75,0,28	0/1:21,0:21:98.74:99,0,100	0/1:17,0:16:20.91:21,0,128	0/1:35,0:27:11.77:12,0,43	1/1:12,0:11:5.69:49,6,0	1/1:18,0:16:15.85:123,16,0	0/1:38,0:36:95.72:96,0,121	1/1:14,1:14:9.44:78,9,0	0/1:18,0:16:3.10:130,0,3	0/1:18,0:15:12.16:12,0,42	0/1:12,1:13:97.60:98,0,118
chr10	13398583	.	TGAGAGA	T	3662.09	PASS	AB=0.719;AC=26;AF=0.464;AN=56;BaseQRankSum=-3.790;DP=526;FS=1.734;HRun=0;HaplotypeScore=139.1349;InbreedingCoeff=0.4729;MQ=46.86;MQ0=46;MQRankSum=2.251;QD=11.48;ReadPosRankSum=4.148;VQSLOD=2.8389;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:23:3:0,3,28	1/1:12,0:10:11.86:218,12,0	0/0:20,0:9:19.42:0,19,408	0/0:22,0:9:27.04:0,27,659	0/1:11,13:23:20.25:41,0,20	0/0:11,0:20:2.37:0,2,28	0/0:19,0:15:0.02:0,0,1	1/1:12,13:24:16.87:462,17,0	1/1:10,12:19:6.02:116,6,0	1/1:13,0:11:5.06:335,5,0	0/1:7,6:12:0:0,0,0	0/0:13,0:13:20.58:0,21,450	0/0:5,0:10:5.79:0,6,70	0/0:22,0:21:20.73:0,21,552	0/1:14,14:25:0:0,0,0	0/1:9,13:25:1.55:26,0,2	0/1:9,10:17:1.42:51,0,1	0/1:16,0:13:12.60:101,0,13	1/1:2,0:11:19.34:239,19,0	0/1:6,0:19:0:0,0,0	0/0:14,0:10:0.47:0,0,1	0/0:15,0:14:12.04:0,12,317	1/1:12,0:12:18.06:380,18,0	1/1:32,0:30:14.07:505,14,0	0/0:17,0:17:14.19:0,14,412	1/1:11,0:12:33.07:637,33,0	1/1:16,0:14:11.29:370,11,0	0/1:9,0:10:7.93:183,0,8
chr10	13398604	.	GAGAA	G	385.92	PASS	AB=0.964;AC=12;AF=0.214;AN=56;BaseQRankSum=7.112;DP=601;FS=15.966;HRun=0;HaplotypeScore=152.8771;InbreedingCoeff=-0.2457;MQ=62.64;MQ0=21;MQRankSum=-1.538;QD=1.82;ReadPosRankSum=10.505;VQSLOD=0.1339;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:26:23.85:0,24,189	0/1:15,0:14:24.48:24,0,189	0/0:42,0:24:41.62:0,42,647	0/0:52,0:32:73.80:0,74,1150	0/0:19,1:19:36.76:0,37,313	0/0:26,0:23:20.91:0,21,219	0/0:17,0:16:29.79:0,30,226	0/1:24,0:24:38.43:38,0,277	0/1:18,0:17:5.64:6,0,114	0/1:22,0:21:15.74:16,0,282	0/0:14,0:13:23.83:0,24,182	0/0:23,0:23:53.97:0,54,756	0/0:11,0:11:14.71:0,15,152	0/0:24,0:23:50.81:0,51,741	0/0:24,1:22:14.98:0,15,130	0/0:30,1:30:23.88:0,24,245	0/1:15,0:14:3.21:3,0,62	0/1:8,8:15:37.63:38,0,128	0/1:13,0:13:10.69:11,0,106	0/0:19,0:18:27.21:0,27,189	0/0:17,0:16:44.68:0,45,334	0/0:20,0:20:41.93:0,42,632	0/1:21,0:21:18.51:19,0,238	0/1:26,1:24:59.11:134,0,59	0/0:20,0:20:20.74:0,21,439	0/1:20,0:19:72.46:72,0,142	0/1:14,1:15:99:101,0,131	0/1:6,0:6:12.17:71,0,12
chr10	13400261	.	GT	G	10265.99	PASS	AB=0.750;AC=48;AF=0.857;AN=56;BaseQRankSum=1.253;DP=650;FS=6.822;HRun=11;HaplotypeScore=74.0199;InbreedingCoeff=0.7319;MQ=80.14;MQ0=3;MQRankSum=-2.324;QD=17.82;ReadPosRankSum=3.633;VQSLOD=5.8758;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,27:32:68.91:567,69,0	1/1:2,9:11:26.97:222,27,0	0/1:28,0:26:21.67:22,0,177	0/0:30,1:24:18.40:0,18,323	1/1:6,20:26:47.90:394,48,0	0/0:18,1:19:29.62:0,30,512	0/0:21,1:22:26.49:0,26,475	1/1:7,26:35:78.92:624,79,0	1/1:0,18:18:41.95:345,42,0	1/1:2,25:27:74.75:615,75,0	1/1:1,24:25:42.87:550,43,0	1/1:2,21:23:56.93:468,57,0	1/1:3,23:26:59.92:492,60,0	1/1:6,15:21:35.95:296,36,0	1/1:8,24:32:56.79:468,57,0	1/1:2,25:27:68.92:567,69,0	1/1:1,22:23:56.93:468,57,0	1/1:0,9:9:23.97:197,24,0	1/1:6,20:26:59.90:489,60,0	1/1:5,26:31:77.90:640,78,0	1/1:4,12:16:32.94:271,33,0	1/1:4,8:13:23.96:197,24,0	1/1:4,10:14:26.96:221,27,0	1/1:1,15:16:38.95:320,39,0	1/1:1,22:23:33.94:485,34,0	1/1:3,24:27:68.82:557,69,0	1/1:3,30:33:80.89:665,81,0	0/1:3,7:10:5.27:127,0,5
chr10	13400398	.	GAACT	G	8968.93	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=14.868;DP=722;FS=1.104;HRun=0;HaplotypeScore=121.6785;InbreedingCoeff=0.9998;MQ=69.86;MQ0=1;MQRankSum=-2.532;QD=53.71;ReadPosRankSum=3.068;VQSLOD=6.1835;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,50:50:99:2504,120,0	0/0:13,0:13:39.13:0,39,1070	0/0:31,0:27:81.26:0,81,2053	0/0:30,0:22:59.38:0,59,1706	0/0:23,0:23:69.24:0,69,1959	0/0:26,0:26:78.27:0,78,2212	0/0:29,0:29:87.27:0,87,2284	0/0:36,0:36:99:0,108,2655	0/0:30,0:30:87.26:0,87,2364	0/0:26,0:26:78.26:0,78,2188	0/0:10,0:10:30.10:0,30,771	1/1:0,28:28:75.26:1571,75,0	1/1:1,24:25:72.25:1505,72,0	1/1:0,19:19:45.15:942,45,0	0/0:43,0:43:99:0,120,3393	0/0:28,0:28:81.26:0,81,2237	0/0:23,0:23:69.17:0,69,1868	0/0:17,0:17:51.18:0,51,1437	0/0:23,0:23:69.23:0,69,1926	0/0:18,0:18:54.19:0,54,1564	0/0:30,0:30:78.27:0,78,2211	1/1:0,21:21:54.19:1129,54,0	0/0:29,0:29:87.26:0,87,2331	0/0:13,0:13:39.13:0,39,1130	1/1:0,24:24:63.22:1318,63,0	0/0:33,0:33:99:0,99,2808	0/0:32,0:32:93.29:0,93,2491	0/0:12,0:12:36.12:0,36,1043
chr10	13400454	.	CCATA	C	8031.39	PASS	AB=0.595;AC=29;AF=0.537;AN=54;BaseQRankSum=11.934;DP=762;FS=0.000;HRun=0;HaplotypeScore=160.3673;InbreedingCoeff=0.8323;MQ=64.07;MQ0=7;MQRankSum=-0.497;QD=18.99;ReadPosRankSum=3.007;VQSLOD=4.0708;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:63.19:0,63,1473	0/0:9,0:9:12.04:0,12,283	0/0:31,0:19:0.89:0,1,2	./.	1/1:8,13:21:36.12:560,36,0	0/0:10,0:21:21.04:0,21,308	0/0:23,0:23:18.50:0,19,246	1/1:26,0:26:2.80:13,3,0	1/1:12,23:36:69.23:1056,69,0	0/0:35,0:35:69.24:0,69,1620	0/0:14,0:14:33.11:0,33,764	0/0:35,0:36:66.23:0,66,1531	0/0:31,0:31:66.23:0,66,1546	0/0:21,0:21:36.12:0,36,838	1/1:19,31:50:81.28:1261,81,0	0/1:14,30:43:10.44:1130,0,10	1/1:10,22:33:60.20:915,60,0	1/1:7,7:13:18.06:280,18,0	1/1:23,0:30:20.81:164,21,0	1/1:5,0:22:18.47:102,18,0	1/1:12,0:21:3:28,3,0	0/0:23,0:23:42.14:0,42,990	1/1:17,14:31:23.41:373,23,0	1/1:7,9:16:24.08:374,24,0	0/0:22,0:22:24.08:0,24,566	1/1:15,16:31:48.16:747,48,0	1/1:16,22:38:60.20:934,60,0	1/1:8,2:10:6.02:93,6,0
chr10	13400940	.	T	TTTTTG	1394.04	PASS	AB=0.783;AC=6;AF=0.107;AN=56;BaseQRankSum=-1.367;DP=569;FS=2.422;HRun=0;HaplotypeScore=108.8598;InbreedingCoeff=0.5374;MQ=59.07;MQ0=12;MQRankSum=-0.547;QD=17.21;ReadPosRankSum=5.120;VQSLOD=3.2573;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:8.76:0,9,175	0/0:9,0:9:2.78:0,3,27	0/0:56,0:13:28.16:0,28,235	0/0:32,0:6:0.46:0,0,8	0/0:19,0:19:21.23:0,21,130	0/1:19,0:19:12.58:13,0,133	0/0:16,0:16:15.75:0,16,106	0/0:32,0:29:66.11:0,66,503	0/0:12,0:12:28.13:0,28,256	0/0:14,0:14:17.03:0,17,173	0/0:18,0:18:3.57:0,4,24	0/0:18,0:18:13.06:0,13,158	0/0:18,0:17:18.19:0,18,108	0/0:16,0:16:23.27:0,23,160	0/0:26,0:26:8.90:0,9,60	0/0:16,0:16:34.93:0,35,311	0/0:23,0:21:39.85:0,40,277	0/0:25,0:25:42.91:0,43,367	1/1:10,1:20:24.81:522,25,0	1/1:8,16:29:35.04:756,35,0	0/1:3,6:13:0.47:236,0,0	0/0:8,0:8:20.90:0,21,154	0/0:2,0:2:2.97:0,3,20	0/0:11,0:11:16.36:0,16,123	0/0:17,0:17:21.36:0,21,231	0/0:30,0:30:53.52:0,54,473	0/0:20,0:20:27.34:0,27,178	0/0:15,0:15:17.46:0,17,107
chr10	13400948	.	TTG	T	4326.31	PASS	AB=1.000;AC=36;AF=0.643;AN=56;BaseQRankSum=-5.101;DP=558;FS=25.571;HRun=0;HaplotypeScore=62.5000;InbreedingCoeff=0.5859;MQ=56.15;MQ0=12;MQRankSum=0.733;QD=10.98;ReadPosRankSum=-5.370;VQSLOD=1.9963;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:35.06:0,35,299	1/1:8,0:8:5.92:39,6,0	0/0:46,0:11:17.89:0,18,150	0/1:27,0:5:14.77:15,0,19	1/1:20,1:21:52.68:393,53,0	0/1:16,0:16:46.39:46,0,180	0/0:16,0:16:22.94:0,23,174	1/1:34,1:31:73.12:558,73,0	1/1:12,1:13:24.54:220,25,0	1/1:15,1:16:39.69:307,40,0	1/1:19,0:19:27.41:163,27,0	0/0:14,0:14:12.24:0,12,256	0/0:18,0:17:12.75:0,13,96	0/0:15,0:15:12.21:0,12,239	1/1:28,1:29:8.90:59,9,0	1/1:13,2:15:41.21:323,41,0	1/1:20,2:20:35.57:283,36,0	1/1:25,1:26:62.36:513,62,0	0/1:23,0:23:35.82:36,0,314	0/1:28,0:28:2.67:3,0,383	0/1:11,0:11:1.25:1,0,162	0/1:8,0:8:0.22:0,0,104	1/1:2,0:2:1.25:3,1,0	1/1:9,1:10:20.96:179,21,0	0/0:18,0:18:24.70:0,25,279	1/1:23,2:25:69.32:571,69,0	1/1:21,1:22:53.41:374,53,0	1/1:15,2:17:35.16:240,35,0
chr10	13400949	.	TG	T	4852.81	PASS	AB=0.993;AC=39;AF=0.696;AN=56;BaseQRankSum=-2.854;DP=536;FS=85.303;HRun=1;HaplotypeScore=52.7287;InbreedingCoeff=0.2722;MQ=56.71;MQ0=12;MQRankSum=-0.677;QD=11.67;ReadPosRankSum=-4.370;VQSLOD=0.8868;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:35.53:0,36,261	1/1:0,8:8:6.39:39,6,0	0/0:44,1:11:17.38:0,17,144	0/1:26,2:6:25.40:25,0,43	1/1:19,3:22:56.69:440,57,0	0/1:16,0:16:62.23:62,0,122	0/0:16,0:16:15.99:0,16,139	1/1:29,3:29:79.36:595,79,0	1/1:11,0:11:29.33:234,29,0	1/1:1,14:15:38.88:310,39,0	1/1:0,19:19:32.61:215,33,0	0/1:14,0:14:8.37:8,0,163	0/1:16,0:15:29.42:29,0,43	0/1:15,0:15:13.34:13,0,155	1/1:1,28:29:8.90:59,9,0	1/1:14,1:15:41.86:349,42,0	1/1:20,2:20:49.69:357,50,0	1/1:23,3:26:70.64:586,71,0	0/1:18,0:18:20.83:21,0,262	0/0:26,0:26:9.10:0,9,335	0/1:11,0:11:6.21:6,0,113	0/1:8,0:8:7.95:8,0,88	1/1:0,2:2:2.97:20,3,0	1/1:11,0:11:23.92:192,24,0	0/1:17,0:17:3.56:4,0,198	1/1:23,2:25:74.10:612,74,0	1/1:19,0:19:53.70:414,54,0	1/1:16,1:17:35.95:254,36,0
chr10	13401794	.	C	CA	3103.26	PASS	AB=0.746;AC=28;AF=0.500;AN=56;BaseQRankSum=12.988;DP=650;FS=11.236;HRun=0;HaplotypeScore=192.1340;InbreedingCoeff=0.5974;MQ=62.97;MQ0=3;MQRankSum=-13.309;QD=9.55;ReadPosRankSum=2.594;VQSLOD=3.1101;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,105,454	1/1:2,5:6:16.11:111,16,0	0/0:26,0:18:48.03:0,48,593	0/0:35,0:28:70.17:0,70,887	1/1:5,15:18:3.55:116,4,0	0/0:14,0:14:36.76:0,37,154	0/0:29,0:29:25.04:0,25,224	0/1:12,10:22:15.69:186,0,16	1/1:7,12:19:19.26:183,19,0	1/1:11,20:31:29.26:438,29,0	1/1:5,12:17:8.31:144,8,0	0/0:36,0:36:41.87:0,42,310	0/0:25,0:25:40:0,40,247	0/0:25,0:25:36.45:0,36,228	1/1:9,26:35:79.36:525,79,0	1/1:11,15:26:29.41:290,29,0	1/1:11,17:28:48.76:361,49,0	0/1:8,9:17:16.60:136,0,17	0/1:21,0:21:43.49:43,0,60	0/0:15,0:15:12.39:0,12,127	0/0:34,0:34:54.90:0,55,288	0/0:22,0:22:50.86:0,51,235	1/1:8,4:10:8.87:75,9,0	1/1:10,12:21:2.97:111,3,0	0/0:23,0:23:1.27:0,1,165	1/1:9,9:18:2.89:223,3,0	1/1:5,16:21:40.90:303,41,0	0/1:4,5:8:11.43:64,0,11
chr10	13401795	.	C	CACA	7806.81	PASS	AB=0.684;AC=26;AF=0.464;AN=56;BaseQRankSum=11.362;DP=649;FS=9.574;HRun=0;HaplotypeScore=198.0196;InbreedingCoeff=0.7124;MQ=63.19;MQ0=3;MQRankSum=-12.925;QD=25.85;ReadPosRankSum=1.092;VQSLOD=4.2933;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:96.04:0,96,850	1/1:2,4:6:17.89:237,18,0	0/0:26,0:18:51.14:0,51,836	0/0:36,0:29:72.14:0,72,1200	1/1:5,15:18:9.51:331,10,0	0/0:14,0:14:41.57:0,42,343	0/0:30,0:30:18.83:0,19,510	0/1:12,10:22:48.13:457,0,48	1/1:7,12:19:27.19:604,27,0	1/1:11,18:31:26:933,26,0	1/1:5,12:17:23.21:405,23,0	0/0:38,0:38:77.69:0,78,782	0/0:25,0:25:53.84:0,54,535	0/0:25,0:25:54.95:0,55,559	1/1:8,25:34:74.62:1137,75,0	1/1:11,15:26:30.79:702,31,0	1/1:10,15:27:51.17:758,51,0	0/1:8,9:17:6.55:437,0,7	0/0:21,0:21:23.56:0,24,234	0/0:14,0:14:33.15:0,33,292	0/0:33,0:33:28.65:0,29,516	0/0:22,0:22:56.63:0,57,504	0/1:8,4:10:3.24:157,0,3	1/1:10,11:21:8.26:274,8,0	0/0:22,0:22:45.45:0,45,460	1/1:9,9:18:4.91:519,5,0	1/1:5,14:21:45.15:697,45,0	0/1:4,5:8:19.53:159,0,20
chr10	13401869	.	T	TG	2813.03	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-8.561;DP=713;FS=1.443;HRun=6;HaplotypeScore=97.0549;InbreedingCoeff=0.9988;MQ=79.60;MQ0=0;MQRankSum=0.738;QD=32.71;ReadPosRankSum=0.370;VQSLOD=3.2169;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,105,1071	0/0:14,0:14:42.09:0,42,427	0/0:22,0:22:43.69:0,44,432	0/0:20,0:20:43.77:0,44,385	0/0:28,0:28:72.16:0,72,734	0/0:14,0:14:36.08:0,36,367	0/0:29,0:29:75.17:0,75,765	0/0:25,0:25:60.12:0,60,602	0/0:28,0:28:81.18:0,81,826	0/0:36,0:36:99:0,99,1005	0/0:13,0:13:24.05:0,24,245	0/0:49,0:49:99:0,135,1371	0/0:23,0:23:63.14:0,63,643	0/0:28,0:28:78.15:0,78,787	0/0:27,0:27:72.11:0,72,712	0/0:39,0:39:99:0,110,1101	0/0:23,0:23:57.09:0,57,572	0/0:15,0:15:42.10:0,42,428	1/1:2,21:23:63.19:781,63,0	1/1:1,15:16:42.13:528,42,0	1/1:2,45:47:99:1646,132,0	0/0:22,0:22:45.08:0,45,459	0/0:22,0:22:60.14:0,60,612	0/0:21,0:20:54.12:0,54,551	0/0:20,0:20:54.12:0,54,551	0/0:29,0:29:84.19:0,84,857	0/0:26,0:26:63.14:0,63,643	0/0:12,0:12:27.05:0,27,275
chr10	13402586	.	CAAAAAA	C	4466.63	PASS	AB=0.713;AC=27;AF=0.482;AN=56;BaseQRankSum=4.604;DP=607;FS=3.451;HRun=19;HaplotypeScore=135.7956;InbreedingCoeff=0.7109;MQ=75.18;MQ0=9;MQRankSum=-8.087;QD=17.18;ReadPosRankSum=7.351;VQSLOD=0.1930;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:38:44.15:0,44,1048	1/1:3,5:9:11.87:181,12,0	0/0:62,0:25:39.03:0,39,576	0/0:51,0:23:1.61:0,2,298	1/1:4,5:9:2.31:48,2,0	0/0:8,0:15:38.01:0,38,400	0/0:9,0:16:24.94:0,25,258	0/1:13,5:19:20.87:161,0,21	1/1:6,13:20:23.60:377,24,0	1/1:12,6:18:17.07:294,17,0	1/1:3,5:8:8.49:147,8,0	0/0:26,0:26:57.19:0,57,1488	0/0:25,0:25:57.19:0,57,1461	0/0:21,0:20:48.16:0,48,1130	1/1:9,10:21:29.14:458,29,0	1/1:12,10:25:21.89:405,22,0	1/1:12,13:28:22.34:327,22,0	1/1:3,14:18:18.58:596,19,0	0/0:12,0:12:24.08:0,24,589	0/0:18,0:19:36.11:0,36,855	0/0:19,0:21:48.13:0,48,1125	0/0:21,0:21:33.11:0,33,866	0/1:3,4:7:19.02:42,0,19	1/1:9,11:21:17:284,17,0	0/0:18,0:17:33.11:0,33,877	0/1:16,4:26:59.30:304,0,59	1/1:8,12:22:38.64:599,39,0	1/1:2,5:9:17.61:245,18,0
chr10	13404296	.	CTGG	C	107.29	PASS	AB=1.000;AC=13;AF=0.250;AN=52;BaseQRankSum=5.120;DP=265;FS=26.741;HRun=0;HaplotypeScore=46.0610;InbreedingCoeff=0.3572;MQ=59.73;MQ0=8;MQRankSum=-3.572;QD=1.45;ReadPosRankSum=1.076;VQSLOD=0.1731;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,12:12:3.01:52,3,0	./.	0/0:21,0:8:1.85:0,2,129	0/0:15,0:9:19.26:0,19,266	0/0:8,0:6:1.50:0,1,23	0/0:7,0:7:6.01:0,6,63	0/0:9,0:8:11.96:0,12,96	0/0:10,0:10:26.93:0,27,232	0/0:10,0:10:16.14:0,16,95	0/0:5,0:5:9.48:0,9,83	0/0:4,0:4:1.82:0,2,5	1/1:9,0:9:8.78:55,9,0	1/1:9,0:8:3.83:19,4,0	1/1:7,0:6:2.81:20,3,0	0/0:11,0:11:8.82:0,9,61	0/0:13,0:13:16.02:0,16,141	0/0:26,0:26:36.35:0,36,242	0/0:15,0:14:31.36:0,31,221	0/1:12,0:12:10.24:10,0,139	0/1:6,0:6:3.66:41,0,4	0/1:10,0:10:33.60:37,0,34	./.	0/1:4,0:4:2.83:9,0,3	0/0:13,0:12:10.13:0,10,48	0/1:5,0:5:0:0,0,0	0/0:8,0:8:23.49:0,23,170	0/0:13,0:13:10.97:0,11,143	0/0:1,0:1:2.98:0,3,21
chr10	13404313	.	G	GAA	5665.77	PASS	AC=34;AF=0.630;AN=54;BaseQRankSum=-0.143;DP=278;FS=15.868;HRun=1;HaplotypeScore=46.8740;InbreedingCoeff=0.9234;MQ=60.27;MQ0=1;MQRankSum=-0.822;QD=33.13;ReadPosRankSum=2.258;VQSLOD=3.4853;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:24.04:0,24,280	1/1:1,0:1:3.01:40,3,0	0/0:19,0:9:15.05:0,15,197	0/0:16,0:11:29.34:0,29,337	1/1:6,0:6:12.02:156,12,0	0/0:7,0:8:20.93:0,21,164	0/0:12,0:12:35.84:0,36,275	1/1:0,22:23:66.22:984,66,0	1/1:11,0:11:26.98:375,27,0	1/1:1,3:4:9.03:137,9,0	1/1:5,0:5:15.04:209,15,0	0/0:9,0:9:24.08:0,24,318	0/0:4,0:4:9.91:0,10,115	0/0:14,0:14:33.07:0,33,440	1/1:11,0:11:24.95:312,25,0	1/1:8,0:8:18.03:245,18,0	1/1:25,0:25:69.60:946,70,0	1/1:12,0:12:30.09:405,30,0	1/1:7,0:8:18.03:175,18,0	1/1:7,0:9:23.94:208,24,0	1/1:9,0:9:20.99:188,21,0	0/0:5,0:5:6.02:0,6,81	1/1:10,0:10:27.05:354,27,0	1/1:13,0:12:30.09:419,30,0	0/0:7,0:7:21.07:0,21,285	1/1:6,0:6:14.94:198,15,0	1/1:9,0:9:24.05:315,24,0	./.
chr10	13404563	.	A	AAATT	17165.08	PASS	AB=1.000;AC=49;AF=0.875;AN=56;BaseQRankSum=-3.408;DP=487;FS=2.030;HRun=0;HaplotypeScore=79.2990;InbreedingCoeff=0.6913;MQ=52.96;MQ0=18;MQRankSum=-5.773;QD=39.64;ReadPosRankSum=1.107;VQSLOD=4.7602;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,1:24:39.44:737,39,0	1/1:2,5:6:11.96:188,12,0	0/0:15,0:10:0.62:0,1,105	0/1:12,0:6:12.09:12,0,26	1/1:8,12:16:36.12:734,36,0	0/0:16,0:16:48.16:0,48,776	0/0:23,0:22:54.17:0,54,867	1/1:4,35:40:99:2451,114,0	1/1:3,10:12:24.04:530,24,0	1/1:1,14:18:54.18:1184,54,0	1/1:6,3:10:18.01:372,18,0	1/1:4,1:16:20.96:360,21,0	1/1:9,0:17:26.94:431,27,0	1/1:5,0:15:12.04:230,12,0	1/1:3,17:20:45.15:1011,45,0	1/1:7,12:18:42.14:973,42,0	1/1:4,25:28:60.20:1423,60,0	1/1:6,16:19:51.15:1115,51,0	1/1:7,0:13:36.03:568,36,0	1/1:4,0:17:29.96:498,30,0	1/1:4,0:6:3.01:58,3,0	1/1:2,0:9:20.98:305,21,0	1/1:2,12:15:33.07:756,33,0	1/1:1,11:12:21.07:516,21,0	1/1:4,0:17:30.94:546,31,0	1/1:5,13:19:51.17:1141,51,0	1/1:5,9:17:27.77:582,28,0	1/1:3,5:8:21.04:445,21,0
chr10	13405259	.	GT	G	1326.91	PASS	AB=1.000;AC=10;AF=0.179;AN=56;BaseQRankSum=12.498;DP=614;FS=4.841;HRun=3;HaplotypeScore=65.5041;InbreedingCoeff=0.7163;MQ=62.16;MQ0=4;MQRankSum=-0.064;QD=10.79;ReadPosRankSum=1.742;VQSLOD=1.4632;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,117,1639	0/0:8,0:8:24.08:0,24,340	0/1:17,0:7:13.32:13,0,61	0/0:15,0:6:16.95:0,17,172	0/0:19,0:19:54.18:0,54,769	1/1:0,19:19:48.15:595,48,0	1/1:1,25:26:51.25:834,51,0	0/0:40,0:39:99:0,114,1552	0/0:19,0:19:57.18:0,57,802	0/0:17,0:17:51.17:0,51,730	0/0:11,0:11:30.09:0,30,410	0/0:26,0:26:78.23:0,78,1064	0/0:27,0:27:78.22:0,78,1095	0/0:16,0:16:45.14:0,45,626	0/0:46,0:46:99:0,129,1834	0/0:24,0:24:69.23:0,69,993	0/0:31,0:31:90.17:0,90,1161	0/0:23,0:22:69.21:0,69,974	1/1:10,0:10:4.71:10,5,0	1/1:23,0:23:8.95:19,9,0	0/1:28,0:28:8.94:9,0,26	0/0:15,0:15:45.13:0,45,608	0/0:14,0:14:42.14:0,42,604	0/0:20,0:20:54.17:0,54,755	0/0:23,0:23:69.23:0,69,993	0/0:28,0:28:81.24:0,81,1108	0/0:14,0:14:42.12:0,42,584	0/0:13,0:13:39.12:0,39,535
chr10	13405261	.	TTC	T	2091.06	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=7.821;DP=610;FS=10.797;HRun=0;HaplotypeScore=73.9883;InbreedingCoeff=0.9132;MQ=61.67;MQ0=5;MQRankSum=0.432;QD=34.28;ReadPosRankSum=0.860;VQSLOD=5.5445;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,114,2057	0/0:8,0:8:21.05:0,21,354	0/0:16,0:4:0.53:0,1,98	0/0:17,0:6:18.05:0,18,251	0/0:19,0:19:54.19:0,54,987	0/0:19,0:19:42.85:0,43,173	0/0:26,0:26:64.61:0,65,286	0/0:40,0:39:99:0,105,1866	0/0:19,0:19:57.20:0,57,1044	0/0:17,0:17:48.16:0,48,880	0/0:11,0:11:24.08:0,24,440	0/0:26,0:26:75.23:0,75,1312	0/0:26,0:26:75.15:0,75,1217	0/0:17,0:17:48.16:0,48,867	0/0:43,0:43:99:0,123,2224	0/0:24,0:24:72.23:0,72,1289	0/0:32,0:32:87.30:0,87,1581	0/0:23,0:22:69.24:0,69,1264	1/1:0,10:10:30.10:430,30,0	1/1:0,23:23:63.14:858,63,0	1/1:2,26:28:66.22:945,66,0	0/0:15,0:15:42.14:0,42,766	0/0:14,0:14:42.14:0,42,769	0/0:19,0:19:51.16:0,51,902	0/0:23,0:23:69.22:0,69,1228	0/0:27,0:27:72.23:0,72,1262	0/0:15,0:15:42.13:0,42,739	0/0:13,0:13:33.11:0,33,604
chr10	13405387	.	TAA	T	5189	PASS	AB=1.000;AC=31;AF=0.554;AN=56;BaseQRankSum=2.241;DP=648;FS=0.000;HRun=16;HaplotypeScore=84.2800;InbreedingCoeff=0.9601;MQ=76.17;MQ0=12;MQRankSum=-0.905;QD=13.66;ReadPosRankSum=6.693;VQSLOD=3.8852;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:42:76.57:0,77,1090	1/1:3,5:8:11.94:100,12,0	0/0:42,0:17:21.02:0,21,212	0/1:32,0:15:0.07:0,0,1	1/1:4,19:28:41.16:449,41,0	0/0:5,0:18:24.03:0,24,228	0/0:9,0:16:24.04:0,24,260	1/1:14,17:31:44.71:374,45,0	1/1:5,9:15:20.68:162,21,0	1/1:7,24:33:65.41:579,65,0	1/1:6,14:21:26.53:225,27,0	0/0:22,0:22:45.13:0,45,571	0/0:11,0:12:23.34:0,23,277	0/0:21,1:25:10.63:0,11,475	1/1:6,22:30:44.14:404,44,0	1/1:5,19:27:39.53:322,40,0	1/1:6,21:28:50.26:412,50,0	1/1:2,11:14:32.67:263,33,0	0/0:10,0:17:44.83:0,45,458	0/0:6,0:23:57.04:0,57,554	0/0:7,0:14:18.50:0,19,193	0/0:15,0:16:35.46:0,35,423	1/1:4,18:22:38.38:325,38,0	1/1:3,30:32:77.90:652,78,0	0/0:16,1:19:22.41:0,22,521	1/1:8,18:26:53.86:447,54,0	1/1:5,13:18:29.81:250,30,0	1/1:3,11:13:26.88:226,27,0
chr10	13408582	.	T	TC	6988.89	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-12.362;DP=782;FS=0.000;HRun=4;HaplotypeScore=75.3570;InbreedingCoeff=0.9898;MQ=73.27;MQ0=0;MQRankSum=-0.253;QD=36.78;ReadPosRankSum=1.467;VQSLOD=4.9101;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,35:40:99:1436,105,0	0/0:14,0:14:42.12:0,42,476	0/0:16,0:16:20.76:0,21,310	0/0:12,0:12:10.61:0,11,223	0/0:20,0:20:56.89:0,57,618	0/0:25,0:25:69.18:0,69,773	0/0:25,0:25:60.17:0,60,680	0/0:33,0:33:87.21:0,87,967	0/0:35,0:35:99:0,102,1157	0/0:27,0:27:81.21:0,81,901	0/0:16,0:16:48.14:0,48,544	1/1:3,44:47:99:1758,129,0	1/1:1,28:29:78.24:1048,78,0	1/1:1,37:38:99:1394,102,0	0/0:52,0:52:99:0,150,1691	0/0:37,0:37:99:0,105,1168	0/0:33,0:33:87.18:0,87,943	0/0:35,0:35:99:0,102,1133	0/0:28,0:28:78.21:0,78,875	0/0:15,0:15:36.10:0,36,408	0/0:62,0:62:99:0,174,1973	1/1:0,22:22:60.20:820,60,0	0/0:16,0:16:45.13:0,45,510	0/0:43,0:43:99:0,114,1279	1/1:1,13:14:39.13:533,39,0	0/0:19,0:19:57.16:0,57,646	0/0:22,0:22:66.19:0,66,747	0/0:7,0:7:21.03:0,21,226
chr10	13411812	.	AAAAAAAAAAAG	A	8249.25	PASS	AB=0.981;AC=22;AF=0.393;AN=56;BaseQRankSum=11.846;DP=650;FS=2.590;HRun=0;HaplotypeScore=209.8761;InbreedingCoeff=0.4091;MQ=56.60;MQ0=13;MQRankSum=-6.282;QD=23.98;ReadPosRankSum=6.611;VQSLOD=3.8608;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:18:27.09:0,27,778	0/1:7,1:8:4.06:258,0,4	0/0:53,0:9:18.98:0,19,276	0/0:39,0:15:19.80:0,20,525	1/1:39,0:39:60.18:1349,60,0	0/0:22,0:21:60.15:0,60,1664	0/0:15,0:15:40.37:0,40,930	1/1:31,1:31:4.68:786,5,0	1/1:17,0:17:29.97:548,30,0	0/1:23,1:23:5.56:598,0,6	1/1:27,0:27:53.68:760,54,0	0/0:28,0:27:60.21:0,60,1714	0/0:27,0:27:59.79:0,60,1607	0/0:12,0:12:21.07:0,21,533	0/1:26,0:26:2.67:686,0,3	1/1:32,0:32:24.70:751,25,0	0/1:27,0:27:13.24:321,0,13	0/1:19,0:19:21.51:400,0,22	0/0:20,0:20:57.19:0,57,1900	0/0:20,0:20:48.15:0,48,1435	0/0:9,0:8:24.08:0,24,959	0/0:17,0:17:51.17:0,51,1204	1/1:19,0:19:1.11:294,1,0	0/1:12,0:12:43.96:120,0,44	0/0:24,0:24:42.14:0,42,1242	0/1:26,0:26:33.86:561,0,34	0/1:19,0:19:47.76:253,0,48	1/1:16,1:17:10.31:566,10,0
chr10	13411813	.	AAAAAAAAAAG	A	12761.38	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=7.524;DP=648;FS=1.634;HRun=0;HaplotypeScore=185.9594;InbreedingCoeff=0.9820;MQ=58.40;MQ0=13;MQRankSum=-5.487;QD=37.64;ReadPosRankSum=5.173;VQSLOD=4.3739;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:18:27.08:0,27,663	1/1:3,5:8:14.73:338,15,0	0/0:53,0:10:21.46:0,21,249	0/0:39,0:16:9.07:0,9,449	1/1:5,34:39:99:2052,101,0	0/0:22,0:21:60.14:0,60,1451	0/0:15,0:15:39.94:0,40,778	1/1:22,9:30:68.37:1248,68,0	1/1:2,14:16:30.10:823,30,0	1/1:7,16:22:43.35:949,43,0	1/1:5,22:27:60.25:1158,60,0	0/0:29,0:28:60.15:0,60,1476	0/0:27,0:27:59.40:0,59,1366	0/0:12,0:12:21.07:0,21,444	1/1:14,11:25:59.36:1127,59,0	1/1:8,23:31:42.10:1113,42,0	1/1:7,20:27:20.31:514,20,0	1/1:13,6:19:31.90:610,32,0	0/0:20,0:20:57.17:0,57,1702	0/0:21,0:21:51.12:0,51,1299	0/0:9,0:8:24.08:0,24,846	0/0:17,0:17:51.15:0,51,996	1/1:6,13:19:17.36:434,17,0	1/1:10,2:12:18.22:269,18,0	0/0:24,0:24:42.14:0,42,1069	1/1:8,18:26:23.57:892,24,0	1/1:8,11:19:14.10:415,14,0	1/1:3,14:17:29.82:818,30,0
chr10	13411814	.	AAAAAAAAAG	A	10321.73	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=9.298;DP=610;FS=3.769;HRun=0;HaplotypeScore=174.8013;InbreedingCoeff=0.9867;MQ=60.92;MQ0=13;MQRankSum=-5.667;QD=34.18;ReadPosRankSum=5.263;VQSLOD=4.1695;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:17:27.07:0,27,574	1/1:7,0:7:14.89:275,15,0	0/0:52,0:11:24.39:0,24,282	0/0:39,0:17:11.49:0,11,436	1/1:36,1:37:99:1612,102,0	0/0:22,0:21:57.14:0,57,1314	0/0:15,0:15:36.92:0,37,690	1/1:26,3:28:74.28:1103,74,0	1/1:15,1:16:30.10:631,30,0	1/1:21,0:20:49.39:765,49,0	1/1:24,0:24:61.21:909,61,0	0/0:29,0:28:60.12:0,60,1288	0/0:27,0:27:58.50:0,58,1166	0/0:12,0:12:21.03:0,21,369	1/1:25,0:25:59.51:916,60,0	1/1:26,2:28:42.50:903,43,0	1/1:22,1:23:20.98:400,21,0	1/1:17,0:17:35.99:536,36,0	0/0:20,0:20:57.17:0,57,1538	0/0:21,0:21:51.11:0,51,1185	0/0:9,0:8:24.08:0,24,739	0/0:17,0:17:51.09:0,51,876	1/1:14,0:14:17.06:336,17,0	1/1:9,0:9:20.77:255,21,0	0/0:24,0:24:42.14:0,42,913	1/1:22,0:22:42.18:722,42,0	1/1:14,1:15:14.71:320,15,0	1/1:15,0:15:30.10:640,30,0
chr10	13411815	.	AAAAAAAAGAG	A	9327.32	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=11.278;DP=599;FS=5.623;HRun=0;HaplotypeScore=183.4209;InbreedingCoeff=0.9224;MQ=61.12;MQ0=13;MQRankSum=-4.937;QD=31.94;ReadPosRankSum=7.148;VQSLOD=3.3477;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:17:24.02:0,24,540	1/1:6,0:6:13.29:251,13,0	0/0:51,0:11:21.93:0,22,345	0/0:41,0:17:0.90:0,1,518	1/1:36,0:36:80.64:1494,81,0	0/0:22,0:20:60.10:0,60,1413	0/0:14,0:14:30.28:0,30,643	1/1:30,0:29:21.88:744,22,0	1/1:15,1:16:30.10:711,30,0	1/1:19,2:20:38.60:696,39,0	1/1:24,0:24:47.95:852,48,0	0/0:29,0:28:54.04:0,54,1227	0/0:27,0:27:57.61:0,58,1142	0/0:12,0:12:20.98:0,21,291	1/1:24,0:24:27.86:764,28,0	1/1:26,1:27:42.62:900,43,0	1/1:21,1:22:21.04:431,21,0	1/1:16,0:16:13.34:398,13,0	0/0:20,0:20:57.20:0,57,1543	0/0:21,0:21:48.15:0,48,1285	0/0:9,0:8:24.08:0,24,723	0/0:17,0:17:47.38:0,47,804	1/1:13,0:13:14.72:336,15,0	1/1:7,0:7:1.09:133,1,0	0/0:25,0:25:42.08:0,42,857	1/1:21,0:21:30.38:651,30,0	1/1:14,0:14:14.88:331,15,0	1/1:15,0:15:30.10:636,30,0
chr10	13411819	.	A	AG	314.21	PASS	AB=0.851;AC=7;AF=0.125;AN=56;BaseQRankSum=-1.527;DP=571;FS=24.389;HRun=0;HaplotypeScore=146.3034;InbreedingCoeff=0.2161;MQ=60.49;MQ0=11;MQRankSum=2.408;QD=2.51;ReadPosRankSum=1.366;VQSLOD=1.5835;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:9,11:18:6.23:66,0,6	0/0:6,0:6:12.45:0,12,53	0/0:42,0:10:10.73:0,11,112	0/0:35,0:15:9.24:0,9,141	0/0:36,0:36:74.78:0,75,343	0/0:21,0:19:52.52:0,53,330	0/0:10,0:10:20.39:0,20,124	0/0:31,0:30:79.96:0,80,512	0/0:16,0:16:24.09:0,24,84	0/0:20,0:19:29.24:0,29,163	0/0:24,0:24:47.57:0,48,252	0/1:25,1:25:54.20:68,0,54	0/1:28,0:28:54.52:69,0,55	0/1:11,0:11:6.88:7,0,14	0/0:23,0:23:58.92:0,59,358	0/0:27,0:27:33.57:0,34,118	0/0:22,0:22:8.16:0,8,54	0/0:15,0:15:38.22:0,38,230	0/0:21,0:21:56.41:0,56,403	0/0:21,0:21:46.46:0,46,309	0/0:9,0:8:23.17:0,23,145	1/1:16,0:16:19.94:182,20,0	0/0:13,0:13:15.38:0,15,63	0/0:8,0:8:20.21:0,20,150	0/1:11,13:24:55.30:55,0,63	0/0:19,0:19:35.96:0,36,187	0/0:12,0:12:11.86:0,12,41	0/0:15,0:15:23.84:0,24,81
chr10	13411821	.	A	AGAG	1446.74	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=-7.390;DP=552;FS=35.273;HRun=0;HaplotypeScore=162.8108;InbreedingCoeff=0.8432;MQ=62.29;MQ0=9;MQRankSum=1.239;QD=11.22;ReadPosRankSum=1.302;VQSLOD=1.2482;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,3:16:15.03:205,15,0	0/0:6,0:6:14.92:0,15,122	0/0:43,0:12:14.81:0,15,182	0/0:32,0:16:27.25:0,27,246	0/0:36,0:36:89.56:0,90,762	0/1:21,0:19:5.71:6,0,30	0/0:8,0:8:6.52:0,7,15	0/0:35,0:34:96.64:0,97,905	0/0:16,0:16:29.73:0,30,208	0/0:20,0:19:37.81:0,38,323	0/0:24,0:24:59.88:0,60,545	1/1:9,13:22:21.05:348,21,0	1/1:9,14:26:20.67:385,21,0	1/1:1,8:10:3.01:57,3,0	0/0:22,0:22:62.77:0,63,570	0/0:27,0:27:41.68:0,42,299	0/0:22,0:22:19.72:0,20,150	0/0:15,0:15:41.93:0,42,409	0/0:20,0:20:48.05:0,48,353	0/0:22,0:22:46.56:0,47,462	0/0:9,0:8:17.92:0,18,131	1/1:12,0:12:29.20:476,29,0	0/0:13,0:13:18.36:0,18,143	0/0:8,0:8:23.99:0,24,236	1/1:18,1:19:12.64:148,13,0	0/0:18,0:18:43.61:0,44,387	0/0:12,0:12:14.88:0,15,106	0/0:15,0:15:29.77:0,30,213
chr10	13412858	.	ACG	A	27746.86	PASS	AB=0.964;AC=42;AF=0.750;AN=56;BaseQRankSum=-18.638;DP=1191;FS=1.308;HRun=0;HaplotypeScore=193.4237;InbreedingCoeff=0.4286;MQ=65.54;MQ0=13;MQRankSum=-2.752;QD=28.52;ReadPosRankSum=1.049;VQSLOD=5.5443;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:41,2:43:71.07:71,0,724	1/1:0,18:18:48.16:725,48,0	0/0:54,0:43:94.14:0,94,1805	0/0:47,0:41:99:0,100,1525	1/1:0,25:23:60.20:917,60,0	0/1:25,1:26:79.74:80,0,363	0/1:27,3:30:82.32:82,0,500	1/1:3,43:46:99:1760,132,0	1/1:0,49:49:99:1789,117,0	1/1:1,43:44:99:1859,129,0	1/1:0,20:20:48.16:733,48,0	0/0:78,1:79:79.50:0,79,1595	0/1:47,1:48:34.51:35,0,860	0/1:46,1:47:34.95:35,0,846	1/1:2,72:74:99:2442,162,0	1/1:1,68:66:99:2137,141,0	1/1:3,26:28:49.14:711,49,0	1/1:3,28:31:56.94:996,57,0	1/1:1,21:22:63:848,63,0	1/1:2,29:31:90.22:1342,90,0	1/1:0,113:113:99:4204,277,0	0/0:36,1:37:49.99:0,50,727	1/1:2,32:34:71.90:1071,72,0	1/1:2,41:41:99:1559,102,0	0/1:27,0:27:76.34:76,0,395	1/1:2,48:50:99:2121,147,0	1/1:1,38:38:98.82:1475,99,0	1/1:0,15:15:45.15:679,45,0
chr10	13412859	.	CG	C	3614.10	PASS	AB=1.000;AC=33;AF=0.589;AN=56;BaseQRankSum=21.991;DP=1183;FS=0.720;HRun=1;HaplotypeScore=258.1188;InbreedingCoeff=0.8028;MQ=65.58;MQ0=13;MQRankSum=-0.918;QD=4.85;ReadPosRankSum=6.681;VQSLOD=0.1286;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,104,862	1/1:18,0:18:31.70:101,32,0	0/0:56,0:43:99:0,115,1803	0/0:46,0:39:93.53:0,94,1501	1/1:25,0:23:44.40:138,44,0	0/0:26,0:26:56.96:0,57,456	0/0:30,0:30:66.40:0,66,587	0/1:44,0:44:31.69:113,0,32	1/1:49,0:49:86.59:270,87,0	1/1:43,0:43:48.78:216,49,0	1/1:20,0:20:35.52:111,36,0	0/0:78,0:78:99:0,218,1701	0/0:48,0:48:99:0,135,1045	0/0:47,0:47:99:0,129,1018	1/1:72,1:73:98.55:341,99,0	1/1:69,0:66:73.42:284,73,0	0/1:29,0:28:3.10:64,0,3	1/1:30,0:30:46.57:147,47,0	0/1:21,0:21:19.17:64,0,19	1/1:30,1:31:65.65:203,66,0	1/1:113,0:113:99:621,196,0	0/0:37,0:37:96.66:0,97,782	1/1:34,0:34:52.70:164,53,0	1/1:42,0:39:75.30:234,75,0	0/0:26,1:27:76.49:0,76,536	1/1:49,1:50:65.60:257,66,0	1/1:39,0:37:45.99:192,46,0	1/1:15,0:15:30.26:95,30,0
chr10	13413362	.	GTAC	G	2737.30	PASS	AB=0.526;AC=5;AF=0.089;AN=56;BaseQRankSum=6.086;DP=743;FS=2.273;HRun=0;HaplotypeScore=123.6910;InbreedingCoeff=0.7805;MQ=87.98;MQ0=0;MQRankSum=-1.609;QD=39.10;ReadPosRankSum=1.645;VQSLOD=4.9447;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:57:99:0,172,3832	0/0:14,0:14:42.14:0,42,945	0/0:24,0:24:68.71:0,69,1362	0/0:27,0:28:69.29:0,69,1456	0/0:33,0:33:96.33:0,96,2149	0/0:23,0:23:66.23:0,66,1495	0/0:18,0:18:54.19:0,54,1179	0/0:40,0:40:99:0,114,2581	0/0:21,0:21:60.21:0,60,1337	0/0:17,0:17:51.13:0,51,1108	0/0:14,0:14:39.13:0,39,883	0/0:27,0:27:78.27:0,78,1745	0/0:30,0:30:90.31:0,90,2026	0/0:22,0:22:60.21:0,60,1354	0/0:24,0:24:72.25:0,72,1612	0/0:36,0:36:99:0,105,2332	0/0:27,0:27:78.27:0,78,1767	0/0:26,0:26:78.27:0,78,1757	0/1:2,18:20:33.98:799,0,34	1/1:1,22:25:66.18:1069,66,0	1/1:1,24:25:60.21:999,60,0	0/0:28,0:28:84.29:0,84,1898	0/0:21,0:21:63.20:0,63,1355	0/0:26,0:26:75.73:0,76,1695	0/0:32,0:32:93.32:0,93,2107	0/0:28,0:28:75.26:0,75,1684	0/0:32,0:32:93.32:0,93,2105	0/0:25,0:25:66.23:0,66,1491
chr10	13415734	.	C	CT	1348.71	PASS	AB=0.799;AC=15;AF=0.268;AN=56;BaseQRankSum=16.654;DP=674;FS=236.635;HRun=0;HaplotypeScore=138.5655;InbreedingCoeff=-0.4179;MQ=71.68;MQ0=0;MQRankSum=-15.424;QD=3.66;ReadPosRankSum=2.755;VQSLOD=-0.6984;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,4:38:51.45:0,51,1217	0/1:10,1:11:19.99:20,0,277	0/0:14,0:13:4.54:0,5,373	0/1:19,2:20:28.90:29,0,439	0/0:17,5:22:25.11:0,25,615	0/1:18,5:23:22.28:22,0,510	0/1:26,10:36:58.42:58,0,904	0/1:20,3:23:20.44:20,0,533	0/1:14,6:20:97.84:98,0,524	0/0:17,1:18:25.15:0,25,596	0/0:4,3:7:8.96:0,9,102	0/1:27,10:37:99:159,0,830	0/1:15,5:20:92.37:92,0,445	0/1:22,11:33:99:206,0,761	0/1:33,8:41:99:119,0,1015	0/1:17,11:28:99:210,0,606	0/0:41,4:45:26.69:0,27,1396	0/0:40,4:45:1.95:0,2,1439	0/0:13,3:16:13:0,13,440	0/0:17,3:20:21.44:0,21,560	0/0:25,0:25:72.04:0,72,883	0/1:11,4:15:16.19:16,0,342	0/0:9,2:11:4.04:0,4,328	0/0:22,4:26:17.26:0,17,769	0/0:17,2:19:0.84:0,1,579	0/1:16,9:25:99:147,0,510	0/1:16,14:30:99:287,0,513	0/1:3,1:4:16.06:16,0,113
chr10	13415781	.	G	GC	3758.91	PASS	AB=0.837;AC=26;AF=0.464;AN=56;BaseQRankSum=17.498;DP=724;FS=210.290;HRun=1;HaplotypeScore=140.7934;InbreedingCoeff=-0.8150;MQ=72.69;MQ0=0;MQRankSum=-15.313;QD=5.52;ReadPosRankSum=-2.482;VQSLOD=-0.3080;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:24,9:33:99:179,0,829	0/1:10,1:11:17.72:18,0,281	0/1:25,4:28:99:142,0,636	0/1:27,7:33:99:228,0,803	0/1:9,3:12:72.55:73,0,255	0/1:17,10:27:99:337,0,581	0/1:27,13:39:99:442,0,693	0/1:30,4:34:99:99,0,980	0/1:18,9:27:99:254,0,574	0/1:17,2:19:35.53:36,0,569	0/1:5,2:7:4.94:5,0,141	0/1:26,10:36:99:337,0,784	0/1:18,5:23:99:113,0,596	0/1:28,6:34:99:210,0,803	0/1:34,8:42:99:216,0,1076	0/1:23,3:26:73.69:74,0,743	0/1:40,5:45:99:118,0,1262	0/1:28,4:32:99:131,0,916	0/1:23,4:28:99:145,0,650	0/1:12,4:16:91.82:92,0,386	0/0:33,2:35:87.28:0,87,1127	0/0:7,1:8:21.07:0,21,273	0/1:11,1:12:7.22:7,0,392	0/1:19,9:28:99:127,0,653	0/1:22,6:28:99:107,0,690	0/1:18,4:22:99:115,0,572	0/1:18,5:23:99:153,0,595	0/1:12,1:12:1.01:1,0,428
chr10	13415892	.	G	GT	18065.85	PASS	AB=0.686;AC=28;AF=0.500;AN=56;BaseQRankSum=17.755;DP=1111;FS=0.947;HRun=1;HaplotypeScore=157.2195;InbreedingCoeff=-1.0000;MQ=58.10;MQ0=0;MQRankSum=-17.865;QD=16.26;ReadPosRankSum=-0.647;VQSLOD=4.6989;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:39,26:65:99:930,0,1323	0/1:15,10:25:99:419,0,434	0/1:17,16:32:99:616,0,319	0/1:21,8:29:99:346,0,428	0/1:16,15:31:99:496,0,493	0/1:23,19:42:99:722,0,729	0/1:26,19:45:99:676,0,880	0/1:29,19:48:99:807,0,751	0/1:10,18:28:99:559,0,281	0/1:24,20:44:99:748,0,802	0/1:11,14:25:99:418,0,362	0/1:33,23:56:99:804,0,1048	0/1:15,17:32:99:666,0,488	0/1:27,25:52:99:969,0,844	0/1:42,15:57:99:439,0,1431	0/1:30,17:47:99:615,0,990	0/1:22,21:43:99:820,0,655	0/1:23,20:43:99:628,0,704	0/1:15,18:33:99:760,0,355	0/1:16,12:28:99:413,0,528	0/1:25,19:44:99:658,0,792	0/1:8,16:24:99:520,0,242	0/1:13,17:30:99:630,0,416	0/1:30,20:50:99:538,0,1017	0/1:24,18:42:99:685,0,773	0/1:24,21:45:99:768,0,766	0/1:21,23:44:99:858,0,689	0/1:11,14:25:99:560,0,264
chr10	13416954	.	CTAGCACTCCCCTTCCG	C	3676.45	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=10.108;DP=751;FS=12.269;HRun=0;HaplotypeScore=304.4744;InbreedingCoeff=0.9990;MQ=76.04;MQ0=0;MQRankSum=-5.784;QD=37.51;ReadPosRankSum=-0.954;VQSLOD=1.2279;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:96.33:0,96,6338	0/0:17,0:17:42.14:0,42,3125	0/0:19,0:19:51.18:0,51,2831	0/0:14,0:14:27.09:0,27,1213	0/0:22,0:22:60.19:0,60,4099	0/0:14,0:14:36.12:0,36,2519	0/0:36,0:36:99:0,99,6723	0/0:25,0:25:60.20:0,60,3579	0/0:28,0:28:81.26:0,81,5576	0/0:26,0:26:69.24:0,69,4830	0/0:14,0:14:30.10:0,30,2041	0/0:46,0:46:99:0,135,9752	0/0:23,0:23:66.23:0,66,4479	0/0:27,0:27:78.27:0,78,5050	0/0:46,0:46:99:0,129,8622	0/0:35,0:35:99:0,99,6107	0/0:30,0:30:81.28:0,81,5824	0/0:29,0:29:87.28:0,87,5528	1/1:9,13:22:38.98:825,39,0	1/1:1,19:20:45.11:1775,45,0	1/1:23,33:56:27.99:1076,28,0	0/0:21,0:21:57.20:0,57,4113	0/0:22,0:22:60.21:0,60,4412	0/0:28,0:28:75.73:0,76,5021	0/0:24,0:24:66.23:0,66,4306	0/0:28,0:28:81.28:0,81,5541	0/0:33,0:33:96.31:0,96,6459	0/0:14,0:14:39.13:0,39,2649
chr10	13419190	.	G	GCT	1437.13	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-8.696;DP=759;FS=23.675;HRun=0;HaplotypeScore=87.3283;InbreedingCoeff=0.9947;MQ=81.61;MQ0=0;MQRankSum=-3.627;QD=35.05;ReadPosRankSum=1.214;VQSLOD=3.2126;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,126,1676	0/0:7,0:7:18.03:0,18,222	0/0:21,0:21:51.09:0,51,619	0/0:18,0:18:42.14:0,42,549	0/0:19,0:19:51.17:0,51,679	1/1:1,16:17:42.14:727,42,0	1/1:4,20:24:48.04:831,48,0	0/0:47,0:47:99:0,102,1294	0/0:38,0:38:99:0,111,1477	0/0:18,0:18:51.13:0,51,679	0/0:15,0:15:45.15:0,45,599	0/0:38,0:38:99:0,105,1398	0/0:30,0:30:87.25:0,87,1124	0/0:22,0:22:63.19:0,63,823	0/0:25,0:25:66.20:0,66,864	0/0:32,0:32:93.31:0,93,1239	0/0:41,0:41:99:0,114,1516	0/0:29,0:29:81.24:0,81,1058	0/0:38,0:38:90.29:0,90,1185	0/0:23,0:23:60.18:0,60,773	0/0:68,0:68:99:0,187,2445	0/0:15,0:15:45.15:0,45,599	0/0:9,0:9:27.07:0,27,343	0/0:34,0:34:93.29:0,93,1222	0/0:21,0:21:57.19:0,57,759	0/0:27,0:27:81.27:0,81,1078	0/0:26,0:26:75.25:0,75,996	0/0:11,0:11:27.09:0,27,360
chr10	13422373	.	AG	A	18210.09	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=16.528;DP=671;FS=4.371;HRun=1;HaplotypeScore=161.4936;InbreedingCoeff=0.9989;MQ=65.98;MQ0=0;MQRankSum=-9.785;QD=36.94;ReadPosRankSum=2.402;VQSLOD=4.4107;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,33:38:99:1333,108,0	1/1:0,7:7:21.07:272,21,0	0/0:31,0:30:56.20:0,56,1228	0/0:25,0:24:64.90:0,65,949	1/1:1,26:28:81.26:1038,81,0	0/0:16,0:16:48.15:0,48,744	0/0:19,0:19:57.19:0,57,907	1/1:0,37:37:99:1353,108,0	1/1:2,21:23:66.20:841,66,0	1/1:2,15:17:51.14:645,51,0	1/1:4,26:30:87.21:1079,87,0	1/1:1,32:33:90.29:1165,90,0	1/1:0,18:18:54.13:680,54,0	1/1:1,15:16:48.11:602,48,0	1/1:1,32:33:93.29:1190,93,0	1/1:1,27:28:84.24:1071,84,0	1/1:1,16:17:48.04:583,48,0	1/1:0,10:10:30.10:389,30,0	0/0:23,0:23:69.21:0,69,1058	0/0:36,0:36:99:0,108,1726	0/0:28,0:28:84.27:0,84,1318	1/1:2,24:26:75.14:933,75,0	1/1:3,24:27:81.22:1021,81,0	1/1:0,10:10:27.09:350,27,0	1/1:0,26:26:78.25:1012,78,0	1/1:1,26:27:81.26:1040,81,0	1/1:2,30:32:96.27:1225,96,0	1/1:0,10:10:30.10:389,30,0
chr10	13422396	.	GT	G	1698.86	PASS	AB=0.936;AC=44;AF=0.786;AN=56;BaseQRankSum=3.795;DP=628;FS=10.172;HRun=13;HaplotypeScore=206.1743;InbreedingCoeff=0.2905;MQ=62.49;MQ0=0;MQRankSum=-6.848;QD=2.96;ReadPosRankSum=5.446;VQSLOD=-0.1418;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:43,0:43:12.23:62,12,0	1/1:8,0:8:2.30:7,2,0	0/0:18,0:18:24.41:0,24,170	0/1:16,0:15:18.69:19,0,136	1/1:29,0:29:22.53:61,23,0	0/0:18,0:19:23.24:0,23,319	0/0:16,0:17:3.33:0,3,240	0/1:32,0:32:23.23:33,0,23	1/1:22,0:22:27.82:109,28,0	1/1:21,0:21:15.92:40,16,0	1/1:30,0:30:15.15:51,15,0	1/1:23,0:23:9.72:22,10,0	1/1:18,0:18:15.90:60,16,0	1/1:19,0:19:12.04:33,12,0	1/1:28,0:28:15.75:52,16,0	1/1:31,0:31:20.70:51,21,0	1/1:13,0:13:8.58:32,9,0	1/1:14,0:14:2.96:7,3,0	0/1:8,12:21:11.47:243,0,11	1/1:7,26:33:38.32:446,38,0	1/1:8,13:21:25.87:250,26,0	1/1:24,0:24:17.46:44,17,0	0/1:26,0:26:0.28:27,0,0	1/1:11,0:11:3.33:9,3,0	1/1:25,0:25:30.18:94,30,0	0/1:30,0:30:6.76:29,0,7	1/1:26,0:26:2.33:56,2,0	0/1:10,0:10:6.51:18,0,7
chr10	13422407	.	TTTC	T	4165.63	PASS	AB=0.989;AC=40;AF=0.714;AN=56;BaseQRankSum=7.314;DP=628;FS=11.527;HRun=0;HaplotypeScore=205.8759;InbreedingCoeff=0.4478;MQ=62.15;MQ0=0;MQRankSum=-8.337;QD=8.04;ReadPosRankSum=5.773;VQSLOD=1.2098;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:39,1:40:1.20:159,1,0	1/1:6,0:6:14.29:50,14,0	0/0:18,0:18:39.42:0,39,519	0/0:14,0:13:36.01:0,36,486	1/1:23,3:26:37.40:273,37,0	0/1:22,0:22:65.54:66,0,334	0/1:18,0:18:3.72:4,0,301	0/1:29,1:30:97.23:301,0,97	1/1:22,1:23:11.53:196,12,0	1/1:25,1:26:26.37:368,26,0	1/1:28,2:30:30.37:238,30,0	1/1:21,0:21:11.77:131,12,0	1/1:17,1:18:17.44:138,17,0	1/1:21,0:21:34.10:122,34,0	1/1:26,2:28:29.03:294,29,0	1/1:27,2:29:29.19:261,29,0	1/1:13,1:14:20.04:168,20,0	1/1:12,0:12:6.66:80,7,0	0/0:22,0:22:62.80:0,63,692	0/0:34,0:34:97.68:0,98,1005	0/0:22,0:22:60.08:0,60,601	1/1:23,1:24:31.78:224,32,0	0/1:24,0:24:68.18:136,0,68	1/1:9,1:10:9.04:34,9,0	1/1:23,4:27:11.83:297,12,0	1/1:29,2:31:46.30:453,46,0	0/1:27,1:28:22.19:131,0,22	0/1:10,0:10:9.48:41,0,9
chr10	13422408	.	TTC	T	13330.62	PASS	AB=1.000;AC=44;AF=0.786;AN=56;BaseQRankSum=4.459;DP=598;FS=4.068;HRun=0;HaplotypeScore=156.7092;InbreedingCoeff=0.7771;MQ=63.48;MQ0=0;MQRankSum=-9.089;QD=26.88;ReadPosRankSum=2.981;VQSLOD=6.0646;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,34:38:76.34:891,76,0	1/1:1,5:6:18.06:232,18,0	0/0:16,0:19:33.51:0,34,436	0/0:12,0:12:22.61:0,23,282	1/1:5,21:26:69.01:827,69,0	0/1:22,0:22:94.07:94,0,118	0/1:17,0:17:38.36:38,0,101	1/1:16,10:26:20:635,20,0	1/1:8,14:22:64.32:692,64,0	1/1:11,14:25:72.07:810,72,0	1/1:6,23:29:70.93:841,71,0	1/1:6,11:17:45.02:542,45,0	1/1:8,8:16:47.15:507,47,0	1/1:2,19:21:42.13:548,42,0	1/1:14,12:26:75.03:833,75,0	1/1:4,25:29:75.15:955,75,0	1/1:7,7:14:38.83:383,39,0	1/1:1,10:11:26.89:313,27,0	0/0:20,0:20:54.90:0,55,450	0/0:30,0:30:65.42:0,65,548	0/0:21,0:21:56.08:0,56,387	1/1:2,22:24:65.57:806,66,0	1/1:9,14:23:53.93:587,54,0	1/1:1,9:10:10.87:155,11,0	1/1:12,14:26:73.62:829,74,0	1/1:4,27:31:67.05:887,67,0	1/1:6,21:27:34.66:642,35,0	1/1:2,8:10:22.30:282,22,0
chr10	13422409	.	TC	T	7941.35	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=8.165;DP=582;FS=1.450;HRun=2;HaplotypeScore=161.0994;InbreedingCoeff=0.9832;MQ=64.53;MQ0=0;MQRankSum=-7.885;QD=16.58;ReadPosRankSum=1.898;VQSLOD=5.0318;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:36,2:38:73.59:482,74,0	1/1:6,0:6:17.48:101,17,0	0/0:20,0:20:43.49:0,43,395	0/0:12,0:12:23.47:0,23,156	1/1:24,0:24:67.42:400,67,0	1/1:21,2:23:17.99:251,18,0	1/1:14,3:17:14.92:196,15,0	1/1:22,4:26:68.36:552,68,0	1/1:18,3:21:61.90:447,62,0	1/1:25,0:25:73.94:518,74,0	1/1:25,1:27:69.38:422,69,0	1/1:15,0:15:44.21:284,44,0	1/1:13,2:15:44.22:294,44,0	1/1:21,0:21:40.99:242,41,0	1/1:24,0:24:70.95:482,71,0	1/1:27,0:28:73.38:440,73,0	1/1:13,0:13:35.41:229,35,0	1/1:10,0:10:26.45:160,26,0	0/0:20,0:20:41.77:0,42,265	0/0:31,0:31:41.21:0,41,247	0/0:20,0:20:35.18:0,35,197	1/1:23,0:23:64.48:385,64,0	1/1:19,1:20:53:345,53,0	1/1:10,0:10:11.71:69,12,0	1/1:23,1:25:73.31:469,73,0	1/1:30,1:31:89.04:645,89,0	1/1:25,2:27:55.82:369,56,0	1/1:9,1:10:23.55:160,24,0
chr10	13423769	.	T	TAAA	4879.06	PASS	AB=1.000;AC=39;AF=0.696;AN=56;BaseQRankSum=7.645;DP=513;FS=9.471;HRun=5;HaplotypeScore=125.1661;InbreedingCoeff=0.5506;MQ=65.44;MQ0=3;MQRankSum=-6.080;QD=11.96;ReadPosRankSum=-2.674;VQSLOD=0.4765;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:25:2.82:248,0,3	1/1:3,5:9:6.02:88,6,0	0/0:19,0:10:22.36:0,22,258	0/1:21,0:9:15.59:16,0,50	1/1:17,0:17:21.46:253,21,0	0/0:13,0:13:33.11:0,33,476	0/0:24,0:24:63.12:0,63,787	1/1:23,0:23:24:297,24,0	1/1:20,0:19:34.42:437,34,0	1/1:7,6:16:19.73:234,20,0	1/1:15,1:16:18.41:168,18,0	1/1:29,0:29:29.52:419,30,0	1/1:28,0:28:1.09:197,1,0	0/1:18,0:18:16.01:40,0,16	1/1:11,9:20:18.02:238,18,0	1/1:19,0:17:33.20:377,33,0	1/1:18,0:18:12.45:124,12,0	1/1:17,0:17:27.79:302,28,0	0/0:17,0:17:44.90:0,45,550	0/0:21,0:21:46.99:0,47,617	0/0:11,0:11:15.05:0,15,219	0/1:15,0:15:5.01:85,0,5	1/1:13,0:13:19.25:184,19,0	1/1:10,0:11:12:134,12,0	0/1:16,0:16:9.95:98,0,10	1/1:25,0:25:55.49:605,55,0	1/1:24,0:23:17.64:281,18,0	1/1:6,1:7:5.01:56,5,0
chr10	13423775	.	C	CAACAA	4464.01	PASS	AB=0.952;AC=26;AF=0.464;AN=56;BaseQRankSum=5.598;DP=541;FS=39.738;HRun=0;HaplotypeScore=146.9967;InbreedingCoeff=0.0047;MQ=63.87;MQ0=3;MQRankSum=-3.814;QD=10.97;ReadPosRankSum=-0.342;VQSLOD=2.7326;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,13:33:19.18:628,19,0	0/1:10,0:10:3.50:64,0,3	0/0:19,0:10:26.78:0,27,290	0/0:18,0:8:2.73:0,3,60	0/1:20,0:20:52.77:53,0,93	0/0:5,0:15:33.03:0,33,477	0/0:9,0:22:51.14:0,51,740	0/1:16,0:29:99:161,0,217	0/1:17,0:16:92.63:134,0,93	0/1:15,0:15:44.76:45,0,59	0/1:18,0:18:56.37:56,0,153	1/1:24,6:31:86.27:1261,86,0	1/1:8,20:30:26.89:611,27,0	0/1:7,0:16:4.41:194,0,4	1/1:21,0:20:12.45:108,12,0	0/1:20,0:18:99:130,0,103	0/1:17,0:17:36.66:37,0,155	0/1:16,0:16:53.87:72,0,54	0/0:5,0:17:23.77:0,24,556	0/0:11,0:22:30.75:0,31,502	0/0:3,0:11:17.91:0,18,244	1/1:2,11:18:20.89:331,21,0	0/1:14,0:14:27.35:27,0,84	0/1:10,0:10:25.35:25,0,41	1/1:4,13:21:15:315,15,0	0/1:27,0:27:95.03:149,0,95	0/1:24,0:23:62.13:62,0,198	0/0:7,0:7:18.79:0,19,139
chr10	13425239	.	T	TA	8806.37	PASS	AB=1.000;AC=32;AF=0.571;AN=56;BaseQRankSum=-0.231;DP=670;FS=7.332;HRun=9;HaplotypeScore=109.6268;InbreedingCoeff=0.8700;MQ=56.89;MQ0=2;MQRankSum=-9.905;QD=21.96;ReadPosRankSum=-1.104;VQSLOD=4.0337;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,108,933	1/1:1,7:8:20.99:217,21,0	0/1:24,0:10:12.30:12,0,150	0/1:20,0:10:3.81:4,0,55	1/1:8,16:24:27.96:496,28,0	0/0:24,0:24:56.97:0,57,491	0/0:25,0:25:53.97:0,54,464	1/1:15,19:34:52.09:780,52,0	1/1:4,13:17:39.11:430,39,0	1/1:12,17:29:69.17:749,69,0	1/1:6,12:19:47.87:479,48,0	0/0:30,1:31:35.79:0,36,528	0/0:23,0:23:50.98:0,51,442	0/0:21,0:21:56.99:0,57,495	1/1:3,31:34:64.19:933,64,0	1/1:9,22:31:69.19:763,69,0	1/1:10,28:38:77.22:1004,77,0	1/1:1,9:11:32.90:334,33,0	0/0:27,0:27:62.95:0,63,542	0/0:16,0:16:44.99:0,45,391	0/0:14,0:14:29.97:0,30,260	0/0:25,0:25:41.98:0,42,520	1/1:4,16:20:48.13:530,48,0	1/1:5,13:18:30.07:323,30,0	0/0:20,1:21:17.85:0,18,384	1/1:11,23:34:61.10:867,61,0	1/1:14,19:32:75.08:793,75,0	1/1:5,1:6:9.01:90,9,0
chr10	13425258	.	GA	G	12884.12	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-4.723;DP=642;FS=20.140;HRun=8;HaplotypeScore=98.5253;InbreedingCoeff=0.9745;MQ=66.92;MQ0=4;MQRankSum=-3.551;QD=22.52;ReadPosRankSum=4.691;VQSLOD=3.5927;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,40:42:99:984,102,0	1/1:1,8:9:24.04:232,24,0	0/0:38,0:19:25.58:0,26,277	0/0:32,0:15:18.02:0,18,200	1/1:6,18:24:48.06:461,48,0	1/1:1,22:23:54.09:521,54,0	1/1:1,20:21:45.07:435,45,0	1/1:13,21:34:20.70:552,21,0	1/1:4,12:16:38.99:360,39,0	1/1:5,18:23:54.08:521,54,0	1/1:4,13:17:39.06:374,39,0	1/1:2,23:25:60.10:579,60,0	1/1:3,10:13:24.03:232,24,0	1/1:4,19:23:45.07:435,45,0	1/1:9,15:24:63.03:582,63,0	1/1:3,23:26:69.05:652,69,0	1/1:8,22:30:63.03:593,63,0	1/1:4,12:16:33.05:318,33,0	1/1:4,30:34:90.08:853,90,0	1/1:1,14:15:40.30:378,40,0	1/1:0,14:14:36.06:348,36,0	1/1:1,23:24:66.10:637,66,0	1/1:5,16:21:51.06:485,51,0	1/1:2,14:16:29.73:289,30,0	1/1:1,14:15:39.06:377,39,0	1/1:2,31:33:99:941,99,0	1/1:6,24:29:66.07:630,66,0	1/1:0,4:4:12.02:116,12,0
chr10	13427763	.	C	CCA	28899.55	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-9.328;DP=730;FS=9.833;HRun=0;HaplotypeScore=73.4562;InbreedingCoeff=0.9970;MQ=85.82;MQ0=3;MQRankSum=-10.533;QD=42.25;ReadPosRankSum=7.349;VQSLOD=6.1655;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,37:39:87.30:1542,87,0	1/1:2,9:12:24.08:426,24,0	0/0:21,0:21:60.17:0,60,779	0/0:25,0:25:45.99:0,46,759	1/1:2,14:17:39.13:689,39,0	1/1:3,17:21:45.15:795,45,0	1/1:0,23:24:63.22:1118,63,0	1/1:10,25:36:81.26:1377,81,0	1/1:4,30:34:84.29:1489,84,0	1/1:3,18:22:54.16:914,54,0	1/1:0,12:12:30.10:532,30,0	1/1:3,43:47:99:2127,120,0	1/1:0,24:26:63.22:1113,63,0	1/1:3,36:37:93.32:1648,93,0	1/1:3,37:40:99:1756,99,0	1/1:3,34:37:81.28:1422,81,0	1/1:3,35:37:87.30:1528,87,0	1/1:1,20:22:54.18:958,54,0	1/1:1,14:17:48.14:795,48,0	1/1:1,8:9:24.08:424,24,0	1/1:6,33:40:93.31:1621,93,0	1/1:2,14:16:36.12:638,36,0	1/1:2,11:13:30.10:532,30,0	1/1:4,29:33:84.29:1486,84,0	1/1:2,19:21:48.16:851,48,0	1/1:1,23:25:69.21:1183,69,0	1/1:5,28:34:81.09:1401,81,0	1/1:0,10:10:30.10:532,30,0
chr10	13428834	.	GTC	G	210.99	PASS	AB=1.000;AC=20;AF=0.385;AN=52;BaseQRankSum=-1.811;DP=271;FS=1.684;HRun=0;HaplotypeScore=47.2305;InbreedingCoeff=0.2963;MQ=27.70;MQ0=44;MQRankSum=-0.331;QD=1.95;ReadPosRankSum=0.409;VQSLOD=1.3494;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:15,1:14:5.63:46,6,0	0/0:5,0:5:8.94:0,9,68	0/0:31,0:1:2.99:0,3,23	0/0:39,0:7:17.72:0,18,124	0/0:6,0:6:2.92:0,3,17	1/1:5,1:6:2.96:19,3,0	1/1:12,0:10:14.30:81,14,0	1/1:11,0:9:2.39:69,2,0	0/0:9,0:8:5.33:0,5,54	1/1:4,0:4:5.99:25,6,0	0/0:2,0:1:0:0,0,0	1/1:5,0:4:2.94:18,3,0	0/1:5,0:3:2.08:27,0,2	./.	0/0:13,0:12:8.81:0,9,53	0/0:12,0:12:17.60:0,18,105	0/1:15,0:11:18.65:33,0,19	0/0:5,0:1:0:0,0,0	0/0:4,0:2:5.93:0,6,40	0/1:6,0:4:11.59:12,0,37	0/1:12,0:7:17.72:18,0,19	./.	0/0:4,6:10:1.94:0,2,16	0/0:16,0:15:8.67:0,9,52	0/1:3,0:3:0:0,0,0	0/1:11,0:8:0.01:0,0,22	0/0:4,0:3:5.59:0,6,34	1/1:2,0:1:1.82:5,2,0
chr10	13428846	.	GTC	G	1254.55	PASS	AB=0.834;AC=25;AF=0.481;AN=52;BaseQRankSum=2.035;DP=282;FS=1.396;HRun=0;HaplotypeScore=46.2214;InbreedingCoeff=0.2881;MQ=28.34;MQ0=42;MQRankSum=0.828;QD=9.16;ReadPosRankSum=0.932;VQSLOD=2.9241;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:13:3.32:0,3,53	1/1:0,5:5:9.03:127,9,0	0/0:36,0:1:3.01:0,3,58	0/0:48,0:7:21.07:0,21,371	1/1:1,4:5:3.01:42,3,0	0/0:6,0:6:9.03:0,9,135	0/1:11,1:10:3.41:3,0,190	0/0:6,0:5:12.04:0,12,187	0/1:2,6:7:12.14:65,0,12	1/1:4,1:5:7.98:69,8,0	0/0:2,0:1:2.97:0,3,20	0/0:8,0:7:2.60:0,3,33	0/0:6,0:4:11.72:0,12,107	./.	0/1:2,11:12:23.42:102,0,23	1/1:1,12:13:0.59:263,1,0	1/1:11,8:16:31.92:355,32,0	0/0:5,0:1:0:0,0,0	0/0:7,0:5:14.81:0,15,128	0/1:5,0:4:31.61:32,0,86	0/1:11,0:6:40.69:41,0,49	./.	0/1:6,2:8:2.09:28,0,2	1/1:0,18:17:8.92:113,9,0	0/1:4,0:4:0:0,0,0	1/1:5,0:4:8.89:59,9,0	1/1:1,2:3:8.97:93,9,0	1/1:2,0:1:2.94:18,3,0
chr10	13428852	.	GTT	G	1315	PASS	AB=0.987;AC=29;AF=0.537;AN=54;BaseQRankSum=1.519;DP=286;FS=1.390;HRun=3;HaplotypeScore=47.2753;InbreedingCoeff=0.3393;MQ=28.73;MQ0=41;MQRankSum=0.382;QD=9.13;ReadPosRankSum=2.052;VQSLOD=0.6545;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:13,1:13:26.89:27,0,56	1/1:5,0:5:9.03:128,9,0	0/0:36,0:1:2.97:0,3,20	0/0:48,0:7:20.80:0,21,150	1/1:5,0:5:3.01:42,3,0	0/0:6,0:6:8.95:0,9,85	0/0:12,0:10:8.60:0,9,124	0/0:7,0:5:11.90:0,12,84	0/1:9,0:8:11.47:66,0,11	1/1:5,0:5:8.84:79,9,0	0/0:2,0:1:2.92:0,3,17	0/0:6,3:7:1.68:0,2,34	0/0:6,0:4:6.59:0,7,46	1/1:2,0:1:0.89:2,1,0	0/1:13,0:12:8.32:100,0,8	1/1:11,3:14:15.09:304,15,0	1/1:20,0:16:15.16:331,15,0	0/0:5,0:1:0:0,0,0	0/0:8,0:7:20.40:0,20,127	0/1:4,0:4:30.52:31,0,39	0/1:11,0:7:22.40:31,0,22	./.	1/1:5,1:6:5.90:37,6,0	1/1:19,1:19:8.82:113,9,0	1/1:5,0:4:2.84:18,3,0	1/1:5,0:4:8.89:59,9,0	1/1:4,0:4:9.01:98,9,0	1/1:2,0:1:2.96:19,3,0
chr10	13428854	.	T	TTG	382.74	PASS	AB=0.990;AC=26;AF=0.565;AN=46;BaseQRankSum=-2.727;DP=288;FS=0.000;HRun=0;HaplotypeScore=53.6639;InbreedingCoeff=0.2281;MQ=35.80;MQ0=42;MQRankSum=-2.311;QD=2.84;ReadPosRankSum=-2.051;VQSLOD=1.3316;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:14,1:14:15.30:70,0,15	0/0:5,0:5:8.04:0,8,33	0/0:36,0:3:2.74:0,3,12	./.	0/0:4,0:4:2.68:0,3,11	1/1:4,2:6:3:27,3,0	1/1:11,1:10:1.92:44,2,0	./.	0/0:9,0:8:1.31:0,1,16	0/0:4,0:4:2.56:0,3,9	./.	1/1:8,0:7:6.88:39,7,0	1/1:5,1:4:6.02:82,6,0	1/1:3,0:2:0.89:2,1,0	0/0:13,0:12:8.14:0,8,39	0/1:14,0:14:12.17:80,0,12	0/0:20,0:16:11.24:0,11,47	0/1:5,0:1:0:0,0,0	1/1:8,0:7:8.72:50,9,0	1/1:3,0:4:2.97:20,3,0	0/1:13,0:8:2.73:13,0,3	./.	1/1:6,0:6:2.94:18,3,0	0/1:21,0:20:9.39:9,0,14	1/1:3,2:4:3.01:37,3,0	1/1:6,0:5:5.89:23,6,0	0/1:3,0:3:2.89:3,0,6	./.
chr10	13429557	.	T	TTA	5434.09	PASS	AB=0.562;AC=36;AF=0.692;AN=52;BaseQRankSum=-9.207;DP=261;FS=0.702;HRun=0;HaplotypeScore=41.5475;InbreedingCoeff=0.3279;MQ=71.24;MQ0=2;MQRankSum=-0.719;QD=27.58;ReadPosRankSum=2.290;VQSLOD=5.4625;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:4,10:14:13.10:320,0,13	1/1:1,2:3:3.01:49,3,0	0/0:9,0:5:2.29:0,2,7	0/0:19,0:10:8.82:0,9,32	0/1:2,11:13:56.04:179,0,56	1/1:1,6:7:9.03:148,9,0	./.	1/1:10,31:41:69.06:1374,69,0	./.	1/1:0,9:9:24.08:393,24,0	0/1:1,6:7:15.70:89,0,16	1/1:2,4:6:12.04:197,12,0	1/1:5,3:8:6.02:98,6,0	1/1:1,2:3:6.02:89,6,0	1/1:1,1:2:3.01:49,3,0	0/0:1,0:1:3.01:0,3,37	1/1:5,26:32:0.89:1056,1,0	0/1:3,10:13:21.26:363,0,21	0/0:6,0:20:48.09:0,48,239	0/0:1,0:6:14.20:0,14,70	0/0:3,0:7:5.68:0,6,28	1/1:0,1:1:3.01:48,3,0	1/1:1,2:4:6.02:98,6,0	1/1:0,1:1:3.01:49,3,0	1/1:2,8:10:18.06:294,18,0	1/1:4,2:6:6.02:98,6,0	1/1:3,6:9:15.05:246,15,0	1/1:3,4:7:12.04:197,12,0
chr10	13429658	.	C	CAT	1143.78	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-3.756;DP=436;FS=1.931;HRun=0;HaplotypeScore=101.7681;InbreedingCoeff=0.9044;MQ=65.02;MQ0=1;MQRankSum=1.983;QD=30.91;ReadPosRankSum=1.727;VQSLOD=5.5719;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:69.22:0,69,887	0/0:5,0:5:12.04:0,12,154	0/0:8,0:7:8.05:0,8,69	0/0:9,0:8:11.62:0,12,119	0/0:28,0:28:69.21:0,69,874	0/0:20,0:20:54.18:0,54,694	0/0:13,0:13:36.12:0,36,463	0/0:40,0:40:99:0,99,1212	0/0:8,0:8:24.08:0,24,309	0/0:16,0:16:45.15:0,45,575	0/0:19,0:19:48.16:0,48,617	0/0:12,0:12:27.09:0,27,347	0/0:10,0:10:18.05:0,18,218	0/0:4,0:4:12.04:0,12,154	0/0:13,0:13:30.09:0,30,376	0/0:17,0:17:45.10:0,45,559	0/0:32,0:32:93.30:0,93,1196	0/0:16,0:16:42.14:0,42,538	1/1:3,9:12:27.09:437,27,0	1/1:3,15:18:38.98:643,39,0	1/1:1,6:7:12.04:202,12,0	0/0:6,0:6:15.05:0,15,192	0/0:12,0:12:33.11:0,33,424	0/0:6,0:6:9.03:0,9,116	0/0:15,0:15:42.14:0,42,540	0/0:19,0:19:48.15:0,48,614	0/0:17,0:17:36.12:0,36,462	0/0:25,0:25:69.21:0,69,873
chr10	13432178	.	C	CG	1069.59	PASS	AB=0.805;AC=18;AF=0.321;AN=56;BaseQRankSum=-7.336;DP=509;FS=12.750;HRun=10;HaplotypeScore=97.6960;InbreedingCoeff=0.4353;MQ=79.09;MQ0=0;MQRankSum=-0.421;QD=4.95;ReadPosRankSum=-3.787;VQSLOD=-0.3200;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:14,16:30:21.05:224,21,0	0/0:9,0:9:14.90:0,15,118	0/0:13,0:14:17.34:0,17,126	0/1:18,0:17:19.38:19,0,102	0/0:17,0:17:35.92:0,36,292	1/1:5,2:7:12.03:127,12,0	0/1:18,10:28:49.78:136,0,50	0/0:20,0:20:35.73:0,36,291	0/0:26,0:26:65.35:0,65,540	0/0:22,0:22:56.86:0,57,466	0/0:7,0:7:14.95:0,15,123	1/1:7,14:22:2.17:59,2,0	0/1:4,10:14:15.34:55,0,15	0/1:17,6:23:13.62:44,0,14	0/0:18,0:18:47.92:0,48,394	0/0:20,0:20:50.88:0,51,418	0/0:32,0:32:77.81:0,78,639	0/0:37,0:37:95.85:0,96,788	1/1:7,5:12:18.05:192,18,0	0/1:3,2:5:13.25:13,0,19	1/1:20,22:42:32.92:326,33,0	0/1:9,0:9:18.49:26,0,18	0/0:7,0:7:17.96:0,18,147	0/0:21,0:21:59.89:0,60,492	1/1:4,1:5:3.01:32,3,0	0/0:21,0:21:56.93:0,57,467	0/0:7,0:7:14.94:0,15,123	0/0:15,0:15:35.92:0,36,295
chr10	13432547	.	A	AC	1233.91	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=-5.386;DP=627;FS=0.000;HRun=8;HaplotypeScore=71.5248;InbreedingCoeff=0.7820;MQ=82.28;MQ0=0;MQRankSum=0.055;QD=11.22;ReadPosRankSum=-2.609;VQSLOD=2.1011;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:65,0:65:99:0,147,1332	0/0:8,0:8:18:0,18,165	0/0:27,0:27:62.99:0,63,568	0/1:16,0:16:7.59:8,0,167	0/0:14,0:14:30:0,30,273	1/1:2,10:12:2.62:284,3,0	1/1:9,32:41:59.79:942,60,0	0/0:25,0:25:60.01:0,60,549	0/0:23,0:23:57.02:0,57,522	0/0:15,0:15:33.01:0,33,302	0/0:6,0:6:9:0,9,82	0/0:30,0:30:81.03:0,81,736	0/0:26,0:26:57.01:0,57,521	0/0:30,0:30:74.97:0,75,669	0/0:30,0:30:87.05:0,87,796	0/0:21,0:21:60.02:0,60,544	0/0:35,0:35:93.05:0,93,851	0/0:23,0:23:57.01:0,57,522	1/1:9,0:13:11.55:66,12,0	1/1:8,1:9:2.99:24,3,0	1/1:9,1:19:11.58:66,12,0	0/0:19,0:19:42:0,42,383	0/0:8,0:8:18:0,18,164	0/0:36,0:36:96.03:0,96,874	0/0:17,0:17:39.01:0,39,357	0/0:29,0:29:75.02:0,75,685	0/0:16,0:16:42:0,42,378	0/0:14,0:14:29.98:0,30,269
chr10	13435583	.	CCTT	C	7630.13	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=13.782;DP=751;FS=1.887;HRun=0;HaplotypeScore=112.1945;InbreedingCoeff=0.9998;MQ=76.60;MQ0=0;MQRankSum=-6.812;QD=44.62;ReadPosRankSum=3.981;VQSLOD=6.2321;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,33:34:93.32:1539,93,0	0/0:10,0:10:30.10:0,30,678	0/0:22,0:22:60.19:0,60,1216	0/0:21,0:21:57.17:0,57,1067	0/0:17,0:17:48.15:0,48,1035	0/0:28,0:28:78.25:0,78,1703	0/0:28,0:28:78.25:0,78,1676	0/0:26,0:26:69.24:0,69,1556	0/0:29,0:29:84.27:0,84,1851	0/0:30,0:30:87.30:0,87,1923	0/0:19,0:19:57.20:0,57,1271	1/1:0,39:39:99:1797,108,0	1/1:0,22:22:57.19:948,57,0	1/1:0,39:39:99:1747,105,0	0/0:36,0:35:96.33:0,96,2119	0/0:41,0:41:99:0,120,2670	0/0:30,0:30:90.28:0,90,1994	0/0:30,0:30:84.29:0,84,1875	0/0:22,0:22:66.23:0,66,1467	0/0:27,0:27:81.28:0,81,1767	0/0:34,0:34:96.33:0,96,2148	1/1:1,19:20:51.17:849,51,0	0/0:11,0:11:33.11:0,33,709	0/0:30,0:30:90.27:0,90,1981	1/1:1,16:17:45.15:750,45,0	0/0:42,0:42:99:0,117,2570	0/0:27,0:27:69.24:0,69,1522	0/0:20,0:20:54.19:0,54,1170
chr10	13435717	.	GCACA	G	5841.62	PASS	AB=0.860;AC=32;AF=0.615;AN=52;BaseQRankSum=0.265;DP=752;FS=34.113;HRun=0;HaplotypeScore=161.8921;InbreedingCoeff=0.5138;MQ=70.30;MQ0=15;MQRankSum=-1.227;QD=13.37;ReadPosRankSum=0.579;VQSLOD=2.8767;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:32:44.22:0,44,722	1/1:3,3:7:8.83:111,9,0	./.	./.	1/1:12,3:17:12.03:187,12,0	0/1:24,1:26:36.35:36,0,652	0/0:36,0:37:38.87:0,39,734	0/1:19,4:23:0.14:142,0,0	1/1:20,9:29:39.04:546,39,0	1/1:15,9:24:41.93:608,42,0	1/1:5,2:7:3.01:47,3,0	0/0:46,0:45:81.21:0,81,1634	0/0:17,0:18:26.11:0,26,414	0/0:28,0:31:42.37:0,42,867	1/1:23,14:38:56.01:786,56,0	1/1:22,9:32:26.20:487,26,0	1/1:16,9:27:32.67:618,33,0	1/1:18,6:24:26.01:443,26,0	0/1:13,1:14:3.49:69,0,3	0/0:5,0:10:16.85:0,17,85	0/1:32,1:38:26.43:26,0,136	0/0:26,0:28:20.85:0,21,356	1/1:5,3:9:5.99:83,6,0	1/1:28,12:41:39.98:586,40,0	0/1:17,3:20:99:121,0,144	0/1:16,6:23:43.27:299,0,43	1/1:20,9:29:28.62:451,29,0	1/1:3,3:8:15.04:196,15,0
chr10	13435798	.	GCA	G	12854.45	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=15.995;DP=902;FS=0.846;HRun=0;HaplotypeScore=156.7152;InbreedingCoeff=0.9996;MQ=57.49;MQ0=1;MQRankSum=2.818;QD=29.55;ReadPosRankSum=1.338;VQSLOD=5.7882;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,105,1740	1/1:2,8:10:24.08:311,24,0	0/0:35,0:25:51.12:0,51,729	0/0:36,0:26:48.11:0,48,760	1/1:3,11:14:30.10:390,30,0	0/0:26,0:25:72.21:0,72,1162	0/0:34,0:34:87.28:0,87,1439	1/1:6,33:39:99:1245,99,0	1/1:1,33:34:87.28:1125,87,0	1/1:6,35:41:99:1254,102,0	1/1:2,16:18:36.12:468,36,0	0/0:45,0:44:99:0,120,1979	0/0:38,0:38:99:0,108,1759	0/0:32,0:32:84.28:0,84,1417	1/1:6,30:36:90.21:1169,90,0	1/1:6,32:37:81.26:1053,81,0	1/1:5,20:25:60.14:741,60,0	1/1:1,26:27:66.20:844,66,0	0/0:25,0:25:69.24:0,69,1166	0/0:18,0:18:54.18:0,54,890	0/0:101,0:101:99:0,250,4314	0/0:17,0:17:48.16:0,48,793	1/1:2,14:16:36.01:468,36,0	1/1:7,42:49:59.39:1013,59,0	0/0:19,0:19:45.01:0,45,866	1/1:7,40:47:99:1566,123,0	1/1:3,16:19:39.13:506,39,0	1/1:3,19:22:54.17:702,54,0
chr10	13437868	.	GA	G	15750.40	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-6.860;DP=676;FS=9.304;HRun=8;HaplotypeScore=72.7388;InbreedingCoeff=0.9983;MQ=74.64;MQ0=0;MQRankSum=-5.730;QD=24.34;ReadPosRankSum=5.091;VQSLOD=5.1690;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,31:33:90.14:869,90,0	1/1:0,14:14:39.06:377,39,0	0/0:13,0:14:29.73:0,30,305	0/0:15,0:15:27.93:0,28,313	1/1:1,29:30:78.12:752,78,0	1/1:1,23:24:66.11:637,66,0	1/1:1,24:25:60.09:579,60,0	1/1:3,41:44:99:1072,111,0	1/1:3,20:23:51.08:492,51,0	1/1:4,23:27:69.10:661,69,0	1/1:1,17:18:51.08:492,51,0	1/1:4,17:21:25.42:438,25,0	1/1:2,26:28:78.12:752,78,0	1/1:3,16:19:48.07:463,48,0	1/1:5,26:31:72.10:695,72,0	1/1:4,20:24:51.08:492,51,0	1/1:4,23:27:60.09:579,60,0	1/1:0,30:30:90.14:869,90,0	1/1:4,16:20:48.08:464,48,0	1/1:0,18:18:51.08:493,51,0	1/1:2,16:18:45.07:435,45,0	1/1:2,18:20:51.07:493,51,0	1/1:4,21:25:66.10:633,66,0	1/1:2,26:28:69.11:666,69,0	1/1:2,25:27:75.12:724,75,0	1/1:6,26:32:69.08:666,69,0	1/1:6,22:28:66.10:637,66,0	1/1:1,12:13:33.05:319,33,0
chr10	13438065	.	AATACTAGGCC	A	15435.09	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=17.215;DP=644;FS=5.040;HRun=0;HaplotypeScore=201.9990;InbreedingCoeff=0.9718;MQ=81.71;MQ0=0;MQRankSum=-15.576;QD=51.97;ReadPosRankSum=1.164;VQSLOD=4.5339;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,120,5981	1/1:0,10:10:12.04:335,12,0	0/0:20,0:20:59.04:0,59,1546	0/0:22,0:22:57.75:0,58,1706	1/1:0,17:17:20.99:548,21,0	0/0:23,0:23:69.24:0,69,3467	0/0:36,0:36:99:0,108,4933	1/1:2,28:30:84.25:1759,84,0	1/1:1,21:22:42.10:1332,42,0	1/1:0,26:26:71.94:1735,72,0	1/1:0,17:17:24.04:730,24,0	0/0:33,0:33:99:0,99,4837	0/0:25,0:25:75.26:0,75,3429	0/0:29,0:29:87.30:0,87,4205	1/1:0,21:21:45.15:1394,45,0	1/1:0,15:15:33.11:1117,33,0	1/1:2,31:33:42.14:1375,42,0	1/1:1,18:19:24.08:744,24,0	0/0:16,0:16:44.18:0,44,1988	0/0:19,0:19:54.17:0,54,2522	0/0:46,0:46:99:0,132,6122	0/0:22,0:22:57.20:0,57,2550	1/1:0,10:10:11.96:305,12,0	1/1:2,23:25:12.04:406,12,0	0/0:15,0:15:45.10:0,45,1932	1/1:0,27:27:66.22:1890,66,0	1/1:0,21:21:48.16:1562,48,0	1/1:0,4:4:6.02:203,6,0
chr10	13438892	.	A	AATGG	18510.04	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-9.380;DP=791;FS=3.238;HRun=0;HaplotypeScore=128.4272;InbreedingCoeff=0.9095;MQ=67.71;MQ0=4;MQRankSum=0.344;QD=28.83;ReadPosRankSum=-0.103;VQSLOD=4.6301;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:23,17:41:42.14:995,42,0	1/1:3,10:14:30.10:708,30,0	0/0:32,0:19:3.01:0,3,46	0/0:27,0:18:4.96:0,5,78	1/1:11,11:23:33.07:661,33,0	1/1:17,12:30:30.10:708,30,0	1/1:15,10:26:24.08:558,24,0	1/1:47,0:47:45.01:555,45,0	1/1:15,17:33:42.14:994,42,0	1/1:12,19:32:60.18:1225,60,0	1/1:4,6:11:18.06:426,18,0	1/1:10,19:29:45.15:1066,45,0	1/1:13,16:29:33.11:779,33,0	1/1:13,20:35:45.15:1049,45,0	1/1:15,19:36:27.56:641,28,0	1/1:11,28:40:69.04:1634,69,0	1/1:3,7:10:18.06:426,18,0	1/1:15,11:27:24.08:569,24,0	0/0:20,0:28:23.82:0,24,203	0/0:6,0:21:33.51:0,34,308	0/0:19,0:40:39.05:0,39,370	1/1:12,13:25:36.12:814,36,0	1/1:8,16:25:38.84:922,39,0	1/1:11,6:17:15.05:355,15,0	1/1:11,15:26:24.08:567,24,0	1/1:15,20:35:57.17:1237,57,0	1/1:13,25:42:57.20:1339,57,0	1/1:2,6:8:12.04:284,12,0
chr10	13440540	.	AG	A	7077.78	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=14.826;DP=837;FS=1.371;HRun=1;HaplotypeScore=83.7781;InbreedingCoeff=1.0000;MQ=82.04;MQ0=0;MQRankSum=-2.144;QD=37.65;ReadPosRankSum=4.216;VQSLOD=5.3729;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,50:50:99:1971,141,0	0/0:18,0:18:54.17:0,54,837	0/0:22,0:22:66.22:0,66,1052	0/0:36,0:36:99:0,99,1487	0/0:32,0:32:87.30:0,87,1386	0/0:21,0:21:63.21:0,63,1005	0/0:28,0:28:84.29:0,84,1341	0/0:37,0:37:99:0,108,1705	0/0:31,0:31:90.29:0,90,1412	0/0:36,0:36:99:0,105,1648	0/0:26,0:26:66.23:0,66,1055	1/1:0,33:33:90.30:1258,90,0	1/1:0,24:24:54.18:755,54,0	1/1:0,30:30:78.26:1090,78,0	0/0:39,0:39:99:0,117,1796	0/0:44,0:44:99:0,129,2035	0/0:27,0:27:81.28:0,81,1290	0/0:33,0:33:99:0,99,1574	0/0:19,0:19:57.19:0,57,909	0/0:24,0:24:72.25:0,72,1148	0/0:39,0:39:99:0,117,1862	1/1:0,26:26:75.25:1040,75,0	0/0:24,0:24:69.20:0,69,1053	0/0:39,0:38:99:0,114,1770	1/1:0,25:24:69.23:965,69,0	0/0:24,0:24:72.25:0,72,1151	0/0:27,0:27:78.27:0,78,1227	0/0:23,0:23:69.24:0,69,1103
chr10	13440834	.	G	GAA	8515.66	PASS	AB=0.580;AC=43;AF=0.768;AN=56;BaseQRankSum=-10.400;DP=721;FS=9.851;HRun=12;HaplotypeScore=108.5865;InbreedingCoeff=0.6312;MQ=65.61;MQ0=8;MQRankSum=-1.890;QD=15.74;ReadPosRankSum=-0.960;VQSLOD=2.8088;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:12,0:17:3.56:154,4,0	1/1:0,8:10:29.07:351,29,0	0/0:37,0:23:18.96:0,19,194	0/0:40,2:13:6.21:0,6,43	1/1:11,24:37:33.11:683,33,0	0/1:7,0:20:10.98:104,0,11	0/1:4,1:17:21.56:95,0,22	1/1:14,11:28:38.63:374,39,0	1/1:9,11:21:30.05:372,30,0	1/1:9,23:37:71.97:863,72,0	1/1:2,16:19:38.38:358,38,0	1/1:7,0:28:20.40:180,20,0	1/1:4,0:16:6.01:57,6,0	1/1:11,0:14:13.31:89,13,0	1/1:6,23:30:39.08:512,39,0	1/1:8,16:28:35.59:443,36,0	1/1:15,10:26:7.85:573,8,0	1/1:3,20:25:37.93:452,38,0	0/0:30,0:30:49.80:0,50,175	0/0:39,0:39:22.42:0,22,126	0/0:29,0:29:44.01:0,44,122	1/1:18,0:23:44.38:358,44,0	1/1:2,14:18:23.56:283,24,0	0/1:5,16:21:9.19:385,0,9	1/1:5,0:31:19.35:261,19,0	1/1:14,5:21:43.27:439,43,0	1/1:5,25:30:54.18:744,54,0	1/1:2,18:22:29.59:387,30,0
chr10	13440842	.	A	AG	3545.87	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=-11.778;DP=721;FS=0.404;HRun=0;HaplotypeScore=109.7717;InbreedingCoeff=0.8062;MQ=62.17;MQ0=14;MQRankSum=1.667;QD=28.60;ReadPosRankSum=3.795;VQSLOD=3.8826;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:50.33:0,50,373	0/0:12,0:12:22.34:0,22,186	0/0:44,0:19:36.65:0,37,370	0/0:51,0:14:5.59:0,6,65	0/0:34,0:34:73.89:0,74,516	0/1:19,0:19:5.40:5,0,112	0/0:18,0:18:5.90:0,6,161	0/0:22,0:22:46.02:0,46,339	0/0:17,0:17:38.34:0,38,259	0/0:32,0:32:83.33:0,83,570	0/0:20,0:20:29.61:0,30,265	0/0:27,0:27:29.31:0,29,205	0/0:17,0:17:20.45:0,20,148	0/0:10,0:10:29.33:0,29,198	0/0:27,0:27:43.87:0,44,279	0/0:26,0:26:39.37:0,39,273	0/0:28,0:27:49.68:0,50,418	0/0:26,0:25:32.27:0,32,227	1/1:2,32:34:96.14:1126,96,0	1/1:1,41:42:99:1538,120,0	1/1:0,29:29:66.22:876,66,0	0/0:21,0:21:57.07:0,57,368	0/0:19,0:19:28.23:0,28,192	0/0:20,0:20:38.24:0,38,264	0/0:34,0:34:43.82:0,44,316	0/0:23,0:23:45.51:0,46,333	0/0:27,0:27:55.71:0,56,340	0/0:22,0:22:31.25:0,31,213
chr10	13442261	.	GC	G	8538.14	PASS	AC=34;AF=0.654;AN=52;BaseQRankSum=-1.456;DP=496;FS=16.060;HRun=3;HaplotypeScore=76.3987;InbreedingCoeff=0.9977;MQ=48.23;MQ0=19;MQRankSum=4.130;QD=29.04;ReadPosRankSum=1.010;VQSLOD=3.1845;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:43:99:0,111,1531	1/1:1,6:7:18.06:223,18,0	./.	./.	1/1:0,15:14:36.11:446,36,0	1/1:0,16:16:42.13:520,42,0	1/1:2,11:11:24.07:291,24,0	1/1:1,19:20:51.13:614,51,0	1/1:0,12:12:33.10:409,33,0	1/1:4,13:15:39.12:483,39,0	1/1:2,18:19:38.41:479,38,0	0/0:19,0:18:54.13:0,54,752	0/0:20,0:20:57.19:0,57,818	0/0:22,0:22:60.09:0,60,859	1/1:2,17:19:42.13:517,42,0	1/1:0,19:19:54.17:669,54,0	1/1:3,22:25:23.21:735,23,0	1/1:3,20:21:51.16:632,51,0	0/0:19,0:16:48.13:0,48,664	0/0:19,0:18:41.86:0,42,552	0/0:21,0:20:45.13:0,45,610	0/0:13,0:13:33.07:0,33,439	1/1:2,15:16:39.08:466,39,0	1/1:0,22:22:47.82:594,48,0	0/0:19,0:19:48.16:0,48,685	1/1:2,17:18:39.10:458,39,0	1/1:0,17:17:51.16:632,51,0	1/1:3,10:10:30.09:372,30,0
chr10	13442286	.	GAAAAAAAAAAA	G	4939.07	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=2.048;DP=465;FS=10.946;HRun=21;HaplotypeScore=150.8755;InbreedingCoeff=0.9516;MQ=46.23;MQ0=22;MQRankSum=-4.981;QD=40.16;ReadPosRankSum=7.411;VQSLOD=-0.7216;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:26,16:39:13.73:1304,14,0	0/0:2,0:3:9.02:0,9,260	0/0:13,0:5:14.08:0,14,377	0/0:9,0:3:9.03:0,9,324	0/0:18,0:18:36.12:0,36,1466	0/0:19,0:22:45.15:0,45,1418	0/0:6,0:6:12.04:0,12,385	0/0:20,0:21:33.58:0,34,1321	0/0:8,0:9:21.07:0,21,871	0/0:12,0:14:30.05:0,30,1076	0/0:15,0:16:30.10:0,30,1355	1/1:7,7:14:20.64:570,21,0	1/1:4,16:20:44.86:1266,45,0	1/1:8,9:17:23.17:674,23,0	0/0:13,0:14:27.08:0,27,1079	0/0:14,0:15:22.63:0,23,826	0/0:20,0:21:42.09:0,42,1607	0/0:21,0:21:48.14:0,48,1985	0/0:10,0:11:27.09:0,27,814	0/0:8,0:15:33.11:0,33,1040	0/0:14,0:16:24.08:0,24,702	1/1:6,7:13:17.73:468,18,0	0/0:11,0:14:18.06:0,18,585	0/0:20,0:23:36.73:0,37,1306	1/1:7,8:15:23.62:658,24,0	0/0:12,0:13:18.06:0,18,731	0/0:16,0:16:39.13:0,39,1646	0/0:10,0:7:18.06:0,18,764
chr10	13442424	.	GA	G	8918.98	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=3.791;DP=486;FS=3.548;HRun=8;HaplotypeScore=52.7399;InbreedingCoeff=0.9753;MQ=64.68;MQ0=1;MQRankSum=-1.198;QD=21.70;ReadPosRankSum=2.396;VQSLOD=5.3279;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,31:37:75.10:724,75,0	1/1:1,5:6:15.02:144,15,0	0/0:15,0:9:23.61:0,24,193	0/0:13,0:8:8.96:0,9,89	1/1:3,16:18:45.07:432,45,0	1/1:0,22:22:48.01:452,48,0	1/1:2,18:20:45.07:435,45,0	1/1:4,28:30:75.03:711,75,0	1/1:3,14:17:39.06:376,39,0	1/1:3,12:15:36.04:343,36,0	1/1:0,10:10:30:280,30,0	1/1:3,20:23:48.08:463,48,0	1/1:2,15:17:33:308,33,0	1/1:2,17:19:51.08:492,51,0	1/1:2,9:11:21.03:203,21,0	1/1:4,15:19:39.06:376,39,0	1/1:1,22:23:60.10:579,60,0	1/1:0,19:19:39.06:376,39,0	0/0:19,0:19:51.14:0,51,589	0/0:20,0:20:48.14:0,48,570	0/0:8,0:8:15.01:0,15,156	1/1:2,9:11:24.03:232,24,0	1/1:2,14:16:36.05:346,36,0	1/1:1,11:13:23.07:209,23,0	1/1:1,11:12:27.04:261,27,0	1/1:3,15:18:45.05:425,45,0	1/1:2,19:21:51.08:492,51,0	1/1:0,11:11:27.04:260,27,0
chr10	13442696	.	GC	G	3049.65	PASS	AB=0.826;AC=35;AF=0.625;AN=56;BaseQRankSum=-9.727;DP=484;FS=10.730;HRun=12;HaplotypeScore=70.9661;InbreedingCoeff=0.6909;MQ=72.67;MQ0=1;MQRankSum=1.997;QD=9.65;ReadPosRankSum=-0.709;VQSLOD=1.6538;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,105,619	1/1:4,7:11:17.92:139,18,0	0/1:16,0:15:0.70:1,0,93	0/1:15,2:15:1.67:2,0,80	1/1:7,7:15:19.89:138,20,0	1/1:7,8:16:4.78:190,5,0	1/1:8,20:28:56.73:438,57,0	1/1:12,15:27:26.77:202,27,0	1/1:1,7:8:17.92:137,18,0	1/1:9,2:12:13.73:88,14,0	1/1:4,2:8:4.95:29,5,0	0/0:20,0:20:47.01:0,47,300	0/0:23,0:23:67.64:0,68,442	0/0:20,0:20:55.79:0,56,357	1/1:7,16:23:14.76:255,15,0	1/1:5,14:19:40.83:308,41,0	1/1:1,10:11:26.90:209,27,0	1/1:4,25:29:62.73:488,63,0	0/0:8,0:12:22.05:0,22,151	0/1:6,0:10:0:0,0,0	0/0:7,0:11:8.68:0,9,54	0/0:20,0:20:49.76:0,50,299	0/1:2,4:6:15.86:37,0,16	0/1:6,7:14:7.50:122,0,8	0/0:21,0:21:53.01:0,53,343	1/1:12,10:24:23.84:182,24,0	1/1:2,12:15:28.92:215,29,0	1/1:3,4:7:8.96:69,9,0
chr10	13443103	.	TGGGTC	T	3777.22	PASS	AB=0.901;AC=27;AF=0.482;AN=56;BaseQRankSum=8.664;DP=357;FS=26.034;HRun=0;HaplotypeScore=91.4251;InbreedingCoeff=-0.1701;MQ=32.18;MQ0=5;MQRankSum=-0.764;QD=14.25;ReadPosRankSum=0.509;VQSLOD=1.4222;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,1:30:16.65:0,17,563	1/1:6,0:6:6.22:109,6,0	0/0:6,0:1:3.01:0,3,51	0/0:4,0:2:1.19:0,1,3	0/1:4,0:4:19.59:20,0,20	1/1:15,4:21:16.77:511,17,0	1/1:11,2:16:41.48:403,41,0	0/1:16,3:20:64.70:458,0,65	0/1:7,6:13:25.66:288,0,26	0/1:4,0:4:33.16:33,0,54	0/1:4,0:4:25.10:25,0,58	0/0:10,0:13:4.29:0,4,223	0/0:12,0:13:5.20:0,5,360	0/1:18,1:23:98.89:99,0,456	0/1:12,2:16:13.54:354,0,14	1/1:18,2:21:28.69:430,29,0	0/1:13,6:19:59.19:310,0,59	0/1:7,0:8:37.07:115,0,37	0/1:15,0:15:23.96:24,0,281	0/1:8,0:8:31.92:32,0,72	0/1:16,0:14:4.05:4,0,153	0/0:12,0:12:19.57:0,20,274	1/1:5,0:5:11.40:136,11,0	1/1:5,1:7:6.27:45,6,0	0/0:10,0:11:6.07:0,6,290	0/1:19,1:20:99:345,0,158	0/1:9,0:9:27.22:27,0,64	0/1:3,0:2:8.32:8,0,21
chr10	13443108	.	C	CTTT	4561.43	PASS	AB=1.000;AC=33;AF=0.635;AN=52;BaseQRankSum=-0.361;DP=368;FS=0.620;HRun=10;HaplotypeScore=94.0637;InbreedingCoeff=0.7768;MQ=32.01;MQ0=5;MQRankSum=-2.242;QD=20.64;ReadPosRankSum=-1.979;VQSLOD=2.9694;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:29:1.60:0,2,260	1/1:2,3:6:12.04:196,12,0	./.	./.	1/1:2,4:6:5.98:77,6,0	1/1:14,8:23:41.74:502,42,0	1/1:15,7:20:40.91:581,41,0	1/1:13,9:22:42.99:628,43,0	1/1:11,0:13:23.77:229,24,0	1/1:4,1:7:8.89:126,9,0	1/1:3,1:4:3.01:58,3,0	0/0:13,0:14:3.22:0,3,148	0/0:13,0:13:22.19:0,22,269	0/0:23,0:23:28.08:0,28,347	1/1:9,4:17:25.05:277,25,0	1/1:6,12:21:46.96:725,47,0	1/1:15,4:19:20.72:186,21,0	1/1:3,5:9:12.03:198,12,0	0/0:16,0:16:36:0,36,413	0/0:6,0:6:2.98:0,3,36	0/0:13,0:12:14.94:0,15,160	0/0:13,0:13:14.37:0,14,152	1/1:1,3:5:12.04:186,12,0	1/1:4,5:9:9.21:60,9,0	0/0:11,0:11:11.78:0,12,145	1/1:12,7:20:27.55:451,28,0	1/1:8,2:10:6.01:83,6,0	0/1:3,0:2:0:0,0,0
chr10	13445494	.	A	AGCTCTCTT	38512.82	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-0.536;DP=633;FS=3.010;HRun=0;HaplotypeScore=188.9131;InbreedingCoeff=0.9886;MQ=78.61;MQ0=2;MQRankSum=-14.292;QD=81.08;ReadPosRankSum=3.470;VQSLOD=5.2748;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,15:25:51.18:2098,51,0	1/1:5,4:10:18.06:686,18,0	0/0:43,0:34:66.27:0,66,1593	0/0:46,0:34:33.28:0,33,1570	1/1:8,6:19:23.87:697,24,0	1/1:1,6:11:21.07:881,21,0	1/1:9,13:25:42.10:1671,42,0	1/1:20,17:43:90.25:3364,90,0	1/1:4,10:14:36.12:1495,36,0	1/1:7,11:20:54.18:1987,54,0	1/1:3,3:8:15.05:586,15,0	1/1:12,11:25:57.20:2252,57,0	1/1:11,13:26:63.22:2515,63,0	1/1:13,21:36:78.27:3170,78,0	1/1:8,18:30:60.14:2361,60,0	1/1:9,15:26:54.19:2190,54,0	1/1:8,14:25:48.16:1976,48,0	1/1:4,6:12:18.06:710,18,0	0/0:18,0:18:45.14:0,45,1097	0/0:20,0:20:48.14:0,48,1187	0/0:31,0:31:75.24:0,75,1915	1/1:6,15:22:48.16:1917,48,0	1/1:3,3:8:18.06:660,18,0	1/1:6,10:19:23.95:826,24,0	1/1:6,11:17:45.15:1797,45,0	1/1:10,9:22:48.16:1743,48,0	1/1:2,12:15:42.14:1729,42,0	1/1:2,10:16:30.10:1202,30,0
chr10	13445507	.	GGTT	G	75.67	PASS	AB=0.807;AC=4;AF=0.071;AN=56;BaseQRankSum=6.069;DP=531;FS=5.114;HRun=0;HaplotypeScore=229.9203;InbreedingCoeff=-0.0883;MQ=75.66;MQ0=7;MQRankSum=-3.810;QD=0.86;ReadPosRankSum=2.000;VQSLOD=2.3994;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:16,3:18:41.45:0,41,368	0/0:5,0:5:8.95:0,9,122	0/0:43,0:28:72.89:0,73,1344	0/0:50,0:35:73.11:0,73,1458	0/0:15,0:15:16.98:0,17,203	0/0:15,0:14:24.07:0,24,377	0/0:16,0:16:34.98:0,35,573	0/0:27,0:26:61.96:0,62,1245	0/0:15,0:14:37.41:0,37,466	0/0:14,0:14:41.77:0,42,727	0/0:6,0:6:14.74:0,15,110	0/1:13,5:18:77.11:77,0,297	0/1:16,7:23:71.39:71,0,495	0/1:22,5:27:24.25:24,0,601	0/0:22,0:22:49.44:0,49,439	0/0:18,0:18:14.79:0,15,470	0/0:19,0:17:38.48:0,38,533	0/0:9,0:9:15.85:0,16,246	0/0:18,0:18:50.21:0,50,928	0/0:17,0:17:47.91:0,48,958	0/0:31,0:31:79.93:0,80,1520	0/1:16,4:20:8.17:8,0,217	0/0:8,0:7:15.03:0,15,169	0/0:16,0:16:12.81:0,13,188	0/0:13,2:15:2.85:0,3,325	0/0:18,0:18:46.69:0,47,944	0/0:13,0:13:38.64:0,39,556	0/0:14,0:14:15.03:0,15,301
chr10	13445526	.	TCTCTC	T	802.26	PASS	AB=0.819;AC=7;AF=0.125;AN=56;BaseQRankSum=8.269;DP=567;FS=1.619;HRun=0;HaplotypeScore=196.8304;InbreedingCoeff=-0.1644;MQ=50.33;MQ0=16;MQRankSum=-5.835;QD=6.86;ReadPosRankSum=6.413;VQSLOD=2.4435;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:14,1:16:29.79:30,0,48	0/0:8,0:7:9.03:0,9,197	0/0:32,0:12:25.16:0,25,270	0/0:44,0:20:43.06:0,43,506	0/0:22,0:22:5.75:0,6,76	0/0:29,0:28:15.55:0,16,193	0/0:23,0:23:24.03:0,24,424	0/0:25,0:22:56.73:0,57,790	0/0:19,0:18:30.10:0,30,388	0/0:24,0:23:66.22:0,66,1218	0/0:10,0:10:2.85:0,3,38	0/1:9,4:14:17.04:241,0,17	0/1:10,6:17:99:271,0,120	0/1:15,4:19:60.39:202,0,60	0/1:26,0:26:16.19:16,0,112	0/0:21,0:21:21.94:0,22,460	0/0:25,0:23:40.68:0,41,628	0/0:14,0:14:30.98:0,31,428	0/0:22,0:22:60.20:0,60,938	0/0:13,0:13:31.04:0,31,446	0/0:35,0:34:69.70:0,70,1201	0/1:10,4:14:23.27:97,0,23	0/0:17,0:14:2.85:0,3,38	0/0:18,0:18:8.52:0,9,149	0/1:8,2:10:64.21:74,0,64	0/0:24,0:24:69.23:0,69,1515	0/0:14,0:13:24.07:0,24,377	0/0:11,0:10:18.06:0,18,318
chr10	13449143	.	C	CTCCT	4103.82	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-5.877;DP=425;FS=11.765;HRun=0;HaplotypeScore=122.5283;InbreedingCoeff=0.9047;MQ=85.98;MQ0=0;MQRankSum=-7.637;QD=55.46;ReadPosRankSum=-0.649;VQSLOD=4.6718;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,30:32:69.07:1654,69,0	0/0:1,0:1:3.01:0,3,40	0/0:17,0:17:45.06:0,45,725	0/0:21,0:21:38.75:0,39,612	0/0:8,0:8:24.05:0,24,378	0/0:17,0:17:39.13:0,39,709	0/0:31,0:31:68.91:0,69,1243	0/0:28,0:28:75.26:0,75,1387	0/0:22,0:22:57.20:0,57,1055	0/0:11,0:11:30.10:0,30,560	0/0:6,0:6:12.03:0,12,186	1/1:2,8:10:15.05:379,15,0	1/1:0,11:11:27.09:718,27,0	1/1:1,11:12:36.12:875,36,0	0/0:22,0:22:43.79:0,44,805	0/0:26,0:26:66.19:0,66,1128	0/0:28,0:28:81.20:0,81,1401	0/0:18,0:18:45.15:0,45,840	0/0:13,0:13:27.08:0,27,475	0/0:8,0:8:21.07:0,21,391	0/0:20,0:20:48.16:0,48,896	1/1:0,6:6:12.04:319,12,0	0/0:9,0:9:18.06:0,18,319	0/0:15,0:15:26.11:0,26,395	1/1:1,2:3:6.02:160,6,0	0/0:11,0:11:33.11:0,33,571	0/0:17,0:17:41.77:0,42,746	0/0:2,0:2:6.02:0,6,112
chr10	13451336	.	TG	T	6991.65	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=10.136;DP=805;FS=0.301;HRun=3;HaplotypeScore=100.0906;InbreedingCoeff=0.9961;MQ=81.40;MQ0=2;MQRankSum=-1.017;QD=33.45;ReadPosRankSum=3.823;VQSLOD=4.8839;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,44:46:99:1488,120,0	0/0:8,0:8:24.08:0,24,345	0/0:22,0:22:57.60:0,58,736	0/0:24,0:24:54.17:0,54,768	0/0:11,0:11:33.11:0,33,475	0/0:17,0:17:51.17:0,51,732	0/0:32,0:32:93.31:0,93,1339	0/0:40,0:40:99:0,108,1506	0/0:29,0:29:84.26:0,84,1171	0/0:30,0:30:87.29:0,87,1253	0/0:9,0:9:27.09:0,27,388	1/1:0,41:41:99:1413,114,0	1/1:0,32:32:84.26:1041,84,0	1/1:2,47:49:99:1636,132,0	0/0:44,0:44:99:0,126,1774	0/0:50,0:49:99:0,151,2159	0/0:26,0:26:72.24:0,72,1032	0/0:33,0:33:99:0,99,1410	0/0:22,0:22:63.18:0,63,886	0/0:23,0:23:66.22:0,66,949	0/0:40,0:38:99:0,108,1544	1/1:0,18:18:54.17:669,54,0	0/0:26,0:26:78.25:0,78,1104	0/0:38,0:38:99:0,114,1601	1/1:1,22:23:60.19:744,60,0	0/0:44,0:44:99:0,129,1822	0/0:23,0:23:69.20:0,69,971	0/0:5,0:5:15.05:0,15,216
chr10	13452071	.	C	CT	19675.32	PASS	AB=0.917;AC=35;AF=0.625;AN=56;BaseQRankSum=-19.659;DP=796;FS=1.166;HRun=0;HaplotypeScore=68.6400;InbreedingCoeff=0.9016;MQ=72.04;MQ0=0;MQRankSum=-1.495;QD=41.42;ReadPosRankSum=1.184;VQSLOD=5.5074;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:60,0:59:99:0,175,2400	1/1:0,12:12:29.99:479,30,0	0/0:9,1:10:0.86:0,1,275	0/1:10,0:11:6.94:7,0,253	1/1:0,23:23:57.19:910,57,0	1/1:2,34:36:84.29:1342,84,0	1/1:0,29:29:84.29:1343,84,0	1/1:1,26:27:78.22:1198,78,0	1/1:0,29:29:81.28:1295,81,0	1/1:0,29:29:87.29:1370,87,0	1/1:1,17:18:51.17:815,51,0	0/0:30,0:30:90.26:0,90,1229	0/0:30,0:30:90.30:0,90,1256	0/0:27,0:27:78.22:0,78,1066	1/1:0,45:45:99:1775,111,0	1/1:0,32:32:87.30:1391,87,0	1/1:0,35:35:87.30:1391,87,0	1/1:0,25:25:69.24:1103,69,0	0/0:25,0:25:69.14:0,69,919	0/0:26,0:26:75.25:0,75,1045	0/0:70,0:70:99:0,205,2806	0/0:19,0:19:57.18:0,57,776	1/1:0,15:15:39.13:623,39,0	1/1:3,35:38:51.41:1397,51,0	0/0:24,0:24:66.22:0,66,920	1/1:2,27:29:81.26:1272,81,0	1/1:0,28:28:84.29:1342,84,0	1/1:0,14:14:39.13:623,39,0
chr10	13452312	.	C	CGA	36898.03	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-16.480;DP=862;FS=8.424;HRun=0;HaplotypeScore=88.7081;InbreedingCoeff=0.9988;MQ=86.22;MQ0=2;MQRankSum=-6.253;QD=54.42;ReadPosRankSum=5.583;VQSLOD=5.2496;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,53:55:99:3047,151,0	1/1:1,8:9:21.07:426,21,0	0/0:27,0:27:72.19:0,72,1082	0/0:32,0:32:81.26:0,81,1239	1/1:3,29:32:84.29:1705,84,0	1/1:2,25:29:78.27:1583,78,0	1/1:0,33:34:84.29:1695,84,0	1/1:2,32:34:99:2059,102,0	1/1:0,19:20:54.19:1096,54,0	1/1:0,21:22:66.21:1237,66,0	1/1:2,19:21:57.20:1156,57,0	1/1:0,28:29:78.27:1584,78,0	1/1:2,33:35:93.32:1885,93,0	1/1:2,20:24:60.21:1217,60,0	1/1:4,37:41:99:2253,111,0	1/1:1,47:51:99:2558,126,0	1/1:0,42:42:99:2558,126,0	1/1:0,27:27:75.26:1523,75,0	0/0:37,0:37:99:0,105,1703	0/0:35,0:35:99:0,105,1710	0/0:53,0:53:99:0,160,2589	1/1:1,24:25:63.21:1279,63,0	1/1:2,15:17:42.14:852,42,0	1/1:1,35:36:99:2072,102,0	1/1:1,26:28:72.25:1463,72,0	1/1:3,21:24:66.23:1340,66,0	1/1:0,29:30:87.30:1763,87,0	1/1:0,11:11:27.09:548,27,0
chr10	13453605	.	G	GGGAA	4404.02	PASS	AB=0.854;AC=26;AF=0.520;AN=50;BaseQRankSum=-8.867;DP=594;FS=8.655;HRun=0;HaplotypeScore=107.2452;InbreedingCoeff=0.5630;MQ=64.83;MQ0=6;MQRankSum=1.016;QD=13.59;ReadPosRankSum=-2.505;VQSLOD=3.3085;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:29:24.03:0,24,223	1/1:8,0:8:3.01:70,3,0	./.	./.	1/1:6,2:14:9.83:87,10,0	1/1:19,5:24:9.03:209,9,0	0/1:25,0:25:14.85:102,0,15	./.	1/1:14,11:26:21.54:489,22,0	1/1:9,7:17:20.93:313,21,0	1/1:6,6:14:9.03:209,9,0	0/0:9,0:23:21.02:0,21,195	0/0:15,0:26:17.95:0,18,167	0/0:11,0:20:18.02:0,18,168	0/1:20,11:32:18.62:531,0,19	1/1:16,8:26:15.05:349,15,0	0/1:20,14:35:46.21:847,0,46	1/1:21,9:30:12.04:274,12,0	0/0:20,0:19:0.36:0,0,48	0/0:17,0:17:15.02:0,15,140	0/1:27,0:26:15.54:16,0,97	0/0:8,0:18:18.42:0,18,168	0/0:18,0:19:30.07:0,30,397	0/0:29,0:29:39.13:0,39,593	0/0:7,0:14:15.02:0,15,140	1/1:10,3:13:9:143,9,0	1/1:11,12:24:20.90:487,21,0	1/1:2,5:7:12.04:279,12,0
chr10	13453623	.	G	GAAGG	4417.96	PASS	AB=0.943;AC=29;AF=0.537;AN=54;BaseQRankSum=-9.039;DP=586;FS=11.218;HRun=0;HaplotypeScore=105.6852;InbreedingCoeff=0.5551;MQ=58.92;MQ0=9;MQRankSum=-0.594;QD=11.72;ReadPosRankSum=-1.814;VQSLOD=3.1650;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:24.03:0,24,223	1/1:10,0:10:3.01:70,3,0	./.	0/1:12,0:6:0:0,0,0	1/1:18,0:17:9.83:87,10,0	1/1:20,0:20:9.03:209,9,0	0/1:12,7:20:14.85:102,0,15	1/1:32,0:31:5.87:14,6,0	1/1:25,0:25:21.54:489,22,0	1/1:16,0:16:20.93:313,21,0	1/1:18,0:18:9.03:209,9,0	0/0:28,0:28:21.02:0,21,195	0/0:27,0:27:18.02:0,18,168	0/0:19,0:19:18.02:0,18,168	0/1:31,0:30:18.62:531,0,19	1/1:24,0:24:15.05:349,15,0	0/1:38,0:38:46.21:848,0,46	1/1:35,0:33:12.04:274,12,0	0/0:15,0:14:0.36:0,0,48	0/0:15,0:15:15.02:0,15,140	0/1:30,0:29:15.07:15,0,97	0/0:16,0:16:18.42:0,18,168	0/0:17,0:17:30.07:0,30,397	0/0:22,0:22:39.13:0,39,593	0/0:12,0:12:15.02:0,15,140	1/1:11,0:11:9:143,9,0	1/1:27,0:27:20.90:487,21,0	1/1:10,0:10:12.04:279,12,0
chr10	13453632	.	AAG	A	78.33	PASS	AB=0.793;AC=3;AF=0.054;AN=56;BaseQRankSum=9.565;DP=593;FS=1.840;HRun=0;HaplotypeScore=97.7651;InbreedingCoeff=-0.0582;MQ=58.59;MQ0=9;MQRankSum=1.395;QD=1.28;ReadPosRankSum=9.482;VQSLOD=0.4290;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:40.31:0,40,667	0/0:11,0:11:33.11:0,33,565	0/0:13,0:7:20.40:0,20,243	0/0:14,0:7:18.53:0,19,248	0/0:19,0:18:48.16:0,48,802	0/0:17,0:17:45.14:0,45,651	0/0:18,0:18:33.11:0,33,550	0/0:36,0:35:99:0,104,1499	0/0:25,0:25:60.66:0,61,869	0/0:18,0:18:54.18:0,54,916	0/0:20,0:20:57.18:0,57,876	0/0:27,0:27:26.59:0,27,532	0/0:23,0:23:30.32:0,30,512	0/0:19,0:19:24.28:0,24,429	0/0:29,0:28:72.24:0,72,1083	0/0:25,0:25:60.19:0,60,873	0/0:41,0:41:99:0,102,1548	0/0:34,0:32:75.25:0,75,1139	0/1:15,3:17:28.01:28,0,260	0/1:9,5:14:82.41:82,0,138	0/1:21,8:28:67.94:68,0,406	0/0:18,0:18:27.02:0,27,433	0/0:17,0:17:47.19:0,47,888	0/0:20,0:20:60.21:0,60,1148	0/0:13,0:13:13.39:0,13,255	0/0:10,0:10:30.10:0,30,478	0/0:26,0:26:57.19:0,57,874	0/0:10,0:10:27.09:0,27,393
chr10	13454776	.	TA	T	7392.57	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=5.109;DP=537;FS=6.900;HRun=8;HaplotypeScore=165.5801;InbreedingCoeff=0.9659;MQ=66.40;MQ0=0;MQRankSum=-7.233;QD=22.20;ReadPosRankSum=0.327;VQSLOD=3.0645;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:81.08:0,81,883	1/1:0,5:5:15.02:145,15,0	0/0:14,0:14:5.96:0,6,202	0/0:12,0:12:7.06:0,7,159	1/1:4,17:21:44.95:407,45,0	1/1:1,22:23:63.10:607,63,0	1/1:3,13:16:38.99:360,39,0	1/1:7,20:27:66.07:624,66,0	1/1:2,15:17:45.06:428,45,0	1/1:3,20:23:57.08:549,57,0	1/1:4,24:28:74.49:652,74,0	0/0:21,0:21:60.11:0,60,679	0/0:19,0:19:54.14:0,54,605	0/0:22,0:22:63.15:0,63,712	1/1:6,19:25:60.01:562,60,0	1/1:6,16:22:48.07:463,48,0	1/1:3,15:18:33.01:310,33,0	1/1:6,4:10:15:138,15,0	0/0:15,0:15:36.11:0,36,431	0/0:28,0:28:78.20:0,78,879	0/0:7,0:7:18.04:0,18,201	0/0:21,0:21:51.02:0,51,562	1/1:3,16:19:41.29:368,41,0	1/1:2,10:12:21.03:203,21,0	0/0:16,0:16:39.03:0,39,415	1/1:4,12:16:39:364,39,0	1/1:6,31:37:93:866,93,0	1/1:1,13:14:36.05:347,36,0
chr10	13455697	.	T	TGGG	6462.98	PASS	AB=0.695;AC=46;AF=0.821;AN=56;BaseQRankSum=-1.275;DP=522;FS=16.597;HRun=9;HaplotypeScore=122.2083;InbreedingCoeff=0.2879;MQ=79.09;MQ0=0;MQRankSum=-5.444;QD=13.14;ReadPosRankSum=1.987;VQSLOD=1.4968;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:10,0:33:19.99:20,0,48	1/1:2,4:6:9.03:173,9,0	0/0:13,0:14:26.92:0,27,305	0/1:18,0:19:43.97:44,0,100	0/1:5,2:7:0:0,0,0	1/1:8,0:20:14.95:118,15,0	1/1:1,0:26:55.76:398,56,0	1/1:14,2:17:17.96:203,18,0	1/1:1,0:24:45.62:350,46,0	1/1:11,2:16:17.99:226,18,0	1/1:10,0:10:20.75:266,21,0	1/1:2,0:21:21.18:46,21,0	0/1:9,0:30:29.63:30,0,46	1/1:5,0:19:18.33:40,18,0	1/1:9,14:29:57.11:925,57,0	1/1:6,14:22:30.09:536,30,0	1/1:6,10:17:20.79:356,21,0	1/1:6,6:13:24.08:421,24,0	1/1:4,0:15:32.97:363,33,0	1/1:5,0:16:20.94:137,21,0	0/1:12,0:32:2.52:199,0,3	0/0:12,0:16:2.29:0,2,37	1/1:9,2:13:2.33:59,2,0	1/1:2,21:26:44.64:810,45,0	0/1:5,0:15:8.46:8,0,25	1/1:11,5:17:14.97:229,15,0	1/1:9,2:17:18:230,18,0	1/1:6,5:12:15.05:276,15,0
chr10	13465655	.	AG	A	753.54	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=2.468;DP=473;FS=0.691;HRun=9;HaplotypeScore=81.3959;InbreedingCoeff=0.9120;MQ=76.58;MQ0=4;MQRankSum=-0.200;QD=15.38;ReadPosRankSum=2.754;VQSLOD=3.9771;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:35:90.06:0,90,988	0/0:4,0:4:9.03:0,9,103	0/0:32,0:17:18.34:0,18,151	0/0:17,0:15:17.97:0,18,145	0/0:12,0:11:24.02:0,24,241	1/1:3,20:22:45.02:410,45,0	1/1:3,23:26:51.02:465,51,0	0/0:15,0:14:20.69:0,21,202	0/0:10,0:10:21.06:0,21,239	0/0:18,0:16:39.06:0,39,423	0/0:5,0:5:8.99:0,9,75	0/0:13,0:12:30.07:0,30,333	0/0:12,0:12:27.06:0,27,297	0/0:14,0:13:26.71:0,27,270	0/0:22,0:20:45.08:0,45,478	0/0:18,0:17:45.11:0,45,505	0/0:28,0:27:75.11:0,75,817	0/0:18,0:18:47.92:0,48,503	0/0:18,0:18:25.47:0,25,267	0/0:7,0:8:11.97:0,12,112	0/0:17,0:17:31.31:0,31,290	0/0:15,0:15:37.51:0,38,426	0/0:17,0:17:41.96:0,42,423	0/0:14,0:13:29.97:0,30,300	0/0:8,0:8:21.02:0,21,219	0/0:10,0:10:27.01:0,27,283	0/0:25,0:25:66.18:0,66,743	0/0:14,0:14:39.08:0,39,423
chr10	13465762	.	T	TTTA	680.76	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=0.618;DP=453;FS=1.630;HRun=0;HaplotypeScore=97.9076;InbreedingCoeff=0.7721;MQ=58.14;MQ0=6;MQRankSum=-2.825;QD=17.46;ReadPosRankSum=0.204;VQSLOD=3.5873;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:69.14:0,69,864	0/0:5,0:4:8.12:0,8,47	0/0:15,0:8:15.42:0,15,162	0/0:25,0:14:22.53:0,23,250	0/0:16,0:13:32.32:0,32,273	0/0:20,0:20:41.80:0,42,415	0/0:18,0:16:20.33:0,20,354	0/0:27,0:23:50.82:0,51,440	0/0:8,0:7:17.18:0,17,144	0/0:15,0:14:22.29:0,22,294	0/0:8,0:7:20.62:0,21,162	0/0:17,0:17:29.68:0,30,357	0/0:12,0:12:24.05:0,24,299	0/0:12,0:11:27.52:0,28,347	0/0:23,0:21:41.80:0,42,425	0/0:20,0:20:44.34:0,44,526	0/0:35,0:33:86.67:0,87,792	0/0:23,0:23:35.84:0,36,364	1/1:10,10:20:35.60:465,36,0	1/1:2,3:5:6.02:97,6,0	1/1:6,5:11:0.01:239,0,0	0/0:6,0:6:16.98:0,17,197	0/0:7,0:7:9.18:0,9,73	0/0:17,0:14:9.50:0,9,183	0/0:13,0:12:24.04:0,24,320	0/0:12,0:12:22.69:0,23,199	0/0:18,0:17:34.37:0,34,303	0/0:11,0:11:15.58:0,16,154
chr10	13465765	.	G	GTT	6110.93	PASS	AB=0.756;AC=51;AF=0.911;AN=56;BaseQRankSum=-3.148;DP=448;FS=3.928;HRun=12;HaplotypeScore=67.4437;InbreedingCoeff=0.2330;MQ=58.95;MQ0=6;MQRankSum=-0.461;QD=14.08;ReadPosRankSum=2.898;VQSLOD=3.5547;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,1:27:48.71:203,49,0	1/1:1,4:4:8.70:95,9,0	0/0:14,0:8:10.89:0,11,90	0/1:21,1:12:20.77:21,0,60	1/1:5,10:14:22.11:265,22,0	1/1:5,14:20:24.89:342,25,0	1/1:8,8:16:33.07:414,33,0	1/1:7,17:22:22.54:550,23,0	1/1:2,6:8:15.05:207,15,0	1/1:3,11:15:14.22:210,14,0	0/1:5,3:7:10.31:134,0,10	1/1:4,0:16:4.28:31,4,0	1/1:5,0:12:10.08:36,10,0	1/1:7,0:10:9.77:32,10,0	1/1:6,18:22:23.92:337,24,0	1/1:10,10:20:14.78:181,15,0	1/1:17,14:35:47.19:758,47,0	1/1:6,15:23:43.36:521,43,0	1/1:22,0:20:37.53:335,38,0	1/1:5,0:4:6.01:57,6,0	1/1:9,0:9:17.99:163,18,0	1/1:4,0:6:5.69:19,6,0	1/1:0,6:7:14.96:154,15,0	1/1:2,8:14:27.76:259,28,0	0/1:4,0:13:19.18:19,0,21	1/1:3,6:9:17.85:218,18,0	1/1:5,14:18:21.54:295,22,0	1/1:5,5:12:22.92:256,23,0
chr10	13465898	.	CT	C	1233.99	PASS	AB=0.933;AC=7;AF=0.125;AN=56;BaseQRankSum=7.220;DP=406;FS=16.450;HRun=3;HaplotypeScore=36.4877;InbreedingCoeff=0.8206;MQ=55.52;MQ0=16;MQRankSum=0.733;QD=22.85;ReadPosRankSum=1.631;VQSLOD=1.8603;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:20:60.17:0,60,819	0/0:4,0:4:12.04:0,12,171	0/0:12,1:2:6.02:0,6,86	0/0:17,0:8:21.07:0,21,302	0/0:16,0:16:45.03:0,45,629	0/0:22,0:22:66.22:0,66,950	0/0:6,0:6:18.06:0,18,259	0/0:33,0:24:63.19:0,63,858	0/0:4,0:4:12.04:0,12,173	0/0:15,0:15:42.14:0,42,604	0/0:14,0:14:39.13:0,39,562	0/0:7,0:7:15.05:0,15,215	0/0:5,0:5:9.03:0,9,130	0/0:5,0:5:12.04:0,12,173	0/0:15,0:15:45.15:0,45,644	0/1:13,1:14:1.08:1,0,439	0/0:33,0:33:93.21:0,93,1312	0/0:21,0:21:63.21:0,63,902	1/1:1,14:13:39.12:482,39,0	1/1:0,17:17:51.16:632,51,0	1/1:1,7:7:21.07:260,21,0	0/0:15,0:15:45.15:0,45,648	0/0:12,0:12:36.11:0,36,500	0/0:18,0:18:48.16:0,48,691	0/0:16,0:16:45.15:0,45,648	0/0:11,0:11:33.11:0,33,475	0/0:12,0:12:36.12:0,36,518	0/0:17,0:17:39.13:0,39,562
chr10	13465956	.	T	TA	1367.14	PASS	AB=0.889;AC=13;AF=0.232;AN=56;BaseQRankSum=-7.806;DP=314;FS=15.798;HRun=7;HaplotypeScore=29.6269;InbreedingCoeff=0.7533;MQ=63.35;MQ0=5;MQRankSum=0.677;QD=21.70;ReadPosRankSum=0.421;VQSLOD=1.6842;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,22:22:60.18:725,60,0	0/0:6,0:6:15.02:0,15,145	0/1:7,1:6:21.61:22,0,57	0/0:6,0:3:3:0,3,29	0/0:10,0:10:27.02:0,27,250	0/0:21,0:21:63.09:0,63,603	0/0:8,0:8:24.04:0,24,232	0/0:39,0:35:90.10:0,90,854	0/0:7,0:7:21.03:0,21,202	0/0:11,0:11:24.02:0,24,229	0/0:8,0:8:18.02:0,18,168	1/1:2,7:8:18.06:217,18,0	1/1:0,5:5:12.04:145,12,0	1/1:1,5:6:12.04:145,12,0	0/0:7,0:7:21.03:0,21,203	0/0:2,0:2:6:0,6,53	0/0:34,0:34:90.12:0,90,862	0/0:14,0:14:30:0,30,280	0/0:16,0:15:42.06:0,42,402	0/0:9,0:9:27.04:0,27,261	0/0:3,0:3:6:0,6,52	1/1:2,1:3:3.01:36,3,0	0/0:4,0:4:12.02:0,12,116	0/0:3,0:3:6:0,6,58	1/1:2,8:10:21.06:254,21,0	0/0:16,0:16:48.07:0,48,458	0/0:9,0:9:27.04:0,27,261	0/0:18,0:18:44.20:0,44,433
chr10	13466788	.	A	ATTCTT	16706.78	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-3.214;DP=476;FS=5.279;HRun=0;HaplotypeScore=98.5091;InbreedingCoeff=0.7171;MQ=64.06;MQ0=0;MQRankSum=-4.960;QD=37.38;ReadPosRankSum=3.441;VQSLOD=4.1261;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:15,1:16:21.07:505,21,0	1/1:2,1:3:6.02:154,6,0	0/0:14,0:11:9.39:0,9,140	0/0:14,0:12:13.65:0,14,121	1/1:25,1:26:62.88:1125,63,0	1/1:23,0:22:27.09:613,27,0	1/1:12,0:11:9.03:204,9,0	1/1:18,0:18:29.88:417,30,0	1/1:9,0:9:15.05:340,15,0	1/1:22,0:22:51.15:1066,51,0	1/1:16,0:16:33.10:749,33,0	1/1:12,0:12:21.07:476,21,0	1/1:21,0:20:42.14:950,42,0	1/1:18,1:19:36.11:823,36,0	1/1:27,0:23:48.16:1062,48,0	1/1:26,0:24:42.14:947,42,0	1/1:10,0:10:12.04:272,12,0	1/1:22,0:21:24.08:535,24,0	1/1:12,0:12:29.97:430,30,0	1/1:20,0:20:42.01:855,42,0	1/1:11,0:11:6.01:119,6,0	1/1:3,0:3:5.93:85,6,0	1/1:13,1:14:24:502,24,0	1/1:11,0:11:6.02:136,6,0	1/1:32,0:32:57.19:1285,57,0	1/1:29,0:28:75.14:1568,75,0	1/1:28,0:26:57.19:1292,57,0	1/1:5,0:5:9.03:197,9,0
chr10	13466796	.	C	CTTTTCT	25412.64	PASS	AB=0.556;AC=51;AF=0.911;AN=56;BaseQRankSum=-6.003;DP=517;FS=7.512;HRun=0;HaplotypeScore=81.0491;InbreedingCoeff=0.5967;MQ=58.05;MQ0=0;MQRankSum=-5.672;QD=51.76;ReadPosRankSum=4.846;VQSLOD=4.4157;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,13:20:21.07:657,21,0	1/1:1,1:2:6.02:161,6,0	0/0:15,0:10:20.53:0,21,207	0/0:11,0:8:17.33:0,17,162	1/1:1,28:32:77.95:1715,78,0	1/1:4,19:22:5.47:876,5,0	1/1:0,9:9:9.03:300,9,0	1/1:4,14:18:42.05:942,42,0	1/1:1,7:10:15.05:498,15,0	1/1:3,20:25:60.15:1622,60,0	1/1:1,21:23:42.08:1182,42,0	1/1:0,13:14:21.07:700,21,0	1/1:1,18:22:41.90:1396,42,0	1/1:7,14:23:36.11:1148,36,0	1/1:0,26:23:48.16:1532,48,0	1/1:2,23:24:20.71:1368,21,0	1/1:2,10:13:9.03:300,9,0	1/1:2,17:21:27.09:843,27,0	1/1:2,13:17:46.35:1010,46,0	1/1:1,22:23:45.01:1263,45,0	1/1:7,0:10:15.04:372,15,0	1/1:0,2:2:5.93:117,6,0	1/1:1,11:14:24:669,24,0	0/1:2,8:10:15.61:191,0,16	1/1:1,37:40:57.19:1891,57,0	1/1:0,30:30:87.27:2474,87,0	1/1:1,27:27:57.19:1900,57,0	1/1:1,4:5:4.27:285,4,0
chr10	13468182	.	C	CA	12288.88	PASS	AB=0.847;AC=54;AF=0.964;AN=56;BaseQRankSum=-2.114;DP=671;FS=2.266;HRun=1;HaplotypeScore=114.5318;InbreedingCoeff=-0.0374;MQ=87.46;MQ0=0;MQRankSum=-5.413;QD=18.31;ReadPosRankSum=5.582;VQSLOD=5.3230;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:48,0:48:99:920,134,0	1/1:6,0:6:17.78:119,18,0	0/1:24,3:28:95.81:256,0,96	0/1:14,5:19:53.30:192,0,53	1/1:26,0:25:68.51:541,69,0	1/1:18,0:18:44.48:308,44,0	1/1:19,0:19:50.27:328,50,0	1/1:24,0:24:66.87:404,67,0	1/1:18,0:18:50.46:354,50,0	1/1:19,0:19:55.57:414,56,0	1/1:12,0:12:33.95:258,34,0	1/1:30,0:30:82.95:557,83,0	1/1:31,0:31:77.09:532,77,0	1/1:25,0:25:62.27:430,62,0	1/1:38,0:38:99:707,104,0	1/1:35,0:35:97.68:652,98,0	1/1:22,0:22:59.41:420,59,0	1/1:17,0:17:47.42:325,47,0	1/1:25,0:25:50.98:448,51,0	1/1:16,0:16:47.70:377,48,0	1/1:42,0:42:99:834,122,0	1/1:19,1:20:53.41:403,53,0	1/1:19,0:19:53.43:385,53,0	1/1:20,0:20:36.39:356,36,0	1/1:23,0:23:62.07:403,62,0	1/1:28,0:28:79.61:517,80,0	1/1:26,0:26:71.19:493,71,0	1/1:17,0:17:47.67:355,48,0
chr10	13468415	.	C	CA	1432.45	PASS	AB=0.970;AC=45;AF=0.804;AN=56;BaseQRankSum=4.605;DP=549;FS=4.448;HRun=8;HaplotypeScore=186.9915;InbreedingCoeff=0.1201;MQ=59.05;MQ0=3;MQRankSum=-4.193;QD=2.88;ReadPosRankSum=-2.281;VQSLOD=-0.6057;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:25:1.48:1,0,13	1/1:4,0:4:1.41:3,1,0	0/0:45,0:28:6.28:0,6,212	0/1:27,0:16:5.95:6,0,147	1/1:30,0:28:9.66:69,10,0	0/1:17,0:17:5.03:18,0,5	1/1:13,0:13:0.15:21,0,0	1/1:34,0:32:21.15:83,21,0	1/1:9,0:9:4.16:16,4,0	1/1:28,0:28:23.01:144,23,0	1/1:14,1:14:20.86:126,21,0	0/1:17,0:17:2.51:29,0,3	1/1:13,0:13:1.91:21,2,0	1/1:20,0:20:10.81:48,11,0	1/1:20,0:20:10.21:68,10,0	1/1:23,0:23:23.47:128,23,0	1/1:30,0:30:30.36:167,30,0	1/1:18,0:18:12.93:62,13,0	0/1:15,1:16:19.89:48,0,20	0/1:16,1:17:15.42:66,0,15	0/1:15,1:16:16.88:17,0,31	1/1:14,0:14:8.56:36,9,0	1/1:11,0:11:8.76:57,9,0	0/0:6,0:6:0.21:0,0,1	1/1:14,0:14:3.45:64,3,0	1/1:20,0:20:24.34:142,24,0	1/1:22,0:20:16.25:86,16,0	1/1:22,0:22:11.86:41,12,0
chr10	13468422	.	AAC	A	4026.89	PASS	AB=0.987;AC=42;AF=0.750;AN=56;BaseQRankSum=-6.563;DP=537;FS=7.820;HRun=0;HaplotypeScore=122.5236;InbreedingCoeff=-0.1692;MQ=58.60;MQ0=4;MQRankSum=0.618;QD=8.18;ReadPosRankSum=-6.632;VQSLOD=0.9577;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:34,0:33:39.55:252,40,0	1/1:4,0:4:6.40:45,6,0	0/0:45,0:21:41.91:0,42,390	0/1:31,0:17:20.89:21,0,202	1/1:30,0:28:13.34:194,13,0	1/1:25,0:25:72.06:675,72,0	1/1:15,0:15:35.98:325,36,0	0/1:28,0:26:53.39:53,0,70	0/1:8,0:8:7.91:13,0,8	1/1:23,0:23:2.28:143,2,0	0/1:16,0:15:4.09:39,0,4	1/1:19,0:19:37.38:313,37,0	1/1:10,0:10:2.30:90,2,0	1/1:17,0:17:19.45:219,19,0	0/1:15,0:15:4.37:90,0,4	0/1:20,0:20:67.96:68,0,69	0/1:28,0:28:38.56:165,0,39	0/1:17,0:17:7.64:98,0,8	1/1:15,1:16:10.38:187,10,0	1/1:18,1:19:15.98:230,16,0	0/1:13,3:16:13.17:80,0,13	1/1:17,0:17:26.11:222,26,0	0/1:9,0:9:12.20:36,0,12	1/1:4,0:4:2.50:18,2,0	1/1:13,0:13:14.05:115,14,0	0/1:21,0:21:24.38:85,0,24	0/1:20,0:18:41.45:90,0,41	1/1:17,0:17:4.09:161,4,0
chr10	13468423	.	AC	A	6176.53	PASS	AB=0.917;AC=53;AF=0.946;AN=56;BaseQRankSum=-2.386;DP=527;FS=9.740;HRun=1;HaplotypeScore=108.1445;InbreedingCoeff=0.5324;MQ=60.84;MQ0=4;MQRankSum=-3.195;QD=12.79;ReadPosRankSum=2.108;VQSLOD=3.0529;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:33,1:33:49.64:345,50,0	1/1:4,0:4:9.80:67,10,0	0/0:43,1:21:34.49:0,34,290	0/1:30,3:19:25.84:26,0,183	1/1:30,0:28:57.07:351,57,0	1/1:22,2:24:72.05:662,72,0	1/1:13,1:14:35.97:313,36,0	1/1:28,0:26:38.18:177,38,0	1/1:8,0:8:10.54:57,11,0	1/1:23,0:23:47.17:285,47,0	1/1:15,0:14:23.51:142,24,0	1/1:19,0:19:55.07:422,55,0	1/1:9,0:9:22.08:154,22,0	1/1:16,0:16:45.33:336,45,0	1/1:14,0:14:21.98:156,22,0	1/1:20,0:20:38.26:200,38,0	1/1:28,0:28:49.85:294,50,0	1/1:16,0:16:21.12:140,21,0	1/1:14,1:15:37.92:275,38,0	1/1:19,0:19:49.23:374,49,0	1/1:15,0:15:28.31:196,28,0	1/1:16,1:17:36.42:251,36,0	1/1:9,0:9:15.36:93,15,0	1/1:3,0:3:2.76:18,3,0	1/1:13,0:13:33.63:224,34,0	1/1:21,0:21:34.06:187,34,0	1/1:19,0:17:30.96:177,31,0	1/1:17,0:17:38.40:255,38,0
chr10	13468438	.	A	AC	1040.39	PASS	AB=0.545;AC=5;AF=0.089;AN=56;BaseQRankSum=-4.595;DP=543;FS=1.292;HRun=0;HaplotypeScore=127.0605;InbreedingCoeff=0.6766;MQ=57.58;MQ0=3;MQRankSum=0.565;QD=20.81;ReadPosRankSum=1.975;VQSLOD=5.2636;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:35:40.65:0,41,305	0/0:5,0:5:14.90:0,15,113	0/0:35,0:17:42.69:0,43,358	0/0:25,0:13:18.56:0,19,246	0/0:34,0:32:72.80:0,73,468	0/0:23,0:23:63.43:0,63,545	0/0:12,0:12:27.43:0,27,226	0/0:32,0:30:77.88:0,78,582	0/0:11,0:11:23.30:0,23,154	0/0:19,0:19:55.79:0,56,380	0/0:15,0:14:15.90:0,16,140	0/0:25,0:25:71.28:0,71,558	0/0:12,0:12:32.82:0,33,259	0/0:16,0:16:44.44:0,44,311	0/0:14,0:14:30.90:0,31,213	0/0:21,0:21:56.35:0,56,340	0/0:29,0:28:51.71:0,52,397	0/0:19,0:18:37.97:0,38,263	1/1:11,7:18:12.76:393,13,0	1/1:6,8:14:7.99:363,8,0	0/1:3,15:18:23.81:402,0,24	0/0:17,0:17:34.71:0,35,240	0/0:15,0:15:34.89:0,35,217	0/0:5,0:5:4.79:0,5,26	0/0:17,0:17:43.95:0,44,326	0/0:26,0:26:60.93:0,61,460	0/0:19,0:17:47.33:0,47,337	0/0:11,0:11:29.40:0,29,214
chr10	13468442	.	A	AC	797.60	PASS	AB=0.863;AC=8;AF=0.143;AN=56;BaseQRankSum=1.542;DP=573;FS=9.907;HRun=0;HaplotypeScore=134.6742;InbreedingCoeff=0.3785;MQ=62.72;MQ0=3;MQRankSum=1.542;QD=6.28;ReadPosRankSum=3.320;VQSLOD=3.0227;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:14,20:33:31.29:75,0,31	0/0:6,0:6:16.17:0,16,122	0/0:33,0:17:39.02:0,39,307	0/0:27,0:16:22.65:0,23,292	0/0:33,0:31:60.25:0,60,389	0/0:21,0:21:44.89:0,45,453	0/0:10,0:10:23.99:0,24,206	0/0:38,0:36:83.58:0,84,627	0/0:11,0:11:21.08:0,21,135	0/0:20,0:20:50.67:0,51,355	0/0:18,0:17:24.03:0,24,181	0/1:28,1:29:23.02:301,0,23	0/1:11,1:12:14.39:98,0,14	0/1:13,1:14:51.25:122,0,51	0/0:15,0:15:35.37:0,35,247	0/0:27,0:27:65.96:0,66,456	0/0:29,0:28:63.20:0,63,412	0/0:22,0:21:39.82:0,40,292	0/0:21,0:21:31.41:0,31,255	0/0:15,0:15:21.66:0,22,138	0/0:20,0:20:18.44:0,18,138	1/1:3,2:21:17.09:112,17,0	0/0:16,0:16:30.72:0,31,207	0/0:7,0:7:8.92:0,9,62	1/1:16,1:17:8.16:231,8,0	0/0:27,0:27:67.20:0,67,470	0/0:20,0:18:48.84:0,49,343	0/0:10,0:10:29.20:0,29,205
chr10	13468508	.	C	CTGAT	3513.76	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=3.496;DP=518;FS=22.186;HRun=0;HaplotypeScore=96.6989;InbreedingCoeff=0.9721;MQ=93.17;MQ0=0;MQRankSum=-6.777;QD=56.67;ReadPosRankSum=-3.077;VQSLOD=2.3347;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:57.20:0,57,1053	0/0:8,0:8:24.08:0,24,448	0/0:22,0:22:51.10:0,51,865	0/0:26,0:26:43.87:0,44,1052	0/0:13,0:13:39.13:0,39,728	0/0:21,0:21:54.17:0,54,977	0/0:26,0:26:66.21:0,66,1193	0/0:15,0:14:42.13:0,42,707	0/0:18,0:18:51.16:0,51,919	0/0:18,0:18:48.15:0,48,814	0/0:3,0:3:9.03:0,9,168	0/0:30,0:30:90.29:0,90,1639	0/0:15,0:15:45.15:0,45,839	0/0:22,0:22:66.21:0,66,1193	0/0:19,0:19:54.17:0,54,977	0/0:21,0:21:63.22:0,63,1176	0/0:32,0:32:93.32:0,93,1735	0/0:23,0:22:57.20:0,57,1064	1/1:6,10:16:45.11:1058,45,0	1/1:5,5:12:14.97:280,15,0	1/1:6,27:34:84.72:2176,85,0	0/0:13,0:13:33.11:0,33,616	0/0:8,0:8:24.07:0,24,417	0/0:15,0:15:42.14:0,42,783	0/0:16,0:16:48.16:0,48,890	0/0:13,0:13:33.04:0,33,578	0/0:19,0:19:57.20:0,57,1064	0/0:12,0:12:33.11:0,33,616
chr10	13472249	.	TA	T	2641.16	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.825;DP=816;FS=6.562;HRun=3;HaplotypeScore=76.9961;InbreedingCoeff=0.9999;MQ=87.40;MQ0=0;MQRankSum=-1.492;QD=32.21;ReadPosRankSum=-1.219;VQSLOD=3.1377;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:57:99:0,163,2289	0/0:12,0:12:36.12:0,36,517	0/0:32,0:32:96.29:0,96,1320	0/0:24,0:24:69.18:0,69,947	0/0:21,0:21:60.20:0,60,863	0/0:21,0:21:60.16:0,60,841	0/0:27,0:27:81.26:0,81,1147	0/0:38,0:38:99:0,105,1482	0/0:27,0:27:78.26:0,78,1123	0/0:30,0:30:90.29:0,90,1270	0/0:24,0:24:66.22:0,66,950	0/0:44,0:44:99:0,123,1771	0/0:32,0:32:96.32:0,96,1382	0/0:28,0:28:84.27:0,84,1193	0/0:39,0:39:99:0,117,1685	0/0:28,0:27:81.27:0,81,1167	0/0:36,0:36:99:0,105,1510	0/0:28,0:28:81.27:0,81,1166	1/1:1,22:23:63.20:776,63,0	1/1:0,14:14:39.12:483,39,0	1/1:1,44:45:99:1525,123,0	0/0:23,0:23:66.22:0,66,950	0/0:25,0:25:75.25:0,75,1074	0/0:34,0:34:99:0,102,1469	0/0:16,0:16:45.15:0,45,648	0/0:32,0:32:93.31:0,93,1339	0/0:35,0:34:99:0,99,1424	0/0:21,0:21:63.21:0,63,907
chr10	13472902	.	AT	A	12391.56	PASS	AB=0.564;AC=51;AF=0.911;AN=56;BaseQRankSum=-3.189;DP=642;FS=6.350;HRun=10;HaplotypeScore=67.7256;InbreedingCoeff=0.7774;MQ=78.26;MQ0=0;MQRankSum=-4.247;QD=20.41;ReadPosRankSum=3.769;VQSLOD=5.8814;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,18:20:50.99:443,51,0	1/1:0,13:13:35.99:313,36,0	0/0:15,0:15:27.07:0,27,294	0/0:20,0:20:32.76:0,33,308	1/1:3,25:28:74.98:651,75,0	1/1:3,17:20:28.35:387,28,0	1/1:4,27:31:71.98:625,72,0	1/1:7,26:33:77.89:663,78,0	1/1:4,18:23:56.01:474,56,0	1/1:2,24:27:60.66:611,61,0	1/1:4,20:24:59.75:494,60,0	1/1:3,20:23:53.98:469,54,0	1/1:6,21:27:53.98:469,54,0	1/1:2,20:22:59.99:521,60,0	1/1:3,20:23:47.97:416,48,0	1/1:5,17:22:11.80:331,12,0	1/1:3,20:23:53.98:469,54,0	0/1:5,17:22:12.37:363,0,12	1/1:5,14:19:38.97:339,39,0	1/1:0,25:25:62.97:546,63,0	1/1:1,22:23:62.99:547,63,0	1/1:0,16:16:44.99:391,45,0	1/1:1,22:23:26.83:462,27,0	1/1:0,22:25:66.10:539,66,0	1/1:4,10:14:26.99:234,27,0	1/1:6,22:28:65.95:567,66,0	1/1:2,27:29:65.96:573,66,0	1/1:2,22:24:56.98:495,57,0
chr10	13474564	.	T	TC	6128.86	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-2.930;DP=556;FS=13.723;HRun=2;HaplotypeScore=66.0259;InbreedingCoeff=0.9967;MQ=78.06;MQ0=0;MQRankSum=-2.185;QD=35.02;ReadPosRankSum=1.335;VQSLOD=3.9895;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,30:33:90.30:1295,90,0	0/0:9,0:9:27.08:0,27,334	0/0:12,0:12:33.10:0,33,398	0/0:14,0:14:33.30:0,33,373	0/0:14,0:14:33.10:0,33,408	0/0:6,0:6:15.05:0,15,186	0/0:28,0:28:78.21:0,78,938	0/0:24,0:24:54.16:0,54,659	0/0:14,0:14:42.13:0,42,519	0/0:15,0:15:39.12:0,39,482	0/0:9,0:9:27.08:0,27,325	1/1:1,19:20:48.16:691,48,0	1/1:2,25:27:69.23:992,69,0	1/1:0,20:20:45.15:648,45,0	0/0:22,0:22:57.18:0,57,704	0/0:20,0:20:54.17:0,54,669	0/0:42,0:42:99:0,123,1508	0/0:43,0:43:99:0,123,1507	1/1:2,10:12:30.10:432,30,0	1/1:1,12:13:30.10:432,30,0	1/1:3,24:27:57.05:820,57,0	1/1:1,10:11:27.09:388,27,0	0/0:15,0:15:45.13:0,45,545	0/0:35,0:35:99:0,105,1297	1/1:0,12:12:30.10:431,30,0	0/0:22,0:22:57.16:0,57,685	0/0:17,0:17:45.14:0,45,557	0/0:20,0:20:57.18:0,57,706
chr10	13474920	.	C	CT	8217.51	PASS	AB=0.617;AC=31;AF=0.554;AN=56;BaseQRankSum=-11.958;DP=611;FS=1.558;HRun=10;HaplotypeScore=62.6315;InbreedingCoeff=0.8178;MQ=71.39;MQ0=0;MQRankSum=-0.728;QD=21.51;ReadPosRankSum=0.174;VQSLOD=5.7125;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,1:32:54.05:0,54,635	1/1:1,3:4:9.02:96,9,0	0/0:19,0:15:29.39:0,29,223	0/0:11,0:12:7.39:0,7,71	1/1:4,24:28:66.04:667,66,0	1/1:6,22:28:29.45:498,29,0	0/1:4,11:16:10.85:300,0,11	0/1:8,5:14:0.81:158,0,1	1/1:4,17:22:47.99:494,48,0	1/1:7,18:25:29.46:504,29,0	1/1:6,19:27:41.08:573,41,0	0/0:19,0:22:51.97:0,52,399	0/0:21,0:21:56.92:0,57,468	0/0:25,1:26:24.89:0,25,409	1/1:5,16:21:18.71:394,19,0	1/1:7,21:28:14.21:559,14,0	1/1:7,38:45:66.48:1075,66,0	1/1:4,23:27:60.02:623,60,0	0/0:13,0:14:34.98:0,35,277	0/0:22,1:23:18.92:0,19,359	0/0:5,0:5:14.98:0,15,123	0/0:11,0:12:28.27:0,28,226	0/1:4,15:19:1.15:400,0,1	1/1:1,12:13:11.45:327,11,0	0/0:42,0:42:82.39:0,82,805	1/1:6,23:30:47.36:679,47,0	1/1:2,26:28:47.54:711,48,0	1/1:1,6:7:15.04:160,15,0
chr10	13476295	.	T	TAC	480.12	PASS	AB=0.978;AC=27;AF=0.614;AN=44;BaseQRankSum=-2.152;DP=484;FS=0.000;HRun=0;HaplotypeScore=156.6804;InbreedingCoeff=0.3811;MQ=57.77;MQ0=14;MQRankSum=0.904;QD=1.77;ReadPosRankSum=1.205;VQSLOD=2.5032;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:0.88:0,1,2	1/1:11,1:13:3.01:44,3,0	./.	./.	0/1:18,0:18:0.02:0,0,1	0/1:10,0:9:0:0,0,0	0/1:20,0:20:0:0,0,0	./.	0/0:20,0:21:2.73:0,3,14	1/1:23,0:23:6.01:72,6,0	1/1:15,0:15:2.60:26,3,0	1/1:11,4:16:3.01:44,3,0	1/1:24,0:24:6.01:70,6,0	0/1:19,0:19:0.01:0,0,0	0/0:14,0:15:8.82:0,9,77	0/0:20,0:19:5.98:0,6,52	0/1:14,2:16:2.72:78,0,3	1/1:8,0:7:1.83:4,2,0	./.	./.	1/1:22,0:22:2.74:12,3,0	1/1:16,0:16:5.99:50,6,0	0/0:9,0:9:2.99:0,3,23	0/0:15,0:15:5.45:0,5,43	1/1:22,0:21:3.01:43,3,0	1/1:16,0:15:3.46:25,3,0	./.	1/1:8,5:12:9.50:131,10,0
chr10	13479813	.	A	AACAC	1244.04	PASS	AB=1.000;AC=22;AF=0.440;AN=50;BaseQRankSum=-0.629;DP=619;FS=1.921;HRun=0;HaplotypeScore=145.9948;InbreedingCoeff=0.3416;MQ=64.66;MQ0=24;MQRankSum=-0.168;QD=3.72;ReadPosRankSum=0.595;VQSLOD=2.5543;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:33,0:30:5.97:77,6,0	0/0:11,0:11:6.02:0,6,92	./.	./.	0/0:21,0:19:6.02:0,6,90	0/0:24,0:24:15.09:0,15,189	0/1:32,0:31:26.75:27,0,133	./.	0/0:13,0:11:5.93:0,6,73	0/1:19,0:19:43.17:43,0,158	0/0:8,0:9:3:0,3,28	1/1:20,2:20:15.03:268,15,0	1/1:22,1:22:23.91:302,24,0	1/1:27,1:27:20.98:289,21,0	0/0:19,0:19:15:0,15,183	0/1:30,0:28:34.28:34,0,223	0/0:27,0:27:29.04:0,29,332	0/0:20,0:18:4.65:0,5,14	0/0:10,0:10:3:0,3,28	1/1:17,0:16:2.50:9,2,0	1/1:36,0:29:7.83:63,8,0	1/1:17,10:26:12.04:263,12,0	0/0:13,0:10:9.02:0,9,132	0/0:43,0:44:48.02:0,48,610	1/1:13,0:12:2.68:11,3,0	0/1:22,0:22:5.72:6,0,105	0/1:23,0:22:17.42:17,0,89	0/1:9,0:8:0.30:0,0,20
chr10	13479950	.	T	TCACACACACA	5833.35	PASS	AB=0.850;AC=46;AF=0.885;AN=52;BaseQRankSum=-4.000;DP=649;FS=2.642;HRun=0;HaplotypeScore=208.3063;InbreedingCoeff=0.0324;MQ=62.39;MQ0=6;MQRankSum=-1.536;QD=10.51;ReadPosRankSum=-0.717;VQSLOD=3.2847;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:23:9.22:159,0,9	1/1:7,0:7:2.99:25,3,0	./.	./.	1/1:24,0:24:4.31:109,4,0	1/1:23,0:23:14.96:219,15,0	1/1:30,0:30:15.03:234,15,0	1/1:19,0:17:8.99:140,9,0	1/1:12,7:23:5.88:244,6,0	1/1:23,0:23:32.96:639,33,0	1/1:13,0:13:2.94:25,3,0	0/0:13,0:24:5.80:0,6,59	0/1:18,0:19:65.06:65,0,141	0/1:25,0:37:57.14:57,0,103	1/1:16,0:23:2.90:90,3,0	1/1:33,0:32:37.43:758,37,0	1/1:34,0:34:27.90:577,28,0	1/1:9,0:12:7.27:214,7,0	1/1:19,0:17:14.97:334,15,0	1/1:13,0:13:3.01:69,3,0	1/1:29,0:27:3.01:96,3,0	1/1:14,0:14:9.03:154,9,0	1/1:21,0:21:3.01:56,3,0	1/1:27,7:39:3.01:148,3,0	0/1:16,0:25:7.49:7,0,54	1/1:31,0:30:40.76:653,41,0	1/1:14,0:14:21.03:424,21,0	1/1:4,1:6:9.03:337,9,0
chr10	13481306	.	AAC	A	5334.62	PASS	AB=0.901;AC=30;AF=0.536;AN=56;BaseQRankSum=11.840;DP=622;FS=2.626;HRun=0;HaplotypeScore=76.5721;InbreedingCoeff=0.4204;MQ=70.36;MQ0=10;MQRankSum=1.335;QD=12.95;ReadPosRankSum=2.475;VQSLOD=4.7558;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:10,32:44:69.20:832,69,0	0/0:9,0:9:24.08:0,24,385	0/0:46,0:19:19.58:0,20,250	0/1:51,0:34:31.04:31,0,512	0/0:13,1:14:2.94:0,3,537	1/1:3,12:15:24.07:290,24,0	1/1:4,20:26:50.67:593,51,0	0/1:28,3:31:51.66:52,0,757	0/0:19,0:19:54.18:0,54,865	0/0:18,1:19:5.93:0,6,543	0/1:9,2:11:39.27:39,0,397	1/1:5,16:21:36.11:434,36,0	1/1:3,10:13:24.07:290,24,0	1/1:6,23:29:48.14:579,48,0	0/0:25,1:26:27:0,27,898	0/1:13,1:14:0.08:0,0,466	0/1:21,2:22:12.16:12,0,796	0/1:16,2:19:33.01:33,0,427	1/1:4,13:17:38.43:468,38,0	1/1:4,11:17:29.75:317,30,0	1/1:5,26:30:12.03:639,12,0	1/1:7,10:17:24.07:290,24,0	0/1:15,2:17:36.25:36,0,420	0/0:27,1:28:42.05:0,42,1142	1/1:0,11:12:32.93:376,33,0	0/0:22,1:23:24:0,24,847	0/0:25,1:26:37.59:0,38,1044	0/1:3,1:4:24.14:24,0,119
chr10	13481980	.	A	ATGG	5494.03	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-13.701;DP=744;FS=25.359;HRun=0;HaplotypeScore=132.3498;InbreedingCoeff=0.9994;MQ=58.30;MQ0=20;MQRankSum=0.735;QD=33.71;ReadPosRankSum=8.710;VQSLOD=3.3825;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:3,29:33:42.14:901,42,0	0/0:12,0:12:33.04:0,33,400	0/0:23,0:16:35.71:0,36,366	0/0:28,0:20:51.05:0,51,541	0/0:26,0:25:72.13:0,72,947	0/0:19,0:19:54.09:0,54,699	0/0:24,0:24:59.26:0,59,710	0/0:39,0:33:83.78:0,84,807	0/0:16,0:16:45.09:0,45,606	0/0:37,0:32:84.13:0,84,1044	0/0:34,0:33:81.02:0,81,1003	1/1:4,32:38:63.22:1322,63,0	1/1:1,30:33:51.18:1093,51,0	1/1:2,20:23:33.11:702,33,0	0/0:29,0:29:75.17:0,75,1029	0/0:28,0:28:78.18:0,78,1075	0/0:34,0:34:93.14:0,93,1289	0/0:22,0:22:36.88:0,37,710	0/0:22,0:19:47.68:0,48,482	0/0:20,0:20:45.10:0,45,628	0/0:57,0:55:99:0,141,1879	1/1:1,14:15:30.10:641,30,0	0/0:10,0:10:27.03:0,27,317	0/0:16,0:16:45.10:0,45,628	1/1:0,20:21:39.13:836,39,0	0/0:42,0:40:99:0,111,1413	0/0:30,0:29:87.04:0,87,1148	0/0:12,0:12:33.09:0,33,486
chr10	13483312	.	G	GC	22476.25	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-14.594;DP=756;FS=3.840;HRun=2;HaplotypeScore=66.8207;InbreedingCoeff=0.9930;MQ=82.13;MQ0=0;MQRankSum=-2.320;QD=38.95;ReadPosRankSum=3.151;VQSLOD=5.5501;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,45:50:99:1863,118,0	1/1:1,8:9:24.08:346,24,0	0/0:19,0:19:48.13:0,48,572	0/0:22,0:22:44.82:0,45,506	1/1:0,16:16:48.16:691,48,0	1/1:1,21:22:57.19:821,57,0	1/1:1,35:36:99:1426,99,0	1/1:2,35:37:99:1437,105,0	1/1:2,19:21:54.18:775,54,0	1/1:0,26:26:78.25:1104,78,0	1/1:0,14:14:33.11:473,33,0	1/1:2,25:27:69.23:992,69,0	1/1:1,23:24:57.15:797,57,0	1/1:1,26:27:72.24:1034,72,0	1/1:0,35:35:99:1512,105,0	1/1:1,23:24:63.21:907,63,0	1/1:2,41:43:99:1684,117,0	1/1:0,32:32:90.30:1296,90,0	0/0:28,0:28:81.25:0,81,1003	0/0:24,0:24:63.20:0,63,781	0/0:86,0:86:99:0,229,2786	1/1:0,16:16:45.15:647,45,0	1/1:0,8:8:24.08:346,24,0	1/1:2,30:32:90.26:1273,90,0	1/1:0,17:17:45.15:648,45,0	1/1:0,28:28:84.25:1171,84,0	1/1:2,21:23:60.20:864,60,0	1/1:1,9:10:12.85:372,13,0
chr10	13486070	.	C	CT	8481.34	PASS	AB=0.736;AC=45;AF=0.804;AN=56;BaseQRankSum=-4.653;DP=667;FS=4.223;HRun=11;HaplotypeScore=83.6272;InbreedingCoeff=0.5323;MQ=72.54;MQ0=3;MQRankSum=-1.112;QD=14.65;ReadPosRankSum=2.189;VQSLOD=5.4950;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,36:43:80.99:804,81,0	1/1:4,4:8:10.26:94,10,0	0/1:24,0:18:21.48:21,0,83	0/0:18,0:15:22.22:0,22,125	1/1:6,23:30:33.30:484,33,0	1/1:4,15:20:12.67:296,13,0	1/1:6,22:29:15.78:326,16,0	1/1:10,13:23:9.84:280,10,0	0/1:5,12:17:36.49:210,0,36	1/1:4,19:22:57.06:554,57,0	1/1:1,12:13:27.90:264,28,0	1/1:2,16:18:29.93:289,30,0	1/1:2,13:16:26.92:259,27,0	1/1:7,11:18:19.39:209,19,0	1/1:9,17:26:21.69:387,22,0	1/1:11,20:32:4.45:394,4,0	1/1:18,16:35:71.24:725,71,0	1/1:6,28:33:50.97:500,51,0	0/0:24,1:25:20.20:0,20,336	0/0:24,0:24:1.04:0,1,330	0/0:21,0:21:44.79:0,45,348	1/1:5,14:20:35.19:378,35,0	0/1:9,14:23:41.22:176,0,41	1/1:5,24:29:33.87:523,34,0	1/1:4,15:18:6.87:246,7,0	1/1:6,20:26:54.56:522,55,0	1/1:6,23:30:26.07:427,26,0	1/1:4,14:18:11.98:112,12,0
chr10	13486359	.	T	TTGTG	5687.63	PASS	AB=0.891;AC=44;AF=0.846;AN=52;BaseQRankSum=-3.582;DP=636;FS=1.152;HRun=0;HaplotypeScore=144.8460;InbreedingCoeff=0.2559;MQ=59.78;MQ0=16;MQRankSum=-0.620;QD=10.98;ReadPosRankSum=3.153;VQSLOD=4.5383;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:33,1:34:23.67:319,24,0	0/0:8,0:7:2.98:0,3,10	./.	./.	1/1:23,1:23:12.02:216,12,0	1/1:19,0:18:10.84:132,11,0	1/1:23,0:21:2.70:68,3,0	1/1:37,0:36:5.48:30,5,0	1/1:11,3:16:26.54:405,27,0	1/1:21,0:19:15.41:183,15,0	1/1:20,1:21:18.03:298,18,0	1/1:16,2:18:12.01:203,12,0	1/1:11,2:14:23.73:350,24,0	1/1:11,2:14:11.51:173,12,0	1/1:16,4:20:21.07:416,21,0	1/1:16,3:20:10.81:361,11,0	1/1:26,2:29:23.79:408,24,0	0/1:27,3:30:1.95:534,0,2	0/1:23,0:30:13.89:30,0,14	0/1:13,0:14:4.23:4,0,18	0/0:14,0:18:1.91:0,2,112	1/1:25,0:25:29.45:380,29,0	1/1:19,1:20:11.35:126,11,0	1/1:21,2:23:17.41:260,17,0	1/1:11,1:11:8.76:125,9,0	1/1:24,0:23:9.02:132,9,0	1/1:13,2:16:24.06:455,24,0	0/1:10,0:9:5.94:79,0,6
chr10	13486412	.	GT	G	9896.51	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=3.512;DP=506;FS=0.945;HRun=5;HaplotypeScore=82.4680;InbreedingCoeff=0.9878;MQ=77.66;MQ0=3;MQRankSum=-3.328;QD=25.64;ReadPosRankSum=5.307;VQSLOD=4.2923;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,20:21:50.35:577,50,0	1/1:1,4:5:11.98:136,12,0	0/0:29,0:22:60.20:0,60,798	0/0:32,0:25:69.69:0,70,910	1/1:1,20:21:41.86:476,42,0	1/1:0,12:12:33.09:374,33,0	1/1:1,14:14:25.49:303,25,0	1/1:3,15:17:42.07:445,42,0	1/1:0,19:19:39.11:442,39,0	1/1:0,14:13:39.11:442,39,0	1/1:4,10:14:27.07:305,27,0	1/1:0,12:12:30.08:340,30,0	1/1:0,15:15:45.13:510,45,0	1/1:3,16:19:39.11:442,39,0	1/1:2,19:21:50.88:568,51,0	1/1:2,24:25:56.99:646,57,0	1/1:2,25:27:61.72:684,62,0	1/1:5,17:22:51.10:564,51,0	0/0:22,0:22:58.39:0,58,761	0/0:18,0:18:54.18:0,54,738	0/0:19,0:19:42.14:0,42,563	1/1:2,15:17:32.09:372,32,0	1/1:1,14:15:32.30:372,32,0	1/1:1,16:17:27.07:306,27,0	1/1:2,12:13:30.08:340,30,0	1/1:0,18:18:54.14:603,54,0	1/1:1,18:19:42.12:476,42,0	1/1:0,5:5:15.04:170,15,0
chr10	13489513	.	ACTCTCTCTCTCTCTCTCTCTCT	A	4274.15	PASS	AB=0.923;AC=20;AF=0.435;AN=46;BaseQRankSum=5.712;DP=660;FS=5.057;HRun=0;HaplotypeScore=286.9446;InbreedingCoeff=0.7511;MQ=67.99;MQ0=34;MQRankSum=-2.297;QD=16.13;ReadPosRankSum=0.773;VQSLOD=2.9749;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:29:31.64:0,32,2278	0/1:9,2:10:0:0,0,0	0/0:54,0:24:9.03:0,9,344	0/1:70,0:29:5.51:6,0,265	./.	0/0:18,0:15:21.05:0,21,1291	0/0:15,0:14:18.03:0,18,619	1/1:25,0:24:8.98:77,9,0	1/1:6,6:13:9.03:509,9,0	1/1:12,6:18:15.32:869,15,0	./.	0/0:26,0:25:33.07:0,33,1451	0/0:34,0:33:42.13:0,42,1982	0/0:26,0:25:24.55:0,25,1883	./.	./.	1/1:22,10:30:2.53:172,3,0	1/1:16,1:20:15.04:794,15,0	0/0:18,0:18:26.94:0,27,758	0/0:24,0:25:17.73:0,18,535	0/0:19,0:26:12.03:0,12,423	0/0:35,0:35:27.08:0,27,1337	./.	1/1:13,0:22:3.01:98,3,0	0/0:13,0:13:12.01:0,12,446	1/1:14,7:21:24.08:990,24,0	1/1:18,5:23:12.04:638,12,0	1/1:8,0:8:3.01:121,3,0
chr10	13489560	.	CTGTGTG	C	990.52	PASS	AB=0.809;AC=9;AF=0.173;AN=52;BaseQRankSum=-3.602;DP=583;FS=28.752;HRun=0;HaplotypeScore=153.8878;InbreedingCoeff=0.7608;MQ=42.64;MQ0=40;MQRankSum=4.610;QD=7.68;ReadPosRankSum=2.189;VQSLOD=0.9622;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:41,0:39:24.08:450,24,0	0/0:9,0:7:12.02:0,12,213	./.	./.	0/0:16,0:15:6.02:0,6,123	0/0:24,0:18:23.96:0,24,302	0/0:18,0:16:13.46:0,13,281	0/0:26,0:25:32.69:0,33,368	0/0:21,0:21:18.03:0,18,421	0/0:26,0:26:38.79:0,39,590	0/0:18,0:18:8.70:0,9,215	1/1:16,0:14:12:151,12,0	0/1:7,11:17:0.20:0,0,0	0/1:19,0:18:1.93:224,0,2	0/0:29,0:28:36.12:0,36,858	0/0:23,0:22:42.08:0,42,1003	0/0:29,0:27:31.92:0,32,536	0/0:14,0:14:19.44:0,19,217	0/0:20,0:18:30.06:0,30,598	0/0:19,0:18:14.93:0,15,301	0/0:49,0:43:33.58:0,34,786	0/1:16,5:21:0.03:0,0,0	0/0:15,0:13:18.06:0,18,429	0/0:34,0:32:21.04:0,21,493	1/1:13,0:11:15.05:304,15,0	0/0:31,0:27:49.96:0,50,796	0/0:18,0:16:30.35:0,30,559	0/0:12,0:10:30.07:0,30,597
chr10	13490373	.	T	TG	1156.92	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=-1.897;DP=682;FS=5.101;HRun=6;HaplotypeScore=76.0064;InbreedingCoeff=0.8159;MQ=63.48;MQ0=1;MQRankSum=0.030;QD=18.66;ReadPosRankSum=0.083;VQSLOD=3.2620;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:60,0:60:99:0,162,1619	0/0:12,0:12:36.07:0,36,360	0/0:15,0:8:20.99:0,21,194	0/1:16,0:15:5.63:6,0,206	0/0:25,0:25:60.12:0,60,605	1/1:0,17:17:36.12:450,36,0	1/1:3,26:29:66.21:826,66,0	0/0:26,0:26:53.58:0,54,491	0/0:22,0:22:63.12:0,63,633	0/0:22,0:22:48.07:0,48,472	0/0:21,0:21:60.11:0,60,599	0/0:33,0:33:87.19:0,87,886	0/0:26,0:26:66.14:0,66,667	0/0:22,0:22:60.13:0,60,611	0/0:35,0:35:99:0,102,1025	0/0:34,0:34:87.12:0,87,855	0/0:23,0:23:66.11:0,66,658	0/0:27,0:27:75.13:0,75,753	0/0:21,0:21:57.11:0,57,572	0/0:25,0:25:60.10:0,60,601	0/0:38,0:38:96.07:0,96,946	0/0:25,0:25:56.13:0,56,600	0/0:19,0:19:48.04:0,48,468	0/0:17,0:17:51.12:0,51,519	0/0:19,0:19:42.04:0,42,407	0/0:16,0:16:42.08:0,42,420	0/0:30,0:30:81.15:0,81,812	0/0:7,0:7:18.04:0,18,183
chr10	13491215	.	T	TA	4566.26	PASS	AB=0.746;AC=38;AF=0.679;AN=56;BaseQRankSum=-6.902;DP=614;FS=1.013;HRun=12;HaplotypeScore=79.7309;InbreedingCoeff=0.5565;MQ=71.92;MQ0=5;MQRankSum=1.430;QD=9.21;ReadPosRankSum=-1.037;VQSLOD=3.9652;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:50.04:0,50,356	1/1:1,7:8:14.98:136,15,0	0/1:21,0:14:17.45:17,0,53	0/0:16,0:13:17.99:0,18,116	0/1:11,13:23:16.87:158,0,17	1/1:7,14:21:24.04:234,24,0	0/1:1,18:19:0.88:154,0,1	1/1:12,15:28:6.76:230,7,0	1/1:1,21:22:26.94:263,27,0	0/1:17,11:28:3.89:122,0,4	1/1:4,14:18:17.98:165,18,0	0/1:24,0:25:10.62:11,0,187	0/0:18,0:19:33.90:0,34,244	0/0:14,0:15:28.79:0,29,201	1/1:6,23:29:28.82:266,29,0	1/1:9,26:35:14.58:291,15,0	1/1:2,22:25:17.19:198,17,0	1/1:2,15:17:27.04:262,27,0	1/1:10,13:22:38.81:340,39,0	1/1:6,18:24:10.86:212,11,0	1/1:3,21:25:44.24:461,44,0	0/0:22,1:24:34.65:0,35,243	1/1:5,8:12:12.01:113,12,0	1/1:11,23:34:20.16:358,20,0	0/0:16,0:16:29.72:0,30,219	1/1:5,17:23:38.78:328,39,0	0/1:8,17:25:3.41:129,0,3	1/1:2,7:9:12.02:117,12,0
chr10	13491380	.	C	CT	1374.56	PASS	AB=0.846;AC=12;AF=0.214;AN=56;BaseQRankSum=10.240;DP=650;FS=114.227;HRun=1;HaplotypeScore=223.9087;InbreedingCoeff=-0.2754;MQ=54.81;MQ0=5;MQRankSum=-9.477;QD=4.20;ReadPosRankSum=-3.484;VQSLOD=0.3568;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:20.05:0,20,346	0/0:3,0:3:8.95:0,9,83	0/0:37,2:24:21.81:0,22,553	0/0:41,0:31:32.68:0,33,632	0/1:21,0:19:64.44:64,0,111	0/0:25,0:25:52.76:0,53,674	0/0:27,0:27:61.11:0,61,805	0/1:24,12:34:99:307,0,673	0/1:23,9:33:99:183,0,325	0/1:29,6:35:99:341,0,548	0/0:10,0:10:3.36:0,3,102	0/0:19,0:19:43.83:0,44,594	0/0:16,0:16:48.12:0,48,647	0/0:21,0:21:56.14:0,56,732	0/1:26,12:39:0.14:0,0,394	0/1:27,12:39:75.77:76,0,372	0/1:12,4:16:19.30:19,0,270	0/1:8,0:8:35.74:36,0,93	0/0:22,0:22:60.19:0,60,810	0/0:21,0:21:54.18:0,54,740	0/0:33,0:33:96.31:0,96,1325	0/0:7,0:6:8.86:0,9,98	0/1:20,0:20:55.97:56,0,143	0/1:24,8:33:18.62:19,0,294	0/0:14,0:14:19.50:0,19,253	0/1:24,6:27:99:302,0,481	0/1:14,2:16:99:117,0,275	0/0:5,0:5:14.08:0,14,172
chr10	13491391	.	T	TCTCTCTCTCTC	7602.22	PASS	AB=0.969;AC=24;AF=0.444;AN=54;BaseQRankSum=9.677;DP=700;FS=14.026;HRun=0;HaplotypeScore=375.9254;InbreedingCoeff=-0.4564;MQ=52.99;MQ0=6;MQRankSum=-5.374;QD=14.21;ReadPosRankSum=-3.553;VQSLOD=1.8266;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:21,0:21:99:102,0,694	./.	0/0:36,0:23:17.76:0,18,764	0/0:47,0:28:42.42:0,42,988	0/1:19,0:20:28.20:101,0,28	0/1:21,0:21:99:267,0,720	0/1:26,0:26:99:291,0,716	0/1:49,0:46:99:479,0,360	0/1:31,2:36:15.54:631,0,16	0/1:32,1:34:99:736,0,549	0/1:12,0:12:2.89:3,0,47	0/1:20,0:20:99:312,0,680	0/1:15,0:15:99:369,0,443	0/1:20,0:20:99:512,0,588	0/1:43,4:48:49.97:712,0,50	0/1:40,2:44:98.53:1011,0,99	0/1:18,0:18:3.75:151,0,4	0/1:9,0:10:71.76:191,0,72	0/0:26,0:26:77.91:0,78,2070	0/0:20,0:20:60.20:0,60,1815	0/0:34,0:34:99:0,99,3104	0/1:8,0:7:97.35:97,0,168	0/1:19,1:20:19.49:19,0,67	1/1:31,0:31:15.78:358,16,0	0/1:16,0:16:99:303,0,440	0/1:37,0:33:99:459,0,342	0/1:22,0:21:63.31:248,0,63	1/1:4,1:5:13.81:251,14,0
chr10	13491397	.	T	TTCTCTCTC	14187.43	PASS	AB=0.922;AC=39;AF=0.722;AN=54;BaseQRankSum=6.371;DP=741;FS=0.441;HRun=0;HaplotypeScore=338.2929;InbreedingCoeff=0.4837;MQ=53.98;MQ0=6;MQRankSum=-8.640;QD=23.80;ReadPosRankSum=-3.250;VQSLOD=3.2034;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:18,2:22:24.96:542,0,25	./.	0/1:38,0:25:7.65:8,0,641	0/0:46,0:29:14.48:0,14,534	1/1:23,0:21:6.50:169,7,0	1/1:14,1:26:36.55:979,37,0	1/1:22,1:30:63.19:1493,63,0	1/1:52,3:51:58.49:1018,58,0	1/1:32,4:36:49.98:1092,50,0	0/1:36,1:37:99:583,0,157	0/0:11,0:11:2.90:0,3,48	1/1:17,1:22:30.06:738,30,0	1/1:8,1:15:27.02:811,27,0	1/1:17,0:23:41.97:862,42,0	1/1:36,5:42:35.69:838,36,0	1/1:40,6:47:24.70:1296,25,0	1/1:15,2:17:22.79:526,23,0	0/1:10,2:12:8.44:489,0,8	0/0:25,0:25:59.56:0,60,1431	0/0:18,0:20:51.17:0,51,1190	0/0:38,0:39:93.29:0,93,2171	1/1:7,0:7:9.03:179,9,0	1/1:21,0:21:8.92:64,9,0	1/1:34,3:37:28.52:455,29,0	1/1:8,0:16:27.09:761,27,0	0/1:38,2:37:48.92:735,0,49	1/1:24,0:23:35.34:389,35,0	1/1:4,0:4:8.98:161,9,0
chr10	13491401	.	C	CTCTA	3525.19	PASS	AB=0.975;AC=25;AF=0.463;AN=54;BaseQRankSum=11.761;DP=749;FS=39.862;HRun=0;HaplotypeScore=328.8130;InbreedingCoeff=-0.4303;MQ=57.73;MQ0=5;MQRankSum=-9.222;QD=6.17;ReadPosRankSum=4.463;VQSLOD=1.2960;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:22:79.44:79,0,116	./.	0/0:40,0:27:32.41:0,32,660	0/0:50,0:34:35.28:0,35,548	0/1:23,2:23:35.44:69,0,35	0/1:27,0:27:39.37:242,0,39	1/1:30,0:30:13.38:326,13,0	0/1:56,0:52:4.62:5,0,515	0/1:36,0:36:49.25:206,0,49	0/1:30,4:34:99:369,0,361	1/1:7,1:8:2.60:10,3,0	0/1:20,0:20:45.88:133,0,46	0/1:14,0:14:17.56:218,0,18	0/1:22,0:22:92.38:158,0,92	0/1:46,0:46:20.32:183,0,20	0/1:48,1:49:23.04:363,0,23	0/1:15,0:15:55.34:56,0,55	0/1:12,0:12:69.07:69,0,107	0/0:24,0:24:66.06:0,66,1151	0/0:20,0:20:57.16:0,57,959	0/0:39,0:39:99:0,111,1849	0/1:8,0:7:5.01:5,0,20	0/1:17,3:20:49.82:78,0,50	0/1:38,0:38:66.69:67,0,106	1/1:17,0:17:5.90:164,6,0	0/1:38,4:39:99:431,0,305	0/1:24,1:25:99:270,0,150	0/1:4,0:4:24.60:25,0,32
chr10	13491430	.	GTGTCTC	G	1222.61	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=7.919;DP=722;FS=2.003;HRun=0;HaplotypeScore=324.0880;InbreedingCoeff=0.9524;MQ=56.92;MQ0=3;MQRankSum=-8.382;QD=15.09;ReadPosRankSum=-0.599;VQSLOD=2.1787;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:17:23.95:240,24,0	0/0:6,0:6:18.06:0,18,567	0/0:33,0:22:45.15:0,45,1033	0/0:46,0:31:19.13:0,19,942	0/0:26,0:26:35.77:0,36,1021	0/0:21,0:21:45.12:0,45,1175	0/0:28,0:28:64.31:0,64,1797	0/0:50,0:49:99:0,117,3081	0/0:30,0:30:69.23:0,69,2008	0/0:34,0:34:87.76:0,88,2122	0/0:9,0:9:15.05:0,15,343	1/1:9,6:15:24.02:264,24,0	1/1:11,0:11:21.06:269,21,0	1/1:18,0:18:35.83:394,36,0	0/0:46,0:46:87.07:0,87,2527	0/0:39,0:39:92.60:0,93,2839	0/0:19,0:19:47.81:0,48,1290	0/0:13,0:13:25.74:0,26,648	0/0:27,0:26:65.96:0,66,1785	0/0:20,0:20:48.16:0,48,1325	0/0:37,0:37:99:0,102,3285	1/1:4,2:6:3.01:33,3,0	0/0:21,0:21:44.81:0,45,1058	0/0:45,0:45:78.77:0,79,2326	1/1:10,4:14:18.05:202,18,0	0/0:51,0:51:99:0,138,3754	0/0:31,0:31:84.21:0,84,2367	0/0:7,0:7:18.06:0,18,582
chr10	13491440	.	C	CCA	1808.13	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=8.030;DP=723;FS=3.887;HRun=0;HaplotypeScore=278.4170;InbreedingCoeff=0.9494;MQ=55.40;MQ0=2;MQRankSum=-8.307;QD=24.43;ReadPosRankSum=-0.438;VQSLOD=3.6669;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,10:16:26.17:330,26,0	0/0:8,0:8:18.06:0,18,293	0/0:34,0:21:55.37:0,55,806	0/0:52,0:35:54.75:0,55,891	0/0:24,0:24:35.87:0,36,502	0/0:23,0:23:47.33:0,47,670	0/0:25,1:26:58.56:0,59,956	0/0:45,0:43:99:0,126,1997	0/0:28,0:28:69.23:0,69,1100	0/0:36,0:35:99:0,99,1468	0/0:11,0:11:15.01:0,15,183	1/1:7,7:15:26.41:375,26,0	1/1:2,7:9:23.98:346,24,0	1/1:2,13:15:36.11:563,36,0	0/0:44,1:45:78.39:0,78,1322	0/0:40,0:40:88.27:0,88,1473	0/0:22,1:23:35.19:0,35,692	0/0:11,0:11:11.82:0,12,333	0/0:23,0:22:66.23:0,66,1067	0/0:21,0:21:54.17:0,54,851	0/0:41,0:41:99:0,114,1832	1/1:3,3:6:3.01:50,3,0	0/0:21,0:21:47.69:0,48,675	0/0:48,0:48:77.05:0,77,1241	1/1:4,9:13:23.54:325,24,0	0/0:53,0:53:99:0,143,2204	0/0:29,0:29:68.94:0,69,1145	0/0:7,0:7:18.06:0,18,279
chr10	13491444	.	GTCCA	G	1955.32	PASS	AB=0.980;AC=16;AF=0.286;AN=56;BaseQRankSum=8.397;DP=721;FS=1.503;HRun=0;HaplotypeScore=278.6448;InbreedingCoeff=0.5926;MQ=54.72;MQ0=3;MQRankSum=-5.507;QD=11.85;ReadPosRankSum=-1.704;VQSLOD=2.8605;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:12,8:20:12.26:377,12,0	0/0:9,0:9:26.12:0,26,531	0/0:32,0:18:41.91:0,42,903	0/0:53,0:34:26.18:0,26,1193	0/0:22,0:22:6.37:0,6,735	0/1:23,0:23:4.91:5,0,534	0/0:23,1:24:29.41:0,29,987	0/0:48,0:46:51.75:0,52,2629	0/0:26,0:26:44.18:0,44,1293	0/0:36,0:35:72.77:0,73,1839	0/0:12,0:12:14.97:0,15,228	1/1:7,8:15:24.07:359,24,0	1/1:2,8:10:26.90:373,27,0	1/1:4,13:17:35.18:573,35,0	0/0:42,1:43:15.66:0,16,1577	0/0:39,0:39:41.87:0,42,1805	0/1:21,2:23:7.39:7,0,914	0/1:11,0:11:44.01:44,0,357	0/0:22,0:21:63.18:0,63,1326	0/0:19,0:19:45.14:0,45,1036	0/0:42,0:42:99:0,120,2999	1/1:3,3:6:3.01:47,3,0	0/0:20,0:20:41.73:0,42,883	0/0:47,0:47:46.92:0,47,1409	1/1:4,9:13:23.80:316,24,0	0/0:53,0:52:2.42:0,2,2696	0/1:27,0:27:38.32:38,0,1455	0/0:8,0:8:21.07:0,21,397
chr10	13491446	.	CCA	C	1382.21	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=8.515;DP=714;FS=4.689;HRun=0;HaplotypeScore=256.3637;InbreedingCoeff=0.9379;MQ=55.83;MQ0=3;MQRankSum=-7.436;QD=16.65;ReadPosRankSum=-1.852;VQSLOD=2.9690;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:20:11.24:220,11,0	0/0:9,0:9:26.12:0,26,394	0/0:31,1:18:44.70:0,45,800	0/0:53,2:34:47.26:0,47,1128	0/0:21,0:21:34.26:0,34,586	0/0:22,0:22:37.68:0,38,450	0/0:24,0:24:48.25:0,48,860	0/0:46,0:44:99:0,125,2464	0/0:26,0:26:63:0,63,1092	0/0:32,0:31:86.22:0,86,1564	0/0:10,1:11:15.05:0,15,226	1/1:16,0:16:27.05:317,27,0	1/1:10,0:10:9.66:271,10,0	1/1:17,0:17:34.97:469,35,0	0/0:43,1:44:72.91:0,73,1231	0/0:39,0:39:79.33:0,79,1507	0/0:22,0:23:27.01:0,27,773	0/0:10,0:10:19.80:0,20,324	0/0:22,0:21:63.18:0,63,1163	0/0:18,0:18:45.14:0,45,855	0/0:43,0:43:99:0,123,2456	1/1:6,0:6:3.01:37,3,0	0/0:22,0:22:41.73:0,42,743	0/0:47,0:47:69.54:0,70,1106	1/1:14,0:14:19.16:243,19,0	0/0:50,0:49:99:0,118,2209	0/0:27,0:27:52.85:0,53,1161	0/0:8,0:8:21.07:0,21,308
chr10	13491448	.	A	ATCTG	12228.12	PASS	AB=0.744;AC=31;AF=0.554;AN=56;BaseQRankSum=-3.392;DP=739;FS=2.958;HRun=0;HaplotypeScore=258.0794;InbreedingCoeff=-0.1061;MQ=56.85;MQ0=3;MQRankSum=-7.686;QD=21.57;ReadPosRankSum=0.410;VQSLOD=4.4269;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:20,3:23:27.09:493,27,0	0/1:4,5:9:99:274,0,179	0/0:34,0:19:32:0,32,356	0/0:56,0:36:32.72:0,33,625	0/1:16,5:21:99:223,0,338	1/1:13,11:24:37.80:939,38,0	1/1:18,8:26:46.12:834,46,0	0/1:42,2:43:99:204,0,835	0/1:19,6:25:99:335,0,563	0/1:28,7:34:99:496,0,840	0/1:6,6:13:38.90:212,0,39	1/1:16,1:17:24.97:433,25,0	1/1:11,0:11:24.08:405,24,0	1/1:15,2:17:39.09:590,39,0	0/1:29,16:45:99:882,0,540	0/1:21,20:41:99:1243,0,527	0/1:15,9:24:99:731,0,297	0/1:4,6:10:74.64:459,0,75	0/0:20,0:19:32.96:0,33,478	0/0:17,0:17:36.10:0,36,549	0/0:44,0:44:99:0,99,1543	1/1:7,1:8:3.01:71,3,0	0/1:21,4:25:99:262,0,346	0/1:28,20:48:99:673,0,484	1/1:14,0:14:27.09:559,27,0	0/1:41,11:51:99:784,0,1187	0/1:17,10:27:99:774,0,538	0/1:2,6:8:69.37:353,0,69
chr10	13491510	.	G	GTC	2541.29	PASS	AB=0.788;AC=14;AF=0.250;AN=56;BaseQRankSum=-0.410;DP=673;FS=11.144;HRun=0;HaplotypeScore=210.1497;InbreedingCoeff=0.3755;MQ=53.68;MQ0=6;MQRankSum=3.045;QD=12.28;ReadPosRankSum=-0.854;VQSLOD=2.3609;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:21,16:38:22.47:682,0,22	0/0:8,0:8:6.02:0,6,72	0/1:35,1:19:15.97:16,0,48	0/0:57,0:19:6.02:0,6,65	0/0:14,0:14:5.01:0,5,63	1/1:14,0:17:13.86:108,14,0	1/1:22,0:26:33.65:300,34,0	0/0:35,0:33:39.14:0,39,526	0/0:19,0:21:36.81:0,37,317	0/0:30,0:32:41.42:0,41,414	0/0:20,0:20:5.76:0,6,73	1/1:3,10:14:12.41:368,12,0	0/1:7,4:11:46.76:215,0,47	0/1:10,7:17:11.96:288,0,12	0/0:33,0:34:20.40:0,20,356	0/0:32,0:32:21.15:0,21,402	0/0:24,0:24:32.77:0,33,376	0/0:18,0:18:19.44:0,19,361	0/1:17,0:17:2.69:3,0,194	0/0:19,0:19:30.08:0,30,348	0/0:32,0:32:51.02:0,51,609	1/1:10,4:14:27.56:421,28,0	0/0:20,0:21:9.74:0,10,245	0/0:36,0:37:32.45:0,32,351	0/1:6,11:17:11.87:311,0,12	0/0:29,0:29:35.34:0,35,375	0/0:23,0:25:13.68:0,14,332	0/0:5,0:5:5.64:0,6,27
chr10	13491573	.	GC	G	3428.35	PASS	AB=0.783;AC=41;AF=0.732;AN=56;BaseQRankSum=-2.863;DP=385;FS=3.602;HRun=10;HaplotypeScore=102.3927;InbreedingCoeff=0.5620;MQ=68.47;MQ0=2;MQRankSum=-1.505;QD=10.23;ReadPosRankSum=3.662;VQSLOD=2.9781;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:11.97:0,12,117	1/1:0,1:1:3:26,3,0	0/0:15,0:11:13.19:0,13,74	0/1:18,0:15:9.01:9,0,62	1/1:4,6:10:8.07:77,8,0	1/1:4,0:13:14.22:41,14,0	1/1:9,0:20:20.72:62,21,0	1/1:18,6:24:0.57:90,1,0	1/1:1,13:14:23.97:206,24,0	1/1:16,11:26:11.44:312,11,0	1/1:9,8:17:11.72:104,12,0	0/0:3,0:3:6.45:0,6,53	0/0:7,0:7:9.01:0,9,91	0/0:3,0:4:5.97:0,6,50	1/1:3,11:14:26.99:234,27,0	0/1:7,8:14:18.78:109,0,19	0/1:5,7:15:55.06:123,0,55	1/1:6,5:13:14.58:114,15,0	1/1:5,8:13:26.96:227,27,0	1/1:3,10:13:26.98:234,27,0	1/1:4,19:24:53.98:468,54,0	1/1:0,8:8:21:182,21,0	1/1:5,5:10:8.98:78,9,0	1/1:11,7:19:17.23:152,17,0	0/0:8,0:8:9.02:0,9,100	1/1:9,14:22:27.86:320,28,0	1/1:8,4:13:11.98:104,12,0	1/1:2,6:8:17.98:156,18,0
chr10	13491621	.	C	CTCTG	1496.45	PASS	AB=0.816;AC=15;AF=0.268;AN=56;BaseQRankSum=-2.992;DP=327;FS=3.707;HRun=0;HaplotypeScore=125.7488;InbreedingCoeff=-0.1042;MQ=78.82;MQ0=0;MQRankSum=-3.536;QD=9.72;ReadPosRankSum=-0.258;VQSLOD=2.6089;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:21:44.92:0,45,835	0/0:2,0:2:6.02:0,6,96	0/0:19,0:20:7.51:0,8,218	0/0:23,0:18:11.63:0,12,103	1/1:9,2:11:0.94:1,1,0	0/0:11,0:11:24.08:0,24,391	0/1:14,0:14:0.02:0,0,363	0/1:26,0:26:83.02:83,0,274	0/1:5,1:6:66.88:67,0,94	0/1:12,2:14:99:163,0,253	0/1:5,4:9:60.49:60,0,166	0/0:5,0:5:5.93:0,6,48	0/0:8,0:8:17.96:0,18,224	0/0:5,0:5:11.94:0,12,130	0/1:8,5:13:99:208,0,127	0/1:6,3:9:91.99:140,0,92	0/0:13,0:13:15.05:0,15,249	0/1:6,5:11:55.05:255,0,55	0/0:14,0:14:27.08:0,27,443	0/0:7,0:7:12.03:0,12,177	0/0:21,0:21:47.12:0,47,670	0/0:9,0:9:21.04:0,21,296	0/1:7,3:10:99:136,0,115	0/1:5,3:8:48.69:67,0,49	0/0:9,0:9:6.02:0,6,78	0/1:15,2:17:92.95:93,0,127	1/1:1,4:6:15.05:375,15,0	0/0:4,0:4:9.03:0,9,156
chr10	13491637	.	G	GCCT	2258.58	PASS	AB=0.917;AC=33;AF=0.611;AN=54;BaseQRankSum=-1.811;DP=270;FS=2.321;HRun=0;HaplotypeScore=106.0546;InbreedingCoeff=0.2224;MQ=68.17;MQ0=0;MQRankSum=-1.948;QD=11.35;ReadPosRankSum=-3.712;VQSLOD=2.6431;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:21,3:23:8.95:312,9,0	1/1:2,0:2:2.84:14,3,0	0/1:14,0:11:1.25:1,0,161	0/0:17,0:13:11.16:0,11,86	./.	1/1:11,0:11:17.76:119,18,0	1/1:8,2:13:23.91:285,24,0	0/1:15,0:20:14.96:215,0,15	0/1:7,0:7:8.08:28,0,8	0/1:8,0:8:28.15:46,0,28	0/0:8,0:8:4.14:0,4,47	1/1:1,3:4:6.02:129,6,0	1/1:5,3:8:14.20:181,14,0	1/1:4,2:6:11.93:167,12,0	1/1:11,0:11:16.38:92,16,0	0/1:7,0:9:19.61:56,0,20	0/1:7,0:7:27.93:28,0,32	0/1:3,0:7:7.79:111,0,8	0/0:12,0:12:30.07:0,30,415	0/0:7,0:7:3:0,3,27	0/0:17,0:17:36.04:0,36,522	1/1:5,1:7:18:191,18,0	0/1:6,0:6:13.25:13,0,37	1/1:2,1:5:5.25:82,5,0	1/1:1,10:13:9.03:153,9,0	0/1:9,0:9:4.83:58,0,5	1/1:5,0:8:17.59:153,18,0	0/0:3,0:3:5.55:0,6,29
chr10	13491649	.	TTTTC	T	125.41	PASS	AB=0.953;AC=10;AF=0.185;AN=54;BaseQRankSum=4.263;DP=241;FS=9.488;HRun=0;HaplotypeScore=99.8508;InbreedingCoeff=0.1640;MQ=64.71;MQ0=0;MQRankSum=-3.931;QD=2.37;ReadPosRankSum=4.046;VQSLOD=0.5602;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:14:36.12:0,36,909	0/0:2,0:2:3.01:0,3,68	0/0:15,0:10:12.04:0,12,221	0/0:23,0:17:26.39:0,26,386	./.	0/0:7,0:7:18.06:0,18,452	0/0:12,0:12:36.08:0,36,936	0/0:15,0:15:29.08:0,29,579	0/1:7,1:8:52.78:53,0,291	0/1:7,0:7:9.72:10,0,278	0/1:6,0:6:25.94:26,0,122	0/0:7,0:7:18:0,18,362	0/0:7,0:7:18.06:0,18,473	0/0:7,0:7:18.02:0,18,391	0/0:8,0:8:23.97:0,24,528	0/1:12,1:13:21.05:21,0,570	1/1:3,1:4:11.87:80,12,0	0/0:7,0:7:4.71:0,5,155	0/0:11,0:11:33.04:0,33,636	0/0:4,0:4:12.04:0,12,333	0/0:16,0:16:35.75:0,36,793	0/0:7,0:7:15.05:0,15,335	1/1:3,0:3:5.91:38,6,0	0/0:5,0:5:8.90:0,9,186	0/0:7,0:7:12:0,12,271	0/1:8,1:9:24.89:25,0,431	0/0:11,0:11:33.11:0,33,862	0/1:3,0:3:17.03:17,0,76
chr10	13491650	.	T	TCCCTG	924.89	PASS	AB=0.956;AC=11;AF=0.204;AN=54;BaseQRankSum=0.821;DP=236;FS=15.237;HRun=0;HaplotypeScore=111.3219;InbreedingCoeff=0.1299;MQ=60.85;MQ0=0;MQRankSum=-2.788;QD=15.41;ReadPosRankSum=3.258;VQSLOD=1.9833;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:14:30.10:0,30,630	0/0:1,0:1:2.98:0,3,21	0/0:13,0:8:11.92:0,12,207	0/0:23,0:17:13.11:0,13,401	./.	0/0:7,0:7:15.05:0,15,314	0/0:12,0:12:36.12:0,36,764	0/0:14,0:14:29.22:0,29,563	0/1:7,1:8:93.86:94,0,190	0/1:8,0:8:99:107,0,175	0/1:5,0:5:27.96:135,0,28	0/0:7,0:7:17.94:0,18,274	0/0:7,0:7:18.03:0,18,310	0/0:7,0:7:17.94:0,18,227	0/0:8,0:8:23.86:0,24,275	0/1:12,1:13:99:154,0,368	1/1:2,2:4:12.04:250,12,0	0/1:6,1:7:30.77:31,0,92	0/0:11,0:11:33.08:0,33,629	0/0:4,0:4:12.04:0,12,250	0/0:16,0:16:32.62:0,33,682	0/0:7,0:7:12:0,12,196	1/1:1,2:3:9.03:186,9,0	0/0:5,0:5:8.73:0,9,159	0/0:7,0:7:12:0,12,230	0/1:9,0:9:11.65:12,0,281	0/0:11,0:11:33.11:0,33,650	0/1:3,0:3:55.30:108,0,55
chr10	13491727	.	C	CTA	10045.75	PASS	AB=0.654;AC=43;AF=0.768;AN=56;BaseQRankSum=5.900;DP=473;FS=11.586;HRun=0;HaplotypeScore=223.0903;InbreedingCoeff=0.6098;MQ=78.78;MQ0=3;MQRankSum=-9.282;QD=31.69;ReadPosRankSum=1.763;VQSLOD=4.6218;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,10:18:30.06:504,30,0	0/1:3,4:7:23.88:208,0,24	0/0:28,0:18:15.47:0,15,322	0/0:65,0:48:55.92:0,56,729	0/1:5,8:11:16.64:46,0,17	1/1:1,9:9:15.05:284,15,0	1/1:7,5:12:11.79:296,12,0	1/1:11,8:18:18.04:490,18,0	1/1:3,8:11:29.96:461,30,0	0/1:14,10:24:14.71:625,0,15	1/1:3,7:10:12.03:223,12,0	1/1:4,10:14:29.97:523,30,0	1/1:3,12:15:36.07:640,36,0	1/1:3,3:6:12.01:190,12,0	1/1:5,16:21:48.16:880,48,0	1/1:9,17:26:57.04:970,57,0	1/1:4,4:8:3.68:171,4,0	1/1:3,5:8:15.01:229,15,0	0/0:18,0:18:51.15:0,51,720	0/0:14,0:14:42.11:0,42,575	0/0:29,0:29:66.54:0,67,887	1/1:6,13:19:36.12:669,36,0	1/1:3,7:10:18.04:325,18,0	1/1:6,5:11:5.73:164,6,0	1/1:2,6:8:18.06:336,18,0	1/1:11,9:20:26.37:649,26,0	1/1:8,18:26:66.07:1104,66,0	1/1:1,0:1:3.01:57,3,0
chr10	13491749	.	T	TTC	9211.95	PASS	AC=40;AF=0.741;AN=54;BaseQRankSum=6.307;DP=499;FS=3.821;HRun=0;HaplotypeScore=235.8443;InbreedingCoeff=0.9273;MQ=66.92;MQ0=2;MQRankSum=-12.219;QD=28.26;ReadPosRankSum=-1.254;VQSLOD=4.7882;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,21:22:38.87:657,39,0	1/1:2,7:9:24.08:391,24,0	0/0:27,0:20:15.78:0,16,382	0/0:52,0:39:47.08:0,47,572	1/1:3,15:16:2.79:195,3,0	0/0:15,0:14:21.07:0,21,273	0/0:14,0:14:20.93:0,21,273	1/1:6,11:17:18.06:310,18,0	1/1:3,14:17:39.13:673,39,0	1/1:7,20:27:65.91:1095,66,0	1/1:6,7:13:21.05:327,21,0	1/1:4,8:12:17.80:267,18,0	1/1:5,12:17:36.12:575,36,0	1/1:4,7:11:21.07:334,21,0	1/1:6,18:24:39.13:614,39,0	1/1:2,19:21:47.70:814,48,0	1/1:0,7:7:18.06:293,18,0	1/1:1,7:8:15.05:243,15,0	0/0:19,0:18:48.16:0,48,621	0/0:19,0:19:33.11:0,33,428	0/0:26,0:26:66.15:0,66,822	1/1:2,16:19:33.11:469,33,0	1/1:2,13:15:14.79:226,15,0	1/1:6,4:10:6.01:73,6,0	1/1:3,5:8:11.95:158,12,0	1/1:9,12:21:42.01:685,42,0	1/1:8,22:30:53.90:812,54,0	./.
chr10	13491794	.	C	CTCTGTGTG	11719.91	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=0.767;DP=648;FS=20.748;HRun=0;HaplotypeScore=284.0520;InbreedingCoeff=0.8000;MQ=54.13;MQ0=6;MQRankSum=-7.504;QD=24.21;ReadPosRankSum=-0.479;VQSLOD=3.1020;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:30:20.80:503,21,0	1/1:14,2:16:15:416,15,0	0/0:42,0:26:27.02:0,27,328	0/0:55,0:36:4.85:0,5,159	1/1:23,2:24:6.16:151,6,0	1/1:18,0:18:30.10:817,30,0	1/1:22,0:22:9.03:146,9,0	1/1:37,0:36:44.95:762,45,0	1/1:17,2:19:15:395,15,0	1/1:36,4:40:58.43:1507,58,0	1/1:16,3:19:5.23:98,5,0	1/1:19,0:19:26.16:636,26,0	1/1:19,0:19:36.05:709,36,0	1/1:15,0:15:17.79:461,18,0	1/1:22,4:26:18.06:497,18,0	1/1:20,1:19:9.01:242,9,0	1/1:13,1:14:15.05:457,15,0	1/1:6,9:17:12.04:479,12,0	0/0:16,0:15:24.03:0,24,443	0/0:14,0:14:27.09:0,27,660	0/0:35,0:35:59.69:0,60,1270	1/1:19,0:19:6.89:156,7,0	1/1:18,4:22:4.27:172,4,0	1/1:12,4:16:11.98:461,12,0	1/1:14,0:14:24.08:731,24,0	1/1:24,4:26:50.97:1092,51,0	1/1:21,2:23:29.98:647,30,0	1/1:4,1:5:6.02:185,6,0
chr10	13491820	.	C	CTGTG	4601.03	PASS	AB=0.934;AC=22;AF=0.393;AN=56;BaseQRankSum=8.142;DP=680;FS=24.859;HRun=0;HaplotypeScore=225.0307;InbreedingCoeff=-0.4910;MQ=50.81;MQ0=26;MQRankSum=-8.856;QD=10.34;ReadPosRankSum=5.827;VQSLOD=2.6307;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:25,5:29:16.44:319,0,16	0/1:13,0:13:38.57:151,0,39	0/0:54,0:18:34.49:0,34,539	0/0:74,0:30:35.01:0,35,575	0/1:17,0:17:40.92:41,0,135	1/1:13,4:16:24.08:418,24,0	0/0:23,0:23:5.20:0,5,57	0/1:37,0:35:99:385,0,618	0/1:17,0:17:82.29:128,0,82	0/1:30,0:30:99:341,0,409	0/0:16,0:16:10.86:0,11,145	0/1:15,5:20:50.64:394,0,51	0/1:17,4:21:85.27:331,0,85	0/1:19,4:23:99:296,0,128	0/1:24,1:25:99:122,0,157	0/1:23,0:21:17.23:17,0,348	0/1:16,0:16:26.31:26,0,206	0/1:20,0:20:99:99,0,457	0/0:14,0:12:36.10:0,36,570	0/0:14,0:14:33.11:0,33,600	0/0:37,0:33:81.04:0,81,1343	0/1:12,6:17:12.98:130,0,13	0/1:21,0:20:4.03:4,0,78	0/1:20,1:21:99:114,0,265	0/1:11,8:18:69.19:473,0,69	0/1:25,0:22:78.99:501,0,79	0/1:23,1:24:99:251,0,222	0/1:8,0:8:58.31:58,0,209
chr10	13491826	.	GTC	G	1492.10	PASS	AB=0.920;AC=18;AF=0.321;AN=56;BaseQRankSum=5.629;DP=687;FS=36.602;HRun=0;HaplotypeScore=210.9026;InbreedingCoeff=0.2597;MQ=56.08;MQ0=25;MQRankSum=1.054;QD=5.20;ReadPosRankSum=0.932;VQSLOD=1.3181;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:18,11:28:1.61:216,2,0	0/0:11,0:11:12.04:0,12,186	0/0:61,0:24:9.95:0,10,345	0/0:76,0:29:28.75:0,29,369	0/0:18,0:18:15.05:0,15,237	0/0:16,0:15:9.66:0,10,47	0/0:25,0:25:17.31:0,17,128	0/0:37,2:37:1.03:0,1,663	0/1:15,1:16:18.16:18,0,191	0/0:25,1:26:11.96:0,12,650	0/0:17,0:17:9.02:0,9,145	1/1:9,11:20:1.52:220,2,0	1/1:8,13:21:21.79:226,22,0	1/1:10,12:22:33.43:367,33,0	0/0:27,0:27:10.31:0,10,407	0/0:21,1:20:30.10:0,30,480	0/1:17,1:18:3.20:3,0,361	0/1:21,2:23:21.15:21,0,654	0/0:14,0:13:24.04:0,24,350	0/0:15,0:15:16.34:0,16,543	0/1:31,4:32:42.29:42,0,819	0/1:14,5:18:14.07:177,0,14	0/1:17,1:17:24.14:24,0,130	0/1:20,1:21:7.27:7,0,357	1/1:10,9:18:30.05:337,30,0	0/1:24,1:22:0.14:0,0,402	0/0:21,0:21:16.87:0,17,373	0/0:11,0:11:27.04:0,27,390
chr10	13491828	.	C	CTG	2390.18	PASS	AB=0.912;AC=18;AF=0.321;AN=56;BaseQRankSum=9.201;DP=689;FS=6.335;HRun=0;HaplotypeScore=208.5184;InbreedingCoeff=0.0294;MQ=56.05;MQ0=25;MQRankSum=-4.640;QD=7.13;ReadPosRankSum=0.115;VQSLOD=2.5387;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:24,5:28:26.46:294,26,0	0/1:11,0:11:7.97:8,0,88	0/0:60,0:24:49.48:0,49,599	0/0:79,0:30:31.99:0,32,429	0/0:18,0:18:6.87:0,7,215	1/1:8,4:15:24.02:314,24,0	1/1:2,23:25:13.05:394,13,0	0/1:39,0:37:99:107,0,690	0/1:16,0:16:18.51:19,0,77	0/1:26,0:26:99:116,0,402	0/0:17,0:17:4.91:0,5,130	0/1:15,4:19:7.96:228,0,8	0/1:18,4:22:15.28:185,0,15	0/1:18,4:22:50.86:236,0,51	0/1:25,1:26:2.30:2,0,308	0/0:24,0:22:26.70:0,27,404	0/0:18,0:18:32.24:0,32,357	0/0:24,0:24:5.31:0,5,514	0/0:13,0:12:36.05:0,36,445	0/0:16,0:16:25.33:0,25,595	0/0:34,0:30:21.98:0,22,914	0/1:15,5:19:7.10:141,0,7	0/0:18,0:17:5.59:0,6,132	0/0:20,1:21:12.73:0,13,231	0/1:11,8:18:7.79:293,0,8	0/1:24,0:21:99:142,0,126	0/1:20,1:21:81.46:81,0,277	0/0:11,0:11:5.66:0,6,296
chr10	13492755	.	ATCTTT	A	1260.85	PASS	AB=0.976;AC=17;AF=0.304;AN=56;BaseQRankSum=7.871;DP=469;FS=6.473;HRun=0;HaplotypeScore=107.9901;InbreedingCoeff=-0.1484;MQ=69.32;MQ0=12;MQRankSum=-5.067;QD=4.96;ReadPosRankSum=7.718;VQSLOD=0.3950;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:26:69.56:0,70,1015	0/1:8,0:8:23.38:23,0,34	0/0:28,0:11:31.19:0,31,335	0/0:14,0:9:17.18:0,17,196	0/1:22,0:22:93.53:94,0,205	0/0:15,0:15:45.08:0,45,786	0/0:22,0:22:56.05:0,56,1112	0/1:45,1:45:99:123,0,489	0/1:15,1:16:99:143,0,127	0/1:16,0:15:61.27:61,0,102	1/1:7,0:7:13.43:84,13,0	0/0:12,0:11:29.98:0,30,399	0/0:5,0:5:13.54:0,14,136	0/0:12,0:13:32.94:0,33,417	0/1:11,1:12:51.31:51,0,101	0/1:11,0:11:29.14:97,0,29	0/1:23,0:23:48.45:139,0,48	0/1:13,1:14:96.08:146,0,96	0/0:27,0:27:74.60:0,75,951	0/0:18,0:18:42.33:0,42,643	0/0:9,0:8:20.06:0,20,246	0/0:10,0:9:17.84:0,18,190	0/1:16,0:16:47.52:48,0,183	0/1:13,0:13:41.69:42,0,70	0/0:15,0:15:44.94:0,45,599	0/1:28,1:28:99:228,0,152	0/1:15,1:15:52.46:126,0,52	1/1:5,0:5:2.99:23,3,0
chr10	13494381	.	A	AG	6044.62	PASS	AB=1.000;AC=47;AF=0.839;AN=56;BaseQRankSum=0.160;DP=537;FS=0.000;HRun=11;HaplotypeScore=100.5698;InbreedingCoeff=0.8313;MQ=72.32;MQ0=0;MQRankSum=-1.685;QD=13.08;ReadPosRankSum=4.261;VQSLOD=4.8197;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:29:47.13:323,47,0	1/1:5,0:5:14.56:81,15,0	0/0:13,1:14:17.79:0,18,123	0/1:12,0:13:13.58:14,0,34	1/1:13,0:13:32.24:198,32,0	1/1:11,0:11:5.92:41,6,0	1/1:23,2:28:36.47:270,36,0	1/1:21,1:22:48.07:247,48,0	1/1:16,1:17:41.19:276,41,0	1/1:23,1:24:56.74:314,57,0	1/1:10,2:12:26.46:182,26,0	1/1:21,0:21:47.48:327,47,0	1/1:16,0:16:32.28:206,32,0	1/1:30,0:30:67.91:444,68,0	1/1:23,0:23:49.87:311,50,0	1/1:18,0:18:40.95:244,41,0	1/1:36,2:38:88.41:577,88,0	1/1:28,0:28:73:440,73,0	0/0:15,0:16:22.88:0,23,162	0/0:16,0:18:13:0,13,79	0/0:20,0:27:36.05:0,36,221	1/1:12,0:12:20.82:146,21,0	1/1:7,1:8:17.65:120,18,0	1/1:24,1:25:52.91:338,53,0	1/1:10,0:10:20.73:137,21,0	1/1:24,0:24:48.72:273,49,0	1/1:11,1:12:32.43:219,32,0	1/1:22,0:22:50.09:314,50,0
chr10	13494385	.	G	GC	3083.46	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=-9.258;DP=523;FS=11.658;HRun=0;HaplotypeScore=104.4899;InbreedingCoeff=0.8283;MQ=72.99;MQ0=0;MQRankSum=-1.041;QD=25.07;ReadPosRankSum=3.385;VQSLOD=4.0383;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,19:21:47.73:648,48,0	0/0:5,0:5:11.78:0,12,41	0/0:13,0:13:39.03:0,39,430	0/0:15,0:14:32.19:0,32,254	0/0:13,0:13:28.58:0,29,109	0/0:4,0:4:5.03:0,5,31	0/0:29,0:29:40.37:0,40,295	0/0:23,0:23:54.69:0,55,297	0/0:17,0:17:22.01:0,22,78	0/0:24,0:24:56.09:0,56,304	0/1:12,0:12:13.99:14,0,19	1/1:0,18:18:48.16:648,48,0	1/1:0,16:16:35.92:465,36,0	1/1:1,30:31:69.22:929,69,0	0/0:22,0:22:39.03:0,39,145	0/0:17,0:17:19.26:0,19,93	0/0:37,0:37:58.09:0,58,229	0/0:28,0:28:56.27:0,56,212	0/0:20,0:20:38.98:0,39,432	0/0:16,0:16:35.97:0,36,345	0/0:30,0:30:74.89:0,75,733	1/1:1,12:13:21.06:283,21,0	0/0:9,0:9:0.70:0,1,33	0/0:25,0:25:43.67:0,44,192	1/1:1,11:12:21.06:284,21,0	0/0:22,0:22:55.44:0,55,303	0/0:13,0:13:14.62:0,15,54	0/0:18,0:18:31.05:0,31,98
chr10	13494386	.	G	GT	9479.13	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-11.352;DP=524;FS=21.402;HRun=0;HaplotypeScore=80.8198;InbreedingCoeff=0.9560;MQ=74.61;MQ0=0;MQRankSum=-1.791;QD=32.69;ReadPosRankSum=7.154;VQSLOD=3.1015;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:32.25:0,32,110	1/1:0,5:5:15.05:204,15,0	0/0:14,0:14:39.04:0,39,440	0/0:16,0:15:32.15:0,32,258	1/1:1,12:13:36.04:465,36,0	0/0:4,0:4:3.89:0,4,29	0/0:29,0:29:36.21:0,36,263	1/1:2,21:23:63.12:786,63,0	1/1:1,16:18:42.14:557,42,0	1/1:3,22:25:65.99:839,66,0	1/1:3,9:12:27.08:344,27,0	0/0:17,0:17:28.70:0,29,85	0/0:15,0:15:19.44:0,19,58	0/0:30,0:30:22.35:0,22,81	1/1:1,21:22:51.16:690,51,0	1/1:0,17:17:42.14:570,42,0	1/1:2,33:35:90.29:1203,90,0	1/1:1,27:28:75.24:1017,75,0	0/0:20,0:20:45.01:0,45,486	0/0:14,0:14:32.96:0,33,315	0/0:31,0:31:74.90:0,75,736	0/0:12,0:12:14.72:0,15,65	1/1:3,7:10:6.06:218,6,0	1/1:3,21:24:49.12:716,49,0	0/0:11,0:11:14.02:0,14,59	1/1:3,21:24:58:742,58,0	1/1:2,14:16:33.09:436,33,0	1/1:0,18:18:51.17:691,51,0
chr10	13499082	.	GT	G	1924.20	PASS	AB=0.678;AC=41;AF=0.820;AN=50;BaseQRankSum=-9.148;DP=183;FS=0.000;HRun=1;HaplotypeScore=185.1599;InbreedingCoeff=0.0617;MQ=28.84;MQ0=0;MQRankSum=-1.326;QD=12.18;ReadPosRankSum=-4.248;VQSLOD=0.7325;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,5:10:9.19:76,9,0	1/1:2,3:5:4.27:51,4,0	./.	./.	0/0:2,7:9:2.04:0,2,6	1/1:2,5:7:9.14:91,9,0	1/1:0,1:1:2.97:20,3,0	1/1:0,12:12:36.11:457,36,0	1/1:2,3:5:3.02:46,3,0	1/1:3,5:8:10.15:118,10,0	0/1:3,8:11:2.67:28,0,3	1/1:3,6:9:7.06:117,7,0	1/1:2,4:6:3.13:51,3,0	0/1:6,2:8:18.71:21,0,19	0/1:3,2:5:5.47:12,0,5	1/1:1,8:9:17.92:135,18,0	./.	1/1:3,3:6:4.36:110,4,0	1/1:2,4:5:7.70:113,8,0	0/0:5,10:15:7.45:0,7,21	1/1:1,5:6:3.68:36,4,0	0/1:5,3:8:9.87:22,0,10	0/1:3,9:12:19.33:29,0,19	1/1:1,3:4:2.22:17,2,0	1/1:1,5:6:14.81:100,15,0	1/1:0,8:8:20.98:231,21,0	1/1:0,3:3:8.98:95,9,0	1/1:1,2:3:3.92:73,4,0
chr10	13499122	.	G	GT	4954.52	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=1.188;DP=247;FS=15.402;HRun=0;HaplotypeScore=175.4010;InbreedingCoeff=0.7948;MQ=68.60;MQ0=5;MQRankSum=-5.617;QD=21.36;ReadPosRankSum=4.109;VQSLOD=4.2274;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,11:11:24.82:196,25,0	1/1:0,5:5:14.99:127,15,0	0/0:12,0:12:26.85:0,27,241	0/0:3,0:3:8.04:0,8,62	1/1:1,13:14:31.96:274,32,0	1/1:1,8:8:23.94:225,24,0	1/1:0,8:8:23.96:206,24,0	1/1:2,2:4:6.02:76,6,0	1/1:1,3:3:8.99:76,9,0	1/1:0,12:12:35.55:364,36,0	1/1:0,9:9:24.72:190,25,0	1/1:0,10:9:26.99:243,27,0	1/1:0,9:9:23.79:216,24,0	1/1:2,10:11:29.94:244,30,0	1/1:0,10:10:29.96:260,30,0	1/1:0,8:8:23.96:194,24,0	1/1:1,7:8:17.79:152,18,0	1/1:1,8:9:21.01:175,21,0	1/1:1,6:6:18.04:185,18,0	1/1:1,11:12:30.30:226,30,0	1/1:1,14:14:25.80:230,26,0	1/1:0,13:13:35.79:270,36,0	1/1:0,13:13:29.97:237,30,0	1/1:0,10:10:11.59:97,12,0	1/1:0,3:3:7.82:70,8,0	1/1:0,5:5:15.03:157,15,0	1/1:0,6:6:17.98:153,18,0	1/1:2,4:4:12.02:113,12,0
chr10	13499252	.	A	AC	9697.75	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=1.620;DP=603;FS=5.473;HRun=1;HaplotypeScore=90.6773;InbreedingCoeff=0.9726;MQ=43.98;MQ0=47;MQRankSum=-1.341;QD=32.22;ReadPosRankSum=1.664;VQSLOD=4.4599;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:52:99:0,123,1596	1/1:0,6:6:18.06:260,18,0	0/0:6,0:2:5.99:0,6,51	0/0:8,0:4:8.39:0,8,86	1/1:0,12:12:24.08:344,24,0	1/1:3,17:19:45.11:629,45,0	1/1:5,16:20:45.11:632,45,0	1/1:2,17:19:45.15:655,45,0	1/1:0,16:16:45.11:629,45,0	1/1:3,12:12:36.12:526,36,0	1/1:2,13:15:33.07:456,33,0	0/0:31,0:25:63.20:0,63,817	0/0:22,0:21:45.13:0,45,570	0/0:29,0:24:57.19:0,57,740	1/1:2,22:23:45.15:655,45,0	1/1:0,25:23:63.21:915,63,0	1/1:4,18:19:42.14:612,42,0	1/1:3,21:21:57.11:777,57,0	0/0:29,0:27:69.16:0,69,859	0/0:27,0:26:69.22:0,69,895	0/0:60,0:55:99:0,141,1828	0/0:16,0:14:39.13:0,39,503	1/1:2,18:18:45.59:629,46,0	1/1:8,14:15:30.07:413,30,0	0/0:17,0:15:45.15:0,45,584	1/1:2,12:12:36.12:526,36,0	1/1:0,20:20:54.18:781,54,0	1/1:0,6:6:18.06:260,18,0
chr10	13499524	.	T	TC	20937.43	PASS	AB=0.805;AC=54;AF=0.964;AN=56;BaseQRankSum=-0.572;DP=610;FS=4.713;HRun=1;HaplotypeScore=226.3465;InbreedingCoeff=-0.0378;MQ=59.48;MQ0=0;MQRankSum=-6.902;QD=34.32;ReadPosRankSum=3.010;VQSLOD=4.2427;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,42:46:99:1475,102,0	1/1:1,5:6:15.05:224,15,0	0/1:16,6:22:99:275,0,191	0/1:11,3:14:99:125,0,104	1/1:4,14:18:36.12:527,36,0	1/1:3,16:19:48.12:693,48,0	1/1:6,20:26:48.08:668,48,0	1/1:3,27:30:87.29:1302,87,0	1/1:0,21:21:63.21:942,63,0	1/1:1,14:15:36.12:539,36,0	1/1:1,15:16:42.14:628,42,0	1/1:2,18:20:57.19:847,57,0	1/1:4,20:24:63.15:885,63,0	1/1:3,32:35:99:1382,99,0	1/1:3,41:44:99:1719,120,0	1/1:2,26:28:81.16:1139,81,0	1/1:3,17:20:45.15:673,45,0	1/1:4,11:15:39.13:576,39,0	1/1:5,18:22:60.20:884,60,0	1/1:5,19:24:48.16:718,48,0	1/1:6,25:31:50.73:738,51,0	1/1:2,12:14:36.12:538,36,0	1/1:3,14:17:36.12:538,36,0	1/1:2,21:23:39.04:558,39,0	1/1:0,9:9:27.05:378,27,0	1/1:0,17:17:48.16:718,48,0	1/1:5,20:25:66.20:942,66,0	1/1:1,7:8:21.07:308,21,0
chr10	13499532	.	A	AC	21394.09	PASS	AB=0.763;AC=54;AF=0.964;AN=56;BaseQRankSum=-2.125;DP=597;FS=2.813;HRun=0;HaplotypeScore=228.4585;InbreedingCoeff=-0.0378;MQ=54.63;MQ0=0;MQRankSum=-5.268;QD=35.84;ReadPosRankSum=2.071;VQSLOD=4.1417;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,40:45:96.30:1505,96,0	1/1:1,6:7:18.06:287,18,0	0/1:9,6:15:33.33:228,0,33	0/1:10,2:13:59.39:91,0,59	1/1:4,17:21:39.12:598,39,0	1/1:0,19:19:45.15:707,45,0	1/1:3,23:26:57.18:885,57,0	1/1:2,30:32:96.31:1505,96,0	1/1:2,19:21:63.19:974,63,0	1/1:2,14:16:42.13:646,42,0	1/1:1,13:14:36.10:549,36,0	1/1:2,18:20:54.16:836,54,0	1/1:2,18:20:54.16:831,54,0	1/1:3,33:36:84.29:1337,84,0	1/1:3,40:43:99:1745,114,0	1/1:1,24:25:69.24:1099,69,0	1/1:0,16:16:39.13:621,39,0	1/1:1,13:14:39.13:613,39,0	1/1:2,18:20:60.18:903,60,0	1/1:1,21:22:48.15:741,48,0	1/1:5,24:29:42.08:621,42,0	1/1:1,11:12:33.10:502,33,0	1/1:1,17:18:33.11:525,33,0	1/1:4,23:27:39.06:597,39,0	1/1:1,10:11:21.07:334,21,0	1/1:3,17:20:54.18:850,54,0	1/1:4,25:29:63.19:978,63,0	1/1:0,6:6:18.06:287,18,0
chr10	13501412	.	A	AT	8195.31	PASS	AB=1.000;AC=55;AF=0.982;AN=56;DP=218;FS=0.000;HRun=1;HaplotypeScore=77.4325;InbreedingCoeff=0.1758;MQ=41.41;MQ0=0;QD=37.59;VQSLOD=4.9381;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,14:16:42.14:621,42,0	1/1:0,1:1:3.01:45,3,0	1/1:1,0:1:3.01:43,3,0	0/1:2,0:2:0:0,0,0	1/1:0,8:9:15.05:224,15,0	1/1:0,14:14:39.13:581,39,0	1/1:0,12:12:36.12:537,36,0	1/1:2,4:6:18.03:245,18,0	1/1:0,6:6:18.06:269,18,0	1/1:0,8:8:24.08:357,24,0	1/1:0,2:2:6.02:90,6,0	1/1:1,16:17:51.17:758,51,0	1/1:0,4:4:12.04:179,12,0	1/1:0,13:13:39.13:579,39,0	1/1:0,9:9:27.09:403,27,0	1/1:0,9:9:27.09:403,27,0	1/1:0,5:5:15.05:222,15,0	1/1:1,9:10:27.09:400,27,0	1/1:0,5:5:15.05:224,15,0	1/1:0,3:3:8.82:102,9,0	1/1:3,18:21:42.14:613,42,0	1/1:0,4:4:12.04:179,12,0	1/1:2,5:7:6.02:90,6,0	1/1:1,11:12:9.01:134,9,0	1/1:0,5:5:12.04:179,12,0	1/1:1,10:11:30.10:448,30,0	1/1:0,5:5:15.05:224,15,0	1/1:0,1:1:3.01:45,3,0
chr10	13504606	.	TG	T	2716.19	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=11.172;DP=633;FS=4.062;HRun=4;HaplotypeScore=63.4296;InbreedingCoeff=0.9975;MQ=79.49;MQ0=0;MQRankSum=-0.396;QD=29.52;ReadPosRankSum=1.494;VQSLOD=3.7131;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,24:25:63.19:753,63,0	0/0:6,0:6:18.06:0,18,252	0/0:18,0:18:51.13:0,51,678	0/0:18,0:18:35.29:0,35,418	0/0:29,0:29:81.25:0,81,1100	0/0:35,0:34:99:0,102,1427	0/0:13,0:13:36.10:0,36,482	0/0:29,0:29:87.29:0,87,1218	0/0:17,0:17:51.17:0,51,714	0/0:21,0:21:60.20:0,60,827	0/0:20,0:20:54.17:0,54,740	1/1:1,13:14:30.09:360,30,0	0/0:20,0:20:54.18:0,54,756	0/0:21,0:21:60.20:0,60,840	0/0:20,0:20:57.19:0,57,792	0/0:27,0:27:81.27:0,81,1134	0/0:29,0:29:81.24:0,81,1100	0/0:16,0:16:48.08:0,48,627	0/0:23,0:23:69.20:0,69,944	0/0:32,0:32:93.31:0,93,1302	0/0:30,0:30:83.07:0,83,1122	1/1:0,26:26:72.22:864,72,0	0/0:24,0:24:66.11:0,66,898	0/0:12,0:12:36.12:0,36,499	1/1:1,26:27:75.23:900,75,0	0/0:19,0:19:54.16:0,54,723	0/0:40,0:40:99:0,114,1594	0/0:22,0:22:48.01:0,48,623
chr10	13504695	.	GT	G	8796.02	PASS	AB=1.000;AC=49;AF=0.875;AN=56;BaseQRankSum=-6.814;DP=598;FS=0.000;HRun=9;HaplotypeScore=88.5421;InbreedingCoeff=0.7730;MQ=68.22;MQ0=2;MQRankSum=3.127;QD=16.79;ReadPosRankSum=1.942;VQSLOD=4.9889;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,19:22:50.78:436,51,0	1/1:1,9:10:24.01:218,24,0	0/0:28,0:10:6.13:0,6,107	0/1:11,0:7:15.63:16,0,20	1/1:6,26:32:77.95:688,78,0	0/0:22,0:22:54.16:0,54,623	0/0:24,0:24:36.10:0,36,414	1/1:9,20:28:59.92:519,60,0	1/1:11,6:17:26.99:243,27,0	1/1:6,14:20:18.69:354,19,0	1/1:11,12:23:56.99:516,57,0	1/1:6,9:15:12.53:229,13,0	1/1:3,16:19:18.01:163,18,0	1/1:5,12:17:11.09:108,11,0	1/1:4,14:18:24.01:219,24,0	1/1:0,18:18:39.02:356,39,0	1/1:8,18:26:32.58:267,33,0	1/1:2,6:7:12:110,12,0	1/1:3,20:23:63.01:570,63,0	1/1:2,20:22:60.01:538,60,0	1/1:3,16:19:18.01:165,18,0	1/1:4,22:26:62.63:549,63,0	1/1:3,26:29:44.53:409,45,0	1/1:9,8:17:30.01:272,30,0	1/1:9,15:24:53.98:475,54,0	1/1:0,22:22:62.94:565,63,0	1/1:9,25:34:47.78:426,48,0	1/1:1,20:21:42.02:383,42,0
chr10	13504708	.	T	TTTC	3838.52	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-2.424;DP=653;FS=2.215;HRun=0;HaplotypeScore=145.7918;InbreedingCoeff=0.9304;MQ=66.75;MQ0=2;MQRankSum=-4.415;QD=30.46;ReadPosRankSum=4.452;VQSLOD=3.9816;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,16:22:59.99:933,60,0	0/0:11,0:11:30.01:0,30,393	0/0:32,0:10:2.54:0,3,68	0/0:20,0:11:18.02:0,18,169	0/0:43,0:43:99:0,111,1169	1/1:19,0:20:43.50:172,43,0	1/1:19,0:19:30.17:138,30,0	0/0:31,0:30:79.99:0,80,860	0/0:20,0:20:36.01:0,36,444	0/0:25,0:25:69.02:0,69,815	0/0:28,0:28:80.31:0,80,1058	1/1:11,5:16:43.79:538,44,0	0/0:22,0:22:3.74:0,4,355	0/0:21,0:21:35.92:0,36,401	0/0:17,0:17:33.98:0,34,491	0/0:22,0:22:50.75:0,51,737	0/0:26,0:26:47.41:0,47,627	0/0:13,0:12:30.05:0,30,377	0/0:30,0:30:87.05:0,87,1011	0/0:26,0:26:58.99:0,59,800	0/0:17,0:17:21.07:0,21,348	1/1:11,14:25:74.99:1022,75,0	0/0:33,0:33:61.74:0,62,833	0/0:17,0:17:32.78:0,33,463	1/1:8,15:23:57.80:1036,58,0	0/0:24,0:24:62.53:0,63,796	0/0:33,0:33:70.69:0,71,900	0/0:16,0:16:42.14:0,42,662
chr10	13504709	.	T	TTTC	2136.06	PASS	AB=0.889;AC=11;AF=0.196;AN=56;BaseQRankSum=2.393;DP=651;FS=2.449;HRun=0;HaplotypeScore=145.7083;InbreedingCoeff=0.7880;MQ=66.06;MQ0=2;MQRankSum=-3.034;QD=16.82;ReadPosRankSum=6.940;VQSLOD=3.3771;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:22:1.17:173,1,0	0/0:11,0:11:30.02:0,30,391	0/0:31,0:9:2.41:0,2,110	0/0:20,0:11:23.66:0,24,174	0/0:43,0:43:99:0,113,1196	1/1:1,19:20:57.20:1080,57,0	1/1:1,18:20:36.59:690,37,0	0/0:31,0:30:83.85:0,84,898	0/0:20,0:20:35.96:0,36,440	0/0:26,0:26:69.05:0,69,821	0/0:27,0:27:80.45:0,80,1047	0/1:14,0:16:8.70:52,0,9	0/0:22,0:22:31.11:0,31,381	0/0:21,0:21:35.93:0,36,404	0/0:17,0:17:33.99:0,34,488	0/0:22,0:22:51.16:0,51,753	0/0:26,0:26:46.29:0,46,617	0/0:12,0:11:30.05:0,30,376	0/0:30,0:30:86.10:0,86,981	0/0:26,0:26:68.92:0,69,826	0/0:17,0:17:21.07:0,21,345	1/1:20,0:25:24.22:204,24,0	0/0:31,0:31:61.82:0,62,836	0/0:17,0:17:33.11:0,33,480	1/1:23,0:23:7.15:102,7,0	0/0:24,0:24:61.65:0,62,789	0/0:34,0:34:70.40:0,70,896	0/0:16,0:16:42.14:0,42,653
chr10	13505387	.	CT	C	5177.98	PASS	AB=0.887;AC=42;AF=0.750;AN=56;BaseQRankSum=-2.680;DP=540;FS=0.000;HRun=14;HaplotypeScore=95.1004;InbreedingCoeff=0.8439;MQ=68.58;MQ0=1;MQRankSum=-0.451;QD=12.82;ReadPosRankSum=2.093;VQSLOD=4.7471;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:61.93:0,62,307	1/1:0,9:10:28.79:190,29,0	0/1:14,1:12:1.41:1,0,20	0/1:10,1:10:12.94:13,0,14	1/1:12,14:27:51.77:338,52,0	0/0:31,0:31:60.93:0,61,286	0/0:14,0:14:27.77:0,28,127	1/1:5,22:27:55.73:427,56,0	1/1:4,11:15:21.42:194,21,0	1/1:4,22:26:65.26:448,65,0	1/1:10,15:26:44.72:296,45,0	0/0:25,0:25:50.06:0,50,285	1/1:3,11:14:32.70:226,33,0	1/1:4,7:12:16.86:108,17,0	1/1:0,17:17:38.63:266,39,0	1/1:3,18:21:47.51:328,48,0	1/1:4,21:25:41.60:287,42,0	1/1:3,6:9:22.05:146,22,0	1/1:5,11:16:16.19:202,16,0	1/1:9,16:27:43.28:319,43,0	1/1:2,4:7:14.35:90,14,0	0/0:23,0:23:46.43:0,46,281	1/1:4,23:28:50.69:390,51,0	1/1:0,10:11:25.80:170,26,0	0/0:16,0:16:31.77:0,32,173	1/1:4,19:23:42.63:371,43,0	1/1:7,16:23:30.91:208,31,0	1/1:2,9:11:10.13:160,10,0
chr10	13505401	.	T	TA	9636.56	PASS	AB=0.944;AC=53;AF=0.946;AN=56;BaseQRankSum=-3.309;DP=596;FS=1.002;HRun=2;HaplotypeScore=96.1359;InbreedingCoeff=0.5877;MQ=72.47;MQ0=1;MQRankSum=0.191;QD=16.94;ReadPosRankSum=3.370;VQSLOD=5.0714;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,29:32:62.70:747,63,0	1/1:12,0:12:34.78:218,35,0	0/0:27,0:19:5.30:0,5,122	0/1:15,0:15:8.98:9,0,31	1/1:21,0:21:55.43:354,55,0	1/1:30,1:31:33.17:341,33,0	1/1:14,0:14:27.66:146,28,0	1/1:27,0:27:76.17:540,76,0	1/1:18,0:18:46.09:309,46,0	1/1:32,0:32:86.56:630,87,0	1/1:32,0:32:76.32:535,76,0	1/1:6,16:24:30.14:352,30,0	1/1:14,0:14:33.15:238,33,0	1/1:10,0:10:23.75:166,24,0	1/1:21,0:21:50.42:353,50,0	1/1:23,0:23:59.28:411,59,0	1/1:33,0:33:74.10:526,74,0	1/1:9,0:9:26.49:174,26,0	1/1:17,0:17:42.92:320,43,0	1/1:23,0:23:59.16:372,59,0	1/1:8,0:8:23.33:161,23,0	1/1:5,16:22:28.88:412,29,0	1/1:35,0:35:93.44:637,93,0	1/1:11,0:11:26.58:168,27,0	1/1:0,14:14:30.03:352,30,0	1/1:29,0:29:79.80:568,80,0	1/1:21,0:21:44.38:301,44,0	1/1:19,0:19:49.29:299,49,0
chr10	13505784	.	CTTT	C	5694.99	PASS	AB=0.712;AC=45;AF=0.804;AN=56;BaseQRankSum=0.329;DP=488;FS=6.329;HRun=17;HaplotypeScore=91.9560;InbreedingCoeff=0.5360;MQ=62.18;MQ0=2;MQRankSum=-0.210;QD=12.71;ReadPosRankSum=5.591;VQSLOD=2.2547;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,0:26:43.65:259,44,0	0/0:3,0:3:0:0,0,0	0/0:17,0:13:19:0,19,235	0/0:9,0:7:5.81:0,6,53	1/1:7,16:24:19.58:265,20,0	1/1:8,0:19:25.98:160,26,0	1/1:4,0:18:36.88:225,37,0	1/1:16,2:24:2.88:204,3,0	0/0:3,0:9:7.94:0,8,30	1/1:8,9:19:35.54:329,36,0	1/1:4,13:18:33.36:351,33,0	1/1:5,0:19:36.42:223,36,0	0/1:8,13:21:3.08:189,0,3	1/1:8,4:13:20.58:186,21,0	1/1:4,9:14:23.87:233,24,0	1/1:4,9:15:12.35:245,12,0	1/1:7,16:24:13.75:303,14,0	1/1:7,7:15:14.63:179,15,0	1/1:14,2:17:13.56:191,14,0	1/1:7,11:19:26.40:256,26,0	0/1:11,0:13:11.53:12,0,19	1/1:2,0:19:40.80:242,41,0	0/1:7,7:15:2.47:123,0,2	1/1:4,5:10:19:161,19,0	1/1:3,0:20:43.75:261,44,0	1/1:13,11:25:15:276,15,0	1/1:6,21:28:55.12:568,55,0	1/1:2,9:12:4.66:253,5,0
chr10	13505963	.	AAAAAAAGAAAAG	A	905.30	PASS	AB=0.811;AC=6;AF=0.107;AN=56;BaseQRankSum=-0.151;DP=463;FS=9.441;HRun=0;HaplotypeScore=134.8090;InbreedingCoeff=0.2643;MQ=44.60;MQ0=44;MQRankSum=1.335;QD=11.46;ReadPosRankSum=-2.632;VQSLOD=1.3790;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:12,21:30:2.25:170,0,2	0/0:3,0:1:3.01:0,3,39	0/0:23,0:7:17.83:0,18,330	0/0:26,0:8:18.10:0,18,317	0/0:13,0:11:9.03:0,9,262	0/0:14,0:13:29.79:0,30,498	0/0:16,0:13:29.05:0,29,797	0/0:29,0:28:58.13:0,58,1414	0/0:7,0:5:8.44:0,8,186	0/0:20,0:18:42.51:0,43,1061	0/0:10,0:8:18.06:0,18,574	0/1:8,0:7:99:138,0,240	0/0:18,0:17:41.79:0,42,1101	0/1:11,0:11:25.35:25,0,455	0/0:18,0:17:44.12:0,44,900	0/0:16,0:14:35.63:0,36,1190	0/0:33,0:28:52.76:0,53,1479	0/0:19,0:12:4.26:0,4,80	0/0:15,0:14:34.74:0,35,685	0/0:16,0:15:42.13:0,42,1002	0/0:7,0:5:11.76:0,12,148	0/1:5,7:11:99:308,0,103	0/0:5,0:3:7.26:0,7,84	0/0:17,0:13:27.15:0,27,655	1/1:15,0:15:18.04:392,18,0	0/0:30,0:27:64.91:0,65,1486	0/0:21,0:19:41.04:0,41,1276	0/0:8,0:7:17.51:0,18,526
chr10	13505968	.	AAG	A	3165.62	PASS	AB=0.991;AC=49;AF=0.875;AN=56;BaseQRankSum=-6.538;DP=463;FS=29.879;HRun=0;HaplotypeScore=64.1884;InbreedingCoeff=0.1993;MQ=48.24;MQ0=41;MQRankSum=-0.428;QD=7.26;ReadPosRankSum=-5.911;VQSLOD=-0.0479;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:26:10.31:45,10,0	1/1:3,0:1:0.89:2,1,0	0/1:25,0:9:3.94:4,0,57	0/0:27,0:8:14.75:0,15,117	1/1:13,0:11:8.92:61,9,0	1/1:11,0:10:16.01:94,16,0	1/1:16,0:13:30.88:212,31,0	1/1:33,0:32:14.26:264,14,0	1/1:7,0:6:10.46:67,10,0	1/1:20,0:18:30.54:217,31,0	1/1:11,0:9:15.50:93,15,0	0/1:7,0:6:21.82:45,0,22	1/1:19,0:18:32.19:208,32,0	1/1:10,0:10:12.71:122,13,0	1/1:19,0:18:29.57:187,30,0	1/1:15,0:13:1.75:91,2,0	1/1:31,1:27:4.57:139,5,0	0/1:20,1:14:4.44:11,0,4	1/1:16,0:15:41:286,41,0	1/1:16,0:15:15.71:155,16,0	1/1:7,0:6:11:77,11,0	1/1:12,0:11:3.35:84,3,0	1/1:4,1:3:1.02:23,1,0	0/1:18,0:14:3.21:88,0,3	1/1:13,0:13:29.60:221,30,0	1/1:30,1:29:5.18:309,5,0	1/1:19,0:17:20.86:166,21,0	0/1:8,0:7:3.74:21,0,4
chr10	13505969	.	AG	A	4597.62	PASS	AB=1.000;AC=52;AF=0.929;AN=56;BaseQRankSum=-3.306;DP=453;FS=15.054;HRun=1;HaplotypeScore=53.9050;InbreedingCoeff=0.3537;MQ=48.75;MQ0=39;MQRankSum=-0.498;QD=10.79;ReadPosRankSum=0.042;VQSLOD=1.2577;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:23:8.73:31,9,0	1/1:3,0:1:2.94:18,3,0	0/1:25,0:9:13.33:13,0,41	0/0:27,0:8:10.99:0,11,109	1/1:2,10:10:8.92:61,9,0	1/1:10,0:9:20.52:111,21,0	1/1:16,0:13:35.88:249,36,0	1/1:32,1:32:60.78:431,61,0	1/1:7,0:6:13.20:86,13,0	1/1:20,0:18:43.73:310,44,0	1/1:2,9:9:15.42:106,15,0	0/1:6,0:6:0.59:41,0,1	1/1:18,1:18:44.57:308,45,0	1/1:10,0:10:25.06:171,25,0	1/1:19,0:18:43.14:264,43,0	1/1:14,1:13:33.18:219,33,0	1/1:33,0:28:50.06:311,50,0	1/1:9,12:14:4.51:23,5,0	1/1:1,15:15:40.78:326,41,0	1/1:14,1:14:29.53:204,30,0	1/1:6,0:5:11.19:78,11,0	1/1:11,1:11:15.23:98,15,0	1/1:5,0:3:6.37:37,6,0	1/1:18,0:14:12.57:165,13,0	1/1:12,0:12:29.33:219,29,0	1/1:31,0:29:37.99:392,38,0	1/1:16,1:16:38.38:252,38,0	1/1:8,0:7:15.24:74,15,0
chr10	13506137	.	ATGGGC	A	2192.84	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=9.599;DP=509;FS=6.588;HRun=0;HaplotypeScore=95.4291;InbreedingCoeff=0.9918;MQ=80.50;MQ0=0;MQRankSum=-9.393;QD=48.73;ReadPosRankSum=2.332;VQSLOD=3.7619;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,13:16:30.10:653,30,0	0/0:8,0:8:24.08:0,24,775	0/0:12,0:12:36.11:0,36,1009	0/0:18,0:18:51:0,51,1408	0/0:22,0:22:60.21:0,60,1937	0/0:13,0:13:33.11:0,33,1018	0/0:17,0:17:51.17:0,51,1587	0/0:33,0:33:99:0,99,2917	0/0:12,0:12:33.10:0,33,925	0/0:19,0:19:57.20:0,57,1756	0/0:24,0:24:66.21:0,66,1980	1/1:0,8:8:24.08:526,24,0	0/0:19,0:19:57.20:0,57,1793	0/0:11,0:11:33.11:0,33,1064	0/0:25,0:25:72.20:0,72,2245	0/0:15,0:15:45.15:0,45,1392	0/0:34,0:34:99:0,99,3109	0/0:21,0:21:63.22:0,63,1923	0/0:21,0:21:60.16:0,60,1651	0/0:22,0:22:66.23:0,66,2025	0/0:24,0:24:72.25:0,72,2246	1/1:0,5:5:15.05:334,15,0	0/0:6,0:6:18.04:0,18,507	0/0:15,0:15:45.15:0,45,1362	1/1:0,16:16:39.13:839,39,0	0/0:20,0:20:57.20:0,57,1822	0/0:19,0:19:54.18:0,54,1612	0/0:34,0:34:99:0,102,3099
chr10	13506901	.	A	ATT	16475.74	PASS	AB=1.000;AC=53;AF=0.946;AN=56;BaseQRankSum=-6.464;DP=513;FS=6.989;HRun=7;HaplotypeScore=60.9842;InbreedingCoeff=0.7713;MQ=77.56;MQ0=3;MQRankSum=-7.819;QD=33.15;ReadPosRankSum=4.751;VQSLOD=4.4681;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,19:25:54.18:886,54,0	1/1:2,8:10:18.06:295,18,0	0/0:16,0:15:42.07:0,42,464	0/1:15,0:15:3.23:3,0,296	1/1:1,19:20:54.09:826,54,0	1/1:2,0:29:59.89:211,60,0	1/1:2,0:20:34.93:123,35,0	1/1:8,23:32:72.21:1122,72,0	1/1:4,14:18:36.12:591,36,0	1/1:2,20:22:60.17:949,60,0	1/1:3,7:11:24.03:344,24,0	1/1:0,10:11:24.08:394,24,0	1/1:1,9:10:24.08:394,24,0	1/1:3,14:17:42.14:689,42,0	1/1:1,21:22:60.20:985,60,0	1/1:1,9:10:18.06:295,18,0	1/1:1,26:27:45.35:967,45,0	1/1:1,17:18:33.11:542,33,0	1/1:3,12:20:49.60:685,50,0	1/1:3,12:15:39.10:601,39,0	1/1:1,17:18:42.14:689,42,0	1/1:0,15:16:48.03:698,48,0	1/1:1,15:16:42.14:689,42,0	1/1:3,17:19:45.15:739,45,0	1/1:1,16:18:48.15:748,48,0	1/1:4,20:24:60.08:877,60,0	1/1:3,11:15:27.09:443,27,0	1/1:1,14:15:42.14:689,42,0
chr10	13507035	.	G	GTTT	9856.69	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-2.767;DP=313;FS=0.000;HRun=11;HaplotypeScore=70.9334;InbreedingCoeff=0.7372;MQ=72.22;MQ0=0;MQRankSum=-1.605;QD=33.87;ReadPosRankSum=2.075;VQSLOD=4.4060;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,1:20:38.89:335,39,0	1/1:2,6:9:15.05:269,15,0	0/0:10,0:10:5.63:0,6,47	0/0:10,0:8:8.42:0,8,61	1/1:6,11:19:42.14:715,42,0	1/1:7,0:16:37.51:490,38,0	1/1:2,0:4:9.03:129,9,0	1/1:12,4:19:27.01:359,27,0	1/1:3,3:6:15.01:243,15,0	1/1:7,13:21:54.16:919,54,0	1/1:1,7:9:24.08:428,24,0	1/1:0,0:7:17.43:120,17,0	1/1:3,3:6:9.03:169,9,0	1/1:1,7:8:18.06:338,18,0	1/1:2,4:7:15.05:268,15,0	1/1:4,5:9:19.58:289,20,0	1/1:6,12:18:39.11:700,39,0	1/1:4,7:16:34.32:542,34,0	1/1:4,5:9:24.08:449,24,0	1/1:3,2:6:9.03:162,9,0	1/1:1,3:4:9.03:133,9,0	1/1:0,0:4:11.95:92,12,0	1/1:4,2:8:15.05:254,15,0	1/1:0,4:5:15.05:268,15,0	1/1:2,2:18:50.86:459,51,0	1/1:8,14:23:57.13:964,57,0	1/1:2,6:8:21.07:395,21,0	1/1:7,4:11:27.01:367,27,0
chr10	13507063	.	C	CTTAT	7616.76	PASS	AC=40;AF=0.800;AN=50;BaseQRankSum=-3.997;DP=280;FS=0.000;HRun=0;HaplotypeScore=66.7606;InbreedingCoeff=0.6907;MQ=54.31;MQ0=0;MQRankSum=-2.739;QD=33.70;ReadPosRankSum=-1.242;VQSLOD=3.8916;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:15.05:0,15,252	1/1:4,2:6:9.02:173,9,0	0/0:10,0:7:9.03:0,9,136	0/0:5,0:2:3.01:0,3,50	1/1:5,9:14:21.07:496,21,0	1/1:8,7:13:21.07:485,21,0	1/1:2,1:3:3.01:74,3,0	1/1:18,13:30:57.15:1316,57,0	1/1:4,2:7:6.02:149,6,0	1/1:13,5:18:21.07:473,21,0	1/1:6,0:6:3.01:53,3,0	0/0:4,0:4:9.03:0,9,147	1/1:4,5:9:18.05:379,18,0	1/1:5,3:8:9.03:221,9,0	1/1:2,2:4:3.01:74,3,0	1/1:4,4:7:9.03:223,9,0	1/1:9,10:19:21.07:485,21,0	1/1:7,10:18:30.10:743,30,0	1/1:11,6:17:20.99:455,21,0	1/1:4,0:4:6.02:77,6,0	./.	./.	./.	1/1:3,0:3:3.01:72,3,0	0/0:12,0:12:24.08:0,24,398	1/1:5,11:16:33.11:817,33,0	1/1:5,7:11:21.07:481,21,0	1/1:2,5:8:15.05:371,15,0
chr10	13507225	.	A	AT	8284.53	PASS	AB=0.589;AC=42;AF=0.750;AN=56;BaseQRankSum=6.241;DP=453;FS=7.654;HRun=10;HaplotypeScore=84.8658;InbreedingCoeff=0.7757;MQ=62.83;MQ0=0;MQRankSum=-0.968;QD=21.69;ReadPosRankSum=-0.294;VQSLOD=5.2681;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:62.87:0,63,515	1/1:0,4:4:12.03:128,12,0	0/0:7,0:7:10.10:0,10,93	0/0:7,0:5:2.99:0,3,25	1/1:3,7:10:21.05:223,21,0	1/1:0,25:24:63.16:672,63,0	1/1:1,10:11:27.07:288,27,0	1/1:11,25:37:13.12:739,13,0	1/1:4,8:12:21.05:224,21,0	1/1:2,12:14:36.09:384,36,0	1/1:0,6:6:18.05:192,18,0	0/0:8,0:8:14.97:0,15,123	1/1:5,10:15:30.55:321,31,0	1/1:3,9:12:18.05:192,18,0	0/1:7,15:22:4.07:371,0,4	1/1:2,21:24:47.95:494,48,0	1/1:0,13:13:30.08:320,30,0	1/1:4,13:17:33.08:352,33,0	1/1:9,19:28:32.47:534,32,0	0/1:2,5:7:3.43:141,0,3	1/1:5,19:24:36.56:384,37,0	0/0:3,0:3:5.99:0,6,49	1/1:0,8:8:24.06:256,24,0	1/1:4,16:20:23.42:442,23,0	0/0:14,0:14:35.92:0,36,292	1/1:12,23:35:50.51:725,51,0	1/1:5,17:22:29.49:519,29,0	1/1:4,12:16:36.98:386,37,0
chr10	13509567	.	T	TTC	291.62	PASS	AB=0.969;AC=13;AF=0.232;AN=56;BaseQRankSum=-3.332;DP=579;FS=0.000;HRun=0;HaplotypeScore=78.5632;InbreedingCoeff=-0.3077;MQ=40.90;MQ0=103;MQRankSum=1.810;QD=0.96;ReadPosRankSum=2.313;VQSLOD=1.4100;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:23:44.02:0,44,367	0/1:5,5:9:37.79:38,0,43	0/0:39,0:5:8.78:0,9,55	0/1:41,0:5:0.63:1,0,17	0/1:25,1:18:27.01:27,0,153	0/0:19,0:18:38.26:0,38,222	0/0:14,0:14:25.68:0,26,170	0/1:43,0:37:67.77:68,0,334	0/1:15,0:14:30.76:31,0,94	0/1:24,0:21:14.71:15,0,181	0/1:16,0:16:30.02:30,0,152	0/0:12,0:5:13.56:0,14,79	0/0:19,0:13:17.16:0,17,107	0/0:19,0:16:4.66:0,5,99	0/0:8,0:7:16.29:0,16,96	0/0:9,0:6:8.30:0,8,43	0/0:37,0:35:0.68:0,1,216	0/0:28,0:21:23.34:0,23,181	0/1:34,0:20:58.36:58,0,106	0/0:15,0:11:24.90:0,25,146	0/0:9,0:7:8.71:0,9,51	0/0:2,0:2:6:0,6,54	0/1:16,0:13:3.87:4,0,118	0/1:13,0:12:40.32:40,0,54	0/0:16,0:12:22.40:0,22,161	0/1:20,0:14:16.14:16,0,146	0/1:19,0:13:3.03:3,0,71	0/1:26,0:15:46.99:102,0,47
chr10	13509592	.	C	CTT	2776.50	PASS	AB=0.927;AC=40;AF=0.741;AN=54;BaseQRankSum=2.481;DP=446;FS=0.000;HRun=11;HaplotypeScore=75.9134;InbreedingCoeff=0.4271;MQ=40.64;MQ0=65;MQRankSum=-2.811;QD=7.91;ReadPosRankSum=-1.107;VQSLOD=0.3583;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:26:6.92:0,7,264	0/1:7,0:6:12.88:141,0,13	0/0:15,0:3:2.68:0,3,11	./.	1/1:16,1:13:13.09:105,13,0	1/1:13,0:11:5.72:132,6,0	1/1:14,0:11:11.15:76,11,0	1/1:17,5:21:20.09:253,20,0	1/1:12,1:11:15.05:196,15,0	1/1:17,0:13:20.98:210,21,0	1/1:12,2:13:20.24:174,20,0	0/0:13,0:8:14.88:0,15,139	1/1:16,0:13:17.41:176,17,0	1/1:14,0:10:8.51:75,9,0	1/1:6,0:6:6.02:79,6,0	1/1:9,0:7:12.04:158,12,0	1/1:23,18:39:7.54:52,8,0	0/1:18,7:20:19.99:64,0,20	1/1:20,0:14:14.81:143,15,0	0/1:16,0:15:4.40:178,0,4	0/1:4,0:3:15.52:16,0,20	0/0:6,0:6:5.84:0,6,58	1/1:12,2:12:20.05:217,20,0	1/1:14,0:13:9.97:115,10,0	0/0:15,0:12:4.14:0,4,140	1/1:9,1:12:16.08:175,16,0	1/1:15,0:11:8.80:77,9,0	1/1:18,0:10:17.16:126,17,0
chr10	13515338	.	A	ACAGAGGCACTTAGT	23384.68	PASS	AB=0.750;AC=55;AF=0.982;AN=56;BaseQRankSum=0.577;DP=269;FS=17.482;HRun=0;HaplotypeScore=352.4217;InbreedingCoeff=-0.0394;MQ=55.35;MQ0=0;MQRankSum=-1.611;QD=86.93;ReadPosRankSum=1.428;VQSLOD=3.7676;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,0:12:23.29:827,23,0	1/1:9,0:9:9.03:524,9,0	1/1:2,1:6:14.64:511,15,0	0/1:2,0:3:14.16:96,0,14	1/1:8,0:8:9.03:269,9,0	1/1:15,0:15:33.99:1392,34,0	1/1:6,0:6:15.52:580,16,0	1/1:11,0:11:33.11:1557,33,0	1/1:11,0:11:24.08:1242,24,0	1/1:7,0:7:12.92:447,13,0	1/1:9,0:9:15.05:628,15,0	1/1:15,0:15:30.57:1294,31,0	1/1:11,0:11:24.97:1087,25,0	1/1:12,0:12:24.08:1145,24,0	1/1:10,0:10:21.07:1166,21,0	1/1:13,0:13:24.08:1203,24,0	1/1:5,0:5:15.05:768,15,0	1/1:4,0:4:9.03:543,9,0	1/1:9,0:9:21.07:1173,21,0	1/1:11,0:11:21.06:960,21,0	1/1:19,0:19:24.07:1155,24,0	1/1:9,0:9:12.04:674,12,0	1/1:8,0:8:9.03:435,9,0	1/1:12,0:12:6.02:231,6,0	1/1:8,0:8:15.05:677,15,0	1/1:9,0:9:23.29:1268,23,0	1/1:13,0:13:24.08:1442,24,0	1/1:4,0:4:6.02:89,6,0
chr10	13523293	.	G	GGTT	12458.64	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=3.560;DP=521;FS=28.877;HRun=0;HaplotypeScore=171.9688;InbreedingCoeff=0.9842;MQ=53.15;MQ0=12;MQRankSum=-6.770;QD=32.79;ReadPosRankSum=-2.655;VQSLOD=3.1920;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:65.78:0,66,1064	1/1:10,2:12:32.94:435,33,0	0/0:33,0:13:23.55:0,24,334	0/0:31,0:9:19.71:0,20,190	1/1:16,3:19:44.47:605,44,0	1/1:10,0:12:38.86:361,39,0	1/1:11,0:14:39.49:392,39,0	1/1:19,3:22:60.27:785,60,0	1/1:17,2:18:44.37:422,44,0	1/1:14,4:17:48.89:660,49,0	1/1:16,5:21:55.41:757,55,0	0/0:18,0:18:38.53:0,39,620	1/1:15,1:13:24.06:413,24,0	1/1:15,1:16:27.59:437,28,0	1/1:11,2:12:30.93:458,31,0	1/1:13,2:15:41.78:674,42,0	1/1:23,7:30:80.87:1172,81,0	1/1:11,7:19:50.98:816,51,0	1/1:13,7:20:49.95:644,50,0	1/1:15,3:17:39.31:591,39,0	1/1:12,0:12:26.95:337,27,0	0/0:11,0:11:25.27:0,25,358	1/1:9,3:13:32.48:427,32,0	1/1:8,3:10:19.63:343,20,0	0/0:20,0:20:41.47:0,41,588	1/1:13,7:22:60.26:947,60,0	1/1:21,2:23:43.02:634,43,0	1/1:5,1:5:9.02:148,9,0
chr10	13523303	.	TG	T	3214.87	PASS	AB=0.971;AC=36;AF=0.643;AN=56;BaseQRankSum=6.425;DP=530;FS=4.263;HRun=1;HaplotypeScore=113.8175;InbreedingCoeff=0.0572;MQ=46.56;MQ0=20;MQRankSum=-3.746;QD=7.41;ReadPosRankSum=0.265;VQSLOD=0.7486;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:31:18.96:0,19,528	0/1:11,1:11:2.29:152,0,2	0/0:32,1:9:5.31:0,5,105	0/1:36,2:8:13.11:13,0,41	1/1:23,1:23:23.37:191,23,0	1/1:8,1:9:21.70:124,22,0	1/1:12,0:12:14.37:142,14,0	0/1:20,2:22:36.99:162,0,37	1/1:17,2:18:39.09:247,39,0	0/1:20,1:19:21.19:186,0,21	0/1:22,0:19:4.99:167,0,5	0/0:21,0:21:32.79:0,33,295	1/1:13,3:13:0.76:68,1,0	1/1:8,2:10:4.75:83,5,0	0/1:13,0:12:20.23:85,0,20	0/1:15,0:15:25.12:121,0,25	1/1:27,1:28:29.86:259,30,0	1/1:14,2:16:21.78:165,22,0	0/1:28,2:23:47.51:188,0,48	1/1:14,2:15:14.34:125,14,0	0/1:6,0:6:6.67:50,0,7	0/0:10,0:10:9.81:0,10,170	1/1:15,2:17:14.12:184,14,0	1/1:11,1:11:18.02:116,18,0	0/1:20,0:20:9.57:10,0,277	0/1:26,1:27:27.69:290,0,28	1/1:19,2:21:37.87:217,38,0	0/1:8,0:7:5.90:45,0,6
chr10	13523319	.	GT	G	1229.70	PASS	AB=0.787;AC=30;AF=0.536;AN=56;BaseQRankSum=-0.501;DP=555;FS=12.366;HRun=14;HaplotypeScore=111.2004;InbreedingCoeff=-0.2902;MQ=46.17;MQ0=24;MQRankSum=-0.045;QD=2.70;ReadPosRankSum=-0.187;VQSLOD=-0.5170;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:42.01:0,42,368	0/1:9,3:11:1.92:74,0,2	1/1:33,1:6:2.47:26,2,0	0/0:39,1:6:3:0,3,27	0/1:22,1:22:25.72:41,0,26	0/1:4,6:10:0.61:70,0,1	0/1:7,6:13:47.09:47,0,61	0/1:19,4:21:34.86:64,0,35	1/1:11,10:20:28.45:197,28,0	1/1:13,6:17:5.36:88,5,0	0/1:16,4:18:30.57:31,0,36	0/0:19,0:19:28.84:0,29,196	0/1:10,3:10:7.04:7,0,65	0/1:6,4:11:27.24:27,0,40	0/1:12,7:18:4.24:4,0,57	0/1:16,1:18:39.13:39,0,82	0/1:21,9:31:35.55:36,0,63	0/1:13,7:20:64.94:69,0,65	0/1:31,3:27:38.62:127,0,39	0/1:11,7:16:1.97:71,0,2	1/1:6,0:6:0.73:2,1,0	0/0:10,0:10:14.38:0,14,121	1/1:9,8:18:1.32:80,1,0	1/1:9,5:12:0.87:37,1,0	0/1:19,1:20:5.01:5,0,207	0/1:17,10:27:30.51:172,0,31	0/1:16,6:22:32.35:32,0,108	0/1:4,4:7:6.49:33,0,6
chr10	13523320	.	T	TTTTTTTTG	7125.28	PASS	AB=1.000;AC=39;AF=0.696;AN=56;BaseQRankSum=3.849;DP=565;FS=8.242;HRun=0;HaplotypeScore=163.0531;InbreedingCoeff=0.3334;MQ=46.27;MQ0=24;MQRankSum=-5.238;QD=16.01;ReadPosRankSum=4.584;VQSLOD=3.3349;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:30:69.15:0,69,853	0/1:12,0:11:4.46:242,0,4	1/1:35,0:6:2.75:29,3,0	0/0:40,0:6:3.01:0,3,34	1/1:11,9:23:21.07:329,21,0	1/1:11,0:11:20.88:262,21,0	1/1:13,0:13:4.72:221,5,0	0/1:24,0:22:39.16:106,0,39	1/1:21,0:20:41.90:689,42,0	1/1:19,0:17:37.58:378,38,0	1/1:21,0:19:11.22:315,11,0	0/0:19,0:19:23.01:0,23,360	1/1:13,0:10:20.59:159,21,0	0/1:11,0:11:17.05:179,0,17	1/1:19,0:18:4.45:264,4,0	0/1:17,0:17:5.13:251,0,5	1/1:32,0:32:14.14:489,14,0	1/1:21,0:21:17.94:528,18,0	0/1:34,0:27:18.29:750,0,18	1/1:19,0:17:14.78:165,15,0	1/1:8,0:8:7.12:108,7,0	0/0:10,0:10:26.94:0,27,282	1/1:18,0:18:30.41:405,30,0	0/1:14,0:12:16.44:160,0,16	0/0:20,0:20:52.40:0,52,629	1/1:28,0:28:36.81:641,37,0	0/1:23,0:23:12.25:247,0,12	1/1:8,0:7:15.04:210,15,0
chr10	13523321	.	T	TTTTTTTG	4149.52	PASS	AB=0.990;AC=30;AF=0.536;AN=56;BaseQRankSum=5.740;DP=562;FS=8.436;HRun=0;HaplotypeScore=164.1742;InbreedingCoeff=-0.1291;MQ=46.32;MQ0=23;MQRankSum=-4.518;QD=9.39;ReadPosRankSum=6.740;VQSLOD=0.8911;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:30:69.23:0,69,896	0/1:12,0:11:32.75:145,0,33	0/1:33,0:6:5.41:12,0,5	0/0:40,0:6:3.01:0,3,40	0/1:23,1:23:5.48:252,0,5	1/1:11,0:11:0.93:125,1,0	0/1:12,0:12:3.23:114,0,3	0/1:25,0:23:20.12:20,0,117	1/1:21,0:20:35.62:382,36,0	0/1:19,0:17:1.21:169,0,1	0/1:20,1:19:3.10:197,0,3	0/0:19,0:19:37.90:0,38,440	1/1:13,0:10:3.56:66,4,0	0/1:11,0:11:36.87:75,0,37	0/1:19,1:19:23.84:198,0,24	0/1:17,0:17:25.89:139,0,26	0/1:31,1:32:45.37:379,0,45	1/1:21,0:21:27.74:341,28,0	0/1:33,0:26:82.84:468,0,83	0/1:19,0:17:20.52:68,0,21	1/1:8,0:8:9.10:97,9,0	0/0:10,0:10:26.95:0,27,303	1/1:18,0:18:17.80:313,18,0	0/1:14,0:12:15.52:88,0,16	0/0:20,0:20:56.08:0,56,660	0/1:28,0:28:29.57:282,0,30	0/1:22,0:22:63.26:126,0,63	1/1:8,0:7:14.04:96,14,0
chr10	13523838	.	AATT	A	16395.88	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=9.326;DP=564;FS=9.462;HRun=0;HaplotypeScore=86.1793;InbreedingCoeff=0.9657;MQ=66.28;MQ0=0;MQRankSum=-2.616;QD=35.49;ReadPosRankSum=1.442;VQSLOD=5.2905;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:99:0,99,2010	1/1:0,5:5:15.05:227,15,0	0/0:9,0:8:18.06:0,18,318	0/0:6,0:6:6.22:0,6,221	1/1:3,18:21:48.12:703,48,0	1/1:0,15:15:33.11:518,33,0	1/1:3,20:23:45.15:710,45,0	1/1:3,22:25:65.18:1008,65,0	1/1:1,14:15:33.11:518,33,0	1/1:1,22:23:66.22:1040,66,0	1/1:0,8:8:24.08:380,24,0	0/0:19,0:19:57.20:0,57,1167	1/1:0,17:17:45.15:694,45,0	1/1:1,31:32:13.14:1055,13,0	1/1:0,23:23:54.18:863,54,0	1/1:0,19:19:45.15:709,45,0	1/1:4,37:41:87.08:1308,87,0	1/1:1,19:20:51.13:788,51,0	1/1:1,25:26:75.22:1091,75,0	1/1:4,17:21:51.06:740,51,0	1/1:2,20:22:45.03:676,45,0	0/0:16,0:16:48.16:0,48,1022	1/1:0,26:26:56.93:893,57,0	1/1:0,23:23:30.10:480,30,0	0/0:19,0:19:57.20:0,57,1230	1/1:1,27:28:81.26:1231,81,0	1/1:2,14:16:36.01:525,36,0	1/1:3,10:13:15.05:239,15,0
chr10	13523839	.	ATT	A	8434.04	PASS	AB=1.000;AC=42;AF=0.750;AN=56;BaseQRankSum=12.807;DP=560;FS=9.560;HRun=2;HaplotypeScore=103.0044;InbreedingCoeff=0.7844;MQ=65.50;MQ0=0;MQRankSum=-3.855;QD=18.41;ReadPosRankSum=2.791;VQSLOD=1.9503;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:99:0,99,1738	1/1:5,0:5:14.52:97,15,0	0/0:8,0:7:21.03:0,21,323	0/0:6,0:6:6.21:0,6,201	1/1:20,0:20:29.88:355,30,0	1/1:15,0:15:32.83:258,33,0	0/1:23,0:23:13.36:292,0,13	1/1:24,0:24:46.38:597,46,0	1/1:15,0:15:14.63:237,15,0	1/1:23,0:23:48.90:526,49,0	1/1:8,0:8:23.82:172,24,0	0/0:20,0:20:60.21:0,60,1074	1/1:17,0:17:44.58:381,45,0	1/1:32,0:32:22.36:544,22,0	1/1:23,0:23:53.69:394,54,0	1/1:19,0:19:44.76:344,45,0	1/1:39,2:41:48.42:679,48,0	1/1:20,0:20:50.69:371,51,0	1/1:26,0:26:74.84:727,75,0	1/1:19,1:20:31.76:439,32,0	1/1:21,1:22:31.77:375,32,0	0/0:16,0:16:48.16:0,48,874	1/1:26,0:26:56.62:450,57,0	1/1:23,0:23:29.83:219,30,0	0/0:19,0:19:57.20:0,57,1044	1/1:28,0:28:59.42:590,59,0	1/1:15,1:16:15.41:300,15,0	0/1:12,0:12:17.11:88,0,17
chr10	13528144	.	GC	G	14703.25	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=8.906;DP=640;FS=4.391;HRun=5;HaplotypeScore=80.5088;InbreedingCoeff=0.9990;MQ=74.10;MQ0=0;MQRankSum=-2.372;QD=29.52;ReadPosRankSum=1.705;VQSLOD=5.4421;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,111,1447	1/1:0,13:13:36.10:408,36,0	0/0:12,0:11:28.61:0,29,303	0/0:17,0:16:22.76:0,23,334	1/1:0,26:26:78.18:870,78,0	1/1:1,21:22:60.17:680,60,0	1/1:0,16:16:45.13:510,45,0	1/1:2,31:33:90.22:999,90,0	1/1:2,16:18:42.12:476,42,0	1/1:2,25:27:72.19:808,72,0	1/1:1,22:23:54.15:612,54,0	0/0:25,0:25:72.23:0,72,969	1/1:0,20:20:57.16:646,57,0	1/1:1,24:25:60.17:680,60,0	1/1:1,23:24:60.17:680,60,0	1/1:0,20:20:51.15:578,51,0	1/1:0,27:27:69.20:782,69,0	1/1:0,17:17:30.09:340,30,0	1/1:2,15:17:45.10:498,45,0	1/1:1,30:31:84.24:952,84,0	1/1:0,19:19:54.15:612,54,0	0/0:20,0:20:60.19:0,60,805	1/1:2,24:26:66.18:746,66,0	1/1:1,18:19:45.13:510,45,0	0/0:26,0:26:75.24:0,75,1011	1/1:1,29:30:87.20:954,87,0	1/1:1,32:33:90.24:1019,90,0	1/1:0,12:12:30.09:340,30,0
chr10	13529647	.	TA	T	3674.27	PASS	AB=0.961;AC=46;AF=0.852;AN=54;BaseQRankSum=1.131;DP=343;FS=43.861;HRun=10;HaplotypeScore=53.4394;InbreedingCoeff=0.5271;MQ=71.79;MQ0=38;MQRankSum=0.723;QD=12.41;ReadPosRankSum=1.430;VQSLOD=0.2166;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,1:28:41.21:0,41,620	1/1:1,1:2:6:52,6,0	0/1:37,1:8:11.52:12,0,36	0/1:50,3:19:19.65:20,0,151	1/1:8,3:9:20.78:182,21,0	1/1:1,0:1:3:26,3,0	1/1:5,4:9:23.97:205,24,0	1/1:6,11:16:27.49:324,27,0	1/1:2,2:4:12:104,12,0	1/1:2,4:6:15:130,15,0	1/1:6,11:17:44.99:389,45,0	0/0:5,0:5:15.04:0,15,166	1/1:2,1:3:9:77,9,0	1/1:5,3:7:17.99:156,18,0	1/1:4,1:6:14.37:113,14,0	1/1:5,2:7:14.98:130,15,0	1/1:22,3:22:25.81:255,26,0	1/1:15,7:19:0.34:272,0,0	1/1:8,4:11:21.77:241,22,0	1/1:2,3:5:15:130,15,0	1/1:3,1:4:8.99:78,9,0	./.	1/1:3,4:7:17.99:156,18,0	1/1:2,1:1:3:26,3,0	0/0:10,0:10:27.07:0,27,299	1/1:6,5:9:26.99:235,27,0	1/1:6,5:10:29.99:259,30,0	1/1:8,4:6:12:104,12,0
chr10	13529663	.	C	CA	3502.45	PASS	AB=0.910;AC=45;AF=0.804;AN=56;BaseQRankSum=-1.012;DP=431;FS=7.004;HRun=14;HaplotypeScore=67.5681;InbreedingCoeff=-0.0068;MQ=80.67;MQ0=19;MQRankSum=-1.773;QD=8.22;ReadPosRankSum=1.007;VQSLOD=2.6198;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:27,1:28:21.97:22,0,189	1/1:3,1:4:6:53,6,0	0/1:68,0:21:18.32:18,0,101	0/1:82,0:29:17.06:17,0,82	1/1:7,4:11:12:106,12,0	1/1:1,0:1:3:26,3,0	1/1:7,2:9:18.86:154,19,0	1/1:10,10:20:26.68:223,27,0	1/1:4,0:4:6:53,6,0	1/1:6,4:10:15:132,15,0	1/1:13,6:20:0.47:248,0,0	0/0:5,0:5:5.80:0,6,38	1/1:2,3:5:14.99:130,15,0	1/1:4,6:10:29.97:258,30,0	0/1:5,1:6:4.27:91,0,4	1/1:5,1:6:14.97:126,15,0	1/1:22,4:25:50.98:446,51,0	0/1:20,4:24:0.74:353,0,1	1/1:9,7:16:4.73:166,5,0	1/1:6,1:7:14.95:121,15,0	1/1:3,2:5:8.99:75,9,0	0/1:4,1:5:11.54:12,0,62	0/1:7,1:8:4.28:88,0,4	1/1:0,3:3:6:53,6,0	0/1:9,3:12:51.42:51,0,88	1/1:11,2:14:26.83:222,27,0	1/1:7,5:12:29.98:259,30,0	0/1:5,0:6:0:0,0,0
chr10	13533443	.	C	CTTGT	1450.14	PASS	AB=0.718;AC=3;AF=0.054;AN=56;BaseQRankSum=-6.930;DP=681;FS=5.300;HRun=0;HaplotypeScore=115.1834;InbreedingCoeff=0.6057;MQ=66.28;MQ0=1;MQRankSum=1.302;QD=28.43;ReadPosRankSum=0.319;VQSLOD=3.3232;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:68.69:0,69,1009	0/0:8,0:8:12.04:0,12,192	0/0:17,0:14:10.85:0,11,146	0/0:21,0:19:14.99:0,15,228	0/0:38,0:38:60.18:0,60,908	1/1:7,16:23:42.14:1006,42,0	0/1:17,11:28:19.56:550,0,20	0/0:37,0:39:48.10:0,48,654	0/0:23,0:24:42.11:0,42,626	0/0:31,0:31:63.20:0,63,963	0/0:22,0:24:39.09:0,39,552	0/0:23,0:24:57.17:0,57,865	0/0:10,0:10:21.07:0,21,333	0/0:16,0:16:33.11:0,33,527	0/0:21,0:21:36.11:0,36,552	0/0:23,0:23:45.12:0,45,651	0/0:30,0:30:57.17:0,57,879	0/0:27,0:27:48.15:0,48,742	0/0:20,0:19:18.05:0,18,266	0/0:30,0:30:57.18:0,57,887	0/0:36,0:38:57.18:0,57,858	0/0:14,0:15:33.10:0,33,496	0/0:18,0:18:39.13:0,39,623	0/0:33,0:33:39.21:0,39,906	0/0:28,0:28:51.17:0,51,807	0/0:25,0:25:33.09:0,33,485	0/0:19,0:19:39.13:0,39,598	0/0:15,0:15:18.02:0,18,252
chr10	13534718	.	TC	T	15837.10	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=6.079;DP=574;FS=1.312;HRun=2;HaplotypeScore=56.9145;InbreedingCoeff=0.9992;MQ=63.50;MQ0=1;MQRankSum=2.874;QD=34.13;ReadPosRankSum=2.519;VQSLOD=5.1405;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:63.21:0,63,939	1/1:0,10:10:27.09:350,27,0	0/0:25,0:20:57.18:0,57,791	0/0:23,0:21:63.21:0,63,923	1/1:1,18:19:53.94:620,54,0	1/1:1,25:26:66.21:856,66,0	1/1:0,18:18:45.15:584,45,0	1/1:1,22:23:63.19:792,63,0	1/1:0,21:21:48.16:623,48,0	1/1:0,31:31:93.27:1175,93,0	1/1:0,18:18:51.03:620,51,0	0/0:18,0:18:54.16:0,54,770	1/1:0,28:28:75.24:973,75,0	1/1:0,24:24:60.20:778,60,0	1/1:0,25:25:66.21:857,66,0	1/1:1,21:22:57.18:739,57,0	1/1:0,16:16:48.16:622,48,0	1/1:1,19:20:51.17:661,51,0	1/1:0,8:8:24.07:298,24,0	1/1:0,20:20:60.19:776,60,0	1/1:0,18:18:45.15:584,45,0	0/0:12,0:12:33.11:0,33,494	1/1:1,16:17:39.13:506,39,0	1/1:0,27:27:66.21:856,66,0	0/0:11,0:11:33.09:0,33,457	1/1:0,30:30:84.24:1049,84,0	1/1:0,26:26:72.23:934,72,0	1/1:0,17:17:45.15:583,45,0
chr10	13536433	.	G	GA	3678.47	PASS	AB=0.807;AC=39;AF=0.696;AN=56;BaseQRankSum=-5.877;DP=479;FS=8.299;HRun=14;HaplotypeScore=56.1430;InbreedingCoeff=0.3811;MQ=58.46;MQ0=14;MQRankSum=-1.052;QD=9.04;ReadPosRankSum=0.274;VQSLOD=2.2756;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:14,1:27:5.89:6,0,47	1/1:4,1:7:11.68:81,12,0	0/0:20,1:3:3.84:0,4,13	0/0:15,0:8:8.13:0,8,58	1/1:10,10:21:18.10:289,18,0	1/1:17,4:21:4.38:184,4,0	1/1:6,15:19:17.77:172,18,0	0/1:10,11:21:12.21:192,0,12	0/1:16,1:16:53.50:54,0,87	0/1:16,2:18:4.02:168,0,4	1/1:4,10:14:19.81:163,20,0	0/0:10,0:13:15.90:0,16,48	1/1:10,2:11:4.59:131,5,0	1/1:17,0:16:25.02:162,25,0	0/1:3,9:12:1.40:102,0,1	1/1:13,2:15:19.30:149,19,0	1/1:10,25:34:6.48:298,6,0	1/1:8,11:16:12:105,12,0	1/1:14,5:21:19.16:233,19,0	1/1:2,13:15:16.73:270,17,0	0/1:5,0:4:0.87:14,0,1	0/0:2,0:8:14.35:0,14,48	1/1:2,11:13:27:237,27,0	1/1:4,11:15:14.84:120,15,0	0/0:3,0:13:13.77:0,14,39	1/1:9,8:18:6.87:200,7,0	0/1:9,10:19:38.44:62,0,38	1/1:12,7:20:20.87:287,21,0
chr10	13538349	.	CG	C	674.38	PASS	AC=28;AF=0.875;AN=32;BaseQRankSum=-0.325;DP=86;FS=8.221;HRun=1;HaplotypeScore=26.5549;InbreedingCoeff=0.3014;MQ=96.86;MQ0=5;MQRankSum=-3.505;QD=18.23;ReadPosRankSum=1.385;VQSLOD=3.2396;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,0:2:2.74:12,3,0	1/1:0,1:1:3.01:35,3,0	0/0:24,0:10:7.43:0,7,248	0/0:17,1:6:4.34:0,4,67	./.	1/1:0,2:2:4.26:39,4,0	./.	1/1:0,5:3:9.03:115,9,0	./.	1/1:0,2:2:5.91:56,6,0	1/1:0,1:1:3.01:37,3,0	./.	./.	./.	1/1:0,3:3:6.02:73,6,0	1/1:0,1:1:3.01:32,3,0	1/1:2,5:6:9.02:95,9,0	1/1:1,0:1:2.90:16,3,0	./.	1/1:0,1:1:2.84:14,3,0	./.	./.	1/1:1,1:2:3.01:35,3,0	./.	./.	./.	1/1:0,6:5:12.04:149,12,0	1/1:1,1:2:6.01:67,6,0
chr10	13538919	.	TG	T	2013.09	PASS	AC=40;AF=0.800;AN=50;BaseQRankSum=9.160;DP=186;FS=121.876;HRun=1;HaplotypeScore=82.5089;InbreedingCoeff=0.8102;MQ=80.73;MQ0=4;MQRankSum=-8.592;QD=17.66;ReadPosRankSum=5.292;VQSLOD=-0.0960;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:54.18:0,54,857	1/1:0,3:4:10.52:73,11,0	0/0:22,0:11:30.08:0,30,445	0/0:12,0:8:22.29:0,22,298	1/1:0,12:12:32.76:240,33,0	1/1:0,8:8:23.65:172,24,0	1/1:0,8:8:23.86:176,24,0	1/1:0,7:8:20.82:153,21,0	1/1:0,4:4:11.18:75,11,0	1/1:0,6:6:17.91:136,18,0	1/1:0,5:6:11.93:89,12,0	0/0:9,0:9:24.08:0,24,381	1/1:0,3:3:8.96:68,9,0	1/1:0,2:2:5.97:44,6,0	1/1:0,3:3:8.95:66,9,0	1/1:0,3:3:8.95:67,9,0	1/1:0,7:10:22.45:161,22,0	1/1:1,6:8:17.95:144,18,0	1/1:0,2:2:5.97:45,6,0	1/1:0,9:9:23.84:175,24,0	./.	./.	1/1:0,8:9:22.44:160,22,0	1/1:0,3:5:7.51:47,8,0	0/0:6,0:6:12.04:0,12,192	1/1:0,3:3:8.95:67,9,0	./.	1/1:0,1:1:2.99:24,3,0
chr10	13538921	.	TGC	T	2928.77	PASS	AC=40;AF=0.769;AN=52;BaseQRankSum=9.641;DP=190;FS=100.726;HRun=0;HaplotypeScore=83.5679;InbreedingCoeff=0.8138;MQ=86.40;MQ0=4;MQRankSum=-8.951;QD=25.25;ReadPosRankSum=4.388;VQSLOD=0.6150;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:60.17:0,60,1134	1/1:1,3:4:12.02:116,12,0	0/0:21,0:13:29.19:0,29,553	0/0:13,0:9:27.06:0,27,446	1/1:0,12:12:32.84:303,33,0	1/1:0,8:8:24.01:228,24,0	1/1:0,8:8:24.04:232,24,0	1/1:1,7:8:24.02:229,24,0	1/1:0,4:4:11.96:107,12,0	1/1:0,6:6:18.03:178,18,0	1/1:1,5:6:17.99:162,18,0	0/0:9,0:9:24.08:0,24,486	1/1:0,3:3:9.02:89,9,0	1/1:0,2:2:6.01:58,6,0	1/1:0,3:3:9.01:87,9,0	1/1:0,3:3:9.02:88,9,0	1/1:4,7:11:27.03:257,27,0	1/1:2,7:9:21.02:210,21,0	1/1:0,2:2:6.01:59,6,0	1/1:0,9:9:24:225,24,0	./.	0/0:2,0:2:3:0,3,25	1/1:1,8:9:27:250,27,0	1/1:2,3:5:12:108,12,0	0/0:6,0:6:12.04:0,12,243	1/1:0,3:3:9.01:87,9,0	./.	1/1:0,1:1:3.01:31,3,0
chr10	13538955	.	G	GCC	9699.23	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=0.540;DP=310;FS=29.295;HRun=5;HaplotypeScore=75.2716;InbreedingCoeff=0.9492;MQ=86.46;MQ0=0;MQRankSum=-6.182;QD=41.99;ReadPosRankSum=-1.811;VQSLOD=2.7072;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:66.21:0,66,840	1/1:0,6:6:18.06:314,18,0	0/0:19,0:19:38.27:0,38,417	0/0:12,0:12:21.01:0,21,238	1/1:3,11:15:33.03:510,33,0	1/1:1,10:11:27.09:471,27,0	1/1:7,12:19:33.11:576,33,0	1/1:4,3:7:9.03:155,9,0	1/1:0,6:6:15.05:262,15,0	1/1:1,10:13:36.08:571,36,0	1/1:0,5:5:15.05:262,15,0	0/0:8,0:8:21.07:0,21,267	1/1:0,13:13:39.13:681,39,0	1/1:0,6:6:15.01:230,15,0	1/1:0,6:6:15.05:262,15,0	1/1:0,8:8:24.08:419,24,0	1/1:2,14:16:45.15:786,45,0	1/1:3,10:13:33.11:576,33,0	1/1:3,6:9:18.06:315,18,0	1/1:5,12:17:39.12:652,39,0	1/1:1,6:7:15.05:262,15,0	0/0:5,0:5:15.05:0,15,191	1/1:0,14:14:39.13:678,39,0	1/1:1,15:16:39.09:649,39,0	0/0:11,0:11:30.09:0,30,382	1/1:0,12:13:39.11:649,39,0	1/1:0,5:5:15.05:262,15,0	1/1:2,4:6:9.03:157,9,0
chr10	13542204	.	CT	C	15511.42	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=7.836;DP=711;FS=21.972;HRun=2;HaplotypeScore=66.8434;InbreedingCoeff=0.9986;MQ=49.29;MQ0=5;MQRankSum=-2.067;QD=28.99;ReadPosRankSum=3.057;VQSLOD=3.2382;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,120,1795	1/1:0,22:22:51.17:662,51,0	0/0:23,1:19:48.12:0,48,653	0/0:26,1:20:54.13:0,54,736	1/1:0,19:19:42.14:545,42,0	1/1:0,27:27:60.18:764,60,0	1/1:1,20:18:42.11:527,42,0	1/1:2,15:16:42.10:515,42,0	1/1:0,25:25:57.17:726,57,0	1/1:0,25:25:69.21:882,69,0	1/1:0,17:17:33.11:428,33,0	0/0:25,0:25:72.24:0,72,1079	1/1:0,26:26:57.18:736,57,0	1/1:1,34:35:63.20:817,63,0	1/1:1,33:34:63.20:817,63,0	1/1:1,38:39:93.30:1207,93,0	1/1:1,17:18:24.08:311,24,0	1/1:1,15:14:39.13:504,39,0	1/1:2,13:14:39.13:506,39,0	1/1:0,36:36:84.27:1089,84,0	1/1:0,27:27:69.18:895,69,0	0/0:28,0:28:81.27:0,81,1207	1/1:1,16:17:36.12:467,36,0	1/1:1,14:15:24.08:311,24,0	0/0:26,0:26:78.26:0,78,1169	1/1:1,36:35:99:1362,105,0	1/1:0,37:37:87.28:1128,87,0	1/1:0,10:10:24.08:312,24,0
chr10	13544359	.	T	TAA	16631.29	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-11.641;DP=664;FS=2.238;HRun=9;HaplotypeScore=81.4855;InbreedingCoeff=0.9961;MQ=75.31;MQ0=5;MQRankSum=-4.278;QD=32.48;ReadPosRankSum=1.101;VQSLOD=5.1638;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:34:98.84:0,99,992	1/1:3,7:10:24.02:320,24,0	0/0:36,0:26:57.38:0,57,569	0/0:25,0:23:38.52:0,39,373	1/1:11,22:36:68.95:926,69,0	1/1:1,19:20:57.19:878,57,0	1/1:3,18:22:47.65:701,48,0	1/1:8,12:21:39.12:565,39,0	1/1:2,21:23:45.15:688,45,0	1/1:3,19:23:56.68:838,57,0	1/1:6,23:30:75.16:1072,75,0	0/0:17,0:17:42.09:0,42,447	1/1:1,16:17:42.14:647,42,0	1/1:2,24:28:68.72:1016,69,0	1/1:2,20:25:54.68:719,55,0	1/1:0,21:23:53.66:766,54,0	1/1:4,28:34:69.23:1062,69,0	1/1:2,23:25:45.15:693,45,0	1/1:3,17:21:59.63:816,60,0	1/1:4,26:30:74.19:1023,74,0	1/1:2,12:17:28.56:483,29,0	0/0:15,0:15:34.89:0,35,356	1/1:0,15:15:39.09:563,39,0	1/1:5,15:20:36.12:554,36,0	0/0:24,0:24:69.17:0,69,734	1/1:2,30:32:87.19:1248,87,0	1/1:2,27:30:54.05:823,54,0	1/1:0,6:6:15.05:231,15,0
chr10	13545334	.	C	CA	2558.28	PASS	AB=0.828;AC=38;AF=0.679;AN=56;BaseQRankSum=0.906;DP=553;FS=7.373;HRun=16;HaplotypeScore=90.4262;InbreedingCoeff=-0.1464;MQ=69.81;MQ0=5;MQRankSum=-1.685;QD=5.08;ReadPosRankSum=-3.610;VQSLOD=1.0946;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:28,1:29:54.51:55,0,108	0/1:5,1:10:9.67:78,0,10	0/0:31,0:15:5.62:0,6,31	0/0:18,0:7:1.39:0,1,16	1/1:9,5:22:13.60:165,14,0	0/1:17,2:21:14.74:15,0,107	0/1:12,1:14:19.76:20,0,80	1/1:15,4:28:15.86:207,16,0	1/1:9,4:14:25.37:166,25,0	1/1:16,4:23:36.49:228,36,0	1/1:3,3:16:7.61:114,8,0	0/1:13,0:14:15.90:16,0,62	0/1:2,1:9:7.92:29,0,8	1/1:5,2:20:16.66:105,17,0	1/1:7,18:25:12.85:185,13,0	0/1:7,8:15:4.33:60,0,4	1/1:6,2:20:14.36:80,14,0	0/1:19,3:25:6.98:151,0,7	0/1:10,7:17:23.44:105,0,23	0/1:10,2:13:19.67:110,0,20	0/1:12,3:17:23.84:158,0,24	0/1:14,2:15:36.16:43,0,36	1/1:5,3:20:19.11:117,19,0	1/1:6,2:21:10.60:74,11,0	0/1:13,1:20:43.33:43,0,57	1/1:8,20:28:40.82:252,41,0	1/1:9,0:35:26.16:137,26,0	0/1:9,0:9:0:0,0,0
chr10	13545924	.	ACACG	A	1983	PASS	AB=0.951;AC=31;AF=0.554;AN=56;BaseQRankSum=2.572;DP=417;FS=3.185;HRun=0;HaplotypeScore=86.8842;InbreedingCoeff=0.2591;MQ=62.75;MQ0=6;MQRankSum=2.998;QD=6.81;ReadPosRankSum=-3.910;VQSLOD=1.1362;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:69.07:0,69,1496	0/1:6,1:7:42.43:49,0,42	0/1:28,0:12:27.05:27,0,229	0/1:22,0:12:58.55:72,0,59	1/1:11,2:13:1.36:53,1,0	1/1:12,2:14:4.76:110,5,0	0/0:8,0:7:2.36:0,2,4	1/1:33,2:35:33:446,33,0	1/1:6,1:7:1.72:53,2,0	0/1:13,1:14:16.27:152,0,16	0/0:13,0:13:2.36:0,2,4	0/0:5,0:5:15.02:0,15,339	1/1:10,1:11:5.73:64,6,0	1/1:8,0:8:1.73:22,2,0	1/1:8,1:9:14.36:154,14,0	1/1:8,1:9:1.65:54,2,0	1/1:30,2:32:0.50:100,1,0	0/1:17,1:18:13.53:49,0,14	1/1:13,2:13:2.79:214,3,0	0/0:24,0:24:4.71:0,5,8	1/1:12,1:13:1.05:3,1,0	0/0:11,0:11:32.29:0,32,751	0/0:9,0:9:1.62:0,2,3	0/0:5,0:5:1.41:0,1,2	0/0:8,0:8:24.01:0,24,525	1/1:16,2:18:35.05:373,35,0	1/1:16,2:17:5.68:145,6,0	0/0:18,0:18:1.89:0,2,4
chr10	13545926	.	ACG	A	7497.59	PASS	AB=0.861;AC=45;AF=0.804;AN=56;BaseQRankSum=7.248;DP=415;FS=5.149;HRun=0;HaplotypeScore=56.3751;InbreedingCoeff=0.5565;MQ=63.27;MQ0=6;MQRankSum=2.439;QD=20.60;ReadPosRankSum=-0.932;VQSLOD=4.0291;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:23.58:0,24,955	0/1:2,5:7:6.22:144,0,6	0/1:30,0:13:40.73:41,0,102	0/1:22,0:11:20.41:78,0,20	1/1:2,11:13:18.03:251,18,0	1/1:2,12:14:18.01:227,18,0	1/1:1,7:7:15.05:229,15,0	1/1:3,31:34:93.09:1070,93,0	1/1:1,6:7:15.02:205,15,0	1/1:1,13:14:41.99:463,42,0	1/1:0,13:13:15.05:229,15,0	0/0:6,0:6:1.22:0,1,218	1/1:1,10:11:15.02:205,15,0	1/1:1,7:8:15.04:208,15,0	1/1:7,2:9:23.98:237,24,0	1/1:1,8:9:14.99:205,15,0	1/1:3,29:32:54.13:775,54,0	1/1:2,15:17:25.61:341,26,0	1/1:11,3:12:35.90:352,36,0	1/1:0,24:24:33.11:503,33,0	1/1:1,12:13:12.04:183,12,0	0/0:11,0:11:32.29:0,32,542	1/1:0,9:9:12.04:183,12,0	1/1:0,5:5:9.03:137,9,0	0/0:9,0:9:8.29:0,8,349	1/1:2,14:16:47.97:495,48,0	1/1:2,15:17:36.09:508,36,0	1/1:1,17:18:15.05:228,15,0
chr10	13545928	.	GCA	G	2673.36	PASS	AB=0.946;AC=44;AF=0.815;AN=54;BaseQRankSum=9.526;DP=423;FS=0.000;HRun=0;HaplotypeScore=74.5504;InbreedingCoeff=0.2124;MQ=62.75;MQ0=6;MQRankSum=1.857;QD=7.43;ReadPosRankSum=1.413;VQSLOD=3.0530;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:24,3:27:46.77:47,0,774	0/1:7,0:7:31.58:59,0,32	0/0:30,0:12:9.01:0,9,114	./.	1/1:13,0:13:17.57:116,18,0	1/1:14,0:14:17.26:105,17,0	0/1:11,0:10:6.08:85,0,6	1/1:34,0:34:45.71:279,46,0	1/1:7,0:7:14.58:94,15,0	1/1:14,0:14:20.28:120,20,0	1/1:13,0:13:14.89:105,15,0	0/1:6,1:7:15.62:16,0,237	1/1:11,0:11:14.58:94,15,0	1/1:7,0:7:11.91:84,12,0	1/1:8,0:8:8.07:51,8,0	1/1:10,0:10:14.55:94,15,0	1/1:32,0:32:53.02:360,53,0	1/1:18,0:18:9.89:140,10,0	1/1:13,0:12:9.39:69,9,0	1/1:24,0:24:32.74:228,33,0	1/1:13,0:13:11.91:84,12,0	0/0:11,0:11:27.09:0,27,432	1/1:9,0:9:11.91:85,12,0	1/1:5,0:5:8.94:64,9,0	0/1:8,1:9:15.54:16,0,271	1/1:16,0:16:22.80:127,23,0	1/1:18,0:17:14.26:221,14,0	0/1:20,0:20:23.02:87,0,23
chr10	13547172	.	GAAA	G	8013.27	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-1.430;DP=563;FS=43.896;HRun=14;HaplotypeScore=90.5808;InbreedingCoeff=0.9162;MQ=64.71;MQ0=7;MQRankSum=-1.887;QD=19.17;ReadPosRankSum=4.047;VQSLOD=0.5110;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:33:75.91:0,76,1152	1/1:2,6:8:14.99:175,15,0	0/0:38,0:13:22.71:0,23,216	0/0:35,0:17:30.47:0,30,367	1/1:0,18:19:43.12:454,43,0	1/1:6,12:19:16.05:381,16,0	1/1:4,6:9:12.01:140,12,0	1/1:11,26:37:43.62:747,44,0	1/1:1,9:12:10.50:120,10,0	1/1:6,17:23:5.33:429,5,0	1/1:1,17:18:39.62:386,40,0	0/0:15,0:15:37.57:0,38,557	1/1:2,5:8:16.60:204,17,0	1/1:3,12:17:25.52:293,26,0	1/1:7,13:20:29.45:379,29,0	1/1:2,14:16:30.09:351,30,0	1/1:3,20:23:45.11:526,45,0	1/1:6,22:30:46.49:524,46,0	1/1:7,17:24:46.66:547,47,0	1/1:5,9:14:13.75:173,14,0	1/1:4,14:18:9.01:198,9,0	0/0:7,0:7:21:0,21,350	1/1:6,12:19:19.66:266,20,0	1/1:5,12:17:32.96:365,33,0	0/0:14,0:14:33.06:0,33,547	1/1:4,24:29:60.26:701,60,0	1/1:5,25:30:53.39:584,53,0	1/1:0,3:3:6.02:70,6,0
chr10	13547771	.	G	GATTT	332.47	PASS	AC=2;AF=0.050;AN=40;BaseQRankSum=-4.032;DP=241;FS=1.705;HRun=0;HaplotypeScore=37.1109;InbreedingCoeff=0.2637;MQ=56.02;MQ0=4;MQRankSum=-0.724;QD=18.47;ReadPosRankSum=-1.719;VQSLOD=2.3854;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:15.03:0,15,206	0/0:4,0:4:6.02:0,6,92	./.	./.	./.	0/0:4,0:8:12.01:0,12,112	0/0:4,0:5:3:0,3,27	./.	./.	./.	0/0:13,0:13:18.06:0,18,275	0/0:2,0:2:3.01:0,3,46	0/0:5,0:5:6.02:0,6,90	./.	0/0:7,0:7:6.02:0,6,92	0/0:5,0:5:3.01:0,3,46	0/0:24,0:23:36.12:0,36,550	1/1:8,8:18:18.06:419,18,0	0/0:12,0:12:9.03:0,9,138	0/0:7,0:7:6.02:0,6,92	0/0:5,0:5:3.01:0,3,46	./.	0/0:4,0:4:3.01:0,3,46	0/0:0,0:1:3:0,3,28	0/0:14,0:14:9.03:0,9,138	0/0:2,0:2:6.02:0,6,92	0/0:10,0:10:9.02:0,9,117	0/0:22,0:20:30.10:0,30,459
chr10	13548524	.	A	ACTT	9231.18	PASS	AB=1.000;AC=42;AF=0.750;AN=56;BaseQRankSum=8.950;DP=331;FS=5.255;HRun=0;HaplotypeScore=187.4964;InbreedingCoeff=0.7926;MQ=72.78;MQ0=7;MQRankSum=-10.484;QD=43.75;ReadPosRankSum=2.311;VQSLOD=6.0948;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:90.25:0,90,1564	1/1:10,0:10:30.06:484,30,0	0/0:21,0:11:12.18:0,12,307	0/0:17,0:11:23.99:0,24,316	1/1:7,4:11:22.78:360,23,0	1/1:11,0:11:30.06:500,30,0	1/1:7,0:7:21.07:382,21,0	1/1:17,0:16:43.02:621,43,0	1/1:13,0:13:36.11:632,36,0	1/1:8,0:8:24.08:426,24,0	1/1:9,0:9:26.98:435,27,0	0/0:14,0:14:33.11:0,33,610	1/1:3,0:3:9.03:155,9,0	1/1:12,0:12:33.11:583,33,0	1/1:9,0:9:24.05:413,24,0	1/1:10,0:10:30.10:541,30,0	1/1:6,0:6:8.41:140,8,0	1/1:4,0:3:6:121,6,0	1/1:6,0:5:15.03:220,15,0	1/1:12,0:12:33.10:584,33,0	0/1:6,0:5:8.87:98,0,9	0/0:17,0:17:42.14:0,42,721	1/1:11,0:11:33.06:516,33,0	1/1:7,0:6:14.87:217,15,0	0/0:14,0:14:39.13:0,39,679	0/1:18,0:18:3.72:768,0,4	1/1:13,0:13:39.10:663,39,0	1/1:7,0:7:21.07:373,21,0
chr10	13550193	.	G	GGTGT	13387.22	PASS	AB=0.656;AC=40;AF=0.714;AN=56;BaseQRankSum=-7.283;DP=657;FS=2.200;HRun=0;HaplotypeScore=114.6804;InbreedingCoeff=0.5636;MQ=63.44;MQ0=7;MQRankSum=-0.402;QD=27.83;ReadPosRankSum=-3.258;VQSLOD=3.9788;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:45:77.67:0,78,1277	1/1:4,5:9:12.02:278,12,0	0/0:35,0:11:0.03:0,0,29	0/0:40,0:23:9.30:0,9,110	0/1:13,6:23:76.18:218,0,76	1/1:17,0:25:13.21:214,13,0	1/1:10,2:20:17.53:244,18,0	1/1:16,5:23:31.93:540,32,0	1/1:9,6:20:20.17:376,20,0	1/1:9,11:22:41.61:882,42,0	1/1:9,6:17:11.77:229,12,0	0/0:21,0:23:54.15:0,54,785	1/1:9,12:24:44.62:966,45,0	1/1:5,6:15:29.57:587,30,0	1/1:9,8:18:21.07:507,21,0	0/1:5,9:18:9.72:433,0,10	1/1:7,20:29:23.76:1062,24,0	1/1:10,16:28:44.89:991,45,0	1/1:8,6:14:18.06:402,18,0	1/1:3,12:19:26.83:585,27,0	0/1:23,29:55:35.16:1378,0,35	0/0:16,0:16:30.10:0,30,482	0/1:9,7:17:49.34:480,0,49	1/1:8,20:30:57.20:1377,57,0	0/0:15,0:17:36.12:0,36,561	1/1:12,11:27:50.99:961,51,0	1/1:8,10:21:27.03:530,27,0	1/1:3,4:7:6.02:145,6,0
chr10	13551582	.	C	CGG	1665.59	PASS	AB=0.615;AC=37;AF=0.712;AN=52;BaseQRankSum=-1.671;DP=222;FS=9.713;HRun=9;HaplotypeScore=41.0834;InbreedingCoeff=0.5243;MQ=86.27;MQ0=0;MQRankSum=-1.818;QD=12.34;ReadPosRankSum=-0.422;VQSLOD=-0.0893;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:50.70:0,51,493	1/1:2,1:4:8.50:79,8,0	0/0:16,0:12:29.53:0,30,273	0/0:18,0:19:11.63:0,12,175	1/1:2,5:7:6.02:92,6,0	1/1:9,0:11:2.01:8,2,0	0/1:3,0:17:36.49:36,0,40	1/1:1,5:7:15.02:186,15,0	1/1:0,5:5:9.03:138,9,0	1/1:3,2:9:16.86:175,17,0	0/1:3,0:8:0:0,0,0	0/0:8,0:8:11.78:0,12,147	1/1:2,3:5:6.02:92,6,0	1/1:2,2:4:5.87:92,6,0	1/1:2,3:6:4.83:51,5,0	1/1:1,1:2:3.01:46,3,0	1/1:7,4:11:10.59:142,11,0	1/1:5,1:8:17.02:168,17,0	1/1:1,3:4:9.03:138,9,0	./.	1/1:1,0:4:2.37:8,2,0	0/0:7,0:7:14.78:0,15,129	1/1:3,2:5:3.90:48,4,0	1/1:2,0:2:3:27,3,0	0/0:13,0:13:35.95:0,36,359	./.	0/1:8,6:15:6.62:280,0,7	1/1:1,0:1:3:26,3,0
chr10	13552648	.	AT	A	3824.21	PASS	AB=0.694;AC=44;AF=0.786;AN=56;BaseQRankSum=3.886;DP=391;FS=18.468;HRun=13;HaplotypeScore=47.8778;InbreedingCoeff=0.5207;MQ=72.45;MQ0=3;MQRankSum=-1.556;QD=11.77;ReadPosRankSum=3.423;VQSLOD=1.4828;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,3:28:18.45:0,18,489	1/1:3,3:6:8.90:66,9,0	0/0:14,0:11:11.96:0,12,99	0/0:13,0:8:9.87:0,10,73	0/1:6,8:14:35.56:70,0,36	1/1:2,13:15:35.71:254,36,0	1/1:4,11:15:22.89:159,23,0	1/1:8,17:25:17.50:278,17,0	1/1:3,9:12:26.83:197,27,0	1/1:5,8:14:25.85:181,26,0	1/1:4,5:9:11.84:83,12,0	0/0:9,0:11:21.03:0,21,204	1/1:6,11:17:29.75:215,30,0	1/1:3,9:11:17.88:131,18,0	1/1:4,12:16:29.77:215,30,0	1/1:2,6:8:8.94:66,9,0	1/1:2,25:29:60.74:428,61,0	1/1:3,12:16:5.63:196,6,0	1/1:3,3:6:8.92:64,9,0	1/1:4,9:13:23.79:175,24,0	1/1:4,3:7:10.98:71,11,0	0/1:5,2:7:28.80:29,0,68	0/1:2,9:11:3.36:110,0,3	1/1:2,17:21:23.95:293,24,0	0/1:10,3:12:16.92:17,0,159	1/1:6,10:15:26.76:193,27,0	1/1:3,7:9:19.92:137,20,0	1/1:3,8:11:26.84:197,27,0
chr10	13555231	.	ATGTG	A	4234.77	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=7.384;DP=1416;FS=11.460;HRun=0;HaplotypeScore=398.0891;InbreedingCoeff=0.9608;MQ=48.31;MQ0=28;MQRankSum=3.289;QD=24.06;ReadPosRankSum=0.283;VQSLOD=3.4859;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:61,0:61:99:0,138,2860	0/0:20,0:19:29.94:0,30,570	0/0:47,0:7:15.05:0,15,230	0/0:59,0:15:29.83:0,30,406	0/0:54,0:54:91.90:0,92,1895	0/0:31,0:30:50.58:0,51,1043	0/0:49,0:45:70.24:0,70,1551	0/0:77,0:67:99:0,120,2123	0/0:61,0:61:99:0,108,2082	0/0:74,0:69:99:0,161,3261	0/0:40,0:39:45.83:0,46,1161	0/0:51,0:51:99:0,124,2812	1/1:34,19:52:26.30:1292,26,0	1/1:37,15:52:5.57:1331,6,0	0/0:76,0:75:99:0,165,3493	0/0:68,0:66:99:0,128,2680	0/0:34,0:33:72.56:0,73,1407	0/0:34,0:34:59.12:0,59,1345	0/0:29,0:19:40.63:0,41,661	0/0:47,0:45:35.83:0,36,1274	0/0:128,0:123:99:0,158,3698	0/0:41,0:41:99:0,102,2175	1/1:23,12:35:19.52:764,20,0	1/1:19,17:35:51.95:847,52,0	0/0:34,0:33:60.30:0,60,1387	0/0:60,0:58:99:0,129,2521	0/0:44,0:43:95.45:0,95,2202	0/0:20,0:18:51.10:0,51,1142
chr10	13555252	.	AGT	A	1736.01	PASS	AB=0.864;AC=15;AF=0.268;AN=56;BaseQRankSum=9.900;DP=1573;FS=51.796;HRun=0;HaplotypeScore=447.7373;InbreedingCoeff=-0.3860;MQ=43.79;MQ0=107;MQRankSum=-9.251;QD=1.90;ReadPosRankSum=-0.348;VQSLOD=-0.3962;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:56:99:0,121,1997	0/0:16,1:15:4.77:0,5,251	0/0:62,0:5:5.93:0,6,40	0/0:74,0:9:8.57:0,9,62	0/1:42,10:49:99:144,0,774	0/0:32,3:33:34.22:0,34,758	0/1:49,8:48:99:134,0,934	0/1:73,8:60:99:184,0,1511	0/1:53,13:63:21.10:21,0,1243	0/1:75,10:71:99:311,0,1923	0/1:33,10:42:99:162,0,637	0/0:53,0:53:96.11:0,96,1965	0/1:55,8:62:99:120,0,1595	0/0:57,5:61:8.78:0,9,1471	0/0:69,10:76:90.57:0,91,1953	0/0:61,9:66:59.11:0,59,1671	0/1:36,2:38:25.09:25,0,1019	0/1:35,7:42:99:181,0,1054	0/1:34,3:28:49.97:50,0,713	0/1:40,9:44:99:171,0,698	0/1:126,23:137:26.06:26,0,2263	0/0:41,0:40:96.30:0,96,1606	0/1:26,14:38:74.81:75,0,755	0/1:37,5:39:10.49:10,0,588	0/0:43,0:41:72.55:0,73,1189	0/1:56,13:60:99:278,0,1709	0/0:42,4:44:39.33:0,39,1200	0/0:19,1:17:38.48:0,38,576
chr10	13555320	.	GTGTA	G	28048.39	PASS	AB=0.639;AC=31;AF=0.554;AN=56;BaseQRankSum=3.034;DP=1296;FS=43.033;HRun=0;HaplotypeScore=426.7045;InbreedingCoeff=0.0688;MQ=45.09;MQ0=39;MQRankSum=0.687;QD=27.69;ReadPosRankSum=11.298;VQSLOD=2.9990;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:67,0:65:99:0,178,4589	0/1:6,9:14:3.18:325,0,3	0/0:45,0:24:69.70:0,70,1584	0/0:39,0:21:60.20:0,60,1347	0/1:12,20:28:99:763,0,106	0/1:15,12:25:38.65:554,0,39	1/1:20,22:41:32.97:1264,33,0	0/1:42,34:66:99:1302,0,708	0/1:28,43:68:55.17:1861,0,55	0/1:23,26:42:99:1369,0,242	0/1:17,12:28:99:477,0,191	0/0:56,0:56:99:0,142,3515	0/1:31,34:65:44.38:1942,0,44	1/1:14,44:57:59.64:1819,60,0	1/1:25,37:60:77.08:2017,77,0	1/1:22,36:57:99:2430,127,0	0/1:6,28:34:11.75:1037,0,12	0/1:15,30:45:99:1218,0,198	1/1:12,21:26:8.47:1022,8,0	0/1:11,25:32:99:752,0,216	0/1:59,55:110:99:2272,0,143	0/0:39,0:38:72.25:0,72,1892	1/1:10,12:22:8.09:851,8,0	1/1:14,47:59:85.21:1661,85,0	0/0:37,0:36:55.47:0,55,1483	0/1:16,22:37:99:1291,0,189	1/1:8,23:31:63.96:1373,64,0	1/1:3,11:13:27.06:448,27,0
chr10	13555325	.	TGAGC	T	20217.09	PASS	AB=0.945;AC=43;AF=0.768;AN=56;BaseQRankSum=17.263;DP=1230;FS=4.701;HRun=0;HaplotypeScore=438.3166;InbreedingCoeff=0.6889;MQ=45.39;MQ0=31;MQRankSum=-0.560;QD=20.42;ReadPosRankSum=7.885;VQSLOD=3.7986;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:63,0:62:99:0,169,4516	1/1:13,1:13:24.07:293,24,0	0/0:47,0:24:71.84:0,72,1562	0/0:41,0:24:66.21:0,66,1623	1/1:30,1:29:50.40:553,50,0	1/1:22,3:24:39.10:500,39,0	1/1:39,3:41:26.50:947,26,0	0/1:67,4:60:99:972,0,410	1/1:65,2:66:99:1398,122,0	1/1:41,2:39:51.37:964,51,0	0/1:28,1:28:17.14:401,0,17	0/0:51,1:52:10.15:0,10,3415	1/1:50,6:56:99:1623,133,0	1/1:53,2:54:99:1239,105,0	1/1:57,4:58:99:1395,117,0	1/1:50,4:55:94.65:1496,95,0	1/1:32,1:34:70.95:815,71,0	1/1:41,1:44:44.93:949,45,0	1/1:28,0:24:16.35:578,16,0	1/1:33,0:29:32.32:582,32,0	1/1:96,5:101:99:1477,119,0	0/0:37,0:36:58.07:0,58,1750	1/1:21,1:22:54.12:658,54,0	1/1:56,3:59:73.53:1035,74,0	0/1:33,2:35:21.52:22,0,1295	1/1:34,2:35:65.48:988,65,0	1/1:27,1:28:75.22:962,75,0	1/1:14,0:13:27.09:373,27,0
chr10	13555382	.	A	ATG	13304.50	PASS	AB=0.821;AC=26;AF=0.464;AN=56;BaseQRankSum=1.281;DP=1999;FS=26.980;HRun=0;HaplotypeScore=566.1494;InbreedingCoeff=-0.8464;MQ=43.81;MQ0=28;MQRankSum=-10.473;QD=7.02;ReadPosRankSum=-7.186;VQSLOD=2.0116;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:63,9:71:99:233,0,1644	0/1:20,3:22:2.53:3,0,515	0/0:50,1:9:15.60:0,16,132	0/0:52,0:17:28.04:0,28,280	0/1:38,10:48:99:268,0,657	0/1:25,14:36:99:377,0,520	0/1:54,19:70:99:753,0,1055	0/1:89,15:91:99:685,0,1543	0/1:70,23:90:99:735,0,1405	0/1:93,28:115:99:1123,0,2195	0/1:47,14:61:99:276,0,1081	0/1:65,10:75:99:158,0,2020	0/1:53,27:76:99:978,0,1084	0/1:49,17:65:99:633,0,1097	0/1:92,30:114:99:965,0,1961	0/1:57,36:86:99:1296,0,1186	0/1:38,11:49:99:461,0,802	0/1:47,8:55:99:375,0,1086	0/1:34,6:27:99:277,0,457	0/1:51,13:64:99:353,0,1250	0/1:153,50:193:99:853,0,3159	0/1:45,8:54:99:128,0,725	0/1:49,9:58:99:129,0,1188	0/1:65,17:81:99:506,0,1077	0/1:42,8:50:99:236,0,1080	0/1:63,23:76:99:909,0,1417	0/1:35,18:51:99:454,0,881	0/1:22,5:27:99:142,0,528
chr10	13555530	.	ATG	A	5152.32	PASS	AB=0.834;AC=22;AF=0.393;AN=56;BaseQRankSum=0.406;DP=1524;FS=33.021;HRun=0;HaplotypeScore=646.3899;InbreedingCoeff=-0.6473;MQ=33.96;MQ0=30;MQRankSum=0.169;QD=4.36;ReadPosRankSum=5.765;VQSLOD=0.0245;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:59,0:59:70.50:0,70,1089	0/1:22,9:29:99:214,0,179	0/0:48,0:15:33.11:0,33,539	0/0:40,0:10:24.04:0,24,345	0/1:43,11:52:99:165,0,167	0/1:27,7:30:99:112,0,121	0/1:48,7:45:58.55:59,0,283	0/1:64,15:56:99:426,0,601	0/1:56,9:61:43.30:259,0,43	0/1:92,14:103:99:372,0,1502	0/1:34,11:43:99:195,0,217	0/0:61,0:61:99:0,127,1947	0/1:35,15:46:99:418,0,293	0/1:35,7:38:60.82:97,0,61	0/1:48,19:59:66.19:329,0,66	0/1:49,15:56:62.97:248,0,63	0/1:24,4:28:99:125,0,164	0/1:26,4:30:99:134,0,351	0/1:33,5:28:99:227,0,263	0/1:35,16:51:99:366,0,404	0/1:84,18:91:99:311,0,410	0/0:72,0:72:58.74:0,59,1326	0/1:40,6:46:99:149,0,192	0/1:32,10:42:51.84:85,0,52	0/0:61,0:61:87.68:0,88,1266	0/1:65,21:73:99:435,0,847	0/1:37,12:45:99:247,0,120	0/1:15,3:17:86.75:180,0,87
chr10	13555545	.	TGTGA	T	7822.91	PASS	AB=0.911;AC=23;AF=0.411;AN=56;BaseQRankSum=15.068;DP=1366;FS=71.985;HRun=0;HaplotypeScore=625.8509;InbreedingCoeff=-0.7009;MQ=31.52;MQ0=87;MQRankSum=-10.344;QD=6.78;ReadPosRankSum=4.483;VQSLOD=-0.1657;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,1:35:39.29:0,39,1327	0/1:16,13:27:99:397,0,155	0/0:48,0:11:32.92:0,33,590	0/0:46,0:7:11.22:0,11,373	0/1:43,8:49:99:150,0,182	0/1:25,2:23:99:196,0,151	0/1:41,7:35:99:348,0,279	0/1:78,0:53:99:225,0,1774	0/1:45,2:40:71:293,0,71	0/1:88,17:91:99:1431,0,1900	0/1:38,5:40:90.35:90,0,405	0/0:56,0:56:31.65:0,32,2605	0/1:47,1:44:99:365,0,578	0/1:40,0:36:63.21:63,0,146	0/1:55,4:50:99:310,0,171	0/1:48,7:46:99:333,0,187	0/1:24,0:23:99:131,0,637	0/1:22,2:23:99:368,0,523	0/1:30,1:18:99:141,0,404	0/1:44,7:50:99:417,0,540	0/1:77,7:71:99:261,0,643	0/1:73,1:72:99:361,0,1786	0/1:31,12:41:99:337,0,163	0/0:25,3:28:22.56:0,23,319	0/1:55,2:57:99:203,0,1632	0/1:71,7:60:99:805,0,1330	0/1:39,6:42:99:426,0,280	0/1:10,2:11:99:171,0,151
chr10	13555549	.	AGT	A	4808.31	PASS	AB=0.829;AC=22;AF=0.393;AN=56;BaseQRankSum=9.194;DP=1414;FS=117.144;HRun=0;HaplotypeScore=643.5578;InbreedingCoeff=-0.6708;MQ=30.86;MQ0=97;MQRankSum=-7.750;QD=4.21;ReadPosRankSum=0.374;VQSLOD=-0.2733;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:29.10:0,29,806	0/1:24,8:30:63.88:246,0,64	0/0:48,0:10:15.05:0,15,250	0/0:47,0:6:15.01:0,15,218	0/1:41,13:52:93.13:93,0,119	0/1:20,7:23:99:123,0,124	0/1:43,10:39:99:129,0,292	0/1:72,13:55:99:301,0,1065	0/1:35,13:40:47.64:384,0,48	0/1:95,12:95:99:577,0,1294	0/1:37,11:44:65.09:65,0,268	0/0:58,0:58:27.82:0,28,1601	0/1:30,15:42:99:417,0,427	0/1:31,10:37:98.26:105,0,98	0/1:37,22:49:99:303,0,122	0/1:43,14:48:99:239,0,200	0/1:20,5:24:83.43:83,0,370	0/1:17,6:23:99:235,0,297	0/1:28,5:20:99:208,0,213	0/1:43,12:53:99:284,0,273	0/1:70,15:74:45.64:46,0,364	0/1:75,0:72:69.60:70,0,1108	0/1:35,6:39:99:104,0,109	0/0:23,7:30:16.93:0,17,198	0/0:57,0:57:1.79:0,2,1027	0/1:59,22:62:99:489,0,838	0/1:38,7:42:99:225,0,227	0/1:13,2:14:82.72:83,0,102
chr10	13555586	.	AATGT	A	8348.06	PASS	AB=0.862;AC=25;AF=0.481;AN=52;BaseQRankSum=14.975;DP=1396;FS=9.054;HRun=0;HaplotypeScore=665.5526;InbreedingCoeff=-0.9265;MQ=28.35;MQ0=163;MQRankSum=-5.406;QD=6.48;ReadPosRankSum=1.288;VQSLOD=-0.5544;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:27,2:30:99:120,0,796	0/1:24,2:23:93.80:94,0,612	./.	./.	0/1:41,9:47:99:193,0,647	0/1:26,3:25:96.15:96,0,853	0/1:44,10:39:99:326,0,775	0/1:85,6:69:99:611,0,2292	0/1:43,9:45:99:368,0,1434	0/1:99,23:100:99:977,0,3413	0/1:42,4:41:99:136,0,804	0/1:51,0:50:33.56:34,0,1870	0/1:45,9:49:99:406,0,1433	0/1:40,6:41:99:231,0,1481	0/1:46,18:54:99:662,0,1110	0/1:45,20:56:99:783,0,1355	0/1:16,5:20:99:227,0,567	0/1:18,1:18:99:118,0,421	0/1:38,6:26:99:295,0,915	0/1:43,11:51:99:271,0,1035	0/1:61,14:58:99:260,0,893	0/1:67,0:64:47.52:48,0,1597	0/1:30,5:33:96.73:97,0,814	0/0:20,5:25:20.64:0,21,405	0/1:39,5:45:99:424,0,590	0/1:70,15:64:99:666,0,2421	0/1:24,17:38:99:679,0,894	0/1:8,4:11:99:228,0,229
chr10	13555591	.	A	ATG	6255.03	PASS	AB=0.874;AC=23;AF=0.442;AN=52;BaseQRankSum=2.782;DP=1352;FS=0.000;HRun=0;HaplotypeScore=658.8033;InbreedingCoeff=-0.7908;MQ=28.40;MQ0=143;MQRankSum=-4.660;QD=5.31;ReadPosRankSum=-0.129;VQSLOD=0.9329;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:27,3:30:98.74:99,0,280	0/1:19,6:22:99:210,0,140	./.	./.	0/1:34,17:48:99:527,0,161	0/1:24,4:24:99:154,0,196	0/1:43,6:36:99:244,0,234	0/1:92,10:72:99:310,0,1021	0/1:49,2:44:24.45:24,0,444	0/1:100,17:96:99:603,0,1081	0/1:36,9:40:99:377,0,217	0/1:39,9:48:99:378,0,519	0/1:48,2:45:97.29:97,0,553	0/1:44,2:41:19.34:19,0,461	0/0:60,1:52:67.66:0,68,478	0/1:64,1:56:14.13:14,0,494	0/0:20,0:19:35.19:0,35,278	0/1:17,1:17:27.79:28,0,187	0/1:40,3:27:99:103,0,380	0/1:39,15:51:99:565,0,233	0/1:67,5:56:62.33:62,0,322	0/1:48,18:63:99:737,0,386	0/1:22,13:33:99:469,0,138	0/0:22,3:25:17.65:0,18,147	0/1:37,10:47:99:381,0,246	0/1:73,10:61:99:409,0,950	0/1:37,4:38:99:317,0,336	0/1:9,3:11:75.81:126,0,76
chr10	13555613	.	G	GAA	1301.97	PASS	AB=0.967;AC=25;AF=0.481;AN=52;BaseQRankSum=4.248;DP=829;FS=0.000;HRun=0;HaplotypeScore=439.5225;InbreedingCoeff=-0.3683;MQ=28.18;MQ0=49;MQRankSum=-2.082;QD=1.93;ReadPosRankSum=-3.930;VQSLOD=0.0942;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:22:6.34:6,0,98	0/1:14,1:13:13.08:70,0,13	./.	./.	1/1:34,1:33:9.13:104,9,0	0/1:15,1:16:3.99:95,0,4	0/1:24,0:22:37.26:38,0,37	0/1:64,0:43:99:198,0,957	0/1:32,1:27:99:101,0,104	0/0:58,0:48:1.45:0,1,1003	0/1:31,2:29:25.81:52,0,26	0/0:29,0:29:10.25:0,10,160	0/1:32,1:32:58.19:58,0,163	0/1:35,3:34:5.23:50,0,5	1/1:42,3:41:11.19:91,11,0	0/1:45,3:41:52.12:236,0,52	0/1:16,0:15:2.32:2,0,90	0/1:8,1:9:21.78:22,0,35	0/1:23,1:16:80.38:80,0,106	1/1:37,0:36:6.48:86,6,0	0/1:43,0:40:39.42:39,0,48	0/1:31,0:30:29.42:29,0,38	1/1:23,0:23:4.64:51,5,0	0/0:18,0:18:2.21:0,2,22	0/0:23,0:23:8.80:0,9,110	0/1:54,0:41:22.35:22,0,992	0/1:30,1:28:17.91:18,0,252	0/0:7,0:7:3.15:0,3,67
chr10	13555614	.	TGA	T	179.22	PASS	AB=0.975;AC=18;AF=0.346;AN=52;BaseQRankSum=-0.120;DP=776;FS=41.638;HRun=0;HaplotypeScore=383.0694;InbreedingCoeff=-0.0771;MQ=28.24;MQ0=43;MQRankSum=-0.590;QD=0.50;ReadPosRankSum=-6.051;VQSLOD=-0.2000;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:5.09:0,5,114	0/1:14,1:13:35.28:35,0,40	./.	./.	0/0:34,0:32:1.28:0,1,3	1/1:14,1:15:2.84:20,3,0	0/0:24,0:22:16.45:0,16,195	0/0:49,0:29:49.40:0,49,1065	0/1:32,0:26:11.69:12,0,102	0/0:54,1:48:22.04:0,22,1045	0/0:31,2:29:10.22:0,10,38	0/0:27,0:27:8.24:0,8,80	0/1:32,2:32:44.39:87,0,44	1/1:36,0:32:5.81:38,6,0	1/1:43,0:39:1.23:5,1,0	0/1:47,1:41:21.81:22,0,32	0/1:14,2:15:21.44:21,0,48	0/1:8,0:8:6.85:7,0,28	0/1:15,0:9:20.26:20,0,185	0/0:37,0:36:3.71:0,4,7	0/1:38,0:37:19.88:20,0,50	0/0:29,0:28:2.08:0,2,25	1/1:22,1:23:0.70:18,1,0	0/0:16,0:17:3.37:0,3,31	0/0:20,0:20:5.15:0,5,71	0/0:53,0:41:11.43:0,11,1161	0/1:30,0:27:3.23:3,0,378	0/1:6,0:6:12.51:13,0,56
chr10	13557364	.	AAAT	A	3921.97	PASS	AB=0.956;AC=40;AF=0.714;AN=56;BaseQRankSum=7.988;DP=553;FS=7.179;HRun=0;HaplotypeScore=101.2960;InbreedingCoeff=0.5530;MQ=64.39;MQ0=12;MQRankSum=2.900;QD=9.12;ReadPosRankSum=4.357;VQSLOD=2.4383;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:35:99:0,101,1441	1/1:4,0:4:2.54:10,3,0	0/0:13,0:10:20.71:0,21,301	0/0:8,0:7:3.57:0,4,108	1/1:21,1:20:50.92:278,51,0	1/1:16,0:16:1.34:56,1,0	1/1:13,1:13:15.38:90,15,0	1/1:26,1:27:32.47:452,32,0	0/1:21,1:21:37.01:73,0,37	1/1:11,3:12:29.53:226,30,0	1/1:14,2:16:34.25:252,34,0	0/0:23,0:22:60.97:0,61,780	1/1:17,1:18:22.17:160,22,0	1/1:18,1:19:24.06:235,24,0	1/1:16,0:15:25.52:98,26,0	1/1:16,0:16:22.94:86,23,0	1/1:34,0:34:35.87:233,36,0	0/1:15,0:15:28.84:29,0,38	0/1:25,3:27:12.39:338,0,12	1/1:17,1:16:35.88:230,36,0	1/1:14,2:15:13.75:118,14,0	0/0:22,0:22:56.87:0,57,931	1/1:20,0:20:12.72:109,13,0	1/1:31,2:31:22.06:206,22,0	0/0:20,0:18:48.06:0,48,672	1/1:22,1:23:48.85:314,49,0	0/1:27,1:27:30.98:290,0,31	1/1:11,0:10:10.28:39,10,0
chr10	13557365	.	AAT	A	8687.70	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=2.661;DP=532;FS=0.000;HRun=0;HaplotypeScore=74.5738;InbreedingCoeff=0.9076;MQ=66.36;MQ0=10;MQRankSum=1.277;QD=21.14;ReadPosRankSum=2.774;VQSLOD=5.1277;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:35:87.48:0,87,1053	1/1:0,3:3:3.01:38,3,0	0/0:13,0:10:24.82:0,25,261	0/0:9,0:8:7.26:0,7,127	1/1:4,18:20:56.73:584,57,0	1/1:2,13:15:26.69:313,27,0	1/1:4,10:13:20.69:223,21,0	1/1:3,24:27:68.93:666,69,0	1/1:4,17:21:23.69:260,24,0	1/1:4,10:12:33.04:356,33,0	1/1:3,13:16:37.89:289,38,0	0/0:22,0:22:47:0,47,509	1/1:9,5:14:39.72:421,40,0	1/1:13,5:18:45:478,45,0	1/1:1,14:14:30.09:376,30,0	1/1:2,14:16:29.93:351,30,0	1/1:5,27:33:68.64:785,69,0	1/1:4,10:14:3.76:184,4,0	1/1:8,19:26:25.65:527,26,0	1/1:4,14:16:47.25:391,47,0	1/1:2,13:14:15.01:161,15,0	0/0:22,0:22:50.03:0,50,674	1/1:1,19:20:32.47:352,32,0	1/1:5,26:30:47.92:520,48,0	0/0:18,0:18:44.84:0,45,495	1/1:2,19:21:53.67:582,54,0	1/1:18,8:26:53.92:679,54,0	1/1:2,9:10:12.04:151,12,0
chr10	13557366	.	AT	A	5846.75	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=6.073;DP=511;FS=1.497;HRun=1;HaplotypeScore=74.0567;InbreedingCoeff=0.8958;MQ=67.51;MQ0=9;MQRankSum=-0.535;QD=14.54;ReadPosRankSum=0.899;VQSLOD=4.4114;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:30:64.30:0,64,711	1/1:3,0:3:2.96:19,3,0	0/0:13,0:10:13.01:0,13,208	0/0:9,0:8:0.53:0,1,91	1/1:20,1:20:56.17:368,56,0	1/1:13,2:15:26.64:186,27,0	1/1:13,1:13:20.65:148,21,0	1/1:25,2:27:68.59:526,69,0	1/1:18,1:19:23.65:167,24,0	1/1:14,0:12:32.38:207,32,0	1/1:15,1:16:36.53:242,37,0	0/0:16,0:16:35.06:0,35,338	1/1:14,1:15:44.60:348,45,0	1/1:17,0:17:44.75:352,45,0	1/1:15,0:14:29.50:184,29,0	1/1:15,1:16:29.57:205,30,0	1/1:29,3:32:67.97:463,68,0	1/1:12,1:13:17.74:132,18,0	1/1:24,2:25:41.19:464,41,0	1/1:15,3:16:47.47:369,47,0	1/1:15,0:14:14.71:91,15,0	0/0:21,0:21:50.45:0,50,482	1/1:19,0:19:32.39:199,32,0	1/1:31,0:30:39.05:253,39,0	0/0:18,0:18:37.92:0,38,333	1/1:21,0:21:53.34:362,53,0	1/1:22,2:24:68.80:489,69,0	1/1:10,0:10:11.81:74,12,0
chr10	13558344	.	T	TA	4015.07	PASS	AB=0.720;AC=45;AF=0.804;AN=56;BaseQRankSum=-3.207;DP=547;FS=2.962;HRun=15;HaplotypeScore=72.5971;InbreedingCoeff=-0.1462;MQ=70.48;MQ0=1;MQRankSum=0.177;QD=7.49;ReadPosRankSum=-0.724;VQSLOD=2.7020;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:21,9:30:4.82:305,5,0	1/1:5,1:6:8.83:62,9,0	0/1:19,1:17:6.87:7,0,41	0/0:11,0:9:2.89:0,3,11	0/1:19,7:27:15.95:178,0,16	1/1:8,2:15:34.84:217,35,0	1/1:5,2:17:20.03:118,20,0	1/1:10,13:23:22.13:273,22,0	1/1:7,10:17:2.97:133,3,0	1/1:19,8:29:14.06:177,14,0	0/1:11,14:26:21.18:149,0,21	1/1:5,15:20:5.96:158,6,0	0/1:6,6:12:10.57:20,0,11	1/1:3,14:18:17.96:146,18,0	0/1:7,9:16:21.05:58,0,21	1/1:12,4:16:4.74:129,5,0	1/1:12,7:19:28.11:199,28,0	1/1:12,7:20:20.40:244,20,0	0/1:16,5:21:34.66:151,0,35	1/1:11,10:22:0.03:177,0,0	1/1:2,17:19:26.97:227,27,0	1/1:9,11:21:7.01:144,7,0	1/1:18,4:23:9.80:188,10,0	0/1:7,16:24:22.87:163,0,23	1/1:6,7:12:0.06:37,0,0	0/1:13,12:26:46.62:161,0,47	1/1:10,9:20:5.64:131,6,0	0/1:9,4:14:6.03:61,0,6
chr10	13558500	.	AAAGG	A	250.59	PASS	AC=4;AF=0.074;AN=54;BaseQRankSum=4.744;DP=561;FS=0.000;HRun=0;HaplotypeScore=83.4151;InbreedingCoeff=0.8131;MQ=57.07;MQ0=4;MQRankSum=0.085;QD=8.35;ReadPosRankSum=2.145;VQSLOD=1.4766;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:59.79:0,60,928	0/0:8,0:8:20.97:0,21,345	0/0:11,0:6:2.94:0,3,18	./.	0/0:22,0:22:63.07:0,63,970	1/1:2,14:16:18.06:305,18,0	1/1:5,9:14:3.01:51,3,0	0/0:36,0:36:62.82:0,63,747	0/0:9,0:9:24.04:0,24,401	0/0:25,0:25:57.12:0,57,933	0/0:29,0:29:72.17:0,72,1379	0/0:23,0:23:66.12:0,66,1198	0/0:13,0:13:30.05:0,30,475	0/0:16,0:16:42.10:0,42,806	0/0:23,0:23:63.13:0,63,1172	0/0:18,0:18:50.98:0,51,1006	0/0:28,0:28:72:0,72,1300	0/0:25,0:25:59.91:0,60,860	0/0:28,0:27:68.89:0,69,1133	0/0:23,0:23:69.08:0,69,1215	0/0:21,0:21:48.10:0,48,893	0/0:22,0:22:60.10:0,60,1129	0/0:16,0:16:41.98:0,42,715	0/0:19,0:19:41.96:0,42,737	0/0:20,0:20:48.11:0,48,905	0/0:20,0:20:51.13:0,51,967	0/0:24,0:24:40.11:0,40,1063	0/0:18,0:18:54.10:0,54,956
chr10	13558879	.	C	CTTAT	6024.30	PASS	AB=1.000;AC=43;AF=0.860;AN=50;BaseQRankSum=-3.269;DP=360;FS=4.822;HRun=0;HaplotypeScore=56.1780;InbreedingCoeff=0.5455;MQ=72.94;MQ0=1;MQRankSum=-1.162;QD=19.62;ReadPosRankSum=0.395;VQSLOD=3.7646;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:9,0:9:4.91:5,0,218	./.	./.	./.	1/1:9,4:13:9:163,9,0	1/1:11,0:17:30.09:475,30,0	1/1:3,0:3:3.01:50,3,0	1/1:31,0:30:15.04:268,15,0	1/1:9,6:15:15.05:356,15,0	1/1:6,4:10:12.04:285,12,0	1/1:5,6:12:18.02:341,18,0	0/0:11,0:11:18.06:0,18,284	1/1:4,3:7:9.03:214,9,0	1/1:8,3:11:9.03:214,9,0	1/1:6,1:8:3.01:71,3,0	1/1:10,3:13:9.03:214,9,0	1/1:9,8:18:24.08:570,24,0	1/1:15,13:28:19.14:835,19,0	1/1:22,0:22:17.50:250,18,0	1/1:8,0:9:3.01:52,3,0	1/1:7,0:8:3.01:42,3,0	0/0:3,0:3:6.02:0,6,94	1/1:4,3:7:9.03:214,9,0	1/1:2,1:3:3.01:71,3,0	0/0:18,0:18:18.06:0,18,284	1/1:10,6:16:18.06:408,18,0	1/1:13,3:16:9.03:214,9,0	1/1:19,10:31:30.10:712,30,0
chr10	13560437	.	TACAC	T	11691.70	PASS	AB=0.592;AC=42;AF=0.750;AN=56;BaseQRankSum=1.053;DP=579;FS=14.321;HRun=0;HaplotypeScore=110.2820;InbreedingCoeff=0.7607;MQ=63.78;MQ0=11;MQRankSum=-1.471;QD=26.39;ReadPosRankSum=1.329;VQSLOD=3.8981;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:37:71.98:0,72,1640	1/1:2,7:9:18.06:285,18,0	0/0:28,0:10:9.43:0,9,82	0/0:19,0:10:6.02:0,6,88	1/1:5,11:16:30.03:464,30,0	0/1:4,3:27:40.80:41,0,177	0/1:14,1:31:7.85:8,0,142	1/1:12,16:26:48.13:742,48,0	1/1:7,10:17:27.09:446,27,0	1/1:8,21:29:66.18:1018,66,0	1/1:2,13:15:27.09:446,27,0	0/0:26,0:27:77.99:0,78,1758	1/1:5,16:21:39.03:643,39,0	1/1:3,17:20:42.14:693,42,0	1/1:3,18:22:42.14:672,42,0	1/1:2,10:13:24.08:375,24,0	1/1:5,15:22:51.16:799,51,0	1/1:7,16:22:48.16:792,48,0	1/1:7,9:15:24.07:371,24,0	1/1:4,11:15:26.81:414,27,0	1/1:10,15:24:33.11:545,33,0	0/0:9,0:10:26.81:0,27,546	1/1:2,11:13:20.74:346,21,0	1/1:3,14:18:36.12:581,36,0	0/0:14,0:14:29.84:0,30,659	1/1:7,22:30:69.22:1093,69,0	1/1:8,19:28:54.18:870,54,0	1/1:1,2:3:3.01:50,3,0
chr10	13560649	.	TA	T	3987.51	PASS	AB=0.991;AC=46;AF=0.821;AN=56;BaseQRankSum=7.630;DP=552;FS=1.637;HRun=11;HaplotypeScore=128.5039;InbreedingCoeff=0.7033;MQ=79.94;MQ0=8;MQRankSum=-0.804;QD=7.91;ReadPosRankSum=4.743;VQSLOD=1.9570;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,1:17:23.31:0,23,405	1/1:6,0:6:11.11:52,11,0	0/1:51,1:28:12.63:13,0,93	0/1:29,0:17:10.12:10,0,70	1/1:22,0:21:45.11:218,45,0	1/1:0,22:21:47.95:393,48,0	1/1:4,9:13:29.42:230,29,0	1/1:44,0:44:50.30:279,50,0	1/1:14,0:14:18.67:119,19,0	1/1:27,0:27:41.13:184,41,0	1/1:19,1:20:19.73:160,20,0	0/0:14,0:14:37.28:0,37,359	1/1:13,0:13:30.34:141,30,0	1/1:10,0:10:13.91:64,14,0	1/1:17,0:17:34.28:155,34,0	1/1:16,0:16:28.26:144,28,0	1/1:26,0:26:34.55:202,35,0	1/1:27,0:26:60.64:278,61,0	1/1:28,0:28:46.46:199,46,0	1/1:17,0:17:42.04:215,42,0	1/1:8,0:8:12.50:60,12,0	0/0:1,0:1:3.01:0,3,32	1/1:6,0:6:13.80:68,14,0	1/1:10,0:10:18.05:97,18,0	0/0:16,0:16:36.08:0,36,372	1/1:23,0:23:40.05:195,40,0	1/1:27,0:27:55.68:270,56,0	1/1:26,0:26:35.53:244,36,0
chr10	13560659	.	AAC	A	9072.83	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=0.869;DP=531;FS=1.835;HRun=0;HaplotypeScore=109.8402;InbreedingCoeff=0.9541;MQ=80.32;MQ0=8;MQRankSum=-0.674;QD=24.46;ReadPosRankSum=4.811;VQSLOD=5.7901;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:54.05:0,54,833	1/1:4,0:4:12.02:116,12,0	0/0:47,0:23:24.70:0,25,306	0/0:30,0:18:19.80:0,20,220	1/1:19,0:19:50.78:509,51,0	0/0:22,0:21:35.50:0,36,121	0/0:13,0:13:20.37:0,20,99	1/1:36,2:38:78.02:1051,78,0	1/1:13,0:13:22.05:283,22,0	1/1:23,0:23:53.25:654,53,0	1/1:18,0:18:33.74:404,34,0	0/0:14,0:14:42.14:0,42,726	1/1:13,1:14:36.07:379,36,0	1/1:14,0:14:15.03:148,15,0	1/1:17,0:17:39.08:401,39,0	1/1:16,0:16:35.11:356,35,0	1/1:21,2:23:40.44:578,40,0	1/1:28,1:28:66.13:663,66,0	1/1:29,0:29:72.27:753,72,0	1/1:17,0:17:47.86:436,48,0	1/1:8,0:8:15.02:154,15,0	0/0:1,0:1:3.01:0,3,55	1/1:6,0:6:15:143,15,0	1/1:10,0:10:21.94:250,22,0	0/0:14,0:14:42.13:0,42,722	1/1:21,1:22:57.29:635,57,0	1/1:25,0:25:60.09:576,60,0	1/1:26,0:26:40.56:585,41,0
chr10	13560660	.	AC	A	11123.61	PASS	AB=1.000;AC=43;AF=0.768;AN=56;BaseQRankSum=3.056;DP=518;FS=3.726;HRun=2;HaplotypeScore=91.4689;InbreedingCoeff=0.7194;MQ=80.15;MQ0=8;MQRankSum=-2.038;QD=24.29;ReadPosRankSum=4.186;VQSLOD=4.7083;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:45.55:0,46,539	1/1:0,4:4:12.04:153,12,0	0/1:44,0:22:6.84:7,0,189	0/1:31,0:18:25.56:26,0,136	1/1:0,18:18:51.09:614,51,0	0/1:22,0:21:1.42:1,0,3	0/0:13,0:13:12.62:0,13,94	1/1:4,33:37:99:1167,105,0	1/1:1,10:12:30.04:363,30,0	1/1:1,21:22:63.18:781,63,0	1/1:3,14:18:47.58:510,48,0	0/0:14,0:14:42.12:0,42,534	1/1:1,13:14:35.98:418,36,0	1/1:0,14:14:15.05:192,15,0	1/1:0,17:17:39.07:479,39,0	1/1:2,14:16:39.08:479,39,0	1/1:3,20:23:57.38:646,57,0	1/1:1,28:29:66.21:839,66,0	1/1:1,26:28:78.11:868,78,0	1/1:0,17:17:48.08:584,48,0	1/1:0,8:8:14.99:173,15,0	0/0:1,0:1:3.01:0,3,40	1/1:0,5:5:15.05:190,15,0	1/1:2,8:10:29.92:341,30,0	0/0:14,0:14:42.12:0,42,531	1/1:1,20:21:63.06:723,63,0	1/1:0,25:25:60.19:766,60,0	1/1:0,23:23:63.20:804,63,0
chr10	13560916	.	GTATT	G	1243.39	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.574;DP=529;FS=9.771;HRun=0;HaplotypeScore=81.7686;InbreedingCoeff=0.9579;MQ=65.66;MQ0=1;MQRankSum=-2.968;QD=32.72;ReadPosRankSum=3.414;VQSLOD=3.1745;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:72.25:0,72,1723	0/0:9,0:8:27.09:0,27,620	0/0:5,0:5:9.03:0,9,206	0/0:12,0:11:30.09:0,30,526	0/0:18,0:18:45.15:0,45,1016	1/1:1,18:19:45.15:788,45,0	1/1:3,16:19:33.11:577,33,0	0/0:36,0:36:84.27:0,84,1834	0/0:25,0:25:66.18:0,66,1473	0/0:20,0:20:54.18:0,54,1226	0/0:19,0:19:48.16:0,48,1072	0/0:10,0:10:30.10:0,30,692	0/0:19,0:19:51.17:0,51,1178	0/0:8,0:8:18.02:0,18,403	0/0:19,0:19:45.15:0,45,1000	0/0:19,0:19:45.15:0,45,1015	0/0:28,0:28:78.26:0,78,1799	0/0:26,0:26:60.21:0,60,1386	0/0:22,0:22:55.39:0,55,1174	0/0:20,0:20:57.20:0,57,1276	0/0:18,0:18:45.14:0,45,1061	0/0:7,0:7:15.04:0,15,310	0/0:14,0:14:36.12:0,36,861	0/0:13,0:13:33.07:0,33,683	0/0:23,0:23:57.20:0,57,1404	0/0:26,0:26:57.19:0,57,1339	0/0:30,0:30:87.30:0,87,2117	0/0:20,0:20:48.16:0,48,1173
chr10	13561064	.	GGTGTGT	G	12967.68	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=9.426;DP=642;FS=2.325;HRun=0;HaplotypeScore=149.2589;InbreedingCoeff=0.9140;MQ=54.09;MQ0=12;MQRankSum=-9.813;QD=27.24;ReadPosRankSum=2.243;VQSLOD=4.6833;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:48:87.23:0,87,2566	1/1:2,6:8:6.91:130,7,0	0/0:41,0:19:18.06:0,18,521	0/0:34,0:24:15.01:0,15,601	1/1:7,13:21:22.01:447,22,0	1/1:5,8:12:15.05:319,15,0	1/1:10,9:20:15.01:245,15,0	1/1:16,11:29:36.12:693,36,0	1/1:5,22:27:48.16:997,48,0	1/1:10,17:28:58.38:1056,58,0	1/1:3,15:18:27.05:510,27,0	0/0:15,0:16:32.45:0,32,950	1/1:5,25:30:60.05:1270,60,0	1/1:3,14:18:33.11:702,33,0	1/1:6,14:21:30.10:616,30,0	1/1:3,14:18:36.12:736,36,0	1/1:13,16:32:33.01:615,33,0	1/1:12,11:22:13:566,13,0	1/1:14,8:22:24.04:429,24,0	1/1:5,14:20:39.05:683,39,0	1/1:24,9:33:3.01:64,3,0	0/0:11,0:11:21.07:0,21,556	1/1:4,12:16:30.10:634,30,0	1/1:8,16:23:12.51:255,13,0	0/0:16,0:16:39.13:0,39,1278	1/1:8,18:26:54.16:1055,54,0	1/1:7,15:23:38.91:775,39,0	1/1:2,2:5:9.03:170,9,0
chr10	13561815	.	GA	G	508.67	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=3.547;DP=312;FS=7.484;HRun=10;HaplotypeScore=35.9355;InbreedingCoeff=0.5055;MQ=64.50;MQ0=1;MQRankSum=-0.065;QD=11.83;ReadPosRankSum=0.222;VQSLOD=1.8466;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,3:29:3.47:0,3,667	0/0:4,0:4:6.02:0,6,66	0/1:11,0:8:7.61:8,0,137	0/0:10,0:9:0.41:0,0,117	0/0:6,0:8:23.85:0,24,230	1/1:1,15:16:38.99:339,39,0	1/1:3,13:16:32.99:287,33,0	0/0:15,0:14:36.03:0,36,366	0/0:11,0:11:33.09:0,33,363	0/0:12,0:12:33.09:0,33,364	0/0:2,0:2:3.01:0,3,33	0/0:8,0:8:21.05:0,21,225	0/0:8,0:8:18.02:0,18,187	0/0:6,0:6:15.04:0,15,161	0/0:10,0:10:21.06:0,21,232	0/0:3,0:3:9.02:0,9,92	0/0:21,0:21:57.13:0,57,613	0/0:12,0:12:30.08:0,30,328	0/0:13,0:14:13.21:0,13,352	0/0:6,0:6:12.03:0,12,129	0/0:26,0:26:59.59:0,60,644	0/0:2,0:2:6.02:0,6,66	0/0:6,0:6:15.02:0,15,155	0/0:21,0:21:57.15:0,57,628	0/0:12,0:12:30.07:0,30,324	0/0:10,0:10:16.95:0,17,226	0/0:12,0:12:23.65:0,24,242	0/0:1,0:1:3.01:0,3,33
chr10	13561888	.	G	GCACA	566.62	PASS	AB=0.988;AC=25;AF=0.625;AN=40;BaseQRankSum=-0.315;DP=185;FS=0.000;HRun=0;HaplotypeScore=40.2109;InbreedingCoeff=0.3246;MQ=76.69;MQ0=8;MQRankSum=-1.225;QD=5.56;ReadPosRankSum=-0.945;VQSLOD=1.2841;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	1/1:1,0:1:3.01:37,3,0	./.	./.	./.	0/0:5,0:6:3:0,3,28	0/0:6,0:8:6.01:0,6,56	1/1:7,0:7:0.47:1,0,0	0/1:9,0:8:0:0,0,0	1/1:5,1:7:6.02:113,6,0	./.	0/0:5,0:5:3.01:0,3,46	1/1:2,0:2:0.89:2,1,0	1/1:5,0:5:2.50:9,2,0	0/1:3,0:3:0:0,0,0	0/1:4,0:3:0:0,0,0	1/1:9,1:10:3:70,3,0	0/1:9,1:10:18.90:85,0,19	./.	0/1:5,0:5:0:0,0,0	0/1:10,0:10:0:0,0,0	0/0:2,0:2:3.01:0,3,46	./.	1/1:9,4:13:12.04:280,12,0	./.	1/1:6,0:6:2.97:20,3,0	0/1:5,0:5:0:0,0,0	1/1:2,0:4:7:52,7,0
chr10	13562712	.	G	GGACAA	3408.01	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=11.006;DP=858;FS=7.298;HRun=0;HaplotypeScore=187.4810;InbreedingCoeff=0.9995;MQ=83.66;MQ0=0;MQRankSum=-10.656;QD=66.82;ReadPosRankSum=-3.205;VQSLOD=2.9669;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:52:99:0,156,3343	0/0:17,0:17:51.16:0,51,1122	0/0:35,0:35:93.23:0,93,1885	0/0:19,0:19:57.17:0,57,1113	0/0:30,0:30:87.30:0,87,2009	1/1:4,11:16:42.14:1094,42,0	1/1:10,24:35:99:2314,105,0	0/0:31,0:31:90.30:0,90,2024	0/0:34,0:34:99:0,102,2371	0/0:30,0:30:90.29:0,90,1990	0/0:23,0:23:69.22:0,69,1563	0/0:27,0:27:81.28:0,81,1884	0/0:43,0:43:99:0,129,2902	0/0:38,0:38:99:0,114,2605	0/0:32,0:32:96.31:0,96,2191	0/0:35,0:35:99:0,105,2429	0/0:37,0:37:99:0,108,2438	0/0:24,0:24:72.23:0,72,1609	0/0:20,0:20:60.21:0,60,1383	0/0:30,0:30:90.31:0,90,2097	0/0:61,0:61:99:0,184,4160	0/0:25,0:25:69.24:0,69,1591	0/0:30,0:30:84.27:0,84,1911	0/0:32,0:32:92.83:0,93,2143	0/0:20,0:20:60.19:0,60,1352	0/0:32,0:32:93.32:0,93,2158	0/0:40,0:40:99:0,120,2796	0/0:9,0:9:27.09:0,27,629
chr10	13562713	.	T	TG	706.51	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.745;DP=854;FS=3.001;HRun=1;HaplotypeScore=123.9095;InbreedingCoeff=0.9769;MQ=82.45;MQ0=0;MQRankSum=-9.170;QD=13.85;ReadPosRankSum=-0.559;VQSLOD=2.8422;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:52:99:0,157,2177	0/0:17,0:17:51.14:0,51,693	0/0:33,0:33:46.15:0,46,1106	0/0:19,0:19:51.08:0,51,601	0/0:30,0:30:90.28:0,90,1226	1/1:5,11:16:10.55:281,11,0	1/1:10,25:35:28.63:541,29,0	0/0:32,0:32:93.30:0,93,1284	0/0:34,0:34:99:0,102,1424	0/0:29,0:29:84.27:0,84,1159	0/0:23,0:23:69.23:0,69,965	0/0:28,0:28:81.27:0,81,1127	0/0:43,0:43:99:0,129,1783	0/0:38,0:38:99:0,114,1556	0/0:32,0:32:96.32:0,96,1341	0/0:35,0:35:99:0,105,1454	0/0:37,0:37:99:0,108,1501	0/0:23,0:23:69.21:0,69,946	0/0:20,0:20:60.20:0,60,839	0/0:30,0:30:90.30:0,90,1259	0/0:61,0:61:99:0,184,2555	0/0:25,0:25:75.22:0,75,1007	0/0:29,0:29:84.27:0,84,1158	0/0:32,0:32:93.29:0,93,1284	0/0:20,0:20:60.20:0,60,837	0/0:31,0:31:93.31:0,93,1299	0/0:40,0:40:99:0,120,1679	0/0:9,0:9:27.09:0,27,378
chr10	13563841	.	T	TG	162.08	PASS	AB=0.874;AC=3;AF=0.054;AN=56;BaseQRankSum=7.375;DP=644;FS=6.080;HRun=0;HaplotypeScore=77.3427;InbreedingCoeff=-0.0525;MQ=86.64;MQ0=0;MQRankSum=-7.155;QD=2.10;ReadPosRankSum=-4.275;VQSLOD=0.0466;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,123,1691	0/0:7,0:7:21.07:0,21,294	0/0:29,0:28:84.28:0,84,1162	0/0:29,0:29:84.25:0,84,1132	0/0:20,1:21:54.18:0,54,750	0/0:22,0:22:60.18:0,60,817	0/0:31,0:31:93.31:0,93,1301	0/0:18,0:18:51.16:0,51,697	0/1:28,2:30:1.18:1,0,1066	0/0:19,0:19:57.19:0,57,798	0/0:10,0:10:30.10:0,30,419	0/0:24,0:24:72.24:0,72,996	0/1:15,7:22:99:236,0,468	0/1:23,2:25:3.55:4,0,849	0/0:25,1:26:45.29:0,45,973	0/0:21,1:22:2.58:0,3,703	0/0:37,2:39:38.30:0,38,1393	0/0:21,1:22:35.24:0,35,810	0/0:16,0:16:48.16:0,48,670	0/0:14,0:14:30.10:0,30,419	0/0:68,3:71:99:0,149,2521	0/0:13,0:13:39.13:0,39,545	0/0:13,0:13:36.09:0,36,482	0/0:22,0:22:66.22:0,66,922	0/0:13,0:13:36.12:0,36,504	0/0:20,0:20:54.18:0,54,756	0/0:20,1:21:9.20:0,9,668	0/0:4,0:4:12.04:0,12,168
chr10	13564600	.	CCAA	C	3903.46	PASS	AB=0.747;AC=19;AF=0.339;AN=56;BaseQRankSum=2.755;DP=444;FS=30.445;HRun=0;HaplotypeScore=83.6783;InbreedingCoeff=-0.3846;MQ=46.26;MQ0=7;MQRankSum=-3.328;QD=13.23;ReadPosRankSum=3.922;VQSLOD=1.6776;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:13.63:0,14,337	0/1:7,2:9:99:132,0,158	0/0:16,0:8:23.51:0,24,350	0/0:18,0:8:17.89:0,18,298	0/1:19,5:18:99:170,0,239	0/0:21,0:16:14.11:0,14,373	0/1:15,0:14:5.90:6,0,277	0/1:22,9:27:99:190,0,577	0/1:8,7:15:72.77:303,0,73	0/0:10,0:10:20.93:0,21,195	0/1:9,9:18:99:351,0,209	0/0:9,0:7:20.05:0,20,292	0/1:7,3:10:99:157,0,183	0/1:11,5:12:99:231,0,128	0/1:11,2:10:99:171,0,146	0/1:9,6:15:99:314,0,227	0/1:17,9:24:99:227,0,140	0/1:11,6:11:99:201,0,114	0/1:12,7:18:99:254,0,377	0/0:14,0:14:14.88:0,15,135	0/0:4,2:5:9.49:0,9,143	0/0:10,0:10:20.82:0,21,190	0/1:4,7:8:52.98:216,0,53	0/1:9,4:13:64.04:82,0,64	0/0:24,0:22:8.91:0,9,92	0/1:10,12:22:99:452,0,274	0/1:6,10:16:89.35:350,0,89	1/1:2,2:2:6.02:97,6,0
chr10	13564603	.	A	AAAAAAAAAAAAAAAAAC	26103.54	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-1.901;DP=460;FS=25.716;HRun=0;HaplotypeScore=180.5417;InbreedingCoeff=0.7784;MQ=47.37;MQ0=7;MQRankSum=-5.890;QD=61.28;ReadPosRankSum=2.122;VQSLOD=2.6196;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:20:29.96:503,30,0	1/1:9,0:9:18.03:696,18,0	0/0:15,0:8:20.72:0,21,312	0/0:19,0:9:17.74:0,18,393	1/1:24,0:18:35.97:960,36,0	1/1:21,0:16:30.03:841,30,0	1/1:15,0:14:21.03:582,21,0	1/1:29,0:25:52.42:1205,52,0	1/1:13,0:14:29.77:1417,30,0	1/1:3,0:15:17.23:1082,17,0	1/1:17,0:18:42.04:1305,42,0	1/1:9,0:7:14.79:372,15,0	1/1:9,0:9:21.07:1017,21,0	1/1:16,0:12:30.09:1140,30,0	1/1:15,0:12:21.05:773,21,0	1/1:17,0:17:39.12:1710,39,0	1/1:25,0:24:40.70:1755,41,0	1/1:19,0:13:24.07:1461,24,0	1/1:22,0:21:47.14:1886,47,0	1/1:5,1:21:12.04:415,12,0	1/1:5,0:4:6.02:355,6,0	1/1:9,0:9:11.99:308,12,0	1/1:12,0:9:24.04:1177,24,0	1/1:14,0:13:16.75:603,17,0	1/1:24,0:22:3.01:94,3,0	1/1:20,0:21:56.65:2679,57,0	1/1:17,0:17:33.07:1353,33,0	1/1:4,0:2:6.02:413,6,0
chr10	13564612	.	A	AAAAAAAAAAAC	10966.01	PASS	AB=1.000;AC=34;AF=0.607;AN=56;BaseQRankSum=8.204;DP=448;FS=3.782;HRun=0;HaplotypeScore=156.6170;InbreedingCoeff=-0.3533;MQ=56.96;MQ0=2;MQRankSum=-9.779;QD=26.68;ReadPosRankSum=7.671;VQSLOD=3.6148;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,0:22:29.97:539,30,0	0/1:9,0:9:4.62:290,0,5	0/0:15,0:10:19.98:0,20,389	0/0:22,0:14:21.36:0,21,457	1/1:22,0:16:32.63:430,33,0	1/1:18,0:14:30.01:597,30,0	0/1:14,0:13:8.17:364,0,8	0/1:31,0:27:63.62:636,0,64	0/1:13,0:13:38.10:353,0,38	0/1:12,0:11:78.36:449,0,78	0/1:16,0:16:22.06:439,0,22	1/1:12,0:10:30.01:527,30,0	0/1:9,0:9:24.54:323,0,25	1/1:14,0:10:30.07:477,30,0	0/1:13,0:10:48.06:280,0,48	0/1:15,0:15:31.40:520,0,31	0/1:27,0:25:21.60:756,0,22	0/1:21,0:16:75.11:419,0,75	0/1:21,0:21:17.04:1083,0,17	0/1:13,0:13:45.50:184,0,46	0/1:5,0:4:8.85:231,0,9	1/1:8,0:9:24.02:361,24,0	1/1:13,0:10:1.07:228,1,0	0/1:14,0:13:57.67:127,0,58	1/1:1,11:22:3.01:168,3,0	0/1:24,0:24:11.43:831,0,11	0/1:16,0:16:10.86:290,0,11	0/1:5,0:3:16.62:63,0,17
chr10	13565237	.	GT	G	592.96	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-2.362;DP=544;FS=37.555;HRun=1;HaplotypeScore=86.8056;InbreedingCoeff=0.9546;MQ=89.98;MQ0=0;MQRankSum=-3.219;QD=19.13;ReadPosRankSum=-7.363;VQSLOD=0.2153;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:13,4:17:47.91:422,48,0	0/0:13,0:13:39.06:0,39,566	0/0:22,0:22:45.51:0,46,809	0/0:21,1:22:38.52:0,39,816	0/0:17,0:17:36.08:0,36,542	0/0:18,0:18:54.15:0,54,807	0/0:27,0:27:81.28:0,81,1290	0/0:22,0:22:66.17:0,66,976	0/0:23,0:23:66.22:0,66,1029	0/0:19,0:19:54.18:0,54,821	0/0:12,0:12:30.10:0,30,463	1/1:5,2:7:18:171,18,0	0/0:21,0:21:60.16:0,60,885	0/0:26,0:26:78.25:0,78,1200	0/0:19,0:19:54.17:0,54,840	0/0:20,0:20:60.20:0,60,958	0/0:36,0:36:99:0,108,1706	0/0:26,0:26:75.23:0,75,1167	0/0:20,0:20:60.17:0,60,884	0/0:16,0:16:45.15:0,45,710	0/0:53,0:53:99:0,157,2425	1/1:4,0:4:12:107,12,0	0/0:10,0:10:21.07:0,21,332	0/0:22,0:22:66.23:0,66,1052	1/1:3,0:3:5.94:43,6,0	0/0:23,0:23:66.17:0,66,1017	0/0:19,0:19:57.19:0,57,909	0/0:7,0:7:18.06:0,18,280
chr10	13565254	.	C	CA	578.02	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=5.152;DP=514;FS=24.230;HRun=2;HaplotypeScore=80.9610;InbreedingCoeff=0.9137;MQ=90.49;MQ0=0;MQRankSum=-2.878;QD=18.06;ReadPosRankSum=-3.860;VQSLOD=1.6572;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,14:15:24.08:332,24,0	0/0:6,0:6:15.05:0,15,182	0/0:20,0:20:54.16:0,54,660	0/0:22,0:22:63.16:0,63,755	0/0:9,0:9:18.06:0,18,223	0/0:17,0:17:51.16:0,51,631	0/0:29,0:29:81.25:0,81,1003	0/0:25,0:25:72.23:0,72,892	0/0:25,0:25:66.21:0,66,817	0/0:18,0:18:51.15:0,51,620	0/0:9,0:9:24.07:0,24,296	1/1:2,6:8:18.06:251,18,0	0/0:18,0:18:54.17:0,54,667	0/0:24,0:24:63.20:0,63,781	0/0:20,0:20:60.19:0,60,744	0/0:20,0:20:60.19:0,60,744	0/0:38,0:38:99:0,114,1393	0/0:26,0:26:72.19:0,72,876	0/0:16,0:16:39.09:0,39,449	0/0:13,0:13:36.11:0,36,446	0/0:47,0:47:99:0,126,1548	1/1:0,5:5:11.92:98,12,0	0/0:10,0:10:27.08:0,27,334	0/0:32,0:32:93.26:0,93,1135	1/1:0,4:4:3.01:43,3,0	0/0:17,0:17:51.16:0,51,631	0/0:18,0:18:51.16:0,51,630	0/0:3,0:3:9.03:0,9,111
chr10	13565496	.	GT	G	4096.93	PASS	AB=0.969;AC=50;AF=0.893;AN=56;BaseQRankSum=-2.116;DP=473;FS=10.863;HRun=9;HaplotypeScore=110.9800;InbreedingCoeff=0.5390;MQ=75.44;MQ0=3;MQRankSum=-0.729;QD=10.19;ReadPosRankSum=3.838;VQSLOD=1.5042;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,26:28:63.01:574,63,0	1/1:8,0:8:7.05:41,7,0	0/0:41,0:30:18.89:0,19,352	0/0:30,0:17:21.75:0,22,246	0/1:14,1:15:4.19:86,0,4	1/1:2,5:7:12:110,12,0	1/1:2,18:20:48.02:439,48,0	1/1:24,0:24:24.11:306,24,0	1/1:17,0:17:15.97:98,16,0	1/1:17,0:17:29.24:151,29,0	1/1:13,0:13:15.03:119,15,0	1/1:2,13:15:36.01:327,36,0	1/1:12,0:12:14.17:80,14,0	1/1:10,0:10:10.96:61,11,0	1/1:20,0:19:34.58:198,35,0	0/1:14,0:14:5.05:65,0,5	1/1:19,0:19:18.47:98,18,0	1/1:20,0:20:25.77:128,26,0	1/1:22,0:22:28.25:142,28,0	1/1:13,0:13:11.20:47,11,0	1/1:14,1:14:22.46:120,22,0	1/1:0,2:2:6:55,6,0	1/1:8,0:8:7.17:33,7,0	1/1:20,0:20:17.58:140,18,0	1/1:2,1:3:2.99:27,3,0	1/1:21,0:20:32.16:203,32,0	1/1:20,1:21:28.28:196,28,0	1/1:17,1:18:42.05:253,42,0
chr10	13565506	.	G	GT	3826.23	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-3.005;DP=427;FS=7.375;HRun=9;HaplotypeScore=114.7879;InbreedingCoeff=0.9399;MQ=68.21;MQ0=3;MQRankSum=-1.018;QD=13.33;ReadPosRankSum=-0.097;VQSLOD=2.8218;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:59.97:0,60,533	1/1:8,0:8:19.75:109,20,0	0/0:37,0:21:5.44:0,5,161	0/0:29,0:16:21.10:0,21,180	1/1:12,0:12:16.52:127,17,0	0/0:6,0:6:15.02:0,15,143	0/0:18,0:18:48.06:0,48,451	1/1:18,6:24:61.42:538,61,0	1/1:15,0:15:35.47:171,35,0	1/1:17,0:17:44.72:294,45,0	1/1:11,0:11:23.75:133,24,0	0/0:15,0:15:33.01:0,33,294	1/1:10,0:10:26.36:135,26,0	1/1:7,0:7:19:122,19,0	1/1:17,0:16:37.09:257,37,0	1/1:13,0:13:21.88:162,22,0	1/1:15,1:16:34.57:181,35,0	1/1:17,0:17:41.61:236,42,0	1/1:19,1:19:45.58:323,46,0	1/1:11,0:11:16.74:99,17,0	1/1:11,0:10:25.11:156,25,0	0/0:4,0:4:9.01:0,9,82	1/1:7,0:7:18.48:95,18,0	1/1:19,0:19:24.38:100,24,0	0/0:3,0:3:6:0,6,54	1/1:15,0:14:30.78:193,31,0	1/1:18,1:19:37.49:173,37,0	1/1:18,0:18:34.51:222,35,0
chr10	13565517	.	G	GT	1087.76	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=-3.839;DP=368;FS=18.545;HRun=6;HaplotypeScore=106.0134;InbreedingCoeff=0.7132;MQ=63.43;MQ0=2;MQRankSum=-2.342;QD=14.70;ReadPosRankSum=-0.186;VQSLOD=2.0627;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:10,17:27:54.17:668,54,0	0/0:7,0:7:15.03:0,15,151	0/0:28,0:14:5.60:0,6,128	0/1:27,0:15:38.69:64,0,39	0/0:11,0:11:23.96:0,24,224	0/0:5,0:5:15.03:0,15,153	0/0:19,0:19:45.10:0,45,459	0/0:18,0:18:48.10:0,48,486	0/0:13,0:13:39.08:0,39,394	0/0:15,0:15:33.06:0,33,330	0/0:8,0:8:24.04:0,24,239	1/1:3,10:13:2.29:312,2,0	0/0:9,0:9:24.05:0,24,244	0/0:6,0:6:18.04:0,18,181	0/0:15,0:14:39.08:0,39,395	0/0:11,0:11:24.05:0,24,242	0/0:14,0:14:42.08:0,42,420	0/0:17,0:18:34.57:0,35,359	0/0:17,0:16:38.99:0,39,350	0/0:11,0:11:12.01:0,12,112	0/0:8,0:7:15.03:0,15,149	1/1:1,3:4:9.03:113,9,0	0/0:6,0:6:15.01:0,15,142	0/0:14,0:14:28.60:0,29,281	1/1:0,2:2:6.02:75,6,0	0/0:11,0:10:27.05:0,27,271	0/0:16,0:16:27.16:0,27,379	0/0:13,0:13:30.06:0,30,305
chr10	13565519	.	TTTTTG	T	5036.32	PASS	AB=1.000;AC=41;AF=0.732;AN=56;BaseQRankSum=0.119;DP=356;FS=1.371;HRun=0;HaplotypeScore=109.8232;InbreedingCoeff=0.8093;MQ=63.79;MQ0=2;MQRankSum=-2.852;QD=19.30;ReadPosRankSum=4.513;VQSLOD=4.5368;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:48.08:0,48,882	1/1:7,0:7:15.05:199,15,0	0/1:27,0:14:10.15:10,0,22	0/0:28,0:15:14.63:0,15,240	1/1:11,0:11:24.03:288,24,0	0/0:5,0:5:15.05:0,15,302	0/0:18,0:18:42.14:0,42,866	1/1:17,0:17:27.08:345,27,0	1/1:13,0:13:27.09:338,27,0	1/1:14,0:14:21.06:280,21,0	1/1:8,0:8:12.04:148,12,0	0/0:13,0:13:27.09:0,27,539	1/1:9,0:9:18.06:223,18,0	1/1:6,0:6:9.03:126,9,0	1/1:15,0:14:15.05:202,15,0	1/1:10,0:10:21.06:267,21,0	1/1:14,0:14:36.03:430,36,0	1/1:16,0:16:36.54:525,37,0	1/1:8,8:15:24.08:325,24,0	1/1:2,9:11:9.03:111,9,0	1/1:7,0:6:3.01:51,3,0	0/0:4,0:4:9.03:0,9,154	1/1:5,0:5:12.04:145,12,0	1/1:14,0:14:18.01:216,18,0	0/0:2,0:2:6.02:0,6,103	1/1:11,0:10:21.06:279,21,0	1/1:16,0:16:32.95:366,33,0	1/1:13,0:13:12.04:161,12,0
chr10	13565753	.	CA	C	2306.93	PASS	AB=0.709;AC=36;AF=0.643;AN=56;BaseQRankSum=-3.159;DP=308;FS=2.570;HRun=14;HaplotypeScore=39.0328;InbreedingCoeff=0.3009;MQ=52.42;MQ0=11;MQRankSum=2.278;QD=8.81;ReadPosRankSum=1.590;VQSLOD=2.3731;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:3,1:3:14.05:14,0,20	1/1:0,5:5:14.88:103,15,0	0/0:3,0:2:6:0,6,52	0/1:6,0:5:11.25:11,0,47	1/1:3,9:13:22.83:150,23,0	0/0:2,0:6:11.46:0,11,61	0/0:7,0:12:23.42:0,23,145	1/1:9,7:15:5.18:110,5,0	1/1:1,3:4:2.97:20,3,0	1/1:3,8:11:25.79:168,26,0	1/1:10,8:18:1.80:157,2,0	0/0:4,0:4:0:0,0,0	0/1:3,4:7:15.71:48,0,16	0/0:2,2:5:0:0,0,0	1/1:2,5:6:14.70:96,15,0	1/1:0,3:4:7.99:47,8,0	0/1:10,17:29:33.02:162,0,33	1/1:5,19:23:49.58:334,50,0	1/1:6,8:12:23.78:164,24,0	0/1:3,4:8:13.44:54,0,13	1/1:8,11:16:10.43:148,10,0	0/0:3,0:3:2.94:0,3,19	1/1:2,7:9:7.64:46,8,0	0/1:4,8:12:31.86:99,0,32	0/0:13,0:12:10.16:0,10,69	1/1:4,7:10:22.84:148,23,0	1/1:7,10:17:31.64:211,32,0	1/1:5,11:15:6.91:184,7,0
chr10	13565777	.	T	TC	38.06	PASS	AC=4;AF=0.077;AN=52;BaseQRankSum=0.844;DP=256;FS=5.450;HRun=1;HaplotypeScore=46.3451;InbreedingCoeff=0.6871;MQ=68.58;MQ0=0;MQRankSum=-1.545;QD=6.34;ReadPosRankSum=0.768;VQSLOD=0.5865;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,2:2:6.02:90,6,0	0/0:6,0:6:18.06:0,18,234	0/0:13,0:10:30.10:0,30,379	0/0:10,0:10:26.28:0,26,287	0/0:10,0:10:24.04:0,24,293	0/0:4,0:4:12.04:0,12,156	0/0:8,0:8:18.02:0,18,215	0/0:15,0:14:39.13:0,39,506	0/0:2,0:2:3.01:0,3,39	0/0:8,0:8:24.08:0,24,312	0/0:13,0:13:30.10:0,30,388	./.	0/0:6,0:6:15.05:0,15,194	0/0:7,0:7:12.04:0,12,156	0/0:7,0:7:18.06:0,18,233	0/0:5,0:5:12.04:0,12,155	0/0:20,0:20:48.16:0,48,623	0/0:25,0:24:69.22:0,69,894	0/0:15,0:14:39.13:0,39,506	0/0:9,0:9:24.08:0,24,311	0/0:15,0:15:36.12:0,36,467	./.	0/0:8,0:8:15.05:0,15,195	0/0:9,0:9:24.08:0,24,311	1/1:0,4:4:3.01:45,3,0	0/0:6,0:6:18.06:0,18,234	0/0:17,0:17:42.14:0,42,544	0/0:12,0:12:30.10:0,30,389
chr10	13565884	.	AG	A	1397.91	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=11.133;DP=487;FS=34.382;HRun=1;HaplotypeScore=70.5262;InbreedingCoeff=0.9991;MQ=78.58;MQ0=0;MQRankSum=-10.794;QD=29.12;ReadPosRankSum=2.287;VQSLOD=1.7512;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,13:13:33.09:376,33,0	0/0:10,0:10:30.10:0,30,480	0/0:14,0:14:39.13:0,39,619	0/0:20,0:19:48.15:0,48,715	0/0:18,0:18:48.16:0,48,767	0/0:16,0:16:45.15:0,45,719	0/0:28,0:28:75.20:0,75,1151	0/0:21,0:21:63.21:0,63,1008	0/0:12,0:12:36.12:0,36,575	0/0:21,0:21:63.21:0,63,1008	0/0:17,0:17:48.16:0,48,767	1/1:0,15:15:45.12:511,45,0	0/0:15,0:15:42.14:0,42,671	0/0:11,0:11:30.10:0,30,480	0/0:15,0:15:45.15:0,45,720	0/0:14,0:14:42.13:0,42,649	0/0:39,0:39:99:0,114,1790	0/0:21,0:21:60.20:0,60,940	0/0:15,0:15:42.14:0,42,672	0/0:12,0:12:33.11:0,33,527	0/0:35,0:35:99:0,102,1631	1/1:0,10:10:30.08:332,30,0	0/0:12,0:12:33.11:0,33,527	0/0:14,0:14:42.14:0,42,654	1/1:0,10:10:30.08:339,30,0	0/0:23,0:23:69.24:0,69,1103	0/0:16,0:16:45.15:0,45,719	0/0:20,0:20:60.20:0,60,958
chr10	13565888	.	AT	A	1530.83	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=11.106;DP=505;FS=36.557;HRun=1;HaplotypeScore=72.3835;InbreedingCoeff=0.9994;MQ=77.89;MQ0=0;MQRankSum=-10.743;QD=31.89;ReadPosRankSum=2.840;VQSLOD=1.5369;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,13:13:33.10:408,33,0	0/0:11,0:11:33.11:0,33,526	0/0:14,0:14:42.14:0,42,666	0/0:20,1:19:43.38:0,43,641	0/0:20,0:20:51.17:0,51,812	0/0:17,0:17:48.15:0,48,744	0/0:27,0:27:75.26:0,75,1196	0/0:24,0:24:67.46:0,67,1035	0/0:13,0:13:39.13:0,39,621	0/0:22,0:22:66.18:0,66,1027	0/0:17,0:17:48.16:0,48,765	1/1:0,15:15:45.14:554,45,0	0/0:17,0:17:48.16:0,48,762	0/0:12,0:12:33.11:0,33,526	0/0:16,0:16:48.15:0,48,741	0/0:16,0:16:48.16:0,48,763	0/0:39,0:38:99:0,117,1818	0/0:21,0:21:63.21:0,63,997	0/0:15,0:15:45.14:0,45,684	0/0:12,0:12:36.12:0,36,575	0/0:36,0:36:99:0,108,1725	1/1:0,10:10:30.09:361,30,0	0/0:13,0:13:36.11:0,36,552	0/0:16,0:16:48.16:0,48,756	1/1:0,10:10:30.09:368,30,0	0/0:24,0:24:72.11:0,72,1118	0/0:16,0:16:45.14:0,45,695	0/0:18,0:18:54.18:0,54,854
chr10	13566995	.	A	AT	1133.30	PASS	AB=0.838;AC=21;AF=0.404;AN=52;BaseQRankSum=1.153;DP=187;FS=4.948;HRun=0;HaplotypeScore=56.2554;InbreedingCoeff=-0.1462;MQ=62.82;MQ0=0;MQRankSum=-6.390;QD=7.82;ReadPosRankSum=1.689;VQSLOD=3.1669;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:7,3:10:24.05:32,0,24	0/0:3,0:3:4.53:0,5,11	0/0:13,0:11:27.03:0,27,305	0/0:5,0:4:2.87:0,3,37	1/1:1,0:1:0.47:1,0,0	0/1:5,2:7:19.21:76,0,19	0/0:3,1:4:7.49:0,7,27	1/1:23,3:26:7.36:269,7,0	0/0:2,0:2:1.95:0,2,5	0/1:4,1:5:0.28:36,0,0	./.	0/0:1,0:1:2.04:0,2,6	1/1:1,1:2:0.13:20,0,0	0/1:4,1:5:9.71:31,0,10	0/0:6,0:6:12.48:0,12,45	1/1:1,1:2:1.02:38,1,0	0/1:17,6:23:24.92:303,0,25	0/1:11,4:15:48.41:131,0,48	0/0:6,0:6:5.93:0,6,20	0/1:5,1:6:16.57:28,0,17	./.	0/1:5,0:5:6.09:6,0,12	0/0:1,0:1:2.22:0,2,7	0/1:3,1:4:10.54:32,0,11	0/1:10,3:13:8.49:130,0,8	0/1:4,0:4:1.88:6,0,2	0/1:8,1:9:10.57:38,0,11	0/1:5,3:8:10.34:92,0,10
chr10	13568014	.	T	TG	5935.48	PASS	AB=0.671;AC=39;AF=0.696;AN=56;BaseQRankSum=0.289;DP=493;FS=42.237;HRun=9;HaplotypeScore=79.1446;InbreedingCoeff=-0.1145;MQ=83.25;MQ0=0;MQRankSum=-4.610;QD=12.93;ReadPosRankSum=3.696;VQSLOD=1.8299;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:37,0:37:88.63:578,89,0	0/1:4,0:4:18.37:18,0,19	0/0:16,0:16:22.53:0,23,186	0/0:18,0:18:31.33:0,31,237	1/1:2,6:8:11.24:107,11,0	1/1:15,0:15:38.52:260,39,0	1/1:39,0:39:99:696,104,0	1/1:8,4:12:14.87:147,15,0	0/1:4,11:15:2.12:208,0,2	0/1:10,10:20:14.40:263,0,14	1/1:7,0:7:5.33:65,5,0	1/1:24,0:25:68.21:504,68,0	0/1:3,4:7:10.87:118,0,11	1/1:19,1:20:49.58:360,50,0	0/1:5,20:25:21.03:453,0,21	0/1:6,10:16:5:178,0,5	0/1:10,13:22:72.25:195,0,72	0/1:9,12:21:25.56:148,0,26	0/1:9,5:14:52:68,0,52	1/1:6,3:9:3.38:92,3,0	0/1:15,11:26:74.49:168,0,74	1/1:22,0:22:35.41:228,35,0	0/1:1,4:5:16.42:28,0,16	0/1:7,16:23:28.62:231,0,29	1/1:21,0:21:50.07:332,50,0	0/1:17,5:22:11.62:215,0,12	1/1:6,14:20:5.20:244,5,0	1/1:2,1:3:3.01:33,3,0
chr10	13568019	.	G	GT	2164.63	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=-4.673;DP=491;FS=140.001;HRun=0;HaplotypeScore=90.3924;InbreedingCoeff=-0.1202;MQ=78.78;MQ0=0;MQRankSum=-0.499;QD=8.11;ReadPosRankSum=7.258;VQSLOD=0.9178;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:67.53:0,68,263	0/0:3,0:3:7.25:0,7,69	0/0:12,0:12:32.86:0,33,364	0/0:16,0:16:40.97:0,41,534	0/1:8,0:8:2.35:2,0,65	1/1:0,16:16:39.13:556,39,0	1/1:2,39:41:99:1497,105,0	0/1:16,0:16:10.28:10,0,114	0/1:13,0:13:42.08:42,0,44	0/1:20,0:20:18.99:19,0,119	0/1:6,0:6:3.99:4,0,60	0/0:26,0:26:8.11:0,8,104	0/1:8,0:8:9.65:10,0,93	0/0:21,0:21:23.34:0,23,135	0/1:26,0:26:55.11:55,0,132	0/1:14,0:14:18.94:19,0,95	0/1:22,0:21:25.74:26,0,171	0/0:22,0:22:2.84:0,3,204	0/0:13,0:13:20.91:0,21,276	0/0:10,0:10:2.96:0,3,119	0/1:25,0:25:6.40:6,0,210	0/0:21,0:21:15.52:0,16,97	0/1:7,0:7:1.64:2,0,36	0/1:23,0:23:50.90:51,0,134	0/0:20,0:20:26.80:0,27,142	0/0:19,0:19:0.47:0,0,190	0/1:22,0:22:20.55:21,0,154	0/0:3,0:3:1.02:0,1,43
chr10	13568022	.	G	GA	3803.71	PASS	AB=0.994;AC=23;AF=0.411;AN=56;BaseQRankSum=3.540;DP=493;FS=92.854;HRun=0;HaplotypeScore=84.3575;InbreedingCoeff=-0.0418;MQ=78.78;MQ0=0;MQRankSum=-3.211;QD=11.32;ReadPosRankSum=8.641;VQSLOD=0.1651;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,39:39:90.30:1276,90,0	0/0:3,0:3:6.89:0,7,66	0/0:12,0:12:32.97:0,33,368	0/0:15,0:15:39.09:0,39,499	0/1:9,0:9:6.19:6,0,46	0/0:16,0:16:13.25:0,13,60	0/0:41,0:41:67.20:0,67,260	0/0:21,0:21:20.30:0,20,277	0/1:13,0:13:31.65:32,0,46	0/1:17,0:18:43.55:44,0,95	0/1:6,0:6:16.53:17,0,33	1/1:2,25:27:69.21:950,69,0	0/1:7,0:7:14.74:15,0,53	0/0:20,0:20:12.93:0,13,107	0/1:25,0:26:81.13:81,0,99	0/1:14,0:14:17.16:17,0,98	0/1:23,0:22:30.13:30,0,182	0/1:20,0:20:11.28:11,0,139	0/0:17,0:17:31.50:0,32,359	0/0:12,0:12:8.89:0,9,167	0/1:26,0:26:0.56:1,0,242	1/1:0,18:18:36.12:514,36,0	0/1:8,0:8:1.65:2,0,36	0/1:22,0:22:44.20:44,0,135	1/1:0,18:18:51.17:717,51,0	0/1:17,0:17:17.80:18,0,112	0/1:22,0:22:25.37:25,0,124	0/1:3,0:3:4.61:5,0,20
chr10	13568720	.	C	CA	3748.80	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-12.616;DP=599;FS=1.329;HRun=5;HaplotypeScore=56.2115;InbreedingCoeff=0.9987;MQ=84.84;MQ0=0;MQRankSum=-2.781;QD=31.77;ReadPosRankSum=2.551;VQSLOD=4.3103;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,52:58:99:1697,129,0	0/0:12,0:12:30.07:0,30,322	0/0:23,0:23:22.54:0,23,484	0/0:21,0:21:49.17:0,49,518	0/0:18,0:18:39.08:0,39,411	0/0:15,0:15:45.11:0,45,484	0/0:11,0:11:33.08:0,33,355	0/0:20,0:20:48.11:0,48,509	0/0:28,0:28:72.18:0,72,774	0/0:19,0:19:45.11:0,45,484	0/0:15,0:15:39.10:0,39,419	1/1:1,21:22:57.19:750,57,0	0/0:14,0:14:42.07:0,42,433	0/0:23,0:23:63.16:0,63,676	0/0:27,0:27:78.18:0,78,830	0/0:20,0:20:54.14:0,54,580	0/0:37,0:37:72.18:0,72,1081	0/0:21,0:21:57.14:0,57,612	0/0:21,0:21:57.14:0,57,612	0/0:14,0:14:42.09:0,42,443	0/0:16,0:16:42.08:0,42,442	1/1:0,19:19:48.16:632,48,0	0/0:10,0:10:30.05:0,30,312	0/0:28,0:28:78.19:0,78,838	1/1:1,18:19:51.17:671,51,0	0/0:28,0:28:78.20:0,78,838	0/0:25,0:25:69.17:0,69,741	0/0:15,0:15:42.11:0,42,451
chr10	13569790	.	T	TC	19185.30	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=11.203;DP=682;FS=6.980;HRun=0;HaplotypeScore=98.8451;InbreedingCoeff=0.9895;MQ=84.04;MQ0=0;MQRankSum=-2.455;QD=40.65;ReadPosRankSum=3.017;VQSLOD=5.1170;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:56:99:0,169,2304	1/1:1,8:9:21.07:335,21,0	0/0:19,0:19:53.76:0,54,700	0/0:24,0:23:62.84:0,63,789	1/1:1,20:20:57.11:869,57,0	0/0:26,0:26:78.25:0,78,1074	0/0:27,0:27:81.17:0,81,1077	1/1:1,32:34:93.28:1405,93,0	1/1:0,24:24:63.21:1006,63,0	1/1:0,23:24:69.21:1041,69,0	1/1:1,13:14:29.93:417,30,0	0/0:19,0:19:54.11:0,54,707	1/1:0,20:20:54.18:860,54,0	1/1:2,23:25:66.17:1025,66,0	1/1:0,22:22:57.19:911,57,0	1/1:0,23:23:63.21:1006,63,0	1/1:2,48:50:99:1932,123,0	1/1:1,27:28:69.24:1102,69,0	1/1:2,17:19:54.13:793,54,0	1/1:1,20:21:63.12:951,63,0	1/1:1,39:40:99:1678,105,0	0/0:21,0:21:63.20:0,63,863	1/1:1,17:18:48.01:704,48,0	1/1:0,33:33:78.26:1246,78,0	0/0:18,0:18:48.15:0,48,640	1/1:1,26:27:36.44:1130,36,0	1/1:0,15:15:41.63:631,42,0	1/1:0,5:5:9.03:144,9,0
chr10	13569890	.	T	TAGG	4473.28	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-11.293;DP=565;FS=3.659;HRun=0;HaplotypeScore=85.2909;InbreedingCoeff=0.9959;MQ=92.93;MQ0=0;MQRankSum=-0.129;QD=48.10;ReadPosRankSum=2.558;VQSLOD=6.8671;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:13,34:47:96.33:2041,96,0	0/0:7,0:7:18.06:0,18,276	0/0:27,0:27:51.52:0,52,720	0/0:28,0:28:37.16:0,37,552	0/0:18,0:18:48.16:0,48,736	0/0:16,0:16:33.11:0,33,506	0/0:24,0:24:69.21:0,69,1029	0/0:22,0:22:45.14:0,45,670	0/0:15,0:15:36.12:0,36,552	0/0:23,0:23:60.20:0,60,920	0/0:12,0:12:33.11:0,33,506	1/1:1,15:16:42.14:896,42,0	0/0:15,0:15:42.14:0,42,644	0/0:16,0:16:45.15:0,45,690	0/0:20,0:20:48.15:0,48,714	0/0:14,0:14:36.12:0,36,552	0/0:32,0:32:84.27:0,84,1262	0/0:21,0:21:60.20:0,60,920	0/0:16,0:16:30.10:0,30,460	0/0:15,0:15:42.14:0,42,644	0/0:24,0:24:66.22:0,66,1012	1/1:4,7:11:21.07:448,21,0	0/0:20,0:20:51.13:0,51,756	0/0:25,0:25:57.19:0,57,874	1/1:0,19:19:51.18:1088,51,0	0/0:26,0:26:72.24:0,72,1076	0/0:25,0:24:66.21:0,66,990	0/0:10,0:10:27.09:0,27,414
chr10	13570067	.	G	GAA	4138.49	PASS	AB=0.908;AC=41;AF=0.732;AN=56;BaseQRankSum=-3.736;DP=487;FS=9.114;HRun=9;HaplotypeScore=91.7296;InbreedingCoeff=0.4461;MQ=40.86;MQ0=35;MQRankSum=0.544;QD=13.66;ReadPosRankSum=0.780;VQSLOD=1.0862;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:10,0:25:16.49:90,16,0	1/1:3,2:6:10.07:74,10,0	0/0:63,0:7:11.43:0,11,115	0/0:82,0:9:4.02:0,4,93	1/1:18,2:19:26.52:257,27,0	0/0:15,0:15:8.44:0,8,46	0/0:13,0:13:10.72:0,11,51	0/1:13,3:16:1.99:155,0,2	1/1:1,4:5:9.03:138,9,0	1/1:5,4:8:15.05:224,15,0	1/1:10,6:15:17.16:199,17,0	0/0:3,0:10:2.74:0,3,23	1/1:6,0:6:11.40:144,11,0	1/1:4,4:8:12.65:149,13,0	0/1:6,1:7:22.99:38,0,23	1/1:4,9:12:14.41:190,14,0	1/1:17,7:24:30.90:623,31,0	1/1:9,8:15:16.78:201,17,0	0/1:15,3:17:10.13:258,0,10	1/1:11,2:13:20.02:224,20,0	1/1:5,5:10:18.60:198,19,0	0/1:9,0:11:5.44:12,0,5	1/1:10,5:16:19.35:250,19,0	1/1:11,2:12:24.50:218,24,0	0/1:2,0:10:5.32:5,0,23	1/1:13,3:16:4.12:311,4,0	1/1:10,2:12:20.85:135,21,0	1/1:3,4:6:3.48:47,3,0
chr10	13570068	.	AAAAAAAAAG	A	5502.62	PASS	AB=1.000;AC=47;AF=0.839;AN=56;BaseQRankSum=-0.283;DP=478;FS=6.795;HRun=0;HaplotypeScore=123.6406;InbreedingCoeff=0.2608;MQ=40.50;MQ0=35;MQRankSum=1.093;QD=16.57;ReadPosRankSum=4.159;VQSLOD=3.2187;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:25:12.62:186,0,13	1/1:6,0:6:11.87:169,12,0	0/0:64,0:8:12.82:0,13,124	0/0:82,0:9:8.15:0,8,327	1/1:21,0:19:23.17:187,23,0	1/1:4,11:15:18.06:464,18,0	1/1:3,10:13:18.06:499,18,0	0/1:17,0:16:5.53:147,0,6	1/1:5,0:5:8.56:43,9,0	1/1:9,0:8:14:67,14,0	1/1:15,2:15:31.64:388,32,0	0/1:11,0:10:10.17:122,0,10	1/1:6,0:6:11.53:93,12,0	1/1:7,0:7:11.53:96,12,0	1/1:6,0:6:5.89:58,6,0	1/1:12,0:11:14.57:123,15,0	1/1:24,0:24:55.03:490,55,0	1/1:16,0:14:17.49:156,17,0	1/1:17,1:17:0.76:230,1,0	1/1:13,0:12:17.45:129,17,0	1/1:9,0:9:20.51:221,21,0	0/1:11,0:11:28.41:70,0,28	1/1:15,1:16:29.46:366,29,0	1/1:12,0:11:24.95:284,25,0	0/1:10,0:10:1.30:238,0,1	1/1:16,0:15:12.13:315,12,0	1/1:10,0:10:23.91:320,24,0	1/1:7,0:6:5.84:40,6,0
chr10	13570069	.	AAAAAAAAG	A	8923.19	PASS	AB=0.889;AC=50;AF=0.893;AN=56;BaseQRankSum=-1.390;DP=473;FS=1.209;HRun=0;HaplotypeScore=105.1350;InbreedingCoeff=0.5073;MQ=40.57;MQ0=34;MQRankSum=0.072;QD=27.29;ReadPosRankSum=4.097;VQSLOD=4.2504;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:25:32.65:373,33,0	1/1:3,3:6:12.04:273,12,0	0/0:64,0:8:12.98:0,13,181	0/0:82,0:9:8.44:0,8,326	1/1:14,7:19:27.38:360,27,0	1/1:15,0:15:18.06:366,18,0	1/1:13,0:13:18.06:352,18,0	0/1:14,2:15:0.94:290,0,1	1/1:5,0:5:9.03:138,9,0	1/1:9,0:8:15.05:224,15,0	1/1:12,5:15:32.51:499,33,0	1/1:11,0:10:5.04:158,5,0	1/1:5,1:6:12.04:213,12,0	1/1:6,1:7:12.93:217,13,0	1/1:6,0:6:6.02:81,6,0	1/1:11,1:11:15.05:259,15,0	1/1:19,5:24:63.12:1034,63,0	1/1:13,2:14:18.06:339,18,0	0/1:14,2:15:0.93:452,0,1	1/1:11,2:12:22.50:294,22,0	1/1:6,3:9:21.07:404,21,0	1/1:11,0:11:7:136,7,0	1/1:11,4:15:29.59:555,30,0	1/1:8,4:11:27.05:491,27,0	1/1:10,0:10:13.53:301,14,0	1/1:12,4:15:6.67:587,7,0	1/1:4,6:10:24.93:481,25,0	1/1:7,0:6:3.48:47,3,0
chr10	13570079	.	AAAAAAAAGAAAAAAAAAG	A	5396.56	PASS	AB=1.000;AC=32;AF=0.571;AN=56;BaseQRankSum=3.528;DP=449;FS=30.202;HRun=0;HaplotypeScore=164.9143;InbreedingCoeff=0.6422;MQ=38.76;MQ0=33;MQRankSum=-2.031;QD=30.32;ReadPosRankSum=3.957;VQSLOD=2.2889;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:44.16:0,44,1899	1/1:5,0:5:9.02:316,9,0	0/0:64,0:9:16.77:0,17,211	0/0:87,0:11:11.89:0,12,665	0/1:15,0:13:1.77:263,0,2	0/0:14,0:14:24.08:0,24,671	0/0:16,0:16:36.12:0,36,1070	1/1:11,0:9:5.99:212,6,0	0/0:4,0:4:0:0,0,0	0/0:8,0:7:4.26:0,4,39	1/1:15,0:14:16.19:573,16,0	0/0:13,0:12:18.93:0,19,378	1/1:3,0:3:3.01:106,3,0	1/1:5,0:5:2.98:106,3,0	1/1:2,5:7:3.01:144,3,0	1/1:11,0:10:2.96:106,3,0	1/1:21,1:22:17.03:674,17,0	1/1:12,0:11:4.23:209,4,0	0/1:13,0:11:15.65:326,0,16	1/1:8,0:8:4.17:142,4,0	1/1:8,0:8:8.99:317,9,0	0/0:10,0:10:18.03:0,18,403	1/1:11,0:11:15:488,15,0	1/1:11,0:10:11.99:423,12,0	0/0:12,0:12:21.06:0,21,513	1/1:13,0:12:12:425,12,0	1/1:8,0:8:18.06:566,18,0	0/0:9,0:8:9:0,9,165
chr10	13570089	.	AAAAAAAAG	A	7599.18	PASS	AB=1.000;AC=44;AF=0.786;AN=56;BaseQRankSum=2.691;DP=484;FS=2.680;HRun=0;HaplotypeScore=126.5882;InbreedingCoeff=0.2844;MQ=41.16;MQ0=24;MQRankSum=-3.686;QD=24.67;ReadPosRankSum=2.235;VQSLOD=4.5313;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:33:11.30:0,11,509	1/1:2,3:5:12:242,12,0	0/0:60,0:11:12.10:0,12,138	0/0:79,0:13:18.82:0,19,342	1/1:11,6:15:31.80:401,32,0	0/1:17,0:17:69.50:70,0,172	0/1:19,0:19:47.10:47,0,267	1/1:14,2:15:29.31:494,29,0	1/1:6,0:6:6.02:96,6,0	1/1:12,0:11:24.08:379,24,0	1/1:10,7:16:27.09:515,27,0	0/1:10,0:9:23.60:35,0,24	1/1:3,1:4:11.40:181,11,0	1/1:7,1:8:9.03:162,9,0	1/1:6,0:6:3.01:59,3,0	1/1:6,1:6:3.01:75,3,0	1/1:17,5:22:30.10:613,30,0	1/1:7,2:8:15.05:285,15,0	1/1:15,3:16:38.27:652,38,0	1/1:11,2:13:33.01:461,33,0	1/1:7,3:10:18.06:357,18,0	0/1:9,0:9:9.27:9,0,110	1/1:10,5:15:26.88:502,27,0	1/1:8,4:11:24.08:492,24,0	0/1:16,0:16:35.87:36,0,282	1/1:13,4:16:33.10:608,33,0	1/1:9,6:15:36.12:702,36,0	0/1:8,0:7:22.32:127,0,22
chr10	13570097	.	G	GAA	5482.70	PASS	AB=0.983;AC=39;AF=0.696;AN=56;BaseQRankSum=-0.766;DP=422;FS=16.670;HRun=9;HaplotypeScore=96.9887;InbreedingCoeff=0.8389;MQ=52.24;MQ0=16;MQRankSum=-1.868;QD=20.08;ReadPosRankSum=-1.928;VQSLOD=1.8497;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:30:69.15:0,69,757	1/1:4,0:4:9.83:69,10,0	0/0:38,2:10:18.72:0,19,196	0/1:56,0:12:6.09:6,0,119	1/1:8,9:18:40.24:421,40,0	0/0:18,0:18:42.10:0,42,465	0/0:16,0:16:48.10:0,48,540	1/1:4,14:18:46.46:572,46,0	1/1:0,5:6:6.02:96,6,0	1/1:4,8:12:30.10:474,30,0	1/1:12,0:11:26.96:307,27,0	0/0:12,0:11:20.46:0,20,213	1/1:2,2:4:10.21:111,10,0	1/1:1,4:6:7.84:92,8,0	0/0:5,0:5:2.68:0,3,11	1/1:4,0:3:8:72,8,0	1/1:7,7:15:12.89:195,13,0	1/1:8,1:9:18.90:240,19,0	1/1:5,13:17:47.54:628,48,0	1/1:2,13:16:41.12:533,41,0	1/1:8,0:8:19.12:230,19,0	0/0:9,0:9:26.27:0,26,272	1/1:5,7:13:18.76:210,19,0	1/1:4,5:9:19.27:213,19,0	0/0:16,0:17:47.74:0,48,489	1/1:4,8:14:37.54:423,38,0	1/1:6,12:20:30.82:353,31,0	1/1:8,0:8:17.89:238,18,0
chr10	13570197	.	G	GA	583.29	PASS	AB=0.582;AC=6;AF=0.107;AN=56;BaseQRankSum=6.902;DP=512;FS=6.119;HRun=8;HaplotypeScore=89.7367;InbreedingCoeff=0.6668;MQ=57.49;MQ0=9;MQRankSum=0.564;QD=8.84;ReadPosRankSum=0.447;VQSLOD=1.7264;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:10,19:32:8.27:335,0,8	0/0:7,0:7:18.01:0,18,165	0/0:21,0:10:5.84:0,6,110	0/0:15,0:5:9.79:0,10,72	0/0:23,0:24:59.03:0,59,522	0/0:16,1:17:13.35:0,13,365	0/0:17,0:17:42.01:0,42,379	0/0:25,0:23:53.99:0,54,490	0/0:9,0:9:27.01:0,27,247	0/0:25,1:26:28.44:0,28,512	0/0:20,0:20:42:0,42,380	0/1:3,9:12:0.73:107,0,1	0/0:14,0:14:28.41:0,28,266	0/0:11,0:11:33.02:0,33,302	0/0:14,0:14:29.85:0,30,255	0/0:13,0:13:29.99:0,30,269	0/0:38,0:39:93.44:0,93,842	0/0:16,0:16:42.02:0,42,384	0/0:19,0:17:48.02:0,48,435	0/0:20,0:20:45:0,45,407	0/0:16,0:17:43.23:0,43,378	1/1:3,4:7:6.49:68,6,0	0/0:21,0:21:50.98:0,51,455	0/0:18,0:21:44.15:0,44,434	1/1:4,11:15:18.05:200,18,0	0/0:22,0:22:60.03:0,60,549	0/0:16,0:16:42:0,42,379	0/0:19,0:18:45.02:0,45,412
chr10	13572223	.	A	ACT	7612.57	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-5.112;DP=396;FS=0.000;HRun=0;HaplotypeScore=167.9900;InbreedingCoeff=0.7830;MQ=69.67;MQ0=2;MQRankSum=-4.211;QD=21.26;ReadPosRankSum=1.892;VQSLOD=5.2856;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:21,1:22:38.77:438,39,0	1/1:2,0:2:5.23:39,5,0	0/0:20,0:15:7.37:0,7,359	0/0:18,0:12:28.09:0,28,287	1/1:19,0:19:33.18:310,33,0	1/1:11,1:12:27.50:333,27,0	1/1:15,1:16:43.59:428,44,0	1/1:17,0:17:44.73:467,45,0	1/1:10,0:10:2.14:163,2,0	1/1:22,0:22:64.83:560,65,0	1/1:13,1:14:20.30:247,20,0	1/1:7,1:8:20.84:205,21,0	1/1:13,1:15:38.54:338,39,0	1/1:7,0:6:14.93:131,15,0	1/1:13,1:14:27.36:301,27,0	1/1:10,0:10:26.92:233,27,0	1/1:20,1:21:52.49:468,52,0	1/1:21,0:20:52.13:448,52,0	1/1:15,1:16:32.20:346,32,0	1/1:10,0:10:24.04:267,24,0	1/1:8,0:8:16.85:118,17,0	1/1:10,0:10:16.23:183,16,0	1/1:15,1:16:25.03:318,25,0	1/1:15,0:15:20.82:183,21,0	1/1:15,0:15:29.82:312,30,0	1/1:15,0:15:30.26:321,30,0	1/1:13,1:14:37.30:337,37,0	1/1:9,0:9:14.50:117,15,0
chr10	13572224	.	C	CTCT	7127.80	PASS	AB=1.000;AC=51;AF=0.911;AN=56;BaseQRankSum=-4.317;DP=405;FS=0.000;HRun=0;HaplotypeScore=175.5760;InbreedingCoeff=0.6890;MQ=68.45;MQ0=2;MQRankSum=-2.943;QD=19.42;ReadPosRankSum=1.331;VQSLOD=4.4058;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:18,4:22:44.69:569,45,0	1/1:1,0:1:3:29,3,0	0/0:20,0:15:12.72:0,13,419	0/0:17,0:12:23.38:0,23,297	1/1:21,0:21:20.78:239,21,0	1/1:11,0:11:18.61:399,19,0	1/1:15,1:16:41.95:522,42,0	1/1:17,0:17:44:398,44,0	0/1:10,0:10:4.02:128,0,4	1/1:23,0:23:60.46:475,60,0	1/1:14,0:14:8.46:182,8,0	1/1:9,1:10:23.87:264,24,0	1/1:15,0:15:37.70:288,38,0	1/1:6,0:6:14.87:120,15,0	1/1:15,0:15:19.77:225,20,0	1/1:11,0:11:29.74:222,30,0	1/1:21,0:21:38.59:349,39,0	1/1:22,0:21:50.74:393,51,0	1/1:14,0:15:27.29:276,27,0	1/1:10,0:10:23.97:220,24,0	1/1:8,0:8:12.31:87,12,0	1/1:7,4:11:16.67:312,17,0	1/1:15,0:15:13.24:215,13,0	1/1:16,0:16:10.42:123,10,0	1/1:13,3:18:29.81:398,30,0	1/1:14,0:15:27.64:260,28,0	1/1:14,0:14:35.23:288,35,0	1/1:9,0:9:21.28:147,21,0
chr10	13572225	.	T	TC	9280.93	PASS	AB=0.979;AC=48;AF=0.857;AN=56;BaseQRankSum=-5.616;DP=398;FS=7.074;HRun=1;HaplotypeScore=112.4885;InbreedingCoeff=0.3523;MQ=70.76;MQ0=2;MQRankSum=-5.062;QD=25.85;ReadPosRankSum=5.119;VQSLOD=4.4810;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:20,0:20:37.86:214,0,38	1/1:0,1:1:3.01:47,3,0	0/0:21,0:16:34.09:0,34,325	0/0:18,0:12:9.11:0,9,188	1/1:11,11:22:41.77:505,42,0	1/1:5,5:10:26.81:224,27,0	1/1:8,7:15:41.49:370,41,0	1/1:5,12:17:44.95:617,45,0	1/1:2,8:10:4.75:280,5,0	1/1:9,14:23:59.47:702,59,0	1/1:7,7:15:30.58:402,31,0	0/1:10,1:11:8.65:111,0,9	1/1:3,10:13:39.03:510,39,0	1/1:3,3:5:14.93:165,15,0	1/1:6,9:15:11.45:427,11,0	1/1:4,7:11:28.94:361,29,0	1/1:4,15:19:54.05:698,54,0	1/1:9,13:21:56.99:712,57,0	1/1:6,9:15:41.13:476,41,0	1/1:3,11:14:23.95:360,24,0	1/1:4,3:7:11.11:120,11,0	0/1:10,0:10:36.66:108,0,37	1/1:6,9:15:34.84:414,35,0	1/1:10,6:16:19.28:252,19,0	0/1:16,0:16:6.15:156,0,6	1/1:9,9:18:29.95:465,30,0	1/1:8,6:14:38.26:403,38,0	1/1:0,4:4:12.04:181,12,0
chr10	13572227	.	TG	T	5658.44	PASS	AB=0.957;AC=54;AF=0.964;AN=56;BaseQRankSum=-4.401;DP=413;FS=2.100;HRun=1;HaplotypeScore=113.7228;InbreedingCoeff=0.1356;MQ=70.00;MQ0=2;MQRankSum=-4.016;QD=13.70;ReadPosRankSum=1.496;VQSLOD=4.3233;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:21:40.85:196,41,0	1/1:1,0:1:2.99:24,3,0	0/1:19,2:16:33.75:34,0,174	0/1:18,0:12:5.02:5,0,142	1/1:22,1:23:47.49:326,47,0	1/1:10,0:10:27.55:143,28,0	1/1:16,0:16:40.85:207,41,0	1/1:19,0:19:41.17:324,41,0	1/1:11,0:11:24.05:158,24,0	1/1:24,0:24:66.49:454,66,0	1/1:14,2:16:39.31:244,39,0	1/1:11,0:11:25.09:122,25,0	1/1:12,1:13:37.19:214,37,0	1/1:6,0:5:13.15:73,13,0	1/1:15,0:15:34.87:220,35,0	1/1:10,1:11:32.41:213,32,0	1/1:18,2:20:52.11:306,52,0	1/1:22,0:21:57.76:367,58,0	1/1:15,0:15:39.84:241,40,0	1/1:13,1:14:35.46:252,35,0	1/1:10,0:10:16.27:102,16,0	1/1:11,0:11:23.77:115,24,0	1/1:15,0:15:36.40:216,36,0	1/1:15,1:16:25.60:173,26,0	1/1:15,1:16:42.77:246,43,0	1/1:18,1:19:51.44:355,51,0	1/1:14,1:15:39.08:257,39,0	1/1:4,0:4:11.70:69,12,0
chr10	13572239	.	T	TTA	756.77	PASS	AB=1.000;AC=14;AF=0.250;AN=56;BaseQRankSum=0.954;DP=427;FS=26.301;HRun=0;HaplotypeScore=137.4406;InbreedingCoeff=0.0029;MQ=73.08;MQ0=1;MQRankSum=-6.487;QD=4.61;ReadPosRankSum=-3.262;VQSLOD=0.8428;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:18,0:18:44.67:45,0,89	0/0:1,0:1:2.74:0,3,12	0/0:20,0:15:14.41:0,14,271	0/0:16,0:14:29.35:0,29,226	0/0:28,0:28:25.75:0,26,360	1/1:5,5:10:29.91:296,30,0	1/1:10,4:15:41.79:407,42,0	0/0:22,0:22:16.17:0,16,283	0/0:11,0:11:10.16:0,10,91	0/1:22,0:22:7.61:8,0,201	0/1:17,0:17:47.58:48,0,127	0/1:11,0:11:10.72:11,0,75	0/0:15,0:15:16.07:0,16,110	0/0:7,0:6:1.04:0,1,73	0/1:15,0:15:8.49:8,0,106	0/0:12,0:12:31.01:0,31,166	0/0:24,0:24:7.96:0,8,154	0/0:22,0:21:11.84:0,12,149	0/1:19,0:19:5.95:6,0,212	0/0:14,0:14:7.84:0,8,86	0/0:12,0:12:25.52:0,26,164	0/1:9,0:9:9.55:10,0,54	0/0:23,0:23:1.90:0,2,260	0/0:15,0:15:9.35:0,9,106	0/1:13,0:13:36.88:37,0,95	0/0:21,0:21:25.77:0,26,211	0/1:11,0:11:22.78:23,0,25	0/1:4,0:4:12.50:17,0,13
chr10	13572484	.	C	CA	1059.58	PASS	AB=0.806;AC=16;AF=0.286;AN=56;BaseQRankSum=0.375;DP=380;FS=7.726;HRun=13;HaplotypeScore=59.9262;InbreedingCoeff=0.0443;MQ=66.68;MQ0=1;MQRankSum=1.150;QD=5.70;ReadPosRankSum=0.649;VQSLOD=1.6959;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,12:18:12.45:258,12,0	0/0:3,0:3:5.93:0,6,40	0/1:18,0:13:11.57:12,0,54	0/0:12,0:9:5.15:0,5,27	0/1:12,1:15:16.30:16,0,68	0/1:7,16:23:37.25:261,0,37	1/1:3,7:12:0.98:155,1,0	0/1:15,5:21:99:114,0,159	0/0:9,0:9:20.80:0,21,142	0/1:10,1:12:2:2,0,124	0/0:6,0:7:16.90:0,17,109	0/1:6,11:18:17.08:143,0,17	0/0:16,0:17:12.83:0,13,223	0/0:7,0:9:22.09:0,22,136	0/0:9,0:9:22.83:0,23,150	0/0:13,0:14:34.73:0,35,232	0/0:28,0:28:62.21:0,62,431	0/0:20,0:20:29.49:0,29,202	0/0:19,0:19:40.65:0,41,272	0/1:6,2:8:38.50:38,0,45	0/0:6,0:6:11.81:0,12,79	1/1:1,6:7:10.21:78,10,0	0/1:8,1:11:2.88:3,0,71	0/0:7,0:10:15.03:0,15,79	0/1:5,10:15:20.13:118,0,20	0/0:17,0:18:31.66:0,32,207	0/1:7,1:8:18.94:19,0,32	0/0:9,1:11:1.01:0,1,142
chr10	13572864	.	T	TA	6151.29	PASS	AB=0.719;AC=49;AF=0.875;AN=56;BaseQRankSum=-2.028;DP=506;FS=0.000;HRun=13;HaplotypeScore=66.9352;InbreedingCoeff=-0.1254;MQ=68.15;MQ0=1;MQRankSum=1.126;QD=12.16;ReadPosRankSum=2.083;VQSLOD=4.8798;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,2:35:35.09:200,35,0	0/1:4,3:8:8.94:43,0,9	0/1:19,0:15:15.38:17,0,15	0/1:12,0:10:11.37:11,0,32	1/1:11,15:28:30.35:431,30,0	1/1:6,13:19:27.03:251,27,0	1/1:6,17:22:24.03:223,24,0	0/1:10,11:21:20.80:220,0,21	1/1:3,9:13:0.28:133,0,0	1/1:7,14:21:36:321,36,0	1/1:3,15:18:20.35:294,20,0	1/1:3,0:13:20.44:104,20,0	0/1:1,7:8:5.57:96,0,6	0/1:4,9:13:14.12:168,0,14	1/1:4,18:22:33.04:306,33,0	0/1:8,19:27:4.65:389,0,5	1/1:7,13:19:12.46:258,12,0	1/1:5,11:17:3.45:175,3,0	1/1:4,16:20:31.29:411,31,0	1/1:5,9:14:16.33:197,16,0	1/1:3,14:17:27.03:251,27,0	1/1:2,0:9:14.24:72,14,0	1/1:6,12:18:26.24:226,26,0	1/1:10,11:19:20.46:308,20,0	1/1:2,1:16:25.96:151,26,0	1/1:7,13:20:22.86:304,23,0	1/1:8,12:20:23.48:340,23,0	1/1:2,11:13:27.03:251,27,0
chr10	13573453	.	T	TA	11567.15	PASS	AB=0.976;AC=54;AF=0.964;AN=56;BaseQRankSum=-2.421;DP=576;FS=6.018;HRun=10;HaplotypeScore=116.9245;InbreedingCoeff=0.0371;MQ=67.56;MQ0=1;MQRankSum=-2.928;QD=20.08;ReadPosRankSum=2.767;VQSLOD=4.4785;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,0:32:59.34:314,59,0	1/1:1,3:4:9.02:95,9,0	0/1:19,0:15:14.19:14,0,49	0/1:13,0:9:8.52:13,0,9	1/1:10,23:33:58.62:751,59,0	1/1:1,21:22:54.13:570,54,0	1/1:3,17:20:36.09:381,36,0	1/1:13,15:27:63.11:634,63,0	1/1:3,14:17:44.96:441,45,0	1/1:11,18:29:68.44:661,68,0	1/1:11,14:24:51.48:505,51,0	1/1:2,0:24:48.42:249,48,0	1/1:5,10:15:36.03:367,36,0	1/1:10,16:25:59.88:593,60,0	1/1:5,19:24:66.12:680,66,0	1/1:5,17:22:54.13:565,54,0	1/1:7,11:18:36.09:381,36,0	1/1:4,7:11:27.07:286,27,0	1/1:6,10:16:30.07:317,30,0	1/1:8,21:29:72.07:725,72,0	1/1:9,2:11:12.02:120,12,0	1/1:4,1:17:31.75:188,32,0	1/1:8,17:25:59.84:581,60,0	1/1:4,8:12:23.97:236,24,0	1/1:2,1:20:45.45:227,45,0	1/1:11,15:26:54.12:557,54,0	1/1:5,16:21:63.11:643,63,0	1/1:9,7:16:48.05:475,48,0
chr10	13573469	.	A	AT	12847.52	PASS	AB=1.000;AC=41;AF=0.732;AN=56;BaseQRankSum=-3.134;DP=589;FS=0.000;HRun=7;HaplotypeScore=118.3780;InbreedingCoeff=0.8652;MQ=63.52;MQ0=0;MQRankSum=-7.813;QD=28.87;ReadPosRankSum=-3.178;VQSLOD=2.4979;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:48.06:0,48,464	1/1:0,3:3:9.03:109,9,0	0/1:15,0:13:32.38:32,0,44	0/0:4,1:5:3:0,3,29	1/1:3,29:32:90.19:1054,90,0	0/0:25,0:25:66.08:0,66,630	0/0:22,0:22:54.09:0,54,521	1/1:8,28:35:84.22:980,84,0	1/1:6,17:23:51.14:603,51,0	1/1:3,24:27:72.22:869,72,0	1/1:2,19:21:54.17:652,54,0	0/0:24,0:24:54.08:0,54,519	1/1:3,14:17:39.12:471,39,0	1/1:3,24:27:69.21:833,69,0	1/1:2,28:30:75.22:895,75,0	1/1:1,19:20:54.17:651,54,0	1/1:5,12:17:39.08:454,39,0	1/1:3,7:10:24.03:273,24,0	1/1:4,15:19:48.14:572,48,0	1/1:2,32:34:93.29:1123,93,0	1/1:2,7:9:18.06:217,18,0	0/0:16,0:16:42.05:0,42,400	1/1:1,21:22:57.13:672,57,0	1/1:0,12:12:24.07:290,24,0	0/0:27,0:27:72.11:0,72,695	1/1:6,22:28:66.14:767,66,0	1/1:3,26:29:78.23:931,78,0	1/1:2,11:13:33.10:399,33,0
chr10	13573584	.	CTCCT	C	18170.99	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=16.453;DP=762;FS=5.072;HRun=0;HaplotypeScore=134.5682;InbreedingCoeff=0.9802;MQ=67.36;MQ0=4;MQRankSum=-4.619;QD=35.35;ReadPosRankSum=5.514;VQSLOD=4.8160;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:56:99:0,150,3622	1/1:0,7:7:9.03:162,9,0	0/0:37,0:32:76.21:0,76,1719	0/0:32,0:27:25.44:0,25,1134	1/1:5,26:31:60.12:995,60,0	0/0:22,0:22:63.20:0,63,1520	0/0:25,0:25:69.23:0,69,1705	1/1:6,19:25:54.14:847,54,0	1/1:5,22:27:48.16:843,48,0	1/1:2,26:27:75.12:1163,75,0	1/1:3,21:24:48.16:862,48,0	0/0:28,0:28:78.27:0,78,1990	1/1:2,19:20:29.10:839,29,0	1/1:5,19:23:29.89:537,30,0	1/1:3,30:33:72.25:1274,72,0	1/1:4,30:33:72.25:1290,72,0	1/1:2,23:25:45.15:808,45,0	1/1:4,13:16:39.13:686,39,0	1/1:2,16:18:45.10:686,45,0	1/1:2,31:33:81.11:1319,81,0	1/1:3,47:50:90.31:1615,90,0	0/0:28,0:28:72.23:0,72,1735	1/1:7,16:23:35.97:646,36,0	1/1:2,30:32:68.97:1238,69,0	0/0:20,0:20:57.20:0,57,1392	1/1:3,27:30:81.24:1377,81,0	1/1:2,26:28:47.45:822,47,0	1/1:0,4:4:9.03:161,9,0
chr10	13574475	.	C	CA	119.36	PASS	AC=14;AF=1.000;AN=14;DP=12;FS=0.000;HRun=0;HaplotypeScore=12.0114;MQ=53.67;MQ0=0;QD=10.85;VQSLOD=3.2036;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,0:1:2.99:24,3,0	1/1:0,1:1:2.84:14,3,0	./.	./.	./.	./.	./.	./.	1/1:2,0:2:5.99:48,6,0	1/1:1,0:1:3:27,3,0	./.	./.	./.	1/1:0,2:2:2.84:14,3,0	./.	./.	1/1:2,0:2:2.99:23,3,0	./.	./.	1/1:1,1:2:5.84:39,6,0	./.	./.	./.	./.	./.	./.	./.	./.
chr10	13574639	.	GA	G	429.85	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=4.663;DP=464;FS=7.961;HRun=8;HaplotypeScore=47.1238;InbreedingCoeff=0.9660;MQ=72.43;MQ0=1;MQRankSum=0.361;QD=19.54;ReadPosRankSum=1.529;VQSLOD=2.9318;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:78.22:0,78,929	0/0:12,0:12:36.11:0,36,433	0/0:14,0:13:24.02:0,24,243	0/0:12,1:12:15.81:0,16,134	0/0:33,0:33:90.23:0,90,1043	1/1:1,13:14:36.06:348,36,0	1/1:1,7:8:21.03:203,21,0	0/0:26,0:26:63.18:0,63,749	0/0:15,0:15:41.99:0,42,474	0/0:21,0:21:57.17:0,57,688	0/0:24,0:24:66.20:0,66,797	0/0:12,0:12:33.10:0,33,399	0/0:9,0:9:24.07:0,24,290	0/0:10,0:10:24.07:0,24,290	0/0:13,0:13:39.12:0,39,470	0/0:15,0:15:45.13:0,45,532	0/0:29,0:29:75.22:0,75,895	0/0:11,0:11:30.09:0,30,362	0/0:17,0:17:45.11:0,45,512	0/0:21,0:21:63.19:0,63,756	0/0:8,0:8:21.06:0,21,254	0/0:4,0:4:12.04:0,12,141	0/0:20,0:20:51.13:0,51,594	0/0:6,0:6:18.04:0,18,206	0/0:23,0:22:57.10:0,57,661	0/0:15,0:15:42.13:0,42,507	0/0:24,0:24:66.20:0,66,792	0/0:15,0:15:45.14:0,45,544
chr10	13574980	.	CG	C	2329.74	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=12.644;DP=629;FS=10.309;HRun=4;HaplotypeScore=67.4722;InbreedingCoeff=0.9912;MQ=81.12;MQ0=0;MQRankSum=-3.494;QD=28.07;ReadPosRankSum=0.793;VQSLOD=2.6506;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,49:50:99:1529,129,0	0/0:14,0:14:39.13:0,39,546	0/0:32,0:32:92.94:0,93,1210	0/0:23,0:23:44.72:0,45,841	0/0:30,0:30:81.26:0,81,1115	0/0:27,0:27:78.26:0,78,1091	0/0:18,0:18:54.18:0,54,754	0/0:35,0:35:96.30:0,96,1296	0/0:18,0:18:51.16:0,51,691	0/0:18,0:18:51.17:0,51,709	0/0:22,0:22:60.20:0,60,840	1/1:1,13:14:39.12:467,39,0	0/0:20,0:20:57.19:0,57,793	0/0:19,0:19:57.16:0,57,763	0/0:23,0:22:66.21:0,66,908	0/0:21,0:21:57.19:0,57,796	0/0:28,0:27:81.27:0,81,1134	0/0:20,0:20:54.16:0,54,737	0/0:17,0:17:51.17:0,51,711	0/0:22,0:22:57.18:0,57,775	0/0:30,0:30:84.18:0,84,1076	1/1:0,11:11:32.97:347,33,0	0/0:18,0:18:54.16:0,54,735	0/0:36,0:35:96.31:0,96,1328	1/1:0,8:8:12.04:144,12,0	0/0:20,0:20:60.19:0,60,825	0/0:24,0:24:66.13:0,66,856	0/0:11,0:11:33.08:0,33,426
chr10	13575097	.	C	CT	5293.43	PASS	AB=0.781;AC=47;AF=0.870;AN=54;BaseQRankSum=-4.769;DP=474;FS=3.840;HRun=13;HaplotypeScore=56.9993;InbreedingCoeff=0.1348;MQ=69.71;MQ0=6;MQRankSum=2.328;QD=11.84;ReadPosRankSum=3.874;VQSLOD=4.8206;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:15:5.64:22,6,0	1/1:1,7:8:11.15:134,11,0	0/0:24,0:12:7.95:0,8,70	0/1:18,0:11:10.34:15,0,10	1/1:7,15:22:28.17:327,28,0	1/1:2,13:16:3.43:170,3,0	1/1:4,2:7:3:28,3,0	1/1:13,17:31:2.77:328,3,0	1/1:9,15:24:20.85:316,21,0	1/1:7,9:15:32.96:291,33,0	1/1:6,16:22:2.58:334,3,0	0/1:8,0:7:0:0,0,0	1/1:2,11:13:21.02:195,21,0	0/1:5,5:10:27.38:66,0,27	1/1:1,16:18:35.88:320,36,0	1/1:4,13:17:9.47:230,9,0	1/1:4,22:29:56.58:489,57,0	1/1:5,16:21:42.05:390,42,0	1/1:6,12:16:10.06:273,10,0	1/1:8,15:24:4.91:283,5,0	./.	1/1:6,0:5:1.77:4,2,0	1/1:4,4:8:6.01:56,6,0	1/1:5,10:15:21.02:195,21,0	1/1:14,0:13:8.48:41,8,0	1/1:6,23:30:59.59:490,60,0	0/1:10,12:23:25.84:200,0,26	0/1:4,8:11:5.57:96,0,6
chr10	13576622	.	C	CA	54.22	PASS	AB=0.928;AC=6;AF=0.107;AN=56;BaseQRankSum=3.010;DP=453;FS=10.107;HRun=0;HaplotypeScore=120.4455;InbreedingCoeff=-0.1313;MQ=59.05;MQ0=16;MQRankSum=-1.001;QD=0.60;ReadPosRankSum=-3.559;VQSLOD=0.2572;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:66.19:0,66,819	0/0:6,0:6:14.93:0,15,143	0/0:24,0:17:48.15:0,48,658	0/0:29,0:24:69.19:0,69,930	0/1:17,3:19:24.54:25,0,518	0/1:6,3:9:55.37:55,0,192	0/1:15,1:16:17.45:17,0,403	0/1:19,0:19:1.38:1,0,608	0/0:13,0:13:12:0,12,131	0/0:15,1:15:4.54:0,5,406	0/0:13,1:13:26.95:0,27,292	0/0:16,0:16:46.90:0,47,452	0/1:9,0:9:43.24:56,0,43	0/0:14,0:14:23.85:0,24,215	0/0:16,0:16:11.91:0,12,102	0/1:15,0:15:15.11:15,0,164	0/0:12,0:12:11.80:0,12,108	0/0:7,1:7:5.77:0,6,31	0/0:6,1:6:12.51:0,13,167	0/0:19,0:18:35.85:0,36,340	0/0:16,1:16:32.79:0,33,408	0/0:20,0:20:48.05:0,48,607	0/0:14,1:14:11.80:0,12,131	0/0:17,0:17:8.93:0,9,80	0/0:13,0:13:33.10:0,33,400	0/0:21,0:21:60.09:0,60,822	0/0:31,1:30:34.35:0,34,265	0/0:7,0:7:11.92:0,12,86
chr10	13576625	.	A	AATACACACACAC	25505.56	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-0.362;DP=704;FS=16.178;HRun=0;HaplotypeScore=264.5893;InbreedingCoeff=0.7304;MQ=50.59;MQ0=18;MQRankSum=-5.891;QD=39.36;ReadPosRankSum=1.672;VQSLOD=3.1254;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:30:29.38:401,29,0	1/1:6,2:9:15.01:506,15,0	0/0:25,0:17:38.98:0,39,401	0/0:30,0:25:35.27:0,35,716	1/1:30,0:28:35.98:894,36,0	1/1:24,0:22:18.06:799,18,0	1/1:19,0:19:31.56:538,32,0	1/1:37,0:37:94.08:2128,94,0	1/1:10,10:25:14.75:739,15,0	1/1:29,0:28:66.57:1547,67,0	1/1:10,8:21:17.69:832,18,0	1/1:24,0:29:38.79:1183,39,0	1/1:9,7:20:27.09:1440,27,0	1/1:9,8:23:27.07:1337,27,0	1/1:6,10:24:15.05:723,15,0	1/1:10,6:24:18.06:958,18,0	1/1:10,10:22:23.11:1118,23,0	1/1:5,6:12:1.14:401,1,0	1/1:10,0:9:27.02:622,27,0	1/1:11,12:28:27.09:1507,27,0	1/1:20,0:19:20.89:334,21,0	1/1:34,0:33:51.04:900,51,0	1/1:9,9:27:3.02:187,3,0	1/1:14,9:32:6.33:370,6,0	1/1:16,0:17:9.02:165,9,0	1/1:13,20:39:97.58:2343,98,0	1/1:9,20:37:54.19:2789,54,0	1/1:2,4:9:12.04:745,12,0
chr10	13576674	.	TTATATATACATATACA	T	6075.24	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=10.542;DP=628;FS=9.755;HRun=0;HaplotypeScore=296.6395;InbreedingCoeff=0.9895;MQ=58.64;MQ0=12;MQRankSum=-10.359;QD=75.00;ReadPosRankSum=-1.926;VQSLOD=2.6203;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,13:23:36.07:1481,36,0	0/0:8,0:8:15.05:0,15,1114	0/0:13,0:8:14.73:0,15,521	0/0:19,0:17:26.97:0,27,754	0/0:20,0:18:39.12:0,39,2668	0/0:26,0:26:37.54:0,38,2835	0/0:14,0:14:36.12:0,36,2294	0/0:44,0:44:99:0,114,5579	0/0:22,0:21:33.58:0,34,2507	0/0:29,0:28:69.22:0,69,3843	0/0:17,0:16:30.57:0,31,2333	1/1:4,14:21:45.15:1853,45,0	0/0:23,0:23:39.13:0,39,2939	0/0:24,0:24:42.62:0,43,2995	0/0:31,0:31:60.01:0,60,4246	0/0:24,0:23:39.13:0,39,2979	0/0:19,0:18:33.11:0,33,2362	0/0:18,0:17:45.15:0,45,3188	0/0:23,0:22:54.19:0,54,3539	0/0:24,0:24:36.12:0,36,2539	0/0:14,0:14:30.10:0,30,2064	1/1:4,18:25:51.04:1728,51,0	0/0:22,0:21:28.04:0,28,1844	0/0:29,0:28:43.09:0,43,2982	1/1:2,9:12:27.09:1013,27,0	0/0:31,0:31:83.71:0,84,4781	0/0:32,0:30:57.15:0,57,3566	0/0:21,0:20:54.19:0,54,3590
chr10	13576739	.	T	TG	3067.05	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=12.046;DP=713;FS=9.889;HRun=2;HaplotypeScore=98.6171;InbreedingCoeff=0.9999;MQ=81.26;MQ0=0;MQRankSum=-6.870;QD=32.63;ReadPosRankSum=1.716;VQSLOD=2.7890;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,27:28:72.24:1035,72,0	0/0:12,0:12:36.11:0,36,443	0/0:28,0:28:65.31:0,65,749	0/0:25,0:25:75.23:0,75,915	0/0:26,0:26:75.22:0,75,916	0/0:20,0:20:60.19:0,60,743	0/0:25,0:25:75.24:0,75,928	0/0:22,0:22:63.16:0,63,764	0/0:25,0:25:72.23:0,72,889	0/0:28,0:28:84.26:0,84,1042	0/0:23,0:23:69.22:0,69,855	1/1:2,22:24:60.20:856,60,0	0/0:16,0:16:42.13:0,42,516	0/0:30,0:30:90.27:0,90,1096	0/0:37,0:37:99:0,102,1260	0/0:29,0:29:78.24:0,78,966	0/0:21,0:21:60.19:0,60,743	0/0:32,0:32:93.25:0,93,1132	0/0:28,0:28:81.25:0,81,992	0/0:21,0:21:60.16:0,60,743	0/0:31,0:31:87.27:0,87,1079	1/1:4,22:26:54.18:776,54,0	0/0:20,0:20:60.19:0,60,740	0/0:29,0:29:81.25:0,81,1004	1/1:1,15:16:39.13:561,39,0	0/0:36,0:36:99:0,105,1284	0/0:34,0:33:99:0,99,1219	0/0:21,0:21:60.17:0,60,729
chr10	13576991	.	G	GT	509.54	PASS	AB=0.823;AC=7;AF=0.125;AN=56;BaseQRankSum=6.452;DP=477;FS=6.121;HRun=3;HaplotypeScore=134.3382;InbreedingCoeff=0.1968;MQ=65.46;MQ0=2;MQRankSum=-3.880;QD=5.60;ReadPosRankSum=-1.009;VQSLOD=-0.0326;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:13,13:26:13.51:258,0,14	0/0:7,0:7:20.09:0,20,111	0/0:18,0:17:47.31:0,47,463	0/0:37,0:26:58.54:0,59,667	0/0:8,0:8:19.69:0,20,98	0/0:23,0:23:41.69:0,42,185	0/1:25,0:25:21.22:21,0,155	0/0:21,0:21:44.38:0,44,186	0/0:12,0:12:33.65:0,34,171	0/0:24,0:24:57.19:0,57,265	0/1:7,0:7:9.80:10,0,54	0/1:8,6:14:21.09:117,0,21	0/0:8,0:8:18.13:0,18,90	0/0:17,0:17:41.58:0,42,206	0/0:20,0:20:51.48:0,51,218	0/0:14,0:14:35.52:0,36,154	0/0:27,0:27:73.01:0,73,356	0/0:21,0:21:53.19:0,53,260	0/0:19,0:19:44.50:0,45,224	0/0:17,0:17:48.45:0,48,259	0/0:20,0:20:30.83:0,31,207	1/1:9,1:10:20.48:175,20,0	0/0:7,0:7:16.96:0,17,87	0/0:24,0:24:37.74:0,38,247	0/1:6,3:9:32.70:62,0,33	0/0:15,0:15:41.24:0,41,192	0/0:8,0:8:19.18:0,19,83	0/0:18,0:18:50.22:0,50,233
chr10	13577186	.	T	TTTC	1249.59	PASS	AC=40;AF=0.769;AN=52;BaseQRankSum=-3.550;DP=133;FS=8.154;HRun=0;HaplotypeScore=62.9784;InbreedingCoeff=0.5660;MQ=46.79;MQ0=1;MQRankSum=-1.890;QD=12.50;ReadPosRankSum=-1.733;VQSLOD=1.8461;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:26.16:0,26,128	1/1:1,0:1:2.68:11,3,0	0/0:6,0:4:4.25:0,4,30	0/0:8,0:5:8.73:0,9,65	1/1:10,0:10:3.23:93,3,0	1/1:2,0:2:6.02:77,6,0	1/1:5,0:4:6.02:79,6,0	1/1:5,0:4:2.98:21,3,0	1/1:5,0:5:8.79:55,9,0	1/1:7,0:6:14.93:138,15,0	1/1:6,0:6:12.63:79,13,0	0/0:1,0:1:2.97:0,3,20	1/1:1,0:1:2.88:15,3,0	1/1:4,0:4:5.74:30,6,0	1/1:3,0:3:8.46:45,8,0	1/1:6,0:6:13.09:85,13,0	1/1:7,0:5:11.34:59,11,0	./.	1/1:1,4:5:12.03:166,12,0	1/1:11,0:11:24.62:180,25,0	./.	0/0:2,0:2:5.77:0,6,31	1/1:4,0:4:7.54:75,8,0	1/1:4,0:3:5.25:23,5,0	0/0:3,0:2:4.44:0,4,13	1/1:5,0:5:11.52:74,12,0	1/1:7,0:7:11.27:72,11,0	1/1:1,0:1:2.99:24,3,0
chr10	13577190	.	TTC	T	543.49	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=2.640;DP=139;FS=7.179;HRun=0;HaplotypeScore=60.6525;InbreedingCoeff=0.4985;MQ=48.50;MQ0=1;MQRankSum=-1.114;QD=23.63;ReadPosRankSum=0.852;VQSLOD=3.8853;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,10:10:30.10:446,30,0	0/0:1,0:1:3.01:0,3,43	0/1:7,0:5:6.29:6,0,195	0/0:6,0:3:9.03:0,9,161	0/0:10,0:10:14.88:0,15,221	0/0:2,0:2:6.02:0,6,107	0/0:5,0:4:9.03:0,9,162	0/0:6,0:5:9.02:0,9,143	0/0:5,0:5:9.02:0,9,139	0/0:9,0:8:19.16:0,19,245	0/0:6,0:6:15.05:0,15,242	1/1:0,1:1:3.01:45,3,0	0/0:1,0:1:3.01:0,3,58	0/0:4,0:4:9.03:0,9,163	0/0:3,0:3:9.03:0,9,157	0/0:7,0:7:21.05:0,21,315	0/0:9,0:7:14.22:0,14,200	0/0:2,0:2:5.60:0,6,42	0/0:6,0:5:15.05:0,15,255	0/0:11,0:11:30.09:0,30,502	0/0:1,0:1:3.01:0,3,58	1/1:0,2:2:6.02:91,6,0	0/0:4,0:4:12.03:0,12,195	0/0:6,0:5:6.37:0,6,106	1/1:0,3:2:6.02:91,6,0	0/0:5,0:5:15.05:0,15,281	0/0:6,0:6:15.05:0,15,242	0/0:1,0:1:3.01:0,3,58
chr10	13577196	.	T	TTC	1030.07	PASS	AB=1.000;AC=36;AF=0.667;AN=54;BaseQRankSum=-0.945;DP=137;FS=1.656;HRun=0;HaplotypeScore=64.3166;InbreedingCoeff=0.3026;MQ=37.11;MQ0=1;MQRankSum=-1.419;QD=9.81;ReadPosRankSum=3.151;VQSLOD=3.2334;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:25.27:0,25,148	1/1:1,0:1:2.97:20,3,0	0/0:6,0:3:2.70:0,3,29	0/0:6,0:3:8.96:0,9,73	1/1:10,0:10:1.48:73,1,0	1/1:0,2:2:6.02:115,6,0	1/1:1,4:4:6.02:115,6,0	0/1:2,0:2:10.19:14,0,10	1/1:5,0:5:8.67:47,9,0	0/1:9,0:8:0.10:86,0,0	1/1:6,0:6:11.15:73,11,0	0/0:1,0:1:2.84:0,3,14	1/1:1,0:1:2.90:16,3,0	1/1:4,0:4:4.67:32,5,0	1/1:3,0:3:8.88:57,9,0	1/1:7,0:7:2.94:72,3,0	1/1:9,0:7:9.63:59,10,0	0/1:2,0:2:3.21:3,0,11	0/1:5,0:4:5.60:103,0,6	0/1:11,0:11:7.97:92,0,8	./.	0/0:4,0:4:11.80:0,12,84	1/1:5,0:5:5.80:42,6,0	1/1:7,0:6:7.28:31,7,0	0/0:4,0:3:6.22:0,6,31	1/1:4,0:4:11.73:76,12,0	0/1:6,0:6:2.95:36,0,3	1/1:1,0:1:2.99:24,3,0
chr10	13577197	.	T	TC	728.85	PASS	AB=0.928;AC=34;AF=0.630;AN=54;BaseQRankSum=-1.486;DP=136;FS=3.645;HRun=0;HaplotypeScore=63.4273;InbreedingCoeff=0.2556;MQ=36.89;MQ0=1;MQRankSum=-0.312;QD=7.15;ReadPosRankSum=3.563;VQSLOD=2.9342;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:30.14:0,30,154	1/1:1,0:1:2.68:11,3,0	0/0:6,0:3:7.82:0,8,57	0/0:6,0:3:8.95:0,9,69	1/1:10,0:10:4.30:55,4,0	1/1:2,0:2:5.91:39,6,0	1/1:4,0:3:5.92:39,6,0	0/1:2,0:2:9.68:14,0,10	1/1:5,0:5:8.58:44,9,0	0/1:8,1:8:7.01:78,0,7	1/1:5,1:6:11.14:54,11,0	0/0:1,0:1:2.37:0,2,8	1/1:1,0:1:2.84:14,3,0	0/1:4,0:4:10.01:21,0,10	1/1:3,0:3:8.40:42,8,0	1/1:5,2:7:0.34:67,0,0	1/1:9,0:7:7.66:50,8,0	0/0:2,0:2:2.87:0,3,19	0/1:5,0:4:8.81:102,0,9	0/1:10,1:11:28.74:54,0,29	./.	0/0:4,0:4:11.29:0,11,56	1/1:5,0:5:5.91:39,6,0	1/1:6,1:6:5.20:24,5,0	0/0:4,0:3:6.07:0,6,27	1/1:4,0:4:11.84:79,12,0	0/1:4,2:6:5.57:41,0,6	1/1:1,0:1:2.99:24,3,0
chr10	13577209	.	TTACTTTAC	T	1437.30	PASS	AB=1.000;AC=31;AF=0.674;AN=46;BaseQRankSum=3.940;DP=126;FS=2.086;HRun=0;HaplotypeScore=70.1947;InbreedingCoeff=-0.1666;MQ=48.09;MQ0=2;MQRankSum=-1.203;QD=13.69;ReadPosRankSum=3.707;VQSLOD=1.8588;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:2,4:6:18.06:394,18,0	1/1:1,0:1:2.98:22,3,0	0/1:5,0:3:23.05:28,0,23	0/0:6,0:3:3.01:0,3,52	0/1:10,0:10:47.25:100,0,47	0/0:3,0:3:0:0,0,0	0/0:3,0:2:0:0,0,0	./.	1/1:5,0:5:3:26,3,0	0/1:7,0:6:17.55:130,0,18	0/1:6,0:6:3.14:3,0,31	1/1:0,1:1:3.01:74,3,0	./.	./.	0/1:3,0:3:15.26:15,0,29	0/1:9,0:8:16.68:52,0,17	0/1:9,0:7:27.09:66,0,27	1/1:2,0:2:3.01:56,3,0	./.	1/1:11,0:11:5.47:60,5,0	./.	1/1:4,0:4:9.03:138,9,0	0/1:5,0:5:50.43:50,0,57	1/1:7,0:6:7.97:95,8,0	1/1:1,2:3:9.03:177,9,0	1/1:4,0:4:3:27,3,0	0/1:6,0:6:8.53:9,0,31	1/1:1,0:1:3.01:40,3,0
chr10	13577210	.	TAC	T	1589.56	PASS	AC=42;AF=0.955;AN=44;BaseQRankSum=1.674;DP=76;FS=9.853;HRun=0;HaplotypeScore=52.6747;InbreedingCoeff=0.1218;MQ=56.93;MQ0=3;MQRankSum=-1.732;QD=22.71;ReadPosRankSum=0.793;VQSLOD=2.8905;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,2:6:18.05:225,18,0	1/1:0,1:1:3.01:33,3,0	1/1:6,0:3:2.47:24,2,0	0/0:6,0:1:2.84:0,3,14	1/1:3,3:7:16.02:125,16,0	1/1:1,0:1:2.96:19,3,0	./.	./.	1/1:0,2:2:3.01:42,3,0	1/1:1,3:5:14.02:142,14,0	1/1:1,2:3:7.53:57,8,0	1/1:1,0:1:3:28,3,0	./.	./.	1/1:1,1:2:4.83:38,5,0	1/1:3,4:6:14.96:146,15,0	1/1:1,4:5:10.46:80,10,0	1/1:0,1:1:3.01:40,3,0	./.	1/1:0,1:2:6.01:60,6,0	./.	1/1:1,2:4:9.03:134,9,0	1/1:2,2:4:9.46:103,9,0	1/1:1,3:3:9.03:106,9,0	1/1:2,0:3:8.96:100,9,0	1/1:0,1:1:3.01:46,3,0	1/1:1,3:4:11.94:106,12,0	1/1:1,0:1:2.98:21,3,0
chr10	13577215	.	TAC	T	1373.62	PASS	AB=0.900;AC=41;AF=0.932;AN=44;BaseQRankSum=0.809;DP=78;FS=24.617;HRun=0;HaplotypeScore=53.6670;InbreedingCoeff=0.0975;MQ=56.19;MQ0=5;MQRankSum=-2.811;QD=19.35;ReadPosRankSum=1.320;VQSLOD=1.8018;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,0:6:18.04:217,18,0	1/1:0,1:1:3.01:33,3,0	0/1:7,0:4:27.99:28,0,43	0/0:7,0:1:3.01:0,3,42	1/1:4,2:6:11.85:104,12,0	1/1:1,0:1:0.89:2,1,0	./.	./.	1/1:1,1:2:3.01:42,3,0	1/1:2,3:5:11.97:132,12,0	1/1:1,2:3:3.01:33,3,0	1/1:1,0:1:3:26,3,0	./.	./.	1/1:1,1:2:3.01:33,3,0	1/1:3,4:6:11.98:121,12,0	1/1:2,3:5:5.98:56,6,0	1/1:0,1:1:3.01:39,3,0	./.	1/1:1,1:2:6.01:58,6,0	./.	1/1:3,0:3:9.03:131,9,0	1/1:2,2:4:6.49:80,6,0	1/1:1,3:3:9.03:104,9,0	1/1:3,0:3:8.96:97,9,0	1/1:0,1:1:3.01:46,3,0	1/1:1,3:4:6.49:66,6,0	1/1:1,0:1:2.98:21,3,0
chr10	13577618	.	TG	T	3472.95	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=12.358;DP=570;FS=18.838;HRun=1;HaplotypeScore=61.3563;InbreedingCoeff=0.9990;MQ=78.07;MQ0=0;MQRankSum=-1.412;QD=38.59;ReadPosRankSum=1.879;VQSLOD=1.8985;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,41:41:99:1629,117,0	0/0:8,0:8:24.08:0,24,372	0/0:16,1:17:49.05:0,49,756	0/0:16,0:16:33.10:0,33,621	0/0:20,0:20:54.17:0,54,836	0/0:30,0:30:90.31:0,90,1436	0/0:15,0:15:45.14:0,45,693	0/0:36,0:36:99:0,108,1724	0/0:16,0:16:48.16:0,48,767	0/0:22,0:22:66.23:0,66,1055	0/0:23,0:23:66.22:0,66,1045	1/1:0,21:21:51.17:713,51,0	0/0:18,0:18:54.18:0,54,853	0/0:21,0:21:63.20:0,63,983	0/0:15,0:15:45.15:0,45,719	0/0:12,0:12:36.12:0,36,573	0/0:25,0:25:72.25:0,72,1145	0/0:17,0:17:51.17:0,51,816	0/0:15,0:15:45.15:0,45,720	0/0:25,0:25:72.24:0,72,1127	0/0:13,0:13:39.13:0,39,624	1/1:0,9:9:27.09:377,27,0	0/0:18,0:18:48.16:0,48,764	0/0:23,0:23:69.16:0,69,1048	1/1:0,19:19:54.18:755,54,0	0/0:35,0:35:99:0,105,1677	0/0:26,0:26:75.24:0,75,1175	0/0:14,0:14:42.13:0,42,640
chr10	13577939	.	CG	C	4396.40	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=15.150;DP=699;FS=14.227;HRun=2;HaplotypeScore=83.4291;InbreedingCoeff=0.9982;MQ=92.99;MQ0=0;MQRankSum=-4.090;QD=36.33;ReadPosRankSum=4.364;VQSLOD=4.0093;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,66:66:99:2450,190,0	0/0:8,0:8:24.05:0,24,333	0/0:35,0:35:99:0,102,1456	0/0:24,0:24:63.18:0,63,907	0/0:25,0:25:75.23:0,75,1081	0/0:22,0:22:66.22:0,66,988	0/0:28,0:28:84.27:0,84,1236	0/0:30,0:30:81.27:0,81,1214	0/0:22,0:22:66.22:0,66,984	0/0:20,0:20:60.14:0,60,835	0/0:14,0:14:36.11:0,36,519	1/1:0,24:24:63.20:817,63,0	0/0:19,0:19:57.19:0,57,850	0/0:26,0:26:75.25:0,75,1104	0/0:20,0:20:57.18:0,57,818	0/0:19,0:19:57.19:0,57,854	0/0:42,0:42:99:0,126,1887	0/0:22,0:22:63.21:0,63,940	0/0:16,0:16:45.12:0,45,649	0/0:21,0:21:60.19:0,60,878	0/0:63,0:63:99:0,184,2698	1/1:0,14:14:39.13:506,39,0	0/0:21,0:21:60.15:0,60,852	0/0:27,0:27:78.26:0,78,1168	1/1:0,17:17:48.16:623,48,0	0/0:26,0:26:75.23:0,75,1081	0/0:21,0:21:63.21:0,63,941	0/0:7,0:7:21.07:0,21,315
chr10	13578640	.	T	TG	1436.97	PASS	AB=0.835;AC=33;AF=0.589;AN=56;BaseQRankSum=-8.531;DP=426;FS=13.925;HRun=11;HaplotypeScore=88.2633;InbreedingCoeff=0.3576;MQ=68.50;MQ0=0;MQRankSum=8.013;QD=5.06;ReadPosRankSum=-2.691;VQSLOD=0.0021;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:2,0:29:40.73:0,41,119	0/1:9,0:9:4.57:41,0,5	0/1:13,0:12:1.64:7,0,2	0/1:5,0:6:7.81:8,0,15	1/1:4,5:9:15.01:145,15,0	0/0:3,0:21:30.55:0,31,90	0/0:6,0:28:38.70:0,39,113	0/1:12,7:19:28.10:57,0,28	0/1:11,2:13:14.43:34,0,14	1/1:6,6:12:12.02:122,12,0	1/1:5,3:8:2.35:10,2,0	0/0:7,0:24:28.51:0,29,84	1/1:9,9:18:14.95:131,15,0	1/1:6,8:14:8.96:89,9,0	1/1:5,11:16:11.95:103,12,0	1/1:3,4:7:6.01:59,6,0	0/1:13,15:28:22.89:158,0,23	1/1:6,16:22:27.05:274,27,0	1/1:6,4:11:11.06:128,11,0	0/1:4,1:5:17.22:19,0,17	1/1:10,5:16:3.01:31,3,0	0/0:3,0:18:26.26:0,26,77	1/1:10,5:15:3.01:30,3,0	1/1:4,9:13:12.02:122,12,0	0/0:1,0:13:22.41:0,22,66	0/1:13,5:18:5.41:52,0,5	0/1:5,6:11:0.03:1,0,0	0/0:8,0:9:19.86:0,20,137
chr10	13579599	.	T	TTA	19096.98	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-4.074;DP=465;FS=1.840;HRun=0;HaplotypeScore=84.4320;InbreedingCoeff=0.9438;MQ=75.27;MQ0=0;MQRankSum=-7.723;QD=43.40;ReadPosRankSum=3.475;VQSLOD=6.6252;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,2:32:87.23:1082,87,0	1/1:0,4:4:9.03:171,9,0	0/0:12,0:12:29.27:0,29,386	0/0:13,0:13:29.62:0,30,355	1/1:0,27:27:77.69:1047,78,0	1/1:0,20:20:51.17:964,51,0	1/1:0,12:12:33.11:625,33,0	1/1:0,33:37:99:1689,111,0	1/1:0,8:8:21.07:396,21,0	1/1:0,18:19:54.16:942,54,0	1/1:0,22:22:66.09:1126,66,0	1/1:0,0:20:42.13:551,42,0	1/1:0,11:11:27.09:510,27,0	1/1:0,10:10:30.10:547,30,0	1/1:0,10:11:27.09:489,27,0	1/1:1,14:17:39.13:739,39,0	1/1:0,16:16:42.11:759,42,0	1/1:0,15:15:36.06:640,36,0	1/1:0,15:16:47.95:865,48,0	1/1:0,24:24:71.96:1146,72,0	1/1:0,4:4:12.04:204,12,0	1/1:1,1:14:35.94:413,36,0	1/1:1,14:16:33.11:624,33,0	1/1:0,11:11:15.05:263,15,0	1/1:0,0:16:48.15:601,48,0	1/1:2,17:19:51.11:834,51,0	1/1:0,25:24:72.25:1359,72,0	1/1:0,14:14:27.09:511,27,0
chr10	13580061	.	A	AAAAT	38685.44	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-10.800;DP=721;FS=7.997;HRun=0;HaplotypeScore=101.8673;InbreedingCoeff=0.9696;MQ=76.72;MQ0=0;MQRankSum=-6.817;QD=59.79;ReadPosRankSum=3.957;VQSLOD=6.6861;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,25:29:72.25:1810,72,0	1/1:2,3:4:6.02:157,6,0	0/0:18,0:18:36.09:0,36,581	0/0:20,0:20:45.15:0,45,789	1/1:3,26:30:75.26:1825,75,0	0/0:19,0:19:54.18:0,54,969	0/0:17,0:17:30.10:0,30,540	1/1:5,30:38:99:2393,102,0	1/1:4,29:35:84.29:2176,84,0	1/1:8,29:38:93.29:2260,93,0	1/1:3,23:26:69.24:1684,69,0	1/1:5,21:26:47.83:1256,48,0	1/1:7,20:28:60.21:1536,60,0	1/1:4,18:23:54.19:1412,54,0	1/1:5,27:34:72.25:1836,72,0	1/1:2,35:38:96.33:2467,96,0	1/1:3,30:34:87.30:2277,87,0	1/1:4,15:19:45.15:1177,45,0	1/1:6,16:23:60.21:1446,60,0	1/1:5,37:43:99:2756,111,0	1/1:3,12:15:24.08:603,24,0	1/1:7,13:21:39.13:1021,39,0	1/1:2,18:21:51.17:1328,51,0	1/1:2,15:17:42.14:1099,42,0	1/1:3,26:30:72.25:1884,72,0	1/1:8,22:30:75.26:1873,75,0	1/1:5,27:31:72.25:1860,72,0	1/1:3,7:11:21.07:550,21,0
chr10	13580309	.	G	GA	559.74	PASS	AB=1.000;AC=6;AF=0.107;AN=56;BaseQRankSum=-5.717;DP=690;FS=0.000;HRun=9;HaplotypeScore=204.7202;InbreedingCoeff=0.6458;MQ=70.82;MQ0=8;MQRankSum=1.823;QD=4.74;ReadPosRankSum=-1.921;VQSLOD=-0.6908;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:30.86:0,31,89	0/0:10,0:10:18.33:0,18,54	0/0:71,0:42:49.64:0,50,424	0/1:66,0:35:16.88:17,0,201	0/0:24,0:24:22.31:0,22,70	1/1:3,16:19:33.78:452,34,0	1/1:3,13:16:21.02:218,21,0	0/1:17,0:17:2.33:2,0,26	0/0:18,0:18:26.48:0,26,77	0/0:27,0:27:38.97:0,39,114	0/0:33,0:33:40.51:0,41,123	0/0:20,0:20:16.37:0,16,47	0/0:16,0:16:25.33:0,25,73	0/0:28,0:28:37.13:0,37,108	0/0:26,0:26:40.74:0,41,119	0/0:16,0:16:22.13:0,22,65	0/0:29,0:29:50.92:0,51,148	0/0:19,0:19:30.55:0,31,89	0/0:18,0:18:20.45:0,20,61	0/0:22,0:22:25.03:0,25,73	0/0:26,0:26:20.36:0,20,59	0/0:25,0:25:23.22:0,23,67	0/0:21,0:21:17.41:0,17,51	0/0:18,0:18:14.73:0,15,43	0/0:13,0:13:18.33:0,18,54	0/0:26,0:26:48.02:0,48,143	0/0:25,0:25:34.33:0,34,101	0/0:7,0:7:10.19:0,10,30
chr10	13580316	.	AAAGG	A	19904.81	PASS	AB=0.548;AC=47;AF=0.839;AN=56;BaseQRankSum=-5.323;DP=672;FS=0.000;HRun=0;HaplotypeScore=162.7417;InbreedingCoeff=0.8932;MQ=70.59;MQ0=9;MQRankSum=-2.664;QD=40.13;ReadPosRankSum=8.580;VQSLOD=4.7004;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,30:30:56.27:1053,56,0	1/1:0,10:10:27.09:519,27,0	0/0:76,0:45:99:0,105,1676	0/0:65,0:33:42.91:0,43,1014	1/1:0,24:24:45.04:789,45,0	0/0:19,0:19:51.13:0,51,923	0/0:16,0:16:27.04:0,27,431	0/1:3,14:17:4.75:540,0,5	1/1:0,19:19:42.14:784,42,0	1/1:1,23:24:69.21:1182,69,0	1/1:0,34:34:66.21:1238,66,0	1/1:0,16:16:30.10:571,30,0	1/1:0,15:15:39.11:747,39,0	1/1:1,24:25:60.20:1124,60,0	1/1:0,24:24:60.21:1153,60,0	1/1:0,15:15:36.12:692,36,0	1/1:0,29:29:75.26:1442,75,0	1/1:0,17:17:45.15:860,45,0	1/1:0,15:15:42.12:646,42,0	1/1:0,22:22:48.07:886,48,0	1/1:1,25:26:33.10:611,33,0	1/1:0,24:24:42.13:771,42,0	1/1:0,22:22:35.84:654,36,0	1/1:0,17:17:24.08:458,24,0	1/1:0,14:14:27.09:519,27,0	1/1:0,26:26:78.25:1399,78,0	1/1:0,24:24:51.15:979,51,0	1/1:0,7:7:15.05:289,15,0
chr10	13581178	.	CG	C	14425.51	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=18.120;DP=645;FS=6.853;HRun=4;HaplotypeScore=140.3878;InbreedingCoeff=0.9983;MQ=82.12;MQ0=0;MQRankSum=-7.028;QD=31.43;ReadPosRankSum=5.042;VQSLOD=3.0732;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:93.29:0,93,1283	1/1:0,8:8:18.06:216,18,0	0/0:20,0:20:57.02:0,57,700	0/0:20,0:20:51.14:0,51,675	1/1:2,25:27:72.17:837,72,0	0/0:14,0:13:42.13:0,42,571	0/0:33,0:33:99:0,99,1332	1/1:5,25:30:75.23:892,75,0	1/1:0,17:17:51.16:610,51,0	1/1:1,30:31:90.23:1053,90,0	1/1:2,19:21:48.09:555,48,0	0/0:24,0:24:72.23:0,72,985	1/1:1,18:19:54.16:641,54,0	1/1:4,20:24:60.18:719,60,0	1/1:2,31:33:93.28:1109,93,0	1/1:1,9:10:27.08:323,27,0	1/1:2,36:38:96.29:1150,96,0	1/1:2,14:16:42.13:503,42,0	1/1:2,16:18:48.13:558,48,0	1/1:2,21:23:63.06:718,63,0	1/1:2,34:36:93.24:1096,93,0	0/0:23,0:23:69.23:0,69,964	1/1:0,13:13:33.06:395,33,0	1/1:0,12:12:29.93:359,30,0	0/0:19,0:19:54.17:0,54,736	1/1:3,27:30:81.19:950,81,0	1/1:0,28:28:78.17:914,78,0	1/1:1,24:25:69.21:827,69,0
chr10	13582983	.	TCTC	T	20779.19	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=18.365;DP=686;FS=1.020;HRun=0;HaplotypeScore=177.5286;InbreedingCoeff=0.9990;MQ=92.13;MQ0=0;MQRankSum=-12.299;QD=42.93;ReadPosRankSum=5.200;VQSLOD=6.1308;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,105,2375	1/1:0,8:8:21.07:358,21,0	0/0:33,0:33:93.32:0,93,2077	0/0:35,0:35:99:0,102,2260	1/1:0,24:24:63.21:1056,63,0	1/1:1,20:21:57.19:954,57,0	1/1:1,27:28:69.24:1175,69,0	1/1:2,27:29:75.25:1250,75,0	1/1:0,24:24:72.25:1227,72,0	1/1:1,28:29:81.26:1354,81,0	1/1:1,16:17:36.12:596,36,0	0/0:37,0:37:99:0,111,2543	1/1:1,18:19:42.14:700,42,0	1/1:0,20:20:54.18:921,54,0	1/1:0,26:25:66.22:1110,66,0	1/1:2,24:26:54.18:921,54,0	1/1:0,19:19:51.17:870,51,0	1/1:1,11:12:33.11:563,33,0	1/1:1,19:20:51.17:853,51,0	1/1:0,22:22:63.22:1074,63,0	1/1:1,38:39:99:1739,102,0	0/0:32,0:32:93.32:0,93,2136	1/1:2,20:22:48.16:818,48,0	1/1:0,21:20:45.15:767,45,0	0/0:28,0:28:84.29:0,84,1938	1/1:0,25:25:69.24:1176,69,0	1/1:0,20:20:48.16:786,48,0	1/1:0,13:13:30.10:512,30,0
chr10	13583072	.	G	GC	8999.28	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=6.152;DP=626;FS=1.338;HRun=1;HaplotypeScore=127.4511;InbreedingCoeff=0.9556;MQ=68.94;MQ0=1;MQRankSum=-6.422;QD=18.52;ReadPosRankSum=1.825;VQSLOD=5.2185;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:48.12:0,48,607	1/1:7,0:7:8.93:85,9,0	0/0:22,0:21:48.01:0,48,415	0/0:12,0:12:4.39:0,4,116	1/1:16,3:22:49.17:465,49,0	1/1:29,0:29:82.43:569,82,0	1/1:22,0:22:51.05:344,51,0	1/1:13,1:14:38.72:339,39,0	1/1:20,2:22:47.14:473,47,0	1/1:15,5:18:45.31:514,45,0	1/1:20,2:22:45.80:400,46,0	0/0:38,0:38:90.30:0,90,860	1/1:20,2:22:35.67:303,36,0	1/1:25,2:27:44.76:488,45,0	1/1:37,4:39:62.84:591,63,0	1/1:25,2:27:46.19:466,46,0	1/1:28,2:28:54.27:559,54,0	1/1:8,0:8:16.28:161,16,0	1/1:18,2:19:38.91:351,39,0	1/1:21,4:26:51.01:538,51,0	1/1:21,1:21:28.43:288,28,0	0/0:18,0:18:47.80:0,48,439	1/1:19,1:20:47.98:515,48,0	1/1:25,1:24:29.66:308,30,0	0/0:16,0:16:41.17:0,41,346	1/1:22,4:25:62.89:643,63,0	1/1:18,2:21:39.06:432,39,0	1/1:10,1:10:20.17:169,20,0
chr10	13583073	.	C	CCT	12625.59	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=2.624;DP=678;FS=4.762;HRun=0;HaplotypeScore=151.9153;InbreedingCoeff=0.9828;MQ=65.32;MQ0=1;MQRankSum=-3.483;QD=23.73;ReadPosRankSum=-0.156;VQSLOD=5.5538;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:37:47.65:0,48,675	1/1:4,6:13:14.83:170,15,0	0/0:19,0:19:48.66:0,49,440	0/0:12,0:12:9.56:0,10,126	1/1:22,4:27:61.04:688,61,0	1/1:15,0:28:78.26:488,78,0	1/1:8,0:21:42.59:273,43,0	1/1:4,13:21:41.68:465,42,0	1/1:11,9:21:50.89:662,51,0	1/1:19,3:20:44.38:514,44,0	1/1:20,2:22:42.21:625,42,0	0/0:35,0:38:95.29:0,95,956	1/1:19,3:24:47.56:452,48,0	1/1:21,8:29:51.86:668,52,0	1/1:33,8:41:84.25:1022,84,0	1/1:20,9:29:50.87:688,51,0	1/1:21,10:30:59.99:846,60,0	1/1:3,9:12:16.17:304,16,0	1/1:18,2:20:44.71:418,45,0	1/1:22,7:29:58.37:886,58,0	1/1:13,8:21:32.97:403,33,0	0/0:17,0:19:47.71:0,48,481	1/1:21,1:24:51.06:751,51,0	1/1:14,9:23:26.83:505,27,0	0/0:18,0:20:43:0,43,400	1/1:26,5:30:64.99:811,65,0	1/1:16,8:24:45.07:700,45,0	1/1:7,4:10:23.94:286,24,0
chr10	13583860	.	CT	C	8681.33	PASS	AB=0.763;AC=42;AF=0.750;AN=56;BaseQRankSum=9.909;DP=467;FS=18.344;HRun=7;HaplotypeScore=84.0589;InbreedingCoeff=0.7764;MQ=58.86;MQ0=11;MQRankSum=-1.743;QD=24.25;ReadPosRankSum=4.464;VQSLOD=3.4764;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:22:59.88:0,60,775	1/1:1,15:15:39.12:460,39,0	0/0:14,0:4:5.03:0,5,30	0/0:19,0:9:9.43:0,9,99	1/1:2,20:19:42.06:479,42,0	1/1:11,0:12:9.42:26,9,0	0/1:18,0:18:7.30:7,0,34	1/1:1,19:20:54.15:630,54,0	1/1:1,8:9:27.05:297,27,0	1/1:3,18:19:54.16:624,54,0	1/1:0,13:13:33.10:387,33,0	0/0:12,0:12:33.08:0,33,404	1/1:0,9:9:27.08:322,27,0	1/1:1,7:8:9.03:108,9,0	1/1:1,23:24:57.04:680,57,0	1/1:1,9:10:24.07:285,24,0	1/1:2,30:30:71.95:825,72,0	1/1:4,18:21:42.09:488,42,0	1/1:4,15:17:39.12:460,39,0	1/1:2,17:18:45.13:530,45,0	0/1:1,9:10:8.54:227,0,9	0/0:21,0:19:37.36:0,37,486	1/1:0,13:13:30.09:358,30,0	1/1:4,16:19:39.12:458,39,0	0/0:17,0:17:48.14:0,48,638	1/1:1,18:17:48.14:569,48,0	1/1:1,12:12:27.08:319,27,0	1/1:2,6:7:12.04:142,12,0
chr10	13583863	.	TTC	T	1970.61	PASS	AB=1.000;AC=43;AF=0.768;AN=56;BaseQRankSum=9.742;DP=466;FS=14.386;HRun=0;HaplotypeScore=114.8950;InbreedingCoeff=0.7165;MQ=55.43;MQ0=12;MQRankSum=0.123;QD=5.49;ReadPosRankSum=5.337;VQSLOD=1.3859;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:23:58.36:0,58,691	1/1:15,0:14:24.21:77,24,0	0/0:13,0:3:4.72:0,5,16	0/0:17,0:7:10.88:0,11,62	1/1:23,0:20:7.83:57,8,0	1/1:2,8:10:22.63:309,23,0	1/1:5,14:18:29.90:370,30,0	1/1:21,0:21:6.72:77,7,0	1/1:9,0:9:10.81:38,11,0	1/1:21,0:19:38.84:163,39,0	1/1:13,0:13:25.29:100,25,0	0/0:12,0:12:29.76:0,30,328	1/1:9,0:9:19.01:88,19,0	1/1:8,0:8:3.84:10,4,0	1/1:24,0:24:8.89:62,9,0	1/1:10,0:10:15.50:53,16,0	0/1:33,0:31:15.15:128,0,15	1/1:22,0:21:4.81:55,5,0	1/1:19,0:17:12.59:104,13,0	1/1:18,0:17:19.59:131,20,0	1/1:11,0:11:1.19:23,1,0	0/0:21,0:19:41.71:0,42,417	1/1:13,0:13:18.06:54,18,0	1/1:21,0:20:11.77:74,12,0	0/0:17,0:17:45.02:0,45,607	1/1:19,0:16:27.13:80,27,0	1/1:13,0:12:17.31:55,17,0	1/1:8,0:7:10.91:47,11,0
chr10	13583868	.	T	TC	1315.29	PASS	AB=0.979;AC=29;AF=0.537;AN=54;BaseQRankSum=0.955;DP=468;FS=34.355;HRun=0;HaplotypeScore=112.8534;InbreedingCoeff=-0.0134;MQ=52.61;MQ0=15;MQRankSum=2.895;QD=3.71;ReadPosRankSum=-2.901;VQSLOD=1.0330;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:26:71.73:0,72,768	0/1:16,0:15:23.99:35,0,24	./.	0/0:16,0:6:4.95:0,5,34	0/1:20,1:18:8.03:51,0,8	1/1:10,0:10:2.95:74,3,0	1/1:19,0:18:11.19:104,11,0	0/1:20,1:21:15.19:99,0,15	0/1:8,1:9:19.37:23,0,19	0/1:21,0:18:1.26:181,0,1	1/1:13,0:13:5.94:102,6,0	0/0:12,0:12:27.54:0,28,326	0/1:9,0:9:10.87:34,0,11	0/0:7,0:7:4.71:0,5,20	0/1:25,0:25:9.12:26,0,9	1/1:11,0:11:5.18:51,5,0	0/1:33,0:31:38.14:69,0,38	0/1:22,2:23:21.29:57,0,21	1/1:17,0:15:23.68:159,24,0	1/1:17,0:16:13.79:133,14,0	0/1:11,0:11:13.53:21,0,14	0/0:21,0:19:43.28:0,43,414	0/1:14,0:14:8.01:35,0,8	0/1:21,0:20:14.69:46,0,15	0/0:15,0:15:42.07:0,42,498	0/1:19,0:16:17.84:35,0,18	1/1:14,0:12:6.70:57,7,0	1/1:10,0:8:11.96:94,12,0
chr10	13584475	.	GA	G	15486.15	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=14.359;DP=616;FS=1.096;HRun=2;HaplotypeScore=133.0919;InbreedingCoeff=0.9935;MQ=85.89;MQ0=0;MQRankSum=-10.953;QD=34.26;ReadPosRankSum=1.864;VQSLOD=4.4249;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,123,1801	1/1:0,12:12:30.10:388,30,0	0/0:30,0:30:81.48:0,81,1146	0/0:21,0:20:51.09:0,51,698	1/1:1,16:16:30.10:387,30,0	1/1:0,17:17:36.12:465,36,0	1/1:2,26:28:81.18:1026,81,0	1/1:1,29:30:84.21:1030,84,0	1/1:0,25:24:69.22:892,69,0	1/1:2,27:29:84.25:1064,84,0	1/1:0,21:21:51.11:636,51,0	0/0:26,0:26:78.24:0,78,1128	1/1:0,19:19:57.12:716,57,0	1/1:1,18:19:57.12:717,57,0	1/1:3,21:24:69.20:868,69,0	1/1:2,17:19:54.11:665,54,0	1/1:2,20:22:63.18:786,63,0	1/1:0,13:13:36.12:466,36,0	1/1:0,16:16:48.16:620,48,0	1/1:0,21:21:51.17:659,51,0	1/1:0,27:27:66.15:833,66,0	0/0:17,0:17:51.17:0,51,762	1/1:0,16:16:41.96:523,42,0	1/1:2,17:19:48.08:585,48,0	0/0:25,0:25:75.25:0,75,1103	1/1:2,27:29:87.20:1076,87,0	1/1:0,25:25:75.20:943,75,0	1/1:1,3:4:12.03:141,12,0
chr10	13584541	.	GCTGCCGGTATT	G	23409.35	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=15.540;DP=458;FS=10.112;HRun=0;HaplotypeScore=250.8567;InbreedingCoeff=0.9448;MQ=73.94;MQ0=0;MQRankSum=-15.230;QD=73.38;ReadPosRankSum=1.538;VQSLOD=3.4252;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,150,7957	1/1:3,4:8:23.95:594,24,0	0/0:14,0:14:39.13:0,39,1939	0/0:16,0:16:13.67:0,14,1548	1/1:4,11:15:30.09:917,30,0	1/1:2,15:16:48.05:1536,48,0	1/1:7,14:21:56.97:1515,57,0	1/1:7,9:16:45.01:1106,45,0	1/1:7,16:22:63:1739,63,0	1/1:7,15:22:60.05:1713,60,0	1/1:2,10:12:30.03:935,30,0	0/0:29,0:29:87.25:0,87,4426	1/1:2,13:15:45:1426,45,0	1/1:3,5:8:17.92:464,18,0	1/1:4,15:19:48.12:1624,48,0	1/1:3,9:12:33.07:1031,33,0	1/1:3,13:16:42.02:1270,42,0	1/1:0,7:6:12.04:428,12,0	1/1:6,7:13:38.90:873,39,0	1/1:3,12:13:21.03:662,21,0	1/1:6,4:10:12:341,12,0	0/0:10,0:10:24.08:0,24,1383	1/1:2,9:11:24.08:764,24,0	1/1:4,12:16:24.49:833,24,0	0/0:17,0:17:48.16:0,48,2592	1/1:6,16:22:60.10:1800,60,0	1/1:3,15:18:51.14:1732,51,0	1/1:2,1:3:3.01:107,3,0
chr10	13584597	.	AAG	A	13469.41	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=14.181;DP=536;FS=7.805;HRun=0;HaplotypeScore=161.3655;InbreedingCoeff=0.9950;MQ=83.50;MQ0=2;MQRankSum=-10.674;QD=34.45;ReadPosRankSum=0.609;VQSLOD=6.2379;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,129,2219	1/1:3,3:6:15.05:209,15,0	0/0:21,0:21:53.39:0,53,889	0/0:22,0:22:34.63:0,35,814	1/1:2,14:16:38.81:545,39,0	1/1:1,15:14:42.14:581,42,0	1/1:1,22:23:57.19:797,57,0	1/1:3,29:32:87.26:1160,87,0	1/1:5,15:19:51.17:713,51,0	1/1:5,15:20:57.18:768,57,0	1/1:0,10:9:24.05:314,24,0	0/0:24,0:24:66.21:0,66,1147	1/1:2,15:17:42.14:586,42,0	1/1:2,16:17:42.14:581,42,0	1/1:3,23:26:69.23:964,69,0	1/1:0,16:16:45.15:629,45,0	1/1:3,20:23:51.17:713,51,0	1/1:0,19:19:42.14:582,42,0	1/1:3,12:15:36.12:504,36,0	1/1:4,6:8:21.03:272,21,0	1/1:3,7:10:27.08:360,27,0	0/0:17,0:17:48.16:0,48,850	1/1:3,13:16:45.12:588,45,0	1/1:2,17:19:36.12:503,36,0	0/0:15,0:15:45.15:0,45,810	1/1:2,22:24:66.21:908,66,0	1/1:0,24:24:60.09:838,60,0	1/1:1,10:11:27.05:356,27,0
chr10	13584709	.	CA	C	11608.83	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=12.603;DP=458;FS=0.912;HRun=1;HaplotypeScore=99.9567;InbreedingCoeff=0.9950;MQ=70.00;MQ0=0;MQRankSum=-9.046;QD=33.36;ReadPosRankSum=3.587;VQSLOD=4.6359;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,99,1366	1/1:0,10:10:27:351,27,0	0/0:13,0:13:26.06:0,26,398	0/0:13,0:13:35.86:0,36,431	1/1:0,12:12:27.04:353,27,0	1/1:0,14:14:39.13:541,39,0	1/1:0,18:17:51.17:707,51,0	1/1:2,11:13:33.02:412,33,0	1/1:0,18:18:36.12:497,36,0	1/1:0,16:16:45.13:605,45,0	1/1:2,5:7:15.05:207,15,0	0/0:16,0:16:48.15:0,48,697	1/1:0,12:12:30.10:416,30,0	1/1:0,18:18:48.16:664,48,0	1/1:0,19:19:42.14:582,42,0	1/1:0,13:13:39.13:541,39,0	1/1:0,19:19:48.16:667,48,0	1/1:0,34:34:81.20:1105,81,0	1/1:0,15:15:33.10:432,33,0	1/1:0,15:15:36.12:500,36,0	1/1:0,38:38:69.23:952,69,0	0/0:11,0:11:33.11:0,33,464	1/1:0,14:14:32.94:457,33,0	1/1:0,11:11:30.10:411,30,0	0/0:22,0:22:66.17:0,66,895	1/1:0,10:10:30.10:417,30,0	1/1:0,12:12:33.11:458,33,0	1/1:0,10:10:24.08:334,24,0
chr10	13584812	.	AGGGTCTCTTGCT	A	24381.02	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=13.945;DP=501;FS=10.774;HRun=0;HaplotypeScore=244.8389;InbreedingCoeff=0.9738;MQ=63.96;MQ0=0;MQRankSum=-14.967;QD=72.56;ReadPosRankSum=3.117;VQSLOD=2.9885;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,105,5852	1/1:1,5:6:12.04:451,12,0	0/0:22,0:19:51.18:0,51,2393	0/0:37,0:36:92.72:0,93,4928	1/1:5,18:23:38.82:1465,39,0	1/1:3,8:11:24.08:902,24,0	1/1:4,18:21:45.15:1691,45,0	1/1:5,12:17:36.09:967,36,0	1/1:2,14:16:30.10:1127,30,0	1/1:3,6:9:18.06:677,18,0	1/1:4,18:22:51.18:1915,51,0	0/0:22,0:22:63.22:0,63,3836	1/1:2,10:12:30.10:1127,30,0	1/1:1,18:19:45.02:1690,45,0	1/1:6,21:27:60.21:2255,60,0	1/1:1,13:14:39.13:1466,39,0	1/1:3,12:15:21.07:763,21,0	1/1:0,11:11:30.03:1033,30,0	1/1:6,8:14:24.01:723,24,0	1/1:7,11:18:21.07:789,21,0	1/1:9,7:16:9.36:533,9,0	0/0:25,0:25:69.24:0,69,4137	1/1:4,8:12:18.06:676,18,0	1/1:3,11:14:21.07:789,21,0	0/0:23,0:23:63.22:0,63,3658	1/1:3,18:21:54.17:1876,54,0	1/1:3,8:11:21.07:789,21,0	1/1:0,6:6:18.06:677,18,0
chr10	13585249	.	GT	G	348.83	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=2.162;DP=583;FS=2.607;HRun=1;HaplotypeScore=199.1490;InbreedingCoeff=0.9838;MQ=74.53;MQ0=0;MQRankSum=-7.002;QD=12.92;ReadPosRankSum=-1.528;VQSLOD=2.3414;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:45.15:0,45,719	0/0:7,0:7:17.70:0,18,129	0/0:24,0:23:69.22:0,69,1051	0/0:24,0:22:47.99:0,48,901	0/0:12,0:12:29.85:0,30,238	1/1:2,14:16:43.36:292,43,0	1/1:1,10:11:13.77:174,14,0	0/0:30,0:30:82.46:0,82,593	0/0:28,0:27:71.15:0,71,496	0/0:21,0:21:62.02:0,62,419	0/0:17,0:17:44.12:0,44,300	0/0:23,0:23:66.23:0,66,1051	0/0:24,0:24:62.31:0,62,473	0/0:27,0:27:74.16:0,74,524	0/0:26,0:26:73.90:0,74,496	0/0:28,0:28:77.13:0,77,538	0/0:18,0:18:50.31:0,50,337	0/0:16,0:16:38.42:0,38,268	0/0:19,0:18:53.51:0,54,395	0/0:24,0:24:53.71:0,54,429	0/0:25,0:25:74.19:0,74,531	0/0:19,0:19:57.19:0,57,911	0/0:16,0:16:47.60:0,48,346	0/0:18,0:18:35.11:0,35,224	0/0:20,0:20:57.19:0,57,911	0/0:25,0:25:65.05:0,65,468	0/0:33,0:33:86.28:0,86,633	0/0:15,0:15:29.52:0,30,194
chr10	13585251	.	CTAA	C	671.32	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=0.365;DP=591;FS=2.727;HRun=0;HaplotypeScore=221.7725;InbreedingCoeff=0.9918;MQ=74.84;MQ0=0;MQRankSum=-6.336;QD=25.82;ReadPosRankSum=-0.485;VQSLOD=3.3913;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:54.14:0,54,1238	0/0:7,0:7:21.07:0,21,489	0/0:27,0:26:72.21:0,72,1666	0/0:26,0:24:68.81:0,69,1513	0/0:12,0:12:30.10:0,30,719	1/1:1,14:15:42.12:473,42,0	1/1:1,10:11:16.69:318,17,0	0/0:31,0:31:84.25:0,84,2046	0/0:29,0:28:75.26:0,75,1805	0/0:22,0:22:66.23:0,66,1614	0/0:18,0:18:45.12:0,45,1033	0/0:22,0:22:63.20:0,63,1476	0/0:24,0:24:66.16:0,66,1491	0/0:27,0:27:75.26:0,75,1840	0/0:26,0:26:75.26:0,75,1793	0/0:27,0:27:81.28:0,81,1925	0/0:18,0:18:51.18:0,51,1233	0/0:16,0:16:39.13:0,39,960	0/0:20,0:19:57.20:0,57,1363	0/0:24,0:24:54.19:0,54,1325	0/0:25,0:25:75.26:0,75,1783	0/0:19,0:19:57.18:0,57,1323	0/0:16,0:16:48.16:0,48,1180	0/0:17,0:17:38.76:0,39,903	0/0:20,0:20:60.19:0,60,1427	0/0:26,0:26:72.11:0,72,1720	0/0:33,0:33:87.30:0,87,2108	0/0:15,0:15:36.12:0,36,850
chr10	13585318	.	GT	G	9901.68	PASS	AB=0.755;AC=44;AF=0.786;AN=56;BaseQRankSum=10.833;DP=660;FS=9.590;HRun=11;HaplotypeScore=124.1645;InbreedingCoeff=0.8242;MQ=64.17;MQ0=0;MQRankSum=-4.189;QD=18.24;ReadPosRankSum=0.949;VQSLOD=4.2046;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,1:31:62.53:0,63,840	1/1:3,12:15:35.93:293,36,0	0/1:13,1:13:1.66:2,0,244	0/0:10,1:10:23.23:0,23,214	1/1:7,25:32:71.90:591,72,0	1/1:3,22:25:56.89:468,57,0	1/1:1,18:19:47.93:394,48,0	1/1:9,26:36:16.13:534,16,0	1/1:4,19:22:47.92:394,48,0	1/1:4,22:26:71.90:591,72,0	1/1:2,14:16:9.97:288,10,0	0/0:15,0:17:44.98:0,45,462	1/1:1,26:27:68.91:566,69,0	1/1:6,14:20:41.90:344,42,0	1/1:1,28:29:77.88:640,78,0	1/1:4,27:31:42.51:558,43,0	1/1:2,24:26:68.92:567,69,0	1/1:4,15:19:44.91:369,45,0	1/1:5,19:24:36.44:459,36,0	1/1:6,24:30:59.85:493,60,0	1/1:2,13:16:38.95:320,39,0	0/0:27,1:31:50.41:0,50,679	1/1:2,10:13:29:228,29,0	1/1:2,16:18:47.94:394,48,0	0/0:27,0:27:63.14:0,63,659	1/1:3,23:27:70.94:572,71,0	0/1:9,25:34:20.72:467,0,21	1/1:8,15:23:44.91:370,45,0
chr10	13585478	.	T	TGTAA	31331.77	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-7.978;DP=698;FS=1.904;HRun=0;HaplotypeScore=101.3469;InbreedingCoeff=0.9960;MQ=75.49;MQ0=2;MQRankSum=-7.747;QD=60.60;ReadPosRankSum=2.773;VQSLOD=6.8507;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:56:99:0,156,2720	1/1:2,7:9:15.05:395,15,0	0/0:24,0:24:63.17:0,63,1050	0/0:24,0:24:51.21:0,51,1068	1/1:7,20:28:63.06:1482,63,0	1/1:3,16:20:51.13:1286,51,0	1/1:2,13:17:42.06:988,42,0	1/1:6,20:27:72.25:1752,72,0	1/1:2,18:19:48.16:1266,48,0	1/1:4,22:26:69.22:1649,69,0	1/1:4,25:30:74.89:1791,75,0	0/0:26,0:26:75.26:0,75,1368	1/1:3,17:21:48.16:1266,48,0	1/1:2,21:25:60.21:1581,60,0	1/1:2,23:26:66.18:1682,66,0	1/1:1,24:27:69.24:1821,69,0	1/1:4,28:34:75.26:1957,75,0	1/1:5,20:27:60.21:1568,60,0	1/1:6,15:21:51.12:1158,51,0	1/1:1,21:21:54.03:1245,54,0	1/1:5,19:24:54.19:1378,54,0	0/0:31,0:31:84.29:0,84,1544	1/1:2,19:22:51.09:1218,51,0	1/1:3,22:25:60.21:1583,60,0	0/0:20,0:19:54.18:0,54,968	1/1:1,21:22:60.21:1583,60,0	1/1:2,30:33:84.23:2128,84,0	1/1:1,8:9:21.07:555,21,0
chr10	13586141	.	G	GT	1374.53	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-6.459;DP=740;FS=1.394;HRun=0;HaplotypeScore=201.3305;InbreedingCoeff=0.9843;MQ=76.53;MQ0=0;MQRankSum=-0.015;QD=34.36;ReadPosRankSum=1.623;VQSLOD=2.9465;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,143,1751	0/0:16,0:16:48.11:0,48,628	0/0:19,0:19:54.13:0,54,665	0/0:17,0:17:41.31:0,41,460	0/0:19,0:19:51.14:0,51,675	1/1:0,22:22:60.20:855,60,0	1/1:1,17:18:45.14:641,45,0	0/0:26,0:26:72.10:0,72,859	0/0:25,0:25:75.08:0,75,994	0/0:31,0:31:93.22:0,93,1182	0/0:18,0:18:51.12:0,51,659	0/0:26,0:26:73.37:0,73,872	0/0:31,0:31:93.31:0,93,1282	0/0:31,0:31:90.23:0,90,1196	0/0:28,0:28:81.24:0,81,1082	0/0:23,0:23:63.21:0,63,877	0/0:53,0:53:99:0,156,2081	0/0:36,0:36:99:0,105,1313	0/0:24,0:24:57.12:0,57,708	0/0:25,0:25:69.07:0,69,879	0/0:46,0:46:99:0,135,1826	0/0:14,0:14:42.12:0,42,553	0/0:19,0:19:54.10:0,54,678	0/0:39,0:39:99:0,114,1505	0/0:19,0:19:57.16:0,57,749	0/0:34,0:34:96.14:0,96,1216	0/0:25,0:24:75.23:0,75,1025	0/0:4,0:4:12.04:0,12,167
chr10	13586479	.	CTTA	C	21710.06	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=3.781;DP=728;FS=2.674;HRun=0;HaplotypeScore=128.1946;InbreedingCoeff=0.9995;MQ=73.07;MQ0=0;MQRankSum=-5.263;QD=41.43;ReadPosRankSum=4.176;VQSLOD=6.4205;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:96.33:0,96,2143	1/1:0,10:10:30.10:477,30,0	0/0:12,0:12:33.10:0,33,665	0/0:16,0:16:42.08:0,42,778	1/1:0,26:26:75.26:1213,75,0	0/0:16,0:16:48.15:0,48,1030	0/0:35,0:35:96.32:0,96,2082	1/1:2,28:31:84.26:1309,84,0	1/1:2,28:30:72.25:1176,72,0	1/1:2,28:30:78.27:1274,78,0	1/1:1,22:23:60.20:967,60,0	0/0:35,0:35:93.30:0,93,2017	1/1:1,20:21:57.19:918,57,0	1/1:3,34:37:90.31:1446,90,0	1/1:1,36:37:93.32:1505,93,0	1/1:0,24:24:69.23:1115,69,0	1/1:1,25:26:69.24:1127,69,0	1/1:1,24:25:63.22:1029,63,0	1/1:3,15:18:45.14:711,45,0	1/1:2,26:28:75.21:1195,75,0	1/1:1,48:49:99:1898,117,0	0/0:28,0:28:78.27:0,78,1726	1/1:0,19:19:48.16:755,48,0	1/1:4,20:24:47.45:783,47,0	0/0:24,0:24:66.23:0,66,1455	1/1:2,30:32:87.29:1392,87,0	1/1:2,24:26:63.22:1028,63,0	1/1:0,8:8:24.08:392,24,0
chr10	13586856	.	AG	A	14691.78	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=17.761;DP=609;FS=2.336;HRun=3;HaplotypeScore=165.6511;InbreedingCoeff=0.9901;MQ=78.56;MQ0=0;MQRankSum=-7.192;QD=35.06;ReadPosRankSum=2.739;VQSLOD=4.0066;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:81.27:0,81,1166	1/1:1,3:4:9.03:112,9,0	0/0:20,0:20:60.15:0,60,804	0/0:25,0:24:48.36:0,48,754	1/1:0,16:16:48.15:594,48,0	0/0:21,0:21:63.19:0,63,888	0/0:22,0:22:63.16:0,63,864	1/1:0,25:25:72.20:868,72,0	1/1:1,14:15:42.13:521,42,0	1/1:0,30:30:90.28:1116,90,0	1/1:2,19:21:48.15:594,48,0	0/0:30,0:30:84.28:0,84,1202	1/1:1,24:25:72.23:892,72,0	1/1:2,22:24:66.21:818,66,0	1/1:1,27:28:81.25:1003,81,0	1/1:0,21:21:60.19:744,60,0	1/1:0,17:17:51.16:631,51,0	1/1:0,22:22:66.21:818,66,0	1/1:1,25:26:75.24:930,75,0	1/1:1,20:21:57.18:706,57,0	1/1:1,18:19:54.17:669,54,0	0/0:28,0:28:78.26:0,78,1121	1/1:0,17:17:51.16:631,51,0	1/1:1,23:24:65.99:793,66,0	0/0:17,0:17:48.16:0,48,689	1/1:3,26:29:81.23:989,81,0	1/1:0,26:26:75.24:929,75,0	1/1:0,9:9:27.08:335,27,0
chr10	13586887	.	T	TAAAAGG	26199.34	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=5.310;DP=639;FS=0.784;HRun=0;HaplotypeScore=193.3697;InbreedingCoeff=0.9476;MQ=70.86;MQ0=0;MQRankSum=-13.991;QD=57.58;ReadPosRankSum=-2.011;VQSLOD=4.6646;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:63.11:0,63,1217	1/1:4,4:8:21.06:621,21,0	0/0:24,0:24:28.35:0,28,605	0/0:22,0:21:4.84:0,5,610	1/1:12,13:25:60.09:1672,60,0	0/0:18,0:18:42.13:0,42,844	0/0:20,0:20:51.07:0,51,925	1/1:29,4:33:63.55:1424,64,0	1/1:8,12:20:45.15:1483,45,0	1/1:21,22:43:93.16:2566,93,0	1/1:8,13:22:51.12:1525,51,0	0/0:27,0:27:66.08:0,66,1265	1/1:11,12:23:51.02:1334,51,0	1/1:10,8:18:42.07:1156,42,0	1/1:17,15:33:75.51:2090,76,0	1/1:13,8:21:42.06:1149,42,0	1/1:9,6:15:33:814,33,0	1/1:14,5:19:27.08:745,27,0	1/1:20,6:26:54.10:1283,54,0	1/1:17,8:25:39.07:1140,39,0	1/1:11,2:12:6:124,6,0	0/0:30,0:30:75.23:0,75,1511	1/1:14,16:30:75.09:2076,75,0	1/1:9,4:13:14.97:336,15,0	0/0:18,0:18:42.14:0,42,898	1/1:13,19:32:90.10:2474,90,0	1/1:18,12:30:78.04:1888,78,0	1/1:3,3:6:9.03:300,9,0
chr10	13587080	.	T	TAC	23865.08	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-12.688;DP=670;FS=11.319;HRun=0;HaplotypeScore=68.0876;InbreedingCoeff=0.9967;MQ=89.80;MQ0=1;MQRankSum=-4.392;QD=45.28;ReadPosRankSum=4.463;VQSLOD=6.0430;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:78.19:0,78,1033	1/1:1,5:6:15.05:270,15,0	0/0:21,0:21:51.17:0,51,709	0/0:30,0:30:78.21:0,78,1052	1/1:2,26:28:66.23:1188,66,0	1/1:0,20:20:57.20:1026,57,0	1/1:5,17:23:51.17:908,51,0	1/1:4,36:40:99:1902,108,0	1/1:0,25:26:69.24:1238,69,0	1/1:4,22:27:69.20:1192,69,0	1/1:2,21:24:60.20:1059,60,0	0/0:20,0:20:57.19:0,57,798	1/1:3,13:15:36.12:630,36,0	1/1:0,23:24:60.20:1060,60,0	1/1:3,30:33:72.25:1295,72,0	1/1:2,14:16:42.12:756,42,0	1/1:1,22:24:57.20:1023,57,0	1/1:1,22:23:69.24:1232,69,0	1/1:1,17:18:51.16:879,51,0	1/1:5,24:29:66.23:1188,66,0	1/1:1,35:36:96.33:1728,96,0	0/0:25,0:25:69.23:0,69,955	1/1:0,23:23:60.21:1080,60,0	1/1:1,23:24:57.20:1026,57,0	0/0:21,0:21:60.18:0,60,820	1/1:1,27:28:81.28:1457,81,0	1/1:3,25:28:66.23:1186,66,0	1/1:0,11:11:30.10:540,30,0
chr10	13588334	.	T	TTGTGG	16584.91	PASS	AB=1.000;AC=38;AF=0.679;AN=56;BaseQRankSum=15.432;DP=516;FS=1.499;HRun=0;HaplotypeScore=149.0638;InbreedingCoeff=0.4082;MQ=88.25;MQ0=0;MQRankSum=-15.466;QD=44.34;ReadPosRankSum=6.385;VQSLOD=5.0481;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,126,2802	1/1:2,0:2:6.02:104,6,0	0/0:35,0:35:99:0,99,1918	0/0:15,0:15:45:0,45,869	0/1:25,0:25:37.75:982,0,38	1/1:4,13:17:48.06:1332,48,0	1/1:4,11:15:45.15:1323,45,0	0/1:28,0:28:62.33:819,0,62	1/1:16,0:16:0.14:687,0,0	1/1:18,0:18:53.39:890,53,0	1/1:13,0:14:16.05:652,16,0	0/0:16,0:16:48.16:0,48,1116	1/1:22,0:22:3.20:989,3,0	1/1:14,0:14:23.09:628,23,0	1/1:23,0:23:33.22:1158,33,0	1/1:17,0:18:31.15:838,31,0	1/1:13,0:13:11.08:467,11,0	0/1:10,0:10:74.89:223,0,75	0/1:18,0:18:13.87:681,0,14	1/1:18,0:18:39.93:793,40,0	0/1:20,0:20:15.85:546,0,16	0/0:21,0:21:63.18:0,63,1411	1/1:19,0:19:7.65:800,8,0	0/1:9,0:9:46.90:211,0,47	0/0:13,0:12:36.11:0,36,791	1/1:19,0:19:4.19:823,4,0	1/1:29,0:29:13.57:1259,14,0	1/1:7,0:7:21.07:379,21,0
chr10	13588335	.	C	CGTGGA	28821.74	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=2.687;DP=538;FS=1.689;HRun=0;HaplotypeScore=121.0993;InbreedingCoeff=0.9687;MQ=86.50;MQ0=0;MQRankSum=-13.621;QD=73.15;ReadPosRankSum=0.426;VQSLOD=6.2128;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,120,2467	1/1:1,1:2:6.02:180,6,0	0/0:34,0:34:80.44:0,80,1620	0/0:16,0:16:39.13:0,39,783	1/1:5,19:24:54.18:1649,54,0	1/1:21,0:21:48.15:1342,48,0	1/1:16,0:16:45.15:1313,45,0	1/1:8,21:29:66.20:1774,66,0	1/1:4,12:16:45.14:1226,45,0	1/1:4,14:18:54.18:1603,54,0	1/1:3,11:14:39.13:1157,39,0	0/0:16,0:16:48.16:0,48,1008	1/1:6,17:23:63.20:1787,63,0	1/1:3,12:15:42.14:1200,42,0	1/1:6,19:25:69.24:2033,69,0	1/1:4,14:18:51.16:1506,51,0	1/1:3,10:13:27.09:785,27,0	1/1:5,5:10:15.05:465,15,0	1/1:9,12:21:60.21:1804,60,0	1/1:7,14:21:51.17:1443,51,0	1/1:5,15:20:33.11:1019,33,0	0/0:22,0:22:60.21:0,60,1237	1/1:5,14:19:48.16:1432,48,0	1/1:5,5:10:12.04:365,12,0	0/0:14,0:13:33.11:0,33,682	1/1:7,14:21:57.20:1686,57,0	1/1:11,20:31:84.29:2406,84,0	1/1:0,7:7:21.07:649,21,0
chr10	13588371	.	CG	C	11606.60	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=10.005;DP=472;FS=3.793;HRun=1;HaplotypeScore=109.7828;InbreedingCoeff=0.9835;MQ=88.80;MQ0=0;MQRankSum=-9.498;QD=33.55;ReadPosRankSum=0.900;VQSLOD=4.5593;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:96.27:0,96,1338	1/1:0,5:5:8.90:125,9,0	0/0:27,0:27:67.27:0,67,899	0/0:17,0:17:47.87:0,48,573	1/1:3,14:17:36.12:497,36,0	1/1:2,17:19:45.10:599,45,0	1/1:1,13:14:36.07:475,36,0	1/1:6,11:17:45.08:561,45,0	1/1:1,19:20:56.98:758,57,0	1/1:2,19:21:57.03:725,57,0	1/1:2,12:14:27.09:375,27,0	0/0:14,0:14:42.13:0,42,578	1/1:4,13:17:45.10:602,45,0	1/1:1,11:12:36.08:470,36,0	1/1:2,22:24:69.05:868,69,0	1/1:1,15:16:48.07:620,48,0	1/1:0,16:16:42.09:560,42,0	1/1:0,12:12:36.12:501,36,0	1/1:8,12:20:43.45:610,43,0	1/1:2,15:17:36.12:490,36,0	1/1:4,10:14:29.95:335,30,0	0/0:23,0:23:63.15:0,63,852	1/1:4,14:18:48.03:588,48,0	1/1:0,9:9:15.01:186,15,0	0/0:12,0:12:33.07:0,33,433	1/1:6,11:17:48.03:587,48,0	1/1:1,19:20:60.15:798,60,0	1/1:1,6:7:21.06:274,21,0
chr10	13589330	.	AAAACC	A	8376.43	PASS	AB=0.958;AC=46;AF=0.821;AN=56;BaseQRankSum=7.771;DP=624;FS=0.000;HRun=0;HaplotypeScore=252.6996;InbreedingCoeff=0.2025;MQ=60.33;MQ0=5;MQRankSum=-4.478;QD=14.52;ReadPosRankSum=3.054;VQSLOD=3.9539;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:15.69:0,16,610	1/1:4,2:6:9.25:93,9,0	0/1:29,0:16:51.78:52,0,92	0/1:31,0:21:24.84:25,0,90	1/1:12,10:22:32.99:350,33,0	0/1:19,0:19:53.47:59,0,53	1/1:14,0:13:13.52:92,14,0	1/1:17,6:23:28.73:254,29,0	1/1:8,18:26:55.22:677,55,0	1/1:13,14:27:50.81:574,51,0	1/1:9,16:24:39.28:453,39,0	0/1:24,0:24:4.93:5,0,232	1/1:11,10:21:38.95:442,39,0	1/1:13,14:27:48.86:625,49,0	1/1:14,16:30:59.05:654,59,0	1/1:16,10:26:37.45:389,37,0	1/1:16,8:24:36.92:321,37,0	1/1:8,9:17:23.56:251,24,0	0/1:8,4:12:19.08:136,0,19	1/1:13,14:27:46.90:592,47,0	1/1:15,8:22:32.35:298,32,0	0/1:25,0:24:22.99:23,0,195	1/1:11,13:24:7.94:392,8,0	1/1:6,5:11:18.74:165,19,0	0/0:15,0:15:0.87:0,1,145	1/1:14,13:27:56.39:631,56,0	1/1:14,18:32:56.59:712,57,0	1/1:1,3:4:8.09:113,8,0
chr10	13589338	.	AACC	A	6054.41	PASS	AB=1.000;AC=49;AF=0.875;AN=56;BaseQRankSum=4.403;DP=587;FS=14.535;HRun=0;HaplotypeScore=234.2912;InbreedingCoeff=-0.1456;MQ=57.38;MQ0=8;MQRankSum=-5.942;QD=10.31;ReadPosRankSum=1.844;VQSLOD=3.2742;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:34,0:34:54.60:55,0,249	1/1:5,0:5:9.10:58,9,0	0/1:35,0:16:51.44:51,0,86	0/1:31,0:17:32.25:32,0,72	1/1:20,0:20:34.78:226,35,0	1/1:9,9:18:36.11:286,36,0	1/1:9,4:12:25.25:199,25,0	1/1:27,0:27:26.53:160,27,0	1/1:23,0:23:56.61:435,57,0	1/1:24,0:24:47.84:350,48,0	1/1:22,0:21:44.95:340,45,0	0/1:23,0:23:55.88:125,0,56	1/1:18,0:18:34.86:265,35,0	1/1:25,0:25:54.20:422,54,0	1/1:26,0:26:57.28:402,57,0	1/1:22,0:22:41.70:271,42,0	1/1:21,0:21:29.28:178,29,0	1/1:17,0:17:27.24:180,27,0	0/1:10,0:10:10.62:78,0,11	1/1:24,0:24:52.39:406,52,0	1/1:19,0:18:28.75:189,29,0	0/1:23,0:22:24.30:24,0,46	1/1:22,0:22:38.36:278,38,0	1/1:11,0:11:17.64:110,18,0	0/1:19,0:19:30.12:52,0,30	1/1:20,0:20:44.67:341,45,0	1/1:30,0:30:62.86:468,63,0	1/1:4,0:4:8.91:71,9,0
chr10	13589339	.	ACC	A	4873.66	PASS	AB=0.960;AC=52;AF=0.929;AN=56;BaseQRankSum=3.481;DP=585;FS=25.867;HRun=2;HaplotypeScore=228.3247;InbreedingCoeff=-0.0924;MQ=56.42;MQ0=8;MQRankSum=-6.168;QD=8.33;ReadPosRankSum=0.976;VQSLOD=-0.5849;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:34,0:34:94.76:134,0,95	1/1:5,0:5:9.02:45,9,0	0/1:30,4:15:68.36:68,0,86	0/1:30,1:17:24.39:24,0,82	1/1:20,0:20:34.05:178,34,0	1/1:17,1:18:37.16:184,37,0	1/1:12,0:11:21.09:113,21,0	1/1:29,0:29:26.07:120,26,0	1/1:25,0:25:60.36:333,60,0	1/1:25,0:24:46.91:257,47,0	1/1:21,0:20:44.15:267,44,0	1/1:21,1:22:5:194,5,0	1/1:17,0:17:34.16:198,34,0	1/1:24,0:24:53.53:329,54,0	1/1:26,0:26:56.21:296,56,0	1/1:22,0:22:41.08:210,41,0	1/1:21,0:21:28.74:138,29,0	1/1:17,0:17:26.88:141,27,0	0/1:9,0:9:9.76:51,0,10	1/1:24,0:24:51.71:313,52,0	1/1:18,0:17:28.12:142,28,0	1/1:22,1:22:9.38:88,9,0	1/1:22,0:22:39.41:208,39,0	1/1:11,0:11:17.53:90,18,0	1/1:18,1:19:3.64:94,4,0	1/1:20,0:20:43.86:254,44,0	1/1:30,0:30:60.98:355,61,0	1/1:4,0:4:8.72:51,9,0
chr10	13589340	.	CCAAA	C	4670.84	PASS	AB=0.694;AC=24;AF=0.429;AN=56;BaseQRankSum=15.880;DP=588;FS=5.454;HRun=0;HaplotypeScore=245.4367;InbreedingCoeff=-0.5792;MQ=56.05;MQ0=8;MQRankSum=-8.407;QD=10.24;ReadPosRankSum=11.584;VQSLOD=2.1239;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:36:90.80:0,91,948	0/1:3,2:5:21.50:44,0,22	0/1:37,0:15:2.13:2,0,69	0/0:31,0:16:17.26:0,17,148	0/1:10,10:20:71.74:168,0,72	0/1:18,0:18:51.54:71,0,52	0/1:12,0:11:26.08:65,0,26	0/1:15,6:29:99:145,0,139	1/1:7,18:25:3.27:445,3,0	0/1:11,14:24:32.97:325,0,33	0/1:4,16:19:17.87:261,0,18	0/0:20,0:21:12.60:0,13,363	0/1:6,10:16:40.78:205,0,41	0/1:9,14:23:44.95:323,0,45	0/1:10,16:26:47.60:347,0,48	0/1:13,10:23:52.14:266,0,52	0/1:14,8:22:63.06:176,0,63	0/1:8,9:17:93.93:152,0,94	0/1:5,4:9:49.59:79,0,50	0/1:8,14:24:16.70:364,0,17	0/1:11,8:18:23.98:140,0,24	0/0:24,0:23:63.28:0,63,497	0/1:8,14:22:46.50:253,0,46	0/1:6,5:11:38.63:83,0,39	0/0:20,0:20:41.05:0,41,339	0/1:6,13:19:24.21:294,0,24	0/1:11,18:29:54.10:392,0,54	0/1:1,3:4:2.68:70,0,3
chr10	13589449	.	C	CTT	320.68	PASS	AB=0.807;AC=2;AF=0.036;AN=56;BaseQRankSum=6.788;DP=767;FS=49.777;HRun=0;HaplotypeScore=155.2040;InbreedingCoeff=-0.0371;MQ=73.18;MQ0=0;MQRankSum=6.783;QD=4.52;ReadPosRankSum=-2.562;VQSLOD=1.2386;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:35:99:0,105,1686	0/0:14,0:14:39.12:0,39,608	0/1:15,8:23:99:248,0,590	0/1:41,7:47:99:161,0,1450	0/0:20,0:20:60.19:0,60,954	0/0:22,0:22:63.22:0,63,1028	0/0:26,0:26:72.25:0,72,1164	0/0:25,0:25:66.23:0,66,1071	0/0:28,0:28:78.27:0,78,1272	0/0:35,0:35:99:0,102,1657	0/0:22,0:22:66.21:0,66,1045	0/0:24,0:24:72.25:0,72,1175	0/0:29,0:29:78.27:0,78,1271	0/0:27,0:27:75.26:0,75,1220	0/0:37,0:36:99:0,105,1710	0/0:32,0:32:87.28:0,87,1392	0/0:49,0:49:99:0,138,2216	0/0:24,0:24:69.24:0,69,1119	0/0:24,0:24:69.17:0,69,1040	0/0:23,0:23:69.22:0,69,1095	0/0:51,0:51:99:0,144,2341	0/0:17,0:17:51.17:0,51,827	0/0:14,0:14:42.14:0,42,685	0/0:37,0:37:96.28:0,96,1525	0/0:19,0:19:57.19:0,57,929	0/0:30,0:30:90.28:0,90,1438	0/0:20,0:20:57.12:0,57,926	0/0:11,0:11:33.11:0,33,538
chr10	13590510	.	GATAATGGACTA	G	25985.81	PASS	AB=0.682;AC=37;AF=0.685;AN=54;BaseQRankSum=16.422;DP=561;FS=3.485;HRun=0;HaplotypeScore=272.9785;InbreedingCoeff=0.8991;MQ=41.05;MQ0=9;MQRankSum=-14.386;QD=77.11;ReadPosRankSum=3.675;VQSLOD=4.4433;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,154,8242	1/1:0,3:3:9.03:325,9,0	0/0:25,0:17:48.16:0,48,2176	0/0:28,0:23:63.20:0,63,2794	1/1:3,22:25:42.14:1522,42,0	0/0:21,0:21:63.22:0,63,3117	0/0:23,0:23:66.23:0,66,3401	1/1:5,14:19:45.15:1631,45,0	1/1:1,16:17:48.16:1739,48,0	1/1:3,17:19:51.18:1849,51,0	1/1:1,14:15:21.07:761,21,0	0/0:34,0:34:99:0,102,5762	1/1:2,11:13:33.11:1191,33,0	1/1:3,17:20:54.17:1872,54,0	1/1:9,16:25:57.15:1859,57,0	1/1:4,18:22:57.20:2005,57,0	1/1:5,8:13:30.04:787,30,0	0/1:8,7:15:88.49:807,0,88	1/1:9,8:15:33.11:1025,33,0	1/1:4,13:17:45.14:1425,45,0	1/1:5,6:11:12.04:435,12,0	0/0:21,0:21:63.22:0,63,3492	1/1:1,20:21:42.10:1521,42,0	1/1:2,9:11:27.05:889,27,0	0/0:20,0:20:60.19:0,60,3326	1/1:7,17:24:51.13:1735,51,0	1/1:4,24:28:72.25:2609,72,0	./.
chr10	13590568	.	A	AGAAGGCC	35426.24	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=16.894;DP=458;FS=9.473;HRun=0;HaplotypeScore=209.7277;InbreedingCoeff=0.9659;MQ=53.51;MQ0=0;MQRankSum=-17.111;QD=120.09;ReadPosRankSum=4.953;VQSLOD=4.7914;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,129,3508	1/1:0,2:2:6.02:251,6,0	0/0:21,0:21:60.21:0,60,1579	0/0:19,0:19:46.69:0,47,1123	1/1:0,20:20:54.19:2181,54,0	1/1:0,15:15:45.15:1877,45,0	1/1:0,13:13:39.13:1638,39,0	1/1:0,15:15:45.15:1883,45,0	1/1:0,8:8:24.08:1002,24,0	1/1:0,15:15:45.15:1882,45,0	1/1:0,20:20:60.21:2431,60,0	0/0:28,0:28:84.29:0,84,2340	1/1:0,10:10:30.10:1253,30,0	1/1:0,11:11:33.11:1377,33,0	1/1:0,19:19:57.20:2379,57,0	1/1:0,16:16:48.16:2003,48,0	1/1:0,13:13:36.12:1481,36,0	1/1:0,12:12:36.12:1499,36,0	1/1:0,6:6:15.05:627,15,0	1/1:0,24:24:72.25:3004,72,0	1/1:0,5:5:15.05:558,15,0	0/0:27,0:27:81.28:0,81,2264	1/1:0,18:20:57.20:2361,57,0	1/1:0,11:11:27.09:994,27,0	0/0:25,0:24:72.25:0,72,1982	1/1:0,15:15:39.13:1629,39,0	1/1:0,20:21:63.22:2615,63,0	1/1:0,4:4:12.04:502,12,0
chr10	13590571	.	G	GGT	19770.42	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=17.940;DP=568;FS=7.430;HRun=0;HaplotypeScore=300.5907;InbreedingCoeff=0.9691;MQ=50.49;MQ0=0;MQRankSum=-17.370;QD=48.70;ReadPosRankSum=2.547;VQSLOD=3.4869;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,120,1720	1/1:0,2:2:6.02:111,6,0	0/0:22,0:22:59.91:0,60,786	0/0:18,0:18:50.20:0,50,638	1/1:10,20:30:66.23:1203,66,0	1/1:5,15:20:54.18:980,54,0	1/1:6,13:19:51.16:906,51,0	1/1:15,15:30:87.14:1455,87,0	1/1:5,8:13:39.12:685,39,0	1/1:8,15:23:69.24:1282,69,0	1/1:6,20:26:72.25:1330,72,0	0/0:28,0:28:84.25:0,84,1197	1/1:0,10:10:30.10:549,30,0	1/1:2,11:13:36.12:667,36,0	1/1:2,19:21:63.22:1163,63,0	1/1:7,16:23:66.21:1156,66,0	1/1:1,13:14:39.13:719,39,0	1/1:1,12:13:39.13:719,39,0	1/1:9,6:14:33.09:553,33,0	1/1:4,24:28:84.29:1549,84,0	1/1:4,5:9:14.41:231,14,0	0/0:27,0:27:78.26:0,78,1148	1/1:6,19:25:57.20:1051,57,0	1/1:3,11:14:30.10:546,30,0	0/0:25,0:24:75.19:0,75,1060	1/1:11,15:26:72.24:1297,72,0	1/1:6,21:26:75.26:1393,75,0	1/1:1,4:5:12.04:223,12,0
chr10	13590603	.	TTC	T	15666.19	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=14.269;DP=631;FS=0.000;HRun=0;HaplotypeScore=224.1362;InbreedingCoeff=0.9896;MQ=62.84;MQ0=0;MQRankSum=-14.393;QD=33.19;ReadPosRankSum=0.968;VQSLOD=4.9830;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,102,1795	1/1:1,4:5:12.04:165,12,0	0/0:21,0:20:42.14:0,42,738	0/0:28,0:28:75.16:0,75,1221	1/1:4,29:33:72.19:965,72,0	1/1:2,18:20:51.17:692,51,0	1/1:2,22:24:63.17:842,63,0	1/1:7,30:37:90.28:1205,90,0	1/1:1,14:15:45.15:617,45,0	1/1:4,22:26:69.23:934,69,0	1/1:3,24:27:66.22:902,66,0	0/0:25,0:25:72.23:0,72,1249	1/1:1,5:6:15.05:204,15,0	1/1:1,16:17:45.15:616,45,0	1/1:3,22:25:66.22:902,66,0	1/1:4,23:27:66.21:891,66,0	1/1:1,17:18:42.14:571,42,0	1/1:5,16:21:45.15:615,45,0	1/1:7,12:17:33.11:448,33,0	1/1:1,24:25:72.19:959,72,0	1/1:1,13:14:33.07:430,33,0	0/0:23,0:23:60.18:0,60,1002	1/1:4,20:24:57.18:767,57,0	1/1:2,17:19:33.11:431,33,0	0/0:24,0:23:63.22:0,63,1117	1/1:6,26:32:81.27:1113,81,0	1/1:6,25:31:81.27:1110,81,0	1/1:0,7:7:21.07:288,21,0
chr10	13591010	.	CCCTG	C	1660.41	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=1.758;DP=735;FS=1.449;HRun=0;HaplotypeScore=229.1993;InbreedingCoeff=0.9953;MQ=53.55;MQ0=8;MQRankSum=-8.502;QD=33.21;ReadPosRankSum=0.024;VQSLOD=3.6393;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,102,2704	0/0:13,0:13:39.13:0,39,1020	0/0:20,0:13:38.96:0,39,923	0/0:21,0:13:33.11:0,33,838	0/0:37,0:37:89.91:0,90,2239	1/1:2,24:26:66.23:1227,66,0	1/1:1,23:16:30.10:555,30,0	0/0:33,0:27:60.21:0,60,1543	0/0:21,0:21:60.15:0,60,1498	0/0:26,0:26:75.73:0,76,1948	0/0:17,0:17:36.12:0,36,940	0/0:39,0:39:99:0,108,2786	0/0:25,0:25:75.24:0,75,1888	0/0:29,0:29:81.26:0,81,2056	0/0:25,0:25:72.23:0,72,1847	0/0:24,0:23:60.21:0,60,1582	0/0:29,0:29:69.24:0,69,1826	0/0:30,0:29:75.26:0,75,1946	0/0:22,0:16:36.12:0,36,938	0/0:27,0:27:72.23:0,72,1816	0/0:44,0:44:92.82:0,93,2312	0/0:35,0:34:96.33:0,96,2542	0/0:23,0:22:63.22:0,63,1647	0/0:20,0:19:51.18:0,51,1340	0/0:25,0:25:69.24:0,69,1835	0/0:26,0:26:68.35:0,68,1737	0/0:28,0:28:75.19:0,75,1762	0/0:8,0:8:18.06:0,18,476
chr10	13591738	.	C	CTTCT	21671.92	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=7.789;DP=537;FS=1.218;HRun=0;HaplotypeScore=139.0244;InbreedingCoeff=0.9885;MQ=53.54;MQ0=0;MQRankSum=-14.382;QD=60.71;ReadPosRankSum=-2.416;VQSLOD=5.8023;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,99,2017	1/1:0,6:9:21.07:572,21,0	0/0:29,0:26:66.43:0,66,1131	0/0:25,0:22:47.32:0,47,969	1/1:4,16:21:39.60:964,40,0	0/0:25,0:25:66.23:0,66,1381	0/0:26,0:26:78.25:0,78,1558	1/1:7,27:36:96.76:2479,97,0	1/1:1,19:21:54.19:1557,54,0	1/1:2,16:19:57.18:1449,57,0	1/1:3,14:19:30.10:755,30,0	0/0:13,0:13:36.12:0,36,752	1/1:0,18:20:42.14:1211,42,0	1/1:0,18:19:45.15:1297,45,0	1/1:2,14:17:48.16:1363,48,0	1/1:1,19:22:51.18:1449,51,0	1/1:5,18:24:51.13:1343,51,0	1/1:2,9:12:24.08:644,24,0	1/1:3,8:10:30.09:805,30,0	1/1:2,12:15:27.05:610,27,0	1/1:1,11:15:30.10:625,30,0	0/0:15,0:15:45.11:0,45,870	1/1:3,11:14:27.08:655,27,0	1/1:3,8:12:12.52:428,13,0	0/0:11,0:11:30.09:0,30,591	1/1:1,18:20:60.21:1635,60,0	1/1:5,15:24:54.18:1484,54,0	1/1:2,2:6:12.04:347,12,0
chr10	13591853	.	AT	A	251.25	PASS	AB=0.909;AC=5;AF=0.089;AN=56;BaseQRankSum=4.230;DP=470;FS=0.853;HRun=11;HaplotypeScore=133.5034;InbreedingCoeff=0.7087;MQ=60.97;MQ0=3;MQRankSum=-1.340;QD=5.98;ReadPosRankSum=-0.420;VQSLOD=1.5077;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,2:35:62.57:0,63,862	0/0:8,0:7:18.05:0,18,192	0/0:16,0:13:20.45:0,20,177	0/0:7,0:6:9.01:0,9,88	0/0:22,2:24:10.85:0,11,504	1/1:3,14:17:38.95:320,39,0	1/1:3,2:5:5.91:42,6,0	0/0:36,1:36:59.35:0,59,798	0/0:18,0:18:48.12:0,48,512	0/0:20,0:19:30.08:0,30,320	0/0:9,0:9:18.05:0,18,192	0/0:13,0:13:27.05:0,27,280	0/0:16,0:16:35.12:0,35,357	0/0:9,0:9:21.05:0,21,224	0/0:13,0:13:39.10:0,39,415	0/1:18,2:20:1.17:1,0,399	0/0:29,0:28:72.18:0,72,768	0/0:20,0:20:51.13:0,51,544	0/0:15,0:13:30.08:0,30,319	0/0:20,0:20:57.10:0,57,595	0/0:9,0:9:11.95:0,12,113	0/0:5,0:5:9.02:0,9,96	0/0:7,0:7:12.03:0,12,128	0/0:7,0:7:12.02:0,12,121	0/0:16,0:16:33.07:0,33,344	0/0:22,0:22:57.10:0,57,595	0/0:30,0:30:74.57:0,75,722	0/0:20,0:21:56.95:0,57,581
chr10	13592038	.	G	GC	10747.84	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=6.642;DP=427;FS=3.363;HRun=5;HaplotypeScore=79.9738;InbreedingCoeff=0.9463;MQ=64.30;MQ0=11;MQRankSum=-1.613;QD=32.28;ReadPosRankSum=3.131;VQSLOD=5.5256;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:63.16:0,63,677	1/1:0,2:2:6.02:79,6,0	0/0:13,0:10:23.37:0,23,284	0/0:28,0:14:14.66:0,15,251	1/1:1,15:15:24.08:316,24,0	1/1:3,14:17:42.14:552,42,0	1/1:0,12:12:30.10:395,30,0	1/1:3,21:25:60.19:774,60,0	1/1:1,16:17:48.16:631,48,0	1/1:2,15:17:42.09:524,42,0	1/1:0,13:13:30.10:394,30,0	0/0:9,0:9:18.04:0,18,193	1/1:1,8:9:27.09:350,27,0	1/1:1,8:9:21.07:276,21,0	1/1:0,13:13:36.12:473,36,0	1/1:0,10:10:30.10:395,30,0	1/1:2,26:28:72.15:908,72,0	1/1:0,15:15:42.14:553,42,0	1/1:2,10:10:30.10:389,30,0	1/1:1,13:14:33.11:435,33,0	1/1:3,25:26:75.24:986,75,0	0/0:3,0:3:6.01:0,6,64	1/1:0,8:8:15.05:197,15,0	1/1:1,17:18:42.14:549,42,0	0/0:12,0:12:33.08:0,33,355	1/1:2,18:19:51.16:665,51,0	1/1:2,18:20:45.15:591,45,0	1/1:2,8:10:24.08:316,24,0
chr10	13592180	.	AT	A	8290.52	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=7.845;DP=401;FS=0.470;HRun=7;HaplotypeScore=47.1542;InbreedingCoeff=0.9338;MQ=66.88;MQ0=0;MQRankSum=-0.041;QD=27.00;ReadPosRankSum=0.668;VQSLOD=5.2367;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:81.22:0,81,983	1/1:1,8:9:21.05:214,21,0	0/0:7,0:6:8.89:0,9,81	0/0:5,0:5:10.94:0,11,72	1/1:1,25:26:72.16:733,72,0	0/0:16,0:16:42.13:0,42,528	0/0:11,0:11:29.97:0,30,321	1/1:2,34:36:99:1012,102,0	1/1:0,9:9:27.06:275,27,0	1/1:0,16:16:48.11:489,48,0	1/1:0,11:11:33.07:336,33,0	0/0:13,0:13:33.10:0,33,411	1/1:1,9:10:27.06:275,27,0	1/1:1,11:12:27.06:275,27,0	1/1:0,15:15:39.09:398,39,0	1/1:0,6:6:15.03:153,15,0	1/1:1,25:26:72.16:734,72,0	1/1:1,12:13:36.06:359,36,0	1/1:4,20:24:60.10:598,60,0	1/1:1,15:16:42.06:418,42,0	1/1:2,3:5:9.02:92,9,0	0/0:2,0:2:6.02:0,6,75	1/1:0,9:9:21.05:214,21,0	1/1:1,2:3:6.01:61,6,0	0/0:12,0:12:33.08:0,33,400	1/1:0,20:20:60.14:612,60,0	1/1:2,20:22:57.13:581,57,0	1/1:4,15:19:45.10:459,45,0
chr10	13592468	.	GGCCAGAAGAA	G	2874.65	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.503;DP=638;FS=0.000;HRun=0;HaplotypeScore=223.5250;InbreedingCoeff=0.9937;MQ=65.58;MQ0=1;MQRankSum=-8.989;QD=54.24;ReadPosRankSum=-1.965;VQSLOD=2.3557;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,120,6283	0/0:8,0:8:24.08:0,24,1220	0/0:21,0:19:54.16:0,54,2217	0/0:21,0:20:60.21:0,60,2980	0/0:32,0:32:84.06:0,84,4127	1/1:0,24:24:54.12:1675,54,0	1/1:7,22:29:39.13:1321,39,0	0/0:25,0:25:72.22:0,72,2994	0/0:37,0:37:99:0,111,5832	0/0:17,0:17:51.18:0,51,2701	0/0:7,0:7:21.07:0,21,1092	0/0:28,0:28:84.29:0,84,4444	0/0:21,0:21:57.20:0,57,2896	0/0:23,0:23:69.24:0,69,3715	0/0:33,0:33:99:0,99,4862	0/0:20,0:20:60.21:0,60,3196	0/0:30,0:30:90.31:0,90,4783	0/0:19,0:19:57.20:0,57,2963	0/0:20,0:20:60.21:0,60,3063	0/0:13,0:13:39.13:0,39,1866	0/0:56,0:56:99:0,169,8849	0/0:10,0:10:30.10:0,30,1612	0/0:10,0:10:21.07:0,21,928	0/0:30,0:30:90.31:0,90,4855	0/0:22,0:22:66.23:0,66,3151	0/0:23,0:23:69.24:0,69,3528	0/0:10,0:10:30.10:0,30,1378	0/0:9,0:9:27.09:0,27,1369
chr10	13593476	.	AC	A	15282.73	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=3.188;DP=639;FS=3.461;HRun=3;HaplotypeScore=105.8259;InbreedingCoeff=0.9991;MQ=77.68;MQ0=0;MQRankSum=-10.863;QD=32.94;ReadPosRankSum=3.974;VQSLOD=4.7997;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:96.26:0,96,1337	1/1:0,11:11:33.10:409,33,0	0/0:40,0:40:99:0,120,1685	0/0:34,0:34:78.73:0,79,1115	1/1:1,14:15:36.07:429,36,0	1/1:0,23:23:63.20:780,63,0	1/1:1,21:22:57.18:704,57,0	1/1:2,31:33:93.29:1153,93,0	1/1:2,26:28:78.24:966,78,0	1/1:1,27:28:81.25:1004,81,0	1/1:1,12:13:26.25:332,26,0	0/0:20,0:20:57.15:0,57,797	1/1:2,11:13:30.09:371,30,0	1/1:0,13:13:33.10:409,33,0	1/1:0,27:27:75.24:929,75,0	1/1:1,24:23:60.19:743,60,0	1/1:0,26:25:69.22:855,69,0	1/1:0,13:13:39.12:483,39,0	1/1:0,17:17:51.12:604,51,0	1/1:0,21:21:51.16:632,51,0	1/1:1,38:39:96.30:1189,96,0	0/0:26,0:26:72.24:0,72,1036	1/1:0,18:18:48.15:595,48,0	1/1:1,21:22:57.18:706,57,0	0/0:15,0:15:45.10:0,45,607	1/1:0,24:24:66.21:818,66,0	1/1:0,25:25:72.18:875,72,0	1/1:0,8:8:24.08:297,24,0
chr10	13593537	.	C	CA	19061.68	PASS	AB=0.824;AC=54;AF=0.964;AN=56;BaseQRankSum=-3.222;DP=531;FS=7.803;HRun=1;HaplotypeScore=164.5455;InbreedingCoeff=-0.0385;MQ=72.53;MQ0=0;MQRankSum=-7.456;QD=35.90;ReadPosRankSum=4.381;VQSLOD=3.7060;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,28:32:81.28:1291,81,0	1/1:1,11:12:30.10:478,30,0	0/1:17,5:22:99:246,0,234	0/1:20,5:25:99:253,0,262	1/1:1,22:23:39.13:620,39,0	1/1:2,10:12:29.94:478,30,0	1/1:1,16:17:39.11:597,39,0	1/1:4,22:25:72.24:1108,72,0	1/1:0,10:11:24.08:382,24,0	1/1:2,22:24:63.21:996,63,0	1/1:2,12:14:33.11:525,33,0	1/1:2,15:17:42.14:670,42,0	1/1:1,15:17:45.11:677,45,0	1/1:2,19:21:57.19:898,57,0	1/1:3,29:32:87.30:1376,87,0	1/1:2,25:25:63.21:1003,63,0	1/1:1,14:14:32.79:526,33,0	1/1:1,10:11:33.11:509,33,0	1/1:2,21:23:69.23:1092,69,0	1/1:2,17:20:41.41:645,41,0	1/1:1,16:17:23.82:372,24,0	1/1:1,12:13:36.12:574,36,0	1/1:2,15:17:39.13:610,39,0	1/1:1,12:13:21.54:335,22,0	1/1:2,15:17:36.12:573,36,0	1/1:0,25:25:69.24:1101,69,0	1/1:5,19:24:63.17:933,63,0	1/1:0,4:4:12.04:191,12,0
chr10	13593640	.	AC	A	10162.63	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=4.956;DP=538;FS=53.526;HRun=2;HaplotypeScore=320.6738;InbreedingCoeff=0.9411;MQ=53.26;MQ0=6;MQRankSum=-8.829;QD=20.08;ReadPosRankSum=4.783;VQSLOD=0.8118;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,26:30:77.01:682,77,0	1/1:0,11:11:33.01:302,33,0	0/0:16,0:15:34.93:0,35,297	0/0:16,0:16:41.35:0,41,405	1/1:6,10:16:26.78:218,27,0	1/1:1,9:10:27.01:249,27,0	1/1:3,12:15:43.55:369,44,0	1/1:8,18:25:56.59:544,57,0	1/1:4,15:18:44.69:395,45,0	1/1:4,20:24:63.46:544,63,0	1/1:1,14:15:21.61:164,22,0	1/1:1,15:16:47.57:391,48,0	1/1:1,19:21:59.90:527,60,0	1/1:3,21:24:65.68:579,66,0	1/1:6,21:27:73.21:643,73,0	1/1:4,11:13:33.04:320,33,0	1/1:10,26:34:75.81:595,76,0	1/1:1,14:15:42.03:414,42,0	1/1:11,10:20:38.13:325,38,0	1/1:5,18:22:49.07:362,49,0	1/1:5,14:17:23.44:197,23,0	1/1:4,20:24:52.37:425,52,0	1/1:3,8:10:20.79:172,21,0	1/1:7,20:24:48.95:427,49,0	1/1:0,9:9:23.75:203,24,0	1/1:6,17:22:56.10:480,56,0	1/1:6,20:25:70.54:581,71,0	1/1:1,2:3:6.01:56,6,0
chr10	13593641	.	CCA	C	16531.84	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=4.453;DP=517;FS=57.285;HRun=0;HaplotypeScore=286.7539;InbreedingCoeff=0.9430;MQ=55.50;MQ0=6;MQRankSum=-8.751;QD=34.23;ReadPosRankSum=5.190;VQSLOD=1.6995;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:29:79.10:1077,79,0	1/1:11,0:11:33.11:500,33,0	0/0:17,0:16:39.79:0,40,684	0/0:17,0:17:49.98:0,50,744	1/1:15,0:15:30.09:414,30,0	1/1:11,0:11:26.88:376,27,0	1/1:14,1:15:44.87:588,45,0	1/1:21,0:20:56.78:723,57,0	1/1:18,1:18:45.08:635,45,0	1/1:21,0:23:65.06:929,65,0	1/1:16,0:16:26.55:235,27,0	1/1:16,0:16:48.14:705,48,0	1/1:21,0:21:60.20:893,60,0	1/1:22,0:22:65.80:914,66,0	1/1:23,2:25:74.90:999,75,0	1/1:15,0:13:32.92:441,33,0	1/1:32,1:31:77.84:1117,78,0	1/1:14,0:14:41.94:573,42,0	1/1:14,0:13:39.10:541,39,0	1/1:21,2:23:53.67:689,54,0	1/1:18,0:16:23.82:268,24,0	1/1:23,1:24:53.71:778,54,0	1/1:10,1:10:21.06:300,21,0	1/1:26,0:23:47.79:609,48,0	1/1:9,0:9:24.08:364,24,0	1/1:21,1:21:57.06:819,57,0	1/1:23,3:25:71.86:957,72,0	1/1:3,0:3:6.02:90,6,0
chr10	13593643	.	AC	A	8940.13	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=5.324;DP=542;FS=58.814;HRun=4;HaplotypeScore=310.2125;InbreedingCoeff=0.9509;MQ=57.15;MQ0=6;MQRankSum=-9.383;QD=17.67;ReadPosRankSum=5.297;VQSLOD=0.6696;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,23:30:74.24:603,74,0	1/1:0,11:11:32.93:271,33,0	0/0:17,1:17:15.50:0,15,506	0/0:17,1:18:29.28:0,29,549	1/1:6,10:16:29.96:254,30,0	1/1:2,9:11:26.89:211,27,0	1/1:4,12:16:37.94:291,38,0	1/1:6,15:20:47.95:418,48,0	1/1:4,15:18:41.89:337,42,0	1/1:6,16:24:62.14:483,62,0	1/1:5,13:18:17.97:172,18,0	1/1:0,16:16:47.68:360,48,0	1/1:4,19:23:59.66:472,60,0	1/1:4,19:23:59.80:477,60,0	1/1:5,20:25:64.48:503,64,0	1/1:7,9:14:26.97:225,27,0	1/1:4,29:31:79.32:636,79,0	1/1:2,12:14:35.91:315,36,0	1/1:3,11:13:38.89:337,39,0	1/1:10,16:25:33.45:398,33,0	1/1:6,12:16:17.96:146,18,0	1/1:3,20:24:50.58:381,51,0	1/1:6,8:13:23.94:198,24,0	1/1:7,20:24:38.79:314,39,0	1/1:3,8:11:23.55:180,24,0	1/1:6,17:22:55.69:432,56,0	1/1:11,18:28:61.54:455,62,0	1/1:2,2:4:8.96:71,9,0
chr10	13593644	.	C	CA	7923.89	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-0.418;DP=601;FS=26.172;HRun=1;HaplotypeScore=334.5852;InbreedingCoeff=0.9151;MQ=56.32;MQ0=6;MQRankSum=-4.835;QD=14.05;ReadPosRankSum=7.131;VQSLOD=1.9502;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:31,1:32:63.99:531,64,0	1/1:11,0:11:31.96:192,32,0	0/0:19,0:18:15.46:0,15,446	0/0:18,0:18:32.13:0,32,505	1/1:14,8:22:35.24:314,35,0	1/1:11,0:11:24.81:143,25,0	1/1:20,0:20:31.17:371,31,0	1/1:22,2:23:30.08:389,30,0	1/1:18,1:18:39.73:256,40,0	1/1:30,0:30:62.65:454,63,0	1/1:21,0:21:10.85:250,11,0	1/1:18,0:18:48.73:321,49,0	1/1:25,0:25:59.69:346,60,0	1/1:24,0:24:45:332,45,0	1/1:26,0:26:45.73:390,46,0	1/1:11,5:14:16.40:140,16,0	1/1:36,1:35:74.90:612,75,0	1/1:14,0:14:18.44:219,18,0	1/1:13,3:15:40.57:353,41,0	1/1:30,0:29:19.93:430,20,0	1/1:19,2:19:13:194,13,0	1/1:23,1:24:31.31:335,31,0	1/1:14,2:15:23.46:178,23,0	1/1:32,2:31:29.71:280,30,0	1/1:11,0:11:20.76:113,21,0	1/1:28,1:28:55.12:407,55,0	1/1:27,2:28:35.87:323,36,0	1/1:3,1:4:8.83:54,9,0
chr10	13594180	.	GGA	G	4335.35	PASS	AB=0.667;AC=39;AF=0.750;AN=52;BaseQRankSum=9.520;DP=303;FS=3.822;HRun=0;HaplotypeScore=102.2218;InbreedingCoeff=0.7950;MQ=51.16;MQ0=12;MQRankSum=-6.513;QD=20.16;ReadPosRankSum=-1.090;VQSLOD=4.7919;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:28:64.72:0,65,1394	0/1:3,3:4:7.80:49,0,8	0/0:13,0:6:11.87:0,12,159	0/0:12,1:9:2.92:0,3,191	1/1:0,14:14:20.91:278,21,0	./.	./.	1/1:7,9:13:29.86:406,30,0	1/1:7,5:11:17.63:188,18,0	1/1:7,5:10:26.29:250,26,0	1/1:3,6:9:17.83:188,18,0	0/0:6,0:6:18.06:0,18,357	1/1:5,4:8:23.86:200,24,0	1/1:7,6:11:26.53:212,27,0	1/1:6,3:9:24.05:253,24,0	1/1:1,7:8:14.89:182,15,0	1/1:7,3:10:18.02:207,18,0	1/1:0,7:7:9.03:135,9,0	1/1:2,5:5:15.02:207,15,0	1/1:0,19:18:27.01:310,27,0	1/1:3,3:5:5.61:56,6,0	0/0:9,0:9:18.06:0,18,333	1/1:8,10:17:41.94:423,42,0	1/1:1,6:6:6:60,6,0	0/0:17,0:17:47.92:0,48,779	1/1:8,4:12:35.76:293,36,0	1/1:9,6:13:22.62:266,23,0	1/1:0,6:4:12.03:171,12,0
chr10	13594192	.	A	AGGG	1005.25	PASS	AB=0.842;AC=15;AF=0.288;AN=52;BaseQRankSum=2.975;DP=321;FS=10.539;HRun=0;HaplotypeScore=138.6137;InbreedingCoeff=-0.4191;MQ=55.07;MQ0=9;MQRankSum=-4.642;QD=5.35;ReadPosRankSum=0.698;VQSLOD=2.1117;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:84.29:0,84,1547	0/0:5,1:4:8.25:0,8,77	0/0:16,0:8:20.43:0,20,301	0/0:15,0:10:23.24:0,23,305	0/1:13,1:14:22.22:22,0,209	./.	./.	0/1:18,2:17:58.49:58,0,422	0/1:12,3:14:99:111,0,150	0/0:15,0:13:15.27:0,15,329	0/1:7,2:9:27.85:28,0,87	0/0:8,0:8:24.05:0,24,409	0/0:8,0:7:0.34:0,0,148	0/1:10,1:9:44.34:44,0,157	0/1:7,3:10:65.65:66,0,141	0/1:10,3:13:99:197,0,145	0/1:9,1:10:32.03:32,0,114	0/0:4,0:4:5.94:0,6,23	0/0:9,0:6:15.04:0,15,245	0/1:12,1:12:30.01:30,0,113	0/1:5,2:7:7.60:81,0,8	0/0:6,0:6:18.06:0,18,317	0/1:13,5:17:55.54:56,0,300	0/1:7,1:7:35.95:36,0,88	0/0:16,0:16:45.15:0,45,776	0/1:8,5:13:99:147,0,226	0/1:15,4:17:99:169,0,315	0/1:6,2:6:76.38:76,0,158
chr10	13594198	.	A	AAAAGAGAGGGAGAGAG	23980.96	PASS	AC=40;AF=0.769;AN=52;BaseQRankSum=6.297;DP=361;FS=9.804;HRun=0;HaplotypeScore=174.0062;InbreedingCoeff=0.9032;MQ=61.58;MQ0=5;MQRankSum=-10.478;QD=90.49;ReadPosRankSum=-1.118;VQSLOD=3.9293;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:84.28:0,84,3514	1/1:5,2:5:12.04:661,12,0	0/0:18,0:10:24.08:0,24,751	0/0:19,0:14:32.74:0,33,655	1/1:10,4:15:19.20:922,19,0	./.	./.	1/1:18,0:16:30.11:1085,30,0	1/1:16,5:20:38.62:2231,39,0	1/1:9,2:15:45.06:1889,45,0	1/1:9,3:12:20.43:1116,20,0	0/0:8,0:8:24.08:0,24,925	1/1:6,3:9:27.09:1534,27,0	1/1:12,2:15:29.13:1184,29,0	1/1:11,3:14:31.77:1424,32,0	1/1:16,1:18:39.13:2169,39,0	1/1:9,1:10:3.71:715,4,0	1/1:5,1:6:12.04:567,12,0	1/1:9,0:7:12.09:74,12,0	1/1:12,2:13:14.70:896,15,0	1/1:6,3:9:15.52:954,16,0	0/0:6,0:6:15.04:0,15,633	1/1:14,5:19:28.79:1398,29,0	1/1:6,2:8:5.38:241,5,0	0/0:14,0:14:30.08:0,30,1249	1/1:10,4:14:39.12:2303,39,0	1/1:18,2:19:44.06:2014,44,0	1/1:7,1:6:9.03:607,9,0
chr10	13594307	.	G	GTGT	4167.70	PASS	AC=38;AF=0.731;AN=52;BaseQRankSum=4.164;DP=199;FS=49.185;HRun=0;HaplotypeScore=63.5455;InbreedingCoeff=0.7432;MQ=74.54;MQ0=0;MQRankSum=-6.911;QD=30.87;ReadPosRankSum=1.496;VQSLOD=1.8354;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:21.03:0,21,343	1/1:2,3:5:7.82:128,8,0	0/0:10,0:9:20.11:0,20,333	0/0:15,0:12:23.25:0,23,394	0/0:1,6:8:0:0,0,0	./.	./.	1/1:2,4:7:14.41:195,14,0	1/1:1,6:8:18.06:363,18,0	1/1:3,7:10:27.08:456,27,0	1/1:0,5:5:6.02:127,6,0	0/0:9,0:9:24.07:0,24,410	1/1:1,6:8:15.05:321,15,0	1/1:8,3:12:24.02:459,24,0	1/1:1,7:8:15.04:321,15,0	1/1:5,1:7:15.02:267,15,0	1/1:2,2:5:9.03:167,9,0	1/1:1,5:7:6.02:132,6,0	1/1:0,3:4:11.99:176,12,0	1/1:0,3:3:3.01:63,3,0	1/1:2,15:18:5.52:128,6,0	0/0:4,0:4:9.03:0,9,144	1/1:1,7:8:9.03:192,9,0	1/1:2,5:8:8.82:197,9,0	0/0:4,0:4:9.01:0,9,83	1/1:0,0:6:9.03:151,9,0	1/1:0,5:3:12.04:258,12,0	1/1:0,1:1:3.01:67,3,0
chr10	13594316	.	GC	G	1883.57	PASS	AC=40;AF=0.769;AN=52;BaseQRankSum=4.870;DP=224;FS=11.153;HRun=1;HaplotypeScore=65.2669;InbreedingCoeff=0.7666;MQ=79.27;MQ0=0;MQRankSum=-6.933;QD=11.56;ReadPosRankSum=-0.710;VQSLOD=0.4357;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:41.84:0,42,397	1/1:4,1:5:14.14:87,14,0	0/0:10,0:9:23.99:0,24,238	0/0:14,0:12:2.84:0,3,157	1/1:6,1:7:7.63:32,8,0	./.	./.	1/1:5,1:6:8.66:59,9,0	1/1:14,2:15:37.27:236,37,0	1/1:10,2:13:34.85:259,35,0	1/1:6,0:6:12.44:63,12,0	0/0:9,0:9:27.04:0,27,306	1/1:11,1:12:30.99:173,31,0	1/1:3,9:12:20.52:129,21,0	1/1:10,0:10:28.15:154,28,0	1/1:1,7:8:8.61:51,9,0	1/1:3,4:7:11.28:60,11,0	1/1:4,1:5:14.56:95,15,0	1/1:2,1:3:8.47:46,8,0	1/1:4,0:4:7.43:45,7,0	1/1:15,2:17:22.96:158,23,0	0/0:5,0:5:14.97:0,15,148	1/1:3,1:4:10.21:53,10,0	1/1:11,1:12:22.78:157,23,0	0/0:4,0:4:2.48:0,2,38	1/1:2,0:2:4.81:30,5,0	1/1:11,0:9:6.78:105,7,0	1/1:3,0:3:8.68:63,9,0
chr10	13594462	.	A	AC	13052.50	PASS	AC=40;AF=0.769;AN=52;BaseQRankSum=10.642;DP=488;FS=3.344;HRun=4;HaplotypeScore=92.7819;InbreedingCoeff=0.9927;MQ=72.98;MQ0=0;MQRankSum=-2.231;QD=34.90;ReadPosRankSum=2.484;VQSLOD=5.1080;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:96.22:0,96,1072	1/1:0,9:9:27.09:369,27,0	0/0:20,0:20:42.12:0,42,476	0/0:15,0:15:37.34:0,37,402	1/1:0,12:12:27.09:369,27,0	./.	./.	1/1:2,22:24:63.19:845,63,0	1/1:1,23:24:63.21:861,63,0	1/1:1,14:15:39.11:516,39,0	1/1:0,9:9:24.08:328,24,0	0/0:21,0:21:57.16:0,57,646	1/1:0,14:14:39.09:511,39,0	1/1:0,21:21:60.20:819,60,0	1/1:1,20:21:57.19:779,57,0	1/1:1,16:17:45.15:615,45,0	1/1:3,17:20:48.16:657,48,0	1/1:2,16:18:48.16:657,48,0	1/1:0,8:8:24.08:328,24,0	1/1:2,5:7:15:170,15,0	1/1:4,70:75:99:2421,178,0	0/0:13,0:13:33.04:0,33,350	1/1:0,9:9:21.07:287,21,0	1/1:2,25:27:66.22:903,66,0	0/0:10,0:10:30.04:0,30,326	1/1:1,23:24:66.22:902,66,0	1/1:1,13:14:36.08:471,36,0	1/1:0,6:6:18.06:246,18,0
chr10	13594968	.	TAAA	T	10096.62	PASS	AB=0.783;AC=40;AF=0.714;AN=56;BaseQRankSum=2.190;DP=602;FS=5.600;HRun=14;HaplotypeScore=103.6517;InbreedingCoeff=0.8108;MQ=67.93;MQ0=9;MQRankSum=-1.956;QD=22.79;ReadPosRankSum=4.688;VQSLOD=4.0881;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:28:67.01:0,67,987	1/1:0,11:12:36.04:403,36,0	0/0:32,0:20:29.81:0,30,308	0/1:27,0:18:18.50:18,0,117	1/1:5,32:40:70.04:999,70,0	0/0:3,0:19:16.20:0,16,35	0/0:4,0:13:8.72:0,9,19	1/1:5,22:27:66.11:750,66,0	1/1:2,18:20:36.10:418,36,0	1/1:3,20:23:57.12:666,57,0	1/1:5,18:23:38.93:455,39,0	0/0:18,0:19:51.13:0,51,834	1/1:5,11:16:32.94:368,33,0	1/1:4,10:16:28.55:331,29,0	1/1:4,13:18:26.96:298,27,0	1/1:3,10:14:28.63:348,29,0	1/1:2,24:26:60.15:701,60,0	1/1:2,12:16:35.95:386,36,0	0/1:3,5:9:21.39:186,0,21	1/1:6,28:34:69.02:805,69,0	1/1:4,7:11:16.49:208,16,0	0/0:18,0:20:54.07:0,54,847	1/1:4,18:21:44.96:491,45,0	1/1:2,9:11:24.02:281,24,0	0/0:21,0:23:47.62:0,48,757	1/1:2,22:24:63:722,63,0	1/1:4,25:30:59.78:683,60,0	1/1:0,19:20:51.08:579,51,0
chr10	13595174	.	C	CACTCCTCCATTGCTGGTGGGAATGCAA	120801.98	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=9.424;DP=671;FS=1.214;HRun=0;HaplotypeScore=432.8521;InbreedingCoeff=0.9991;MQ=63.55;MQ0=1;MQRankSum=-16.103;QD=226.22;ReadPosRankSum=1.691;VQSLOD=4.2869;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:84.28:0,84,4796	1/1:14,2:16:48.16:4365,48,0	0/0:28,0:28:75.26:0,75,3476	0/0:18,0:18:48.16:0,48,2364	1/1:20,2:24:63.14:4835,63,0	1/1:18,2:21:60.16:5082,60,0	1/1:24,0:24:66.23:5614,66,0	1/1:33,0:31:72.21:3010,72,0	1/1:23,2:27:72.20:7170,72,0	1/1:24,0:22:54.15:3941,54,0	1/1:17,0:17:42.06:1997,42,0	0/0:32,0:32:93.30:0,93,6147	1/1:28,4:35:93.32:9730,93,0	1/1:16,3:21:60.21:6397,60,0	1/1:37,4:41:99:11879,120,0	1/1:23,3:29:78.22:7171,78,0	1/1:10,4:14:36.12:4355,36,0	1/1:9,1:13:24.08:1999,24,0	1/1:13,1:18:48.16:3388,48,0	1/1:18,2:20:57.20:5036,57,0	1/1:25,0:25:69.15:4739,69,0	0/0:14,0:14:38.48:0,38,2423	1/1:21,1:23:51.17:4941,51,0	1/1:19,2:27:51.13:4093,51,0	0/0:15,0:15:42.14:0,42,2708	1/1:21,6:28:75.26:7742,75,0	1/1:34,9:46:99:11572,126,0	1/1:7,1:8:24.08:1748,24,0
chr10	13595764	.	A	AC	13034.31	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=12.911;DP=436;FS=8.941;HRun=0;HaplotypeScore=95.0612;InbreedingCoeff=0.9971;MQ=80.67;MQ0=0;MQRankSum=-4.248;QD=39.26;ReadPosRankSum=1.730;VQSLOD=4.8238;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:54.18:0,54,754	1/1:0,6:6:18.06:255,18,0	0/0:17,0:17:42.13:0,42,551	0/0:15,0:15:45.04:0,45,521	1/1:1,15:16:39.13:555,39,0	1/1:0,15:15:45.06:605,45,0	1/1:0,14:14:42.06:575,42,0	1/1:1,23:24:63.18:854,63,0	1/1:0,18:18:45.15:640,45,0	1/1:0,14:14:42.14:584,42,0	1/1:0,15:15:39.13:555,39,0	0/0:25,0:25:75.24:0,75,1032	1/1:0,20:20:57.12:786,57,0	1/1:0,9:9:27.09:388,27,0	1/1:0,18:18:54.18:767,54,0	1/1:0,12:12:36.12:513,36,0	1/1:0,14:14:36.12:509,36,0	1/1:0,7:7:21.07:299,21,0	1/1:0,13:13:39.12:537,39,0	1/1:0,18:18:48.16:681,48,0	1/1:1,16:17:48.16:679,48,0	0/0:13,0:13:33.11:0,33,459	1/1:0,14:14:39.13:554,39,0	1/1:2,20:22:57.19:806,57,0	0/0:16,0:16:48.16:0,48,670	1/1:0,14:15:45.12:584,45,0	1/1:0,17:17:51.17:717,51,0	1/1:0,14:14:42.14:590,42,0
chr10	13595937	.	ATCT	A	2961.70	PASS	AC=38;AF=0.760;AN=50;BaseQRankSum=11.466;DP=191;FS=8.741;HRun=0;HaplotypeScore=132.0209;InbreedingCoeff=0.7671;MQ=79.51;MQ0=1;MQRankSum=-9.520;QD=34.84;ReadPosRankSum=5.872;VQSLOD=3.5659;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:60.21:0,60,1442	1/1:0,4:4:12.04:151,12,0	0/0:18,0:16:48.15:0,48,1107	0/0:20,0:18:51.14:0,51,1129	1/1:0,8:8:21.07:262,21,0	1/1:0,5:5:15.05:189,15,0	1/1:0,1:1:3.01:38,3,0	./.	1/1:0,2:2:6.02:76,6,0	1/1:0,6:6:18.06:230,18,0	1/1:1,8:9:24.08:300,24,0	0/0:18,0:18:51.16:0,51,1202	1/1:0,6:6:18.06:227,18,0	1/1:0,2:2:6.02:74,6,0	1/1:0,2:2:6.02:77,6,0	1/1:0,1:1:3.01:39,3,0	1/1:0,5:5:15.05:189,15,0	./.	1/1:0,2:2:6.02:78,6,0	1/1:0,10:10:30.10:378,30,0	1/1:0,1:1:3.01:38,3,0	0/0:13,0:13:33.11:0,33,789	1/1:0,11:11:33.11:412,33,0	./.	0/0:14,0:14:39.13:0,39,959	1/1:0,5:5:15.05:189,15,0	1/1:0,4:4:12.04:154,12,0	1/1:0,1:1:3.01:39,3,0
chr10	13595941	.	AATTGAGTTGTTGGTCAC	A	11056.01	PASS	AC=38;AF=0.760;AN=50;BaseQRankSum=10.996;DP=185;FS=6.453;HRun=0;HaplotypeScore=157.2306;InbreedingCoeff=0.7675;MQ=69.10;MQ0=1;MQRankSum=-9.252;QD=131.62;ReadPosRankSum=5.027;VQSLOD=3.9714;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:54.18:0,54,3688	1/1:0,4:4:12.04:530,12,0	0/0:16,0:14:39.13:0,39,1934	0/0:19,0:17:46.35:0,46,2546	1/1:0,8:8:24.08:971,24,0	1/1:0,5:5:15.05:663,15,0	1/1:0,1:1:3.01:133,3,0	./.	1/1:0,2:2:6.02:265,6,0	1/1:0,6:6:18.06:798,18,0	1/1:0,8:8:24.08:1059,24,0	0/0:18,0:18:51.17:0,51,3366	1/1:0,6:6:18.06:795,18,0	1/1:0,2:2:6.02:264,6,0	1/1:0,2:2:6.02:267,6,0	1/1:0,1:1:3.01:134,3,0	1/1:0,5:5:15.05:663,15,0	./.	1/1:0,2:2:6.02:267,6,0	1/1:0,10:10:30.10:1327,30,0	1/1:0,1:1:3.01:133,3,0	0/0:13,0:13:39.12:0,39,2563	1/1:0,11:11:33.11:1456,33,0	./.	0/0:14,0:14:42.14:0,42,2581	1/1:0,5:5:15.05:663,15,0	1/1:0,4:4:12.04:536,12,0	1/1:0,1:1:3.01:134,3,0
chr10	13597179	.	TTATA	T	4405.54	PASS	AB=1.000;AC=37;AF=0.771;AN=48;BaseQRankSum=-3.733;DP=211;FS=1.740;HRun=0;HaplotypeScore=45.3553;InbreedingCoeff=0.5514;MQ=91.93;MQ0=1;MQRankSum=-0.983;QD=31.24;ReadPosRankSum=2.932;VQSLOD=4.6326;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:3,0:3:9.03:0,9,169	./.	0/0:10,0:6:15.03:0,15,162	0/0:49,0:26:33.54:0,34,373	1/1:2,0:1:3.01:43,3,0	0/1:4,0:4:7.25:7,0,113	./.	1/1:1,39:40:99:1638,114,0	1/1:0,2:2:3.01:60,3,0	1/1:1,0:1:3.01:43,3,0	1/1:0,7:7:21.03:328,21,0	0/0:3,0:3:9.03:0,9,112	1/1:0,3:3:9.03:179,9,0	1/1:0,5:5:6.02:120,6,0	1/1:0,2:2:3.01:60,3,0	1/1:0,2:2:6.02:120,6,0	1/1:2,16:18:13.28:297,13,0	1/1:0,22:22:24.08:479,24,0	1/1:0,9:9:24.08:408,24,0	1/1:0,2:2:3.01:60,3,0	1/1:0,6:6:3.01:60,3,0	./.	./.	1/1:0,2:2:3.01:60,3,0	0/0:4,0:4:12.04:0,12,195	1/1:0,5:5:12.03:171,12,0	1/1:0,4:4:3.01:60,3,0	1/1:5,0:5:15.05:214,15,0
chr10	13597183	.	A	AT	1841.67	PASS	AC=38;AF=0.792;AN=48;BaseQRankSum=-2.403;DP=209;FS=1.900;HRun=2;HaplotypeScore=45.0327;InbreedingCoeff=0.6107;MQ=89.72;MQ0=1;MQRankSum=-1.844;QD=12.36;ReadPosRankSum=4.309;VQSLOD=2.4729;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:4:9.03:0,9,111	./.	0/0:11,0:6:14.97:0,15,142	0/0:36,0:22:18.93:0,19,306	1/1:2,1:2:3.01:43,3,0	1/1:2,4:6:12.04:173,12,0	./.	1/1:40,0:40:66.60:965,67,0	1/1:2,0:2:1.82:5,2,0	1/1:0,1:1:3.01:43,3,0	1/1:7,0:7:17.45:163,17,0	0/0:3,0:3:9.03:0,9,112	1/1:3,0:3:5.67:15,6,0	1/1:5,0:5:3.63:10,4,0	1/1:2,0:2:1.82:5,2,0	1/1:2,0:2:3.63:10,4,0	1/1:17,0:18:9.08:24,9,0	1/1:22,0:22:14.54:39,15,0	1/1:9,0:9:19.31:188,19,0	1/1:2,0:2:1.82:5,2,0	1/1:6,0:6:1.82:5,2,0	./.	./.	1/1:2,0:2:1.82:5,2,0	0/0:4,0:4:12.04:0,12,149	1/1:5,0:5:10.83:116,11,0	1/1:5,0:5:1.82:5,2,0	1/1:1,8:9:12.03:173,12,0
chr10	13597313	.	TA	T	5390.61	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-1.464;DP=257;FS=17.632;HRun=9;HaplotypeScore=64.3870;InbreedingCoeff=0.6438;MQ=65.55;MQ0=2;MQRankSum=-3.565;QD=22.55;ReadPosRankSum=1.608;VQSLOD=3.8241;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,22:24:56.95:511,57,0	1/1:0,2:2:6:55,6,0	0/0:7,0:4:6.02:0,6,65	0/0:10,0:9:24.03:0,24,250	1/1:1,7:8:20.97:184,21,0	1/1:2,9:11:27.01:247,27,0	1/1:1,9:10:27.01:246,27,0	1/1:4,24:28:69.03:631,69,0	1/1:0,10:10:27.01:246,27,0	1/1:1,8:9:23.97:211,24,0	1/1:0,7:7:20.97:183,21,0	1/1:2,15:17:42.02:384,42,0	1/1:0,2:2:6:55,6,0	1/1:0,3:3:8.96:74,9,0	1/1:1,6:7:18.01:165,18,0	1/1:1,6:7:18.01:165,18,0	1/1:0,17:17:42.02:384,42,0	1/1:1,4:5:12:110,12,0	1/1:1,14:15:41.91:369,42,0	1/1:1,8:9:14.95:129,15,0	1/1:2,6:8:15.01:137,15,0	1/1:0,2:2:6:55,6,0	1/1:0,2:2:6:55,6,0	1/1:0,5:5:12.01:110,12,0	1/1:1,6:7:18.01:165,18,0	1/1:0,11:11:32.94:282,33,0	1/1:1,9:10:23.97:211,24,0	1/1:2,1:3:3:27,3,0
chr10	13597583	.	CT	C	73.29	PASS	AB=0.967;AC=7;AF=0.125;AN=56;BaseQRankSum=4.526;DP=465;FS=4.410;HRun=13;HaplotypeScore=90.3115;InbreedingCoeff=0.4904;MQ=69.69;MQ0=3;MQRankSum=-0.093;QD=0.86;ReadPosRankSum=1.202;VQSLOD=-0.6427;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,2:25:37.62:0,38,481	0/0:9,0:9:13.20:0,13,98	0/0:27,0:12:17.13:0,17,107	0/0:17,0:10:4.49:0,4,75	0/0:25,0:25:25.10:0,25,271	1/1:24,0:24:35.71:112,36,0	1/1:12,0:12:24.42:75,24,0	0/0:25,0:25:19.65:0,20,205	0/0:11,0:11:15.62:0,16,112	0/0:22,0:22:32.88:0,33,222	0/0:19,0:19:24.57:0,25,243	0/0:12,0:12:26.98:0,27,251	0/1:15,0:14:5.20:5,0,111	0/0:6,0:6:10.63:0,11,59	0/0:16,0:16:23.42:0,23,147	0/1:16,0:16:4.47:4,0,119	0/0:21,0:21:27.65:0,28,199	0/0:11,0:10:7.78:0,8,73	0/0:10,0:9:14.55:0,15,87	0/0:21,0:21:44.34:0,44,291	0/0:10,0:10:20.67:0,21,134	0/0:7,0:7:14.98:0,15,136	0/0:11,0:11:9.71:0,10,82	0/0:8,0:8:13.98:0,14,90	0/1:14,2:18:8.11:8,0,217	0/0:20,0:20:32.82:0,33,201	0/0:35,0:35:58.07:0,58,312	0/0:12,0:12:23.07:0,23,159
chr10	13597595	.	TTAA	T	4229.73	PASS	AB=0.987;AC=29;AF=0.518;AN=56;BaseQRankSum=8.759;DP=456;FS=26.023;HRun=0;HaplotypeScore=91.0085;InbreedingCoeff=-0.0077;MQ=69.28;MQ0=3;MQRankSum=-1.748;QD=11.78;ReadPosRankSum=5.628;VQSLOD=2.2407;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:69.19:0,69,1316	0/1:10,0:10:19.59:104,0,20	0/0:28,0:11:24:0,24,319	0/0:17,0:10:8.17:0,8,248	0/1:24,0:25:99:196,0,130	1/1:2,24:26:48.16:731,48,0	1/1:0,15:15:33.11:515,33,0	0/1:30,1:31:10.49:583,0,10	0/1:9,0:9:23.93:75,0,24	1/1:17,0:18:42.17:205,42,0	0/1:19,0:19:15.84:195,0,16	0/0:9,0:9:27.09:0,27,591	0/1:15,0:14:4.77:83,0,5	0/1:7,0:7:10.06:10,0,27	0/1:15,0:15:9.85:73,0,10	0/1:16,1:17:18.99:112,0,19	1/1:21,0:21:25.75:175,26,0	1/1:10,0:10:15.77:63,16,0	1/1:9,0:8:22.50:160,23,0	0/1:22,0:22:51.51:219,0,52	0/1:9,0:9:5.80:46,0,6	0/0:6,0:6:18.05:0,18,338	0/1:12,1:13:2.13:138,0,2	0/1:10,0:10:31.85:47,0,32	0/0:13,0:13:39.12:0,39,705	0/1:17,0:17:30.36:188,0,30	1/1:30,1:31:30.21:275,30,0	0/1:10,0:10:38.84:39,0,76
chr10	13597596	.	TAA	T	8795.55	PASS	AB=0.556;AC=43;AF=0.768;AN=56;BaseQRankSum=2.965;DP=449;FS=1.759;HRun=6;HaplotypeScore=68.3286;InbreedingCoeff=0.8612;MQ=69.47;MQ0=3;MQRankSum=-1.366;QD=24.85;ReadPosRankSum=0.365;VQSLOD=3.5111;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:63.20:0,63,998	1/1:1,8:10:21.06:259,21,0	0/0:26,0:10:20.77:0,21,226	0/0:18,0:11:11.73:0,12,183	1/1:6,18:25:39.10:481,39,0	1/1:25,1:26:47.94:397,48,0	1/1:15,0:15:32.96:274,33,0	1/1:5,23:31:78.18:966,78,0	1/1:2,7:9:18.05:223,18,0	1/1:1,15:17:45.15:589,45,0	1/1:2,17:19:42.08:546,42,0	0/0:9,0:9:27.09:0,27,452	1/1:5,10:14:20.48:279,20,0	1/1:2,5:7:6.02:80,6,0	1/1:1,12:14:27.07:350,27,0	1/1:4,11:16:26.75:321,27,0	1/1:1,15:20:51.15:634,51,0	1/1:2,8:10:15.04:200,15,0	1/1:0,9:8:24.04:296,24,0	1/1:4,17:21:45.11:568,45,0	1/1:1,8:9:18.06:240,18,0	0/0:6,0:6:15.05:0,15,248	1/1:3,10:13:21.05:255,21,0	0/1:2,7:10:18.67:208,0,19	0/0:13,0:13:39.11:0,39,551	1/1:3,13:17:39.12:503,39,0	1/1:3,28:31:69.21:900,69,0	1/1:4,5:10:18.05:227,18,0
chr10	13599269	.	CACACACACACAA	C	659.66	PASS	AB=0.991;AC=10;AF=0.179;AN=56;BaseQRankSum=-4.280;DP=543;FS=2.299;HRun=0;HaplotypeScore=158.8059;InbreedingCoeff=0.0919;MQ=51.31;MQ0=10;MQRankSum=-0.663;QD=5.59;ReadPosRankSum=-3.060;VQSLOD=2.0730;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:39.57:0,40,1550	0/1:5,0:5:2.95:3,0,349	0/0:15,0:6:18.02:0,18,182	0/0:24,0:16:32.95:0,33,433	0/0:25,0:25:18.06:0,18,690	1/1:2,4:5:3.01:114,3,0	1/1:2,8:10:3.01:114,3,0	0/1:15,0:14:99:177,0,302	0/1:21,0:20:68.53:69,0,776	0/1:13,0:13:73.68:74,0,554	0/0:15,0:15:21.49:0,21,689	0/0:25,0:25:72.16:0,72,2103	0/0:22,0:22:14.56:0,15,440	0/0:20,0:20:9.02:0,9,236	0/0:31,0:31:18.26:0,18,589	0/0:26,0:26:24.55:0,25,863	0/0:19,0:19:6.47:0,6,131	0/0:25,0:24:33.72:0,34,1131	0/1:16,0:17:99:181,0,330	0/0:13,0:13:6.02:0,6,198	0/1:31,0:29:61.91:62,0,617	0/0:21,0:21:43.67:0,44,1466	0/0:18,0:18:9.03:0,9,338	0/0:25,0:25:9.50:0,10,330	0/0:20,0:18:51.56:0,52,1550	0/0:25,0:25:0.32:0,0,1762	0/0:24,0:24:21.53:0,22,760	0/0:16,0:15:18.06:0,18,593
chr10	13599277	.	CACAA	C	1811.32	PASS	AB=0.906;AC=29;AF=0.518;AN=56;BaseQRankSum=-1.851;DP=532;FS=0.540;HRun=0;HaplotypeScore=101.5018;InbreedingCoeff=0.2723;MQ=56.47;MQ0=8;MQRankSum=-3.296;QD=5.24;ReadPosRankSum=0.924;VQSLOD=2.0397;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:42.09:0,42,650	0/1:6,1:7:74.42:99,0,74	0/0:16,0:7:19.57:0,20,186	0/0:25,0:19:41.87:0,42,473	0/1:13,12:25:46.52:47,0,82	1/1:6,0:5:3.01:39,3,0	1/1:8,0:8:3.01:39,3,0	1/1:17,0:16:27.02:319,27,0	0/1:17,2:18:13.39:208,0,13	1/1:13,0:13:13.91:214,14,0	0/0:13,0:13:5.78:0,6,39	0/0:23,0:23:62.80:0,63,792	1/1:20,1:21:2.35:58,2,0	1/1:20,0:20:2.53:38,3,0	1/1:33,1:34:0.78:56,1,0	0/0:27,0:27:7.90:0,8,69	1/1:17,0:17:1.79:39,2,0	0/1:24,1:24:0.47:52,0,0	1/1:17,0:17:20.70:309,21,0	0/0:13,0:13:0:0,0,0	1/1:33,0:31:18.76:162,19,0	0/0:16,0:16:25.73:0,26,386	0/0:15,0:15:3.48:0,3,35	1/1:28,0:28:1.99:17,2,0	0/0:22,0:20:45.51:0,46,530	0/1:21,0:21:67.37:160,0,67	0/1:23,0:23:30.41:30,0,65	0/1:11,1:12:23.11:98,0,23
chr10	13599279	.	CAA	C	4093.76	PASS	AB=1.000;AC=43;AF=0.768;AN=56;BaseQRankSum=1.913;DP=497;FS=14.218;HRun=4;HaplotypeScore=72.3145;InbreedingCoeff=0.6944;MQ=57.60;MQ0=8;MQRankSum=-4.876;QD=10.74;ReadPosRankSum=1.185;VQSLOD=-0.4304;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:38.53:0,39,442	0/1:7,0:7:12.38:68,0,12	0/0:16,0:7:19.83:0,20,187	0/0:25,0:19:41.87:0,42,473	1/1:15,2:17:6.01:70,6,0	1/1:6,0:5:3:25,3,0	1/1:8,0:8:3:25,3,0	1/1:18,0:17:47.67:388,48,0	1/1:19,2:20:44.30:357,44,0	1/1:13,0:13:19.98:289,20,0	1/1:1,11:12:15.05:217,15,0	0/0:21,0:21:51.87:0,52,580	1/1:2,15:17:8.95:109,9,0	1/1:2,16:18:8.81:112,9,0	1/1:2,30:32:17.82:238,18,0	1/1:6,17:23:11.74:173,12,0	1/1:1,16:17:5.76:69,6,0	1/1:2,22:23:30.09:418,30,0	1/1:19,0:19:50.51:408,51,0	1/1:1,11:12:3.01:44,3,0	1/1:29,2:29:31.94:316,32,0	0/0:18,0:18:28.11:0,28,303	1/1:2,11:13:2.97:43,3,0	1/1:2,25:27:8.72:106,9,0	0/0:18,0:16:36.48:0,36,356	1/1:1,15:16:41.90:418,42,0	1/1:3,16:19:8.44:113,8,0	1/1:3,8:11:8.91:86,9,0
chr10	13600733	.	T	TA	12488.05	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=5.514;DP=597;FS=6.329;HRun=6;HaplotypeScore=115.3143;InbreedingCoeff=0.9680;MQ=75.95;MQ0=0;MQRankSum=-3.216;QD=28.97;ReadPosRankSum=-0.376;VQSLOD=3.8252;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:69.14:0,69,697	1/1:0,6:6:18.06:218,18,0	0/0:19,0:18:37.71:0,38,351	0/0:17,0:17:13.94:0,14,240	1/1:3,34:37:96.15:1108,96,0	0/0:23,0:23:60.47:0,60,318	0/0:21,0:21:4.26:0,4,169	1/1:3,25:28:75.21:894,75,0	1/1:2,15:17:45.14:544,45,0	1/1:2,21:23:60.17:714,60,0	1/1:3,17:20:50.66:587,51,0	0/0:20,0:20:57.11:0,57,574	1/1:3,15:19:24.11:410,24,0	1/1:4,11:15:33.01:429,33,0	1/1:3,16:19:42.13:509,42,0	1/1:3,8:11:15.05:182,15,0	1/1:7,24:31:60.18:727,60,0	1/1:3,15:18:39.12:472,39,0	1/1:5,31:36:78.07:1022,78,0	1/1:3,24:27:72.17:851,72,0	1/1:3,13:16:39.12:473,39,0	0/0:15,0:15:45.10:0,45,459	1/1:1,18:19:48.15:582,48,0	1/1:3,19:21:45.19:676,45,0	0/0:23,0:23:66.13:0,66,666	1/1:6,19:25:63.17:744,63,0	1/1:2,23:25:60.19:728,60,0	1/1:0,17:17:51.16:618,51,0
chr10	13601518	.	G	GTCT	27947.01	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=5.857;DP=583;FS=1.663;HRun=0;HaplotypeScore=117.8263;InbreedingCoeff=0.9986;MQ=75.93;MQ0=0;MQRankSum=-11.674;QD=62.80;ReadPosRankSum=-0.424;VQSLOD=5.7838;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,99,1742	1/1:2,9:11:27.06:588,27,0	0/0:19,0:19:54.18:0,54,932	0/0:16,0:16:45.15:0,45,783	1/1:4,24:28:75.07:1477,75,0	1/1:5,21:25:75.21:1648,75,0	1/1:1,13:14:42.14:957,42,0	1/1:2,23:26:72.25:1668,72,0	1/1:0,16:16:48.16:1134,48,0	1/1:6,19:25:75.26:1736,75,0	1/1:4,18:22:57.20:1329,57,0	0/0:20,0:20:60.19:0,60,996	1/1:3,21:24:69.24:1572,69,0	1/1:2,9:11:30.10:643,30,0	1/1:2,22:24:66.23:1540,66,0	1/1:2,8:10:30.10:685,30,0	1/1:5,19:24:63.17:1435,63,0	1/1:3,13:16:46.67:999,47,0	1/1:9,17:26:72.25:1659,72,0	1/1:3,25:28:81.23:1843,81,0	1/1:4,14:18:39.13:871,39,0	0/0:29,0:29:84.29:0,84,1477	1/1:3,17:21:57.14:1228,57,0	1/1:2,10:12:30.57:672,31,0	0/0:19,0:19:57.20:0,57,1005	1/1:2,35:37:99:2537,108,0	1/1:2,17:19:54.17:1229,54,0	1/1:0,7:7:21.07:497,21,0
chr10	13601558	.	TA	T	15482.58	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=11.952;DP=508;FS=12.305;HRun=1;HaplotypeScore=97.7119;InbreedingCoeff=0.9900;MQ=63.89;MQ0=0;MQRankSum=-6.075;QD=38.32;ReadPosRankSum=-1.588;VQSLOD=3.3003;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:78.25:0,78,1129	1/1:1,8:9:27.08:359,27,0	0/0:10,0:10:30.07:0,30,413	0/0:8,0:8:20.86:0,21,242	1/1:0,32:32:96.20:1267,96,0	1/1:2,15:17:51.15:674,51,0	1/1:2,11:13:36.09:462,36,0	1/1:2,21:23:69.18:904,69,0	1/1:3,18:21:60.18:800,60,0	1/1:0,17:17:51.17:710,51,0	1/1:1,23:24:69.06:873,69,0	0/0:14,0:14:42.14:0,42,621	1/1:3,20:23:69.21:922,69,0	1/1:0,12:12:36.09:473,36,0	1/1:1,29:30:87.28:1192,87,0	1/1:0,14:14:39.13:540,39,0	1/1:2,22:24:69.20:919,69,0	1/1:0,16:16:45.15:625,45,0	1/1:1,20:21:63.19:829,63,0	1/1:0,24:24:72.16:959,72,0	1/1:3,5:8:17.97:192,18,0	0/0:24,0:24:69.22:0,69,1014	1/1:0,14:14:42.07:560,42,0	1/1:1,8:9:21.02:268,21,0	0/0:22,0:22:66.22:0,66,979	1/1:3,23:26:75.23:994,75,0	1/1:0,22:22:60.11:791,60,0	1/1:0,5:5:12.04:168,12,0
chr10	13602141	.	ACG	A	2242.34	PASS	AB=0.987;AC=34;AF=0.607;AN=56;BaseQRankSum=1.411;DP=841;FS=3.346;HRun=0;HaplotypeScore=326.0033;InbreedingCoeff=-0.3603;MQ=36.94;MQ0=14;MQRankSum=-2.993;QD=3.07;ReadPosRankSum=-0.273;VQSLOD=1.9869;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:40,1:41:52.73:53,0,163	0/1:16,0:16:2.50:83,0,2	0/1:50,0:12:29.64:30,0,169	0/0:74,2:22:36.20:0,36,352	0/0:34,0:34:1.97:0,2,8	1/1:22,8:29:22.28:267,22,0	1/1:28,12:40:32.10:345,32,0	0/1:11,0:10:46.79:47,0,73	0/1:17,1:18:38.84:39,0,58	0/1:43,0:42:99:124,0,471	1/1:27,0:27:0.34:21,0,0	0/1:54,1:55:99:147,0,189	0/1:31,0:31:80.22:80,0,81	0/1:16,0:16:10.67:11,0,39	1/1:35,1:36:17.03:181,17,0	0/1:25,0:25:11.87:134,0,12	1/1:21,2:23:44.10:276,44,0	0/1:19,0:19:34.60:96,0,35	0/1:21,0:21:40.24:40,0,141	0/1:27,0:27:1.65:69,0,2	1/1:38,2:38:2.69:16,3,0	0/1:24,3:27:9.07:9,0,171	0/1:37,0:37:0.15:31,0,0	1/1:23,0:23:1.67:26,2,0	0/1:25,1:26:14.43:14,0,162	0/1:29,0:28:84.23:84,0,238	1/1:11,0:11:17.57:124,18,0	0/1:9,0:9:24.02:49,0,24
chr10	13602142	.	CGCACAT	C	5055.52	PASS	AB=0.905;AC=33;AF=0.589;AN=56;BaseQRankSum=1.583;DP=840;FS=1.378;HRun=0;HaplotypeScore=343.9921;InbreedingCoeff=-0.5244;MQ=37.08;MQ0=14;MQRankSum=-3.434;QD=6.97;ReadPosRankSum=-2.687;VQSLOD=2.3020;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:2.95:0,3,928	0/1:14,2:16:64.16:162,0,64	0/1:50,0:13:17.86:18,0,385	0/0:73,0:22:50.52:0,51,890	1/1:31,3:34:4.74:31,5,0	0/1:30,0:29:97.95:98,0,111	0/1:40,0:40:86.63:87,0,181	0/1:12,1:12:99:134,0,285	0/1:16,1:17:99:169,0,144	0/1:36,6:41:99:572,0,1373	1/1:26,1:27:5.70:53,6,0	0/1:54,0:54:22.44:22,0,999	0/1:27,4:31:99:205,0,189	0/1:11,4:16:55.10:74,0,55	0/1:26,9:35:38.05:470,0,38	0/1:14,11:25:47.97:482,0,48	1/1:17,6:23:33.11:774,33,0	0/1:16,3:19:48.01:342,0,48	0/1:17,1:20:99:191,0,260	0/1:26,3:29:14.98:152,0,15	1/1:37,3:38:3.81:49,4,0	0/1:25,0:25:15.81:16,0,355	1/1:35,2:37:5.02:63,5,0	1/1:20,2:22:1.93:50,2,0	0/1:28,0:28:14.04:14,0,518	0/1:26,3:28:99:435,0,637	1/1:8,2:11:1.73:243,2,0	0/1:8,1:10:99:150,0,99
chr10	13602145	.	A	ACG	196.61	PASS	AB=0.961;AC=7;AF=0.125;AN=56;BaseQRankSum=3.128;DP=841;FS=8.540;HRun=0;HaplotypeScore=356.4043;InbreedingCoeff=0.0655;MQ=39.19;MQ0=11;MQRankSum=-1.763;QD=1.06;ReadPosRankSum=-1.366;VQSLOD=0.7344;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:63.13:0,63,786	0/0:16,0:16:9.04:0,9,73	0/0:53,0:16:39.08:0,39,462	0/0:74,0:25:46.61:0,47,654	0/0:35,0:35:2.72:0,3,9	0/0:30,0:29:40.58:0,41,253	0/0:40,0:40:27.16:0,27,240	0/0:12,0:11:25.40:0,25,276	0/0:18,1:19:11.36:0,11,173	0/0:43,0:42:98.28:0,98,1167	0/0:26,0:26:3.53:0,4,10	0/0:54,0:54:48.46:0,48,709	0/0:31,0:31:30.57:0,31,314	0/0:17,0:17:7.01:0,7,62	0/1:33,3:36:55.28:95,0,55	0/1:24,1:25:50.70:51,0,130	0/1:21,2:23:63.94:70,0,64	0/0:18,0:18:17.77:0,18,196	0/0:22,0:22:42.20:0,42,432	0/1:29,0:29:41.57:42,0,80	1/1:38,0:37:2.03:56,2,0	0/0:25,0:25:14.98:0,15,228	0/1:35,0:35:2.30:2,0,21	0/0:20,0:20:2.57:0,3,12	0/0:29,0:29:32.76:0,33,371	0/0:30,0:29:18.79:0,19,544	0/0:9,0:9:12.90:0,13,91	0/0:9,0:9:12.86:0,13,92
chr10	13602146	.	CAT	C	1126.20	PASS	AB=0.995;AC=24;AF=0.429;AN=56;BaseQRankSum=7.011;DP=837;FS=1.458;HRun=0;HaplotypeScore=341.8194;InbreedingCoeff=-0.1868;MQ=40.31;MQ0=11;MQRankSum=-3.368;QD=2.26;ReadPosRankSum=1.139;VQSLOD=1.6611;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:64.75:0,65,984	0/1:14,1:16:45.90:46,0,47	0/0:53,0:17:28.98:0,29,567	0/0:74,0:28:26.63:0,27,877	0/0:35,0:35:2.58:0,3,8	1/1:29,0:29:10.32:59,10,0	1/1:39,0:39:3.44:51,3,0	0/1:12,0:11:15.79:16,0,295	0/1:19,0:19:37.63:38,0,147	0/1:44,0:43:93.11:93,0,1114	0/0:25,1:26:0.01:0,0,3	0/0:55,0:55:32.28:0,32,864	0/1:30,0:30:48.98:49,0,231	0/1:17,0:17:9.72:10,0,80	0/1:35,1:36:18.06:151,0,18	0/1:25,0:25:44.96:136,0,45	1/1:23,0:23:40.54:234,41,0	0/1:18,0:18:68.62:113,0,69	0/1:22,0:22:21.94:22,0,364	0/1:29,0:29:52.50:54,0,52	1/1:36,1:36:2.60:14,3,0	0/0:24,0:24:14.63:0,15,242	0/1:35,0:35:1.25:14,0,1	0/1:20,0:20:1.30:7,0,1	0/0:28,0:28:18.99:0,19,462	0/1:29,0:28:89.33:89,0,467	0/1:9,0:9:25.17:59,0,25	0/1:9,0:9:33.97:34,0,58
chr10	13602152	.	CACG	C	1053.56	PASS	AB=0.986;AC=20;AF=0.357;AN=56;BaseQRankSum=10.883;DP=787;FS=16.250;HRun=0;HaplotypeScore=347.8930;InbreedingCoeff=-0.3355;MQ=42.08;MQ0=8;MQRankSum=-5.257;QD=2.45;ReadPosRankSum=0.239;VQSLOD=0.5628;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:65.72:0,66,1457	0/1:13,0:13:24.82:25,0,70	0/0:49,0:19:49.71:0,50,1064	0/0:66,0:30:76.60:0,77,1581	0/1:37,0:37:0.20:0,0,1	0/1:27,2:28:58.23:58,0,242	0/0:40,0:40:2.83:0,3,391	0/0:13,0:12:30.08:0,30,568	0/1:18,0:18:50.29:50,0,254	0/0:39,0:38:4:0,4,1734	0/1:25,0:25:0.54:1,0,1	0/0:56,0:56:48.65:0,49,1358	0/1:26,0:26:99:142,0,342	0/1:17,0:17:54.36:79,0,54	0/1:34,0:34:99:114,0,133	0/1:23,0:23:99:122,0,136	0/1:20,1:21:85.65:86,0,127	0/1:16,1:18:70.54:71,0,147	0/1:19,0:19:81.93:82,0,510	0/1:24,0:24:25.30:25,0,96	1/1:30,0:29:0.24:1,0,0	0/0:24,0:24:14.22:0,14,368	0/1:28,1:29:13.38:13,0,19	0/1:19,0:19:1.10:13,0,1	0/0:29,0:29:36.13:0,36,831	0/1:26,0:25:99:217,0,779	0/1:14,0:14:12.29:12,0,179	0/1:8,0:8:89.42:89,0,119
chr10	13602157	.	ATAT	A	1019.65	PASS	AB=0.868;AC=20;AF=0.357;AN=56;BaseQRankSum=10.710;DP=769;FS=0.468;HRun=0;HaplotypeScore=347.0310;InbreedingCoeff=-0.4110;MQ=42.66;MQ0=6;MQRankSum=-6.371;QD=2.33;ReadPosRankSum=0.408;VQSLOD=1.3502;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:62.67:0,63,1442	0/1:12,1:13:20.43:20,0,72	0/0:41,1:20:0.87:0,1,1119	0/0:64,1:33:69.64:0,70,1857	0/1:34,3:37:0.14:0,0,1	0/1:20,6:27:21.60:22,0,281	0/1:32,0:36:27.94:28,0,257	0/0:16,0:15:35.82:0,36,693	0/1:16,2:19:58.29:58,0,330	0/0:33,2:35:0.28:0,0,1804	0/0:21,3:25:0.87:0,1,6	0/0:55,0:55:48.46:0,48,1294	0/1:20,5:26:99:101,0,420	0/1:18,0:18:63.52:64,0,65	0/1:27,7:35:99:99,0,230	0/1:16,2:21:99:133,0,170	0/1:19,0:20:61.73:62,0,167	0/1:18,1:19:99:104,0,152	0/1:13,3:17:83.08:83,0,484	0/1:21,2:23:25.14:25,0,104	1/1:25,0:26:1.13:2,1,0	0/0:24,0:24:13.97:0,14,366	0/1:26,3:29:13.38:13,0,19	0/1:17,2:20:1.10:13,0,1	0/0:31,0:31:32.95:0,33,798	0/1:19,8:27:99:233,0,859	0/1:14,1:15:23.04:23,0,309	0/1:4,2:7:81.79:82,0,132
chr10	13602164	.	C	CCACA	12721.12	PASS	AB=0.662;AC=42;AF=0.750;AN=56;BaseQRankSum=8.315;DP=849;FS=7.568;HRun=0;HaplotypeScore=420.4302;InbreedingCoeff=0.5007;MQ=45.54;MQ0=5;MQRankSum=-10.332;QD=18.85;ReadPosRankSum=0.455;VQSLOD=3.7266;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:43:15.72:0,16,773	1/1:4,7:13:25.12:411,25,0	0/0:39,0:24:52.20:0,52,825	0/0:60,0:38:75.71:0,76,1383	0/1:7,26:40:0.61:1,0,3	1/1:15,2:27:40.87:435,41,0	1/1:23,0:33:20.16:198,20,0	1/1:12,6:18:32.97:709,33,0	1/1:12,8:25:46.45:911,46,0	1/1:36,18:57:89.34:2575,89,0	0/1:12,12:28:0.18:15,0,0	0/1:33,0:53:99:321,0,347	1/1:8,10:29:39.45:733,39,0	1/1:9,6:20:23.52:474,24,0	1/1:12,13:38:52.76:926,53,0	1/1:12,4:23:36.93:603,37,0	1/1:12,2:22:24.04:414,24,0	0/1:9,1:21:22.85:356,0,23	1/1:15,6:27:44.62:778,45,0	1/1:14,8:27:5.72:144,6,0	1/1:18,4:32:2.48:85,2,0	0/1:22,0:28:6.43:6,0,273	0/1:11,15:32:7.22:77,0,7	1/1:6,4:22:13.63:76,14,0	0/0:20,0:32:11.53:0,12,423	1/1:10,9:30:68.38:1442,68,0	1/1:9,6:16:31.52:525,32,0	1/1:2,6:11:26.88:506,27,0
chr10	13602188	.	GACACACACACACACACAC	G	4417.99	PASS	AB=0.947;AC=25;AF=0.446;AN=56;BaseQRankSum=5.078;DP=812;FS=15.589;HRun=0;HaplotypeScore=475.4918;InbreedingCoeff=-0.1075;MQ=42.79;MQ0=14;MQRankSum=-5.705;QD=8.11;ReadPosRankSum=-6.349;VQSLOD=0.8662;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:24.35:0,24,3877	0/1:17,1:18:30.93:233,0,31	0/0:33,0:17:2.91:0,3,17	0/0:43,0:23:12.04:0,12,367	1/1:38,0:37:10.67:33,11,0	0/1:22,0:23:99:282,0,240	0/0:29,0:30:16.89:0,17,626	0/1:42,0:38:99:105,0,2135	0/1:22,1:23:99:415,0,104	0/1:67,1:65:99:138,0,3133	0/1:22,1:23:23.07:26,0,23	0/0:44,0:45:39.09:0,39,3510	0/1:29,1:29:99:358,0,329	0/1:14,2:16:5.38:5,0,20	0/1:34,2:36:21.94:455,0,22	1/1:18,3:21:17.93:529,18,0	0/1:16,2:18:99:176,0,129	0/1:18,2:20:99:298,0,852	0/1:27,1:26:99:192,0,389	0/1:26,1:26:40.46:203,0,40	1/1:26,1:25:9.71:76,10,0	0/1:20,0:20:6.15:6,0,1235	1/1:27,0:27:11.42:71,11,0	0/1:22,2:23:7.18:185,0,7	0/0:28,0:28:33.58:0,34,2734	0/0:30,0:29:9.82:0,10,1371	1/1:11,3:14:12.10:630,12,0	0/0:12,0:12:9.03:0,9,454
chr10	13602219	.	A	ATG	820.78	PASS	AB=0.870;AC=8;AF=0.143;AN=56;BaseQRankSum=3.475;DP=700;FS=69.456;HRun=0;HaplotypeScore=239.6135;InbreedingCoeff=-0.1565;MQ=39.49;MQ0=26;MQRankSum=-6.135;QD=3.31;ReadPosRankSum=2.780;VQSLOD=0.3481;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:74.82:0,75,1040	0/0:12,2:14:11.88:0,12,110	0/0:31,0:8:21.04:0,21,297	0/0:36,0:20:48.15:0,48,691	0/0:26,1:26:6.47:0,6,92	0/0:26,2:25:28.79:0,29,240	0/1:24,4:27:28.88:29,0,199	0/1:42,6:45:99:273,0,888	0/0:14,6:20:22.09:0,22,147	0/1:53,5:55:99:298,0,864	0/0:23,2:25:3.99:0,4,172	0/0:37,0:37:63.17:0,63,898	0/1:14,8:20:74.65:75,0,236	0/0:10,3:13:1.25:0,1,3	0/1:19,5:25:12.11:12,0,110	0/0:14,3:16:13.31:0,13,80	0/0:12,1:13:26.99:0,27,318	0/1:19,2:20:99:114,0,350	0/1:23,1:22:38.54:39,0,251	0/0:24,3:27:15.47:0,15,177	0/0:17,1:19:11.80:0,12,136	0/0:16,0:16:23.35:0,23,345	0/0:18,3:22:3.47:0,3,27	0/0:12,4:15:14.62:0,15,133	0/0:28,0:28:60.19:0,60,917	0/1:18,2:18:99:114,0,359	0/0:13,1:14:23.75:0,24,211	0/0:6,0:6:12.42:0,12,110
chr10	13602528	.	C	CAA	10335.33	PASS	AB=0.929;AC=45;AF=0.804;AN=56;BaseQRankSum=-3.032;DP=477;FS=7.658;HRun=7;HaplotypeScore=82.2124;InbreedingCoeff=0.8378;MQ=61.13;MQ0=11;MQRankSum=-3.804;QD=27.34;ReadPosRankSum=0.593;VQSLOD=4.1469;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:19:40.97:0,41,475	1/1:0,2:1:3.01:49,3,0	0/0:29,0:14:39.02:0,39,427	0/1:24,1:10:9.97:10,0,133	1/1:5,7:12:27.05:406,27,0	1/1:7,4:11:18.04:259,18,0	1/1:1,10:11:24.05:366,24,0	1/1:6,22:27:57.18:903,57,0	1/1:5,11:16:29.83:422,30,0	1/1:9,8:17:34.77:471,35,0	1/1:7,4:11:12.92:175,13,0	0/0:17,0:17:17.81:0,18,222	1/1:6,10:16:28.46:355,28,0	1/1:7,13:20:45.72:672,46,0	1/1:6,10:16:42.86:548,43,0	1/1:9,7:15:35.78:464,36,0	1/1:14,12:24:53.68:795,54,0	1/1:7,9:16:37.33:532,37,0	1/1:8,13:21:42.55:658,43,0	1/1:5,5:10:21.04:302,21,0	1/1:4,7:11:28.85:395,29,0	0/0:6,0:6:9:0,9,104	1/1:5,4:9:23.49:297,23,0	1/1:9,3:12:23.91:311,24,0	0/0:26,0:26:27.07:0,27,393	1/1:15,20:35:64.93:917,65,0	1/1:7,17:24:45.15:735,45,0	1/1:7,5:11:20.57:292,21,0
chr10	13602599	.	G	GA	6556.93	PASS	AB=0.742;AC=38;AF=0.679;AN=56;BaseQRankSum=-4.378;DP=519;FS=2.979;HRun=12;HaplotypeScore=73.4595;InbreedingCoeff=0.7628;MQ=66.26;MQ0=2;MQRankSum=-4.197;QD=17.44;ReadPosRankSum=-2.208;VQSLOD=5.2651;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:59.29:0,59,437	1/1:2,7:9:21.03:204,21,0	0/0:15,0:15:17.62:0,18,105	0/1:9,0:6:1.03:4,0,1	1/1:9,14:25:22.10:381,22,0	0/0:3,0:17:24.42:0,24,71	0/0:5,0:17:26.14:0,26,81	1/1:10,19:29:48.02:441,48,0	0/1:6,6:12:0.41:155,0,0	0/1:7,15:22:1.76:308,0,2	1/1:4,10:15:32.89:306,33,0	0/0:18,0:19:52.72:0,53,378	1/1:11,8:20:47.77:416,48,0	1/1:8,16:25:31.75:483,32,0	1/1:4,6:11:20.18:219,20,0	1/1:3,13:15:14.14:295,14,0	1/1:6,14:20:47.11:459,47,0	1/1:6,16:22:11.09:424,11,0	0/1:10,7:17:32.88:177,0,33	1/1:3,15:18:44.86:413,45,0	1/1:1,6:7:14.98:136,15,0	0/0:19,0:20:40.73:0,41,288	1/1:2,13:17:38.73:349,39,0	1/1:1,13:14:39.05:375,39,0	0/0:24,0:25:63.48:0,63,449	1/1:14,17:32:19.21:492,19,0	1/1:14,8:22:16.13:326,16,0	1/1:3,8:10:21.46:196,21,0
chr10	13602933	.	G	GAC	36.35	PASS	AB=0.871;AC=4;AF=0.071;AN=56;BaseQRankSum=2.905;DP=641;FS=1.280;HRun=0;HaplotypeScore=193.3762;InbreedingCoeff=0.3024;MQ=36.40;MQ0=46;MQRankSum=-3.245;QD=1.07;ReadPosRankSum=-2.045;VQSLOD=2.5842;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,105,1463	0/1:3,1:4:0:0,0,0	0/0:56,0:6:1.08:0,1,117	0/0:74,0:6:8.39:0,8,136	0/0:15,0:11:0:0,0,1	0/0:22,0:19:8.22:0,8,49	0/0:20,0:17:8:0,8,40	1/1:14,0:9:5.70:50,6,0	0/0:14,0:14:12.55:0,13,81	0/0:21,0:18:7.92:0,8,183	0/0:17,1:17:5.65:0,6,49	0/0:39,0:38:96.08:0,96,1254	0/0:18,1:19:23.06:0,23,148	0/0:13,0:13:9.66:0,10,61	0/0:21,0:20:6.39:0,6,42	0/0:21,1:21:15.85:0,16,120	0/0:32,0:32:15.52:0,16,298	0/0:8,0:8:17.66:0,18,113	0/1:15,1:10:74.79:78,0,75	0/0:16,0:13:6.84:0,7,46	0/0:18,0:16:2.49:0,2,9	0/0:19,0:19:48.14:0,48,685	0/0:15,0:15:5.94:0,6,42	0/0:33,0:32:4.69:0,5,28	0/0:12,0:11:30.08:0,30,434	0/0:23,0:19:40.52:0,41,288	0/0:16,0:14:18.02:0,18,122	0/0:9,0:7:11.40:0,11,65
chr10	13602944	.	A	AGG	730.23	PASS	AB=0.941;AC=23;AF=0.411;AN=56;BaseQRankSum=9.992;DP=505;FS=0.617;HRun=1;HaplotypeScore=171.5340;InbreedingCoeff=0.3729;MQ=42.25;MQ0=29;MQRankSum=-9.293;QD=4.65;ReadPosRankSum=2.810;VQSLOD=-0.3928;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,105,1561	0/0:3,0:3:3.78:0,4,20	0/0:61,0:13:25.35:0,25,416	0/0:71,0:11:26.52:0,27,315	0/0:9,0:7:0:0,0,1	1/1:2,13:12:19.27:156,19,0	1/1:3,13:14:10.46:68,10,0	0/0:8,0:6:2.21:0,2,18	1/1:7,0:7:2.84:9,3,0	1/1:13,1:13:12.31:138,12,0	0/0:12,0:12:2.36:0,2,16	0/0:37,0:36:90.31:0,90,1375	0/1:9,1:10:1.53:8,0,2	0/1:9,1:10:6.53:7,0,39	0/0:12,1:12:2.04:0,2,6	1/1:15,0:14:3.25:89,3,0	0/1:21,0:24:50.97:188,0,51	0/1:5,0:5:12.34:44,0,12	1/1:6,1:4:11.79:74,12,0	0/0:15,0:12:3.85:0,4,48	0/0:11,0:11:5.08:0,5,17	0/0:22,0:22:56.90:0,57,867	1/1:10,0:10:2.22:7,2,0	0/0:26,0:25:0.33:0,0,2	0/0:14,0:13:39.13:0,39,593	1/1:10,0:9:3.24:42,3,0	0/1:7,1:7:9.50:36,0,10	1/1:6,0:5:2.09:30,2,0
chr10	13602949	.	GAC	G	1910.31	PASS	AB=0.619;AC=37;AF=0.661;AN=56;BaseQRankSum=12.116;DP=495;FS=1.674;HRun=0;HaplotypeScore=167.1127;InbreedingCoeff=0.5086;MQ=44.95;MQ0=19;MQRankSum=-10.265;QD=7.58;ReadPosRankSum=1.291;VQSLOD=3.6479;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:93.79:0,94,1750	0/1:0,2:2:16.53:25,0,17	0/0:53,0:16:40.38:0,40,590	0/0:63,0:15:21.54:0,22,500	0/0:3,6:8:6.36:0,6,17	1/1:5,12:14:13.71:65,14,0	1/1:15,9:22:0.13:16,0,0	1/1:3,5:6:11.77:112,12,0	1/1:3,3:6:7.64:44,8,0	1/1:3,10:12:17.67:280,18,0	0/1:2,9:11:0.75:3,0,1	0/0:36,0:36:96.33:0,96,1718	1/1:3,6:9:6.52:82,7,0	0/1:4,8:12:44.81:45,0,52	1/1:4,8:11:4.11:23,4,0	1/1:2,12:14:22.85:210,23,0	1/1:9,12:22:49.39:376,49,0	1/1:2,3:5:9.11:114,9,0	1/1:2,6:5:12.03:135,12,0	1/1:7,10:14:0.43:69,0,0	0/1:8,5:12:4.77:10,0,5	0/0:23,0:23:60.20:0,60,1081	1/1:2,8:10:6.72:41,7,0	0/1:16,9:25:1.51:2,0,9	0/0:15,0:14:42.08:0,42,739	1/1:1,10:10:29.48:269,29,0	1/1:2,6:7:0.25:95,0,0	1/1:0,3:3:8.39:75,8,0
chr10	13602952	.	A	AGG	2724.04	PASS	AB=1.000;AC=38;AF=0.679;AN=56;BaseQRankSum=11.993;DP=482;FS=3.856;HRun=1;HaplotypeScore=168.4651;InbreedingCoeff=0.6032;MQ=47.43;MQ0=15;MQRankSum=-11.552;QD=11.40;ReadPosRankSum=-1.055;VQSLOD=0.0700;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:96.29:0,96,1430	0/1:2,0:2:12.13:26,0,12	0/0:49,0:17:34.32:0,34,588	0/0:55,0:16:41.88:0,42,544	1/1:10,0:9:1.45:5,1,0	0/1:22,0:19:13.53:75,0,14	0/0:22,0:20:8.90:0,9,49	1/1:6,1:6:12.03:132,12,0	1/1:5,1:6:11.75:92,12,0	1/1:12,0:11:30.07:328,30,0	1/1:10,1:11:7.55:32,8,0	0/0:35,0:35:96.33:0,96,1470	1/1:8,0:8:14.37:115,14,0	0/1:12,0:12:32.83:70,0,33	1/1:11,1:11:16.20:97,16,0	1/1:15,0:14:32.97:298,33,0	1/1:22,0:22:45.98:500,46,0	1/1:5,0:5:12.04:142,12,0	1/1:8,0:5:12.03:138,12,0	1/1:17,0:14:19.40:197,19,0	0/1:12,0:11:0.82:38,0,1	0/0:24,0:24:59.91:0,60,917	1/1:10,0:10:14.31:85,14,0	1/1:25,1:25:1.50:25,2,0	0/0:16,0:15:42.14:0,42,639	1/1:11,0:10:29.91:307,30,0	1/1:8,0:7:12:112,12,0	1/1:3,0:3:9.03:103,9,0
chr10	13602953	.	GAC	G	1865.41	PASS	AB=0.985;AC=39;AF=0.696;AN=56;BaseQRankSum=13.185;DP=481;FS=3.620;HRun=0;HaplotypeScore=170.3560;InbreedingCoeff=0.6054;MQ=47.93;MQ0=15;MQRankSum=-11.397;QD=7.12;ReadPosRankSum=-0.577;VQSLOD=3.0495;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:90.78:0,91,1708	0/1:2,0:2:13.74:14,0,22	0/0:48,0:17:43.12:0,43,613	0/0:55,0:17:19.63:0,20,587	0/1:10,0:9:1.31:1,0,6	1/1:18,4:19:29.81:186,30,0	1/1:12,10:20:16.39:101,16,0	1/1:7,0:6:11.90:84,12,0	1/1:6,0:6:10.44:50,10,0	1/1:12,0:11:29.33:205,29,0	1/1:11,0:11:6.49:28,6,0	0/0:35,0:35:96.33:0,96,1715	1/1:9,0:9:6.31:71,6,0	0/1:11,1:12:38.86:39,0,46	1/1:12,0:11:10.52:45,11,0	1/1:15,0:14:33.40:178,33,0	1/1:22,0:22:58.13:332,58,0	1/1:5,0:5:14.93:113,15,0	1/1:8,0:5:11.95:91,12,0	1/1:16,0:13:11.33:108,11,0	0/1:12,0:11:1.27:26,0,1	0/0:23,0:23:60.20:0,60,1084	1/1:10,0:10:12.57:49,13,0	0/1:26,0:25:7.45:7,0,8	0/0:16,0:15:45.09:0,45,782	1/1:12,0:11:31.33:203,31,0	1/1:8,0:7:11.43:61,11,0	1/1:3,0:3:8.93:64,9,0
chr10	13602956	.	A	AGG	2918.86	PASS	AB=0.883;AC=38;AF=0.679;AN=56;BaseQRankSum=11.774;DP=486;FS=7.341;HRun=1;HaplotypeScore=176.3859;InbreedingCoeff=0.6501;MQ=51.67;MQ0=13;MQRankSum=-9.902;QD=11.63;ReadPosRankSum=-1.947;VQSLOD=-0.5568;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,99,1491	0/1:2,0:2:33.61:34,0,35	0/0:41,0:17:43.56:0,44,603	0/0:51,0:22:53.11:0,53,739	1/1:8,3:10:4.07:18,4,0	0/1:22,0:19:2.45:2,0,16	0/0:23,1:23:9.22:0,9,45	1/1:6,1:6:12.01:143,12,0	1/1:5,2:7:13.74:111,14,0	1/1:13,1:13:32.45:306,32,0	1/1:10,1:11:8.69:54,9,0	0/0:36,0:36:99:0,99,1495	1/1:8,2:10:15.80:177,16,0	0/1:11,2:13:30.35:67,0,30	1/1:11,2:13:20.16:194,20,0	1/1:13,2:14:32.34:279,32,0	1/1:16,6:22:37.92:459,38,0	1/1:5,1:6:17.03:146,17,0	1/1:7,1:5:11.98:113,12,0	1/1:11,5:13:21.15:216,21,0	0/1:6,6:11:1.59:56,0,2	0/0:22,0:22:59.91:0,60,919	1/1:8,2:10:14.67:90,15,0	1/1:12,14:26:4.52:83,5,0	0/0:17,0:16:48.15:0,48,709	1/1:13,1:13:34.48:337,34,0	1/1:7,1:8:14.74:121,15,0	1/1:3,0:3:9.01:109,9,0
chr10	13602957	.	GAC	G	4518.72	PASS	AB=0.629;AC=40;AF=0.714;AN=56;BaseQRankSum=13.330;DP=482;FS=0.974;HRun=0;HaplotypeScore=169.0581;InbreedingCoeff=0.6325;MQ=52.09;MQ0=13;MQRankSum=-10.254;QD=16.49;ReadPosRankSum=-1.419;VQSLOD=4.7752;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:96.80:0,97,1794	0/1:0,2:2:21.10:25,0,21	0/0:41,0:18:46.54:0,47,645	0/0:50,1:22:38.53:0,39,796	1/1:6,6:11:1.02:89,1,0	1/1:10,12:19:33.59:347,34,0	1/1:15,9:23:30.08:211,30,0	1/1:2,6:7:15.01:149,15,0	1/1:3,4:7:14.99:161,15,0	1/1:4,10:13:35.99:388,36,0	1/1:1,10:11:11.91:126,12,0	0/0:35,0:35:99:0,99,1760	1/1:4,6:10:13.42:175,13,0	0/1:5,8:13:42.24:156,0,42	1/1:4,9:13:23.94:274,24,0	1/1:3,13:15:41.98:407,42,0	1/1:6,13:19:53.62:456,54,0	1/1:3,3:6:17.99:177,18,0	1/1:2,5:5:12.03:138,12,0	1/1:6,10:13:19.83:217,20,0	0/1:6,5:10:2.34:111,0,2	0/0:22,0:22:60.20:0,60,1084	1/1:3,8:11:20.88:221,21,0	0/1:16,11:26:5.19:53,0,5	0/0:17,0:16:48.10:0,48,826	1/1:4,10:13:38.99:389,39,0	1/1:2,6:8:14.71:155,15,0	1/1:0,3:3:9.01:93,9,0
chr10	13602960	.	A	AGG	8226.66	PASS	AB=0.938;AC=42;AF=0.750;AN=56;BaseQRankSum=14.227;DP=524;FS=3.267;HRun=1;HaplotypeScore=181.3995;InbreedingCoeff=0.7650;MQ=51.39;MQ0=12;MQRankSum=-11.840;QD=25.47;ReadPosRankSum=-4.261;VQSLOD=2.2847;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,99,1495	0/1:2,0:2:18.33:36,0,18	0/0:38,0:19:48.14:0,48,691	0/0:46,0:21:45.71:0,46,794	1/1:12,3:13:8.44:165,8,0	1/1:20,4:21:38.99:603,39,0	1/1:10,14:25:36.07:434,36,0	1/1:15,1:15:39.11:561,39,0	1/1:6,2:8:18.06:294,18,0	1/1:18,1:18:54.15:783,54,0	1/1:11,1:12:14.88:174,15,0	0/0:36,0:36:99:0,102,1540	1/1:8,4:12:26.90:355,27,0	0/1:12,2:14:22.85:267,0,23	1/1:15,4:19:38.80:660,39,0	1/1:15,2:16:42.10:552,42,0	1/1:15,6:21:60.16:731,60,0	1/1:4,2:6:17.54:221,18,0	1/1:8,1:7:18.06:236,18,0	1/1:12,5:14:25.46:355,25,0	1/1:9,6:14:9.03:157,9,0	0/0:23,0:23:59.91:0,60,919	1/1:9,2:11:27:360,27,0	1/1:13,15:27:7.53:162,8,0	0/0:17,0:16:48.16:0,48,731	1/1:16,3:18:51.12:716,51,0	1/1:7,2:9:18.05:227,18,0	1/1:4,0:4:12.04:179,12,0
chr10	13603057	.	TTAGAA	T	21176.29	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=13.750;DP=618;FS=8.806;HRun=0;HaplotypeScore=136.7900;InbreedingCoeff=0.9914;MQ=70.65;MQ0=0;MQRankSum=-8.992;QD=45.74;ReadPosRankSum=0.829;VQSLOD=4.9297;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,144,4219	1/1:1,6:7:18.03:325,18,0	0/0:19,0:19:45.14:0,45,1171	0/0:19,0:19:44.89:0,45,1190	1/1:2,14:16:33.08:616,33,0	1/1:2,25:27:63.22:1279,63,0	1/1:4,16:20:42.14:847,42,0	1/1:4,18:22:54.14:967,54,0	1/1:3,16:19:45.15:909,45,0	1/1:3,26:29:69.24:1390,69,0	1/1:4,19:23:47.29:962,47,0	0/0:35,0:35:99:0,99,2914	1/1:1,22:23:59.94:1203,60,0	1/1:2,15:17:45.11:873,45,0	1/1:4,20:24:57.20:1157,57,0	1/1:5,29:34:75.26:1522,75,0	1/1:5,29:34:66.23:1340,66,0	1/1:0,9:9:24.08:487,24,0	1/1:3,15:18:45.03:809,45,0	1/1:2,22:24:66.18:1273,66,0	1/1:0,21:21:45.15:913,45,0	0/0:17,0:17:42.14:0,42,1273	1/1:0,9:9:27.09:542,27,0	1/1:2,31:33:63.22:1258,63,0	0/0:12,0:12:36.11:0,36,974	1/1:3,22:25:66.13:1223,66,0	1/1:2,18:20:51.15:1035,51,0	1/1:1,8:9:12.04:244,12,0
chr10	13603944	.	C	CT	10655.63	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-9.468;DP=360;FS=14.126;HRun=1;HaplotypeScore=38.2838;InbreedingCoeff=0.9975;MQ=75.70;MQ0=0;MQRankSum=-4.274;QD=41.62;ReadPosRankSum=4.164;VQSLOD=3.4764;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:63.20:0,63,817	1/1:1,8:9:24.08:360,24,0	0/0:12,0:12:32.69:0,33,386	0/0:15,0:15:37.27:0,37,481	1/1:1,12:13:39.13:565,39,0	0/0:8,0:8:24.08:0,24,312	0/0:11,0:11:33.09:0,33,414	1/1:0,11:11:33.10:473,33,0	1/1:0,16:16:48.16:720,48,0	1/1:0,12:12:36.12:539,36,0	1/1:1,9:10:27.09:405,27,0	0/0:10,0:10:27.09:0,27,351	1/1:1,14:15:42.14:629,42,0	1/1:1,11:12:30.10:449,30,0	1/1:0,13:13:36.12:540,36,0	1/1:0,16:16:45.15:675,45,0	1/1:0,14:14:39.13:585,39,0	1/1:0,7:7:21.03:290,21,0	1/1:1,12:13:36.10:516,36,0	1/1:1,9:10:27.09:405,27,0	1/1:0,19:19:54.18:810,54,0	0/0:12,0:12:33.11:0,33,428	1/1:1,14:15:36.12:540,36,0	1/1:0,13:13:36.12:540,36,0	0/0:14,0:14:42.09:0,42,510	1/1:1,13:14:39.13:584,39,0	1/1:0,14:14:42.14:629,42,0	1/1:0,10:10:27.09:405,27,0
chr10	13604096	.	AACACACAC	A	1669.78	PASS	AC=16;AF=0.444;AN=36;BaseQRankSum=4.275;DP=130;FS=6.215;HRun=0;HaplotypeScore=44.0067;InbreedingCoeff=0.6982;MQ=59.10;MQ0=2;MQRankSum=-4.793;QD=37.95;ReadPosRankSum=-0.956;VQSLOD=1.7649;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:8:21.07:0,21,800	1/1:0,2:2:6.02:154,6,0	0/0:20,0:11:6.02:0,6,165	0/0:9,0:3:6.02:0,6,185	1/1:2,4:6:12.04:284,12,0	0/0:1,0:12:12.04:0,12,423	0/0:6,0:6:3.01:0,3,114	1/1:9,2:11:5.94:41,6,0	./.	1/1:1,0:1:2.98:22,3,0	1/1:1,7:8:18.06:393,18,0	0/0:11,0:12:27.09:0,27,998	./.	./.	./.	./.	./.	./.	0/0:4,0:4:3:0,3,27	1/1:2,5:8:18.06:420,18,0	./.	0/0:2,0:2:6.02:0,6,250	1/1:1,4:5:12.04:269,12,0	0/0:1,0:1:0.47:0,0,1	0/0:3,0:4:12.04:0,12,438	./.	./.	1/1:0,3:3:9.03:231,9,0
chr10	13604204	.	CCA	C	2351.10	PASS	AB=0.971;AC=41;AF=0.759;AN=54;BaseQRankSum=4.139;DP=214;FS=17.077;HRun=0;HaplotypeScore=41.7351;InbreedingCoeff=0.5874;MQ=85.45;MQ0=1;MQRankSum=-3.945;QD=15.57;ReadPosRankSum=5.005;VQSLOD=1.7850;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:62.58:0,63,681	1/1:0,5:5:9.03:124,9,0	0/1:32,1:19:18.92:19,0,257	0/0:21,0:14:12.39:0,12,122	1/1:0,6:6:11.85:115,12,0	1/1:0,0:13:20.42:116,20,0	1/1:0,0:18:33.68:187,34,0	1/1:1,12:13:35.85:383,36,0	1/1:0,3:3:6.02:82,6,0	1/1:0,4:4:6.02:83,6,0	1/1:0,7:7:18.06:248,18,0	0/0:12,0:12:36:0,36,424	1/1:0,5:5:3.01:41,3,0	1/1:1,0:1:2.92:17,3,0	1/1:0,3:3:3.01:41,3,0	1/1:0,3:3:6.02:82,6,0	1/1:0,6:6:9.03:124,9,0	1/1:2,0:2:5.88:37,6,0	1/1:1,6:7:15.89:186,16,0	1/1:0,4:4:8.94:99,9,0	./.	0/0:4,0:4:8.99:0,9,73	1/1:0,5:5:11.99:143,12,0	0/0:2,0:2:0:0,0,0	0/0:2,0:2:6.01:0,6,62	1/1:0,4:4:8.96:100,9,0	1/1:0,7:7:15.05:206,15,0	1/1:0,2:2:6.02:83,6,0
chr10	13604413	.	A	AAC	15036.50	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=8.456;DP=410;FS=0.500;HRun=0;HaplotypeScore=72.0584;InbreedingCoeff=0.9769;MQ=68.90;MQ0=0;MQRankSum=-0.931;QD=44.22;ReadPosRankSum=-0.801;VQSLOD=6.0577;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:51.12:0,51,684	1/1:0,6:6:18.06:340,18,0	0/0:10,0:9:23.05:0,23,274	0/0:6,0:6:8.09:0,8,148	1/1:1,9:11:29.93:458,30,0	1/1:0,0:18:43.13:224,43,0	1/1:1,0:16:34.50:180,35,0	1/1:0,30:32:96.23:1590,96,0	1/1:0,12:13:33.11:601,33,0	1/1:0,18:19:57.04:984,57,0	1/1:0,18:19:45.15:845,45,0	0/0:20,0:20:57.18:0,57,814	1/1:0,9:10:27.09:509,27,0	1/1:0,10:10:30.10:568,30,0	1/1:0,18:18:51.17:922,51,0	1/1:0,12:12:30.10:567,30,0	1/1:2,23:25:52.33:1126,52,0	1/1:0,14:14:42.14:795,42,0	1/1:0,15:17:44.95:578,45,0	1/1:0,14:14:39.13:735,39,0	1/1:0,6:6:18.06:341,18,0	0/0:9,0:9:27.08:0,27,376	1/1:0,13:13:36.12:670,36,0	1/1:0,10:10:15.05:284,15,0	0/0:8,0:8:21.07:0,21,307	1/1:0,15:15:42.13:743,42,0	1/1:0,23:24:60.07:1068,60,0	1/1:0,18:18:48.16:908,48,0
chr10	13605286	.	GAAAA	G	11669.91	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=12.991;DP=572;FS=0.000;HRun=14;HaplotypeScore=148.3246;InbreedingCoeff=0.9955;MQ=66.57;MQ0=0;MQRankSum=-9.030;QD=30.95;ReadPosRankSum=6.127;VQSLOD=2.5320;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:38:99:0,114,2547	1/1:3,8:11:24.02:340,24,0	0/0:29,0:15:25.89:0,26,397	0/0:13,0:9:16.78:0,17,252	1/1:6,24:30:53.97:764,54,0	0/0:8,0:25:51.17:0,51,1000	0/0:10,0:23:39.13:0,39,772	1/1:6,16:22:45.05:637,45,0	1/1:1,12:13:30.07:424,30,0	1/1:4,24:28:75.18:1047,75,0	1/1:3,17:20:45.05:637,45,0	0/0:24,0:24:66.23:0,66,1541	1/1:2,18:20:48.12:679,48,0	1/1:1,22:23:60.16:849,60,0	1/1:6,11:17:32.97:467,33,0	1/1:2,22:24:66.19:934,66,0	1/1:2,15:17:39.05:552,39,0	1/1:4,17:21:45.02:618,45,0	1/1:7,11:18:33.04:449,33,0	1/1:3,18:21:51.14:722,51,0	1/1:2,15:17:30.02:424,30,0	0/0:17,0:18:51.17:0,51,1144	1/1:5,11:16:27.01:382,27,0	1/1:3,16:20:24.47:345,24,0	0/0:24,0:25:69.19:0,69,1482	1/1:3,12:15:36.05:509,36,0	1/1:1,15:16:45.14:637,45,0	1/1:1,7:8:18.03:255,18,0
chr10	13607252	.	T	TC	3628.10	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=10.774;DP=446;FS=1.935;HRun=1;HaplotypeScore=116.5423;InbreedingCoeff=0.8169;MQ=78.45;MQ0=0;MQRankSum=-0.633;QD=10.77;ReadPosRankSum=1.146;VQSLOD=1.8202;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:84.27:0,84,1089	1/1:8,0:8:14.67:61,15,0	0/0:9,0:9:24.08:0,24,307	0/0:15,0:15:39.05:0,39,437	1/1:8,0:8:7.18:36,7,0	1/1:11,0:11:2.13:64,2,0	1/1:43,0:43:99:674,105,0	1/1:14,0:14:24.85:147,25,0	1/1:7,0:7:16.79:122,17,0	1/1:17,0:17:39.26:226,39,0	1/1:8,0:8:4.58:25,5,0	0/0:34,0:34:99:0,99,1284	1/1:8,0:8:11.44:80,11,0	1/1:14,1:15:32.94:216,33,0	1/1:8,0:8:7.88:47,8,0	1/1:4,0:4:11.19:51,11,0	1/1:26,2:28:30.06:305,30,0	1/1:23,1:24:59.99:328,60,0	1/1:11,3:14:34.58:249,35,0	1/1:2,0:2:0.47:1,0,0	1/1:63,0:63:89.80:444,90,0	0/0:9,0:9:24.08:0,24,309	0/0:3,0:3:2.96:0,3,20	1/1:25,0:25:40.49:206,40,0	0/0:11,0:11:30.10:0,30,384	1/1:18,0:18:29.88:227,30,0	1/1:10,0:9:22.24:118,22,0	1/1:2,0:2:0.20:0,0,0
chr10	13607987	.	T	TA	760.98	PASS	AB=0.980;AC=9;AF=0.161;AN=56;BaseQRankSum=-0.778;DP=591;FS=3.880;HRun=0;HaplotypeScore=156.7877;InbreedingCoeff=0.2488;MQ=80.49;MQ0=2;MQRankSum=-1.002;QD=5.28;ReadPosRankSum=-3.353;VQSLOD=2.8688;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:81.27:0,81,1130	0/0:9,0:9:19.10:0,19,82	0/0:41,0:34:55.07:0,55,788	0/0:34,0:25:47.79:0,48,496	0/1:23,0:23:8.57:9,0,127	1/1:5,17:22:13.81:411,14,0	1/1:3,10:17:35.95:371,36,0	0/0:17,0:17:39.46:0,39,158	0/0:23,0:23:3.88:0,4,143	0/0:26,0:26:49.58:0,50,192	0/0:18,0:18:13.84:0,14,121	0/0:22,0:22:66.20:0,66,887	0/0:16,1:17:4.50:0,5,110	0/0:10,0:10:4.75:0,5,91	0/0:26,0:26:36.05:0,36,184	0/0:21,0:21:4.65:0,5,177	0/0:24,0:24:35.52:0,36,206	0/0:15,0:15:38.71:0,39,174	0/1:21,0:21:28.90:29,0,109	0/0:16,0:16:3.98:0,4,103	0/1:16,2:18:38.57:39,0,96	0/0:22,0:22:66.22:0,66,919	0/1:23,0:23:37.15:37,0,133	0/1:20,0:20:11.60:12,0,145	0/0:15,0:15:45.15:0,45,624	0/0:25,0:25:55.47:0,55,219	0/0:29,0:29:26.99:0,27,271	0/0:9,0:9:24.30:0,24,106
chr10	13608757	.	G	GAAAT	37044.38	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=7.571;DP=775;FS=4.175;HRun=0;HaplotypeScore=140.6008;InbreedingCoeff=1.0000;MQ=83.08;MQ0=0;MQRankSum=-10.386;QD=63.43;ReadPosRankSum=1.738;VQSLOD=6.9550;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:64,0:64:99:0,187,3397	1/1:4,13:17:48.10:1134,48,0	0/0:31,0:31:81.15:0,81,1351	0/0:23,0:23:57.11:0,57,923	1/1:8,35:43:99:2618,105,0	1/1:7,28:35:84.22:2052,84,0	1/1:6,9:17:42.14:1000,42,0	1/1:17,19:37:87.28:2098,87,0	1/1:3,21:24:66.23:1714,66,0	1/1:1,20:22:60.21:1530,60,0	1/1:4,24:28:75.26:1877,75,0	0/0:28,0:28:81.25:0,81,1442	1/1:4,17:22:45.15:1160,45,0	1/1:2,17:19:51.17:1319,51,0	1/1:5,18:24:57.19:1440,57,0	1/1:2,22:25:69.24:1761,69,0	1/1:3,28:32:78.27:2079,78,0	1/1:2,24:26:60.21:1596,60,0	1/1:7,17:24:69.21:1662,69,0	1/1:4,25:31:75.26:1913,75,0	1/1:5,25:31:72.25:1792,72,0	0/0:22,0:22:63.20:0,63,1144	1/1:11,16:27:54.08:1208,54,0	1/1:2,15:17:42.14:1055,42,0	0/0:23,0:23:66.20:0,66,1198	1/1:3,25:28:81.28:2083,81,0	1/1:2,24:26:75.26:1953,75,0	1/1:1,24:28:75.26:1998,75,0
chr10	13609615	.	CACCACA	C	7984.01	PASS	AB=0.926;AC=35;AF=0.625;AN=56;BaseQRankSum=12.210;DP=517;FS=2.988;HRun=0;HaplotypeScore=170.9939;InbreedingCoeff=0.3792;MQ=67.90;MQ0=13;MQRankSum=-11.159;QD=23.48;ReadPosRankSum=3.351;VQSLOD=4.6797;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:69.24:0,69,2267	1/1:8,1:9:20.95:317,21,0	0/0:33,0:15:45.01:0,45,1169	0/0:56,0:24:66.19:0,66,1629	0/0:16,2:17:3.61:0,4,44	1/1:15,3:18:36.56:326,37,0	1/1:22,0:22:23.49:460,23,0	0/1:22,0:20:18.59:409,0,19	1/1:15,2:17:44.44:629,44,0	1/1:21,2:23:3.24:981,3,0	1/1:11,2:13:5.99:61,6,0	0/0:23,0:22:66.20:0,66,2064	1/1:6,1:7:2.07:160,2,0	1/1:10,2:12:7.07:266,7,0	0/1:12,2:14:25.06:309,0,25	1/1:14,1:15:37.95:536,38,0	0/1:19,2:21:13.98:664,0,14	1/1:16,1:17:3.22:577,3,0	1/1:12,1:12:30.08:515,30,0	0/1:11,3:14:37.28:50,0,37	0/1:23,1:24:4.06:139,0,4	0/0:11,0:11:33.11:0,33,1044	1/1:12,0:11:6.86:47,7,0	1/1:18,3:21:15.38:158,15,0	0/0:13,0:13:39.13:0,39,1214	0/1:19,2:21:26.06:587,0,26	1/1:12,3:14:19.05:531,19,0	0/1:10,0:10:2.88:260,0,3
chr10	13609616	.	ACCACAC	A	11607.61	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=10.050;DP=513;FS=8.370;HRun=0;HaplotypeScore=156.7116;InbreedingCoeff=0.9166;MQ=66.81;MQ0=16;MQRankSum=-10.757;QD=32.98;ReadPosRankSum=-1.011;VQSLOD=3.8487;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:72.25:0,72,2226	1/1:1,8:9:21.02:422,21,0	0/0:33,0:14:39.13:0,39,1058	0/0:57,0:24:60.08:0,60,1370	1/1:7,11:18:5.46:40,5,0	1/1:4,13:17:38.87:492,39,0	1/1:7,14:21:44.83:753,45,0	1/1:2,20:20:48.14:817,48,0	1/1:5,12:17:45.14:835,45,0	1/1:6,16:22:56.01:1328,56,0	1/1:2,11:13:6.02:76,6,0	0/0:21,0:20:60.21:0,60,1938	1/1:3,4:7:12:202,12,0	1/1:6,6:12:18.02:343,18,0	1/1:10,4:14:29.98:498,30,0	1/1:9,6:15:42.08:752,42,0	1/1:7,13:20:41.93:912,42,0	1/1:2,15:17:36.12:833,36,0	1/1:3,11:12:30.10:685,30,0	1/1:8,6:14:8.99:97,9,0	1/1:4,20:24:11.98:221,12,0	0/0:11,0:11:33.11:0,33,966	1/1:1,11:10:8.99:95,9,0	1/1:6,15:21:17.51:238,18,0	0/0:13,0:13:39.12:0,39,1143	1/1:3,15:18:42.14:890,42,0	1/1:10,5:14:33.11:681,33,0	1/1:3,7:10:18.06:399,18,0
chr10	13609618	.	CACA	C	7185.80	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=12.095;DP=511;FS=9.471;HRun=0;HaplotypeScore=150.7196;InbreedingCoeff=0.9144;MQ=64.58;MQ0=23;MQRankSum=-10.813;QD=21.26;ReadPosRankSum=0.452;VQSLOD=3.9077;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:66.18:0,66,1456	1/1:9,0:9:21:237,21,0	0/0:41,0:13:39.13:0,39,734	0/0:59,0:23:56.15:0,56,965	1/1:13,3:15:5.19:39,5,0	1/1:16,1:17:38.53:451,39,0	1/1:17,4:21:44.47:556,44,0	1/1:21,0:19:48.12:616,48,0	1/1:14,3:17:44.49:509,44,0	1/1:18,2:20:55.64:615,56,0	1/1:13,0:13:6.02:76,6,0	0/0:22,0:21:59.06:0,59,1269	1/1:5,2:7:11.99:131,12,0	1/1:9,3:12:18.01:214,18,0	1/1:9,3:12:30.10:420,30,0	1/1:10,5:15:42.11:535,42,0	1/1:15,4:19:42.06:450,42,0	1/1:16,1:17:36.09:394,36,0	1/1:15,0:12:30.07:319,30,0	1/1:9,3:12:8.99:97,9,0	1/1:23,0:22:11.24:138,11,0	0/0:11,0:11:33.11:0,33,664	1/1:12,0:10:8.99:95,9,0	1/1:18,3:21:17.08:209,17,0	0/0:15,0:15:40.39:0,40,774	1/1:17,0:17:42.11:495,42,0	1/1:10,5:14:33.09:390,33,0	1/1:7,0:7:18.05:199,18,0
chr10	13609626	.	CCCCGTGTGT	C	3727.77	PASS	AB=0.920;AC=35;AF=0.625;AN=56;BaseQRankSum=11.117;DP=552;FS=1.571;HRun=0;HaplotypeScore=206.5997;InbreedingCoeff=0.4841;MQ=51.42;MQ0=31;MQRankSum=-9.873;QD=9.78;ReadPosRankSum=5.769;VQSLOD=2.4509;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:25:69.24:0,69,1876	1/1:9,0:9:14.56:135,15,0	0/0:38,0:10:30.02:0,30,558	0/0:51,0:15:35.99:0,36,601	0/1:16,3:17:0.39:0,0,0	0/1:19,0:20:2.94:10,0,3	0/1:22,0:22:48.43:48,0,62	0/1:27,0:25:24.69:117,0,25	1/1:15,3:18:27.36:366,27,0	1/1:22,2:24:50.77:408,51,0	1/1:15,0:15:0.13:0,0,0	0/0:24,0:23:69.23:0,69,2159	1/1:5,1:7:4.77:81,5,0	0/1:12,1:15:3.53:217,0,4	1/1:12,2:14:13.60:277,14,0	1/1:10,3:15:29.67:446,30,0	1/1:17,3:21:24.73:347,25,0	1/1:16,1:17:10.60:234,11,0	0/1:19,0:15:7.34:116,0,7	0/1:9,0:11:0:0,0,0	1/1:31,0:30:5.46:32,5,0	0/0:15,0:15:39.09:0,39,1019	0/1:13,0:11:0:0,0,0	0/1:18,2:20:1.43:52,0,1	0/0:15,0:15:39.09:0,39,1002	1/1:19,0:19:11.06:288,11,0	1/1:11,3:13:29.55:429,30,0	1/1:8,0:7:14.68:122,15,0
chr10	13609628	.	CCGTGTGT	C	3142.97	PASS	AB=0.940;AC=37;AF=0.712;AN=52;BaseQRankSum=10.003;DP=543;FS=2.275;HRun=0;HaplotypeScore=191.5463;InbreedingCoeff=0.6417;MQ=50.74;MQ0=32;MQRankSum=-10.711;QD=8.98;ReadPosRankSum=4.119;VQSLOD=2.5496;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:25:69.14:0,69,1316	1/1:9,0:9:13.18:104,13,0	0/0:38,0:10:29.99:0,30,304	0/0:51,0:15:32.37:0,32,301	0/1:18,0:16:0.41:0,0,1	1/1:22,0:22:5.77:26,6,0	0/1:18,0:22:25.47:25,0,26	1/1:22,0:21:20.04:111,20,0	1/1:18,0:18:21.47:340,21,0	1/1:23,0:23:44.39:283,44,0	1/1:13,1:14:0.47:1,0,0	0/0:23,0:22:66.16:0,66,1490	1/1:6,0:6:1.58:67,2,0	0/1:15,0:15:10.09:216,0,10	1/1:13,0:14:17.45:302,17,0	1/1:14,1:15:29.01:482,29,0	1/1:20,0:20:31.31:279,31,0	1/1:17,0:17:19.54:200,20,0	1/1:21,0:16:7.60:81,8,0	./.	1/1:31,1:31:4.77:18,5,0	0/0:15,0:15:35.73:0,36,682	./.	1/1:20,1:20:1.82:48,2,0	0/0:14,0:14:33.99:0,34,668	1/1:17,0:17:29.88:257,30,0	1/1:13,1:13:27.61:401,28,0	1/1:8,0:7:12.99:80,13,0
chr10	13609629	.	CGTGTGT	C	2161.38	PASS	AB=0.948;AC=31;AF=0.646;AN=48;BaseQRankSum=5.364;DP=528;FS=0.870;HRun=0;HaplotypeScore=185.3244;InbreedingCoeff=0.3612;MQ=49.10;MQ0=33;MQRankSum=-6.514;QD=6.78;ReadPosRankSum=0.979;VQSLOD=2.0404;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:25:27.04:0,27,601	1/1:7,1:8:5.51:61,6,0	./.	./.	0/1:15,2:15:0.30:0,0,0	1/1:20,0:22:2.49:6,2,0	0/0:22,0:22:1.55:0,2,59	1/1:20,0:18:8.55:68,9,0	1/1:17,1:18:3.21:239,3,0	1/1:23,0:23:4.33:118,4,0	0/1:12,1:13:0:1,0,0	0/0:21,0:21:33.10:0,33,931	0/1:7,0:7:6.03:54,0,6	0/1:11,2:13:18.91:189,0,19	1/1:8,5:14:18.43:292,18,0	1/1:13,2:15:23.67:400,24,0	1/1:19,1:20:9.03:176,9,0	0/1:16,1:17:10.89:112,0,11	0/1:22,0:17:11.47:11,0,34	./.	0/1:32,0:31:0:0,0,0	0/0:15,0:15:17.88:0,18,459	./.	1/1:20,0:19:2.88:42,3,0	0/0:14,0:14:11.70:0,12,324	1/1:13,2:15:14.87:166,15,0	1/1:12,3:13:20.98:338,21,0	1/1:8,0:7:3.01:35,3,0
chr10	13610086	.	AACTGTCATTGGATGC	A	36281.35	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=16.141;DP=593;FS=4.817;HRun=0;HaplotypeScore=310.8308;InbreedingCoeff=0.9917;MQ=86.49;MQ0=0;MQRankSum=-16.789;QD=85.97;ReadPosRankSum=4.380;VQSLOD=3.9644;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,117,8245	1/1:3,8:11:24.08:982,24,0	0/0:30,0:30:87.73:0,88,4768	0/0:28,0:28:82.31:0,82,4662	1/1:3,9:12:27.08:934,27,0	1/1:4,15:19:42.14:1826,42,0	1/1:8,23:31:51.18:2190,51,0	1/1:8,13:21:39.13:1755,39,0	1/1:3,17:20:42.14:1888,42,0	1/1:3,23:26:69.17:2729,69,0	1/1:3,6:9:15.05:675,15,0	0/0:33,0:33:93.29:0,93,6040	1/1:6,13:19:39.13:1690,39,0	1/1:2,24:26:69.24:3033,69,0	1/1:5,18:23:51.18:2294,51,0	1/1:2,20:22:54.19:2426,54,0	1/1:7,13:20:30.10:1178,30,0	1/1:5,9:14:30.10:1203,30,0	1/1:7,10:17:30.07:1093,30,0	1/1:2,15:17:42.10:1516,42,0	1/1:2,18:20:33.11:1167,33,0	0/0:16,0:16:48.16:0,48,3367	1/1:2,10:12:30.10:1136,30,0	1/1:13,12:25:15.05:577,15,0	0/0:23,0:23:66.23:0,66,4373	1/1:6,24:30:69.24:3021,69,0	1/1:4,17:21:45.15:2024,45,0	1/1:0,7:7:21.07:945,21,0
chr10	13610261	.	T	TCC	24239.57	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=14.297;DP=680;FS=0.355;HRun=3;HaplotypeScore=125.3576;InbreedingCoeff=1.0000;MQ=85.44;MQ0=0;MQRankSum=-5.210;QD=46.08;ReadPosRankSum=1.682;VQSLOD=4.1012;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,102,1428	1/1:0,17:18:48.16:874,48,0	0/0:24,0:24:57.09:0,57,731	0/0:25,0:25:59.98:0,60,806	1/1:2,27:29:72.16:1249,72,0	1/1:0,16:18:39.09:664,39,0	1/1:7,30:38:75.26:1375,75,0	1/1:3,24:27:78.27:1402,78,0	1/1:1,17:18:48.16:879,48,0	1/1:2,32:34:90.29:1617,90,0	1/1:2,15:17:45.11:790,45,0	0/0:30,0:30:84.28:0,84,1176	1/1:3,20:23:57.19:1016,57,0	1/1:2,15:17:42.14:769,42,0	1/1:1,23:24:63.22:1139,63,0	1/1:1,21:22:51.17:930,51,0	1/1:3,16:19:48.16:880,48,0	1/1:2,20:23:54.14:955,54,0	1/1:2,14:16:42.11:693,42,0	1/1:0,18:18:54.18:969,54,0	1/1:3,30:33:78.27:1430,78,0	0/0:16,0:16:48.16:0,48,672	1/1:1,16:17:48.16:880,48,0	1/1:2,25:27:78.22:1395,78,0	0/0:24,0:24:72.24:0,72,1007	1/1:3,35:39:99:1946,111,0	1/1:0,30:30:87.30:1561,87,0	1/1:0,19:19:45.15:825,45,0
chr10	13611406	.	G	GTA	8943.67	PASS	AB=0.846;AC=30;AF=0.536;AN=56;BaseQRankSum=8.205;DP=956;FS=6.676;HRun=0;HaplotypeScore=319.3633;InbreedingCoeff=0.0072;MQ=47.65;MQ0=18;MQRankSum=-6.085;QD=13.49;ReadPosRankSum=4.555;VQSLOD=3.8038;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:56:99:0,147,1904	0/1:5,2:7:3.96:110,0,4	0/0:64,0:24:25.09:0,25,600	0/0:76,0:30:65.67:0,66,816	1/1:23,3:25:2.71:193,3,0	1/1:20,10:30:15.50:531,16,0	1/1:27,11:39:42.53:459,43,0	0/1:56,0:55:99:1025,0,211	0/1:23,6:29:2.35:328,0,2	0/1:17,11:28:91.45:599,0,91	0/1:14,3:17:6.54:197,0,7	0/0:33,0:33:96.17:0,96,1365	1/1:23,11:33:38.06:668,38,0	1/1:24,12:37:44.88:671,45,0	1/1:19,11:30:7.31:414,7,0	1/1:14,16:30:40.36:657,40,0	0/1:15,4:19:52.74:163,0,53	0/1:14,3:16:60.85:234,0,61	0/1:26,5:25:38.61:398,0,39	0/1:27,5:29:15.41:243,0,15	0/1:74,11:82:68.42:548,0,68	0/0:33,0:33:93.11:0,93,1219	1/1:10,2:12:7.64:161,8,0	0/1:32,3:35:67.18:192,0,67	0/0:28,0:28:78.18:0,78,1079	0/1:34,6:40:99:677,0,119	0/1:10,2:14:46.81:205,0,47	0/1:11,3:14:22.58:272,0,23
chr10	13611416	.	G	GT	6972.88	PASS	AB=0.694;AC=24;AF=0.429;AN=56;BaseQRankSum=9.232;DP=973;FS=4.423;HRun=1;HaplotypeScore=320.9214;InbreedingCoeff=-0.3949;MQ=48.33;MQ0=24;MQRankSum=-7.896;QD=10.55;ReadPosRankSum=2.541;VQSLOD=3.3718;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:56:99:0,150,2006	0/1:3,2:7:39.56:66,0,40	0/0:79,1:24:58.86:0,59,611	0/0:83,0:26:38.18:0,38,551	0/1:15,4:21:55.61:143,0,56	0/1:15,7:32:0.11:403,0,0	1/1:20,10:42:17.27:349,17,0	0/1:34,22:55:99:1182,0,429	0/1:12,5:23:57.44:178,0,57	0/1:16,4:30:99:353,0,207	0/1:10,4:17:64.98:166,0,65	0/0:34,0:34:99:0,99,1315	0/1:12,11:34:34.02:595,0,34	1/1:13,10:35:20.24:405,20,0	0/1:19,7:37:99:239,0,110	0/1:7,6:29:5.19:413,0,5	0/1:14,3:21:99:105,0,130	0/1:10,4:17:99:277,0,119	0/1:18,2:20:99:199,0,105	0/1:14,10:26:27.14:246,0,27	0/1:59,22:88:99:379,0,408	0/0:28,0:28:78.23:0,78,1044	0/1:7,1:10:14.31:81,0,14	0/1:22,9:34:99:209,0,103	0/0:27,0:27:72.23:0,72,983	0/1:23,10:39:99:607,0,261	0/1:9,4:16:89.51:188,0,90	0/1:6,3:12:49.92:191,0,50
chr10	13611440	.	GGT	G	11282.43	PASS	AB=0.583;AC=43;AF=0.768;AN=56;BaseQRankSum=8.284;DP=931;FS=1.770;HRun=0;HaplotypeScore=268.9017;InbreedingCoeff=0.8325;MQ=54.37;MQ0=22;MQRankSum=-4.927;QD=19.22;ReadPosRankSum=-1.706;VQSLOD=4.5274;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:52,2:54:20.38:0,20,1274	1/1:4,2:6:12.02:133,12,0	0/0:108,0:21:21.05:0,21,193	0/0:89,2:24:5.32:0,5,275	1/1:7,9:15:23.90:274,24,0	1/1:7,0:20:32.61:156,33,0	1/1:19,0:38:15.50:149,16,0	1/1:22,28:50:92.88:1255,93,0	1/1:5,17:22:54.15:641,54,0	1/1:12,16:27:42.60:510,43,0	1/1:4,6:10:17.97:218,18,0	0/0:33,0:33:16.48:0,16,942	1/1:13,21:34:66.11:747,66,0	1/1:8,18:26:45.09:523,45,0	1/1:8,25:34:62.92:744,63,0	1/1:12,12:25:35.07:433,35,0	1/1:10,11:21:21.26:385,21,0	1/1:6,11:17:33.10:400,33,0	1/1:9,6:15:3.54:232,4,0	1/1:8,8:16:24.06:276,24,0	1/1:40,59:98:99:1927,149,0	0/0:31,0:31:51.17:0,51,798	0/1:4,10:14:13.81:295,0,14	1/1:12,22:35:56.45:751,56,0	0/0:27,0:27:53.92:0,54,820	1/1:22,15:37:52.28:747,52,0	1/1:5,11:16:27.08:325,27,0	1/1:2,3:6:14.88:159,15,0
chr10	13611550	.	T	TTG	19868.78	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=0.798;DP=994;FS=5.861;HRun=0;HaplotypeScore=208.1743;InbreedingCoeff=0.9990;MQ=58.83;MQ0=0;MQRankSum=-10.179;QD=35.29;ReadPosRankSum=1.071;VQSLOD=4.9756;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,138,1755	1/1:4,6:10:21.07:338,21,0	0/0:52,0:46:85.55:0,86,1046	0/0:52,0:49:96.30:0,96,1120	1/1:7,13:20:42.11:648,42,0	1/1:6,22:28:63.21:1039,63,0	1/1:19,22:41:75.22:1181,75,0	1/1:22,38:60:99:2135,132,0	1/1:3,22:25:57.19:939,57,0	1/1:5,28:33:84.01:1360,84,0	1/1:1,10:11:27.09:452,27,0	0/0:42,0:42:99:0,111,1368	1/1:9,22:31:72.23:1170,72,0	1/1:8,22:30:59.87:960,60,0	1/1:7,27:34:78.27:1290,78,0	1/1:4,31:34:75.26:1252,75,0	1/1:7,21:28:72.67:1140,73,0	1/1:13,25:38:74.74:1213,75,0	0/0:25,0:25:56.86:0,57,669	0/0:20,0:20:38.92:0,39,446	0/0:130,0:129:99:0,283,3536	0/0:32,0:32:75.21:0,75,928	1/1:7,22:30:60.12:976,60,0	1/1:11,40:51:97.77:1657,98,0	0/0:22,0:22:48.15:0,48,611	1/1:10,22:31:69.16:1153,69,0	1/1:4,10:14:33.11:551,33,0	1/1:5,7:12:27.08:416,27,0
chr10	13611607	.	AGTGT	A	15260.35	PASS	AB=0.611;AC=40;AF=0.714;AN=56;BaseQRankSum=3.290;DP=939;FS=13.849;HRun=0;HaplotypeScore=226.8319;InbreedingCoeff=0.8601;MQ=59.50;MQ0=17;MQRankSum=-4.466;QD=24.81;ReadPosRankSum=2.291;VQSLOD=3.4650;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:59:99:0,117,2576	1/1:5,9:14:30.05:460,30,0	0/0:69,0:25:23.62:0,24,330	0/0:74,0:23:14.22:0,14,209	1/1:3,11:14:24.06:400,24,0	0/1:3,1:22:0.24:0,0,161	0/0:16,1:36:9.57:0,10,208	1/1:37,7:43:57.18:887,57,0	1/1:11,15:26:39.13:635,39,0	1/1:21,5:26:7.16:360,7,0	1/1:6,10:16:17.73:281,18,0	0/0:32,0:36:80.71:0,81,1658	1/1:8,17:26:51.17:799,51,0	1/1:8,13:21:42.14:611,42,0	1/1:11,22:33:60.20:929,60,0	1/1:12,12:23:37.93:639,38,0	1/1:15,25:40:55.32:1033,55,0	0/1:13,11:24:2.43:580,0,2	1/1:11,4:15:9.03:135,9,0	1/1:7,16:25:45.94:658,46,0	1/1:49,53:101:99:2783,180,0	0/0:36,0:37:83.99:0,84,1795	1/1:7,17:24:45.15:675,45,0	1/1:18,35:53:96.30:1531,96,0	0/0:12,0:12:27.09:0,27,666	1/1:15,22:36:68.47:1041,68,0	1/1:6,11:18:36.99:575,37,0	1/1:3,6:11:15.05:250,15,0
chr10	13611682	.	GTGT	G	100.79	PASS	AB=0.964;AC=16;AF=0.286;AN=56;BaseQRankSum=11.360;DP=655;FS=0.000;HRun=0;HaplotypeScore=228.8153;InbreedingCoeff=-0.1200;MQ=61.97;MQ0=8;MQRankSum=-4.628;QD=0.40;ReadPosRankSum=9.649;VQSLOD=1.2117;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:47:99:0,135,3036	1/1:6,0:6:6.95:21,7,0	0/0:54,0:26:72.55:0,73,1217	0/0:64,0:37:88.76:0,89,1210	0/0:13,0:13:5.91:0,6,75	0/1:16,0:15:44.96:45,0,46	0/0:24,0:23:12.75:0,13,163	0/0:34,0:33:5.30:0,5,395	0/0:14,0:14:3.54:0,4,156	0/1:7,1:8:3.13:3,0,8	0/1:10,2:12:6.24:6,0,58	0/0:31,0:31:87.30:0,87,1979	0/1:19,0:18:5.99:6,0,86	0/1:10,0:11:4.30:4,0,67	0/1:18,0:19:27.71:28,0,33	0/1:19,1:20:34.50:34,0,145	0/1:19,0:19:0.30:0,0,181	0/1:18,0:18:38.79:39,0,138	0/0:23,0:23:1.75:0,2,298	0/0:16,0:14:15.29:0,15,131	0/1:47,0:46:9.07:9,0,450	0/0:27,0:27:71.46:0,71,1461	0/0:11,0:11:6.56:0,7,25	0/1:41,0:41:23.35:23,0,158	0/0:20,0:20:45.62:0,46,916	0/0:26,0:26:12.75:0,13,316	0/1:12,0:12:18.94:19,0,80	1/1:1,0:1:0.89:2,1,0
chr10	13611693	.	T	TA	3851.55	PASS	AB=0.669;AC=33;AF=0.589;AN=56;BaseQRankSum=10.546;DP=697;FS=20.336;HRun=0;HaplotypeScore=220.0451;InbreedingCoeff=0.2202;MQ=55.24;MQ0=12;MQRankSum=-5.232;QD=9.56;ReadPosRankSum=5.301;VQSLOD=2.2855;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:47:99:0,129,1791	1/1:2,5:7:14.98:144,15,0	0/0:66,0:24:60.08:0,60,734	0/0:79,0:34:59.03:0,59,671	0/0:6,8:15:5.69:0,6,32	0/1:15,7:21:17.03:163,0,17	1/1:14,10:23:8.63:278,9,0	0/1:24,12:36:99:335,0,145	1/1:2,8:10:14.11:137,14,0	0/1:7,5:12:30.28:110,0,30	1/1:7,5:12:4.97:78,5,0	0/0:37,0:37:99:0,105,1462	1/1:9,11:20:25.04:243,25,0	1/1:10,7:17:9.92:122,10,0	1/1:11,11:21:20.59:196,21,0	0/1:7,13:19:20.89:276,0,21	0/1:6,7:13:31.47:162,0,31	0/1:6,14:19:53.98:317,0,54	0/1:10,13:23:53.85:234,0,54	1/1:7,8:13:0.20:66,0,0	0/1:26,18:44:45.52:203,0,46	0/0:26,0:26:68.91:0,69,899	1/1:2,10:12:9.26:40,9,0	1/1:11,29:40:12.72:323,13,0	0/0:22,0:22:54.60:0,55,712	0/1:8,13:21:53.47:242,0,53	1/1:1,8:9:14.83:160,15,0	1/1:2,1:3:2.99:23,3,0
chr10	13611694	.	GTGTA	G	6322.99	PASS	AB=0.636;AC=38;AF=0.679;AN=56;BaseQRankSum=10.025;DP=692;FS=20.673;HRun=0;HaplotypeScore=227.7310;InbreedingCoeff=0.5231;MQ=54.11;MQ0=12;MQRankSum=-7.045;QD=15.27;ReadPosRankSum=5.983;VQSLOD=3.0752;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:47:99:0,112,3288	1/1:2,4:6:15.01:180,15,0	0/0:68,0:24:55.94:0,56,980	0/0:78,0:34:63.26:0,63,808	0/1:7,8:15:0.05:0,0,2	1/1:15,7:21:24.22:355,24,0	1/1:13,10:22:36.64:381,37,0	1/1:24,12:36:2.81:636,3,0	1/1:2,8:10:14.57:228,15,0	1/1:7,5:12:18.86:252,19,0	1/1:7,5:12:14.11:151,14,0	0/0:37,0:37:99:0,105,2349	1/1:10,11:20:32.78:393,33,0	0/1:9,7:16:41:139,0,41	1/1:10,11:20:22.43:284,22,0	0/1:7,13:19:9.35:467,0,9	0/1:4,7:12:8.22:253,0,8	1/1:6,13:19:11.43:508,11,0	1/1:9,13:22:16.04:400,16,0	1/1:8,8:13:3.92:40,4,0	0/1:27,18:44:38.61:285,0,39	0/0:25,0:25:65.57:0,66,1444	0/1:2,10:12:1.79:74,0,2	1/1:11,29:40:34.90:507,35,0	0/0:22,0:22:50.60:0,51,929	1/1:8,13:21:28.66:479,29,0	1/1:0,8:9:20.98:272,21,0	1/1:2,1:3:2.95:38,3,0
chr10	13611698	.	A	AG	8087.81	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=9.643;DP=722;FS=11.956;HRun=1;HaplotypeScore=210.7013;InbreedingCoeff=0.8908;MQ=52.15;MQ0=12;MQRankSum=-8.732;QD=18.38;ReadPosRankSum=1.161;VQSLOD=3.1528;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,1:47:99:0,112,1640	1/1:4,2:6:15:166,15,0	0/0:67,0:22:51.51:0,52,617	0/0:80,1:34:52.48:0,52,579	1/1:14,3:18:5.70:83,6,0	1/1:16,7:22:36.67:489,37,0	1/1:16,8:23:43.95:547,44,0	1/1:28,14:41:52.84:1198,53,0	1/1:12,0:12:24.49:233,24,0	1/1:8,7:15:36.08:443,36,0	1/1:7,4:12:14.91:154,15,0	0/0:37,0:37:99:0,105,1354	1/1:19,3:20:36.07:423,36,0	1/1:10,7:17:21.72:215,22,0	1/1:14,8:21:24.26:298,24,0	1/1:18,5:22:29.40:491,29,0	1/1:11,1:13:7.59:278,8,0	1/1:19,1:19:15.14:512,15,0	1/1:14,7:21:51.15:659,51,0	1/1:13,3:13:5.92:76,6,0	1/1:27,18:44:32.02:391,32,0	0/0:24,0:24:62.93:0,63,801	1/1:11,1:12:10.57:76,11,0	1/1:36,7:43:42.58:545,43,0	0/0:21,0:21:51.16:0,51,655	1/1:19,2:21:53.91:534,54,0	1/1:9,0:9:20.28:241,20,0	1/1:1,2:3:3.01:35,3,0
chr10	13611712	.	G	GGTGTGT	4550.61	PASS	AB=0.959;AC=38;AF=0.731;AN=52;BaseQRankSum=2.799;DP=761;FS=0.718;HRun=0;HaplotypeScore=279.9441;InbreedingCoeff=0.5475;MQ=44.38;MQ0=22;MQRankSum=-5.537;QD=9.46;ReadPosRankSum=-4.249;VQSLOD=2.2764;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:45:36.11:0,36,663	1/1:5,0:6:3.01:78,3,0	./.	./.	0/1:21,0:21:0:1,0,0	0/0:23,0:24:14.60:0,15,469	0/0:26,0:25:14.35:0,14,329	1/1:46,0:45:17.18:277,17,0	1/1:11,0:15:6.02:139,6,0	1/1:18,0:21:18.06:357,18,0	0/1:12,0:11:0:0,0,0	0/0:32,0:37:42.13:0,42,724	1/1:21,1:24:23.10:552,23,0	1/1:13,0:20:5.11:203,5,0	1/1:23,5:25:12.02:306,12,0	1/1:19,4:26:23.91:629,24,0	1/1:16,0:19:13.45:279,13,0	0/1:19,2:21:15.20:401,0,15	1/1:22,2:22:9.90:188,10,0	1/1:19,1:16:5.04:62,5,0	1/1:45,4:51:4.05:85,4,0	0/0:23,0:25:42.13:0,42,778	1/1:9,0:10:0.69:39,1,0	1/1:42,0:43:7.27:155,7,0	0/1:17,0:19:15.77:16,0,430	1/1:20,0:21:12.04:306,12,0	1/1:10,0:11:9.01:115,9,0	1/1:5,1:8:21.02:363,21,0
chr10	13611729	.	G	GAATACA	262.54	PASS	AB=0.857;AC=2;AF=0.036;AN=56;BaseQRankSum=4.886;DP=763;FS=29.220;HRun=0;HaplotypeScore=257.3187;InbreedingCoeff=-0.0430;MQ=41.52;MQ0=29;MQRankSum=-4.892;QD=6.91;ReadPosRankSum=5.019;VQSLOD=1.0779;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:39:99:0,105,2468	0/0:7,0:7:17.78:0,18,341	0/0:47,0:8:24.05:0,24,467	0/0:61,0:17:45.15:0,45,1126	0/0:21,0:20:6.49:0,6,153	0/0:29,0:29:57.41:0,57,1338	0/0:30,0:29:39.18:0,39,962	0/0:44,0:43:99:0,112,2678	0/0:13,0:13:15.52:0,16,326	0/0:26,0:25:75.15:0,75,1687	0/0:9,0:8:6.02:0,6,153	0/0:35,0:35:93.79:0,94,2183	0/0:28,0:24:25.40:0,25,894	0/0:20,0:20:22.76:0,23,299	0/0:35,0:31:12.71:0,13,608	0/1:28,0:27:4.27:4,0,650	0/0:20,0:19:25.38:0,25,598	0/0:22,0:21:49.30:0,49,1079	0/0:24,0:21:54.12:0,54,1316	0/0:18,0:14:11.47:0,11,226	0/0:48,0:47:49.58:0,50,908	0/0:26,0:25:66.23:0,66,1624	0/0:12,0:12:16.60:0,17,328	0/0:44,0:42:47.33:0,47,912	0/0:25,0:24:66.23:0,66,1589	0/0:24,0:22:55.36:0,55,1264	0/0:15,0:14:39.13:0,39,828	0/1:6,4:10:99:336,0,245
chr10	13612304	.	A	AT	12254.36	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=0.897;DP=482;FS=0.899;HRun=5;HaplotypeScore=93.6357;InbreedingCoeff=0.9783;MQ=69.49;MQ0=0;MQRankSum=-5.807;QD=32.59;ReadPosRankSum=0.719;VQSLOD=4.9403;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:66.16:0,66,708	1/1:0,5:5:15.05:193,15,0	0/0:15,0:15:44.44:0,44,405	0/0:13,0:13:30.06:0,30,313	1/1:1,33:34:96.13:1179,96,0	1/1:3,20:23:60.11:763,60,0	1/1:3,11:14:36.07:450,36,0	1/1:3,16:19:48.14:606,48,0	1/1:1,11:12:33.11:429,33,0	1/1:2,20:22:63.15:769,63,0	1/1:3,15:18:50.95:601,51,0	0/0:21,0:21:63.09:0,63,662	1/1:3,19:22:57.14:711,57,0	1/1:2,12:13:30.10:394,30,0	1/1:1,10:11:24.08:315,24,0	1/1:4,4:8:17.99:215,18,0	1/1:2,10:12:27:331,27,0	1/1:4,10:14:33.09:413,33,0	1/1:3,14:17:42.13:532,42,0	1/1:2,17:19:51.16:659,51,0	1/1:2,4:6:9.03:118,9,0	0/0:9,0:9:24.06:0,24,258	1/1:1,14:15:42.14:548,42,0	1/1:2,8:10:14.14:225,14,0	0/0:18,0:18:51.13:0,51,547	1/1:2,24:26:75.22:945,75,0	1/1:2,29:31:84.20:1076,84,0	1/1:1,23:24:60.19:781,60,0
chr10	13612354	.	CCG	C	8628.14	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=7.815;DP=461;FS=3.631;HRun=0;HaplotypeScore=138.9029;InbreedingCoeff=0.9405;MQ=60.04;MQ0=6;MQRankSum=-6.930;QD=27.13;ReadPosRankSum=2.657;VQSLOD=6.0736;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:54.10:0,54,788	1/1:2,7:10:30.02:289,30,0	0/0:49,0:22:14.31:0,14,525	0/0:43,0:15:35.16:0,35,282	1/1:6,12:23:57.11:607,57,0	1/1:6,5:15:39.03:385,39,0	1/1:3,5:11:33.02:323,33,0	1/1:18,3:29:72.13:746,72,0	1/1:3,5:12:35.98:342,36,0	1/1:9,6:22:60.05:616,60,0	1/1:11,2:19:51.09:534,51,0	0/0:11,0:11:29.68:0,30,429	1/1:10,5:16:44.84:431,45,0	1/1:7,3:9:24:218,24,0	1/1:8,5:15:41.40:376,41,0	1/1:1,3:4:11.89:91,12,0	1/1:4,4:11:30.01:294,30,0	1/1:2,5:9:27.01:282,27,0	1/1:7,0:11:30.07:321,30,0	1/1:6,3:14:42.02:452,42,0	1/1:4,1:4:8.98:86,9,0	0/0:1,0:1:3.01:0,3,40	1/1:6,5:12:33.04:332,33,0	1/1:5,5:13:32.99:341,33,0	0/0:16,0:16:48.05:0,48,646	1/1:8,2:15:45.03:457,45,0	1/1:15,6:28:77.98:777,78,0	1/1:4,8:14:35.97:329,36,0
chr10	13612355	.	CG	C	1108.58	PASS	AB=0.912;AC=38;AF=0.679;AN=56;BaseQRankSum=11.341;DP=456;FS=8.584;HRun=1;HaplotypeScore=155.1423;InbreedingCoeff=0.4984;MQ=59.05;MQ0=7;MQRankSum=-10.298;QD=3.54;ReadPosRankSum=8.251;VQSLOD=-0.4298;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:54.17:0,54,792	1/1:9,1:10:16.05:64,16,0	0/0:51,0:21:21.05:0,21,565	0/0:43,0:14:36.70:0,37,378	1/1:21,1:23:19.76:86,20,0	1/1:12,1:14:3.09:31,3,0	1/1:10,0:11:7.87:42,8,0	1/1:28,0:28:8.43:83,8,0	1/1:10,1:12:11.22:49,11,0	1/1:22,0:22:31.27:141,31,0	1/1:12,3:18:22.22:90,22,0	0/0:11,0:11:29.69:0,30,413	0/1:14,2:16:9.49:34,0,9	0/1:8,1:9:4.25:16,0,4	0/1:10,4:15:1.47:47,0,1	1/1:4,0:4:8.55:35,9,0	1/1:10,1:11:7.02:33,7,0	1/1:9,0:9:4.67:42,5,0	1/1:8,1:10:15.38:68,15,0	1/1:12,1:14:22.31:101,22,0	0/1:5,0:4:1.51:7,0,2	0/0:1,0:1:3.01:0,3,45	1/1:8,3:11:18.66:63,19,0	0/1:13,0:13:1.32:26,0,1	0/0:16,0:16:48.16:0,48,720	1/1:13,1:15:21.40:101,21,0	1/1:23,2:28:6.60:90,7,0	0/1:13,0:13:11.18:37,0,11
chr10	13612362	.	TCTC	T	9024.66	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=7.533;DP=458;FS=4.438;HRun=0;HaplotypeScore=135.6222;InbreedingCoeff=0.9257;MQ=49.60;MQ0=17;MQRankSum=-6.749;QD=29.02;ReadPosRankSum=5.350;VQSLOD=5.1408;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:47.85:0,48,775	1/1:10,0:10:27.01:322,27,0	0/0:52,0:18:30.48:0,30,566	0/0:48,0:12:21.64:0,22,296	1/1:23,0:23:51.14:628,51,0	1/1:13,0:12:20.70:347,21,0	1/1:11,0:11:30.07:377,30,0	1/1:23,0:21:17.93:465,18,0	1/1:11,0:11:33.08:432,33,0	1/1:22,2:23:31.59:648,32,0	1/1:19,0:18:48.16:691,48,0	0/0:10,0:10:30.10:0,30,487	1/1:14,1:16:40.43:545,40,0	1/1:7,0:6:18.05:223,18,0	1/1:12,0:12:33.09:401,33,0	1/1:6,0:6:12:131,12,0	1/1:12,0:11:17.08:315,17,0	1/1:10,0:8:24.03:279,24,0	1/1:12,0:10:19.98:285,20,0	1/1:17,0:16:42.11:544,42,0	1/1:6,1:6:9.03:121,9,0	0/0:3,0:3:2.85:0,3,48	1/1:12,0:11:30.09:408,30,0	1/1:11,0:11:27.04:356,27,0	0/0:16,0:16:42.11:0,42,647	1/1:18,0:17:19.24:410,19,0	1/1:24,2:26:65.20:858,65,0	1/1:11,0:11:10.20:242,10,0
chr10	13612363	.	CTCTTTTT	C	8191.15	PASS	AB=0.917;AC=43;AF=0.768;AN=56;BaseQRankSum=8.010;DP=461;FS=9.936;HRun=0;HaplotypeScore=167.0175;InbreedingCoeff=0.8591;MQ=49.35;MQ0=17;MQRankSum=-6.918;QD=26.59;ReadPosRankSum=3.716;VQSLOD=3.4306;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:48.11:0,48,1273	1/1:3,5:9:23.95:382,24,0	0/0:52,0:18:36.30:0,36,474	0/0:48,0:12:29.12:0,29,289	1/1:14,7:23:44.07:425,44,0	1/1:10,2:12:19.67:282,20,0	1/1:7,3:11:28.21:306,28,0	0/1:20,2:20:3.19:435,0,3	1/1:8,3:11:31.55:400,32,0	1/1:20,4:23:60.38:663,60,0	1/1:15,4:18:35.96:494,36,0	0/0:12,0:11:33.02:0,33,568	1/1:12,3:16:33.61:403,34,0	1/1:2,5:6:17.68:253,18,0	1/1:4,7:11:29.94:486,30,0	1/1:0,5:6:12.04:221,12,0	1/1:8,4:11:26.89:337,27,0	1/1:7,3:8:20.35:254,20,0	1/1:12,0:10:26.52:214,27,0	1/1:14,3:16:41.07:469,41,0	1/1:6,1:6:8.83:93,9,0	0/0:4,0:4:9.03:0,9,145	1/1:7,5:11:29.01:384,29,0	1/1:8,3:11:23.47:262,23,0	0/0:17,0:17:39.06:0,39,642	1/1:16,2:17:1.75:383,2,0	1/1:21,4:26:64.01:686,64,0	1/1:7,3:11:27.29:360,27,0
chr10	13612364	.	TC	T	4010.70	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=8.509;DP=467;FS=8.938;HRun=1;HaplotypeScore=140.8578;InbreedingCoeff=0.9259;MQ=48.67;MQ0=24;MQRankSum=-6.799;QD=12.90;ReadPosRankSum=3.880;VQSLOD=2.3163;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:26.20:0,26,332	1/1:9,0:9:24:118,24,0	0/0:52,0:18:19.60:0,20,275	0/0:48,0:12:28.41:0,28,186	1/1:22,1:23:48.61:294,49,0	1/1:12,0:11:27.65:153,28,0	1/1:11,0:11:27.44:159,27,0	1/1:21,1:20:32.79:230,33,0	1/1:11,0:11:30.04:165,30,0	1/1:23,0:22:47.60:345,48,0	1/1:20,0:18:47.24:323,47,0	0/0:15,0:13:28.90:0,29,237	1/1:14,2:16:39.62:244,40,0	1/1:7,0:6:16.50:91,17,0	1/1:11,0:11:26.59:134,27,0	1/1:6,0:6:10.27:39,10,0	1/1:13,0:11:20.07:134,20,0	1/1:10,0:7:19.30:106,19,0	1/1:13,0:10:26.26:157,26,0	1/1:17,0:16:40.22:261,40,0	1/1:7,0:6:8.87:56,9,0	0/0:6,0:6:2.38:0,2,24	1/1:12,0:11:27.97:169,28,0	1/1:12,0:11:23.45:148,23,0	0/0:15,0:15:30.45:0,30,263	1/1:18,0:17:29.64:208,30,0	1/1:26,0:26:65.11:383,65,0	1/1:12,0:11:12.90:94,13,0
chr10	13612365	.	CTTTTT	C	4761.92	PASS	AB=0.905;AC=40;AF=0.714;AN=56;BaseQRankSum=6.403;DP=462;FS=21.806;HRun=18;HaplotypeScore=159.0300;InbreedingCoeff=0.5836;MQ=46.90;MQ0=26;MQRankSum=-4.674;QD=15.61;ReadPosRankSum=4.599;VQSLOD=0.2855;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:20:44.51:0,45,896	1/1:9,0:9:6.85:251,7,0	0/0:52,0:18:17.12:0,17,172	0/0:44,0:11:14.53:0,15,120	1/1:21,1:22:12.38:191,12,0	1/1:10,2:11:7.44:136,7,0	1/1:9,1:10:16.59:165,17,0	0/1:19,3:20:31.55:276,0,32	1/1:9,0:9:20.26:248,20,0	1/1:22,1:22:32.87:390,33,0	1/1:20,0:18:6.83:255,7,0	0/0:16,0:13:18.05:0,18,361	0/1:15,1:16:1.82:216,0,2	1/1:7,0:6:9.77:162,10,0	1/1:11,0:11:26.90:341,27,0	1/1:6,0:6:12.04:158,12,0	1/1:12,1:11:20.56:218,21,0	1/1:10,0:7:1.93:146,2,0	1/1:12,0:9:14.08:95,14,0	0/1:16,2:17:0.27:239,0,0	1/1:6,1:6:2.81:41,3,0	0/0:6,0:6:9.03:0,9,158	1/1:11,1:11:22.51:249,23,0	1/1:13,0:11:15.31:150,15,0	0/0:13,0:15:29.42:0,29,330	0/1:16,2:17:16.56:224,0,17	1/1:24,0:25:23.62:363,24,0	1/1:8,2:9:20.89:247,21,0
chr10	13612378	.	T	TC	799.80	PASS	AB=0.892;AC=18;AF=0.321;AN=56;BaseQRankSum=3.838;DP=501;FS=8.857;HRun=0;HaplotypeScore=133.1939;InbreedingCoeff=-0.4671;MQ=40.13;MQ0=48;MQRankSum=-3.855;QD=2.61;ReadPosRankSum=-1.388;VQSLOD=2.5345;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:21:46.38:0,46,405	0/1:9,1:10:1.25:1,0,114	0/0:43,0:12:19.55:0,20,162	0/0:35,2:7:14.36:0,14,101	0/1:28,3:28:75.57:76,0,183	0/1:7,2:8:20.67:21,0,68	0/1:10,0:10:33.58:34,0,48	0/1:21,5:23:92.12:92,0,167	0/1:12,2:14:33.09:33,0,129	0/1:16,4:17:88.53:89,0,123	0/1:14,7:18:76.40:138,0,76	0/0:15,0:10:20.87:0,21,164	0/1:15,1:15:54.25:54,0,82	0/0:12,0:10:8.54:0,9,132	0/0:11,1:11:7.11:0,7,136	0/0:13,0:13:28.61:0,29,183	0/1:17,2:14:35.40:35,0,100	0/1:15,1:8:6.91:7,0,86	0/1:11,2:10:43.36:72,0,43	0/1:19,3:21:82.73:83,0,118	0/1:7,0:6:15.08:16,0,15	0/0:8,0:8:11.87:0,12,80	0/1:9,2:9:27.20:74,0,27	0/1:16,2:15:27.44:27,0,92	0/0:15,0:15:35.22:0,35,279	0/1:18,1:18:13.85:14,0,186	0/1:22,3:25:89.64:90,0,210	0/0:13,0:10:5.98:0,6,94
chr10	13612379	.	TTTTTC	T	2284.86	PASS	AB=0.992;AC=23;AF=0.411;AN=56;BaseQRankSum=12.362;DP=502;FS=15.910;HRun=0;HaplotypeScore=153.5641;InbreedingCoeff=-0.4058;MQ=40.20;MQ0=49;MQRankSum=-3.923;QD=6.58;ReadPosRankSum=9.008;VQSLOD=0.5316;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:22:35.19:0,35,785	0/1:10,0:10:13.87:149,0,14	0/0:43,0:12:7.57:0,8,54	0/0:37,0:7:5.58:0,6,31	0/1:31,0:28:28.28:28,0,163	0/1:10,0:8:23.43:52,0,23	0/1:10,0:10:23.61:82,0,24	0/1:27,0:24:87.93:88,0,159	0/1:13,1:14:41.04:138,0,41	1/1:19,1:17:19.31:226,19,0	0/1:21,0:18:31.61:103,0,32	0/0:15,0:10:17.70:0,18,271	0/1:16,0:15:2.73:129,0,3	0/1:12,0:10:61.51:83,0,62	0/1:12,0:11:2.33:200,0,2	0/1:13,0:13:58.93:59,0,88	0/1:19,0:14:63.46:100,0,63	0/1:16,0:8:11.54:103,0,12	0/0:13,0:10:2.53:0,3,73	0/1:21,1:21:99:126,0,116	0/1:8,0:7:15.05:15,0,28	0/0:9,0:9:14.37:0,14,189	1/1:11,0:9:6.94:156,7,0	0/1:18,0:15:40.18:98,0,40	0/0:13,0:13:3.06:0,3,206	0/1:19,0:18:56.75:204,0,57	0/1:24,1:25:65.14:168,0,65	0/1:13,0:10:21.36:137,0,21
chr10	13613403	.	GTCATCATCA	G	9072.98	PASS	AB=0.772;AC=30;AF=0.536;AN=56;BaseQRankSum=11.235;DP=921;FS=37.956;HRun=0;HaplotypeScore=454.0639;InbreedingCoeff=0.0095;MQ=54.76;MQ0=0;MQRankSum=-13.667;QD=13.21;ReadPosRankSum=-3.797;VQSLOD=1.6744;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:75,0:75:99:0,205,7950	1/1:6,2:8:19.39:248,19,0	0/0:33,0:29:81.25:0,81,2420	0/0:34,0:31:81.12:0,81,2445	1/1:17,5:22:27.88:141,28,0	0/1:12,11:23:99:231,0,297	1/1:30,12:42:21.56:350,22,0	0/1:36,2:37:99:616,0,283	0/1:41,10:51:99:483,0,347	0/1:19,11:29:3.96:801,0,4	1/1:7,4:11:17.42:76,17,0	0/0:34,0:34:96.32:0,96,3950	0/1:16,18:34:99:640,0,186	0/1:34,18:52:99:346,0,215	0/1:46,31:77:99:440,0,284	0/1:49,8:57:99:773,0,207	0/1:14,3:17:51.58:118,0,52	0/1:12,7:19:99:313,0,330	0/1:23,3:26:99:264,0,178	1/1:9,4:13:20.20:109,20,0	1/1:30,3:33:26.11:154,26,0	0/0:29,0:30:75.26:0,75,3288	1/1:4,8:12:16.34:75,16,0	1/1:31,6:37:24.81:158,25,0	0/0:28,0:28:81.28:0,81,3588	0/1:21,23:43:50.64:1670,0,51	0/1:17,15:31:99:794,0,196	0/1:7,2:9:20.27:272,0,20
chr10	13613410	.	TCA	T	1916.95	PASS	AB=0.906;AC=29;AF=0.518;AN=56;BaseQRankSum=10.564;DP=903;FS=6.391;HRun=0;HaplotypeScore=425.3619;InbreedingCoeff=-0.0738;MQ=49.08;MQ0=0;MQRankSum=-12.046;QD=2.85;ReadPosRankSum=-4.161;VQSLOD=0.4284;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:70,0:70:99:0,202,3989	1/1:9,0:9:10.11:47,10,0	0/0:32,0:27:81.25:0,81,1487	0/0:36,1:32:90.60:0,91,1550	1/1:18,4:22:11.40:69,11,0	0/1:23,1:24:78.27:78,0,286	0/1:39,3:42:26.45:157,0,26	0/1:29,10:37:99:131,0,422	0/1:47,4:51:99:148,0,335	0/1:17,8:23:34.09:117,0,34	1/1:12,1:13:11.53:48,12,0	0/0:34,0:34:99:0,102,1954	0/1:36,2:38:99:116,0,232	0/1:50,2:52:99:133,0,216	0/1:69,5:74:99:300,0,272	0/1:56,6:62:99:164,0,258	0/1:17,0:17:1.99:2,0,78	0/1:18,1:19:27.50:27,0,322	0/1:18,1:19:0.01:0,0,267	1/1:10,2:12:7.49:44,7,0	1/1:23,4:27:3.16:15,3,0	0/0:28,0:28:77.14:0,77,1548	1/1:12,1:12:5.93:40,6,0	1/1:36,1:37:16.04:74,16,0	0/0:29,0:29:84.29:0,84,1676	0/1:36,6:41:99:234,0,111	0/1:24,4:27:99:129,0,262	0/1:6,2:8:20.46:20,0,33
chr10	13613421	.	GTCA	G	2674.68	PASS	AB=0.877;AC=37;AF=0.661;AN=56;BaseQRankSum=15.392;DP=977;FS=16.210;HRun=0;HaplotypeScore=461.8821;InbreedingCoeff=0.5178;MQ=41.44;MQ0=3;MQRankSum=-12.337;QD=3.68;ReadPosRankSum=0.522;VQSLOD=0.0229;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:69,0:68:99:0,168,2744	1/1:8,2:10:6.36:31,6,0	0/0:41,0:31:44.94:0,45,479	0/0:39,0:29:14.18:0,14,404	0/1:19,3:25:0:0,0,1	1/1:27,1:28:23.63:173,24,0	0/1:44,0:44:0.06:68,0,0	0/1:33,4:46:56.33:353,0,56	1/1:47,4:51:5.36:126,5,0	0/1:22,1:23:1.88:133,0,2	1/1:14,3:18:1.22:3,1,0	0/0:37,0:37:99:0,105,1726	1/1:34,3:38:39.68:253,40,0	1/1:51,4:57:29.19:175,29,0	1/1:68,5:76:38.71:184,39,0	0/1:59,0:64:9.45:9,0,225	1/1:13,1:15:8.55:65,9,0	1/1:21,0:21:13.42:220,13,0	0/1:23,1:25:3.03:129,0,3	1/1:12,1:15:1.55:4,2,0	1/1:30,0:30:0.47:1,0,0	0/0:33,0:33:79.40:0,79,1223	0/1:11,1:13:0:0,0,0	1/1:35,1:37:7.11:19,7,0	0/0:31,0:30:75.23:0,75,1336	1/1:36,4:44:83.27:606,83,0	1/1:29,2:30:25.63:267,26,0	1/1:7,0:7:5.48:28,5,0
chr10	13613427	.	A	ATCGTCGTCG	12618.25	PASS	AB=0.860;AC=39;AF=0.696;AN=56;BaseQRankSum=16.615;DP=1017;FS=1.533;HRun=0;HaplotypeScore=529.1892;InbreedingCoeff=0.6321;MQ=39.48;MQ0=4;MQRankSum=-14.534;QD=17.45;ReadPosRankSum=3.669;VQSLOD=0.9847;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:70,0:69:99:0,196,5119	1/1:7,1:11:6:94,6,0	0/0:40,0:31:72.71:0,73,1424	0/0:44,0:33:83.12:0,83,1452	1/1:19,2:25:0.73:2,1,0	1/1:17,6:27:24.08:882,24,0	1/1:23,19:46:14.67:206,15,0	0/1:55,0:49:99:1288,0,124	1/1:26,17:52:39.25:1144,39,0	1/1:22,0:21:10.86:353,11,0	1/1:16,1:21:2.70:8,3,0	0/0:39,0:39:99:0,108,3014	1/1:29,7:42:51.05:1111,51,0	1/1:34,15:58:27.09:877,27,0	1/1:46,19:75:23.96:917,24,0	1/1:25,0:68:48.01:386,48,0	1/1:11,2:17:11.46:291,11,0	0/1:12,7:21:17.71:1220,0,18	1/1:20,2:27:7.90:891,8,0	0/1:19,1:22:0:0,0,0	1/1:20,9:37:1.92:38,2,0	0/0:35,0:35:99:0,99,2496	1/1:14,0:13:0.47:1,0,0	0/0:14,15:36:1.10:0,1,2	0/0:30,0:29:84.28:0,84,2339	1/1:45,0:45:99:1559,100,0	1/1:24,4:29:62.77:1181,63,0	1/1:5,0:7:8.63:171,9,0
chr10	13613450	.	CATT	C	2795.25	PASS	AB=1.000;AC=39;AF=0.696;AN=56;BaseQRankSum=14.405;DP=897;FS=0.342;HRun=0;HaplotypeScore=458.9486;InbreedingCoeff=0.7934;MQ=48.09;MQ0=4;MQRankSum=-13.520;QD=4.44;ReadPosRankSum=-1.704;VQSLOD=0.6387;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:62,0:61:99:0,186,4039	1/1:14,0:14:4.98:24,5,0	0/0:34,0:32:67.22:0,67,1433	0/0:38,0:29:83.46:0,83,1498	0/0:17,0:17:2.13:0,2,5	1/1:28,0:28:21.57:135,22,0	1/1:37,1:38:18.72:107,19,0	1/1:47,3:44:60.16:456,60,0	1/1:52,0:52:16.13:140,16,0	1/1:14,1:14:10.96:143,11,0	0/1:19,0:19:0.09:0,0,2	0/0:42,0:42:99:0,126,2661	1/1:37,2:39:56.79:343,57,0	1/1:57,1:58:31.21:162,31,0	1/1:63,1:64:40.17:177,40,0	1/1:67,3:70:6.55:122,7,0	1/1:13,1:14:13.91:90,14,0	1/1:16,1:17:21.50:222,22,0	1/1:15,2:17:10.11:141,10,0	1/1:28,0:28:14.05:77,14,0	0/0:24,0:24:0.79:0,1,1	0/0:30,0:30:84.26:0,84,1849	1/1:12,0:11:2.69:17,3,0	1/1:28,1:29:6.95:19,7,0	0/0:21,0:20:63.20:0,63,1393	1/1:34,2:35:23.68:276,24,0	1/1:24,1:24:42.78:297,43,0	1/1:4,0:4:5.80:32,6,0
chr10	13613451	.	ATTG	A	5206.22	PASS	AB=0.670;AC=35;AF=0.625;AN=56;BaseQRankSum=13.989;DP=902;FS=4.045;HRun=0;HaplotypeScore=452.7397;InbreedingCoeff=0.5960;MQ=50.96;MQ0=4;MQRankSum=-12.981;QD=8.55;ReadPosRankSum=-0.045;VQSLOD=2.8473;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:63,0:62:99:0,190,4156	1/1:5,9:14:1.23:36,1,0	0/0:35,0:33:50.96:0,51,1384	0/0:42,0:33:82.06:0,82,1629	0/0:8,9:17:2.13:0,2,5	1/1:12,16:28:12.53:247,13,0	1/1:21,16:37:17.38:189,17,0	1/1:30,20:44:11.35:703,11,0	1/1:16,36:52:40.63:343,41,0	0/1:7,8:14:1.27:233,0,1	0/0:5,14:19:0.38:0,0,2	0/0:42,0:42:99:0,123,2646	1/1:17,22:39:34.28:575,34,0	1/1:22,36:58:32.33:286,32,0	1/1:25,39:64:39.01:266,39,0	1/1:28,42:70:42.55:390,43,0	1/1:7,7:14:13.89:156,14,0	1/1:5,12:17:3.50:327,3,0	0/1:6,11:17:5.32:300,0,5	1/1:6,22:28:14.32:150,14,0	0/0:11,13:24:0.79:0,1,1	0/0:30,0:30:78.26:0,78,1749	1/1:7,5:11:2.75:35,3,0	1/1:12,17:29:7:19,7,0	0/0:21,0:20:63.19:0,63,1314	0/1:24,12:35:56.54:410,0,57	1/1:7,18:24:34.52:504,35,0	1/1:2,2:4:2.36:36,2,0
chr10	13613457	.	GTCA	G	4540.35	PASS	AB=0.682;AC=37;AF=0.661;AN=56;BaseQRankSum=14.866;DP=933;FS=0.000;HRun=0;HaplotypeScore=472.6210;InbreedingCoeff=0.4325;MQ=54.18;MQ0=4;MQRankSum=-13.117;QD=6.47;ReadPosRankSum=-1.024;VQSLOD=2.0848;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:67,0:66:99:0,193,4102	0/1:6,9:15:3.56:60,0,4	0/0:35,0:33:76.57:0,77,1360	0/0:41,0:33:85.78:0,86,1637	1/1:13,9:22:1.45:4,1,0	1/1:12,16:28:5.27:208,5,0	1/1:17,16:33:21.91:184,22,0	0/1:31,18:45:54.19:456,0,54	1/1:21,35:56:46.64:328,47,0	0/1:12,6:17:14.32:220,0,14	1/1:7,14:21:10.47:45,10,0	0/0:39,0:39:99:0,114,2514	1/1:18,22:40:31.86:436,32,0	1/1:27,36:63:38.78:280,39,0	1/1:25,39:64:36.90:233,37,0	1/1:26,41:67:43.79:335,44,0	1/1:6,7:13:14.97:157,15,0	0/1:5,12:17:7.69:281,0,8	0/1:9,11:20:45.64:270,0,46	1/1:14,22:36:25.47:216,25,0	0/1:12,13:25:0.48:1,0,0	0/0:28,0:28:78.21:0,78,1506	1/1:10,5:14:5.73:56,6,0	1/1:10,17:27:7.11:19,7,0	0/0:21,0:20:57.18:0,57,1189	0/1:28,11:39:99:293,0,140	1/1:11,17:27:12.04:427,12,0	1/1:4,2:6:2.57:33,3,0
chr10	13613706	.	A	ATGTGGCCTTGTTGGAGTGTG	47322.81	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=3.792;DP=751;FS=4.518;HRun=0;HaplotypeScore=302.2927;InbreedingCoeff=0.9501;MQ=64.23;MQ0=2;MQRankSum=-14.216;QD=89.80;ReadPosRankSum=-2.028;VQSLOD=3.9088;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:73,0:73:99:0,205,8613	1/1:3,0:3:5.95:111,6,0	0/0:32,0:25:60.15:0,60,1490	0/0:31,0:26:75.07:0,75,2275	1/1:5,10:22:20.96:1079,21,0	1/1:6,5:16:15.05:1130,15,0	1/1:24,0:24:59.94:2372,60,0	1/1:45,0:44:99:5060,120,0	1/1:9,11:27:30.10:2602,30,0	1/1:11,7:28:72.12:3481,72,0	1/1:7,10:23:29.93:2093,30,0	0/0:41,0:41:99:0,114,5195	1/1:7,9:19:30.10:2691,30,0	1/1:4,13:24:18.06:1535,18,0	1/1:7,10:23:29.95:2430,30,0	1/1:10,15:30:33.11:2259,33,0	1/1:9,10:32:27.09:2344,27,0	1/1:15,0:15:32.02:974,32,0	1/1:11,6:23:69.16:2907,69,0	1/1:3,15:20:29.97:2153,30,0	1/1:13,8:36:18.06:994,18,0	0/0:26,0:26:78.07:0,78,3545	1/1:8,14:28:27.09:2078,27,0	1/1:9,14:27:27.09:2123,27,0	0/0:21,0:20:60.21:0,60,2614	1/1:18,19:46:95.89:5804,96,0	1/1:12,0:12:35.87:906,36,0	1/1:3,0:3:6.02:195,6,0
chr10	13613722	.	GGA	G	882.16	PASS	AB=0.805;AC=7;AF=0.125;AN=56;BaseQRankSum=7.158;DP=589;FS=5.037;HRun=0;HaplotypeScore=178.5678;InbreedingCoeff=-0.1310;MQ=56.17;MQ0=3;MQRankSum=-6.947;QD=7.48;ReadPosRankSum=-0.942;VQSLOD=2.7147;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:65,0:65:99:0,193,3853	0/1:4,1:5:22.20:22,0,223	0/0:33,0:24:66.26:0,66,1264	0/0:31,0:26:75.17:0,75,1440	0/0:10,0:10:21.07:0,21,373	0/0:11,0:11:33.11:0,33,608	0/1:18,11:29:72.76:73,0,967	0/1:20,18:38:99:590,0,1024	0/0:15,0:15:42.14:0,42,778	0/0:20,0:20:60.14:0,60,1122	0/0:23,0:23:57.15:0,57,1023	0/0:39,0:39:99:0,114,2247	0/0:11,0:11:33.11:0,33,568	0/0:13,0:13:36.12:0,36,620	0/0:13,0:13:39.13:0,39,689	0/0:20,0:20:54.18:0,54,998	0/0:20,0:20:27.36:0,27,956	0/1:6,8:14:99:232,0,303	0/0:14,0:13:36.12:0,36,695	0/0:9,0:9:27.05:0,27,370	0/0:27,0:26:41.57:0,42,1182	0/0:26,0:26:78.25:0,78,1522	0/1:13,0:13:3.06:3,0,532	0/0:19,0:19:29.85:0,30,457	0/0:25,0:24:75.26:0,75,1504	0/0:27,0:27:78.27:0,78,1464	0/1:9,4:13:78.53:79,0,452	0/1:6,0:6:6.29:6,0,226
chr10	13613884	.	GTTAAATAC	G	23529.65	PASS	AC=42;AF=0.778;AN=54;BaseQRankSum=15.418;DP=586;FS=19.317;HRun=0;HaplotypeScore=192.1712;InbreedingCoeff=0.9909;MQ=50.96;MQ0=0;MQRankSum=-17.024;QD=59.57;ReadPosRankSum=-1.613;VQSLOD=2.6469;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,153,6352	1/1:1,5:6:12.04:344,12,0	0/0:22,0:16:36.12:0,36,1491	0/0:25,0:19:54.18:0,54,2017	1/1:0,25:25:57.13:1617,57,0	1/1:1,14:15:33.11:932,33,0	1/1:3,23:26:54.19:1547,54,0	1/1:3,13:16:39.10:982,39,0	1/1:2,18:20:48.16:1376,48,0	1/1:4,26:30:78.27:2190,78,0	1/1:2,14:16:33.11:945,33,0	0/0:32,0:32:93.32:0,93,4084	1/1:3,14:17:36.12:1030,36,0	1/1:2,13:15:39.13:1118,39,0	1/1:3,22:25:51.18:1437,51,0	1/1:0,16:16:36.12:1032,36,0	1/1:4,21:25:51.18:1462,51,0	1/1:3,11:14:24.05:623,24,0	1/1:3,14:17:36.07:905,36,0	1/1:2,15:17:36.09:967,36,0	1/1:3,24:27:45.11:1244,45,0	0/0:35,0:35:99:0,102,4363	1/1:1,15:16:32.91:945,33,0	1/1:1,21:22:17.55:515,18,0	0/0:21,0:21:63.22:0,63,2818	1/1:1,19:20:54.19:1546,54,0	1/1:0,10:10:27.09:774,27,0	./.
chr10	13615220	.	T	TG	10506.02	PASS	AB=0.526;AC=43;AF=0.768;AN=56;BaseQRankSum=-10.643;DP=441;FS=0.452;HRun=6;HaplotypeScore=40.2402;InbreedingCoeff=0.9083;MQ=90.86;MQ0=0;MQRankSum=-4.346;QD=31.84;ReadPosRankSum=1.989;VQSLOD=4.9255;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:96.15:0,96,958	1/1:0,6:6:18.06:226,18,0	0/0:21,0:21:47.87:0,48,457	0/0:16,0:16:39.06:0,39,388	1/1:2,10:12:33.10:400,33,0	1/1:1,6:7:15.05:189,15,0	1/1:2,13:15:36.12:453,36,0	1/1:2,24:26:66.13:795,66,0	1/1:0,13:13:39.06:471,39,0	1/1:0,13:13:39.12:491,39,0	1/1:2,5:7:15.05:189,15,0	0/0:17,0:17:51.12:0,51,520	1/1:1,12:13:33.11:415,33,0	0/1:1,9:10:6.33:240,0,6	1/1:1,17:18:51.16:642,51,0	1/1:1,17:18:42.09:511,42,0	1/1:1,33:34:90.29:1132,90,0	1/1:1,17:18:42.07:506,42,0	1/1:2,10:12:30.07:360,30,0	1/1:1,9:10:27.09:340,27,0	1/1:0,22:22:66.21:830,66,0	0/0:11,0:11:30.04:0,30,293	1/1:0,6:6:17.97:206,18,0	1/1:3,25:28:60.19:755,60,0	0/0:12,0:12:30.06:0,30,306	1/1:2,11:13:33.11:415,33,0	1/1:0,14:14:33.09:415,33,0	1/1:0,15:15:42.13:528,42,0
chr10	13615339	.	G	GATATATATAT	8787.92	PASS	AC=36;AF=0.750;AN=48;BaseQRankSum=4.059;DP=239;FS=2.480;HRun=0;HaplotypeScore=86.3478;InbreedingCoeff=0.5950;MQ=65.03;MQ0=4;MQRankSum=-8.116;QD=53.91;ReadPosRankSum=-3.665;VQSLOD=3.8497;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:45.14:0,45,1277	1/1:5,0:5:6.02:226,6,0	0/0:5,0:4:5.67:0,6,68	0/0:11,0:7:10.49:0,10,126	1/1:9,1:10:1.29:150,1,0	1/1:3,0:4:3.01:51,3,0	1/1:4,0:5:3.01:51,3,0	1/1:53,0:53:99:3694,105,0	1/1:2,1:3:6.02:192,6,0	./.	1/1:2,0:2:3.01:139,3,0	0/0:6,0:6:15.05:0,15,462	1/1:2,2:4:3.01:153,3,0	1/1:7,1:8:9.03:269,9,0	1/1:2,2:4:3.01:153,3,0	1/1:5,1:6:3.01:153,3,0	1/1:6,2:8:12.04:487,12,0	1/1:10,2:12:24.08:760,24,0	1/1:5,0:5:6.02:152,6,0	./.	./.	0/0:5,0:5:9.02:0,9,212	1/1:3,0:3:3.01:143,3,0	./.	0/0:15,0:15:39.13:0,39,1113	1/1:6,0:6:6.02:165,6,0	1/1:4,1:5:12.04:320,12,0	1/1:11,4:16:45.15:1530,45,0
chr10	13615351	.	TAATGA	T	1877.13	PASS	AB=0.927;AC=19;AF=0.396;AN=48;BaseQRankSum=0.970;DP=208;FS=0.646;HRun=0;HaplotypeScore=85.2654;InbreedingCoeff=-0.0159;MQ=74.83;MQ0=4;MQRankSum=-4.411;QD=15.77;ReadPosRankSum=-0.866;VQSLOD=2.9380;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:51.18:0,51,1535	0/1:3,0:3:31.69:50,0,32	0/0:11,0:8:6.90:0,7,164	0/0:17,0:12:25.19:0,25,246	0/0:6,0:6:8.78:0,9,140	0/1:6,0:6:51.59:52,0,141	1/1:1,0:1:3.01:54,3,0	0/1:35,13:49:99:808,0,1907	0/0:4,0:4:11.97:0,12,153	./.	1/1:0,1:1:3.01:43,3,0	0/0:5,0:5:15.05:0,15,469	1/1:1,0:1:3:27,3,0	0/1:3,0:3:12.32:90,0,12	0/0:1,0:1:2.98:0,3,22	0/0:3,0:3:3.01:0,3,67	0/1:9,0:8:28.70:29,0,246	0/1:10,2:12:99:216,0,307	1/1:0,1:2:6.02:101,6,0	./.	./.	0/0:4,0:4:12.04:0,12,384	1/1:0,1:1:3.01:50,3,0	./.	0/0:16,0:16:42.14:0,42,1223	0/1:3,1:4:59.08:59,0,90	0/1:5,0:5:75.92:76,0,105	0/1:19,2:20:99:372,0,301
chr10	13615352	.	A	AT	980.09	PASS	AB=0.904;AC=28;AF=0.583;AN=48;BaseQRankSum=5.274;DP=197;FS=2.180;HRun=1;HaplotypeScore=86.9162;InbreedingCoeff=0.2157;MQ=76.31;MQ0=4;MQRankSum=-6.423;QD=8.24;ReadPosRankSum=1.343;VQSLOD=1.1776;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:51.17:0,51,709	1/1:1,1:2:3.01:38,3,0	0/0:11,0:8:6.14:0,6,80	0/0:17,0:12:26.24:0,26,233	0/0:5,0:5:1.55:0,2,33	0/1:4,0:4:2.94:3,0,32	1/1:1,0:1:2.84:14,3,0	0/1:41,4:44:99:297,0,692	1/1:4,0:4:2.04:6,2,0	./.	1/1:1,0:1:3.01:44,3,0	0/0:5,0:5:15.05:0,15,210	1/1:1,0:1:2.04:6,2,0	1/1:3,1:4:8.06:89,8,0	1/1:1,0:1:2.04:6,2,0	1/1:2,0:2:2.04:6,2,0	0/1:8,1:8:4.40:4,0,34	0/1:10,2:11:56.22:156,0,56	1/1:2,0:2:5.94:45,6,0	./.	./.	0/0:4,0:4:12.04:0,12,166	1/1:1,0:1:3:28,3,0	./.	0/0:17,0:17:42.14:0,42,583	0/1:2,1:3:21.58:22,0,34	0/1:4,0:4:8.90:83,0,9	1/1:21,2:22:1.36:280,1,0
chr10	13615354	.	TGA	T	410.23	PASS	AB=0.853;AC=15;AF=0.313;AN=48;BaseQRankSum=2.717;DP=191;FS=0.000;HRun=0;HaplotypeScore=92.6631;InbreedingCoeff=0.0810;MQ=76.53;MQ0=4;MQRankSum=-4.101;QD=4.36;ReadPosRankSum=-0.382;VQSLOD=1.9020;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:54.17:0,54,1018	0/1:1,1:2:20.36:20,0,51	0/0:11,0:8:7.59:0,8,131	0/0:17,0:12:16.50:0,16,190	0/0:5,0:5:9.03:0,9,176	0/1:4,0:4:2.79:3,0,166	1/1:1,0:1:2.90:16,3,0	0/1:38,5:42:99:199,0,1221	0/0:4,0:4:12.04:0,12,206	./.	1/1:1,0:1:2.98:21,3,0	0/0:5,0:5:15.05:0,15,296	0/0:1,0:1:3.01:0,3,31	0/1:2,1:3:17.28:17,0,65	0/0:2,0:2:3.01:0,3,55	0/0:2,0:2:3.01:0,3,57	0/0:8,1:8:15.94:0,16,295	0/1:14,0:13:88.82:89,0,261	1/1:1,1:2:6.01:61,6,0	./.	./.	0/0:4,0:4:12.04:0,12,244	1/1:1,0:1:2.88:15,3,0	./.	0/0:14,0:14:42.13:0,42,775	0/1:2,1:3:20.96:21,0,55	0/0:2,0:2:6.02:0,6,117	0/1:18,2:19:87.85:88,0,452
chr10	13615360	.	TATAA	T	487.15	PASS	AB=0.883;AC=8;AF=0.167;AN=48;BaseQRankSum=1.817;DP=193;FS=0.731;HRun=0;HaplotypeScore=108.3469;InbreedingCoeff=-0.0122;MQ=75.55;MQ0=1;MQRankSum=-3.490;QD=5.80;ReadPosRankSum=-0.066;VQSLOD=2.3158;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:51.10:0,51,1075	0/1:2,0:2:3.36:3,0,58	0/0:12,0:8:13.14:0,13,132	0/0:19,0:13:10.13:0,10,185	0/0:5,0:5:9.03:0,9,199	0/0:5,0:5:12.88:0,13,260	0/0:1,0:1:2.80:0,3,13	0/1:33,11:44:99:424,0,1875	0/0:4,0:4:12.04:0,12,291	./.	1/1:0,1:1:3.01:32,3,0	0/0:4,0:4:12.04:0,12,316	0/0:1,0:1:2.37:0,2,8	0/1:3,0:3:0.26:0,0,83	0/0:2,0:2:6.02:0,6,90	0/0:2,0:2:5.99:0,6,101	0/0:9,0:9:8.39:0,8,389	0/1:11,1:13:41.76:42,0,406	0/0:3,0:3:1.28:0,1,4	./.	./.	0/0:4,0:4:12.04:0,12,324	0/1:1,1:2:33.31:33,0,48	./.	0/0:13,0:13:38.72:0,39,979	0/0:3,0:3:2.79:0,3,80	0/0:3,0:3:9.03:0,9,205	0/1:16,2:17:65.44:65,0,654
chr10	13615379	.	T	TATTTATAA	8702.14	PASS	AB=1.000;AC=40;AF=0.769;AN=52;BaseQRankSum=3.337;DP=224;FS=8.993;HRun=0;HaplotypeScore=125.5577;InbreedingCoeff=0.6294;MQ=64.16;MQ0=3;MQRankSum=-7.267;QD=51.49;ReadPosRankSum=-0.804;VQSLOD=4.0505;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:32.59:0,33,945	1/1:1,0:1:3.01:130,3,0	0/0:17,0:9:5.58:0,6,113	0/1:17,0:9:5.42:5,0,72	1/1:10,0:10:12.84:182,13,0	1/1:8,0:8:18.06:663,18,0	./.	1/1:17,8:34:20.85:1965,21,0	1/1:4,0:4:12.04:364,12,0	1/1:3,0:3:8.92:164,9,0	1/1:5,0:5:11.65:118,12,0	0/0:4,0:4:9.03:0,9,209	1/1:2,0:2:5.95:42,6,0	1/1:5,0:5:14.97:234,15,0	1/1:5,0:5:11.96:193,12,0	1/1:5,1:6:17.95:320,18,0	1/1:11,2:13:26.99:848,27,0	1/1:11,3:14:33.03:1104,33,0	1/1:4,0:3:5.99:113,6,0	1/1:3,0:3:8.99:100,9,0	./.	0/0:5,0:5:15.04:0,15,330	1/1:6,0:6:6.03:249,6,0	0/1:2,0:2:13.96:14,0,42	0/0:14,0:14:42.10:0,42,970	1/1:4,0:4:9.03:233,9,0	1/1:5,0:5:14.97:360,15,0	1/1:17,0:17:44.71:1298,45,0
chr10	13615386	.	AT	A	1097.56	PASS	AB=0.739;AC=16;AF=0.308;AN=52;BaseQRankSum=8.951;DP=189;FS=0.000;HRun=1;HaplotypeScore=95.9585;InbreedingCoeff=-0.1566;MQ=63.92;MQ0=4;MQRankSum=-6.625;QD=13.38;ReadPosRankSum=6.210;VQSLOD=2.5303;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:48.16:0,48,718	1/1:0,1:1:3.01:35,3,0	0/0:15,0:7:6.02:0,6,86	0/0:16,0:9:9.22:0,9,81	0/1:5,1:6:13.91:33,0,14	0/1:4,4:8:8.22:192,0,8	./.	0/0:13,0:12:26.11:0,26,191	1/1:0,3:3:9.01:99,9,0	0/1:2,1:3:17.09:17,0,65	0/0:4,0:4:11.97:0,12,103	0/0:7,0:7:21.07:0,21,296	0/0:2,0:2:6:0,6,56	0/1:3,1:4:26.66:27,0,68	0/1:3,1:4:25.15:25,0,73	0/1:4,2:6:65.58:66,0,79	0/1:6,4:10:4.74:189,0,5	0/1:5,5:10:31.67:153,0,32	0/0:4,0:3:3.01:0,3,42	0/0:3,0:3:9.01:0,9,95	./.	0/0:7,0:7:21.07:0,21,302	0/1:4,2:6:31.67:63,0,32	0/0:2,0:2:3.01:0,3,30	0/0:13,0:13:39.11:0,39,598	0/1:3,1:4:26.04:26,0,98	0/1:2,2:4:45:63,0,45	0/1:6,7:13:99:262,0,101
chr10	13615396	.	T	TA	1090.86	PASS	AB=0.811;AC=20;AF=0.385;AN=52;BaseQRankSum=8.540;DP=227;FS=0.000;HRun=0;HaplotypeScore=95.4853;InbreedingCoeff=0.0511;MQ=55.96;MQ0=4;MQRankSum=-6.928;QD=9.74;ReadPosRankSum=5.462;VQSLOD=3.5368;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:47.82:0,48,653	1/1:0,1:1:3.01:34,3,0	0/0:16,0:7:14.94:0,15,156	0/0:12,0:4:2.88:0,3,94	1/1:7,1:8:5.05:42,5,0	1/1:5,4:9:3.47:187,3,0	./.	0/0:9,0:8:5.44:0,5,151	1/1:0,3:3:9.03:108,9,0	0/1:5,1:6:17.89:18,0,34	0/1:5,0:5:1.09:1,0,32	0/0:7,0:7:21.07:0,21,294	0/0:4,0:4:5.84:0,6,35	0/1:6,1:7:27.74:29,0,28	0/1:3,1:4:26.42:29,0,26	0/1:4,2:6:47.11:47,0,48	1/1:6,4:10:11.56:198,12,0	0/1:3,5:8:53.79:140,0,54	0/0:10,0:9:2.98:0,3,22	0/0:7,0:7:4.58:0,5,40	./.	0/0:10,0:10:30.09:0,30,403	0/1:5,2:7:0.24:65,0,0	0/0:2,0:2:2.84:0,3,14	0/0:13,0:13:39.13:0,39,541	0/1:7,1:8:27.78:28,0,49	0/1:5,2:7:21.82:65,0,22	0/1:16,7:23:42.65:256,0,43
chr10	13615398	.	TGTGTGTGTGTGCGC	T	9814.61	PASS	AC=40;AF=0.769;AN=52;BaseQRankSum=9.101;DP=226;FS=7.726;HRun=0;HaplotypeScore=107.7458;InbreedingCoeff=0.7991;MQ=56.16;MQ0=4;MQRankSum=-7.622;QD=69.12;ReadPosRankSum=3.111;VQSLOD=3.9961;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:51.18:0,51,3329	1/1:1,0:1:3.01:72,3,0	0/0:16,0:7:12.04:0,12,499	0/0:12,0:4:11.97:0,12,387	1/1:2,6:8:6.02:232,6,0	1/1:4,5:9:21.07:825,21,0	./.	1/1:5,2:6:5.90:253,6,0	1/1:3,0:3:9.03:315,9,0	1/1:1,5:6:15.05:488,15,0	1/1:0,5:5:12.04:518,12,0	0/0:7,0:7:21.07:0,21,1460	1/1:0,4:4:6.02:259,6,0	1/1:1,6:7:12.04:497,12,0	1/1:1,3:4:12.04:497,12,0	1/1:3,3:6:15.05:628,15,0	1/1:6,4:10:21.07:815,21,0	1/1:8,0:8:14.88:532,15,0	1/1:2,8:9:21.06:378,21,0	1/1:0,7:7:9.03:389,9,0	./.	0/0:10,0:10:30.10:0,30,2041	1/1:2,5:7:12.04:470,12,0	1/1:1,1:2:3.01:129,3,0	0/0:13,0:13:39.13:0,39,2609	1/1:1,7:8:24.08:649,24,0	1/1:2,5:7:12.04:494,12,0	1/1:8,15:23:35.85:1375,36,0
chr10	13615406	.	TGTGCGC	T	5715.85	PASS	AC=42;AF=0.778;AN=54;BaseQRankSum=8.216;DP=254;FS=1.422;HRun=0;HaplotypeScore=96.3489;InbreedingCoeff=0.7613;MQ=55.48;MQ0=4;MQRankSum=-7.901;QD=34.85;ReadPosRankSum=-0.460;VQSLOD=4.3691;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:63.21:0,63,1797	1/1:1,1:2:3:25,3,0	0/0:14,0:7:18.04:0,18,279	0/0:13,0:5:1.01:0,1,101	1/1:7,1:8:6.02:114,6,0	1/1:5,4:9:21.07:421,21,0	1/1:3,0:3:3.01:36,3,0	1/1:16,0:15:45.15:660,45,0	1/1:2,3:5:9.03:194,9,0	1/1:5,1:6:15.05:254,15,0	1/1:5,0:5:12.04:198,12,0	0/0:9,0:9:27.09:0,27,827	1/1:4,0:4:6.02:99,6,0	1/1:6,1:7:12.04:212,12,0	1/1:9,1:10:27.09:456,27,0	1/1:5,2:7:15.05:268,15,0	1/1:6,4:10:21.07:425,21,0	1/1:4,5:9:20.39:318,20,0	1/1:9,0:9:21.06:298,21,0	1/1:7,0:7:9.03:149,9,0	./.	0/0:11,0:11:33.11:0,33,1025	1/1:5,2:7:12.04:230,12,0	1/1:2,0:2:3.01:49,3,0	0/0:13,0:13:36.12:0,36,1243	1/1:7,1:8:24.08:360,24,0	1/1:5,2:7:12.04:228,12,0	1/1:16,7:23:35.75:723,36,0
chr10	13615511	.	C	CTCTG	16750.72	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=5.936;DP=410;FS=18.602;HRun=0;HaplotypeScore=83.3492;InbreedingCoeff=0.9360;MQ=87.50;MQ0=0;MQRankSum=-9.594;QD=53.52;ReadPosRankSum=2.906;VQSLOD=4.1332;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:78.27:0,78,1418	1/1:0,3:3:9.03:235,9,0	0/0:21,0:21:60.19:0,60,1029	0/0:14,0:14:33.02:0,33,422	1/1:1,7:8:18.06:470,18,0	1/1:1,17:20:48.16:1256,48,0	1/1:3,17:20:48.16:1230,48,0	1/1:14,11:27:51.10:1114,51,0	1/1:2,12:14:30.10:782,30,0	1/1:6,7:14:27.08:654,27,0	1/1:1,7:8:18.06:470,18,0	0/0:20,0:20:54.16:0,54,923	1/1:1,12:13:36.12:942,36,0	1/1:1,9:11:27.09:706,27,0	1/1:2,11:14:30.10:784,30,0	1/1:3,8:11:27.09:706,27,0	1/1:3,20:25:54.19:1410,54,0	1/1:7,11:18:36.12:941,36,0	1/1:3,4:7:18.06:435,18,0	1/1:0,1:1:3.01:78,3,0	1/1:6,30:36:72.25:1864,72,0	0/0:6,0:6:12.04:0,12,218	1/1:3,5:8:15.05:390,15,0	1/1:3,14:17:27.09:707,27,0	0/0:9,0:9:24.08:0,24,436	1/1:2,5:7:18.06:400,18,0	1/1:4,9:13:21.07:548,21,0	1/1:11,7:18:24.08:627,24,0
chr10	13615665	.	TG	T	10875	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=15.244;DP=518;FS=5.900;HRun=6;HaplotypeScore=126.3631;InbreedingCoeff=0.9405;MQ=96.35;MQ0=0;MQRankSum=-7.383;QD=29.00;ReadPosRankSum=4.120;VQSLOD=3.6028;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,102,1309	1/1:0,8:8:21.05:225,21,0	0/0:25,0:25:60.18:0,60,769	0/0:28,0:28:75.18:0,75,926	1/1:1,3:4:3.01:32,3,0	1/1:1,29:30:87.22:935,87,0	1/1:2,18:20:45.11:484,45,0	1/1:4,15:19:45.08:472,45,0	1/1:1,12:13:36.09:387,36,0	1/1:0,10:10:30.08:322,30,0	1/1:0,3:3:9.02:97,9,0	0/0:33,0:33:93.30:0,93,1223	1/1:0,20:20:57.14:613,57,0	1/1:2,16:18:45.11:483,45,0	1/1:1,17:18:48.12:516,48,0	1/1:0,11:11:33.04:342,33,0	1/1:0,32:32:93.23:999,93,0	1/1:0,18:18:51.13:548,51,0	1/1:1,16:17:48.12:515,48,0	1/1:0,5:5:12.03:129,12,0	1/1:1,44:45:99:1322,123,0	0/0:13,0:13:39.11:0,39,493	1/1:0,6:6:12.03:129,12,0	1/1:1,25:26:72.18:774,72,0	0/0:8,0:8:21.06:0,21,263	1/1:1,16:17:48.12:516,48,0	1/1:1,13:13:39.06:406,39,0	1/1:0,21:21:60.11:631,60,0
chr10	13615983	.	G	GCCGC	13428.35	PASS	AC=42;AF=0.778;AN=54;BaseQRankSum=8.786;DP=438;FS=3.232;HRun=0;HaplotypeScore=105.8032;InbreedingCoeff=0.8871;MQ=75.37;MQ0=0;MQRankSum=-11.704;QD=42.36;ReadPosRankSum=0.606;VQSLOD=5.3576;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:96.24:0,96,1669	1/1:3,10:13:23.63:548,24,0	0/0:13,0:13:33.09:0,33,503	0/0:15,0:15:34.53:0,35,494	1/1:1,4:5:9.01:226,9,0	1/1:4,10:14:34.36:823,34,0	1/1:5,30:35:75.69:1835,76,0	1/1:6,4:11:14.27:197,14,0	1/1:2,7:10:21.07:450,21,0	1/1:5,6:11:16.49:596,16,0	1/1:3,1:4:2.94:18,3,0	0/0:33,0:33:90.27:0,90,1625	1/1:1,9:10:28.65:677,29,0	1/1:5,18:24:54.19:1308,54,0	1/1:2,5:9:15.05:378,15,0	1/1:0,13:14:24.04:547,24,0	1/1:17,14:31:60.28:1275,60,0	1/1:5,15:20:33.85:1043,34,0	1/1:6,7:14:33.07:634,33,0	1/1:2,1:3:3.01:75,3,0	1/1:30,16:46:48.21:1003,48,0	0/0:9,0:9:27.08:0,27,485	./.	1/1:5,16:21:25.81:620,26,0	0/0:13,0:13:33.10:0,33,557	1/1:4,8:12:28.96:700,29,0	1/1:1,5:7:15.03:326,15,0	1/1:1,1:3:6.02:151,6,0
chr10	13616837	.	TG	T	2120.47	PASS	AB=1.000;AC=37;AF=0.661;AN=56;BaseQRankSum=12.060;DP=700;FS=6.540;HRun=4;HaplotypeScore=145.9809;InbreedingCoeff=0.3941;MQ=86.43;MQ0=0;MQRankSum=-5.937;QD=4.02;ReadPosRankSum=7.007;VQSLOD=-0.5711;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,102,1281	0/1:8,0:8:23.82:24,0,28	0/0:41,1:35:24.19:0,24,576	0/0:44,2:41:35.32:0,35,770	1/1:28,0:27:7.16:118,7,0	1/1:24,0:23:1.29:88,1,0	1/1:20,0:20:38.05:105,38,0	0/1:39,0:39:58.93:105,0,59	1/1:21,0:21:12.44:94,12,0	1/1:26,0:26:25.48:127,25,0	0/1:19,0:19:24.58:102,0,25	0/0:21,0:21:57.17:0,57,778	1/1:21,0:21:42.91:139,43,0	1/1:20,0:20:36.75:118,37,0	0/1:22,0:22:37.64:46,0,38	1/1:34,0:34:61.60:187,62,0	0/1:32,0:32:16.64:82,0,17	1/1:40,0:40:31.85:167,32,0	0/1:31,0:31:56.82:67,0,57	1/1:24,0:24:31.84:160,32,0	1/1:17,1:18:9.72:88,10,0	0/0:17,0:17:45.09:0,45,574	1/1:6,0:6:12.66:48,13,0	1/1:23,0:23:15.70:80,16,0	0/0:11,0:11:30.08:0,30,392	0/1:20,0:20:10.65:67,0,11	1/1:31,0:31:61.41:191,61,0	1/1:19,1:20:15.03:113,15,0
chr10	13616841	.	GT	G	13492.89	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=7.037;DP=686;FS=6.930;HRun=7;HaplotypeScore=106.2636;InbreedingCoeff=0.9925;MQ=84.39;MQ0=0;MQRankSum=-5.384;QD=26.10;ReadPosRankSum=3.589;VQSLOD=4.7207;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:93.23:0,93,1113	1/1:2,6:8:18.04:183,18,0	0/0:39,0:34:19.89:0,20,487	0/0:45,0:40:18.80:0,19,682	1/1:4,23:26:69.16:703,69,0	1/1:1,21:22:63.14:642,63,0	1/1:0,20:20:60.14:612,60,0	1/1:4,32:36:96.18:968,96,0	1/1:1,20:21:54.12:550,54,0	1/1:1,25:26:72.15:727,72,0	1/1:3,15:18:45.09:456,45,0	0/0:20,0:20:57.16:0,57,691	1/1:0,23:23:60.14:611,60,0	1/1:0,21:21:54.12:550,54,0	1/1:3,17:20:45.10:459,45,0	1/1:0,34:34:87.20:887,87,0	1/1:3,27:30:75.17:765,75,0	1/1:2,38:40:99:1040,102,0	1/1:5,24:29:72.15:731,72,0	1/1:0,22:22:57.12:576,57,0	1/1:2,17:19:45.09:452,45,0	0/0:14,0:14:36.10:0,36,440	1/1:0,7:7:15.01:153,15,0	1/1:1,23:24:60.14:612,60,0	0/0:11,0:11:30.03:0,30,358	1/1:2,17:19:51.11:519,51,0	1/1:0,31:31:84.18:856,84,0	1/1:2,18:20:44.89:441,45,0
chr10	13617078	.	TTTTTG	T	11297.28	PASS	AB=0.630;AC=43;AF=0.768;AN=56;BaseQRankSum=10.793;DP=526;FS=5.377;HRun=0;HaplotypeScore=125.8348;InbreedingCoeff=0.8532;MQ=56.11;MQ0=16;MQRankSum=-9.634;QD=34.76;ReadPosRankSum=0.134;VQSLOD=4.4937;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,120,3249	1/1:2,4:6:12.04:224,12,0	0/0:37,0:13:7.66:0,8,257	0/0:65,0:23:8.74:0,9,282	1/1:4,11:15:24.04:412,24,0	1/1:8,5:13:27.09:479,27,0	1/1:5,12:17:30.10:560,30,0	0/1:12,17:28:73.23:773,0,73	1/1:6,9:15:33.07:580,33,0	1/1:6,8:13:30.10:513,30,0	1/1:2,9:11:27.09:485,27,0	0/0:20,0:20:42.14:0,42,1081	1/1:11,4:15:21.06:326,21,0	1/1:4,10:14:33.11:616,33,0	1/1:6,14:20:48.16:893,48,0	1/1:3,11:14:33.11:617,33,0	1/1:6,3:9:18.01:270,18,0	1/1:9,12:21:39.12:677,39,0	1/1:8,5:10:12.04:224,12,0	1/1:4,12:16:33.11:617,33,0	1/1:3,7:10:27.05:412,27,0	0/0:16,0:16:33.08:0,33,812	1/1:3,11:14:29.96:531,30,0	1/1:7,5:12:24.07:381,24,0	0/0:11,0:11:24.08:0,24,659	1/1:9,15:23:51.17:925,51,0	1/1:10,7:17:33.06:535,33,0	1/1:2,4:6:15.04:249,15,0
chr10	13617131	.	TG	T	1717.50	PASS	AB=0.985;AC=35;AF=0.625;AN=56;BaseQRankSum=5.767;DP=488;FS=4.999;HRun=3;HaplotypeScore=114.0264;InbreedingCoeff=0.3439;MQ=58.06;MQ0=3;MQRankSum=-3.226;QD=4.54;ReadPosRankSum=5.182;VQSLOD=0.5112;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:75.20:0,75,1026	0/1:4,0:4:7.41:27,0,7	0/1:32,1:16:1.04:1,0,335	0/0:39,0:25:41.01:0,41,568	1/1:7,2:9:15.09:113,15,0	0/1:15,2:16:3.04:98,0,3	0/1:18,0:18:1.95:57,0,2	0/1:23,0:23:47.80:48,0,65	1/1:16,0:16:2.89:96,3,0	1/1:14,0:14:0.47:66,0,0	0/0:6,0:6:12.86:0,13,80	0/0:24,0:24:72.20:0,72,978	1/1:14,1:15:37.52:185,38,0	1/1:16,1:17:28.40:121,28,0	1/1:26,0:26:39.92:188,40,0	1/1:18,0:18:10.13:107,10,0	0/1:25,0:25:15.51:85,0,16	1/1:25,0:25:0.98:76,1,0	0/1:13,0:12:10.43:10,0,31	1/1:5,1:6:14.04:81,14,0	1/1:18,1:19:10.45:112,10,0	0/0:9,0:9:24.06:0,24,324	0/1:5,0:5:1.81:2,0,35	1/1:19,0:19:16.04:98,16,0	0/0:5,0:5:12.04:0,12,171	0/1:21,0:21:30.41:67,0,30	1/1:28,0:26:57.69:196,58,0	1/1:7,0:7:17.55:67,18,0
chr10	13617134	.	GT	G	7897.01	PASS	AB=0.968;AC=45;AF=0.804;AN=56;BaseQRankSum=5.502;DP=486;FS=0.000;HRun=8;HaplotypeScore=89.8516;InbreedingCoeff=0.8291;MQ=59.57;MQ0=3;MQRankSum=-3.465;QD=20.84;ReadPosRankSum=2.744;VQSLOD=4.8305;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:75.17:0,75,850	1/1:1,3:4:9.01:87,9,0	0/1:29,1:14:3.73:4,0,168	0/0:39,0:25:38.44:0,38,391	1/1:4,4:8:20.93:181,21,0	1/1:5,12:16:36:335,36,0	1/1:5,12:17:39.06:376,39,0	1/1:6,18:24:54.03:506,54,0	1/1:2,14:16:42.06:405,42,0	1/1:2,12:14:39.06:376,39,0	1/1:5,1:6:3:29,3,0	0/0:26,0:26:75.22:0,75,886	1/1:1,14:15:44.94:419,45,0	1/1:2,17:19:45.02:423,45,0	1/1:2,26:28:72.11:694,72,0	1/1:2,18:20:48.07:463,48,0	1/1:3,21:24:53.20:595,53,0	1/1:3,22:25:50.78:492,51,0	1/1:4,7:10:7.07:134,7,0	1/1:1,4:5:15.02:143,15,0	1/1:3,15:18:36.04:343,36,0	0/0:10,0:10:27.02:0,27,288	1/1:3,2:5:6.01:58,6,0	1/1:1,17:18:42.07:405,42,0	0/0:4,0:4:12.04:0,12,145	1/1:3,18:21:48:447,48,0	1/1:0,27:27:81.13:781,81,0	1/1:0,7:7:21.03:202,21,0
chr10	13617264	.	GTACGCGA	G	12703.09	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=1.907;DP=337;FS=15.382;HRun=0;HaplotypeScore=143.1066;InbreedingCoeff=0.9162;MQ=55.26;MQ0=3;MQRankSum=-9.756;QD=54.52;ReadPosRankSum=0.583;VQSLOD=4.1703;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,117,3520	1/1:0,5:5:15.05:389,15,0	0/0:9,0:8:23.91:0,24,585	0/0:14,0:10:27.09:0,27,733	1/1:2,9:11:24.08:565,24,0	1/1:0,8:8:21.07:544,21,0	1/1:5,9:14:18.06:462,18,0	1/1:6,8:14:24.08:622,24,0	1/1:1,8:9:24.08:620,24,0	1/1:1,3:3:6.02:156,6,0	1/1:0,8:8:24.08:622,24,0	0/0:19,0:19:54.18:0,54,1663	1/1:1,8:9:17.81:466,18,0	1/1:2,7:9:24.08:616,24,0	1/1:2,12:13:33.11:849,33,0	1/1:1,11:12:30.10:773,30,0	1/1:3,7:10:12.04:294,12,0	1/1:2,10:12:33.08:799,33,0	1/1:2,4:6:12.04:278,12,0	1/1:1,16:17:48.16:1239,48,0	1/1:8,16:24:35.99:934,36,0	0/0:13,0:13:36.12:0,36,1067	1/1:1,12:12:33.11:855,33,0	1/1:4,5:9:12.04:286,12,0	0/0:8,0:8:24.08:0,24,761	1/1:3,12:14:33.10:790,33,0	1/1:1,8:9:18.06:466,18,0	1/1:0,1:1:3.01:78,3,0
chr10	13617402	.	G	GC	4504.28	PASS	AC=40;AF=0.769;AN=52;BaseQRankSum=4.978;DP=182;FS=3.487;HRun=2;HaplotypeScore=33.6999;InbreedingCoeff=0.8213;MQ=108.29;MQ0=0;MQRankSum=-7.078;QD=36.62;ReadPosRankSum=3.098;VQSLOD=4.7862;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:45.14:0,45,558	1/1:0,3:3:9.03:129,9,0	0/0:13,0:12:33.10:0,33,401	0/0:18,0:18:51.16:0,51,622	1/1:0,4:4:12.04:172,12,0	1/1:0,2:2:6.02:86,6,0	1/1:1,5:6:12:149,12,0	1/1:0,8:8:24.04:322,24,0	1/1:0,2:2:3.01:43,3,0	1/1:0,4:4:12.04:173,12,0	1/1:1,5:6:18.06:258,18,0	0/0:6,0:6:18.06:0,18,223	1/1:1,3:4:9.03:130,9,0	1/1:1,7:8:21.07:300,21,0	1/1:0,5:5:12.04:173,12,0	1/1:0,13:13:36.12:518,36,0	1/1:0,3:3:9.03:129,9,0	./.	1/1:1,5:6:15.05:216,15,0	1/1:0,2:2:3.01:43,3,0	1/1:0,18:18:39.13:561,39,0	0/0:4,0:4:12.04:0,12,149	1/1:1,6:7:15.05:215,15,0	1/1:0,4:4:12:149,12,0	0/0:3,0:3:9.02:0,9,100	1/1:0,7:7:21.04:264,21,0	1/1:0,11:11:33.11:473,33,0	./.
chr10	13617687	.	GT	G	7237.34	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=10.702;DP=427;FS=19.087;HRun=10;HaplotypeScore=102.9448;InbreedingCoeff=0.9784;MQ=72.63;MQ0=0;MQRankSum=-3.568;QD=20.80;ReadPosRankSum=1.895;VQSLOD=3.9184;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,2:27:52.14:0,52,795	1/1:0,6:6:15:130,15,0	0/0:12,0:13:20.05:0,20,218	0/0:12,0:11:18.49:0,18,191	1/1:0,18:18:47.79:402,48,0	1/1:2,19:21:56.99:492,57,0	1/1:1,13:14:32.99:284,33,0	1/1:8,20:28:62.82:525,63,0	1/1:2,13:15:29.69:324,30,0	1/1:2,11:13:32.99:283,33,0	1/1:2,12:14:35.99:311,36,0	0/0:15,0:15:42.11:0,42,465	1/1:2,13:15:38.99:336,39,0	1/1:3,17:20:50.94:440,51,0	1/1:1,16:17:41.99:362,42,0	1/1:1,13:13:38.99:336,39,0	1/1:6,22:28:60.62:503,61,0	1/1:8,14:22:44.96:383,45,0	1/1:5,15:20:44.98:387,45,0	1/1:1,9:10:26.95:226,27,0	1/1:3,6:9:17.99:155,18,0	0/0:4,0:4:12.03:0,12,133	1/1:2,4:6:12:104,12,0	1/1:2,10:12:26.03:213,26,0	0/0:8,0:8:24.06:0,24,259	1/1:1,14:15:38.73:336,39,0	1/1:2,20:22:59.03:499,59,0	1/1:0,9:9:24:207,24,0
chr10	13617829	.	A	AAGCG	17332.59	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=8.251;DP=391;FS=7.426;HRun=0;HaplotypeScore=77.7638;InbreedingCoeff=0.8877;MQ=76.30;MQ0=0;MQRankSum=-9.121;QD=61.03;ReadPosRankSum=2.918;VQSLOD=6.2761;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,123,2528	1/1:0,1:1:3.01:85,3,0	0/0:12,0:12:33.10:0,33,656	0/0:18,0:18:42.14:0,42,805	1/1:0,9:10:24:543,24,0	1/1:0,8:9:24.08:628,24,0	1/1:0,15:17:45.12:1190,45,0	1/1:1,14:23:66.12:1435,66,0	1/1:0,4:7:9.03:251,9,0	1/1:0,7:7:21.07:589,21,0	1/1:0,3:3:6.02:171,6,0	0/0:14,0:14:42.13:0,42,842	1/1:1,13:17:35.75:1007,36,0	1/1:0,14:14:36.12:1009,36,0	1/1:0,11:15:30.10:841,30,0	1/1:0,13:14:39.13:1019,39,0	1/1:0,28:32:71.99:1913,72,0	1/1:0,19:23:54.19:1489,54,0	1/1:2,11:16:39.08:888,39,0	1/1:0,2:2:6.02:169,6,0	1/1:0,25:25:47.46:1270,47,0	0/0:10,0:10:30.10:0,30,605	1/1:0,3:4:6.02:161,6,0	1/1:0,20:21:42.14:1172,42,0	0/0:12,0:12:36.12:0,36,755	1/1:0,8:8:24.08:665,24,0	1/1:1,6:9:15.05:420,15,0	1/1:1,5:6:15.05:419,15,0
chr10	13617977	.	TG	T	12035.96	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=6.009;DP=607;FS=11.529;HRun=3;HaplotypeScore=80.4781;InbreedingCoeff=0.9932;MQ=72.95;MQ0=6;MQRankSum=-2.334;QD=28.66;ReadPosRankSum=5.050;VQSLOD=3.4653;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:81.22:0,81,1072	1/1:0,10:10:30.09:370,30,0	0/0:58,0:31:49.15:0,49,531	0/0:42,0:29:21.09:0,21,348	1/1:0,28:28:66.20:788,66,0	1/1:0,21:21:45.14:553,45,0	1/1:0,7:7:15.05:184,15,0	1/1:3,28:31:84.17:960,84,0	1/1:1,13:14:30.09:370,30,0	1/1:0,18:18:51.16:627,51,0	1/1:1,33:34:90.04:1031,90,0	0/0:23,0:23:69.14:0,69,864	1/1:0,14:14:30.09:368,30,0	1/1:0,16:16:42.13:518,42,0	1/1:0,24:24:36.11:444,36,0	1/1:0,12:12:18.06:222,18,0	1/1:0,28:28:66.15:794,66,0	1/1:2,16:18:33.10:407,33,0	1/1:1,20:21:60.63:638,61,0	1/1:0,29:29:81.08:925,81,0	1/1:0,13:13:24.08:296,24,0	0/0:13,0:13:39.09:0,39,493	1/1:0,14:14:33.10:403,33,0	1/1:0,12:12:27.08:333,27,0	0/0:22,0:22:66.15:0,66,826	1/1:0,25:25:72.13:823,72,0	1/1:0,13:13:30.05:352,30,0	1/1:0,18:18:51.16:628,51,0
chr10	13618759	.	T	TCAGAGG	17667.98	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=10.903;DP=599;FS=31.241;HRun=0;HaplotypeScore=186.4942;InbreedingCoeff=0.9425;MQ=66.21;MQ0=0;MQRankSum=-13.301;QD=39.61;ReadPosRankSum=-1.652;VQSLOD=3.0280;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,120,2446	1/1:4,5:9:20.96:601,21,0	0/0:15,0:14:36.10:0,36,655	0/0:16,0:16:18.40:0,18,585	1/1:18,3:21:12.04:390,12,0	1/1:3,9:12:27.09:899,27,0	1/1:9,7:17:21:617,21,0	1/1:26,3:29:18.06:540,18,0	1/1:7,18:25:54.19:1797,54,0	1/1:15,7:22:33.11:1027,33,0	1/1:7,5:12:12.04:399,12,0	0/0:33,0:33:87.30:0,87,1845	1/1:10,9:21:27.09:869,27,0	1/1:10,12:22:42.06:1179,42,0	1/1:9,17:27:39.13:1298,39,0	1/1:19,10:30:33.11:978,33,0	1/1:12,11:23:24.97:801,25,0	1/1:8,4:12:17.98:440,18,0	1/1:12,6:19:27.08:715,27,0	1/1:7,8:16:12.04:399,12,0	1/1:20,3:25:9.03:300,9,0	0/0:21,0:21:45.15:0,45,961	1/1:10,5:16:12.04:399,12,0	1/1:11,7:18:15.05:499,15,0	0/0:21,0:21:45.15:0,45,949	1/1:18,11:30:54.17:1628,54,0	1/1:17,16:34:48.64:1596,49,0	1/1:2,3:6:9.03:300,9,0
chr10	13619133	.	T	TAGTTGG	1248.72	PASS	AB=0.792;AC=30;AF=0.938;AN=32;BaseQRankSum=-2.184;DP=41;FS=6.354;HRun=0;HaplotypeScore=15.5411;InbreedingCoeff=-0.1723;MQ=131.49;MQ0=0;MQRankSum=-1.038;QD=33.75;ReadPosRankSum=-0.680;VQSLOD=1.5911;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/1:4,1:6:38.28:276,0,38	0/1:4,0:5:15.69:217,0,16	./.	1/1:2,0:2:3.01:68,3,0	1/1:2,0:2:1.55:4,2,0	1/1:1,0:1:3:25,3,0	./.	1/1:1,0:1:2.99:23,3,0	1/1:1,0:1:3:25,3,0	./.	./.	./.	1/1:3,0:3:3:25,3,0	1/1:0,0:1:3.01:105,3,0	1/1:3,0:4:5.99:94,6,0	1/1:2,0:2:2.99:23,3,0	1/1:2,0:2:5.99:51,6,0	./.	1/1:2,0:2:5.99:50,6,0	1/1:0,0:1:3.01:90,3,0	1/1:1,0:2:6.02:170,6,0	1/1:2,0:2:6:91,6,0	./.	./.	./.	./.
chr10	13620491	.	C	CAG	27505.35	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=11.948;DP=878;FS=0.922;HRun=0;HaplotypeScore=161.7088;InbreedingCoeff=0.9991;MQ=87.22;MQ0=0;MQRankSum=-9.106;QD=42.91;ReadPosRankSum=6.156;VQSLOD=5.5704;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:78,0:78:99:0,229,3219	1/1:2,9:11:24.08:440,24,0	0/0:34,0:34:90.29:0,90,1258	0/0:34,0:34:41.82:0,42,1158	1/1:3,25:28:63.22:1149,63,0	1/1:0,19:20:51.17:934,51,0	1/1:1,26:27:54.19:989,54,0	1/1:3,24:28:75.20:1281,75,0	1/1:3,31:34:87.30:1594,87,0	1/1:5,26:31:81.16:1388,81,0	1/1:3,12:15:30.10:546,30,0	0/0:37,0:37:99:0,102,1441	1/1:4,31:36:78.27:1421,78,0	1/1:1,38:40:99:1976,108,0	1/1:0,28:29:66.23:1208,66,0	1/1:2,41:43:99:1924,105,0	1/1:4,34:38:90.31:1649,90,0	1/1:1,24:25:60.21:1100,60,0	1/1:5,12:19:42.08:674,42,0	1/1:0,23:23:48.16:875,48,0	1/1:2,52:55:99:2253,123,0	0/0:27,0:27:78.25:0,78,1098	1/1:1,22:23:51.17:926,51,0	1/1:1,36:37:87.06:1592,87,0	0/0:27,0:27:75.23:0,75,1054	1/1:2,36:39:99:1718,99,0	1/1:2,29:31:78.25:1428,78,0	1/1:0,8:8:24.08:440,24,0
chr10	13621103	.	AGTAG	A	14051.25	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=15.353;DP=530;FS=5.463;HRun=0;HaplotypeScore=142.4630;InbreedingCoeff=0.9204;MQ=77.65;MQ0=1;MQRankSum=-15.462;QD=36.03;ReadPosRankSum=3.223;VQSLOD=5.0690;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,138,3722	1/1:0,7:7:21.07:392,21,0	0/0:20,0:20:57.03:0,57,1479	0/0:17,0:17:42.14:0,42,1083	1/1:0,14:14:6.02:93,6,0	1/1:6,13:19:33.11:614,33,0	1/1:35,0:35:3.01:44,3,0	1/1:1,15:16:42.14:784,42,0	1/1:1,19:20:51.17:948,51,0	1/1:2,14:16:42.14:780,42,0	1/1:0,9:9:12.04:224,12,0	0/0:29,0:29:84.27:0,84,2271	1/1:0,12:12:36.12:671,36,0	1/1:2,24:26:69.24:1286,69,0	1/1:0,28:28:66.23:1230,66,0	1/1:2,17:19:39.13:727,39,0	1/1:1,17:18:39.13:705,39,0	1/1:3,13:16:33.11:614,33,0	1/1:3,15:18:42.14:784,42,0	1/1:1,7:8:12.04:205,12,0	1/1:3,14:17:24.08:432,24,0	0/0:12,0:12:36.12:0,36,990	1/1:1,7:8:9.02:168,9,0	1/1:3,17:20:20.46:391,20,0	0/0:16,0:16:48.16:0,48,1329	1/1:3,21:24:63.22:1175,63,0	1/1:1,21:22:60.21:1114,60,0	1/1:2,15:17:36.12:671,36,0
chr10	13621105	.	TAGGA	T	14106.55	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=15.278;DP=523;FS=6.243;HRun=0;HaplotypeScore=140.5250;InbreedingCoeff=0.9205;MQ=77.86;MQ0=1;MQRankSum=-15.412;QD=36.83;ReadPosRankSum=2.728;VQSLOD=4.9118;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,132,3606	1/1:7,0:7:21.07:392,21,0	0/0:20,0:20:54.19:0,54,1421	0/0:17,0:17:45.15:0,45,1157	1/1:14,0:14:6.02:93,6,0	1/1:19,0:19:36.12:655,36,0	1/1:5,30:35:3.01:58,3,0	1/1:16,0:16:42.14:784,42,0	1/1:20,0:20:51.17:948,51,0	1/1:15,0:15:42.14:780,42,0	1/1:9,0:9:12.04:224,12,0	0/0:30,0:30:87.30:0,87,2304	1/1:12,0:12:36.12:671,36,0	1/1:26,0:26:69.24:1286,69,0	1/1:28,0:28:66.23:1230,66,0	1/1:20,0:19:39.13:727,39,0	1/1:17,0:17:39.13:705,39,0	1/1:16,0:16:33.11:614,33,0	1/1:17,0:17:42.14:784,42,0	1/1:8,0:8:12.04:205,12,0	1/1:16,0:16:24.08:432,24,0	0/0:12,0:12:36.12:0,36,983	1/1:8,0:8:9.02:168,9,0	1/1:18,0:18:20.46:391,20,0	0/0:16,0:16:48.16:0,48,1314	1/1:23,0:23:63.22:1175,63,0	1/1:21,0:21:60.21:1114,60,0	1/1:17,0:17:36.12:671,36,0
chr10	13621929	.	T	TGGTCTACCTAGCAA	61935.11	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-5.429;DP=589;FS=8.153;HRun=0;HaplotypeScore=186.0898;InbreedingCoeff=0.9935;MQ=73.12;MQ0=0;MQRankSum=-15.341;QD=132.34;ReadPosRankSum=-0.333;VQSLOD=4.3368;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:84.29:0,84,3477	1/1:1,4:9:15.01:872,15,0	0/0:19,0:19:51.13:0,51,1483	0/0:24,0:24:57.69:0,58,1508	1/1:5,14:27:47.92:2341,48,0	1/1:2,18:25:60.21:4192,60,0	1/1:8,7:22:45.15:3129,45,0	1/1:42,0:42:99:5738,123,0	1/1:1,16:30:54.19:3803,54,0	1/1:6,11:22:60.16:3305,60,0	1/1:4,10:19:39.05:2004,39,0	0/0:24,0:24:69.22:0,69,2716	1/1:4,9:17:45.63:3005,46,0	1/1:3,15:26:54.19:3665,54,0	1/1:7,17:36:69.19:4636,69,0	1/1:3,16:30:57.67:3806,58,0	1/1:4,10:18:36.08:2254,36,0	1/1:1,7:10:24.04:1513,24,0	1/1:5,5:15:42.13:2279,42,0	1/1:2,9:16:39:2173,39,0	1/1:5,4:13:17.85:768,18,0	0/0:10,0:10:27.09:0,27,1160	1/1:2,10:17:36.04:1992,36,0	1/1:4,10:17:33.03:1844,33,0	0/0:15,0:15:39.60:0,40,1631	1/1:4,14:22:60.19:4010,60,0	1/1:3,14:27:45.80:3254,46,0	1/1:2,5:8:21.07:1351,21,0
chr10	13622238	.	T	TA	15081.82	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-1.185;DP=639;FS=0.365;HRun=6;HaplotypeScore=84.5023;InbreedingCoeff=0.9964;MQ=68.79;MQ0=0;MQRankSum=-1.930;QD=30.59;ReadPosRankSum=2.260;VQSLOD=5.2952;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,135,1366	1/1:0,6:6:18.06:226,18,0	0/0:21,0:21:45.77:0,46,467	0/0:17,0:14:34.93:0,35,319	1/1:2,23:25:62.95:769,63,0	1/1:3,16:19:48.15:603,48,0	1/1:2,25:28:69.22:865,69,0	1/1:8,33:41:99:1230,99,0	1/1:4,13:17:33.11:415,33,0	1/1:2,30:32:84.27:1056,84,0	1/1:2,18:20:48.15:604,48,0	0/0:30,0:30:84.16:0,84,842	1/1:4,14:18:30.10:377,30,0	1/1:3,22:25:66.21:826,66,0	1/1:5,11:16:33.11:415,33,0	1/1:1,20:21:54.13:662,54,0	1/1:2,27:29:72.23:906,72,0	1/1:5,25:30:78.23:966,78,0	1/1:2,16:18:48.15:604,48,0	1/1:0,21:21:60.19:749,60,0	1/1:3,20:23:54.17:679,54,0	0/0:8,0:8:18.04:0,18,184	1/1:1,16:17:39.12:490,39,0	1/1:3,17:20:42.13:528,42,0	0/0:22,0:22:63.13:0,63,635	1/1:4,24:28:72.21:891,72,0	1/1:1,24:25:60.19:755,60,0	1/1:0,14:14:39.08:466,39,0
chr10	13623630	.	GT	G	921.31	PASS	AB=0.985;AC=27;AF=0.482;AN=56;BaseQRankSum=6.335;DP=418;FS=2.691;HRun=5;HaplotypeScore=129.4817;InbreedingCoeff=-0.0536;MQ=67.69;MQ0=1;MQRankSum=8.506;QD=2.71;ReadPosRankSum=2.798;VQSLOD=-0.4307;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:75.18:0,75,957	1/1:5,0:5:8.37:46,8,0	0/0:10,0:7:18.85:0,19,178	0/1:13,0:9:1.99:2,0,40	0/1:24,0:24:21:34,0,21	0/1:14,0:13:18.89:43,0,19	0/1:4,1:4:7.43:11,0,7	0/1:23,1:24:22.54:124,0,23	0/1:7,0:7:0.63:30,0,1	0/1:21,0:21:33.04:41,0,33	1/1:12,1:13:14.64:113,15,0	0/0:7,0:7:21.06:0,21,272	0/1:18,0:18:17.98:59,0,18	0/1:9,0:8:4.85:9,0,5	0/1:17,1:18:22.30:51,0,22	1/1:16,0:15:0.70:73,1,0	0/1:14,0:14:0.50:52,0,0	0/1:19,0:19:2.23:28,0,2	1/1:19,0:18:13.04:99,13,0	0/1:25,0:25:15.90:100,0,16	1/1:5,0:5:8.43:50,8,0	0/0:2,0:2:6.02:0,6,82	0/0:9,0:9:1.93:0,2,20	0/1:5,0:5:2.80:5,0,3	0/0:24,0:24:69.19:0,69,895	0/1:26,0:26:2.05:48,0,2	0/1:31,0:31:30.33:54,0,30	0/1:9,0:9:0.50:6,0,1
chr10	13623634	.	T	TAAA	11292.40	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=8.533;DP=428;FS=2.469;HRun=0;HaplotypeScore=118.5759;InbreedingCoeff=0.9320;MQ=65.92;MQ0=0;MQRankSum=-7.100;QD=32.73;ReadPosRankSum=-0.058;VQSLOD=5.3694;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:78.20:0,78,1321	1/1:4,1:5:12.04:230,12,0	0/0:9,0:7:7.22:0,7,203	0/0:13,0:9:16.30:0,16,160	1/1:24,1:25:73.31:936,73,0	1/1:14,0:13:38.98:467,39,0	1/1:7,0:6:14.92:171,15,0	1/1:25,2:27:81.04:1001,81,0	1/1:8,0:7:21:294,21,0	1/1:24,0:24:66.52:840,67,0	1/1:13,0:13:33.01:430,33,0	0/0:7,0:7:21.07:0,21,391	1/1:16,1:17:41.82:466,42,0	1/1:10,0:9:18.01:231,18,0	1/1:17,1:18:50.92:684,51,0	1/1:15,1:15:41.99:575,42,0	1/1:14,0:14:29.98:352,30,0	1/1:19,0:19:27.03:338,27,0	1/1:18,0:17:35.80:517,36,0	1/1:25,0:24:62.89:770,63,0	1/1:5,0:5:11.96:173,12,0	0/0:2,0:2:6.02:0,6,112	1/1:6,2:8:23.94:355,24,0	1/1:5,0:5:12:161,12,0	0/0:25,0:25:69.21:0,69,1226	1/1:26,0:26:60.05:835,60,0	1/1:30,1:32:92.99:1184,93,0	1/1:9,0:9:23.72:284,24,0
chr10	13623638	.	A	AT	3499.35	PASS	AB=1.000;AC=45;AF=0.804;AN=56;BaseQRankSum=10.631;DP=414;FS=1.792;HRun=0;HaplotypeScore=129.1619;InbreedingCoeff=0.7930;MQ=68.47;MQ0=0;MQRankSum=-5.034;QD=10.08;ReadPosRankSum=1.080;VQSLOD=3.7507;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:72.22:0,72,974	1/1:5,0:5:7.69:42,8,0	0/0:9,0:7:14.15:0,14,183	0/1:16,0:12:2.63:3,0,53	1/1:23,1:24:55.34:307,55,0	1/1:14,0:13:29.08:133,29,0	1/1:6,2:7:13.36:102,13,0	1/1:22,3:25:55.33:301,55,0	1/1:7,0:6:14.94:99,15,0	1/1:22,2:24:40.16:327,40,0	1/1:10,0:10:21.27:109,21,0	0/0:8,0:8:24.07:0,24,320	1/1:14,1:15:19.02:110,19,0	1/1:10,0:9:12.95:66,13,0	1/1:18,0:18:32.21:163,32,0	1/1:13,1:13:25.40:169,25,0	1/1:12,0:12:15.93:81,16,0	1/1:19,0:19:19.19:93,19,0	1/1:16,0:15:24.17:128,24,0	1/1:22,1:22:44.77:271,45,0	1/1:6,0:6:7.11:38,7,0	0/0:2,0:2:6.02:0,6,84	1/1:9,0:9:0.29:90,0,0	1/1:5,0:5:9.54:49,10,0	0/0:23,0:23:66.22:0,66,922	1/1:26,1:27:48.30:302,48,0	1/1:30,1:31:65.79:347,66,0	1/1:6,3:9:21.80:170,22,0
chr10	13623641	.	AGAT	A	4912.17	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=11.222;DP=389;FS=4.012;HRun=0;HaplotypeScore=129.3331;InbreedingCoeff=0.8553;MQ=66.66;MQ0=0;MQRankSum=-5.328;QD=15.90;ReadPosRankSum=1.791;VQSLOD=4.2863;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:69.24:0,69,1628	1/1:3,0:3:5.98:54,6,0	0/0:6,0:6:6.14:0,6,318	0/0:14,0:11:26.59:0,27,394	1/1:24,0:24:45.32:403,45,0	1/1:12,0:11:22.70:166,23,0	1/1:8,0:7:9.34:91,9,0	1/1:19,0:19:44.59:213,45,0	1/1:6,1:6:12.39:102,12,0	1/1:24,1:25:48.72:571,49,0	1/1:10,0:10:18.29:163,18,0	0/0:9,0:9:27.09:0,27,621	1/1:13,1:14:18.98:125,19,0	1/1:8,1:8:15.67:148,16,0	1/1:16,0:16:24.76:214,25,0	1/1:13,0:12:27.59:249,28,0	1/1:11,0:11:12.91:125,13,0	1/1:17,1:18:21:194,21,0	1/1:13,3:15:32.16:358,32,0	1/1:21,0:20:33.98:260,34,0	1/1:5,0:5:3.01:31,3,0	0/0:2,0:2:6.01:0,6,97	1/1:8,0:8:13.39:136,13,0	1/1:5,0:5:8.04:87,8,0	0/0:23,0:23:66.23:0,66,1583	1/1:25,2:27:56.25:552,56,0	1/1:28,1:29:65.96:516,66,0	1/1:9,0:9:17.09:153,17,0
chr10	13623717	.	GAAAAACCAAA	G	729.13	PASS	AB=1.000;AC=25;AF=0.463;AN=54;BaseQRankSum=-0.844;DP=467;FS=24.580;HRun=0;HaplotypeScore=152.6171;InbreedingCoeff=0.2102;MQ=56.81;MQ0=38;MQRankSum=-1.874;QD=3.09;ReadPosRankSum=2.248;VQSLOD=0.7990;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:16:29.87:0,30,669	0/1:8,0:8:28.11:35,0,28	0/0:67,0:22:49.56:0,50,524	0/0:80,0:21:18.71:0,19,390	0/1:21,0:20:59.65:60,0,85	1/1:12,4:15:13.01:452,13,0	1/1:3,0:3:3.90:63,4,0	1/1:9,0:8:6.35:15,6,0	0/1:9,0:8:10.69:11,0,29	1/1:15,0:14:9.80:74,10,0	1/1:15,0:14:7.28:47,7,0	0/0:8,0:7:21.07:0,21,369	1/1:10,0:10:7.47:21,7,0	0/0:10,0:9:11.33:0,11,138	0/0:13,0:13:1.01:0,1,155	0/0:10,0:9:4.97:0,5,160	1/1:11,0:10:7.08:19,7,0	0/1:24,0:22:6.42:6,0,183	0/1:10,0:8:6.11:6,0,14	0/1:20,0:19:6.74:7,0,90	./.	0/0:4,0:3:6.02:0,6,138	0/1:13,0:13:12.81:13,0,13	0/0:2,0:2:5.14:0,5,25	0/0:19,0:18:42.11:0,42,905	0/1:19,0:17:5.32:5,0,124	0/1:17,0:16:48.80:49,0,88	1/1:16,0:9:5.44:18,5,0
chr10	13623768	.	A	AAG	4372.26	PASS	AB=0.886;AC=27;AF=0.500;AN=54;BaseQRankSum=2.283;DP=409;FS=7.835;HRun=0;HaplotypeScore=125.0151;InbreedingCoeff=-0.0170;MQ=41.57;MQ0=12;MQRankSum=-2.117;QD=13.49;ReadPosRankSum=8.193;VQSLOD=3.2610;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:13:35.89:0,36,465	0/1:4,0:4:50.47:50,0,53	0/0:12,0:3:4.26:0,4,49	0/0:17,0:5:6.90:0,7,80	0/1:25,2:23:82.90:177,0,83	0/0:16,0:16:5.29:0,5,146	0/1:9,0:7:6.63:17,0,7	1/1:12,14:21:13.15:515,13,0	0/1:9,1:10:40.35:143,0,40	0/1:10,3:12:11.94:224,0,12	0/1:14,3:16:5.42:291,0,5	0/0:5,0:4:9.03:0,9,138	1/1:9,3:12:18.81:228,19,0	0/1:9,1:9:46.23:46,0,142	0/1:10,3:13:99:198,0,125	0/1:18,4:19:79:309,0,79	0/1:12,4:13:3.05:111,0,3	0/1:18,3:19:99:102,0,132	0/1:20,4:21:35.48:320,0,35	0/1:19,2:18:76.34:285,0,76	./.	0/0:3,0:3:9.02:0,9,118	1/1:12,2:14:21.33:269,21,0	1/1:10,1:9:4.04:103,4,0	0/0:16,0:14:35.96:0,36,453	1/1:19,6:24:42.62:556,43,0	1/1:15,4:17:12.89:320,13,0	1/1:10,0:10:5.39:107,5,0
chr10	13623777	.	AG	A	889.72	PASS	AB=0.989;AC=30;AF=0.536;AN=56;BaseQRankSum=8.981;DP=379;FS=5.583;HRun=1;HaplotypeScore=115.6865;InbreedingCoeff=0.0653;MQ=50.21;MQ0=7;MQRankSum=-5.208;QD=2.93;ReadPosRankSum=4.873;VQSLOD=0.1183;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:13:7.02:0,7,311	1/1:4,0:4:7.03:23,7,0	0/0:16,1:8:2.46:0,2,103	0/0:17,0:5:11.72:0,12,161	0/1:25,0:22:18.74:71,0,19	1/1:14,0:12:9.32:46,9,0	1/1:8,0:6:10.64:55,11,0	0/1:23,0:18:37.19:37,0,158	0/1:10,0:9:4.66:28,0,5	0/1:10,0:9:18.56:29,0,19	0/1:15,0:15:4.59:56,0,5	0/0:5,0:5:12.03:0,12,151	1/1:13,0:13:9.16:66,9,0	0/1:8,0:6:6.24:6,0,32	0/1:9,0:9:10.98:11,0,26	0/1:18,2:18:19.58:80,0,20	1/1:14,1:13:20.28:76,20,0	0/1:20,1:19:30.03:97,0,30	0/1:24,0:18:34.50:34,0,119	1/1:16,1:15:7.69:86,8,0	0/0:2,0:2:2.50:0,2,9	0/0:5,0:5:15.04:0,15,192	1/1:14,0:14:4.96:56,5,0	0/1:11,0:8:2.22:43,0,2	0/0:15,0:14:2.37:0,2,386	0/1:18,0:18:4.07:46,0,4	1/1:16,0:15:9.53:61,10,0	1/1:9,0:9:15.42:51,15,0
chr10	13623778	.	GA	G	4506.01	PASS	AB=0.748;AC=38;AF=0.679;AN=56;BaseQRankSum=7.214;DP=381;FS=4.301;HRun=5;HaplotypeScore=104.2486;InbreedingCoeff=0.5313;MQ=50.17;MQ0=7;MQRankSum=-4.380;QD=13.99;ReadPosRankSum=5.081;VQSLOD=3.5974;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:13:26.98:0,27,345	1/1:1,3:4:9.01:84,9,0	0/1:17,0:8:0.97:1,0,155	0/0:17,0:5:12.03:0,12,147	1/1:8,17:22:35.97:326,36,0	1/1:5,9:12:27.05:266,27,0	1/1:3,5:6:12.02:122,12,0	0/1:13,10:18:9.52:207,0,10	1/1:1,9:9:23.50:194,23,0	1/1:3,7:10:6.27:183,6,0	1/1:5,9:14:26.05:254,26,0	0/0:6,0:6:12.04:0,12,164	1/1:7,7:14:23.81:193,24,0	0/1:4,4:6:21.42:46,0,21	0/1:6,3:9:0.07:101,0,0	1/1:11,9:18:30.67:306,31,0	1/1:9,6:13:26.45:210,26,0	0/1:14,8:20:5.10:242,0,5	0/1:10,13:17:31.14:237,0,31	1/1:5,12:15:33.74:299,34,0	0/0:2,0:2:2.50:0,2,9	0/0:5,0:5:15.05:0,15,205	1/1:2,12:14:29.78:303,30,0	1/1:4,7:8:14.80:139,15,0	0/0:15,0:14:33.62:0,34,452	1/1:7,12:19:39.66:342,40,0	1/1:8,8:15:30.45:270,30,0	1/1:2,7:9:20.98:180,21,0
chr10	13623784	.	GA	G	5460.29	PASS	AB=0.625;AC=37;AF=0.661;AN=56;BaseQRankSum=7.315;DP=394;FS=1.690;HRun=5;HaplotypeScore=105.8188;InbreedingCoeff=0.4072;MQ=56.01;MQ0=6;MQRankSum=-6.063;QD=17.39;ReadPosRankSum=4.408;VQSLOD=4.0657;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:15:38.88:0,39,450	1/1:0,6:6:12.02:125,12,0	0/0:18,0:10:17.06:0,17,292	0/0:15,1:6:12.04:0,12,159	1/1:4,17:20:47.89:446,48,0	1/1:0,12:10:27.06:283,27,0	1/1:2,6:7:10.50:97,11,0	0/1:11,11:18:99:255,0,101	1/1:2,11:12:20.47:260,20,0	1/1:4,8:12:32.95:316,33,0	0/1:3,12:15:17.37:258,0,17	0/0:8,0:8:18.05:0,18,236	1/1:4,9:13:23.47:189,23,0	0/1:6,5:9:16.86:133,0,17	0/1:5,4:9:51.21:135,0,51	0/1:8,13:20:25.23:276,0,25	1/1:6,7:12:26.68:229,27,0	1/1:8,10:18:29.84:286,30,0	0/1:8,16:18:35.43:349,0,35	1/1:3,13:15:6.56:301,7,0	1/1:3,0:3:3:26,3,0	0/0:6,0:6:18.06:0,18,251	0/1:3,12:15:4.19:301,0,4	1/1:2,10:9:17.06:160,17,0	0/0:15,0:14:33.11:0,33,462	1/1:7,17:24:36.79:480,37,0	1/1:9,8:17:36.83:360,37,0	1/1:2,7:9:21.01:192,21,0
chr10	13623793	.	G	GAAAA	13659.88	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=6.737;DP=381;FS=1.129;HRun=3;HaplotypeScore=95.6852;InbreedingCoeff=0.9430;MQ=69.98;MQ0=2;MQRankSum=-7.738;QD=44.79;ReadPosRankSum=1.561;VQSLOD=2.9859;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:36.11:0,36,663	1/1:6,0:6:15:252,15,0	0/0:24,0:18:29.66:0,30,540	0/0:9,0:6:14.99:0,15,216	1/1:20,1:20:54.01:954,54,0	1/1:15,0:13:36.09:620,36,0	1/1:5,0:4:9.03:154,9,0	1/1:17,0:17:51.09:808,51,0	1/1:13,0:12:33.10:618,33,0	1/1:14,2:15:45.13:838,45,0	1/1:14,1:15:39.11:740,39,0	0/0:9,0:9:24.06:0,24,417	1/1:10,3:13:24.08:500,24,0	1/1:9,0:8:21.02:337,21,0	1/1:8,2:10:23.98:408,24,0	1/1:17,2:18:45:758,45,0	1/1:10,3:12:30.06:561,30,0	1/1:16,1:17:42:555,42,0	1/1:19,1:15:39.13:893,39,0	1/1:15,1:15:39.09:763,39,0	1/1:0,3:3:3.01:49,3,0	0/0:7,0:7:21.06:0,21,400	1/1:14,1:15:45.13:840,45,0	1/1:12,0:9:21.05:357,21,0	0/0:14,0:14:39.11:0,39,731	1/1:21,5:26:66.16:1317,66,0	1/1:12,4:16:45.13:887,45,0	1/1:8,0:8:21.07:451,21,0
chr10	13624071	.	G	GC	10950.58	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=13.235;DP=585;FS=2.230;HRun=1;HaplotypeScore=112.8688;InbreedingCoeff=0.9687;MQ=43.80;MQ0=7;MQRankSum=-9.409;QD=26.91;ReadPosRankSum=1.612;VQSLOD=4.8612;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:48:99:0,129,1627	1/1:1,9:6:15.05:225,15,0	0/0:30,0:17:44.93:0,45,546	0/0:23,1:18:48.12:0,48,593	1/1:0,20:19:29.96:385,30,0	1/1:2,18:19:43.03:617,43,0	1/1:1,17:14:27.02:377,27,0	1/1:3,24:26:78.26:1153,78,0	1/1:1,23:23:51.12:736,51,0	1/1:2,15:16:45.15:674,45,0	1/1:3,22:18:30.06:423,30,0	0/0:40,0:40:99:0,111,1411	1/1:1,21:18:36.12:538,36,0	1/1:2,36:33:75.25:1121,75,0	1/1:4,23:23:38.96:577,39,0	1/1:3,26:18:33.11:493,33,0	1/1:1,8:6:12.04:180,12,0	1/1:2,7:8:18.06:266,18,0	1/1:4,12:13:39.09:544,39,0	1/1:1,19:14:24.08:359,24,0	1/1:0,6:6:12.04:180,12,0	0/0:18,0:18:51.17:0,51,660	1/1:0,13:13:33.04:466,33,0	1/1:1,6:7:9.03:135,9,0	0/0:16,0:16:39.13:0,39,506	1/1:0,24:19:54.18:808,54,0	1/1:3,14:15:30.07:425,30,0	1/1:2,6:7:18.06:269,18,0
chr10	13624397	.	C	CT	12491.37	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=13.167;DP=577;FS=1.350;HRun=3;HaplotypeScore=84.7434;InbreedingCoeff=0.9725;MQ=50.39;MQ0=5;MQRankSum=0.900;QD=28.01;ReadPosRankSum=2.593;VQSLOD=4.2061;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:78.23:0,78,926	1/1:1,10:8:18.06:252,18,0	0/0:31,0:24:59.97:0,60,657	0/0:17,0:13:39.11:0,39,453	1/1:0,19:16:39.09:524,39,0	1/1:1,18:17:36.12:504,36,0	1/1:1,13:10:21.07:293,21,0	1/1:2,20:13:26.99:332,27,0	1/1:1,12:10:27.09:378,27,0	1/1:0,26:24:69.23:955,69,0	1/1:1,20:15:39.13:545,39,0	0/0:19,0:19:48.15:0,48,576	1/1:1,10:9:24.08:336,24,0	1/1:0,19:15:36.12:504,36,0	1/1:0,18:14:36.05:480,36,0	1/1:0,27:27:66.22:920,66,0	1/1:0,17:14:30.10:420,30,0	1/1:0,25:25:60.20:840,60,0	1/1:2,29:22:66.20:888,66,0	1/1:1,25:21:57.19:793,57,0	1/1:1,3:4:6.02:84,6,0	0/0:16,0:16:39.12:0,39,468	1/1:2,30:32:69.23:965,69,0	1/1:0,9:7:15.05:210,15,0	0/0:22,0:22:57.16:0,57,663	1/1:1,36:28:75.25:1050,75,0	1/1:1,30:26:48.16:672,48,0	1/1:0,14:13:39.13:546,39,0
chr10	13626268	.	G	GTCTGGGACAGACA	66004.19	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-5.917;DP=659;FS=3.388;HRun=0;HaplotypeScore=225.8959;InbreedingCoeff=0.9847;MQ=75.09;MQ0=0;MQRankSum=-16.003;QD=126.20;ReadPosRankSum=2.144;VQSLOD=4.8935;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:96.28:0,96,3537	1/1:5,6:12:27.09:1350,27,0	0/0:23,0:23:58.40:0,58,1623	0/0:24,0:24:57.07:0,57,1706	1/1:16,8:28:27.09:1478,27,0	1/1:10,10:22:51.17:2516,51,0	1/1:12,15:27:69.24:4397,69,0	1/1:22,6:33:96.31:4809,96,0	1/1:13,17:31:69.24:3938,69,0	1/1:14,8:22:57.20:3431,57,0	1/1:9,5:14:8.16:544,8,0	0/0:18,0:18:51.18:0,51,1965	1/1:15,13:29:66.23:3755,66,0	1/1:10,9:20:54.18:3166,54,0	1/1:17,18:37:87.30:5243,87,0	1/1:14,15:30:72.25:4148,72,0	1/1:11,11:22:51.17:3133,51,0	1/1:8,7:16:45.11:2598,45,0	1/1:13,6:21:60.21:3160,60,0	1/1:8,9:18:27.09:1775,27,0	1/1:17,5:25:44.54:2183,45,0	0/0:24,0:24:69.24:0,69,2549	1/1:11,12:24:48.16:2687,48,0	1/1:4,11:19:24.08:1529,24,0	0/0:11,0:11:30.10:0,30,1199	1/1:18,11:32:84.29:4800,84,0	1/1:8,19:30:63.21:3905,63,0	1/1:6,5:11:27.09:1459,27,0
chr10	13629538	.	C	CA	7724.14	PASS	AB=0.712;AC=43;AF=0.768;AN=56;BaseQRankSum=-8.816;DP=510;FS=0.000;HRun=11;HaplotypeScore=48.5361;InbreedingCoeff=0.7143;MQ=55.84;MQ0=12;MQRankSum=0.866;QD=19.17;ReadPosRankSum=-0.317;VQSLOD=5.4269;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,1:35:65.16:0,65,688	1/1:1,6:7:15.03:152,15,0	0/0:14,0:10:8.03:0,8,85	0/0:12,0:6:0.70:0,1,37	1/1:0,13:15:35.23:390,35,0	1/1:1,15:17:50.90:490,51,0	1/1:1,11:12:30.06:305,30,0	1/1:4,15:18:39.08:396,39,0	0/1:2,8:10:2.19:162,0,2	1/1:6,18:24:54.11:548,54,0	1/1:4,9:15:35.74:331,36,0	0/0:17,0:17:38.81:0,39,302	1/1:4,10:14:22.29:217,22,0	1/1:5,14:19:35.81:347,36,0	1/1:3,13:17:30.06:303,30,0	1/1:1,6:7:18.04:183,18,0	1/1:4,36:39:78.15:792,78,0	1/1:4,22:25:47.91:463,48,0	0/1:11,12:23:4.45:305,0,4	1/1:7,18:23:50.97:502,51,0	1/1:5,8:11:20.87:191,21,0	0/1:11,1:12:3.51:4,0,158	1/1:3,16:19:38.67:376,39,0	1/1:3,15:18:39.08:396,39,0	0/0:26,0:25:68.71:0,69,530	1/1:3,13:16:36.07:366,36,0	1/1:8,8:16:24.02:234,24,0	1/1:4,10:11:27.05:272,27,0
chr10	13629621	.	T	TTG	2435.16	PASS	AB=0.948;AC=29;AF=0.580;AN=50;BaseQRankSum=-1.950;DP=653;FS=3.027;HRun=0;HaplotypeScore=109.0670;InbreedingCoeff=0.1814;MQ=61.65;MQ0=11;MQRankSum=1.991;QD=5.53;ReadPosRankSum=-0.699;VQSLOD=3.1803;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:33:32.60:0,33,294	1/1:9,2:11:8.62:99,9,0	./.	./.	1/1:16,1:23:11.97:117,12,0	1/1:14,0:14:5.99:49,6,0	0/1:17,1:19:34.63:77,0,35	./.	1/1:26,1:27:6.82:189,7,0	0/1:31,1:32:49.24:176,0,49	1/1:14,0:13:3.01:43,3,0	0/0:20,0:23:7.66:0,8,52	0/1:18,2:20:30.73:159,0,31	1/1:27,0:27:14.78:172,15,0	0/1:19,1:21:26.19:26,0,126	0/0:18,0:18:11.86:0,12,112	0/1:21,6:25:1.43:249,0,1	0/0:23,0:23:23.85:0,24,221	0/1:14,0:14:20.52:96,0,21	1/1:24,4:27:18.06:244,18,0	0/1:57,2:58:10.72:325,0,11	0/0:16,0:16:21.02:0,21,205	0/1:25,0:25:23.44:76,0,23	1/1:23,2:25:19.81:193,20,0	0/0:27,0:27:18.03:0,18,188	0/1:23,1:24:14.55:93,0,15	1/1:16,2:17:10.96:179,11,0	1/1:7,1:8:3.01:45,3,0
chr10	13630744	.	T	TTTTGTTG	29776.51	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-7.604;DP=638;FS=1.644;HRun=0;HaplotypeScore=130.9126;InbreedingCoeff=0.9857;MQ=64.80;MQ0=1;MQRankSum=-12.537;QD=62.42;ReadPosRankSum=0.817;VQSLOD=5.2094;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,129,3088	1/1:0,7:9:18.06:715,18,0	0/0:26,0:24:46.15:0,46,818	0/0:41,0:39:86.99:0,87,1519	1/1:7,15:26:54.12:1625,54,0	1/1:1,16:18:36.12:1434,36,0	1/1:2,11:17:14.49:1184,14,0	1/1:7,22:39:99:2438,114,0	1/1:2,22:26:51.09:1928,51,0	1/1:4,12:21:60.12:1555,60,0	1/1:2,12:19:42.01:1297,42,0	0/0:30,0:30:84.21:0,84,1857	1/1:1,21:24:54.19:2089,54,0	1/1:3,25:30:42.14:1528,42,0	1/1:6,18:27:39.13:1322,39,0	1/1:4,19:26:45.15:1726,45,0	1/1:5,13:23:24.08:791,24,0	1/1:2,15:18:30.10:1115,30,0	1/1:3,8:15:42.09:1023,42,0	1/1:1,9:13:26.89:706,27,0	1/1:2,21:28:33.07:950,33,0	0/0:6,0:6:18.02:0,18,337	1/1:5,10:15:30.10:873,30,0	1/1:2,13:20:27.01:969,27,0	0/0:13,0:13:39.10:0,39,890	1/1:2,24:32:84.19:2445,84,0	1/1:4,14:20:42.14:1664,42,0	1/1:3,5:10:12.04:399,12,0
chr10	13631083	.	G	GT	6676.31	PASS	AB=0.689;AC=36;AF=0.643;AN=56;BaseQRankSum=-6.725;DP=521;FS=4.935;HRun=10;HaplotypeScore=56.9230;InbreedingCoeff=0.4062;MQ=62.76;MQ0=11;MQRankSum=2.811;QD=15.42;ReadPosRankSum=1.018;VQSLOD=5.0543;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:21:54.68:0,55,464	1/1:0,3:3:6.02:64,6,0	0/1:46,0:14:14.82:15,0,62	0/1:50,0:19:4.17:4,0,44	0/1:10,17:27:1.17:451,0,1	0/0:13,0:13:29.95:0,30,246	0/0:16,0:17:43.98:0,44,351	1/1:4,16:20:48.08:499,48,0	1/1:1,5:5:6.02:64,6,0	1/1:4,20:22:13.57:520,14,0	1/1:0,10:10:30.07:314,30,0	0/0:12,0:11:20.95:0,21,172	1/1:0,8:8:15.04:160,15,0	1/1:1,6:7:21.05:223,21,0	1/1:2,14:16:8.57:294,9,0	0/1:2,10:12:3.57:171,0,4	1/1:5,29:35:38.17:593,38,0	1/1:5,24:29:19.12:593,19,0	0/1:7,12:20:4.38:334,0,4	0/1:4,12:16:10.23:301,0,10	1/1:6,6:10:15.04:160,15,0	0/0:13,1:14:3.30:0,3,220	1/1:3,15:19:38.93:397,39,0	1/1:2,18:20:36.56:526,37,0	0/0:10,0:10:26.01:0,26,203	1/1:1,22:23:60.13:629,60,0	0/1:8,13:20:30.53:309,0,31	0/1:2,4:6:15.62:55,0,16
chr10	13635141	.	C	CTT	3730.82	PASS	AB=0.568;AC=42;AF=0.750;AN=56;BaseQRankSum=6.287;DP=679;FS=0.406;HRun=12;HaplotypeScore=109.3550;InbreedingCoeff=0.7862;MQ=65.08;MQ0=0;MQRankSum=0.713;QD=6.78;ReadPosRankSum=0.062;VQSLOD=1.0142;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:39:88.62:0,89,810	1/1:2,0:8:9.98:35,10,0	0/0:15,0:13:13.94:0,14,108	0/0:10,0:8:14.58:0,15,101	1/1:8,0:34:13.97:208,14,0	1/1:1,22:23:54.15:736,54,0	1/1:4,14:20:32.97:398,33,0	1/1:8,0:28:26.73:188,27,0	1/1:5,0:28:11.14:120,11,0	1/1:12,0:37:14.24:162,14,0	1/1:4,0:20:34.93:121,35,0	0/0:16,0:16:45.05:0,45,415	1/1:6,1:28:15.41:152,15,0	1/1:6,0:23:30.45:128,30,0	1/1:4,0:32:39.93:138,40,0	1/1:8,0:28:17.66:119,18,0	0/1:7,0:24:23.05:43,0,23	1/1:6,1:25:39.50:167,39,0	1/1:6,0:14:22.26:87,22,0	1/1:13,0:41:14.34:189,14,0	1/1:6,0:16:17.47:61,17,0	0/0:26,0:26:65.27:0,65,575	1/1:6,0:21:22.09:93,22,0	1/1:5,0:28:17.66:119,18,0	0/0:22,0:22:41.87:0,42,377	1/1:7,0:28:51.36:190,51,0	0/1:5,0:26:6.61:111,0,7	1/1:1,1:17:33.46:166,33,0
chr10	13640256	.	A	ACC	670.05	PASS	AB=0.891;AC=19;AF=0.339;AN=56;BaseQRankSum=1.540;DP=440;FS=45.170;HRun=0;HaplotypeScore=81.5404;InbreedingCoeff=-0.4093;MQ=42.58;MQ0=27;MQRankSum=1.743;QD=2.11;ReadPosRankSum=1.065;VQSLOD=-0.7291;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:27:61.02:0,61,813	0/1:6,0:6:42.79:43,0,101	0/1:23,0:5:3.02:3,0,81	0/1:14,0:3:0.27:2,0,0	0/1:13,0:12:1.21:1,0,230	0/0:8,0:7:10.73:0,11,130	0/1:15,0:14:7.12:7,0,152	0/1:10,0:10:9.84:10,0,165	0/1:11,5:18:99:179,0,200	0/0:21,0:21:40.91:0,41,568	0/1:9,1:9:56.11:56,0,158	0/0:9,0:8:24.08:0,24,310	0/1:12,2:18:15.27:15,0,198	0/1:10,0:10:2.34:2,0,140	0/1:14,5:21:99:142,0,306	0/1:14,1:15:99:126,0,221	0/1:17,2:18:22.69:23,0,281	0/1:16,4:19:30.52:31,0,404	0/1:17,0:13:12.85:13,0,164	0/0:14,0:14:8.47:0,8,232	0/1:14,1:12:46.56:47,0,89	0/0:8,0:8:21.07:0,21,290	0/0:11,0:11:23.94:0,24,262	0/1:17,3:21:19.71:20,0,143	0/0:13,0:13:39.13:0,39,530	0/1:18,2:17:50.98:51,0,253	0/1:13,2:17:49.45:49,0,318	0/0:7,1:6:14.84:0,15,190
chr10	13641467	.	TG	T	2220.27	PASS	AB=0.942;AC=46;AF=0.821;AN=56;BaseQRankSum=2.411;DP=417;FS=23.992;HRun=12;HaplotypeScore=64.3459;InbreedingCoeff=0.1093;MQ=62.36;MQ0=1;MQRankSum=1.324;QD=5.66;ReadPosRankSum=5.498;VQSLOD=0.2451;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:17,0:16:29.70:30,0,56	1/1:8,1:9:10.96:72,11,0	0/1:11,0:9:14.11:14,0,29	0/1:7,0:7:15.55:16,0,24	1/1:6,2:9:4.99:29,5,0	1/1:7,0:12:11.06:31,11,0	1/1:15,0:33:41.45:133,41,0	0/0:9,1:10:2.94:0,3,29	1/1:9,7:16:23.87:184,24,0	1/1:16,5:21:10.72:75,11,0	1/1:6,0:6:2.97:23,3,0	0/1:23,0:23:34.24:34,0,44	1/1:12,2:14:15.81:115,16,0	1/1:11,2:17:18.84:98,19,0	1/1:6,4:11:16.94:121,17,0	0/1:14,6:22:10.81:187,0,11	1/1:11,9:20:11.05:214,11,0	1/1:13,4:20:23.46:155,23,0	1/1:7,0:7:8.61:63,9,0	1/1:7,0:7:2.97:23,3,0	1/1:24,8:34:44.69:305,45,0	0/1:10,1:11:11.23:11,0,73	1/1:7,1:8:10.94:90,11,0	1/1:11,6:18:25.86:184,26,0	0/0:15,0:15:7.85:0,8,124	1/1:19,0:20:4.66:17,5,0	1/1:7,1:7:10.46:72,10,0	1/1:6,3:9:10.92:71,11,0
chr10	13643607	.	GCTCTCTCTCTCT	G	93.82	PASS	AB=1.000;AC=9;AF=0.281;AN=32;BaseQRankSum=1.567;DP=453;FS=14.950;HRun=0;HaplotypeScore=127.4998;InbreedingCoeff=0.3921;MQ=60.30;MQ0=55;MQRankSum=0.224;QD=1.44;ReadPosRankSum=2.284;VQSLOD=1.9623;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:21:3.01:0,3,103	./.	./.	0/0:30,0:16:0:0,0,0	./.	0/0:18,0:17:0.47:0,0,1	0/0:9,0:9:3.01:0,3,78	0/0:23,0:20:0:0,0,0	./.	./.	./.	0/0:11,0:8:3.01:0,3,100	./.	0/1:6,0:6:0:0,0,0	./.	1/1:12,1:12:3.01:97,3,0	./.	1/1:19,0:16:3.01:48,3,0	0/0:19,0:15:2.04:0,2,6	./.	./.	0/0:22,0:20:11.96:0,12,179	./.	1/1:16,0:13:2.99:23,3,0	0/0:20,0:17:21.07:0,21,778	0/0:15,5:18:0:0,0,0	0/0:15,0:14:3.01:0,3,81	1/1:11,0:6:2.97:20,3,0
chr10	13643723	.	AGAGAGAGAGCGAGCGAGC	A	3192.98	PASS	AB=0.972;AC=31;AF=0.646;AN=48;BaseQRankSum=4.995;DP=264;FS=0.000;HRun=0;HaplotypeScore=79.1342;InbreedingCoeff=0.3374;MQ=30.22;MQ0=71;MQRankSum=-4.909;QD=19.35;ReadPosRankSum=0.608;VQSLOD=1.4839;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:16:20.61:0,21,1373	1/1:2,5:7:2.07:153,2,0	./.	./.	1/1:12,0:8:3.01:125,3,0	0/0:9,0:6:2.95:0,3,35	1/1:10,0:7:0.48:1,0,0	1/1:4,0:4:5.15:103,5,0	1/1:10,0:6:6.02:148,6,0	1/1:12,2:11:2.98:861,3,0	./.	0/0:7,0:6:12.50:0,13,802	1/1:11,0:10:12.04:437,12,0	1/1:5,1:6:3.01:111,3,0	./.	1/1:11,1:9:6.02:186,6,0	0/0:10,0:5:5.91:0,6,38	0/1:7,0:4:13.94:112,0,14	1/1:4,0:2:1.83:64,2,0	1/1:3,7:8:3.01:58,3,0	1/1:8,4:4:3.01:54,3,0	0/0:11,0:8:15.05:0,15,1207	0/0:2,3:5:0:0,0,0	1/1:8,1:7:0.46:1,0,0	0/0:12,0:9:7.68:0,8,836	0/1:10,1:9:3.81:503,0,4	0/1:13,0:10:5.87:313,0,6	1/1:13,0:1:3.01:103,3,0
chr10	13643725	.	AGAGAGAGCGAGCGAGC	A	3715.71	PASS	AC=34;AF=0.773;AN=44;BaseQRankSum=4.468;DP=249;FS=0.000;HRun=0;HaplotypeScore=75.0263;InbreedingCoeff=0.5136;MQ=31.17;MQ0=57;MQRankSum=-5.447;QD=24.77;ReadPosRankSum=-0.925;VQSLOD=1.6703;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:16:20.61:0,21,1222	1/1:7,0:7:2.55:122,3,0	./.	./.	1/1:9,1:8:3.01:138,3,0	0/0:9,0:6:2.93:0,3,22	1/1:10,0:7:0.52:2,1,0	1/1:5,0:4:5.56:128,6,0	1/1:9,0:6:6.02:216,6,0	1/1:7,6:10:20.94:880,21,0	./.	0/0:7,0:6:12.50:0,13,725	1/1:2,8:9:12.04:530,12,0	1/1:1,5:6:3.01:138,3,0	./.	1/1:5,7:9:6.02:174,6,0	./.	1/1:3,3:4:3.01:140,3,0	1/1:4,0:2:2.20:65,2,0	1/1:8,1:8:3.01:58,3,0	1/1:11,0:4:3.01:54,3,0	0/0:12,0:9:15.05:0,15,1083	./.	1/1:4,4:7:0.45:1,0,0	0/0:12,0:9:7.68:0,8,722	1/1:4,6:9:14.32:569,14,0	1/1:5,8:10:12.03:362,12,0	1/1:6,1:1:3.01:140,3,0
chr10	13643727	.	AGAGAGCGAGCGAGC	A	3188.55	PASS	AC=34;AF=0.773;AN=44;BaseQRankSum=4.643;DP=240;FS=0.000;HRun=0;HaplotypeScore=73.2194;InbreedingCoeff=0.5202;MQ=31.71;MQ0=52;MQRankSum=-5.986;QD=22.45;ReadPosRankSum=-1.213;VQSLOD=1.7977;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:16:20.80:0,21,1077	1/1:7,0:7:2.88:106,3,0	./.	./.	1/1:4,6:8:3.01:120,3,0	0/0:9,0:6:1.19:0,1,2	1/1:10,0:7:0.43:2,0,0	1/1:7,0:6:8.96:150,9,0	1/1:2,4:5:6.02:252,6,0	1/1:11,0:9:21.07:767,21,0	./.	0/0:7,0:6:12.03:0,12,649	1/1:10,0:9:12.04:432,12,0	1/1:6,0:6:3.01:120,3,0	./.	1/1:9,0:8:6.02:159,6,0	./.	1/1:6,0:4:3.01:118,3,0	1/1:4,0:2:2.84:65,3,0	1/1:9,0:8:3.01:58,3,0	1/1:11,0:4:3.01:54,3,0	0/0:12,0:9:15.05:0,15,957	./.	1/1:7,0:6:0.94:1,1,0	0/0:10,0:9:7.68:0,8,643	1/1:10,0:9:14.96:489,15,0	1/1:12,0:10:12.04:322,12,0	1/1:7,0:1:3.01:108,3,0
chr10	13643729	.	AGAGCGAGCGAGC	A	2773.55	PASS	AB=1.000;AC=35;AF=0.795;AN=44;BaseQRankSum=4.605;DP=216;FS=0.000;HRun=0;HaplotypeScore=67.3067;InbreedingCoeff=0.5204;MQ=32.57;MQ0=44;MQRankSum=-6.061;QD=20.85;ReadPosRankSum=-1.301;VQSLOD=1.5423;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:16:20.80:0,21,951	1/1:5,0:5:2.67:93,3,0	./.	./.	1/1:8,0:7:3.01:103,3,0	0/1:9,0:6:0:0,0,0	1/1:5,4:6:1.25:3,1,0	1/1:8,0:7:11.98:173,12,0	1/1:4,0:4:6.02:193,6,0	1/1:10,0:8:21.07:666,21,0	./.	0/0:7,0:6:11.97:0,12,571	1/1:9,0:8:12.04:362,12,0	1/1:6,0:6:3.01:103,3,0	./.	1/1:8,0:8:6.02:145,6,0	./.	1/1:5,0:3:3.01:97,3,0	1/1:4,0:2:3.01:66,3,0	1/1:9,0:8:3.01:58,3,0	1/1:10,0:4:3.01:54,3,0	0/0:12,0:9:15.05:0,15,845	./.	1/1:5,0:5:0.47:1,0,0	0/0:10,0:9:7.68:0,8,556	1/1:7,0:7:15:415,15,0	1/1:10,0:8:12.04:284,12,0	1/1:7,0:1:3.01:93,3,0
chr10	13643731	.	AGCGAGCGAGC	A	2389.76	PASS	AB=0.636;AC=35;AF=0.795;AN=44;BaseQRankSum=4.654;DP=212;FS=0.000;HRun=0;HaplotypeScore=65.7133;InbreedingCoeff=0.5235;MQ=32.63;MQ0=44;MQRankSum=-6.028;QD=18.10;ReadPosRankSum=-0.941;VQSLOD=1.8792;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:15:20.69:0,21,836	1/1:5,0:5:3.01:79,3,0	./.	./.	1/1:8,0:7:3.01:85,3,0	0/1:3,4:5:0:0,0,0	1/1:8,1:6:1.25:3,1,0	1/1:3,5:7:12.46:173,12,0	1/1:4,0:4:6.02:162,6,0	1/1:10,0:8:21.07:569,21,0	./.	0/0:7,0:6:11.63:0,12,510	1/1:9,0:8:12.04:300,12,0	1/1:6,0:6:3.01:86,3,0	./.	1/1:8,0:8:6.02:131,6,0	./.	1/1:5,0:3:3.01:80,3,0	1/1:4,0:2:3.48:66,3,0	1/1:9,0:8:3.01:58,3,0	1/1:12,0:4:3.01:54,3,0	0/0:12,0:9:15.05:0,15,755	./.	1/1:5,0:5:0.47:1,0,0	0/0:8,0:8:7.68:0,8,506	1/1:7,0:7:15.01:348,15,0	1/1:10,0:8:12.04:250,12,0	1/1:6,0:1:3.01:79,3,0
chr10	13644085	.	AGCGAGCGAGC	A	1491.25	PASS	AB=1.000;AC=33;AF=0.868;AN=38;BaseQRankSum=-1.209;DP=189;FS=0.000;HRun=0;HaplotypeScore=50.4700;InbreedingCoeff=0.3399;MQ=29.46;MQ0=25;MQRankSum=0.752;QD=12.03;ReadPosRankSum=-1.405;VQSLOD=0.8566;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	1/1:5,0:5:0.47:1,0,0	./.	./.	./.	1/1:4,0:4:0.89:2,1,0	1/1:6,0:5:2.27:54,2,0	1/1:2,0:1:3.01:63,3,0	0/1:5,0:5:0:0,0,0	1/1:2,10:11:21.06:343,21,0	./.	0/0:13,0:9:2.88:0,3,40	1/1:9,0:9:3.16:30,3,0	./.	1/1:15,0:15:3.01:54,3,0	1/1:9,0:6:6.49:108,6,0	1/1:4,0:2:6.02:114,6,0	1/1:2,0:1:3.01:59,3,0	1/1:4,6:8:13.31:179,13,0	./.	./.	1/1:6,0:4:0.47:1,0,0	./.	0/1:5,0:3:0:0,0,0	0/1:6,0:6:0:0,0,0	1/1:1,7:8:11.01:176,11,0	1/1:11,0:9:14.90:277,15,0	1/1:5,0:4:6.49:115,6,0
chr10	13645515	.	GAGTC	G	11159.21	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=9.263;DP=604;FS=0.499;HRun=0;HaplotypeScore=102.6308;InbreedingCoeff=0.9494;MQ=68.15;MQ0=4;MQRankSum=-1.305;QD=24.74;ReadPosRankSum=3.673;VQSLOD=4.6558;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:75.26:0,75,1777	1/1:1,5:6:8.99:116,9,0	0/0:34,0:26:15.99:0,16,449	0/0:37,0:26:19.24:0,19,419	1/1:5,5:10:15.05:241,15,0	1/1:5,10:15:30.10:482,30,0	1/1:11,14:25:33.11:530,33,0	1/1:13,10:23:30.10:478,30,0	1/1:7,11:17:27.09:434,27,0	1/1:7,12:19:36.12:572,36,0	1/1:4,5:9:15.05:241,15,0	0/0:18,0:18:42.14:0,42,1003	1/1:3,6:9:18.06:289,18,0	1/1:9,12:21:33.11:530,33,0	1/1:5,16:21:32.13:528,32,0	1/1:6,12:18:33.11:530,33,0	1/1:11,21:32:45.15:722,45,0	1/1:13,30:43:28.79:1199,29,0	1/1:16,5:19:15.03:217,15,0	1/1:4,9:13:21.07:337,21,0	1/1:6,23:29:63.21:1011,63,0	0/0:15,0:15:27.09:0,27,625	1/1:6,9:15:18.02:261,18,0	1/1:5,35:39:67.66:1105,68,0	0/0:13,0:13:30.10:0,30,673	1/1:12,13:25:39.13:621,39,0	1/1:13,13:26:39.13:625,39,0	1/1:10,3:13:6.02:92,6,0
chr10	13646754	.	G	GC	20239.22	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-12.486;DP=624;FS=0.809;HRun=0;HaplotypeScore=60.7125;InbreedingCoeff=0.9867;MQ=66.60;MQ0=0;MQRankSum=-3.910;QD=41.39;ReadPosRankSum=4.229;VQSLOD=5.3833;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:78.23:0,78,1041	1/1:0,5:5:15.05:239,15,0	0/0:19,0:19:54.15:0,54,710	0/0:20,0:19:48.90:0,49,689	1/1:1,9:10:18.06:287,18,0	1/1:0,14:14:36.12:575,36,0	1/1:2,30:32:72.25:1149,72,0	1/1:0,24:24:60.19:919,60,0	1/1:0,24:24:60.20:958,60,0	1/1:3,20:23:60.20:939,60,0	1/1:0,8:8:24.08:383,24,0	0/0:26,0:26:78.21:0,78,1066	1/1:0,34:34:84.29:1341,84,0	1/1:1,31:32:90.31:1436,90,0	1/1:1,29:30:84.29:1339,84,0	1/1:1,30:31:87.30:1378,87,0	1/1:0,33:33:96.33:1533,96,0	1/1:0,30:30:81.28:1294,81,0	1/1:0,16:16:45.14:696,45,0	1/1:0,11:11:30.10:479,30,0	1/1:1,40:41:99:1781,114,0	0/0:20,0:20:57.18:0,57,794	1/1:0,6:6:11.97:162,12,0	1/1:1,32:33:75.26:1198,75,0	0/0:18,0:18:42.12:0,42,557	1/1:0,17:17:45.15:718,45,0	1/1:0,28:27:72.25:1148,72,0	1/1:0,7:7:18.06:287,18,0
chr10	13648262	.	C	CACT	31499.99	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-14.192;DP=719;FS=8.199;HRun=0;HaplotypeScore=94.2529;InbreedingCoeff=0.9997;MQ=84.22;MQ0=0;MQRankSum=-7.078;QD=57.48;ReadPosRankSum=3.797;VQSLOD=6.6152;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,114,2001	1/1:2,11:14:33.11:778,33,0	0/0:32,0:32:87.27:0,87,1426	0/0:18,0:18:50.90:0,51,799	1/1:3,20:24:57.20:1346,57,0	1/1:2,25:28:69.24:1596,69,0	1/1:1,19:22:51.18:1204,51,0	1/1:5,32:38:99:2450,111,0	1/1:3,17:20:54.18:1219,54,0	1/1:2,31:34:99:2317,99,0	1/1:0,17:17:42.01:935,42,0	0/0:28,0:28:81.25:0,81,1367	1/1:2,24:28:75.26:1770,75,0	1/1:3,22:25:54.19:1275,54,0	1/1:2,31:36:84.29:1983,84,0	1/1:3,31:34:81.28:1914,81,0	1/1:5,27:32:78.23:1789,78,0	1/1:3,19:23:54.19:1276,54,0	1/1:5,20:25:63.22:1476,63,0	1/1:3,16:19:42.14:992,42,0	1/1:0,30:30:62.99:1488,63,0	0/0:37,0:37:99:0,105,1778	1/1:1,20:21:48.16:1134,48,0	1/1:2,21:23:45.15:1063,45,0	0/0:17,0:17:51.17:0,51,900	1/1:2,25:28:84.29:1937,84,0	1/1:2,14:17:39.13:921,39,0	1/1:0,9:9:27.09:638,27,0
chr10	13648502	.	AG	A	5410.29	PASS	AB=0.914;AC=48;AF=0.857;AN=56;BaseQRankSum=-1.912;DP=460;FS=7.196;HRun=11;HaplotypeScore=56.7123;InbreedingCoeff=0.1502;MQ=78.51;MQ0=0;MQRankSum=-2.272;QD=12.24;ReadPosRankSum=4.858;VQSLOD=4.1818;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:23,4:27:51.18:51,0,267	1/1:2,6:9:14:104,14,0	0/1:27,0:25:14.22:14,0,203	0/0:18,0:16:26.12:0,26,190	1/1:7,10:17:28.28:226,28,0	1/1:2,14:16:29.95:246,30,0	1/1:8,8:17:25.97:203,26,0	1/1:5,11:16:23.90:194,24,0	1/1:0,10:10:14.98:123,15,0	1/1:3,10:13:23.96:196,24,0	1/1:4,8:12:13.97:103,14,0	0/1:8,1:9:31.20:31,0,103	1/1:2,13:16:43.97:350,44,0	1/1:4,12:17:40.97:326,41,0	1/1:2,19:21:38.95:320,39,0	1/1:1,12:13:29.96:245,30,0	1/1:7,26:34:51.30:550,51,0	1/1:5,19:24:56.93:468,57,0	1/1:2,8:10:23.85:187,24,0	1/1:1,12:14:19.96:153,20,0	1/1:8,20:28:35.94:296,36,0	0/1:11,3:14:68.34:68,0,138	1/1:2,7:10:18.51:134,19,0	1/1:5,19:24:53.92:443,54,0	0/1:7,1:8:12.63:13,0,71	1/1:4,9:14:19.61:148,20,0	1/1:4,10:15:22.99:179,23,0	0/1:7,0:7:4.75:39,0,5
chr10	13649091	.	T	TTTCA	14213.38	PASS	AB=0.782;AC=42;AF=0.778;AN=54;BaseQRankSum=-9.844;DP=674;FS=5.502;HRun=0;HaplotypeScore=93.6335;InbreedingCoeff=0.7550;MQ=65.49;MQ0=1;MQRankSum=-0.822;QD=27.12;ReadPosRankSum=-2.829;VQSLOD=3.9074;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:72.23:0,72,1126	1/1:2,4:7:6.02:144,6,0	./.	0/0:23,0:21:18.04:0,18,248	1/1:7,12:21:24.08:430,24,0	1/1:10,20:30:48.16:1151,48,0	1/1:8,16:24:24.08:575,24,0	0/1:37,0:36:11.79:533,0,12	1/1:8,15:24:18.06:432,18,0	1/1:10,16:25:48.14:1033,48,0	1/1:5,12:17:36.12:621,36,0	0/0:29,0:29:42.14:0,42,671	1/1:4,14:19:27.09:646,27,0	1/1:5,15:20:30.10:719,30,0	1/1:9,14:23:21.07:493,21,0	1/1:7,17:24:36.12:863,36,0	1/1:10,14:24:27.09:647,27,0	1/1:7,13:19:30.10:718,30,0	1/1:14,6:20:24.08:558,24,0	1/1:6,4:11:12.04:248,12,0	1/1:21,15:37:27.09:642,27,0	0/0:18,0:18:36.11:0,36,548	1/1:13,8:24:9.50:174,10,0	1/1:11,23:35:27.09:647,27,0	0/0:23,0:23:51.17:0,51,794	1/1:10,14:27:51.17:1105,51,0	0/1:5,15:22:14.76:686,0,15	1/1:5,24:31:48.16:1149,48,0
chr10	13649369	.	GAAA	G	6135.22	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-10.111;DP=382;FS=12.077;HRun=13;HaplotypeScore=72.3369;InbreedingCoeff=0.8372;MQ=73.42;MQ0=4;MQRankSum=-2.819;QD=22.31;ReadPosRankSum=4.038;VQSLOD=2.4417;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:27:65.81:0,66,552	1/1:1,2:4:4.36:70,4,0	0/0:24,0:14:26.76:0,27,376	0/0:21,0:11:22.22:0,22,223	1/1:4,13:17:29.97:365,30,0	1/1:4,8:13:19.37:252,19,0	1/1:2,7:9:18.01:219,18,0	1/1:7,14:21:39.01:474,39,0	1/1:4,5:9:14.99:181,15,0	1/1:0,13:14:34.59:435,35,0	1/1:1,5:7:13.35:180,13,0	0/0:2,0:10:23.90:0,24,183	1/1:4,11:15:30.07:364,30,0	1/1:6,8:14:8.09:240,8,0	1/1:5,8:13:27:321,27,0	1/1:1,6:7:15.04:180,15,0	1/1:3,10:14:21.01:255,21,0	1/1:5,4:11:5.65:103,6,0	1/1:1,6:7:18.02:198,18,0	1/1:2,9:12:7.26:306,7,0	1/1:1,5:6:12.03:146,12,0	0/0:3,0:9:23.72:0,24,183	1/1:4,11:17:4.67:349,5,0	1/1:4,6:10:8.98:109,9,0	0/0:5,0:16:28.91:0,29,209	1/1:2,15:17:45.13:547,45,0	1/1:2,15:17:39.12:474,39,0	1/1:1,20:21:3.66:368,4,0
chr10	13651324	.	T	TG	1351.73	PASS	AB=0.971;AC=37;AF=0.661;AN=56;BaseQRankSum=0.717;DP=407;FS=26.352;HRun=0;HaplotypeScore=69.2969;InbreedingCoeff=0.2155;MQ=40.33;MQ0=55;MQRankSum=2.680;QD=4.63;ReadPosRankSum=2.719;VQSLOD=1.6370;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:30:85.95:0,86,673	1/1:2,0:2:5.91:38,6,0	1/1:32,0:2:1.25:3,1,0	0/0:36,0:3:2.84:0,3,15	0/1:15,0:11:1.42:49,0,1	1/1:4,2:4:11.93:98,12,0	1/1:5,3:7:12.26:128,12,0	1/1:13,0:12:17.01:88,17,0	0/1:4,0:5:10.41:33,0,10	1/1:18,0:17:15.87:151,16,0	1/1:10,0:10:1.52:67,2,0	0/0:17,0:16:43.05:0,43,278	0/1:8,0:8:11.39:29,0,11	1/1:8,1:8:5.69:52,6,0	0/1:13,0:11:22.09:55,0,22	0/1:9,0:9:12.53:52,0,13	0/1:24,0:18:25.71:42,0,26	1/1:11,0:8:7.76:25,8,0	0/1:21,0:13:22.91:120,0,23	1/1:9,0:8:15.02:89,15,0	1/1:12,0:12:9.01:77,9,0	0/0:5,0:5:11.94:0,12,93	1/1:8,0:8:6.25:65,6,0	1/1:11,0:10:2.90:29,3,0	0/0:21,0:20:50.54:0,51,420	1/1:15,1:12:23.32:166,23,0	0/1:18,0:16:7.26:68,0,7	0/1:11,0:4:0.55:1,0,9
chr10	13651343	.	GTTCTT	G	3005.13	PASS	AB=0.981;AC=29;AF=0.537;AN=54;BaseQRankSum=5.862;DP=502;FS=16.710;HRun=0;HaplotypeScore=100.6612;InbreedingCoeff=-0.0729;MQ=35.03;MQ0=68;MQRankSum=-0.434;QD=8.71;ReadPosRankSum=-3.994;VQSLOD=-0.0325;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:27:29.14:0,29,1011	./.	0/0:38,0:3:3.48:0,3,31	0/0:49,0:4:2.39:0,2,34	0/1:13,0:11:19.27:46,0,19	1/1:12,0:5:9.71:65,10,0	0/1:12,0:8:39.67:104,0,40	0/1:26,0:24:98.83:199,0,99	1/1:6,0:6:11.49:98,11,0	0/1:20,0:17:99:150,0,157	0/1:11,0:12:50.68:128,0,51	0/0:13,0:12:32.80:0,33,422	1/1:13,2:14:1.69:227,2,0	1/1:16,0:16:30:304,30,0	0/1:20,1:20:15.24:273,0,15	0/1:18,1:16:57.24:131,0,57	0/1:30,0:24:10.24:260,0,10	1/1:17,2:16:25.75:221,26,0	0/1:18,0:12:28.56:29,0,140	0/1:7,0:6:23.86:43,0,24	1/1:11,0:11:6.31:156,6,0	0/0:7,0:7:18.01:0,18,255	0/1:7,0:6:24.01:31,0,24	1/1:16,0:15:20.94:161,21,0	0/0:15,0:14:19.20:0,19,261	0/1:22,0:19:76.69:193,0,77	0/1:23,1:22:80.30:261,0,80	1/1:18,0:6:11.29:100,11,0
chr10	13652191	.	A	AG	1531.90	PASS	AB=0.798;AC=14;AF=0.250;AN=56;BaseQRankSum=1.788;DP=849;FS=3.459;HRun=0;HaplotypeScore=117.9023;InbreedingCoeff=-0.3355;MQ=71.57;MQ0=1;MQRankSum=-12.876;QD=3.49;ReadPosRankSum=-5.051;VQSLOD=1.7902;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,129,1782	0/1:8,4:12:99:111,0,260	0/0:18,0:18:47.17:0,47,609	0/0:22,0:22:19.47:0,19,496	0/1:12,5:17:57.19:57,0,436	0/0:33,7:40:40.36:0,40,1291	0/0:42,4:46:82.59:0,83,1641	0/0:30,3:32:9.14:0,9,884	0/1:32,15:47:99:264,0,1191	0/1:20,9:29:99:277,0,685	0/0:11,1:12:19.13:0,19,444	0/0:18,0:18:54.18:0,54,755	0/1:24,20:44:99:317,0,787	0/1:26,8:34:10.77:11,0,915	0/1:39,9:48:35.51:36,0,1365	0/1:39,11:50:13.52:14,0,1483	0/1:32,10:42:99:125,0,1210	0/1:21,7:28:70.69:71,0,594	0/1:28,1:28:60.09:60,0,857	0/0:16,2:18:30.12:0,30,589	0/0:53,6:58:84.37:0,84,1870	0/0:19,0:19:57.19:0,57,794	0/0:13,5:18:24.07:0,24,504	0/0:30,7:37:12.72:0,13,1095	0/0:26,0:26:78.26:0,78,1088	0/1:16,6:22:99:117,0,611	0/1:19,8:26:99:163,0,658	0/1:8,2:10:65.03:65,0,305
chr10	13652903	.	C	CCA	30158.23	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-15.000;DP=702;FS=0.339;HRun=0;HaplotypeScore=74.2224;InbreedingCoeff=0.9858;MQ=76.97;MQ0=1;MQRankSum=-1.877;QD=54.63;ReadPosRankSum=3.730;VQSLOD=5.6275;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,111,1777	1/1:1,9:11:30.06:540,30,0	0/0:9,0:9:27.06:0,27,394	0/0:18,0:18:42.61:0,43,660	1/1:0,8:9:23.77:473,24,0	1/1:0,13:13:36.12:731,36,0	1/1:1,34:36:96.33:1950,96,0	1/1:0,32:32:96.32:1895,96,0	1/1:0,32:32:90.31:1828,90,0	1/1:1,24:26:75.21:1448,75,0	1/1:0,10:12:33.11:638,33,0	0/0:46,0:46:99:0,138,2194	1/1:0,25:26:72.23:1462,72,0	1/1:1,36:37:99:2072,102,0	1/1:0,37:37:99:2011,99,0	1/1:0,25:26:66.23:1321,66,0	1/1:1,31:32:90.31:1828,90,0	1/1:0,35:35:96.33:1948,96,0	1/1:0,20:22:66.19:1285,66,0	1/1:0,5:8:9.03:183,9,0	1/1:1,47:50:99:2548,126,0	0/0:19,0:19:57.18:0,57,897	1/1:0,12:12:36.12:731,36,0	1/1:0,40:41:99:2193,108,0	0/0:21,0:21:60.20:0,60,970	1/1:0,30:31:93.26:1792,93,0	1/1:0,17:17:45.15:914,45,0	1/1:0,6:6:18.06:366,18,0
chr10	13657387	.	A	AT	24936.66	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-13.738;DP=746;FS=1.424;HRun=0;HaplotypeScore=68.2256;InbreedingCoeff=0.9934;MQ=78.62;MQ0=0;MQRankSum=-7.348;QD=43.67;ReadPosRankSum=3.792;VQSLOD=5.3048;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,141,1935	1/1:0,8:8:24.08:383,24,0	0/0:22,0:22:60.09:0,60,759	0/0:20,0:20:54.12:0,54,655	1/1:0,23:23:66.23:1055,66,0	1/1:0,21:21:63.21:1007,63,0	1/1:0,25:24:69.24:1102,69,0	1/1:1,25:26:75.22:1131,75,0	1/1:0,24:23:63.21:1006,63,0	1/1:0,32:32:96.27:1437,96,0	1/1:0,13:13:39.13:623,39,0	0/0:35,0:35:99:0,105,1433	1/1:0,29:28:78.27:1245,78,0	1/1:0,28:28:78.27:1245,78,0	1/1:0,38:38:99:1724,108,0	1/1:1,31:32:84.29:1341,84,0	1/1:0,29:29:78.27:1246,78,0	1/1:0,19:19:57.19:911,57,0	1/1:1,21:22:63.21:1007,63,0	1/1:0,22:22:60.20:957,60,0	1/1:1,54:55:99:2158,135,0	0/0:27,0:27:81.27:0,81,1132	1/1:0,24:24:66.23:1055,66,0	1/1:0,32:31:78.27:1246,78,0	0/0:22,0:22:66.22:0,66,922	1/1:0,36:35:99:1620,105,0	1/1:0,27:26:78.27:1245,78,0	1/1:0,6:6:12.04:192,12,0
chr10	13659106	.	T	TA	7096.04	PASS	AB=0.672;AC=41;AF=0.732;AN=56;BaseQRankSum=-9.310;DP=496;FS=10.193;HRun=11;HaplotypeScore=51.4001;InbreedingCoeff=0.5687;MQ=67.02;MQ0=0;MQRankSum=-1.090;QD=18.06;ReadPosRankSum=1.089;VQSLOD=5.4715;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,2:47:49.52:0,50,740	1/1:2,6:8:18.04:183,18,0	0/0:9,1:8:13.77:0,14,98	0/1:15,0:11:2.77:3,0,45	1/1:2,18:21:21.61:365,22,0	1/1:2,18:20:42.08:426,42,0	0/1:7,13:20:24.20:284,0,24	1/1:6,9:15:27.04:268,27,0	1/1:3,6:10:17.87:167,18,0	1/1:7,15:22:6.61:382,7,0	1/1:1,5:7:17.83:156,18,0	0/0:14,0:14:35.85:0,36,276	1/1:3,11:14:30.06:305,30,0	1/1:3,18:21:48.10:487,48,0	1/1:5,17:22:36.07:366,36,0	1/1:3,17:20:48.10:487,48,0	1/1:9,23:31:42.70:597,43,0	0/1:8,13:23:18.88:343,0,19	1/1:2,8:11:20.20:238,20,0	1/1:5,20:25:30.79:474,31,0	1/1:1,5:6:12.02:122,12,0	0/0:10,0:10:23.90:0,24,186	1/1:6,8:15:26.85:247,27,0	1/1:1,15:16:35.90:365,36,0	0/0:22,0:22:65.75:0,66,510	1/1:5,17:22:48.10:487,48,0	0/1:4,12:16:27.62:293,0,28	0/1:3,8:11:6.90:52,0,7
chr10	13659270	.	T	TA	14654.16	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-13.216;DP=635;FS=2.616;HRun=7;HaplotypeScore=57.3513;InbreedingCoeff=0.9861;MQ=69.61;MQ0=0;MQRankSum=-1.795;QD=29.72;ReadPosRankSum=2.310;VQSLOD=5.5095;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,156,1491	1/1:1,6:7:21.06:253,21,0	0/0:11,0:11:29.62:0,30,265	0/0:13,0:13:9.27:0,9,255	1/1:5,28:33:58.28:974,58,0	1/1:1,20:21:57.17:688,57,0	1/1:2,17:19:42.13:507,42,0	1/1:7,33:40:99:1150,99,0	1/1:2,11:13:18.44:381,18,0	1/1:4,29:33:87.27:1051,87,0	1/1:3,16:19:48.06:561,48,0	0/0:25,0:25:69.06:0,69,649	1/1:0,26:26:60.18:725,60,0	1/1:4,19:23:32.95:586,33,0	1/1:4,29:33:78.20:926,78,0	1/1:2,13:15:39.12:471,39,0	1/1:4,34:37:90.28:1087,90,0	1/1:3,13:15:33.10:399,33,0	1/1:3,13:16:39.12:471,39,0	1/1:2,25:27:75.15:874,75,0	1/1:6,22:28:60.18:725,60,0	0/0:17,0:17:42.04:0,42,397	1/1:0,17:17:48.15:580,48,0	1/1:1,20:22:63.04:726,63,0	0/0:22,0:22:54.06:0,54,516	1/1:1,17:18:51.16:616,51,0	1/1:1,14:15:33.10:399,33,0	1/1:1,13:14:42.13:506,42,0
chr10	13660940	.	GA	G	7595.98	PASS	AB=0.689;AC=42;AF=0.750;AN=56;BaseQRankSum=5.337;DP=558;FS=2.837;HRun=10;HaplotypeScore=72.1451;InbreedingCoeff=0.6566;MQ=63.24;MQ0=22;MQRankSum=0.261;QD=17.15;ReadPosRankSum=1.203;VQSLOD=5.5886;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:25:63.13:0,63,681	1/1:2,8:8:18:156,18,0	0/0:25,0:9:23.74:0,24,194	0/0:27,0:12:18.66:0,19,152	1/1:3,17:20:50.99:442,51,0	1/1:2,16:18:50.99:443,51,0	1/1:3,14:14:29.99:260,30,0	1/1:6,16:22:34.02:386,34,0	0/1:2,8:10:1.94:134,0,2	1/1:2,21:23:62.98:547,63,0	1/1:7,19:25:35.97:312,36,0	0/0:11,0:10:30.08:0,30,332	1/1:4,11:14:29.98:260,30,0	1/1:7,11:16:26.98:234,27,0	1/1:3,17:20:41.99:364,42,0	1/1:3,13:15:29.99:260,30,0	1/1:6,35:37:86.98:755,87,0	1/1:7,29:36:77.97:677,78,0	1/1:8,16:20:34.32:325,34,0	0/1:8,16:23:12.21:363,0,12	0/1:3,6:9:18.15:89,0,18	0/1:5,0:5:12.16:12,0,69	1/1:2,14:15:35.99:312,36,0	1/1:5,12:14:26.99:234,27,0	0/0:24,1:25:40.12:0,40,671	1/1:2,17:18:50.97:439,51,0	1/1:7,20:25:50.94:436,51,0	1/1:0,7:7:18:156,18,0
chr10	13667632	.	T	TTGGTGGTGG	4041.33	PASS	AC=38;AF=0.864;AN=44;BaseQRankSum=-0.993;DP=307;FS=1.761;HRun=0;HaplotypeScore=79.4605;InbreedingCoeff=0.4365;MQ=62.32;MQ0=9;MQRankSum=-2.542;QD=21.61;ReadPosRankSum=-0.229;VQSLOD=2.7088;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:20.79:0,21,414	1/1:3,0:3:0.89:2,1,0	./.	./.	./.	1/1:9,1:10:9.03:234,9,0	1/1:15,0:15:6.02:141,6,0	1/1:7,0:7:2.97:20,3,0	1/1:4,4:10:6.02:260,6,0	./.	1/1:4,0:4:5.96:44,6,0	./.	1/1:9,0:9:9.03:281,9,0	1/1:6,4:11:15.05:658,15,0	1/1:9,0:12:3.01:57,3,0	1/1:8,1:16:9.03:360,9,0	1/1:19,0:19:18.03:416,18,0	1/1:10,0:10:12.04:294,12,0	1/1:12,1:13:6.02:269,6,0	./.	1/1:13,0:10:6.02:172,6,0	0/0:5,0:5:3.01:0,3,80	1/1:4,0:4:3.01:118,3,0	1/1:10,0:10:3.01:32,3,0	0/0:14,0:14:6.02:0,6,163	1/1:3,2:5:6.02:261,6,0	1/1:6,6:15:9.03:396,9,0	1/1:1,0:1:3:26,3,0
chr10	13668219	.	G	GTT	13728.66	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-7.427;DP=591;FS=8.408;HRun=10;HaplotypeScore=78.5398;InbreedingCoeff=0.9772;MQ=72.43;MQ0=2;MQRankSum=-2.874;QD=29.91;ReadPosRankSum=-0.315;VQSLOD=4.5923;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:72.13:0,72,732	1/1:3,9:14:27.09:395,27,0	0/0:29,0:22:30.78:0,31,292	0/0:19,0:16:17.05:0,17,142	1/1:2,27:35:98.59:1264,99,0	1/1:2,11:15:32.08:420,32,0	1/1:1,9:11:27.08:388,27,0	1/1:10,20:30:63.19:913,63,0	1/1:1,13:14:30.06:422,30,0	1/1:1,21:24:56.68:813,57,0	1/1:2,16:18:35.09:666,35,0	0/0:15,0:16:28.16:0,28,411	1/1:9,9:18:39.11:541,39,0	1/1:1,10:12:21.06:297,21,0	1/1:4,15:20:32.08:420,32,0	1/1:6,25:33:59.17:824,59,0	1/1:7,33:44:92.80:1350,93,0	1/1:3,27:33:77.21:1068,77,0	1/1:7,12:20:41.63:582,42,0	1/1:6,25:31:75.15:1033,75,0	1/1:2,7:9:9.03:134,9,0	0/0:9,0:9:21.02:0,21,213	1/1:2,15:17:39.13:575,39,0	1/1:1,12:13:33.07:467,33,0	0/0:24,0:27:53.30:0,53,627	1/1:5,9:16:26.92:309,27,0	1/1:5,15:23:48.15:684,48,0	1/1:1,6:8:12.03:163,12,0
chr10	13668524	.	CCAAGG	C	21024.21	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=15.571;DP=591;FS=14.091;HRun=0;HaplotypeScore=124.3758;InbreedingCoeff=0.9506;MQ=73.69;MQ0=0;MQRankSum=-6.331;QD=56.21;ReadPosRankSum=5.006;VQSLOD=4.7756;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,138,4333	1/1:0,1:1:3.01:67,3,0	0/0:19,0:18:52.32:0,52,1368	0/0:15,0:15:41.74:0,42,1109	1/1:0,21:21:45.15:989,45,0	0/0:20,0:20:57.20:0,57,1841	0/0:35,0:35:99:0,105,3319	1/1:0,29:28:84.28:1768,84,0	1/1:1,25:26:60.21:1336,60,0	1/1:0,16:16:48.12:1004,48,0	1/1:1,7:8:18.06:400,18,0	0/0:35,0:35:99:0,105,3253	1/1:1,27:28:75.26:1668,75,0	1/1:0,16:16:48.16:1070,48,0	1/1:2,27:29:78.27:1739,78,0	1/1:0,23:23:66.23:1471,66,0	1/1:0,23:23:57.20:1271,57,0	1/1:0,17:17:48.16:1070,48,0	1/1:0,14:14:36.08:756,36,0	1/1:1,8:9:24.08:534,24,0	1/1:3,32:34:66.10:1471,66,0	0/0:23,0:23:66.23:0,66,2096	1/1:1,3:4:9.03:200,9,0	1/1:0,38:38:96.23:2140,96,0	0/0:24,0:24:72.25:0,72,2309	1/1:0,10:10:30.10:668,30,0	1/1:1,22:23:54.19:1201,54,0	1/1:0,4:4:9.03:201,9,0
chr10	13668686	.	CGAAG	C	2054.82	PASS	AC=8;AF=0.400;AN=20;BaseQRankSum=-3.860;DP=343;FS=27.725;HRun=0;HaplotypeScore=64.4851;InbreedingCoeff=0.6187;MQ=76.53;MQ0=3;MQRankSum=3.860;QD=16.98;ReadPosRankSum=-2.681;VQSLOD=0.9818;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:25,24:48:51.17:780,51,0	./.	./.	./.	./.	0/0:12,0:12:6.02:0,6,75	0/0:17,0:17:3.01:0,3,37	./.	0/0:7,0:7:3.01:0,3,38	./.	./.	1/1:15,22:37:54.18:826,54,0	./.	./.	0/0:13,0:13:3.01:0,3,36	./.	./.	./.	./.	./.	0/0:26,0:25:0:0,0,0	1/1:5,10:15:18.06:275,18,0	./.	./.	1/1:11,9:20:18.06:275,18,0	0/0:5,0:5:2.84:0,3,14	./.	./.
chr10	13676151	.	C	CT	5855.52	PASS	AB=0.693;AC=49;AF=0.875;AN=56;BaseQRankSum=-3.990;DP=585;FS=0.629;HRun=14;HaplotypeScore=81.6077;InbreedingCoeff=0.0496;MQ=70.88;MQ0=0;MQRankSum=-1.829;QD=10.42;ReadPosRankSum=0.705;VQSLOD=4.4621;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:16,33:50:0.74:477,1,0	1/1:3,8:11:15.47:132,15,0	0/0:23,0:16:15.51:0,16,76	0/1:18,0:14:27.79:28,0,33	1/1:5,14:19:22.64:309,23,0	1/1:3,17:20:19.72:297,20,0	0/1:7,3:12:11.69:137,0,12	0/1:11,18:30:17.36:334,0,17	1/1:4,13:17:26.99:237,27,0	1/1:8,12:22:43.35:341,43,0	1/1:5,11:16:20.95:177,21,0	0/1:5,15:20:27.82:147,0,28	1/1:7,9:16:15.17:126,15,0	1/1:8,10:20:7.56:177,8,0	0/1:6,15:23:9.08:163,0,9	1/1:5,19:24:25.72:350,26,0	1/1:9,18:28:29.84:252,30,0	1/1:11,19:30:3.49:248,3,0	1/1:3,15:18:21.78:325,22,0	1/1:9,10:20:4.59:153,5,0	1/1:7,9:16:15.88:131,16,0	1/1:6,10:17:10.68:210,11,0	1/1:6,7:14:1.14:111,1,0	1/1:5,5:10:6:53,6,0	1/1:8,11:20:10.55:202,11,0	1/1:6,13:20:10.45:191,10,0	1/1:9,23:33:34.58:407,35,0	1/1:6,10:16:1.73:139,2,0
chr10	13677034	.	C	CGAGGGAGA	60237.23	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-9.962;DP=745;FS=7.191;HRun=0;HaplotypeScore=165.3365;InbreedingCoeff=0.9952;MQ=74.52;MQ0=1;MQRankSum=-19.282;QD=109.13;ReadPosRankSum=0.280;VQSLOD=6.0004;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,132,3959	1/1:2,15:17:48.16:2169,48,0	0/0:30,0:30:84.27:0,84,2246	0/0:22,0:22:65.56:0,66,1683	1/1:7,9:17:21.54:957,22,0	1/1:6,21:30:75.26:3377,75,0	1/1:8,26:36:93.32:4128,93,0	1/1:12,8:23:69.22:2555,69,0	1/1:6,33:45:99:5262,117,0	1/1:10,12:25:72.25:2862,72,0	1/1:9,3:13:15.05:639,15,0	0/0:39,0:39:99:0,114,3319	1/1:3,28:37:99:4460,99,0	1/1:2,25:29:81.28:3682,81,0	1/1:15,31:50:99:5543,132,0	1/1:5,21:31:81.28:3649,81,0	1/1:1,16:20:45.15:2027,45,0	1/1:5,8:14:36.12:1664,36,0	1/1:2,13:19:57.16:2239,57,0	1/1:6,15:21:54.19:2443,54,0	1/1:4,15:25:39.38:1795,39,0	0/0:31,0:31:87.28:0,87,2533	1/1:5,11:17:36.12:1594,36,0	1/1:8,11:23:48.16:2096,48,0	0/0:26,0:26:75.26:0,75,2246	1/1:3,25:28:84.29:3786,84,0	1/1:5,14:23:54.14:2342,54,0	1/1:0,7:7:21.07:970,21,0
chr10	13677776	.	GTTTTT	G	9216.79	PASS	AB=0.649;AC=43;AF=0.768;AN=56;BaseQRankSum=2.558;DP=622;FS=3.088;HRun=18;HaplotypeScore=129.7423;InbreedingCoeff=0.8304;MQ=67.54;MQ0=7;MQRankSum=-3.125;QD=21.14;ReadPosRankSum=9.604;VQSLOD=1.3840;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:38:96.39:0,96,1854	1/1:3,5:9:14.85:199,15,0	0/0:47,0:18:33.30:0,33,363	0/0:39,0:18:18.26:0,18,350	1/1:7,19:28:53.20:719,53,0	1/1:4,21:25:51.04:722,51,0	1/1:4,10:16:26.39:328,26,0	0/1:11,13:24:3:423,0,3	1/1:4,15:20:30.56:461,31,0	1/1:12,7:18:21.69:308,22,0	1/1:10,9:20:8.24:342,8,0	0/0:28,0:30:57.16:0,57,1118	1/1:3,13:16:29.97:436,30,0	1/1:6,11:19:19.51:306,20,0	1/1:10,20:31:50.56:726,51,0	1/1:9,9:18:35.76:501,36,0	1/1:10,13:24:2.58:401,3,0	1/1:8,17:27:42.54:591,43,0	1/1:6,4:11:8.67:173,9,0	1/1:3,12:16:32.83:445,33,0	1/1:7,2:9:2.38:43,2,0	0/0:12,0:15:36.11:0,36,757	1/1:3,21:24:37.06:563,37,0	1/1:2,9:13:26.38:343,26,0	0/0:13,0:13:36.11:0,36,771	1/1:11,13:29:55.38:629,55,0	1/1:9,12:23:23.56:319,24,0	1/1:4,9:14:13.50:240,13,0
chr10	13680808	.	CTGG	C	759.71	PASS	AB=0.834;AC=9;AF=0.161;AN=56;BaseQRankSum=8.792;DP=568;FS=32.210;HRun=0;HaplotypeScore=126.2056;InbreedingCoeff=-0.1938;MQ=68.08;MQ0=0;MQRankSum=-8.383;QD=5.39;ReadPosRankSum=0.765;VQSLOD=1.3378;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:52.72:0,53,1559	0/1:6,1:7:36.26:36,0,236	0/0:13,0:12:11.85:0,12,506	0/0:18,0:17:41.95:0,42,780	0/1:14,4:17:99:115,0,535	0/1:14,2:16:58.98:59,0,783	0/0:32,1:32:87.30:0,87,2031	0/0:21,0:21:54.19:0,54,1225	0/1:24,4:28:99:120,0,1415	0/1:16,2:18:54.47:54,0,865	0/0:8,1:9:21.07:0,21,453	0/0:33,2:34:45.01:0,45,2019	0/0:13,0:13:36.12:0,36,825	0/0:36,0:36:96.33:0,96,2192	0/0:16,0:16:48.16:0,48,1101	0/0:20,2:20:57.20:0,57,1376	0/0:38,0:38:99:0,105,2433	0/0:25,0:25:72.25:0,72,1723	0/0:17,1:15:42.13:0,42,832	0/0:9,1:10:16.94:0,17,460	0/0:40,0:40:90.31:0,90,1996	0/1:12,2:14:68.07:68,0,567	0/1:6,5:11:99:221,0,341	0/0:23,0:23:66.23:0,66,1561	0/0:10,2:11:30.09:0,30,619	0/0:16,0:16:41.81:0,42,875	0/1:15,3:18:59.25:59,0,885	0/1:7,4:11:99:168,0,459
chr10	13683821	.	C	CA	13963.50	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-9.526;DP=457;FS=4.116;HRun=0;HaplotypeScore=49.8578;InbreedingCoeff=0.9966;MQ=95.80;MQ0=0;MQRankSum=-7.627;QD=42.83;ReadPosRankSum=4.802;VQSLOD=5.0783;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:81.22:0,81,1107	1/1:0,7:7:18.06:287,18,0	0/0:29,0:28:79.65:0,80,970	0/0:23,0:21:60.14:0,60,755	1/1:1,24:25:63.21:1005,63,0	1/1:0,21:21:57.19:909,57,0	1/1:0,16:16:42.14:670,42,0	1/1:0,19:19:54.17:837,54,0	1/1:0,11:11:30.10:479,30,0	1/1:1,17:18:54.16:798,54,0	1/1:0,14:14:39.13:608,39,0	0/0:20,0:20:60.19:0,60,817	1/1:0,11:11:30.10:467,30,0	1/1:0,9:9:27.09:430,27,0	1/1:0,14:14:39.13:622,39,0	1/1:0,24:24:69.24:1101,69,0	1/1:1,9:10:21.07:334,21,0	1/1:0,18:17:45.15:710,45,0	1/1:0,11:11:33.07:477,33,0	1/1:1,15:16:45.15:719,45,0	1/1:2,10:12:36.11:550,36,0	0/0:11,0:11:33.11:0,33,456	1/1:1,10:11:27.09:431,27,0	1/1:0,16:16:33.11:527,33,0	0/0:16,0:16:48.13:0,48,647	1/1:0,16:16:48.16:762,48,0	1/1:0,17:17:48.16:764,48,0	1/1:0,10:10:30.10:476,30,0
chr10	13683988	.	A	AG	13699.37	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=2.638;DP=571;FS=0.000;HRun=6;HaplotypeScore=88.2188;InbreedingCoeff=0.9802;MQ=68.01;MQ0=2;MQRankSum=-1.896;QD=30.99;ReadPosRankSum=0.911;VQSLOD=4.9446;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:39:99:0,113,1138	1/1:2,6:8:18.06:226,18,0	0/0:13,0:11:11.41:0,11,121	0/0:20,0:17:45.07:0,45,448	1/1:4,15:19:48.15:602,48,0	1/1:5,16:21:48.11:585,48,0	1/1:3,11:14:30.10:377,30,0	1/1:7,22:29:81.12:952,81,0	1/1:5,12:17:36.07:435,36,0	1/1:1,22:23:66.21:830,66,0	1/1:8,21:29:69.18:839,69,0	0/0:26,0:26:72.15:0,72,728	1/1:5,15:20:51.12:623,51,0	1/1:4,19:23:57.18:717,57,0	1/1:3,10:13:33.11:415,33,0	1/1:3,15:18:47.98:531,48,0	1/1:2,24:26:75.24:943,75,0	1/1:3,10:12:9.57:319,10,0	1/1:6,25:31:87.28:1091,87,0	1/1:5,20:25:60.19:755,60,0	1/1:4,22:26:63.20:792,63,0	0/0:22,0:22:57.13:0,57,581	1/1:3,18:21:54.17:668,54,0	1/1:3,15:18:39.08:473,39,0	0/0:9,0:9:27.06:0,27,275	1/1:3,15:18:48.11:586,48,0	1/1:1,10:11:30.10:375,30,0	1/1:4,14:19:45.14:565,45,0
chr10	13684059	.	C	CAGCA	30870.06	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-8.604;DP=645;FS=1.964;HRun=0;HaplotypeScore=98.9694;InbreedingCoeff=0.9967;MQ=56.08;MQ0=2;MQRankSum=-8.905;QD=65.13;ReadPosRankSum=0.839;VQSLOD=6.9882;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,123,2417	1/1:2,5:6:15.05:404,15,0	0/0:23,0:19:54.09:0,54,973	0/0:29,0:23:62.51:0,63,1171	1/1:3,16:20:41.77:726,42,0	1/1:4,13:17:51.08:1210,51,0	1/1:6,16:23:51.14:1290,51,0	1/1:4,18:21:60.15:1476,60,0	1/1:2,12:15:39.13:1051,39,0	1/1:6,11:18:51.17:1310,51,0	1/1:5,14:18:44.98:1017,45,0	0/0:32,0:32:96.33:0,96,1903	1/1:5,15:20:57.20:1558,57,0	1/1:1,17:19:48.16:1341,48,0	1/1:0,31:31:90.31:2514,90,0	1/1:1,28:31:81.28:2232,81,0	1/1:6,29:36:92.19:2496,92,0	1/1:4,23:26:72.25:2013,72,0	1/1:3,12:18:54.13:1268,54,0	1/1:6,16:23:63.09:1351,63,0	1/1:3,16:18:48.10:1265,48,0	0/0:30,0:30:90.27:0,90,1692	1/1:4,18:22:57.18:1195,57,0	1/1:4,17:21:39.12:1013,39,0	0/0:16,0:16:39.13:0,39,778	1/1:3,17:21:63.22:1671,63,0	1/1:1,17:18:54.19:1473,54,0	1/1:4,18:21:36.12:997,36,0
chr10	13684873	.	T	TACAG	11449.50	PASS	AC=38;AF=0.864;AN=44;BaseQRankSum=-5.228;DP=351;FS=8.048;HRun=0;HaplotypeScore=33.7600;InbreedingCoeff=0.7738;MQ=33.89;MQ0=76;MQRankSum=-2.882;QD=42.09;ReadPosRankSum=-0.053;VQSLOD=3.2819;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:19:42.06:0,42,701	./.	./.	./.	./.	1/1:1,13:11:12.04:319,12,0	1/1:1,12:12:21.07:558,21,0	1/1:7,21:25:69.19:1625,69,0	1/1:0,20:17:21.07:558,21,0	1/1:0,5:3:9.03:240,9,0	./.	0/0:14,0:13:18.03:0,18,301	1/1:2,19:20:36.12:945,36,0	1/1:1,16:15:24.08:638,24,0	1/1:1,11:13:24.08:638,24,0	1/1:3,9:12:23.94:628,24,0	1/1:1,18:15:33.11:878,33,0	1/1:2,20:19:30.10:790,30,0	1/1:1,9:10:27.09:719,27,0	1/1:1,5:3:3.01:80,3,0	1/1:4,10:12:21.07:559,21,0	0/0:2,0:2:3.01:0,3,56	1/1:0,4:3:6.02:159,6,0	1/1:3,5:8:12.04:307,12,0	./.	1/1:2,12:12:33.11:851,33,0	1/1:1,15:10:27.09:719,27,0	1/1:0,8:4:9.03:240,9,0
chr10	13685707	.	T	TACAG	2641.68	PASS	AC=20;AF=0.769;AN=26;BaseQRankSum=-2.064;DP=145;FS=0.000;HRun=0;HaplotypeScore=26.5367;InbreedingCoeff=0.6056;MQ=21.92;MQ0=65;MQRankSum=-0.972;QD=32.22;ReadPosRankSum=-0.306;VQSLOD=2.9716;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:1:3.01:0,3,56	1/1:0,3:3:9.03:239,9,0	./.	./.	1/1:1,8:10:15.05:397,15,0	./.	./.	./.	./.	1/1:3,3:6:18.06:388,18,0	1/1:2,4:3:3.01:80,3,0	./.	./.	./.	./.	./.	1/1:0,5:1:3.01:80,3,0	./.	./.	1/1:2,16:11:30.10:797,30,0	./.	0/0:12,0:10:15.05:0,15,280	1/1:5,12:9:15.05:377,15,0	./.	0/0:9,0:7:12.04:0,12,224	1/1:0,6:3:9.03:240,9,0	1/1:1,4:1:3.01:79,3,0	1/1:2,3:2:3.01:76,3,0
chr10	13686525	.	GC	G	15322.85	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=6.543;DP=697;FS=20.441;HRun=6;HaplotypeScore=73.3454;InbreedingCoeff=0.9971;MQ=86.78;MQ0=0;MQRankSum=-6.153;QD=29.08;ReadPosRankSum=3.280;VQSLOD=3.2397;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,117,1507	1/1:0,7:7:21.05:226,21,0	0/0:24,0:24:60.02:0,60,739	0/0:27,0:27:69.91:0,70,791	1/1:0,24:24:66.17:709,66,0	1/1:0,17:17:45.11:484,45,0	1/1:1,39:40:99:1193,111,0	1/1:3,27:30:81.18:856,81,0	1/1:2,23:25:66.17:709,66,0	1/1:0,25:25:75.19:806,75,0	1/1:0,16:16:48.12:516,48,0	0/0:26,0:26:75.24:0,75,986	1/1:0,24:24:72.18:774,72,0	1/1:1,22:23:63.16:677,63,0	1/1:3,23:26:66.16:709,66,0	1/1:3,31:34:90.23:967,90,0	1/1:3,24:27:69.17:742,69,0	1/1:1,25:26:69.17:742,69,0	1/1:3,22:25:66.15:699,66,0	1/1:0,28:28:75.18:806,75,0	1/1:1,27:28:75.19:806,75,0	0/0:20,0:20:60.17:0,60,759	1/1:1,11:12:24.06:258,24,0	1/1:5,27:32:81.20:871,81,0	0/0:28,0:28:75.23:0,75,965	1/1:1,23:24:69.17:742,69,0	1/1:0,26:26:78.20:838,78,0	1/1:2,6:8:18.04:193,18,0
chr10	13688092	.	T	TG	5967.43	PASS	AB=1.000;AC=45;AF=0.804;AN=56;BaseQRankSum=6.003;DP=604;FS=0.946;HRun=2;HaplotypeScore=78.3521;InbreedingCoeff=0.7250;MQ=61.48;MQ0=17;MQRankSum=-2.842;QD=13.00;ReadPosRankSum=1.279;VQSLOD=3.8243;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:45:90:0,90,973	1/1:7,0:7:14.98:148,15,0	0/0:46,0:9:6.65:0,7,103	0/1:33,0:16:12.86:13,0,187	1/1:21,0:18:41.18:316,41,0	1/1:26,0:24:29.97:284,30,0	1/1:21,0:20:30.03:291,30,0	1/1:24,0:22:56.63:480,57,0	1/1:15,0:14:14.98:143,15,0	1/1:17,0:18:44.43:417,44,0	1/1:16,0:16:35.70:303,36,0	0/0:17,0:17:44.80:0,45,442	1/1:13,1:12:14.97:134,15,0	1/1:20,0:20:20.87:172,21,0	1/1:21,0:21:35.27:321,35,0	1/1:20,0:19:23.99:231,24,0	1/1:35,0:33:35.85:354,36,0	1/1:20,0:19:0.48:252,0,0	1/1:21,1:19:53.67:461,54,0	1/1:16,0:15:32.89:294,33,0	1/1:5,0:4:3.01:32,3,0	0/0:15,0:15:26.49:0,26,271	1/1:17,0:17:14.51:124,15,0	1/1:25,0:25:0.65:215,1,0	0/0:20,0:20:57.07:0,57,595	1/1:27,0:25:65.46:536,65,0	1/1:25,2:26:35.78:352,36,0	1/1:8,0:7:9.02:94,9,0
chr10	13688094	.	G	GGTT	12321.10	PASS	AB=0.532;AC=43;AF=0.768;AN=56;BaseQRankSum=-2.507;DP=658;FS=1.985;HRun=0;HaplotypeScore=96.3875;InbreedingCoeff=0.8540;MQ=59.09;MQ0=20;MQRankSum=-5.691;QD=25.88;ReadPosRankSum=0.122;VQSLOD=4.9993;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:47:99:0,102,1363	1/1:0,4:6:15.05:268,15,0	0/0:43,0:8:9.55:0,10,99	0/0:32,0:16:22.50:0,23,256	1/1:5,6:21:45.02:631,45,0	1/1:6,19:29:33.07:650,33,0	1/1:1,15:20:30.10:629,30,0	1/1:8,16:26:70.27:943,70,0	1/1:5,10:15:21.05:369,21,0	1/1:2,14:19:50.78:680,51,0	1/1:3,12:19:41.81:528,42,0	0/0:14,0:17:44.82:0,45,547	1/1:6,8:13:20.56:365,21,0	1/1:2,16:21:23.71:452,24,0	1/1:2,12:23:36.11:684,36,0	1/1:3,15:20:26.63:584,27,0	1/1:5,24:34:39.12:813,39,0	1/1:3,15:20:4.92:596,5,0	1/1:10,14:24:66.08:838,66,0	1/1:2,12:16:33.02:604,33,0	1/1:1,0:6:3.01:41,3,0	0/0:13,0:17:35.09:0,35,383	1/1:2,3:19:18.89:281,19,0	0/1:3,18:24:3.70:563,0,4	0/0:21,0:21:57.09:0,57,833	1/1:7,20:32:82.08:975,82,0	1/1:5,19:27:38.56:559,39,0	1/1:5,7:12:15.88:270,16,0
chr10	13689476	.	C	CT	16292.04	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-13.832;DP=679;FS=3.254;HRun=7;HaplotypeScore=62.9113;InbreedingCoeff=0.9982;MQ=76.24;MQ0=0;MQRankSum=-5.341;QD=30.57;ReadPosRankSum=2.944;VQSLOD=5.2434;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,120,1158	1/1:0,13:13:33.10:399,33,0	0/0:18,0:18:36.93:0,37,343	0/0:18,0:18:44.98:0,45,410	1/1:4,31:34:93.24:1102,93,0	1/1:0,28:28:75.23:906,75,0	1/1:2,19:21:51.16:616,51,0	1/1:6,32:38:93.26:1099,93,0	1/1:3,17:21:45.60:533,46,0	1/1:4,21:25:60.18:725,60,0	1/1:0,21:22:60.18:723,60,0	0/0:15,0:15:39.06:0,39,377	1/1:2,10:12:30.09:362,30,0	1/1:3,17:20:45.14:544,45,0	1/1:2,25:27:63.19:761,63,0	1/1:3,32:35:90.28:1087,90,0	1/1:1,26:27:75.23:906,75,0	1/1:0,6:6:18.06:217,18,0	1/1:7,18:25:54.16:647,54,0	1/1:1,29:30:81.21:962,81,0	1/1:1,16:17:42.13:507,42,0	0/0:27,0:27:69.11:0,69,666	1/1:1,18:19:51.16:616,51,0	1/1:3,23:26:69.21:830,69,0	0/0:22,0:22:57.08:0,57,550	1/1:6,40:46:99:1450,120,0	1/1:3,17:20:48.15:580,48,0	1/1:0,20:20:60.18:718,60,0
chr10	13690664	.	TCTCCTCCTCCTC	T	17643.56	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=7.410;DP=697;FS=17.504;HRun=0;HaplotypeScore=291.8230;InbreedingCoeff=0.9174;MQ=51.38;MQ0=12;MQRankSum=-6.829;QD=33.86;ReadPosRankSum=4.035;VQSLOD=2.2245;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:69.23:0,69,3315	1/1:11,0:11:21.07:541,21,0	0/0:39,0:15:8.15:0,8,89	0/0:34,0:24:14.37:0,14,343	1/1:18,1:19:8.85:175,9,0	1/1:14,3:17:24.01:646,24,0	1/1:22,2:24:14.64:350,15,0	1/1:31,2:31:45.14:891,45,0	1/1:18,3:21:36.12:999,36,0	1/1:29,1:30:62.46:1675,62,0	1/1:15,0:15:6.02:197,6,0	0/0:30,0:30:66.18:0,66,3064	1/1:30,1:31:63.18:1553,63,0	1/1:17,2:19:33.06:849,33,0	1/1:39,2:40:57.08:1443,57,0	1/1:29,4:33:54.19:1567,54,0	1/1:14,0:14:12.04:309,12,0	1/1:15,1:16:24.08:607,24,0	1/1:18,3:21:33.11:956,33,0	1/1:15,0:15:24.03:556,24,0	1/1:53,2:53:24.27:433,24,0	0/0:20,0:19:40.95:0,41,1984	1/1:14,0:14:8.88:207,9,0	1/1:29,0:28:15.63:326,16,0	0/0:18,0:17:31.92:0,32,1280	1/1:27,1:27:57.20:1636,57,0	1/1:29,1:30:54.18:1358,54,0	1/1:5,0:5:12.04:370,12,0
chr10	13690682	.	CCT	C	2941.09	PASS	AB=0.710;AC=23;AF=0.411;AN=56;BaseQRankSum=11.605;DP=697;FS=4.632;HRun=0;HaplotypeScore=242.7219;InbreedingCoeff=-0.5050;MQ=49.82;MQ0=23;MQRankSum=-8.160;QD=5.73;ReadPosRankSum=8.784;VQSLOD=2.1898;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,108,1718	1/1:3,5:8:20.54:150,21,0	0/0:33,0:9:26.43:0,26,255	0/0:35,0:19:31.23:0,31,377	0/1:15,11:25:17.67:18,0,222	0/1:8,6:13:77.25:96,0,77	0/1:15,9:24:29.11:29,0,399	0/1:29,0:27:99:222,0,286	0/1:9,12:21:99:109,0,108	0/1:17,14:31:99:344,0,198	0/1:9,8:16:13.24:13,0,188	0/0:30,0:30:87.19:0,87,1395	0/1:20,13:32:43.51:324,0,44	0/1:16,8:24:83.20:128,0,83	0/1:18,19:36:99:246,0,210	0/1:13,15:28:80.15:290,0,80	0/1:9,7:16:31.85:32,0,38	0/1:9,6:15:81.82:102,0,82	0/1:13,6:18:99:150,0,206	0/1:8,8:15:79.70:80,0,80	0/1:32,9:39:99:102,0,175	0/0:27,0:24:68.04:0,68,1109	0/1:7,7:13:0.05:0,0,106	0/1:24,11:34:3.76:4,0,335	0/0:19,0:18:52.98:0,53,792	0/1:17,15:30:99:316,0,288	0/1:15,13:28:31.26:279,0,31	0/1:1,4:5:22.19:69,0,22
chr10	13690693	.	TCCC	T	2885.39	PASS	AB=0.700;AC=22;AF=0.393;AN=56;BaseQRankSum=14.496;DP=692;FS=6.004;HRun=3;HaplotypeScore=242.1253;InbreedingCoeff=-0.2811;MQ=53.28;MQ0=26;MQRankSum=-12.615;QD=6.30;ReadPosRankSum=5.112;VQSLOD=-0.1838;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,105,1641	1/1:0,5:5:14.95:132,15,0	0/0:32,0:10:23.93:0,24,229	0/0:48,0:23:14.78:0,15,279	0/0:15,10:25:26.21:0,26,186	0/1:8,6:13:14.95:133,0,15	0/1:23,9:32:12.24:12,0,272	0/0:22,0:20:15.39:0,15,277	0/1:12,12:24:70.97:183,0,71	0/1:13,15:28:99:329,0,125	0/1:13,8:20:40.30:40,0,125	0/0:27,0:27:78.16:0,78,1436	1/1:14,13:26:23.87:318,24,0	0/1:15,8:23:10.59:167,0,11	0/1:15,19:33:43.44:283,0,43	0/1:15,15:30:30.61:375,0,31	0/1:8,7:15:11.84:59,0,12	0/1:6,6:12:43.87:114,0,44	0/1:21,6:26:99:124,0,267	0/1:10,8:17:20.15:113,0,20	0/1:32,8:37:2.83:3,0,75	0/0:25,0:22:63.58:0,64,1142	0/1:10,7:16:0.39:0,0,99	0/1:19,11:29:27.94:28,0,162	0/0:17,0:16:27.13:0,27,666	0/1:18,15:31:99:302,0,195	0/1:11,12:23:26.91:242,0,27	0/1:1,4:5:9.98:94,0,10
chr10	13690696	.	CT	C	1686.01	PASS	AB=0.998;AC=19;AF=0.339;AN=56;BaseQRankSum=11.103;DP=698;FS=4.470;HRun=1;HaplotypeScore=228.5789;InbreedingCoeff=-0.3600;MQ=52.49;MQ0=21;MQRankSum=-10.967;QD=4.07;ReadPosRankSum=4.219;VQSLOD=0.4823;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,102,1574	1/1:6,0:6:9.54:85,10,0	0/0:34,1:10:24.92:0,25,358	0/0:49,1:22:39.63:0,40,495	0/0:26,0:25:31.48:0,31,264	0/1:15,0:14:33.71:34,0,50	0/1:34,0:34:18.29:18,0,435	0/0:24,0:22:31.16:0,31,467	0/1:27,0:27:99:117,0,111	0/1:28,0:28:99:213,0,209	0/0:19,0:18:27.85:0,28,240	0/0:25,0:25:72.25:0,72,1148	0/1:26,0:25:41.87:147,0,42	0/1:25,0:25:42.54:84,0,43	0/1:35,0:34:99:168,0,124	0/1:30,0:30:90.68:209,0,91	0/1:16,0:16:17.15:46,0,17	0/1:11,0:12:24.54:25,0,83	0/1:27,0:26:99:123,0,500	0/1:17,0:16:74.49:87,0,74	0/1:37,1:36:12.51:13,0,171	0/0:25,0:22:66.21:0,66,1032	0/1:16,0:15:18.70:19,0,117	0/0:24,5:29:32.52:0,33,272	0/0:17,0:16:43.37:0,43,670	0/1:33,0:32:99:260,0,298	0/1:24,0:24:93.91:161,0,94	0/1:5,0:5:41.23:45,0,41
chr10	13690697	.	TCTC	T	4969.64	PASS	AB=0.754;AC=32;AF=0.571;AN=56;BaseQRankSum=13.535;DP=699;FS=24.082;HRun=0;HaplotypeScore=234.5354;InbreedingCoeff=0.2023;MQ=52.57;MQ0=19;MQRankSum=-14.573;QD=9.67;ReadPosRankSum=-1.049;VQSLOD=2.8216;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,102,2204	1/1:2,4:6:18.02:191,18,0	0/0:35,0:10:26.76:0,27,540	0/0:50,0:22:4.45:0,4,476	0/1:16,10:25:1.46:161,0,1	1/1:9,6:14:26.68:170,27,0	0/1:25,9:34:99:177,0,105	0/1:24,0:22:3.58:4,0,120	1/1:15,12:27:31.70:276,32,0	0/1:13,15:28:6.32:473,0,6	0/1:11,8:18:38.65:80,0,39	0/0:25,0:25:71.90:0,72,1491	1/1:5,13:26:43.05:389,43,0	1/1:17,7:25:38.77:284,39,0	1/1:17,18:34:31.34:431,31,0	1/1:15,15:30:38.61:471,39,0	1/1:9,7:16:12.53:113,13,0	0/1:8,4:12:5.91:53,0,6	0/1:22,5:26:99:173,0,283	1/1:9,8:16:19.29:220,19,0	0/1:30,7:36:16.32:136,0,16	0/0:25,0:22:63.13:0,63,1294	0/1:9,7:15:1.77:71,0,2	0/1:20,11:31:59.55:91,0,60	0/0:16,0:16:41.73:0,42,797	0/1:18,15:32:24.57:513,0,25	1/1:12,12:24:41.90:389,42,0	0/1:2,3:5:17.60:103,0,18
chr10	13690700	.	C	CCTT	17438.97	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=3.900;DP=745;FS=20.952;HRun=0;HaplotypeScore=199.4850;InbreedingCoeff=0.9921;MQ=54.30;MQ0=15;MQRankSum=-10.178;QD=31.65;ReadPosRankSum=-5.308;VQSLOD=2.7326;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:93.28:0,93,1370	1/1:6,0:6:17.79:237,18,0	0/0:39,0:12:24.06:0,24,352	0/0:52,0:25:28.59:0,29,358	1/1:14,14:28:65.61:951,66,0	1/1:11,7:17:29.94:417,30,0	1/1:11,23:34:72.16:1318,72,0	1/1:5,23:30:75.21:1390,75,0	1/1:15,12:27:59.88:881,60,0	1/1:16,13:29:81.19:1382,81,0	1/1:11,10:21:44.72:677,45,0	0/0:27,0:27:66.20:0,66,962	1/1:26,1:26:47.96:584,48,0	1/1:10,15:26:44.78:625,45,0	1/1:22,14:37:71.98:1039,72,0	1/1:19,11:30:66.81:924,67,0	1/1:9,9:17:26.71:320,27,0	1/1:8,5:14:19.54:374,20,0	1/1:13,16:28:69.14:1122,69,0	1/1:10,9:18:38.94:542,39,0	1/1:14,25:40:53.48:746,53,0	0/0:22,0:21:51.16:0,51,751	1/1:9,8:16:30.01:510,30,0	1/1:28,4:32:40.79:819,41,0	0/0:17,0:17:33.08:0,33,475	1/1:19,14:33:96.30:1653,96,0	1/1:17,8:25:53.77:759,54,0	1/1:5,0:5:14.08:169,14,0
chr10	13692751	.	TAA	T	3044.93	PASS	AB=0.768;AC=43;AF=0.768;AN=56;BaseQRankSum=4.582;DP=387;FS=19.308;HRun=14;HaplotypeScore=79.8673;InbreedingCoeff=0.4798;MQ=46.88;MQ0=23;MQRankSum=-4.699;QD=10.84;ReadPosRankSum=3.332;VQSLOD=0.8352;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,1:38:87.14:0,87,1094	0/1:4,2:6:26.22:80,0,26	0/0:21,0:1:3.01:0,3,33	0/0:18,0:5:2.83:0,3,19	1/1:4,14:16:18.36:261,18,0	1/1:5,8:14:21.59:161,22,0	1/1:1,2:2:3:28,3,0	1/1:10,6:9:14.99:139,15,0	1/1:0,5:5:2.61:59,3,0	1/1:5,11:15:23.59:251,24,0	1/1:4,8:11:18.01:166,18,0	0/0:9,0:9:20.85:0,21,252	1/1:6,3:6:11.73:94,12,0	1/1:5,5:10:14.87:139,15,0	1/1:5,9:16:41.24:330,41,0	1/1:1,13:11:21:195,21,0	1/1:2,5:7:5.86:98,6,0	0/1:6,4:9:12.69:91,0,13	1/1:10,7:7:5.82:55,6,0	1/1:12,3:16:5.19:69,5,0	1/1:0,3:3:3:28,3,0	0/1:10,0:10:5.84:6,0,75	1/1:7,7:14:21.37:165,21,0	1/1:4,5:10:23.74:199,24,0	0/0:17,0:17:39.11:0,39,453	1/1:3,12:14:36.02:333,36,0	1/1:8,9:16:3.80:181,4,0	1/1:5,2:8:11.65:87,12,0
chr10	13692775	.	AAAAAAAAAAAACAAAAAAAAAACC	A	8358.36	PASS	AB=1.000;AC=40;AF=0.714;AN=56;BaseQRankSum=2.792;DP=476;FS=1.708;HRun=0;HaplotypeScore=235.9284;InbreedingCoeff=0.5401;MQ=40.60;MQ0=35;MQRankSum=-6.651;QD=25.03;ReadPosRankSum=-3.729;VQSLOD=3.4012;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:34:84.24:0,84,6004	0/1:5,0:5:24.12:24,0,198	0/0:30,0:4:9.50:0,10,235	0/0:33,0:3:2.90:0,3,16	1/1:20,1:20:30.38:448,30,0	1/1:8,2:10:1.11:512,1,0	1/1:3,0:2:2.99:25,3,0	0/1:11,0:9:8.26:81,0,8	1/1:11,2:13:21.92:522,22,0	1/1:20,0:20:9.43:614,9,0	1/1:16,1:13:17.94:348,18,0	0/0:14,0:12:30.10:0,30,2454	1/1:9,1:8:12.03:335,12,0	1/1:18,1:19:30.46:624,30,0	1/1:22,1:23:33.66:571,34,0	1/1:13,2:15:32.55:650,33,0	1/1:8,0:8:14.36:87,14,0	1/1:7,1:6:11.95:294,12,0	1/1:18,0:11:18.52:294,19,0	1/1:20,0:16:8.52:362,9,0	1/1:6,1:5:8.98:190,9,0	0/0:8,0:7:17.93:0,18,708	1/1:22,1:22:23.02:776,23,0	0/1:11,0:11:1.90:62,0,2	0/0:21,0:20:39.13:0,39,2717	0/1:34,0:31:14.06:693,0,14	1/1:26,2:25:8.24:594,8,0	1/1:10,0:8:19.27:251,19,0
chr10	13692796	.	AACC	A	6487.76	PASS	AB=1.000;AC=43;AF=0.768;AN=56;BaseQRankSum=4.612;DP=383;FS=1.749;HRun=0;HaplotypeScore=73.2674;InbreedingCoeff=0.7471;MQ=43.02;MQ0=24;MQRankSum=-4.412;QD=28.33;ReadPosRankSum=1.268;VQSLOD=4.9355;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:32:67.79:0,68,1173	0/1:2,0:2:39.02:43,0,39	0/0:37,0:10:14.39:0,14,257	0/0:41,0:6:10.79:0,11,78	1/1:2,9:11:20.50:325,21,0	1/1:7,0:7:21.06:295,21,0	1/1:0,7:7:6.02:95,6,0	1/1:1,10:11:21.03:283,21,0	1/1:8,0:8:15.03:194,15,0	1/1:1,17:18:45.87:738,46,0	1/1:4,9:10:24.08:379,24,0	0/0:15,0:13:36.10:0,36,610	1/1:1,8:8:9.02:123,9,0	1/1:5,12:17:36.11:520,36,0	1/1:5,5:10:15.03:191,15,0	1/1:5,7:12:24.55:348,25,0	1/1:2,0:2:6.02:70,6,0	1/1:3,4:7:12.02:142,12,0	1/1:8,4:8:21.07:302,21,0	1/1:4,10:13:36.08:494,36,0	1/1:4,2:4:8.99:102,9,0	0/0:7,0:7:0.97:0,1,223	1/1:5,9:12:36.12:547,36,0	1/1:1,5:6:9.03:131,9,0	0/0:19,0:18:42.06:0,42,736	1/1:3,20:18:16.44:639,16,0	1/1:4,12:15:27.01:379,27,0	1/1:1,3:3:9.03:147,9,0
chr10	13692797	.	ACC	A	5083.22	PASS	AB=1.000;AC=44;AF=0.786;AN=56;BaseQRankSum=6.019;DP=379;FS=1.106;HRun=2;HaplotypeScore=73.5492;InbreedingCoeff=0.7416;MQ=43.24;MQ0=20;MQRankSum=-5.005;QD=22.01;ReadPosRankSum=1.531;VQSLOD=3.1126;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:32:68.91:0,69,1029	0/1:2,0:2:28.79:29,0,38	0/0:36,0:10:14.36:0,14,229	0/0:42,0:6:11.78:0,12,99	1/1:11,0:11:19.73:246,20,0	1/1:7,0:7:21.07:265,21,0	1/1:7,0:7:6.02:69,6,0	1/1:11,0:11:21.02:245,21,0	1/1:2,6:8:14.98:171,15,0	1/1:18,0:18:45.52:570,46,0	1/1:13,0:10:24.07:281,24,0	0/0:15,0:13:35.97:0,36,491	1/1:9,0:8:8.96:87,9,0	1/1:13,4:17:36.04:411,36,0	1/1:8,2:10:14.97:150,15,0	1/1:9,3:12:24.96:278,25,0	1/1:2,0:2:6.02:70,6,0	1/1:5,2:7:11.97:121,12,0	1/1:6,3:8:21.06:246,21,0	1/1:11,3:13:36.07:408,36,0	1/1:5,1:4:8.98:88,9,0	0/1:7,0:7:0.26:0,0,180	1/1:11,3:12:36.10:410,36,0	1/1:5,1:6:9.03:103,9,0	0/0:19,0:18:42.03:0,42,625	1/1:23,0:18:19.29:459,19,0	1/1:15,0:15:26.75:272,27,0	1/1:3,0:3:9.03:104,9,0
chr10	13694995	.	AAAG	A	17058.60	PASS	AB=0.513;AC=43;AF=0.768;AN=56;BaseQRankSum=11.700;DP=593;FS=22.020;HRun=0;HaplotypeScore=89.7238;InbreedingCoeff=0.8947;MQ=76.06;MQ0=0;MQRankSum=-4.059;QD=37.16;ReadPosRankSum=3.266;VQSLOD=3.7810;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,126,2705	1/1:3,7:10:18.06:280,18,0	0/0:22,0:22:58.76:0,59,1067	0/0:12,0:11:21.07:0,21,440	1/1:3,22:25:54.14:806,54,0	1/1:3,20:23:54.18:821,54,0	1/1:1,16:17:36.12:558,36,0	1/1:4,25:29:75.21:1100,75,0	1/1:0,29:29:81.28:1257,81,0	1/1:1,18:19:54.10:790,54,0	1/1:0,14:14:39.09:560,39,0	0/0:28,0:28:84.27:0,84,1754	1/1:1,16:17:39.13:609,39,0	1/1:1,16:17:39.13:592,39,0	1/1:1,22:23:54.18:843,54,0	1/1:0,15:15:36.12:562,36,0	1/1:1,23:24:54.18:843,54,0	1/1:1,18:19:48.16:750,48,0	1/1:2,24:26:72.22:1074,72,0	1/1:1,21:22:63.17:945,63,0	1/1:0,19:19:45.11:666,45,0	0/0:13,0:13:33.11:0,33,672	1/1:1,12:13:30:468,30,0	0/1:1,19:20:25.33:512,0,25	0/0:15,0:15:39.07:0,39,780	1/1:3,31:34:93.29:1386,93,0	1/1:3,34:37:90.31:1404,90,0	1/1:0,7:7:15.05:234,15,0
chr10	13697408	.	CGTGTGTGTGTGTGTGT	C	3045.08	PASS	AB=0.771;AC=30;AF=0.577;AN=52;BaseQRankSum=0.789;DP=568;FS=2.416;HRun=0;HaplotypeScore=220.1222;InbreedingCoeff=0.1185;MQ=58.79;MQ0=13;MQRankSum=-1.696;QD=7.50;ReadPosRankSum=0.282;VQSLOD=2.8328;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:23:24.08:0,24,1194	1/1:1,0:5:5.58:63,6,0	./.	0/0:18,0:12:3.90:0,4,41	0/1:8,5:13:11.42:14,0,11	1/1:10,11:21:2.26:127,2,0	1/1:27,0:27:13.76:165,14,0	0/1:14,10:23:3.11:247,0,3	0/1:6,3:10:12.55:125,0,13	0/1:18,6:24:99:330,0,249	./.	0/0:23,0:24:36.56:0,37,1225	1/1:11,7:18:1.50:72,1,0	0/1:10,11:21:63.08:125,0,63	1/1:17,9:26:0.16:233,0,0	1/1:11,9:20:4.09:276,4,0	0/1:32,0:32:62.43:223,0,62	0/1:12,5:16:20.49:122,0,20	1/1:19,0:16:5.99:111,6,0	0/0:6,0:6:3.01:0,3,100	1/1:58,0:57:6.56:254,7,0	0/0:8,0:10:12.04:0,12,303	1/1:4,0:4:2.52:19,3,0	0/0:19,11:30:2.61:0,3,11	0/0:17,0:23:18.06:0,18,826	0/1:24,8:32:99:232,0,104	1/1:15,9:25:10.62:389,11,0	1/1:10,0:9:7.55:78,8,0
chr10	13697994	.	CAT	C	5151.72	PASS	AB=0.846;AC=42;AF=0.750;AN=56;BaseQRankSum=-0.722;DP=592;FS=4.242;HRun=0;HaplotypeScore=144.4175;InbreedingCoeff=0.6937;MQ=62.76;MQ0=7;MQRankSum=3.166;QD=11.06;ReadPosRankSum=0.967;VQSLOD=4.3146;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:46:99:0,108,1095	0/1:5,1:6:4.95:79,0,5	0/0:18,0:9:10.88:0,11,114	0/1:8,0:4:1.58:3,0,2	0/1:4,13:17:2.96:39,0,3	1/1:17,0:16:18.34:136,18,0	1/1:25,4:29:31.60:252,32,0	0/1:24,1:24:6.19:381,0,6	1/1:19,0:19:9.72:121,10,0	1/1:16,3:19:54.63:494,55,0	1/1:12,0:12:20.96:171,21,0	0/0:17,0:17:34.15:0,34,327	1/1:18,2:20:21.09:206,21,0	1/1:17,1:18:9.84:230,10,0	1/1:25,1:26:10.75:188,11,0	1/1:19,1:20:22.56:183,23,0	1/1:35,0:35:47.98:431,48,0	1/1:23,0:23:26.66:245,27,0	1/1:21,0:20:49.81:358,50,0	1/1:13,1:14:22.82:144,23,0	1/1:25,0:25:39.17:295,39,0	0/0:18,0:18:32.02:0,32,278	1/1:16,2:17:14.67:105,15,0	1/1:30,0:30:45.33:315,45,0	0/0:26,0:26:65.12:0,65,606	1/1:24,0:24:54.39:442,54,0	1/1:19,0:19:27.75:176,28,0	1/1:21,0:21:16.66:156,17,0
chr10	13697996	.	T	TACAC	2820.57	PASS	AB=0.944;AC=35;AF=0.648;AN=54;BaseQRankSum=2.588;DP=608;FS=4.149;HRun=0;HaplotypeScore=178.2905;InbreedingCoeff=-0.3964;MQ=62.38;MQ0=9;MQRankSum=0.212;QD=4.86;ReadPosRankSum=-0.925;VQSLOD=2.3977;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:31,18:52:36.67:750,0,37	0/1:6,0:6:2.16:2,0,36	./.	0/0:9,0:4:1.25:0,1,3	1/1:15,0:15:0.15:8,0,0	1/1:16,0:16:17.85:68,18,0	0/1:30,0:30:25.68:89,0,26	1/1:25,0:23:10.57:108,11,0	0/1:19,0:19:28.11:71,0,28	1/1:20,0:20:2.89:24,3,0	0/1:12,0:12:9.01:9,0,25	0/1:9,7:20:35.27:181,0,35	0/1:19,0:19:33.28:33,0,42	0/1:18,0:18:51.10:51,0,62	0/1:26,0:26:50.07:53,0,50	0/1:18,0:18:33.50:43,0,33	0/1:33,0:33:68.17:135,0,68	1/1:23,0:23:25.38:102,25,0	0/1:19,0:18:1.31:58,0,1	1/1:14,0:14:9.83:34,10,0	1/1:28,0:28:7.28:29,7,0	1/1:11,8:21:6.02:140,6,0	0/1:19,0:18:12.30:42,0,12	0/1:32,0:32:4.15:73,0,4	0/1:16,10:28:26.51:483,0,27	0/1:25,0:25:13.61:62,0,14	1/1:19,0:19:25.24:177,25,0	0/1:22,0:22:12.99:141,0,13
chr10	13698026	.	C	CAG	9334.08	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=6.882;DP=630;FS=7.664;HRun=0;HaplotypeScore=125.8871;InbreedingCoeff=0.8313;MQ=64.79;MQ0=12;MQRankSum=2.157;QD=20.88;ReadPosRankSum=5.514;VQSLOD=5.1156;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:47:21.73:0,22,439	1/1:5,1:6:2.38:91,2,0	0/0:36,0:14:32.89:0,33,308	0/0:35,0:21:50.41:0,50,503	1/1:17,1:18:20.94:186,21,0	1/1:1,18:19:13.86:373,14,0	1/1:8,29:39:33.55:542,34,0	1/1:21,1:20:19.11:405,19,0	1/1:10,8:18:38.85:512,39,0	1/1:6,12:18:29.64:366,30,0	1/1:7,2:9:16.18:173,16,0	0/0:20,0:20:6.53:0,7,151	1/1:4,15:19:18.03:352,18,0	1/1:13,6:19:32.20:451,32,0	1/1:6,14:20:15.85:422,16,0	1/1:3,17:21:19.57:382,20,0	1/1:18,11:29:73.04:923,73,0	1/1:5,17:22:9.13:513,9,0	1/1:7,16:23:35.11:552,35,0	1/1:3,9:12:12.01:220,12,0	1/1:3,19:23:10.26:166,10,0	0/0:19,0:19:14.08:0,14,160	1/1:4,13:16:25.33:442,25,0	1/1:4,22:26:14.77:531,15,0	0/0:25,0:25:4.18:0,4,217	1/1:5,17:23:47.96:548,48,0	1/1:2,21:23:35.62:574,36,0	1/1:10,10:20:2.60:610,3,0
chr10	13698030	.	C	CAG	9912.66	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=7.336;DP=611;FS=7.935;HRun=0;HaplotypeScore=121.9254;InbreedingCoeff=0.8963;MQ=67.20;MQ0=10;MQRankSum=-0.797;QD=23.05;ReadPosRankSum=2.736;VQSLOD=5.5415;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:44:27.87:0,28,492	1/1:5,0:5:2.51:92,3,0	0/0:35,0:14:30.26:0,30,323	0/0:37,0:24:42.30:0,42,518	1/1:15,1:16:23.68:180,24,0	1/1:18,0:18:21.07:381,21,0	1/1:38,0:38:36.92:574,37,0	1/1:20,0:18:45.07:466,45,0	1/1:17,1:18:16.05:486,16,0	1/1:18,0:18:41.08:408,41,0	1/1:8,0:8:16.56:187,17,0	0/0:20,0:20:6.82:0,7,152	1/1:18,0:18:19.13:374,19,0	1/1:17,0:17:27.44:482,27,0	1/1:21,0:21:23.97:472,24,0	1/1:21,0:21:23.51:388,24,0	1/1:29,0:29:74.98:934,75,0	1/1:19,0:19:30.07:549,30,0	1/1:22,0:22:55.10:616,55,0	1/1:10,0:10:12.04:216,12,0	1/1:23,0:22:10.26:167,10,0	0/0:19,0:19:11.10:0,11,139	1/1:17,0:16:25.33:439,25,0	1/1:27,0:27:46.29:664,46,0	0/0:25,0:25:7.42:0,7,240	1/1:21,0:21:57.71:565,58,0	1/1:23,1:24:38.62:612,39,0	1/1:19,1:20:38.12:663,38,0
chr10	13699819	.	A	AG	11441.22	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-10.532;DP=591;FS=3.646;HRun=8;HaplotypeScore=61.0602;InbreedingCoeff=0.9219;MQ=83.87;MQ0=0;MQRankSum=-3.821;QD=24.60;ReadPosRankSum=2.535;VQSLOD=5.8458;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:81.04:0,81,741	1/1:0,7:7:15.04:173,15,0	0/0:15,0:14:20.99:0,21,187	0/0:22,0:22:47.74:0,48,404	1/1:2,5:7:12.92:136,13,0	1/1:4,13:17:2.62:284,3,0	1/1:5,28:33:66.20:762,66,0	1/1:5,9:14:30.04:328,30,0	1/1:3,22:25:61.42:696,61,0	1/1:4,4:8:12.03:138,12,0	1/1:0,4:4:9.03:104,9,0	0/0:21,0:21:51:0,51,462	1/1:3,21:24:51.15:589,51,0	1/1:2,21:23:48.14:552,48,0	1/1:2,21:23:54.16:623,54,0	1/1:0,27:27:69.19:796,69,0	1/1:7,35:42:20.04:991,20,0	1/1:4,25:29:68.94:770,69,0	1/1:5,23:29:65.81:683,66,0	1/1:3,8:11:15.02:161,15,0	1/1:7,32:39:81.24:935,81,0	0/0:18,0:18:42.01:0,42,384	1/1:0,8:8:24.07:277,24,0	1/1:3,33:36:84.25:969,84,0	0/0:18,0:18:48:0,48,433	1/1:7,18:25:27.13:541,27,0	1/1:3,26:29:72.21:831,72,0	1/1:0,5:5:9.03:104,9,0
chr10	13700857	.	G	GC	24449.39	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-14.243;DP=773;FS=2.442;HRun=2;HaplotypeScore=65.9784;InbreedingCoeff=0.9880;MQ=75.90;MQ0=0;MQRankSum=-1.858;QD=39.12;ReadPosRankSum=0.915;VQSLOD=5.4001;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,111,1361	1/1:1,10:11:30.10:424,30,0	0/0:14,0:14:33.09:0,33,398	0/0:14,0:14:29.82:0,30,358	1/1:1,18:19:57.19:808,57,0	1/1:0,20:20:54.18:777,54,0	1/1:2,40:42:99:1555,108,0	1/1:4,33:37:96.31:1360,96,0	1/1:0,19:19:54.18:777,54,0	1/1:2,23:25:69.23:993,69,0	1/1:0,14:14:36.12:517,36,0	0/0:35,0:35:99:0,105,1264	1/1:0,33:34:90.30:1289,90,0	1/1:0,31:31:87.29:1252,87,0	1/1:1,49:50:99:1944,135,0	1/1:1,33:35:99:1423,99,0	1/1:4,37:41:99:1468,102,0	1/1:0,24:24:72.24:1037,72,0	1/1:0,30:30:90.29:1277,90,0	1/1:0,27:28:78.14:1055,78,0	1/1:2,53:55:99:2159,151,0	0/0:31,0:31:90.24:0,90,1066	1/1:0,15:15:45.15:644,45,0	1/1:2,35:36:99:1425,99,0	0/0:15,0:15:45.10:0,45,527	1/1:1,18:19:54.15:756,54,0	1/1:0,35:34:96.32:1381,96,0	1/1:1,3:4:9.03:130,9,0
chr10	13701604	.	C	CA	17042.23	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-13.082;DP=685;FS=2.820;HRun=7;HaplotypeScore=61.4899;InbreedingCoeff=0.9653;MQ=69.73;MQ0=0;MQRankSum=-1.193;QD=30.99;ReadPosRankSum=0.484;VQSLOD=5.0155;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:90.14:0,90,869	1/1:1,13:14:39.12:471,39,0	0/0:18,0:16:3.97:0,4,244	0/0:17,0:13:16.98:0,17,111	1/1:4,25:29:72.18:853,72,0	1/1:4,19:24:51.16:616,51,0	1/1:2,25:27:69.21:834,69,0	1/1:3,27:30:81.25:978,81,0	1/1:1,17:18:45.14:544,45,0	1/1:3,26:29:78.24:941,78,0	1/1:0,14:14:39.12:471,39,0	0/0:31,0:31:78.10:0,78,747	1/1:1,15:16:45.14:544,45,0	1/1:1,22:23:66.20:797,66,0	1/1:3,26:29:72.22:870,72,0	1/1:5,27:32:76.10:897,76,0	1/1:6,34:40:99:1184,99,0	1/1:0,29:31:90.01:1043,90,0	1/1:4,24:28:66.20:796,66,0	1/1:2,19:21:54.15:640,54,0	1/1:3,25:28:66.20:797,66,0	0/0:17,0:17:51.07:0,51,488	1/1:3,15:18:45.13:534,45,0	1/1:3,40:43:99:1377,114,0	0/0:17,0:17:51.06:0,51,485	1/1:2,29:30:85.13:1004,85,0	1/1:2,17:19:54.12:636,54,0	1/1:0,6:6:18.06:217,18,0
chr10	13705943	.	GGTGGCCT	G	17411.13	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=12.194;DP=493;FS=3.216;HRun=0;HaplotypeScore=130.3267;InbreedingCoeff=0.9665;MQ=66.38;MQ0=0;MQRankSum=-12.881;QD=46.06;ReadPosRankSum=0.864;VQSLOD=4.3383;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,99,3484	1/1:1,5:6:15.05:376,15,0	0/0:11,0:11:27.09:0,27,917	0/0:9,0:9:24.07:0,24,686	1/1:1,8:9:15.05:371,15,0	1/1:4,13:17:30.10:753,30,0	1/1:3,20:23:54.70:1351,55,0	1/1:3,15:18:45.15:1055,45,0	1/1:0,21:21:57.20:1431,57,0	1/1:3,18:21:60.19:1342,60,0	1/1:2,6:8:9.03:226,9,0	0/0:28,0:28:75.26:0,75,2611	1/1:4,18:22:45.15:1114,45,0	1/1:2,17:19:36.12:902,36,0	1/1:1,9:10:12.04:299,12,0	1/1:0,14:14:33.11:830,33,0	1/1:1,21:22:39.13:922,39,0	1/1:8,29:37:57.20:1413,57,0	1/1:10,9:19:27.06:524,27,0	1/1:2,11:13:27.05:605,27,0	1/1:9,18:27:24.49:503,24,0	0/0:13,0:13:30.10:0,30,1091	1/1:2,8:10:15.05:358,15,0	1/1:3,14:17:18.53:451,19,0	0/0:18,0:18:48.16:0,48,1785	1/1:1,19:20:57.19:1226,57,0	1/1:5,13:18:39.13:981,39,0	1/1:0,7:7:15.05:378,15,0
chr10	13708221	.	TTGTATGTATGTA	T	13017.33	PASS	AB=0.655;AC=39;AF=0.696;AN=56;BaseQRankSum=9.671;DP=559;FS=4.839;HRun=0;HaplotypeScore=190.3254;InbreedingCoeff=0.7828;MQ=53.45;MQ0=2;MQRankSum=-6.611;QD=33.29;ReadPosRankSum=-0.536;VQSLOD=4.2049;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:57.10:0,57,2222	1/1:0,6:6:12.04:391,12,0	0/0:11,0:8:8.76:0,9,91	0/0:17,0:13:27.06:0,27,359	1/1:12,22:34:6.49:124,6,0	1/1:3,14:17:21.07:706,21,0	1/1:4,6:10:3.01:52,3,0	1/1:29,0:29:48.08:576,48,0	1/1:3,13:16:21.07:547,21,0	1/1:2,18:20:51.14:1346,51,0	1/1:3,14:17:15.05:458,15,0	0/0:20,0:20:60.19:0,60,3123	1/1:3,17:20:36.12:1103,36,0	0/1:9,10:19:3.93:557,0,4	1/1:4,20:24:27.09:705,27,0	1/1:2,21:23:39.13:1258,39,0	0/0:14,16:30:2.97:0,3,10	1/1:3,11:14:15.05:459,15,0	1/1:12,9:21:27.01:553,27,0	1/1:3,10:14:9.03:285,9,0	1/1:4,8:12:5.95:158,6,0	0/0:17,0:17:45.15:0,45,2527	1/1:1,12:13:14.65:404,15,0	0/0:2,8:10:0:0,0,0	0/0:31,0:31:69.19:0,69,2830	1/1:9,22:31:63.05:1382,63,0	1/1:9,28:37:48.08:1324,48,0	1/1:2,12:14:18.06:631,18,0
chr10	13708598	.	CTTCTTTTT	C	5510.88	PASS	AB=0.738;AC=43;AF=0.768;AN=56;BaseQRankSum=1.670;DP=403;FS=3.060;HRun=0;HaplotypeScore=97.7504;InbreedingCoeff=0.6484;MQ=69.07;MQ0=3;MQRankSum=-1.920;QD=18.68;ReadPosRankSum=2.510;VQSLOD=3.9398;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:67.03:0,67,1586	1/1:1,3:6:12.04:244,12,0	0/0:30,0:10:14.83:0,15,206	0/1:15,0:12:6.36:6,0,127	1/1:1,17:18:14.40:152,14,0	1/1:1,15:16:15.05:395,15,0	1/1:2,14:16:11.97:255,12,0	1/1:5,26:31:11.21:667,11,0	1/1:12,1:12:28.03:366,28,0	1/1:0,2:10:18.01:273,18,0	1/1:13,0:13:9.26:212,9,0	0/0:14,0:14:38.19:0,38,926	1/1:8,0:6:10.30:92,10,0	1/1:1,7:8:0.90:76,1,0	0/1:0,11:12:2.31:238,0,2	1/1:6,1:9:23.95:325,24,0	1/1:1,14:15:8.24:229,8,0	1/1:0,14:13:6.02:158,6,0	0/1:3,0:5:0.61:155,0,1	1/1:5,0:5:7.03:74,7,0	1/1:9,2:10:16.57:154,17,0	0/0:19,0:19:46.56:0,47,796	1/1:1,8:9:5.34:33,5,0	1/1:10,2:14:23.38:281,23,0	0/0:14,0:14:36.87:0,37,496	1/1:3,2:17:40.50:420,41,0	1/1:11,0:12:17:301,17,0	1/1:12,1:14:30:403,30,0
chr10	13711921	.	TTAAAAAAA	T	1166.33	PASS	AC=24;AF=0.750;AN=32;BaseQRankSum=-1.627;DP=270;FS=5.478;HRun=0;HaplotypeScore=43.3442;InbreedingCoeff=0.5250;MQ=52.13;MQ0=105;MQRankSum=-0.244;QD=9.26;ReadPosRankSum=2.971;VQSLOD=0.1941;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	1/1:1,0:8:3.01:33,3,0	0/0:46,0:7:7.29:0,7,83	0/0:31,0:12:21.40:0,21,276	1/1:2,15:16:5.82:159,6,0	1/1:9,0:1:2.94:18,3,0	./.	./.	./.	1/1:7,0:7:14.92:129,15,0	1/1:12,3:15:20.69:333,21,0	./.	./.	1/1:3,0:1:2.98:21,3,0	./.	1/1:8,0:2:5.95:42,6,0	./.	./.	./.	1/1:1,12:14:14.78:200,15,0	./.	0/0:9,0:8:3.44:0,3,21	1/1:3,10:11:5.62:158,6,0	./.	0/0:7,0:7:12.04:0,12,375	1/1:5,4:5:1.42:97,1,0	1/1:5,0:2:2.96:19,3,0	1/1:4,5:5:3.01:79,3,0
chr10	13715763	.	GGGGAGGGAGGGAAGGA	G	15114.60	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=10.125;DP=435;FS=1.056;HRun=0;HaplotypeScore=205.0938;InbreedingCoeff=0.9166;MQ=70.83;MQ0=5;MQRankSum=-8.898;QD=47.83;ReadPosRankSum=0.486;VQSLOD=4.5586;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:69.24:0,69,3839	1/1:4,0:4:9.03:294,9,0	0/0:24,0:17:26.94:0,27,1189	0/0:27,0:20:5.42:0,5,1132	1/1:9,0:8:13.73:194,14,0	1/1:19,0:19:33.02:828,33,0	1/1:20,0:20:36.01:629,36,0	1/1:15,0:15:30.05:770,30,0	1/1:12,0:12:32.98:815,33,0	1/1:13,0:13:27.09:783,27,0	1/1:10,0:10:14.90:204,15,0	0/0:12,0:12:30.10:0,30,2021	1/1:9,0:9:14.99:249,15,0	1/1:17,0:17:36.04:1183,36,0	1/1:27,0:27:60.15:1908,60,0	1/1:16,13:29:45.15:1708,45,0	1/1:13,0:11:9.03:241,9,0	1/1:19,0:19:33.04:1033,33,0	1/1:15,0:15:30.10:942,30,0	1/1:7,0:7:17.97:299,18,0	1/1:19,0:19:26.82:358,27,0	0/0:13,0:13:36.12:0,36,1974	1/1:11,0:11:23.98:582,24,0	1/1:14,0:13:18.05:214,18,0	0/0:13,0:13:33.11:0,33,1998	1/1:11,0:11:21.07:561,21,0	1/1:21,0:21:36.08:1133,36,0	1/1:2,0:2:6.02:189,6,0
chr10	13715771	.	AG	A	6183.84	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=10.655;DP=399;FS=1.031;HRun=3;HaplotypeScore=121.6915;InbreedingCoeff=0.9401;MQ=58.82;MQ0=11;MQRankSum=-9.024;QD=22.16;ReadPosRankSum=0.313;VQSLOD=4.1543;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:75.25:0,75,1076	1/1:0,4:4:9.03:105,9,0	0/0:26,2:13:27.08:0,27,361	0/0:27,0:14:29.68:0,30,393	1/1:0,8:7:13.73:100,14,0	1/1:2,15:17:33.01:351,33,0	1/1:1,14:15:36.01:389,36,0	1/1:3,10:11:29.53:314,30,0	1/1:0,12:12:33.01:360,33,0	1/1:2,9:11:27.08:322,27,0	1/1:0,9:9:15:164,15,0	0/0:11,0:11:30.10:0,30,432	1/1:1,6:7:14.99:152,15,0	1/1:1,15:16:36.01:387,36,0	1/1:2,23:25:60.10:663,60,0	1/1:14,14:28:45.09:497,45,0	1/1:4,8:10:9.03:109,9,0	1/1:2,15:17:26.77:324,27,0	1/1:1,10:11:30.09:367,30,0	1/1:1,5:6:17.33:169,17,0	1/1:1,17:18:26.82:243,27,0	0/0:14,0:14:39.12:0,39,557	1/1:0,10:10:23.98:253,24,0	1/1:0,11:10:18.05:216,18,0	0/0:12,0:12:33.11:0,33,475	1/1:3,6:8:21.06:248,21,0	1/1:1,17:18:35.42:381,35,0	1/1:0,2:2:6.02:72,6,0
chr10	13715778	.	GAGGGAGGGAGGAA	G	11680.73	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=10.846;DP=367;FS=4.798;HRun=0;HaplotypeScore=165.0458;InbreedingCoeff=0.8508;MQ=53.26;MQ0=13;MQRankSum=-7.153;QD=46.35;ReadPosRankSum=1.095;VQSLOD=3.9706;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:72.18:0,72,2826	1/1:1,3:4:9.02:247,9,0	0/0:27,0:11:19.68:0,20,746	0/0:28,0:13:12.39:0,12,652	1/1:3,2:5:3.01:112,3,0	1/1:6,8:14:26.92:646,27,0	1/1:10,4:14:29.91:460,30,0	1/1:9,4:11:16.97:603,17,0	1/1:7,5:12:26.94:651,27,0	1/1:5,4:9:27.08:633,27,0	1/1:7,2:9:8.81:118,9,0	0/0:12,0:12:29.54:0,30,1347	1/1:3,1:4:6.01:140,6,0	1/1:7,8:16:21.03:958,21,0	1/1:8,11:24:54.04:1515,54,0	1/1:13,11:27:45.03:1390,45,0	1/1:7,2:7:8.32:193,8,0	1/1:9,6:15:29.44:831,29,0	1/1:9,2:11:32.69:763,33,0	1/1:3,2:6:12.01:196,12,0	1/1:7,8:15:14.87:192,15,0	0/0:12,0:12:35.32:0,35,1506	1/1:5,3:10:17.99:452,18,0	1/1:6,3:9:5.92:129,6,0	0/0:10,0:10:30.09:0,30,1434	1/1:5,3:6:18.03:435,18,0	1/1:6,4:13:30.56:860,31,0	1/1:1,1:2:6.02:157,6,0
chr10	13715782	.	GAGGGAGGAAGGGGAGAGAGAGAGAGAGAGAGA	G	9416.88	PASS	AB=0.969;AC=28;AF=0.500;AN=56;BaseQRankSum=12.182;DP=363;FS=2.348;HRun=0;HaplotypeScore=294.4785;InbreedingCoeff=-0.0157;MQ=46.87;MQ0=13;MQRankSum=-8.213;QD=38.28;ReadPosRankSum=6.386;VQSLOD=3.0713;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:66.23:0,66,4522	0/1:4,0:4:5.94:181,0,6	0/0:24,0:9:20.74:0,21,713	0/0:25,0:10:22.82:0,23,599	1/1:4,1:4:3.01:83,3,0	1/1:12,0:12:15.05:470,15,0	0/1:15,0:15:29.80:203,0,30	0/1:18,0:15:99:277,0,196	0/1:13,0:13:59.86:516,0,60	1/1:9,0:9:17.06:334,17,0	0/1:8,0:8:8.62:49,0,9	0/0:12,0:12:29.62:0,30,1498	1/1:2,0:2:3.01:79,3,0	0/1:15,1:16:9.09:837,0,9	0/1:18,4:23:12.65:1769,0,13	1/1:25,2:28:9.41:1457,9,0	0/1:13,0:11:79.59:80,0,201	0/1:13,0:13:11.47:728,0,11	0/1:10,0:10:13.44:379,0,13	0/1:5,1:6:12.18:234,0,12	0/1:17,0:17:22.20:98,0,22	0/0:12,0:12:32.64:0,33,2351	1/1:8,2:10:18.25:449,18,0	0/0:9,1:9:15.43:0,15,120	0/0:10,0:10:30.08:0,30,2106	0/1:10,0:8:38.16:262,0,38	1/1:7,2:10:25.31:851,25,0	0/1:3,0:3:28.49:82,0,28
chr10	13717215	.	TTCCAGAGG	T	23667.24	PASS	AB=0.572;AC=40;AF=0.769;AN=52;BaseQRankSum=12.219;DP=602;FS=4.500;HRun=0;HaplotypeScore=151.7926;InbreedingCoeff=0.5556;MQ=40.48;MQ0=15;MQRankSum=-12.422;QD=49.83;ReadPosRankSum=1.263;VQSLOD=4.8182;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:37:84.27:0,84,3418	1/1:0,9:9:24.08:679,24,0	./.	./.	0/1:5,17:19:92.26:866,0,92	0/1:4,23:23:80.16:1224,0,80	1/1:2,16:16:24.08:679,24,0	1/1:3,23:24:66.15:1611,66,0	1/1:5,18:20:36.12:1018,36,0	0/1:6,15:17:99:807,0,224	1/1:0,10:10:24.08:678,24,0	0/0:39,0:37:87.25:0,87,3520	1/1:4,21:23:54.05:1526,54,0	1/1:8,21:23:51.18:1442,51,0	1/1:2,34:36:81.28:2290,81,0	1/1:9,26:26:51.18:1442,51,0	1/1:3,20:20:42.14:1188,42,0	0/1:3,6:8:99:318,0,341	1/1:2,7:7:21:408,21,0	1/1:1,21:21:51.17:1394,51,0	1/1:3,20:23:27.09:712,27,0	0/0:24,0:20:54.19:0,54,2178	1/1:3,23:24:54.19:1526,54,0	1/1:5,7:9:9.03:254,9,0	0/0:21,0:19:54.17:0,54,2238	1/1:4,15:16:45.07:1146,45,0	1/1:1,22:22:57.20:1612,57,0	1/1:8,20:20:30.10:848,30,0
chr10	13717326	.	AT	A	11158.89	PASS	AB=0.960;AC=45;AF=0.804;AN=56;BaseQRankSum=8.129;DP=716;FS=1.715;HRun=10;HaplotypeScore=78.0358;InbreedingCoeff=0.8815;MQ=69.62;MQ0=5;MQRankSum=-2.199;QD=19.47;ReadPosRankSum=2.783;VQSLOD=5.7757;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:90.19:0,90,971	1/1:1,10:11:20.99:182,21,0	0/0:32,1:20:10.50:0,11,166	0/1:23,1:15:12.43:12,0,64	1/1:3,23:28:73.05:611,73,0	1/1:3,28:30:71.98:625,72,0	1/1:4,19:23:56.98:495,57,0	1/1:5,36:41:99:876,102,0	1/1:2,16:18:44.99:391,45,0	1/1:2,27:29:80.93:696,81,0	1/1:1,24:25:62.97:547,63,0	0/0:23,0:23:62.99:0,63,671	1/1:4,22:26:59.98:521,60,0	1/1:4,15:19:41.99:365,42,0	1/1:1,32:33:80.98:703,81,0	1/1:6,34:40:86.97:755,87,0	1/1:0,27:27:65.99:573,66,0	1/1:4,18:22:41.98:365,42,0	1/1:2,11:14:35.03:292,35,0	1/1:2,27:30:80.01:683,80,0	1/1:2,16:18:41.99:365,42,0	0/0:25,0:25:69.13:0,69,742	1/1:5,17:22:50.98:443,51,0	1/1:4,10:14:26.99:234,27,0	0/0:25,0:25:66.18:0,66,730	1/1:8,30:38:33.74:696,34,0	1/1:4,26:30:62.99:547,63,0	1/1:3,7:9:21:182,21,0
chr10	13718036	.	C	CACTGTCTGTCCTGTACT	20104.93	PASS	AB=1.000;AC=36;AF=0.750;AN=48;BaseQRankSum=11.616;DP=1059;FS=45.173;HRun=0;HaplotypeScore=294.9996;InbreedingCoeff=0.4716;MQ=45.83;MQ0=96;MQRankSum=-10.518;QD=26.66;ReadPosRankSum=-0.353;VQSLOD=2.4287;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:35:51.08:0,51,1525	1/1:20,0:20:24.08:954,24,0	./.	./.	./.	1/1:23,0:19:12.04:440,12,0	1/1:37,0:33:5.99:138,6,0	1/1:44,0:34:42.13:985,42,0	1/1:48,0:46:38.90:1608,39,0	1/1:37,0:30:51.06:1527,51,0	1/1:16,0:14:3.01:74,3,0	0/0:56,0:56:99:0,144,4932	1/1:14,41:60:8.58:203,9,0	1/1:44,0:41:51.17:2192,51,0	1/1:75,0:73:56.68:2531,57,0	1/1:69,0:68:75.26:3278,75,0	0/1:20,0:19:59.67:397,0,60	0/1:18,0:12:32.54:88,0,33	1/1:20,0:10:12.04:383,12,0	0/1:26,0:26:99:183,0,111	1/1:58,0:37:14.37:312,14,0	0/0:15,0:13:27.08:0,27,939	1/1:21,0:20:1.25:3,1,0	./.	0/0:24,0:18:42.13:0,42,1291	0/1:52,0:48:61.18:2622,0,61	1/1:38,0:38:30.10:1155,30,0	1/1:25,0:25:30.03:1033,30,0
chr10	13718044	.	GTCCTGTACCATGGTCTA	G	17623.10	PASS	AB=0.659;AC=20;AF=0.385;AN=52;BaseQRankSum=15.113;DP=1101;FS=17.876;HRun=0;HaplotypeScore=293.5701;InbreedingCoeff=-0.4911;MQ=43.03;MQ0=114;MQRankSum=-12.672;QD=22.92;ReadPosRankSum=7.367;VQSLOD=1.3001;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:33:60.15:0,60,2006	0/1:6,16:22:99:863,0,309	./.	./.	0/0:11,21:26:9.92:0,10,154	0/1:6,20:20:78.85:404,0,79	0/1:18,23:36:90.50:91,0,280	1/1:24,21:30:42.58:912,43,0	0/1:11,38:45:99:1383,0,147	0/1:10,25:27:24.39:1388,0,24	0/1:10,13:18:61.70:62,0,183	0/0:55,0:55:99:0,154,6707	0/1:65,0:62:88.57:89,0,536	0/1:6,41:44:99:1974,0,133	0/1:23,56:78:99:2343,0,457	0/1:14,55:68:99:2802,0,247	0/1:5,17:21:24.81:342,0,25	0/1:20,0:13:29.88:30,0,150	0/1:8,12:13:34.49:385,0,34	0/1:10,19:28:99:151,0,455	0/1:58,0:37:99:348,0,369	0/0:15,0:13:33.11:0,33,1404	0/0:6,20:24:3.01:0,3,75	0/0:34,0:33:8.98:0,9,209	0/0:23,0:16:45.15:0,45,1707	0/1:18,38:51:99:2443,0,294	0/1:12,26:37:99:845,0,311	0/1:11,14:24:99:769,0,445
chr10	13719801	.	GAACTAAAAAAAAA	G	151.20	PASS	AB=0.890;AC=4;AF=0.071;AN=56;BaseQRankSum=3.665;DP=411;FS=3.223;HRun=0;HaplotypeScore=149.7444;InbreedingCoeff=-0.1014;MQ=53.53;MQ0=5;MQRankSum=0.585;QD=1.84;ReadPosRankSum=-4.773;VQSLOD=1.2328;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:84.28:0,84,4036	0/0:4,0:4:5.18:0,5,354	0/0:21,0:8:18.98:0,19,438	0/0:15,0:7:15.04:0,15,302	0/0:15,0:15:21.07:0,21,891	0/0:13,0:13:15.05:0,15,672	0/1:9,0:9:4.12:4,0,329	0/1:22,10:32:99:174,0,1777	0/0:14,0:14:4.89:0,5,446	0/1:21,0:28:44.08:44,0,2660	0/0:13,0:11:9.41:0,9,788	0/0:19,0:19:48.16:0,48,2568	0/0:4,0:4:3.01:0,3,52	0/0:12,0:12:32.90:0,33,1382	0/0:15,0:15:18.06:0,18,784	0/0:21,0:21:36.58:0,37,1342	0/0:21,0:20:30.97:0,31,1057	0/0:13,0:13:13.75:0,14,554	0/0:9,0:9:21.07:0,21,1029	0/0:17,0:16:21.07:0,21,597	0/0:3,0:3:3.01:0,3,96	0/0:9,0:9:24.08:0,24,1292	0/0:6,0:8:18.06:0,18,898	0/0:9,0:8:18.93:0,19,658	0/0:15,0:15:45.15:0,45,2430	0/1:13,0:12:30.75:31,0,1110	0/0:18,0:18:26.93:0,27,979	0/0:12,0:12:30.10:0,30,1433
chr10	13719803	.	ACT	A	263.95	PASS	AB=0.955;AC=11;AF=0.196;AN=56;BaseQRankSum=4.285;DP=399;FS=13.380;HRun=0;HaplotypeScore=81.6865;InbreedingCoeff=-0.0759;MQ=52.27;MQ0=5;MQRankSum=-3.731;QD=1.78;ReadPosRankSum=-2.558;VQSLOD=0.2248;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,1:29:12.37:0,12,1024	0/0:2,1:3:0.79:0,1,90	0/0:19,0:8:1.49:0,1,79	0/0:13,1:6:7.54:0,8,49	0/0:15,0:15:19.31:0,19,269	0/1:12,0:12:2.55:3,0,121	0/1:9,0:9:48.05:48,0,131	0/1:29,2:31:26.13:26,0,516	0/1:12,1:13:97.92:98,0,99	0/1:26,1:27:58.77:59,0,561	0/1:12,2:12:99:103,0,141	0/0:19,0:19:48.14:0,48,721	1/1:2,0:2:3:28,3,0	0/0:12,0:12:28.03:0,28,308	0/0:15,0:15:17.08:0,17,207	0/0:20,0:20:35.97:0,36,448	0/1:20,0:19:7.89:8,0,223	0/0:12,1:13:10.03:0,10,145	0/0:7,0:7:20.58:0,21,194	0/0:17,0:16:20.29:0,20,196	0/0:3,0:3:0:0,0,0	0/0:9,0:9:24.08:0,24,388	0/1:7,1:8:21.21:21,0,140	0/0:9,0:8:17.86:0,18,228	0/0:15,0:15:41.50:0,42,620	0/1:12,0:11:4.67:5,0,302	0/0:18,0:18:9.52:0,10,233	0/0:11,1:12:14.20:0,14,265
chr10	13719805	.	T	TAAAAAAAAAAAAA	7485.89	PASS	AB=0.985;AC=48;AF=0.857;AN=56;BaseQRankSum=3.738;DP=417;FS=23.350;HRun=12;HaplotypeScore=148.4759;InbreedingCoeff=0.2733;MQ=53.10;MQ0=5;MQRankSum=-6.605;QD=19.10;ReadPosRankSum=-1.726;VQSLOD=0.6333;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:29:67.31:67,0,775	1/1:3,0:3:8.98:96,9,0	0/1:20,0:9:11.95:12,0,64	0/0:16,0:7:3.95:0,4,43	1/1:16,0:16:14.99:309,15,0	1/1:12,0:12:14.97:372,15,0	1/1:11,0:11:21.02:431,21,0	1/1:31,0:31:41.64:501,42,0	1/1:13,0:13:18.03:445,18,0	1/1:27,0:27:57.93:566,58,0	1/1:14,0:12:26.90:310,27,0	0/1:20,0:20:16.39:16,0,603	1/1:3,0:3:3.01:125,3,0	1/1:12,0:12:23.84:380,24,0	1/1:18,0:18:11.92:190,12,0	1/1:19,0:19:21.17:606,21,0	1/1:20,0:19:18.49:509,18,0	1/1:11,0:11:6.49:183,6,0	1/1:3,6:10:24.84:407,25,0	1/1:17,0:16:9.02:307,9,0	1/1:5,0:5:3.01:72,3,0	0/0:9,0:9:21.04:0,21,566	1/1:8,0:8:18.01:348,18,0	1/1:10,0:9:12.41:207,12,0	0/1:15,0:16:40.07:40,0,482	1/1:14,0:13:25.78:251,26,0	1/1:17,0:17:18.98:574,19,0	1/1:14,0:14:24.61:160,25,0
chr10	13719810	.	A	AAAAAAAAAAAA	9413.76	PASS	AB=1.000;AC=48;AF=0.857;AN=56;BaseQRankSum=5.762;DP=423;FS=20.960;HRun=7;HaplotypeScore=145.0090;InbreedingCoeff=0.2761;MQ=52.88;MQ0=5;MQRankSum=-6.653;QD=23.77;ReadPosRankSum=-3.776;VQSLOD=0.0057;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:32,0:32:66.22:66,0,711	1/1:6,0:6:10.43:151,10,0	0/1:27,0:12:12.60:13,0,80	0/0:17,0:7:4:0,4,43	1/1:15,0:15:15.04:372,15,0	1/1:13,0:13:15.02:448,15,0	1/1:9,0:9:21.02:444,21,0	1/1:25,0:26:38.76:757,39,0	1/1:13,0:13:18.06:535,18,0	1/1:27,0:27:58.06:860,58,0	1/1:14,0:12:26.89:312,27,0	0/1:20,0:20:16.46:16,0,595	1/1:3,0:3:3.01:127,3,0	1/1:11,0:11:24.50:764,24,0	1/1:8,8:22:13.46:550,13,0	1/1:16,0:16:21.54:740,22,0	1/1:21,0:20:18.48:493,18,0	1/1:5,4:13:8.77:214,9,0	1/1:5,0:5:10.39:240,10,0	1/1:18,0:17:9.02:287,9,0	1/1:5,0:5:3.01:91,3,0	0/0:10,0:10:20.88:0,21,552	1/1:8,0:8:18.01:336,18,0	1/1:9,0:8:15.48:293,15,0	0/1:17,0:17:41.43:41,0,480	1/1:13,0:12:25.83:282,26,0	1/1:19,0:19:18.53:714,19,0	1/1:14,0:14:24.73:267,25,0
chr10	13719814	.	A	AAAAAAAAGAAAG	12060.59	PASS	AB=1.000;AC=46;AF=0.821;AN=56;BaseQRankSum=4.047;DP=435;FS=18.806;HRun=0;HaplotypeScore=148.3119;InbreedingCoeff=0.6503;MQ=53.59;MQ0=4;MQRankSum=-5.965;QD=33.59;ReadPosRankSum=-2.969;VQSLOD=2.8861;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:33:40.22:40,0,1102	1/1:7,0:7:21.05:288,21,0	0/0:26,0:13:16.84:0,17,303	0/0:20,0:10:14.07:0,14,232	1/1:3,5:16:18.05:442,18,0	1/1:2,6:15:15.02:540,15,0	1/1:9,1:10:26.94:618,27,0	1/1:24,0:24:57.46:933,57,0	1/1:4,4:13:18.06:629,18,0	1/1:28,0:28:69.43:1324,69,0	1/1:15,0:13:29.89:354,30,0	0/0:21,0:21:16.53:0,17,970	1/1:0,3:5:3.01:173,3,0	1/1:9,2:11:27.50:855,27,0	1/1:13,1:14:24.03:632,24,0	1/1:2,6:17:21.54:996,22,0	1/1:7,2:24:18.48:560,18,0	1/1:7,0:8:8.06:210,8,0	1/1:7,0:8:21.03:477,21,0	1/1:1,7:20:14.94:418,15,0	1/1:0,0:6:3.01:108,3,0	0/0:9,0:9:27.08:0,27,771	1/1:9,0:9:20.76:345,21,0	1/1:8,1:8:15.47:397,15,0	0/1:17,0:17:34.58:35,0,685	1/1:13,0:12:27.90:506,28,0	1/1:2,8:21:19:870,19,0	1/1:14,0:14:29.76:311,30,0
chr10	13720044	.	AG	A	3228.29	PASS	AB=1.000;AC=45;AF=0.804;AN=56;BaseQRankSum=5.521;DP=453;FS=3.669;HRun=1;HaplotypeScore=70.6461;InbreedingCoeff=0.8137;MQ=51.45;MQ0=13;MQRankSum=-7.122;QD=9.84;ReadPosRankSum=-4.989;VQSLOD=-0.5302;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:39:78.13:0,78,926	1/1:3,0:3:5.48:28,5,0	0/0:35,1:16:32.14:0,32,281	0/1:15,0:4:19.37:19,0,62	1/1:17,0:15:32.91:222,33,0	1/1:18,0:17:35.68:231,36,0	1/1:12,1:13:23.80:134,24,0	1/1:22,0:20:35.17:213,35,0	1/1:10,0:10:19.15:99,19,0	1/1:20,0:19:37.14:245,37,0	1/1:5,0:5:10.66:66,11,0	0/0:23,0:23:49.38:0,49,533	1/1:15,0:14:25.66:139,26,0	1/1:15,0:15:22.40:129,22,0	1/1:19,0:19:37.82:214,38,0	1/1:15,1:16:34.06:206,34,0	1/1:34,0:33:39.61:329,40,0	1/1:14,1:14:26.59:164,27,0	1/1:12,0:12:20.12:140,20,0	1/1:3,0:3:5.93:44,6,0	1/1:12,0:11:9.74:45,10,0	0/0:9,0:9:17.36:0,17,187	1/1:6,0:6:14.37:97,14,0	1/1:15,0:14:16.96:138,17,0	0/0:17,0:17:42.08:0,42,480	1/1:20,1:20:42.49:298,42,0	1/1:10,0:10:18.51:104,19,0	1/1:12,0:10:19.15:109,19,0
chr10	13720335	.	A	AT	10050.89	PASS	AC=42;AF=0.778;AN=54;BaseQRankSum=4.883;DP=408;FS=1.550;HRun=0;HaplotypeScore=66.1126;InbreedingCoeff=0.8501;MQ=76.49;MQ0=3;MQRankSum=-2.421;QD=33.84;ReadPosRankSum=2.867;VQSLOD=4.4197;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:72.20:0,72,964	1/1:1,0:1:3.01:41,3,0	0/0:25,0:16:24.87:0,25,347	0/0:23,0:13:26.56:0,27,214	1/1:0,19:19:51.10:697,51,0	1/1:0,21:21:48.16:684,48,0	1/1:0,3:3:9.03:126,9,0	1/1:5,55:59:99:2107,162,0	1/1:0,3:3:6.02:86,6,0	1/1:0,14:14:39.10:505,39,0	1/1:1,4:5:9.03:129,9,0	0/0:12,0:12:36.08:0,36,473	1/1:0,5:5:9.03:129,9,0	1/1:0,6:6:15.05:214,15,0	1/1:0,8:8:21.07:300,21,0	1/1:1,5:6:12.04:169,12,0	1/1:0,33:33:84.28:1195,84,0	1/1:0,20:20:45.15:640,45,0	1/1:2,21:21:60.12:773,60,0	1/1:0,11:11:27.09:383,27,0	1/1:0,4:4:9.03:129,9,0	0/0:2,0:2:3.01:0,3,42	1/1:1,8:9:14.95:214,15,0	./.	0/0:24,0:24:72.22:0,72,949	1/1:0,12:12:36.12:506,36,0	1/1:0,11:11:18.06:256,18,0	1/1:0,23:23:54.18:769,54,0
chr10	13731205	.	GT	G	15873.29	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=9.328;DP=532;FS=18.915;HRun=2;HaplotypeScore=52.1379;InbreedingCoeff=0.9557;MQ=81.79;MQ0=0;MQRankSum=-3.209;QD=38.16;ReadPosRankSum=2.058;VQSLOD=2.9578;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,141,2149	1/1:0,7:7:21.07:294,21,0	0/0:17,0:17:25.81:0,26,640	0/0:13,0:13:39.09:0,39,559	1/1:0,10:10:30.10:417,30,0	1/1:0,18:18:54.18:755,54,0	1/1:0,28:28:66.22:922,66,0	1/1:0,30:30:90.21:1150,90,0	1/1:0,9:9:24.08:335,24,0	1/1:1,17:18:50.38:674,50,0	1/1:2,9:11:30.09:395,30,0	0/0:24,0:24:72.23:0,72,1117	1/1:0,18:18:48.16:665,48,0	1/1:0,13:13:36.12:503,36,0	1/1:0,22:22:60.20:839,60,0	1/1:0,20:20:57.19:797,57,0	1/1:0,32:32:87.29:1216,87,0	1/1:0,24:24:72.24:1005,72,0	1/1:0,13:13:36.11:485,36,0	1/1:0,11:11:33.04:436,33,0	1/1:0,30:30:69.23:965,69,0	0/0:2,0:2:6.02:0,6,96	1/1:0,18:18:48.16:671,48,0	1/1:0,36:36:99:1468,105,0	0/0:13,0:13:39.13:0,39,623	1/1:0,15:15:45.11:587,45,0	1/1:0,31:31:87.29:1212,87,0	1/1:0,2:2:6.02:84,6,0
chr10	13731615	.	G	GAAA	7964.61	PASS	AB=0.882;AC=43;AF=0.768;AN=56;BaseQRankSum=7.334;DP=408;FS=10.766;HRun=12;HaplotypeScore=130.6480;InbreedingCoeff=0.8094;MQ=40.71;MQ0=10;MQRankSum=-6.882;QD=22.89;ReadPosRankSum=-4.255;VQSLOD=1.3805;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:41.41:0,41,410	1/1:8,2:10:24.07:368,24,0	0/0:8,0:1:3.01:0,3,31	0/0:9,0:5:14.96:0,15,135	1/1:13,2:17:29.84:299,30,0	1/1:13,1:17:35.06:468,35,0	1/1:9,0:9:7.57:85,8,0	1/1:23,2:23:34:474,34,0	1/1:11,1:12:15.02:207,15,0	1/1:17,1:18:26.56:267,27,0	1/1:22,7:33:74.04:1109,74,0	0/0:11,0:12:14.78:0,15,156	1/1:9,0:9:18.94:238,19,0	1/1:16,0:14:26.88:370,27,0	1/1:9,3:12:15.05:255,15,0	1/1:9,3:13:27.04:386,27,0	0/1:13,1:15:10.79:203,0,11	1/1:15,1:16:14.99:362,15,0	1/1:11,3:13:29.99:381,30,0	1/1:17,2:19:33.23:453,33,0	1/1:6,2:8:14.96:166,15,0	0/0:6,0:6:8.97:0,9,101	1/1:10,1:11:17.92:223,18,0	1/1:7,0:7:12.04:164,12,0	0/0:5,0:5:11.94:0,12,117	1/1:12,1:13:21.37:332,21,0	1/1:21,0:21:49.23:602,49,0	1/1:11,6:21:23.45:555,23,0
chr10	13731627	.	AC	A	2261.87	PASS	AB=1.000;AC=37;AF=0.661;AN=56;BaseQRankSum=3.648;DP=417;FS=104.288;HRun=1;HaplotypeScore=105.9732;InbreedingCoeff=0.3967;MQ=46.67;MQ0=9;MQRankSum=-5.050;QD=6.61;ReadPosRankSum=-2.087;VQSLOD=-0.1915;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:20:38.39:0,38,469	1/1:12,0:11:2.86:81,3,0	0/0:14,0:6:7.57:0,8,89	0/0:14,0:8:11.87:0,12,130	1/1:25,0:25:46.26:273,46,0	1/1:21,0:20:27.83:191,28,0	0/1:3,0:3:2.13:2,0,2	1/1:30,1:30:15.81:216,16,0	1/1:7,0:7:13.10:106,13,0	1/1:10,6:16:2.35:141,2,0	1/1:33,0:31:22.59:192,23,0	0/0:10,0:10:30.02:0,30,296	1/1:9,0:9:8.83:61,9,0	0/1:15,0:13:16.90:38,0,17	1/1:7,0:7:1.45:34,1,0	1/1:13,1:13:12.84:91,13,0	0/1:14,0:14:2.56:66,0,3	1/1:15,0:13:13.41:119,13,0	1/1:18,1:18:34.34:227,34,0	0/1:17,0:17:8.77:70,0,9	1/1:7,0:6:4.49:56,4,0	0/0:6,0:6:12.03:0,12,130	0/1:8,0:8:7.28:23,0,7	0/1:7,0:6:0.07:35,0,0	0/0:10,0:10:29.75:0,30,248	0/1:20,0:20:15.28:88,0,15	1/1:25,0:23:0.32:128,0,0	1/1:17,0:16:30.14:197,30,0
chr10	13731628	.	C	CA	6904.63	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=6.833;DP=424;FS=5.652;HRun=12;HaplotypeScore=93.8450;InbreedingCoeff=0.8990;MQ=48.63;MQ0=9;MQRankSum=-7.604;QD=19.90;ReadPosRankSum=-0.578;VQSLOD=4.9583;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:19:49.89:0,50,465	1/1:4,8:11:31.61:332,32,0	0/0:16,0:7:2.67:0,3,85	0/0:15,0:9:12.42:0,12,156	1/1:10,16:26:53.63:516,54,0	1/1:13,0:22:38.41:177,38,0	1/1:1,0:3:5.68:28,6,0	1/1:18,12:29:46.37:480,46,0	1/1:3,4:7:14.24:130,14,0	1/1:6,10:16:35.67:410,36,0	1/1:12,21:31:73.30:735,73,0	0/0:10,0:10:29.49:0,29,259	1/1:3,6:9:23.65:251,24,0	1/1:7,8:13:23.27:310,23,0	1/1:1,6:7:17.82:191,18,0	1/1:9,6:14:22.83:255,23,0	1/1:9,5:15:16.72:149,17,0	1/1:9,5:13:23.76:243,24,0	1/1:10,10:19:43.40:459,43,0	1/1:8,8:18:39.03:427,39,0	1/1:3,5:7:8.96:94,9,0	0/0:6,0:6:12.02:0,12,116	1/1:2,6:8:21.01:223,21,0	1/1:3,4:6:12.02:132,12,0	0/0:10,0:10:27.04:0,27,259	1/1:8,11:20:42.14:429,42,0	1/1:11,14:23:51.19:529,51,0	1/1:4,11:14:38.69:405,39,0
chr10	13731636	.	C	CA	7083.16	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=7.106;DP=436;FS=18.354;HRun=8;HaplotypeScore=93.6949;InbreedingCoeff=0.8058;MQ=51.54;MQ0=7;MQRankSum=-6.881;QD=19.68;ReadPosRankSum=0.100;VQSLOD=3.4853;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:41.98:0,42,384	1/1:4,8:11:26.13:257,26,0	0/0:17,0:8:5.30:0,5,144	0/0:15,0:9:1.50:0,2,146	1/1:10,18:28:63.21:606,63,0	1/1:9,16:24:42.41:427,42,0	1/1:1,2:3:3.48:33,3,0	1/1:20,10:29:8.04:585,8,0	1/1:2,4:6:14.78:147,15,0	1/1:8,10:18:42.05:469,42,0	1/1:13,19:32:73.10:700,73,0	0/0:10,0:10:20.99:0,21,189	1/1:7,4:11:23.07:227,23,0	1/1:9,6:13:28.24:280,28,0	1/1:2,6:8:20.77:208,21,0	1/1:7,7:13:30.07:327,30,0	1/1:7,8:15:12.93:122,13,0	1/1:7,9:14:4.59:207,5,0	1/1:7,17:23:34.86:532,35,0	1/1:6,12:19:35.11:356,35,0	1/1:2,6:7:3.48:35,3,0	0/0:7,0:7:15.01:0,15,137	1/1:2,6:8:20.80:187,21,0	1/1:4,3:6:10.27:101,10,0	0/0:10,0:10:30.02:0,30,275	1/1:10,9:20:42.19:433,42,0	1/1:15,11:24:36.07:463,36,0	1/1:4,10:13:38.89:380,39,0
chr10	13732559	.	T	TC	2884.06	PASS	AB=1.000;AC=43;AF=0.796;AN=54;BaseQRankSum=4.933;DP=383;FS=6.347;HRun=1;HaplotypeScore=101.5098;InbreedingCoeff=0.7431;MQ=33.77;MQ0=32;MQRankSum=-4.574;QD=9.58;ReadPosRankSum=-2.046;VQSLOD=0.4801;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:35:53.03:0,53,359	1/1:2,0:2:2.97:20,3,0	0/0:4,0:1:0.47:0,0,1	./.	1/1:12,0:11:5.91:38,6,0	1/1:12,0:12:32.64:218,33,0	1/1:2,14:15:5.95:42,6,0	1/1:13,0:13:17.83:121,18,0	1/1:9,0:9:14.77:94,15,0	1/1:18,0:18:40.77:265,41,0	1/1:7,0:6:13.62:79,14,0	0/0:14,0:12:20.71:0,21,144	1/1:9,0:8:14.77:94,15,0	0/1:8,0:8:2.06:69,0,2	1/1:21,0:21:26.57:167,27,0	1/1:12,0:12:20.28:120,20,0	1/1:18,0:16:29.70:210,30,0	1/1:13,0:13:20.86:151,21,0	1/1:24,0:18:34.05:233,34,0	1/1:10,0:10:26.59:179,27,0	1/1:11,0:9:8.10:43,8,0	0/0:8,0:8:8.92:0,9,65	1/1:11,0:10:13.44:77,13,0	1/1:20,0:16:27.71:163,28,0	0/0:11,0:8:12.71:0,13,109	1/1:15,0:14:28.46:180,28,0	1/1:22,0:21:44.39:306,44,0	1/1:17,0:15:26.62:172,27,0
chr10	13732634	.	CTTCCACACCAT	C	10140.44	PASS	AC=38;AF=0.760;AN=50;BaseQRankSum=10.029;DP=198;FS=35.012;HRun=0;HaplotypeScore=86.7757;InbreedingCoeff=0.8068;MQ=55.48;MQ0=0;MQRankSum=-9.778;QD=85.21;ReadPosRankSum=-1.113;VQSLOD=2.8410;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:54.18:0,54,2989	./.	0/0:11,0:8:21.07:0,21,1113	0/0:6,0:5:15.05:0,15,798	1/1:3,3:6:3.01:109,3,0	1/1:0,2:2:6.02:217,6,0	1/1:2,2:4:6.02:218,6,0	./.	1/1:0,6:6:18.06:653,18,0	1/1:2,6:8:18.06:653,18,0	1/1:0,1:1:3.01:47,3,0	0/0:12,0:12:36.12:0,36,1946	1/1:2,3:5:9.03:326,9,0	1/1:0,5:5:15.05:544,15,0	1/1:1,10:11:30.10:1088,30,0	1/1:0,5:5:15.05:544,15,0	1/1:0,6:6:18.06:580,18,0	1/1:0,7:7:21.07:762,21,0	1/1:1,1:2:3.01:109,3,0	1/1:2,2:4:6.02:218,6,0	1/1:2,9:11:27.09:811,27,0	0/0:13,0:13:36.12:0,36,1978	1/1:0,4:4:12.04:435,12,0	1/1:0,9:9:27.09:979,27,0	0/0:11,0:11:30.10:0,30,1432	1/1:4,8:12:24.08:870,24,0	1/1:2,9:11:27.09:979,27,0	./.
chr10	13733384	.	TA	T	7158.40	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=11.794;DP=522;FS=1.282;HRun=1;HaplotypeScore=92.9575;InbreedingCoeff=0.9431;MQ=62.94;MQ0=1;MQRankSum=-7.700;QD=17.99;ReadPosRankSum=-6.762;VQSLOD=2.9557;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,114,1386	1/1:7,2:9:21.86:183,22,0	0/0:15,1:15:42.04:0,42,484	0/0:15,1:13:19.76:0,20,341	1/1:12,11:23:64.39:540,64,0	1/1:0,22:21:20.92:180,21,0	1/1:6,7:12:32.94:281,33,0	1/1:16,8:22:56.76:475,57,0	1/1:11,5:15:44.84:393,45,0	1/1:12,12:21:65.60:553,66,0	1/1:7,6:12:23.39:184,23,0	0/0:22,0:22:63.12:0,63,784	1/1:6,0:6:2.39:66,2,0	1/1:14,2:16:47.89:402,48,0	1/1:12,6:18:47.78:379,48,0	1/1:0,23:22:20.93:190,21,0	1/1:26,9:34:75.70:691,76,0	1/1:0,20:20:8.97:83,9,0	1/1:8,6:12:32.67:306,33,0	1/1:0,16:16:27.28:220,27,0	1/1:6,5:11:30.94:225,31,0	0/0:15,0:15:45.14:0,45,583	1/1:11,2:13:14.62:112,15,0	1/1:17,8:25:47.28:427,47,0	0/0:16,0:16:48.05:0,48,555	1/1:15,11:25:68.20:600,68,0	1/1:12,6:18:41.50:363,41,0	1/1:6,7:12:32.97:304,33,0
chr10	13733390	.	TTA	T	5986.66	PASS	AB=1.000;AC=43;AF=0.768;AN=56;BaseQRankSum=9.596;DP=524;FS=10.758;HRun=0;HaplotypeScore=105.3809;InbreedingCoeff=0.8448;MQ=64.00;MQ0=1;MQRankSum=-6.500;QD=15.12;ReadPosRankSum=-5.918;VQSLOD=2.5535;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,111,1685	1/1:8,0:8:6.27:137,6,0	0/0:20,0:18:34.47:0,34,514	0/0:19,0:15:30.75:0,31,468	1/1:21,2:23:52.69:400,53,0	1/1:21,2:22:23.98:275,24,0	1/1:10,3:12:31.73:257,32,0	1/1:26,0:24:49.12:450,49,0	1/1:16,0:15:36.65:227,37,0	1/1:23,0:20:56.07:443,56,0	1/1:11,1:11:8.01:113,8,0	0/0:24,0:24:72.17:0,72,1072	0/1:5,0:5:36.80:37,0,39	1/1:13,1:14:41.87:354,42,0	1/1:17,2:19:51.06:397,51,0	1/1:22,1:22:23.27:235,23,0	1/1:34,1:34:40.04:550,40,0	1/1:21,0:21:11.99:90,12,0	1/1:12,0:10:25.53:207,26,0	1/1:16,0:16:20.91:149,21,0	1/1:11,0:11:29.30:216,29,0	0/0:14,0:14:42.12:0,42,648	1/1:14,0:14:11.63:99,12,0	1/1:24,0:24:30.83:348,31,0	0/0:13,0:13:36.11:0,36,597	1/1:23,2:24:52.50:482,53,0	1/1:18,0:18:8.58:264,9,0	1/1:15,0:14:31.36:257,31,0
chr10	13733391	.	TA	T	7044.70	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=10.737;DP=515;FS=4.228;HRun=1;HaplotypeScore=92.0286;InbreedingCoeff=0.9451;MQ=63.27;MQ0=1;MQRankSum=-6.376;QD=18.16;ReadPosRankSum=-5.711;VQSLOD=3.3064;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,111,1322	1/1:8,0:8:18.86:154,19,0	0/0:18,1:17:33.95:0,34,421	0/0:19,0:15:30.62:0,31,370	1/1:19,4:23:63.61:519,64,0	1/1:19,4:22:23.93:198,24,0	1/1:11,2:12:32.80:251,33,0	1/1:21,4:24:59.77:503,60,0	1/1:16,0:15:44.87:396,45,0	1/1:19,4:20:62.72:545,63,0	1/1:9,2:10:21.31:176,21,0	0/0:24,0:24:72.16:0,72,856	1/1:5,0:5:1.91:56,2,0	1/1:13,1:14:41.85:341,42,0	1/1:19,1:20:54.65:427,55,0	1/1:19,4:22:23.94:217,24,0	1/1:31,3:33:79.21:708,79,0	1/1:18,2:20:13.74:106,14,0	1/1:9,3:10:29.96:285,30,0	1/1:13,2:15:23.85:203,24,0	1/1:7,3:10:29.75:230,30,0	0/0:14,0:14:42.11:0,42,515	1/1:0,14:14:11.62:86,12,0	1/1:22,1:23:47.08:420,47,0	0/0:12,0:12:36.12:0,36,465	1/1:19,4:22:62.73:544,63,0	1/1:15,3:18:40.84:352,41,0	1/1:12,3:14:36.44:327,36,0
chr10	13734094	.	TAC	T	85.82	PASS	AB=0.778;AC=5;AF=0.096;AN=52;BaseQRankSum=-0.422;DP=593;FS=7.984;HRun=0;HaplotypeScore=106.1874;InbreedingCoeff=0.3224;MQ=60.98;MQ0=24;MQRankSum=2.602;QD=1.13;ReadPosRankSum=0.036;VQSLOD=0.9730;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:25,9:35:26.53:107,0,27	0/0:6,0:10:8:0,8,52	./.	./.	0/0:16,0:16:3.01:0,3,32	0/0:17,0:16:17.33:0,17,133	0/0:21,0:21:2.98:0,3,27	0/0:18,0:17:5.94:0,6,41	0/0:21,0:21:5.75:0,6,48	0/0:18,0:18:24.06:0,24,285	0/0:14,0:13:5.99:0,6,51	0/0:14,0:14:0.47:0,0,1	0/0:16,0:15:9.03:0,9,110	0/0:20,0:19:6.47:0,6,53	0/0:17,0:16:3:0,3,26	0/0:20,0:25:6.01:0,6,69	0/0:15,0:17:8.96:0,9,70	0/0:11,0:11:6.49:0,6,77	0/0:24,0:24:21.85:0,22,198	0/0:15,0:15:14.94:0,15,153	0/0:25,0:25:5.73:0,6,65	1/1:19,0:19:3:32,3,0	0/0:23,0:21:8.71:0,9,92	0/0:31,0:32:23.79:0,24,245	1/1:20,1:22:7.89:53,8,0	0/0:21,0:20:36.87:0,37,354	0/0:21,0:21:26.89:0,27,234	0/0:9,0:9:9.49:0,9,94
chr10	13734590	.	AG	A	23795.36	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=9.544;DP=875;FS=2.855;HRun=2;HaplotypeScore=95.5912;InbreedingCoeff=0.9990;MQ=78.25;MQ0=0;MQRankSum=-4.897;QD=35.89;ReadPosRankSum=1.308;VQSLOD=5.1965;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,165,2426	1/1:0,8:8:21.07:273,21,0	0/0:25,0:25:69.18:0,69,976	0/0:27,0:27:69.35:0,69,1023	1/1:1,24:25:54.17:695,54,0	1/1:0,31:31:84.27:1091,84,0	1/1:2,30:32:90.29:1169,90,0	1/1:0,41:41:99:1464,114,0	1/1:0,30:30:81.26:1052,81,0	1/1:1,18:19:57.13:719,57,0	1/1:1,21:22:57.19:740,57,0	0/0:49,0:49:99:0,147,2203	1/1:0,39:39:99:1519,117,0	1/1:0,32:32:96.31:1247,96,0	1/1:1,47:48:99:1636,126,0	1/1:1,53:54:99:2065,160,0	1/1:0,36:36:99:1402,108,0	1/1:1,27:28:78.25:1013,78,0	1/1:2,13:15:39.13:505,39,0	1/1:0,20:20:54.18:701,54,0	1/1:0,54:54:99:1948,150,0	0/0:24,0:24:72.19:0,72,1034	1/1:0,27:27:66.21:857,66,0	1/1:0,34:34:99:1286,99,0	0/0:32,0:32:87.29:0,87,1304	1/1:0,31:31:90.29:1169,90,0	1/1:0,27:27:69.22:896,69,0	1/1:0,10:9:27.09:351,27,0
chr10	13735530	.	TTGGG	T	4168.71	PASS	AB=0.959;AC=21;AF=0.375;AN=56;BaseQRankSum=-5.547;DP=553;FS=18.033;HRun=0;HaplotypeScore=257.0169;InbreedingCoeff=-0.5954;MQ=49.26;MQ0=4;MQRankSum=-9.643;QD=10.05;ReadPosRankSum=-5.174;VQSLOD=0.8493;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:26:75.24:0,75,1818	0/1:5,0:5:40.46:40,0,60	0/0:28,0:19:48.69:0,49,1060	0/0:17,0:10:18.23:0,18,342	0/1:34,0:34:99:468,0,306	0/1:9,7:15:99:125,0,157	0/1:10,1:11:99:135,0,101	0/1:17,0:14:18.17:18,0,237	0/1:24,0:23:99:149,0,238	0/1:21,0:20:99:247,0,202	0/1:18,0:18:99:148,0,129	0/0:17,0:17:51.16:0,51,1180	0/0:14,0:14:35.72:0,36,306	0/1:14,0:14:59.30:59,0,198	0/1:22,0:20:99:236,0,230	0/1:27,0:26:99:370,0,254	0/1:14,0:14:99:219,0,122	0/1:12,1:12:99:131,0,108	0/1:30,0:27:35.51:36,0,361	0/1:37,0:37:99:420,0,387	0/1:3,1:3:14.43:46,0,14	0/0:17,0:17:51.18:0,51,1197	0/1:25,0:26:99:343,0,259	0/1:12,0:11:16.99:17,0,125	0/0:17,0:17:51.18:0,51,1229	0/1:25,3:28:99:540,0,212	0/1:30,1:31:99:363,0,353	0/1:10,0:10:57.81:58,0,132
chr10	13735531	.	TG	T	8126.01	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=13.910;DP=555;FS=7.663;HRun=3;HaplotypeScore=217.4269;InbreedingCoeff=0.9669;MQ=49.31;MQ0=4;MQRankSum=-12.232;QD=19.08;ReadPosRankSum=1.368;VQSLOD=3.5501;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:81.20:0,81,1040	1/1:2,2:5:14.70:139,15,0	0/0:28,0:19:45.93:0,46,511	0/0:18,0:11:17.81:0,18,186	1/1:12,13:34:89.60:660,90,0	1/1:11,5:15:30.96:250,31,0	1/1:4,2:11:17.41:136,17,0	1/1:4,7:13:31.73:293,32,0	1/1:4,11:23:57.42:496,57,0	1/1:4,7:20:48.35:350,48,0	1/1:4,8:18:44.79:380,45,0	0/0:19,0:19:51.11:0,51,648	1/1:8,6:14:24.43:284,24,0	1/1:1,8:14:28.96:278,29,0	1/1:1,12:20:55.47:499,55,0	1/1:7,6:26:65.27:452,65,0	1/1:6,2:14:21.25:213,21,0	1/1:4,5:12:28.34:212,28,0	1/1:17,7:26:62.88:510,63,0	1/1:6,17:36:98.04:828,98,0	1/1:2,1:3:5.80:40,6,0	0/0:17,0:17:51.09:0,51,654	1/1:12,7:26:65.77:520,66,0	1/1:3,7:11:16.07:156,16,0	0/0:17,0:17:51.14:0,51,666	1/1:10,5:28:59.79:471,60,0	1/1:5,16:31:87.19:774,87,0	1/1:4,3:10:25.02:185,25,0
chr10	13735533	.	G	GTTTTTTT	19452.13	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=14.065;DP=550;FS=5.113;HRun=0;HaplotypeScore=239.5821;InbreedingCoeff=0.9703;MQ=48.70;MQ0=4;MQRankSum=-11.879;QD=46.54;ReadPosRankSum=1.135;VQSLOD=4.3059;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:87.26:0,87,1958	1/1:5,0:5:15.05:267,15,0	0/0:29,0:19:48.09:0,48,723	0/0:19,0:11:16.86:0,17,233	1/1:30,5:34:99:1812,99,0	1/1:14,2:15:33.10:734,33,0	1/1:9,0:9:18.04:213,18,0	1/1:15,0:12:32.11:461,32,0	1/1:21,3:23:60.18:1193,60,0	1/1:19,0:18:51.06:690,51,0	1/1:17,1:19:47.17:877,47,0	0/0:18,0:18:54.16:0,54,1225	1/1:8,4:12:35.32:891,35,0	1/1:13,1:14:33.06:641,33,0	1/1:22,0:20:57.17:1029,57,0	1/1:25,2:26:69.15:1326,69,0	1/1:13,0:13:35.07:366,35,0	1/1:13,0:12:30.01:546,30,0	1/1:25,3:25:66.16:1274,66,0	1/1:34,2:36:99:1791,105,0	1/1:4,0:3:6.01:59,6,0	0/0:17,0:17:51.11:0,51,1079	1/1:22,2:25:72.15:1299,72,0	1/1:12,0:11:19.29:380,19,0	0/0:19,0:19:51.16:0,51,1151	1/1:27,1:28:80.20:1269,80,0	1/1:30,1:31:90.26:1693,90,0	1/1:7,3:10:25.64:639,26,0
chr10	13735534	.	G	GTTTTTTTT	17595.28	PASS	AB=1.000;AC=45;AF=0.804;AN=56;BaseQRankSum=12.858;DP=556;FS=1.923;HRun=7;HaplotypeScore=262.2814;InbreedingCoeff=0.8170;MQ=46.89;MQ0=4;MQRankSum=-12.584;QD=39.63;ReadPosRankSum=2.079;VQSLOD=-0.2349;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:81.18:0,81,1694	1/1:5,0:5:2.31:165,2,0	0/0:28,0:18:15.23:0,15,387	0/1:18,0:10:4.09:4,0,55	1/1:29,5:33:76.11:1756,76,0	1/1:14,0:15:29.98:669,30,0	1/1:9,0:9:14.37:184,14,0	1/1:17,0:14:7.92:200,8,0	1/1:21,1:23:56.91:1046,57,0	1/1:19,0:18:45.53:774,46,0	1/1:18,0:19:50.88:876,51,0	0/0:18,0:18:51.11:0,51,1069	1/1:11,1:12:31.87:676,32,0	1/1:15,0:15:18.62:488,19,0	1/1:22,0:20:39.36:847,39,0	1/1:26,2:26:63.14:1338,63,0	1/1:12,0:12:9.63:322,10,0	1/1:14,0:13:23.86:474,24,0	1/1:24,2:24:50.94:1025,51,0	1/1:34,2:36:97.49:1520,97,0	1/1:4,0:3:3.01:52,3,0	0/0:17,0:17:50:0,50,829	1/1:23,2:25:49.67:1213,50,0	1/1:13,0:12:24.46:398,24,0	0/0:19,0:19:48:0,48,937	1/1:30,0:31:86.94:1422,87,0	1/1:32,1:32:88.36:1556,88,0	1/1:8,3:10:24.02:589,24,0
chr10	13737200	.	G	GAA	6724.34	PASS	AB=0.702;AC=47;AF=0.839;AN=56;BaseQRankSum=-1.329;DP=556;FS=4.651;HRun=13;HaplotypeScore=77.6636;InbreedingCoeff=0.1515;MQ=66.11;MQ0=1;MQRankSum=-0.974;QD=12.62;ReadPosRankSum=1.277;VQSLOD=3.9085;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:9,0:35:29.97:114,0,30	1/1:4,6:10:9.92:124,10,0	0/1:20,0:16:22.32:22,0,23	0/0:8,0:7:2.67:0,3,12	0/1:7,11:18:1.36:169,0,1	1/1:5,11:17:15.90:227,16,0	1/1:6,16:25:36.59:407,37,0	1/1:13,9:29:31.79:349,32,0	1/1:3,11:15:23.56:293,24,0	1/1:10,8:18:0.58:244,1,0	1/1:10,10:23:8.86:357,9,0	0/0:6,0:15:2.75:0,3,70	1/1:5,9:14:10.28:125,10,0	1/1:5,5:11:5.51:50,6,0	1/1:3,16:22:5.12:272,5,0	1/1:5,14:22:12.60:420,13,0	1/1:5,24:36:74.08:821,74,0	1/1:5,14:23:14.18:387,14,0	1/1:7,8:16:38.46:401,38,0	1/1:5,13:23:43.78:339,44,0	1/1:4,7:12:17.54:202,18,0	0/1:11,0:24:5.49:40,0,5	1/1:4,15:21:26.37:317,26,0	1/1:3,18:26:37.57:409,38,0	0/1:5,0:10:13.45:22,0,13	1/1:9,9:21:30.25:265,30,0	1/1:3,15:20:17.51:212,18,0	1/1:7,2:19:14.02:136,14,0
chr10	13739361	.	A	ATT	4034.54	PASS	AB=0.802;AC=45;AF=0.804;AN=56;BaseQRankSum=-2.192;DP=612;FS=0.000;HRun=17;HaplotypeScore=96.5377;InbreedingCoeff=-0.2517;MQ=73.47;MQ0=4;MQRankSum=-2.736;QD=6.59;ReadPosRankSum=-2.738;VQSLOD=-0.5858;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:21,1:41:75.26:75,0,94	1/1:4,1:9:8.22:54,8,0	0/1:37,0:20:9.80:10,0,40	0/1:22,0:13:12.48:12,0,41	0/1:16,3:20:9.46:145,0,9	1/1:9,1:25:17.40:159,17,0	1/1:7,7:15:14.99:154,15,0	0/1:25,9:43:6.31:391,0,6	1/1:7,5:14:8.36:65,8,0	1/1:16,4:25:11.03:227,11,0	1/1:7,2:14:16.07:115,16,0	0/1:9,0:13:24.96:102,0,25	1/1:5,9:16:9.03:106,9,0	0/1:14,1:17:16.69:73,0,17	0/1:15,3:25:33.96:157,0,34	1/1:10,3:23:0.42:129,0,0	0/1:8,10:22:0.76:149,0,1	1/1:8,0:12:8.21:124,8,0	1/1:16,0:22:20.34:189,20,0	1/1:8,9:19:34.12:314,34,0	1/1:17,1:21:0.18:130,0,0	1/1:7,0:15:7.11:27,7,0	1/1:7,5:20:27.45:243,27,0	1/1:10,2:18:6.36:139,6,0	0/1:15,1:27:67.47:67,0,82	1/1:8,5:17:21:225,21,0	0/1:22,2:30:18.69:111,0,19	1/1:6,6:26:40.17:343,40,0
chr10	13740454	.	TC	T	254.67	PASS	AB=0.644;AC=25;AF=0.543;AN=46;BaseQRankSum=6.538;DP=81;FS=101.240;HRun=2;HaplotypeScore=24.0424;InbreedingCoeff=0.2297;MQ=53.34;MQ0=0;MQRankSum=-4.042;QD=5.42;ReadPosRankSum=0.505;VQSLOD=-0.5970;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,1:1:3:29,3,0	./.	./.	0/0:2,0:2:6.02:0,6,89	1/1:1,2:3:1.25:3,1,0	1/1:0,2:2:5.27:21,5,0	0/1:5,4:9:10.73:11,0,95	./.	0/0:0,3:3:0:0,0,0	0/1:2,5:7:27.19:97,0,27	0/0:0,1:1:0:0,0,0	0/1:1,3:4:31.94:32,0,36	1/1:0,2:2:4.82:17,5,0	1/1:0,3:3:4.39:40,4,0	1/1:0,2:2:2.69:12,3,0	./.	0/1:3,1:4:1.81:2,0,122	0/0:6,0:6:18.06:0,18,269	0/0:2,0:2:6.02:0,6,90	1/1:0,1:1:0.47:1,0,0	0/0:8,0:8:14.99:0,15,200	0/1:1,3:4:35.98:48,0,36	1/1:0,1:1:2.68:11,3,0	0/0:8,0:8:21.07:0,21,310	0/0:1,1:2:2.97:0,3,20	1/1:0,3:3:8.07:40,8,0	./.	1/1:0,1:1:3:25,3,0
chr10	13742539	.	TG	T	1567.36	PASS	AB=1.000;AC=33;AF=0.589;AN=56;BaseQRankSum=15.719;DP=554;FS=1.167;HRun=1;HaplotypeScore=114.2152;InbreedingCoeff=0.1321;MQ=76.06;MQ0=0;MQRankSum=-1.212;QD=3.65;ReadPosRankSum=7.923;VQSLOD=-0.0340;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,117,1734	1/1:12,0:12:20.60:66,21,0	0/0:13,0:13:24.89:0,25,304	0/0:10,0:10:18.01:0,18,219	0/1:13,0:13:18.42:114,0,18	1/1:24,0:24:14.60:89,15,0	0/1:27,0:27:49:74,0,49	0/1:16,0:16:19.51:20,0,54	1/1:21,0:21:31.71:105,32,0	0/1:12,0:12:17.48:17,0,42	1/1:8,1:9:9.33:24,9,0	0/0:25,0:25:72.22:0,72,1104	0/1:10,0:10:26.16:37,0,26	1/1:28,0:28:3.94:123,4,0	0/1:19,0:19:29.56:30,0,66	0/1:27,0:27:26.14:66,0,26	0/1:41,0:41:65.55:114,0,66	1/1:18,0:18:30.70:93,31,0	0/1:13,0:13:2.25:2,0,67	1/1:9,1:10:3.74:79,4,0	1/1:30,1:31:2.12:126,2,0	0/0:13,0:13:39.12:0,39,557	1/1:21,2:23:39.62:222,40,0	0/1:21,0:21:10.87:73,0,11	0/0:24,0:24:72.17:0,72,1011	1/1:24,0:24:0.19:62,0,0	1/1:20,2:22:39.91:202,40,0	0/1:8,0:8:10.52:11,0,14
chr10	13742540	.	GC	G	9444.37	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=11.410;DP=553;FS=1.321;HRun=8;HaplotypeScore=89.2976;InbreedingCoeff=0.9832;MQ=76.80;MQ0=0;MQRankSum=-2.581;QD=22.22;ReadPosRankSum=3.592;VQSLOD=5.2431;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,108,1277	1/1:0,12:12:33.05:319,33,0	0/0:14,0:14:23.36:0,23,242	0/0:10,0:10:12.04:0,12,142	1/1:5,8:13:30.04:287,30,0	1/1:1,23:24:60.09:578,60,0	1/1:5,21:26:54.08:521,54,0	1/1:1,15:16:35.96:323,36,0	1/1:0,21:21:48.08:463,48,0	1/1:1,11:12:30.04:289,30,0	1/1:2,7:9:18.03:174,18,0	0/0:26,0:26:72.21:0,72,856	1/1:2,8:10:21.03:203,21,0	1/1:3,24:27:69.11:665,69,0	1/1:6,13:19:39.05:373,39,0	1/1:4,23:27:60.08:579,60,0	1/1:6,35:41:90.14:869,90,0	1/1:1,17:18:51.08:492,51,0	1/1:2,10:12:20.98:193,21,0	1/1:2,8:10:27.04:257,27,0	1/1:3,27:30:72.11:695,72,0	0/0:13,0:13:39.12:0,39,467	1/1:4,19:23:51.04:491,51,0	1/1:2,19:21:42.07:405,42,0	0/0:24,0:24:60.18:0,60,724	1/1:1,22:23:69.11:666,69,0	1/1:6,17:23:51.07:485,51,0	1/1:1,7:8:12.02:116,12,0
chr10	13742548	.	CA	C	1995.38	PASS	AB=0.979;AC=35;AF=0.625;AN=56;BaseQRankSum=14.522;DP=566;FS=3.157;HRun=1;HaplotypeScore=121.0176;InbreedingCoeff=0.2733;MQ=77.88;MQ0=0;MQRankSum=-0.530;QD=4.58;ReadPosRankSum=7.570;VQSLOD=0.4010;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,125,1472	1/1:12,0:12:19.25:53,19,0	0/0:17,1:18:10.37:0,10,291	0/0:9,0:9:17.92:0,18,150	1/1:11,3:14:2.81:127,3,0	1/1:24,0:24:41.19:144,41,0	0/1:23,2:25:3.93:104,0,4	0/1:19,0:19:30.45:30,0,50	1/1:21,0:21:33.75:118,34,0	0/1:13,0:13:17.98:18,0,38	1/1:8,1:9:11.28:33,11,0	0/0:25,0:25:75.09:0,75,892	1/1:8,0:8:15.04:55,15,0	1/1:24,2:26:51.59:222,52,0	1/1:13,2:15:25.05:120,25,0	1/1:24,1:25:42.32:164,42,0	0/1:42,0:42:71.02:114,0,71	0/1:19,1:20:9.01:82,0,9	0/1:12,0:12:21.57:22,0,37	0/1:13,1:14:56.69:102,0,57	1/1:30,1:31:6.55:102,7,0	0/0:14,0:14:42.02:0,42,476	1/1:22,2:24:40.48:223,40,0	0/1:22,0:22:8.50:70,0,8	0/0:21,0:21:60.16:0,60,747	1/1:24,1:25:4.62:77,5,0	1/1:23,3:26:4.55:192,5,0	0/1:9,0:9:12.06:12,0,21
chr10	13743478	.	A	ATGTG	2314.94	PASS	AB=0.886;AC=44;AF=0.880;AN=50;BaseQRankSum=-0.775;DP=622;FS=2.393;HRun=0;HaplotypeScore=112.4381;InbreedingCoeff=-0.0385;MQ=61.47;MQ0=19;MQRankSum=0.120;QD=4.16;ReadPosRankSum=0.251;VQSLOD=2.3110;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:27:2.74:12,3,0	1/1:7,0:5:2.94:18,3,0	./.	./.	0/1:15,8:23:0:0,0,0	1/1:18,0:18:2.99:24,3,0	1/1:20,4:20:6.02:140,6,0	1/1:26,0:20:7.62:37,8,0	1/1:12,0:19:3.01:52,3,0	1/1:22,0:22:8.03:44,8,0	1/1:6,0:7:2.74:12,3,0	1/1:20,0:22:5.75:79,6,0	0/1:9,5:14:12.15:64,0,12	1/1:22,0:22:11.55:203,12,0	0/1:29,0:27:18.57:199,0,19	1/1:19,2:21:18.01:291,18,0	1/1:18,0:30:5.75:82,6,0	1/1:17,10:26:6.01:95,6,0	1/1:15,0:13:9:104,9,0	1/1:12,0:11:6.01:77,6,0	1/1:57,0:55:27.44:317,27,0	0/1:15,3:18:0.26:0,0,0	0/1:17,0:17:16.17:16,0,34	1/1:26,1:40:7.28:99,7,0	1/1:11,0:11:8.99:123,9,0	0/1:31,0:30:6.04:211,0,6	1/1:11,0:11:6.02:122,6,0	./.
chr10	13743668	.	G	GA	4802.27	PASS	AB=0.729;AC=39;AF=0.696;AN=56;BaseQRankSum=5.551;DP=493;FS=14.492;HRun=10;HaplotypeScore=81.1233;InbreedingCoeff=0.5847;MQ=54.52;MQ0=6;MQRankSum=-6.301;QD=13.09;ReadPosRankSum=-1.384;VQSLOD=2.8626;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,1:35:53.49:0,53,638	1/1:4,7:11:21.05:220,21,0	0/0:21,1:15:23.40:0,23,188	0/0:18,0:13:22.59:0,23,181	1/1:9,16:24:36.98:385,37,0	1/1:3,9:12:21.03:214,21,0	1/1:5,9:13:11.29:310,11,0	1/1:19,22:40:41.50:634,41,0	1/1:4,6:9:21.05:224,21,0	1/1:16,11:25:27.07:288,27,0	0/1:5,6:10:0.60:191,0,1	0/0:16,0:15:32.92:0,33,266	0/1:6,6:11:27.99:138,0,28	1/1:8,6:13:17.83:191,18,0	1/1:7,4:10:14.92:136,15,0	1/1:6,5:9:1.30:144,1,0	1/1:10,15:24:42.09:436,42,0	0/1:13,6:16:20.78:127,0,21	0/1:15,6:18:5.71:144,0,6	1/1:11,7:16:24.87:235,25,0	1/1:2,5:7:9.02:95,9,0	0/0:19,0:19:32.86:0,33,270	1/1:14,3:17:18.03:181,18,0	1/1:7,2:8:6.02:63,6,0	0/0:16,0:15:41.94:0,42,344	0/1:20,7:25:0.56:200,0,1	1/1:7,3:9:9.01:85,9,0	1/1:6,5:11:15.04:159,15,0
chr10	13745242	.	AGTGTGTGTGT	A	4864.99	PASS	AB=0.862;AC=29;AF=0.518;AN=56;BaseQRankSum=-3.579;DP=393;FS=16.639;HRun=0;HaplotypeScore=143.2511;InbreedingCoeff=0.0167;MQ=48.98;MQ0=11;MQRankSum=1.060;QD=16.49;ReadPosRankSum=5.074;VQSLOD=2.5281;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:19:33.56:0,34,1112	1/1:6,0:6:10.28:260,10,0	0/0:17,0:7:6.02:0,6,161	0/0:16,0:9:3.01:0,3,123	0/1:7,2:16:0.21:15,0,0	0/1:10,1:10:14.43:129,0,14	1/1:10,3:14:11.69:291,12,0	1/1:12,1:13:9.03:232,9,0	0/1:13,1:14:17.52:271,0,18	0/1:20,0:18:99:307,0,105	1/1:10,1:11:5.81:73,6,0	0/0:16,0:15:33.58:0,34,1276	0/1:13,1:15:55.75:390,0,56	0/1:12,1:14:58.31:85,0,58	0/1:16,2:19:63.81:252,0,64	0/1:16,2:22:4.40:723,0,4	0/1:16,3:19:99:171,0,132	1/1:12,0:11:4.65:257,5,0	0/1:12,0:12:21.03:262,0,21	0/1:15,0:14:13.89:65,0,14	0/0:12,0:11:0.47:0,0,1	0/0:9,0:9:21.07:0,21,781	1/1:9,0:8:5.84:166,6,0	0/1:8,1:10:0.03:0,0,0	0/0:8,0:7:12.04:0,12,489	1/1:10,4:13:3.67:500,4,0	0/1:13,0:13:99:162,0,183	1/1:7,1:8:12.02:253,12,0
chr10	13745264	.	T	TGA	417.63	PASS	AB=0.960;AC=18;AF=0.346;AN=52;BaseQRankSum=2.638;DP=424;FS=46.205;HRun=0;HaplotypeScore=148.7523;InbreedingCoeff=-0.1966;MQ=38.24;MQ0=17;MQRankSum=-2.085;QD=1.57;ReadPosRankSum=-1.665;VQSLOD=0.5002;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:23:24.53:0,25,358	0/0:6,0:6:3.24:0,3,8	0/0:8,0:2:6.02:0,6,86	0/0:9,0:1:3.01:0,3,45	0/1:24,0:24:8.78:9,0,42	1/1:18,0:14:0.34:21,0,0	1/1:17,0:15:5.45:70,5,0	0/1:17,0:16:7.70:8,0,213	0/1:16,1:16:4.91:5,0,9	0/1:18,1:15:44:110,0,44	0/0:12,0:12:4.09:0,4,27	0/0:21,0:20:45.42:0,45,504	0/1:15,2:16:45.25:45,0,46	1/1:14,1:15:0.46:5,0,0	0/1:19,3:22:21.44:32,0,21	0/1:23,1:23:27.92:30,0,28	0/1:20,1:21:19.48:81,0,19	0/1:13,0:11:25.80:29,0,26	0/0:13,0:11:23.40:0,23,135	0/0:14,0:13:2.06:0,2,14	./.	0/0:12,0:12:24.02:0,24,279	0/0:10,0:8:4.55:0,5,17	./.	0/0:8,0:7:9.50:0,10,127	0/1:16,0:14:7.52:8,0,99	0/1:15,1:16:46.28:96,0,46	0/1:10,0:10:10.50:10,0,56
chr10	13745653	.	TTTTC	T	1942.59	PASS	AB=0.994;AC=24;AF=0.429;AN=56;BaseQRankSum=6.372;DP=563;FS=15.348;HRun=0;HaplotypeScore=119.2462;InbreedingCoeff=-0.4695;MQ=46.50;MQ0=24;MQRankSum=-3.444;QD=5.05;ReadPosRankSum=7.458;VQSLOD=0.6429;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:19:38.18:0,38,526	1/1:9,0:8:4.48:77,4,0	0/0:51,0:7:9.20:0,9,107	0/0:66,0:13:22.26:0,22,178	0/1:23,0:21:13.05:138,0,13	0/1:12,0:12:17.69:18,0,57	0/1:15,0:14:29.72:116,0,30	0/1:24,1:24:79.92:80,0,267	0/1:20,0:19:75.54:76,0,86	0/1:17,0:17:71.08:130,0,71	0/1:16,0:15:9.47:171,0,9	0/0:16,0:14:35.08:0,35,521	0/1:21,0:20:77.31:133,0,77	0/1:12,0:12:17.19:30,0,17	0/1:21,0:21:41.95:42,0,97	0/1:15,0:15:53.67:54,0,64	0/1:28,0:25:61.64:179,0,62	0/1:11,0:8:21.19:21,0,42	0/1:20,0:19:62.80:63,0,180	0/1:24,0:23:75.85:160,0,76	0/1:7,0:6:29.02:29,0,35	0/0:6,0:6:18.01:0,18,308	0/1:13,0:12:35.07:80,0,35	0/1:18,0:17:12.81:13,0,51	0/0:17,0:15:37.16:0,37,553	0/1:21,0:20:72.35:166,0,72	0/1:18,2:19:22.93:132,0,23	1/1:16,1:16:24.91:201,25,0
chr10	13745657	.	CTTTT	C	5264.35	PASS	AB=0.881;AC=28;AF=0.500;AN=56;BaseQRankSum=-4.531;DP=593;FS=31.420;HRun=14;HaplotypeScore=113.2251;InbreedingCoeff=-0.1707;MQ=44.54;MQ0=31;MQRankSum=3.044;QD=13.10;ReadPosRankSum=7.085;VQSLOD=0.6957;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:20:38.94:0,39,605	0/1:8,0:7:17.35:185,0,17	0/0:55,0:8:8.85:0,9,87	0/0:73,0:13:22.62:0,23,123	0/1:23,1:22:25.75:304,0,26	0/1:8,1:10:5.36:88,0,5	0/1:12,3:14:9.53:266,0,10	0/1:31,2:31:99:247,0,192	0/1:18,2:19:54.16:219,0,54	1/1:9,9:18:17.74:361,18,0	1/1:10,7:16:9.02:341,9,0	0/0:14,0:13:33.01:0,33,452	0/1:19,3:20:36.34:382,0,36	0/1:9,5:13:48.25:48,0,59	0/1:11,9:20:54.79:119,0,55	0/1:13,0:13:50.48:158,0,50	0/1:28,2:26:9.56:428,0,10	0/1:12,0:9:16.89:34,0,17	0/1:22,2:22:35.46:266,0,35	1/1:23,2:24:31.14:499,31,0	1/1:6,0:5:7.77:59,8,0	0/0:6,0:6:15.04:0,15,278	1/1:13,1:13:29.86:315,30,0	0/1:10,8:17:44.43:53,0,44	0/0:15,0:14:34.33:0,34,554	0/1:15,7:21:23.34:405,0,23	1/1:13,7:19:1.08:244,1,0	0/1:17,0:16:27.87:242,0,28
chr10	13745666	.	T	TTC	4047.66	PASS	AB=0.835;AC=24;AF=0.429;AN=56;BaseQRankSum=-1.598;DP=608;FS=51.067;HRun=0;HaplotypeScore=107.3815;InbreedingCoeff=-0.4305;MQ=37.02;MQ0=38;MQRankSum=2.625;QD=10.07;ReadPosRankSum=6.789;VQSLOD=1.2970;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:20:47.76:0,48,489	1/1:8,2:8:14.06:162,14,0	0/0:54,0:4:8.85:0,9,82	0/0:92,0:15:25.07:0,25,148	0/1:17,7:22:29.19:268,0,29	0/1:9,0:9:23.51:104,0,24	0/1:13,2:14:29.55:159,0,30	0/1:32,2:32:99:218,0,130	0/1:11,6:16:31.92:185,0,32	0/1:13,4:17:16.55:262,0,17	0/1:12,4:15:26.75:196,0,27	0/0:15,0:13:35.79:0,36,362	0/1:14,6:19:30.91:384,0,31	0/1:15,1:15:34.91:35,0,73	0/1:17,3:20:92.20:95,0,92	0/1:11,1:12:45.46:115,0,45	0/1:21,6:24:82.72:268,0,83	0/1:6,5:7:27.48:29,0,27	0/1:22,2:22:53.29:184,0,53	0/1:17,5:22:6.68:345,0,7	0/1:4,1:4:7.79:49,0,8	0/0:6,0:6:15.04:0,15,194	1/1:12,1:12:26.48:263,26,0	0/1:17,2:17:25.71:53,0,26	0/0:15,0:12:34.33:0,34,408	0/1:25,2:26:99:228,0,144	0/1:15,6:19:9.79:199,0,10	0/1:8,9:16:19.52:248,0,20
chr10	13745670	.	TTC	T	1979.04	PASS	AB=0.985;AC=39;AF=0.696;AN=56;BaseQRankSum=3.355;DP=607;FS=11.334;HRun=0;HaplotypeScore=111.5259;InbreedingCoeff=-0.2010;MQ=36.08;MQ0=44;MQRankSum=-5.429;QD=3.55;ReadPosRankSum=1.375;VQSLOD=1.9905;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:22:0.57:1,0,346	1/1:10,0:8:4.86:47,5,0	0/0:48,2:3:6.02:0,6,81	0/1:90,0:12:16.19:17,0,16	1/1:26,0:23:6.05:114,6,0	1/1:8,0:8:0.09:10,0,0	0/1:15,0:14:3.63:90,0,4	0/1:34,0:32:39.40:39,0,160	1/1:18,1:16:14.85:140,15,0	0/1:17,0:17:21.86:64,0,22	1/1:16,0:15:5.26:117,5,0	0/1:15,0:13:9.45:9,0,136	1/1:19,1:17:15.49:134,15,0	0/1:15,0:14:13.50:87,0,14	1/1:19,1:20:25.18:170,25,0	0/1:12,0:12:3.84:65,0,4	0/1:28,1:25:5.08:177,0,5	1/1:12,0:8:12.16:79,12,0	1/1:23,0:21:2.25:157,2,0	0/1:21,0:20:11.82:88,0,12	1/1:5,0:4:2.47:48,2,0	0/1:6,0:6:8.33:8,0,110	0/1:13,1:13:0.84:44,0,1	0/1:17,2:17:12.01:14,0,12	0/1:16,0:13:19.89:20,0,237	0/1:29,1:28:0.18:163,0,0	1/1:22,0:19:25.71:143,26,0	1/1:17,0:15:9.94:78,10,0
chr10	13745674	.	TTTTC	T	1486.37	PASS	AB=0.972;AC=27;AF=0.482;AN=56;BaseQRankSum=2.824;DP=588;FS=33.197;HRun=0;HaplotypeScore=124.5145;InbreedingCoeff=-0.1990;MQ=35.23;MQ0=46;MQRankSum=-3.662;QD=3.34;ReadPosRankSum=2.660;VQSLOD=0.5414;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:21:29.18:0,29,392	0/1:8,1:7:1.84:78,0,2	0/0:44,0:3:5.89:0,6,64	0/1:85,0:12:4:4,0,56	0/1:24,1:22:4.67:136,0,5	0/1:8,0:8:8.48:8,0,17	0/1:14,0:13:29.41:29,0,36	0/0:36,0:34:0.93:0,1,215	0/1:18,0:15:18.84:85,0,19	0/1:18,0:17:25.16:90,0,25	0/1:14,2:15:32.20:91,0,32	0/0:14,0:12:10.83:0,11,219	0/1:16,2:15:23.11:65,0,23	0/1:15,0:14:17.01:17,0,17	1/1:18,1:19:14.15:136,14,0	0/1:11,1:12:25.31:39,0,25	0/1:29,0:24:10.41:117,0,10	1/1:10,0:7:7.79:63,8,0	0/1:21,1:21:34.08:80,0,34	1/1:23,0:21:0.77:156,1,0	0/1:5,0:4:3.23:19,0,3	0/0:5,0:5:9.25:0,9,129	0/1:12,0:11:6.17:40,0,6	0/1:19,0:17:4.84:5,0,41	0/0:18,0:15:29.99:0,30,348	0/1:32,0:30:43.06:185,0,43	1/1:20,1:18:17.64:133,18,0	1/1:14,1:13:4:69,4,0
chr10	13745675	.	TTTC	T	3026.08	PASS	AB=0.954;AC=37;AF=0.661;AN=56;BaseQRankSum=1.708;DP=591;FS=1.945;HRun=0;HaplotypeScore=112.2429;InbreedingCoeff=-0.1555;MQ=34.85;MQ0=46;MQRankSum=-4.358;QD=5.82;ReadPosRankSum=3.963;VQSLOD=2.4014;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:22:26.31:0,26,270	1/1:8,1:7:9.47:77,9,0	0/0:44,0:3:5.89:0,6,68	0/1:83,0:11:8.57:9,0,25	1/1:23,3:23:38.70:355,39,0	0/1:8,0:8:7.57:61,0,8	0/1:13,1:13:12.52:101,0,13	0/1:35,1:34:99:104,0,154	1/1:16,2:15:6.70:179,7,0	0/1:15,3:17:12.64:190,0,13	0/1:15,1:15:29.77:101,0,30	0/1:13,0:11:8.36:8,0,140	1/1:17,0:14:6.04:147,6,0	1/1:15,0:14:1.81:79,2,0	1/1:19,1:19:26.23:231,26,0	1/1:12,0:12:3.82:75,4,0	0/1:24,5:24:24.34:236,0,24	1/1:10,0:7:15.99:110,16,0	0/1:23,0:22:7.37:159,0,7	0/1:22,2:22:0.75:223,0,1	1/1:4,1:4:4.22:37,4,0	0/1:5,0:5:3.22:3,0,92	0/1:10,2:11:0.95:92,0,1	0/1:19,0:17:11.15:11,0,26	0/1:18,0:15:23.30:23,0,198	0/1:32,1:32:20.07:257,0,20	1/1:17,2:16:24:181,24,0	1/1:15,1:14:17.27:135,17,0
chr10	13745676	.	TTC	T	3498.91	PASS	AB=0.974;AC=37;AF=0.661;AN=56;BaseQRankSum=1.500;DP=583;FS=0.886;HRun=0;HaplotypeScore=104.3932;InbreedingCoeff=-0.1589;MQ=34.97;MQ0=47;MQRankSum=-5.036;QD=6.77;ReadPosRankSum=4.434;VQSLOD=2.7157;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:22:1.19:0,1,136	1/1:8,1:7:11.73:101,12,0	0/0:39,0:3:5.89:0,6,56	0/1:78,0:11:13.43:13,0,16	1/1:25,1:23:36.12:291,36,0	0/1:9,0:9:5.69:87,0,6	0/1:13,1:13:10.47:102,0,10	0/1:35,1:34:99:124,0,139	1/1:18,0:15:19.79:188,20,0	0/1:18,0:17:16.42:157,0,16	0/1:15,1:15:18.63:176,0,19	0/1:12,1:11:1.67:2,0,55	1/1:14,1:12:12.96:162,13,0	0/1:15,0:14:1.78:122,0,2	1/1:20,1:20:27.91:205,28,0	1/1:14,0:14:12.46:127,12,0	0/1:26,3:24:11.76:194,0,12	1/1:8,2:7:17.79:154,18,0	0/1:23,0:22:1.20:220,0,1	1/1:21,3:22:17.88:259,18,0	1/1:5,0:4:4.63:44,5,0	0/1:5,0:5:26.71:27,0,44	0/1:13,0:11:3.80:88,0,4	0/1:18,1:17:8.62:43,0,9	0/1:18,0:15:47.66:48,0,114	0/1:33,1:32:20.28:231,0,20	1/1:19,0:16:26.93:206,27,0	1/1:16,0:14:19.69:128,20,0
chr10	13745677	.	TC	T	3864.11	PASS	AB=0.977;AC=40;AF=0.714;AN=56;BaseQRankSum=0.345;DP=573;FS=7.351;HRun=1;HaplotypeScore=95.2134;InbreedingCoeff=-0.1834;MQ=34.87;MQ0=45;MQRankSum=-1.671;QD=7.20;ReadPosRankSum=4.950;VQSLOD=0.8040;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:25,2:22:53.16:53,0,55	1/1:9,0:7:10.92:59,11,0	0/0:35,1:3:5.88:0,6,46	0/1:75,2:11:6.15:23,0,6	1/1:24,1:22:38.30:303,38,0	0/1:9,0:9:4.11:104,0,4	0/1:13,1:13:1.96:98,0,2	0/1:34,1:33:99:133,0,106	1/1:16,2:15:25.97:236,26,0	0/1:19,0:18:2.50:170,0,3	0/1:16,0:15:10.19:114,0,10	1/1:13,0:11:3.27:55,3,0	1/1:15,0:12:20.49:186,20,0	0/1:15,0:14:13.09:103,0,13	1/1:20,0:19:28.16:221,28,0	1/1:14,0:14:13.19:169,13,0	0/1:27,0:23:7.50:214,0,8	1/1:10,0:7:17.80:140,18,0	1/1:21,1:21:16.99:258,17,0	1/1:24,0:22:21.43:255,21,0	1/1:5,0:4:4.82:47,5,0	0/1:6,0:6:9.53:40,0,10	0/1:11,1:10:0.58:123,0,1	0/1:19,0:17:4.13:35,0,4	0/1:17,1:15:46.92:61,0,47	0/1:34,0:32:7.84:250,0,8	1/1:18,2:17:29.39:245,29,0	1/1:13,1:12:20.77:170,21,0
chr10	13745678	.	CT	C	462.08	PASS	AB=0.993;AC=25;AF=0.446;AN=56;BaseQRankSum=1.456;DP=580;FS=0.583;HRun=15;HaplotypeScore=110.6697;InbreedingCoeff=-0.0270;MQ=34.61;MQ0=49;MQRankSum=0.527;QD=1.13;ReadPosRankSum=5.047;VQSLOD=-0.4109;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:22,7:24:15.77:157,16,0	0/0:8,0:7:10.47:0,10,57	0/0:33,0:2:3:0,3,26	0/1:76,0:10:0.64:1,0,10	0/1:24,0:22:9.53:10,0,32	1/1:10,0:10:1.11:5,1,0	0/1:15,0:13:2.15:2,0,26	0/0:31,0:34:35.31:0,35,199	0/1:18,0:15:7.28:43,0,7	0/1:18,0:18:14.26:14,0,41	0/0:17,0:16:19.07:0,19,105	1/1:10,2:11:9.41:59,9,0	0/1:14,0:12:14.15:14,0,25	0/1:15,0:14:0.10:0,0,14	0/1:19,0:18:16.16:16,0,21	0/0:15,0:14:2.46:0,2,37	0/1:25,0:23:33.35:35,0,33	0/1:10,0:7:0.77:9,0,1	0/1:22,0:21:0.13:0,0,64	0/1:23,0:22:11.91:12,0,21	0/0:5,0:4:0.47:0,0,1	1/1:2,4:6:10.94:67,11,0	1/1:11,0:11:4.89:31,5,0	0/0:20,0:17:8.49:0,8,36	0/1:16,2:15:22.39:78,0,22	0/0:31,0:33:12.91:0,13,93	0/1:20,0:17:8.89:37,0,9	0/1:13,0:12:14.07:24,0,14
chr10	13746318	.	C	CGTGTGTGTGTGTGTGT	11835.42	PASS	AB=1.000;AC=45;AF=0.865;AN=52;BaseQRankSum=2.982;DP=749;FS=6.636;HRun=0;HaplotypeScore=346.0785;InbreedingCoeff=0.4328;MQ=51.36;MQ0=7;MQRankSum=-6.665;QD=19.73;ReadPosRankSum=-4.606;VQSLOD=1.8624;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:34:1.96:0,2,834	1/1:13,0:12:5.99:131,6,0	./.	./.	1/1:24,0:24:2.65:213,3,0	1/1:27,0:26:6.35:265,6,0	1/1:40,0:38:23.67:547,24,0	1/1:30,0:30:37.43:869,37,0	1/1:19,0:19:11.79:481,12,0	1/1:39,0:39:40.01:1648,40,0	1/1:11,1:13:2.93:226,3,0	0/0:27,0:26:6.78:0,7,1295	1/1:30,3:31:21.54:1199,22,0	1/1:30,0:29:9.01:162,9,0	1/1:33,0:32:9.71:330,10,0	1/1:36,0:36:14.67:791,15,0	1/1:24,4:27:15.05:991,15,0	1/1:18,0:17:10.19:219,10,0	1/1:18,0:16:19.59:858,20,0	1/1:18,0:17:2.82:21,3,0	1/1:40,0:38:10.82:388,11,0	0/1:28,0:30:45.61:46,0,1175	1/1:16,0:15:2.88:96,3,0	1/1:31,0:30:9.95:288,10,0	0/0:22,0:23:36.12:0,36,1230	1/1:31,0:29:27.55:1290,28,0	1/1:27,0:26:18.38:692,18,0	1/1:4,0:4:3.01:83,3,0
chr10	13746988	.	GC	G	5541.51	PASS	AB=0.867;AC=45;AF=0.804;AN=56;BaseQRankSum=0.241;DP=336;FS=22.280;HRun=10;HaplotypeScore=40.6348;InbreedingCoeff=0.8301;MQ=75.79;MQ0=0;MQRankSum=-2.365;QD=19.44;ReadPosRankSum=2.378;VQSLOD=3.5897;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:16.03:0,16,379	1/1:0,3:3:6.47:53,6,0	0/1:11,2:13:27.09:27,0,169	0/0:9,0:9:14.66:0,15,117	1/1:0,11:11:26.98:234,27,0	1/1:1,7:8:17.99:156,18,0	1/1:4,14:18:38.94:339,39,0	1/1:7,11:18:35.98:312,36,0	1/1:0,9:9:18:156,18,0	1/1:1,11:12:32.99:285,33,0	1/1:2,7:9:20.98:182,21,0	0/0:9,0:9:18.05:0,18,199	1/1:2,12:15:28.90:240,29,0	1/1:0,12:12:32.99:286,33,0	1/1:3,12:15:32.99:287,33,0	1/1:1,10:11:29.99:260,30,0	1/1:2,21:23:23.81:436,24,0	1/1:1,11:12:32.99:286,33,0	1/1:0,6:6:18:156,18,0	1/1:0,7:7:14.69:130,15,0	1/1:6,29:35:78.87:700,79,0	0/0:8,0:8:18.04:0,18,191	1/1:1,7:8:17.99:157,18,0	1/1:0,14:14:38.99:339,39,0	0/0:9,0:9:15.03:0,15,155	1/1:3,9:12:23.98:208,24,0	1/1:2,9:11:26.99:234,27,0	1/1:0,3:3:9:78,9,0
chr10	13748040	.	C	CG	2019.08	PASS	AB=0.837;AC=36;AF=0.667;AN=54;BaseQRankSum=-1.645;DP=351;FS=4.743;HRun=10;HaplotypeScore=55.5318;InbreedingCoeff=-0.0175;MQ=74.22;MQ0=0;MQRankSum=1.680;QD=6.51;ReadPosRankSum=-1.623;VQSLOD=0.9949;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:19:15.58:0,16,149	0/1:2,1:3:17.37:28,0,17	0/1:9,0:10:4.80:5,0,37	0/1:12,0:12:28.89:37,0,29	0/1:5,0:5:0.01:0,0,0	1/1:6,0:6:6.31:40,6,0	0/1:14,15:30:81.56:82,0,116	0/1:8,5:13:9.61:112,0,10	1/1:8,4:12:23.49:201,23,0	0/0:7,0:7:1.41:0,1,22	./.	0/1:24,1:25:12.39:12,0,198	1/1:7,6:14:5.14:80,5,0	1/1:14,5:19:25.43:222,25,0	1/1:4,12:16:15.51:161,16,0	1/1:3,1:7:5.68:28,6,0	0/1:6,12:19:8.06:97,0,8	1/1:10,2:12:17.60:188,18,0	1/1:5,4:10:8.89:79,9,0	1/1:2,3:5:5.91:48,6,0	0/1:32,8:41:21.57:297,0,22	0/0:12,0:12:17.70:0,18,137	1/1:1,1:2:3.01:32,3,0	0/1:12,2:14:72.18:129,0,72	0/1:10,1:11:11.13:11,0,114	1/1:4,5:9:13.30:93,13,0	1/1:7,3:10:18.01:171,18,0	0/1:2,1:3:18.63:26,0,19
chr10	13749724	.	G	GCA	34034.99	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-16.615;DP=1209;FS=10.888;HRun=0;HaplotypeScore=156.6236;InbreedingCoeff=0.9839;MQ=58.44;MQ0=13;MQRankSum=2.437;QD=36.52;ReadPosRankSum=0.861;VQSLOD=6.1835;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:58:99:0,144,1853	1/1:0,18:18:45.15:759,45,0	0/0:49,0:25:27.65:0,28,463	0/0:51,0:22:56.94:0,57,687	1/1:2,22:24:51.17:860,51,0	1/1:3,26:30:57.19:938,57,0	1/1:6,31:39:75.23:1266,75,0	1/1:12,34:47:96.31:1589,96,0	1/1:7,41:48:77.45:1882,77,0	1/1:6,50:58:99:2503,153,0	1/1:3,20:23:41.67:708,42,0	0/0:61,0:61:99:0,163,2070	1/1:10,42:53:99:1818,108,0	1/1:7,47:56:93.75:2133,94,0	1/1:8,60:67:99:2682,160,0	1/1:10,45:56:78.17:1884,78,0	1/1:5,32:39:81.28:1366,81,0	1/1:12,15:25:53.97:836,54,0	1/1:3,18:21:57.16:920,57,0	1/1:2,23:25:54.18:911,54,0	1/1:19,129:149:99:5613,336,0	0/0:31,0:31:66.21:0,66,849	1/1:3,17:20:30.10:506,30,0	1/1:2,47:50:69.62:1733,70,0	0/0:26,0:26:57.58:0,58,838	1/1:5,25:30:7.51:1216,8,0	1/1:3,26:29:69.71:1164,70,0	1/1:2,15:17:45.15:750,45,0
chr10	13749905	.	CAA	C	12267.82	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=1.301;DP=781;FS=9.364;HRun=13;HaplotypeScore=119.8077;InbreedingCoeff=0.9830;MQ=67.60;MQ0=3;MQRankSum=-0.993;QD=20.58;ReadPosRankSum=5.774;VQSLOD=3.1789;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,1:43:74.70:0,75,1326	1/1:3,10:14:28.02:261,28,0	0/0:32,0:24:27.13:0,27,306	0/0:22,0:20:7.78:0,8,245	1/1:11,18:30:56.27:568,56,0	1/1:3,20:26:59.29:530,59,0	1/1:5,12:17:42.06:407,42,0	1/1:4,22:31:39.14:564,39,0	1/1:6,18:24:60.05:573,60,0	1/1:7,28:37:80.67:811,81,0	1/1:4,15:19:38.97:378,39,0	0/0:28,0:33:75.14:0,75,949	1/1:5,19:24:54.07:524,54,0	1/1:6,32:40:74.97:827,75,0	1/1:5,27:34:59.69:664,60,0	1/1:6,31:37:75.09:728,75,0	1/1:4,19:25:66.42:631,66,0	1/1:2,25:29:50.98:594,51,0	1/1:2,15:20:35.54:422,36,0	1/1:2,22:25:68.72:642,69,0	1/1:14,19:34:47.80:565,48,0	0/0:22,2:25:29.36:0,29,719	1/1:3,16:19:31.60:368,32,0	1/1:8,33:41:98.85:943,99,0	0/0:20,1:26:41.59:0,42,845	1/1:1,16:19:29.91:391,30,0	1/1:2,25:28:62.76:643,63,0	1/1:8,8:18:20.62:236,21,0
chr10	13750131	.	A	ACAAAAAAC	12956.17	PASS	AB=0.656;AC=41;AF=0.732;AN=56;BaseQRankSum=6.746;DP=584;FS=5.072;HRun=0;HaplotypeScore=122.8202;InbreedingCoeff=0.5086;MQ=44.24;MQ0=18;MQRankSum=-6.334;QD=26.50;ReadPosRankSum=2.887;VQSLOD=3.8351;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:24:70.39:0,70,1643	1/1:4,0:6:14.98:173,15,0	0/0:12,0:4:11.90:0,12,155	0/1:11,0:3:3.04:3,0,60	1/1:3,1:24:44.98:1025,45,0	1/1:1,0:16:15.05:548,15,0	1/1:8,0:23:2.94:110,3,0	1/1:21,0:41:9.01:820,9,0	1/1:1,0:14:15.05:550,15,0	1/1:1,0:26:17.91:1058,18,0	1/1:3,0:17:17.99:587,18,0	0/0:22,0:22:54.14:0,54,1288	1/1:1,0:11:10.81:437,11,0	0/1:3,0:19:2.15:438,0,2	1/1:1,0:25:33.11:1140,33,0	1/1:0,0:19:20.10:663,20,0	0/1:8,0:24:64.40:201,0,64	1/1:1,0:24:6.02:218,6,0	1/1:1,0:18:33.20:667,33,0	0/1:3,0:24:16.15:415,0,16	1/1:0,0:12:3.01:110,3,0	0/0:10,0:10:21.07:0,21,567	1/1:2,0:16:9:330,9,0	1/1:3,0:26:18.06:664,18,0	0/0:26,0:26:72.15:0,72,1619	1/1:3,0:35:66.23:1410,66,0	1/1:1,0:31:30.51:1001,31,0	0/1:5,0:14:73.20:390,0,73
chr10	13760494	.	G	GCT	23508.77	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-3.595;DP=641;FS=4.276;HRun=0;HaplotypeScore=86.1407;InbreedingCoeff=0.9714;MQ=80.81;MQ0=3;MQRankSum=-2.678;QD=47.30;ReadPosRankSum=2.155;VQSLOD=6.2095;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,120,1677	1/1:2,2:4:6.02:110,6,0	0/0:13,0:13:14.09:0,14,409	0/0:21,0:21:53.56:0,54,657	1/1:2,14:16:45.15:823,45,0	1/1:2,12:14:33.11:605,33,0	1/1:1,30:32:84.29:1540,84,0	1/1:3,18:21:54.17:954,54,0	1/1:1,20:21:57.20:1040,57,0	1/1:3,21:24:63.21:1126,63,0	1/1:3,6:9:24.08:427,24,0	0/0:40,0:40:99:0,111,1589	1/1:1,20:22:60.21:1098,60,0	1/1:0,24:24:72.25:1319,72,0	1/1:0,22:22:63.22:1155,63,0	1/1:1,22:23:54.18:990,54,0	1/1:0,45:45:99:2200,120,0	1/1:1,26:27:72.25:1319,72,0	1/1:1,15:16:45.15:818,45,0	1/1:0,8:9:15.05:275,15,0	1/1:1,52:53:99:2584,141,0	0/0:16,0:16:45.13:0,45,623	1/1:0,14:15:39.13:713,39,0	1/1:1,36:36:93.32:1704,93,0	0/0:13,0:13:39.13:0,39,556	1/1:3,21:24:60.18:1062,60,0	1/1:0,22:22:57.20:1044,57,0	1/1:1,12:13:33.11:605,33,0
chr10	13773579	.	T	TA	1089.09	PASS	AB=0.933;AC=23;AF=0.411;AN=56;BaseQRankSum=-0.886;DP=600;FS=3.306;HRun=15;HaplotypeScore=86.7181;InbreedingCoeff=-0.1456;MQ=64.48;MQ0=3;MQRankSum=0.318;QD=2.64;ReadPosRankSum=0.139;VQSLOD=0.1659;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:12,16:32:17.17:204,17,0	0/0:8,0:8:11.66:0,12,72	0/1:21,0:10:1.72:17,0,2	0/1:15,0:8:3.38:3,0,21	0/1:27,1:28:14.08:14,0,201	0/0:15,0:15:14.26:0,14,163	0/0:14,0:14:7.03:0,7,109	0/1:26,1:28:48.05:48,0,127	0/1:17,0:17:20.55:21,0,84	0/0:30,1:32:13.64:0,14,246	0/0:17,1:20:2.95:0,3,170	1/1:13,3:17:8.83:145,9,0	0/1:17,1:18:15.34:15,0,139	0/1:19,0:19:58.16:58,0,108	0/0:28,0:28:15.68:0,16,206	0/1:23,4:27:28.57:29,0,185	0/1:16,5:23:89.68:90,0,104	0/0:20,0:21:15.38:0,15,206	0/1:16,1:18:38.83:39,0,96	0/0:26,5:32:0.26:0,0,187	0/1:10,4:14:20.87:21,0,113	1/1:9,11:20:8.75:166,9,0	0/1:26,3:30:84.76:85,0,110	0/0:13,2:17:5.08:0,5,129	1/1:7,19:27:32.49:244,32,0	0/1:25,1:26:7.88:8,0,159	0/1:20,0:21:23.38:23,0,142	0/1:9,1:10:27.80:28,0,39
chr10	13773743	.	GAA	G	4153.01	PASS	AB=0.742;AC=39;AF=0.696;AN=56;BaseQRankSum=3.467;DP=504;FS=2.914;HRun=16;HaplotypeScore=63.6399;InbreedingCoeff=0.2638;MQ=59.51;MQ0=4;MQRankSum=-0.825;QD=9.96;ReadPosRankSum=4.332;VQSLOD=1.9845;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,1:37:57.05:0,57,785	1/1:0,4:4:8.91:75,9,0	0/1:24,0:9:20.01:20,0,22	0/1:16,0:8:23.72:25,0,24	0/1:6,5:14:0.67:29,0,1	0/1:10,6:21:0.86:99,0,1	1/1:3,12:16:38.61:313,39,0	1/1:11,9:21:17.65:192,18,0	1/1:3,10:14:26.57:212,27,0	1/1:9,11:22:19.68:183,20,0	0/1:6,3:11:13.51:51,0,14	0/0:17,0:20:44.40:0,44,443	1/1:4,9:15:29.34:217,29,0	1/1:10,9:22:1.77:230,2,0	1/1:6,16:24:35.36:274,35,0	1/1:6,17:24:41.64:358,42,0	1/1:7,17:26:21.61:344,22,0	1/1:7,17:24:35.73:301,36,0	0/1:13,2:17:10.14:54,0,10	0/1:6,4:9:19.30:63,0,19	0/1:8,11:20:5.21:149,0,5	0/0:12,0:12:21.05:0,21,259	1/1:0,5:5:2.64:25,3,0	1/1:7,16:24:25.96:376,26,0	0/0:14,0:18:34.74:0,35,391	1/1:5,13:18:28.49:230,28,0	1/1:3,13:16:29.88:251,30,0	0/1:2,4:7:30.34:83,0,30
chr10	13773956	.	C	CA	18520.27	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-12.476;DP=661;FS=5.483;HRun=5;HaplotypeScore=55.1632;InbreedingCoeff=0.9970;MQ=64.90;MQ0=0;MQRankSum=-4.566;QD=34.17;ReadPosRankSum=0.635;VQSLOD=5.1070;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:75.15:0,75,793	1/1:1,11:12:33.11:434,33,0	0/0:10,0:10:16.03:0,16,217	0/0:11,0:11:26.07:0,26,242	1/1:1,32:33:90.29:1184,90,0	1/1:0,30:30:78.25:1026,78,0	1/1:0,21:21:54.18:710,54,0	1/1:6,20:26:57.17:736,57,0	1/1:1,23:24:60.20:789,60,0	1/1:0,22:22:66.21:867,66,0	1/1:4,24:28:66.21:856,66,0	0/0:28,0:28:75.19:0,75,805	1/1:4,14:18:42.14:553,42,0	1/1:0,19:19:54.18:711,54,0	1/1:3,23:26:66.21:868,66,0	1/1:2,30:32:87.28:1145,87,0	1/1:1,38:39:99:1461,111,0	1/1:1,31:32:87.21:1107,87,0	1/1:9,18:27:66.20:837,66,0	1/1:2,23:25:66.17:849,66,0	1/1:7,11:18:39.12:500,39,0	0/0:19,0:19:45.11:0,45,484	1/1:3,20:23:57.19:750,57,0	1/1:5,9:14:33.09:407,33,0	0/0:25,0:25:69.16:0,69,734	1/1:0,26:26:78.24:1010,78,0	1/1:2,34:36:99:1303,99,0	1/1:1,10:11:33.09:419,33,0
chr10	13774042	.	AT	A	7984.83	PASS	AB=0.785;AC=44;AF=0.786;AN=56;BaseQRankSum=5.938;DP=582;FS=26.827;HRun=12;HaplotypeScore=67.4027;InbreedingCoeff=0.7618;MQ=69.10;MQ0=2;MQRankSum=-2.113;QD=16.70;ReadPosRankSum=2.463;VQSLOD=4.0658;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:81.11:0,81,801	1/1:1,2:4:8.01:52,8,0	0/0:18,1:15:28.78:0,29,245	0/1:11,1:9:25.69:26,0,39	1/1:4,17:22:55.83:424,56,0	1/1:4,18:22:53.79:418,54,0	1/1:2,17:20:52.82:401,53,0	1/1:6,19:26:52.76:395,53,0	1/1:6,11:17:32.85:255,33,0	1/1:13,17:32:75.75:566,76,0	0/1:5,6:11:6.53:138,0,7	0/0:22,0:22:48.10:0,48,487	1/1:3,14:17:44.82:348,45,0	1/1:4,16:21:58.81:447,59,0	1/1:5,16:21:59.75:462,60,0	1/1:7,12:19:38.83:300,39,0	1/1:9,13:23:46.21:349,46,0	1/1:10,18:29:29.27:406,29,0	1/1:5,20:27:63.82:474,64,0	1/1:2,10:12:3.45:203,3,0	1/1:4,21:26:52.79:401,53,0	0/0:15,0:15:42:0,42,403	1/1:3,11:14:29.87:232,30,0	1/1:5,29:34:83.62:650,84,0	0/0:17,1:18:21.86:0,22,403	1/1:8,12:20:21.53:318,22,0	1/1:14,22:36:65.70:511,66,0	1/1:4,9:13:26.86:209,27,0
chr10	13775240	.	GA	G	1914.74	PASS	AB=0.807;AC=34;AF=0.630;AN=54;BaseQRankSum=0.590;DP=508;FS=0.502;HRun=16;HaplotypeScore=57.8567;InbreedingCoeff=0.0293;MQ=59.93;MQ0=20;MQRankSum=0.339;QD=4.48;ReadPosRankSum=1.892;VQSLOD=0.9519;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:64.78:0,65,511	./.	0/1:24,0:5:3.97:4,0,37	0/1:24,0:9:8.74:9,0,23	0/1:6,9:15:24.98:84,0,25	1/1:9,3:14:11.93:64,12,0	1/1:9,2:10:12.87:64,13,0	0/1:27,3:31:22.94:93,0,23	0/1:9,5:14:0.52:134,0,1	1/1:8,3:11:18:98,18,0	0/1:14,1:13:10.26:70,0,10	0/0:17,1:18:8.20:0,8,219	0/1:14,3:17:22.94:87,0,23	1/1:5,4:9:11.14:71,11,0	1/1:13,10:23:14.77:81,15,0	0/1:18,4:21:54.91:116,0,55	1/1:19,18:35:4.32:201,4,0	0/1:19,15:33:11.85:129,0,12	0/1:17,6:22:30.98:158,0,31	0/1:6,5:10:32.86:53,0,33	0/1:8,8:14:5.72:84,0,6	0/0:1,0:1:3:0,3,25	1/1:5,4:13:25.78:131,26,0	1/1:11,9:19:16.25:94,16,0	0/0:15,0:16:29.63:0,30,224	1/1:14,4:17:2.36:117,2,0	1/1:11,3:13:19.72:99,20,0	1/1:3,3:5:7.89:42,8,0
chr10	13775402	.	T	TA	420.52	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-1.172;DP=520;FS=4.324;HRun=8;HaplotypeScore=53.5221;InbreedingCoeff=0.8580;MQ=71.78;MQ0=1;MQRankSum=-0.456;QD=20.02;ReadPosRankSum=0.248;VQSLOD=3.4870;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:95.91:0,96,842	0/0:10,0:10:29.99:0,30,266	0/0:17,0:11:6.12:0,6,87	0/0:15,0:13:10:0,10,124	0/0:21,0:21:63.03:0,63,576	0/0:25,0:25:60:0,60,540	0/0:8,0:8:23.99:0,24,214	0/0:49,0:49:99:0,123,1088	0/0:14,0:14:39.01:0,39,353	0/0:22,0:22:56.98:0,57,510	0/0:14,0:14:36.02:0,36,329	1/1:0,15:15:36.11:416,36,0	0/0:15,0:15:27.48:0,27,322	0/0:10,0:10:26.84:0,27,224	0/0:22,0:21:62.96:0,63,551	0/0:29,0:29:83.99:0,84,747	0/0:33,0:33:95.99:0,96,863	0/0:18,0:18:40.38:0,40,374	0/0:23,0:23:59.93:0,60,531	0/0:12,0:11:26.97:0,27,239	0/0:9,0:9:12:0,12,110	1/1:1,5:6:11.95:121,12,0	0/0:10,0:10:24.01:0,24,220	0/0:8,0:8:23.98:0,24,210	0/0:19,0:19:53.55:0,54,455	0/0:27,0:27:78.02:0,78,702	0/0:18,0:18:35.99:0,36,324	0/0:13,1:14:7.31:0,7,322
chr10	13775800	.	GACACAGACACAGACACAGGC	G	8232.88	PASS	AB=1.000;AC=43;AF=0.768;AN=56;BaseQRankSum=1.498;DP=567;FS=12.402;HRun=0;HaplotypeScore=237.8657;InbreedingCoeff=0.7665;MQ=42.26;MQ0=31;MQRankSum=-2.010;QD=21.16;ReadPosRankSum=-2.762;VQSLOD=2.1614;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:16:15.59:0,16,393	1/1:10,0:10:9.10:117,9,0	0/0:29,0:6:4.72:0,5,47	0/0:32,0:3:7.36:0,7,52	1/1:14,0:14:15.04:293,15,0	1/1:9,0:9:11.17:124,11,0	1/1:15,0:15:12.30:143,12,0	1/1:16,0:16:44.73:383,45,0	1/1:17,0:17:13.39:319,13,0	1/1:28,0:28:34.57:1108,35,0	1/1:11,0:11:6.02:109,6,0	0/0:43,0:43:99:0,108,3867	0/1:15,0:14:6.59:234,0,7	1/1:23,0:24:38.61:601,39,0	1/1:23,0:23:34.27:441,34,0	1/1:30,0:30:37.07:456,37,0	1/1:21,0:21:43.52:960,44,0	1/1:10,0:10:26.45:616,26,0	1/1:19,0:15:26.73:313,27,0	1/1:16,0:16:8.92:211,9,0	1/1:35,0:34:8.70:261,9,0	0/0:22,0:22:38.91:0,39,702	1/1:11,0:11:3.01:48,3,0	1/1:30,0:28:22.25:338,22,0	0/0:25,0:24:56.20:0,56,1750	1/1:3,12:13:23.33:372,23,0	1/1:15,0:15:23.63:457,24,0	1/1:5,0:5:13.29:330,13,0
chr10	13775802	.	CACAG	C	590.39	PASS	AB=0.982;AC=20;AF=0.357;AN=56;BaseQRankSum=4.664;DP=572;FS=0.619;HRun=0;HaplotypeScore=165.4836;InbreedingCoeff=-0.1613;MQ=41.72;MQ0=29;MQRankSum=-1.279;QD=1.91;ReadPosRankSum=-2.243;VQSLOD=2.4667;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:16:8.98:0,9,242	1/1:8,1:9:3.94:26,4,0	0/0:32,0:6:17.01:0,17,157	0/0:32,0:3:9.03:0,9,112	0/1:14,0:14:15.82:16,0,20	0/1:8,0:8:9:9,0,45	0/1:14,0:14:15.15:15,0,64	0/0:18,0:18:13.05:0,13,387	0/1:17,0:17:12.54:43,0,13	0/1:26,1:27:92.31:92,0,164	0/0:12,0:12:2.55:0,3,38	0/0:44,0:44:99:0,106,2397	0/1:13,1:13:25.19:25,0,48	0/1:23,0:23:9.07:9,0,50	0/1:21,2:23:14.85:56,0,15	0/1:26,2:28:31.06:31,0,75	0/1:22,0:22:97.44:114,0,97	0/1:11,0:11:83.31:83,0,91	0/0:20,0:16:16.49:0,16,428	0/0:18,0:18:1.94:0,2,14	1/1:36,0:35:10.87:81,11,0	0/0:24,0:24:36.11:0,36,594	0/0:11,0:11:0.47:0,0,1	0/1:28,0:27:14.63:15,0,19	0/0:25,0:24:54.17:0,54,1197	0/1:15,0:13:36.26:36,0,72	0/1:14,0:14:15.52:16,0,101	1/1:4,1:5:12.76:85,13,0
chr10	13775817	.	AGGCG	A	1363.01	PASS	AB=0.763;AC=26;AF=0.500;AN=52;BaseQRankSum=6.305;DP=525;FS=7.067;HRun=0;HaplotypeScore=153.1321;InbreedingCoeff=0.3436;MQ=37.52;MQ0=34;MQRankSum=-5.402;QD=5.56;ReadPosRankSum=0.173;VQSLOD=2.0218;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,1:15:11.19:0,11,160	1/1:3,5:8:2.57:16,3,0	0/0:38,0:6:10.90:0,11,122	0/0:34,0:3:7.26:0,7,69	1/1:12,2:12:2.99:23,3,0	0/1:4,2:6:11.07:28,0,11	0/0:8,0:7:7.36:0,7,43	1/1:20,0:20:4.26:16,4,0	1/1:6,6:11:5.91:70,6,0	1/1:16,6:21:14.34:313,14,0	./.	0/0:37,1:38:60.78:0,61,1577	0/1:6,6:10:9.86:30,0,10	0/1:8,6:14:14.97:16,0,15	0/0:13,6:20:0.96:0,1,3	0/1:14,10:23:7.92:8,0,32	1/1:11,9:22:30.62:383,31,0	0/1:11,3:13:4.09:166,0,4	0/1:26,2:24:28.96:69,0,29	1/1:13,3:15:2.97:20,3,0	0/0:25,7:33:3.90:0,4,8	0/0:19,0:20:16.30:0,16,226	./.	0/0:18,6:21:4.92:0,5,31	0/0:21,0:21:39.11:0,39,694	1/1:15,0:14:6.99:99,7,0	1/1:8,5:14:9.79:107,10,0	1/1:2,2:4:11.93:168,12,0
chr10	13775818	.	GGCGCAC	G	1581.03	PASS	AB=0.864;AC=24;AF=0.480;AN=50;BaseQRankSum=7.249;DP=517;FS=19.787;HRun=0;HaplotypeScore=157.7007;InbreedingCoeff=0.4815;MQ=37.52;MQ0=31;MQRankSum=-4.544;QD=7.42;ReadPosRankSum=0.417;VQSLOD=1.1063;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:15:10.62:0,11,109	1/1:5,2:8:3.47:28,3,0	0/0:38,0:6:8.20:0,8,109	0/0:34,0:3:6.49:0,6,67	./.	0/1:4,2:6:7.92:81,0,8	0/0:8,0:7:6.63:0,7,32	1/1:21,0:21:4.33:17,4,0	1/1:8,4:11:5.05:60,5,0	1/1:22,0:21:20.76:228,21,0	./.	0/0:38,0:38:19.22:0,19,922	1/1:9,3:10:2.94:18,3,0	0/0:10,4:14:4.02:0,4,17	0/0:12,9:20:0.60:0,1,2	0/1:14,10:23:26.06:44,0,26	1/1:15,6:21:29.10:459,29,0	1/1:6,7:12:14.48:235,14,0	0/1:27,0:24:21.85:147,0,22	0/1:15,0:14:0:0,0,0	0/0:19,14:33:2.43:0,2,6	0/0:20,0:20:16.29:0,16,200	./.	0/0:16,8:21:3.94:0,4,21	0/0:20,0:20:34.89:0,35,446	1/1:14,1:14:7.84:103,8,0	1/1:9,4:13:11.56:167,12,0	1/1:3,1:4:12.03:162,12,0
chr10	13775819	.	GCGCACACACACACACACACACACACACACA	G	4964.19	PASS	AB=1.000;AC=34;AF=0.680;AN=50;BaseQRankSum=7.349;DP=511;FS=8.996;HRun=0;HaplotypeScore=254.1218;InbreedingCoeff=0.4898;MQ=37.25;MQ0=31;MQRankSum=-6.528;QD=16.07;ReadPosRankSum=-2.750;VQSLOD=2.1128;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:14:8.35:0,8,51	0/1:8,0:8:14.46:131,0,14	0/0:38,0:6:2.95:0,3,42	0/0:34,0:3:4.79:0,5,29	1/1:3,10:12:2.97:20,3,0	1/1:6,0:6:6.02:183,6,0	0/1:9,0:7:0:0,0,0	1/1:12,9:21:56.71:644,57,0	1/1:12,0:11:6.86:162,7,0	1/1:7,15:21:26.89:259,27,0	./.	0/0:36,0:36:76.07:0,76,2050	1/1:12,0:10:5.91:38,6,0	1/1:13,0:13:3.01:20,3,0	1/1:21,0:20:15.02:105,15,0	1/1:24,0:23:12.90:227,13,0	1/1:21,0:21:38.65:1008,39,0	1/1:13,0:12:26.74:512,27,0	1/1:6,20:24:61.14:809,61,0	./.	1/1:33,0:33:0.19:1,0,0	0/0:20,0:20:11.77:0,12,120	./.	0/1:24,0:21:35.96:36,0,48	0/0:19,0:19:35.29:0,35,1308	1/1:15,0:14:13.88:217,14,0	1/1:12,0:12:18.78:411,19,0	0/1:4,0:4:24.45:181,0,24
chr10	13775821	.	GCACACA	G	493.29	PASS	AB=0.995;AC=26;AF=0.650;AN=40;BaseQRankSum=1.592;DP=533;FS=8.522;HRun=0;HaplotypeScore=168.9582;InbreedingCoeff=0.1460;MQ=36.69;MQ0=36;MQRankSum=-1.496;QD=1.46;ReadPosRankSum=1.656;VQSLOD=2.3829;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:19,1:16:0.05:0,0,0	0/0:10,0:10:1.64:0,2,11	./.	./.	./.	1/1:8,0:8:3.41:19,3,0	0/1:11,0:8:0:0,0,0	./.	1/1:13,0:12:2.54:17,3,0	0/0:23,0:21:2.95:0,3,23	./.	1/1:31,2:35:15.48:244,15,0	0/1:14,0:11:0:0,0,0	0/1:14,0:14:0.23:0,0,0	0/1:23,0:22:0.26:1,0,0	1/1:26,0:25:2.62:18,3,0	0/1:23,0:22:0.78:79,0,1	1/1:13,0:12:5.95:43,6,0	0/1:24,0:22:28.29:30,0,28	./.	1/1:36,0:35:0.47:1,0,0	./.	./.	0/1:26,0:23:0.21:1,0,0	1/1:18,1:20:8.95:76,9,0	0/1:16,0:15:13.96:14,0,14	1/1:13,0:13:4.38:38,4,0	0/1:4,0:4:5.97:12,0,6
chr10	13775849	.	A	AGG	4356.82	PASS	AB=0.858;AC=36;AF=0.667;AN=54;BaseQRankSum=6.209;DP=453;FS=1.284;HRun=0;HaplotypeScore=127.6570;InbreedingCoeff=0.3407;MQ=41.03;MQ0=36;MQRankSum=-3.384;QD=13.12;ReadPosRankSum=-0.750;VQSLOD=4.7583;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:15:14.22:0,14,227	0/1:3,4:7:7.29:188,0,7	0/0:12,0:3:2.93:0,3,48	0/0:21,0:5:13.26:0,13,157	1/1:13,0:10:2.97:20,3,0	0/1:6,6:13:32.06:49,0,32	1/1:6,17:21:6.75:46,7,0	0/1:11,0:11:5.70:307,0,6	1/1:11,1:11:0.60:245,1,0	1/1:17,0:15:5.75:56,6,0	./.	0/0:32,0:32:58.08:0,58,788	1/1:13,1:12:20.97:266,21,0	1/1:11,1:12:17.69:222,18,0	1/1:17,4:20:31.33:370,31,0	1/1:22,2:23:3.44:478,3,0	1/1:16,1:16:38.33:445,38,0	1/1:20,0:18:28.60:405,29,0	0/1:25,0:23:8.67:159,0,9	1/1:15,0:12:2.74:12,3,0	1/1:30,3:30:26.93:396,27,0	0/0:12,0:12:7.97:0,8,133	1/1:10,0:10:0.47:1,0,0	0/1:16,3:16:20.70:100,0,21	0/0:15,0:15:24.08:0,24,353	1/1:12,0:10:22.15:264,22,0	1/1:9,1:10:26.44:296,26,0	0/1:2,0:2:33.38:33,0,35
chr10	13775851	.	A	AGG	468.18	PASS	AB=0.959;AC=17;AF=0.315;AN=54;BaseQRankSum=-0.461;DP=465;FS=0.601;HRun=0;HaplotypeScore=143.7801;InbreedingCoeff=-0.1144;MQ=42.13;MQ0=35;MQRankSum=2.265;QD=1.87;ReadPosRankSum=-0.707;VQSLOD=2.4585;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:14:14.34:0,14,226	0/1:7,0:7:7.07:7,0,72	0/0:11,0:4:2.93:0,3,48	0/0:21,0:7:18.04:0,18,247	0/0:14,0:11:3:0,3,26	0/1:15,1:16:0.94:1,0,114	1/1:24,0:21:2.42:104,2,0	0/1:13,0:13:13.47:13,0,67	0/0:12,0:11:9.32:0,9,148	0/0:17,0:15:4.25:0,4,33	./.	0/0:32,0:32:55.04:0,55,772	0/0:15,0:12:7.23:0,7,62	0/0:12,0:12:8.46:0,8,58	0/1:20,2:21:58.25:58,0,84	0/1:24,0:23:82.14:82,0,178	0/1:14,3:16:58.73:126,0,59	0/0:21,0:19:6.42:0,6,92	0/1:24,0:23:2.42:2,0,140	1/1:17,0:14:3.01:47,3,0	0/1:33,0:30:26.88:27,0,66	0/0:12,0:12:9.03:0,9,137	1/1:10,0:10:2.88:15,3,0	0/1:19,0:16:32.41:86,0,32	0/0:17,0:17:27.07:0,27,373	0/1:14,0:12:19.66:20,0,88	0/1:9,2:11:22.53:23,0,79	0/0:2,0:2:5.50:0,6,39
chr10	13778739	.	G	GT	22931.40	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-13.148;DP=698;FS=1.603;HRun=0;HaplotypeScore=66.8668;InbreedingCoeff=0.9881;MQ=82.83;MQ0=0;MQRankSum=-4.410;QD=41.17;ReadPosRankSum=0.098;VQSLOD=5.3330;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:81.23:0,81,1089	1/1:0,14:14:33.11:523,33,0	0/0:17,0:18:30.72:0,31,463	0/0:19,0:20:30.53:0,31,477	1/1:0,33:32:93.18:1394,93,0	1/1:0,19:19:45.15:715,45,0	1/1:0,19:19:45.15:716,45,0	1/1:2,38:40:99:1628,111,0	1/1:1,22:23:57:906,57,0	1/1:0,29:29:87.19:1261,87,0	1/1:0,27:27:72.16:1107,72,0	0/0:35,0:35:99:0,102,1401	1/1:0,33:33:90.31:1427,90,0	1/1:2,23:25:60.20:940,60,0	1/1:0,31:31:78.27:1240,78,0	1/1:0,34:34:84.29:1336,84,0	1/1:1,28:29:69.24:1096,69,0	1/1:1,29:30:78.26:1240,78,0	1/1:0,19:19:57.18:862,57,0	1/1:0,25:25:62.93:935,63,0	1/1:0,18:18:54.18:857,54,0	0/0:20,0:20:57.18:0,57,775	1/1:0,19:19:50.60:775,51,0	1/1:0,21:22:60.19:932,60,0	0/0:20,0:20:60.18:0,60,806	1/1:0,30:30:90.23:1324,90,0	1/1:0,35:35:99:1573,99,0	1/1:0,3:3:9.03:143,9,0
chr10	13780025	.	TTTG	T	21545.09	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=12.772;DP=709;FS=16.184;HRun=0;HaplotypeScore=128.5565;InbreedingCoeff=0.9998;MQ=68.92;MQ0=0;MQRankSum=-4.632;QD=39.17;ReadPosRankSum=2.792;VQSLOD=5.3687;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,114,2220	1/1:1,9:10:29.89:472,30,0	0/0:17,0:17:48.05:0,48,784	0/0:19,0:19:51.08:0,51,895	1/1:0,23:23:68.85:869,69,0	1/1:0,20:20:45.11:717,45,0	1/1:0,21:21:51.17:851,51,0	1/1:4,30:33:87.27:1367,87,0	1/1:4,21:25:75.18:1141,75,0	1/1:0,25:25:75.09:1137,75,0	1/1:0,16:16:42.05:633,42,0	0/0:40,0:40:99:0,117,2435	1/1:2,38:40:90.31:1531,90,0	1/1:5,17:22:63.16:970,63,0	1/1:0,28:28:72.25:1226,72,0	1/1:2,33:35:75.12:1221,75,0	1/1:1,20:21:45.13:722,45,0	1/1:0,28:28:48.11:750,48,0	1/1:1,22:23:66.17:971,66,0	1/1:2,23:25:61.87:859,62,0	1/1:0,29:29:69.14:1065,69,0	0/0:26,0:26:75.22:0,75,1519	1/1:2,23:25:60.63:969,61,0	1/1:0,25:25:54.18:920,54,0	0/0:19,0:19:54.18:0,54,1144	1/1:0,29:29:87.24:1338,87,0	1/1:3,32:35:81.25:1307,81,0	1/1:0,11:11:30.10:511,30,0
chr10	13784582	.	C	CTG	9705.30	PASS	AB=0.674;AC=33;AF=0.611;AN=54;BaseQRankSum=-10.170;DP=683;FS=5.564;HRun=0;HaplotypeScore=83.8624;InbreedingCoeff=0.1125;MQ=66.14;MQ0=12;MQRankSum=1.654;QD=18.49;ReadPosRankSum=-0.186;VQSLOD=4.6333;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:40:66.01:0,66,727	0/1:4,2:6:19.76:132,0,20	./.	0/0:24,0:17:15.02:0,15,150	1/1:3,11:14:24.08:372,24,0	0/1:9,11:21:61.31:449,0,61	0/1:19,19:39:55.25:555,0,55	1/1:10,12:24:39.07:536,39,0	0/1:14,15:29:99:376,0,130	1/1:7,11:18:36.10:522,36,0	1/1:3,1:4:3.01:46,3,0	0/0:39,0:41:75.22:0,75,830	1/1:10,13:23:10.67:597,11,0	1/1:20,25:47:14.59:832,15,0	0/1:11,10:22:98.89:359,0,99	0/1:7,7:13:16.41:214,0,16	0/1:17,14:31:89.70:503,0,90	0/1:14,20:34:17.71:646,0,18	1/1:11,3:14:13.26:157,13,0	1/1:6,3:9:9.03:139,9,0	0/1:31,21:55:91.17:609,0,91	0/0:11,0:12:14.95:0,15,172	1/1:4,6:10:9.03:139,9,0	1/1:13,29:43:52.82:1266,53,0	0/0:11,0:11:18.05:0,18,207	1/1:8,17:25:54.10:743,54,0	0/1:15,10:25:3.71:258,0,4	0/1:7,9:16:44.66:255,0,45
chr10	13786686	.	T	TC	1736.41	PASS	AB=0.929;AC=30;AF=0.536;AN=56;BaseQRankSum=-2.908;DP=469;FS=4.553;HRun=12;HaplotypeScore=82.8830;InbreedingCoeff=-0.2855;MQ=80.24;MQ0=0;MQRankSum=-0.475;QD=4.24;ReadPosRankSum=0.190;VQSLOD=1.6064;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:25:0.40:1,0,0	0/0:2,0:2:2.97:0,3,22	0/0:13,0:13:1.57:0,2,50	0/1:25,0:24:31.36:31,0,92	1/1:12,0:13:5.07:56,5,0	0/0:16,0:16:11.91:0,12,87	0/1:24,0:24:14.22:207,0,14	0/1:23,4:27:24.78:77,0,25	0/1:15,0:15:4.25:81,0,4	1/1:13,0:13:2.60:10,3,0	0/1:9,1:10:13.01:35,0,13	0/1:20,0:21:45.67:46,0,70	0/1:11,3:15:23.95:105,0,24	1/1:16,2:18:4.31:148,4,0	0/1:16,1:17:20.36:85,0,20	0/1:14,12:26:3.40:198,0,3	0/1:20,1:21:6.09:176,0,6	0/1:18,0:18:71.34:99,0,71	0/1:8,1:9:26.09:62,0,26	1/1:12,0:14:11.35:57,11,0	0/1:22,2:24:40.76:41,0,66	1/1:8,0:8:0.47:1,0,0	0/1:13,0:13:10.26:33,0,10	0/1:20,3:23:11.75:216,0,12	0/0:9,0:13:6.08:0,6,18	0/0:14,1:15:8.59:0,9,66	0/1:19,0:18:14.01:105,0,14	1/1:10,0:10:2.88:15,3,0
chr10	13786687	.	C	CT	6490.87	PASS	AB=0.594;AC=42;AF=0.750;AN=56;BaseQRankSum=-5.798;DP=471;FS=3.581;HRun=1;HaplotypeScore=66.8155;InbreedingCoeff=0.7414;MQ=78.31;MQ0=0;MQRankSum=-2.425;QD=17.59;ReadPosRankSum=2.019;VQSLOD=5.3187;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:50.60:0,51,450	1/1:2,0:2:2.79:19,3,0	0/0:11,0:11:26.65:0,27,253	0/0:27,0:23:36.61:0,37,439	1/1:10,3:13:32.63:295,33,0	0/1:6,10:17:8.84:9,0,50	1/1:13,10:24:50.50:604,50,0	1/1:24,3:27:64.70:577,65,0	1/1:3,12:15:15.05:191,15,0	1/1:2,11:13:29.96:263,30,0	1/1:8,1:9:14.92:129,15,0	0/0:20,0:20:40.73:0,41,414	1/1:13,3:16:38.98:361,39,0	1/1:15,4:19:41.86:437,42,0	1/1:4,14:18:13.05:213,13,0	1/1:20,5:25:36.45:439,36,0	1/1:13,9:22:52.60:580,53,0	1/1:14,6:20:27.55:383,28,0	1/1:9,1:10:12.92:153,13,0	1/1:9,4:13:29.80:285,30,0	0/1:7,17:25:12.28:119,0,12	0/0:8,0:8:18.11:0,18,141	1/1:1,12:13:15.01:179,15,0	1/1:15,9:24:31.10:619,31,0	0/0:12,0:12:26.92:0,27,218	1/1:5,10:15:8.28:159,8,0	1/1:8,11:18:37.69:437,38,0	1/1:0,10:10:3.01:40,3,0
chr10	13788865	.	T	TGAGAGAGA	10507.10	PASS	AB=0.674;AC=45;AF=0.804;AN=56;BaseQRankSum=-4.703;DP=784;FS=0.870;HRun=0;HaplotypeScore=232.3759;InbreedingCoeff=0.3820;MQ=65.29;MQ0=21;MQRankSum=-2.449;QD=16.49;ReadPosRankSum=-0.257;VQSLOD=3.9216;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:14,0:38:38.62:213,0,39	1/1:4,1:4:9.03:272,9,0	0/0:37,0:24:15.60:0,16,228	0/0:42,0:28:1.69:0,2,11	0/0:25,1:32:1.31:0,1,4	1/1:14,0:24:1.45:289,1,0	0/1:12,0:24:9.79:122,0,10	1/1:37,0:37:44.25:1167,44,0	1/1:20,7:27:11.42:402,11,0	1/1:40,0:41:48.10:1296,48,0	1/1:20,2:24:5.77:208,6,0	0/0:21,0:35:31.41:0,31,275	1/1:27,5:31:12.02:332,12,0	1/1:17,3:21:15.05:431,15,0	1/1:34,12:50:20.96:742,21,0	1/1:14,8:27:27.09:990,27,0	1/1:15,4:20:3.63:125,4,0	1/1:9,2:11:6.02:168,6,0	1/1:24,1:27:31.07:587,31,0	1/1:20,4:26:6.02:228,6,0	1/1:33,0:29:16:405,16,0	1/1:18,0:24:11.99:122,12,0	1/1:18,0:23:2.45:26,2,0	1/1:14,0:23:3.01:104,3,0	1/1:11,0:21:14.98:161,15,0	1/1:19,0:17:27.09:875,27,0	1/1:31,5:37:35.49:1047,35,0	0/1:7,3:11:2.86:195,0,3
chr10	13789242	.	G	GA	7951.93	PASS	AB=0.930;AC=44;AF=0.786;AN=56;BaseQRankSum=2.549;DP=602;FS=3.204;HRun=9;HaplotypeScore=94.6306;InbreedingCoeff=0.6289;MQ=52.44;MQ0=14;MQRankSum=-6.304;QD=16.23;ReadPosRankSum=-2.420;VQSLOD=4.5327;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:44:91.68:0,92,928	0/1:9,2:11:2:197,0,2	0/1:21,0:11:9.14:9,0,82	0/1:23,0:9:2.62:3,0,64	1/1:7,9:13:24.05:248,24,0	1/1:12,8:20:39.01:399,39,0	1/1:15,15:28:18.78:388,19,0	1/1:11,15:26:54.09:587,54,0	1/1:12,11:21:27.85:482,28,0	1/1:12,9:21:10.08:338,10,0	1/1:7,12:17:28.89:304,29,0	0/0:31,1:32:36.31:0,36,515	1/1:10,7:17:33.09:364,33,0	1/1:13,10:21:3.94:244,4,0	1/1:13,8:20:38.01:402,38,0	1/1:14,17:28:46.14:736,46,0	1/1:13,12:24:39.08:415,39,0	1/1:10,7:15:21.04:223,21,0	1/1:10,7:19:41.70:397,42,0	1/1:10,7:17:14.96:139,15,0	1/1:12,4:15:22.22:211,22,0	0/0:12,0:12:29.02:0,29,238	1/1:7,7:14:20.49:192,20,0	1/1:16,7:22:22.08:471,22,0	0/0:21,0:18:35.89:0,36,304	1/1:10,19:26:69.14:740,69,0	1/1:11,7:17:36.08:389,36,0	0/1:6,1:7:37.08:75,0,37
chr10	13789256	.	GA	G	4959.50	PASS	AB=0.746;AC=38;AF=0.679;AN=56;BaseQRankSum=3.156;DP=598;FS=18.669;HRun=12;HaplotypeScore=91.2310;InbreedingCoeff=0.4696;MQ=56.98;MQ0=6;MQRankSum=-2.862;QD=11.12;ReadPosRankSum=-0.186;VQSLOD=2.5305;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:48:98.99:0,99,966	1/1:6,7:13:23.83:185,24,0	0/0:23,1:14:32.33:0,32,239	0/0:23,0:10:11.70:0,12,89	1/1:9,8:15:3.50:166,3,0	0/1:11,9:20:40.61:233,0,41	1/1:18,9:25:41.78:324,42,0	1/1:12,23:35:37.36:438,37,0	1/1:10,11:20:34.53:249,35,0	1/1:10,11:21:35.82:278,36,0	1/1:11,9:18:26.82:205,27,0	0/0:21,2:24:4.31:0,4,341	0/1:14,3:18:4.67:159,0,5	0/1:15,5:18:63.10:67,0,63	1/1:11,8:17:29.86:232,30,0	1/1:12,14:24:20.31:340,20,0	1/1:15,8:23:44.58:339,45,0	0/1:12,6:17:9.56:118,0,10	0/1:14,4:18:13.46:141,0,13	0/1:4,6:12:11.44:86,0,11	1/1:13,2:15:12.82:154,13,0	0/0:11,0:12:26.89:0,27,258	1/1:9,7:16:22.66:167,23,0	1/1:15,9:24:17.83:318,18,0	0/0:16,1:19:14.59:0,15,316	1/1:19,13:29:56.72:438,57,0	1/1:11,10:20:32.80:254,33,0	1/1:3,2:5:8.96:70,9,0
chr10	13789836	.	CT	C	1755.56	PASS	AB=0.793;AC=41;AF=0.732;AN=56;BaseQRankSum=1.359;DP=550;FS=0.570;HRun=17;HaplotypeScore=72.9778;InbreedingCoeff=0.1391;MQ=71.04;MQ0=4;MQRankSum=2.536;QD=3.72;ReadPosRankSum=5.776;VQSLOD=0.0964;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,2:31:23.81:0,24,329	1/1:5,5:10:8.42:50,8,0	0/0:17,1:14:7.53:0,8,87	0/1:18,0:13:15.28:15,0,18	0/1:19,8:26:24.86:65,0,25	1/1:3,9:14:18.60:95,19,0	1/1:8,8:21:3.48:88,3,0	1/1:13,13:27:24.74:137,25,0	0/1:15,2:17:34.63:35,0,43	1/1:13,2:18:11.56:50,12,0	1/1:13,5:18:8.98:53,9,0	0/0:25,0:26:37.58:0,38,270	1/1:8,6:17:9.11:100,9,0	1/1:12,8:21:13.71:73,14,0	0/1:11,7:20:25.51:40,0,26	1/1:5,13:23:33.38:162,33,0	1/1:14,15:32:22.38:196,22,0	1/1:9,9:17:6.29:113,6,0	0/1:10,4:16:39.72:40,0,45	1/1:12,9:22:15.14:77,15,0	1/1:3,3:6:8.72:50,9,0	0/1:8,2:12:13.15:27,0,13	0/1:10,5:16:7.57:55,0,8	1/1:9,11:20:16.44:99,16,0	0/1:12,1:15:4.52:5,0,45	0/1:13,4:21:4.42:53,0,4	1/1:14,10:25:5.40:116,5,0	1/1:4,9:14:7.39:132,7,0
chr10	13793281	.	CAAT	C	717.26	PASS	AB=0.917;AC=22;AF=0.500;AN=44;BaseQRankSum=1.017;DP=239;FS=3.404;HRun=0;HaplotypeScore=37.1658;InbreedingCoeff=0.4956;MQ=71.76;MQ0=0;MQRankSum=1.337;QD=7.25;ReadPosRankSum=1.691;VQSLOD=1.7111;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:13:24.08:0,24,313	0/0:6,0:6:3.01:0,3,54	./.	./.	0/0:6,0:6:6.02:0,6,114	1/1:6,0:10:3.86:23,4,0	1/1:4,0:5:2.98:21,3,0	0/0:32,0:32:30.10:0,30,452	1/1:4,1:5:3.01:40,3,0	0/0:8,0:8:9.03:0,9,173	0/0:9,0:9:6.02:0,6,115	0/0:5,0:7:6.02:0,6,79	1/1:3,8:11:21.07:276,21,0	1/1:4,1:5:3.01:40,3,0	1/1:4,2:6:6.02:79,6,0	1/1:5,1:6:3.01:40,3,0	0/1:19,0:19:2.41:2,0,582	1/1:5,7:12:15.05:198,15,0	1/1:7,1:8:3.01:40,3,0	./.	0/1:4,1:5:33.49:33,0,47	./.	./.	1/1:4,2:6:6.02:79,6,0	0/0:3,0:6:3.01:0,3,39	0/0:4,0:8:12.04:0,12,157	0/0:12,0:14:12.04:0,12,173	./.
chr10	13794463	.	A	ACAAT	26218.37	PASS	AB=0.509;AC=43;AF=0.768;AN=56;BaseQRankSum=-15.190;DP=711;FS=14.733;HRun=0;HaplotypeScore=83.2120;InbreedingCoeff=0.8776;MQ=65.53;MQ0=5;MQRankSum=1.842;QD=47.07;ReadPosRankSum=3.707;VQSLOD=4.8809;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:59,0:59:99:0,177,2953	1/1:0,6:6:14.65:304,15,0	0/0:17,0:12:31.97:0,32,402	0/0:17,0:16:37.38:0,37,503	1/1:0,27:31:83.33:1802,83,0	1/1:0,21:23:51.18:1471,51,0	1/1:1,19:22:24.08:693,24,0	1/1:2,31:37:68.43:1442,68,0	1/1:1,18:20:24.55:1020,25,0	1/1:1,19:23:65.67:1139,66,0	1/1:0,13:14:35.95:899,36,0	0/0:22,0:22:66.18:0,66,1125	1/1:1,20:22:27.09:779,27,0	0/1:1,26:27:14.56:1249,0,15	1/1:2,24:30:27.33:1362,27,0	1/1:0,28:32:57.20:1640,57,0	1/1:0,35:36:57.20:1645,57,0	1/1:1,18:22:15.79:598,16,0	1/1:0,26:28:83.96:1396,84,0	1/1:1,21:23:61.22:1343,61,0	1/1:1,34:36:54.19:1558,54,0	0/0:14,0:14:39.11:0,39,687	1/1:2,18:20:39:956,39,0	1/1:1,25:26:43.44:1296,43,0	0/0:25,0:25:75.18:0,75,1314	1/1:2,33:36:64.30:2074,64,0	1/1:1,32:33:48.16:1380,48,0	1/1:1,6:7:6.02:173,6,0
chr10	13795007	.	A	AG	5966.64	PASS	AB=0.720;AC=43;AF=0.768;AN=56;BaseQRankSum=-5.862;DP=549;FS=23.269;HRun=9;HaplotypeScore=66.0458;InbreedingCoeff=0.6646;MQ=68.52;MQ0=0;MQRankSum=-1.604;QD=14.21;ReadPosRankSum=0.829;VQSLOD=3.1344;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:62.88:0,63,535	1/1:0,5:5:12.03:133,12,0	0/0:22,0:19:28.69:0,29,278	0/1:12,0:9:3.93:4,0,110	1/1:7,10:17:18.03:190,18,0	1/1:5,11:17:18.01:186,18,0	1/1:3,17:20:30:305,30,0	1/1:4,9:13:27.03:277,27,0	1/1:7,21:29:39.10:431,39,0	1/1:8,6:14:18.04:191,18,0	0/1:8,5:14:15.15:145,0,15	0/0:35,0:35:71.85:0,72,609	1/1:5,15:20:7.03:304,7,0	1/1:2,15:17:27.07:299,27,0	1/1:8,14:22:30.08:332,30,0	1/1:7,14:21:27.07:299,27,0	1/1:4,18:22:42.11:464,42,0	1/1:11,17:28:5.84:513,6,0	1/1:14,5:19:3.49:184,3,0	1/1:10,11:21:24.02:251,24,0	1/1:3,12:16:34.58:354,35,0	0/0:18,0:18:35.97:0,36,310	1/1:2,7:9:9.02:100,9,0	1/1:6,13:19:18.05:199,18,0	0/0:22,0:21:50.98:0,51,443	1/1:14,10:24:6.98:282,7,0	1/1:5,16:21:33.09:365,33,0	0/1:3,11:15:5.10:159,0,5
chr10	13796682	.	GA	G	1890.41	PASS	AB=0.636;AC=37;AF=0.804;AN=46;BaseQRankSum=4.337;DP=216;FS=0.990;HRun=9;HaplotypeScore=25.0138;InbreedingCoeff=0.5504;MQ=37.98;MQ0=26;MQRankSum=-5.829;QD=11.19;ReadPosRankSum=-2.465;VQSLOD=0.6352;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:11:27.08:0,27,312	1/1:0,1:1:3:27,3,0	./.	./.	1/1:5,3:7:6:55,6,0	1/1:4,6:8:12.01:110,12,0	1/1:2,4:6:12:110,12,0	1/1:7,23:25:60.02:548,60,0	1/1:3,5:8:6:55,6,0	./.	1/1:2,5:6:6:55,6,0	0/0:7,0:7:12.04:0,12,139	1/1:1,7:8:9:82,9,0	1/1:1,3:4:3:27,3,0	1/1:4,7:10:12:108,12,0	1/1:0,11:9:15.01:137,15,0	1/1:8,8:13:20.04:171,20,0	1/1:5,11:13:15:137,15,0	1/1:2,6:7:17.98:158,18,0	./.	1/1:3,2:3:3:27,3,0	0/0:4,0:4:6.02:0,6,69	1/1:1,0:1:3:27,3,0	1/1:2,1:2:3:27,3,0	0/0:8,0:7:21.06:0,21,242	0/1:3,4:7:7.93:66,0,8	1/1:2,6:7:12:108,12,0	./.
chr10	13796699	.	A	AAAAT	1911.91	PASS	AC=40;AF=1.000;AN=40;DP=191;FS=0.000;HRun=0;HaplotypeScore=46.7184;InbreedingCoeff=-0.1010;MQ=33.63;MQ0=20;QD=11.18;VQSLOD=1.4306;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,5:11:12.04:283,12,0	1/1:1,0:1:3.01:52,3,0	./.	./.	1/1:5,0:4:2.99:24,3,0	1/1:8,0:7:11.96:162,12,0	./.	1/1:39,0:35:23.82:199,24,0	./.	1/1:3,0:2:6:53,6,0	1/1:5,0:4:3.01:50,3,0	1/1:5,0:5:3:25,3,0	1/1:7,0:7:5.95:54,6,0	1/1:3,0:3:2.98:21,3,0	1/1:8,0:8:11.77:107,12,0	1/1:9,0:8:5.95:70,6,0	1/1:13,0:10:8.96:110,9,0	1/1:15,0:10:11.96:172,12,0	1/1:11,0:10:8.78:83,9,0	1/1:1,0:1:3.01:50,3,0	./.	./.	./.	./.	1/1:4,3:7:6.02:141,6,0	1/1:4,0:4:3.01:51,3,0	1/1:5,0:5:9.03:139,9,0	1/1:7,0:7:9.03:143,9,0
chr10	13796742	.	A	AATTTT	4979.34	PASS	AB=0.962;AC=42;AF=0.750;AN=56;BaseQRankSum=3.444;DP=247;FS=33.088;HRun=0;HaplotypeScore=67.8651;InbreedingCoeff=0.6659;MQ=67.12;MQ0=0;MQRankSum=-1.886;QD=24.90;ReadPosRankSum=1.129;VQSLOD=2.6804;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:29.97:0,30,424	1/1:3,1:4:11.78:145,12,0	0/0:10,0:9:26.10:0,26,467	0/0:3,0:3:2.98:0,3,21	1/1:8,0:8:23.39:260,23,0	1/1:9,0:11:28.88:280,29,0	1/1:4,0:4:8.60:69,9,0	1/1:29,0:29:35.99:559,36,0	1/1:3,0:3:8.55:43,9,0	1/1:12,0:11:32.76:307,33,0	1/1:7,1:8:2.12:191,2,0	0/0:11,0:11:33.11:0,33,705	0/1:8,0:8:8.81:169,0,9	1/1:4,0:4:6.75:74,7,0	0/1:11,0:11:6.24:236,0,6	1/1:7,1:7:17.66:200,18,0	1/1:16,0:15:42.25:380,42,0	1/1:11,3:11:26.94:377,27,0	1/1:11,1:12:31.68:332,32,0	1/1:7,1:8:20.52:244,21,0	1/1:3,0:2:6.01:82,6,0	0/0:2,0:2:6.02:0,6,114	1/1:5,0:5:14.80:155,15,0	1/1:3,0:3:5.88:67,6,0	0/0:10,0:10:27.04:0,27,477	1/1:6,1:7:17.66:165,18,0	1/1:5,2:7:20.74:290,21,0	1/1:12,2:14:37.54:353,38,0
chr10	13797818	.	TACACACACACACAC	T	701.57	PASS	AB=0.875;AC=6;AF=0.273;AN=22;BaseQRankSum=0.922;DP=111;FS=3.173;HRun=0;HaplotypeScore=59.8516;InbreedingCoeff=0.2094;MQ=48.42;MQ0=14;MQRankSum=0.751;QD=19.49;ReadPosRankSum=-3.389;VQSLOD=0.2448;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:19:27.09:0,27,1577	./.	./.	./.	./.	0/0:0,0:1:3.01:0,3,35	./.	1/1:10,8:15:23.87:303,24,0	./.	0/0:1,0:1:2.98:0,3,21	./.	0/0:5,0:5:3.01:0,3,194	./.	./.	./.	./.	0/0:11,0:12:9.03:0,9,146	0/1:9,0:7:99:172,0,267	./.	./.	./.	./.	./.	./.	0/0:7,0:13:14.75:0,15,721	0/0:1,1:2:3.01:0,3,68	1/1:2,0:3:3.01:109,3,0	0/1:4,2:5:43.42:216,0,43
chr10	13798847	.	A	ACC	6417.43	PASS	AB=0.625;AC=43;AF=0.768;AN=56;BaseQRankSum=-5.813;DP=591;FS=3.988;HRun=8;HaplotypeScore=95.9167;InbreedingCoeff=0.8334;MQ=77.39;MQ0=2;MQRankSum=-2.995;QD=15.21;ReadPosRankSum=1.107;VQSLOD=2.7015;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:81.17:0,81,887	0/1:2,3:5:6.76:42,0,7	0/0:44,0:36:55.49:0,55,548	0/0:37,0:31:50.50:0,50,505	1/1:7,17:24:36.08:543,36,0	1/1:5,0:21:21.75:92,22,0	1/1:2,0:15:24.95:86,25,0	1/1:12,14:27:24.02:301,24,0	1/1:1,18:21:24.08:381,24,0	1/1:7,6:13:9.02:120,9,0	1/1:4,9:14:12:182,12,0	0/0:26,0:26:66.14:0,66,724	1/1:10,17:28:17.33:238,17,0	1/1:7,14:22:27.05:369,27,0	1/1:4,16:20:20.35:294,20,0	1/1:4,17:23:20.56:294,21,0	1/1:2,29:32:41.59:607,42,0	1/1:0,9:9:18.06:286,18,0	1/1:18,2:23:42.70:387,43,0	1/1:7,10:18:23.95:296,24,0	1/1:10,16:30:29.57:415,30,0	0/0:13,0:13:39.11:0,39,434	1/1:5,0:6:2.50:9,2,0	1/1:3,15:21:25.58:350,26,0	0/0:13,0:13:36.09:0,36,401	1/1:4,12:18:33.08:477,33,0	1/1:9,19:28:41.62:601,42,0	1/1:1,2:3:3.01:48,3,0
chr10	13799166	.	A	AAAAT	3514.16	PASS	AB=1.000;AC=30;AF=0.536;AN=56;BaseQRankSum=8.879;DP=378;FS=6.939;HRun=0;HaplotypeScore=70.9102;InbreedingCoeff=-0.2451;MQ=71.96;MQ0=1;MQRankSum=-0.036;QD=12.37;ReadPosRankSum=-3.104;VQSLOD=1.4521;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:24:54.16:0,54,827	1/1:2,0:2:3.01:47,3,0	1/1:14,0:12:2.22:7,2,0	0/0:8,0:7:2.99:0,3,25	0/1:17,0:17:24.91:180,0,25	0/1:10,0:10:33.95:146,0,34	1/1:9,0:9:9.03:158,9,0	0/0:42,0:42:43.47:0,43,349	1/1:11,0:11:15.05:228,15,0	1/1:12,0:12:17.89:234,18,0	0/1:8,0:8:34.92:94,0,35	0/0:10,0:10:12.03:0,12,172	0/1:11,0:11:7.93:180,0,8	0/1:13,0:13:6.92:220,0,7	0/1:13,0:13:56.87:124,0,57	0/1:12,0:12:15.95:95,0,16	0/1:21,0:21:28.06:72,0,28	0/1:19,0:19:44.08:390,0,44	0/1:16,0:16:61.64:130,0,62	0/1:12,0:12:35.48:35,0,63	0/1:10,0:10:15.95:86,0,16	0/0:9,0:9:12.01:0,12,147	0/1:4,0:4:32.94:39,0,33	1/1:9,0:9:6.02:95,6,0	1/1:7,6:13:3.01:73,3,0	0/1:17,0:17:27.21:301,0,27	0/1:18,0:18:31.92:132,0,32	0/1:13,0:13:12.84:447,0,13
chr10	13799186	.	T	TAAAG	1538.27	PASS	AB=1.000;AC=26;AF=0.464;AN=56;BaseQRankSum=10.375;DP=373;FS=4.765;HRun=0;HaplotypeScore=76.5313;InbreedingCoeff=-0.2343;MQ=60.07;MQ0=5;MQRankSum=1.410;QD=6.38;ReadPosRankSum=9.271;VQSLOD=0.2521;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:25:72.14:0,72,1143	1/1:3,0:3:2.98:22,3,0	0/0:12,0:5:6.88:0,7,57	0/0:7,0:6:4.92:0,5,72	0/1:11,0:11:74.54:75,0,110	1/1:2,8:10:9.49:215,9,0	1/1:1,12:13:9.03:212,9,0	0/0:51,0:50:99:0,120,1291	1/1:10,0:10:14.91:110,15,0	0/1:9,0:9:48.23:54,0,48	0/1:9,0:9:35.20:35,0,115	0/0:9,0:9:20.98:0,21,295	0/1:7,0:7:32.47:94,0,32	0/1:13,0:13:31.22:95,0,31	0/1:14,0:14:40.52:41,0,195	0/1:12,0:12:40.16:45,0,40	0/1:20,0:20:51.59:52,0,87	0/1:20,0:20:68.17:166,0,68	0/0:23,0:22:6.33:0,6,404	0/1:7,0:7:4.54:5,0,172	0/1:8,0:8:36.02:36,0,40	0/0:4,0:4:12.04:0,12,212	0/1:3,0:3:14.49:14,0,73	1/1:8,0:8:5.97:46,6,0	0/1:13,0:13:34.52:35,0,64	0/1:17,0:17:91.26:91,0,205	0/1:16,0:16:63.58:64,0,77	0/1:18,0:18:87.26:201,0,87
chr10	13799190	.	T	TAAAG	7234.27	PASS	AB=1.000;AC=47;AF=0.839;AN=56;BaseQRankSum=7.158;DP=389;FS=1.385;HRun=0;HaplotypeScore=62.4832;InbreedingCoeff=0.4954;MQ=60.12;MQ0=5;MQRankSum=1.187;QD=20.61;ReadPosRankSum=0.182;VQSLOD=4.4773;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:25:74.88:0,75,996	1/1:0,4:4:8.86:106,9,0	0/1:12,0:5:9.99:10,0,24	0/1:6,0:5:1.23:1,0,4	1/1:1,10:12:26.73:379,27,0	1/1:11,0:11:12.50:239,12,0	1/1:13,0:13:14.97:254,15,0	1/1:50,0:49:82.29:695,82,0	1/1:1,9:10:15.05:346,15,0	1/1:2,10:12:33.06:528,33,0	1/1:4,9:13:20.66:230,21,0	0/0:8,0:8:23.95:0,24,295	1/1:3,5:8:12.04:279,12,0	1/1:1,10:12:15.05:362,15,0	1/1:6,7:13:9.03:217,9,0	1/1:1,11:12:6.02:146,6,0	1/1:4,0:20:15.05:244,15,0	1/1:4,16:20:9.28:640,9,0	1/1:13,9:22:19.28:389,19,0	1/1:4,4:8:5.95:90,6,0	1/1:1,9:11:6.02:145,6,0	0/0:4,0:4:6.02:0,6,107	1/1:1,2:3:3.01:72,3,0	1/1:0,8:9:6.02:145,6,0	0/1:12,0:12:32.53:33,0,85	1/1:3,15:19:48.02:755,48,0	1/1:3,13:16:8.50:216,9,0	1/1:4,18:22:21.29:711,21,0
chr10	13799596	.	T	TGTGC	9111.25	PASS	AB=1.000;AC=43;AF=0.768;AN=56;BaseQRankSum=1.568;DP=502;FS=2.714;HRun=0;HaplotypeScore=155.6264;InbreedingCoeff=0.6726;MQ=50.19;MQ0=3;MQRankSum=-4.708;QD=21.95;ReadPosRankSum=1.322;VQSLOD=4.7007;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,108,1587	1/1:9,0:9:14.90:186,15,0	0/1:11,0:5:13.98:32,0,14	0/0:11,0:8:7.22:0,7,98	1/1:21,0:21:30.10:639,30,0	0/1:16,0:17:57.39:57,0,108	0/1:19,0:18:58.56:125,0,59	1/1:20,0:20:43.03:479,43,0	1/1:10,0:9:14.86:130,15,0	1/1:16,0:16:36.36:545,36,0	1/1:23,0:23:26.13:242,26,0	0/0:20,0:20:44.68:0,45,857	1/1:19,0:19:18.29:294,18,0	1/1:23,0:23:47.43:633,47,0	1/1:16,0:16:34.80:483,35,0	1/1:20,0:20:36.01:373,36,0	1/1:20,3:23:56.66:903,57,0	1/1:22,1:23:43.41:806,43,0	1/1:17,0:17:36.58:383,37,0	1/1:16,0:16:24.04:428,24,0	1/1:25,0:23:27.12:427,27,0	0/0:7,0:7:18.01:0,18,281	1/1:13,0:13:20.86:283,21,0	1/1:18,2:20:21.01:373,21,0	0/0:8,0:9:24.07:0,24,413	1/1:27,0:26:49.60:487,50,0	1/1:9,0:9:26.50:307,26,0	1/1:17,0:17:25.66:495,26,0
chr10	13799606	.	CGTGTGTGT	C	5891.26	PASS	AB=0.774;AC=39;AF=0.750;AN=52;BaseQRankSum=9.882;DP=454;FS=10.971;HRun=0;HaplotypeScore=180.6362;InbreedingCoeff=0.5529;MQ=46.16;MQ0=4;MQRankSum=-8.727;QD=17.18;ReadPosRankSum=3.195;VQSLOD=3.1786;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:44:96.33:0,96,3701	1/1:4,0:9:3.01:56,3,0	./.	0/0:9,1:5:6.02:0,6,227	1/1:15,3:21:2.97:20,3,0	0/1:6,0:11:2.45:2,0,21	0/1:12,0:17:54.41:86,0,54	1/1:6,0:14:13.28:237,13,0	1/1:3,7:9:9.03:232,9,0	1/1:7,8:16:30.10:702,30,0	1/1:6,10:17:9.03:231,9,0	0/0:22,0:22:45.63:0,46,1792	1/1:5,8:16:21.91:468,22,0	1/1:9,6:22:24.07:543,24,0	1/1:6,5:13:15.05:364,15,0	1/1:7,7:15:15.05:386,15,0	1/1:15,6:23:10.25:269,10,0	1/1:14,4:20:11.32:434,11,0	1/1:11,1:13:6.02:127,6,0	./.	1/1:20,2:24:4.59:91,5,0	0/0:4,0:4:12.04:0,12,488	1/1:6,4:11:3.01:77,3,0	0/1:20,3:23:9.21:9,0,86	0/0:10,0:10:24.08:0,24,811	1/1:7,7:19:39.13:912,39,0	1/1:3,5:8:17.95:389,18,0	1/1:9,1:17:12.04:256,12,0
chr10	13799618	.	T	TGCGCGCGCGCGC	4983.37	PASS	AB=1.000;AC=18;AF=0.321;AN=56;BaseQRankSum=-2.759;DP=487;FS=4.340;HRun=0;HaplotypeScore=232.3989;InbreedingCoeff=-0.3424;MQ=47.06;MQ0=6;MQRankSum=-3.764;QD=18.06;ReadPosRankSum=-4.111;VQSLOD=3.0505;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,108,3996	0/0:11,0:11:8.99:0,9,179	0/0:14,0:7:20.92:0,21,428	0/0:23,0:14:27.08:0,27,873	0/0:19,0:19:14.83:0,15,230	0/0:15,0:15:25.52:0,26,599	0/0:17,0:16:19.77:0,20,655	1/1:18,0:18:5.88:911,6,0	0/1:13,0:12:99:196,0,148	0/1:17,0:16:85.49:728,0,85	0/1:17,0:17:21.45:21,0,230	0/0:20,0:20:51.18:0,51,1901	0/1:15,0:15:99:199,0,218	0/1:18,0:18:99:226,0,249	0/1:19,0:19:99:113,0,298	0/1:14,0:14:20.12:20,0,192	0/1:21,0:21:99:185,0,385	0/1:20,0:20:99:513,0,236	0/1:7,0:7:33.87:272,0,34	0/1:14,0:14:84.91:85,0,109	0/1:22,0:21:38.98:39,0,195	0/0:6,0:6:18.06:0,18,649	0/1:14,0:14:69.32:86,0,69	0/0:18,9:31:18.53:0,19,511	0/0:14,0:14:36.12:0,36,1309	0/1:17,0:17:99:827,0,171	0/1:14,0:14:99:178,0,295	0/1:16,0:16:99:385,0,101
chr10	13800376	.	GT	G	8667.50	PASS	AB=1.000;AC=45;AF=0.804;AN=56;BaseQRankSum=5.310;DP=512;FS=9.248;HRun=9;HaplotypeScore=59.4143;InbreedingCoeff=0.9187;MQ=75.57;MQ0=0;MQRankSum=-2.477;QD=20.64;ReadPosRankSum=1.687;VQSLOD=5.1919;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,1:37:77.69:0,78,1107	1/1:0,8:8:24.01:220,24,0	0/1:25,0:19:2.50:2,0,255	0/0:14,0:12:13.09:0,13,220	1/1:1,14:15:36:328,36,0	1/1:0,21:21:63.03:577,63,0	1/1:2,17:19:44.88:412,45,0	1/1:2,20:22:54.02:494,54,0	1/1:3,15:18:42.02:384,42,0	1/1:2,15:17:45.02:412,45,0	1/1:2,12:14:36.02:329,36,0	0/0:21,0:23:59.84:0,60,651	1/1:3,14:17:33:297,33,0	1/1:1,10:11:30.02:274,30,0	1/1:1,12:13:27.01:247,27,0	1/1:3,20:23:54.03:494,54,0	1/1:2,27:28:72.04:659,72,0	1/1:3,27:30:66.03:604,66,0	1/1:7,15:22:40.65:382,41,0	1/1:5,11:16:29.45:273,29,0	1/1:0,11:11:30.02:275,30,0	0/0:6,0:6:15.04:0,15,173	1/1:1,11:11:26.88:247,27,0	1/1:2,16:18:42.02:384,42,0	0/0:12,0:12:36.11:0,36,415	1/1:2,13:15:39.02:357,39,0	1/1:4,30:34:87.04:796,87,0	1/1:0,10:10:24.01:219,24,0
chr10	13802363	.	CTT	C	5572.54	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=3.196;DP=453;FS=0.528;HRun=15;HaplotypeScore=60.2970;InbreedingCoeff=0.8445;MQ=71.37;MQ0=6;MQRankSum=0.393;QD=15.88;ReadPosRankSum=5.236;VQSLOD=3.8563;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:31:75.79:0,76,839	1/1:2,7:9:20.96:185,21,0	0/0:19,0:9:8.31:0,8,89	0/0:19,0:12:9.01:0,9,100	1/1:7,16:24:23.79:357,24,0	1/1:5,7:12:20.90:185,21,0	1/1:4,7:11:20.93:185,21,0	1/1:14,19:34:46.95:466,47,0	1/1:6,5:12:17.38:132,17,0	1/1:6,13:19:35.77:310,36,0	1/1:1,18:20:44.84:440,45,0	0/0:16,0:16:27.03:0,27,308	1/1:4,4:9:14.65:116,15,0	1/1:2,9:11:23.99:211,24,0	1/1:3,10:13:6.77:191,7,0	1/1:3,13:16:31.63:288,32,0	1/1:5,18:24:53.64:461,54,0	1/1:3,12:15:35.97:317,36,0	1/1:5,8:14:19.71:194,20,0	1/1:5,14:20:29.67:308,30,0	1/1:5,3:8:5.91:53,6,0	0/0:6,0:6:9.02:0,9,106	1/1:2,4:6:2.96:26,3,0	1/1:3,4:7:11.98:106,12,0	0/0:10,0:10:21.04:0,21,254	1/1:6,12:19:35.84:317,36,0	1/1:4,24:34:49.72:538,50,0	1/1:5,8:13:3.56:188,4,0
chr10	13805410	.	A	AC	5212.04	PASS	AB=1.000;AC=43;AF=0.796;AN=54;BaseQRankSum=-4.016;DP=403;FS=2.939;HRun=1;HaplotypeScore=54.9138;InbreedingCoeff=0.7947;MQ=71.20;MQ0=2;MQRankSum=-0.641;QD=16.65;ReadPosRankSum=1.494;VQSLOD=5.1395;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:24:34.98:0,35,296	1/1:3,0:3:9.01:93,9,0	0/1:33,0:11:5.58:6,0,41	0/0:19,0:8:7.05:0,7,66	1/1:13,0:13:29.09:222,29,0	1/1:11,1:12:29.18:236,29,0	1/1:2,13:14:2.97:20,3,0	1/1:25,0:25:65.81:544,66,0	1/1:11,0:10:23.25:181,23,0	1/1:19,0:19:44.26:407,44,0	1/1:14,0:14:35.80:309,36,0	0/0:15,0:15:26.01:0,26,205	./.	1/1:8,0:8:17.98:152,18,0	1/1:15,0:15:38.92:338,39,0	1/1:10,0:9:18:157,18,0	1/1:18,0:18:41.43:326,41,0	1/1:11,0:11:29.01:237,29,0	1/1:22,1:23:40.36:424,40,0	1/1:16,0:16:47.72:392,48,0	1/1:11,0:11:18:159,18,0	0/0:9,0:10:19.76:0,20,153	1/1:10,0:10:20.43:189,20,0	1/1:10,0:10:23.95:202,24,0	0/0:13,0:13:29.89:0,30,261	1/1:16,0:16:38.02:320,38,0	1/1:8,0:8:1.09:81,1,0	1/1:11,0:11:26.95:219,27,0
chr10	13805411	.	C	CCA	5177.11	PASS	AB=1.000;AC=45;AF=0.804;AN=56;BaseQRankSum=-4.927;DP=437;FS=4.560;HRun=0;HaplotypeScore=78.4621;InbreedingCoeff=0.5126;MQ=70.91;MQ0=2;MQRankSum=0.750;QD=13.11;ReadPosRankSum=0.475;VQSLOD=4.3108;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:29:21.99:22,0,261	1/1:4,0:4:9.01:93,9,0	0/1:34,0:11:3.99:4,0,53	0/1:22,0:9:2.76:3,0,66	1/1:13,0:14:29.07:217,29,0	1/1:12,0:12:23.09:224,23,0	1/1:16,0:16:0.58:10,1,0	1/1:2,21:26:65.81:565,66,0	1/1:13,0:12:24.26:183,24,0	1/1:19,0:19:44.75:408,45,0	1/1:13,0:14:36.79:330,37,0	0/0:14,0:15:8.99:0,9,184	0/1:10,0:11:0:0,0,0	1/1:10,0:10:17.98:152,18,0	1/1:15,0:15:39.46:339,39,0	1/1:9,0:9:18:157,18,0	1/1:14,0:16:34.94:307,35,0	1/1:12,0:13:27.69:232,28,0	1/1:26,0:28:24.18:407,24,0	1/1:14,0:16:47.09:379,47,0	1/1:10,0:10:18.08:159,18,0	0/0:9,0:10:3.50:0,4,133	1/1:8,0:9:21.22:184,21,0	1/1:10,0:11:22.23:193,22,0	0/0:17,0:17:28.35:0,28,273	1/1:16,0:17:35.87:308,36,0	0/1:11,0:11:4.93:80,0,5	1/1:13,0:13:27.89:220,28,0
chr10	13805825	.	CT	C	2963.20	PASS	AB=0.683;AC=31;AF=0.554;AN=56;BaseQRankSum=5.168;DP=516;FS=0.000;HRun=14;HaplotypeScore=58.5105;InbreedingCoeff=0.3347;MQ=54.74;MQ0=14;MQRankSum=0.386;QD=8.93;ReadPosRankSum=2.910;VQSLOD=2.8312;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,2:49:50.34:0,50,781	1/1:2,9:11:20.82:144,21,0	0/0:37,0:12:19.37:0,19,141	0/0:30,0:13:6.22:0,6,65	1/1:10,8:18:25.45:170,25,0	0/0:14,0:13:7.89:0,8,227	0/0:11,0:11:6.39:0,6,185	1/1:19,11:30:14.01:216,14,0	0/1:11,8:18:5.45:203,0,5	1/1:6,10:16:22.53:149,23,0	0/1:5,4:9:29.13:29,0,44	0/0:14,0:13:28.63:0,29,231	1/1:1,9:10:11.77:76,12,0	1/1:10,7:16:1.49:145,1,0	1/1:4,11:15:34.93:233,35,0	0/0:19,0:19:19.03:0,19,305	1/1:9,17:24:55.41:368,55,0	1/1:7,11:18:34.63:227,35,0	0/1:9,10:19:22.78:152,0,23	0/1:7,7:16:14.01:130,0,14	0/1:3,7:9:2.07:102,0,2	0/1:8,0:8:5.53:6,0,95	0/1:4,11:15:7.40:102,0,7	1/1:5,15:19:10.80:217,11,0	0/0:10,0:10:23.96:0,24,208	0/1:12,12:24:33.39:260,0,33	0/1:6,9:14:22.58:138,0,23	1/1:5,5:10:13.90:88,14,0
chr10	13805924	.	C	CCCT	9271.93	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=9.607;DP=479;FS=41.407;HRun=0;HaplotypeScore=128.0287;InbreedingCoeff=0.9568;MQ=60.73;MQ0=14;MQRankSum=-11.575;QD=30.70;ReadPosRankSum=1.777;VQSLOD=3.1540;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:87.29:0,87,1425	1/1:7,0:7:20.38:300,20,0	0/0:40,0:23:50.38:0,50,652	0/0:50,0:14:27.31:0,27,381	1/1:16,0:16:33.73:579,34,0	1/1:7,7:13:26.87:322,27,0	1/1:4,3:6:5.93:40,6,0	1/1:12,0:12:36.12:649,36,0	1/1:15,1:15:38.09:418,38,0	1/1:9,0:9:21.02:332,21,0	1/1:7,9:15:20.86:292,21,0	0/0:19,0:19:57.19:0,57,949	1/1:12,1:13:35.79:442,36,0	1/1:4,11:13:11.90:127,12,0	1/1:19,0:19:47.92:803,48,0	1/1:14,0:14:35.91:490,36,0	1/1:23,0:19:35.94:483,36,0	1/1:7,1:5:12:142,12,0	1/1:12,0:8:20.91:244,21,0	1/1:17,7:24:50.85:717,51,0	1/1:9,0:8:14.89:222,15,0	0/0:15,0:15:45.14:0,45,724	1/1:17,0:17:46.42:699,46,0	1/1:9,1:10:21.04:364,21,0	0/0:22,0:22:66.21:0,66,1061	1/1:19,1:20:56.94:788,57,0	1/1:7,0:6:17.99:230,18,0	1/1:12,2:14:38.88:590,39,0
chr10	13805925	.	C	CCTCCTTTT	11712.17	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=6.503;DP=479;FS=32.821;HRun=0;HaplotypeScore=154.2529;InbreedingCoeff=0.9319;MQ=60.73;MQ0=11;MQRankSum=-10.981;QD=39.30;ReadPosRankSum=1.589;VQSLOD=2.8803;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:90.27:0,90,2361	1/1:7,0:7:13.70:411,14,0	0/0:42,0:23:61.71:0,62,984	0/0:52,0:16:30.99:0,31,588	1/1:16,0:16:29.12:880,29,0	1/1:14,0:13:20.92:271,21,0	1/1:6,0:5:4.52:24,5,0	1/1:1,10:12:36.12:946,36,0	1/1:15,0:14:19.69:395,20,0	1/1:9,0:9:20.04:486,20,0	1/1:16,0:15:15.06:357,15,0	0/0:19,0:19:57.20:0,57,1573	1/1:13,0:13:24.90:506,25,0	1/1:15,0:13:8.11:82,8,0	1/1:19,0:19:41.99:1191,42,0	1/1:14,0:14:30.96:519,31,0	1/1:21,0:19:31.53:557,32,0	1/1:8,0:5:11.37:105,11,0	1/1:12,0:8:20.04:278,20,0	1/1:24,0:24:41.43:870,41,0	1/1:4,4:8:12.09:306,12,0	0/0:15,0:15:45.15:0,45,1243	1/1:17,0:17:28.61:886,29,0	1/1:8,2:11:22.89:636,23,0	0/0:22,0:22:66.23:0,66,1705	1/1:20,0:20:53.17:1021,53,0	1/1:7,0:6:16.02:284,16,0	1/1:14,0:14:34.82:701,35,0
chr10	13805926	.	CTTTTCTTT	C	11276.45	PASS	AB=0.778;AC=43;AF=0.768;AN=56;BaseQRankSum=11.106;DP=477;FS=30.470;HRun=0;HaplotypeScore=151.0371;InbreedingCoeff=0.8782;MQ=60.75;MQ0=10;MQRankSum=-11.455;QD=38.49;ReadPosRankSum=3.254;VQSLOD=2.8430;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:84.71:0,85,3374	1/1:0,3:7:21.07:383,21,0	0/0:42,0:23:54.91:0,55,1250	0/0:54,0:17:38.93:0,39,991	1/1:1,10:15:36.12:526,36,0	1/1:7,7:13:27.09:548,27,0	0/1:5,2:6:83.45:137,0,83	1/1:12,0:12:33.08:409,33,0	1/1:1,10:14:39.12:792,39,0	1/1:1,4:9:21.07:389,21,0	1/1:10,6:15:21.07:364,21,0	0/0:19,0:19:57.20:0,57,1818	1/1:2,8:12:36.12:711,36,0	1/1:11,4:13:12.03:244,12,0	1/1:5,4:19:42.14:745,42,0	1/1:5,7:14:33.03:616,33,0	1/1:6,8:19:33.11:650,33,0	1/1:4,3:5:12.04:268,12,0	1/1:4,4:8:15.05:328,15,0	1/1:10,14:24:45.15:823,45,0	1/1:4,4:8:15.05:259,15,0	0/0:15,0:15:45.15:0,45,1737	1/1:2,6:16:42.13:689,42,0	1/1:5,4:10:20.33:302,20,0	0/0:23,0:23:69.24:0,69,2436	1/1:2,10:19:54.17:1072,54,0	1/1:0,5:6:18.06:386,18,0	1/1:3,6:14:36.12:636,36,0
chr10	13805937	.	C	CT	2968.34	PASS	AB=0.752;AC=35;AF=0.625;AN=56;BaseQRankSum=9.128;DP=499;FS=31.816;HRun=3;HaplotypeScore=153.0284;InbreedingCoeff=0.2908;MQ=63.94;MQ0=9;MQRankSum=-6.634;QD=10.10;ReadPosRankSum=0.423;VQSLOD=-0.0792;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:89.59:0,90,1033	0/1:7,2:9:7.90:104,0,8	0/0:51,0:28:18.81:0,19,487	0/0:62,0:24:20.99:0,21,276	0/1:8,10:18:40.09:40,0,44	1/1:4,8:11:19.50:184,19,0	1/1:6,2:8:15.47:146,15,0	0/1:12,1:12:63.90:72,0,64	1/1:5,10:14:17.86:227,18,0	0/1:8,4:12:9.73:137,0,10	1/1:9,6:15:9.50:113,9,0	0/0:18,0:18:51.16:0,51,611	1/1:3,8:11:5.58:178,6,0	1/1:9,5:12:17.91:144,18,0	0/1:10,5:15:35.68:106,0,36	1/1:5,9:14:10.17:181,10,0	0/1:11,8:18:5.72:174,0,6	1/1:5,3:5:12.03:125,12,0	1/1:5,4:5:12:108,12,0	1/1:9,14:23:16.08:232,16,0	0/1:5,4:9:5.10:39,0,5	0/0:18,0:18:54.16:0,54,641	0/1:9,6:15:22.48:82,0,22	0/1:9,4:13:33.02:74,0,33	0/0:23,0:23:66.20:0,66,791	1/1:12,10:22:16.33:410,16,0	1/1:3,5:7:10.53:137,11,0	1/1:5,7:12:3.47:147,3,0
chr10	13806132	.	T	TGGG	10609.98	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=11.662;DP=534;FS=0.000;HRun=8;HaplotypeScore=173.4467;InbreedingCoeff=0.8854;MQ=81.73;MQ0=0;MQRankSum=-13.826;QD=27.28;ReadPosRankSum=-4.433;VQSLOD=0.7394;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,114,1492	1/1:4,1:7:13.27:195,13,0	0/0:27,0:28:52.51:0,53,754	0/0:20,0:17:33.01:0,33,385	1/1:8,1:10:3.01:30,3,0	1/1:4,0:15:35.53:260,36,0	1/1:11,0:24:44.87:376,45,0	1/1:17,2:21:23.95:256,24,0	1/1:15,8:26:62.94:998,63,0	1/1:10,3:15:15.03:247,15,0	1/1:3,1:4:3.01:60,3,0	0/0:27,0:27:56.73:0,57,981	1/1:14,8:23:38.37:653,38,0	1/1:16,8:25:69.16:1132,69,0	1/1:7,11:20:48.08:809,48,0	1/1:10,9:23:63.09:984,63,0	1/1:13,9:24:57.04:905,57,0	1/1:9,5:15:33.09:608,33,0	1/1:10,7:17:24.08:441,24,0	1/1:12,6:20:26.93:408,27,0	1/1:21,3:26:29.72:354,30,0	0/0:20,0:20:54.17:0,54,709	1/1:6,4:14:26.97:343,27,0	1/1:13,10:25:51.33:786,51,0	0/0:9,0:9:27.09:0,27,354	1/1:14,7:21:27.04:461,27,0	1/1:6,2:8:3.01:60,3,0	1/1:1,4:5:12.04:242,12,0
chr10	13806150	.	TG	T	13806.23	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=13.658;DP=561;FS=9.292;HRun=1;HaplotypeScore=124.8877;InbreedingCoeff=0.9755;MQ=81.35;MQ0=0;MQRankSum=-12.457;QD=34.86;ReadPosRankSum=-0.933;VQSLOD=3.1988;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,129,2005	1/1:0,7:7:21.07:293,21,0	0/0:29,0:29:70.23:0,70,1128	0/0:25,0:20:46.90:0,47,574	1/1:0,12:11:30.03:374,30,0	1/1:0,16:16:48.16:665,48,0	1/1:3,14:17:51.05:638,51,0	1/1:0,27:27:75.23:1014,75,0	1/1:0,24:24:69.23:943,69,0	1/1:0,17:17:51.16:695,51,0	1/1:0,3:3:8.99:103,9,0	0/0:33,0:33:99:0,99,1554	1/1:0,18:18:48.16:665,48,0	1/1:1,27:28:81.26:1114,81,0	1/1:3,16:19:51.14:677,51,0	1/1:1,29:30:83.87:1141,84,0	1/1:0,29:28:72.71:1005,73,0	1/1:0,18:18:45.13:610,45,0	1/1:1,13:13:35.61:467,36,0	1/1:0,16:16:45.01:560,45,0	1/1:0,23:23:42.14:586,42,0	0/0:21,0:21:60.20:0,60,957	1/1:0,16:16:30.06:394,30,0	1/1:0,25:25:42.29:581,42,0	0/0:13,0:13:39.12:0,39,600	1/1:0,20:20:54.15:694,54,0	1/1:0,13:13:33.11:461,33,0	1/1:0,4:4:9.03:126,9,0
chr10	13806325	.	A	AG	19768.95	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=4.769;DP=750;FS=4.297;HRun=4;HaplotypeScore=100.7026;InbreedingCoeff=0.9967;MQ=87.65;MQ0=1;MQRankSum=-5.890;QD=35.88;ReadPosRankSum=2.046;VQSLOD=4.7443;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,126,1395	1/1:0,12:12:36.12:492,36,0	0/0:42,0:42:93.14:0,93,1074	0/0:25,0:24:51.11:0,51,557	1/1:1,28:28:69.23:942,69,0	1/1:1,28:29:75.04:950,75,0	1/1:0,27:27:72.24:985,72,0	1/1:0,25:25:72.21:968,72,0	1/1:0,10:10:30.10:410,30,0	1/1:1,31:32:93.27:1250,93,0	1/1:0,16:16:42.14:574,42,0	0/0:39,0:39:99:0,111,1239	1/1:1,20:21:54.18:736,54,0	1/1:1,33:34:93.31:1271,93,0	1/1:1,30:31:81.27:1101,81,0	1/1:3,33:36:90.30:1231,90,0	1/1:1,26:27:69.23:944,69,0	1/1:2,17:19:51.17:698,51,0	1/1:1,22:23:63.20:835,63,0	1/1:1,28:29:69.19:921,69,0	1/1:2,38:40:99:1354,99,0	0/0:28,0:28:69.18:0,69,772	1/1:1,21:22:60.19:805,60,0	1/1:0,26:26:75.25:1026,75,0	0/0:18,0:18:48.12:0,48,535	1/1:0,32:32:96.29:1291,96,0	1/1:2,20:23:57.19:779,57,0	1/1:0,8:8:15.05:205,15,0
chr10	13806604	.	T	TA	25299.54	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-14.079;DP=751;FS=1.849;HRun=2;HaplotypeScore=71.4751;InbreedingCoeff=0.9993;MQ=79.05;MQ0=0;MQRankSum=-4.503;QD=43.40;ReadPosRankSum=2.156;VQSLOD=4.5255;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,147,2056	1/1:0,9:9:27.09:407,27,0	0/0:18,0:18:54.15:0,54,719	0/0:18,0:18:45.10:0,45,591	1/1:0,29:29:75.25:1117,75,0	1/1:2,18:20:54.18:863,54,0	1/1:1,33:34:87.30:1391,87,0	1/1:0,33:33:96.33:1510,96,0	1/1:1,34:35:90.27:1412,90,0	1/1:0,28:28:84.27:1319,84,0	1/1:0,34:34:81.27:1278,81,0	0/0:41,0:41:99:0,123,1681	1/1:0,34:34:96.33:1535,96,0	1/1:0,26:26:78.27:1247,78,0	1/1:1,37:38:98.93:1580,99,0	1/1:0,31:31:84.29:1343,84,0	1/1:1,25:26:66.23:1055,66,0	1/1:1,17:18:51.17:815,51,0	1/1:2,16:18:51.15:787,51,0	1/1:0,15:15:36.12:575,36,0	1/1:0,30:30:87.30:1391,87,0	0/0:19,0:19:51.17:0,51,706	1/1:0,22:21:60.20:959,60,0	1/1:0,32:32:87.30:1391,87,0	0/0:22,0:22:63.20:0,63,858	1/1:0,34:34:99:1605,102,0	1/1:0,28:29:84.29:1337,84,0	1/1:0,8:8:24.08:383,24,0
chr10	13807039	.	G	GC	234.79	PASS	AB=0.858;AC=10;AF=0.179;AN=56;BaseQRankSum=6.624;DP=432;FS=43.929;HRun=0;HaplotypeScore=46.4546;InbreedingCoeff=-0.2168;MQ=58.78;MQ0=13;MQRankSum=-6.465;QD=2.10;ReadPosRankSum=-1.557;VQSLOD=0.5010;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,1:27:18.44:0,18,804	0/0:2,1:2:6.02:0,6,84	0/1:11,0:9:5.35:5,0,168	0/0:7,0:5:13.29:0,13,170	0/1:10,1:11:17.39:17,0,345	0/0:17,0:17:51.17:0,51,713	0/0:9,0:9:24.08:0,24,335	0/0:18,0:17:48.15:0,48,642	0/1:8,3:10:71.28:71,0,227	0/0:15,1:15:44.97:0,45,545	0/0:18,0:18:45.11:0,45,607	0/1:5,2:7:77.32:77,0,133	0/1:5,3:5:32.63:33,0,153	0/0:14,0:14:42.12:0,42,569	0/1:16,2:18:47.12:47,0,539	0/1:15,1:16:8.55:9,0,464	0/0:30,1:30:60.16:0,60,800	0/0:19,0:18:51.17:0,51,711	0/0:22,1:22:15.30:0,15,790	0/0:15,1:15:39:0,39,479	0/0:8,2:8:15.05:0,15,210	0/1:3,1:4:38.65:39,0,75	0/1:9,2:10:23.44:23,0,249	0/0:17,0:17:48.16:0,48,670	0/0:17,0:16:45.15:0,45,629	0/0:20,2:20:15.52:0,16,775	0/0:32,1:32:91.26:0,91,1164	0/1:13,2:15:53.61:54,0,441
chr10	13807361	.	A	AT	8618.59	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-6.945;DP=396;FS=11.750;HRun=5;HaplotypeScore=38.1990;InbreedingCoeff=0.8385;MQ=60.05;MQ0=6;MQRankSum=-1.005;QD=29.82;ReadPosRankSum=-0.071;VQSLOD=3.9231;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,114,1208	1/1:1,2:3:3.01:39,3,0	0/0:21,0:7:14.84:0,15,158	0/0:17,0:9:14.81:0,15,161	1/1:2,17:19:39.08:482,39,0	1/1:0,18:18:48.16:631,48,0	1/1:0,11:11:27.09:355,27,0	1/1:7,28:33:78.25:1023,78,0	1/1:4,6:10:15.05:189,15,0	1/1:1,11:12:33.11:428,33,0	1/1:4,14:18:39.13:508,39,0	0/0:9,0:9:27.07:0,27,290	1/1:0,5:5:9.03:117,9,0	1/1:0,3:3:6.02:79,6,0	1/1:2,6:8:18.06:236,18,0	1/1:2,7:9:18.06:236,18,0	1/1:3,30:33:76.36:964,76,0	1/1:0,25:24:66.21:868,66,0	1/1:0,11:10:21.07:276,21,0	1/1:0,10:10:21.07:268,21,0	1/1:1,2:3:3.01:39,3,0	0/0:2,0:2:6.02:0,6,64	1/1:2,5:7:5.17:206,5,0	1/1:0,6:6:12.04:157,12,0	0/0:13,0:12:33.08:0,33,353	1/1:2,19:21:57.19:747,57,0	1/1:1,13:14:36.08:454,36,0	1/1:0,8:8:24.08:316,24,0
chr10	13808662	.	AG	A	6150.94	PASS	AB=1.000;AC=43;AF=0.768;AN=56;BaseQRankSum=6.997;DP=485;FS=26.627;HRun=13;HaplotypeScore=91.6500;InbreedingCoeff=0.6838;MQ=74.92;MQ0=1;MQRankSum=0.442;QD=15.81;ReadPosRankSum=5.086;VQSLOD=4.0570;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:24.85:0,25,191	1/1:1,8:8:20.88:153,21,0	0/1:14,0:13:1.21:1,0,7	0/0:17,0:15:3.24:0,3,144	1/1:2,18:20:47.68:350,48,0	0/0:20,0:20:30.50:0,30,239	0/0:25,0:25:51.53:0,52,265	1/1:8,13:21:33.74:238,34,0	1/1:1,13:14:32.81:240,33,0	1/1:4,7:11:17.76:131,18,0	1/1:1,13:14:35.77:262,36,0	0/0:12,0:12:6:0,6,53	1/1:3,12:15:32.73:240,33,0	1/1:1,8:9:23.86:175,24,0	1/1:4,18:21:50.59:371,51,0	1/1:3,17:20:50.63:372,51,0	1/1:2,32:34:89.38:656,89,0	1/1:3,20:23:59.58:433,60,0	1/1:4,20:24:59.58:437,60,0	1/1:6,9:15:23.79:175,24,0	1/1:5,16:21:47.62:350,48,0	0/1:9,0:9:13.84:14,0,18	1/1:2,16:18:50.71:371,51,0	1/1:2,25:27:65.59:481,66,0	0/1:7,0:7:12.71:13,0,41	1/1:7,17:23:47.29:340,47,0	1/1:1,14:15:41.72:305,42,0	1/1:0,3:3:5.97:44,6,0
chr10	13814298	.	T	TTTTTTTTG	23111.59	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-4.508;DP=689;FS=4.893;HRun=0;HaplotypeScore=162.1243;InbreedingCoeff=0.9738;MQ=61.97;MQ0=2;MQRankSum=-7.497;QD=43.36;ReadPosRankSum=-0.936;VQSLOD=4.3587;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,116,2159	1/1:4,3:8:11.87:248,12,0	0/0:21,0:14:22.68:0,23,180	0/0:15,0:14:29.09:0,29,342	1/1:12,20:38:48.01:1231,48,0	1/1:6,14:23:33.11:1099,33,0	1/1:9,8:19:18.03:554,18,0	1/1:10,31:45:99:2430,114,0	1/1:19,1:20:18.48:446,18,0	1/1:5,15:21:53.73:1286,54,0	1/1:2,15:20:29.99:788,30,0	0/0:27,0:27:50.20:0,50,1086	1/1:5,15:22:21.07:757,21,0	1/1:5,15:21:33.10:1094,33,0	1/1:15,15:29:52.93:1781,53,0	1/1:7,12:19:21.03:690,21,0	1/1:9,17:28:22.48:631,22,0	1/1:8,17:26:18.01:546,18,0	1/1:6,21:30:78.14:1899,78,0	1/1:7,18:25:47.95:1289,48,0	1/1:13,1:14:33.09:702,33,0	0/0:27,0:26:39.74:0,40,945	1/1:6,14:20:27.06:750,27,0	1/1:10,18:29:33.58:1001,34,0	0/0:20,0:20:42.88:0,43,818	1/1:12,16:33:53.16:1886,53,0	1/1:11,21:34:47.99:1644,48,0	1/1:1,5:6:9.03:361,9,0
chr10	13814299	.	T	TTTTTTTG	17681.07	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=2.897;DP=685;FS=3.322;HRun=0;HaplotypeScore=172.4642;InbreedingCoeff=0.9311;MQ=61.73;MQ0=2;MQRankSum=-8.088;QD=33.55;ReadPosRankSum=0.775;VQSLOD=4.7241;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,123,2077	1/1:8,0:8:10.42:183,10,0	0/0:20,0:14:22.31:0,22,209	0/0:16,0:14:29.07:0,29,347	1/1:38,0:38:1.76:758,2,0	1/1:23,1:24:36.12:1001,36,0	1/1:18,0:18:18.04:479,18,0	1/1:44,0:44:75:1830,75,0	1/1:20,0:20:18.01:344,18,0	1/1:20,0:20:50.71:961,51,0	1/1:19,0:19:29.83:626,30,0	0/0:27,0:27:67.95:0,68,1116	1/1:21,1:22:20.60:627,21,0	1/1:18,1:19:33.11:891,33,0	1/1:29,1:29:51.09:1350,51,0	1/1:18,0:18:21.01:510,21,0	1/1:29,0:29:19.58:530,20,0	1/1:27,0:27:20.88:435,21,0	1/1:29,0:29:42.45:1276,42,0	1/1:27,0:26:49.36:1003,49,0	1/1:11,1:12:32.81:520,33,0	0/0:28,0:27:43.60:0,44,952	1/1:19,0:19:27.05:586,27,0	1/1:31,0:30:36.11:777,36,0	0/0:20,0:20:46.08:0,46,806	1/1:34,0:34:27.38:1404,27,0	1/1:33,0:33:47.42:1318,47,0	1/1:6,0:6:9.03:270,9,0
chr10	13821173	.	C	CAA	1264.90	PASS	AB=1.000;AC=39;AF=0.696;AN=56;BaseQRankSum=2.208;DP=387;FS=6.846;HRun=13;HaplotypeScore=98.6350;InbreedingCoeff=0.3661;MQ=35.19;MQ0=14;MQRankSum=-3.823;QD=4.22;ReadPosRankSum=3.689;VQSLOD=-0.3594;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:26:46.97:0,47,393	0/1:6,0:4:2.35:6,0,2	0/1:4,0:1:0:0,0,0	0/0:8,0:3:5.56:0,6,29	1/1:17,0:16:9.83:72,10,0	1/1:12,0:11:11.18:69,11,0	0/1:7,0:7:1.56:46,0,2	1/1:17,0:17:8.89:153,9,0	1/1:13,0:12:4.53:39,5,0	1/1:20,0:18:7.07:65,7,0	1/1:18,1:20:7.39:106,7,0	0/0:13,0:14:11.48:0,11,88	0/1:13,0:12:2.80:4,0,3	1/1:7,1:8:4.66:20,5,0	1/1:17,0:17:18.98:176,19,0	1/1:12,0:11:2.81:41,3,0	1/1:18,2:16:1.66:94,2,0	1/1:10,0:7:11.44:90,11,0	1/1:14,1:16:13.51:146,14,0	0/1:12,0:12:15.07:27,0,15	1/1:7,1:5:0.53:34,1,0	0/0:10,0:10:5.90:0,6,52	0/1:13,0:12:2.71:45,0,3	1/1:10,0:7:2.30:8,2,0	0/0:25,0:25:37.19:0,37,296	0/1:13,0:13:1.63:70,0,2	1/1:14,0:14:13.96:97,14,0	1/1:17,0:14:2.36:10,2,0
chr10	13821182	.	AAAAAC	A	5652.55	PASS	AB=0.976;AC=42;AF=0.750;AN=56;BaseQRankSum=6.663;DP=444;FS=15.307;HRun=0;HaplotypeScore=115.4349;InbreedingCoeff=0.7137;MQ=35.98;MQ0=24;MQRankSum=-2.818;QD=16.67;ReadPosRankSum=1.044;VQSLOD=3.7373;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:24:49.91:0,50,1274	1/1:7,0:4:11.62:104,12,0	0/0:8,0:1:3.01:0,3,63	0/0:22,0:3:5.83:0,6,63	1/1:15,1:15:28.35:255,28,0	1/1:16,0:15:42.05:420,42,0	1/1:7,0:7:17.76:145,18,0	1/1:23,1:24:43.53:365,44,0	1/1:15,0:14:31.94:284,32,0	1/1:21,2:20:10.47:351,10,0	1/1:18,0:18:43.54:378,44,0	0/0:14,0:14:21.81:0,22,339	1/1:12,0:11:7.74:149,8,0	0/1:13,0:12:43.31:61,0,43	1/1:18,1:19:41.84:375,42,0	1/1:14,1:14:28.14:232,28,0	0/1:19,1:15:4.87:252,0,5	1/1:10,0:7:13.27:129,13,0	1/1:16,2:17:34.30:432,34,0	1/1:11,0:9:19.08:143,19,0	1/1:9,0:6:15.02:152,15,0	0/0:7,0:7:11.92:0,12,237	1/1:17,0:16:37.71:324,38,0	1/1:8,1:6:6.20:61,6,0	0/0:27,0:26:66.23:0,66,1095	1/1:22,0:21:44.91:473,45,0	1/1:23,0:22:54.79:430,55,0	1/1:15,0:12:17.60:135,18,0
chr10	13821183	.	AAAAC	A	7783.43	PASS	AB=0.933;AC=43;AF=0.768;AN=56;BaseQRankSum=5.978;DP=449;FS=13.198;HRun=0;HaplotypeScore=103.7871;InbreedingCoeff=0.8116;MQ=36.30;MQ0=24;MQRankSum=-3.369;QD=22.76;ReadPosRankSum=0.034;VQSLOD=3.6729;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:24:48.11:0,48,1038	1/1:4,3:4:11.53:154,12,0	0/0:8,0:1:3.01:0,3,52	0/0:23,0:3:5.83:0,6,74	1/1:10,7:16:35.63:380,36,0	1/1:7,9:15:42.10:557,42,0	1/1:5,2:7:17.99:214,18,0	1/1:20,4:24:47.15:478,47,0	1/1:11,4:14:33.02:395,33,0	1/1:20,4:21:26.64:412,27,0	1/1:11,6:17:44.15:575,44,0	0/0:14,0:14:21.75:0,22,283	1/1:12,0:11:24.38:258,24,0	0/1:13,1:13:7.62:148,0,8	1/1:15,4:19:41.98:468,42,0	1/1:13,3:15:29.51:313,30,0	1/1:14,6:15:15.54:406,16,0	1/1:8,3:8:17.89:181,18,0	1/1:13,5:17:29.19:500,29,0	1/1:7,4:9:20.94:226,21,0	1/1:6,3:6:15.03:209,15,0	0/0:8,0:8:9.14:0,9,200	1/1:11,6:16:38.90:420,39,0	1/1:6,3:6:8.07:92,8,0	0/0:27,0:26:62.95:0,63,926	1/1:16,6:21:54.15:591,54,0	1/1:19,5:23:63.28:640,63,0	1/1:11,2:10:17.83:169,18,0
chr10	13821184	.	AAAC	A	6993.99	PASS	AB=1.000;AC=45;AF=0.804;AN=56;BaseQRankSum=6.783;DP=455;FS=7.039;HRun=0;HaplotypeScore=102.6059;InbreedingCoeff=0.8141;MQ=36.76;MQ0=25;MQRankSum=-3.715;QD=19.65;ReadPosRankSum=-1.288;VQSLOD=3.6559;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:24:41.63:0,42,803	1/1:7,0:4:11.77:117,12,0	0/1:10,0:2:13.99:14,0,36	0/0:23,0:3:5.82:0,6,70	1/1:17,0:16:35.71:327,36,0	1/1:16,0:15:42.06:437,42,0	1/1:6,1:7:17.99:192,18,0	1/1:22,1:23:48.07:429,48,0	1/1:13,2:14:36.79:349,37,0	1/1:23,1:21:43.45:412,43,0	1/1:15,2:17:45.54:484,46,0	0/0:14,0:14:20.62:0,21,215	1/1:9,3:11:26.83:239,27,0	1/1:14,0:13:12.25:159,12,0	1/1:19,1:20:44.81:418,45,0	1/1:15,2:16:34.84:342,35,0	1/1:19,2:16:14.52:366,15,0	1/1:10,0:8:17.82:150,18,0	1/1:17,2:17:28.93:411,29,0	1/1:10,1:9:20.95:217,21,0	1/1:9,0:6:15.03:175,15,0	0/0:8,0:8:9.14:0,9,164	1/1:16,2:17:41.77:388,42,0	1/1:9,0:6:8.56:80,9,0	0/0:27,0:26:50.12:0,50,749	1/1:22,2:23:62.04:553,62,0	1/1:23,1:23:62.61:576,63,0	1/1:12,0:9:17.89:159,18,0
chr10	13821185	.	AAC	A	6263.87	PASS	AB=1.000;AC=45;AF=0.804;AN=56;BaseQRankSum=7.587;DP=456;FS=5.261;HRun=0;HaplotypeScore=98.2244;InbreedingCoeff=0.8208;MQ=36.68;MQ0=26;MQRankSum=-3.927;QD=17.55;ReadPosRankSum=-1.688;VQSLOD=3.8937;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:24:34.38:0,34,593	1/1:7,0:4:11.92:102,12,0	0/1:10,0:2:13.99:14,0,26	0/0:24,0:4:5.67:0,6,53	1/1:16,1:16:34.69:299,35,0	1/1:14,2:15:41.95:382,42,0	1/1:7,0:7:17.97:160,18,0	1/1:21,2:23:50.22:399,50,0	1/1:15,0:14:36.76:309,37,0	1/1:21,2:20:49.56:395,50,0	1/1:16,1:17:44.41:398,44,0	0/0:14,0:14:18.93:0,19,156	1/1:11,1:11:26.86:218,27,0	1/1:13,1:13:22.55:196,23,0	1/1:16,4:20:44.74:367,45,0	1/1:14,3:16:35.80:312,36,0	1/1:20,1:16:30.64:308,31,0	1/1:9,1:8:16.93:126,17,0	1/1:19,0:17:32.13:350,32,0	1/1:10,1:9:20.93:181,21,0	1/1:8,2:6:15.02:146,15,0	0/0:7,0:7:9.23:0,9,129	1/1:17,1:17:41.76:349,42,0	1/1:8,1:6:9.90:78,10,0	0/0:27,0:26:15.08:0,15,560	1/1:19,5:23:62.28:522,62,0	1/1:24,1:23:62.74:510,63,0	1/1:12,0:9:17.91:144,18,0
chr10	13821186	.	AC	A	5608.32	PASS	AB=0.857;AC=45;AF=0.804;AN=56;BaseQRankSum=8.047;DP=449;FS=4.555;HRun=1;HaplotypeScore=93.3914;InbreedingCoeff=0.8058;MQ=38.63;MQ0=26;MQRankSum=-4.052;QD=16.02;ReadPosRankSum=-2.069;VQSLOD=4.3083;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:23:25.37:0,25,402	1/1:7,0:4:11.77:86,12,0	0/1:10,2:3:15.90:16,0,19	0/0:20,5:4:5.62:0,6,43	1/1:16,1:16:34.58:269,35,0	1/1:15,1:15:41.62:325,42,0	1/1:7,0:7:17.91:139,18,0	1/1:22,0:22:52.62:371,53,0	1/1:14,1:14:36.65:269,37,0	1/1:20,1:18:50.51:390,51,0	1/1:15,2:17:45.12:340,45,0	0/0:14,0:14:9.01:0,9,99	1/1:11,0:10:26.80:197,27,0	1/1:14,0:13:29.46:203,29,0	1/1:18,2:20:44.65:337,45,0	1/1:16,0:15:35.65:277,36,0	1/1:20,1:16:37.27:260,37,0	1/1:8,1:7:14.54:102,15,0	1/1:19,0:17:33.88:311,34,0	1/1:10,1:9:20.86:160,21,0	1/1:10,0:6:14.96:120,15,0	0/0:7,0:7:9.10:0,9,96	1/1:17,1:17:41.67:314,42,0	1/1:8,1:6:9.24:69,9,0	0/0:26,1:26:17.57:0,18,430	1/1:22,0:21:61.70:455,62,0	1/1:24,1:23:62.66:463,63,0	1/1:10,1:8:17.90:137,18,0
chr10	13821214	.	C	CA	7953.14	PASS	AB=0.891;AC=45;AF=0.804;AN=56;BaseQRankSum=1.617;DP=538;FS=3.860;HRun=9;HaplotypeScore=104.6856;InbreedingCoeff=0.6254;MQ=60.04;MQ0=18;MQRankSum=-1.518;QD=16.99;ReadPosRankSum=0.524;VQSLOD=4.6360;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:27:62.57:0,63,517	1/1:7,2:7:9.02:100,9,0	0/1:40,0:18:9.96:10,0,100	0/1:47,0:16:33.40:33,0,49	1/1:5,15:18:42.11:464,42,0	1/1:1,17:18:47.96:512,48,0	1/1:3,5:8:15.04:166,15,0	1/1:10,17:26:41.89:435,42,0	1/1:2,12:14:38.84:409,39,0	1/1:7,22:27:69.19:761,69,0	1/1:7,13:20:24.76:442,25,0	0/0:10,0:10:17.99:0,18,156	1/1:5,12:17:7.03:306,7,0	1/1:4,7:11:24.02:252,24,0	1/1:3,14:17:33.07:353,33,0	1/1:4,9:14:29.91:313,30,0	1/1:10,12:18:32.65:326,33,0	1/1:4,11:14:24.06:265,24,0	0/1:10,8:15:21.73:235,0,22	1/1:7,8:13:29.65:294,30,0	1/1:4,6:8:9.02:100,9,0	0/0:9,0:9:23.98:0,24,208	1/1:5,15:19:45.02:481,45,0	1/1:2,4:6:12.03:132,12,0	0/0:23,0:23:55.49:0,55,468	1/1:8,21:27:63.07:646,63,0	1/1:6,25:29:69.19:763,69,0	1/1:4,4:8:15.02:155,15,0
chr10	13837432	.	C	CGTGTGT	2858.10	PASS	AB=1.000;AC=39;AF=0.696;AN=56;BaseQRankSum=5.580;DP=432;FS=8.191;HRun=0;HaplotypeScore=138.2059;InbreedingCoeff=0.5643;MQ=57.59;MQ0=8;MQRankSum=-5.642;QD=9.19;ReadPosRankSum=-3.952;VQSLOD=0.8287;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:60.11:0,60,1086	1/1:6,0:6:6.94:80,7,0	0/0:30,0:14:31.37:0,31,558	0/0:15,0:11:30.09:0,30,545	1/1:23,0:21:6.16:49,6,0	0/1:21,0:20:25.91:26,0,211	0/1:17,0:17:74.90:75,0,155	1/1:30,0:28:26.73:242,27,0	1/1:8,0:8:2.84:78,3,0	1/1:8,0:6:5.65:109,6,0	0/0:11,6:19:0.91:0,1,3	0/0:7,0:7:12.04:0,12,257	1/1:8,0:6:7.21:76,7,0	0/1:8,0:8:0.01:0,0,0	1/1:10,0:10:17.96:201,18,0	1/1:12,0:12:13.71:221,14,0	1/1:24,0:24:16.26:237,16,0	1/1:7,0:7:5.48:93,5,0	1/1:21,0:20:24.23:274,24,0	1/1:20,0:19:14.99:147,15,0	1/1:18,0:17:0.36:54,0,0	0/0:13,0:12:30.10:0,30,660	1/1:13,0:13:4.87:46,5,0	1/1:6,0:6:2.98:21,3,0	0/0:13,0:13:36.10:0,36,710	1/1:18,1:19:35.07:618,35,0	1/1:10,11:22:5.95:141,6,0	1/1:10,0:9:14.97:251,15,0
chr10	13837464	.	T	TGTGTGTGTGTGTGTGC	7373.27	PASS	AB=1.000;AC=43;AF=0.796;AN=54;BaseQRankSum=3.159;DP=364;FS=3.709;HRun=0;HaplotypeScore=161.7453;InbreedingCoeff=0.7040;MQ=50.13;MQ0=11;MQRankSum=-3.905;QD=25.08;ReadPosRankSum=-3.054;VQSLOD=3.5746;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:68.81:0,69,1476	1/1:4,0:4:11.87:358,12,0	0/0:6,0:3:2.99:0,3,23	./.	1/1:22,0:19:15.82:117,16,0	1/1:17,0:16:12.87:194,13,0	1/1:19,0:19:40.91:720,41,0	1/1:16,0:13:15:195,15,0	1/1:5,0:6:9.02:184,9,0	1/1:10,1:9:26.79:529,27,0	1/1:11,0:11:4.32:23,4,0	0/0:6,0:6:15.04:0,15,463	1/1:4,0:2:3.35:16,3,0	1/1:12,0:12:15.17:101,15,0	1/1:10,0:10:19.80:301,20,0	1/1:12,0:12:15.50:271,15,0	1/1:28,0:28:61.07:1148,61,0	1/1:2,9:12:9.50:561,10,0	1/1:19,0:15:43.38:944,43,0	1/1:18,0:17:9:147,9,0	1/1:17,0:14:11.53:84,12,0	0/0:19,0:18:45.08:0,45,1329	0/1:10,0:10:12.34:37,0,12	1/1:7,0:7:5.98:46,6,0	0/0:14,0:13:39.05:0,39,898	1/1:16,0:16:40.31:633,40,0	1/1:13,0:13:26.93:590,27,0	1/1:10,0:9:12.04:174,12,0
chr10	13844709	.	C	CT	699.26	PASS	AB=0.977;AC=28;AF=0.500;AN=56;BaseQRankSum=-1.575;DP=509;FS=0.556;HRun=16;HaplotypeScore=116.1437;InbreedingCoeff=-0.4653;MQ=61.95;MQ0=3;MQRankSum=-0.767;QD=1.53;ReadPosRankSum=-2.784;VQSLOD=-0.4718;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:28,3:33:27.42:27,0,155	0/1:7,0:7:2.01:2,0,26	0/1:23,0:13:21.09:23,0,21	0/1:17,0:13:10.93:11,0,27	0/1:19,0:19:24.36:24,0,50	0/1:18,0:18:11.18:11,0,17	0/1:26,0:26:0.27:15,0,0	0/1:30,0:29:10.26:91,0,10	0/1:8,1:9:7:13,0,7	1/1:26,0:26:12.11:103,12,0	0/1:16,0:16:12.98:59,0,13	0/1:14,0:15:2.43:2,0,4	0/1:12,0:11:8.21:8,0,16	1/1:17,0:17:7.15:45,7,0	0/0:22,0:22:8.19:0,8,32	0/1:10,0:10:7.21:18,0,7	0/1:26,1:27:8.09:39,0,8	0/1:25,0:25:19.27:19,0,21	0/1:19,0:17:9.12:34,0,9	0/1:18,2:20:35.51:72,0,36	1/1:13,1:14:11.70:54,12,0	0/1:15,1:17:46.11:46,0,50	0/1:10,1:10:11.91:35,0,12	0/0:15,0:15:2.67:0,3,10	0/0:12,1:14:1.33:0,1,96	0/1:19,1:19:15.85:17,0,16	0/1:18,0:17:10.58:48,0,11	0/1:9,0:9:14.89:28,0,15
chr10	13844724	.	TTG	T	2632.10	PASS	AB=0.981;AC=34;AF=0.607;AN=56;BaseQRankSum=-3.418;DP=483;FS=3.052;HRun=0;HaplotypeScore=92.0425;InbreedingCoeff=-0.1777;MQ=53.04;MQ0=8;MQRankSum=-0.587;QD=6.25;ReadPosRankSum=-6.400;VQSLOD=1.0802;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:42.19:0,42,619	0/1:7,1:8:25.59:40,0,26	0/1:18,0:11:27.47:27,0,33	0/1:11,0:8:19.40:21,0,19	0/1:22,0:22:15.28:130,0,15	1/1:15,3:18:18.05:293,18,0	1/1:19,4:23:44.74:344,45,0	0/1:19,0:18:16.82:93,0,17	1/1:9,0:9:5.59:70,6,0	1/1:22,0:21:5.02:206,5,0	1/1:19,0:18:22.51:180,23,0	0/0:12,0:12:13.57:0,14,150	0/1:10,0:9:2.44:39,0,2	0/1:18,0:18:24.19:99,0,24	0/1:15,1:16:32.08:39,0,32	0/1:15,0:15:23.78:103,0,24	1/1:25,1:26:2.30:116,2,0	0/1:27,0:27:15.39:89,0,15	0/1:17,0:14:13.38:107,0,13	0/1:16,3:19:3.73:158,0,4	1/1:11,0:11:21.64:146,22,0	0/1:16,0:16:6.23:6,0,252	0/1:16,0:15:4.11:104,0,4	1/1:11,0:11:9.10:49,9,0	0/0:16,0:16:44.45:0,44,441	1/1:25,0:22:14.39:183,14,0	0/1:15,0:14:23.02:119,0,23	0/1:10,0:10:27.14:39,0,27
chr10	13855661	.	G	GAAA	15248.39	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-6.595;DP=631;FS=13.118;HRun=10;HaplotypeScore=97.3768;InbreedingCoeff=0.9123;MQ=70.05;MQ0=7;MQRankSum=-2.209;QD=33.81;ReadPosRankSum=-0.706;VQSLOD=2.6012;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,132,1593	1/1:2,2:4:6.02:115,6,0	0/0:38,0:18:21.27:0,21,192	0/0:42,0:24:0.30:0,0,194	1/1:6,18:23:54.11:902,54,0	1/1:3,18:22:45.13:811,45,0	1/1:5,13:17:29.59:629,30,0	1/1:9,11:22:48.13:840,48,0	1/1:2,11:14:27.09:504,27,0	1/1:12,17:30:54.15:939,54,0	1/1:5,5:11:18.06:325,18,0	0/0:12,0:13:36.01:0,36,419	1/1:7,5:15:24.07:406,24,0	1/1:6,16:22:45.12:824,45,0	1/1:5,15:21:43.36:754,43,0	1/1:9,10:21:35.92:683,36,0	1/1:4,31:38:78.25:1462,78,0	1/1:4,20:26:63.22:1192,63,0	1/1:13,10:27:54.10:842,54,0	1/1:8,11:22:36.09:619,36,0	1/1:6,5:12:15.03:254,15,0	0/0:15,0:15:36.08:0,36,426	1/1:3,5:11:12.04:191,12,0	1/1:2,19:23:54.19:1038,54,0	0/0:16,0:18:47.96:0,48,539	1/1:9,14:29:66.04:992,66,0	1/1:4,9:17:36.37:593,36,0	1/1:5,6:12:18.06:331,18,0
chr10	13867560	.	TACACAC	T	3412.67	PASS	AB=0.749;AC=36;AF=0.720;AN=50;BaseQRankSum=7.996;DP=698;FS=2.292;HRun=0;HaplotypeScore=171.5222;InbreedingCoeff=0.3480;MQ=59.71;MQ0=18;MQRankSum=-6.649;QD=6.51;ReadPosRankSum=-0.176;VQSLOD=2.3458;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:33:32.99:0,33,858	1/1:6,3:9:5.80:77,6,0	./.	./.	1/1:10,3:16:2.74:55,3,0	1/1:13,6:19:2.25:60,2,0	0/1:21,3:25:13.97:108,0,14	1/1:21,0:29:11.95:104,12,0	1/1:19,10:31:7.99:162,8,0	0/1:21,7:28:19.83:252,0,20	0/1:14,7:19:3.78:55,0,4	0/0:32,0:33:28.09:0,28,817	1/1:7,11:18:21.96:390,22,0	1/1:27,10:38:17.86:329,18,0	1/1:20,7:29:6.49:104,6,0	1/1:12,16:28:14.89:304,15,0	0/1:20,16:37:40:115,0,40	0/1:11,10:21:31.71:165,0,32	1/1:11,4:15:14.52:214,15,0	./.	1/1:52,0:53:3.01:56,3,0	0/0:27,0:28:32.67:0,33,653	0/1:9,5:14:0:0,0,0	1/1:29,5:36:14.58:294,15,0	0/0:15,0:15:33.01:0,33,692	1/1:15,3:19:10.59:167,11,0	1/1:10,2:16:15.05:274,15,0	1/1:8,4:12:7.58:125,8,0
chr10	13874540	.	AACACACACACACAC	A	2536.75	PASS	AB=0.808;AC=33;AF=0.688;AN=48;BaseQRankSum=5.103;DP=656;FS=0.963;HRun=0;HaplotypeScore=215.2034;InbreedingCoeff=0.4946;MQ=63.02;MQ0=31;MQRankSum=-3.584;QD=6.54;ReadPosRankSum=-0.785;VQSLOD=2.6739;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:27:18.06:0,18,733	1/1:9,3:12:6.02:152,6,0	./.	./.	1/1:12,3:15:7.57:102,8,0	1/1:14,0:21:3.01:43,3,0	0/0:29,0:28:2.99:0,3,23	0/0:24,0:24:0:0,0,0	1/1:22,4:25:6.01:225,6,0	1/1:16,0:16:3:40,3,0	1/1:12,5:16:5.62:104,6,0	0/0:21,0:25:24.08:0,24,943	1/1:23,6:27:6.02:228,6,0	0/0:19,0:16:1.25:0,1,3	1/1:30,10:40:12.03:400,12,0	1/1:20,5:26:6.01:206,6,0	1/1:19,4:20:2.36:104,2,0	1/1:13,7:19:6:140,6,0	1/1:18,0:19:2.59:131,3,0	0/1:16,0:19:59.35:99,0,59	1/1:40,0:40:12.02:167,12,0	0/0:8,0:10:21.07:0,21,711	./.	./.	0/0:11,0:13:24.08:0,24,926	1/1:19,4:22:10.71:94,11,0	1/1:13,6:18:9.02:341,9,0	1/1:13,3:16:3.01:114,3,0
chr10	13885736	.	C	CACTCCGAAGAGGCAGCTCCCCT	79198.96	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=2.995;DP=653;FS=5.435;HRun=0;HaplotypeScore=349.6766;InbreedingCoeff=0.9896;MQ=69.18;MQ0=0;MQRankSum=-16.544;QD=161.96;ReadPosRankSum=-2.468;VQSLOD=3.6764;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,132,7337	1/1:4,1:7:12.04:664,12,0	0/0:21,0:21:57.19:0,57,2554	0/0:29,0:29:65.27:0,65,2736	1/1:19,0:19:22:459,22,0	1/1:22,3:25:66.09:3791,66,0	1/1:29,2:31:84.22:5658,84,0	1/1:33,0:33:87.27:4515,87,0	1/1:18,5:24:69.24:6117,69,0	1/1:19,2:26:69.24:4134,69,0	1/1:6,0:6:15.52:591,16,0	0/0:25,0:25:66.23:0,66,3791	1/1:16,9:27:66.70:5622,67,0	1/1:23,6:33:84.29:6829,84,0	1/1:21,6:29:81.28:6338,81,0	1/1:12,3:19:42.14:3776,42,0	1/1:18,3:24:48.16:4072,48,0	1/1:15,4:24:51.12:4139,51,0	1/1:13,0:13:27.09:1099,27,0	1/1:11,1:13:27.56:1380,28,0	1/1:23,0:23:27.88:856,28,0	0/0:22,0:22:60.20:0,60,3328	1/1:14,1:20:33.18:1155,33,0	1/1:14,6:22:45.15:4194,45,0	0/0:20,0:20:57.20:0,57,3256	1/1:22,6:32:84.74:5897,85,0	1/1:22,6:28:69.23:5337,69,0	1/1:11,0:11:33.11:2576,33,0
chr10	13886529	.	G	GGTGTGTGT	6088.14	PASS	AB=1.000;AC=37;AF=0.740;AN=50;BaseQRankSum=-2.818;DP=675;FS=4.987;HRun=0;HaplotypeScore=188.1315;InbreedingCoeff=0.6904;MQ=49.86;MQ0=22;MQRankSum=-3.912;QD=13.26;ReadPosRankSum=-2.900;VQSLOD=3.3201;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:20.88:0,21,359	1/1:13,0:14:15.04:266,15,0	./.	./.	1/1:20,0:26:9.03:224,9,0	1/1:19,1:26:9.03:325,9,0	1/1:18,0:23:2.98:71,3,0	1/1:30,0:29:30.53:440,31,0	0/0:16,0:23:24.08:0,24,424	1/1:26,1:33:39.07:721,39,0	./.	0/0:18,0:18:18.06:0,18,388	1/1:15,0:16:3.01:49,3,0	1/1:14,2:21:33.06:819,33,0	1/1:23,5:33:3.48:124,3,0	1/1:19,4:27:24.08:664,24,0	1/1:24,2:35:18.06:520,18,0	1/1:19,0:19:9.03:231,9,0	1/1:17,0:17:3.01:71,3,0	1/1:12,0:15:15.05:329,15,0	0/1:27,0:25:0.57:20,0,1	0/0:27,0:27:17.99:0,18,351	1/1:11,1:14:3.01:119,3,0	1/1:17,2:22:12.04:371,12,0	0/0:15,0:17:21.07:0,21,495	1/1:25,0:29:17.08:344,17,0	1/1:19,1:23:16.87:381,17,0	0/0:4,0:4:0:0,0,0
chr10	13888845	.	C	CA	21163.99	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-15.579;DP=685;FS=8.447;HRun=1;HaplotypeScore=63.5985;InbreedingCoeff=0.9995;MQ=67.52;MQ0=0;MQRankSum=-4.191;QD=41.74;ReadPosRankSum=2.942;VQSLOD=5.2283;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,132,1711	1/1:0,15:15:42.14:630,42,0	0/0:34,0:34:90.21:0,90,1102	0/0:30,0:29:81.23:0,81,988	1/1:1,25:26:75.25:1121,75,0	1/1:0,36:36:99:1529,102,0	1/1:1,25:26:75.25:1124,75,0	1/1:2,32:34:96.33:1438,96,0	1/1:0,23:23:63.21:943,63,0	1/1:1,18:19:54.16:787,54,0	1/1:1,12:13:36.12:539,36,0	0/0:24,0:24:63.19:0,63,803	1/1:2,28:30:75.25:1122,75,0	1/1:1,23:24:69.23:1034,69,0	1/1:0,23:23:57.19:854,57,0	1/1:0,30:30:84.28:1259,84,0	1/1:0,30:30:78.26:1169,78,0	1/1:0,17:17:45.15:674,45,0	1/1:0,18:18:54.17:781,54,0	1/1:0,30:30:90.30:1349,90,0	1/1:0,24:24:72.24:1079,72,0	0/0:19,0:19:57.19:0,57,740	1/1:0,13:13:36.09:516,36,0	1/1:0,21:21:57.19:854,57,0	0/0:24,0:24:69.21:0,69,882	1/1:1,25:26:75.23:1102,75,0	1/1:0,21:21:60.20:899,60,0	1/1:0,8:8:24.08:360,24,0
chr10	13889182	.	CA	C	14510.15	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=7.619;DP=730;FS=0.694;HRun=7;HaplotypeScore=76.0126;InbreedingCoeff=0.9995;MQ=80.65;MQ0=0;MQRankSum=-4.600;QD=26.05;ReadPosRankSum=3.029;VQSLOD=5.5488;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,141,1742	1/1:1,18:19:51.12:520,51,0	0/0:16,0:16:36.11:0,36,433	0/0:26,0:26:48.95:0,49,572	1/1:2,15:17:45.10:459,45,0	1/1:0,15:15:33.07:337,33,0	1/1:2,25:27:60.11:603,60,0	1/1:4,25:29:72.15:729,72,0	1/1:3,27:30:72.16:735,72,0	1/1:3,23:26:66.15:673,66,0	1/1:4,15:19:45.10:455,45,0	0/0:31,0:31:87.26:0,87,1069	1/1:1,31:32:90.20:918,90,0	1/1:1,26:27:72.16:735,72,0	1/1:0,35:35:87.20:888,87,0	1/1:1,24:25:66.15:673,66,0	1/1:3,40:43:99:1119,111,0	1/1:3,29:32:81.18:826,81,0	1/1:2,15:17:45.07:451,45,0	1/1:0,28:28:81.10:802,81,0	1/1:2,31:33:81.18:826,81,0	0/0:19,0:19:57.17:0,57,704	1/1:3,20:23:51.11:520,51,0	1/1:1,19:20:54.12:551,54,0	0/0:29,0:29:87.27:0,87,1083	1/1:0,21:21:63.08:620,63,0	1/1:4,27:31:81.18:826,81,0	1/1:0,8:8:24.05:245,24,0
chr10	13891052	.	T	TTC	1138.85	PASS	AB=1.000;AC=30;AF=0.556;AN=54;BaseQRankSum=-1.262;DP=587;FS=24.410;HRun=0;HaplotypeScore=110.6820;InbreedingCoeff=-0.1383;MQ=62.14;MQ0=10;MQRankSum=0.268;QD=2.25;ReadPosRankSum=-3.381;VQSLOD=-0.1594;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:26:23.49:23,0,74	0/1:8,0:8:24.36:40,0,24	./.	0/1:24,0:16:0.17:0,0,0	0/1:15,0:15:26.12:32,0,26	0/0:14,0:14:4.36:0,4,63	0/1:31,0:31:2.42:2,0,45	1/1:33,0:33:0.47:1,0,0	1/1:18,0:18:8.75:68,9,0	0/1:16,0:16:11.38:11,0,65	0/1:8,0:8:34.64:35,0,56	0/0:23,0:25:23.63:0,24,219	0/1:20,0:20:23.23:71,0,23	0/0:16,2:18:5.88:0,6,47	1/1:20,0:19:6.01:59,6,0	1/1:19,1:18:11.86:109,12,0	0/1:30,0:29:41.53:103,0,42	0/1:20,0:20:10.80:21,0,11	0/1:20,0:20:2.13:57,0,2	0/1:15,0:14:5.51:21,0,6	0/1:31,0:31:0.01:0,0,0	0/0:6,0:6:3.01:0,3,32	0/1:12,0:12:26.35:36,0,26	0/1:47,0:47:3.54:201,0,4	1/1:20,3:23:15.46:177,15,0	1/1:22,0:21:2.62:78,3,0	0/1:33,0:33:49.83:62,0,50	1/1:14,0:13:10.81:79,11,0
chr10	13891095	.	T	TCC	6163.74	PASS	AB=0.644;AC=41;AF=0.732;AN=56;BaseQRankSum=-3.045;DP=575;FS=17.158;HRun=3;HaplotypeScore=97.1667;InbreedingCoeff=0.4693;MQ=57.38;MQ0=13;MQRankSum=-1.395;QD=13.37;ReadPosRankSum=-1.308;VQSLOD=0.6977;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:27:42.60:0,43,392	1/1:10,0:10:2.71:122,3,0	0/0:21,0:11:12.51:0,13,188	0/0:29,0:13:0.92:0,1,42	1/1:9,0:9:16.02:216,16,0	1/1:10,0:10:2.41:96,2,0	1/1:27,0:26:70.23:512,70,0	1/1:30,0:30:78.56:636,79,0	1/1:18,0:18:41.13:387,41,0	1/1:21,0:21:17.48:323,17,0	0/1:4,7:11:36.48:36,0,57	0/0:25,0:26:59.82:0,60,574	1/1:16,2:18:41:408,41,0	1/1:20,1:21:39.54:342,40,0	1/1:1,25:26:6.02:110,6,0	1/1:1,28:27:11.33:164,11,0	1/1:6,24:29:4.56:167,5,0	0/1:4,18:26:10.87:93,0,11	1/1:2,14:17:25.87:357,26,0	1/1:15,0:15:10.76:242,11,0	0/1:2,0:18:0.01:0,0,0	0/0:9,0:9:26.98:0,27,241	1/1:8,0:8:5.85:110,6,0	1/1:31,4:35:79.16:927,79,0	0/1:18,0:18:48.24:48,0,96	1/1:5,15:18:37.81:375,38,0	0/1:4,20:26:2.71:101,0,3	1/1:15,1:14:41.61:392,42,0
chr10	13891097	.	C	CCC	6227.27	PASS	AB=1.000;AC=41;AF=0.732;AN=56;BaseQRankSum=-2.962;DP=568;FS=18.506;HRun=1;HaplotypeScore=95.4479;InbreedingCoeff=0.4860;MQ=58.31;MQ0=14;MQRankSum=-1.654;QD=13.81;ReadPosRankSum=-1.449;VQSLOD=0.4273;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:27:43.35:0,43,394	1/1:10,0:10:2.71:122,3,0	0/0:23,0:11:12.51:0,13,188	0/0:30,0:14:0.92:0,1,42	1/1:8,0:9:16.02:216,16,0	1/1:10,0:10:2.41:96,2,0	1/1:27,0:26:70.23:512,70,0	1/1:32,0:32:78.56:636,79,0	1/1:18,0:18:41.13:387,41,0	1/1:13,6:21:17.48:323,17,0	0/1:10,0:10:36.48:36,0,57	0/0:26,0:26:59.82:0,60,574	1/1:19,0:19:41:408,41,0	1/1:21,0:21:38.76:340,39,0	1/1:25,0:25:6.02:110,6,0	1/1:29,0:27:11.33:164,11,0	1/1:30,0:28:7.52:187,8,0	0/1:27,0:27:10.87:93,0,11	1/1:18,0:18:28.84:377,29,0	1/1:14,0:14:10.79:242,11,0	0/1:17,0:16:0.01:0,0,0	0/0:9,0:9:26.98:0,27,241	1/1:7,0:7:5.85:110,6,0	1/1:33,0:34:80.36:941,80,0	0/1:15,0:15:48.24:48,0,96	1/1:18,0:17:37.85:375,38,0	0/1:23,0:23:0.29:112,0,0	1/1:16,0:14:41.61:392,42,0
chr10	13891800	.	G	GCA	16266.19	PASS	AB=0.614;AC=37;AF=0.661;AN=56;BaseQRankSum=5.885;DP=782;FS=4.422;HRun=0;HaplotypeScore=116.5810;InbreedingCoeff=0.4706;MQ=63.84;MQ0=0;MQRankSum=-0.403;QD=26.80;ReadPosRankSum=2.555;VQSLOD=5.8904;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:81.21:0,81,943	1/1:1,6:8:18.06:289,18,0	0/0:24,0:19:32.05:0,32,302	0/0:26,0:20:17.20:0,17,301	1/1:7,20:27:36.06:754,36,0	1/1:6,15:22:8.96:638,9,0	0/1:9,21:31:0.93:715,0,1	1/1:8,19:27:55.01:764,55,0	0/1:6,20:28:7.75:671,0,8	1/1:1,17:18:51.14:747,51,0	0/1:6,6:12:12.12:310,0,12	0/0:41,0:41:99:0,102,1165	1/1:7,28:36:74.27:1235,74,0	1/1:10,22:32:14.98:727,15,0	1/1:9,32:42:78.27:1251,78,0	1/1:6,33:40:69.24:1108,69,0	1/1:11,34:45:17.97:1276,18,0	1/1:4,19:24:21.03:828,21,0	1/1:5,11:16:33.01:438,33,0	0/1:5,7:13:92.49:259,0,92	0/1:23,45:71:64.53:1313,0,65	0/0:17,0:17:39.09:0,39,447	1/1:6,18:24:42.14:674,42,0	0/1:10,35:45:12.22:1279,0,12	0/0:26,0:26:48.04:0,48,545	0/1:13,11:25:30.27:459,0,30	1/1:2,4:6:12.04:193,12,0	1/1:6,9:15:21.07:337,21,0
chr10	13892142	.	TTTTTG	T	14152.62	PASS	AB=0.577;AC=42;AF=0.750;AN=56;BaseQRankSum=9.122;DP=686;FS=6.513;HRun=0;HaplotypeScore=125.2322;InbreedingCoeff=0.8059;MQ=58.97;MQ0=10;MQRankSum=0.281;QD=28.19;ReadPosRankSum=3.647;VQSLOD=4.2565;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:91.55:0,92,2383	1/1:0,12:12:24.08:447,24,0	0/0:39,0:14:12.14:0,12,152	0/0:40,0:12:12.63:0,13,105	0/1:6,15:21:5.70:651,0,6	1/1:4,21:25:45.15:842,45,0	0/1:7,21:28:37.10:490,0,37	1/1:10,15:23:39.04:565,39,0	1/1:7,17:24:32.80:615,33,0	1/1:9,21:30:57.12:1034,57,0	1/1:2,8:10:12.04:224,12,0	0/0:22,0:22:48.16:0,48,1268	1/1:5,20:25:39.13:730,39,0	1/1:5,19:24:42.14:786,42,0	1/1:10,22:32:40.39:781,40,0	1/1:2,24:26:51.17:950,51,0	1/1:7,24:31:51.04:913,51,0	1/1:7,13:20:21.07:389,21,0	1/1:11,12:22:35.23:613,35,0	1/1:8,9:17:24.08:446,24,0	1/1:10,10:20:18.06:337,18,0	0/0:23,0:23:63.22:0,63,1690	1/1:6,12:17:33.07:581,33,0	1/1:6,25:31:48.16:898,48,0	0/0:21,0:21:42.14:0,42,1058	1/1:5,14:19:45.07:796,45,0	1/1:8,24:32:42.14:786,42,0	1/1:1,8:9:15.05:281,15,0
chr10	13896385	.	G	GGGGA	758.90	PASS	AB=1.000;AC=22;AF=0.393;AN=56;BaseQRankSum=2.864;DP=300;FS=5.646;HRun=0;HaplotypeScore=68.2519;InbreedingCoeff=0.2455;MQ=84.19;MQ0=0;MQRankSum=-0.905;QD=5.98;ReadPosRankSum=5.020;VQSLOD=0.5717;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:35.56:0,36,311	1/1:4,0:4:5.70:29,6,0	0/0:18,0:15:15:0,15,111	0/0:19,0:17:34.82:0,35,330	0/0:3,0:3:3:0,3,26	0/1:6,0:6:2.05:2,0,53	0/0:35,0:35:29.42:0,29,317	0/0:11,0:11:13.56:0,14,111	0/1:6,0:6:33:41,0,33	0/0:4,0:4:6:0,6,54	0/0:1,0:1:3:0,3,25	0/0:30,0:30:65.91:0,66,601	0/1:9,0:9:51.13:51,0,94	1/1:2,0:2:3:26,3,0	1/1:2,0:15:8.56:213,9,0	1/1:5,8:16:12.76:177,13,0	0/1:18,0:17:13.22:13,0,128	1/1:2,6:8:9.03:199,9,0	0/1:9,0:9:16.09:16,0,63	0/0:10,0:10:18.45:0,18,152	0/1:16,0:16:54.91:64,0,55	0/0:10,0:10:18.01:0,18,180	1/1:2,0:2:3:27,3,0	0/1:4,0:4:5.56:6,0,41	0/0:8,0:8:20.99:0,21,208	0/0:6,0:6:10.82:0,11,83	0/1:9,0:9:39.78:40,0,50	1/1:3,0:3:2.98:27,3,0
chr10	13898658	.	AGTGT	A	4880.43	PASS	AB=0.813;AC=40;AF=0.769;AN=52;BaseQRankSum=3.155;DP=773;FS=7.709;HRun=0;HaplotypeScore=142.3267;InbreedingCoeff=0.3916;MQ=60.64;MQ0=15;MQRankSum=0.118;QD=8.19;ReadPosRankSum=2.925;VQSLOD=3.6085;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:31:44.87:0,45,815	1/1:9,5:13:9.91:119,10,0	./.	./.	0/1:7,10:17:27.46:86,0,27	1/1:14,0:25:9.48:85,9,0	1/1:20,0:29:3:28,3,0	0/1:34,0:33:7.45:55,0,7	1/1:9,12:22:1.73:261,2,0	0/1:20,2:22:1.43:238,0,1	1/1:7,5:12:6:94,6,0	0/0:26,0:27:44.08:0,44,735	1/1:17,15:32:26.93:374,27,0	1/1:25,3:29:34.80:382,35,0	1/1:12,13:26:23.80:357,24,0	1/1:24,8:34:47.92:685,48,0	0/1:17,12:29:18.23:224,0,18	1/1:17,0:17:9:94,9,0	1/1:21,1:21:11.99:153,12,0	1/1:14,9:23:15.77:219,16,0	1/1:72,41:113:19.62:286,20,0	0/0:18,0:18:27.09:0,27,436	1/1:3,3:7:3.01:47,3,0	1/1:8,21:30:20.63:459,21,0	0/0:31,2:33:0.86:0,1,777	1/1:19,14:33:40.09:421,40,0	1/1:4,1:9:12.03:166,12,0	1/1:12,1:13:3.01:47,3,0
chr10	13899960	.	G	GACACACA	1352.03	PASS	AB=0.684;AC=18;AF=0.333;AN=54;BaseQRankSum=9.344;DP=595;FS=8.517;HRun=0;HaplotypeScore=170.1757;InbreedingCoeff=-0.2579;MQ=68.04;MQ0=7;MQRankSum=-3.795;QD=3.83;ReadPosRankSum=-1.506;VQSLOD=1.9677;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:78.24:0,78,1879	0/1:7,0:10:99:116,0,103	0/0:17,0:12:26.83:0,27,545	0/0:27,0:18:51.12:0,51,983	0/1:2,0:9:5.17:5,0,119	0/1:8,0:14:29.30:29,0,143	0/0:40,0:45:65.91:0,66,1055	0/0:14,0:14:0.09:0,0,330	0/1:22,0:24:16.39:16,0,256	0/1:6,0:19:75.37:75,0,281	0/0:1,0:5:5.77:0,6,70	0/0:31,0:31:87.25:0,87,2128	0/1:6,0:23:99:213,0,132	0/1:5,0:15:40.02:40,0,115	0/1:4,0:21:82.57:83,0,109	0/0:14,0:15:15.02:0,15,214	0/1:9,0:33:74.12:312,0,74	0/1:23,0:28:60.29:60,0,491	0/0:10,0:11:10.22:0,10,175	1/1:2,0:2:3.01:50,3,0	0/1:58,0:58:99:103,0,801	0/0:17,0:16:41.78:0,42,869	./.	0/1:14,0:45:19.13:19,0,234	0/0:24,0:24:66.68:0,67,1668	0/1:7,1:29:99:259,0,513	0/1:11,0:17:96.10:96,0,421	1/1:0,0:4:5.74:30,6,0
chr10	13899962	.	G	GCACA	6290.19	PASS	AB=0.679;AC=41;AF=0.788;AN=52;BaseQRankSum=6.491;DP=683;FS=27.006;HRun=0;HaplotypeScore=168.3682;InbreedingCoeff=0.6459;MQ=62.71;MQ0=10;MQRankSum=-4.369;QD=11.96;ReadPosRankSum=-0.651;VQSLOD=2.5785;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:31:38.83:0,39,509	1/1:12,0:12:18.52:337,19,0	0/0:17,0:11:3.01:0,3,44	./.	1/1:15,0:15:3.01:71,3,0	1/1:18,0:18:15.05:267,15,0	0/1:28,22:53:99:226,0,130	1/1:19,0:19:14.04:296,14,0	1/1:14,0:28:2.56:48,3,0	1/1:24,0:22:45.66:620,46,0	1/1:7,0:7:5.99:48,6,0	0/0:30,0:30:69.19:0,69,1044	1/1:25,0:25:21.54:345,22,0	1/1:19,0:18:8.97:139,9,0	1/1:26,0:27:8.96:146,9,0	1/1:8,0:19:5.68:71,6,0	1/1:34,0:34:36.09:646,36,0	1/1:31,0:31:44.52:717,45,0	1/1:14,0:13:11.31:199,11,0	1/1:5,0:5:2.76:50,3,0	1/1:70,0:69:31:645,31,0	0/0:16,0:15:30.07:0,30,412	./.	1/1:46,0:46:17.67:359,18,0	0/0:22,0:24:21.16:0,21,565	1/1:33,0:33:42.03:586,42,0	1/1:22,0:22:21.04:334,21,0	1/1:5,0:5:6.02:141,6,0
chr10	13903193	.	T	TAA	5739.48	PASS	AB=0.828;AC=44;AF=0.786;AN=56;BaseQRankSum=-1.813;DP=559;FS=6.266;HRun=13;HaplotypeScore=83.2104;InbreedingCoeff=0.7362;MQ=57.93;MQ0=28;MQRankSum=-1.327;QD=13.67;ReadPosRankSum=-0.954;VQSLOD=3.6278;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:28:12.46:0,12,226	1/1:3,3:7:12.04:155,12,0	0/0:83,0:13:15.93:0,16,97	0/1:82,0:12:7.53:8,0,21	1/1:5,10:16:24.48:275,24,0	1/1:3,3:15:26.49:173,26,0	0/1:8,0:16:8.46:34,0,8	1/1:5,17:22:54.54:690,55,0	1/1:2,9:11:21.07:275,21,0	1/1:8,8:18:30.09:378,30,0	1/1:8,5:14:22.82:243,23,0	0/0:12,0:12:10.72:0,11,103	1/1:3,6:10:17.91:183,18,0	1/1:5,3:8:13.29:165,13,0	1/1:9,4:13:12.04:164,12,0	1/1:4,4:9:9.50:123,10,0	1/1:11,10:21:41.60:498,42,0	1/1:3,6:11:20.40:224,20,0	1/1:7,7:13:22.62:282,23,0	1/1:7,11:21:38.60:426,39,0	1/1:4,2:6:9.02:106,9,0	0/0:4,0:4:11.99:0,12,104	1/1:2,5:9:17.44:188,17,0	1/1:3,4:9:12.03:138,12,0	0/0:9,0:10:11.80:0,12,150	1/1:5,10:15:27.07:348,27,0	1/1:11,11:25:39.75:460,40,0	1/1:26,9:28:15.52:203,16,0
chr10	13903605	.	G	GA	9867.33	PASS	AB=0.963;AC=41;AF=0.732;AN=56;BaseQRankSum=2.562;DP=673;FS=18.713;HRun=9;HaplotypeScore=123.1957;InbreedingCoeff=0.9007;MQ=69.17;MQ0=8;MQRankSum=-3.853;QD=19.97;ReadPosRankSum=-0.033;VQSLOD=3.5472;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:51.30:0,51,797	1/1:2,5:7:18.05:197,18,0	0/0:41,0:24:17.15:0,17,230	0/0:27,0:17:17.99:0,18,154	1/1:10,16:26:63.03:656,63,0	0/0:25,0:25:44.96:0,45,389	0/0:21,0:21:32.96:0,33,286	1/1:17,9:27:34.28:398,34,0	1/1:14,6:20:36.26:392,36,0	1/1:11,15:24:48.11:520,48,0	1/1:7,12:19:42.07:450,42,0	0/1:25,1:26:22.40:22,0,238	1/1:13,8:22:42.06:447,42,0	1/1:10,8:18:33.02:346,33,0	1/1:20,16:37:75.74:753,76,0	1/1:12,23:35:89.79:916,90,0	1/1:13,21:34:81.04:868,81,0	1/1:15,4:17:17.90:214,18,0	1/1:18,9:28:56.52:528,57,0	1/1:10,8:19:32.38:311,32,0	1/1:7,11:17:39.10:428,39,0	0/0:9,0:9:20.98:0,21,178	1/1:5,12:18:39.82:411,40,0	1/1:5,21:26:39.09:422,39,0	0/0:12,0:12:23.35:0,23,190	1/1:16,13:29:57.57:595,58,0	1/1:14,17:31:77.53:818,78,0	1/1:5,2:7:18.01:176,18,0
chr10	13903623	.	CAAA	C	9352.86	PASS	AB=0.719;AC=39;AF=0.696;AN=56;BaseQRankSum=3.424;DP=697;FS=3.379;HRun=14;HaplotypeScore=148.0705;InbreedingCoeff=0.7679;MQ=63.65;MQ0=14;MQRankSum=-5.937;QD=17.75;ReadPosRankSum=3.246;VQSLOD=2.9382;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:46:99:0,116,1734	1/1:2,4:6:15.03:173,15,0	0/1:52,0:25:14.39:14,0,172	0/0:31,0:16:25.09:0,25,152	1/1:8,17:25:59.74:600,60,0	0/0:7,0:26:39.11:0,39,581	0/0:7,0:15:27.07:0,27,353	1/1:7,18:27:61.34:607,61,0	0/1:4,19:22:18.13:377,0,18	1/1:7,16:23:47.91:511,48,0	1/1:6,12:19:7.46:300,7,0	0/0:24,0:25:63.15:0,63,945	1/1:8,16:23:35.09:380,35,0	1/1:3,12:15:25.72:291,26,0	1/1:4,32:36:68.04:762,68,0	1/1:10,28:38:47.02:732,47,0	1/1:6,22:28:62.93:721,63,0	0/1:8,10:16:1.18:218,0,1	1/1:12,19:31:36.21:624,36,0	1/1:3,13:16:35.89:393,36,0	1/1:7,14:20:23.80:264,24,0	0/0:8,0:10:24.03:0,24,332	1/1:7,13:20:30.44:291,30,0	1/1:18,7:27:28.80:338,29,0	0/0:15,0:17:38.93:0,39,508	1/1:7,26:33:80.90:869,81,0	1/1:8,22:31:56.99:647,57,0	1/1:1,6:7:21.06:241,21,0
chr10	13904540	.	CT	C	6431.19	PASS	AB=0.591;AC=39;AF=0.722;AN=54;BaseQRankSum=2.358;DP=491;FS=14.834;HRun=11;HaplotypeScore=60.3789;InbreedingCoeff=0.9058;MQ=64.51;MQ0=9;MQRankSum=-1.981;QD=17.24;ReadPosRankSum=1.931;VQSLOD=4.5136;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:76.05:0,76,788	1/1:3,4:7:11.98:98,12,0	0/0:13,0:11:23.17:0,23,189	0/0:7,0:7:5.64:0,6,78	1/1:2,27:28:62.69:517,63,0	0/0:5,0:20:42.93:0,43,231	0/0:4,0:11:17.23:0,17,95	1/1:12,24:30:65.86:536,66,0	0/1:4,9:13:2.04:192,0,2	1/1:6,20:26:59.91:493,60,0	1/1:5,15:19:38.87:314,39,0	0/0:12,0:10:26.93:0,27,288	1/1:1,9:10:17.98:148,18,0	1/1:2,7:9:23.48:179,23,0	1/1:4,15:19:35.95:295,36,0	1/1:3,9:13:29:228,29,0	1/1:1,22:23:59.93:492,60,0	1/1:7,25:32:39.91:534,40,0	1/1:6,18:23:47.81:380,48,0	1/1:3,15:18:44.94:369,45,0	1/1:3,5:8:14.97:123,15,0	./.	1/1:4,11:15:29.96:246,30,0	1/1:2,5:7:14.98:123,15,0	0/0:22,0:22:54.04:0,54,553	1/1:5,17:22:38.67:400,39,0	1/1:6,23:29:59.91:493,60,0	1/1:1,11:11:32.96:271,33,0
chr10	13904668	.	A	AG	3178.14	PASS	AC=40;AF=0.769;AN=52;BaseQRankSum=12.328;DP=343;FS=5.461;HRun=2;HaplotypeScore=197.3384;InbreedingCoeff=0.9211;MQ=41.44;MQ0=20;MQRankSum=-10.874;QD=15.89;ReadPosRankSum=-0.362;VQSLOD=3.1717;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:48:99:0,144,1753	1/1:6,0:6:17.75:119,18,0	./.	./.	1/1:11,0:11:10.37:152,10,0	0/0:20,0:20:54.16:0,54,656	0/0:22,0:19:39.08:0,39,465	1/1:22,0:7:17.88:156,18,0	1/1:11,0:11:29.83:239,30,0	1/1:5,1:6:17.70:132,18,0	1/1:6,1:7:11.88:94,12,0	0/0:18,0:17:48.15:0,48,595	1/1:7,0:7:11.97:97,12,0	1/1:9,0:9:17:132,17,0	1/1:12,0:12:29.87:241,30,0	1/1:21,0:21:59.38:445,59,0	1/1:14,3:17:26.78:225,27,0	1/1:5,2:7:14.73:108,15,0	1/1:7,0:7:20.85:175,21,0	1/1:9,0:9:13.60:112,14,0	1/1:7,0:6:9.01:109,9,0	0/0:13,0:13:36.11:0,36,446	1/1:8,0:8:18.01:166,18,0	1/1:8,0:8:12:118,12,0	0/0:9,0:9:27.08:0,27,333	1/1:8,0:8:23.59:186,24,0	1/1:14,0:14:41.59:323,42,0	1/1:3,0:2:5.84:34,6,0
chr10	13905418	.	TA	T	4155.20	PASS	AB=0.583;AC=39;AF=0.696;AN=56;BaseQRankSum=5.092;DP=406;FS=6.853;HRun=12;HaplotypeScore=44.0165;InbreedingCoeff=0.8228;MQ=64.27;MQ0=8;MQRankSum=1.626;QD=14.33;ReadPosRankSum=1.880;VQSLOD=3.8707;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:26:53.88:0,54,493	1/1:2,4:6:11.95:93,12,0	0/0:14,0:9:2.72:0,3,52	0/0:11,1:8:7.59:0,8,64	1/1:5,10:17:34.72:251,35,0	0/0:23,0:23:49.23:0,49,525	0/0:7,0:6:9.02:0,9,91	1/1:12,14:24:10.58:262,11,0	1/1:0,9:9:23.91:186,24,0	1/1:4,11:15:34.90:261,35,0	0/1:4,10:14:0.81:171,0,1	0/0:8,1:9:0.79:0,1,182	1/1:0,8:8:20.92:162,21,0	1/1:6,5:12:13.82:99,14,0	1/1:2,8:10:20.92:163,21,0	1/1:3,8:11:20.88:162,21,0	1/1:5,23:29:45.87:337,46,0	1/1:6,15:21:18.39:158,18,0	1/1:4,11:13:32.86:254,33,0	1/1:1,7:8:20.89:158,21,0	1/1:0,8:8:17.93:139,18,0	0/0:5,0:5:9:0,9,85	1/1:3,4:8:16.93:117,17,0	1/1:0,10:10:29.89:232,30,0	0/0:18,0:18:37:0,37,357	1/1:10,21:32:47.41:486,47,0	1/1:8,13:21:38.82:302,39,0	1/1:1,7:8:20.90:163,21,0
chr10	13910541	.	C	CTT	12927.58	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-11.066;DP=538;FS=11.361;HRun=9;HaplotypeScore=65.5579;InbreedingCoeff=0.9847;MQ=71.24;MQ0=5;MQRankSum=-3.216;QD=33.67;ReadPosRankSum=-0.987;VQSLOD=3.7549;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,114,1204	1/1:3,13:16:39.13:598,39,0	0/0:26,0:21:29.51:0,30,288	0/0:13,0:11:20.26:0,20,194	1/1:3,16:19:45.11:666,45,0	0/0:22,0:22:54.11:0,54,574	0/0:16,0:18:41.54:0,42,407	1/1:9,30:42:95.75:1392,96,0	1/1:2,14:18:45.11:666,45,0	1/1:3,15:17:45.14:670,45,0	1/1:4,16:20:48.12:697,48,0	0/0:9,0:9:24.06:0,24,255	1/1:1,11:12:30.10:461,30,0	1/1:4,6:10:18.06:268,18,0	1/1:2,0:18:37.43:128,37,0	1/1:1,15:18:50.62:721,51,0	1/1:6,27:34:85.75:1227,86,0	1/1:4,21:25:54.10:778,54,0	1/1:4,16:19:34.48:703,34,0	1/1:4,17:21:42.14:646,42,0	1/1:1,6:7:18.06:277,18,0	0/0:7,0:7:18.04:0,18,192	1/1:0,4:4:9.03:139,9,0	1/1:1,12:12:27.09:416,27,0	0/0:15,0:15:36.08:0,36,383	1/1:3,19:23:60.20:906,60,0	1/1:3,19:24:53.67:793,54,0	1/1:0,18:18:51.17:775,51,0
chr10	13910747	.	C	CTTTC	308.49	PASS	AB=0.603;AC=4;AF=0.077;AN=52;BaseQRankSum=3.408;DP=391;FS=4.374;HRun=0;HaplotypeScore=66.6098;InbreedingCoeff=0.4279;MQ=53.38;MQ0=10;MQRankSum=-5.468;QD=7.17;ReadPosRankSum=0.774;VQSLOD=1.7767;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:36:69.61:0,70,899	0/0:1,0:1:3:0,3,27	./.	0/0:12,0:3:3.01:0,3,21	0/0:3,0:6:11.49:0,11,85	0/1:3,1:19:1.97:177,0,2	1/1:2,0:15:12.04:226,12,0	0/0:13,0:22:25.32:0,25,278	0/0:5,0:14:14.86:0,15,114	0/0:5,0:8:17.85:0,18,188	0/0:4,0:5:10.83:0,11,88	0/0:9,0:14:12.02:0,12,129	0/0:4,0:8:11.99:0,12,101	0/0:2,0:7:11.92:0,12,116	0/0:3,0:13:17.89:0,18,151	0/0:2,0:16:20.90:0,21,166	0/0:8,0:33:41.41:0,41,310	0/0:8,0:20:37.65:0,38,283	0/0:13,0:24:49.49:0,49,400	0/1:3,0:6:10.86:11,0,17	0/0:6,0:16:23.91:0,24,185	./.	0/0:2,0:5:7.81:0,8,54	0/0:12,0:21:20.33:0,20,235	0/0:9,0:8:18.05:0,18,237	0/0:4,0:10:17.98:0,18,165	0/0:7,0:15:26.15:0,26,247	0/0:4,0:9:24.59:0,25,198
chr10	13910952	.	TA	T	4696.11	PASS	AC=40;AF=0.769;AN=52;BaseQRankSum=3.389;DP=216;FS=0.000;HRun=4;HaplotypeScore=27.8340;InbreedingCoeff=0.7488;MQ=63.89;MQ0=3;MQRankSum=2.803;QD=28.46;ReadPosRankSum=0.415;VQSLOD=3.1991;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:33.09:0,33,419	1/1:0,2:2:6.02:72,6,0	0/0:7,0:3:6:0,6,66	0/0:6,0:4:1.25:0,1,3	1/1:2,10:12:27.08:319,27,0	0/0:16,0:16:30.08:0,30,369	./.	1/1:3,24:26:66.20:785,66,0	1/1:1,3:4:9.03:107,9,0	1/1:2,5:7:15.05:179,15,0	1/1:3,2:5:8.92:88,9,0	0/0:4,0:4:12.04:0,12,159	1/1:2,0:2:6:59,6,0	1/1:1,1:2:5.99:56,6,0	1/1:2,4:6:18.03:190,18,0	1/1:0,6:6:18.05:213,18,0	1/1:4,18:22:11.25:518,11,0	1/1:1,12:13:33.10:392,33,0	1/1:1,11:12:33.03:346,33,0	1/1:0,3:3:9.03:107,9,0	1/1:1,1:2:3.01:36,3,0	./.	1/1:1,1:2:3.01:36,3,0	1/1:1,3:4:11.93:123,12,0	0/0:7,0:7:18.01:0,18,219	1/1:2,7:9:21.06:250,21,0	1/1:0,16:16:41.22:498,41,0	1/1:0,9:9:27.08:322,27,0
chr10	13911028	.	CT	C	803.49	PASS	AB=0.721;AC=24;AF=0.462;AN=52;BaseQRankSum=-1.555;DP=255;FS=0.000;HRun=16;HaplotypeScore=41.2246;InbreedingCoeff=0.0884;MQ=67.99;MQ0=10;MQRankSum=-0.071;QD=4.93;ReadPosRankSum=2.605;VQSLOD=0.9871;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:9:10.31:0,10,56	0/0:1,0:2:2.84:0,3,14	0/0:36,0:10:10.30:0,10,72	0/0:18,0:7:12.18:0,12,77	0/1:6,1:9:15.93:16,0,31	0/0:10,0:10:15.03:0,15,90	0/0:0,0:1:2.84:0,3,14	0/1:13,7:20:17.31:109,0,17	1/1:3,0:3:2.87:18,3,0	0/1:5,4:10:7.77:60,0,8	0/1:8,3:11:13.60:42,0,14	./.	0/1:3,0:4:0.79:1,0,20	0/1:1,1:2:12.01:12,0,19	1/1:1,5:6:11.75:72,12,0	0/1:2,1:3:12.02:12,0,19	1/1:13,10:23:29.07:179,29,0	1/1:6,4:10:13.72:78,14,0	1/1:10,1:8:3.94:33,4,0	1/1:3,0:4:2.84:18,3,0	0/0:2,0:2:3:0,3,25	0/0:0,0:1:2.84:0,3,14	./.	1/1:1,3:4:11.77:72,12,0	0/0:7,0:8:14.83:0,15,115	0/1:3,5:8:10.51:57,0,11	0/1:8,4:11:13.57:42,0,14	0/1:9,10:21:53.16:146,0,53
chr10	13911423	.	C	CGT	518.70	PASS	AB=0.897;AC=20;AF=0.400;AN=50;BaseQRankSum=-0.416;DP=521;FS=2.320;HRun=0;HaplotypeScore=78.3444;InbreedingCoeff=0.0185;MQ=60.05;MQ0=17;MQRankSum=-1.056;QD=1.83;ReadPosRankSum=-0.937;VQSLOD=1.7657;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:20.66:0,21,163	1/1:8,0:8:3.01:34,3,0	./.	./.	0/0:15,0:14:2.68:0,3,11	0/1:22,1:21:32.89:33,0,76	0/1:30,0:30:48.53:49,0,78	./.	0/1:10,3:13:25.71:37,0,26	0/1:13,0:14:7.21:7,0,8	0/0:9,1:9:3:0,3,32	0/0:19,0:20:8.86:0,9,78	0/0:9,0:9:6.01:0,6,64	0/1:16,2:18:35.04:35,0,55	0/0:19,0:24:2.84:0,3,14	0/0:11,0:14:5.68:0,6,28	1/1:17,11:28:12.49:152,12,0	0/0:14,0:18:5.68:0,6,28	0/1:19,0:19:20.10:20,0,26	0/1:6,0:6:0:0,0,0	0/1:33,9:41:67.46:155,0,67	0/0:6,0:6:2.90:0,3,32	0/1:7,4:10:0:0,0,0	0/1:22,7:29:32.09:32,0,75	0/0:18,0:18:12.03:0,12,128	1/1:19,0:17:3.01:36,3,0	1/1:9,0:9:3.01:42,3,0	1/1:10,0:9:3:28,3,0
chr10	13911676	.	CTCTCTCTCTT	C	9221.22	PASS	AB=0.563;AC=39;AF=0.696;AN=56;BaseQRankSum=9.243;DP=437;FS=1.600;HRun=0;HaplotypeScore=115.6819;InbreedingCoeff=0.6991;MQ=50.92;MQ0=18;MQRankSum=-5.261;QD=30.43;ReadPosRankSum=0.398;VQSLOD=4.3964;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:63.65:0,64,2505	1/1:1,3:3:3.01:101,3,0	0/0:8,0:3:9.03:0,9,233	0/0:22,0:3:4.82:0,5,34	1/1:2,8:10:3.01:58,3,0	0/0:18,0:17:51.11:0,51,1770	0/0:22,0:22:63.13:0,63,2049	1/1:14,3:16:37:439,37,0	1/1:3,11:13:9.03:299,9,0	1/1:4,28:31:72.38:1378,72,0	1/1:4,2:4:5.92:42,6,0	0/0:12,0:12:36.11:0,36,1535	1/1:5,10:15:2.53:100,3,0	1/1:1,9:10:9.03:302,9,0	1/1:6,13:17:21.07:619,21,0	1/1:3,21:24:32.66:1071,33,0	1/1:1,18:19:12.04:403,12,0	1/1:3,10:12:18.03:526,18,0	1/1:5,19:24:62.84:877,63,0	1/1:2,11:13:6.02:201,6,0	1/1:10,0:9:9:127,9,0	0/0:7,0:6:15.52:0,16,575	1/1:2,12:14:17.68:595,18,0	0/1:4,14:18:11.94:384,0,12	0/0:19,0:19:54.17:0,54,2214	1/1:4,18:21:50.21:1008,50,0	1/1:1,10:11:0.39:389,0,0	1/1:1,7:7:9.03:302,9,0
chr10	13912314	.	T	TA	9001.17	PASS	AB=0.583;AC=39;AF=0.696;AN=56;BaseQRankSum=-9.745;DP=516;FS=2.910;HRun=9;HaplotypeScore=51.2828;InbreedingCoeff=0.9370;MQ=65.10;MQ0=0;MQRankSum=-0.997;QD=24.66;ReadPosRankSum=-0.108;VQSLOD=5.4802;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,1:37:71.76:0,72,846	1/1:2,12:14:27.07:299,27,0	0/0:9,0:8:17.59:0,18,134	0/0:10,0:10:14.93:0,15,122	1/1:7,17:24:48.09:517,48,0	0/0:23,0:23:45.11:0,45,457	0/0:27,0:27:65.88:0,66,573	1/1:4,19:22:57.12:606,57,0	1/1:2,17:19:39.11:431,39,0	1/1:1,18:19:54.14:591,54,0	1/1:5,8:13:21.06:232,21,0	0/0:15,0:15:35.98:0,36,312	1/1:0,11:11:29.78:332,30,0	1/1:3,9:12:27.07:299,27,0	1/1:7,17:24:45.12:498,45,0	1/1:2,18:20:42.10:457,42,0	1/1:3,18:21:48.13:531,48,0	1/1:1,15:17:44.95:478,45,0	1/1:3,18:21:54.13:589,54,0	1/1:3,16:19:44.93:431,45,0	1/1:3,17:20:36.10:398,36,0	0/0:12,0:12:26.99:0,27,234	1/1:0,11:11:27.54:299,28,0	0/1:4,10:14:1.98:208,0,2	0/0:18,0:18:41.98:0,42,364	1/1:4,31:35:93.22:1009,93,0	1/1:1,20:21:60.16:664,60,0	1/1:0,6:6:12.03:133,12,0
chr10	13915643	.	TCACACA	T	3447.34	PASS	AB=0.533;AC=29;AF=0.604;AN=48;BaseQRankSum=1.709;DP=404;FS=3.072;HRun=0;HaplotypeScore=76.4453;InbreedingCoeff=0.6947;MQ=61.93;MQ0=24;MQRankSum=-4.055;QD=19.15;ReadPosRankSum=1.819;VQSLOD=3.1272;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:42.13:0,42,941	1/1:0,5:5:3.01:33,3,0	0/0:22,0:11:30.08:0,30,709	0/0:40,0:26:62.93:0,63,1675	./.	0/0:12,0:11:23.82:0,24,241	0/0:12,0:12:10.99:0,11,203	1/1:6,16:21:48.07:712,48,0	0/1:2,14:16:7.86:47,0,8	1/1:5,7:11:8.90:148,9,0	./.	0/0:17,0:14:32.93:0,33,716	1/1:3,1:3:6.02:120,6,0	1/1:9,2:11:9.03:188,9,0	0/0:5,20:25:0:0,0,0	1/1:11,20:29:11.28:215,11,0	1/1:11,0:13:29.09:555,29,0	1/1:2,3:4:3.01:61,3,0	1/1:6,1:6:4.98:86,5,0	1/1:0,4:4:3.01:56,3,0	./.	0/0:9,0:8:17.91:0,18,440	./.	1/1:13,0:13:3.01:43,3,0	0/0:9,0:8:15.05:0,15,375	1/1:3,14:15:42.14:804,42,0	1/1:5,0:6:12.03:207,12,0	1/1:3,9:9:9.03:172,9,0
chr10	13915649	.	ACACACACT	A	3501.29	PASS	AB=1.000;AC=30;AF=0.625;AN=48;BaseQRankSum=1.509;DP=411;FS=3.087;HRun=0;HaplotypeScore=80.9174;InbreedingCoeff=0.6884;MQ=55.74;MQ0=36;MQRankSum=-3.574;QD=17.08;ReadPosRankSum=2.671;VQSLOD=2.0281;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:42.13:0,42,929	1/1:5,0:5:3.01:33,3,0	0/0:21,0:10:16.81:0,17,672	0/0:38,0:24:63.69:0,64,1675	./.	0/0:15,0:14:26.95:0,27,265	0/0:16,0:15:13.91:0,14,240	1/1:19,0:18:48.07:712,48,0	1/1:15,0:15:1.68:51,2,0	1/1:11,0:10:8.90:148,9,0	./.	0/0:19,0:15:33.85:0,34,738	0/1:9,0:7:6.43:111,0,6	1/1:8,0:8:8.74:187,9,0	0/1:26,0:24:0:0,0,0	1/1:27,0:25:9.67:212,10,0	1/1:16,0:13:28.36:574,28,0	1/1:5,0:4:3.01:61,3,0	1/1:8,0:6:7.88:101,8,0	1/1:5,0:4:3.01:56,3,0	./.	0/0:10,0:9:18.06:0,18,441	./.	1/1:1,12:13:3.01:71,3,0	0/0:10,0:7:15.05:0,15,396	1/1:18,0:15:42.01:803,42,0	1/1:8,0:7:11.97:207,12,0	1/1:12,0:9:9.03:172,9,0
chr10	13917704	.	C	CT	4999.16	PASS	AC=40;AF=0.741;AN=54;BaseQRankSum=-9.534;DP=405;FS=1.077;HRun=10;HaplotypeScore=42.1101;InbreedingCoeff=0.8935;MQ=61.78;MQ0=16;MQRankSum=0.293;QD=18.25;ReadPosRankSum=0.854;VQSLOD=5.1287;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:36:86.80:0,87,703	1/1:0,4:4:6.02:64,6,0	0/0:18,0:13:17.82:0,18,123	0/0:8,0:4:5.94:0,6,43	1/1:4,17:21:36.74:354,37,0	0/0:4,0:16:18.32:0,18,53	0/0:2,0:14:22.41:0,22,65	1/1:13,12:22:27.03:269,27,0	1/1:1,5:6:9.02:96,9,0	1/1:6,11:16:23.86:256,24,0	1/1:2,7:9:15.04:160,15,0	0/0:17,0:17:43.90:0,44,341	1/1:3,7:8:23.85:236,24,0	1/1:0,9:8:21.05:222,21,0	1/1:2,9:10:21.05:224,21,0	1/1:1,7:8:21.05:224,21,0	1/1:8,27:33:13.79:612,14,0	1/1:3,20:22:48.12:511,48,0	1/1:5,10:15:18.04:186,18,0	1/1:2,8:10:24.06:256,24,0	1/1:2,7:9:12.03:128,12,0	./.	1/1:1,4:5:12.03:128,12,0	1/1:2,1:3:3.01:32,3,0	0/0:15,0:14:26.93:0,27,222	1/1:6,19:25:33.50:497,34,0	1/1:3,14:17:30.08:320,30,0	1/1:3,8:10:21.05:224,21,0
chr10	13917911	.	C	CTT	3409.70	PASS	AB=0.829;AC=40;AF=0.714;AN=56;BaseQRankSum=2.099;DP=401;FS=4.767;HRun=14;HaplotypeScore=75.4674;InbreedingCoeff=0.4778;MQ=49.59;MQ0=14;MQRankSum=-4.278;QD=11.22;ReadPosRankSum=-1.312;VQSLOD=2.3266;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:39:55.33:0,55,452	0/1:2,0:2:0:0,0,0	0/0:12,0:9:4.56:0,5,45	0/0:7,0:5:1.49:0,1,4	1/1:8,3:13:21.01:234,21,0	0/1:8,0:13:14.55:20,0,15	0/1:12,0:16:40.48:40,0,78	1/1:18,4:22:1.26:177,1,0	1/1:2,3:5:10.85:123,11,0	1/1:12,5:21:22.18:199,22,0	1/1:7,7:14:17.95:186,18,0	0/0:14,0:15:26.41:0,26,201	1/1:6,3:9:16.41:122,16,0	1/1:9,2:8:21.62:192,22,0	1/1:4,0:11:10.37:35,10,0	1/1:6,2:13:3.10:136,3,0	1/1:10,8:18:9.93:374,10,0	1/1:12,1:21:4.61:115,5,0	1/1:14,4:16:26.53:271,27,0	1/1:1,2:3:5.33:28,5,0	1/1:5,3:6:9.03:116,9,0	0/0:6,0:8:8.56:0,9,97	1/1:4,4:8:11.40:126,11,0	1/1:8,5:14:14.30:122,14,0	0/0:11,0:11:3.40:0,3,67	1/1:11,11:24:45.67:492,46,0	1/1:6,2:8:19.56:209,20,0	0/1:11,2:13:10.73:93,0,11
chr10	13918352	.	TTCA	T	14271.27	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=13.286;DP=739;FS=2.889;HRun=0;HaplotypeScore=109.4520;InbreedingCoeff=0.9434;MQ=58.09;MQ0=2;MQRankSum=3.570;QD=28.09;ReadPosRankSum=5.083;VQSLOD=4.6125;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:50:99:0,117,2352	1/1:2,5:7:6.01:90,6,0	0/0:32,0:19:38.37:0,38,737	0/0:28,0:23:26.45:0,26,717	1/1:1,17:18:42.06:600,42,0	0/0:22,0:22:57.18:0,57,1143	0/0:30,0:30:76.62:0,77,1604	1/1:3,16:19:45.15:663,45,0	1/1:4,25:30:54.18:806,54,0	1/1:5,30:35:90.29:1322,90,0	1/1:3,14:17:9.10:334,9,0	0/0:33,0:33:84.25:0,84,1611	1/1:5,21:26:57.19:850,57,0	1/1:4,16:20:30.10:434,30,0	1/1:7,31:38:3.35:878,3,0	1/1:5,35:40:81.27:1210,81,0	1/1:6,20:26:48.16:718,48,0	1/1:1,20:21:45.15:673,45,0	1/1:3,17:18:48.14:689,48,0	1/1:2,11:13:29.99:397,30,0	1/1:5,35:40:57.19:845,57,0	0/0:25,0:25:69.24:0,69,1417	1/1:1,15:16:21.07:314,21,0	1/1:8,39:47:74.99:1121,75,0	0/0:9,0:9:21.07:0,21,440	1/1:6,27:33:74.23:1173,74,0	1/1:7,25:32:60.20:886,60,0	1/1:1,9:9:18.06:269,18,0
chr10	13918691	.	C	CAT	251.70	PASS	AB=1.000;AC=10;AF=0.185;AN=54;BaseQRankSum=-3.858;DP=305;FS=11.048;HRun=0;HaplotypeScore=65.4931;InbreedingCoeff=0.1857;MQ=73.14;MQ0=0;MQRankSum=0.280;QD=3.76;ReadPosRankSum=-1.845;VQSLOD=0.3156;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:24:47.98:0,48,565	0/0:2,0:2:5.98:0,6,48	0/0:14,0:8:0.46:0,0,31	0/1:13,0:8:13.83:14,0,14	0/0:6,0:6:8.64:0,9,54	1/1:1,5:6:15.05:245,15,0	1/1:3,3:6:6.02:98,6,0	0/0:48,0:48:85.65:0,86,537	0/0:0,0:2:5.68:0,6,28	0/1:11,0:11:1.51:2,0,50	0/1:5,0:5:6.81:7,0,15	0/0:6,0:6:9.03:0,9,110	0/1:9,0:9:0.60:1,0,55	0/0:5,0:5:2.50:0,2,9	0/0:10,0:10:11.93:0,12,89	0/0:7,0:7:11.89:0,12,82	0/0:30,0:30:58.55:0,59,488	0/0:22,0:22:30.65:0,31,296	0/1:12,0:12:2.46:2,0,52	0/0:3,0:6:2.98:0,3,21	0/0:3,0:3:8.93:0,9,63	./.	0/1:5,0:5:6.57:7,0,15	0/0:4,0:4:5.94:0,6,41	0/0:9,0:9:15.05:0,15,182	0/0:5,0:5:8.65:0,9,50	0/0:11,0:11:5:0,5,94	0/0:23,0:23:55.08:0,55,329
chr10	13919522	.	A	ATTTT	9827.58	PASS	AB=0.875;AC=41;AF=0.732;AN=56;BaseQRankSum=1.386;DP=640;FS=1.226;HRun=16;HaplotypeScore=146.3204;InbreedingCoeff=0.7509;MQ=72.42;MQ0=4;MQRankSum=-2.223;QD=20.82;ReadPosRankSum=-3.426;VQSLOD=1.8753;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:27:31.69:0,32,384	1/1:2,0:10:11.95:131,12,0	0/0:37,0:20:0.30:0,0,45	0/0:33,0:18:5.06:0,5,54	1/1:21,0:24:40.80:459,41,0	0/1:15,0:21:20.23:20,0,227	0/0:15,0:19:25.95:0,26,260	1/1:23,10:35:53.63:786,54,0	1/1:13,0:13:27.09:411,27,0	1/1:14,16:32:76.04:999,76,0	1/1:23,0:23:49.59:617,50,0	0/0:18,0:18:1.04:0,1,21	1/1:28,0:27:54.17:840,54,0	1/1:18,0:17:20.28:270,20,0	1/1:7,0:21:16.80:172,17,0	1/1:20,0:20:40.69:613,41,0	1/1:31,0:31:52.88:763,53,0	1/1:19,0:19:37:575,37,0	1/1:14,2:22:27.07:389,27,0	1/1:13,0:24:49.38:690,49,0	1/1:11,0:17:18.42:206,18,0	0/0:14,0:18:16.28:0,16,157	1/1:19,0:19:19.30:223,19,0	1/1:8,0:16:8.98:122,9,0	0/0:10,0:15:6.39:0,6,62	1/1:27,0:27:51.14:742,51,0	1/1:29,0:28:33.08:506,33,0	1/1:16,0:16:24.01:293,24,0
chr10	13920187	.	AC	A	18441.41	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=12.492;DP=705;FS=7.738;HRun=2;HaplotypeScore=71.7446;InbreedingCoeff=0.9953;MQ=75.95;MQ0=0;MQRankSum=-1.439;QD=36.23;ReadPosRankSum=3.208;VQSLOD=5.4404;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:99:0,99,1461	1/1:0,5:5:15.05:195,15,0	0/0:9,0:9:21.04:0,21,250	0/0:18,0:18:19.14:0,19,445	1/1:1,36:37:99:1284,99,0	0/0:27,0:27:81.26:0,81,1194	0/0:33,0:33:99:0,99,1482	1/1:0,32:32:96.29:1218,96,0	1/1:0,20:20:54.18:701,54,0	1/1:0,20:20:60.20:779,60,0	1/1:1,21:22:57.19:740,57,0	0/0:33,0:33:99:0,99,1445	1/1:0,14:14:39.13:506,39,0	1/1:0,24:24:72.23:935,72,0	1/1:1,33:34:93.30:1208,93,0	1/1:0,30:30:87.28:1129,87,0	1/1:0,41:41:99:1519,117,0	1/1:0,18:18:54.18:701,54,0	1/1:2,21:23:60.19:779,60,0	1/1:0,21:21:63.20:818,63,0	1/1:1,49:50:99:1636,126,0	0/0:21,0:21:63.21:0,63,944	1/1:0,26:26:69.22:896,69,0	1/1:1,22:23:66.21:857,66,0	0/0:22,0:22:66.22:0,66,989	1/1:0,32:32:96.27:1215,96,0	1/1:0,29:29:78.23:1013,78,0	1/1:0,8:8:24.08:312,24,0
chr10	13920564	.	CT	C	7196.56	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=6.023;DP=468;FS=4.822;HRun=9;HaplotypeScore=49.2776;InbreedingCoeff=0.9402;MQ=75.78;MQ0=2;MQRankSum=-1.460;QD=21.87;ReadPosRankSum=2.375;VQSLOD=5.6500;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:84.23:0,84,956	1/1:0,5:5:14.96:129,15,0	0/0:25,0:15:23.35:0,23,194	0/0:23,0:16:29.16:0,29,308	1/1:3,26:29:74.97:676,75,0	0/0:22,0:22:51.15:0,51,588	0/0:5,0:5:12.04:0,12,139	1/1:2,27:29:81.02:736,81,0	1/1:1,10:11:27.01:247,27,0	1/1:0,20:20:57.03:522,57,0	1/1:2,12:14:36.02:329,36,0	0/0:4,0:4:12.03:0,12,136	1/1:1,8:9:15.01:137,15,0	1/1:1,8:9:21.01:192,21,0	1/1:2,14:16:36.02:330,36,0	1/1:1,14:15:36.02:330,36,0	1/1:5,32:37:81.03:741,81,0	1/1:2,23:25:63.02:572,63,0	1/1:3,18:21:54.01:488,54,0	1/1:2,9:11:27.01:247,27,0	1/1:1,1:2:3:27,3,0	0/0:6,0:6:9.03:0,9,104	1/1:3,7:10:18:165,18,0	1/1:2,7:9:18:165,18,0	0/0:24,0:24:54.16:0,54,623	1/1:5,23:28:68.96:615,69,0	1/1:4,18:22:42.01:384,42,0	1/1:1,6:7:18.01:165,18,0
chr10	13920839	.	G	GA	730.78	PASS	AB=0.937;AC=7;AF=0.125;AN=56;BaseQRankSum=-3.050;DP=521;FS=2.189;HRun=10;HaplotypeScore=57.6050;InbreedingCoeff=0.4793;MQ=62.09;MQ0=9;MQRankSum=0.135;QD=9.25;ReadPosRankSum=0.333;VQSLOD=2.1391;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:32:69.97:0,70,553	0/0:3,0:3:8.99:0,9,74	0/1:20,0:10:17.65:18,0,48	0/0:22,0:14:13.07:0,13,225	0/0:25,1:26:21.68:0,22,384	1/1:4,17:21:50.92:522,51,0	1/1:4,14:18:11.24:307,11,0	0/0:17,0:16:29.64:0,30,246	0/0:19,0:19:44.69:0,45,356	0/0:17,0:17:44.55:0,45,339	0/0:15,0:15:26.63:0,27,207	0/0:10,0:10:25.99:0,26,201	0/0:13,0:12:31.20:0,31,246	0/0:19,0:19:6.96:0,7,264	0/0:19,0:19:47.87:0,48,384	0/0:19,0:19:47.53:0,48,368	0/0:23,0:23:52.96:0,53,423	0/0:28,0:28:62.33:0,62,491	0/0:23,0:22:44.04:0,44,336	0/0:8,0:8:14.97:0,15,123	0/0:17,0:17:29.94:0,30,246	0/1:11,1:10:8.02:8,0,147	0/1:7,1:8:11.02:11,0,126	0/0:23,1:24:25.21:0,25,395	0/0:22,0:22:49.91:0,50,394	0/0:25,0:24:59.62:0,60,478	0/0:29,0:29:62.42:0,62,498	0/0:10,0:10:26.97:0,27,222
chr10	13921159	.	T	TA	182.61	PASS	AB=0.816;AC=3;AF=0.054;AN=56;BaseQRankSum=-2.115;DP=560;FS=0.837;HRun=12;HaplotypeScore=62.4005;InbreedingCoeff=-0.0524;MQ=62.90;MQ0=1;MQRankSum=0.267;QD=3.38;ReadPosRankSum=-2.027;VQSLOD=-0.5395;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:56.58:0,57,411	0/1:5,1:6:14.25:14,0,73	0/0:13,0:11:16.50:0,17,138	0/0:7,0:5:6.19:0,6,35	0/1:22,2:24:1.62:2,0,312	0/0:25,0:27:66.67:0,67,470	0/0:17,0:18:43.22:0,43,291	0/0:30,1:32:64.60:0,65,460	0/0:19,0:21:51.79:0,52,362	0/0:25,2:27:27.40:0,27,358	0/0:19,0:19:44.73:0,45,328	0/0:12,0:13:25.86:0,26,181	0/0:14,0:14:29.75:0,30,217	0/0:15,0:15:38.67:0,39,277	0/0:30,0:30:45.41:0,45,494	0/0:18,0:18:38.71:0,39,282	0/0:29,1:31:53.32:0,53,537	0/0:16,0:18:40.71:0,41,284	0/0:20,1:21:24.74:0,25,329	0/0:16,0:18:20.04:0,20,233	0/0:16,0:16:28.81:0,29,200	0/0:12,0:14:34.33:0,34,231	0/0:11,0:11:26.84:0,27,196	0/0:22,0:22:35.36:0,35,262	0/0:28,0:28:62.04:0,62,451	0/1:12,11:23:76.67:254,0,77	0/0:34,0:34:81.77:0,82,590	0/0:12,0:12:26.83:0,27,197
chr10	13923194	.	GT	G	3857.23	PASS	AB=0.696;AC=33;AF=0.589;AN=56;BaseQRankSum=0.041;DP=647;FS=8.005;HRun=15;HaplotypeScore=88.6319;InbreedingCoeff=0.3200;MQ=69.84;MQ0=6;MQRankSum=-0.655;QD=8.51;ReadPosRankSum=4.435;VQSLOD=2.7290;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:16,1:19:42.13:0,42,341	1/1:3,5:9:19.75:120,20,0	0/0:45,1:16:2.26:0,2,28	0/0:29,0:20:20.67:0,21,146	0/1:16,13:32:42.76:232,0,43	0/1:9,16:27:7.70:203,0,8	0/1:11,10:22:12.68:189,0,13	1/1:24,7:33:20.11:217,20,0	0/0:18,0:21:49.86:0,50,392	1/1:10,17:30:51.83:306,52,0	0/1:10,16:31:13.75:239,0,14	0/0:18,0:20:35.92:0,36,271	1/1:5,3:8:17.66:92,18,0	0/1:15,5:20:51.37:129,0,51	1/1:12,12:24:35.23:229,35,0	0/1:11,15:26:27.40:199,0,27	1/1:13,16:30:57.02:356,57,0	1/1:5,5:11:19.71:121,20,0	0/1:20,6:27:0.15:117,0,0	0/1:10,4:15:50.87:118,0,51	1/1:12,6:20:8.92:166,9,0	0/0:31,0:33:49.56:0,50,465	1/1:6,11:19:32.28:198,32,0	1/1:7,11:19:8.21:171,8,0	0/0:22,0:26:45.63:0,46,365	1/1:5,18:26:19.83:269,20,0	0/1:10,7:19:16.07:148,0,16	1/1:2,3:5:5.91:38,6,0
chr10	13924286	.	A	ATC	21109.23	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-12.854;DP=706;FS=4.943;HRun=0;HaplotypeScore=75.6698;InbreedingCoeff=0.9918;MQ=59.48;MQ0=1;MQRankSum=0.232;QD=42.73;ReadPosRankSum=1.792;VQSLOD=6.2371;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,141,1935	1/1:1,9:10:18.06:319,18,0	0/0:14,0:10:18.06:0,18,247	0/0:21,0:17:30.06:0,30,388	1/1:0,27:27:78.27:1382,78,0	0/0:14,0:14:39.13:0,39,535	0/0:29,0:29:81.25:0,81,1095	1/1:1,21:23:60.21:1056,60,0	1/1:2,30:32:81.28:1425,81,0	1/1:4,28:32:84.25:1431,84,0	1/1:1,11:12:30.10:525,30,0	0/0:41,0:41:99:0,117,1607	1/1:1,19:20:54.18:948,54,0	1/1:4,25:29:66.15:1170,66,0	1/1:2,36:38:99:1810,102,0	1/1:5,21:27:60.21:1062,60,0	1/1:0,24:24:57.20:1011,57,0	1/1:4,26:31:63.22:1105,63,0	1/1:6,15:21:48.16:841,48,0	1/1:1,11:12:30.10:532,30,0	1/1:3,36:39:87.30:1544,87,0	0/0:23,0:23:57.17:0,57,763	1/1:2,13:15:29.61:579,30,0	1/1:2,43:46:99:1863,105,0	0/0:16,0:16:42.14:0,42,576	1/1:0,21:22:63.19:1076,63,0	1/1:1,25:26:69.24:1216,69,0	1/1:1,7:8:12.04:213,12,0
chr10	13925336	.	T	TGC	48.64	PASS	AB=0.962;AC=7;AF=0.125;AN=56;BaseQRankSum=4.906;DP=612;FS=42.649;HRun=0;HaplotypeScore=123.8380;InbreedingCoeff=0.0260;MQ=47.24;MQ0=34;MQRankSum=-2.180;QD=0.39;ReadPosRankSum=1.085;VQSLOD=0.6974;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:30:52.55:0,53,427	0/0:10,0:10:5.95:0,6,44	0/0:16,0:3:8.96:0,9,70	0/0:20,0:2:5.68:0,6,38	0/1:12,0:11:17.34:17,0,54	0/0:30,0:26:38.86:0,39,308	0/0:34,0:32:50.31:0,50,400	0/0:12,0:10:14.88:0,15,107	0/0:26,0:25:25.85:0,26,374	0/0:17,0:14:13.19:0,13,175	0/0:8,0:8:11.89:0,12,91	0/0:34,0:33:74.59:0,75,615	1/1:17,0:17:0.12:1,0,0	0/0:25,1:24:29.79:0,30,215	0/0:26,1:24:35.32:0,35,280	0/1:24,0:24:8.35:19,0,8	0/0:27,0:27:36.43:0,36,284	0/1:13,2:11:70.89:102,0,71	0/0:12,0:9:13.80:0,14,84	0/0:14,0:14:29.84:0,30,231	0/0:53,0:47:24.98:0,25,351	0/0:25,0:25:44.91:0,45,391	0/0:9,0:9:8.98:0,9,72	0/1:36,1:36:3.60:4,0,376	0/0:17,0:17:23.97:0,24,199	0/0:26,0:25:54.44:0,54,404	0/1:19,1:20:15.76:16,0,189	0/0:12,0:10:12.96:0,13,93
chr10	13929393	.	T	TG	974.06	PASS	AB=0.775;AC=4;AF=0.071;AN=56;BaseQRankSum=-5.950;DP=462;FS=1.386;HRun=8;HaplotypeScore=52.0124;InbreedingCoeff=0.6597;MQ=69.58;MQ0=0;MQRankSum=-0.589;QD=17.71;ReadPosRankSum=1.524;VQSLOD=3.4545;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:69.79:0,70,653	0/0:9,0:9:24.01:0,24,219	0/0:11,0:11:18:0,18,164	0/0:7,0:7:17.86:0,18,137	0/0:7,0:7:21.01:0,21,192	0/1:2,9:11:0.30:248,0,0	1/1:6,27:33:72.21:831,72,0	0/0:15,0:15:30:0,30,270	0/0:8,0:8:18:0,18,165	0/0:20,0:20:42:0,42,382	0/0:5,0:5:11.97:0,12,102	0/0:22,0:22:63.02:0,63,571	0/0:16,0:16:47.04:0,47,408	0/0:21,0:21:57.01:0,57,516	0/0:25,0:25:72.02:0,72,654	0/0:22,0:22:57.01:0,57,522	0/0:29,0:29:81.04:0,81,741	0/0:24,1:25:31.42:0,31,542	0/0:15,0:16:38.03:0,38,330	0/1:11,0:11:1.29:1,0,144	0/0:35,0:36:89.01:0,89,788	0/0:17,0:17:48.01:0,48,434	0/0:5,0:5:12.01:0,12,110	0/0:18,0:18:48.03:0,48,439	0/0:8,0:8:24.01:0,24,220	0/0:16,0:16:42.02:0,42,384	0/0:12,0:13:29.04:0,29,253	0/0:4,0:4:10.54:0,11,80
chr10	13930957	.	AGTACCT	A	5618.09	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=19.370;DP=621;FS=0.639;HRun=0;HaplotypeScore=270.7614;InbreedingCoeff=0.9939;MQ=82.80;MQ0=0;MQRankSum=-19.395;QD=15.23;ReadPosRankSum=1.527;VQSLOD=3.4415;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:64,0:64:99:0,184,6596	1/1:13,1:14:29.68:209,30,0	0/0:27,0:27:66.20:0,66,2098	0/0:27,0:27:19.55:0,20,2094	1/1:15,1:16:27.16:211,27,0	0/0:34,0:34:99:0,102,3666	0/0:34,0:34:99:0,102,3671	1/1:17,3:20:44.53:420,45,0	1/1:19,4:23:43.55:510,44,0	1/1:15,2:17:41.19:263,41,0	1/1:11,0:11:15.28:127,15,0	0/0:30,0:30:87.27:0,87,3000	1/1:16,0:16:27.23:129,27,0	1/1:26,1:27:49.01:331,49,0	1/1:22,2:24:49.11:372,49,0	1/1:30,0:30:62.33:307,62,0	1/1:14,2:16:27.74:258,28,0	1/1:16,0:16:36.25:239,36,0	1/1:14,2:16:27.54:324,28,0	1/1:13,0:13:22.94:136,23,0	1/1:18,2:20:33.12:336,33,0	0/0:15,0:15:45.15:0,45,1632	1/1:14,0:14:18.28:127,18,0	1/1:18,1:19:33.47:306,33,0	0/0:21,0:21:60.18:0,60,2111	1/1:20,1:21:48.21:277,48,0	1/1:18,0:18:39.63:275,40,0	1/1:16,2:18:47.44:463,47,0
chr10	13930960	.	AC	A	11072.48	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=19.703;DP=581;FS=0.000;HRun=2;HaplotypeScore=184.1124;InbreedingCoeff=0.9963;MQ=83.48;MQ0=0;MQRankSum=-19.691;QD=32.66;ReadPosRankSum=1.953;VQSLOD=4.2919;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:62,0:62:99:0,184,2703	1/1:1,12:13:39.12:479,39,0	0/0:23,0:23:63.19:0,63,916	0/0:25,1:26:14.40:0,14,846	1/1:1,14:15:36.11:441,36,0	0/0:34,0:34:99:0,102,1517	0/0:34,0:34:99:0,99,1484	1/1:3,13:16:47.59:524,48,0	1/1:5,15:20:53.67:573,54,0	1/1:2,16:18:47.98:570,48,0	1/1:0,8:8:24.08:297,24,0	0/0:27,0:27:81.27:0,81,1211	1/1:0,16:16:45.14:556,45,0	1/1:2,23:25:69.05:829,69,0	1/1:2,21:23:66.01:774,66,0	1/1:0,28:28:81.25:1001,81,0	1/1:2,13:15:38.16:429,38,0	1/1:0,14:14:33.10:408,33,0	1/1:2,15:17:47.76:536,48,0	1/1:1,10:11:30.09:370,30,0	1/1:2,13:15:38.96:444,39,0	0/0:16,0:16:48.14:0,48,696	1/1:0,13:13:33.10:407,33,0	1/1:1,17:18:45.06:517,45,0	0/0:20,0:20:60.19:0,60,880	1/1:1,18:19:57:670,57,0	1/1:0,17:17:51.16:631,51,0	1/1:2,16:18:53.64:618,54,0
chr10	13935073	.	ATT	A	8763.95	PASS	AB=0.556;AC=41;AF=0.732;AN=56;BaseQRankSum=1.393;DP=558;FS=2.445;HRun=12;HaplotypeScore=89.0384;InbreedingCoeff=0.9093;MQ=68.66;MQ0=0;MQRankSum=-5.570;QD=20.87;ReadPosRankSum=1.803;VQSLOD=4.6442;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:37:99:0,102,1399	1/1:0,7:7:18.04:183,18,0	0/0:20,0:15:27.09:0,27,367	0/0:23,0:20:35.46:0,35,373	1/1:5,18:23:41.92:427,42,0	0/0:4,1:19:3.42:0,3,90	0/1:3,1:15:0.05:0,0,66	1/1:3,21:24:60:578,60,0	1/1:4,8:12:24.01:243,24,0	1/1:5,9:14:7.18:307,7,0	1/1:2,17:19:42.04:427,42,0	0/0:12,0:13:26.58:0,27,367	1/1:1,14:15:42.07:426,42,0	1/1:5,17:22:42.04:427,42,0	1/1:9,16:25:54.05:549,54,0	1/1:5,18:23:60.09:609,60,0	1/1:4,24:28:66.11:671,66,0	1/1:3,21:24:48.10:488,48,0	1/1:10,11:22:47.75:446,48,0	1/1:4,12:16:30.01:305,30,0	1/1:5,26:30:57.09:580,57,0	0/0:13,0:14:36.11:0,36,502	1/1:3,11:14:30.03:305,30,0	1/1:3,23:26:48.05:488,48,0	0/0:12,0:12:33.10:0,33,470	1/1:3,20:23:59.71:573,60,0	1/1:5,23:28:50.75:518,51,0	1/1:1,8:9:21.05:214,21,0
chr10	13935123	.	AGTGT	A	979.75	PASS	AB=0.970;AC=31;AF=0.738;AN=42;BaseQRankSum=0.190;DP=609;FS=21.515;HRun=0;HaplotypeScore=121.3872;InbreedingCoeff=0.3713;MQ=52.99;MQ0=34;MQRankSum=0.843;QD=3.01;ReadPosRankSum=1.034;VQSLOD=0.6029;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:2.74:0,3,12	1/1:9,0:9:2.96:19,3,0	./.	./.	1/1:24,2:24:6.02:91,6,0	1/1:14,0:13:2.46:27,2,0	0/0:20,0:19:3.01:0,3,47	0/0:29,0:29:0.47:0,0,1	1/1:11,1:12:2.87:45,3,0	1/1:25,0:22:5.94:42,6,0	1/1:14,0:14:2.98:22,3,0	0/0:16,0:18:5.67:0,6,36	1/1:15,0:13:3.01:46,3,0	./.	1/1:27,1:27:6.49:92,6,0	1/1:24,1:24:9.03:130,9,0	0/1:31,1:30:4.95:80,0,5	1/1:28,1:27:9.02:117,9,0	1/1:18,0:15:3:28,3,0	./.	./.	0/0:20,0:20:14.61:0,15,143	1/1:9,1:10:3.01:46,3,0	1/1:28,3:26:9.03:136,9,0	1/1:13,0:12:0.46:1,0,0	./.	1/1:23,0:21:12.88:180,13,0	./.
chr10	13935207	.	G	GTGGATCACTTTGAAC	53244.16	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-1.632;DP=614;FS=0.373;HRun=0;HaplotypeScore=216.5558;InbreedingCoeff=0.9986;MQ=76.27;MQ0=0;MQRankSum=-14.460;QD=115.50;ReadPosRankSum=-1.925;VQSLOD=3.9812;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:75.17:0,75,2736	1/1:5,8:14:39.12:2383,39,0	0/0:16,0:14:38.68:0,39,926	0/0:32,0:30:56.82:0,57,1515	1/1:8,8:19:29.89:1477,30,0	0/0:19,0:18:51.15:0,51,1946	0/0:14,0:14:38.93:0,39,1373	1/1:42,0:42:99:3543,117,0	1/1:8,13:23:51.17:2996,51,0	1/1:9,14:24:54.18:2830,54,0	1/1:8,10:20:35.79:1655,36,0	0/0:16,0:16:45.15:0,45,1834	1/1:11,4:15:42.03:2358,42,0	1/1:4,12:17:36.12:2321,36,0	1/1:12,24:37:84.29:5297,84,0	1/1:10,25:39:72.23:4596,72,0	1/1:9,10:19:48.03:2485,48,0	1/1:11,1:12:23.89:377,24,0	1/1:11,9:24:60.16:2612,60,0	1/1:6,16:26:35.05:2091,35,0	1/1:23,5:27:53.82:1803,54,0	0/0:19,0:19:51.10:0,51,1765	1/1:2,7:11:27.09:1819,27,0	1/1:19,7:26:42:2105,42,0	0/0:9,0:9:24.08:0,24,953	1/1:10,20:31:87.29:5273,87,0	1/1:17,6:24:69.03:3557,69,0	1/1:2,7:9:24.08:1668,24,0
chr10	13935653	.	G	GGGGGGGGGGA	7122.26	PASS	AB=0.983;AC=38;AF=0.704;AN=54;BaseQRankSum=1.636;DP=375;FS=2.253;HRun=0;HaplotypeScore=133.5383;InbreedingCoeff=0.6234;MQ=62.85;MQ0=15;MQRankSum=-8.634;QD=33.60;ReadPosRankSum=-4.508;VQSLOD=3.7987;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:32:72.23:0,72,1946	1/1:5,0:5:12.04:347,12,0	0/0:28,0:9:18:0,18,389	0/0:28,0:17:51.01:0,51,1305	./.	0/1:14,0:14:90.85:91,0,186	0/1:28,0:29:99:152,0,551	1/1:6,9:16:41.45:971,41,0	1/1:7,0:7:16.80:383,17,0	1/1:11,0:11:24.08:653,24,0	1/1:3,0:3:2.05:13,2,0	0/0:23,0:24:66.21:0,66,1987	1/1:10,0:10:12:196,12,0	0/0:5,0:5:2.22:0,2,7	1/1:10,0:10:24.04:440,24,0	1/1:12,0:12:33.02:605,33,0	1/1:12,1:12:24.04:588,24,0	1/1:2,0:2:5.51:99,6,0	1/1:13,0:12:24.95:550,25,0	1/1:3,0:3:3.01:79,3,0	1/1:11,0:10:4.54:149,5,0	0/0:19,0:19:39.59:0,40,1086	1/1:7,0:7:3.04:57,3,0	1/1:14,0:14:8.99:216,9,0	0/0:12,0:13:33.11:0,33,986	1/1:12,0:10:21.07:606,21,0	1/1:17,0:17:39.08:911,39,0	1/1:2,0:2:2.88:15,3,0
chr10	13935717	.	A	AAAG	16636.92	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=4.030;DP=498;FS=32.466;HRun=0;HaplotypeScore=111.6890;InbreedingCoeff=0.9836;MQ=66.54;MQ0=0;MQRankSum=-6.285;QD=47.00;ReadPosRankSum=0.849;VQSLOD=3.6878;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:93.02:0,93,1302	1/1:2,4:7:12.04:259,12,0	0/0:26,0:24:42.04:0,42,732	0/0:32,0:26:37.59:0,38,735	1/1:4,19:23:42.14:860,42,0	1/1:3,19:23:48.16:1017,48,0	1/1:3,26:29:78.27:1687,78,0	1/1:4,11:15:33.03:587,33,0	1/1:2,8:10:24.08:519,24,0	1/1:4,14:19:48.14:947,48,0	1/1:0,13:13:30.10:605,30,0	0/0:23,0:23:57.16:0,57,865	1/1:3,12:16:36.12:761,36,0	1/1:1,11:12:29.80:622,30,0	1/1:3,16:19:45.15:973,45,0	1/1:4,13:17:36.12:762,36,0	1/1:6,13:19:30.10:648,30,0	1/1:2,7:9:24.08:512,24,0	1/1:0,7:7:21.07:454,21,0	1/1:3,12:15:39.09:748,39,0	1/1:1,9:10:18.06:334,18,0	0/0:18,0:18:51.15:0,51,738	1/1:2,12:14:30.10:648,30,0	1/1:3,20:24:51.45:1091,51,0	0/0:10,0:10:27.01:0,27,368	1/1:4,20:23:63.22:1327,63,0	1/1:3,19:23:48.16:1028,48,0	1/1:1,4:5:12.04:249,12,0
chr10	13935998	.	CT	C	1990.28	PASS	AB=1.000;AC=39;AF=0.696;AN=56;BaseQRankSum=1.800;DP=338;FS=2.561;HRun=3;HaplotypeScore=46.1688;InbreedingCoeff=0.7632;MQ=66.66;MQ0=9;MQRankSum=-1.693;QD=8.81;ReadPosRankSum=1.187;VQSLOD=1.0844;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:65.79:0,66,653	1/1:6,1:7:19.85:124,20,0	0/0:15,0:9:6.82:0,7,65	0/0:10,0:7:6.59:0,7,36	1/1:11,0:11:14.45:97,14,0	0/0:22,0:22:49.69:0,50,495	0/0:11,0:11:29.82:0,30,309	1/1:35,0:33:62.35:427,62,0	1/1:7,1:8:1.77:5,2,0	1/1:8,0:7:19.88:128,20,0	1/1:12,0:12:23.26:141,23,0	0/0:7,0:7:15.04:0,15,188	1/1:7,0:6:10.93:76,11,0	1/1:6,0:6:4.95:71,5,0	1/1:18,0:18:23.62:183,24,0	1/1:12,0:11:7.83:53,8,0	1/1:23,0:21:26.90:152,27,0	0/1:5,0:5:2.82:7,0,3	1/1:12,0:12:13.23:92,13,0	1/1:10,0:10:13.83:98,14,0	1/1:3,0:3:1.30:21,1,0	0/0:3,0:3:3.01:0,3,42	1/1:6,1:6:13.80:87,14,0	1/1:4,1:5:11.29:67,11,0	0/0:15,0:14:22.08:0,22,280	1/1:17,0:17:27.59:195,28,0	1/1:11,0:10:13.09:65,13,0	1/1:9,0:7:11.19:91,11,0
chr10	13936000	.	T	TA	690.89	PASS	AB=0.766;AC=25;AF=0.446;AN=56;BaseQRankSum=4.222;DP=368;FS=15.721;HRun=0;HaplotypeScore=59.3546;InbreedingCoeff=0.2179;MQ=64.99;MQ0=9;MQRankSum=1.840;QD=2.87;ReadPosRankSum=2.178;VQSLOD=1.3803;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:72.12:0,72,854	0/1:2,6:8:0.12:56,0,0	0/0:16,0:8:13.94:0,14,126	0/0:9,0:6:5.52:0,6,45	0/1:6,7:13:14.69:32,0,15	0/0:22,0:22:54.13:0,54,701	0/0:11,0:11:30.07:0,30,368	1/1:27,5:31:5.67:139,6,0	1/1:5,6:11:1.92:19,2,0	1/1:5,8:12:11.74:87,12,0	0/1:11,2:13:25.19:25,0,29	0/0:7,0:7:15.05:0,15,204	1/1:3,4:7:8.67:51,9,0	0/1:6,1:7:7.56:27,0,8	0/1:16,0:17:1.76:2,0,8	0/1:5,8:12:12.83:13,0,14	1/1:6,15:22:17.87:167,18,0	0/1:3,1:6:5.17:5,0,18	0/1:11,0:11:6.69:11,0,7	0/1:7,8:15:2.34:30,0,2	0/0:3,0:3:3.81:0,4,21	0/0:3,0:3:3.01:0,3,42	0/1:8,2:9:2.60:16,0,3	1/1:2,4:6:5.77:51,6,0	0/0:16,0:15:29.54:0,30,397	0/1:11,6:18:12.35:34,0,12	1/1:4,11:14:8.27:94,8,0	0/0:9,0:7:0.42:0,0,1
chr10	13937113	.	TCAAAAAA	T	12647.66	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=11.497;DP=568;FS=2.749;HRun=0;HaplotypeScore=128.8650;InbreedingCoeff=0.9119;MQ=54.42;MQ0=7;MQRankSum=-7.991;QD=33.37;ReadPosRankSum=-0.686;VQSLOD=4.6526;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:78.19:0,78,2443	1/1:1,7:8:18.02:338,18,0	0/0:33,0:9:14.59:0,15,341	0/0:26,0:9:16.21:0,16,346	1/1:9,25:34:72.21:1380,72,0	0/0:25,0:25:57.18:0,57,1839	0/0:13,0:13:18.03:0,18,557	1/1:6,14:19:39.11:674,39,0	1/1:3,17:19:33.11:774,33,0	1/1:11,13:23:42.10:772,42,0	1/1:4,16:20:48.16:1092,48,0	0/0:16,0:16:45.15:0,45,1480	1/1:5,9:14:30.10:608,30,0	1/1:4,8:12:8.95:195,9,0	1/1:5,10:15:18.06:422,18,0	1/1:1,14:15:21.07:458,21,0	1/1:10,19:29:30.10:671,30,0	1/1:6,9:14:9.03:194,9,0	1/1:5,8:13:24.05:412,24,0	1/1:5,23:28:64.06:1350,64,0	1/1:5,5:10:3.01:71,3,0	0/0:20,0:20:57.19:0,57,1885	1/1:4,18:22:32.53:654,33,0	1/1:2,8:10:15.05:352,15,0	0/0:23,0:23:54.15:0,54,1506	1/1:6,26:31:72.19:1377,72,0	1/1:10,13:22:36.12:783,36,0	1/1:9,6:15:3.01:70,3,0
chr10	13937121	.	CAAAAAACA	C	6015.87	PASS	AB=0.983;AC=25;AF=0.446;AN=56;BaseQRankSum=15.391;DP=567;FS=10.712;HRun=0;HaplotypeScore=160.3764;InbreedingCoeff=-0.1075;MQ=54.57;MQ0=12;MQRankSum=-7.733;QD=15.83;ReadPosRankSum=5.172;VQSLOD=3.1694;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:78.19:0,78,2780	1/1:8,0:8:16.56:173,17,0	0/0:31,0:8:4.61:0,5,402	0/0:25,0:10:21.74:0,22,458	0/1:30,1:31:20.81:610,0,21	0/0:24,0:24:66.22:0,66,2310	0/0:11,0:11:21.04:0,21,691	0/1:21,0:20:54.32:234,0,54	1/1:18,0:17:2.95:376,3,0	0/1:23,0:22:18:356,0,18	0/1:23,0:23:35.63:506,0,36	0/0:17,0:18:51.17:0,51,1812	0/1:12,2:14:0.21:383,0,0	0/1:13,1:14:75.11:136,0,75	0/1:12,0:12:9.80:202,0,10	0/1:17,0:17:35.11:217,0,35	0/1:30,1:31:99:345,0,208	0/1:17,0:16:76.87:82,0,77	0/1:19,0:16:66.97:167,0,67	0/1:27,0:27:28.40:600,0,28	0/1:12,0:12:22.39:22,0,104	0/0:21,0:21:60.20:0,60,2192	0/1:24,0:24:99:280,0,118	0/1:12,0:12:45.11:165,0,45	0/0:26,0:25:66.19:0,66,1953	1/1:28,0:27:69.64:661,70,0	1/1:17,1:18:36.08:464,36,0	1/1:11,0:11:3.01:37,3,0
chr10	13937122	.	AAAAAAC	A	7603.47	PASS	AB=0.988;AC=26;AF=0.464;AN=56;BaseQRankSum=15.403;DP=567;FS=9.520;HRun=0;HaplotypeScore=136.9938;InbreedingCoeff=-0.0273;MQ=55.57;MQ0=12;MQRankSum=-6.830;QD=19.96;ReadPosRankSum=5.863;VQSLOD=3.7240;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:78.16:0,78,2213	1/1:7,0:7:17.75:215,18,0	0/0:30,0:8:9.56:0,10,348	0/0:25,0:11:5.10:0,5,317	1/1:31,0:31:7.24:762,7,0	0/0:24,0:24:66.19:0,66,1868	0/0:11,0:11:21.04:0,21,543	0/1:22,0:21:40.63:329,0,41	1/1:18,0:17:11.73:479,12,0	0/1:20,1:20:39.91:485,0,40	0/1:23,0:23:15.60:642,0,16	0/0:18,0:18:51.16:0,51,1444	0/1:14,1:15:9.77:420,0,10	0/1:16,0:16:98.10:116,0,98	0/1:13,0:13:24.73:251,0,25	0/1:16,1:17:21.54:315,0,22	0/1:31,0:31:99:387,0,162	0/1:17,0:16:59.74:100,0,60	0/1:20,0:17:62.46:263,0,62	0/1:26,0:26:0.88:785,0,1	0/1:12,0:13:43.70:44,0,58	0/0:21,0:21:63.13:0,63,1729	0/1:24,0:24:75.15:361,0,75	0/1:12,0:12:48.28:205,0,48	0/0:27,0:26:69.15:0,69,1642	1/1:27,0:26:71.19:836,71,0	1/1:16,1:17:36.12:563,36,0	1/1:11,0:11:3.01:46,3,0
chr10	13938192	.	TAA	T	5162.16	PASS	AB=0.636;AC=37;AF=0.661;AN=56;BaseQRankSum=-2.291;DP=446;FS=11.675;HRun=14;HaplotypeScore=61.1933;InbreedingCoeff=0.8114;MQ=59.16;MQ0=6;MQRankSum=1.198;QD=15.36;ReadPosRankSum=2.708;VQSLOD=2.6936;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:56.88:0,57,676	1/1:1,12:13:30.01:278,30,0	0/0:7,0:5:8.98:0,9,82	0/0:8,0:3:5.91:0,6,38	1/1:8,20:29:56.64:511,57,0	0/0:5,1:16:6.65:0,7,119	0/0:3,0:7:12.66:0,13,53	1/1:9,13:21:36.08:310,36,0	1/1:1,0:9:16.58:75,17,0	1/1:10,13:22:26.88:296,27,0	1/1:2,12:16:29.91:277,30,0	0/0:10,0:10:15.02:0,15,175	1/1:4,5:10:17.71:151,18,0	0/1:6,8:14:10.03:47,0,10	1/1:3,11:15:26.99:250,27,0	1/1:7,10:17:17.75:212,18,0	0/0:3,0:22:40.42:0,40,154	1/1:7,22:28:53.96:500,54,0	1/1:7,6:13:3.35:158,3,0	1/1:2,11:14:26.85:295,27,0	1/1:0,6:6:12.01:111,12,0	0/0:2,0:2:2.99:0,3,24	1/1:2,8:11:17.89:213,18,0	1/1:4,5:9:11.98:111,12,0	0/0:12,0:13:36.02:0,36,442	1/1:9,18:27:24.21:386,24,0	1/1:5,22:28:44.84:464,45,0	1/1:6,21:27:50.72:519,51,0
chr10	13942611	.	G	GA	14645.09	PASS	AB=1.000;AC=42;AF=0.750;AN=56;BaseQRankSum=-13.206;DP=599;FS=1.695;HRun=5;HaplotypeScore=53.8732;InbreedingCoeff=0.8244;MQ=78.80;MQ0=0;MQRankSum=-2.791;QD=31.91;ReadPosRankSum=1.532;VQSLOD=5.4603;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:84.16:0,84,878	1/1:0,8:8:21.07:276,21,0	0/1:17,0:16:7.35:7,0,342	0/1:14,0:13:31.47:31,0,188	1/1:2,24:26:69.22:906,69,0	0/0:31,0:31:84.21:0,84,903	0/0:28,0:28:75.17:0,75,798	1/1:0,20:20:60.20:790,60,0	1/1:2,20:22:57.19:750,57,0	1/1:1,17:18:49.40:634,49,0	1/1:1,14:15:45.06:553,45,0	0/0:23,0:23:63.16:0,63,677	1/1:1,13:14:36.11:463,36,0	1/1:4,21:25:60.20:790,60,0	1/1:3,25:28:66.21:868,66,0	1/1:4,25:29:63.20:829,63,0	1/1:3,35:38:96.18:1239,96,0	1/1:2,29:31:84.27:1105,84,0	1/1:3,20:23:63.18:803,63,0	1/1:2,11:13:33.07:416,33,0	1/1:0,28:28:75.24:987,75,0	0/0:10,0:10:27.07:0,27,290	1/1:1,14:15:39.13:513,39,0	1/1:1,24:25:69.22:908,69,0	0/0:15,0:15:39.10:0,39,419	1/1:1,21:22:63.20:828,63,0	1/1:0,17:17:48.16:632,48,0	1/1:0,10:10:24.08:316,24,0
chr10	13942774	.	C	CG	2170.82	PASS	AB=1.000;AC=38;AF=0.704;AN=54;BaseQRankSum=0.048;DP=274;FS=9.534;HRun=8;HaplotypeScore=47.0065;InbreedingCoeff=0.7167;MQ=76.55;MQ0=1;MQRankSum=0.102;QD=11.73;ReadPosRankSum=-2.214;VQSLOD=1.1121;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:22:19.58:0,20,337	./.	0/0:8,0:8:11.82:0,12,121	0/0:6,0:6:0.85:0,1,47	1/1:5,1:6:3.01:35,3,0	0/0:7,0:7:11.99:0,12,110	0/0:25,0:25:50.91:0,51,452	1/1:1,2:3:6.02:69,6,0	1/1:5,5:10:21.03:216,21,0	1/1:1,5:6:15.04:172,15,0	0/1:3,0:3:0:0,0,0	0/1:13,0:13:0.44:0,0,167	1/1:3,2:5:9:94,9,0	1/1:6,4:10:18.92:192,19,0	1/1:4,0:4:9:81,9,0	1/1:3,8:11:12.04:139,12,0	1/1:6,17:23:18.05:208,18,0	1/1:8,2:10:18.91:182,19,0	1/1:3,3:6:18.03:189,18,0	1/1:7,0:7:3:25,3,0	1/1:8,20:28:27.94:314,28,0	0/0:7,0:7:14.96:0,15,125	1/1:5,0:5:5.67:36,6,0	1/1:3,10:13:15.04:173,15,0	0/0:11,0:11:11.74:0,12,110	1/1:6,3:9:8.15:74,8,0	1/1:5,2:7:12.28:103,12,0	1/1:6,0:6:7.54:50,8,0
chr10	13945587	.	TTGTGTGTGTGTGTGTGTGTGTG	T	9728.54	PASS	AB=0.784;AC=36;AF=0.667;AN=54;BaseQRankSum=7.241;DP=635;FS=42.272;HRun=0;HaplotypeScore=279.3622;InbreedingCoeff=0.4754;MQ=58.00;MQ0=22;MQRankSum=-4.672;QD=21.96;ReadPosRankSum=1.694;VQSLOD=2.6540;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:29:30.10:0,30,2134	0/1:7,4:11:6.01:339,0,6	0/0:28,0:15:6.01:0,6,67	0/0:35,0:18:3.01:0,3,98	1/1:9,13:21:8.99:353,9,0	1/1:9,0:21:7.58:311,8,0	0/0:28,0:27:3.01:0,3,126	1/1:13,11:24:9.19:305,9,0	1/1:9,14:23:8.04:669,8,0	1/1:9,12:20:14.85:411,15,0	1/1:4,6:9:6.02:231,6,0	0/0:25,0:25:33.53:0,34,2217	0/1:13,9:22:34.12:504,0,34	1/1:4,11:16:12.03:675,12,0	1/1:13,16:29:21.07:1216,21,0	1/1:10,22:32:12.25:1717,12,0	0/1:20,13:31:82.08:340,0,82	1/1:11,13:25:9.03:501,9,0	1/1:14,4:17:11.58:404,12,0	1/1:15,0:15:11.04:69,11,0	0/1:41,0:41:9.90:101,0,10	0/0:14,0:16:25.33:0,25,1620	1/1:7,5:12:3.48:160,3,0	1/1:9,22:31:6.49:348,6,0	0/0:19,0:19:24.05:0,24,1195	1/1:17,0:16:5.80:32,6,0	1/1:9,8:17:18.06:1042,18,0	./.
chr10	13945833	.	C	CA	17835.71	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-12.473;DP=625;FS=2.395;HRun=1;HaplotypeScore=68.2744;InbreedingCoeff=0.9955;MQ=89.33;MQ0=0;MQRankSum=-5.226;QD=39.99;ReadPosRankSum=2.545;VQSLOD=5.6234;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:75.22:0,75,958	1/1:1,7:8:18.06:270,18,0	0/0:29,1:30:39.61:0,40,975	0/0:18,0:18:29.44:0,29,434	1/1:2,16:18:48.16:719,48,0	0/0:17,0:17:51.17:0,51,661	0/0:34,0:34:96.31:0,96,1246	1/1:1,26:27:78.24:1123,78,0	1/1:0,26:26:75.25:1122,75,0	1/1:1,27:28:81.25:1192,81,0	1/1:4,12:16:26.81:405,27,0	0/0:31,0:31:87.27:0,87,1116	1/1:1,28:29:81.27:1207,81,0	1/1:1,18:19:51.17:763,51,0	1/1:4,27:31:72.24:1078,72,0	1/1:1,30:31:87.29:1304,87,0	1/1:3,26:29:75.23:1102,75,0	1/1:0,25:25:72.24:1079,72,0	1/1:4,16:20:51.17:741,51,0	1/1:0,18:18:51.13:739,51,0	1/1:1,31:32:90.30:1349,90,0	0/0:15,0:15:36.12:0,36,467	1/1:0,9:9:15.52:225,16,0	1/1:0,23:23:69.23:1034,69,0	0/0:9,0:9:24.08:0,24,311	1/1:0,17:17:51.17:764,51,0	1/1:0,27:27:78.26:1169,78,0	1/1:1,12:13:30.10:450,30,0
chr10	13950530	.	AC	A	1151.58	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.835;DP=606;FS=15.903;HRun=2;HaplotypeScore=70.4390;InbreedingCoeff=0.9414;MQ=68.31;MQ0=1;MQRankSum=1.913;QD=28.79;ReadPosRankSum=-1.710;VQSLOD=1.7469;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,160,2382	0/0:7,0:7:15.05:0,15,225	0/0:10,0:9:7.15:0,7,157	0/0:8,0:8:14.31:0,14,145	0/0:22,0:22:63.21:0,63,943	1/1:1,13:14:34.35:412,34,0	1/1:0,26:26:69.22:861,69,0	0/0:28,0:27:75.25:0,75,1115	0/0:13,0:13:36.12:0,36,536	0/0:20,0:20:60.20:0,60,899	0/0:19,0:19:54.17:0,54,790	0/0:16,0:16:48.16:0,48,720	0/0:15,0:15:42.14:0,42,629	0/0:14,0:13:39.13:0,39,584	0/0:28,0:28:81.23:0,81,1189	0/0:32,0:31:87.29:0,87,1303	0/0:33,0:32:90.22:0,90,1291	0/0:20,0:20:48.16:0,48,716	0/0:21,0:17:51.17:0,51,764	0/0:28,0:28:84.28:0,84,1252	0/0:28,0:28:75.25:0,75,1123	0/0:22,0:22:63.21:0,63,943	0/0:24,0:24:63.20:0,63,923	0/0:25,0:24:63.17:0,63,900	0/0:14,0:14:42.14:0,42,629	0/0:22,0:22:66.22:0,66,989	0/0:31,0:30:84.28:0,84,1259	0/0:11,0:11:33.11:0,33,494
chr10	13950590	.	T	TTTTTTTTTC	13393.06	PASS	AB=0.873;AC=37;AF=0.661;AN=56;BaseQRankSum=6.802;DP=565;FS=76.187;HRun=0;HaplotypeScore=180.2820;InbreedingCoeff=0.1547;MQ=60.50;MQ0=8;MQRankSum=-7.892;QD=29.05;ReadPosRankSum=-0.398;VQSLOD=1.7222;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:56:99:0,134,2174	1/1:4,3:10:0.07:375,0,0	0/1:30,0:14:17.17:17,0,176	0/1:29,0:14:18.23:18,0,114	0/1:16,1:22:0.91:303,0,1	0/1:11,0:11:11.45:351,0,11	1/1:12,0:8:11.94:367,12,0	1/1:14,3:29:55.87:1472,56,0	0/1:9,1:14:20.55:152,0,21	1/1:23,0:22:29.37:1285,29,0	0/1:16,0:16:2.41:694,0,2	0/0:13,0:13:30.11:0,30,448	0/1:12,0:11:16.98:417,0,17	1/1:14,0:13:5.28:529,5,0	1/1:15,0:15:22.50:733,22,0	0/1:14,4:22:2.63:778,0,3	1/1:13,2:20:10.93:503,11,0	1/1:8,2:12:8.92:308,9,0	1/1:18,0:12:9.36:493,9,0	0/1:12,0:23:2.71:608,0,3	1/1:10,0:10:17.96:433,18,0	0/0:20,0:20:46.04:0,46,677	0/1:26,0:26:19.25:895,0,19	1/1:20,0:18:19.73:484,20,0	0/0:14,0:14:39.51:0,40,601	1/1:22,0:21:23.18:1078,23,0	0/1:19,4:26:23.75:642,0,24	1/1:10,0:8:15.12:458,15,0
chr10	13950600	.	TC	T	2189.76	PASS	AB=1.000;AC=45;AF=0.804;AN=56;BaseQRankSum=3.735;DP=430;FS=1.743;HRun=1;HaplotypeScore=61.1848;InbreedingCoeff=0.7815;MQ=62.22;MQ0=14;MQRankSum=-7.556;QD=8.23;ReadPosRankSum=-2.640;VQSLOD=-0.0577;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:49:58.74:0,59,918	1/1:7,0:6:7.36:25,7,0	0/0:42,0:14:29.28:0,29,197	0/0:37,2:13:9.39:0,9,107	1/1:11,0:10:12.57:77,13,0	1/1:12,0:11:16.32:100,16,0	1/1:10,0:9:14.47:77,14,0	1/1:23,1:21:51.05:293,51,0	1/1:7,1:8:10.53:63,11,0	1/1:16,0:15:29.41:153,29,0	1/1:15,0:14:25.85:161,26,0	0/1:11,0:11:10.21:10,0,84	1/1:5,0:5:10.86:67,11,0	1/1:13,0:13:32.05:219,32,0	1/1:8,0:8:16.82:93,17,0	1/1:15,0:14:24.43:147,24,0	1/1:12,0:12:8.53:50,9,0	1/1:9,0:9:11.39:67,11,0	1/1:10,0:8:17.41:84,17,0	1/1:14,0:13:8.51:37,9,0	1/1:5,0:5:9.68:52,10,0	0/0:14,0:15:34.24:0,34,307	1/1:14,0:14:24.98:145,25,0	1/1:15,0:14:24.67:162,25,0	0/0:14,0:14:25.83:0,26,225	1/1:8,2:9:23.27:140,23,0	1/1:15,0:14:19.73:122,20,0	1/1:6,1:5:7.77:27,8,0
chr10	13951077	.	GA	G	317.92	PASS	AB=0.936;AC=8;AF=0.143;AN=56;BaseQRankSum=3.058;DP=483;FS=10.280;HRun=11;HaplotypeScore=105.2247;InbreedingCoeff=0.4426;MQ=65.63;MQ0=10;MQRankSum=-0.637;QD=2.34;ReadPosRankSum=0.110;VQSLOD=-0.3991;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:78:0,78,797	0/0:9,0:9:21.04:0,21,216	0/1:37,1:16:1.32:1,0,147	0/1:38,1:18:19.20:19,0,28	0/0:22,0:20:39.09:0,39,406	1/1:3,10:13:32.94:270,33,0	1/1:5,5:9:17.96:147,18,0	0/0:34,0:34:81.80:0,82,807	0/0:8,0:8:18.04:0,18,190	0/0:22,0:20:48.99:0,49,506	0/1:15,2:18:7.39:7,0,310	0/0:11,0:11:24.04:0,24,242	0/0:8,0:8:11.80:0,12,111	0/0:8,0:8:21.05:0,21,217	0/0:14,0:14:33.08:0,33,350	0/0:10,0:10:24.06:0,24,256	0/0:30,0:30:34.81:0,35,512	0/0:23,0:23:45.11:0,45,477	0/1:15,2:17:10.02:10,0,296	0/0:16,0:16:39.15:0,39,390	0/0:6,0:6:12.03:0,12,128	0/0:5,0:5:15.04:0,15,160	0/0:15,1:16:8.46:0,8,293	0/0:7,0:7:15.04:0,15,160	0/0:12,0:12:36.08:0,36,378	0/0:21,1:23:35.25:0,35,548	0/0:21,0:20:42.08:0,42,434	0/0:12,0:11:27.07:0,27,284
chr10	13951095	.	T	TAAAAACA	20913.99	PASS	AB=0.989;AC=44;AF=0.815;AN=54;BaseQRankSum=-4.564;DP=548;FS=27.220;HRun=0;HaplotypeScore=123.4566;InbreedingCoeff=0.7501;MQ=66.62;MQ0=2;MQRankSum=-8.923;QD=43.94;ReadPosRankSum=-0.486;VQSLOD=2.8662;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:84.24:0,84,1807	1/1:2,7:9:18.06:663,18,0	0/1:45,0:25:10.74:11,0,313	0/1:45,0:23:12.34:12,0,309	1/1:7,15:22:45.12:1523,45,0	1/1:6,6:15:21.07:738,21,0	1/1:7,2:10:21.07:609,21,0	1/1:44,0:43:66.65:1510,67,0	1/1:4,6:10:18.06:606,18,0	1/1:10,9:19:33.11:1121,33,0	1/1:11,12:25:45.63:1465,46,0	0/0:10,0:10:24.08:0,24,527	1/1:3,5:9:12.93:433,13,0	1/1:4,5:11:18.06:650,18,0	1/1:4,11:15:30.10:1106,30,0	1/1:7,5:13:30.10:1068,30,0	1/1:17,11:29:31.66:1047,32,0	1/1:11,10:21:17.95:663,18,0	1/1:14,8:23:33.09:944,33,0	1/1:15,5:20:30.10:1030,30,0	./.	0/0:7,0:7:21.04:0,21,433	1/1:7,8:16:13.09:977,13,0	1/1:7,4:13:15.02:543,15,0	0/0:15,0:15:36.11:0,36,768	1/1:7,17:25:57.17:1727,57,0	1/1:8,10:18:33.11:1142,33,0	1/1:2,13:15:36.12:1327,36,0
chr10	13951118	.	AGC	A	447.10	PASS	AB=0.891;AC=4;AF=0.071;AN=56;BaseQRankSum=3.502;DP=492;FS=3.662;HRun=0;HaplotypeScore=126.6760;InbreedingCoeff=-0.0705;MQ=70.65;MQ0=0;MQRankSum=-1.182;QD=5.66;ReadPosRankSum=-5.426;VQSLOD=1.3454;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,117,2334	0/0:10,0:10:30.09:0,30,442	0/0:30,0:24:31.75:0,32,1013	0/0:30,0:21:21.30:0,21,581	0/0:20,0:19:56.61:0,57,783	0/0:9,0:9:21.03:0,21,247	0/1:12,3:15:99:102,0,546	0/1:22,13:34:99:433,0,1151	0/0:9,0:9:27.09:0,27,403	0/0:20,0:19:0.85:0,1,896	0/0:21,1:22:14.98:0,15,874	0/0:14,0:14:42.14:0,42,828	0/1:7,0:7:0.43:0,0,179	0/0:9,0:9:21.06:0,21,273	0/0:13,0:13:35.49:0,35,490	0/0:15,0:15:45.15:0,45,749	0/1:22,0:22:1.12:1,0,735	0/0:14,0:14:12.71:0,13,567	0/0:19,0:19:57.19:0,57,1006	0/0:17,0:17:48.15:0,48,821	0/0:6,0:6:15.05:0,15,290	0/0:11,0:11:33.09:0,33,619	0/0:12,0:13:33.81:0,34,379	0/0:15,0:15:26.56:0,27,415	0/0:21,0:21:60.19:0,60,1160	0/0:18,0:18:23.70:0,24,682	0/0:22,0:21:60.20:0,60,1020	0/0:14,0:14:42.13:0,42,563
chr10	13951705	.	GC	G	1389.87	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.811;DP=673;FS=0.575;HRun=4;HaplotypeScore=70.4321;InbreedingCoeff=0.9878;MQ=79.35;MQ0=0;MQRankSum=-0.400;QD=25.27;ReadPosRankSum=-0.040;VQSLOD=2.2588;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,114,1544	0/0:12,0:12:36.12:0,36,502	0/0:20,0:20:48.95:0,49,551	0/0:15,0:15:13.50:0,14,345	0/0:14,0:14:39.13:0,39,546	1/1:1,19:20:42.13:504,42,0	1/1:3,32:35:84.26:1008,84,0	0/0:16,0:16:42.11:0,42,542	0/0:28,0:28:78.26:0,78,1090	0/0:20,0:20:60.20:0,60,834	0/0:12,0:12:33.11:0,33,461	0/0:26,0:26:75.24:0,75,1028	0/0:27,0:27:78.24:0,78,1073	0/0:28,0:28:84.26:0,84,1156	0/0:15,0:15:42.14:0,42,585	0/0:25,0:25:75.24:0,75,1034	0/0:36,0:36:99:0,108,1490	0/0:39,0:39:99:0,108,1512	0/0:27,0:27:78.23:0,78,1045	0/0:20,0:20:54.18:0,54,756	0/0:53,0:53:99:0,153,2107	0/0:15,0:15:42.13:0,42,570	0/0:12,0:12:30.10:0,30,419	0/0:35,0:35:99:0,102,1428	0/0:11,0:11:30.09:0,30,405	0/0:25,0:25:75.23:0,75,1019	0/0:22,0:22:66.21:0,66,904	0/0:23,0:23:60.19:0,60,824
chr10	13951998	.	CG	C	7975.81	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=14.523;DP=500;FS=11.799;HRun=5;HaplotypeScore=74.6726;InbreedingCoeff=0.9597;MQ=67.78;MQ0=16;MQRankSum=-3.291;QD=24.32;ReadPosRankSum=3.703;VQSLOD=3.5090;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:78.23:0,78,1028	1/1:1,5:6:12.03:133,12,0	0/0:21,0:13:30.52:0,31,366	0/0:24,0:16:38.01:0,38,520	1/1:4,12:16:30.08:333,30,0	0/0:30,0:29:78.20:0,78,1026	0/0:17,0:16:48.10:0,48,613	1/1:3,17:20:48.11:519,48,0	1/1:4,6:10:15.04:167,15,0	1/1:6,17:23:48.13:533,48,0	1/1:4,22:26:57.15:634,57,0	0/0:14,0:14:39.07:0,39,494	1/1:3,11:11:24.06:267,24,0	1/1:3,8:10:15.04:166,15,0	1/1:1,15:16:39.11:434,39,0	1/1:11,0:11:3:34,3,0	1/1:1,22:22:60.16:666,60,0	1/1:1,12:12:33.09:367,33,0	1/1:4,14:18:42.07:452,42,0	1/1:1,14:15:39.06:419,39,0	1/1:3,19:19:48.13:533,48,0	0/0:21,0:21:60.16:0,60,769	1/1:1,15:16:36.10:400,36,0	1/1:2,15:16:42.10:459,42,0	0/0:16,0:16:39.13:0,39,527	1/1:3,20:23:60.16:666,60,0	1/1:3,18:21:51.14:566,51,0	1/1:1,6:7:21.05:229,21,0
chr10	13952003	.	GA	G	7974.22	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=14.926;DP=493;FS=12.481;HRun=1;HaplotypeScore=73.5351;InbreedingCoeff=0.9558;MQ=74.24;MQ0=10;MQRankSum=-2.337;QD=24.84;ReadPosRankSum=4.546;VQSLOD=3.5112;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:84.19:0,84,1232	1/1:6,0:6:12.03:133,12,0	0/0:23,0:16:13.24:0,13,460	0/0:24,0:18:48.57:0,49,678	1/1:12,0:12:30.08:333,30,0	0/0:27,0:26:78.26:0,78,1208	0/0:18,0:18:54.16:0,54,794	1/1:25,0:25:48.11:519,48,0	1/1:7,0:7:15.04:167,15,0	1/1:19,0:19:48.13:533,48,0	1/1:23,0:23:57.15:634,57,0	0/0:13,0:13:36.12:0,36,555	1/1:13,0:10:24.06:267,24,0	1/1:9,0:9:15.04:166,15,0	1/1:16,0:16:39.11:434,39,0	1/1:0,10:10:3:31,3,0	1/1:26,0:26:60.16:666,60,0	1/1:14,0:13:33.09:367,33,0	1/1:16,0:16:42.07:452,42,0	1/1:14,0:14:39.06:419,39,0	1/1:22,0:21:48.13:533,48,0	0/0:20,0:20:60.20:0,60,932	1/1:16,0:16:36.10:400,36,0	1/1:17,0:16:42.10:459,42,0	0/0:16,0:16:45.11:0,45,640	1/1:23,0:23:60.16:666,60,0	1/1:21,0:21:51.14:566,51,0	1/1:12,0:12:21.05:229,21,0
chr10	13954799	.	G	GGCT	2094.63	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-8.798;DP=687;FS=2.156;HRun=0;HaplotypeScore=114.2682;InbreedingCoeff=0.9262;MQ=84.83;MQ0=0;MQRankSum=-2.737;QD=34.91;ReadPosRankSum=-0.698;VQSLOD=4.2685;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:75.25:0,75,1093	0/0:10,0:10:24.08:0,24,349	0/0:27,0:27:48.15:0,48,684	0/0:30,0:30:51.17:0,51,715	0/0:14,0:14:18.06:0,18,264	1/1:8,12:21:30.10:619,30,0	1/1:9,30:39:78.27:1597,78,0	0/0:16,0:16:27.07:0,27,344	0/0:30,0:30:66.21:0,66,946	0/0:24,0:24:30.09:0,30,404	0/0:11,0:11:21.05:0,21,287	0/0:40,0:40:99:0,99,1449	0/0:30,0:30:69.23:0,69,1010	0/0:23,0:23:54.17:0,54,772	0/0:39,0:39:99:0,99,1429	0/0:21,0:21:57.19:0,57,835	0/0:28,0:28:69.20:0,69,963	0/0:32,0:32:87.24:0,87,1229	0/0:31,0:31:48.12:0,48,640	0/0:8,0:8:12.04:0,12,176	0/0:71,0:71:99:0,172,2431	0/0:11,0:11:15.05:0,15,220	0/0:4,0:4:9.03:0,9,130	0/0:39,0:39:99:0,108,1557	0/0:9,0:9:15.05:0,15,214	0/0:25,0:25:45.13:0,45,622	0/0:15,0:15:36.12:0,36,527	0/0:6,0:6:15.05:0,15,218
chr10	13956079	.	T	TAG	26095.24	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=12.427;DP=716;FS=1.512;HRun=0;HaplotypeScore=119.5551;InbreedingCoeff=0.9981;MQ=79.52;MQ0=0;MQRankSum=-6.012;QD=46.52;ReadPosRankSum=2.849;VQSLOD=5.8884;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,123,1805	1/1:1,9:10:27.09:501,27,0	0/0:20,0:20:51.12:0,51,688	0/0:19,0:19:44.62:0,45,681	1/1:2,18:20:45.15:811,45,0	1/1:4,25:29:75.26:1393,75,0	1/1:3,30:33:84.29:1564,84,0	1/1:4,18:23:66.21:1196,66,0	1/1:3,20:23:63.22:1171,63,0	1/1:3,31:34:96.31:1732,96,0	1/1:2,6:9:18.06:332,18,0	0/0:33,0:33:99:0,99,1456	1/1:3,21:24:63.22:1175,63,0	1/1:3,17:20:45.15:834,45,0	1/1:1,29:31:81.27:1486,81,0	1/1:2,25:27:63.22:1175,63,0	1/1:1,37:39:96.33:1797,96,0	1/1:1,24:25:60.21:1118,60,0	1/1:5,13:18:48.12:853,48,0	1/1:0,16:16:39.13:722,39,0	1/1:5,46:51:99:2150,117,0	0/0:20,0:20:60.20:0,60,884	1/1:3,16:19:45.14:827,45,0	1/1:2,26:28:75.26:1404,75,0	0/0:21,0:21:60.20:0,60,881	1/1:7,30:39:70.04:1871,70,0	1/1:2,22:28:66.18:1199,66,0	1/1:0,15:15:42.14:786,42,0
chr10	13957408	.	C	CACCG	38764.36	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-13.393;DP=801;FS=0.323;HRun=0;HaplotypeScore=132.3792;InbreedingCoeff=0.9939;MQ=81.93;MQ0=0;MQRankSum=-10.137;QD=61.83;ReadPosRankSum=2.398;VQSLOD=6.7447;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,117,2151	1/1:0,11:11:29.85:791,30,0	0/0:25,0:25:62.75:0,63,1164	0/0:27,0:27:78.27:0,78,1364	1/1:3,13:20:27.09:682,27,0	1/1:4,19:24:62.58:1578,63,0	1/1:7,35:45:99:2883,111,0	1/1:8,19:27:72.25:1821,72,0	1/1:4,27:32:87.30:2268,87,0	1/1:1,18:19:60.18:1471,60,0	1/1:2,6:13:18.06:480,18,0	0/0:37,0:37:99:0,111,2097	1/1:9,29:41:99:2623,105,0	1/1:3,36:39:99:2904,108,0	1/1:8,27:37:87.30:2274,87,0	1/1:2,31:34:87.30:2284,87,0	1/1:2,25:27:66.23:1780,66,0	1/1:0,23:24:69.24:1846,69,0	1/1:9,13:23:54.16:1269,54,0	1/1:2,6:8:15.05:403,15,0	1/1:13,74:94:99:4761,180,0	0/0:22,0:22:66.23:0,66,1242	1/1:3,8:12:30.10:792,30,0	1/1:5,21:28:60.21:1592,60,0	0/0:21,0:21:57.17:0,57,1047	1/1:6,23:33:90.31:2303,90,0	1/1:5,18:25:54.18:1423,54,0	1/1:4,6:10:21.07:537,21,0
chr10	13959383	.	CT	C	895.51	PASS	AB=0.792;AC=4;AF=0.071;AN=56;BaseQRankSum=-2.893;DP=496;FS=10.151;HRun=3;HaplotypeScore=107.1304;InbreedingCoeff=0.3948;MQ=58.62;MQ0=11;MQRankSum=-3.684;QD=14.21;ReadPosRankSum=-2.508;VQSLOD=1.6434;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:69.08:0,69,918	0/0:12,0:11:23.80:0,24,252	0/1:15,0:9:15.16:15,0,215	0/0:12,0:8:13.14:0,13,180	0/0:15,0:14:36:0,36,390	0/1:6,15:20:54.82:419,0,55	1/1:8,19:23:33.13:575,33,0	0/0:30,0:29:52.30:0,52,664	0/0:16,0:16:2.04:0,2,270	0/0:21,0:20:56.92:0,57,658	0/0:11,0:10:14.88:0,15,155	0/0:13,0:13:39.13:0,39,560	0/0:18,0:17:36.10:0,36,402	0/0:17,0:17:27.08:0,27,308	0/0:15,0:15:18.05:0,18,213	0/0:13,0:13:21.02:0,21,232	0/0:34,0:34:54.14:0,54,617	0/0:22,0:22:63.09:0,63,669	0/0:18,0:17:43.74:0,44,542	0/0:8,0:8:24.02:0,24,260	0/0:20,0:20:45.11:0,45,506	0/0:8,0:8:24.08:0,24,345	0/0:8,0:8:14.92:0,15,171	0/0:23,0:21:61.84:0,62,615	0/0:10,0:10:24.08:0,24,343	0/0:26,0:25:75.14:0,75,871	0/0:24,0:23:56.99:0,57,593	0/0:11,0:11:27.07:0,27,298
chr10	13959388	.	TTTC	T	12377.29	PASS	AB=0.607;AC=40;AF=0.714;AN=56;BaseQRankSum=1.166;DP=483;FS=8.215;HRun=0;HaplotypeScore=81.7623;InbreedingCoeff=0.6762;MQ=57.33;MQ0=12;MQRankSum=0.292;QD=30.94;ReadPosRankSum=3.004;VQSLOD=4.5080;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:47.35:0,47,1271	1/1:5,8:12:18.97:310,19,0	0/0:12,0:6:16.86:0,17,263	0/0:12,0:8:14.45:0,14,243	0/1:5,10:14:5.77:446,0,6	1/1:21,0:20:11.19:329,11,0	1/1:27,0:22:41.75:622,42,0	1/1:3,24:26:71.46:1186,71,0	1/1:3,12:15:23.57:369,24,0	0/1:5,15:19:5.25:743,0,5	1/1:4,7:10:12.51:212,13,0	0/0:13,0:13:39.13:0,39,842	1/1:3,13:16:26.48:471,26,0	1/1:5,13:18:27.96:443,28,0	1/1:2,14:16:18.95:320,19,0	0/1:3,8:11:9.59:197,0,10	1/1:5,30:35:30.99:777,31,0	1/1:12,10:22:46.87:988,47,0	1/1:6,12:16:41.78:676,42,0	1/1:2,7:9:15.77:349,16,0	1/1:0,17:17:39.13:688,39,0	0/0:8,0:8:24.01:0,24,417	1/1:2,6:8:14.84:245,15,0	1/1:16,6:20:54.14:891,54,0	0/0:9,0:9:24.06:0,24,459	1/1:9,16:24:54.40:902,54,0	0/1:12,11:23:9:738,0,9	1/1:0,11:11:27.09:476,27,0
chr10	13959389	.	TTC	T	5688.27	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=5.906;DP=481;FS=20.406;HRun=0;HaplotypeScore=98.3505;InbreedingCoeff=0.9770;MQ=57.10;MQ0=13;MQRankSum=0.360;QD=14.29;ReadPosRankSum=1.001;VQSLOD=3.1066;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:40.62:0,41,855	1/1:10,2:12:23.49:187,23,0	0/0:12,0:6:14.68:0,15,161	0/0:12,0:8:15.89:0,16,188	1/1:13,1:14:24.39:176,24,0	1/1:7,12:18:39.13:539,39,0	1/1:16,13:24:62.34:698,62,0	1/1:26,1:26:53.11:326,53,0	1/1:14,1:15:26.44:196,26,0	1/1:18,2:19:55.12:347,55,0	1/1:7,3:10:14.62:106,15,0	0/0:13,0:13:39.13:0,39,608	1/1:13,3:16:31.94:223,32,0	1/1:14,1:18:28.67:175,29,0	1/1:15,1:16:20.43:137,20,0	1/1:10,1:11:14.55:81,15,0	1/1:33,3:35:50.44:323,50,0	1/1:11,0:22:60.21:320,60,0	1/1:14,1:15:41.65:242,42,0	1/1:7,2:9:24.78:154,25,0	1/1:17,0:17:37.73:204,38,0	0/0:8,0:8:16.30:0,16,239	1/1:6,2:8:14.58:106,15,0	1/1:9,1:19:49.04:268,49,0	0/0:9,0:9:21.07:0,21,319	1/1:17,5:23:66.30:485,66,0	1/1:18,0:22:46.79:255,47,0	1/1:11,0:11:26.12:141,26,0
chr10	13959391	.	C	CTT	6381.10	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=6.052;DP=483;FS=21.361;HRun=3;HaplotypeScore=96.5346;InbreedingCoeff=0.9462;MQ=56.89;MQ0=15;MQRankSum=-1.446;QD=15.79;ReadPosRankSum=0.911;VQSLOD=1.0366;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:28:5.17:0,5,721	1/1:12,1:12:23.50:191,24,0	0/0:12,0:6:14.68:0,15,161	0/0:12,0:8:15.89:0,16,188	1/1:14,2:15:32.59:242,33,0	1/1:12,7:18:38.49:504,38,0	1/1:23,5:26:71.40:790,71,0	1/1:28,0:26:53.11:326,53,0	1/1:14,1:15:26.44:220,26,0	1/1:18,2:19:55.58:437,56,0	1/1:11,0:10:14.62:106,15,0	0/0:13,0:13:37.37:0,37,534	1/1:16,0:16:31.96:203,32,0	1/1:18,0:18:29.35:231,29,0	1/1:16,0:16:20.43:137,20,0	1/1:9,2:11:14.62:121,15,0	1/1:36,0:36:50.54:334,51,0	1/1:22,0:22:61.24:379,61,0	1/1:18,0:15:43.76:301,44,0	1/1:9,0:9:24.78:157,25,0	1/1:17,0:17:37.73:204,38,0	0/0:6,0:6:10.83:0,11,220	1/1:8,0:8:14.58:106,15,0	1/1:19,1:18:49.72:317,50,0	0/0:8,0:8:21.07:0,21,304	1/1:25,0:24:67.14:487,67,0	1/1:16,7:22:51.12:405,51,0	1/1:11,0:11:26.34:184,26,0
chr10	13959469	.	C	CT	1541.93	PASS	AB=0.842;AC=38;AF=0.679;AN=56;BaseQRankSum=-0.566;DP=297;FS=7.482;HRun=12;HaplotypeScore=43.5584;InbreedingCoeff=0.0081;MQ=47.72;MQ0=14;MQRankSum=-0.496;QD=5.98;ReadPosRankSum=-1.422;VQSLOD=0.6950;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:20:40.79:0,41,290	1/1:6,2:6:3:29,3,0	0/1:29,1:7:13.24:13,0,48	0/1:21,0:5:5.61:6,0,25	1/1:5,5:9:12.02:117,12,0	1/1:9,9:18:2.15:159,2,0	0/1:7,5:8:15.90:23,0,16	1/1:5,1:5:3:29,3,0	0/1:6,4:10:6.89:100,0,7	1/1:4,1:5:3:29,3,0	0/1:9,1:9:12.99:30,0,13	0/0:6,0:8:18.97:0,19,119	1/1:5,4:7:6.01:58,6,0	1/1:6,2:8:14.68:110,15,0	0/1:8,3:11:46.60:65,0,47	0/1:5,4:8:6.64:93,0,7	1/1:9,3:11:9.01:88,9,0	0/1:9,1:10:18.04:18,0,39	0/1:8,1:9:10.06:60,0,10	0/0:4,1:5:2.95:0,3,22	1/1:2,3:3:9.01:88,9,0	0/0:6,0:5:1.06:0,1,55	1/1:4,1:5:3:29,3,0	1/1:2,8:10:5.14:211,5,0	0/1:8,1:9:11.27:11,0,92	1/1:7,5:8:9.01:88,9,0	1/1:7,6:13:20.83:188,21,0	1/1:0,3:2:6.01:58,6,0
chr10	13960363	.	T	TAA	759.38	PASS	AB=0.796;AC=6;AF=0.107;AN=56;BaseQRankSum=6.757;DP=466;FS=2.779;HRun=0;HaplotypeScore=72.1858;InbreedingCoeff=-0.1426;MQ=56.98;MQ0=3;MQRankSum=-0.077;QD=4.75;ReadPosRankSum=1.091;VQSLOD=2.5438;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:45.15:0,45,694	0/0:5,0:5:15.05:0,15,233	0/0:6,0:2:6.02:0,6,86	0/0:15,0:4:6.02:0,6,96	0/1:24,3:27:78.41:78,0,769	0/0:24,0:24:69.18:0,69,1045	0/0:8,0:8:21.05:0,21,314	0/0:31,0:30:81.25:0,81,1202	0/0:7,0:7:18.05:0,18,244	0/1:19,8:28:99:350,0,281	0/0:24,0:24:9.77:0,10,801	0/0:12,0:12:27.09:0,27,424	0/0:6,0:6:15.05:0,15,233	0/0:7,0:7:15.05:0,15,223	0/1:12,7:20:99:229,0,460	0/1:13,8:23:99:161,0,392	0/0:23,0:23:54.16:0,54,844	0/1:30,2:32:18.69:19,0,966	0/0:22,0:21:63.15:0,63,904	0/0:10,0:11:32.70:0,33,477	0/0:5,0:5:15.05:0,15,241	0/0:2,0:2:4.26:0,4,51	0/0:4,0:4:12.03:0,12,162	0/0:6,0:6:15.05:0,15,243	0/1:20,1:22:45.15:45,0,639	0/0:18,0:18:54.16:0,54,823	0/0:25,0:25:72.25:0,72,1151	0/0:25,0:23:60.19:0,60,907
chr10	13960364	.	TA	T	451.02	PASS	AB=0.835;AC=13;AF=0.232;AN=56;BaseQRankSum=1.012;DP=476;FS=6.778;HRun=14;HaplotypeScore=62.6092;InbreedingCoeff=0.2650;MQ=56.74;MQ0=3;MQRankSum=0.512;QD=4.47;ReadPosRankSum=0.744;VQSLOD=1.3031;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,16:19:32.70:226,33,0	0/0:4,0:5:11.85:0,12,98	0/1:7,0:2:7.30:7,0,19	0/0:14,0:4:5.37:0,5,36	0/0:29,2:29:15.32:0,15,328	0/0:23,0:24:44.16:0,44,451	0/1:5,2:7:5.59:6,0,88	0/0:27,1:27:27.40:0,27,380	0/1:5,1:7:5.72:6,0,80	0/0:32,0:30:54.74:0,55,321	0/0:23,3:25:6.37:0,6,287	1/1:3,9:12:17.81:123,18,0	0/0:6,0:6:14.99:0,15,132	0/1:5,2:7:5.59:6,0,89	0/0:22,0:22:49.61:0,50,348	0/0:22,0:22:46.24:0,46,308	0/0:23,0:23:27.42:0,27,382	0/0:35,2:35:30.35:0,30,502	0/0:19,1:21:3.73:0,4,277	0/1:11,1:12:7.25:7,0,144	0/1:4,1:5:11.57:12,0,47	1/1:0,2:2:5.90:38,6,0	0/0:4,0:4:6:0,6,52	0/0:7,0:7:12.01:0,12,112	0/1:11,12:23:40.73:176,0,41	0/0:17,0:19:35.82:0,36,310	0/0:24,0:25:41.50:0,42,448	0/0:25,0:24:35.65:0,36,297
chr10	13960627	.	GAA	G	14870.90	PASS	AB=0.640;AC=45;AF=0.804;AN=56;BaseQRankSum=8.408;DP=666;FS=2.492;HRun=10;HaplotypeScore=87.9368;InbreedingCoeff=0.8811;MQ=71.89;MQ0=1;MQRankSum=-3.712;QD=26.51;ReadPosRankSum=3.148;VQSLOD=5.1116;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:45:99:0,126,1871	1/1:0,10:10:30.08:334,30,0	0/0:12,0:12:24.08:0,24,362	0/0:16,0:16:16.10:0,16,195	1/1:4,31:35:75.16:836,75,0	1/1:3,19:22:44.79:501,45,0	1/1:2,10:12:27.07:301,27,0	1/1:4,27:31:78.20:869,78,0	1/1:2,14:16:36.09:401,36,0	1/1:6,41:46:99:1338,120,0	1/1:1,21:22:51.11:568,51,0	0/0:22,0:23:63.19:0,63,937	1/1:1,16:17:48.13:535,48,0	1/1:2,19:21:51.13:568,51,0	1/1:6,45:51:99:1338,120,0	1/1:8,45:54:99:1389,126,0	1/1:1,10:11:24.04:268,24,0	1/1:1,25:27:68.92:748,69,0	1/1:2,20:22:60.16:669,60,0	1/1:0,12:12:24.05:268,24,0	1/1:5,31:37:78.19:870,78,0	0/0:9,0:9:27.09:0,27,428	1/1:1,10:11:27.06:301,27,0	1/1:1,17:18:48.12:535,48,0	0/1:7,9:16:99:262,0,151	1/1:2,25:27:75.20:836,75,0	1/1:2,31:33:81.21:903,81,0	1/1:0,9:8:21.06:234,21,0
chr10	13960982	.	TTA	T	386.71	PASS	AB=0.885;AC=9;AF=0.205;AN=44;BaseQRankSum=3.770;DP=254;FS=25.156;HRun=0;HaplotypeScore=54.2516;InbreedingCoeff=-0.0803;MQ=73.77;MQ0=2;MQRankSum=0.135;QD=3.52;ReadPosRankSum=-0.039;VQSLOD=0.3497;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:17:36.09:0,36,520	0/0:2,0:2:3.01:0,3,49	0/0:11,0:6:3.01:0,3,39	0/1:24,0:13:2.51:3,0,30	0/1:14,2:16:61.09:61,0,177	0/0:4,0:4:9.03:0,9,142	./.	0/0:38,0:38:61.71:0,62,915	0/0:5,0:5:9.03:0,9,148	0/1:9,0:9:19.38:19,0,207	0/1:6,2:8:59.97:60,0,109	./.	./.	0/0:3,0:3:6.02:0,6,99	1/1:5,5:10:9.03:112,9,0	0/1:7,1:8:22.20:22,0,180	0/0:16,0:16:30.10:0,30,487	0/1:18,7:25:99:215,0,410	0/0:11,0:11:15.04:0,15,209	./.	0/0:5,0:4:3.01:0,3,46	./.	0/0:4,0:4:6.02:0,6,99	./.	0/1:8,2:10:19.46:19,0,224	0/0:7,0:6:12.04:0,12,179	0/0:6,0:6:12.04:0,12,185	0/0:6,0:6:15.05:0,15,247
chr10	13961033	.	T	TA	4089.64	PASS	AB=1.000;AC=43;AF=0.796;AN=54;BaseQRankSum=4.035;DP=203;FS=4.720;HRun=7;HaplotypeScore=54.4758;InbreedingCoeff=0.6283;MQ=78.16;MQ0=0;MQRankSum=-5.569;QD=26.22;ReadPosRankSum=0.260;VQSLOD=4.2747;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:17:45.05:0,45,428	1/1:1,2:3:6.02:72,6,0	0/0:8,0:6:16.24:0,16,140	0/0:13,0:11:22.99:0,23,197	1/1:0,10:10:27.08:326,27,0	1/1:0,2:2:3.01:36,3,0	1/1:1,2:3:8.96:90,9,0	1/1:9,22:31:40.19:739,40,0	1/1:2,4:6:17.93:179,18,0	1/1:0,4:3:9.03:109,9,0	1/1:2,4:6:14.95:150,15,0	0/0:2,0:2:6.01:0,6,58	1/1:0,2:2:5.95:54,6,0	1/1:0,3:3:6.02:72,6,0	1/1:3,7:10:26.87:302,27,0	1/1:4,4:8:15.05:179,15,0	1/1:3,8:11:24.07:282,24,0	1/1:3,12:15:35.08:432,35,0	1/1:0,8:7:21.06:254,21,0	1/1:0,3:3:9.03:109,9,0	./.	0/0:1,0:1:3:0,3,29	1/1:0,4:4:11.95:126,12,0	1/1:0,1:1:3.01:36,3,0	0/1:8,0:8:36.13:36,0,150	1/1:1,4:5:15.05:180,15,0	1/1:1,7:8:21.06:254,21,0	1/1:2,3:5:6.02:72,6,0
chr10	13961062	.	CATCT	C	7789.77	PASS	AB=0.857;AC=45;AF=0.804;AN=56;BaseQRankSum=9.068;DP=273;FS=0.697;HRun=0;HaplotypeScore=79.2007;InbreedingCoeff=0.7428;MQ=93.35;MQ0=3;MQRankSum=-11.111;QD=43.76;ReadPosRankSum=0.285;VQSLOD=4.9687;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:21:54.19:0,54,1439	1/1:0,4:4:12.04:223,12,0	0/0:29,0:24:66.23:0,66,1614	0/0:31,0:25:35.85:0,36,1286	1/1:3,5:8:18.04:302,18,0	1/1:0,2:2:6.02:112,6,0	1/1:1,7:8:24.08:439,24,0	1/1:9,22:31:90.19:1508,90,0	1/1:0,6:6:18.06:335,18,0	1/1:2,5:6:15.04:251,15,0	1/1:1,5:6:15.05:279,15,0	0/0:6,0:6:15.05:0,15,399	1/1:0,2:2:6.02:112,6,0	1/1:0,2:2:3.01:56,3,0	1/1:0,11:11:30.10:559,30,0	1/1:0,6:6:18.06:335,18,0	1/1:0,8:8:12.04:224,12,0	1/1:0,9:9:18.06:336,18,0	1/1:0,14:14:36.12:658,36,0	1/1:0,6:6:12.02:223,12,0	1/1:0,11:10:23.96:447,24,0	0/0:6,0:6:14.79:0,15,399	1/1:0,2:2:6.02:112,6,0	1/1:0,5:5:9.03:168,9,0	0/1:5,1:6:40.73:41,0,247	1/1:1,11:11:33.06:547,33,0	1/1:1,6:7:15.05:280,15,0	1/1:1,4:5:15.02:246,15,0
chr10	13961083	.	TTGTGTGTG	T	1745.84	PASS	AB=0.929;AC=36;AF=0.783;AN=46;BaseQRankSum=6.094;DP=298;FS=0.000;HRun=0;HaplotypeScore=112.8812;InbreedingCoeff=0.3765;MQ=69.53;MQ0=11;MQRankSum=-5.378;QD=10.33;ReadPosRankSum=-0.440;VQSLOD=2.2088;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:24:33.09:0,33,1140	1/1:2,3:5:9.03:225,9,0	./.	./.	1/1:5,1:6:3.01:39,3,0	1/1:1,0:2:3.01:56,3,0	1/1:8,0:10:6.02:94,6,0	0/1:31,0:30:2.34:22,0,2	1/1:5,2:7:9.02:178,9,0	0/1:5,1:5:45.74:69,0,46	1/1:4,1:5:3.01:75,3,0	0/0:8,0:8:15.05:0,15,489	./.	1/1:1,1:2:3.01:75,3,0	1/1:9,1:11:6.02:96,6,0	1/1:5,1:6:3.01:75,3,0	1/1:7,4:12:11.95:155,12,0	./.	1/1:14,1:16:5.91:131,6,0	1/1:4,2:7:8.20:102,8,0	1/1:15,1:13:3.01:75,3,0	0/0:7,0:7:11.94:0,12,325	./.	1/1:5,2:7:3.01:75,3,0	0/0:4,0:4:6.02:0,6,173	1/1:7,2:8:6.01:150,6,0	1/1:5,1:7:5.23:46,5,0	1/1:2,2:4:6.02:150,6,0
chr10	13961273	.	A	ATT	2712.52	PASS	AB=0.826;AC=38;AF=0.704;AN=54;BaseQRankSum=0.094;DP=315;FS=4.302;HRun=15;HaplotypeScore=50.8561;InbreedingCoeff=0.6916;MQ=67.19;MQ0=15;MQRankSum=-3.965;QD=13.77;ReadPosRankSum=-1.546;VQSLOD=1.9199;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:26:34.14:0,34,263	1/1:2,0:4:2.37:9,2,0	0/0:18,0:9:5.48:0,5,43	0/0:18,0:10:6.84:0,7,32	1/1:6,5:10:17.84:177,18,0	0/0:11,0:11:23.86:0,24,190	0/0:18,0:17:14.07:0,14,156	1/1:19,4:23:15.80:282,16,0	1/1:4,2:7:8.23:73,8,0	1/1:3,5:9:20.46:185,20,0	1/1:2,1:4:3:28,3,0	0/0:13,0:14:11.34:0,11,121	1/1:1,0:2:4.99:17,5,0	1/1:5,3:8:15.01:170,15,0	1/1:3,6:10:24.02:275,24,0	1/1:3,3:7:14.36:141,14,0	1/1:8,13:22:32.71:360,33,0	1/1:12,3:11:17.94:175,18,0	1/1:7,3:15:26.40:267,26,0	0/1:1,0:1:0:0,0,0	1/1:5,3:8:14.38:140,14,0	./.	1/1:1,0:1:3:28,3,0	1/1:3,4:8:14.53:151,15,0	0/0:8,0:8:5.84:0,6,47	0/1:6,5:13:6.19:211,0,6	1/1:5,4:10:12.56:98,13,0	1/1:6,2:7:9.02:104,9,0
chr10	13962041	.	AT	A	6310.39	PASS	AB=0.806;AC=43;AF=0.768;AN=56;BaseQRankSum=1.558;DP=474;FS=6.117;HRun=11;HaplotypeScore=57.5606;InbreedingCoeff=0.7160;MQ=71.33;MQ0=0;MQRankSum=-0.558;QD=15.98;ReadPosRankSum=3.929;VQSLOD=5.5590;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:25:38.40:0,38,505	1/1:1,4:6:14.02:104,14,0	0/0:11,0:11:12.65:0,13,94	0/1:12,0:10:2:2,0,34	1/1:7,13:20:32.53:264,33,0	1/1:5,12:17:25.02:281,25,0	1/1:2,17:21:52:406,52,0	1/1:11,26:37:75.63:602,76,0	1/1:2,7:9:20.97:172,21,0	0/1:11,9:19:5.08:166,0,5	1/1:2,13:15:26.90:222,27,0	0/0:12,0:12:36.08:0,36,376	1/1:0,16:16:41.95:345,42,0	1/1:0,6:6:8.99:74,9,0	1/1:4,11:15:23.68:197,24,0	1/1:1,17:18:47.94:394,48,0	1/1:1,25:26:65.92:542,66,0	1/1:2,20:22:50.94:419,51,0	1/1:6,9:15:23.90:191,24,0	1/1:6,11:17:32.91:271,33,0	1/1:1,12:13:29.96:246,30,0	0/0:16,0:16:32.53:0,33,266	1/1:8,11:20:3.19:238,3,0	1/1:1,19:20:58.75:473,59,0	0/0:14,0:14:32.87:0,33,319	1/1:6,13:20:37.84:287,38,0	1/1:3,18:22:46.97:375,47,0	0/1:5,3:8:23:40,0,23
chr10	13962170	.	GGTT	G	3901.68	PASS	AB=0.994;AC=32;AF=0.571;AN=56;BaseQRankSum=2.097;DP=538;FS=0.000;HRun=0;HaplotypeScore=107.9015;InbreedingCoeff=0.1724;MQ=66.58;MQ0=2;MQRankSum=-3.357;QD=9.56;ReadPosRankSum=1.711;VQSLOD=2.7843;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:78.56:0,79,1218	0/1:10,0:10:3.61:79,0,4	0/0:31,0:11:16.80:0,17,229	0/0:19,0:11:18.89:0,19,145	0/1:26,0:26:15.74:186,0,16	1/1:15,2:17:40.09:356,40,0	1/1:16,0:16:2.42:126,2,0	0/1:30,0:30:35.42:151,0,35	0/1:15,0:15:31.70:42,0,32	1/1:21,0:21:7.54:263,8,0	1/1:21,1:22:14.22:266,14,0	0/0:15,0:15:29.19:0,29,574	0/1:12,1:13:7.58:113,0,8	0/1:14,0:14:0:0,0,0	1/1:20,0:18:34.99:292,35,0	1/1:25,0:24:16.72:300,17,0	1/1:37,1:38:32.63:420,33,0	0/1:14,0:14:16.07:101,0,16	0/1:16,0:16:14.49:94,0,14	0/1:14,0:13:7.34:99,0,7	0/1:8,0:8:1.35:80,0,1	0/0:15,0:16:35.25:0,35,413	1/1:13,0:13:2.69:123,3,0	1/1:21,0:21:33.49:207,33,0	0/0:17,0:17:45.05:0,45,675	0/1:25,0:23:11.32:269,0,11	0/1:15,0:15:25.75:171,0,26	1/1:15,0:14:5.13:162,5,0
chr10	13962172	.	TTG	T	7346.58	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=0.086;DP=551;FS=2.410;HRun=0;HaplotypeScore=88.4349;InbreedingCoeff=0.9244;MQ=65.21;MQ0=5;MQRankSum=-2.809;QD=17.87;ReadPosRankSum=0.051;VQSLOD=4.7728;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:35:61.33:0,61,920	1/1:7,2:9:21.96:216,22,0	0/0:33,0:10:13.77:0,14,177	0/0:21,0:11:20.64:0,21,155	1/1:27,0:27:39.97:388,40,0	1/1:13,5:18:41.97:472,42,0	1/1:2,13:15:15.50:224,15,0	1/1:23,4:27:40.45:511,40,0	1/1:14,0:14:12.65:178,13,0	1/1:20,2:22:49.14:444,49,0	1/1:24,0:24:41.73:446,42,0	0/0:11,3:14:5.44:0,5,411	1/1:11,2:13:23.20:240,23,0	1/1:13,0:13:5.90:37,6,0	1/1:19,2:19:45.83:429,46,0	1/1:24,1:24:54.43:507,54,0	1/1:37,4:41:71.97:756,72,0	1/1:14,0:14:19.53:262,20,0	1/1:14,1:15:19.80:234,20,0	1/1:13,1:13:28.14:223,28,0	1/1:6,0:6:8.71:118,9,0	0/0:18,0:18:32.89:0,33,296	1/1:15,0:15:22.01:219,22,0	1/1:20,2:22:51.02:434,51,0	0/0:18,0:18:47.95:0,48,551	1/1:23,2:23:39.09:445,39,0	1/1:16,0:16:24.70:294,25,0	1/1:13,2:14:25.93:268,26,0
chr10	13962173	.	TG	T	9051.41	PASS	AB=0.944;AC=45;AF=0.804;AN=56;BaseQRankSum=3.074;DP=564;FS=3.490;HRun=1;HaplotypeScore=82.8253;InbreedingCoeff=0.8170;MQ=64.83;MQ0=5;MQRankSum=-2.756;QD=20.76;ReadPosRankSum=-0.381;VQSLOD=4.8408;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:39:26.10:0,26,628	1/1:2,7:9:26.66:257,27,0	0/0:34,0:10:1:0,1,145	0/0:21,0:11:13.81:0,14,128	1/1:18,8:26:64.48:597,64,0	1/1:17,1:18:41.98:387,42,0	1/1:15,1:16:23.60:207,24,0	1/1:17,10:27:71.31:643,71,0	1/1:11,3:14:28.33:333,28,0	1/1:18,4:22:62.01:559,62,0	1/1:18,6:24:55.80:532,56,0	0/0:14,0:14:21.39:0,21,305	1/1:12,2:14:32.14:287,32,0	1/1:0,13:13:5.90:37,6,0	1/1:15,6:19:48.03:464,48,0	1/1:19,7:25:65.52:625,66,0	1/1:24,17:41:87.04:853,87,0	1/1:8,6:14:36.88:353,37,0	1/1:10,5:15:34.13:306,34,0	1/1:11,3:13:38.02:373,38,0	1/1:9,0:9:20:175,20,0	0/1:16,1:17:8.79:9,0,168	1/1:14,3:17:30.31:249,30,0	1/1:15,8:23:55.67:570,56,0	0/0:19,0:19:50.03:0,50,432	1/1:18,6:22:63.27:594,63,0	1/1:13,3:15:42.61:335,43,0	1/1:14,2:15:35.90:309,36,0
chr10	13962188	.	TTC	T	2985.72	PASS	AB=0.994;AC=34;AF=0.607;AN=56;BaseQRankSum=3.764;DP=576;FS=79.912;HRun=0;HaplotypeScore=103.5197;InbreedingCoeff=0.2192;MQ=58.26;MQ0=6;MQRankSum=-3.717;QD=6.85;ReadPosRankSum=0.371;VQSLOD=-0.1306;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:39:29.11:0,29,677	0/1:9,0:9:1.02:80,0,1	0/0:36,0:9:6.34:0,6,98	0/0:17,0:8:9.50:0,9,76	0/1:24,0:24:7.61:145,0,8	1/1:18,1:19:13.20:161,13,0	1/1:14,0:14:11.52:83,12,0	0/1:29,0:29:33.55:219,0,34	1/1:15,0:15:3.26:72,3,0	0/1:18,0:18:17.99:96,0,18	0/1:21,0:21:14.92:141,0,15	0/0:13,0:13:23.06:0,23,242	1/1:17,0:17:5.92:92,6,0	1/1:15,0:15:9.01:29,9,0	1/1:21,0:19:25.05:206,25,0	1/1:24,1:24:25.82:263,26,0	1/1:42,1:42:13.12:384,13,0	1/1:18,0:18:15.28:196,15,0	0/1:18,0:18:16.23:130,0,16	1/1:15,0:14:7.93:116,8,0	1/1:9,0:9:2.36:59,2,0	0/0:18,0:18:20.23:0,20,376	0/1:15,1:16:15.68:82,0,16	1/1:27,0:27:45.37:307,45,0	0/0:16,0:16:37.10:0,37,421	0/1:27,0:25:8.06:131,0,8	0/1:15,0:14:6.97:132,0,7	0/1:21,0:20:4.59:43,0,5
chr10	13962190	.	CT	C	2959.79	PASS	AB=0.613;AC=43;AF=0.768;AN=56;BaseQRankSum=4.421;DP=572;FS=13.187;HRun=15;HaplotypeScore=96.2223;InbreedingCoeff=0.6967;MQ=56.50;MQ0=8;MQRankSum=-1.490;QD=6.87;ReadPosRankSum=3.140;VQSLOD=1.3656;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:38:50.29:0,50,681	1/1:6,4:10:14.84:118,15,0	0/0:35,0:8:1.38:0,1,66	0/0:16,1:7:4.56:0,5,38	1/1:10,14:24:20.41:176,20,0	1/1:9,10:19:14.75:127,15,0	1/1:8,4:12:11.49:149,11,0	1/1:24,4:28:1.79:112,2,0	1/1:10,5:15:8.61:62,9,0	1/1:12,6:18:23.07:189,23,0	1/1:10,10:20:16.54:124,17,0	0/0:15,0:15:23.93:0,24,196	1/1:6,11:17:14.41:121,14,0	1/1:14,0:14:8.88:78,9,0	1/1:7,14:19:17.96:146,18,0	1/1:13,13:25:22.40:177,22,0	1/1:24,19:42:39.48:268,39,0	1/1:8,10:18:31.26:242,31,0	1/1:10,7:17:21.34:152,21,0	1/1:12,2:14:14.59:120,15,0	1/1:9,1:10:2.73:25,3,0	0/0:19,0:19:35.71:0,36,369	1/1:6,9:15:8.08:64,8,0	1/1:12,13:26:23.80:192,24,0	0/0:16,0:16:30.02:0,30,311	1/1:15,13:26:24.97:319,25,0	1/1:15,1:15:5.78:113,6,0	0/1:7,12:18:8.25:64,0,8
chr10	13962995	.	TTC	T	491.75	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=4.803;DP=472;FS=1.962;HRun=0;HaplotypeScore=59.7711;InbreedingCoeff=0.9667;MQ=67.23;MQ0=9;MQRankSum=0.149;QD=18.21;ReadPosRankSum=1.068;VQSLOD=3.5928;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,99,1547	0/0:9,0:9:27.09:0,27,412	0/0:24,0:10:20.83:0,21,215	0/0:20,0:10:15.13:0,15,94	0/0:15,0:15:42.13:0,42,619	1/1:2,15:17:35.74:423,36,0	1/1:1,9:10:15.01:187,15,0	0/0:18,0:18:51.12:0,51,770	0/0:9,0:9:27.02:0,27,384	0/0:20,0:20:56.86:0,57,770	0/0:21,0:21:48.03:0,48,719	0/0:8,0:8:14.31:0,14,331	0/0:8,0:8:24.07:0,24,366	0/0:13,0:13:33.05:0,33,454	0/0:22,0:22:63.68:0,64,982	0/0:14,0:14:42.14:0,42,680	0/0:20,0:20:59.76:0,60,878	0/0:21,0:20:57.12:0,57,868	0/0:17,0:16:45.10:0,45,681	0/0:18,0:18:53.74:0,54,736	0/0:20,0:20:60.07:0,60,841	0/0:9,0:8:23.84:0,24,306	0/0:10,0:9:21.04:0,21,326	0/0:29,0:29:78.22:0,78,1237	0/0:13,0:13:39.11:0,39,588	0/0:20,0:20:54.13:0,54,806	0/0:20,0:20:57.18:0,57,787	0/0:11,0:11:33.09:0,33,487
chr10	13964016	.	C	CCAGCCTCCTGTACTA	52564.12	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-3.864;DP=504;FS=26.238;HRun=0;HaplotypeScore=182.1671;InbreedingCoeff=0.8929;MQ=75.76;MQ0=0;MQRankSum=-15.192;QD=139.06;ReadPosRankSum=3.256;VQSLOD=3.3250;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:96.30:0,96,3940	1/1:2,3:7:12.04:885,12,0	0/0:21,0:21:63.22:0,63,2309	0/0:15,0:15:42.13:0,42,1495	1/1:13,7:22:25.95:1581,26,0	1/1:11,6:19:42.14:2733,42,0	1/1:11,6:17:42.14:2901,42,0	1/1:26,1:28:81.26:4981,81,0	1/1:12,14:29:69.24:4696,69,0	1/1:8,7:15:45.13:2935,45,0	1/1:8,8:19:29.93:1910,30,0	0/0:27,0:27:78.25:0,78,3031	1/1:10,5:17:45.15:2667,45,0	1/1:7,5:16:27.09:1524,27,0	1/1:11,12:30:57.20:4053,57,0	1/1:11,10:23:57.19:3760,57,0	1/1:8,7:16:33.11:2050,33,0	1/1:4,0:4:2.98:22,3,0	1/1:13,3:16:48.16:2476,48,0	1/1:8,7:17:33.11:2192,33,0	1/1:3,0:3:3.01:199,3,0	0/0:14,0:14:39.13:0,39,1776	1/1:5,4:10:15.05:985,15,0	1/1:1,3:5:6.02:451,6,0	0/0:15,0:15:45.14:0,45,1841	1/1:14,9:25:75.26:4378,75,0	1/1:12,13:27:66.23:4505,66,0	1/1:2,2:5:9.03:679,9,0
chr10	13964914	.	A	AC	3516.93	PASS	AC=42;AF=0.778;AN=54;BaseQRankSum=-2.832;DP=358;FS=4.653;HRun=1;HaplotypeScore=47.1606;InbreedingCoeff=0.8720;MQ=70.00;MQ0=27;MQRankSum=-3.590;QD=17.50;ReadPosRankSum=1.241;VQSLOD=3.9100;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:17:22.89:0,23,157	1/1:2,0:2:5.97:46,6,0	0/0:58,0:15:26.07:0,26,254	0/0:41,0:10:16.43:0,16,171	1/1:9,0:9:26.96:232,27,0	1/1:8,0:8:20.54:137,21,0	1/1:18,0:16:41.23:308,41,0	1/1:7,26:32:71.70:594,72,0	1/1:6,0:6:17.76:137,18,0	1/1:7,3:9:25.93:185,26,0	1/1:1,5:6:11.88:99,12,0	0/0:10,0:10:18.47:0,18,137	1/1:3,0:3:5.93:44,6,0	1/1:12,0:12:29.54:215,30,0	1/1:10,0:10:20.52:161,21,0	1/1:8,0:8:19.27:125,19,0	1/1:3,7:8:2.94:19,3,0	1/1:8,0:8:20.77:170,21,0	1/1:13,0:11:29.65:251,30,0	1/1:4,0:4:11.99:102,12,0	1/1:3,0:3:5.96:46,6,0	0/0:17,0:15:33.19:0,33,244	1/1:6,1:7:20.09:142,20,0	./.	0/0:8,0:7:14.94:0,15,123	1/1:4,11:13:29.48:222,29,0	1/1:5,0:5:11.82:83,12,0	1/1:11,0:11:26.83:198,27,0
chr10	13965154	.	C	CT	1220.56	PASS	AC=40;AF=0.769;AN=52;BaseQRankSum=0.121;DP=261;FS=5.866;HRun=0;HaplotypeScore=29.4733;InbreedingCoeff=0.6824;MQ=60.00;MQ0=11;MQRankSum=-5.082;QD=8.84;ReadPosRankSum=-1.687;VQSLOD=1.7959;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:34:93.26:0,93,1264	./.	0/0:16,0:15:39.10:0,39,515	0/0:21,0:18:51.14:0,51,659	1/1:0,5:5:8.84:55,9,0	1/1:10,0:10:16.58:139,17,0	1/1:0,8:8:2.94:18,3,0	1/1:12,0:10:26.82:203,27,0	1/1:10,0:9:17.79:124,18,0	1/1:3,0:3:8.91:61,9,0	1/1:0,11:11:5.91:38,6,0	0/0:22,0:18:51.17:0,51,698	1/1:4,0:4:2.96:19,3,0	1/1:5,0:2:2.94:18,3,0	1/1:0,10:10:2.94:18,3,0	1/1:7,0:5:11.78:73,12,0	1/1:12,0:11:23.68:159,24,0	1/1:8,0:7:14.88:109,15,0	1/1:3,0:3:8.93:64,9,0	1/1:1,5:5:8.92:66,9,0	./.	0/0:5,0:4:9.03:0,9,126	1/1:0,4:4:5.98:60,6,0	1/1:8,0:8:3:25,3,0	0/0:12,0:12:36.07:0,36,469	1/1:4,0:4:8.94:66,9,0	1/1:1,5:5:3.01:42,3,0	1/1:2,0:2:5.93:40,6,0
chr10	13966438	.	T	TC	1145.18	PASS	AB=0.792;AC=20;AF=0.357;AN=56;BaseQRankSum=9.105;DP=327;FS=107.075;HRun=2;HaplotypeScore=81.7289;InbreedingCoeff=-0.3612;MQ=41.71;MQ0=24;MQRankSum=-4.487;QD=5.11;ReadPosRankSum=0.597;VQSLOD=-0.4613;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:30.10:0,30,389	0/0:7,0:5:6.01:0,6,66	0/0:31,0:4:11.39:0,11,102	0/1:31,1:10:18.78:27,0,19	0/1:6,2:8:0.36:26,0,0	0/0:6,0:6:12.04:0,12,151	0/0:10,0:9:15.01:0,15,173	0/1:11,3:14:99:121,0,197	0/1:3,6:9:10.92:50,0,11	0/1:14,2:15:79.20:214,0,79	1/1:8,1:9:11.37:81,11,0	0/0:10,0:10:24.04:0,24,292	0/1:8,2:10:26.90:64,0,27	0/1:8,0:7:10.99:11,0,166	0/1:3,6:9:23.86:89,0,24	0/1:6,4:8:69.15:69,0,133	0/1:12,5:17:99:180,0,110	0/1:7,2:8:82.45:82,0,93	0/1:10,3:13:74.99:75,0,294	0/1:9,1:10:13.86:14,0,168	0/1:2,5:7:21.62:51,0,22	0/0:11,0:11:24.07:0,24,303	0/1:7,2:5:29.69:54,0,30	0/1:3,2:5:23.75:51,0,24	0/0:10,0:10:15.05:0,15,194	0/1:10,1:11:21.72:22,0,245	0/1:7,5:10:25.35:25,0,173	0/0:5,0:5:12.03:0,12,143
chr10	13966441	.	G	GAAAAAA	5357.78	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=3.127;DP=379;FS=11.562;HRun=15;HaplotypeScore=126.4565;InbreedingCoeff=0.8253;MQ=41.10;MQ0=24;MQRankSum=-5.155;QD=22.05;ReadPosRankSum=-0.578;VQSLOD=1.3165;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:13:23.38:0,23,374	1/1:7,1:6:8.97:139,9,0	0/0:37,0:5:11.14:0,11,105	0/0:43,0:10:20.05:0,20,217	1/1:11,1:12:17.96:304,18,0	1/1:6,1:9:21.07:519,21,0	1/1:9,0:9:6.02:144,6,0	1/1:16,0:16:15.83:217,16,0	1/1:10,0:10:14.97:268,15,0	1/1:19,0:18:27.44:416,27,0	1/1:12,0:11:15.44:294,15,0	0/0:11,0:11:14.58:0,15,241	1/1:10,0:10:8.95:117,9,0	1/1:6,2:8:15.02:353,15,0	1/1:6,0:6:8.90:61,9,0	1/1:9,1:8:11.91:150,12,0	1/1:19,0:21:38.60:591,39,0	1/1:7,1:8:14.97:234,15,0	1/1:12,1:13:23.89:307,24,0	1/1:11,0:13:14.54:265,15,0	1/1:6,0:6:13.59:74,14,0	0/0:12,0:13:11.44:0,11,265	1/1:10,0:6:9.86:120,10,0	1/1:4,1:5:6.32:105,6,0	0/0:13,0:14:7.36:0,7,99	1/1:14,0:14:12.02:214,12,0	1/1:15,0:13:17.89:314,18,0	1/1:5,0:6:6.02:153,6,0
chr10	13966473	.	CT	C	912.17	PASS	AB=0.887;AC=17;AF=0.315;AN=54;BaseQRankSum=-2.312;DP=369;FS=0.000;HRun=14;HaplotypeScore=60.3134;InbreedingCoeff=0.4187;MQ=76.01;MQ0=7;MQRankSum=0.367;QD=5.27;ReadPosRankSum=0.956;VQSLOD=1.9484;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,13:17:35.66:246,36,0	0/1:5,0:5:14.98:15,0,21	0/1:75,0:21:11.51:12,0,114	0/0:80,4:30:16.25:0,16,153	0/0:11,0:11:26.75:0,27,227	1/1:6,3:9:14.59:94,15,0	1/1:3,2:5:8.91:62,9,0	0/1:13,1:14:20.01:20,0,118	0/0:6,0:6:12.01:0,12,111	0/0:12,0:14:19.96:0,20,191	0/0:9,1:9:3.78:0,4,172	1/1:4,8:12:23.75:164,24,0	0/0:2,0:2:4.82:0,5,33	0/0:5,0:4:3:0,3,28	0/1:1,1:2:14.56:15,0,22	0/0:3,0:3:6.01:0,6,55	0/0:9,0:9:12.46:0,12,105	0/0:8,0:8:6.01:0,6,56	0/0:9,0:9:14.84:0,15,108	0/0:7,0:7:17.94:0,18,156	./.	1/1:2,8:11:25.71:164,26,0	0/0:11,0:11:20.39:0,20,175	0/0:3,0:3:6.01:0,6,56	1/1:4,12:17:43.60:290,44,0	0/1:4,1:5:11.57:12,0,47	0/0:6,0:6:6.48:0,6,56	0/0:4,0:4:3:0,3,28
chr10	13966504	.	A	AC	3205.60	PASS	AB=0.664;AC=37;AF=0.661;AN=56;BaseQRankSum=-4.767;DP=331;FS=0.000;HRun=9;HaplotypeScore=52.6955;InbreedingCoeff=0.2480;MQ=80.85;MQ0=1;MQRankSum=-1.711;QD=13.58;ReadPosRankSum=0.334;VQSLOD=3.0823;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,1:20:14.75:0,15,350	1/1:1,5:6:15.04:166,15,0	0/0:27,1:18:2.86:0,3,147	0/1:37,0:24:20:20,0,149	0/1:4,8:13:1.77:208,0,2	1/1:1,2:5:8.86:81,9,0	1/1:6,0:6:5.99:49,6,0	1/1:9,9:18:24.06:264,24,0	1/1:5,7:12:20.94:207,21,0	1/1:5,13:18:33.09:365,33,0	0/1:5,8:13:34.06:114,0,34	0/0:21,0:21:53.92:0,54,459	1/1:2,5:7:15.51:167,16,0	1/1:2,4:5:5.98:53,6,0	1/1:1,3:4:12.02:125,12,0	1/1:2,1:3:3.01:33,3,0	0/1:5,4:9:7.75:126,0,8	1/1:0,8:8:18.05:199,18,0	0/1:2,4:6:10.99:112,0,11	1/1:4,8:12:21.05:224,21,0	0/1:1,4:5:14.04:79,0,14	0/0:10,0:11:19.99:0,20,159	0/1:4,6:10:27.02:115,0,27	0/1:3,3:6:17.02:57,0,17	0/0:15,0:15:29.96:0,30,257	1/1:1,9:10:21.03:221,21,0	0/1:4,5:10:2.17:180,0,2	1/1:1,7:8:21:218,21,0
chr10	13967768	.	CA	C	6926.76	PASS	AB=0.818;AC=43;AF=0.768;AN=56;BaseQRankSum=7.838;DP=665;FS=0.838;HRun=10;HaplotypeScore=152.2534;InbreedingCoeff=0.8896;MQ=55.86;MQ0=15;MQRankSum=-7.340;QD=15.32;ReadPosRankSum=2.243;VQSLOD=3.6015;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,1:44:88.10:0,88,1158	1/1:9,1:10:19.46:131,19,0	0/0:53,0:25:31.92:0,32,269	0/0:63,1:27:17.99:0,18,184	1/1:18,8:28:60.86:479,61,0	1/1:15,6:19:49.92:358,50,0	1/1:4,12:17:32.44:262,32,0	1/1:3,16:15:44.65:372,45,0	1/1:14,1:16:36.34:219,36,0	1/1:17,11:28:29.57:430,30,0	1/1:12,8:20:56.02:400,56,0	0/0:14,0:14:35.99:0,36,380	1/1:14,4:18:24.55:192,25,0	1/1:14,5:19:40.49:262,40,0	1/1:19,9:30:69.09:504,69,0	1/1:10,8:18:20.76:233,21,0	1/1:10,15:25:58.94:481,59,0	1/1:11,10:19:44.80:366,45,0	0/1:14,4:13:0.63:174,0,1	1/1:15,16:32:14.18:549,14,0	1/1:8,6:11:19.55:160,20,0	0/0:14,0:13:33.09:0,33,363	1/1:6,7:14:34.91:277,35,0	1/1:15,6:18:32.25:252,32,0	0/0:22,0:22:57.15:0,57,630	1/1:9,9:19:0.39:211,0,0	1/1:13,8:21:55.34:414,55,0	1/1:13,2:16:28.72:198,29,0
chr10	13967775	.	A	AAAC	11597.03	PASS	AB=0.784;AC=30;AF=0.536;AN=56;BaseQRankSum=11.389;DP=643;FS=33.141;HRun=0;HaplotypeScore=152.8928;InbreedingCoeff=0.0006;MQ=55.54;MQ0=11;MQRankSum=-9.929;QD=25.49;ReadPosRankSum=-2.279;VQSLOD=2.9251;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:41:92.97:0,93,1596	1/1:4,4:9:4.36:336,4,0	0/0:36,0:18:33.61:0,34,299	0/0:58,0:23:23.86:0,24,251	0/1:15,12:29:24.56:794,0,25	1/1:12,9:21:9.60:695,10,0	0/1:17,1:18:98.93:212,0,99	0/1:17,0:16:79.91:136,0,80	1/1:8,9:16:21.78:736,22,0	0/1:20,9:29:99:814,0,106	1/1:10,8:22:16.56:791,17,0	0/0:13,0:13:38.94:0,39,511	0/1:8,5:15:6.20:478,0,6	1/1:8,9:18:21.89:699,22,0	1/1:21,10:33:58.79:1018,59,0	0/1:12,5:17:89.56:314,0,90	0/1:19,5:24:74.32:495,0,74	0/1:17,3:19:51.07:422,0,51	0/1:14,5:15:52.36:357,0,52	0/1:24,7:31:99:655,0,213	0/1:12,1:11:45.68:46,0,88	0/0:16,0:15:45.12:0,45,628	1/1:11,3:14:20.05:311,20,0	0/1:10,9:18:33.10:334,0,33	0/0:23,0:22:66.20:0,66,949	0/1:12,5:17:99:367,0,114	0/1:12,11:23:3.54:884,0,4	1/1:8,6:18:30.50:705,30,0
chr10	13967782	.	AC	A	4398.99	PASS	AB=0.842;AC=22;AF=0.393;AN=56;BaseQRankSum=11.170;DP=617;FS=93.492;HRun=1;HaplotypeScore=151.9168;InbreedingCoeff=-0.6312;MQ=50.53;MQ0=9;MQRankSum=-12.779;QD=9.52;ReadPosRankSum=7.149;VQSLOD=1.1083;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:38:98.37:0,98,1626	0/1:8,1:9:22.42:115,0,22	0/0:22,0:13:31.04:0,31,326	0/0:37,2:16:6.69:0,7,280	0/1:20,10:30:99:342,0,258	0/1:16,6:21:99:178,0,106	0/1:13,2:15:99:116,0,240	0/1:20,5:21:99:175,0,470	0/1:10,6:16:5.10:298,0,5	0/1:28,3:30:99:380,0,369	0/1:16,6:22:99:259,0,187	0/0:13,0:13:35.89:0,36,506	0/1:11,5:15:52.70:224,0,53	0/1:18,3:20:57.64:218,0,58	0/1:29,4:33:99:262,0,273	0/1:17,0:17:99:104,0,198	0/1:24,0:24:82.82:83,0,356	0/1:13,6:18:93.18:93,0,242	0/1:15,7:17:99:273,0,198	0/1:24,6:30:99:234,0,498	0/1:16,0:14:73.61:74,0,193	0/0:17,0:16:46.69:0,47,670	0/1:10,5:15:94.19:94,0,235	0/1:15,6:19:95.08:95,0,169	0/0:23,0:22:66.22:0,66,1005	0/1:15,2:17:99:121,0,304	0/1:22,0:22:99:234,0,102	0/1:8,10:18:23.87:429,0,24
chr10	13967783	.	C	CAAA	13191.56	PASS	AB=0.741;AC=24;AF=0.429;AN=56;BaseQRankSum=10.280;DP=622;FS=94.020;HRun=3;HaplotypeScore=139.1937;InbreedingCoeff=-0.4715;MQ=51.14;MQ0=9;MQRankSum=-12.773;QD=28.19;ReadPosRankSum=6.684;VQSLOD=0.7226;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:39:99:0,111,1669	0/1:2,7:9:15.60:370,0,16	0/0:23,0:14:22.95:0,23,233	0/0:37,0:15:23.30:0,23,273	0/1:18,12:30:99:987,0,152	0/1:14,9:21:62.21:693,0,62	0/1:13,2:15:99:221,0,241	0/1:25,0:21:99:222,0,324	1/1:7,9:16:8.50:826,8,0	0/1:17,15:33:99:1156,0,250	0/1:14,8:22:99:833,0,110	0/0:13,0:13:33.08:0,33,479	0/1:11,5:15:69.18:610,0,69	1/1:12,9:20:5.58:751,6,0	0/1:13,20:33:86.81:940,0,87	0/1:8,9:17:99:430,0,156	0/1:13,9:23:99:460,0,255	0/1:14,3:16:99:322,0,182	0/1:18,5:18:99:505,0,153	0/1:23,7:30:99:774,0,388	0/1:7,10:15:99:122,0,159	0/0:17,0:16:48.12:0,48,718	0/1:12,3:15:91.48:266,0,91	0/1:12,9:19:99:336,0,191	0/0:23,0:22:66.21:0,66,1024	0/1:12,5:17:99:456,0,246	0/1:11,15:25:85.04:956,0,85	0/1:12,6:18:6.85:956,0,7
chr10	13968423	.	GGA	G	9457.46	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=10.640;DP=389;FS=9.520;HRun=0;HaplotypeScore=66.2750;InbreedingCoeff=0.9851;MQ=64.76;MQ0=0;MQRankSum=-3.725;QD=36.66;ReadPosRankSum=3.107;VQSLOD=6.4726;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,99,1782	1/1:0,3:3:9.03:129,9,0	0/0:17,0:15:42.13:0,42,718	0/0:14,0:12:36.12:0,36,608	1/1:1,15:16:39.09:535,39,0	0/0:14,0:14:42.10:0,42,696	0/0:17,0:17:48.15:0,48,849	1/1:0,17:17:51.13:675,51,0	1/1:0,8:8:21.07:301,21,0	1/1:2,7:9:21.03:278,21,0	1/1:1,10:11:27.09:387,27,0	0/0:14,0:14:42.14:0,42,766	1/1:0,11:11:27.09:387,27,0	1/1:1,10:11:27.09:386,27,0	1/1:1,13:14:30.10:430,30,0	1/1:1,14:15:39.13:559,39,0	1/1:0,13:13:36.12:516,36,0	1/1:0,12:12:27.09:386,27,0	1/1:0,11:11:33.11:472,33,0	1/1:0,15:15:45.11:622,45,0	1/1:1,21:22:54.18:774,54,0	0/0:9,0:9:27.08:0,27,458	1/1:0,14:14:36.12:516,36,0	1/1:0,20:20:45.15:645,45,0	0/0:10,0:10:27.09:0,27,495	1/1:1,15:16:45.15:645,45,0	1/1:0,14:14:42.14:602,42,0	1/1:0,6:6:15.05:215,15,0
chr10	13968524	.	G	GA	2055.16	PASS	AB=0.807;AC=34;AF=0.654;AN=52;BaseQRankSum=-1.300;DP=277;FS=14.883;HRun=11;HaplotypeScore=124.9905;InbreedingCoeff=0.4104;MQ=48.42;MQ0=11;MQRankSum=-1.094;QD=10.17;ReadPosRankSum=-0.449;VQSLOD=1.1019;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:29.86:0,30,232	./.	0/0:12,0:1:1.82:0,2,5	0/0:21,0:4:4.52:0,5,27	0/1:9,4:14:12.09:105,0,12	0/0:4,0:4:2.99:0,3,23	0/0:7,0:7:2.98:0,3,23	1/1:7,4:11:6.48:62,6,0	1/1:6,6:11:9.02:91,9,0	1/1:8,1:7:11.93:101,12,0	0/1:9,1:10:9.36:53,0,9	0/0:7,0:7:8.94:0,9,70	1/1:4,0:4:5.97:50,6,0	1/1:11,0:11:13.50:104,14,0	1/1:7,7:14:29.98:282,30,0	1/1:7,6:13:27.05:274,27,0	0/1:5,5:9:31.37:65,0,31	1/1:10,4:14:21.01:204,21,0	0/1:12,2:14:14.04:52,0,14	1/1:6,2:8:3.01:30,3,0	1/1:3,5:8:6.48:62,6,0	./.	1/1:4,3:6:11.97:110,12,0	1/1:6,0:6:2.96:20,3,0	0/0:5,0:5:11.85:0,12,86	1/1:13,3:15:9.90:94,10,0	1/1:5,10:15:32.96:311,33,0	1/1:0,6:6:15.03:152,15,0
chr10	13969639	.	GAA	G	9127.27	PASS	AB=0.926;AC=41;AF=0.732;AN=56;BaseQRankSum=0.305;DP=593;FS=3.991;HRun=12;HaplotypeScore=88.6897;InbreedingCoeff=0.9029;MQ=66.37;MQ0=3;MQRankSum=-0.732;QD=20.89;ReadPosRankSum=4.783;VQSLOD=4.5619;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:51:99:0,131,1814	1/1:0,4:4:12.03:122,12,0	0/1:23,0:20:15.75:16,0,232	0/0:24,0:25:25.91:0,26,278	1/1:3,20:23:54.08:549,54,0	0/0:1,0:18:40.44:0,40,176	0/0:5,0:19:37.94:0,38,168	1/1:10,28:38:74.63:784,75,0	1/1:0,14:14:33.07:336,33,0	1/1:5,11:16:32.81:317,33,0	1/1:1,19:20:26.97:274,27,0	0/0:15,0:15:36.08:0,36,463	1/1:2,9:12:20.77:266,21,0	1/1:0,18:19:56.87:561,57,0	1/1:5,27:32:69.02:701,69,0	1/1:2,22:24:59.84:592,60,0	1/1:2,20:22:54.11:549,54,0	1/1:3,15:18:36:366,36,0	1/1:6,21:29:26.53:585,27,0	1/1:3,16:19:18.39:345,18,0	1/1:3,14:17:24.08:324,24,0	0/0:15,0:15:33.01:0,33,392	1/1:2,14:16:29.61:304,30,0	1/1:3,23:26:43.39:591,43,0	0/0:11,0:12:29.58:0,30,380	1/1:2,15:17:48.08:480,48,0	1/1:3,30:33:71.49:731,71,0	1/1:0,12:12:33.08:336,33,0
chr10	13972143	.	A	AGGCATATACCGTG	28164.96	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-9.573;DP=401;FS=21.286;HRun=0;HaplotypeScore=117.0634;InbreedingCoeff=0.8578;MQ=91.11;MQ0=0;MQRankSum=-12.374;QD=102.42;ReadPosRankSum=3.767;VQSLOD=3.2069;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,114,4216	1/1:5,0:5:9.03:544,9,0	0/0:23,0:23:63.20:0,63,1674	0/0:19,0:19:47.58:0,48,1453	1/1:8,0:8:5.12:439,5,0	1/1:3,12:18:42.14:2448,42,0	1/1:10,11:31:27.05:1560,27,0	1/1:19,0:19:48.12:1647,48,0	1/1:13,0:13:27.09:1627,27,0	1/1:10,0:10:30.10:1619,30,0	1/1:6,0:6:2.53:181,3,0	0/0:23,0:23:66.17:0,66,2355	1/1:10,0:10:15.05:883,15,0	1/1:16,0:16:39.13:2325,39,0	1/1:16,0:16:33.11:1979,33,0	1/1:21,0:21:45.15:2709,45,0	1/1:6,0:6:6.02:359,6,0	1/1:6,0:5:6.02:360,6,0	1/1:14,0:14:33.11:1472,33,0	1/1:9,0:9:15.05:903,15,0	1/1:14,0:14:12.04:590,12,0	0/0:6,0:6:18.06:0,18,606	1/1:5,0:5:9.03:355,9,0	1/1:7,0:7:15.05:890,15,0	0/0:9,0:9:24.08:0,24,790	1/1:16,0:16:45.15:2058,45,0	1/1:19,0:18:45.15:2653,45,0	1/1:6,0:6:12.01:562,12,0
chr10	13972147	.	A	ATATACCGTGGGCT	33437.82	PASS	AB=1.000;AC=42;AF=0.750;AN=56;BaseQRankSum=-10.099;DP=468;FS=31.794;HRun=0;HaplotypeScore=122.2168;InbreedingCoeff=0.7203;MQ=86.11;MQ0=0;MQRankSum=-12.012;QD=98.35;ReadPosRankSum=3.653;VQSLOD=2.8981;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,117,4425	1/1:0,5:5:9.03:600,9,0	0/0:24,0:24:72.12:0,72,1865	0/0:18,0:18:47.60:0,48,1592	1/1:5,4:9:9.07:525,9,0	0/1:20,0:20:26.60:2147,0,27	0/1:18,0:18:15:1403,0,15	1/1:0,7:26:75.13:2622,75,0	1/1:2,10:18:26.38:1797,26,0	1/1:0,9:14:42.14:2248,42,0	1/1:4,2:6:3.01:200,3,0	0/0:23,0:23:69.18:0,69,2504	1/1:1,7:22:13.80:974,14,0	1/1:0,13:20:39.13:2579,39,0	1/1:1,13:26:32.52:2198,33,0	1/1:0,17:23:45.15:2999,45,0	1/1:0,3:9:6.02:400,6,0	1/1:1,5:7:9.03:601,9,0	1/1:0,7:17:45.15:2130,45,0	1/1:0,6:7:15.05:999,15,0	1/1:5,5:21:18.06:1068,18,0	0/0:7,0:7:21.06:0,21,650	1/1:5,1:6:12.03:434,12,0	1/1:0,4:11:15.05:987,15,0	0/0:10,0:10:27.08:0,27,844	1/1:1,11:24:69.19:2941,69,0	1/1:3,15:23:41.62:2942,42,0	1/1:1,4:6:12.04:643,12,0
chr10	13972231	.	ATTTT	A	4202.77	PASS	AB=0.636;AC=43;AF=0.768;AN=56;BaseQRankSum=7.306;DP=308;FS=0.583;HRun=16;HaplotypeScore=70.0340;InbreedingCoeff=0.7181;MQ=67.87;MQ0=3;MQRankSum=-7.528;QD=20.60;ReadPosRankSum=4.374;VQSLOD=2.1397;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:42:84.11:0,84,1470	1/1:0,3:3:6.02:79,6,0	0/0:15,0:10:8.45:0,8,92	0/0:13,0:11:20.53:0,21,268	1/1:3,5:7:11.99:158,12,0	1/1:11,7:18:26.73:319,27,0	1/1:4,4:9:13.17:161,13,0	1/1:9,9:19:26.88:379,27,0	1/1:3,7:10:18.02:237,18,0	1/1:3,6:10:22.22:272,22,0	1/1:2,3:4:2.91:39,3,0	0/0:14,0:15:36.12:0,36,664	1/1:7,4:12:8.99:118,9,0	1/1:2,5:7:15.05:197,15,0	1/1:4,8:13:23.56:315,24,0	1/1:1,6:7:21.07:275,21,0	1/1:2,4:7:13.28:161,13,0	1/1:1,4:5:8.98:118,9,0	1/1:9,10:19:31.01:396,31,0	0/1:3,4:7:6.27:173,0,6	1/1:6,1:7:2.96:39,3,0	0/0:4,0:8:21.07:0,21,352	1/1:1,2:3:2.94:39,3,0	1/1:3,1:4:3.01:39,3,0	0/0:6,0:9:24.08:0,24,460	1/1:5,9:14:23.97:309,24,0	1/1:3,7:11:20.99:264,21,0	1/1:1,3:4:9.03:113,9,0
chr10	13972250	.	TTC	T	610.27	PASS	AB=0.981;AC=24;AF=0.429;AN=56;BaseQRankSum=1.693;DP=315;FS=5.354;HRun=0;HaplotypeScore=70.5735;InbreedingCoeff=-0.3834;MQ=41.89;MQ0=23;MQRankSum=-1.739;QD=2.57;ReadPosRankSum=3.791;VQSLOD=1.0857;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:38:41.43:0,41,767	0/0:4,0:4:1.03:0,1,32	0/0:6,0:2:0.42:0,0,18	0/1:9,0:7:13.36:13,0,37	0/1:10,1:9:11.23:11,0,64	0/1:13,0:12:49.58:50,0,59	0/1:14,0:12:25.21:67,0,25	0/1:13,0:12:0.09:0,0,102	0/1:9,1:10:12.75:13,0,30	0/1:14,0:14:50.22:50,0,65	0/1:9,1:8:6.44:98,0,6	0/0:11,0:11:22.23:0,22,233	0/1:14,0:14:7.69:91,0,8	0/1:6,0:6:19.01:29,0,19	0/1:12,0:11:33.88:34,0,71	0/1:15,1:15:48.67:49,0,94	0/1:9,0:8:9.61:10,0,44	1/1:8,0:6:0.88:20,1,0	0/1:16,0:15:17.59:18,0,157	0/1:8,0:7:1.92:2,0,50	0/1:4,0:2:4.63:5,0,11	0/0:7,0:7:13.64:0,14,123	1/1:7,1:8:14.40:102,14,0	0/1:4,0:3:1.29:1,0,4	0/0:10,0:9:23.68:0,24,264	0/1:17,1:16:46.88:47,0,76	0/1:12,0:10:26.35:43,0,26	0/1:8,0:4:3.72:4,0,12
chr10	13972852	.	T	TAGA	29752	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-12.488;DP=667;FS=4.109;HRun=0;HaplotypeScore=84.8963;InbreedingCoeff=0.9932;MQ=89.38;MQ0=0;MQRankSum=-7.487;QD=57.44;ReadPosRankSum=2.623;VQSLOD=7.1100;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:81.26:0,81,1354	1/1:1,8:9:24.08:553,24,0	0/0:24,0:24:60.20:0,60,999	0/0:31,0:31:90.21:0,90,1390	1/1:2,20:22:57.01:1313,57,0	1/1:4,20:24:57.11:1215,57,0	1/1:2,20:22:51.17:1175,51,0	1/1:7,27:35:99:2172,99,0	1/1:0,21:21:48.16:1107,48,0	1/1:9,22:31:88.45:1868,88,0	1/1:4,19:23:54.06:1097,54,0	0/0:26,0:26:75.26:0,75,1275	1/1:1,23:25:69.19:1513,69,0	1/1:3,19:22:15.06:1370,15,0	1/1:3,26:30:84.20:1808,84,0	1/1:2,29:31:81.28:1809,81,0	1/1:4,17:21:51.17:1161,51,0	1/1:1,25:26:69.24:1591,69,0	1/1:4,17:22:57.20:1292,57,0	1/1:1,20:23:63.09:1305,63,0	1/1:3,30:33:75.17:1631,75,0	0/0:20,0:20:60.21:0,60,1016	1/1:3,19:22:57.11:1215,57,0	1/1:3,14:17:36.04:731,36,0	0/0:20,0:20:57.19:0,57,972	1/1:6,25:32:93.27:2035,93,0	1/1:1,20:22:63.22:1445,63,0	1/1:0,5:5:15.05:346,15,0
chr10	13974601	.	G	GA	5231.55	PASS	AB=0.661;AC=36;AF=0.643;AN=56;BaseQRankSum=-7.585;DP=630;FS=9.357;HRun=13;HaplotypeScore=70.3952;InbreedingCoeff=0.2195;MQ=54.95;MQ0=12;MQRankSum=0.003;QD=9.98;ReadPosRankSum=-1.603;VQSLOD=3.1329;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:49.53:0,50,335	0/1:2,2:5:11.73:33,0,12	0/1:13,0:6:6.67:7,0,21	0/0:7,0:4:5.95:0,6,19	1/1:7,14:22:33.70:351,34,0	0/1:9,12:22:43.45:198,0,43	0/1:7,14:23:22.30:249,0,22	1/1:12,11:23:6.37:186,6,0	0/1:7,13:20:13.57:173,0,14	1/1:9,12:22:15.84:159,16,0	1/1:6,10:14:3.66:173,4,0	0/0:31,0:33:58.39:0,58,396	0/1:8,13:20:11.11:192,0,11	0/1:8,13:22:2.25:201,0,2	1/1:13,19:33:21.25:317,21,0	1/1:9,20:30:26.09:261,26,0	0/1:12,30:41:58.43:403,0,58	0/1:9,13:24:50.49:208,0,50	1/1:11,5:15:14.23:117,14,0	1/1:6,16:23:32.12:400,32,0	1/1:6,11:16:12.01:112,12,0	0/0:9,0:10:28.79:0,29,190	1/1:5,10:16:23.86:209,24,0	1/1:8,28:38:26.92:552,27,0	0/0:19,0:24:34.85:0,35,208	0/1:12,16:29:5.97:260,0,6	1/1:7,21:31:23.15:364,23,0	1/1:4,6:10:8.17:106,8,0
chr10	13976749	.	T	TAAA	11081.42	PASS	AB=0.923;AC=45;AF=0.804;AN=56;BaseQRankSum=-5.891;DP=517;FS=6.907;HRun=11;HaplotypeScore=74.3004;InbreedingCoeff=0.8450;MQ=63.96;MQ0=1;MQRankSum=-4.946;QD=28.41;ReadPosRankSum=1.276;VQSLOD=3.8689;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:83.90:0,84,947	1/1:3,6:9:15.05:280,15,0	0/0:10,0:10:10.38:0,10,87	0/1:11,0:12:31.97:32,0,81	1/1:4,6:13:18.04:305,18,0	1/1:1,17:21:42.12:742,42,0	1/1:6,16:23:33.07:584,33,0	1/1:7,6:13:18.05:264,18,0	1/1:3,7:10:15.05:282,15,0	1/1:3,12:18:39.11:652,39,0	1/1:4,13:17:27.04:457,27,0	0/0:26,0:27:47.65:0,48,510	1/1:1,10:12:24.06:417,24,0	1/1:6,14:22:30.08:530,30,0	1/1:1,15:17:42.12:755,42,0	1/1:7,16:26:54.10:881,54,0	1/1:5,20:30:48.12:812,48,0	1/1:2,14:19:42.11:741,42,0	1/1:4,6:11:22.26:317,22,0	1/1:4,15:20:39.06:625,39,0	1/1:4,6:9:9.03:169,9,0	0/0:28,0:28:56.99:0,57,666	1/1:2,6:8:12.04:225,12,0	1/1:5,16:22:27.09:508,27,0	0/0:20,0:21:44.92:0,45,488	1/1:5,18:26:54.15:890,54,0	1/1:3,11:16:18.06:307,18,0	1/1:3,8:12:18.04:305,18,0
chr10	13976904	.	T	TGA	5653.94	PASS	AB=0.641;AC=29;AF=0.518;AN=56;BaseQRankSum=13.412;DP=486;FS=11.407;HRun=0;HaplotypeScore=127.0642;InbreedingCoeff=0.1456;MQ=65.40;MQ0=4;MQRankSum=-13.507;QD=20.05;ReadPosRankSum=4.620;VQSLOD=4.8520;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,123,1839	0/1:1,2:3:14.80:55,0,15	0/0:21,0:18:54.16:0,54,794	0/0:35,0:30:90.26:0,90,1309	1/1:4,12:17:2.94:373,3,0	0/0:19,0:17:19.24:0,19,196	0/0:20,0:20:29.48:0,29,328	0/1:10,7:17:98.87:239,0,99	1/1:3,11:14:32.65:359,33,0	1/1:3,12:15:36.58:434,37,0	1/1:0,8:8:24.07:270,24,0	0/0:22,0:22:63.20:0,63,943	0/1:5,10:15:26.29:272,0,26	0/1:4,8:11:8.30:262,0,8	0/1:8,14:22:56.18:442,0,56	0/1:9,17:26:32.10:552,0,32	0/1:12,13:25:99:356,0,128	1/1:4,11:15:2.45:383,2,0	0/1:11,5:15:99:198,0,114	1/1:1,6:7:7.26:164,7,0	0/1:6,6:11:10.94:166,0,11	0/0:22,0:22:60.10:0,60,864	1/1:5,3:8:7.28:99,7,0	1/1:4,10:14:7.66:247,8,0	0/0:18,0:18:48.16:0,48,733	0/1:5,12:17:20.17:392,0,20	0/1:6,7:13:50.03:233,0,50	1/1:0,5:5:14.96:155,15,0
chr10	13976906	.	T	TTGGG	12682.31	PASS	AB=0.639;AC=25;AF=0.446;AN=56;BaseQRankSum=15.721;DP=522;FS=19.674;HRun=0;HaplotypeScore=128.5908;InbreedingCoeff=-0.3830;MQ=62.15;MQ0=6;MQRankSum=-16.008;QD=35.33;ReadPosRankSum=6.323;VQSLOD=3.3538;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,123,2529	0/1:1,2:3:28.74:114,0,29	0/0:21,0:17:23.41:0,23,940	0/0:35,0:30:90.17:0,90,1690	0/1:7,11:20:73.39:768,0,73	0/1:7,0:18:99:517,0,122	0/1:10,0:20:99:493,0,324	0/1:15,7:22:99:587,0,249	0/1:3,10:14:62.24:592,0,62	1/1:5,12:17:8.46:876,8,0	1/1:5,8:12:33.11:676,33,0	0/0:24,0:24:63.20:0,63,1264	0/1:4,10:14:67.54:531,0,68	0/1:9,8:15:56.28:588,0,56	0/1:12,14:25:99:855,0,124	0/1:7,17:23:99:945,0,109	0/1:17,13:29:99:915,0,212	0/1:6,11:16:28.49:792,0,28	0/1:15,5:19:99:471,0,224	0/1:2,6:7:18.34:354,0,18	0/1:6,6:11:80.03:344,0,80	0/0:22,0:22:57.19:0,57,1139	0/1:3,3:6:28.25:177,0,28	0/1:3,10:13:17.20:436,0,17	0/0:18,0:18:48.16:0,48,975	0/1:11,12:22:99:931,0,118	0/1:5,7:12:99:415,0,111	1/1:1,6:6:15.05:305,15,0
chr10	13976979	.	G	GA	5031.57	PASS	AB=0.836;AC=44;AF=0.815;AN=54;BaseQRankSum=0.092;DP=468;FS=8.790;HRun=12;HaplotypeScore=72.9967;InbreedingCoeff=0.5316;MQ=50.70;MQ0=10;MQRankSum=-1.034;QD=12.36;ReadPosRankSum=-0.417;VQSLOD=4.0944;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:29,3:33:5.37:5,0,277	1/1:5,3:7:14.84:123,15,0	0/1:8,0:5:1.89:2,0,45	./.	1/1:4,7:11:21.02:199,21,0	0/1:10,0:14:1.82:66,0,2	1/1:3,3:20:35.04:231,35,0	1/1:6,10:16:23.13:236,23,0	1/1:6,5:9:12.02:117,12,0	0/1:10,8:19:7.95:223,0,8	1/1:7,11:18:32.21:343,32,0	0/0:26,0:25:41.58:0,42,303	1/1:4,6:11:15.75:133,16,0	1/1:11,13:22:41.81:379,42,0	1/1:15,10:25:20.09:336,20,0	1/1:9,7:17:32.72:289,33,0	1/1:8,19:26:35.19:502,35,0	1/1:5,5:10:1.86:146,2,0	1/1:11,11:18:24.04:233,24,0	1/1:14,3:16:18.57:142,19,0	1/1:5,7:12:21.86:191,22,0	0/0:15,0:16:13.78:0,14,91	1/1:7,8:13:5.40:212,5,0	1/1:11,6:17:10.70:217,11,0	0/0:13,0:16:24.70:0,25,155	1/1:9,3:11:2.09:169,2,0	1/1:7,15:24:23.26:419,23,0	1/1:1,6:6:12.02:117,12,0
chr10	13977064	.	C	CCTG	20757.85	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-10.362;DP=519;FS=15.293;HRun=0;HaplotypeScore=69.8083;InbreedingCoeff=0.9954;MQ=71.92;MQ0=0;MQRankSum=-8.127;QD=54.06;ReadPosRankSum=1.961;VQSLOD=5.9775;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,114,1856	1/1:0,9:9:24.08:550,24,0	0/0:10,0:10:27.07:0,27,410	0/0:19,0:18:50.91:0,51,734	1/1:3,22:25:63.20:1406,63,0	1/1:0,17:17:45.15:1036,45,0	1/1:4,17:21:51.17:1110,51,0	1/1:2,20:25:75.11:1395,75,0	1/1:1,8:9:24.07:508,24,0	1/1:1,16:17:48.16:1107,48,0	1/1:1,15:16:48.06:1006,48,0	0/0:21,0:21:63.17:0,63,1043	1/1:0,18:18:48.16:1103,48,0	1/1:4,10:15:36.12:766,36,0	1/1:4,20:25:54:1080,54,0	1/1:4,17:21:54.18:1201,54,0	1/1:4,26:31:60.19:1337,60,0	1/1:1,16:16:42.14:968,42,0	1/1:1,10:14:36.03:634,36,0	1/1:2,13:15:42.14:966,42,0	1/1:2,13:16:33.11:756,33,0	0/0:27,0:27:81.25:0,81,1329	1/1:4,8:12:27.09:618,27,0	1/1:3,16:22:48.10:1053,48,0	0/0:20,0:20:60.15:0,60,966	1/1:1,17:18:48.16:1104,48,0	1/1:3,11:13:33.05:708,33,0	1/1:0,5:5:15.05:346,15,0
chr10	13977346	.	G	GA	18683.27	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=8.289;DP=683;FS=3.098;HRun=2;HaplotypeScore=88.0602;InbreedingCoeff=0.9996;MQ=85.88;MQ0=0;MQRankSum=-4.685;QD=39.09;ReadPosRankSum=2.453;VQSLOD=5.3690;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:90.28:0,90,1116	1/1:0,9:9:24.08:346,24,0	0/0:24,0:24:68.95:0,69,826	0/0:21,0:21:50.67:0,51,600	1/1:0,24:24:63.17:884,63,0	0/0:29,0:29:75.23:0,75,930	0/0:35,0:35:99:0,105,1276	1/1:0,37:37:99:1581,111,0	1/1:1,21:22:60.20:864,60,0	1/1:3,20:23:63.18:884,63,0	1/1:1,17:18:45.11:624,45,0	0/0:29,0:29:87.26:0,87,1060	1/1:2,19:21:57.19:819,57,0	1/1:2,19:22:63.21:900,63,0	1/1:2,27:29:72.24:1029,72,0	1/1:1,36:37:99:1505,105,0	1/1:0,34:34:90.30:1296,90,0	1/1:0,21:21:60.20:864,60,0	1/1:4,21:25:63.18:863,63,0	1/1:1,18:18:51.17:734,51,0	1/1:0,25:25:66.22:950,66,0	0/0:19,0:19:57.18:0,57,706	1/1:0,15:15:45.15:648,45,0	1/1:1,26:27:75.25:1080,75,0	0/0:15,0:15:45.14:0,45,557	1/1:0,18:18:54.17:759,54,0	1/1:1,34:35:99:1405,99,0	1/1:0,17:17:45.15:648,45,0
chr10	13978055	.	AG	A	18060.03	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=10.118;DP=733;FS=5.120;HRun=4;HaplotypeScore=73.0897;InbreedingCoeff=0.9904;MQ=76.71;MQ0=0;MQRankSum=-2.056;QD=31.91;ReadPosRankSum=3.163;VQSLOD=5.5478;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,135,1854	1/1:3,5:8:15.04:180,15,0	0/0:13,0:14:32.65:0,33,392	0/0:15,0:15:33.08:0,33,431	1/1:1,17:18:48.10:560,48,0	1/1:3,19:22:51.16:612,51,0	1/1:2,22:24:63.19:756,63,0	1/1:4,23:27:66.19:780,66,0	1/1:2,24:26:69.21:823,69,0	1/1:0,26:26:75.23:900,75,0	1/1:0,12:12:36.11:432,36,0	0/0:37,0:37:99:0,111,1553	1/1:1,23:24:66.20:790,66,0	1/1:1,25:26:72.22:864,72,0	1/1:0,58:58:99:1908,159,0	1/1:1,41:42:99:1440,120,0	1/1:1,18:19:57.17:682,57,0	1/1:1,25:26:69.21:828,69,0	1/1:3,18:21:54.14:632,54,0	1/1:5,21:26:63.18:744,63,0	1/1:1,31:32:90.28:1080,90,0	0/0:34,0:34:96.32:0,96,1342	1/1:1,17:18:39.59:469,40,0	1/1:0,38:38:99:1296,108,0	0/0:20,0:20:54.17:0,54,739	1/1:2,29:31:81.23:958,81,0	1/1:2,34:36:99:1185,99,0	1/1:0,6:6:12.04:144,12,0
chr10	13978059	.	GT	G	5093.27	PASS	AB=0.988;AC=38;AF=0.679;AN=56;BaseQRankSum=16.647;DP=742;FS=3.520;HRun=1;HaplotypeScore=118.8448;InbreedingCoeff=0.5163;MQ=76.48;MQ0=0;MQRankSum=-2.016;QD=8.87;ReadPosRankSum=6.955;VQSLOD=2.4978;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:48:99:0,147,2221	0/1:7,0:7:16.64:35,0,17	0/0:13,0:13:36.09:0,36,505	0/0:16,0:16:36.10:0,36,531	0/1:20,0:20:36.72:145,0,37	1/1:19,0:19:46.31:202,46,0	0/1:25,0:25:10.17:164,0,10	1/1:25,1:26:0.49:121,0,0	1/1:25,1:26:42.63:296,43,0	0/1:30,0:30:13.06:158,0,13	1/1:12,0:12:33.31:167,33,0	0/0:39,0:39:99:0,117,1808	1/1:25,1:26:16.92:232,17,0	1/1:26,0:26:43.25:277,43,0	1/1:61,0:61:97.23:533,97,0	1/1:44,0:44:39.26:363,39,0	1/1:19,1:20:30.79:220,31,0	1/1:26,0:26:40.86:238,41,0	1/1:19,0:19:43.97:184,44,0	0/1:23,2:25:1.85:251,0,2	1/1:32,0:32:80.53:335,81,0	0/0:33,0:33:99:0,99,1544	1/1:18,0:18:14.93:132,15,0	1/1:39,0:39:76.48:388,76,0	0/0:18,0:18:51.17:0,51,813	0/1:32,0:32:7.27:190,0,7	1/1:34,1:35:89.90:413,90,0	1/1:6,0:6:11.03:49,11,0
chr10	13978629	.	GT	G	1587.49	PASS	AB=0.927;AC=44;AF=0.786;AN=56;BaseQRankSum=11.142;DP=562;FS=4.401;HRun=12;HaplotypeScore=109.9184;InbreedingCoeff=0.7142;MQ=67.21;MQ0=2;MQRankSum=-2.568;QD=3.42;ReadPosRankSum=2.005;VQSLOD=1.1925;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:34,6:41:38.94:39,0,558	1/1:8,0:7:10.72:34,11,0	0/0:23,0:14:7.03:0,7,71	0/0:10,0:8:5.24:0,5,63	1/1:17,0:17:14.23:42,14,0	1/1:17,0:17:26.48:77,26,0	1/1:20,0:19:26.48:77,26,0	1/1:33,0:33:47.91:151,48,0	1/1:10,0:10:18.97:59,19,0	1/1:13,0:13:16.73:51,17,0	1/1:12,0:12:13.52:47,14,0	0/0:28,0:28:62.80:0,63,571	1/1:19,0:19:30.47:103,30,0	1/1:18,0:18:29.68:91,30,0	1/1:22,0:22:22.85:66,23,0	1/1:26,0:25:31.62:97,32,0	1/1:35,0:35:49.76:154,50,0	1/1:16,0:16:20.78:66,21,0	1/1:18,0:17:28.96:94,29,0	1/1:16,0:16:18.95:59,19,0	1/1:30,0:30:30.53:89,31,0	0/0:20,0:20:45.52:0,46,434	1/1:20,0:20:22.84:69,23,0	1/1:23,0:23:34.63:101,35,0	0/0:16,0:16:6.32:0,6,199	0/1:16,0:16:4.71:42,0,5	1/1:21,0:20:34.03:108,34,0	1/1:13,0:13:14.26:42,14,0
chr10	13978638	.	TTTTC	T	4129.18	PASS	AB=0.982;AC=41;AF=0.732;AN=56;BaseQRankSum=12.038;DP=559;FS=2.287;HRun=0;HaplotypeScore=125.5422;InbreedingCoeff=0.7158;MQ=63.64;MQ0=3;MQRankSum=-2.704;QD=9.83;ReadPosRankSum=6.263;VQSLOD=2.4010;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,111,2329	1/1:8,0:7:10.54:67,11,0	0/0:22,0:12:27.01:0,27,365	0/0:11,0:5:12.04:0,12,200	1/1:16,0:16:21.55:115,22,0	1/1:18,0:18:36.93:187,37,0	1/1:19,0:18:36.93:186,37,0	1/1:33,2:35:53.82:456,54,0	1/1:9,2:11:25.99:211,26,0	1/1:9,0:9:24.67:124,25,0	1/1:15,0:15:10.16:62,10,0	0/0:25,0:25:75.24:0,75,1707	0/1:18,0:18:7.56:111,0,8	1/1:16,0:16:39.28:193,39,0	1/1:19,0:19:33.05:181,33,0	1/1:24,0:23:44.85:231,45,0	1/1:35,0:35:64.93:340,65,0	1/1:17,0:17:17.11:136,17,0	0/1:17,1:17:22.97:173,0,23	1/1:16,0:16:30.69:166,31,0	1/1:27,1:28:42.54:215,43,0	0/0:21,0:21:61.64:0,62,1279	1/1:20,0:20:30.98:157,31,0	1/1:25,1:26:48.46:283,48,0	0/0:17,0:17:38.23:0,38,861	0/1:18,0:18:43.40:163,0,43	1/1:19,2:20:35.14:271,35,0	1/1:13,0:13:19.89:100,20,0
chr10	13978639	.	TTTC	T	12417.27	PASS	AB=0.529;AC=43;AF=0.768;AN=56;BaseQRankSum=6.508;DP=551;FS=3.670;HRun=0;HaplotypeScore=86.0291;InbreedingCoeff=0.8837;MQ=63.79;MQ0=3;MQRankSum=-3.377;QD=29.99;ReadPosRankSum=4.921;VQSLOD=4.8478;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,104,1792	1/1:1,7:7:17.50:214,18,0	0/0:22,0:12:23.80:0,24,236	0/0:12,0:5:11.98:0,12,144	1/1:0,16:16:26.91:367,27,0	1/1:0,18:18:39.13:618,39,0	1/1:1,18:18:39.13:617,39,0	1/1:3,31:34:89.92:1093,90,0	1/1:2,9:11:27.07:371,27,0	1/1:0,9:9:27.04:380,27,0	1/1:1,13:14:17.39:227,17,0	0/0:26,0:26:78.13:0,78,1382	1/1:4,13:17:39.13:541,39,0	1/1:0,15:15:42.13:637,42,0	1/1:1,17:18:35.98:522,36,0	1/1:1,23:23:48.15:718,48,0	1/1:1,33:35:71.90:1083,72,0	1/1:1,16:17:12.74:481,13,0	1/1:5,13:17:41.99:513,42,0	1/1:0,16:16:35.97:467,36,0	1/1:1,26:27:45.13:713,45,0	0/0:20,0:20:60.06:0,60,1030	1/1:0,20:20:32.65:517,33,0	1/1:1,25:26:51.17:788,51,0	0/0:16,0:16:33.43:0,33,635	0/1:2,16:18:26.45:516,0,26	1/1:3,18:21:51.02:702,51,0	1/1:0,13:13:21.07:332,21,0
chr10	13978640	.	TTC	T	6280.54	PASS	AB=1.000;AC=43;AF=0.768;AN=56;BaseQRankSum=11.478;DP=546;FS=0.422;HRun=0;HaplotypeScore=98.3353;InbreedingCoeff=0.8117;MQ=63.85;MQ0=3;MQRankSum=-4.341;QD=15.24;ReadPosRankSum=4.182;VQSLOD=4.3679;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:96.72:0,97,1317	1/1:7,1:7:17.90:148,18,0	0/0:21,0:11:1.06:0,1,70	0/0:13,0:5:5.26:0,5,82	1/1:16,0:16:26.78:195,27,0	1/1:18,0:18:38.85:298,39,0	1/1:19,0:18:38.84:296,39,0	1/1:34,0:34:85.05:584,85,0	1/1:11,0:11:26.58:193,27,0	1/1:9,0:9:26.38:188,26,0	1/1:13,1:14:17.75:144,18,0	0/0:26,0:26:75.04:0,75,1037	1/1:14,2:17:40.91:333,41,0	1/1:15,0:15:41.55:303,42,0	1/1:18,0:18:33.24:251,33,0	1/1:24,0:23:47.58:349,48,0	1/1:35,0:35:71.39:531,71,0	1/1:17,0:17:30.28:236,30,0	1/1:16,0:15:38.59:231,39,0	1/1:16,0:16:35.46:252,35,0	1/1:27,0:27:44.82:344,45,0	0/0:19,0:19:57.03:0,57,785	1/1:20,0:20:32.79:247,33,0	1/1:26,0:26:50.79:388,51,0	0/0:15,0:15:8.49:0,8,424	0/1:18,0:18:13.33:249,0,13	1/1:21,0:20:49.99:362,50,0	1/1:13,0:13:20.92:160,21,0
chr10	13979744	.	G	GA	974.40	PASS	AB=0.950;AC=6;AF=0.107;AN=56;BaseQRankSum=-7.692;DP=616;FS=3.022;HRun=10;HaplotypeScore=64.9664;InbreedingCoeff=0.6315;MQ=60.88;MQ0=4;MQRankSum=0.270;QD=12.49;ReadPosRankSum=0.053;VQSLOD=3.3819;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:47:99:0,118,945	0/0:10,0:10:28.95:0,29,221	0/1:22,0:14:10.11:10,0,96	0/0:20,0:16:20.90:0,21,165	0/0:19,0:20:31.93:0,32,252	1/1:7,24:31:69.17:736,69,0	1/1:4,12:16:33.08:349,33,0	0/0:31,1:32:42.86:0,43,555	0/0:21,0:23:54.99:0,55,427	0/0:21,0:21:53.90:0,54,439	0/1:8,1:9:14.03:14,0,105	0/0:21,1:22:27.92:0,28,432	0/0:18,0:18:47.93:0,48,394	0/0:24,0:25:58.94:0,59,474	0/0:24,0:24:50.92:0,51,419	0/0:21,0:21:44.94:0,45,369	0/0:31,0:31:83.87:0,84,686	0/0:40,0:40:95.61:0,96,783	0/0:24,0:23:50.51:0,51,415	0/0:26,0:25:59.85:0,60,487	0/0:24,0:24:46.89:0,47,375	0/0:19,0:20:49.96:0,50,397	0/0:7,0:7:17.95:0,18,142	0/0:26,0:26:71.90:0,72,591	0/0:13,0:13:29.94:0,30,244	0/0:21,0:23:46.01:0,46,357	0/0:13,0:13:29.96:0,30,246	0/0:6,0:6:11.97:0,12,98
chr10	13980157	.	A	AAAAAAAAAAAG	10704.72	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=0.683;DP=439;FS=5.351;HRun=0;HaplotypeScore=119.4107;InbreedingCoeff=0.7416;MQ=60.57;MQ0=12;MQRankSum=-6.524;QD=30.41;ReadPosRankSum=-0.658;VQSLOD=3.5207;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:18:29.67:0,30,673	1/1:3,6:9:3.01:156,3,0	0/0:16,0:7:20.35:0,20,200	0/0:15,0:12:1.96:0,2,151	1/1:9,8:17:19.13:511,19,0	1/1:7,9:21:12.04:455,12,0	1/1:4,1:14:7.27:302,7,0	1/1:17,0:34:53.76:1220,54,0	1/1:7,0:7:12.04:549,12,0	1/1:12,0:12:11.98:526,12,0	1/1:12,0:12:33.09:1084,33,0	0/0:10,0:10:16.57:0,17,239	1/1:7,1:21:15.52:536,16,0	1/1:9,7:14:9.46:437,9,0	1/1:6,4:13:9.50:470,10,0	1/1:11,0:17:4.22:24,4,0	1/1:9,4:15:9.02:383,9,0	1/1:12,11:24:12.04:578,12,0	1/1:6,0:14:27.05:962,27,0	1/1:6,7:17:15.01:648,15,0	1/1:8,0:7:9.02:205,9,0	0/0:9,0:9:11.90:0,12,272	1/1:7,0:7:3.01:155,3,0	1/1:4,4:11:11.25:476,11,0	0/0:18,0:17:33.11:0,33,978	1/1:7,7:15:22.32:564,22,0	1/1:8,0:16:10.23:163,10,0	1/1:15,1:18:6.02:300,6,0
chr10	13980168	.	G	GAAAAAAAAAAG	13031.58	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=0.849;DP=434;FS=6.184;HRun=0;HaplotypeScore=132.4757;InbreedingCoeff=0.8544;MQ=61.70;MQ0=4;MQRankSum=-7.102;QD=37.13;ReadPosRankSum=-1.617;VQSLOD=3.3756;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:29.69:0,30,673	1/1:11,0:11:6:196,6,0	0/0:15,0:7:20.35:0,20,200	0/0:14,0:12:1.96:0,2,151	1/1:19,0:17:23.88:634,24,0	1/1:22,0:21:21.06:939,21,0	1/1:12,0:12:15.05:525,15,0	1/1:38,0:38:66.17:997,66,0	1/1:5,0:5:15.05:277,15,0	1/1:11,0:11:14.97:372,15,0	1/1:16,0:16:31.83:337,32,0	0/0:10,0:10:16.57:0,17,239	1/1:21,0:21:23.07:677,23,0	1/1:13,0:12:12.47:555,12,0	1/1:13,0:13:15.50:687,15,0	1/1:14,0:14:13.25:498,13,0	1/1:20,0:18:17.99:781,18,0	1/1:26,0:24:18.06:766,18,0	1/1:17,0:17:36.01:886,36,0	1/1:20,0:20:23.98:894,24,0	1/1:5,0:5:12.03:225,12,0	0/0:9,0:9:13.68:0,14,275	1/1:2,5:8:3:155,3,0	1/1:10,0:8:12.04:566,12,0	0/0:15,0:15:33.11:0,33,978	1/1:17,0:17:33.06:739,33,0	1/1:17,0:17:19.24:580,19,0	1/1:16,0:16:18.01:744,18,0
chr10	13980301	.	CTT	C	7705.51	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=4.778;DP=393;FS=0.551;HRun=11;HaplotypeScore=67.1297;InbreedingCoeff=0.9204;MQ=67.56;MQ0=3;MQRankSum=-2.122;QD=24.54;ReadPosRankSum=2.413;VQSLOD=4.7406;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:78.19:0,78,1129	1/1:1,6:7:18.04:192,18,0	0/0:10,0:6:6.01:0,6,69	0/0:14,0:9:18.29:0,18,206	1/1:1,14:15:42.10:447,42,0	1/1:0,0:24:49.40:215,49,0	1/1:1,0:9:21.95:96,22,0	1/1:7,32:38:99:1043,99,0	1/1:0,8:8:21.05:223,21,0	1/1:1,12:13:30.07:319,30,0	1/1:1,14:15:36.08:383,36,0	0/0:7,0:7:21.07:0,21,322	1/1:0,10:10:30.08:319,30,0	1/1:3,9:12:21.03:223,21,0	1/1:2,10:12:30.07:318,30,0	1/1:1,14:15:33.07:351,33,0	1/1:2,24:25:66.15:702,66,0	1/1:3,19:22:51.11:542,51,0	1/1:4,18:21:54.08:575,54,0	1/1:0,16:16:42.05:433,42,0	1/1:0,5:5:12.03:128,12,0	0/0:2,0:2:6.02:0,6,92	1/1:2,6:8:18.04:192,18,0	1/1:0,2:2:6.02:64,6,0	0/0:12,0:13:29.55:0,30,393	1/1:1,14:15:39.06:398,39,0	1/1:0,10:10:24.06:255,24,0	1/1:0,9:9:27.07:287,27,0
chr10	13980622	.	T	TC	1951.69	PASS	AB=1.000;AC=37;AF=0.712;AN=52;BaseQRankSum=8.892;DP=247;FS=3.103;HRun=0;HaplotypeScore=95.3971;InbreedingCoeff=0.3782;MQ=62.96;MQ0=31;MQRankSum=-6.955;QD=15.87;ReadPosRankSum=-0.093;VQSLOD=5.6643;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:66.16:0,66,853	1/1:3,0:2:6.01:59,6,0	0/0:43,0:7:0.57:0,1,79	0/0:26,0:6:8.04:0,8,41	1/1:6,1:7:11.94:111,12,0	1/1:11,0:11:30.01:285,30,0	1/1:7,0:6:15.03:158,15,0	1/1:6,0:1:2.80:13,3,0	1/1:6,0:5:15.02:147,15,0	0/1:5,0:4:29.04:84,0,29	1/1:3,0:2:5.91:39,6,0	0/0:12,0:12:29.85:0,30,319	1/1:3,0:3:8.80:69,9,0	0/1:2,0:2:23.21:23,0,36	1/1:6,1:7:17.88:172,18,0	1/1:3,0:3:9.01:88,9,0	0/1:7,0:6:0.94:104,0,1	1/1:10,0:9:1.74:137,2,0	1/1:7,0:4:12.03:127,12,0	1/1:4,1:5:15.03:151,15,0	./.	./.	1/1:3,0:2:6:54,6,0	0/1:2,0:2:7.67:11,0,8	0/0:13,0:13:39.06:0,39,464	1/1:3,1:4:11.82:114,12,0	1/1:7,0:7:11.97:111,12,0	0/1:15,0:11:16.71:60,0,17
chr10	13981294	.	T	TTTA	21902.28	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-10.250;DP=564;FS=7.270;HRun=0;HaplotypeScore=71.2647;InbreedingCoeff=0.9901;MQ=69.19;MQ0=0;MQRankSum=-5.362;QD=49.33;ReadPosRankSum=1.571;VQSLOD=6.8864;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:81.26:0,81,1343	1/1:1,13:15:24.07:508,24,0	0/0:15,0:14:32.31:0,32,540	0/0:9,0:8:13.94:0,14,169	1/1:0,23:23:63.06:1202,63,0	1/1:0,24:25:60.21:1288,60,0	1/1:0,7:7:15.05:335,15,0	1/1:2,27:31:84.26:1712,84,0	1/1:1,14:16:30.10:610,30,0	1/1:3,31:34:93.10:1960,93,0	1/1:1,21:22:51.17:1064,51,0	0/0:25,0:25:72.22:0,72,1165	1/1:0,12:13:24.08:536,24,0	1/1:0,14:15:36.12:774,36,0	1/1:2,20:22:57.19:1245,57,0	1/1:3,20:24:42.14:911,42,0	1/1:3,29:35:75.17:1603,75,0	1/1:1,16:17:42.14:867,42,0	1/1:1,14:15:42.14:912,42,0	1/1:3,24:27:66.22:1416,66,0	1/1:0,14:15:24.08:507,24,0	0/0:13,0:13:36.12:0,36,598	1/1:1,11:12:27.08:574,27,0	1/1:1,11:12:21.07:439,21,0	0/0:29,0:29:87.29:0,87,1449	1/1:3,22:25:66.22:1359,66,0	1/1:2,17:19:36.12:805,36,0	1/1:1,18:19:57.20:1274,57,0
chr10	13981628	.	CGAAAA	C	10025.81	PASS	AB=0.586;AC=42;AF=0.750;AN=56;BaseQRankSum=9.134;DP=458;FS=1.631;HRun=0;HaplotypeScore=140.7990;InbreedingCoeff=0.7704;MQ=64.21;MQ0=10;MQRankSum=-7.678;QD=29.40;ReadPosRankSum=6.131;VQSLOD=4.4952;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:4.04:0,4,697	1/1:0,4:5:14.98:255,15,0	0/0:31,0:15:19.46:0,19,216	0/0:26,0:15:10.48:0,10,140	1/1:0,11:21:38.38:376,38,0	1/1:0,2:19:40.91:503,41,0	1/1:0,2:18:49.17:517,49,0	1/1:0,10:22:58.80:675,59,0	1/1:0,5:7:11.93:183,12,0	1/1:0,11:20:53.41:733,53,0	1/1:0,8:11:26.79:373,27,0	0/0:15,0:15:41.73:0,42,802	1/1:0,10:13:32.94:553,33,0	1/1:0,12:14:29.87:503,30,0	1/1:0,18:21:41.70:694,42,0	1/1:1,18:23:35.96:792,36,0	1/1:0,13:14:20.99:377,21,0	0/1:0,10:14:5.41:337,0,5	0/1:2,10:17:84.65:555,0,85	1/1:0,11:22:55.87:573,56,0	1/1:3,3:11:20.19:199,20,0	0/0:10,0:10:27.91:0,28,383	1/1:0,8:11:14.40:220,14,0	1/1:0,9:11:14.83:239,15,0	0/0:16,0:16:42.04:0,42,723	1/1:0,12:15:44.71:623,45,0	1/1:1,12:18:32.17:461,32,0	1/1:1,8:9:15.05:284,15,0
chr10	13983125	.	AAAACAAAC	A	11180.64	PASS	AB=1.000;AC=39;AF=0.696;AN=56;BaseQRankSum=12.180;DP=576;FS=1.556;HRun=0;HaplotypeScore=164.9493;InbreedingCoeff=0.8437;MQ=53.25;MQ0=7;MQRankSum=-8.872;QD=28.74;ReadPosRankSum=1.873;VQSLOD=4.7855;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:45.63:0,46,1444	1/1:3,2:5:6.02:152,6,0	0/0:26,0:22:17.95:0,18,428	0/0:26,0:15:10.59:0,11,206	1/1:5,13:18:33.11:790,33,0	0/0:24,0:24:54.19:0,54,1909	0/0:20,0:21:45.15:0,45,1451	0/1:23,0:21:67.82:72,0,68	1/1:3,6:9:15.05:379,15,0	1/1:9,10:17:27.09:682,27,0	1/1:9,13:22:27.01:560,27,0	0/0:20,0:20:36.12:0,36,1350	1/1:7,9:16:17.81:455,18,0	1/1:5,8:14:18.06:435,18,0	1/1:9,21:30:42.14:1061,42,0	1/1:15,16:32:33.11:814,33,0	1/1:21,9:30:30.07:659,30,0	1/1:9,5:14:9.03:227,9,0	1/1:13,7:21:24.07:501,24,0	1/1:9,9:18:21.03:475,21,0	1/1:7,7:15:11.54:237,12,0	0/0:25,0:26:36.11:0,36,1284	1/1:8,14:22:28.30:630,28,0	1/1:8,3:11:3.01:76,3,0	0/0:18,0:18:45.15:0,45,1713	1/1:13,20:34:63.22:1460,63,0	1/1:14,14:28:36.12:910,36,0	1/1:0,8:8:24.08:607,24,0
chr10	13983130	.	AAAC	A	1569.02	PASS	AB=0.990;AC=20;AF=0.357;AN=56;BaseQRankSum=16.755;DP=559;FS=11.226;HRun=0;HaplotypeScore=141.3348;InbreedingCoeff=-0.4053;MQ=52.39;MQ0=7;MQRankSum=-10.540;QD=4.26;ReadPosRankSum=4.370;VQSLOD=1.9527;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:73.12:0,73,1195	0/1:3,0:3:22.98:23,0,27	0/0:22,0:18:45.57:0,46,646	0/0:24,0:13:33.99:0,34,420	0/1:18,0:18:96.91:97,0,110	0/0:24,0:24:72.23:0,72,1423	0/0:20,0:20:59.93:0,60,1115	0/1:23,6:27:99:154,0,609	0/1:9,0:9:55.99:56,0,84	0/1:19,0:17:95.64:96,0,205	0/1:21,0:21:94.06:94,0,205	0/0:21,0:21:63.21:0,63,1169	0/1:15,0:15:59.90:60,0,181	0/1:14,0:14:62.70:63,0,147	0/1:29,0:29:99:158,0,223	0/1:32,0:32:99:100,0,418	0/1:28,0:28:28.01:28,0,412	0/1:12,0:12:17.84:18,0,219	0/1:19,0:19:66.25:66,0,324	0/1:17,0:17:76.80:77,0,177	0/1:15,0:15:22.30:22,0,151	0/0:24,0:24:57.54:0,58,1124	0/1:22,0:22:99:103,0,196	0/0:11,0:11:8.06:0,8,232	0/0:20,0:20:57.19:0,57,1149	0/1:32,0:32:99:274,0,232	0/1:26,0:26:99:120,0,359	1/1:8,0:8:23.22:127,23,0
chr10	13984135	.	C	CTGTGAATTTTT	12404.63	PASS	AB=1.000;AC=39;AF=0.750;AN=52;BaseQRankSum=1.428;DP=249;FS=54.731;HRun=0;HaplotypeScore=61.5978;InbreedingCoeff=0.7454;MQ=57.95;MQ0=24;MQRankSum=-9.182;QD=82.70;ReadPosRankSum=-5.091;VQSLOD=2.0970;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:27:81.28:0,81,3005	0/1:4,0:3:98.70:99,0,103	0/0:11,0:6:18.06:0,18,509	0/0:8,0:4:12.04:0,12,342	1/1:5,0:5:6:76,6,0	1/1:8,5:13:33.11:1790,33,0	1/1:5,2:7:15.05:885,15,0	1/1:8,3:11:33.10:1489,33,0	1/1:4,3:6:15.05:671,15,0	1/1:3,0:3:9.03:297,9,0	1/1:1,1:3:9.03:255,9,0	0/0:16,0:16:45.15:0,45,1584	1/1:5,1:8:15.05:636,15,0	1/1:2,2:4:9.03:396,9,0	1/1:6,3:10:21.07:1156,21,0	1/1:3,0:2:6.02:126,6,0	1/1:9,6:12:21.07:1004,21,0	1/1:7,1:7:15.05:764,15,0	1/1:7,1:6:9.03:437,9,0	1/1:9,0:8:21.05:545,21,0	./.	0/0:10,0:10:24.08:0,24,812	1/1:2,0:2:6.02:176,6,0	1/1:5,4:5:3.01:177,3,0	0/0:16,0:16:45.15:0,45,1652	1/1:7,0:6:15.05:612,15,0	1/1:2,4:5:15.05:812,15,0	./.
chr10	13984367	.	TC	T	5162.93	PASS	AB=0.753;AC=22;AF=0.393;AN=56;BaseQRankSum=16.801;DP=884;FS=21.177;HRun=2;HaplotypeScore=146.8067;InbreedingCoeff=-0.6300;MQ=77.38;MQ0=2;MQRankSum=-15.351;QD=7.01;ReadPosRankSum=-5.557;VQSLOD=-0.4622;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,120,1672	0/1:13,1:14:2.75:3,0,457	0/0:33,0:33:96.32:0,96,1393	0/0:24,0:24:69.23:0,69,1011	0/1:18,12:30:99:145,0,421	0/1:12,14:26:99:261,0,447	0/1:30,14:43:99:304,0,922	0/1:35,12:47:99:283,0,1273	0/1:33,15:48:99:332,0,1118	0/1:24,7:31:99:146,0,862	0/1:5,4:9:82.50:83,0,95	0/0:19,0:19:57.19:0,57,849	0/1:15,18:33:99:358,0,455	0/1:30,16:46:99:296,0,979	0/1:42,24:65:99:480,0,1406	0/1:32,22:54:99:545,0,1140	0/1:31,10:41:99:143,0,1040	0/1:17,6:23:99:109,0,614	0/1:17,9:26:99:259,0,625	0/1:10,5:14:99:115,0,336	0/1:28,11:39:86.10:86,0,752	0/0:9,0:9:24.08:0,24,358	0/1:20,10:30:99:194,0,531	0/1:18,12:30:18.62:19,0,541	0/0:18,0:18:54.16:0,54,770	0/1:26,11:37:99:383,0,846	0/1:20,18:38:99:582,0,505	0/1:7,2:9:37.35:37,0,114
chr10	13985014	.	CT	C	2461.61	PASS	AB=0.806;AC=39;AF=0.696;AN=56;BaseQRankSum=2.098;DP=361;FS=24.696;HRun=14;HaplotypeScore=62.8332;InbreedingCoeff=0.6490;MQ=71.67;MQ0=10;MQRankSum=-5.877;QD=10.56;ReadPosRankSum=0.328;VQSLOD=1.0464;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,1:28:7.99:0,8,320	1/1:2,0:2:2.97:20,3,0	0/0:27,0:14:14.86:0,15,114	0/0:16,0:11:8.04:0,8,46	0/1:8,3:12:32.49:68,0,32	0/0:18,3:21:3.41:0,3,322	0/0:10,0:10:12.01:0,12,111	1/1:7,12:16:38.01:252,38,0	1/1:0,5:6:14.28:90,14,0	1/1:5,11:17:29.63:192,30,0	1/1:2,7:9:23.76:162,24,0	0/0:7,1:7:11.78:0,12,84	1/1:4,7:12:23.73:163,24,0	1/1:4,6:10:17.79:123,18,0	1/1:3,6:9:14.88:103,15,0	1/1:3,7:10:14.86:103,15,0	1/1:7,14:19:34.38:218,34,0	1/1:2,6:10:19.65:120,20,0	1/1:9,11:19:26.69:185,27,0	0/1:4,4:7:2.43:100,0,2	1/1:1,4:4:5.89:41,6,0	0/1:5,0:5:13.36:13,0,19	1/1:2,3:5:11.87:81,12,0	1/1:2,5:8:14.87:103,15,0	0/0:16,0:16:38.97:0,39,349	1/1:7,9:15:28.76:191,29,0	1/1:5,11:16:34.20:220,34,0	1/1:2,7:9:14.87:103,15,0
chr10	13985031	.	GATTT	G	5090.87	PASS	AC=40;AF=0.800;AN=50;BaseQRankSum=3.434;DP=317;FS=16.326;HRun=0;HaplotypeScore=65.5168;InbreedingCoeff=0.6855;MQ=47.53;MQ0=17;MQRankSum=-6.086;QD=20.95;ReadPosRankSum=1.454;VQSLOD=3.1284;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:39.13:0,39,933	./.	0/0:12,0:3:2.97:0,3,20	0/0:6,0:4:3:0,3,25	1/1:6,6:11:1.45:48,1,0	1/1:7,14:19:30.10:509,30,0	1/1:3,5:8:15.05:254,15,0	1/1:10,11:18:30.10:509,30,0	1/1:3,6:8:12.04:189,12,0	1/1:11,7:17:18.06:305,18,0	1/1:5,7:12:12.04:203,12,0	0/0:6,0:4:5.99:0,6,96	1/1:6,4:9:12.04:203,12,0	1/1:0,6:6:18.06:305,18,0	1/1:2,7:9:11.81:203,12,0	1/1:6,3:9:9.03:153,9,0	1/1:14,5:16:12.04:203,12,0	1/1:7,3:10:9.03:153,9,0	1/1:9,11:19:30.10:509,30,0	1/1:7,5:10:8.98:153,9,0	1/1:3,2:4:3.01:51,3,0	./.	1/1:1,6:7:15.05:254,15,0	./.	0/0:15,0:14:27.05:0,27,614	1/1:6,9:12:24.08:392,24,0	1/1:2,11:12:27.09:458,27,0	1/1:7,0:6:3.01:36,3,0
chr10	13985507	.	A	AACAC	243.85	PASS	AB=0.942;AC=18;AF=0.409;AN=44;BaseQRankSum=-0.326;DP=540;FS=12.428;HRun=0;HaplotypeScore=109.2337;InbreedingCoeff=0.2049;MQ=66.74;MQ0=16;MQRankSum=-0.370;QD=0.99;ReadPosRankSum=2.032;VQSLOD=1.2212;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:31:0.25:1,0,0	1/1:4,1:5:6.02:100,6,0	./.	./.	0/0:12,0:11:4.78:0,5,48	0/0:23,0:24:2.43:0,2,11	0/1:27,0:29:19.82:20,0,91	./.	0/0:28,0:28:5.49:0,5,67	./.	1/1:14,0:13:5.92:41,6,0	0/0:22,0:22:0.35:0,0,0	0/0:18,0:18:3.85:0,4,22	0/0:25,0:24:5.76:0,6,64	0/0:24,0:23:9:0,9,85	0/1:24,0:24:7.40:7,0,119	0/1:15,0:15:6.83:7,0,19	1/1:16,0:15:6.30:38,6,0	./.	0/0:18,0:16:5.57:0,6,50	0/1:20,0:22:5.54:6,0,45	./.	1/1:11,0:11:2.99:24,3,0	0/1:27,8:39:6.03:64,0,6	0/0:13,0:13:3.40:0,3,29	1/1:25,0:22:7.20:55,7,0	0/0:12,0:12:2.70:0,3,14	1/1:5,0:7:2.74:12,3,0
chr10	13986036	.	T	TGG	18080.40	PASS	AB=0.564;AC=41;AF=0.732;AN=56;BaseQRankSum=-12.937;DP=627;FS=5.101;HRun=6;HaplotypeScore=68.8385;InbreedingCoeff=0.7501;MQ=62.90;MQ0=4;MQRankSum=0.235;QD=38.14;ReadPosRankSum=1.255;VQSLOD=4.4770;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:78.23:0,78,951	1/1:2,12:14:27.09:456,27,0	0/0:28,0:21:5.78:0,6,556	0/0:16,0:14:29.78:0,30,341	1/1:4,20:24:60.16:982,60,0	1/1:2,26:28:69.24:1167,69,0	1/1:3,10:13:27.09:436,27,0	1/1:2,19:21:42.09:656,42,0	1/1:2,17:18:42.14:710,42,0	1/1:3,22:25:66.23:1101,66,0	1/1:4,21:25:48.16:812,48,0	0/0:30,0:30:84.25:0,84,1013	1/1:4,20:24:56.78:916,57,0	1/1:4,23:25:57.19:955,57,0	1/1:4,23:27:69.24:1167,69,0	1/1:0,32:33:86.78:1429,87,0	0/1:3,15:20:22.15:668,0,22	0/1:2,14:16:0.47:522,0,0	0/1:5,8:13:9.52:355,0,10	1/1:2,20:22:57.01:840,57,0	1/1:1,12:13:30.10:507,30,0	0/0:26,0:26:75.18:0,75,865	1/1:6,7:13:17.88:294,18,0	1/1:1,11:11:30.10:507,30,0	0/0:21,0:21:63.20:0,63,767	1/1:3,23:26:63.22:1063,63,0	1/1:4,34:37:87.30:1471,87,0	1/1:0,21:21:63.22:1065,63,0
chr10	13986337	.	T	TC	20967.32	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-14.363;DP=792;FS=18.406;HRun=4;HaplotypeScore=81.4975;InbreedingCoeff=0.9987;MQ=68.68;MQ0=1;MQRankSum=-3.308;QD=34.37;ReadPosRankSum=1.839;VQSLOD=3.1553;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:46:99:0,132,1496	1/1:2,11:13:27.09:369,27,0	0/0:27,0:26:34.44:0,34,548	0/0:30,0:29:72.16:0,72,788	1/1:0,22:22:63.21:857,63,0	1/1:2,20:22:60.20:820,60,0	1/1:2,26:28:66.22:903,66,0	1/1:2,22:24:63.19:830,63,0	1/1:1,31:32:84.10:1147,84,0	1/1:2,30:31:87.28:1174,87,0	1/1:2,20:22:57.19:777,57,0	0/0:33,0:33:93.26:0,93,1050	1/1:2,29:31:81.26:1102,81,0	1/1:1,23:24:63.21:862,63,0	1/1:2,34:36:90.30:1231,90,0	1/1:0,40:40:99:1559,114,0	1/1:2,40:42:99:1493,111,0	1/1:2,21:23:51.17:697,51,0	1/1:3,29:32:87.26:1155,87,0	1/1:1,23:24:69.07:874,69,0	1/1:3,28:32:67.11:940,67,0	0/0:19,0:19:43.83:0,44,569	1/1:6,16:22:39.64:553,40,0	1/1:2,36:37:96.16:1312,96,0	0/0:23,0:23:66.19:0,66,748	1/1:3,18:21:20.17:663,20,0	1/1:1,36:37:90.30:1230,90,0	1/1:2,11:13:32.78:421,33,0
chr10	13988055	.	A	AGGGATC	31280.25	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-9.150;DP=631;FS=8.092;HRun=0;HaplotypeScore=135.1732;InbreedingCoeff=0.9703;MQ=69.50;MQ0=2;MQRankSum=-15.154;QD=68.00;ReadPosRankSum=0.454;VQSLOD=5.4831;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:90.08:0,90,2065	1/1:1,4:5:9.03:310,9,0	0/0:30,0:22:16.84:0,17,992	0/0:38,0:34:77.94:0,78,1756	1/1:5,14:20:17.89:621,18,0	1/1:4,11:18:36.12:1154,36,0	1/1:10,14:26:42.14:1440,42,0	1/1:9,9:22:57.18:1655,57,0	1/1:4,15:20:48.16:1673,48,0	1/1:8,16:26:69.23:2128,69,0	1/1:3,8:12:11.96:422,12,0	0/0:31,0:31:84.28:0,84,1925	1/1:6,18:27:51.17:1686,51,0	1/1:2,19:24:63.22:2175,63,0	1/1:5,32:40:93.32:3240,93,0	1/1:4,17:28:54.06:1851,54,0	1/1:8,12:22:27.09:952,27,0	1/1:5,14:20:45.15:1580,45,0	1/1:6,13:20:54.18:1675,54,0	1/1:4,11:16:36.12:1213,36,0	1/1:8,18:27:47.90:1460,48,0	0/0:19,0:19:51.18:0,51,1201	1/1:3,8:13:18.06:558,18,0	1/1:11,13:26:42.14:1220,42,0	0/0:19,0:19:51.15:0,51,1158	1/1:4,18:26:75.24:2368,75,0	1/1:2,12:15:42.14:1476,42,0	1/1:0,5:7:12.04:423,12,0
chr10	13988690	.	CA	C	20275.03	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=15.222;DP=737;FS=0.320;HRun=2;HaplotypeScore=118.6404;InbreedingCoeff=0.9995;MQ=87.53;MQ0=0;MQRankSum=-5.051;QD=36.27;ReadPosRankSum=3.355;VQSLOD=4.4661;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,147,2173	1/1:2,8:10:24.08:312,24,0	0/0:28,0:28:81.27:0,81,1161	0/0:25,0:24:69.20:0,69,986	1/1:0,18:18:54.18:701,54,0	1/1:0,19:19:54.18:701,54,0	1/1:0,27:27:66.21:857,66,0	1/1:2,29:31:87.28:1127,87,0	1/1:1,22:23:63.20:818,63,0	1/1:1,28:29:84.27:1091,84,0	1/1:0,18:18:54.18:701,54,0	0/0:32,0:32:96.32:0,96,1409	1/1:0,25:25:69.22:896,69,0	1/1:1,22:23:60.19:779,60,0	1/1:1,40:41:99:1441,111,0	1/1:2,36:38:99:1363,105,0	1/1:0,35:35:99:1324,102,0	1/1:0,31:31:87.28:1128,87,0	1/1:1,17:18:51.17:662,51,0	1/1:1,19:20:57.19:739,57,0	1/1:0,38:38:99:1286,99,0	0/0:23,0:23:69.21:0,69,997	1/1:1,18:19:51.16:651,51,0	1/1:0,26:26:75.24:974,75,0	0/0:20,0:20:60.20:0,60,899	1/1:0,30:30:90.29:1168,90,0	1/1:0,30:30:90.29:1168,90,0	1/1:0,10:10:30.10:389,30,0
chr10	13989423	.	A	AAG	5018.44	PASS	AB=0.559;AC=27;AF=0.482;AN=56;BaseQRankSum=6.555;DP=697;FS=17.289;HRun=0;HaplotypeScore=128.2750;InbreedingCoeff=0.0355;MQ=86.37;MQ0=0;MQRankSum=-2.022;QD=10.77;ReadPosRankSum=5.349;VQSLOD=3.4864;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,138,2184	1/1:2,0:5:9.30:80,9,0	0/0:26,0:26:72.13:0,72,1037	0/0:20,0:20:23.03:0,23,544	0/1:3,0:16:29.30:106,0,29	0/0:2,0:35:54.46:0,54,182	0/0:4,0:23:16.26:0,16,172	1/1:4,1:22:9.53:271,10,0	0/1:5,0:26:26.82:248,0,27	0/1:3,1:17:12.49:215,0,12	0/1:5,0:17:56.07:87,0,56	0/0:35,0:35:99:0,102,1467	1/1:4,0:19:2.21:195,2,0	1/1:1,0:20:15.52:281,16,0	0/1:5,0:31:45.42:308,0,45	1/1:3,0:33:37.03:468,37,0	1/1:2,0:38:45.64:643,46,0	0/1:4,0:23:5.50:238,0,5	0/1:1,0:7:39.05:44,0,39	0/1:5,0:21:32.92:197,0,33	0/1:9,0:41:68.75:349,0,69	0/0:16,0:16:48.06:0,48,701	0/1:4,0:20:51.64:89,0,52	0/1:5,0:48:36.02:565,0,36	0/0:25,0:25:60.13:0,60,857	0/1:10,0:25:99:226,0,172	1/1:6,0:32:8.34:372,8,0	0/1:1,0:5:17.48:37,0,17
chr10	13990834	.	T	TC	5912.06	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=7.957;DP=237;FS=6.315;HRun=1;HaplotypeScore=77.0504;InbreedingCoeff=0.9023;MQ=55.35;MQ0=1;MQRankSum=-9.224;QD=35.19;ReadPosRankSum=0.767;VQSLOD=4.6666;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:51.14:0,51,635	1/1:0,7:7:18.53:240,19,0	0/0:10,0:3:9.03:0,9,113	0/0:9,0:6:10.28:0,10,123	1/1:1,14:15:19.94:375,20,0	1/1:0,5:5:12.04:162,12,0	1/1:0,8:8:18.06:256,18,0	1/1:0,12:11:32.78:424,33,0	1/1:0,5:5:12.04:165,12,0	1/1:0,3:3:9.03:127,9,0	1/1:0,6:6:18.06:228,18,0	0/0:11,0:11:33.11:0,33,428	1/1:0,4:4:12.04:161,12,0	1/1:0,9:9:27.09:354,27,0	1/1:0,9:9:24.08:316,24,0	1/1:0,8:8:24.08:319,24,0	1/1:0,11:11:20.81:277,21,0	1/1:3,7:10:27.05:343,27,0	1/1:0,5:5:15.05:207,15,0	1/1:0,9:9:27.09:356,27,0	1/1:0,2:2:6.02:78,6,0	0/0:7,0:7:21.06:0,21,261	1/1:0,5:5:15.05:202,15,0	1/1:0,3:3:9.03:120,9,0	0/0:15,0:15:39.12:0,39,494	1/1:1,7:7:21.06:269,21,0	1/1:1,12:13:36.12:491,36,0	1/1:0,11:11:33.11:443,33,0
chr10	13990837	.	T	TAAA	7666.51	PASS	AB=1.000;AC=45;AF=0.804;AN=56;BaseQRankSum=9.445;DP=234;FS=4.257;HRun=3;HaplotypeScore=82.9816;InbreedingCoeff=0.8329;MQ=55.30;MQ0=1;MQRankSum=-9.987;QD=43.81;ReadPosRankSum=0.246;VQSLOD=4.0661;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:45.15:0,45,701	1/1:1,5:7:21.07:385,21,0	0/1:10,0:3:3.74:4,0,60	0/0:9,0:6:9.92:0,10,148	1/1:2,10:14:39.13:648,39,0	1/1:2,1:5:12.03:184,12,0	1/1:5,2:7:18.06:305,18,0	1/1:5,6:13:33.03:506,33,0	1/1:2,1:4:12.04:184,12,0	1/1:1,2:3:9.02:146,9,0	1/1:0,5:6:18.06:327,18,0	0/0:11,0:11:33.11:0,33,526	1/1:1,2:4:12.04:196,12,0	1/1:2,7:9:27.09:466,27,0	1/1:2,5:9:24.08:418,24,0	1/1:2,6:8:24.08:425,24,0	1/1:4,6:10:24.08:408,24,0	1/1:2,6:9:21.07:376,21,0	1/1:2,1:5:12.04:197,12,0	1/1:1,7:9:24.08:451,24,0	1/1:0,1:2:6.02:105,6,0	0/0:7,0:7:21.07:0,21,336	1/1:1,4:5:15.05:270,15,0	1/1:1,2:3:9.03:153,9,0	0/0:16,0:16:48.16:0,48,763	1/1:1,4:7:18.06:314,18,0	1/1:5,7:13:34:612,34,0	1/1:2,7:11:33.11:587,33,0
chr10	13991031	.	C	CG	10528.48	PASS	AB=0.782;AC=44;AF=0.815;AN=54;BaseQRankSum=7.173;DP=409;FS=8.777;HRun=0;HaplotypeScore=70.1584;InbreedingCoeff=0.6202;MQ=49.09;MQ0=18;MQRankSum=-1.710;QD=30.52;ReadPosRankSum=0.591;VQSLOD=3.9739;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:87.29:0,87,1216	1/1:0,3:3:9.03:119,9,0	0/0:2,0:1:3.01:0,3,42	0/1:7,0:5:10.19:10,0,55	1/1:0,7:7:14.80:202,15,0	1/1:2,12:14:39.55:489,40,0	1/1:3,27:28:57.19:777,57,0	1/1:3,26:23:50.36:788,50,0	1/1:0,13:13:39.13:513,39,0	1/1:2,14:15:39.03:518,39,0	1/1:0,7:7:9.03:115,9,0	0/0:21,0:21:54.16:0,54,737	1/1:1,22:22:63.20:830,63,0	1/1:0,12:12:36.12:488,36,0	1/1:3,19:20:51.15:695,51,0	1/1:1,26:27:49.40:881,49,0	1/1:0,23:23:66.17:867,66,0	1/1:2,8:9:18.06:253,18,0	1/1:2,8:7:15.05:191,15,0	1/1:1,1:2:3.01:43,3,0	1/1:0,28:28:69.22:910,69,0	./.	1/1:0,1:1:3.01:38,3,0	0/1:5,17:19:27.11:536,0,27	0/0:5,0:5:15.05:0,15,210	1/1:3,5:7:18.02:213,18,0	1/1:0,20:20:54.13:725,54,0	1/1:2,9:9:24.55:328,25,0
chr10	13991263	.	GT	G	5759.17	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=3.619;DP=465;FS=30.982;HRun=11;HaplotypeScore=72.6492;InbreedingCoeff=0.9592;MQ=63.38;MQ0=5;MQRankSum=-0.284;QD=17.29;ReadPosRankSum=2.261;VQSLOD=3.7976;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,1:25:44.42:0,44,640	1/1:1,5:6:14.98:123,15,0	0/0:12,0:7:13.19:0,13,107	0/0:10,0:6:12.49:0,12,75	1/1:3,23:27:58.95:474,59,0	0/0:7,0:20:31.51:0,32,168	0/0:8,0:24:43.13:0,43,238	1/1:10,33:41:77.83:631,78,0	1/1:3,12:15:32.96:271,33,0	1/1:2,13:15:35.94:293,36,0	1/1:2,11:12:13.11:205,13,0	0/0:11,0:12:29.93:0,30,291	1/1:2,9:11:26.97:222,27,0	1/1:3,8:11:14.97:123,15,0	1/1:1,11:12:29.97:246,30,0	1/1:5,16:21:38.94:320,39,0	1/1:5,24:31:63.99:505,64,0	1/1:2,16:18:38.95:320,39,0	1/1:5,18:22:53.89:437,54,0	1/1:4,18:21:40.04:383,40,0	1/1:2,3:4:8.99:74,9,0	0/0:8,0:8:18.03:0,18,184	1/1:1,7:8:17.98:148,18,0	1/1:1,4:5:8.99:74,9,0	0/0:20,1:21:29.45:0,29,495	1/1:4,13:17:38.93:320,39,0	1/1:6,14:20:41.93:345,42,0	1/1:0,10:10:29.97:246,30,0
chr10	13992776	.	T	TGG	8135.27	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=11.440;DP=483;FS=1.402;HRun=7;HaplotypeScore=102.3930;InbreedingCoeff=0.9876;MQ=80.50;MQ0=0;MQRankSum=-2.979;QD=24.28;ReadPosRankSum=2.975;VQSLOD=3.9244;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:54.13:0,54,617	1/1:7,0:7:12.02:121,12,0	0/0:14,0:13:26.53:0,27,332	0/0:16,0:16:36.02:0,36,376	1/1:12,0:12:35.99:356,36,0	0/0:11,0:11:24.07:0,24,280	0/0:37,0:37:93.25:0,93,1074	1/1:15,1:16:39.03:396,39,0	1/1:12,2:14:36.09:402,36,0	1/1:21,0:21:54.01:497,54,0	1/1:13,0:13:30.06:305,30,0	0/0:20,0:21:38.13:0,38,425	1/1:12,1:13:33.08:381,33,0	1/1:20,0:20:41.31:430,41,0	1/1:20,1:21:33.08:371,33,0	1/1:20,0:20:48.10:489,48,0	1/1:31,0:31:78.18:817,78,0	1/1:27,0:27:56.84:596,57,0	1/1:9,0:9:24.02:229,24,0	1/1:5,2:7:21.06:264,21,0	1/1:35,0:35:81.17:829,81,0	0/0:13,0:13:36.08:0,36,397	1/1:15,1:16:42.10:468,42,0	1/1:16,0:16:35.80:391,36,0	0/0:11,0:10:27.06:0,27,298	1/1:13,0:13:33.05:324,33,0	1/1:16,0:16:33.07:345,33,0	1/1:8,0:8:12.03:126,12,0
chr10	13992778	.	G	GGT	14292.66	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=1.361;DP=483;FS=2.334;HRun=0;HaplotypeScore=78.7368;InbreedingCoeff=0.9557;MQ=82.13;MQ0=0;MQRankSum=-2.807;QD=42.29;ReadPosRankSum=4.428;VQSLOD=6.5757;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:66.17:0,66,925	1/1:0,6:6:12.04:220,12,0	0/0:16,0:15:36.08:0,36,507	0/0:16,0:16:39.10:0,39,549	1/1:0,11:12:36.01:601,36,0	0/0:10,0:10:30.08:0,30,419	0/0:38,0:38:99:0,108,1548	1/1:2,14:16:45.12:732,45,0	1/1:2,11:13:36.12:633,36,0	1/1:0,21:22:63.19:1078,63,0	1/1:2,10:13:30.10:540,30,0	0/0:17,0:17:42.09:0,42,590	1/1:2,10:13:33.11:599,33,0	1/1:2,18:20:44.74:758,45,0	1/1:3,16:20:33.11:584,33,0	1/1:2,17:20:48.16:878,48,0	1/1:2,30:34:78.26:1427,78,0	1/1:2,23:26:57:1042,57,0	1/1:0,11:11:29.46:478,29,0	1/1:2,5:8:24.08:400,24,0	1/1:1,34:35:69.30:1467,69,0	0/0:15,0:15:42.12:0,42,594	1/1:1,15:16:42.14:764,42,0	1/1:2,15:17:35.93:658,36,0	0/0:11,0:10:30.09:0,30,438	1/1:1,12:13:36.08:624,36,0	1/1:0,15:15:33.11:603,33,0	1/1:2,6:8:0.95:207,1,0
chr10	13993148	.	C	CACG	2486.09	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-6.706;DP=625;FS=0.602;HRun=0;HaplotypeScore=87.7079;InbreedingCoeff=0.8499;MQ=71.17;MQ0=0;MQRankSum=-3.673;QD=52.90;ReadPosRankSum=0.202;VQSLOD=5.7948;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,135,2179	0/0:3,0:3:6.02:0,6,98	0/0:13,0:14:20.06:0,20,458	0/0:9,0:8:3.45:0,3,206	0/0:13,0:13:39.12:0,39,609	1/1:2,20:22:57.20:1270,57,0	1/1:4,21:25:60.21:1337,60,0	0/0:23,0:23:57.17:0,57,904	0/0:19,0:19:57.19:0,57,931	0/0:18,0:18:48.15:0,48,759	0/0:7,0:7:9.03:0,9,147	0/0:25,0:25:72.25:0,72,1176	0/0:34,0:34:90.31:0,90,1464	0/0:26,0:26:66.23:0,66,1066	0/0:33,0:33:96.33:0,96,1559	0/0:24,0:24:66.23:0,66,1078	0/0:33,0:33:96.28:0,96,1538	0/0:26,0:26:78.27:0,78,1266	0/0:24,0:24:66.19:0,66,1028	0/0:10,0:10:24.08:0,24,391	0/0:63,0:63:99:0,175,2775	0/0:13,0:13:39.12:0,39,610	0/0:12,0:12:33.11:0,33,533	0/0:27,0:27:78.25:0,78,1248	0/0:9,0:9:27.09:0,27,441	0/0:29,0:29:81.26:0,81,1278	0/0:20,0:20:54.18:0,54,882	0/0:17,0:17:51.17:0,51,833
chr10	13996220	.	GC	G	97.07	PASS	AB=0.778;AC=6;AF=0.167;AN=36;BaseQRankSum=1.687;DP=42;FS=4.218;HRun=1;HaplotypeScore=15.2917;InbreedingCoeff=0.1350;MQ=125.42;MQ0=1;MQRankSum=-1.823;QD=6.93;ReadPosRankSum=1.869;VQSLOD=0.9158;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:2,0:2:5.98:0,6,60	./.	0/0:7,0:4:5.93:0,6,56	0/1:7,0:7:3.47:3,0,5	0/0:3,0:3:9.02:0,9,113	1/1:1,0:1:3:25,3,0	0/1:1,4:5:7.95:151,0,8	0/0:4,0:4:11.93:0,12,92	./.	0/0:1,0:1:3.01:0,3,47	0/0:1,0:1:3:0,3,25	./.	0/0:1,0:1:2.96:0,3,19	0/0:1,0:1:3.01:0,3,46	./.	0/0:1,0:1:3:0,3,25	./.	0/0:1,0:1:2.97:0,3,20	0/0:2,0:2:6.02:0,6,81	./.	0/0:1,0:1:3.01:0,3,47	0/0:2,0:2:3:0,3,25	./.	1/1:1,0:1:2.60:10,3,0	./.	0/0:1,0:1:2.99:0,3,24	./.	./.
chr10	13997870	.	C	CTT	2737.03	PASS	AB=0.885;AC=36;AF=0.643;AN=56;BaseQRankSum=0.328;DP=615;FS=0.000;HRun=15;HaplotypeScore=74.3209;InbreedingCoeff=0.5846;MQ=58.27;MQ0=15;MQRankSum=-2.978;QD=6.08;ReadPosRankSum=-3.239;VQSLOD=-0.7481;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:41:51.86:0,52,437	1/1:2,5:6:12.40:114,12,0	1/1:17,0:5:2.04:7,2,0	0/1:15,0:10:3.63:4,0,8	0/1:10,3:23:2.71:192,0,3	0/1:25,0:25:5.65:6,0,22	0/1:22,0:22:2.43:2,0,13	1/1:24,7:33:33.50:315,34,0	1/1:6,0:16:7.41:43,7,0	1/1:13,0:21:23.93:199,24,0	0/1:8,0:12:10.10:69,0,10	0/0:19,0:22:33.79:0,34,250	0/0:13,0:15:23.18:0,23,176	0/0:15,0:15:17.17:0,17,125	1/1:9,2:20:12.91:135,13,0	1/1:15,2:28:15:145,15,0	1/1:13,18:37:50.05:488,50,0	1/1:13,1:24:8.94:96,9,0	1/1:14,1:23:12.96:174,13,0	1/1:7,1:18:18.16:157,18,0	1/1:9,0:10:14.25:110,14,0	0/1:11,0:11:2.08:2,0,121	0/0:15,0:18:7.18:0,7,147	0/0:27,0:29:68.16:0,68,521	0/0:20,0:22:6.46:0,6,156	1/1:18,5:33:45.84:377,46,0	1/1:8,15:25:13.72:131,14,0	1/1:6,3:14:15.03:161,15,0
chr10	13997873	.	T	TC	747.31	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=-4.290;DP=613;FS=14.557;HRun=0;HaplotypeScore=69.5700;InbreedingCoeff=0.7491;MQ=56.26;MQ0=18;MQRankSum=-1.311;QD=12.05;ReadPosRankSum=2.602;VQSLOD=3.0080;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,112,1224	0/0:7,0:6:9.22:0,9,53	0/0:18,0:3:2.63:0,3,38	0/0:17,0:9:18.77:0,19,147	0/0:25,0:24:40.53:0,41,290	1/1:3,25:28:36.01:413,36,0	1/1:3,20:22:39.02:454,39,0	0/0:33,0:31:75.95:0,76,522	0/0:16,0:16:21.52:0,22,161	0/0:22,0:21:37.94:0,38,321	0/0:14,0:13:26.21:0,26,184	0/0:20,0:20:51.07:0,51,582	0/0:15,0:15:42.05:0,42,463	0/0:16,0:15:39.01:0,39,409	0/0:21,0:20:32.72:0,33,249	0/0:27,0:27:43.57:0,44,308	0/0:38,0:37:58.12:0,58,334	0/0:26,0:24:32.66:0,33,243	0/0:20,0:20:51.03:0,51,354	0/0:19,0:18:25.13:0,25,175	0/1:11,0:10:3.43:3,0,82	0/0:12,0:12:28.61:0,29,329	0/0:18,0:18:47.99:0,48,497	0/0:31,0:30:84.20:0,84,1046	0/0:21,0:20:51.07:0,51,499	0/0:33,0:33:82.40:0,82,554	0/0:25,0:25:35.40:0,35,250	0/0:16,0:14:26.70:0,27,191
chr10	14000126	.	C	CA	744.54	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-5.882;DP=549;FS=5.284;HRun=7;HaplotypeScore=53.3876;InbreedingCoeff=0.9574;MQ=56.07;MQ0=13;MQRankSum=0.884;QD=21.27;ReadPosRankSum=1.228;VQSLOD=3.1208;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,108,1034	0/0:9,0:9:27.04:0,27,260	0/0:24,0:6:10.72:0,11,85	0/0:27,0:9:11.84:0,12,113	0/0:19,0:19:42.05:0,42,400	1/1:3,10:13:30.09:362,30,0	1/1:6,16:21:42.13:504,42,0	0/0:29,0:24:63.08:0,63,595	0/0:12,0:12:30.04:0,30,289	0/0:17,0:17:36.04:0,36,347	0/0:13,0:13:30.03:0,30,283	0/0:16,0:16:40.30:0,40,374	0/0:11,0:11:26.78:0,27,260	0/0:15,0:15:30.05:0,30,289	0/0:21,0:21:45.06:0,45,430	0/0:22,0:22:42.02:0,42,391	0/0:25,0:25:66.06:0,66,623	0/0:27,0:27:72.07:0,72,685	0/0:20,0:18:41.99:0,42,386	0/0:20,0:20:51.07:0,51,487	0/0:15,0:15:42.07:0,42,405	0/0:16,0:16:42.02:0,42,396	0/0:22,0:22:38.97:0,39,359	0/0:16,0:16:42.06:0,42,405	0/0:25,0:25:54.07:0,54,516	0/0:18,0:18:42.05:0,42,401	0/0:24,0:24:48.06:0,48,463	0/0:6,0:6:18.03:0,18,173
chr10	14001716	.	C	CA	10300.98	PASS	AC=54;AF=0.964;AN=56;BaseQRankSum=0.922;DP=491;FS=0.000;HRun=1;HaplotypeScore=468.9122;InbreedingCoeff=0.6566;MQ=30.74;MQ0=1;MQRankSum=-1.732;QD=21.15;ReadPosRankSum=0.146;VQSLOD=1.4983;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,22:23:56.60:451,57,0	1/1:2,4:7:20.91:171,21,0	1/1:2,2:2:5.96:43,6,0	0/0:1,3:1:3.01:0,3,33	1/1:2,16:18:35.87:289,36,0	1/1:2,17:19:50.94:433,51,0	1/1:3,21:24:62.81:510,63,0	1/1:5,9:11:21.46:188,21,0	1/1:2,9:11:27.46:234,27,0	1/1:3,22:25:63.51:580,64,0	1/1:0,20:20:53.91:443,54,0	1/1:0,23:23:62.62:523,63,0	1/1:4,24:28:75.84:642,76,0	1/1:3,19:22:54.36:447,54,0	1/1:2,15:17:47.94:402,48,0	1/1:4,22:26:68.93:591,69,0	1/1:1,18:19:47.92:401,48,0	1/1:0,6:6:17.99:155,18,0	1/1:4,9:12:28.75:258,29,0	1/1:4,15:19:47.55:393,48,0	1/1:0,11:11:26.51:187,27,0	1/1:3,13:16:32.90:267,33,0	1/1:2,17:19:44.24:351,44,0	1/1:1,9:10:11.99:102,12,0	1/1:1,22:23:68.59:567,69,0	1/1:1,29:30:89.98:799,90,0	1/1:6,27:30:83.99:740,84,0	1/1:1,5:6:15.47:133,15,0
chr10	14001718	.	G	GA	11728.03	PASS	AB=0.583;AC=53;AF=0.946;AN=56;BaseQRankSum=7.091;DP=510;FS=0.000;HRun=1;HaplotypeScore=501.2907;InbreedingCoeff=0.3020;MQ=30.59;MQ0=1;MQRankSum=0.340;QD=23.18;ReadPosRankSum=6.313;VQSLOD=1.1313;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,22:24:51.37:524,51,0	0/1:2,5:7:4.44:126,0,4	1/1:3,2:2:2.98:21,3,0	0/0:2,2:1:3.01:0,3,42	1/1:6,16:22:38.40:367,38,0	1/1:4,17:21:53.69:541,54,0	1/1:5,21:26:58.21:566,58,0	1/1:3,9:9:2.52:209,3,0	1/1:4,9:13:19.94:285,20,0	1/1:4,22:26:32.29:619,32,0	1/1:1,20:21:56.65:517,57,0	1/1:1,23:24:64.98:608,65,0	1/1:3,24:27:65.89:695,66,0	1/1:2,20:22:42.07:445,42,0	1/1:2,15:17:48.07:474,48,0	1/1:3,22:25:61.05:616,61,0	1/1:1,18:19:50.04:467,50,0	1/1:1,6:7:17.77:161,18,0	1/1:5,9:13:17.74:342,18,0	1/1:5,15:20:40.13:529,40,0	1/1:1,11:12:28.18:227,28,0	1/1:4,13:17:24.04:252,24,0	1/1:3,17:20:35.11:375,35,0	1/1:1,9:10:3.91:102,4,0	1/1:1,22:23:66.08:643,66,0	1/1:4,29:33:81.91:971,82,0	1/1:3,28:29:87.16:889,87,0	1/1:2,5:7:1.81:158,2,0
chr10	14001726	.	T	TG	9248.55	PASS	AC=52;AF=0.963;AN=54;BaseQRankSum=0.388;DP=479;FS=2.976;HRun=0;HaplotypeScore=523.2115;InbreedingCoeff=0.7007;MQ=30.82;MQ0=0;MQRankSum=-0.916;QD=19.47;ReadPosRankSum=1.214;VQSLOD=1.1336;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:19:50.78:410,51,0	1/1:5,1:6:14.99:133,15,0	./.	0/0:3,0:1:3.01:0,3,42	1/1:19,1:20:41.22:281,41,0	1/1:22,0:22:50.65:384,51,0	1/1:21,0:21:50.73:411,51,0	1/1:11,0:8:19.84:179,20,0	1/1:13,0:13:32.77:248,33,0	1/1:23,0:23:62.22:542,62,0	1/1:20,0:20:47.58:363,48,0	1/1:26,0:26:58.18:430,58,0	1/1:24,1:25:70.37:554,70,0	1/1:21,0:21:44.91:369,45,0	1/1:20,0:20:50.74:395,51,0	1/1:26,0:26:68.49:518,68,0	1/1:19,0:19:50.65:407,51,0	1/1:9,0:9:23.75:187,24,0	1/1:11,0:11:27.63:227,28,0	1/1:18,0:18:50.60:380,51,0	1/1:11,0:11:14.93:120,15,0	1/1:16,1:17:29.74:239,30,0	1/1:18,1:19:35.44:288,35,0	1/1:7,0:7:8.97:71,9,0	1/1:25,0:25:71.56:563,72,0	1/1:29,0:29:74.66:673,75,0	1/1:30,0:29:89.40:728,89,0	1/1:6,0:6:17.95:149,18,0
chr10	14001739	.	G	GA	19213.67	PASS	AC=52;AF=0.963;AN=54;BaseQRankSum=1.381;DP=472;FS=0.000;HRun=1;HaplotypeScore=473.7134;InbreedingCoeff=0.6820;MQ=33.03;MQ0=0;MQRankSum=-1.732;QD=40.88;ReadPosRankSum=1.638;VQSLOD=1.6884;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,19:19:45.15:717,45,0	1/1:0,4:4:12.04:191,12,0	./.	0/0:1,0:1:2.97:0,3,20	1/1:1,20:21:39.13:621,39,0	1/1:0,21:21:60.20:956,60,0	1/1:1,16:17:48.16:764,48,0	1/1:0,11:9:27.09:431,27,0	1/1:2,15:17:42.14:668,42,0	1/1:3,21:24:66.22:1049,66,0	1/1:1,21:22:48.16:763,48,0	1/1:1,22:23:63.21:1000,63,0	1/1:0,25:25:75.26:1193,75,0	1/1:2,20:22:57.19:907,57,0	1/1:0,20:20:60.20:954,60,0	1/1:0,24:24:69.24:1100,69,0	1/1:0,17:17:51.17:813,51,0	1/1:1,9:10:27.05:402,27,0	1/1:2,9:10:30.06:451,30,0	1/1:3,18:20:48.16:765,48,0	1/1:0,10:10:12.04:191,12,0	1/1:1,17:18:30.10:477,30,0	1/1:1,16:17:32.99:524,33,0	1/1:1,4:5:9.03:142,9,0	1/1:1,28:29:81.28:1288,81,0	1/1:1,27:28:81.28:1293,81,0	1/1:0,27:26:81.24:1265,81,0	1/1:0,6:6:18.06:287,18,0
chr10	14001748	.	T	TC	14665.14	PASS	AC=52;AF=0.963;AN=54;BaseQRankSum=1.986;DP=452;FS=36.148;HRun=1;HaplotypeScore=486.0352;InbreedingCoeff=0.6237;MQ=31.09;MQ0=0;MQRankSum=0.593;QD=32.52;ReadPosRankSum=6.202;VQSLOD=-0.4327;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,16:18:35.08:500,35,0	1/1:2,4:6:6.05:143,6,0	0/0:1,0:1:3.01:0,3,42	./.	1/1:1,20:21:28.01:414,28,0	1/1:2,19:21:50.95:707,51,0	1/1:2,15:17:39.45:581,39,0	1/1:1,8:9:23.60:277,24,0	1/1:0,16:16:48.15:634,48,0	1/1:3,19:22:48.43:671,48,0	1/1:0,21:21:60.19:783,60,0	1/1:1,21:22:60.11:777,60,0	1/1:2,23:25:64.32:899,64,0	1/1:0,21:21:57.14:722,57,0	1/1:1,16:17:48.15:613,48,0	1/1:2,21:23:54.44:781,54,0	1/1:1,14:15:36.44:540,36,0	1/1:1,7:8:21.07:278,21,0	1/1:1,11:11:24.87:298,25,0	1/1:0,21:20:60.19:795,60,0	1/1:0,8:8:15.01:176,15,0	1/1:1,18:19:42.13:518,42,0	1/1:0,15:15:42:550,42,0	1/1:0,5:5:12.04:157,12,0	1/1:2,24:26:67.33:953,67,0	1/1:4,25:29:51.97:873,52,0	1/1:4,23:26:69.21:879,69,0	1/1:2,4:6:8.81:146,9,0
chr10	14001759	.	G	GA	15758.83	PASS	AB=1.000;AC=53;AF=0.981;AN=54;BaseQRankSum=1.697;DP=465;FS=0.000;HRun=1;HaplotypeScore=460.6334;InbreedingCoeff=0.3121;MQ=35.15;MQ0=0;MQRankSum=-1.723;QD=33.96;ReadPosRankSum=0.831;VQSLOD=1.7181;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,17:17:36.12:493,36,0	1/1:0,4:4:12.04:167,12,0	0/1:2,0:2:4.57:5,0,33	./.	1/1:1,22:23:47.72:583,48,0	1/1:3,18:21:57.11:744,57,0	1/1:3,14:17:48.02:608,48,0	1/1:1,9:10:27.05:353,27,0	1/1:0,21:22:66.22:926,66,0	1/1:2,21:23:63.11:823,63,0	1/1:3,21:24:44.85:590,45,0	1/1:2,22:24:69.16:941,69,0	1/1:4,21:25:66.12:882,66,0	1/1:4,19:23:54.03:757,54,0	1/1:1,17:18:54.11:723,54,0	1/1:1,22:23:66.22:928,66,0	1/1:2,12:14:35.97:437,36,0	1/1:0,7:7:21.07:295,21,0	1/1:4,8:11:32.89:334,33,0	1/1:3,19:21:57.08:747,57,0	1/1:2,7:9:12.04:171,12,0	1/1:1,17:18:42.14:587,42,0	1/1:4,10:14:30.06:397,30,0	1/1:0,5:5:8.99:104,9,0	1/1:5,19:24:63.04:778,63,0	1/1:3,24:27:81.13:1060,81,0	1/1:3,27:29:87.14:1158,87,0	1/1:0,5:5:12.04:168,12,0
chr10	14002163	.	T	TAC	502.28	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=1.350;DP=705;FS=0.975;HRun=0;HaplotypeScore=119.6946;InbreedingCoeff=0.9618;MQ=61.19;MQ0=23;MQRankSum=-1.108;QD=9.30;ReadPosRankSum=0.096;VQSLOD=2.9277;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:96.15:0,96,1328	0/0:8,0:7:15.01:0,15,183	0/0:24,0:16:26.91:0,27,454	0/0:36,0:16:44.98:0,45,597	0/0:22,0:21:42.14:0,42,579	1/1:7,13:19:15.04:230,15,0	1/1:15,19:33:10.95:384,11,0	0/0:27,0:25:57.13:0,57,760	0/0:23,0:22:47.91:0,48,592	0/0:29,0:25:72.15:0,72,980	0/0:24,0:22:45.10:0,45,579	0/0:24,0:24:59.09:0,59,753	0/0:16,0:16:39.13:0,39,547	0/0:29,0:29:75.21:0,75,981	0/0:23,0:22:63.21:0,63,875	0/0:23,0:21:58.66:0,59,787	0/0:40,0:38:84.19:0,84,1082	0/0:29,0:29:53.99:0,54,791	0/0:22,0:21:47.70:0,48,599	0/0:25,0:19:41.94:0,42,522	0/0:38,0:37:87.24:0,87,1134	0/0:17,0:17:42.14:0,42,597	0/0:16,0:16:32.87:0,33,450	0/0:27,0:27:53.94:0,54,749	0/0:14,0:14:33.09:0,33,436	0/0:32,0:30:78.22:0,78,1049	0/0:33,0:29:75.25:0,75,1032	0/0:13,0:12:30.10:0,30,396
chr10	14002167	.	TAC	T	6920.03	PASS	AB=0.734;AC=31;AF=0.554;AN=56;BaseQRankSum=7.238;DP=700;FS=7.375;HRun=0;HaplotypeScore=92.1614;InbreedingCoeff=0.6463;MQ=58.52;MQ0=23;MQRankSum=-1.206;QD=15.41;ReadPosRankSum=4.717;VQSLOD=4.3719;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,2:37:31.18:0,31,890	1/1:3,5:7:12.04:140,12,0	0/0:22,0:13:6.02:0,6,88	0/0:35,0:15:6.02:0,6,87	1/1:6,16:21:15.42:300,15,0	0/0:17,0:16:17.99:0,18,156	0/0:32,0:31:33.63:0,34,300	0/1:18,11:27:12.13:194,0,12	0/1:7,14:21:11.07:324,0,11	1/1:8,20:25:53.99:607,54,0	1/1:7,16:22:39.11:451,39,0	0/0:22,0:22:8.70:0,9,560	0/0:16,0:16:36.07:0,36,496	0/0:28,0:28:60.20:0,60,895	1/1:7,19:25:45.13:525,45,0	1/1:7,16:21:41.98:473,42,0	1/1:8,33:39:56.50:821,56,0	0/1:9,21:30:16.98:473,0,17	1/1:9,12:19:13.34:187,13,0	1/1:5,19:18:36.11:420,36,0	1/1:15,19:34:48.14:560,48,0	0/0:18,0:18:36.10:0,36,531	0/1:16,1:17:2.14:2,0,402	0/0:24,0:24:45.15:0,45,691	0/1:14,4:18:4.88:5,0,377	1/1:13,16:29:32.68:571,33,0	1/1:10,24:31:53.82:587,54,0	1/1:2,12:13:24.54:280,25,0
chr10	14004040	.	GAA	G	500.69	PASS	AB=0.709;AC=4;AF=0.071;AN=56;BaseQRankSum=1.537;DP=508;FS=2.200;HRun=15;HaplotypeScore=78.3748;InbreedingCoeff=0.4787;MQ=79.62;MQ0=1;MQRankSum=-0.750;QD=8.34;ReadPosRankSum=2.639;VQSLOD=1.4169;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:42:99:0,118,1345	0/0:4,0:6:11.52:0,12,116	0/0:32,0:16:35.14:0,35,293	0/0:30,0:23:25.38:0,25,213	0/0:9,0:12:18:0,18,199	0/1:5,11:20:0.52:221,0,1	1/1:9,18:29:38.91:374,39,0	0/0:10,0:12:7.07:0,7,267	0/0:11,1:13:2.60:0,3,245	0/0:14,0:17:20.51:0,21,317	0/0:15,1:19:12.02:0,12,339	0/0:14,1:18:12.16:0,12,376	0/1:9,2:11:19.79:20,0,300	0/0:13,0:15:32.50:0,32,373	0/0:15,0:17:35.71:0,36,435	0/0:13,0:15:29.49:0,29,314	0/0:28,0:32:82.23:0,82,1007	0/0:27,0:33:88.18:0,88,994	0/0:13,1:17:12.13:0,12,387	0/0:17,0:18:34.60:0,35,378	0/0:14,0:16:43.13:0,43,486	0/0:7,0:7:12.04:0,12,162	0/0:7,0:8:17.26:0,17,197	0/0:13,1:18:17.57:0,18,443	0/0:16,0:18:41.66:0,42,460	0/0:11,0:12:21.02:0,21,245	0/0:6,1:11:6.32:0,6,231	0/0:8,0:9:23.54:0,24,261
chr10	14004914	.	A	ATTTG	16014.07	PASS	AB=1.000;AC=33;AF=0.589;AN=56;BaseQRankSum=-15.448;DP=681;FS=0.347;HRun=0;HaplotypeScore=107.0023;InbreedingCoeff=0.8919;MQ=73.16;MQ0=0;MQRankSum=-2.818;QD=38.04;ReadPosRankSum=0.571;VQSLOD=4.7294;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:81.23:0,81,1268	1/1:1,2:3:3.01:74,3,0	0/1:33,0:30:26.73:27,0,398	0/0:24,0:22:15.79:0,16,270	1/1:9,20:29:60.07:1376,60,0	0/0:24,0:24:54.12:0,54,843	0/0:24,0:24:39.07:0,39,543	1/1:11,15:28:48.08:958,48,0	1/1:7,19:27:42.14:1032,42,0	1/1:17,19:38:60.17:1319,60,0	1/1:3,9:12:24.08:549,24,0	0/0:21,0:21:54.16:0,54,843	0/0:19,0:19:48.12:0,48,716	0/0:15,0:15:36.12:0,36,591	1/1:1,21:23:48.16:1170,48,0	1/1:3,21:24:42.14:1033,42,0	1/1:6,20:26:39.13:959,39,0	1/1:10,19:29:52.73:1259,53,0	1/1:8,11:20:36.02:698,36,0	1/1:8,17:27:45.08:1011,45,0	1/1:5,13:20:39.13:960,39,0	0/0:25,0:25:66.17:0,66,980	0/0:19,0:19:42.14:0,42,692	0/0:29,0:29:75.24:0,75,1209	0/0:27,0:27:54.17:0,54,874	1/1:7,24:31:69.21:1526,69,0	1/1:7,29:36:75.26:1844,75,0	1/1:5,8:13:9.03:221,9,0
chr10	14005821	.	T	TCTC	8566.59	PASS	AC=30;AF=0.556;AN=54;BaseQRankSum=-0.753;DP=389;FS=7.532;HRun=0;HaplotypeScore=76.9182;InbreedingCoeff=0.9820;MQ=59.04;MQ0=1;MQRankSum=-6.709;QD=37.74;ReadPosRankSum=0.768;VQSLOD=5.3805;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:60.17:0,60,873	./.	0/0:19,0:15:13.81:0,14,236	0/0:15,0:11:17.56:0,18,246	1/1:3,10:13:33.10:661,33,0	0/0:14,0:14:30.08:0,30,418	0/0:11,0:11:24.06:0,24,328	1/1:39,7:45:86.97:1023,87,0	1/1:1,6:7:21.07:422,21,0	1/1:1,13:14:42.11:748,42,0	1/1:1,4:6:15.05:317,15,0	0/0:11,0:11:30.06:0,30,380	0/0:8,0:8:18.05:0,18,257	0/0:12,0:12:36.10:0,36,509	1/1:3,9:12:21.07:421,21,0	1/1:1,10:11:15.05:291,15,0	1/1:10,3:13:18.95:354,19,0	1/1:13,4:18:32.76:483,33,0	1/1:3,18:20:53.95:767,54,0	1/1:0,8:8:24.08:502,24,0	1/1:3,10:13:12.04:256,12,0	0/0:9,0:9:24.07:0,24,332	0/0:11,0:11:27.07:0,27,367	0/0:14,0:14:30.08:0,30,417	0/0:15,0:15:39.10:0,39,550	1/1:1,13:14:39.12:787,39,0	1/1:10,12:22:57.10:1007,57,0	1/1:1,8:9:27.02:528,27,0
chr10	14005846	.	TG	T	439.29	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=1.718;DP=360;FS=16.617;HRun=1;HaplotypeScore=103.1249;InbreedingCoeff=0.5864;MQ=55.63;MQ0=1;MQRankSum=-3.118;QD=8.29;ReadPosRankSum=-2.063;VQSLOD=-0.5197;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:62.09:0,62,761	0/1:3,0:3:0.70:1,0,26	0/0:19,0:12:31.86:0,32,325	0/0:22,0:12:25.06:0,25,185	0/1:18,0:18:1.89:2,0,193	1/1:0,8:8:24.07:303,24,0	1/1:4,5:9:22.45:250,22,0	0/0:28,0:26:73.16:0,73,524	0/0:11,0:11:9.17:0,9,122	0/0:12,0:12:35.31:0,35,227	0/0:9,0:9:19.07:0,19,145	0/0:6,0:6:18.03:0,18,210	0/0:7,0:7:21.05:0,21,268	0/0:8,0:8:24.05:0,24,288	0/0:10,0:10:21.85:0,22,177	0/0:8,0:8:22.01:0,22,167	0/0:13,0:13:17.65:0,18,153	0/0:11,0:11:24.77:0,25,146	0/0:17,0:15:32.16:0,32,212	0/0:8,0:8:23.55:0,24,151	0/0:9,0:9:14.82:0,15,105	0/0:7,0:7:21.05:0,21,269	0/0:13,0:13:36.10:0,36,470	0/0:13,0:13:39.12:0,39,518	0/0:18,0:18:54.18:0,54,733	0/0:15,0:15:41.12:0,41,260	0/0:21,0:21:58.59:0,59,368	0/1:15,0:15:10.90:11,0,123
chr10	14005847	.	G	GT	4973.82	PASS	AB=0.796;AC=32;AF=0.571;AN=56;BaseQRankSum=6.995;DP=369;FS=6.278;HRun=9;HaplotypeScore=91.9414;InbreedingCoeff=0.8030;MQ=54.97;MQ0=1;MQRankSum=-9.462;QD=20.72;ReadPosRankSum=-2.317;VQSLOD=4.1582;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:44.95:0,45,390	1/1:0,3:3:9.02:99,9,0	0/0:19,0:12:13.72:0,14,156	0/1:20,0:11:16.04:27,0,16	1/1:5,13:18:39.02:400,39,0	0/0:8,0:8:14.23:0,14,39	0/0:9,0:9:12.22:0,12,47	0/1:9,20:27:11.26:551,0,11	1/1:2,10:12:35.56:361,36,0	1/1:3,9:12:27.07:298,27,0	1/1:1,8:9:24.06:262,24,0	0/0:6,0:6:8.98:0,9,78	0/0:7,0:7:18:0,18,156	0/0:7,0:7:17.99:0,18,156	1/1:2,8:10:24.06:263,24,0	1/1:5,3:8:12.03:133,12,0	1/1:6,8:14:8.78:249,9,0	1/1:3,7:10:24.06:261,24,0	1/1:13,6:16:27.54:294,28,0	1/1:5,5:10:24.02:252,24,0	1/1:7,2:9:6.02:66,6,0	0/0:7,0:7:17.99:0,18,156	0/0:14,0:14:32.98:0,33,286	0/0:13,0:13:38.99:0,39,338	0/0:18,0:18:53.99:0,54,469	1/1:5,12:17:39.07:418,39,0	1/1:6,15:21:56.18:600,56,0	1/1:5,12:18:44.84:439,45,0
chr10	14005857	.	GTT	G	286.75	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-0.320;DP=365;FS=14.711;HRun=9;HaplotypeScore=119.9984;InbreedingCoeff=0.8920;MQ=48.96;MQ0=5;MQRankSum=-1.609;QD=19.12;ReadPosRankSum=1.528;VQSLOD=1.0280;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:48.16:0,48,814	0/0:5,0:5:15.03:0,15,194	0/0:16,0:11:15.38:0,15,120	0/0:15,0:7:9.09:0,9,64	0/0:17,0:17:48.68:0,49,622	1/1:3,5:8:20.73:229,21,0	1/1:2,5:7:15.51:174,16,0	0/0:38,0:33:94.77:0,95,1384	0/0:12,0:12:31.01:0,31,499	0/0:14,0:14:36.08:0,36,542	0/0:9,0:9:27.08:0,27,376	0/0:5,0:5:12.04:0,12,206	0/0:6,0:6:18.06:0,18,315	0/0:7,0:7:21.07:0,21,356	0/0:8,0:8:24.06:0,24,335	0/0:7,0:7:21:0,21,294	0/0:11,0:11:24.96:0,25,360	0/0:12,0:12:27.09:0,27,414	0/0:22,0:18:41.95:0,42,573	0/0:11,0:11:30.06:0,30,447	0/0:6,0:6:9.03:0,9,129	0/0:6,0:6:18.05:0,18,287	0/0:12,0:13:32.60:0,33,534	0/0:14,0:14:39.13:0,39,673	0/0:19,0:19:54.18:0,54,915	0/0:16,0:16:42.14:0,42,688	0/0:20,0:21:59.54:0,60,901	0/0:23,0:23:63.21:0,63,944
chr10	14005880	.	GTTT	G	5360.94	PASS	AB=0.660;AC=28;AF=0.500;AN=56;BaseQRankSum=10.392;DP=309;FS=2.420;HRun=10;HaplotypeScore=94.9883;InbreedingCoeff=0.6252;MQ=41.34;MQ0=10;MQRankSum=-9.558;QD=25.77;ReadPosRankSum=-0.329;VQSLOD=3.7164;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:14:39.04:0,39,702	1/1:0,5:5:15.05:204,15,0	0/0:5,0:1:1.25:0,1,3	0/0:9,0:3:3.01:0,3,34	1/1:3,9:12:27.07:360,27,0	0/0:8,0:8:5.94:0,6,41	0/0:4,0:4:2.99:0,3,23	0/1:26,7:27:99:307,0,107	1/1:4,6:10:24.02:297,24,0	0/1:7,8:15:2.96:325,0,3	1/1:3,6:8:18.06:243,18,0	0/0:3,0:3:6.02:0,6,124	0/0:5,0:5:15.04:0,15,265	0/0:5,0:6:14.97:0,15,244	1/1:0,7:7:21.05:264,21,0	0/1:3,6:9:5.09:254,0,5	1/1:2,7:9:16.72:236,17,0	1/1:2,9:11:24.07:325,24,0	1/1:6,11:13:33.11:442,33,0	1/1:3,9:12:10.38:365,10,0	1/1:3,1:4:6.02:82,6,0	0/0:4,0:4:6.02:0,6,116	0/0:10,0:11:30.02:0,30,543	0/0:13,0:13:36.02:0,36,683	0/0:15,0:19:54.12:0,54,942	1/1:6,7:11:26.97:319,27,0	0/1:5,17:22:4.46:648,0,4	1/1:3,17:20:54.02:689,54,0
chr10	14005898	.	G	GT	4859.74	PASS	AC=32;AF=0.593;AN=54;BaseQRankSum=8.404;DP=271;FS=0.000;HRun=6;HaplotypeScore=84.0487;InbreedingCoeff=0.8525;MQ=40.57;MQ0=10;MQRankSum=-9.082;QD=26.13;ReadPosRankSum=0.922;VQSLOD=4.9378;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:33.08:0,33,336	1/1:0,6:6:18.06:226,18,0	0/0:8,0:2:2.82:0,3,30	./.	1/1:2,7:9:21.06:257,21,0	0/0:1,0:5:8.89:0,9,27	0/0:0,0:2:4.72:0,5,17	1/1:16,9:21:5.52:363,6,0	1/1:3,4:7:15.03:172,15,0	1/1:2,9:11:31.88:361,32,0	1/1:1,10:10:30.09:361,30,0	0/0:2,0:2:6.01:0,6,61	0/0:4,0:4:12.03:0,12,122	0/0:7,0:6:15.03:0,15,153	1/1:2,4:6:15.01:172,15,0	1/1:1,7:8:22.31:267,22,0	1/1:2,7:9:19.87:225,20,0	1/1:5,10:15:26.10:346,26,0	1/1:6,10:13:30.10:376,30,0	1/1:3,8:11:24.08:301,24,0	1/1:1,2:3:3.01:32,3,0	0/0:2,0:2:6.01:0,6,61	0/0:8,0:8:15.03:0,15,153	0/0:10,0:10:30.07:0,30,306	0/0:19,0:19:45.10:0,45,459	1/1:4,6:8:18.06:227,18,0	1/1:6,15:20:30.34:574,30,0	1/1:1,17:18:48.15:601,48,0
chr10	14005912	.	G	GT	4037.67	PASS	AB=0.710;AC=29;AF=0.558;AN=52;BaseQRankSum=6.165;DP=233;FS=16.042;HRun=8;HaplotypeScore=72.4201;InbreedingCoeff=0.6994;MQ=40.92;MQ0=5;MQRankSum=-7.942;QD=25.24;ReadPosRankSum=-0.409;VQSLOD=2.4716;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:21:0,21,192	1/1:0,8:8:24.07:269,24,0	0/0:8,0:3:5.80:0,6,41	./.	1/1:0,7:7:21.06:242,21,0	0/1:2,0:5:8.92:9,0,29	0/0:0,0:3:7.36:0,7,33	1/1:10,8:16:26.98:309,27,0	1/1:2,4:6:18.03:189,18,0	1/1:0,10:10:30.09:346,30,0	1/1:1,9:10:27.08:307,27,0	0/0:2,0:2:3:0,3,27	0/0:3,0:3:8.99:0,9,77	0/0:5,0:4:9:0,9,82	1/1:2,4:6:12.03:131,12,0	0/1:3,6:9:0.56:180,0,1	1/1:3,4:7:9.50:105,9,0	1/1:2,13:15:39.03:430,39,0	1/1:5,7:12:24.07:276,24,0	0/1:1,8:9:0.37:244,0,0	./.	0/0:1,0:1:3:0,3,27	0/0:5,0:5:12.01:0,12,110	0/0:9,0:9:4.16:0,4,165	0/0:17,0:17:36.02:0,36,329	1/1:0,6:6:18.05:208,18,0	1/1:5,10:14:30.97:345,31,0	1/1:3,13:16:39.12:450,39,0
chr10	14005925	.	GATTTATTT	G	1448.78	PASS	AC=24;AF=0.667;AN=36;BaseQRankSum=1.067;DP=205;FS=27.762;HRun=0;HaplotypeScore=96.6926;InbreedingCoeff=0.5085;MQ=42.08;MQ0=7;MQRankSum=-3.820;QD=13.93;ReadPosRankSum=0.387;VQSLOD=0.7312;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:11:3.01:0,3,105	1/1:4,3:7:9.03:223,9,0	./.	./.	./.	0/0:10,0:10:17.55:0,18,382	0/0:3,0:3:2.98:0,3,22	./.	1/1:5,1:6:3.01:74,3,0	1/1:8,1:9:3.01:74,3,0	1/1:6,3:9:9.03:223,9,0	./.	./.	0/0:1,0:4:6.02:0,6,209	1/1:3,1:4:3.01:74,3,0	1/1:4,1:5:3.01:74,3,0	1/1:3,2:5:6.02:148,6,0	1/1:11,4:15:12.04:297,12,0	1/1:12,1:10:3.01:74,3,0	1/1:6,2:8:5.98:94,6,0	./.	./.	./.	0/0:8,0:8:3.01:0,3,65	0/0:7,0:12:12.04:0,12,360	./.	1/1:8,2:10:6.02:148,6,0	1/1:12,1:13:3.01:74,3,0
chr10	14006295	.	CACACACACAT	C	916.49	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=8.140;DP=504;FS=4.415;HRun=0;HaplotypeScore=165.2802;InbreedingCoeff=0.0966;MQ=58.71;MQ0=7;MQRankSum=-2.872;QD=4.11;ReadPosRankSum=-1.187;VQSLOD=2.5988;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:57.06:0,57,1727	0/0:6,0:6:9:0,9,96	0/0:35,0:23:14.32:0,14,292	0/0:33,0:18:24.47:0,24,243	0/0:14,0:14:24.23:0,24,205	1/1:16,5:21:26.88:243,27,0	1/1:20,2:21:31.75:336,32,0	0/0:25,0:24:23.69:0,24,389	0/1:25,0:25:83.31:83,0,154	0/1:18,0:17:63.15:63,0,170	0/0:15,0:15:17.95:0,18,168	0/0:12,0:12:17.98:0,18,270	0/0:12,0:12:14.40:0,14,441	0/0:13,0:13:18.51:0,19,510	0/1:13,0:12:52.58:53,0,171	0/1:13,0:13:27.83:28,0,131	0/1:22,0:21:4.60:5,0,133	0/1:27,0:27:99:217,0,136	0/0:15,0:15:5.36:0,5,177	0/0:5,0:5:5.99:0,6,49	0/1:34,0:33:8.54:9,0,223	0/0:13,0:13:17.58:0,18,319	0/0:8,0:8:17.96:0,18,434	0/0:27,0:26:66.06:0,66,1870	0/0:9,0:9:21.03:0,21,535	0/1:19,0:19:35.98:36,0,313	0/1:9,0:9:2.97:3,0,60	0/0:5,0:5:14:0,14,101
chr10	14006305	.	T	TAC	230.07	PASS	AB=0.958;AC=21;AF=0.420;AN=50;BaseQRankSum=-4.594;DP=500;FS=6.199;HRun=0;HaplotypeScore=114.2596;InbreedingCoeff=0.2686;MQ=50.81;MQ0=17;MQRankSum=1.250;QD=0.97;ReadPosRankSum=2.109;VQSLOD=1.8459;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:34,0:33:46.59:47,0,53	0/1:6,0:6:0:0,0,0	./.	./.	0/1:16,0:16:0:0,0,0	1/1:19,0:19:2.84:14,3,0	0/1:24,0:22:0.16:0,0,0	1/1:22,0:20:4.17:20,4,0	0/0:21,0:21:10.96:0,11,52	0/0:20,0:18:8.52:0,9,43	0/1:14,0:14:0:0,0,0	1/1:11,0:9:3:25,3,0	0/1:14,0:13:4.18:4,0,23	1/1:15,0:15:5:31,5,0	0/0:17,0:16:5.68:0,6,28	0/0:10,0:10:2.84:0,3,14	0/0:23,0:22:2.88:0,3,15	0/0:30,0:29:17.15:0,17,87	0/0:16,0:16:2.90:0,3,16	0/1:4,0:6:0:0,0,0	0/0:39,0:34:3.43:0,3,20	0/1:5,7:13:5.41:13,0,5	0/1:10,0:10:7.21:13,0,7	1/1:26,0:25:1.36:141,1,0	1/1:8,0:8:5.99:50,6,0	0/0:19,0:19:8.08:0,8,35	0/0:9,0:9:2.80:0,3,13	./.
chr10	14006336	.	ACACACACACGCGCG	A	4333.10	PASS	AB=0.775;AC=30;AF=0.600;AN=50;BaseQRankSum=7.450;DP=423;FS=11.044;HRun=0;HaplotypeScore=136.1166;InbreedingCoeff=0.6494;MQ=46.09;MQ0=17;MQRankSum=-2.601;QD=14.89;ReadPosRankSum=-0.756;VQSLOD=3.1834;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:33:57.05:0,57,1835	./.	./.	./.	0/0:3,6:10:0.47:0,0,1	1/1:21,0:21:8.30:160,8,0	1/1:24,0:21:8.80:155,9,0	1/1:16,0:15:6.54:132,7,0	1/1:3,15:18:12.04:415,12,0	1/1:2,19:19:30.53:680,31,0	0/1:2,9:10:0:0,0,0	0/0:11,0:9:10.55:0,11,268	0/0:8,0:7:10.43:0,10,406	0/0:15,0:15:20.55:0,21,431	1/1:5,9:12:6.49:237,6,0	1/1:3,4:7:3.01:129,3,0	1/1:4,17:19:3.01:114,3,0	1/1:4,27:30:26.95:779,27,0	1/1:8,10:18:23.57:502,24,0	0/0:7,0:7:0.47:0,0,1	1/1:36,0:29:9.01:168,9,0	0/1:12,0:12:14.56:15,0,309	0/0:10,0:10:17.91:0,18,435	0/0:24,0:22:56.38:0,56,1843	0/0:5,0:5:12.03:0,12,307	1/1:4,18:21:32.96:707,33,0	1/1:0,10:10:3.01:90,3,0	1/1:9,0:8:5.86:48,6,0
chr10	14006344	.	ACGCGCG	A	1957.43	PASS	AB=0.951;AC=26;AF=0.542;AN=48;BaseQRankSum=7.042;DP=401;FS=2.839;HRun=0;HaplotypeScore=97.1391;InbreedingCoeff=0.5042;MQ=52.81;MQ0=15;MQRankSum=-3.541;QD=8.12;ReadPosRankSum=0.227;VQSLOD=1.9545;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:30:41.79:0,42,606	./.	0/1:3,0:2:0.96:15,0,1	0/0:4,0:3:3.47:0,3,27	0/1:9,0:9:0:0,0,0	1/1:12,12:24:8.99:111,9,0	1/1:7,17:21:6.16:106,6,0	0/1:12,1:12:0.12:0,0,0	0/1:16,0:16:8.61:123,0,9	1/1:19,1:19:27.06:428,27,0	./.	0/0:9,0:8:10.35:0,10,135	0/0:9,0:8:11.93:0,12,241	0/0:14,0:14:8.51:0,9,76	1/1:12,0:10:6.49:86,6,0	1/1:4,0:4:3.01:54,3,0	1/1:20,0:18:3.01:39,3,0	1/1:30,0:29:17.91:306,18,0	1/1:17,0:17:21.04:363,21,0	./.	./.	0/1:12,0:12:14.48:14,0,148	0/0:9,0:9:11.78:0,12,120	0/0:23,0:21:41.27:0,41,551	0/0:4,0:4:2.92:0,3,17	1/1:19,1:19:26.69:453,27,0	1/1:10,0:10:2.84:15,3,0	0/1:5,2:7:0:0,0,0
chr10	14007563	.	A	ATGG	23398.62	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=8.372;DP=740;FS=0.591;HRun=0;HaplotypeScore=135.5477;InbreedingCoeff=0.9999;MQ=87.16;MQ0=0;MQRankSum=-6.412;QD=52.94;ReadPosRankSum=1.848;VQSLOD=6.7087;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,156,2453	1/1:2,9:11:33.11:719,33,0	0/0:31,0:31:78.23:0,78,1168	0/0:29,0:29:75.25:0,75,1153	1/1:3,15:19:42.14:925,42,0	1/1:2,13:16:42.03:830,42,0	1/1:5,23:27:57.11:1163,57,0	1/1:8,16:25:60.18:1238,60,0	1/1:3,18:21:60.21:1313,60,0	1/1:3,26:31:87.22:1748,87,0	1/1:3,15:19:42.01:924,42,0	0/0:33,0:33:96.33:0,96,1543	0/0:27,0:27:75.26:0,75,1200	0/0:22,0:22:57.18:0,57,891	1/1:6,21:28:63.22:1384,63,0	1/1:5,16:22:51.13:1051,51,0	1/1:4,34:39:99:2184,99,0	1/1:1,29:30:84.29:1852,84,0	1/1:3,23:26:72.23:1506,72,0	1/1:2,23:25:66.23:1454,66,0	1/1:6,38:47:89.74:1983,90,0	0/0:24,0:24:69.24:0,69,1104	0/0:26,0:26:72.25:0,72,1157	0/0:33,0:33:87.30:0,87,1398	0/0:19,0:19:51.17:0,51,820	1/1:4,22:26:69.24:1472,69,0	1/1:2,15:18:45.15:993,45,0	1/1:1,10:11:30.10:661,30,0
chr10	14009211	.	A	ATGTGTG	1871.92	PASS	AB=1.000;AC=27;AF=0.540;AN=50;BaseQRankSum=3.554;DP=495;FS=25.196;HRun=0;HaplotypeScore=121.3287;InbreedingCoeff=0.6592;MQ=68.72;MQ0=15;MQRankSum=-4.297;QD=8.36;ReadPosRankSum=-4.116;VQSLOD=-0.3240;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:15.89:0,16,241	1/1:7,0:6:3.01:74,3,0	./.	./.	1/1:15,0:15:3.01:62,3,0	0/0:14,0:14:15:0,15,256	0/0:27,0:27:18.06:0,18,347	1/1:19,0:19:3:27,3,0	1/1:11,0:10:3.11:71,3,0	1/1:23,0:23:22.13:392,22,0	./.	0/0:12,0:12:18.06:0,18,288	0/0:14,0:14:6.02:0,6,104	0/0:9,0:9:9.03:0,9,166	1/1:12,0:12:9.01:172,9,0	1/1:16,0:15:6.02:112,6,0	1/1:22,0:22:12.47:158,12,0	0/0:15,4:16:3.39:0,3,22	1/1:13,0:14:15.04:268,15,0	0/1:12,0:12:0:0,0,0	1/1:21,0:20:2.99:24,3,0	0/0:18,0:18:18.53:0,19,348	0/0:14,0:12:3:0,3,25	0/0:29,0:29:24.06:0,24,392	0/0:13,0:14:3.01:0,3,42	1/1:29,0:27:25.64:496,26,0	1/1:13,3:16:8.73:121,9,0	1/1:6,0:5:3.01:68,3,0
chr10	14009290	.	A	AGG	3682.54	PASS	AB=1.000;AC=32;AF=0.615;AN=52;BaseQRankSum=3.068;DP=341;FS=7.213;HRun=1;HaplotypeScore=66.1906;InbreedingCoeff=0.7904;MQ=57.05;MQ0=27;MQRankSum=-2.083;QD=14.85;ReadPosRankSum=1.465;VQSLOD=0.6805;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:8:20.59:0,21,160	0/0:1,0:1:0:0,0,0	0/0:25,0:14:27.88:0,28,306	0/1:23,0:11:0.27:0,0,129	1/1:8,0:8:19.72:152,20,0	1/1:10,0:10:20.86:159,21,0	1/1:18,0:16:35.49:291,35,0	1/1:17,0:19:42.37:365,42,0	1/1:9,0:7:17.86:151,18,0	1/1:0,11:11:20.80:169,21,0	1/1:10,0:9:14.49:103,14,0	0/0:6,0:5:8.85:0,9,62	0/0:4,0:3:5.92:0,6,41	0/0:7,0:6:11.96:0,12,109	1/1:5,0:5:14.87:105,15,0	1/1:23,0:22:51.03:410,51,0	1/1:19,0:20:56.72:534,57,0	./.	1/1:19,0:18:50.26:352,50,0	./.	1/1:20,0:15:29.77:257,30,0	0/0:9,0:9:21.34:0,21,134	0/0:8,0:6:8.98:0,9,78	0/1:16,0:17:10.27:31,0,10	0/0:10,0:9:14.38:0,14,101	1/1:2,0:14:9.45:223,9,0	1/1:10,0:10:23.47:208,23,0	1/1:9,0:7:20.94:174,21,0
chr10	14009544	.	A	AATGG	24029.70	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-12.883;DP=672;FS=14.811;HRun=0;HaplotypeScore=104.5190;InbreedingCoeff=0.9943;MQ=89.97;MQ0=0;MQRankSum=-9.745;QD=59.19;ReadPosRankSum=-0.818;VQSLOD=5.3898;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,111,2072	1/1:1,3:4:12.04:293,12,0	0/0:31,0:31:81.28:0,81,1469	0/0:26,0:26:69.24:0,69,1249	1/1:2,12:15:27.09:631,27,0	1/1:7,23:30:66.23:1663,66,0	1/1:7,24:31:75.26:1946,75,0	1/1:2,26:30:87.26:2088,87,0	1/1:2,18:21:54.15:1356,54,0	1/1:5,11:16:36.12:902,36,0	1/1:5,9:17:24.08:621,24,0	0/0:31,0:31:90.28:0,90,1618	0/0:20,0:20:57.18:0,57,1032	0/0:33,0:33:93.32:0,93,1736	1/1:3,18:20:54.14:1353,54,0	1/1:3,18:21:51.18:1331,51,0	1/1:7,24:32:69.24:1810,69,0	1/1:5,25:32:68.96:1775,69,0	1/1:6,17:23:63.20:1602,63,0	1/1:2,11:13:30.10:753,30,0	1/1:8,37:47:94.20:2323,94,0	0/0:19,0:19:54.18:0,54,970	0/0:23,0:23:57.18:0,57,1011	0/0:27,0:27:75.20:0,75,1334	0/0:15,0:15:42.14:0,42,775	1/1:1,24:25:69.24:1792,69,0	1/1:1,17:18:48.16:1279,48,0	1/1:2,8:10:21.07:512,21,0
chr10	14011421	.	GT	G	907.82	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.564;DP=630;FS=8.823;HRun=1;HaplotypeScore=135.0158;InbreedingCoeff=0.9930;MQ=85.15;MQ0=0;MQRankSum=-8.741;QD=23.89;ReadPosRankSum=0.599;VQSLOD=2.8002;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:75.24:0,75,1172	0/0:7,0:7:21.07:0,21,334	0/0:24,0:24:68.40:0,68,957	0/0:24,0:24:62.33:0,62,810	0/0:16,0:16:42.14:0,42,665	1/1:2,12:14:36.11:426,36,0	1/1:2,22:24:51.16:603,51,0	0/0:26,0:26:78.24:0,78,1164	0/0:19,0:19:54.17:0,54,838	0/0:21,0:21:57.19:0,57,908	0/0:9,0:9:24.08:0,24,376	0/0:21,0:21:63.21:0,63,1003	0/0:29,0:29:87.30:0,87,1386	0/0:28,0:28:84.29:0,84,1334	0/0:31,0:31:93.30:0,93,1459	0/0:19,0:19:57.18:0,57,886	0/0:32,0:32:96.30:0,96,1475	0/0:22,0:22:63.21:0,63,1006	0/0:19,0:19:57.19:0,57,906	0/0:15,0:15:45.14:0,45,692	0/0:86,0:86:99:0,256,4013	0/0:9,0:9:21.07:0,21,336	0/0:9,0:9:24.08:0,24,382	0/0:25,0:25:75.22:0,75,1146	0/0:12,0:11:33.11:0,33,526	0/0:28,0:28:81.24:0,81,1196	0/0:25,0:25:72.20:0,72,1121	0/0:9,0:9:27.09:0,27,431
chr10	14011429	.	CTGCTGG	C	1882.80	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.570;DP=648;FS=7.535;HRun=0;HaplotypeScore=200.9992;InbreedingCoeff=0.9963;MQ=81.61;MQ0=0;MQRankSum=-8.778;QD=58.84;ReadPosRankSum=0.891;VQSLOD=3.0880;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:78.27:0,78,2774	0/0:9,0:9:27.09:0,27,825	0/0:22,0:22:54.12:0,54,1560	0/0:20,0:21:44.88:0,45,1263	0/0:17,0:17:44.99:0,45,1592	1/1:1,11:12:33.11:790,33,0	1/1:2,18:20:51.18:1214,51,0	0/0:22,0:22:60.19:0,60,1766	0/0:18,0:18:54.19:0,54,1914	0/0:21,0:21:60.21:0,60,2070	0/0:11,0:11:30.09:0,30,993	0/0:22,0:22:63.22:0,63,2094	0/0:29,0:29:87.30:0,87,3018	0/0:28,0:28:81.28:0,81,2915	0/0:34,0:34:99:0,102,3669	0/0:19,0:19:54.19:0,54,1903	0/0:30,0:30:87.28:0,87,3016	0/0:23,0:23:69.24:0,69,2406	0/0:24,0:24:69.24:0,69,2332	0/0:18,0:18:51.17:0,51,1745	0/0:93,0:93:99:0,268,9094	0/0:10,0:10:24.08:0,24,835	0/0:9,0:9:23.75:0,24,760	0/0:27,0:27:78.27:0,78,2714	0/0:14,0:13:36.12:0,36,1294	0/0:29,0:29:87.30:0,87,3036	0/0:29,0:29:87.30:0,87,3032	0/0:9,0:9:27.09:0,27,973
chr10	14012623	.	CCCGT	C	4045.31	PASS	AB=0.552;AC=25;AF=0.463;AN=54;BaseQRankSum=6.489;DP=462;FS=21.914;HRun=0;HaplotypeScore=101.0679;InbreedingCoeff=0.7302;MQ=52.58;MQ0=8;MQRankSum=-7.357;QD=23.52;ReadPosRankSum=6.058;VQSLOD=1.6738;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,105,1881	1/1:0,8:8:4.02:101,4,0	0/0:24,0:12:33.06:0,33,566	0/0:24,0:15:6.49:0,6,501	0/0:1,11:12:0.37:0,0,1	0/0:15,0:15:4.65:0,5,107	1/1:20,0:18:0.41:26,0,0	1/1:7,14:20:54.02:849,54,0	1/1:8,3:11:14.46:258,14,0	1/1:0,16:16:45.14:802,45,0	1/1:3,4:7:2.43:24,2,0	0/0:18,0:18:27.63:0,28,647	0/0:17,0:15:24.01:0,24,383	0/0:15,0:15:38.69:0,39,600	0/0:0,13:13:0.82:0,1,1	1/1:10,4:14:8.58:239,9,0	0/1:2,13:16:2.72:303,0,3	1/1:2,8:10:14.63:205,15,0	1/1:6,8:14:32.69:469,33,0	0/0:1,11:11:0.89:0,1,2	./.	0/0:14,0:14:33.11:0,33,658	0/0:12,0:12:22:0,22,406	0/0:32,0:32:69.38:0,69,1397	0/0:13,0:13:26.27:0,26,310	1/1:1,10:10:24.05:408,24,0	1/1:5,13:18:8.61:244,9,0	1/1:2,2:4:9.02:116,9,0
chr10	14012624	.	CCGT	C	1971.36	PASS	AB=0.940;AC=23;AF=0.426;AN=54;BaseQRankSum=7.545;DP=456;FS=15.351;HRun=0;HaplotypeScore=101.9655;InbreedingCoeff=0.5474;MQ=52.30;MQ0=9;MQRankSum=-7.724;QD=10.43;ReadPosRankSum=5.467;VQSLOD=1.5235;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:45:90.21:0,90,1420	1/1:8,0:8:5.26:49,5,0	0/0:25,0:12:28.84:0,29,434	0/0:23,0:15:38.04:0,38,467	0/1:12,0:12:0.03:0,0,0	0/1:7,6:14:60.48:60,0,66	1/1:1,19:18:13.51:174,14,0	1/1:22,0:20:37.12:424,37,0	1/1:9,0:9:14.98:149,15,0	1/1:16,0:16:45.02:418,45,0	0/0:5,0:5:0.47:0,0,1	0/0:20,0:20:21.50:0,22,400	0/0:17,0:15:23.05:0,23,316	0/0:18,0:18:33.08:0,33,393	0/0:13,0:13:0.26:0,0,0	1/1:14,0:13:6.88:110,7,0	0/1:17,0:17:35.40:136,0,35	0/1:11,0:11:42.14:69,0,42	1/1:13,0:13:18.54:253,19,0	0/0:12,0:11:0.47:0,0,1	./.	0/0:14,0:14:33.03:0,33,476	0/0:11,0:11:18.53:0,19,327	0/0:32,0:32:63.40:0,63,1057	0/0:11,0:11:16.33:0,16,162	1/1:11,0:10:19.64:189,20,0	0/1:18,0:18:41.20:90,0,41	1/1:4,0:4:5.71:36,6,0
chr10	14012625	.	CGT	C	1387.89	PASS	AB=0.984;AC=21;AF=0.404;AN=52;BaseQRankSum=7.382;DP=513;FS=0.554;HRun=0;HaplotypeScore=114.1526;InbreedingCoeff=0.2218;MQ=49.43;MQ0=11;MQRankSum=-5.439;QD=5.38;ReadPosRankSum=3.260;VQSLOD=2.9869;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:69.17:0,69,891	1/1:10,0:9:5.54:38,6,0	0/0:25,0:12:20.15:0,20,247	0/0:23,0:15:31.99:0,32,288	0/0:19,0:19:0:0,0,1	0/1:17,0:17:13.90:14,0,67	1/1:20,0:19:14.78:98,15,0	0/1:26,1:24:25.92:295,0,26	1/1:12,0:12:14.58:125,15,0	0/1:23,0:21:42.62:276,0,43	./.	0/1:18,0:18:5.65:6,0,126	0/0:17,0:15:15.67:0,16,208	0/0:17,0:17:14.63:0,15,190	0/1:16,0:15:0.07:0,0,0	1/1:16,1:16:6.62:89,7,0	0/1:26,0:25:68.17:112,0,68	0/1:14,0:12:48.47:48,0,49	0/1:15,2:16:11.64:206,0,12	./.	0/0:23,0:20:0:0,0,0	0/0:15,0:15:15.05:0,15,235	0/0:10,0:10:15.04:0,15,216	0/0:31,0:31:44.56:0,45,551	0/0:11,0:11:5.94:0,6,42	1/1:15,0:11:10.40:153,10,0	0/1:21,0:21:15.58:66,0,16	1/1:5,0:4:2.99:23,3,0
chr10	14012659	.	TGA	T	811.49	PASS	AB=1.000;AC=32;AF=0.667;AN=48;BaseQRankSum=5.554;DP=448;FS=4.836;HRun=0;HaplotypeScore=105.9928;InbreedingCoeff=0.1368;MQ=41.71;MQ0=14;MQRankSum=-0.518;QD=2.55;ReadPosRankSum=-2.001;VQSLOD=1.8492;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,10:43:15.60:0,16,299	0/1:7,0:6:0:0,0,0	./.	./.	1/1:17,0:17:5.41:38,5,0	0/1:26,0:25:14.17:69,0,14	1/1:21,1:21:14.25:87,14,0	./.	1/1:13,1:13:11.28:67,11,0	1/1:15,0:14:6.50:33,6,0	1/1:9,0:8:5.92:41,6,0	0/1:17,0:17:52.98:53,0,142	0/1:21,0:19:57.61:132,0,58	0/0:19,0:19:20.53:0,21,216	1/1:19,1:19:15.46:97,15,0	1/1:17,0:16:0.48:41,0,0	0/1:19,0:18:23.76:28,0,24	0/1:9,0:6:14.63:24,0,15	1/1:10,0:9:5.88:41,6,0	./.	1/1:19,0:17:2.65:20,3,0	0/0:18,0:18:11.76:0,12,97	0/1:18,0:18:22.12:22,0,89	0/1:28,0:28:20.99:21,0,150	0/0:14,0:14:12:0,12,120	1/1:6,0:3:5.91:38,6,0	1/1:18,0:18:14.58:94,15,0	1/1:3,0:2:2.96:19,3,0
chr10	14014614	.	CCCTGT	C	13016.54	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=15.234;DP=541;FS=7.556;HRun=0;HaplotypeScore=132.3248;InbreedingCoeff=0.9554;MQ=83.57;MQ0=0;MQRankSum=-16.460;QD=42.54;ReadPosRankSum=1.702;VQSLOD=4.8960;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,120,3468	1/1:3,0:3:3.01:39,3,0	0/0:19,0:19:54.18:0,54,1425	0/0:26,0:26:66.23:0,66,1897	1/1:1,12:13:20.74:373,21,0	1/1:2,14:16:33.11:629,33,0	1/1:4,19:23:48.16:966,48,0	1/1:3,12:15:36.12:714,36,0	1/1:5,16:21:42.14:853,42,0	1/1:0,16:16:45.15:935,45,0	1/1:1,7:8:15.05:319,15,0	0/0:20,0:20:57.20:0,57,1695	0/0:20,0:20:60.21:0,60,1846	0/0:24,0:24:69.24:0,69,2108	1/1:1,22:23:60.21:1278,60,0	1/1:3,14:17:39.13:806,39,0	1/1:3,23:26:51.13:1032,51,0	1/1:1,22:23:51.14:998,51,0	1/1:4,18:22:54.18:1112,54,0	1/1:0,9:9:24.08:511,24,0	1/1:4,32:36:50.84:1046,51,0	0/0:20,0:20:48.16:0,48,1478	0/0:14,0:14:39.13:0,39,1221	0/0:33,0:33:99:0,99,3018	0/0:17,0:17:48.16:0,48,1440	1/1:3,12:15:36.12:767,36,0	1/1:4,12:16:24.08:511,24,0	1/1:0,4:4:6.02:128,6,0
chr10	14016817	.	AGCAGTGGGTAGCAGGTGG	A	1363.80	PASS	AB=1.000;AC=28;AF=0.538;AN=52;BaseQRankSum=8.353;DP=537;FS=3.175;HRun=0;HaplotypeScore=94.6746;InbreedingCoeff=0.6174;MQ=31.87;MQ0=195;MQRankSum=-2.170;QD=4.49;ReadPosRankSum=-3.883;VQSLOD=0.9926;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:14:29.88:0,30,394	1/1:14,0:5:14.81:101,15,0	0/0:22,0:3:4.19:0,4,21	0/0:17,0:3:8.89:0,9,70	1/1:8,0:3:2.99:24,3,0	1/1:15,0:7:14.95:155,15,0	1/1:13,0:7:20.78:173,21,0	./.	0/1:24,0:10:73.39:107,0,73	1/1:26,0:5:11.96:99,12,0	1/1:5,0:3:2.98:21,3,0	0/0:21,0:17:45.04:0,45,1335	0/0:21,0:17:36.12:0,36,1522	0/0:20,0:16:36.12:0,36,1307	0/1:21,0:11:19:19,0,24	0/1:19,0:5:0.03:0,0,0	1/1:27,0:17:8.38:42,8,0	0/1:13,0:9:4.39:69,0,4	1/1:19,0:3:8.97:86,9,0	./.	1/1:56,0:13:14.71:95,15,0	0/0:13,0:9:11.95:0,12,142	0/0:8,0:3:5.99:0,6,97	0/0:35,0:23:38.80:0,39,1028	0/0:18,0:13:39.08:0,39,802	1/1:13,9:9:23.91:214,24,0	1/1:11,0:8:8.99:192,9,0	1/1:11,0:9:12.01:156,12,0
chr10	14016899	.	T	TC	1398.02	PASS	AB=0.842;AC=21;AF=0.375;AN=56;BaseQRankSum=-2.063;DP=432;FS=75.757;HRun=0;HaplotypeScore=51.1318;InbreedingCoeff=-0.2045;MQ=44.27;MQ0=57;MQRankSum=-3.657;QD=5.01;ReadPosRankSum=4.867;VQSLOD=0.5863;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:33:91.91:0,92,748	1/1:5,4:11:23.57:173,24,0	0/0:11,0:3:5.48:0,5,24	0/1:11,0:6:5.47:5,0,59	0/1:12,5:15:60.68:140,0,61	0/1:10,0:10:10.23:10,0,58	0/1:15,0:12:3.39:3,0,113	0/1:15,2:15:65.68:116,0,66	0/1:11,2:11:23.69:110,0,24	0/1:11,2:10:1.23:105,0,1	0/1:7,5:11:45.43:45,0,76	0/0:13,0:8:17.99:0,18,162	0/0:11,0:6:17.87:0,18,137	0/0:14,0:7:17.66:0,18,125	0/1:6,1:9:28.54:40,0,29	0/1:7,0:5:29:29,0,44	0/1:15,12:23:99:135,0,112	0/1:12,9:19:4.24:91,0,4	1/1:6,1:5:6.02:56,6,0	0/1:12,6:16:44.70:171,0,45	0/1:7,4:6:7.55:82,0,8	0/0:11,0:8:20.92:0,21,182	0/0:9,0:6:17.88:0,18,151	0/0:23,0:19:23.78:0,24,183	0/0:19,0:13:33.99:0,34,271	0/1:19,0:15:11.21:11,0,92	0/1:11,1:12:43.70:57,0,44	0/1:17,3:17:13.02:180,0,13
chr10	14020065	.	T	TTTTG	1666.44	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-4.860;DP=781;FS=0.744;HRun=0;HaplotypeScore=125.5311;InbreedingCoeff=0.9813;MQ=67.78;MQ0=1;MQRankSum=-2.225;QD=39.68;ReadPosRankSum=-0.266;VQSLOD=3.7809;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:71.26:0,71,1097	0/0:8,0:8:18.06:0,18,294	0/0:35,0:27:24.08:0,24,384	0/0:32,0:28:15.09:0,15,356	0/0:28,0:28:66.23:0,66,1077	1/1:6,12:18:36.12:874,36,0	1/1:10,14:24:39.13:914,39,0	0/0:32,0:32:45.15:0,45,703	0/0:26,0:26:63.19:0,63,965	0/0:30,0:30:54.18:0,54,882	0/0:22,0:22:48.15:0,48,751	0/0:32,0:32:72.25:0,72,1176	0/0:27,0:27:57.18:0,57,902	0/0:26,0:26:48.16:0,48,775	0/0:36,0:36:75.25:0,75,1193	0/0:20,0:20:42.14:0,42,677	0/0:32,0:32:72.25:0,72,1162	0/0:23,0:22:18.89:0,19,528	0/0:37,0:37:42.14:0,42,665	0/0:28,0:28:42.12:0,42,640	0/0:34,0:34:69.23:0,69,1118	0/0:25,0:25:54.18:0,54,881	0/0:24,0:24:54.18:0,54,865	0/0:35,0:35:78.27:0,78,1256	0/0:23,0:23:39.13:0,39,629	0/0:37,0:37:70.68:0,71,1143	0/0:37,0:37:81.25:0,81,1288	0/0:21,0:21:21.07:0,21,343
chr10	14022069	.	TC	T	13019.35	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=8.044;DP=588;FS=4.004;HRun=1;HaplotypeScore=64.1241;InbreedingCoeff=0.9760;MQ=89.25;MQ0=0;MQRankSum=-3.108;QD=39.45;ReadPosRankSum=3.167;VQSLOD=5.6449;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:84.24:0,84,1286	1/1:0,10:10:27.09:377,27,0	0/0:22,0:22:55.67:0,56,861	0/0:24,0:24:66.16:0,66,969	1/1:0,18:18:54.18:755,54,0	0/0:12,0:12:33.10:0,33,504	0/0:36,0:36:99:0,105,1652	1/1:0,20:20:60.19:821,60,0	1/1:0,24:24:63.21:880,63,0	1/1:0,16:16:48.15:655,48,0	1/1:0,10:10:24.08:336,24,0	0/0:15,0:15:45.15:0,45,719	0/0:22,0:22:66.23:0,66,1055	0/0:25,0:25:75.26:0,75,1199	1/1:0,17:17:51.17:713,51,0	1/1:0,24:24:72.24:1007,72,0	1/1:0,34:34:99:1385,99,0	1/1:2,31:33:3.39:1204,3,0	1/1:0,19:19:57.19:793,57,0	1/1:0,17:17:48.16:671,48,0	1/1:0,47:47:99:1762,126,0	0/0:11,0:11:33.11:0,33,520	0/0:12,0:12:30.10:0,30,480	0/0:26,0:26:78.27:0,78,1230	0/0:24,0:24:72.23:0,72,1128	1/1:0,20:20:57.16:777,57,0	1/1:0,14:14:42.14:587,42,0	1/1:0,7:7:21.07:294,21,0
chr10	14023210	.	A	AAG	1723.47	PASS	AB=0.921;AC=43;AF=0.827;AN=52;BaseQRankSum=1.340;DP=478;FS=1.549;HRun=0;HaplotypeScore=91.3884;InbreedingCoeff=0.0488;MQ=62.19;MQ0=4;MQRankSum=-1.134;QD=4.17;ReadPosRankSum=-1.171;VQSLOD=2.5489;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:17,6:25:64.09:74,0,64	./.	./.	0/1:25,0:11:0:1,0,0	0/0:14,0:14:5.81:0,6,46	1/1:18,0:18:9.02:112,9,0	1/1:19,0:19:3:25,3,0	1/1:20,0:20:11.90:125,12,0	1/1:14,0:14:3:27,3,0	1/1:14,0:14:12.02:131,12,0	1/1:5,0:5:2.88:15,3,0	1/1:7,8:15:3.01:45,3,0	1/1:8,0:11:3:26,3,0	1/1:15,0:15:3:27,3,0	1/1:17,0:17:9.01:86,9,0	1/1:11,0:11:6.01:55,6,0	1/1:23,0:23:24.02:221,24,0	0/1:20,0:20:10.71:46,0,11	1/1:19,0:19:6.87:47,7,0	0/1:19,0:19:17.15:108,0,17	1/1:21,0:21:5.84:62,6,0	0/1:11,2:14:23.48:80,0,23	0/0:18,0:18:0:0,0,0	1/1:22,0:22:9.03:121,9,0	1/1:12,5:18:6.02:89,6,0	1/1:15,0:15:18.89:204,19,0	1/1:18,0:18:3:28,3,0	1/1:15,0:14:9.48:89,9,0
chr10	14023252	.	G	GAGAT	5680.05	PASS	AB=0.882;AC=34;AF=0.607;AN=56;BaseQRankSum=-2.876;DP=588;FS=31.807;HRun=0;HaplotypeScore=114.3410;InbreedingCoeff=0.3138;MQ=66.58;MQ0=19;MQRankSum=-3.132;QD=13.96;ReadPosRankSum=-1.953;VQSLOD=2.3949;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:43.69:0,44,446	1/1:4,0:4:12.01:142,12,0	0/0:41,0:18:30.21:0,30,311	0/0:51,0:22:40.17:0,40,338	0/1:18,0:17:30.33:93,0,30	0/1:20,0:20:99:120,0,202	0/0:24,0:24:46.68:0,47,391	1/1:34,0:32:83.09:757,83,0	1/1:3,11:17:6.02:147,6,0	1/1:22,0:22:47.88:626,48,0	1/1:5,0:16:3.01:68,3,0	0/0:13,0:13:17.87:0,18,142	0/1:13,0:13:99:120,0,159	0/1:18,0:18:44.81:45,0,209	1/1:3,13:16:11.65:329,12,0	1/1:0,14:16:5.97:166,6,0	1/1:3,30:38:24.55:667,25,0	0/1:2,14:17:9.53:159,0,10	1/1:2,16:21:62.41:545,62,0	0/1:1,7:10:19.43:254,0,19	1/1:3,27:36:5.53:107,6,0	0/0:14,0:14:6.86:0,7,212	0/1:14,0:14:13.72:14,0,127	0/1:13,0:13:60.05:90,0,60	0/0:13,0:13:13.62:0,14,122	1/1:23,0:23:62.15:711,62,0	1/1:7,9:19:8.98:196,9,0	1/1:5,12:21:16.75:325,17,0
chr10	14024007	.	C	CACACACACACAA	10038.89	PASS	AB=0.981;AC=31;AF=0.554;AN=56;BaseQRankSum=9.736;DP=873;FS=12.237;HRun=0;HaplotypeScore=297.1663;InbreedingCoeff=0.8369;MQ=52.12;MQ0=14;MQRankSum=-5.076;QD=19.88;ReadPosRankSum=-3.295;VQSLOD=2.0911;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:42:48.97:0,49,1271	1/1:10,0:10:23.74:187,24,0	0/0:31,0:6:11.19:0,11,87	0/0:43,0:18:32.78:0,33,312	1/1:30,0:30:58.15:666,58,0	0/0:29,0:28:8.85:0,9,635	0/0:29,0:29:39.80:0,40,732	1/1:44,0:41:99:969,103,0	1/1:4,24:41:2.92:135,3,0	1/1:5,0:30:57.95:667,58,0	1/1:7,0:25:24.60:251,25,0	0/0:32,0:32:67.86:0,68,1016	0/0:16,0:16:17.76:0,18,578	0/0:22,0:22:23.19:0,23,716	1/1:6,22:38:2.02:276,2,0	1/1:3,25:35:18.03:524,18,0	1/1:42,0:42:61.86:1182,62,0	1/1:22,0:19:35.26:652,35,0	1/1:24,0:22:59.44:777,59,0	1/1:27,0:25:42.03:460,42,0	0/1:52,0:50:6.70:729,0,7	0/0:29,0:28:57.28:0,57,1032	0/0:22,0:22:51.46:0,51,777	0/0:48,0:48:75.88:0,76,1550	0/0:22,0:22:1.11:0,1,707	1/1:46,1:46:99:1990,108,0	1/1:6,0:28:15.93:402,16,0	1/1:8,0:8:17.94:172,18,0
chr10	14024014	.	ACT	A	226.60	PASS	AB=0.952;AC=9;AF=0.161;AN=56;BaseQRankSum=5.082;DP=877;FS=32.412;HRun=0;HaplotypeScore=205.1185;InbreedingCoeff=-0.1986;MQ=53.29;MQ0=13;MQRankSum=-3.433;QD=0.80;ReadPosRankSum=-3.013;VQSLOD=1.0396;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:69.69:0,70,981	0/1:9,0:9:7.10:7,0,100	0/0:37,0:8:18.18:0,18,160	0/0:44,0:18:26.98:0,27,397	0/0:31,0:31:31.26:0,31,512	0/0:27,0:26:7.96:0,8,544	0/0:32,0:32:38.69:0,39,693	0/0:40,6:44:11.13:0,11,914	0/0:39,0:39:11.97:0,12,97	0/0:30,0:30:36.47:0,36,750	0/0:19,0:18:15.62:0,16,186	0/0:29,1:30:80.95:0,81,940	0/0:23,0:23:61.77:0,62,623	0/0:22,0:22:21.90:0,22,560	0/0:33,2:35:2.21:0,2,86	0/1:33,1:34:19.86:20,0,82	0/1:49,0:49:11.39:11,0,677	0/1:21,0:19:87.22:87,0,157	0/1:10,10:19:82.30:82,0,238	0/0:24,1:23:3.08:0,3,309	0/1:51,3:51:19.48:19,0,572	0/0:28,0:27:59.65:0,60,860	0/0:23,0:23:28.14:0,28,531	0/0:52,0:52:58.34:0,58,1227	0/1:20,0:20:0.03:0,0,472	0/1:47,0:47:90.61:91,0,778	0/1:29,0:29:38.41:38,0,55	0/0:8,0:8:23.90:0,24,215
chr10	14024227	.	A	AAC	28805.02	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-12.153;DP=1181;FS=0.000;HRun=0;HaplotypeScore=150.2746;InbreedingCoeff=0.9930;MQ=56.40;MQ0=23;MQRankSum=1.850;QD=38.10;ReadPosRankSum=-1.639;VQSLOD=5.6648;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:43:99:0,105,1324	1/1:2,7:8:18.06:296,18,0	0/0:32,0:9:15.01:0,15,193	0/0:38,0:8:14.42:0,14,198	1/1:6,20:26:57.20:987,57,0	1/1:6,36:42:93.32:1608,93,0	1/1:3,47:51:99:1972,114,0	1/1:9,36:41:99:1715,105,0	1/1:8,61:67:99:2438,141,0	1/1:7,51:55:99:2540,150,0	1/1:3,19:25:57.20:986,57,0	0/0:53,0:53:99:0,140,1933	0/0:48,0:48:99:0,135,1769	0/0:40,0:40:99:0,108,1422	1/1:10,59:69:99:2683,141,0	1/1:1,51:52:99:2219,129,0	1/1:9,18:27:49.04:999,49,0	1/1:10,18:26:36.87:1012,37,0	1/1:6,16:19:48.16:813,48,0	1/1:3,36:39:93.32:1594,93,0	1/1:24,59:79:99:3261,179,0	0/0:43,0:43:99:0,120,1597	0/0:43,0:43:99:0,117,1542	0/0:51,0:51:99:0,124,1631	0/0:34,0:34:93.29:0,93,1219	1/1:7,48:54:99:2252,132,0	1/1:4,22:25:45.15:779,45,0	1/1:2,20:21:20.78:654,21,0
chr10	14024436	.	TCA	T	18807.14	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=13.548;DP=1160;FS=0.486;HRun=0;HaplotypeScore=189.8839;InbreedingCoeff=0.9835;MQ=53.82;MQ0=21;MQRankSum=-2.733;QD=29.07;ReadPosRankSum=1.336;VQSLOD=5.3182;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,131,2200	1/1:4,4:8:15.05:196,15,0	0/0:31,0:9:20.65:0,21,267	0/0:19,1:4:8.24:0,8,100	1/1:9,19:27:66.19:863,66,0	0/0:42,0:42:99:0,114,1904	0/0:45,0:45:99:0,117,2088	1/1:17,27:36:66.67:861,67,0	1/1:7,39:45:97.27:1528,97,0	1/1:22,43:61:99:2103,159,0	1/1:9,29:38:82.15:1060,82,0	0/0:55,0:55:99:0,141,2415	0/0:65,0:65:99:0,181,3022	0/0:42,0:42:99:0,123,2014	1/1:13,50:63:99:2070,156,0	1/1:2,43:45:99:1550,120,0	1/1:6,23:28:68.71:896,69,0	1/1:14,14:30:12.25:649,12,0	1/1:6,23:22:37.03:746,37,0	1/1:11,18:29:63.15:809,63,0	1/1:28,59:85:99:2620,194,0	0/0:42,0:42:99:0,103,1682	0/0:28,0:28:75.23:0,75,1267	0/0:61,0:61:99:0,143,2430	0/0:27,0:26:80.62:0,81,1315	1/1:14,30:43:99:1430,108,0	1/1:1,27:28:57.19:770,57,0	1/1:19,15:33:38.99:657,39,0
chr10	14024508	.	T	TCA	23548.20	PASS	AB=1.000;AC=33;AF=0.589;AN=56;BaseQRankSum=4.485;DP=1190;FS=2.361;HRun=0;HaplotypeScore=217.8937;InbreedingCoeff=0.9370;MQ=52.67;MQ0=29;MQRankSum=-3.722;QD=32.44;ReadPosRankSum=-0.788;VQSLOD=4.8176;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:59,0:57:99:0,144,1775	1/1:3,12:15:33.11:543,33,0	0/0:31,0:13:26.48:0,26,280	0/1:52,0:10:7.58:8,0,177	1/1:9,23:31:68.66:1136,69,0	0/0:30,0:29:52.13:0,52,772	0/0:43,0:42:99:0,105,1313	1/1:40,18:44:75.70:1263,76,0	1/1:7,32:40:84.27:1396,84,0	1/1:6,58:64:99:2443,150,0	1/1:9,18:27:43.13:756,43,0	0/0:49,0:48:99:0,126,1621	0/0:58,0:58:99:0,150,1916	0/0:37,0:37:99:0,99,1244	1/1:16,52:67:99:2668,160,0	1/1:11,32:43:86.61:1643,87,0	1/1:12,25:37:94.84:1521,95,0	1/1:11,27:37:88.85:1529,89,0	1/1:11,8:12:30.09:476,30,0	1/1:7,27:36:60.21:1014,60,0	1/1:31,68:97:99:3613,219,0	0/0:46,0:46:99:0,111,1425	0/0:38,0:37:78.20:0,78,982	0/0:51,0:51:99:0,122,1564	0/0:22,0:22:52.75:0,53,624	1/1:18,31:48:99:1741,108,0	1/1:8,21:29:66.20:1085,66,0	1/1:2,17:18:42.14:714,42,0
chr10	14024656	.	T	TGC	9743.40	PASS	AB=0.683;AC=25;AF=0.446;AN=56;BaseQRankSum=10.171;DP=969;FS=45.496;HRun=0;HaplotypeScore=262.6087;InbreedingCoeff=0.3990;MQ=53.32;MQ0=23;MQRankSum=-6.808;QD=21.27;ReadPosRankSum=0.589;VQSLOD=3.6065;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:43:99:0,101,1690	0/1:4,5:8:22.24:224,0,22	0/0:51,0:10:23.53:0,24,285	0/0:47,0:17:28.80:0,29,302	1/1:0,2:25:6.02:108,6,0	0/0:23,0:23:63.14:0,63,947	0/0:49,0:48:99:0,114,1730	1/1:31,13:34:13.38:1075,13,0	1/1:18,14:32:11.87:992,12,0	0/1:20,13:30:22.11:1149,0,22	1/1:2,2:20:2.53:60,3,0	0/0:42,0:41:99:0,114,1764	0/0:40,0:40:99:0,111,1723	0/0:44,0:44:99:0,121,1955	1/1:12,13:23:3.75:321,4,0	0/1:12,19:30:50.39:860,0,50	0/1:20,10:30:99:583,0,277	0/1:16,8:26:99:759,0,145	1/1:13,8:14:35.77:636,36,0	1/1:2,3:30:4.19:82,4,0	0/1:34,26:61:51.01:705,0,51	0/0:33,0:32:93.30:0,93,1438	0/0:42,0:39:99:0,105,1622	0/0:59,0:58:99:0,144,2211	0/0:35,0:35:87.19:0,87,1253	1/1:6,4:44:54.26:1427,54,0	1/1:8,6:14:30.10:548,30,0	0/1:2,5:7:21.64:215,0,22
chr10	14024666	.	CAT	C	1143.27	PASS	AB=0.889;AC=14;AF=0.250;AN=56;BaseQRankSum=10.547;DP=880;FS=3.600;HRun=0;HaplotypeScore=264.4115;InbreedingCoeff=-0.1433;MQ=48.98;MQ0=24;MQRankSum=-9.816;QD=3.57;ReadPosRankSum=-3.890;VQSLOD=2.1883;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:39:99:0,106,1855	0/1:6,3:8:4.39:97,0,4	0/0:34,0:6:8.47:0,8,127	0/0:31,0:11:6.88:0,7,101	0/0:27,0:26:7.22:0,7,60	0/0:23,0:23:57.19:0,57,1097	0/0:43,1:43:99:0,108,1913	0/0:39,0:26:24.48:0,24,219	0/1:19,4:23:8.43:227,0,8	0/1:25,2:23:78.94:79,0,267	1/1:19,1:20:3.72:38,4,0	0/0:40,0:39:99:0,104,1957	0/0:41,0:41:99:0,111,2009	0/0:47,0:47:99:0,134,2561	0/1:19,3:20:13.27:90,0,13	0/1:25,5:28:99:148,0,110	0/1:23,5:28:94.86:226,0,95	0/1:21,2:23:99:138,0,103	0/1:18,1:14:23.25:23,0,133	0/0:31,0:30:4.15:0,4,23	0/1:47,7:51:95.61:106,0,96	0/0:34,0:33:88.18:0,88,1599	0/0:41,0:38:99:0,108,2033	0/0:59,0:58:99:0,123,2682	0/0:27,0:27:66.22:0,66,1279	0/1:47,0:43:36.99:37,0,215	0/1:10,1:11:39.27:49,0,39	0/1:6,1:7:11.55:39,0,12
chr10	14024677	.	ACAC	A	2354.02	PASS	AB=0.839;AC=16;AF=0.286;AN=56;BaseQRankSum=9.153;DP=831;FS=11.233;HRun=0;HaplotypeScore=258.7136;InbreedingCoeff=-0.2097;MQ=47.57;MQ0=26;MQRankSum=-10.857;QD=7.18;ReadPosRankSum=-2.891;VQSLOD=1.0564;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:40:99:0,100,2341	0/1:6,3:9:30.80:137,0,31	0/0:18,0:1:3.01:0,3,39	0/0:22,0:7:1.17:0,1,32	0/0:28,1:28:5.71:0,6,81	0/0:25,0:24:42.14:0,42,984	0/0:45,0:44:83.12:0,83,1933	0/0:32,0:17:12.04:0,12,209	0/1:14,6:19:61.97:308,0,62	0/1:23,5:22:99:334,0,539	1/1:20,1:21:3:57,3,0	0/0:43,0:42:99:0,105,2436	0/0:39,0:39:99:0,108,2433	0/0:47,0:47:99:0,129,3037	0/1:13,5:16:43.59:137,0,44	0/1:17,5:20:99:215,0,174	0/1:23,5:27:99:293,0,211	0/1:16,3:20:99:256,0,365	0/1:15,3:11:99:110,0,277	1/1:28,1:28:0.45:1,0,0	0/1:38,8:49:99:212,0,150	0/0:32,0:31:81.28:0,81,1819	0/0:38,0:34:93.32:0,93,2166	0/0:60,0:59:99:0,147,3145	0/0:30,0:30:75.21:0,75,1623	0/1:45,0:41:99:202,0,273	0/1:9,3:12:99:201,0,179	0/1:5,1:6:43.66:44,0,55
chr10	14024680	.	C	CAT	1311.77	PASS	AB=0.906;AC=14;AF=0.259;AN=54;BaseQRankSum=9.582;DP=799;FS=5.175;HRun=0;HaplotypeScore=262.7015;InbreedingCoeff=-0.1173;MQ=47.90;MQ0=23;MQRankSum=-10.574;QD=3.98;ReadPosRankSum=-6.939;VQSLOD=0.8516;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:40:96.59:0,97,1506	0/1:5,1:8:13.39:66,0,13	./.	0/0:16,0:5:2.74:0,3,12	0/1:27,0:26:0:0,0,0	0/0:26,0:25:39.13:0,39,632	0/0:43,0:42:83.86:0,84,1267	0/0:26,2:13:5.69:0,6,59	0/1:18,2:19:25.73:159,0,26	0/1:22,3:19:94.98:187,0,95	0/0:21,0:21:2.02:0,2,11	0/0:44,0:43:99:0,108,1607	0/0:38,0:38:99:0,105,1600	0/0:46,0:46:99:0,118,1952	0/1:11,2:12:13.94:80,0,14	0/1:22,2:22:64.01:98,0,64	0/1:26,3:28:75.70:166,0,76	0/1:16,1:17:49.14:49,0,156	0/1:15,0:8:3.46:70,0,3	0/1:36,0:35:0.05:0,0,0	0/1:46,2:46:40.64:141,0,41	0/0:32,0:31:78.18:0,78,1097	0/0:35,0:31:90.26:0,90,1390	0/0:56,0:56:60.79:0,61,1911	0/0:29,0:29:69.15:0,69,976	0/1:44,1:41:36.12:213,0,36	0/1:16,0:16:6.39:105,0,6	0/1:2,4:6:1.58:118,0,2
chr10	14024691	.	A	ACATG	3841.70	PASS	AB=0.975;AC=22;AF=0.423;AN=52;BaseQRankSum=10.876;DP=814;FS=18.546;HRun=0;HaplotypeScore=299.4724;InbreedingCoeff=0.1812;MQ=45.32;MQ0=27;MQRankSum=-9.521;QD=8.73;ReadPosRankSum=-5.775;VQSLOD=0.9829;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:39:99:0,99,1852	1/1:9,0:9:11.46:95,11,0	./.	./.	1/1:29,0:28:6.02:90,6,0	0/0:25,0:24:36.12:0,36,713	0/0:35,0:33:57.13:0,57,1136	0/1:45,0:27:99:434,0,101	1/1:21,0:20:37.64:405,38,0	0/1:28,0:23:99:425,0,148	1/1:23,0:23:8.17:115,8,0	0/0:40,0:40:98.96:0,99,1890	0/0:34,0:34:90.27:0,90,1742	0/0:42,0:42:99:0,105,2087	1/1:17,0:17:18.47:240,18,0	0/1:26,0:24:30.16:273,0,30	0/1:32,0:32:99:310,0,102	0/1:20,1:22:99:307,0,288	0/1:17,0:8:99:125,0,182	1/1:39,0:38:8.95:124,9,0	0/1:51,6:54:42.32:269,0,42	0/0:27,0:26:75.26:0,75,1482	0/0:31,0:29:84.29:0,84,1625	0/0:47,0:49:99:0,127,2291	0/0:31,0:31:72.23:0,72,1350	0/1:45,0:41:17.11:354,0,17	0/1:19,0:20:77.18:258,0,77	0/1:6,0:6:7.43:19,0,7
chr10	14024746	.	TTCACACACACA	T	546.78	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=0.634;DP=897;FS=1.259;HRun=0;HaplotypeScore=391.5865;InbreedingCoeff=0.9375;MQ=50.17;MQ0=6;MQRankSum=-4.368;QD=8.96;ReadPosRankSum=-1.864;VQSLOD=0.7027;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:96.02:0,96,4797	0/0:11,0:11:21.07:0,21,619	0/0:50,0:20:51.14:0,51,1711	0/0:32,0:12:30.06:0,30,1161	0/0:24,0:24:38.53:0,39,1250	1/1:1,27:28:23.94:459,24,0	1/1:2,31:31:5.96:199,6,0	0/0:26,0:22:29.35:0,29,638	0/0:44,0:44:86.01:0,86,2706	0/0:39,0:37:90.07:0,90,2489	0/0:14,0:15:26.43:0,26,919	0/0:42,0:42:99:0,102,5274	0/0:40,0:40:99:0,105,5381	0/0:36,0:36:77.88:0,78,4111	0/0:35,0:34:59.99:0,60,1824	0/0:36,0:35:47.63:0,48,1460	0/0:32,0:31:62.22:0,62,1855	0/0:28,0:28:71.89:0,72,2019	0/0:12,0:12:32.36:0,32,599	0/0:29,0:29:33.02:0,33,1006	0/0:88,0:87:89.06:0,89,3085	0/0:27,0:27:75.26:0,75,3500	0/0:18,0:18:39.13:0,39,1849	0/0:54,0:53:99:0,126,6380	0/0:21,0:21:45.15:0,45,2441	0/0:25,0:25:56.98:0,57,1617	0/0:19,0:19:41.70:0,42,1018	0/0:13,0:13:27.09:0,27,902
chr10	14024747	.	TCA	T	10627.13	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=16.584;DP=897;FS=11.266;HRun=0;HaplotypeScore=240.3785;InbreedingCoeff=0.9765;MQ=50.18;MQ0=6;MQRankSum=-5.482;QD=19.83;ReadPosRankSum=1.671;VQSLOD=3.4913;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,99,1690	1/1:4,7:11:21.03:253,21,0	0/0:53,0:19:47.65:0,48,771	0/0:33,0:12:24.08:0,24,404	1/1:8,16:24:39.13:513,39,0	1/1:28,0:28:11.46:61,11,0	1/1:33,0:31:5.51:26,6,0	1/1:15,12:22:33.07:415,33,0	1/1:9,35:44:90.25:1155,90,0	1/1:11,27:36:90.18:1181,90,0	1/1:4,12:16:30.08:373,30,0	0/0:41,0:41:99:0,102,1748	0/0:40,0:40:99:0,105,1778	0/0:35,0:35:77.95:0,78,1335	1/1:2,33:34:60.11:750,60,0	1/1:4,32:35:48.01:612,48,0	1/1:9,22:32:60.94:822,61,0	1/1:8,20:28:35.70:759,36,0	1/1:4,8:12:27.01:389,27,0	1/1:8,21:29:33.02:395,33,0	1/1:23,64:86:98.15:1270,98,0	0/0:27,0:27:75.26:0,75,1279	0/0:19,0:19:42.14:0,42,703	0/0:53,0:52:99:0,126,2148	0/0:20,0:20:48.16:0,48,816	1/1:10,15:25:57.19:748,57,0	1/1:4,14:18:42.14:551,42,0	1/1:1,12:13:27.09:355,27,0
chr10	14024869	.	CAT	C	5585.25	PASS	AB=0.719;AC=22;AF=0.393;AN=56;BaseQRankSum=9.602;DP=708;FS=16.405;HRun=0;HaplotypeScore=166.4281;InbreedingCoeff=-0.0190;MQ=42.21;MQ0=75;MQRankSum=-4.837;QD=14.78;ReadPosRankSum=-3.622;VQSLOD=2.5653;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:37:25.22:0,25,1615	0/1:2,9:10:1.53:224,0,2	0/0:45,0:3:6.91:0,7,106	0/0:48,0:5:9.03:0,9,181	0/1:8,10:17:51.71:57,0,52	0/0:18,0:18:45.15:0,45,866	0/0:32,1:32:66.61:0,67,1221	0/1:24,6:16:99:157,0,337	1/1:14,19:30:37.58:627,38,0	0/1:17,16:28:99:686,0,259	1/1:3,6:9:18.53:288,19,0	0/0:26,0:26:42.73:0,43,994	0/0:32,0:31:38.49:0,38,1356	0/1:20,0:18:15.96:16,0,487	1/1:15,9:22:21.48:384,21,0	0/1:10,9:15:56.50:186,0,57	0/1:11,8:18:99:197,0,139	0/1:8,8:12:38.43:393,0,38	0/1:11,11:16:99:455,0,155	0/1:9,9:18:40.47:230,0,40	0/1:39,7:42:44.99:241,0,45	0/0:20,0:19:11.63:0,12,644	0/1:10,1:10:18.20:18,0,484	0/0:48,0:46:83.50:0,84,1999	0/0:22,0:21:31.02:0,31,844	0/1:9,15:22:99:650,0,127	0/1:5,12:16:7.74:490,0,8	1/1:3,5:7:21:285,21,0
chr10	14024889	.	T	TACAC	1661.77	PASS	AB=0.986;AC=33;AF=0.635;AN=52;BaseQRankSum=0.700;DP=705;FS=6.254;HRun=0;HaplotypeScore=212.4750;InbreedingCoeff=0.1328;MQ=41.38;MQ0=64;MQRankSum=-2.140;QD=3.49;ReadPosRankSum=-3.073;VQSLOD=1.7470;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:37,2:40:6.09:403,6,0	1/1:6,0:6:2.05:22,2,0	./.	./.	1/1:19,0:20:11.64:155,12,0	0/1:13,0:15:15.50:15,0,18	0/1:25,0:27:22.16:29,0,22	1/1:22,0:11:5.94:41,6,0	1/1:29,2:29:14.18:189,14,0	1/1:37,0:32:32.29:241,32,0	0/1:10,0:10:0.03:0,0,0	0/1:28,0:29:9.54:10,0,157	0/0:34,0:33:10.31:0,10,247	0/0:26,0:25:3.72:0,4,150	0/1:26,2:26:12.93:129,0,13	1/1:24,0:20:5.89:51,6,0	1/1:20,0:22:11.92:90,12,0	0/1:14,0:11:26.71:32,0,27	0/1:19,0:16:51.40:63,0,51	1/1:23,0:22:3.83:47,4,0	0/0:56,0:51:4.92:0,5,10	0/0:26,0:25:20.59:0,21,146	0/1:16,0:16:32.88:33,0,185	0/1:44,0:43:48.85:49,0,198	0/0:18,0:18:13.52:0,14,134	1/1:21,0:20:6.13:27,6,0	1/1:15,0:15:5.66:76,6,0	1/1:10,0:9:11.93:123,12,0
chr10	14026651	.	GGACGTCAGAT	G	13546.12	PASS	AB=0.571;AC=24;AF=0.429;AN=56;BaseQRankSum=14.010;DP=527;FS=3.092;HRun=0;HaplotypeScore=198.3273;InbreedingCoeff=0.4081;MQ=81.15;MQ0=0;MQRankSum=-14.873;QD=56.44;ReadPosRankSum=-0.182;VQSLOD=4.5315;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,135,6964	0/1:2,4:6:36.93:345,0,37	0/0:22,0:22:55.70:0,56,2438	0/0:19,0:19:52.62:0,53,2447	1/1:4,12:16:30.53:614,31,0	0/0:25,0:25:69.24:0,69,3702	0/0:25,0:25:75.26:0,75,3864	1/1:4,23:27:69.24:2235,69,0	0/1:7,13:20:83.09:1147,0,83	0/1:2,11:14:26.11:981,0,26	1/1:3,7:10:18.06:370,18,0	0/0:21,0:21:63.22:0,63,3380	0/0:20,0:20:60.21:0,60,3158	0/0:23,0:23:69.24:0,69,3660	0/1:2,12:14:25.24:1067,0,25	0/1:4,14:18:4.29:1374,0,4	1/1:5,9:14:15.05:461,15,0	1/1:1,2:3:2.99:102,3,0	1/1:10,9:19:24.07:738,24,0	1/1:7,11:18:41.35:898,41,0	1/1:15,10:25:37.58:975,38,0	0/0:13,0:13:36.11:0,36,1738	0/0:15,0:15:42.14:0,42,2215	0/0:34,0:34:99:0,102,5468	0/0:25,0:25:69.23:0,69,3686	0/1:4,11:15:77.96:842,0,78	0/1:5,9:14:99:806,0,225	0/1:1,6:7:43.34:590,0,43
chr10	14026652	.	G	GGGTTT	3701.96	PASS	AB=0.891;AC=16;AF=0.286;AN=56;BaseQRankSum=8.024;DP=485;FS=0.000;HRun=0;HaplotypeScore=173.9619;InbreedingCoeff=-0.2802;MQ=84.52;MQ0=0;MQRankSum=-8.648;QD=18.79;ReadPosRankSum=-4.526;VQSLOD=2.5550;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,135,3076	0/1:4,2:6:65.56:199,0,66	0/0:21,0:21:59.40:0,59,1246	0/0:20,0:20:46.27:0,46,1127	1/1:12,1:13:1.92:483,2,0	0/0:26,0:26:69.22:0,69,1562	0/0:25,0:25:75.26:0,75,1703	0/1:23,0:23:47.10:47,0,469	0/1:13,5:18:99:421,0,244	0/1:12,1:14:49.91:50,0,260	0/1:8,0:8:10.90:250,0,11	0/0:21,0:21:63.22:0,63,1450	0/0:20,0:20:60.21:0,60,1377	0/0:23,0:23:69.24:0,69,1605	0/1:12,1:13:99:231,0,181	0/1:14,3:17:99:233,0,307	0/1:10,0:10:40.75:41,0,102	0/0:2,0:2:3:0,3,29	0/1:9,0:9:17.34:17,0,149	0/1:11,3:14:47.52:595,0,48	0/1:17,2:19:81.65:464,0,82	0/0:12,0:12:36.11:0,36,775	0/0:15,0:15:42.01:0,42,883	0/0:34,0:34:99:0,102,2282	0/0:24,0:24:69.24:0,69,1608	0/1:11,2:13:99:195,0,167	0/1:9,3:13:99:415,0,135	0/1:6,1:7:59.64:60,0,153
chr10	14026653	.	A	AGCAG	1050.06	PASS	AB=0.852;AC=10;AF=0.179;AN=56;BaseQRankSum=8.055;DP=482;FS=17.106;HRun=0;HaplotypeScore=172.7437;InbreedingCoeff=-0.2327;MQ=84.68;MQ0=0;MQRankSum=-5.534;QD=7.95;ReadPosRankSum=-0.119;VQSLOD=1.7886;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,135,2810	0/1:4,2:6:71.27:116,0,71	0/0:21,0:21:60.11:0,60,1121	0/0:19,0:20:16.77:0,17,1015	0/0:12,1:13:12.70:0,13,53	0/0:26,0:26:72.23:0,72,1452	0/0:25,0:25:75.24:0,75,1533	0/0:23,0:23:19.56:0,20,510	0/1:13,5:18:99:278,0,249	0/1:13,1:14:36.69:37,0,246	0/0:8,0:8:9.73:0,10,47	0/0:21,0:21:63.22:0,63,1321	0/0:20,0:20:60.21:0,60,1258	0/0:23,0:23:69.24:0,69,1439	0/1:12,1:13:31.29:31,0,214	0/1:14,3:17:99:150,0,313	0/0:10,0:10:13.26:0,13,115	0/0:2,0:2:2.99:0,3,28	0/0:9,0:9:16.88:0,17,166	0/1:11,3:14:80.07:108,0,80	0/1:14,2:16:99:103,0,124	0/0:11,0:11:33.11:0,33,692	0/0:16,0:16:42.14:0,42,861	0/0:34,0:34:99:0,102,2110	0/0:23,0:23:69.24:0,69,1447	0/1:11,2:13:99:114,0,165	0/1:10,3:13:99:210,0,137	0/1:7,1:8:46.42:46,0,147
chr10	14026656	.	T	TGGAGCCCCATCC	20426.73	PASS	AB=0.933;AC=17;AF=0.304;AN=56;BaseQRankSum=9.877;DP=616;FS=12.000;HRun=0;HaplotypeScore=324.7521;InbreedingCoeff=-0.2711;MQ=75.44;MQ0=0;MQRankSum=-13.920;QD=61.90;ReadPosRankSum=-2.884;VQSLOD=3.1760;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,135,4960	0/1:8,2:10:99:1009,0,171	0/0:18,0:18:54.05:0,54,1731	0/0:20,0:20:59.78:0,60,1812	1/1:20,1:21:14.74:562,15,0	0/0:26,0:26:75.26:0,75,2821	0/0:24,0:24:72.25:0,72,2792	0/1:35,0:35:99:1324,0,1220	0/1:29,5:34:99:3170,0,624	0/1:21,1:23:99:1404,0,520	0/1:11,0:11:59.23:145,0,59	0/0:21,0:21:63.22:0,63,2484	0/0:20,0:20:60.21:0,60,2315	0/0:25,0:25:69.24:0,69,2675	0/1:18,1:19:99:1037,0,537	0/1:20,3:23:99:1472,0,795	0/1:21,0:21:99:1326,0,228	0/1:7,0:7:54.49:461,0,54	0/1:20,0:20:99:1308,0,399	0/1:21,3:24:96.32:1358,0,96	0/1:20,2:22:99:1302,0,281	0/0:12,0:12:36.10:0,36,1261	0/0:16,0:16:45.15:0,45,1642	0/0:36,0:36:99:0,105,4017	0/0:23,0:23:69.24:0,69,2679	0/1:24,1:26:99:2115,0,444	0/1:18,3:22:99:2047,0,385	0/1:11,1:12:99:386,0,365
chr10	14027499	.	C	CAT	3589.57	PASS	AB=0.609;AC=23;AF=0.411;AN=56;BaseQRankSum=9.469;DP=655;FS=27.068;HRun=0;HaplotypeScore=88.6509;InbreedingCoeff=0.3420;MQ=59.34;MQ0=13;MQRankSum=4.105;QD=8.84;ReadPosRankSum=2.383;VQSLOD=1.6970;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:46.22:0,46,456	0/1:9,1:9:11.79:136,0,12	0/0:12,0:5:14.97:0,15,128	0/0:22,0:9:24.04:0,24,248	1/1:16,1:17:28.84:308,29,0	0/0:16,0:14:26.93:0,27,215	0/0:26,0:25:59.76:0,60,481	1/1:19,0:19:34.49:385,34,0	1/1:3,14:17:5.03:146,5,0	1/1:6,26:32:38.56:577,39,0	0/1:5,15:21:15.01:141,0,15	0/0:20,0:20:47.58:0,48,409	0/0:17,0:17:34.13:0,34,282	0/0:17,0:16:44.88:0,45,400	0/1:6,16:22:45.35:195,0,45	1/1:17,0:17:8.74:68,9,0	0/1:13,28:41:62.17:118,0,62	1/1:3,29:33:12.67:283,13,0	1/1:22,0:21:23.80:388,24,0	0/1:4,10:13:3.85:138,0,4	0/1:23,46:70:45.86:46,0,127	0/0:22,0:22:41.87:0,42,329	0/0:13,0:13:13.05:0,13,218	0/0:29,0:29:46.03:0,46,529	0/0:12,0:12:29.86:0,30,264	0/1:11,24:36:26.66:518,0,27	0/1:3,17:19:6.97:95,0,7	0/1:1,14:15:31.87:47,0,32
chr10	14027507	.	C	CAG	5108.92	PASS	AB=1.000;AC=30;AF=0.536;AN=56;BaseQRankSum=5.858;DP=625;FS=1.793;HRun=0;HaplotypeScore=92.9359;InbreedingCoeff=0.8742;MQ=64.54;MQ0=9;MQRankSum=1.469;QD=13.27;ReadPosRankSum=-3.629;VQSLOD=3.6688;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:56.35:0,56,528	1/1:12,0:11:16.63:181,17,0	0/0:14,0:7:20.87:0,21,167	0/0:25,0:12:27:0,27,252	1/1:16,0:16:38.94:344,39,0	0/0:14,0:14:26.91:0,27,221	0/0:25,0:24:65.70:0,66,535	1/1:19,0:19:51.02:466,51,0	1/1:20,0:20:18.02:235,18,0	1/1:29,0:29:76.96:687,77,0	1/1:19,0:19:12.02:180,12,0	0/0:18,0:18:41.08:0,41,361	0/0:14,0:14:35.91:0,36,311	0/0:16,0:15:41.89:0,42,376	1/1:17,0:17:12.39:257,12,0	1/1:3,16:20:6.02:96,6,0	0/1:36,0:36:0.89:182,0,1	1/1:33,0:33:21.64:387,22,0	1/1:28,0:27:77.92:679,78,0	1/1:15,0:15:9.49:203,9,0	1/1:54,1:55:17.09:206,17,0	0/0:18,0:18:32.95:0,33,271	0/0:18,0:18:21.91:0,22,286	0/0:23,0:23:36.09:0,36,459	0/0:12,0:12:29.97:0,30,271	1/1:34,0:34:86.94:799,87,0	1/1:17,0:17:12:157,12,0	0/1:15,0:15:2.52:49,0,3
chr10	14027924	.	C	CGTGTGTGTGT	9319.57	PASS	AB=0.732;AC=35;AF=0.625;AN=56;BaseQRankSum=-2.832;DP=793;FS=1.486;HRun=0;HaplotypeScore=217.1376;InbreedingCoeff=0.6528;MQ=63.14;MQ0=7;MQRankSum=-7.327;QD=17.99;ReadPosRankSum=-4.936;VQSLOD=3.0699;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:44:77.83:0,78,1897	1/1:9,3:21:6.02:300,6,0	0/0:36,0:21:2.99:0,3,24	0/1:32,0:25:19.11:19,0,70	1/1:10,3:21:2.94:150,3,0	0/1:3,0:17:36.97:37,0,74	0/1:16,0:35:30.07:30,0,166	1/1:9,0:21:38.37:875,38,0	1/1:8,12:28:24.08:1198,24,0	1/1:16,0:36:29.73:515,30,0	1/1:13,0:13:15:270,15,0	0/0:28,0:31:51.07:0,51,1417	0/0:23,0:28:62.57:0,63,1318	0/0:38,0:45:87.28:0,87,2354	1/1:8,8:26:20.97:967,21,0	1/1:15,14:38:30.24:1236,30,0	1/1:19,6:30:12.04:573,12,0	1/1:15,5:27:14.82:412,15,0	1/1:28,0:28:33.24:774,33,0	1/1:3,4:12:9.03:449,9,0	1/1:38,12:67:3.72:151,4,0	0/0:12,0:13:33.11:0,33,971	0/0:15,0:19:29.85:0,30,615	0/0:37,0:43:81.71:0,82,2036	0/0:12,0:16:28.91:0,29,682	1/1:20,7:38:32.68:670,33,0	1/1:12,0:22:15.05:424,15,0	1/1:4,0:4:6.02:271,6,0
chr10	14028803	.	CTCTCTGTG	C	5427.38	PASS	AC=30;AF=0.556;AN=54;BaseQRankSum=12.581;DP=571;FS=8.653;HRun=0;HaplotypeScore=160.9775;InbreedingCoeff=0.8414;MQ=69.57;MQ0=2;MQRankSum=-7.346;QD=22.43;ReadPosRankSum=-2.801;VQSLOD=3.4031;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:66.20:0,66,2274	1/1:3,4:7:6.02:152,6,0	0/0:29,0:25:0.54:0,1,261	0/0:30,0:21:12.04:0,12,367	1/1:6,9:15:3.95:78,4,0	0/0:23,0:23:45.15:0,45,1724	0/0:30,0:30:66.23:0,66,2168	1/1:17,3:18:9.03:203,9,0	1/1:3,13:16:15.05:379,15,0	1/1:11,13:24:36.10:752,36,0	1/1:2,9:11:3.48:77,3,0	0/0:24,0:24:48.16:0,48,1965	0/0:13,0:13:27.07:0,27,853	0/0:24,0:24:45.15:0,45,1840	1/1:4,13:17:18.06:418,18,0	1/1:7,11:18:23.77:609,24,0	1/1:10,13:23:18.06:438,18,0	1/1:9,11:20:15.05:343,15,0	1/1:6,9:14:27.09:619,27,0	1/1:3,9:12:3.01:76,3,0	./.	0/0:15,0:15:36.11:0,36,1249	0/0:10,0:10:27.09:0,27,1065	0/0:36,0:36:81.28:0,81,3181	0/0:23,0:23:42.24:0,42,1653	1/1:8,15:23:45.01:866,45,0	1/1:8,6:14:12.04:304,12,0	1/1:3,4:7:6.02:113,6,0
chr10	14029334	.	GT	G	1580.78	PASS	AB=0.966;AC=39;AF=0.722;AN=54;BaseQRankSum=4.571;DP=380;FS=6.201;HRun=17;HaplotypeScore=49.1210;InbreedingCoeff=0.5942;MQ=45.20;MQ0=59;MQRankSum=-3.442;QD=5.90;ReadPosRankSum=3.829;VQSLOD=2.3499;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:15:30.07:0,30,311	1/1:1,0:1:2.99:23,3,0	0/0:62,0:8:4.67:0,5,21	0/1:53,2:10:11.68:12,0,19	1/1:14,6:17:20.89:163,21,0	1/1:10,1:10:8.97:73,9,0	1/1:2,1:2:3.88:26,4,0	1/1:6,3:6:6.77:69,7,0	1/1:2,1:1:2.99:24,3,0	1/1:8,4:10:14.94:121,15,0	1/1:7,7:14:11.82:80,12,0	0/0:4,0:3:5.97:0,6,50	1/1:1,0:1:1.55:4,2,0	0/0:3,0:3:3.01:0,3,32	1/1:6,1:5:5.98:48,6,0	1/1:6,1:4:8.35:56,8,0	1/1:15,10:18:17.95:144,18,0	1/1:3,7:8:2.99:24,3,0	1/1:8,7:10:17.71:132,18,0	1/1:4,7:11:20.94:166,21,0	1/1:5,5:5:3:25,3,0	./.	0/0:5,0:5:12.02:0,12,122	0/0:7,0:5:5.14:0,5,36	0/0:10,0:10:20.99:0,21,208	1/1:6,10:12:26.77:207,27,0	1/1:10,10:20:20.67:166,21,0	1/1:4,12:13:23.37:190,23,0
chr10	14029444	.	C	CTT	5082.02	PASS	AB=0.917;AC=33;AF=0.589;AN=56;BaseQRankSum=-5.941;DP=295;FS=17.608;HRun=9;HaplotypeScore=37.7896;InbreedingCoeff=0.7810;MQ=63.71;MQ0=4;MQRankSum=-0.932;QD=25.16;ReadPosRankSum=-0.913;VQSLOD=2.2390;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:18:39.02:0,39,413	1/1:2,6:8:9.03:129,9,0	0/1:19,0:6:22:22,0,42	0/0:21,0:9:10.93:0,11,110	1/1:2,10:12:24.01:311,24,0	0/0:10,0:10:23.93:0,24,255	0/0:10,0:10:27.06:0,27,287	1/1:5,8:11:21.06:289,21,0	1/1:2,6:9:17.55:239,18,0	1/1:1,8:10:24.08:368,24,0	1/1:0,2:2:5.98:66,6,0	0/0:5,0:5:12.01:0,12,128	0/0:4,0:4:6.01:0,6,64	0/0:3,0:3:3:0,3,32	1/1:0,4:4:12.04:185,12,0	1/1:2,4:7:15.04:209,15,0	1/1:4,19:24:47.99:721,48,0	1/1:2,12:14:24.08:366,24,0	1/1:1,6:7:18.06:277,18,0	1/1:3,6:9:18.06:277,18,0	1/1:2,7:6:9.03:139,9,0	0/0:1,0:1:3.01:0,3,32	0/0:6,0:7:17.78:0,18,172	0/0:3,0:3:3:0,3,32	0/0:9,0:9:26.66:0,27,265	1/1:4,14:18:39.13:600,39,0	1/1:3,10:13:30.07:421,30,0	1/1:3,14:19:30.10:462,30,0
chr10	14029722	.	GTAGGTAGATAGATAGA	G	3757.51	PASS	AB=0.857;AC=21;AF=0.404;AN=52;BaseQRankSum=-1.509;DP=528;FS=1.984;HRun=0;HaplotypeScore=170.6888;InbreedingCoeff=0.4154;MQ=54.99;MQ0=21;MQRankSum=-3.320;QD=15.53;ReadPosRankSum=-1.058;VQSLOD=2.7535;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:34:93.05:0,93,1995	1/1:6,0:6:11.96:155,12,0	0/0:34,0:9:14.65:0,15,120	0/0:32,0:9:10.75:0,11,132	1/1:9,0:8:14.96:120,15,0	0/1:20,0:19:81.77:82,0,466	0/0:25,0:22:46.74:0,47,393	1/1:21,0:14:20.62:171,21,0	1/1:17,0:17:41.86:497,42,0	0/1:21,0:21:17.39:553,0,17	./.	0/0:25,0:25:63.98:0,64,2110	0/0:24,0:23:59.23:0,59,1355	0/0:24,0:24:66.04:0,66,2362	1/1:4,23:26:11.80:89,12,0	0/1:21,3:24:3.97:693,0,4	0/0:2,18:20:3.01:0,3,79	0/1:11,0:10:60.08:207,0,60	1/1:12,0:7:11.98:158,12,0	./.	1/1:20,0:19:23.87:308,24,0	0/0:10,0:10:27.01:0,27,533	0/0:8,0:8:20.82:0,21,586	0/0:21,0:21:51.09:0,51,1746	0/0:21,0:20:54.05:0,54,1763	0/1:19,0:18:91.18:503,0,91	0/1:2,23:25:99:148,0,136	0/1:3,7:10:73.78:74,0,91
chr10	14029783	.	TTGTGTGTGTGTGTGTGTGTGTGTG	T	490.82	PASS	AC=4;AF=0.077;AN=52;BaseQRankSum=1.317;DP=442;FS=3.938;HRun=0;HaplotypeScore=234.8427;InbreedingCoeff=0.5607;MQ=40.57;MQ0=28;MQRankSum=-0.901;QD=18.18;ReadPosRankSum=0.342;VQSLOD=2.5974;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:28:59.87:0,60,4043	0/0:2,0:2:3.01:0,3,54	./.	./.	0/0:5,0:9:9.37:0,9,386	1/1:7,8:15:8.99:400,9,0	1/1:7,5:11:2.54:189,3,0	0/0:29,0:24:48.16:0,48,3076	0/0:20,0:20:18.06:0,18,853	0/0:20,0:19:51.18:0,51,4036	0/0:4,0:2:3.01:0,3,328	0/0:14,0:13:21.07:0,21,1722	0/0:12,0:12:11.25:0,11,673	0/0:23,0:23:26.37:0,26,2038	0/0:25,0:27:12.92:0,13,979	0/0:20,0:23:27.09:0,27,2422	0/0:20,0:20:18.53:0,19,1249	0/0:11,0:9:24.08:0,24,1782	0/0:13,0:11:24.08:0,24,1861	0/0:2,0:2:3.01:0,3,314	0/0:22,0:22:12.98:0,13,1151	0/0:12,0:12:30.10:0,30,3047	0/0:4,0:3:6.02:0,6,366	0/0:21,0:22:42.14:0,42,3337	0/0:15,0:15:24.55:0,25,2197	0/0:21,0:19:57.20:0,57,4246	0/0:16,0:16:27.09:0,27,2396	0/0:14,0:14:18.06:0,18,1496
chr10	14030795	.	C	CT	388.40	PASS	AB=0.928;AC=34;AF=0.607;AN=56;BaseQRankSum=-0.648;DP=255;FS=2.548;HRun=15;HaplotypeScore=144.0358;InbreedingCoeff=0.2637;MQ=78.98;MQ0=12;MQRankSum=-1.751;QD=2.03;ReadPosRankSum=-1.409;VQSLOD=0.3993;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,9:16:8.90:67,9,0	1/1:5,0:5:2.70:8,3,0	0/0:21,1:15:5.60:0,6,47	0/1:11,0:7:0:0,0,0	0/0:6,0:5:0.47:0,0,1	0/1:13,2:16:37.19:37,0,84	0/0:8,0:8:5.02:0,5,35	1/1:17,0:10:0.69:10,1,0	0/1:9,0:9:1.33:3,0,1	1/1:4,0:3:0.94:2,1,0	1/1:8,0:7:0.47:1,0,0	1/1:4,2:6:5.99:50,6,0	1/1:4,5:9:12.42:96,12,0	1/1:3,2:5:5.99:49,6,0	0/0:10,0:10:8.04:0,8,29	0/0:5,0:5:2.44:0,2,10	1/1:6,0:6:5.30:16,5,0	1/1:8,0:8:4.03:16,4,0	0/0:6,0:6:6:0,6,25	0/1:5,0:5:0:0,0,0	0/1:10,0:10:0:0,0,0	0/0:7,0:7:2.44:0,2,17	1/1:6,1:7:3:25,3,0	0/1:7,3:8:17.53:39,0,18	0/1:9,4:13:33.04:74,0,33	1/1:12,0:11:8.35:22,8,0	0/1:9,0:9:3.53:7,0,4	1/1:2,0:2:0.89:2,1,0
chr10	14032580	.	C	CT	5997.95	PASS	AB=0.813;AC=33;AF=0.589;AN=56;BaseQRankSum=-11.343;DP=441;FS=2.454;HRun=10;HaplotypeScore=47.0057;InbreedingCoeff=0.6776;MQ=66.35;MQ0=0;MQRankSum=-1.380;QD=19.60;ReadPosRankSum=-1.669;VQSLOD=5.0141;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:37:88.87:0,89,717	0/1:3,5:8:9.61:113,0,10	0/0:10,0:9:11.84:0,12,89	0/1:9,0:7:3.96:4,0,40	1/1:2,17:20:26.32:469,26,0	0/0:4,0:20:30.54:0,31,88	0/0:2,0:12:6.83:0,7,42	0/1:11,21:32:2.22:568,0,2	1/1:1,11:12:27.07:288,27,0	1/1:5,11:17:29.23:341,29,0	1/1:1,10:11:30.55:321,31,0	0/1:12,1:13:8:8,0,148	0/0:9,0:10:29:0,29,227	0/0:13,0:12:23.92:0,24,194	1/1:4,10:14:27.07:288,27,0	1/1:0,13:13:36.09:384,36,0	1/1:5,30:37:70.33:800,70,0	1/1:5,18:23:45.11:480,45,0	1/1:4,12:16:36.09:384,36,0	1/1:2,9:11:27.07:288,27,0	1/1:1,6:8:20.88:203,21,0	0/0:7,0:7:8.97:0,9,74	0/0:11,0:11:26.95:0,27,221	0/1:10,1:11:3.66:4,0,148	0/0:13,0:13:34.19:0,34,271	1/1:3,22:25:57.14:608,57,0	1/1:3,17:20:36.09:384,36,0	1/1:1,3:4:6.02:64,6,0
chr10	14032769	.	CT	C	1369.60	PASS	AB=0.767;AC=23;AF=0.411;AN=56;BaseQRankSum=-1.086;DP=535;FS=7.752;HRun=16;HaplotypeScore=68.2490;InbreedingCoeff=0.2806;MQ=53.41;MQ0=24;MQRankSum=2.108;QD=4.08;ReadPosRankSum=0.766;VQSLOD=0.6956;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,1:37:31.38:0,31,416	0/1:3,7:10:16.49:27,0,16	0/0:19,0:6:6.70:0,7,37	0/0:14,0:1:2.88:0,3,15	0/1:24,4:29:36.32:113,0,36	0/0:7,0:16:20.90:0,21,126	0/0:11,0:13:11.45:0,11,64	0/1:20,4:16:5.79:35,0,6	1/1:7,1:8:8.69:53,9,0	1/1:9,7:16:5.02:35,5,0	0/1:16,3:19:47.41:47,0,49	0/0:14,0:14:20.30:0,20,194	0/0:10,0:10:15.79:0,16,115	0/0:9,0:8:8.99:0,9,76	1/1:8,2:10:16.50:95,16,0	0/1:10,7:15:21.22:84,0,21	1/1:26,21:48:7.99:303,8,0	0/1:15,12:27:6.95:86,0,7	0/1:23,3:22:42.41:64,0,42	1/1:14,3:17:11.86:127,12,0	1/1:12,5:13:24.05:133,24,0	0/0:13,0:14:20.32:0,20,147	0/0:14,1:15:14.71:0,15,207	0/0:18,1:19:37.61:0,38,320	0/0:15,1:17:12.69:0,13,192	0/1:20,14:34:11.70:137,0,12	1/1:8,5:14:7.13:135,7,0	0/1:11,3:14:4.80:82,0,5
chr10	14033073	.	GTC	G	19496.96	PASS	AB=0.529;AC=31;AF=0.554;AN=56;BaseQRankSum=19.236;DP=755;FS=11.773;HRun=0;HaplotypeScore=123.0089;InbreedingCoeff=0.9016;MQ=64.24;MQ0=3;MQRankSum=-2.643;QD=44.62;ReadPosRankSum=3.046;VQSLOD=5.2482;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:63,0:63:99:0,190,3749	0/1:1,8:9:36.88:302,0,37	0/0:19,0:12:32.98:0,33,488	0/0:21,0:16:33.56:0,34,619	1/1:0,28:28:75.26:1223,75,0	0/0:25,0:25:75.26:0,75,1513	0/0:24,0:24:72.25:0,72,1463	1/1:0,25:25:75.24:1190,75,0	1/1:0,22:22:66.22:1067,66,0	1/1:0,27:27:81.25:1289,81,0	1/1:0,22:22:51.17:832,51,0	0/0:22,0:22:66.23:0,66,1341	0/0:22,0:22:66.23:0,66,1339	0/0:25,0:25:75.26:0,75,1513	1/1:0,32:31:90.31:1466,90,0	1/1:0,28:28:84.29:1370,84,0	1/1:1,20:21:2.41:918,2,0	1/1:1,42:43:50.56:1700,51,0	1/1:0,23:21:57.17:903,57,0	1/1:0,17:17:51.17:831,51,0	1/1:0,73:73:99:3229,199,0	0/0:21,0:21:57.20:0,57,1152	0/0:19,0:19:57.20:0,57,1146	0/0:37,0:37:99:0,111,2253	0/0:20,0:20:60.21:0,60,1219	1/1:0,29:29:87.30:1416,87,0	1/1:0,26:26:72.25:1173,72,0	1/1:0,12:12:36.12:587,36,0
chr10	14033526	.	T	TAC	1468.11	PASS	AB=0.943;AC=19;AF=0.365;AN=52;BaseQRankSum=-3.704;DP=641;FS=1.567;HRun=0;HaplotypeScore=111.6002;InbreedingCoeff=0.1038;MQ=69.54;MQ0=16;MQRankSum=0.562;QD=4.80;ReadPosRankSum=-0.518;VQSLOD=2.9067;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:37,1:36:2.46:254,0,2	0/0:6,0:6:3.01:0,3,30	./.	./.	0/0:14,0:13:9.02:0,9,97	0/0:17,0:20:8.85:0,9,50	0/0:24,0:33:2:0,2,33	1/1:25,0:24:7.56:39,8,0	0/1:19,1:20:49.11:49,0,75	0/1:28,0:27:29.30:29,0,109	0/0:10,0:11:8.13:0,8,54	0/1:10,5:14:7.18:239,0,7	0/1:18,0:18:51.50:52,0,59	0/0:18,0:19:8.65:0,9,59	0/0:27,0:27:16.20:0,16,131	0/0:18,0:20:29.61:0,30,268	0/0:35,0:40:46.94:0,47,407	0/0:15,0:17:24.55:0,25,212	0/0:16,0:15:6.01:0,6,58	0/1:14,1:15:27.36:27,0,89	0/0:41,1:39:12.97:0,13,276	0/1:20,0:20:46.41:100,0,46	1/1:11,3:15:6.02:88,6,0	0/1:50,4:54:94.67:322,0,95	1/1:17,1:19:0.87:119,1,0	1/1:17,0:15:7.27:91,7,0	0/1:14,0:15:24.74:93,0,25	1/1:3,2:5:9.03:127,9,0
chr10	14034699	.	GT	G	1032.18	PASS	AB=0.840;AC=17;AF=0.304;AN=56;BaseQRankSum=-9.494;DP=531;FS=0.448;HRun=15;HaplotypeScore=112.7569;InbreedingCoeff=0.4089;MQ=65.18;MQ0=9;MQRankSum=0.297;QD=4.73;ReadPosRankSum=0.461;VQSLOD=2.2481;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,23:30:15.71:336,16,0	0/0:7,0:7:11.36:0,11,59	0/1:37,0:13:6.21:6,0,52	0/1:26,0:11:3.89:4,0,20	0/0:18,0:19:44.84:0,45,249	0/1:10,0:10:4.26:4,0,40	0/1:11,0:9:1.81:2,0,41	0/0:31,0:31:32.38:0,32,258	0/0:19,0:19:21.03:0,21,144	0/0:32,0:30:23.92:0,24,266	0/0:20,0:20:18.73:0,19,214	1/1:11,5:18:26.65:197,27,0	1/1:7,0:7:10.88:63,11,0	1/1:8,3:11:2.18:125,2,0	0/0:16,0:16:17.40:0,17,100	0/0:11,0:10:19.82:0,20,100	0/0:15,0:15:13.67:0,14,73	0/0:21,0:21:21.09:0,21,173	0/0:19,0:19:10.76:0,11,114	0/0:25,0:24:10.93:0,11,193	0/0:17,0:16:18.16:0,18,95	1/1:3,8:11:16.94:103,17,0	0/1:5,13:19:22.25:107,0,22	0/1:4,7:11:39.79:40,0,61	0/1:14,11:25:50.23:219,0,50	0/0:28,0:27:50.83:0,51,252	0/0:22,0:22:36.32:0,36,229	0/0:10,0:11:22.05:0,22,103
chr10	14034707	.	T	TG	2165.64	PASS	AB=0.970;AC=21;AF=0.375;AN=56;BaseQRankSum=-0.826;DP=534;FS=20.990;HRun=0;HaplotypeScore=118.8589;InbreedingCoeff=0.1372;MQ=59.97;MQ0=13;MQRankSum=4.279;QD=6.24;ReadPosRankSum=1.713;VQSLOD=2.0967;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:74.38:0,74,601	1/1:7,0:7:15.12:109,15,0	0/1:35,0:11:4.02:4,0,143	0/0:24,0:9:8.10:0,8,121	0/1:20,2:22:38.44:123,0,38	0/0:18,0:17:30.51:0,31,268	0/0:12,0:10:25.35:0,25,196	0/1:30,1:30:20.53:207,0,21	0/1:18,0:17:41.93:54,0,42	0/1:34,0:32:76.68:277,0,77	0/1:21,0:20:49.92:119,0,50	0/0:18,0:18:50.87:0,51,425	0/0:7,0:5:14.93:0,15,114	0/0:12,0:12:35.95:0,36,315	0/1:17,0:17:5.43:106,0,5	0/1:11,0:10:2.95:52,0,3	0/1:9,1:10:1.13:94,0,1	0/1:18,2:20:64.44:150,0,64	0/1:17,1:18:54.46:172,0,54	1/1:27,0:26:24.12:282,24,0	0/1:14,0:13:1.12:65,0,1	0/0:12,0:12:29.54:0,30,220	0/0:19,0:19:26.93:0,27,255	0/0:13,0:12:24:0,24,245	0/0:24,0:24:71.84:0,72,643	1/1:29,2:29:11.49:312,11,0	0/1:20,1:21:99:131,0,118	1/1:10,0:10:19.42:86,19,0
chr10	14034714	.	TG	T	4613.49	PASS	AB=0.926;AC=43;AF=0.768;AN=56;BaseQRankSum=9.756;DP=522;FS=17.098;HRun=1;HaplotypeScore=107.1770;InbreedingCoeff=0.3231;MQ=56.60;MQ0=13;MQRankSum=-0.541;QD=10.14;ReadPosRankSum=0.811;VQSLOD=1.4871;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:26,1:27:12.25:12,0,75	1/1:3,0:3:8.14:46,8,0	0/0:25,3:8:1.76:0,2,39	0/1:17,3:8:17.72:39,0,18	1/1:23,0:23:25.16:244,25,0	1/1:18,0:17:40.40:265,40,0	1/1:9,2:9:20.21:150,20,0	1/1:30,2:31:66.59:426,67,0	1/1:18,0:17:27.83:170,28,0	1/1:31,3:32:71.47:589,71,0	1/1:19,3:21:8.67:181,9,0	0/1:18,0:18:1.85:2,0,91	0/1:8,1:7:15.43:15,0,42	0/1:12,2:14:81.32:111,0,81	1/1:16,1:17:23.70:211,24,0	1/1:10,1:10:22.18:140,22,0	1/1:10,0:10:19.36:109,19,0	1/1:19,1:20:47.69:307,48,0	1/1:14,1:15:19.82:216,20,0	1/1:23,3:25:58.95:422,59,0	1/1:13,0:12:10.29:119,10,0	0/1:12,2:14:1.61:2,0,49	0/1:19,0:19:12.82:13,0,86	0/0:16,0:15:10.68:0,11,157	0/0:22,1:23:9.52:0,10,206	1/1:31,0:29:38.75:439,39,0	1/1:20,0:20:45.93:254,46,0	1/1:10,0:10:23.01:134,23,0
chr10	14034739	.	TTTTG	T	3144.40	PASS	AB=1.000;AC=37;AF=0.661;AN=56;BaseQRankSum=9.564;DP=450;FS=22.758;HRun=0;HaplotypeScore=114.1904;InbreedingCoeff=0.7996;MQ=56.89;MQ0=6;MQRankSum=-4.939;QD=10.24;ReadPosRankSum=-2.977;VQSLOD=0.9875;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:27:55.18:0,55,1065	1/1:6,0:6:12.60:70,13,0	0/0:9,0:3:5.60:0,6,44	0/1:9,0:6:10.49:10,0,51	1/1:18,0:18:5.31:136,5,0	1/1:18,0:18:33.26:419,33,0	1/1:8,0:8:13.06:115,13,0	1/1:27,2:28:47.95:409,48,0	1/1:22,0:21:17.05:73,17,0	1/1:22,0:21:50.06:403,50,0	1/1:20,1:20:16.29:240,16,0	0/0:13,0:13:30.52:0,31,467	0/0:9,0:8:10.87:0,11,271	0/0:18,0:18:54.03:0,54,721	1/1:11,0:11:8.34:60,8,0	1/1:11,0:10:17.66:99,18,0	1/1:8,0:8:5.12:29,5,0	1/1:21,0:21:34.90:218,35,0	1/1:20,1:21:39.38:289,39,0	1/1:25,0:23:36.30:250,36,0	1/1:9,0:9:3.22:8,3,0	0/0:14,0:14:36.58:0,37,545	0/0:13,0:13:36.08:0,36,468	0/0:16,0:15:39.12:0,39,669	0/0:23,0:23:66.17:0,66,1080	1/1:27,0:25:30.85:359,31,0	1/1:15,0:15:7.81:122,8,0	1/1:6,0:6:5.93:40,6,0
chr10	14034740	.	TTTG	T	5456.21	PASS	AB=0.756;AC=35;AF=0.625;AN=56;BaseQRankSum=9.241;DP=454;FS=14.784;HRun=0;HaplotypeScore=100.6453;InbreedingCoeff=0.7485;MQ=58.09;MQ0=6;MQRankSum=-4.499;QD=17.60;ReadPosRankSum=-3.011;VQSLOD=3.1227;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:60.81:0,61,909	1/1:5,1:6:17.94:187,18,0	0/1:10,0:3:0.85:1,0,43	0/0:10,0:7:0.84:0,1,56	0/1:7,11:18:1.42:318,0,1	1/1:15,3:18:39.31:376,39,0	1/1:7,1:8:16.11:121,16,0	1/1:10,18:27:58.77:536,59,0	1/1:19,3:21:21.67:194,22,0	1/1:16,6:21:53.47:597,53,0	1/1:9,12:20:1.56:264,2,0	0/0:13,0:13:30.42:0,30,472	0/0:9,0:8:14.74:0,15,287	0/0:18,0:18:53.95:0,54,753	0/1:5,6:11:3.40:129,0,3	1/1:11,1:11:31.03:225,31,0	1/1:0,8:8:5.92:83,6,0	1/1:15,5:20:50.83:576,51,0	1/1:19,3:22:35.50:427,36,0	1/1:17,7:22:47.65:434,48,0	1/1:1,8:9:7.85:47,8,0	0/0:15,0:15:39.51:0,40,568	0/0:13,0:13:33.71:0,34,484	0/0:16,0:15:39.10:0,39,641	0/0:23,0:23:65.99:0,66,939	1/1:20,7:25:20.17:632,20,0	1/1:14,1:15:27.61:214,28,0	1/1:9,0:9:6.02:96,6,0
chr10	14034741	.	TTG	T	4950.38	PASS	AB=0.909;AC=33;AF=0.589;AN=56;BaseQRankSum=9.667;DP=444;FS=11.251;HRun=0;HaplotypeScore=92.3493;InbreedingCoeff=0.7219;MQ=58.21;MQ0=6;MQRankSum=-4.727;QD=16.90;ReadPosRankSum=-3.011;VQSLOD=3.4129;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:58.42:0,58,746	1/1:6,1:7:21:202,21,0	0/0:10,0:3:3.31:0,3,47	0/0:10,0:7:5.14:0,5,52	0/1:15,3:18:11.04:269,0,11	1/1:16,2:18:41.81:357,42,0	1/1:8,0:8:18.81:126,19,0	1/1:25,2:26:54.26:485,54,0	1/1:7,13:19:21.86:234,22,0	1/1:21,1:21:54.86:521,55,0	0/1:20,1:20:3.56:256,0,4	0/0:11,0:11:30.14:0,30,403	0/0:9,0:8:17.33:0,17,229	0/0:18,0:18:52.85:0,53,661	0/1:10,1:11:12.47:124,0,12	1/1:12,0:11:32.85:275,33,0	1/1:8,0:8:5.80:45,6,0	1/1:20,0:20:50.46:436,50,0	1/1:22,0:22:26.83:349,27,0	1/1:22,0:20:49.08:400,49,0	1/1:8,1:9:8.43:52,8,0	0/0:15,0:15:36.02:0,36,472	0/0:13,0:13:38.04:0,38,458	0/0:16,0:15:39.11:0,39,540	0/0:23,0:23:65.50:0,65,754	1/1:25,1:24:13.73:497,14,0	1/1:12,2:14:23.29:259,23,0	1/1:7,1:8:6.01:62,6,0
chr10	14034742	.	TG	T	4569.06	PASS	AB=0.958;AC=34;AF=0.607;AN=56;BaseQRankSum=10.364;DP=436;FS=5.790;HRun=1;HaplotypeScore=86.2006;InbreedingCoeff=0.7658;MQ=58.65;MQ0=6;MQRankSum=-2.508;QD=15.98;ReadPosRankSum=-3.006;VQSLOD=3.8411;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:60.43:0,60,576	1/1:7,0:7:20.96:176,21,0	0/0:9,0:3:5.05:0,5,43	0/0:9,0:7:3.12:0,3,36	1/1:17,1:18:11.39:241,11,0	1/1:17,1:18:41.79:330,42,0	1/1:6,2:8:20.67:148,21,0	1/1:26,1:26:51.78:448,52,0	1/1:16,3:18:23.91:196,24,0	1/1:20,0:19:53.87:464,54,0	0/1:21,0:20:5.90:253,0,6	0/0:11,0:11:13.35:0,13,293	0/0:9,0:8:19.62:0,20,170	0/0:18,0:18:37.91:0,38,477	0/1:10,1:11:19.38:95,0,19	1/1:11,1:11:32.82:255,33,0	1/1:8,0:8:5.27:34,5,0	1/1:18,1:19:46.43:365,46,0	1/1:22,0:22:24.70:374,25,0	1/1:22,0:20:50.88:388,51,0	1/1:9,0:9:8.82:56,9,0	0/0:15,0:15:34.51:0,35,346	0/0:13,0:13:36.83:0,37,352	0/0:16,0:15:39.03:0,39,409	0/0:24,0:24:60.31:0,60,611	1/1:25,0:24:11.78:469,12,0	1/1:12,0:12:21.79:226,22,0	1/1:1,7:8:5.75:50,6,0
chr10	14034743	.	G	GTTT	1386.94	PASS	AB=1.000;AC=32;AF=0.571;AN=56;BaseQRankSum=5.453;DP=438;FS=1.865;HRun=10;HaplotypeScore=115.9841;InbreedingCoeff=0.5065;MQ=61.05;MQ0=5;MQRankSum=-5.331;QD=4.61;ReadPosRankSum=-3.219;VQSLOD=-0.7353;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:23.48:0,23,285	1/1:7,0:7:10.49:70,10,0	0/0:10,0:4:5.13:0,5,43	0/1:10,0:8:11.71:12,0,31	1/1:18,0:18:12.87:82,13,0	1/1:18,0:18:19.81:235,20,0	1/1:8,0:8:10.53:82,11,0	1/1:27,0:26:21.44:211,21,0	0/1:19,0:18:1.81:24,0,2	0/1:22,0:21:17.52:94,0,18	1/1:20,1:20:10.48:89,10,0	0/0:11,0:11:23.94:0,24,292	0/0:6,0:7:10.37:0,10,142	0/0:16,0:17:31.33:0,31,397	1/1:12,0:12:9.82:43,10,0	1/1:12,0:11:12.57:61,13,0	1/1:8,0:8:5.82:30,6,0	1/1:17,0:19:4.16:96,4,0	0/1:23,0:23:3.74:145,0,4	1/1:18,4:20:21.05:118,21,0	1/1:9,0:9:3.47:11,3,0	0/0:15,0:15:26.67:0,27,299	0/0:13,0:13:27.03:0,27,314	0/0:16,0:15:33.04:0,33,398	0/0:21,0:22:19.05:0,19,235	1/1:26,0:25:2.63:145,3,0	0/1:12,0:12:8.05:18,0,8	0/1:8,0:8:5.96:15,0,6
chr10	14034919	.	T	TTATC	1132.15	PASS	AB=0.764;AC=3;AF=0.060;AN=50;BaseQRankSum=-5.913;DP=523;FS=4.533;HRun=0;HaplotypeScore=84.7963;InbreedingCoeff=-0.0783;MQ=65.09;MQ0=4;MQRankSum=0.095;QD=15.95;ReadPosRankSum=-0.551;VQSLOD=2.8001;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:44:57.19:0,57,861	./.	./.	./.	0/0:12,0:12:18.05:0,18,254	0/0:23,0:23:33.11:0,33,507	0/0:15,0:15:9.03:0,9,137	0/0:44,0:44:2.93:0,3,21	0/0:19,0:19:33.11:0,33,506	0/0:19,0:19:33.11:0,33,501	0/0:14,0:15:21.06:0,21,304	0/0:16,0:16:18.06:0,18,264	0/0:16,0:16:27.09:0,27,414	0/0:19,0:19:24.08:0,24,362	0/0:25,0:25:42.14:0,42,644	0/0:21,0:21:27.08:0,27,389	0/1:13,15:29:49.91:751,0,50	0/0:7,0:7:12.04:0,12,173	0/0:22,0:22:24.08:0,24,367	0/0:17,0:17:30.09:0,30,439	0/0:13,0:13:12.04:0,12,184	0/0:11,0:11:9.02:0,9,112	0/0:23,0:23:33.11:0,33,506	0/1:9,9:19:64.99:463,0,65	0/0:14,0:14:24.08:0,24,368	0/1:22,0:21:13.90:14,0,407	0/0:23,0:22:27.08:0,27,388	0/0:11,0:11:12.04:0,12,184
chr10	14035303	.	T	TA	1943.05	PASS	AB=0.758;AC=28;AF=0.500;AN=56;BaseQRankSum=10.132;DP=230;FS=23.522;HRun=1;HaplotypeScore=41.7165;InbreedingCoeff=0.4592;MQ=68.28;MQ0=1;MQRankSum=-1.094;QD=13.40;ReadPosRankSum=5.477;VQSLOD=0.7165;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:68.95:0,69,822	1/1:1,2:3:9:79,9,0	0/1:7,0:7:13.72:14,0,104	0/0:8,0:4:8.82:0,9,83	1/1:2,2:4:2.61:50,3,0	0/0:20,0:20:60.18:0,60,813	0/0:7,0:7:21.02:0,21,235	0/1:15,15:30:14.42:361,0,14	0/1:5,3:8:8.51:92,0,9	1/1:4,2:6:8.26:102,8,0	1/1:1,3:4:4.02:66,4,0	0/0:5,0:5:15.05:0,15,192	0/0:5,0:5:9.03:0,9,120	0/0:4,0:4:12.04:0,12,162	1/1:2,3:5:4.48:66,4,0	1/1:0,1:1:3:27,3,0	1/1:10,11:21:0.44:243,0,0	1/1:3,10:13:17.90:259,18,0	1/1:5,7:12:36.03:333,36,0	1/1:2,1:3:3:27,3,0	0/0:1,0:1:2.37:0,2,8	0/0:1,0:1:3.01:0,3,36	0/0:1,0:1:3.01:0,3,36	0/0:3,0:3:9.03:0,9,120	0/0:6,0:6:18.05:0,18,224	0/1:3,4:7:0.28:98,0,0	1/1:2,2:4:0.24:44,0,0	1/1:7,10:17:18.62:261,19,0
chr10	14035304	.	T	TA	1543.88	PASS	AB=0.706;AC=23;AF=0.411;AN=56;BaseQRankSum=9.272;DP=232;FS=13.951;HRun=0;HaplotypeScore=43.8352;InbreedingCoeff=0.2856;MQ=68.05;MQ0=1;MQRankSum=-2.108;QD=10.50;ReadPosRankSum=4.425;VQSLOD=2.1133;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:69.03:0,69,865	1/1:1,2:3:6.88:52,7,0	0/1:7,0:7:2.39:2,0,146	0/0:8,0:4:8.70:0,9,89	0/1:2,2:4:3.61:41,0,4	0/0:20,0:20:57.19:0,57,796	0/0:7,0:7:21.04:0,21,245	0/1:17,14:31:76.41:305,0,76	0/1:5,3:8:3.15:109,0,3	0/1:4,2:6:4.88:74,0,5	0/1:1,3:4:1.57:56,0,2	0/0:5,0:5:15.05:0,15,210	0/0:6,0:6:12.03:0,12,151	0/0:4,0:4:12.04:0,12,167	1/1:3,3:6:1.98:79,2,0	1/1:0,1:1:3:25,3,0	0/1:10,11:21:55.98:194,0,56	1/1:3,10:13:3.73:202,4,0	1/1:5,7:12:25.07:197,25,0	1/1:2,1:3:2.99:25,3,0	0/0:1,0:1:2.84:0,3,14	0/0:1,0:1:3.01:0,3,42	0/0:1,0:1:3.01:0,3,42	0/0:3,0:3:9.03:0,9,126	0/0:5,0:5:15.05:0,15,210	1/1:3,4:7:6.26:122,6,0	0/1:2,2:4:5.42:39,0,5	0/1:7,9:17:1.20:188,0,1
chr10	14035623	.	AT	A	427.82	PASS	AB=0.923;AC=5;AF=0.089;AN=56;BaseQRankSum=5.914;DP=417;FS=0.778;HRun=10;HaplotypeScore=43.2562;InbreedingCoeff=0.7475;MQ=70.09;MQ0=0;MQRankSum=-1.265;QD=12.58;ReadPosRankSum=1.184;VQSLOD=2.7272;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:82.58:0,83,881	0/0:5,0:5:15.04:0,15,166	0/1:11,1:12:2.50:2,0,166	0/0:8,0:8:15.04:0,15,166	0/0:16,0:16:48.13:0,48,530	1/1:1,14:15:41.99:365,42,0	1/1:0,7:7:21:182,21,0	0/0:32,0:32:72.19:0,72,795	0/0:13,0:13:36.08:0,36,388	0/0:20,0:20:45.12:0,45,498	0/0:21,0:21:51.13:0,51,556	0/0:16,0:16:36.09:0,36,390	0/0:13,0:13:33.09:0,33,365	0/0:12,0:12:36.06:0,36,378	0/0:12,0:12:21.06:0,21,232	0/0:15,0:15:42.11:0,42,465	0/0:26,0:27:75.04:0,75,810	0/0:16,0:16:30.08:0,30,332	0/0:18,0:18:40.35:0,40,434	0/0:5,0:5:9.02:0,9,92	0/0:3,0:3:6:0,6,57	0/0:4,0:4:12.03:0,12,132	0/0:13,1:14:10.04:0,10,338	0/0:11,0:11:30.07:0,30,323	0/0:12,0:12:33.09:0,33,365	0/0:20,0:20:48.12:0,48,522	0/0:17,0:17:45.08:0,45,483	0/0:16,1:17:25.12:0,25,505
chr10	14038727	.	C	CCAAAAAA	3423.20	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-4.639;DP=690;FS=8.551;HRun=0;HaplotypeScore=151.4761;InbreedingCoeff=0.9981;MQ=77.64;MQ0=0;MQRankSum=-9.337;QD=62.24;ReadPosRankSum=0.298;VQSLOD=3.4723;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:45:99:0,120,2624	0/0:11,0:11:27.09:0,27,640	0/0:22,0:21:53.43:0,53,981	0/0:36,0:36:79.62:0,80,1570	0/0:21,0:21:44.93:0,45,1002	1/1:5,19:24:33.11:1248,33,0	1/1:13,16:31:60.20:2175,60,0	0/0:34,0:34:65.74:0,66,1231	0/0:29,0:29:63.16:0,63,1308	0/0:28,0:28:66.20:0,66,1397	0/0:17,0:17:39.13:0,39,924	0/0:18,0:18:48.12:0,48,1086	0/0:12,0:12:24.08:0,24,565	0/0:15,0:15:36.12:0,36,827	0/0:21,0:21:54.16:0,54,1186	0/0:26,0:26:63.19:0,63,1399	0/0:30,0:30:81.20:0,81,1696	0/0:17,0:17:42.14:0,42,995	0/0:36,0:36:84.26:0,84,1753	0/0:16,0:16:36.06:0,36,710	0/0:34,0:34:84.25:0,84,1934	0/0:28,0:28:66.15:0,66,1352	0/0:19,0:19:51.18:0,51,1207	0/0:27,0:27:69.24:0,69,1601	0/0:21,0:21:39.13:0,39,923	0/0:27,0:27:72.23:0,72,1613	0/0:28,0:27:75.24:0,75,1728	0/0:16,0:16:45.15:0,45,1060
chr10	14039301	.	AT	A	1892.09	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.594;DP=659;FS=5.410;HRun=1;HaplotypeScore=63.2908;InbreedingCoeff=0.9976;MQ=63.39;MQ0=0;MQRankSum=0.597;QD=35.04;ReadPosRankSum=1.897;VQSLOD=3.5760;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,108,1718	0/0:10,0:10:30.07:0,30,450	0/0:28,0:23:64.44:0,64,940	0/0:24,0:22:61.91:0,62,910	0/0:26,0:26:78.23:0,78,1197	1/1:0,27:27:69.23:965,69,0	1/1:0,27:27:75.25:1049,75,0	0/0:30,0:30:90.30:0,90,1417	0/0:27,0:27:78.24:0,78,1200	0/0:27,0:27:81.21:0,81,1263	0/0:17,0:17:48.15:0,48,745	0/0:23,0:23:69.22:0,69,1079	0/0:18,0:18:54.17:0,54,840	0/0:28,0:28:84.27:0,84,1317	0/0:24,0:24:72.23:0,72,1128	0/0:22,0:22:66.23:0,66,1053	0/0:23,0:23:69.24:0,69,1100	0/0:21,0:21:60.20:0,60,955	0/0:16,0:16:45.14:0,45,694	0/0:30,0:30:90.28:0,90,1382	0/0:19,0:19:54.18:0,54,856	0/0:29,0:29:84.26:0,84,1298	0/0:17,0:17:51.17:0,51,813	0/0:28,0:28:84.25:0,84,1293	0/0:24,0:24:72.25:0,72,1151	0/0:21,0:21:63.21:0,63,986	0/0:27,0:27:81.28:0,81,1289	0/0:7,0:7:21.07:0,21,336
chr10	14040041	.	C	CAAAAAAAA	626.20	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=1.195;DP=544;FS=7.309;HRun=11;HaplotypeScore=141.1252;InbreedingCoeff=0.7319;MQ=49.20;MQ0=14;MQRankSum=-4.716;QD=17.89;ReadPosRankSum=-3.476;VQSLOD=-0.3633;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:57:78.77:0,79,1671	0/0:10,0:9:14.62:0,15,315	0/0:7,0:2:3.01:0,3,64	0/0:16,0:12:8.47:0,8,267	0/0:18,0:19:35.67:0,36,719	1/1:17,0:18:21.07:441,21,0	1/1:10,5:16:12.51:300,13,0	0/0:33,0:33:49.43:0,49,991	0/0:21,0:21:29:0,29,592	0/0:20,0:20:29.32:0,29,560	0/0:9,0:9:14.71:0,15,316	0/0:19,0:18:26.44:0,26,530	0/0:9,0:9:8.50:0,9,187	0/0:14,0:14:29.71:0,30,605	0/0:20,0:20:32.43:0,32,695	0/0:16,0:16:23.33:0,23,506	0/0:23,0:23:32.28:0,32,598	0/0:23,0:22:53.90:0,54,1063	0/0:23,0:23:35.31:0,35,702	0/0:26,0:26:42.46:0,42,849	0/0:15,0:14:29.85:0,30,634	0/0:12,0:12:23.81:0,24,496	0/0:15,0:15:26.05:0,26,535	0/0:18,0:17:23.72:0,24,495	0/0:12,0:11:17.57:0,18,343	0/0:26,0:27:38.58:0,39,986	0/0:27,0:27:34.68:0,35,653	0/0:10,0:9:0.03:0,0,376
chr10	14040584	.	ACCT	A	1806.09	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.993;DP=525;FS=6.363;HRun=0;HaplotypeScore=75.7843;InbreedingCoeff=0.9689;MQ=78.05;MQ0=0;MQRankSum=-1.299;QD=40.14;ReadPosRankSum=0.692;VQSLOD=4.2428;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:90.31:0,90,2037	0/0:14,0:14:39.12:0,39,855	0/0:23,0:21:42.58:0,43,829	0/0:26,0:20:46.66:0,47,985	0/0:19,0:19:54.15:0,54,1125	1/1:1,21:22:48.16:802,48,0	1/1:0,23:23:66.23:1126,66,0	0/0:24,0:24:69.22:0,69,1502	0/0:11,0:11:33.11:0,33,755	0/0:21,0:21:54.19:0,54,1217	0/0:10,0:10:30.10:0,30,691	0/0:18,0:18:54.19:0,54,1238	0/0:8,0:8:24.08:0,24,534	0/0:9,0:9:27.09:0,27,622	0/0:23,0:23:69.24:0,69,1572	0/0:17,0:17:51.18:0,51,1175	0/0:26,0:25:78.25:0,78,1723	0/0:4,0:4:9.03:0,9,208	0/0:23,0:23:63.17:0,63,1306	0/0:22,0:22:57.19:0,57,1242	0/0:25,0:25:75.26:0,75,1706	0/0:16,0:16:45.15:0,45,1014	0/0:17,0:17:51.17:0,51,1147	0/0:14,0:14:39.13:0,39,896	0/0:21,0:21:63.22:0,63,1411	0/0:20,0:20:57.20:0,57,1315	0/0:20,0:20:54.18:0,54,1244	0/0:16,0:16:48.16:0,48,1106
chr10	14041080	.	C	CT	438.35	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-5.485;DP=501;FS=11.923;HRun=10;HaplotypeScore=73.6076;InbreedingCoeff=0.9073;MQ=78.18;MQ0=0;MQRankSum=0.724;QD=16.24;ReadPosRankSum=0.455;VQSLOD=3.1414;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:92.84:0,93,758	0/0:4,0:4:11.98:0,12,98	0/0:15,0:13:11.54:0,12,159	0/0:19,0:18:16.29:0,16,144	0/0:22,0:22:56.92:0,57,467	1/1:1,9:10:24.06:256,24,0	1/1:7,10:17:8.44:295,8,0	0/0:32,0:32:68.26:0,68,546	0/0:19,0:19:38.95:0,39,320	0/0:20,0:20:47.94:0,48,393	0/0:6,0:6:11.93:0,12,98	0/0:22,0:22:53.89:0,54,437	0/0:21,0:22:61.92:0,62,490	0/0:15,0:15:44.92:0,45,364	0/0:13,0:13:38.33:0,38,303	0/0:19,0:19:44.90:0,45,368	0/0:26,0:26:43.54:0,44,438	0/0:14,0:14:38.95:0,39,320	0/0:24,0:24:53.50:0,54,407	0/0:13,0:13:35.95:0,36,294	0/0:14,0:14:32.94:0,33,268	0/0:13,0:13:26.96:0,27,222	0/0:12,0:12:29.93:0,30,242	0/0:21,0:21:53.92:0,54,443	0/0:10,0:10:26.96:0,27,222	0/0:19,0:19:38.83:0,39,319	0/0:29,0:28:74.89:0,75,614	0/0:9,0:9:20.98:0,21,172
chr10	14041285	.	A	AAAGG	12455.68	PASS	AB=0.926;AC=33;AF=0.589;AN=56;BaseQRankSum=-12.072;DP=583;FS=8.343;HRun=0;HaplotypeScore=85.2190;InbreedingCoeff=0.7700;MQ=59.21;MQ0=7;MQRankSum=0.135;QD=32.78;ReadPosRankSum=-0.696;VQSLOD=4.1866;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:21:9.72:0,10,564	1/1:0,12:12:23.82:512,24,0	0/0:31,0:11:22.25:0,22,278	0/0:24,0:16:30.02:0,30,360	1/1:3,20:23:44.81:763,45,0	0/1:26,0:26:39.09:39,0,372	0/1:24,0:24:55.63:56,0,315	1/1:6,21:28:63.04:907,63,0	1/1:1,20:22:42.14:1047,42,0	1/1:4,11:15:33.10:743,33,0	1/1:1,18:19:44.82:886,45,0	0/0:19,0:19:51.07:0,51,761	0/0:15,0:15:36.10:0,36,558	0/0:20,0:20:48.12:0,48,733	1/1:0,16:18:36.12:898,36,0	1/1:2,16:19:30.10:749,30,0	1/1:21,6:25:36.09:683,36,0	1/1:2,18:20:33.11:823,33,0	1/1:5,16:20:44.25:520,44,0	1/1:3,17:21:44.95:863,45,0	0/1:10,4:14:24:350,0,24	0/0:11,0:11:24.06:0,24,360	0/0:18,0:18:48.13:0,48,714	0/0:26,0:26:54.10:0,54,890	0/0:17,0:17:42.10:0,42,596	1/1:5,14:19:38.15:990,38,0	1/1:3,34:37:51.50:1207,52,0	1/1:11,3:14:27.03:420,27,0
chr10	14041341	.	GAAGA	G	2896.70	PASS	AB=0.884;AC=26;AF=0.520;AN=50;BaseQRankSum=-1.968;DP=513;FS=0.000;HRun=0;HaplotypeScore=97.6794;InbreedingCoeff=0.5576;MQ=54.20;MQ0=8;MQRankSum=3.617;QD=10.09;ReadPosRankSum=-0.181;VQSLOD=2.3993;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:47.92:0,48,455	1/1:6,1:7:3.01:46,3,0	./.	./.	0/1:20,4:24:35.20:402,0,35	0/0:19,0:19:30.09:0,30,631	0/0:15,0:15:12.02:0,12,187	./.	1/1:16,2:18:18.05:253,18,0	1/1:17,2:17:24.03:321,24,0	1/1:10,1:11:6.02:91,6,0	0/0:20,0:20:26.99:0,27,355	0/0:13,0:13:5.46:0,5,74	0/0:12,0:19:3.01:0,3,37	1/1:14,2:16:12.04:180,12,0	1/1:16,3:19:17.24:250,17,0	0/1:11,10:19:34.40:168,0,34	1/1:12,3:15:21.04:292,21,0	1/1:25,0:18:4.25:29,4,0	0/1:20,0:20:1.91:62,0,2	0/1:12,0:12:16.98:18,0,17	0/0:13,0:13:18.02:0,18,241	0/0:13,0:12:6.02:0,6,139	0/0:27,0:27:44.64:0,45,900	0/0:24,0:24:33.06:0,33,402	1/1:15,5:20:32.45:441,32,0	1/1:33,9:42:29.20:436,29,0	1/1:10,8:17:6.02:91,6,0
chr10	14045447	.	AAAGAAAGAGAAACAAAG	A	1511.04	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.830;DP=538;FS=0.000;HRun=0;HaplotypeScore=243.4238;InbreedingCoeff=0.9679;MQ=73.01;MQ0=0;MQRankSum=-5.682;QD=125.92;ReadPosRankSum=1.068;VQSLOD=3.3251;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,114,9076	0/0:11,0:11:33.11:0,33,2691	0/0:22,0:18:48.64:0,49,2323	0/0:33,0:33:73.58:0,74,4858	0/0:27,0:27:75.26:0,75,5513	1/1:0,8:8:24.08:1182,24,0	1/1:1,3:4:9.03:443,9,0	0/0:16,0:16:45.15:0,45,3218	0/0:19,0:19:48.16:0,48,3915	0/0:24,0:24:72.21:0,72,5193	0/0:21,0:21:60.21:0,60,4517	0/0:21,0:21:63.22:0,63,4407	0/0:17,0:17:51.18:0,51,4160	0/0:17,0:17:51.17:0,51,3991	0/0:13,0:13:39.13:0,39,2875	0/0:18,0:18:54.16:0,54,3555	0/0:22,0:22:66.23:0,66,5103	0/0:15,0:15:42.14:0,42,3300	0/0:24,0:24:72.25:0,72,5255	0/0:14,0:14:39.13:0,39,3223	0/0:24,0:24:69.24:0,69,5165	0/0:19,0:19:57.20:0,57,4613	0/0:17,0:17:51.15:0,51,3335	0/0:22,0:22:63.22:0,63,4694	0/0:14,0:14:42.14:0,42,3255	0/0:18,0:18:54.18:0,54,4040	0/0:21,0:21:63.22:0,63,4658	0/0:18,0:18:54.19:0,54,4243
chr10	14046490	.	A	AGTGTGCAT	7316.06	PASS	AB=0.546;AC=26;AF=0.500;AN=52;BaseQRankSum=-6.512;DP=673;FS=9.420;HRun=0;HaplotypeScore=179.7799;InbreedingCoeff=0.8791;MQ=57.09;MQ0=7;MQRankSum=-8.131;QD=23.75;ReadPosRankSum=-2.209;VQSLOD=3.4927;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:69.18:0,69,1600	1/1:14,1:15:12:220,12,0	0/0:39,0:24:17.13:0,17,316	0/0:37,0:18:17.25:0,17,241	0/1:4,24:28:0:0,0,0	0/0:22,0:22:45.07:0,45,897	0/0:20,0:19:35.50:0,36,655	1/1:25,0:25:32.91:460,33,0	1/1:5,16:21:9.03:318,9,0	1/1:6,16:23:41.98:1186,42,0	0/1:5,19:26:0:0,0,0	0/0:21,0:21:48.04:0,48,881	0/0:20,0:20:42.11:0,42,966	0/0:22,0:22:35.86:0,36,871	1/1:6,19:26:3.01:125,3,0	1/1:6,18:27:6.02:237,6,0	1/1:8,9:17:21.05:747,21,0	1/1:11,4:15:18.02:622,18,0	1/1:7,11:21:41.98:921,42,0	./.	./.	0/0:29,0:29:62.18:0,62,1349	0/0:24,0:24:39:0,39,930	0/0:31,0:31:63.12:0,63,1403	0/0:14,0:14:30.09:0,30,718	1/1:8,16:26:48.07:1357,48,0	1/1:4,26:30:18.06:748,18,0	1/1:1,7:8:9.03:374,9,0
chr10	14046534	.	CGTGT	C	1511.12	PASS	AB=0.830;AC=30;AF=0.652;AN=46;BaseQRankSum=-3.301;DP=665;FS=0.000;HRun=0;HaplotypeScore=156.5990;InbreedingCoeff=0.2874;MQ=45.51;MQ0=24;MQRankSum=-0.137;QD=3.98;ReadPosRankSum=-1.299;VQSLOD=2.4709;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:37,3:44:64:64,0,270	1/1:8,4:13:3.01:47,3,0	./.	./.	1/1:21,2:23:5.91:93,6,0	1/1:11,0:17:2.78:28,3,0	./.	0/0:22,0:21:2.68:0,3,11	1/1:22,2:24:5.95:92,6,0	1/1:24,4:27:12.04:178,12,0	1/1:18,4:23:5.64:89,6,0	0/0:14,0:17:11.03:0,11,50	0/0:18,0:18:1.84:0,2,10	0/0:17,1:19:2.74:0,3,12	1/1:18,2:20:6.01:75,6,0	1/1:17,4:21:11.63:150,12,0	1/1:16,5:21:17.68:260,18,0	1/1:8,0:10:1:24,1,0	./.	./.	1/1:35,3:37:7.79:207,8,0	0/0:19,0:28:19.13:0,19,144	0/0:17,0:18:0:0,0,0	0/1:21,2:33:23.60:24,0,188	0/1:13,1:16:1.27:1,0,28	0/1:15,1:16:20.24:95,0,20	1/1:19,2:21:8.57:133,9,0	1/1:7,2:8:6.49:94,6,0
chr10	14047950	.	AGAGT	A	297.78	PASS	AB=0.733;AC=1;AF=0.018;AN=56;BaseQRankSum=6.248;DP=1021;FS=2.183;HRun=0;HaplotypeScore=186.1986;InbreedingCoeff=-0.0183;MQ=57.92;MQ0=19;MQRankSum=-2.486;QD=13.54;ReadPosRankSum=-3.873;VQSLOD=2.9557;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:42:99:0,109,2906	0/0:14,0:14:42.13:0,42,1100	0/0:43,0:27:64.37:0,64,1360	0/0:69,0:45:34.45:0,34,1511	0/0:26,0:25:69.24:0,69,1904	0/1:14,8:22:99:372,0,530	0/0:43,0:40:99:0,105,2422	0/0:33,0:21:60.18:0,60,1449	0/0:40,0:40:99:0,105,2703	0/0:42,0:42:99:0,126,3227	0/0:18,0:18:51.18:0,51,1392	0/0:48,0:48:99:0,129,3356	0/0:38,0:38:93.28:0,93,2372	0/0:33,0:33:84.25:0,84,2169	0/0:37,0:37:99:0,108,2725	0/0:25,0:25:69.07:0,69,1822	0/0:52,0:52:99:0,150,3830	0/0:34,0:34:99:0,102,2705	0/0:27,0:21:60.20:0,60,1546	0/0:21,0:21:57.18:0,57,1480	0/0:134,0:133:99:0,377,10166	0/0:29,0:27:78.25:0,78,2028	0/0:17,0:17:48.11:0,48,1184	0/0:47,0:47:99:0,126,3194	0/0:30,0:30:82.10:0,82,2260	0/0:27,0:27:81.26:0,81,2141	0/0:20,0:20:54.13:0,54,1430	0/0:8,0:8:24.08:0,24,671
chr10	14049799	.	GT	G	1429.33	PASS	AB=0.713;AC=24;AF=0.429;AN=56;BaseQRankSum=-0.699;DP=439;FS=0.000;HRun=16;HaplotypeScore=54.3358;InbreedingCoeff=0.1518;MQ=75.88;MQ0=4;MQRankSum=1.329;QD=5.27;ReadPosRankSum=3.558;VQSLOD=1.8147;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,1:31:39.94:0,40,382	1/1:1,3:4:5.71:36,6,0	0/0:20,0:11:3:0,3,25	0/0:16,1:15:9.86:0,10,64	0/1:8,12:21:70.85:104,0,71	0/0:12,0:20:20.34:0,20,130	0/0:6,0:11:20.19:0,20,114	0/1:18,9:28:43.85:121,0,44	1/1:4,9:13:19.61:114,20,0	1/1:8,5:11:11.57:71,12,0	0/1:14,4:18:26.10:64,0,26	0/1:9,3:12:16.24:16,0,77	0/0:13,0:14:6.23:0,6,141	0/0:7,0:9:12.79:0,13,110	0/1:11,9:20:39.57:111,0,40	0/1:3,6:10:15.85:84,0,16	0/1:17,15:32:23.63:296,0,24	1/1:8,8:17:17.07:149,17,0	1/1:6,12:19:24.46:139,24,0	0/1:1,7:8:10.62:57,0,11	1/1:9,5:16:3.38:98,3,0	0/0:6,0:7:10.12:0,10,64	0/0:15,0:15:35.70:0,36,271	0/0:13,0:16:23.63:0,24,173	0/0:6,0:7:2.15:0,2,42	0/1:11,2:14:11.64:42,0,12	0/1:12,4:18:20.72:56,0,21	1/1:5,3:8:8.66:54,9,0
chr10	14050883	.	CA	C	824.41	PASS	AB=0.919;AC=17;AF=0.304;AN=56;BaseQRankSum=5.547;DP=368;FS=3.664;HRun=1;HaplotypeScore=58.9806;InbreedingCoeff=-0.0680;MQ=65.36;MQ0=0;MQRankSum=0.628;QD=4.10;ReadPosRankSum=7.021;VQSLOD=0.4930;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,1:29:35.83:0,36,603	0/1:2,1:3:11.07:34,0,11	0/0:17,0:12:29.98:0,30,310	0/0:23,0:15:19.07:0,19,203	0/1:12,0:12:10.52:109,0,11	0/0:14,0:14:33.08:0,33,151	0/0:9,0:9:23.63:0,24,130	0/0:13,0:13:14.64:0,15,134	0/1:15,0:15:11.92:63,0,12	0/1:8,1:9:23.87:51,0,24	0/1:9,3:12:34.72:104,0,35	0/0:12,0:12:35.87:0,36,333	0/0:5,0:5:14.92:0,15,130	0/0:8,0:8:17.76:0,18,171	0/1:15,2:17:15.78:113,0,16	0/1:14,0:14:26.44:26,0,62	0/1:23,1:24:39.71:110,0,40	0/1:21,0:21:7.35:79,0,7	0/1:12,1:11:24.56:25,0,126	0/1:8,0:8:10.20:10,0,19	1/1:20,1:21:3.76:82,4,0	0/0:7,0:7:21.03:0,21,225	0/0:5,0:5:12.04:0,12,156	0/0:21,0:21:52.92:0,53,554	0/0:4,0:4:11.97:0,12,114	0/1:10,2:12:3.51:95,0,4	1/1:13,1:14:3.08:76,3,0	0/1:5,1:6:6.54:7,0,7
chr10	14050884	.	AC	A	4089.66	PASS	AB=0.733;AC=36;AF=0.643;AN=56;BaseQRankSum=1.354;DP=365;FS=6.534;HRun=10;HaplotypeScore=50.1768;InbreedingCoeff=0.8054;MQ=65.35;MQ0=0;MQRankSum=-0.751;QD=15.61;ReadPosRankSum=2.037;VQSLOD=3.8174;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:25,2:27:29.81:30,0,361	1/1:1,2:3:5.98:49,6,0	0/0:17,0:12:20.55:0,21,170	0/0:23,0:15:14.18:0,14,111	1/1:3,9:12:26.99:234,27,0	1/1:4,0:14:18.33:54,18,0	1/1:5,0:9:8.14:24,8,0	1/1:5,8:13:17.97:156,18,0	0/1:2,13:15:0.19:227,0,0	1/1:4,6:10:20.99:182,21,0	1/1:5,6:11:26.99:233,27,0	0/0:12,0:12:27.07:0,27,299	0/0:5,0:5:6.02:0,6,66	0/0:8,0:8:15.03:0,15,159	1/1:3,12:16:44.02:370,44,0	1/1:4,10:14:26.99:234,27,0	1/1:3,20:23:34.27:492,34,0	1/1:4,17:21:50.99:443,51,0	1/1:7,4:10:14.99:129,15,0	1/1:3,5:9:17.03:136,17,0	1/1:3,18:21:47.99:416,48,0	0/0:8,0:8:18.04:0,18,192	0/0:5,0:5:12.03:0,12,132	0/0:21,0:21:45.11:0,45,489	0/0:4,0:4:9.02:0,9,100	1/1:3,9:12:32.98:283,33,0	1/1:3,11:14:35.97:312,36,0	1/1:1,4:6:11.04:84,11,0
chr10	14051355	.	T	TTTC	668.10	PASS	AB=0.692;AC=3;AF=0.054;AN=56;BaseQRankSum=6.428;DP=488;FS=8.721;HRun=0;HaplotypeScore=72.8545;InbreedingCoeff=0.5441;MQ=51.39;MQ0=26;MQRankSum=-1.356;QD=19.65;ReadPosRankSum=0.316;VQSLOD=2.6973;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:38:94.02:0,94,1517	0/0:8,0:8:23.74:0,24,344	0/0:9,0:5:15.01:0,15,167	0/0:10,0:5:3.48:0,3,50	0/0:20,0:18:35.93:0,36,576	1/1:10,6:16:17.08:549,17,0	0/1:10,8:15:13.67:222,0,14	0/0:25,0:24:58.88:0,59,983	0/0:9,0:9:21.07:0,21,346	0/0:16,0:16:38.44:0,38,751	0/0:19,0:16:35.95:0,36,553	0/0:16,0:16:47.95:0,48,777	0/0:12,0:12:30.07:0,30,479	0/0:12,0:9:15.05:0,15,256	0/0:18,0:17:48.15:0,48,768	0/0:13,0:13:36.12:0,36,589	0/0:63,0:62:99:0,157,2617	0/0:24,0:19:39.13:0,39,661	0/0:18,0:17:51.17:0,51,841	0/0:9,0:8:21.07:0,21,358	0/0:10,0:8:14.81:0,15,254	0/0:3,0:3:9.03:0,9,151	0/0:8,0:8:24.08:0,24,409	0/0:24,0:22:54.17:0,54,863	0/0:14,0:12:29.92:0,30,432	0/0:21,0:20:54.17:0,54,864	0/0:12,0:11:24.08:0,24,401	0/0:21,0:17:45.61:0,46,740
chr10	14051358	.	TTC	T	149.90	PASS	AB=0.895;AC=3;AF=0.054;AN=56;BaseQRankSum=8.072;DP=486;FS=16.793;HRun=0;HaplotypeScore=57.3275;InbreedingCoeff=0.5717;MQ=50.78;MQ0=26;MQRankSum=-2.270;QD=4.54;ReadPosRankSum=-0.173;VQSLOD=0.7971;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:37:74.63:0,75,1389	0/0:7,0:7:7.34:0,7,278	0/0:8,0:4:2.18:0,2,88	0/0:10,0:5:0.08:0,0,10	0/0:20,0:18:32.14:0,32,515	1/1:14,2:16:33.20:187,33,0	0/1:15,2:14:2.12:68,0,2	0/0:25,0:24:65.79:0,66,928	0/0:9,0:9:24.01:0,24,358	0/0:18,0:18:52.61:0,53,727	0/0:17,0:14:29.32:0,29,422	0/0:16,0:16:45.14:0,45,697	0/0:12,0:12:32.63:0,33,417	0/0:11,0:8:20.92:0,21,232	0/0:19,0:18:48.05:0,48,664	0/0:13,0:13:33.07:0,33,488	0/0:65,0:64:99:0,164,2412	0/0:22,0:17:42.01:0,42,601	0/0:17,0:16:48.13:0,48,693	0/0:10,0:9:23.98:0,24,320	0/0:10,0:8:12.04:0,12,237	0/0:4,0:4:9.01:0,9,144	0/0:8,0:8:24.08:0,24,390	0/0:25,0:23:51.12:0,51,767	0/0:15,0:13:17.55:0,18,349	0/0:19,0:18:54.07:0,54,774	0/0:13,0:12:29.95:0,30,398	0/0:21,0:17:41.74:0,42,607
chr10	14051439	.	AC	A	495.22	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=5.937;DP=353;FS=0.000;HRun=6;HaplotypeScore=36.9636;InbreedingCoeff=0.7023;MQ=69.94;MQ0=13;MQRankSum=-0.566;QD=13.03;ReadPosRankSum=1.044;VQSLOD=1.4421;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:38.50:0,38,505	0/0:2,0:2:6:0,6,63	0/1:10,0:9:9.18:9,0,176	0/0:14,0:13:24.11:0,24,388	0/0:5,0:5:12.01:0,12,129	1/1:1,14:15:27.07:290,27,0	1/1:2,11:11:30.08:322,30,0	0/0:11,0:11:33.07:0,33,391	0/0:12,0:12:36.10:0,36,458	0/0:14,0:14:36.12:0,36,473	0/0:8,0:8:24.08:0,24,313	0/0:13,0:12:36.12:0,36,474	0/0:10,0:10:27.09:0,27,355	0/0:8,0:6:15.01:0,15,178	0/0:9,0:8:21.06:0,21,264	0/0:9,0:9:20.90:0,21,276	0/0:31,0:30:60.18:0,60,771	0/0:21,0:18:48.11:0,48,612	0/0:13,0:12:36.05:0,36,409	0/0:9,0:8:21.06:0,21,262	0/0:19,0:18:39.04:0,39,488	0/0:6,0:6:15.04:0,15,185	0/0:7,0:7:18.06:0,18,236	0/0:20,0:19:45.09:0,45,558	0/0:3,0:2:6.02:0,6,79	0/0:13,0:13:36.07:0,36,454	0/0:21,0:21:57.17:0,57,735	0/0:16,0:12:36.10:0,36,459
chr10	14052294	.	TCAC	T	305.57	PASS	AB=0.967;AC=7;AF=0.159;AN=44;BaseQRankSum=4.387;DP=256;FS=2.959;HRun=0;HaplotypeScore=40.6540;InbreedingCoeff=0.2854;MQ=53.90;MQ0=4;MQRankSum=-0.389;QD=3.97;ReadPosRankSum=-2.019;VQSLOD=1.1893;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:15:15.04:0,15,262	./.	0/0:11,0:3:0.47:0,0,1	0/0:14,0:3:1.82:0,2,6	0/0:6,0:6:6.02:0,6,118	1/1:10,3:13:2.84:41,3,0	1/1:26,8:35:25.71:332,26,0	./.	0/1:8,1:9:19.96:20,0,321	0/0:4,0:4:6.02:0,6,113	0/0:7,0:7:12.04:0,12,207	0/0:7,0:7:6.02:0,6,118	./.	0/1:10,0:10:22.72:23,0,109	0/0:3,0:3:9.03:0,9,177	./.	0/0:14,0:14:30.02:0,30,512	0/1:10,0:10:9.84:10,0,265	0/0:9,0:9:11.92:0,12,160	./.	0/0:22,0:22:27.53:0,28,492	0/0:6,0:6:12.04:0,12,235	0/0:2,0:2:3.01:0,3,59	0/0:19,0:19:33.11:0,33,622	0/0:3,0:3:9.03:0,9,166	0/0:14,0:14:27.09:0,27,526	0/0:6,0:6:12.04:0,12,236	./.
chr10	14052366	.	CT	C	477.31	PASS	AB=0.920;AC=5;AF=0.089;AN=56;BaseQRankSum=4.500;DP=379;FS=3.721;HRun=11;HaplotypeScore=45.9638;InbreedingCoeff=0.7095;MQ=70.75;MQ0=2;MQRankSum=-0.392;QD=7.96;ReadPosRankSum=1.745;VQSLOD=1.5777;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:49.37:0,49,514	0/0:7,0:7:21.05:0,21,224	0/0:22,0:17:8.62:0,9,148	0/0:11,0:7:21.03:0,21,210	0/0:9,0:9:24.05:0,24,249	1/1:3,12:16:34.99:277,35,0	1/1:5,16:21:38.93:320,39,0	0/0:11,1:12:8.43:0,8,286	0/0:11,0:11:33.08:0,33,352	0/0:18,0:18:42.11:0,42,447	0/0:7,0:7:9.02:0,9,96	0/0:7,0:7:16.85:0,17,165	0/0:10,0:10:30.06:0,30,313	0/0:11,0:11:24.06:0,24,256	0/0:11,0:11:33.08:0,33,352	0/0:4,0:4:12.03:0,12,128	0/0:30,0:30:69.17:0,69,729	0/0:23,0:23:63.12:0,63,659	0/0:16,0:17:44.84:0,45,440	0/0:12,0:12:27.53:0,28,283	0/1:21,2:23:4.19:4,0,363	0/0:7,0:7:18.05:0,18,192	0/0:6,0:6:18.05:0,18,192	0/0:16,0:16:42.09:0,42,441	0/0:13,0:13:33.06:0,33,342	0/0:19,0:19:42.11:0,42,448	0/0:11,0:11:27.07:0,27,286	0/0:2,0:2:6.02:0,6,64
chr10	14052684	.	A	AAAAC	1268.60	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-6.071;DP=586;FS=6.005;HRun=0;HaplotypeScore=87.5243;InbreedingCoeff=0.9850;MQ=63.53;MQ0=1;MQRankSum=0.066;QD=30.20;ReadPosRankSum=1.269;VQSLOD=2.7289;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:78.20:0,78,1221	0/0:8,0:8:24.08:0,24,396	0/0:37,0:23:39.12:0,39,592	0/0:37,0:25:37.61:0,38,556	0/0:22,0:22:50.20:0,50,799	1/1:4,16:20:30.10:731,30,0	1/1:4,17:21:27.09:658,27,0	0/0:25,0:25:45.13:0,45,678	0/0:12,0:12:30.10:0,30,492	0/0:26,0:26:51.17:0,51,820	0/0:13,0:13:39.09:0,39,615	0/0:22,0:22:48.16:0,48,790	0/0:11,0:11:24.08:0,24,396	0/0:10,0:10:30.10:0,30,494	0/0:14,0:14:33.10:0,33,519	0/0:17,0:17:24.06:0,24,349	0/0:39,0:39:93.28:0,93,1464	0/0:22,0:22:51.14:0,51,803	0/0:25,0:24:42.05:0,42,591	0/0:18,0:18:51.17:0,51,842	0/0:21,0:21:48.16:0,48,793	0/0:13,0:13:36.12:0,36,595	0/0:13,0:13:33.08:0,33,471	0/0:30,0:30:78.22:0,78,1250	0/0:12,0:12:15.04:0,15,224	0/0:21,0:21:57.18:0,57,916	0/0:31,0:31:72.17:0,72,1044	0/0:9,0:9:21.07:0,21,347
chr10	14053732	.	AC	A	936.43	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.466;DP=596;FS=2.137;HRun=1;HaplotypeScore=61.1385;InbreedingCoeff=0.9985;MQ=81.82;MQ0=0;MQRankSum=-2.517;QD=21.78;ReadPosRankSum=1.413;VQSLOD=3.8507;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,114,1663	0/0:8,0:8:24.05:0,24,350	0/0:18,0:18:39.03:0,39,615	0/0:15,0:15:30.63:0,31,335	0/0:15,0:15:45:0,45,577	1/1:0,17:17:48.10:484,48,0	1/1:3,23:26:57.11:574,57,0	0/0:18,0:18:45.08:0,45,603	0/0:21,0:21:60.19:0,60,925	0/0:26,0:26:72.21:0,72,1056	0/0:16,0:16:48.15:0,48,738	0/0:26,0:26:75.21:0,75,1106	0/0:15,0:15:45.07:0,45,649	0/0:28,0:28:84.14:0,84,1195	0/0:22,0:22:63.11:0,63,921	0/0:18,0:18:54.11:0,54,780	0/0:36,0:36:99:0,105,1576	0/0:30,0:30:84.24:0,84,1298	0/0:20,0:20:55.64:0,56,802	0/0:20,0:19:60.14:0,60,899	0/0:42,0:42:99:0,126,1910	0/0:15,0:15:42.12:0,42,642	0/0:12,0:12:36.08:0,36,543	0/0:22,0:22:66.09:0,66,936	0/0:14,0:14:42.09:0,42,610	0/0:20,0:20:60.17:0,60,882	0/0:22,0:21:66.08:0,66,930	0/0:16,0:16:48.16:0,48,756
chr10	14055314	.	CAGAG	C	1576.27	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.426;DP=834;FS=0.632;HRun=0;HaplotypeScore=146.6822;InbreedingCoeff=0.9979;MQ=72.16;MQ0=2;MQRankSum=-2.732;QD=28.66;ReadPosRankSum=-0.666;VQSLOD=3.2899;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:57:99:0,159,3805	0/0:8,0:8:21.04:0,21,440	0/0:42,0:35:86.27:0,86,1617	0/0:34,0:25:53.01:0,53,959	0/0:28,0:28:81.22:0,81,1871	1/1:0,28:28:66.18:1030,66,0	1/1:4,23:27:45.02:668,45,0	0/0:44,0:44:99:0,117,2498	0/0:28,0:28:75.19:0,75,1690	0/0:39,0:39:93.28:0,93,2042	0/0:28,0:28:81.25:0,81,1960	0/0:27,0:27:81.22:0,81,1790	0/0:23,0:23:66.21:0,66,1623	0/0:19,0:19:51.15:0,51,1230	0/0:28,0:28:54.07:0,54,1935	0/0:24,0:24:60.18:0,60,1400	0/0:23,0:23:69.20:0,69,1711	0/0:34,0:34:84.29:0,84,2161	0/0:32,0:30:81.24:0,81,1851	0/0:20,0:20:51.15:0,51,1228	0/0:44,0:44:99:0,113,2427	0/0:29,0:29:78.24:0,78,1937	0/0:18,0:18:47.89:0,48,1015	0/0:40,0:40:99:0,111,2653	0/0:19,0:19:54.16:0,54,1310	0/0:40,0:40:99:0,114,2550	0/0:24,0:24:64.06:0,64,1414	0/0:27,0:27:78.20:0,78,1771
chr10	14055406	.	G	GAC	734.77	PASS	AB=0.912;AC=15;AF=0.268;AN=56;BaseQRankSum=8.456;DP=654;FS=0.000;HRun=0;HaplotypeScore=127.9663;InbreedingCoeff=-0.2718;MQ=47.52;MQ0=34;MQRankSum=-1.771;QD=2.03;ReadPosRankSum=-2.396;VQSLOD=2.0677;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:81.09:0,81,1054	0/1:16,3:17:99:143,0,132	0/0:17,0:3:3.01:0,3,37	0/1:24,0:5:10.17:10,0,36	0/1:12,3:15:27.64:28,0,171	0/0:18,0:16:0.49:0,0,12	1/1:25,0:23:2.79:7,3,0	0/1:42,0:30:2.48:2,0,564	0/1:29,1:27:99:101,0,201	0/1:27,1:25:62.58:63,0,285	0/0:8,0:8:9.02:0,9,97	0/0:15,0:14:29.88:0,30,403	0/0:17,0:17:15.85:0,16,455	0/0:20,0:20:24.05:0,24,548	0/1:23,2:22:87.85:88,0,220	0/1:30,0:28:25.70:26,0,459	0/1:20,18:35:99:140,0,164	0/0:21,1:20:2.30:0,2,42	0/1:17,5:17:82.23:82,0,263	0/0:14,0:13:11.72:0,12,105	0/0:33,4:35:14.41:0,14,528	0/0:20,0:19:48.13:0,48,636	0/0:19,0:17:35.37:0,35,439	0/0:33,0:33:74.97:0,75,1028	0/0:15,0:15:33.01:0,33,431	0/1:40,1:38:99:152,0,444	0/1:13,1:13:19.21:19,0,125	0/1:7,1:9:22.47:22,0,171
chr10	14055408	.	CAG	C	716.41	PASS	AB=1.000;AC=16;AF=0.286;AN=56;BaseQRankSum=8.486;DP=644;FS=5.443;HRun=0;HaplotypeScore=116.9219;InbreedingCoeff=-0.0460;MQ=47.17;MQ0=33;MQRankSum=-2.765;QD=2.01;ReadPosRankSum=-2.409;VQSLOD=1.6920;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:58.61:0,59,765	0/1:17,0:15:65.93:66,0,121	0/0:16,0:2:2.97:0,3,20	0/1:23,0:4:7.76:8,0,15	0/0:13,0:13:7.22:0,7,163	1/1:19,0:17:17.45:112,17,0	1/1:23,0:21:33.61:233,34,0	0/1:40,0:28:20.92:21,0,311	0/1:29,0:26:87.39:87,0,209	0/1:27,0:24:15.27:15,0,300	0/0:7,0:7:8.99:0,9,75	0/0:14,0:13:29.36:0,29,327	0/0:17,0:17:27.98:0,28,357	0/0:19,0:19:31.98:0,32,361	0/1:26,0:23:39.57:40,0,191	0/1:29,0:27:1.27:1,0,321	0/1:39,0:36:51.39:51,0,218	0/0:21,0:19:5.01:0,5,47	0/1:23,0:19:99:99,0,245	0/0:8,5:12:11.81:0,12,90	0/0:36,0:34:39.43:0,39,408	0/0:22,0:21:48.07:0,48,614	0/0:20,0:18:34.56:0,35,342	0/0:34,0:34:56.24:0,56,838	0/0:17,0:17:32.86:0,33,312	0/1:39,0:36:99:121,0,327	0/1:14,0:13:19.65:20,0,84	0/1:9,0:9:2.81:3,0,104
chr10	14055410	.	G	GACAGACAC	6019.43	PASS	AB=0.878;AC=33;AF=0.611;AN=54;BaseQRankSum=0.506;DP=666;FS=2.366;HRun=0;HaplotypeScore=175.4984;InbreedingCoeff=0.7393;MQ=46.78;MQ0=35;MQRankSum=-2.703;QD=13.65;ReadPosRankSum=-1.558;VQSLOD=3.6468;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:37:77.06:0,77,750	1/1:18,0:16:27.79:306,28,0	./.	0/0:24,0:4:5.56:0,6,30	1/1:13,0:13:29.93:306,30,0	0/1:20,0:18:54.37:66,0,54	0/0:22,0:20:3.93:0,4,152	1/1:42,0:29:55.18:377,55,0	1/1:29,0:27:31.60:439,32,0	1/1:27,0:24:42.01:641,42,0	1/1:7,0:7:8.99:75,9,0	0/0:15,0:14:22.16:0,22,348	0/0:14,0:16:7.35:0,7,439	0/1:20,0:20:0.88:1,0,305	1/1:25,0:23:35.61:448,36,0	1/1:30,0:28:56.87:575,57,0	1/1:40,0:36:46.28:642,46,0	1/1:6,11:25:5.17:118,5,0	1/1:25,0:21:21.99:388,22,0	1/1:13,0:12:8.98:74,9,0	1/1:37,0:34:53.02:445,53,0	0/0:21,0:20:40.65:0,41,480	0/0:18,0:17:38.72:0,39,374	0/0:30,0:36:70.83:0,71,877	0/0:16,0:18:37.99:0,38,318	1/1:40,0:36:69.14:851,69,0	0/1:8,0:18:2.47:121,0,2	1/1:7,0:7:17.88:146,18,0
chr10	14055444	.	CA	C	355.10	PASS	AB=0.750;AC=3;AF=0.054;AN=56;BaseQRankSum=3.479;DP=792;FS=12.459;HRun=1;HaplotypeScore=116.7238;InbreedingCoeff=0.5649;MQ=45.60;MQ0=38;MQRankSum=1.803;QD=8.07;ReadPosRankSum=-0.425;VQSLOD=-0.2727;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:41:85.80:0,86,1128	0/0:17,0:15:26.97:0,27,330	0/0:33,0:20:60.19:0,60,761	0/0:31,0:19:57.17:0,57,709	0/0:28,0:25:51.63:0,52,668	1/1:17,9:18:9.09:242,9,0	0/1:12,6:13:14.47:210,0,14	0/0:56,0:47:99:0,139,1693	0/0:33,0:28:44.85:0,45,526	0/0:41,0:38:99:0,114,1490	0/0:10,0:8:6:0,6,62	0/0:19,0:17:42.11:0,42,542	0/0:23,0:23:59.14:0,59,738	0/0:17,0:17:37.93:0,38,510	0/0:23,0:20:23.71:0,24,272	0/0:22,0:20:32.84:0,33,369	0/0:50,0:45:84.81:0,85,1019	0/0:28,0:26:41.94:0,42,471	0/0:35,0:29:85.25:0,85,1025	0/0:16,0:15:27.54:0,28,337	0/0:38,0:35:60.09:0,60,784	0/0:24,0:20:51.17:0,51,753	0/0:23,0:18:42.41:0,42,570	0/0:37,0:37:76.31:0,76,1042	0/0:20,0:20:38.16:0,38,529	0/0:46,0:43:99:0,123,1594	0/0:20,0:19:24.05:0,24,297	0/0:15,0:14:36.11:0,36,444
chr10	14055445	.	A	AGAC	634.29	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=2.758;DP=789;FS=8.920;HRun=0;HaplotypeScore=138.4769;InbreedingCoeff=0.9222;MQ=45.69;MQ0=38;MQRankSum=1.017;QD=14.75;ReadPosRankSum=-0.672;VQSLOD=2.7432;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:42:87.24:0,87,1486	0/0:16,0:14:24.96:0,25,280	0/0:33,0:20:60.21:0,60,1094	0/0:32,0:19:57.18:0,57,973	0/0:28,0:25:51.03:0,51,815	1/1:19,3:18:13.23:396,13,0	1/1:13,2:12:16.76:353,17,0	0/0:55,0:46:99:0,132,2048	0/0:33,0:28:43.42:0,43,597	0/0:42,0:39:99:0,111,1671	0/0:10,0:8:6:0,6,79	0/0:19,0:17:39.12:0,39,673	0/0:23,0:23:57.09:0,57,954	0/0:17,0:17:38.68:0,39,642	0/0:23,0:20:19.29:0,19,234	0/0:21,0:19:29.20:0,29,338	0/0:50,0:45:80.01:0,80,987	0/0:28,0:26:30.64:0,31,538	0/0:35,0:29:81.81:0,82,1179	0/0:15,0:15:27:0,27,450	0/0:36,0:33:59.20:0,59,954	0/0:24,0:20:51.17:0,51,936	0/0:23,0:18:45.14:0,45,769	0/0:38,0:37:78.01:0,78,1389	0/0:20,0:20:39.13:0,39,687	0/0:45,0:42:99:0,121,1680	0/0:21,0:20:18.46:0,18,369	0/0:15,0:14:35.98:0,36,588
chr10	14055738	.	CGCACAT	C	1047.97	PASS	AB=1.000;AC=20;AF=0.400;AN=50;BaseQRankSum=-3.851;DP=669;FS=32.962;HRun=0;HaplotypeScore=132.9545;InbreedingCoeff=-0.1285;MQ=36.81;MQ0=17;MQRankSum=1.773;QD=2.42;ReadPosRankSum=-2.625;VQSLOD=0.5489;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:49,0:46:23.99:245,24,0	0/0:11,0:10:7.98:0,8,89	0/0:13,0:5:2.67:0,3,87	0/0:17,0:3:5.69:0,6,30	./.	0/1:14,0:13:13.97:14,0,19	0/0:30,0:27:15.27:0,15,183	0/0:28,0:27:46.98:0,47,798	0/0:33,0:31:14.17:0,14,159	0/1:29,0:24:83.20:83,0,473	./.	0/1:20,0:18:14.09:76,0,14	0/1:25,0:24:60.35:142,0,60	1/1:32,0:29:7.77:62,8,0	0/0:31,0:28:14.24:0,14,197	0/1:31,0:28:4.33:4,0,140	0/1:22,0:18:81.07:97,0,81	0/1:19,0:15:60.88:61,0,136	0/1:21,0:17:99:99,0,319	0/1:18,0:17:83.35:83,0,88	0/1:30,0:27:32.29:32,0,56	./.	0/0:14,0:9:2.98:0,3,21	1/1:35,0:34:5.22:47,5,0	1/1:12,0:12:1.62:18,2,0	0/1:36,0:29:67.23:67,0,645	0/1:40,0:36:71.06:71,0,377	0/0:17,0:12:30.53:0,31,323
chr10	14055751	.	A	ATG	1091.93	PASS	AB=0.796;AC=16;AF=0.333;AN=48;BaseQRankSum=-5.364;DP=443;FS=0.000;HRun=0;HaplotypeScore=70.4304;InbreedingCoeff=-0.3390;MQ=36.32;MQ0=26;MQRankSum=-2.020;QD=4.55;ReadPosRankSum=0.004;VQSLOD=1.9211;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,12:30:1.23:0,1,3	0/0:6,0:5:6.02:0,6,83	0/0:21,0:5:15.05:0,15,215	0/0:18,0:3:5.75:0,6,32	./.	./.	1/1:0,13:11:3.15:61,3,0	0/1:12,1:11:53.02:53,0,225	0/1:12,8:18:40.97:41,0,84	0/1:12,4:10:38.66:39,0,202	./.	0/1:7,6:11:51.95:52,0,59	0/1:12,9:20:53.26:53,0,107	0/0:11,8:16:3.01:0,3,35	0/1:11,7:15:15.97:16,0,83	0/0:13,7:17:5.89:0,6,95	0/1:14,5:15:42.17:42,0,71	0/1:14,2:11:25.99:137,0,26	0/1:9,3:7:64.53:167,0,65	0/1:9,1:9:76.07:76,0,86	0/0:16,7:20:18:0,18,202	./.	0/0:9,0:5:3.01:0,3,46	1/1:17,5:21:0.47:1,0,0	0/0:8,0:8:6.02:0,6,96	0/1:17,6:20:99:317,0,217	0/1:19,5:20:99:170,0,298	0/0:9,0:3:2.99:0,3,23
chr10	14056483	.	TAAAG	T	1542.52	PASS	AC=42;AF=0.955;AN=44;BaseQRankSum=1.199;DP=118;FS=18.921;HRun=0;HaplotypeScore=65.7516;InbreedingCoeff=0.1760;MQ=23.68;MQ0=35;MQRankSum=1.688;QD=16.24;ReadPosRankSum=1.643;VQSLOD=1.7397;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,0:1:2.68:11,3,0	1/1:1,0:1:2.80:13,3,0	0/0:5,0:1:1.82:0,2,5	./.	1/1:11,2:9:26.26:269,26,0	1/1:1,0:1:2.74:12,3,0	1/1:3,0:1:3.01:41,3,0	./.	1/1:2,0:1:2.74:12,3,0	1/1:7,1:8:22.76:166,23,0	1/1:8,0:7:16.73:150,17,0	1/1:2,0:2:5.34:22,5,0	1/1:1,0:1:2.74:12,3,0	./.	1/1:6,0:6:16.22:91,16,0	1/1:2,0:2:5.49:23,5,0	1/1:1,0:1:3.01:42,3,0	1/1:2,1:2:5.69:70,6,0	./.	1/1:5,0:5:13.77:96,14,0	./.	1/1:3,0:1:2.68:11,3,0	1/1:3,0:2:6.02:85,6,0	./.	1/1:9,0:9:22.75:182,23,0	1/1:5,1:5:13.87:106,14,0	1/1:10,0:8:22:104,22,0	1/1:7,0:6:17.12:108,17,0
chr10	14056491	.	T	TA	3572.80	PASS	AC=46;AF=0.958;AN=48;BaseQRankSum=-0.452;DP=139;FS=0.000;HRun=1;HaplotypeScore=58.1898;InbreedingCoeff=0.0516;MQ=26.26;MQ0=21;MQRankSum=-0.527;QD=27.91;ReadPosRankSum=1.318;VQSLOD=3.3822;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,1:1:3.01:45,3,0	1/1:0,2:2:3.01:45,3,0	0/0:4,0:1:0:0,0,0	./.	1/1:5,9:12:15.73:288,16,0	1/1:0,1:1:3.01:45,3,0	1/1:1,3:3:3.01:44,3,0	1/1:2,2:2:5.97:64,6,0	1/1:0,3:2:5.95:63,6,0	1/1:2,8:10:26.94:348,27,0	1/1:2,8:9:20.98:269,21,0	1/1:0,2:2:6.02:89,6,0	1/1:1,2:3:3.01:45,3,0	./.	1/1:0,8:8:21:283,21,0	1/1:0,5:5:14.85:143,15,0	1/1:0,1:1:3.01:42,3,0	1/1:3,2:3:5.93:61,6,0	1/1:3,2:2:6.02:89,6,0	1/1:1,6:7:18.03:243,18,0	./.	1/1:2,1:2:3.01:45,3,0	1/1:1,2:2:6.02:87,6,0	./.	1/1:1,9:10:24.08:354,24,0	1/1:3,4:7:15:199,15,0	1/1:2,10:11:27.09:401,27,0	1/1:1,7:7:21:284,21,0
chr10	14056626	.	CG	C	7425.94	PASS	AC=52;AF=1.000;AN=52;DP=300;FS=0.000;HRun=3;HaplotypeScore=64.4221;InbreedingCoeff=-0.0274;MQ=30.99;MQ0=64;QD=24.92;VQSLOD=3.8589;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,11:10:21.07:260,21,0	1/1:1,2:2:3.01:37,3,0	./.	./.	1/1:4,9:9:21.07:260,21,0	1/1:2,6:6:12.04:149,12,0	1/1:1,9:9:21.07:260,21,0	1/1:3,13:13:36.11:446,36,0	1/1:0,8:7:21.07:260,21,0	1/1:2,11:11:33.08:386,33,0	1/1:4,5:5:15.05:186,15,0	1/1:2,9:10:30.08:359,30,0	1/1:1,6:6:18.06:222,18,0	1/1:3,11:10:27.08:334,27,0	1/1:3,16:14:33.10:408,33,0	1/1:1,5:5:15.05:186,15,0	1/1:2,3:3:6.02:74,6,0	1/1:3,6:6:18.06:223,18,0	1/1:3,12:11:33.10:408,33,0	1/1:1,20:20:60.19:742,60,0	1/1:7,5:5:3.01:37,3,0	1/1:0,3:3:9.03:111,9,0	1/1:6,7:5:15.05:186,15,0	1/1:2,8:8:21.07:259,21,0	1/1:2,17:17:51.16:632,51,0	1/1:3,11:11:33.10:409,33,0	1/1:5,15:14:42.13:520,42,0	1/1:3,5:5:6.02:74,6,0
chr10	14056775	.	C	CCT	972.18	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=4.242;DP=730;FS=1.965;HRun=0;HaplotypeScore=109.0369;InbreedingCoeff=0.9913;MQ=57.38;MQ0=1;MQRankSum=-1.057;QD=31.36;ReadPosRankSum=0.021;VQSLOD=5.5081;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:93.23:0,93,1284	0/0:5,0:5:15.05:0,15,215	0/0:28,0:23:63.16:0,63,841	0/0:24,0:19:42.14:0,42,597	0/0:27,0:27:71.68:0,72,1028	1/1:3,10:13:30.10:538,30,0	1/1:6,11:17:33.82:556,34,0	0/0:25,0:25:66.21:0,66,912	0/0:25,0:25:72.19:0,72,991	0/0:28,0:28:81.27:0,81,1154	0/0:20,0:20:51.16:0,51,714	0/0:31,0:31:90.29:0,90,1265	0/0:17,0:17:48.16:0,48,686	0/0:30,0:30:78.22:0,78,1094	0/0:39,0:39:99:0,117,1643	0/0:31,0:31:93.25:0,93,1265	0/0:32,0:32:84.21:0,84,1177	0/0:26,0:26:78.19:0,78,1041	0/0:17,0:17:51.17:0,51,727	0/0:21,0:21:60.16:0,60,836	0/0:68,0:68:99:0,186,2533	0/0:18,0:18:48.14:0,48,651	0/0:12,0:12:33.11:0,33,472	0/0:38,0:38:99:0,99,1372	0/0:28,0:28:81.23:0,81,1137	0/0:25,0:25:75.19:0,75,1018	0/0:33,0:33:85.17:0,85,1204	0/0:14,0:14:42.14:0,42,602
chr10	14057642	.	C	CT	505.40	PASS	AB=1.000;AC=6;AF=0.107;AN=56;BaseQRankSum=-5.500;DP=467;FS=0.000;HRun=10;HaplotypeScore=44.0120;InbreedingCoeff=0.5842;MQ=66.60;MQ0=7;MQRankSum=-1.309;QD=8.15;ReadPosRankSum=-0.331;VQSLOD=0.8546;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:32:85.93:0,86,695	0/0:4,0:4:8.99:0,9,74	0/1:18,0:11:11.17:11,0,67	0/0:12,1:7:8.36:0,8,57	0/0:25,0:25:62.87:0,63,514	1/1:3,11:13:24.06:256,24,0	1/1:4,16:20:14.45:359,14,0	0/0:27,0:25:47.97:0,48,373	0/0:11,0:11:10.41:0,10,202	0/0:21,0:21:50.93:0,51,419	0/0:23,1:24:27.91:0,28,433	0/0:11,0:11:32.95:0,33,268	0/0:14,0:14:35.95:0,36,295	0/0:6,0:6:8.99:0,9,74	0/0:13,0:13:32.95:0,33,271	0/0:19,0:19:50.91:0,51,417	0/0:29,0:29:71.87:0,72,587	0/0:16,0:16:41.94:0,42,345	0/0:20,0:19:41.88:0,42,343	0/0:20,0:19:50.91:0,51,416	0/0:12,0:13:34.99:0,35,277	0/0:10,0:10:17.96:0,18,148	0/1:9,0:9:7.96:8,0,146	0/0:7,0:7:17.96:0,18,144	0/0:15,0:15:44.93:0,45,366	0/0:20,0:19:53.91:0,54,440	0/0:21,0:21:53.93:0,54,443	0/0:14,0:14:35:0,35,277
chr10	14057849	.	TA	T	4070.93	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=2.261;DP=540;FS=3.332;HRun=12;HaplotypeScore=72.3787;InbreedingCoeff=0.9003;MQ=68.62;MQ0=13;MQRankSum=1.104;QD=13.22;ReadPosRankSum=4.073;VQSLOD=4.1277;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:26:65.94:0,66,640	1/1:4,5:10:18.98:128,19,0	0/0:47,0:21:13.29:0,13,145	0/0:46,0:18:3.18:0,3,58	1/1:7,25:31:62.64:481,63,0	0/0:9,0:8:12.02:0,12,120	0/0:21,0:21:30.52:0,31,297	1/1:10,16:24:35.80:276,36,0	1/1:3,13:16:29.87:232,30,0	1/1:1,14:16:41.83:325,42,0	1/1:4,11:16:25.84:184,26,0	0/0:13,0:13:3.90:0,4,208	0/0:9,0:9:24.04:0,24,239	0/0:11,0:11:24.03:0,24,237	1/1:3,5:8:8.96:70,9,0	1/1:5,8:13:17.52:126,18,0	1/1:8,20:30:51.87:383,52,0	1/1:10,15:25:4.88:224,5,0	1/1:6,12:18:35.84:276,36,0	1/1:7,15:23:48.87:360,49,0	1/1:4,8:12:11.94:93,12,0	0/0:13,0:13:15.01:0,15,140	0/0:9,0:8:21.04:0,21,213	0/0:15,0:14:27.01:0,27,255	0/0:10,0:10:27.06:0,27,274	1/1:5,16:21:47.78:369,48,0	1/1:4,19:24:8.56:290,9,0	1/1:4,13:17:16.54:256,17,0
chr10	14057862	.	G	GATTT	1165.11	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-4.255;DP=483;FS=0.873;HRun=0;HaplotypeScore=102.9657;InbreedingCoeff=0.8945;MQ=68.77;MQ0=5;MQRankSum=-1.156;QD=48.55;ReadPosRankSum=1.068;VQSLOD=4.5371;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:66.18:0,66,1067	0/0:8,0:8:15.05:0,15,268	0/0:33,0:16:7.40:0,7,126	0/0:30,0:16:20.28:0,20,281	0/0:29,0:29:75.24:0,75,1299	1/1:1,4:4:9.03:234,9,0	1/1:6,13:19:42.14:1046,42,0	0/0:28,0:28:57.18:0,57,989	0/0:14,0:14:33.11:0,33,578	0/0:20,0:20:54.18:0,54,939	0/0:15,0:15:39.11:0,39,638	0/0:8,0:8:21.07:0,21,372	0/0:9,0:9:24.08:0,24,431	0/0:9,0:9:24.07:0,24,402	0/0:10,0:10:21.07:0,21,371	0/0:15,0:15:36.12:0,36,644	0/0:26,0:26:57.16:0,57,966	0/0:22,0:22:46.60:0,47,726	0/0:25,0:24:69.19:0,69,1195	0/0:21,0:21:51.16:0,51,869	0/0:9,0:9:15.03:0,15,238	0/0:5,0:5:15.04:0,15,241	0/0:9,0:9:18.04:0,18,283	0/0:11,0:11:27.09:0,27,485	0/0:12,0:12:33.11:0,33,587	0/0:22,0:22:60.21:0,60,1066	0/0:26,0:26:51.17:0,51,880	0/0:14,0:14:30.10:0,30,533
chr10	14058867	.	CG	C	18683.22	PASS	AC=54;AF=0.964;AN=56;BaseQRankSum=-1.732;DP=528;FS=0.000;HRun=1;HaplotypeScore=187.4627;InbreedingCoeff=0.7014;MQ=42.65;MQ0=1;MQRankSum=-1.724;QD=35.72;ReadPosRankSum=1.610;VQSLOD=4.3817;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,31:33:93.31:1296,93,0	1/1:3,6:7:18.05:236,18,0	1/1:1,5:3:8.62:94,9,0	0/0:2,3:2:2.74:0,3,12	1/1:2,25:26:66.21:904,66,0	1/1:1,18:19:57.19:789,57,0	1/1:0,21:21:51.13:690,51,0	1/1:0,19:17:36.12:503,36,0	1/1:2,29:31:93.29:1278,93,0	1/1:1,17:18:51.12:711,51,0	1/1:0,11:10:18.06:252,18,0	1/1:0,36:36:99:1423,102,0	1/1:0,17:17:48.16:670,48,0	1/1:2,20:22:63.21:879,63,0	1/1:1,31:31:93.27:1276,93,0	1/1:0,18:18:54.18:754,54,0	1/1:0,17:17:45.15:628,45,0	1/1:0,12:12:36.12:499,36,0	1/1:0,16:12:30.10:417,30,0	1/1:1,12:12:33.10:445,33,0	1/1:3,24:27:60.14:798,60,0	1/1:1,20:19:51.17:711,51,0	1/1:0,10:9:21.07:293,21,0	1/1:0,16:15:39.09:522,39,0	1/1:0,20:17:48.16:669,48,0	1/1:1,17:17:48.15:649,48,0	1/1:3,24:27:75.25:1044,75,0	1/1:0,7:6:18.06:252,18,0
chr10	14058892	.	GC	G	15187.34	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-1.358;DP=485;FS=3.019;HRun=2;HaplotypeScore=246.7697;InbreedingCoeff=0.7526;MQ=35.80;MQ0=0;MQRankSum=-2.443;QD=31.57;ReadPosRankSum=1.094;VQSLOD=4.1895;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,32:32:87.27:1078,87,0	1/1:0,6:5:15.05:190,15,0	0/0:3,0:2:3.01:0,3,42	0/0:1,0:1:2.74:0,3,12	1/1:2,20:21:39.11:484,39,0	1/1:0,19:19:57.18:727,57,0	1/1:1,19:19:48.15:608,48,0	1/1:2,27:25:69.22:889,69,0	1/1:4,26:30:72.23:925,72,0	1/1:2,18:17:51.16:657,51,0	1/1:2,7:8:12.04:146,12,0	1/1:3,27:30:81.26:1035,81,0	1/1:0,13:13:39.13:505,39,0	1/1:0,26:26:75.24:968,75,0	1/1:0,32:32:93.30:1197,93,0	1/1:1,17:18:54.17:692,54,0	1/1:2,15:16:39.12:497,39,0	1/1:1,11:12:30.10:389,30,0	1/1:1,11:10:30.10:389,30,0	1/1:0,11:9:21.07:265,21,0	1/1:2,14:16:27.97:352,28,0	1/1:0,19:16:45.15:583,45,0	1/1:0,12:9:21.05:253,21,0	1/1:2,15:16:35.97:462,36,0	1/1:0,18:15:42.13:534,42,0	1/1:0,18:17:48.16:618,48,0	1/1:1,13:14:39.13:505,39,0	1/1:2,6:7:21.01:238,21,0
chr10	14058905	.	GT	G	15817.80	PASS	AC=52;AF=0.963;AN=54;BaseQRankSum=-0.209;DP=442;FS=0.000;HRun=1;HaplotypeScore=245.9261;InbreedingCoeff=0.7098;MQ=32.77;MQ0=0;MQRankSum=-1.732;QD=35.95;ReadPosRankSum=1.705;VQSLOD=4.1445;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,29:28:78.26:1082,78,0	1/1:0,6:5:15.05:209,15,0	0/0:2,0:2:2.94:0,3,26	./.	1/1:0,15:14:36.10:474,36,0	1/1:0,19:19:57.19:792,57,0	1/1:0,20:19:57.19:786,57,0	1/1:0,33:27:78.26:1088,78,0	1/1:0,23:23:69.23:959,69,0	1/1:0,23:18:54.18:742,54,0	1/1:0,5:4:9.03:125,9,0	1/1:0,21:21:60.20:834,60,0	1/1:0,12:12:36.12:500,36,0	1/1:0,22:22:63.21:874,63,0	1/1:0,32:31:93.31:1286,93,0	1/1:0,15:15:45.15:625,45,0	1/1:0,13:12:27.09:375,27,0	1/1:0,12:12:33.11:455,33,0	1/1:0,12:10:30.10:417,30,0	1/1:1,7:7:21.07:288,21,0	1/1:0,16:15:26.81:375,27,0	1/1:0,19:15:45.15:618,45,0	1/1:0,11:8:18.06:249,18,0	1/1:0,15:14:30.06:417,30,0	1/1:0,15:13:39.13:542,39,0	1/1:0,22:21:63.21:872,63,0	1/1:0,14:14:39.13:543,39,0	1/1:0,8:7:21.07:293,21,0
chr10	14058910	.	GC	G	12629.43	PASS	AB=1.000;AC=53;AF=0.981;AN=54;DP=484;FS=0.000;HRun=4;HaplotypeScore=270.7481;InbreedingCoeff=0.5525;MQ=32.17;MQ0=0;QD=26.09;VQSLOD=2.4123;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,27:31:72.19:830,72,0	1/1:1,6:6:18.04:202,18,0	0/1:1,0:1:0:0,0,0	./.	1/1:1,14:14:36:405,36,0	1/1:3,17:20:54.15:628,54,0	1/1:2,21:22:63.03:697,63,0	1/1:9,25:27:57.17:680,57,0	1/1:5,20:25:60.13:688,60,0	1/1:2,26:23:66.18:764,66,0	1/1:1,4:4:9.03:106,9,0	1/1:0,21:21:59.92:673,60,0	1/1:1,12:13:36.07:411,36,0	1/1:3,23:26:69.05:749,69,0	1/1:2,32:33:90.20:1046,90,0	1/1:2,16:18:48.01:520,48,0	1/1:2,12:13:30.02:338,30,0	1/1:2,12:14:39.05:429,39,0	1/1:3,10:11:27.08:322,27,0	1/1:0,9:8:21.06:249,21,0	1/1:4,16:19:21.02:231,21,0	1/1:3,17:16:36.11:426,36,0	1/1:1,12:9:18.05:208,18,0	1/1:4,13:16:27.04:320,27,0	1/1:2,14:14:33.09:382,33,0	1/1:5,18:22:57.17:670,57,0	1/1:3,12:15:39.09:441,39,0	1/1:2,6:7:18.06:215,18,0
chr10	14058917	.	AG	A	16519.46	PASS	AC=52;AF=0.963;AN=54;BaseQRankSum=1.237;DP=492;FS=0.000;HRun=1;HaplotypeScore=243.6914;InbreedingCoeff=0.7467;MQ=38.13;MQ0=1;MQRankSum=-1.732;QD=33.71;ReadPosRankSum=1.446;VQSLOD=4.1724;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,30:29:72.24:1003,72,0	1/1:0,7:6:18.06:250,18,0	0/0:2,0:2:2.90:0,3,22	./.	1/1:1,16:16:42.14:580,42,0	1/1:0,21:21:57.19:793,57,0	1/1:2,23:24:69.23:961,69,0	1/1:1,29:23:63.21:879,63,0	1/1:0,27:27:65.95:914,66,0	1/1:0,28:23:69.23:959,69,0	1/1:2,4:5:15.05:208,15,0	1/1:2,21:23:69.20:939,69,0	1/1:1,12:13:39.12:526,39,0	1/1:0,28:28:72.24:992,72,0	1/1:0,37:36:96.32:1332,96,0	1/1:0,20:20:54.18:752,54,0	1/1:0,13:12:30.10:418,30,0	1/1:0,14:14:39.13:538,39,0	1/1:0,10:10:27.09:377,27,0	1/1:0,9:8:21.07:292,21,0	1/1:0,22:21:30.10:418,30,0	1/1:0,17:13:36.12:500,36,0	1/1:0,13:9:18.06:245,18,0	1/1:0,14:14:30.08:417,30,0	1/1:1,17:16:33.11:447,33,0	1/1:0,23:23:66.20:902,66,0	1/1:0,19:19:45.15:627,45,0	1/1:0,6:6:18.06:251,18,0
chr10	14059186	.	GA	G	1164.91	PASS	AC=4;AF=0.074;AN=54;BaseQRankSum=6.201;DP=729;FS=8.114;HRun=2;HaplotypeScore=68.4468;InbreedingCoeff=0.9471;MQ=54.83;MQ0=21;MQRankSum=1.572;QD=24.79;ReadPosRankSum=-0.715;VQSLOD=2.4344;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:27:75.22:0,75,1081	0/0:11,0:11:33.11:0,33,494	./.	0/0:24,0:2:6.01:0,6,71	0/0:20,0:19:42.10:0,42,610	1/1:0,11:10:27.09:351,27,0	1/1:0,36:34:72.18:935,72,0	0/0:22,0:16:45.08:0,45,594	0/0:31,0:31:93.26:0,93,1314	0/0:33,0:29:87.25:0,87,1245	0/0:16,0:15:33.11:0,33,493	0/0:39,0:39:99:0,108,1592	0/0:34,0:34:99:0,102,1526	0/0:20,0:20:60.20:0,60,899	0/0:26,0:26:78.23:0,78,1112	0/0:27,0:27:78.25:0,78,1148	0/0:31,0:31:90.30:0,90,1349	0/0:48,0:46:99:0,132,1912	0/0:11,0:11:33.07:0,33,451	0/0:20,0:19:48.15:0,48,698	0/0:79,0:79:99:0,193,2813	0/0:17,0:12:30.10:0,30,447	0/0:16,0:14:39.09:0,39,558	0/0:33,0:33:99:0,99,1484	0/0:22,0:22:63.19:0,63,922	0/0:17,0:16:48.16:0,48,720	0/0:20,0:19:60.20:0,60,893	0/0:15,0:15:45.12:0,45,631
chr10	14059558	.	GAC	G	1123.47	PASS	AB=0.909;AC=5;AF=0.089;AN=56;BaseQRankSum=9.298;DP=710;FS=11.558;HRun=0;HaplotypeScore=87.0198;InbreedingCoeff=0.6989;MQ=61.32;MQ0=11;MQRankSum=1.353;QD=19.71;ReadPosRankSum=0.882;VQSLOD=3.0208;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,1:43:67.81:0,68,1591	0/1:9,1:10:13.44:13,0,323	0/0:42,0:22:35.99:0,36,522	0/0:32,0:24:47.39:0,47,546	0/0:26,1:27:54.18:0,54,891	1/1:6,21:27:48.15:600,48,0	1/1:1,19:20:51.16:638,51,0	0/0:42,3:45:4.38:0,4,1316	0/0:23,1:23:28.71:0,29,996	0/0:33,0:33:46.82:0,47,1246	0/0:19,0:19:36.06:0,36,567	0/0:16,0:16:39.13:0,39,644	0/0:23,1:24:25.70:0,26,949	0/0:17,0:17:45.14:0,45,707	0/0:19,0:19:54.18:0,54,889	0/0:28,0:28:75.26:0,75,1235	0/0:25,0:25:66.16:0,66,996	0/0:16,0:16:42.10:0,42,638	0/0:36,0:36:87.24:0,87,1362	0/0:21,1:22:4.62:0,5,600	0/0:39,0:39:99:0,102,1646	0/0:11,0:11:27.09:0,27,446	0/0:17,0:17:27.09:0,27,445	0/0:29,0:29:78.03:0,78,1192	0/0:17,0:17:39.13:0,39,641	0/0:27,0:27:66.21:0,66,1056	0/0:27,0:26:72.18:0,72,1087	0/0:16,0:16:27.09:0,27,445
chr10	14060206	.	G	GA	729.98	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-5.269;DP=402;FS=0.803;HRun=6;HaplotypeScore=38.0656;InbreedingCoeff=0.9357;MQ=75.86;MQ0=0;MQRankSum=0.582;QD=25.17;ReadPosRankSum=-1.312;VQSLOD=2.3187;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:66.03:0,66,633	0/0:4,0:4:12.03:0,12,122	0/0:13,0:12:17.19:0,17,200	0/0:8,0:8:12.02:0,12,118	0/0:23,0:23:63.12:0,63,634	1/1:2,14:16:39.07:473,39,0	1/1:1,12:13:30.10:378,30,0	0/0:27,0:27:77.84:0,78,747	0/0:13,0:13:36.06:0,36,360	0/0:14,0:14:39.08:0,39,397	0/0:20,0:20:57.11:0,57,575	0/0:10,0:10:27.04:0,27,264	0/0:9,0:8:21.03:0,21,206	0/0:12,0:12:33.04:0,33,317	0/0:14,0:12:27.02:0,27,264	0/0:15,0:14:42.05:0,42,417	0/0:17,0:17:51.11:0,51,518	0/0:20,0:20:57.07:0,57,562	0/0:10,0:10:24.04:0,24,239	0/0:21,0:21:54.10:0,54,543	0/0:9,0:9:24.01:0,24,230	0/0:11,0:11:33.08:0,33,336	0/0:18,0:18:51.11:0,51,519	0/0:6,0:6:15.03:0,15,153	0/0:17,0:17:42.08:0,42,423	0/0:11,0:11:24.05:0,24,245	0/0:24,0:23:56.99:0,57,537	0/0:4,0:4:12.03:0,12,122
chr10	14060435	.	G	GA	1087.53	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-6.675;DP=530;FS=1.363;HRun=8;HaplotypeScore=80.1706;InbreedingCoeff=0.9824;MQ=70.67;MQ0=2;MQRankSum=0.058;QD=25.29;ReadPosRankSum=1.131;VQSLOD=4.3687;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:30:75.02:0,75,686	0/0:5,0:5:15.01:0,15,137	0/0:21,0:15:15.84:0,16,212	0/0:28,0:23:45.55:0,46,385	0/0:21,0:20:54.03:0,54,493	1/1:0,20:20:54.16:621,54,0	1/1:4,19:23:51.15:589,51,0	0/0:18,0:18:42:0,42,381	0/0:16,0:16:42.01:0,42,382	0/0:27,0:27:78.04:0,78,713	0/0:17,0:17:50.06:0,50,445	0/0:11,0:11:30.02:0,30,274	0/0:8,0:8:20.97:0,21,184	0/0:17,0:17:35.97:0,36,316	0/0:20,0:20:48.02:0,48,439	0/0:26,0:26:71.83:0,72,644	0/0:20,0:19:51.02:0,51,465	0/0:16,0:16:45.02:0,45,412	0/0:18,0:18:33:0,33,302	0/0:13,0:13:39.02:0,39,357	0/0:19,0:19:51.02:0,51,467	0/0:16,0:16:39:0,39,357	0/0:13,0:13:39.02:0,39,357	0/0:31,0:31:84.04:0,84,767	0/0:19,0:19:45.02:0,45,412	0/0:22,0:22:60.03:0,60,549	0/0:19,0:19:53.98:0,54,485	0/0:14,0:14:42.02:0,42,384
chr10	14060924	.	A	AT	2981.71	PASS	AB=0.796;AC=32;AF=0.571;AN=56;BaseQRankSum=-6.432;DP=394;FS=6.998;HRun=11;HaplotypeScore=41.2396;InbreedingCoeff=0.5770;MQ=65.61;MQ0=9;MQRankSum=-1.316;QD=9.94;ReadPosRankSum=0.013;VQSLOD=1.6830;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:56.71:0,57,432	1/1:0,1:2:3.01:30,3,0	0/1:36,0:11:5.37:5,0,9	0/1:29,0:5:0:0,0,0	1/1:8,12:21:2.18:214,2,0	0/0:6,0:7:16.97:0,17,122	0/0:9,0:9:19.95:0,20,145	1/1:8,18:26:30.84:413,31,0	1/1:2,5:7:14.48:150,14,0	1/1:6,11:16:9.90:256,10,0	1/1:8,15:22:35.99:349,36,0	0/0:9,0:9:26.89:0,27,206	0/0:3,0:3:5.98:0,6,46	0/0:7,0:7:14.89:0,15,111	1/1:2,4:6:9.02:91,9,0	1/1:8,5:12:0.29:162,0,0	0/1:9,15:23:3.94:253,0,4	1/1:5,12:17:3.70:203,4,0	1/1:4,6:9:17.77:163,18,0	1/1:4,9:14:15.03:151,15,0	1/1:3,2:6:3.01:30,3,0	0/0:3,0:3:5.96:0,6,46	0/0:5,0:5:8.96:0,9,69	0/0:9,0:8:20.88:0,21,157	0/0:15,0:14:29.83:0,30,228	1/1:6,12:18:12.92:276,13,0	0/1:4,11:16:10.46:250,0,10	1/1:4,7:12:0.73:173,1,0
chr10	14064359	.	TGAAGTGCCTAGCCCC	T	423.02	PASS	AB=0.966;AC=17;AF=0.304;AN=56;BaseQRankSum=9.110;DP=552;FS=0.000;HRun=0;HaplotypeScore=203.5610;InbreedingCoeff=0.0763;MQ=51.84;MQ0=28;MQRankSum=0.101;QD=2.13;ReadPosRankSum=3.561;VQSLOD=2.5799;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:32:70.74:0,71,1004	0/1:7,0:5:13.05:63,0,13	1/1:15,0:2:2.04:6,2,0	0/1:25,0:1:0:0,0,0	0/0:11,0:8:6.36:0,6,38	0/0:10,0:8:3.93:0,4,36	0/0:28,0:21:6.84:0,7,54	0/0:15,0:2:6:0,6,52	0/1:15,0:14:12.51:13,0,36	0/1:17,0:13:30.12:30,0,39	0/1:5,0:5:14.99:19,0,15	0/0:33,0:33:80.91:0,81,1139	0/0:37,0:37:76.12:0,76,1035	0/0:35,0:35:83.99:0,84,1145	1/1:19,0:17:0.76:99,1,0	1/1:14,0:13:16.64:152,17,0	0/1:22,0:19:24.32:24,0,54	0/1:16,0:13:9.64:32,0,10	0/1:14,0:7:8.11:8,0,51	0/0:9,0:8:1.93:0,2,6	0/0:42,0:33:7.27:0,7,138	0/0:22,0:18:44.76:0,45,518	0/0:20,0:19:44.07:0,44,550	0/0:39,0:39:98.99:0,99,1510	0/0:19,0:19:47.95:0,48,566	0/1:7,11:14:13.59:84,0,14	0/1:8,0:7:5.94:41,0,6	0/1:4,0:3:0:0,0,0
chr10	14066207	.	CT	C	7266.87	PASS	AB=0.920;AC=38;AF=0.679;AN=56;BaseQRankSum=9.479;DP=660;FS=13.461;HRun=11;HaplotypeScore=73.5067;InbreedingCoeff=0.8537;MQ=70.59;MQ0=4;MQRankSum=-2.228;QD=16.59;ReadPosRankSum=1.503;VQSLOD=4.6288;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:48,1:51:99:0,101,1250	1/1:4,4:9:11.01:80,11,0	0/1:22,3:20:32.14:32,0,246	0/1:16,1:11:3.67:4,0,141	1/1:2,22:24:59.86:486,60,0	1/1:4,11:14:29.95:246,30,0	1/1:4,14:17:35.95:295,36,0	1/1:10,21:31:62.68:491,63,0	1/1:3,19:21:24.94:411,25,0	1/1:4,27:31:80.90:665,81,0	1/1:3,12:15:29.96:246,30,0	0/0:24,0:24:63.16:0,63,672	0/0:11,0:11:27.07:0,27,288	0/0:22,0:22:41.68:0,42,418	1/1:2,20:22:56.93:468,57,0	1/1:2,12:13:35.95:296,36,0	1/1:3,41:42:99:961,117,0	1/1:2,18:20:21.95:386,22,0	1/1:7,21:28:27.88:433,28,0	1/1:5,14:18:41.94:345,42,0	1/1:6,11:18:27.43:225,27,0	0/0:18,1:19:29.48:0,29,512	0/0:29,0:32:74.69:0,75,745	0/0:32,0:32:74.46:0,74,763	0/0:31,0:30:78.20:0,78,830	1/1:7,24:31:68.87:563,69,0	1/1:5,22:27:34.41:485,34,0	1/1:1,6:7:17.98:148,18,0
chr10	14067162	.	CTGTGTGTGTGTG	C	3767.82	PASS	AB=0.692;AC=23;AF=0.460;AN=50;BaseQRankSum=6.862;DP=619;FS=15.436;HRun=0;HaplotypeScore=190.4514;InbreedingCoeff=0.6880;MQ=66.22;MQ0=20;MQRankSum=-7.876;QD=17.05;ReadPosRankSum=0.613;VQSLOD=1.8613;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:52:34.40:0,34,1066	1/1:7,2:9:3.01:103,3,0	./.	./.	0/1:15,12:27:10.65:245,0,11	0/0:15,0:20:28.88:0,29,1038	0/0:24,0:29:43.40:0,43,1635	0/0:24,0:24:4.88:0,5,15	1/1:11,4:17:18.06:539,18,0	1/1:20,8:28:16.76:555,17,0	1/1:5,5:12:8.75:189,9,0	0/0:16,0:21:18.06:0,18,824	0/0:18,0:25:22.59:0,23,817	0/0:19,0:22:18.06:0,18,675	1/1:11,6:18:18.06:519,18,0	1/1:7,6:14:15.52:496,16,0	1/1:12,5:17:2.49:102,2,0	1/1:15,1:15:0.50:40,0,0	0/0:13,0:13:1.23:0,1,3	1/1:14,7:21:14.78:381,15,0	0/0:36,6:41:0:0,0,1	0/0:21,0:21:39.13:0,39,1850	0/0:6,0:6:3.01:0,3,111	0/0:20,0:33:26.29:0,26,1075	0/0:22,0:22:18.06:0,18,887	./.	1/1:18,7:24:6.02:206,6,0	1/1:7,6:13:12.04:393,12,0
chr10	14067516	.	CT	C	9053.67	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=10.497;DP=529;FS=0.789;HRun=8;HaplotypeScore=59.5825;InbreedingCoeff=0.9882;MQ=66.76;MQ0=4;MQRankSum=-3.477;QD=24.74;ReadPosRankSum=0.897;VQSLOD=5.5701;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,120,1417	1/1:1,6:7:15.02:145,15,0	0/0:14,0:9:21.06:0,21,245	0/0:14,0:11:23.94:0,24,246	1/1:2,22:24:60.09:577,60,0	1/1:1,15:16:42.06:404,42,0	1/1:0,9:9:27.04:260,27,0	1/1:5,26:31:78.12:753,78,0	1/1:1,14:15:33.05:318,33,0	1/1:2,13:15:39.06:376,39,0	1/1:0,13:13:39.06:374,39,0	0/0:15,0:15:42.12:0,42,496	0/0:16,0:16:45.14:0,45,544	0/0:11,0:11:33.09:0,33,388	1/1:0,26:26:72.11:695,72,0	1/1:1,21:22:51.08:492,51,0	1/1:0,24:24:66.11:637,66,0	1/1:2,19:21:54.08:522,54,0	1/1:4,25:29:69.06:653,69,0	1/1:2,19:21:57.09:548,57,0	1/1:2,18:20:48.08:464,48,0	0/0:11,0:11:18.06:0,18,217	0/0:5,0:5:15.05:0,15,181	0/0:15,0:15:36.10:0,36,423	0/0:14,0:14:30.56:0,31,363	1/1:6,36:42:99:1033,108,0	1/1:1,25:26:72.11:693,72,0	1/1:1,4:5:12:110,12,0
chr10	14069186	.	ATT	A	6313.22	PASS	AB=0.560;AC=35;AF=0.625;AN=56;BaseQRankSum=-10.319;DP=459;FS=0.407;HRun=12;HaplotypeScore=77.5346;InbreedingCoeff=0.7705;MQ=68.76;MQ0=12;MQRankSum=-1.533;QD=19.98;ReadPosRankSum=-0.026;VQSLOD=4.1928;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:20:39.93:0,40,140	1/1:1,10:11:27.06:275,27,0	0/0:21,0:18:26.88:0,27,412	0/0:14,0:9:18.06:0,18,231	1/1:3,21:23:63.12:641,63,0	0/0:1,0:14:24.95:0,25,88	0/1:5,1:16:20.70:21,0,51	1/1:8,20:28:59.78:592,60,0	1/1:2,6:7:18.03:183,18,0	1/1:3,11:15:35.84:349,36,0	1/1:1,12:13:36.08:366,36,0	0/0:3,0:13:20.48:0,20,104	0/0:2,0:8:12.35:0,12,43	0/0:2,0:15:33.41:0,33,115	1/1:3,9:12:21.02:214,21,0	1/1:0,15:13:39.09:397,39,0	1/1:3,25:26:66.15:671,66,0	1/1:2,10:12:12.93:283,13,0	1/1:2,7:9:23.78:225,24,0	1/1:11,21:33:65.57:705,66,0	1/1:2,15:17:7.12:389,7,0	0/0:6,0:10:12.48:0,12,44	0/0:1,1:23:39.13:0,39,185	0/1:1,1:12:5.05:5,0,53	0/1:4,1:14:7.54:8,0,47	1/1:4,16:21:44.78:501,45,0	1/1:4,12:16:35.93:369,36,0	1/1:2,4:6:12.01:122,12,0
chr10	14069906	.	AT	A	827.73	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.886;DP=547;FS=0.000;HRun=7;HaplotypeScore=53.5742;InbreedingCoeff=0.9603;MQ=70.62;MQ0=0;MQRankSum=0.922;QD=24.35;ReadPosRankSum=0.574;VQSLOD=3.7848;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:54.17:0,54,679	0/0:7,0:7:18.06:0,18,227	0/0:11,0:11:21.51:0,22,194	0/0:5,0:5:9.02:0,9,98	0/0:24,0:24:69.22:0,69,868	1/1:0,24:24:69.16:704,69,0	1/1:2,8:10:24.05:245,24,0	0/0:28,0:28:81.24:0,81,995	0/0:17,0:17:51.15:0,51,626	0/0:36,0:36:99:0,108,1339	0/0:33,0:33:81.26:0,81,1019	0/0:8,0:8:24.08:0,24,302	0/0:12,0:12:36.12:0,36,453	0/0:20,0:20:57.17:0,57,705	0/0:20,0:20:60.19:0,60,755	0/0:14,0:14:36.12:0,36,453	0/0:22,0:22:63.20:0,63,789	0/0:27,0:27:78.18:0,78,931	0/0:18,0:18:51.16:0,51,641	0/0:27,0:27:78.24:0,78,970	0/0:13,0:13:33.11:0,33,414	0/0:18,0:18:48.13:0,48,580	0/0:9,0:9:27.09:0,27,340	0/0:7,0:7:21.06:0,21,252	0/0:18,0:18:54.16:0,54,667	0/0:33,0:33:93.29:0,93,1158	0/0:37,0:37:99:0,108,1345	0/0:27,0:27:72.23:0,72,904
chr10	14070457	.	CCCCGGG	C	3747.85	PASS	AB=0.954;AC=26;AF=0.464;AN=56;BaseQRankSum=10.330;DP=463;FS=41.249;HRun=0;HaplotypeScore=105.5166;InbreedingCoeff=0.2737;MQ=75.34;MQ0=0;MQRankSum=-7.013;QD=11.94;ReadPosRankSum=10.035;VQSLOD=-0.4417;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:67.09:0,67,1242	0/1:7,1:8:9.21:150,0,9	0/0:20,0:18:36.20:0,36,815	0/0:19,0:17:47.47:0,47,798	0/1:21,2:23:26.37:139,0,26	0/1:14,0:14:46.63:62,0,47	0/1:18,0:18:7.45:222,0,7	0/1:19,0:19:26.97:371,0,27	0/1:17,0:17:41.44:146,0,41	1/1:18,1:19:2.82:301,3,0	1/1:12,0:12:2.97:29,3,0	0/0:17,0:17:48.05:0,48,947	0/0:9,0:9:26.93:0,27,459	0/0:5,0:5:12.04:0,12,232	0/1:26,1:27:8.90:292,0,9	1/1:26,1:27:24.75:405,25,0	0/1:22,1:23:40.98:213,0,41	1/1:8,0:8:10.54:90,11,0	0/1:10,3:12:29.08:282,0,29	1/1:18,1:19:27.05:301,27,0	1/1:19,0:19:12.43:117,12,0	0/0:10,0:10:24.08:0,24,567	0/0:11,0:11:18.06:0,18,463	0/0:22,0:22:58.99:0,59,1091	0/0:10,0:10:26.83:0,27,560	0/1:18,0:18:1.02:233,0,1	1/1:16,1:17:21.01:243,21,0	1/1:13,0:13:14.91:151,15,0
chr10	14070458	.	CCCGGG	C	6453.32	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=7.021;DP=411;FS=20.503;HRun=0;HaplotypeScore=81.1403;InbreedingCoeff=0.9365;MQ=77.18;MQ0=0;MQRankSum=-7.824;QD=24.44;ReadPosRankSum=9.259;VQSLOD=2.5497;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:61.02:0,61,1038	1/1:1,6:7:12.04:205,12,0	0/0:21,0:19:24.65:0,25,738	0/0:17,0:15:39.29:0,39,619	1/1:4,19:23:12.46:221,12,0	1/1:2,11:13:8.96:153,9,0	1/1:1,13:14:26.63:542,27,0	1/1:4,10:14:27.05:472,27,0	1/1:1,12:13:19.28:367,19,0	1/1:2,11:13:24.07:449,24,0	1/1:1,9:10:3.01:60,3,0	0/0:17,0:17:42.10:0,42,803	0/0:8,0:8:18.06:0,18,349	0/0:6,0:6:14.98:0,15,266	1/1:4,18:22:30.06:589,30,0	1/1:4,22:26:42.08:784,42,0	1/1:3,14:17:21.01:407,21,0	1/1:0,7:7:12.04:216,12,0	1/1:3,6:9:20.96:283,21,0	1/1:3,15:18:26.30:524,26,0	1/1:0,16:16:12.51:243,13,0	0/0:9,0:9:24.06:0,24,472	0/0:9,0:9:18.05:0,18,415	0/0:22,0:22:55.91:0,56,869	0/0:10,0:10:25.35:0,25,450	1/1:1,17:18:21.01:309,21,0	1/1:1,14:15:21.07:406,21,0	1/1:1,8:9:14.87:222,15,0
chr10	14070459	.	CCGGG	C	4557.52	PASS	AB=1.000;AC=37;AF=0.661;AN=56;BaseQRankSum=10.037;DP=440;FS=4.571;HRun=0;HaplotypeScore=85.8613;InbreedingCoeff=0.8447;MQ=75.30;MQ0=0;MQRankSum=-8.156;QD=16.34;ReadPosRankSum=10.292;VQSLOD=2.8835;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:45.10:0,45,929	1/1:7,0:7:12.04:155,12,0	0/1:21,0:19:12.62:13,0,651	0/0:16,0:14:26.98:0,27,434	1/1:21,1:22:12.04:175,12,0	1/1:11,1:12:9.02:129,9,0	1/1:13,0:14:27.08:334,27,0	1/1:14,0:14:27.07:425,27,0	1/1:13,0:13:4.75:209,5,0	1/1:12,1:13:24.07:330,24,0	1/1:10,0:10:3.01:42,3,0	0/0:23,0:23:54.07:0,54,1207	0/0:12,0:12:36.05:0,36,693	0/0:12,0:12:27.09:0,27,659	1/1:20,1:21:30.09:375,30,0	1/1:25,1:26:42.12:554,42,0	1/1:15,0:15:21.06:263,21,0	1/1:7,0:7:11.71:124,12,0	1/1:9,0:9:13.67:222,14,0	1/1:18,0:18:27.09:363,27,0	1/1:16,0:16:12.51:151,13,0	0/0:14,0:14:33.11:0,33,745	0/0:11,0:11:21.07:0,21,510	0/0:28,0:28:55.97:0,56,1129	0/0:17,0:17:41.85:0,42,906	1/1:17,0:17:21.04:285,21,0	1/1:15,0:15:21.01:262,21,0	1/1:9,0:9:14.52:147,15,0
chr10	14071441	.	A	ACTATAGTGAGAT	17411.54	PASS	AB=1.000;AC=37;AF=0.661;AN=56;BaseQRankSum=0.925;DP=699;FS=0.000;HRun=0;HaplotypeScore=223.5053;InbreedingCoeff=0.8722;MQ=67.46;MQ0=0;MQRankSum=-8.214;QD=33.87;ReadPosRankSum=-1.365;VQSLOD=4.1136;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:57.14:0,57,1636	1/1:5,0:6:9.02:130,9,0	0/0:30,0:28:20.38:0,20,237	0/1:34,0:33:2.90:3,0,418	1/1:29,0:30:12.02:333,12,0	1/1:5,22:30:3.01:176,3,0	1/1:12,0:17:24.07:457,24,0	1/1:47,0:45:78.19:1535,78,0	1/1:8,24:35:3.01:176,3,0	1/1:20,0:30:63.21:2219,63,0	1/1:18,0:28:30.05:945,30,0	0/0:16,0:16:45.15:0,45,1421	0/0:20,0:20:45.13:0,45,1291	0/0:25,0:25:60.15:0,60,1715	1/1:16,0:32:51.15:1523,51,0	1/1:20,0:33:63.17:1783,63,0	1/1:7,0:14:20.82:488,21,0	1/1:9,0:12:24.05:556,24,0	1/1:17,0:21:33.06:925,33,0	1/1:7,23:35:9:367,9,0	1/1:13,0:16:27.07:557,27,0	0/0:13,0:13:24.04:0,24,680	0/0:18,0:18:42.12:0,42,1323	0/0:20,0:20:42.11:0,42,1141	0/0:16,0:16:21:0,21,570	1/1:13,0:30:78.24:2426,78,0	1/1:21,0:39:69.17:2496,69,0	1/1:20,0:22:26.27:317,26,0
chr10	14071905	.	TA	T	3574.42	PASS	AB=0.691;AC=33;AF=0.589;AN=56;BaseQRankSum=-0.794;DP=422;FS=1.707;HRun=14;HaplotypeScore=49.4404;InbreedingCoeff=0.5074;MQ=65.80;MQ0=4;MQRankSum=2.301;QD=11.14;ReadPosRankSum=1.638;VQSLOD=3.3277;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:30.45:0,30,406	1/1:1,3:4:2.61:20,3,0	0/0:25,0:14:1.81:0,2,67	0/0:10,1:8:7.27:0,7,46	1/1:7,22:29:31.47:354,31,0	1/1:1,7:8:8.90:62,9,0	1/1:6,8:15:22.84:150,23,0	1/1:8,25:32:64.90:440,65,0	0/1:6,8:11:26.71:134,0,27	1/1:9,12:21:29.62:205,30,0	1/1:6,15:21:13.72:239,14,0	0/0:9,0:9:24.03:0,24,222	0/0:8,0:8:14.69:0,15,123	0/0:10,0:10:15.34:0,15,105	1/1:1,14:15:32.73:226,33,0	1/1:1,5:8:21.92:135,22,0	0/1:9,13:22:36.61:184,0,37	1/1:3,23:26:28.65:342,29,0	1/1:5,17:24:1.79:276,2,0	1/1:2,17:19:44.52:308,45,0	1/1:1,4:5:8.93:62,9,0	0/0:1,0:1:3:0,3,28	0/0:7,1:9:6.28:0,6,185	0/0:3,0:3:9.01:0,9,84	0/1:7,1:8:5.89:6,0,80	1/1:3,9:11:26.73:182,27,0	0/1:10,10:22:5.33:148,0,5	0/1:7,8:15:5.37:102,0,5
chr10	14072525	.	C	CAG	1314.47	PASS	AB=1.000;AC=24;AF=0.429;AN=56;BaseQRankSum=14.394;DP=842;FS=18.908;HRun=0;HaplotypeScore=150.2707;InbreedingCoeff=0.2865;MQ=65.89;MQ0=42;MQRankSum=-1.998;QD=2.68;ReadPosRankSum=9.257;VQSLOD=0.4877;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,102,1460	1/1:15,0:10:9.88:32,10,0	0/0:32,0:21:21.83:0,22,570	0/0:44,0:29:27.01:0,27,425	1/1:18,0:14:12.90:38,13,0	1/1:21,5:26:24.39:380,24,0	1/1:27,7:34:22.35:362,22,0	0/0:33,0:30:24.15:0,24,264	1/1:31,0:31:42.09:155,42,0	0/1:36,0:27:2.72:3,0,177	0/1:19,0:15:14.80:15,0,28	0/0:24,0:24:66.22:0,66,943	0/0:34,0:34:90.27:0,90,1266	0/0:41,0:41:99:0,114,1572	0/1:54,0:43:40.74:73,0,41	1/1:29,0:27:11.89:74,12,0	0/1:32,0:32:18.45:84,0,18	1/1:30,0:25:20.88:86,21,0	0/1:20,0:15:17.44:17,0,82	0/1:22,0:19:10.57:11,0,28	0/1:53,0:49:33.65:52,0,34	0/0:25,0:25:67.47:0,67,945	0/0:22,0:22:51.15:0,51,711	0/0:34,0:34:96.31:0,96,1350	0/0:22,0:22:57.19:0,57,816	0/1:25,0:20:38.20:38,0,85	0/1:29,0:24:49.42:49,0,65	0/1:18,0:18:16.36:41,0,16
chr10	14072527	.	GAC	G	2924.53	PASS	AB=0.930;AC=15;AF=0.268;AN=56;BaseQRankSum=-1.079;DP=834;FS=0.000;HRun=0;HaplotypeScore=142.2444;InbreedingCoeff=-0.0090;MQ=66.54;MQ0=38;MQRankSum=2.055;QD=7.58;ReadPosRankSum=-3.122;VQSLOD=2.5445;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,105,1900	0/0:12,3:10:2.49:0,2,41	0/0:35,0:26:61.77:0,62,836	0/0:40,0:28:43.72:0,44,559	0/1:19,2:17:27.17:124,0,27	1/1:16,9:25:42.86:419,43,0	1/1:22,12:34:52.92:761,53,0	0/1:30,1:28:99:696,0,125	0/0:30,0:30:37.48:0,37,251	0/1:32,3:26:99:246,0,264	0/0:16,2:14:23.03:0,23,143	0/0:22,0:22:66.22:0,66,1151	0/0:35,0:35:93.89:0,94,1613	0/0:41,0:41:99:0,123,1963	0/0:49,5:43:26.28:0,26,397	0/1:29,1:28:7.39:7,0,192	0/1:33,0:33:13.16:13,0,207	0/1:27,3:25:27.36:27,0,126	0/1:17,2:15:93.43:93,0,133	0/1:19,2:18:19.66:20,0,110	0/1:50,1:47:34.07:34,0,219	0/0:25,0:25:67.47:0,67,1156	0/0:21,0:21:51.17:0,51,864	0/0:32,0:32:96.26:0,96,1641	0/0:22,0:22:57.19:0,57,951	0/1:21,6:22:88.02:577,0,88	0/1:27,2:24:73.51:74,0,195	0/0:17,0:17:26.64:0,27,168
chr10	14072529	.	C	CAG	13161.98	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-12.824;DP=846;FS=8.019;HRun=0;HaplotypeScore=115.2137;InbreedingCoeff=0.9868;MQ=67.45;MQ0=37;MQRankSum=-1.265;QD=24.98;ReadPosRankSum=4.574;VQSLOD=5.8175;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,108,1466	1/1:3,11:9:12.04:220,12,0	0/0:36,0:27:35.91:0,36,807	0/0:41,0:30:43.25:0,43,581	1/1:3,18:17:24.08:428,24,0	1/1:20,5:25:44.95:503,45,0	1/1:26,7:33:40.64:495,41,0	1/1:5,27:30:77.86:991,78,0	1/1:1,29:30:57.20:1042,57,0	1/1:7,28:27:69.20:1115,69,0	1/1:3,14:13:17.92:330,18,0	0/0:24,0:24:66.22:0,66,938	0/0:35,0:35:96.76:0,97,1332	0/0:41,0:41:99:0,108,1495	1/1:7,47:43:71.30:1317,71,0	1/1:3,29:30:53.99:984,54,0	1/1:2,29:31:63.22:1146,63,0	1/1:4,27:26:38.19:705,38,0	1/1:6,13:16:39.13:682,39,0	1/1:5,18:20:17.10:327,17,0	1/1:5,47:48:53.95:986,54,0	0/0:26,0:26:63.68:0,64,903	0/0:21,0:21:51.17:0,51,730	0/0:34,0:34:87.27:0,87,1215	0/0:21,0:21:57.19:0,57,816	1/1:7,20:24:11.29:760,11,0	1/1:6,23:25:36.06:636,36,0	1/1:1,15:17:27.09:495,27,0
chr10	14074083	.	G	GA	8095.35	PASS	AB=0.935;AC=38;AF=0.679;AN=56;BaseQRankSum=-9.518;DP=438;FS=2.066;HRun=8;HaplotypeScore=50.0978;InbreedingCoeff=0.7820;MQ=77.94;MQ0=3;MQRankSum=-0.698;QD=24.17;ReadPosRankSum=-1.516;VQSLOD=4.8305;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:94.24:0,94,841	1/1:0,7:7:21.06:242,21,0	0/1:20,0:16:12.53:13,0,65	0/1:19,2:13:25.25:25,0,62	1/1:4,21:25:63.18:722,63,0	1/1:1,13:14:8.65:354,9,0	1/1:1,4:5:12.04:138,12,0	1/1:4,47:51:99:1495,132,0	1/1:0,16:16:45.13:519,45,0	1/1:5,10:15:30.09:346,30,0	1/1:3,13:16:39.11:445,39,0	0/0:10,0:10:30.02:0,30,274	0/0:12,0:12:30.01:0,30,274	0/0:10,0:10:27.01:0,27,247	1/1:3,13:16:27.55:312,28,0	1/1:1,11:12:30.09:346,30,0	1/1:1,21:22:45.13:519,45,0	1/1:3,6:9:18.05:205,18,0	1/1:4,19:23:57.06:640,57,0	1/1:1,19:20:54.13:608,54,0	1/1:2,3:5:9.03:104,9,0	0/0:2,0:2:3:0,3,27	0/0:8,0:8:21.01:0,21,192	0/0:9,0:9:27.01:0,27,247	0/0:16,0:16:36.01:0,36,330	1/1:0,14:14:42.10:473,42,0	1/1:2,14:16:39.12:450,39,0	1/1:0,6:6:11.93:138,12,0
chr10	14079311	.	G	GGGGC	1320.97	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-2.024;DP=544;FS=9.242;HRun=0;HaplotypeScore=119.9463;InbreedingCoeff=0.9893;MQ=85.36;MQ0=0;MQRankSum=-5.287;QD=37.74;ReadPosRankSum=-1.361;VQSLOD=3.3558;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:66.19:0,66,1150	0/0:9,0:9:27.08:0,27,462	0/0:25,0:24:45.74:0,46,921	0/0:22,0:22:57.16:0,57,979	0/0:16,0:16:48.10:0,48,835	1/1:2,7:9:15.05:388,15,0	1/1:5,20:26:42.13:1051,42,0	0/0:23,0:23:54.15:0,54,889	0/0:18,0:18:54.17:0,54,994	0/0:12,0:12:32.85:0,33,581	0/0:17,0:17:51.12:0,51,795	0/0:16,0:16:45.15:0,45,854	0/0:23,0:23:69.21:0,69,1247	0/0:18,0:18:54.19:0,54,1010	0/0:28,0:28:72.13:0,72,1291	0/0:26,0:26:72.24:0,72,1338	0/0:21,0:21:63.15:0,63,1110	0/0:27,0:27:78.21:0,78,1345	0/0:16,0:16:39.12:0,39,696	0/0:14,0:14:39.10:0,39,645	0/0:33,0:33:90.31:0,90,1671	0/0:17,0:17:45.15:0,45,842	0/0:8,0:8:24.07:0,24,421	0/0:33,0:33:90.31:0,90,1708	0/0:12,0:12:33.09:0,33,538	0/0:17,0:17:45.14:0,45,819	0/0:20,0:20:57.20:0,57,1073	0/0:10,0:10:26.93:0,27,485
chr10	14084651	.	TG	T	1780.65	PASS	AB=0.741;AC=18;AF=0.321;AN=56;BaseQRankSum=15.029;DP=586;FS=3.370;HRun=2;HaplotypeScore=114.5643;InbreedingCoeff=-0.4510;MQ=61.64;MQ0=2;MQRankSum=-10.700;QD=4.81;ReadPosRankSum=0.811;VQSLOD=0.7073;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,2:32:45.21:0,45,1017	0/1:3,5:8:6.77:85,0,7	0/0:25,0:16:22.17:0,22,501	0/0:30,0:24:45.81:0,46,731	0/1:20,11:31:53.37:53,0,219	0/1:5,7:12:40.57:74,0,41	0/1:8,4:12:61.76:62,0,87	0/1:32,0:32:15.36:15,0,287	0/1:16,10:26:99:135,0,131	0/1:16,8:24:88.13:148,0,88	0/1:6,7:13:40.19:101,0,40	0/0:18,0:18:54.17:0,54,790	0/0:25,0:25:75.24:0,75,1097	0/0:21,0:21:63.19:0,63,904	0/1:16,13:29:74.14:242,0,74	0/1:11,13:24:70.17:185,0,70	0/1:20,7:27:99:124,0,187	0/1:16,6:22:95.70:96,0,146	0/1:14,3:17:26.85:27,0,152	0/1:9,12:21:34:201,0,34	0/1:11,1:12:24.11:24,0,98	0/0:9,0:9:27.06:0,27,361	0/0:18,0:18:54.13:0,54,777	0/0:19,1:20:54.67:0,55,824	0/0:18,0:18:47.14:0,47,758	0/1:14,9:23:68.31:206,0,68	0/1:17,12:29:99:136,0,158	0/1:5,3:8:28.66:29,0,63
chr10	14084654	.	TTTTG	T	4272.24	PASS	AB=0.732;AC=17;AF=0.304;AN=56;BaseQRankSum=16.672;DP=585;FS=0.344;HRun=0;HaplotypeScore=139.8332;InbreedingCoeff=-0.4048;MQ=58.71;MQ0=2;MQRankSum=-12.259;QD=12.53;ReadPosRankSum=3.927;VQSLOD=4.3721;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:74.93:0,75,1581	0/1:2,5:7:5.24:152,0,5	0/0:22,0:14:30.50:0,31,327	0/0:27,0:21:45.28:0,45,470	0/1:19,11:30:99:181,0,179	0/1:6,7:13:26.75:212,0,27	0/1:8,4:12:72.18:153,0,72	0/0:32,0:32:65.08:0,65,285	0/1:16,10:26:92.13:354,0,92	0/1:15,8:23:68.66:262,0,69	0/1:6,7:13:29.42:241,0,29	0/0:19,0:19:54.17:0,54,978	0/0:26,0:26:75.24:0,75,1576	0/0:21,0:21:60.20:0,60,1305	0/1:17,13:30:52.55:463,0,53	0/1:11,13:24:47.81:378,0,48	0/1:20,6:26:99:243,0,191	0/1:19,5:24:99:158,0,174	0/1:14,3:17:95.25:95,0,144	0/1:10,12:22:20.42:460,0,20	0/1:10,1:11:51.10:51,0,81	0/0:8,0:8:18.05:0,18,332	0/0:18,0:18:54.18:0,54,1185	0/0:21,0:21:60.10:0,60,1300	0/0:20,0:20:60.20:0,60,1325	0/1:13,9:22:55.36:374,0,55	0/1:17,12:29:99:372,0,127	0/1:9,3:12:46.29:123,0,46
chr10	14085230	.	A	AT	3824.13	PASS	AB=0.795;AC=31;AF=0.554;AN=56;BaseQRankSum=-5.526;DP=385;FS=0.491;HRun=10;HaplotypeScore=45.8543;InbreedingCoeff=0.6434;MQ=70.50;MQ0=7;MQRankSum=-1.984;QD=16.34;ReadPosRankSum=-0.378;VQSLOD=3.3683;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:38:67.11:0,67,545	1/1:0,3:3:9.02:96,9,0	0/0:26,0:9:2.51:0,3,42	0/1:22,0:11:12.42:12,0,14	1/1:4,7:13:20.72:188,21,0	0/0:10,0:10:23.65:0,24,183	0/0:13,0:13:22.99:0,23,178	1/1:12,15:27:54.12:563,54,0	0/1:3,2:5:17.19:26,0,17	1/1:4,6:10:18.05:192,18,0	1/1:4,13:17:36.05:371,36,0	0/0:9,1:10:23.96:0,24,197	0/0:6,0:6:14.98:0,15,123	0/0:7,0:7:20.97:0,21,172	1/1:5,6:11:0.25:171,0,0	1/1:3,6:9:12.01:128,12,0	1/1:8,27:33:41.78:674,42,0	1/1:7,10:15:24.06:256,24,0	0/1:3,8:10:3.58:171,0,4	1/1:1,4:5:9.02:96,9,0	1/1:2,4:5:9.02:96,9,0	0/1:2,0:2:0:0,0,0	0/0:8,0:8:8.99:0,9,74	0/0:13,0:12:30.58:0,31,227	0/0:18,0:18:41.93:0,42,344	0/1:9,8:14:0.59:200,0,1	1/1:1,6:7:18.05:192,18,0	1/1:3,13:16:17.46:391,17,0
chr10	14085892	.	T	TA	11827.26	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=13.071;DP=570;FS=4.385;HRun=0;HaplotypeScore=84.8363;InbreedingCoeff=0.9956;MQ=55.96;MQ0=5;MQRankSum=0.163;QD=28.29;ReadPosRankSum=1.895;VQSLOD=5.1939;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:75.24:0,75,1031	1/1:2,6:8:21.03:231,21,0	0/0:7,0:5:15.05:0,15,207	0/0:15,0:9:24.07:0,24,316	1/1:2,36:38:99:1244,108,0	1/1:1,15:16:36.11:417,36,0	1/1:0,16:16:36.10:413,36,0	1/1:7,26:31:75.46:899,75,0	1/1:1,14:15:40:446,40,0	1/1:2,32:33:89.71:1057,90,0	1/1:7,20:27:57.16:658,57,0	0/0:23,0:23:60.16:0,60,817	0/0:11,0:11:30.10:0,30,419	0/0:23,0:23:69.13:0,69,904	1/1:1,13:14:39.07:454,39,0	1/1:5,11:16:36.08:414,36,0	1/1:2,16:17:42.12:481,42,0	1/1:6,24:30:66.93:747,67,0	1/1:10,21:31:46.96:802,47,0	1/1:4,24:27:60.18:701,60,0	1/1:1,15:15:39.11:451,39,0	0/0:8,0:8:24.08:0,24,336	0/0:17,0:17:51.16:0,51,697	0/0:9,0:9:21.07:0,21,294	0/0:11,0:11:33.10:0,33,445	1/1:2,25:27:71.53:841,72,0	1/1:4,30:34:95.64:1084,96,0	1/1:0,17:17:42.12:486,42,0
chr10	14086780	.	C	CTTTT	15259.48	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-5.492;DP=572;FS=5.656;HRun=10;HaplotypeScore=100.8053;InbreedingCoeff=0.9693;MQ=72.99;MQ0=1;MQRankSum=-5.330;QD=40.80;ReadPosRankSum=-4.783;VQSLOD=3.0106;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:42:99:0,100,1382	1/1:2,7:10:24.08:468,24,0	0/0:22,0:22:34.31:0,34,439	0/0:9,0:10:13.91:0,14,132	1/1:11,22:41:95.40:1679,95,0	1/1:5,15:24:48.16:977,48,0	1/1:6,8:16:27.09:604,27,0	1/1:9,6:11:12.04:258,12,0	1/1:5,14:20:45.15:1045,45,0	1/1:10,16:31:67.92:1318,68,0	1/1:6,13:25:60.07:1087,60,0	0/0:20,0:20:54.15:0,54,764	0/0:25,0:25:69.20:0,69,975	0/0:24,0:26:67.03:0,67,936	1/1:3,17:22:48.16:1048,48,0	1/1:2,7:10:15.05:350,15,0	1/1:6,15:22:39.13:881,39,0	1/1:5,16:26:46.40:946,46,0	1/1:6,9:18:39.03:665,39,0	1/1:4,15:22:60.20:1152,60,0	1/1:5,1:8:5.98:90,6,0	0/0:13,0:13:39.13:0,39,552	0/0:18,0:18:54.18:0,54,763	0/0:6,0:6:15.04:0,15,211	0/0:13,0:13:39.13:0,39,550	1/1:12,24:38:81.18:1609,81,0	1/1:1,11:14:36.04:794,36,0	1/1:2,3:7:15.05:286,15,0
chr10	14087524	.	GAAA	G	4683.18	PASS	AB=0.706;AC=33;AF=0.589;AN=56;BaseQRankSum=1.392;DP=547;FS=6.227;HRun=15;HaplotypeScore=86.2100;InbreedingCoeff=0.7669;MQ=71.41;MQ0=8;MQRankSum=1.010;QD=13.86;ReadPosRankSum=4.872;VQSLOD=3.1015;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:26:59.23:0,59,819	1/1:2,3:5:7.50:98,8,0	0/0:41,0:19:10.90:0,11,230	0/1:37,0:15:2.54:3,0,48	1/1:7,18:26:35.79:426,36,0	0/0:2,0:14:12.46:0,12,28	0/1:3,1:17:15.18:15,0,32	1/1:10,4:15:17.81:160,18,0	1/1:1,8:8:11.91:118,12,0	1/1:7,10:19:31.38:316,31,0	1/1:13,11:25:25.43:278,25,0	0/0:21,0:22:48.30:0,48,622	0/0:9,0:11:30.05:0,30,394	0/0:11,0:12:31.30:0,31,453	1/1:8,13:20:29.94:322,30,0	1/1:4,8:11:18.02:201,18,0	1/1:4,16:21:37.48:429,37,0	1/1:8,20:29:49.54:533,50,0	1/1:6,4:14:19.28:200,19,0	0/1:7,7:18:7.85:173,0,8	1/1:8,5:15:20.79:203,21,0	0/0:17,0:17:36.08:0,36,538	0/0:19,1:21:3.91:0,4,512	0/0:19,0:20:48.13:0,48,808	0/0:24,0:24:54.16:0,54,862	1/1:4,12:16:25.40:385,25,0	1/1:2,19:21:42.05:469,42,0	1/1:1,12:13:30.64:352,31,0
chr10	14089630	.	G	GT	1417.83	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-2.647;DP=672;FS=4.989;HRun=5;HaplotypeScore=78.0162;InbreedingCoeff=0.9917;MQ=84.67;MQ0=0;MQRankSum=-0.800;QD=29.54;ReadPosRankSum=1.116;VQSLOD=4.2683;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:81.20:0,81,870	0/0:14,0:14:36.09:0,36,387	0/0:20,0:20:45.11:0,45,481	0/0:20,0:20:42.11:0,42,522	0/0:34,0:34:90.22:0,90,967	1/1:1,26:27:69.22:908,69,0	1/1:2,19:21:48.16:632,48,0	0/0:35,0:35:90.19:0,90,942	0/0:28,0:28:58.36:0,58,757	0/0:31,0:31:87.21:0,87,924	0/0:21,0:21:57.13:0,57,603	0/0:22,0:22:57.13:0,57,606	0/0:22,0:22:60.15:0,60,645	0/0:22,0:22:63.14:0,63,668	0/0:31,0:31:84.18:0,84,886	0/0:32,0:32:90.19:0,90,950	0/0:34,0:34:96.24:0,96,1031	0/0:23,0:23:66.10:0,66,686	0/0:14,0:14:42.09:0,42,438	0/0:23,0:23:60.14:0,60,633	0/0:27,0:27:78.14:0,78,812	0/0:17,0:17:48.12:0,48,516	0/0:16,0:16:45.11:0,45,484	0/0:27,0:27:75.12:0,75,783	0/0:23,0:22:63.15:0,63,671	0/0:24,0:24:69.17:0,69,741	0/0:29,0:29:81.18:0,81,859	0/0:5,0:5:15.04:0,15,161
chr10	14090339	.	GGGGT	G	19545.76	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=12.942;DP=649;FS=2.641;HRun=0;HaplotypeScore=125.3021;InbreedingCoeff=0.9999;MQ=72.91;MQ0=0;MQRankSum=-4.379;QD=46.10;ReadPosRankSum=2.146;VQSLOD=5.6768;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,99,2365	1/1:1,13:14:36.12:656,36,0	0/0:18,0:18:48.16:0,48,1125	0/0:17,0:17:48.16:0,48,1126	1/1:1,17:18:45.11:748,45,0	1/1:0,30:30:81.28:1497,81,0	1/1:3,29:32:78.27:1455,78,0	1/1:2,29:31:87.20:1475,87,0	1/1:2,17:19:45.15:835,45,0	1/1:3,19:22:54.14:904,54,0	1/1:1,14:15:36.12:651,36,0	0/0:24,0:24:69.24:0,69,1740	0/0:28,0:28:81.28:0,81,2065	0/0:31,0:31:87.29:0,87,2164	1/1:2,26:28:69.24:1282,69,0	1/1:4,25:28:63.14:1092,63,0	1/1:1,20:21:48.59:843,49,0	1/1:0,19:19:57.20:1067,57,0	1/1:0,28:28:84.24:1534,84,0	1/1:3,19:22:57.15:1015,57,0	1/1:1,36:37:84.24:1536,84,0	0/0:20,0:20:54.16:0,54,1308	0/0:13,0:13:39.12:0,39,944	0/0:24,0:24:66.22:0,66,1693	0/0:15,0:15:39.13:0,39,984	1/1:0,27:27:81.24:1440,81,0	1/1:1,15:16:39.13:729,39,0	1/1:0,16:16:42.14:786,42,0
chr10	14091930	.	A	ATTTC	7588.67	PASS	AB=0.955;AC=35;AF=0.625;AN=56;BaseQRankSum=0.916;DP=616;FS=19.741;HRun=0;HaplotypeScore=136.7251;InbreedingCoeff=0.8953;MQ=62.07;MQ0=11;MQRankSum=-6.823;QD=19.92;ReadPosRankSum=-2.503;VQSLOD=2.6812;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:37:74.85:0,75,981	1/1:0,4:6:6.02:136,6,0	0/0:29,0:13:13.85:0,14,201	0/0:21,0:11:9.04:0,9,123	1/1:5,8:13:25.79:325,26,0	1/1:28,0:28:18.07:177,18,0	1/1:27,0:26:34.39:249,34,0	1/1:6,19:26:59.93:813,60,0	0/1:20,1:18:6.85:238,0,7	1/1:28,6:32:65.84:815,66,0	1/1:9,8:19:23.93:364,24,0	0/0:21,0:21:41.97:0,42,561	0/0:15,0:20:26.87:0,27,377	0/0:26,0:29:63.04:0,63,811	1/1:7,18:26:39.12:750,39,0	1/1:14,16:32:29.63:463,30,0	1/1:13,1:14:24.03:337,24,0	1/1:2,8:13:24.08:438,24,0	1/1:17,4:20:50.95:724,51,0	1/1:7,3:20:29.94:470,30,0	1/1:7,10:18:13.16:121,13,0	0/0:14,0:16:27.05:0,27,361	0/0:15,0:15:32.95:0,33,428	0/0:22,0:26:61.91:0,62,784	0/0:18,0:19:36.87:0,37,502	1/1:7,16:24:37.45:479,37,0	1/1:10,10:24:30.10:559,30,0	1/1:6,1:7:9.01:131,9,0
chr10	14091931	.	T	TTTC	6109.01	PASS	AB=0.852;AC=31;AF=0.554;AN=56;BaseQRankSum=2.014;DP=624;FS=60.372;HRun=0;HaplotypeScore=132.2456;InbreedingCoeff=0.5926;MQ=62.07;MQ0=11;MQRankSum=-6.724;QD=15.83;ReadPosRankSum=1.919;VQSLOD=2.4701;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:87.04:0,87,948	1/1:6,0:6:5.95:88,6,0	0/0:29,0:12:11.15:0,11,191	0/0:24,0:12:8.04:0,8,152	1/1:13,0:13:27.94:268,28,0	0/1:29,0:28:7.04:211,0,7	1/1:26,1:25:33.84:325,34,0	1/1:24,1:25:20.87:614,21,0	0/1:11,10:19:7.69:161,0,8	1/1:33,3:34:65.22:719,65,0	0/1:21,0:21:11.19:213,0,11	0/0:21,0:21:51.47:0,51,599	0/0:20,0:20:32.90:0,33,384	0/0:30,0:29:68.34:0,68,809	1/1:24,3:26:23.41:561,23,0	1/1:32,1:32:13.67:363,14,0	1/1:7,8:14:4.90:296,5,0	1/1:13,0:13:23.85:286,24,0	1/1:9,11:20:50.18:627,50,0	1/1:17,1:18:10.54:404,11,0	0/1:16,3:18:10.98:88,0,11	0/0:16,0:16:35.98:0,36,394	0/0:14,0:14:33.94:0,34,402	0/0:26,0:26:65.49:0,65,734	0/0:20,0:20:46.06:0,46,519	1/1:29,0:27:1.72:348,2,0	1/1:21,3:24:24.43:448,24,0	0/1:5,2:8:9.62:91,0,10
chr10	14091932	.	T	TTC	4337.19	PASS	AB=0.954;AC=24;AF=0.429;AN=56;BaseQRankSum=1.521;DP=628;FS=140.873;HRun=0;HaplotypeScore=125.1979;InbreedingCoeff=0.1252;MQ=61.99;MQ0=11;MQRankSum=-4.945;QD=11.18;ReadPosRankSum=6.461;VQSLOD=2.1717;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:96.79:0,97,929	1/1:6,0:6:5.80:60,6,0	0/0:31,0:13:2.57:0,3,167	0/0:23,0:11:14.06:0,14,156	0/1:13,0:13:40.01:153,0,40	0/1:8,20:28:1.94:379,0,2	1/1:8,19:25:34.11:501,34,0	1/1:25,0:25:0.37:440,0,0	0/1:21,1:19:15.10:87,0,15	0/1:36,1:35:41:482,0,41	0/1:21,0:21:78.16:108,0,78	0/0:21,0:21:60.85:0,61,638	0/0:20,0:20:32.92:0,33,360	0/0:30,0:29:74.54:0,75,787	0/1:27,0:26:1.06:315,0,1	0/1:29,2:30:35.22:245,0,35	0/1:14,0:13:2.10:155,0,2	1/1:13,0:13:17.66:163,18,0	1/1:19,0:18:34.68:414,35,0	1/1:20,0:20:5.45:254,5,0	0/1:19,0:18:51.27:63,0,51	0/0:15,0:15:38.97:0,39,399	0/0:14,0:14:40.81:0,41,420	0/0:26,0:26:67:0,67,683	0/0:22,0:22:53.04:0,53,551	0/1:30,0:28:58.10:235,0,58	0/1:25,0:25:27.48:239,0,27	0/1:10,0:10:42.75:43,0,58
chr10	14091933	.	T	TC	1933.93	PASS	AB=0.988;AC=20;AF=0.357;AN=56;BaseQRankSum=8.188;DP=624;FS=138.589;HRun=0;HaplotypeScore=98.9645;InbreedingCoeff=-0.2663;MQ=63.45;MQ0=13;MQRankSum=-4.036;QD=5.14;ReadPosRankSum=8.356;VQSLOD=0.9797;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,102,904	0/1:6,0:6:13.98:23,0,14	0/0:37,0:15:2.48:0,2,144	0/0:26,0:11:0.95:0,1,125	0/1:13,0:13:66.62:91,0,67	0/1:26,1:26:39.49:159,0,39	1/1:25,1:24:21.19:204,21,0	0/1:23,0:23:32.73:306,0,33	0/1:19,0:16:30.87:31,0,64	0/1:35,1:34:99:284,0,136	0/1:20,1:21:44.26:44,0,131	0/0:21,0:21:61.57:0,62,618	0/0:19,0:19:36:0,36,355	0/0:31,0:30:78.65:0,79,769	0/1:26,1:26:12.31:146,0,12	0/1:31,0:30:64.79:85,0,65	0/1:14,0:13:16.28:71,0,16	0/1:12,0:12:39.82:40,0,50	1/1:18,0:17:10.14:232,10,0	0/1:19,1:20:12.14:132,0,12	0/1:18,0:17:7.74:8,0,94	0/0:15,0:15:40.85:0,41,393	0/0:14,0:14:41.96:0,42,417	0/0:25,0:25:65.85:0,66,631	0/0:22,0:22:58.08:0,58,563	0/1:30,0:28:99:131,0,166	0/1:25,0:25:49.97:102,0,50	0/1:10,0:10:11.63:12,0,92
chr10	14095165	.	TG	T	11876.99	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=13.865;DP=622;FS=2.085;HRun=1;HaplotypeScore=63.4754;InbreedingCoeff=0.9998;MQ=80.09;MQ0=0;MQRankSum=-0.014;QD=37.12;ReadPosRankSum=1.185;VQSLOD=5.3594;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,153,2194	1/1:0,10:10:27.09:377,27,0	0/0:14,0:14:38.93:0,39,514	0/0:16,0:16:38.20:0,38,525	1/1:0,22:22:63.12:820,63,0	0/0:27,0:27:81.24:0,81,1142	0/0:14,0:14:42.11:0,42,575	1/1:0,26:26:78.19:1003,78,0	1/1:0,17:17:45.15:629,45,0	1/1:0,18:18:54.13:712,54,0	1/1:0,20:20:60.16:815,60,0	0/0:23,0:23:69.20:0,69,967	0/0:24,0:24:69.23:0,69,1009	0/0:32,0:32:96.29:0,96,1351	1/1:0,13:13:36.12:503,36,0	1/1:0,19:19:48.16:671,48,0	1/1:0,20:20:45.15:627,45,0	1/1:0,25:25:63.21:880,63,0	1/1:0,25:25:72.20:940,72,0	1/1:0,29:29:87.18:1151,87,0	1/1:0,15:15:36.12:503,36,0	0/0:19,0:19:54.16:0,54,752	0/0:20,0:20:60.11:0,60,808	0/0:23,0:22:66.17:0,66,903	0/0:38,0:38:99:0,114,1647	1/1:0,25:25:75.20:995,75,0	1/1:1,18:19:45.10:623,45,0	1/1:0,17:17:45.15:629,45,0
chr10	14097111	.	A	AT	4725.07	PASS	AB=0.684;AC=29;AF=0.518;AN=56;BaseQRankSum=-9.066;DP=450;FS=4.579;HRun=12;HaplotypeScore=50.2889;InbreedingCoeff=0.5762;MQ=74.63;MQ0=4;MQRankSum=-0.469;QD=16.76;ReadPosRankSum=0.009;VQSLOD=5.8256;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,1:24:15.20:0,15,246	1/1:0,4:5:8.85:73,9,0	0/0:23,0:17:1.65:0,2,82	0/0:13,0:7:3.34:0,3,18	1/1:3,19:22:53.97:504,54,0	0/0:5,0:15:20.36:0,20,59	0/0:1,0:14:16.29:0,16,47	1/1:9,14:24:45.18:396,45,0	1/1:4,9:12:29.88:274,30,0	1/1:5,18:23:35.18:502,35,0	0/1:6,6:13:8.36:186,0,8	0/0:7,0:7:11.92:0,12,87	0/1:10,1:10:5.36:5,0,127	0/0:10,0:10:23.81:0,24,175	1/1:7,7:14:18.03:175,18,0	0/1:4,10:15:11.60:254,0,12	1/1:8,16:22:27.54:391,28,0	1/1:2,17:19:42.07:409,42,0	1/1:10,16:26:10.32:420,10,0	0/1:8,7:15:10.94:211,0,11	0/1:2,4:6:6.88:102,0,7	0/0:14,0:14:29.82:0,30,219	0/0:10,0:10:23.84:0,24,175	0/0:15,0:15:24.75:0,25,249	0/0:21,1:23:26.53:0,27,348	1/1:7,11:19:0.97:293,1,0	1/1:3,15:19:26.18:415,26,0	1/1:5,4:9:12.02:117,12,0
chr10	14097243	.	AACACAC	A	3383.35	PASS	AB=0.900;AC=40;AF=0.909;AN=44;BaseQRankSum=-0.539;DP=406;FS=0.000;HRun=0;HaplotypeScore=99.7970;InbreedingCoeff=0.0499;MQ=60.45;MQ0=19;MQRankSum=-0.677;QD=10.78;ReadPosRankSum=0.792;VQSLOD=2.2693;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:17,3:21:8.24:127,8,0	./.	./.	./.	1/1:8,3:11:2.84:9,3,0	1/1:9,1:14:6.03:66,6,0	0/1:21,0:23:3.34:3,0,15	./.	0/1:6,2:8:27.76:150,0,28	1/1:12,5:17:12.04:201,12,0	1/1:11,1:8:3.01:59,3,0	1/1:14,6:19:12.93:243,13,0	1/1:8,0:7:3.01:48,3,0	1/1:5,5:11:15.05:283,15,0	1/1:10,1:14:6.02:102,6,0	1/1:7,8:16:23.99:435,24,0	1/1:12,7:18:12.04:241,12,0	./.	./.	1/1:6,4:9:8.98:140,9,0	0/1:18,0:15:0:0,0,0	1/1:7,1:9:9.02:130,9,0	1/1:6,2:8:3.01:60,3,0	1/1:17,5:22:5.75:120,6,0	1/1:6,2:8:9.03:157,9,0	0/1:11,0:12:35.82:36,0,38	1/1:13,7:22:33.99:547,34,0	1/1:2,3:5:12.04:223,12,0
chr10	14098835	.	AG	A	10638.69	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=18.324;DP=534;FS=1.059;HRun=4;HaplotypeScore=163.8246;InbreedingCoeff=0.9886;MQ=83.28;MQ0=0;MQRankSum=-17.821;QD=31.85;ReadPosRankSum=0.243;VQSLOD=3.0567;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:51.16:0,51,697	1/1:2,5:7:18.03:194,18,0	0/0:26,0:26:69.07:0,69,881	0/0:18,0:18:46.38:0,46,587	1/1:2,21:23:66.11:704,66,0	1/1:0,30:30:90.19:1014,90,0	1/1:0,8:8:24.07:273,24,0	1/1:5,17:22:60.15:669,60,0	1/1:2,12:14:39.11:444,39,0	1/1:3,14:17:48.13:547,48,0	1/1:3,13:16:39.11:435,39,0	0/0:26,0:26:75.25:0,75,1048	0/0:24,0:24:72.24:0,72,1008	0/0:21,0:21:63.19:0,63,862	1/1:5,25:30:87.22:963,87,0	1/1:5,9:14:39.08:420,39,0	1/1:2,16:17:51.08:560,51,0	1/1:1,8:9:21.02:228,21,0	1/1:0,20:20:60.16:680,60,0	1/1:0,38:38:99:1260,111,0	1/1:1,4:5:9.03:104,9,0	0/0:21,0:21:63.21:0,63,871	0/0:23,0:23:66.22:0,66,924	0/0:8,0:8:24.08:0,24,335	0/0:16,0:16:48.16:0,48,672	1/1:2,26:28:84.24:963,84,0	1/1:0,27:27:81.23:919,81,0	1/1:1,7:8:24.05:264,24,0
chr10	14098843	.	CTA	C	12807.85	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=18.384;DP=540;FS=1.903;HRun=0;HaplotypeScore=172.2960;InbreedingCoeff=0.9803;MQ=80.02;MQ0=0;MQRankSum=-17.461;QD=38.35;ReadPosRankSum=0.376;VQSLOD=5.6616;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:51.06:0,51,882	1/1:1,4:5:12.01:150,12,0	0/0:25,0:25:63.10:0,63,1018	0/0:18,0:18:41.07:0,41,717	1/1:3,20:23:57.01:725,57,0	1/1:2,31:33:90.19:1247,90,0	1/1:1,7:8:21.07:302,21,0	1/1:3,17:20:57.18:801,57,0	1/1:1,13:14:42.13:590,42,0	1/1:2,16:18:48.16:684,48,0	1/1:1,14:15:44.98:587,45,0	0/0:27,0:27:78.27:0,78,1455	0/0:26,0:26:78.24:0,78,1391	0/0:21,0:21:60.19:0,60,1086	1/1:1,26:27:81.27:1166,81,0	1/1:3,8:11:27.08:359,27,0	1/1:1,19:20:54.17:755,54,0	1/1:3,4:7:9.03:131,9,0	1/1:2,19:21:57.19:822,57,0	1/1:3,39:42:99:1594,114,0	1/1:0,5:5:11.73:143,12,0	0/0:22,0:22:63.22:0,63,1180	0/0:23,0:23:66.23:0,66,1222	0/0:7,0:7:21.07:0,21,393	0/0:18,0:18:54.19:0,54,1004	1/1:1,27:28:81.27:1183,81,0	1/1:2,27:29:87.22:1222,87,0	1/1:0,8:8:24.08:346,24,0
chr10	14099450	.	CTG	C	1756.23	PASS	AB=0.834;AC=9;AF=0.161;AN=56;BaseQRankSum=10.229;DP=900;FS=14.837;HRun=0;HaplotypeScore=258.4375;InbreedingCoeff=-0.2030;MQ=48.11;MQ0=10;MQRankSum=-10.000;QD=6.21;ReadPosRankSum=-5.749;VQSLOD=0.6512;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,104,1988	0/0:20,4:24:42.11:0,42,690	0/0:19,2:15:8.59:0,9,511	0/0:34,0:28:72.05:0,72,998	0/0:32,4:36:39.10:0,39,679	0/0:20,3:23:25.14:0,25,542	0/1:13,4:17:23.45:23,0,264	0/1:40,22:57:99:460,0,1757	0/0:18,6:24:7.03:0,7,121	0/1:23,14:37:99:552,0,888	0/0:27,6:33:17.75:0,18,633	0/0:36,0:36:90.49:0,90,1668	0/0:41,0:41:99:0,105,1929	0/0:19,0:19:54.18:0,54,1012	0/0:45,9:53:51.17:0,51,898	0/0:42,5:47:5.80:0,6,1182	0/1:20,1:21:9.33:9,0,448	0/1:21,3:24:80.27:80,0,650	0/1:18,3:17:94.51:95,0,491	0/0:34,10:44:49.95:0,50,885	0/0:13,2:14:12.04:0,12,215	0/0:36,0:35:90.65:0,91,1788	0/0:25,0:25:63.19:0,63,1089	0/0:25,0:25:54.19:0,54,1042	0/0:31,0:30:71.03:0,71,1192	0/1:33,15:47:99:603,0,1148	0/1:30,6:36:54.88:55,0,979	0/1:15,2:17:18.26:18,0,643
chr10	14099480	.	G	GTC	1054.98	PASS	AB=0.990;AC=17;AF=0.304;AN=56;BaseQRankSum=9.835;DP=924;FS=20.129;HRun=0;HaplotypeScore=312.0517;InbreedingCoeff=-0.3161;MQ=51.74;MQ0=12;MQRankSum=-7.858;QD=2.06;ReadPosRankSum=-0.739;VQSLOD=0.9532;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:76.73:0,77,1327	0/1:16,1:17:26.27:71,0,26	0/0:27,0:16:41.34:0,41,545	0/0:38,0:26:65.75:0,66,893	1/1:34,1:34:3.24:73,3,0	0/1:26,0:26:22.89:23,0,129	0/1:24,0:22:34.33:34,0,79	0/0:55,0:50:99:0,113,1225	0/1:29,0:29:24.64:25,0,31	0/1:46,0:46:99:226,0,1017	0/1:29,1:29:32.34:32,0,213	0/0:36,0:36:96.30:0,96,1338	0/0:38,0:38:90.27:0,90,1241	0/0:23,0:23:54.18:0,54,772	0/1:53,0:52:12:12,0,389	0/1:44,0:44:99:99,0,400	0/1:25,0:26:37.62:38,0,252	0/1:26,0:26:23.46:23,0,363	0/1:18,0:18:10.35:10,0,391	0/1:39,0:39:31.32:31,0,153	0/0:15,0:16:3.01:0,3,43	0/0:43,0:43:99:0,129,1751	0/0:31,0:31:14.16:0,14,526	0/0:25,0:25:43.96:0,44,606	0/0:30,0:29:68.26:0,68,947	0/1:46,0:45:99:184,0,751	0/1:36,1:37:99:128,0,471	0/1:16,0:16:24.85:203,0,25
chr10	14099486	.	CTTA	C	5666.80	PASS	AB=0.969;AC=22;AF=0.393;AN=56;BaseQRankSum=6.672;DP=870;FS=3.679;HRun=0;HaplotypeScore=278.0069;InbreedingCoeff=-0.0406;MQ=53.16;MQ0=10;MQRankSum=-12.724;QD=10.44;ReadPosRankSum=-0.333;VQSLOD=4.0386;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:46:88.77:0,89,1450	0/1:14,0:14:11.29:100,0,11	0/0:23,0:16:38.45:0,38,487	0/0:36,0:26:56.88:0,57,729	0/1:35,0:35:14.56:15,0,39	0/1:15,0:22:61.96:62,0,94	0/1:3,0:19:12.87:79,0,13	1/1:50,0:45:85.66:1571,86,0	0/1:28,0:28:16.74:39,0,17	0/1:51,0:51:99:755,0,362	0/1:28,0:27:8.46:8,0,115	0/0:36,0:36:90.29:0,90,1462	0/0:36,0:36:84.28:0,84,1329	0/0:24,0:24:54.15:0,54,792	0/1:50,0:50:1.21:1,0,236	0/1:39,0:39:99:128,0,241	0/1:26,0:26:54.85:55,0,162	0/1:23,0:23:99:242,0,145	1/1:5,10:16:45.11:670,45,0	1/1:13,17:30:13.80:255,14,0	1/1:5,11:16:2.13:52,2,0	0/0:41,0:41:99:0,120,2150	0/0:31,0:31:50.85:0,51,644	0/0:23,0:23:44.97:0,45,589	0/0:29,0:29:55.90:0,56,935	0/1:43,0:42:99:945,0,235	0/1:34,0:34:99:323,0,211	0/1:14,0:15:46.18:366,0,46
chr10	14099487	.	T	TC	11893.74	PASS	AB=0.616;AC=36;AF=0.643;AN=56;BaseQRankSum=5.341;DP=876;FS=14.484;HRun=1;HaplotypeScore=236.4288;InbreedingCoeff=0.7639;MQ=53.62;MQ0=9;MQRankSum=-8.690;QD=20.72;ReadPosRankSum=-0.309;VQSLOD=1.9696;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:46:55.63:0,56,717	1/1:0,12:12:5.97:93,6,0	0/0:24,0:16:35.03:0,35,470	0/0:31,0:24:56.67:0,57,729	1/1:1,16:34:13.69:78,14,0	0/1:8,3:23:16.44:85,0,16	1/1:18,3:19:0.97:86,1,0	1/1:5,42:42:99:1821,120,0	1/1:0,17:31:5.71:94,6,0	1/1:1,51:52:99:2316,150,0	1/1:0,27:26:17.99:288,18,0	0/0:21,1:39:64.43:0,64,827	0/0:24,0:37:68.47:0,68,891	0/0:11,0:25:31.31:0,31,341	1/1:5,46:50:50.84:791,51,0	1/1:0,38:38:50.94:805,51,0	1/1:1,25:26:26.10:480,26,0	1/1:2,18:23:46.87:711,47,0	1/1:11,4:15:39.22:532,39,0	1/1:17,11:28:10.97:70,11,0	1/1:13,3:16:1.15:5,1,0	0/0:42,0:42:99:0,117,1635	0/1:15,1:37:5.94:6,0,496	0/0:18,0:27:28:0,28,526	0/0:14,2:29:30.65:0,31,534	1/1:0,43:42:99:1993,126,0	1/1:1,33:34:62.79:997,63,0	1/1:1,14:15:42.14:642,42,0
chr10	14099495	.	CTA	C	737.52	PASS	AB=0.841;AC=8;AF=0.143;AN=56;BaseQRankSum=9.520;DP=878;FS=13.856;HRun=0;HaplotypeScore=278.0604;InbreedingCoeff=-0.1894;MQ=54.06;MQ0=10;MQRankSum=-7.227;QD=2.69;ReadPosRankSum=-2.840;VQSLOD=0.0737;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:96.32:0,96,1369	0/0:8,4:12:4.26:0,4,61	0/0:17,0:12:8.33:0,8,217	0/0:21,0:16:28.60:0,29,409	0/0:25,8:32:21.22:0,21,273	0/0:26,0:27:32.59:0,33,486	0/0:24,0:22:14.60:0,15,203	0/0:46,0:45:99:0,133,1928	0/1:27,4:31:30.93:31,0,146	0/1:45,8:53:99:181,0,2101	0/0:17,8:24:18.05:0,18,348	0/0:41,0:41:96.31:0,96,1423	0/0:36,0:36:84.23:0,84,1176	0/0:23,0:23:48.13:0,48,669	0/0:38,15:53:60.20:0,60,1054	0/1:28,9:37:39.03:39,0,709	0/0:23,1:24:28.81:0,29,524	0/0:21,2:23:7.68:0,8,697	0/1:22,1:20:38.13:38,0,546	0/1:27,5:32:12.01:12,0,380	0/0:16,0:16:2.23:0,2,37	0/0:39,0:39:99:0,117,1985	0/0:38,0:38:53.92:0,54,826	0/0:27,0:27:39.13:0,39,616	0/0:30,0:29:54.13:0,54,804	0/1:37,9:45:99:247,0,1636	0/1:28,7:35:64.13:64,0,927	0/1:9,8:15:99:259,0,283
chr10	14099640	.	T	TCA	20405.38	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-16.176;DP=683;FS=9.865;HRun=0;HaplotypeScore=70.5747;InbreedingCoeff=0.9998;MQ=59.28;MQ0=8;MQRankSum=-4.441;QD=47.13;ReadPosRankSum=2.153;VQSLOD=5.8935;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,115,1630	1/1:0,14:14:39.13:730,39,0	0/0:20,0:14:39.09:0,39,533	0/0:21,0:18:46.30:0,46,605	1/1:0,13:13:36.12:674,36,0	1/1:0,18:19:51.17:935,51,0	1/1:1,17:19:39.13:725,39,0	1/1:0,23:26:72.14:1213,72,0	1/1:0,28:29:72.25:1344,72,0	1/1:0,26:27:78.25:1423,78,0	1/1:0,18:19:45.15:842,45,0	0/0:30,0:30:87.29:0,87,1279	0/0:29,0:29:84.24:0,84,1178	0/0:25,0:25:72.23:0,72,1039	1/1:3,31:33:87.30:1627,87,0	1/1:1,31:32:81.28:1515,81,0	1/1:3,31:35:84.29:1571,84,0	1/1:0,21:21:51.17:955,51,0	1/1:2,15:17:51.16:894,51,0	1/1:0,20:20:57.20:1067,57,0	1/1:2,38:41:99:1910,102,0	0/0:25,0:25:75.23:0,75,1066	0/0:15,0:15:45.13:0,45,640	0/0:22,0:22:63.21:0,63,924	0/0:24,0:24:72.24:0,72,1059	1/1:1,31:32:90.27:1635,90,0	1/1:1,21:21:45.15:842,45,0	1/1:1,10:10:27.09:505,27,0
chr10	14100760	.	T	TA	10844.40	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-15.169;DP=612;FS=0.332;HRun=8;HaplotypeScore=54.2365;InbreedingCoeff=0.9792;MQ=66.39;MQ0=0;MQRankSum=-2.893;QD=27.38;ReadPosRankSum=-0.011;VQSLOD=5.1557;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,108,982	1/1:1,7:8:21.06:242,21,0	0/0:11,0:10:16.24:0,16,137	0/0:18,0:17:5.45:0,5,240	1/1:5,29:34:82.44:922,82,0	1/1:1,21:22:29.70:596,30,0	1/1:2,11:13:33.10:381,33,0	1/1:11,33:44:96.26:1088,96,0	1/1:1,19:20:51.15:589,51,0	1/1:6,23:29:69.21:796,69,0	1/1:5,10:15:30.09:345,30,0	0/0:17,0:17:42.01:0,42,380	0/0:22,0:22:63.02:0,63,572	0/0:25,0:25:71.99:0,72,645	1/1:6,21:27:63.19:727,63,0	1/1:1,12:13:36.11:416,36,0	1/1:1,18:18:51.15:589,51,0	1/1:1,19:20:54.16:623,54,0	1/1:7,12:20:20.62:464,21,0	1/1:2,16:18:42.12:481,42,0	1/1:4,15:19:45.13:519,45,0	0/0:17,0:17:48.03:0,48,439	0/0:29,0:29:83.96:0,84,747	0/0:18,0:18:45.01:0,45,407	0/0:20,0:20:51.02:0,51,467	1/1:3,26:29:78.22:889,78,0	1/1:4,29:33:72.21:831,72,0	1/1:3,10:13:30.09:346,30,0
chr10	14101515	.	CA	C	16700.50	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=13.943;DP=753;FS=8.096;HRun=1;HaplotypeScore=76.3990;InbreedingCoeff=0.9994;MQ=89.68;MQ0=0;MQRankSum=-3.756;QD=39.39;ReadPosRankSum=0.830;VQSLOD=5.2264;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,135,2110	1/1:0,8:8:21.07:294,21,0	0/0:29,0:30:72.72:0,73,1234	0/0:25,0:25:58.45:0,58,915	1/1:0,29:29:84.28:1175,84,0	0/0:20,0:20:60.20:0,60,959	0/0:26,0:26:78.25:0,78,1217	1/1:0,29:29:87.21:1130,87,0	1/1:0,17:17:48.16:671,48,0	1/1:0,28:28:81.26:1115,81,0	1/1:0,19:19:48.16:671,48,0	0/0:39,0:39:99:0,117,1865	0/0:24,0:24:72.23:0,72,1127	0/0:27,0:27:81.28:0,81,1293	1/1:0,41:41:99:1637,117,0	1/1:0,24:24:66.22:923,66,0	1/1:0,26:26:78.26:1091,78,0	1/1:0,22:22:63.21:881,63,0	1/1:0,17:17:51.17:714,51,0	1/1:0,31:31:84.28:1175,84,0	1/1:0,58:58:99:2224,160,0	0/0:21,0:21:60.20:0,60,957	0/0:21,0:21:60.18:0,60,935	0/0:36,0:36:99:0,108,1695	0/0:15,0:15:45.15:0,45,714	1/1:0,22:22:66.20:904,66,0	1/1:0,36:36:99:1468,105,0	1/1:0,17:17:45.15:629,45,0
chr10	14104669	.	CTTTT	C	5848.88	PASS	AB=0.725;AC=27;AF=0.482;AN=56;BaseQRankSum=3.265;DP=586;FS=10.582;HRun=16;HaplotypeScore=118.8349;InbreedingCoeff=0.6183;MQ=60.29;MQ0=11;MQRankSum=-8.264;QD=19.37;ReadPosRankSum=3.334;VQSLOD=2.5860;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:29:69.16:0,69,1319	1/1:1,5:6:11.99:157,12,0	0/0:47,0:12:23.53:0,24,216	0/0:40,0:16:2.41:0,2,78	1/1:10,8:21:23.46:302,23,0	0/0:18,0:19:51.15:0,51,956	0/0:18,0:20:47.98:0,48,849	0/1:16,12:28:55.41:384,0,55	1/1:8,5:13:23.90:299,24,0	1/1:14,7:22:24.71:356,25,0	1/1:1,5:7:0.94:107,1,0	0/0:18,0:23:50.62:0,51,873	0/0:14,0:14:30.52:0,31,547	0/0:19,0:19:48.04:0,48,856	1/1:11,13:26:53.96:688,54,0	1/1:8,17:26:66.03:837,66,0	1/1:9,9:21:40:461,40,0	0/1:8,0:11:4.90:5,0,19	1/1:15,12:25:15.52:497,16,0	0/1:8,7:16:4.50:289,0,5	0/1:9,3:12:24.99:85,0,25	0/0:13,0:14:27.09:0,27,527	0/0:16,0:15:39.10:0,39,700	0/0:25,0:24:51.17:0,51,1030	0/0:15,0:17:42:0,42,723	1/1:8,15:26:59.89:755,60,0	0/1:16,7:25:9.77:469,0,10	1/1:6,3:6:14.95:157,15,0
chr10	14105298	.	A	AAT	4490.40	PASS	AB=1.000;AC=27;AF=0.643;AN=42;BaseQRankSum=-5.741;DP=216;FS=2.352;HRun=0;HaplotypeScore=17.5243;InbreedingCoeff=0.4671;MQ=69.02;MQ0=11;MQRankSum=-1.537;QD=30.97;ReadPosRankSum=1.426;VQSLOD=5.7302;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:5:15.01:0,15,173	./.	0/1:17,0:4:19.94:26,0,20	0/0:45,0:8:6.86:0,7,48	1/1:0,1:1:3.01:50,3,0	0/0:3,0:3:9.02:0,9,103	./.	1/1:9,33:42:99:1552,99,0	./.	1/1:0,3:3:9.03:151,9,0	./.	./.	0/0:2,0:2:3.01:0,3,38	0/0:3,0:3:3.01:0,3,38	1/1:1,2:3:3.01:50,3,0	1/1:3,0:3:3.01:48,3,0	1/1:2,23:25:60.21:1003,60,0	1/1:3,18:21:48.16:798,48,0	1/1:1,0:1:2.98:21,3,0	1/1:0,1:1:3.01:50,3,0	1/1:2,0:2:3.01:41,3,0	./.	./.	0/0:1,0:1:3.01:0,3,38	0/0:4,0:4:3.01:0,3,38	1/1:4,0:4:3.01:47,3,0	1/1:3,3:6:6.02:100,6,0	1/1:3,13:13:33.11:551,33,0
chr10	14105428	.	TA	T	3006.56	PASS	AB=0.583;AC=31;AF=0.554;AN=56;BaseQRankSum=5.239;DP=307;FS=1.933;HRun=11;HaplotypeScore=31.1750;InbreedingCoeff=0.7944;MQ=69.65;MQ0=0;MQRankSum=0.238;QD=15.26;ReadPosRankSum=-1.471;VQSLOD=2.9128;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,2:25:16.84:0,17,571	1/1:1,2:3:5.99:49,6,0	0/0:7,0:6:8.81:0,9,77	0/0:8,0:8:8.12:0,8,107	1/1:3,8:11:20.94:172,21,0	0/0:12,0:12:27.06:0,27,282	0/0:12,0:12:29.99:0,30,297	1/1:7,29:36:83.84:680,84,0	1/1:0,2:2:5.99:49,6,0	1/1:3,13:16:38.95:320,39,0	1/1:3,6:9:14.93:117,15,0	0/0:8,0:8:15:0,15,148	0/0:5,0:5:3:0,3,32	0/0:8,0:8:18.05:0,18,192	1/1:4,6:10:17.93:142,18,0	1/1:2,6:8:11.98:98,12,0	1/1:7,23:30:62.91:517,63,0	1/1:3,10:13:17.98:148,18,0	1/1:2,7:9:20.98:172,21,0	1/1:2,9:11:26.89:211,27,0	1/1:2,8:10:11.98:99,12,0	0/0:2,0:2:3.01:0,3,32	0/0:2,0:2:6.02:0,6,64	0/0:18,0:18:51.13:0,51,543	0/0:3,0:3:9.02:0,9,96	1/1:2,8:10:23.95:194,24,0	0/1:4,10:14:7.99:148,0,8	1/1:0,4:4:11.99:98,12,0
chr10	14107849	.	GA	G	5692.04	PASS	AB=0.687;AC=32;AF=0.571;AN=56;BaseQRankSum=4.613;DP=679;FS=8.997;HRun=13;HaplotypeScore=82.0250;InbreedingCoeff=0.5686;MQ=71.45;MQ0=1;MQRankSum=0.213;QD=11.64;ReadPosRankSum=3.146;VQSLOD=4.2921;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:19:26.85:0,27,234	1/1:3,10:13:26.83:197,27,0	0/0:16,0:13:14.68:0,15,123	0/0:18,1:17:7.23:0,7,182	1/1:8,23:31:38.38:436,38,0	1/1:7,9:16:17.84:131,18,0	1/1:4,13:18:5.22:195,5,0	1/1:11,24:35:41.35:463,41,0	1/1:7,23:31:58.66:421,59,0	1/1:18,21:40:64.53:465,65,0	0/1:13,12:25:0.40:166,0,0	0/0:20,0:22:47.89:0,48,442	0/0:22,0:24:38.88:0,39,357	0/1:14,2:16:16.79:17,0,168	1/1:5,21:28:56.84:404,57,0	1/1:5,23:28:62.57:459,63,0	1/1:5,17:23:44.68:328,45,0	1/1:2,17:19:41.73:306,42,0	0/1:13,9:24:43.69:165,0,44	0/1:13,20:33:20.57:331,0,21	1/1:4,10:14:0.62:168,1,0	0/0:30,0:30:60.06:0,60,567	0/0:23,0:23:37.67:0,38,422	0/0:14,0:14:36.04:0,36,341	0/0:21,0:23:54.90:0,55,465	0/1:11,17:30:0.37:304,0,0	1/1:12,28:41:24.04:494,24,0	0/1:10,13:23:13.70:240,0,14
chr10	14111218	.	G	GGGC	753.51	PASS	AB=0.638;AC=2;AF=0.036;AN=56;BaseQRankSum=7.310;DP=539;FS=1.879;HRun=0;HaplotypeScore=88.0394;InbreedingCoeff=-0.0396;MQ=82.02;MQ0=0;MQRankSum=-6.919;QD=22.16;ReadPosRankSum=1.912;VQSLOD=3.7030;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:84.27:0,84,1515	0/0:5,0:5:12.04:0,12,194	0/0:8,0:8:21.07:0,21,392	0/0:22,0:22:50.61:0,51,851	0/0:11,0:11:33.11:0,33,602	0/1:5,9:14:99:379,0,131	0/1:10,10:20:99:463,0,302	0/0:24,0:24:60.20:0,60,1038	0/0:15,0:15:45.15:0,45,839	0/0:20,0:20:54.18:0,54,999	0/0:13,0:13:39.12:0,39,689	0/0:25,0:25:75.26:0,75,1391	0/0:25,0:25:72.19:0,72,1263	0/0:29,0:29:84.26:0,84,1502	0/0:17,0:17:51.17:0,51,944	0/0:22,0:22:63.20:0,63,1137	0/0:32,0:32:96.30:0,96,1755	0/0:12,0:12:36.12:0,36,671	0/0:22,0:22:66.20:0,66,1175	0/0:7,0:7:21.07:0,21,383	0/0:61,0:61:99:0,184,3346	0/0:15,0:15:45.13:0,45,786	0/0:12,0:12:36.12:0,36,667	0/0:33,0:33:99:0,99,1768	0/0:15,0:15:45.15:0,45,827	0/0:16,0:16:45.15:0,45,804	0/0:12,0:12:36.12:0,36,670	0/0:4,0:4:12.04:0,12,223
chr10	14111220	.	T	TGGCC	1027.06	PASS	AB=0.646;AC=2;AF=0.036;AN=56;BaseQRankSum=6.222;DP=546;FS=4.106;HRun=0;HaplotypeScore=98.6848;InbreedingCoeff=-0.0024;MQ=84.46;MQ0=0;MQRankSum=-6.644;QD=29.34;ReadPosRankSum=0.033;VQSLOD=3.5316;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:81.25:0,81,1588	0/0:4,0:4:12.01:0,12,175	0/0:11,0:11:27.08:0,27,483	0/0:23,0:23:57.11:0,57,991	0/0:12,0:12:36.08:0,36,627	0/1:6,9:15:13.86:517,0,14	0/1:10,10:20:95.88:599,0,96	0/0:23,0:23:63.15:0,63,1001	0/0:15,0:15:45.15:0,45,929	0/0:18,0:18:51.17:0,51,1020	0/0:13,0:13:39.11:0,39,741	0/0:28,0:28:75.26:0,75,1542	0/0:27,0:27:78.17:0,78,1474	0/0:30,0:30:86.94:0,87,1683	0/0:17,0:17:51.17:0,51,1040	0/0:21,0:21:60.18:0,60,1170	0/0:32,0:32:93.32:0,93,1948	0/0:12,0:12:36.12:0,36,754	0/0:20,0:20:60.16:0,60,1077	0/0:7,0:7:21.07:0,21,424	0/0:60,0:60:99:0,178,3628	0/0:16,0:16:48.11:0,48,853	0/0:13,0:13:36.10:0,36,653	0/0:34,0:34:99:0,99,1925	0/0:15,0:15:45.15:0,45,925	0/0:16,0:16:45.14:0,45,873	0/0:12,0:12:36.12:0,36,753	0/0:4,0:4:12.04:0,12,251
chr10	14112136	.	GGTGTGT	G	5295.05	PASS	AB=0.897;AC=34;AF=0.607;AN=56;BaseQRankSum=-3.238;DP=728;FS=5.483;HRun=0;HaplotypeScore=173.3113;InbreedingCoeff=0.7189;MQ=63.35;MQ0=24;MQRankSum=-4.489;QD=11.95;ReadPosRankSum=1.417;VQSLOD=3.7771;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:32:30.10:0,30,555	1/1:2,3:5:9.03:147,9,0	0/0:24,0:16:6.02:0,6,77	0/0:34,0:26:3.01:0,3,37	1/1:20,2:22:26.28:347,26,0	0/1:20,1:24:27.34:27,0,356	0/0:17,0:19:18.05:0,18,217	1/1:19,9:26:40.19:458,40,0	1/1:10,6:16:24.04:419,24,0	1/1:20,4:23:26.29:408,26,0	1/1:16,0:15:6.02:102,6,0	0/0:25,0:41:33.11:0,33,725	0/0:13,0:18:18.06:0,18,408	0/0:25,0:35:53.20:0,53,1128	1/1:27,6:31:27.91:405,28,0	1/1:20,9:29:36.04:562,36,0	1/1:21,1:22:4.01:185,4,0	1/1:8,3:10:9.03:169,9,0	1/1:21,1:21:11.70:165,12,0	1/1:11,4:17:11.91:212,12,0	1/1:74,2:72:43.35:561,43,0	0/0:16,0:17:27.08:0,27,593	0/0:11,0:17:22.61:0,23,510	0/0:27,0:41:55.41:0,55,1288	0/1:18,0:19:24.23:24,0,567	1/1:21,8:28:52.41:854,52,0	1/1:9,9:18:6.49:126,6,0	1/1:9,7:14:6.02:124,6,0
chr10	14116027	.	TTTTG	T	16662.55	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=16.334;DP=748;FS=0.310;HRun=0;HaplotypeScore=129.9934;InbreedingCoeff=0.9995;MQ=70.84;MQ0=4;MQRankSum=-3.880;QD=35.15;ReadPosRankSum=4.305;VQSLOD=5.0338;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:78.27:0,78,1923	1/1:2,12:14:33.11:560,33,0	0/0:24,0:23:48.10:0,48,1009	0/0:27,0:27:60.19:0,60,1387	1/1:5,21:26:51.09:803,51,0	1/1:7,23:30:63.22:1069,63,0	1/1:5,11:16:27.09:458,27,0	1/1:14,22:36:66.12:957,66,0	1/1:4,24:28:69.24:1171,69,0	1/1:5,23:27:66.23:1120,66,0	1/1:6,16:22:42.14:713,42,0	0/0:34,0:34:81.26:0,81,1937	0/0:22,0:22:51.18:0,51,1271	0/0:31,0:31:84.29:0,84,2092	1/1:12,34:46:78.27:1324,78,0	1/1:7,39:46:99:1883,111,0	1/1:2,21:23:57.20:967,57,0	1/1:4,20:25:48.16:792,48,0	1/1:11,16:27:48.14:751,48,0	1/1:5,24:27:60.21:1018,60,0	1/1:4,24:28:64.30:1116,64,0	0/0:24,0:24:66.23:0,66,1593	0/0:22,0:22:42.14:0,42,1009	0/0:24,0:24:66.23:0,66,1641	0/0:34,0:34:90.29:0,90,2185	1/1:3,21:23:60.19:993,60,0	1/1:2,15:17:33.11:559,33,0	1/1:1,8:9:24.08:407,24,0
chr10	14116491	.	T	TTCCTGGGAGC	35843.28	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-4.262;DP=714;FS=0.000;HRun=0;HaplotypeScore=204.3723;InbreedingCoeff=0.9869;MQ=77.59;MQ0=0;MQRankSum=-17.860;QD=84.54;ReadPosRankSum=-0.048;VQSLOD=4.5562;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,135,4175	1/1:8,5:18:27.09:1189,27,0	0/0:27,0:27:61.43:0,61,1376	0/0:20,0:20:54.15:0,54,1331	1/1:5,7:18:8.45:331,8,0	1/1:9,0:30:75.25:2290,75,0	1/1:9,0:32:66.22:2103,66,0	1/1:11,2:21:60.21:2367,60,0	1/1:6,17:25:60.21:2950,60,0	1/1:10,11:26:63.18:2825,63,0	1/1:4,8:16:15.05:657,15,0	0/0:40,0:40:99:0,108,3228	0/0:32,0:32:84.27:0,84,2623	0/0:32,0:32:90.25:0,90,2574	1/1:4,15:23:54.19:2730,54,0	1/1:7,18:30:72.25:3670,72,0	1/1:21,7:31:42.10:1744,42,0	1/1:5,15:22:45.15:2331,45,0	1/1:6,7:21:57.20:2218,57,0	1/1:9,8:21:24.08:1196,24,0	1/1:19,12:38:37.16:1655,37,0	0/0:21,0:21:51.16:0,51,1441	0/0:20,0:20:48.15:0,48,1393	0/0:38,0:38:99:0,111,3191	0/0:13,0:13:36.12:0,36,1072	1/1:5,14:24:66.21:2988,66,0	1/1:6,9:18:42.14:2062,42,0	1/1:10,0:10:21.05:538,21,0
chr10	14123908	.	TACACACACACACACACAC	T	4500.78	PASS	AB=0.912;AC=31;AF=0.620;AN=50;BaseQRankSum=4.952;DP=450;FS=4.034;HRun=0;HaplotypeScore=183.9704;InbreedingCoeff=0.4348;MQ=47.76;MQ0=29;MQRankSum=-5.296;QD=16.07;ReadPosRankSum=0.555;VQSLOD=3.8494;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:24:14.91:0,15,566	1/1:3,4:7:3:145,3,0	./.	./.	1/1:3,3:6:9.03:292,9,0	0/1:10,0:12:32.78:80,0,33	0/1:19,0:19:11.63:16,0,12	0/1:32,0:32:30.63:31,0,52	1/1:10,1:10:3.01:145,3,0	1/1:10,0:8:3.89:53,4,0	./.	0/0:11,0:11:5.78:0,6,428	0/0:8,0:10:7.58:0,8,486	0/0:18,0:24:21.07:0,21,996	1/1:14,3:17:9.03:415,9,0	1/1:19,8:29:24.08:1099,24,0	1/1:24,6:28:4.82:287,5,0	1/1:16,2:18:21.03:565,21,0	1/1:9,2:10:3.01:145,3,0	1/1:8,7:17:18.06:733,18,0	1/1:30,0:26:3:27,3,0	0/0:9,0:7:2.03:0,2,233	0/0:5,0:5:6.02:0,6,489	0/0:29,0:27:38.75:0,39,2481	0/0:16,0:15:14.46:0,14,871	1/1:9,0:9:3.85:73,4,0	1/1:9,1:9:6.02:270,6,0	1/1:3,0:3:3.01:126,3,0
chr10	14125418	.	TA	T	4851.12	PASS	AB=1.000;AC=33;AF=0.589;AN=56;BaseQRankSum=4.008;DP=572;FS=6.951;HRun=13;HaplotypeScore=65.3193;InbreedingCoeff=0.9020;MQ=58.87;MQ0=22;MQRankSum=0.121;QD=13.48;ReadPosRankSum=1.938;VQSLOD=5.2982;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:56.64:0,57,512	1/1:0,9:9:23.86:175,24,0	0/1:22,0:5:3.49:3,0,23	0/0:17,0:10:11.76:0,12,72	1/1:4,16:21:47.43:337,47,0	0/0:14,0:14:36.06:0,36,350	0/0:13,0:14:26.88:0,27,248	1/1:7,14:18:35.74:262,36,0	1/1:2,14:16:38.78:284,39,0	1/1:1,16:18:46.78:334,47,0	1/1:5,15:20:41.59:297,42,0	0/0:20,0:19:39.01:0,39,369	0/0:18,0:18:42.06:0,42,403	0/0:20,0:19:45.07:0,45,438	1/1:6,18:23:41.72:306,42,0	1/1:3,22:27:58:439,58,0	1/1:0,35:35:77.56:569,78,0	1/1:8,18:24:40.81:290,41,0	1/1:9,11:13:2.68:172,3,0	1/1:7,13:19:29.66:219,30,0	1/1:3,9:11:17.01:130,17,0	0/0:13,0:12:20.98:0,21,194	0/0:13,0:13:26.99:0,27,253	0/0:17,0:17:39.06:0,39,378	0/0:31,0:30:66.36:0,66,611	1/1:5,31:35:82.47:595,82,0	1/1:4,23:26:53.19:393,53,0	1/1:1,2:3:5.97:44,6,0
chr10	14126994	.	TG	T	685.32	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=1.409;DP=694;FS=4.246;HRun=3;HaplotypeScore=89.3690;InbreedingCoeff=0.9695;MQ=76.45;MQ0=0;MQRankSum=-2.543;QD=28.55;ReadPosRankSum=0.714;VQSLOD=2.9089;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,144,2062	0/0:4,0:4:12.01:0,12,152	0/0:18,0:18:45.15:0,45,640	0/0:13,0:13:36:0,36,461	0/0:22,0:22:63.21:0,63,905	0/0:28,0:28:78.26:0,78,1123	0/0:22,0:22:66.22:0,66,950	0/0:32,0:32:93.30:0,93,1321	0/0:21,0:21:60.20:0,60,864	0/0:17,0:17:48.13:0,48,670	0/0:10,0:10:30.09:0,30,415	0/0:34,0:34:99:0,99,1422	0/0:32,0:32:96.32:0,96,1382	0/0:39,0:39:99:0,114,1624	0/0:20,0:20:57.18:0,57,801	0/0:32,0:32:96.32:0,96,1381	0/0:45,0:45:99:0,132,1896	0/0:25,0:25:66.22:0,66,946	0/0:25,0:25:72.22:0,72,1016	0/0:17,0:17:51.16:0,51,714	0/0:45,0:45:99:0,135,1940	0/0:17,0:17:51.17:0,51,732	0/0:21,0:21:57.19:0,57,819	0/0:19,0:19:57.19:0,57,821	1/1:2,22:24:63.20:780,63,0	0/0:29,0:29:84.27:0,84,1192	0/0:21,0:21:57.18:0,57,801	0/0:13,0:13:39.13:0,39,562
chr10	14132983	.	G	GACACACACACACACACAC	5446.90	PASS	AB=0.980;AC=18;AF=0.321;AN=56;BaseQRankSum=12.776;DP=804;FS=6.333;HRun=0;HaplotypeScore=357.7406;InbreedingCoeff=-0.3134;MQ=47.52;MQ0=15;MQRankSum=-7.367;QD=12.02;ReadPosRankSum=-4.180;VQSLOD=1.9303;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:54:99:0,141,4261	0/1:7,0:7:30.46:30,0,36	0/0:33,0:12:22.76:0,23,435	0/0:44,0:17:27.55:0,28,695	0/1:12,0:12:8.81:173,0,9	0/1:25,0:25:99:193,0,107	0/1:38,0:37:99:201,0,137	0/1:38,0:32:99:391,0,215	0/1:34,0:34:96.80:212,0,97	0/1:33,0:32:99:658,0,203	0/0:11,0:11:6.43:0,6,46	0/0:50,0:51:99:0,147,4981	0/0:29,0:27:76.77:0,77,2974	0/0:35,0:35:99:0,102,3608	0/1:37,0:37:99:149,0,233	0/1:53,0:51:99:842,0,184	0/1:14,7:26:99:369,0,204	0/1:20,0:20:80.48:691,0,80	0/1:20,0:18:88.85:212,0,89	0/1:19,0:18:9.51:10,0,82	0/1:34,0:30:99:142,0,162	0/0:24,0:24:52.76:0,53,1951	0/0:12,0:11:33.09:0,33,977	0/0:33,0:33:96.21:0,96,3150	0/0:24,0:24:47.18:0,47,2333	0/1:24,0:22:88.65:833,0,89	0/1:25,0:25:99:210,0,261	1/1:8,0:7:9:131,9,0
chr10	14132990	.	A	AGG	217.20	PASS	AB=0.813;AC=3;AF=0.054;AN=56;BaseQRankSum=4.379;DP=806;FS=0.000;HRun=0;HaplotypeScore=185.4203;InbreedingCoeff=-0.0743;MQ=48.04;MQ0=19;MQRankSum=-1.238;QD=1.97;ReadPosRankSum=-0.121;VQSLOD=2.5662;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:52:99:0,136,2098	0/0:10,0:10:14.96:0,15,121	0/0:34,0:11:20.52:0,21,344	0/0:46,0:17:36.58:0,37,511	0/0:14,0:14:11.60:0,12,115	0/1:19,6:25:99:175,0,200	0/1:13,17:30:70.65:71,0,186	0/0:36,0:29:78.23:0,78,1020	0/0:34,0:34:34.98:0,35,421	0/0:34,0:32:81.51:0,82,980	0/0:11,0:11:11.63:0,12,121	0/0:53,0:53:99:0,143,2104	0/0:35,0:32:91.14:0,91,1312	0/0:35,0:35:99:0,102,1605	0/0:37,0:37:4.32:0,4,254	0/1:54,0:52:70.71:71,0,222	0/0:24,0:24:30.07:0,30,401	0/0:21,0:21:3.62:0,4,268	0/0:19,0:16:47.88:0,48,539	0/0:17,0:16:17.62:0,18,226	0/0:35,0:31:38.93:0,39,462	0/0:22,0:22:62.63:0,63,864	0/0:11,0:10:30.10:0,30,485	0/0:32,0:32:93.31:0,93,1456	0/0:23,0:23:69.21:0,69,1067	0/0:24,0:22:59.92:0,60,677	0/0:29,0:29:68.59:0,69,771	0/0:7,0:6:9:0,9,89
chr10	14133004	.	ACT	A	2605.15	PASS	AB=0.965;AC=33;AF=0.589;AN=56;BaseQRankSum=2.873;DP=782;FS=4.145;HRun=0;HaplotypeScore=169.8995;InbreedingCoeff=0.4547;MQ=49.68;MQ0=19;MQRankSum=-0.492;QD=5.30;ReadPosRankSum=-6.970;VQSLOD=0.9316;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:46,1:46:38.43:0,38,1234	1/1:10,0:10:14.89:108,15,0	0/0:42,0:15:14.29:0,14,263	0/0:48,0:19:17.48:0,17,178	1/1:14,0:14:14.89:123,15,0	0/1:24,0:24:38.37:66,0,38	1/1:22,0:21:4.17:154,4,0	1/1:31,0:25:8.01:198,8,0	1/1:32,0:32:7.77:69,8,0	0/1:30,0:28:44.28:139,0,44	1/1:10,0:10:8.84:61,9,0	0/0:49,3:52:24.56:0,25,1446	0/1:35,2:34:22.98:23,0,795	0/0:34,0:34:47.26:0,47,1076	1/1:37,0:37:25.11:212,25,0	0/1:50,0:48:5.54:209,0,6	1/1:25,0:25:4.58:181,5,0	1/1:21,0:21:22.07:222,22,0	1/1:20,0:17:20.54:190,21,0	0/1:12,0:11:1.43:20,0,1	1/1:35,0:32:41.87:331,42,0	0/1:16,5:21:56.62:57,0,544	0/0:10,0:9:18.04:0,18,262	0/0:33,0:33:40.31:0,40,827	0/0:23,1:24:18.95:0,19,562	0/1:26,0:24:10.35:146,0,10	1/1:26,0:26:24.45:184,24,0	1/1:9,0:8:13.22:109,13,0
chr10	14134519	.	TC	T	14938.34	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=14.394;DP=798;FS=4.143;HRun=2;HaplotypeScore=80.0505;InbreedingCoeff=0.9988;MQ=85.19;MQ0=0;MQRankSum=-4.202;QD=36.52;ReadPosRankSum=2.339;VQSLOD=5.5834;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:63,0:63:99:0,184,2730	1/1:0,11:11:30.10:390,30,0	0/0:24,0:24:69.19:0,69,978	0/0:24,0:25:59.72:0,60,928	1/1:0,13:13:36.12:467,36,0	0/0:23,0:23:69.23:0,69,1034	0/0:37,0:37:99:0,111,1661	1/1:2,30:32:90.28:1156,90,0	1/1:0,32:32:84.27:1091,84,0	1/1:0,30:30:90.29:1166,90,0	1/1:1,16:17:48.16:623,48,0	0/0:49,0:49:99:0,144,2157	0/0:37,0:37:99:0,105,1552	0/0:37,0:37:99:0,105,1571	1/1:0,26:26:75.24:974,75,0	1/1:1,39:40:99:1481,114,0	1/1:0,26:26:75.24:974,75,0	1/1:0,19:19:54.18:701,54,0	1/1:0,26:26:78.25:1013,78,0	1/1:0,20:20:54.18:698,54,0	1/1:1,43:44:99:1558,120,0	0/0:32,0:32:93.31:0,93,1389	0/0:18,0:18:54.18:0,54,808	0/0:23,0:23:69.23:0,69,1032	0/0:21,0:21:60.20:0,60,897	1/1:0,33:33:99:1283,99,0	1/1:0,34:34:87.28:1130,87,0	1/1:0,6:6:18.06:234,18,0
chr10	14137249	.	T	TCACGTATGCAGTTTATTGT	38673.97	PASS	AB=0.981;AC=18;AF=0.321;AN=56;BaseQRankSum=19.829;DP=895;FS=7.692;HRun=0;HaplotypeScore=592.4670;InbreedingCoeff=-0.4740;MQ=62.76;MQ0=2;MQRankSum=-17.778;QD=65.44;ReadPosRankSum=8.423;VQSLOD=1.7143;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,132,6207	0/1:20,0:20:99:1620,0,327	0/0:18,0:18:21.02:0,21,649	0/0:23,0:21:47.53:0,48,1521	0/1:34,0:34:99:831,0,930	0/1:29,0:29:99:2029,0,830	0/1:35,0:34:99:1137,0,1361	0/1:36,0:36:99:732,0,2178	0/1:36,0:36:99:3091,0,585	0/1:42,0:42:99:4186,0,643	0/1:27,0:27:99:1609,0,543	0/0:38,0:38:81.24:0,81,3597	0/0:28,0:28:66.15:0,66,2688	0/0:42,0:42:99:0,111,5209	0/1:53,0:52:99:3352,0,1310	0/1:51,0:50:99:4590,0,470	0/1:33,0:33:99:2482,0,820	0/1:17,0:17:84.92:1247,0,85	0/1:23,0:23:99:1254,0,462	0/1:29,0:29:99:1873,0,690	0/1:35,0:34:99:585,0,1563	0/0:27,0:27:66.23:0,66,3165	0/0:19,0:19:57.20:0,57,2769	0/0:26,0:26:66.23:0,66,3258	0/0:30,0:30:69.23:0,69,3097	0/1:37,0:37:99:3591,0,351	0/1:44,0:44:99:3564,0,1378	0/1:5,4:10:99:902,0,129
chr10	14141251	.	C	CCGGTCTGGA	14557.33	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=18.513;DP=681;FS=22.275;HRun=0;HaplotypeScore=244.0122;InbreedingCoeff=0.9597;MQ=77.32;MQ0=0;MQRankSum=-16.204;QD=47.26;ReadPosRankSum=2.795;VQSLOD=3.0441;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,156,4186	1/1:9,0:9:27.04:724,27,0	0/0:20,0:20:42:0,42,982	0/0:21,0:21:53.88:0,54,1374	1/1:14,0:14:23.93:625,24,0	0/0:25,0:25:75.20:0,75,2027	0/0:42,0:42:99:0,123,3528	1/1:22,0:22:56.62:885,57,0	1/1:26,0:26:38.81:1267,39,0	1/1:20,0:20:47.94:1078,48,0	1/1:12,0:12:15.01:415,15,0	0/0:46,0:46:99:0,135,3850	0/0:22,0:22:66.22:0,66,1934	0/0:30,0:30:81.28:0,81,2480	1/1:34,0:34:41.82:1370,42,0	1/1:27,0:27:54.19:1759,54,0	1/1:16,0:16:21.07:682,21,0	1/1:10,0:10:12.04:387,12,0	1/1:19,0:19:47.98:1048,48,0	1/1:24,0:24:20.80:597,21,0	1/1:2,8:14:3.01:98,3,0	0/0:16,0:16:48.16:0,48,1430	0/0:24,0:24:57.16:0,57,1610	0/0:51,0:51:99:0,153,4399	0/0:21,0:21:57.18:0,57,1617	1/1:30,0:30:71.61:1670,72,0	1/1:27,0:27:50.85:1653,51,0	1/1:4,0:4:9.03:300,9,0
chr10	14141252	.	C	CGGTCTGGAAAAGATAT	54524.14	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=-4.151;DP=779;FS=17.898;HRun=0;HaplotypeScore=294.2113;InbreedingCoeff=0.9933;MQ=73.01;MQ0=0;MQRankSum=-18.966;QD=134.63;ReadPosRankSum=-1.049;VQSLOD=2.9857;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:57:99:0,156,6291	1/1:7,5:12:33.11:2206,33,0	0/0:19,0:19:19.16:0,19,1478	0/0:21,0:21:57.08:0,57,1899	1/1:4,6:17:31.28:1746,31,0	0/0:25,0:25:75.22:0,75,2909	0/0:41,0:41:99:0,123,5104	1/1:29,0:28:84.26:4349,84,0	1/1:11,11:35:61.09:4315,61,0	1/1:13,7:32:81.71:5021,82,0	1/1:2,4:14:18.02:1103,18,0	0/0:47,0:47:99:0,135,5840	0/0:23,0:23:66.22:0,66,2918	0/0:29,0:29:81.28:0,81,3741	1/1:10,14:43:70.12:5050,70,0	1/1:12,18:39:87.30:6293,87,0	1/1:6,7:23:39.13:2776,39,0	1/1:10,3:18:39.13:2588,39,0	1/1:10,5:27:78.24:4345,78,0	1/1:7,7:30:33.11:2083,33,0	1/1:10,1:11:24.08:1610,24,0	0/0:16,0:16:48.16:0,48,2038	0/0:24,0:24:60.17:0,60,2455	0/0:51,0:51:99:0,154,6582	0/0:21,0:21:57.18:0,57,2375	1/1:7,13:36:95.71:5584,96,0	1/1:4,17:31:58.08:4508,58,0	1/1:4,3:8:12.04:946,12,0
chr10	14147076	.	C	CT	15402.67	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=-16.431;DP=691;FS=1.608;HRun=1;HaplotypeScore=64.3621;InbreedingCoeff=0.9996;MQ=79.46;MQ0=0;MQRankSum=-3.482;QD=40.32;ReadPosRankSum=-0.167;VQSLOD=5.2623;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,117,1503	1/1:0,14:14:42.14:629,42,0	0/0:14,0:14:39.13:0,39,504	0/0:20,0:20:53.95:0,54,630	1/1:1,16:17:48.16:719,48,0	0/0:19,0:19:57.19:0,57,740	0/0:37,0:37:99:0,108,1387	1/1:1,21:22:63.20:926,63,0	1/1:0,20:20:57.19:854,57,0	1/1:1,25:26:69.23:1035,69,0	1/1:0,11:11:27.09:405,27,0	0/0:42,0:42:99:0,123,1564	0/0:32,0:32:93.30:0,93,1207	0/0:34,0:34:99:0,102,1310	1/1:1,34:35:99:1484,99,0	1/1:0,28:28:75.25:1124,75,0	1/1:2,38:40:99:1529,102,0	1/1:2,29:31:78.26:1169,78,0	1/1:5,18:23:60.20:878,60,0	1/1:0,15:15:39.13:585,39,0	1/1:5,37:42:99:1574,105,0	0/0:19,0:19:51.17:0,51,662	0/0:9,0:9:27.09:0,27,351	0/0:23,0:23:66.21:0,66,857	0/0:19,0:19:51.17:0,51,662	1/1:1,30:31:90.30:1349,90,0	1/1:1,16:17:48.12:694,48,0	1/1:0,10:10:30.10:450,30,0
chr10	14154467	.	GGGGAAGATCTAAGTGGGGGATATAGCA	G	1802.92	PASS	AB=1.000;AC=25;AF=0.500;AN=50;BaseQRankSum=-0.368;DP=718;FS=9.154;HRun=0;HaplotypeScore=459.5378;InbreedingCoeff=0.6601;MQ=74.22;MQ0=0;MQRankSum=3.065;QD=5.95;ReadPosRankSum=4.367;VQSLOD=0.4245;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:37:48.14:0,48,3553	1/1:7,0:7:3.01:110,3,0	0/0:32,0:27:8.51:0,9,100	0/0:33,0:27:5.99:0,6,51	0/1:14,0:14:1.40:58,0,1	./.	1/1:25,0:25:1.24:41,1,0	0/0:30,0:28:0:0,0,0	1/1:16,0:16:9.03:227,9,0	1/1:27,5:32:11.97:255,12,0	1/1:7,0:7:3:25,3,0	0/0:55,0:55:99:0,117,9552	0/0:34,0:34:57.18:0,57,4938	0/0:38,0:38:54.16:0,54,3918	1/1:34,0:34:15.03:430,15,0	1/1:29,0:29:6:73,6,0	1/1:18,0:18:2.35:22,2,0	1/1:31,0:31:14.82:256,15,0	./.	0/0:12,0:12:2.49:0,2,6	1/1:39,0:39:1.94:168,2,0	0/0:20,0:19:30.10:0,30,2851	0/0:12,0:12:18.06:0,18,1496	0/0:47,0:47:81.27:0,81,7195	0/0:24,0:24:39.13:0,39,2777	1/1:23,6:29:11.97:218,12,0	1/1:22,0:22:3.01:91,3,0	./.
chr10	14156157	.	TGAG	T	1526.45	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.556;DP=604;FS=14.980;HRun=0;HaplotypeScore=97.4068;InbreedingCoeff=0.9578;MQ=88.90;MQ0=0;MQRankSum=-8.403;QD=38.16;ReadPosRankSum=1.209;VQSLOD=3.9219;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,105,2378	0/0:6,0:6:18.06:0,18,414	0/0:37,0:36:99:0,102,2169	0/0:15,0:15:39.13:0,39,859	0/0:25,0:25:16.57:0,17,628	1/1:0,18:18:45.15:764,45,0	1/1:2,20:22:54.18:884,54,0	0/0:27,0:27:72.17:0,72,1603	0/0:18,0:18:21.07:0,21,466	0/0:16,0:16:45.15:0,45,1001	0/0:22,0:22:30.10:0,30,690	0/0:26,0:26:78.27:0,78,1753	0/0:27,0:27:78.27:0,78,1783	0/0:23,0:23:63.22:0,63,1451	0/0:15,0:15:27.09:0,27,622	0/0:13,0:13:36.12:0,36,829	0/0:16,0:16:45.12:0,45,935	0/0:12,0:12:30.10:0,30,670	0/0:25,0:25:68.20:0,68,1430	0/0:26,0:26:51.16:0,51,1111	0/0:11,0:11:33.10:0,33,716	0/0:29,0:29:84.29:0,84,1909	0/0:33,0:33:96.30:0,96,2090	0/0:28,0:28:78.22:0,78,1661	0/0:24,0:24:69.24:0,69,1571	0/0:19,0:19:54.18:0,54,1153	0/0:25,0:25:27.09:0,27,621	0/0:8,0:8:9.03:0,9,202
chr10	14156175	.	A	ATC	3175.82	PASS	AB=0.815;AC=30;AF=0.536;AN=56;BaseQRankSum=5.568;DP=660;FS=6.986;HRun=0;HaplotypeScore=190.8192;InbreedingCoeff=0.5329;MQ=75.24;MQ0=0;MQRankSum=-9.157;QD=8.04;ReadPosRankSum=-6.167;VQSLOD=1.4878;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:96.25:0,96,1369	1/1:6,0:8:2.30:102,2,0	0/0:25,0:25:59.16:0,59,724	0/0:13,0:13:32.72:0,33,402	1/1:8,1:32:11.20:142,11,0	1/1:19,0:24:44.53:345,45,0	1/1:17,0:26:54.80:438,55,0	1/1:13,16:27:47.90:410,48,0	1/1:2,12:14:5.95:72,6,0	1/1:24,0:23:17.85:204,18,0	0/1:7,18:26:18.42:128,0,18	0/0:26,0:29:81.24:0,81,1160	0/0:21,0:22:60.17:0,60,853	0/0:25,0:25:72.19:0,72,979	0/1:9,1:17:31.46:40,0,31	0/1:20,0:20:35.61:147,0,36	0/1:15,0:15:4.16:118,0,4	1/1:13,0:14:13.49:125,13,0	1/1:22,0:22:42.23:313,42,0	0/1:36,0:36:20.20:149,0,20	1/1:3,0:3:8.94:68,9,0	0/0:37,0:38:99:0,108,1485	0/0:27,0:29:86.86:0,87,1251	0/0:21,0:21:60.17:0,60,843	0/0:28,0:28:84.24:0,84,1167	1/1:32,0:32:33.26:360,33,0	0/1:14,0:33:22.77:80,0,23	1/1:12,0:18:19.53:144,20,0
chr10	14156176	.	T	TC	1818.58	PASS	AB=0.957;AC=19;AF=0.339;AN=56;BaseQRankSum=-0.722;DP=603;FS=40.015;HRun=0;HaplotypeScore=183.5755;InbreedingCoeff=-0.3038;MQ=76.44;MQ0=0;MQRankSum=-6.395;QD=5.38;ReadPosRankSum=-1.078;VQSLOD=1.3352;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:96.24:0,96,1262	0/1:8,0:8:13.46:68,0,13	0/0:25,0:24:59.15:0,59,700	0/0:13,0:13:32.26:0,32,370	0/1:10,0:10:13.19:13,0,25	0/1:23,0:23:74.84:184,0,75	0/1:26,0:26:4.96:237,0,5	0/1:26,0:24:16.60:259,0,17	0/1:13,0:13:12.47:22,0,12	0/1:24,0:23:69.45:134,0,69	0/1:27,0:27:56.04:82,0,56	0/0:29,0:29:84.17:0,84,1080	0/0:22,0:22:66.12:0,66,828	0/0:25,0:25:75.15:0,75,940	0/1:9,0:9:4.11:4,0,63	0/1:20,0:20:80.71:122,0,81	0/1:15,0:15:45.90:96,0,46	0/1:13,0:13:25.89:88,0,26	0/1:8,13:22:13.95:219,0,14	0/1:17,18:35:77.59:78,0,132	1/1:3,0:3:8.94:68,9,0	0/0:38,0:38:99:0,114,1432	0/0:30,0:30:81.03:0,81,1124	0/0:20,0:20:60.16:0,60,772	0/0:28,0:28:84.24:0,84,1082	0/1:32,0:32:42.69:271,0,43	0/1:17,0:17:13.45:13,0,113	0/1:15,0:13:23.77:24,0,63
chr10	14159341	.	TA	T	8837.88	PASS	AB=0.875;AC=37;AF=0.661;AN=56;BaseQRankSum=12.143;DP=554;FS=0.000;HRun=10;HaplotypeScore=65.5138;InbreedingCoeff=0.9039;MQ=62.24;MQ0=1;MQRankSum=-0.489;QD=21.98;ReadPosRankSum=1.513;VQSLOD=5.6898;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:72.18:0,72,787	1/1:0,13:13:35.99:313,36,0	0/0:15,0:13:27.06:0,27,285	0/0:6,0:4:9.02:0,9,100	1/1:4,27:31:74.85:631,75,0	1/1:0,14:15:41.03:345,41,0	1/1:0,7:7:18:156,18,0	1/1:4,25:29:74.97:649,75,0	1/1:1,22:23:65.98:573,66,0	1/1:1,19:20:56.99:495,57,0	1/1:0,22:22:65.99:573,66,0	0/0:17,0:17:48.13:0,48,531	0/0:15,0:15:39.09:0,39,423	0/0:19,0:19:51.14:0,51,564	1/1:2,16:18:41.99:365,42,0	1/1:5,19:24:50.98:443,51,0	1/1:4,26:30:71.98:625,72,0	1/1:1,19:20:44.99:391,45,0	1/1:0,16:17:50.02:420,50,0	1/1:4,23:27:38.80:566,39,0	1/1:1,6:7:18:156,18,0	0/1:6,1:7:5:5,0,178	0/0:20,2:22:5.05:0,5,512	0/0:5,0:5:12.03:0,12,133	0/0:24,0:24:69.18:0,69,757	1/1:2,36:38:99:937,108,0	1/1:4,30:35:58.83:728,59,0	1/1:1,18:19:53.98:469,54,0
chr10	14159905	.	C	CCGCGTGCG	4107.48	PASS	AB=0.802;AC=31;AF=0.554;AN=56;BaseQRankSum=8.433;DP=576;FS=17.752;HRun=0;HaplotypeScore=209.2365;InbreedingCoeff=0.6569;MQ=58.50;MQ0=9;MQRankSum=-8.821;QD=12.05;ReadPosRankSum=-3.065;VQSLOD=1.1511;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:62.90:0,63,1645	1/1:10,0:10:9:212,9,0	0/0:20,0:15:3.01:0,3,41	0/0:20,0:13:7.77:0,8,130	1/1:22,0:22:2.95:25,3,0	1/1:24,0:24:10.96:211,11,0	1/1:40,0:39:9.40:196,9,0	1/1:32,0:32:21.13:501,21,0	1/1:9,0:9:3.01:79,3,0	1/1:11,0:11:18.68:584,19,0	1/1:27,0:27:5.67:131,6,0	0/0:21,0:21:42.13:0,42,995	0/0:12,0:12:27.09:0,27,684	0/0:22,0:22:47.62:0,48,1151	1/1:9,0:9:6.02:156,6,0	1/1:20,0:20:2.19:98,2,0	0/0:16,13:29:4.42:0,4,38	0/1:10,11:21:82.94:193,0,83	1/1:19,0:18:23.99:443,24,0	0/1:20,0:20:0.80:74,0,1	0/1:14,7:18:0.11:0,0,0	0/0:10,0:10:21.06:0,21,474	0/0:14,0:14:36.10:0,36,802	0/0:42,0:41:99:0,99,2425	0/0:14,0:13:30.05:0,30,652	1/1:24,0:24:41.55:862,42,0	1/1:19,0:18:14.98:305,15,0	1/1:13,0:13:3.01:38,3,0
chr10	14159916	.	C	CGT	2411.13	PASS	AB=0.944;AC=30;AF=0.536;AN=56;BaseQRankSum=11.522;DP=481;FS=23.067;HRun=0;HaplotypeScore=133.6264;InbreedingCoeff=0.5199;MQ=47.73;MQ0=12;MQRankSum=-10.552;QD=9.38;ReadPosRankSum=0.111;VQSLOD=1.8059;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:72.61:0,73,975	1/1:7,0:7:6.45:67,6,0	0/0:8,0:3:2.60:0,3,10	0/0:15,0:7:7.60:0,8,42	1/1:15,0:15:2.88:25,3,0	1/1:15,3:18:11.86:117,12,0	1/1:35,3:35:13.98:167,14,0	0/1:17,5:24:99:206,0,173	1/1:7,0:7:3:27,3,0	0/1:11,0:11:8.30:296,0,8	1/1:15,0:15:6.01:73,6,0	0/0:19,0:18:51.13:0,51,720	0/0:11,0:11:29.97:0,30,409	0/0:26,0:26:57:0,57,722	1/1:6,0:6:6:53,6,0	1/1:15,0:15:17.94:150,18,0	1/1:21,0:21:11.78:128,12,0	0/1:13,0:13:80.98:85,0,81	0/1:17,0:16:60.84:348,0,61	1/1:15,0:15:2.73:27,3,0	0/0:23,0:20:0:0,0,0	0/0:12,0:12:30.04:0,30,383	0/0:16,0:16:41.27:0,41,535	0/0:48,0:47:99:0,117,1548	0/0:15,0:14:39.03:0,39,494	1/1:18,0:18:51.07:606,51,0	1/1:13,0:13:17.95:163,18,0	1/1:4,0:4:6:65,6,0
chr10	14159917	.	GCACA	G	1267.03	PASS	AB=0.928;AC=31;AF=0.646;AN=48;BaseQRankSum=6.480;DP=409;FS=7.000;HRun=0;HaplotypeScore=115.5686;InbreedingCoeff=0.3595;MQ=48.96;MQ0=12;MQRankSum=-5.988;QD=5.13;ReadPosRankSum=-0.760;VQSLOD=1.7207;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,1:31:19.46:0,19,410	1/1:3,2:5:6:92,6,0	./.	./.	0/1:6,3:9:0:0,0,0	0/0:11,1:12:7.55:0,8,31	1/1:17,5:19:1.24:4,1,0	./.	1/1:1,3:4:2.80:46,3,0	1/1:6,5:11:15.05:230,15,0	1/1:9,3:12:2.74:45,3,0	0/0:19,0:18:22.57:0,23,447	0/0:11,0:11:2.92:0,3,17	0/1:27,0:27:62.07:62,0,213	1/1:2,2:4:6.02:92,6,0	1/1:4,5:9:12.02:185,12,0	1/1:16,1:17:0.47:1,0,0	0/1:12,1:13:5.56:40,0,6	1/1:10,4:13:12.04:185,12,0	1/1:9,4:13:2.72:45,3,0	./.	0/0:13,0:13:14.98:0,15,251	0/1:16,0:16:21.44:21,0,336	0/1:47,1:48:50.03:50,0,681	0/0:15,0:14:18.05:0,18,353	1/1:12,3:15:9.03:138,9,0	1/1:3,3:6:9.03:138,9,0	1/1:0,1:1:3.01:46,3,0
chr10	14159928	.	C	CGCGT	317.55	PASS	AC=4;AF=0.074;AN=54;BaseQRankSum=3.279;DP=399;FS=1.500;HRun=0;HaplotypeScore=134.3811;InbreedingCoeff=0.5582;MQ=44.74;MQ0=13;MQRankSum=-3.706;QD=7.56;ReadPosRankSum=-0.959;VQSLOD=2.3201;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:62.02:0,62,1214	0/0:5,0:5:8.75:0,9,52	./.	0/0:12,0:4:12.02:0,12,129	0/0:7,0:7:0.47:0,0,1	1/1:3,6:12:9.03:247,9,0	1/1:29,0:27:11.30:176,11,0	0/0:20,0:20:46.24:0,46,681	0/0:4,0:4:2.88:0,3,15	0/0:10,0:10:29.43:0,29,245	0/0:11,0:11:2.34:0,2,9	0/0:20,0:19:54.15:0,54,1020	0/0:10,0:10:27.09:0,27,552	0/0:25,0:25:60.19:0,60,1083	0/0:5,0:5:5.81:0,6,32	0/0:10,0:10:11.35:0,11,72	0/0:14,0:14:2.05:0,2,48	0/0:14,0:14:27.01:0,27,343	0/0:13,0:12:35.71:0,36,418	0/0:14,0:14:3.54:0,4,18	0/0:23,0:19:0:0,0,0	0/0:12,0:12:27.09:0,27,536	0/0:18,0:18:48.14:0,48,895	0/0:43,0:42:99:0,102,1984	0/0:14,0:13:36.11:0,36,709	0/0:13,0:13:35.86:0,36,285	0/0:6,0:6:14.59:0,15,99	0/0:1,0:1:2.84:0,3,14
chr10	14160642	.	C	CT	10254.77	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=14.181;DP=680;FS=24.346;HRun=8;HaplotypeScore=93.0064;InbreedingCoeff=0.9988;MQ=70.93;MQ0=3;MQRankSum=-1.776;QD=26.77;ReadPosRankSum=0.541;VQSLOD=3.2874;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,108,975	1/1:0,8:8:24.07:277,24,0	0/0:28,0:26:38.18:0,38,370	0/0:19,0:18:36.46:0,36,321	1/1:4,23:28:65.82:706,66,0	0/0:19,0:19:48.02:0,48,439	0/0:28,0:28:72.01:0,72,652	1/1:6,23:30:71.97:757,72,0	1/1:1,21:22:48.14:552,48,0	1/1:2,30:32:90.25:1026,90,0	1/1:3,27:30:52.90:827,53,0	0/0:26,0:26:75.03:0,75,683	0/0:22,0:22:57:0,57,513	0/0:23,0:23:63.03:0,63,576	1/1:6,17:23:49.39:552,49,0	1/1:4,21:25:54.16:623,54,0	1/1:2,25:26:57.13:640,57,0	1/1:0,9:9:21.06:242,21,0	1/1:1,16:16:45.12:507,45,0	1/1:5,22:27:61.32:662,61,0	1/1:1,10:11:24.07:277,24,0	0/0:29,0:29:72.01:0,72,653	0/0:18,0:18:45.01:0,45,409	0/0:27,0:27:75.03:0,75,683	0/0:18,0:18:51.03:0,51,467	1/1:4,28:32:84.24:958,84,0	1/1:7,25:32:69.19:785,69,0	1/1:2,28:30:75.22:862,75,0
chr10	14162362	.	A	ATTGT	22680.17	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-0.360;DP=646;FS=0.000;HRun=0;HaplotypeScore=115.5140;InbreedingCoeff=0.9994;MQ=76.72;MQ0=1;MQRankSum=-7.310;QD=53.24;ReadPosRankSum=2.967;VQSLOD=5.6410;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,102,1836	1/1:2,15:18:42.14:1075,42,0	0/0:21,0:20:41.13:0,41,656	0/0:19,0:20:48.14:0,48,828	1/1:4,29:35:75.17:1719,75,0	1/1:2,15:17:36.12:943,36,0	1/1:3,11:15:33.11:856,33,0	1/1:13,19:33:81.28:1938,81,0	1/1:6,15:22:39.13:974,39,0	1/1:6,25:32:66.23:1652,66,0	1/1:1,15:17:48.08:1069,48,0	0/0:22,0:22:60.18:0,60,1023	0/0:20,0:20:51.17:0,51,927	0/0:24,0:24:66.23:0,66,1188	1/1:7,26:34:78.27:1941,78,0	1/1:4,22:28:48.16:1257,48,0	1/1:6,16:22:26.86:707,27,0	1/1:2,14:16:30.10:744,30,0	1/1:5,10:15:30.10:740,30,0	1/1:4,18:22:45.15:1057,45,0	1/1:1,14:17:27.09:685,27,0	0/0:15,0:15:45.15:0,45,813	0/0:21,0:21:48.15:0,48,825	0/0:13,0:13:33.11:0,33,590	0/0:24,0:24:66.18:0,66,1109	1/1:7,22:29:69.06:1711,69,0	1/1:7,29:36:93.32:2356,93,0	1/1:0,16:16:48.16:1256,48,0
chr10	14162853	.	A	AT	1988.86	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-3.843;DP=789;FS=7.868;HRun=0;HaplotypeScore=102.5327;InbreedingCoeff=1.0000;MQ=84.38;MQ0=0;MQRankSum=-0.793;QD=39.78;ReadPosRankSum=0.543;VQSLOD=3.3890;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,108,1473	0/0:14,0:14:42.13:0,42,572	0/0:27,0:27:71.96:0,72,1003	0/0:25,0:25:59.27:0,59,750	0/0:21,0:21:63.21:0,63,880	1/1:0,23:23:60.20:959,60,0	1/1:2,25:27:72.25:1151,72,0	0/0:35,0:35:99:0,105,1468	0/0:32,0:32:96.31:0,96,1326	0/0:31,0:31:87.28:0,87,1188	0/0:19,0:19:57.18:0,57,782	0/0:45,0:45:99:0,135,1852	0/0:40,0:40:99:0,117,1630	0/0:30,0:30:84.74:0,85,1157	0/0:35,0:35:99:0,102,1426	0/0:36,0:36:99:0,108,1476	0/0:24,0:24:72.21:0,72,970	0/0:18,0:18:54.18:0,54,754	0/0:21,0:21:63.21:0,63,881	0/0:21,0:21:63.19:0,63,858	0/0:34,0:34:99:0,99,1383	0/0:27,0:27:78.26:0,78,1090	0/0:28,0:28:81.26:0,81,1116	0/0:25,0:25:75.23:0,75,1030	0/0:19,0:19:57.17:0,57,778	0/0:43,0:43:99:0,123,1697	0/0:33,0:33:99:0,99,1382	0/0:19,0:19:57.19:0,57,795
chr10	14164373	.	GAA	G	4824.84	PASS	AB=0.646;AC=35;AF=0.625;AN=56;BaseQRankSum=1.746;DP=559;FS=6.686;HRun=14;HaplotypeScore=72.3317;InbreedingCoeff=0.8852;MQ=59.37;MQ0=27;MQRankSum=-0.611;QD=13.18;ReadPosRankSum=2.731;VQSLOD=3.8162;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:65.60:0,66,809	1/1:1,6:7:8.88:130,9,0	0/0:23,0:6:15.96:0,16,144	0/0:22,0:8:3.45:0,3,75	1/1:5,8:14:29.67:258,30,0	1/1:12,0:11:17.60:53,18,0	1/1:17,0:16:22.36:70,22,0	0/1:14,16:28:13.59:269,0,14	1/1:2,10:12:26.97:250,27,0	1/1:3,8:12:25.05:211,25,0	1/1:3,13:17:39.36:322,39,0	0/0:16,0:15:41.84:0,42,492	0/0:13,0:14:30.03:0,30,353	0/0:13,0:14:32.54:0,33,402	1/1:6,13:21:14.42:216,14,0	1/1:2,12:14:17.75:151,18,0	1/1:10,21:31:32.56:336,33,0	1/1:12,24:32:50.75:456,51,0	1/1:6,16:24:44.59:396,45,0	1/1:6,17:24:44.89:416,45,0	1/1:6,10:15:22.06:203,22,0	0/0:13,0:15:34.94:0,35,401	0/0:16,0:15:26.99:0,27,332	0/0:17,0:15:38.61:0,39,496	0/0:21,0:23:52.36:0,52,658	1/1:6,21:28:48.89:481,49,0	1/1:7,19:24:41.47:356,41,0	1/1:4,10:14:26.99:250,27,0
chr10	14164385	.	AAAT	A	713.08	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=1.261;DP=578;FS=0.000;HRun=0;HaplotypeScore=99.7465;InbreedingCoeff=0.9779;MQ=69.60;MQ0=14;MQRankSum=-1.878;QD=27.43;ReadPosRankSum=3.029;VQSLOD=3.1806;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:28:74.28:0,74,1303	0/0:13,0:13:34.71:0,35,242	0/0:30,0:11:18.90:0,19,307	0/0:27,0:13:22.84:0,23,237	0/0:19,0:19:31.42:0,31,256	1/1:4,9:12:26.68:372,27,0	1/1:2,11:13:32.70:462,33,0	0/0:40,0:37:98.62:0,99,811	0/0:14,0:14:33.49:0,33,181	0/0:17,0:16:23.94:0,24,250	0/0:18,0:18:23.86:0,24,213	0/0:19,0:18:51.09:0,51,852	0/0:14,0:14:36.06:0,36,581	0/0:19,0:19:53.74:0,54,775	0/0:22,0:22:27.78:0,28,217	0/0:17,0:17:15.92:0,16,160	0/0:26,0:25:31.30:0,31,188	0/0:33,0:31:47.55:0,48,289	0/0:23,0:23:45.76:0,46,314	0/0:21,0:21:31.15:0,31,186	0/0:15,0:15:17.55:0,18,137	0/0:14,0:14:39.09:0,39,650	0/0:14,0:14:39.07:0,39,614	0/0:17,0:15:45.12:0,45,824	0/0:22,0:22:53.97:0,54,1043	0/0:28,0:28:59.81:0,60,419	0/0:30,0:27:23.92:0,24,234	0/0:10,0:10:24.70:0,25,108
chr10	14164386	.	AAT	A	709.52	PASS	AB=0.995;AC=19;AF=0.339;AN=56;BaseQRankSum=11.057;DP=581;FS=27.586;HRun=0;HaplotypeScore=88.9315;InbreedingCoeff=0.0076;MQ=71.28;MQ0=14;MQRankSum=-2.859;QD=2.22;ReadPosRankSum=8.840;VQSLOD=-0.5842;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:28:71.17:0,71,1023	0/0:13,0:13:11.91:0,12,151	0/0:32,0:13:22.93:0,23,325	0/0:27,0:13:20.92:0,21,201	0/1:19,0:19:8.21:8,0,144	1/1:10,3:12:26.94:227,27,0	1/1:11,2:13:32.90:273,33,0	0/0:40,0:37:53.81:0,54,545	0/1:14,1:15:26.39:26,0,69	0/1:17,0:16:9.15:9,0,175	0/1:18,0:18:32.60:33,0,82	0/0:19,0:18:48.03:0,48,656	0/0:14,0:14:36.01:0,36,469	0/0:19,0:19:50.66:0,51,606	0/1:23,0:23:5.47:5,0,133	0/1:17,0:17:0.41:0,0,86	0/1:26,0:25:23.03:37,0,23	0/1:33,0:31:16.22:16,0,78	0/1:23,0:23:38.21:38,0,114	0/1:21,0:21:32.92:74,0,33	0/1:15,0:15:23.69:24,0,53	0/0:13,0:13:38.76:0,39,512	0/0:15,0:15:42.01:0,42,537	0/0:17,0:15:45.05:0,45,653	0/0:22,0:22:38.68:0,39,802	0/1:28,0:28:34.52:35,0,130	0/1:29,0:26:44.21:44,0,99	1/1:10,0:10:13.59:33,14,0
chr10	14166117	.	GA	G	1553.18	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.985;DP=698;FS=0.569;HRun=2;HaplotypeScore=66.3705;InbreedingCoeff=0.9997;MQ=82.74;MQ0=0;MQRankSum=-2.267;QD=31.70;ReadPosRankSum=1.105;VQSLOD=3.3337;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,147,2117	0/0:11,0:11:33.08:0,33,471	0/0:23,0:23:69.21:0,69,999	0/0:27,0:27:70.70:0,71,1044	0/0:18,0:18:54.18:0,54,806	1/1:0,20:20:54.18:701,54,0	1/1:1,28:29:75.24:974,75,0	0/0:31,0:31:90.30:0,90,1332	0/0:16,0:16:48.16:0,48,718	0/0:26,0:26:78.25:0,78,1150	0/0:15,0:15:42.10:0,42,586	0/0:26,0:26:78.26:0,78,1164	0/0:23,0:23:69.18:0,69,997	0/0:25,0:25:75.20:0,75,1075	0/0:27,0:27:81.25:0,81,1173	0/0:29,0:29:87.25:0,87,1243	0/0:39,0:39:99:0,117,1711	0/0:23,0:23:69.23:0,69,1031	0/0:19,0:19:54.18:0,54,807	0/0:20,0:20:60.17:0,60,839	0/0:35,0:35:99:0,105,1571	0/0:15,0:15:39.12:0,39,565	0/0:21,0:21:49.83:0,50,783	0/0:37,0:37:99:0,111,1622	0/0:25,0:25:75.25:0,75,1122	0/0:23,0:23:66.21:0,66,955	0/0:33,0:32:99:0,99,1423	0/0:11,0:11:33.11:0,33,494
chr10	14168779	.	G	GCTTAGGCCT	5677.46	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-6.447;DP=835;FS=1.964;HRun=0;HaplotypeScore=219.2282;InbreedingCoeff=0.9999;MQ=79.79;MQ0=0;MQRankSum=-10.140;QD=99.60;ReadPosRankSum=-2.144;VQSLOD=4.8397;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,163,4874	0/0:20,0:20:60.11:0,60,1514	0/0:29,0:29:71.38:0,71,1945	0/0:21,0:21:47.43:0,47,1251	0/0:27,0:27:78.67:0,79,2238	1/1:0,17:21:51.18:2426,51,0	1/1:8,18:36:75.26:3251,75,0	0/0:36,0:36:99:0,105,2838	0/0:34,0:34:99:0,99,3069	0/0:24,0:24:69.23:0,69,2077	0/0:21,0:21:57.15:0,57,1528	0/0:34,0:34:99:0,102,2981	0/0:25,0:25:75.26:0,75,2262	0/0:35,0:35:99:0,105,3181	0/0:37,0:37:99:0,111,3239	0/0:39,0:39:99:0,111,3278	0/0:33,0:33:90.31:0,90,2687	0/0:17,0:17:51.18:0,51,1534	0/0:12,0:12:36.12:0,36,1117	0/0:24,0:24:72.20:0,72,2007	0/0:59,0:59:99:0,166,4787	0/0:26,0:26:73.49:0,73,2185	0/0:21,0:21:57.13:0,57,1445	0/0:34,0:34:99:0,102,2950	0/0:27,0:27:75.26:0,75,2321	0/0:34,0:34:99:0,102,3052	0/0:38,0:38:99:0,114,3238	0/0:16,0:16:45.15:0,45,1396
chr10	14171040	.	G	GAA	1375.30	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-6.151;DP=623;FS=0.620;HRun=10;HaplotypeScore=82.6102;InbreedingCoeff=0.9817;MQ=77.25;MQ0=2;MQRankSum=0.727;QD=28.07;ReadPosRankSum=-0.796;VQSLOD=3.6863;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,102,1037	0/0:5,0:5:12.03:0,12,122	0/0:22,0:19:26.89:0,27,245	0/0:18,0:16:22.30:0,22,156	0/0:32,0:33:83.82:0,84,804	1/1:3,19:23:47.57:637,48,0	1/1:3,21:25:59.69:860,60,0	0/0:30,0:30:72.09:0,72,725	0/0:18,0:18:48.08:0,48,488	0/0:22,0:22:51.04:0,51,509	0/0:18,0:18:48.01:0,48,476	0/0:20,0:21:56.82:0,57,540	0/0:22,0:23:56.76:0,57,538	0/0:26,0:27:56.80:0,57,621	0/0:29,0:30:74.86:0,75,744	0/0:30,0:31:68.51:0,69,664	0/0:23,0:23:63.09:0,63,623	0/0:23,0:23:60.12:0,60,610	0/0:17,0:16:44.69:0,45,417	0/0:18,0:19:44.79:0,45,496	0/0:16,0:15:29.94:0,30,290	0/0:23,0:23:56.70:0,57,566	0/0:17,0:18:41.78:0,42,402	0/0:18,0:19:41.88:0,42,470	0/0:18,0:18:51.11:0,51,519	0/0:14,0:14:36.08:0,36,366	0/0:30,0:30:75.05:0,75,745	0/0:17,0:17:32.94:0,33,319
chr10	14174294	.	G	GTTTT	5005.53	PASS	AB=0.963;AC=40;AF=0.714;AN=56;BaseQRankSum=2.462;DP=452;FS=3.633;HRun=17;HaplotypeScore=111.5058;InbreedingCoeff=0.3824;MQ=58.00;MQ0=2;MQRankSum=-4.968;QD=12.30;ReadPosRankSum=-5.773;VQSLOD=-0.1686;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:28:14.80:15,0,273	1/1:1,2:4:12.04:186,12,0	0/1:15,0:10:3.56:4,0,63	0/1:8,0:6:2.80:3,0,17	1/1:22,2:26:39.14:497,39,0	0/1:20,0:21:16.57:25,0,17	0/1:10,0:11:36.20:48,0,36	1/1:33,0:32:44.14:501,44,0	1/1:6,10:17:14.41:186,14,0	1/1:22,0:21:49.16:526,49,0	1/1:16,0:16:28.54:316,29,0	0/1:5,0:5:1.49:1,0,33	0/1:13,0:13:7.04:7,0,138	0/0:15,0:16:19.30:0,19,165	1/1:10,0:10:17.36:124,17,0	1/1:9,0:9:12.58:117,13,0	1/1:8,1:17:6.02:115,6,0	1/1:27,0:26:41.30:379,41,0	1/1:15,0:15:32.99:397,33,0	1/1:14,0:13:23.98:267,24,0	1/1:8,0:8:10.78:103,11,0	0/0:9,0:9:12.47:0,12,168	0/0:8,0:9:6.99:0,7,91	0/0:9,0:9:20.95:0,21,213	0/1:10,0:14:17.38:17,0,103	1/1:10,16:28:61.42:752,61,0	1/1:10,1:19:12.04:180,12,0	1/1:21,0:21:29.58:240,30,0
chr10	14174295	.	T	TTC	442.27	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=1.175;DP=451;FS=19.473;HRun=0;HaplotypeScore=111.6893;InbreedingCoeff=0.5091;MQ=56.65;MQ0=3;MQRankSum=-2.014;QD=5.20;ReadPosRankSum=0.855;VQSLOD=1.8606;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:65.28:0,65,697	0/0:4,0:4:0.93:0,1,5	0/0:14,0:9:23.96:0,24,249	0/0:9,0:6:17.61:0,18,155	0/0:26,0:26:20.47:0,20,255	1/1:5,14:21:11.46:239,11,0	1/1:7,4:11:26.84:315,27,0	0/0:33,0:32:55.50:0,55,399	0/1:17,0:17:3.86:4,0,43	0/0:22,0:21:33.73:0,34,205	0/0:16,0:16:33.40:0,33,220	0/0:5,0:5:8.71:0,9,102	0/0:13,0:13:29:0,29,297	0/0:17,0:17:36.47:0,36,393	0/0:9,0:9:17.59:0,18,106	0/0:9,0:9:19.48:0,19,136	0/0:18,0:17:9.44:0,9,103	0/0:29,0:26:10.55:0,11,163	0/1:16,0:15:5.05:5,0,117	0/0:13,0:12:9.34:0,9,105	0/0:7,0:7:5.39:0,5,29	0/0:9,0:9:27.05:0,27,322	0/0:9,0:9:23.95:0,24,243	0/0:11,0:9:24.07:0,24,328	0/0:14,0:14:31.77:0,32,316	0/0:29,0:28:37.05:0,37,271	0/1:20,0:19:0.04:0,0,79	0/0:21,0:21:32.47:0,32,259
chr10	14175244	.	G	GAT	2362.02	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=-8.936;DP=794;FS=2.485;HRun=0;HaplotypeScore=88.7891;InbreedingCoeff=0.7834;MQ=74.26;MQ0=0;MQRankSum=0.110;QD=29.90;ReadPosRankSum=0.968;VQSLOD=4.8945;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:57.15:0,57,716	0/0:10,0:10:27.09:0,27,346	0/0:18,0:17:18.05:0,18,216	0/1:15,0:15:14.48:14,0,165	0/0:36,0:36:96.29:0,96,1219	1/1:1,22:25:60.21:1012,60,0	1/1:5,34:39:87.30:1464,87,0	0/0:51,0:51:99:0,123,1482	0/0:24,0:24:63.13:0,63,737	0/0:43,0:43:99:0,120,1471	0/0:25,0:25:50.24:0,50,886	0/0:30,0:30:72.21:0,72,898	0/0:27,0:27:72.20:0,72,897	0/0:23,0:23:57:0,57,695	0/0:43,0:43:99:0,120,1529	0/0:42,0:42:99:0,123,1554	0/0:24,0:24:66.21:0,66,848	0/0:14,0:14:33.06:0,33,393	0/0:19,0:19:45.11:0,45,549	0/0:43,0:43:99:0,108,1359	0/0:42,0:42:99:0,117,1460	0/0:24,0:24:66.21:0,66,849	0/0:31,0:31:75.16:0,75,890	0/0:19,0:19:51.14:0,51,639	0/0:23,0:23:66.21:0,66,849	0/0:40,0:40:99:0,111,1405	0/0:20,0:19:60.19:0,60,771	0/0:23,0:23:69.22:0,69,887
chr10	14176043	.	G	GC	11545.64	PASS	AC=36;AF=0.692;AN=52;BaseQRankSum=-2.551;DP=484;FS=4.977;HRun=2;HaplotypeScore=56.0970;InbreedingCoeff=0.9939;MQ=47.78;MQ0=17;MQRankSum=-7.678;QD=36.08;ReadPosRankSum=-0.954;VQSLOD=4.9057;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:78.03:0,78,942	1/1:1,7:8:21.07:300,21,0	./.	./.	1/1:1,34:32:81.27:1163,81,0	1/1:1,13:14:33.11:467,33,0	1/1:0,14:14:33.11:469,33,0	1/1:4,22:26:63.21:905,63,0	1/1:1,11:11:27.08:370,27,0	1/1:1,24:25:72.24:1031,72,0	1/1:3,20:22:48.16:681,48,0	0/0:25,1:26:29.06:0,29,777	0/0:13,0:13:33.53:0,34,392	0/0:10,0:10:30.09:0,30,371	1/1:0,11:11:33.11:475,33,0	1/1:1,14:15:39.13:545,39,0	1/1:2,12:14:39.13:542,39,0	1/1:3,6:9:24.08:340,24,0	1/1:1,21:22:63.21:906,63,0	1/1:2,19:20:57.15:775,57,0	1/1:1,13:14:36.12:518,36,0	0/0:15,0:14:36.11:0,36,444	0/0:11,0:11:27.07:0,27,321	0/0:12,0:12:13.12:0,13,352	0/0:15,0:15:39.10:0,39,460	1/1:2,18:20:51.17:728,51,0	1/1:2,21:20:54.18:770,54,0	1/1:0,14:14:39.13:561,39,0
chr10	14176067	.	GA	G	1803.41	PASS	AB=0.773;AC=29;AF=0.518;AN=56;BaseQRankSum=6.458;DP=483;FS=1.584;HRun=15;HaplotypeScore=83.6105;InbreedingCoeff=0.3522;MQ=52.62;MQ0=4;MQRankSum=-4.339;QD=5.48;ReadPosRankSum=3.078;VQSLOD=2.8747;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,2:30:9.28:0,9,311	1/1:0,3:5:12.94:69,13,0	0/0:14,1:6:8.14:0,8,52	0/0:15,0:6:5.24:0,5,25	0/1:19,12:32:23.11:140,0,23	0/0:13,1:14:7.72:0,8,188	0/0:10,0:10:11.94:0,12,95	1/1:11,4:15:14.64:96,15,0	0/1:5,4:9:17.96:31,0,18	1/1:16,7:26:29.48:170,29,0	1/1:11,7:18:26.46:171,26,0	0/0:17,1:19:6.86:0,7,203	0/0:20,0:20:32.87:0,33,261	0/0:13,0:13:7.66:0,8,171	0/1:5,8:13:8.67:78,0,9	1/1:3,13:17:30.61:196,31,0	1/1:6,10:16:26.57:171,27,0	0/1:7,5:13:4.65:97,0,5	1/1:12,2:15:16.59:101,17,0	1/1:8,15:23:7.75:163,8,0	0/1:15,2:18:30.40:58,0,30	0/1:12,3:15:18.39:18,0,126	0/1:16,1:18:1.73:2,0,213	0/1:11,1:11:1.27:1,0,114	0/0:16,0:16:13.82:0,14,237	1/1:7,5:13:15.49:97,15,0	1/1:5,20:23:23:268,23,0	0/1:12,4:17:15.71:67,0,16
chr10	14177941	.	GTGTA	G	2195.90	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=9.056;DP=788;FS=6.852;HRun=0;HaplotypeScore=126.0519;InbreedingCoeff=0.7805;MQ=83.60;MQ0=0;MQRankSum=-4.641;QD=30.93;ReadPosRankSum=-0.135;VQSLOD=3.4106;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,163,4317	0/0:14,0:14:36.12:0,36,947	0/0:31,0:31:71.58:0,72,1556	0/1:17,0:17:29.92:30,0,846	0/0:30,0:30:87.30:0,87,2308	1/1:1,30:31:81.28:1511,81,0	1/1:2,21:23:42.62:785,43,0	0/0:35,0:35:96.26:0,96,2343	0/0:25,0:25:69.24:0,69,1826	0/0:32,0:32:96.32:0,96,2505	0/0:16,0:16:45.15:0,45,1185	0/0:32,0:32:93.31:0,93,2407	0/0:20,0:20:60.21:0,60,1599	0/0:27,0:27:78.27:0,78,2078	0/0:41,0:41:99:0,120,3060	0/0:33,0:33:99:0,99,2559	0/0:22,0:22:66.23:0,66,1744	0/0:20,0:20:57.20:0,57,1518	0/0:24,0:24:72.25:0,72,1900	0/0:26,0:26:72.25:0,72,1883	0/0:31,0:31:87.30:0,87,2303	0/0:37,0:37:99:0,102,2702	0/0:25,0:25:69.24:0,69,1829	0/0:29,0:27:84.24:0,84,2097	0/0:21,0:21:54.16:0,54,1382	0/0:33,0:33:96.33:0,96,2519	0/0:46,0:45:99:0,132,3457	0/0:12,0:12:36.12:0,36,958
chr10	14179484	.	G	GA	1178.48	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-5.705;DP=667;FS=5.208;HRun=7;HaplotypeScore=67.3017;InbreedingCoeff=0.9441;MQ=73.77;MQ0=0;MQRankSum=-2.272;QD=26.19;ReadPosRankSum=-0.640;VQSLOD=4.0736;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:77.72:0,78,753	0/0:4,0:4:6.01:0,6,58	0/0:8,0:9:17.67:0,18,133	0/0:25,0:25:44.26:0,44,417	0/0:27,0:27:69.10:0,69,661	1/1:0,17:17:45.14:542,45,0	1/1:2,26:28:63.19:757,63,0	0/0:27,0:27:69.10:0,69,661	0/0:25,0:26:65.94:0,66,622	0/0:18,0:18:48.07:0,48,460	0/0:12,0:12:33.05:0,33,319	0/0:30,0:30:81.13:0,81,781	0/0:25,0:25:75.12:0,75,724	0/0:37,0:37:96.14:0,96,926	0/0:36,0:36:99:0,99,950	0/0:25,0:25:75.12:0,75,723	0/0:23,0:22:51.08:0,51,492	0/0:26,0:26:75.12:0,75,723	0/0:19,0:19:49.89:0,50,469	0/0:22,0:22:60.09:0,60,579	0/0:20,0:20:60.10:0,60,579	0/0:24,0:24:66.10:0,66,637	0/0:25,0:25:72.12:0,72,695	0/0:33,0:33:87.13:0,87,840	0/0:19,0:19:45.06:0,45,434	0/0:36,0:35:96.15:0,96,927	0/0:29,0:29:78.12:0,78,753	0/0:12,0:11:36.06:0,36,347
chr10	14179615	.	CAG	C	945.96	PASS	AC=12;AF=1.000;AN=12;DP=124;FS=0.000;HRun=0;HaplotypeScore=42.5087;MQ=18.91;MQ0=76;QD=16.03;VQSLOD=3.1085;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,0:4:0.47:1,0,0	./.	./.	./.	./.	1/1:5,0:1:2.98:21,3,0	./.	./.	./.	./.	./.	1/1:6,7:10:18.06:248,18,0	1/1:2,6:7:21.07:303,21,0	1/1:1,10:10:28.34:396,28,0	./.	./.	./.	./.	./.	./.	./.	./.	./.	1/1:10,6:10:4.84:46,5,0	./.	./.	./.	./.
chr10	14179648	.	A	AG	485.18	PASS	AB=1.000;AC=16;AF=0.571;AN=28;BaseQRankSum=0.400;DP=245;FS=6.777;HRun=1;HaplotypeScore=48.3942;InbreedingCoeff=0.4011;MQ=23.30;MQ0=148;MQRankSum=1.299;QD=4.85;ReadPosRankSum=-1.759;VQSLOD=-0.2974;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	./.	0/0:10,0:1:1.25:0,1,3	./.	./.	1/1:8,0:4:12.02:141,12,0	1/1:3,0:1:3:27,3,0	1/1:3,0:2:6.01:67,6,0	0/0:21,0:12:21.07:0,21,272	0/0:12,0:4:6.91:0,7,79	0/0:21,0:13:26.88:0,27,292	1/1:3,1:3:3:27,3,0	1/1:3,1:1:2.94:18,3,0	1/1:6,5:7:11.99:153,12,0	0/1:16,0:8:59.88:93,0,60	./.	./.	1/1:47,0:4:3.48:45,3,0	./.	./.	0/0:29,0:16:17.64:0,18,179	./.	0/1:4,0:2:25.73:34,0,26	./.	./.
chr10	14180037	.	AAAAC	A	4660.37	PASS	AB=0.999;AC=20;AF=0.357;AN=56;BaseQRankSum=-11.892;DP=620;FS=3.623;HRun=0;HaplotypeScore=134.3130;InbreedingCoeff=-0.2847;MQ=54.86;MQ0=16;MQRankSum=0.780;QD=12.04;ReadPosRankSum=-10.082;VQSLOD=1.4621;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:84.27:0,84,1639	0/1:10,0:10:43.33:43,0,183	0/0:24,0:4:12.01:0,12,122	0/0:47,0:16:1.38:0,1,221	0/1:26,0:25:99:333,0,458	1/1:10,7:16:15.39:466,15,0	1/1:9,10:19:8.71:238,9,0	0/1:31,0:29:40.42:663,0,40	0/1:19,0:19:99:269,0,383	0/1:23,0:23:99:139,0,533	0/1:19,0:18:99:154,0,253	0/0:21,0:21:37.25:0,37,981	0/0:25,0:25:69.22:0,69,1453	0/0:23,0:23:63.20:0,63,1251	0/1:23,0:23:99:238,0,491	0/1:19,0:19:99:200,0,293	0/1:41,1:41:99:317,0,998	0/1:19,0:18:99:140,0,484	0/1:24,0:23:99:227,0,251	0/1:24,0:24:99:289,0,529	0/1:4,0:4:69.49:69,0,69	0/0:7,0:7:18.06:0,18,342	0/0:14,0:14:39.13:0,39,897	0/0:23,0:23:63.20:0,63,1311	0/0:18,0:18:48.11:0,48,987	0/1:29,0:29:99:454,0,495	0/1:28,0:26:99:169,0,650	0/1:11,0:11:99:252,0,100
chr10	14180041	.	C	CA	12708.54	PASS	AB=0.736;AC=34;AF=0.607;AN=56;BaseQRankSum=-0.512;DP=649;FS=3.458;HRun=4;HaplotypeScore=85.0970;InbreedingCoeff=0.8574;MQ=58.69;MQ0=16;MQRankSum=2.552;QD=30.62;ReadPosRankSum=0.259;VQSLOD=5.0391;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:87.21:0,87,964	1/1:1,9:10:21.07:287,21,0	0/0:28,0:6:10.53:0,11,113	0/0:48,0:18:10.63:0,11,232	1/1:1,26:27:75.25:1025,75,0	0/1:16,2:17:1.33:91,0,1	1/1:18,0:18:8.95:48,9,0	1/1:4,28:30:73.32:969,73,0	1/1:1,18:19:54.18:738,54,0	1/1:2,26:28:73.98:999,74,0	1/1:5,14:18:42.14:563,42,0	0/0:20,0:20:56.75:0,57,622	0/0:23,0:24:65.22:0,65,719	0/0:21,0:21:60.17:0,60,680	1/1:1,22:23:60.20:820,60,0	1/1:0,20:20:45.15:616,45,0	1/1:2,40:41:99:1520,112,0	0/1:5,15:19:14.86:554,0,15	1/1:9,19:27:37.43:688,37,0	1/1:2,24:26:72.24:972,72,0	1/1:0,6:6:12.04:164,12,0	0/0:8,0:8:24.04:0,24,254	0/0:14,0:14:33.09:0,33,373	0/0:22,0:22:54.15:0,54,613	0/0:18,0:18:45.13:0,45,510	1/1:1,31:32:93.31:1263,93,0	1/1:4,29:31:72.71:984,73,0	1/1:4,10:14:30.10:407,30,0
chr10	14180050	.	AAC	A	287.12	PASS	AB=0.800;AC=3;AF=0.054;AN=56;BaseQRankSum=6.031;DP=656;FS=0.883;HRun=0;HaplotypeScore=137.5748;InbreedingCoeff=-0.0545;MQ=60.67;MQ0=10;MQRankSum=-4.608;QD=4.63;ReadPosRankSum=-1.647;VQSLOD=2.8313;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:84.27:0,84,1446	0/0:8,0:8:18.09:0,18,353	0/1:27,0:8:8.25:8,0,268	0/0:43,0:21:26.02:0,26,596	0/0:28,0:28:83.87:0,84,1346	0/1:10,8:17:99:173,0,135	0/1:10,7:17:99:202,0,129	0/0:32,0:31:84.27:0,84,1398	0/0:19,0:19:57.18:0,57,973	0/0:34,0:34:96.31:0,96,1608	0/0:17,0:17:48.14:0,48,803	0/0:20,0:20:57.16:0,57,972	0/0:24,0:24:72.18:0,72,1142	0/0:22,0:22:66.21:0,66,1134	0/0:24,0:24:69.22:0,69,1184	0/0:16,0:16:45.12:0,45,734	0/0:45,0:44:99:0,120,2028	0/0:19,0:19:57.02:0,57,902	0/0:32,0:31:83.98:0,84,1147	0/0:27,0:27:81.26:0,81,1375	0/0:9,0:9:21.07:0,21,359	0/0:12,0:12:36.12:0,36,617	0/0:13,0:13:39.03:0,39,615	0/0:23,0:23:66.20:0,66,1105	0/0:17,0:17:48.11:0,48,798	0/0:37,0:37:99:0,105,1769	0/0:31,0:30:80.06:0,80,1324	0/0:14,0:14:42.13:0,42,699
chr10	14180844	.	GA	G	9348.20	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=8.253;DP=507;FS=9.029;HRun=6;HaplotypeScore=51.9108;InbreedingCoeff=0.9972;MQ=80.37;MQ0=0;MQRankSum=-3.608;QD=27.10;ReadPosRankSum=1.996;VQSLOD=5.0133;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:66.21:0,66,868	1/1:0,7:7:18.05:193,18,0	0/0:18,0:18:44.90:0,45,534	0/0:10,0:10:24.07:0,24,302	1/1:5,26:31:72.18:774,72,0	1/1:0,20:20:60.15:645,60,0	1/1:0,12:12:27.07:290,27,0	1/1:4,21:25:63.12:665,63,0	1/1:0,12:12:30.08:322,30,0	1/1:2,18:20:54.12:572,54,0	1/1:1,15:16:36.09:387,36,0	0/0:15,0:15:39.13:0,39,513	0/0:19,0:19:54.08:0,54,656	0/0:16,0:16:42.11:0,42,523	1/1:0,18:18:54.14:580,54,0	1/1:3,12:15:33.08:355,33,0	1/1:2,17:19:48.12:516,48,0	1/1:0,8:8:21.05:226,21,0	1/1:4,17:21:51.09:535,51,0	1/1:5,15:20:45.11:484,45,0	1/1:2,16:18:39.10:419,39,0	0/0:8,0:8:24.08:0,24,316	0/0:13,0:13:36.11:0,36,461	0/0:17,0:17:42.12:0,42,538	0/0:22,0:22:57.18:0,57,737	1/1:3,29:32:87.22:935,87,0	1/1:1,23:24:57.14:613,57,0	1/1:1,26:27:78.20:838,78,0
chr10	14181454	.	CAT	C	4116.85	PASS	AB=1.000;AC=37;AF=0.661;AN=56;BaseQRankSum=8.844;DP=513;FS=1.781;HRun=0;HaplotypeScore=82.7365;InbreedingCoeff=0.7399;MQ=70.84;MQ0=34;MQRankSum=-0.882;QD=14.25;ReadPosRankSum=1.207;VQSLOD=3.6786;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:28:27.21:0,27,772	1/1:8,0:8:17.96:144,18,0	0/0:44,0:32:93.12:0,93,1410	0/0:36,0:22:60.02:0,60,860	1/1:9,0:8:0.42:65,0,0	1/1:12,0:11:32.90:261,33,0	1/1:33,0:30:70.99:584,71,0	1/1:7,0:7:20.91:172,21,0	1/1:12,0:11:29.92:239,30,0	1/1:6,8:11:23.11:200,23,0	1/1:7,0:6:14.98:124,15,0	0/1:21,0:21:31.11:31,0,707	0/0:30,0:30:9.69:0,10,944	0/0:18,0:18:24.14:0,24,691	1/1:11,1:11:32.75:259,33,0	1/1:10,0:10:23.91:188,24,0	1/1:20,0:18:41.38:329,41,0	1/1:15,0:12:18.49:135,18,0	1/1:8,0:5:12:106,12,0	1/1:15,0:15:38.62:280,39,0	1/1:27,0:25:52.06:400,52,0	0/0:13,0:13:27.03:0,27,379	0/0:17,0:15:33.03:0,33,525	0/0:35,0:34:51.90:0,52,1077	0/1:22,0:21:1.76:2,0,599	0/1:18,0:16:38.45:254,0,38	1/1:11,0:10:23.58:199,24,0	1/1:8,0:6:17.96:145,18,0
chr10	14184321	.	A	AAAAAC	1708.26	PASS	AB=0.981;AC=5;AF=0.089;AN=56;BaseQRankSum=-4.709;DP=708;FS=1.633;HRun=0;HaplotypeScore=125.5035;InbreedingCoeff=0.7738;MQ=72.20;MQ0=6;MQRankSum=-0.934;QD=17.61;ReadPosRankSum=-2.416;VQSLOD=2.7802;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:75.23:0,75,1332	0/0:8,0:8:18.06:0,18,335	0/0:40,0:25:26.12:0,26,423	0/1:50,0:30:21.32:21,0,384	0/0:33,0:33:69.22:0,69,1251	1/1:6,16:24:48.16:1321,48,0	1/1:14,7:22:18.06:494,18,0	0/0:36,0:36:57.19:0,57,1003	0/0:17,0:17:36.12:0,36,651	0/0:40,0:40:93.31:0,93,1698	0/0:23,0:23:48.15:0,48,856	0/0:18,0:18:30.09:0,30,520	0/0:15,0:15:33.10:0,33,584	0/0:15,0:15:30.10:0,30,558	0/0:25,0:25:45.15:0,45,836	0/0:27,0:27:63.19:0,63,1110	0/0:26,0:26:51.17:0,51,934	0/0:19,0:19:36.08:0,36,669	0/0:23,0:23:36.09:0,36,640	0/0:31,0:31:75.26:0,75,1391	0/0:14,0:14:33.11:0,33,613	0/0:26,0:26:48.16:0,48,886	0/0:19,0:19:42.14:0,42,765	0/0:19,0:19:39.11:0,39,660	0/0:25,0:25:45.15:0,45,837	0/0:26,0:26:63.21:0,63,1141	0/0:26,0:26:51.17:0,51,948	0/0:28,0:28:69.24:0,69,1281
chr10	14185441	.	G	GTCCCCAGC	3851.45	PASS	AB=0.974;AC=6;AF=0.107;AN=56;BaseQRankSum=1.098;DP=543;FS=0.644;HRun=0;HaplotypeScore=141.0107;InbreedingCoeff=0.6071;MQ=62.01;MQ0=10;MQRankSum=-8.175;QD=48.75;ReadPosRankSum=-1.910;VQSLOD=2.9438;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:71.42:0,71,1813	0/0:7,0:7:18.06:0,18,480	0/0:27,0:19:25.97:0,26,1103	0/0:29,0:19:31.32:0,31,685	0/0:21,0:21:57.20:0,57,1536	1/1:7,10:17:48.16:2000,48,0	1/1:13,7:19:48.10:1609,48,0	0/0:14,0:14:33.08:0,33,859	0/0:17,0:17:27.09:0,27,764	0/0:25,0:25:72.25:0,72,2008	0/0:14,0:14:36.12:0,36,1018	0/0:27,0:27:78.27:0,78,2098	0/0:18,0:18:51.18:0,51,1397	0/0:13,0:13:33.10:0,33,834	0/0:28,0:28:51.18:0,51,1443	0/0:23,0:23:48.16:0,48,1359	0/1:23,0:23:99:143,0,1565	0/1:17,1:18:99:99,0,814	0/0:14,0:13:36.12:0,36,982	0/0:20,0:20:60.16:0,60,1620	0/0:14,0:14:9.03:0,9,222	0/0:15,0:15:39.13:0,39,1063	0/0:14,0:14:39.13:0,39,1054	0/0:29,0:28:84.26:0,84,2314	0/0:15,0:15:39.13:0,39,1053	0/0:14,0:14:36.12:0,36,875	0/0:18,0:18:27.09:0,27,755	0/0:7,0:7:18.06:0,18,508
chr10	14185463	.	G	GAA	5493.44	PASS	AB=0.689;AC=35;AF=0.625;AN=56;BaseQRankSum=-2.172;DP=611;FS=22.938;HRun=13;HaplotypeScore=90.0159;InbreedingCoeff=0.7335;MQ=58.92;MQ0=5;MQRankSum=-1.577;QD=13.63;ReadPosRankSum=-2.394;VQSLOD=1.3245;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:31:29:0,29,396	0/1:2,5:7:17.82:43,0,18	0/0:26,0:11:17.53:0,18,136	0/0:29,0:16:21.97:0,22,145	1/1:9,17:27:47.12:409,47,0	1/1:5,7:17:34.11:360,34,0	1/1:10,10:19:22.26:252,22,0	1/1:11,9:22:30.83:294,31,0	1/1:5,10:15:11.93:122,12,0	1/1:12,19:34:52.17:516,52,0	1/1:2,10:15:11.43:196,11,0	0/0:25,0:25:35.33:0,35,299	0/0:20,0:21:44.44:0,44,410	0/0:13,0:13:7.92:0,8,119	1/1:9,26:37:23.55:269,24,0	1/1:3,21:26:39.04:494,39,0	1/1:20,4:24:33.80:562,34,0	0/1:8,17:25:8.02:231,0,8	1/1:5,14:19:45.91:488,46,0	1/1:18,3:22:44.55:451,45,0	1/1:0,15:15:5.97:60,6,0	0/0:16,0:16:20.77:0,21,224	0/0:14,0:16:17.39:0,17,246	0/0:30,0:29:37.93:0,38,463	0/1:14,1:16:44.58:45,0,222	1/1:6,13:22:40.79:392,41,0	1/1:3,23:29:25.38:244,25,0	1/1:4,0:9:8.50:66,9,0
chr10	14186894	.	C	CT	4361.61	PASS	AB=0.701;AC=33;AF=0.589;AN=56;BaseQRankSum=-5.835;DP=671;FS=0.400;HRun=14;HaplotypeScore=90.7991;InbreedingCoeff=0.3948;MQ=71.99;MQ0=2;MQRankSum=-1.187;QD=8.88;ReadPosRankSum=-1.969;VQSLOD=3.7073;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,1:37:23.30:0,23,278	0/1:3,5:9:10.42:32,0,10	0/0:19,0:17:5.76:0,6,46	0/1:11,1:12:20.87:21,0,21	1/1:10,27:37:2.91:332,3,0	0/1:8,10:18:10.37:78,0,10	1/1:16,6:24:15.08:242,15,0	0/1:17,8:26:23.13:164,0,23	0/1:3,19:22:20.54:88,0,21	1/1:11,18:29:47.99:422,48,0	1/1:6,10:17:29.69:228,30,0	0/0:15,0:18:14.47:0,14,166	0/0:20,0:20:37.73:0,38,237	0/0:25,0:25:44.06:0,44,284	1/1:5,13:20:13.33:211,13,0	1/1:9,18:28:16.50:247,16,0	0/1:11,25:37:20.87:304,0,21	1/1:4,21:26:29.82:248,30,0	1/1:18,18:38:23.11:366,23,0	1/1:14,15:31:21.80:307,22,0	1/1:4,7:12:1.72:137,2,0	0/1:21,4:26:28.24:28,0,209	0/0:17,3:21:7.29:0,7,156	0/0:17,0:18:43.05:0,43,272	0/0:15,4:20:8.14:0,8,170	1/1:17,18:35:23.42:303,23,0	1/1:8,25:33:53.99:475,54,0	1/1:3,6:9:14.98:128,15,0
chr10	14187998	.	A	ATTTTATTTTATT	8356.37	PASS	AB=0.820;AC=29;AF=0.537;AN=54;BaseQRankSum=1.841;DP=403;FS=1.729;HRun=0;HaplotypeScore=127.1929;InbreedingCoeff=0.6405;MQ=51.17;MQ0=14;MQRankSum=-7.886;QD=38.51;ReadPosRankSum=-2.735;VQSLOD=3.7502;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:24.05:0,24,1495	1/1:0,4:8:3.01:181,3,0	0/0:36,0:7:14.56:0,15,144	0/0:37,0:16:24.25:0,24,597	1/1:6,6:19:6.49:250,6,0	0/1:17,0:16:51.63:110,0,52	0/0:1,0:1:1.25:0,1,3	1/1:25,0:26:51.92:1203,52,0	1/1:1,3:5:7.27:365,7,0	1/1:4,8:20:48.47:1276,48,0	1/1:2,5:9:6.02:250,6,0	0/0:13,0:13:17.04:0,17,391	0/0:10,0:10:21.07:0,21,649	0/0:15,0:15:30.94:0,31,859	1/1:0,0:3:3.01:81,3,0	0/1:6,0:6:7.94:389,0,8	0/1:5,8:14:9.92:177,0,10	1/1:1,0:4:8.98:226,9,0	1/1:7,5:17:5.47:897,5,0	1/1:5,0:5:12.01:194,12,0	./.	0/0:11,0:11:20.98:0,21,538	0/0:11,0:11:19.55:0,20,566	0/0:11,0:11:17.88:0,18,558	0/0:13,0:13:29.27:0,29,940	1/1:4,11:16:30.09:1241,30,0	1/1:5,9:18:22.48:1269,22,0	1/1:11,0:13:16.49:247,16,0
chr10	14188002	.	T	TA	561.91	PASS	AB=0.984;AC=17;AF=0.315;AN=54;BaseQRankSum=5.579;DP=394;FS=1.322;HRun=0;HaplotypeScore=65.2453;InbreedingCoeff=0.0593;MQ=47.97;MQ0=25;MQRankSum=-3.114;QD=3.00;ReadPosRankSum=2.910;VQSLOD=2.5627;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:24:59.98:0,60,744	1/1:7,0:6:2.59:10,3,0	0/0:36,0:6:14.93:0,15,162	0/0:38,0:15:22.48:0,22,347	0/1:15,0:14:5.07:5,0,15	0/0:18,0:17:44.92:0,45,313	0/0:1,0:1:1.25:0,1,3	0/1:29,4:27:99:279,0,166	0/1:7,0:6:7.99:8,0,28	0/1:20,0:17:22.62:23,0,92	1/1:9,0:8:5.60:42,6,0	0/0:12,0:12:28.70:0,29,288	0/0:10,0:10:21.06:0,21,293	0/0:14,0:14:41.94:0,42,503	0/0:3,0:3:2.50:0,2,9	0/1:7,0:6:36.76:59,0,37	0/1:15,0:11:1.29:5,0,1	0/1:5,0:4:15.49:15,0,20	0/1:17,0:15:64.87:69,0,65	1/1:5,0:5:11.94:104,12,0	./.	0/0:11,0:11:24.02:0,24,295	0/0:10,0:10:23.97:0,24,303	0/0:11,0:11:18.14:0,18,252	0/0:13,0:13:30.07:0,30,404	0/1:16,0:14:25.21:51,0,25	0/1:17,0:16:18.70:42,0,19	0/1:13,1:13:1.43:1,0,115
chr10	14189179	.	TA	T	1285.25	PASS	AB=0.800;AC=32;AF=0.571;AN=56;BaseQRankSum=1.391;DP=499;FS=13.218;HRun=18;HaplotypeScore=81.2092;InbreedingCoeff=0.2541;MQ=78.49;MQ0=9;MQRankSum=-0.622;QD=4.00;ReadPosRankSum=4.037;VQSLOD=-0.5845;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:23:14.43:0,14,195	1/1:3,2:6:7.60:36,8,0	0/0:55,1:23:10.32:0,10,77	0/0:49,0:27:14.91:0,15,67	0/1:16,3:20:16.97:47,0,17	0/0:13,0:15:29.04:0,29,146	0/0:12,0:14:26.24:0,26,155	1/1:14,1:15:11.11:47,11,0	1/1:9,0:11:9.59:42,10,0	1/1:4,4:9:19.06:94,19,0	0/1:10,7:19:15.38:75,0,15	0/0:7,0:7:8.97:0,9,68	0/0:11,0:13:17.76:0,18,126	0/1:14,4:21:10.54:11,0,69	0/1:10,2:13:17.60:79,0,18	1/1:11,2:14:27.85:143,28,0	1/1:11,3:16:25.48:118,25,0	1/1:6,4:12:21.08:102,21,0	0/1:11,3:14:1.63:46,0,2	1/1:11,8:22:31.19:150,31,0	1/1:10,4:14:22.53:119,23,0	0/1:6,2:8:19.14:19,0,31	0/1:13,0:15:17.06:17,0,85	0/1:8,2:10:12.27:12,0,72	0/1:8,4:13:38.39:38,0,58	1/1:12,3:18:3.84:89,4,0	0/1:18,2:25:12.21:71,0,12	1/1:16,5:24:25.50:121,26,0
chr10	14189202	.	T	TC	6768.46	PASS	AB=0.813;AC=36;AF=0.643;AN=56;BaseQRankSum=-2.255;DP=535;FS=4.116;HRun=7;HaplotypeScore=84.2229;InbreedingCoeff=0.8034;MQ=74.61;MQ0=15;MQRankSum=-1.739;QD=19.23;ReadPosRankSum=2.093;VQSLOD=4.5741;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:45.01:0,45,415	1/1:5,0:5:6.02:68,6,0	0/0:73,0:28:25.59:0,26,286	0/1:60,0:28:4.51:5,0,41	1/1:6,7:13:30.08:350,30,0	1/1:3,7:10:18.06:217,18,0	1/1:4,20:24:45.61:544,46,0	1/1:10,15:24:45.13:525,45,0	1/1:7,3:10:25.76:251,26,0	0/1:4,5:9:10.99:145,0,11	1/1:9,11:20:24.03:274,24,0	0/0:10,0:10:29.25:0,29,262	0/0:13,0:13:27.33:0,27,240	0/0:16,0:16:4.77:0,5,198	1/1:12,9:21:57.10:632,57,0	1/1:8,7:15:42.06:482,42,0	1/1:11,8:19:45.11:519,45,0	1/1:6,6:12:29.77:294,30,0	1/1:7,5:11:21.05:242,21,0	1/1:9,9:18:36.03:395,36,0	1/1:13,9:22:43.87:525,44,0	0/0:10,1:11:20.99:0,21,188	0/0:14,0:14:2.80:0,3,197	0/0:8,0:8:23.97:0,24,215	0/0:16,0:16:38.75:0,39,333	1/1:9,14:23:48.12:554,48,0	1/1:5,15:20:44.91:509,45,0	1/1:9,3:12:21.17:239,21,0
chr10	14195427	.	GATGT	G	2007.32	PASS	AC=32;AF=0.696;AN=46;BaseQRankSum=7.593;DP=778;FS=2.099;HRun=0;HaplotypeScore=162.1913;InbreedingCoeff=0.7888;MQ=63.13;MQ0=9;MQRankSum=-0.874;QD=4.28;ReadPosRankSum=-1.787;VQSLOD=2.6823;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:38.75:0,39,522	1/1:13,0:13:2.78:34,3,0	./.	./.	1/1:43,0:43:5.61:51,6,0	./.	./.	./.	1/1:29,0:29:15.04:170,15,0	1/1:30,0:31:20.92:187,21,0	1/1:24,0:24:2.48:34,2,0	0/0:28,0:28:33.05:0,33,585	0/0:26,0:26:42.01:0,42,607	0/0:33,0:33:27.05:0,27,438	1/1:37,0:37:10.89:94,11,0	1/1:41,0:41:15.04:170,15,0	0/0:25,0:23:2.93:0,3,20	1/1:15,0:15:3.01:34,3,0	1/1:26,0:26:14.89:117,15,0	1/1:29,0:30:8.95:80,9,0	1/1:31,0:31:17.20:132,17,0	0/0:26,0:26:33.04:0,33,525	1/1:13,20:33:21:320,21,0	1/1:18,16:34:15.05:229,15,0	0/0:31,0:31:33.04:0,33,501	1/1:38,0:38:20.97:343,21,0	1/1:35,0:35:9.03:103,9,0	1/1:9,0:9:9:83,9,0
chr10	14195475	.	TATGTATGC	T	5052.33	PASS	AB=0.555;AC=28;AF=0.583;AN=48;BaseQRankSum=4.391;DP=658;FS=10.469;HRun=0;HaplotypeScore=206.3819;InbreedingCoeff=0.7163;MQ=59.50;MQ0=11;MQRankSum=0.902;QD=12.76;ReadPosRankSum=-1.098;VQSLOD=2.9559;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:90.68:0,91,1486	1/1:0,7:7:2.59:83,3,0	./.	./.	1/1:4,29:33:5.81:151,6,0	./.	./.	1/1:44,0:41:69.30:642,69,0	1/1:2,24:26:15.05:418,15,0	1/1:3,19:22:53.88:585,54,0	1/1:0,23:23:5.50:100,5,0	0/0:31,0:31:44.04:0,44,1498	0/0:36,0:36:99:0,108,1700	0/0:24,0:24:27.05:0,27,722	0/1:4,28:31:14.42:186,0,14	1/1:2,40:41:15.05:418,15,0	0/0:5,17:20:2.93:0,3,20	0/1:4,11:14:12.71:78,0,13	1/1:5,11:14:29.86:316,30,0	1/1:3,28:31:9.03:191,9,0	1/1:33,0:32:24.14:536,24,0	0/0:24,0:24:69.04:0,69,1363	0/0:32,0:31:48:0,48,461	0/0:31,0:30:50.98:0,51,440	0/0:23,0:23:54.07:0,54,1134	1/1:4,30:34:62.71:854,63,0	1/1:4,26:29:9.03:251,9,0	1/1:6,2:7:17.97:242,18,0
chr10	14195479	.	T	TATGC	278.16	PASS	AC=2;AF=0.042;AN=48;BaseQRankSum=-3.829;DP=637;FS=0.000;HRun=0;HaplotypeScore=172.0128;InbreedingCoeff=0.4589;MQ=60.48;MQ0=10;MQRankSum=1.411;QD=9.93;ReadPosRankSum=2.286;VQSLOD=2.6725;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:71.91:0,72,677	0/0:7,0:7:2.82:0,3,28	0/0:1,0:1:1.25:0,1,3	./.	0/0:30,0:30:3:0,3,29	./.	./.	0/0:45,0:43:71.55:0,72,610	0/0:24,0:24:15.02:0,15,141	0/0:20,0:20:38.98:0,39,344	0/0:23,0:23:5.95:0,6,47	0/0:26,0:26:62.92:0,63,581	0/0:40,0:40:80.93:0,81,741	1/1:5,23:28:15.05:365,15,0	0/0:30,0:29:5.04:0,5,32	0/0:41,0:40:15.02:0,15,141	./.	0/0:13,0:12:3:0,3,28	0/0:14,0:13:11.82:0,12,87	0/0:29,0:29:6.01:0,6,66	0/0:33,0:32:59.89:0,60,490	0/0:25,0:25:56.96:0,57,584	0/0:32,0:31:51.01:0,51,497	0/0:34,0:33:59.96:0,60,559	0/0:19,0:19:32.99:0,33,345	0/0:30,0:30:47.87:0,48,392	0/0:28,0:27:9.01:0,9,85	0/0:8,0:7:11.96:0,12,97
chr10	14198807	.	CCA	C	21771.30	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=16.011;DP=869;FS=1.405;HRun=0;HaplotypeScore=109.9729;InbreedingCoeff=0.9999;MQ=86.45;MQ0=6;MQRankSum=-3.825;QD=43.63;ReadPosRankSum=4.180;VQSLOD=6.4529;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,126,2490	1/1:0,12:11:30.10:479,30,0	0/0:31,1:32:70.31:0,70,1613	0/0:25,0:25:58.30:0,58,1029	1/1:0,24:24:57.16:928,57,0	0/0:24,0:24:72.25:0,72,1462	0/0:40,0:40:99:0,120,2370	1/1:0,38:38:99:1814,114,0	1/1:0,20:19:54.18:881,54,0	1/1:0,34:34:99:1613,102,0	1/1:1,20:21:54.15:865,54,0	0/0:38,0:38:99:0,114,2229	0/0:30,0:30:90.31:0,90,1805	0/0:45,0:45:99:0,135,2666	1/1:0,36:35:99:1663,102,0	1/1:0,51:49:99:2104,129,0	1/1:0,32:32:96.33:1565,96,0	1/1:0,19:18:48.16:783,48,0	1/1:0,23:23:69.17:1046,69,0	1/1:0,23:23:57.19:929,57,0	1/1:1,64:65:99:2687,166,0	0/0:28,0:28:84.29:0,84,1705	0/0:18,0:18:51.16:0,51,1000	0/0:28,0:28:84.28:0,84,1647	0/0:20,0:20:57.20:0,57,1146	1/1:0,38:38:99:1775,111,0	1/1:0,43:43:99:1711,105,0	1/1:0,20:20:57.19:929,57,0
chr10	14199441	.	CT	C	11308.11	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=9.650;DP=672;FS=3.627;HRun=7;HaplotypeScore=70.6149;InbreedingCoeff=0.9991;MQ=76.62;MQ0=0;MQRankSum=-3.243;QD=25.41;ReadPosRankSum=1.304;VQSLOD=5.5760;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,144,1797	1/1:2,9:11:20.91:214,21,0	0/0:15,0:15:38.78:0,39,399	0/0:16,0:16:36.11:0,36,425	1/1:5,34:39:81.17:826,81,0	1/1:0,27:27:81.18:826,81,0	1/1:2,15:17:45.10:459,45,0	1/1:5,28:33:84.19:856,84,0	1/1:5,18:23:48.10:490,48,0	1/1:5,19:24:57.11:575,57,0	1/1:4,19:23:54.12:551,54,0	0/0:13,0:13:33.08:0,33,391	0/0:33,0:33:90.27:0,90,1114	0/0:15,0:14:39.12:0,39,491	1/1:2,17:19:45.10:459,45,0	1/1:2,27:29:72.63:735,73,0	1/1:3,30:32:81.18:826,81,0	1/1:1,10:11:30.06:306,30,0	1/1:4,23:28:71.17:702,71,0	1/1:2,25:27:75.16:765,75,0	1/1:2,11:13:30.07:306,30,0	0/0:18,0:18:48.15:0,48,604	0/0:17,0:17:51.13:0,51,615	0/0:26,0:26:72.23:0,72,904	0/0:23,0:23:63.19:0,63,780	1/1:0,31:31:93.20:943,93,0	1/1:4,30:34:84.19:857,84,0	1/1:3,20:23:60.13:612,60,0
chr10	14199574	.	CTT	C	2100.30	PASS	AB=0.720;AC=28;AF=0.500;AN=56;BaseQRankSum=3.054;DP=530;FS=3.165;HRun=17;HaplotypeScore=70.0122;InbreedingCoeff=0.1878;MQ=65.06;MQ0=3;MQRankSum=3.087;QD=6.14;ReadPosRankSum=6.226;VQSLOD=-0.3772;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:40:89:0,89,759	0/1:2,4:7:23.39:59,0,23	0/1:22,0:10:12.29:12,0,65	0/0:10,0:6:3:0,3,30	0/1:14,3:17:56.23:76,0,56	1/1:17,2:20:4.88:89,5,0	1/1:9,11:22:8.20:174,8,0	1/1:10,8:18:1.06:144,1,0	1/1:1,14:16:14.81:158,15,0	1/1:6,8:14:24.89:169,25,0	1/1:2,11:14:14.98:152,15,0	0/0:15,0:16:35.09:0,35,311	0/0:22,1:23:21.15:0,21,320	0/0:21,1:21:32.24:0,32,440	0/1:6,7:15:35.89:60,0,36	1/1:11,7:19:0.10:172,0,0	1/1:11,7:21:29.74:283,30,0	0/1:10,4:16:17.92:82,0,18	1/1:18,7:26:4.37:140,4,0	0/1:13,9:22:80.21:131,0,80	0/1:6,7:12:17.66:40,0,18	0/0:11,0:15:23.62:0,24,225	0/0:18,0:18:28.31:0,28,253	0/0:25,0:26:41.52:0,42,411	0/0:18,0:18:36.02:0,36,353	0/1:14,9:23:4.37:144,0,4	0/1:12,10:22:5.18:152,0,5	0/1:7,4:12:14.12:45,0,14
chr10	14201660	.	G	GGA	4031.48	PASS	AC=54;AF=1.000;AN=54;DP=341;FS=0.000;HRun=0;HaplotypeScore=392.5146;InbreedingCoeff=0.2115;MQ=36.42;MQ0=0;QD=11.82;VQSLOD=2.6880;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:19,1:20:23.38:210,23,0	1/1:3,2:5:7.83:69,8,0	1/1:3,0:2:2.74:12,3,0	./.	1/1:20,1:20:19.24:178,19,0	1/1:5,0:5:8.99:98,9,0	1/1:10,0:8:9.01:102,9,0	1/1:10,0:5:0.47:1,0,0	1/1:10,1:11:9:79,9,0	1/1:21,0:19:31.85:301,32,0	1/1:12,0:12:9.48:103,9,0	1/1:16,0:16:22.54:206,23,0	1/1:15,0:15:29.73:261,30,0	1/1:15,0:15:14.98:133,15,0	1/1:27,2:28:38.99:336,39,0	1/1:22,0:21:24.49:227,24,0	1/1:12,0:12:15.01:137,15,0	1/1:9,0:9:9:80,9,0	1/1:4,0:4:12:105,12,0	1/1:15,0:15:21:184,21,0	1/1:9,0:9:14.97:134,15,0	1/1:13,1:14:17.02:134,17,0	1/1:7,0:6:3:26,3,0	1/1:8,0:8:9:78,9,0	1/1:5,0:5:9:78,9,0	1/1:16,0:16:24.02:234,24,0	1/1:14,0:14:33.01:340,33,0	1/1:13,0:13:21:187,21,0
chr10	14203700	.	G	GCA	2316.97	PASS	AB=0.602;AC=27;AF=0.482;AN=56;BaseQRankSum=4.965;DP=559;FS=3.778;HRun=0;HaplotypeScore=110.2623;InbreedingCoeff=0.6882;MQ=54.22;MQ0=1;MQRankSum=-5.147;QD=8.68;ReadPosRankSum=-1.640;VQSLOD=2.8934;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:75.89:0,76,1198	0/0:3,6:10:3.99:0,4,30	0/0:22,0:20:53.75:0,54,743	0/0:35,0:25:56.63:0,57,681	1/1:14,0:14:14.94:164,15,0	0/0:18,0:15:1.53:0,2,4	1/1:20,0:19:1.32:21,1,0	1/1:21,0:20:36.97:405,37,0	1/1:7,1:8:12.01:122,12,0	1/1:6,12:18:10.18:294,10,0	0/0:10,2:11:4.87:0,5,20	0/0:24,0:24:72.22:0,72,1041	0/0:21,0:21:51.07:0,51,701	0/0:27,0:27:69.20:0,69,963	1/1:18,4:21:4.59:91,5,0	0/1:3,12:16:0:0,0,0	1/1:22,6:28:16.97:273,17,0	1/1:4,12:16:6.92:79,7,0	0/1:6,8:14:3.09:308,0,3	1/1:6,0:6:6.01:74,6,0	1/1:10,23:33:3.01:36,3,0	0/0:15,0:15:45.12:0,45,602	0/0:17,0:17:37.59:0,38,462	0/0:35,0:35:63.88:0,64,1159	0/0:21,0:21:49.90:0,50,860	1/1:3,16:19:12.36:360,12,0	0/1:9,13:20:5.56:160,0,6	1/1:7,1:8:11.05:123,11,0
chr10	14205062	.	T	TAAAA	20133.60	PASS	AB=0.929;AC=53;AF=0.946;AN=56;BaseQRankSum=-4.214;DP=656;FS=16.330;HRun=9;HaplotypeScore=185.6591;InbreedingCoeff=0.7270;MQ=61.20;MQ0=3;MQRankSum=-0.557;QD=32.16;ReadPosRankSum=0.750;VQSLOD=1.3898;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:29:51.52:358,52,0	1/1:5,7:12:30.10:642,30,0	0/1:24,0:11:2.55:3,0,56	0/0:30,0:11:9.45:0,9,54	1/1:17,16:36:92.79:1635,93,0	1/1:7,0:22:63.16:719,63,0	1/1:6,0:16:31.60:432,32,0	1/1:27,5:31:52.47:919,52,0	1/1:7,9:16:36.12:787,36,0	1/1:25,15:40:90.26:1746,90,0	1/1:13,10:26:72.08:1230,72,0	1/1:12,0:18:38.19:221,38,0	1/1:16,0:20:46.36:272,46,0	1/1:21,0:28:70.61:443,71,0	1/1:13,8:21:45:881,45,0	1/1:18,9:28:65.41:1241,65,0	1/1:7,13:25:65.96:1334,66,0	1/1:11,13:25:60.20:1259,60,0	1/1:20,4:24:45.01:724,45,0	1/1:13,14:29:75.05:1417,75,0	1/1:4,1:5:9.03:201,9,0	1/1:10,0:13:34.99:212,35,0	1/1:20,0:24:33.07:393,33,0	1/1:17,0:21:48.19:266,48,0	1/1:17,0:30:48.46:370,48,0	1/1:13,12:26:57.13:1046,57,0	1/1:14,8:25:51.15:1003,51,0	1/1:3,3:7:21.04:378,21,0
chr10	14205080	.	CAA	C	14592.71	PASS	AB=1.000;AC=53;AF=0.946;AN=56;BaseQRankSum=-6.138;DP=738;FS=25.474;HRun=8;HaplotypeScore=173.6331;InbreedingCoeff=0.5006;MQ=57.36;MQ0=15;MQRankSum=1.130;QD=21.59;ReadPosRankSum=6.285;VQSLOD=1.6652;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:23,7:30:36.18:762,36,0	1/1:2,7:9:20.65:245,21,0	0/1:52,0:10:29.19:29,0,59	0/0:62,0:17:9.17:0,9,99	1/1:9,26:36:48.39:815,48,0	1/1:3,18:23:63.63:695,64,0	1/1:7,8:15:29.11:304,29,0	1/1:10,18:30:12.73:564,13,0	1/1:4,18:21:15.60:331,16,0	1/1:9,26:36:26.03:797,26,0	1/1:8,20:28:61.73:664,62,0	1/1:13,6:19:42.11:494,42,0	1/1:21,5:26:69.05:770,69,0	1/1:20,4:24:56.97:659,57,0	1/1:4,17:22:44.26:519,44,0	1/1:10,20:32:34.24:541,34,0	1/1:6,22:28:47.73:650,48,0	1/1:5,26:32:25.34:594,25,0	1/1:3,18:22:22.38:584,22,0	1/1:5,21:27:41.48:717,41,0	1/1:0,6:6:6.02:73,6,0	1/1:8,7:15:39.04:443,39,0	1/1:16,6:22:30.15:635,30,0	1/1:17,3:20:32.76:539,33,0	1/1:23,9:32:73.05:796,73,0	1/1:6,25:30:74.22:790,74,0	1/1:7,19:27:7.79:400,8,0	1/1:1,7:8:15.04:182,15,0
chr10	14205087	.	AAC	A	5145.95	PASS	AB=0.985;AC=40;AF=0.714;AN=56;BaseQRankSum=7.365;DP=719;FS=6.781;HRun=0;HaplotypeScore=186.5641;InbreedingCoeff=-0.2566;MQ=57.12;MQ0=18;MQRankSum=-1.519;QD=7.82;ReadPosRankSum=11.390;VQSLOD=2.3780;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:28:27.22:233,27,0	1/1:7,0:7:20.17:113,20,0	0/0:60,1:13:2.56:0,3,93	0/1:62,6:18:24.24:24,0,111	1/1:30,0:30:50.26:330,50,0	1/1:21,0:21:58.45:307,58,0	0/1:12,0:12:3.32:102,0,3	0/1:33,0:32:57.26:210,0,57	0/1:21,0:20:14.06:128,0,14	1/1:32,0:31:10.39:307,10,0	0/1:25,1:25:29.33:251,0,29	0/1:19,0:19:4.56:125,0,5	1/1:24,0:24:34.84:227,35,0	0/1:23,0:23:33.61:172,0,34	1/1:21,1:22:2.23:215,2,0	1/1:26,0:26:22.24:192,22,0	1/1:27,1:28:14.72:273,15,0	1/1:32,0:32:30.37:262,30,0	1/1:22,0:22:17.43:204,17,0	0/1:28,0:28:18.12:238,0,18	1/1:6,0:6:5.70:31,6,0	0/1:16,1:17:7:141,0,7	0/1:25,0:25:60.39:171,0,60	0/1:18,0:18:7.18:156,0,7	1/1:26,1:27:24.34:276,24,0	0/1:32,0:31:39.56:236,0,40	0/1:22,1:23:25.28:163,0,25	0/1:8,0:8:5.88:58,0,6
chr10	14210296	.	GAAGA	G	1784.13	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.721;DP=732;FS=2.152;HRun=0;HaplotypeScore=114.1294;InbreedingCoeff=0.9989;MQ=89.38;MQ0=1;MQRankSum=-3.438;QD=40.55;ReadPosRankSum=0.349;VQSLOD=4.0887;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:93.30:0,93,2362	0/0:9,0:9:24.08:0,24,629	0/0:36,0:36:78.20:0,78,1843	0/0:32,0:32:68.75:0,69,1830	0/0:33,0:33:96.33:0,96,2492	1/1:1,20:20:48.16:873,48,0	1/1:4,19:23:57.20:1033,57,0	0/0:35,0:35:84.29:0,84,2160	0/0:31,0:31:87.23:0,87,2164	0/0:19,0:19:57.20:0,57,1417	0/0:31,0:31:81.28:0,81,2055	0/0:33,0:33:93.32:0,93,2334	0/0:27,0:27:81.26:0,81,2067	0/0:25,0:25:69.24:0,69,1807	0/0:32,0:32:87.30:0,87,2259	0/0:25,0:25:72.25:0,72,1877	0/0:24,0:24:66.23:0,66,1718	0/0:15,0:15:45.15:0,45,1168	0/0:24,0:24:60.21:0,60,1573	0/0:16,0:16:48.16:0,48,1257	0/0:28,0:28:72.23:0,72,1810	0/0:20,0:20:54.19:0,54,1382	0/0:29,0:29:84.29:0,84,2200	0/0:25,0:25:72.25:0,72,1839	0/0:19,0:19:54.19:0,54,1415	0/0:31,0:31:84.29:0,84,2176	0/0:38,0:38:99:0,111,2841	0/0:15,0:15:42.14:0,42,1099
chr10	14212570	.	CA	C	8772.12	PASS	AB=0.933;AC=37;AF=0.661;AN=56;BaseQRankSum=11.297;DP=689;FS=8.261;HRun=11;HaplotypeScore=68.2823;InbreedingCoeff=0.9191;MQ=77.00;MQ0=0;MQRankSum=-1.727;QD=18.43;ReadPosRankSum=1.176;VQSLOD=5.8200;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,2:39:46.93:0,47,896	1/1:1,12:13:32.96:271,33,0	0/1:13,1:14:14.40:14,0,31	0/0:18,0:18:25.55:0,26,235	1/1:1,33:34:92.86:764,93,0	1/1:4,29:33:77.91:640,78,0	1/1:2,16:18:44.95:370,45,0	1/1:11,21:33:61.92:498,62,0	1/1:10,24:34:36.91:510,37,0	1/1:4,32:38:99:791,100,0	1/1:4,25:30:44.96:565,45,0	0/0:24,2:27:22.66:0,23,617	0/0:22,2:25:22.73:0,23,637	0/0:19,1:20:32.50:0,32,518	1/1:6,22:30:54.99:431,55,0	1/1:4,22:26:59.93:493,60,0	1/1:0,18:18:53.94:443,54,0	1/1:3,13:16:32.96:271,33,0	1/1:1,21:23:64.94:521,65,0	1/1:3,23:26:33.93:485,34,0	1/1:1,12:13:29.96:246,30,0	0/0:18,1:19:23.45:0,23,439	0/0:32,0:32:87.21:0,87,921	0/0:18,0:18:51.11:0,51,536	0/0:15,0:15:45.11:0,45,480	1/1:3,24:27:71.91:591,72,0	1/1:10,33:44:91.92:745,92,0	1/1:1,5:6:14.98:123,15,0
chr10	14216500	.	C	CCAGGGAGAGTG	5978.22	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-3.712;DP=778;FS=4.556;HRun=0;HaplotypeScore=242.3675;InbreedingCoeff=0.9992;MQ=80.08;MQ0=0;MQRankSum=-10.939;QD=98.00;ReadPosRankSum=-2.094;VQSLOD=4.2940;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,156,5275	0/0:13,0:13:39.13:0,39,1324	0/0:24,0:24:63.18:0,63,1786	0/0:16,0:16:33.04:0,33,824	0/0:34,0:34:90.25:0,90,2850	1/1:13,19:34:78.09:3418,78,0	1/1:12,13:27:51.02:2560,51,0	0/0:26,0:26:72.22:0,72,2356	0/0:26,0:26:75.21:0,75,2302	0/0:26,0:26:63.22:0,63,2211	0/0:19,0:19:57.18:0,57,1930	0/0:33,0:33:93.29:0,93,3119	0/0:36,0:36:99:0,105,3397	0/0:31,0:31:90.31:0,90,3118	0/0:32,0:32:84.26:0,84,2779	0/0:38,0:38:99:0,105,3596	0/0:34,0:34:93.32:0,93,3126	0/0:12,0:12:36.12:0,36,1092	0/0:21,0:21:63.19:0,63,1968	0/0:24,0:24:69.20:0,69,2213	0/0:56,0:56:99:0,169,5588	0/0:23,0:23:69.22:0,69,2338	0/0:26,0:26:72.25:0,72,2491	0/0:20,0:20:60.21:0,60,1932	0/0:25,0:25:66.23:0,66,2292	0/0:27,0:27:78.25:0,78,2671	0/0:34,0:34:96.29:0,96,3250	0/0:9,0:9:27.09:0,27,951
chr10	14219678	.	AAAAAAAAAAAGAAC	A	965.38	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=4.818;DP=582;FS=0.000;HRun=0;HaplotypeScore=201.0115;InbreedingCoeff=0.8130;MQ=47.05;MQ0=24;MQRankSum=-4.181;QD=26.09;ReadPosRankSum=3.782;VQSLOD=2.4091;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:42:85.13:0,85,4524	0/0:8,0:8:18.04:0,18,876	0/0:26,0:2:5.81:0,6,97	0/0:20,0:5:2.20:0,2,110	0/0:37,0:36:77.11:0,77,3957	1/1:12,11:23:22.55:825,23,0	1/1:12,2:14:8.56:253,9,0	0/0:25,0:25:46.38:0,46,1876	0/0:20,0:20:51.18:0,51,2716	0/0:24,0:23:52.42:0,52,2499	0/0:19,0:18:44.19:0,44,2325	0/0:18,0:18:51.18:0,51,2583	0/0:19,0:18:45.09:0,45,1993	0/0:10,0:10:27.09:0,27,1210	0/0:17,0:17:48.16:0,48,2322	0/0:15,0:15:36.07:0,36,1719	0/0:35,0:35:85.09:0,85,3862	0/0:23,0:22:48.64:0,49,2373	0/0:19,0:19:33.11:0,33,1648	0/0:26,0:23:58.37:0,58,2765	0/0:18,0:16:39.54:0,40,1820	0/0:10,0:9:21.04:0,21,797	0/0:18,0:16:37.20:0,37,1668	0/0:16,0:15:21.03:0,21,924	0/0:11,0:11:28.34:0,28,1464	0/0:25,0:25:70.42:0,70,2939	0/0:33,0:33:87.30:0,87,4186	0/0:10,0:6:15.05:0,15,829
chr10	14223464	.	AAGATT	A	18896.45	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=18.013;DP=707;FS=9.060;HRun=0;HaplotypeScore=143.1738;InbreedingCoeff=0.9987;MQ=70.97;MQ0=0;MQRankSum=-9.885;QD=48.33;ReadPosRankSum=1.020;VQSLOD=4.8551;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:96.33:0,96,2835	1/1:4,6:10:18.06:365,18,0	0/0:13,0:13:30.08:0,30,718	0/0:14,0:14:42.14:0,42,1137	1/1:2,26:28:63.14:1189,63,0	0/0:28,0:28:78.27:0,78,2280	0/0:25,0:25:72.23:0,72,2030	1/1:5,18:23:54.19:1073,54,0	1/1:1,29:30:72.25:1450,72,0	1/1:4,28:33:84.29:1653,84,0	1/1:4,18:22:54.18:1058,54,0	0/0:24,0:24:72.23:0,72,2093	0/0:41,0:41:99:0,111,3224	0/0:22,0:22:66.23:0,66,1865	1/1:1,42:43:99:2062,102,0	1/1:5,32:37:75.26:1523,75,0	1/1:2,16:18:48.16:968,48,0	1/1:1,16:17:39.13:792,39,0	1/1:2,12:14:33.10:618,33,0	1/1:0,26:26:78.23:1539,78,0	1/1:3,18:21:45.15:909,45,0	0/0:31,0:31:81.26:0,81,2302	0/0:37,0:37:99:0,102,2961	0/0:19,0:19:54.19:0,54,1598	0/0:27,0:27:78.27:0,78,2322	1/1:3,26:29:78.27:1514,78,0	1/1:3,25:28:75.26:1514,75,0	1/1:1,11:12:33.11:670,33,0
chr10	14223998	.	GA	G	8502.88	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=10.414;DP=789;FS=0.935;HRun=11;HaplotypeScore=80.7320;InbreedingCoeff=0.9725;MQ=72.08;MQ0=0;MQRankSum=-4.798;QD=18.29;ReadPosRankSum=2.400;VQSLOD=5.8444;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:53,1:54:99:0,108,1318	1/1:1,9:10:23.97:197,24,0	0/0:20,0:21:19.33:0,19,229	0/0:14,0:14:22.92:0,23,260	1/1:4,13:17:35.92:296,36,0	1/1:3,16:19:47.94:394,48,0	1/1:3,19:22:47.93:394,48,0	1/1:6,20:26:30.94:461,31,0	1/1:3,25:28:59.91:493,60,0	1/1:10,20:30:56.85:460,57,0	1/1:1,12:14:34.99:277,35,0	0/0:40,0:42:99:0,120,1223	0/0:35,1:40:93.06:0,93,956	0/0:36,0:36:96.19:0,96,994	1/1:9,35:46:93.76:739,94,0	1/1:4,32:36:89.88:739,90,0	1/1:3,28:31:77.91:640,78,0	1/1:1,15:16:12.97:313,13,0	1/1:9,15:25:49.91:395,50,0	1/1:5,19:25:53.91:443,54,0	1/1:5,26:31:65.90:542,66,0	0/0:26,1:27:38.51:0,39,615	0/0:33,1:34:65.53:0,66,869	0/0:23,0:24:57.44:0,57,583	0/0:27,3:31:4.07:0,4,631	1/1:4,20:24:56.90:464,57,0	1/1:6,40:46:99:887,108,0	1/1:3,16:19:44.93:369,45,0
chr10	14224166	.	GACAC	G	2941.06	PASS	AB=0.995;AC=26;AF=0.464;AN=56;BaseQRankSum=8.699;DP=1011;FS=12.538;HRun=0;HaplotypeScore=311.0738;InbreedingCoeff=0.2747;MQ=46.36;MQ0=25;MQRankSum=-5.261;QD=4.54;ReadPosRankSum=-2.005;VQSLOD=0.7860;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:61,0:61:99:0,165,3638	1/1:14,0:14:16.16:92,16,0	0/0:35,0:16:34.02:0,34,442	0/0:46,0:23:52.66:0,53,861	1/1:32,0:29:15.28:134,15,0	1/1:12,7:19:26.88:265,27,0	1/1:17,12:29:18.81:169,19,0	0/1:81,0:80:30.11:449,0,30	0/1:37,0:36:52.71:53,0,155	0/1:40,0:39:99:419,0,201	1/1:28,0:24:17.86:149,18,0	0/0:46,0:45:99:0,132,2849	0/0:30,0:30:87.17:0,87,1768	0/0:28,0:28:81.14:0,81,1578	1/1:51,0:50:17.67:178,18,0	0/1:58,0:58:49.18:220,0,49	0/1:29,0:28:14.14:103,0,14	0/1:19,0:20:12.14:110,0,12	0/1:36,0:27:29.39:167,0,29	1/1:35,0:34:13.82:184,14,0	1/1:44,0:39:12.45:100,12,0	0/0:28,0:28:78.18:0,78,1658	0/0:18,0:18:51.09:0,51,1055	0/0:49,0:49:99:0,139,2909	0/0:22,0:22:57.17:0,57,1365	0/1:40,0:38:99:208,0,155	0/1:43,0:43:89.05:89,0,398	0/1:10,0:10:52.34:52,0,117
chr10	14224186	.	G	GAC	1560.63	PASS	AB=0.982;AC=16;AF=0.286;AN=56;BaseQRankSum=12.740;DP=1016;FS=0.424;HRun=0;HaplotypeScore=305.6397;InbreedingCoeff=0.0797;MQ=40.90;MQ0=40;MQRankSum=-10.021;QD=3.13;ReadPosRankSum=-2.706;VQSLOD=1.4694;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:59,0:59:99:0,156,2028	0/0:14,0:13:2.33:0,2,24	0/0:30,0:11:23.99:0,24,286	0/0:44,0:12:9.92:0,10,156	0/0:32,0:28:2.24:0,2,7	0/0:19,0:19:4.30:0,4,119	0/0:29,0:29:7.09:0,7,57	0/1:84,0:81:83.72:84,0,404	0/1:36,0:35:18.55:19,0,32	0/1:37,0:33:99:206,0,169	0/1:26,0:22:0.01:1,0,0	0/0:54,0:53:99:0,147,1914	0/0:35,0:35:96.22:0,96,1189	0/0:38,0:38:96.26:0,96,1230	1/1:48,1:49:1.42:4,1,0	0/1:49,1:51:19.37:224,0,19	1/1:27,0:26:3.84:114,4,0	0/1:20,0:19:51.79:52,0,153	0/1:34,1:23:7.02:148,0,7	0/1:34,1:32:3.59:4,0,11	0/0:39,1:33:0:0,0,0	0/0:27,0:25:72.21:0,72,926	0/0:20,0:20:48.13:0,48,609	0/0:57,0:57:99:0,153,2020	0/0:20,0:20:41.93:0,42,514	0/1:40,1:40:99:304,0,134	0/1:41,4:44:79.07:344,0,79	1/1:10,0:10:18.35:208,18,0
chr10	14224188	.	C	CAG	4310.77	PASS	AB=0.936;AC=25;AF=0.446;AN=56;BaseQRankSum=14.577;DP=1042;FS=9.823;HRun=0;HaplotypeScore=308.7964;InbreedingCoeff=0.2072;MQ=40.63;MQ0=39;MQRankSum=-10.919;QD=6.56;ReadPosRankSum=-3.351;VQSLOD=2.5570;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:57:99:0,159,2401	1/1:14,2:15:2.52:77,3,0	0/0:29,0:10:29.95:0,30,397	0/0:43,0:10:13.97:0,14,202	1/1:33,3:32:3.31:50,3,0	0/1:19,0:19:26.93:27,0,47	0/1:27,0:27:9.25:29,0,9	0/1:87,0:84:99:464,0,564	0/1:27,8:34:6.41:6,0,143	0/1:36,4:36:99:648,0,146	1/1:27,2:25:5.99:50,6,0	0/0:56,0:55:99:0,159,2327	0/0:34,0:34:99:0,102,1499	0/0:40,0:40:99:0,117,1626	1/1:40,11:50:8.67:75,9,0	1/1:43,11:55:10.77:498,11,0	1/1:21,4:24:29.47:275,29,0	0/1:18,1:18:99:196,0,106	0/1:34,2:25:44.40:262,0,44	0/1:34,3:34:4.33:60,0,4	0/1:38,2:33:0:0,0,0	0/0:28,0:26:75.24:0,75,1118	0/0:20,0:20:54.14:0,54,778	0/0:58,0:58:99:0,156,2358	0/0:20,0:20:47.95:0,48,679	0/1:45,2:45:99:601,0,119	0/1:39,9:47:32.17:614,0,32	1/1:5,5:10:29.81:378,30,0
chr10	14224208	.	G	GAC	9804.05	PASS	AB=0.827;AC=36;AF=0.643;AN=56;BaseQRankSum=14.884;DP=1042;FS=17.599;HRun=0;HaplotypeScore=276.4792;InbreedingCoeff=0.8025;MQ=42.18;MQ0=46;MQRankSum=-13.846;QD=14.15;ReadPosRankSum=-3.608;VQSLOD=2.8348;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:58:99:0,141,1898	1/1:10,7:16:20.88:267,21,0	0/0:27,0:7:11.23:0,11,99	0/1:57,0:11:1.68:2,0,7	1/1:17,12:26:0.15:98,0,0	1/1:3,18:21:15.05:260,15,0	1/1:19,13:32:9.24:117,9,0	1/1:38,29:65:99:1793,113,0	0/1:15,17:31:4.44:166,0,4	1/1:20,20:36:40.12:1278,40,0	1/1:15,11:23:6.02:105,6,0	0/0:54,0:54:99:0,135,1822	0/0:34,0:34:99:0,102,1358	0/0:36,0:36:99:0,108,1454	1/1:24,27:50:17.74:246,18,0	1/1:28,26:54:32.04:618,32,0	1/1:14,11:25:21.05:364,21,0	1/1:14,5:18:13.10:410,13,0	1/1:30,9:33:69.02:925,69,0	1/1:14,20:31:16.54:199,17,0	1/1:34,9:39:3.01:47,3,0	0/0:32,0:30:78.19:0,78,1012	0/0:21,0:21:45.12:0,45,583	0/0:65,0:65:99:0,168,2239	0/0:20,0:20:48.16:0,48,654	1/1:26,28:51:73.30:1667,73,0	1/1:22,23:44:42.85:857,43,0	1/1:1,7:8:24.08:388,24,0
chr10	14224210	.	C	CAG	4820.59	PASS	AB=0.990;AC=26;AF=0.464;AN=56;BaseQRankSum=14.569;DP=1037;FS=11.948;HRun=0;HaplotypeScore=287.7452;InbreedingCoeff=0.1619;MQ=42.17;MQ0=48;MQRankSum=-11.372;QD=7.64;ReadPosRankSum=1.472;VQSLOD=3.1737;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:57:99:0,147,2197	0/1:17,0:16:27.53:113,0,28	0/0:33,0:6:14.83:0,15,176	0/0:56,0:12:3.21:0,3,87	1/1:29,0:26:0.11:48,0,0	1/1:20,0:21:15.03:163,15,0	0/1:27,0:30:13.82:42,0,14	0/1:64,0:62:79.85:895,0,80	0/1:32,0:32:46.07:74,0,46	0/1:37,0:33:41.27:616,0,41	1/1:26,0:23:6:56,6,0	0/0:50,0:50:99:0,150,2162	0/0:34,0:34:99:0,102,1551	0/0:36,0:36:99:0,108,1648	1/1:50,1:50:16.14:118,16,0	0/1:55,0:55:36.16:283,0,36	1/1:21,4:25:11.26:232,11,0	0/1:17,2:18:57.85:248,0,58	0/1:37,0:33:70.21:369,0,70	1/1:33,0:30:9.25:93,9,0	1/1:34,9:41:2.36:22,2,0	0/0:33,0:31:81.26:0,81,1210	0/0:23,0:23:51.14:0,51,732	0/0:64,0:64:99:0,174,2601	0/0:19,0:19:51.16:0,51,759	0/1:54,0:52:77.51:836,0,78	0/1:45,0:44:52.81:376,0,53	1/1:8,0:8:24.02:235,24,0
chr10	14224214	.	G	GAC	2983.60	PASS	AB=0.942;AC=21;AF=0.375;AN=56;BaseQRankSum=17.370;DP=1013;FS=11.057;HRun=0;HaplotypeScore=278.2961;InbreedingCoeff=0.0769;MQ=42.99;MQ0=43;MQRankSum=-13.924;QD=5.29;ReadPosRankSum=0.174;VQSLOD=1.6359;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:57:99:0,138,1803	0/1:17,0:16:18.01:91,0,18	0/0:34,0:7:4.25:0,4,33	0/1:60,0:11:9.60:10,0,66	0/0:29,1:27:3.58:0,4,71	1/1:19,0:19:12.85:69,13,0	0/0:27,0:27:7.35:0,7,84	0/1:48,0:47:66.38:289,0,66	0/1:31,2:32:28.39:57,0,28	0/1:35,2:34:16.86:414,0,17	0/1:25,1:24:3.47:3,0,22	0/0:48,0:48:99:0,135,1839	0/0:35,0:35:90.30:0,90,1226	0/0:36,0:36:96.79:0,97,1295	0/1:43,7:49:9.01:9,0,64	0/1:48,9:57:45.04:292,0,45	1/1:26,2:28:1.22:220,1,0	1/1:17,2:18:25.40:183,25,0	0/1:31,1:28:99:228,0,131	0/1:31,1:29:22.81:28,0,23	0/0:43,1:41:3.89:0,4,36	0/0:35,0:34:76.10:0,76,973	0/0:20,0:20:48.15:0,48,633	0/0:62,0:62:99:0,164,2190	0/0:19,0:19:42.07:0,42,550	1/1:51,1:49:42.63:568,43,0	0/1:37,7:43:6.94:468,0,7	1/1:8,1:9:3.17:226,3,0
chr10	14224216	.	C	CAG	587.96	PASS	AB=0.994;AC=13;AF=0.232;AN=56;BaseQRankSum=12.180;DP=1017;FS=0.465;HRun=0;HaplotypeScore=284.2399;InbreedingCoeff=0.0143;MQ=43.26;MQ0=41;MQRankSum=-10.012;QD=1.67;ReadPosRankSum=0.602;VQSLOD=2.1260;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:59,0:59:99:0,147,2165	0/1:18,0:17:14.47:14,0,55	0/0:38,0:7:8.80:0,9,81	0/0:60,0:12:12.25:0,12,110	0/0:30,0:27:17.02:0,17,91	0/0:21,0:21:11.73:0,12,87	0/0:28,0:28:8.04:0,8,135	0/0:46,0:45:77.63:0,78,340	0/1:33,0:32:3.44:3,0,26	0/1:37,0:34:89.79:90,0,119	0/1:27,0:24:6.89:7,0,14	0/0:49,0:49:99:0,141,2092	0/0:37,0:37:96.30:0,96,1424	0/0:37,0:37:99:0,108,1562	0/0:49,1:49:14.18:0,14,55	0/1:55,0:55:93.40:112,0,93	1/1:25,3:28:8.53:111,9,0	0/1:18,1:18:46.21:46,0,71	0/1:32,0:29:9.46:9,0,223	0/0:31,0:28:6.71:0,7,23	0/0:45,0:42:5.73:0,6,38	0/0:32,0:31:84.07:0,84,1202	0/0:20,0:20:48.16:0,48,728	0/0:62,0:62:99:0,173,2545	0/0:19,0:19:51.12:0,51,711	0/1:52,0:49:97.69:98,0,193	0/1:43,0:43:99:158,0,112	1/1:9,0:9:1.75:87,2,0
chr10	14224220	.	GAC	G	4577.51	PASS	AB=0.927;AC=30;AF=0.536;AN=56;BaseQRankSum=9.534;DP=1023;FS=2.907;HRun=0;HaplotypeScore=258.5004;InbreedingCoeff=0.5425;MQ=43.89;MQ0=43;MQRankSum=-4.235;QD=7.68;ReadPosRankSum=-4.249;VQSLOD=3.7617;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:62,0:62:99:0,123,1765	1/1:13,5:18:19.76:237,20,0	0/0:41,0:8:17.25:0,17,194	0/0:69,0:13:21.24:0,21,189	1/1:21,6:24:7.04:224,7,0	0/1:22,0:22:9.60:10,0,39	0/1:28,0:28:7.85:41,0,8	1/1:42,4:45:56.62:471,57,0	0/1:25,6:30:1.49:124,0,1	1/1:26,8:33:0.65:540,1,0	1/1:25,2:25:20.88:211,21,0	0/0:48,0:49:84.77:0,85,1513	0/0:33,2:35:25.16:0,25,1221	0/0:32,2:35:22.97:0,23,1250	1/1:33,14:46:26.44:278,26,0	1/1:39,14:53:36.70:414,37,0	1/1:15,12:29:14.61:111,15,0	0/1:17,0:16:26.91:87,0,27	1/1:27,4:29:20.23:381,20,0	1/1:21,9:27:14.34:141,14,0	0/1:44,5:46:24.66:118,0,25	0/0:32,1:31:8.92:0,9,797	0/0:21,0:21:8.43:0,8,541	0/0:66,0:66:99:0,122,1873	0/0:16,0:16:33.96:0,34,484	1/1:41,9:47:22.56:649,23,0	0/1:34,8:44:62.08:408,0,62	1/1:4,6:10:15.53:131,16,0
chr10	14224237	.	ACT	A	1031.84	PASS	AB=0.996;AC=21;AF=0.375;AN=56;BaseQRankSum=12.876;DP=958;FS=2.163;HRun=0;HaplotypeScore=226.9907;InbreedingCoeff=-0.1973;MQ=49.29;MQ0=42;MQRankSum=-1.329;QD=1.95;ReadPosRankSum=4.357;VQSLOD=2.6369;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:56:99:0,107,1837	0/1:14,0:14:5.55:51,0,6	0/0:54,0:17:24.96:0,25,338	0/0:71,0:17:13.72:0,14,138	0/1:26,0:25:44.57:63,0,45	1/1:15,7:24:20.95:185,21,0	1/1:8,19:27:14.79:182,15,0	0/1:37,0:37:63.78:64,0,268	0/1:27,0:27:34.54:35,0,109	0/1:36,0:35:81.43:81,0,109	0/1:23,0:21:43.60:44,0,58	0/0:48,3:51:39.01:0,39,1324	0/0:37,0:37:72.36:0,72,1247	0/0:41,0:41:83.97:0,84,1354	0/1:42,0:42:46.77:47,0,150	0/1:50,0:50:61.17:61,0,113	0/0:29,0:29:2.34:0,2,77	0/1:12,0:11:16.59:35,0,17	0/1:30,1:30:89.83:110,0,90	0/1:22,0:21:29.84:34,0,30	0/1:37,0:32:18.01:18,0,58	0/1:28,1:28:18.14:18,0,735	0/0:21,0:21:39.12:0,39,608	0/0:53,1:54:73.95:0,74,1773	0/0:15,0:15:9.33:0,9,413	0/1:41,0:40:50.43:109,0,50	0/1:41,0:41:56.62:57,0,99	1/1:10,0:10:0.16:7,0,0
chr10	14225022	.	T	TC	1460.41	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-8.074;DP=709;FS=9.326;HRun=0;HaplotypeScore=63.3126;InbreedingCoeff=0.9974;MQ=91.02;MQ0=0;MQRankSum=-1.662;QD=32.45;ReadPosRankSum=-0.061;VQSLOD=2.4378;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,117,1636	0/0:12,0:12:36.04:0,36,443	0/0:22,0:22:58.04:0,58,828	0/0:33,0:34:77.36:0,77,1044	0/0:27,0:27:78.22:0,78,1026	1/1:0,28:28:69.24:1102,69,0	1/1:0,17:17:30.10:479,30,0	0/0:35,0:35:99:0,102,1398	0/0:22,0:22:66.22:0,66,923	0/0:28,0:28:81.25:0,81,1101	0/0:20,0:20:60.20:0,60,839	0/0:25,0:25:72.23:0,72,990	0/0:22,0:22:66.22:0,66,922	0/0:20,0:20:57.18:0,57,782	0/0:20,0:20:60.19:0,60,823	0/0:40,0:40:99:0,117,1636	0/0:27,0:27:81.26:0,81,1114	0/0:13,0:13:36.11:0,36,488	0/0:30,0:30:87.28:0,87,1201	0/0:24,0:24:72.23:0,72,991	0/0:36,0:36:99:0,108,1510	0/0:11,0:11:33.10:0,33,446	0/0:22,0:22:63.19:0,63,848	0/0:22,0:22:63.15:0,63,827	0/0:32,0:32:93.31:0,93,1300	0/0:37,0:37:99:0,105,1448	0/0:35,0:35:99:0,105,1467	0/0:8,0:8:21.07:0,21,294
chr10	14229466	.	C	CT	2462.95	PASS	AB=0.832;AC=34;AF=0.607;AN=56;BaseQRankSum=-3.182;DP=599;FS=0.424;HRun=14;HaplotypeScore=76.4212;InbreedingCoeff=0.2579;MQ=74.61;MQ0=1;MQRankSum=2.242;QD=5.46;ReadPosRankSum=-1.520;VQSLOD=2.1222;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,1:39:25.27:0,25,328	0/1:8,1:9:13.27:20,0,13	1/1:26,1:20:1.50:27,2,0	0/1:15,0:9:1.36:1,0,4	0/1:16,6:22:11.97:148,0,12	0/1:21,4:26:26.41:26,0,211	0/0:14,0:16:16.54:0,17,198	1/1:14,11:28:35.51:263,36,0	1/1:3,14:18:26.84:225,27,0	1/1:14,3:18:17.92:142,18,0	0/1:9,5:15:27.43:27,0,51	0/1:15,1:20:4.71:5,0,83	0/1:15,2:17:9.31:9,0,66	0/0:23,1:26:28.72:0,29,298	1/1:6,15:21:5.10:166,5,0	1/1:3,17:20:20.36:228,20,0	0/1:13,17:32:6.34:178,0,6	0/1:13,9:21:86.85:95,0,87	1/1:13,9:23:22.12:214,22,0	1/1:7,8:15:20.76:157,21,0	1/1:5,8:13:6.84:98,7,0	0/0:14,2:16:6.10:0,6,164	0/1:13,3:19:4.93:5,0,84	0/0:28,0:28:57.56:0,58,453	0/0:22,0:23:46.73:0,47,293	1/1:8,16:27:19.70:258,20,0	1/1:9,12:22:6.69:156,7,0	1/1:4,14:21:3.88:194,4,0
chr10	14234027	.	AT	A	4898.94	PASS	AB=0.754;AC=35;AF=0.625;AN=56;BaseQRankSum=8.242;DP=561;FS=2.364;HRun=12;HaplotypeScore=66.1054;InbreedingCoeff=0.5779;MQ=70.82;MQ0=0;MQRankSum=-0.229;QD=11.92;ReadPosRankSum=2.718;VQSLOD=4.8770;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:39.46:0,39,372	1/1:2,8:10:17.02:138,17,0	0/0:13,0:14:8.18:0,8,96	0/1:7,0:7:15.05:15,0,19	1/1:3,19:22:34.10:375,34,0	1/1:2,0:15:20.13:58,20,0	1/1:1,0:11:12.20:35,12,0	0/1:11,15:27:11.09:281,0,11	1/1:4,13:18:31.87:238,32,0	0/1:9,10:19:18.49:216,0,18	1/1:3,8:11:10:169,10,0	0/0:16,0:16:42.07:0,42,417	0/0:31,0:31:81.05:0,81,759	0/0:20,0:20:60:0,60,570	1/1:7,18:25:47.69:371,48,0	1/1:9,24:33:6.82:409,7,0	1/1:6,19:26:41.73:310,42,0	1/1:8,20:28:56.69:440,57,0	0/1:5,7:13:4.47:142,0,4	1/1:10,17:28:48.99:376,49,0	1/1:18,12:31:40.69:307,41,0	0/0:16,0:16:39.06:0,39,389	0/0:20,1:20:2.80:0,3,355	0/1:22,4:26:17.83:18,0,542	0/0:13,1:14:12.32:0,12,291	1/1:5,21:26:65.69:507,66,0	1/1:12,12:25:19.37:283,19,0	1/1:0,9:9:26.90:209,27,0
chr10	14241039	.	ACAGCTATATGC	A	2087.54	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.250;DP=581;FS=7.093;HRun=0;HaplotypeScore=183.2940;InbreedingCoeff=0.9780;MQ=78.35;MQ0=0;MQRankSum=-7.852;QD=59.64;ReadPosRankSum=1.286;VQSLOD=2.9958;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,120,6089	0/0:4,0:4:12.04:0,12,670	0/0:15,0:16:36.12:0,36,1182	0/0:12,0:12:33.11:0,33,1235	0/0:8,0:8:24.08:0,24,1285	1/1:2,13:15:27.09:905,27,0	1/1:6,14:20:39.13:1303,39,0	0/0:40,0:40:99:0,105,5292	0/0:18,0:18:51.18:0,51,2821	0/0:20,0:20:39.13:0,39,2124	0/0:10,0:10:24.08:0,24,1326	0/0:23,0:23:60.21:0,60,3209	0/0:33,0:33:90.31:0,90,4538	0/0:29,0:29:78.27:0,78,4008	0/0:18,0:18:51.18:0,51,2708	0/0:22,0:22:60.21:0,60,3347	0/0:45,0:45:99:0,129,6869	0/0:24,0:24:72.25:0,72,3887	0/0:18,0:18:45.15:0,45,2325	0/0:9,0:9:24.08:0,24,1341	0/0:33,0:33:87.28:0,87,4320	0/0:11,0:11:30.09:0,30,1446	0/0:12,0:12:30.10:0,30,1513	0/0:30,0:30:81.28:0,81,4366	0/0:15,0:15:45.15:0,45,2285	0/0:23,0:23:60.21:0,60,3094	0/0:20,0:20:54.19:0,54,2922	0/0:7,0:7:21.07:0,21,1160
chr10	14241529	.	TGAGAAAGTCAA	T	891.55	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.211;DP=746;FS=3.730;HRun=0;HaplotypeScore=231.1620;InbreedingCoeff=0.9842;MQ=76.28;MQ0=0;MQRankSum=-2.904;QD=52.44;ReadPosRankSum=-2.847;VQSLOD=2.6155;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:60,0:60:99:0,169,8939	0/0:17,0:17:45.14:0,45,2288	0/0:25,0:26:69.21:0,69,3183	0/0:21,0:21:45.09:0,45,2178	1/1:2,15:17:42.10:986,42,0	0/0:20,0:20:45.15:0,45,2191	0/0:24,0:24:72.25:0,72,3809	0/0:30,0:30:72.25:0,72,3579	0/0:36,0:36:99:0,99,5519	0/0:29,0:29:72.24:0,72,3743	0/0:26,0:26:69.22:0,69,3533	0/0:25,0:25:66.23:0,66,3627	0/0:22,0:22:66.21:0,66,3058	0/0:27,0:27:75.26:0,75,4079	0/0:47,0:47:99:0,132,6873	0/0:24,0:24:69.24:0,69,3642	0/0:34,0:34:93.32:0,93,5011	0/0:24,0:24:69.24:0,69,3675	0/0:18,0:18:45.15:0,45,2405	0/0:27,0:27:81.28:0,81,4346	0/0:25,0:25:72.25:0,72,3735	0/0:21,0:21:54.19:0,54,2723	0/0:20,0:20:57.20:0,57,3111	0/0:33,0:33:93.30:0,93,5012	0/0:23,0:23:57.20:0,57,3016	0/0:35,0:35:93.32:0,93,5085	0/0:30,0:29:90.31:0,90,4896	0/0:5,0:5:14.99:0,15,405
chr10	14246225	.	T	TA	4383.28	PASS	AB=0.577;AC=31;AF=0.554;AN=56;BaseQRankSum=-7.148;DP=337;FS=3.796;HRun=11;HaplotypeScore=44.4134;InbreedingCoeff=0.8322;MQ=64.27;MQ0=0;MQRankSum=0.529;QD=20.01;ReadPosRankSum=-0.973;VQSLOD=5.4627;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:18:37.87:0,38,284	1/1:2,1:3:6:55,6,0	0/0:6,0:4:8.94:0,9,67	0/0:12,0:6:11.88:0,12,87	1/1:4,22:25:53.98:522,54,0	0/0:24,0:26:60.22:0,60,436	0/0:5,0:5:11.95:0,12,93	1/1:8,22:28:62.99:583,63,0	1/1:1,10:11:27.05:273,27,0	1/1:4,4:8:20.77:190,21,0	1/1:4,14:18:15.80:331,16,0	0/0:4,0:5:11:0,11,76	0/0:9,0:9:20.90:0,21,158	0/0:14,0:14:35.86:0,36,279	1/1:3,7:9:18.04:183,18,0	1/1:1,12:13:23.92:243,24,0	1/1:2,8:10:18.04:183,18,0	1/1:5,16:21:27.87:457,28,0	1/1:2,13:14:12.84:312,13,0	1/1:3,7:11:20.88:197,21,0	1/1:0,2:2:6.01:61,6,0	0/0:2,0:3:8.01:0,8,52	0/0:6,0:7:10.77:0,11,73	0/0:1,0:1:2.99:0,3,23	0/0:11,0:11:20.77:0,21,154	1/1:5,15:20:21.95:389,22,0	0/1:4,11:15:7.40:290,0,7	1/1:1,5:6:12.01:114,12,0
chr10	14246289	.	T	TAA	4758.55	PASS	AB=0.813;AC=35;AF=0.625;AN=56;BaseQRankSum=0.654;DP=426;FS=3.258;HRun=15;HaplotypeScore=79.8289;InbreedingCoeff=0.5010;MQ=74.42;MQ0=2;MQRankSum=-2.981;QD=13.71;ReadPosRankSum=-3.738;VQSLOD=3.1369;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:16,0:17:21.21:21,0,51	1/1:3,1:6:14.51:136,15,0	0/1:25,0:14:8.53:9,0,30	0/0:14,0:7:2.85:0,3,19	1/1:21,4:25:45.66:383,46,0	0/1:13,0:26:18.05:52,0,18	0/1:4,2:6:13.89:39,0,14	1/1:15,5:21:20.26:152,20,0	1/1:7,5:13:29.94:296,30,0	1/1:7,6:14:22.86:246,23,0	1/1:16,3:20:37.96:348,38,0	0/0:14,0:14:17.28:0,17,141	0/0:13,0:13:8.57:0,9,68	0/1:15,0:15:2.70:3,0,121	1/1:12,3:15:44.89:408,45,0	1/1:8,3:11:20.50:194,21,0	1/1:2,11:15:19.59:216,20,0	1/1:19,5:24:52.80:514,53,0	0/1:12,3:15:5.39:140,0,5	1/1:11,3:15:32.29:293,32,0	0/1:0,3:3:0:0,0,0	0/0:7,0:7:11.70:0,12,94	0/0:7,0:12:8.66:0,9,110	0/0:4,0:4:8.93:0,9,71	0/0:13,0:14:12.93:0,13,104	1/1:14,5:20:36.08:359,36,0	1/1:15,11:27:70.15:689,70,0	1/1:7,5:12:23.99:258,24,0
chr10	14246639	.	AGAGGAC	A	2280.41	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.916;DP=839;FS=16.273;HRun=0;HaplotypeScore=169.9585;InbreedingCoeff=0.9986;MQ=74.87;MQ0=0;MQRankSum=-9.961;QD=47.51;ReadPosRankSum=-0.226;VQSLOD=2.4550;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,123,4221	0/0:16,0:16:45.15:0,45,1576	0/0:16,0:16:30.10:0,30,850	0/0:15,0:15:36.06:0,36,815	0/0:31,0:31:84.27:0,84,2684	1/1:3,21:24:48.16:1074,48,0	1/1:1,23:24:57.20:1328,57,0	0/0:30,0:30:69.21:0,69,2200	0/0:26,0:26:72.25:0,72,2471	0/0:36,0:36:96.29:0,96,3047	0/0:20,0:20:54.19:0,54,1868	0/0:34,0:34:96.33:0,96,3312	0/0:44,0:44:99:0,126,4274	0/0:39,0:39:99:0,114,3931	0/0:39,0:39:99:0,99,3403	0/0:45,0:45:99:0,132,4583	0/0:39,0:39:99:0,114,3992	0/0:19,0:19:57.15:0,57,1909	0/0:23,0:23:63.22:0,63,2114	0/0:27,0:27:75.26:0,75,2507	0/0:49,0:49:99:0,141,4781	0/0:31,0:31:90.31:0,90,3118	0/0:35,0:35:99:0,102,3449	0/0:43,0:43:99:0,126,4367	0/0:17,0:17:48.16:0,48,1689	0/0:39,0:39:99:0,111,3593	0/0:27,0:27:81.26:0,81,2730	0/0:8,0:8:24.08:0,24,847
chr10	14246883	.	G	GCA	1455.71	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-7.986;DP=639;FS=4.559;HRun=0;HaplotypeScore=75.5069;InbreedingCoeff=0.9951;MQ=78.71;MQ0=0;MQRankSum=-3.342;QD=33.08;ReadPosRankSum=1.091;VQSLOD=5.9188;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:78.11:0,78,938	0/0:9,0:9:21.07:0,21,272	0/0:25,0:25:51.07:0,51,595	0/0:24,0:24:34.22:0,34,417	0/0:15,0:15:39.08:0,39,482	1/1:4,13:17:36.12:611,36,0	1/1:2,25:27:57.20:966,57,0	0/0:26,0:26:48.09:0,48,577	0/0:28,0:28:75.17:0,75,924	0/0:19,0:19:42.02:0,42,469	0/0:10,0:10:27.04:0,27,318	0/0:23,0:23:54.09:0,54,661	0/0:32,0:32:84.11:0,84,988	0/0:31,0:31:75.13:0,75,894	0/0:28,0:28:72.22:0,72,917	0/0:31,0:31:93.15:0,93,1133	0/0:44,0:44:99:0,117,1517	0/0:29,0:29:75.24:0,75,973	0/0:20,0:20:44.98:0,45,509	0/0:13,0:13:35.98:0,36,408	0/0:41,0:40:99:0,99,1246	0/0:10,0:10:30.02:0,30,352	0/0:9,0:9:24.04:0,24,291	0/0:32,0:32:87.21:0,87,1078	0/0:15,0:15:39.09:0,39,488	0/0:15,0:15:33.06:0,33,409	0/0:21,0:21:57.17:0,57,723	0/0:11,0:11:27.09:0,27,348
chr10	14248149	.	ATT	A	12468.06	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=14.260;DP=567;FS=1.105;HRun=5;HaplotypeScore=89.4138;InbreedingCoeff=0.9978;MQ=63.94;MQ0=2;MQRankSum=-6.704;QD=34.16;ReadPosRankSum=1.207;VQSLOD=4.3900;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:78.26:0,78,1395	1/1:1,8:8:21.07:293,21,0	0/0:15,0:12:36.12:0,36,631	0/0:18,0:17:48.12:0,48,801	1/1:3,22:24:42.14:588,42,0	1/1:2,9:11:18.06:252,18,0	1/1:0,27:27:63.21:881,63,0	1/1:5,22:27:63.19:864,63,0	1/1:1,20:21:60.20:840,60,0	1/1:2,15:17:48.16:668,48,0	1/1:1,15:15:36.12:503,36,0	0/0:13,0:13:36.12:0,36,656	0/0:15,0:15:45.15:0,45,784	0/0:26,0:26:66.21:0,66,1175	1/1:0,20:20:48.16:672,48,0	1/1:0,17:17:48.16:671,48,0	1/1:0,28:28:66.22:914,66,0	1/1:1,30:31:90.30:1254,90,0	1/1:3,15:18:45.15:630,45,0	1/1:1,18:19:42.14:587,42,0	1/1:1,13:14:33.11:461,33,0	0/0:20,0:20:54.19:0,54,989	0/0:23,0:23:69.22:0,69,1217	0/0:25,0:25:69.23:0,69,1221	0/0:18,0:18:51.17:0,51,935	1/1:1,24:25:69.23:963,69,0	1/1:1,31:32:77.79:1091,78,0	1/1:0,8:8:24.08:336,24,0
chr10	14248227	.	C	CA	2046.16	PASS	AB=0.852;AC=25;AF=0.446;AN=56;BaseQRankSum=-2.115;DP=585;FS=0.000;HRun=16;HaplotypeScore=101.5575;InbreedingCoeff=-0.1029;MQ=48.22;MQ0=10;MQRankSum=-4.453;QD=4.57;ReadPosRankSum=-2.399;VQSLOD=1.1444;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:27,1:32:17.43:17,0,141	0/1:7,3:10:15.59:71,0,16	0/0:9,0:3:1.22:0,1,3	0/0:6,0:2:2.89:0,3,16	0/1:21,6:25:14.77:136,0,15	0/0:4,0:20:34.81:0,35,97	0/0:5,0:20:25.70:0,26,71	0/1:23,15:35:28.77:162,0,29	0/1:8,3:11:10.30:95,0,10	1/1:24,5:29:21.19:175,21,0	0/1:13,1:15:16.23:82,0,16	0/0:18,0:18:11.22:0,11,71	0/1:15,0:16:2.98:3,0,63	0/0:22,0:23:28.95:0,29,127	0/1:14,7:22:6.17:188,0,6	0/1:16,8:24:9.36:212,0,9	0/1:23,9:32:53.06:219,0,53	1/1:14,6:21:26.41:215,26,0	0/1:17,3:21:16.48:97,0,16	1/1:19,5:23:9.94:154,10,0	1/1:9,0:9:5.66:47,6,0	0/0:17,0:19:27.84:0,28,155	0/1:19,1:21:22.40:22,0,62	0/0:19,1:17:22.24:0,22,106	0/1:20,2:25:12.68:13,0,157	0/1:23,2:25:26.31:59,0,26	1/1:23,7:29:6.61:223,7,0	0/1:8,0:11:27.24:27,0,30
chr10	14252579	.	GA	G	9232.51	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=10.323;DP=520;FS=21.588;HRun=6;HaplotypeScore=54.4145;InbreedingCoeff=0.9925;MQ=74.77;MQ0=0;MQRankSum=-1.173;QD=26.08;ReadPosRankSum=3.078;VQSLOD=3.1460;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:87.22:0,87,1083	1/1:0,5:5:12.03:129,12,0	0/0:16,0:15:27.71:0,28,410	0/0:11,0:11:24.07:0,24,299	1/1:0,22:22:57.14:612,57,0	1/1:0,13:13:33.08:355,33,0	1/1:2,17:19:48.12:514,48,0	1/1:3,15:18:45.11:483,45,0	1/1:1,13:14:16.17:335,16,0	1/1:1,14:15:42.11:451,42,0	1/1:3,20:23:54.13:580,54,0	0/0:22,0:22:66.21:0,66,868	0/0:13,0:13:36.12:0,36,472	0/0:15,0:15:36.10:0,36,459	1/1:2,20:22:51.13:548,51,0	1/1:4,14:18:36.09:387,36,0	1/1:5,31:36:84.21:903,84,0	1/1:3,13:16:36.09:387,36,0	1/1:3,19:22:54.12:573,54,0	1/1:1,23:24:60.10:632,60,0	1/1:2,14:16:33.08:355,33,0	0/0:8,0:8:24.08:0,24,316	0/0:10,0:10:27.09:0,27,355	0/0:20,0:20:54.17:0,54,697	0/0:21,0:21:57.14:0,57,717	1/1:2,26:28:78.02:796,78,0	1/1:0,27:27:81.20:871,81,0	1/1:1,15:16:30.08:322,30,0
chr10	14252727	.	AAG	A	2311.03	PASS	AB=0.999;AC=38;AF=0.679;AN=56;BaseQRankSum=-0.762;DP=541;FS=0.000;HRun=0;HaplotypeScore=98.7548;InbreedingCoeff=0.0454;MQ=49.68;MQ0=38;MQRankSum=-2.567;QD=4.53;ReadPosRankSum=-1.395;VQSLOD=2.5683;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:15,0:15:0.28:0,0,233	1/1:6,1:7:9.09:116,9,0	0/1:73,0:16:8.85:9,0,56	0/1:96,1:16:22.69:23,0,71	1/1:11,0:10:10.49:106,10,0	1/1:15,0:14:16.58:104,17,0	1/1:10,0:9:3.89:42,4,0	0/1:20,0:19:1.88:209,0,2	0/1:11,0:11:0.62:92,0,1	1/1:28,0:26:19.14:179,19,0	0/1:14,0:14:10.90:37,0,11	0/1:11,0:10:52.15:52,0,81	0/0:10,0:10:6.58:0,7,100	0/1:12,0:12:18.40:18,0,130	0/1:16,0:15:11.01:104,0,11	1/1:14,0:14:5.95:91,6,0	1/1:24,2:26:12.70:283,13,0	1/1:14,1:14:12.98:139,13,0	1/1:16,0:13:16.23:173,16,0	0/1:17,0:17:6.77:100,0,7	1/1:6,0:6:4.65:64,5,0	0/0:9,0:9:14.92:0,15,183	0/0:12,0:12:15.19:0,15,188	1/1:4,0:4:2.66:17,3,0	0/1:18,0:18:33.05:33,0,56	1/1:18,0:18:30.87:247,31,0	0/1:14,0:14:15.93:34,0,16	1/1:20,0:18:17.34:200,17,0
chr10	14252728	.	AG	A	4353.39	PASS	AB=0.999;AC=46;AF=0.821;AN=56;BaseQRankSum=1.607;DP=528;FS=0.000;HRun=1;HaplotypeScore=86.9445;InbreedingCoeff=0.0907;MQ=51.65;MQ0=37;MQRankSum=-1.294;QD=8.39;ReadPosRankSum=2.659;VQSLOD=2.2880;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:15,0:15:13.64:14,0,142	1/1:3,4:7:17.16:141,17,0	0/1:72,0:17:20.28:20,0,45	0/1:92,1:16:0.43:0,0,62	1/1:10,0:10:24.30:185,24,0	1/1:15,0:14:31.32:205,31,0	1/1:9,0:8:17.32:87,17,0	1/1:19,0:19:17.13:270,17,0	1/1:11,1:12:29.49:180,29,0	1/1:26,0:24:58.72:342,59,0	1/1:13,1:14:6.59:77,7,0	0/1:10,0:9:45.02:50,0,45	0/1:10,0:10:28.27:28,0,50	0/1:12,0:12:40.73:41,0,87	1/1:15,1:15:33.27:232,33,0	1/1:13,1:14:27.65:192,28,0	1/1:24,1:25:59.94:490,60,0	1/1:15,0:14:21.26:149,21,0	1/1:14,2:13:34.97:256,35,0	1/1:16,1:17:37.50:236,37,0	1/1:5,1:6:12.72:81,13,0	0/0:9,0:9:14.25:0,14,138	0/1:11,0:11:17.67:18,0,114	1/1:3,0:3:2.97:20,3,0	0/1:17,0:17:18.97:131,0,19	1/1:16,2:18:48.03:398,48,0	1/1:12,2:14:25.35:115,25,0	1/1:16,5:19:43.28:394,43,0
chr10	14252955	.	CG	C	2097.28	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.091;DP=709;FS=4.754;HRun=2;HaplotypeScore=69.9080;InbreedingCoeff=0.9960;MQ=87.23;MQ0=0;MQRankSum=-0.232;QD=33.83;ReadPosRankSum=-0.166;VQSLOD=3.5938;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:99:0,99,1481	0/0:8,0:8:21.07:0,21,310	0/0:27,0:27:75.73:0,76,1124	0/0:24,0:24:63.17:0,63,856	0/0:20,0:19:54.17:0,54,789	1/1:0,27:27:75.24:973,75,0	1/1:0,35:35:96.31:1246,96,0	0/0:35,0:35:99:0,99,1456	0/0:30,0:30:81.27:0,81,1213	0/0:10,0:10:27.08:0,27,385	0/0:23,0:23:63.19:0,63,907	0/0:30,0:30:90.29:0,90,1328	0/0:24,0:24:72.23:0,72,1059	0/0:24,0:24:72.24:0,72,1071	0/0:44,0:44:99:0,117,1707	0/0:26,0:26:69.22:0,69,1013	0/0:38,0:38:99:0,114,1706	0/0:13,0:13:36.12:0,36,539	0/0:28,0:28:84.26:0,84,1232	0/0:18,0:18:51.16:0,51,729	0/0:25,0:25:69.23:0,69,1034	0/0:9,0:9:24.08:0,24,359	0/0:13,0:13:39.11:0,39,544	0/0:36,0:36:99:0,102,1524	0/0:30,0:30:87.29:0,87,1303	0/0:30,0:30:84.27:0,84,1223	0/0:39,0:39:99:0,111,1641	0/0:10,0:10:30.08:0,30,428
chr10	14255591	.	AT	A	8484.15	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=13.922;DP=573;FS=5.301;HRun=8;HaplotypeScore=95.7791;InbreedingCoeff=0.9616;MQ=73.03;MQ0=0;MQRankSum=-9.880;QD=23.37;ReadPosRankSum=-1.992;VQSLOD=4.2518;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,114,1362	1/1:0,8:8:24.04:231,24,0	0/0:17,0:17:36.10:0,36,413	0/0:9,0:9:0.84:0,1,87	1/1:6,16:22:51.07:490,51,0	1/1:3,33:36:93.14:896,93,0	1/1:9,13:22:45.03:422,45,0	1/1:5,31:36:93.13:892,93,0	1/1:3,15:18:45.06:434,45,0	1/1:3,20:23:63.10:608,63,0	1/1:2,8:10:27.04:260,27,0	0/0:29,0:29:75.23:0,75,906	0/0:33,0:33:96.29:0,96,1160	0/0:18,0:18:51.14:0,51,603	1/1:6,25:31:78.09:740,78,0	1/1:3,21:24:60.08:579,60,0	1/1:3,9:12:30.04:289,30,0	1/1:3,8:11:21.03:202,21,0	1/1:5,11:16:42.07:405,42,0	1/1:3,18:21:45.05:429,45,0	1/1:3,12:15:27.03:261,27,0	0/0:14,0:14:39.12:0,39,471	0/0:9,0:9:24.06:0,24,280	0/0:23,0:23:60.17:0,60,713	0/0:18,0:18:51.16:0,51,615	1/1:5,20:25:63.09:607,63,0	1/1:6,20:26:60.05:566,60,0	1/1:4,3:7:18.03:174,18,0
chr10	14255629	.	A	AAAC	22053.63	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=0.247;DP=607;FS=9.547;HRun=0;HaplotypeScore=95.4576;InbreedingCoeff=0.9958;MQ=75.70;MQ0=0;MQRankSum=-12.079;QD=56.69;ReadPosRankSum=-2.296;VQSLOD=5.5903;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,108,1842	1/1:1,10:12:33.11:727,33,0	0/0:21,0:21:51.17:0,51,839	0/0:12,0:12:33.04:0,33,490	1/1:4,16:22:45.15:895,45,0	1/1:4,29:34:96.33:2031,96,0	1/1:2,14:16:42.14:944,42,0	1/1:12,21:33:90.27:1854,90,0	1/1:3,16:19:54.16:1095,54,0	1/1:2,30:35:99:2217,102,0	1/1:1,10:11:30.10:656,30,0	0/0:31,0:31:90.30:0,90,1510	0/0:28,0:28:81.28:0,81,1382	0/0:19,0:19:54.18:0,54,919	1/1:6,21:29:78.25:1541,78,0	1/1:2,31:34:90.29:1996,90,0	1/1:3,7:10:24.08:516,24,0	1/1:1,11:13:30.10:664,30,0	1/1:2,17:20:60.09:1152,60,0	1/1:6,20:27:69.23:1434,69,0	1/1:0,5:5:15.05:251,15,0	0/0:19,0:19:54.16:0,54,851	0/0:11,0:11:30.10:0,30,512	0/0:21,0:21:63.22:0,63,1075	0/0:19,0:19:51.17:0,51,866	1/1:2,25:28:81.26:1797,81,0	1/1:4,30:34:84.28:1868,84,0	1/1:0,7:7:18.06:414,18,0
chr10	14259428	.	CAA	C	4658.93	PASS	AB=0.904;AC=33;AF=0.589;AN=56;BaseQRankSum=1.735;DP=697;FS=10.699;HRun=3;HaplotypeScore=114.7171;InbreedingCoeff=0.5686;MQ=61.26;MQ0=11;MQRankSum=0.237;QD=11.01;ReadPosRankSum=-0.936;VQSLOD=0.6647;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:40:24.44:0,24,373	0/1:1,13:14:26.97:55,0,27	0/0:25,0:17:38.19:0,38,420	0/0:26,0:16:12.09:0,12,338	1/1:15,0:15:41.45:345,41,0	0/1:35,0:35:14.06:367,0,14	1/1:22,0:21:27.53:294,28,0	1/1:18,0:18:40.88:330,41,0	1/1:1,27:28:7.78:127,8,0	1/1:0,28:28:68.58:561,69,0	1/1:12,0:10:23.83:211,24,0	0/0:31,0:31:61.73:0,62,567	0/0:27,0:27:51.42:0,51,788	0/0:33,0:33:71.89:0,72,677	1/1:0,33:33:8.98:112,9,0	1/1:1,31:32:3.49:44,3,0	0/1:23,0:23:23.59:226,0,24	1/1:4,18:22:6.08:62,6,0	0/1:9,0:9:24.28:66,0,24	1/1:10,0:10:26.92:213,27,0	1/1:30,1:29:43.20:426,43,0	0/1:26,0:26:30.65:31,0,364	0/0:19,0:19:9.39:0,9,405	0/0:38,0:37:75.05:0,75,908	0/0:32,0:32:32.45:0,32,497	1/1:27,0:25:50.52:531,51,0	1/1:24,1:25:57.82:433,58,0	1/1:13,0:12:31.26:223,31,0
chr10	14262417	.	A	AAAAAGAAAAG	12202.83	PASS	AB=1.000;AC=37;AF=0.685;AN=54;BaseQRankSum=-4.585;DP=434;FS=7.496;HRun=0;HaplotypeScore=124.1818;InbreedingCoeff=0.7942;MQ=49.84;MQ0=7;MQRankSum=-6.835;QD=39.36;ReadPosRankSum=-4.140;VQSLOD=2.8914;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:57.10:0,57,1608	1/1:2,3:11:9.03:449,9,0	0/1:13,0:7:30.58:31,0,78	./.	1/1:6,10:22:33.04:1449,33,0	1/1:11,0:11:9.03:381,9,0	1/1:24,0:24:27.05:899,27,0	1/1:24,0:31:30.51:903,31,0	1/1:8,4:12:9.03:448,9,0	1/1:4,2:16:26.97:894,27,0	1/1:10,6:23:19.87:795,20,0	0/0:12,0:12:18.05:0,18,478	0/0:13,0:13:27.09:0,27,750	0/0:8,0:8:12.04:0,12,361	1/1:5,3:12:9.03:440,9,0	1/1:6,4:14:12.04:598,12,0	1/1:19,2:19:5.09:297,5,0	1/1:13,2:16:6.01:299,6,0	1/1:11,1:20:39.02:982,39,0	1/1:8,5:20:21.03:821,21,0	1/1:1,2:3:6.02:299,6,0	0/0:9,0:9:21.06:0,21,553	0/0:10,0:10:21.02:0,21,520	0/0:16,0:16:39.13:0,39,1148	0/0:14,0:14:30.09:0,30,777	1/1:6,8:21:39.04:1351,39,0	1/1:7,4:14:14.61:725,15,0	1/1:4,0:4:6:142,6,0
chr10	14262428	.	A	AAAAGAAAAGAAAAGAAAAGG	12209.25	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=10.600;DP=474;FS=0.418;HRun=0;HaplotypeScore=233.0949;InbreedingCoeff=-0.1733;MQ=58.07;MQ0=7;MQRankSum=-11.970;QD=34.30;ReadPosRankSum=5.943;VQSLOD=3.2207;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:69.15:0,69,2988	0/1:11,0:11:29.95:150,0,30	0/1:18,0:10:2.46:2,0,204	0/1:20,0:7:6.04:6,0,52	0/1:23,0:23:33.87:949,0,34	1/1:6,2:19:21.07:1856,21,0	1/1:23,0:23:56.99:2963,57,0	0/1:33,0:33:0.08:1079,0,0	0/1:15,0:14:43.91:367,0,44	0/1:16,0:16:27.52:477,0,28	0/1:21,0:21:50.87:466,0,51	0/0:13,0:13:36.06:0,36,1029	0/0:14,0:14:36.08:0,36,1409	0/0:8,0:8:15.04:0,15,657	0/1:16,0:16:99:186,0,128	1/1:12,0:12:18.06:383,18,0	0/1:23,0:21:18.16:509,0,18	0/1:15,0:15:34.37:309,0,34	0/1:23,0:22:87.19:667,0,87	0/1:22,0:22:43.71:396,0,44	0/1:4,0:4:11.89:194,0,12	0/0:11,0:11:27.07:0,27,1008	0/0:12,0:12:33.07:0,33,975	0/0:17,0:17:28.94:0,29,1943	0/0:16,0:16:45.04:0,45,1475	0/1:23,0:23:33.88:718,0,34	0/1:14,0:14:27.85:444,0,28	0/1:5,0:5:20.39:90,0,20
chr10	14262544	.	G	GTT	3688.44	PASS	AB=1.000;AC=34;AF=0.607;AN=56;BaseQRankSum=-5.682;DP=572;FS=4.672;HRun=14;HaplotypeScore=68.8039;InbreedingCoeff=0.7404;MQ=66.46;MQ0=14;MQRankSum=0.900;QD=9.97;ReadPosRankSum=-4.363;VQSLOD=1.1080;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:35:42.89:0,43,438	1/1:1,7:9:17.41:192,17,0	0/1:41,0:12:5.10:6,0,5	0/0:37,0:14:3.30:0,3,26	1/1:10,11:28:36.49:420,36,0	0/0:8,0:22:41.23:0,41,188	0/0:7,0:17:25.10:0,25,128	1/1:19,2:30:7.78:271,8,0	1/1:18,0:18:15.04:185,15,0	1/1:8,3:23:32.44:369,32,0	1/1:7,11:19:7.20:266,7,0	0/1:19,0:18:12.87:13,0,63	0/0:15,0:15:17.60:0,18,148	0/0:9,0:13:13.74:0,14,84	1/1:7,10:18:11.52:127,12,0	1/1:5,9:15:13.77:130,14,0	1/1:5,18:24:23.42:267,23,0	1/1:6,8:15:18.04:218,18,0	1/1:11,7:19:28.38:274,28,0	1/1:12,8:20:0.10:325,0,0	1/1:1,6:10:3.01:39,3,0	0/0:8,0:10:17.33:0,17,120	0/0:8,0:9:20.02:0,20,144	0/0:13,0:14:23.47:0,23,187	0/0:29,0:29:35.35:0,35,299	1/1:7,2:22:30.88:354,31,0	1/1:5,13:19:9.03:117,9,0	1/1:4,13:17:9.03:118,9,0
chr10	14263730	.	TG	T	138.70	PASS	AB=0.747;AC=14;AF=0.875;AN=16;BaseQRankSum=-0.354;DP=32;FS=7.404;HRun=3;HaplotypeScore=9.0939;MQ=166.87;MQ0=0;MQRankSum=-1.296;QD=7.30;ReadPosRankSum=-0.118;VQSLOD=0.1066;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/1:3,4:4:0:0,0,1	0/1:5,1:4:5.74:59,0,6	./.	./.	./.	1/1:1,0:1:3:27,3,0	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	1/1:1,0:1:3:27,3,0	1/1:1,0:1:2.99:23,3,0	1/1:1,0:1:2.99:24,3,0	./.	1/1:1,0:1:3:25,3,0	./.	1/1:1,0:1:3:26,3,0	./.	./.	./.
chr10	14267740	.	GCACA	G	4451.25	PASS	AB=0.755;AC=34;AF=0.607;AN=56;BaseQRankSum=-5.204;DP=638;FS=5.233;HRun=0;HaplotypeScore=116.5338;InbreedingCoeff=0.2271;MQ=69.99;MQ0=6;MQRankSum=1.244;QD=9.16;ReadPosRankSum=0.189;VQSLOD=3.8887;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:31,2:43:76.18:113,0,76	0/0:2,0:5:2.74:0,3,12	0/0:24,0:16:0.47:0,0,1	0/0:33,0:29:2.91:0,3,61	1/1:13,6:19:8.99:115,9,0	0/0:20,0:22:6.02:0,6,100	0/0:20,0:19:0.89:0,1,2	0/1:26,0:25:14.41:41,0,14	1/1:11,15:26:20.52:458,21,0	1/1:9,8:18:26.72:310,27,0	1/1:10,3:14:8.91:91,9,0	0/1:15,2:28:63.35:63,0,79	0/0:8,0:18:13.61:0,14,61	0/1:16,3:28:44.83:160,0,45	1/1:15,15:34:42.12:582,42,0	1/1:16,17:34:39.12:592,39,0	1/1:13,12:25:23.82:376,24,0	1/1:18,9:27:24.08:376,24,0	1/1:10,4:13:11.97:153,12,0	1/1:5,6:12:12:143,12,0	1/1:26,14:41:5.56:223,6,0	0/1:12,1:16:59.80:60,0,72	0/1:11,1:18:24.56:36,0,25	0/0:19,0:28:19.48:0,19,144	0/1:4,1:7:6.47:22,0,6	1/1:18,8:26:24.40:287,24,0	0/1:9,10:19:4.79:129,0,5	1/1:2,6:9:9.02:122,9,0
chr10	14272122	.	GCAT	G	117.80	PASS	AC=6;AF=0.375;AN=16;BaseQRankSum=2.083;DP=634;FS=26.946;HRun=0;HaplotypeScore=7.5486;MQ=11.84;MQ0=340;MQRankSum=0.386;QD=0.98;ReadPosRankSum=-1.003;VQSLOD=-0.1625;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	./.	0/0:38,0:2:6.02:0,6,138	./.	./.	./.	./.	./.	1/1:35,1:3:3.01:51,3,0	0/0:29,0:2:0.89:0,1,2	1/1:40,1:2:3.01:51,3,0	./.	./.	./.	./.	./.	./.	./.	0/0:36,0:5:12.04:0,12,276	0/0:23,0:2:3.01:0,3,69	1/1:41,2:8:6.02:101,6,0	./.	0/0:15,0:1:3:0,3,27	./.	./.
chr10	14275324	.	GA	G	4517.83	PASS	AB=0.890;AC=36;AF=0.643;AN=56;BaseQRankSum=3.834;DP=525;FS=3.602;HRun=11;HaplotypeScore=59.6187;InbreedingCoeff=0.6322;MQ=56.76;MQ0=5;MQRankSum=-1.422;QD=12.08;ReadPosRankSum=2.962;VQSLOD=4.6924;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:44:99:0,104,1062	1/1:4,1:5:11.95:92,12,0	0/0:33,0:13:4.39:0,4,50	0/1:30,2:16:9.08:9,0,42	1/1:7,13:21:1.26:322,1,0	0/0:14,0:14:30.07:0,30,317	0/1:12,3:15:37.84:38,0,251	1/1:6,10:16:26.86:210,27,0	1/1:5,2:7:8.98:73,9,0	1/1:8,16:25:26.67:368,27,0	1/1:4,10:14:23.97:196,24,0	0/0:12,0:12:33.08:0,33,348	0/0:14,1:15:8.44:0,8,295	0/0:13,0:15:26.90:0,27,270	1/1:5,11:16:29.94:246,30,0	1/1:6,12:18:4:239,4,0	1/1:7,38:45:69.88:781,70,0	1/1:3,16:20:37.98:301,38,0	1/1:10,11:22:34.97:276,35,0	1/1:4,18:22:43.74:349,44,0	1/1:5,10:15:23.94:193,24,0	0/1:15,2:18:1.38:1,0,359	0/0:8,0:8:12.01:0,12,118	0/0:9,0:9:21.05:0,21,224	0/1:13,2:15:7.26:7,0,306	1/1:3,16:19:18.95:355,19,0	1/1:4,13:17:6.91:256,7,0	1/1:0,10:11:26.01:203,26,0
chr10	14277697	.	T	TC	582.84	PASS	AB=0.717;AC=7;AF=0.125;AN=56;BaseQRankSum=12.299;DP=821;FS=2.330;HRun=2;HaplotypeScore=142.9085;InbreedingCoeff=-0.1499;MQ=51.53;MQ0=1;MQRankSum=-10.927;QD=2.87;ReadPosRankSum=4.182;VQSLOD=0.3149;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:44,1:45:77.14:0,77,1413	0/1:4,8:12:99:148,0,126	0/0:19,0:17:43.94:0,44,522	0/0:17,0:17:41.29:0,41,454	0/0:22,16:38:30.57:0,31,394	0/0:23,0:23:63.19:0,63,803	0/0:30,1:31:55.85:0,56,1058	0/0:21,1:22:60.19:0,60,778	0/0:27,1:28:58.24:0,58,913	0/1:37,16:53:99:204,0,1246	0/0:14,13:27:30.05:0,30,354	0/0:21,0:21:63.20:0,63,814	0/0:24,2:26:65.74:0,66,851	0/0:34,1:35:53.26:0,53,1155	0/0:33,0:33:86.93:0,87,1103	0/0:27,0:27:81.26:0,81,1051	0/0:31,0:31:87.28:0,87,1129	0/0:21,1:22:38.33:0,38,754	0/0:26,1:26:53.95:0,54,902	0/0:20,9:28:4.31:0,4,572	0/0:52,0:52:99:0,138,1775	0/1:10,12:22:99:127,0,275	0/1:30,13:43:9.01:9,0,725	0/0:39,0:39:99:0,102,1321	0/1:12,12:24:99:142,0,317	0/0:21,5:26:5.14:0,5,676	0/1:23,7:30:9.77:10,0,736	0/1:13,6:17:70.04:70,0,342
chr10	14277787	.	G	GTGTGTGTTGGGGGGGAG	32254.81	PASS	AB=0.885;AC=52;AF=0.929;AN=56;BaseQRankSum=-7.714;DP=337;FS=7.889;HRun=0;HaplotypeScore=389.4380;InbreedingCoeff=-0.1156;MQ=48.68;MQ0=0;MQRankSum=-1.202;QD=95.71;ReadPosRankSum=-0.101;VQSLOD=3.2941;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:12,0:12:7.68:878,0,8	1/1:3,0:3:6.02:318,6,0	0/1:6,0:6:45.94:383,0,46	0/1:4,1:6:16.25:598,0,16	1/1:19,0:19:26.68:1596,27,0	1/1:2,0:2:6.02:291,6,0	1/1:16,0:16:42.14:2494,42,0	1/1:15,0:15:42.12:1902,42,0	1/1:19,0:19:13.33:1656,13,0	1/1:15,0:15:22.87:1267,23,0	1/1:20,0:20:32.46:2083,32,0	1/1:15,0:15:6.41:1773,6,0	1/1:14,0:14:23.02:1574,23,0	1/1:14,0:14:31.82:1686,32,0	1/1:12,0:12:15.97:1173,16,0	1/1:8,0:8:14.26:927,14,0	1/1:7,0:7:15.05:789,15,0	1/1:3,0:3:3.01:214,3,0	1/1:13,0:13:27.45:1119,27,0	0/1:14,0:13:23.01:1018,0,23	1/1:10,0:10:12.93:503,13,0	1/1:10,0:10:2.21:791,2,0	1/1:12,0:12:21.11:737,21,0	1/1:13,0:13:15.53:1304,16,0	1/1:14,0:14:8.99:760,9,0	1/1:20,0:20:28.80:1446,29,0	1/1:18,0:18:36.47:2755,36,0	1/1:4,0:2:3.01:218,3,0
chr10	14281099	.	GTTT	G	8541.12	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=7.047;DP=468;FS=3.967;HRun=13;HaplotypeScore=74.5384;InbreedingCoeff=0.9550;MQ=59.62;MQ0=2;MQRankSum=-2.836;QD=25.96;ReadPosRankSum=0.821;VQSLOD=4.1819;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:22:54.17:0,54,973	1/1:1,10:11:27.07:328,27,0	0/0:10,1:7:8.02:0,8,122	0/0:11,0:7:11.78:0,12,90	1/1:6,22:29:55.39:689,55,0	1/1:0,11:11:24.07:292,24,0	1/1:1,10:11:18.03:219,18,0	1/1:7,22:30:66.03:759,66,0	1/1:2,11:13:36.08:424,36,0	1/1:2,12:14:31.43:399,31,0	1/1:1,18:18:50.99:598,51,0	0/0:15,0:16:42.12:0,42,707	0/0:4,0:4:8.93:0,9,154	0/0:16,0:16:33.11:0,33,630	1/1:5,15:21:41.99:492,42,0	1/1:1,17:18:48.12:584,48,0	1/1:5,19:25:47.70:565,48,0	1/1:3,11:12:21.03:255,21,0	1/1:6,11:17:30:365,30,0	1/1:4,28:33:73.49:908,73,0	1/1:1,8:9:5.96:73,6,0	0/0:8,0:9:24.08:0,24,459	0/0:14,0:15:33.10:0,33,588	0/0:8,0:9:19.31:0,19,349	0/0:22,0:24:63.10:0,63,1087	1/1:3,18:22:60.09:698,60,0	1/1:1,23:24:57.17:693,57,0	1/1:0,6:7:17.97:200,18,0
chr10	14281265	.	T	TGG	6059.81	PASS	AB=0.989;AC=33;AF=0.589;AN=56;BaseQRankSum=-2.644;DP=671;FS=49.422;HRun=9;HaplotypeScore=111.0561;InbreedingCoeff=0.8738;MQ=79.30;MQ0=13;MQRankSum=-1.673;QD=15.30;ReadPosRankSum=0.030;VQSLOD=-0.4684;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:81.16:0,81,851	1/1:5,1:6:4.83:51,5,0	0/1:85,0:38:67.62:68,0,129	0/0:77,0:41:7.73:0,8,185	1/1:8,14:23:35.36:500,35,0	0/0:17,0:17:48.12:0,48,511	0/0:20,0:20:51.09:0,51,543	1/1:10,3:15:5.38:55,5,0	1/1:8,13:23:38.49:561,38,0	1/1:11,10:21:30.10:460,30,0	1/1:6,7:14:17.42:239,17,0	0/0:21,0:21:51.10:0,51,542	0/0:17,0:17:45.10:0,45,478	0/0:14,0:14:36.09:0,36,383	1/1:7,13:21:33.11:488,33,0	1/1:10,10:19:27.05:388,27,0	1/1:9,22:31:57.19:864,57,0	1/1:10,8:20:28.94:368,29,0	1/1:7,8:18:28.78:358,29,0	1/1:9,10:20:26.22:322,26,0	1/1:6,13:21:23.44:331,23,0	0/0:9,0:9:24.04:0,24,248	0/0:19,0:20:51.11:0,51,542	0/0:21,0:21:63.13:0,63,661	0/0:25,0:25:57.07:0,57,589	1/1:11,12:23:29.96:407,30,0	1/1:11,17:28:32.14:467,32,0	1/1:0,4:5:11.52:133,12,0
chr10	14282211	.	T	TA	816.60	PASS	AB=0.944;AC=5;AF=0.089;AN=56;BaseQRankSum=-6.336;DP=599;FS=2.301;HRun=9;HaplotypeScore=56.3288;InbreedingCoeff=0.7596;MQ=78.44;MQ0=2;MQRankSum=0.969;QD=13.61;ReadPosRankSum=0.520;VQSLOD=3.4512;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:46.30:0,46,545	0/0:18,0:18:44.97:0,45,388	0/1:16,0:13:8.99:9,0,104	0/0:16,0:14:6.18:0,6,76	0/0:22,0:22:59.73:0,60,506	1/1:5,19:25:50.97:545,51,0	1/1:4,13:18:16.38:387,16,0	0/0:37,0:37:89.94:0,90,774	0/0:20,0:20:56.97:0,57,491	0/0:30,0:30:77.97:0,78,673	0/0:25,0:25:47.97:0,48,417	0/0:16,0:16:38.97:0,39,338	0/0:30,0:30:77.98:0,78,677	0/0:21,0:21:56.99:0,57,495	0/0:22,0:22:50.94:0,51,436	0/0:23,0:23:35.49:0,35,470	0/0:12,0:12:29.95:0,30,256	0/0:19,0:19:50.99:0,51,443	0/0:17,0:17:44.57:0,45,372	0/0:34,0:34:92.97:0,93,805	0/0:14,0:14:41.99:0,42,365	0/0:23,0:23:50.96:0,51,441	0/0:23,0:23:50.97:0,51,443	0/0:17,0:17:41.92:0,42,353	0/0:17,0:17:44.96:0,45,387	0/0:25,0:25:65.98:0,66,573	0/0:15,0:15:38.99:0,39,338	0/0:20,0:20:47.97:0,48,417
chr10	14285359	.	GTGGC	G	541.62	PASS	AB=1.000;AC=13;AF=0.260;AN=50;BaseQRankSum=5.491;DP=204;FS=6.340;HRun=0;HaplotypeScore=42.8765;InbreedingCoeff=0.0821;MQ=42.80;MQ0=13;MQRankSum=-6.452;QD=7.22;ReadPosRankSum=3.507;VQSLOD=0.5451;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:8:21.06:0,21,378	1/1:4,0:4:11.41:72,11,0	0/0:27,0:8:16.82:0,17,361	0/0:25,0:8:15.49:0,15,342	0/0:12,0:12:11.42:0,11,291	0/1:12,0:12:99:240,0,130	0/1:5,0:5:67.48:81,0,67	0/1:10,0:9:20.36:20,0,339	0/0:4,0:4:6.02:0,6,161	0/0:7,0:7:3.01:0,3,297	./.	0/0:5,0:5:11.95:0,12,215	0/0:4,0:4:11.99:0,12,246	0/0:8,0:8:21.07:0,21,488	0/1:12,0:12:86.30:86,0,396	./.	0/1:4,0:4:11.95:12,0,156	./.	0/0:9,0:8:18:0,18,337	0/0:4,0:4:5.72:0,6,131	0/1:13,0:10:25.79:26,0,115	0/0:7,0:7:9.41:0,9,147	0/0:3,0:3:9.03:0,9,196	0/0:1,0:1:3.01:0,3,80	0/0:3,0:3:6.02:0,6,128	1/1:3,0:3:6.02:66,6,0	1/1:0,5:5:3.01:42,3,0	0/1:7,0:7:43.15:43,0,158
chr10	14286130	.	G	GT	3196.95	PASS	AB=0.737;AC=33;AF=0.589;AN=56;BaseQRankSum=-3.594;DP=479;FS=2.105;HRun=13;HaplotypeScore=56.7902;InbreedingCoeff=0.0286;MQ=60.17;MQ0=7;MQRankSum=-0.213;QD=8.18;ReadPosRankSum=0.079;VQSLOD=2.3787;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,1:28:33.31:0,33,344	1/1:2,7:9:3.28:161,3,0	0/0:27,0:12:7.18:0,7,47	0/1:18,0:5:0.19:0,0,0	0/1:9,9:18:20.25:218,0,20	1/1:7,0:9:1.65:46,2,0	1/1:8,0:11:16.22:82,16,0	0/1:10,12:22:1.32:254,0,1	1/1:2,12:14:11.14:125,11,0	1/1:10,11:21:17.63:265,18,0	1/1:3,10:15:26.71:224,27,0	0/0:12,0:12:29.31:0,29,158	0/0:5,0:5:6.51:0,7,45	0/0:14,0:14:28.53:0,29,187	1/1:7,9:16:0.63:146,1,0	0/1:5,8:14:44.41:88,0,44	1/1:2,19:24:41.52:349,42,0	0/1:6,14:21:22.73:225,0,23	0/1:19,11:29:34.81:254,0,35	0/1:8,11:19:17.67:136,0,18	1/1:4,6:10:15.02:139,15,0	0/1:5,2:7:18.42:18,0,32	0/1:10,1:11:19.56:20,0,116	0/1:13,2:13:36.93:37,0,94	0/1:23,2:25:2.82:3,0,274	0/1:10,12:22:8.34:234,0,8	1/1:5,15:18:3.27:174,3,0	0/1:4,8:14:11.45:166,0,11
chr10	14288613	.	TA	T	17422.71	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=12.822;DP=770;FS=9.624;HRun=2;HaplotypeScore=76.0600;InbreedingCoeff=1.0000;MQ=74.68;MQ0=0;MQRankSum=-4.141;QD=36.15;ReadPosRankSum=1.918;VQSLOD=5.1191;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,141,2112	1/1:0,13:13:39.13:506,39,0	0/0:19,0:19:56.77:0,57,765	0/0:30,0:30:80.86:0,81,1023	1/1:1,25:26:75.18:952,75,0	1/1:0,25:25:69.22:896,69,0	1/1:1,28:30:77.46:981,77,0	1/1:0,25:25:75.19:918,75,0	1/1:0,31:31:87.28:1129,87,0	1/1:0,36:36:99:1351,108,0	1/1:0,19:19:48.07:598,48,0	0/0:28,0:28:84.28:0,84,1255	0/0:26,0:26:78.26:0,78,1169	0/0:24,0:24:72.23:0,72,1059	1/1:0,34:34:99:1282,99,0	1/1:0,26:26:69.22:896,69,0	1/1:2,23:25:69.22:896,69,0	1/1:0,34:34:96.31:1246,96,0	1/1:1,21:22:63.19:804,63,0	1/1:0,21:21:63.20:818,63,0	1/1:1,33:34:93.30:1207,93,0	0/0:29,0:29:87.29:0,87,1302	0/0:26,0:26:78.25:0,78,1149	0/0:27,0:27:75.25:0,75,1122	0/0:32,0:32:96.33:0,96,1439	1/1:1,23:24:69.20:879,69,0	1/1:0,28:28:72.23:934,72,0	1/1:0,29:29:87.28:1129,87,0
chr10	14293971	.	C	CT	1250.53	PASS	AB=0.947;AC=7;AF=0.125;AN=56;BaseQRankSum=-7.723;DP=676;FS=8.063;HRun=11;HaplotypeScore=73.2837;InbreedingCoeff=0.5319;MQ=70.74;MQ0=0;MQRankSum=-0.573;QD=11.37;ReadPosRankSum=0.919;VQSLOD=2.8975;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,113,882	0/1:13,1:14:0.59:1,0,179	0/0:20,0:21:29.19:0,29,208	0/1:20,0:18:7.28:7,0,86	0/0:22,0:22:56.75:0,57,441	1/1:1,22:23:60.12:609,60,0	1/1:5,27:33:57.76:752,58,0	0/0:34,0:34:62.72:0,63,488	0/0:16,0:16:38.83:0,39,302	0/0:30,0:30:62.71:0,63,487	0/0:18,1:19:23.34:0,23,362	0/0:34,0:35:79.62:0,80,603	0/0:24,0:25:58.76:0,59,442	0/0:26,0:26:62.67:0,63,481	0/0:24,0:24:50.75:0,51,394	0/0:26,0:26:65.71:0,66,511	0/0:30,0:30:74.68:0,75,577	0/0:26,0:26:56.69:0,57,441	0/0:22,0:25:44.89:0,45,314	0/0:21,2:24:11.70:0,12,372	0/0:15,1:16:2.42:0,2,202	0/0:19,0:19:50.79:0,51,393	0/0:21,0:21:50.79:0,51,394	0/0:14,0:14:35.86:0,36,278	0/0:27,0:28:64.75:0,65,491	0/1:18,2:20:13.12:13,0,274	0/0:22,1:24:16.38:0,16,300	0/0:9,0:9:20.92:0,21,163
chr10	14295239	.	TC	T	13918.50	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=14.508;DP=708;FS=1.565;HRun=2;HaplotypeScore=77.7933;InbreedingCoeff=0.9997;MQ=80.78;MQ0=0;MQRankSum=-4.860;QD=35.06;ReadPosRankSum=1.275;VQSLOD=5.2825;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,135,1980	1/1:0,13:13:36.12:467,36,0	0/0:15,0:15:45.11:0,45,630	0/0:23,0:23:66.19:0,66,923	1/1:0,25:25:66.21:854,66,0	0/0:18,0:18:51.17:0,51,764	0/0:21,0:21:63.21:0,63,944	1/1:0,28:28:81.23:1022,81,0	1/1:0,26:26:69.22:896,69,0	1/1:0,24:24:72.23:932,72,0	1/1:0,12:12:33.11:428,33,0	0/0:36,0:36:99:0,108,1580	0/0:25,0:25:72.23:0,72,1057	0/0:37,0:37:99:0,111,1634	1/1:0,35:35:96.31:1246,96,0	1/1:0,32:32:84.27:1091,84,0	1/1:0,36:36:99:1278,99,0	1/1:1,18:19:51.17:662,51,0	1/1:0,14:14:42.14:545,42,0	1/1:0,10:10:30.10:384,30,0	1/1:1,56:57:99:1830,141,0	0/0:14,0:14:42.14:0,42,628	0/0:16,0:16:48.14:0,48,680	0/0:36,0:36:99:0,108,1547	0/0:23,0:23:66.21:0,66,967	1/1:1,30:31:90.28:1155,90,0	1/1:1,23:24:60.19:777,60,0	1/1:0,11:11:27.09:350,27,0
chr10	14296011	.	C	CT	5761.67	PASS	AB=0.788;AC=34;AF=0.607;AN=56;BaseQRankSum=4.437;DP=653;FS=6.905;HRun=12;HaplotypeScore=107.6449;InbreedingCoeff=0.4253;MQ=59.42;MQ0=2;MQRankSum=-8.802;QD=12.03;ReadPosRankSum=-2.359;VQSLOD=3.6763;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:36,4:42:30.63:31,0,538	1/1:3,6:9:23.40:209,23,0	0/0:25,0:18:0.36:0,0,109	0/1:22,0:15:8.25:8,0,62	1/1:15,14:28:4.82:350,5,0	1/1:14,0:18:16.83:96,17,0	1/1:24,1:27:32.54:164,33,0	0/1:21,11:31:49.38:375,0,49	1/1:7,10:20:19.73:313,20,0	0/1:5,19:24:4.40:429,0,4	1/1:11,14:27:2.41:448,2,0	0/0:24,0:24:65.26:0,65,461	0/0:23,0:25:43.66:0,44,312	0/0:23,1:24:33.41:0,33,404	1/1:18,17:35:6.09:517,6,0	1/1:5,11:17:42.05:399,42,0	1/1:11,13:25:34.79:455,35,0	1/1:17,11:29:0.08:440,0,0	1/1:10,12:23:26.09:399,26,0	0/1:6,14:20:10.75:229,0,11	1/1:6,6:12:14.98:136,15,0	0/0:16,1:18:2.27:0,2,157	0/0:14,0:14:32.79:0,33,241	0/0:12,0:13:28.72:0,29,203	0/0:24,0:28:62.06:0,62,442	1/1:12,8:21:27.45:272,27,0	1/1:19,15:33:50.70:451,51,0	0/1:11,1:11:12.93:41,0,13
chr10	14296033	.	C	CT	7388.17	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=3.425;DP=607;FS=18.558;HRun=7;HaplotypeScore=94.7777;InbreedingCoeff=0.9664;MQ=45.51;MQ0=6;MQRankSum=-11.105;QD=19.60;ReadPosRankSum=-2.312;VQSLOD=3.0397;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:96.14:0,96,920	1/1:2,8:11:24.06:271,24,0	0/0:23,0:10:21.16:0,21,143	0/0:17,0:7:8.18:0,8,54	1/1:7,22:28:44.79:486,45,0	1/1:6,8:14:27.08:326,27,0	1/1:15,9:22:24.03:273,24,0	1/1:13,16:28:63.09:718,63,0	1/1:8,15:23:45.12:527,45,0	1/1:10,15:24:45.14:541,45,0	1/1:9,15:24:48:510,48,0	0/0:22,0:22:48.06:0,48,463	0/0:26,0:26:60.08:0,60,576	0/0:29,0:29:57.03:0,57,533	1/1:11,19:30:51.11:599,51,0	1/1:4,14:18:42.12:497,42,0	1/1:12,11:22:33.10:398,33,0	1/1:11,14:25:45.14:543,45,0	1/1:11,7:18:30.08:350,30,0	1/1:11,3:14:9.03:109,9,0	1/1:3,6:9:12:129,12,0	0/0:21,0:21:39.04:0,39,374	0/0:16,0:16:38.54:0,39,350	0/0:14,0:14:36.06:0,36,348	0/0:26,0:25:45:0,45,419	1/1:8,12:20:33.10:398,33,0	1/1:10,25:33:51.15:604,51,0	1/1:2,3:4:9.03:109,9,0
chr10	14297853	.	GT	G	15256.03	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=15.903;DP=891;FS=1.392;HRun=4;HaplotypeScore=86.4893;InbreedingCoeff=0.9989;MQ=82.25;MQ0=0;MQRankSum=-2.824;QD=31.65;ReadPosRankSum=2.331;VQSLOD=5.3107;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:66,0:65:99:0,184,2560	1/1:0,21:21:57.06:684,57,0	0/0:31,0:31:89.27:0,89,1171	0/0:18,0:18:36.76:0,37,630	1/1:5,30:35:81.25:972,81,0	0/0:20,0:20:57.18:0,57,781	0/0:32,0:32:96.31:0,96,1325	1/1:2,32:34:93.29:1116,93,0	1/1:1,30:31:78.24:936,78,0	1/1:2,26:28:81.17:925,81,0	1/1:1,21:22:60.18:717,60,0	0/0:36,0:36:96.32:0,96,1343	0/0:45,0:45:99:0,129,1756	0/0:36,0:36:99:0,105,1463	1/1:1,36:37:93.29:1116,93,0	1/1:0,37:37:99:1260,105,0	1/1:3,38:41:99:1224,102,0	1/1:0,20:20:51.16:612,51,0	1/1:1,20:21:60.16:695,60,0	1/1:0,21:21:51.15:608,51,0	1/1:1,55:56:99:1800,150,0	0/0:29,0:29:87.29:0,87,1217	0/0:27,0:27:78.26:0,78,1092	0/0:36,0:36:99:0,102,1406	0/0:33,0:33:93.31:0,93,1301	1/1:3,31:34:93.28:1115,93,0	1/1:0,37:37:99:1260,105,0	1/1:0,7:7:18.06:216,18,0
chr10	14298651	.	C	CT	1892.78	PASS	AB=0.874;AC=30;AF=0.556;AN=54;BaseQRankSum=0.825;DP=314;FS=2.574;HRun=14;HaplotypeScore=66.3789;InbreedingCoeff=0.2978;MQ=72.61;MQ0=7;MQRankSum=-3.609;QD=8.27;ReadPosRankSum=-3.365;VQSLOD=1.9766;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:15,1:15:5.59:6,0,107	0/1:3,4:7:26.62:85,0,27	0/0:21,0:10:6.18:0,6,27	0/0:18,0:9:8.16:0,8,46	1/1:6,5:12:21.75:172,22,0	0/1:4,0:9:13.48:17,0,13	0/0:5,0:9:6.07:0,6,18	1/1:11,9:22:25.30:270,25,0	1/1:3,1:4:5.60:37,6,0	0/1:10,3:13:1.23:110,0,1	1/1:8,4:12:9.69:103,10,0	0/1:9,0:11:10.75:11,0,53	0/0:5,0:5:4.15:0,4,22	0/0:5,0:5:7.91:0,8,43	1/1:5,5:10:18.62:144,19,0	0/1:9,6:14:10.30:152,0,10	1/1:11,3:14:6.42:145,6,0	0/1:14,2:16:14.93:113,0,15	1/1:12,5:17:26.86:216,27,0	1/1:4,8:12:3.88:144,4,0	0/1:5,0:5:0:0,0,0	0/0:6,0:6:5.79:0,6,33	0/0:2,0:2:5.91:0,6,38	./.	0/0:19,0:19:6.28:0,6,166	1/1:6,0:6:7.24:56,7,0	1/1:8,4:12:20.50:166,21,0	1/1:13,3:16:2.40:114,2,0
chr10	14298679	.	C	CT	4005.65	PASS	AB=0.957;AC=35;AF=0.700;AN=50;BaseQRankSum=-0.141;DP=256;FS=2.657;HRun=9;HaplotypeScore=41.5594;InbreedingCoeff=0.7527;MQ=67.74;MQ0=10;MQRankSum=-3.319;QD=21.08;ReadPosRankSum=0.432;VQSLOD=3.9194;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:12:29.99:0,30,260	1/1:0,5:5:15.04:166,15,0	0/0:18,0:7:5.20:0,5,29	0/1:21,0:12:22.74:23,0,36	1/1:4,5:8:15.04:166,15,0	1/1:2,12:13:33.09:365,33,0	1/1:0,5:5:15.04:166,15,0	1/1:9,16:24:54.12:581,54,0	1/1:0,2:2:6.02:66,6,0	1/1:2,4:6:12.03:133,12,0	1/1:1,9:10:24.06:265,24,0	0/0:8,0:8:14.98:0,15,130	0/0:3,0:3:8.99:0,9,76	0/0:3,0:3:8.98:0,9,74	1/1:3,6:9:4.67:183,5,0	1/1:2,6:7:15.04:166,15,0	1/1:2,14:13:36.10:398,36,0	1/1:4,12:16:30.95:325,31,0	1/1:2,7:9:21.06:232,21,0	1/1:5,2:7:11.06:106,11,0	./.	./.	0/0:2,0:2:6:0,6,52	./.	0/0:15,0:15:26.93:0,27,227	1/1:1,2:3:6.02:66,6,0	1/1:2,8:10:18.05:199,18,0	1/1:1,13:13:38.97:400,39,0
chr10	14299602	.	TGTGCAATGA	T	14763.33	PASS	AB=0.619;AC=35;AF=0.625;AN=56;BaseQRankSum=15.937;DP=666;FS=1.603;HRun=0;HaplotypeScore=217.7483;InbreedingCoeff=0.8656;MQ=84.12;MQ0=0;MQRankSum=-15.270;QD=40.67;ReadPosRankSum=-0.617;VQSLOD=4.6274;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,126,5724	0/1:5,8:13:99:659,0,250	0/0:24,0:24:30.03:0,30,996	0/0:28,0:28:51.15:0,51,1857	1/1:9,26:35:4.03:167,4,0	1/1:7,15:22:45.15:1276,45,0	1/1:10,21:31:51.17:1397,51,0	1/1:8,13:21:39.13:1002,39,0	1/1:7,17:24:45.15:1291,45,0	1/1:12,19:31:60.15:1593,60,0	1/1:7,18:25:20.62:554,21,0	0/0:36,0:36:96.33:0,96,4405	0/0:30,0:30:75.26:0,75,3326	0/0:34,0:34:81.27:0,81,3452	1/1:1,19:20:42.14:1205,42,0	1/1:3,9:12:24.08:689,24,0	1/1:5,9:14:18.06:517,18,0	1/1:5,8:13:18.06:516,18,0	1/1:9,11:20:33.10:801,33,0	1/1:2,17:19:18.06:515,18,0	1/1:10,12:22:9.03:257,9,0	0/0:23,0:23:54.19:0,54,2474	0/0:25,0:25:66.23:0,66,2908	0/0:33,0:33:87.30:0,87,3897	0/0:18,0:18:42.14:0,42,1927	1/1:6,14:20:42.14:1205,42,0	1/1:1,13:14:36.12:1033,36,0	1/1:4,3:7:3.01:86,3,0
chr10	14300137	.	CT	C	466.75	PASS	AB=0.872;AC=7;AF=0.125;AN=56;BaseQRankSum=3.881;DP=646;FS=2.288;HRun=13;HaplotypeScore=75.5650;InbreedingCoeff=0.2156;MQ=67.54;MQ0=3;MQRankSum=0.207;QD=4.67;ReadPosRankSum=0.811;VQSLOD=1.9574;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:39,2:42:52.12:0,52,798	0/1:4,1:5:9.82:10,0,76	0/1:15,1:11:1.34:1,0,115	0/1:16,0:9:10.26:10,0,23	0/0:24,1:29:37.05:0,37,625	0/1:7,16:23:11.52:241,0,12	1/1:8,20:29:44.72:321,45,0	0/0:35,3:39:8.38:0,8,489	0/0:16,0:16:39.01:0,39,370	0/0:23,1:24:23.36:0,23,351	0/0:18,0:22:45.38:0,45,403	0/0:15,0:16:32.56:0,33,288	0/0:19,0:20:47.12:0,47,426	0/0:18,0:18:36.03:0,36,338	0/0:26,1:30:40.09:0,40,557	0/0:17,2:20:10.09:0,10,402	0/0:30,3:33:28.97:0,29,566	0/0:20,0:22:50.51:0,51,460	0/0:22,1:24:24.90:0,25,377	0/0:24,1:26:8.32:0,8,358	0/1:8,0:10:6.98:7,0,127	0/0:18,1:20:32:0,32,453	0/0:17,1:20:10.61:0,11,280	0/0:24,1:25:10.26:0,10,417	0/0:23,2:26:15.31:0,15,489	0/0:32,1:33:62.13:0,62,740	0/0:24,3:29:18.61:0,19,456	0/0:11,0:11:24.04:0,24,233
chr10	14301583	.	GTGTGTGTGTGTGTGTGTGTGTGGT	G	2037.32	PASS	AB=0.977;AC=26;AF=0.464;AN=56;BaseQRankSum=2.133;DP=651;FS=10.277;HRun=0;HaplotypeScore=184.4369;InbreedingCoeff=0.4019;MQ=36.59;MQ0=145;MQRankSum=0.413;QD=5.60;ReadPosRankSum=-0.844;VQSLOD=1.6080;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:22:17.41:0,17,715	1/1:4,0:4:9.03:115,9,0	0/0:3,0:1:3.01:0,3,38	0/0:7,0:2:6.02:0,6,74	1/1:12,9:14:0.88:2,1,0	0/0:28,0:26:7.48:0,7,315	0/0:40,0:33:24.45:0,24,337	1/1:14,0:8:2.95:20,3,0	1/1:24,0:17:18.99:184,19,0	0/1:21,0:12:99:147,0,357	1/1:10,0:7:3.01:35,3,0	0/0:28,0:20:33.96:0,34,745	0/0:27,0:20:41:0,41,1597	0/0:25,0:16:21.94:0,22,532	0/1:31,0:21:20.42:199,0,20	0/1:24,0:19:34.59:166,0,35	1/1:32,0:22:25.53:444,26,0	0/1:33,0:21:39.38:184,0,39	1/1:11,0:10:12.40:107,12,0	1/1:13,0:8:3.01:32,3,0	1/1:71,0:52:14.53:120,15,0	0/0:17,0:16:30.24:0,30,809	0/0:15,0:11:15.03:0,15,264	0/0:39,0:29:37.53:0,38,713	0/0:27,0:20:12.51:0,13,210	0/1:14,0:11:10.06:132,0,10	1/1:14,0:14:16.86:264,17,0	0/1:15,0:7:76.75:77,0,166
chr10	14301605	.	GGT	G	2188.92	PASS	AB=0.985;AC=34;AF=0.630;AN=54;BaseQRankSum=-1.204;DP=628;FS=0.000;HRun=0;HaplotypeScore=94.1070;InbreedingCoeff=0.3539;MQ=37.75;MQ0=131;MQRankSum=1.028;QD=4.85;ReadPosRankSum=0.210;VQSLOD=2.3825;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:19:5.09:5,0,49	1/1:3,0:2:6.02:69,6,0	./.	0/0:3,0:1:3.01:0,3,37	1/1:19,0:14:0.47:1,0,0	1/1:25,0:23:0.48:1,0,0	0/0:45,0:38:12.28:0,12,77	1/1:21,9:20:25.39:284,25,0	1/1:20,5:18:23.28:271,23,0	0/1:21,1:12:41.74:54,0,42	1/1:13,1:12:11.87:138,12,0	0/1:25,0:17:19.16:19,0,120	0/0:26,1:21:8.24:0,8,234	0/0:19,0:11:16.67:0,17,158	0/1:28,0:20:19.74:196,0,20	0/1:20,1:18:32.61:183,0,33	1/1:24,2:17:23.46:265,23,0	1/1:18,15:26:5.85:48,6,0	1/1:12,0:11:8.05:75,8,0	1/1:13,0:8:3.01:32,3,0	1/1:60,8:55:26.83:286,27,0	0/0:11,0:10:5.21:0,5,113	0/1:10,0:6:8.13:8,0,76	0/0:42,0:32:33.09:0,33,445	0/0:28,0:21:8.02:0,8,157	1/1:10,7:12:20.94:186,21,0	1/1:14,1:14:17.38:206,17,0	1/1:15,0:7:3.01:34,3,0
chr10	14303548	.	TG	T	1497.94	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.074;DP=713;FS=13.381;HRun=4;HaplotypeScore=67.7929;InbreedingCoeff=0.9974;MQ=72.03;MQ0=0;MQRankSum=-0.439;QD=29.37;ReadPosRankSum=0.105;VQSLOD=2.2904;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,123,1703	0/0:12,0:12:33.11:0,33,462	0/0:13,0:12:21.54:0,22,272	0/0:14,0:14:27.06:0,27,338	0/0:23,0:23:57.17:0,57,777	1/1:0,18:18:48.15:576,48,0	1/1:1,32:33:87.27:1044,87,0	0/0:19,0:19:48.15:0,48,657	0/0:35,0:35:99:0,105,1419	0/0:29,0:29:78.21:0,78,1069	0/0:17,0:17:42.14:0,42,575	0/0:31,0:31:90.27:0,90,1225	0/0:21,0:21:63.21:0,63,882	0/0:27,0:27:81.22:0,81,1067	0/0:30,0:30:87.27:0,87,1186	0/0:27,0:27:81.26:0,81,1117	0/0:26,0:26:72.24:0,72,1006	0/0:26,0:26:72.22:0,72,987	0/0:25,0:25:69.22:0,69,950	0/0:29,0:29:78.26:0,78,1091	0/0:35,0:35:99:0,105,1469	0/0:21,0:21:63.18:0,63,845	0/0:23,0:23:66.21:0,66,904	0/0:31,1:32:60.27:0,60,1211	0/0:20,0:20:51.17:0,51,712	0/0:40,0:40:99:0,120,1613	0/0:28,0:25:81.25:0,81,1100	0/0:16,0:16:48.16:0,48,670
chr10	14304062	.	G	GGCCTGTCATTCCTGACCGTCAT	85379.64	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=5.091;DP=650;FS=10.175;HRun=0;HaplotypeScore=346.6028;InbreedingCoeff=0.9985;MQ=65.90;MQ0=2;MQRankSum=-18.472;QD=191.86;ReadPosRankSum=1.952;VQSLOD=4.0442;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:72.25:0,72,3721	1/1:14,1:16:42.14:3439,42,0	0/0:17,0:17:44.10:0,44,1897	0/0:11,0:11:33.04:0,33,1465	1/1:19,0:19:30.08:2183,30,0	1/1:19,3:22:60.16:5188,60,0	1/1:36,0:36:99:7330,99,0	1/1:33,0:33:90.31:6516,90,0	1/1:29,9:40:99:9950,114,0	1/1:17,1:18:51.18:3559,51,0	1/1:12,2:14:19:1462,19,0	0/0:33,0:33:93.29:0,93,4613	0/0:21,0:21:57.20:0,57,3404	0/0:25,0:25:63.21:0,63,3512	1/1:25,8:35:75.21:6199,75,0	1/1:18,7:28:75.26:6925,75,0	1/1:13,7:22:51.17:4191,51,0	1/1:15,3:21:48.16:4438,48,0	1/1:12,1:14:33.11:1937,33,0	1/1:18,1:21:48.64:2958,49,0	1/1:38,0:38:58.57:3710,59,0	0/0:18,0:18:36.12:0,36,1733	0/0:9,0:9:24.03:0,24,894	0/0:29,0:29:84.29:0,84,4678	0/0:13,0:13:36.12:0,36,1797	1/1:10,1:13:36.11:2438,36,0	1/1:26,7:37:99:9072,105,0	1/1:12,2:15:39.13:3883,39,0
chr10	14306659	.	ATTGGCACCTGCAGG	A	3370.77	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.560;DP=752;FS=2.608;HRun=0;HaplotypeScore=279.6497;InbreedingCoeff=0.9990;MQ=83.55;MQ0=0;MQRankSum=-8.577;QD=56.18;ReadPosRankSum=2.461;VQSLOD=3.2395;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,132,8805	0/0:13,0:13:39.09:0,39,2302	0/0:22,0:22:66.23:0,66,3678	0/0:24,0:24:69.18:0,69,2816	0/0:28,0:28:84.27:0,84,5423	1/1:5,15:20:27.09:1168,27,0	1/1:8,32:40:51.18:2203,51,0	0/0:35,0:35:99:0,105,5849	0/0:33,0:33:93.32:0,93,6049	0/0:22,0:22:66.23:0,66,4227	0/0:18,0:18:51.17:0,51,3414	0/0:36,0:36:99:0,102,6196	0/0:25,0:25:72.25:0,72,4884	0/0:23,0:23:69.21:0,69,4440	0/0:41,0:41:99:0,123,7998	0/0:41,0:41:99:0,123,7654	0/0:39,0:39:99:0,117,7763	0/0:22,0:22:66.23:0,66,4074	0/0:10,0:10:30.10:0,30,1776	0/0:30,0:30:87.30:0,87,5199	0/0:36,0:36:99:0,108,6406	0/0:19,0:19:57.19:0,57,3747	0/0:24,0:24:69.24:0,69,4684	0/0:36,0:36:99:0,108,7127	0/0:21,0:21:63.17:0,63,3804	0/0:21,0:21:63.22:0,63,4291	0/0:18,0:18:54.19:0,54,3664	0/0:11,0:11:33.11:0,33,2004
chr10	14307146	.	T	TGCGCGC	3158.64	PASS	AB=0.797;AC=28;AF=0.538;AN=52;BaseQRankSum=-3.162;DP=437;FS=2.090;HRun=0;HaplotypeScore=103.1397;InbreedingCoeff=0.6612;MQ=53.43;MQ0=6;MQRankSum=-1.319;QD=15.56;ReadPosRankSum=-3.402;VQSLOD=2.3487;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:39.12:0,39,798	1/1:9,0:9:12.04:225,12,0	./.	0/0:5,0:5:5.85:0,6,51	1/1:11,1:12:11.58:178,12,0	1/1:16,0:15:3.01:52,3,0	0/0:25,0:24:25.93:0,26,216	1/1:14,0:14:17.84:229,18,0	./.	0/1:6,14:21:21.40:444,0,21	1/1:6,0:6:3.01:63,3,0	0/0:20,0:20:19.22:0,19,353	0/0:18,0:18:16.41:0,16,276	0/0:24,0:24:20.66:0,21,403	1/1:8,0:8:3.01:48,3,0	1/1:8,0:8:17.78:300,18,0	0/1:29,0:28:9.30:181,0,9	1/1:3,17:21:8.76:84,9,0	1/1:5,11:18:34.56:425,35,0	1/1:8,0:7:8.99:160,9,0	0/0:4,18:22:2.84:0,3,14	0/0:13,0:13:12.04:0,12,264	0/0:10,0:10:12.51:0,13,239	0/0:25,0:25:23.78:0,24,449	0/0:18,0:18:27.09:0,27,522	1/1:15,2:16:36.62:497,37,0	1/1:9,0:9:19.91:288,20,0	1/1:3,3:5:1.59:175,2,0
chr10	14307153	.	GCACACA	G	606.45	PASS	AB=0.682;AC=13;AF=0.271;AN=48;BaseQRankSum=-1.181;DP=454;FS=4.490;HRun=0;HaplotypeScore=103.7903;InbreedingCoeff=0.5866;MQ=48.29;MQ0=8;MQRankSum=-2.642;QD=5.18;ReadPosRankSum=2.546;VQSLOD=1.5402;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:12,0:12:3.01:0,3,48	./.	./.	0/0:8,0:13:9.02:0,9,89	0/0:8,0:19:3.01:0,3,79	0/0:26,0:25:3.48:0,3,91	0/0:20,0:19:18.92:0,19,305	0/0:12,0:12:3.01:0,3,47	0/0:20,0:19:11.72:0,12,235	0/0:10,0:10:6.02:0,6,123	1/1:11,7:18:6.09:121,6,0	1/1:6,8:14:11.84:197,12,0	1/1:10,12:23:8.77:181,9,0	./.	0/0:11,0:11:6:0,6,102	0/0:5,0:32:6.02:0,6,152	0/0:23,0:23:17.52:0,18,338	0/0:16,0:16:13.60:0,14,279	0/0:10,0:9:0.89:0,1,2	0/0:27,0:26:9.03:0,9,277	0/1:8,7:15:0:1,0,0	1/1:7,4:10:0.47:1,0,0	1/1:12,8:20:5.92:121,6,0	1/1:11,3:16:6.90:123,7,0	0/0:17,0:17:28.65:0,29,643	0/0:8,0:9:9.03:0,9,186	0/0:6,0:5:12.04:0,12,260
chr10	14310864	.	GGGTTCGGTCCCCA	G	7073.16	PASS	AC=34;AF=0.630;AN=54;BaseQRankSum=6.214;DP=522;FS=3.095;HRun=0;HaplotypeScore=168.3489;InbreedingCoeff=0.8991;MQ=58.14;MQ0=5;MQRankSum=-8.370;QD=24.91;ReadPosRankSum=-1.777;VQSLOD=3.8355;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:66.21:0,66,3790	1/1:9,7:12:21.04:512,21,0	0/0:19,0:8:12.02:0,12,378	0/0:36,0:19:29.12:0,29,905	1/1:10,10:15:17.30:479,17,0	1/1:8,9:13:21.05:597,21,0	./.	1/1:21,0:20:8.95:81,9,0	1/1:10,5:13:15.05:557,15,0	1/1:20,10:22:27.09:722,27,0	1/1:12,5:13:12.03:261,12,0	0/0:17,0:17:45.15:0,45,2677	0/0:18,0:18:42.14:0,42,2125	0/0:15,0:15:36.12:0,36,2130	1/1:8,8:13:24.08:757,24,0	1/1:4,7:8:15.05:495,15,0	1/1:14,5:16:10.28:442,10,0	1/1:6,5:9:6.02:223,6,0	1/1:9,0:9:2.99:23,3,0	1/1:12,9:16:12.04:445,12,0	1/1:8,0:6:8.98:108,9,0	0/0:14,0:14:30.09:0,30,1687	0/0:25,0:25:60.04:0,60,3414	0/0:24,0:24:51.16:0,51,2834	0/0:32,0:32:84.28:0,84,4785	1/1:18,10:23:24.08:745,24,0	1/1:10,6:15:12.04:445,12,0	1/1:8,1:7:9:182,9,0
chr10	14310933	.	AAC	A	1424.87	PASS	AB=0.990;AC=22;AF=0.393;AN=56;BaseQRankSum=12.148;DP=590;FS=34.298;HRun=0;HaplotypeScore=149.7836;InbreedingCoeff=-0.0862;MQ=52.34;MQ0=17;MQRankSum=-1.363;QD=3.75;ReadPosRankSum=5.015;VQSLOD=1.0744;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:43:99:0,121,1613	0/1:12,0:12:15.33:15,0,33	0/1:15,0:5:8.52:9,0,88	0/0:25,0:5:5.95:0,6,55	0/1:32,1:32:99:123,0,145	1/1:15,0:15:36.06:361,36,0	1/1:16,0:16:37.69:305,38,0	0/1:24,0:22:54.31:144,0,54	0/1:16,0:16:11.12:11,0,84	0/1:26,1:27:32.11:139,0,32	0/1:21,0:19:35.44:63,0,35	0/0:18,0:18:51.07:0,51,659	0/0:17,0:17:51.12:0,51,747	0/0:20,0:20:60.11:0,60,830	0/1:17,0:17:31.31:31,0,54	0/1:13,0:13:6.95:7,0,59	0/1:25,1:24:41.66:53,0,42	0/1:24,0:24:24.70:25,0,55	0/1:24,1:15:38.74:39,0,149	1/1:37,0:36:15.34:136,15,0	0/0:8,0:6:0.56:0,1,43	0/0:14,0:14:42.08:0,42,565	0/0:23,0:23:63.09:0,63,847	0/0:18,0:17:48.12:0,48,709	0/0:23,0:23:69.11:0,69,925	0/1:28,0:28:83.69:84,0,145	0/1:23,0:22:23.44:23,0,93	1/1:8,0:8:5.57:32,6,0
chr10	14310937	.	AC	A	218.95	PASS	AB=0.968;AC=5;AF=0.089;AN=56;BaseQRankSum=6.526;DP=609;FS=5.041;HRun=1;HaplotypeScore=145.3842;InbreedingCoeff=0.7344;MQ=52.82;MQ0=17;MQRankSum=-6.735;QD=3.71;ReadPosRankSum=-0.152;VQSLOD=0.1068;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:42:99:0,111,1771	0/0:13,0:13:25.67:0,26,128	0/0:18,0:5:5.83:0,6,107	0/1:28,1:5:14.77:15,0,58	0/0:34,0:34:79.45:0,79,520	1/1:2,11:13:31.80:161,32,0	1/1:8,8:16:31.52:172,32,0	0/0:26,0:24:50.12:0,50,343	0/0:16,0:16:34.05:0,34,258	0/0:28,0:28:67.80:0,68,390	0/0:20,0:19:53.15:0,53,354	0/0:18,0:18:48.15:0,48,705	0/0:15,0:15:45.11:0,45,689	0/0:21,0:21:63.20:0,63,952	0/0:17,0:17:40.12:0,40,257	0/0:11,0:11:23.06:0,23,167	0/0:24,0:22:48.94:0,49,315	0/0:28,0:28:51.77:0,52,319	0/0:25,0:15:44.33:0,44,432	0/0:40,0:39:95.61:0,96,532	0/0:11,0:9:11.67:0,12,92	0/0:14,0:14:42.14:0,42,645	0/0:23,0:23:66.22:0,66,1021	0/0:17,0:16:48.16:0,48,750	0/0:23,0:23:69.21:0,69,1025	0/0:30,0:30:75.46:0,75,540	0/0:25,0:24:50.71:0,51,368	0/0:10,0:10:17.28:0,17,96
chr10	14310944	.	CAACAACAACA	C	1389.08	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=1.836;DP=613;FS=8.292;HRun=0;HaplotypeScore=224.9996;InbreedingCoeff=0.3142;MQ=52.74;MQ0=18;MQRankSum=1.543;QD=7.59;ReadPosRankSum=-7.208;VQSLOD=-0.5094;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:41:86.36:0,86,4590	0/0:11,0:11:2.15:0,2,274	0/1:18,0:4:3.44:3,0,179	0/1:28,0:4:7.11:7,0,101	0/1:33,0:33:47.32:47,0,611	1/1:17,0:16:25.58:526,26,0	1/1:11,8:19:35.90:775,36,0	0/1:31,0:29:74.23:74,0,519	0/0:16,0:16:30.01:0,30,399	0/0:29,0:29:12.86:0,13,818	0/0:20,0:19:24.02:0,24,511	0/0:14,0:14:36.09:0,36,1552	0/0:14,0:14:42.14:0,42,2048	0/0:18,0:18:51.17:0,51,2283	0/0:17,0:17:38.77:0,39,471	0/0:11,0:11:24.08:0,24,319	0/0:26,0:24:51.12:0,51,681	0/0:26,0:26:48.16:0,48,681	0/0:22,0:11:5.15:0,5,256	0/0:40,0:39:41:0,41,1220	0/0:11,0:9:9.03:0,9,118	0/0:15,0:15:42.14:0,42,1552	0/0:23,0:23:69.22:0,69,2661	0/0:16,0:16:45.15:0,45,2031	0/0:19,0:19:57.18:0,57,2478	0/1:36,0:36:99:101,0,760	0/0:24,0:23:47.96:0,48,577	0/0:16,0:16:17.52:0,18,225
chr10	14310947	.	CAACAACA	C	2386.56	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=3.719;DP=616;FS=5.072;HRun=0;HaplotypeScore=188.0308;InbreedingCoeff=0.1570;MQ=55.27;MQ0=18;MQRankSum=2.626;QD=8.20;ReadPosRankSum=-8.348;VQSLOD=-0.2682;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:39:97.88:0,98,3416	0/1:11,0:11:1.08:19,0,1	0/0:21,0:7:2.82:0,3,214	0/0:27,0:4:1.29:0,1,102	1/1:32,0:32:0.25:184,0,0	1/1:17,1:17:47.96:724,48,0	1/1:11,8:19:35.78:641,36,0	0/1:33,0:31:33.55:270,0,34	0/0:16,0:16:8.36:0,8,35	0/1:28,0:28:11.97:136,0,12	0/1:19,0:18:30.32:90,0,30	0/0:15,0:15:39.13:0,39,1194	0/0:16,0:16:48.16:0,48,1623	0/0:17,0:17:51.17:0,51,1754	0/1:17,0:17:4.35:17,0,4	0/0:12,0:12:11.20:0,11,47	0/0:26,0:24:20.39:0,20,89	0/0:26,0:26:14.04:0,14,54	0/1:21,0:10:25.97:47,0,26	0/1:40,0:39:90.01:160,0,90	0/0:11,0:9:4.71:0,5,21	0/0:14,0:14:42.09:0,42,1158	0/0:23,0:23:66.15:0,66,1969	0/0:15,0:15:45.15:0,45,1532	0/0:19,0:19:54.17:0,54,1828	0/1:36,0:36:43.71:255,0,44	0/0:24,0:23:8.72:0,9,24	0/1:17,0:17:3.05:3,0,29
chr10	14310950	.	CAACA	C	13732.80	PASS	AB=1.000;AC=37;AF=0.661;AN=56;BaseQRankSum=13.286;DP=608;FS=0.000;HRun=0;HaplotypeScore=113.7387;InbreedingCoeff=0.9202;MQ=55.69;MQ0=16;MQRankSum=-2.539;QD=32.24;ReadPosRankSum=0.871;VQSLOD=4.3114;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:38:92.91:0,93,2308	1/1:0,11:11:26.68:485,27,0	0/0:24,0:7:21.05:0,21,273	0/1:30,0:4:5.14:5,0,68	1/1:1,28:30:78.21:1254,78,0	1/1:9,9:17:48.07:620,48,0	1/1:18,0:18:32.87:411,33,0	1/1:2,29:30:54.04:1009,54,0	1/1:2,14:16:24.04:421,24,0	1/1:1,27:28:80.71:1330,81,0	1/1:3,16:18:51.02:772,51,0	0/0:16,0:16:42.13:0,42,872	0/0:17,0:17:50.76:0,51,1116	0/0:17,0:17:51.17:0,51,1182	1/1:1,15:16:36.08:648,36,0	1/1:2,10:12:18.06:346,18,0	1/1:3,22:23:42.07:769,42,0	1/1:1,25:26:48.11:863,48,0	1/1:13,9:11:27.01:383,27,0	1/1:3,37:39:99:1864,114,0	1/1:2,8:9:6.02:116,6,0	0/0:15,0:15:36.12:0,36,790	0/0:22,0:22:57.19:0,57,1299	0/0:15,0:15:45.13:0,45,1017	0/0:17,0:17:51.16:0,51,1192	1/1:4,31:35:73.20:1378,73,0	1/1:0,22:22:41.45:759,41,0	1/1:0,17:17:18.02:298,18,0
chr10	14310953	.	CA	C	5228.66	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=15.031;DP=594;FS=3.407;HRun=9;HaplotypeScore=110.1184;InbreedingCoeff=0.9627;MQ=58.00;MQ0=14;MQRankSum=-1.343;QD=13.87;ReadPosRankSum=1.588;VQSLOD=4.7975;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:38:99:0,102,1158	1/1:11,0:11:26.16:157,26,0	0/0:27,0:9:25.61:0,26,266	0/0:30,1:5:6.01:0,6,65	1/1:28,1:30:76.60:541,77,0	1/1:10,7:16:45.02:405,45,0	1/1:16,0:16:26.87:229,27,0	1/1:29,0:28:68.08:522,68,0	1/1:15,0:15:20.26:108,20,0	1/1:28,0:28:72.96:469,73,0	1/1:18,0:17:41.13:277,41,0	0/0:16,0:16:39.11:0,39,449	0/0:17,0:17:48.14:0,48,553	0/0:18,0:18:51.13:0,51,578	1/1:16,0:16:32.02:184,32,0	1/1:10,0:10:17.30:95,17,0	1/1:24,0:22:37.73:205,38,0	1/1:26,0:26:36.77:216,37,0	1/1:17,0:10:26.70:203,27,0	1/1:39,0:38:99:661,103,0	1/1:9,0:8:5.81:32,6,0	0/0:12,0:12:36.11:0,36,415	0/0:20,0:20:57.63:0,58,648	0/0:17,0:17:45.09:0,45,504	0/0:20,0:20:54.13:0,54,603	1/1:33,0:33:88.18:619,88,0	1/1:22,0:21:40.09:214,40,0	1/1:17,0:17:14.60:91,15,0
chr10	14311622	.	G	GA	784.70	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=0.342;DP=543;FS=2.659;HRun=7;HaplotypeScore=51.8399;InbreedingCoeff=0.9389;MQ=73.50;MQ0=0;MQRankSum=0.890;QD=21.80;ReadPosRankSum=0.510;VQSLOD=3.0820;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:87.13:0,87,834	0/0:8,0:8:18.03:0,18,174	0/0:14,0:15:26.78:0,27,239	0/0:4,0:4:6:0,6,56	0/0:35,0:35:96.14:0,96,920	1/1:1,15:16:36.11:435,36,0	1/1:3,17:20:39.12:471,39,0	0/0:28,0:28:66.07:0,66,627	0/0:34,0:34:93.14:0,93,892	0/0:14,0:14:33.05:0,33,318	0/0:27,0:27:75.12:0,75,723	0/0:16,0:16:42.05:0,42,400	0/0:13,0:13:36.05:0,36,348	0/0:18,0:18:51.08:0,51,492	0/0:15,0:15:36.05:0,36,347	0/0:19,0:19:54.07:0,54,516	0/0:20,0:20:54.08:0,54,521	0/0:18,0:18:48.07:0,48,463	0/0:23,0:23:54.06:0,54,510	0/0:24,0:24:72.10:0,72,689	0/0:8,0:8:24.04:0,24,232	0/0:18,0:18:51.07:0,51,486	0/0:17,0:17:45.04:0,45,420	0/0:19,0:19:51.07:0,51,487	0/0:19,0:19:51.08:0,51,492	0/0:26,0:26:69.08:0,69,661	0/0:33,0:33:90.14:0,90,869	0/0:6,0:6:18.03:0,18,174
chr10	14312894	.	TTTG	T	2680.74	PASS	AB=0.997;AC=27;AF=0.482;AN=56;BaseQRankSum=5.286;DP=542;FS=11.282;HRun=0;HaplotypeScore=133.8867;InbreedingCoeff=0.1825;MQ=57.66;MQ0=5;MQRankSum=-3.452;QD=7.41;ReadPosRankSum=0.349;VQSLOD=2.4193;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:42.35:0,42,801	0/1:8,0:8:33.33:33,0,83	0/1:19,0:8:2.63:3,0,71	0/0:16,0:9:2.26:0,2,52	0/1:24,0:24:45.61:208,0,46	1/1:11,6:16:36.55:448,37,0	1/1:13,2:14:40.78:379,41,0	1/1:25,0:20:15.79:170,16,0	0/1:29,1:28:83.19:203,0,83	1/1:24,0:23:32.91:294,33,0	0/1:26,0:25:36.88:159,0,37	0/0:24,0:24:72.21:0,72,1255	0/0:23,0:23:46.38:0,46,675	0/0:27,0:27:47.15:0,47,1087	1/1:20,0:20:0.14:61,0,0	0/1:10,0:10:10.12:10,0,67	1/1:18,0:16:21.41:117,21,0	1/1:17,0:17:30.78:183,31,0	0/1:21,0:19:11.86:127,0,12	0/1:21,0:18:68.40:100,0,68	1/1:14,0:13:19.74:126,20,0	0/0:14,0:14:33.45:0,33,619	0/0:18,0:18:46.91:0,47,791	0/0:14,0:14:24.16:0,24,534	0/0:21,0:21:56.52:0,57,828	0/1:15,0:15:64.78:96,0,65	0/1:28,0:28:53.63:117,0,54	0/1:10,0:8:34.80:38,0,35
chr10	14312895	.	TTG	T	4478.81	PASS	AB=0.974;AC=29;AF=0.518;AN=56;BaseQRankSum=6.802;DP=540;FS=7.035;HRun=0;HaplotypeScore=119.2704;InbreedingCoeff=0.4757;MQ=56.46;MQ0=5;MQRankSum=-5.115;QD=13.10;ReadPosRankSum=0.763;VQSLOD=4.1271;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:43.92:0,44,634	0/1:7,1:8:55.66:65,0,56	0/0:17,0:6:4.35:0,4,50	0/0:18,0:9:2.03:0,2,59	0/1:22,1:23:3.74:284,0,4	1/1:16,1:16:35.85:319,36,0	1/1:14,1:14:39.48:339,39,0	1/1:25,1:21:24.54:302,25,0	0/1:29,1:28:20.46:348,0,20	1/1:24,1:24:41.05:466,41,0	1/1:25,1:25:9.15:327,9,0	0/0:24,0:24:71.43:0,71,963	0/0:23,0:23:41.60:0,42,540	0/0:26,0:26:47.12:0,47,858	1/1:19,1:20:33.22:261,33,0	0/1:10,0:10:32.31:62,0,32	1/1:16,1:15:26.31:233,26,0	1/1:16,1:17:41.03:325,41,0	1/1:20,0:18:13.59:233,14,0	0/1:21,0:18:5.16:216,0,5	1/1:14,0:13:27.12:192,27,0	0/0:13,0:13:33.41:0,33,490	0/0:18,0:18:46.88:0,47,640	0/0:14,0:14:24.12:0,24,434	0/0:22,0:22:58.77:0,59,653	0/1:15,0:15:41.92:167,0,42	1/1:28,0:28:7.37:256,7,0	0/1:10,0:8:8.29:86,0,8
chr10	14312896	.	TG	T	6469.87	PASS	AB=0.843;AC=34;AF=0.607;AN=56;BaseQRankSum=7.734;DP=537;FS=2.651;HRun=1;HaplotypeScore=103.4567;InbreedingCoeff=0.7058;MQ=53.26;MQ0=5;MQRankSum=-5.596;QD=18.22;ReadPosRankSum=1.186;VQSLOD=5.2469;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:12.53:0,13,460	0/1:7,1:8:26.11:87,0,26	0/1:16,0:5:2.37:2,0,29	0/0:15,1:7:2.16:0,2,40	1/1:17,6:23:26.95:398,27,0	1/1:17,0:16:35.82:258,36,0	1/1:14,1:14:39.24:280,39,0	1/1:16,9:21:23.90:433,24,0	1/1:22,7:27:41.78:559,42,0	1/1:3,22:24:43.07:633,43,0	1/1:13,12:24:20.89:467,21,0	0/0:25,0:25:68.07:0,68,704	0/0:23,0:23:27.90:0,28,391	0/0:26,0:26:43.39:0,43,608	1/1:11,9:20:35.78:489,36,0	0/1:7,3:10:8.84:135,0,9	1/1:7,10:15:23.88:348,24,0	1/1:13,4:17:40.88:425,41,0	1/1:15,5:18:35.58:375,36,0	1/1:10,11:18:22.28:394,22,0	1/1:7,7:13:29.84:303,30,0	0/0:13,0:13:32.26:0,32,346	0/0:18,0:18:46.83:0,47,495	0/0:14,0:14:23.89:0,24,333	0/0:22,0:22:55.56:0,56,503	0/1:9,6:15:3.65:297,0,4	1/1:10,18:28:12.85:413,13,0	1/1:4,6:8:6.33:174,6,0
chr10	14312904	.	TG	T	750.72	PASS	AB=0.979;AC=21;AF=0.375;AN=56;BaseQRankSum=7.771;DP=544;FS=5.773;HRun=1;HaplotypeScore=124.2809;InbreedingCoeff=-0.2358;MQ=49.16;MQ0=8;MQRankSum=-7.310;QD=2.06;ReadPosRankSum=1.925;VQSLOD=-0.5713;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:37.32:0,37,570	0/1:8,0:8:24.71:43,0,25	0/1:17,1:4:15.41:15,0,32	0/1:15,2:6:0:0,0,0	0/1:20,0:20:19.50:20,0,60	0/0:16,0:15:16.38:0,16,201	0/1:16,0:15:17.09:17,0,98	0/1:30,0:25:80.02:80,0,88	0/1:26,2:26:34.39:101,0,34	0/1:21,0:20:6.92:7,0,83	0/1:24,0:23:33.73:71,0,34	0/0:24,0:24:72.15:0,72,816	0/0:23,0:23:44.76:0,45,590	0/0:24,0:24:51.98:0,52,636	0/1:21,1:22:14.32:131,0,14	0/1:11,0:11:12.40:12,0,21	0/1:18,1:17:15.61:64,0,16	1/1:17,0:17:7.88:81,8,0	0/1:24,1:20:32.92:33,0,166	0/1:20,0:17:25.62:26,0,67	0/1:12,0:11:5.98:30,0,6	0/0:14,0:14:40.23:0,40,439	0/0:18,0:17:45.07:0,45,512	0/0:13,0:13:22.19:0,22,347	0/0:21,0:21:56.96:0,57,669	0/1:16,0:16:28.35:28,0,37	0/1:26,0:26:57.92:86,0,58	1/1:14,0:12:6.68:69,7,0
chr10	14313128	.	AG	A	12584.80	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=12.628;DP=608;FS=2.130;HRun=1;HaplotypeScore=62.3309;InbreedingCoeff=0.9991;MQ=79.63;MQ0=0;MQRankSum=-2.515;QD=37.68;ReadPosRankSum=-0.367;VQSLOD=5.1296;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,132,2059	1/1:0,9:9:27.09:377,27,0	0/0:18,0:18:32.14:0,32,532	0/0:15,0:15:27.05:0,27,403	1/1:0,21:21:60.11:813,60,0	0/0:26,0:26:75.26:0,75,1194	0/0:18,0:18:51.16:0,51,790	1/1:0,30:30:90.28:1224,90,0	1/1:0,16:16:45.15:627,45,0	1/1:0,26:26:72.10:972,72,0	1/1:0,22:22:63.21:880,63,0	0/0:28,0:28:84.27:0,84,1317	0/0:26,0:26:72.25:0,72,1145	0/0:26,0:26:75.26:0,75,1197	1/1:0,27:27:69.23:962,69,0	1/1:0,14:14:36.12:502,36,0	1/1:0,29:29:69.23:964,69,0	1/1:0,16:16:42.14:587,42,0	1/1:0,30:29:87.23:1135,87,0	1/1:0,20:20:54.11:731,54,0	1/1:0,27:27:75.21:1026,75,0	0/0:14,0:14:42.13:0,42,648	0/0:13,0:13:39.13:0,39,620	0/0:23,0:23:69.20:0,69,1055	0/0:21,0:21:63.19:0,63,978	1/1:0,19:19:54.17:738,54,0	1/1:0,21:21:54.18:753,54,0	1/1:0,7:7:21.07:293,21,0
chr10	14314165	.	C	CACAT	2236.54	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-3.204;DP=869;FS=4.240;HRun=0;HaplotypeScore=143.2070;InbreedingCoeff=0.9169;MQ=58.89;MQ0=0;MQRankSum=0.445;QD=30.64;ReadPosRankSum=-0.346;VQSLOD=2.9885;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:66.14:0,66,988	0/0:14,0:14:30.10:0,30,494	0/0:39,0:27:29.46:0,29,439	0/0:43,0:35:51.33:0,51,791	0/0:35,0:35:78.25:0,78,1272	1/1:13,27:40:60.21:1470,60,0	1/1:10,21:33:36.12:888,36,0	0/0:52,0:52:86.36:0,86,1296	0/0:23,0:23:56.92:0,57,923	0/0:47,0:47:99:0,111,1752	0/0:27,0:27:69.24:0,69,1148	0/0:35,0:35:66.19:0,66,1048	0/0:35,0:35:69.20:0,69,1091	0/0:24,0:24:45.15:0,45,749	0/0:36,0:36:81.25:0,81,1290	0/0:27,0:27:72.25:0,72,1194	0/0:21,0:21:45.13:0,45,715	0/0:21,0:21:4.31:0,4,560	0/0:14,0:14:33.02:0,33,465	0/0:34,0:34:78.23:0,78,1237	0/0:37,0:37:62.80:0,63,1044	0/0:27,0:27:63.22:0,63,1041	0/0:18,0:18:51.17:0,51,849	0/0:33,0:33:69.20:0,69,1071	0/0:30,0:30:51.16:0,51,821	0/0:33,0:34:78.20:0,78,1239	0/0:40,0:40:99:0,99,1641	0/0:12,0:12:12.04:0,12,200
chr10	14314227	.	CAT	C	593.75	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=7.093;DP=776;FS=32.051;HRun=0;HaplotypeScore=176.0007;InbreedingCoeff=0.5979;MQ=50.56;MQ0=19;MQRankSum=2.181;QD=6.99;ReadPosRankSum=-2.003;VQSLOD=1.2195;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:47:56.96:0,57,983	0/0:12,0:12:18.42:0,18,154	0/0:24,0:6:14.99:0,15,150	0/0:24,0:10:26.98:0,27,259	0/0:35,0:34:47.59:0,48,385	1/1:26,6:31:1.46:344,1,0	1/1:34,1:33:45.93:356,46,0	0/0:40,0:36:87.30:0,87,730	0/0:29,0:28:29.31:0,29,276	0/0:46,0:43:51.83:0,52,633	0/0:28,0:28:35.93:0,36,295	0/0:32,0:32:59.50:0,59,917	0/0:18,0:18:16.82:0,17,412	0/1:18,0:18:0.56:1,0,352	0/0:43,0:43:34.43:0,34,278	0/0:28,0:27:34.16:0,34,279	0/0:21,0:20:18.92:0,19,204	0/0:15,0:13:24.64:0,25,150	0/0:16,0:16:38.26:0,38,295	0/0:26,0:26:32.62:0,33,267	0/0:32,0:31:44.52:0,45,363	0/0:22,0:22:12.90:0,13,586	0/0:17,0:17:25.87:0,26,341	0/0:36,0:35:27.19:0,27,917	0/0:15,0:14:0.55:0,1,293	0/0:34,0:33:75.36:0,75,594	0/0:38,0:38:40.35:0,40,385	0/0:12,0:12:4.27:0,4,90
chr10	14314229	.	TACACACACAC	T	3536.11	PASS	AB=0.722;AC=25;AF=0.481;AN=52;BaseQRankSum=5.005;DP=775;FS=3.325;HRun=0;HaplotypeScore=253.4579;InbreedingCoeff=0.5364;MQ=50.54;MQ0=19;MQRankSum=-3.724;QD=7.75;ReadPosRankSum=-3.211;VQSLOD=2.2271;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:47:85.06:0,85,3369	1/1:5,5:12:14.11:262,14,0	./.	./.	0/1:22,13:35:0.27:1,0,0	0/0:34,0:33:42.56:0,43,839	0/0:36,0:34:28.84:0,29,423	0/1:32,6:34:19.93:224,0,20	0/1:17,12:28:7.33:121,0,7	1/1:29,17:44:50.50:859,51,0	0/1:16,10:26:0:0,0,1	0/0:31,0:33:72.25:0,72,2541	0/0:18,0:19:29.93:0,30,952	0/0:18,0:19:39.13:0,39,1228	1/1:17,27:44:5.02:52,5,0	1/1:14,13:28:6.02:176,6,0	1/1:18,2:20:8.99:211,9,0	1/1:11,5:14:4.51:176,5,0	1/1:9,4:13:9:200,9,0	0/1:13,13:26:0.27:0,0,0	1/1:32,0:31:3.83:23,4,0	0/0:20,0:20:36.12:0,36,1322	0/0:16,0:17:17.78:0,18,633	0/0:35,0:35:66.22:0,66,2493	0/0:12,0:14:24.08:0,24,782	0/1:23,14:36:89.06:555,0,89	1/1:17,17:37:17.28:493,17,0	0/1:6,6:13:5.89:183,0,6
chr10	14314272	.	ACG	A	847.10	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=3.443;DP=722;FS=11.028;HRun=0;HaplotypeScore=180.1955;InbreedingCoeff=0.8994;MQ=63.49;MQ0=16;MQRankSum=-1.880;QD=13.89;ReadPosRankSum=1.268;VQSLOD=3.0896;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:47:99:0,102,1214	0/0:12,0:12:11.97:0,12,156	0/0:36,0:22:56.19:0,56,607	0/0:39,0:23:44.98:0,45,512	0/0:22,0:21:14.33:0,14,106	1/1:33,4:37:31.96:529,32,0	1/1:22,2:24:56.20:439,56,0	0/0:29,0:29:80.44:0,80,652	0/0:24,0:23:34.70:0,35,289	0/0:34,0:33:61.54:0,62,614	0/0:19,0:19:23.72:0,24,179	0/0:40,0:40:99:0,108,1326	0/0:21,0:21:48.05:0,48,554	0/0:16,0:16:4.86:0,5,412	0/0:36,0:36:35.79:0,36,290	0/0:25,0:24:26.21:0,26,201	0/0:20,0:19:36.30:0,36,263	0/0:18,0:17:41.53:0,42,256	0/0:12,0:10:21.19:0,21,138	0/0:21,0:21:26.17:0,26,181	0/0:24,0:24:37.17:0,37,308	0/0:17,0:17:28.51:0,29,515	0/0:13,0:13:14:0,14,260	0/0:33,0:32:78.02:0,78,1128	0/0:18,0:17:24.16:0,24,430	0/0:36,0:36:65.66:0,66,672	0/0:34,0:34:26.89:0,27,265	0/0:13,0:13:25.17:0,25,183
chr10	14317218	.	AC	A	7515.99	PASS	AB=0.849;AC=39;AF=0.696;AN=56;BaseQRankSum=6.158;DP=602;FS=2.811;HRun=10;HaplotypeScore=72.6818;InbreedingCoeff=0.5733;MQ=73.93;MQ0=0;MQRankSum=-3.651;QD=15.72;ReadPosRankSum=5.323;VQSLOD=5.3741;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:48.11:0,48,522	1/1:2,8:10:20.99:182,21,0	0/0:12,0:13:16.29:0,16,168	0/1:12,1:13:5.53:6,0,133	1/1:5,16:21:44.88:380,45,0	1/1:3,0:14:26.48:78,26,0	1/1:2,0:33:59.07:173,59,0	1/1:5,16:22:46.97:390,47,0	1/1:7,18:26:62.01:526,62,0	1/1:7,12:19:29.97:260,30,0	1/1:4,10:14:20.97:182,21,0	0/0:24,3:27:8.02:0,8,506	0/0:15,1:16:16.02:0,16,380	0/1:23,2:26:23.89:24,0,428	1/1:2,32:34:83.53:729,84,0	1/1:2,23:25:65.99:573,66,0	1/1:2,31:33:83.95:725,84,0	1/1:4,26:30:77.98:677,78,0	1/1:6,16:23:53.89:448,54,0	1/1:3,14:17:38.97:338,39,0	1/1:8,23:34:35.91:505,36,0	0/1:18,2:20:16.05:16,0,271	0/0:14,2:16:0.99:0,1,222	0/0:25,1:26:8.70:0,9,529	0/1:7,1:8:5.02:5,0,162	0/1:4,9:13:3.20:204,0,3	1/1:1,30:31:89.98:781,90,0	1/1:0,12:12:35.99:313,36,0
chr10	14319886	.	GT	G	6147.52	PASS	AB=0.592;AC=33;AF=0.589;AN=56;BaseQRankSum=10.150;DP=702;FS=2.824;HRun=11;HaplotypeScore=118.0789;InbreedingCoeff=0.7479;MQ=69.43;MQ0=7;MQRankSum=-7.538;QD=16.31;ReadPosRankSum=1.982;VQSLOD=4.7004;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:50,3:56:99:0,101,1396	1/1:4,9:13:32.90:260,33,0	0/0:43,1:26:31.52:0,32,248	0/0:62,0:40:4.25:0,4,275	1/1:4,23:28:27.60:407,28,0	1/1:3,16:19:12.97:313,13,0	0/1:5,13:18:23.22:233,0,23	1/1:9,9:18:15.10:185,15,0	1/1:0,14:15:43.71:341,44,0	1/1:6,15:21:49.95:396,50,0	1/1:5,11:16:35.92:290,36,0	0/0:24,0:24:56.97:0,57,571	0/0:19,1:25:32.26:0,32,512	0/0:21,0:21:60.10:0,60,606	1/1:7,30:37:28.38:600,28,0	1/1:3,24:26:62.84:500,63,0	1/1:2,24:26:62.89:511,63,0	1/1:6,15:21:44.90:366,45,0	1/1:6,14:20:32.35:268,32,0	0/1:10,17:27:31.53:312,0,32	1/1:4,20:24:15.33:336,15,0	0/0:18,1:19:20.46:0,20,416	0/0:18,1:19:17.44:0,17,376	0/0:29,0:28:61.39:0,61,640	0/0:23,0:24:62.99:0,63,654	0/1:5,12:18:18.44:254,0,18	1/1:2,19:20:53.87:434,54,0	1/1:2,6:8:17.94:141,18,0
chr10	14319898	.	CTGGTT	C	7433.10	PASS	AB=0.960;AC=33;AF=0.589;AN=56;BaseQRankSum=10.108;DP=685;FS=4.594;HRun=0;HaplotypeScore=165.3131;InbreedingCoeff=0.9067;MQ=67.97;MQ0=11;MQRankSum=-10.325;QD=20.36;ReadPosRankSum=-0.344;VQSLOD=4.4254;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:90.30:0,90,2343	1/1:4,11:15:24.08:432,24,0	0/0:44,0:22:10.28:0,10,168	0/0:65,0:37:21.36:0,21,373	1/1:22,10:32:42.13:725,42,0	0/0:16,0:16:27.03:0,27,553	0/0:18,0:18:18.06:0,18,473	1/1:13,4:17:18.05:301,18,0	1/1:7,10:18:30.10:521,30,0	1/1:22,4:27:35.40:633,35,0	1/1:9,4:13:9.03:161,9,0	0/0:21,0:21:42.14:0,42,1132	0/0:27,0:27:51.18:0,51,1410	0/0:21,0:21:51.15:0,51,1251	1/1:13,22:35:66.22:1181,66,0	1/1:7,22:28:54.18:973,54,0	1/1:20,8:28:33.08:565,33,0	1/1:11,9:20:24.06:357,24,0	1/1:13,4:16:12.04:217,12,0	1/1:16,4:21:18.06:290,18,0	1/1:23,1:24:2.92:25,3,0	0/0:17,0:17:21.07:0,21,587	0/0:13,0:13:15.04:0,15,366	0/1:23,1:23:0.83:1,0,1303	0/0:25,0:25:39.13:0,39,1084	1/1:15,3:18:18.03:295,18,0	1/1:10,10:18:24.08:431,24,0	1/1:1,6:7:18.06:323,18,0
chr10	14321313	.	GT	G	1724.41	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.157;DP=740;FS=3.596;HRun=1;HaplotypeScore=72.0963;InbreedingCoeff=0.9999;MQ=80.33;MQ0=0;MQRankSum=-3.871;QD=36.69;ReadPosRankSum=0.718;VQSLOD=3.9916;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,132,2093	0/0:13,0:13:39.13:0,39,622	0/0:25,0:25:72.25:0,72,1144	0/0:19,0:18:33.96:0,34,595	0/0:22,0:22:66.23:0,66,1054	1/1:0,19:19:51.17:713,51,0	1/1:0,28:28:81.27:1133,81,0	0/0:32,0:32:93.30:0,93,1427	0/0:29,0:29:87.28:0,87,1368	0/0:29,0:29:87.29:0,87,1372	0/0:32,0:32:93.30:0,93,1462	0/0:34,0:34:99:0,102,1560	0/0:29,0:29:87.30:0,87,1391	0/0:25,0:25:75.24:0,75,1176	0/0:33,0:33:99:0,99,1559	0/0:27,0:27:81.28:0,81,1295	0/0:18,0:18:54.16:0,54,838	0/0:25,0:25:75.26:0,75,1199	0/0:25,0:25:75.23:0,75,1150	0/0:21,0:21:60.19:0,60,930	0/0:40,0:40:99:0,117,1863	0/0:21,0:21:63.21:0,63,1007	0/0:28,0:28:78.25:0,78,1223	0/0:31,0:31:93.32:0,93,1479	0/0:18,0:18:54.18:0,54,863	0/0:30,0:30:90.29:0,90,1416	0/0:24,0:24:72.23:0,72,1122	0/0:19,0:19:57.16:0,57,884
chr10	14323402	.	CT	C	4948.32	PASS	AB=0.917;AC=37;AF=0.661;AN=56;BaseQRankSum=5.201;DP=522;FS=2.850;HRun=13;HaplotypeScore=62.3076;InbreedingCoeff=0.8817;MQ=71.13;MQ0=2;MQRankSum=0.742;QD=14.14;ReadPosRankSum=2.408;VQSLOD=5.6996;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,1:30:41.18:0,41,556	1/1:0,8:8:23.86:175,24,0	0/0:19,0:11:14.90:0,15,102	0/1:10,1:8:12.90:13,0,40	1/1:6,17:24:23.44:321,23,0	1/1:5,19:24:18.55:299,19,0	1/1:0,10:10:20.88:153,21,0	1/1:13,12:26:21.63:261,22,0	1/1:2,14:16:41.74:306,42,0	1/1:7,23:30:59.60:437,60,0	1/1:2,11:13:32.80:240,33,0	0/0:16,0:16:36.05:0,36,345	0/0:16,0:16:36.03:0,36,339	0/0:22,0:22:19.47:0,19,439	1/1:5,17:24:45.66:318,46,0	1/1:4,12:16:32.78:240,33,0	1/1:7,17:25:43.06:296,43,0	1/1:2,27:29:74.56:547,75,0	1/1:5,11:17:8.63:215,9,0	1/1:3,13:16:21.92:226,22,0	1/1:3,7:10:20.87:153,21,0	0/0:13,0:13:33.04:0,33,317	0/0:17,0:17:51.08:0,51,493	0/0:13,0:13:36:0,36,335	0/0:24,2:26:35.18:0,35,503	1/1:3,21:24:54.88:413,55,0	1/1:5,17:23:43.78:312,44,0	1/1:2,2:4:2.95:22,3,0
chr10	14324094	.	CGTGT	C	510.93	PASS	AB=0.875;AC=7;AF=0.125;AN=56;BaseQRankSum=1.151;DP=579;FS=5.912;HRun=0;HaplotypeScore=98.2672;InbreedingCoeff=0.4501;MQ=62.69;MQ0=19;MQRankSum=0.851;QD=5.49;ReadPosRankSum=2.312;VQSLOD=1.6887;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:34:10.15:0,10,317	0/0:3,0:3:8.96:0,9,160	0/0:48,0:13:0:0,0,0	0/0:61,0:18:0:0,0,0	0/0:19,0:19:27:0,27,442	1/1:13,4:17:26.97:322,27,0	0/1:9,6:15:3.37:92,0,3	0/0:22,0:22:2.94:0,3,18	1/1:14,3:17:18:200,18,0	0/0:14,0:13:9:0,9,123	0/0:8,0:8:9.01:0,9,127	0/0:17,0:18:29.82:0,30,554	0/0:14,0:17:35.82:0,36,674	0/0:18,0:20:32.83:0,33,630	0/0:26,0:26:36.02:0,36,650	0/1:18,1:19:19.73:20,0,458	0/0:23,0:23:33.08:0,33,622	0/0:13,0:15:14:0,14,102	0/0:18,0:17:3.84:0,4,294	0/0:11,0:11:15.03:0,15,278	0/0:38,0:37:12.46:0,12,214	0/0:7,0:7:9.01:0,9,165	0/0:11,0:11:18.02:0,18,259	0/1:24,1:25:13.70:14,0,581	0/0:12,0:14:17.73:0,18,222	0/0:23,0:24:35.78:0,36,451	0/0:23,0:23:36.31:0,36,699	0/0:10,0:9:11.02:0,11,151
chr10	14324137	.	GTATGTATGTATATATGTACGTA	G	1692.31	PASS	AB=0.904;AC=10;AF=0.179;AN=56;BaseQRankSum=4.664;DP=517;FS=0.000;HRun=0;HaplotypeScore=229.0639;InbreedingCoeff=0.0692;MQ=48.22;MQ0=16;MQRankSum=-0.781;QD=11.36;ReadPosRankSum=-1.509;VQSLOD=2.3816;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:33:42.70:0,43,3123	0/0:3,0:3:6.01:0,6,65	0/0:30,0:9:3.01:0,3,107	0/0:43,0:9:3.01:0,3,115	0/0:12,0:12:14.87:0,15,136	0/0:18,0:18:25.83:0,26,170	0/0:15,0:15:8.55:0,9,43	1/1:21,0:21:9.02:109,9,0	0/0:17,0:17:11.69:0,12,84	0/1:8,4:12:20.37:235,0,20	0/0:7,0:7:5.93:0,6,49	0/0:23,0:23:51:0,51,2887	0/0:22,0:22:13.09:0,13,2393	0/0:24,0:24:37.01:0,37,2223	0/1:19,0:19:99:177,0,226	0/0:21,0:21:6.69:0,7,192	0/1:14,0:14:3.53:4,0,190	1/1:13,0:13:0.26:175,0,0	0/1:19,0:15:76.03:328,0,76	0/0:11,0:11:11.24:0,11,96	0/0:22,0:22:6.18:0,6,57	0/0:7,0:7:18.06:0,18,836	0/0:9,0:9:17.95:0,18,827	0/0:23,0:23:41.95:0,42,1577	0/0:18,0:19:47.19:0,47,2785	0/1:17,11:28:78.44:392,0,78	0/1:22,0:23:99:409,0,276	0/0:7,0:5:5.80:0,6,46
chr10	14324146	.	TATATATGTAC	T	655.15	PASS	AB=0.862;AC=6;AF=0.107;AN=56;BaseQRankSum=6.387;DP=471;FS=5.589;HRun=0;HaplotypeScore=131.2285;InbreedingCoeff=-0.1358;MQ=48.43;MQ0=18;MQRankSum=-2.560;QD=6.62;ReadPosRankSum=-0.616;VQSLOD=2.1245;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:31:72.23:0,72,2779	0/0:2,0:2:6.02:0,6,232	0/0:31,0:9:27.09:0,27,645	0/0:47,0:9:27.09:0,27,563	0/0:8,1:9:18.06:0,18,592	0/0:10,5:15:18.06:0,18,414	0/0:11,0:11:12.04:0,12,309	0/0:17,0:17:28.97:0,29,802	0/0:14,3:17:27.08:0,27,674	0/1:9,0:9:98.10:98,0,371	0/0:5,1:6:6:0,6,90	0/0:23,0:23:63.18:0,63,2658	0/0:22,0:22:60.11:0,60,2337	0/0:24,0:24:69.22:0,69,2606	0/1:13,6:19:64.60:65,0,852	0/0:13,8:21:24.06:0,24,725	0/0:11,0:11:27.05:0,27,658	0/1:8,3:11:53.66:54,0,474	0/1:12,2:12:99:156,0,483	0/0:7,0:7:15.05:0,15,472	0/0:18,0:18:24.51:0,25,595	0/0:6,0:6:15.05:0,15,663	0/0:8,0:8:18.06:0,18,728	0/0:18,0:18:45.14:0,45,1734	0/0:19,0:19:51.16:0,51,2126	0/1:22,0:22:99:176,0,655	0/1:16,8:24:99:231,0,952	0/0:7,0:5:9.03:0,9,318
chr10	14324432	.	G	GATATAT	6592.68	PASS	AB=1.000;AC=33;AF=0.660;AN=50;BaseQRankSum=-4.905;DP=274;FS=8.743;HRun=0;HaplotypeScore=57.6464;InbreedingCoeff=0.6811;MQ=73.43;MQ0=1;MQRankSum=-6.307;QD=38.78;ReadPosRankSum=-3.246;VQSLOD=2.5202;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:54.16:0,54,1100	./.	1/1:5,0:4:0.89:2,1,0	0/1:11,0:10:0.39:0,0,85	1/1:2,5:8:9.03:288,9,0	0/0:9,0:24:2.22:0,2,74	./.	1/1:29,14:49:92.35:2472,92,0	1/1:5,1:6:3.01:101,3,0	1/1:3,1:6:6.02:150,6,0	1/1:2,2:5:9.03:240,9,0	0/0:9,0:9:24.08:0,24,479	0/0:8,0:8:18.06:0,18,388	0/0:7,0:7:12.04:0,12,260	1/1:3,1:4:3.01:101,3,0	1/1:2,1:4:3.01:101,3,0	1/1:4,4:8:15.05:502,15,0	1/1:3,1:9:6.02:180,6,0	1/1:4,5:11:21.07:554,21,0	1/1:1,0:2:3.01:39,3,0	1/1:4,1:5:3.01:100,3,0	./.	0/0:8,0:8:12.04:0,12,223	0/0:3,0:3:9.03:0,9,192	0/0:20,0:20:48.16:0,48,1038	1/1:6,4:12:21.06:478,21,0	1/1:5,6:11:21.07:703,21,0	1/1:3,10:13:18.06:582,18,0
chr10	14325180	.	TTAATAA	T	2585.45	PASS	AB=0.727;AC=23;AF=0.500;AN=46;BaseQRankSum=-5.806;DP=235;FS=7.234;HRun=0;HaplotypeScore=50.1402;InbreedingCoeff=0.6185;MQ=62.90;MQ0=0;MQRankSum=-1.898;QD=17.01;ReadPosRankSum=-2.798;VQSLOD=0.9338;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:8:15.03:0,15,326	1/1:2,3:5:3.01:62,3,0	./.	0/0:6,0:4:2.90:0,3,16	1/1:4,2:6:5.98:57,6,0	0/0:3,0:12:20.58:0,21,127	0/0:3,0:6:7.13:0,7,40	1/1:19,13:31:39.01:512,39,0	1/1:2,3:5:3.01:62,3,0	0/0:8,0:12:14.33:0,14,120	0/0:2,0:3:2.60:0,3,10	0/0:2,0:2:3.01:0,3,79	0/0:1,0:4:6.02:0,6,157	0/0:3,0:3:3.01:0,3,41	1/1:1,2:3:6.02:124,6,0	./.	1/1:8,11:19:18.21:429,18,0	0/1:15,9:24:8.57:115,0,9	1/1:4,7:10:15.02:221,15,0	1/1:4,5:9:14.96:202,15,0	./.	./.	./.	0/0:1,0:2:3.01:0,3,79	0/0:3,0:11:15.05:0,15,394	1/1:2,3:5:9.03:163,9,0	1/1:3,4:7:9.03:186,9,0	1/1:3,23:26:30.10:620,30,0
chr10	14330026	.	CGT	C	173.06	PASS	AB=0.931;AC=12;AF=0.375;AN=32;BaseQRankSum=2.469;DP=491;FS=1.178;HRun=0;HaplotypeScore=82.8143;InbreedingCoeff=0.1306;MQ=58.19;MQ0=15;MQRankSum=-1.849;QD=1.06;ReadPosRankSum=1.273;VQSLOD=1.6738;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:14,0:12:2.61:3,0,190	./.	./.	./.	./.	0/0:14,0:15:0:0,0,0	0/0:21,0:20:2.91:0,3,42	./.	0/0:15,0:15:0:0,0,0	1/1:18,0:18:2.84:14,3,0	./.	0/1:25,0:25:25.28:25,0,224	0/0:13,0:11:9:0,9,93	0/0:17,0:17:8.68:0,9,202	1/1:27,0:27:8.52:42,9,0	1/1:24,0:24:2.84:14,3,0	./.	./.	./.	./.	0/0:62,0:59:0:0,0,0	0/0:9,0:9:3.01:0,3,43	0/1:5,2:7:25.61:26,0,36	0/1:33,2:33:99:141,0,161	0/0:10,0:10:6.02:0,6,86	./.	1/1:14,0:14:2.84:14,3,0	./.
chr10	14330063	.	GTGTGTGTGTGTGTGTGTGCGCACGCGCGC	G	7351.78	PASS	AB=1.000;AC=26;AF=0.481;AN=54;BaseQRankSum=7.116;DP=482;FS=5.374;HRun=0;HaplotypeScore=241.6218;InbreedingCoeff=0.6112;MQ=41.63;MQ0=28;MQRankSum=-11.320;QD=30.89;ReadPosRankSum=-4.249;VQSLOD=2.8758;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:20:39.13:0,39,3476	0/1:3,0:3:0:0,0,0	0/0:11,0:4:12.04:0,12,585	0/0:9,0:2:6.02:0,6,282	1/1:8,0:6:1.82:5,2,0	0/0:18,0:16:10.29:0,10,784	0/0:26,0:23:33.10:0,33,1971	0/1:10,0:9:14.94:317,0,15	1/1:3,13:16:3.01:203,3,0	1/1:1,15:16:14.16:675,14,0	./.	0/0:31,0:28:72.25:0,72,6618	0/0:20,0:18:42.67:0,43,3619	0/0:26,0:23:48.16:0,48,4538	1/1:3,17:20:12.04:860,12,0	1/1:5,13:18:3.01:234,3,0	1/1:24,0:24:39.13:1421,39,0	0/1:18,0:16:71.39:457,0,71	1/1:11,0:9:22.56:736,23,0	1/1:7,0:7:2.68:110,3,0	1/1:48,0:44:21.82:176,22,0	0/0:10,0:10:15.05:0,15,998	0/0:5,0:5:12.04:0,12,1057	0/0:45,0:44:93.32:0,93,8924	0/0:16,0:15:33.11:0,33,2807	1/1:13,0:11:30.10:1102,30,0	1/1:19,0:19:23.49:977,23,0	0/1:7,0:4:26.62:79,0,27
chr10	14330081	.	GCGCACGCGCGC	G	6714.64	PASS	AC=28;AF=0.519;AN=54;BaseQRankSum=8.855;DP=431;FS=13.683;HRun=0;HaplotypeScore=131.5082;InbreedingCoeff=0.8292;MQ=59.73;MQ0=14;MQRankSum=-10.863;QD=35.72;ReadPosRankSum=-0.416;VQSLOD=3.8893;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:21:48.15:0,48,2381	0/0:0,3:3:0:0,0,0	0/0:15,0:10:30.10:0,30,1390	0/0:15,0:11:30.10:0,30,1180	1/1:0,6:6:1.82:5,2,0	0/0:16,0:15:18.06:0,18,740	0/0:22,0:19:26.84:0,27,1124	1/1:0,8:7:21.03:483,21,0	1/1:13,0:13:3.01:58,3,0	1/1:15,0:15:14.57:531,15,0	./.	0/0:26,0:25:69.24:0,69,3498	0/0:18,0:18:42.21:0,42,2295	0/0:26,0:23:51.11:0,51,2656	1/1:17,0:17:11.87:282,12,0	1/1:13,0:13:3.01:89,3,0	1/1:0,24:24:42.14:1494,42,0	1/1:2,8:9:12:351,12,0	1/1:0,10:10:27.09:844,27,0	1/1:0,6:6:2.95:110,3,0	1/1:3,29:31:11.20:39,11,0	0/0:10,0:10:18.06:0,18,860	0/0:6,0:6:15.05:0,15,785	0/0:45,0:44:99:0,108,5673	0/0:14,0:14:33.11:0,33,1864	1/1:2,12:12:33.11:1150,33,0	1/1:2,14:16:33.11:1167,33,0	1/1:2,1:1:3.01:111,3,0
chr10	14331426	.	CAA	C	19450.54	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=12.158;DP=722;FS=7.292;HRun=2;HaplotypeScore=91.7477;InbreedingCoeff=0.9999;MQ=83.44;MQ0=0;MQRankSum=-4.054;QD=44.31;ReadPosRankSum=0.991;VQSLOD=4.2859;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,99,1968	1/1:0,11:11:33.11:538,33,0	0/0:18,0:18:54.10:0,54,971	0/0:27,0:27:78.13:0,78,1509	1/1:0,34:34:81.28:1315,81,0	0/0:19,0:19:57.20:0,57,1147	0/0:19,0:19:57.20:0,57,1148	1/1:0,46:46:99:2174,135,0	1/1:0,32:32:81.28:1321,81,0	1/1:0,31:31:93.32:1497,93,0	1/1:0,15:15:33.11:519,33,0	0/0:22,0:22:66.21:0,66,1303	0/0:27,0:27:81.28:0,81,1637	0/0:19,0:19:57.20:0,57,1158	1/1:0,35:35:99:1614,99,0	1/1:0,27:27:78.27:1272,78,0	1/1:0,20:20:57.19:929,57,0	1/1:0,34:34:93.32:1517,93,0	1/1:0,22:22:66.23:1073,66,0	1/1:0,30:30:81.28:1319,81,0	1/1:0,30:30:69.24:1125,69,0	0/0:27,0:27:81.26:0,81,1600	0/0:24,0:24:72.25:0,72,1451	0/0:27,0:27:81.23:0,81,1605	0/0:20,0:20:60.21:0,60,1193	1/1:0,28:28:84.28:1332,84,0	1/1:0,33:33:84.29:1369,84,0	1/1:0,11:11:33.11:538,33,0
chr10	14335127	.	AGTGT	A	9072.71	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=10.439;DP=724;FS=10.257;HRun=0;HaplotypeScore=142.7201;InbreedingCoeff=0.9350;MQ=66.80;MQ0=16;MQRankSum=-6.679;QD=24.00;ReadPosRankSum=1.824;VQSLOD=4.1044;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:48:84.01:0,84,1881	1/1:0,5:5:12.04:194,12,0	0/0:58,0:18:15.05:0,15,330	0/0:63,0:26:16.94:0,17,228	1/1:2,5:8:18.05:266,18,0	1/1:4,6:10:21.07:340,21,0	1/1:29,13:43:57.04:850,57,0	1/1:15,12:28:5.83:556,6,0	1/1:14,17:32:50.58:889,51,0	1/1:13,3:16:15.05:230,15,0	1/1:2,2:5:9.02:125,9,0	0/0:35,1:38:31.35:0,31,1560	0/0:26,0:27:68.95:0,69,1485	0/0:28,0:28:48.16:0,48,1125	1/1:9,10:21:36.11:527,36,0	1/1:10,20:34:81.12:1228,81,0	1/1:17,15:32:51.15:777,51,0	1/1:8,15:24:51.17:835,51,0	1/1:9,3:12:9.03:148,9,0	1/1:4,5:9:15.05:226,15,0	1/1:35,11:47:36.55:591,37,0	0/0:11,0:11:18.06:0,18,436	0/0:7,0:9:20.81:0,21,441	0/0:44,0:49:99:0,113,2410	0/0:11,0:14:35.59:0,36,740	1/1:6,11:18:36.12:564,36,0	1/1:7,17:24:39.13:628,39,0	1/1:6,3:9:6.02:99,6,0
chr10	14335153	.	TTG	T	1367.60	PASS	AB=0.899;AC=15;AF=0.268;AN=56;BaseQRankSum=9.293;DP=721;FS=0.000;HRun=0;HaplotypeScore=150.3295;InbreedingCoeff=-0.3822;MQ=55.82;MQ0=24;MQRankSum=-6.048;QD=4.92;ReadPosRankSum=1.542;VQSLOD=2.7359;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,132,2385	0/1:6,0:6:39.53:40,0,59	0/0:71,0:16:36.06:0,36,665	0/0:81,0:25:40.33:0,40,776	0/1:10,0:10:14.22:14,0,63	0/0:6,5:11:1.46:0,1,111	0/1:23,2:25:99:219,0,241	0/1:21,2:22:99:308,0,110	0/1:21,9:29:75.37:75,0,219	0/1:14,1:13:22.48:245,0,22	0/1:4,0:4:18.25:19,0,18	0/0:37,0:37:99:0,108,1841	0/0:25,0:25:61.10:0,61,1234	0/0:27,1:28:81.27:0,81,1450	0/1:12,9:21:76.29:76,0,88	0/1:29,12:41:41.67:42,0,417	0/1:17,11:28:27.85:28,0,218	0/1:17,6:23:99:130,0,294	0/1:11,0:11:68.92:69,0,279	0/1:6,0:6:48.97:60,0,49	0/0:22,24:46:28.99:0,29,214	0/0:13,0:13:37.37:0,37,653	0/0:12,0:12:30:0,30,486	0/0:49,0:49:99:0,138,2407	0/0:19,0:19:49.33:0,49,751	0/1:16,0:16:99:138,0,143	0/1:18,1:19:60.63:61,0,160	0/0:3,0:3:6.01:0,6,59
chr10	14335162	.	GTTGGTGTGTA	G	7495.08	PASS	AC=34;AF=0.630;AN=54;BaseQRankSum=5.180;DP=725;FS=12.014;HRun=0;HaplotypeScore=226.8867;InbreedingCoeff=0.9505;MQ=57.02;MQ0=14;MQRankSum=-7.908;QD=21.54;ReadPosRankSum=-2.127;VQSLOD=1.9431;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,129,4006	1/1:6,1:7:11.97:195,12,0	0/0:58,0:23:42.46:0,42,666	0/0:83,0:38:78.88:0,79,1247	1/1:3,8:11:14.73:224,15,0	1/1:11,0:11:2.94:18,3,0	1/1:24,3:27:41.93:715,42,0	1/1:17,0:16:30.08:607,30,0	1/1:24,7:31:59.61:884,60,0	1/1:5,9:12:23.80:481,24,0	1/1:8,0:8:14.98:144,15,0	0/0:38,0:38:87.23:0,87,2648	0/0:24,0:24:57.12:0,57,1778	0/0:25,0:25:60.19:0,60,2210	1/1:20,6:26:10.50:647,11,0	1/1:36,7:43:47.68:809,48,0	1/1:21,5:26:23.84:495,24,0	1/1:20,3:23:24.02:492,24,0	1/1:17,0:17:26.98:323,27,0	1/1:4,2:6:12.03:269,12,0	1/1:49,0:49:34.93:246,35,0	0/0:15,0:15:36.02:0,36,1044	0/0:11,0:11:21.07:0,21,903	0/0:48,0:48:99:0,108,3657	0/0:18,0:18:42.07:0,42,1239	1/1:14,2:16:21.02:425,21,0	1/1:12,4:16:26.99:521,27,0	./.
chr10	14337746	.	A	AT	6247.49	PASS	AB=1.000;AC=33;AF=0.611;AN=54;BaseQRankSum=-3.330;DP=413;FS=4.626;HRun=10;HaplotypeScore=46.4265;InbreedingCoeff=0.9261;MQ=64.22;MQ0=3;MQRankSum=-1.580;QD=21.62;ReadPosRankSum=0.546;VQSLOD=5.6946;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:71.67:0,72,569	1/1:2,6:8:15.04:159,15,0	0/0:10,0:8:11.97:0,12,96	0/0:6,0:5:11.91:0,12,90	1/1:1,17:18:47.99:494,48,0	./.	0/1:11,0:11:0:0,0,0	1/1:9,27:36:78.20:831,78,0	1/1:0,9:9:21.05:224,21,0	1/1:3,15:17:45.03:457,45,0	1/1:2,8:10:17.96:177,18,0	0/0:13,0:13:26.95:0,27,219	0/0:12,0:12:29.96:0,30,246	0/0:13,0:12:32.96:0,33,271	1/1:2,6:8:12.03:128,12,0	1/1:1,10:11:30.08:320,30,0	1/1:2,23:25:47.55:711,48,0	1/1:6,23:28:18.44:552,18,0	1/1:7,11:18:33.08:352,33,0	1/1:1,12:13:36.09:384,36,0	1/1:2,3:5:6.02:64,6,0	0/0:5,0:5:8.96:0,9,70	0/0:8,0:8:20.97:0,21,170	0/0:7,0:7:17.97:0,18,145	0/0:14,0:14:35.96:0,36,296	1/1:7,28:34:59.55:830,60,0	1/1:4,13:16:18.05:192,18,0	1/1:6,11:17:36.06:373,36,0
chr10	14337899	.	CG	C	7769.25	PASS	AB=1.000;AC=41;AF=0.788;AN=52;BaseQRankSum=11.060;DP=398;FS=1.727;HRun=3;HaplotypeScore=83.3985;InbreedingCoeff=0.8821;MQ=40.71;MQ0=63;MQRankSum=-1.999;QD=25.90;ReadPosRankSum=0.928;VQSLOD=3.9948;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:34:90.30:0,90,1293	1/1:0,7:6:18.06:223,18,0	0/1:3,0:2:4.42:4,0,22	0/0:4,0:4:11.68:0,12,119	1/1:2,12:12:27.08:334,27,0	./.	./.	1/1:6,7:7:21.06:248,21,0	1/1:1,12:12:36.11:446,36,0	1/1:2,19:18:51.16:632,51,0	1/1:0,12:10:24.08:297,24,0	0/0:21,0:21:54.10:0,54,726	1/1:0,6:6:15.05:186,15,0	1/1:0,7:6:15.05:186,15,0	1/1:1,5:5:15.05:186,15,0	1/1:1,13:14:36.11:445,36,0	1/1:8,22:21:48.15:595,48,0	1/1:13,13:13:33.10:407,33,0	1/1:3,11:12:33.10:409,33,0	1/1:0,5:4:12.04:149,12,0	1/1:6,7:7:21.07:260,21,0	0/0:9,0:7:12.04:0,12,173	1/1:1,10:9:27.08:334,27,0	1/1:7,15:15:39.12:483,39,0	0/0:19,0:18:54.07:0,54,709	1/1:2,23:21:63.19:768,63,0	1/1:0,22:22:60.19:743,60,0	1/1:4,12:12:36.10:435,36,0
chr10	14338276	.	GT	G	15315.07	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=11.017;DP=698;FS=0.287;HRun=2;HaplotypeScore=74.8416;InbreedingCoeff=0.9993;MQ=79.79;MQ0=0;MQRankSum=-2.205;QD=35.05;ReadPosRankSum=1.603;VQSLOD=5.2746;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,102,1506	1/1:0,11:11:30.10:389,30,0	0/0:19,0:19:57.16:0,57,799	0/0:16,0:16:45.15:0,45,672	1/1:0,19:19:32.85:421,33,0	1/1:0,17:17:48.16:623,48,0	1/1:0,38:38:99:1281,99,0	1/1:0,20:20:60.13:743,60,0	1/1:0,32:32:93.30:1207,93,0	1/1:1,20:21:60.19:777,60,0	1/1:0,9:9:24.07:297,24,0	0/0:43,0:43:99:0,129,1933	0/0:36,0:36:99:0,99,1461	0/0:29,0:29:84.28:0,84,1250	1/1:1,25:26:69.22:896,69,0	1/1:0,25:25:60.20:779,60,0	1/1:0,27:27:81.26:1051,81,0	1/1:0,35:35:96.31:1246,96,0	1/1:0,20:20:60.17:748,60,0	1/1:0,10:10:30.10:379,30,0	1/1:2,52:54:99:1829,141,0	0/0:24,0:24:72.23:0,72,1043	0/0:14,0:14:39.13:0,39,572	0/0:28,0:28:84.26:0,84,1217	0/0:17,0:17:51.16:0,51,727	1/1:1,39:40:99:1486,117,0	1/1:0,24:24:63.20:813,63,0	1/1:0,9:9:27.09:350,27,0
chr10	14338635	.	TCTC	T	5223.69	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=15.296;DP=607;FS=8.620;HRun=0;HaplotypeScore=238.3659;InbreedingCoeff=0.9432;MQ=62.90;MQ0=4;MQRankSum=-13.668;QD=16.74;ReadPosRankSum=-2.238;VQSLOD=2.7000;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,1:42:99:0,117,2631	1/1:8,1:9:7.01:58,7,0	0/0:20,0:12:32.40:0,32,656	0/0:32,0:23:29.30:0,29,1012	1/1:17,4:21:6.11:16,6,0	0/0:17,0:17:26.93:0,27,335	0/0:42,0:42:59.36:0,59,1136	1/1:14,0:13:32.98:333,33,0	1/1:25,5:30:35.48:266,35,0	1/1:21,4:25:74.88:875,75,0	1/1:9,2:11:8.99:57,9,0	0/0:24,0:24:72.22:0,72,1581	0/0:18,0:18:51.17:0,51,1155	0/0:27,0:27:75.24:0,75,1678	1/1:22,3:25:19.61:145,20,0	1/1:15,7:22:15.26:75,15,0	1/1:16,4:19:36.52:388,37,0	1/1:11,4:15:26.83:293,27,0	1/1:13,0:13:38.33:360,38,0	1/1:12,4:16:12.07:72,12,0	1/1:16,0:16:5.97:47,6,0	0/0:9,0:9:27.09:0,27,582	0/0:10,0:10:30.08:0,30,625	0/0:37,0:37:99:0,111,2397	0/0:16,0:16:42.11:0,42,888	1/1:26,10:36:99:1394,108,0	1/1:22,6:27:53.86:561,54,0	1/1:7,3:10:24:284,24,0
chr10	14338637	.	TC	T	5719.23	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=15.766;DP=592;FS=8.919;HRun=1;HaplotypeScore=220.2107;InbreedingCoeff=0.9163;MQ=61.83;MQ0=6;MQRankSum=-13.705;QD=18.75;ReadPosRankSum=-2.183;VQSLOD=3.1087;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,116,1779	1/1:1,7:8:4.55:45,5,0	0/0:21,0:12:34.65:0,35,471	0/0:31,0:22:28.85:0,29,783	1/1:5,16:21:6.21:16,6,0	0/0:16,0:16:20.85:0,21,217	0/0:42,0:42:56.14:0,56,778	1/1:0,11:10:27.09:374,27,0	1/1:5,25:30:34.86:397,35,0	1/1:4,22:26:78.15:1001,78,0	1/1:3,8:10:6.11:50,6,0	0/0:23,0:23:66.21:0,66,1023	0/0:19,0:19:51.14:0,51,760	0/0:27,0:26:72.24:0,72,1130	1/1:3,21:24:16.69:179,17,0	1/1:7,15:22:15.29:106,15,0	1/1:4,16:19:33.64:387,34,0	1/1:4,11:15:22.88:302,23,0	1/1:1,11:11:32.36:393,32,0	1/1:4,12:16:9.23:57,9,0	1/1:2,13:15:2.99:42,3,0	0/0:9,0:9:27.06:0,27,383	0/0:9,0:9:27.09:0,27,429	0/0:34,0:34:99:0,102,1571	0/0:14,0:14:36.11:0,36,551	1/1:10,26:36:99:1404,108,0	1/1:6,21:27:51.14:649,51,0	1/1:4,7:11:26.75:318,27,0
chr10	14338650	.	CGTGCGTGTGT	C	1067.25	PASS	AB=1.000;AC=22;AF=0.393;AN=56;BaseQRankSum=3.063;DP=638;FS=3.284;HRun=0;HaplotypeScore=342.8788;InbreedingCoeff=0.0123;MQ=49.13;MQ0=6;MQRankSum=-7.996;QD=2.72;ReadPosRankSum=-6.315;VQSLOD=0.7586;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:89.51:0,90,1614	0/1:9,0:9:10.03:16,0,10	0/0:17,0:8:11.13:0,11,126	0/1:24,0:15:28.85:29,0,77	0/0:30,0:30:0.95:0,1,51	1/1:3,13:17:15.05:412,15,0	1/1:7,31:40:9.91:183,10,0	0/1:20,0:18:66.61:67,0,136	0/1:32,0:32:90:90,0,234	0/1:31,0:31:99:99,0,710	0/1:16,0:15:3.47:3,0,23	0/0:22,0:22:38.68:0,39,794	0/0:16,0:16:33.08:0,33,449	0/0:31,0:30:59.35:0,59,1746	1/1:25,0:25:11.68:29,12,0	0/1:20,0:20:29.48:29,0,42	0/1:19,0:18:57.03:57,0,173	0/1:17,0:17:99:111,0,151	0/0:19,0:18:1.92:0,2,574	1/1:16,0:16:7.10:18,7,0	1/1:19,0:19:1.41:4,1,0	0/0:13,0:13:23.96:0,24,409	0/0:10,0:10:21.28:0,21,512	0/0:35,0:35:90.12:0,90,2950	0/0:14,0:14:32.99:0,33,979	0/1:44,0:44:30.91:31,0,1232	0/1:32,0:31:49.88:50,0,348	0/1:11,0:11:9.32:9,0,323
chr10	14338654	.	CGT	C	261.26	PASS	AB=0.954;AC=19;AF=0.365;AN=52;BaseQRankSum=2.784;DP=656;FS=23.614;HRun=0;HaplotypeScore=291.1489;InbreedingCoeff=0.1255;MQ=45.97;MQ0=7;MQRankSum=-6.359;QD=0.77;ReadPosRankSum=-2.235;VQSLOD=1.0334;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:38.91:0,39,479	0/1:8,0:8:5.22:5,0,5	./.	./.	0/0:30,0:30:0.43:0,0,57	1/1:17,0:17:14.37:90,14,0	1/1:36,0:36:2.72:52,3,0	0/0:22,0:20:18.08:0,18,72	0/1:35,0:35:22.69:23,0,44	0/0:28,0:28:12.71:0,13,138	0/1:18,0:17:2.22:2,0,38	0/0:25,0:25:16.93:0,17,188	0/0:19,0:19:9.49:0,9,104	0/1:28,0:27:0.28:0,0,289	1/1:25,0:25:6.45:32,6,0	1/1:20,0:20:13.55:38,14,0	0/0:20,0:19:11.05:0,11,62	0/0:18,0:18:8.20:0,8,43	0/0:26,0:25:24.05:0,24,104	0/1:16,0:16:2.92:7,0,3	0/1:21,0:20:3.35:3,0,7	0/1:10,2:12:33.52:34,0,56	0/1:9,2:11:33.44:57,0,33	0/0:34,3:37:33.14:0,33,850	0/1:11,4:15:45.04:45,0,164	0/1:46,0:46:8.39:8,0,99	0/1:31,0:31:18.81:19,0,27	0/0:12,0:12:8.86:0,9,36
chr10	14338663	.	G	GCACA	4174.35	PASS	AB=0.985;AC=16;AF=0.286;AN=56;BaseQRankSum=10.493;DP=666;FS=2.672;HRun=0;HaplotypeScore=295.2011;InbreedingCoeff=0.0227;MQ=45.54;MQ0=8;MQRankSum=-11.042;QD=12.31;ReadPosRankSum=3.207;VQSLOD=3.0371;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,102,2063	0/0:8,0:8:3.70:0,4,64	0/0:16,0:4:12.04:0,12,249	0/0:23,0:11:26.44:0,26,406	1/1:30,0:30:1.09:5,1,0	0/0:20,0:20:21.06:0,21,271	0/0:38,0:38:20.41:0,20,242	0/1:22,0:18:99:188,0,224	0/1:32,1:33:99:218,0,276	0/1:27,0:27:99:628,0,381	0/1:17,0:16:0.02:0,0,1	0/0:24,0:24:57.67:0,58,1173	0/0:20,0:20:45.15:0,45,905	0/0:32,0:31:66.70:0,67,1361	0/1:21,2:23:0.01:0,0,0	1/1:18,1:19:6.49:102,6,0	0/1:21,0:21:99:313,0,123	0/1:18,0:18:99:283,0,255	0/1:27,0:26:99:245,0,288	0/1:16,0:15:0.03:0,0,0	0/0:19,0:18:0.21:0,0,1	0/0:11,0:11:21.07:0,21,401	0/0:14,0:14:36.05:0,36,656	0/0:42,0:42:99:0,111,2275	0/0:16,0:16:32.75:0,33,603	0/1:45,1:46:99:1587,0,540	0/1:27,0:27:99:462,0,133	0/1:12,0:12:99:142,0,329
chr10	14338665	.	G	GCACA	5628.12	PASS	AB=0.770;AC=17;AF=0.304;AN=56;BaseQRankSum=10.219;DP=713;FS=0.418;HRun=0;HaplotypeScore=316.0726;InbreedingCoeff=0.0447;MQ=43.38;MQ0=8;MQRankSum=-10.427;QD=14.32;ReadPosRankSum=2.349;VQSLOD=3.4838;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,102,2051	0/0:4,4:8:3.70:0,4,38	0/0:16,0:4:12.04:0,12,225	0/0:20,0:8:17.90:0,18,288	1/1:17,14:32:1.09:5,1,0	0/0:21,0:21:21.07:0,21,314	0/0:37,0:37:21.03:0,21,305	0/1:28,3:27:99:692,0,129	0/1:24,12:36:99:181,0,168	0/1:21,9:30:99:967,0,193	0/1:10,8:17:0.02:0,0,1	0/0:23,0:23:54.66:0,55,1125	0/0:19,0:19:42.13:0,42,817	0/0:32,0:31:66.35:0,66,1306	1/1:27,7:34:2.73:47,3,0	1/1:13,9:22:6.74:109,7,0	0/1:17,8:24:57.48:411,0,57	0/1:19,5:24:99:430,0,217	0/1:25,4:29:99:287,0,290	0/1:15,5:19:0.03:0,0,0	0/0:16,2:17:0.45:0,0,1	0/0:11,0:11:21.07:0,21,403	0/0:14,0:14:32.97:0,33,640	0/0:42,0:42:99:0,111,2293	0/0:15,0:15:29.76:0,30,579	0/1:26,22:48:99:1818,0,322	0/1:16,15:31:99:511,0,105	0/1:8,4:12:99:170,0,201
chr10	14338677	.	G	GCACA	1764.20	PASS	AB=0.982;AC=16;AF=0.286;AN=56;BaseQRankSum=10.292;DP=705;FS=1.509;HRun=0;HaplotypeScore=311.9262;InbreedingCoeff=-0.1549;MQ=41.66;MQ0=10;MQRankSum=-10.015;QD=4.90;ReadPosRankSum=4.385;VQSLOD=1.3871;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,102,2033	0/1:8,0:8:12.88:13,0,20	0/0:17,0:2:6.02:0,6,94	0/0:23,0:10:21.38:0,21,496	1/1:33,0:33:1.44:6,1,0	0/0:19,0:19:24.08:0,24,390	0/0:36,0:36:26.45:0,26,417	0/1:32,0:30:75.84:76,0,565	0/1:32,0:32:78.11:169,0,78	0/1:30,0:30:99:263,0,340	1/1:18,0:17:0.25:1,0,0	0/0:23,0:23:48.62:0,49,962	0/0:17,0:17:39.12:0,39,772	0/0:31,0:30:63.36:0,63,1278	0/0:29,0:29:2.67:0,3,11	0/1:22,0:22:36.36:36,0,47	0/1:22,1:22:79.07:110,0,79	0/1:23,0:23:25.77:26,0,158	0/1:29,0:28:99:366,0,165	0/1:14,2:15:0.01:0,0,0	0/0:19,0:19:2.96:0,3,21	0/0:13,0:13:24.06:0,24,425	0/0:14,0:14:35.99:0,36,701	0/0:44,0:44:99:0,105,2110	0/0:14,0:14:27.09:0,27,518	0/1:47,0:47:99:545,0,267	0/1:31,1:32:99:153,0,140	0/1:14,0:14:92.56:144,0,93
chr10	14338679	.	G	GCA	6197.22	PASS	AB=0.743;AC=24;AF=0.429;AN=56;BaseQRankSum=15.059;DP=685;FS=4.982;HRun=0;HaplotypeScore=263.4581;InbreedingCoeff=0.5041;MQ=41.97;MQ0=9;MQRankSum=-12.134;QD=16.31;ReadPosRankSum=2.647;VQSLOD=4.0526;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,99,1444	1/1:1,4:7:6.57:53,7,0	0/0:17,0:4:6.02:0,6,95	0/0:20,0:10:24.19:0,24,383	0/1:8,15:29:11.67:12,0,27	0/0:18,0:18:26.95:0,27,305	0/0:35,0:35:28.42:0,28,345	0/1:31,3:31:80.83:770,0,81	1/1:9,12:32:11.26:267,11,0	1/1:14,9:29:5.03:900,5,0	0/1:6,9:14:21.78:28,0,22	0/0:22,0:22:51.15:0,51,734	0/0:17,0:17:36.12:0,36,528	0/0:30,0:29:60.17:0,60,903	1/1:17,7:30:10.99:74,11,0	1/1:6,9:22:17.62:183,18,0	1/1:12,8:23:38.84:461,39,0	1/1:15,5:21:18.30:422,18,0	0/1:19,4:27:83.36:335,0,83	0/0:11,5:16:2.84:0,3,14	0/1:18,2:19:6.23:39,0,6	0/0:13,0:13:24.07:0,24,338	0/0:14,0:14:36.08:0,36,481	0/0:44,0:44:99:0,114,1749	0/0:14,0:14:27.06:0,27,370	1/1:12,21:44:64.13:1620,64,0	1/1:9,15:31:56.27:683,56,0	0/1:7,4:14:11.91:349,0,12
chr10	14338681	.	G	GCACA	3083.69	PASS	AB=0.981;AC=18;AF=0.321;AN=56;BaseQRankSum=12.349;DP=686;FS=0.954;HRun=0;HaplotypeScore=295.4011;InbreedingCoeff=0.2652;MQ=43.26;MQ0=9;MQRankSum=-11.308;QD=8.94;ReadPosRankSum=4.087;VQSLOD=2.2720;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:93.29:0,93,1899	0/0:7,0:7:0.76:0,1,2	0/0:18,0:4:12.04:0,12,216	0/0:20,0:11:29.89:0,30,544	1/1:29,0:29:1.45:5,1,0	0/0:18,0:18:27.09:0,27,452	0/0:37,0:37:31.65:0,32,537	0/1:32,2:31:99:357,0,190	1/1:32,1:33:10.42:286,10,0	0/1:28,1:29:42.66:380,0,43	0/0:14,0:13:2.22:0,2,8	0/0:22,0:22:48.16:0,48,982	0/0:17,0:17:39.13:0,39,785	0/0:31,0:30:60.35:0,60,1237	0/0:30,0:30:2.31:0,2,28	0/1:23,0:23:18.41:95,0,18	1/1:23,0:22:11.39:229,11,0	0/1:21,0:21:17.44:17,0,66	0/1:24,0:23:84.31:477,0,84	0/1:18,0:17:0.01:0,0,0	1/1:20,1:20:0.30:0,0,0	0/0:13,0:13:24.08:0,24,465	0/0:14,0:14:32.97:0,33,640	0/0:44,0:44:99:0,114,2358	0/0:14,0:14:27.07:0,27,478	0/1:44,0:44:60.51:976,0,61	1/1:31,0:32:11.74:209,12,0	0/1:13,1:14:4.04:210,0,4
chr10	14346345	.	CT	C	623.16	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=1.772;DP=668;FS=12.517;HRun=5;HaplotypeScore=90.8120;InbreedingCoeff=0.9108;MQ=69.08;MQ0=3;MQRankSum=-1.298;QD=14.49;ReadPosRankSum=-0.967;VQSLOD=1.9262;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:73.97:0,74,975	0/0:15,0:15:9.95:0,10,60	0/0:43,0:25:24.67:0,25,274	0/0:25,0:14:25.33:0,25,175	0/0:31,0:31:34.04:0,34,177	1/1:1,27:28:45.13:508,45,0	1/1:2,13:15:21.06:236,21,0	0/0:27,0:27:17.95:0,18,175	0/0:25,0:25:18.95:0,19,100	0/0:34,1:35:20.47:0,20,182	0/0:21,0:21:16.09:0,16,87	0/0:17,0:17:44.32:0,44,518	0/0:14,0:14:42.11:0,42,538	0/0:28,0:28:77.94:0,78,885	0/0:20,0:20:23.17:0,23,106	0/0:17,0:17:10.57:0,11,42	0/0:27,0:27:29.76:0,30,185	0/0:28,0:28:22.54:0,23,108	0/0:19,0:19:17.04:0,17,172	0/0:24,0:24:17.14:0,17,100	0/0:20,0:20:24.77:0,25,148	0/0:20,0:20:50.62:0,51,588	0/0:21,0:21:51.11:0,51,599	0/0:18,0:18:48.11:0,48,600	0/0:30,0:30:81.14:0,81,958	0/0:27,0:27:37.71:0,38,171	0/0:29,0:29:20.50:0,21,80	0/0:13,0:13:13.09:0,13,65
chr10	14346350	.	TA	T	6134.36	PASS	AB=1.000;AC=35;AF=0.625;AN=56;BaseQRankSum=9.070;DP=623;FS=1.259;HRun=12;HaplotypeScore=67.4858;InbreedingCoeff=0.9062;MQ=69.82;MQ0=3;MQRankSum=-0.414;QD=15.77;ReadPosRankSum=3.639;VQSLOD=5.8725;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,1:28:51.84:0,52,688	1/1:2,11:13:32.87:255,33,0	0/0:42,0:25:8.52:0,9,123	0/0:22,0:11:12.81:0,13,66	1/1:4,24:28:65.62:504,66,0	0/1:30,0:30:29:80,0,29	1/1:13,0:13:17.43:69,17,0	1/1:6,18:25:52.51:418,53,0	1/1:2,19:22:59.56:454,60,0	1/1:5,25:30:77.53:592,78,0	1/1:2,15:17:41.65:310,42,0	0/0:17,0:17:29.20:0,29,350	0/0:16,0:16:42.06:0,42,411	0/0:24,0:26:56.76:0,57,534	1/1:3,17:20:44.82:348,45,0	1/1:1,15:16:29.88:232,30,0	1/1:7,21:28:26.69:387,27,0	1/1:3,22:25:56.76:441,57,0	1/1:6,10:16:32.56:243,33,0	1/1:3,18:21:23.50:364,23,0	1/1:6,15:21:40.91:323,41,0	0/0:17,1:18:15.86:0,16,343	0/0:18,0:19:38.91:0,39,376	0/0:18,0:18:44.98:0,45,430	0/0:26,0:27:71.97:0,72,708	1/1:3,23:26:41.83:463,42,0	1/1:2,25:27:56.69:441,57,0	1/1:2,9:11:26.88:209,27,0
chr10	14348194	.	T	TC	727.22	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-6.274;DP=572;FS=1.744;HRun=6;HaplotypeScore=57.3182;InbreedingCoeff=0.9639;MQ=76.14;MQ0=0;MQRankSum=-3.469;QD=19.65;ReadPosRankSum=-2.058;VQSLOD=2.8184;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:58:99:0,156,1570	0/0:6,0:6:11.99:0,12,113	0/0:14,0:14:31.62:0,32,310	0/0:23,0:23:53.63:0,54,477	0/0:15,0:15:36.06:0,36,359	1/1:4,8:12:18.06:221,18,0	1/1:7,18:25:51.61:626,52,0	0/0:21,0:21:45.08:0,45,454	0/0:16,0:16:42.08:0,42,421	0/0:26,0:26:72.12:0,72,715	0/0:10,0:10:27:0,27,273	0/0:27,0:27:75.17:0,75,765	0/0:18,0:18:51.11:0,51,520	0/0:20,0:20:54.08:0,54,539	0/0:24,0:24:66.15:0,66,672	0/0:16,0:16:39.09:0,39,398	0/0:25,0:25:72.16:0,72,731	0/0:15,0:15:45.10:0,45,458	0/0:23,0:23:51.10:0,51,515	0/0:19,0:19:51.10:0,51,515	0/0:24,0:24:69.16:0,69,704	0/0:19,0:19:54.10:0,54,543	0/0:15,0:15:39.02:0,39,379	0/0:21,0:21:63.14:0,63,643	0/0:18,0:17:51.11:0,51,516	0/0:23,0:23:57.11:0,57,572	0/0:34,0:33:90.19:0,90,917	0/0:5,0:5:12.03:0,12,121
chr10	14349716	.	A	AAAAG	282.38	PASS	AB=0.956;AC=7;AF=0.125;AN=56;BaseQRankSum=4.090;DP=597;FS=2.498;HRun=0;HaplotypeScore=135.6738;InbreedingCoeff=-0.0205;MQ=45.19;MQ0=29;MQRankSum=-1.169;QD=2.00;ReadPosRankSum=0.801;VQSLOD=2.7173;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:34:75.51:0,76,789	0/0:11,0:11:20.32:0,20,122	0/1:11,0:8:21.39:21,0,31	0/1:9,0:2:0.63:14,0,1	0/0:33,0:31:63.27:0,63,373	0/1:20,0:18:73.56:141,0,74	0/1:15,12:26:99:162,0,107	0/0:40,0:39:80.99:0,81,476	0/0:13,0:11:20.39:0,20,136	0/0:19,0:16:38.08:0,38,233	0/0:21,0:20:34.90:0,35,210	0/0:18,0:18:38.94:0,39,423	0/0:21,0:21:43.98:0,44,390	0/0:20,0:20:47.90:0,48,498	0/0:17,0:15:33.73:0,34,218	0/0:17,0:15:25.59:0,26,164	0/1:25,0:22:27.63:28,0,131	0/0:17,0:13:29.69:0,30,212	0/0:26,0:25:20.28:0,20,228	0/0:23,0:21:39.48:0,39,250	0/0:9,0:8:5.94:0,6,41	0/0:13,0:12:29.06:0,29,283	0/0:18,0:17:32.83:0,33,340	0/0:26,0:23:36.71:0,37,500	0/0:22,0:22:46.03:0,46,442	0/1:33,0:30:18.43:18,0,194	0/1:16,0:15:27.41:27,0,95	0/0:37,0:32:23.92:0,24,373
chr10	14356758	.	ATTTTTT	A	1081.67	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=4.649;DP=618;FS=4.980;HRun=20;HaplotypeScore=141.1401;InbreedingCoeff=0.9523;MQ=60.13;MQ0=18;MQRankSum=-6.075;QD=25.16;ReadPosRankSum=4.323;VQSLOD=-0.6057;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:45:88.02:0,88,1913	0/0:10,0:10:17.98:0,18,399	0/0:32,0:15:10.63:0,11,87	0/0:23,0:9:15.04:0,15,292	0/0:10,0:22:41.73:0,42,527	1/1:7,7:14:22.86:373,23,0	1/1:9,14:28:54.95:829,55,0	0/0:35,0:33:61.81:0,62,1179	0/0:18,0:17:23.53:0,24,508	0/0:12,0:19:42.53:0,43,1091	0/0:25,0:23:50.17:0,50,998	0/0:18,0:19:48.14:0,48,962	0/0:19,0:20:30.10:0,30,735	0/0:11,0:11:24.04:0,24,476	0/0:26,0:26:56.04:0,56,1213	0/0:13,0:26:42.14:0,42,1075	0/0:22,0:20:34.66:0,35,578	0/0:17,0:17:31.31:0,31,571	0/0:24,0:22:47.50:0,48,1110	0/0:19,0:19:36.05:0,36,832	0/0:12,0:11:16.30:0,16,344	0/0:17,0:22:46.95:0,47,861	0/0:12,0:14:26.37:0,26,483	0/0:19,0:23:27.09:0,27,618	0/0:14,0:22:54.13:0,54,1313	0/0:13,0:28:62.22:0,62,1211	0/0:23,0:23:54.14:0,54,1098	0/0:12,0:10:18.06:0,18,540
chr10	14358927	.	AC	A	240.96	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=6.645;DP=560;FS=0.000;HRun=1;HaplotypeScore=61.3748;InbreedingCoeff=0.7989;MQ=60.52;MQ0=3;MQRankSum=-2.413;QD=6.88;ReadPosRankSum=-2.476;VQSLOD=-0.3102;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,105,1562	0/0:13,0:13:35.88:0,36,479	0/0:15,0:10:29.64:0,30,349	0/1:12,0:7:6.01:6,0,39	0/0:23,0:23:65.79:0,66,928	1/1:9,7:16:29.88:258,30,0	1/1:5,2:6:11.96:98,12,0	0/0:41,0:40:99:0,114,1605	0/0:17,0:17:51.17:0,51,756	0/0:27,0:27:78.26:0,78,1151	0/0:21,0:21:60.20:0,60,880	0/0:13,0:13:39.13:0,39,583	0/0:23,0:23:60.18:0,60,874	0/0:17,0:17:48.12:0,48,710	0/0:17,0:17:48.15:0,48,694	0/0:16,0:16:48.16:0,48,712	0/0:34,0:34:99:0,102,1470	0/0:18,0:19:23.33:0,23,541	0/0:23,0:22:60.17:0,60,829	0/0:17,0:17:51.15:0,51,721	0/0:7,0:7:21.02:0,21,246	0/0:11,0:11:33.09:0,33,471	0/0:16,0:16:48.16:0,48,708	0/0:20,0:20:60.16:0,60,827	0/0:22,0:22:63.08:0,63,876	0/0:26,0:26:78.21:0,78,1078	0/0:31,0:31:93.24:0,93,1274	0/0:20,0:20:60.20:0,60,891
chr10	14358931	.	AC	A	257.29	PASS	AB=0.923;AC=5;AF=0.089;AN=56;BaseQRankSum=7.524;DP=575;FS=1.980;HRun=1;HaplotypeScore=65.0320;InbreedingCoeff=0.7633;MQ=60.54;MQ0=3;MQRankSum=-1.238;QD=8.04;ReadPosRankSum=-1.591;VQSLOD=0.3722;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,107,1235	0/0:14,0:14:39.08:0,39,471	0/0:17,0:11:22.40:0,22,212	0/1:10,1:7:27.71:28,0,32	0/0:23,0:23:69.10:0,69,803	1/1:13,1:14:30.32:255,30,0	1/1:4,2:5:11.98:100,12,0	0/0:40,0:39:99:0,100,1197	0/0:17,0:17:51.12:0,51,609	0/0:26,0:26:78.19:0,78,935	0/0:22,0:22:66.17:0,66,808	0/0:14,0:14:42.10:0,42,510	0/0:23,0:23:66.15:0,66,784	0/0:20,0:20:54.54:0,55,620	0/0:19,0:19:56.98:0,57,636	0/0:16,0:16:43.95:0,44,561	0/0:37,0:37:99:0,105,1259	0/0:19,0:20:48.51:0,49,571	0/0:24,0:23:59.13:0,59,684	0/0:16,0:16:47.99:0,48,519	0/0:10,0:10:26.98:0,27,300	0/0:11,0:11:28.89:0,29,358	0/0:16,0:16:48.14:0,48,603	0/0:19,0:19:57.11:0,57,689	0/0:22,0:22:61.87:0,62,762	0/0:24,0:24:72.16:0,72,872	0/0:31,0:31:91.01:0,91,1050	0/0:21,0:21:58.14:0,58,657
chr10	14359762	.	G	GCAAGA	2800.73	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-5.050;DP=840;FS=4.213;HRun=0;HaplotypeScore=151.1574;InbreedingCoeff=0.9590;MQ=81.40;MQ0=0;MQRankSum=-5.316;QD=51.87;ReadPosRankSum=-0.882;VQSLOD=3.8488;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:64,0:64:99:0,175,3430	0/0:5,0:5:15.05:0,15,296	0/0:13,0:13:8.40:0,8,468	0/0:33,0:32:61.73:0,62,1245	0/0:19,0:19:54.19:0,54,1068	1/1:5,19:24:45.15:1372,45,0	1/1:5,23:30:51.18:1550,51,0	0/0:33,0:33:96.31:0,96,1823	0/0:32,0:32:81.28:0,81,1648	0/0:40,0:40:99:0,114,2256	0/0:11,0:11:30.10:0,30,616	0/0:38,0:38:99:0,102,2018	0/0:40,0:40:99:0,117,2311	0/0:33,0:33:84.29:0,84,1683	0/0:43,0:43:99:0,123,2464	0/0:34,0:34:96.33:0,96,1969	0/0:41,0:41:99:0,108,2161	0/0:29,0:29:87.30:0,87,1760	0/0:17,0:17:45.15:0,45,870	0/0:24,0:24:66.23:0,66,1341	0/0:60,0:60:99:0,160,3166	0/0:24,0:24:66.11:0,66,1318	0/0:17,0:17:45.15:0,45,922	0/0:34,0:34:93.02:0,93,1809	0/0:27,0:27:72.25:0,72,1450	0/0:40,0:40:99:0,111,2143	0/0:23,0:23:63.22:0,63,1277	0/0:12,0:12:36.12:0,36,739
chr10	14360134	.	A	AAAAAG	1548.65	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=-3.642;DP=731;FS=1.588;HRun=0;HaplotypeScore=135.8786;InbreedingCoeff=0.7416;MQ=77.29;MQ0=6;MQRankSum=-2.033;QD=13.95;ReadPosRankSum=1.127;VQSLOD=3.4528;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:81.21:0,81,1398	0/0:9,0:9:21.06:0,21,333	0/1:70,0:31:64.81:65,0,241	0/0:68,0:33:6.65:0,7,592	0/0:19,0:18:48.13:0,48,791	1/1:4,12:17:33.11:933,33,0	1/1:8,16:24:24.55:680,25,0	0/0:33,0:33:63.20:0,63,1051	0/0:16,0:16:36.07:0,36,604	0/0:23,0:23:54.15:0,54,885	0/0:19,0:19:57.14:0,57,955	0/0:23,0:23:54.18:0,54,954	0/0:22,0:22:48.13:0,48,743	0/0:16,0:16:48.15:0,48,813	0/0:14,0:14:39.13:0,39,716	0/0:23,0:23:57.11:0,57,881	0/0:35,0:35:53.62:0,54,1393	0/0:30,0:30:69.19:0,69,1162	0/0:27,0:27:57.14:0,57,912	0/0:30,0:30:69.21:0,69,1178	0/0:18,0:18:45.14:0,45,775	0/0:30,0:30:81.17:0,81,1327	0/0:15,0:15:30.06:0,30,464	0/0:20,0:20:54.06:0,54,814	0/0:34,0:34:93.23:0,93,1552	0/0:30,0:30:72.10:0,72,1153	0/0:29,0:29:72.19:0,72,1179	0/0:7,0:7:14.99:0,15,210
chr10	14361951	.	G	GACAAGCA	28825.13	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=-7.079;DP=701;FS=2.535;HRun=0;HaplotypeScore=149.1880;InbreedingCoeff=0.9954;MQ=81.66;MQ0=0;MQRankSum=-19.085;QD=79.41;ReadPosRankSum=-2.585;VQSLOD=5.0012;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:63,0:62:99:0,153,3655	1/1:3,12:16:42.03:1425,42,0	0/0:30,0:31:84.25:0,84,1898	0/0:22,0:22:48.16:0,48,1161	1/1:4,15:19:48.12:1534,48,0	0/0:22,0:22:54.18:0,54,1348	0/0:39,0:39:99:0,108,2613	1/1:20,20:39:93.21:3380,93,0	1/1:9,15:25:60.21:2118,60,0	1/1:11,19:33:87.24:2984,87,0	1/1:4,11:16:36.04:1081,36,0	0/0:21,0:21:54.19:0,54,1347	0/0:20,0:20:57.19:0,57,1327	0/0:27,0:27:72.25:0,72,1797	1/1:6,20:27:72.25:2570,72,0	1/1:3,18:21:42.14:1572,42,0	1/1:6,9:15:27.09:987,27,0	1/1:6,7:14:27.09:1051,27,0	1/1:13,8:21:57.18:1954,57,0	1/1:9,17:26:63.22:2076,63,0	1/1:15,10:29:42.14:1264,42,0	0/0:24,0:24:63.22:0,63,1546	0/0:18,0:18:48.15:0,48,1148	0/0:28,0:28:75.18:0,75,1715	0/0:23,0:23:66.20:0,66,1568	1/1:12,15:30:81.28:2714,81,0	1/1:7,15:24:46.71:1650,47,0	1/1:2,4:6:12.04:467,12,0
chr10	14366901	.	T	TA	5600.02	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=-10.628;DP=474;FS=22.670;HRun=11;HaplotypeScore=50.7179;InbreedingCoeff=0.9594;MQ=61.63;MQ0=11;MQRankSum=-0.756;QD=19.58;ReadPosRankSum=-2.201;VQSLOD=3.4107;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:26:58.75:0,59,440	1/1:2,4:6:12.02:122,12,0	0/0:6,0:5:13.77:0,14,101	0/0:8,1:5:7.22:0,7,49	1/1:3,16:19:44.78:405,45,0	0/0:2,0:26:42.77:0,43,124	0/0:3,0:22:32.02:0,32,102	1/1:17,18:26:53.83:496,54,0	1/1:1,12:13:21.04:210,21,0	1/1:5,18:23:54.07:532,54,0	1/1:2,14:17:39.04:385,39,0	0/0:15,0:15:32.80:0,33,249	0/0:13,0:14:35.52:0,36,266	0/0:14,0:14:29.87:0,30,232	1/1:2,8:10:24.05:244,24,0	1/1:1,17:18:33.07:335,33,0	1/1:4,21:25:51.10:518,51,0	1/1:3,17:20:21.86:403,22,0	1/1:4,14:19:21.68:382,22,0	1/1:3,10:13:29.27:281,29,0	1/1:1,6:7:14.82:135,15,0	0/0:3,0:3:5.73:0,6,35	0/0:11,0:11:23.64:0,24,183	0/0:8,0:8:17.91:0,18,139	0/0:32,0:32:80.35:0,80,626	1/1:6,18:24:54.05:525,54,0	1/1:5,14:20:32.48:384,32,0	1/1:2,12:14:24.01:244,24,0
chr10	14367630	.	TGTGCGTGCGTGC	T	10108.86	PASS	AB=0.913;AC=35;AF=0.625;AN=56;BaseQRankSum=7.979;DP=633;FS=12.565;HRun=0;HaplotypeScore=234.2803;InbreedingCoeff=0.6345;MQ=57.80;MQ0=12;MQRankSum=-1.097;QD=25.21;ReadPosRankSum=-3.497;VQSLOD=1.9035;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:93.94:0,94,2776	1/1:3,0:3:6:72,6,0	0/1:27,0:17:50.24:50,0,113	0/1:28,0:16:41.95:42,0,75	0/1:4,14:17:0:0,0,0	0/1:19,0:18:20.41:20,0,976	0/1:23,0:23:29.87:30,0,975	1/1:21,0:20:52.09:629,52,0	1/1:21,0:21:47.43:1107,47,0	1/1:32,0:32:56.54:773,57,0	1/1:13,0:13:27.07:528,27,0	0/0:35,0:35:87.67:0,88,2764	0/0:19,0:19:18.96:0,19,1330	0/0:28,0:27:72.18:0,72,2185	1/1:25,0:25:38.63:876,39,0	1/1:29,0:29:63.17:1252,63,0	1/1:19,0:18:42.78:818,43,0	1/1:9,0:9:23.10:410,23,0	1/1:15,0:14:39.47:557,39,0	1/1:11,0:11:0.89:2,1,0	1/1:25,0:21:42.11:910,42,0	0/0:24,0:23:60.19:0,60,1909	0/0:15,0:14:39.13:0,39,1209	0/0:43,0:43:97.48:0,97,2316	0/0:24,0:24:63.20:0,63,2168	1/1:34,0:33:58.18:971,58,0	1/1:21,0:17:39.54:715,40,0	1/1:6,0:6:18.04:347,18,0
chr10	14367632	.	TGCGTGCGTGC	T	10699.10	PASS	AB=0.989;AC=35;AF=0.625;AN=56;BaseQRankSum=7.193;DP=624;FS=10.480;HRun=0;HaplotypeScore=210.3094;InbreedingCoeff=0.6334;MQ=57.59;MQ0=13;MQRankSum=-0.693;QD=26.95;ReadPosRankSum=-3.848;VQSLOD=2.0976;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:92.30:0,92,3006	1/1:3,0:3:6:73,6,0	0/1:23,0:14:75.31:75,0,258	0/1:27,0:15:29.42:29,0,204	0/1:17,1:17:0:0,0,0	0/1:19,0:18:22.68:23,0,1000	0/1:25,0:25:99:101,0,1164	1/1:3,18:20:52.77:669,53,0	1/1:21,0:21:47.27:1125,47,0	1/1:0,32:32:56.74:891,57,0	1/1:14,0:14:30.08:617,30,0	0/0:33,0:33:87.25:0,87,2825	0/0:19,0:19:18.96:0,19,1367	0/0:28,0:27:72.22:0,72,2275	1/1:25,1:26:41.90:919,42,0	1/1:28,0:28:63.18:1273,63,0	1/1:20,0:19:45.39:889,45,0	1/1:7,1:8:22.32:438,22,0	1/1:1,14:14:39.48:599,39,0	1/1:0,11:11:0.89:2,1,0	1/1:25,0:21:42.12:933,42,0	0/0:24,0:23:63.20:0,63,2016	0/0:15,0:14:39.13:0,39,1318	0/0:42,0:42:97.30:0,97,2743	0/0:23,0:23:63.19:0,63,2264	1/1:1,33:33:57.83:993,58,0	1/1:18,0:16:39.52:700,40,0	1/1:7,0:6:18.04:350,18,0
chr10	14367648	.	TGC	T	3992.17	PASS	AB=0.990;AC=41;AF=0.732;AN=56;BaseQRankSum=11.961;DP=615;FS=20.450;HRun=0;HaplotypeScore=146.1916;InbreedingCoeff=0.1103;MQ=51.38;MQ0=18;MQRankSum=-1.355;QD=7.13;ReadPosRankSum=-1.808;VQSLOD=1.7044;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:48,0:48:99:153,0,262	1/1:3,0:3:2.92:24,3,0	1/1:8,0:1:2.88:15,3,0	0/1:9,0:3:2.21:2,0,21	0/0:17,1:17:0.45:0,0,1	0/1:18,0:17:13.64:14,0,195	0/1:23,0:23:61.21:61,0,195	1/1:22,0:19:26.12:170,26,0	1/1:26,0:26:49.23:411,49,0	1/1:27,0:27:29.51:227,30,0	1/1:17,0:17:25.67:195,26,0	0/1:31,2:33:91.79:92,0,310	0/1:25,1:26:79.45:79,0,182	0/1:30,0:29:56.67:57,0,313	1/1:25,1:26:41.93:346,42,0	1/1:22,0:22:41.87:335,42,0	1/1:22,0:21:41.87:300,42,0	1/1:9,1:10:25.19:178,25,0	1/1:12,0:10:24.99:169,25,0	1/1:12,0:12:0.47:1,0,0	1/1:30,0:24:31.46:309,31,0	0/0:23,0:22:34.79:0,35,325	0/0:14,0:13:6.08:0,6,155	0/1:39,0:38:99:142,0,218	0/1:34,0:34:33.11:33,0,222	1/1:34,0:33:40.78:299,41,0	1/1:21,0:18:35.80:274,36,0	1/1:8,0:6:13.19:107,13,0
chr10	14367650	.	CGT	C	1932.66	PASS	AB=0.640;AC=21;AF=0.389;AN=54;BaseQRankSum=-4.182;DP=622;FS=11.856;HRun=0;HaplotypeScore=153.1433;InbreedingCoeff=0.5214;MQ=51.14;MQ0=20;MQRankSum=0.311;QD=6.17;ReadPosRankSum=5.250;VQSLOD=2.3447;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:21,25:48:33.72:431,0,34	0/0:3,0:3:5.49:0,5,49	./.	0/0:11,0:4:2.99:0,3,24	0/0:19,0:18:2.97:0,3,25	0/0:19,0:18:11.63:0,12,111	0/0:23,0:23:9.89:0,10,92	0/0:21,0:18:6.15:0,6,41	0/0:26,0:26:2.87:0,3,28	1/1:25,0:25:0.20:12,0,0	0/0:18,0:18:5.49:0,5,34	1/1:24,9:34:23.05:245,23,0	1/1:16,10:26:23.90:246,24,0	1/1:23,8:30:17.41:175,17,0	1/1:27,0:27:2.78:11,3,0	0/0:20,0:20:4.81:0,5,30	0/0:23,0:22:3.17:0,3,25	0/0:11,0:11:0.47:0,0,1	0/0:12,0:10:0.40:0,0,1	1/1:11,0:11:0.47:1,0,0	0/0:30,0:24:6.95:0,7,62	1/1:20,2:21:5.85:48,6,0	1/1:10,2:13:11.85:105,12,0	1/1:18,22:40:46.77:467,47,0	1/1:17,14:34:38.28:357,38,0	0/0:34,0:33:9.92:0,10,64	0/0:22,0:19:2.18:0,2,7	0/0:8,0:6:2.99:0,3,24
chr10	14368542	.	TAAA	T	6338.64	PASS	AB=0.900;AC=33;AF=0.589;AN=56;BaseQRankSum=9.298;DP=550;FS=3.416;HRun=14;HaplotypeScore=86.3042;InbreedingCoeff=0.9060;MQ=68.35;MQ0=0;MQRankSum=-0.801;QD=18.16;ReadPosRankSum=6.301;VQSLOD=3.8764;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:33:84.74:0,85,1413	1/1:3,3:6:2.70:35,3,0	0/0:21,0:17:40.69:0,41,469	0/0:10,0:10:11.88:0,12,184	1/1:6,12:18:19.94:243,20,0	0/0:11,0:14:21.05:0,21,298	0/0:15,0:17:39.08:0,39,584	1/1:9,18:28:43.55:523,44,0	1/1:2,18:21:49.70:594,50,0	1/1:5,16:22:51.01:572,51,0	1/1:2,11:13:20.88:231,21,0	0/0:17,0:20:42.01:0,42,673	0/0:19,0:19:42.14:0,42,693	0/0:22,0:22:54.18:0,54,931	1/1:3,18:21:42.04:491,42,0	1/1:5,19:26:53.91:566,54,0	1/1:3,23:26:47.87:561,48,0	1/1:3,15:20:28.59:348,29,0	1/1:6,12:20:41.87:456,42,0	1/1:5,12:18:26.79:298,27,0	1/1:6,18:27:46.57:475,47,0	0/0:17,0:19:48.13:0,48,777	0/0:13,0:13:30.07:0,30,482	0/1:23,3:26:6.93:7,0,919	0/0:9,0:13:27.07:0,27,447	1/1:7,17:24:35.91:410,36,0	1/1:5,12:18:23.84:248,24,0	1/1:3,9:14:26.85:281,27,0
chr10	14368755	.	GCT	G	2752.70	PASS	AB=0.863;AC=22;AF=0.423;AN=52;BaseQRankSum=3.628;DP=458;FS=1.878;HRun=0;HaplotypeScore=88.3683;InbreedingCoeff=-0.2330;MQ=42.91;MQ0=54;MQRankSum=3.843;QD=7.60;ReadPosRankSum=0.585;VQSLOD=3.2969;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:14,8:20:22.85:23,0,48	1/1:5,0:5:5.85:90,6,0	./.	./.	0/1:7,9:12:0:0,0,0	0/0:5,9:13:5.12:0,5,24	0/0:14,5:12:3.48:0,3,37	0/0:13,0:9:26.64:0,27,265	0/1:12,0:10:13.29:39,0,13	0/1:13,6:16:99:219,0,228	0/0:6,0:3:0:0,0,0	0/1:13,6:16:3.92:4,0,81	0/1:13,0:11:60.03:60,0,102	0/0:10,8:13:6.51:0,7,67	0/1:7,17:22:4.82:5,0,12	0/1:21,0:20:5.63:151,0,6	0/1:21,4:25:36.63:361,0,37	0/1:26,2:26:8.23:692,0,8	0/1:11,0:9:59.39:59,0,112	1/1:11,0:9:3.70:33,4,0	1/1:48,1:41:25.40:542,25,0	0/0:9,3:11:11.99:0,12,151	0/1:16,1:14:53.28:78,0,53	0/1:34,0:31:21.49:21,0,450	0/0:7,7:13:8.01:0,8,81	0/1:7,11:15:83.73:384,0,84	0/1:9,0:7:15.04:54,0,15	0/1:8,0:5:5.62:81,0,6
chr10	14368757	.	TTGTGTGTG	T	1827.26	PASS	AB=0.946;AC=22;AF=0.440;AN=50;BaseQRankSum=-1.664;DP=457;FS=46.555;HRun=0;HaplotypeScore=117.1453;InbreedingCoeff=0.3635;MQ=42.98;MQ0=54;MQRankSum=1.594;QD=7.46;ReadPosRankSum=-0.615;VQSLOD=0.4519;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:19:6.85:0,7,156	1/1:6,0:6:3.15:76,3,0	./.	./.	1/1:17,0:13:5.98:70,6,0	0/0:14,0:13:0.47:0,0,1	0/0:19,0:12:3.01:0,3,79	./.	0/0:14,0:12:0.47:0,0,1	0/1:19,0:16:99:132,0,189	0/0:5,1:3:0.47:0,0,1	0/0:20,0:17:18.52:0,19,246	0/0:13,0:11:4.46:0,4,168	0/0:18,0:13:6:0,6,75	1/1:22,0:21:2.15:60,2,0	1/1:11,10:20:2.84:71,3,0	1/1:26,0:25:13.99:277,14,0	0/1:28,1:27:31.57:414,0,32	0/1:7,2:8:73.14:103,0,73	1/1:9,2:9:2.76:19,3,0	1/1:49,0:41:16.85:365,17,0	0/1:11,0:10:0:0,0,0	0/0:17,0:14:6.95:0,7,112	0/0:33,0:31:30.52:0,31,726	0/0:14,0:13:6.96:0,7,173	1/1:16,0:15:21.11:308,21,0	0/0:9,0:7:0:0,0,0	1/1:8,0:5:3.34:79,3,0
chr10	14368765	.	G	GCT	725.10	PASS	AB=0.998;AC=14;AF=0.259;AN=54;BaseQRankSum=0.746;DP=478;FS=32.505;HRun=0;HaplotypeScore=98.1633;InbreedingCoeff=-0.1749;MQ=43.77;MQ0=51;MQRankSum=4.445;QD=2.97;ReadPosRankSum=1.707;VQSLOD=0.4217;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:19:9.94:0,10,128	0/1:7,0:7:31.51:32,0,37	./.	0/0:8,0:2:6.02:0,6,84	0/1:19,0:15:9.97:108,0,10	0/0:13,0:12:3.01:0,3,46	0/0:19,0:13:9.03:0,9,123	0/1:12,0:7:6.59:7,0,170	0/0:12,3:13:3.73:0,4,48	0/1:20,0:17:12.82:13,0,425	0/1:6,0:3:0:0,0,0	0/0:23,0:20:21.41:0,21,260	0/0:13,0:11:18.51:0,19,233	0/0:19,0:14:13.71:0,14,159	1/1:22,0:20:9.02:135,9,0	0/1:22,0:21:29.34:29,0,159	0/1:26,0:25:92.14:92,0,212	0/1:25,0:23:99:144,0,400	0/1:8,0:8:21.89:22,0,179	0/1:11,0:9:11.62:12,0,24	0/1:48,1:41:99:138,0,236	0/0:10,0:9:5.85:0,6,90	0/0:17,0:14:11.52:0,12,129	0/0:36,0:33:50.99:0,51,774	0/0:12,0:12:7.70:0,8,97	0/1:17,0:16:99:137,0,220	0/0:8,4:11:5.75:0,6,75	0/0:10,0:7:2.92:0,3,75
chr10	14369286	.	AGAG	A	1570.23	PASS	AB=1.000;AC=28;AF=0.560;AN=50;BaseQRankSum=-1.644;DP=398;FS=18.985;HRun=0;HaplotypeScore=62.1048;InbreedingCoeff=0.7356;MQ=51.19;MQ0=79;MQRankSum=-1.225;QD=8.63;ReadPosRankSum=0.628;VQSLOD=1.1794;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:14:5.28:0,5,105	1/1:4,0:4:9.92:119,10,0	0/0:34,0:8:12.79:0,13,139	0/0:47,0:15:20.49:0,20,151	1/1:22,0:22:6.49:71,6,0	0/0:11,0:8:6.02:0,6,80	0/0:12,0:7:8.92:0,9,83	1/1:18,0:12:11.70:155,12,0	0/1:12,0:10:0.16:0,0,2	1/1:14,0:12:10.38:199,10,0	1/1:13,0:12:6.96:78,7,0	0/0:13,0:7:11.73:0,12,139	0/0:13,0:12:15.45:0,15,220	0/0:8,0:6:5.93:0,6,75	./.	1/1:13,0:12:15.56:126,16,0	1/1:10,0:8:2.45:41,2,0	1/1:12,0:6:6.07:20,6,0	1/1:11,0:8:21.07:304,21,0	1/1:6,9:14:12.68:115,13,0	./.	0/0:11,0:12:14.26:0,14,154	0/1:7,0:7:0.13:1,0,0	./.	0/0:22,0:22:14.67:0,15,251	1/1:13,1:13:28.48:349,28,0	1/1:15,0:15:16.49:169,16,0	1/1:1,0:1:0.47:1,0,0
chr10	14373625	.	G	GGCC	7084.37	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=14.593;DP=420;FS=115.011;HRun=0;HaplotypeScore=98.0896;InbreedingCoeff=0.9558;MQ=98.49;MQ0=0;MQRankSum=-14.913;QD=42.94;ReadPosRankSum=1.723;VQSLOD=1.5393;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,102,1860	1/1:2,6:8:21.04:333,21,0	0/0:24,0:24:63.19:0,63,1103	0/0:27,0:27:65.31:0,65,1198	1/1:2,13:15:33.11:588,33,0	1/1:0,6:6:15.94:272,16,0	1/1:2,4:6:18.02:282,18,0	1/1:3,5:8:18.05:324,18,0	1/1:1,10:11:30.02:475,30,0	1/1:0,6:6:14.19:278,14,0	1/1:0,7:6:12.04:209,12,0	0/0:31,0:31:84.29:0,84,1547	0/0:18,0:18:54.19:0,54,1001	0/0:20,0:20:60.21:0,60,1117	1/1:0,9:9:27.01:415,27,0	1/1:0,11:12:36.10:616,36,0	1/1:2,8:10:18.53:318,19,0	1/1:1,6:7:18.06:327,18,0	1/1:0,7:9:27.08:460,27,0	1/1:0,16:15:33.11:590,33,0	1/1:1,2:3:2.27:51,2,0	0/0:23,0:23:69.22:0,69,1246	0/0:23,0:23:63.22:0,63,1174	0/0:27,0:26:81.28:0,81,1510	0/0:26,0:26:78.26:0,78,1418	1/1:1,12:12:36.12:656,36,0	1/1:3,9:12:30.09:512,30,0	1/1:3,4:7:21.07:377,21,0
chr10	14373626	.	A	AGT	4452.02	PASS	AB=0.612;AC=33;AF=0.589;AN=56;BaseQRankSum=15.772;DP=416;FS=138.381;HRun=0;HaplotypeScore=97.4564;InbreedingCoeff=0.8001;MQ=98.07;MQ0=0;MQRankSum=-15.675;QD=27.31;ReadPosRankSum=2.502;VQSLOD=1.3733;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,102,1612	1/1:1,6:7:18.93:209,19,0	0/0:23,0:23:56.31:0,56,848	0/0:27,0:27:66.20:0,66,1029	1/1:2,13:15:33.46:397,33,0	1/1:0,6:6:17.97:206,18,0	1/1:2,4:6:11.87:130,12,0	0/1:4,5:9:2.63:190,0,3	1/1:1,10:11:26.57:307,27,0	1/1:0,6:6:14.97:194,15,0	1/1:0,7:6:17.46:132,17,0	0/0:31,0:31:87.28:0,87,1389	0/0:18,0:18:54.17:0,54,856	0/0:21,0:21:60.20:0,60,978	1/1:0,9:9:23.20:265,23,0	1/1:1,11:12:34.82:399,35,0	0/1:2,8:10:0.14:184,0,0	1/1:1,6:7:18.06:225,18,0	1/1:2,7:9:21:274,21,0	1/1:0,16:15:41.81:457,42,0	1/1:1,2:3:2.77:16,3,0	0/0:22,0:22:66.22:0,66,1052	0/0:22,0:22:63.21:0,63,1015	0/0:27,0:26:81.28:0,81,1316	0/0:26,0:26:78.23:0,78,1223	1/1:1,12:12:13.57:394,14,0	1/1:1,9:10:27.08:335,27,0	0/1:3,4:7:21.22:139,0,21
chr10	14373702	.	CT	C	35.31	PASS	AC=4;AF=0.154;AN=26;BaseQRankSum=2.413;DP=228;FS=5.051;HRun=1;HaplotypeScore=64.9956;InbreedingCoeff=0.8055;MQ=91.25;MQ0=4;MQRankSum=-0.739;QD=5.88;ReadPosRankSum=-0.927;VQSLOD=0.1956;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:81.26:0,81,1271	./.	0/0:36,0:24:41.55:0,42,804	0/0:36,0:30:79.32:0,79,1096	./.	./.	0/0:6,0:6:12.04:0,12,191	./.	./.	./.	./.	0/0:19,0:19:57.18:0,57,887	0/0:11,0:11:33.11:0,33,527	0/0:13,0:13:39.11:0,39,575	./.	./.	1/1:0,3:3:6.02:83,6,0	./.	1/1:1,2:1:3.01:42,3,0	./.	./.	0/0:15,0:15:45.11:0,45,650	0/0:16,0:16:45.15:0,45,714	0/0:18,0:18:54.18:0,54,862	0/0:23,0:23:66.20:0,66,1010	./.	./.	./.
chr10	14373733	.	CT	C	553.34	PASS	AC=20;AF=0.455;AN=44;BaseQRankSum=3.899;DP=201;FS=15.477;HRun=1;HaplotypeScore=26.4633;InbreedingCoeff=0.7669;MQ=86.57;MQ0=0;MQRankSum=-2.836;QD=19.76;ReadPosRankSum=-4.737;VQSLOD=1.2802;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:81.28:0,81,1293	./.	0/0:16,1:17:26.25:0,26,667	0/0:14,0:13:34.75:0,35,453	./.	0/0:7,0:7:18.06:0,18,287	0/0:13,0:13:36.12:0,36,574	1/1:0,3:3:9.03:126,9,0	./.	1/1:0,2:2:6.02:84,6,0	1/1:0,2:2:3.01:42,3,0	0/0:12,0:12:33.09:0,33,481	0/0:13,0:13:39.08:0,39,542	0/0:10,0:10:30.10:0,30,462	1/1:0,1:1:3.01:42,3,0	./.	1/1:2,3:5:3.01:42,3,0	1/1:1,2:3:6:65,6,0	1/1:2,1:1:3.01:42,3,0	./.	1/1:0,2:2:3.01:42,3,0	0/0:9,0:9:27.09:0,27,423	0/0:13,0:13:39.06:0,39,593	0/0:19,0:18:57.11:0,57,852	0/0:11,0:11:33.11:0,33,527	./.	1/1:0,5:5:12.04:168,12,0	1/1:1,1:2:6:66,6,0
chr10	14373965	.	T	TTA	32.45	PASS	AB=0.711;AC=3;AF=0.054;AN=56;BaseQRankSum=4.808;DP=297;FS=19.207;HRun=0;HaplotypeScore=40.5207;InbreedingCoeff=-0.0768;MQ=50.34;MQ0=15;MQRankSum=-3.801;QD=1.62;ReadPosRankSum=0.021;VQSLOD=-0.1683;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:23:66.18:0,66,983	0/1:1,1:2:42.69:49,0,43	0/0:2,0:2:3.01:0,3,47	0/0:7,0:2:6.02:0,6,78	0/0:5,3:8:6.81:0,7,143	0/0:18,0:18:48.16:0,48,783	0/0:18,0:16:48.16:0,48,771	0/0:11,0:8:21.07:0,21,333	0/0:6,0:6:18.06:0,18,293	0/0:5,0:5:15.05:0,15,245	0/1:5,2:7:26.44:26,0,133	0/0:10,0:9:27.09:0,27,440	0/0:8,0:8:24.08:0,24,392	0/0:4,0:4:9.03:0,9,147	0/0:11,0:11:33.11:0,33,527	0/0:6,0:6:18.06:0,18,293	0/0:31,0:29:75.26:0,75,1222	0/0:15,0:15:33.11:0,33,538	0/0:16,0:14:42.13:0,42,658	0/1:6,5:11:56.84:57,0,242	0/0:7,0:7:21.07:0,21,342	0/0:9,0:9:27.09:0,27,440	0/0:6,0:6:15.03:0,15,217	0/0:12,0:11:33.11:0,33,532	0/0:8,0:8:24.08:0,24,389	0/0:12,0:10:27.09:0,27,430	0/0:17,0:17:48.16:0,48,782	0/0:4,0:4:12.04:0,12,196
chr10	14378165	.	G	GCACACACA	4663.22	PASS	AB=0.785;AC=29;AF=0.558;AN=52;BaseQRankSum=-3.195;DP=566;FS=16.848;HRun=0;HaplotypeScore=155.0437;InbreedingCoeff=0.6450;MQ=62.68;MQ0=9;MQRankSum=-4.143;QD=15.60;ReadPosRankSum=-3.686;VQSLOD=2.2167;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:42:34.47:0,34,788	1/1:2,0:3:3.01:76,3,0	./.	./.	1/1:7,0:8:8.90:201,9,0	0/0:26,0:27:12.03:0,12,204	0/1:30,0:33:0.04:0,0,229	1/1:23,0:23:33:421,33,0	1/1:12,6:20:9.30:264,9,0	1/1:7,0:12:24.03:411,24,0	1/1:8,0:8:3.01:60,3,0	0/0:23,0:24:33.58:0,34,760	0/0:16,0:20:26.94:0,27,472	0/0:19,0:25:48.14:0,48,988	0/0:9,9:22:0.47:0,0,1	1/1:13,12:27:2.57:63,3,0	1/1:18,18:42:15.05:419,15,0	1/1:18,0:19:27.05:458,27,0	1/1:5,0:8:12.04:241,12,0	1/1:7,0:10:5.79:38,6,0	1/1:41,1:41:57.10:897,57,0	0/0:1,0:5:14.97:0,15,213	0/0:5,0:5:6.02:0,6,125	0/0:25,0:29:38.76:0,39,576	0/0:8,0:11:20.95:0,21,379	0/1:12,7:21:39.18:572,0,39	1/1:8,5:16:18.06:524,18,0	0/1:3,0:6:9.38:19,0,9
chr10	14378199	.	ACG	A	360.70	PASS	AB=0.975;AC=13;AF=0.232;AN=56;BaseQRankSum=8.395;DP=586;FS=8.644;HRun=0;HaplotypeScore=101.9914;InbreedingCoeff=0.0883;MQ=53.23;MQ0=11;MQRankSum=-1.294;QD=1.53;ReadPosRankSum=-2.793;VQSLOD=0.4532;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:47.70:0,48,1035	0/1:4,0:4:15.94:16,0,68	0/1:11,0:8:32.32:32,0,46	0/1:24,0:13:7.87:56,0,8	0/0:12,0:12:20.20:0,20,179	1/1:24,0:24:11.89:84,12,0	1/1:38,0:38:20.45:125,20,0	0/0:29,0:28:48.59:0,49,351	0/1:15,1:15:19.28:19,0,185	0/0:16,0:16:41.21:0,41,341	0/1:5,1:6:12.56:13,0,18	0/0:29,1:30:25.83:0,26,858	0/0:19,0:19:17.82:0,18,470	0/1:29,0:29:7.64:8,0,717	0/0:20,0:20:17.95:0,18,145	0/1:21,0:21:12.49:12,0,71	0/0:37,0:37:39.22:0,39,321	0/0:24,0:24:14.27:0,14,471	0/0:21,0:20:14.90:0,15,203	0/0:8,0:8:8.04:0,8,66	0/1:49,1:48:99:130,0,477	0/1:13,0:11:24.97:25,0,130	0/0:5,0:5:15:0,15,188	0/0:30,0:29:36.35:0,36,554	0/0:12,0:12:5.51:0,6,278	0/0:21,0:20:35.31:0,35,530	0/0:15,0:15:8.97:0,9,188	0/0:5,0:5:8.75:0,9,71
chr10	14378446	.	A	AAT	4564.52	PASS	AB=0.649;AC=27;AF=0.500;AN=54;BaseQRankSum=-10.185;DP=275;FS=2.130;HRun=0;HaplotypeScore=45.7493;InbreedingCoeff=0.3554;MQ=84.28;MQ0=3;MQRankSum=-0.100;QD=24.41;ReadPosRankSum=-2.438;VQSLOD=4.4366;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:3,0:22:53.97:0,54,265	1/1:0,4:4:9.03:146,9,0	0/0:11,0:8:0.21:0,0,1	0/1:25,0:15:4.19:20,0,4	1/1:1,6:7:12.04:172,12,0	0/0:4,0:13:19.89:0,20,98	0/0:1,0:5:8.52:0,9,42	0/1:19,25:43:84.53:1097,0,85	1/1:1,4:6:6.01:75,6,0	1/1:2,2:4:6.02:97,6,0	0/1:1,3:4:24.47:134,0,24	0/0:1,0:5:5.68:0,6,28	0/0:1,0:6:8.52:0,9,42	0/0:1,0:7:17.04:0,17,84	1/1:2,5:7:15.05:243,15,0	1/1:2,2:4:6.02:97,6,0	1/1:3,16:19:11.50:693,11,0	0/1:8,14:23:99:442,0,124	1/1:2,6:8:21.07:333,21,0	1/1:0,4:4:12.04:195,12,0	0/1:2,4:6:24.63:134,0,25	./.	0/0:0,0:3:8.52:0,9,42	0/0:0,0:7:17.04:0,17,84	0/0:0,0:9:17.04:0,17,84	1/1:1,3:4:9.03:146,9,0	0/1:2,8:10:12.59:317,0,13	0/1:2,6:8:52.27:222,0,52
chr10	14380324	.	G	GTT	6939.13	PASS	AB=0.982;AC=38;AF=0.679;AN=56;BaseQRankSum=0.293;DP=577;FS=3.056;HRun=12;HaplotypeScore=97.6708;InbreedingCoeff=0.7809;MQ=68.50;MQ0=5;MQRankSum=-3.654;QD=16.48;ReadPosRankSum=-1.309;VQSLOD=3.8864;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:50:57.15:0,57,844	1/1:6,3:11:19.98:188,20,0	0/1:30,0:19:16.35:16,0,80	0/1:26,1:17:46.95:56,0,47	1/1:7,20:33:75.07:766,75,0	1/1:10,5:15:39.07:441,39,0	1/1:12,5:21:23.30:321,23,0	1/1:11,11:24:6.44:276,6,0	1/1:2,10:12:11.71:137,12,0	1/1:4,21:29:63.06:794,63,0	1/1:10,7:19:35.40:439,35,0	0/0:13,0:13:6.84:0,7,170	0/0:13,0:12:26.97:0,27,234	0/0:18,0:18:20.76:0,21,274	1/1:10,5:16:35.41:384,35,0	1/1:6,16:23:23.39:254,23,0	1/1:7,17:23:33.79:459,34,0	1/1:9,18:27:21.72:409,22,0	1/1:19,0:17:8.08:240,8,0	1/1:3,8:14:27.66:221,28,0	1/1:6,11:18:15.88:175,16,0	0/0:12,0:12:29.98:0,30,270	0/0:18,0:18:16.28:0,16,226	0/0:25,0:26:24.52:0,25,397	0/0:6,0:6:11.97:0,12,111	1/1:23,5:30:34.79:615,35,0	1/1:2,5:10:21.05:273,21,0	1/1:7,8:15:39.86:474,40,0
chr10	14380358	.	AT	A	404.27	PASS	AB=0.917;AC=5;AF=0.089;AN=56;BaseQRankSum=3.347;DP=567;FS=2.063;HRun=12;HaplotypeScore=96.4717;InbreedingCoeff=0.7549;MQ=77.44;MQ0=5;MQRankSum=-0.891;QD=9.63;ReadPosRankSum=0.007;VQSLOD=3.1027;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:73.63:0,74,1026	0/0:6,0:7:17.87:0,18,167	0/0:51,1:30:33.03:0,33,325	0/0:26,0:17:11.93:0,12,107	0/0:27,0:27:74.64:0,75,683	1/1:4,10:14:29.35:217,29,0	1/1:3,13:17:40.85:307,41,0	0/0:24,1:25:21.85:0,22,403	0/1:10,1:11:1.15:1,0,155	0/0:31,0:31:66.02:0,66,635	0/0:18,0:18:23.99:0,24,224	0/0:9,0:9:27.02:0,27,257	0/0:13,1:13:9.83:0,10,281	0/0:16,0:16:24.64:0,25,405	0/0:16,0:17:40.02:0,40,357	0/0:16,0:16:16.38:0,16,260	0/0:25,0:23:47.98:0,48,463	0/0:24,2:27:7.51:0,8,418	0/0:12,0:12:20.80:0,21,183	0/0:13,0:13:30.02:0,30,289	0/0:13,0:13:15:0,15,143	0/0:16,1:17:6.82:0,7,246	0/0:18,0:18:48.09:0,48,481	0/0:21,1:23:30.58:0,31,516	0/0:11,0:13:26.21:0,26,299	0/0:27,0:27:55.85:0,56,586	0/0:16,0:16:35.10:0,35,341	0/0:14,0:15:26.88:0,27,252
chr10	14384711	.	A	AGTGTGT	7749.24	PASS	AB=1.000;AC=29;AF=0.558;AN=52;BaseQRankSum=-4.218;DP=787;FS=12.000;HRun=0;HaplotypeScore=183.3836;InbreedingCoeff=0.8287;MQ=54.59;MQ0=6;MQRankSum=-8.295;QD=18.11;ReadPosRankSum=-2.705;VQSLOD=3.3657;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,104,1957	1/1:5,10:15:8.86:175,9,0	0/0:10,0:8:15.01:0,15,194	0/1:12,0:5:15.97:16,0,22	1/1:8,19:28:3.01:99,3,0	0/0:26,0:28:62.98:0,63,1127	0/0:44,0:44:81.18:0,81,1411	1/1:46,0:44:77.55:767,78,0	1/1:8,20:30:11.87:190,12,0	1/1:14,24:33:68.89:1644,69,0	1/1:0,14:16:6.02:138,6,0	0/0:28,0:29:66.18:0,66,1244	0/0:20,0:23:45.11:0,45,804	0/0:27,0:27:57.44:0,57,1044	1/1:8,28:38:16.61:478,17,0	1/1:9,28:41:33.01:932,33,0	./.	1/1:8,16:27:27.04:672,27,0	1/1:8,12:18:32.91:507,33,0	1/1:5,18:25:8.97:121,9,0	1/1:17,19:36:2.15:12,2,0	0/0:25,0:25:45.12:0,45,894	0/0:20,0:22:53.82:0,54,928	0/0:47,0:48:99:0,99,1758	0/0:24,0:27:49.68:0,50,818	1/1:14,20:39:68.60:1475,69,0	1/1:2,11:16:21.07:524,21,0	./.
chr10	14385681	.	TATG	T	864.39	PASS	AB=0.981;AC=28;AF=0.609;AN=46;BaseQRankSum=9.141;DP=838;FS=7.023;HRun=0;HaplotypeScore=161.1121;InbreedingCoeff=0.4560;MQ=66.73;MQ0=11;MQRankSum=-8.080;QD=1.90;ReadPosRankSum=-2.172;VQSLOD=1.6780;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:26,1:27:32.11:32,0,321	1/1:9,0:9:5.92:39,6,0	./.	./.	./.	0/1:41,0:41:57.48:57,0,158	0/1:20,0:20:18.95:19,0,53	./.	1/1:32,0:32:14.78:97,15,0	1/1:32,0:31:17.77:118,18,0	0/0:22,0:22:0:0,0,0	0/0:34,0:34:18.57:0,19,773	0/0:36,0:36:22.26:0,22,539	0/0:35,3:38:3.76:0,4,565	1/1:34,0:34:18.52:113,19,0	1/1:45,0:45:29.03:187,29,0	1/1:22,0:22:4.79:26,5,0	1/1:27,0:26:8.93:63,9,0	1/1:21,0:21:5.95:42,6,0	1/1:23,0:22:2.98:21,3,0	./.	0/0:30,0:30:26.85:0,27,300	0/0:25,0:25:18.03:0,18,275	0/1:45,2:49:7.45:7,0,1015	0/0:27,0:27:23.76:0,24,335	1/1:27,0:27:11.89:83,12,0	1/1:34,0:33:11.90:84,12,0	1/1:11,0:11:5.94:41,6,0
chr10	14385730	.	ATGATGATGATGTTGT	A	5183.23	PASS	AB=1.000;AC=26;AF=0.464;AN=56;BaseQRankSum=16.290;DP=730;FS=10.678;HRun=0;HaplotypeScore=296.7890;InbreedingCoeff=0.6993;MQ=55.24;MQ0=7;MQRankSum=-5.040;QD=13.32;ReadPosRankSum=-1.460;VQSLOD=1.7968;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:23:66.14:0,66,2313	1/1:9,0:9:7.31:166,7,0	0/0:20,0:17:47.74:0,48,877	0/0:14,0:12:36.12:0,36,724	1/1:13,1:14:20.85:156,21,0	0/0:32,0:32:46.02:0,46,1722	0/0:17,0:17:29.88:0,30,958	1/1:25,0:24:25.36:284,25,0	0/1:30,0:30:0.09:300,0,0	1/1:38,0:38:65.01:835,65,0	0/0:11,0:11:0.47:0,0,1	0/0:41,0:41:99:0,117,5003	0/0:35,0:35:66.77:0,67,2754	0/0:31,0:31:87.30:0,87,3597	1/1:30,2:32:21.07:560,21,0	1/1:41,1:42:29.88:720,30,0	0/1:18,0:18:11.62:113,0,12	0/1:35,0:34:21.65:213,0,22	0/1:19,0:19:24.07:398,0,24	1/1:16,0:15:20.43:167,20,0	1/1:30,0:29:21.21:190,21,0	0/0:27,0:26:75.26:0,75,3016	0/0:20,0:20:57.18:0,57,1871	0/0:49,0:49:99:0,128,6150	0/0:20,0:20:57.16:0,57,2145	1/1:42,0:41:42.71:725,43,0	1/1:30,0:30:12.21:268,12,0	1/1:9,0:8:5.99:89,6,0
chr10	14385733	.	ATGATGATGTTGT	A	7494.79	PASS	AB=0.536;AC=28;AF=0.500;AN=56;BaseQRankSum=16.726;DP=741;FS=8.570;HRun=0;HaplotypeScore=260.6317;InbreedingCoeff=0.8342;MQ=55.43;MQ0=7;MQRankSum=-5.155;QD=18.97;ReadPosRankSum=-1.283;VQSLOD=2.1759;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:24:66.16:0,66,1925	1/1:8,2:10:10.33:252,10,0	0/0:22,0:18:50.96:0,51,945	0/0:16,0:15:42.61:0,43,826	1/1:13,1:14:20.85:156,21,0	0/0:33,0:33:35.17:0,35,1128	0/0:16,0:16:28.25:0,28,659	1/1:28,0:27:48.90:361,49,0	0/1:2,29:31:0.08:532,0,0	1/1:1,40:41:95.51:1227,96,0	0/0:0,11:11:0.47:0,0,1	0/0:41,0:41:99:0,120,4211	0/0:34,0:34:64.51:0,65,2050	0/0:32,0:32:90.31:0,90,3039	1/1:2,31:33:21.07:713,21,0	1/1:3,37:40:29.89:1088,30,0	1/1:1,16:17:8.99:229,9,0	0/1:7,28:34:21.17:345,0,21	1/1:19,2:21:52.89:593,53,0	1/1:1,14:14:20.43:215,20,0	1/1:32,0:31:24.20:214,24,0	0/0:28,0:27:78.27:0,78,2465	0/0:21,0:21:60.12:0,60,1588	0/0:46,0:46:99:0,128,5073	0/0:20,0:20:54.18:0,54,1798	1/1:2,38:39:87.18:964,87,0	1/1:0,30:30:11.44:451,11,0	1/1:1,7:7:6.02:154,6,0
chr10	14385739	.	ATGT	A	1645.27	PASS	AB=0.996;AC=30;AF=0.536;AN=56;BaseQRankSum=6.558;DP=780;FS=2.710;HRun=0;HaplotypeScore=194.9745;InbreedingCoeff=0.5310;MQ=56.94;MQ0=7;MQRankSum=-4.747;QD=3.47;ReadPosRankSum=0.404;VQSLOD=2.8283;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:24:40.38:0,40,582	0/1:10,0:10:13.33:13,0,18	0/0:28,0:24:68.12:0,68,708	0/0:26,0:24:66.49:0,66,650	0/1:14,0:14:0.20:0,0,0	1/1:13,22:35:5.95:63,6,0	1/1:19,0:19:44.96:406,45,0	1/1:34,0:33:0.52:2,1,0	1/1:31,0:31:14.61:97,15,0	1/1:41,0:41:17.74:118,18,0	0/1:11,0:11:0:0,0,0	0/0:44,0:44:99:0,100,1352	0/1:39,1:40:99:532,0,136	0/0:35,0:35:75.28:0,75,1026	1/1:33,0:33:18.52:113,19,0	1/1:38,0:38:28.94:187,29,0	1/1:17,0:17:5.26:27,5,0	0/1:33,0:32:9.09:51,0,9	1/1:25,0:25:5.92:43,6,0	1/1:15,0:14:2.98:21,3,0	0/0:31,0:30:0.66:0,1,2	0/0:28,0:27:56.91:0,57,588	0/0:21,0:21:53.96:0,54,579	0/0:49,0:49:78.88:0,79,1633	0/0:19,0:19:47.93:0,48,590	0/1:39,0:39:9.74:52,0,10	1/1:30,0:30:11.90:84,12,0	1/1:8,0:7:2.98:21,3,0
chr10	14387983	.	AG	A	14153.95	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=13.150;DP=748;FS=1.881;HRun=3;HaplotypeScore=76.8071;InbreedingCoeff=0.9919;MQ=86.10;MQ0=0;MQRankSum=-3.301;QD=33.86;ReadPosRankSum=3.934;VQSLOD=5.4651;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,141,2021	1/1:1,5:6:9.03:112,9,0	0/0:31,0:31:84.28:0,84,1190	0/0:31,0:31:89.62:0,90,1197	1/1:0,26:26:69.22:855,69,0	0/0:20,0:20:60.20:0,60,863	0/0:27,0:27:78.25:0,78,1095	1/1:2,37:39:99:1328,108,0	1/1:0,24:24:69.22:856,69,0	1/1:0,30:30:81.25:1004,81,0	1/1:0,13:13:33.10:409,33,0	0/0:30,0:30:84.27:0,84,1190	0/0:28,0:28:81.27:0,81,1167	0/0:35,0:35:99:0,102,1446	1/1:1,26:27:75.24:930,75,0	1/1:1,28:29:84.26:1042,84,0	1/1:2,28:30:78.24:967,78,0	1/1:0,26:26:75.24:930,75,0	1/1:2,23:25:69.17:815,69,0	1/1:1,20:21:54.17:669,54,0	1/1:1,57:58:99:2046,166,0	0/0:18,0:18:54.16:0,54,740	0/0:23,0:23:66.22:0,66,945	0/0:21,0:21:63.21:0,63,906	0/0:19,0:19:57.19:0,57,819	1/1:0,20:20:60.19:742,60,0	1/1:1,28:28:75.24:930,75,0	1/1:1,14:15:42.13:521,42,0
chr10	14388947	.	G	GGCACCAACACT	42221.18	PASS	AB=0.667;AC=35;AF=0.625;AN=56;BaseQRankSum=-2.198;DP=567;FS=6.301;HRun=0;HaplotypeScore=175.8042;InbreedingCoeff=0.9126;MQ=64.85;MQ0=2;MQRankSum=-17.673;QD=121.67;ReadPosRankSum=-1.202;VQSLOD=4.8830;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:46:99:0,132,4551	0/1:4,4:8:83:1053,0,83	0/0:16,0:16:42.14:0,42,1415	0/0:18,0:18:28.37:0,28,1573	1/1:9,14:26:57.20:2625,57,0	1/1:6,15:27:60.21:3002,60,0	1/1:11,8:19:57.20:2461,57,0	1/1:24,4:28:75.24:3549,75,0	1/1:8,17:28:72.25:3680,72,0	1/1:11,13:26:69.24:3276,69,0	1/1:5,4:9:27.09:1094,27,0	0/0:15,0:15:39.13:0,39,1392	0/0:21,0:21:60.19:0,60,2023	0/0:17,0:17:51.18:0,51,1717	1/1:3,9:14:36.12:1769,36,0	1/1:9,16:27:72.25:3609,72,0	1/1:12,8:22:49.72:2480,50,0	1/1:5,8:16:33.11:1798,33,0	1/1:13,6:19:48.13:2173,48,0	1/1:3,5:9:24.08:938,24,0	1/1:4,2:7:9.03:518,9,0	0/0:25,0:25:62.52:0,63,2144	0/0:15,0:15:45.15:0,45,1573	0/0:25,0:25:72.22:0,72,2381	0/0:21,0:21:60.18:0,60,1917	1/1:9,11:22:63.16:2926,63,0	1/1:11,18:31:84.29:4455,84,0	1/1:2,3:5:15.05:816,15,0
chr10	14398527	.	AATCGTGTTCTGTC	A	4252.48	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.701;DP=833;FS=2.131;HRun=0;HaplotypeScore=297.0687;InbreedingCoeff=0.9999;MQ=85.03;MQ0=0;MQRankSum=-10.077;QD=88.59;ReadPosRankSum=0.186;VQSLOD=4.4056;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,105,6432	0/0:14,0:14:39.11:0,39,2187	0/0:29,0:29:84.27:0,84,4206	0/0:25,0:25:75.26:0,75,3872	0/0:33,0:33:99:0,99,6180	1/1:2,21:23:54.19:2105,54,0	1/1:3,22:25:54.19:2148,54,0	0/0:39,0:39:99:0,102,5058	0/0:18,0:18:51.16:0,51,2744	0/0:40,0:40:99:0,114,6958	0/0:31,0:31:90.31:0,90,5448	0/0:38,0:38:99:0,111,7176	0/0:41,0:41:99:0,123,7335	0/0:34,0:34:99:0,102,6623	0/0:36,0:36:99:0,105,6632	0/0:31,0:31:93.32:0,93,5711	0/0:26,0:26:78.27:0,78,4620	0/0:28,0:28:81.28:0,81,4799	0/0:29,0:29:87.27:0,87,4871	0/0:34,0:34:96.33:0,96,5936	0/0:32,0:32:93.32:0,93,5669	0/0:38,0:37:99:0,114,6801	0/0:15,0:15:45.15:0,45,2822	0/0:31,0:30:87.28:0,87,5291	0/0:28,0:28:84.29:0,84,5443	0/0:39,0:39:99:0,114,6843	0/0:26,0:26:78.25:0,78,4616	0/0:14,0:14:42.14:0,42,2721
chr10	14399689	.	A	AT	1839.41	PASS	AB=0.983;AC=18;AF=0.321;AN=56;BaseQRankSum=-0.199;DP=664;FS=3.436;HRun=2;HaplotypeScore=122.5053;InbreedingCoeff=0.7983;MQ=64.25;MQ0=13;MQRankSum=-0.051;QD=6.05;ReadPosRankSum=-0.032;VQSLOD=0.6550;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:18,1:18:44.26:272,44,0	0/0:4,0:5:8.68:0,9,67	0/1:72,0:22:7.48:7,0,122	0/1:81,0:31:25.31:25,0,170	0/0:25,0:26:58.84:0,59,572	0/0:27,0:27:62.81:0,63,501	0/0:15,0:15:35.90:0,36,292	0/0:28,0:27:73.88:0,74,640	0/0:21,0:19:51.34:0,51,415	0/0:22,0:21:63.02:0,63,573	0/0:17,0:17:41.80:0,42,372	1/1:11,1:12:16.93:108,17,0	1/1:15,2:17:41.20:325,41,0	1/1:20,2:22:19.24:316,19,0	0/0:21,0:22:42.01:0,42,386	0/0:17,0:16:47.90:0,48,440	0/0:24,0:26:52.57:0,53,448	0/0:18,0:18:41.96:0,42,377	0/0:18,0:19:47.53:0,48,396	0/0:19,0:20:53.86:0,54,460	0/0:8,0:9:22.69:0,23,175	1/1:18,0:18:3.13:178,3,0	1/1:7,0:7:9.70:72,10,0	1/1:17,0:17:27.50:163,27,0	1/1:30,2:32:63.24:572,63,0	0/0:28,0:28:68.86:0,69,613	0/0:22,0:23:47.52:0,48,409	0/0:15,0:16:44.97:0,45,392
chr10	14399691	.	TA	T	1464.02	PASS	AB=0.776;AC=32;AF=0.571;AN=56;BaseQRankSum=-2.779;DP=661;FS=0.447;HRun=18;HaplotypeScore=112.5775;InbreedingCoeff=-0.0291;MQ=61.73;MQ0=13;MQRankSum=0.481;QD=3.25;ReadPosRankSum=1.569;VQSLOD=-0.1440;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,1:18:5.43:0,5,98	1/1:1,5:6:8.44:44,8,0	0/0:75,0:19:9.04:0,9,73	0/0:85,1:30:21.74:0,22,133	0/1:13,10:26:35.71:122,0,36	1/1:2,0:26:38.45:108,38,0	1/1:3,0:15:18.29:51,18,0	0/1:21,6:27:39.92:40,0,46	1/1:9,7:19:12.07:103,12,0	0/1:10,11:21:14.55:93,0,15	1/1:6,7:16:3.79:89,4,0	0/0:10,2:12:20.17:0,20,123	0/0:15,2:17:8.47:0,8,93	0/1:19,1:21:6.70:7,0,134	1/1:4,14:20:32.73:165,33,0	0/1:7,9:17:34.99:85,0,35	1/1:12,13:27:15.15:120,15,0	1/1:3,14:18:21.81:139,22,0	0/1:11,4:17:17.84:67,0,18	0/1:11,6:21:39.79:43,0,40	0/1:8,1:9:10.98:11,0,12	0/1:15,1:17:47.77:48,0,75	0/1:6,1:7:2.24:2,0,41	0/1:13,3:16:12.01:12,0,71	0/1:29,0:32:17.93:18,0,126	0/1:13,14:27:31.46:108,0,31	0/1:13,7:22:21.02:63,0,21	1/1:13,4:17:20.94:104,21,0
chr10	14408951	.	GAA	G	2602.84	PASS	AB=0.765;AC=36;AF=0.643;AN=56;BaseQRankSum=-3.001;DP=529;FS=8.550;HRun=16;HaplotypeScore=72.8797;InbreedingCoeff=0.4319;MQ=56.71;MQ0=15;MQRankSum=-0.214;QD=6.26;ReadPosRankSum=2.302;VQSLOD=-0.3365;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:33,2:44:11.08:11,0,249	1/1:2,3:5:11.93:96,12,0	0/0:15,0:4:5.92:0,6,40	0/1:11,0:6:5.11:5,0,71	1/1:6,16:25:2.25:187,2,0	1/1:2,0:24:45.14:191,45,0	1/1:5,0:15:13.67:58,14,0	0/1:11,13:24:17.19:149,0,17	1/1:5,8:13:16.45:140,16,0	1/1:11,11:22:32.28:285,32,0	1/1:5,5:8:8.86:113,9,0	0/0:12,0:21:14.99:0,15,82	0/0:12,0:13:15.04:0,15,63	0/0:12,1:13:24.76:0,25,169	0/1:8,10:19:12.15:114,0,12	1/1:8,6:14:8.78:180,9,0	1/1:12,20:34:40.97:351,41,0	1/1:12,17:28:19.79:236,20,0	1/1:8,13:18:29.43:229,29,0	1/1:5,2:7:4.33:66,4,0	1/1:4,5:7:2.97:25,3,0	0/0:7,0:15:16.95:0,17,109	0/0:7,0:18:16.53:0,17,66	0/1:14,1:15:47.63:48,0,50	0/0:12,0:14:23.60:0,24,147	1/1:10,9:19:12.29:103,12,0	1/1:19,4:22:5.88:150,6,0	0/1:7,7:15:20.94:58,0,21
chr10	14410971	.	T	TA	2035.87	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-5.679;DP=459;FS=2.135;HRun=12;HaplotypeScore=47.8011;InbreedingCoeff=0.9433;MQ=61.38;MQ0=11;MQRankSum=-0.807;QD=15.91;ReadPosRankSum=1.414;VQSLOD=4.5705;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,27:31:53.21:679,53,0	0/0:9,0:9:23.86:0,24,175	0/0:19,0:8:22.94:0,23,135	0/0:17,0:4:6.34:0,6,39	0/0:15,0:16:37.60:0,38,258	0/0:17,0:16:11.74:0,12,215	0/0:24,0:24:41.73:0,42,398	0/0:19,0:21:48.74:0,49,336	0/0:13,0:13:29.79:0,30,219	0/0:12,0:12:32.81:0,33,241	0/0:14,0:15:28.84:0,29,199	1/1:8,3:10:19.85:179,20,0	1/1:5,7:12:15.02:146,15,0	1/1:8,5:15:32.25:256,32,0	0/0:13,0:13:20.85:0,21,153	0/0:8,0:8:17.87:0,18,131	0/0:36,0:37:69.35:0,69,525	0/0:24,0:26:60.65:0,61,424	0/0:12,0:15:32.93:0,33,213	0/0:8,0:7:14.88:0,15,109	0/0:8,0:10:12.71:0,13,71	1/1:2,6:8:15.02:146,15,0	1/1:3,8:11:18.02:175,18,0	1/1:4,16:20:36.06:350,36,0	1/1:6,14:20:32.97:309,33,0	0/0:15,1:15:6.60:0,7,210	0/0:21,1:23:23.32:0,23,315	0/0:11,0:11:17.86:0,18,131
chr10	14411071	.	GA	G	6656.23	PASS	AB=0.591;AC=46;AF=0.821;AN=56;BaseQRankSum=5.004;DP=496;FS=0.598;HRun=11;HaplotypeScore=48.0141;InbreedingCoeff=0.6399;MQ=60.88;MQ0=14;MQRankSum=-0.757;QD=14.92;ReadPosRankSum=2.833;VQSLOD=5.1634;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,42:48:73.81:739,74,0	1/1:0,7:7:17.94:142,18,0	0/0:4,0:4:2.17:0,2,27	0/0:4,0:4:8.74:0,9,55	1/1:3,14:16:23.92:196,24,0	0/0:16,0:16:39.08:0,39,405	0/0:24,1:25:22.79:0,23,634	1/1:6,17:21:41.91:344,42,0	1/1:3,14:16:26.89:215,27,0	1/1:6,8:14:17.94:148,18,0	0/1:3,7:10:11.05:120,0,11	1/1:4,14:18:35.94:296,36,0	1/1:1,15:15:35.92:290,36,0	1/1:4,11:14:20.97:172,21,0	1/1:1,14:15:35.92:290,36,0	1/1:4,17:20:35.88:288,36,0	1/1:4,44:46:99:879,108,0	0/1:7,15:20:4.70:297,0,5	1/1:4,14:17:38.89:315,39,0	1/1:2,7:8:17.89:140,18,0	1/1:3,9:10:11.97:98,12,0	1/1:1,15:16:41.79:327,42,0	1/1:3,10:12:17.93:142,18,0	1/1:4,16:20:6.97:264,7,0	1/1:2,11:13:17.90:140,18,0	1/1:4,10:14:35.74:284,36,0	1/1:1,16:17:38.94:320,39,0	1/1:3,18:21:0.92:209,1,0
chr10	14412230	.	T	TC	9665.28	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-6.703;DP=585;FS=21.359;HRun=8;HaplotypeScore=73.7336;InbreedingCoeff=0.8608;MQ=72.18;MQ0=5;MQRankSum=-5.318;QD=19.45;ReadPosRankSum=5.667;VQSLOD=3.5140;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,19:24:42.12:485,42,0	1/1:5,1:5:3.01:35,3,0	0/0:36,0:29:16.38:0,16,372	0/0:51,0:33:39.25:0,39,425	1/1:1,8:9:15.03:163,15,0	1/1:16,0:16:17.67:109,18,0	1/1:20,0:20:23.19:136,23,0	1/1:6,14:19:36.07:392,36,0	1/1:7,11:18:20.98:224,21,0	1/1:7,20:27:54.14:609,54,0	1/1:3,6:8:11.95:120,12,0	1/1:7,18:25:26.49:341,26,0	1/1:2,17:19:30.09:346,30,0	1/1:3,25:27:60.18:692,60,0	1/1:3,20:23:39.10:437,39,0	1/1:3,19:22:39.12:450,39,0	1/1:4,26:30:57.17:657,57,0	1/1:1,19:20:45.13:519,45,0	1/1:4,10:14:30.06:330,30,0	1/1:2,11:13:18.01:193,18,0	1/1:9,21:30:54.58:608,55,0	1/1:3,11:14:27.07:312,27,0	1/1:0,10:10:18.05:206,18,0	1/1:5,20:25:54.13:622,54,0	1/1:1,13:14:21.06:242,21,0	1/1:1,18:19:48.11:531,48,0	1/1:3,28:31:68.23:768,68,0	1/1:0,9:7:12.04:138,12,0
chr10	14412237	.	C	CCCTCT	1212.98	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=-5.925;DP=604;FS=4.597;HRun=0;HaplotypeScore=149.7868;InbreedingCoeff=0.2409;MQ=75.87;MQ0=5;MQRankSum=0.143;QD=8.25;ReadPosRankSum=-5.622;VQSLOD=0.5974;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:46.86:0,47,299	0/0:5,0:4:2.92:0,3,17	0/0:40,0:33:48.41:0,48,848	0/0:48,0:30:38.95:0,39,887	0/0:12,0:12:20.38:0,20,153	1/1:3,10:20:18.06:493,18,0	1/1:1,14:20:24.07:596,24,0	0/1:23,0:22:99:125,0,149	0/0:15,0:15:21.85:0,22,192	0/1:24,0:24:4.99:5,0,359	0/0:9,0:8:1.23:0,1,130	0/0:23,0:22:35.26:0,35,255	0/0:21,0:21:1.18:0,1,211	0/0:28,0:27:50.51:0,51,356	0/1:23,0:23:16.58:17,0,241	0/0:23,0:23:44.49:0,44,273	0/0:34,0:35:29.75:0,30,491	0/0:21,0:21:49.84:0,50,319	0/1:14,0:14:83.62:84,0,162	0/0:14,0:14:13.55:0,14,167	0/0:26,0:26:2.12:0,2,244	0/0:15,0:15:29.74:0,30,171	0/0:11,0:11:17.55:0,18,101	0/0:24,0:24:30.91:0,31,391	0/0:17,0:17:29.47:0,29,215	0/1:23,0:23:38.85:39,0,250	0/0:31,0:30:63.02:0,63,409	0/0:11,0:9:14.71:0,15,114
chr10	14412449	.	T	TG	506.81	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-2.767;DP=510;FS=0.812;HRun=2;HaplotypeScore=100.0460;InbreedingCoeff=0.9067;MQ=67.23;MQ0=2;MQRankSum=1.197;QD=17.48;ReadPosRankSum=-0.715;VQSLOD=3.5112;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:69.99:0,70,897	0/0:8,0:8:23.90:0,24,188	0/0:18,0:12:8.50:0,9,137	0/0:15,0:8:9.82:0,10,109	0/0:17,0:17:31.83:0,32,248	1/1:2,14:16:23.64:335,24,0	1/1:4,9:13:22.43:292,22,0	0/0:21,0:21:25.18:0,25,410	0/0:21,0:21:59.67:0,60,467	0/0:32,0:32:81.78:0,82,749	0/0:19,0:19:44.87:0,45,369	0/0:16,0:16:41.63:0,42,446	0/0:13,0:13:30:0,30,309	0/0:13,0:13:36.08:0,36,395	0/0:22,0:22:65.78:0,66,531	0/0:10,0:10:23.94:0,24,194	0/0:24,0:24:59.47:0,59,473	0/0:22,0:22:65.88:0,66,559	0/0:10,0:10:29.97:0,30,272	0/0:23,0:22:48.36:0,48,419	0/0:3,0:3:8.92:0,9,67	0/0:10,0:10:27.06:0,27,297	0/0:8,0:8:17.97:0,18,182	0/0:14,0:14:30.01:0,30,315	0/0:30,0:30:74.55:0,75,869	0/0:28,0:27:75.52:0,76,618	0/0:24,0:24:68.85:0,69,577	0/0:23,0:21:53.97:0,54,476
chr10	14412451	.	GT	G	3587.62	PASS	AB=0.698;AC=26;AF=0.464;AN=56;BaseQRankSum=0.709;DP=517;FS=5.260;HRun=13;HaplotypeScore=89.1703;InbreedingCoeff=0.3673;MQ=67.14;MQ0=2;MQRankSum=-6.337;QD=11.21;ReadPosRankSum=1.328;VQSLOD=3.4746;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,1:36:61.96:0,62,721	1/1:2,5:8:16.95:115,17,0	0/0:15,1:10:8.96:0,9,73	0/0:18,0:10:10.58:0,11,63	0/1:11,5:18:24.72:140,0,25	0/0:17,0:17:32.27:0,32,199	0/0:14,0:14:32.27:0,32,203	0/1:12,6:19:23.54:129,0,24	1/1:8,13:21:44.70:328,45,0	0/1:18,11:31:9.74:245,0,10	1/1:9,9:18:10.13:214,10,0	0/0:14,0:16:38.88:0,39,354	0/0:14,1:15:15.39:0,15,249	0/0:12,1:13:5.12:0,5,206	1/1:4,15:22:50.82:346,51,0	1/1:3,7:10:12.15:176,12,0	1/1:8,16:24:44.72:328,45,0	0/1:11,12:24:2.73:294,0,3	0/1:7,4:11:36.79:70,0,37	1/1:14,8:23:20.45:298,20,0	1/1:1,2:3:2.95:22,3,0	0/0:10,0:10:24.04:0,24,233	0/1:8,1:9:10.77:11,0,99	0/0:11,2:13:2.08:0,2,173	0/0:25,1:28:47.95:0,48,662	1/1:15,16:30:1.97:314,2,0	0/1:7,17:24:4.71:296,0,5	0/1:5,17:21:8.60:262,0,9
chr10	14412493	.	CT	C	8023.24	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-4.561;DP=484;FS=12.406;HRun=10;HaplotypeScore=86.0229;InbreedingCoeff=0.8975;MQ=70.66;MQ0=1;MQRankSum=-4.148;QD=19.62;ReadPosRankSum=3.281;VQSLOD=4.9002;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,28:35:83.87:716,84,0	1/1:1,8:9:23.99:208,24,0	0/0:31,0:20:41.95:0,42,370	0/0:23,0:16:4.54:0,5,136	1/1:7,16:23:53.92:460,54,0	0/0:14,0:14:36.06:0,36,374	0/0:7,0:7:18.03:0,18,189	1/1:5,26:31:74.90:642,75,0	1/1:7,12:19:38.86:334,39,0	1/1:7,20:26:62.96:546,63,0	1/1:4,7:11:20.95:182,21,0	1/1:3,6:9:14.98:130,15,0	1/1:1,6:7:18:156,18,0	1/1:4,3:7:11.95:103,12,0	1/1:3,16:19:47.98:416,48,0	1/1:3,14:17:47.97:412,48,0	1/1:5,21:26:62.98:545,63,0	1/1:4,17:21:56.98:494,57,0	1/1:5,14:19:47.92:401,48,0	1/1:4,12:16:38.96:332,39,0	1/1:0,4:4:9:78,9,0	1/1:3,6:9:11.93:97,12,0	1/1:0,4:4:9:78,9,0	1/1:0,8:8:14.88:130,15,0	1/1:8,22:30:71.89:616,72,0	1/1:4,19:22:53.98:466,54,0	1/1:9,10:19:32.93:285,33,0	1/1:10,6:14:23.87:194,24,0
chr10	14418032	.	AAAGAAAGG	A	6088.04	PASS	AB=0.977;AC=35;AF=0.625;AN=56;BaseQRankSum=-3.010;DP=562;FS=7.319;HRun=0;HaplotypeScore=239.5909;InbreedingCoeff=-0.3602;MQ=39.07;MQ0=9;MQRankSum=1.936;QD=11.01;ReadPosRankSum=-2.753;VQSLOD=2.5328;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:12,0:11:32.29:112,0,32	0/1:13,0:13:55.29:101,0,55	0/0:4,0:2:6.02:0,6,102	0/0:5,0:1:3.01:0,3,81	0/1:37,0:33:99:352,0,543	0/1:11,0:8:19.16:87,0,19	1/1:22,0:16:5.04:167,5,0	0/1:14,27:41:99:591,0,184	0/1:16,0:14:12.22:126,0,12	0/1:39,0:35:99:389,0,805	0/1:34,0:29:99:242,0,436	1/1:13,0:9:17.72:119,18,0	1/1:17,0:16:34.25:331,34,0	1/1:16,0:16:36.03:272,36,0	0/1:31,0:29:99:116,0,644	0/1:25,0:24:85.10:278,0,85	0/1:8,0:7:13.21:63,0,13	0/1:14,0:12:26.11:123,0,26	0/1:17,0:17:39.95:305,0,40	0/1:37,0:34:99:288,0,135	1/1:7,0:6:14.93:127,15,0	1/1:17,0:15:29.37:241,29,0	1/1:20,0:20:44.72:385,45,0	1/1:5,0:5:14.55:114,15,0	1/1:18,0:17:35.15:302,35,0	0/1:39,0:35:99:399,0,739	0/1:23,0:20:99:176,0,312	0/1:21,0:21:99:283,0,124
chr10	14418105	.	CAGAGAGAGAGAGAGAGAG	C	274.89	PASS	AB=0.926;AC=14;AF=0.250;AN=56;BaseQRankSum=1.227;DP=495;FS=6.978;HRun=0;HaplotypeScore=221.4764;InbreedingCoeff=0.5106;MQ=60.95;MQ0=24;MQRankSum=-0.576;QD=1.92;ReadPosRankSum=1.506;VQSLOD=1.8838;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:9,8:16:3.01:56,3,0	0/0:8,0:11:21.07:0,21,536	0/1:47,0:13:0:0,0,0	0/0:65,0:15:5.05:0,5,50	0/0:17,0:17:12.02:0,12,258	0/0:15,0:13:21.07:0,21,516	0/0:10,0:9:9.03:0,9,178	0/0:30,0:30:12.04:0,12,183	0/0:8,0:8:3.01:0,3,49	0/0:24,0:27:39:0,39,922	0/0:10,0:10:3.01:0,3,50	0/1:7,5:12:7.30:133,0,7	1/1:9,0:8:2.94:18,3,0	1/1:11,0:11:9.82:70,10,0	0/0:18,0:20:19.41:0,19,425	0/0:18,0:18:24.04:0,24,421	0/0:12,0:12:15.05:0,15,316	0/0:13,0:13:18.02:0,18,432	0/0:16,0:14:21.06:0,21,408	0/0:12,0:12:11.93:0,12,199	0/0:20,0:19:20.53:0,21,402	0/1:10,0:10:7.41:7,0,17	1/1:16,0:16:2.68:11,3,0	1/1:9,0:8:8.99:97,9,0	0/1:12,0:12:2.14:30,0,2	0/0:20,0:20:21.07:0,21,504	0/0:14,0:15:14.64:0,15,396	0/0:12,0:12:9.92:0,10,277
chr10	14419591	.	CTT	C	343.01	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=3.170;DP=410;FS=14.080;HRun=17;HaplotypeScore=56.9979;InbreedingCoeff=0.7497;MQ=65.05;MQ0=15;MQRankSum=2.711;QD=9.03;ReadPosRankSum=6.639;VQSLOD=-0.1797;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:17:32.71:0,33,236	0/0:9,0:8:15.23:0,15,124	0/0:20,0:12:24:0,24,229	0/0:12,0:10:7.88:0,8,85	0/0:18,0:18:39.33:0,39,346	1/1:5,8:14:23.07:165,23,0	1/1:6,18:24:32.48:298,32,0	0/0:23,0:20:19.94:0,20,134	0/0:11,0:15:18.32:0,18,130	0/0:8,0:15:33.03:0,33,338	0/0:10,0:9:23.84:0,24,204	0/0:12,0:12:29.82:0,30,232	0/0:8,0:8:5.98:0,6,56	0/0:13,0:12:17.53:0,18,105	0/0:11,0:10:8.94:0,9,68	0/0:9,0:9:11.86:0,12,80	0/0:11,0:24:27.30:0,27,213	0/0:22,0:17:35.20:0,35,281	0/0:15,0:15:17.99:0,18,160	0/0:10,0:9:11.92:0,12,101	0/0:11,0:11:14.92:0,15,134	0/0:10,0:10:12.62:0,13,101	0/0:11,0:11:23.83:0,24,189	0/0:9,0:9:5.98:0,6,57	0/0:16,0:15:36.94:0,37,273	0/0:16,0:14:31.26:0,31,274	0/0:23,0:21:26.85:0,27,224	0/0:2,0:9:6.01:0,6,65
chr10	14422989	.	CGATA	C	5800.41	PASS	AB=0.897;AC=43;AF=0.827;AN=52;BaseQRankSum=7.854;DP=693;FS=17.059;HRun=0;HaplotypeScore=119.0413;InbreedingCoeff=0.5735;MQ=69.22;MQ0=2;MQRankSum=0.353;QD=10.55;ReadPosRankSum=-0.867;VQSLOD=2.9758;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:41,1:42:0.70:1,0,862	1/1:7,0:7:3:25,3,0	./.	./.	1/1:17,11:28:18.06:275,18,0	1/1:11,0:22:9.01:83,9,0	0/1:24,0:22:1.01:1,0,33	0/0:34,0:34:0:0,0,0	1/1:10,0:25:6.01:55,6,0	1/1:22,15:37:42.07:553,42,0	1/1:7,2:9:6.02:92,6,0	1/1:10,16:27:33.10:486,33,0	0/0:34,0:34:45.14:0,45,931	0/0:33,0:33:54.17:0,54,1183	1/1:17,17:34:30.10:459,30,0	1/1:16,7:23:13.60:187,14,0	1/1:12,13:25:24.08:367,24,0	1/1:6,11:17:18.06:272,18,0	1/1:19,8:26:24.07:345,24,0	1/1:16,7:23:12.04:183,12,0	0/1:18,12:30:3.19:211,0,3	1/1:13,8:21:15.05:229,15,0	1/1:15,2:17:21.04:274,21,0	1/1:13,8:21:6.02:92,6,0	1/1:6,10:17:12.03:165,12,0	1/1:14,20:34:57.18:848,57,0	1/1:14,8:22:18.06:275,18,0	1/1:8,10:18:21.07:321,21,0
chr10	14424698	.	CATACAT	C	5993.83	PASS	AB=0.914;AC=37;AF=0.661;AN=56;BaseQRankSum=-6.947;DP=453;FS=13.290;HRun=0;HaplotypeScore=102.5464;InbreedingCoeff=-0.1810;MQ=51.05;MQ0=19;MQRankSum=0.285;QD=14.00;ReadPosRankSum=5.256;VQSLOD=2.7749;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:6,37:41:0:0,0,0	0/1:6,0:6:5.89:138,0,6	1/1:12,0:3:2.99:23,3,0	0/1:7,0:5:3.52:4,0,87	1/1:9,1:10:2.98:25,3,0	0/1:18,0:18:83.11:83,0,135	0/1:26,0:24:99:169,0,181	1/1:9,10:14:29.99:433,30,0	0/1:15,0:15:19.63:439,0,20	1/1:2,10:11:29.05:388,29,0	0/0:3,5:7:0.47:0,0,1	1/1:19,0:16:33.07:463,33,0	1/1:18,0:16:15.19:415,15,0	1/1:16,0:15:8.30:276,8,0	0/1:23,1:24:55.91:274,0,56	0/1:16,1:17:26.49:365,0,26	0/1:18,0:18:38.06:304,0,38	0/1:15,1:16:52.84:421,0,53	1/1:15,0:12:9.08:324,9,0	1/1:7,0:7:2.97:50,3,0	0/1:30,0:29:2.55:563,0,3	0/0:3,14:16:1.41:0,1,2	0/1:1,7:8:0:0,0,0	1/1:39,0:37:11.97:147,12,0	0/1:6,0:5:7.41:80,0,7	1/1:5,11:16:9.36:407,9,0	0/1:6,0:6:5.88:110,0,6	0/1:3,1:3:9.24:94,0,9
chr10	14424702	.	CAT	C	2996.29	PASS	AB=1.000;AC=30;AF=0.600;AN=50;BaseQRankSum=-4.690;DP=458;FS=13.835;HRun=0;HaplotypeScore=99.5447;InbreedingCoeff=-0.2640;MQ=51.31;MQ0=19;MQRankSum=0.580;QD=8.21;ReadPosRankSum=3.865;VQSLOD=2.3499;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/1:6,0:6:5.94:63,0,6	./.	0/1:6,0:4:1.28:1,0,20	./.	0/1:18,0:18:99:191,0,137	0/1:27,0:25:99:268,0,131	1/1:19,0:13:23.81:187,24,0	0/1:14,0:14:26.59:182,0,27	1/1:14,0:13:16.87:183,17,0	0/0:9,0:8:2.94:0,3,19	1/1:13,4:14:26.95:220,27,0	1/1:19,1:18:16.67:205,17,0	1/1:16,2:17:16.95:246,17,0	0/1:25,0:25:96.25:105,0,96	0/1:18,0:18:33.29:168,0,33	0/1:18,0:18:38.23:144,0,38	0/1:15,0:15:56.13:169,0,56	1/1:15,0:13:2.79:141,3,0	1/1:8,0:8:2.96:25,3,0	0/1:30,0:29:27.07:234,0,27	0/0:17,0:16:0:0,0,1	0/0:7,0:7:0:0,0,0	1/1:7,36:40:9.02:105,9,0	0/1:6,0:5:7.42:55,0,7	0/1:18,0:17:7.03:162,0,7	0/1:6,0:6:5.99:52,0,6	0/1:4,0:3:9.43:29,0,9
chr10	14424744	.	CACACAT	C	4272.07	PASS	AB=0.964;AC=37;AF=0.661;AN=56;BaseQRankSum=-1.704;DP=559;FS=10.025;HRun=0;HaplotypeScore=122.7401;InbreedingCoeff=0.0601;MQ=56.92;MQ0=25;MQRankSum=2.385;QD=9.62;ReadPosRankSum=-0.754;VQSLOD=3.1331;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:40,0:39:23.21:184,0,23	1/1:4,0:4:4.24:28,4,0	0/0:35,0:20:60.02:0,60,586	0/0:39,0:16:44.70:0,45,377	0/0:13,1:14:0:0,0,0	0/1:19,0:19:6.09:6,0,415	0/0:27,0:25:31.49:0,31,501	1/1:32,0:29:37.72:570,38,0	0/1:12,0:12:46.05:179,0,46	1/1:15,0:15:38.75:297,39,0	1/1:9,0:8:8.68:58,9,0	1/1:13,0:10:15.27:116,15,0	0/1:14,0:12:41.35:80,0,41	0/1:19,0:18:47.91:96,0,48	1/1:23,1:23:30.98:339,31,0	1/1:17,1:18:3.44:232,3,0	0/1:24,0:23:12.44:227,0,12	0/1:14,1:15:1.08:217,0,1	1/1:25,0:22:23.94:348,24,0	1/1:12,0:12:15.87:126,16,0	1/1:44,0:42:36.40:388,36,0	1/1:13,0:12:8.99:74,9,0	1/1:7,0:7:11.91:92,12,0	1/1:38,0:35:3.58:153,4,0	0/1:11,0:10:47.83:90,0,48	0/1:22,0:21:45.16:212,0,45	0/1:12,0:12:7.89:111,0,8	0/1:1,1:2:28.06:48,0,28
chr10	14424746	.	CACAT	C	6234.27	PASS	AB=0.760;AC=46;AF=0.821;AN=56;BaseQRankSum=1.415;DP=551;FS=8.816;HRun=0;HaplotypeScore=100.3977;InbreedingCoeff=0.7531;MQ=59.08;MQ0=24;MQRankSum=-0.259;QD=14.46;ReadPosRankSum=2.432;VQSLOD=3.6753;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:40,0:39:8.15:192,0,8	1/1:5,0:5:6.01:63,6,0	0/0:37,0:22:66.03:0,66,643	0/0:39,0:16:44.70:0,45,377	0/1:1,12:13:0:0,0,0	0/0:18,0:18:19.46:0,19,211	0/0:26,0:25:44.49:0,44,340	1/1:31,0:29:72.79:612,73,0	1/1:12,0:12:33.75:323,34,0	1/1:15,0:15:44.47:356,44,0	1/1:9,0:8:12:124,12,0	1/1:12,0:9:17.89:140,18,0	1/1:13,0:11:12.93:82,13,0	1/1:17,0:16:13.96:103,14,0	1/1:24,0:23:56.92:595,57,0	1/1:17,1:18:39.96:413,40,0	1/1:23,0:22:55.42:490,55,0	1/1:16,0:16:43.16:435,43,0	1/1:6,19:22:55.65:486,56,0	1/1:8,4:12:17.98:163,18,0	1/1:44,0:42:73.49:654,73,0	1/1:11,0:10:8.99:74,9,0	1/1:7,0:7:11.91:92,12,0	1/1:37,0:34:19.52:170,20,0	1/1:11,0:10:7.88:92,8,0	1/1:21,0:20:40.63:355,41,0	1/1:13,0:13:22.64:163,23,0	1/1:2,0:2:5.23:58,5,0
chr10	14424748	.	CAT	C	5605.96	PASS	AB=1.000;AC=43;AF=0.796;AN=54;BaseQRankSum=0.232;DP=551;FS=6.293;HRun=0;HaplotypeScore=89.0746;InbreedingCoeff=0.6460;MQ=62.99;MQ0=22;MQRankSum=-0.319;QD=13.57;ReadPosRankSum=2.483;VQSLOD=4.0532;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:38,0:38:4.33:189,0,4	1/1:5,0:5:4.81:30,5,0	0/0:39,0:24:72:0,72,689	0/0:41,0:18:47.69:0,48,400	./.	0/0:18,0:18:44.05:0,44,433	0/0:27,0:26:52.03:0,52,534	1/1:29,0:28:71.26:610,71,0	1/1:11,1:12:10.97:186,11,0	1/1:15,0:15:44.80:371,45,0	1/1:10,0:9:14.91:117,15,0	1/1:12,0:9:17.89:140,18,0	1/1:13,0:11:2.35:90,2,0	1/1:17,0:16:16.55:241,17,0	1/1:24,1:24:52.29:407,52,0	1/1:17,2:19:43.71:359,44,0	1/1:23,0:22:36.41:328,36,0	1/1:16,1:17:39.18:314,39,0	1/1:24,1:22:56.18:443,56,0	1/1:12,0:12:17.94:143,18,0	1/1:45,0:43:70.57:534,71,0	1/1:12,0:11:11.98:99,12,0	1/1:8,0:8:14.91:116,15,0	1/1:33,0:30:30.45:274,30,0	0/1:11,0:10:0.31:118,0,0	1/1:17,0:16:31.22:297,31,0	1/1:13,0:13:12.71:177,13,0	0/1:2,0:2:14.72:24,0,15
chr10	14426473	.	A	AG	1005.39	PASS	AB=0.981;AC=50;AF=0.893;AN=56;BaseQRankSum=0.055;DP=302;FS=12.063;HRun=3;HaplotypeScore=146.8431;InbreedingCoeff=0.1500;MQ=65.96;MQ0=0;MQRankSum=-3.653;QD=3.40;ReadPosRankSum=-0.602;VQSLOD=-0.7088;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:12:7.86:18,8,0	1/1:8,0:8:10.69:56,11,0	0/0:6,0:6:10.87:0,11,63	0/1:11,1:12:10.40:10,0,167	1/1:15,1:16:5.25:99,5,0	1/1:9,0:9:7.81:18,8,0	1/1:13,0:13:3.91:44,4,0	1/1:11,0:11:29.98:176,30,0	1/1:6,0:6:4.73:11,5,0	1/1:11,0:11:12.47:45,12,0	1/1:3,0:3:1.41:3,1,0	1/1:20,0:20:14.85:65,15,0	1/1:8,0:8:6.66:16,7,0	1/1:11,0:11:5.76:13,6,0	1/1:12,1:13:12.04:71,12,0	1/1:18,0:18:0.44:49,0,0	1/1:9,0:9:8.98:37,9,0	1/1:3,0:3:5.41:15,5,0	1/1:12,0:12:10.45:40,10,0	0/1:18,0:18:3.64:72,0,4	1/1:10,0:10:5.60:21,6,0	1/1:11,0:11:8.38:48,8,0	0/1:12,0:12:12.58:42,0,13	1/1:11,0:10:5.31:40,5,0	0/1:10,0:10:4.01:35,0,4	1/1:10,1:11:5.41:49,5,0	1/1:15,0:15:10.48:31,10,0	1/1:1,0:1:0.47:1,0,0
chr10	14427571	.	TTG	T	19640.40	PASS	AB=1.000;AC=49;AF=0.875;AN=56;BaseQRankSum=5.968;DP=612;FS=27.439;HRun=0;HaplotypeScore=81.5698;InbreedingCoeff=0.8809;MQ=76.76;MQ0=2;MQRankSum=-4.546;QD=35.97;ReadPosRankSum=2.984;VQSLOD=4.0174;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,23:25:58.14:866,58,0	1/1:0,8:8:18.06:269,18,0	0/1:20,0:19:4.24:4,0,520	0/0:20,1:19:24.40:0,24,437	1/1:0,37:37:99:1532,111,0	0/0:25,0:25:75.17:0,75,1252	0/0:20,0:20:57.18:0,57,984	1/1:0,37:37:99:1569,108,0	1/1:0,18:18:44.82:672,45,0	1/1:1,29:29:84.25:1197,84,0	1/1:0,34:34:99:1320,102,0	1/1:1,16:17:39.13:582,39,0	1/1:0,21:21:50.70:760,51,0	1/1:0,9:8:21.07:314,21,0	1/1:0,24:24:57.19:851,57,0	1/1:0,22:22:51.17:760,51,0	1/1:0,21:21:54.18:806,54,0	1/1:0,26:26:57.19:851,57,0	1/1:0,18:18:51.17:734,51,0	1/1:0,34:34:96.22:1353,96,0	1/1:0,23:23:54.18:806,54,0	1/1:0,15:15:42.01:552,42,0	1/1:1,17:18:39.13:582,39,0	1/1:1,18:19:48.16:717,48,0	1/1:0,14:14:30.10:448,30,0	1/1:0,25:25:75.22:1059,75,0	1/1:0,19:19:42.14:627,42,0	1/1:1,11:12:29.31:410,29,0
chr10	14427572	.	TG	T	8044.32	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=9.368;DP=606;FS=23.767;HRun=1;HaplotypeScore=111.4562;InbreedingCoeff=0.9947;MQ=76.82;MQ0=2;MQRankSum=-3.575;QD=15.38;ReadPosRankSum=3.165;VQSLOD=3.5793;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:24:56.58:345,57,0	1/1:8,0:8:17.55:104,18,0	0/0:19,1:19:26.20:0,26,462	0/0:18,1:17:23.13:0,23,358	1/1:37,0:37:99:653,108,0	0/0:25,0:25:75.17:0,75,1010	0/0:19,0:19:57.18:0,57,795	1/1:37,0:37:99:644,106,0	1/1:18,0:18:43.87:260,44,0	1/1:29,1:29:82.13:511,82,0	1/1:34,0:34:99:606,100,0	1/1:16,0:16:38.02:225,38,0	1/1:21,0:21:49.09:296,49,0	1/1:9,0:8:20.47:121,20,0	1/1:24,0:24:55.57:329,56,0	1/1:22,0:22:49.69:294,50,0	1/1:21,0:21:52.64:312,53,0	1/1:26,0:26:55.58:330,56,0	1/1:18,0:18:49.88:322,50,0	1/1:34,0:34:93.43:559,93,0	1/1:23,0:23:52.64:312,53,0	1/1:15,0:15:41.07:250,41,0	1/1:17,0:17:38.02:225,38,0	1/1:18,0:18:46.81:278,47,0	1/1:14,0:14:29.24:173,29,0	1/1:25,0:25:73.21:456,73,0	1/1:19,0:19:40.94:243,41,0	1/1:11,1:12:29.33:198,29,0
chr10	14428964	.	C	CTTT	3658.35	PASS	AB=0.700;AC=40;AF=0.714;AN=56;BaseQRankSum=-0.754;DP=587;FS=3.010;HRun=16;HaplotypeScore=116.1673;InbreedingCoeff=0.3080;MQ=71.94;MQ0=2;MQRankSum=-0.407;QD=7.16;ReadPosRankSum=-3.134;VQSLOD=-0.2765;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:12,0:31:29.02:65,0,29	1/1:3,2:9:16.93:166,17,0	0/0:23,0:11:1.79:0,2,44	0/1:21,0:10:0.80:1,0,7	0/1:12,0:28:7.66:284,0,8	0/0:6,0:20:34.81:0,35,214	0/0:5,0:13:25.86:0,26,147	1/1:15,1:31:47.30:375,47,0	1/1:5,0:16:19.18:152,19,0	1/1:9,1:27:38.33:310,38,0	1/1:7,1:21:24.63:200,25,0	0/1:8,0:23:23.61:24,0,40	0/0:9,0:19:6.89:0,7,76	0/1:11,0:16:1.43:57,0,1	1/1:9,0:25:31:262,31,0	0/1:10,0:22:29.54:123,0,30	1/1:4,0:21:15.98:100,16,0	1/1:5,5:17:1.46:203,1,0	1/1:3,1:14:22.01:184,22,0	1/1:8,0:22:35.27:260,35,0	0/1:10,0:22:26.20:58,0,26	1/1:6,0:20:12.50:47,12,0	0/1:7,0:17:2.59:3,0,44	1/1:8,0:14:2.49:6,2,0	1/1:6,0:21:7.97:34,8,0	1/1:15,0:31:18.14:304,18,0	1/1:5,0:21:30.41:205,30,0	1/1:2,1:17:26.70:235,27,0
chr10	14431811	.	TTC	T	1172.07	PASS	AB=0.985;AC=25;AF=0.446;AN=56;BaseQRankSum=8.387;DP=516;FS=5.535;HRun=0;HaplotypeScore=92.2578;InbreedingCoeff=-0.6371;MQ=60.06;MQ0=8;MQRankSum=-0.519;QD=2.54;ReadPosRankSum=9.432;VQSLOD=-0.0709;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:32:90.75:91,0,94	1/1:6,0:6:7.30:23,7,0	0/0:14,0:10:17.03:0,17,191	0/0:12,0:9:18.02:0,18,192	0/1:22,1:20:55.85:56,0,125	0/0:14,0:14:8.96:0,9,57	0/0:14,0:14:7.29:0,7,79	0/1:26,1:25:25.39:25,0,106	0/1:13,0:13:45.76:55,0,46	0/1:21,0:21:5.35:5,0,82	0/1:19,1:20:58.29:58,0,100	0/1:15,0:15:17.12:96,0,17	0/1:16,1:16:50.53:113,0,51	0/1:15,0:15:48.40:76,0,48	0/1:23,0:23:74.70:77,0,75	0/1:20,0:20:45.80:53,0,46	0/1:21,0:20:51.19:51,0,59	0/1:23,0:22:30.77:109,0,31	0/1:25,0:23:17.33:17,0,132	0/1:15,1:16:34.98:35,0,45	0/1:4,0:4:0.82:10,0,1	0/1:14,0:13:43.18:64,0,43	0/1:17,1:18:72.82:73,0,79	0/1:11,0:11:24.48:41,0,24	0/1:23,0:23:35.12:43,0,35	0/1:30,0:30:24.73:25,0,107	0/1:17,1:18:69.86:96,0,70	0/1:26,0:25:34.67:35,0,115
chr10	14431813	.	CTT	C	7715.69	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-6.340;DP=512;FS=5.531;HRun=14;HaplotypeScore=70.7352;InbreedingCoeff=0.8871;MQ=56.77;MQ0=13;MQRankSum=0.864;QD=15.78;ReadPosRankSum=1.885;VQSLOD=4.0721;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,23:32:59.82:602,60,0	1/1:1,5:6:14.96:129,15,0	0/0:12,0:8:10.26:0,10,101	0/0:10,0:8:14.70:0,15,123	1/1:12,11:20:32.97:305,33,0	1/1:1,1:13:33.19:158,33,0	1/1:4,1:14:22.18:110,22,0	1/1:9,17:25:38.79:407,39,0	1/1:5,9:14:20.81:241,21,0	1/1:5,14:19:41.96:381,42,0	1/1:6,11:20:21.95:276,22,0	1/1:3,10:15:32:288,32,0	1/1:6,10:16:20.71:239,21,0	1/1:4,11:15:23.81:222,24,0	1/1:6,15:22:29.80:324,30,0	1/1:3,15:19:26.55:296,27,0	1/1:5,15:20:23.73:316,24,0	1/1:3,17:21:35.78:427,36,0	1/1:7,15:22:38.44:376,38,0	1/1:3,11:16:14.32:232,14,0	1/1:0,4:4:8.86:83,9,0	1/1:5,9:14:16.78:245,17,0	1/1:6,9:17:11.61:251,12,0	1/1:3,8:11:21.01:194,21,0	1/1:3,17:22:38.61:392,39,0	1/1:6,22:31:44.59:590,45,0	1/1:8,10:18:29.36:260,29,0	1/1:7,16:25:29.70:371,30,0
chr10	14432591	.	TTCTCC	T	8430.17	PASS	AB=1.000;AC=41;AF=0.759;AN=54;BaseQRankSum=0.011;DP=408;FS=7.140;HRun=0;HaplotypeScore=80.8086;InbreedingCoeff=0.5297;MQ=76.52;MQ0=1;MQRankSum=-5.497;QD=27.11;ReadPosRankSum=3.338;VQSLOD=3.9613;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:27:38.27:53,0,38	1/1:0,5:5:6.02:137,6,0	0/0:25,0:15:32.88:0,33,615	0/0:22,0:16:43.92:0,44,773	1/1:0,5:19:34.90:595,35,0	0/0:16,0:16:25.64:0,26,500	0/0:15,0:16:48.16:0,48,818	1/1:0,19:22:63.21:1054,63,0	1/1:0,10:11:24.08:530,24,0	1/1:1,9:10:24.08:407,24,0	1/1:0,4:6:15.05:329,15,0	0/1:14,0:13:10.72:11,0,28	1/1:11,0:8:0.12:39,0,0	0/0:10,0:6:3.92:0,4,23	1/1:0,13:15:36.08:772,36,0	1/1:0,12:14:30.06:654,30,0	1/1:1,22:26:41.37:804,41,0	1/1:0,9:10:13.84:266,14,0	1/1:0,10:10:27.05:362,27,0	1/1:0,12:13:33.11:641,33,0	1/1:0,9:9:3.01:69,3,0	0/1:18,0:16:46.91:47,0,55	1/1:9,0:8:2.32:14,2,0	1/1:29,0:28:30.40:243,30,0	./.	1/1:1,3:13:39.13:688,39,0	1/1:0,11:13:30.06:646,30,0	1/1:0,6:6:3.01:69,3,0
chr10	14432592	.	TCTC	T	4656.68	PASS	AB=0.889;AC=47;AF=0.870;AN=54;BaseQRankSum=5.386;DP=406;FS=0.694;HRun=0;HaplotypeScore=84.0589;InbreedingCoeff=0.6305;MQ=76.40;MQ0=2;MQRankSum=-6.033;QD=13.94;ReadPosRankSum=2.309;VQSLOD=4.5028;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,22:25:11.81:76,12,0	1/1:5,0:5:5.99:48,6,0	0/0:26,0:16:26.02:0,26,347	0/0:23,0:15:18.67:0,19,367	1/1:19,0:19:44.39:345,44,0	0/1:14,1:16:23.76:24,0,176	0/0:16,0:16:29.78:0,30,320	1/1:22,0:22:62.68:469,63,0	1/1:11,0:11:23.95:198,24,0	1/1:10,0:10:23.73:168,24,0	1/1:6,0:6:14.97:121,15,0	1/1:0,12:13:21.03:311,21,0	1/1:0,9:8:12.04:189,12,0	1/1:1,8:6:5.97:69,6,0	1/1:15,0:15:35.95:308,36,0	1/1:14,0:14:29.88:236,30,0	1/1:25,0:26:36.85:298,37,0	1/1:10,0:10:11.94:91,12,0	1/1:10,0:10:22.58:146,23,0	1/1:13,0:13:32.80:253,33,0	1/1:9,0:9:3:25,3,0	1/1:0,16:15:17.99:252,18,0	1/1:1,0:7:2.59:35,3,0	1/1:0,0:28:35.87:412,36,0	./.	1/1:14,0:14:41.78:318,42,0	1/1:13,0:13:29.91:241,30,0	1/1:6,0:6:3:25,3,0
chr10	14432594	.	TC	T	987.55	PASS	AC=50;AF=0.926;AN=54;BaseQRankSum=2.065;DP=403;FS=0.000;HRun=14;HaplotypeScore=86.9913;InbreedingCoeff=0.5371;MQ=75.49;MQ0=3;MQRankSum=-4.838;QD=2.85;ReadPosRankSum=3.522;VQSLOD=-0.1352;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:24:4.61:26,5,0	1/1:5,0:5:4.44:13,4,0	0/0:27,0:15:14.38:0,14,90	0/0:22,0:16:9.80:0,10,91	1/1:19,0:19:26.89:104,27,0	1/1:6,8:15:13.02:67,13,0	1/1:13,0:16:19.87:98,20,0	1/1:22,0:22:8.84:28,9,0	1/1:11,0:11:17.58:54,18,0	1/1:10,0:10:6.64:21,7,0	1/1:6,0:6:10.55:32,11,0	1/1:14,0:13:14.08:46,14,0	1/1:10,0:8:9.33:30,9,0	1/1:10,0:6:2.22:7,2,0	1/1:15,0:15:27:86,27,0	1/1:14,0:14:22:68,22,0	1/1:26,0:26:26.89:84,27,0	1/1:10,0:10:8.87:27,9,0	1/1:10,0:10:4.67:16,5,0	1/1:13,0:13:16.60:50,17,0	1/1:9,0:9:2.22:7,2,0	1/1:17,0:15:9.79:33,10,0	1/1:7,0:6:2.03:6,2,0	1/1:29,0:28:21.45:66,21,0	./.	1/1:14,0:14:16.08:59,16,0	1/1:13,0:13:22.57:72,23,0	1/1:6,0:6:2.22:7,2,0
chr10	14433395	.	ATT	A	10551.21	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-6.186;DP=553;FS=4.155;HRun=13;HaplotypeScore=75.2307;InbreedingCoeff=0.9818;MQ=69.42;MQ0=0;MQRankSum=-1.502;QD=19.95;ReadPosRankSum=4.517;VQSLOD=4.5495;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,21:24:48.03:466,48,0	1/1:2,13:17:32.71:352,33,0	0/0:14,0:14:17.21:0,17,173	0/0:10,0:7:16.90:0,17,129	1/1:6,14:21:38.72:361,39,0	1/1:4,19:24:59.79:565,60,0	1/1:3,10:15:32.50:285,32,0	1/1:9,14:23:41.97:399,42,0	1/1:2,11:13:36.03:343,36,0	1/1:6,19:27:50.67:527,51,0	1/1:6,20:27:56.73:535,57,0	1/1:7,15:22:42:407,42,0	1/1:3,12:16:26.95:311,27,0	1/1:2,9:13:26.71:290,27,0	1/1:7,24:31:58.34:579,58,0	1/1:4,12:17:23.11:331,23,0	1/1:1,26:28:77.85:739,78,0	1/1:1,8:9:21.03:204,21,0	1/1:5,13:20:29.66:323,30,0	1/1:4,16:21:41.71:390,42,0	1/1:4,14:19:38.78:361,39,0	1/1:4,14:18:41.17:406,41,0	1/1:2,17:20:41.79:456,42,0	1/1:1,11:12:33.04:320,33,0	1/1:7,14:24:22.07:341,22,0	1/1:7,18:26:47.35:447,47,0	1/1:6,9:16:26.71:244,27,0	1/1:4,20:26:42.73:568,43,0
chr10	14436055	.	C	CG	4938.44	PASS	AB=0.625;AC=51;AF=0.911;AN=56;BaseQRankSum=-7.517;DP=620;FS=32.805;HRun=0;HaplotypeScore=102.0881;InbreedingCoeff=0.5812;MQ=78.19;MQ0=2;MQRankSum=-1.788;QD=8.76;ReadPosRankSum=3.095;VQSLOD=2.9900;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:13,20:35:3.70:119,0,4	1/1:2,6:9:14.71:75,15,0	0/0:34,0:23:55.29:0,55,511	0/0:22,0:15:21.87:0,22,184	1/1:7,22:30:47.73:448,48,0	1/1:2,0:20:8.97:76,9,0	1/1:5,2:23:5.22:34,5,0	1/1:12,22:35:64.60:481,65,0	1/1:5,12:17:15.01:182,15,0	1/1:3,18:23:54.43:353,54,0	1/1:9,21:32:39.60:331,40,0	1/1:5,18:23:8.06:84,8,0	1/1:2,15:17:2.82:41,3,0	1/1:3,9:12:8.92:124,9,0	1/1:8,22:31:26.04:280,26,0	1/1:4,13:17:5.05:47,5,0	1/1:4,15:21:22.54:261,23,0	1/1:11,5:20:20.26:128,20,0	1/1:15,1:16:35.66:268,36,0	1/1:8,6:29:48.29:335,48,0	1/1:4,6:10:1.98:8,2,0	1/1:1,16:18:36.79:172,37,0	1/1:7,18:25:11.27:84,11,0	1/1:11,2:16:32:255,32,0	1/1:4,17:22:13.37:113,13,0	1/1:7,15:22:40.60:268,41,0	1/1:11,3:28:21.90:208,22,0	1/1:12,1:13:20.18:165,20,0
chr10	14436476	.	ATG	A	1860.28	PASS	AB=0.776;AC=30;AF=0.577;AN=52;BaseQRankSum=-4.585;DP=492;FS=43.854;HRun=0;HaplotypeScore=135.6705;InbreedingCoeff=0.2080;MQ=30.51;MQ0=27;MQRankSum=0.211;QD=5.20;ReadPosRankSum=3.925;VQSLOD=1.5468;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:12,13:24:0:0,0,1	1/1:10,4:14:2.04:6,2,0	0/0:14,0:6:9.03:0,9,141	0/0:18,0:7:15.02:0,15,197	0/1:10,6:16:0.03:0,0,0	1/1:9,0:8:3.21:13,3,0	0/0:8,0:5:0.89:0,1,2	0/1:18,2:13:0.97:173,0,1	0/0:12,4:14:2.80:0,3,13	0/1:7,16:23:8.94:324,0,9	0/0:4,5:9:0.27:0,0,0	0/1:13,3:15:6.02:17,0,6	0/1:9,7:16:22.59:23,0,26	0/1:16,2:15:1.56:2,0,25	./.	0/0:12,7:19:0.45:0,0,1	1/1:12,4:16:6.01:62,6,0	1/1:7,8:15:15.52:185,16,0	0/1:11,5:14:2.59:180,0,3	0/1:10,6:13:0:0,0,0	./.	0/1:19,1:19:11.92:15,0,12	1/1:17,3:18:2.74:20,3,0	1/1:34,5:38:10.86:59,11,0	1/1:3,3:6:2.04:6,2,0	1/1:14,17:28:33.03:584,33,0	1/1:9,2:10:2.07:26,2,0	1/1:5,6:11:28.10:296,28,0
chr10	14436478	.	G	GTA	1123.92	PASS	AB=0.992;AC=29;AF=0.518;AN=56;BaseQRankSum=-3.984;DP=500;FS=28.969;HRun=0;HaplotypeScore=154.5859;InbreedingCoeff=-0.0227;MQ=30.32;MQ0=28;MQRankSum=0.354;QD=2.80;ReadPosRankSum=0.962;VQSLOD=1.2671;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:20,1:20:0.47:2,0,0	0/0:13,0:13:1.90:0,2,14	0/0:15,0:7:9.03:0,9,137	0/0:19,0:7:15.02:0,15,195	0/1:16,0:17:0.01:0,0,0	0/1:9,0:8:9.67:21,0,10	0/0:8,0:5:0.89:0,1,5	0/1:23,0:15:68.43:68,0,85	0/0:19,0:17:7.85:0,8,42	0/1:23,0:23:54.16:143,0,54	1/1:9,0:9:2.04:6,2,0	1/1:16,0:16:7.39:59,7,0	0/1:15,0:15:4.65:27,0,5	0/1:17,1:15:32.22:92,0,32	1/1:13,0:13:2.24:4,2,0	0/0:19,0:19:0.37:0,0,14	1/1:16,0:16:3.54:18,4,0	0/1:13,0:13:18.34:63,0,18	0/1:17,0:15:48.31:48,0,76	0/1:17,0:14:0:0,0,0	0/1:38,0:34:0:0,0,0	0/1:18,1:18:5.30:30,0,5	1/1:20,0:18:2.81:21,3,0	1/1:38,1:38:17.33:252,17,0	0/0:6,0:6:2.34:0,2,13	0/1:33,0:30:77.22:246,0,77	0/1:12,0:11:30.68:31,0,31	1/1:12,0:12:5.28:133,5,0
chr10	14436482	.	G	GCC	308.70	PASS	AB=0.993;AC=27;AF=0.482;AN=56;BaseQRankSum=8.518;DP=499;FS=23.557;HRun=0;HaplotypeScore=151.4436;InbreedingCoeff=0.1902;MQ=30.02;MQ0=29;MQRankSum=-2.036;QD=1.17;ReadPosRankSum=-3.028;VQSLOD=0.5999;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:20:5.80:33,6,0	1/1:12,1:13:3.24:19,3,0	0/0:15,0:7:12.04:0,12,187	0/0:19,0:7:21.07:0,21,317	0/0:16,0:17:0:0,0,0	1/1:9,0:8:17.83:94,18,0	1/1:9,0:5:5.63:40,6,0	0/1:26,0:17:45.89:46,0,260	1/1:18,0:16:2.43:13,2,0	0/0:23,0:23:4.88:0,5,341	1/1:9,0:9:2.04:6,2,0	0/1:19,0:17:12.04:25,0,12	0/0:14,0:14:2.98:0,3,181	0/0:16,1:14:1.97:0,2,58	0/1:16,0:16:7.68:41,0,8	1/1:18,0:18:4.78:55,5,0	0/1:16,0:16:21.26:21,0,40	0/0:13,0:13:17.11:0,17,114	0/1:15,0:12:12.79:13,0,226	1/1:18,0:15:1.44:4,1,0	0/0:37,0:34:1.55:0,2,4	0/1:18,1:18:1.04:1,0,33	1/1:19,0:17:0.61:1,1,0	0/0:35,1:35:5.40:0,5,113	1/1:6,1:7:3.28:16,3,0	0/0:33,0:30:11.04:0,11,569	0/1:11,0:10:32.07:34,0,32	0/0:12,0:12:4:0,4,174
chr10	14436484	.	G	GCT	1954.55	PASS	AB=0.981;AC=38;AF=0.679;AN=56;BaseQRankSum=8.835;DP=558;FS=57.752;HRun=0;HaplotypeScore=237.0002;InbreedingCoeff=-0.0935;MQ=29.75;MQ0=28;MQRankSum=-2.178;QD=3.84;ReadPosRankSum=-4.739;VQSLOD=0.5485;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:19:6.49:77,6,0	1/1:14,1:15:9.69:85,10,0	0/0:16,0:8:12.04:0,12,190	0/0:19,0:7:21.07:0,21,318	1/1:20,0:21:8.77:37,9,0	1/1:10,0:9:20.40:249,20,0	1/1:11,0:7:2.25:103,2,0	0/1:38,0:28:99:257,0,213	1/1:19,0:17:11.31:94,11,0	0/1:27,0:27:99:131,0,321	1/1:10,0:10:7.91:41,8,0	0/1:19,0:18:32.43:42,0,32	0/1:15,0:15:24.26:24,0,143	0/1:16,1:14:22.75:36,0,23	1/1:20,0:20:16.91:171,17,0	1/1:24,0:24:23.62:197,24,0	0/1:16,0:16:31.85:32,0,42	0/0:13,0:13:17.39:0,17,115	0/1:17,0:16:95.63:96,0,196	1/1:18,0:16:3.91:22,4,0	1/1:39,0:36:0.31:13,0,0	0/1:18,1:18:16.50:87,0,17	1/1:22,0:20:10.30:52,10,0	0/1:34,1:34:17.50:17,0,106	1/1:8,1:9:5.58:62,6,0	0/1:40,0:37:99:110,0,500	0/1:13,0:12:30.18:74,0,30	0/1:13,0:13:16.06:16,0,168
chr10	14436486	.	GTA	G	789.87	PASS	AB=0.937;AC=14;AF=0.259;AN=54;BaseQRankSum=-5.942;DP=565;FS=0.968;HRun=0;HaplotypeScore=138.5713;InbreedingCoeff=-0.1496;MQ=29.47;MQ0=29;MQRankSum=0.750;QD=3.10;ReadPosRankSum=6.392;VQSLOD=2.2617;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:19:5.54:0,6,28	0/0:13,2:15:8.20:0,8,37	0/1:13,3:8:12.99:13,0,172	0/0:20,0:7:20.90:0,21,292	0/0:20,2:22:2.92:0,3,18	0/0:10,0:9:11.95:0,12,67	0/0:11,0:7:9.48:0,9,38	0/0:43,0:33:0.82:0,1,401	0/0:18,2:18:5.93:0,6,50	0/1:30,0:30:99:115,0,184	0/0:11,0:11:3.21:0,3,17	0/1:21,0:19:36.98:37,0,58	0/0:15,0:15:4.50:0,5,41	0/0:15,0:12:8.80:0,9,63	0/0:17,2:19:11.33:0,11,49	0/0:21,2:23:16.39:0,16,86	1/1:12,4:16:0.99:53,1,0	1/1:12,0:12:17.50:102,18,0	0/1:18,1:15:77.37:77,0,99	0/0:14,4:16:2.92:0,3,17	./.	0/1:20,0:19:18.90:19,0,66	0/1:22,0:20:25.92:31,0,26	0/1:34,0:33:9.68:53,0,10	0/0:9,0:9:3.79:0,4,21	0/1:39,0:36:99:189,0,169	0/1:10,3:12:33.83:34,0,49	0/1:9,4:13:20.55:214,0,21
chr10	14442432	.	T	TGTG	31924.56	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-9.086;DP=719;FS=0.610;HRun=0;HaplotypeScore=87.6274;InbreedingCoeff=0.9573;MQ=56.84;MQ0=1;MQRankSum=-1.456;QD=47.79;ReadPosRankSum=5.592;VQSLOD=6.3338;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,29:34:57.20:1238,57,0	1/1:1,13:14:33.11:735,33,0	0/0:25,0:19:51.08:0,51,737	0/0:26,0:25:65.55:0,66,860	1/1:4,14:19:27.09:599,27,0	1/1:0,11:11:18.06:390,18,0	1/1:3,32:35:84.29:1873,84,0	1/1:3,18:22:54.14:1117,54,0	1/1:3,27:30:78.27:1740,78,0	1/1:4,17:22:54.15:1084,54,0	1/1:1,8:10:9.03:198,9,0	1/1:2,36:42:99:2340,106,0	1/1:4,21:25:48.16:1047,48,0	1/1:2,34:36:90.31:1989,90,0	1/1:4,32:38:81.28:1803,81,0	1/1:0,37:38:90.31:2009,90,0	1/1:3,32:37:78.27:1710,78,0	1/1:0,25:24:69.24:1531,69,0	1/1:2,17:19:44.97:972,45,0	1/1:1,13:14:33.11:705,33,0	1/1:5,49:54:99:2189,99,0	1/1:3,12:15:24.08:498,24,0	1/1:2,8:12:15.05:334,15,0	1/1:1,34:37:90.31:2008,90,0	1/1:2,20:22:48.16:1051,48,0	1/1:2,13:15:33.09:654,33,0	1/1:2,22:25:63.22:1398,63,0	1/1:1,13:15:33.11:713,33,0
chr10	14443770	.	GGTTTGGTTTGA	G	10267.22	PASS	AB=1.000;AC=35;AF=0.625;AN=56;BaseQRankSum=6.772;DP=691;FS=2.368;HRun=0;HaplotypeScore=177.9784;InbreedingCoeff=0.7286;MQ=60.36;MQ0=16;MQRankSum=2.365;QD=22.92;ReadPosRankSum=1.539;VQSLOD=3.8355;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:36,0:36:4.33:4,0,542	1/1:2,0:2:6.02:116,6,0	0/0:33,0:22:31.14:0,31,419	0/0:40,0:22:25.14:0,25,434	1/1:3,23:26:52.42:876,52,0	0/0:22,0:22:57.19:0,57,1552	0/0:21,0:21:60.17:0,60,1064	1/1:27,0:26:51.14:675,51,0	1/1:5,21:26:11.50:404,11,0	1/1:3,23:26:66.22:1335,66,0	1/1:1,7:8:13.28:251,13,0	0/0:32,0:32:36.52:0,37,473	0/0:24,0:24:21.10:0,21,204	0/0:18,0:18:20.91:0,21,271	1/1:4,29:33:14.17:507,14,0	1/1:1,31:32:22.11:667,22,0	1/1:6,22:27:9.03:249,9,0	1/1:18,0:18:19.03:720,19,0	1/1:10,19:24:57.12:849,57,0	1/1:4,14:17:33.11:516,33,0	1/1:3,26:29:2.13:40,2,0	0/1:27,0:27:99:391,0,248	0/1:17,0:17:99:135,0,362	0/0:32,0:32:42.05:0,42,655	0/0:21,0:21:21.61:0,22,339	1/1:5,21:25:60.20:1090,60,0	1/1:2,27:29:30.06:826,30,0	1/1:2,9:11:18.06:618,18,0
chr10	14443775	.	GGTTTGA	G	9158.87	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=6.876;DP=649;FS=1.187;HRun=0;HaplotypeScore=128.7865;InbreedingCoeff=0.8218;MQ=61.13;MQ0=16;MQRankSum=-3.178;QD=17.18;ReadPosRankSum=4.144;VQSLOD=4.2765;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,25:36:15.05:251,15,0	1/1:2,0:3:5.95:60,6,0	0/0:36,0:25:40.74:0,41,551	0/0:39,0:23:23.01:0,23,561	1/1:23,0:23:48.16:680,48,0	0/0:20,0:20:42.14:0,42,874	0/0:20,0:21:39.13:0,39,641	1/1:30,0:29:63.20:863,63,0	1/1:22,0:22:12.04:191,12,0	1/1:24,0:24:51.07:762,51,0	1/1:8,0:8:9.03:134,9,0	1/1:8,21:29:18.06:354,18,0	1/1:3,18:21:20.71:389,21,0	1/1:4,12:16:9.01:189,9,0	1/1:30,0:30:14.17:241,14,0	1/1:32,0:32:21.07:345,21,0	1/1:23,0:22:9.03:143,9,0	1/1:16,0:18:44.80:615,45,0	1/1:27,0:22:45.12:615,45,0	1/1:15,0:14:30.10:426,30,0	1/1:26,0:26:3.01:41,3,0	1/1:5,20:25:54.12:776,54,0	1/1:14,0:14:15.05:231,15,0	1/1:12,24:36:6.02:113,6,0	1/1:6,11:17:9.03:157,9,0	1/1:22,0:21:57.19:831,57,0	1/1:27,0:27:30.06:453,30,0	1/1:9,0:9:18.06:298,18,0
chr10	14443780	.	GA	G	5945.59	PASS	AB=0.908;AC=34;AF=0.607;AN=56;BaseQRankSum=11.186;DP=629;FS=5.628;HRun=1;HaplotypeScore=98.4685;InbreedingCoeff=0.0749;MQ=62.72;MQ0=10;MQRankSum=-2.386;QD=12.49;ReadPosRankSum=7.180;VQSLOD=3.4343;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:33:99:114,0,240	0/1:1,1:2:21.44:36,0,21	0/0:39,0:29:75.77:0,76,839	0/0:41,0:27:44.33:0,44,768	1/1:23,0:23:21.50:582,21,0	0/0:20,0:20:60.20:0,60,950	0/0:20,0:20:57.19:0,57,902	1/1:7,23:29:13.53:864,14,0	0/1:22,0:22:10.75:39,0,11	0/1:24,0:24:58.38:510,0,58	1/1:8,0:8:8.92:107,9,0	0/1:26,0:26:90.79:91,0,184	0/1:20,0:20:28.30:122,0,28	0/1:14,0:14:16.98:17,0,82	1/1:30,0:30:3.95:54,4,0	1/1:31,0:31:20.97:142,21,0	1/1:22,0:22:8.89:79,9,0	0/1:3,14:17:2.13:505,0,2	0/1:24,0:22:70.94:518,0,71	1/1:14,0:14:29.91:392,30,0	1/1:26,0:26:3.01:41,3,0	0/1:22,0:22:25.38:546,0,25	0/1:8,7:15:99:164,0,216	0/0:33,0:33:20.71:0,21,421	0/1:15,0:15:34.02:34,0,172	1/1:22,0:21:56.32:694,56,0	1/1:27,0:27:28.68:208,29,0	1/1:9,0:9:17.19:89,17,0
chr10	14445217	.	TTA	T	7568.12	PASS	AB=1.000;AC=47;AF=0.839;AN=56;BaseQRankSum=-0.050;DP=387;FS=5.656;HRun=0;HaplotypeScore=51.4347;InbreedingCoeff=0.4478;MQ=57.81;MQ0=11;MQRankSum=2.580;QD=21.62;ReadPosRankSum=4.067;VQSLOD=4.7310;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:36,1:36:20.98:197,21,0	1/1:0,5:5:9.03:119,9,0	0/0:20,0:5:8.81:0,9,79	0/0:15,0:4:8.98:0,9,87	1/1:1,15:15:38.42:452,38,0	1/1:1,11:12:30.10:395,30,0	1/1:0,8:8:18.06:239,18,0	1/1:0,25:25:72.03:816,72,0	1/1:0,3:3:9.03:119,9,0	1/1:1,11:12:33.06:390,33,0	1/1:4,8:10:23.44:278,23,0	1/1:14,0:13:28.02:116,28,0	0/1:8,0:8:3.08:58,0,3	1/1:7,0:7:18.19:120,18,0	1/1:4,6:10:14.99:178,15,0	1/1:1,13:14:23.99:309,24,0	1/1:4,24:27:56.16:720,56,0	1/1:5,17:21:29.22:573,29,0	1/1:1,19:20:53.98:599,54,0	1/1:0,6:6:12.04:159,12,0	1/1:0,5:5:6.02:80,6,0	0/0:2,0:2:0:0,0,0	0/1:5,0:5:10.57:11,0,11	1/1:11,0:11:5.58:114,6,0	0/1:11,0:9:21.34:56,0,21	1/1:3,20:23:65.95:742,66,0	1/1:3,21:24:37.45:491,37,0	1/1:1,11:12:18.03:238,18,0
chr10	14445218	.	TA	T	5928.48	PASS	AC=50;AF=0.926;AN=54;BaseQRankSum=0.334;DP=368;FS=3.738;HRun=2;HaplotypeScore=52.5829;InbreedingCoeff=0.7508;MQ=58.80;MQ0=8;MQRankSum=2.300;QD=17.54;ReadPosRankSum=2.539;VQSLOD=5.0981;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,31:33:72.16:891,72,0	1/1:5,0:5:8.83:54,9,0	0/0:18,0:6:8.64:0,9,72	0/0:12,0:5:8.98:0,9,77	1/1:16,0:15:38.28:247,38,0	1/1:11,0:12:29.36:176,29,0	1/1:8,0:8:17.65:107,18,0	1/1:25,0:25:65.74:431,66,0	1/1:3,0:3:8.81:53,9,0	1/1:12,0:12:32.47:209,32,0	1/1:9,3:10:23.42:155,23,0	1/1:3,10:12:33.09:408,33,0	1/1:3,5:8:21.05:254,21,0	1/1:4,3:7:19.58:199,20,0	1/1:6,0:8:14.10:74,14,0	1/1:13,1:14:23.52:143,24,0	1/1:25,0:25:55.67:333,56,0	1/1:18,0:20:46.95:290,47,0	1/1:19,0:20:55.80:381,56,0	1/1:6,0:6:11.77:71,12,0	1/1:5,0:5:5.88:36,6,0	./.	1/1:0,5:5:6.02:77,6,0	1/1:2,9:11:30:350,30,0	1/1:4,7:9:20.07:252,20,0	1/1:21,1:23:61.85:390,62,0	1/1:22,0:24:39.97:241,40,0	1/1:11,0:11:17.63:107,18,0
chr10	14447112	.	CT	C	1886.43	PASS	AB=0.719;AC=20;AF=0.357;AN=56;BaseQRankSum=5.846;DP=666;FS=0.000;HRun=14;HaplotypeScore=81.3794;InbreedingCoeff=0.7389;MQ=65.54;MQ0=5;MQRankSum=0.445;QD=7.83;ReadPosRankSum=2.412;VQSLOD=2.9631;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:22,19:41:6.48:448,6,0	0/1:11,3:14:25.66:26,0,201	0/0:37,0:17:13.41:0,13,147	0/0:19,0:10:1.85:0,2,57	0/0:19,0:19:31.19:0,31,266	1/1:1,0:19:22.41:65,22,0	1/1:5,1:19:23.11:79,23,0	0/0:40,0:40:64.77:0,65,583	0/0:23,1:24:23.74:0,24,410	0/0:28,1:28:45.04:0,45,521	0/0:19,0:19:38.25:0,38,336	1/1:12,6:19:12.53:119,13,0	1/1:12,6:19:10.90:194,11,0	1/1:5,14:20:12.76:224,13,0	0/0:29,0:29:56.82:0,57,531	0/0:22,1:25:34.20:0,34,441	0/0:35,0:37:63.23:0,63,668	0/0:25,1:26:9.23:0,9,322	0/0:18,2:20:24.04:0,24,330	0/0:17,0:20:47.51:0,48,402	0/0:18,0:18:29.66:0,30,298	1/1:6,18:25:53.48:369,53,0	1/1:6,8:16:18.68:114,19,0	1/1:6,19:25:2.90:277,3,0	0/1:9,14:24:17.70:174,0,18	0/0:32,1:34:27.22:0,27,374	0/0:15,0:15:10.53:0,11,226	0/0:9,0:9:21.39:0,21,171
chr10	14449336	.	TCTGCCC	T	946.52	PASS	AB=1.000;AC=29;AF=0.906;AN=32;BaseQRankSum=0.867;DP=168;FS=0.000;HRun=0;HaplotypeScore=26.7706;InbreedingCoeff=0.1182;MQ=34.00;MQ0=58;MQRankSum=0.000;QD=9.28;ReadPosRankSum=0.867;VQSLOD=0.4895;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:8,0:4:3.01:42,3,0	0/1:4,0:1:0:0,0,0	./.	./.	1/1:6,0:3:3.01:39,3,0	./.	0/0:8,0:6:3.48:0,3,54	./.	1/1:8,0:5:6.02:103,6,0	1/1:4,0:2:3.01:58,3,0	./.	1/1:4,4:8:2.98:51,3,0	1/1:1,1:2:6.02:117,6,0	1/1:7,0:4:6.02:121,6,0	./.	1/1:5,0:3:3.01:61,3,0	1/1:9,0:7:6.02:121,6,0	1/1:7,0:5:2.99:23,3,0	./.	./.	1/1:16,0:8:2.59:60,3,0	./.	./.	1/1:6,0:6:3.01:60,3,0	./.	1/1:7,0:5:3.01:54,3,0	1/1:5,0:3:6.02:121,6,0	./.
chr10	14449395	.	TTCTGCCTC	T	1054.29	PASS	AC=38;AF=0.905;AN=42;BaseQRankSum=-1.211;DP=218;FS=8.239;HRun=0;HaplotypeScore=50.1427;InbreedingCoeff=0.1778;MQ=52.10;MQ0=32;MQRankSum=-2.156;QD=6.17;ReadPosRankSum=1.742;VQSLOD=0.0953;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:15:2.92:17,3,0	./.	0/0:25,0:3:1.82:0,2,5	0/0:11,0:6:0.89:0,1,2	1/1:5,0:4:2.97:20,3,0	./.	1/1:10,0:10:9:80,9,0	1/1:6,7:11:14.84:106,15,0	1/1:8,0:8:2.97:20,3,0	1/1:7,0:6:8.95:83,9,0	1/1:6,0:5:0.44:1,0,0	1/1:5,0:5:5.61:45,6,0	1/1:7,0:7:5.98:74,6,0	1/1:10,0:10:3.01:61,3,0	1/1:5,0:5:3.01:53,3,0	./.	1/1:14,0:14:3.01:61,3,0	1/1:4,0:4:2.97:27,3,0	1/1:8,0:4:2.97:61,3,0	./.	1/1:21,0:18:17.53:143,18,0	./.	1/1:9,0:7:2.77:16,3,0	1/1:10,0:8:11.79:100,12,0	./.	1/1:4,0:3:9:81,9,0	1/1:7,0:7:6.02:84,6,0	./.
chr10	14449418	.	TCTCTGCCTCTCTGCCC	T	3907.85	PASS	AC=48;AF=1.000;AN=48;BaseQRankSum=0.014;DP=279;FS=0.000;HRun=0;HaplotypeScore=72.7680;InbreedingCoeff=-0.0665;MQ=48.83;MQ0=45;MQRankSum=2.287;QD=15.51;ReadPosRankSum=2.342;VQSLOD=0.8376;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:7,17:18:2.92:17,3,0	1/1:0,1:1:3.01:39,3,0	./.	./.	1/1:2,5:5:11.94:116,12,0	1/1:6,0:4:8.97:115,9,0	1/1:11,0:10:24.04:304,24,0	1/1:14,0:9:14.84:106,15,0	1/1:1,10:10:2.97:20,3,0	1/1:1,5:5:14.95:211,15,0	1/1:1,8:8:3.45:39,3,0	1/1:7,0:7:11.69:133,12,0	1/1:1,8:9:5.87:150,6,0	1/1:0,12:12:3.01:137,3,0	1/1:0,11:11:3.01:129,3,0	1/1:5,0:4:12.03:154,12,0	1/1:1,18:18:3.01:137,3,0	1/1:6,0:6:11.96:147,12,0	1/1:4,3:5:8.95:187,9,0	./.	1/1:25,0:19:36.13:447,36,0	1/1:2,6:7:5.17:74,5,0	1/1:2,10:10:2.64:16,3,0	1/1:19,0:16:25.93:422,26,0	1/1:5,0:4:12.04:183,12,0	1/1:9,0:8:21.05:337,21,0	1/1:0,9:9:11.93:290,12,0	./.
chr10	14451974	.	AGGGACC	A	27678.37	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=4.939;DP=672;FS=29.461;HRun=0;HaplotypeScore=182.9264;InbreedingCoeff=0.9704;MQ=75.98;MQ0=1;MQRankSum=-14.907;QD=48.39;ReadPosRankSum=6.873;VQSLOD=3.2637;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,36:43:78.18:1727,78,0	1/1:0,17:17:45.15:1047,45,0	0/0:23,0:23:66.23:0,66,2189	0/0:26,0:26:68.80:0,69,2314	1/1:2,22:24:30.10:693,30,0	0/0:20,0:20:60.21:0,60,2115	0/0:31,0:31:87.30:0,87,2936	1/1:4,23:27:66.23:1553,66,0	1/1:2,21:23:57.11:1244,57,0	1/1:2,23:25:66.21:1514,66,0	1/1:4,18:22:33.11:779,33,0	1/1:0,21:21:54.19:1276,54,0	1/1:2,13:15:30.10:696,30,0	1/1:3,14:17:39.05:819,39,0	1/1:3,19:22:45.15:1063,45,0	1/1:1,20:21:54.11:1175,54,0	1/1:2,27:29:60.13:1303,60,0	1/1:4,12:16:27.09:638,27,0	1/1:3,14:17:42.14:993,42,0	1/1:3,43:46:99:2481,105,0	1/1:2,7:9:6.01:128,6,0	1/1:0,21:21:36.12:851,36,0	1/1:0,26:26:60.07:1374,60,0	1/1:3,20:23:27.09:638,27,0	1/1:2,31:33:75.21:1720,75,0	1/1:2,25:27:72.25:1678,72,0	1/1:3,31:34:63.17:1438,63,0	1/1:0,13:13:36.12:851,36,0
chr10	14454015	.	C	CT	597.77	PASS	AB=0.974;AC=4;AF=0.071;AN=56;BaseQRankSum=4.166;DP=612;FS=2.778;HRun=10;HaplotypeScore=71.8257;InbreedingCoeff=0.5224;MQ=62.18;MQ0=8;MQRankSum=-1.610;QD=9.80;ReadPosRankSum=0.381;VQSLOD=2.7220;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,1:38:39.99:0,40,383	0/0:7,0:7:14.96:0,15,123	0/0:16,0:9:2.96:0,3,50	0/0:14,0:6:8.01:0,8,52	0/0:25,0:25:55.48:0,55,432	0/1:18,0:19:1.42:290,0,1	1/1:23,1:24:36.02:410,36,0	0/0:33,0:33:51.45:0,51,588	0/0:15,0:15:15.02:0,15,231	0/0:22,1:23:20.31:0,20,356	0/0:18,0:18:44.94:0,45,369	0/0:23,0:23:35.32:0,35,217	0/1:17,1:18:10.64:11,0,202	0/0:16,1:17:11.03:0,11,179	0/0:20,0:20:50.87:0,51,411	0/0:29,2:31:48.61:0,49,592	0/0:32,0:30:77.88:0,78,637	0/0:28,0:28:71.85:0,72,582	0/0:26,0:26:52.85:0,53,416	0/0:18,0:18:44.85:0,45,359	0/0:21,0:20:46.75:0,47,374	0/0:23,0:23:49.14:0,49,338	0/0:22,0:22:44.06:0,44,319	0/0:24,0:22:41.87:0,42,246	0/0:16,0:16:23.87:0,24,158	0/0:23,0:24:71.11:0,71,553	0/0:27,0:27:68.72:0,69,553	0/0:7,0:6:11.98:0,12,98
chr10	14454026	.	C	CT	2462.04	PASS	AB=0.600;AC=14;AF=0.250;AN=56;BaseQRankSum=-5.468;DP=615;FS=10.364;HRun=10;HaplotypeScore=68.6099;InbreedingCoeff=0.8055;MQ=57.73;MQ0=9;MQRankSum=-0.156;QD=13.17;ReadPosRankSum=2.315;VQSLOD=2.7160;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,31:40:68.96:709,69,0	0/0:5,0:5:11.98:0,12,99	0/0:12,0:6:4.34:0,4,25	0/0:12,0:4:2.95:0,3,19	0/0:24,0:23:47.91:0,48,393	0/0:20,0:21:32.65:0,33,133	0/0:26,0:26:44.39:0,44,204	0/0:35,0:35:40.11:0,40,486	0/0:13,0:13:26.95:0,27,221	0/0:25,0:25:53.80:0,54,431	0/0:19,0:19:41.94:0,42,344	1/1:3,18:21:17.46:390,17,0	1/1:6,11:17:26.28:257,26,0	1/1:5,16:21:9.19:267,9,0	0/0:19,0:21:18.80:0,19,283	0/0:31,0:31:61.87:0,62,492	0/0:29,0:28:55.91:0,56,448	0/0:25,0:25:53.87:0,54,437	0/0:21,0:23:25.44:0,25,201	0/0:18,1:19:9.91:0,10,283	0/0:24,0:24:53.86:0,54,436	1/1:6,15:22:26.81:237,27,0	0/1:9,14:23:0.54:200,0,1	0/1:7,19:24:1.05:342,0,1	1/1:2,13:16:20.58:245,21,0	0/0:26,0:27:37.87:0,38,296	0/0:27,0:27:61.66:0,62,492	0/0:7,0:6:5.99:0,6,49
chr10	14455189	.	TCC	T	1220.70	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.798;DP=616;FS=0.705;HRun=5;HaplotypeScore=73.6104;InbreedingCoeff=0.9911;MQ=86.34;MQ0=0;MQRankSum=-2.285;QD=30.52;ReadPosRankSum=-0.275;VQSLOD=2.9714;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,117,2108	0/0:11,0:11:33.11:0,33,605	0/0:21,0:21:57.19:0,57,1010	0/0:28,0:29:69.54:0,70,1224	0/0:19,0:19:57.18:0,57,1014	1/1:0,20:20:42.14:587,42,0	1/1:0,20:20:54.18:756,54,0	0/0:31,0:31:84.25:0,84,1425	0/0:23,0:23:69.24:0,69,1253	0/0:23,0:23:66.23:0,66,1208	0/0:14,0:14:39.13:0,39,714	0/0:20,0:20:60.16:0,60,1059	0/0:20,0:20:57.16:0,57,1010	0/0:20,0:20:57.17:0,57,1000	0/0:31,0:31:90.31:0,90,1639	0/0:16,0:16:42.14:0,42,742	0/0:41,0:41:99:0,120,2157	0/0:27,0:27:81.28:0,81,1471	0/0:24,0:24:66.20:0,66,1137	0/0:6,0:6:15.05:0,15,274	0/0:36,0:36:99:0,105,1893	0/0:16,0:16:45.13:0,45,744	0/0:17,0:17:45.15:0,45,823	0/0:34,0:34:99:0,102,1841	0/0:16,0:16:48.16:0,48,866	0/0:15,0:15:39.11:0,39,618	0/0:13,0:13:39.12:0,39,685	0/0:9,0:9:27.09:0,27,495
chr10	14455381	.	GCTGT	G	190.77	PASS	AB=0.783;AC=7;AF=0.167;AN=42;BaseQRankSum=0.691;DP=146;FS=0.000;HRun=0;HaplotypeScore=38.7489;InbreedingCoeff=0.1655;MQ=52.33;MQ0=6;MQRankSum=-2.051;QD=10.04;ReadPosRankSum=0.434;VQSLOD=1.6798;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:3,2:5:2.40:80,0,2	0/0:1,0:1:3.01:0,3,40	0/0:11,1:4:8.87:0,9,58	0/0:13,0:6:7.24:0,7,56	./.	0/0:9,0:9:9.03:0,9,252	0/0:5,0:5:8.29:0,8,248	1/1:3,0:3:0.47:1,0,0	0/0:3,0:3:6.02:0,6,135	./.	./.	0/0:4,0:4:5.59:0,6,133	0/0:4,0:4:9.03:0,9,147	0/0:3,0:3:6.02:0,6,91	0/0:5,0:5:9.03:0,9,144	0/1:3,1:4:50.83:51,0,79	0/0:9,1:9:20.22:0,20,287	0/0:9,0:9:17.16:0,17,258	0/0:4,0:3:3.01:0,3,30	./.	0/0:21,1:18:8.90:0,9,118	./.	./.	0/0:6,1:6:2.71:0,3,45	./.	1/1:0,2:2:6.02:120,6,0	0/0:3,0:3:6.02:0,6,136	0/1:4,1:5:44.82:45,0,248
chr10	14456374	.	GCCGT	G	181.59	PASS	AB=0.824;AC=5;AF=0.100;AN=50;BaseQRankSum=1.541;DP=155;FS=0.000;HRun=0;HaplotypeScore=35.6508;InbreedingCoeff=-0.2067;MQ=46.37;MQ0=10;MQRankSum=-3.416;QD=6.73;ReadPosRankSum=-0.954;VQSLOD=1.4504;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:7,1:7:17.27:0,17,355	./.	0/0:5,0:1:5.95:0,6,84	0/0:7,0:3:8.97:0,9,183	0/0:3,0:3:3.01:0,3,84	./.	0/0:8,0:8:11.98:0,12,246	0/1:6,1:6:37.33:37,0,371	0/0:4,0:4:12.04:0,12,295	0/1:3,1:3:41.49:54,0,41	0/0:4,0:4:6.02:0,6,129	0/0:3,0:3:6.02:0,6,138	0/1:3,0:3:24.79:25,0,77	0/0:5,1:6:4.56:0,5,72	0/0:2,0:2:3.01:0,3,84	0/0:3,0:3:6.02:0,6,154	0/1:5,2:7:17.81:18,0,287	0/0:5,0:4:6.02:0,6,130	0/0:5,0:5:12.04:0,12,248	0/0:2,0:1:3.01:0,3,70	0/0:38,2:31:19.92:0,20,551	0/0:5,0:5:9.02:0,9,151	0/0:6,0:6:8.84:0,9,105	0/0:4,0:4:3.01:0,3,69	0/0:2,0:2:3.01:0,3,84	0/1:3,3:4:46.76:158,0,47	./.	0/0:3,0:3:9.03:0,9,191
chr10	14457016	.	T	TA	692.84	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.265;DP=578;FS=6.966;HRun=0;HaplotypeScore=61.1244;InbreedingCoeff=0.9509;MQ=70.10;MQ0=0;MQRankSum=1.168;QD=16.50;ReadPosRankSum=0.645;VQSLOD=5.0551;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:57.18:0,57,769	0/0:7,0:7:21.03:0,21,251	0/0:16,0:15:14.02:0,14,381	0/0:10,0:10:12.38:0,12,174	0/0:22,0:22:66.20:0,66,891	1/1:3,19:22:20.35:424,20,0	1/1:4,16:20:23.04:389,23,0	0/0:24,0:24:72.23:0,72,977	0/0:13,0:13:39.13:0,39,539	0/0:28,0:28:84.23:0,84,1121	0/0:25,0:25:72.19:0,72,955	0/0:20,0:20:57.19:0,57,781	0/0:7,0:7:21.07:0,21,292	0/0:23,0:23:69.23:0,69,963	0/0:24,0:24:72.09:0,72,902	0/0:23,0:23:69.16:0,69,920	0/0:21,0:21:63.11:0,63,789	0/0:23,0:23:69.20:0,69,923	0/0:23,0:23:69.20:0,69,903	0/0:33,0:33:96.31:0,96,1322	0/0:4,0:4:12.04:0,12,168	0/0:24,0:24:66.21:0,66,905	0/0:32,0:32:93.30:0,93,1282	0/0:7,0:7:21.07:0,21,285	0/0:23,0:22:66.21:0,66,907	0/0:34,0:34:98.51:0,99,1312	0/0:32,0:31:96.31:0,96,1308	0/0:18,0:18:54.11:0,54,657
chr10	14457236	.	ACACCCAAGTT	A	22227.15	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=16.985;DP=579;FS=11.301;HRun=0;HaplotypeScore=205.2762;InbreedingCoeff=0.9874;MQ=72.26;MQ0=0;MQRankSum=-16.988;QD=67.97;ReadPosRankSum=-0.863;VQSLOD=3.2072;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,108,5449	1/1:2,5:7:15.05:484,15,0	0/0:10,0:10:15.03:0,15,598	0/0:18,0:22:40.35:0,40,1165	1/1:4,14:18:42.14:1358,42,0	1/1:1,12:13:27.09:874,27,0	1/1:6,13:19:36.12:1165,36,0	1/1:10,19:29:57.16:1633,57,0	1/1:0,19:19:51.18:1650,51,0	1/1:1,28:29:75.26:2428,75,0	1/1:0,8:8:21.07:679,21,0	0/0:33,0:33:99:0,99,5145	0/0:29,0:29:84.29:0,84,4115	0/0:29,0:29:84.29:0,84,4009	1/1:3,19:22:54.19:1748,54,0	1/1:4,23:27:69.24:2206,69,0	1/1:10,9:19:21.07:680,21,0	1/1:8,11:19:21.07:680,21,0	1/1:5,9:14:27.08:752,27,0	1/1:0,10:10:21.07:638,21,0	1/1:6,11:17:20.98:638,21,0	0/0:18,0:18:54.19:0,54,2775	0/0:19,0:19:54.19:0,54,2685	0/0:23,0:23:66.23:0,66,3307	0/0:30,0:30:78.27:0,78,4002	1/1:3,28:31:87.28:2673,87,0	1/1:2,17:19:48.16:1553,48,0	1/1:3,4:7:12.04:388,12,0
chr10	14457610	.	TA	T	1750	PASS	AB=0.900;AC=5;AF=0.089;AN=56;BaseQRankSum=10.623;DP=774;FS=0.543;HRun=2;HaplotypeScore=82.6336;InbreedingCoeff=0.7910;MQ=87.12;MQ0=0;MQRankSum=-1.079;QD=28.23;ReadPosRankSum=-0.678;VQSLOD=3.0804;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,141,2086	0/0:13,0:13:36.12:0,36,532	0/0:22,0:22:63.21:0,63,914	0/0:33,0:33:91.17:0,91,1301	0/0:22,0:22:57.19:0,57,852	1/1:0,17:17:45.15:581,45,0	1/1:0,36:36:99:1285,99,0	0/0:31,0:31:84.28:0,84,1254	0/0:25,0:25:75.21:0,75,1098	0/0:27,0:27:78.24:0,78,1130	0/1:8,1:9:11.87:12,0,332	0/0:36,0:36:99:0,106,1516	0/0:31,1:32:93.30:0,93,1372	0/0:44,0:44:99:0,126,1868	0/0:20,0:20:60.20:0,60,896	0/0:27,0:27:81.26:0,81,1188	0/0:37,0:37:99:0,108,1609	0/0:27,0:27:75.12:0,75,1029	0/0:25,0:25:72.24:0,72,1062	0/0:10,0:10:27.09:0,27,402	0/0:51,0:51:99:0,150,2201	0/0:16,0:16:48.15:0,48,701	0/0:19,0:19:57.19:0,57,851	0/0:37,0:37:99:0,111,1643	0/0:23,0:23:69.22:0,69,1012	0/0:32,0:32:96.32:0,96,1431	0/0:44,0:43:99:0,129,1866	0/0:12,0:12:36.10:0,36,515
chr10	14458068	.	G	GACCGGGATGTA	3757.05	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-2.112;DP=658;FS=4.038;HRun=0;HaplotypeScore=198.7765;InbreedingCoeff=0.9975;MQ=88.05;MQ0=0;MQRankSum=-7.857;QD=96.33;ReadPosRankSum=0.831;VQSLOD=3.6921;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:93.28:0,93,3028	0/0:15,0:15:42.14:0,42,1477	0/0:28,0:28:78.22:0,78,2340	0/0:22,0:22:60.07:0,60,1783	0/0:31,0:31:90.31:0,90,3153	1/1:3,5:11:21.07:1148,21,0	1/1:4,13:28:45.15:2609,45,0	0/0:42,0:42:99:0,126,4035	0/0:15,0:15:39.13:0,39,1384	0/0:31,0:31:90.30:0,90,3024	0/0:23,0:23:66.21:0,66,2180	0/0:33,0:33:93.32:0,93,3337	0/0:17,0:17:51.17:0,51,1599	0/0:17,0:17:48.15:0,48,1608	0/0:25,0:25:75.24:0,75,2515	0/0:24,0:24:69.20:0,69,2332	0/0:18,0:18:54.17:0,54,1791	0/0:25,0:25:75.26:0,75,2548	0/0:21,0:21:57.14:0,57,1566	0/0:26,0:26:75.24:0,75,2401	0/0:21,0:20:60.18:0,60,1785	0/0:23,0:23:63.20:0,63,2133	0/0:22,0:22:59.94:0,60,1778	0/0:11,0:11:30.10:0,30,1023	0/0:24,0:24:69.24:0,69,2433	0/0:32,0:32:93.31:0,93,3147	0/0:29,0:29:87.28:0,87,3058	0/0:13,0:13:39.09:0,39,1162
chr10	14458738	.	A	AG	2440.89	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.008;DP=772;FS=11.280;HRun=1;HaplotypeScore=73.5202;InbreedingCoeff=0.9994;MQ=82.87;MQ0=0;MQRankSum=-0.677;QD=36.98;ReadPosRankSum=0.859;VQSLOD=3.2254;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:58:99:0,171,2159	0/0:9,0:9:27.09:0,27,351	0/0:25,0:25:72.22:0,72,898	0/0:18,0:18:35.47:0,35,619	0/0:32,0:32:96.29:0,96,1229	1/1:1,23:24:60.20:899,60,0	1/1:1,41:42:99:1664,111,0	0/0:33,0:33:96.31:0,96,1246	0/0:34,0:34:99:0,99,1272	0/0:33,0:33:96.30:0,96,1234	0/0:14,0:14:42.11:0,42,517	0/0:19,0:19:54.17:0,54,698	0/0:32,0:32:96.27:0,96,1214	0/0:24,0:24:69.21:0,69,880	0/0:31,0:31:87.23:0,87,1096	0/0:29,0:29:84.27:0,84,1091	0/0:28,0:28:78.25:0,78,1012	0/0:18,0:18:54.12:0,54,656	0/0:29,0:29:84.26:0,84,1066	0/0:19,0:19:54.18:0,54,701	0/0:40,0:40:99:0,114,1468	0/0:29,0:29:87.27:0,87,1112	0/0:15,0:15:45.13:0,45,570	0/0:29,0:29:87.28:0,87,1129	0/0:22,0:22:66.21:0,66,857	0/0:38,0:38:99:0,102,1324	0/0:31,0:31:90.29:0,90,1168	0/0:17,0:17:51.14:0,51,645
chr10	14460803	.	A	AAGAG	33574.21	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-8.450;DP=662;FS=15.743;HRun=0;HaplotypeScore=97.5225;InbreedingCoeff=0.9899;MQ=65.86;MQ0=2;MQRankSum=-7.418;QD=55.68;ReadPosRankSum=4.066;VQSLOD=5.5550;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,26:33:78.04:1897,78,0	1/1:3,10:14:26.70:673,27,0	0/0:33,0:31:61.37:0,61,1029	0/0:24,0:19:30.10:0,30,529	1/1:5,13:18:36.12:917,36,0	1/1:1,17:18:39.13:1007,39,0	1/1:6,19:27:54.19:1405,54,0	1/1:14,28:45:99:2669,108,0	1/1:4,13:17:42.14:1080,42,0	1/1:5,17:22:54.19:1400,54,0	1/1:4,13:18:33.11:837,33,0	1/1:8,19:27:57.20:1467,57,0	1/1:8,17:27:54.18:1390,54,0	1/1:3,14:17:42.14:1076,42,0	1/1:8,24:32:72.25:1872,72,0	1/1:3,21:24:54.19:1408,54,0	1/1:7,18:24:66.23:1676,66,0	1/1:6,11:17:27.09:695,27,0	1/1:8,8:17:36.04:748,36,0	1/1:4,13:18:42.14:1068,42,0	1/1:5,9:14:30.10:745,30,0	1/1:6,26:33:66.23:1667,66,0	1/1:4,5:9:15.05:366,15,0	1/1:3,23:25:54.19:1411,54,0	1/1:4,16:20:48.16:1209,48,0	1/1:10,25:35:78.25:1960,78,0	1/1:3,26:30:71.98:1850,72,0	1/1:3,14:19:42.14:1080,42,0
chr10	14460809	.	G	GA	5145.29	PASS	AB=0.978;AC=40;AF=0.714;AN=56;BaseQRankSum=7.314;DP=590;FS=4.689;HRun=1;HaplotypeScore=146.0371;InbreedingCoeff=-0.0506;MQ=64.79;MQ0=2;MQRankSum=-4.985;QD=9.48;ReadPosRankSum=12.086;VQSLOD=0.9836;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:31,0:31:31.58:314,32,0	1/1:12,0:12:22.45:128,22,0	0/0:28,0:25:72.61:0,73,837	0/0:19,0:14:42.09:0,42,522	0/1:16,1:17:11.34:196,0,11	1/1:17,1:18:34.11:203,34,0	0/1:25,0:25:61.14:197,0,61	0/1:42,1:43:99:336,0,320	1/1:15,0:15:36.31:200,36,0	1/1:19,0:19:10.28:202,10,0	0/1:18,0:18:68.28:129,0,68	1/1:20,1:21:49.86:271,50,0	1/1:21,2:23:47.04:253,47,0	0/1:16,0:16:1.26:122,0,1	1/1:27,0:27:26.49:272,26,0	0/1:23,0:23:8.68:189,0,9	1/1:23,2:24:16.04:263,16,0	1/1:13,2:15:10.43:131,10,0	0/1:12,1:13:74.63:75,0,143	1/1:16,0:16:36.44:206,36,0	0/1:13,0:13:19.19:78,0,19	1/1:27,1:28:18.98:272,19,0	0/1:7,1:8:12.47:69,0,12	0/1:26,0:24:21.82:167,0,22	1/1:17,1:18:0.27:155,0,0	0/1:29,0:29:40.39:285,0,40	1/1:27,0:27:41.77:303,42,0	0/1:17,0:17:40.89:132,0,41
chr10	14460810	.	G	GAGGA	2973.63	PASS	AB=0.985;AC=37;AF=0.661;AN=56;BaseQRankSum=9.782;DP=598;FS=2.424;HRun=0;HaplotypeScore=183.3133;InbreedingCoeff=-0.2416;MQ=65.41;MQ0=2;MQRankSum=-3.819;QD=5.42;ReadPosRankSum=12.558;VQSLOD=0.6833;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:30:24.95:154,0,25	1/1:12,0:12:2.92:60,3,0	0/0:27,0:25:48.76:0,49,1003	0/0:21,0:15:38.50:0,39,598	1/1:16,1:17:12.48:160,12,0	1/1:19,0:19:29.16:114,29,0	0/1:25,0:25:99:113,0,133	0/1:46,0:46:99:226,0,423	1/1:15,0:15:30.55:132,31,0	0/1:19,0:19:18.30:107,0,18	0/1:18,0:18:92.92:93,0,106	1/1:21,0:21:22.22:173,22,0	1/1:21,1:22:37.36:175,37,0	1/1:16,0:16:6.36:59,6,0	0/1:27,0:27:21.20:175,0,21	1/1:22,0:22:0.92:112,1,0	0/1:25,0:24:29.14:116,0,29	0/1:15,1:16:11.16:64,0,11	0/1:14,1:15:62.52:63,0,169	1/1:16,0:16:14.80:133,15,0	0/1:13,0:13:40.14:40,0,43	1/1:28,0:28:9.94:191,10,0	0/1:7,0:8:7.69:99,0,8	0/1:25,0:24:57.65:115,0,58	0/1:18,0:18:32.76:76,0,33	0/1:30,0:30:36.98:188,0,37	1/1:27,0:27:15.48:145,15,0	0/1:18,0:18:59.72:60,0,100
chr10	14462161	.	GACCGA	G	794.71	PASS	AC=4;AF=0.077;AN=52;BaseQRankSum=6.520;DP=379;FS=0.000;HRun=0;HaplotypeScore=74.0598;InbreedingCoeff=0.8717;MQ=49.01;MQ0=20;MQRankSum=-5.859;QD=24.83;ReadPosRankSum=-1.050;VQSLOD=3.0833;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:30:66.23:0,66,2042	0/0:8,0:8:15.05:0,15,468	./.	./.	0/0:10,0:9:24.08:0,24,676	1/1:6,8:12:21.07:446,21,0	1/1:5,13:15:24.04:467,24,0	0/0:21,0:19:51.18:0,51,1552	0/0:11,0:11:30.10:0,30,933	0/0:18,0:16:42.14:0,42,1313	0/0:11,0:10:27.09:0,27,816	0/0:11,0:11:27.09:0,27,844	0/0:7,0:7:18.06:0,18,561	0/0:9,0:8:21.07:0,21,642	0/0:12,0:12:30.10:0,30,937	0/0:5,0:5:9.03:0,9,282	0/0:22,0:20:51.18:0,51,1559	0/0:17,0:17:36.12:0,36,1127	0/0:16,0:14:39.13:0,39,1158	0/0:13,0:13:36.11:0,36,1055	0/0:22,0:20:53.61:0,54,1496	0/0:4,0:4:2.88:0,3,94	0/0:15,0:14:39.13:0,39,1198	0/0:16,0:16:39.13:0,39,1196	0/0:11,0:11:33.11:0,33,1033	0/0:21,0:21:63.17:0,63,1820	0/0:15,0:15:35.79:0,36,1121	0/0:13,0:13:36.12:0,36,1097
chr10	14462174	.	GCCT	G	508.28	PASS	AC=4;AF=0.074;AN=54;BaseQRankSum=7.418;DP=404;FS=0.000;HRun=0;HaplotypeScore=65.8265;InbreedingCoeff=0.8777;MQ=51.16;MQ0=15;MQRankSum=-6.029;QD=18.15;ReadPosRankSum=-0.681;VQSLOD=3.0137;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:81.28:0,81,1948	0/0:6,0:6:12.04:0,12,296	./.	0/0:10,0:3:9.03:0,9,218	0/0:10,0:10:27.09:0,27,665	1/1:1,9:8:24.06:252,24,0	1/1:1,17:15:36.03:376,36,0	0/0:24,0:23:66.23:0,66,1625	0/0:11,0:11:30.10:0,30,735	0/0:20,0:19:51.13:0,51,1196	0/0:10,0:10:27.09:0,27,665	0/0:11,0:11:30.10:0,30,718	0/0:9,0:9:24.08:0,24,589	0/0:9,0:8:21.06:0,21,467	0/0:14,0:14:36.10:0,36,835	0/0:5,0:5:9.03:0,9,222	0/0:26,0:24:66.23:0,66,1607	0/0:14,0:14:36.12:0,36,887	0/0:19,0:17:48.16:0,48,1124	0/0:16,0:16:45.11:0,45,1053	0/0:22,0:22:59.99:0,60,1442	0/0:4,0:4:6.02:0,6,147	0/0:13,0:13:39.13:0,39,952	0/0:17,0:17:42.14:0,42,1034	0/0:12,0:12:36.12:0,36,886	0/0:23,0:23:69.24:0,69,1652	0/0:15,0:15:38.96:0,39,928	0/0:16,0:16:45.15:0,45,1109
chr10	14462178	.	T	TAA	735.44	PASS	AC=4;AF=0.074;AN=54;BaseQRankSum=7.100;DP=414;FS=2.816;HRun=0;HaplotypeScore=59.6604;InbreedingCoeff=0.8782;MQ=51.20;MQ0=16;MQRankSum=-5.654;QD=23.72;ReadPosRankSum=-2.054;VQSLOD=3.4514;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:75.26:0,75,1221	0/0:5,0:5:12.04:0,12,196	./.	0/0:11,0:3:9.03:0,9,137	0/0:10,0:10:27.09:0,27,440	1/1:3,9:10:30.05:364,30,0	1/1:2,17:16:39.11:492,39,0	0/0:26,0:25:66.19:0,66,1040	0/0:12,0:12:27.09:0,27,440	0/0:20,0:19:48.16:0,48,783	0/0:10,0:10:27.09:0,27,440	0/0:11,0:11:30.10:0,30,484	0/0:9,0:9:24.08:0,24,390	0/0:10,0:10:21.07:0,21,340	0/0:13,0:13:33.11:0,33,538	0/0:6,0:6:9.03:0,9,147	0/0:26,0:24:63.22:0,63,1028	0/0:15,0:15:39.13:0,39,626	0/0:19,0:17:51.12:0,51,766	0/0:16,0:16:42.14:0,42,685	0/0:22,0:22:60.19:0,60,943	0/0:4,0:4:6.02:0,6,98	0/0:14,0:14:39.11:0,39,609	0/0:17,0:17:42.14:0,42,685	0/0:12,0:12:36.12:0,36,584	0/0:22,0:22:60.20:0,60,979	0/0:13,0:13:33.11:0,33,538	0/0:17,0:17:48.16:0,48,777
chr10	14463577	.	ATAT	A	80.76	PASS	AB=0.936;AC=10;AF=0.179;AN=56;BaseQRankSum=1.657;DP=272;FS=3.486;HRun=0;HaplotypeScore=87.1815;InbreedingCoeff=0.0653;MQ=62.88;MQ0=2;MQRankSum=-3.042;QD=1.17;ReadPosRankSum=-8.700;VQSLOD=-0.0678;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:42.61:0,43,538	0/1:7,0:7:7.81:8,0,106	0/0:3,0:3:8.98:0,9,75	0/1:5,0:3:0.46:0,0,41	0/1:12,0:13:9.43:9,0,266	0/1:1,4:5:0:0,0,0	1/1:0,10:10:9.03:151,9,0	0/0:23,0:24:46.60:0,47,471	0/0:10,0:10:0.36:0,0,164	0/0:6,0:6:7.52:0,8,59	0/0:11,0:11:4.41:0,4,156	0/0:10,0:10:27.72:0,28,281	0/0:3,0:3:4.89:0,5,54	0/0:8,0:8:8:0,8,221	0/1:13,0:13:6.20:6,0,349	0/1:5,0:5:0.50:1,0,108	0/0:20,0:20:30.09:0,30,595	0/0:8,0:7:16.29:0,16,198	0/0:16,0:16:43.07:0,43,496	0/0:5,0:5:13.51:0,14,110	0/1:5,0:5:11.68:12,0,100	0/0:4,0:4:6.33:0,6,80	0/0:6,0:6:16.48:0,16,165	0/1:6,0:6:9.29:9,0,54	0/0:15,0:15:29.01:0,29,387	0/0:10,0:10:22.85:0,23,216	0/0:13,0:13:3.97:0,4,344	0/0:11,0:10:23.54:0,24,319
chr10	14463680	.	CATATACATATACAT	C	5838.35	PASS	AB=0.500;AC=19;AF=0.528;AN=36;BaseQRankSum=0.737;DP=439;FS=2.200;HRun=0;HaplotypeScore=158.1234;InbreedingCoeff=0.5135;MQ=63.84;MQ0=13;MQRankSum=-1.378;QD=31.22;ReadPosRankSum=3.195;VQSLOD=3.8514;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:6,16:20:0.47:0,0,1	./.	0/0:22,0:8:2.56:0,3,65	0/0:28,0:11:6.98:0,7,25	./.	./.	./.	1/1:19,0:19:44.97:705,45,0	1/1:0,9:9:3.01:125,3,0	1/1:5,19:24:45.10:1184,45,0	./.	./.	1/1:1,20:21:3:74,3,0	./.	./.	1/1:0,17:17:3.01:125,3,0	0/0:0,18:18:0.47:0,0,1	1/1:15,0:15:29.84:515,30,0	1/1:5,15:18:42.70:1190,43,0	0/0:1,17:17:0.46:0,0,1	./.	0/0:0,11:11:0.47:0,0,1	0/0:0,12:12:0.47:0,0,1	./.	0/1:0,13:13:0:0,0,0	1/1:1,23:24:57.11:1261,57,0	1/1:3,22:25:17.96:658,18,0	0/0:3,6:9:0.47:0,0,1
chr10	14463692	.	CAT	C	2233.30	PASS	AB=1.000;AC=24;AF=0.667;AN=36;BaseQRankSum=-0.638;DP=396;FS=2.082;HRun=0;HaplotypeScore=128.9581;InbreedingCoeff=0.4531;MQ=70.69;MQ0=7;MQRankSum=-3.189;QD=11.34;ReadPosRankSum=3.248;VQSLOD=3.7703;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:17,0:9:1.75:0,2,5	0/0:27,0:12:0.96:0,1,35	./.	./.	0/0:2,0:2:2.99:0,3,24	1/1:0,14:14:42.09:487,42,0	1/1:9,0:9:2.98:21,3,0	1/1:19,0:19:35.88:351,36,0	./.	./.	1/1:20,0:20:3.01:39,3,0	./.	./.	1/1:17,0:17:2.97:20,3,0	0/0:18,0:18:0:0,0,0	1/1:1,9:10:21.07:266,21,0	1/1:15,0:15:41.84:410,42,0	0/1:17,0:17:0.02:0,0,0	1/1:0,6:6:6.02:77,6,0	1/1:12,0:12:2.13:8,2,0	0/0:12,0:12:0:0,0,0	./.	0/1:13,0:13:0:0,0,0	1/1:23,0:23:47.97:514,48,0	1/1:22,0:21:17.72:136,18,0	./.
chr10	14464884	.	A	AT	21691.79	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-10.148;DP=666;FS=9.840;HRun=0;HaplotypeScore=56.7516;InbreedingCoeff=0.9966;MQ=69.66;MQ0=0;MQRankSum=-4.304;QD=35.91;ReadPosRankSum=3.025;VQSLOD=3.9644;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,40:41:99:1507,101,0	1/1:0,6:6:18.06:247,18,0	0/0:13,0:13:35.08:0,35,403	0/0:10,0:10:26.89:0,27,307	1/1:1,28:29:78.12:1053,78,0	0/0:18,0:18:54.08:0,54,695	0/0:21,0:21:56.03:0,56,800	1/1:0,36:36:99:1316,105,0	1/1:1,25:26:59.01:923,59,0	1/1:0,34:34:99:1301,102,0	1/1:0,21:21:54.18:769,54,0	1/1:0,23:23:63.21:882,63,0	1/1:0,19:19:51.17:703,51,0	1/1:0,25:25:66.22:917,66,0	1/1:0,21:21:54.18:760,54,0	1/1:1,33:33:90.30:1278,90,0	1/1:2,29:31:72.24:1029,72,0	1/1:0,39:39:99:1474,105,0	1/1:2,20:22:60.18:824,60,0	1/1:0,22:22:63.20:847,63,0	1/1:1,19:20:45.15:634,45,0	1/1:0,17:17:51.02:669,51,0	1/1:1,21:22:54.36:755,54,0	1/1:0,12:12:24.08:343,24,0	1/1:0,13:13:27.09:377,27,0	1/1:1,31:32:93.26:1254,93,0	1/1:0,34:33:73.30:972,73,0	1/1:0,25:25:60.20:857,60,0
chr10	14465857	.	A	AT	2509.53	PASS	AB=0.884;AC=19;AF=0.339;AN=56;BaseQRankSum=-4.852;DP=610;FS=0.388;HRun=12;HaplotypeScore=83.9428;InbreedingCoeff=0.5189;MQ=78.20;MQ0=3;MQRankSum=2.046;QD=9.73;ReadPosRankSum=0.440;VQSLOD=3.0450;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,18:25:13.11:437,13,0	0/0:8,0:8:23.86:0,24,174	0/1:35,0:27:14.59:15,0,63	0/0:19,0:14:1.94:0,2,56	0/0:20,0:21:43.76:0,44,312	0/0:9,0:9:20.84:0,21,152	0/0:26,0:26:63.41:0,63,456	0/0:28,2:31:0.27:0,0,319	0/0:18,0:20:34.12:0,34,232	0/0:25,2:27:4.31:0,4,357	0/1:23,4:28:62.05:62,0,251	1/1:3,14:19:29.72:260,30,0	1/1:10,7:18:11.34:266,11,0	1/1:12,9:21:35.05:455,35,0	0/0:26,0:26:54.51:0,55,393	0/0:23,1:26:16.47:0,16,267	0/0:15,0:15:32.75:0,33,241	0/0:21,2:23:31.37:0,31,388	0/1:19,2:21:12.33:12,0,76	0/0:22,0:21:28.64:0,29,313	0/1:15,0:15:8.87:9,0,159	0/1:7,9:17:31.85:186,0,32	1/1:7,15:23:52.15:479,52,0	1/1:7,5:13:20.86:184,21,0	1/1:8,14:23:16.47:337,16,0	0/0:27,0:30:74.64:0,75,519	0/0:20,1:22:17.42:0,17,275	0/0:24,2:26:15.84:0,16,441
chr10	14466726	.	G	GT	1125.25	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=3.332;DP=708;FS=0.000;HRun=7;HaplotypeScore=84.2252;InbreedingCoeff=0.9995;MQ=76.97;MQ0=0;MQRankSum=-3.698;QD=27.45;ReadPosRankSum=-1.094;VQSLOD=3.6226;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,111,1046	0/0:12,0:12:33.05:0,33,318	0/0:20,0:20:51.08:0,51,493	0/0:17,0:17:36.52:0,37,348	0/0:21,0:21:51.08:0,51,493	1/1:2,19:22:60.05:703,60,0	1/1:3,16:19:45.14:544,45,0	0/0:28,0:28:75.10:0,75,716	0/0:30,0:30:90.09:0,90,858	0/0:33,0:33:90.13:0,90,866	0/0:15,0:15:45.07:0,45,435	0/0:39,0:39:99:0,105,1013	0/0:27,0:27:75.10:0,75,718	0/0:23,0:23:60.09:0,60,579	0/0:28,0:28:84.14:0,84,811	0/0:23,0:23:69.11:0,69,666	0/0:41,0:41:99:0,117,1122	0/0:26,0:25:72.11:0,72,695	0/0:30,0:30:75.07:0,75,711	0/0:25,0:25:66.11:0,66,637	0/0:28,0:28:72.10:0,72,695	0/0:19,0:19:54.09:0,54,522	0/0:18,0:18:42.06:0,42,406	0/0:32,0:32:86.93:0,87,840	0/0:25,0:25:60.09:0,60,579	0/0:33,0:33:93.15:0,93,898	0/0:24,0:24:72.12:0,72,695	0/0:10,0:10:30:0,30,275
chr10	14467876	.	C	CTTTT	1484.53	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-1.498;DP=661;FS=2.509;HRun=9;HaplotypeScore=144.8883;InbreedingCoeff=0.9979;MQ=73.75;MQ0=0;MQRankSum=-5.911;QD=42.42;ReadPosRankSum=-3.026;VQSLOD=1.2000;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:57:99:0,156,2219	0/0:8,0:8:24.05:0,24,329	0/0:16,0:16:33.06:0,33,458	0/0:14,0:14:27.60:0,28,330	0/0:35,0:38:94.71:0,95,1285	1/1:7,8:16:31.92:710,32,0	1/1:5,12:19:42.14:896,42,0	0/0:32,0:33:82.45:0,82,1167	0/0:21,0:22:60.16:0,60,856	0/0:30,0:30:49.98:0,50,1011	0/0:20,0:20:57.14:0,57,797	0/0:28,0:28:78.19:0,78,1117	0/0:18,0:18:54.18:0,54,790	0/0:20,0:20:51.14:0,51,723	0/0:21,0:21:60.17:0,60,839	0/0:19,0:19:51.12:0,51,727	0/0:35,0:35:87.23:0,87,1269	0/0:21,0:21:45.03:0,45,632	0/0:13,0:14:33.04:0,33,445	0/0:27,0:27:53.93:0,54,1069	0/0:20,0:20:60.20:0,60,878	0/0:16,0:16:42.10:0,42,574	0/0:15,0:15:39.10:0,39,550	0/0:31,0:32:81.23:0,81,1160	0/0:20,0:19:48.09:0,48,702	0/0:31,0:34:88.47:0,88,1245	0/0:33,0:33:87.25:0,87,1272	0/0:15,0:15:39.12:0,39,570
chr10	14468892	.	GT	G	921.29	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.602;DP=650;FS=3.059;HRun=8;HaplotypeScore=85.9257;InbreedingCoeff=0.9910;MQ=68.19;MQ0=2;MQRankSum=-0.549;QD=20.47;ReadPosRankSum=0.486;VQSLOD=3.5510;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,120,1391	0/0:11,0:11:27.08:0,27,326	0/0:18,0:15:27.08:0,27,317	0/0:25,0:16:15.32:0,15,306	0/0:35,0:35:96.29:0,96,1158	1/1:4,21:25:60.09:579,60,0	1/1:1,19:20:48.08:464,48,0	0/0:25,0:25:57.16:0,57,668	0/0:20,0:20:51.16:0,51,616	0/0:30,0:30:81.24:0,81,970	0/0:28,0:28:75.21:0,75,885	0/0:20,0:20:60.16:0,60,704	0/0:22,0:22:63.18:0,63,748	0/0:16,0:16:45.13:0,45,533	0/0:21,0:20:54.12:0,54,636	0/0:19,0:19:51.14:0,51,605	0/0:30,0:30:84.26:0,84,1014	0/0:33,0:33:84.26:0,84,1015	0/0:18,0:17:48.15:0,48,580	0/0:28,0:28:78.24:0,78,942	0/0:18,0:18:48.14:0,48,570	0/0:21,0:21:63.17:0,63,740	0/0:14,0:14:36.11:0,36,435	0/0:27,0:27:72.21:0,72,859	0/0:11,0:11:30.08:0,30,352	0/0:18,0:18:48.15:0,48,580	0/0:38,0:38:99:0,105,1265	0/0:17,0:17:45.13:0,45,534
chr10	14469718	.	C	CCTT	2110.75	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-6.824;DP=677;FS=1.394;HRun=0;HaplotypeScore=93.1328;InbreedingCoeff=0.9972;MQ=89.16;MQ0=0;MQRankSum=-4.212;QD=49.09;ReadPosRankSum=1.139;VQSLOD=5.5965;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,135,2148	0/0:10,0:10:27.08:0,27,433	0/0:30,0:30:77.27:0,77,1228	0/0:23,0:23:54.18:0,54,881	0/0:17,0:17:47.91:0,48,698	1/1:0,17:17:42.14:968,42,0	1/1:0,25:26:57.15:1264,57,0	0/0:26,0:26:69.21:0,69,1105	0/0:20,0:20:57.16:0,57,918	0/0:21,0:21:63.21:0,63,1052	0/0:8,0:8:20.88:0,21,357	0/0:25,0:25:75.24:0,75,1246	0/0:31,0:31:93.27:0,93,1497	0/0:35,0:35:99:0,102,1707	0/0:28,0:28:84.29:0,84,1428	0/0:26,0:26:75.24:0,75,1225	0/0:43,0:43:99:0,126,2114	0/0:24,0:24:69.24:0,69,1168	0/0:20,0:20:54.16:0,54,870	0/0:14,0:14:42.14:0,42,716	0/0:36,0:36:99:0,99,1632	0/0:22,0:22:66.20:0,66,1068	0/0:18,0:18:48.15:0,48,786	0/0:30,0:30:87.30:0,87,1483	0/0:22,0:22:63.22:0,63,1067	0/0:21,0:21:54.16:0,54,845	0/0:26,0:25:75.26:0,75,1261	0/0:12,0:12:36.12:0,36,614
chr10	14469974	.	CA	C	1280.70	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.759;DP=651;FS=0.000;HRun=2;HaplotypeScore=67.0727;InbreedingCoeff=0.9949;MQ=82.18;MQ0=0;MQRankSum=-3.807;QD=31.24;ReadPosRankSum=-0.254;VQSLOD=3.0784;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:72.24:0,72,1078	0/0:9,0:9:27.09:0,27,403	0/0:19,0:19:53.23:0,53,662	0/0:18,0:18:46.92:0,47,585	0/0:9,0:9:24.08:0,24,360	1/1:0,18:18:45.15:584,45,0	1/1:0,23:23:63.20:818,63,0	0/0:37,0:37:99:0,105,1482	0/0:35,0:35:99:0,99,1460	0/0:20,0:20:60.20:0,60,900	0/0:7,0:7:21.07:0,21,314	0/0:30,0:30:87.29:0,87,1292	0/0:30,0:30:90.29:0,90,1327	0/0:34,0:34:99:0,102,1527	0/0:41,0:41:99:0,123,1766	0/0:24,0:24:72.24:0,72,1078	0/0:35,0:35:99:0,102,1529	0/0:34,0:34:99:0,102,1521	0/0:19,0:19:51.15:0,51,735	0/0:14,0:14:39.13:0,39,584	0/0:37,0:37:99:0,108,1556	0/0:23,0:23:66.20:0,66,942	0/0:10,0:10:30.09:0,30,429	0/0:38,0:38:99:0,111,1664	0/0:13,0:13:39.12:0,39,553	0/0:14,0:14:42.14:0,42,629	0/0:27,0:26:81.27:0,81,1208	0/0:8,0:8:24.07:0,24,339
chr10	14470469	.	CTT	C	2218.64	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.680;DP=663;FS=1.757;HRun=4;HaplotypeScore=78.9454;InbreedingCoeff=0.9996;MQ=80.19;MQ0=0;MQRankSum=-1.334;QD=38.25;ReadPosRankSum=0.678;VQSLOD=3.1372;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,123,2191	0/0:11,0:11:33.10:0,33,588	0/0:19,0:19:57.18:0,57,964	0/0:21,0:21:57.13:0,57,960	0/0:25,0:25:72.24:0,72,1318	1/1:1,25:26:72.24:1059,72,0	1/1:1,31:32:87.29:1281,87,0	0/0:30,0:30:90.27:0,90,1518	0/0:36,0:36:99:0,99,1855	0/0:22,0:22:66.20:0,66,1150	0/0:17,0:17:51.17:0,51,955	0/0:31,0:31:90.31:0,90,1683	0/0:19,0:19:57.15:0,57,945	0/0:29,0:29:84.27:0,84,1514	0/0:29,0:29:87.27:0,87,1533	0/0:13,0:13:39.12:0,39,654	0/0:12,0:12:36.11:0,36,643	0/0:25,0:25:72.20:0,72,1312	0/0:30,0:30:80.71:0,81,1446	0/0:16,0:16:48.16:0,48,899	0/0:40,0:40:99:0,114,2055	0/0:18,0:18:51.17:0,51,953	0/0:11,0:11:33.11:0,33,612	0/0:19,0:19:54.13:0,54,925	0/0:13,0:13:36.11:0,36,638	0/0:28,0:28:81.25:0,81,1403	0/0:30,0:30:87.29:0,87,1588	0/0:20,0:20:60.21:0,60,1124
chr10	14474167	.	G	GA	4746.65	PASS	AB=0.723;AC=45;AF=0.804;AN=56;BaseQRankSum=-2.936;DP=626;FS=0.597;HRun=14;HaplotypeScore=72.2743;InbreedingCoeff=-0.2295;MQ=51.85;MQ0=14;MQRankSum=0.145;QD=7.58;ReadPosRankSum=1.124;VQSLOD=3.9974;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:35,16:52:12.44:464,0,12	0/1:7,6:13:21.43:71,0,21	1/1:16,0:3:2.68:11,3,0	0/1:9,0:3:7.40:7,0,12	1/1:12,14:24:7.68:181,8,0	0/1:8,6:15:8.09:111,0,8	1/1:5,12:17:17.21:179,17,0	1/1:17,17:32:24.60:357,25,0	0/1:11,10:21:37.11:37,0,49	1/1:11,15:26:32.99:287,33,0	1/1:5,11:16:31.01:270,31,0	0/1:13,14:27:38.43:54,0,38	0/1:7,13:21:20.53:101,0,21	1/1:18,6:23:14:201,14,0	1/1:6,16:25:8.89:247,9,0	0/1:10,17:26:12.93:228,0,13	1/1:9,17:25:4.73:165,5,0	1/1:9,21:30:22.29:250,22,0	0/1:7,5:13:12.49:104,0,12	1/1:5,8:12:14.96:125,15,0	0/1:14,1:15:22.98:59,0,23	1/1:4,14:18:23.91:195,24,0	1/1:3,10:13:17.75:131,18,0	1/1:10,19:30:10.45:109,10,0	1/1:7,13:21:9.36:127,9,0	1/1:14,15:30:16.49:290,16,0	1/1:7,16:23:19.52:227,20,0	0/1:7,14:20:8.70:160,0,9
chr10	14474742	.	TA	T	11815.23	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=6.346;DP=590;FS=14.503;HRun=6;HaplotypeScore=192.2567;InbreedingCoeff=0.9916;MQ=76.44;MQ0=0;MQRankSum=-9.013;QD=21.25;ReadPosRankSum=4.656;VQSLOD=2.7257;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,25:33:75.02:721,75,0	1/1:1,9:10:26.71:253,27,0	0/0:14,0:14:39.10:0,39,450	0/0:19,1:20:48.11:0,48,579	1/1:4,14:20:32.82:315,33,0	1/1:0,19:19:48.03:459,48,0	1/1:6,18:24:44.67:339,45,0	1/1:13,14:27:42:379,42,0	1/1:3,25:28:75.08:731,75,0	1/1:6,19:25:53.63:467,54,0	1/1:3,11:14:26.78:225,27,0	1/1:6,21:27:62.86:572,63,0	1/1:2,15:17:42.05:419,42,0	1/1:8,11:18:42.01:398,42,0	1/1:1,31:32:87.10:862,87,0	1/1:6,21:26:69.08:683,69,0	1/1:1,21:22:57.03:563,57,0	1/1:6,22:28:63.10:632,63,0	1/1:10,9:18:32.26:306,32,0	1/1:2,16:18:44.95:399,45,0	1/1:6,27:32:73.63:721,74,0	1/1:3,16:19:44.41:395,44,0	1/1:2,11:13:18.01:177,18,0	1/1:6,18:24:42.95:415,43,0	1/1:5,14:19:53.35:490,53,0	1/1:0,17:17:51:472,51,0	1/1:4,9:13:26.96:234,27,0	1/1:2,7:9:21:192,21,0
chr10	14474750	.	G	GCTTT	37471.12	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-1.858;DP=574;FS=12.349;HRun=0;HaplotypeScore=147.4421;InbreedingCoeff=0.9974;MQ=75.76;MQ0=0;MQRankSum=-9.058;QD=69.26;ReadPosRankSum=3.672;VQSLOD=6.5421;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,25:31:78.27:2029,78,0	1/1:2,9:11:33.11:842,33,0	0/0:14,0:14:42.14:0,42,802	0/0:19,0:19:45.13:0,45,798	1/1:5,14:19:47.97:1173,48,0	1/1:7,15:22:57.18:1477,57,0	1/1:2,19:21:63.22:1583,63,0	1/1:12,13:24:69.21:1639,69,0	1/1:1,26:27:81.28:2189,81,0	1/1:1,20:21:60.20:1507,60,0	1/1:2,11:14:42.14:1064,42,0	1/1:4,21:25:66.23:1724,66,0	1/1:6,15:21:54.14:1357,54,0	1/1:4,11:15:42.11:923,42,0	1/1:6,28:34:96.21:2451,96,0	1/1:4,21:25:72.25:1892,72,0	1/1:5,18:23:69.15:1599,69,0	1/1:2,23:28:72.25:1969,72,0	1/1:3,10:13:39.11:952,39,0	1/1:2,16:18:51.18:1339,51,0	1/1:3,28:33:87.24:2191,87,0	1/1:8,14:22:63.10:1409,63,0	1/1:6,9:15:36.12:925,36,0	1/1:3,18:21:54.52:1299,55,0	1/1:3,14:18:51.17:1292,51,0	1/1:3,15:18:54.15:1314,54,0	1/1:2,9:11:30.10:781,30,0	1/1:2,7:9:21.07:553,21,0
chr10	14475982	.	AT	A	708.93	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.044;DP=811;FS=5.226;HRun=1;HaplotypeScore=90.1684;InbreedingCoeff=0.9978;MQ=76.11;MQ0=0;MQRankSum=-6.819;QD=27.27;ReadPosRankSum=1.058;VQSLOD=3.4020;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,102,1631	0/0:14,0:14:42.14:0,42,669	0/0:28,0:28:84.28:0,84,1309	0/0:24,0:24:56.94:0,57,860	0/0:26,0:26:78.27:0,78,1247	1/1:2,11:13:36.09:415,36,0	1/1:3,10:13:36.07:416,36,0	0/0:43,0:43:99:0,123,1912	0/0:31,0:31:93.32:0,93,1486	0/0:36,0:36:99:0,108,1714	0/0:20,0:20:60.19:0,60,936	0/0:45,0:45:99:0,135,2109	0/0:37,0:37:99:0,105,1677	0/0:37,0:37:99:0,111,1767	0/0:40,0:40:99:0,120,1910	0/0:37,0:37:99:0,111,1752	0/0:29,0:29:87.30:0,87,1388	0/0:36,0:36:99:0,108,1726	0/0:26,0:26:78.27:0,78,1246	0/0:26,0:26:78.24:0,78,1201	0/0:35,0:35:99:0,105,1651	0/0:29,0:29:87.28:0,87,1368	0/0:18,0:18:54.18:0,54,860	0/0:38,0:38:99:0,114,1816	0/0:24,0:24:69.22:0,69,1079	0/0:32,0:32:96.32:0,96,1512	0/0:32,0:31:96.30:0,96,1488	0/0:7,0:7:21.07:0,21,336
chr10	14475986	.	T	TTACA	1163.06	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.816;DP=816;FS=7.310;HRun=0;HaplotypeScore=141.6120;InbreedingCoeff=0.9985;MQ=76.33;MQ0=0;MQRankSum=-7.483;QD=50.57;ReadPosRankSum=2.449;VQSLOD=4.2435;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:99:0,99,2022	0/0:14,0:14:42.14:0,42,880	0/0:25,0:25:69.23:0,69,1394	0/0:25,0:25:73.99:0,74,1306	0/0:27,0:27:78.27:0,78,1620	1/1:2,11:13:33.11:699,33,0	1/1:0,9:10:30.10:586,30,0	0/0:41,0:41:99:0,120,2397	0/0:32,0:32:96.32:0,96,1970	0/0:34,0:34:99:0,102,2078	0/0:22,0:22:63.21:0,63,1270	0/0:44,0:44:99:0,129,2650	0/0:39,0:39:99:0,108,2226	0/0:38,0:38:99:0,114,2295	0/0:39,0:39:99:0,117,2438	0/0:37,0:37:99:0,111,2315	0/0:30,0:30:90.29:0,90,1847	0/0:36,0:36:99:0,108,2223	0/0:27,0:27:81.28:0,81,1686	0/0:24,0:24:72.25:0,72,1492	0/0:41,0:41:99:0,117,2284	0/0:29,0:29:87.30:0,87,1809	0/0:20,0:20:57.16:0,57,1152	0/0:40,0:40:99:0,120,2439	0/0:25,0:25:69.24:0,69,1429	0/0:31,0:31:93.32:0,93,1943	0/0:32,0:31:96.33:0,96,1986	0/0:8,0:8:24.05:0,24,443
chr10	14475987	.	G	GCA	623.20	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.643;DP=826;FS=5.870;HRun=0;HaplotypeScore=109.9928;InbreedingCoeff=0.9977;MQ=76.24;MQ0=0;MQRankSum=-7.563;QD=24.93;ReadPosRankSum=2.828;VQSLOD=4.8048;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,99,1584	0/0:14,0:14:42.14:0,42,685	0/0:27,0:27:69.23:0,69,1096	0/0:25,0:25:74.11:0,74,1096	0/0:27,0:27:78.27:0,78,1271	1/1:2,11:13:33.10:417,33,0	1/1:3,9:12:23.93:328,24,0	0/0:40,0:40:99:0,117,1862	0/0:32,0:32:96.33:0,96,1554	0/0:33,0:34:99:0,102,1638	0/0:22,0:22:63.22:0,63,1022	0/0:44,0:44:99:0,132,2118	0/0:39,0:39:99:0,108,1761	0/0:37,0:37:99:0,111,1786	0/0:39,0:39:99:0,117,1885	0/0:37,0:37:99:0,111,1811	0/0:30,0:30:90.31:0,90,1468	0/0:37,0:37:99:0,105,1712	0/0:27,0:27:81.28:0,81,1322	0/0:25,0:25:72.25:0,72,1174	0/0:42,0:42:99:0,123,1942	0/0:29,0:29:87.30:0,87,1419	0/0:21,0:21:60.18:0,60,946	0/0:41,0:41:99:0,120,1957	0/0:25,0:25:69.24:0,69,1125	0/0:31,0:31:93.32:0,93,1515	0/0:33,0:32:96.33:0,96,1566	0/0:8,0:8:24.06:0,24,365
chr10	14475989	.	A	AGCCC	882.24	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.978;DP=835;FS=7.339;HRun=0;HaplotypeScore=145.5017;InbreedingCoeff=0.9682;MQ=76.08;MQ0=0;MQRankSum=-7.034;QD=33.93;ReadPosRankSum=2.104;VQSLOD=3.6929;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,105,2095	0/0:14,0:14:42.14:0,42,862	0/0:30,0:30:83.95:0,84,1591	0/0:25,0:25:75.08:0,75,1452	0/0:27,0:27:81.28:0,81,1685	1/1:2,11:13:33.11:561,33,0	1/1:3,9:13:9.21:435,9,0	0/0:37,0:37:99:0,111,2239	0/0:32,0:32:96.32:0,96,1957	0/0:34,0:34:99:0,102,2085	0/0:22,0:22:66.23:0,66,1367	0/0:44,0:44:99:0,132,2749	0/0:39,0:39:99:0,111,2291	0/0:36,0:36:99:0,108,2265	0/0:39,0:39:99:0,117,2418	0/0:39,0:39:99:0,114,2332	0/0:31,0:31:93.31:0,93,1913	0/0:37,0:37:99:0,108,2207	0/0:27,0:27:78.27:0,78,1596	0/0:26,0:26:78.25:0,78,1565	0/0:44,0:44:99:0,132,2640	0/0:30,0:30:87.30:0,87,1805	0/0:22,0:22:66.21:0,66,1324	0/0:42,0:42:99:0,126,2555	0/0:25,0:25:72.25:0,72,1459	0/0:31,0:31:93.31:0,93,1894	0/0:33,0:32:99:0,99,2062	0/0:8,0:8:21.07:0,21,441
chr10	14475990	.	A	AG	620.09	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.309;DP=856;FS=12.684;HRun=1;HaplotypeScore=103.6320;InbreedingCoeff=0.9979;MQ=75.88;MQ0=0;MQRankSum=-8.876;QD=14.76;ReadPosRankSum=0.149;VQSLOD=2.1531;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,102,1295	0/0:15,0:15:39.13:0,39,506	0/0:31,0:31:84.21:0,84,1024	0/0:24,0:24:72.22:0,72,894	0/0:27,0:27:81.26:0,81,1051	1/1:8,11:19:44.85:352,45,0	1/1:14,9:23:43.22:389,43,0	0/0:37,0:37:99:0,105,1339	0/0:32,0:32:93.29:0,93,1191	0/0:34,0:34:99:0,99,1277	0/0:22,0:22:66.21:0,66,853	0/0:45,0:45:99:0,129,1674	0/0:39,0:39:99:0,111,1424	0/0:37,0:37:99:0,108,1402	0/0:40,0:40:99:0,117,1505	0/0:39,0:39:99:0,117,1478	0/0:33,0:33:93.29:0,93,1192	0/0:38,0:38:96.65:0,97,1351	0/0:27,0:27:78.24:0,78,983	0/0:26,0:26:78.23:0,78,984	0/0:43,0:43:99:0,129,1648	0/0:30,0:30:87.27:0,87,1115	0/0:22,0:22:66.20:0,66,836	0/0:43,0:43:99:0,120,1543	0/0:25,0:25:69.20:0,69,878	0/0:30,0:30:87.28:0,87,1130	0/0:33,0:32:99:0,99,1284	0/0:7,0:7:21.07:0,21,273
chr10	14476572	.	TCCTA	T	2010.70	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.027;DP=835;FS=5.904;HRun=0;HaplotypeScore=133.5712;InbreedingCoeff=0.9999;MQ=86.00;MQ0=0;MQRankSum=-3.449;QD=41.89;ReadPosRankSum=0.822;VQSLOD=3.8108;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,141,3741	0/0:14,0:14:42.14:0,42,1121	0/0:34,0:34:87.03:0,87,2197	0/0:24,0:24:63.22:0,63,1596	0/0:26,0:26:72.25:0,72,1943	1/1:0,17:17:45.07:763,45,0	1/1:5,26:31:75.21:1369,75,0	0/0:32,0:32:87.30:0,87,2297	0/0:24,0:24:72.25:0,72,1907	0/0:32,0:32:93.32:0,93,2461	0/0:13,0:13:39.13:0,39,1053	0/0:32,0:32:87.30:0,87,2339	0/0:38,0:38:99:0,111,2872	0/0:38,0:38:99:0,108,2830	0/0:37,0:37:99:0,108,2896	0/0:36,0:36:99:0,108,2899	0/0:31,0:31:93.30:0,93,2425	0/0:20,0:20:57.20:0,57,1531	0/0:30,0:30:87.30:0,87,2270	0/0:25,0:25:75.26:0,75,1967	0/0:46,0:46:99:0,123,3304	0/0:30,0:30:84.29:0,84,2267	0/0:16,0:16:45.15:0,45,1206	0/0:39,0:39:99:0,105,2810	0/0:27,0:27:81.27:0,81,2084	0/0:37,0:37:99:0,108,2791	0/0:32,0:32:96.33:0,96,2507	0/0:25,0:25:60.20:0,60,1619
chr10	14476641	.	T	TA	1223.91	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-2.982;DP=744;FS=0.000;HRun=1;HaplotypeScore=68.3552;InbreedingCoeff=0.9997;MQ=91.34;MQ0=0;MQRankSum=-2.702;QD=37.09;ReadPosRankSum=-1.977;VQSLOD=3.2316;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,114,1461	0/0:13,0:13:39.06:0,39,469	0/0:37,0:37:99:0,105,1308	0/0:27,0:27:71.96:0,72,863	0/0:29,0:29:87.27:0,87,1114	1/1:1,10:11:30.10:439,30,0	1/1:2,20:22:66.09:907,66,0	0/0:30,0:30:87.27:0,87,1105	0/0:27,0:27:81.23:0,81,1031	0/0:25,0:25:75.23:0,75,948	0/0:17,0:17:48.13:0,48,595	0/0:35,0:35:99:0,102,1292	0/0:29,0:29:87.27:0,87,1115	0/0:21,0:21:63.19:0,63,804	0/0:31,0:31:90.27:0,90,1142	0/0:29,0:29:87.28:0,87,1129	0/0:36,0:36:99:0,99,1285	0/0:19,0:19:57.19:0,57,740	0/0:24,0:24:69.22:0,69,882	0/0:29,0:29:84.26:0,84,1075	0/0:34,0:34:99:0,99,1269	0/0:32,0:32:93.30:0,93,1207	0/0:20,0:20:54.16:0,54,687	0/0:30,0:30:90.29:0,90,1168	0/0:18,0:18:54.18:0,54,701	0/0:33,0:33:96.30:0,96,1234	0/0:28,0:28:78.24:0,78,997	0/0:20,0:20:60.20:0,60,779
chr10	14477440	.	CTG	C	15000.58	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=7.655;DP=642;FS=5.192;HRun=0;HaplotypeScore=107.3729;InbreedingCoeff=0.9981;MQ=85.65;MQ0=0;MQRankSum=-7.436;QD=36.59;ReadPosRankSum=4.004;VQSLOD=7.0479;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:99:0,99,1773	1/1:0,8:8:21.07:294,21,0	0/0:31,0:31:87.10:0,87,1447	0/0:28,0:28:75.21:0,75,1229	1/1:2,15:17:39.13:545,39,0	1/1:0,17:17:45.15:630,45,0	1/1:2,30:32:72.24:1008,72,0	1/1:3,15:18:42.14:588,42,0	1/1:1,21:22:60.20:840,60,0	1/1:1,18:19:51.16:697,51,0	1/1:0,10:10:30.10:419,30,0	0/0:29,0:29:84.29:0,84,1500	0/0:21,0:21:63.22:0,63,1133	0/0:27,0:27:75.24:0,75,1315	1/1:1,32:33:90.30:1260,90,0	1/1:0,25:25:72.24:1008,72,0	1/1:1,33:34:96.32:1343,96,0	1/1:0,25:25:75.25:1050,75,0	1/1:5,18:23:54.17:739,54,0	1/1:1,17:18:48.16:671,48,0	1/1:5,40:45:99:1469,105,0	0/0:16,0:16:48.14:0,48,827	0/0:6,0:6:18.06:0,18,318	0/0:26,0:26:75.24:0,75,1319	0/0:15,0:15:42.14:0,42,755	1/1:2,28:30:81.24:1099,81,0	1/1:1,17:18:48.16:671,48,0	1/1:0,16:16:48.16:672,48,0
chr10	14486716	.	CT	C	8879.99	PASS	AB=0.957;AC=37;AF=0.661;AN=56;BaseQRankSum=6.087;DP=770;FS=0.000;HRun=11;HaplotypeScore=92.8731;InbreedingCoeff=0.9244;MQ=72.85;MQ0=0;MQRankSum=-0.511;QD=16.57;ReadPosRankSum=2.006;VQSLOD=5.4204;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:69.15:0,69,720	1/1:2,13:16:19.47:280,19,0	0/0:20,0:17:16.06:0,16,162	0/1:20,1:20:7.20:7,0,175	1/1:11,22:33:12.81:461,13,0	1/1:5,24:29:64.23:539,64,0	1/1:5,19:24:50.94:419,51,0	1/1:7,24:31:70.36:559,70,0	1/1:5,32:37:48.88:608,49,0	1/1:10,27:37:48.84:604,49,0	1/1:4,24:28:33.91:485,34,0	0/0:31,3:36:15.91:0,16,599	0/0:12,0:14:29.73:0,30,277	0/0:22,1:23:29.78:0,30,490	1/1:8,33:41:86.88:714,87,0	1/1:3,22:27:61:480,61,0	1/1:2,24:26:56.93:468,57,0	1/1:4,26:30:68.90:566,69,0	1/1:4,16:21:46.95:373,47,0	1/1:3,28:32:47.49:570,47,0	1/1:7,12:19:38.93:320,39,0	0/0:28,0:30:71.96:0,72,724	0/0:30,2:32:75.16:0,75,778	0/0:23,1:24:38.51:0,39,615	0/0:28,0:28:39.89:0,40,588	1/1:10,23:33:59.83:492,60,0	1/1:5,31:36:80.87:665,81,0	1/1:2,12:14:32.96:271,33,0
chr10	14486897	.	GCACA	G	1677.93	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.069;DP=773;FS=3.104;HRun=0;HaplotypeScore=125.6967;InbreedingCoeff=0.9994;MQ=74.27;MQ0=0;MQRankSum=-1.253;QD=34.96;ReadPosRankSum=1.726;VQSLOD=3.4090;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,102,2563	0/0:17,0:17:48.16:0,48,1231	0/0:24,0:20:47.66:0,48,1031	0/0:34,0:32:38.25:0,38,1426	0/0:19,0:19:54.19:0,54,1357	1/1:3,16:19:30.10:529,30,0	1/1:1,28:29:72.25:1270,72,0	0/0:42,0:42:99:0,108,2618	0/0:31,0:31:93.32:0,93,2365	0/0:24,0:24:60.21:0,60,1541	0/0:12,0:12:30.10:0,30,741	0/0:34,0:35:90.14:0,90,2235	0/0:28,0:28:75.26:0,75,1917	0/0:29,0:30:84.05:0,84,1996	0/0:40,0:40:99:0,111,2739	0/0:25,0:25:69.24:0,69,1762	0/0:32,0:32:81.28:0,81,2074	0/0:19,0:19:54.18:0,54,1312	0/0:16,0:16:39.13:0,39,995	0/0:22,0:22:57.20:0,57,1449	0/0:60,0:61:99:0,159,3975	0/0:25,0:25:63.22:0,63,1610	0/0:17,0:17:45.15:0,45,1130	0/0:34,0:34:96.30:0,96,2374	0/0:24,0:25:75.05:0,75,1860	0/0:27,0:27:75.26:0,75,1909	0/0:26,0:25:66.20:0,66,1580	0/0:19,0:17:51.18:0,51,1308
chr10	14491392	.	TCTCA	T	24750.24	PASS	AB=0.541;AC=47;AF=0.839;AN=56;BaseQRankSum=8.431;DP=667;FS=1.917;HRun=0;HaplotypeScore=136.3280;InbreedingCoeff=0.8575;MQ=75.20;MQ0=0;MQRankSum=-6.099;QD=43.35;ReadPosRankSum=4.698;VQSLOD=5.4931;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,36:39:99:1875,102,0	1/1:3,7:10:18.02:295,18,0	0/0:14,0:14:32.98:0,33,735	0/0:19,0:18:45.10:0,45,997	1/1:1,8:9:21.07:386,21,0	0/0:29,0:29:84.27:0,84,2159	0/0:34,0:34:96.30:0,96,2426	1/1:2,10:12:27.07:430,27,0	1/1:3,18:21:48.16:883,48,0	1/1:3,17:20:54.13:873,54,0	1/1:2,8:10:21.07:386,21,0	1/1:1,43:44:99:1932,105,0	1/1:0,20:20:54.10:923,54,0	1/1:1,39:40:99:1986,108,0	1/1:1,20:21:54.14:958,54,0	1/1:1,23:24:63.22:1159,63,0	1/1:2,24:26:63.22:1158,63,0	1/1:0,42:42:99:2207,120,0	1/1:5,23:28:66.22:1185,66,0	1/1:2,7:9:18.02:296,18,0	1/1:5,57:62:99:2448,135,0	1/1:2,17:19:36:591,36,0	1/1:1,11:12:24.04:406,24,0	0/1:6,34:40:56.08:1663,0,56	1/1:2,16:18:45.07:757,45,0	1/1:2,20:23:63.20:1127,63,0	1/1:3,9:14:30.10:550,30,0	1/1:2,6:8:15.05:275,15,0
chr10	14491394	.	TCA	T	5602.16	PASS	AB=1.000;AC=43;AF=0.768;AN=56;BaseQRankSum=12.911;DP=652;FS=9.645;HRun=0;HaplotypeScore=176.1650;InbreedingCoeff=0.3850;MQ=76.82;MQ0=0;MQRankSum=-4.192;QD=10.11;ReadPosRankSum=9.036;VQSLOD=2.8588;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:37,0:37:76.70:452,77,0	0/1:8,0:8:18.55:51,0,19	0/0:14,0:14:38.97:0,39,624	0/0:21,0:20:51.12:0,51,841	1/1:9,0:9:19.89:98,20,0	0/0:29,0:29:84.29:0,84,1605	0/0:34,0:34:99:0,102,1880	0/1:11,0:11:22.48:63,0,22	1/1:19,0:19:24.55:199,25,0	1/1:19,1:20:2.66:198,3,0	1/1:8,1:9:19.92:99,20,0	1/1:43,0:43:83.16:470,83,0	1/1:20,0:20:17.67:190,18,0	1/1:40,0:40:99:505,102,0	1/1:20,1:21:35.20:238,35,0	1/1:23,0:23:59.66:293,60,0	1/1:25,0:25:38.75:269,39,0	1/1:42,0:42:99:559,114,0	1/1:27,0:27:2.95:251,3,0	1/1:7,0:7:0.95:54,1,0	1/1:62,0:62:50.99:528,51,0	1/1:18,0:18:1.84:107,2,0	0/1:12,0:12:15.25:72,0,15	0/1:38,0:38:18.88:350,0,19	1/1:17,1:18:10.42:149,10,0	1/1:23,0:23:20.99:238,21,0	1/1:14,0:14:12.40:120,12,0	0/1:8,0:8:28.55:50,0,29
chr10	14491396	.	AC	A	1854.43	PASS	AB=0.990;AC=43;AF=0.768;AN=56;BaseQRankSum=13.316;DP=653;FS=4.542;HRun=1;HaplotypeScore=181.4751;InbreedingCoeff=0.4433;MQ=76.70;MQ0=0;MQRankSum=-8.278;QD=3.36;ReadPosRankSum=8.592;VQSLOD=-0.2060;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:41,0:41:24.76:138,25,0	1/1:7,0:7:9.05:26,9,0	0/0:13,0:13:39.11:0,39,570	0/0:22,1:22:57.19:0,57,888	1/1:9,0:9:12.72:36,13,0	0/0:29,0:29:84.29:0,84,1341	0/0:36,0:36:99:0,108,1695	0/1:12,0:12:13.86:14,0,40	1/1:18,0:18:29.07:83,29,0	0/1:20,0:20:32.39:32,0,51	1/1:9,0:9:12.72:36,13,0	1/1:44,0:44:41.72:158,42,0	1/1:21,0:21:29.01:84,29,0	1/1:41,0:41:44.51:164,45,0	1/1:21,0:21:13.93:69,14,0	1/1:23,0:23:38.16:109,38,0	1/1:25,0:25:39.97:114,40,0	1/1:42,0:42:72.68:209,73,0	1/1:24,0:24:4.12:70,4,0	1/1:7,0:7:9.05:26,9,0	1/1:62,0:62:60.82:211,61,0	1/1:17,0:17:18.72:53,19,0	0/1:12,0:12:9.20:21,0,9	0/1:36,1:38:30.57:123,0,31	1/1:18,0:18:23.56:68,24,0	1/1:20,1:21:38.61:116,39,0	1/1:10,2:12:0.59:64,1,0	0/1:8,0:8:10.37:10,0,34
chr10	14491872	.	G	GCGGCTGC	741.86	PASS	AC=4;AF=0.077;AN=52;BaseQRankSum=-0.506;DP=303;FS=3.522;HRun=0;HaplotypeScore=79.4117;InbreedingCoeff=0.5086;MQ=77.44;MQ0=1;MQRankSum=-4.773;QD=33.72;ReadPosRankSum=-0.699;VQSLOD=3.0258;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:30.10:0,30,727	0/0:5,0:5:6:0,6,98	0/0:4,0:4:5.98:0,6,50	0/0:8,0:9:19.47:0,19,242	0/0:2,0:2:3.01:0,3,74	1/1:5,1:7:3.01:114,3,0	1/1:4,10:15:21.07:733,21,0	0/0:9,0:9:12.03:0,12,202	0/0:8,0:8:21.07:0,21,482	0/0:8,0:8:24.08:0,24,591	0/0:5,0:5:5.95:0,6,81	0/0:16,0:16:48.15:0,48,1099	0/0:13,0:13:33.11:0,33,814	0/0:20,0:20:51.17:0,51,1201	0/0:3,0:3:9.03:0,9,222	0/0:14,0:14:39.13:0,39,892	0/0:24,0:24:63.22:0,63,1474	0/0:24,0:24:69.24:0,69,1665	0/0:5,0:4:6.02:0,6,91	./.	0/0:35,0:34:93.32:0,93,2250	0/0:8,0:8:3.01:0,3,74	./.	0/0:15,0:15:45.15:0,45,1039	0/0:15,0:15:21.07:0,21,482	0/0:6,0:6:6.02:0,6,113	0/0:8,0:8:18.06:0,18,443	0/0:3,0:3:3.01:0,3,74
chr10	14497121	.	TG	T	1210.12	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.253;DP=721;FS=2.036;HRun=4;HaplotypeScore=71.2453;InbreedingCoeff=0.9993;MQ=86.48;MQ0=1;MQRankSum=-2.711;QD=28.14;ReadPosRankSum=0.768;VQSLOD=3.2471;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,126,1703	0/0:11,0:11:33.11:0,33,462	0/0:22,0:22:44.36:0,44,696	0/0:28,1:29:42.75:0,43,798	0/0:20,0:20:57.18:0,57,781	1/1:0,21:21:57.17:684,57,0	1/1:1,21:22:54.17:648,54,0	0/0:33,0:33:93.31:0,93,1301	0/0:26,0:26:78.23:0,78,1056	0/0:31,0:31:87.27:0,87,1184	0/0:23,0:22:63.21:0,63,881	0/0:25,0:25:72.24:0,72,1008	0/0:19,0:19:57.17:0,57,780	0/0:40,0:40:99:0,120,1614	0/0:29,0:29:84.26:0,84,1143	0/0:26,0:26:72.24:0,72,1007	0/0:33,0:33:96.32:0,96,1333	0/0:20,0:20:57.18:0,57,781	0/0:18,0:18:51.14:0,51,676	0/0:17,0:17:48.14:0,48,630	0/0:47,0:47:99:0,135,1817	0/0:23,0:23:66.22:0,66,911	0/0:22,0:22:60.20:0,60,838	0/0:36,0:36:99:0,108,1476	0/0:21,0:21:60.17:0,60,792	0/0:36,0:36:99:0,99,1349	0/0:16,0:15:48.16:0,48,671	0/0:11,0:11:27.09:0,27,378
chr10	14498113	.	CAAGA	C	19379.83	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=10.116;DP=788;FS=12.453;HRun=0;HaplotypeScore=148.8253;InbreedingCoeff=0.9827;MQ=76.35;MQ0=0;MQRankSum=-4.662;QD=45.07;ReadPosRankSum=3.309;VQSLOD=5.2976;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,138,3586	1/1:0,9:9:18.06:335,18,0	0/0:19,0:19:50.85:0,51,1076	0/0:28,0:28:75.71:0,76,1689	1/1:4,17:21:38.19:725,38,0	0/0:20,0:20:57.20:0,57,1487	0/0:43,0:43:99:0,123,3111	1/1:1,28:29:84.25:1463,84,0	1/1:0,32:32:72.21:1343,72,0	1/1:3,18:21:54.19:1003,54,0	1/1:2,8:10:6.02:112,6,0	0/0:38,0:38:99:0,114,3031	0/0:36,0:36:99:0,102,2684	0/0:44,0:44:99:0,126,3301	1/1:2,32:34:90.31:1679,90,0	1/1:0,29:29:78.27:1452,78,0	1/1:3,34:37:84.29:1568,84,0	1/1:1,36:37:17.10:1656,17,0	1/1:3,17:20:51.17:946,51,0	1/1:1,9:10:30.10:559,30,0	1/1:5,60:65:99:2723,147,0	0/0:17,0:17:48.16:0,48,1248	0/0:11,0:11:27.09:0,27,712	0/0:34,0:34:96.33:0,96,2561	0/0:19,0:19:57.14:0,57,1362	1/1:1,35:36:99:1915,105,0	1/1:2,24:26:66.23:1232,66,0	1/1:0,14:14:36.12:670,36,0
chr10	14498443	.	CGTGTGTGT	C	1639.44	PASS	AB=0.777;AC=21;AF=0.404;AN=52;BaseQRankSum=2.105;DP=679;FS=21.592;HRun=0;HaplotypeScore=176.1845;InbreedingCoeff=0.4833;MQ=60.75;MQ0=11;MQRankSum=-6.945;QD=4.89;ReadPosRankSum=-1.193;VQSLOD=0.9751;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:28,6:34:0:0,0,0	0/0:8,0:11:8.83:0,9,62	./.	./.	0/0:12,1:18:11.98:0,12,99	1/1:11,0:21:6.02:112,6,0	1/1:15,0:21:0.47:1,0,0	0/0:25,0:25:12.87:0,13,168	0/0:19,0:21:6.38:0,6,68	0/0:18,0:18:12.03:0,12,199	0/0:11,0:11:3:0,3,25	1/1:28,11:39:23.95:484,24,0	1/1:11,7:18:17.72:418,18,0	1/1:22,13:37:23.75:514,24,0	0/0:17,0:24:11.17:0,11,220	0/1:19,0:30:17.16:17,0,299	0/0:17,0:25:35.98:0,36,377	0/0:13,0:19:26.97:0,27,252	0/0:14,0:14:1.25:0,1,3	0/0:8,0:8:3.01:0,3,44	0/0:67,0:80:41.61:0,42,498	0/1:10,7:16:0:0,0,0	1/1:7,3:10:0.30:1,0,0	1/1:31,11:43:5.59:130,6,0	1/1:17,7:27:5.53:104,6,0	0/1:21,0:24:6.82:7,0,48	0/1:7,0:12:3.83:4,0,66	0/0:13,0:15:2.99:0,3,24
chr10	14501638	.	A	AC	1086.37	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-8.591;DP=554;FS=5.397;HRun=6;HaplotypeScore=63.0210;InbreedingCoeff=0.8863;MQ=85.29;MQ0=0;MQRankSum=-1.589;QD=27.16;ReadPosRankSum=-0.289;VQSLOD=3.8833;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:84.15:0,84,848	0/0:5,0:5:15.03:0,15,153	0/0:17,0:17:35.47:0,35,287	0/0:19,0:19:4.37:0,4,219	0/0:5,0:5:12.02:0,12,122	1/1:1,12:12:33.11:415,33,0	1/1:4,23:27:63.20:792,63,0	0/0:22,0:22:51.10:0,51,516	0/0:25,0:25:69.15:0,69,704	0/0:18,0:18:45.07:0,45,448	0/0:5,0:5:15.02:0,15,147	0/0:29,0:29:81.16:0,81,819	0/0:26,0:26:75.14:0,75,756	0/0:23,0:23:57.12:0,57,581	0/0:27,0:27:78.16:0,78,789	0/0:28,0:28:75.15:0,75,758	0/0:31,0:31:87.20:0,87,887	0/0:24,0:24:66.15:0,66,673	0/0:22,0:22:57.12:0,57,581	0/0:5,0:5:12.02:0,12,122	0/0:40,0:40:99:0,102,1040	0/0:6,0:6:18.04:0,18,184	0/0:9,0:9:27.06:0,27,275	0/0:25,0:25:69.14:0,69,696	0/0:17,0:17:42.09:0,42,427	0/0:23,0:23:60.10:0,60,598	0/0:15,0:15:45.10:0,45,459	0/0:12,0:12:27.06:0,27,275
chr10	14502943	.	C	CTGTT	3198.42	PASS	AB=0.863;AC=15;AF=0.278;AN=54;BaseQRankSum=13.896;DP=804;FS=0.403;HRun=0;HaplotypeScore=232.8263;InbreedingCoeff=-0.3917;MQ=46.62;MQ0=29;MQRankSum=-14.301;QD=6.75;ReadPosRankSum=-7.073;VQSLOD=0.3920;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:23:57.20:0,57,1125	0/1:9,3:11:90.14:90,0,389	./.	0/0:22,0:2:6.02:0,6,96	0/1:36,8:45:68.68:69,0,1139	0/0:23,0:23:53.73:0,54,1036	0/0:33,0:31:66.20:0,66,1182	0/1:32,3:32:99:443,0,1095	0/1:23,4:24:95.71:96,0,716	0/1:46,6:52:99:598,0,1820	0/1:27,4:31:74.88:75,0,601	0/0:30,0:28:72.08:0,72,1358	0/0:20,0:19:44.66:0,45,885	0/0:22,0:21:50.94:0,51,949	0/1:25,11:37:99:267,0,880	0/1:34,7:38:99:618,0,963	0/1:32,4:34:26.65:27,0,1248	0/1:30,2:29:63.88:64,0,1415	0/1:17,3:12:99:170,0,285	0/1:17,2:21:67.96:68,0,317	0/0:35,0:30:81:0,81,1588	0/0:26,0:25:62.27:0,62,1243	0/0:17,0:15:36.12:0,36,705	0/0:37,0:35:57.75:0,58,1101	0/0:23,0:23:54.56:0,55,1134	0/1:25,3:27:99:311,0,1047	0/1:26,5:28:99:403,0,810	0/1:19,1:21:55.49:55,0,1018
chr10	14502973	.	GTC	G	418.59	PASS	AB=0.863;AC=9;AF=0.161;AN=56;BaseQRankSum=8.844;DP=737;FS=9.187;HRun=0;HaplotypeScore=182.2727;InbreedingCoeff=-0.1979;MQ=41.02;MQ0=48;MQRankSum=-9.376;QD=1.41;ReadPosRankSum=-1.033;VQSLOD=1.9878;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:22:21.07:0,21,360	0/0:9,2:9:12.93:0,13,214	0/0:9,0:2:6.02:0,6,105	0/0:14,0:3:9.03:0,9,158	0/0:31,4:32:42.16:0,42,713	0/0:24,0:21:30.57:0,31,464	0/0:32,0:28:12.04:0,12,207	0/1:35,3:31:35.80:36,0,931	0/1:29,3:27:8.49:8,0,512	0/1:41,2:39:95.57:96,0,1036	0/0:23,5:26:8.42:0,8,239	0/0:24,2:23:33.04:0,33,624	0/0:19,3:21:27.09:0,27,476	0/0:21,0:19:36.09:0,36,633	0/1:27,14:39:40.45:40,0,480	0/1:23,6:24:40.54:41,0,239	0/1:29,8:29:5.35:5,0,620	0/0:26,6:24:36.22:0,36,678	0/1:24,3:19:48.63:49,0,514	0/0:19,3:22:17.10:0,17,218	0/0:26,1:18:29.95:0,30,529	0/0:22,0:21:30.08:0,30,464	0/0:18,0:16:21.07:0,21,356	0/0:35,0:27:18.05:0,18,285	0/0:23,1:24:48.15:0,48,807	0/1:20,2:20:99:124,0,627	0/1:19,9:25:99:156,0,330	0/0:14,0:14:39.01:0,39,591
chr10	14502991	.	CTG	C	239.60	PASS	AB=1.000;AC=10;AF=0.179;AN=56;BaseQRankSum=6.675;DP=707;FS=11.388;HRun=0;HaplotypeScore=163.6619;InbreedingCoeff=0.0020;MQ=37.37;MQ0=57;MQRankSum=-6.383;QD=1.02;ReadPosRankSum=0.711;VQSLOD=2.1113;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,1:23:15.05:0,15,265	0/0:11,0:8:1.32:0,1,217	0/0:3,0:2:6.02:0,6,110	0/0:7,0:2:6.02:0,6,111	0/0:23,0:19:18.95:0,19,346	1/1:28,4:28:14.30:110,14,0	0/0:10,23:28:0:0,0,0	0/0:28,0:23:27.15:0,27,983	0/0:31,0:23:14.70:0,15,466	0/0:37,0:32:3.86:0,4,961	0/0:24,0:21:10.10:0,10,120	0/0:29,0:26:18.74:0,19,569	0/0:22,0:21:0.10:0,0,443	0/0:22,0:20:33.11:0,33,604	0/1:35,0:33:8.48:8,0,387	0/1:28,0:23:16.93:17,0,216	0/0:39,0:27:10.74:0,11,567	0/1:37,0:27:38.45:38,0,558	0/1:24,0:18:61.41:61,0,343	0/1:22,0:22:0.77:1,0,121	0/0:31,0:19:30.07:0,30,510	0/0:22,2:22:15.03:0,15,236	0/0:22,2:21:18.03:0,18,280	0/0:37,1:29:12.04:0,12,231	0/0:19,3:21:33.11:0,33,632	0/1:24,0:21:52.18:52,0,483	0/1:24,0:21:82.25:82,0,231	0/1:8,0:8:1.71:2,0,263
chr10	14502999	.	G	GTCTCTCTCTC	1972.04	PASS	AB=0.940;AC=43;AF=0.860;AN=50;BaseQRankSum=-1.412;DP=692;FS=0.000;HRun=0;HaplotypeScore=205.2706;InbreedingCoeff=0.1873;MQ=34.52;MQ0=72;MQRankSum=0.552;QD=3.20;ReadPosRankSum=-4.385;VQSLOD=1.4434;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	1/1:8,0:6:3.48:33,3,0	./.	./.	1/1:18,0:15:2.94:18,3,0	0/1:35,0:29:15.23:15,0,133	1/1:31,0:26:0.94:2,1,0	1/1:28,0:23:14.91:176,15,0	1/1:33,0:25:9.56:53,10,0	1/1:35,0:30:24.47:194,24,0	0/1:21,0:18:0.11:0,0,0	1/1:26,0:23:0.94:2,1,0	1/1:19,0:18:12.08:105,12,0	1/1:19,0:17:12.51:415,13,0	0/0:36,0:31:1.81:0,2,12	1/1:29,0:24:7.38:87,7,0	1/1:36,0:22:12.38:95,12,0	1/1:35,0:23:4.88:180,5,0	1/1:23,0:17:16.90:172,17,0	1/1:23,0:23:5.20:23,5,0	0/1:32,0:18:0:0,0,0	1/1:24,0:22:6.01:75,6,0	1/1:21,0:18:3.01:125,3,0	0/1:23,17:29:0:0,0,0	1/1:22,0:21:6.02:106,6,0	0/1:25,0:19:25.37:109,0,25	1/1:24,0:20:2.67:54,3,0	1/1:10,0:9:3.01:33,3,0
chr10	14503018	.	TCACACACACACACACACA	T	413.21	PASS	AB=0.954;AC=11;AF=0.324;AN=34;BaseQRankSum=2.259;DP=502;FS=14.880;HRun=0;HaplotypeScore=125.0836;InbreedingCoeff=0.3742;MQ=27.34;MQ0=84;MQRankSum=-0.223;QD=3.13;ReadPosRankSum=-1.495;VQSLOD=1.4099;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	1/1:7,0:5:0.47:1,0,0	./.	./.	./.	0/1:34,0:26:0:0,0,0	0/0:31,0:24:1.36:0,1,2	0/0:7,0:6:0:0,0,0	0/0:19,0:14:2.94:0,3,18	0/1:19,0:15:1.61:101,0,2	0/1:9,0:8:0:0,0,0	1/1:16,5:19:6.02:203,6,0	1/1:21,0:18:5.69:200,6,0	./.	./.	0/0:21,0:15:2.90:0,3,16	./.	0/0:28,0:14:6.38:0,6,149	0/0:11,0:9:3.90:0,4,71	0/0:13,0:16:5.09:0,5,97	./.	./.	1/1:16,2:15:0.29:1,0,0	./.	./.	0/0:17,0:10:11.82:0,12,108	0/0:16,0:13:2.97:0,3,20	0/0:9,0:4:4.17:0,4,20
chr10	14505619	.	C	CGTGT	3405.03	PASS	AB=0.880;AC=44;AF=0.880;AN=50;BaseQRankSum=-0.992;DP=611;FS=0.000;HRun=0;HaplotypeScore=155.7624;InbreedingCoeff=0.1289;MQ=57.74;MQ0=9;MQRankSum=0.011;QD=6.20;ReadPosRankSum=0.120;VQSLOD=2.4892;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:27:10.01:114,10,0	0/1:8,0:8:0:0,0,0	./.	./.	1/1:6,0:12:8.21:177,8,0	1/1:17,0:16:9.95:88,10,0	1/1:43,0:43:2.86:52,3,0	1/1:31,0:31:15.21:191,15,0	1/1:14,2:21:5.81:123,6,0	1/1:9,4:13:15.05:273,15,0	1/1:9,0:8:5.68:112,6,0	1/1:23,0:22:4.78:57,5,0	1/1:19,0:19:3.69:54,4,0	1/1:24,0:23:2.99:24,3,0	1/1:21,1:31:5.35:64,5,0	1/1:27,0:27:17.99:387,18,0	0/1:25,3:40:9.21:447,0,9	1/1:15,5:21:18.02:308,18,0	1/1:13,3:16:10.79:149,11,0	0/1:9,1:9:0:0,0,0	1/1:58,12:73:6.02:142,6,0	1/1:8,0:8:3.01:35,3,0	./.	1/1:23,0:23:3.01:30,3,0	0/0:13,0:13:2.50:0,2,9	1/1:30,0:30:30.19:445,30,0	0/1:13,2:14:13.03:63,0,13	1/1:1,2:3:3.01:71,3,0
chr10	14505659	.	T	TGTGTGTGTGTGG	2910.93	PASS	AB=1.000;AC=27;AF=0.482;AN=56;BaseQRankSum=3.842;DP=520;FS=5.234;HRun=0;HaplotypeScore=155.7911;InbreedingCoeff=0.2249;MQ=64.40;MQ0=15;MQRankSum=-0.117;QD=10.00;ReadPosRankSum=-0.758;VQSLOD=2.4097;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:35,0:34:70:570,70,0	0/0:8,0:8:8.93:0,9,67	0/0:38,0:12:29.14:0,29,304	0/0:48,0:20:31.53:0,32,383	0/1:12,0:12:73.87:133,0,74	1/1:0,8:12:11.90:355,12,0	1/1:1,13:20:3.01:189,3,0	0/1:20,0:20:41.03:41,0,389	0/0:20,0:20:28.65:0,29,363	0/1:13,0:12:46.26:46,0,183	0/1:6,0:7:30.91:31,0,56	1/1:24,0:25:45.73:484,46,0	1/1:0,15:17:3.01:188,3,0	1/1:7,0:7:20.96:198,21,0	0/0:28,0:28:28.53:0,29,383	0/1:17,0:17:99:237,0,153	0/1:34,0:34:59.84:60,0,467	0/1:12,0:12:39.99:40,0,138	0/1:14,0:14:36.07:36,0,205	0/0:6,0:5:8.98:0,9,72	0/0:40,0:40:69.61:0,70,532	1/1:5,0:5:9.01:112,9,0	1/1:12,0:12:23.40:176,23,0	0/0:0,0:24:0.47:0,0,1	1/1:6,0:6:5.99:50,6,0	0/1:23,0:23:99:151,0,329	0/0:14,0:13:14.20:0,14,157	0/0:3,0:3:5.93:0,6,41
chr10	14505930	.	G	GAGC	5733.09	PASS	AC=18;AF=0.346;AN=52;BaseQRankSum=-8.629;DP=365;FS=19.906;HRun=0;HaplotypeScore=48.2525;InbreedingCoeff=0.9113;MQ=58.46;MQ0=5;MQRankSum=-5.145;QD=52.60;ReadPosRankSum=4.210;VQSLOD=4.6575;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,15:17:42.14:992,42,0	./.	0/0:25,0:20:54.18:0,54,936	0/0:34,0:21:48.10:0,48,740	0/0:2,0:2:6.02:0,6,106	1/1:1,10:11:27.09:637,27,0	1/1:3,11:15:30.10:708,30,0	0/0:26,0:26:69.24:0,69,1199	0/0:11,0:11:27.08:0,27,447	0/0:5,0:5:15.05:0,15,265	0/0:1,0:1:3.01:0,3,53	1/1:0,14:14:39.13:922,39,0	1/1:0,9:9:24.08:566,24,0	1/1:3,9:12:21.07:496,21,0	0/0:20,0:20:57.18:0,57,965	0/0:9,0:9:27.09:0,27,476	0/0:18,0:18:48.16:0,48,847	0/0:29,0:29:81.28:0,81,1417	0/0:16,0:16:42.14:0,42,741	0/0:4,0:4:12.04:0,12,212	0/0:42,0:41:99:0,114,1944	./.	1/1:0,7:7:18.06:421,18,0	1/1:1,16:17:27.09:638,27,0	1/1:1,6:7:15.05:354,15,0	0/0:6,0:6:18.06:0,18,295	0/0:6,0:6:15.05:0,15,265	0/0:1,0:1:3.01:0,3,53
chr10	14507914	.	T	TGATA	16110.44	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-12.944;DP=735;FS=1.346;HRun=0;HaplotypeScore=111.6538;InbreedingCoeff=0.9997;MQ=66.23;MQ0=0;MQRankSum=-4.872;QD=62.44;ReadPosRankSum=4.680;VQSLOD=6.9692;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,37:42:99:2634,99,0	0/0:11,0:11:30.09:0,30,528	0/0:26,0:26:72.25:0,72,1322	0/0:29,0:24:51.18:0,51,1034	0/0:18,0:18:42.13:0,42,752	1/1:3,21:24:66.23:1721,66,0	1/1:7,23:32:72.25:1915,72,0	0/0:23,0:23:63.21:0,63,1134	0/0:33,0:33:93.29:0,93,1665	0/0:26,0:26:78.27:0,78,1449	0/0:16,0:16:42.14:0,42,784	1/1:6,30:37:87.30:2303,87,0	1/1:3,19:23:60.21:1578,60,0	1/1:3,23:26:63.22:1622,63,0	0/0:29,0:29:78.27:0,78,1439	0/0:37,0:37:99:0,108,1945	0/0:27,0:27:75.26:0,75,1378	0/0:30,0:30:90.27:0,90,1601	0/0:26,0:26:78.27:0,78,1446	0/0:21,0:21:60.21:0,60,1096	0/0:51,0:51:99:0,144,2667	1/1:2,14:16:39.13:1019,39,0	1/1:2,13:15:30.09:799,30,0	1/1:5,23:28:57.19:1518,57,0	1/1:4,11:15:39.13:1001,39,0	0/0:37,0:37:93.31:0,93,1698	0/0:25,0:25:75.26:0,75,1373	0/0:12,0:12:30.10:0,30,560
chr10	14512920	.	AG	A	1034.33	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=9.587;DP=564;FS=10.139;HRun=6;HaplotypeScore=50.6173;InbreedingCoeff=0.8952;MQ=49.73;MQ0=12;MQRankSum=-7.705;QD=6.85;ReadPosRankSum=-2.108;VQSLOD=-0.6012;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,18:18:8.97:83,9,0	0/0:8,0:8:21.07:0,21,276	0/0:15,0:2:6.02:0,6,67	0/0:23,0:4:9.03:0,9,114	0/0:16,0:16:41.69:0,42,551	1/1:2,13:15:21.05:225,21,0	1/1:0,14:13:18.05:193,18,0	0/0:32,0:24:63.17:0,63,810	0/0:14,0:14:42.12:0,42,537	0/0:27,0:27:78.24:0,78,1009	0/0:21,0:21:54.17:0,54,701	1/1:1,13:13:6.01:64,6,0	1/1:1,14:14:12.03:129,12,0	1/1:4,13:17:8.90:69,9,0	0/0:23,0:23:60.17:0,60,760	0/0:25,0:25:69.11:0,69,892	0/0:40,0:40:99:0,105,1363	0/0:34,0:34:93.24:0,93,1185	0/0:23,0:17:51.15:0,51,643	0/0:21,0:21:53.68:0,54,702	0/0:40,0:40:99:0,105,1365	1/1:1,26:22:20.95:198,21,0	1/1:0,11:10:9.02:97,9,0	1/1:1,5:4:3.01:32,3,0	1/1:1,10:11:15:149,15,0	0/0:26,0:26:72.23:0,72,946	0/0:17,0:17:45.15:0,45,592	0/0:7,0:6:18.06:0,18,237
chr10	14515314	.	T	TA	11146.83	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-10.564;DP=684;FS=16.396;HRun=2;HaplotypeScore=80.5719;InbreedingCoeff=0.9975;MQ=80.79;MQ0=0;MQRankSum=-2.378;QD=41.13;ReadPosRankSum=3.913;VQSLOD=3.0360;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,45:46:99:1843,123,0	0/0:15,0:15:45.15:0,45,584	0/0:14,0:14:42.01:0,42,495	0/0:28,0:28:69.13:0,69,915	0/0:20,0:20:48.15:0,48,623	1/1:0,23:23:66.22:988,66,0	1/1:2,27:29:78.26:1169,78,0	0/0:31,0:31:90.28:0,90,1154	0/0:20,0:20:60.19:0,60,778	0/0:24,0:24:69.22:0,69,884	0/0:10,0:10:27.07:0,27,335	1/1:1,37:38:99:1618,108,0	1/1:0,26:26:78.26:1169,78,0	1/1:2,20:22:54.18:809,54,0	0/0:42,0:42:99:0,117,1519	0/0:35,0:35:99:0,102,1323	0/0:29,0:29:78.25:0,78,1012	0/0:20,0:20:57.19:0,57,740	0/0:21,0:21:60.17:0,60,752	0/0:17,0:17:51.12:0,51,640	0/0:28,0:28:84.27:0,84,1089	1/1:0,18:18:51.17:763,51,0	1/1:1,23:24:60.20:898,60,0	1/1:0,27:27:78.26:1169,78,0	1/1:0,18:18:48.16:720,48,0	0/0:31,0:31:93.27:0,93,1169	0/0:23,0:23:69.18:0,69,863	0/0:5,0:5:15.05:0,15,195
chr10	14516241	.	TA	T	5942.63	PASS	AB=0.653;AC=46;AF=0.821;AN=56;BaseQRankSum=-0.221;DP=664;FS=3.156;HRun=14;HaplotypeScore=78.3512;InbreedingCoeff=0.0344;MQ=75.30;MQ0=3;MQRankSum=0.269;QD=9.39;ReadPosRankSum=4.202;VQSLOD=4.5532;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,27:39:6.97:280,7,0	1/1:3,7:10:11.74:82,12,0	0/0:31,0:17:19.60:0,20,162	0/1:26,0:20:20.53:21,0,74	1/1:2,15:17:29.16:184,29,0	1/1:3,16:20:46.64:314,47,0	1/1:9,27:39:21.81:414,22,0	1/1:10,18:28:28.87:315,29,0	1/1:7,14:22:31.72:211,32,0	1/1:5,17:22:43.36:291,43,0	0/1:3,5:9:4.54:54,0,5	1/1:6,18:25:36.21:266,36,0	0/1:6,22:28:19.22:152,0,19	1/1:7,20:30:14.85:230,15,0	1/1:5,17:23:34.75:232,35,0	1/1:4,17:23:41.83:291,42,0	0/1:10,22:34:13.53:331,0,14	1/1:4,24:28:58.57:396,59,0	0/1:13,16:29:30.44:215,0,30	0/1:9,13:22:38.40:123,0,38	1/1:6,22:28:40.20:271,40,0	0/1:5,7:12:10.15:80,0,10	1/1:4,8:14:7.91:115,8,0	1/1:6,29:38:52.20:483,52,0	0/1:4,11:15:1.08:136,0,1	1/1:8,18:26:48.48:312,48,0	1/1:7,8:15:14.83:103,15,0	1/1:8,3:11:5.82:41,6,0
chr10	14517145	.	T	TTC	11793.40	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-14.599;DP=621;FS=0.000;HRun=0;HaplotypeScore=69.3169;InbreedingCoeff=0.9991;MQ=72.85;MQ0=0;MQRankSum=-1.022;QD=49.55;ReadPosRankSum=1.523;VQSLOD=5.8740;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,41:42:99:2144,111,0	0/0:10,0:10:27.09:0,27,411	0/0:12,0:12:33.02:0,33,476	0/0:11,0:11:21.07:0,21,289	0/0:27,0:27:75.24:0,75,1127	1/1:0,16:16:48.16:927,48,0	1/1:0,35:35:87.28:1681,87,0	0/0:24,0:24:63.20:0,63,925	0/0:21,0:21:63.21:0,63,965	0/0:16,0:16:48.16:0,48,735	0/0:15,0:15:39.13:0,39,594	1/1:1,22:24:57.19:1092,57,0	1/1:0,22:23:63.22:1216,63,0	1/1:0,19:19:51.17:983,51,0	0/0:24,0:24:69.22:0,69,1034	0/0:34,0:34:99:0,99,1512	0/0:38,0:38:99:0,114,1745	0/0:25,0:25:72.20:0,72,1067	0/0:15,0:15:42.14:0,42,643	0/0:22,0:22:63.21:0,63,964	0/0:33,0:33:96.31:0,96,1448	1/1:2,21:23:54.18:1033,54,0	1/1:2,13:15:33.11:632,33,0	1/1:1,21:22:57.20:1101,57,0	1/1:0,19:19:51.17:984,51,0	0/0:22,0:22:66.22:0,66,1011	0/0:22,0:22:66.22:0,66,1003	0/0:12,0:12:33.11:0,33,505
chr10	14517278	.	T	TCA	34097.60	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-9.045;DP=751;FS=2.004;HRun=0;HaplotypeScore=75.8048;InbreedingCoeff=0.9998;MQ=82.62;MQ0=1;MQRankSum=-10.855;QD=48.43;ReadPosRankSum=5.931;VQSLOD=6.0348;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,37:40:93.32:1724,93,0	1/1:1,15:16:42.14:786,42,0	0/0:22,0:22:62.98:0,63,858	0/0:25,0:25:63.16:0,63,867	1/1:1,20:23:69.24:1260,69,0	1/1:0,16:16:42.14:784,42,0	1/1:0,28:28:75.26:1400,75,0	1/1:3,29:33:90.17:1419,90,0	1/1:1,25:26:63.22:1175,63,0	1/1:0,25:25:75.26:1390,75,0	1/1:0,21:20:48.16:883,48,0	1/1:1,32:35:87.30:1625,87,0	1/1:1,31:32:84.29:1562,84,0	1/1:2,20:24:60.21:1115,60,0	1/1:0,28:28:78.27:1453,78,0	1/1:0,29:29:75.26:1402,75,0	1/1:2,26:29:78.27:1438,78,0	1/1:2,20:22:57.20:1067,57,0	1/1:2,18:23:63.06:1008,63,0	1/1:0,20:20:54.19:1010,54,0	1/1:0,47:47:99:2471,132,0	1/1:1,31:33:84.29:1573,84,0	1/1:1,21:22:63.22:1178,63,0	1/1:0,33:33:87.30:1623,87,0	1/1:0,28:29:78.27:1458,78,0	1/1:1,28:29:81.18:1443,81,0	1/1:3,24:28:66.23:1232,66,0	1/1:0,11:11:33.11:618,33,0
chr10	14517435	.	A	ACCAGCAATGC	62297.62	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-6.339;DP=615;FS=0.767;HRun=0;HaplotypeScore=125.0895;InbreedingCoeff=0.8657;MQ=63.98;MQ0=0;MQRankSum=-8.409;QD=106.13;ReadPosRankSum=3.727;VQSLOD=5.4845;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,24:38:75.19:3699,75,0	1/1:1,3:5:12.04:645,12,0	0/0:14,0:14:36.08:0,36,921	0/0:14,0:14:39.04:0,39,1032	1/1:5,1:10:14.98:491,15,0	1/1:3,13:21:48.16:2407,48,0	1/1:1,11:23:36.12:1911,36,0	1/1:18,15:43:99:5526,120,0	1/1:3,15:21:57.20:2955,57,0	1/1:2,4:9:26.97:942,27,0	1/1:3,2:6:6.02:242,6,0	1/1:6,31:43:99:5485,105,0	1/1:7,13:28:60.21:2990,60,0	1/1:3,19:28:57.20:3023,57,0	1/1:8,26:46:93.32:4865,93,0	1/1:6,20:31:78.27:4077,78,0	1/1:4,15:27:51.11:2441,51,0	1/1:7,6:18:36.12:1802,36,0	1/1:10,7:23:69.24:2886,69,0	1/1:3,5:12:15.01:665,15,0	1/1:12,13:36:51.99:2149,52,0	1/1:1,5:10:18.06:889,18,0	1/1:2,1:6:9.03:306,9,0	1/1:5,8:21:30.10:1428,30,0	1/1:3,7:15:30.10:1612,30,0	1/1:8,17:32:93.31:4204,93,0	1/1:0,24:30:78.27:4189,78,0	1/1:1,2:5:9.03:466,9,0
chr10	14518146	.	GA	G	1592.71	PASS	AB=0.755;AC=45;AF=0.833;AN=54;BaseQRankSum=1.887;DP=311;FS=1.363;HRun=13;HaplotypeScore=57.3472;InbreedingCoeff=-0.0110;MQ=36.14;MQ0=33;MQRankSum=-1.707;QD=5.31;ReadPosRankSum=-0.374;VQSLOD=1.6623;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,0:9:1.89:6,2,0	1/1:2,4:6:7.94:50,8,0	0/1:4,0:2:0.01:0,0,0	./.	1/1:7,5:6:5.94:44,6,0	1/1:1,0:6:8.14:24,8,0	1/1:8,0:10:10.63:33,11,0	1/1:8,7:10:16.91:115,17,0	0/1:7,6:11:8.27:110,0,8	1/1:7,7:10:17.89:132,18,0	1/1:4,4:4:7.99:50,8,0	1/1:2,0:2:3.28:9,3,0	1/1:4,0:12:7.92:23,8,0	0/1:7,0:5:1.46:1,0,4	0/1:6,2:6:30.57:31,0,63	1/1:1,5:5:14.91:109,15,0	1/1:7,12:19:7.71:201,8,0	1/1:5,10:11:23.83:175,24,0	1/1:8,5:11:17.82:127,18,0	0/1:5,7:11:8.35:108,0,8	1/1:1,3:4:2.94:22,3,0	0/1:3,0:5:1.12:6,0,1	1/1:7,0:4:2.02:6,2,0	1/1:7,0:6:2.03:6,2,0	1/1:5,0:10:14.97:49,15,0	0/1:8,8:14:3.36:133,0,3	0/1:12,4:12:37.57:88,0,38	0/1:3,3:4:17.07:54,0,17
chr10	14518155	.	A	AAG	39.86	PASS	AB=0.988;AC=14;AF=0.250;AN=56;BaseQRankSum=2.576;DP=392;FS=0.000;HRun=0;HaplotypeScore=92.8915;InbreedingCoeff=0.3588;MQ=40.13;MQ0=32;MQRankSum=-1.891;QD=0.31;ReadPosRankSum=-0.182;VQSLOD=1.2590;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:11:11.48:11,0,16	0/0:10,0:9:26.87:0,27,208	1/1:15,0:2:2.92:8,3,0	0/1:25,0:3:4.52:5,0,15	0/0:18,0:14:26.77:0,27,204	0/0:11,0:9:8.36:0,8,21	0/1:12,1:11:2.66:47,0,3	0/0:23,0:15:41.86:0,42,340	0/0:13,0:11:26.96:0,27,237	0/0:14,0:13:32.90:0,33,266	0/0:15,0:12:20.83:0,21,149	1/1:4,0:3:0.05:12,0,0	0/1:10,0:9:3.69:28,0,4	1/1:4,1:5:0.10:7,0,0	0/0:9,0:9:17.95:0,18,174	0/0:13,0:12:32.88:0,33,263	0/0:22,0:20:50.80:0,51,415	0/0:16,0:13:29.87:0,30,238	0/0:17,0:15:41.88:0,42,337	0/0:18,0:18:50.74:0,51,401	0/0:5,0:5:11.96:0,12,98	0/1:7,0:7:0.85:8,0,1	0/0:8,0:7:2.29:0,2,6	1/1:7,2:7:2.77:34,3,0	0/1:12,0:11:15.88:17,0,16	0/0:28,0:26:74.82:0,75,625	0/0:15,0:12:35.83:0,36,306	0/0:7,0:6:17.99:0,18,166
chr10	14518168	.	AAAAAG	A	2889.41	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=9.719;DP=465;FS=65.512;HRun=0;HaplotypeScore=123.2411;InbreedingCoeff=0.9034;MQ=42.15;MQ0=34;MQRankSum=-10.630;QD=26.03;ReadPosRankSum=1.268;VQSLOD=1.1369;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,20:13:30.05:480,30,0	0/0:13,0:12:36.12:0,36,873	0/0:25,0:2:3:0,3,27	0/0:31,0:6:0.57:0,1,104	0/0:26,0:22:60.19:0,60,1326	1/1:1,10:9:21.07:400,21,0	1/1:5,5:9:21.07:349,21,0	0/0:31,0:22:62.57:0,63,1319	0/0:17,0:15:39.11:0,39,876	0/0:21,0:20:56:0,56,1224	0/0:17,0:15:33.11:0,33,785	1/1:4,2:5:7.27:101,7,0	1/1:7,5:11:18.06:286,18,0	1/1:3,3:5:11.83:180,12,0	0/0:14,0:14:36.12:0,36,777	0/0:13,0:12:33.11:0,33,844	0/0:23,0:22:57.18:0,57,1408	0/0:16,0:13:36.12:0,36,915	0/0:23,0:20:57.19:0,57,1294	0/0:21,0:21:63.21:0,63,1351	0/0:7,0:7:21.07:0,21,503	1/1:1,5:6:18.03:302,18,0	1/1:1,6:6:18.06:293,18,0	1/1:7,2:7:7.27:112,7,0	1/1:6,9:14:33.11:596,33,0	0/0:27,0:25:75.26:0,75,1983	0/0:16,0:13:36.07:0,36,851	0/0:13,0:13:39.13:0,39,770
chr10	14518194	.	AAAAG	A	11337.15	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-1.091;DP=563;FS=30.140;HRun=0;HaplotypeScore=113.7097;InbreedingCoeff=0.8010;MQ=48.06;MQ0=12;MQRankSum=-2.009;QD=22.19;ReadPosRankSum=3.916;VQSLOD=2.9329;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:29:23.98:208,24,0	1/1:5,8:13:24.03:372,24,0	0/0:25,0:3:9.03:0,9,187	0/0:26,0:9:9.03:0,9,187	1/1:7,22:28:59.42:961,59,0	1/1:9,0:15:23.36:205,23,0	1/1:5,0:20:21.30:123,21,0	1/1:15,24:36:69.08:862,69,0	1/1:6,9:14:27.01:422,27,0	1/1:4,19:23:60.12:928,60,0	1/1:4,25:29:62.93:888,63,0	1/1:1,0:10:6.01:56,6,0	1/1:4,0:11:17.95:152,18,0	1/1:9,0:10:10.16:98,10,0	1/1:4,11:15:24.08:402,24,0	1/1:4,9:13:21.02:323,21,0	1/1:10,14:23:33.09:528,33,0	1/1:6,14:19:26.65:393,27,0	1/1:8,10:17:15.26:451,15,0	1/1:6,21:27:54.18:909,54,0	1/1:1,11:12:15.05:253,15,0	1/1:4,0:13:16.12:108,16,0	1/1:9,0:12:16.69:135,17,0	1/1:9,0:9:8.96:72,9,0	1/1:0,0:24:30.02:274,30,0	1/1:6,28:34:87.23:1305,87,0	1/1:6,8:14:17.20:302,17,0	1/1:2,13:13:36.12:608,36,0
chr10	14520964	.	T	TA	3913.46	PASS	AB=0.583;AC=19;AF=0.339;AN=56;BaseQRankSum=7.040;DP=533;FS=0.816;HRun=9;HaplotypeScore=61.6888;InbreedingCoeff=0.8680;MQ=68.25;MQ0=0;MQRankSum=-0.237;QD=22.24;ReadPosRankSum=1.421;VQSLOD=4.4650;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,26:31:66.18:730,66,0	0/0:9,0:9:17.99:0,18,156	0/0:9,0:8:8.96:0,9,75	0/0:8,0:7:2.84:0,3,26	0/0:37,0:37:94.94:0,95,799	1/1:2,19:21:57.15:631,57,0	1/1:3,11:14:7.01:292,7,0	0/0:26,0:26:65.95:0,66,568	0/0:20,0:20:44.98:0,45,391	0/0:21,0:21:44.97:0,45,391	0/0:22,0:22:56.96:0,57,491	1/1:2,15:17:36.10:398,36,0	0/1:6,15:21:13.02:316,0,13	1/1:3,14:17:33.09:365,33,0	0/0:24,0:24:65.93:0,66,565	0/0:17,0:17:44.93:0,45,384	0/0:20,0:20:47.98:0,48,416	0/0:25,0:24:68.96:0,69,595	0/0:23,0:23:50.98:0,51,443	0/0:19,0:19:47.97:0,48,417	0/0:9,0:9:23.98:0,24,204	1/1:2,8:10:15.04:166,15,0	1/1:2,8:10:18.05:199,18,0	1/1:1,8:9:15.04:166,15,0	1/1:4,22:26:60.12:650,60,0	0/0:29,0:29:71.92:0,72,615	0/0:25,0:25:71.99:0,72,625	0/0:13,0:13:38.99:0,39,339
chr10	14522043	.	A	AT	3603.01	PASS	AB=0.845;AC=23;AF=0.411;AN=56;BaseQRankSum=-5.672;DP=589;FS=14.245;HRun=11;HaplotypeScore=62.3815;InbreedingCoeff=0.4459;MQ=68.42;MQ0=0;MQRankSum=-0.019;QD=11.59;ReadPosRankSum=-0.028;VQSLOD=1.3792;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,38:47:58.24:910,58,0	0/0:4,0:5:0.06:0,0,78	0/1:15,0:14:6.25:6,0,105	0/1:8,0:6:10.47:20,0,10	0/0:19,1:20:8.33:0,8,240	1/1:5,9:14:27.05:274,27,0	1/1:10,23:33:24.86:434,25,0	0/0:24,4:29:13.31:0,13,412	0/0:18,0:18:50.80:0,51,395	0/0:23,0:24:49.81:0,50,376	0/0:18,2:20:9.28:0,9,188	1/1:4,18:23:34.42:347,34,0	1/1:6,18:25:41.95:394,42,0	1/1:5,16:22:29.89:288,30,0	0/0:27,2:32:53.37:0,53,567	0/0:23,1:26:28.34:0,28,393	0/0:21,0:21:53.73:0,54,414	0/1:9,2:11:31.04:31,0,149	0/0:19,0:20:24.12:0,24,273	0/0:13,0:13:26.87:0,27,209	0/1:21,2:23:13.11:13,0,275	1/1:5,8:14:4.04:182,4,0	1/1:3,10:13:8.98:253,9,0	0/1:7,14:21:16.41:214,0,16	0/1:8,11:19:13.43:234,0,13	0/0:25,0:26:52.51:0,53,387	0/0:23,1:24:32.09:0,32,420	0/1:20,2:21:4.12:4,0,334
chr10	14522363	.	T	TAA	4018.51	PASS	AB=0.828;AC=45;AF=0.833;AN=54;BaseQRankSum=-1.529;DP=508;FS=6.644;HRun=19;HaplotypeScore=107.4339;InbreedingCoeff=0.4569;MQ=61.44;MQ0=4;MQRankSum=-2.599;QD=9.07;ReadPosRankSum=0.254;VQSLOD=0.5574;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:12,14:26:8.58:67,0,9	1/1:9,0:8:14.18:106,14,0	0/0:37,0:13:6.14:0,6,52	0/0:19,0:10:2.92:0,3,9	1/1:27,0:26:34.28:279,34,0	0/1:11,0:12:19.24:19,0,56	0/0:8,0:9:5.24:0,5,33	1/1:31,0:30:37.10:282,37,0	1/1:7,0:15:4.55:30,5,0	1/1:35,0:35:63.25:424,63,0	1/1:19,0:19:37.26:277,37,0	1/1:16,0:16:26.92:232,27,0	1/1:9,6:15:8.87:71,9,0	1/1:14,0:14:14.13:121,14,0	1/1:16,0:16:20.97:176,21,0	1/1:29,0:29:60.90:439,61,0	1/1:17,0:17:2.98:21,3,0	1/1:18,0:18:34.90:249,35,0	1/1:17,0:18:18.87:128,19,0	1/1:19,0:19:23.40:173,23,0	1/1:12,0:12:20.59:150,21,0	./.	1/1:5,0:5:3.01:32,3,0	0/1:4,0:5:0:0,0,0	1/1:20,0:20:20.18:149,20,0	1/1:27,0:27:47.42:337,47,0	1/1:17,0:17:15.44:128,15,0	1/1:20,0:19:23.36:126,23,0
chr10	14522372	.	A	AAAAA	6644.79	PASS	AB=1.000;AC=49;AF=0.875;AN=56;BaseQRankSum=-3.631;DP=528;FS=6.303;HRun=10;HaplotypeScore=91.3481;InbreedingCoeff=0.2914;MQ=62.34;MQ0=4;MQRankSum=-1.025;QD=12.80;ReadPosRankSum=-2.284;VQSLOD=0.8816;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:27:17.86:51,0,18	1/1:8,0:7:14.98:172,15,0	0/1:38,0:10:9.53:10,0,83	0/1:25,0:14:0.36:0,0,3	1/1:27,0:26:39.82:422,40,0	0/1:14,0:14:33.92:34,0,92	0/0:9,0:9:5.45:0,5,56	1/1:29,0:28:41.45:444,41,0	1/1:17,0:17:6.75:45,7,0	1/1:36,0:36:66.71:717,67,0	1/1:22,0:22:36:461,36,0	1/1:17,0:17:27.67:286,28,0	1/1:16,0:15:2.80:14,3,0	1/1:14,0:14:11.60:93,12,0	1/1:16,0:16:23.10:339,23,0	1/1:30,0:30:60.10:948,60,0	1/1:9,11:21:7.57:100,8,0	1/1:17,0:17:33.05:455,33,0	1/1:18,0:18:11.16:58,11,0	1/1:15,0:15:22.05:231,22,0	1/1:13,0:13:21.02:259,21,0	1/1:3,0:3:0.47:1,0,0	1/1:3,0:3:3.01:33,3,0	0/1:6,0:6:0:1,0,0	1/1:23,0:23:20.66:200,21,0	1/1:25,0:25:53.95:725,54,0	1/1:19,0:18:16.76:223,17,0	1/1:20,0:19:25.87:325,26,0
chr10	14526987	.	ACTT	A	1677.52	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.187;DP=722;FS=18.955;HRun=0;HaplotypeScore=97.4043;InbreedingCoeff=0.9999;MQ=77.59;MQ0=0;MQRankSum=-1.711;QD=45.34;ReadPosRankSum=0.714;VQSLOD=3.9847;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:90.31:0,90,2101	0/0:17,0:17:51.18:0,51,1205	0/0:20,0:20:51.17:0,51,1172	0/0:18,0:18:54.18:0,54,1214	0/0:29,0:29:84.25:0,84,1925	1/1:0,23:23:66.23:1164,66,0	1/1:1,13:14:36.12:635,36,0	0/0:41,0:41:99:0,117,2702	0/0:23,0:23:69.24:0,69,1632	0/0:29,0:29:87.30:0,87,2056	0/0:17,0:17:51.18:0,51,1198	0/0:33,0:33:99:0,99,2337	0/0:28,0:28:84.29:0,84,1923	0/0:32,0:32:96.33:0,96,2259	0/0:49,0:49:99:0,148,3428	0/0:48,0:48:99:0,144,3251	0/0:25,0:25:75.26:0,75,1739	0/0:15,0:15:45.15:0,45,1022	0/0:25,0:24:66.20:0,66,1450	0/0:26,0:26:78.23:0,78,1793	0/0:31,0:31:93.32:0,93,2170	0/0:26,0:26:75.24:0,75,1682	0/0:20,0:20:57.20:0,57,1347	0/0:15,0:15:45.15:0,45,1064	0/0:26,0:26:75.25:0,75,1715	0/0:23,0:23:69.24:0,69,1630	0/0:26,0:25:78.27:0,78,1834	0/0:13,0:13:39.09:0,39,782
chr10	14527145	.	TA	T	10815.30	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-5.849;DP=520;FS=0.752;HRun=9;HaplotypeScore=74.8228;InbreedingCoeff=0.9845;MQ=69.09;MQ0=3;MQRankSum=-3.846;QD=23.06;ReadPosRankSum=5.645;VQSLOD=5.1673;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,9:10:26.95:238,27,0	1/1:2,6:8:18.01:164,18,0	0/0:31,0:23:41.46:0,41,419	0/0:19,0:14:32.36:0,32,278	1/1:5,29:33:81:733,81,0	1/1:5,9:14:35.67:292,36,0	1/1:4,10:14:36.02:329,36,0	1/1:4,22:26:66.01:599,66,0	1/1:5,7:12:23.99:216,24,0	1/1:8,32:40:99:977,108,0	1/1:3,15:18:44.97:404,45,0	1/1:1,9:9:26.96:237,27,0	1/1:5,12:17:45.01:407,45,0	1/1:3,6:9:21.01:192,21,0	1/1:4,32:36:81.03:741,81,0	1/1:5,20:25:71.90:634,72,0	1/1:3,8:10:26.94:233,27,0	1/1:2,5:7:17.96:156,18,0	1/1:4,17:21:57:513,57,0	1/1:1,19:21:56.06:499,56,0	1/1:0,9:9:27.01:247,27,0	1/1:1,19:20:51.01:467,51,0	1/1:3,16:17:45.02:412,45,0	1/1:1,8:9:24.01:220,24,0	1/1:3,19:21:57:516,57,0	1/1:1,27:28:81.04:741,81,0	1/1:4,14:18:44.94:401,45,0	1/1:0,11:11:27.01:247,27,0
chr10	14527193	.	C	CT	12312.62	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-2.363;DP=507;FS=14.327;HRun=9;HaplotypeScore=66.3039;InbreedingCoeff=0.8549;MQ=61.72;MQ0=0;MQRankSum=-3.889;QD=24.92;ReadPosRankSum=2.647;VQSLOD=4.4583;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,7:10:21.04:222,21,0	1/1:3,7:10:24.05:258,24,0	0/0:8,0:8:14.99:0,15,130	0/0:5,0:4:5.99:0,6,52	1/1:11,30:40:90.24:991,90,0	1/1:1,13:14:36.10:398,36,0	1/1:5,12:17:39.06:418,39,0	1/1:11,30:40:90.19:961,90,0	1/1:0,5:5:6.02:66,6,0	1/1:9,18:27:60.16:657,60,0	1/1:6,20:26:66.02:677,66,0	1/1:0,9:8:21.06:232,21,0	1/1:2,13:16:35.96:374,36,0	1/1:1,12:13:14.91:344,15,0	1/1:10,9:19:39.03:395,39,0	1/1:9,18:27:51.12:549,51,0	1/1:1,5:5:12.03:133,12,0	1/1:1,9:10:30.04:318,30,0	1/1:6,14:20:51.04:526,51,0	1/1:3,22:25:66.16:721,66,0	1/1:4,7:11:24.05:257,24,0	1/1:8,17:25:51.14:564,51,0	1/1:5,17:20:45.12:498,45,0	1/1:3,10:13:28.02:299,28,0	1/1:4,20:24:66.16:719,66,0	1/1:9,19:28:63.17:695,63,0	1/1:6,17:23:66.13:700,66,0	1/1:1,9:12:35.73:341,36,0
chr10	14527526	.	GTC	G	400.11	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-1.380;DP=660;FS=1.422;HRun=0;HaplotypeScore=127.0881;InbreedingCoeff=0.8775;MQ=56.22;MQ0=19;MQRankSum=-2.151;QD=11.11;ReadPosRankSum=-3.511;VQSLOD=2.8413;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:21.68:0,22,587	0/0:6,0:5:11.98:0,12,145	0/0:25,0:17:27.32:0,27,324	0/0:30,0:12:9.39:0,9,170	0/0:34,0:34:66.17:0,66,830	1/1:12,8:20:13.73:416,14,0	1/1:2,13:12:6.02:90,6,0	0/0:33,0:33:60.56:0,61,861	0/0:13,0:13:33.05:0,33,361	0/0:25,0:23:69.03:0,69,767	0/0:25,0:25:51.11:0,51,617	0/0:16,0:16:33.06:0,33,346	0/0:16,0:16:30.07:0,30,369	0/0:20,0:19:42.06:0,42,447	0/0:25,0:25:33.84:0,34,437	0/0:27,0:27:42.61:0,43,590	0/0:27,0:26:54.74:0,55,562	0/0:19,0:19:30.72:0,31,447	0/0:15,0:12:14.27:0,14,328	0/0:24,0:24:42.65:0,43,441	0/0:37,0:37:47.65:0,48,688	0/0:22,0:21:47.89:0,48,457	0/0:26,0:26:48.06:0,48,523	0/0:31,0:31:60.06:0,60,658	0/0:20,0:19:41.90:0,42,416	0/0:34,0:34:54.72:0,55,1016	0/0:20,0:20:42.48:0,42,452	0/0:24,0:22:51.01:0,51,506
chr10	14528231	.	TTAAA	T	344.22	PASS	AC=4;AF=0.074;AN=54;BaseQRankSum=3.677;DP=373;FS=1.387;HRun=0;HaplotypeScore=61.6535;InbreedingCoeff=0.7567;MQ=61.71;MQ0=0;MQRankSum=1.011;QD=20.25;ReadPosRankSum=0.983;VQSLOD=2.7920;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:39.13:0,39,958	0/0:8,0:8:21.07:0,21,523	0/0:11,0:10:12:0,12,231	0/0:10,0:8:17.79:0,18,225	0/0:21,0:21:48.16:0,48,1179	1/1:2,9:11:15.05:253,15,0	1/1:2,4:6:12.04:203,12,0	0/0:22,0:22:48.16:0,48,1077	0/0:9,0:9:18.06:0,18,409	0/0:15,0:15:30.08:0,30,694	0/0:18,0:18:39.12:0,39,902	0/0:15,0:15:33.10:0,33,770	0/0:8,0:8:15:0,15,292	0/0:12,0:12:30.06:0,30,644	0/0:18,0:18:39.13:0,39,959	0/0:15,0:15:33.11:0,33,797	0/0:27,0:28:63.22:0,63,1529	0/0:15,0:16:36.12:0,36,883	0/0:22,0:21:42.14:0,42,1003	0/0:10,0:10:18.06:0,18,448	0/0:1,0:1:3.01:0,3,63	./.	0/0:4,0:4:6:0,6,99	0/0:4,0:4:3.48:0,3,63	0/0:13,0:13:24.07:0,24,538	0/0:14,0:14:39.13:0,39,971	0/0:16,0:16:36.12:0,36,862	0/0:23,0:23:60.21:0,60,1463
chr10	14528280	.	C	CA	1619.29	PASS	AC=14;AF=0.259;AN=54;BaseQRankSum=-8.053;DP=380;FS=3.572;HRun=9;HaplotypeScore=40.7270;InbreedingCoeff=0.9386;MQ=68.52;MQ0=0;MQRankSum=1.367;QD=24.17;ReadPosRankSum=1.726;VQSLOD=4.3220;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,20:22:54.15:597,54,0	0/0:5,0:4:12:0,12,104	0/0:9,0:7:5.98:0,6,50	0/0:15,0:11:5.62:0,6,38	0/0:20,0:20:53.99:0,54,469	0/0:16,0:16:29.98:0,30,260	0/0:7,0:7:21:0,21,182	0/0:33,1:34:56.78:0,57,722	0/0:7,0:7:17.99:0,18,156	0/0:12,0:12:29.99:0,30,260	0/0:11,0:11:32.99:0,33,286	1/1:1,6:7:15.04:166,15,0	1/1:0,8:8:24.06:265,24,0	1/1:2,6:9:18.02:185,18,0	0/0:15,0:15:38.99:0,39,339	0/0:11,0:11:26.98:0,27,234	0/0:25,0:25:56.96:0,57,495	0/0:22,0:22:50.94:0,51,436	0/0:22,0:22:47.99:0,48,417	0/0:13,0:13:38.99:0,39,338	0/0:6,0:6:18:0,18,156	1/1:0,4:4:12.03:133,12,0	1/1:1,9:10:24.06:266,24,0	./.	1/1:0,7:7:18.05:199,18,0	0/0:17,0:17:47.99:0,48,417	0/0:24,0:24:38.08:0,38,519	0/0:21,0:21:59.99:0,60,521
chr10	14528613	.	C	CA	2775.10	PASS	AB=0.714;AC=29;AF=0.537;AN=54;BaseQRankSum=-7.748;DP=544;FS=0.439;HRun=14;HaplotypeScore=73.2211;InbreedingCoeff=0.5403;MQ=56.54;MQ0=18;MQRankSum=-2.676;QD=8.54;ReadPosRankSum=-2.293;VQSLOD=2.2978;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,1:48:28.61:0,29,155	1/1:3,7:8:18.88:160,19,0	./.	0/1:15,0:4:7.83:19,0,8	1/1:10,10:20:2.60:125,3,0	0/0:19,1:22:10.03:0,10,205	0/0:29,0:29:47.21:0,47,283	1/1:11,13:23:2.82:258,3,0	0/1:3,6:9:16.99:111,0,17	1/1:8,14:20:36:317,36,0	1/1:5,7:11:18.43:152,18,0	0/0:7,0:22:20.22:0,20,59	0/0:10,0:18:16.24:0,16,47	0/0:3,0:7:8.07:0,8,23	0/1:8,13:21:24.79:178,0,25	1/1:7,10:19:11:114,11,0	0/1:21,15:40:6.62:369,0,7	1/1:9,11:19:20.07:188,20,0	1/1:10,6:17:12.47:197,12,0	1/1:11,12:22:9.45:163,9,0	0/1:6,3:12:4.03:29,0,4	0/0:5,0:12:10.77:0,11,45	0/0:8,0:17:23.29:0,23,78	0/0:2,0:17:22.21:0,22,64	0/0:5,0:10:13.93:0,14,40	1/1:7,13:20:32.11:295,32,0	1/1:6,10:16:16.35:134,16,0	1/1:8,10:17:0.89:159,1,0
chr10	14530833	.	A	ACAGGCAA	7844.33	PASS	AB=1.000;AC=22;AF=0.393;AN=56;BaseQRankSum=-0.992;DP=656;FS=21.305;HRun=0;HaplotypeScore=158.9620;InbreedingCoeff=0.7914;MQ=89.10;MQ0=1;MQRankSum=-3.911;QD=22.80;ReadPosRankSum=-3.299;VQSLOD=2.3077;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:49,0:48:70.48:2192,70,0	0/0:6,0:6:6.02:0,6,137	0/1:51,0:47:99:124,0,366	0/1:43,0:37:99:247,0,250	0/0:16,0:16:24.07:0,24,502	1/1:18,0:18:24.08:753,24,0	1/1:34,0:33:12.03:181,12,0	0/0:40,0:40:32.22:0,32,663	0/0:11,0:11:18.06:0,18,410	0/0:24,0:24:45.13:0,45,936	0/0:8,0:8:15.05:0,15,333	1/1:31,0:31:15.01:327,15,0	1/1:18,0:18:45.15:1458,45,0	1/1:16,0:16:22.27:659,22,0	0/0:24,0:24:51.16:0,51,1087	0/0:30,0:30:45.15:0,45,1025	0/0:31,0:31:48.16:0,48,1062	0/0:18,0:18:27.09:0,27,615	0/0:19,0:19:22.30:0,22,424	0/0:11,0:11:9.03:0,9,204	0/0:31,0:31:48.15:0,48,1003	1/1:9,5:15:7.18:43,7,0	1/1:15,0:15:21.03:613,21,0	1/1:33,0:32:34.37:918,34,0	1/1:21,0:21:9.03:330,9,0	0/0:19,0:19:21.07:0,21,457	0/0:18,0:18:30.10:0,30,683	0/0:6,0:6:15.05:0,15,312
chr10	14530835	.	A	AGGCAACA	7148.52	PASS	AB=1.000;AC=22;AF=0.393;AN=56;BaseQRankSum=-1.703;DP=649;FS=18.993;HRun=0;HaplotypeScore=154.0975;InbreedingCoeff=0.7800;MQ=89.21;MQ0=1;MQRankSum=-4.021;QD=21.15;ReadPosRankSum=-3.043;VQSLOD=2.9282;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:48,0:47:67.47:2092,67,0	0/0:6,0:6:6.02:0,6,137	0/1:50,0:45:99:124,0,366	0/1:44,0:38:99:250,0,248	0/0:16,0:16:24.07:0,24,502	1/1:17,0:17:17.54:550,18,0	1/1:34,0:33:12.03:181,12,0	0/0:39,0:39:32.22:0,32,663	0/0:11,0:11:18.06:0,18,410	0/0:24,0:24:45.13:0,45,936	0/0:8,0:8:15.05:0,15,333	1/1:19,11:31:7.27:199,7,0	1/1:18,0:18:37.37:1242,37,0	1/1:17,0:17:20.55:642,21,0	0/0:26,0:26:51.16:0,51,1087	0/0:31,0:31:45.15:0,45,1025	0/0:31,0:31:48.16:0,48,1062	0/0:16,0:16:27.09:0,27,615	0/0:18,0:18:21.06:0,21,421	0/0:11,0:11:9.03:0,9,204	0/0:32,0:32:48.15:0,48,1003	1/1:14,0:14:7.18:43,7,0	1/1:14,0:14:21.50:614,22,0	1/1:30,0:29:29.12:881,29,0	1/1:21,0:21:9.03:330,9,0	0/0:18,0:18:21.07:0,21,457	0/0:18,0:18:30.10:0,30,683	0/0:6,0:6:15.05:0,15,312
chr10	14530836	.	G	GGCAACAG	7082.54	PASS	AB=0.980;AC=22;AF=0.393;AN=56;BaseQRankSum=-1.645;DP=653;FS=18.961;HRun=0;HaplotypeScore=155.8247;InbreedingCoeff=0.7800;MQ=88.57;MQ0=1;MQRankSum=-2.556;QD=20.65;ReadPosRankSum=-2.681;VQSLOD=2.3521;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:49,0:48:64.46:2026,64,0	0/0:6,0:6:6.02:0,6,137	0/1:49,0:44:99:124,0,366	0/1:45,0:41:99:250,0,248	0/0:15,0:15:24.07:0,24,502	1/1:17,0:17:17.54:550,18,0	1/1:22,11:32:12.03:181,12,0	0/0:39,0:39:32.22:0,32,663	0/0:11,0:11:18.06:0,18,410	0/0:25,0:25:45.13:0,45,936	0/0:8,0:8:15.05:0,15,333	1/1:31,0:31:7.27:199,7,0	1/1:18,0:18:37.37:1242,37,0	1/1:19,0:19:20.55:642,21,0	0/0:26,0:26:51.16:0,51,1087	0/0:31,0:31:45.15:0,45,1025	0/0:31,0:31:48.16:0,48,1062	0/0:16,0:16:27.09:0,27,615	0/0:18,0:18:21.06:0,21,421	0/0:11,0:11:9.03:0,9,204	0/0:32,0:32:48.15:0,48,1003	1/1:15,0:15:7.18:43,7,0	1/1:14,0:14:21.50:614,22,0	1/1:30,0:29:29.12:881,29,0	1/1:21,0:21:9.03:330,9,0	0/0:18,0:18:21.07:0,21,457	0/0:17,0:17:30.10:0,30,683	0/0:6,0:6:15.05:0,15,312
chr10	14530859	.	C	CA	2135.73	PASS	AB=0.776;AC=11;AF=0.196;AN=56;BaseQRankSum=12.928;DP=596;FS=3.671;HRun=1;HaplotypeScore=101.4108;InbreedingCoeff=-0.2513;MQ=76.11;MQ0=6;MQRankSum=-3.505;QD=7.60;ReadPosRankSum=1.104;VQSLOD=1.0569;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:20,23:42:99:690,0,259	0/0:2,0:2:6.02:0,6,78	0/0:39,3:34:38.34:0,38,954	0/1:43,6:34:66.01:66,0,689	0/0:14,0:14:30.08:0,30,375	0/1:12,8:20:99:166,0,171	0/1:30,1:29:85.40:85,0,239	0/0:32,0:30:78.18:0,78,986	0/0:15,0:15:21.05:0,21,273	0/0:26,0:26:71.91:0,72,853	0/0:9,0:9:21.07:0,21,273	0/1:24,0:24:99:102,0,205	0/1:11,12:23:99:406,0,178	0/1:7,9:16:95.19:160,0,95	0/0:25,0:25:63.20:0,63,806	0/0:26,0:26:66.21:0,66,857	0/0:24,0:24:60.19:0,60,773	0/0:13,0:13:36.12:0,36,462	0/0:15,0:15:42.12:0,42,531	0/0:7,0:7:18.04:0,18,217	0/0:30,0:29:69.22:0,69,891	0/1:12,0:12:29.61:30,0,65	0/1:6,8:14:86.82:210,0,87	0/1:17,11:27:37.54:293,0,38	0/1:10,11:21:76.25:76,0,171	0/0:14,0:14:36.12:0,36,467	0/0:15,0:15:41.83:0,42,544	0/0:6,0:6:18.06:0,18,234
chr10	14530861	.	C	CAG	313.85	PASS	AB=1.000;AC=18;AF=0.429;AN=42;BaseQRankSum=1.997;DP=617;FS=2.886;HRun=0;HaplotypeScore=128.3098;InbreedingCoeff=0.3260;MQ=72.81;MQ0=6;MQRankSum=-0.446;QD=1.07;ReadPosRankSum=-1.598;VQSLOD=1.9788;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:41,0:40:0.01:0,0,0	./.	./.	./.	./.	1/1:20,0:20:10.78:77,11,0	1/1:33,0:31:7.16:52,7,0	1/1:39,0:37:1.25:3,1,0	0/1:17,0:17:16.45:19,0,16	0/0:24,0:26:4.70:0,5,30	./.	0/1:24,0:24:0:0,0,0	1/1:24,0:24:8.99:79,9,0	0/0:17,0:17:2.73:0,3,14	1/1:24,5:32:2.97:44,3,0	0/1:26,0:26:15.95:16,0,39	0/0:22,0:25:0.73:0,1,20	./.	0/0:17,0:17:3.88:0,4,26	0/0:8,0:8:2.98:0,3,22	0/0:31,0:30:4.24:0,4,89	0/0:12,0:12:0:0,0,0	./.	1/1:27,0:26:14.99:141,15,0	0/0:16,0:16:0.60:0,1,2	0/0:14,0:14:3.12:0,3,23	0/0:17,0:17:8.87:0,9,79	1/1:10,0:9:1.72:4,2,0
chr10	14531461	.	AG	A	4458.69	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=11.594;DP=587;FS=0.346;HRun=6;HaplotypeScore=84.6132;InbreedingCoeff=0.9994;MQ=77.36;MQ0=0;MQRankSum=-6.245;QD=27.69;ReadPosRankSum=-0.126;VQSLOD=4.9780;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,23:30:78.06:786,78,0	0/0:14,0:14:42.11:0,42,518	0/0:12,2:14:22.26:0,22,390	0/0:20,0:20:50.31:0,50,640	0/0:16,0:16:42.13:0,42,535	0/0:21,0:21:60.10:0,60,734	0/0:21,0:21:63.18:0,63,794	0/0:30,0:30:75.21:0,75,929	0/0:23,0:23:66.19:0,66,835	0/0:31,0:32:87.26:0,87,1103	0/0:21,0:21:54.15:0,54,676	1/1:3,18:21:60.04:615,60,0	1/1:5,13:18:51.11:533,51,0	1/1:2,16:18:51.11:537,51,0	0/0:21,0:21:60.17:0,60,755	0/0:22,0:22:63.20:0,63,823	0/0:24,0:24:66.19:0,66,833	0/0:21,0:21:63.17:0,63,804	0/0:15,0:15:42.11:0,42,509	0/0:28,0:28:84.14:0,84,1042	0/0:19,0:19:57.12:0,57,708	1/1:2,22:24:68.85:652,69,0	1/1:1,13:14:39.10:418,39,0	1/1:4,13:17:47.91:454,48,0	1/1:3,16:19:45.05:463,45,0	0/0:28,0:28:81.26:0,81,1049	0/0:20,0:20:51.10:0,51,605	0/0:16,0:16:48.16:0,48,627
chr10	14531497	.	GA	G	4338.14	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=13.055;DP=518;FS=0.000;HRun=2;HaplotypeScore=70.0628;InbreedingCoeff=0.9995;MQ=75.85;MQ0=0;MQRankSum=-10.491;QD=33.12;ReadPosRankSum=0.269;VQSLOD=4.6906;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,19:21:45.03:544,45,0	0/0:12,0:12:33.11:0,33,487	0/0:21,0:22:53.69:0,54,872	0/0:21,0:20:57.19:0,57,841	0/0:14,0:14:42.13:0,42,609	0/0:19,0:19:48.14:0,48,680	0/0:19,0:19:54.14:0,54,765	0/0:25,0:25:72.22:0,72,1012	0/0:22,0:22:63.17:0,63,900	0/0:20,0:21:63.10:0,63,868	0/0:14,0:14:42.14:0,42,629	1/1:2,20:22:63.16:795,63,0	1/1:2,14:16:45.08:562,45,0	1/1:0,12:12:36.12:466,36,0	0/0:25,0:25:75.25:0,75,1116	0/0:22,0:22:66.20:0,66,950	0/0:21,0:21:51.15:0,51,742	0/0:18,0:18:54.18:0,54,808	0/0:21,0:21:60.02:0,60,831	0/0:23,0:23:66.21:0,66,969	0/0:21,0:21:60.18:0,60,874	1/1:0,21:21:60.02:732,60,0	1/1:1,8:9:27.08:336,27,0	1/1:3,13:16:35.90:465,36,0	1/1:3,11:14:36.09:439,36,0	0/0:25,0:25:75.24:0,75,1069	0/0:13,0:13:39.13:0,39,584	0/0:9,0:9:27.06:0,27,362
chr10	14531550	.	TC	T	1940.12	PASS	AB=0.902;AC=36;AF=0.667;AN=54;BaseQRankSum=-5.703;DP=408;FS=40.778;HRun=12;HaplotypeScore=58.0020;InbreedingCoeff=0.7112;MQ=73.27;MQ0=1;MQRankSum=-0.711;QD=6.38;ReadPosRankSum=3.167;VQSLOD=-0.5133;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:18:7.20:0,7,43	1/1:7,4:11:11.59:90,12,0	0/1:17,2:14:2.77:3,0,110	0/1:8,1:9:8.65:9,0,97	1/1:7,5:12:11.91:92,12,0	1/1:6,10:17:19.95:145,20,0	1/1:9,6:16:13.71:98,14,0	1/1:19,8:28:22.88:168,23,0	1/1:10,11:21:26.79:207,27,0	1/1:8,7:16:16.46:120,16,0	1/1:4,2:6:4.38:44,4,0	0/0:15,0:17:30.85:0,31,228	0/0:14,0:16:22.92:0,23,147	0/0:7,0:9:13.72:0,14,97	1/1:12,8:21:22.03:166,22,0	1/1:8,3:11:8.88:67,9,0	1/1:13,20:33:44.72:347,45,0	1/1:10,6:17:10.92:74,11,0	1/1:9,0:9:5.01:29,5,0	1/1:9,1:11:12.96:77,13,0	1/1:8,11:20:25.88:191,26,0	0/0:13,0:13:4.05:0,4,52	0/0:7,0:7:2.87:0,3,20	0/0:15,0:16:18.26:0,18,133	0/0:7,0:7:11.98:0,12,100	1/1:8,5:13:8.93:69,9,0	1/1:8,6:14:17.82:135,18,0	./.
chr10	14534291	.	AT	A	1957.71	PASS	AB=0.588;AC=15;AF=0.268;AN=56;BaseQRankSum=5.984;DP=568;FS=5.881;HRun=12;HaplotypeScore=60.6461;InbreedingCoeff=0.8520;MQ=71.18;MQ0=0;MQRankSum=-0.346;QD=12.31;ReadPosRankSum=2.727;VQSLOD=3.6115;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,31:38:71.51:557,72,0	0/0:7,0:7:17.92:0,18,162	0/0:14,0:12:16.46:0,16,107	0/0:13,0:11:7.46:0,7,74	0/0:19,1:20:32.05:0,32,480	0/0:9,0:9:18.02:0,18,173	0/0:24,1:25:33.33:0,33,483	0/0:36,1:37:61.38:0,61,789	0/0:19,0:20:44.89:0,45,430	0/0:13,0:15:39.18:0,39,339	0/0:16,0:17:44.28:0,44,412	1/1:6,18:26:54.83:403,55,0	1/1:6,7:13:10.12:129,10,0	0/1:3,7:10:15.52:78,0,16	0/0:27,0:27:37.18:0,37,544	0/0:18,0:21:35.91:0,36,349	0/0:35,2:36:43.64:0,44,778	0/0:24,1:25:39.85:0,40,570	0/0:29,0:29:63.36:0,63,641	0/0:15,1:17:16.53:0,17,312	0/0:34,0:34:72.93:0,73,692	1/1:7,5:13:14.82:99,15,0	1/1:2,20:22:44.56:348,45,0	1/1:5,15:21:40.87:308,41,0	1/1:3,13:16:29.86:232,30,0	0/0:21,0:23:53.91:0,54,522	0/0:15,0:15:36.04:0,36,352	0/0:3,0:3:3.01:0,3,30
chr10	14534933	.	C	CAA	3044.99	PASS	AB=0.841;AC=47;AF=0.940;AN=50;BaseQRankSum=-0.533;DP=318;FS=1.703;HRun=13;HaplotypeScore=113.0491;InbreedingCoeff=0.0236;MQ=55.12;MQ0=10;MQRankSum=0.620;QD=9.64;ReadPosRankSum=0.447;VQSLOD=2.3787;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,17:23:21.90:266,22,0	./.	0/1:14,0:6:3.96:4,0,31	0/1:10,0:7:13.27:13,0,14	1/1:12,0:11:6.03:67,6,0	1/1:18,0:18:3.88:46,4,0	1/1:11,0:11:11.76:102,12,0	1/1:22,0:14:13.11:84,13,0	./.	1/1:11,0:9:9.02:91,9,0	1/1:17,0:16:27.05:281,27,0	1/1:8,1:9:20.98:229,21,0	1/1:6,0:6:12.11:131,12,0	1/1:2,6:8:6.02:81,6,0	1/1:5,0:5:9.47:83,9,0	1/1:10,0:9:17.80:173,18,0	1/1:5,0:4:6.01:58,6,0	1/1:9,0:7:14.99:134,15,0	1/1:8,0:7:12.43:104,12,0	1/1:10,0:8:3:30,3,0	./.	1/1:11,7:17:13.70:138,14,0	0/1:7,6:13:13.13:74,0,13	1/1:3,4:8:6.01:69,6,0	1/1:5,10:14:18.01:223,18,0	1/1:12,0:11:18.01:169,18,0	1/1:18,0:16:26.23:228,26,0	1/1:19,0:19:33.78:273,34,0
chr10	14535946	.	TA	T	5151.59	PASS	AB=0.972;AC=36;AF=0.643;AN=56;BaseQRankSum=5.675;DP=428;FS=9.790;HRun=11;HaplotypeScore=49.8992;InbreedingCoeff=0.6790;MQ=74.53;MQ0=1;MQRankSum=-0.392;QD=15.66;ReadPosRankSum=-0.977;VQSLOD=4.4477;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:78.17:0,78,821	0/1:3,0:3:0:0,0,0	0/1:18,0:12:3.84:4,0,26	0/1:14,0:8:0.77:1,0,27	1/1:2,19:22:55.95:449,56,0	0/1:12,3:15:34.84:35,0,281	0/1:5,0:5:8.62:9,0,55	1/1:3,22:25:65.92:542,66,0	1/1:3,7:10:20.96:172,21,0	1/1:4,21:25:62.88:510,63,0	1/1:2,15:17:44.94:369,45,0	0/0:11,0:11:30.07:0,30,319	0/0:12,0:12:30.07:0,30,312	0/0:12,0:12:24.06:0,24,256	1/1:6,7:13:20.97:172,21,0	1/1:0,12:12:32.96:271,33,0	1/1:4,16:21:43.98:351,44,0	1/1:1,12:13:35.96:295,36,0	1/1:3,13:16:38.08:318,38,0	1/1:3,9:12:26.97:222,27,0	1/1:4,7:11:14.97:123,15,0	0/1:10,0:10:3.49:3,0,158	0/0:12,0:12:27.07:0,27,285	0/0:8,0:8:18.05:0,18,192	0/0:12,0:12:25.62:0,26,260	1/1:2,22:24:65.92:542,66,0	1/1:1,17:18:44.42:368,44,0	1/1:8,16:24:47.91:394,48,0
chr10	14536249	.	C	CT	514.09	PASS	AB=1.000;AC=14;AF=0.259;AN=54;BaseQRankSum=-2.578;DP=429;FS=3.335;HRun=14;HaplotypeScore=66.3563;InbreedingCoeff=0.6533;MQ=52.63;MQ0=11;MQRankSum=-2.455;QD=4.90;ReadPosRankSum=0.071;VQSLOD=2.0111;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,20:32:23.82:181,24,0	0/1:6,0:6:10.61:11,0,63	0/0:5,0:2:2.95:0,3,19	0/0:8,0:3:2.74:0,3,12	0/0:27,0:27:39.64:0,40,312	0/0:16,0:17:6.11:0,6,102	0/0:14,0:13:26.50:0,26,171	0/0:35,0:29:53.21:0,53,311	0/0:10,0:10:17.69:0,18,115	0/0:19,0:17:26.87:0,27,173	0/0:17,0:17:28.53:0,29,174	1/1:5,2:6:5.96:45,6,0	1/1:2,6:8:12:105,12,0	1/1:6,13:18:23.80:192,24,0	0/0:11,0:11:14.70:0,15,96	0/0:15,0:17:39.61:0,40,242	0/0:29,0:27:18.19:0,18,234	0/0:15,0:15:16.75:0,17,171	0/0:25,0:20:43.15:0,43,263	0/0:5,0:5:2.53:0,3,10	0/0:10,0:9:2.78:0,3,19	0/1:5,0:5:0:0,0,0	./.	1/1:7,4:10:3:27,3,0	1/1:6,9:15:14.91:117,15,0	0/0:16,0:17:4.02:0,4,153	0/0:24,0:23:23.64:0,24,292	0/0:11,0:10:17.29:0,17,106
chr10	14536263	.	T	TA	2238.39	PASS	AB=1.000;AC=35;AF=0.625;AN=56;BaseQRankSum=3.155;DP=431;FS=4.383;HRun=3;HaplotypeScore=51.1066;InbreedingCoeff=0.6097;MQ=49.24;MQ0=26;MQRankSum=1.982;QD=6.45;ReadPosRankSum=1.353;VQSLOD=0.6248;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:31,0:26:6.07:6,0,37	1/1:6,0:6:11.20:49,11,0	0/0:18,0:2:2.98:0,3,21	0/1:12,0:3:0.02:0,0,0	1/1:33,0:32:37.29:236,37,0	0/0:15,0:15:23.94:0,24,248	0/0:12,0:10:24.07:0,24,279	1/1:35,0:30:50.88:262,51,0	1/1:11,0:11:22.41:104,22,0	1/1:16,1:17:39.02:226,39,0	1/1:16,0:16:28.30:133,28,0	0/0:8,0:7:7.48:0,7,75	0/1:8,0:8:4.95:5,0,47	0/1:17,0:16:0.64:1,0,49	1/1:9,0:9:16.84:92,17,0	1/1:18,0:18:28.42:133,28,0	1/1:21,2:21:25.06:154,25,0	1/1:13,1:14:19.90:99,20,0	1/1:23,0:21:45.94:235,46,0	1/1:12,0:12:18.62:147,19,0	1/1:10,0:7:5.25:45,5,0	0/0:5,0:4:2.98:0,3,21	0/0:6,0:5:2.97:0,3,20	0/0:9,0:8:7.45:0,7,52	0/0:11,0:11:5.43:0,5,48	1/1:19,2:20:45.36:272,45,0	1/1:20,2:21:35.69:195,36,0	0/1:8,0:7:4.34:28,0,4
chr10	14537363	.	T	TA	3001.49	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=-2.333;DP=588;FS=2.246;HRun=6;HaplotypeScore=75.4139;InbreedingCoeff=0.9051;MQ=68.61;MQ0=86;MQRankSum=-1.982;QD=9.78;ReadPosRankSum=-4.015;VQSLOD=0.5831;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:40:92.76:0,93,860	1/1:0,7:5:3.01:36,3,0	0/0:31,0:18:40.60:0,41,394	0/0:32,0:25:60.10:0,60,597	1/1:2,16:9:20.49:203,20,0	0/0:16,0:16:3.58:0,4,140	0/0:30,0:29:48.41:0,48,442	1/1:12,13:20:20.08:304,20,0	1/1:16,10:18:45.04:515,45,0	1/1:9,10:13:24.05:275,24,0	1/1:3,9:10:8.51:85,9,0	0/0:26,0:25:59.28:0,59,539	0/0:17,0:13:26.87:0,27,260	0/0:12,0:11:26.97:0,27,260	1/1:7,21:20:32.59:383,33,0	1/1:9,13:20:12.50:137,12,0	1/1:23,10:21:35.53:392,36,0	1/1:6,7:8:14.63:159,15,0	1/1:13,0:11:19.54:103,20,0	1/1:10,0:9:8.33:52,8,0	1/1:31,0:23:19.64:125,20,0	0/0:23,0:22:56.94:0,57,550	0/0:17,0:17:29.94:0,30,282	0/0:23,0:23:56.87:0,57,537	0/0:12,0:10:15.02:0,15,152	1/1:13,3:12:20.55:225,21,0	1/1:13,13:17:13.39:151,13,0	1/1:1,6:6:6.02:75,6,0
chr10	14537368	.	AACAC	A	687.18	PASS	AB=1.000;AC=16;AF=0.308;AN=52;BaseQRankSum=-0.819;DP=665;FS=4.389;HRun=0;HaplotypeScore=105.3218;InbreedingCoeff=0.6934;MQ=64.41;MQ0=98;MQRankSum=0.833;QD=2.84;ReadPosRankSum=2.698;VQSLOD=1.8649;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:37,11:46:12.03:168,12,0	0/0:10,0:8:9.01:0,9,156	./.	./.	0/0:20,0:11:18.05:0,18,318	0/0:18,0:18:18.04:0,18,301	0/0:33,0:31:14.86:0,15,302	0/0:25,0:19:15.67:0,16,106	0/0:28,0:21:39:0,39,673	0/0:22,0:15:32.97:0,33,605	0/0:11,0:9:12.03:0,12,209	1/1:17,11:28:15.04:214,15,0	1/1:15,6:17:3.01:47,3,0	1/1:12,7:18:5.93:63,6,0	0/0:33,0:25:32.99:0,33,920	0/0:20,0:19:29.95:0,30,520	0/1:37,0:24:0.62:1,0,583	0/1:16,0:9:3.16:3,0,180	0/0:7,0:12:6.02:0,6,104	0/0:6,0:18:15.05:0,15,249	0/0:9,0:29:24.08:0,24,368	1/1:18,4:21:9.03:132,9,0	1/1:13,10:23:5.83:85,6,0	1/1:17,8:24:9.03:140,9,0	0/0:9,0:7:2.99:0,3,24	0/0:22,0:18:39.04:0,39,673	0/0:28,0:18:27.53:0,28,412	0/0:7,0:6:6.02:0,6,114
chr10	14537814	.	GA	G	1556.57	PASS	AB=0.974;AC=24;AF=0.429;AN=56;BaseQRankSum=-8.593;DP=527;FS=4.901;HRun=12;HaplotypeScore=95.1387;InbreedingCoeff=0.4433;MQ=54.91;MQ0=23;MQRankSum=0.525;QD=5.07;ReadPosRankSum=1.265;VQSLOD=2.3664;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:16,18:31:20.14:327,20,0	0/0:7,0:7:15.23:0,15,97	0/1:24,0:10:0.56:1,0,106	0/1:29,0:8:19.55:20,0,38	0/1:11,1:12:6:6,0,85	0/1:21,0:20:6.06:6,0,11	0/1:16,0:15:0.99:1,0,23	0/1:26,2:27:40.69:41,0,183	0/0:18,1:16:1.93:0,2,99	0/1:28,2:26:5.47:5,0,183	0/0:24,0:23:42.52:0,43,291	1/1:5,6:11:11.94:92,12,0	1/1:2,6:8:8.88:107,9,0	1/1:5,5:10:24.03:172,24,0	0/0:10,0:10:17.72:0,18,111	0/0:13,1:14:9.07:0,9,172	0/0:31,2:28:1.73:0,2,329	0/0:17,0:16:36.40:0,36,259	0/0:17,0:16:10.57:0,11,166	0/0:29,1:30:37.75:0,38,374	0/1:10,0:10:3.62:4,0,86	1/1:4,8:12:23.88:185,24,0	1/1:5,15:19:41.51:325,42,0	1/1:5,10:15:22.71:167,23,0	1/1:12,15:27:37.69:285,38,0	0/0:22,0:22:29.88:0,30,240	0/0:20,1:17:10.47:0,10,138	0/0:6,0:5:7.27:0,7,70
chr10	14537825	.	AAG	A	471.28	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-1.697;DP=537;FS=3.326;HRun=0;HaplotypeScore=110.0549;InbreedingCoeff=0.9280;MQ=61.34;MQ0=15;MQRankSum=-3.669;QD=12.74;ReadPosRankSum=-2.945;VQSLOD=3.0210;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:26:20.15:0,20,224	0/0:7,0:7:17.99:0,18,233	0/0:29,0:13:22.74:0,23,280	0/0:30,0:11:16.80:0,17,146	0/0:15,0:15:32.17:0,32,350	1/1:9,12:20:47.25:463,47,0	1/1:14,2:16:15.48:127,15,0	0/0:31,0:30:74.23:0,74,821	0/0:18,0:18:30.05:0,30,334	0/0:28,0:25:56.38:0,56,714	0/0:24,0:23:59.71:0,60,746	0/0:10,0:10:13.06:0,13,103	0/0:11,0:11:26.98:0,27,157	0/0:12,0:12:24.37:0,24,137	0/0:13,0:13:33.02:0,33,373	0/0:13,0:13:35.01:0,35,397	0/0:37,0:32:92.41:0,92,1073	0/0:18,0:18:41.35:0,41,487	0/0:19,0:19:52.18:0,52,636	0/0:27,0:27:71.86:0,72,950	0/0:11,0:11:26.45:0,26,313	0/0:12,0:12:21.02:0,21,166	0/0:18,0:18:38.56:0,39,219	0/0:16,0:16:9.68:0,10,115	0/0:22,0:22:20.04:0,20,166	0/0:23,0:23:47.22:0,47,749	0/0:22,0:19:41.96:0,42,497	0/0:5,0:5:15.05:0,15,209
chr10	14542304	.	A	AATACATAC	7532.24	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-3.950;DP=571;FS=1.649;HRun=0;HaplotypeScore=137.0656;InbreedingCoeff=0.9726;MQ=60.45;MQ0=0;MQRankSum=-11.340;QD=44.31;ReadPosRankSum=-0.642;VQSLOD=4.3338;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,13:21:15.05:616,15,0	0/0:16,0:16:39.13:0,39,913	0/0:14,0:13:23.62:0,24,324	0/0:8,0:6:8.86:0,9,176	0/0:20,0:20:51.16:0,51,1169	0/0:11,0:11:27.09:0,27,592	0/0:18,0:18:39.13:0,39,900	0/0:32,0:32:39.10:0,39,814	0/0:17,0:17:33.10:0,33,780	0/0:27,0:27:66.21:0,66,1439	0/0:21,0:21:42.13:0,42,964	1/1:13,21:36:33.58:1308,34,0	1/1:7,13:23:27.09:1113,27,0	1/1:9,15:25:33.11:1342,33,0	0/0:22,0:22:54.16:0,54,1174	0/0:18,0:18:36.12:0,36,809	0/0:31,0:31:78.21:0,78,1771	0/0:23,0:23:57.18:0,57,1303	0/0:14,0:13:18.02:0,18,392	0/0:22,0:22:51.17:0,51,1147	0/0:18,0:18:33.10:0,33,682	1/1:5,8:14:15.41:460,15,0	1/1:3,16:19:36.12:1290,36,0	1/1:4,3:9:9.03:191,9,0	1/1:8,13:23:30.10:1213,30,0	0/0:26,0:26:60.16:0,60,1149	0/0:15,0:15:36.12:0,36,850	0/0:27,0:27:72.25:0,72,1770
chr10	14542360	.	A	AGT	1738.07	PASS	AB=0.919;AC=38;AF=0.760;AN=50;BaseQRankSum=-2.404;DP=625;FS=9.824;HRun=0;HaplotypeScore=110.0640;InbreedingCoeff=0.1171;MQ=65.44;MQ0=14;MQRankSum=1.258;QD=3.64;ReadPosRankSum=0.089;VQSLOD=2.0101;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:23:3.01:44,3,0	1/1:14,0:14:9:93,9,0	./.	./.	1/1:15,3:18:2.71:44,3,0	1/1:25,0:24:13.95:120,14,0	1/1:17,0:17:5.99:48,6,0	1/1:27,0:26:1.25:3,1,0	1/1:14,0:14:5.98:47,6,0	./.	0/1:15,1:18:29.33:29,0,93	1/1:29,0:29:6:68,6,0	0/1:16,0:16:0:0,0,0	1/1:14,0:13:3.01:44,3,0	1/1:18,3:22:6.02:88,6,0	0/1:22,2:24:43.24:130,0,43	0/1:25,6:31:79.13:152,0,79	1/1:20,8:29:11.83:296,12,0	1/1:19,0:18:0.47:1,0,0	0/0:22,0:23:7.24:0,7,76	0/0:35,0:34:3:0,3,32	1/1:13,2:15:6:69,6,0	0/0:12,0:12:3:0,3,32	0/1:19,2:21:14.05:160,0,14	1/1:19,0:19:12.01:128,12,0	1/1:25,2:27:6.02:88,6,0	1/1:16,6:22:6.47:88,6,0	0/1:33,0:33:14.10:131,0,14
chr10	14544495	.	CGT	C	944.62	PASS	AB=0.865;AC=28;AF=0.519;AN=54;BaseQRankSum=7.720;DP=680;FS=0.761;HRun=0;HaplotypeScore=144.7459;InbreedingCoeff=0.2448;MQ=67.20;MQ0=29;MQRankSum=-5.960;QD=2.16;ReadPosRankSum=-0.880;VQSLOD=2.5467;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:17,14:26:0.16:97,0,0	1/1:3,2:6:8.86:77,9,0	./.	0/0:42,0:23:0:0,0,0	0/0:15,5:23:2.50:0,2,9	0/0:19,0:19:10.70:0,11,47	0/0:18,1:18:10.36:0,10,84	0/1:45,0:45:0:0,0,0	1/1:9,3:17:11.86:108,12,0	0/1:26,2:28:14.83:77,0,15	1/1:8,2:12:5.88:47,6,0	0/0:30,0:29:32.91:0,33,395	0/1:22,0:21:0.11:0,0,279	0/1:20,2:21:2.53:3,0,356	0/1:16,7:27:13.12:24,0,13	1/1:17,3:26:29.98:239,30,0	0/1:18,4:20:15.42:45,0,15	1/1:10,1:10:5.59:26,6,0	1/1:16,3:19:8.65:60,9,0	1/1:13,0:15:2.90:16,3,0	0/0:32,0:29:2.37:0,2,8	0/0:19,0:18:21.06:0,21,280	0/0:15,0:15:5.85:0,6,190	0/1:34,2:35:7.93:8,0,590	0/1:20,1:20:6.51:7,0,219	1/1:20,1:23:11.81:92,12,0	0/1:12,0:14:13.25:78,0,13	1/1:9,2:14:7.46:101,7,0
chr10	14544564	.	CTG	C	8307.09	PASS	AB=0.647;AC=35;AF=0.625;AN=56;BaseQRankSum=7.421;DP=670;FS=11.235;HRun=0;HaplotypeScore=142.9467;InbreedingCoeff=0.9008;MQ=50.42;MQ0=42;MQRankSum=2.015;QD=19.83;ReadPosRankSum=4.043;VQSLOD=4.8166;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:38:87.22:0,87,1388	1/1:2,15:17:26.15:378,26,0	0/0:16,0:10:29.11:0,29,365	0/0:26,0:20:50.32:0,50,677	1/1:5,16:19:21.07:300,21,0	0/1:5,6:10:5.25:145,0,5	1/1:10,17:22:24.02:311,24,0	1/1:8,26:22:56.94:656,57,0	1/1:8,22:28:54.04:772,54,0	1/1:3,11:12:24.49:360,24,0	1/1:1,11:10:18.06:257,18,0	0/0:28,0:28:78.25:0,78,1319	0/0:22,0:22:59.45:0,59,965	0/0:20,0:17:48.14:0,48,790	1/1:11,27:34:44.85:644,45,0	1/1:4,27:29:34.62:703,35,0	1/1:4,33:31:49.01:918,49,0	1/1:6,14:14:29.84:412,30,0	1/1:3,7:10:9.56:251,10,0	1/1:7,11:15:15.05:214,15,0	1/1:7,32:29:35.89:515,36,0	0/0:12,0:9:18.05:0,18,280	0/0:18,0:16:25.14:0,25,471	0/0:47,0:44:99:0,120,1888	0/0:22,0:22:51.17:0,51,847	1/1:3,31:29:59.41:962,59,0	1/1:4,12:13:2.79:277,3,0	1/1:3,7:10:20.24:232,20,0
chr10	14544971	.	G	GAA	6202.48	PASS	AB=0.672;AC=46;AF=0.885;AN=52;BaseQRankSum=-3.847;DP=523;FS=0.000;HRun=12;HaplotypeScore=79.1479;InbreedingCoeff=0.4361;MQ=45.61;MQ0=19;MQRankSum=2.543;QD=13.06;ReadPosRankSum=-1.428;VQSLOD=3.1819;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:34,0:29:56.92:477,57,0	1/1:4,7:11:9.03:118,9,0	./.	./.	1/1:13,2:17:24.71:215,25,0	0/0:17,0:17:19.17:0,19,82	0/0:19,0:19:1.72:0,2,13	1/1:25,2:28:53.73:492,54,0	1/1:4,11:15:8.83:102,9,0	1/1:7,19:29:54.08:515,54,0	1/1:11,7:16:33.48:393,33,0	1/1:17,0:16:8.99:76,9,0	1/1:17,0:17:29.95:247,30,0	1/1:15,0:13:20.46:175,20,0	0/1:11,10:22:7.25:173,0,7	1/1:3,13:15:17.55:215,18,0	1/1:6,16:23:23.69:382,24,0	1/1:6,11:14:18.06:252,18,0	1/1:7,0:17:14.37:136,14,0	1/1:6,17:25:32.07:374,32,0	1/1:4,6:9:6.39:53,6,0	1/1:22,0:22:23.39:221,23,0	1/1:21,0:19:4.92:178,5,0	1/1:15,0:14:17.97:148,18,0	1/1:24,0:21:16.41:232,16,0	1/1:4,10:15:31.85:343,32,0	1/1:20,5:26:53.02:534,53,0	0/1:6,5:9:12.72:151,0,13
chr10	14544978	.	AAAAAAG	A	467.51	PASS	AB=1.000;AC=6;AF=0.111;AN=54;BaseQRankSum=-1.518;DP=546;FS=3.654;HRun=0;HaplotypeScore=119.9150;InbreedingCoeff=0.6423;MQ=50.47;MQ0=20;MQRankSum=-3.054;QD=5.99;ReadPosRankSum=1.273;VQSLOD=2.1555;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:29:46.87:0,47,1298	0/0:11,0:11:16.28:0,16,250	./.	0/1:19,0:6:1.90:2,0,18	0/0:19,0:18:26.07:0,26,518	1/1:2,15:17:21.05:430,21,0	1/1:3,15:18:9.03:148,9,0	0/0:34,0:33:69.30:0,69,898	0/0:17,0:16:12.01:0,12,191	0/0:32,0:32:65.90:0,66,1293	0/0:20,0:17:34.20:0,34,523	0/0:20,0:19:9.03:0,9,219	0/0:17,0:17:30.10:0,30,720	0/0:14,0:12:21.07:0,21,529	0/0:19,0:18:21.27:0,21,384	0/0:19,0:17:25.88:0,26,427	0/1:24,0:23:2.98:3,0,700	0/0:14,0:11:18.06:0,18,447	0/0:20,0:19:48.87:0,49,745	0/0:26,0:26:36.11:0,36,774	0/0:11,0:9:9.64:0,10,121	0/0:24,0:23:29.28:0,29,754	0/0:19,0:18:33.02:0,33,669	0/0:14,0:13:18.06:0,18,445	0/0:23,0:20:16.01:0,16,746	0/0:17,0:17:50.14:0,50,855	0/0:28,0:27:60.62:0,61,1291	0/0:11,0:9:14.86:0,15,366
chr10	14544981	.	AAAG	A	836.09	PASS	AB=0.970;AC=18;AF=0.333;AN=54;BaseQRankSum=-2.446;DP=560;FS=1.682;HRun=0;HaplotypeScore=95.9206;InbreedingCoeff=-0.1254;MQ=52.27;MQ0=18;MQRankSum=-9.661;QD=2.68;ReadPosRankSum=-3.049;VQSLOD=1.4435;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:31:30.25:0,30,685	0/1:12,0:12:17.37:17,0,138	./.	0/0:23,0:8:10.55:0,11,51	0/1:19,2:19:7.64:8,0,216	1/1:16,0:16:21:185,21,0	1/1:17,0:17:9:78,9,0	0/1:28,5:32:99:208,0,314	0/1:16,0:15:25.79:26,0,82	0/0:30,0:30:16.62:0,17,592	0/1:17,2:17:99:153,0,189	0/0:20,0:19:9.01:0,9,119	0/0:18,0:18:30.06:0,30,375	0/0:17,0:15:25.42:0,25,302	0/1:19,0:18:61.91:62,0,199	0/1:19,0:17:58.23:58,0,147	0/1:24,0:23:66.64:67,0,275	0/1:15,0:12:0.14:0,0,195	0/1:19,1:19:54.77:55,0,369	0/1:27,0:27:4.66:5,0,334	0/1:11,0:9:1.37:1,0,54	0/0:27,0:26:43.77:0,44,473	0/0:21,0:20:40.27:0,40,436	0/0:12,0:11:18.04:0,18,230	0/0:21,0:20:32.96:0,33,411	0/0:17,0:17:26.81:0,27,382	0/1:29,2:30:50.77:51,0,625	0/1:12,0:10:21.38:21,0,182
chr10	14544982	.	AAG	A	417.19	PASS	AB=0.989;AC=15;AF=0.278;AN=54;BaseQRankSum=-0.204;DP=561;FS=0.559;HRun=0;HaplotypeScore=91.4653;InbreedingCoeff=-0.0290;MQ=53.80;MQ0=18;MQRankSum=-10.999;QD=1.48;ReadPosRankSum=-2.992;VQSLOD=1.2712;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:28:58.84:0,59,540	0/0:13,0:13:4.59:0,5,149	./.	0/0:24,0:9:6.20:0,6,43	0/1:22,1:21:30.64:31,0,245	1/1:16,0:16:20.81:144,21,0	1/1:17,0:17:8.99:83,9,0	0/1:33,0:32:99:111,0,307	0/1:17,0:16:5.62:6,0,83	0/1:28,1:29:6.87:7,0,486	0/1:18,0:16:59.55:60,0,130	0/0:18,0:17:9.01:0,9,85	0/0:18,0:18:29.91:0,30,268	0/0:17,0:15:24.49:0,24,221	0/1:21,0:20:14.50:14,0,198	0/1:18,1:17:2.42:2,0,115	0/1:23,0:22:54.03:54,0,203	0/0:15,0:12:17.01:0,17,154	0/1:20,0:19:22.81:23,0,280	0/0:28,1:29:23.48:0,23,310	0/0:11,0:9:2.79:0,3,46	0/0:26,0:25:31.18:0,31,352	0/0:22,0:21:43.80:0,44,375	0/0:11,0:10:17.98:0,18,161	0/0:20,0:19:32.92:0,33,300	0/0:16,1:17:13.03:0,13,365	0/1:33,0:32:31.75:32,0,516	0/1:12,0:10:4.49:4,0,134
chr10	14548209	.	CCTT	C	14962.75	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=10.227;DP=679;FS=0.000;HRun=0;HaplotypeScore=121.6860;InbreedingCoeff=0.9993;MQ=84.99;MQ0=0;MQRankSum=-8.500;QD=40.99;ReadPosRankSum=2.433;VQSLOD=5.8608;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,105,2328	1/1:2,8:10:21.54:344,22,0	0/0:31,0:31:75.23:0,75,1436	0/0:27,0:27:66.21:0,66,1299	1/1:2,15:17:39.13:636,39,0	0/0:25,0:25:69.24:0,69,1536	0/0:20,0:20:57.20:0,57,1255	1/1:5,35:40:99:1606,99,0	1/1:3,28:31:81.28:1322,81,0	1/1:4,30:34:90.29:1440,90,0	1/1:0,17:17:42.14:684,42,0	0/0:33,0:33:96.32:0,96,2093	0/0:25,0:25:75.21:0,75,1627	0/0:25,0:25:72.25:0,72,1608	1/1:0,29:29:81.28:1321,81,0	1/1:1,21:22:57.19:930,57,0	1/1:3,13:16:36.12:584,36,0	1/1:2,19:21:48.16:783,48,0	1/1:2,12:14:33.10:514,33,0	1/1:1,14:15:39.13:636,39,0	1/1:3,33:36:84.29:1371,84,0	0/0:17,0:17:50.84:0,51,1076	0/0:20,0:20:51.16:0,51,1083	0/0:29,0:29:87.26:0,87,1853	0/0:26,0:26:75.26:0,75,1665	1/1:0,25:25:72.19:1078,72,0	1/1:1,26:27:75.26:1223,75,0	1/1:0,11:11:30.10:490,30,0
chr10	14548316	.	AG	A	11819.68	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=14.763;DP=641;FS=1.676;HRun=4;HaplotypeScore=93.0260;InbreedingCoeff=0.9966;MQ=78.55;MQ0=0;MQRankSum=-4.267;QD=33.39;ReadPosRankSum=2.163;VQSLOD=5.2374;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,159,2175	1/1:2,15:17:39.12:468,39,0	0/0:20,0:20:51.03:0,51,675	0/0:16,0:16:36.11:0,36,476	1/1:0,12:12:33.10:396,33,0	0/0:18,0:18:51.17:0,51,714	0/0:30,0:30:84.28:0,84,1175	1/1:0,24:24:72.22:862,72,0	1/1:1,26:27:78.24:936,78,0	1/1:0,15:15:45.14:539,45,0	1/1:0,5:5:15.05:180,15,0	0/0:21,0:21:54.18:0,54,756	0/0:18,0:18:51.17:0,51,708	0/0:26,0:26:75.24:0,75,1020	1/1:0,35:35:99:1188,99,0	1/1:0,28:28:81.25:972,81,0	1/1:2,25:27:75.23:900,75,0	1/1:1,31:32:90.28:1080,90,0	1/1:1,20:21:60.17:709,60,0	1/1:0,24:24:66.20:792,66,0	1/1:3,25:28:69.21:828,69,0	0/0:14,0:14:39.13:0,39,540	0/0:24,0:24:66.20:0,66,904	0/0:25,0:25:72.24:0,72,1002	0/0:22,0:22:63.19:0,63,863	1/1:1,33:34:99:1177,99,0	1/1:0,19:19:48.15:576,48,0	1/1:0,6:6:18.06:216,18,0
chr10	14548808	.	ATGTGTGTGCGTGTGTGTGCTG	A	30463.69	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=18.501;DP=704;FS=0.000;HRun=0;HaplotypeScore=382.3973;InbreedingCoeff=0.9684;MQ=61.29;MQ0=2;MQRankSum=-14.644;QD=92.88;ReadPosRankSum=5.170;VQSLOD=3.6089;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:62,0:61:99:0,175,13647	1/1:1,11:11:15.05:874,15,0	0/0:32,0:23:57.14:0,57,3312	0/0:40,0:32:72.69:0,73,3052	1/1:3,21:24:30.57:1546,31,0	0/0:15,0:15:42.14:0,42,3646	0/0:30,0:30:84.27:0,84,5862	1/1:6,18:24:54.17:1819,54,0	1/1:1,16:17:30.10:1726,30,0	1/1:2,31:33:87.03:3920,87,0	1/1:1,27:28:51.17:2940,51,0	0/0:35,0:35:93.32:0,93,8196	0/0:18,0:18:51.17:0,51,4144	0/0:28,0:28:81.28:0,81,6664	1/1:4,24:28:54.19:3145,54,0	1/1:0,19:19:45.15:2577,45,0	1/1:4,14:18:9.03:524,9,0	1/1:4,7:11:12.04:691,12,0	1/1:5,7:12:21.07:955,21,0	1/1:0,12:12:21.07:1223,21,0	1/1:3,17:20:5.76:349,6,0	0/0:34,0:34:99:0,102,8936	0/0:27,0:27:75.26:0,75,6100	0/0:32,0:32:87.30:0,87,7972	0/0:23,0:23:66.23:0,66,6109	1/1:2,31:33:93.32:4865,93,0	1/1:1,25:26:36.12:2084,36,0	1/1:1,10:11:21.07:1223,21,0
chr10	14549127	.	TG	T	11899.55	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=19.082;DP=629;FS=6.258;HRun=1;HaplotypeScore=131.2780;InbreedingCoeff=0.9915;MQ=64.86;MQ0=0;MQRankSum=-5.886;QD=31.56;ReadPosRankSum=0.141;VQSLOD=4.1443;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,123,1813	1/1:0,11:11:33.10:392,33,0	0/0:12,0:12:34.26:0,34,424	0/0:11,0:10:10.48:0,10,318	1/1:1,30:31:90.28:1076,90,0	0/0:21,0:21:57.18:0,57,831	0/0:11,0:11:33.11:0,33,492	1/1:5,22:27:68.24:797,68,0	1/1:1,12:13:36.11:431,36,0	1/1:6,26:32:87.17:983,87,0	1/1:1,38:39:99:1131,99,0	0/0:19,0:19:54.17:0,54,785	0/0:13,0:13:39.08:0,39,521	0/0:23,0:23:69.20:0,69,989	1/1:1,14:15:36.11:431,36,0	1/1:0,23:23:66.20:791,66,0	1/1:1,37:37:99:1222,102,0	1/1:0,20:20:48.15:574,48,0	1/1:3,12:15:42.08:474,42,0	1/1:0,32:33:96.15:1100,96,0	1/1:2,11:13:27.08:324,27,0	0/0:20,0:20:60.19:0,60,873	0/0:31,0:31:93.31:0,93,1390	0/0:18,0:18:54.09:0,54,740	0/0:29,0:29:87.25:0,87,1234	1/1:0,36:36:99:1232,105,0	1/1:3,23:25:65.23:760,65,0	1/1:0,5:5:15.05:180,15,0
chr10	14549709	.	AGGAGTCATGACGTTCTAATCT	A	21543.22	PASS	AC=30;AF=0.556;AN=54;BaseQRankSum=17.384;DP=614;FS=1.131;HRun=0;HaplotypeScore=350.7062;InbreedingCoeff=0.9837;MQ=83.66;MQ0=0;MQRankSum=-16.402;QD=72.54;ReadPosRankSum=1.992;VQSLOD=3.3500;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,138,11864	1/1:0,7:7:15.05:905,15,0	0/0:26,0:26:78.24:0,78,4996	0/0:23,0:23:68.90:0,69,4489	1/1:0,21:21:33.11:1655,33,0	0/0:19,0:19:57.20:0,57,4132	0/0:25,0:25:75.26:0,75,6439	1/1:0,21:21:55.60:834,56,0	1/1:0,18:18:18.06:1024,18,0	1/1:0,32:32:65.75:3189,66,0	1/1:0,22:22:27.09:1293,27,0	0/0:32,0:32:96.33:0,96,8882	0/0:17,0:17:51.15:0,51,4422	0/0:24,0:24:72.25:0,72,6880	1/1:0,14:14:24.08:1444,24,0	1/1:1,22:23:42.14:2528,42,0	1/1:1,19:20:15:717,15,0	1/1:0,13:14:9.03:543,9,0	1/1:0,15:15:32.81:1185,33,0	1/1:0,14:14:18.06:975,18,0	1/1:0,23:24:21.07:1014,21,0	0/0:29,0:29:87.26:0,87,8046	0/0:23,0:23:69.19:0,69,5585	0/0:29,0:29:87.28:0,87,7830	0/0:21,0:20:63.22:0,63,6321	1/1:0,28:28:58.13:1947,58,0	1/1:3,21:24:38.60:2291,39,0	./.
chr10	14550161	.	G	GTT	13623.98	PASS	AB=0.556;AC=31;AF=0.554;AN=56;BaseQRankSum=7.588;DP=610;FS=0.631;HRun=2;HaplotypeScore=116.1368;InbreedingCoeff=0.9298;MQ=72.87;MQ0=0;MQRankSum=-13.260;QD=44.96;ReadPosRankSum=-2.875;VQSLOD=3.9751;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,135,1939	0/1:2,8:10:14.05:475,0,14	0/0:22,0:22:53.48:0,53,857	0/0:17,0:17:44.80:0,45,603	1/1:4,15:19:38.95:569,39,0	0/0:14,0:14:42.14:0,42,618	0/0:31,0:30:84.27:0,84,1199	1/1:6,17:23:66.21:1146,66,0	1/1:1,14:15:45.11:806,45,0	1/1:5,16:21:60.16:1077,60,0	1/1:3,10:13:32.81:348,33,0	0/0:27,0:27:78.25:0,78,1128	0/0:27,0:27:78.23:0,78,1105	0/0:20,0:20:57.19:0,57,839	1/1:8,22:30:84.16:1433,84,0	1/1:8,18:26:69.13:1108,69,0	1/1:8,17:24:60.20:1075,60,0	1/1:1,7:8:21.07:393,21,0	1/1:3,10:13:30.10:562,30,0	1/1:2,11:15:45.02:716,45,0	1/1:5,25:31:75.02:1140,75,0	0/0:16,0:16:45.12:0,45,624	0/0:20,0:20:51.17:0,51,747	0/0:41,0:41:99:0,123,1806	0/0:21,0:21:57.19:0,57,837	1/1:1,19:21:63.21:1128,63,0	1/1:3,15:18:45.13:808,45,0	1/1:0,15:15:45.15:841,45,0
chr10	14550189	.	A	AG	13662.08	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=4.613;DP=652;FS=5.328;HRun=1;HaplotypeScore=107.1010;InbreedingCoeff=0.9641;MQ=78.84;MQ0=1;MQRankSum=-13.244;QD=39.95;ReadPosRankSum=-0.996;VQSLOD=4.3085;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,129,1660	1/1:1,12:13:0.17:499,0,0	0/0:30,0:30:84.26:0,84,1057	0/0:21,0:21:60.19:0,60,766	1/1:3,19:22:56.74:851,57,0	0/0:20,0:20:60.19:0,60,776	0/0:27,0:26:78.24:0,78,997	1/1:3,17:20:57.16:813,57,0	1/1:1,22:23:63.21:940,63,0	1/1:1,24:25:75.19:1077,75,0	1/1:0,14:14:42.14:627,42,0	0/0:25,0:25:69.22:0,69,896	0/0:29,0:29:87.28:0,87,1129	0/0:17,0:17:51.15:0,51,648	1/1:2,34:36:93.31:1391,93,0	1/1:0,27:27:81.27:1212,81,0	1/1:2,27:28:75.04:1122,75,0	1/1:1,8:9:24.04:333,24,0	1/1:0,11:11:33.11:494,33,0	1/1:2,21:23:57.19:853,57,0	1/1:4,29:32:72.22:1053,72,0	0/0:14,0:14:42.09:0,42,525	0/0:22,0:22:66.20:0,66,837	0/0:39,0:39:99:0,111,1427	0/0:23,0:23:66.21:0,66,857	1/1:2,26:28:81.24:1187,81,0	1/1:0,16:16:42.14:628,42,0	1/1:0,13:13:39.13:583,39,0
chr10	14550347	.	TGTAA	T	2553.55	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-8.132;DP=732;FS=6.503;HRun=0;HaplotypeScore=199.1626;InbreedingCoeff=0.9992;MQ=83.09;MQ0=0;MQRankSum=-0.522;QD=46.43;ReadPosRankSum=1.067;VQSLOD=3.8220;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,129,3381	0/0:9,0:9:27.05:0,27,654	0/0:28,0:28:81.22:0,81,2017	0/0:25,0:25:75.21:0,75,1764	0/0:29,0:29:87.24:0,87,2213	1/1:1,20:21:48.16:930,48,0	1/1:1,33:34:90.78:1745,91,0	0/0:22,0:21:60.21:0,60,1551	0/0:21,0:21:63.22:0,63,1700	0/0:46,0:46:99:0,138,3656	0/0:29,0:29:87.22:0,87,2256	0/0:23,0:23:69.24:0,69,1862	0/0:30,0:30:90.31:0,90,2372	0/0:24,0:24:69.24:0,69,1869	0/0:40,0:40:99:0,120,3199	0/0:26,0:26:78.24:0,78,1998	0/0:29,0:29:87.30:0,87,2306	0/0:15,0:15:45.15:0,45,1231	0/0:12,0:12:33.11:0,33,898	0/0:20,0:20:57.20:0,57,1524	0/0:48,0:48:99:0,144,3855	0/0:24,0:24:72.25:0,72,1902	0/0:23,0:23:66.21:0,66,1680	0/0:38,0:37:99:0,111,3015	0/0:18,0:18:54.19:0,54,1478	0/0:28,0:28:81.28:0,81,2174	0/0:13,0:13:39.13:0,39,1047	0/0:12,0:12:36.01:0,36,793
chr10	14550634	.	CGTGTGTGTGT	C	8028.96	PASS	AB=0.615;AC=31;AF=0.554;AN=56;BaseQRankSum=7.435;DP=795;FS=11.062;HRun=0;HaplotypeScore=283.0618;InbreedingCoeff=0.8853;MQ=58.08;MQ0=14;MQRankSum=-9.320;QD=18.04;ReadPosRankSum=-1.078;VQSLOD=2.2080;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:34:36.12:0,36,1188	1/1:5,12:17:17.83:472,18,0	0/0:18,0:13:6.02:0,6,146	0/0:24,0:14:9.03:0,9,249	0/1:9,15:22:0.11:0,0,0	0/0:18,0:21:22.17:0,22,483	0/0:28,0:40:32.39:0,32,459	1/1:26,12:37:23.31:166,23,0	1/1:9,12:20:33.11:766,33,0	1/1:22,12:32:45.14:1241,45,0	1/1:10,21:31:9.01:218,9,0	0/0:15,0:27:42.14:0,42,1178	0/0:10,0:25:6.44:0,6,913	0/0:19,0:35:66.21:0,66,1936	1/1:17,13:27:30.10:600,30,0	1/1:9,27:28:29.87:607,30,0	1/1:11,2:13:2.34:176,2,0	1/1:10,5:14:14.90:239,15,0	1/1:16,5:21:12.01:293,12,0	1/1:9,19:28:15.05:387,15,0	1/1:41,4:42:8.87:171,9,0	0/0:10,0:29:26.37:0,26,698	0/0:9,0:21:39.13:0,39,1153	0/0:20,0:50:62.15:0,62,1612	0/0:10,0:21:36.11:0,36,961	1/1:11,26:36:50.90:1221,51,0	1/1:16,17:32:33.10:976,33,0	1/1:6,12:17:23.97:496,24,0
chr10	14550740	.	T	TTG	3991.86	PASS	AB=0.833;AC=19;AF=0.339;AN=56;BaseQRankSum=-3.798;DP=982;FS=0.000;HRun=0;HaplotypeScore=157.4651;InbreedingCoeff=-0.3390;MQ=50.94;MQ0=88;MQRankSum=2.186;QD=7.32;ReadPosRankSum=1.999;VQSLOD=2.9009;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:33:81.14:0,81,928	0/1:6,0:5:59.34:82,0,59	0/1:54,0:12:0:0,0,0	0/0:76,0:19:6.85:0,7,38	0/1:18,5:20:99:277,0,102	0/1:23,2:19:71.78:72,0,96	0/0:40,0:34:24.07:0,24,293	0/1:36,8:24:12.84:297,0,13	0/1:25,10:28:99:275,0,149	0/1:37,6:36:99:502,0,142	0/1:18,4:18:58.76:107,0,59	0/0:47,0:47:99:0,117,1335	0/0:39,0:39:87.24:0,87,1051	0/0:46,0:46:99:0,108,1260	0/1:33,6:32:99:248,0,118	0/1:23,7:22:37.39:386,0,37	0/1:16,20:32:99:339,0,161	0/1:16,2:15:61.78:86,0,62	1/1:14,3:7:3.01:49,3,0	0/1:16,5:19:99:204,0,174	0/1:49,31:69:99:163,0,197	0/0:31,0:29:51.09:0,51,600	0/0:20,0:20:41.92:0,42,468	0/0:76,0:75:99:0,177,2079	0/0:25,0:25:59.98:0,60,697	0/1:17,3:16:71.42:192,0,71	0/1:14,6:20:99:500,0,115	0/1:5,4:8:16.82:214,0,17
chr10	14550928	.	TTG	T	1298.97	PASS	AB=0.884;AC=32;AF=0.667;AN=48;BaseQRankSum=3.144;DP=786;FS=3.232;HRun=0;HaplotypeScore=70.4371;InbreedingCoeff=0.5137;MQ=28.97;MQ0=259;MQRankSum=-3.480;QD=3.45;ReadPosRankSum=0.293;VQSLOD=2.0346;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:29:57.17:0,57,830	1/1:6,2:1:3.01:37,3,0	./.	./.	1/1:10,1:4:2.19:8,2,0	1/1:8,3:8:8.83:110,9,0	./.	1/1:29,7:5:15.04:174,15,0	1/1:15,3:9:12.01:122,12,0	1/1:22,0:8:0.18:32,0,0	1/1:7,1:7:6.01:74,6,0	0/0:55,0:30:57.19:0,57,914	0/1:32,0:14:0.57:1,0,475	0/0:39,0:20:48.14:0,48,754	1/1:24,7:13:14.86:160,15,0	1/1:11,13:9:14.80:157,15,0	1/1:14,2:6:5.60:47,6,0	1/1:3,7:4:3.01:37,3,0	1/1:11,2:3:5.93:54,6,0	./.	0/1:37,19:18:8.96:9,0,43	0/1:35,0:17:3.72:4,0,402	0/0:26,0:13:32.76:0,33,440	0/0:58,0:29:39:0,39,547	0/0:28,1:14:21.91:0,22,273	1/1:12,5:5:12.03:138,12,0	1/1:12,2:6:12.04:143,12,0	0/1:11,4:14:30.89:161,0,31
chr10	14551000	.	GTGTC	G	2714.82	PASS	AB=0.621;AC=25;AF=0.500;AN=50;BaseQRankSum=7.675;DP=824;FS=8.650;HRun=0;HaplotypeScore=97.9506;InbreedingCoeff=0.6202;MQ=30.98;MQ0=230;MQRankSum=-8.297;QD=10.52;ReadPosRankSum=2.363;VQSLOD=2.3294;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:32:44.30:0,44,1094	0/1:0,4:4:0:0,0,0	./.	./.	0/1:4,9:6:0.03:0,0,0	0/0:34,0:16:48.16:0,48,1277	0/0:51,0:11:12.04:0,12,315	0/1:17,9:13:99:363,0,133	1/1:6,9:9:3.47:178,3,0	1/1:15,13:15:14.16:596,14,0	1/1:5,8:5:9.03:146,9,0	0/0:52,0:27:66.18:0,66,1456	0/0:43,0:28:73.34:0,73,1729	0/0:39,0:30:84.25:0,84,2039	1/1:6,18:11:5.94:56,6,0	1/1:5,10:7:9.03:150,9,0	1/1:5,7:2:6.02:113,6,0	1/1:4,11:6:15.05:266,15,0	1/1:7,9:9:21.07:398,21,0	1/1:5,9:3:2.98:35,3,0	0/1:14,26:22:0.40:119,0,0	0/0:40,0:22:54.19:0,54,1413	0/0:47,0:21:45.12:0,45,982	0/0:69,0:39:81.15:0,81,1903	0/0:27,0:14:42.13:0,42,1069	0/1:8,8:10:73.69:351,0,74	1/1:0,7:5:8.24:120,8,0	./.
chr10	14551058	.	GTGTC	G	5615.95	PASS	AB=0.707;AC=30;AF=0.577;AN=52;BaseQRankSum=9.170;DP=782;FS=3.655;HRun=0;HaplotypeScore=131.3893;InbreedingCoeff=0.8162;MQ=35.78;MQ0=203;MQRankSum=-1.717;QD=19.50;ReadPosRankSum=-1.416;VQSLOD=4.4588;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:30:65.79:0,66,1345	1/1:4,2:5:10.81:117,11,0	./.	./.	1/1:6,4:9:8.93:124,9,0	0/0:43,0:26:60.19:0,60,1469	0/0:43,0:12:27.04:0,27,468	1/1:2,11:9:27.05:344,27,0	1/1:10,18:16:33.56:437,34,0	1/1:13,14:13:38.16:467,38,0	0/1:9,6:11:38.16:92,0,38	0/0:43,0:28:51.03:0,51,1087	0/0:35,0:26:68.83:0,69,1405	0/0:45,0:33:69.21:0,69,1754	1/1:9,16:15:36.04:495,36,0	1/1:8,14:14:35.92:480,36,0	1/1:4,18:16:42.02:658,42,0	1/1:5,10:7:12.51:209,13,0	1/1:3,6:8:15.03:225,15,0	1/1:6,4:7:12.01:172,12,0	1/1:17,16:17:26.60:396,27,0	0/0:37,0:24:56.06:0,56,1320	0/0:18,0:12:33.06:0,33,781	0/0:51,0:38:93.25:0,93,2282	0/0:18,0:14:33.11:0,33,824	0/1:16,12:21:23.50:663,0,24	1/1:6,8:10:23.36:305,23,0	1/1:4,7:10:29.91:431,30,0
chr10	14551134	.	G	GTA	19279.76	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=-7.644;DP=941;FS=32.320;HRun=0;HaplotypeScore=201.1878;InbreedingCoeff=0.9959;MQ=55.72;MQ0=15;MQRankSum=0.156;QD=36.45;ReadPosRankSum=3.608;VQSLOD=2.6788;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:40:90.09:0,90,1195	1/1:2,13:15:33.11:603,33,0	0/0:44,0:24:13.10:0,13,488	0/0:40,0:25:45.21:0,45,502	1/1:2,32:35:60.10:1063,60,0	0/0:30,0:30:66.21:0,66,941	0/0:34,0:33:57.18:0,57,775	1/1:4,40:39:99:1611,111,0	1/1:9,22:29:72.09:1243,72,0	1/1:15,38:51:99:2424,144,0	1/1:4,20:24:45.06:821,45,0	0/0:33,0:33:60.08:0,60,830	0/0:24,0:24:54.15:0,54,732	0/0:37,0:37:75.12:0,75,993	1/1:17,32:41:95.84:1614,96,0	1/1:10,23:27:62.67:1103,63,0	1/1:10,15:25:63.19:1069,63,0	1/1:8,12:18:48.11:829,48,0	1/1:13,3:12:21.02:308,21,0	1/1:2,33:37:63.20:1120,63,0	1/1:25,39:60:99:2125,123,0	0/0:36,0:36:78.22:0,78,1090	0/0:21,0:20:54.17:0,54,751	0/0:49,0:49:99:0,108,1305	0/0:22,0:22:51.12:0,51,710	1/1:19,26:42:99:1890,114,0	1/1:3,23:25:42.16:855,42,0	1/1:3,8:11:33.11:602,33,0
chr10	14551140	.	ATCTC	A	1467.68	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-1.502;DP=871;FS=1.485;HRun=0;HaplotypeScore=275.6995;InbreedingCoeff=0.9993;MQ=57.69;MQ0=7;MQRankSum=-0.219;QD=24.88;ReadPosRankSum=0.812;VQSLOD=2.9502;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:39:78.27:0,78,1975	0/0:15,0:15:30.10:0,30,763	0/0:39,0:25:54.41:0,54,1200	0/0:36,0:26:50.12:0,50,1092	0/0:35,0:35:60.71:0,61,1536	1/1:3,25:28:51.16:901,51,0	1/1:5,26:31:39.13:689,39,0	0/0:42,0:39:99:0,108,2660	0/0:28,0:28:69.24:0,69,1770	0/0:52,0:51:99:0,138,3345	0/0:21,0:21:47.98:0,48,1144	0/0:29,0:30:54.19:0,54,1379	0/0:19,0:19:51.18:0,51,1279	0/0:34,0:34:66.23:0,66,1669	0/0:45,0:39:90.31:0,90,2190	0/0:29,0:24:48.15:0,48,1167	0/0:24,0:24:60.21:0,60,1431	0/0:18,0:17:48.16:0,48,1214	0/0:14,0:12:30.10:0,30,770	0/0:35,0:35:66.23:0,66,1670	0/0:59,0:58:99:0,117,2874	0/0:34,0:34:66.23:0,66,1666	0/0:20,0:19:42.01:0,42,1077	0/0:43,0:43:84.23:0,84,2123	0/0:21,0:21:51.16:0,51,1189	0/0:40,0:38:93.31:0,93,2327	0/0:23,0:24:42.09:0,42,1005	0/0:12,0:12:36.12:0,36,913
chr10	14551196	.	A	AGTGTGT	6732.53	PASS	AB=0.756;AC=45;AF=0.804;AN=56;BaseQRankSum=1.065;DP=853;FS=3.549;HRun=0;HaplotypeScore=228.3670;InbreedingCoeff=0.3742;MQ=52.99;MQ0=19;MQRankSum=-4.380;QD=8.73;ReadPosRankSum=-1.104;VQSLOD=3.8771;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:23,13:38:49.29:178,0,49	1/1:7,0:13:2.99:24,3,0	1/1:44,0:18:0.89:2,1,0	0/1:57,0:31:0:0,0,0	1/1:24,0:21:15.03:239,15,0	0/0:30,0:32:44.93:0,45,784	0/0:31,0:36:51.64:0,52,916	1/1:37,0:35:27.07:396,27,0	1/1:29,1:29:23.53:303,24,0	1/1:38,2:36:42.13:875,42,0	1/1:20,1:19:3.01:71,3,0	1/1:17,7:26:21.07:548,21,0	0/1:14,3:27:28.14:535,0,28	0/1:15,9:25:24.68:426,0,25	1/1:31,3:28:12.51:351,13,0	1/1:13,0:17:9.03:235,9,0	1/1:31,1:32:29.74:708,30,0	1/1:20,0:17:12.04:236,12,0	0/0:14,0:12:2.99:0,3,25	1/1:28,0:32:3:25,3,0	1/1:46,2:46:8.97:138,9,0	1/1:26,8:39:11.81:226,12,0	0/1:11,8:16:0.05:1,0,0	1/1:28,4:44:14.93:241,15,0	1/1:9,10:18:11.83:355,12,0	1/1:19,11:29:20.97:403,21,0	1/1:11,0:11:6.02:119,6,0	1/1:12,5:14:3.01:97,3,0
chr10	14552218	.	G	GTTGT	23444.33	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=4.054;DP=587;FS=4.187;HRun=0;HaplotypeScore=140.6734;InbreedingCoeff=0.9112;MQ=70.05;MQ0=0;MQRankSum=-9.553;QD=43.50;ReadPosRankSum=4.934;VQSLOD=5.4780;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:11,32:46:81.04:1719,81,0	1/1:2,15:17:30.10:764,30,0	0/0:24,0:24:57.19:0,57,951	0/0:23,0:22:51.01:0,51,789	1/1:4,19:26:51.17:1214,51,0	1/1:4,17:21:42.14:1027,42,0	1/1:5,11:18:28.99:669,29,0	1/1:13,16:33:60.17:1268,60,0	1/1:2,19:23:51.18:1297,51,0	1/1:8,13:24:48.07:1055,48,0	1/1:4,15:19:42.01:946,42,0	1/1:3,10:13:27.09:688,27,0	1/1:4,11:17:33.11:816,33,0	1/1:2,14:17:33.11:832,33,0	1/1:4,23:26:51.17:1299,51,0	1/1:1,17:19:42.14:1069,42,0	1/1:4,9:16:24.08:611,24,0	1/1:4,9:18:27:574,27,0	1/1:4,8:17:39.04:751,39,0	1/1:7,16:25:50.95:948,51,0	1/1:8,9:19:27.09:572,27,0	1/1:4,5:11:21.07:473,21,0	1/1:2,14:20:42.06:959,42,0	1/1:5,10:18:27:577,27,0	1/1:3,13:16:39.07:911,39,0	1/1:5,19:25:59.94:1411,60,0	1/1:6,17:24:36.12:917,36,0	1/1:7,1:9:3.01:76,3,0
chr10	14552428	.	AGGAGAACTAACCTTT	A	9926.17	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=13.398;DP=529;FS=10.826;HRun=0;HaplotypeScore=220.0541;InbreedingCoeff=0.9926;MQ=87.88;MQ0=0;MQRankSum=-12.030;QD=93.64;ReadPosRankSum=0.941;VQSLOD=3.5857;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,23:26:51.18:2162,51,0	0/0:9,0:9:24.08:0,24,1625	0/0:22,0:22:66.23:0,66,3028	0/0:22,0:22:60.21:0,60,3787	0/0:28,0:28:84.27:0,84,5646	0/0:18,0:18:51.16:0,51,3426	0/0:24,0:24:72.25:0,72,4265	0/0:21,0:21:60.21:0,60,3530	0/0:20,0:20:60.21:0,60,4004	0/0:26,0:26:75.26:0,75,5173	0/0:26,0:26:78.27:0,78,5525	1/1:2,10:12:30.10:1307,30,0	1/1:1,8:9:18.06:808,18,0	1/1:0,5:5:15.05:647,15,0	0/0:17,0:17:48.16:0,48,3503	0/0:19,0:19:57.15:0,57,3743	0/0:27,0:27:78.24:0,78,5400	0/0:24,0:24:72.25:0,72,4903	0/0:17,0:17:48.16:0,48,2962	0/0:29,0:29:87.28:0,87,5635	0/0:16,0:16:48.16:0,48,3447	1/1:1,20:21:51.13:2122,51,0	1/1:2,11:13:30.10:1350,30,0	1/1:3,5:8:15.48:450,15,0	1/1:2,10:12:24.08:1080,24,0	0/0:27,0:27:78.27:0,78,5595	0/0:21,0:21:60.19:0,60,3770	0/0:10,0:10:30.10:0,30,2176
chr10	14552801	.	AAGCTGTATTC	A	25711.76	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=19.508;DP=621;FS=1.370;HRun=0;HaplotypeScore=202.9587;InbreedingCoeff=0.9984;MQ=72.07;MQ0=0;MQRankSum=-15.782;QD=74.10;ReadPosRankSum=2.715;VQSLOD=4.4965;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,105,5229	1/1:2,12:14:33.11:1086,33,0	0/0:21,0:21:51.15:0,51,2205	0/0:11,0:11:30.10:0,30,1376	1/1:3,31:34:90.22:2709,90,0	0/0:18,0:18:54.19:0,54,2708	0/0:35,0:35:99:0,105,5000	1/1:2,27:29:81.23:1991,81,0	1/1:0,20:20:42.14:1383,42,0	1/1:2,26:28:81.23:2353,81,0	1/1:2,23:25:63.17:1960,63,0	0/0:16,0:16:45.15:0,45,2213	0/0:22,0:22:60.21:0,60,2976	0/0:12,0:12:33.11:0,33,1718	1/1:0,24:24:54.19:1776,54,0	1/1:1,15:16:39.13:1283,39,0	1/1:4,18:22:36.12:1113,36,0	1/1:0,9:9:27.09:888,27,0	1/1:2,15:17:45.13:980,45,0	1/1:3,26:29:78.27:2561,78,0	1/1:1,14:15:18.06:564,18,0	0/0:30,0:30:84.29:0,84,3981	0/0:26,0:26:69.24:0,69,3473	0/0:22,0:22:66.23:0,66,3320	0/0:25,0:25:69.24:0,69,3480	1/1:1,26:27:78.21:2299,78,0	1/1:2,24:26:57.20:1877,57,0	1/1:3,9:12:27.09:888,27,0
chr10	14553468	.	TC	T	8094.36	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-15.149;DP=723;FS=0.969;HRun=1;HaplotypeScore=110.9752;InbreedingCoeff=0.9997;MQ=85.11;MQ0=1;MQRankSum=-0.913;QD=38.36;ReadPosRankSum=3.165;VQSLOD=4.8217;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,51:51:99:2013,144,0	0/0:12,0:12:36.12:0,36,575	0/0:27,0:27:78.17:0,78,1156	0/0:17,0:17:24.68:0,25,554	0/0:26,0:26:75.24:0,75,1170	0/0:18,0:18:54.18:0,54,860	0/0:22,0:22:66.19:0,66,1000	0/0:35,0:35:99:0,102,1630	0/0:27,0:27:81.28:0,81,1290	0/0:31,0:31:90.31:0,90,1438	0/0:22,0:22:63.21:0,63,1001	1/1:0,24:24:69.23:964,69,0	1/1:0,13:13:39.13:545,39,0	1/1:0,21:21:48.16:671,48,0	0/0:23,0:23:69.24:0,69,1101	0/0:28,0:28:84.24:0,84,1273	0/0:42,0:42:99:0,126,1889	0/0:31,0:31:90.31:0,90,1424	0/0:21,0:21:63.21:0,63,1006	0/0:29,0:29:87.30:0,87,1391	0/0:41,0:40:99:0,114,1795	1/1:0,25:25:63.21:881,63,0	1/1:0,21:21:57.19:797,57,0	1/1:0,34:34:99:1384,99,0	1/1:0,22:22:60.20:839,60,0	0/0:20,0:20:60.20:0,60,958	0/0:26,0:26:78.24:0,78,1219	0/0:14,0:13:39.13:0,39,623
chr10	14555035	.	T	TC	1841.43	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-9.158;DP=607;FS=5.095;HRun=5;HaplotypeScore=59.2698;InbreedingCoeff=0.9954;MQ=81.19;MQ0=0;MQRankSum=-4.253;QD=30.19;ReadPosRankSum=0.392;VQSLOD=4.1799;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:72.18:0,72,774	0/0:9,0:9:21.05:0,21,226	0/0:24,0:25:57.09:0,57,584	0/0:22,0:22:33.53:0,34,413	0/0:29,0:29:87.20:0,87,925	1/1:1,25:26:72.23:937,72,0	1/1:2,33:35:78.04:1026,78,0	0/0:25,0:25:66.14:0,66,690	0/0:16,0:16:48.10:0,48,507	0/0:20,0:20:53.81:0,54,559	0/0:13,0:13:30.05:0,30,312	0/0:19,0:19:52.37:0,52,551	0/0:22,0:22:63.16:0,63,677	0/0:18,0:18:54.12:0,54,568	0/0:15,0:15:42.10:0,42,451	0/0:27,0:27:78.20:0,78,838	0/0:27,0:27:69.17:0,69,742	0/0:26,0:26:75.19:0,75,805	0/0:22,0:22:60.15:0,60,645	0/0:10,0:10:24.06:0,24,257	0/0:33,0:33:84.21:0,84,902	0/0:21,0:21:60.15:0,60,645	0/0:18,0:18:54.14:0,54,579	0/0:28,0:28:78.19:0,78,838	0/0:16,0:16:45.07:0,45,471	0/0:19,0:19:51.12:0,51,542	0/0:27,0:27:78.18:0,78,830	0/0:8,0:8:24.06:0,24,258
chr10	14555898	.	AGAACC	A	2870.75	PASS	AB=0.971;AC=17;AF=0.304;AN=56;BaseQRankSum=6.781;DP=484;FS=69.024;HRun=0;HaplotypeScore=95.6218;InbreedingCoeff=-0.4307;MQ=42.29;MQ0=17;MQRankSum=-2.284;QD=8.92;ReadPosRankSum=-1.322;VQSLOD=-0.7525;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:34:67.11:0,67,1298	0/1:11,0:9:33.97:34,0,357	0/0:5,0:4:11.94:0,12,110	0/0:4,0:4:8.55:0,9,60	0/1:29,2:29:99:350,0,706	0/0:19,0:18:44.86:0,45,832	0/0:17,0:16:18.46:0,18,798	0/1:25,1:26:99:329,0,882	0/1:15,0:14:59.57:60,0,554	0/1:20,11:30:99:573,0,1233	0/1:18,0:18:99:167,0,496	0/0:16,0:15:41.86:0,42,923	0/0:4,0:4:12.04:0,12,282	0/0:18,0:17:49.33:0,49,837	0/1:12,0:12:52.96:53,0,506	0/1:14,0:14:99:250,0,324	0/1:27,0:25:4.70:5,0,600	0/1:15,2:16:99:200,0,444	0/1:15,0:12:46.13:46,0,465	0/1:32,0:29:99:250,0,1136	0/1:4,0:4:37.41:37,0,121	0/1:15,0:15:7.46:7,0,576	0/0:18,0:16:42.11:0,42,791	0/0:16,0:13:26.99:0,27,572	0/0:7,0:7:21.07:0,21,396	0/1:22,0:22:99:378,0,813	0/1:18,0:16:99:192,0,406	0/1:13,0:13:98.10:98,0,509
chr10	14557145	.	CT	C	8772.30	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=14.982;DP=790;FS=2.044;HRun=1;HaplotypeScore=75.0000;InbreedingCoeff=1.0000;MQ=82.67;MQ0=0;MQRankSum=-1.717;QD=36.70;ReadPosRankSum=3.474;VQSLOD=5.4659;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,48:48:99:1716,123,0	0/0:14,0:14:42.10:0,42,602	0/0:25,0:25:61.53:0,62,1022	0/0:19,0:19:54.15:0,54,836	0/0:31,0:31:90.12:0,90,1406	0/0:24,0:24:69.24:0,69,1102	0/0:29,0:29:87.27:0,87,1343	0/0:17,0:17:48.15:0,48,728	0/0:37,0:37:99:0,111,1748	0/0:45,0:45:99:0,135,2126	0/0:16,0:16:48.15:0,48,744	1/1:0,20:20:48.16:669,48,0	1/1:0,26:26:66.22:914,66,0	1/1:0,26:26:78.26:1088,78,0	0/0:37,0:37:99:0,111,1728	0/0:37,0:37:99:0,111,1772	0/0:22,0:22:66.23:0,66,1054	0/0:23,0:23:69.22:0,69,1078	0/0:25,0:25:72.21:0,72,1086	0/0:28,0:28:84.29:0,84,1338	0/0:42,0:42:99:0,123,1952	1/1:0,27:27:66.22:917,66,0	1/1:0,24:24:66.06:914,66,0	1/1:0,40:40:99:1507,108,0	1/1:0,28:28:75.25:1047,75,0	0/0:30,0:30:81.20:0,81,1326	0/0:37,0:37:99:0,111,1695	0/0:13,0:13:39.08:0,39,550
chr10	14558069	.	G	GTTTT	10407.98	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=-8.483;DP=552;FS=2.182;HRun=10;HaplotypeScore=116.2439;InbreedingCoeff=0.9760;MQ=69.86;MQ0=1;MQRankSum=-6.440;QD=36.14;ReadPosRankSum=-5.544;VQSLOD=2.4996;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:50:53.36:0,53,272	1/1:6,8:14:27.13:561,27,0	0/0:16,0:15:16.71:0,17,180	0/0:15,0:11:17.50:0,18,154	1/1:7,5:16:27.72:494,28,0	0/0:26,0:29:73.38:0,73,984	0/0:23,0:23:60.14:0,60,849	1/1:13,9:24:33.09:619,33,0	1/1:8,9:20:33.11:710,33,0	1/1:8,14:27:57.14:1025,57,0	1/1:3,5:9:21.07:397,21,0	0/0:5,0:19:16.13:0,16,40	0/0:2,0:13:14.22:0,14,70	0/0:2,0:11:9.95:0,10,25	1/1:3,8:12:21.07:430,21,0	1/1:3,10:14:30.10:706,30,0	1/1:10,13:26:42.14:896,42,0	1/1:7,18:27:56:1210,56,0	1/1:12,6:24:52.55:886,53,0	1/1:8,5:14:20.28:353,20,0	1/1:9,9:18:34.29:616,34,0	0/0:3,0:26:23.17:0,23,97	0/0:4,0:11:14.69:0,15,106	0/0:3,0:28:32.51:0,33,116	0/0:4,0:21:14.47:0,14,38	1/1:7,9:18:39.08:733,39,0	1/1:8,7:18:24.05:468,24,0	1/1:2,4:7:15.05:305,15,0
chr10	14561128	.	T	TG	482.26	PASS	AB=1.000;AC=6;AF=0.107;AN=56;BaseQRankSum=-2.091;DP=552;FS=3.819;HRun=1;HaplotypeScore=142.8867;InbreedingCoeff=0.6068;MQ=60.05;MQ0=4;MQRankSum=-1.253;QD=6.10;ReadPosRankSum=-1.964;VQSLOD=-0.0790;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:27:23.98:0,24,224	0/0:11,0:11:29.87:0,30,169	0/0:29,0:13:12.28:0,12,131	0/1:23,0:14:22.71:23,0,111	0/0:33,0:33:73.08:0,73,396	1/1:11,3:14:21.83:191,22,0	1/1:23,2:25:60.59:393,61,0	0/0:31,0:30:83.51:0,84,605	0/0:9,0:9:18.50:0,19,85	0/0:37,0:36:74.64:0,75,416	0/0:18,0:17:34.26:0,34,174	0/0:6,0:6:8.69:0,9,62	0/0:17,0:17:27.19:0,27,144	0/0:13,0:12:24.73:0,25,159	0/0:27,0:26:68.09:0,68,374	0/0:23,0:23:46.46:0,46,283	0/0:26,0:26:63.19:0,63,387	0/0:18,0:16:37.12:0,37,206	0/0:20,0:18:42.22:0,42,284	0/0:25,0:24:60.39:0,60,331	0/0:13,0:13:31.99:0,32,211	0/0:8,0:10:20.95:0,21,150	0/0:14,0:14:19.28:0,19,175	0/0:11,0:10:15.70:0,16,108	0/1:15,0:16:9.54:10,0,75	0/0:25,0:23:51.64:0,52,336	0/0:16,0:15:38.71:0,39,206	0/0:11,0:11:32.11:0,32,220
chr10	14561136	.	T	TTG	9883.05	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=-4.056;DP=559;FS=3.101;HRun=0;HaplotypeScore=123.9754;InbreedingCoeff=0.9812;MQ=51.69;MQ0=7;MQRankSum=1.312;QD=29.15;ReadPosRankSum=6.024;VQSLOD=6.0872;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:26:28.45:0,28,245	1/1:11,0:11:18.86:359,19,0	0/0:43,0:12:19.57:0,20,142	0/0:30,0:14:17.27:0,17,145	1/1:23,8:33:68.51:1012,69,0	0/0:14,0:14:13.03:0,13,144	0/0:21,0:20:52.45:0,52,398	1/1:22,0:21:44.21:584,44,0	1/1:11,0:11:29.94:367,30,0	1/1:37,0:36:75.84:1166,76,0	1/1:20,0:19:30.08:510,30,0	0/0:11,0:11:28.26:0,28,165	0/0:17,0:17:15.31:0,15,99	0/0:13,0:12:18.67:0,19,183	1/1:26,1:26:67.51:882,68,0	1/1:19,0:20:39.12:551,39,0	1/1:24,0:24:56.50:663,56,0	1/1:17,0:15:37.52:485,38,0	1/1:21,0:19:45.58:563,46,0	1/1:28,0:27:55.02:805,55,0	1/1:12,0:12:30.05:381,30,0	0/0:6,0:6:10.72:0,11,73	0/0:13,0:13:22.69:0,23,138	0/0:11,0:10:17.19:0,17,103	0/0:14,0:14:21:0,21,118	1/1:28,0:26:62.39:731,62,0	1/1:15,0:14:21.24:497,21,0	1/1:11,0:11:26.95:328,27,0
chr10	14561137	.	T	TG	3829.65	PASS	AB=0.679;AC=30;AF=0.536;AN=56;BaseQRankSum=1.144;DP=559;FS=2.355;HRun=0;HaplotypeScore=137.0368;InbreedingCoeff=0.7358;MQ=51.49;MQ0=8;MQRankSum=0.277;QD=10.88;ReadPosRankSum=7.548;VQSLOD=3.8087;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:26:29.98:0,30,262	1/1:5,6:11:10.07:122,10,0	0/0:44,0:13:20.43:0,20,181	0/0:32,0:15:1.48:0,1,116	1/1:16,18:33:42.53:352,43,0	0/0:14,0:14:19.78:0,20,165	0/0:22,0:21:36.91:0,37,295	1/1:4,18:21:24.33:265,24,0	0/1:3,8:11:0.96:98,0,1	1/1:14,24:36:28.18:438,28,0	0/1:5,16:20:4.38:182,0,4	0/0:11,0:11:28.23:0,28,159	0/0:16,0:16:24.50:0,25,131	0/0:12,0:11:26.99:0,27,172	1/1:11,16:26:25.28:315,25,0	1/1:9,11:20:37.88:255,38,0	1/1:9,13:22:42.57:303,43,0	1/1:5,13:16:16.87:184,17,0	1/1:10,11:19:3.83:223,4,0	1/1:12,15:26:32.52:289,33,0	1/1:5,7:12:29.46:198,29,0	0/0:6,0:6:15.27:0,15,99	0/0:13,0:13:17.01:0,17,139	0/0:10,0:9:15.20:0,15,98	0/1:14,0:14:6.30:6,0,58	1/1:15,14:27:10.57:255,11,0	0/1:4,12:15:0.52:185,0,1	1/1:3,6:9:18.45:159,18,0
chr10	14561140	.	T	TG	5093.90	PASS	AB=1.000;AC=35;AF=0.625;AN=56;BaseQRankSum=2.169;DP=547;FS=6.003;HRun=0;HaplotypeScore=131.4944;InbreedingCoeff=0.7994;MQ=49.49;MQ0=8;MQRankSum=0.874;QD=12.99;ReadPosRankSum=6.414;VQSLOD=5.3576;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:24:23.90:0,24,202	1/1:4,6:11:13.86:125,14,0	0/0:43,0:13:27.66:0,28,211	0/1:34,0:15:36.36:36,0,58	1/1:12,18:29:48.54:428,49,0	0/1:15,0:15:1.78:2,0,104	0/0:21,0:20:25.10:0,25,228	1/1:9,11:20:17.41:241,17,0	1/1:4,8:12:32.52:233,33,0	1/1:12,25:35:54.80:567,55,0	1/1:9,12:20:13.07:273,13,0	0/0:11,0:11:25.76:0,26,124	0/0:16,0:16:20.93:0,21,123	0/0:12,0:11:24.41:0,24,139	1/1:10,16:26:61.25:492,61,0	1/1:2,11:19:35.86:286,36,0	1/1:8,13:21:36.32:327,36,0	1/1:4,13:16:23.03:281,23,0	1/1:10,10:19:34:280,34,0	1/1:3,15:27:53.17:419,53,0	1/1:6,6:12:28.91:214,29,0	0/0:6,0:6:15.22:0,15,92	0/0:12,0:12:17.01:0,17,139	0/0:9,0:8:12.11:0,12,69	0/1:14,0:14:6.27:6,0,51	1/1:14,14:26:32.92:406,33,0	1/1:2,13:15:34.32:309,34,0	1/1:1,6:7:20.89:169,21,0
chr10	14561141	.	T	TG	931.15	PASS	AB=0.965;AC=23;AF=0.411;AN=56;BaseQRankSum=4.199;DP=539;FS=14.126;HRun=0;HaplotypeScore=144.5558;InbreedingCoeff=-0.0819;MQ=49.49;MQ0=8;MQRankSum=-2.493;QD=2.64;ReadPosRankSum=6.305;VQSLOD=1.9460;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:21.08:0,21,175	0/1:11,0:11:16.70:57,0,17	0/0:42,0:13:28.27:0,28,214	0/0:34,0:15:16.23:0,16,161	0/1:30,0:29:30.29:79,0,30	0/1:8,5:14:52.10:52,0,53	0/1:16,5:20:94.19:153,0,94	0/1:21,0:20:10.74:110,0,11	0/1:12,0:12:7.84:8,0,52	0/1:38,0:36:71.89:72,0,81	0/1:21,0:20:34.85:35,0,73	0/0:11,0:11:21.38:0,21,103	0/0:15,0:16:24.85:0,25,128	0/0:12,0:11:24.68:0,25,140	0/1:27,0:26:26.31:79,0,26	1/1:17,0:17:10.69:56,11,0	1/1:15,3:18:4.82:52,5,0	0/1:17,0:16:6.61:7,0,18	0/1:20,0:18:35.55:57,0,36	0/1:27,0:27:4.82:121,0,5	1/1:12,0:12:9.09:52,9,0	0/0:6,0:6:14.77:0,15,84	0/0:11,0:12:17.02:0,17,139	0/1:9,0:8:4.58:5,0,33	0/1:13,0:13:15.48:39,0,15	0/0:28,0:26:18.50:0,18,99	1/1:16,0:15:10.98:52,11,0	0/1:7,0:7:10.41:19,0,10
chr10	14561218	.	G	GA	146	PASS	AB=0.860;AC=4;AF=0.074;AN=54;BaseQRankSum=4.875;DP=659;FS=3.350;HRun=0;HaplotypeScore=75.5981;InbreedingCoeff=-0.0852;MQ=43.08;MQ0=112;MQRankSum=-2.853;QD=1.97;ReadPosRankSum=2.276;VQSLOD=1.9592;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:40,1:26:57.18:0,57,778	0/1:8,1:7:29.60:30,0,192	0/0:7,0:1:3.01:0,3,42	./.	0/0:18,1:16:30.10:0,30,417	0/0:36,2:27:57.19:0,57,796	0/0:24,3:14:39.13:0,39,538	0/0:25,0:24:66.21:0,66,897	0/0:30,3:31:33.47:0,33,984	0/0:25,0:20:60.20:0,60,832	0/0:17,0:16:24.08:0,24,335	0/0:21,2:19:45.15:0,45,628	0/1:10,5:14:99:158,0,238	0/0:23,2:20:9.41:0,9,668	0/0:28,0:23:54.15:0,54,734	0/0:28,0:23:45.15:0,45,625	0/0:37,0:28:39.13:0,39,543	0/1:27,6:20:56.60:57,0,422	0/0:25,0:17:48.10:0,48,616	0/0:16,0:13:33.11:0,33,459	0/0:32,0:23:51.10:0,51,668	0/0:13,3:11:27.09:0,27,377	0/0:27,0:26:59.88:0,60,837	0/0:23,2:14:18.06:0,18,250	0/1:16,1:15:5.44:5,0,486	0/0:28,0:25:69.20:0,69,942	0/0:21,0:18:35.60:0,36,448	0/0:11,0:9:27.09:0,27,371
chr10	14563641	.	T	TA	1166.84	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.987;DP=575;FS=16.707;HRun=0;HaplotypeScore=57.5836;InbreedingCoeff=0.9183;MQ=65.96;MQ0=0;MQRankSum=1.160;QD=29.17;ReadPosRankSum=1.816;VQSLOD=2.4059;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,126,1739	0/0:3,0:3:9.01:0,9,107	0/0:10,0:9:20.85:0,21,206	0/0:5,0:4:6.01:0,6,61	0/0:23,0:23:69.21:0,69,933	1/1:2,26:28:73.88:951,74,0	1/1:1,11:12:27.56:337,28,0	0/0:39,0:39:99:0,117,1594	0/0:19,0:19:57.18:0,57,776	0/0:30,0:30:90.29:0,90,1217	0/0:23,0:23:66.21:0,66,905	0/0:9,0:9:27.09:0,27,377	0/0:15,0:15:45.15:0,45,629	0/0:20,0:20:60.20:0,60,838	0/0:16,0:16:48.15:0,48,654	0/0:20,0:20:57.19:0,57,797	0/0:24,0:24:69.22:0,69,947	0/0:23,0:23:60.18:0,60,803	0/0:27,0:27:81.27:0,81,1115	0/0:29,0:29:84.22:0,84,1065	0/0:9,0:9:27.08:0,27,360	0/0:12,0:12:35.94:0,36,461	0/0:21,0:21:60.19:0,60,819	0/0:19,0:19:57.19:0,57,790	0/0:29,0:29:87.29:0,87,1215	0/0:29,0:29:84.28:0,84,1171	0/0:17,0:17:51.16:0,51,696	0/0:22,0:22:63.21:0,63,881
chr10	14564009	.	A	ACTGT	3013.74	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-0.086;DP=671;FS=2.906;HRun=0;HaplotypeScore=114.1575;InbreedingCoeff=0.9977;MQ=71.88;MQ0=0;MQRankSum=-5.389;QD=57.96;ReadPosRankSum=2.402;VQSLOD=5.5372;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:69.22:0,69,1225	0/0:7,0:7:21.07:0,21,382	0/0:16,0:16:33.03:0,33,528	0/0:15,0:15:42.01:0,42,659	0/0:35,0:35:99:0,102,1818	1/1:3,26:29:69.24:1804,69,0	1/1:5,17:23:51.17:1331,51,0	0/0:28,0:28:84.29:0,84,1502	0/0:21,0:21:57.18:0,57,992	0/0:27,0:27:81.28:0,81,1471	0/0:27,0:27:78.26:0,78,1359	0/0:35,0:35:99:0,102,1785	0/0:16,0:16:42.13:0,42,734	0/0:20,0:20:51.11:0,51,862	0/0:23,0:23:66.21:0,66,1147	0/0:33,0:33:96.31:0,96,1689	0/0:14,0:13:39.13:0,39,709	0/0:18,0:18:45.15:0,45,819	0/0:21,0:21:54.18:0,54,946	0/0:44,0:44:99:0,123,2182	0/0:15,0:15:45.15:0,45,819	0/0:23,0:23:66.23:0,66,1200	0/0:24,0:24:69.24:0,69,1245	0/0:32,0:31:90.29:0,90,1602	0/0:21,0:21:63.22:0,63,1146	0/0:33,0:33:93.32:0,93,1680	0/0:30,0:30:87.30:0,87,1581	0/0:18,0:18:39.12:0,39,676
chr10	14564473	.	CT	C	2405.31	PASS	AB=0.769;AC=32;AF=0.571;AN=56;BaseQRankSum=-2.911;DP=448;FS=3.821;HRun=14;HaplotypeScore=69.0640;InbreedingCoeff=0.6279;MQ=65.73;MQ0=1;MQRankSum=2.988;QD=7.91;ReadPosRankSum=3.394;VQSLOD=2.9992;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:20:23.40:0,23,154	1/1:2,4:8:15.97:94,16,0	0/0:8,1:8:11.98:0,12,100	0/1:8,0:6:0.06:0,0,17	1/1:11,13:24:25.95:183,26,0	0/0:6,0:15:17.28:0,17,95	0/0:11,0:18:32.19:0,32,179	1/1:16,19:36:8.17:340,8,0	1/1:4,5:10:13.88:88,14,0	1/1:4,8:12:23.74:163,24,0	0/1:3,9:12:0.70:120,0,1	0/1:2,1:11:0.25:0,0,76	0/0:1,0:11:17.19:0,17,94	0/0:6,0:17:26.30:0,26,180	1/1:1,12:14:6.22:182,6,0	0/1:3,5:8:12.55:50,0,13	1/1:6,17:24:51.50:337,51,0	1/1:2,13:17:33.32:267,33,0	1/1:12,16:29:12.07:223,12,0	0/1:12,7:18:20.35:117,0,20	1/1:13,8:21:19.81:142,20,0	0/1:9,2:15:10.84:11,0,26	0/0:7,0:17:15.68:0,16,79	0/0:9,1:27:34.41:0,34,200	0/0:6,0:9:18.05:0,18,116	1/1:7,3:12:9.84:53,10,0	1/1:3,10:14:16.84:109,17,0	1/1:1,7:9:19.88:129,20,0
chr10	14565148	.	CGT	C	2371.40	PASS	AB=0.995;AC=28;AF=0.500;AN=56;BaseQRankSum=4.849;DP=410;FS=32.757;HRun=0;HaplotypeScore=155.3122;InbreedingCoeff=0.2983;MQ=55.79;MQ0=10;MQRankSum=-2.414;QD=8.32;ReadPosRankSum=1.489;VQSLOD=1.4412;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,3:19:44.81:400,45,0	0/1:15,0:15:40.22:59,0,40	0/0:18,0:11:19.98:0,20,214	0/0:24,0:10:22.26:0,22,161	0/1:19,0:19:55.45:55,0,66	0/0:14,0:14:35.64:0,36,237	0/0:6,0:6:14.83:0,15,105	0/0:7,0:7:14.78:0,15,99	0/0:16,0:16:18.21:0,18,230	0/1:15,0:13:3.54:4,0,188	0/1:19,1:20:48.07:89,0,48	1/1:9,0:9:18:157,18,0	1/1:3,0:2:6:51,6,0	1/1:10,1:13:35.98:349,36,0	1/1:13,0:13:17.06:89,17,0	0/0:16,0:14:23.51:0,24,248	0/1:22,0:22:26.54:27,0,139	0/1:12,0:12:27.61:28,0,63	0/1:19,0:18:0.78:1,0,171	0/1:15,0:15:43.62:44,0,91	0/0:16,0:15:29.84:0,30,229	1/1:8,0:9:26.98:241,27,0	1/1:7,0:7:17.96:152,18,0	1/1:21,2:23:53.94:474,54,0	1/1:2,1:4:12:112,12,0	0/1:24,0:24:76.01:76,0,130	0/1:23,0:22:96.67:160,0,97	0/0:8,0:8:6.94:0,7,91
chr10	14565209	.	CT	C	1690.81	PASS	AB=0.776;AC=20;AF=0.370;AN=54;BaseQRankSum=-9.311;DP=470;FS=9.602;HRun=10;HaplotypeScore=143.4378;InbreedingCoeff=0.7562;MQ=32.78;MQ0=43;MQRankSum=4.628;QD=10.06;ReadPosRankSum=2.685;VQSLOD=1.3444;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:13,21:30:11.69:244,0,12	0/0:5,0:5:5.91:0,6,45	0/0:19,0:3:8.50:0,8,67	0/0:15,0:1:3.01:0,3,32	0/0:18,0:15:14.55:0,15,92	1/1:2,11:13:32.98:282,33,0	1/1:6,9:11:16.32:221,16,0	0/0:35,0:26:46.13:0,46,296	0/1:13,1:13:4.75:5,0,118	0/0:18,0:13:29.21:0,29,190	0/0:17,0:15:40.36:0,40,312	1/1:2,6:6:8.99:78,9,0	1/1:1,5:6:12:104,12,0	1/1:4,9:12:17.44:136,17,0	0/0:18,0:16:33.81:0,34,269	0/0:11,0:8:11.87:0,12,87	0/0:24,0:21:23.97:0,24,134	0/0:19,0:16:23.43:0,23,159	0/0:35,0:32:76.91:0,77,471	0/0:18,0:16:23.93:0,24,192	0/0:10,0:8:12.05:0,12,70	1/1:3,10:13:20.89:170,21,0	1/1:8,12:19:30.25:249,30,0	1/1:6,23:22:43.40:388,43,0	1/1:0,3:3:2.80:13,3,0	0/0:15,0:12:29.71:0,30,211	0/0:21,0:18:33.28:0,33,264	./.
chr10	14565304	.	C	CGT	4767.36	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=8.653;DP=381;FS=0.429;HRun=0;HaplotypeScore=65.3473;InbreedingCoeff=0.9501;MQ=57.67;MQ0=6;MQRankSum=-3.040;QD=23.72;ReadPosRankSum=2.634;VQSLOD=5.2414;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:78.18:0,78,1043	1/1:3,0:3:9.03:105,9,0	0/0:12,0:7:18.05:0,18,246	0/0:22,0:14:29.04:0,29,370	1/1:10,0:10:18.05:209,18,0	0/0:16,0:16:45.13:0,45,640	0/0:18,0:18:48.01:0,48,614	1/1:15,0:15:35.90:353,36,0	1/1:9,0:8:2.57:189,3,0	1/1:13,1:14:42.03:479,42,0	1/1:16,0:16:30.09:346,30,0	0/0:10,0:10:30.08:0,30,420	0/0:5,0:5:15.05:0,15,221	0/0:9,0:9:27.05:0,27,339	1/1:7,0:7:18.05:208,18,0	1/1:12,0:11:23.81:278,24,0	1/1:23,0:21:27.08:310,27,0	1/1:16,2:16:30.09:390,30,0	1/1:11,1:10:29.99:286,30,0	1/1:13,0:13:18.05:207,18,0	1/1:12,1:13:30.09:369,30,0	0/0:10,0:10:30.10:0,30,441	0/0:19,0:19:45.14:0,45,638	0/0:15,0:15:36.10:0,36,508	0/0:9,0:9:27.09:0,27,397	1/1:16,0:15:39.05:447,39,0	1/1:16,1:17:42.12:485,42,0	1/1:2,1:3:9.03:105,9,0
chr10	14565305	.	G	GTGTC	10782.41	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=-9.487;DP=416;FS=0.000;HRun=0;HaplotypeScore=72.8597;InbreedingCoeff=0.9647;MQ=57.97;MQ0=6;MQRankSum=-4.263;QD=46.28;ReadPosRankSum=2.194;VQSLOD=5.0444;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:34:81.21:0,81,1434	1/1:1,3:5:12:271,12,0	0/0:12,0:7:21.05:0,21,352	0/0:21,0:15:38.33:0,38,493	1/1:2,10:12:18.06:502,18,0	0/0:16,0:16:45.14:0,45,860	0/0:18,0:18:51:0,51,839	1/1:3,14:20:44.93:572,45,0	1/1:3,7:10:5.60:565,6,0	1/1:1,13:15:41.99:981,42,0	1/1:2,14:19:30.10:835,30,0	0/0:11,0:11:30.08:0,30,561	0/0:6,0:5:15.05:0,15,299	0/0:9,0:9:27.05:0,27,431	1/1:0,7:7:18.06:502,18,0	1/1:0,12:11:23.82:669,24,0	1/1:7,20:25:26.59:828,27,0	1/1:4,13:17:29.99:707,30,0	1/1:4,11:13:39:671,39,0	1/1:3,12:17:18.06:501,18,0	1/1:2,12:14:30.05:772,30,0	0/0:10,0:10:30.10:0,30,598	0/0:19,0:19:51.13:0,51,908	0/0:15,0:15:39.12:0,39,723	0/0:10,0:10:27.09:0,27,538	1/1:3,15:17:44.66:989,45,0	1/1:3,15:18:42.14:1167,42,0	1/1:1,2:4:9.03:251,9,0
chr10	14565606	.	TCCA	T	1769.92	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.242;DP=645;FS=1.280;HRun=0;HaplotypeScore=93.3371;InbreedingCoeff=0.9979;MQ=73.55;MQ0=1;MQRankSum=-2.656;QD=40.23;ReadPosRankSum=-0.933;VQSLOD=4.6010;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,99,2282	0/0:10,0:10:30.10:0,30,690	0/0:22,0:22:22.58:0,23,1273	0/0:22,0:21:52.81:0,53,1270	0/0:21,0:21:57.20:0,57,1308	1/1:1,16:17:39.13:665,39,0	1/1:1,26:27:72.25:1227,72,0	0/0:35,0:35:99:0,105,2362	0/0:24,0:24:66.23:0,66,1520	0/0:29,0:29:81.28:0,81,1862	0/0:19,0:19:51.18:0,51,1175	0/0:16,0:16:48.16:0,48,1106	0/0:18,0:18:51.18:0,51,1176	0/0:23,0:23:69.24:0,69,1569	0/0:36,0:36:99:0,108,2423	0/0:18,0:18:54.19:0,54,1245	0/0:21,0:21:60.18:0,60,1332	0/0:13,0:13:36.12:0,36,806	0/0:19,0:19:54.19:0,54,1243	0/0:28,0:28:84.29:0,84,1914	0/0:26,0:26:75.26:0,75,1727	0/0:19,0:19:57.20:0,57,1312	0/0:28,0:28:81.28:0,81,1847	0/0:32,0:32:90.31:0,90,2075	0/0:20,0:20:60.21:0,60,1379	0/0:26,0:26:78.27:0,78,1781	0/0:31,0:31:93.32:0,93,2134	0/0:10,0:10:30.10:0,30,690
chr10	14565911	.	CA	C	13256.19	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=17.524;DP=648;FS=4.309;HRun=2;HaplotypeScore=87.9393;InbreedingCoeff=0.9999;MQ=77.59;MQ0=0;MQRankSum=-4.065;QD=36.12;ReadPosRankSum=4.006;VQSLOD=5.3931;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,114,1696	1/1:0,16:16:45.15:582,45,0	0/0:30,0:30:78.98:0,79,1137	0/0:24,0:24:69.01:0,69,876	1/1:0,27:27:81.26:1051,81,0	0/0:19,0:19:57.19:0,57,853	0/0:24,0:24:72.22:0,72,1040	1/1:3,19:22:57.17:726,57,0	1/1:1,22:23:63.20:818,63,0	1/1:0,17:17:48.14:608,48,0	1/1:1,24:25:60.19:779,60,0	0/0:13,0:13:39.12:0,39,564	0/0:18,0:18:54.18:0,54,809	0/0:24,0:24:69.23:0,69,1024	1/1:0,22:22:66.21:857,66,0	1/1:0,27:27:81.26:1052,81,0	1/1:1,41:43:99:1514,117,0	1/1:0,27:27:78.25:1005,78,0	1/1:1,13:14:39.11:490,39,0	1/1:1,28:29:81.26:1051,81,0	1/1:0,14:14:42.14:545,42,0	0/0:23,0:23:66.21:0,66,951	0/0:20,0:20:54.15:0,54,766	0/0:26,0:25:75.24:0,75,1103	0/0:22,0:22:66.22:0,66,971	1/1:0,21:21:63.20:818,63,0	1/1:0,28:28:75.24:974,75,0	1/1:0,12:12:30.10:386,30,0
chr10	14566871	.	C	CAGT	3752.72	PASS	AB=0.831;AC=14;AF=0.250;AN=56;BaseQRankSum=13.994;DP=624;FS=10.795;HRun=0;HaplotypeScore=134.8992;InbreedingCoeff=-0.2750;MQ=58.08;MQ0=4;MQRankSum=-0.754;QD=12.43;ReadPosRankSum=8.531;VQSLOD=1.5013;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:74.91:0,75,1190	0/1:2,5:7:2.36:212,0,2	0/0:23,0:15:37.21:0,37,576	0/0:25,0:22:63.16:0,63,954	0/1:21,2:23:99:302,0,146	0/0:20,0:20:29.79:0,30,381	0/0:16,0:16:47.81:0,48,383	0/0:24,0:24:59.62:0,60,351	0/0:30,0:30:80.18:0,80,653	0/1:28,3:31:99:189,0,329	0/1:14,0:14:50.51:51,0,115	0/0:17,0:17:45.15:0,45,803	0/0:22,0:22:66.23:0,66,1193	0/0:17,0:17:39.11:0,39,643	0/1:17,4:21:99:168,0,113	0/1:21,2:23:99:136,0,153	0/1:17,14:31:99:761,0,142	0/1:10,3:13:94.57:195,0,95	0/1:19,3:21:99:126,0,223	0/1:14,5:19:99:237,0,120	0/1:24,5:29:99:284,0,126	0/0:24,0:23:57.11:0,57,888	0/0:17,0:17:48.11:0,48,765	0/0:44,0:44:99:0,126,2072	0/0:17,0:17:51.13:0,51,771	0/1:19,6:25:99:354,0,143	0/1:25,12:37:99:547,0,230	0/1:6,1:7:20.25:191,0,20
chr10	14566872	.	C	CA	947.28	PASS	AB=0.813;AC=14;AF=0.250;AN=56;BaseQRankSum=12.064;DP=623;FS=8.580;HRun=0;HaplotypeScore=118.7087;InbreedingCoeff=-0.1603;MQ=57.92;MQ0=4;MQRankSum=1.403;QD=3.28;ReadPosRankSum=8.523;VQSLOD=1.6875;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:69.66:0,70,933	0/1:2,5:7:7.16:80,0,7	0/0:22,0:14:35.95:0,36,505	0/0:25,0:22:65.84:0,66,830	0/1:22,2:24:63.74:64,0,133	0/0:20,0:20:51.47:0,51,267	0/0:16,0:16:45.47:0,45,235	0/0:26,0:26:62.46:0,62,284	0/0:30,0:30:79.89:0,80,411	0/1:28,3:31:70.16:70,0,199	0/0:13,0:13:6.31:0,6,118	0/0:17,0:17:45.15:0,45,628	0/0:22,0:22:66.22:0,66,920	0/0:17,0:17:39.09:0,39,522	0/1:17,4:21:58.21:58,0,115	0/1:21,2:23:32.48:32,0,146	0/1:17,14:31:99:240,0,106	0/1:10,3:13:57.93:58,0,68	0/1:21,3:23:20.77:21,0,152	0/1:14,5:19:81.25:83,0,81	0/1:24,5:29:36.78:37,0,129	0/0:24,0:23:56.20:0,56,742	0/0:18,0:18:46.88:0,47,608	0/0:42,0:42:99:0,114,1570	0/0:17,0:17:51.01:0,51,641	0/1:17,6:23:97.68:98,0,113	0/1:25,12:37:99:174,0,197	1/1:6,1:7:5.27:91,5,0
chr10	14567022	.	C	CTT	3408.19	PASS	AB=1.000;AC=38;AF=0.704;AN=54;BaseQRankSum=-3.702;DP=343;FS=3.733;HRun=10;HaplotypeScore=65.3858;InbreedingCoeff=0.4714;MQ=64.76;MQ0=7;MQRankSum=-2.796;QD=11.79;ReadPosRankSum=2.310;VQSLOD=1.1840;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,11:25:50.95:591,51,0	./.	0/0:28,0:9:13.09:0,13,96	0/1:31,0:11:11.17:15,0,11	1/1:10,0:10:0.47:1,0,0	1/1:9,0:8:0.47:1,0,0	0/1:10,0:10:0:0,0,0	0/0:14,0:14:2.01:0,2,7	1/1:7,0:7:0.47:1,0,0	0/1:7,0:7:0:0,0,0	0/0:9,0:9:0.45:0,0,1	1/1:8,7:16:29.54:367,30,0	1/1:6,6:12:36.07:507,36,0	1/1:5,5:10:21.03:287,21,0	0/1:10,0:10:0:0,0,0	0/1:8,0:8:0:0,0,0	0/1:10,0:10:0:0,0,0	0/1:7,0:7:0:0,0,0	0/1:6,0:6:0:0,0,0	1/1:10,0:10:0.47:1,0,0	0/1:11,0:11:0:0,0,0	1/1:8,6:13:27.08:369,27,0	1/1:8,9:19:54:633,54,0	1/1:6,7:10:15:181,15,0	1/1:4,9:16:38.05:451,38,0	0/1:5,0:5:0:0,0,0	1/1:16,0:15:0.47:1,0,0	1/1:7,0:7:0.94:2,1,0
chr10	14567031	.	TTG	T	1062.36	PASS	AB=0.939;AC=15;AF=0.536;AN=28;BaseQRankSum=-2.052;DP=193;FS=5.659;HRun=0;HaplotypeScore=85.9031;InbreedingCoeff=-0.2174;MQ=70.51;MQ0=12;MQRankSum=-0.937;QD=6.94;ReadPosRankSum=2.126;VQSLOD=2.4683;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:22:29.81:241,0,30	./.	0/0:31,0:8:0.99:0,1,112	0/1:32,0:8:1.12:10,0,1	./.	./.	./.	0/0:1,0:1:3.01:0,3,40	./.	1/1:2,0:1:0.89:2,1,0	0/0:2,0:1:0.47:0,0,1	0/1:10,3:13:26.92:90,0,27	1/1:7,5:12:34.65:218,35,0	0/1:9,0:9:41.97:53,0,42	./.	./.	./.	./.	./.	1/1:1,0:1:0.47:1,0,0	./.	1/1:10,2:11:6.40:183,6,0	0/1:18,3:20:24.42:243,0,24	0/1:13,0:10:18.46:18,0,80	0/1:14,2:16:55.95:102,0,56	./.	./.	./.
chr10	14567041	.	GT	G	1024.79	PASS	AB=1.000;AC=19;AF=0.792;AN=24;BaseQRankSum=0.577;DP=220;FS=3.779;HRun=18;HaplotypeScore=83.1518;InbreedingCoeff=0.5772;MQ=57.80;MQ0=27;MQRankSum=-1.363;QD=6.61;ReadPosRankSum=0.901;VQSLOD=2.6571;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:13,10:22:46.42:247,46,0	./.	0/0:39,0:5:0:0,0,0	0/1:39,0:9:0:0,0,0	./.	./.	./.	1/1:1,0:1:2.84:14,3,0	./.	0/0:5,0:2:2.84:0,3,14	./.	1/1:6,7:13:21.49:111,21,0	1/1:7,5:12:13.17:76,13,0	1/1:1,7:8:20.13:108,20,0	./.	./.	./.	./.	./.	./.	./.	1/1:3,6:7:14.32:77,14,0	1/1:11,8:18:25.73:138,26,0	1/1:6,9:12:28.74:154,29,0	1/1:5,11:16:34.49:184,34,0	./.	./.	./.
chr10	14567052	.	T	TG	67.05	PASS	AB=0.928;AC=13;AF=0.542;AN=24;BaseQRankSum=-2.214;DP=216;FS=0.000;HRun=0;HaplotypeScore=84.2590;InbreedingCoeff=0.1396;MQ=43.09;MQ0=33;MQRankSum=-1.895;QD=0.61;ReadPosRankSum=2.868;VQSLOD=1.1758;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:22,4:24:23.75:29,0,24	./.	0/0:35,0:2:5.73:0,6,34	0/0:35,0:5:4.74:0,5,24	./.	./.	./.	0/0:2,0:1:3:0,3,27	./.	1/1:6,0:2:2.68:11,3,0	./.	0/1:10,0:10:6.30:6,0,10	0/0:11,0:11:12.37:0,12,56	1/1:12,0:12:3.45:33,3,0	./.	./.	./.	./.	./.	./.	./.	1/1:9,0:7:2.56:8,3,0	0/1:15,1:15:23.78:24,0,28	1/1:13,2:12:3.94:17,4,0	1/1:15,0:15:3.27:41,3,0	./.	./.	./.
chr10	14567262	.	AT	A	612.82	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=1.498;DP=483;FS=3.634;HRun=7;HaplotypeScore=81.2028;InbreedingCoeff=0.8189;MQ=63.38;MQ0=0;MQRankSum=-0.899;QD=19.15;ReadPosRankSum=-0.384;VQSLOD=3.2474;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,99,1232	0/0:7,0:7:21.07:0,21,264	0/0:10,0:10:4.26:0,4,174	0/0:12,0:10:16.86:0,17,185	0/0:24,0:24:66.21:0,66,829	1/1:3,19:22:48.11:489,48,0	1/1:2,8:10:24.05:244,24,0	0/0:38,0:38:96.28:0,96,1170	0/0:12,0:12:33.11:0,33,415	0/0:16,0:16:45.14:0,45,566	0/0:19,0:19:48.15:0,48,603	0/0:15,0:15:42.13:0,42,527	0/0:12,0:12:33.09:0,33,401	0/0:7,0:7:21.07:0,21,264	0/0:13,0:13:33.11:0,33,415	0/0:12,0:12:33.11:0,33,414	0/0:25,0:24:69.22:0,69,867	0/0:22,0:22:60.19:0,60,748	0/0:15,0:15:45.13:0,45,554	0/0:36,0:36:96.31:0,96,1207	0/0:11,0:11:24.08:0,24,302	0/0:13,0:13:39.12:0,39,489	0/0:12,0:12:36.12:0,36,452	0/0:10,1:11:2.45:0,2,329	0/0:18,0:18:42.13:0,42,528	0/0:28,0:28:75.24:0,75,942	0/0:26,0:26:78.25:0,78,981	0/0:3,0:3:9.03:0,9,113
chr10	14568294	.	AG	A	1105.57	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.294;DP=665;FS=0.659;HRun=3;HaplotypeScore=68.4280;InbreedingCoeff=0.9911;MQ=60.87;MQ0=1;MQRankSum=0.415;QD=26.97;ReadPosRankSum=0.347;VQSLOD=2.7832;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,138,1946	0/0:6,0:6:18.06:0,18,259	0/0:19,0:9:24.04:0,24,308	0/0:18,0:11:24.07:0,24,314	0/0:16,0:16:48.16:0,48,690	1/1:0,12:12:27.08:335,27,0	1/1:3,26:29:72.23:892,72,0	0/0:24,0:23:69.21:0,69,945	0/0:25,0:25:75.25:0,75,1079	0/0:28,0:28:78.26:0,78,1122	0/0:15,0:15:45.14:0,45,630	0/0:23,0:23:69.22:0,69,973	0/0:26,0:26:72.22:0,72,995	0/0:29,0:29:84.27:0,84,1186	0/0:35,0:35:99:0,105,1493	0/0:27,0:27:78.26:0,78,1123	0/0:27,0:27:75.24:0,75,1057	0/0:27,0:27:78.26:0,78,1120	0/0:26,0:24:72.24:0,72,1037	0/0:23,0:23:63.21:0,63,906	0/0:49,0:49:99:0,141,1994	0/0:22,0:22:63.21:0,63,907	0/0:15,0:15:45.15:0,45,629	0/0:24,0:24:69.15:0,69,947	0/0:14,0:14:39.13:0,39,560	0/0:23,0:23:66.21:0,66,933	0/0:29,0:28:78.26:0,78,1123	0/0:7,0:7:21.07:0,21,302
chr10	14568468	.	A	AGT	101.91	PASS	AB=0.912;AC=6;AF=0.130;AN=46;BaseQRankSum=-0.103;DP=599;FS=6.706;HRun=0;HaplotypeScore=119.1499;InbreedingCoeff=-0.1656;MQ=63.03;MQ0=26;MQRankSum=-0.286;QD=0.84;ReadPosRankSum=-2.253;VQSLOD=1.1246;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:23:14.63:0,15,94	0/0:7,0:6:2.88:0,3,23	./.	./.	./.	0/1:12,5:19:13.57:38,0,14	0/1:17,9:26:11.17:80,0,11	0/0:25,0:21:0.87:0,1,13	0/0:22,0:22:14.77:0,15,103	0/0:23,0:22:10.45:0,10,73	./.	0/0:21,0:21:14.42:0,14,80	0/0:18,0:17:5.58:0,6,33	0/0:21,0:21:5.68:0,6,28	0/0:29,0:29:12.57:0,13,99	0/1:20,0:20:30.69:40,0,31	0/0:31,0:31:11.61:0,12,67	0/1:21,0:21:28.17:33,0,28	0/0:18,0:17:5.80:0,6,33	0/1:10,0:10:13.60:19,0,14	0/0:59,0:57:7.66:0,8,40	0/0:10,0:11:5.09:0,5,48	0/0:12,0:10:2.84:0,3,14	0/0:24,0:24:20.01:0,20,104	./.	0/1:25,0:24:0.13:0,0,21	0/0:10,0:11:14.08:0,14,79	0/0:6,0:6:2.96:0,3,19
chr10	14568508	.	TGTGTGC	T	2267.88	PASS	AB=0.993;AC=29;AF=0.537;AN=54;BaseQRankSum=6.792;DP=615;FS=1.781;HRun=0;HaplotypeScore=151.0794;InbreedingCoeff=-0.2198;MQ=54.26;MQ0=27;MQRankSum=1.082;QD=4.34;ReadPosRankSum=5.027;VQSLOD=2.3999;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:25:15.39:419,0,15	0/0:8,0:7:2.80:0,3,13	1/1:10,0:4:0.72:7,1,0	0/0:7,0:4:5.49:0,5,35	0/1:9,0:8:0.05:0,0,0	0/0:17,0:17:17.07:0,17,305	0/0:31,0:31:10.33:0,10,467	0/1:37,0:30:99:241,0,156	0/1:21,0:21:55.57:56,0,118	1/1:32,0:31:11.56:377,12,0	./.	0/1:23,0:23:34.74:38,0,35	0/1:23,2:25:1.99:2,0,64	1/1:25,1:25:5.39:28,5,0	0/1:25,0:25:9.03:9,0,187	0/1:23,0:23:92.42:92,0,185	0/1:27,0:27:33.95:90,0,34	0/1:22,0:22:99:103,0,114	1/1:12,0:9:11.82:87,12,0	0/1:17,0:17:34.16:123,0,34	1/1:66,0:61:4.41:72,4,0	0/1:15,0:14:18.32:182,0,18	1/1:15,0:13:3.31:15,3,0	0/1:36,1:36:27.20:67,0,27	0/0:21,0:20:2.99:0,3,23	0/1:30,0:27:18.32:301,0,18	0/1:20,0:17:61.09:81,0,61	1/1:5,0:4:3:29,3,0
chr10	14568510	.	TGTGC	T	3392.73	PASS	AB=0.897;AC=33;AF=0.635;AN=52;BaseQRankSum=5.223;DP=609;FS=1.246;HRun=0;HaplotypeScore=138.8298;InbreedingCoeff=0.0403;MQ=55.73;MQ0=23;MQRankSum=0.635;QD=6.46;ReadPosRankSum=5.275;VQSLOD=2.5295;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:25,1:26:39.01:493,39,0	0/0:8,0:7:2.97:0,3,20	0/0:9,0:5:2.75:0,3,8	0/0:7,0:4:5.49:0,5,35	0/1:10,0:9:0:0,0,0	0/1:19,0:19:0.81:1,0,160	0/0:32,0:32:33.97:0,34,425	0/1:35,0:29:24.95:248,0,25	0/1:19,0:21:33.08:52,0,33	1/1:30,0:30:44.51:408,45,0	./.	0/1:4,19:23:9.91:216,0,10	1/1:9,17:26:2.40:58,2,0	1/1:4,22:25:5.99:118,6,0	0/1:22,0:24:72.75:85,0,73	0/1:22,0:22:57.77:135,0,58	0/1:26,0:27:9.88:57,0,10	0/1:21,0:21:36.92:125,0,37	1/1:6,0:9:11.25:77,11,0	1/1:17,0:17:4.12:134,4,0	1/1:65,0:60:8.40:70,8,0	1/1:14,1:15:20.70:318,21,0	1/1:3,12:13:3.48:60,3,0	0/1:9,28:36:2.42:335,0,2	./.	1/1:29,0:26:25.91:306,26,0	0/1:18,0:16:5.10:88,0,5	1/1:5,0:4:2.60:10,3,0
chr10	14568512	.	TGCGCGC	T	6876.77	PASS	AB=0.842;AC=29;AF=0.580;AN=50;BaseQRankSum=1.793;DP=599;FS=22.608;HRun=0;HaplotypeScore=138.0274;InbreedingCoeff=0.6625;MQ=56.88;MQ0=21;MQRankSum=-2.652;QD=19.93;ReadPosRankSum=-0.087;VQSLOD=3.0261;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:30.90:0,31,433	./.	0/1:9,0:5:5.13:5,0,29	0/1:9,0:6:5.94:6,0,83	0/1:1,8:9:0.05:0,0,0	0/0:19,0:19:12.04:0,12,310	0/0:32,0:32:52.06:0,52,1162	1/1:16,17:27:48.16:967,48,0	1/1:6,14:20:9.03:175,9,0	1/1:5,26:30:81.21:1566,81,0	./.	0/0:23,0:23:8.18:0,8,36	0/0:24,0:24:2.43:0,2,14	0/0:26,0:25:6.06:0,6,27	1/1:6,1:21:10.70:111,11,0	1/1:13,4:22:36.56:656,37,0	1/1:6,20:26:12.50:244,12,0	1/1:16,3:20:38.96:633,39,0	1/1:11,1:9:21.03:328,21,0	1/1:13,2:17:27.09:533,27,0	1/1:18,46:59:5.13:30,5,0	0/0:15,0:15:5.09:0,5,217	0/0:15,0:13:2.64:0,3,10	0/0:37,0:36:16.39:0,16,85	./.	1/1:7,22:26:69.21:1365,69,0	1/1:8,9:15:14.52:192,15,0	1/1:1,4:4:3.01:67,3,0
chr10	14569101	.	A	ACCATAG	4409.46	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-2.660;DP=613;FS=7.085;HRun=0;HaplotypeScore=189.8201;InbreedingCoeff=0.9922;MQ=69.95;MQ0=0;MQRankSum=-9.831;QD=89.99;ReadPosRankSum=-0.641;VQSLOD=5.7811;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:34:99:0,108,2598	0/0:6,0:6:18.06:0,18,454	0/0:11,0:11:33.01:0,33,611	0/0:11,0:11:29.50:0,29,590	0/0:17,0:17:47.73:0,48,1146	1/1:5,16:22:57.20:2071,57,0	1/1:9,16:27:66.18:2338,66,0	0/0:19,0:19:51.13:0,51,1242	0/0:19,0:19:54.19:0,54,1382	0/0:20,0:20:54.18:0,54,1345	0/0:9,0:9:24.08:0,24,615	0/0:29,0:29:87.30:0,87,2196	0/0:25,0:25:72.25:0,72,1790	0/0:21,0:21:60.21:0,60,1483	0/0:30,0:30:90.31:0,90,2252	0/0:20,0:20:57.20:0,57,1460	0/0:37,0:37:99:0,105,2562	0/0:20,0:20:57.20:0,57,1460	0/0:29,0:29:81.27:0,81,1923	0/0:17,0:17:48.15:0,48,1129	0/0:61,0:61:99:0,143,3489	0/0:17,0:17:48.16:0,48,1198	0/0:12,0:12:33.09:0,33,709	0/0:35,0:34:99:0,102,2560	0/0:16,0:16:48.16:0,48,1210	0/0:17,0:17:51.17:0,51,1241	0/0:23,0:23:66.20:0,66,1506	0/0:7,0:7:21.07:0,21,531
chr10	14569208	.	ACCCATAAAACACCTGGGATACCTGGTACTTCTGAGACAC	A	14413.50	PASS	AC=28;AF=0.538;AN=52;BaseQRankSum=11.538;DP=463;FS=0.546;HRun=0;HaplotypeScore=449.8473;InbreedingCoeff=0.8586;MQ=77.74;MQ0=0;MQRankSum=-9.182;QD=86.31;ReadPosRankSum=4.076;VQSLOD=2.1945;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,151,21107	1/1:3,3:6:9.03:913,9,0	0/0:16,0:16:45.15:0,45,2601	0/0:12,0:12:36.12:0,36,2842	1/1:1,4:5:3.01:275,3,0	0/0:15,0:15:45.15:0,45,6689	0/0:30,0:30:87.28:0,87,10092	./.	1/1:8,8:16:18.06:1827,18,0	1/1:12,5:17:15.05:1263,15,0	1/1:0,3:3:6.02:459,6,0	0/0:22,0:22:66.23:0,66,9555	0/0:20,0:20:60.21:0,60,8803	0/0:31,0:31:90.30:0,90,12960	1/1:8,11:19:27.09:2740,27,0	1/1:9,6:15:15.05:1522,15,0	1/1:10,6:15:6.02:603,6,0	./.	1/1:5,4:9:11.99:440,12,0	1/1:3,6:9:8.56:887,9,0	1/1:21,2:23:3.01:112,3,0	0/0:19,0:19:54.19:0,54,7134	0/0:21,0:21:63.22:0,63,8550	0/0:26,0:26:75.26:0,75,10439	0/0:21,0:21:63.22:0,63,9947	1/1:7,7:14:21.04:1849,21,0	1/1:6,4:10:12.04:1218,12,0	1/1:4,1:5:3.01:304,3,0
chr10	14570155	.	T	TG	7879.89	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=15.150;DP=526;FS=2.424;HRun=3;HaplotypeScore=116.3931;InbreedingCoeff=0.9750;MQ=90.81;MQ0=0;MQRankSum=-16.538;QD=34.26;ReadPosRankSum=1.415;VQSLOD=4.4353;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,105,1235	1/1:0,6:6:18.06:252,18,0	0/0:26,0:26:66.17:0,66,770	0/0:26,0:26:69.12:0,69,808	1/1:3,14:17:27.91:329,28,0	0/0:22,0:21:63.18:0,63,744	0/0:32,0:32:78.22:0,78,925	1/1:7,25:32:79.03:1101,79,0	1/1:1,16:17:48.16:670,48,0	1/1:6,23:28:72.24:992,72,0	1/1:1,4:5:9:106,9,0	0/0:18,0:18:51.14:0,51,600	0/0:21,0:21:63.19:0,63,755	0/0:20,0:20:60.17:0,60,708	1/1:0,16:16:48.16:670,48,0	1/1:1,9:10:27.09:377,27,0	1/1:5,17:22:54.11:712,54,0	1/1:1,9:9:24.08:336,24,0	1/1:1,14:14:39.13:545,39,0	1/1:0,9:9:24.08:317,24,0	1/1:3,9:12:23.73:335,24,0	0/0:34,0:34:99:0,102,1213	0/0:20,0:20:60.18:0,60,718	0/0:27,0:27:72.22:0,72,861	0/0:12,0:12:36.11:0,36,431	1/1:2,10:10:30.09:404,30,0	1/1:2,14:16:48.14:651,48,0	1/1:0,2:2:6.02:84,6,0
chr10	14570163	.	T	TCAGAAAGCCTGGAC	25448.39	PASS	AB=0.944;AC=31;AF=0.554;AN=56;BaseQRankSum=17.333;DP=507;FS=5.313;HRun=0;HaplotypeScore=283.4488;InbreedingCoeff=0.8871;MQ=89.93;MQ0=0;MQRankSum=-17.154;QD=119.48;ReadPosRankSum=1.831;VQSLOD=3.8855;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,123,4162	1/1:5,1:6:18.06:691,18,0	0/0:23,0:23:69.22:0,69,1899	0/0:25,0:25:66.19:0,66,2171	1/1:9,6:15:32.90:1540,33,0	0/0:23,0:22:65.83:0,66,2560	0/0:30,0:30:90.29:0,90,3371	1/1:29,0:29:56.34:2924,56,0	1/1:12,3:15:36.12:1998,36,0	1/1:25,2:26:60.48:3381,60,0	1/1:4,0:4:9.03:538,9,0	0/0:16,0:16:48.16:0,48,1963	0/0:21,0:21:63.20:0,63,2459	0/0:20,0:20:57.18:0,57,2147	1/1:14,1:15:42.14:1762,42,0	1/1:7,2:9:27.09:1698,27,0	1/1:15,2:17:45.15:2219,45,0	1/1:12,0:11:3.17:1256,3,0	0/1:16,1:16:9.09:1875,0,9	1/1:7,2:9:24.08:1311,24,0	1/1:9,0:9:21.07:778,21,0	0/0:33,0:33:99:0,99,4033	0/0:24,0:24:66.21:0,66,2307	0/0:24,0:24:66.23:0,66,2364	0/0:13,0:13:39.11:0,39,1376	1/1:10,1:9:18.96:1012,19,0	1/1:15,1:16:41.24:2099,41,0	1/1:2,0:2:6.02:367,6,0
chr10	14570164	.	CA	C	5988.04	PASS	AB=0.611;AC=31;AF=0.554;AN=56;BaseQRankSum=15.584;DP=514;FS=5.998;HRun=2;HaplotypeScore=115.7534;InbreedingCoeff=0.9116;MQ=90.28;MQ0=0;MQRankSum=-17.521;QD=27.59;ReadPosRankSum=2.948;VQSLOD=4.3216;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,126,1845	1/1:2,4:6:18.01:209,18,0	0/0:24,0:24:69.22:0,69,944	0/0:25,0:25:66.13:0,66,882	1/1:7,7:14:26.26:225,26,0	0/0:23,0:22:66.22:0,66,989	0/0:30,0:30:90.29:0,90,1328	1/1:5,25:30:54.90:1019,55,0	1/1:6,9:15:35.99:409,36,0	1/1:7,21:27:40.93:724,41,0	1/1:1,4:5:6.02:73,6,0	0/0:16,0:16:48.16:0,48,717	0/0:21,0:21:63.21:0,63,944	0/0:20,0:20:57.19:0,57,853	1/1:1,13:14:42.09:513,42,0	1/1:3,7:10:16.95:299,17,0	1/1:4,13:17:45.06:528,45,0	1/1:4,7:11:6.04:287,6,0	1/1:6,12:17:12.98:453,13,0	1/1:3,7:10:23.44:228,23,0	1/1:3,6:9:21.06:250,21,0	0/0:34,0:34:99:0,102,1507	0/0:23,0:23:69.23:0,69,1031	0/0:23,0:23:66.22:0,66,988	0/0:13,0:13:39.13:0,39,585	0/1:4,7:9:0.48:215,0,0	1/1:4,12:16:33.07:479,33,0	1/1:1,2:3:6.02:78,6,0
chr10	14570167	.	GA	G	793.92	PASS	AB=0.863;AC=29;AF=0.518;AN=56;BaseQRankSum=10.963;DP=521;FS=1.851;HRun=3;HaplotypeScore=131.8688;InbreedingCoeff=0.6207;MQ=91.44;MQ0=0;MQRankSum=-7.671;QD=3.68;ReadPosRankSum=1.830;VQSLOD=0.5014;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,141,1980	1/1:5,0:5:4.44:14,4,0	0/0:25,0:25:75.20:0,75,994	0/0:26,0:26:69.20:0,69,915	1/1:14,0:14:14.34:109,14,0	0/0:23,0:22:66.22:0,66,950	0/0:31,0:31:93.29:0,93,1301	0/1:27,3:30:36.36:76,0,36	1/1:12,4:16:16.50:54,16,0	0/1:23,3:25:4.75:113,0,5	1/1:4,2:6:4.56:41,5,0	0/0:16,0:16:45.15:0,45,637	0/0:22,0:22:66.20:0,66,931	0/0:19,0:19:57.18:0,57,803	1/1:14,0:14:10.43:29,10,0	1/1:10,0:10:16.20:79,16,0	1/1:15,2:17:8.91:31,9,0	1/1:7,4:11:0.82:66,1,0	0/1:13,5:18:8.42:162,0,8	1/1:9,2:11:2.30:9,2,0	1/1:7,2:9:2.30:36,2,0	0/0:35,0:35:99:0,102,1468	0/0:23,0:23:66.22:0,66,950	0/0:23,0:23:63.19:0,63,872	0/0:14,0:14:42.13:0,42,588	1/1:8,3:9:7.90:115,8,0	1/1:13,2:15:5.34:51,5,0	1/1:3,0:3:0.94:2,1,0
chr10	14570168	.	A	AAAGGTTGTTCTAG	40170.69	PASS	AB=0.961;AC=25;AF=0.446;AN=56;BaseQRankSum=15.948;DP=674;FS=11.479;HRun=0;HaplotypeScore=414.0458;InbreedingCoeff=0.4748;MQ=82.73;MQ0=0;MQRankSum=-17.129;QD=109.46;ReadPosRankSum=4.110;VQSLOD=4.4039;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,138,4534	0/1:9,1:10:29.53:1190,0,30	0/0:26,0:26:57.20:0,57,2030	0/0:27,0:27:69.24:0,69,2255	1/1:21,6:27:63.07:3329,63,0	0/0:23,0:22:66.21:0,66,2495	0/0:31,0:31:90.26:0,90,3223	0/1:43,0:42:99:2821,0,203	1/1:28,3:31:28.25:3815,28,0	1/1:42,2:43:12.88:5264,13,0	1/1:13,0:13:33.11:1635,33,0	0/0:16,0:16:45.15:0,45,1787	0/0:22,0:22:66.21:0,66,2454	0/0:19,0:19:54.19:0,54,2086	0/1:19,1:20:99:2106,0,129	1/1:16,2:18:54.17:2893,54,0	0/1:26,2:28:33.16:2710,0,33	0/1:16,0:16:11.37:1394,0,11	0/1:26,1:26:5.57:3100,0,6	1/1:13,2:15:3.53:1088,4,0	1/1:17,0:17:38.34:1800,38,0	0/0:35,0:35:99:0,102,3858	0/0:23,0:23:66.23:0,66,2403	0/0:23,0:23:57.20:0,57,2105	0/0:14,0:14:42.13:0,42,1420	1/1:24,1:23:11.22:3327,11,0	0/1:28,1:29:50.44:3280,0,50	1/1:4,0:4:9.02:419,9,0
chr10	14570376	.	TC	T	15236.81	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=14.085;DP=755;FS=3.049;HRun=2;HaplotypeScore=92.3254;InbreedingCoeff=0.9983;MQ=84.27;MQ0=0;MQRankSum=-5.900;QD=35.85;ReadPosRankSum=0.968;VQSLOD=5.1975;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,144,2104	1/1:1,14:15:36.12:459,36,0	0/0:33,0:33:77.48:0,77,1185	0/0:18,0:18:16.46:0,16,514	1/1:0,14:14:36.12:462,36,0	0/0:30,0:30:87.29:0,87,1304	0/0:23,0:23:69.22:0,69,1009	1/1:0,16:16:45.15:584,45,0	1/1:1,36:37:99:1398,108,0	1/1:0,34:34:99:1284,99,0	1/1:0,17:17:48.16:623,48,0	0/0:25,0:25:75.22:0,75,1082	0/0:28,0:28:81.26:0,81,1191	0/0:28,0:28:84.26:0,84,1217	1/1:1,28:29:81.26:1050,81,0	1/1:0,26:26:72.23:934,72,0	1/1:0,38:38:99:1398,108,0	1/1:0,29:29:78.25:1013,78,0	1/1:2,28:30:83.84:1043,84,0	1/1:0,17:17:48.15:607,48,0	1/1:0,58:58:99:2026,157,0	0/0:15,0:15:43.03:0,43,631	0/0:15,0:15:42.14:0,42,629	0/0:42,0:42:99:0,126,1843	0/0:24,0:24:72.24:0,72,1075	1/1:1,25:26:75.23:959,75,0	1/1:0,28:28:75.20:967,75,0	1/1:0,11:11:33.11:428,33,0
chr10	14570378	.	CA	C	5511.90	PASS	AB=1.000;AC=31;AF=0.554;AN=56;BaseQRankSum=20.582;DP=753;FS=4.880;HRun=1;HaplotypeScore=125.2650;InbreedingCoeff=0.8996;MQ=81.18;MQ0=0;MQRankSum=-4.717;QD=12.61;ReadPosRankSum=1.748;VQSLOD=3.8143;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,147,2215	1/1:15,1:16:8.76:179,9,0	0/0:29,0:29:80.24:0,80,1248	0/0:15,0:15:21.34:0,21,505	1/1:14,0:14:34.46:182,34,0	0/0:29,0:29:87.30:0,87,1360	0/0:22,0:22:66.19:0,66,987	0/1:18,0:18:9.01:131,0,9	1/1:36,1:37:99:602,104,0	1/1:34,0:34:89.49:409,89,0	1/1:17,0:17:45.80:241,46,0	0/0:24,0:24:72.25:0,72,1122	0/0:26,0:26:78.25:0,78,1195	0/0:27,0:27:81.26:0,81,1241	1/1:29,1:30:55.32:389,55,0	1/1:26,0:26:69.19:382,69,0	1/1:38,0:38:99:523,103,0	1/1:30,0:30:57.18:359,57,0	1/1:29,1:30:36.56:301,37,0	1/1:21,0:21:2.14:201,2,0	1/1:60,0:60:99:724,129,0	0/0:15,0:15:45.14:0,45,681	0/0:14,0:14:42.14:0,42,656	0/0:42,0:42:99:0,126,1918	0/0:24,0:24:72.23:0,72,1100	1/1:27,0:27:40.20:286,40,0	1/1:28,0:28:72.54:434,73,0	1/1:11,0:11:31.68:170,32,0
chr10	14570788	.	CCGATGATGATGATGATGATGA	C	11875.71	PASS	AB=1.000;AC=33;AF=0.589;AN=56;BaseQRankSum=8.055;DP=535;FS=7.199;HRun=0;HaplotypeScore=256.0191;InbreedingCoeff=0.8147;MQ=74.16;MQ0=6;MQRankSum=-2.461;QD=38.31;ReadPosRankSum=1.483;VQSLOD=2.7233;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:77.89:0,78,2506	1/1:0,14:14:21.07:1253,21,0	0/0:26,0:22:62.76:0,63,549	0/0:20,0:12:32.66:0,33,258	1/1:0,22:22:21.03:752,21,0	0/1:23,0:23:99:348,0,307	0/0:20,0:20:2.69:0,3,283	1/1:23,0:23:69.05:663,69,0	1/1:0,19:19:21.07:1253,21,0	1/1:1,30:31:83.91:1579,84,0	1/1:0,10:10:9.03:430,9,0	0/0:14,0:14:29.97:0,30,896	0/0:18,0:19:44.98:0,45,1962	0/0:10,0:10:26.89:0,27,639	1/1:0,22:22:12.04:716,12,0	1/1:0,18:18:14.76:895,15,0	1/1:0,10:10:3.01:179,3,0	1/1:0,15:15:3.01:180,3,0	1/1:0,20:20:59.99:740,60,0	1/1:0,19:19:15.05:860,15,0	1/1:21,0:21:41.97:397,42,0	0/0:15,0:15:32.92:0,33,719	0/0:14,0:13:32.95:0,33,1167	0/0:33,0:33:65.26:0,65,3243	0/0:24,0:24:68.87:0,69,2944	1/1:0,20:20:47.91:552,48,0	1/1:0,18:18:12.04:718,12,0	1/1:0,5:5:6.02:359,6,0
chr10	14570789	.	CGAT	C	2352.02	PASS	AC=46;AF=1.000;AN=46;DP=528;FS=0.000;HRun=0;HaplotypeScore=150.4064;InbreedingCoeff=-0.0577;MQ=73.51;MQ0=6;QD=5.60;VQSLOD=2.6578;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:19,10:29:18.06:228,18,0	1/1:14,0:14:20.83:146,21,0	./.	./.	1/1:22,0:22:5.95:42,6,0	1/1:20,0:23:8.32:50,8,0	./.	./.	1/1:19,0:19:20.83:146,21,0	1/1:31,0:31:14.88:104,15,0	1/1:10,0:10:5.93:40,6,0	1/1:7,0:14:8.93:63,9,0	1/1:9,9:18:21.07:266,21,0	1/1:6,2:8:3.01:38,3,0	1/1:22,0:22:11.89:83,12,0	1/1:18,0:18:14.88:104,15,0	1/1:10,0:10:2.98:21,3,0	1/1:16,0:16:2.98:21,3,0	1/1:20,0:20:2.98:21,3,0	1/1:19,0:19:11.90:83,12,0	./.	1/1:9,0:14:5.95:42,6,0	1/1:8,5:12:12.04:152,12,0	1/1:15,18:33:30.57:381,31,0	1/1:16,7:24:21.03:249,21,0	1/1:20,0:20:2.98:21,3,0	1/1:18,0:18:11.67:83,12,0	1/1:5,0:5:5.95:42,6,0
chr10	14571141	.	T	TCTC	25324.18	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=1.899;DP=725;FS=0.614;HRun=0;HaplotypeScore=136.6572;InbreedingCoeff=0.9995;MQ=78.92;MQ0=0;MQRankSum=-6.239;QD=52.43;ReadPosRankSum=1.681;VQSLOD=6.9208;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,120,1863	1/1:0,10:11:30.05:629,30,0	0/0:22,0:22:63.18:0,63,950	0/0:25,0:25:68.98:0,69,983	1/1:1,19:21:38.69:821,39,0	1/1:2,17:20:42.14:951,42,0	1/1:2,23:25:63.17:1377,63,0	1/1:3,22:25:72.25:1591,72,0	1/1:5,28:33:87.30:1955,87,0	1/1:2,21:26:69.17:1410,69,0	1/1:0,13:13:35.88:603,36,0	0/0:25,0:25:72.23:0,72,1169	0/0:24,0:24:72.23:0,72,1169	0/0:30,0:30:84.24:0,84,1369	1/1:3,32:36:93.25:2042,93,0	1/1:2,20:21:48.16:1087,48,0	1/1:4,46:51:99:2705,120,0	1/1:2,21:23:54.19:1223,54,0	1/1:4,15:20:54.07:975,54,0	1/1:3,12:15:23.88:334,24,0	1/1:7,62:71:99:3128,155,0	0/0:12,0:12:33.06:0,33,478	0/0:11,0:11:33.11:0,33,546	0/0:24,0:24:72.22:0,72,1150	0/0:26,0:26:75.24:0,75,1219	1/1:1,29:31:87.26:1879,87,0	1/1:2,25:27:81.28:1802,81,0	1/1:0,13:13:36.12:814,36,0
chr10	14571746	.	GTC	G	972.28	PASS	AB=1.000;AC=28;AF=0.500;AN=56;BaseQRankSum=2.880;DP=421;FS=6.996;HRun=0;HaplotypeScore=160.6278;InbreedingCoeff=0.4124;MQ=65.00;MQ0=4;MQRankSum=-3.155;QD=4.40;ReadPosRankSum=0.381;VQSLOD=2.3240;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:6:0,6,71	0/1:5,0:5:9.37:9,0,23	0/0:26,0:20:53.30:0,53,874	0/0:42,0:35:71.58:0,72,1263	1/1:14,0:13:6.46:50,6,0	1/1:8,6:14:8.06:81,8,0	1/1:0,13:13:6.02:79,6,0	0/1:29,0:23:99:109,0,124	1/1:11,0:11:0.47:1,0,0	0/1:18,0:18:25.15:186,0,25	1/1:11,1:12:8.97:70,9,0	0/0:17,0:17:18.20:0,18,205	0/0:11,0:11:10.05:0,10,86	1/1:14,0:14:2.68:19,3,0	0/0:10,0:10:2.92:0,3,8	1/1:14,0:14:17.67:140,18,0	1/1:6,0:6:5.94:41,6,0	0/1:5,0:5:11.20:26,0,11	1/1:23,0:21:18.78:153,19,0	1/1:13,0:13:3.25:41,3,0	1/1:9,0:9:2.99:24,3,0	0/0:14,0:14:5.75:0,6,105	0/0:18,0:18:15.01:0,15,175	0/0:15,0:15:5.96:0,6,45	0/0:19,0:19:22.16:0,22,246	1/1:21,0:21:1.18:119,1,0	0/0:13,1:14:0.75:0,1,44	0/0:2,0:2:4.96:0,5,23
chr10	14571752	.	GTGTCTGTC	G	1682.57	PASS	AB=1.000;AC=43;AF=0.796;AN=54;BaseQRankSum=6.159;DP=421;FS=4.464;HRun=0;HaplotypeScore=184.6988;InbreedingCoeff=0.2669;MQ=58.53;MQ0=4;MQRankSum=-3.589;QD=5.26;ReadPosRankSum=1.000;VQSLOD=2.5029;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:13:5.98:46,6,0	1/1:5,0:5:8.90:61,9,0	0/0:30,0:20:37.58:0,38,857	0/0:48,0:34:44.68:0,45,1397	0/0:14,0:13:0.47:0,0,1	1/1:13,0:13:7.74:49,8,0	1/1:11,0:11:4.51:23,5,0	0/1:28,0:22:99:121,0,185	1/1:11,0:11:0.46:1,0,0	1/1:18,0:18:8.14:280,8,0	1/1:11,0:11:3:25,3,0	1/1:17,0:17:8.89:61,9,0	1/1:11,0:10:5.83:64,6,0	1/1:14,0:14:2.81:17,3,0	0/1:13,0:13:0:0,0,0	1/1:11,0:11:5.84:34,6,0	1/1:6,0:6:2.92:17,3,0	1/1:4,0:4:7.65:48,8,0	1/1:4,15:17:14.87:247,15,0	1/1:14,0:14:7.18:66,7,0	./.	0/1:13,0:13:4.06:19,0,4	1/1:18,0:17:8.87:68,9,0	1/1:15,0:15:0.24:1,0,0	1/1:17,0:17:14.99:171,15,0	0/1:23,0:23:19.82:233,0,20	0/1:13,0:12:2.47:89,0,2	1/1:2,0:2:5.99:75,6,0
chr10	14571754	.	GTCTGTCTGTC	G	2350.60	PASS	AB=0.993;AC=43;AF=0.768;AN=56;BaseQRankSum=3.761;DP=412;FS=1.229;HRun=0;HaplotypeScore=185.5694;InbreedingCoeff=0.1254;MQ=51.54;MQ0=4;MQRankSum=-1.886;QD=7.28;ReadPosRankSum=-0.172;VQSLOD=2.1121;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:12,0:12:6:69,6,0	1/1:5,0:5:3.57:36,4,0	0/0:29,0:18:49.30:0,49,1569	0/0:49,0:32:33.58:0,34,2378	0/1:13,0:12:0.04:0,0,0	1/1:12,0:13:0.85:53,1,0	1/1:8,0:11:5.89:36,6,0	0/1:28,0:22:99:248,0,372	0/0:10,0:10:2.65:0,3,11	0/1:18,1:19:99:356,0,160	1/1:11,0:11:6:73,6,0	1/1:12,3:16:17.88:149,18,0	1/1:8,3:10:5.89:107,6,0	1/1:9,4:14:2.86:51,3,0	1/1:11,0:11:2.98:22,3,0	0/1:10,0:10:1.57:55,0,2	1/1:4,0:4:2.84:14,3,0	1/1:4,0:4:5.83:41,6,0	0/1:19,0:17:99:132,0,167	1/1:13,0:14:15.60:103,16,0	1/1:9,0:9:2.99:24,3,0	1/1:11,2:13:5.96:33,6,0	1/1:13,3:16:8.89:115,9,0	1/1:10,5:15:0.25:1,0,0	1/1:8,9:17:17.93:257,18,0	0/1:22,0:22:99:381,0,108	0/1:13,0:12:11.63:106,0,12	1/1:2,0:2:3.89:34,4,0
chr10	14571770	.	GTC	G	207.62	PASS	AB=0.960;AC=30;AF=0.600;AN=50;BaseQRankSum=4.931;DP=421;FS=1.785;HRun=0;HaplotypeScore=159.8508;InbreedingCoeff=0.1401;MQ=42.32;MQ0=6;MQRankSum=-0.903;QD=0.82;ReadPosRankSum=-1.242;VQSLOD=2.4184;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/0:5,0:4:5.68:0,6,32	0/0:46,0:19:44.13:0,44,614	0/0:68,0:32:46.59:0,47,882	0/1:14,0:13:0:0,0,0	1/1:9,0:9:3.59:19,4,0	1/1:9,0:9:4.42:12,4,0	0/1:26,0:16:11.97:12,0,313	1/1:8,0:8:2.68:11,3,0	0/1:16,0:16:65.79:66,0,68	./.	0/0:9,3:12:0:0,0,0	1/1:10,3:12:3:26,3,0	1/1:12,3:14:0.76:2,1,0	0/1:8,0:8:0:0,0,0	1/1:9,0:9:1.52:4,2,0	1/1:5,0:5:2.96:19,3,0	0/1:4,0:4:10.83:12,0,11	0/1:20,0:17:13.32:13,0,33	1/1:16,0:16:1.36:21,1,0	./.	1/1:9,2:9:0.94:2,1,0	0/1:13,3:15:0:0,0,0	0/1:11,5:16:0.03:0,0,0	1/1:10,9:19:5.97:48,6,0	0/1:15,0:15:60.74:61,0,83	0/0:11,0:10:8.54:0,9,53	0/1:4,0:4:5.35:5,0,16
chr10	14571781	.	CGTGAGTGTGT	C	1341.07	PASS	AB=0.836;AC=31;AF=0.646;AN=48;BaseQRankSum=4.148;DP=371;FS=2.816;HRun=0;HaplotypeScore=156.4999;InbreedingCoeff=0.0663;MQ=48.33;MQ0=6;MQRankSum=-1.359;QD=6.51;ReadPosRankSum=2.993;VQSLOD=2.7846;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:4,1:4:6.02:0,6,72	0/0:49,0:18:34.12:0,34,1030	0/0:71,0:28:52.91:0,53,1388	0/1:5,6:12:0:0,0,0	1/1:9,0:9:2.90:16,3,0	0/0:7,0:7:2.71:0,3,12	1/1:15,0:9:11.94:108,12,0	1/1:4,5:9:3.01:67,3,0	0/1:5,11:15:18.46:364,0,18	./.	1/1:11,0:11:2.99:34,3,0	0/1:12,0:11:29:95,0,29	1/1:13,0:13:2.44:13,2,0	0/1:2,7:8:0:0,0,0	1/1:2,4:7:6.01:121,6,0	0/1:4,0:4:19.59:29,0,20	0/1:3,0:3:10.82:11,0,36	1/1:5,0:4:4.26:63,4,0	0/1:10,1:11:20.66:21,0,26	./.	1/1:11,0:9:0.47:1,0,0	./.	1/1:11,0:12:0.36:1,0,0	1/1:16,0:19:5.98:74,6,0	1/1:6,6:12:8.15:252,8,0	0/1:7,0:8:99:153,0,104	0/1:6,0:6:37.17:56,0,37
chr10	14571782	.	GTGAGTGTGTGTGTCTGTC	G	1287.57	PASS	AB=0.991;AC=31;AF=0.646;AN=48;BaseQRankSum=3.647;DP=382;FS=0.777;HRun=0;HaplotypeScore=181.8858;InbreedingCoeff=0.1311;MQ=49.52;MQ0=6;MQRankSum=-0.675;QD=6.25;ReadPosRankSum=1.725;VQSLOD=2.4499;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	0/0:5,0:4:8.92:0,9,101	0/0:52,0:19:43.64:0,44,1222	0/0:74,0:28:46.99:0,47,1655	0/1:12,0:12:0:0,0,0	1/1:10,0:10:4.46:20,4,0	1/1:8,0:8:0.89:2,1,0	1/1:15,0:9:12.04:191,12,0	1/1:9,0:9:3.01:38,3,0	0/1:16,0:15:84.53:175,0,85	./.	1/1:10,1:11:3.01:100,3,0	1/1:12,1:12:6.63:380,7,0	0/0:13,1:13:3.47:0,3,26	0/1:10,0:9:0.13:0,0,0	1/1:7,0:7:5.99:61,6,0	0/1:3,0:4:0.20:0,0,10	0/1:3,0:3:14.17:14,0,55	1/1:5,0:4:5.98:55,6,0	0/1:11,0:11:36.54:37,0,39	./.	1/1:10,1:9:0.47:1,0,0	./.	1/1:11,1:12:0.28:1,0,0	1/1:19,1:20:5.98:80,6,0	0/1:12,0:12:23.63:159,0,24	0/1:10,0:10:74.65:75,0,193	0/1:6,0:6:35.57:36,0,104
chr10	14571794	.	GTCTGTCTGTC	G	1527.20	PASS	AB=0.874;AC=33;AF=0.688;AN=48;BaseQRankSum=4.333;DP=403;FS=10.418;HRun=0;HaplotypeScore=166.2762;InbreedingCoeff=0.1818;MQ=43.23;MQ0=10;MQRankSum=-1.270;QD=6.85;ReadPosRankSum=3.350;VQSLOD=2.1640;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/1:6,0:5:8.59:9,0,31	0/0:57,0:17:34.96:0,35,1213	0/0:81,0:27:53.98:0,54,1652	0/1:12,1:13:0:0,0,0	./.	1/1:9,0:9:2.94:18,3,0	1/1:13,0:5:6.51:31,7,0	1/1:10,0:10:5.95:94,6,0	1/1:16,0:15:8.72:362,9,0	./.	1/1:13,0:13:2.99:36,3,0	1/1:13,0:12:18.36:168,18,0	1/1:15,0:14:1.88:6,2,0	0/1:13,0:12:0:0,0,0	1/1:6,1:7:6.02:123,6,0	0/1:4,0:4:3.31:68,0,3	0/0:3,0:3:3.01:0,3,45	1/1:3,0:2:3.01:34,3,0	0/1:5,9:14:21.48:53,0,21	./.	1/1:11,0:10:0.47:1,0,0	0/0:13,0:12:0:0,0,0	1/1:12,0:12:0.07:1,0,0	1/1:20,0:20:3.01:32,3,0	1/1:11,0:11:3.40:273,3,0	0/1:13,0:12:91.75:269,0,92	0/1:2,5:7:31.34:80,0,31
chr10	14571798	.	GTC	G	391.17	PASS	AB=0.922;AC=28;AF=0.609;AN=46;BaseQRankSum=4.379;DP=409;FS=5.686;HRun=0;HaplotypeScore=156.5390;InbreedingCoeff=0.1470;MQ=43.31;MQ0=11;MQRankSum=-1.699;QD=1.84;ReadPosRankSum=3.018;VQSLOD=2.3739;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:5,0:5:2.57:0,3,11	0/0:59,0:17:29.29:0,29,679	0/0:77,0:26:47.36:0,47,813	0/1:13,2:15:0:0,0,0	./.	1/1:10,0:10:2.26:7,2,0	1/1:13,0:5:1.39:20,1,0	1/1:10,1:10:5.91:55,6,0	1/1:16,1:16:2.86:121,3,0	./.	1/1:13,0:13:2.66:11,3,0	1/1:13,0:12:6.52:61,7,0	0/0:14,0:13:2.94:0,3,18	0/1:11,2:12:0:0,0,0	1/1:9,0:9:1.98:10,2,0	0/1:4,1:5:13.50:32,0,14	0/0:3,0:3:3:0,3,25	1/1:3,0:2:2.94:18,3,0	0/1:12,1:13:1.31:31,0,1	./.	1/1:12,0:11:0.47:1,0,0	./.	0/1:13,0:13:0.04:0,0,0	1/1:20,0:20:2.92:17,3,0	0/1:13,0:12:26.34:41,0,26	0/1:11,2:12:70.93:71,0,74	0/1:7,0:7:19.81:20,0,23
chr10	14571811	.	TGA	T	936.49	PASS	AB=0.950;AC=32;AF=0.696;AN=46;BaseQRankSum=4.102;DP=421;FS=14.024;HRun=0;HaplotypeScore=168.1812;InbreedingCoeff=0.2850;MQ=41.01;MQ0=11;MQRankSum=-3.894;QD=3.73;ReadPosRankSum=-0.933;VQSLOD=1.9554;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:7,0:7:0.47:0,0,1	0/0:48,0:14:39.03:0,39,618	0/0:57,0:26:51.20:0,51,821	0/1:21,0:21:0:0,0,0	./.	1/1:9,0:9:2.48:10,2,0	1/1:14,0:7:6.35:34,6,0	1/1:10,0:8:5.91:53,6,0	1/1:23,0:21:14.81:204,15,0	./.	1/1:10,9:19:6:72,6,0	1/1:6,8:13:17.22:233,17,0	0/0:8,3:10:2.04:0,2,6	0/1:15,0:14:0:0,0,0	1/1:12,0:12:2.15:13,2,0	0/1:5,0:5:9.37:49,0,9	1/1:3,0:3:4:36,4,0	1/1:7,0:7:17.47:105,17,0	1/1:13,0:13:3.01:37,3,0	./.	1/1:6,9:14:0.47:1,0,0	1/1:4,14:18:2.94:18,3,0	0/1:8,6:14:0:0,0,0	./.	0/1:17,0:15:7.48:88,0,7	0/1:16,0:15:51.38:83,0,51	1/1:6,0:6:1.88:24,2,0
chr10	14571819	.	TGCGTGA	T	1795.94	PASS	AB=0.976;AC=38;AF=0.826;AN=46;BaseQRankSum=6.419;DP=394;FS=19.637;HRun=0;HaplotypeScore=170.3240;InbreedingCoeff=0.5432;MQ=39.07;MQ0=10;MQRankSum=-4.897;QD=7.04;ReadPosRankSum=1.715;VQSLOD=1.4456;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	1/1:8,0:8:3.48:32,3,0	0/0:38,0:13:31.39:0,31,781	0/0:48,0:27:36.28:0,36,1530	0/1:19,1:20:0:0,0,0	./.	1/1:0,11:11:2.96:62,3,0	1/1:15,0:8:13.72:87,14,0	1/1:10,0:8:5.96:48,6,0	1/1:23,0:21:33.56:378,34,0	./.	1/1:18,0:18:9.03:129,9,0	1/1:10,0:10:20.08:266,20,0	0/0:7,1:8:1.55:0,2,4	0/1:15,0:14:0:0,0,0	1/1:13,0:13:5.99:66,6,0	1/1:5,0:5:9.19:53,9,0	1/1:3,0:3:8.75:75,9,0	1/1:8,0:7:18.51:136,19,0	1/1:14,0:14:2.88:15,3,0	./.	1/1:10,1:11:0.94:2,1,0	1/1:17,0:17:2.80:13,3,0	1/1:12,1:13:0.34:1,0,0	./.	1/1:17,0:15:31.20:226,31,0	1/1:17,0:16:27.91:228,28,0	1/1:7,0:7:8.99:100,9,0
chr10	14572850	.	AACACACACACACAC	A	2009.15	PASS	AB=0.968;AC=20;AF=0.556;AN=36;BaseQRankSum=2.863;DP=472;FS=1.992;HRun=0;HaplotypeScore=169.0400;InbreedingCoeff=0.5640;MQ=66.66;MQ0=10;MQRankSum=-0.249;QD=10.41;ReadPosRankSum=3.412;VQSLOD=2.3340;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:27,2:29:50.94:187,0,51	./.	0/0:40,0:23:12.04:0,12,366	0/0:37,0:23:12.04:0,12,321	./.	0/0:10,0:16:24.06:0,24,650	0/0:11,0:15:21.04:0,21,473	0/0:19,0:19:0.94:0,1,3	./.	./.	./.	1/1:7,0:7:3.01:109,3,0	1/1:9,1:10:6.42:42,6,0	1/1:7,5:12:17.85:152,18,0	./.	./.	1/1:21,0:20:2.97:20,3,0	1/1:16,0:16:2.37:8,2,0	0/1:19,0:17:0.05:0,0,0	./.	0/0:35,0:34:0.89:0,1,2	1/1:13,9:21:37.87:700,38,0	1/1:7,3:10:11.64:90,12,0	1/1:20,2:22:11.64:163,12,0	1/1:14,10:25:25.60:672,26,0	0/0:15,0:15:1.55:0,2,4	./.	./.
chr10	14572876	.	C	CG	41.77	PASS	AB=0.750;AC=7;AF=0.219;AN=32;BaseQRankSum=-0.616;DP=426;FS=1.399;HRun=0;HaplotypeScore=223.0671;InbreedingCoeff=0.7309;MQ=43.47;MQ0=22;MQRankSum=1.168;QD=2.32;ReadPosRankSum=-2.272;VQSLOD=2.8674;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:39:31.82:0,32,492	./.	0/0:33,0:13:33.26:0,33,434	0/0:47,0:13:34.60:0,35,458	./.	0/0:22,0:22:41.27:0,41,585	0/0:28,0:28:62.87:0,63,814	./.	./.	./.	./.	0/0:26,0:26:33.50:0,33,434	0/0:26,0:26:44.91:0,45,471	0/0:30,0:30:41.67:0,42,501	./.	./.	1/1:3,1:3:2.86:27,3,0	0/1:2,1:3:0.32:35,0,0	1/1:2,0:1:3:26,3,0	./.	1/1:2,7:8:6:63,6,0	0/0:43,0:41:64.79:0,65,705	0/0:19,0:19:17.50:0,17,174	0/0:42,0:42:35.13:0,35,453	0/0:43,0:43:59.32:0,59,595	./.	./.	./.
chr10	14572904	.	T	TAC	6336.68	PASS	AB=0.743;AC=13;AF=0.542;AN=24;BaseQRankSum=-3.254;DP=473;FS=75.095;HRun=0;HaplotypeScore=419.4257;InbreedingCoeff=-0.2000;MQ=52.59;MQ0=8;MQRankSum=-2.197;QD=16.59;ReadPosRankSum=6.671;VQSLOD=2.1556;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,25:43:7.04:1062,7,0	./.	0/0:43,0:32:62.42:0,62,782	0/0:46,0:21:40.02:0,40,423	./.	1/1:7,14:21:39.13:643,39,0	1/1:7,32:39:78.25:1282,78,0	./.	./.	./.	./.	0/1:5,15:43:99:634,0,176	0/1:4,9:27:99:425,0,122	0/1:7,14:42:99:560,0,154	./.	./.	./.	./.	./.	./.	./.	0/1:8,17:45:99:777,0,168	0/1:5,8:23:37.91:172,0,38	0/1:5,14:51:99:187,0,158	0/1:10,16:48:99:595,0,162	./.	./.	./.
chr10	14572985	.	GCACACACA	G	355.40	PASS	AC=4;AF=0.133;AN=30;BaseQRankSum=3.305;DP=365;FS=5.922;HRun=0;HaplotypeScore=250.1304;InbreedingCoeff=0.6863;MQ=48.34;MQ0=8;MQRankSum=-3.841;QD=9.61;ReadPosRankSum=-0.737;VQSLOD=1.9152;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:33:54.97:0,55,1877	./.	0/0:35,0:17:30.99:0,31,839	0/0:35,0:14:15.05:0,15,530	./.	1/1:5,9:14:6.02:99,6,0	1/1:11,11:23:16.30:356,16,0	./.	0/0:1,0:1:3.01:0,3,68	0/0:2,0:2:3.01:0,3,72	./.	0/0:25,0:27:33.11:0,33,1161	0/0:26,0:26:72.24:0,72,2202	0/0:26,0:26:33.52:0,34,971	./.	./.	./.	./.	0/0:2,0:1:3.01:0,3,49	./.	./.	0/0:30,0:32:30.56:0,31,928	0/0:16,0:19:18.53:0,19,541	0/0:61,0:63:99:0,108,3965	0/0:22,0:23:45.15:0,45,1659	./.	./.	./.
chr10	14573254	.	A	AAGGAGT	45266.43	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-3.118;DP=621;FS=5.420;HRun=0;HaplotypeScore=150.3521;InbreedingCoeff=0.9851;MQ=70.25;MQ0=0;MQRankSum=-9.722;QD=77.64;ReadPosRankSum=4.601;VQSLOD=5.4066;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,31:48:99:3597,108,0	1/1:5,3:8:21.07:709,21,0	0/0:21,0:21:54.17:0,54,1164	0/0:17,0:17:48.13:0,48,1026	1/1:5,9:16:14.57:490,15,0	1/1:5,17:23:48.16:1704,48,0	1/1:13,17:32:69.24:2340,69,0	1/1:17,14:32:66.21:2095,66,0	1/1:4,17:25:54.19:1882,54,0	1/1:4,16:21:48.16:1696,48,0	1/1:1,11:14:24.08:834,24,0	1/1:5,23:31:78.27:2717,78,0	1/1:1,17:19:54.19:1908,54,0	1/1:3,22:28:69.24:2416,69,0	1/1:7,19:26:72.25:2470,72,0	1/1:3,11:15:39.13:1375,39,0	1/1:11,17:30:69.24:2272,69,0	1/1:8,7:17:33.11:1154,33,0	1/1:9,16:26:57.20:1966,57,0	1/1:5,17:23:57.13:1944,57,0	1/1:5,16:22:42.14:1337,42,0	1/1:2,21:28:63.22:2200,63,0	1/1:5,12:19:42.14:1378,42,0	1/1:6,12:19:36.12:1198,36,0	1/1:2,6:10:21.07:746,21,0	1/1:6,12:19:48.16:1690,48,0	1/1:3,18:22:63.22:2188,63,0	1/1:3,6:10:27.09:960,27,0
chr10	14573691	.	CGT	C	1033.58	PASS	AB=0.992;AC=20;AF=0.435;AN=46;BaseQRankSum=4.117;DP=571;FS=0.692;HRun=0;HaplotypeScore=127.9116;InbreedingCoeff=0.4901;MQ=67.76;MQ0=10;MQRankSum=-2.642;QD=3.94;ReadPosRankSum=-0.180;VQSLOD=2.6250;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:17,9:26:32.90:314,33,0	./.	./.	0/0:34,0:24:9:0,9,110	0/0:14,0:14:2.99:0,3,24	1/1:18,0:18:3.02:7,3,0	0/1:29,0:30:7.94:8,0,70	0/0:24,0:24:18.47:0,18,215	0/0:18,0:19:3:0,3,26	0/0:23,0:22:4.24:0,4,130	0/0:4,0:4:3.01:0,3,43	1/1:16,7:24:10.87:160,11,0	1/1:6,6:16:20.15:167,20,0	1/1:12,4:17:11.84:127,12,0	0/1:39,0:39:1.70:2,0,103	0/1:23,0:23:41.61:42,0,74	0/0:29,0:30:17.99:0,18,192	0/0:14,0:16:17.60:0,18,255	0/0:19,0:20:17.98:0,18,183	./.	0/0:50,0:51:8.80:0,9,106	1/1:8,3:11:6:56,6,0	./.	1/1:19,7:28:24.09:204,24,0	1/1:10,4:14:10.55:92,11,0	0/0:21,0:21:14.92:0,15,140	0/1:15,0:14:20.12:20,0,110	./.
chr10	14573705	.	TGTGTGTGTGTGTGTGTGTGTGCACGGGCGCGC	T	4130.46	PASS	AB=0.973;AC=30;AF=0.652;AN=46;BaseQRankSum=-4.644;DP=578;FS=27.238;HRun=0;HaplotypeScore=346.8987;InbreedingCoeff=-0.0157;MQ=51.06;MQ0=25;MQRankSum=-2.234;QD=9.65;ReadPosRankSum=-2.938;VQSLOD=0.8112;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:31,0:30:32.61:33,0,1148	./.	./.	0/0:42,0:17:5.34:0,5,95	./.	0/0:21,0:21:11.97:0,12,344	0/0:32,0:32:19.55:0,20,630	1/1:16,0:15:4.73:70,5,0	1/1:14,0:14:3.01:86,3,0	1/1:14,6:18:15.05:576,15,0	1/1:3,0:3:2.96:19,3,0	0/1:31,0:31:50.68:51,0,1328	0/1:18,0:18:44.34:44,0,1625	0/1:24,0:24:83.59:84,0,1168	0/1:24,14:37:12.18:249,0,12	1/1:14,11:25:14.61:1205,15,0	1/1:25,0:24:6.02:129,6,0	1/1:13,0:12:19.83:258,20,0	1/1:19,0:18:16.90:218,17,0	./.	0/1:45,0:43:0.40:167,0,0	0/1:15,0:15:9.11:9,0,10	0/1:7,0:7:11.50:16,0,12	0/1:33,0:33:10.86:11,0,1163	0/1:18,0:18:36.70:37,0,179	1/1:12,5:17:9.02:177,9,0	1/1:12,4:15:15.11:693,15,0	./.
chr10	14573724	.	GTGCA	G	1108.69	PASS	AB=1.000;AC=20;AF=0.385;AN=52;BaseQRankSum=4.285;DP=506;FS=35.363;HRun=0;HaplotypeScore=162.6257;InbreedingCoeff=-0.2291;MQ=43.31;MQ0=23;MQRankSum=-4.409;QD=3.32;ReadPosRankSum=1.648;VQSLOD=1.3189;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:31,0:31:33.21:181,33,0	./.	0/1:37,0:3:2.94:3,0,54	0/0:46,0:11:11.68:0,12,245	0/0:7,0:7:2.99:0,3,24	1/1:17,4:20:11.93:95,12,0	0/1:23,0:23:20.20:63,0,20	0/0:10,0:9:6.24:0,6,116	0/0:13,0:13:3.01:0,3,33	0/1:11,0:10:34.48:34,0,82	0/0:6,0:6:2.99:0,3,33	0/1:26,0:26:28.35:122,0,28	0/1:21,0:21:43.67:181,0,44	0/1:18,0:18:4.31:90,0,4	0/1:27,0:26:12.74:13,0,127	0/1:19,0:19:72.81:111,0,73	0/0:30,0:29:3.12:0,3,132	0/1:16,0:15:37.88:38,0,171	0/0:11,0:10:6.10:0,6,95	./.	0/0:36,0:34:8.72:0,9,95	0/1:14,0:14:27.96:28,0,43	0/1:6,0:6:9.25:23,0,9	0/1:32,0:32:20.99:110,0,21	0/1:18,0:18:15.90:88,0,16	0/0:8,0:8:14.86:0,15,103	0/1:12,0:11:61.50:62,0,127	1/1:2,0:2:2.97:20,3,0
chr10	14573725	.	TGCACGGGCGCGC	T	3653.28	PASS	AB=0.899;AC=34;AF=0.654;AN=52;BaseQRankSum=-1.842;DP=497;FS=59.404;HRun=0;HaplotypeScore=180.9121;InbreedingCoeff=-0.2665;MQ=43.12;MQ0=23;MQRankSum=-3.253;QD=8.03;ReadPosRankSum=-2.473;VQSLOD=0.3034;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:32,0:32:99:123,0,391	./.	0/0:37,0:3:8.62:0,9,106	0/1:45,0:11:30.51:31,0,299	0/1:1,5:6:0:0,0,0	1/1:21,0:20:11.98:250,12,0	0/1:22,0:22:59.05:59,0,144	1/1:6,3:8:6.02:125,6,0	1/1:4,9:13:3:28,3,0	1/1:10,0:9:15.03:385,15,0	0/1:2,4:6:0:0,0,0	0/1:27,0:27:92.54:93,0,459	0/1:21,0:21:99:176,0,305	0/1:19,0:19:99:146,0,226	0/1:27,0:26:51.23:77,0,51	1/1:16,0:16:15.05:432,15,0	0/1:12,18:29:11.20:132,0,11	1/1:11,3:15:15.39:518,15,0	1/1:4,6:9:22.70:289,23,0	./.	0/1:12,21:32:9.26:59,0,9	0/1:13,0:13:32.89:33,0,39	0/1:5,0:5:8.96:76,0,9	0/1:34,0:34:2.68:3,0,348	0/1:18,0:18:61.88:109,0,62	1/1:8,0:8:9.02:144,9,0	0/1:12,0:11:22.17:253,0,22	1/1:0,2:2:3.01:113,3,0
chr10	14573726	.	GCA	G	1665.38	PASS	AB=0.993;AC=38;AF=0.760;AN=50;BaseQRankSum=-0.344;DP=443;FS=2.571;HRun=0;HaplotypeScore=144.6158;InbreedingCoeff=0.1443;MQ=44.04;MQ0=23;MQRankSum=0.049;QD=4.39;ReadPosRankSum=4.035;VQSLOD=2.7137;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:32,0:32:48.39:356,48,0	./.	0/1:39,0:3:2.94:3,0,54	0/0:44,0:11:12.66:0,13,215	./.	1/1:18,3:20:12.04:147,12,0	1/1:14,8:22:19.85:183,20,0	1/1:4,0:3:4.46:20,4,0	0/0:10,0:10:2.37:0,2,8	1/1:7,0:6:9.81:48,10,0	1/1:6,0:6:0.89:2,1,0	1/1:27,0:27:5.48:132,5,0	1/1:21,0:21:10.58:184,11,0	1/1:17,1:18:15.32:166,15,0	0/1:17,0:16:6.16:6,0,16	1/1:13,0:13:14.20:70,14,0	0/1:21,0:20:9.14:13,0,9	1/1:14,0:13:0.48:65,0,0	1/1:8,0:7:11.33:65,11,0	./.	0/1:25,0:24:2.49:2,0,4	0/1:13,0:13:23.26:34,0,23	0/1:5,0:5:4.40:10,0,4	1/1:34,0:34:8.98:155,9,0	0/1:17,0:18:0.31:85,0,0	1/1:5,0:5:1.82:5,2,0	0/1:7,0:7:22.31:28,0,22	1/1:2,0:2:2.97:20,3,0
chr10	14573727	.	CACGG	C	1281.91	PASS	AB=0.986;AC=26;AF=0.520;AN=50;BaseQRankSum=-1.133;DP=437;FS=1.351;HRun=0;HaplotypeScore=148.9218;InbreedingCoeff=-0.1220;MQ=44.11;MQ0=22;MQRankSum=-0.177;QD=4.39;ReadPosRankSum=4.401;VQSLOD=2.5332;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:32,0:32:14.63:84,0,15	./.	0/0:38,0:3:4.45:0,4,81	0/0:44,0:11:13.76:0,14,181	./.	1/1:9,12:20:12.04:203,12,0	1/1:17,5:22:21.45:259,21,0	1/1:4,0:3:4.56:37,5,0	0/0:10,0:10:2.84:0,3,14	1/1:7,0:6:9.02:92,9,0	0/0:6,0:6:2.98:0,3,24	0/1:26,0:26:59.27:95,0,59	0/1:21,0:21:72.34:72,0,106	0/1:18,0:18:31.47:31,0,49	0/1:17,0:16:19.18:19,0,51	1/1:13,0:13:15.02:140,15,0	0/1:21,0:20:26.17:26,0,46	0/1:12,0:11:45.71:121,0,46	1/1:8,0:7:1.68:63,2,0	./.	0/0:26,0:25:5.73:0,6,48	0/0:13,0:13:1.27:0,1,63	0/1:4,1:5:9.62:13,0,10	0/1:34,0:34:35.86:44,0,36	0/1:17,0:17:25.29:25,0,55	0/1:5,0:5:0.17:0,0,0	0/1:7,0:7:62.56:69,0,63	1/1:2,0:2:3.01:38,3,0
chr10	14573735	.	C	CGT	1897.83	PASS	AB=1.000;AC=29;AF=0.604;AN=48;BaseQRankSum=-2.411;DP=422;FS=5.564;HRun=0;HaplotypeScore=145.1608;InbreedingCoeff=0.5296;MQ=43.42;MQ0=17;MQRankSum=2.231;QD=6.83;ReadPosRankSum=-4.913;VQSLOD=1.3092;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:23,10:33:19.40:232,19,0	./.	0/0:45,0:8:11.58:0,12,77	0/1:44,0:11:31.20:31,0,96	./.	0/0:20,0:19:11.13:0,11,52	0/0:19,0:19:5.72:0,6,22	1/1:4,0:3:2.68:11,3,0	./.	0/1:6,0:6:8.52:30,0,9	./.	1/1:17,11:28:35.52:339,36,0	1/1:7,13:20:37.42:407,37,0	1/1:7,11:18:29.88:292,30,0	0/0:14,0:14:2.43:0,2,14	0/0:12,0:12:14.02:0,14,70	1/1:18,0:18:2.84:14,3,0	0/0:4,0:4:7.69:0,8,22	0/0:6,0:6:2.03:0,2,6	1/1:2,0:1:3:25,3,0	0/1:22,0:22:0:0,0,0	1/1:7,7:14:18.25:106,18,0	1/1:3,3:6:7.08:51,7,0	1/1:22,17:39:33.52:351,34,0	1/1:10,6:16:18.84:127,19,0	1/1:5,0:5:2.99:24,3,0	0/0:5,0:5:8.52:0,9,42	1/1:2,0:2:2.92:17,3,0
chr10	14573737	.	C	CGTGT	3044.92	PASS	AB=1.000;AC=38;AF=0.760;AN=50;BaseQRankSum=-4.105;DP=467;FS=1.029;HRun=0;HaplotypeScore=172.9303;InbreedingCoeff=0.2458;MQ=42.19;MQ0=18;MQRankSum=1.000;QD=7.63;ReadPosRankSum=-3.405;VQSLOD=2.4498;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:28,3:31:23.73:280,24,0	./.	0/1:48,0:10:6.01:6,0,102	0/1:45,0:11:30.72:31,0,69	./.	0/0:8,0:19:11.92:0,12,104	0/1:14,0:19:13.16:13,0,21	1/1:8,0:7:15.05:195,15,0	./.	1/1:13,0:13:3.38:381,3,0	0/1:4,0:4:0:0,0,0	1/1:19,5:25:25.82:311,26,0	1/1:12,8:20:31.33:396,31,0	1/1:13,6:18:26.97:345,27,0	0/0:15,0:15:2.53:0,3,27	0/0:15,0:15:14.88:0,15,124	1/1:20,0:20:3.01:34,3,0	0/1:8,0:8:8.50:140,0,9	1/1:8,0:8:11.67:118,12,0	1/1:3,0:2:3.01:50,3,0	1/1:36,0:36:2.25:17,2,0	1/1:10,4:14:13.54:158,14,0	1/1:3,2:6:9.01:119,9,0	1/1:29,9:39:19.37:283,19,0	1/1:9,7:16:11.89:122,12,0	1/1:8,0:8:8.63:121,9,0	0/1:7,0:7:34.96:35,0,70	1/1:2,0:2:3.01:36,3,0
chr10	14573749	.	T	TGCGCGCGCGC	215.66	PASS	AB=1.000;AC=4;AF=0.074;AN=54;BaseQRankSum=1.361;DP=492;FS=1.638;HRun=0;HaplotypeScore=192.8764;InbreedingCoeff=0.4164;MQ=44.68;MQ0=16;MQRankSum=-1.178;QD=5.68;ReadPosRankSum=0.357;VQSLOD=2.8521;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:51.65:0,52,1197	./.	0/0:54,0:15:45.15:0,45,1325	0/0:52,0:20:45.45:0,45,1234	0/0:8,0:8:5.98:0,6,71	0/1:18,0:18:42.57:174,0,43	1/1:9,3:16:5.90:135,6,0	0/0:10,0:10:24.08:0,24,680	0/0:11,0:11:12.04:0,12,305	0/0:16,0:16:41.92:0,42,1012	0/1:4,0:4:0:0,0,0	0/0:21,0:21:32.94:0,33,647	0/0:21,0:21:49.97:0,50,946	0/0:20,0:19:36.09:0,36,603	0/0:20,0:20:18.69:0,19,390	0/0:18,0:18:27.08:0,27,667	0/0:14,0:14:5.41:0,5,124	0/0:16,0:16:39.08:0,39,808	0/0:5,0:4:12.04:0,12,314	0/0:2,0:2:3.01:0,3,68	0/0:30,0:30:13.75:0,14,346	0/0:16,0:16:21.07:0,21,489	0/0:10,0:10:17.87:0,18,340	0/0:40,0:40:30.05:0,30,708	0/0:12,0:12:12.51:0,13,158	0/0:10,0:10:20.91:0,21,462	0/0:10,0:10:21.05:0,21,474	0/0:1,0:1:1.55:0,2,4
chr10	14574899	.	G	GT	12042.76	PASS	AB=0.844;AC=50;AF=0.893;AN=56;BaseQRankSum=-6.721;DP=648;FS=4.088;HRun=10;HaplotypeScore=66.1623;InbreedingCoeff=0.5827;MQ=69.59;MQ0=0;MQRankSum=-2.402;QD=19.36;ReadPosRankSum=1.780;VQSLOD=5.9700;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,32:34:75.19:798,75,0	1/1:0,10:10:30.08:320,30,0	0/0:12,0:11:16.45:0,16,121	0/0:14,0:12:4.01:0,4,98	1/1:4,17:21:38.65:382,39,0	0/1:19,0:18:5.81:9,0,6	1/1:19,0:17:5.15:14,5,0	1/1:10,14:24:45.08:468,45,0	1/1:4,15:19:24.06:255,24,0	1/1:10,23:34:25.73:660,26,0	1/1:2,16:19:37.95:408,38,0	1/1:4,17:21:33.08:352,33,0	1/1:1,13:14:30.07:320,30,0	1/1:3,23:27:65.83:668,66,0	1/1:3,23:28:59.15:648,59,0	1/1:7,24:32:50.29:570,50,0	1/1:5,34:39:90.22:953,90,0	1/1:5,14:20:20.82:406,21,0	1/1:11,15:26:23.20:424,23,0	0/1:17,13:31:9.23:441,0,9	1/1:3,15:18:39.10:416,39,0	1/1:6,18:24:50.67:503,51,0	1/1:2,22:26:56.81:572,57,0	1/1:3,24:27:66.17:703,66,0	1/1:2,23:25:33.08:352,33,0	1/1:9,20:29:35.45:563,35,0	1/1:12,13:25:60.43:608,60,0	1/1:5,5:10:24.02:232,24,0
chr10	14576422	.	ACC	A	582.99	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.623;DP=670;FS=4.340;HRun=3;HaplotypeScore=91.2979;InbreedingCoeff=0.9995;MQ=80.51;MQ0=0;MQRankSum=-8.711;QD=14.95;ReadPosRankSum=-0.668;VQSLOD=0.5407;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,132,2440	0/0:17,0:17:51.17:0,51,985	0/0:14,0:14:38.54:0,39,717	0/0:21,0:21:60.18:0,60,1073	0/0:18,0:18:51.02:0,51,985	1/1:4,16:20:47.74:357,48,0	1/1:4,15:19:47.66:347,48,0	0/0:27,0:27:81.28:0,81,1561	0/0:23,0:23:66.23:0,66,1274	0/0:28,0:28:81.27:0,81,1531	0/0:13,0:13:36.12:0,36,693	0/0:35,0:35:96.32:0,96,1823	0/0:24,0:24:66.22:0,66,1248	0/0:25,0:25:75.26:0,75,1447	0/0:20,0:20:60.21:0,60,1140	0/0:18,0:18:54.19:0,54,1043	0/0:34,0:34:99:0,102,1939	0/0:22,0:22:66.21:0,66,1234	0/0:24,0:24:69.23:0,69,1301	0/0:26,0:26:75.26:0,75,1430	0/0:41,0:41:99:0,117,2260	0/0:26,0:26:75.26:0,75,1445	0/0:11,0:11:33.10:0,33,605	0/0:29,0:29:87.30:0,87,1678	0/0:26,0:26:78.27:0,78,1501	0/0:30,0:30:90.31:0,90,1739	0/0:24,0:24:72.21:0,72,1286	0/0:11,0:11:30.10:0,30,580
chr10	14576427	.	G	GATAA	2189.10	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=10.155;DP=680;FS=5.865;HRun=0;HaplotypeScore=119.7458;InbreedingCoeff=0.9994;MQ=80.68;MQ0=0;MQRankSum=-10.038;QD=53.39;ReadPosRankSum=-1.961;VQSLOD=4.4073;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,129,2544	0/0:16,0:16:48.16:0,48,992	0/0:17,0:17:42.79:0,43,820	0/0:20,0:20:56.96:0,57,1069	0/0:19,0:19:54.05:0,54,1132	1/1:5,16:21:63.09:1200,63,0	1/1:5,15:20:54.14:1111,54,0	0/0:26,0:26:78.26:0,78,1592	0/0:22,0:22:66.23:0,66,1384	0/0:30,0:30:87.29:0,87,1757	0/0:14,0:14:42.14:0,42,865	0/0:35,0:35:99:0,99,2063	0/0:22,0:22:66.23:0,66,1385	0/0:27,0:27:81.28:0,81,1688	0/0:19,0:19:57.18:0,57,1156	0/0:20,0:20:60.21:0,60,1246	0/0:35,0:35:99:0,105,2165	0/0:20,0:20:60.21:0,60,1236	0/0:22,0:22:66.23:0,66,1379	0/0:25,0:25:72.25:0,72,1496	0/0:44,0:44:99:0,132,2675	0/0:30,0:30:84.29:0,84,1750	0/0:11,0:11:30.10:0,30,629	0/0:30,0:30:90.27:0,90,1830	0/0:27,0:27:81.28:0,81,1695	0/0:29,0:29:87.30:0,87,1813	0/0:25,0:25:72.25:0,72,1499	0/0:10,0:10:30.10:0,30,629
chr10	14577342	.	TGCAGGA	T	1121.26	PASS	AB=1.000;AC=12;AF=0.214;AN=56;BaseQRankSum=4.222;DP=580;FS=3.118;HRun=0;HaplotypeScore=146.9708;InbreedingCoeff=0.0984;MQ=65.49;MQ0=3;MQRankSum=-2.459;QD=4.15;ReadPosRankSum=0.358;VQSLOD=2.7849;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:90.49:0,90,1053	0/0:7,0:7:6.70:0,7,51	0/0:27,0:20:13.52:0,14,547	0/0:31,0:23:50.75:0,51,720	0/0:7,0:7:0.41:0,0,64	1/1:3,16:19:5.35:34,5,0	1/1:30,0:28:79.30:1062,79,0	0/0:15,0:14:20.21:0,20,164	0/1:25,0:25:12.76:13,0,134	0/0:14,0:14:12.97:0,13,143	0/0:6,0:5:3:0,3,26	0/0:27,0:27:72.73:0,73,931	0/0:25,0:25:29.51:0,30,576	0/0:18,0:18:40.49:0,40,608	0/1:19,0:19:22.99:23,0,122	0/1:10,0:10:1.73:2,0,44	0/1:24,0:24:5.71:6,0,125	0/1:40,0:40:99:100,0,169	0/0:8,0:8:10.76:0,11,85	0/0:13,0:13:12.72:0,13,105	0/1:68,0:67:11.71:12,0,456	0/0:9,0:9:20.92:0,21,279	0/0:5,0:5:9.02:0,9,125	0/0:39,0:39:61.99:0,62,1012	0/0:15,0:15:35.97:0,36,375	0/1:20,0:20:1.65:2,0,150	0/1:15,0:15:11.14:11,0,106	0/0:4,0:3:5.91:0,6,39
chr10	14577366	.	TGCAGGA	T	2537.27	PASS	AB=1.000;AC=40;AF=0.800;AN=50;BaseQRankSum=0.729;DP=544;FS=27.669;HRun=0;HaplotypeScore=143.3046;InbreedingCoeff=0.1426;MQ=60.62;MQ0=15;MQRankSum=2.476;QD=5.52;ReadPosRankSum=3.100;VQSLOD=0.9738;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:24:18.08:210,18,0	0/1:4,0:4:0.05:0,0,0	0/0:34,0:19:4.04:0,4,11	0/0:33,0:23:7.34:0,7,63	./.	0/1:17,0:17:19.78:20,0,30	0/1:30,0:29:20.52:21,0,123	1/1:16,0:13:5.57:31,6,0	1/1:19,0:19:11.92:106,12,0	1/1:15,0:14:9.41:94,9,0	./.	1/1:23,0:22:31.07:329,31,0	1/1:11,12:22:3.01:51,3,0	1/1:16,0:16:1.05:288,1,0	1/1:17,0:17:11.48:85,11,0	1/1:11,0:11:14.85:115,15,0	1/1:27,0:27:9.80:93,10,0	1/1:37,0:37:27.33:219,27,0	0/1:10,0:8:6.89:13,0,7	./.	1/1:70,0:66:12.36:99,12,0	0/1:10,0:8:7.99:18,0,8	0/1:4,0:4:10.01:35,0,10	1/1:35,0:35:57.06:490,57,0	1/1:10,0:10:17.99:172,18,0	1/1:19,0:17:10.93:68,11,0	1/1:16,0:16:1.63:94,2,0	1/1:4,0:3:2.92:17,3,0
chr10	14577404	.	CAGGTGT	C	6870.96	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-1.295;DP=522;FS=3.198;HRun=0;HaplotypeScore=115.0627;InbreedingCoeff=0.5417;MQ=58.07;MQ0=12;MQRankSum=1.044;QD=14.97;ReadPosRankSum=3.565;VQSLOD=4.1449;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:22:23.21:230,23,0	1/1:5,0:5:9.03:142,9,0	0/0:34,0:24:53.74:0,54,708	0/0:28,0:21:46.84:0,47,543	1/1:0,8:8:8.92:88,9,0	1/1:14,1:15:23.92:306,24,0	1/1:28,0:27:62.21:783,62,0	1/1:4,12:15:33.74:376,34,0	1/1:0,17:17:12.04:249,12,0	1/1:3,16:18:43:638,43,0	1/1:3,0:2:6.02:89,6,0	1/1:21,0:21:34.18:413,34,0	1/1:16,0:15:0.82:45,1,0	1/1:15,0:15:20.98:329,21,0	1/1:2,10:12:6.02:108,6,0	1/1:0,18:18:14.85:294,15,0	1/1:1,20:21:9.03:174,9,0	1/1:4,29:33:6.91:139,7,0	1/1:2,12:13:27.87:302,28,0	1/1:4,0:3:6.49:100,6,0	1/1:9,63:69:11.97:139,12,0	1/1:12,0:11:7.24:81,7,0	1/1:6,0:6:5.40:48,5,0	1/1:34,0:34:66.79:532,67,0	1/1:5,0:5:4.16:90,4,0	1/1:2,16:17:42.50:563,43,0	1/1:11,7:18:42.44:557,42,0	1/1:0,5:5:3.01:57,3,0
chr10	14577776	.	TCACACACA	T	406.81	PASS	AB=0.871;AC=12;AF=0.261;AN=46;BaseQRankSum=1.911;DP=520;FS=4.918;HRun=0;HaplotypeScore=124.5826;InbreedingCoeff=0.5031;MQ=68.19;MQ0=10;MQRankSum=-2.686;QD=2.83;ReadPosRankSum=0.339;VQSLOD=2.1060;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:27:7.18:43,7,0	0/0:15,0:15:21.04:0,21,537	./.	./.	0/0:14,0:14:12:0,12,397	0/0:15,0:15:9.02:0,9,179	0/0:16,0:23:26.92:0,27,509	./.	0/0:20,0:20:21.05:0,21,596	0/0:11,0:11:9.03:0,9,232	./.	0/1:17,7:26:19.24:344,0,19	1/1:8,1:8:3.01:74,3,0	./.	0/0:23,0:27:24.06:0,24,672	0/0:14,0:15:19.76:0,20,625	0/0:30,0:33:57.20:0,57,1959	0/0:13,0:17:27.05:0,27,824	0/0:11,0:11:9.02:0,9,252	0/0:7,0:7:12.04:0,12,457	0/0:31,0:30:45.15:0,45,1478	1/1:18,0:18:2.97:20,3,0	0/1:8,0:8:14.20:14,0,18	1/1:26,8:33:0.47:1,0,0	1/1:17,4:21:3.01:40,3,0	0/0:15,0:15:18.06:0,18,677	0/0:15,0:15:15.05:0,15,523	0/0:11,0:11:12.04:0,12,426
chr10	14578588	.	T	TGCCCC	20161.13	PASS	AB=0.631;AC=32;AF=0.571;AN=56;BaseQRankSum=8.945;DP=582;FS=17.021;HRun=0;HaplotypeScore=269.4613;InbreedingCoeff=-0.1442;MQ=61.27;MQ0=2;MQRankSum=-9.120;QD=40.89;ReadPosRankSum=6.589;VQSLOD=3.6006;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:11,7:19:14.96:604,0,15	1/1:2,7:10:2.45:545,2,0	0/0:20,0:20:60.18:0,60,1277	0/0:17,0:17:42.11:0,42,836	1/1:5,9:18:29.38:618,29,0	0/0:17,0:17:48.15:0,48,1043	0/0:35,0:35:99:0,105,2322	0/1:7,5:17:75.80:696,0,76	0/1:10,16:30:95.98:1352,0,96	1/1:9,7:25:19.90:960,20,0	0/1:4,9:15:1.88:684,0,2	1/1:6,15:24:6.08:1375,6,0	0/1:12,13:32:11.87:1611,0,12	0/1:10,5:20:9.65:748,0,10	0/1:11,10:28:46.74:1132,0,47	0/1:4,7:12:19.56:643,0,20	0/1:8,9:20:99:655,0,109	0/1:5,6:14:60.06:618,0,60	0/1:11,4:16:49.31:532,0,49	1/1:5,4:13:24.03:431,24,0	0/1:16,6:26:4.38:718,0,4	1/1:8,16:29:41.02:1308,41,0	1/1:9,9:23:33.25:981,33,0	0/1:6,9:17:28.17:651,0,28	1/1:9,9:31:33.06:1257,33,0	0/1:8,8:24:23.30:916,0,23	0/1:9,9:21:54.31:896,0,54	0/1:1,2:6:10.54:230,0,11
chr10	14578591	.	C	CATGCT	13409.08	PASS	AB=0.732;AC=46;AF=0.821;AN=56;BaseQRankSum=14.084;DP=541;FS=1.311;HRun=0;HaplotypeScore=270.9101;InbreedingCoeff=0.7350;MQ=61.01;MQ0=2;MQRankSum=-12.746;QD=29.54;ReadPosRankSum=6.343;VQSLOD=4.0582;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,7:17:11.61:428,12,0	1/1:3,7:10:26.64:433,27,0	0/0:20,0:20:57.19:0,57,1206	0/0:15,0:15:37.94:0,38,798	1/1:5,9:14:34.66:433,35,0	0/0:16,0:16:48.16:0,48,1060	0/0:36,0:36:99:0,102,2269	1/1:10,5:15:7.89:340,8,0	1/1:14,16:30:56.42:1003,56,0	1/1:18,7:25:31.77:728,32,0	1/1:6,9:15:29.28:488,29,0	1/1:7,15:22:59.69:1043,60,0	0/1:16,13:29:18.59:840,0,19	0/1:12,5:17:12.98:363,0,13	1/1:18,10:30:54.52:751,55,0	1/1:4,7:11:27.46:478,27,0	1/1:11,9:20:22.23:472,22,0	1/1:7,6:13:28.21:436,28,0	1/1:8,4:11:23.92:312,24,0	1/1:7,4:11:21.49:283,21,0	1/1:14,6:20:21.76:246,22,0	1/1:10,15:26:61.21:864,61,0	1/1:11,9:21:27.36:525,27,0	1/1:8,9:17:25.96:504,26,0	1/1:19,9:29:38.88:777,39,0	1/1:15,8:23:44.99:772,45,0	1/1:10,8:19:40.83:716,41,0	1/1:4,2:6:14.54:175,15,0
chr10	14578594	.	CT	C	5687.77	PASS	AB=0.614;AC=39;AF=0.696;AN=56;BaseQRankSum=11.036;DP=539;FS=14.947;HRun=1;HaplotypeScore=267.0930;InbreedingCoeff=0.1852;MQ=64.08;MQ0=2;MQRankSum=-11.222;QD=12.64;ReadPosRankSum=9.301;VQSLOD=1.5553;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,11:15:20.87:279,21,0	1/1:1,10:11:13.79:139,14,0	0/0:21,0:21:63.15:0,63,968	0/0:18,0:18:51.09:0,51,734	0/1:4,10:14:25.96:105,0,26	0/0:15,0:15:45.15:0,45,719	0/0:35,0:35:99:0,105,1651	1/1:5,10:15:9.35:224,9,0	1/1:7,24:30:33.53:473,34,0	0/1:10,14:24:26.02:289,0,26	1/1:2,13:15:9.26:173,9,0	1/1:3,19:22:39.36:378,39,0	1/1:10,20:30:6.30:318,6,0	0/1:4,9:14:10.82:195,0,11	1/1:9,21:30:6.66:416,7,0	1/1:1,10:11:16.80:175,17,0	1/1:3,17:20:13.34:307,13,0	1/1:3,11:14:8.05:195,8,0	1/1:3,9:12:13.92:195,14,0	0/1:4,7:11:15.08:105,0,15	0/1:4,16:20:14.36:138,0,14	1/1:5,22:27:0.12:215,0,0	0/1:7,12:19:9.69:207,0,10	1/1:2,15:17:9.34:224,9,0	0/1:13,17:30:71.20:240,0,71	0/1:9,14:22:8.44:299,0,8	1/1:3,16:19:24.61:335,25,0	0/1:3,3:6:7.04:62,0,7
chr10	14578897	.	TC	T	18582.85	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=5.516;DP=620;FS=1.394;HRun=2;HaplotypeScore=101.7924;InbreedingCoeff=0.9914;MQ=73.97;MQ0=3;MQRankSum=-3.430;QD=35.19;ReadPosRankSum=4.085;VQSLOD=4.9655;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,35:35:99:1324,102,0	1/1:0,8:8:24.08:311,24,0	0/0:21,0:21:57.18:0,57,822	0/0:17,0:16:42.14:0,42,603	1/1:0,14:14:21.07:273,21,0	0/0:23,0:23:69.22:0,69,1014	0/0:31,0:31:90.30:0,90,1348	1/1:0,32:31:93.30:1207,93,0	1/1:0,12:12:33.11:428,33,0	1/1:0,34:33:93.30:1206,93,0	1/1:0,9:9:18.06:234,18,0	1/1:0,27:27:75.24:974,75,0	1/1:0,15:15:42.14:545,42,0	1/1:0,26:26:78.25:1013,78,0	1/1:0,23:23:63.20:818,63,0	1/1:0,16:16:45.15:584,45,0	1/1:0,39:39:99:1363,105,0	1/1:0,23:23:57.18:737,57,0	1/1:0,19:15:45.13:570,45,0	1/1:0,8:8:24.08:311,24,0	1/1:1,69:70:99:2610,202,0	1/1:0,11:11:18.06:234,18,0	1/1:0,10:10:24.08:311,24,0	1/1:0,37:37:99:1363,105,0	1/1:0,17:17:51.17:662,51,0	1/1:1,23:24:66.20:843,66,0	1/1:0,11:11:30.10:389,30,0	1/1:0,8:8:21.07:272,21,0
chr10	14579931	.	T	TG	7714.17	PASS	AB=0.581;AC=31;AF=0.554;AN=56;BaseQRankSum=-12.124;DP=518;FS=11.858;HRun=8;HaplotypeScore=54.9784;InbreedingCoeff=0.9220;MQ=78.46;MQ0=0;MQRankSum=-1.581;QD=26.60;ReadPosRankSum=-1.580;VQSLOD=4.2487;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:90.04:0,90,819	1/1:1,12:13:33.10:381,33,0	0/0:16,0:16:9.44:0,9,273	0/0:12,0:12:20.93:0,21,174	1/1:2,14:16:42.12:485,42,0	0/0:24,0:23:66.03:0,66,604	0/0:21,0:21:57.03:0,57,521	1/1:9,16:26:26.46:512,26,0	1/1:2,16:18:45.13:519,45,0	1/1:2,13:15:36.10:415,36,0	1/1:3,20:23:51.15:587,51,0	0/0:16,0:16:38.98:0,39,350	0/0:22,0:22:60.02:0,60,549	0/0:9,0:9:21:0,21,192	1/1:1,15:16:39.12:450,39,0	1/1:1,16:18:47.97:534,48,0	1/1:1,19:20:54.16:623,54,0	1/1:0,18:19:50.98:568,51,0	1/1:4,11:16:41.92:442,42,0	1/1:8,12:20:30.09:346,30,0	0/1:5,13:18:12.47:373,0,12	0/0:23,0:23:66.04:0,66,604	0/0:13,0:13:24.01:0,24,220	0/0:23,1:24:28.42:0,28,515	0/0:17,0:17:48.02:0,48,439	1/1:5,18:23:54.14:613,54,0	1/1:2,19:21:50.98:588,51,0	1/1:0,8:8:24.07:277,24,0
chr10	14581651	.	A	AG	3071.88	PASS	AB=0.727;AC=49;AF=0.907;AN=54;BaseQRankSum=-3.526;DP=209;FS=10.499;HRun=7;HaplotypeScore=30.5108;InbreedingCoeff=0.3725;MQ=70.46;MQ0=0;MQRankSum=-0.243;QD=16.08;ReadPosRankSum=2.254;VQSLOD=1.8959;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,6:10:15.05:181,15,0	1/1:0,2:2:3.01:36,3,0	0/0:8,0:8:17.43:0,17,112	0/0:5,0:5:5.12:0,5,40	1/1:6,3:9:5.98:56,6,0	1/1:3,7:10:12.04:145,12,0	1/1:6,5:11:23.65:260,24,0	1/1:10,1:10:9.46:84,9,0	1/1:2,5:7:18.04:207,18,0	1/1:2,10:12:27.08:318,27,0	1/1:5,3:7:6.01:61,6,0	1/1:1,4:5:3.01:36,3,0	1/1:4,6:10:21.52:238,22,0	0/1:5,3:8:14.56:98,0,15	1/1:1,4:5:6.02:72,6,0	1/1:2,3:5:9.03:109,9,0	1/1:2,9:11:18.05:213,18,0	1/1:1,8:9:15.05:180,15,0	1/1:0,4:4:12.04:145,12,0	1/1:0,3:3:3.01:36,3,0	1/1:4,7:11:12.04:145,12,0	./.	1/1:3,1:4:0.47:1,0,0	1/1:4,8:12:15.05:181,15,0	1/1:1,2:3:3.01:33,3,0	1/1:6,7:13:21.06:252,21,0	1/1:1,6:7:6.02:72,6,0	1/1:1,0:1:3.01:36,3,0
chr10	14582078	.	G	GA	2076.53	PASS	AB=1.000;AC=33;AF=0.611;AN=54;BaseQRankSum=-4.065;DP=431;FS=0.000;HRun=9;HaplotypeScore=58.3805;InbreedingCoeff=0.5776;MQ=44.18;MQ0=87;MQRankSum=-0.716;QD=7.09;ReadPosRankSum=0.635;VQSLOD=0.7072;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:13:26.85:0,27,232	1/1:1,6:6:15.04:164,15,0	0/0:23,0:3:2.67:0,3,11	0/1:29,0:11:8.31:8,0,56	1/1:5,17:21:12.03:131,12,0	0/1:19,0:11:12.59:13,0,66	0/0:19,0:9:14.97:0,15,127	1/1:7,8:11:13.86:137,14,0	1/1:7,8:12:6.02:66,6,0	1/1:10,7:15:21.06:232,21,0	1/1:9,7:15:12.03:133,12,0	0/0:9,0:7:2.97:0,3,26	0/0:7,0:6:11.98:0,12,100	0/1:16,0:11:16.31:16,0,37	1/1:3,9:9:3.01:33,3,0	1/1:12,1:12:6.47:58,6,0	1/1:5,19:16:18.05:199,18,0	1/1:4,13:11:14.87:146,15,0	1/1:5,6:8:14.98:141,15,0	1/1:2,16:17:30.04:318,30,0	./.	0/0:11,0:10:5.87:0,6,48	0/0:13,0:12:6.16:0,6,73	0/0:11,0:7:10.66:0,11,61	0/0:19,0:19:7.45:0,7,205	1/1:5,12:14:24.04:249,24,0	1/1:6,9:10:6.02:66,6,0	1/1:3,6:8:15:153,15,0
chr10	14583560	.	G	GTGTC	19775.83	PASS	AB=0.592;AC=30;AF=0.536;AN=56;BaseQRankSum=-16.053;DP=771;FS=5.772;HRun=0;HaplotypeScore=121.6378;InbreedingCoeff=0.8487;MQ=73.04;MQ0=1;MQRankSum=0.133;QD=42.71;ReadPosRankSum=-0.264;VQSLOD=4.6462;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:68,0:68:99:0,153,2410	0/1:3,6:9:27.72:416,0,28	0/0:20,0:17:9.03:0,9,145	0/0:33,0:29:26.72:0,27,352	1/1:4,19:25:48.16:1165,48,0	0/0:29,0:28:63.21:0,63,1008	0/0:19,0:18:30.10:0,30,470	1/1:29,11:40:50.91:943,51,0	1/1:5,14:19:36.12:871,36,0	1/1:11,22:34:69.22:1596,69,0	1/1:7,15:22:45.15:1075,45,0	0/0:17,0:17:39.08:0,39,602	0/0:16,0:16:36.12:0,36,585	0/0:14,0:14:33.11:0,33,533	1/1:7,20:27:57.20:1384,57,0	1/1:5,16:21:36.12:874,36,0	0/1:11,26:38:19.32:1669,0,19	1/1:7,13:21:33.11:801,33,0	1/1:20,14:32:51.13:1109,51,0	1/1:5,29:35:81.28:1947,81,0	1/1:16,37:56:84.29:2010,84,0	0/0:26,0:27:48.12:0,48,686	0/0:18,0:18:45.15:0,45,728	0/0:35,0:35:55.68:0,56,1002	0/0:11,0:11:30.07:0,30,438	1/1:10,23:36:81.22:1735,81,0	1/1:5,24:29:63.22:1527,63,0	1/1:5,10:15:27.09:655,27,0
chr10	14583837	.	C	CT	1984.22	PASS	AB=0.775;AC=20;AF=0.357;AN=56;BaseQRankSum=-5.242;DP=660;FS=0.000;HRun=12;HaplotypeScore=83.4559;InbreedingCoeff=0.1523;MQ=60.18;MQ0=0;MQRankSum=2.805;QD=5.77;ReadPosRankSum=-1.850;VQSLOD=1.8772;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:20,34:53:16.95:424,0,17	0/0:9,0:9:23.82:0,24,174	1/1:15,0:11:2.22:8,2,0	0/0:12,0:7:2.69:0,3,22	0/0:32,0:32:35.28:0,35,259	0/0:17,1:19:13.64:0,14,245	0/0:19,1:27:19.74:0,20,260	0/1:22,3:26:43.82:44,0,203	0/0:19,0:19:6.49:0,6,208	0/1:26,2:28:4.83:5,0,240	0/0:26,1:28:23.44:0,23,313	1/1:7,8:16:16.81:189,17,0	0/1:7,8:15:7.09:86,0,7	0/1:11,15:26:35.79:150,0,36	0/1:9,2:12:29.47:29,0,130	0/0:13,1:17:7.63:0,8,201	0/0:42,1:45:40.86:0,41,587	0/0:31,0:34:65.64:0,66,451	0/1:15,5:17:22.74:23,0,111	0/0:23,0:24:13.33:0,13,221	0/1:11,1:14:16.20:16,0,57	1/1:10,13:23:44.99:412,45,0	1/1:8,17:26:13.93:273,14,0	0/1:16,26:44:88.51:375,0,89	1/1:7,10:18:8.17:109,8,0	0/0:23,0:23:32.65:0,33,232	0/0:25,0:27:11.49:0,11,190	0/1:3,1:5:18.16:18,0,39
chr10	14585039	.	G	GA	643.54	PASS	AB=0.817;AC=34;AF=0.895;AN=38;BaseQRankSum=-3.923;DP=51;FS=0.000;HRun=0;HaplotypeScore=15.5667;InbreedingCoeff=-0.0839;MQ=143.54;MQ0=0;MQRankSum=-3.354;QD=13.69;ReadPosRankSum=-3.435;VQSLOD=2.7116;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,0:3:3.01:44,3,0	1/1:1,0:1:3:26,3,0	0/1:10,2:10:25.92:26,0,62	0/1:5,2:6:7.41:33,0,7	./.	1/1:1,0:1:3:25,3,0	1/1:0,1:1:3.01:45,3,0	1/1:2,0:2:6.02:92,6,0	1/1:2,0:2:3:25,3,0	./.	1/1:0,2:2:3.01:33,3,0	1/1:3,0:3:6.02:72,6,0	./.	1/1:1,0:1:3:25,3,0	1/1:0,1:1:3.01:45,3,0	./.	./.	0/0:1,0:1:2.88:0,3,15	./.	1/1:0,3:3:3.01:45,3,0	1/1:1,0:1:3.01:39,3,0	1/1:2,0:2:5.97:46,6,0	1/1:1,2:3:3.01:45,3,0	./.	1/1:1,0:1:3:26,3,0	1/1:1,0:1:3.01:46,3,0	./.	./.
chr10	14587161	.	T	TCACACACACA	8552.41	PASS	AB=0.730;AC=45;AF=0.938;AN=48;BaseQRankSum=-2.987;DP=603;FS=0.000;HRun=0;HaplotypeScore=195.0693;InbreedingCoeff=0.0341;MQ=54.62;MQ0=9;MQRankSum=-0.519;QD=16.90;ReadPosRankSum=0.925;VQSLOD=3.2578;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:42,0:41:8.89:119,9,0	./.	./.	./.	./.	1/1:22,0:22:6.35:70,6,0	1/1:27,1:33:6.96:267,7,0	1/1:22,0:20:20.42:492,20,0	1/1:16,5:21:12.04:519,12,0	1/1:25,0:25:31.79:693,32,0	0/0:12,1:13:0.47:0,0,1	1/1:14,0:18:2.78:90,3,0	1/1:12,1:18:14.98:530,15,0	1/1:10,4:14:8.61:444,9,0	1/1:16,1:19:14.97:396,15,0	1/1:11,5:18:18.06:679,18,0	0/1:17,4:27:38.73:663,0,39	1/1:13,5:19:12.93:519,13,0	1/1:11,0:13:15.01:415,15,0	1/1:11,2:14:2.72:148,3,0	1/1:40,0:41:24.02:405,24,0	1/1:25,3:29:2.91:148,3,0	1/1:10,0:14:2.81:94,3,0	1/1:17,5:23:1.10:144,1,0	1/1:12,0:15:6.02:165,6,0	1/1:23,0:23:31.66:719,32,0	1/1:13,3:19:22.42:739,22,0	1/1:15,0:15:3.01:94,3,0
chr10	14587774	.	A	AT	84.19	PASS	AB=0.838;AC=6;AF=0.107;AN=56;BaseQRankSum=6.008;DP=370;FS=44.592;HRun=0;HaplotypeScore=61.9523;InbreedingCoeff=-0.1313;MQ=61.83;MQ0=11;MQRankSum=-4.303;QD=1.24;ReadPosRankSum=-2.085;VQSLOD=-0.1346;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:17,4:21:16.11:0,16,511	0/0:4,0:4:12.04:0,12,167	0/0:39,0:13:30.06:0,30,365	0/0:53,0:18:21.24:0,21,309	0/0:13,0:12:33.10:0,33,446	0/0:9,0:9:21:0,21,269	0/0:12,1:11:23.97:0,24,289	0/0:23,0:23:66.20:0,66,880	0/0:5,2:7:14.91:0,15,209	0/1:15,2:17:49.96:50,0,500	0/0:10,0:10:27.09:0,27,378	0/1:3,1:4:35.93:41,0,36	0/0:4,1:5:12.03:0,12,153	0/0:4,0:4:9.03:0,9,126	0/1:6,3:9:3.16:3,0,166	0/0:3,0:2:3.01:0,3,42	0/0:17,1:18:38.80:0,39,514	0/0:6,0:6:12.86:0,13,146	0/0:6,0:6:18.04:0,18,233	0/0:7,1:8:21.07:0,21,293	0/0:18,2:20:48.14:0,48,638	0/0:10,0:10:27.09:0,27,378	0/1:8,2:10:26.17:26,0,209	0/0:16,0:16:45.07:0,45,587	0/0:7,1:8:20.88:0,21,223	0/1:12,2:14:50.60:51,0,439	0/1:12,2:13:31.83:32,0,439	0/0:6,0:5:9.03:0,9,126
chr10	14590113	.	G	GAAAC	9297.84	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-11.580;DP=631;FS=7.043;HRun=0;HaplotypeScore=98.0255;InbreedingCoeff=0.9938;MQ=65.13;MQ0=2;MQRankSum=0.511;QD=38.11;ReadPosRankSum=3.543;VQSLOD=4.9536;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:18,24:42:89:1972,89,0	0/0:13,0:13:30:0,30,435	0/0:26,0:20:21.06:0,21,317	0/0:23,0:18:26.88:0,27,352	0/0:24,0:24:54.03:0,54,819	1/1:8,16:24:30.10:726,30,0	1/1:7,15:23:30.10:726,30,0	0/0:29,0:29:48.10:0,48,686	0/0:23,0:23:39.09:0,39,586	0/0:23,0:23:60.18:0,60,896	0/0:23,0:23:51.11:0,51,714	1/1:5,14:21:27.09:653,27,0	1/1:7,10:18:21.07:507,21,0	1/1:6,13:19:33.11:781,33,0	0/0:23,0:23:42.13:0,42,665	0/0:11,0:11:21.06:0,21,319	0/0:43,0:43:96.19:0,96,1437	0/0:9,0:9:21.07:0,21,344	0/0:22,0:20:33.01:0,33,477	0/0:25,0:25:58.44:0,58,906	0/0:26,0:26:62.78:0,63,944	1/1:8,17:25:48.16:1085,48,0	1/1:3,13:17:33.58:741,34,0	1/1:8,33:41:66.12:1598,66,0	1/1:3,10:13:21.07:509,21,0	0/0:24,0:24:51.16:0,51,810	0/0:15,0:15:26.96:0,27,413	0/0:5,0:5:15.04:0,15,221
chr10	14590202	.	TG	T	9309.65	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=-0.952;DP=541;FS=5.672;HRun=3;HaplotypeScore=86.8211;InbreedingCoeff=0.9823;MQ=105.93;MQ0=0;MQRankSum=-0.974;QD=33.49;ReadPosRankSum=4.151;VQSLOD=5.3194;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:25:69.22:0,69,949	1/1:2,8:10:21.06:252,21,0	0/0:44,0:44:99:0,132,1785	0/0:29,0:29:60.67:0,61,898	1/1:1,19:20:57.18:705,57,0	0/0:20,0:19:48.09:0,48,664	0/0:21,0:21:51.17:0,51,733	1/1:0,25:25:75.22:906,75,0	1/1:1,18:19:54.17:668,54,0	1/1:2,12:14:36.11:441,36,0	1/1:0,3:3:6.02:74,6,0	0/0:18,0:18:48.16:0,48,684	0/0:13,0:13:30.10:0,30,418	0/0:21,0:21:57.08:0,57,763	1/1:0,23:23:63.20:779,63,0	1/1:0,17:17:48.15:594,48,0	1/1:1,27:28:66.21:817,66,0	1/1:0,21:21:63.20:780,63,0	1/1:1,16:17:51.16:631,51,0	1/1:0,9:9:27.02:315,27,0	1/1:1,19:20:48.11:577,48,0	0/0:15,0:15:39.05:0,39,512	0/0:11,0:11:29.62:0,30,292	0/0:29,0:29:75.12:0,75,1028	0/0:15,0:15:45.03:0,45,589	1/1:1,20:21:60.17:728,60,0	1/1:1,24:25:69.21:854,69,0	1/1:0,6:6:15.05:186,15,0
chr10	14590245	.	GTGTTGTTGT	G	9369.40	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=3.849;DP=519;FS=0.860;HRun=0;HaplotypeScore=165.3803;InbreedingCoeff=0.9842;MQ=71.06;MQ0=0;MQRankSum=-14.536;QD=54.47;ReadPosRankSum=4.392;VQSLOD=4.5789;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,21:21:33.11:936,33,0	0/0:10,0:10:30.10:0,30,1260	0/0:23,0:17:14.44:0,14,631	0/0:25,0:22:36.12:0,36,1176	0/0:21,0:21:51.17:0,51,2114	1/1:7,14:20:33.11:950,33,0	1/1:3,17:20:27.09:750,27,0	0/0:34,0:34:90.29:0,90,3420	0/0:19,0:19:48.16:0,48,2060	0/0:20,0:20:57.20:0,57,2436	0/0:6,0:6:15.05:0,15,655	1/1:5,7:12:21.07:604,21,0	1/1:1,12:13:33.11:949,33,0	1/1:3,19:22:51.18:1424,51,0	0/0:24,0:24:57.20:0,57,2371	0/0:18,0:18:39.13:0,39,1743	0/0:29,0:29:66.23:0,66,2664	0/0:18,0:18:48.16:0,48,2064	0/0:19,0:19:33.11:0,33,1501	0/0:18,0:18:54.18:0,54,2371	0/0:21,0:21:39.13:0,39,1698	1/1:0,11:11:33.11:949,33,0	1/1:1,15:16:39.13:1109,39,0	1/1:6,11:17:11.54:343,12,0	1/1:0,18:18:48.16:1355,48,0	0/0:15,0:15:36.11:0,36,1417	0/0:17,0:17:39.13:0,39,1640	0/0:9,0:9:12.04:0,12,458
chr10	14590327	.	CACACAG	C	7320.53	PASS	AB=0.995;AC=50;AF=0.893;AN=56;BaseQRankSum=-4.389;DP=545;FS=17.269;HRun=0;HaplotypeScore=168.9792;InbreedingCoeff=0.0890;MQ=48.04;MQ0=11;MQRankSum=-0.533;QD=13.43;ReadPosRankSum=2.334;VQSLOD=2.9119;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:36,0:36:47.89:808,48,0	1/1:5,0:5:5.98:46,6,0	0/1:35,0:6:5.26:5,0,21	0/1:36,0:9:0.07:0,0,43	1/1:9,0:9:11.98:124,12,0	0/1:23,0:23:63.41:63,0,173	0/1:34,1:34:99:227,0,292	1/1:24,0:23:45.24:361,45,0	1/1:21,0:21:29.81:257,30,0	1/1:9,0:9:14.96:154,15,0	0/1:11,0:11:7.42:63,0,7	1/1:18,3:21:32.91:391,33,0	0/1:17,0:17:69.57:281,0,70	1/1:16,0:16:12.89:209,13,0	1/1:22,0:22:11.44:122,11,0	1/1:15,0:15:33.81:378,34,0	1/1:20,0:20:31.70:320,32,0	1/1:19,0:18:32.80:369,33,0	1/1:11,0:11:24.53:166,25,0	1/1:13,0:13:14.49:119,14,0	1/1:21,0:20:29.90:237,30,0	1/1:23,1:24:41.89:596,42,0	1/1:18,0:18:27.87:425,28,0	1/1:23,1:24:12.44:192,12,0	1/1:20,1:21:33.54:519,34,0	1/1:14,0:14:29.51:367,30,0	1/1:17,0:17:36.16:322,36,0	1/1:8,0:8:17.94:200,18,0
chr10	14590331	.	CAG	C	5873.78	PASS	AB=0.941;AC=52;AF=0.929;AN=56;BaseQRankSum=-3.355;DP=545;FS=8.623;HRun=0;HaplotypeScore=145.5102;InbreedingCoeff=0.1738;MQ=47.02;MQ0=10;MQRankSum=-0.066;QD=10.78;ReadPosRankSum=1.071;VQSLOD=4.3189;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:30,5:35:47.86:385,48,0	1/1:4,1:5:5.98:46,6,0	0/1:36,0:4:5.26:5,0,21	0/1:41,0:7:0.07:0,0,43	1/1:6,1:7:11.97:97,12,0	0/1:18,5:23:11.79:207,0,12	1/1:31,2:32:8.72:387,9,0	1/1:23,0:22:56.66:456,57,0	1/1:16,1:17:32.82:256,33,0	1/1:7,1:8:14.57:149,15,0	1/1:7,4:11:1.06:57,1,0	1/1:13,8:21:33.29:257,33,0	0/1:16,1:17:21.30:102,0,21	1/1:16,1:17:12.41:93,12,0	1/1:18,3:21:17.94:142,18,0	1/1:10,6:16:33.73:269,34,0	1/1:18,3:21:37.69:291,38,0	1/1:15,4:18:38.22:285,38,0	1/1:10,0:10:29.65:219,30,0	1/1:9,3:12:17.01:142,17,0	1/1:20,0:19:33.36:260,33,0	1/1:21,5:26:44.75:353,45,0	1/1:13,3:16:24.37:186,24,0	1/1:20,7:27:16.48:121,16,0	1/1:18,6:24:42.81:358,43,0	1/1:12,4:16:35.71:315,36,0	1/1:13,3:16:38.67:291,39,0	1/1:5,2:7:17.92:146,18,0
chr10	14590341	.	CACACACACACACAG	C	4449.46	PASS	AB=1.000;AC=31;AF=0.574;AN=54;BaseQRankSum=-6.779;DP=643;FS=4.593;HRun=0;HaplotypeScore=262.4395;InbreedingCoeff=0.5114;MQ=46.75;MQ0=11;MQRankSum=-4.010;QD=12.97;ReadPosRankSum=-0.410;VQSLOD=3.1932;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:12.18:0,12,1050	1/1:6,0:6:2.97:40,3,0	0/0:41,0:6:5.93:0,6,50	./.	1/1:5,1:6:3.01:104,3,0	0/0:24,0:24:15.79:0,16,1224	0/0:33,0:32:32.56:0,33,1981	0/1:24,0:23:43.42:93,0,43	1/1:16,0:16:14.81:188,15,0	1/1:13,1:14:19.26:220,19,0	0/1:13,0:13:1.93:223,0,2	0/0:23,0:23:17.10:0,17,704	0/1:18,0:18:1.51:2,0,663	0/1:19,0:19:38.54:39,0,179	1/1:28,2:30:8.75:134,9,0	1/1:18,6:24:26.89:606,27,0	1/1:31,0:31:27.71:513,28,0	1/1:22,4:25:21.62:499,22,0	0/1:14,0:14:26.49:84,0,26	1/1:13,1:14:12.26:123,12,0	1/1:28,0:27:18.43:169,18,0	0/0:27,0:27:22.41:0,22,940	0/0:14,0:14:1.76:0,2,442	0/0:29,0:29:18.53:0,19,293	0/0:26,0:26:5.32:0,5,869	1/1:26,0:26:33.85:626,34,0	1/1:26,0:26:1.64:465,2,0	1/1:8,0:8:17.90:324,18,0
chr10	14590343	.	CACACACACACAG	C	3906.10	PASS	AB=0.979;AC=36;AF=0.643;AN=56;BaseQRankSum=-4.782;DP=646;FS=8.602;HRun=0;HaplotypeScore=249.3748;InbreedingCoeff=0.3516;MQ=46.92;MQ0=12;MQRankSum=-2.938;QD=8.62;ReadPosRankSum=-1.307;VQSLOD=0.7495;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:37,0:37:7.21:7,0,702	1/1:4,1:5:2.80:13,3,0	0/0:39,0:8:12.09:0,12,125	0/0:45,0:4:2.90:0,3,16	1/1:7,0:7:3.01:92,3,0	0/0:24,0:24:14.50:0,14,977	0/0:35,0:34:29.31:0,29,1574	0/1:26,0:25:48.37:89,0,48	1/1:16,0:16:15.35:177,15,0	1/1:14,0:14:17.53:187,18,0	0/1:12,3:15:2.44:141,0,2	0/0:22,0:22:12.71:0,13,467	0/1:17,0:17:45.73:46,0,475	0/1:17,0:17:39.81:40,0,111	1/1:28,1:29:7.20:113,7,0	1/1:24,0:24:26.93:537,27,0	1/1:28,3:31:28.65:445,29,0	1/1:26,0:25:23.23:457,23,0	1/1:14,0:14:15.22:105,15,0	1/1:12,2:14:11.81:88,12,0	1/1:27,0:26:18.37:149,18,0	0/1:27,0:27:7.36:7,0,600	0/1:15,0:15:20.19:20,0,320	0/1:30,0:30:0.35:0,0,163	0/0:27,0:27:6.82:0,7,639	1/1:22,4:26:32.95:507,33,0	1/1:23,3:26:38.69:414,39,0	1/1:8,2:10:18.40:272,18,0
chr10	14590353	.	CAG	C	7148.22	PASS	AB=0.923;AC=50;AF=0.893;AN=56;BaseQRankSum=-1.856;DP=656;FS=2.391;HRun=0;HaplotypeScore=167.7937;InbreedingCoeff=0.0491;MQ=48.27;MQ0=10;MQRankSum=-1.034;QD=10.90;ReadPosRankSum=-1.667;VQSLOD=4.1108;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:36,2:38:37.40:423,37,0	1/1:6,0:6:11.91:92,12,0	0/1:36,0:12:0.48:0,0,150	0/1:39,0:6:16.17:16,0,27	1/1:1,12:13:3:27,3,0	0/1:26,1:27:4.33:233,0,4	0/1:33,0:32:1.04:297,0,1	1/1:26,0:25:70.30:520,70,0	1/1:18,0:18:29.78:224,30,0	1/1:1,17:18:44.50:356,45,0	0/1:4,12:16:2.13:47,0,2	1/1:16,7:23:19.19:238,19,0	0/1:15,0:15:41.10:91,0,41	1/1:14,1:15:16.19:106,16,0	1/1:3,25:28:8.87:61,9,0	1/1:23,0:23:47.76:378,48,0	1/1:33,0:33:66.25:487,66,0	1/1:26,0:26:59.55:449,60,0	1/1:12,0:11:29.55:203,30,0	1/1:12,0:12:20.05:136,20,0	1/1:32,0:31:53.87:436,54,0	1/1:20,5:25:45.19:351,45,0	1/1:12,3:15:4.24:173,4,0	1/1:29,4:33:9.23:191,9,0	1/1:21,5:26:43.65:379,44,0	1/1:4,23:27:59.55:495,60,0	1/1:26,0:26:56.60:429,57,0	1/1:14,0:14:38.85:309,39,0
chr10	14591054	.	CT	C	6238.85	PASS	AB=0.918;AC=34;AF=0.607;AN=56;BaseQRankSum=-7.169;DP=593;FS=11.139;HRun=10;HaplotypeScore=88.9867;InbreedingCoeff=0.8840;MQ=67.71;MQ0=2;MQRankSum=1.883;QD=17.48;ReadPosRankSum=0.790;VQSLOD=4.5990;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:48:99:0,99,507	1/1:2,6:8:17.99:156,18,0	0/0:18,0:15:21.75:0,22,244	0/1:15,1:13:2.79:3,0,162	1/1:1,22:23:62.98:546,63,0	0/0:22,0:22:51.14:0,51,564	0/1:15,2:17:6.99:7,0,383	1/1:10,23:33:65.86:572,66,0	1/1:2,7:9:20.98:182,21,0	1/1:9,17:26:53.84:454,54,0	1/1:1,10:11:26.99:234,27,0	0/0:4,0:18:31.28:0,31,156	0/0:4,0:23:45.58:0,46,234	0/0:2,0:21:48.29:0,48,241	1/1:3,13:15:26.98:234,27,0	1/1:3,26:29:65.98:573,66,0	1/1:5,29:34:68.98:598,69,0	1/1:3,19:22:50.98:443,51,0	1/1:6,25:31:71.97:625,72,0	1/1:1,6:7:18:156,18,0	1/1:1,13:14:32.99:287,33,0	0/0:9,0:24:49.98:0,50,274	0/0:5,0:16:23.05:0,23,151	0/0:3,0:32:59.49:0,59,298	0/0:2,0:11:25.60:0,26,128	1/1:6,20:26:59.96:517,60,0	1/1:4,21:25:56.98:494,57,0	1/1:3,7:10:18:156,18,0
chr10	14591162	.	TTGTGTG	T	1937.05	PASS	AB=0.652;AC=20;AF=0.370;AN=54;BaseQRankSum=6.603;DP=508;FS=7.036;HRun=0;HaplotypeScore=119.4817;InbreedingCoeff=0.6634;MQ=68.72;MQ0=9;MQRankSum=-5.843;QD=10.41;ReadPosRankSum=0.897;VQSLOD=2.2115;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:22,6:29:15.93:309,16,0	0/0:3,0:5:6.02:0,6,136	./.	0/0:27,0:16:3.01:0,3,59	0/0:8,0:13:18.06:0,18,260	1/1:5,2:14:10.45:132,10,0	0/1:9,1:21:57.50:58,0,61	0/0:31,0:32:24.08:0,24,577	0/0:10,0:11:11.22:0,11,214	0/0:20,0:19:21.07:0,21,640	0/0:6,0:7:6.02:0,6,136	1/1:12,4:15:9.03:178,9,0	1/1:9,6:15:15.02:267,15,0	1/1:8,2:12:9.03:165,9,0	0/0:14,0:19:21.07:0,21,306	0/1:8,0:16:14.81:15,0,298	0/0:27,1:32:1.64:0,2,1346	0/0:13,0:20:33.07:0,33,438	0/0:18,0:19:19.47:0,19,546	0/0:13,0:15:14.25:0,14,369	0/0:23,0:26:31.48:0,31,799	1/1:5,4:9:3.01:62,3,0	1/1:6,9:17:21.37:370,21,0	1/1:15,4:19:8.66:143,9,0	1/1:9,9:18:21.07:431,21,0	0/0:18,0:18:39.08:0,39,993	0/0:13,0:16:29.28:0,29,877	0/0:5,0:5:6.02:0,6,189
chr10	14591430	.	GA	G	8717.69	PASS	AB=0.748;AC=52;AF=0.929;AN=56;BaseQRankSum=0.768;DP=516;FS=18.331;HRun=10;HaplotypeScore=88.2230;InbreedingCoeff=0.4173;MQ=60.41;MQ0=2;MQRankSum=-0.215;QD=17.09;ReadPosRankSum=3.422;VQSLOD=3.9580;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,41:46:73.43:781,73,0	1/1:2,10:11:23.99:208,24,0	0/0:6,0:5:9.02:0,9,100	0/1:10,1:8:7.63:8,0,133	1/1:2,12:14:38.99:338,39,0	1/1:1,8:9:20.99:182,21,0	1/1:6,20:26:41.96:365,42,0	1/1:3,27:27:35.83:538,36,0	1/1:2,14:16:26.99:234,27,0	1/1:2,15:17:41.93:355,42,0	1/1:0,8:8:14.98:128,15,0	1/1:5,15:20:31.70:284,32,0	1/1:1,17:18:35.98:313,36,0	1/1:3,16:19:41.98:364,42,0	1/1:1,13:14:26.98:234,27,0	1/1:1,10:10:23.99:208,24,0	1/1:4,26:30:65.97:573,66,0	1/1:3,19:22:31.20:397,31,0	1/1:3,19:21:50.99:441,51,0	1/1:3,11:13:23.97:208,24,0	1/1:3,29:32:74.97:651,75,0	1/1:2,13:15:32.99:286,33,0	0/1:3,8:11:15.40:112,0,15	1/1:2,29:31:65.94:572,66,0	1/1:2,4:6:5.99:52,6,0	1/1:2,18:20:50.99:442,51,0	1/1:4,23:27:44.85:391,45,0	1/1:1,7:8:5.99:52,6,0
chr10	14597619	.	GATGA	G	14398.11	PASS	AB=0.667;AC=51;AF=0.911;AN=56;BaseQRankSum=-1.045;DP=745;FS=13.004;HRun=0;HaplotypeScore=102.3508;InbreedingCoeff=0.6972;MQ=54.70;MQ0=32;MQRankSum=5.013;QD=20.99;ReadPosRankSum=2.891;VQSLOD=3.9536;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:18,26:43:36.12:585,36,0	1/1:2,7:9:15.05:249,15,0	0/0:32,0:7:9.02:0,9,283	0/0:27,0:8:24.07:0,24,518	1/1:7,11:17:18.06:298,18,0	1/1:15,9:22:42.12:660,42,0	0/1:12,12:24:99:128,0,185	1/1:21,21:34:54.09:673,54,0	1/1:8,14:22:27.09:447,27,0	1/1:16,28:42:84.19:1251,84,0	1/1:9,16:25:33.11:528,33,0	1/1:4,28:30:39.13:646,39,0	1/1:6,21:26:48.16:795,48,0	1/1:7,20:26:27.09:447,27,0	1/1:7,28:35:48.16:795,48,0	1/1:6,28:33:48.16:796,48,0	1/1:3,11:14:6.02:99,6,0	1/1:6,15:20:16.92:283,17,0	1/1:5,7:10:18.05:262,18,0	1/1:3,21:24:45.11:680,45,0	1/1:9,31:39:39.13:646,39,0	1/1:10,18:26:30.10:497,30,0	1/1:4,17:21:27.09:448,27,0	1/1:8,26:34:54.18:876,54,0	1/1:3,10:13:18.06:298,18,0	1/1:12,22:34:60.17:917,60,0	1/1:3,21:23:45.15:746,45,0	1/1:6,8:14:21.07:348,21,0
chr10	14597747	.	G	GATGA	1053.14	PASS	AB=0.629;AC=3;AF=0.054;AN=56;BaseQRankSum=-4.254;DP=956;FS=0.000;HRun=0;HaplotypeScore=195.1788;InbreedingCoeff=0.6375;MQ=58.57;MQ0=2;MQRankSum=-1.786;QD=21.06;ReadPosRankSum=-3.708;VQSLOD=2.4398;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:69.62:0,70,1023	0/0:20,0:20:48.11:0,48,690	0/0:35,0:25:59.43:0,59,763	0/0:24,0:15:26.73:0,27,407	0/0:41,0:41:99:0,108,1557	0/1:16,22:37:99:764,0,141	1/1:2,8:11:18.02:393,18,0	0/0:43,0:43:78.23:0,78,1227	0/0:34,0:34:93.22:0,93,1338	0/0:54,0:54:99:0,129,1794	0/0:25,0:24:66.18:0,66,982	0/0:35,0:35:93.22:0,93,1310	0/0:33,0:33:78.24:0,78,1208	0/0:45,0:45:99:0,102,1528	0/0:45,0:45:99:0,105,1631	0/0:38,0:36:90.25:0,90,1350	0/0:19,0:19:54.18:0,54,881	0/0:24,0:23:19.73:0,20,738	0/0:17,0:17:42.08:0,42,605	0/0:36,0:36:87.27:0,87,1364	0/0:37,0:34:84.25:0,84,1337	0/0:40,0:40:99:0,105,1588	0/0:48,0:46:99:0,99,1485	0/0:31,0:31:66.06:0,66,1073	0/0:43,0:43:99:0,120,1791	0/0:43,0:43:99:0,102,1592	0/0:37,0:37:99:0,102,1520	0/0:26,0:26:75.18:0,75,1086
chr10	14598521	.	C	CAAA	658.07	PASS	AB=0.931;AC=22;AF=0.423;AN=52;BaseQRankSum=-0.214;DP=342;FS=3.247;HRun=0;HaplotypeScore=41.5036;InbreedingCoeff=0.4065;MQ=32.40;MQ0=149;MQRankSum=0.415;QD=3.99;ReadPosRankSum=-1.343;VQSLOD=1.3264;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:6:12.04:0,12,192	1/1:2,1:1:3.01:43,3,0	./.	./.	1/1:6,0:6:2.94:21,3,0	0/0:16,0:12:29.98:0,30,487	0/0:18,0:13:21:0,21,284	1/1:10,0:5:4.84:56,5,0	1/1:9,0:7:8.32:77,8,0	0/1:9,1:9:3.23:70,0,3	1/1:2,0:2:0.47:1,0,0	0/0:10,0:7:21.07:0,21,343	0/0:12,0:6:14.77:0,15,158	0/0:12,0:3:3.01:0,3,36	1/1:9,0:7:11.64:70,12,0	1/1:9,1:6:13.26:129,13,0	0/1:19,2:8:11.03:91,0,11	0/1:18,0:4:0.03:0,0,1	1/1:13,0:6:4.01:15,4,0	0/0:8,0:3:0.35:0,0,1	0/0:11,0:5:2.08:0,2,7	0/0:5,0:4:9.03:0,9,138	0/0:7,0:1:2.94:0,3,18	0/0:16,0:10:17.86:0,18,183	0/1:7,0:2:0:0,0,0	0/1:12,1:15:25.76:191,0,26	0/1:20,0:11:3.48:44,0,3	0/0:21,0:11:2.98:0,3,7
chr10	14598617	.	TTTCCTTCC	T	1755.91	PASS	AC=14;AF=0.304;AN=46;BaseQRankSum=0.554;DP=348;FS=15.194;HRun=0;HaplotypeScore=83.8822;InbreedingCoeff=0.7772;MQ=63.36;MQ0=14;MQRankSum=-4.799;QD=16.57;ReadPosRankSum=1.162;VQSLOD=1.3514;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:15,13:26:12.04:293,12,0	0/0:5,0:4:6.01:0,6,146	./.	./.	./.	0/0:8,0:15:18.06:0,18,561	0/0:27,0:27:45.12:0,45,943	0/0:17,0:12:3.01:0,3,42	0/0:8,0:7:12.04:0,12,274	0/0:10,0:9:5.98:0,6,142	0/0:7,0:7:9.03:0,9,157	1/1:5,14:18:17.99:392,18,0	1/1:2,8:10:17.13:441,17,0	1/1:5,8:12:12.04:295,12,0	0/0:11,0:10:17.98:0,18,323	0/0:9,0:15:15.05:0,15,543	0/0:13,0:13:27.09:0,27,725	0/0:10,0:10:15.02:0,15,225	0/0:9,0:9:12.93:0,13,289	./.	0/0:17,0:16:9.03:0,9,207	1/1:6,0:6:3.01:57,3,0	0/0:4,5:8:0.47:0,0,1	1/1:7,14:21:9.03:218,9,0	1/1:5,4:9:9.03:224,9,0	0/0:11,0:10:18.05:0,18,431	0/0:3,0:6:12.04:0,12,434	./.
chr10	14600136	.	ATGAGT	A	9757.27	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=18.092;DP=623;FS=8.294;HRun=0;HaplotypeScore=166.8420;InbreedingCoeff=0.9987;MQ=88.24;MQ0=0;MQRankSum=-17.001;QD=45.81;ReadPosRankSum=-0.012;VQSLOD=4.5379;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,21:31:60.19:1091,60,0	0/0:11,0:11:33.08:0,33,984	0/0:27,0:27:75.25:0,75,2204	0/0:27,0:27:62.58:0,63,1783	0/0:22,0:22:66.23:0,66,2086	1/1:2,19:21:57.20:1087,57,0	1/1:9,13:21:45.14:813,45,0	0/0:20,0:20:60.19:0,60,1654	0/0:28,0:28:78.27:0,78,2520	0/0:31,0:30:93.32:0,93,2982	0/0:16,0:16:48.15:0,48,1478	1/1:1,20:21:60.21:1129,60,0	1/1:6,16:22:60.17:1042,60,0	1/1:5,14:19:45.14:814,45,0	0/0:24,0:24:72.25:0,72,2282	0/0:19,0:19:57.20:0,57,1796	0/0:26,0:26:75.24:0,75,2294	0/0:22,0:22:66.23:0,66,2050	0/0:16,0:16:39.13:0,39,1148	0/0:13,0:13:39.13:0,39,1244	0/0:39,0:39:99:0,117,3602	1/1:0,22:22:66.23:1243,66,0	1/1:3,13:16:39.60:709,40,0	1/1:3,8:11:18.04:324,18,0	1/1:3,25:28:81.28:1505,81,0	0/0:34,0:34:99:0,99,3040	0/0:19,0:19:57.20:0,57,1800	0/0:16,0:16:48.16:0,48,1483
chr10	14600144	.	T	TC	6657.36	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=18.829;DP=598;FS=12.481;HRun=1;HaplotypeScore=125.6771;InbreedingCoeff=0.9987;MQ=89.95;MQ0=0;MQRankSum=-17.626;QD=34.86;ReadPosRankSum=0.488;VQSLOD=3.0595;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,25:25:57.18:751,57,0	0/0:12,0:12:36.12:0,36,501	0/0:32,0:32:96.32:0,96,1334	0/0:22,0:23:64.06:0,64,838	0/0:22,0:22:63.21:0,63,879	1/1:0,20:20:57.18:736,57,0	1/1:2,13:15:45.13:551,45,0	0/0:16,0:16:48.15:0,48,655	0/0:28,0:28:84.28:0,84,1175	0/0:34,0:33:99:0,99,1383	0/0:19,0:19:54.17:0,54,735	1/1:2,20:22:63.20:807,63,0	1/1:1,16:18:51.16:636,51,0	1/1:0,16:16:42.13:536,42,0	0/0:23,0:23:69.23:0,69,965	0/0:21,0:21:63.21:0,63,878	0/0:24,0:24:72.20:0,72,985	0/0:21,0:21:63.18:0,63,845	0/0:11,0:11:33.11:0,33,460	0/0:16,0:16:48.15:0,48,651	0/0:37,0:37:99:0,111,1500	1/1:0,25:25:69.22:869,69,0	1/1:0,14:14:42.14:563,42,0	1/1:1,8:9:17.85:230,18,0	1/1:0,27:27:78.22:979,78,0	0/0:32,0:32:93.31:0,93,1301	0/0:21,0:21:63.20:0,63,864	0/0:15,0:15:45.15:0,45,629
chr10	14600864	.	G	GTTT	7050.22	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=-1.821;DP=530;FS=38.786;HRun=11;HaplotypeScore=83.6735;InbreedingCoeff=0.9265;MQ=70.43;MQ0=1;MQRankSum=-5.118;QD=25.18;ReadPosRankSum=-4.859;VQSLOD=-0.3021;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:43:99:0,108,1226	1/1:1,2:4:6.02:113,6,0	0/0:16,0:15:1.52:0,2,69	0/0:13,0:11:16.83:0,17,146	1/1:3,4:9:19.57:274,20,0	0/0:23,0:23:59.51:0,60,645	0/0:19,0:19:45.06:0,45,511	1/1:8,11:21:37.33:453,37,0	1/1:3,12:16:27.07:452,27,0	1/1:7,11:18:42.03:590,42,0	1/1:2,4:7:21.03:316,21,0	0/0:13,0:12:27.04:0,27,315	0/0:20,0:20:48.09:0,48,556	0/0:17,0:18:40.59:0,41,460	1/1:4,11:17:21.03:309,21,0	1/1:5,10:15:12.02:192,12,0	1/1:11,19:36:44.35:737,44,0	1/1:5,9:17:12.04:212,12,0	1/1:22,8:32:66:971,66,0	1/1:3,4:7:9.03:169,9,0	1/1:7,14:22:38.97:583,39,0	0/0:12,0:14:12.70:0,13,186	0/0:10,0:10:14.94:0,15,175	0/0:39,0:41:99:0,106,1210	0/0:17,0:17:29.98:0,30,351	1/1:10,15:28:61.02:935,61,0	1/1:6,12:19:32.83:547,33,0	1/1:5,0:10:15.01:196,15,0
chr10	14601082	.	CTCT	C	438.39	PASS	AB=0.995;AC=17;AF=0.327;AN=52;BaseQRankSum=-1.188;DP=884;FS=3.724;HRun=0;HaplotypeScore=111.4030;InbreedingCoeff=-0.2275;MQ=20.91;MQ0=305;MQRankSum=-2.121;QD=0.89;ReadPosRankSum=-6.038;VQSLOD=-0.2805;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:27:5.78:0,6,356	1/1:11,0:7:1.55:4,2,0	./.	./.	0/0:20,0:8:4.10:0,4,36	0/0:42,0:21:17.16:0,17,299	0/1:56,0:28:23.85:24,0,170	1/1:12,8:9:0.82:65,1,0	0/1:22,0:9:8.31:8,0,43	0/1:46,0:16:40.09:40,0,91	0/1:25,0:11:1.09:30,0,1	0/0:37,0:18:9.03:0,9,142	0/0:25,0:11:20.23:0,20,159	0/0:35,0:15:12.46:0,12,160	0/1:36,0:15:10.18:25,0,10	0/1:28,1:18:81.90:105,0,82	0/1:34,0:12:14.71:15,0,85	0/0:28,0:11:9.03:0,9,125	0/1:28,0:12:47.27:47,0,89	0/1:28,0:19:36.59:37,0,43	0/0:43,0:15:21.12:0,21,243	0/1:33,0:13:2.09:2,0,68	0/1:31,0:16:35.54:36,0,43	0/0:48,0:24:15.10:0,15,184	0/0:33,0:23:3.49:0,3,264	0/1:62,0:33:99:104,0,203	0/1:30,1:17:36.85:37,0,137	0/0:26,0:9:3.73:0,4,43
chr10	14601109	.	TTCC	T	230.50	PASS	AB=0.969;AC=9;AF=0.173;AN=52;BaseQRankSum=0.015;DP=812;FS=30.222;HRun=0;HaplotypeScore=128.4876;InbreedingCoeff=-0.0701;MQ=23.21;MQ0=256;MQRankSum=-2.435;QD=0.99;ReadPosRankSum=-1.690;VQSLOD=0.7997;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:31:14.68:0,15,538	0/0:10,1:6:3.01:0,3,34	./.	./.	0/0:19,2:11:5.23:0,5,41	0/0:43,0:28:9.30:0,9,644	0/0:64,0:37:16.27:0,16,591	0/1:31,1:9:11.28:36,0,11	0/0:23,0:13:3.47:0,3,56	0/1:39,2:19:99:103,0,141	1/1:15,3:8:5.84:61,6,0	0/0:25,0:14:3.76:0,4,77	0/0:26,0:15:15.77:0,16,232	0/0:31,0:18:8.83:0,9,244	0/1:31,1:16:24.74:25,0,82	0/1:21,1:16:78.76:79,0,101	0/0:27,0:11:12.16:0,12,87	0/0:19,1:9:6.02:0,6,100	0/1:32,0:18:4.91:5,0,112	0/1:26,1:16:27.50:27,0,158	0/0:40,0:14:0.76:0,1,59	0/0:26,0:17:24.22:0,24,294	0/0:24,0:14:9.34:0,9,108	0/0:42,0:25:17.92:0,18,176	0/0:29,0:19:30.01:0,30,374	0/0:53,0:27:10.27:0,10,267	0/1:28,1:16:24.41:24,0,157	0/0:19,0:11:20.42:0,20,149
chr10	14601124	.	T	TTCC	2151.59	PASS	AB=0.997;AC=25;AF=0.481;AN=52;BaseQRankSum=-3.758;DP=702;FS=11.027;HRun=0;HaplotypeScore=107.6057;InbreedingCoeff=-0.0258;MQ=24.60;MQ0=205;MQRankSum=3.615;QD=4.07;ReadPosRankSum=-4.084;VQSLOD=0.0484;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:39,2:30:99:229,0,132	0/0:11,0:6:2.97:0,3,20	./.	./.	0/1:17,0:7:2.09:23,0,2	0/1:35,0:25:99:140,0,179	0/1:58,0:31:99:128,0,136	0/1:27,0:5:0:0,0,0	0/1:21,0:11:3:3,0,80	0/1:33,0:15:14.22:14,0,144	0/0:12,0:6:5.42:0,5,22	1/1:21,1:13:9.85:111,10,0	0/1:19,0:13:0.93:233,0,1	1/1:24,2:17:10.07:286,10,0	0/0:28,0:16:13.20:0,13,178	0/1:20,0:13:6.56:7,0,65	1/1:21,0:10:6.83:50,7,0	0/0:20,0:10:0.82:0,1,42	0/1:25,0:12:19.09:19,0,39	0/1:29,0:17:24.59:25,0,116	0/0:32,0:11:2.12:0,2,34	1/1:19,3:16:24.43:318,24,0	1/1:18,2:12:14.98:175,15,0	0/1:31,0:19:32.27:96,0,32	1/1:24,4:19:21.84:421,22,0	0/0:47,0:22:0.70:0,1,314	0/1:29,0:16:26.84:27,0,38	0/0:17,0:10:9.99:0,10,159
chr10	14601139	.	TTCC	T	1033.57	PASS	AB=0.952;AC=15;AF=0.278;AN=54;BaseQRankSum=-0.564;DP=656;FS=40.087;HRun=0;HaplotypeScore=96.8746;InbreedingCoeff=-0.0845;MQ=27.91;MQ0=179;MQRankSum=1.298;QD=3.33;ReadPosRankSum=-0.591;VQSLOD=0.1985;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:32:17.81:0,18,598	./.	0/0:17,0:2:6.02:0,6,93	0/0:16,0:8:18.03:0,18,283	0/0:15,0:5:2.10:0,2,7	0/0:30,0:23:34.41:0,34,367	0/0:52,0:30:32.76:0,33,434	0/1:24,1:6:32.41:32,0,100	0/1:20,0:10:31.22:41,0,31	0/1:30,1:14:96.19:107,0,96	1/1:13,0:10:10.75:118,11,0	0/0:18,0:10:9.02:0,9,156	0/0:14,0:10:1.63:0,2,237	0/0:20,0:15:20.39:0,20,357	0/1:21,2:16:71.56:72,0,138	0/1:12,2:8:55.90:149,0,56	1/1:23,0:14:11.49:167,11,0	0/1:13,1:7:40.94:81,0,41	0/1:24,1:11:57.26:57,0,148	0/1:26,0:15:70.88:71,0,140	0/1:32,0:11:57.80:58,0,79	0/0:23,0:18:36.75:0,37,584	0/0:21,0:15:23.09:0,23,342	0/0:24,0:12:15.05:0,15,247	0/0:27,0:17:34.97:0,35,444	0/1:36,3:21:99:199,0,218	0/1:23,2:15:41.54:42,0,82	0/0:15,0:9:14.84:0,15,184
chr10	14601568	.	TACCGA	T	7760.92	PASS	AC=28;AF=0.609;AN=46;BaseQRankSum=10.801;DP=1013;FS=20.709;HRun=0;HaplotypeScore=66.5247;InbreedingCoeff=0.8321;MQ=14.28;MQ0=766;MQRankSum=0.214;QD=16.20;ReadPosRankSum=1.454;VQSLOD=2.6309;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:101,0:3:3.01:0,3,96	1/1:2,5:5:15.05:334,15,0	./.	./.	1/1:9,19:20:45.15:942,45,0	0/0:47,0:8:21.07:0,21,652	0/0:37,0:5:15.05:0,15,482	./.	1/1:39,3:2:6.02:134,6,0	1/1:21,25:27:75.26:1671,75,0	1/1:7,9:10:24.08:534,24,0	0/0:39,0:2:6.02:0,6,191	0/0:41,0:4:12.04:0,12,383	0/0:63,0:10:30.10:0,30,964	1/1:29,7:7:18.06:401,18,0	1/1:31,3:4:9.03:201,9,0	1/1:51,1:1:3.01:67,3,0	1/1:36,2:2:6.02:134,6,0	1/1:43,1:1:3.01:67,3,0	1/1:3,24:25:48.16:1052,48,0	./.	0/0:38,0:27:81.28:0,81,2417	0/0:23,0:14:39.13:0,39,1240	./.	0/0:24,0:20:60.21:0,60,1870	1/1:32,11:12:30.06:621,30,0	1/1:30,15:14:35.91:802,36,0	1/1:8,13:13:36.12:802,36,0
chr10	14602391	.	GCTT	G	7160.92	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=12.253;DP=635;FS=5.334;HRun=0;HaplotypeScore=95.4904;InbreedingCoeff=0.9997;MQ=84.51;MQ0=0;MQRankSum=-0.873;QD=37.30;ReadPosRankSum=4.681;VQSLOD=5.6136;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,47:47:99:1950,123,0	0/0:16,0:16:48.15:0,48,978	0/0:21,0:21:54.19:0,54,1158	0/0:23,0:22:57.16:0,57,1111	0/0:30,0:30:87.28:0,87,1835	0/0:22,0:22:60.21:0,60,1311	0/0:19,0:19:51.17:0,51,1080	0/0:25,0:25:57.19:0,57,1233	0/0:20,0:20:60.21:0,60,1308	0/0:22,0:22:57.19:0,57,1247	0/0:11,0:11:30.10:0,30,649	1/1:3,16:19:39.09:590,39,0	1/1:0,15:15:42.14:665,42,0	1/1:3,16:19:42.10:638,42,0	0/0:24,0:24:66.23:0,66,1414	0/0:23,0:23:66.23:0,66,1427	0/0:30,0:30:87.30:0,87,1885	0/0:16,0:16:48.16:0,48,1020	0/0:17,0:17:51.18:0,51,1114	0/0:28,0:28:69.19:0,69,1459	0/0:29,0:29:78.25:0,78,1639	1/1:1,26:27:63.21:988,63,0	1/1:2,22:24:56.82:902,57,0	1/1:3,22:25:51.17:809,51,0	1/1:1,13:14:39.13:618,39,0	0/0:25,0:25:69.24:0,69,1505	0/0:32,0:32:90.29:0,90,1925	0/0:10,0:10:27.09:0,27,590
chr10	14603659	.	A	AGT	7371.83	PASS	AB=0.669;AC=34;AF=0.680;AN=50;BaseQRankSum=-7.498;DP=733;FS=3.369;HRun=0;HaplotypeScore=149.0830;InbreedingCoeff=-0.1303;MQ=64.52;MQ0=10;MQRankSum=0.665;QD=12.25;ReadPosRankSum=-1.170;VQSLOD=4.4436;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/1:4,6:10:18.87:169,0,19	./.	./.	0/1:11,14:24:65.64:377,0,66	0/0:3,0:16:36.99:0,37,183	0/0:10,0:29:51.13:0,51,252	1/1:32,10:42:41.12:532,41,0	0/1:12,9:22:72.51:291,0,73	0/1:24,16:40:66.07:728,0,66	0/1:10,11:22:3.93:378,0,4	1/1:19,0:23:12:105,12,0	1/1:26,0:26:11.21:82,11,0	1/1:18,0:27:3:26,3,0	0/1:8,11:20:3.82:383,0,4	1/1:2,8:11:24.08:367,24,0	0/1:11,23:35:7.79:807,0,8	0/1:10,19:26:56.60:504,0,57	0/1:16,4:21:12.89:194,0,13	0/1:11,7:17:27:209,0,27	0/1:26,28:55:86.98:800,0,87	1/1:20,0:22:8.99:78,9,0	1/1:21,0:25:2.85:26,3,0	1/1:29,0:35:9:78,9,0	1/1:21,1:25:6:52,6,0	0/1:19,13:34:48.82:586,0,49	1/1:10,11:21:26.82:412,27,0	1/1:4,6:10:12.93:185,13,0
chr10	14604212	.	C	CA	12458.02	PASS	AB=0.683;AC=30;AF=0.536;AN=56;BaseQRankSum=10.393;DP=907;FS=2.192;HRun=1;HaplotypeScore=319.5384;InbreedingCoeff=-0.5724;MQ=62.80;MQ0=0;MQRankSum=-8.055;QD=14.78;ReadPosRankSum=3.693;VQSLOD=4.3880;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:51,2:53:99:102,0,311	1/1:6,12:21:33.06:411,33,0	0/0:33,0:32:90.25:0,90,1109	0/0:31,0:30:90.22:0,90,1095	0/1:15,35:54:99:764,0,210	1/1:15,4:21:21.06:274,21,0	0/1:14,9:28:99:359,0,179	0/1:19,4:21:99:163,0,366	0/1:9,14:29:17.75:572,0,18	0/1:10,26:42:78.86:1167,0,79	0/1:8,18:30:99:526,0,165	0/1:37,5:42:99:180,0,347	0/1:23,22:45:99:696,0,412	0/1:34,2:36:79.13:79,0,159	0/1:25,5:32:5.98:281,0,6	1/1:16,7:27:5.39:430,5,0	0/1:4,9:17:50.05:228,0,50	0/1:9,11:25:20.62:532,0,21	0/1:11,12:25:99:497,0,179	0/1:7,23:31:51.98:611,0,52	1/1:11,14:31:39.02:436,39,0	0/1:32,21:53:99:646,0,600	0/1:26,17:43:99:585,0,371	0/1:12,10:22:31.86:220,0,32	0/1:24,14:38:99:572,0,341	0/1:6,21:30:99:930,0,104	0/1:9,24:32:99:840,0,219	0/1:1,9:10:8.76:355,0,9
chr10	14604214	.	G	GCACAGAGATGCCAAT	28634.44	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=0.150;DP=904;FS=4.931;HRun=0;HaplotypeScore=419.8217;InbreedingCoeff=0.9385;MQ=64.60;MQ0=0;MQRankSum=-10.299;QD=34.01;ReadPosRankSum=1.193;VQSLOD=2.5088;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:24,29:69:18.04:475,18,0	1/1:19,0:19:37.62:798,38,0	0/0:33,0:33:57.03:0,57,1302	0/0:29,0:29:60.18:0,60,1400	1/1:51,0:51:90.01:1974,90,0	1/1:10,12:26:15.14:217,15,0	1/1:25,0:25:31.69:447,32,0	1/1:20,0:19:24.07:405,24,0	1/1:27,0:27:50.34:1213,50,0	1/1:38,0:38:99:2648,105,0	1/1:28,0:28:53.67:1298,54,0	1/1:22,21:49:26.93:850,27,0	1/1:47,0:47:86.29:2480,86,0	1/1:18,13:43:8.94:238,9,0	1/1:10,15:29:12.51:433,13,0	1/1:14,11:28:35.35:637,35,0	1/1:20,0:20:23.98:409,24,0	1/1:21,0:21:29.89:630,30,0	1/1:22,0:22:50.88:993,51,0	1/1:27,0:27:60.20:1272,60,0	1/1:31,0:30:21.46:374,21,0	1/1:51,0:51:74.75:1753,75,0	1/1:41,0:41:68.90:1520,69,0	1/1:20,0:20:27.09:833,27,0	1/1:39,0:39:74.75:1898,75,0	1/1:29,0:29:77.80:2162,78,0	1/1:32,0:31:75.18:2145,75,0	1/1:10,0:10:20.75:531,21,0
chr10	14604317	.	T	TGCACAGAGATGAA	45060.08	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-5.427;DP=602;FS=81.817;HRun=0;HaplotypeScore=193.3179;InbreedingCoeff=0.9833;MQ=84.09;MQ0=1;MQRankSum=-16.311;QD=135.72;ReadPosRankSum=-0.541;VQSLOD=2.0046;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,132,5069	1/1:4,5:9:24.08:1500,24,0	0/0:23,0:23:66.21:0,66,2029	0/0:28,0:28:75.12:0,75,2597	1/1:13,13:29:63.12:3694,63,0	1/1:5,10:16:36.12:2363,36,0	1/1:18,7:29:63.13:3319,63,0	1/1:25,6:32:75.24:4195,75,0	1/1:6,7:16:39.09:2266,39,0	1/1:11,11:27:78.27:4146,78,0	1/1:9,9:20:45.15:2930,45,0	0/0:31,0:31:93.32:0,93,3566	0/0:23,0:23:66.23:0,66,2642	0/0:27,0:27:78.27:0,78,3144	1/1:4,5:12:27.01:1429,27,0	1/1:7,12:18:51.13:3156,51,0	1/1:6,6:16:33.11:2108,33,0	1/1:1,1:4:6.02:397,6,0	1/1:10,4:15:39.13:2091,39,0	1/1:4,8:13:33.11:1832,33,0	1/1:15,2:21:35.99:1843,36,0	0/0:24,0:24:66.23:0,66,2582	0/0:17,0:17:51.16:0,51,1902	0/0:26,0:26:63.22:0,63,2414	0/0:22,0:22:66.23:0,66,2511	1/1:5,15:23:69.24:4238,69,0	1/1:8,6:18:39.10:2341,39,0	1/1:3,5:11:21.03:1212,21,0
chr10	14604845	.	TA	T	1360.99	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=10.318;DP=783;FS=4.847;HRun=9;HaplotypeScore=116.7055;InbreedingCoeff=0.9982;MQ=74.01;MQ0=1;MQRankSum=-0.699;QD=21.27;ReadPosRankSum=0.065;VQSLOD=2.8986;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,120,1365	0/0:9,0:9:24.06:0,24,268	0/0:23,0:19:27.28:0,27,365	0/0:21,0:20:35.28:0,35,338	0/0:36,0:36:99:0,99,1133	1/1:3,30:33:84.04:769,84,0	1/1:3,28:31:78.04:714,78,0	0/0:25,0:25:69.18:0,69,778	0/0:22,0:22:60.17:0,60,682	0/0:40,0:40:99:0,117,1341	0/0:26,0:26:63.19:0,63,727	0/0:26,0:26:72.21:0,72,831	0/0:27,0:27:72.20:0,72,819	0/0:23,0:23:60.18:0,60,692	0/0:25,0:25:69.19:0,69,787	0/0:28,0:28:81.23:0,81,925	0/0:34,0:34:90.27:0,90,1038	0/0:27,0:27:75.18:0,75,850	0/0:23,0:23:63.19:0,63,727	0/0:43,0:43:99:0,117,1329	0/0:12,0:12:33.10:0,33,381	0/0:42,0:42:99:0,108,1233	0/0:30,0:30:87.25:0,87,998	0/0:28,0:28:84.25:0,84,969	0/0:24,0:24:66.18:0,66,752	0/0:31,0:31:78.23:0,78,900	0/0:32,0:31:84.21:0,84,938	0/0:20,0:20:60.18:0,60,692
chr10	14605425	.	CTCTG	C	9925.15	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=11.678;DP=1007;FS=7.346;HRun=0;HaplotypeScore=208.1389;InbreedingCoeff=0.9997;MQ=65.07;MQ0=0;MQRankSum=-3.544;QD=32.02;ReadPosRankSum=7.162;VQSLOD=3.7565;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:3,45:48:99:1740,102,0	0/0:10,0:10:27.09:0,27,655	0/0:45,0:41:77.16:0,77,1595	0/0:41,0:35:61.09:0,61,1092	0/0:36,0:36:93.30:0,93,2119	0/0:23,0:23:57.20:0,57,1375	0/0:31,0:31:84.29:0,84,2064	0/0:50,0:50:99:0,123,2824	0/0:41,0:41:99:0,105,2490	0/0:43,0:43:99:0,111,2678	0/0:16,0:16:42.14:0,42,1000	1/1:2,38:40:75.25:1237,75,0	1/1:5,37:42:84.29:1442,84,0	1/1:3,31:34:62.98:1079,63,0	0/0:54,0:54:99:0,141,3491	0/0:35,0:35:87.30:0,87,2152	0/0:39,0:39:96.33:0,96,2364	0/0:26,0:26:66.23:0,66,1630	0/0:26,0:26:57.20:0,57,1357	0/0:29,0:29:66.23:0,66,1565	0/0:74,0:73:99:0,196,4502	1/1:5,33:38:78.26:1315,78,0	1/1:4,25:29:60.06:990,60,0	1/1:10,43:53:93.79:1618,94,0	1/1:5,21:26:30.10:505,30,0	0/0:34,0:34:96.33:0,96,2313	0/0:30,0:30:87.28:0,87,2034	0/0:13,0:13:39.13:0,39,981
chr10	14606641	.	GA	G	2248.90	PASS	AB=0.624;AC=17;AF=0.304;AN=56;BaseQRankSum=8.225;DP=437;FS=7.073;HRun=11;HaplotypeScore=45.5709;InbreedingCoeff=0.5860;MQ=62.04;MQ0=7;MQRankSum=0.411;QD=13.07;ReadPosRankSum=4.426;VQSLOD=3.0623;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,32:35:76.94:621,77,0	0/0:4,0:4:6.02:0,6,64	0/1:11,2:5:28.93:31,0,29	0/0:14,0:5:8.19:0,8,103	0/0:19,1:20:23.38:0,23,411	1/1:4,8:12:14.97:123,15,0	1/1:4,14:17:38.95:320,39,0	0/0:25,2:28:34.23:0,34,493	0/0:13,0:13:30.08:0,30,320	0/0:19,0:19:39.09:0,39,409	0/0:12,0:12:27.05:0,27,273	1/1:1,8:10:20.02:154,20,0	1/1:2,8:10:23.96:197,24,0	0/1:2,8:10:14:105,0,14	0/0:16,0:16:31.35:0,31,351	0/0:6,0:6:15.02:0,15,152	0/0:33,1:35:68.25:0,68,878	0/0:24,0:24:47.18:0,47,600	0/0:16,0:14:19.07:0,19,330	0/0:14,1:15:14.46:0,14,359	0/0:10,0:12:20.72:0,21,188	0/1:2,10:12:8.04:148,0,8	0/1:2,10:12:8.03:148,0,8	1/1:0,17:17:38.96:320,39,0	0/1:8,15:23:7.70:275,0,8	0/0:15,0:15:39.08:0,39,405	0/0:10,0:10:21.92:0,22,217	0/0:6,0:6:18.05:0,18,192
chr10	14607426	.	T	TG	250.95	PASS	AC=22;AF=0.917;AN=24;BaseQRankSum=-2.011;DP=57;FS=0.000;HRun=1;HaplotypeScore=16.8663;InbreedingCoeff=0.1900;MQ=60.30;MQ0=5;MQRankSum=0.847;QD=7.38;ReadPosRankSum=0.423;VQSLOD=0.3641;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,1:4:2.98:22,3,0	./.	./.	0/0:8,0:4:6.89:0,7,58	1/1:1,0:1:2.68:11,3,0	1/1:1,1:2:2.98:21,3,0	./.	./.	./.	1/1:3,0:3:3:25,3,0	1/1:2,0:2:3:25,3,0	./.	./.	1/1:1,1:2:5.03:31,5,0	./.	./.	1/1:2,3:4:3.15:11,3,0	./.	./.	./.	1/1:3,3:6:14.57:96,15,0	./.	./.	1/1:4,0:4:2.98:21,3,0	./.	1/1:4,0:4:5.97:47,6,0	1/1:1,0:1:3:25,3,0	./.
chr10	14607507	.	CCA	C	212.08	PASS	AB=0.863;AC=8;AF=0.167;AN=48;BaseQRankSum=0.780;DP=378;FS=18.055;HRun=0;HaplotypeScore=97.0262;InbreedingCoeff=0.0943;MQ=41.34;MQ0=11;MQRankSum=-0.861;QD=2.83;ReadPosRankSum=0.592;VQSLOD=0.9313;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:3.87:0,4,25	0/0:5,0:5:6.02:0,6,89	./.	./.	0/0:12,0:12:3.01:0,3,45	0/0:8,0:10:9.02:0,9,112	0/0:9,0:17:14.71:0,15,148	0/0:23,0:23:8.62:0,9,88	0/1:6,2:8:26.61:27,0,39	0/0:15,0:15:3.48:0,3,43	0/0:11,1:12:12.04:0,12,161	0/0:11,0:13:2.99:0,3,23	0/0:3,0:7:3:0,3,26	./.	0/0:13,0:12:9.03:0,9,129	0/0:5,0:5:6.02:0,6,89	0/0:20,0:19:30.08:0,30,423	1/1:5,5:15:9.34:185,9,0	0/1:12,1:13:17.58:18,0,163	1/1:7,1:8:3.01:33,3,0	0/1:20,1:20:40.44:40,0,128	0/0:16,0:17:8.27:0,8,39	0/0:14,0:18:2.60:0,3,37	./.	0/0:6,0:6:0:0,0,0	0/0:14,0:14:9.02:0,9,109	0/1:7,2:10:31.71:32,0,119	0/0:6,0:6:3.01:0,3,45
chr10	14608532	.	ATG	A	24220.75	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-7.403;DP=680;FS=1.827;HRun=0;HaplotypeScore=90.2762;InbreedingCoeff=0.9630;MQ=70.06;MQ0=1;MQRankSum=-4.700;QD=36.98;ReadPosRankSum=5.771;VQSLOD=7.0426;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,49:49:99:1902,117,0	1/1:0,9:9:18.06:293,18,0	0/0:11,0:11:33.07:0,33,467	0/0:14,0:12:20.76:0,21,397	1/1:0,19:19:42.14:674,42,0	1/1:0,25:25:63.22:1024,63,0	1/1:0,33:33:81.28:1313,81,0	1/1:0,34:34:93.12:1348,93,0	1/1:0,27:27:54.18:878,54,0	1/1:0,25:25:75:1063,75,0	1/1:0,12:12:24.08:390,24,0	1/1:0,24:24:51.17:818,51,0	1/1:1,17:18:33.11:517,33,0	1/1:0,31:30:60.17:970,60,0	1/1:0,15:15:36.12:584,36,0	1/1:0,18:18:30.10:488,30,0	1/1:0,25:25:51.17:824,51,0	1/1:0,24:24:60.05:972,60,0	1/1:0,25:25:75.17:1085,75,0	1/1:0,18:18:36.12:585,36,0	1/1:0,62:62:99:2389,148,0	1/1:0,22:22:42.14:666,42,0	1/1:0,26:26:66.21:1070,66,0	1/1:0,26:26:51.17:828,51,0	1/1:0,24:24:66.23:1074,66,0	1/1:0,31:31:90.15:1341,90,0	1/1:0,28:28:60.20:976,60,0	1/1:0,5:5:9.03:146,9,0
chr10	14610148	.	TTC	T	1237.29	PASS	AB=0.938;AC=26;AF=0.542;AN=48;BaseQRankSum=-7.564;DP=115;FS=6.653;HRun=0;HaplotypeScore=20.5701;InbreedingCoeff=0.0075;MQ=63.88;MQ0=0;MQRankSum=2.858;QD=13.75;ReadPosRankSum=-4.728;VQSLOD=0.8177;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:8,1:8:20.82:119,0,21	0/1:2,0:2:2.82:34,0,3	0/1:13,4:5:24.39:24,0,65	0/0:8,2:4:5.18:0,5,26	1/1:4,1:5:9.87:104,10,0	0/0:1,0:1:2.37:0,2,8	0/1:2,0:2:2.82:35,0,3	0/1:4,4:8:16.03:140,0,16	0/0:4,0:4:9.61:0,10,34	1/1:4,0:3:6.02:81,6,0	0/1:5,0:5:5.24:96,0,5	0/0:5,0:5:11.98:0,12,42	0/1:4,0:4:6.56:71,0,7	./.	1/1:3,0:3:9.03:122,9,0	1/1:1,0:1:3.01:41,3,0	1/1:3,0:3:0.76:60,1,0	./.	1/1:2,1:1:3.01:42,3,0	1/1:3,0:3:9.02:108,9,0	./.	0/1:6,0:6:17.08:29,0,17	0/0:3,0:3:6.75:0,7,23	./.	1/1:6,0:6:2.57:155,3,0	0/1:3,0:3:12.59:32,0,13	0/1:6,0:6:3.66:89,0,4	0/0:1,0:1:2.60:0,3,10
chr10	14610150	.	C	CT	3071.42	PASS	AB=0.952;AC=45;AF=0.938;AN=48;BaseQRankSum=-3.283;DP=129;FS=11.208;HRun=2;HaplotypeScore=13.9607;InbreedingCoeff=0.1567;MQ=62.70;MQ0=2;MQRankSum=0.272;QD=26.48;ReadPosRankSum=2.578;VQSLOD=1.6698;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,7:8:11.66:278,12,0	1/1:0,2:2:6.02:87,6,0	0/1:19,1:6:21.47:21,0,79	0/0:11,0:4:5.20:0,5,28	1/1:2,3:5:9.50:128,10,0	1/1:0,1:1:3.01:45,3,0	1/1:0,2:2:6.02:86,6,0	1/1:8,3:11:23.11:322,23,0	1/1:0,4:4:12.04:179,12,0	1/1:0,4:3:6.02:82,6,0	1/1:0,6:6:15.05:204,15,0	1/1:0,5:5:15.05:224,15,0	1/1:0,4:4:12.04:171,12,0	./.	1/1:0,3:3:9.03:123,9,0	1/1:0,1:1:3.01:41,3,0	1/1:1,3:4:9.02:111,9,0	./.	1/1:3,0:1:3.01:40,3,0	1/1:0,3:3:9.03:126,9,0	./.	1/1:0,6:6:15.05:220,15,0	1/1:2,2:4:2.82:85,3,0	./.	1/1:0,9:9:15.05:207,15,0	1/1:0,3:3:9.03:131,9,0	1/1:0,6:6:15.05:216,15,0	1/1:0,1:1:3.01:45,3,0
chr10	14611608	.	CTCTCTCTG	C	8336.34	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=9.487;DP=744;FS=0.000;HRun=0;HaplotypeScore=214.0750;InbreedingCoeff=0.9919;MQ=70.76;MQ0=2;MQRankSum=-11.741;QD=40.47;ReadPosRankSum=0.167;VQSLOD=4.4384;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:17,16:33:66.14:1252,66,0	0/0:7,0:7:18.06:0,18,616	0/0:24,0:18:18.04:0,18,488	0/0:46,0:37:47.84:0,48,1051	0/0:23,0:23:45.15:0,45,1688	0/0:26,0:26:69.19:0,69,2420	0/0:34,0:34:78.24:0,78,2755	0/0:37,0:37:63.20:0,63,1937	0/0:30,0:29:72.22:0,72,2529	0/0:25,0:25:51.17:0,51,1755	0/0:12,0:12:27.09:0,27,1068	1/1:17,16:33:71.27:1545,71,0	1/1:12,9:21:48.15:1021,48,0	1/1:7,21:29:72.25:1579,72,0	0/0:34,0:34:78.27:0,78,3018	0/0:26,0:26:69.24:0,69,2688	0/0:25,0:24:51.17:0,51,1938	0/0:26,0:26:45.15:0,45,1837	0/0:20,0:20:36.10:0,36,1172	0/0:26,0:26:56.79:0,57,2057	0/0:56,0:56:99:0,115,4816	1/1:9,12:21:45.07:848,45,0	1/1:9,7:16:39.04:601,39,0	1/1:20,8:28:29.80:584,30,0	1/1:9,16:25:54.08:905,54,0	0/0:31,0:31:72.25:0,72,2760	0/0:24,0:24:51.16:0,51,1838	0/0:6,0:6:12.04:0,12,501
chr10	14611668	.	GTC	G	14699.79	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=4.659;DP=708;FS=0.953;HRun=0;HaplotypeScore=137.2836;InbreedingCoeff=0.9980;MQ=64.02;MQ0=9;MQRankSum=0.407;QD=25.34;ReadPosRankSum=5.937;VQSLOD=5.3320;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,23:32:60.19:750,60,0	1/1:1,10:11:27.09:338,27,0	0/0:35,0:25:44.32:0,44,716	0/0:35,0:22:45.12:0,45,666	1/1:5,12:18:29.76:351,30,0	0/0:23,0:23:47.78:0,48,759	0/0:33,1:34:43.75:0,44,1196	1/1:10,26:36:49.82:895,50,0	1/1:4,23:27:57.86:746,58,0	1/1:3,16:19:45.14:563,45,0	1/1:3,10:13:26.97:338,27,0	1/1:8,23:31:54.17:675,54,0	1/1:3,27:30:72.23:900,72,0	1/1:6,26:35:86.77:1017,87,0	1/1:4,23:27:63.20:788,63,0	1/1:4,24:28:60.06:750,60,0	1/1:5,19:23:45.14:563,45,0	1/1:6,26:32:63.20:788,63,0	1/1:6,13:19:38.98:452,39,0	1/1:5,12:17:24.04:300,24,0	1/1:8,30:38:78.25:975,78,0	1/1:5,19:24:51.16:638,51,0	1/1:3,15:18:27.81:339,28,0	1/1:6,27:33:60.07:750,60,0	1/1:9,14:23:36.08:450,36,0	1/1:6,16:22:48.13:584,48,0	1/1:2,11:13:33.11:413,33,0	1/1:1,8:9:27.09:338,27,0
chr10	14616383	.	GGTGTGTGTGT	G	1810.65	PASS	AB=0.967;AC=41;AF=0.788;AN=52;BaseQRankSum=2.698;DP=473;FS=5.909;HRun=0;HaplotypeScore=145.8983;InbreedingCoeff=0.1681;MQ=66.67;MQ0=20;MQRankSum=-0.147;QD=5.04;ReadPosRankSum=1.594;VQSLOD=2.1457;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:26:3.01:39,3,0	0/1:7,0:7:0:0,0,0	0/0:23,0:20:1.82:0,2,5	0/0:31,0:23:0:0,0,0	1/1:4,2:6:1.36:2,1,0	0/0:15,0:16:2.29:0,2,342	1/1:19,0:14:0.89:2,1,0	0/0:24,0:21:0.68:0,1,2	1/1:9,0:14:3.01:73,3,0	0/1:19,1:20:27.23:204,0,27	./.	1/1:20,0:20:8.95:100,9,0	1/1:19,0:23:17.87:300,18,0	1/1:16,0:15:5.66:91,6,0	1/1:13,11:25:6.88:168,7,0	1/1:12,7:20:9.03:250,9,0	1/1:20,2:19:3.01:88,3,0	1/1:16,0:15:3.01:74,3,0	./.	1/1:3,0:6:2.97:20,3,0	1/1:27,1:26:3.48:83,3,0	1/1:5,0:10:3.45:22,3,0	1/1:8,0:10:3.01:38,3,0	1/1:20,0:20:1.25:3,1,0	1/1:10,0:12:3.01:39,3,0	0/1:17,1:18:46.56:109,0,47	1/1:8,0:9:3.01:55,3,0	1/1:5,0:7:6.02:159,6,0
chr10	14616425	.	T	TGAGAGAGAGAGAGA	1238.03	PASS	AB=0.985;AC=31;AF=0.596;AN=52;BaseQRankSum=-0.570;DP=468;FS=1.973;HRun=0;HaplotypeScore=185.9037;InbreedingCoeff=-0.1259;MQ=27.48;MQ0=88;MQRankSum=-0.502;QD=2.99;ReadPosRankSum=-2.546;VQSLOD=2.4740;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:17:0.46:0,0,38	1/1:5,0:5:1.25:3,1,0	./.	./.	1/1:13,0:10:0.47:1,0,0	0/1:19,0:16:35.61:105,0,36	1/1:15,0:6:0.89:2,1,0	0/1:37,0:29:8.45:8,0,438	1/1:13,0:11:5.50:51,6,0	0/1:18,0:13:99:307,0,143	0/1:15,0:11:22.65:23,0,119	0/1:21,4:17:2.22:84,0,2	0/1:15,0:13:99:265,0,201	1/1:22,0:20:0.41:2,0,0	1/1:20,0:19:7.06:66,7,0	0/1:19,0:17:41.12:82,0,41	0/1:15,0:7:0.34:0,0,14	0/1:16,0:12:14.48:14,0,318	0/0:10,0:5:11.99:0,12,177	1/1:15,0:12:0.35:1,0,0	0/1:31,0:19:20.40:20,0,26	0/1:29,0:26:9.83:118,0,10	0/1:17,0:13:0.60:1,0,4	1/1:17,0:14:1.73:4,2,0	0/0:15,0:13:7.97:0,8,34	0/1:24,0:22:99:126,0,461	0/0:7,0:6:9.03:0,9,212	1/1:13,0:11:7.64:85,8,0
chr10	14616429	.	TGAGAGAGAGAGA	T	147	PASS	AB=0.981;AC=11;AF=0.204;AN=54;BaseQRankSum=4.496;DP=572;FS=2.754;HRun=0;HaplotypeScore=198.3340;InbreedingCoeff=0.2459;MQ=27.55;MQ0=87;MQRankSum=-0.517;QD=0.68;ReadPosRankSum=-3.973;VQSLOD=2.1795;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:22:28.83:29,0,297	0/0:8,0:8:3.01:0,3,56	0/0:1,0:1:3.01:0,3,112	./.	0/0:16,0:13:0.47:0,0,1	0/0:24,0:21:15.95:0,16,663	0/0:20,0:11:6.17:0,6,131	0/1:42,5:37:99:119,0,2478	0/0:14,0:12:4.05:0,4,10	0/0:23,0:16:39.13:0,39,1326	0/0:20,0:16:9.28:0,9,268	0/0:29,0:22:10.59:0,11,256	0/1:17,0:14:39.96:40,0,344	0/1:24,0:22:5.70:6,0,112	0/0:24,0:22:6.24:0,6,46	0/0:30,0:28:16.25:0,16,426	0/0:17,0:9:18.61:0,19,344	0/0:17,0:13:33.09:0,33,1052	0/0:17,0:12:30.10:0,30,1127	0/0:17,0:14:0.10:0,0,0	1/1:31,0:19:3.74:44,4,0	0/1:32,0:29:7.58:8,0,150	0/0:22,0:18:5.75:0,6,50	1/1:21,0:18:5:16,5,0	1/1:15,0:13:8.16:22,8,0	0/0:32,0:30:74.99:0,75,2525	0/0:12,0:10:25.33:0,25,813	0/0:13,0:11:30:0,30,657
chr10	14616863	.	C	CT	1369.20	PASS	AB=0.814;AC=26;AF=0.464;AN=56;BaseQRankSum=-1.170;DP=508;FS=2.377;HRun=15;HaplotypeScore=64.5104;InbreedingCoeff=-0.1473;MQ=66.40;MQ0=1;MQRankSum=0.405;QD=3.39;ReadPosRankSum=-1.083;VQSLOD=-0.0422;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,24:37:25.23:284,25,0	0/0:9,0:9:17.63:0,18,108	0/0:11,0:6:0.69:0,1,21	0/0:13,0:10:4.86:0,5,22	0/1:17,5:22:36.77:37,0,38	0/1:8,7:17:0.35:86,0,0	0/1:11,9:21:10.08:151,0,10	0/1:22,4:26:0.39:0,0,113	0/1:10,2:13:6.40:6,0,65	0/0:13,0:16:25.88:0,26,130	1/1:10,2:12:2.45:45,2,0	1/1:12,18:32:6.12:151,6,0	1/1:3,3:7:2.61:56,3,0	0/1:13,6:23:23.72:29,0,24	0/1:19,0:21:18.37:18,0,76	0/0:11,0:12:6.74:0,7,39	0/1:33,3:38:54.81:55,0,232	0/0:17,0:18:33.31:0,33,190	0/1:13,2:15:26.88:27,0,84	0/1:15,1:18:19.46:19,0,80	0/1:16,1:17:27.15:108,0,27	0/1:9,4:14:6.18:53,0,6	0/1:8,10:19:8.33:139,0,8	1/1:9,11:20:17.98:152,18,0	0/1:5,5:11:15.25:88,0,15	0/0:23,0:24:34.15:0,34,203	0/1:11,2:13:21.40:21,0,73	0/1:7,0:8:5.47:5,0,27
chr10	14623810	.	TC	T	7256.45	PASS	AB=0.818;AC=54;AF=0.964;AN=56;BaseQRankSum=-6.115;DP=399;FS=0.000;HRun=9;HaplotypeScore=53.9923;InbreedingCoeff=-0.0557;MQ=95.45;MQ0=0;MQRankSum=-4.197;QD=18.19;ReadPosRankSum=4.791;VQSLOD=4.8886;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,40:46:99:906,99,0	1/1:3,4:7:9:82,9,0	0/1:20,11:27:51.06:239,0,51	0/1:26,3:28:99:104,0,113	1/1:1,8:9:20.98:185,21,0	1/1:1,5:6:12.01:110,12,0	1/1:3,9:12:15.01:137,15,0	1/1:4,7:11:17.93:147,18,0	1/1:0,12:12:33.02:302,33,0	1/1:2,11:13:33.02:302,33,0	1/1:2,4:6:9:82,9,0	1/1:2,14:16:33.02:302,33,0	1/1:1,7:8:21.01:192,21,0	1/1:2,19:21:50.92:466,51,0	1/1:1,15:16:39.02:357,39,0	1/1:1,8:9:24.01:220,24,0	1/1:2,24:26:72.04:659,72,0	1/1:0,7:7:18.01:165,18,0	1/1:0,9:9:27:243,27,0	1/1:0,5:5:15.01:137,15,0	1/1:5,27:32:75.51:687,76,0	1/1:5,9:14:27.01:247,27,0	1/1:3,0:3:5.99:50,6,0	1/1:4,10:14:4.20:172,4,0	1/1:1,6:7:18.01:165,18,0	1/1:3,9:12:30:270,30,0	1/1:1,9:10:24.01:220,24,0	1/1:0,6:6:12.01:110,12,0
chr10	14631956	.	G	GA	13978.34	PASS	AB=0.848;AC=37;AF=0.661;AN=56;BaseQRankSum=-1.587;DP=522;FS=0.717;HRun=0;HaplotypeScore=58.5487;InbreedingCoeff=0.7986;MQ=66.35;MQ0=0;MQRankSum=-0.538;QD=40.17;ReadPosRankSum=1.198;VQSLOD=5.2718;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:59.75:0,60,795	1/1:0,3:3:9.03:141,9,0	0/1:5,0:5:1.91:2,0,7	0/1:3,0:3:1.43:1,0,30	1/1:0,5:5:6.02:94,6,0	1/1:0,12:12:27.09:421,27,0	1/1:1,34:36:90.30:1398,90,0	1/1:3,19:22:54.15:776,54,0	1/1:0,25:25:66.09:1031,66,0	1/1:0,17:17:45.14:676,45,0	1/1:0,3:3:9.03:141,9,0	0/0:29,0:29:87.28:0,87,1199	0/0:26,0:26:75.04:0,75,961	0/0:27,0:27:81.23:0,81,1078	1/1:0,18:18:45.15:704,45,0	1/1:0,25:25:75.26:1174,75,0	1/1:0,37:37:99:1596,102,0	1/1:0,26:26:75.26:1173,75,0	1/1:1,15:16:47.36:691,47,0	0/1:1,5:6:23.85:216,0,24	1/1:1,43:44:99:1923,123,0	0/0:8,0:8:23.27:0,23,266	0/0:7,0:7:18.06:0,18,249	0/0:44,0:44:99:0,132,1789	0/0:10,0:10:30.07:0,30,396	1/1:1,19:20:57.18:840,57,0	1/1:1,17:18:48.16:747,48,0	1/1:0,7:7:15.05:234,15,0
chr10	14634659	.	AC	A	4265.77	PASS	AB=0.963;AC=36;AF=0.643;AN=56;BaseQRankSum=7.479;DP=448;FS=19.773;HRun=11;HaplotypeScore=64.1798;InbreedingCoeff=0.5387;MQ=79.22;MQ0=0;MQRankSum=-3.258;QD=12.40;ReadPosRankSum=4.014;VQSLOD=2.8306;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:21,1:21:6.94:7,0,313	1/1:3,2:5:2.99:25,3,0	0/0:11,0:11:23.91:0,24,226	0/0:17,1:18:0.85:0,1,140	1/1:2,4:6:5.93:49,6,0	1/1:4,6:10:23.96:196,24,0	1/1:7,21:30:54.28:429,54,0	1/1:11,8:18:19.83:143,20,0	1/1:7,19:26:62.91:515,63,0	0/0:17,0:17:17.98:0,18,184	0/0:4,0:4:3:0,3,32	0/0:24,1:25:15.87:0,16,324	0/1:17,0:17:16.11:16,0,206	0/1:19,1:20:49.89:50,0,294	1/1:5,14:19:38.94:320,39,0	1/1:6,11:17:41.90:339,42,0	1/1:5,12:17:38.95:320,39,0	1/1:3,13:19:45.06:337,45,0	1/1:6,6:13:19.92:147,20,0	1/1:4,0:5:5.03:30,5,0	1/1:14,33:47:92.79:754,93,0	0/0:5,0:5:9:0,9,82	0/0:4,0:4:6.02:0,6,64	0/0:20,0:20:45.07:0,45,452	0/1:16,1:17:18.94:19,0,226	1/1:6,8:14:34.18:253,34,0	1/1:6,7:13:32.93:266,33,0	1/1:3,3:6:5.99:49,6,0
chr10	14636580	.	GA	G	16301.27	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=14.370;DP=812;FS=3.021;HRun=1;HaplotypeScore=88.4749;InbreedingCoeff=0.9859;MQ=69.27;MQ0=0;MQRankSum=0.027;QD=36.23;ReadPosRankSum=0.787;VQSLOD=4.9950;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,162,2487	1/1:0,19:19:41.95:561,42,0	0/0:13,0:13:13:0,13,326	0/0:8,0:8:7.72:0,8,103	1/1:0,29:29:78.19:1057,78,0	0/0:26,0:26:69.22:0,69,1066	0/0:35,0:35:93.17:0,93,1402	1/1:0,20:20:60.12:757,60,0	1/1:0,29:29:78.26:1084,78,0	1/1:0,34:33:99:1293,99,0	1/1:0,19:19:45.02:559,45,0	0/0:43,0:43:99:0,120,1823	0/0:32,0:32:90.28:0,90,1382	0/0:48,0:48:99:0,135,1980	1/1:1,46:47:99:1573,107,0	1/1:0,45:45:99:1668,120,0	1/1:0,27:27:69.23:959,69,0	1/1:0,18:18:45.15:626,45,0	1/1:0,24:24:72.14:903,72,0	1/1:0,28:28:75.17:998,75,0	1/1:0,36:36:99:1417,102,0	0/0:26,0:26:78.10:0,78,1161	0/0:30,0:30:80.95:0,81,1197	0/0:24,0:24:72.19:0,72,1072	0/0:22,0:22:63.17:0,63,932	1/1:5,32:37:99:1429,100,0	1/1:0,26:26:69.23:958,69,0	1/1:0,12:12:33.11:458,33,0
chr10	14639702	.	T	TG	1481.38	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-8.501;DP=691;FS=2.694;HRun=6;HaplotypeScore=69.8839;InbreedingCoeff=0.9986;MQ=88.68;MQ0=0;MQRankSum=-2.938;QD=27.95;ReadPosRankSum=-0.266;VQSLOD=4.1280;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,108,1077	0/0:12,0:12:27.06:0,27,275	0/0:32,1:33:40.94:0,41,571	0/0:30,0:30:63.13:0,63,637	0/0:18,0:18:48.09:0,48,482	1/1:2,23:25:60.12:735,60,0	1/1:2,26:28:69.22:868,69,0	0/0:30,0:30:75.13:0,75,751	0/0:15,0:15:45.09:0,45,452	0/0:21,0:21:48.10:0,48,485	0/0:12,0:12:33.06:0,33,329	0/0:20,0:20:51.06:0,51,503	0/0:32,0:32:81.14:0,81,812	0/0:31,0:31:87.18:0,87,880	0/0:18,0:18:51.10:0,51,515	0/0:23,0:23:69.16:0,69,704	0/0:27,0:27:75.16:0,75,758	0/0:29,0:29:84.16:0,84,847	0/0:16,0:16:45.10:0,45,459	0/0:19,0:19:48.07:0,48,478	0/0:52,0:52:99:0,141,1430	0/0:21,0:21:54.08:0,54,540	0/0:13,0:13:27.05:0,27,275	0/0:37,0:37:99:0,102,1019	0/0:19,0:19:42.09:0,42,428	0/0:23,0:23:63.11:0,63,625	0/0:32,0:31:78.11:0,78,781	0/0:13,0:13:33.07:0,33,336
chr10	14641086	.	G	GC	409.63	PASS	AB=0.560;AC=3;AF=0.054;AN=56;BaseQRankSum=-4.855;DP=555;FS=1.778;HRun=9;HaplotypeScore=56.4161;InbreedingCoeff=0.5941;MQ=79.53;MQ0=0;MQRankSum=0.160;QD=15.76;ReadPosRankSum=-0.072;VQSLOD=3.6234;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:28:64.91:0,65,542	0/0:10,0:10:26.99:0,27,232	0/0:17,0:17:6.97:0,7,240	0/0:27,0:26:30:0,30,333	0/0:8,0:8:14.97:0,15,130	0/1:3,10:14:22.20:217,0,22	1/1:3,9:12:27.07:299,27,0	0/0:32,0:32:38.94:0,39,337	0/0:17,0:17:47.96:0,48,412	0/0:27,0:27:68.97:0,69,599	0/0:11,0:11:29.99:0,30,258	0/0:21,0:21:26.51:0,27,392	0/0:23,0:23:50.97:0,51,443	0/0:22,1:23:23.78:0,24,435	0/0:32,0:32:74.94:0,75,647	0/0:21,0:21:53.96:0,54,468	0/0:22,0:22:59.98:0,60,521	0/0:22,1:23:17.78:0,18,379	0/0:20,0:20:18.17:0,18,288	0/0:16,0:16:23.85:0,24,198	0/0:23,0:23:47.97:0,48,417	0/0:11,0:12:32.02:0,32,265	0/0:14,0:14:29.99:0,30,260	0/0:27,0:27:62.97:0,63,547	0/0:12,0:13:32.03:0,32,266	0/0:23,0:23:47.96:0,48,417	0/0:24,0:25:62.01:0,62,527	0/0:14,0:14:32.97:0,33,286
chr10	14641798	.	CGT	C	1151.76	PASS	AB=0.913;AC=27;AF=0.500;AN=54;BaseQRankSum=2.704;DP=629;FS=1.669;HRun=0;HaplotypeScore=75.1862;InbreedingCoeff=0.3443;MQ=65.92;MQ0=11;MQRankSum=2.695;QD=2.76;ReadPosRankSum=1.001;VQSLOD=1.7922;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:40,0:39:20.93:188,21,0	1/1:5,1:6:3.01:33,3,0	0/0:31,0:17:0:0,0,0	./.	0/0:6,0:6:3.01:0,3,36	0/0:24,0:24:8.01:0,8,52	0/0:30,0:30:12.41:0,12,98	0/0:21,0:21:5.99:0,6,64	0/0:21,0:21:5.77:0,6,87	1/1:8,4:13:6.01:65,6,0	1/1:7,0:7:2.80:13,3,0	1/1:18,1:22:14.66:112,15,0	1/1:13,5:19:14.15:143,14,0	1/1:15,0:18:14.85:134,15,0	0/1:23,2:26:28.67:29,0,143	0/0:10,0:24:27.02:0,27,269	0/1:31,3:35:7.67:8,0,399	0/1:37,2:42:99:122,0,423	0/1:14,0:13:0:0,0,0	0/0:12,0:12:18.01:0,18,223	0/1:63,0:61:2.89:3,0,293	1/1:13,3:18:14.87:144,15,0	1/1:9,4:12:3.01:33,3,0	0/1:32,14:48:15.05:208,0,15	1/1:9,3:13:8.72:79,9,0	0/0:10,0:10:3.01:0,3,44	0/1:18,1:19:5.62:6,0,232	0/0:8,0:8:7.25:0,7,72
chr10	14641837	.	G	GTGTA	525.03	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=1.337;DP=621;FS=0.000;HRun=0;HaplotypeScore=115.3953;InbreedingCoeff=0.5824;MQ=63.12;MQ0=10;MQRankSum=-2.647;QD=6.73;ReadPosRankSum=0.531;VQSLOD=2.1536;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:53.53:0,54,456	0/0:9,0:9:20.98:0,21,185	0/0:26,0:17:42.45:0,42,428	0/0:20,0:18:47.96:0,48,480	0/0:9,0:8:17.97:0,18,162	1/1:2,16:20:6.02:158,6,0	1/1:5,22:31:1.15:228,1,0	0/0:28,0:28:72.87:0,73,614	0/0:23,0:23:44.88:0,45,388	0/0:16,0:16:37.34:0,37,335	0/0:8,0:8:23.97:0,24,201	0/0:22,0:22:44.92:0,45,405	0/0:18,0:18:39:0,39,342	0/0:14,0:14:24.21:0,24,212	0/0:21,0:21:41.24:0,41,427	0/1:26,0:25:99:245,0,125	0/0:37,0:37:74.89:0,75,807	0/0:38,0:37:71.20:0,71,1041	0/0:15,0:14:24.42:0,24,202	0/0:17,0:17:38.94:0,39,406	0/0:57,0:56:99:0,102,913	0/0:20,0:19:35.80:0,36,309	0/0:10,0:10:14.98:0,15,133	0/0:40,0:40:63.01:0,63,642	0/0:18,0:18:26.02:0,26,318	0/0:17,0:16:38.72:0,39,334	0/0:17,0:17:44.90:0,45,467	0/0:13,0:13:25.66:0,26,225
chr10	14646346	.	A	ACCC	797.97	PASS	AB=0.981;AC=6;AF=0.107;AN=56;BaseQRankSum=2.286;DP=546;FS=2.826;HRun=8;HaplotypeScore=87.0922;InbreedingCoeff=0.6389;MQ=72.96;MQ0=2;MQRankSum=-0.958;QD=10.64;ReadPosRankSum=-2.489;VQSLOD=-0.6928;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,105,1378	0/0:9,0:9:24.08:0,24,314	0/1:24,0:20:9.85:10,0,185	0/1:13,0:11:15.49:15,0,68	0/0:16,0:16:36.07:0,36,457	1/1:5,7:13:21.07:377,21,0	1/1:10,6:24:33.07:529,33,0	0/0:27,0:27:48.09:0,48,629	0/0:20,0:20:41.06:0,41,584	0/0:18,0:18:45.12:0,45,584	0/0:19,0:19:42.12:0,42,551	0/0:22,0:22:51.13:0,51,669	0/0:20,0:20:54.14:0,54,694	0/0:25,0:25:63.17:0,63,826	0/0:18,0:18:42.08:0,42,517	0/0:11,0:11:27.08:0,27,344	0/0:27,0:27:69.20:0,69,906	0/0:32,0:32:84.23:0,84,1084	0/0:19,0:19:42.10:0,42,541	0/0:10,0:10:21.06:0,21,276	0/0:23,0:23:48.11:0,48,614	0/0:18,0:18:40.89:0,41,492	0/0:18,0:18:42.05:0,42,518	0/0:15,0:15:42.13:0,42,551	0/0:16,0:16:42.13:0,42,538	0/0:16,0:16:35.88:0,36,446	0/0:16,0:16:39.07:0,39,492	0/0:16,0:16:42.12:0,42,540
chr10	14649598	.	A	AT	1209.15	PASS	AB=0.998;AC=23;AF=0.411;AN=56;BaseQRankSum=5.414;DP=548;FS=13.311;HRun=8;HaplotypeScore=72.5423;InbreedingCoeff=-0.2459;MQ=68.16;MQ0=0;MQRankSum=0.574;QD=3.03;ReadPosRankSum=1.531;VQSLOD=-0.6136;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:25:6.11:6,0,114	0/0:4,0:4:4.42:0,4,53	0/1:17,0:13:12.47:12,0,95	0/0:13,0:9:0.81:0,1,34	0/1:14,0:14:38.59:39,0,43	1/1:8,13:21:50.63:554,51,0	1/1:5,25:30:39.57:442,40,0	0/0:23,0:23:15.24:0,15,201	0/1:27,0:27:16.11:16,0,68	0/1:18,0:18:10.85:11,0,63	0/1:11,0:11:19.56:20,0,45	0/1:28,0:28:42.57:43,0,47	0/1:28,1:29:44.89:71,0,45	0/1:23,0:23:21.36:21,0,66	0/1:38,0:38:30.55:31,0,87	0/0:23,0:23:12.55:0,13,113	0/1:26,0:26:31.13:31,0,48	0/0:26,0:26:7.84:0,8,74	0/0:17,0:17:15.13:0,15,226	0/1:11,0:11:7.15:7,0,20	0/0:25,0:25:21.37:0,21,253	0/1:16,0:16:6.01:6,0,62	0/1:11,0:11:1.65:2,0,71	0/1:16,0:16:21.64:22,0,31	0/1:10,0:10:4.36:4,0,16	0/0:18,0:18:10.02:0,10,122	0/1:20,0:20:13.37:13,0,109	1/1:8,0:8:6.81:21,7,0
chr10	14649606	.	T	TG	3892.97	PASS	AB=0.721;AC=41;AF=0.732;AN=56;BaseQRankSum=-1.903;DP=556;FS=5.622;HRun=10;HaplotypeScore=78.3711;InbreedingCoeff=-0.1639;MQ=70.54;MQ0=0;MQRankSum=0.205;QD=7.25;ReadPosRankSum=1.714;VQSLOD=2.0390;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:12,14:26:26.78:137,0,27	1/1:3,2:5:5.93:48,6,0	0/0:18,0:15:11.93:0,12,88	0/1:14,0:10:5.72:6,0,36	0/1:7,8:16:17.03:169,0,17	1/1:18,0:18:11.94:109,12,0	0/1:27,0:27:10.01:70,0,10	0/1:12,12:25:4.54:195,0,5	1/1:8,17:26:2.44:221,2,0	1/1:5,12:17:29.96:280,30,0	1/1:6,5:11:12.03:126,12,0	0/1:10,16:26:28.33:249,0,28	0/1:15,11:27:7.63:166,0,8	1/1:11,14:25:17.78:224,18,0	1/1:13,4:38:41.03:272,41,0	1/1:11,0:22:11.69:86,12,0	0/1:8,17:25:16.12:252,0,16	1/1:12,9:24:6.89:125,7,0	0/1:11,9:20:64.86:128,0,65	1/1:4,8:12:12.95:109,13,0	0/1:19,13:32:20.98:109,0,21	1/1:7,8:15:14.97:144,15,0	0/1:9,3:12:0.93:27,0,1	0/1:6,10:16:3.56:169,0,4	1/1:6,7:13:6.02:63,6,0	1/1:7,11:18:17.96:159,18,0	0/1:11,10:21:25.17:154,0,25	1/1:2,4:6:9.02:95,9,0
chr10	14655941	.	A	AG	573.27	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-5.076;DP=624;FS=3.836;HRun=8;HaplotypeScore=62.6136;InbreedingCoeff=0.9476;MQ=78.71;MQ0=0;MQRankSum=0.498;QD=17.91;ReadPosRankSum=-1.035;VQSLOD=3.3836;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:77.99:0,78,706	0/0:12,0:12:30.01:0,30,273	0/0:22,0:22:7.77:0,8,224	0/0:25,0:25:35.17:0,35,295	0/0:25,0:25:21.05:0,21,385	1/1:3,9:12:18.05:200,18,0	1/1:4,16:20:20.68:492,21,0	0/0:32,0:32:65.95:0,66,587	0/0:27,0:27:65.97:0,66,588	0/0:23,0:23:57.02:0,57,518	0/0:13,0:13:23.98:0,24,220	0/0:38,0:38:90.02:0,90,823	0/0:23,0:23:60:0,60,545	0/0:18,0:18:38.98:0,39,352	0/0:20,0:20:60.03:0,60,549	0/0:22,0:22:63.01:0,63,568	0/0:25,0:25:75.04:0,75,686	0/0:26,0:26:72.04:0,72,659	0/0:19,0:19:54.01:0,54,487	0/0:18,0:18:45.01:0,45,411	0/0:43,0:43:99:0,108,974	0/0:11,0:11:24:0,24,220	0/0:16,0:16:42.01:0,42,381	0/0:25,0:25:60.01:0,60,544	0/0:20,0:19:42.01:0,42,383	0/0:27,2:29:27.71:0,28,460	0/0:18,1:19:19.41:0,19,432	0/0:8,0:8:24.01:0,24,219
chr10	14658426	.	CT	C	5142.46	PASS	AB=0.992;AC=45;AF=0.804;AN=56;BaseQRankSum=8.943;DP=529;FS=5.845;HRun=1;HaplotypeScore=139.1982;InbreedingCoeff=-0.2246;MQ=68.11;MQ0=0;MQRankSum=-3.474;QD=9.72;ReadPosRankSum=9.264;VQSLOD=2.0687;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:34,1:35:14.52:321,15,0	1/1:7,0:7:17.47:106,17,0	0/1:13,0:10:19.93:20,0,43	0/1:16,0:14:38.23:38,0,60	1/1:15,0:15:27.47:131,27,0	0/1:20,0:20:20.24:188,0,20	1/1:26,0:26:58.88:300,59,0	0/1:24,1:25:57.90:142,0,58	0/1:19,0:19:16.64:180,0,17	1/1:17,0:17:39.96:189,40,0	1/1:8,1:9:23.10:151,23,0	1/1:26,0:26:46.77:321,47,0	1/1:22,0:22:63.01:351,63,0	1/1:22,0:22:31.60:238,32,0	0/1:20,1:21:14.47:239,0,14	1/1:16,0:16:21.05:210,21,0	1/1:32,0:31:5.61:278,6,0	1/1:15,1:15:23.51:200,24,0	0/1:11,0:11:25.30:56,0,25	0/1:13,0:13:2.46:75,0,2	0/1:34,0:34:43.95:106,0,44	1/1:16,0:16:33.37:168,33,0	0/1:17,0:17:12.27:135,0,12	1/1:20,0:20:44.98:229,45,0	1/1:17,1:18:48.48:312,48,0	0/1:12,0:12:0.43:101,0,0	1/1:25,0:25:22.85:281,23,0	1/1:6,0:6:16.64:77,17,0
chr10	14658457	.	C	CA	7456.36	PASS	AB=0.577;AC=35;AF=0.625;AN=56;BaseQRankSum=-6.460;DP=548;FS=0.000;HRun=0;HaplotypeScore=130.7525;InbreedingCoeff=0.9036;MQ=58.80;MQ0=1;MQRankSum=-1.147;QD=21.24;ReadPosRankSum=0.125;VQSLOD=5.5703;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,1:28:50.34:0,50,252	1/1:2,1:3:8.98:84,9,0	0/0:19,0:11:20.41:0,20,175	0/0:15,0:12:4.15:0,4,114	1/1:6,20:26:43.32:531,43,0	1/1:17,0:17:39.42:145,39,0	1/1:23,0:22:38.47:182,38,0	1/1:11,6:17:39.05:407,39,0	1/1:7,15:22:11.07:391,11,0	1/1:9,12:21:57.55:676,58,0	1/1:5,5:10:21.01:235,21,0	0/0:23,0:22:43.17:0,43,193	0/0:19,0:19:29.64:0,30,214	0/0:18,0:18:41.57:0,42,205	1/1:4,14:18:24.27:368,24,0	1/1:0,21:21:48.16:662,48,0	1/1:7,24:31:16.98:713,17,0	1/1:7,15:22:33.50:478,34,0	1/1:2,8:9:26.85:273,27,0	1/1:2,16:18:18.45:293,18,0	1/1:7,41:48:65.84:836,66,0	0/0:18,0:18:34.83:0,35,175	0/0:17,0:17:38.45:0,38,196	0/0:21,1:21:38.71:0,39,211	0/0:18,0:18:18.10:0,18,175	1/1:4,18:22:49.02:611,49,0	0/1:4,11:15:2.91:404,0,3	1/1:1,6:7:12.03:167,12,0
chr10	14660439	.	CGT	C	417.55	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-0.148;DP=628;FS=1.093;HRun=0;HaplotypeScore=104.6879;InbreedingCoeff=0.7978;MQ=62.30;MQ0=6;MQRankSum=0.128;QD=5.72;ReadPosRankSum=0.549;VQSLOD=2.7637;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,105,1669	0/0:8,0:8:14.94:0,15,157	0/0:12,0:8:18.17:0,18,108	0/0:11,0:6:8.86:0,9,81	0/0:19,0:19:33.11:0,33,504	1/1:15,4:18:35.91:490,36,0	1/1:7,47:52:3:36,3,0	0/0:30,0:30:83.79:0,84,1252	0/0:18,0:18:32.90:0,33,414	0/0:22,0:21:59.89:0,60,752	0/0:9,0:9:8.91:0,9,148	0/0:25,0:25:72.22:0,72,1139	0/0:26,0:26:77.82:0,78,1120	0/0:32,0:32:87.28:0,87,1404	0/0:24,0:24:23.46:0,23,296	0/0:25,0:25:21.02:0,21,262	0/0:32,0:32:45.35:0,45,588	0/0:19,0:19:39.07:0,39,559	0/0:17,0:17:47.94:0,48,597	0/0:10,0:10:14.94:0,15,177	0/0:53,0:52:93.06:0,93,1394	0/0:17,0:17:47.87:0,48,668	0/0:12,0:12:29.84:0,30,479	0/0:37,0:36:83.56:0,84,1244	0/0:12,0:12:30.10:0,30,528	0/0:21,0:21:60.02:0,60,796	0/0:21,0:20:28.46:0,28,299	0/0:3,0:3:9.03:0,9,121
chr10	14660444	.	GCACACACA	G	1858.04	PASS	AB=0.701;AC=21;AF=0.420;AN=50;BaseQRankSum=5.967;DP=648;FS=0.000;HRun=0;HaplotypeScore=151.2808;InbreedingCoeff=0.6182;MQ=57.77;MQ0=13;MQRankSum=-2.346;QD=6.73;ReadPosRankSum=1.320;VQSLOD=2.2108;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:41:67.51:0,68,1726	1/1:3,3:7:3.01:75,3,0	./.	./.	0/0:11,8:19:2.97:0,3,20	0/0:17,0:20:12.87:0,13,210	0/0:47,0:50:9.03:0,9,201	0/0:25,0:25:17.51:0,18,107	1/1:11,6:18:11.70:249,12,0	1/1:23,2:23:1.84:251,2,0	0/0:3,7:10:1.82:0,2,5	0/0:27,0:27:35.98:0,36,788	0/0:25,0:26:47.14:0,47,1330	0/0:37,0:36:45.13:0,45,1438	1/1:6,18:24:5.74:150,6,0	1/1:4,21:27:8.76:202,9,0	1/1:23,14:35:11.73:250,12,0	1/1:12,8:20:9.01:174,9,0	1/1:10,4:14:3.55:237,4,0	0/1:3,5:8:0:0,0,0	0/1:34,21:54:16.50:16,0,103	0/0:21,0:21:24.07:0,24,600	0/0:13,0:13:24.08:0,24,822	0/0:42,0:43:80.56:0,81,2159	0/0:12,0:13:18.52:0,19,399	0/1:13,6:19:1.97:273,0,2	1/1:7,13:19:4.79:148,5,0	./.
chr10	14661238	.	ACC	A	2996.97	PASS	AB=0.733;AC=34;AF=0.630;AN=54;BaseQRankSum=-3.195;DP=233;FS=0.733;HRun=11;HaplotypeScore=51.2136;InbreedingCoeff=0.6651;MQ=83.96;MQ0=0;MQRankSum=-4.001;QD=18.27;ReadPosRankSum=3.139;VQSLOD=2.0636;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:10:2.50:0,2,9	1/1:0,2:2:5.95:50,6,0	0/0:13,0:17:18.32:0,18,158	0/0:6,0:5:7.37:0,7,70	1/1:1,10:11:23.81:210,24,0	0/1:3,0:4:3.35:26,0,3	0/0:7,0:8:13.98:0,14,94	1/1:3,15:18:39.07:408,39,0	1/1:1,7:8:18.04:192,18,0	1/1:1,5:6:17.96:177,18,0	1/1:2,4:6:2.90:17,3,0	0/0:6,0:8:13.45:0,13,71	0/0:3,0:7:9.98:0,10,34	0/0:2,0:3:7.98:0,8,42	1/1:1,15:16:42.03:433,42,0	1/1:0,9:9:18.05:192,18,0	1/1:3,6:10:23.78:227,24,0	1/1:3,7:10:17.96:177,18,0	1/1:9,5:14:14.99:152,15,0	1/1:0,3:3:5.94:50,6,0	1/1:7,14:21:30.38:297,30,0	./.	0/0:3,0:4:4.99:0,5,17	0/0:2,0:3:2.50:0,2,9	0/1:2,1:4:23.43:23,0,25	1/1:2,5:7:14.96:137,15,0	1/1:0,12:12:33.08:351,33,0	1/1:1,2:3:6.01:64,6,0
chr10	14661248	.	CCA	C	383.26	PASS	AB=0.993;AC=18;AF=0.321;AN=56;BaseQRankSum=8.569;DP=250;FS=0.000;HRun=0;HaplotypeScore=57.9784;InbreedingCoeff=-0.2308;MQ=87.16;MQ0=0;MQRankSum=-0.757;QD=2.18;ReadPosRankSum=9.582;VQSLOD=0.2321;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:7:17.85:0,18,138	1/1:2,0:2:2.63:13,3,0	0/0:15,0:15:24.88:0,25,250	0/1:9,0:7:8.84:9,0,152	0/1:13,0:13:24.68:25,0,54	0/1:3,0:3:1.67:2,0,10	0/0:9,0:9:14.86:0,15,112	0/1:19,0:19:64.19:67,0,64	0/1:10,0:10:40.57:41,0,51	0/1:9,0:9:17.94:18,0,70	0/0:6,0:6:12.36:0,12,88	0/0:7,0:7:17.74:0,18,138	0/0:6,1:7:14.69:0,15,94	0/0:6,0:6:14.80:0,15,103	0/1:17,0:17:13.98:65,0,14	0/1:11,0:11:28.60:40,0,29	0/1:16,2:18:78.24:78,0,171	0/1:12,0:12:7.64:8,0,108	0/1:9,0:9:32.95:33,0,86	0/0:4,0:4:1.70:0,2,38	0/1:19,0:19:37.93:38,0,55	0/0:1,1:2:3.47:0,3,26	0/0:2,0:2:5.87:0,6,35	0/0:2,0:2:2.92:0,3,17	0/0:7,0:7:7.99:0,8,89	0/1:9,0:9:16.76:17,0,90	1/1:13,0:13:4.98:77,5,0	0/1:3,0:3:5.67:6,0,12
chr10	14663758	.	GGA	G	181.58	PASS	AB=0.884;AC=5;AF=0.089;AN=56;BaseQRankSum=-2.156;DP=665;FS=5.163;HRun=0;HaplotypeScore=136.9947;InbreedingCoeff=-0.1102;MQ=39.95;MQ0=81;MQRankSum=4.230;QD=1.71;ReadPosRankSum=-3.154;VQSLOD=1.0038;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:27:36.06:0,36,487	0/0:14,0:13:22.28:0,22,235	0/0:27,0:1:3.01:0,3,43	0/0:41,1:2:3.01:0,3,48	0/0:22,0:19:14.82:0,15,222	0/0:26,0:24:47.03:0,47,526	0/0:28,0:28:32.34:0,32,336	0/0:34,0:31:36.59:0,37,513	0/0:23,0:23:33.82:0,34,383	0/0:21,0:20:45.92:0,46,581	0/0:15,0:15:24.83:0,25,266	0/1:31,0:31:92.72:93,0,658	0/1:10,6:16:11.14:11,0,391	0/1:13,2:15:93.23:93,0,328	0/0:29,0:29:51.81:0,52,539	0/0:30,0:29:65.82:0,66,763	0/0:28,0:28:53.43:0,53,570	0/0:18,0:18:40.20:0,40,474	0/0:16,0:12:23.97:0,24,306	0/0:14,0:14:13.64:0,14,130	0/0:44,0:42:29.64:0,30,317	0/1:20,4:21:6.96:7,0,454	0/0:15,0:15:15.05:0,15,221	0/0:34,3:33:68.88:0,69,937	0/1:19,1:19:88.92:89,0,450	0/0:21,0:20:42.09:0,42,513	0/0:19,0:19:23.70:0,24,394	0/0:8,0:7:21.06:0,21,248
chr10	14663760	.	A	ATG	455.44	PASS	AB=0.952;AC=10;AF=0.208;AN=48;BaseQRankSum=-4.689;DP=693;FS=0.000;HRun=0;HaplotypeScore=175.8404;InbreedingCoeff=0.0865;MQ=40.28;MQ0=80;MQRankSum=3.116;QD=2.20;ReadPosRankSum=-0.836;VQSLOD=2.2767;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,7:38:5.71:0,6,44	0/0:15,0:14:11.57:0,12,64	./.	./.	0/0:20,0:19:2.88:0,3,15	0/1:20,0:23:2.98:3,0,64	0/0:23,0:26:5.61:0,6,30	./.	0/0:19,0:23:2.90:0,3,16	0/0:18,0:19:11.49:0,11,74	0/0:16,0:16:5.81:0,6,32	0/1:30,1:31:10.18:172,0,10	0/1:19,0:19:26.35:37,0,26	1/1:17,1:18:3.94:122,4,0	0/0:28,0:30:28.60:0,29,167	0/0:27,0:28:30.65:0,31,158	0/0:24,0:25:14.76:0,15,104	0/0:16,0:17:11.51:0,12,61	0/0:13,0:14:2.90:0,3,16	0/0:13,0:13:5.61:0,6,32	0/0:44,0:42:13.38:0,13,68	0/1:27,0:24:26.28:37,0,26	./.	0/1:28,11:40:29.72:30,0,87	1/1:23,1:23:17.25:181,17,0	0/0:20,0:19:2.97:0,3,20	0/1:15,0:19:4.67:5,0,87	0/0:8,0:7:11.59:0,12,64
chr10	14663762	.	G	GGA	3767.51	PASS	AB=1.000;AC=37;AF=0.661;AN=56;BaseQRankSum=10.443;DP=627;FS=5.998;HRun=0;HaplotypeScore=125.1726;InbreedingCoeff=0.7789;MQ=41.64;MQ0=77;MQRankSum=-4.994;QD=11.15;ReadPosRankSum=-0.773;VQSLOD=2.9837;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:40:30.73:0,31,391	1/1:12,0:10:18.80:166,19,0	0/0:30,0:1:2.04:0,2,6	0/0:40,0:1:3.01:0,3,36	1/1:15,0:13:15.03:202,15,0	1/1:19,1:19:28.52:316,29,0	1/1:18,0:18:20.34:209,20,0	1/1:30,0:28:4.33:57,4,0	1/1:15,1:16:14.32:205,14,0	1/1:13,0:13:20.68:167,21,0	1/1:11,0:11:18.44:160,18,0	0/0:33,0:33:55.85:0,56,709	0/0:20,0:20:28.47:0,28,394	0/0:25,0:25:3.16:0,3,407	1/1:23,1:25:46.20:355,46,0	1/1:22,2:22:47.46:450,47,0	1/1:21,0:22:26.74:276,27,0	1/1:12,1:13:26.83:271,27,0	1/1:11,0:11:2.74:12,3,0	1/1:13,0:13:12.55:103,13,0	1/1:37,0:35:17.88:195,18,0	0/0:30,1:28:38.32:0,38,496	0/1:16,0:16:10.44:10,0,235	0/0:45,0:41:59.06:0,59,791	0/0:24,0:23:43.50:0,44,622	1/1:14,0:14:14.08:165,14,0	1/1:17,1:18:30.24:261,30,0	1/1:7,0:7:17.61:186,18,0
chr10	14664988	.	A	AT	15060.78	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-4.183;DP=572;FS=1.394;HRun=9;HaplotypeScore=46.5870;InbreedingCoeff=0.9061;MQ=65.43;MQ0=0;MQRankSum=-3.487;QD=26.94;ReadPosRankSum=2.538;VQSLOD=5.0794;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,37:38:99:1194,108,0	1/1:1,12:13:33.09:365,33,0	0/0:8,0:6:5.94:0,6,45	0/0:5,0:4:8.99:0,9,77	1/1:6,19:25:57.15:630,57,0	1/1:2,24:26:72.19:796,72,0	1/1:1,27:28:69.19:763,69,0	1/1:5,29:34:87.15:929,87,0	1/1:2,12:14:33.09:365,33,0	1/1:3,26:29:78.20:854,78,0	1/1:3,10:13:27.07:299,27,0	1/1:6,22:28:57.15:626,57,0	1/1:0,13:13:30.08:330,30,0	1/1:4,21:25:63.17:696,63,0	1/1:2,19:21:30.46:510,30,0	1/1:3,14:17:42.11:465,42,0	1/1:3,23:25:40.13:671,40,0	1/1:3,20:23:54.15:597,54,0	1/1:6,20:26:46.14:736,46,0	1/1:5,19:24:54.06:570,54,0	1/1:4,7:12:26.89:270,27,0	1/1:5,11:16:30.07:323,30,0	1/1:1,14:15:36.10:398,36,0	1/1:3,16:19:42.11:465,42,0	1/1:0,23:23:69.19:763,69,0	1/1:3,19:22:60.12:647,60,0	1/1:2,15:17:39.11:431,39,0	1/1:1,11:12:33.09:365,33,0
chr10	14666211	.	TCACA	T	4695.49	PASS	AB=0.752;AC=41;AF=0.854;AN=48;BaseQRankSum=-2.697;DP=528;FS=0.000;HRun=0;HaplotypeScore=96.6487;InbreedingCoeff=0.3543;MQ=62.97;MQ0=8;MQRankSum=0.754;QD=11.31;ReadPosRankSum=1.993;VQSLOD=4.1525;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:14,3:18:3.01:47,3,0	1/1:3,2:5:6.02:93,6,0	./.	./.	1/1:6,4:11:9.01:140,9,0	0/0:13,0:13:9.01:0,9,140	0/0:34,0:36:12.49:0,12,181	1/1:18,0:17:3.01:41,3,0	1/1:10,7:19:24.07:355,24,0	1/1:13,5:18:12.07:204,12,0	./.	1/1:16,12:29:26.64:548,27,0	1/1:11,9:21:14.60:361,15,0	1/1:17,7:26:8.55:242,9,0	1/1:9,10:20:11.59:315,12,0	1/1:12,7:22:18.05:252,18,0	1/1:22,9:30:2.41:305,2,0	1/1:13,10:23:24.08:374,24,0	1/1:14,1:15:3.01:47,3,0	./.	0/1:28,2:30:4.94:171,0,5	1/1:8,4:12:6.02:93,6,0	0/1:3,3:6:0.16:0,0,0	1/1:15,15:30:27.09:420,27,0	0/1:12,11:22:14.48:172,0,14	1/1:13,4:17:18.06:280,18,0	1/1:10,4:13:9.50:141,9,0	1/1:4,2:6:5.31:92,5,0
chr10	14667902	.	GAC	G	23961.38	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=7.698;DP=624;FS=0.000;HRun=0;HaplotypeScore=176.2647;InbreedingCoeff=0.9839;MQ=85.66;MQ0=0;MQRankSum=-10.880;QD=41.67;ReadPosRankSum=7.338;VQSLOD=4.8854;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,31:31:81.07:1185,81,0	1/1:0,11:11:33.11:538,33,0	0/0:25,0:25:75.17:0,75,1439	0/0:24,0:24:69.23:0,69,1344	1/1:1,13:14:14.15:243,14,0	1/1:0,15:15:39.13:634,39,0	1/1:0,37:37:99:1709,105,0	1/1:0,15:15:42.14:683,42,0	1/1:0,25:26:75.26:1215,75,0	1/1:3,19:22:57.19:904,57,0	1/1:0,10:10:21.07:337,21,0	1/1:0,27:27:72.72:1173,73,0	1/1:0,32:33:90.04:1444,90,0	1/1:0,24:24:72.25:1171,72,0	1/1:0,24:24:60.20:977,60,0	1/1:0,26:26:75.26:1212,75,0	1/1:0,27:27:81.28:1313,81,0	1/1:0,23:23:60.20:976,60,0	1/1:0,14:14:42.14:683,42,0	1/1:0,11:11:24.08:390,24,0	1/1:0,45:45:95.61:1560,96,0	1/1:1,16:17:39.13:621,39,0	1/1:0,10:10:20.63:341,21,0	1/1:0,33:33:72.51:1173,73,0	1/1:0,17:17:39.13:635,39,0	1/1:0,19:19:57.06:894,57,0	1/1:0,33:33:93.32:1513,93,0	1/1:1,10:11:25.96:438,26,0
chr10	14671620	.	C	CTAACACAG	17564.60	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-10.334;DP=693;FS=12.001;HRun=0;HaplotypeScore=175.9308;InbreedingCoeff=0.9980;MQ=74.13;MQ0=0;MQRankSum=-17.255;QD=74.43;ReadPosRankSum=2.107;VQSLOD=4.4180;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:16,25:43:75.13:2723,75,0	0/0:7,0:7:18.06:0,18,486	0/0:18,0:18:30.14:0,30,847	0/0:15,0:15:30.10:0,30,731	0/0:19,0:19:42.14:0,42,1029	0/0:21,0:20:51.16:0,51,1287	0/0:43,0:43:99:0,114,2820	0/0:28,0:28:69.22:0,69,1722	0/0:22,0:22:51.18:0,51,1376	0/0:19,0:19:48.16:0,48,1269	0/0:11,0:11:30.09:0,30,746	1/1:15,18:34:60.21:2565,60,0	1/1:8,16:25:54.19:2272,54,0	1/1:15,25:42:93.32:3938,93,0	0/0:22,0:22:51.18:0,51,1344	0/0:33,0:33:90.27:0,90,2188	0/0:31,0:31:69.21:0,69,1718	0/0:27,0:27:69.21:0,69,1803	0/0:25,0:25:72.18:0,72,1715	0/0:14,0:14:36.12:0,36,930	0/0:46,0:46:99:0,126,3212	1/1:9,12:21:39.09:1319,39,0	1/1:1,18:19:42.08:1592,42,0	1/1:13,17:30:39.13:1654,39,0	1/1:6,14:20:36.12:1502,36,0	0/0:30,0:30:78.24:0,78,1911	0/0:17,0:17:51.18:0,51,1368	0/0:9,0:9:24.06:0,24,590
chr10	14672421	.	TAA	T	2010.83	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=5.751;DP=591;FS=1.459;HRun=15;HaplotypeScore=80.9166;InbreedingCoeff=0.9782;MQ=77.10;MQ0=1;MQRankSum=-1.032;QD=10.87;ReadPosRankSum=6.689;VQSLOD=2.5026;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,34:43:73.80:639,74,0	0/0:12,0:13:25.60:0,26,288	0/0:24,0:15:20.20:0,20,227	0/0:30,0:22:17.29:0,17,187	0/0:19,0:19:36.56:0,37,444	0/0:7,0:19:18.02:0,18,171	0/0:7,0:30:42.01:0,42,407	0/0:18,0:22:48.10:0,48,564	0/0:14,0:18:37.97:0,38,411	0/0:24,0:25:48.04:0,48,554	0/0:12,0:12:17.54:0,18,195	1/1:7,21:30:47.13:437,47,0	1/1:9,12:21:27.50:258,27,0	1/1:8,18:27:20.51:273,21,0	0/0:14,0:14:30.08:0,30,391	0/0:15,0:15:32.99:0,33,406	0/0:18,0:23:49.04:0,49,498	0/0:21,0:21:60.09:0,60,755	0/0:18,0:19:38.58:0,39,452	0/0:15,0:15:32.73:0,33,358	0/0:21,0:21:42.08:0,42,508	1/1:8,7:17:20.39:158,20,0	1/1:5,10:15:23.04:209,23,0	1/1:6,9:15:14.85:132,15,0	1/1:5,10:17:8.52:109,9,0	0/0:30,0:32:69.17:0,69,851	0/0:23,0:24:40.53:0,41,451	0/0:9,0:9:27.05:0,27,319
chr10	14677947	.	AG	A	1009.49	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=1.384;DP=509;FS=6.634;HRun=7;HaplotypeScore=63.2945;InbreedingCoeff=0.9633;MQ=75.70;MQ0=0;MQRankSum=-3.808;QD=22.43;ReadPosRankSum=-0.524;VQSLOD=3.1162;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:69.22:0,69,868	0/0:6,0:6:15.05:0,15,189	0/0:12,0:12:33.07:0,33,386	0/0:9,0:9:21.07:0,21,258	0/0:9,0:9:24.08:0,24,302	1/1:1,14:15:39.09:398,39,0	1/1:3,27:30:72.16:733,72,0	0/0:23,0:23:51.15:0,51,620	0/0:10,0:10:27.06:0,27,323	0/0:15,0:15:39.11:0,39,468	0/0:6,0:6:12.04:0,12,151	0/0:32,0:32:87.28:0,87,1094	0/0:22,0:22:60.19:0,60,755	0/0:14,0:14:39.11:0,39,474	0/0:15,0:15:42.12:0,42,515	0/0:17,0:17:48.15:0,48,603	0/0:39,0:39:99:0,105,1308	0/0:21,0:21:54.17:0,54,668	0/0:20,0:19:48.12:0,48,587	0/0:11,0:11:23.68:0,24,272	0/0:35,0:35:87.03:0,87,1094	0/0:10,0:10:30.07:0,30,360	0/0:13,0:13:30.06:0,30,351	0/0:27,0:27:66.20:0,66,817	0/0:15,0:15:33.11:0,33,415	0/0:24,0:24:66.13:0,66,799	0/0:25,0:25:72.20:0,72,889	0/0:6,0:6:15.04:0,15,177
chr10	14678107	.	T	TG	944.07	PASS	AB=0.739;AC=13;AF=0.232;AN=56;BaseQRankSum=0.094;DP=466;FS=6.028;HRun=10;HaplotypeScore=68.7085;InbreedingCoeff=0.3299;MQ=77.07;MQ0=0;MQRankSum=-0.876;QD=5.49;ReadPosRankSum=-1.162;VQSLOD=1.1167;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:22,16:38:40.64:194,0,41	0/0:7,0:7:17.97:0,18,147	0/1:15,3:16:5.17:5,0,154	0/0:16,0:16:25.51:0,26,206	0/0:15,0:16:25.99:0,26,203	0/0:18,0:18:35.91:0,36,291	0/0:24,0:24:27.68:0,28,371	0/0:13,0:13:11.96:0,12,98	0/0:10,0:10:23.96:0,24,196	0/0:17,0:17:23.94:0,24,197	0/0:9,0:9:17.96:0,18,145	0/1:14,9:23:71.87:97,0,72	0/1:8,8:16:4.04:124,0,4	0/1:4,9:13:6.58:142,0,7	0/0:12,0:15:33.84:0,34,258	0/0:8,0:11:27.07:0,27,190	0/0:33,0:35:69.96:0,70,553	0/0:24,1:28:22.05:0,22,353	0/1:11,0:13:0.01:0,0,129	0/0:7,0:8:11.98:0,12,98	0/0:30,1:32:29.88:0,30,433	1/1:2,4:6:6.02:64,6,0	1/1:2,5:7:6.01:64,6,0	0/1:10,13:23:34.83:281,0,35	1/1:3,12:15:12.03:127,12,0	0/0:11,0:11:17.97:0,18,148	0/0:18,0:19:28.95:0,29,227	0/0:5,0:5:11.98:0,12,99
chr10	14681348	.	T	TG	2403.61	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-6.865;DP=504;FS=2.881;HRun=6;HaplotypeScore=54.9623;InbreedingCoeff=0.9619;MQ=80.42;MQ0=0;MQRankSum=0.320;QD=23.80;ReadPosRankSum=0.237;VQSLOD=2.9668;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,22:25:54.17:679,54,0	0/0:11,0:11:33.07:0,33,336	0/0:12,0:12:14.55:0,15,251	0/0:15,0:16:20.08:0,20,244	0/0:13,0:13:24.05:0,24,245	0/0:24,0:24:63.14:0,63,642	0/0:30,0:30:81.14:0,81,805	0/0:13,0:13:26.89:0,27,258	0/0:19,0:19:45.07:0,45,445	0/0:13,0:13:30.04:0,30,298	0/0:12,0:12:29.98:0,30,292	1/1:5,12:17:39.73:464,40,0	1/1:2,13:15:27.09:340,27,0	1/1:1,12:13:36.12:453,36,0	0/0:19,0:19:57.13:0,57,581	0/0:20,0:20:60.12:0,60,605	0/0:26,0:26:75.14:0,75,756	0/0:31,0:31:81.15:0,81,816	0/0:14,0:14:28.29:0,28,278	0/0:18,0:18:45.06:0,45,445	0/0:39,0:39:99:0,111,1114	1/1:0,6:6:12.04:151,12,0	1/1:3,3:6:5.96:65,6,0	1/1:0,4:4:9.03:113,9,0	1/1:2,13:15:27.09:340,27,0	0/0:28,0:28:63.13:0,63,643	0/0:26,0:26:63.12:0,63,636	0/0:19,0:19:51.12:0,51,520
chr10	14682176	.	CT	C	644.64	PASS	AB=0.878;AC=13;AF=0.232;AN=56;BaseQRankSum=-3.394;DP=584;FS=2.430;HRun=16;HaplotypeScore=106.8533;InbreedingCoeff=0.4724;MQ=63.10;MQ0=2;MQRankSum=0.381;QD=3.29;ReadPosRankSum=3.462;VQSLOD=0.6552;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,9:25:5.96:142,6,0	0/0:6,0:6:10.17:0,10,40	0/0:36,0:20:10.90:0,11,90	0/1:29,0:21:6.79:7,0,114	0/0:28,0:31:33.71:0,34,183	0/0:17,0:22:50.75:0,51,254	0/0:14,0:15:27.95:0,28,161	0/0:26,0:30:48.82:0,49,266	0/0:14,0:15:24.37:0,24,127	0/0:27,0:32:44.68:0,45,223	0/0:13,0:15:16.67:0,17,75	0/1:14,2:18:6.92:61,0,7	0/1:19,3:24:44.59:58,0,45	0/1:16,4:20:31.02:57,0,31	0/0:12,0:14:22.16:0,22,122	0/0:12,0:26:25.69:0,26,133	0/0:15,0:16:28.46:0,28,166	0/0:23,0:24:40.04:0,40,235	0/0:16,0:19:44.85:0,45,259	0/0:22,0:25:36.35:0,36,197	0/0:4,0:4:4.64:0,5,21	1/1:16,7:24:20.24:117,20,0	1/1:11,8:20:23.48:146,23,0	0/1:9,1:10:29.14:39,0,29	1/1:14,9:24:32.95:189,33,0	0/0:21,0:22:34.93:0,35,172	0/0:20,0:20:24.81:0,25,154	0/0:11,0:12:20.83:0,21,118
chr10	14682259	.	TGG	T	6829.46	PASS	AB=0.903;AC=51;AF=0.911;AN=56;BaseQRankSum=-3.869;DP=896;FS=1.618;HRun=4;HaplotypeScore=295.6368;InbreedingCoeff=0.2220;MQ=33.86;MQ0=99;MQRankSum=1.381;QD=8.21;ReadPosRankSum=2.760;VQSLOD=0.6255;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:21,1:19:6.64:152,7,0	1/1:15,6:20:32.61:243,33,0	0/1:41,0:4:9.41:9,0,25	0/0:63,0:9:7.38:0,7,96	1/1:30,16:45:1.89:124,2,0	1/1:16,2:16:10.62:197,11,0	1/1:26,0:25:5.16:148,5,0	1/1:29,2:23:11.83:306,12,0	1/1:12,17:24:28.83:303,29,0	1/1:41,6:39:95.53:785,96,0	1/1:21,9:29:7.88:34,8,0	1/1:30,3:28:39.12:299,39,0	1/1:24,3:24:16.61:291,17,0	1/1:22,3:23:8.25:116,8,0	1/1:20,7:22:19.03:159,19,0	1/1:16,5:20:11.63:148,12,0	1/1:8,5:13:35.86:344,36,0	1/1:15,4:17:41.87:398,42,0	1/1:19,2:15:8.03:246,8,0	1/1:26,8:29:23.74:220,24,0	0/1:52,8:46:28.31:318,0,28	0/1:33,7:38:1.68:71,0,2	1/1:28,5:29:13.38:176,13,0	1/1:17,0:15:8.70:72,9,0	1/1:46,14:60:53.27:385,53,0	1/1:25,10:33:42.24:625,42,0	1/1:13,5:17:22.51:234,23,0	1/1:19,4:23:47.74:426,48,0
chr10	14682260	.	GGGGT	G	5425.94	PASS	AB=0.912;AC=44;AF=0.786;AN=56;BaseQRankSum=-4.127;DP=889;FS=0.605;HRun=0;HaplotypeScore=310.9651;InbreedingCoeff=-0.0508;MQ=33.65;MQ0=100;MQRankSum=0.831;QD=6.56;ReadPosRankSum=4.642;VQSLOD=2.5376;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:19,2:19:6.60:182,7,0	1/1:20,0:20:2.47:213,2,0	0/1:41,0:4:9.10:9,0,25	0/0:61,0:9:7.38:0,7,96	0/1:39,1:45:0.64:100,0,1	1/1:13,0:16:22.92:279,23,0	0/1:23,0:25:3.49:197,0,3	0/1:29,0:21:22.32:157,0,22	0/1:24,1:24:7.80:69,0,8	1/1:44,2:38:37.07:499,37,0	1/1:28,0:29:3.07:22,3,0	1/1:26,5:28:26.04:435,26,0	1/1:24,2:24:9.51:360,10,0	1/1:22,2:23:20.10:160,20,0	1/1:26,0:22:11.59:75,12,0	0/1:20,1:20:14.67:15,0,17	1/1:13,0:13:25.42:186,25,0	1/1:15,1:17:32.24:251,32,0	1/1:21,0:14:4.79:144,5,0	1/1:34,0:30:12.15:154,12,0	0/1:60,0:46:34.28:108,0,34	0/1:32,2:38:3.24:125,0,3	0/1:28,4:29:0.01:152,0,0	1/1:15,3:15:8.61:71,9,0	1/1:46,12:59:36.33:563,36,0	1/1:34,1:33:17.76:547,18,0	1/1:18,0:17:9.99:79,10,0	0/1:18,0:23:9.48:274,0,9
chr10	14682307	.	GC	G	7637.66	PASS	AB=0.814;AC=50;AF=0.962;AN=52;BaseQRankSum=-1.939;DP=672;FS=1.999;HRun=3;HaplotypeScore=273.9425;InbreedingCoeff=-0.0485;MQ=37.94;MQ0=9;MQRankSum=-0.962;QD=12.30;ReadPosRankSum=3.498;VQSLOD=3.6549;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,16:18:30.41:302,30,0	1/1:5,7:15:14.39:156,14,0	0/1:19,5:11:61.30:161,0,61	0/1:18,6:9:16.09:132,0,16	./.	1/1:0,11:11:18.06:222,18,0	1/1:2,14:17:11.98:130,12,0	1/1:9,14:21:44.35:527,44,0	1/1:7,13:21:13.24:115,13,0	1/1:4,29:33:78.30:921,78,0	1/1:0,24:26:10.84:112,11,0	1/1:2,21:27:31.80:373,32,0	1/1:0,18:20:27.65:305,28,0	1/1:5,15:22:13.85:217,14,0	1/1:6,20:29:27.79:312,28,0	1/1:2,7:12:20.02:216,20,0	1/1:3,7:9:16.41:143,16,0	1/1:1,7:8:17.27:193,17,0	1/1:2,15:15:45.14:557,45,0	1/1:5,25:34:17.39:157,17,0	1/1:11,29:44:14.20:218,14,0	1/1:3,28:33:27.40:284,27,0	1/1:4,19:25:14.22:132,14,0	./.	1/1:8,47:56:30.65:302,31,0	1/1:6,21:29:72.15:791,72,0	1/1:2,11:14:21.05:239,21,0	1/1:1,15:17:41.90:422,42,0
chr10	14682321	.	GGTA	G	790.81	PASS	AB=0.892;AC=17;AF=0.304;AN=56;BaseQRankSum=6.661;DP=575;FS=45.442;HRun=0;HaplotypeScore=243.3145;InbreedingCoeff=-0.3465;MQ=35.96;MQ0=4;MQRankSum=-4.269;QD=2.02;ReadPosRankSum=-1.810;VQSLOD=1.0015;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:17,1:17:4.06:4,0,269	0/1:12,0:14:34.96:35,0,74	0/0:11,0:7:12.36:0,12,401	0/0:11,0:6:11.99:0,12,201	0/0:22,5:31:0:0,0,0	0/0:5,1:7:8.90:0,9,119	0/1:12,5:17:24.90:25,0,115	0/0:17,0:16:42.14:0,42,892	0/1:13,6:17:22.21:22,0,98	0/1:25,3:32:99:122,0,691	0/0:13,2:21:2.96:0,3,75	0/1:17,3:23:0.63:1,0,174	0/1:9,5:17:99:150,0,124	0/1:13,5:20:96.48:101,0,96	0/1:20,4:26:10.51:11,0,206	0/0:10,2:13:11.89:0,12,160	0/0:9,0:9:7.44:0,7,140	0/0:7,0:7:21.07:0,21,404	0/1:15,1:13:34.67:35,0,667	0/1:24,2:33:58.82:59,0,61	0/0:40,0:40:14.96:0,15,371	0/1:28,2:34:60.77:61,0,134	0/1:19,0:20:0.45:0,0,35	0/1:11,0:9:0.04:0,0,0	0/1:36,2:47:41.65:42,0,84	0/1:18,2:23:99:196,0,610	0/0:11,1:13:17.39:0,17,321	0/1:9,2:15:70.41:70,0,347
chr10	14682326	.	GGTA	G	530.13	PASS	AB=0.865;AC=21;AF=0.375;AN=56;BaseQRankSum=5.911;DP=529;FS=48.370;HRun=0;HaplotypeScore=219.7356;InbreedingCoeff=-0.2035;MQ=34.55;MQ0=4;MQRankSum=-5.297;QD=1.56;ReadPosRankSum=0.808;VQSLOD=1.3702;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:16,1:17:6.92:7,0,32	1/1:11,1:14:3.28:43,3,0	0/0:7,1:6:17.97:0,18,336	0/0:9,0:4:11.99:0,12,204	0/0:25,5:30:0:0,0,0	1/1:6,1:7:2.68:11,3,0	0/1:10,5:17:28.11:28,0,63	0/0:12,0:13:33.09:0,33,663	0/1:10,9:17:16.84:17,0,24	0/1:26,4:30:99:112,0,680	0/0:16,2:18:1.09:0,1,42	0/0:20,4:23:1.05:0,1,120	0/1:11,5:17:89.29:113,0,89	0/1:11,6:18:38.25:38,0,41	0/0:19,6:26:4.43:0,4,124	0/0:7,4:13:4.06:0,4,62	0/1:7,0:9:2.84:3,0,64	0/0:6,0:7:5.37:0,5,266	0/1:13,3:12:8.30:8,0,578	0/1:30,1:32:47.93:48,0,48	0/0:31,0:36:13.14:0,13,309	0/1:29,2:32:10.41:10,0,51	0/1:17,0:18:0.19:0,0,1	0/1:6,1:7:0:0,0,0	1/1:30,4:36:1.71:42,2,0	0/1:17,3:20:99:151,0,565	0/1:8,3:11:8.90:9,0,163	0/1:12,2:14:28.69:29,0,226
chr10	14686729	.	TGTAC	T	92.76	PASS	AB=0.833;AC=14;AF=0.269;AN=52;BaseQRankSum=2.595;DP=339;FS=6.905;HRun=0;HaplotypeScore=125.6279;InbreedingCoeff=0.5473;MQ=54.98;MQ0=2;MQRankSum=-2.072;QD=1.47;ReadPosRankSum=-2.543;VQSLOD=1.2481;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:3,12:15:0.46:1,0,0	0/0:8,0:8:6.02:0,6,98	1/1:5,0:3:4.97:18,5,0	0/0:6,0:4:6.70:0,7,63	0/0:25,0:24:14.88:0,15,201	0/0:12,0:12:11.93:0,12,114	0/0:8,0:8:14.97:0,15,143	0/0:24,0:24:57.28:0,57,518	0/0:15,0:15:18.78:0,19,204	0/0:14,0:14:24.86:0,25,299	0/0:17,0:17:20.71:0,21,260	1/1:1,4:5:3.01:53,3,0	1/1:2,3:5:6.02:82,6,0	./.	0/0:22,0:22:46.38:0,46,529	0/0:18,0:18:39.06:0,39,467	0/0:22,0:22:21.04:0,21,250	0/0:13,0:13:14.43:0,14,90	0/0:11,0:10:1.14:0,1,80	0/0:10,0:10:8.98:0,9,105	0/0:17,0:17:21.50:0,22,222	./.	0/1:2,2:4:0.01:0,0,0	1/1:2,2:4:2.98:22,3,0	1/1:2,12:14:2.82:25,3,0	0/0:18,0:18:29.36:0,29,300	0/1:11,0:11:26:26,0,170	0/0:14,0:14:7.73:0,8,86
chr10	14686733	.	CAT	C	3957.59	PASS	AB=1.000;AC=42;AF=0.875;AN=48;BaseQRankSum=-1.551;DP=328;FS=8.566;HRun=0;HaplotypeScore=103.6639;InbreedingCoeff=0.4330;MQ=54.39;MQ0=2;MQRankSum=-1.732;QD=12.85;ReadPosRankSum=1.160;VQSLOD=3.0065;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:16:0.46:1,0,0	./.	0/1:5,0:3:0:0,0,0	0/1:7,0:4:1.14:2,0,1	1/1:1,23:23:8.69:115,9,0	1/1:1,8:10:6.02:77,6,0	1/1:0,6:6:9.03:116,9,0	1/1:12,11:23:54.08:591,54,0	1/1:1,14:15:14.94:188,15,0	1/1:3,9:12:26.94:290,27,0	1/1:2,13:15:9.01:116,9,0	1/1:6,0:6:3:27,3,0	0/1:5,0:5:0.01:0,0,0	./.	1/1:9,12:21:33.03:365,33,0	1/1:8,10:18:21.07:270,21,0	1/1:2,19:21:17.81:203,18,0	1/1:1,12:13:23.94:266,24,0	1/1:3,8:10:21.07:265,21,0	1/1:1,8:9:3.01:39,3,0	1/1:1,14:15:15.05:193,15,0	./.	0/0:5,0:5:0:0,0,0	./.	0/1:15,0:15:0:0,0,0	1/1:3,14:17:41.97:464,42,0	1/1:1,9:10:21.06:254,21,0	1/1:0,14:14:9.03:115,9,0
chr10	14686744	.	ATG	A	1280.39	PASS	AB=0.963;AC=37;AF=0.881;AN=42;BaseQRankSum=-3.457;DP=312;FS=8.881;HRun=0;HaplotypeScore=109.7296;InbreedingCoeff=0.1743;MQ=48.25;MQ0=3;MQRankSum=2.213;QD=4.54;ReadPosRankSum=4.179;VQSLOD=1.6204;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,2:15:0.22:1,0,0	./.	./.	./.	1/1:25,0:23:8.62:44,9,0	1/1:11,0:11:5.82:32,6,0	1/1:6,0:6:8.52:41,9,0	1/1:26,0:18:13.06:169,13,0	1/1:14,0:14:14.31:75,14,0	0/1:11,0:11:12.39:72,0,12	1/1:17,0:17:8.31:44,8,0	1/1:4,2:6:2.80:13,3,0	./.	./.	1/1:16,0:16:19.78:100,20,0	1/1:12,0:12:19.95:97,20,0	1/1:20,0:20:12.14:74,12,0	1/1:13,0:13:17.46:101,17,0	1/1:10,0:9:5.39:106,5,0	1/1:8,0:8:2.90:16,3,0	1/1:15,0:15:14.38:73,14,0	./.	0/0:2,2:4:0:0,0,0	./.	0/1:14,2:16:0.05:0,0,0	1/1:14,0:14:31.85:186,32,0	1/1:11,0:11:5.42:81,5,0	0/1:16,0:16:4.46:43,0,4
chr10	14686750	.	GTGTGTGTATATA	G	123.64	PASS	AB=0.974;AC=14;AF=0.304;AN=46;BaseQRankSum=5.343;DP=302;FS=3.856;HRun=0;HaplotypeScore=137.8931;InbreedingCoeff=0.0274;MQ=46.43;MQ0=2;MQRankSum=-3.796;QD=0.97;ReadPosRankSum=-1.815;VQSLOD=1.9563;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,1:14:0.62:2,1,0	./.	1/1:3,0:1:2.37:8,2,0	0/0:6,0:4:4.33:0,4,26	0/0:23,0:21:8.24:0,8,147	0/0:13,0:13:5.96:0,6,113	0/0:7,0:7:9.03:0,9,163	0/0:28,0:20:43.76:0,44,527	0/0:13,0:13:12.35:0,12,222	0/1:10,0:10:44.26:44,0,287	0/0:17,0:17:8.11:0,8,165	1/1:5,1:6:3.01:63,3,0	./.	./.	0/0:14,0:14:26.39:0,26,449	0/0:12,0:12:21.07:0,21,381	0/1:19,0:19:19.89:20,0,148	0/1:12,0:12:10.83:11,0,224	0/1:11,0:10:3.83:4,0,246	0/0:7,0:7:2.75:0,3,55	0/0:13,0:13:15.04:0,15,187	./.	0/0:2,2:4:0.47:0,0,1	./.	0/1:11,4:15:0:1,0,0	0/1:14,0:14:24.82:25,0,212	0/1:12,0:12:11.56:12,0,226	0/1:12,0:12:57.75:58,0,101
chr10	14686788	.	GGA	G	60.02	PASS	AB=0.797;AC=13;AF=0.342;AN=38;BaseQRankSum=3.678;DP=249;FS=0.000;HRun=0;HaplotypeScore=103.3211;InbreedingCoeff=-0.1067;MQ=71.28;MQ0=3;MQRankSum=0.072;QD=0.53;ReadPosRankSum=2.721;VQSLOD=1.7061;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:4,5:9:0:0,0,1	0/0:3,2:5:2.98:0,3,22	0/1:17,0:11:4.26:4,0,96	0/0:38,0:21:16.66:0,17,160	./.	0/0:5,5:10:2.77:0,3,19	0/1:2,1:3:0:0,0,0	0/0:24,0:17:44.44:0,44,355	0/1:5,2:7:0:0,0,0	0/1:7,2:9:45.23:45,0,96	0/1:9,4:13:0.07:0,0,0	0/1:3,2:5:0:0,0,0	./.	./.	0/0:5,0:5:0.47:0,0,1	./.	0/1:13,2:15:12.70:13,0,53	0/1:5,1:6:3.14:3,0,31	0/1:8,1:7:9.40:9,0,56	./.	./.	./.	./.	./.	0/0:4,11:15:0:0,0,0	0/1:4,1:5:13.76:14,0,25	0/1:5,2:7:28.93:30,0,29	0/1:4,5:9:5.39:37,0,5
chr10	14686791	.	TATATATGG	T	425.24	PASS	AB=0.864;AC=14;AF=0.304;AN=46;BaseQRankSum=2.988;DP=260;FS=0.000;HRun=0;HaplotypeScore=117.4552;InbreedingCoeff=-0.0001;MQ=70.30;MQ0=3;MQRankSum=0.122;QD=3.70;ReadPosRankSum=3.333;VQSLOD=2.0697;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	0/0:2,2:4:0.47:0,0,1	0/1:17,0:11:14.63:36,0,15	0/0:39,0:21:16.99:0,17,246	./.	1/1:5,5:10:0.36:1,0,0	0/0:2,1:3:0:0,0,0	0/0:25,0:18:39.77:0,40,239	0/1:5,2:7:0:0,0,0	0/1:7,2:9:22.18:100,0,22	0/1:9,4:13:0:0,0,0	0/1:6,0:6:0:0,0,0	0/0:2,0:2:2.04:0,2,6	0/0:5,0:5:2.04:0,2,6	0/0:4,0:4:0.47:0,0,1	0/0:4,3:7:2.99:0,3,24	0/1:13,2:15:5.29:67,0,5	0/1:5,1:6:30.39:37,0,30	0/1:9,1:8:45.26:48,0,45	0/0:5,0:5:2.99:0,3,24	./.	./.	0/0:6,0:6:4.07:0,4,12	./.	0/0:16,0:16:1.93:0,2,5	0/1:5,1:6:41.65:63,0,42	0/1:5,2:7:22.55:62,0,23	1/1:4,5:9:8.24:122,8,0
chr10	14688273	.	G	GAAAA	10668.41	PASS	AB=0.573;AC=49;AF=0.875;AN=56;BaseQRankSum=-4.062;DP=539;FS=13.588;HRun=11;HaplotypeScore=102.9932;InbreedingCoeff=0.4668;MQ=63.12;MQ0=2;MQRankSum=-4.417;QD=21.29;ReadPosRankSum=-0.012;VQSLOD=1.7756;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,0:36:52.49:312,52,0	1/1:0,2:4:6.89:172,7,0	0/0:14,0:10:15.74:0,16,198	0/0:22,0:14:23.93:0,24,254	1/1:6,5:16:30.08:408,30,0	0/1:8,0:23:2.68:166,0,3	1/1:2,0:13:9.91:144,10,0	1/1:17,3:30:60.17:1016,60,0	1/1:2,0:11:15.05:192,15,0	1/1:11,10:23:45.12:827,45,0	1/1:3,6:11:15:201,15,0	1/1:5,0:19:24.28:169,24,0	0/1:4,0:19:60.29:77,0,60	1/1:11,0:20:22.37:143,22,0	1/1:3,10:19:36.04:650,36,0	1/1:6,10:18:20.99:420,21,0	1/1:7,22:32:53.69:1132,54,0	1/1:6,14:24:42.04:753,42,0	1/1:9,9:24:13.10:808,13,0	1/1:6,5:11:25.88:434,26,0	1/1:2,3:8:9.79:125,10,0	1/1:3,0:16:23.18:219,23,0	1/1:4,0:14:9.45:67,9,0	0/1:4,0:27:39.86:183,0,40	1/1:5,0:23:18.35:115,18,0	1/1:5,11:25:69.14:1150,69,0	1/1:6,13:20:25.13:578,25,0	1/1:2,8:10:9.03:208,9,0
chr10	14689469	.	T	TG	11879.50	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-14.198;DP=623;FS=0.308;HRun=2;HaplotypeScore=58.1047;InbreedingCoeff=0.9986;MQ=91.23;MQ0=1;MQRankSum=-4.673;QD=37.36;ReadPosRankSum=2.855;VQSLOD=5.4003;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,132,1619	1/1:0,8:8:18.06:259,18,0	0/0:26,0:26:72.11:0,72,838	0/0:29,0:29:78.16:0,78,929	0/0:19,0:19:57.18:0,57,705	0/0:24,0:24:72.23:0,72,890	0/0:28,0:28:78.24:0,78,963	1/1:2,21:23:57.18:802,57,0	1/1:0,17:17:48.16:691,48,0	1/1:5,27:32:81.27:1163,81,0	1/1:1,15:16:45.15:644,45,0	0/0:23,0:23:69.16:0,69,825	0/0:10,0:10:30.04:0,30,342	0/0:26,0:26:75.23:0,75,924	1/1:1,26:27:65.86:950,66,0	1/1:0,13:12:36.12:518,36,0	1/1:2,30:32:78.26:1123,78,0	1/1:0,27:27:72.24:1037,72,0	1/1:4,18:22:57.19:817,57,0	1/1:0,16:16:45.15:636,45,0	1/1:1,31:32:84.28:1209,84,0	0/0:12,0:12:33.10:0,33,408	0/0:14,0:14:39.11:0,39,466	0/0:34,0:33:96.30:0,96,1186	0/0:15,0:15:42.11:0,42,506	1/1:0,21:21:63.21:906,63,0	1/1:0,22:22:51.17:734,51,0	1/1:0,10:10:27.09:389,27,0
chr10	14693369	.	A	AACAC	4035.23	PASS	AB=0.671;AC=36;AF=0.692;AN=52;BaseQRankSum=2.038;DP=485;FS=0.000;HRun=0;HaplotypeScore=130.9186;InbreedingCoeff=0.5723;MQ=63.17;MQ0=5;MQRankSum=-4.570;QD=11.53;ReadPosRankSum=-3.311;VQSLOD=2.5213;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:23:42.10:0,42,568	1/1:6,2:10:9.03:162,9,0	./.	./.	1/1:11,0:14:3.01:41,3,0	1/1:22,0:21:15.04:210,15,0	1/1:19,0:20:14.92:265,15,0	1/1:28,0:28:28.84:397,29,0	1/1:12,0:16:3.64:54,4,0	1/1:11,0:12:18.53:301,19,0	1/1:8,0:10:6.02:102,6,0	0/0:12,0:12:11.49:0,11,123	0/0:10,0:10:2.65:0,3,46	0/0:10,0:10:12.02:0,12,137	1/1:23,0:23:12.04:197,12,0	1/1:13,0:14:6.02:112,6,0	1/1:21,7:30:21.06:381,21,0	1/1:17,0:17:15.05:245,15,0	1/1:13,0:13:6.48:72,6,0	1/1:12,0:12:3.01:52,3,0	1/1:25,0:24:2.84:49,3,0	0/0:10,0:10:12.03:0,12,168	0/0:1,0:3:6.01:0,6,75	0/1:20,11:32:99:321,0,235	0/0:9,0:14:18.04:0,18,223	1/1:14,3:22:33.48:514,33,0	1/1:7,0:12:15.05:293,15,0	0/1:6,7:15:28.65:268,0,29
chr10	14696262	.	T	TAA	840.32	PASS	AB=0.967;AC=9;AF=0.161;AN=56;BaseQRankSum=1.679;DP=578;FS=1.802;HRun=14;HaplotypeScore=91.4394;InbreedingCoeff=0.5033;MQ=76.74;MQ0=0;MQRankSum=0.075;QD=7.78;ReadPosRankSum=-4.021;VQSLOD=0.3878;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:24:11.99:0,12,284	0/1:7,0:9:44.17:54,0,44	0/0:23,0:21:12.42:0,12,107	0/1:15,0:14:9.17:9,0,29	1/1:12,18:35:17.42:571,17,0	1/1:2,11:15:17.41:194,17,0	1/1:8,10:17:14.94:156,15,0	0/0:30,0:31:23.91:0,24,208	0/0:14,0:16:25.78:0,26,181	0/0:13,0:14:11.79:0,12,142	0/0:20,0:25:17.76:0,18,267	0/0:14,0:14:0.76:0,1,132	0/0:24,0:26:37.27:0,37,275	0/0:13,0:14:17.23:0,17,122	0/0:24,0:26:44.62:0,45,407	0/0:19,0:21:30.24:0,30,282	0/0:16,0:18:37.08:0,37,297	0/0:24,0:25:39.76:0,40,315	0/0:17,0:17:10.08:0,10,151	0/0:32,0:34:41.43:0,41,346	0/0:12,0:15:16.34:0,16,176	0/1:12,0:13:3.31:3,0,105	0/0:16,0:18:20.30:0,20,215	0/0:14,0:17:7.63:0,8,151	0/0:14,0:20:43.50:0,43,322	0/0:27,0:29:1.80:0,2,257	0/0:23,0:29:20.79:0,21,286	0/0:9,0:11:11.47:0,11,128
chr10	14697513	.	GT	G	2366.59	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.915;DP=712;FS=0.475;HRun=2;HaplotypeScore=67.8041;InbreedingCoeff=0.9397;MQ=78.95;MQ0=0;MQRankSum=-2.139;QD=33.33;ReadPosRankSum=-0.619;VQSLOD=3.2703;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,144,2062	0/0:11,0:11:33.11:0,33,489	0/0:20,0:20:60.12:0,60,830	0/0:15,0:15:41.57:0,42,531	1/1:2,15:18:48.15:604,48,0	1/1:0,18:18:51.17:659,51,0	1/1:0,35:35:96.31:1246,96,0	0/0:29,0:29:81.24:0,81,1157	0/0:26,0:26:78.26:0,78,1165	0/0:17,0:17:48.15:0,48,700	0/0:11,0:11:30.09:0,30,431	0/0:40,0:40:99:0,117,1752	0/0:49,0:49:99:0,147,2181	0/0:36,0:36:99:0,108,1597	0/0:27,0:27:81.25:0,81,1172	0/0:26,0:26:78.24:0,78,1124	0/0:34,0:34:99:0,99,1441	0/0:29,0:29:84.28:0,84,1258	0/0:17,0:17:51.15:0,51,735	0/0:13,0:13:36.11:0,36,514	0/0:60,0:60:99:0,169,2475	0/0:23,0:23:66.10:0,66,897	0/0:8,0:8:24.07:0,24,339	0/0:29,0:29:87.29:0,87,1303	0/0:25,0:25:75.22:0,75,1077	0/0:20,0:20:54.18:0,54,807	0/0:22,0:22:63.21:0,63,942	0/0:1,0:1:3.01:0,3,45
chr10	14702737	.	T	TA	2594.07	PASS	AB=0.933;AC=7;AF=0.125;AN=56;BaseQRankSum=-9.613;DP=727;FS=1.441;HRun=7;HaplotypeScore=69.1097;InbreedingCoeff=0.9112;MQ=80.87;MQ0=0;MQRankSum=-3.216;QD=25.68;ReadPosRankSum=0.203;VQSLOD=4.2195;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,120,1159	0/1:13,1:14:0.18:0,0,283	0/0:19,0:19:39.05:0,39,376	0/0:21,0:21:48.07:0,48,464	1/1:4,27:32:84.22:996,84,0	1/1:4,20:24:57.17:689,57,0	1/1:0,31:31:87.27:1051,87,0	0/0:36,0:36:90.12:0,90,865	0/0:25,0:25:69.11:0,69,666	0/0:29,0:29:78.12:0,78,753	0/0:20,0:20:57.09:0,57,550	0/0:26,0:26:63.09:0,63,608	0/0:27,0:27:72.11:0,72,695	0/0:25,0:25:72.07:0,72,681	0/0:35,0:35:90.14:0,90,869	0/0:28,0:28:72.10:0,72,695	0/0:29,0:29:75.12:0,75,724	0/0:13,0:13:39.03:0,39,368	0/0:18,0:18:48.05:0,48,453	0/0:26,0:26:75.12:0,75,724	0/0:29,0:29:75.11:0,75,724	0/0:18,0:18:54.07:0,54,515	0/0:24,0:24:42.50:0,42,525	0/0:28,0:28:75.07:0,75,715	0/0:26,0:26:72.12:0,72,695	0/0:34,0:34:90.14:0,90,869	0/0:31,0:31:87.12:0,87,834	0/0:18,0:18:51.08:0,51,493
chr10	14704434	.	TGG	T	4960.68	PASS	AB=1.000;AC=31;AF=0.554;AN=56;BaseQRankSum=0.083;DP=404;FS=38.524;HRun=11;HaplotypeScore=58.6284;InbreedingCoeff=0.8570;MQ=73.11;MQ0=1;MQRankSum=-0.147;QD=20.00;ReadPosRankSum=5.492;VQSLOD=1.1378;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:15:19.36:0,19,241	1/1:4,8:12:12.01:128,12,0	0/0:13,0:11:18.01:0,18,183	0/1:11,0:9:11.73:12,0,41	0/0:4,0:4:3:0,3,26	0/0:12,0:12:11.98:0,12,107	0/0:18,0:24:9.45:0,9,103	1/1:9,7:16:26.68:257,27,0	1/1:1,13:14:36.09:383,36,0	1/1:3,12:15:30.04:311,30,0	1/1:7,3:10:18.03:187,18,0	0/0:16,0:18:38.09:0,38,493	0/0:12,0:12:30.08:0,30,420	0/0:17,0:21:28.52:0,29,287	1/1:4,11:16:26.79:267,27,0	1/1:3,16:18:39.08:415,39,0	1/1:4,22:26:66.14:699,66,0	1/1:8,15:23:45.07:469,45,0	1/1:4,4:8:12.01:127,12,0	1/1:5,10:15:33.06:344,33,0	1/1:3,21:24:54.11:567,54,0	0/0:5,0:5:9.03:0,9,139	0/0:8,0:8:8.99:0,9,94	0/0:11,0:12:23.56:0,24,307	0/0:11,0:12:15.51:0,16,198	1/1:6,7:13:24.03:255,24,0	1/1:6,15:21:42.10:445,42,0	1/1:1,4:5:9.02:96,9,0
chr10	14704444	.	GGT	G	1166.05	PASS	AB=0.942;AC=17;AF=0.304;AN=56;BaseQRankSum=9.318;DP=357;FS=28.095;HRun=0;HaplotypeScore=61.2871;InbreedingCoeff=0.0635;MQ=68.26;MQ0=1;MQRankSum=-3.099;QD=5.35;ReadPosRankSum=10.018;VQSLOD=0.1605;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:24.83:0,25,295	0/1:8,0:8:7.94:28,0,8	0/0:7,0:5:14.60:0,15,142	0/0:9,0:8:11.93:0,12,106	0/0:4,0:4:6:0,6,52	0/0:7,0:7:17.34:0,17,169	0/0:16,0:16:23.96:0,24,271	0/0:18,0:18:2.61:0,3,204	0/1:16,0:16:8.64:97,0,9	0/1:15,0:15:44.44:62,0,44	0/1:5,3:8:4.76:126,0,5	0/0:13,0:13:38.96:0,39,602	0/0:15,0:15:41.13:0,41,587	0/0:11,0:11:26.81:0,27,343	0/1:15,0:15:36.23:36,0,44	0/1:19,1:19:26.66:121,0,27	1/1:24,1:25:20.83:216,21,0	1/1:17,0:17:19.24:95,19,0	0/1:8,1:9:37.39:37,0,58	1/1:12,2:15:7.66:156,8,0	0/1:28,0:28:84.61:108,0,85	0/0:6,0:6:18.02:0,18,230	0/0:4,0:4:6.02:0,6,96	0/0:14,0:14:38.94:0,39,486	0/0:6,0:6:15.05:0,15,230	0/1:12,2:14:63.86:64,0,67	0/1:18,2:20:25.91:179,0,26	0/1:8,0:8:11.33:11,0,55
chr10	14704763	.	CA	C	2261.96	PASS	AB=0.972;AC=30;AF=0.536;AN=56;BaseQRankSum=19.560;DP=640;FS=4.357;HRun=1;HaplotypeScore=106.9839;InbreedingCoeff=0.5666;MQ=81.86;MQ0=0;MQRankSum=-3.696;QD=5.52;ReadPosRankSum=4.613;VQSLOD=0.9836;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,105,1397	1/1:7,0:7:11.55:39,12,0	0/0:15,0:15:45.08:0,45,600	0/0:25,0:25:73.65:0,74,986	1/1:16,0:16:34.78:135,35,0	0/1:20,1:21:3.66:122,0,4	1/1:38,0:38:12.22:199,12,0	0/1:28,0:27:71.54:92,0,72	1/1:23,0:23:50.84:191,51,0	0/1:25,0:25:34.22:83,0,34	1/1:12,1:13:9.22:140,9,0	0/0:20,0:20:60.12:0,60,826	0/0:24,0:24:72.24:0,72,1038	0/0:31,0:31:93.31:0,93,1324	0/1:26,1:27:17.44:139,0,17	1/1:24,0:24:29.98:161,30,0	1/1:28,1:29:39.68:199,40,0	1/1:17,0:17:16.66:115,17,0	0/1:17,0:17:19.94:66,0,20	0/1:19,2:21:2.71:159,0,3	1/1:48,0:48:4.81:228,5,0	0/0:11,0:11:33.11:0,33,480	0/0:16,0:16:48.12:0,48,648	0/0:36,0:36:99:0,105,1470	0/0:17,0:17:51.15:0,51,722	1/1:25,1:26:24.26:176,24,0	1/1:20,1:21:5.91:152,6,0	1/1:9,0:9:21.01:72,21,0
chr10	14704764	.	AC	A	11191.78	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=15.391;DP=639;FS=7.757;HRun=6;HaplotypeScore=78.0092;InbreedingCoeff=0.9974;MQ=81.89;MQ0=0;MQRankSum=-3.035;QD=27.43;ReadPosRankSum=1.671;VQSLOD=5.3695;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,102,1308	1/1:0,7:7:15.04:161,15,0	0/0:15,0:15:39.11:0,39,487	0/0:25,0:25:52.70:0,53,871	1/1:0,16:16:42.10:450,42,0	1/1:2,18:20:48.10:506,48,0	1/1:3,35:38:99:1064,99,0	1/1:3,24:27:69.17:741,69,0	1/1:0,23:23:63.16:677,63,0	1/1:3,22:25:63.12:663,63,0	1/1:2,11:13:33.04:342,33,0	0/0:20,0:20:54.17:0,54,706	0/0:24,0:24:72.22:0,72,929	0/0:31,0:31:93.27:0,93,1185	1/1:4,23:27:60.14:643,60,0	1/1:1,23:24:66.16:709,66,0	1/1:2,27:29:75.19:806,75,0	1/1:1,16:17:45.11:484,45,0	1/1:3,14:17:45.11:480,45,0	1/1:5,16:21:51.13:547,51,0	1/1:4,44:48:99:1257,117,0	0/0:11,0:11:33.10:0,33,420	0/0:16,0:16:45.15:0,45,590	0/0:36,0:36:99:0,99,1300	0/0:17,0:17:48.15:0,48,618	1/1:3,23:26:72.15:761,72,0	1/1:3,18:21:57.14:612,57,0	1/1:0,9:9:27.07:290,27,0
chr10	14705123	.	TG	T	1293.87	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=6.617;DP=655;FS=7.554;HRun=9;HaplotypeScore=67.9677;InbreedingCoeff=0.7943;MQ=72.11;MQ0=0;MQRankSum=-0.772;QD=16.59;ReadPosRankSum=0.588;VQSLOD=3.4742;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:96.25:0,96,1080	0/0:6,0:6:15.04:0,15,173	0/0:20,0:19:36.95:0,37,388	0/1:15,0:15:16.75:17,0,149	1/1:1,21:22:62.99:568,63,0	1/1:2,17:19:42.02:384,42,0	1/1:4,17:22:53.06:473,53,0	0/0:22,0:22:36.08:0,36,402	0/0:27,0:27:72.18:0,72,802	0/0:35,1:36:50.75:0,51,822	0/0:14,0:14:33.08:0,33,364	0/0:27,0:27:79.40:0,79,859	0/0:30,0:30:63.17:0,63,716	0/0:21,0:21:54.15:0,54,614	0/0:24,0:24:66.17:0,66,743	0/0:30,0:30:84.18:0,84,928	0/0:24,0:24:63.19:0,63,727	0/0:25,0:25:63.12:0,63,691	0/0:18,1:19:11.61:0,12,366	0/0:17,0:17:36.11:0,36,415	0/0:37,0:37:96.23:0,96,1068	0/0:25,0:25:66.20:0,66,761	0/0:23,2:25:5.25:0,5,566	0/0:19,0:22:37.71:0,38,584	0/0:20,0:19:48.13:0,48,543	0/0:28,0:29:63.15:0,63,700	0/0:26,0:26:63.19:0,63,725	0/0:12,0:13:29.92:0,30,326
chr10	14705526	.	CAGGTAG	C	3462.33	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=10.207;DP=714;FS=0.547;HRun=0;HaplotypeScore=150.3768;InbreedingCoeff=0.9963;MQ=86.01;MQ0=0;MQRankSum=-11.527;QD=49.46;ReadPosRankSum=-1.538;VQSLOD=2.9581;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,111,3866	0/0:10,0:10:27.09:0,27,933	0/0:30,0:30:86.97:0,87,2853	0/0:20,0:20:57.17:0,57,1824	1/1:3,23:26:51.17:1157,51,0	1/1:0,19:19:42.14:1009,42,0	1/1:2,23:25:54.19:1297,54,0	0/0:32,0:32:96.33:0,96,3209	0/0:22,0:22:57.20:0,57,1980	0/0:27,0:27:81.24:0,81,2723	0/0:9,0:9:27.09:0,27,872	0/0:33,0:33:93.29:0,93,3036	0/0:28,0:28:81.28:0,81,2755	0/0:21,0:21:63.20:0,63,2134	0/0:41,0:41:99:0,120,4000	0/0:45,0:45:99:0,126,4422	0/0:37,0:37:99:0,111,3906	0/0:30,0:30:90.31:0,90,3159	0/0:12,0:12:33.09:0,33,920	0/0:16,0:16:48.14:0,48,1564	0/0:43,0:43:99:0,123,4204	0/0:20,0:20:57.20:0,57,1967	0/0:23,0:23:66.20:0,66,2220	0/0:27,0:27:81.28:0,81,2921	0/0:17,0:17:48.15:0,48,1579	0/0:29,0:29:87.29:0,87,3015	0/0:27,0:26:81.28:0,81,2814	0/0:6,0:6:18.06:0,18,629
chr10	14708212	.	C	CT	3468.81	PASS	AB=1.000;AC=37;AF=0.661;AN=56;BaseQRankSum=15.764;DP=591;FS=5.964;HRun=1;HaplotypeScore=112.7992;InbreedingCoeff=0.8782;MQ=76.26;MQ0=0;MQRankSum=-2.968;QD=9.20;ReadPosRankSum=3.217;VQSLOD=1.4151;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,123,1413	1/1:9,0:9:10.91:69,11,0	0/0:18,0:17:34.03:0,34,335	0/1:14,0:14:19.39:19,0,177	1/1:28,0:28:60.48:326,60,0	1/1:24,0:24:20.23:195,20,0	1/1:20,0:20:25.60:210,26,0	1/1:18,1:19:25.11:124,25,0	1/1:20,0:20:47.94:258,48,0	1/1:22,0:22:33.26:173,33,0	1/1:16,0:16:26.74:122,27,0	0/0:22,0:23:62.25:0,62,640	0/0:24,0:24:66.09:0,66,748	0/0:23,0:24:61.27:0,61,713	1/1:22,1:23:47.22:231,47,0	1/1:31,1:32:73.36:365,73,0	1/1:21,1:22:38.36:190,38,0	1/1:15,0:16:36.71:193,37,0	1/1:11,0:11:25.38:127,25,0	1/1:19,1:20:30.91:161,31,0	1/1:29,1:30:45.34:246,45,0	0/0:25,0:25:66.05:0,66,712	0/0:19,0:19:57.03:0,57,603	0/0:19,0:19:1.86:0,2,245	0/0:18,0:18:48.08:0,48,537	1/1:20,1:21:33.88:178,34,0	1/1:25,0:24:44.99:214,45,0	1/1:5,0:5:13.99:67,14,0
chr10	14708213	.	T	TA	9626.39	PASS	AB=1.000;AC=37;AF=0.661;AN=56;BaseQRankSum=9.480;DP=591;FS=14.338;HRun=0;HaplotypeScore=91.8845;InbreedingCoeff=0.9121;MQ=76.26;MQ0=0;MQRankSum=-1.390;QD=25.53;ReadPosRankSum=0.434;VQSLOD=4.3227;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:46:99:0,123,1488	1/1:3,6:9:15.35:237,15,0	0/0:17,0:16:34.82:0,35,396	0/1:15,0:15:2.63:3,0,217	1/1:2,26:28:74.57:829,75,0	1/1:1,23:24:44.57:568,45,0	1/1:2,17:19:38.79:552,39,0	1/1:10,8:18:47.90:475,48,0	1/1:5,16:21:59.73:607,60,0	1/1:3,21:24:65.50:642,66,0	1/1:5,10:16:39.37:359,39,0	0/0:17,0:22:65.23:0,65,666	0/0:22,0:24:69.09:0,69,806	0/0:22,0:24:61.28:0,61,740	1/1:7,16:23:61.73:599,62,0	1/1:9,23:32:92.63:957,93,0	1/1:10,11:22:49.64:435,50,0	1/1:4,13:17:51.08:583,51,0	1/1:5,5:10:29.17:236,29,0	1/1:11,9:20:56.28:503,56,0	1/1:16,14:30:71.73:716,72,0	0/0:24,0:25:66.06:0,66,753	0/0:17,0:19:57.03:0,57,628	0/0:9,0:20:1.86:0,2,254	0/0:16,0:17:48.08:0,48,557	1/1:1,19:20:53.76:548,54,0	1/1:6,18:23:57.04:617,57,0	1/1:1,4:5:14.78:162,15,0
chr10	14708223	.	C	CCT	11897.60	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=5.721;DP=630;FS=4.413;HRun=0;HaplotypeScore=114.7574;InbreedingCoeff=0.9967;MQ=80.52;MQ0=0;MQRankSum=-4.875;QD=30.12;ReadPosRankSum=0.072;VQSLOD=6.7298;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,111,1408	1/1:0,3:10:21.07:377,21,0	0/0:19,0:19:42.60:0,43,440	0/0:19,0:20:53.04:0,53,490	1/1:27,0:29:78.45:478,78,0	1/1:22,0:22:56.53:381,57,0	1/1:20,0:21:38.06:316,38,0	1/1:4,10:22:54.03:695,54,0	1/1:2,9:28:51.16:849,51,0	1/1:12,1:21:53.92:725,54,0	1/1:4,5:17:41.88:598,42,0	0/0:20,0:20:51.04:0,51,615	0/0:26,0:26:69.10:0,69,851	0/0:21,0:21:53.35:0,53,668	1/1:1,6:24:48.64:869,49,0	1/1:3,6:35:80.97:1341,81,0	1/1:2,10:22:44.94:562,45,0	1/1:12,0:23:66.06:904,66,0	1/1:2,2:11:29.85:425,30,0	1/1:2,10:24:53.85:675,54,0	1/1:2,15:32:48.16:837,48,0	0/0:28,0:28:62.89:0,63,735	0/0:20,0:20:53.83:0,54,579	0/0:18,0:18:28.90:0,29,232	0/0:20,0:20:42.04:0,42,514	1/1:13,0:24:66:792,66,0	1/1:2,4:23:51.12:880,51,0	1/1:1,0:6:14.81:193,15,0
chr10	14709935	.	GTTTC	G	326.88	PASS	AC=4;AF=0.080;AN=50;BaseQRankSum=-0.388;DP=576;FS=4.802;HRun=0;HaplotypeScore=93.6799;InbreedingCoeff=0.6744;MQ=56.69;MQ0=6;MQRankSum=-0.255;QD=5.03;ReadPosRankSum=-0.210;VQSLOD=1.8387;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:22,14:36:16.91:258,17,0	0/0:8,0:8:5.78:0,6,49	./.	./.	0/0:27,0:27:20.30:0,20,125	0/0:8,0:8:6:0,6,57	0/0:24,0:24:14.84:0,15,105	./.	0/0:22,0:21:23.79:0,24,334	0/0:20,0:20:21.06:0,21,339	0/0:13,0:13:18:0,18,215	0/0:15,0:15:24.07:0,24,478	0/0:7,0:7:5.17:0,5,20	0/0:17,0:17:27.03:0,27,438	0/0:16,0:16:30.03:0,30,339	0/0:23,0:22:9.48:0,9,129	0/0:34,0:33:17.94:0,18,159	0/0:19,0:19:21.03:0,21,318	0/0:18,0:17:3:0,3,27	0/0:26,0:26:24.08:0,24,402	0/0:19,0:18:8.98:0,9,97	0/0:11,0:11:8.95:0,9,95	0/0:17,0:17:19.43:0,19,181	1/1:22,7:27:12.04:180,12,0	0/0:33,0:33:45.11:0,45,865	0/0:44,0:43:39.95:0,40,609	0/0:23,0:23:12.47:0,12,159	0/0:19,0:17:15.05:0,15,284
chr10	14709991	.	CTTTCTTTCTTT	C	1118.38	PASS	AB=1.000;AC=15;AF=0.288;AN=52;BaseQRankSum=2.945;DP=504;FS=12.865;HRun=0;HaplotypeScore=141.5361;InbreedingCoeff=-0.1096;MQ=47.34;MQ0=59;MQRankSum=-4.722;QD=4.10;ReadPosRankSum=-1.637;VQSLOD=1.6784;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:34:61.87:0,62,1139	0/1:9,0:9:20.11:20,0,57	./.	./.	1/1:5,26:28:50.63:462,51,0	0/1:7,0:7:79.08:196,0,79	0/1:23,0:15:7.23:341,0,7	0/1:25,0:10:0.28:45,0,0	0/0:14,0:14:25.48:0,25,764	0/1:17,0:14:13.07:13,0,910	0/1:19,0:17:44.99:45,0,391	0/0:14,0:14:33.10:0,33,1247	0/1:8,0:6:34.03:34,0,73	0/0:17,0:15:45.05:0,45,1075	0/1:20,0:19:14.08:14,0,762	0/0:20,0:19:12.49:0,12,340	0/1:27,0:24:30.84:31,0,128	0/0:18,0:14:16.88:0,17,715	0/1:18,0:13:34.18:34,0,35	0/0:18,0:17:14.42:0,14,954	0/0:12,0:9:8.98:0,9,189	0/0:9,0:9:18.05:0,18,383	0/0:16,0:16:39.45:0,39,734	0/0:24,0:17:27.02:0,27,472	0/0:25,0:25:72.12:0,72,2275	0/1:34,0:32:12.01:12,0,1248	0/1:23,0:22:23.30:23,0,377	0/1:12,0:12:0.29:0,0,746
chr10	14709999	.	C	CTTTCT	3665.41	PASS	AB=0.763;AC=27;AF=0.519;AN=52;BaseQRankSum=-4.726;DP=482;FS=15.618;HRun=0;HaplotypeScore=86.2050;InbreedingCoeff=-0.0337;MQ=46.41;MQ0=57;MQRankSum=-4.928;QD=10.24;ReadPosRankSum=1.698;VQSLOD=0.8142;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:35:59.04:0,59,549	1/1:3,0:7:14.83:141,15,0	./.	./.	0/1:30,0:27:37.56:111,0,38	0/1:7,0:7:8.85:103,0,9	0/1:22,0:14:60.22:104,0,60	1/1:16,0:11:26.31:244,26,0	0/1:5,0:13:97.41:97,0,136	0/1:3,0:14:25.61:188,0,26	0/1:8,0:18:51.60:216,0,52	0/0:15,0:15:32.80:0,33,468	0/0:8,0:7:8.98:0,9,74	0/0:15,0:13:36.03:0,36,478	1/1:10,0:17:51.11:663,51,0	1/1:2,18:20:9.45:196,9,0	1/1:10,0:25:22.15:467,22,0	0/1:14,0:14:12.83:13,0,91	1/1:8,0:11:23.79:233,24,0	0/1:6,0:16:87.78:116,0,88	1/1:7,6:11:3.01:88,3,0	0/1:9,0:9:58.85:65,0,59	0/1:16,0:15:52.92:53,0,120	0/0:20,0:14:26.06:0,26,279	0/0:20,0:20:54.09:0,54,835	0/1:9,0:25:99:280,0,138	0/1:6,0:21:62.36:187,0,62	0/1:2,0:11:39.55:101,0,40
chr10	14710002	.	T	TC	1448.29	PASS	AB=0.943;AC=22;AF=0.423;AN=52;BaseQRankSum=6.543;DP=464;FS=5.417;HRun=0;HaplotypeScore=62.4906;InbreedingCoeff=-0.2372;MQ=46.20;MQ0=50;MQRankSum=-3.009;QD=4.47;ReadPosRankSum=4.971;VQSLOD=2.6682;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:36:65.37:0,65,758	0/1:9,0:8:8.15:66,0,8	./.	./.	0/1:31,0:28:25.44:268,0,25	0/1:1,5:7:8.74:148,0,9	0/1:13,8:13:69.40:214,0,69	0/1:17,0:12:36.60:37,0,38	0/1:13,0:13:20.91:21,0,118	1/1:18,0:15:20.17:76,20,0	0/1:18,0:16:65.46:65,0,67	0/0:15,0:15:33.10:0,33,445	0/0:7,0:5:12:0,12,144	0/0:14,0:12:36.10:0,36,469	1/1:18,0:17:46.12:285,46,0	0/1:19,0:18:15.42:15,0,34	0/1:28,0:25:4.23:108,0,4	0/0:18,0:13:3.86:0,4,107	0/1:15,0:10:16.23:34,0,16	0/1:17,0:16:41.74:42,0,63	1/1:10,0:7:3:28,3,0	0/1:7,2:9:33.76:34,0,131	0/1:14,0:13:29.51:30,0,219	0/0:21,0:14:26.97:0,27,275	0/0:20,0:20:54.17:0,54,737	0/1:26,0:25:68.91:69,0,127	0/1:23,0:21:39.80:40,0,61	0/1:11,0:11:4.37:31,0,4
chr10	14710246	.	GT	G	7975.83	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=6.986;DP=486;FS=0.000;HRun=8;HaplotypeScore=54.5420;InbreedingCoeff=0.9942;MQ=88.84;MQ0=0;MQRankSum=-2.631;QD=25.16;ReadPosRankSum=2.876;VQSLOD=5.4493;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:72.22:0,72,866	1/1:0,6:6:18.03:174,18,0	0/0:18,0:17:16.42:0,16,330	0/0:25,0:25:20.81:0,21,403	1/1:0,24:24:69.10:664,69,0	1/1:1,17:18:45.07:434,45,0	1/1:1,16:17:39.06:377,39,0	1/1:6,16:22:48.07:464,48,0	1/1:1,6:7:18.02:174,18,0	1/1:4,20:24:60.08:575,60,0	1/1:0,11:11:30.05:290,30,0	0/0:13,0:13:33.09:0,33,386	0/0:13,0:13:24.07:0,24,289	0/0:11,0:11:27.08:0,27,326	1/1:3,22:25:57.09:550,57,0	1/1:0,10:10:30.05:290,30,0	1/1:2,23:25:69.11:666,69,0	1/1:1,15:14:36.06:348,36,0	1/1:2,13:15:39.06:375,39,0	1/1:1,20:21:60.10:579,60,0	1/1:0,14:14:39.06:377,39,0	0/0:8,0:8:24.04:0,24,275	0/0:16,0:16:48.15:0,48,579	0/0:18,0:18:36.11:0,36,434	0/0:18,0:18:51.15:0,51,607	1/1:2,26:28:78.10:742,78,0	1/1:1,21:22:57.09:550,57,0	1/1:0,12:12:36.06:348,36,0
chr10	14710370	.	T	TGG	178.30	PASS	AB=0.958;AC=13;AF=0.232;AN=56;BaseQRankSum=-1.229;DP=442;FS=37.244;HRun=0;HaplotypeScore=91.6320;InbreedingCoeff=-0.1472;MQ=47.64;MQ0=26;MQRankSum=0.432;QD=1.00;ReadPosRankSum=-0.559;VQSLOD=-0.1256;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:21:48.51:0,49,516	1/1:3,0:2:2.90:23,3,0	0/0:36,0:6:11.95:0,12,131	0/1:29,0:11:4.01:4,0,71	0/0:28,0:28:58.04:0,58,849	0/0:22,0:22:63.14:0,63,749	0/0:16,0:16:38.29:0,38,415	0/0:16,0:16:29.24:0,29,273	0/1:8,0:8:27.87:28,0,32	0/1:10,1:11:26.61:27,0,268	0/1:12,1:12:56.11:56,0,106	0/0:11,0:11:27.07:0,27,323	0/0:14,0:14:26.99:0,27,291	0/0:10,0:10:27.04:0,27,320	0/0:17,1:18:6.41:0,6,360	0/1:20,1:20:15.12:15,0,335	0/1:18,1:16:87.11:87,0,191	0/1:13,1:13:4.26:4,0,204	0/1:8,1:8:41.32:41,0,126	0/1:11,0:11:12.02:12,0,134	0/0:4,0:4:8.21:0,8,65	0/0:12,0:12:36.08:0,36,447	0/0:11,0:11:28.96:0,29,330	0/0:23,0:22:14.56:0,15,123	0/0:13,0:12:29.74:0,30,352	0/1:20,1:20:11.96:12,0,356	0/1:19,0:16:14.32:14,0,278	0/0:8,0:7:12.53:0,13,181
chr10	14711186	.	GA	G	1820.57	PASS	AB=0.964;AC=25;AF=0.446;AN=56;BaseQRankSum=-4.227;DP=479;FS=0.000;HRun=2;HaplotypeScore=71.3144;InbreedingCoeff=0.4548;MQ=66.98;MQ0=23;MQRankSum=0.573;QD=6.46;ReadPosRankSum=-3.040;VQSLOD=-0.4376;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:24:56.61:0,57,815	0/1:7,1:8:8.66:34,0,9	0/1:17,0:10:16.80:17,0,73	0/0:11,0:7:8.34:0,8,48	0/0:28,0:26:65.94:0,66,619	0/0:14,0:14:27:0,27,264	0/0:15,0:14:37.19:0,37,333	1/1:22,0:21:27.72:251,28,0	1/1:13,0:13:12.08:139,12,0	1/1:25,1:25:26.37:316,26,0	1/1:17,1:18:2.86:117,3,0	0/0:10,0:10:23.31:0,23,280	0/0:8,0:8:21.90:0,22,250	0/0:9,0:7:21.04:0,21,268	0/1:19,0:19:2.40:127,0,2	0/1:15,1:16:1.88:73,0,2	0/1:25,1:23:4.53:140,0,5	0/1:14,0:13:25.76:52,0,26	1/1:14,1:15:11.17:98,11,0	1/1:22,1:22:1.67:135,2,0	1/1:4,1:5:5.01:61,5,0	0/0:14,0:13:33.03:0,33,354	0/0:16,0:16:43.02:0,43,511	0/0:18,0:17:45.06:0,45,551	0/0:26,0:24:56.02:0,56,739	1/1:19,2:21:3.60:145,4,0	0/1:21,1:22:7.17:133,0,7	1/1:14,3:16:4.12:171,4,0
chr10	14711188	.	A	ATT	993.38	PASS	AB=0.934;AC=11;AF=0.196;AN=56;BaseQRankSum=0.957;DP=519;FS=8.551;HRun=14;HaplotypeScore=103.3591;InbreedingCoeff=0.2158;MQ=62.49;MQ0=30;MQRankSum=-5.234;QD=5.34;ReadPosRankSum=-3.043;VQSLOD=-0.4840;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:26:39.81:0,40,395	0/0:8,0:8:13.03:0,13,132	0/1:17,0:10:8.03:12,0,8	0/0:9,0:5:2.97:0,3,24	1/1:15,13:29:50.43:570,50,0	1/1:5,11:16:27:304,27,0	0/1:9,3:14:7.88:153,0,8	0/1:24,0:23:44.62:45,0,112	0/0:14,0:14:17.59:0,18,128	0/0:29,0:28:39.93:0,40,264	0/0:21,0:20:31.83:0,32,222	0/0:8,0:10:11.56:0,12,128	0/0:8,0:9:14.66:0,15,112	0/0:10,0:7:14.91:0,15,120	0/0:19,0:19:38.42:0,38,280	0/0:16,0:16:27.94:0,28,275	0/0:26,0:24:27.03:0,27,257	0/0:15,0:13:29.75:0,30,223	0/0:20,0:17:11.15:0,11,206	0/1:26,0:25:20.47:20,0,197	0/0:5,0:5:11.72:0,12,75	0/1:14,1:15:24.51:25,0,85	0/1:12,2:15:11.58:12,0,199	0/0:19,0:19:23.93:0,24,218	0/0:26,0:26:39.95:0,40,317	0/1:25,0:25:10.59:11,0,228	0/0:25,0:25:7.87:0,8,260	0/0:18,0:17:24.32:0,24,203
chr10	14711455	.	T	TACTG	25634.58	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-3.243;DP=641;FS=30.689;HRun=0;HaplotypeScore=140.0463;InbreedingCoeff=0.9982;MQ=73.06;MQ0=8;MQRankSum=-12.992;QD=62.98;ReadPosRankSum=1.439;VQSLOD=3.6072;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:31:90.29:0,90,1662	1/1:3,9:10:21.07:484,21,0	0/0:26,0:22:51.04:0,51,926	0/0:21,0:20:56.98:0,57,989	1/1:5,23:28:54.06:1449,54,0	1/1:3,15:18:48.16:1284,48,0	1/1:6,17:23:45.15:1188,45,0	1/1:5,28:33:99:2505,99,0	1/1:5,22:26:69.24:1819,69,0	1/1:2,21:23:66.21:1695,66,0	1/1:2,16:16:36.12:968,36,0	0/0:22,0:22:60.21:0,60,1139	0/0:17,0:17:48.16:0,48,911	0/0:21,0:21:63.22:0,63,1195	1/1:8,28:35:78.27:2033,78,0	1/1:5,24:28:78.27:2081,78,0	1/1:3,13:16:39.13:1000,39,0	1/1:3,12:16:18.19:1002,18,0	1/1:2,15:18:54.18:1358,54,0	1/1:3,19:21:45.15:1211,45,0	1/1:2,20:22:48.16:1292,48,0	0/0:16,0:16:42.13:0,42,754	0/0:20,0:20:57.18:0,57,1047	0/0:32,0:31:84.29:0,84,1594	0/0:26,0:25:69.24:0,69,1310	1/1:6,25:29:84.29:2084,84,0	1/1:5,14:17:45.15:1211,45,0	1/1:0,15:12:36.12:970,36,0
chr10	14711487	.	TTCCTCCTCC	T	14022.67	PASS	AB=0.700;AC=35;AF=0.625;AN=56;BaseQRankSum=13.194;DP=612;FS=4.253;HRun=0;HaplotypeScore=212.4029;InbreedingCoeff=0.9016;MQ=44.50;MQ0=19;MQRankSum=-14.092;QD=39.95;ReadPosRankSum=-0.360;VQSLOD=4.4690;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:32:86.33:0,86,3602	1/1:1,8:9:20.85:506,21,0	0/0:38,0:9:11.91:0,12,310	0/0:37,0:16:11.22:0,11,337	1/1:25,0:25:32.83:709,33,0	1/1:19,0:19:38.95:889,39,0	1/1:19,0:19:41.94:970,42,0	1/1:20,1:20:14.97:184,15,0	1/1:10,14:24:54.07:1325,54,0	1/1:10,7:17:38.97:768,39,0	1/1:7,7:14:20.96:438,21,0	0/0:20,0:21:51.15:0,51,1853	0/0:19,0:18:45.11:0,45,1674	0/0:16,0:16:45.15:0,45,1804	1/1:11,18:29:66.06:1606,66,0	1/1:19,16:34:78:1690,78,0	1/1:11,6:17:23.85:413,24,0	0/1:8,6:13:21.95:397,0,22	1/1:12,4:14:27:504,27,0	1/1:5,11:16:36.12:946,36,0	1/1:22,2:20:28.24:236,28,0	0/0:15,0:15:30.99:0,31,1335	0/0:19,0:19:39.11:0,39,1415	0/0:40,0:37:87.18:0,87,3373	0/0:23,0:23:45.15:0,45,2016	1/1:11,15:26:54.12:1383,54,0	1/1:5,10:15:36.10:802,36,0	1/1:8,3:10:9.03:254,9,0
chr10	14711500	.	TCCTCCTCC	T	6807.53	PASS	AB=0.977;AC=20;AF=0.357;AN=56;BaseQRankSum=14.372;DP=648;FS=3.422;HRun=0;HaplotypeScore=228.5154;InbreedingCoeff=-0.2157;MQ=47.71;MQ0=23;MQRankSum=-12.726;QD=18.60;ReadPosRankSum=8.463;VQSLOD=3.3976;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:40:99:0,119,4254	0/1:10,0:10:55.61:227,0,56	0/0:45,0:15:16.52:0,17,657	0/0:27,0:10:27.08:0,27,554	1/1:9,16:25:15.47:517,15,0	0/1:8,11:19:1.41:647,0,1	1/1:9,13:22:1.56:726,2,0	0/1:20,0:19:21.14:21,0,269	0/1:24,0:24:48.03:632,0,48	0/1:23,0:22:99:329,0,247	0/1:15,0:15:99:172,0,136	0/0:25,0:25:75.24:0,75,2412	0/0:21,0:20:57.19:0,57,1995	0/0:20,0:20:60.20:0,60,2247	0/1:31,0:31:99:736,0,190	0/1:35,0:34:99:719,0,273	0/1:18,0:18:99:142,0,285	0/1:14,0:12:99:170,0,219	0/1:19,0:16:99:177,0,236	0/1:19,0:19:5.47:470,0,5	0/1:27,0:23:7.25:7,0,318	0/0:16,0:16:48.12:0,48,1615	0/0:19,0:19:54.18:0,54,1858	0/0:44,0:40:99:0,114,4198	0/0:22,0:22:66.17:0,66,2268	0/1:22,0:22:28.11:664,0,28	0/1:17,0:17:99:328,0,114	0/1:6,0:5:26.67:125,0,27
chr10	14712483	.	TACC	T	14210.63	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=14.925;DP=637;FS=5.882;HRun=0;HaplotypeScore=113.2213;InbreedingCoeff=0.9888;MQ=90.74;MQ0=0;MQRankSum=-8.758;QD=36.91;ReadPosRankSum=2.278;VQSLOD=5.9510;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:96.31:0,96,2080	1/1:1,4:5:12.04:196,12,0	0/0:26,0:26:69.22:0,69,1391	0/0:28,0:28:71.36:0,71,1470	1/1:0,10:10:21.07:342,21,0	1/1:1,13:14:33.11:538,33,0	1/1:1,34:35:72.25:1174,72,0	1/1:4,22:26:66.17:979,66,0	1/1:1,30:31:81.28:1320,81,0	1/1:1,15:16:45.15:734,45,0	1/1:1,7:8:18.06:293,18,0	0/0:44,0:44:99:0,126,2704	0/0:18,0:18:51.11:0,51,1085	0/0:27,0:27:78.27:0,78,1721	1/1:0,22:22:60.20:978,60,0	1/1:0,21:21:54.18:880,54,0	1/1:2,35:37:78.27:1261,78,0	1/1:2,27:29:66.23:1077,66,0	1/1:1,17:18:45.15:721,45,0	1/1:0,13:12:30.10:487,30,0	1/1:3,56:59:99:1797,111,0	0/0:13,0:13:39.13:0,39,860	0/0:13,0:13:36.12:0,36,764	0/0:34,0:34:96.33:0,96,2142	0/0:17,0:17:48.16:0,48,1067	1/1:4,20:24:60.19:955,60,0	1/1:1,9:10:15.05:244,15,0	1/1:1,6:7:15.05:234,15,0
chr10	14712715	.	GTTTTTTTGTTTTTTTGATTTTTTT	G	13671.22	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=11.829;DP=482;FS=17.479;HRun=0;HaplotypeScore=214.8696;InbreedingCoeff=0.8651;MQ=49.41;MQ0=14;MQRankSum=-8.848;QD=55.35;ReadPosRankSum=4.660;VQSLOD=2.7377;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,102,8684	1/1:0,9:9:6.02:238,6,0	0/0:43,0:15:18.49:0,18,753	0/0:39,0:7:18.06:0,18,280	1/1:3,23:26:21.03:846,21,0	1/1:0,16:16:27.09:1488,27,0	1/1:3,11:14:3.01:190,3,0	1/1:4,4:8:12.04:294,12,0	1/1:3,10:13:15.05:815,15,0	1/1:2,11:13:26.33:1129,26,0	1/1:2,11:13:12.04:760,12,0	0/0:17,0:17:39.12:0,39,2444	0/0:11,0:11:27.09:0,27,1938	0/0:20,0:20:40.37:0,40,3041	1/1:1,22:23:30.10:1901,30,0	1/1:2,8:10:6.02:380,6,0	1/1:4,11:13:6.02:380,6,0	1/1:0,8:8:12.04:674,12,0	1/1:0,13:13:38.87:796,39,0	1/1:1,16:17:18.06:1141,18,0	1/1:9,0:9:3.01:71,3,0	0/0:11,0:11:30.10:0,30,2208	0/0:18,0:18:54.19:0,54,4241	0/0:13,0:13:36.12:0,36,2588	0/0:21,0:20:54.19:0,54,3992	1/1:7,16:23:39.10:1426,39,0	1/1:1,9:10:6.02:380,6,0	1/1:1,6:7:12.04:760,12,0
chr10	14712722	.	T	TTG	765.26	PASS	AB=0.997;AC=12;AF=0.214;AN=56;BaseQRankSum=3.275;DP=467;FS=6.597;HRun=0;HaplotypeScore=120.9411;InbreedingCoeff=0.0411;MQ=49.71;MQ0=16;MQRankSum=0.454;QD=5.07;ReadPosRankSum=-3.471;VQSLOD=1.4079;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,102,1468	0/1:9,0:9:5.64:43,0,6	0/0:52,0:17:0.32:0,0,236	0/1:39,0:7:21.88:22,0,80	0/1:23,0:23:13.86:64,0,14	0/1:16,0:16:24.44:24,0,58	0/0:11,0:11:2.74:0,3,12	1/1:4,0:4:12.04:227,12,0	0/0:10,0:10:10.85:0,11,46	0/1:11,0:11:27.81:64,0,28	0/0:11,0:11:10.78:0,11,46	0/0:18,0:18:40.79:0,41,517	0/0:12,0:12:29.04:0,29,320	0/0:16,0:16:38.71:0,39,552	0/0:22,0:22:24.23:0,24,102	0/0:8,0:8:5.49:0,5,23	0/0:12,0:10:5.42:0,5,22	0/1:9,0:9:23.43:36,0,23	0/1:13,0:13:11.48:92,0,11	0/0:16,0:16:2.60:0,3,44	1/1:0,7:7:3.01:57,3,0	0/0:15,0:15:35.73:0,36,485	0/0:20,0:20:56.35:0,56,758	0/0:16,0:16:39.08:0,39,534	0/0:22,0:21:57.19:0,57,831	0/1:16,0:16:25.75:285,0,26	0/0:9,0:9:5.42:0,5,23	0/0:6,0:6:10.78:0,11,46
chr10	14712739	.	T	TG	514.81	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=1.576;DP=471;FS=5.067;HRun=0;HaplotypeScore=116.0571;InbreedingCoeff=0.3860;MQ=45.84;MQ0=27;MQRankSum=-2.410;QD=4.81;ReadPosRankSum=-3.927;VQSLOD=2.2112;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:85.06:0,85,1088	0/0:9,0:9:1.55:0,2,4	0/0:50,0:13:8.48:0,8,148	0/0:41,0:4:5.80:0,6,33	0/1:23,0:23:1.89:60,0,2	0/1:16,0:16:16.45:21,0,16	0/0:13,0:12:1.55:0,2,4	1/1:7,4:11:17.94:169,18,0	0/1:10,0:10:7.68:27,0,8	0/1:11,0:11:7.28:48,0,7	0/0:12,0:12:6.22:0,6,17	0/0:15,0:15:33.48:0,33,348	0/0:12,0:11:18.40:0,18,240	0/0:16,0:16:38.77:0,39,429	0/0:24,0:24:16.43:0,16,44	0/0:8,0:8:3.11:0,3,8	0/0:16,0:10:3.11:0,3,8	0/0:9,0:9:8.49:0,8,33	1/1:13,0:13:21.56:223,22,0	0/0:16,0:16:9.33:0,9,25	1/1:3,4:4:6.02:71,6,0	0/0:18,0:17:27.92:0,28,341	0/0:23,0:22:53.20:0,53,559	0/0:14,0:13:30.10:0,30,413	0/0:18,0:17:45.01:0,45,478	0/1:16,0:16:7.28:47,0,7	0/0:10,0:9:3.11:0,3,8	0/0:6,0:6:6.22:0,6,17
chr10	14713015	.	GGT	G	14918.56	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=19.731;DP=739;FS=1.256;HRun=0;HaplotypeScore=157.7954;InbreedingCoeff=0.9909;MQ=81.89;MQ0=0;MQRankSum=-5.581;QD=33.08;ReadPosRankSum=1.907;VQSLOD=6.6090;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,102,1805	1/1:2,3:5:15.05:206,15,0	0/0:21,0:21:57.20:0,57,995	0/0:27,0:27:53.53:0,54,1048	1/1:1,14:15:18.06:247,18,0	1/1:2,19:21:51.17:701,51,0	1/1:4,32:36:81.27:1113,81,0	1/1:5,23:28:69.22:930,69,0	1/1:5,29:34:90.30:1236,90,0	1/1:2,15:17:45.15:612,45,0	1/1:0,9:9:12.04:165,12,0	0/0:41,0:41:99:0,123,2143	0/0:30,0:30:90.31:0,90,1583	0/0:42,0:42:99:0,117,2075	1/1:2,32:33:81.27:1113,81,0	1/1:1,26:27:78.26:1072,78,0	1/1:3,30:33:84.28:1154,84,0	1/1:1,39:40:99:1484,108,0	1/1:2,11:13:33.11:453,33,0	1/1:2,9:11:24.08:329,24,0	1/1:6,63:69:99:1936,142,0	0/0:17,0:17:48.16:0,48,847	0/0:14,0:14:42.14:0,42,744	0/0:43,0:43:99:0,123,2172	0/0:18,0:18:51.17:0,51,892	1/1:4,26:30:81.25:1096,81,0	1/1:1,20:21:57.19:783,57,0	1/1:0,8:8:21.07:289,21,0
chr10	14713016	.	GT	G	929.69	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=21.503;DP=734;FS=1.218;HRun=1;HaplotypeScore=190.3098;InbreedingCoeff=0.4698;MQ=81.55;MQ0=0;MQRankSum=-5.544;QD=2.08;ReadPosRankSum=3.249;VQSLOD=-0.4935;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,108,1681	1/1:4,1:5:8.44:23,8,0	0/0:20,0:20:57.19:0,57,895	0/0:27,0:27:78.13:0,78,1157	1/1:15,0:15:9.33:24,9,0	0/1:21,0:21:36.41:36,0,39	1/1:36,0:36:8.13:72,8,0	0/1:26,0:26:27.74:91,0,28	1/1:33,1:34:14.25:92,14,0	1/1:17,0:17:21.93:57,22,0	1/1:9,0:9:6.22:16,6,0	0/0:41,0:41:99:0,123,1949	0/0:30,0:30:90.31:0,90,1421	0/0:40,0:40:99:0,120,1893	1/1:33,1:33:43.02:115,43,0	1/1:27,0:27:40.43:105,40,0	0/1:33,0:33:56.52:61,0,57	1/1:40,0:40:22.14:109,22,0	0/1:12,0:12:15.18:35,0,15	1/1:10,1:11:12.44:32,12,0	0/1:69,0:69:48.86:105,0,49	0/0:17,0:17:48.16:0,48,761	0/0:14,0:14:42.14:0,42,671	0/0:43,0:43:99:0,126,1978	0/0:18,0:18:54.18:0,54,849	0/1:30,0:30:56.37:87,0,56	0/1:21,0:21:4.15:44,0,4	1/1:8,0:8:10.88:28,11,0
chr10	14715186	.	T	TG	112.76	PASS	AC=12;AF=0.375;AN=32;BaseQRankSum=3.721;DP=160;FS=1.407;HRun=0;HaplotypeScore=40.8068;InbreedingCoeff=0.7144;MQ=94.21;MQ0=1;MQRankSum=0.619;QD=14.10;ReadPosRankSum=-3.721;VQSLOD=3.1891;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:26:72.24:0,72,996	1/1:0,1:1:3.01:34,3,0	0/0:14,0:13:13.08:0,13,374	0/0:7,0:5:12.02:0,12,149	./.	./.	./.	1/1:0,2:2:6.01:71,6,0	./.	./.	./.	0/0:15,0:15:38.95:0,39,542	0/0:18,0:18:50.82:0,51,680	0/0:8,0:8:18.06:0,18,250	./.	1/1:1,0:1:3:25,3,0	1/1:2,0:1:3.01:39,3,0	1/1:1,0:1:3.01:42,3,0	./.	./.	./.	0/0:15,0:15:42.13:0,42,568	0/0:14,0:14:36.11:0,36,485	0/0:15,0:15:45.10:0,45,597	0/0:16,0:15:45.15:0,45,628	./.	1/1:1,0:1:3:25,3,0	./.
chr10	14715450	.	GCACACA	G	333.96	PASS	AB=0.855;AC=7;AF=0.125;AN=56;BaseQRankSum=5.660;DP=657;FS=15.825;HRun=0;HaplotypeScore=161.7393;InbreedingCoeff=-0.1482;MQ=66.72;MQ0=13;MQRankSum=-4.966;QD=2.76;ReadPosRankSum=-1.026;VQSLOD=1.8900;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,126,4503	0/0:5,1:6:15.05:0,15,420	0/0:56,0:20:55.07:0,55,1649	0/0:57,0:26:72.24:0,72,1880	0/0:29,3:33:67.47:0,67,2458	0/0:15,3:18:9.02:0,9,1476	0/0:26,6:34:40.99:0,41,2217	0/0:28,1:28:84.29:0,84,2949	0/1:5,4:10:49.69:50,0,524	0/1:22,1:21:15.50:16,0,2057	0/0:12,1:12:27.02:0,27,943	0/0:24,0:24:72.25:0,72,2650	0/0:28,0:27:78.25:0,78,2931	0/0:28,0:28:84.27:0,84,3032	0/0:16,3:19:45.13:0,45,1584	0/0:13,1:14:33.11:0,33,1221	0/1:20,1:24:33.21:33,0,1799	0/1:10,3:13:43.67:44,0,999	0/1:12,1:13:36.94:37,0,1280	0/0:10,2:12:30.10:0,30,986	0/0:37,0:38:83.91:0,84,3021	0/0:16,0:16:45.15:0,45,1623	0/0:14,0:14:42.14:0,42,1573	0/0:36,0:35:99:0,105,3817	0/0:15,0:15:45.15:0,45,1654	0/1:21,5:26:99:248,0,2034	0/1:11,0:12:36.67:37,0,1032	0/0:3,0:3:9.03:0,9,272
chr10	14715458	.	TTG	T	1510.40	PASS	AB=0.928;AC=22;AF=0.407;AN=54;BaseQRankSum=2.754;DP=677;FS=0.000;HRun=0;HaplotypeScore=124.4695;InbreedingCoeff=0.3396;MQ=58.77;MQ0=21;MQRankSum=-0.273;QD=5.66;ReadPosRankSum=0.803;VQSLOD=2.8288;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,2:38:24.36:0,24,1281	./.	0/0:56,0:13:6.02:0,6,88	0/0:64,0:25:2.64:0,3,148	0/0:34,0:32:13.66:0,14,228	0/0:21,0:21:17.99:0,18,211	0/0:37,0:37:25.57:0,26,331	0/1:14,14:26:22.65:405,0,23	1/1:10,0:10:1.39:21,1,0	0/1:27,1:25:79.97:94,0,80	1/1:12,0:11:6.01:61,6,0	0/0:26,0:26:72.11:0,72,1033	0/0:27,1:27:26.96:0,27,849	0/0:27,1:27:35.96:0,36,951	1/1:18,1:19:7.26:75,7,0	1/1:16,0:16:14.95:160,15,0	1/1:21,1:22:1.22:150,1,0	0/1:15,0:15:69.47:69,0,76	0/1:12,0:11:2:75,0,2	1/1:14,0:13:2.99:24,3,0	1/1:39,2:41:5.52:243,6,0	0/0:16,1:17:6.18:0,6,553	0/0:16,0:16:30.10:0,30,457	0/0:32,0:31:75.24:0,75,1145	0/1:14,1:15:2.87:3,0,439	0/1:25,0:25:80:241,0,80	1/1:10,0:10:2.61:58,3,0	0/0:8,0:8:4.91:0,5,21
chr10	14715629	.	G	GA	4362.86	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=16.435;DP=505;FS=40.966;HRun=1;HaplotypeScore=126.2773;InbreedingCoeff=0.9789;MQ=77.35;MQ0=0;MQRankSum=-15.654;QD=25.82;ReadPosRankSum=0.225;VQSLOD=2.0913;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,105,1344	1/1:4,4:8:17.96:152,18,0	0/0:16,0:16:45.12:0,45,536	0/0:12,0:12:23.86:0,24,268	0/0:13,0:13:33.06:0,33,423	0/0:21,0:21:57.18:0,57,739	0/0:40,0:40:99:0,114,1466	1/1:7,4:11:18.05:202,18,0	1/1:2,7:9:27.03:264,27,0	1/1:3,15:18:51.01:532,51,0	1/1:2,1:3:5.97:50,6,0	0/0:35,0:35:99:0,99,1255	0/0:40,0:40:99:0,117,1517	0/0:34,0:34:99:0,99,1270	1/1:4,12:16:42.02:398,42,0	1/1:1,14:15:45.07:451,45,0	1/1:1,9:10:26.95:247,27,0	1/1:5,9:14:36.01:355,36,0	1/1:1,7:8:23.93:237,24,0	1/1:2,4:6:18.04:193,18,0	1/1:3,14:17:29.97:294,30,0	0/0:22,0:22:63.18:0,63,790	0/0:14,0:14:39.11:0,39,491	0/0:34,0:34:99:0,99,1285	0/0:19,0:19:57.17:0,57,725	1/1:3,15:18:51.04:555,51,0	1/1:2,9:10:30:283,30,0	1/1:1,4:5:15.03:150,15,0
chr10	14715630	.	AGTTCCTATTC	A	7844.21	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=16.039;DP=469;FS=28.465;HRun=0;HaplotypeScore=178.0426;InbreedingCoeff=0.9611;MQ=78.80;MQ0=0;MQRankSum=-14.102;QD=57.68;ReadPosRankSum=1.933;VQSLOD=2.5604;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,108,5730	1/1:4,0:4:12.04:240,12,0	0/0:15,0:15:45.15:0,45,2006	0/0:12,0:12:30.08:0,30,1149	0/0:14,0:14:39.13:0,39,1965	0/0:21,0:21:63.22:0,63,3324	0/0:39,0:39:99:0,117,5927	1/1:4,4:8:24.08:530,24,0	1/1:8,0:8:21.07:431,21,0	1/1:15,0:15:42.09:899,42,0	1/1:1,0:1:3.01:64,3,0	0/0:34,0:34:99:0,99,5298	0/0:41,0:41:99:0,123,6657	0/0:33,0:33:99:0,99,5069	1/1:12,0:12:33.11:701,33,0	1/1:14,0:14:42.14:915,42,0	1/1:9,0:9:21.07:399,21,0	1/1:12,0:12:27.09:620,27,0	1/1:7,0:7:21.07:488,21,0	1/1:4,0:4:12.04:257,12,0	1/1:15,0:15:33.11:636,33,0	0/0:22,0:22:63.22:0,63,3461	0/0:14,0:14:42.13:0,42,2112	0/0:33,0:33:99:0,99,5077	0/0:19,0:19:57.18:0,57,2822	1/1:14,0:14:41.98:849,42,0	1/1:9,0:8:27.09:553,27,0	1/1:4,0:4:12.04:264,12,0
chr10	14715631	.	GTTCCT	G	4588.08	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=16.251;DP=469;FS=30.512;HRun=0;HaplotypeScore=141.6622;InbreedingCoeff=0.9587;MQ=80.49;MQ0=0;MQRankSum=-13.466;QD=34.50;ReadPosRankSum=1.986;VQSLOD=3.1301;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,114,3675	1/1:0,4:4:12.04:153,12,0	0/0:17,0:17:47.90:0,48,1425	0/0:11,0:12:15.65:0,16,779	0/0:14,0:14:39.09:0,39,1190	0/0:21,0:21:63.20:0,63,2020	0/0:39,0:39:99:0,117,3700	1/1:4,4:8:19.78:215,20,0	1/1:0,7:7:21.07:268,21,0	1/1:1,14:15:41.93:545,42,0	1/1:0,1:1:3.01:38,3,0	0/0:34,0:34:99:0,102,3297	0/0:41,0:41:99:0,123,4075	0/0:32,0:32:96.33:0,96,3059	1/1:2,10:12:33.10:416,33,0	1/1:1,13:14:42.13:541,42,0	1/1:2,7:9:20.99:238,21,0	1/1:2,9:11:27.09:371,27,0	1/1:0,7:7:21.07:288,21,0	1/1:0,4:4:12.04:154,12,0	1/1:1,14:15:28.75:338,29,0	0/0:23,0:23:66.23:0,66,2204	0/0:13,0:13:39.13:0,39,1273	0/0:34,0:34:99:0,102,3143	0/0:18,0:18:54.19:0,54,1700	1/1:1,12:13:39.12:513,39,0	1/1:0,9:9:27.09:354,27,0	1/1:0,4:4:12.04:158,12,0
chr10	14715637	.	ATTC	A	4251.80	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=16.073;DP=463;FS=21.473;HRun=0;HaplotypeScore=122.3051;InbreedingCoeff=0.9630;MQ=82.52;MQ0=0;MQRankSum=-14.436;QD=33.48;ReadPosRankSum=1.868;VQSLOD=3.4385;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,120,2777	1/1:0,4:4:12.03:141,12,0	0/0:17,0:17:48.16:0,48,1090	0/0:14,0:14:32.66:0,33,649	0/0:13,0:13:36.12:0,36,851	0/0:21,0:21:63.22:0,63,1484	0/0:38,0:38:99:0,111,2623	1/1:4,4:8:24.02:254,24,0	1/1:0,7:7:21.06:249,21,0	1/1:0,14:14:39.13:500,39,0	1/1:0,1:1:3.01:36,3,0	0/0:32,0:32:96.33:0,96,2269	0/0:42,0:42:99:0,126,2847	0/0:33,0:33:99:0,99,2242	1/1:0,10:10:30.09:365,30,0	1/1:0,13:13:39.12:481,39,0	1/1:0,7:7:19.86:211,20,0	1/1:1,9:10:26.18:341,26,0	1/1:1,7:8:22.88:273,23,0	1/1:0,4:4:12.04:145,12,0	1/1:1,14:15:28.10:319,28,0	0/0:24,0:24:69.24:0,69,1631	0/0:12,0:12:36.12:0,36,851	0/0:33,0:33:99:0,99,2329	0/0:17,0:17:48.16:0,48,1132	1/1:0,12:12:36.12:460,36,0	1/1:0,9:9:27.06:308,27,0	1/1:1,4:5:15.02:168,15,0
chr10	14716018	.	TG	T	2543.97	PASS	AB=0.941;AC=33;AF=0.589;AN=56;BaseQRankSum=1.984;DP=445;FS=10.376;HRun=12;HaplotypeScore=56.8611;InbreedingCoeff=0.5935;MQ=72.59;MQ0=1;MQRankSum=-0.124;QD=8.86;ReadPosRankSum=6.102;VQSLOD=1.3288;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:20.37:0,20,195	1/1:0,3:3:5.98:46,6,0	0/1:7,0:7:5:5,0,9	0/0:8,0:9:5.15:0,5,48	0/0:16,1:17:0.53:0,1,183	0/0:19,0:19:27.01:0,27,258	0/1:16,2:18:5.21:5,0,129	1/1:5,5:10:2.95:23,3,0	1/1:4,10:15:28.92:215,29,0	1/1:4,6:10:14.91:114,15,0	1/1:5,6:11:11.95:93,12,0	0/0:19,1:20:1.31:0,1,174	0/0:14,0:14:15:0,15,135	0/1:22,2:24:19.38:19,0,168	1/1:3,21:24:41.33:324,41,0	1/1:4,12:17:31.92:238,32,0	1/1:7,21:29:52.79:401,53,0	1/1:7,18:27:51.87:383,52,0	1/1:6,8:15:10.92:153,11,0	1/1:5,3:8:5.97:46,6,0	1/1:16,14:32:19.86:145,20,0	0/0:9,0:9:15.01:0,15,142	0/0:7,0:7:5.92:0,6,42	0/0:20,1:20:3.80:0,4,210	0/0:11,0:11:6:0,6,54	1/1:6,7:14:19.92:145,20,0	1/1:3,15:19:43.87:331,44,0	1/1:2,2:4:5.97:46,6,0
chr10	14716796	.	A	ATC	4118.06	PASS	AB=0.828;AC=48;AF=0.889;AN=54;BaseQRankSum=-1.334;DP=666;FS=0.000;HRun=0;HaplotypeScore=133.4786;InbreedingCoeff=0.4402;MQ=65.98;MQ0=29;MQRankSum=-0.036;QD=7.63;ReadPosRankSum=1.268;VQSLOD=3.3641;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:14,30:43:18.84:964,19,0	1/1:14,0:13:7.89:44,8,0	0/0:45,0:19:4.44:0,4,30	0/0:67,0:28:6.01:0,6,75	./.	1/1:27,0:26:2.60:10,3,0	1/1:26,0:23:3:26,3,0	1/1:40,0:38:22.93:91,23,0	1/1:15,0:14:13.45:63,13,0	1/1:20,0:17:17.85:62,18,0	0/1:17,0:16:0:0,0,0	1/1:9,13:21:30.10:448,30,0	1/1:6,10:16:15.05:224,15,0	0/1:9,10:19:10.32:301,0,10	1/1:26,0:24:12.30:57,12,0	1/1:23,0:23:11.85:88,12,0	1/1:25,0:22:15.16:52,15,0	1/1:20,0:19:13.55:64,14,0	1/1:15,0:15:15.58:69,16,0	1/1:13,0:12:4.99:19,5,0	1/1:45,0:38:10.24:40,10,0	1/1:6,9:14:24:342,24,0	1/1:7,6:13:6.02:93,6,0	1/1:13,17:30:22.79:669,23,0	1/1:4,9:13:17.26:277,17,0	1/1:18,0:15:17.50:71,17,0	1/1:13,0:11:12.27:41,12,0	1/1:11,0:11:2.13:6,2,0
chr10	14716822	.	CTTTTT	C	2999.83	PASS	AB=0.700;AC=28;AF=0.519;AN=54;BaseQRankSum=2.651;DP=562;FS=6.400;HRun=6;HaplotypeScore=128.6118;InbreedingCoeff=0.5096;MQ=60.47;MQ0=43;MQRankSum=-7.903;QD=9.97;ReadPosRankSum=-1.218;VQSLOD=-0.4676;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:53:99:0,132,3293	1/1:1,10:11:7.73:122,8,0	0/0:35,0:13:34.59:0,35,619	0/0:50,0:17:35.80:0,36,536	./.	1/1:3,7:9:2.92:17,3,0	0/1:9,15:20:5.43:170,0,5	1/1:6,20:25:57.20:736,57,0	0/1:10,7:17:13.76:115,0,14	0/1:8,1:9:11.75:147,0,12	0/1:8,4:12:0.01:0,0,0	0/0:16,0:17:41.74:0,42,1079	0/0:16,0:16:30.10:0,30,777	0/0:17,0:17:42.62:0,43,1141	0/1:13,12:24:10.72:11,0,31	0/1:13,2:16:36.57:134,0,37	1/1:17,2:18:3.46:167,3,0	1/1:12,2:14:1.48:179,1,0	1/1:3,7:11:12.10:250,12,0	1/1:4,5:8:5.37:54,5,0	1/1:24,3:30:10.80:54,11,0	0/0:12,0:11:31.29:0,31,709	0/0:8,0:8:9.03:0,9,235	0/0:30,0:30:81.27:0,81,2078	0/0:12,0:12:30.10:0,30,679	1/1:5,7:11:26.04:292,26,0	1/1:10,9:16:26.59:343,27,0	1/1:1,4:7:21.06:398,21,0
chr10	14717870	.	C	CTT	2186.48	PASS	AB=0.579;AC=50;AF=0.893;AN=56;BaseQRankSum=-0.432;DP=707;FS=10.328;HRun=12;HaplotypeScore=120.2489;InbreedingCoeff=0.3594;MQ=60.37;MQ0=1;MQRankSum=-4.956;QD=3.26;ReadPosRankSum=-1.969;VQSLOD=-0.5968;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:10,0:47:36.29:125,36,0	1/1:10,0:14:3:29,3,0	0/0:16,0:18:33.71:0,34,214	0/0:13,0:8:15.11:0,15,142	1/1:22,0:21:6.87:19,7,0	1/1:17,0:17:10.30:50,10,0	1/1:14,0:13:5.50:36,5,0	1/1:30,0:27:17.72:127,18,0	1/1:23,1:37:6.01:58,6,0	1/1:18,0:27:22.16:126,22,0	1/1:28,0:28:17.63:65,18,0	1/1:8,0:28:1.66:100,2,0	1/1:12,1:35:10.64:153,11,0	1/1:3,1:23:1.66:103,2,0	1/1:25,0:25:9.32:27,9,0	1/1:30,0:30:20.24:76,20,0	1/1:9,0:22:3.45:23,3,0	1/1:16,0:16:12.11:81,12,0	1/1:16,0:22:20.71:137,21,0	1/1:16,1:31:19.55:169,20,0	1/1:19,0:18:10.82:93,11,0	1/1:3,0:24:3.15:79,3,0	0/1:7,2:21:1.27:118,0,1	0/1:9,1:43:13.56:192,0,14	1/1:10,0:26:24.27:83,24,0	1/1:31,0:31:24.76:134,25,0	1/1:20,0:20:10.77:67,11,0	1/1:5,2:16:5.96:50,6,0
chr10	14718597	.	ACAGCTCTTGCCTGCCTTCATCCAAACTGCTCTTAGAAACTTGGACTCCAG	A	5222.41	PASS	AC=26;AF=0.500;AN=52;BaseQRankSum=5.846;DP=370;FS=0.000;HRun=0;HaplotypeScore=433.0996;InbreedingCoeff=0.7697;MQ=106.27;MQ0=0;MQRankSum=-5.015;QD=111.12;ReadPosRankSum=0.149;VQSLOD=2.4297;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,123,21233	./.	0/0:25,0:25:75.12:0,75,4916	0/0:22,0:23:66.06:0,66,4232	0/0:18,0:18:54.19:0,54,9110	0/0:23,0:23:69.24:0,69,8745	0/0:27,0:27:81.24:0,81,9180	1/1:2,0:2:6.02:108,6,0	1/1:0,8:8:6.02:768,6,0	1/1:1,0:1:3:29,3,0	1/1:1,0:1:0.47:1,0,0	0/0:27,0:27:81.21:0,81,9108	0/0:18,0:18:54.19:0,54,8460	0/0:29,0:29:87.28:0,87,12327	1/1:0,4:4:3.01:384,3,0	1/1:0,5:5:6.02:769,6,0	1/1:3,0:3:9.03:174,9,0	1/1:0,3:3:6.02:768,6,0	1/1:5,0:5:12.01:108,12,0	1/1:0,4:4:9.03:922,9,0	./.	0/0:14,0:14:42.11:0,42,5650	0/0:15,0:15:45.15:0,45,6513	0/0:22,0:22:60.18:0,60,8783	0/0:39,0:38:99:0,117,18070	1/1:0,3:3:6.02:423,6,0	1/1:0,6:6:3.01:385,3,0	1/1:0,2:2:3.01:384,3,0
chr10	14718646	.	AG	A	543.91	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=8.376;DP=404;FS=0.000;HRun=2;HaplotypeScore=66.4905;InbreedingCoeff=0.7402;MQ=97.53;MQ0=0;MQRankSum=-4.603;QD=9.71;ReadPosRankSum=-0.835;VQSLOD=0.9400;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,147,2158	1/1:2,0:2:2.98:22,3,0	0/0:23,0:23:66.65:0,67,947	0/0:20,0:20:60.13:0,60,825	0/0:28,0:28:84.28:0,84,1240	0/0:19,0:19:57.19:0,57,854	0/0:27,0:27:81.25:0,81,1174	1/1:0,3:3:9.03:105,9,0	1/1:8,0:8:5.49:24,5,0	1/1:0,3:3:9.01:101,9,0	1/1:0,5:5:12.04:156,12,0	0/0:24,0:24:72.24:0,72,1077	0/0:32,0:32:96.32:0,96,1425	0/0:26,0:26:78.26:0,78,1161	1/1:4,0:4:2.74:12,3,0	1/1:5,0:5:5.49:24,5,0	1/1:0,5:5:3.01:37,3,0	1/1:3,0:3:5.49:23,5,0	1/1:0,1:1:3.01:35,3,0	1/1:4,0:4:8.76:89,9,0	1/1:0,2:2:3.01:39,3,0	0/0:17,0:17:45.14:0,45,644	0/0:16,0:16:42.09:0,42,564	0/0:30,0:30:90.30:0,90,1345	0/0:37,0:36:99:0,111,1623	1/1:3,0:3:5.75:50,6,0	1/1:6,0:6:2.31:11,2,0	1/1:2,0:2:2.74:12,3,0
chr10	14719076	.	A	AAAAG	24758.06	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=5.342;DP=712;FS=16.772;HRun=0;HaplotypeScore=127.9299;InbreedingCoeff=0.9884;MQ=72.69;MQ0=0;MQRankSum=-4.735;QD=67.28;ReadPosRankSum=-1.883;VQSLOD=5.2759;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,120,2230	1/1:1,13:14:36.12:919,36,0	0/0:9,0:9:7.74:0,8,78	0/0:20,0:21:18.02:0,18,223	0/0:21,0:21:60.21:0,60,1116	0/0:27,0:27:81.28:0,81,1512	0/0:21,0:21:63.22:0,63,1176	1/1:11,23:36:93.31:2328,93,0	1/1:2,13:15:39.13:1027,39,0	1/1:4,23:27:72.21:1883,72,0	1/1:1,12:14:33.11:837,33,0	0/0:35,0:35:99:0,99,1774	0/0:28,0:28:81.28:0,81,1501	0/0:29,0:29:81.28:0,81,1490	1/1:4,28:31:93.32:2436,93,0	1/1:4,19:24:60.21:1548,60,0	1/1:5,28:34:78.27:2071,78,0	1/1:3,20:23:60.21:1600,60,0	1/1:8,16:27:72.20:1656,72,0	1/1:4,16:20:60.21:1576,60,0	1/1:4,24:29:60.21:1544,60,0	0/0:17,0:17:45.12:0,45,747	0/0:34,0:34:99:0,99,1816	0/0:32,0:32:96.32:0,96,1761	0/0:29,0:29:81.27:0,81,1451	1/1:4,32:39:99:2775,111,0	1/1:6,17:22:66.23:1758,66,0	1/1:1,10:11:30.10:800,30,0
chr10	14719328	.	T	TC	14815.55	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-12.501;DP=729;FS=7.167;HRun=2;HaplotypeScore=74.6105;InbreedingCoeff=0.9936;MQ=83.66;MQ0=0;MQRankSum=-5.808;QD=38.68;ReadPosRankSum=0.352;VQSLOD=5.1653;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,126,1528	1/1:0,5:5:12.04:170,12,0	0/0:22,0:22:57.14:0,57,668	0/0:24,0:24:62.81:0,63,728	0/0:14,0:14:36.11:0,36,441	0/0:21,0:21:63.17:0,63,757	0/0:38,0:38:99:0,111,1352	1/1:3,24:27:66.20:914,66,0	1/1:0,28:28:81.27:1165,81,0	1/1:0,30:30:90.30:1293,90,0	1/1:0,19:19:57.19:820,57,0	0/0:29,0:29:84.21:0,84,1022	0/0:28,0:28:84.22:0,84,1002	0/0:27,0:27:75.23:0,75,919	1/1:1,34:35:90.73:1271,91,0	1/1:0,26:26:69.23:993,69,0	1/1:1,39:40:99:1485,105,0	1/1:1,28:30:87.29:1234,87,0	1/1:1,17:18:51.17:733,51,0	1/1:3,14:17:39.13:554,39,0	1/1:3,55:58:99:2118,156,0	0/0:18,0:18:54.17:0,54,669	0/0:20,0:20:57.15:0,57,676	0/0:29,0:29:84.26:0,84,1029	0/0:32,0:32:87.26:0,87,1067	1/1:0,24:24:69.23:992,69,0	1/1:1,19:21:60.20:856,60,0	1/1:0,5:5:15.05:216,15,0
chr10	14719423	.	ACGTCC	A	10619.73	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=19.837;DP=639;FS=1.398;HRun=0;HaplotypeScore=180.8569;InbreedingCoeff=0.9694;MQ=84.65;MQ0=0;MQRankSum=-19.423;QD=39.19;ReadPosRankSum=0.856;VQSLOD=5.0132;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,132,4082	1/1:0,7:7:18.06:294,18,0	0/0:22,0:22:61.72:0,62,1735	0/0:32,0:32:78.27:0,78,2063	0/0:12,0:12:36.12:0,36,1125	0/0:24,0:24:72.20:0,72,2086	0/0:33,0:33:99:0,99,3104	1/1:3,18:23:54.28:899,54,0	1/1:2,27:29:81.26:1292,81,0	1/1:1,15:16:42.14:722,42,0	1/1:1,3:4:3.01:42,3,0	0/0:32,0:32:93.32:0,93,2969	0/0:37,0:37:99:0,105,3167	0/0:32,0:32:96.29:0,96,2900	1/1:4,28:32:90.28:1425,90,0	1/1:3,21:24:60.20:979,60,0	1/1:4,18:22:45.15:756,45,0	1/1:8,17:25:54.18:900,54,0	1/1:3,8:11:24.04:385,24,0	1/1:2,6:8:18.06:282,18,0	1/1:10,22:32:63.60:960,64,0	0/0:18,0:18:54.19:0,54,1717	0/0:15,0:15:42.14:0,42,1182	0/0:36,0:36:99:0,108,3220	0/0:30,0:30:87.30:0,87,2803	1/1:3,16:19:51.17:886,51,0	1/1:2,13:15:36.12:595,36,0	1/1:0,4:4:12.04:205,12,0
chr10	14719430	.	ATT	A	7113.39	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=20.205;DP=618;FS=1.367;HRun=2;HaplotypeScore=155.1754;InbreedingCoeff=0.9717;MQ=85.77;MQ0=0;MQRankSum=-19.109;QD=28.92;ReadPosRankSum=0.253;VQSLOD=4.4826;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,132,2664	1/1:1,7:8:21.05:231,21,0	0/0:26,0:26:75.26:0,75,1448	0/0:29,0:29:75.19:0,75,1408	0/0:14,0:14:42.14:0,42,853	0/0:24,0:24:72.25:0,72,1452	0/0:34,0:34:99:0,102,2025	1/1:2,18:20:57.15:637,57,0	1/1:3,27:30:86.89:861,87,0	1/1:0,15:15:42.12:468,42,0	1/1:0,3:3:2.99:24,3,0	0/0:33,0:33:99:0,99,1953	0/0:33,0:33:99:0,99,2011	0/0:31,0:31:93.30:0,93,1847	1/1:2,28:30:90.19:942,90,0	1/1:1,21:22:63.11:645,63,0	1/1:4,18:22:51.10:535,51,0	1/1:2,17:19:54.12:577,54,0	1/1:0,8:8:21.53:241,22,0	1/1:0,6:6:18.01:173,18,0	1/1:3,22:25:57.48:557,57,0	0/0:21,0:21:63.22:0,63,1261	0/0:16,0:16:45.15:0,45,888	0/0:38,0:38:99:0,114,2313	0/0:29,0:29:87.30:0,87,1754	1/1:2,16:18:54.16:638,54,0	1/1:2,13:15:42.06:426,42,0	1/1:1,4:5:15.03:157,15,0
chr10	14721246	.	TTGTGTGTGTG	T	3065.32	PASS	AB=0.667;AC=45;AF=0.938;AN=48;BaseQRankSum=2.575;DP=593;FS=0.000;HRun=0;HaplotypeScore=194.7794;InbreedingCoeff=0.2348;MQ=61.06;MQ0=16;MQRankSum=-1.699;QD=6.78;ReadPosRankSum=3.206;VQSLOD=2.4250;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	1/1:11,0:11:6.49:140,6,0	./.	./.	1/1:12,0:20:8.96:209,9,0	./.	1/1:19,0:19:3.01:70,3,0	0/0:37,0:35:4.83:0,5,90	1/1:22,0:22:15.05:349,15,0	1/1:23,0:23:1.50:58,2,0	1/1:16,0:16:6.02:139,6,0	1/1:19,8:27:8.25:245,8,0	1/1:4,5:9:9.03:266,9,0	1/1:11,9:20:6.02:177,6,0	1/1:28,0:28:15.05:344,15,0	1/1:19,0:19:6.02:139,6,0	1/1:22,0:22:3.01:70,3,0	1/1:28,0:28:2.60:69,3,0	1/1:21,0:21:6.02:139,6,0	1/1:14,0:15:6.02:139,6,0	1/1:32,0:28:0.86:2,1,0	1/1:20,0:19:5.97:46,6,0	0/1:6,6:12:0.27:1,0,0	1/1:23,9:32:0.62:1,1,0	1/1:5,6:11:3.01:70,3,0	1/1:12,0:12:3.01:70,3,0	1/1:13,0:13:9.03:202,9,0	1/1:16,0:15:9.03:209,9,0
chr10	14721273	.	TGTGTGTGTGTGTGTGTGTGTGTGC	T	5841.42	PASS	AB=0.991;AC=24;AF=0.429;AN=56;BaseQRankSum=7.837;DP=585;FS=9.166;HRun=0;HaplotypeScore=268.4186;InbreedingCoeff=0.2265;MQ=45.80;MQ0=26;MQRankSum=-2.637;QD=16.79;ReadPosRankSum=2.783;VQSLOD=1.5348;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:20.95:0,21,836	1/1:7,0:7:7.13:279,7,0	0/0:10,0:4:6.02:0,6,76	0/0:21,0:5:15.05:0,15,455	0/1:18,0:18:64.67:399,0,65	0/0:13,0:10:18.04:0,18,221	0/1:21,0:20:62.67:297,0,63	0/1:27,0:24:86.43:86,0,410	1/1:18,1:19:15.05:751,15,0	0/1:28,0:27:99:306,0,150	1/1:16,1:17:6.91:338,7,0	0/0:35,0:34:57.09:0,57,2247	0/0:16,0:15:31.14:0,31,1310	0/0:28,0:28:34.35:0,34,1253	1/1:25,1:26:14.40:684,14,0	1/1:18,0:18:6.02:276,6,0	0/1:20,1:21:91.76:254,0,92	0/1:21,0:21:37.21:127,0,37	1/1:24,0:22:27.04:529,27,0	0/1:16,0:16:5.40:282,0,5	0/1:30,0:22:16.71:17,0,85	0/0:23,0:22:25.46:0,25,1390	0/0:14,0:14:14.52:0,15,545	0/0:30,0:29:27.05:0,27,962	0/0:16,0:15:15.05:0,15,696	0/1:21,1:21:10.17:365,0,10	1/1:18,1:18:8.26:466,8,0	0/1:14,0:13:8.95:384,0,9
chr10	14721275	.	TGTGTGTGTGTGTGTGTGTGTGC	T	7631.67	PASS	AB=0.911;AC=29;AF=0.518;AN=56;BaseQRankSum=6.548;DP=555;FS=2.310;HRun=0;HaplotypeScore=232.7243;InbreedingCoeff=0.5062;MQ=46.40;MQ0=26;MQRankSum=-4.021;QD=23.92;ReadPosRankSum=3.307;VQSLOD=3.4105;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:20.96:0,21,651	1/1:1,5:6:7.27:371,7,0	0/0:9,0:3:5.58:0,6,32	0/0:22,0:5:14.92:0,15,330	0/1:11,0:11:28.47:434,0,28	0/0:13,0:10:23.89:0,24,195	0/1:15,0:14:91.85:167,0,92	0/1:25,0:22:99:193,0,158	1/1:4,12:16:15.05:901,15,0	0/1:5,21:25:55.65:535,0,56	1/1:5,12:17:9.03:385,9,0	0/0:35,0:34:57.36:0,57,1855	0/0:15,0:14:28.10:0,28,1084	0/0:28,0:28:31.31:0,31,988	1/1:5,20:25:14.35:915,14,0	1/1:2,15:17:6.02:369,6,0	1/1:20,0:20:4.16:363,4,0	1/1:4,16:20:0.27:180,0,0	1/1:3,20:21:56.58:751,57,0	1/1:3,12:15:11.95:410,12,0	0/1:28,0:20:31.16:31,0,33	0/0:21,0:20:25.41:0,25,1156	0/0:15,0:15:17.37:0,17,492	0/0:30,0:29:23.68:0,24,737	0/0:16,0:15:15.02:0,15,572	1/1:21,0:20:53.56:567,54,0	1/1:3,17:19:8.24:524,8,0	1/1:3,11:13:9.03:535,9,0
chr10	14723239	.	TAAAC	T	9650.29	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-13.467;DP=738;FS=0.000;HRun=0;HaplotypeScore=137.4103;InbreedingCoeff=0.9698;MQ=63.33;MQ0=1;MQRankSum=1.326;QD=26.22;ReadPosRankSum=-0.245;VQSLOD=4.4676;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,108,2451	1/1:6,4:10:3.01:49,3,0	0/0:24,0:20:13.36:0,13,382	0/0:25,0:20:34.58:0,35,518	0/0:3,0:22:59.83:0,60,773	0/0:10,0:20:15.05:0,15,283	0/0:15,0:39:42.13:0,42,724	1/1:13,17:30:51.07:675,51,0	1/1:8,17:25:33.11:543,33,0	1/1:8,21:29:63.15:914,63,0	1/1:8,16:24:41.66:547,42,0	0/0:31,0:31:69.04:0,69,1328	0/0:34,0:34:63.15:0,63,1243	0/0:34,0:34:84.25:0,84,1845	1/1:4,19:23:42.14:690,42,0	1/1:7,29:36:65.97:1085,66,0	1/1:6,19:25:45.15:730,45,0	1/1:8,21:29:45.15:731,45,0	1/1:12,14:26:42.08:589,42,0	1/1:6,17:23:47.92:667,48,0	1/1:7,20:27:33.11:543,33,0	0/0:24,0:24:63.21:0,63,1451	0/0:11,0:11:21.07:0,21,507	0/0:36,0:36:90.25:0,90,1965	0/0:20,0:20:48.13:0,48,1022	1/1:4,22:26:66.17:1001,66,0	1/1:7,17:24:27.09:444,27,0	1/1:0,11:11:27.09:444,27,0
chr10	14726663	.	AT	A	3049.23	PASS	AB=0.944;AC=18;AF=0.321;AN=56;BaseQRankSum=5.730;DP=600;FS=37.510;HRun=11;HaplotypeScore=84.3731;InbreedingCoeff=0.8120;MQ=74.97;MQ0=0;MQRankSum=1.016;QD=14.12;ReadPosRankSum=6.682;VQSLOD=1.2898;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:13,30:44:91.83:745,92,0	0/0:10,0:10:21.05:0,21,224	0/0:14,1:14:1.04:0,1,159	0/1:15,0:14:9.85:10,0,68	0/0:11,0:24:46.73:0,47,244	0/0:8,0:18:40.48:0,40,215	0/0:7,0:27:63.04:0,63,346	0/0:30,1:31:57.12:0,57,594	0/0:24,0:24:63.10:0,63,635	0/0:17,0:17:39.05:0,39,389	0/0:7,0:9:20.63:0,21,162	1/1:2,16:20:51.35:405,51,0	1/1:4,25:29:49.74:522,50,0	1/1:6,15:21:41.92:344,42,0	0/0:22,1:23:38.48:0,38,595	0/0:29,0:29:78.16:0,78,811	0/0:27,0:27:78.18:0,78,823	0/0:27,0:27:75.14:0,75,780	0/0:28,0:28:75.10:0,75,740	0/0:12,0:12:33.07:0,33,339	0/0:25,0:25:51.08:0,51,519	1/1:5,15:20:31.60:289,32,0	1/1:2,11:13:26.81:222,27,0	1/1:4,19:23:53.92:443,54,0	1/1:5,10:15:32.92:271,33,0	0/0:16,0:16:36.06:0,36,360	0/0:20,2:22:1.84:0,2,424	0/1:14,2:16:0.93:1,0,373
chr10	14726769	.	CA	C	17427.67	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=13.652;DP=807;FS=9.856;HRun=2;HaplotypeScore=79.3901;InbreedingCoeff=0.9988;MQ=83.62;MQ0=0;MQRankSum=-4.429;QD=35.64;ReadPosRankSum=2.159;VQSLOD=5.0623;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,138,2025	1/1:0,8:8:21.07:272,21,0	0/0:25,0:25:72.22:0,72,1033	0/0:21,0:21:48.60:0,49,670	1/1:0,33:33:93.30:1207,93,0	1/1:0,25:25:72.23:935,72,0	1/1:1,31:32:81.26:1052,81,0	1/1:1,24:25:69.20:870,69,0	1/1:1,27:28:75.24:973,75,0	1/1:2,28:30:78.25:1012,78,0	1/1:0,30:30:90.29:1168,90,0	0/0:37,0:37:99:0,111,1662	0/0:32,0:32:90.30:0,90,1336	0/0:30,0:30:90.30:0,90,1327	1/1:1,28:29:78.25:1012,78,0	1/1:0,26:26:69.22:895,69,0	1/1:0,40:40:99:1440,111,0	1/1:0,37:37:99:1363,105,0	1/1:2,25:27:72.22:922,72,0	1/1:0,25:25:72.17:914,72,0	1/1:0,41:41:99:1402,108,0	0/0:27,0:27:78.24:0,78,1131	0/0:26,0:26:75.23:0,75,1085	0/0:45,0:45:99:0,132,1978	0/0:29,0:29:87.29:0,87,1285	1/1:1,27:28:81.21:1016,81,0	1/1:0,18:18:54.18:701,54,0	1/1:0,7:7:21.07:273,21,0
chr10	14727353	.	C	CTG	324.28	PASS	AB=0.594;AC=3;AF=0.054;AN=56;BaseQRankSum=3.118;DP=561;FS=4.634;HRun=0;HaplotypeScore=85.1651;InbreedingCoeff=0.1123;MQ=57.76;MQ0=24;MQRankSum=3.195;QD=4.84;ReadPosRankSum=4.149;VQSLOD=2.0957;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:34:48.60:0,49,406	0/0:8,0:8:20.88:0,21,162	0/0:22,0:11:6.26:0,6,58	0/0:24,0:10:5.42:0,5,93	0/1:7,8:14:2.71:81,0,3	0/1:8,19:27:54.91:193,0,55	0/1:4,19:24:18.31:149,0,18	0/0:24,0:21:44.48:0,44,343	0/0:23,0:23:18.87:0,19,234	0/0:23,0:22:47.65:0,48,449	0/0:8,0:8:8.66:0,9,74	0/0:24,0:24:31.99:0,32,245	0/0:14,0:12:25.86:0,26,214	0/0:20,0:18:14.12:0,14,156	0/0:23,0:22:30.28:0,30,246	0/0:25,0:25:20.48:0,20,379	0/0:30,0:28:48.52:0,49,343	0/0:17,0:17:32.09:0,32,249	0/0:16,0:15:15.52:0,16,149	0/0:8,0:8:11.72:0,12,100	0/0:22,0:20:35.95:0,36,300	0/0:13,0:13:14.98:0,15,125	0/0:19,0:19:38.84:0,39,307	0/0:34,0:30:45.27:0,45,368	0/0:12,0:11:20.93:0,21,171	0/0:20,0:19:40.95:0,41,312	0/0:15,0:13:32.14:0,32,262	0/0:14,0:13:30.34:0,30,236
chr10	14729428	.	A	AC	6688.18	PASS	AB=0.605;AC=29;AF=0.518;AN=56;BaseQRankSum=-13.979;DP=613;FS=17.417;HRun=8;HaplotypeScore=66.9444;InbreedingCoeff=0.8827;MQ=83.67;MQ0=0;MQRankSum=-0.615;QD=21.79;ReadPosRankSum=1.626;VQSLOD=3.6413;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:65.99:0,66,595	1/1:1,3:4:6.02:69,6,0	0/0:19,0:19:28.38:0,28,332	0/0:22,0:22:40.16:0,40,320	0/0:25,0:25:66.02:0,66,602	0/0:21,0:21:51.01:0,51,466	0/0:30,0:30:78:0,78,703	1/1:12,19:30:26.68:551,27,0	1/1:1,12:13:21.06:242,21,0	1/1:1,14:15:39.11:441,39,0	1/1:5,12:17:2.45:284,2,0	0/0:26,0:26:66:0,66,598	0/0:24,0:24:60.01:0,60,547	0/0:24,0:24:57:0,57,515	1/1:4,23:27:31.09:566,31,0	1/1:2,26:28:54.16:623,54,0	1/1:2,25:27:69.21:796,69,0	0/1:9,17:26:9.79:405,0,10	1/1:9,15:25:53.94:577,54,0	1/1:1,16:17:33.06:366,33,0	1/1:6,29:35:63.19:726,63,0	0/0:31,0:31:72.01:0,72,659	0/0:8,0:8:18:0,18,164	0/0:32,0:32:81.02:0,81,739	0/0:16,0:16:26.99:0,27,247	1/1:4,16:20:14.66:419,15,0	1/1:0,17:17:45:519,45,0	1/1:0,5:5:9.03:104,9,0
chr10	14731635	.	A	AC	2301.22	PASS	AB=0.793;AC=38;AF=0.704;AN=54;BaseQRankSum=-0.190;DP=440;FS=5.528;HRun=10;HaplotypeScore=63.8813;InbreedingCoeff=0.0052;MQ=76.72;MQ0=0;MQRankSum=-1.145;QD=5.75;ReadPosRankSum=-3.229;VQSLOD=0.7195;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:15,6:21:2.56:181,3,0	0/1:4,0:4:0:0,0,0	0/1:14,0:12:6.24:6,0,71	0/1:15,0:16:45.24:45,0,95	0/1:13,0:13:6.97:7,0,105	0/0:11,0:11:20.93:0,21,169	0/0:21,0:23:46.01:0,46,356	1/1:14,6:21:6.49:64,6,0	1/1:21,1:23:4.52:183,5,0	1/1:3,0:9:6.43:46,6,0	./.	0/1:8,17:25:37.86:243,0,38	0/1:10,4:14:0.62:178,0,1	0/1:8,13:21:9.74:91,0,10	0/1:15,0:16:2.31:106,0,2	0/1:5,2:18:6.81:100,0,7	0/1:4,1:18:8.67:9,0,19	1/1:5,14:19:13.80:132,14,0	1/1:12,6:20:29.56:242,30,0	1/1:9,0:9:9.93:79,10,0	1/1:21,1:23:10.23:68,10,0	1/1:4,2:6:3.01:32,3,0	0/1:7,3:10:23.54:24,0,32	1/1:10,22:32:8.45:295,8,0	0/1:6,6:12:15.36:46,0,15	1/1:5,9:14:14.96:127,15,0	1/1:10,1:11:14.27:114,14,0	1/1:8,1:11:4.72:37,5,0
chr10	14735325	.	AG	A	7160.71	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-9.275;DP=724;FS=8.906;HRun=4;HaplotypeScore=102.4073;InbreedingCoeff=0.9993;MQ=85.21;MQ0=0;MQRankSum=-4.081;QD=31.41;ReadPosRankSum=5.083;VQSLOD=4.4269;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,39:43:99:1332,111,0	0/0:14,0:14:42.14:0,42,587	0/0:20,0:20:46.25:0,46,688	0/0:26,0:26:62.46:0,62,843	0/0:19,0:19:54.17:0,54,739	0/0:22,0:22:66.19:0,66,904	0/0:36,0:36:99:0,108,1513	0/0:15,0:15:45.14:0,45,616	0/0:31,0:31:87.27:0,87,1184	0/0:27,0:27:75.25:0,75,1050	0/0:14,0:14:42.13:0,42,569	1/1:3,32:35:87.26:1044,87,0	1/1:1,35:36:93.29:1115,93,0	1/1:1,32:33:90.28:1078,90,0	0/0:26,0:26:78.26:0,78,1084	0/0:29,0:29:81.27:0,81,1129	0/0:28,0:28:84.25:0,84,1128	0/0:34,0:34:96.31:0,96,1325	0/0:20,0:20:51.16:0,51,696	0/0:17,0:17:48.16:0,48,672	0/0:61,0:61:99:0,177,2386	1/1:0,22:22:63.19:756,63,0	1/1:0,19:19:35.43:431,35,0	1/1:0,20:20:57.17:684,57,0	1/1:0,20:20:60.18:720,60,0	0/0:26,0:26:75.25:0,75,1049	0/0:24,0:24:69.21:0,69,933	0/0:7,0:7:21.07:0,21,294
chr10	14738784	.	G	GCCC	8442.40	PASS	AC=50;AF=0.926;AN=54;BaseQRankSum=-1.816;DP=620;FS=2.533;HRun=8;HaplotypeScore=106.0173;InbreedingCoeff=0.8769;MQ=92.20;MQ0=0;MQRankSum=-8.954;QD=14.89;ReadPosRankSum=2.645;VQSLOD=1.6337;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,1:28:26.90:207,27,0	1/1:3,5:10:12.62:192,13,0	0/0:26,0:27:57.03:0,57,716	0/0:24,0:25:31.59:0,32,426	1/1:5,0:23:20.89:73,21,0	1/1:4,0:16:14.95:32,15,0	1/1:10,0:44:38.62:84,39,0	1/1:13,1:16:16.27:207,16,0	1/1:11,9:23:11.55:182,12,0	1/1:9,9:19:21.04:353,21,0	1/1:8,0:8:9.03:146,9,0	1/1:5,1:31:51.29:427,51,0	1/1:3,0:22:34.14:279,34,0	1/1:5,0:21:32.67:234,33,0	1/1:9,19:32:36.97:655,37,0	1/1:5,21:27:39.13:746,39,0	1/1:3,31:37:78.20:1436,78,0	1/1:6,14:23:32.09:519,32,0	1/1:4,6:14:24.06:398,24,0	1/1:6,0:6:12.01:152,12,0	1/1:13,21:39:25.76:378,26,0	1/1:4,0:19:15.77:117,16,0	1/1:2,0:11:9.42:67,9,0	1/1:8,0:35:58.03:440,58,0	1/1:2,0:13:20.92:161,21,0	1/1:10,9:22:30.06:469,30,0	1/1:10,18:27:25.73:488,26,0	./.
chr10	14746651	.	C	CAGT	16935.22	PASS	AC=34;AF=0.630;AN=54;BaseQRankSum=7.109;DP=482;FS=2.534;HRun=0;HaplotypeScore=92.8238;InbreedingCoeff=0.9597;MQ=66.15;MQ0=1;MQRankSum=-4.633;QD=58.40;ReadPosRankSum=-1.125;VQSLOD=6.2016;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,108,1995	1/1:1,2:3:6.02:148,6,0	0/0:6,0:6:18.04:0,18,279	0/0:7,0:7:10.11:0,10,228	1/1:2,4:6:11.72:180,12,0	1/1:1,18:19:54.15:1276,54,0	1/1:2,22:29:63.22:1505,63,0	1/1:1,7:9:27.09:637,27,0	1/1:0,7:8:21.07:511,21,0	1/1:0,13:16:45.13:977,45,0	./.	0/0:37,0:37:99:0,111,2064	0/0:13,0:13:39.13:0,39,707	0/0:25,0:25:75.24:0,75,1367	1/1:2,7:9:27.05:606,27,0	1/1:1,9:11:30.10:733,30,0	1/1:1,34:38:99:2440,99,0	1/1:2,26:31:78.27:1922,78,0	1/1:1,7:10:30.10:685,30,0	1/1:0,4:4:12.04:295,12,0	1/1:9,40:53:98.79:2347,99,0	0/0:11,0:11:33.11:0,33,604	0/0:4,0:4:12.04:0,12,224	0/0:42,0:41:99:0,120,2205	0/0:10,0:10:27.09:0,27,501	1/1:1,15:18:48.15:1132,48,0	1/1:2,14:17:41.90:1028,42,0	1/1:2,6:9:21.07:514,21,0
chr10	14747864	.	TTC	T	156.49	PASS	AB=0.981;AC=20;AF=0.476;AN=42;BaseQRankSum=2.351;DP=638;FS=19.742;HRun=0;HaplotypeScore=83.5718;InbreedingCoeff=0.1910;MQ=60.69;MQ0=10;MQRankSum=2.843;QD=0.54;ReadPosRankSum=2.450;VQSLOD=0.1104;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,1:45:3:0,3,25	1/1:7,0:7:2.96:19,3,0	./.	./.	1/1:22,0:22:1.24:3,1,0	0/1:27,0:27:0:0,0,0	0/0:36,0:36:8.49:0,8,55	0/0:37,0:37:2.04:0,2,6	1/1:16,0:16:2.96:19,3,0	0/0:14,0:13:1.25:0,1,3	./.	0/1:25,1:25:19.90:20,0,60	0/0:26,0:27:10.54:0,11,125	0/0:24,0:24:8.63:0,9,91	0/1:25,0:25:1.24:13,0,1	1/1:30,0:30:8.93:63,9,0	0/0:21,0:21:1.76:0,2,8	1/1:19,0:19:8.02:46,8,0	0/1:22,0:21:3.97:4,0,22	1/1:18,0:18:0.47:1,0,0	0/1:32,0:30:18.93:21,0,19	./.	./.	0/1:23,2:24:46.41:46,0,80	./.	./.	1/1:23,0:23:2.96:20,3,0	0/0:13,0:11:0.47:0,0,1
chr10	14747915	.	TCA	T	6016.03	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=1.411;DP=602;FS=2.794;HRun=0;HaplotypeScore=88.5812;InbreedingCoeff=0.9448;MQ=70.38;MQ0=18;MQRankSum=-1.575;QD=16.99;ReadPosRankSum=-0.178;VQSLOD=4.8786;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:31:55.04:0,55,470	1/1:7,0:7:17.99:168,18,0	0/0:36,0:19:42.94:0,43,487	0/0:49,0:18:25.09:0,25,281	1/1:23,0:24:38.95:324,39,0	1/1:22,0:23:47.40:372,47,0	1/1:39,0:38:66.43:539,66,0	1/1:5,13:18:53.42:440,53,0	1/1:1,12:13:3.01:44,3,0	1/1:0,28:28:71.51:592,72,0	1/1:8,0:8:20.98:177,21,0	0/0:23,0:22:44.87:0,45,473	0/0:21,0:21:35.36:0,35,445	0/0:23,0:23:62.86:0,63,585	1/1:29,0:29:65:555,65,0	1/1:17,0:17:47.97:416,48,0	1/1:18,0:18:33.29:233,33,0	1/1:26,0:26:74.64:625,75,0	1/1:15,0:14:35.90:302,36,0	1/1:16,0:16:35.96:301,36,0	1/1:23,0:20:35.97:316,36,0	0/0:15,0:14:41.92:0,42,353	0/0:11,0:11:26.94:0,27,217	0/0:26,0:25:41.30:0,41,518	0/0:12,0:11:29.94:0,30,247	1/1:14,0:14:39.01:360,39,0	1/1:0,26:26:2.63:44,3,0	1/1:10,0:10:26.89:209,27,0
chr10	14748490	.	CA	C	13363.15	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=11.354;DP=726;FS=3.664;HRun=5;HaplotypeScore=70.4819;InbreedingCoeff=0.9912;MQ=85.12;MQ0=0;MQRankSum=-3.513;QD=30.79;ReadPosRankSum=3.001;VQSLOD=5.6844;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,153,2058	1/1:1,10:11:30.09:340,30,0	0/0:22,0:22:66.21:0,66,872	0/0:23,0:23:63.17:0,63,820	1/1:1,18:19:45.13:510,45,0	1/1:2,15:17:45.13:511,45,0	1/1:0,31:31:84.24:953,84,0	1/1:2,23:25:66.17:739,66,0	1/1:0,29:29:87.25:987,87,0	1/1:0,33:33:99:1123,99,0	1/1:0,20:20:54.15:612,54,0	0/0:41,0:41:99:0,120,1642	0/0:28,0:28:75.25:0,75,1026	0/0:37,0:37:99:0,108,1476	1/1:2,37:39:99:1225,108,0	1/1:1,32:33:96.27:1089,96,0	1/1:3,33:36:87.25:987,87,0	1/1:0,24:24:63.18:715,63,0	1/1:0,12:12:36.10:407,36,0	1/1:0,13:13:39.11:442,39,0	1/1:3,31:34:87.25:987,87,0	0/0:16,0:16:42.14:0,42,574	0/0:16,0:16:42.14:0,42,568	0/0:35,0:35:99:0,99,1354	0/0:20,0:20:57.19:0,57,780	1/1:2,15:17:45.13:510,45,0	1/1:2,34:36:99:1123,99,0	1/1:0,5:5:9.03:102,9,0
chr10	14753094	.	CCCCAG	C	711.34	PASS	AB=0.718;AC=4;AF=0.071;AN=56;BaseQRankSum=4.074;DP=420;FS=35.097;HRun=0;HaplotypeScore=84.0241;InbreedingCoeff=0.3727;MQ=80.66;MQ0=1;MQRankSum=-4.469;QD=18.72;ReadPosRankSum=3.098;VQSLOD=1.6330;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:38.54:0,39,461	0/0:8,0:8:24.07:0,24,514	0/0:34,0:25:43.15:0,43,1043	0/0:22,0:17:32.23:0,32,524	1/1:0,5:5:12:204,12,0	0/1:6,3:9:99:165,0,122	0/1:13,11:24:99:452,0,218	0/0:21,0:21:51.17:0,51,892	0/0:16,0:16:48.13:0,48,942	0/0:17,0:17:48.08:0,48,928	0/0:6,0:6:12.03:0,12,166	0/0:8,0:8:17.99:0,18,244	0/0:8,0:8:17.23:0,17,285	0/0:8,0:8:14.69:0,15,173	0/0:23,0:23:65.74:0,66,1276	0/0:12,0:12:36.12:0,36,721	0/0:24,0:24:66.23:0,66,1322	0/0:16,0:16:45.06:0,45,774	0/0:15,0:15:42.14:0,42,894	0/0:15,0:15:36.11:0,36,557	0/0:27,0:26:60.19:0,60,1006	0/0:9,0:9:20.61:0,21,379	0/0:3,0:3:9.03:0,9,190	0/0:27,0:27:30.01:0,30,498	0/0:3,0:3:2.80:0,3,13	0/0:16,0:16:48.08:0,48,770	0/0:19,0:19:54.15:0,54,932	0/0:10,0:10:27.06:0,27,436
chr10	14753516	.	CCCATG	C	1473.70	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=7.397;DP=631;FS=6.391;HRun=0;HaplotypeScore=117.2142;InbreedingCoeff=0.9603;MQ=85.51;MQ0=0;MQRankSum=-6.009;QD=27.29;ReadPosRankSum=1.014;VQSLOD=2.7029;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,105,3167	0/0:10,0:10:30.09:0,30,871	0/0:19,0:19:57.19:0,57,1664	0/0:22,0:22:63.18:0,63,1711	1/1:4,12:15:5.93:84,6,0	1/1:0,15:15:33.11:703,33,0	1/1:5,18:23:39.13:822,39,0	0/0:28,0:28:81.27:0,81,2396	0/0:28,0:28:75.26:0,75,2295	0/0:27,0:27:75.25:0,75,2213	0/0:12,0:12:33.11:0,33,1023	0/0:33,0:33:96.33:0,96,2904	0/0:21,0:21:63.22:0,63,1973	0/0:39,0:39:99:0,117,3592	0/0:22,0:22:66.20:0,66,1829	0/0:22,0:22:63.22:0,63,1967	0/0:15,0:15:45.15:0,45,1362	0/0:20,0:20:54.17:0,54,1524	0/0:19,0:19:54.16:0,54,1389	0/0:22,0:22:66.20:0,66,1846	0/0:40,0:40:99:0,114,3343	0/0:26,0:26:78.25:0,78,2339	0/0:11,0:11:33.11:0,33,1022	0/0:26,0:26:78.27:0,78,2404	0/0:14,0:14:42.12:0,42,1133	0/0:28,0:28:84.29:0,84,2471	0/0:22,0:22:66.23:0,66,2036	0/0:13,0:13:38.80:0,39,1138
chr10	14754204	.	CT	C	14373.62	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=14.287;DP=625;FS=0.625;HRun=1;HaplotypeScore=78.7124;InbreedingCoeff=0.9987;MQ=75.49;MQ0=0;MQRankSum=-2.227;QD=36.95;ReadPosRankSum=1.339;VQSLOD=5.2865;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:87.26:0,87,1257	1/1:0,8:8:21.05:293,21,0	0/0:11,0:11:30:0,30,373	0/0:19,0:19:44.13:0,44,553	1/1:0,20:20:54.11:721,54,0	1/1:1,18:19:39.16:594,39,0	1/1:0,17:17:51.17:711,51,0	1/1:0,32:32:96.23:1263,96,0	1/1:0,16:16:33.06:460,33,0	1/1:1,23:24:72.18:931,72,0	1/1:0,22:22:48.16:661,48,0	0/0:36,0:36:99:0,108,1497	0/0:35,0:35:99:0,105,1464	0/0:22,0:22:66.17:0,66,909	1/1:0,27:27:72.24:1004,72,0	1/1:0,26:26:75.25:1046,75,0	1/1:0,18:18:51.17:711,51,0	1/1:0,21:21:51.17:711,51,0	1/1:0,24:24:72.22:973,72,0	1/1:0,16:16:47.67:482,48,0	1/1:0,30:30:78.26:1085,78,0	0/0:17,0:17:51.14:0,51,704	0/0:21,0:21:63.20:0,63,921	0/0:28,0:28:84.14:0,84,1159	0/0:18,0:18:54.04:0,54,735	1/1:0,38:38:99:1433,109,0	1/1:0,24:24:72.24:1002,72,0	1/1:0,7:7:21.07:292,21,0
chr10	14754345	.	G	GAC	15017.38	PASS	AB=0.590;AC=33;AF=0.589;AN=56;BaseQRankSum=-11.926;DP=775;FS=7.230;HRun=0;HaplotypeScore=97.4152;InbreedingCoeff=0.7677;MQ=63.05;MQ0=16;MQRankSum=0.982;QD=32.58;ReadPosRankSum=1.331;VQSLOD=6.9004;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:44:98.58:0,99,1223	0/1:2,7:9:22.45:183,0,22	0/0:48,0:22:17.15:0,17,289	0/0:47,0:27:43.92:0,44,464	1/1:14,17:31:20.08:1137,20,0	1/1:8,13:21:39.13:644,39,0	1/1:4,21:25:17.55:807,18,0	1/1:7,37:44:73.88:1684,74,0	1/1:1,20:21:39.13:644,39,0	1/1:4,24:27:69.22:1113,69,0	0/1:6,19:25:20.42:736,0,20	0/0:28,0:28:78.24:0,78,962	0/0:20,0:20:51.15:0,51,619	0/0:21,0:21:57.17:0,57,699	1/1:3,14:17:42.14:691,42,0	1/1:3,23:25:60.21:986,60,0	1/1:4,19:23:13.65:748,14,0	1/1:14,13:27:32.42:1000,32,0	1/1:9,13:20:41.99:639,42,0	1/1:3,19:22:10.64:703,11,0	1/1:8,22:30:39.13:643,39,0	0/0:22,0:22:54.17:0,54,674	0/0:26,0:26:69.19:0,69,837	0/0:29,0:29:75.02:0,75,918	0/0:27,0:27:69.17:0,69,821	1/1:7,37:44:70.84:1694,71,0	1/1:3,24:28:42.09:693,42,0	0/1:7,9:16:50.95:273,0,51
chr10	14759957	.	CCT	C	397.24	PASS	AB=0.657;AC=1;AF=0.018;AN=56;BaseQRankSum=3.702;DP=723;FS=2.504;HRun=0;HaplotypeScore=114.8635;InbreedingCoeff=-0.0182;MQ=79.36;MQ0=0;MQRankSum=-2.092;QD=17.27;ReadPosRankSum=1.144;VQSLOD=3.8961;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,108,2081	0/0:10,0:10:30.10:0,30,606	0/0:15,0:15:45.12:0,45,803	0/0:17,0:18:39.53:0,40,837	0/0:19,0:19:57.20:0,57,1158	0/0:28,0:28:84.29:0,84,1689	0/0:33,0:33:96.31:0,96,1840	0/0:32,0:32:96.33:0,96,1902	0/0:24,0:24:72.25:0,72,1432	0/0:29,0:29:87.30:0,87,1735	0/0:18,0:18:54.16:0,54,1025	0/0:38,0:38:99:0,114,2210	0/0:25,0:25:75.24:0,75,1470	0/0:35,0:35:99:0,105,2082	0/0:29,0:29:87.30:0,87,1747	0/0:26,0:26:78.27:0,78,1584	0/1:11,12:23:99:472,0,593	0/0:24,0:24:66.23:0,66,1318	0/0:29,0:29:87.26:0,87,1711	0/0:18,0:18:54.17:0,54,1062	0/0:54,0:54:99:0,157,3168	0/0:23,0:23:69.17:0,69,1280	0/0:14,0:14:42.13:0,42,817	0/0:36,0:36:99:0,108,2159	0/0:20,0:20:60.21:0,60,1208	0/0:25,0:25:75.26:0,75,1501	0/0:30,0:29:90.31:0,90,1823	0/0:12,0:12:36.12:0,36,704
chr10	14767085	.	TC	T	13100.06	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=12.089;DP=687;FS=2.342;HRun=2;HaplotypeScore=70.2911;InbreedingCoeff=0.9998;MQ=83.54;MQ0=0;MQRankSum=-1.899;QD=36.29;ReadPosRankSum=0.663;VQSLOD=5.3991;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:90.30:0,90,1346	1/1:0,10:10:27.09:350,27,0	0/0:18,0:18:48.15:0,48,678	0/0:27,0:27:64.99:0,65,861	0/0:16,0:16:48.16:0,48,719	0/0:32,0:32:93.30:0,93,1374	0/0:30,0:30:90.30:0,90,1345	1/1:1,29:30:84.24:1049,84,0	1/1:1,24:25:69.22:896,69,0	1/1:1,24:25:75.22:940,75,0	1/1:0,18:18:54.13:679,54,0	0/0:30,0:30:90.28:0,90,1308	0/0:31,0:31:93.30:0,93,1370	0/0:28,0:28:84.23:0,84,1210	1/1:0,12:12:33.11:429,33,0	1/1:0,32:32:87.28:1130,87,0	1/1:0,34:34:96.31:1246,96,0	1/1:1,22:23:66.21:857,66,0	1/1:0,13:13:39.13:504,39,0	1/1:0,14:14:42.14:542,42,0	1/1:2,65:67:99:2337,181,0	0/0:16,0:16:45.15:0,45,668	0/0:17,0:17:48.08:0,48,691	0/0:33,0:33:90.26:0,90,1324	0/0:18,0:18:54.17:0,54,781	1/1:0,23:23:66.21:857,66,0	1/1:0,23:23:66.21:857,66,0	1/1:0,12:12:33.11:428,33,0
chr10	14767542	.	AC	A	11261.29	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=8.508;DP=625;FS=2.517;HRun=1;HaplotypeScore=65.8656;InbreedingCoeff=0.9990;MQ=78.83;MQ0=0;MQRankSum=-2.726;QD=37.66;ReadPosRankSum=2.824;VQSLOD=5.5746;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:81.28:0,81,1292	1/1:0,9:9:27.09:378,27,0	0/0:20,0:19:43.05:0,43,747	0/0:29,0:29:87.26:0,87,1323	0/0:15,0:15:45.15:0,45,719	0/0:24,0:24:69.22:0,69,1068	0/0:34,0:34:99:0,102,1610	1/1:0,20:20:60.17:804,60,0	1/1:0,17:17:45.15:626,45,0	1/1:0,18:18:54.18:752,54,0	1/1:0,12:12:27.05:356,27,0	0/0:36,0:36:99:0,108,1623	0/0:30,0:30:90.31:0,90,1415	0/0:22,0:22:63.21:0,63,1006	1/1:0,22:22:63.21:881,63,0	1/1:0,21:21:60.20:837,60,0	1/1:0,23:23:66.22:920,66,0	1/1:0,30:30:75.25:1043,75,0	1/1:0,21:20:57.19:792,57,0	1/1:0,11:11:27.09:377,27,0	1/1:0,44:44:99:1678,120,0	0/0:17,0:17:48.16:0,48,762	0/0:17,0:17:51.16:0,51,787	0/0:32,0:31:96.33:0,96,1515	0/0:17,0:17:48.15:0,48,741	1/1:0,25:24:69.21:937,69,0	1/1:0,16:16:42.14:588,42,0	1/1:0,10:10:21.07:294,21,0
chr10	14768177	.	CT	C	11915.11	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=11.130;DP=662;FS=4.690;HRun=2;HaplotypeScore=69.4691;InbreedingCoeff=0.9954;MQ=85.02;MQ0=0;MQRankSum=-3.391;QD=35.57;ReadPosRankSum=1.167;VQSLOD=5.4376;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,114,1703	1/1:0,4:4:12.04:156,12,0	0/0:24,0:24:69.22:0,69,947	0/0:19,0:19:57.07:0,57,716	0/0:24,0:24:72.21:0,72,1035	0/0:27,0:27:81.26:0,81,1194	0/0:31,0:31:86.40:0,86,1299	1/1:1,28:29:84.21:1032,84,0	1/1:0,22:22:66.21:849,66,0	1/1:1,21:22:63.19:804,63,0	1/1:0,12:12:33.11:428,33,0	0/0:28,0:28:81.26:0,81,1176	0/0:29,0:29:87.26:0,87,1244	0/0:26,0:26:78.26:0,78,1168	1/1:1,39:40:99:1324,102,0	1/1:0,24:24:72.23:934,72,0	1/1:0,27:27:72.23:934,72,0	1/1:0,20:20:60.20:779,60,0	1/1:0,25:25:75.16:902,75,0	1/1:0,16:16:39.13:505,39,0	1/1:3,35:38:99:1324,102,0	0/0:14,0:14:42.12:0,42,591	0/0:14,0:14:42.11:0,42,571	0/0:30,0:29:90.30:0,90,1348	0/0:22,0:22:60.15:0,60,836	1/1:0,26:26:75.24:972,75,0	1/1:0,21:21:51.02:661,51,0	1/1:0,9:9:24.08:311,24,0
chr10	14769314	.	AC	A	12163.44	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=17.875;DP=687;FS=1.234;HRun=2;HaplotypeScore=150.3614;InbreedingCoeff=0.9976;MQ=74.17;MQ0=0;MQRankSum=-13.328;QD=35.05;ReadPosRankSum=1.521;VQSLOD=4.4333;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,123,1817	1/1:0,10:10:30.10:389,30,0	0/0:20,0:20:48.21:0,48,799	0/0:20,0:20:45.18:0,45,712	0/0:24,0:24:60.16:0,60,842	0/0:27,0:27:78.24:0,78,1112	0/0:27,0:27:81.26:0,81,1190	1/1:1,34:35:99:1311,102,0	1/1:0,31:31:93.30:1206,93,0	1/1:3,28:31:81.26:1051,81,0	1/1:3,10:13:27.09:349,27,0	0/0:32,0:32:96.33:0,96,1438	0/0:23,0:23:66.22:0,66,981	0/0:31,0:31:93.32:0,93,1394	1/1:2,28:30:81.25:1036,81,0	1/1:1,37:38:99:1342,105,0	1/1:4,20:24:57.18:732,57,0	1/1:2,24:26:78.25:1006,78,0	1/1:0,15:15:45.14:571,45,0	1/1:0,22:22:57.18:730,57,0	1/1:0,18:18:33.11:428,33,0	0/0:25,0:25:72.24:0,72,1063	0/0:14,0:14:42.14:0,42,628	0/0:32,0:32:93.30:0,93,1369	0/0:23,0:23:69.21:0,69,993	1/1:3,20:23:66.21:844,66,0	1/1:2,24:26:75.24:973,75,0	1/1:0,5:5:15.05:195,15,0
chr10	14769341	.	GCCAGCTCTC	G	24058.66	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=20.613;DP=699;FS=8.044;HRun=0;HaplotypeScore=238.6787;InbreedingCoeff=0.9973;MQ=72.66;MQ0=0;MQRankSum=-19.505;QD=67.39;ReadPosRankSum=1.138;VQSLOD=3.6741;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,120,5591	1/1:0,14:14:36.12:1100,36,0	0/0:24,0:25:66.22:0,66,2622	0/0:15,0:15:42.14:0,42,1809	0/0:24,0:24:69.20:0,69,2968	0/0:27,0:27:78.27:0,78,3465	0/0:30,0:30:87.30:0,87,4116	1/1:10,16:26:54.19:1570,54,0	1/1:3,30:33:84.29:2520,84,0	1/1:5,31:36:90.31:2583,90,0	1/1:3,14:17:36.12:1058,36,0	0/0:37,0:37:99:0,105,4927	0/0:24,0:24:69.22:0,69,3145	0/0:31,0:31:90.31:0,90,4138	1/1:5,31:36:75.26:2291,75,0	1/1:5,31:36:90.30:2683,90,0	1/1:1,30:31:66.16:2012,66,0	1/1:3,20:23:57.19:1602,57,0	1/1:4,7:11:24.08:711,24,0	1/1:4,11:15:33.10:922,33,0	1/1:8,12:20:28.04:827,28,0	0/0:23,0:23:69.24:0,69,3316	0/0:11,0:11:33.09:0,33,1468	0/0:33,0:33:99:0,99,4742	0/0:22,0:22:66.23:0,66,3111	1/1:5,22:27:72.23:2046,72,0	1/1:1,21:22:57.18:1675,57,0	1/1:0,10:10:15.05:459,15,0
chr10	14772594	.	GTTT	G	7364.48	PASS	AB=0.519;AC=29;AF=0.518;AN=56;BaseQRankSum=10.210;DP=562;FS=2.022;HRun=13;HaplotypeScore=94.2189;InbreedingCoeff=0.9087;MQ=65.81;MQ0=0;MQRankSum=-0.627;QD=24.96;ReadPosRankSum=3.186;VQSLOD=4.3210;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:44:99:0,117,1994	1/1:3,8:11:0.44:177,0,0	0/0:17,0:11:20.98:0,21,286	0/0:14,0:10:11.90:0,12,169	0/0:19,0:21:60.17:0,60,998	0/0:18,0:19:48.12:0,48,805	0/0:21,0:26:75.19:0,75,1232	1/1:9,11:22:21.95:296,22,0	1/1:6,12:18:36.05:438,36,0	1/1:3,19:22:57.12:667,57,0	1/1:2,12:14:32.99:382,33,0	0/0:12,0:12:30.07:0,30,540	0/0:18,0:21:48.56:0,49,791	0/0:10,0:11:27.03:0,27,421	0/1:0,13:14:3.81:399,0,4	1/1:0,14:15:36.04:419,36,0	1/1:4,28:32:63.12:766,63,0	1/1:5,25:31:44.80:744,45,0	1/1:3,17:20:51.11:586,51,0	1/1:3,9:12:17.99:219,18,0	1/1:5,24:30:55.37:672,55,0	0/0:13,0:13:33.11:0,33,631	0/0:18,0:18:50.37:0,50,884	0/0:23,0:24:66.11:0,66,1126	0/0:21,0:26:66.11:0,66,1110	1/1:4,18:22:57.13:689,57,0	1/1:2,17:19:39.09:474,39,0	1/1:0,13:13:36.11:438,36,0
chr10	14773494	.	G	GCAT	20798.90	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-8.898;DP=746;FS=7.551;HRun=0;HaplotypeScore=119.0219;InbreedingCoeff=0.9950;MQ=88.18;MQ0=1;MQRankSum=-5.247;QD=56.37;ReadPosRankSum=1.588;VQSLOD=6.3066;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,147,2339	1/1:0,11:11:26.95:611,27,0	0/0:34,0:34:71.15:0,71,993	0/0:26,0:26:45.77:0,46,672	0/0:21,0:21:54.14:0,54,884	0/0:21,0:21:60.17:0,60,948	0/0:31,0:31:78.24:0,78,1249	1/1:7,22:28:78.27:1753,78,0	1/1:3,31:34:96.33:2143,96,0	1/1:2,28:30:84.29:1900,84,0	1/1:1,12:13:20.76:475,21,0	0/0:31,0:31:93.32:0,93,1549	0/0:21,0:20:57.18:0,57,924	0/0:16,0:16:48.16:0,48,800	1/1:4,27:31:78.27:1767,78,0	1/1:4,27:31:81.28:1835,81,0	1/1:1,39:41:99:2446,108,0	1/1:2,20:22:60.16:1289,60,0	1/1:7,15:21:57.17:1213,57,0	1/1:3,12:15:30.10:680,30,0	1/1:4,32:37:69.71:1563,70,0	0/0:24,0:24:66.21:0,66,1069	0/0:19,0:19:48.12:0,48,799	0/0:59,0:59:99:0,166,2696	0/0:19,0:19:52.05:0,52,827	1/1:2,19:21:63.22:1427,63,0	1/1:0,22:24:63.22:1427,63,0	1/1:0,5:5:12.04:272,12,0
chr10	14773574	.	CGACACA	C	3080.95	PASS	AB=0.888;AC=20;AF=0.357;AN=56;BaseQRankSum=1.566;DP=508;FS=0.370;HRun=0;HaplotypeScore=127.0468;InbreedingCoeff=-0.0872;MQ=69.60;MQ0=10;MQRankSum=-2.258;QD=10.07;ReadPosRankSum=0.816;VQSLOD=2.0107;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:31:67.62:0,68,1028	0/1:3,2:5:22.50:70,0,22	0/0:31,0:19:43.08:0,43,401	0/0:35,0:25:45.40:0,45,425	0/0:12,0:12:9.15:0,9,94	0/1:20,0:17:5.65:6,0,193	0/1:25,0:25:14.05:14,0,362	1/1:20,0:20:59.98:535,60,0	1/1:18,7:26:13.05:463,13,0	0/1:9,2:11:82.93:202,0,83	0/1:6,0:7:62.88:63,0,65	0/0:18,0:18:41.51:0,42,584	0/0:10,0:10:28.22:0,28,354	0/0:6,0:5:14.94:0,15,252	1/1:15,5:19:8.26:311,8,0	0/1:11,3:17:99:125,0,102	0/1:29,1:32:99:152,0,718	0/1:22,1:26:99:372,0,106	0/1:11,1:12:9.57:188,0,10	0/1:6,1:10:46.04:98,0,46	0/1:28,0:28:85.62:342,0,86	0/0:14,0:14:26.13:0,26,404	0/0:12,0:12:27.72:0,28,391	0/0:26,0:25:67.31:0,67,695	0/0:6,0:6:11.88:0,12,172	0/1:13,1:13:99:194,0,130	0/1:19,3:23:99:112,0,671	0/1:7,0:6:8.46:8,0,226
chr10	14773575	.	GACACAC	G	92.11	PASS	AB=1.000;AC=7;AF=0.135;AN=52;BaseQRankSum=1.813;DP=529;FS=1.737;HRun=0;HaplotypeScore=143.1511;InbreedingCoeff=0.3952;MQ=67.77;MQ0=12;MQRankSum=-1.939;QD=1.08;ReadPosRankSum=-0.796;VQSLOD=2.8073;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:33:23.70:0,24,627	0/0:5,0:5:5.93:0,6,80	./.	./.	1/1:9,3:12:2.64:20,3,0	1/1:18,2:17:3.01:60,3,0	1/1:22,3:26:6.02:102,6,0	0/0:20,0:20:3.01:0,3,54	0/0:28,0:26:7.27:0,7,109	0/0:11,0:11:6.02:0,6,161	0/0:9,0:9:9.03:0,9,187	0/0:18,0:19:15.05:0,15,386	0/0:8,0:10:10.59:0,11,215	0/0:6,0:5:6.02:0,6,161	0/0:20,0:19:3.01:0,3,55	0/0:17,0:17:18.04:0,18,229	0/0:34,0:33:57.17:0,57,1269	0/1:27,0:27:25.28:25,0,289	0/0:12,0:12:9:0,9,115	0/0:11,0:11:11.05:0,11,142	0/0:33,0:32:29.26:0,29,461	0/0:14,0:17:13.79:0,14,343	0/0:10,0:11:11.14:0,11,295	0/0:30,0:28:18.06:0,18,372	0/0:5,0:5:3.01:0,3,97	0/0:14,0:13:9.03:0,9,224	0/0:24,0:24:41.72:0,42,1049	0/0:9,0:8:21.04:0,21,473
chr10	14774113	.	TAA	T	3811.97	PASS	AB=0.625;AC=29;AF=0.518;AN=56;BaseQRankSum=-4.982;DP=575;FS=4.706;HRun=16;HaplotypeScore=85.8209;InbreedingCoeff=0.8635;MQ=75.95;MQ0=3;MQRankSum=-1.629;QD=13.52;ReadPosRankSum=2.997;VQSLOD=3.0795;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:44:86.53:0,87,831	1/1:2,1:3:2.92:25,3,0	0/0:34,1:18:30.62:0,31,237	0/0:26,0:18:19.25:0,19,237	0/0:25,0:31:64.89:0,65,702	0/0:15,0:17:29.19:0,29,269	0/0:15,0:19:43.84:0,44,499	1/1:15,11:27:37.47:292,37,0	1/1:5,22:27:52.78:532,53,0	1/1:6,12:20:20.81:252,21,0	1/1:5,7:13:14.82:167,15,0	0/0:17,0:23:45.73:0,46,423	0/0:4,0:9:8.96:0,9,76	0/0:3,0:16:41.55:0,42,400	1/1:3,17:22:41.58:379,42,0	1/1:8,20:28:41.66:340,42,0	1/1:5,15:22:16.63:283,17,0	1/1:8,11:18:20.78:175,21,0	1/1:9,17:28:53.04:455,53,0	1/1:9,10:20:35.21:275,35,0	0/1:2,2:5:9.16:17,0,9	0/0:7,0:17:36.03:0,36,373	0/0:10,0:20:33.25:0,33,318	0/0:5,0:14:5.64:0,6,248	0/0:6,0:19:33.06:0,33,355	1/1:8,12:22:7.07:286,7,0	1/1:7,10:18:22.44:259,22,0	1/1:5,3:7:8.96:75,9,0
chr10	14776656	.	G	GGA	1551.99	PASS	AB=0.988;AC=34;AF=0.630;AN=54;BaseQRankSum=0.130;DP=580;FS=7.184;HRun=0;HaplotypeScore=140.6129;InbreedingCoeff=0.0724;MQ=56.07;MQ0=9;MQRankSum=-0.596;QD=3.26;ReadPosRankSum=-1.070;VQSLOD=1.9447;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:28:17.67:42,0,18	1/1:9,0:8:1.02:25,1,0	1/1:22,0:9:0.47:1,0,0	0/1:30,0:17:0:0,0,0	./.	1/1:23,0:22:23.24:223,23,0	0/1:13,0:13:23.62:42,0,24	1/1:27,0:26:2.84:16,3,0	0/1:18,0:18:13.23:28,0,13	1/1:28,0:26:8.34:137,8,0	1/1:12,0:11:2.97:20,3,0	0/0:25,0:25:20.53:0,21,140	0/1:23,0:23:5.14:5,0,121	0/0:22,0:22:20.43:0,20,143	1/1:20,3:21:16.83:171,17,0	1/1:27,1:27:9.53:185,10,0	0/1:18,0:18:0.24:24,0,0	0/1:13,2:15:18.33:117,0,18	0/1:14,0:13:0.05:47,0,0	0/1:23,0:22:8.99:112,0,9	0/0:14,0:14:0.47:0,0,1	0/0:19,0:19:10.90:0,11,65	0/1:19,0:19:14.70:15,0,25	0/1:18,0:18:19.75:20,0,71	0/1:20,0:20:5.46:5,0,51	1/1:29,0:29:29.09:205,29,0	1/1:19,0:19:12.90:179,13,0	1/1:15,0:14:13.69:84,14,0
chr10	14776673	.	GAGAGAGAGAGAGAGACAGAGAGAGAC	G	933.64	PASS	AB=1.000;AC=3;AF=0.056;AN=54;BaseQRankSum=-5.679;DP=634;FS=3.352;HRun=0;HaplotypeScore=359.3237;InbreedingCoeff=0.5097;MQ=45.56;MQ0=18;MQRankSum=1.270;QD=30.12;ReadPosRankSum=0.413;VQSLOD=1.1902;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:31:40.94:0,41,878	0/0:9,0:8:18.03:0,18,405	0/0:15,0:3:4.82:0,5,31	0/0:22,0:9:11.67:0,12,94	./.	1/1:19,0:18:25.42:809,25,0	0/1:12,0:11:62.39:230,0,62	0/0:36,0:31:51.30:0,51,851	0/0:19,0:19:21.24:0,21,703	0/0:33,0:31:87.17:0,87,1992	0/0:15,0:14:9.02:0,9,300	0/0:24,0:24:27.06:0,27,779	0/0:27,0:27:67.40:0,67,2287	0/0:23,0:23:42.44:0,42,1446	0/0:26,0:24:23.99:0,24,561	0/0:35,0:33:60.18:0,60,1732	0/0:19,0:18:36.59:0,37,1116	0/0:13,0:13:39.13:0,39,1302	0/0:21,0:18:50.98:0,51,1399	0/0:36,0:33:55.38:0,55,1457	0/0:14,0:14:6.02:0,6,298	0/0:18,0:18:27.55:0,28,872	0/0:22,0:22:33.10:0,33,881	0/0:19,0:19:16.67:0,17,894	0/0:26,0:25:36.10:0,36,1151	0/0:35,0:32:87.27:0,87,2588	0/0:23,0:23:56.40:0,56,1592	0/0:18,0:16:36.08:0,36,814
chr10	14776677	.	G	GAC	445.91	PASS	AB=0.986;AC=7;AF=0.130;AN=54;BaseQRankSum=1.377;DP=626;FS=10.156;HRun=0;HaplotypeScore=169.3551;InbreedingCoeff=0.1485;MQ=44.80;MQ0=18;MQRankSum=0.333;QD=3.48;ReadPosRankSum=3.730;VQSLOD=1.5572;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:31:36.58:0,37,303	0/0:8,0:7:16.91:0,17,117	0/0:12,0:2:4.82:0,5,31	0/0:17,0:5:11.50:0,11,75	./.	1/1:15,3:17:25.83:370,26,0	0/1:12,1:12:17.95:130,0,18	0/0:38,0:32:49.01:0,49,368	0/0:19,0:19:12.03:0,12,122	0/0:36,0:33:75.14:0,75,503	0/0:15,0:14:7.81:0,8,55	0/0:25,0:25:27:0,27,335	0/0:28,0:28:58.72:0,59,569	0/0:22,0:22:41.78:0,42,444	0/1:28,0:26:26.63:27,0,78	0/1:34,0:32:29.13:29,0,311	0/0:19,0:18:29.29:0,29,241	0/1:13,0:13:14.41:14,0,169	0/0:20,0:17:41.36:0,41,298	0/0:36,0:33:34.36:0,34,354	0/0:13,0:13:6:0,6,52	0/0:19,0:19:27.02:0,27,282	0/0:20,0:20:30.45:0,30,278	0/0:19,0:19:18.72:0,19,273	0/0:27,0:26:37.83:0,38,361	0/0:33,0:30:56.56:0,57,410	0/1:22,0:22:7.09:7,0,260	0/0:18,0:16:29.70:0,30,220
chr10	14776687	.	GAC	G	3096.34	PASS	AB=0.911;AC=31;AF=0.574;AN=54;BaseQRankSum=-8.257;DP=638;FS=15.434;HRun=0;HaplotypeScore=163.5252;InbreedingCoeff=-0.5566;MQ=43.10;MQ0=18;MQRankSum=0.171;QD=5.19;ReadPosRankSum=-1.276;VQSLOD=1.8846;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:33,1:33:12.88:236,13,0	0/1:6,1:7:4.49:106,0,4	1/1:7,0:1:0.89:2,1,0	0/1:9,0:1:0:0,0,0	./.	1/1:5,16:20:20.93:193,21,0	0/1:6,11:15:26:37,0,26	0/1:40,0:32:38.46:38,0,236	0/1:16,3:19:22.34:22,0,54	0/1:34,5:36:96.46:340,0,96	0/1:16,0:15:14.99:15,0,16	0/1:9,16:25:25.24:25,0,84	0/1:24,3:27:33.74:390,0,34	0/1:19,0:19:62.80:88,0,63	0/1:26,4:28:31.84:92,0,32	0/1:28,5:31:63.96:103,0,64	0/1:20,1:20:54.59:124,0,55	0/1:14,0:14:34.90:121,0,35	0/1:22,0:19:64.81:120,0,65	0/1:35,0:32:60.85:133,0,61	0/0:19,0:19:8.04:0,8,54	0/1:21,1:22:35.66:71,0,36	1/1:19,0:19:7.33:172,7,0	0/1:18,1:19:46.01:100,0,46	1/1:26,1:26:19.78:272,20,0	0/1:34,1:31:91.90:212,0,92	0/1:16,5:21:75.09:152,0,75	0/1:19,0:17:58.05:81,0,58
chr10	14776689	.	CAG	C	725.40	PASS	AB=0.984;AC=21;AF=0.420;AN=50;BaseQRankSum=2.439;DP=627;FS=18.829;HRun=0;HaplotypeScore=172.7843;InbreedingCoeff=-0.4091;MQ=43.14;MQ0=19;MQRankSum=-0.468;QD=1.53;ReadPosRankSum=-1.829;VQSLOD=1.4529;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:34,0:33:4.76:5,0,124	0/1:7,0:7:7.63:8,0,21	./.	./.	./.	1/1:21,0:20:10.46:72,10,0	0/0:17,0:15:0.96:0,1,35	0/1:38,1:31:25.43:66,0,25	0/1:19,0:19:35.92:36,0,46	0/1:36,3:35:99:170,0,133	0/0:15,1:15:2.80:0,3,7	0/0:25,0:25:0.42:0,0,224	0/1:27,0:27:47.46:47,0,179	0/0:19,0:19:19.64:0,20,254	1/1:29,0:27:7.96:37,8,0	0/1:33,0:31:39.86:75,0,40	0/1:19,1:19:27.70:57,0,28	0/1:14,0:14:22.26:22,0,77	0/1:18,3:18:53.85:54,0,73	0/1:35,0:32:35.66:36,0,73	0/1:19,0:19:4.47:4,0,51	0/0:21,0:21:14.32:0,14,162	0/0:19,0:19:4.18:0,4,48	0/1:20,0:20:1.52:2,0,194	0/1:26,0:25:8.21:8,0,59	0/1:35,0:31:57.85:58,0,114	0/1:21,0:21:29.94:70,0,30	0/1:15,0:14:4.73:39,0,5
chr10	14776693	.	G	GAC	364.83	PASS	AB=0.972;AC=14;AF=0.280;AN=50;BaseQRankSum=7.163;DP=630;FS=14.522;HRun=0;HaplotypeScore=198.1699;InbreedingCoeff=0.0294;MQ=43.42;MQ0=16;MQRankSum=4.853;QD=1.42;ReadPosRankSum=1.629;VQSLOD=1.8926;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:19.42:0,19,304	0/0:7,0:7:15.43:0,15,124	./.	./.	./.	1/1:20,0:19:19.14:131,19,0	0/1:14,2:14:16.86:17,0,39	0/0:35,0:28:44.14:0,44,609	0/1:21,0:21:13.32:13,0,35	0/0:40,0:36:10.98:0,11,331	0/1:19,0:18:2.19:2,0,8	0/0:28,0:28:23.98:0,24,302	0/0:28,1:29:25.10:0,25,552	0/0:18,0:18:35.90:0,36,405	1/1:27,0:25:16.62:72,17,0	0/1:31,0:29:38.97:99,0,39	0/0:23,0:22:2.69:0,3,109	0/1:13,1:14:77.63:78,0,98	0/0:19,0:17:7.01:0,7,105	0/1:34,0:31:18.26:18,0,101	0/1:18,1:19:4.86:5,0,33	0/0:21,0:21:24.02:0,24,257	0/0:23,0:23:23.99:0,24,221	0/1:19,1:20:17.76:18,0,259	0/0:28,0:28:35.03:0,35,327	0/0:36,0:32:22.85:0,23,403	0/1:22,0:22:56.93:57,0,58	0/1:14,0:13:5.58:6,0,79
chr10	14776697	.	GAC	G	4158.38	PASS	AB=0.993;AC=38;AF=0.760;AN=50;BaseQRankSum=-1.608;DP=620;FS=7.401;HRun=0;HaplotypeScore=178.1078;InbreedingCoeff=-0.3538;MQ=43.45;MQ0=21;MQRankSum=4.161;QD=7.07;ReadPosRankSum=-2.295;VQSLOD=2.3114;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:36,0:36:6.06:243,6,0	0/1:6,0:6:17.80:70,0,18	./.	./.	./.	1/1:17,0:16:10.98:67,11,0	0/1:15,0:13:40.93:41,0,45	0/1:32,1:27:89.44:89,0,96	1/1:20,1:21:0.94:106,1,0	0/1:38,1:35:10.95:462,0,11	1/1:18,1:18:11.22:66,11,0	0/1:28,0:28:99:106,0,136	0/1:30,0:30:69.40:304,0,69	0/1:18,0:18:99:105,0,105	1/1:24,3:25:20.92:159,21,0	1/1:28,4:30:29.99:259,30,0	1/1:24,0:23:35.16:285,35,0	0/1:13,0:13:3.08:125,0,3	1/1:17,0:15:18.09:128,18,0	1/1:33,0:30:17.35:230,17,0	0/1:19,0:18:36.50:37,0,45	0/1:22,0:21:63.07:73,0,63	1/1:20,0:20:0.24:175,0,0	0/1:21,0:21:84.79:86,0,85	1/1:26,0:26:7.87:259,8,0	0/1:35,1:32:57.63:225,0,58	1/1:21,1:22:34.71:317,35,0	1/1:14,0:13:14.90:142,15,0
chr10	14776701	.	GAGAC	G	3037.99	PASS	AB=0.954;AC=22;AF=0.423;AN=52;BaseQRankSum=3.480;DP=601;FS=4.149;HRun=0;HaplotypeScore=185.5661;InbreedingCoeff=0.4408;MQ=43.19;MQ0=21;MQRankSum=-0.849;QD=8.94;ReadPosRankSum=1.440;VQSLOD=2.7037;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:18.51:0,19,219	0/0:6,0:6:3.87:0,4,14	./.	0/0:7,0:1:3.01:0,3,39	./.	0/0:15,0:14:11.68:0,12,82	0/0:15,0:13:8.87:0,9,113	1/1:30,1:25:28.97:202,29,0	1/1:19,2:21:16.41:192,16,0	0/1:37,2:35:31.27:442,0,31	1/1:17,1:17:8.98:129,9,0	0/0:27,0:27:35.41:0,35,341	0/0:31,0:31:40.66:0,41,543	0/0:17,0:17:13.60:0,14,226	1/1:28,1:27:18.94:202,19,0	1/1:31,0:29:35.95:401,36,0	1/1:20,4:23:13.60:385,14,0	0/1:13,0:13:38.90:111,0,39	0/1:17,1:15:19.64:134,0,20	0/1:28,2:27:3.78:192,0,4	0/1:15,1:15:48.68:49,0,58	0/0:21,0:20:14.46:0,14,111	0/0:18,0:18:15.13:0,15,184	0/0:19,0:19:25.28:0,25,264	0/0:26,0:26:14.99:0,15,240	0/1:33,2:31:33.08:255,0,33	1/1:22,0:22:3.58:338,4,0	1/1:13,0:13:16.63:193,17,0
chr10	14776705	.	C	CAG	3156.32	PASS	AB=0.966;AC=22;AF=0.423;AN=52;BaseQRankSum=6.515;DP=609;FS=4.873;HRun=0;HaplotypeScore=171.2637;InbreedingCoeff=0.4163;MQ=43.28;MQ0=21;MQRankSum=-0.778;QD=8.87;ReadPosRankSum=2.816;VQSLOD=3.0889;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:32.55:0,33,383	0/0:4,0:4:3.86:0,4,25	./.	0/0:16,0:4:8.93:0,9,101	./.	0/0:16,0:15:12.04:0,12,163	0/0:16,0:14:12:0,12,116	0/1:34,0:28:99:130,0,348	1/1:18,2:20:18.44:185,18,0	0/1:38,0:34:43.77:466,0,44	1/1:18,0:17:12.02:133,12,0	0/0:27,0:27:32.95:0,33,411	0/0:33,0:33:77.37:0,77,939	0/0:19,0:19:35.40:0,35,404	1/1:28,2:28:20.99:214,21,0	1/1:27,1:26:38.57:412,39,0	1/1:23,0:22:21.61:298,22,0	1/1:14,1:15:21.49:223,21,0	0/1:20,1:18:7.67:220,0,8	0/1:27,0:24:1.99:170,0,2	0/1:16,0:15:32.17:51,0,32	0/1:18,0:17:9.95:10,0,111	0/0:19,0:19:29.94:0,30,372	0/0:21,0:21:38.42:0,38,421	0/0:25,0:25:19.08:0,19,506	0/1:31,2:30:99:335,0,114	1/1:21,1:22:36.57:329,37,0	0/1:10,2:12:0.08:166,0,0
chr10	14777398	.	A	AATG	20928.87	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-11.913;DP=726;FS=0.578;HRun=0;HaplotypeScore=101.3878;InbreedingCoeff=0.9982;MQ=79.62;MQ0=0;MQRankSum=-6.547;QD=56.26;ReadPosRankSum=-0.521;VQSLOD=6.6320;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:60,0:60:99:0,166,2758	1/1:1,9:10:30.10:661,30,0	0/0:24,0:24:68.82:0,69,1105	0/0:19,0:19:31.01:0,31,536	0/0:21,0:21:60.19:0,60,996	0/0:17,0:17:48.15:0,48,791	0/0:23,0:23:69.22:0,69,1147	1/1:9,20:29:78.27:1734,78,0	1/1:2,28:30:81.28:1821,81,0	1/1:3,20:23:66.17:1380,66,0	1/1:1,8:9:21.07:446,21,0	0/0:22,0:22:66.23:0,66,1124	0/0:26,0:26:75.25:0,75,1250	0/0:42,0:42:99:0,117,1932	1/1:0,28:28:69.24:1573,69,0	1/1:3,26:30:75.26:1699,75,0	1/1:6,31:38:81.04:1779,81,0	1/1:3,21:24:60.20:1288,60,0	1/1:5,14:20:50.16:1011,50,0	1/1:0,23:23:69.24:1558,69,0	1/1:1,42:45:99:2328,105,0	0/0:23,0:23:63.16:0,63,1013	0/0:22,0:22:66.23:0,66,1125	0/0:36,0:36:99:0,102,1701	0/0:19,0:19:57.20:0,57,972	1/1:3,18:22:60.21:1348,60,0	1/1:5,28:33:87.30:1915,87,0	1/1:1,7:8:18.06:387,18,0
chr10	14779274	.	AT	A	7401.50	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=6.004;DP=569;FS=30.475;HRun=11;HaplotypeScore=68.4288;InbreedingCoeff=0.9777;MQ=74.13;MQ0=1;MQRankSum=-3.327;QD=19.38;ReadPosRankSum=4.518;VQSLOD=3.8231;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:60.09:0,60,618	1/1:3,13:16:38.94:320,39,0	0/0:27,1:23:12.89:0,13,346	0/0:10,0:10:24.27:0,24,237	1/1:2,25:29:52.95:614,53,0	1/1:1,17:18:21.96:387,22,0	1/1:4,11:15:15.31:250,15,0	1/1:4,18:23:49.92:394,50,0	1/1:1,14:15:35.96:296,36,0	1/1:7,17:24:53.92:443,54,0	1/1:3,28:31:48.91:608,49,0	0/0:13,0:13:33.05:0,33,335	0/0:17,1:18:23.43:0,23,436	0/0:11,1:13:8.22:0,8,264	1/1:3,25:29:76.83:621,77,0	1/1:2,16:19:12.94:313,13,0	1/1:4,25:29:71.89:591,72,0	1/1:1,13:14:38.94:320,39,0	1/1:2,12:14:32.94:271,33,0	1/1:4,24:29:67.91:548,68,0	1/1:1,7:8:20.98:172,21,0	0/0:17,0:17:27.07:0,27,288	0/0:25,0:25:66.17:0,66,703	0/0:16,0:16:45.09:0,45,471	0/0:20,2:22:29.48:0,29,513	1/1:6,22:28:65.91:542,66,0	1/1:4,18:22:25.91:369,26,0	1/1:6,13:19:41.92:342,42,0
chr10	14780022	.	GA	G	6864.14	PASS	AB=0.913;AC=54;AF=0.964;AN=56;BaseQRankSum=3.983;DP=696;FS=17.213;HRun=1;HaplotypeScore=137.7919;InbreedingCoeff=-0.0443;MQ=66.73;MQ0=0;MQRankSum=-0.337;QD=9.86;ReadPosRankSum=8.463;VQSLOD=0.6861;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:39,0:38:94.36:445,94,0	1/1:16,0:16:41.18:186,41,0	1/1:16,6:20:26.23:102,26,0	0/1:15,4:19:53.93:82,0,54	0/1:17,0:17:10.65:115,0,11	1/1:22,0:22:27.56:212,28,0	1/1:40,0:40:38.85:382,39,0	1/1:28,0:28:66.31:271,66,0	1/1:26,0:26:39.95:296,40,0	1/1:19,0:19:16.69:117,17,0	1/1:11,0:11:30.58:153,31,0	1/1:27,0:27:49.35:311,49,0	1/1:16,0:16:44.07:205,44,0	1/1:21,0:21:58.55:294,59,0	1/1:25,0:25:69.42:344,69,0	1/1:30,0:30:58.54:377,59,0	1/1:39,0:39:48.15:352,48,0	1/1:37,0:37:50.56:363,51,0	1/1:21,0:21:2.06:143,2,0	1/1:17,0:17:43.77:197,44,0	1/1:55,0:55:91.57:525,92,0	1/1:19,0:19:24.37:178,24,0	1/1:17,0:17:18.02:166,18,0	1/1:45,0:45:18.89:340,19,0	1/1:16,0:16:38.02:168,38,0	1/1:21,0:21:53.18:212,53,0	1/1:24,0:24:45.40:237,45,0	1/1:7,0:7:19.53:92,20,0
chr10	14780233	.	G	GA	1576.74	PASS	AB=1.000;AC=38;AF=0.679;AN=56;BaseQRankSum=6.455;DP=569;FS=0.477;HRun=13;HaplotypeScore=85.6237;InbreedingCoeff=0.6935;MQ=53.66;MQ0=11;MQRankSum=-4.035;QD=3.86;ReadPosRankSum=-2.755;VQSLOD=0.5556;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:35:35.73:0,36,348	1/1:9,0:10:5.75:28,6,0	0/1:20,0:11:13.45:13,0,29	0/1:21,0:5:9.41:9,0,10	1/1:5,18:24:33.46:336,33,0	1/1:5,16:22:26.71:223,27,0	1/1:14,8:26:28.75:354,29,0	1/1:27,0:27:16.54:88,17,0	1/1:8,1:16:2.84:14,3,0	1/1:8,0:22:16.31:85,16,0	1/1:4,0:19:9.80:56,10,0	0/0:20,1:23:21.12:0,21,256	0/0:17,0:17:32.45:0,32,225	0/0:21,0:20:30.10:0,30,253	1/1:6,0:14:3.22:14,3,0	1/1:10,0:24:8.56:43,9,0	1/1:33,0:32:16.50:76,17,0	1/1:6,0:20:8.28:39,8,0	1/1:14,0:26:27.45:110,27,0	1/1:5,0:15:5.68:28,6,0	1/1:2,1:4:2.84:15,3,0	0/0:11,0:13:27.85:0,28,174	0/0:10,0:10:14.86:0,15,102	0/0:27,0:28:42.20:0,42,406	0/0:11,0:13:8.63:0,9,129	1/1:12,0:24:30.32:124,30,0	1/1:23,0:25:11.58:66,12,0	1/1:8,0:8:8.78:53,9,0
chr10	14784379	.	AACACACACACACAC	A	5502.53	PASS	AB=0.717;AC=23;AF=0.426;AN=54;BaseQRankSum=3.364;DP=575;FS=47.194;HRun=0;HaplotypeScore=203.9040;InbreedingCoeff=0.1817;MQ=64.41;MQ0=15;MQRankSum=-1.502;QD=16.23;ReadPosRankSum=-3.136;VQSLOD=2.2227;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:31:11.87:0,12,95	1/1:0,9:10:12.04:451,12,0	0/0:21,0:13:3.01:0,3,42	0/0:43,0:30:5.67:0,6,50	1/1:3,0:21:5.72:108,6,0	1/1:9,0:21:12.04:334,12,0	0/0:15,0:15:14.87:0,15,112	1/1:30,0:28:20.55:259,21,0	0/1:10,11:21:60.92:285,0,61	0/1:9,14:23:37.22:881,0,37	1/1:4,9:13:4.21:23,4,0	0/0:8,0:16:12.01:0,12,175	0/0:6,0:13:14.98:0,15,220	0/0:5,0:15:6.02:0,6,127	0/1:9,10:19:2.55:128,0,3	1/1:6,9:15:3.01:116,3,0	0/1:25,5:30:11.13:535,0,11	0/1:9,8:17:9.73:339,0,10	0/1:9,6:16:11.52:372,0,12	./.	0/1:40,0:36:51.34:165,0,51	0/0:7,0:11:0:0,0,0	0/0:8,0:15:2.29:0,2,22	0/0:14,0:27:2.99:0,3,24	0/0:8,0:13:9.02:0,9,191	0/1:14,8:23:59.68:459,0,60	1/1:13,2:19:17.57:383,18,0	0/1:5,15:21:1.23:665,0,1
chr10	14784659	.	G	GCTGCTCCACGTAGTC	9794.78	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-2.850;DP=725;FS=17.248;HRun=0;HaplotypeScore=289.7248;InbreedingCoeff=0.9980;MQ=79.04;MQ0=0;MQRankSum=-11.693;QD=130.60;ReadPosRankSum=0.116;VQSLOD=3.7173;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,138,5647	0/0:11,0:11:27.09:0,27,1102	0/0:20,0:20:51.07:0,51,1801	0/0:18,0:18:42.13:0,42,1303	1/1:16,7:24:24.08:1781,24,0	1/1:10,12:23:54.19:3749,54,0	1/1:17,9:28:73.66:4265,74,0	0/0:27,0:27:63.21:0,63,2477	0/0:24,0:24:66.20:0,66,2699	0/0:31,0:31:85.56:0,86,3424	0/0:14,0:14:39.13:0,39,1681	0/0:32,0:32:96.31:0,96,4028	0/0:27,0:27:81.28:0,81,3338	0/0:32,0:32:93.31:0,93,3894	0/0:31,0:31:93.32:0,93,4009	0/0:27,0:27:81.26:0,81,3275	0/0:37,0:37:99:0,108,4496	0/0:27,0:27:81.22:0,81,3218	0/0:12,0:12:30.10:0,30,956	0/0:18,0:18:54.17:0,54,2236	0/0:53,0:53:99:0,147,6058	0/0:11,0:11:24.08:0,24,998	0/0:22,0:22:60.21:0,60,2467	0/0:30,0:30:84.27:0,84,3552	0/0:20,0:20:57.20:0,57,2499	0/0:33,0:33:87.29:0,87,3665	0/0:24,0:24:72.23:0,72,3002	0/0:23,0:23:69.20:0,69,2752
chr10	14790819	.	TTCTCTCTC	T	878.46	PASS	AC=6;AF=0.115;AN=52;BaseQRankSum=-1.449;DP=541;FS=1.023;HRun=0;HaplotypeScore=150.7351;InbreedingCoeff=0.6342;MQ=55.68;MQ0=17;MQRankSum=-4.154;QD=14.17;ReadPosRankSum=-1.134;VQSLOD=2.8611;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:16:3.01:0,3,56	0/0:10,0:9:6.02:0,6,191	./.	./.	1/1:19,5:24:11.95:190,12,0	1/1:11,5:16:15.08:432,15,0	1/1:16,6:21:20.96:388,21,0	0/0:29,0:28:6.02:0,6,120	0/0:15,0:16:21.07:0,21,721	0/0:20,0:20:27.09:0,27,811	0/0:11,0:11:3.01:0,3,101	0/0:24,0:22:24.08:0,24,572	0/0:8,0:8:9.03:0,9,207	0/0:19,0:19:21.05:0,21,504	0/0:14,0:14:9.03:0,9,295	0/0:17,0:16:15.05:0,15,408	0/0:28,0:28:45.63:0,46,1416	0/0:9,0:10:8.90:0,9,156	0/0:37,0:37:37.84:0,38,1002	0/0:8,0:8:9.02:0,9,248	0/0:15,0:14:18.53:0,19,375	0/0:11,0:11:9.03:0,9,267	0/0:9,0:9:6.02:0,6,163	0/0:16,0:18:12.51:0,13,330	0/0:15,0:17:9.03:0,9,190	0/0:25,0:25:18.03:0,18,422	0/0:17,0:17:6.02:0,6,157	0/0:21,0:19:6.01:0,6,99
chr10	14790881	.	TTGTGTGTGTG	T	711.75	PASS	AB=0.659;AC=11;AF=0.220;AN=50;BaseQRankSum=2.311;DP=456;FS=8.155;HRun=0;HaplotypeScore=126.1976;InbreedingCoeff=0.6843;MQ=40.58;MQ0=59;MQRankSum=-4.330;QD=7.49;ReadPosRankSum=-0.824;VQSLOD=1.5749;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:18:15.05:0,15,587	0/0:3,0:3:3.01:0,3,76	./.	./.	0/0:9,0:10:9.03:0,9,234	0/0:15,0:14:5.54:0,6,142	0/0:29,0:32:35.81:0,36,758	0/0:20,0:15:27.08:0,27,539	0/0:6,0:13:6.02:0,6,182	0/0:19,0:15:16.46:0,16,376	0/0:7,0:8:6.02:0,6,153	0/0:22,0:18:6.02:0,6,298	0/0:11,0:11:15.03:0,15,338	0/0:17,0:17:18.06:0,18,803	1/1:8,8:15:9.03:228,9,0	1/1:9,8:15:11.53:239,12,0	0/0:19,0:17:23.90:0,24,452	1/1:9,0:8:5.95:99,6,0	1/1:13,1:10:11.52:220,12,0	1/1:8,3:11:2.95:70,3,0	0/1:13,14:23:0.06:0,0,0	0/0:13,0:11:9.03:0,9,327	0/0:9,0:9:18.06:0,18,803	0/0:30,0:30:51.06:0,51,1959	0/0:15,0:15:12.04:0,12,537	0/0:17,0:17:24.07:0,24,554	0/0:4,0:8:6.02:0,6,182	./.
chr10	14790997	.	A	ATG	244.17	PASS	AB=0.960;AC=3;AF=0.054;AN=56;BaseQRankSum=-1.847;DP=464;FS=1.246;HRun=0;HaplotypeScore=71.0196;InbreedingCoeff=0.4525;MQ=67.51;MQ0=16;MQRankSum=0.270;QD=5.96;ReadPosRankSum=0.434;VQSLOD=2.8186;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:33.10:0,33,393	0/0:3,0:3:3.01:0,3,36	0/0:59,0:29:17.57:0,18,221	0/0:53,0:18:8.11:0,8,94	0/0:6,0:6:15.05:0,15,180	0/0:14,0:13:24.07:0,24,287	0/0:24,0:23:50.98:0,51,579	0/0:19,0:19:27.06:0,27,303	0/0:11,0:11:21.04:0,21,231	0/0:14,0:15:26.91:0,27,302	0/0:7,0:7:21.05:0,21,241	1/1:5,12:17:21.07:336,21,0	0/0:3,0:3:6.02:0,6,72	0/0:14,0:14:6.60:0,7,298	0/0:12,0:12:24.07:0,24,288	0/0:7,0:7:15.05:0,15,180	0/0:11,0:11:24.07:0,24,288	0/0:12,0:12:24.07:0,24,288	0/1:21,1:23:0.17:0,0,431	0/0:4,0:4:9.02:0,9,97	0/0:48,0:49:96.02:0,96,1113	0/0:4,0:4:9.03:0,9,108	0/0:5,0:5:6.02:0,6,72	0/0:34,0:34:72.18:0,72,838	0/0:9,0:9:16.29:0,16,183	0/0:16,0:16:21.05:0,21,241	0/0:7,0:7:12.04:0,12,144	0/0:6,0:6:12.02:0,12,132
chr10	14791059	.	TGGTGGTG	T	311.69	PASS	AB=1.000;AC=17;AF=0.340;AN=50;BaseQRankSum=1.443;DP=201;FS=10.953;HRun=0;HaplotypeScore=62.2003;InbreedingCoeff=-0.0347;MQ=44.83;MQ0=15;MQRankSum=-0.076;QD=2.73;ReadPosRankSum=-3.290;VQSLOD=-0.6987;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:11,0:10:27.96:28,0,38	0/0:1,0:1:3.01:0,3,38	./.	./.	1/1:6,0:6:2.19:10,2,0	0/1:11,0:8:10.49:10,0,13	0/1:15,0:14:15.61:16,0,250	1/1:6,0:4:2.96:31,3,0	0/0:6,0:6:8.01:0,8,80	0/0:4,0:4:8.92:0,9,82	0/0:2,0:2:6.02:0,6,77	1/1:5,0:4:9.03:114,9,0	0/0:6,0:6:12.04:0,12,177	0/1:6,0:6:39.01:39,0,66	0/0:4,0:3:8.63:0,9,140	0/1:5,0:4:22.60:23,0,57	0/0:8,0:8:9:0,9,217	0/0:4,0:4:7.87:0,8,40	0/0:5,0:4:7.72:0,8,66	0/0:6,0:6:11.71:0,12,159	0/0:24,0:23:26.14:0,26,1099	0/0:3,4:7:6.02:0,6,87	1/1:3,0:3:1.50:36,2,0	0/1:27,0:25:42.82:43,0,537	0/1:7,0:7:35.18:35,0,119	0/1:7,0:6:31.63:32,0,53	0/1:5,0:5:43.68:44,0,54	./.
chr10	14791065	.	TG	T	1242.62	PASS	AB=0.799;AC=35;AF=0.648;AN=54;BaseQRankSum=-2.441;DP=235;FS=2.791;HRun=2;HaplotypeScore=49.6113;InbreedingCoeff=0.2684;MQ=46.10;MQ0=18;MQRankSum=1.476;QD=7.27;ReadPosRankSum=0.678;VQSLOD=0.9676;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,5:9:3.55:70,4,0	1/1:0,1:1:3.01:36,3,0	0/0:4,0:1:2.80:0,3,13	./.	1/1:3,3:6:2.60:10,3,0	1/1:10,3:9:5.69:20,6,0	0/1:10,6:15:22.33:68,0,22	1/1:9,0:4:4.25:34,4,0	1/1:8,0:8:1.14:33,1,0	1/1:5,1:6:8.65:67,9,0	1/1:0,2:2:3.01:36,3,0	1/1:0,7:6:12.04:152,12,0	1/1:1,8:9:9.03:111,9,0	1/1:2,5:6:12.92:152,13,0	0/0:5,0:4:8.63:0,9,64	0/1:5,1:5:19.86:20,0,44	0/0:9,0:9:1.53:0,2,21	0/0:5,0:5:11.73:0,12,57	0/0:7,0:5:1.36:0,1,3	0/0:6,0:6:11.71:0,12,88	0/0:25,0:24:20.27:0,20,297	1/1:5,1:6:6.01:61,6,0	1/1:2,4:6:2.78:38,3,0	0/1:17,10:25:65.49:163,0,65	0/1:6,3:9:79.13:105,0,79	0/1:13,1:13:0.88:87,0,1	1/1:6,0:6:10.47:79,10,0	1/1:2,1:3:6.01:62,6,0
chr10	14791066	.	G	GTGT	1783.78	PASS	AB=0.888;AC=31;AF=0.574;AN=54;BaseQRankSum=-1.443;DP=261;FS=8.869;HRun=0;HaplotypeScore=68.1911;InbreedingCoeff=0.1678;MQ=44.81;MQ0=18;MQRankSum=-2.939;QD=9.39;ReadPosRankSum=-1.794;VQSLOD=1.6194;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:10,0:9:0.01:31,0,0	1/1:2,0:2:3.01:36,3,0	0/0:4,0:1:2.80:0,3,13	./.	1/1:10,0:11:2.69:20,3,0	1/1:9,0:10:8.71:163,9,0	0/1:16,0:17:17.56:270,0,18	1/1:10,0:6:9.78:107,10,0	1/1:2,7:10:2.25:35,2,0	1/1:10,0:10:21.06:340,21,0	1/1:3,0:3:3.01:36,3,0	0/0:8,0:7:4.21:0,4,10	1/1:9,0:9:8.86:86,9,0	1/1:7,0:6:2.20:51,2,0	0/0:5,0:4:9.03:0,9,120	0/1:7,0:6:32.12:32,0,150	0/1:4,5:10:17.89:68,0,18	0/0:5,0:5:1.44:0,1,87	0/0:6,0:4:0.47:0,0,1	0/0:6,0:6:12.04:0,12,162	0/0:26,0:24:21.26:0,21,356	1/1:7,0:7:6.01:61,6,0	0/0:6,0:6:1.37:0,1,3	0/1:25,0:24:16.33:16,0,166	0/1:10,0:10:99:115,0,147	0/1:11,0:15:23.47:252,0,23	1/1:1,0:6:11.68:135,12,0	1/1:3,0:3:6.02:85,6,0
chr10	14791068	.	T	TG	571.45	PASS	AB=0.983;AC=10;AF=0.185;AN=54;BaseQRankSum=-3.461;DP=279;FS=1.764;HRun=2;HaplotypeScore=66.8444;InbreedingCoeff=0.4613;MQ=44.83;MQ0=19;MQRankSum=1.323;QD=6.88;ReadPosRankSum=1.216;VQSLOD=0.9514;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:10:4.22:0,4,30	0/0:3,0:3:5.99:0,6,48	0/0:6,0:2:2.84:0,3,14	./.	0/0:12,0:12:0.45:0,0,1	0/0:13,0:10:8.30:0,8,97	0/0:19,0:17:15.22:0,15,157	0/0:11,0:6:9.35:0,9,44	0/0:11,0:11:1.91:0,2,14	0/0:10,0:10:20.84:0,21,155	0/0:3,0:3:2.99:0,3,23	0/0:10,0:9:13.38:0,13,65	0/0:10,0:9:8.98:0,9,77	0/0:7,0:6:13.68:0,14,84	1/1:5,1:5:11.48:99,11,0	0/1:8,0:7:17.54:64,0,18	0/0:10,0:10:7.98:0,8,47	1/1:6,1:7:10.67:67,11,0	0/0:6,0:4:1.54:0,2,5	1/1:4,2:6:11.92:107,12,0	1/1:25,2:25:30:375,30,0	0/0:7,0:7:5.98:0,6,48	0/0:7,0:7:2.57:0,3,10	0/1:28,1:27:8.21:8,0,190	0/0:10,0:10:20.21:0,20,189	0/0:16,0:15:26.02:0,26,196	0/0:6,0:6:10.25:0,10,69	0/0:3,0:3:5.63:0,6,30
chr10	14791098	.	TGC	T	2175.96	PASS	AB=0.975;AC=32;AF=0.571;AN=56;BaseQRankSum=0.644;DP=366;FS=0.000;HRun=0;HaplotypeScore=63.7920;InbreedingCoeff=0.5951;MQ=78.01;MQ0=12;MQRankSum=-3.109;QD=10.77;ReadPosRankSum=0.056;VQSLOD=3.1304;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:29.76:0,30,231	1/1:4,0:4:5.66:48,6,0	0/0:29,0:21:56.67:0,57,469	0/0:25,0:20:59.53:0,60,504	1/1:11,0:11:5.83:38,6,0	0/1:14,0:13:27.40:55,0,27	0/1:19,0:17:12.47:84,0,12	1/1:12,0:10:26.04:222,26,0	1/1:13,0:13:11.73:87,12,0	0/1:15,0:15:1:137,0,1	1/1:4,0:4:5.84:39,6,0	0/0:12,0:11:26.94:0,27,245	0/0:12,0:11:4.79:0,5,56	0/0:11,0:10:23.79:0,24,203	1/1:8,6:13:32.66:290,33,0	1/1:5,4:8:16.85:203,17,0	1/1:16,0:15:19.21:163,19,0	0/1:8,1:9:3.01:176,0,3	1/1:9,1:9:26.96:230,27,0	1/1:2,3:5:14.77:169,15,0	1/1:22,1:22:29.13:264,29,0	0/0:5,0:5:3.01:0,3,45	0/0:6,0:6:2.75:0,3,31	0/0:37,0:37:63.63:0,64,666	0/0:12,0:12:29.92:0,30,363	1/1:13,0:13:3.79:62,4,0	1/1:7,0:7:5.24:59,5,0	1/1:4,0:4:7.87:44,8,0
chr10	14791153	.	C	CT	1230.49	PASS	AB=0.800;AC=12;AF=0.222;AN=54;BaseQRankSum=-1.699;DP=420;FS=1.824;HRun=10;HaplotypeScore=62.5256;InbreedingCoeff=0.6922;MQ=79.48;MQ0=0;MQRankSum=-0.242;QD=14.31;ReadPosRankSum=-1.756;VQSLOD=3.4523;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:60.73:0,61,556	0/0:10,0:10:23.79:0,24,211	0/0:21,0:19:9.01:0,9,141	0/1:18,0:18:10.84:11,0,70	./.	0/0:17,0:17:34.99:0,35,277	0/0:16,1:17:15.95:0,16,337	0/0:20,0:20:44.92:0,45,368	0/0:14,0:15:37.99:0,38,301	0/0:12,0:12:29.96:0,30,246	0/0:10,0:9:14.94:0,15,120	0/0:11,0:11:26.96:0,27,222	0/0:15,0:16:37.99:0,38,301	0/0:18,0:19:40.95:0,41,326	1/1:4,11:15:11.44:326,11,0	1/1:2,10:12:21.05:224,21,0	0/0:18,0:19:52.98:0,53,424	1/1:1,10:11:5.45:263,5,0	1/1:4,7:11:2.42:227,2,0	0/1:2,4:6:9.14:114,0,9	1/1:9,3:13:20.18:229,20,0	0/0:12,0:13:32:0,32,252	0/0:6,0:6:17.98:0,18,148	0/0:46,3:50:47.26:0,47,950	0/0:11,0:12:25.99:0,26,200	0/0:14,0:15:34.98:0,35,277	0/0:13,0:13:25.20:0,25,219	0/0:3,0:4:7.94:0,8,48
chr10	14794346	.	C	CG	2083.70	PASS	AC=12;AF=0.222;AN=54;BaseQRankSum=6.398;DP=559;FS=2.448;HRun=1;HaplotypeScore=106.5668;InbreedingCoeff=0.9541;MQ=72.03;MQ0=0;MQRankSum=-4.210;QD=17.96;ReadPosRankSum=-2.834;VQSLOD=3.1185;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,1:49:99:0,128,1598	0/0:8,0:8:14.07:0,14,80	0/0:23,0:21:31.75:0,32,373	0/0:15,0:12:23.85:0,24,200	0/0:15,0:11:14.24:0,14,122	0/0:7,0:6:17.88:0,18,134	0/0:16,0:16:34.14:0,34,257	0/0:25,0:25:56.32:0,56,465	0/0:16,0:15:24.92:0,25,217	0/0:19,0:17:36.33:0,36,289	0/0:12,0:12:25.86:0,26,189	0/0:23,0:23:54.12:0,54,732	0/0:23,0:23:63.07:0,63,688	0/0:32,0:31:78.10:0,78,866	1/1:17,2:18:50.63:433,51,0	1/1:14,0:14:31.86:303,32,0	0/0:8,0:8:6.01:0,6,71	1/1:17,2:19:46.79:408,47,0	1/1:19,0:19:47.78:381,48,0	1/1:22,3:24:41.85:488,42,0	1/1:18,2:20:29.39:255,29,0	0/0:33,0:33:87.95:0,88,1024	0/0:22,0:22:59.49:0,59,762	0/0:29,0:29:84.22:0,84,1031	0/0:32,0:32:87.03:0,87,1083	0/0:22,0:20:38.07:0,38,318	0/0:11,0:10:8.05:0,8,80	./.
chr10	14794347	.	G	GGTTTTT	10197.15	PASS	AB=0.994;AC=31;AF=0.554;AN=56;BaseQRankSum=12.740;DP=654;FS=9.215;HRun=0;HaplotypeScore=203.3475;InbreedingCoeff=0.4746;MQ=67.23;MQ0=0;MQRankSum=-13.577;QD=25.82;ReadPosRankSum=-6.291;VQSLOD=2.3024;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:49:99:0,141,2956	1/1:9,0:10:12.10:125,12,0	0/1:21,0:21:7.70:8,0,347	0/0:16,0:13:22.74:0,23,267	1/1:24,0:20:24.08:482,24,0	1/1:10,0:9:13.58:128,14,0	0/1:16,0:16:71.49:113,0,71	0/1:36,0:34:99:404,0,230	0/1:21,0:20:73.92:243,0,74	0/1:26,0:23:61.46:320,0,61	0/1:17,0:16:47.51:188,0,48	0/0:21,0:22:52.86:0,53,1139	0/0:21,0:24:65.81:0,66,1156	0/0:31,0:30:87.04:0,87,1408	1/1:22,1:22:63.12:1190,63,0	1/1:17,0:17:51.15:982,51,0	1/1:14,0:14:5.16:302,5,0	1/1:18,0:20:54.12:1116,54,0	1/1:22,2:24:66.07:1141,66,0	1/1:25,7:31:93.19:1987,93,0	1/1:21,0:22:50.85:619,51,0	0/0:29,0:33:95.31:0,95,1735	0/0:22,0:23:66.17:0,66,1377	0/0:29,0:29:86.81:0,87,1815	0/0:30,0:32:93.26:0,93,1929	0/1:29,0:26:99:260,0,105	1/1:17,0:16:13.38:425,13,0	1/1:13,0:8:12.02:164,12,0
chr10	14794376	.	T	TTTG	7057.48	PASS	AB=0.683;AC=35;AF=0.625;AN=56;BaseQRankSum=-6.121;DP=617;FS=5.400;HRun=0;HaplotypeScore=121.3816;InbreedingCoeff=0.8775;MQ=55.40;MQ0=3;MQRankSum=-1.868;QD=20.94;ReadPosRankSum=-4.384;VQSLOD=3.6966;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:44:96.17:0,96,1176	1/1:6,3:9:9.03:172,9,0	0/0:36,0:22:24.07:0,24,300	0/0:34,0:16:9.01:0,9,105	1/1:15,9:21:26.96:397,27,0	1/1:5,2:6:6.02:118,6,0	1/1:4,14:18:18.06:354,18,0	1/1:19,12:30:30.06:473,30,0	1/1:14,8:22:46.74:841,47,0	1/1:6,12:17:36.08:650,36,0	1/1:5,6:11:18.06:285,18,0	0/0:24,0:24:57.16:0,57,735	0/0:15,0:15:27.09:0,27,369	0/0:31,0:30:75.15:0,75,982	1/1:9,9:17:23.72:470,24,0	1/1:2,11:15:18.06:353,18,0	1/1:5,8:13:15.05:294,15,0	1/1:5,13:23:17.93:294,18,0	1/1:15,8:21:27.95:459,28,0	0/1:15,12:27:5.14:464,0,5	1/1:3,12:17:9.03:176,9,0	0/0:25,0:25:48.15:0,48,644	0/0:18,0:18:24.05:0,24,283	0/0:28,0:28:66.19:0,66,853	0/0:25,0:25:42.04:0,42,478	1/1:5,14:18:39.13:727,39,0	1/1:12,11:22:21.07:413,21,0	1/1:9,5:10:6.02:118,6,0
chr10	14796851	.	G	GA	1459.78	PASS	AB=0.950;AC=13;AF=0.241;AN=54;BaseQRankSum=-1.168;DP=456;FS=2.210;HRun=7;HaplotypeScore=80.7741;InbreedingCoeff=0.8615;MQ=41.30;MQ0=43;MQRankSum=-5.113;QD=13.03;ReadPosRankSum=-0.022;VQSLOD=3.0755;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:33:48.04:0,48,456	0/0:10,0:9:9.01:0,9,87	0/0:2,0:1:2.92:0,3,17	./.	0/0:14,0:14:21.02:0,21,202	0/0:22,0:22:42.01:0,42,393	0/0:23,0:21:42.04:0,42,400	0/0:17,0:16:36:0,36,337	0/1:18,1:16:6.30:6,0,224	0/0:21,0:20:42.06:0,42,405	0/0:13,0:12:30.02:0,30,283	0/0:18,0:16:30.01:0,30,289	0/0:17,0:15:23.83:0,24,224	0/0:20,0:17:33.01:0,33,318	1/1:7,9:12:30.02:326,30,0	1/1:5,10:13:30.04:345,30,0	0/0:27,0:24:38.65:0,39,354	1/1:12,6:12:20.98:232,21,0	1/1:12,4:14:20.36:186,20,0	1/1:6,15:19:34.92:402,35,0	1/1:4,3:7:12.04:145,12,0	0/0:9,0:9:21.02:0,21,202	0/0:21,0:18:30.35:0,30,313	0/0:21,0:19:33.03:0,33,316	0/0:12,0:12:33.02:0,33,310	0/0:11,0:11:21.01:0,21,196	0/0:15,0:12:24.03:0,24,230	0/0:11,0:8:17.99:0,18,170
chr10	14796879	.	AAAT	A	717.33	PASS	AB=0.991;AC=12;AF=0.214;AN=56;BaseQRankSum=7.137;DP=405;FS=3.132;HRun=0;HaplotypeScore=76.5529;InbreedingCoeff=0.2932;MQ=60.41;MQ0=9;MQRankSum=-1.308;QD=5.52;ReadPosRankSum=4.850;VQSLOD=1.5269;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:45.57:0,46,371	0/0:5,0:5:9.66:0,10,60	0/0:10,0:6:17.98:0,18,217	0/0:12,0:8:7.58:0,8,157	0/0:12,0:12:9.69:0,10,99	0/1:16,0:16:48.50:49,0,57	0/1:15,0:15:2.65:51,0,3	0/0:24,0:24:41.02:0,41,406	0/1:12,0:12:6.62:7,0,61	0/0:7,0:7:14.47:0,14,94	0/0:7,0:6:17.84:0,18,153	0/0:9,0:8:13.18:0,13,132	0/0:16,0:15:23.56:0,24,284	0/0:7,0:7:18:0,18,194	0/1:17,1:18:8.99:25,0,9	0/1:13,0:12:5.49:5,0,29	0/0:20,0:20:11.55:0,12,136	1/1:11,3:13:0.51:82,1,0	1/1:5,16:21:59.77:582,60,0	0/1:12,0:11:23.82:24,0,30	1/1:8,1:9:8.25:42,8,0	0/0:13,0:13:12.33:0,12,217	0/0:21,0:20:35.21:0,35,362	0/0:23,0:22:41.65:0,42,393	0/0:17,0:17:41.36:0,41,412	0/0:18,0:18:45.15:0,45,289	0/0:12,0:12:9.12:0,9,116	0/0:10,0:10:0.22:0,0,67
chr10	14796880	.	AAT	A	852.34	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=4.801;DP=378;FS=5.628;HRun=0;HaplotypeScore=65.0652;InbreedingCoeff=0.8272;MQ=63.77;MQ0=8;MQRankSum=-0.846;QD=11.84;ReadPosRankSum=3.286;VQSLOD=2.7451;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:33.33:0,33,213	0/0:5,0:5:5.48:0,5,45	0/0:11,0:7:20.96:0,21,211	0/0:12,0:8:7.47:0,7,137	0/0:12,0:12:21.37:0,21,126	0/0:16,0:16:24.08:0,24,113	0/0:15,0:15:26.65:0,27,111	0/0:23,0:23:49.88:0,50,365	0/0:12,0:12:2.04:0,2,43	0/0:8,0:8:11.38:0,11,94	0/0:8,0:7:20:0,20,134	0/0:7,0:6:8.97:0,9,84	0/0:16,0:15:34.87:0,35,250	0/0:7,0:7:17.44:0,17,146	1/1:9,4:13:11.09:133,11,0	1/1:10,1:10:5.79:62,6,0	0/0:20,0:20:19.43:0,19,128	1/1:9,3:12:20.63:175,21,0	1/1:20,0:21:59.56:459,60,0	1/1:5,3:7:13.30:119,13,0	1/1:6,1:7:8.96:78,9,0	0/0:14,0:14:23.10:0,23,200	0/0:20,0:19:34.37:0,34,280	0/0:17,0:16:34.08:0,34,265	0/0:16,0:16:29.27:0,29,238	0/0:18,0:18:18.07:0,18,186	0/0:12,0:12:6.94:0,7,85	0/0:11,0:11:11.12:0,11,60
chr10	14796881	.	AT	A	691.25	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=4.370;DP=370;FS=2.939;HRun=1;HaplotypeScore=59.4510;InbreedingCoeff=0.9053;MQ=67.39;MQ0=5;MQRankSum=-0.802;QD=10.02;ReadPosRankSum=1.207;VQSLOD=1.4523;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:30.13:0,30,156	0/0:5,0:5:8.81:0,9,59	0/0:13,0:9:22.46:0,22,195	0/0:12,0:8:7.39:0,7,124	0/0:12,0:12:25.18:0,25,143	0/0:16,0:16:32.45:0,32,167	0/0:15,0:15:33.39:0,33,171	0/0:24,0:24:67.33:0,67,484	0/0:12,0:12:14.98:0,15,94	0/0:8,0:8:17.62:0,18,124	0/0:7,0:7:16.70:0,17,98	0/0:7,0:7:11.92:0,12,89	0/0:16,0:15:35.01:0,35,225	0/0:8,0:8:22.94:0,23,172	1/1:5,7:12:11.86:91,12,0	1/1:2,7:8:5.97:57,6,0	0/0:19,0:19:25.77:0,26,158	1/1:11,1:12:20.75:149,21,0	1/1:21,0:21:59.16:414,59,0	1/1:7,1:7:13.53:79,14,0	1/1:2,5:7:8.92:77,9,0	0/0:13,0:13:20.43:0,20,177	0/0:17,0:17:16.93:0,17,202	0/0:16,0:15:38.78:0,39,225	0/0:14,0:14:31.63:0,32,192	0/0:19,0:19:44.38:0,44,287	0/0:12,0:12:30.31:0,30,178	0/0:11,0:11:17.37:0,17,99
chr10	14797955	.	ACACCACCACCACCAC	A	3071.51	PASS	AC=14;AF=0.292;AN=48;BaseQRankSum=3.748;DP=274;FS=4.031;HRun=0;HaplotypeScore=109.9769;InbreedingCoeff=0.5883;MQ=74.17;MQ0=1;MQRankSum=-5.540;QD=34.90;ReadPosRankSum=3.547;VQSLOD=2.4217;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:15.02:0,15,777	1/1:7,2:9:6.02:239,6,0	./.	0/0:19,0:15:2.04:0,2,6	0/0:2,0:2:2.37:0,2,8	0/0:8,0:8:12.04:0,12,859	0/0:16,0:16:15.05:0,15,1072	0/0:13,0:13:0.89:0,1,2	1/1:6,9:15:15.05:623,15,0	1/1:7,4:11:12.04:498,12,0	./.	0/0:8,0:8:12.04:0,12,641	0/0:3,0:7:8.31:0,8,238	0/0:7,0:10:8.96:0,9,409	0/0:6,0:6:3:0,3,25	0/0:8,0:8:9.03:0,9,567	1/1:11,4:15:6.18:368,6,0	./.	0/0:6,0:6:3.01:0,3,78	0/0:5,0:5:0.89:0,1,2	0/0:10,0:9:3.77:0,4,78	0/0:8,0:8:3.90:0,4,135	./.	0/0:6,0:6:3.01:0,3,194	0/0:8,0:8:3.01:0,3,88	1/1:7,2:9:6.02:249,6,0	1/1:10,8:19:24.08:997,24,0	1/1:8,2:10:6.02:249,6,0
chr10	14799540	.	A	AG	3586.96	PASS	AB=0.545;AC=11;AF=0.196;AN=56;BaseQRankSum=4.218;DP=571;FS=1.994;HRun=1;HaplotypeScore=71.8797;InbreedingCoeff=0.9096;MQ=92.21;MQ0=0;MQRankSum=-10.307;QD=36.98;ReadPosRankSum=-1.436;VQSLOD=3.5603;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,114,1479	0/0:7,0:7:21.07:0,21,273	0/0:30,0:30:84.27:0,84,1089	0/0:21,0:21:57.18:0,57,725	0/0:19,0:19:57.17:0,57,725	0/0:20,0:20:60.18:0,60,765	0/0:22,0:22:66.18:0,66,815	0/0:31,0:31:93.30:0,93,1193	0/0:23,0:23:69.22:0,69,896	0/0:23,0:23:69.21:0,69,872	0/0:16,0:16:48.16:0,48,623	0/0:20,0:20:60.18:0,60,762	0/0:23,0:23:69.22:0,69,896	0/0:19,0:19:57.19:0,57,740	1/1:0,19:19:57.19:853,57,0	0/1:2,10:12:5.85:414,0,6	0/0:39,0:39:99:0,114,1449	1/1:0,14:14:42.14:629,42,0	1/1:2,10:12:33.11:488,33,0	1/1:2,16:18:39.05:533,39,0	1/1:4,18:22:44.85:671,45,0	0/0:16,0:16:48.15:0,48,610	0/0:8,0:8:21.05:0,21,258	0/0:28,0:28:84.27:0,84,1091	0/0:18,0:18:51.15:0,51,647	0/0:22,0:22:66.21:0,66,857	0/0:20,0:20:57.12:0,57,693	0/0:10,0:10:30.10:0,30,390
chr10	14799563	.	ATTT	A	4069.27	PASS	AB=0.538;AC=11;AF=0.196;AN=56;BaseQRankSum=12.718;DP=539;FS=3.331;HRun=4;HaplotypeScore=88.5690;InbreedingCoeff=0.8857;MQ=86.45;MQ0=0;MQRankSum=-12.404;QD=40.69;ReadPosRankSum=-1.843;VQSLOD=2.1218;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,105,2431	0/0:7,0:7:21.07:0,21,485	0/0:20,0:20:57.09:0,57,1242	0/0:20,0:20:48.16:0,48,970	0/0:20,0:20:60.21:0,60,1420	0/0:19,0:19:57.20:0,57,1349	0/0:24,0:24:72.25:0,72,1706	0/0:23,0:23:63.22:0,63,1496	0/0:21,0:21:63.22:0,63,1491	0/0:21,0:21:63.22:0,63,1490	0/0:16,0:16:48.15:0,48,1090	0/0:17,0:17:48.15:0,48,1089	0/0:19,0:19:57.20:0,57,1348	0/0:18,0:18:54.19:0,54,1278	1/1:0,15:15:45.15:792,45,0	0/1:2,12:14:34.97:517,0,35	0/0:40,0:40:99:0,117,2768	1/1:2,18:20:39.13:688,39,0	1/1:1,16:17:48.11:787,48,0	1/1:0,12:12:36.12:634,36,0	1/1:3,19:22:39.09:652,39,0	0/0:15,0:15:42.14:0,42,976	0/0:9,0:9:27.09:0,27,639	0/0:26,0:26:78.27:0,78,1845	0/0:16,0:16:48.16:0,48,1135	0/0:23,0:23:63.22:0,63,1490	0/0:20,0:20:60.19:0,60,1370	0/0:10,0:10:30.10:0,30,709
chr10	14800187	.	C	CA	2778.29	PASS	AB=0.866;AC=39;AF=0.696;AN=56;BaseQRankSum=0.827;DP=484;FS=2.149;HRun=10;HaplotypeScore=104.0241;InbreedingCoeff=0.2565;MQ=49.41;MQ0=33;MQRankSum=-2.655;QD=7.39;ReadPosRankSum=-0.938;VQSLOD=2.0328;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:31,0:28:16.22:16,0,21	1/1:6,3:9:4.98:117,5,0	0/1:25,1:5:15.31:15,0,19	0/1:19,0:10:33.28:33,0,66	1/1:19,7:28:17.59:269,18,0	0/1:7,6:11:15.88:167,0,16	1/1:1,9:10:6.02:63,6,0	1/1:21,7:27:25.85:306,26,0	1/1:4,10:13:11.86:108,12,0	1/1:12,7:21:32.74:372,33,0	0/1:11,5:17:4.58:193,0,5	0/0:21,0:21:2.82:0,3,14	0/0:24,0:24:17.01:0,17,72	1/1:16,1:15:6.19:15,6,0	1/1:8,0:8:22.24:125,22,0	1/1:7,1:6:17.54:114,18,0	0/1:22,2:19:22.67:159,0,23	1/1:8,0:5:13.24:56,13,0	1/1:7,0:7:11.51:56,12,0	1/1:11,0:10:27.65:150,28,0	1/1:10,0:10:17.61:90,18,0	0/0:12,0:12:4.89:0,5,27	0/0:21,0:21:2.48:0,2,7	0/0:30,0:25:7.02:0,7,39	1/1:16,0:15:3.84:6,4,0	0/1:15,4:17:4.59:121,0,5	1/1:9,4:12:29.47:250,29,0	1/1:7,4:11:7.51:142,8,0
chr10	14800196	.	AAC	A	2680.04	PASS	AB=1.000;AC=34;AF=0.607;AN=56;BaseQRankSum=-8.335;DP=532;FS=0.000;HRun=0;HaplotypeScore=121.6879;InbreedingCoeff=0.2391;MQ=52.94;MQ0=19;MQRankSum=8.338;QD=6.22;ReadPosRankSum=0.181;VQSLOD=2.6964;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:29,3:29:47.29:471,47,0	0/1:10,0:10:4.98:42,0,5	0/0:39,0:8:3.50:0,4,44	0/1:29,0:14:10.59:11,0,139	0/1:27,0:26:0.20:167,0,0	0/1:17,0:15:26.55:100,0,27	1/1:11,0:11:6.95:37,7,0	1/1:29,0:28:7.28:249,7,0	1/1:13,0:13:6.38:36,6,0	0/1:23,0:22:5.63:107,0,6	0/1:17,0:17:26.90:69,0,27	1/1:17,1:18:13.78:131,14,0	1/1:20,5:25:5.52:320,6,0	1/1:16,0:15:32.52:156,33,0	0/0:11,0:11:32.45:0,32,216	0/1:11,0:11:6.73:7,0,158	0/1:24,0:21:38.58:131,0,39	0/0:8,0:7:19.95:0,20,141	0/0:17,0:13:32.80:0,33,252	0/0:12,0:12:32.74:0,33,234	0/0:14,0:14:27.83:0,28,181	1/1:10,0:10:0.39:42,0,0	1/1:21,0:21:39.14:271,39,0	1/1:33,1:31:0.89:131,1,0	1/1:16,0:16:27.82:124,28,0	0/1:18,0:17:1.02:83,0,1	1/1:17,0:16:10.07:148,10,0	0/1:13,0:11:3.83:23,0,4
chr10	14800197	.	AC	A	7035.38	PASS	AB=1.000;AC=42;AF=0.750;AN=56;BaseQRankSum=-9.825;DP=533;FS=10.035;HRun=1;HaplotypeScore=102.1931;InbreedingCoeff=0.8193;MQ=54.26;MQ0=17;MQRankSum=7.297;QD=16.40;ReadPosRankSum=1.284;VQSLOD=4.1865;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:17,15:29:77.10:872,77,0	1/1:10,0:10:24.13:148,24,0	0/0:40,0:8:11.75:0,12,82	0/1:32,0:15:6.45:6,0,150	1/1:27,0:26:50.08:316,50,0	1/1:18,0:16:31.86:227,32,0	1/1:11,0:11:11.85:88,12,0	1/1:26,2:27:40.66:393,41,0	1/1:12,0:12:12.28:80,12,0	1/1:22,1:22:52.08:295,52,0	1/1:16,0:16:24.77:225,25,0	1/1:2,16:18:26.95:327,27,0	1/1:16,9:25:57.22:630,57,0	1/1:11,6:16:46.23:504,46,0	0/0:11,0:11:32.41:0,32,214	0/1:11,0:11:9.55:10,0,160	1/1:23,0:21:32.27:248,32,0	0/0:8,0:7:19.88:0,20,142	0/0:19,0:15:38.59:0,39,288	0/0:12,0:12:32.75:0,33,251	0/0:14,0:14:24.38:0,24,151	1/1:7,4:11:24.88:273,25,0	1/1:8,13:21:56.98:689,57,0	1/1:5,26:28:39.99:534,40,0	1/1:0,15:15:30.10:414,30,0	1/1:18,0:17:37.95:271,38,0	1/1:16,1:16:45.30:299,45,0	1/1:13,0:12:25.48:186,25,0
chr10	14800225	.	A	AC	855.19	PASS	AB=0.650;AC=11;AF=0.196;AN=56;BaseQRankSum=11.435;DP=553;FS=4.636;HRun=1;HaplotypeScore=129.7536;InbreedingCoeff=0.8768;MQ=67.35;MQ0=8;MQRankSum=-9.043;QD=10.18;ReadPosRankSum=3.775;VQSLOD=1.9719;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:37:99:0,107,1338	0/0:11,0:11:33.02:0,33,435	0/0:36,0:19:44.77:0,45,465	0/0:35,0:22:11.55:0,12,286	0/0:19,0:19:57.10:0,57,738	0/0:20,0:20:54.15:0,54,736	0/0:16,0:16:36.04:0,36,419	0/0:29,0:29:75.32:0,75,968	0/0:15,0:15:36.12:0,36,477	0/0:25,0:25:69.05:0,69,799	0/0:14,0:14:41.70:0,42,521	0/0:19,0:19:39.01:0,39,485	0/0:23,0:23:69.14:0,69,892	0/0:7,0:7:21.07:0,21,291	1/1:7,8:15:27.27:169,27,0	0/1:6,7:13:16.01:125,0,16	0/0:24,0:23:60.15:0,60,766	1/1:3,6:9:23.37:169,23,0	1/1:13,5:18:14.85:163,15,0	1/1:1,11:12:32.67:228,33,0	1/1:8,8:16:25.83:178,26,0	0/0:12,0:12:36.09:0,36,469	0/0:22,0:22:63.12:0,63,806	0/0:38,0:37:67.23:0,67,936	0/0:13,0:13:27.08:0,27,354	0/0:15,0:15:42.14:0,42,570	0/0:18,0:17:54.06:0,54,650	0/0:19,0:19:57.05:0,57,758
chr10	14800226	.	A	ACAC	1856.11	PASS	AB=0.729;AC=10;AF=0.179;AN=56;BaseQRankSum=10.792;DP=556;FS=0.494;HRun=0;HaplotypeScore=146.5749;InbreedingCoeff=0.6860;MQ=68.18;MQ0=8;MQRankSum=-10.198;QD=21.58;ReadPosRankSum=4.096;VQSLOD=3.4984;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:38:99:0,102,1843	0/0:11,0:11:33.11:0,33,609	0/0:37,0:20:41.96:0,42,620	0/0:33,0:21:9.41:0,9,420	0/0:19,0:19:57.19:0,57,1028	0/0:20,0:20:54.66:0,55,1001	0/0:18,0:18:36.07:0,36,589	0/0:29,0:29:81.23:0,81,1359	0/0:15,0:15:36.12:0,36,669	0/0:25,0:25:66.21:0,66,1099	0/0:13,0:13:39.12:0,39,684	0/0:18,0:18:38.71:0,39,682	0/0:24,0:24:69.22:0,69,1222	0/0:7,0:7:21.07:0,21,391	1/1:7,8:15:23.80:375,24,0	0/1:7,7:14:49.57:270,0,50	0/0:24,0:23:57.18:0,57,1013	1/1:3,6:9:22.86:312,23,0	0/1:14,5:18:14.21:356,0,14	1/1:1,11:12:33.11:438,33,0	1/1:9,7:17:1.18:263,1,0	0/0:12,0:12:36.11:0,36,638	0/0:21,0:21:63.14:0,63,1063	0/0:38,0:37:75.26:0,75,1361	0/0:13,0:13:27.08:0,27,474	0/0:15,0:15:42.14:0,42,746	0/0:19,0:18:54.16:0,54,902	0/0:19,0:19:57.20:0,57,1038
chr10	14801382	.	CTT	C	8822.84	PASS	AB=0.957;AC=37;AF=0.661;AN=56;BaseQRankSum=11.697;DP=561;FS=3.645;HRun=11;HaplotypeScore=91.7844;InbreedingCoeff=0.9131;MQ=82.08;MQ0=2;MQRankSum=2.246;QD=23.10;ReadPosRankSum=4.664;VQSLOD=4.7477;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:51:99:0,134,1829	1/1:0,8:8:21.05:223,21,0	0/0:13,0:15:29.25:0,29,310	0/1:21,1:21:8.65:9,0,318	1/1:2,15:17:39.04:415,39,0	1/1:4,18:22:45.10:479,45,0	1/1:1,21:22:48.12:511,48,0	1/1:8,18:26:54.06:556,54,0	1/1:1,20:21:52.44:572,52,0	1/1:2,20:22:51.06:543,51,0	1/1:0,9:9:24.06:255,24,0	0/0:21,0:24:66.10:0,66,865	0/0:11,0:11:27.06:0,27,355	0/0:9,0:10:29.57:0,30,385	1/1:3,18:21:51.12:543,51,0	1/1:1,19:20:51.12:543,51,0	1/1:3,29:32:69.17:734,69,0	1/1:4,30:34:78.17:830,78,0	1/1:3,12:15:36.02:363,36,0	1/1:3,10:12:27.04:287,27,0	1/1:0,22:22:57.14:607,57,0	0/0:11,0:11:30.03:0,30,375	0/0:14,0:14:39.01:0,39,459	0/0:24,0:24:66.22:0,66,1016	0/0:17,0:17:44.50:0,44,617	1/1:2,22:25:62.86:651,63,0	1/1:2,21:23:60.15:639,60,0	1/1:1,7:8:6.01:64,6,0
chr10	14802628	.	AAC	A	2102.76	PASS	AB=0.835;AC=38;AF=0.731;AN=52;BaseQRankSum=1.268;DP=480;FS=0.962;HRun=0;HaplotypeScore=69.5193;InbreedingCoeff=0.1010;MQ=75.06;MQ0=11;MQRankSum=1.037;QD=5.71;ReadPosRankSum=2.283;VQSLOD=2.4965;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:20,3:22:15.03:153,15,0	1/1:3,2:5:6.02:65,6,0	./.	./.	0/0:11,0:16:9:0,9,77	0/0:12,0:19:11.99:0,12,102	0/0:14,0:18:9.01:0,9,97	1/1:19,0:18:2.97:20,3,0	0/1:14,4:18:25.02:85,0,25	1/1:16,4:19:12.50:130,12,0	0/1:8,2:10:26.31:26,0,38	0/1:7,4:10:32.31:85,0,32	1/1:6,0:11:14.20:70,14,0	1/1:12,0:17:5.47:28,5,0	1/1:11,6:18:14.87:143,15,0	0/1:8,3:12:29.27:96,0,29	1/1:9,5:14:9.02:97,9,0	0/1:16,0:17:43.75:44,0,113	1/1:12,3:15:5.95:51,6,0	1/1:3,4:7:9.02:97,9,0	1/1:23,4:29:23.67:213,24,0	1/1:6,5:11:6.01:65,6,0	0/1:11,6:16:26.50:115,0,26	1/1:27,6:34:18.24:315,18,0	1/1:10,6:16:9.02:97,9,0	0/1:13,1:14:17.94:26,0,18	0/1:12,0:13:8.13:8,0,38	1/1:4,5:12:26.57:236,27,0
chr10	14807061	.	G	GA	4166.58	PASS	AB=0.889;AC=19;AF=0.339;AN=56;BaseQRankSum=-10.107;DP=496;FS=19.712;HRun=9;HaplotypeScore=51.3152;InbreedingCoeff=0.9114;MQ=61.98;MQ0=4;MQRankSum=-0.690;QD=23.95;ReadPosRankSum=-1.295;VQSLOD=2.0081;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:31:83.96:0,84,729	1/1:2,5:7:21.06:232,21,0	0/0:10,0:10:23.94:0,24,196	0/0:12,0:11:29.94:0,30,259	0/0:13,0:13:23.80:0,24,208	0/0:17,0:17:41.98:0,42,365	0/1:14,2:16:21.37:21,0,293	1/1:5,30:32:84.21:920,84,0	1/1:2,5:6:15.04:166,15,0	1/1:2,12:13:33.09:365,33,0	1/1:1,8:9:21.06:232,21,0	0/0:20,0:19:41.98:0,42,365	0/0:14,0:13:35.98:0,36,312	0/0:20,0:19:37.59:0,38,358	0/0:16,0:15:38.96:0,39,335	0/0:15,0:15:44.99:0,45,391	1/1:3,17:18:45.12:498,45,0	0/0:21,0:21:38.94:0,39,330	0/0:27,0:24:38.93:0,39,565	0/0:24,0:24:68.99:0,69,599	0/0:23,0:23:59.98:0,60,520	0/0:6,0:6:12:0,12,104	0/0:14,0:14:38.99:0,39,338	0/0:21,0:21:50.98:0,51,443	0/0:16,0:16:44.99:0,45,391	1/1:4,26:30:75.20:830,75,0	1/1:5,18:23:25.10:505,25,0	1/1:0,12:12:36.10:398,36,0
chr10	14807261	.	TAA	T	5115.23	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=13.951;DP=507;FS=14.099;HRun=13;HaplotypeScore=73.0805;InbreedingCoeff=0.9714;MQ=56.22;MQ0=18;MQRankSum=4.818;QD=21.14;ReadPosRankSum=4.203;VQSLOD=2.7956;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,22:25:51.07:495,51,0	0/0:4,0:4:12.04:0,12,169	0/0:4,0:3:8.85:0,9,79	0/0:6,0:3:8.70:0,9,88	0/0:15,0:15:32.50:0,32,393	0/0:18,0:19:48.11:0,48,638	0/0:16,0:16:39.13:0,39,564	0/0:41,0:39:87.23:0,87,1206	0/0:14,0:16:38.61:0,39,499	0/0:23,0:23:51.12:0,51,696	0/0:17,0:17:45.11:0,45,623	1/1:0,14:15:38.79:361,39,0	1/1:0,11:11:27.04:262,27,0	1/1:3,13:16:27.02:262,27,0	1/1:1,22:23:60.10:582,60,0	1/1:2,20:22:54.05:524,54,0	0/0:26,0:24:66.21:0,66,923	1/1:5,16:19:45.04:436,45,0	1/1:9,12:20:36.02:349,36,0	1/1:2,24:27:71.82:681,72,0	1/1:1,11:12:30.04:291,30,0	1/1:1,5:6:15.02:145,15,0	1/1:2,10:11:24.04:233,24,0	1/1:2,7:8:11.52:116,12,0	1/1:5,15:19:39.05:378,39,0	0/0:29,0:30:80.39:0,80,1017	0/0:20,0:23:62.53:0,63,752	0/0:18,0:16:38.86:0,39,522
chr10	14807953	.	ACTAC	A	11070.50	PASS	AB=0.952;AC=29;AF=0.518;AN=56;BaseQRankSum=15.800;DP=488;FS=10.158;HRun=0;HaplotypeScore=95.6613;InbreedingCoeff=0.9509;MQ=84.96;MQ0=2;MQRankSum=-4.333;QD=41.31;ReadPosRankSum=5.339;VQSLOD=4.7525;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,30:31:75.26:1432,75,0	0/0:11,0:11:30.10:0,30,786	0/0:18,0:18:54.19:0,54,1410	0/0:18,0:18:54.16:0,54,1288	0/0:16,0:16:45.15:0,45,1204	0/0:15,0:15:36.12:0,36,962	0/0:20,0:20:54.19:0,54,1426	0/0:31,0:31:90.29:0,90,2331	0/0:15,0:15:36.12:0,36,970	0/0:12,0:12:36.12:0,36,954	0/0:6,0:6:18.06:0,18,493	1/1:0,14:14:42.14:813,42,0	1/1:1,13:14:33.11:639,33,0	1/1:1,11:12:30.10:581,30,0	1/1:0,25:25:66.23:1278,66,0	1/1:0,21:21:48.16:930,48,0	0/0:32,0:32:90.31:0,90,2405	1/1:1,23:23:54.19:1042,54,0	1/1:0,11:10:27.07:486,27,0	1/1:0,13:13:38.96:673,39,0	1/1:4,27:31:44.77:795,45,0	1/1:0,3:3:9.03:174,9,0	1/1:1,15:15:36.12:697,36,0	1/1:0,21:21:45.09:832,45,0	1/1:0,12:12:36.12:697,36,0	0/1:19,1:20:0.89:1,0,1421	0/0:18,0:18:54.14:0,54,1341	0/0:8,0:8:24.08:0,24,640
chr10	14809004	.	GGC	G	256.67	PASS	AB=0.822;AC=2;AF=0.036;AN=56;BaseQRankSum=5.397;DP=557;FS=5.050;HRun=0;HaplotypeScore=75.0809;InbreedingCoeff=-0.0384;MQ=88.73;MQ0=0;MQRankSum=0.029;QD=5.46;ReadPosRankSum=-3.129;VQSLOD=1.7596;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:57.20:0,57,1138	0/0:4,0:4:12.04:0,12,243	0/1:21,10:29:99:295,0,982	0/1:14,2:16:50.37:50,0,593	0/0:19,0:19:57.18:0,57,1121	0/0:12,0:12:33.11:0,33,670	0/0:30,0:30:90.27:0,90,1784	0/0:32,0:32:96.31:0,96,1832	0/0:22,0:22:66.23:0,66,1311	0/0:25,0:25:69.24:0,69,1392	0/0:7,0:7:21.07:0,21,426	0/0:23,0:23:69.22:0,69,1354	0/0:18,0:18:54.19:0,54,1095	0/0:28,0:28:84.27:0,84,1630	0/0:17,0:17:51.17:0,51,1001	0/0:16,0:16:48.16:0,48,948	0/0:25,0:25:75.24:0,75,1486	0/0:28,0:28:84.29:0,84,1682	0/0:23,0:23:69.24:0,69,1379	0/0:13,0:13:36.11:0,36,693	0/0:27,0:27:81.28:0,81,1627	0/0:13,0:13:39.13:0,39,791	0/0:8,0:8:24.08:0,24,487	0/0:36,0:36:99:0,108,2151	0/0:19,0:19:51.17:0,51,1017	0/0:19,0:19:57.20:0,57,1157	0/0:17,0:17:48.15:0,48,936	0/0:10,0:10:30.10:0,30,602
chr10	14812312	.	GGGATGGATGGAT	G	7618.32	PASS	AB=0.990;AC=15;AF=0.268;AN=56;BaseQRankSum=3.205;DP=1015;FS=2.272;HRun=0;HaplotypeScore=350.8306;InbreedingCoeff=0.5029;MQ=56.75;MQ0=8;MQRankSum=-9.074;QD=16.97;ReadPosRankSum=4.403;VQSLOD=2.4072;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:34:99:102,0,837	0/0:6,0:17:32.07:0,32,632	0/0:30,0:22:12.64:0,13,752	0/0:32,0:18:20.09:0,20,689	0/0:20,0:20:48.15:0,48,1999	0/0:23,0:22:57.20:0,57,2672	0/0:30,0:30:66.17:0,66,2558	0/0:21,0:33:57.17:0,57,948	0/0:21,1:74:8.13:0,8,3668	0/0:18,0:51:99:0,129,3418	0/0:9,0:23:24.47:0,24,702	0/1:20,0:68:99:101,0,1228	0/1:15,0:52:29.89:30,0,1235	0/1:20,0:59:99:124,0,620	1/1:12,57:68:90.31:2794,90,0	1/1:14,46:60:78.27:2644,78,0	0/0:19,0:26:48.14:0,48,1468	0/1:19,1:20:99:251,0,149	1/1:4,9:12:25.32:680,25,0	1/1:4,25:28:16.17:321,16,0	1/1:43,2:43:18.22:571,18,0	0/0:9,0:30:23.09:0,23,398	0/0:20,0:18:24.28:0,24,555	0/0:4,0:25:4.36:0,4,32	0/0:8,0:26:12.50:0,12,228	0/0:16,0:45:99:0,111,2949	0/0:8,0:36:54.18:0,54,1776	0/0:13,0:20:60.20:0,60,1660
chr10	14812324	.	T	TG	1208.40	PASS	AB=0.937;AC=8;AF=0.143;AN=56;BaseQRankSum=9.275;DP=1024;FS=0.000;HRun=2;HaplotypeScore=234.2644;InbreedingCoeff=-0.0033;MQ=54.20;MQ0=12;MQRankSum=0.256;QD=4.61;ReadPosRankSum=8.666;VQSLOD=-0.3113;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:47.63:0,48,786	0/0:17,0:17:14.46:0,14,188	0/0:34,0:22:34.08:0,34,552	0/0:35,0:18:16.55:0,17,386	0/0:18,0:18:51.16:0,51,632	0/0:21,0:20:56.39:0,56,676	0/0:28,0:28:84.23:0,84,1015	0/0:32,0:32:79.30:0,79,943	0/0:77,0:77:37.77:0,38,571	0/0:57,0:55:69.37:0,69,993	0/0:27,0:26:22.97:0,23,265	0/0:69,0:69:37.80:0,38,546	0/0:49,0:49:14.47:0,14,300	0/0:56,0:56:35.34:0,35,424	0/1:62,0:61:99:273,0,230	0/1:52,0:52:99:279,0,122	0/0:26,0:24:11.66:0,12,212	0/1:23,3:26:99:195,0,343	0/1:13,0:12:71.47:71,0,112	0/1:27,0:27:60.83:105,0,61	0/1:36,22:55:99:407,0,310	0/0:31,0:30:16.63:0,17,252	0/0:22,0:20:41.36:0,41,462	1/1:23,0:23:1.95:5,2,0	0/0:27,0:27:20.09:0,20,246	0/0:45,0:45:40.94:0,41,695	0/0:34,0:34:7.74:0,8,206	0/0:22,0:21:32.92:0,33,467
chr10	14812599	.	G	GTGGA	6675.06	PASS	AB=0.961;AC=11;AF=0.196;AN=56;BaseQRankSum=9.311;DP=1027;FS=10.754;HRun=0;HaplotypeScore=206.0030;InbreedingCoeff=0.5837;MQ=52.00;MQ0=34;MQRankSum=-3.158;QD=22.86;ReadPosRankSum=-3.389;VQSLOD=3.1082;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:34:37.18:0,37,850	0/0:16,0:16:32.59:0,33,497	0/0:59,0:27:15.03:0,15,198	0/0:69,0:26:11.17:0,11,201	0/0:33,0:33:71.45:0,71,1115	0/0:36,0:36:84.28:0,84,1342	0/1:28,0:28:1.07:1,0,696	0/0:46,0:43:29.10:0,29,540	0/0:42,0:42:52.13:0,52,971	0/0:48,0:46:45.85:0,46,1303	0/0:19,0:18:2.04:0,2,276	0/0:53,0:52:44.45:0,44,1023	0/0:33,0:33:24.68:0,25,526	0/0:34,0:34:30.28:0,30,514	1/1:50,2:52:99:1923,112,0	0/1:49,0:49:5.27:1749,0,5	0/0:32,0:32:51.98:0,52,719	1/1:25,1:26:22.96:721,23,0	0/1:13,2:14:0.36:368,0,0	0/1:33,3:36:5.44:662,0,5	1/1:55,4:55:31.60:1248,32,0	0/0:30,0:29:37.26:0,37,687	0/1:27,0:26:3.89:4,0,551	0/0:38,0:38:41.12:0,41,630	0/0:24,0:24:36.06:0,36,519	0/0:42,0:42:63.25:0,63,1224	0/0:30,0:30:39.01:0,39,604	0/0:15,0:15:18.46:0,18,265
chr10	14812618	.	GATGA	G	1798.12	PASS	AB=0.923;AC=11;AF=0.196;AN=56;BaseQRankSum=10.455;DP=1036;FS=12.235;HRun=0;HaplotypeScore=217.3978;InbreedingCoeff=-0.0206;MQ=47.54;MQ0=89;MQRankSum=-4.079;QD=5.05;ReadPosRankSum=-3.107;VQSLOD=0.6785;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:34,0:32:35.27:35,0,1252	0/1:15,0:15:29.61:30,0,773	0/0:57,0:7:15.05:0,15,309	0/0:65,0:8:18.01:0,18,326	0/0:33,0:33:84.25:0,84,1919	0/0:40,0:40:99:0,111,2308	0/0:31,0:31:77.38:0,77,1451	0/1:50,0:43:5.53:6,0,1380	0/0:44,0:44:77.85:0,78,1601	0/0:61,0:59:89.52:0,90,2250	0/1:22,0:21:74.77:75,0,421	0/0:53,0:52:42.53:0,43,1562	0/0:39,0:39:52.18:0,52,958	0/0:37,0:36:35.33:0,35,814	1/1:38,17:54:64.82:847,65,0	0/1:34,12:46:99:531,0,113	0/0:26,0:27:33.03:0,33,1041	0/1:27,2:29:99:122,0,112	0/1:16,3:12:58.88:59,0,64	0/1:32,5:35:88.38:111,0,88	0/1:39,10:43:40.29:135,0,40	0/0:33,0:32:44.34:0,44,1051	0/0:25,0:24:5.46:0,5,807	0/0:30,0:30:47.94:0,48,975	0/0:22,0:22:39.09:0,39,844	0/0:46,0:45:99:0,104,2128	0/0:23,0:23:39.03:0,39,930	0/0:14,0:14:21.05:0,21,428
chr10	14812627	.	GTGGATGGA	G	3990.40	PASS	AB=1.000;AC=12;AF=0.231;AN=52;BaseQRankSum=2.675;DP=1093;FS=10.294;HRun=0;HaplotypeScore=278.6029;InbreedingCoeff=0.7335;MQ=48.12;MQ0=89;MQRankSum=-4.354;QD=15.59;ReadPosRankSum=0.242;VQSLOD=0.9356;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:36:44.15:0,44,672	0/0:18,0:18:33.32:0,33,415	./.	./.	0/0:31,0:30:45.15:0,45,1665	0/0:37,0:37:81.22:0,81,2681	0/0:35,0:35:71.03:0,71,1786	0/0:55,0:49:57.98:0,58,829	0/0:19,0:45:33.03:0,33,514	0/0:26,0:68:99:0,109,1446	0/0:25,0:24:21.16:0,21,195	0/0:20,0:59:29.75:0,30,433	0/0:15,0:46:33.06:0,33,564	0/0:11,0:40:6.01:0,6,81	1/1:51,4:54:99:1930,100,0	1/1:30,16:46:39:558,39,0	0/1:26,0:26:7.18:7,0,409	0/1:31,0:31:60.72:576,0,61	1/1:17,4:13:12.05:251,12,0	1/1:19,15:32:23.67:310,24,0	1/1:43,0:37:19.02:360,19,0	0/0:15,0:38:31.24:0,31,269	0/0:27,0:26:14.92:0,15,150	0/0:15,0:30:15.03:0,15,243	0/0:10,0:26:9.01:0,9,116	0/0:26,0:51:83.29:0,83,1083	0/0:9,0:23:19.11:0,19,244	0/0:6,0:22:6.02:0,6,138
chr10	14812801	.	T	TAGAA	8329.75	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-10.475;DP=935;FS=0.000;HRun=0;HaplotypeScore=148.0957;InbreedingCoeff=0.9982;MQ=65.08;MQ0=0;MQRankSum=-0.081;QD=43.38;ReadPosRankSum=2.794;VQSLOD=5.4439;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:62.86:0,63,1018	0/0:19,0:19:54.14:0,54,865	0/0:31,0:31:59.04:0,59,880	0/0:38,0:34:56.68:0,57,750	0/0:35,0:35:93.22:0,93,1509	0/0:35,0:35:93.26:0,93,1541	0/0:25,0:25:72.19:0,72,1169	0/0:45,0:45:93.17:0,93,1264	0/0:36,0:36:99:0,102,1682	0/0:51,0:51:99:0,141,2288	0/0:27,0:27:72.21:0,72,1199	0/0:35,0:35:90.26:0,90,1493	0/0:40,0:40:99:0,99,1583	0/0:34,0:34:89.94:0,90,1478	1/1:4,44:49:72.17:1752,72,0	1/1:4,34:40:81.28:2101,81,0	0/0:17,0:16:37.71:0,38,635	1/1:12,11:23:60.07:1259,60,0	1/1:3,6:9:18.03:283,18,0	1/1:1,43:44:99:2214,117,0	1/1:3,22:27:30.06:721,30,0	0/0:41,0:41:99:0,114,1908	0/0:24,0:24:69.13:0,69,1000	0/0:21,0:21:57.06:0,57,881	0/0:47,0:47:99:0,120,1955	0/0:40,0:40:99:0,105,1728	0/0:33,0:33:81.12:0,81,1180	0/0:44,0:44:99:0,132,2094
chr10	14816240	.	CA	C	3888.98	PASS	AB=1.000;AC=27;AF=0.482;AN=56;BaseQRankSum=8.385;DP=595;FS=0.352;HRun=10;HaplotypeScore=96.7092;InbreedingCoeff=0.2829;MQ=66.41;MQ0=4;MQRankSum=-1.404;QD=9.07;ReadPosRankSum=1.190;VQSLOD=2.5938;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,43:48:99:984,114,0	0/1:13,0:13:22.32:22,0,39	0/1:29,0:14:2.80:3,0,153	0/0:14,0:9:11.82:0,12,78	0/0:18,0:18:48.13:0,48,530	0/0:23,1:24:40.13:0,40,670	0/0:23,0:23:51.07:0,51,523	0/1:25,0:25:5.83:6,0,86	0/1:20,0:20:13.81:14,0,57	0/1:27,0:27:28.67:29,0,72	0/0:17,0:17:5.84:0,6,83	1/1:4,20:25:44.78:375,45,0	1/1:6,17:23:44.98:387,45,0	1/1:2,14:17:44.99:388,45,0	0/0:19,0:19:10.22:0,10,87	0/1:18,0:17:29.09:29,0,57	0/1:26,0:26:17.59:18,0,103	0/1:18,0:18:0.77:1,0,98	0/1:20,0:20:18.27:18,0,51	0/0:18,0:18:12.72:0,13,87	0/1:10,0:10:6.91:7,0,28	1/1:2,15:17:38.98:336,39,0	1/1:2,10:12:23.99:208,24,0	1/1:1,22:23:59.98:517,60,0	1/1:3,23:26:62.98:544,63,0	0/1:31,0:31:3.63:4,0,114	0/0:25,0:25:12.68:0,13,141	0/0:8,0:8:10.28:0,10,40
chr10	14818356	.	GAA	G	5379.54	PASS	AC=12;AF=0.222;AN=54;BaseQRankSum=11.907;DP=496;FS=4.833;HRun=2;HaplotypeScore=64.6040;InbreedingCoeff=0.9484;MQ=89.29;MQ0=0;MQRankSum=-1.321;QD=43.74;ReadPosRankSum=2.320;VQSLOD=4.9003;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:63.18:0,63,1188	0/0:6,0:6:18.06:0,18,366	0/0:19,0:19:54.19:0,54,1070	0/0:19,0:19:57.18:0,57,1053	0/0:11,0:11:30.10:0,30,609	0/0:12,0:12:36.11:0,36,696	0/0:31,0:31:93.32:0,93,1872	0/0:26,0:26:63.22:0,63,1276	0/0:14,0:14:42.14:0,42,843	0/0:13,0:13:39.13:0,39,793	./.	0/0:27,0:27:78.27:0,78,1585	0/0:23,0:23:69.24:0,69,1402	0/0:28,0:28:84.29:0,84,1670	1/1:0,20:20:54.18:881,54,0	1/1:1,17:18:1.30:779,1,0	0/0:30,0:30:90.31:0,90,1816	1/1:0,24:24:57.19:930,57,0	1/1:0,17:17:48.16:782,48,0	1/1:0,8:8:21.07:343,21,0	1/1:0,36:36:99:1664,102,0	0/0:8,0:8:24.08:0,24,469	0/0:6,0:6:18.06:0,18,365	0/0:19,0:19:57.20:0,57,1158	0/0:11,0:11:33.11:0,33,669	0/0:14,0:14:42.14:0,42,848	0/0:22,0:22:66.18:0,66,1280	0/0:12,0:12:36.12:0,36,730
chr10	14818904	.	AC	A	9807.54	PASS	AB=1.000;AC=47;AF=0.839;AN=56;BaseQRankSum=3.064;DP=562;FS=38.847;HRun=9;HaplotypeScore=91.6988;InbreedingCoeff=0.8751;MQ=77.60;MQ0=0;MQRankSum=-5.573;QD=20.60;ReadPosRankSum=5.512;VQSLOD=2.9973;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,27:33:75.04:685,75,0	1/1:2,8:10:27.89:242,28,0	0/1:25,0:22:9.71:10,0,259	0/0:27,0:26:50.76:0,51,529	0/0:16,0:16:42.11:0,42,472	0/0:21,0:21:48.13:0,48,542	0/0:19,0:19:42.12:0,42,484	1/1:2,16:18:45.17:425,45,0	1/1:1,15:16:39.02:350,39,0	1/1:2,16:18:48.49:432,48,0	1/1:3,22:25:62.91:551,63,0	1/1:5,15:20:54.02:493,54,0	1/1:0,14:15:38.06:335,38,0	1/1:1,18:19:51.02:466,51,0	1/1:2,20:22:57.02:519,57,0	1/1:0,18:18:48.01:439,48,0	1/1:10,24:34:67.95:617,68,0	1/1:7,22:29:60.03:549,60,0	1/1:7,22:29:68.96:614,69,0	1/1:3,10:13:24.01:219,24,0	1/1:6,22:28:59.69:533,60,0	1/1:5,13:19:53.06:470,53,0	1/1:1,8:9:27.01:247,27,0	1/1:3,20:23:51.03:466,51,0	1/1:2,11:13:38.98:348,39,0	1/1:4,13:17:41.99:374,42,0	1/1:4,13:16:35.88:312,36,0	1/1:2,4:6:13.36:111,13,0
chr10	14818998	.	CTTTG	C	6202.07	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=10.884;DP=528;FS=10.905;HRun=0;HaplotypeScore=91.6767;InbreedingCoeff=0.9969;MQ=67.56;MQ0=0;MQRankSum=-2.268;QD=44.94;ReadPosRankSum=1.485;VQSLOD=4.7479;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,18:25:66.18:1176,66,0	0/0:5,0:5:15.05:0,15,395	0/0:23,0:16:30.39:0,30,517	0/0:19,0:13:29.92:0,30,614	0/0:23,0:23:66.23:0,66,1684	0/0:23,0:23:69.24:0,69,1698	0/0:21,0:21:54.08:0,54,1284	0/0:25,0:25:69.24:0,69,1737	0/0:19,0:19:54.19:0,54,1442	0/0:26,0:26:78.27:0,78,2049	0/0:26,0:26:69.23:0,69,1752	1/1:3,17:20:39.13:734,39,0	1/1:5,7:12:33.11:617,33,0	1/1:1,10:11:30.10:565,30,0	0/0:13,0:13:36.12:0,36,934	0/0:19,0:19:54.19:0,54,1408	0/0:14,0:14:39.13:0,39,990	0/0:28,0:28:75.26:0,75,1911	0/0:22,0:22:63.13:0,63,1414	0/0:13,0:13:36.12:0,36,895	0/0:12,0:12:33.11:0,33,881	1/1:0,20:20:54.10:922,54,0	1/1:0,14:14:42.14:769,42,0	1/1:0,18:18:33.11:626,33,0	1/1:1,17:18:42.14:793,42,0	0/0:18,0:18:54.19:0,54,1360	0/0:24,0:24:69.24:0,69,1787	0/0:17,0:17:48.16:0,48,1280
chr10	14819202	.	G	GA	861.89	PASS	AB=0.728;AC=14;AF=0.250;AN=56;BaseQRankSum=-4.519;DP=411;FS=3.820;HRun=14;HaplotypeScore=60.1141;InbreedingCoeff=0.3214;MQ=73.43;MQ0=3;MQRankSum=-0.409;QD=5.26;ReadPosRankSum=-1.241;VQSLOD=1.8972;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,17:24:3.89:186,4,0	0/0:0,0:5:10.19:0,10,29	0/0:41,0:16:2.54:0,3,12	0/1:30,1:9:9.80:10,0,34	0/0:5,0:6:7.90:0,8,44	0/0:18,0:21:46.24:0,46,280	0/0:14,0:15:27.99:0,28,178	0/0:3,0:14:21.69:0,22,62	0/0:6,0:18:30.05:0,30,108	0/0:1,0:5:8.15:0,8,23	0/0:1,0:8:15.16:0,15,54	0/1:4,16:20:10.24:122,0,10	0/1:2,9:11:7.31:60,0,7	0/1:8,4:13:20.39:142,0,20	0/0:12,0:13:24.84:0,25,146	0/0:17,0:18:36.52:0,37,223	0/0:7,0:19:25.30:0,25,84	0/0:20,1:22:19.84:0,20,228	0/1:14,0:14:4.29:4,0,96	0/0:3,0:3:2.91:0,3,19	0/0:5,0:5:8.38:0,8,47	1/1:6,0:6:5.96:44,6,0	0/1:1,6:8:11.04:66,0,11	1/1:3,13:16:18:158,18,0	1/1:4,16:21:23.15:232,23,0	0/0:6,0:9:2.96:0,3,10	0/0:4,0:14:6.61:0,7,31	0/0:3,0:9:12.19:0,12,35
chr10	14819875	.	C	CA	3046.14	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-10.876;DP=598;FS=2.413;HRun=10;HaplotypeScore=63.3798;InbreedingCoeff=0.9241;MQ=72.45;MQ0=7;MQRankSum=-2.637;QD=20.04;ReadPosRankSum=2.082;VQSLOD=4.7846;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,19:22:48.09:501,48,0	0/0:14,0:14:32.92:0,33,266	0/0:31,0:16:13.74:0,14,79	0/0:28,0:15:20.98:0,21,144	0/0:34,0:34:83.87:0,84,686	0/0:15,0:15:44.95:0,45,369	0/0:19,0:19:44.92:0,45,369	0/0:41,0:40:59.06:0,59,633	0/0:16,1:17:12.95:0,13,312	0/0:24,0:24:44.78:0,45,364	0/0:14,0:14:38.92:0,39,315	1/1:1,12:13:21.05:224,21,0	1/1:5,18:23:20.47:423,20,0	1/1:4,12:16:2.47:231,2,0	0/0:27,0:27:71.84:0,72,584	0/0:16,0:16:41.94:0,42,344	0/0:32,0:32:74.88:0,75,615	0/0:18,0:18:47.94:0,48,394	0/0:19,0:19:38.94:0,39,320	0/0:18,0:18:44.92:0,45,369	0/0:7,0:7:20.96:0,21,169	1/1:3,8:11:2.47:231,2,0	1/1:5,16:21:42.10:446,42,0	1/1:1,19:20:51.13:544,51,0	1/1:4,22:26:60.15:640,60,0	0/0:24,0:24:59.89:0,60,492	0/0:24,0:25:64.96:0,65,523	0/0:23,0:23:68.92:0,69,567
chr10	14822177	.	GCA	G	5203.49	PASS	AB=0.908;AC=23;AF=0.411;AN=56;BaseQRankSum=3.866;DP=738;FS=6.012;HRun=0;HaplotypeScore=108.4898;InbreedingCoeff=0.6402;MQ=71.70;MQ0=3;MQRankSum=-0.579;QD=15.04;ReadPosRankSum=0.072;VQSLOD=4.5378;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:90.10:0,90,1363	1/1:3,7:10:18.05:216,18,0	0/0:37,0:31:46.71:0,47,679	0/0:37,0:27:39.91:0,40,472	0/1:10,1:11:5.88:6,0,392	0/1:19,3:22:59.65:60,0,544	0/1:32,3:35:11.80:12,0,754	1/1:10,14:24:39.12:467,39,0	1/1:5,28:33:72.20:851,72,0	1/1:2,21:24:66.02:758,66,0	1/1:3,13:17:35.94:410,36,0	0/0:28,0:28:48.16:0,48,761	0/1:21,3:24:14.77:15,0,757	0/0:18,1:19:6.16:0,6,588	0/0:11,0:29:57.02:0,57,554	0/0:7,0:19:39.01:0,39,386	1/1:8,35:44:99:1165,99,0	0/0:10,1:30:27:0,27,562	0/0:11,0:18:36.03:0,36,387	0/0:6,0:14:24:0,24,231	0/0:24,0:70:99:0,141,1380	0/0:12,0:12:30.10:0,30,479	0/0:11,0:11:24.08:0,24,384	0/1:50,4:54:8.50:8,0,1783	0/0:24,0:25:46.06:0,46,897	1/1:4,19:23:57.12:647,57,0	1/1:3,14:18:38.95:445,39,0	1/1:1,6:7:12.04:144,12,0
chr10	14822372	.	AC	A	2726.23	PASS	AB=0.918;AC=21;AF=0.375;AN=56;BaseQRankSum=-1.072;DP=442;FS=20.472;HRun=10;HaplotypeScore=57.5142;InbreedingCoeff=0.7527;MQ=77.54;MQ0=0;MQRankSum=1.171;QD=13.43;ReadPosRankSum=3.024;VQSLOD=1.8618;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:17:14.68:0,15,111	1/1:2,4:6:14.96:124,15,0	0/0:14,0:13:24.72:0,25,214	0/0:19,0:18:7.89:0,8,138	0/0:5,0:10:11.46:0,11,61	0/0:5,0:15:14.30:0,14,73	0/1:4,1:15:2.99:3,0,95	1/1:6,15:21:38.96:339,39,0	1/1:2,14:16:38.99:338,39,0	1/1:1,15:16:38.98:338,39,0	1/1:2,12:14:35.99:312,36,0	0/0:16,0:19:21.06:0,21,148	0/0:6,0:19:23.20:0,23,163	0/0:7,0:12:8.82:0,9,68	0/0:14,1:15:10.06:0,10,339	0/0:12,0:12:27.01:0,27,283	1/1:7,15:22:47.98:416,48,0	0/0:18,0:18:22.09:0,22,456	0/1:16,2:18:25.03:25,0,205	0/0:18,2:20:15.87:0,16,373	0/1:20,2:22:6.54:7,0,375	0/0:5,0:9:11.73:0,12,95	0/0:4,0:16:19.89:0,20,100	0/0:9,0:17:17.08:0,17,118	0/0:1,0:7:8.72:0,9,61	1/1:6,12:18:35.94:304,36,0	1/1:3,20:23:59.98:521,60,0	1/1:4,8:12:23.99:208,24,0
chr10	14824937	.	GTCTCTCTCTCTCTCTCTCTCTC	G	246.95	PASS	AB=0.766;AC=6;AF=0.120;AN=50;BaseQRankSum=3.464;DP=654;FS=0.000;HRun=0;HaplotypeScore=293.3394;InbreedingCoeff=0.4421;MQ=70.42;MQ0=38;MQRankSum=-1.623;QD=3.25;ReadPosRankSum=-0.179;VQSLOD=2.0672;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:25:15.05:0,15,620	0/0:11,0:10:14.53:0,15,660	0/0:80,0:31:0.47:0,0,1	0/0:94,0:39:5.87:0,6,26	0/0:11,0:12:6.02:0,6,202	0/0:14,0:15:12.44:0,12,239	0/1:13,0:18:1.48:1,0,339	0/0:38,0:37:31.41:0,31,752	0/0:28,0:28:23.33:0,23,1656	0/0:23,0:22:27.09:0,27,1893	0/0:18,0:18:12.04:0,12,898	0/0:18,0:17:12.03:0,12,465	0/0:15,0:14:8.04:0,8,307	0/0:18,0:16:9.03:0,9,721	0/1:19,6:27:0:0,0,0	1/1:15,0:17:3.48:172,3,0	0/0:19,0:18:31.61:0,32,1914	1/1:11,1:10:3.01:166,3,0	./.	./.	./.	0/0:16,0:16:3.01:0,3,223	0/0:19,0:19:3.01:0,3,50	0/0:18,0:17:15.92:0,16,716	0/0:12,0:12:9.03:0,9,592	0/0:20,0:20:21.07:0,21,1300	0/0:17,0:16:30.10:0,30,1790	0/0:16,0:16:30.04:0,30,994
chr10	14829596	.	TG	T	6702.81	PASS	AB=0.771;AC=47;AF=0.839;AN=56;BaseQRankSum=5.275;DP=555;FS=5.202;HRun=10;HaplotypeScore=74.7932;InbreedingCoeff=0.6213;MQ=71.00;MQ0=1;MQRankSum=-3.681;QD=13.07;ReadPosRankSum=5.331;VQSLOD=4.8065;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,0:16:28.51:84,29,0	1/1:1,10:11:29.99:260,30,0	0/0:13,1:13:4.03:0,4,262	0/0:12,0:12:15.28:0,15,186	0/1:11,3:14:26.67:27,0,228	0/1:17,2:19:7.01:7,0,370	0/0:15,1:16:19.08:0,19,439	1/1:12,19:31:27.91:417,28,0	1/1:3,19:22:47.98:417,48,0	1/1:3,10:14:32.02:266,32,0	1/1:4,4:8:20.99:181,21,0	1/1:2,0:24:34.63:102,35,0	1/1:4,0:30:43.80:128,44,0	1/1:0,0:17:32.59:96,33,0	1/1:6,24:32:70.03:585,70,0	1/1:6,21:27:65.98:570,66,0	1/1:3,20:24:62.01:526,62,0	1/1:3,13:17:38.03:318,38,0	0/1:5,12:17:0.21:227,0,0	1/1:4,13:17:26.55:234,27,0	1/1:4,27:32:83.01:709,83,0	1/1:2,0:16:22.41:65,22,0	1/1:1,0:13:22.41:66,22,0	1/1:4,1:29:43.74:146,44,0	1/1:2,0:22:30.55:89,31,0	1/1:4,20:25:51.02:535,51,0	1/1:6,17:23:50.98:440,51,0	1/1:2,10:12:23.97:208,24,0
chr10	14832759	.	T	TTTG	16785.89	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-16.650;DP=757;FS=9.157;HRun=0;HaplotypeScore=106.5442;InbreedingCoeff=0.9956;MQ=69.07;MQ0=1;MQRankSum=-0.783;QD=40.74;ReadPosRankSum=1.055;VQSLOD=5.9588;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,120,1686	1/1:5,10:16:30.10:612,30,0	0/0:34,0:31:35.27:0,35,485	0/0:23,0:23:31.57:0,32,346	0/0:20,0:20:48.14:0,48,672	0/0:23,0:22:60.20:0,60,865	0/0:29,0:29:60.20:0,60,863	1/1:13,21:36:72.19:1362,72,0	1/1:4,20:25:42.14:857,42,0	1/1:7,22:30:69.21:1303,69,0	1/1:4,9:14:27.02:493,27,0	0/0:23,0:23:54.17:0,54,761	0/0:28,0:28:69.21:0,69,955	0/0:24,0:24:51.16:0,51,717	1/1:4,29:34:75.25:1510,75,0	1/1:7,21:29:57.19:1156,57,0	1/1:6,29:35:35.04:1487,35,0	1/1:8,24:33:48.65:1282,49,0	1/1:8,10:18:30.10:609,30,0	1/1:3,22:25:60.21:1219,60,0	1/1:13,39:52:99:2202,108,0	0/0:19,0:19:51.11:0,51,678	0/0:28,0:28:66.21:0,66,935	0/0:30,0:30:78.21:0,78,1082	0/0:19,0:19:39.13:0,39,562	1/1:3,21:24:66.21:1286,66,0	1/1:8,19:27:12.91:978,13,0	1/1:5,9:14:21.07:429,21,0
chr10	14835499	.	CGTGTGT	C	8202.01	PASS	AB=0.682;AC=41;AF=0.732;AN=56;BaseQRankSum=7.122;DP=782;FS=15.781;HRun=0;HaplotypeScore=257.5498;InbreedingCoeff=0.5234;MQ=53.54;MQ0=16;MQRankSum=-6.697;QD=12.60;ReadPosRankSum=2.275;VQSLOD=2.6432;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:19,22:44:45.24:60,0,45	1/1:3,9:13:12.04:230,12,0	0/0:65,0:32:21.54:0,22,462	0/1:39,0:23:11.34:11,0,408	0/0:17,0:19:36.11:0,36,929	0/0:17,0:20:42.14:0,42,1224	0/0:22,0:24:34.34:0,34,992	0/1:13,15:29:99:658,0,187	1/1:10,23:36:23.88:459,24,0	1/1:15,18:36:63.20:1204,63,0	0/1:9,12:22:0:0,0,0	1/1:9,17:29:21.05:350,21,0	1/1:10,12:29:37:603,37,0	1/1:9,26:35:27.09:563,27,0	1/1:13,21:35:11.91:229,12,0	1/1:13,20:34:34.20:667,34,0	1/1:12,7:19:11.61:249,12,0	1/1:8,4:12:10.98:248,11,0	1/1:4,9:13:27.07:520,27,0	1/1:6,21:27:2.86:19,3,0	1/1:26,10:37:5.06:49,5,0	0/1:10,15:27:0:0,0,0	0/1:7,15:22:0.06:0,0,0	0/1:13,12:27:0:0,0,0	1/1:6,10:17:3.01:63,3,0	1/1:14,20:35:63.18:1181,63,0	1/1:6,6:12:18.04:337,18,0	1/1:11,11:22:24.08:501,24,0
chr10	14835877	.	C	CTG	29601.10	PASS	AB=0.568;AC=42;AF=0.750;AN=56;BaseQRankSum=-2.802;DP=1328;FS=17.134;HRun=0;HaplotypeScore=191.6275;InbreedingCoeff=0.6280;MQ=63.22;MQ0=24;MQRankSum=4.063;QD=27.74;ReadPosRankSum=7.937;VQSLOD=4.3943;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,68:74:9.35:2290,9,0	1/1:1,13:14:30.10:498,30,0	0/0:69,0:22:38.12:0,38,374	0/0:89,0:45:24.13:0,24,395	0/0:29,0:29:81.18:0,81,954	0/0:19,0:18:47.93:0,48,561	0/0:52,0:53:99:0,123,1457	1/1:17,21:38:54.13:777,54,0	1/1:3,37:40:75.26:1244,75,0	1/1:10,45:55:40.18:1993,40,0	0/1:8,19:28:32.82:548,0,33	0/1:12,44:56:7.75:1488,0,8	0/1:9,33:43:7.01:1298,0,7	1/1:11,48:60:49.49:1349,49,0	1/1:9,44:53:37.42:1623,37,0	1/1:9,35:44:40.44:1208,40,0	1/1:10,37:46:85.77:1342,86,0	1/1:10,33:43:69.07:1268,69,0	1/1:8,16:21:13.28:689,13,0	1/1:2,27:29:42.14:698,42,0	0/1:39,118:155:99:3729,0,102	1/1:6,30:36:60.21:996,60,0	1/1:8,22:30:51.17:846,51,0	1/1:9,60:69:85.61:1954,86,0	1/1:5,17:23:24.08:399,24,0	1/1:13,48:61:99:2076,106,0	1/1:6,20:25:14.56:760,15,0	1/1:5,11:16:33.11:528,33,0
chr10	14836254	.	TG	T	12706.16	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=8.467;DP=636;FS=3.733;HRun=8;HaplotypeScore=100.4764;InbreedingCoeff=0.9977;MQ=87.72;MQ0=0;MQRankSum=-7.553;QD=24.53;ReadPosRankSum=5.999;VQSLOD=4.6132;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,31:31:81.13:782,81,0	1/1:0,12:12:36.06:348,36,0	0/0:21,0:21:47.12:0,47,519	0/0:28,0:28:51.08:0,51,654	0/0:24,0:24:57.17:0,57,686	0/0:23,1:24:34.43:0,34,685	0/0:21,0:21:57.17:0,57,677	1/1:2,25:27:72.11:695,72,0	1/1:0,27:27:77.96:753,78,0	1/1:4,19:23:54.08:521,54,0	1/1:2,9:11:27.02:254,27,0	1/1:4,32:36:96.15:927,96,0	1/1:2,24:26:66.10:637,66,0	1/1:3,25:28:66.10:637,66,0	1/1:0,26:26:72.12:695,72,0	1/1:1,24:25:69.11:666,69,0	1/1:4,28:32:69.11:667,69,0	1/1:0,11:11:33.05:319,33,0	1/1:2,19:21:54.07:514,54,0	1/1:3,26:30:65.12:612,65,0	1/1:1,23:24:66.11:637,66,0	1/1:5,18:23:54.08:521,54,0	1/1:2,13:15:36.05:348,36,0	1/1:3,22:25:57.05:550,57,0	1/1:1,16:17:42.07:405,42,0	1/1:3,24:27:72.11:695,72,0	1/1:1,14:15:36.06:348,36,0	1/1:0,6:6:18.03:174,18,0
chr10	14837832	.	T	TCC	16991.99	PASS	AB=0.663;AC=23;AF=0.411;AN=56;BaseQRankSum=-6.785;DP=900;FS=13.056;HRun=1;HaplotypeScore=190.5378;InbreedingCoeff=-0.6970;MQ=66.70;MQ0=2;MQRankSum=-1.300;QD=21.95;ReadPosRankSum=1.171;VQSLOD=1.7204;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:22,28:51:99:1098,0,676	0/1:3,11:14:61.59:519,0,62	0/0:27,0:27:77.26:0,77,994	0/0:27,0:26:58.52:0,59,914	0/0:18,0:18:54.17:0,54,856	0/0:13,0:13:36.12:0,36,581	0/0:41,0:41:99:0,120,1886	0/1:18,21:40:99:1073,0,749	0/1:11,19:30:99:719,0,382	0/1:15,10:26:99:511,0,542	0/1:2,9:11:64.36:512,0,64	0/1:20,12:34:99:629,0,832	0/1:14,15:29:99:708,0,577	0/1:20,15:36:99:689,0,874	0/1:30,26:58:99:1119,0,1236	0/1:17,15:33:99:698,0,737	0/1:28,14:42:99:551,0,1119	0/1:17,12:29:99:654,0,560	0/1:13,17:29:99:826,0,488	0/1:9,12:21:99:449,0,291	0/1:30,40:71:99:1498,0,788	0/1:24,10:34:99:555,0,956	0/1:6,14:20:99:555,0,229	0/1:16,22:39:99:1002,0,630	0/1:19,11:31:99:473,0,625	0/1:24,14:38:99:673,0,821	0/1:14,24:38:99:1219,0,571	0/1:9,5:14:99:265,0,352
chr10	14838457	.	C	CT	3883.46	PASS	AB=0.618;AC=29;AF=0.518;AN=56;BaseQRankSum=-1.570;DP=546;FS=7.759;HRun=10;HaplotypeScore=122.1827;InbreedingCoeff=0.8712;MQ=68.81;MQ0=0;MQRankSum=-2.015;QD=14.49;ReadPosRankSum=-0.054;VQSLOD=2.7778;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:83.76:0,84,680	1/1:1,7:9:17.56:151,18,0	0/0:18,0:18:12.59:0,13,163	0/0:12,0:12:13.18:0,13,122	0/0:27,1:28:21.92:0,22,384	0/0:13,0:13:34.99:0,35,277	0/0:25,0:26:55.80:0,56,433	1/1:5,18:24:44.93:454,45,0	1/1:1,16:17:33.08:351,33,0	0/1:8,13:21:34.84:280,0,35	1/1:4,4:8:12.03:126,12,0	0/0:21,0:22:53.61:0,54,427	0/0:15,0:17:31.97:0,32,252	0/0:27,0:29:69.95:0,70,549	1/1:5,2:27:51.01:301,51,0	1/1:11,2:26:40.25:240,40,0	1/1:2,15:17:40.34:418,40,0	1/1:3,0:13:28.54:143,29,0	1/1:10,1:21:1.51:106,2,0	1/1:3,1:11:11.70:92,12,0	1/1:2,0:17:28.69:159,29,0	0/0:17,0:18:34.92:0,35,272	0/0:15,0:15:29.95:0,30,246	0/0:26,0:27:49.96:0,50,400	0/0:15,1:18:10.63:0,11,261	1/1:5,21:26:54.06:547,54,0	1/1:3,15:19:38.97:398,39,0	1/1:4,7:11:12:116,12,0
chr10	14838594	.	A	AGAG	406.10	PASS	AB=1.000;AC=21;AF=0.583;AN=36;BaseQRankSum=-0.270;DP=199;FS=0.000;HRun=0;HaplotypeScore=52.2629;InbreedingCoeff=0.4615;MQ=37.75;MQ0=0;MQRankSum=-1.351;QD=4.46;ReadPosRankSum=0.894;VQSLOD=1.5527;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/1:8,0:6:0:0,0,0	0/0:4,0:2:2.85:0,3,42	0/0:4,0:1:9.03:0,9,129	0/0:14,0:14:6.01:0,6,73	./.	1/1:11,0:11:1.25:3,1,0	1/1:9,0:9:1.55:4,2,0	./.	./.	1/1:9,2:11:9.03:164,9,0	1/1:4,0:4:2.49:5,2,0	./.	1/1:7,0:7:1.25:3,1,0	1/1:12,0:12:2.49:5,2,0	./.	1/1:2,1:3:3.01:61,3,0	./.	1/1:2,0:2:3:29,3,0	1/1:10,3:12:9.03:182,9,0	./.	0/0:14,0:14:18:0,18,215	0/0:9,0:8:0.89:0,1,2	0/0:6,0:6:0:0,0,0	0/0:12,0:11:3.01:0,3,43	1/1:10,1:11:3.01:61,3,0	./.	./.
chr10	14843744	.	TC	T	1442.23	PASS	AB=0.932;AC=23;AF=0.411;AN=56;BaseQRankSum=8.427;DP=500;FS=1.401;HRun=1;HaplotypeScore=106.1666;InbreedingCoeff=-0.0234;MQ=52.04;MQ0=5;MQRankSum=-8.565;QD=4.71;ReadPosRankSum=-2.391;VQSLOD=-0.5242;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:24,8:32:7.39:357,7,0	0/0:8,0:8:9.01:0,9,98	0/0:26,0:15:39.95:0,40,524	0/0:19,0:11:19.05:0,19,236	0/0:30,0:30:84.18:0,84,1229	0/0:20,0:20:53.10:0,53,724	0/0:19,0:19:48.16:0,48,718	0/1:22,0:21:80.52:81,0,200	0/1:8,0:8:6.56:7,0,60	0/1:26,0:24:47.33:47,0,250	0/0:19,0:19:17.53:0,18,126	1/1:9,2:14:16.62:131,17,0	0/1:9,1:11:52.33:83,0,52	1/1:9,1:13:0.23:99,0,0	0/1:15,0:15:23.98:24,0,198	0/0:16,0:13:16.37:0,16,144	0/0:13,0:11:3.10:0,3,138	0/1:12,1:12:47.60:48,0,176	0/1:23,2:24:99:104,0,252	0/0:24,0:24:8.99:0,9,132	0/1:10,0:10:28.43:43,0,28	0/1:11,6:19:11.55:154,0,12	1/1:11,3:15:8.13:150,8,0	1/1:13,4:15:15.04:117,15,0	0/1:12,2:17:6.66:43,0,7	0/1:23,1:24:93.31:93,0,304	0/1:13,0:13:6.10:6,0,112	0/1:10,0:10:29.12:29,0,58
chr10	14843747	.	TTCTTTTC	T	5642.04	PASS	AB=0.996;AC=32;AF=0.571;AN=56;BaseQRankSum=2.611;DP=527;FS=13.700;HRun=0;HaplotypeScore=142.8133;InbreedingCoeff=-0.0632;MQ=47.54;MQ0=7;MQRankSum=-1.192;QD=13.69;ReadPosRankSum=-4.149;VQSLOD=2.0567;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:35,2:35:70.34:1062,70,0	0/1:10,0:10:18.06:18,0,18	0/0:25,0:13:22.26:0,22,598	0/0:18,0:10:6.48:0,6,247	0/0:32,0:32:90.28:0,90,2622	0/0:19,0:19:45.45:0,45,1375	0/0:21,0:21:57.13:0,57,1362	1/1:27,0:23:5.80:176,6,0	1/1:9,0:7:8.52:110,9,0	0/1:30,0:27:64.74:394,0,65	0/1:19,0:19:33.24:99,0,33	1/1:14,1:15:25.54:451,26,0	1/1:12,0:12:5.08:324,5,0	1/1:12,0:12:20.72:325,21,0	0/1:15,0:14:99:123,0,165	0/1:12,0:9:12.06:12,0,63	0/1:16,0:12:42.21:151,0,42	0/1:14,0:12:74.57:75,0,138	0/1:29,0:28:99:128,0,106	0/1:22,0:22:28.99:29,0,100	0/1:8,0:8:13.06:35,0,13	1/1:16,3:19:13.61:707,14,0	1/1:15,0:15:28.29:495,28,0	0/1:16,1:15:13.94:278,0,14	1/1:18,1:18:25.67:285,26,0	0/1:27,0:24:82.67:163,0,83	0/1:15,0:12:57.23:90,0,57	0/1:13,0:13:50.13:111,0,50
chr10	14843748	.	TC	T	3627.35	PASS	AB=0.887;AC=44;AF=0.786;AN=56;BaseQRankSum=8.126;DP=527;FS=5.603;HRun=1;HaplotypeScore=105.8285;InbreedingCoeff=0.6409;MQ=47.34;MQ0=7;MQRankSum=-4.920;QD=8.87;ReadPosRankSum=-3.498;VQSLOD=-0.2255;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:31,1:35:50.84:374,51,0	1/1:10,0:10:4.68:30,5,0	0/0:25,0:13:28.30:0,28,415	0/0:18,0:10:4.08:0,4,172	0/0:32,0:32:87.12:0,87,1224	0/0:20,0:20:42.86:0,43,706	0/0:23,0:23:54.04:0,54,715	1/1:11,16:23:40.53:290,41,0	1/1:9,0:7:13.29:96,13,0	1/1:30,0:27:42.43:385,42,0	1/1:19,0:19:10.05:57,10,0	1/1:13,1:15:12.03:138,12,0	0/1:11,0:12:15.13:96,0,15	1/1:11,0:12:11.47:83,11,0	1/1:15,0:14:6.79:126,7,0	1/1:11,0:8:5.81:31,6,0	1/1:16,0:12:17.36:160,17,0	1/1:12,2:12:27.81:213,28,0	1/1:25,2:26:52.72:397,53,0	1/1:22,0:22:4.92:53,5,0	1/1:8,0:8:15.95:99,16,0	1/1:16,1:20:9.04:148,9,0	1/1:12,0:15:24.64:145,25,0	0/1:14,0:15:11.25:64,0,11	1/1:9,10:18:21.09:127,21,0	1/1:27,0:24:39.01:265,39,0	1/1:14,0:11:9.72:93,10,0	1/1:13,0:13:23.13:158,23,0
chr10	14843753	.	TC	T	4163.55	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=9.334;DP=547;FS=5.946;HRun=1;HaplotypeScore=107.1114;InbreedingCoeff=0.8609;MQ=44.52;MQ0=14;MQRankSum=-7.988;QD=9.64;ReadPosRankSum=-2.331;VQSLOD=0.4796;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:38,3:39:82.28:539,82,0	1/1:9,0:9:3.17:9,3,0	0/0:22,0:11:29.67:0,30,256	0/0:17,0:9:5.78:0,6,109	0/0:32,0:32:83.63:0,84,855	0/0:20,0:20:39.06:0,39,469	0/0:24,0:24:38.52:0,39,486	1/1:26,0:22:38.76:239,39,0	1/1:10,0:8:13.72:99,14,0	1/1:31,0:28:53.07:427,53,0	1/1:18,0:18:7.42:40,7,0	1/1:17,3:20:31.03:203,31,0	1/1:11,1:11:15.40:135,15,0	1/1:17,2:18:22.56:160,23,0	1/1:17,0:15:19.97:148,20,0	1/1:11,0:8:6.96:36,7,0	1/1:13,0:9:14.25:111,14,0	1/1:14,0:11:25.88:159,26,0	1/1:27,0:25:55.66:375,56,0	1/1:21,0:21:7.39:48,7,0	1/1:8,0:8:13.29:75,13,0	1/1:20,2:22:45.95:298,46,0	1/1:15,1:16:30.31:215,30,0	1/1:21,1:18:12.24:113,12,0	1/1:14,7:20:30.97:202,31,0	1/1:26,0:22:40.40:259,40,0	1/1:15,0:12:18.73:111,19,0	1/1:13,0:13:25.01:163,25,0
chr10	14845492	.	GCGAACTGGAA	G	2836.02	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=8.568;DP=869;FS=0.702;HRun=0;HaplotypeScore=252.8672;InbreedingCoeff=0.9995;MQ=76.06;MQ0=0;MQRankSum=-9.030;QD=83.41;ReadPosRankSum=1.140;VQSLOD=3.3705;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:62,0:62:99:0,184,9294	0/0:10,0:10:30.10:0,30,1581	0/0:30,0:30:75.26:0,75,3196	0/0:24,0:24:60.11:0,60,2581	0/0:21,0:21:63.22:0,63,3272	0/0:20,0:20:57.20:0,57,2941	0/0:36,0:36:99:0,102,5098	0/0:41,0:41:99:0,120,6102	0/0:38,0:38:99:0,114,5941	0/0:49,0:49:99:0,144,7020	0/0:17,0:17:51.13:0,51,2566	0/0:38,0:38:99:0,108,5689	0/0:24,0:24:72.25:0,72,3773	0/0:42,0:42:99:0,126,6687	1/1:2,32:34:87.30:2931,87,0	0/0:37,0:37:99:0,108,5663	0/0:25,0:25:69.24:0,69,3553	0/0:16,0:16:48.16:0,48,2506	0/0:35,0:35:99:0,102,5037	0/0:29,0:29:87.30:0,87,4399	0/0:44,0:44:99:0,129,6638	0/0:28,0:28:81.28:0,81,4251	0/0:20,0:20:54.14:0,54,2703	0/0:38,0:38:99:0,111,5874	0/0:32,0:32:96.33:0,96,4771	0/0:35,0:35:99:0,102,5364	0/0:26,0:26:78.27:0,78,3945	0/0:18,0:18:51.18:0,51,2644
chr10	14847064	.	TA	T	2515.77	PASS	AB=0.935;AC=15;AF=0.268;AN=56;BaseQRankSum=10.919;DP=611;FS=0.365;HRun=11;HaplotypeScore=63.9523;InbreedingCoeff=0.7091;MQ=78.89;MQ0=0;MQRankSum=-0.566;QD=12.52;ReadPosRankSum=-0.247;VQSLOD=3.3059;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:81.19:0,81,856	0/0:10,0:10:27.05:0,27,280	0/1:13,0:13:2.65:3,0,131	0/1:20,2:22:53.31:53,0,225	0/0:30,1:32:49.59:0,50,745	0/0:35,1:36:59.55:0,60,826	0/0:23,1:24:41.51:0,42,640	0/0:34,2:36:28.91:0,29,713	0/0:14,1:16:14.53:0,15,334	0/0:26,2:28:17.61:0,18,542	0/0:11,0:11:2.79:0,3,196	0/0:17,2:19:4.83:0,5,453	0/0:16,0:17:35.96:0,36,366	0/0:16,1:17:11.45:0,11,327	1/1:6,33:39:80.88:665,81,0	1/1:2,20:23:55.92:443,56,0	0/0:19,0:19:51.11:0,51,535	1/1:1,19:24:62.08:467,62,0	1/1:4,3:8:19.60:137,20,0	1/1:8,25:33:65.87:542,66,0	1/1:5,15:23:51.05:387,51,0	0/0:14,1:18:21.05:0,21,379	0/0:17,0:17:45.05:0,45,465	0/0:18,0:18:36.08:0,36,377	0/0:20,0:20:48.56:0,49,488	0/1:14,2:16:7.18:7,0,342	0/0:27,0:27:72.17:0,72,761	0/0:12,0:12:33.03:0,33,338
chr10	14847346	.	GC	G	5528.22	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=11.342;DP=679;FS=4.776;HRun=1;HaplotypeScore=66.3024;InbreedingCoeff=0.9987;MQ=70.69;MQ0=0;MQRankSum=-2.456;QD=38.13;ReadPosRankSum=2.932;VQSLOD=5.5967;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:58:99:0,175,2749	0/0:8,0:8:24.08:0,24,384	0/0:12,1:13:36.08:0,36,568	0/0:15,0:15:34.89:0,35,584	0/0:17,0:17:51.17:0,51,811	0/0:25,0:25:75.26:0,75,1188	0/0:30,0:30:87.29:0,87,1387	0/0:22,0:22:63.21:0,63,1006	0/0:26,0:26:78.27:0,78,1244	0/0:31,0:31:87.28:0,87,1364	0/0:15,0:15:45.15:0,45,710	0/0:33,0:33:99:0,99,1554	0/0:25,0:25:72.09:0,72,1092	0/0:24,0:24:69.24:0,69,1103	1/1:0,29:29:78.26:1090,78,0	1/1:1,31:32:39.34:1127,39,0	0/0:35,0:35:99:0,105,1669	1/1:0,18:18:48.16:671,48,0	1/1:0,14:14:42.14:586,42,0	1/1:0,28:28:81.27:1131,81,0	1/1:0,24:24:66.22:923,66,0	0/0:16,0:16:48.15:0,48,729	0/0:17,0:17:51.17:0,51,801	0/0:47,0:47:99:0,141,2243	0/0:13,0:13:36.12:0,36,566	0/0:19,0:19:57.19:0,57,911	0/0:38,0:38:99:0,111,1743	0/0:7,0:7:21.07:0,21,332
chr10	14847748	.	G	GTA	9298.36	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-16.485;DP=794;FS=0.316;HRun=0;HaplotypeScore=87.6673;InbreedingCoeff=0.9937;MQ=86.49;MQ0=0;MQRankSum=-6.126;QD=44.49;ReadPosRankSum=-1.344;VQSLOD=5.8081;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:63,0:63:99:0,160,2203	1/1:0,5:5:15.05:269,15,0	0/0:29,0:29:74.45:0,74,990	0/0:28,0:27:56.78:0,57,763	0/0:15,0:15:45.15:0,45,627	0/0:22,0:22:63.21:0,63,881	0/0:37,0:37:99:0,111,1478	1/1:3,29:33:93.29:1551,93,0	1/1:2,34:36:87.30:1565,87,0	1/1:2,27:31:81.26:1428,81,0	1/1:1,6:8:18.06:324,18,0	0/0:35,0:35:96.31:0,96,1325	0/0:46,0:46:99:0,129,1784	0/0:27,0:27:81.23:0,81,1112	0/0:40,0:40:99:0,114,1593	0/0:37,1:38:42.27:0,42,1231	1/1:3,23:26:60.21:1080,60,0	0/0:23,0:23:63.19:0,63,863	0/0:19,0:19:54.17:0,54,740	0/0:16,0:16:45.15:0,45,629	0/0:58,0:58:99:0,169,2352	0/0:17,0:17:48.16:0,48,672	0/0:13,0:13:30.08:0,30,401	0/0:41,0:41:99:0,108,1493	0/0:18,0:17:45.15:0,45,629	1/1:2,28:31:87.28:1518,87,0	1/1:1,29:31:72.25:1293,72,0	1/1:1,7:8:15.05:270,15,0
chr10	14848156	.	G	GA	281.99	PASS	AC=18;AF=0.818;AN=22;BaseQRankSum=-2.122;DP=67;FS=0.000;HRun=0;HaplotypeScore=12.1379;InbreedingCoeff=0.2905;MQ=56.10;MQ0=44;MQRankSum=-2.971;QD=9.40;ReadPosRankSum=1.273;VQSLOD=3.1635;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:13,0:3:8.75:0,9,67	0/0:11,0:1:2.80:0,3,13	./.	./.	./.	./.	1/1:2,2:3:8.52:92,9,0	./.	./.	./.	./.	1/1:1,1:2:4.26:42,4,0	1/1:0,2:2:3.45:22,3,0	1/1:0,1:1:2.92:17,3,0	1/1:4,1:1:3.01:48,3,0	./.	1/1:1,1:1:3.01:46,3,0	./.	1/1:4,2:2:2.56:20,3,0	./.	./.	1/1:3,3:3:3.01:39,3,0	./.	1/1:1,1:1:3.01:48,3,0	./.	./.
chr10	14848350	.	AGC	A	2162.44	PASS	AB=1.000;AC=41;AF=0.732;AN=56;BaseQRankSum=-2.867;DP=332;FS=4.415;HRun=0;HaplotypeScore=67.2340;InbreedingCoeff=0.4257;MQ=71.81;MQ0=10;MQRankSum=-0.420;QD=10.50;ReadPosRankSum=-1.566;VQSLOD=2.8951;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,0:7:11.98:99,12,0	1/1:1,0:1:3:25,3,0	0/0:39,0:15:22.79:0,23,215	0/0:57,0:20:9.95:0,10,221	0/0:12,0:12:23.95:0,24,216	0/0:7,0:6:17.95:0,18,143	0/0:11,0:11:23.97:0,24,219	1/1:17,0:15:1.03:260,1,0	1/1:14,0:14:18.06:136,18,0	0/1:11,0:11:25.75:120,0,26	1/1:12,0:11:17.98:150,18,0	1/1:12,0:12:14.81:111,15,0	0/1:8,0:8:5.85:62,0,6	1/1:11,0:11:12.04:94,12,0	1/1:4,0:4:3:26,3,0	0/1:9,0:9:2.53:79,0,3	1/1:5,0:5:11.95:94,12,0	1/1:5,0:5:10.53:77,11,0	1/1:2,6:7:18.42:145,18,0	1/1:4,4:8:5.76:52,6,0	1/1:5,0:5:5.99:50,6,0	1/1:10,0:10:17.93:142,18,0	0/1:12,0:11:3.08:83,0,3	1/1:5,0:5:5.99:49,6,0	1/1:13,0:12:23.90:203,24,0	0/1:12,0:12:44.38:100,0,44	1/1:7,0:7:5.34:29,5,0	1/1:10,0:10:7.82:151,8,0
chr10	14848440	.	T	TTTCC	3736.70	PASS	AB=0.787;AC=26;AF=0.500;AN=52;BaseQRankSum=-1.102;DP=490;FS=2.187;HRun=0;HaplotypeScore=91.0639;InbreedingCoeff=0.7641;MQ=62.34;MQ0=17;MQRankSum=-1.569;QD=14.15;ReadPosRankSum=-2.925;VQSLOD=2.4573;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:16,15:34:21.57:761,22,0	0/0:5,0:5:12.04:0,12,182	./.	./.	0/0:10,0:10:15.04:0,15,211	0/0:9,0:9:18.05:0,18,259	0/0:25,0:25:13:0,13,409	0/0:11,0:10:9:0,9,81	0/0:15,0:25:11.33:0,11,94	0/0:16,0:16:24.07:0,24,341	0/0:11,0:11:18.02:0,18,253	1/1:10,10:20:12.04:283,12,0	1/1:11,6:17:9.03:201,9,0	1/1:7,9:17:15.01:287,15,0	1/1:10,0:21:12.04:195,12,0	0/1:19,0:20:6.94:211,0,7	0/0:19,0:19:39.07:0,39,520	1/1:17,0:16:11.85:89,12,0	1/1:10,0:11:9:101,9,0	1/1:6,1:10:9.50:164,10,0	1/1:23,10:33:11.32:155,11,0	0/1:5,8:13:8.90:298,0,9	1/1:2,6:8:6.02:141,6,0	1/1:9,13:21:19.83:675,20,0	1/1:17,0:17:8.81:177,9,0	0/0:14,0:14:18.05:0,18,260	0/0:15,0:14:17.99:0,18,238	0/0:14,0:14:15.03:0,15,198
chr10	14850032	.	AGTAGAGAAG	A	14155.68	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=17.219;DP=666;FS=7.191;HRun=0;HaplotypeScore=189.8920;InbreedingCoeff=0.9991;MQ=85.71;MQ0=0;MQRankSum=-18.154;QD=70.43;ReadPosRankSum=2.795;VQSLOD=4.0683;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,29:33:69.24:2152,69,0	0/0:7,0:7:21.07:0,21,1043	0/0:31,0:31:83.47:0,83,3824	0/0:21,0:21:60.20:0,60,2493	0/0:23,0:23:66.21:0,66,3056	0/0:22,0:22:66.21:0,66,3102	0/0:27,0:27:78.25:0,78,3457	0/0:40,0:40:99:0,120,5558	0/0:16,0:16:48.16:0,48,2258	0/0:16,0:16:48.16:0,48,2297	0/0:10,0:10:30.10:0,30,1352	1/1:0,21:21:57.20:1800,57,0	1/1:1,31:32:84.29:2609,84,0	1/1:1,25:26:63.22:1966,63,0	0/0:28,0:28:78.27:0,78,3776	0/0:20,0:20:57.20:0,57,2728	0/0:31,0:31:93.32:0,93,4422	0/0:29,0:29:87.30:0,87,4012	0/0:22,0:22:63.22:0,63,2836	0/0:17,0:17:48.16:0,48,2363	0/0:37,0:37:99:0,108,5110	1/1:1,19:20:42.14:1325,42,0	1/1:1,20:21:54.19:1664,54,0	1/1:7,17:23:29.63:935,30,0	1/1:1,23:24:54.19:1706,54,0	0/0:22,0:22:66.23:0,66,3172	0/0:22,0:22:66.12:0,66,2455	0/0:24,0:24:72.21:0,72,3291
chr10	14854269	.	AGTGTGAGG	A	19556.33	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=17.830;DP=644;FS=11.715;HRun=0;HaplotypeScore=172.2238;InbreedingCoeff=0.9807;MQ=72.17;MQ0=0;MQRankSum=-18.591;QD=59.99;ReadPosRankSum=0.944;VQSLOD=4.3751;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,32:36:78.27:2254,78,0	0/0:10,0:10:30.10:0,30,1359	0/0:15,0:15:42.14:0,42,1826	0/0:16,0:16:33.93:0,34,1667	0/0:29,0:29:84.29:0,84,3714	0/0:17,0:17:51.18:0,51,2260	0/0:34,0:34:99:0,99,4317	0/0:19,0:19:54.19:0,54,2445	0/0:30,0:30:90.31:0,90,3790	0/0:29,0:29:87.30:0,87,3801	0/0:14,0:14:42.14:0,42,1884	1/1:2,19:21:51.18:1492,51,0	1/1:2,21:23:60.21:1733,60,0	1/1:0,30:30:84.29:2416,84,0	1/1:2,32:34:81.28:2369,81,0	1/1:2,28:30:69.24:2018,69,0	0/0:39,0:39:99:0,117,4907	1/1:6,24:30:48.16:1405,48,0	1/1:2,14:16:42.14:1096,42,0	1/1:1,4:5:6.02:126,6,0	1/1:10,18:28:33.11:939,33,0	1/1:4,19:23:45.15:1316,45,0	1/1:1,8:9:15.05:417,15,0	1/1:4,14:18:21.07:593,21,0	1/1:1,22:23:48.16:1383,48,0	0/0:35,0:35:99:0,105,4595	0/0:26,0:26:78.27:0,78,3402	0/0:5,0:5:15.05:0,15,540
chr10	14854891	.	CTGCGGGTTCTCTGCTGCAGTTTACAGTCCCT	C	16532.97	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=12.113;DP=440;FS=10.650;HRun=0;HaplotypeScore=312.3607;InbreedingCoeff=0.9087;MQ=82.98;MQ0=0;MQRankSum=-10.194;QD=97.25;ReadPosRankSum=4.939;VQSLOD=2.6298;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,105,11627	1/1:0,11:11:18.06:1508,18,0	0/0:16,0:16:45.12:0,45,1924	0/0:13,0:13:36.10:0,36,1883	0/0:19,0:19:48.16:0,48,5022	0/0:17,0:17:48.16:0,48,5798	0/0:33,0:33:99:0,99,12409	1/1:6,0:6:17.77:142,18,0	1/1:0,12:12:24.08:2009,24,0	1/1:0,17:17:33.47:1475,33,0	1/1:0,8:8:9.03:558,9,0	0/0:21,0:21:63.22:0,63,8197	0/0:18,0:18:54.17:0,54,6494	0/0:19,0:19:57.18:0,57,6037	1/1:0,16:16:21.07:1759,21,0	1/1:0,12:12:27.09:2260,27,0	1/1:0,14:14:18.06:1508,18,0	1/1:0,7:7:6.02:502,6,0	1/1:0,15:15:44.34:1760,44,0	1/1:3,0:3:3:26,3,0	1/1:0,22:22:3.01:251,3,0	0/0:18,0:18:51.17:0,51,5494	0/0:15,0:15:39.12:0,39,4060	0/0:30,0:30:90.29:0,90,11471	0/0:15,0:15:39.12:0,39,4640	1/1:0,16:16:21.05:1018,21,0	1/1:0,9:9:15.05:1255,15,0	1/1:0,2:2:6.02:503,6,0
chr10	14855392	.	GCC	G	8033.58	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=0.712;DP=447;FS=21.465;HRun=10;HaplotypeScore=63.8739;InbreedingCoeff=0.9791;MQ=73.86;MQ0=3;MQRankSum=-0.115;QD=25.58;ReadPosRankSum=3.464;VQSLOD=2.8629;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,32:35:55.69:842,56,0	1/1:2,8:10:21.04:234,21,0	0/0:14,0:14:32.84:0,33,342	0/0:12,0:13:23.94:0,24,262	0/0:1,0:12:27.92:0,28,106	0/0:11,0:11:21.03:0,21,306	0/0:12,0:12:27.09:0,27,425	1/1:6,13:19:36.04:380,36,0	1/1:1,17:18:42.11:468,42,0	1/1:2,14:15:39.10:435,39,0	1/1:0,16:16:45.12:502,45,0	0/0:12,0:13:23.56:0,24,321	0/0:13,0:13:33.57:0,34,495	0/0:11,0:11:30.05:0,30,369	1/1:4,17:22:42.03:527,42,0	1/1:1,14:15:36.10:401,36,0	1/1:2,20:22:54.14:602,54,0	1/1:1,25:26:69.18:769,69,0	1/1:3,8:11:24.05:267,24,0	1/1:2,15:17:36.07:401,36,0	1/1:1,10:10:24.06:268,24,0	0/0:12,0:12:36.12:0,36,569	0/0:5,0:6:5.39:0,5,92	0/0:14,0:15:41.62:0,42,605	1/1:3,26:29:60.16:668,60,0	1/1:2,14:15:36.08:400,36,0	1/1:1,22:23:60.16:669,60,0	1/1:2,6:8:18.05:200,18,0
chr10	14856803	.	G	GTTTTT	5596.72	PASS	AB=0.801;AC=45;AF=0.804;AN=56;BaseQRankSum=1.477;DP=608;FS=0.555;HRun=14;HaplotypeScore=114.7768;InbreedingCoeff=0.3452;MQ=58.94;MQ0=5;MQRankSum=-1.418;QD=10.50;ReadPosRankSum=-5.192;VQSLOD=0.2190;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,22:31:8.93:74,9,0	1/1:9,0:11:27.90:262,28,0	0/1:34,0:20:7.69:61,0,8	0/0:23,0:12:7.39:0,7,46	0/0:25,0:31:29.58:0,30,618	0/1:23,0:24:17.06:17,0,394	0/0:18,0:20:13.17:0,13,516	1/1:18,0:22:47.73:494,48,0	0/1:6,0:23:8.70:101,0,9	1/1:15,0:19:46.47:365,46,0	1/1:6,0:18:29.05:240,29,0	1/1:25,0:25:62.72:700,63,0	1/1:6,13:20:2.91:78,3,0	1/1:18,0:18:44.48:538,44,0	1/1:4,0:23:14.20:92,14,0	0/1:7,0:26:1.10:39,0,1	1/1:4,0:22:3.21:74,3,0	1/1:5,0:17:14.31:98,14,0	0/1:19,0:22:55.36:196,0,55	1/1:9,0:26:37.94:283,38,0	1/1:0,0:5:5.91:47,6,0	1/1:5,12:19:20.84:254,21,0	1/1:22,0:22:47.81:485,48,0	1/1:12,0:12:8.97:94,9,0	1/1:3,13:19:6.02:106,6,0	1/1:6,0:26:65.21:565,65,0	1/1:7,0:38:29.31:278,29,0	1/1:6,0:8:5.98:53,6,0
chr10	14858028	.	AT	A	3230.05	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=20.489;DP=700;FS=6.728;HRun=2;HaplotypeScore=132.1840;InbreedingCoeff=0.9354;MQ=86.11;MQ0=0;MQRankSum=-1.664;QD=7.86;ReadPosRankSum=6.951;VQSLOD=0.8843;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:45,2:47:66.48:459,66,0	0/0:4,0:4:12.04:0,12,180	0/0:22,0:22:65.78:0,66,857	0/0:27,0:27:66.16:0,66,901	0/0:21,0:21:63.11:0,63,886	0/0:24,0:23:72.24:0,72,1067	0/0:24,0:24:72.18:0,72,1009	0/0:37,0:37:99:0,108,1600	0/0:21,0:21:63.19:0,63,898	0/0:19,0:19:54.17:0,54,770	0/0:8,0:8:24.08:0,24,336	1/1:25,0:25:64.22:256,64,0	1/1:26,0:26:15.25:181,15,0	1/1:27,0:27:39.71:232,40,0	1/1:35,0:35:30.16:234,30,0	1/1:30,0:30:10.96:173,11,0	0/0:33,0:33:99:0,99,1415	1/1:31,0:31:22.89:206,23,0	1/1:26,0:26:10.29:174,10,0	1/1:26,1:27:1.44:326,1,0	1/1:48,0:48:92.82:448,93,0	1/1:15,0:15:40.25:182,40,0	1/1:16,0:16:32.33:155,32,0	1/1:35,0:35:5.31:200,5,0	1/1:22,1:23:33.12:228,33,0	0/0:19,0:19:57.18:0,57,835	0/0:15,0:14:45.15:0,45,674	0/0:15,0:15:45.15:0,45,664
chr10	14858030	.	TC	T	12785.94	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=18.073;DP=727;FS=7.524;HRun=4;HaplotypeScore=102.5417;InbreedingCoeff=0.9975;MQ=84.43;MQ0=0;MQRankSum=-3.239;QD=30.16;ReadPosRankSum=6.238;VQSLOD=4.1442;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,44:48:99:1408,120,0	0/0:5,0:5:15.04:0,15,194	0/0:23,0:23:54.16:0,54,713	0/0:23,0:24:60.18:0,60,792	0/0:22,0:22:66.21:0,66,906	0/0:24,0:23:72.24:0,72,1008	0/0:26,0:26:72.18:0,72,938	0/0:38,0:38:99:0,108,1478	0/0:25,0:25:72.20:0,72,942	0/0:21,0:21:60.12:0,60,796	0/0:9,0:9:27.08:0,27,359	1/1:0,25:25:75.23:900,75,0	1/1:3,26:29:72.22:864,72,0	1/1:1,26:27:75.23:899,75,0	1/1:2,33:35:87.27:1044,87,0	1/1:3,27:30:75.23:900,75,0	0/0:34,0:34:93.27:0,93,1265	1/1:1,28:29:75.23:900,75,0	1/1:3,22:25:66.20:791,66,0	1/1:4,23:27:69.20:814,69,0	1/1:1,50:51:99:1583,132,0	1/1:1,17:18:45.14:539,45,0	1/1:3,16:19:25.08:418,25,0	1/1:4,33:37:81.25:972,81,0	1/1:2,22:24:63.19:755,63,0	0/0:21,0:21:60.17:0,60,793	0/0:16,0:15:48.15:0,48,655	0/0:15,0:15:45.06:0,45,570
chr10	14862057	.	C	CAA	28874.74	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-11.408;DP=733;FS=4.690;HRun=3;HaplotypeScore=80.7385;InbreedingCoeff=0.9974;MQ=78.97;MQ0=3;MQRankSum=-3.042;QD=46.87;ReadPosRankSum=3.202;VQSLOD=4.2300;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,51:53:99:2309,126,0	1/1:0,8:8:24.05:406,24,0	0/0:14,0:14:18.45:0,18,443	0/0:22,0:22:54.14:0,54,699	0/0:19,0:19:45.15:0,45,629	0/0:20,0:20:60.17:0,60,803	0/0:42,0:42:99:0,123,1668	1/1:5,27:32:81.21:1345,81,0	1/1:3,29:32:75.26:1374,75,0	1/1:2,22:26:72.07:1063,72,0	1/1:3,12:15:30.06:515,30,0	1/1:1,32:33:84.24:1505,84,0	1/1:2,37:39:99:1869,102,0	1/1:1,32:33:96.33:1760,96,0	1/1:0,26:26:75.26:1374,75,0	1/1:2,20:22:54.19:990,54,0	1/1:0,25:25:69.24:1265,69,0	1/1:2,22:22:63.21:1126,63,0	1/1:1,23:25:72.20:1187,72,0	1/1:1,14:15:39.08:679,39,0	1/1:2,42:44:99:2200,120,0	1/1:0,23:23:63.17:1119,63,0	1/1:0,18:19:45.15:825,45,0	1/1:2,19:21:54.19:990,54,0	1/1:1,17:18:48.16:880,48,0	1/1:0,31:32:93.31:1664,93,0	1/1:3,39:41:99:1935,108,0	1/1:0,9:9:27.09:495,27,0
chr10	14863002	.	CTCCT	C	3577.55	PASS	AB=0.973;AC=19;AF=0.339;AN=56;BaseQRankSum=3.666;DP=596;FS=11.345;HRun=0;HaplotypeScore=129.6887;InbreedingCoeff=0.8704;MQ=66.46;MQ0=8;MQRankSum=-1.371;QD=16.41;ReadPosRankSum=0.606;VQSLOD=2.6006;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:60.20:0,60,1206	1/1:4,5:9:8.99:150,9,0	0/0:27,0:13:0.48:0,0,170	0/1:35,0:13:4.72:5,0,160	0/0:30,0:30:66.19:0,66,1221	0/0:16,0:16:36.10:0,36,726	0/0:19,0:19:45.14:0,45,929	1/1:14,14:28:45.12:624,45,0	1/1:8,10:17:18.03:265,18,0	1/1:11,11:22:33.09:480,33,0	1/1:11,0:11:12.02:181,12,0	0/0:20,0:20:45.10:0,45,759	0/0:16,0:16:33.10:0,33,631	0/0:16,0:15:35.77:0,36,612	0/0:20,0:20:51.17:0,51,1055	0/0:24,0:24:54.18:0,54,1055	1/1:7,15:23:27.09:474,27,0	0/0:23,0:23:52.02:0,52,940	0/0:25,0:25:48.14:0,48,897	0/0:24,0:24:66.22:0,66,1367	0/0:14,0:14:27.09:0,27,557	0/0:20,0:20:54.18:0,54,1041	0/0:12,0:11:21.07:0,21,366	0/0:20,0:20:51.14:0,51,896	0/0:23,0:23:60.20:0,60,1164	1/1:6,17:24:54.14:789,54,0	1/1:13,18:30:33.10:504,33,0	1/1:8,8:16:6.02:106,6,0
chr10	14863009	.	CTTCCT	C	2077.18	PASS	AB=0.944;AC=12;AF=0.214;AN=56;BaseQRankSum=7.449;DP=591;FS=13.772;HRun=0;HaplotypeScore=136.8048;InbreedingCoeff=0.3642;MQ=67.69;MQ0=9;MQRankSum=-2.129;QD=12.36;ReadPosRankSum=2.170;VQSLOD=2.2658;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:26:75.23:0,75,1631	0/1:6,2:8:4.63:134,0,5	0/0:34,0:15:14.11:0,14,302	0/0:34,0:12:14.43:0,14,216	0/0:25,0:25:69.08:0,69,1460	0/0:18,0:18:44.02:0,44,974	0/0:20,0:20:51.15:0,51,1201	1/1:23,1:24:3.66:478,4,0	0/1:16,0:15:6.85:139,0,7	0/1:21,0:22:83.52:309,0,84	0/1:11,0:11:8.83:114,0,9	0/0:22,0:22:51.13:0,51,984	0/0:17,0:17:39.12:0,39,808	0/0:19,0:18:29.96:0,30,773	0/0:19,0:19:54.17:0,54,1257	0/0:21,0:21:54.18:0,54,1258	1/1:19,0:19:26.97:257,27,0	0/0:24,0:24:41.67:0,42,1133	0/0:25,0:25:66:0,66,1261	0/0:27,0:27:55.19:0,55,1622	0/0:11,0:11:33.09:0,33,733	0/0:21,0:21:37.96:0,38,1207	0/0:16,0:15:38.30:0,38,639	0/0:19,0:19:54.16:0,54,1073	0/0:22,0:22:62.80:0,63,1375	0/1:26,0:26:78.56:422,0,79	0/1:27,3:29:31.83:327,0,32	1/1:12,0:11:5.95:53,6,0
chr10	14863010	.	TTCC	T	2545.89	PASS	AB=0.963;AC=14;AF=0.250;AN=56;BaseQRankSum=7.061;DP=584;FS=5.705;HRun=0;HaplotypeScore=113.4568;InbreedingCoeff=0.5368;MQ=67.85;MQ0=9;MQRankSum=-1.912;QD=15.24;ReadPosRankSum=3.329;VQSLOD=3.2358;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:27:77.30:0,77,1186	1/1:8,0:8:8.99:111,9,0	0/0:35,0:15:6.55:0,7,197	0/0:34,0:12:3.82:0,4,163	0/0:23,0:23:66.10:0,66,1101	0/0:19,0:19:52.89:0,53,747	0/0:20,0:20:50.97:0,51,847	1/1:22,0:22:7.44:529,7,0	1/1:15,1:15:3.05:216,3,0	0/1:21,1:22:47.13:384,0,47	0/1:11,0:11:6.69:166,0,7	0/0:21,0:22:50.98:0,51,728	0/0:15,0:15:39.02:0,39,622	0/0:18,0:17:46.72:0,47,583	0/0:19,0:19:56.15:0,56,925	0/0:21,0:21:54.13:0,54,907	1/1:20,0:20:12.09:301,12,0	0/0:23,0:23:59.89:0,60,819	0/0:24,0:24:65.82:0,66,973	0/0:26,0:26:74.29:0,74,1240	0/0:12,0:12:35.92:0,36,545	0/0:21,0:21:56.20:0,56,935	0/0:16,0:15:35.88:0,36,501	0/0:19,0:19:54.10:0,54,836	0/0:22,0:22:61.42:0,61,1028	0/1:24,2:26:5.77:572,0,6	0/1:29,1:29:11.68:362,0,12	1/1:12,0:11:6.02:70,6,0
chr10	14863011	.	TCC	T	2151.79	PASS	AB=0.962;AC=11;AF=0.196;AN=56;BaseQRankSum=8.314;DP=588;FS=2.045;HRun=2;HaplotypeScore=106.4334;InbreedingCoeff=0.1462;MQ=69.47;MQ0=9;MQRankSum=-1.007;QD=12.96;ReadPosRankSum=3.728;VQSLOD=1.1110;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:78.09:0,78,1080	0/1:9,0:9:11.71:81,0,12	0/0:36,0:16:5.29:0,5,164	0/0:33,0:13:0.06:0,0,149	0/0:24,0:24:68.99:0,69,1007	0/0:19,0:19:56.72:0,57,693	0/0:18,0:18:51.15:0,51,752	0/1:21,1:22:35.20:478,0,35	0/1:14,2:15:2.64:193,0,3	0/1:20,0:20:99:342,0,103	0/1:11,1:12:44.30:123,0,44	0/0:21,0:21:51.01:0,51,693	0/0:15,0:15:39.03:0,39,563	0/0:19,0:18:49.91:0,50,572	0/0:20,0:20:50.11:0,50,819	0/0:21,0:21:57.12:0,57,844	1/1:20,0:20:6.42:241,6,0	0/0:22,0:22:60.70:0,61,776	0/0:23,0:23:65.99:0,66,916	0/0:26,0:26:74.89:0,75,1092	0/0:13,0:13:38.95:0,39,509	0/0:23,0:23:40.32:0,40,829	0/0:16,0:15:35.92:0,36,484	0/0:19,0:19:54.14:0,54,750	0/0:22,0:22:63.12:0,63,930	0/1:25,1:26:39.65:496,0,40	0/1:29,0:28:49.54:290,0,50	1/1:12,0:11:2.57:53,3,0
chr10	14863226	.	A	AGC	2126.78	PASS	AB=0.929;AC=15;AF=0.268;AN=56;BaseQRankSum=-4.164;DP=678;FS=9.005;HRun=0;HaplotypeScore=125.9407;InbreedingCoeff=0.8650;MQ=75.28;MQ0=16;MQRankSum=-0.596;QD=11.62;ReadPosRankSum=0.414;VQSLOD=2.8938;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,35:39:24.05:387,24,0	0/0:10,0:10:27.07:0,27,332	0/0:40,0:12:13.07:0,13,102	0/0:52,0:22:1.48:0,1,134	0/0:13,0:13:36.12:0,36,479	0/0:24,0:24:39.12:0,39,510	0/0:27,0:27:60.20:0,60,799	0/0:42,0:41:90.67:0,91,1087	0/0:18,0:18:24.01:0,24,299	0/0:24,0:24:63.10:0,63,782	0/0:20,0:20:42.12:0,42,539	1/1:17,5:21:36.12:605,36,0	0/1:12,1:13:0:0,0,0	1/1:4,17:21:15.03:239,15,0	0/0:20,0:20:42.12:0,42,532	0/0:20,0:20:7.25:0,7,69	0/0:28,0:28:66.56:0,67,791	0/0:26,0:25:68.16:0,68,821	0/0:29,0:28:68.35:0,68,805	0/0:10,0:10:8.30:0,8,97	0/0:34,0:34:81.68:0,82,1014	1/1:6,16:22:28.27:424,28,0	1/1:0,11:11:2.71:52,3,0	1/1:3,24:27:17.74:249,18,0	1/1:3,22:27:21.07:356,21,0	0/0:26,0:26:57.08:0,57,686	0/0:18,0:17:30.03:0,30,379	0/0:13,0:13:36.12:0,36,485
chr10	14863229	.	GCGCT	G	530.16	PASS	AB=0.930;AC=20;AF=0.357;AN=56;BaseQRankSum=6.977;DP=687;FS=42.417;HRun=0;HaplotypeScore=150.9044;InbreedingCoeff=0.3925;MQ=73.24;MQ0=17;MQRankSum=-2.882;QD=1.55;ReadPosRankSum=-2.737;VQSLOD=0.6226;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:46,0:45:15.35:139,15,0	0/0:10,0:10:23.24:0,23,149	0/0:39,0:11:19.14:0,19,156	0/0:52,0:21:12.54:0,13,158	0/0:13,0:13:36.10:0,36,772	0/0:22,0:22:37.26:0,37,780	0/0:26,0:26:63.15:0,63,1177	0/0:45,0:44:39.55:0,40,563	0/1:16,2:18:11.19:11,0,104	0/0:26,0:26:43.77:0,44,360	0/0:19,0:19:38.81:0,39,283	1/1:18,1:18:20.19:141,20,0	0/1:2,12:14:0:0,0,0	1/1:25,0:24:14.98:172,15,0	0/0:20,0:20:31.03:0,31,308	0/1:19,0:18:8.61:9,0,57	0/1:29,0:29:14.60:15,0,347	0/0:28,0:27:23.09:0,23,340	0/1:29,0:28:37.80:38,0,353	0/0:11,0:11:9.14:0,9,34	0/1:35,0:35:42.72:43,0,504	1/1:20,1:21:5.29:53,5,0	1/1:12,0:12:1.55:5,2,0	1/1:28,1:29:6.51:68,7,0	0/1:27,0:27:7.29:8,0,7	0/0:22,0:22:34.52:0,35,377	0/1:18,0:17:2.95:3,0,184	0/0:13,0:13:35.57:0,36,252
chr10	14863231	.	GCT	G	868.01	PASS	AB=0.992;AC=23;AF=0.426;AN=54;BaseQRankSum=2.229;DP=675;FS=55.076;HRun=0;HaplotypeScore=131.4467;InbreedingCoeff=-0.1619;MQ=71.31;MQ0=18;MQRankSum=-2.037;QD=1.96;ReadPosRankSum=-0.181;VQSLOD=0.6187;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:46,1:46:45.44:120,0,45	0/0:10,0:10:1:0,1,43	0/0:38,0:10:18.77:0,19,124	0/0:50,0:19:12.39:0,12,136	0/0:13,0:13:33.10:0,33,465	0/0:22,0:22:37.02:0,37,526	0/0:26,0:26:63:0,63,807	0/1:41,0:40:84.73:85,0,106	1/1:16,0:16:9.29:35,9,0	0/1:25,0:25:27.02:42,0,27	0/1:19,0:19:6.83:7,0,40	0/1:20,0:18:28.26:28,0,69	./.	0/1:26,0:25:19.87:73,0,20	0/1:19,0:19:34.60:35,0,59	0/1:16,0:15:16.61:31,0,17	1/1:27,1:28:0.18:85,0,0	1/1:29,1:29:15.98:141,16,0	0/1:29,0:28:48.67:49,0,55	1/1:10,0:10:0.86:2,1,0	0/1:36,0:36:55.04:109,0,55	0/1:19,1:20:47.86:48,0,102	0/0:12,0:12:2.66:0,3,19	0/1:27,1:28:36.83:99,0,37	0/0:27,0:27:20.19:0,20,132	0/0:21,0:21:7.03:0,7,98	0/1:18,0:17:12.76:13,0,36	1/1:14,0:14:1.55:24,2,0
chr10	14863233	.	TCG	T	5627.93	PASS	AB=1.000;AC=34;AF=0.607;AN=56;BaseQRankSum=-4.815;DP=669;FS=0.000;HRun=0;HaplotypeScore=114.2481;InbreedingCoeff=0.6590;MQ=70.30;MQ0=22;MQRankSum=-1.963;QD=12.56;ReadPosRankSum=0.174;VQSLOD=4.2386;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:48,0:47:6.32:6,0,97	1/1:10,0:10:20.91:165,21,0	0/0:38,0:10:7.95:0,8,58	0/0:49,0:18:6.35:0,6,44	0/0:13,0:13:31.61:0,32,224	0/0:21,0:21:32.08:0,32,226	0/0:26,0:26:45.98:0,46,358	1/1:14,27:40:92.76:744,93,0	1/1:12,3:16:23.97:199,24,0	1/1:26,0:25:66.32:579,66,0	1/1:18,0:18:36.42:298,36,0	0/0:19,0:17:19.12:0,19,167	0/1:14,0:14:0:0,0,0	0/1:27,0:26:14.32:14,0,46	1/1:17,2:19:32.64:260,33,0	1/1:3,13:14:6.01:66,6,0	1/1:26,3:29:65.58:535,66,0	1/1:28,2:29:76.28:629,76,0	1/1:3,24:26:66.05:528,66,0	1/1:0,11:11:7.92:57,8,0	1/1:36,0:35:75.69:629,76,0	0/0:18,0:18:2.71:0,3,148	0/0:11,0:11:2.64:0,3,23	0/1:27,0:27:28.20:28,0,55	0/0:26,0:26:19.75:0,20,153	1/1:20,1:21:47.93:424,48,0	1/1:17,0:16:23.85:180,24,0	1/1:14,0:14:36.75:287,37,0
chr10	14863237	.	GCTCT	G	783.23	PASS	AB=0.976;AC=24;AF=0.480;AN=50;BaseQRankSum=3.903;DP=684;FS=14.644;HRun=0;HaplotypeScore=147.5477;InbreedingCoeff=0.1119;MQ=66.98;MQ0=34;MQRankSum=0.659;QD=1.94;ReadPosRankSum=2.341;VQSLOD=1.9201;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:47,0:46:24.67:176,25,0	./.	./.	0/0:47,0:16:0.47:0,0,1	0/0:11,0:11:11.91:0,12,106	1/1:15,8:22:3.01:46,3,0	0/1:18,6:26:3.74:84,0,4	0/0:41,0:39:10.32:0,10,43	0/1:19,0:18:19:21,0,19	0/0:29,0:27:1.63:0,2,27	0/0:19,0:18:2.96:0,3,19	1/1:19,3:19:8.25:98,8,0	./.	1/1:25,3:27:20.05:203,20,0	0/0:19,0:19:5.93:0,6,66	0/1:18,0:15:15.61:16,0,98	0/1:30,0:30:77.31:77,0,96	0/0:32,0:31:8.30:0,8,267	0/1:28,0:26:22.29:22,0,39	0/1:14,0:14:0.27:0,0,0	0/1:37,0:35:25.05:25,0,149	1/1:17,0:17:2.60:5,3,0	0/1:11,0:11:0.25:0,0,0	1/1:23,3:26:14.46:103,14,0	0/0:23,0:23:2.91:0,3,18	0/1:21,0:21:24.07:24,0,146	1/1:16,0:15:2.95:24,3,0	0/1:19,0:16:4.28:4,0,35
chr10	14863279	.	TCTCTCTCC	T	2883.12	PASS	AB=0.964;AC=21;AF=0.375;AN=56;BaseQRankSum=-4.357;DP=619;FS=2.198;HRun=0;HaplotypeScore=157.9619;InbreedingCoeff=0.0302;MQ=63.92;MQ0=32;MQRankSum=-1.808;QD=7.67;ReadPosRankSum=1.181;VQSLOD=2.5171;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:49:53.65:0,54,908	1/1:7,0:7:11.23:86,11,0	0/0:33,0:18:27.93:0,28,325	0/1:46,0:13:2.09:2,0,207	0/0:18,0:18:40.97:0,41,431	0/0:18,0:16:24.01:0,24,224	0/0:20,0:19:39.44:0,39,403	0/1:19,0:16:17.79:212,0,18	1/1:20,2:21:8.50:260,8,0	0/1:26,0:23:4.65:289,0,5	1/1:16,0:15:1.77:161,2,0	0/0:22,0:19:50.46:0,50,519	0/0:13,0:13:19.25:0,19,182	0/1:23,0:23:5.67:6,0,251	0/1:18,0:18:21.54:137,0,22	0/1:21,0:19:99:146,0,180	1/1:30,0:30:30.78:657,31,0	0/1:28,0:27:99:144,0,481	0/1:15,0:12:35.55:197,0,36	0/1:20,0:19:63.29:148,0,63	0/1:32,0:32:99:182,0,284	0/0:9,0:9:11.15:0,11,267	0/0:14,0:13:27:0,27,236	0/0:33,0:32:39.41:0,39,660	0/0:13,0:13:12.88:0,13,147	0/1:27,1:28:99:341,0,217	0/1:4,13:16:0.80:1,0,42	0/1:8,0:6:45.09:85,0,45
chr10	14863281	.	TCTCTCC	T	3662.39	PASS	AB=1.000;AC=26;AF=0.464;AN=56;BaseQRankSum=-3.279;DP=618;FS=2.192;HRun=0;HaplotypeScore=140.7881;InbreedingCoeff=0.4669;MQ=67.09;MQ0=31;MQRankSum=-1.520;QD=11.17;ReadPosRankSum=2.914;VQSLOD=2.6675;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:45:37.04:0,37,665	1/1:7,0:7:17.70:128,18,0	0/0:34,0:19:30.82:0,31,347	0/0:49,0:16:6.91:0,7,277	0/0:18,0:18:40.88:0,41,388	0/0:18,0:17:26.37:0,26,221	0/0:19,0:18:27.96:0,28,312	1/1:20,0:17:21.01:293,21,0	1/1:19,3:21:8.15:261,8,0	1/1:24,0:21:28.41:296,28,0	1/1:14,0:13:25.95:214,26,0	0/0:23,0:20:32.69:0,33,354	0/0:15,0:15:25.19:0,25,203	0/1:22,0:22:55.43:55,0,183	1/1:17,0:17:6.78:208,7,0	0/1:21,0:19:92.24:196,0,92	1/1:26,4:30:2.16:524,2,0	0/1:28,0:27:99:210,0,181	1/1:17,0:14:17.02:273,17,0	1/1:20,0:19:4.77:185,5,0	0/1:32,0:32:99:244,0,117	0/0:9,0:9:20.08:0,20,215	0/0:13,0:11:27:0,27,236	0/0:32,0:31:39.19:0,39,497	0/0:14,0:14:15.27:0,15,147	0/1:29,0:29:9.72:413,0,10	1/1:17,0:16:4.12:55,4,0	0/1:8,0:6:24.75:107,0,25
chr10	14863283	.	TCTCC	T	4240.17	PASS	AB=0.990;AC=29;AF=0.518;AN=56;BaseQRankSum=-2.288;DP=591;FS=6.211;HRun=0;HaplotypeScore=118.1473;InbreedingCoeff=0.6187;MQ=69.49;MQ0=25;MQRankSum=-0.493;QD=13.01;ReadPosRankSum=3.972;VQSLOD=4.0011;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:43:50.87:0,51,585	1/1:7,0:7:14.04:114,14,0	0/0:35,0:20:26.85:0,27,341	0/0:50,0:17:8.50:0,8,301	0/0:17,0:17:31.93:0,32,274	0/0:18,0:17:7.72:0,8,193	0/1:19,0:18:2.03:2,0,246	1/1:20,0:17:29.05:298,29,0	1/1:19,2:20:29.94:249,30,0	1/1:16,0:14:32.64:283,33,0	1/1:14,0:13:16.21:189,16,0	0/0:21,0:20:18.04:0,18,340	0/0:15,0:15:25.19:0,25,203	0/1:21,0:21:32.37:32,0,159	1/1:17,2:19:18.87:290,19,0	0/1:19,1:18:2.46:237,0,2	1/1:30,1:31:62.69:549,63,0	0/1:25,0:24:60.19:316,0,60	1/1:15,0:14:17.34:336,17,0	1/1:21,0:20:38.31:305,38,0	1/1:30,0:30:44.34:452,44,0	0/0:8,0:8:6.17:0,6,132	0/0:13,0:11:27:0,27,236	0/0:29,0:28:44.81:0,45,352	0/0:15,0:15:13.96:0,14,156	1/1:24,0:24:3.65:418,4,0	1/1:16,0:15:7.15:62,7,0	0/1:7,0:6:24.69:109,0,25
chr10	14863285	.	TCC	T	4819.91	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=-1.751;DP=575;FS=8.009;HRun=5;HaplotypeScore=98.2445;InbreedingCoeff=0.9267;MQ=71.69;MQ0=22;MQRankSum=-1.893;QD=17.66;ReadPosRankSum=3.994;VQSLOD=1.5410;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:36:64.44:0,64,613	1/1:7,0:7:17.85:133,18,0	0/0:35,0:20:26.86:0,27,341	0/0:52,0:19:7.94:0,8,300	0/0:15,0:15:28.96:0,29,255	0/0:20,0:19:32.80:0,33,276	0/0:22,0:21:41.35:0,41,360	1/1:18,0:16:39.42:338,39,0	1/1:21,0:20:32.74:262,33,0	1/1:15,1:14:35.10:307,35,0	1/1:12,0:12:23.97:199,24,0	0/0:21,0:20:46.73:0,47,394	0/0:16,0:16:31.19:0,31,255	0/0:21,0:21:29.98:0,30,215	1/1:19,0:19:41.34:348,41,0	1/1:20,0:18:39.41:352,39,0	1/1:26,1:27:65.56:523,66,0	1/1:24,0:23:60.73:502,61,0	1/1:14,1:14:38.93:340,39,0	1/1:21,0:20:42.42:336,42,0	1/1:27,1:28:59.93:531,60,0	0/0:9,0:9:11.91:0,12,129	0/0:12,0:11:30:0,30,263	0/0:26,0:26:36.28:0,36,325	0/0:15,0:15:22.55:0,23,195	1/1:22,0:22:51.92:494,52,0	1/1:16,0:15:8.05:48,8,0	0/1:7,0:6:2.80:105,0,3
chr10	14869243	.	T	TA	4480.74	PASS	AB=0.574;AC=17;AF=0.304;AN=56;BaseQRankSum=-8.528;DP=739;FS=4.065;HRun=10;HaplotypeScore=91.0041;InbreedingCoeff=0.8896;MQ=73.72;MQ0=0;MQRankSum=1.336;QD=22.18;ReadPosRankSum=-1.708;VQSLOD=4.7466;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:38:94.83:0,95,801	1/1:1,6:7:18.05:192,18,0	0/0:18,0:18:23.78:0,24,170	0/0:13,0:13:8.72:0,9,61	0/0:35,0:36:94.91:0,95,766	0/0:31,0:31:80.90:0,81,665	0/0:33,0:37:75.85:0,76,590	1/1:10,33:44:72.73:927,73,0	1/1:2,11:13:33.08:352,33,0	1/1:9,12:21:33.13:398,33,0	1/1:4,15:19:23.37:437,23,0	0/0:26,0:27:73.92:0,74,595	0/0:38,0:38:98.80:0,99,801	0/0:24,0:25:61.96:0,62,498	0/0:30,0:30:71.86:0,72,583	0/0:24,0:25:58.95:0,59,474	1/1:4,21:25:38.52:615,39,0	0/0:25,0:25:62.88:0,63,513	0/0:20,0:20:50.12:0,50,396	0/0:38,0:39:89.81:0,90,733	0/0:17,0:17:40.82:0,41,325	0/0:22,0:22:53.53:0,54,429	0/0:25,0:25:56.92:0,57,468	0/0:39,1:39:78.76:0,79,839	0/0:30,0:31:76.91:0,77,621	1/1:6,33:39:96.22:1012,96,0	0/1:8,23:31:13.91:483,0,14	1/1:0,3:3:6.02:64,6,0
chr10	14871301	.	AGTCTCCTCCAGTGACCTT	A	7365.56	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=12.163;DP=643;FS=4.872;HRun=0;HaplotypeScore=300.3151;InbreedingCoeff=0.9803;MQ=85.44;MQ0=0;MQRankSum=-10.842;QD=71.51;ReadPosRankSum=0.818;VQSLOD=4.1311;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,138,10326	0/0:6,0:6:18.06:0,18,1585	0/0:29,0:29:84.29:0,84,4179	0/0:27,0:26:58.99:0,59,4762	0/0:22,0:22:57.18:0,57,4256	0/0:28,0:28:84.29:0,84,6436	0/0:33,0:33:93.28:0,93,6947	0/0:33,0:33:96.32:0,96,6559	0/0:22,0:22:63.22:0,63,4710	0/0:29,0:29:84.28:0,84,6453	0/0:14,0:14:42.14:0,42,3451	0/0:30,0:30:90.31:0,90,7312	0/0:23,0:23:63.22:0,63,5373	0/0:28,0:28:84.29:0,84,6980	1/1:4,10:14:27.09:1116,27,0	1/1:7,16:23:36.12:1775,36,0	0/0:34,0:34:99:0,102,7970	1/1:0,7:7:21.07:1092,21,0	1/1:5,13:18:39.13:1811,39,0	1/1:3,14:17:36.12:1393,36,0	1/1:9,15:24:7.32:178,7,0	0/0:16,0:16:48.16:0,48,3923	0/0:18,0:18:54.19:0,54,4120	0/0:27,0:27:81.28:0,81,6380	0/0:15,0:15:42.14:0,42,2813	0/0:26,0:26:78.27:0,78,5870	0/0:22,0:21:63.22:0,63,5360	0/0:11,0:11:27.09:0,27,2377
chr10	14873936	.	G	GA	2139.49	PASS	AB=0.885;AC=32;AF=0.571;AN=56;BaseQRankSum=2.988;DP=558;FS=0.000;HRun=12;HaplotypeScore=89.7371;InbreedingCoeff=0.6008;MQ=52.12;MQ0=23;MQRankSum=0.801;QD=5.66;ReadPosRankSum=-1.192;VQSLOD=2.0859;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,27:33:35.26:499,35,0	0/1:10,0:9:0.99:1,0,8	0/1:21,0:2:5.75:6,0,11	0/1:17,0:5:9.60:15,0,10	0/0:19,1:18:16.75:0,17,276	0/0:22,2:23:27.46:0,27,362	0/0:19,0:19:32.80:0,33,276	1/1:27,0:26:12.40:25,12,0	1/1:14,0:14:1.73:5,2,0	1/1:23,0:23:13.42:28,13,0	0/1:22,0:21:5.64:6,0,9	1/1:9,4:12:29.28:253,29,0	1/1:4,14:18:16.08:222,16,0	0/1:9,6:16:4.16:193,0,4	0/0:2,0:14:20.37:0,20,59	0/0:2,0:15:22.40:0,22,65	1/1:39,0:36:12.92:31,13,0	0/0:5,0:25:30.55:0,31,88	0/0:7,0:17:21.47:0,21,61	0/0:4,0:21:35.82:0,36,115	0/0:5,0:19:20.36:0,20,59	1/1:8,7:15:16.63:256,17,0	0/1:7,11:18:2.17:136,0,2	1/1:12,5:13:33.01:308,33,0	1/1:3,18:21:33.05:320,33,0	1/1:18,0:18:6.51:15,7,0	1/1:22,0:22:1.93:6,2,0	1/1:12,0:9:4.01:9,4,0
chr10	14873948	.	AG	A	5023.41	PASS	AB=1.000;AC=20;AF=0.357;AN=56;BaseQRankSum=5.382;DP=543;FS=10.653;HRun=1;HaplotypeScore=79.1186;InbreedingCoeff=0.7749;MQ=58.56;MQ0=16;MQRankSum=-0.398;QD=23.36;ReadPosRankSum=-1.481;VQSLOD=3.4073;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:51.47:0,51,317	1/1:4,5:8:23.95:263,24,0	0/0:29,0:5:7.04:0,7,60	0/1:22,0:9:18.30:18,0,68	0/0:21,0:19:56.35:0,56,528	0/0:25,0:24:71.65:0,72,703	0/0:19,0:19:38.81:0,39,510	1/1:10,17:26:66.17:816,66,0	1/1:0,11:11:27.09:353,27,0	1/1:0,22:22:66.10:821,66,0	1/1:6,14:20:52.89:625,53,0	0/0:12,0:12:1.16:0,1,89	0/0:17,0:17:21.40:0,21,109	0/0:11,0:11:4.74:0,5,124	0/0:17,0:16:4.05:0,4,48	0/0:15,0:15:10.85:0,11,59	1/1:2,33:33:69.23:927,69,0	0/1:24,0:22:1.86:6,0,2	0/0:22,0:21:30.47:0,30,244	0/0:23,0:23:8.52:0,9,95	0/0:19,0:18:16.12:0,16,92	0/0:12,0:12:28.14:0,28,135	0/0:15,0:14:12.82:0,13,141	0/0:17,0:15:15.47:0,15,131	0/0:22,0:22:30.21:0,30,245	1/1:1,19:20:53.71:636,54,0	1/1:0,16:16:26.69:353,27,0	1/1:2,7:7:15.05:205,15,0
chr10	14874835	.	CCACACACACACACACACACACACA	C	9090.34	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=8.785;DP=786;FS=4.077;HRun=0;HaplotypeScore=391.9212;InbreedingCoeff=0.9176;MQ=60.62;MQ0=10;MQRankSum=-3.888;QD=38.85;ReadPosRankSum=1.014;VQSLOD=2.4528;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:44:39.02:0,39,1519	1/1:0,6:6:9.03:578,9,0	0/0:29,0:18:36.12:0,36,1038	0/0:29,0:19:34.82:0,35,851	0/0:21,0:22:54.15:0,54,3966	0/0:21,0:23:60.17:0,60,4335	0/0:27,0:34:90.30:0,90,5996	1/1:4,28:31:75.17:1341,75,0	1/1:5,32:37:15.05:801,15,0	1/1:3,38:41:81.01:2778,81,0	1/1:3,21:24:2.99:166,3,0	0/0:28,0:34:68.47:0,68,3833	0/0:12,0:29:37.35:0,37,2221	0/0:22,0:38:53.66:0,54,2833	0/0:30,0:33:28.80:0,29,1041	0/0:15,0:15:30.09:0,30,1293	1/1:3,26:29:9.92:543,10,0	0/0:20,0:20:36.09:0,36,1699	0/0:12,0:17:42.12:0,42,2648	0/0:13,0:13:18.05:0,18,520	0/0:52,0:56:90.42:0,90,5393	0/0:24,0:30:39.13:0,39,2561	0/0:8,0:22:6.48:0,6,139	0/0:18,0:40:27.09:0,27,1827	0/0:15,0:18:30.06:0,30,1486	1/1:3,30:33:50.96:1580,51,0	1/1:3,25:27:18.06:1155,18,0	1/1:4,0:4:6.02:149,6,0
chr10	14874867	.	ACG	A	3065.48	PASS	AB=0.982;AC=23;AF=0.411;AN=56;BaseQRankSum=2.192;DP=862;FS=14.706;HRun=0;HaplotypeScore=222.1206;InbreedingCoeff=0.2720;MQ=51.24;MQ0=17;MQRankSum=1.949;QD=6.12;ReadPosRankSum=-2.751;VQSLOD=1.7275;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:42,0:42:33.60:350,34,0	0/0:7,0:7:2.37:0,2,21	0/1:16,0:6:4.55:5,0,77	0/0:24,0:12:26.88:0,27,227	0/0:27,0:27:41.07:0,41,699	0/0:28,0:27:0.53:0,1,575	0/0:45,0:45:45.70:0,46,1130	0/0:32,0:31:32.36:0,32,213	0/0:36,0:36:15.69:0,16,117	0/0:44,0:44:6.28:0,6,120	0/0:22,0:21:2.89:0,3,17	0/1:31,1:32:16.47:339,0,16	1/1:37,0:37:37.10:396,37,0	0/1:39,0:38:7.91:306,0,8	1/1:39,1:40:0.92:21,1,0	0/1:24,0:24:15.46:15,0,20	0/0:31,0:30:8.36:0,8,58	0/1:22,1:23:35.56:66,0,36	1/1:31,0:28:30.48:251,30,0	0/1:14,1:15:3.22:68,0,3	1/1:70,0:68:45.92:517,46,0	0/1:36,1:37:4.40:274,0,4	1/1:26,0:26:17.47:149,17,0	0/1:43,0:41:37.14:115,0,37	1/1:18,4:22:41.44:365,41,0	0/0:36,0:35:31.83:0,32,250	0/0:29,0:26:4.95:0,5,25	0/1:4,0:4:8.33:8,0,27
chr10	14874869	.	GCA	G	1603.51	PASS	AB=0.975;AC=13;AF=0.232;AN=56;BaseQRankSum=-1.045;DP=869;FS=2.280;HRun=0;HaplotypeScore=229.4681;InbreedingCoeff=-0.0181;MQ=51.54;MQ0=16;MQRankSum=2.055;QD=4.96;ReadPosRankSum=-1.075;VQSLOD=2.8757;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:43,0:43:19.78:20,0,59	0/0:7,0:7:8.49:0,8,61	0/1:15,1:5:18.17:18,0,171	0/0:23,1:13:28.78:0,29,480	0/0:27,0:27:69.11:0,69,1083	0/0:28,0:27:64.38:0,64,889	0/0:46,0:46:99:0,118,1668	0/0:31,0:30:32.98:0,33,454	0/0:37,0:37:17.84:0,18,203	0/0:46,0:46:44.19:0,44,465	0/0:23,0:22:6.02:0,6,79	0/0:33,0:33:2.05:0,2,256	0/1:35,0:35:3.44:3,0,139	0/0:39,0:38:2.53:0,3,258	0/1:37,2:39:0.70:1,0,20	0/0:24,0:24:0.39:0,0,38	0/0:31,0:30:12.45:0,12,135	0/1:24,0:24:11.60:12,0,89	1/1:24,5:27:54.38:672,54,0	0/1:13,1:14:25.18:59,0,25	0/1:66,4:68:71.38:910,0,71	0/0:37,0:37:27.16:0,27,265	1/1:26,0:26:0.36:2,0,0	0/0:43,0:41:22.74:0,23,230	0/1:23,0:23:17.28:17,0,51	0/0:39,0:38:57.37:0,57,696	0/0:31,0:27:17.90:0,18,130	0/1:4,0:4:30.89:31,0,69
chr10	14874871	.	A	ACACACG	2250.09	PASS	AB=0.871;AC=16;AF=0.286;AN=56;BaseQRankSum=0.932;DP=887;FS=3.909;HRun=0;HaplotypeScore=278.0712;InbreedingCoeff=0.1802;MQ=51.57;MQ0=16;MQRankSum=0.136;QD=5.56;ReadPosRankSum=-0.239;VQSLOD=2.3365;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:44,0:44:5.76:6,0,304	0/0:7,0:7:12.01:0,12,227	0/1:19,0:7:12.15:12,0,313	0/0:24,0:14:33.96:0,34,623	0/0:27,0:27:69.23:0,69,1501	0/0:29,0:28:65.84:0,66,1392	0/0:48,0:48:99:0,117,2143	0/0:32,0:31:33.09:0,33,632	0/0:36,0:36:16.49:0,16,339	0/0:46,0:46:68.62:0,69,1091	0/0:26,0:25:6.02:0,6,100	0/1:32,0:32:99:124,0,280	0/1:36,0:36:77.92:78,0,239	0/1:38,0:37:47.11:47,0,436	1/1:8,28:41:2.90:57,3,0	0/1:1,23:25:11.63:153,0,12	0/0:31,0:30:15.52:0,16,286	0/1:8,0:25:1.68:177,0,2	1/1:29,0:30:47.22:778,47,0	0/1:5,8:15:3.16:10,0,3	1/1:69,0:69:29.60:878,30,0	0/0:37,0:37:41.28:0,41,462	0/0:25,0:25:20.30:0,20,157	0/0:42,0:40:35.07:0,35,336	0/1:23,0:23:86.62:87,0,140	0/0:40,0:39:63.06:0,63,1082	0/0:31,0:27:23.11:0,23,410	0/1:4,0:4:11.56:12,0,107
chr10	14875837	.	CGTGT	C	10975.10	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-4.717;DP=696;FS=29.718;HRun=0;HaplotypeScore=154.2389;InbreedingCoeff=0.9101;MQ=51.98;MQ0=19;MQRankSum=5.116;QD=25.06;ReadPosRankSum=5.342;VQSLOD=2.7460;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,52:56:81.28:1357,81,0	0/0:7,0:7:3.01:0,3,53	0/0:40,0:12:2.14:0,2,37	0/0:41,0:9:8.92:0,9,133	0/0:17,0:18:38.83:0,39,780	0/0:17,0:18:44.83:0,45,907	0/0:24,0:27:63.73:0,64,1140	0/0:16,0:16:29.90:0,30,324	0/0:11,0:10:20.89:0,21,239	0/0:17,0:17:33.06:0,33,544	0/0:5,0:5:8.99:0,9,74	1/1:9,32:42:63.81:1016,64,0	1/1:13,11:24:61.06:834,61,0	1/1:5,25:30:36:604,36,0	1/1:7,15:24:37.92:570,38,0	1/1:7,7:15:26.96:399,27,0	0/0:22,0:22:20.79:0,21,552	1/1:11,22:34:62.38:967,62,0	1/1:11,5:15:9.89:272,10,0	1/1:6,5:12:24:342,24,0	1/1:49,25:71:97.75:1336,98,0	1/1:3,11:14:9.09:337,9,0	1/1:3,21:24:35.97:603,36,0	1/1:20,30:50:99:1886,117,0	1/1:7,15:22:27.09:453,27,0	0/0:24,0:24:56.99:0,57,727	0/0:8,0:8:15.03:0,15,249	0/0:4,0:4:11.97:0,12,141
chr10	14875901	.	CGT	C	2591.72	PASS	AB=0.653;AC=22;AF=0.423;AN=52;BaseQRankSum=2.919;DP=573;FS=14.886;HRun=0;HaplotypeScore=153.6790;InbreedingCoeff=0.7426;MQ=47.60;MQ0=14;MQRankSum=-3.424;QD=12.52;ReadPosRankSum=-0.404;VQSLOD=2.3330;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,1:38:24.08:0,24,394	./.	0/0:33,0:8:14.91:0,15,152	0/0:41,0:7:6:0,6,87	0/0:17,0:16:42.12:0,42,661	0/0:21,0:21:45.15:0,45,725	0/0:28,1:29:31.08:0,31,1033	0/1:4,0:3:0:0,0,0	0/1:0,2:2:0:0,0,0	1/1:1,2:2:6.01:61,6,0	0/1:0,4:4:0:0,0,0	0/0:32,2:33:29.61:0,30,421	0/0:30,0:30:35.82:0,36,510	0/0:26,0:26:27.09:0,27,440	1/1:7,14:21:24.05:279,24,0	1/1:3,15:19:0.50:172,1,0	1/1:0,1:1:3:27,3,0	1/1:8,20:28:58.44:680,58,0	1/1:5,15:19:39.10:473,39,0	0/1:4,7:11:0:0,0,0	1/1:37,51:85:80.22:1011,80,0	0/0:16,0:15:24.08:0,24,396	0/0:11,0:11:9.03:0,9,132	0/0:45,0:45:33.11:0,33,543	0/0:23,0:23:14.41:0,14,160	1/1:3,1:3:7.97:39,8,0	1/1:1,1:2:2.97:20,3,0	./.
chr10	14875913	.	TGC	T	1107.62	PASS	AB=0.997;AC=19;AF=0.339;AN=56;BaseQRankSum=5.283;DP=585;FS=17.069;HRun=0;HaplotypeScore=149.5076;InbreedingCoeff=0.2718;MQ=44.06;MQ0=20;MQRankSum=-3.805;QD=3.89;ReadPosRankSum=1.069;VQSLOD=1.9523;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,2:36:7.70:0,8,397	0/0:3,0:3:2.84:0,3,14	0/0:36,0:8:5.42:0,5,177	0/1:50,0:9:27.71:28,0,97	0/0:17,0:16:42.13:0,42,769	0/0:24,0:24:58.19:0,58,879	0/0:28,0:28:60.52:0,61,1307	0/1:6,0:3:0:0,0,0	0/1:3,0:3:0:1,0,0	1/1:4,0:3:5.88:37,6,0	0/1:5,0:5:0.09:0,0,0	0/0:27,4:31:9.45:0,9,391	0/0:25,1:26:32.81:0,33,466	0/1:30,0:31:23.99:24,0,449	1/1:16,0:16:17.02:99,17,0	0/1:19,0:19:29.40:97,0,29	0/1:5,0:5:10.02:18,0,10	1/1:27,0:27:31.04:336,31,0	0/1:19,0:18:14.74:194,0,15	0/0:9,0:9:2.85:0,3,19	1/1:89,0:85:14.06:399,14,0	0/0:16,0:15:24.07:0,24,419	0/0:9,1:10:8.92:0,9,169	0/0:39,0:40:33.08:0,33,598	0/0:18,2:20:8.72:0,9,128	0/1:6,0:5:23.40:29,0,23	0/1:4,0:4:3.93:4,0,5	0/1:1,0:1:0:0,0,0
chr10	14875917	.	TGCAC	T	664.86	PASS	AB=0.859;AC=20;AF=0.357;AN=56;BaseQRankSum=5.592;DP=580;FS=15.703;HRun=0;HaplotypeScore=155.5822;InbreedingCoeff=0.3882;MQ=43.51;MQ0=22;MQRankSum=-4.482;QD=3.29;ReadPosRankSum=-3.464;VQSLOD=0.6200;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:26,11:35:81.46:81,0,416	1/1:3,1:4:5.92:41,6,0	0/0:37,0:7:2.82:0,3,189	0/1:50,0:8:0.55:1,0,199	0/0:18,0:17:45.11:0,45,1082	0/0:25,0:25:17.34:0,17,1121	0/0:31,0:31:87.30:0,87,2062	0/0:7,0:3:0:0,0,0	1/1:3,0:3:9.01:86,9,0	1/1:3,1:4:11.93:105,12,0	0/1:3,0:5:10.81:23,0,11	0/1:24,5:28:31.81:32,0,426	0/0:20,2:22:20.80:0,21,332	0/1:21,6:27:99:143,0,526	0/0:17,0:17:22.88:0,23,357	0/0:19,0:19:9.18:0,9,251	1/1:5,0:5:12.01:123,12,0	0/1:26,0:26:14.02:14,0,576	0/0:21,0:20:50.74:0,51,695	0/0:9,0:9:2.62:0,3,34	0/0:89,0:85:81.63:0,82,1585	0/0:14,2:14:18.06:0,18,376	0/0:9,1:10:8.56:0,9,178	0/0:38,0:39:30.05:0,30,681	0/0:13,5:18:8.82:0,9,130	1/1:5,0:4:4.24:57,4,0	1/1:3,2:5:11.38:98,11,0	1/1:1,0:1:3.01:34,3,0
chr10	14875918	.	GCA	G	420.63	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=6.147;DP=580;FS=20.624;HRun=0;HaplotypeScore=146.7416;InbreedingCoeff=0.5010;MQ=42.28;MQ0=22;MQRankSum=-2.440;QD=3.14;ReadPosRankSum=-3.250;VQSLOD=-0.0516;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:37,0:35:35.15:35,0,272	0/1:4,0:4:0.71:12,0,1	0/0:37,1:7:12.46:0,12,118	0/0:48,0:7:8.77:0,9,183	0/0:17,0:17:44.74:0,45,738	0/0:23,0:23:52.92:0,53,840	0/0:30,0:30:78.28:0,78,1399	0/1:7,0:3:0:0,0,0	1/1:3,0:3:9.02:98,9,0	1/1:5,0:4:10.56:67,11,0	1/1:5,0:5:3:28,3,0	0/1:29,0:28:10.81:11,0,259	0/0:21,0:21:17.75:0,18,202	0/1:28,0:28:99:110,0,313	0/0:17,0:17:23.23:0,23,249	0/0:19,0:19:17.27:0,17,200	1/1:5,0:5:11.41:81,11,0	0/0:25,1:26:6.51:0,7,431	0/0:20,0:19:53.68:0,54,570	0/0:9,0:9:2.90:0,3,26	0/0:90,2:88:82.91:0,83,1118	0/0:16,0:14:16.87:0,17,216	0/0:9,1:10:5.92:0,6,103	0/0:39,0:39:30.10:0,30,435	0/0:18,0:18:5.72:0,6,70	1/1:5,0:4:2.95:48,3,0	1/1:5,0:5:10.70:71,11,0	1/1:1,0:1:3.01:30,3,0
chr10	14875921	.	C	CGTGTGTGTGTGTGT	2233.08	PASS	AB=1.000;AC=30;AF=0.536;AN=56;BaseQRankSum=1.570;DP=619;FS=12.924;HRun=0;HaplotypeScore=218.8374;InbreedingCoeff=0.5065;MQ=42.32;MQ0=21;MQRankSum=-0.316;QD=8.62;ReadPosRankSum=-3.335;VQSLOD=0.9471;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:37,0:35:14.84:346,15,0	0/1:5,0:5:14.64:36,0,15	1/1:38,0:7:2.98:21,3,0	0/0:46,0:6:5.59:0,6,140	0/0:19,0:19:33.11:0,33,1128	0/0:21,0:25:28.48:0,28,1266	0/0:29,0:31:63.10:0,63,1794	1/1:9,0:5:6.48:71,6,0	1/1:4,0:4:9.02:102,9,0	1/1:7,0:6:3.43:140,3,0	0/1:7,0:6:10.10:29,0,10	1/1:29,0:29:18.40:333,18,0	1/1:7,12:22:3.90:57,4,0	1/1:30,0:31:22.96:698,23,0	0/0:14,0:15:9.23:0,9,176	0/0:19,0:19:11.68:0,12,223	1/1:9,0:9:10.20:95,10,0	0/0:25,0:26:1.81:0,2,337	0/0:20,0:18:15.61:0,16,157	0/0:9,0:9:1.62:0,2,51	0/0:95,0:93:9.54:0,10,188	1/1:16,0:14:5.96:141,6,0	0/1:9,0:9:0:1,0,0	0/0:21,24:52:0.47:0,0,1	1/1:17,0:18:5:126,5,0	0/1:8,0:5:6.25:35,0,6	1/1:7,0:7:15.03:151,15,0	1/1:2,0:2:3.01:31,3,0
chr10	14875943	.	TGTGTGC	T	944.78	PASS	AB=0.992;AC=20;AF=0.357;AN=56;BaseQRankSum=1.480;DP=628;FS=4.575;HRun=0;HaplotypeScore=167.8923;InbreedingCoeff=-0.1980;MQ=46.29;MQ0=13;MQRankSum=1.393;QD=2.19;ReadPosRankSum=-2.364;VQSLOD=1.9604;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:38,0:35:99:128,0,187	0/0:12,0:12:1.85:0,2,39	0/0:29,0:1:2.99:0,3,23	0/0:30,0:10:23.06:0,23,325	0/0:19,0:19:47.15:0,47,1318	0/0:25,0:25:66.17:0,66,1818	0/0:38,0:38:87.29:0,87,2757	0/1:19,0:15:76.09:76,0,210	0/0:7,0:7:9.02:0,9,100	0/1:16,0:16:26.25:26,0,318	0/0:8,0:7:8.70:0,9,107	0/1:31,0:30:82.69:135,0,83	0/1:17,0:17:11.74:17,0,12	0/1:30,0:30:43.69:44,0,174	1/1:15,1:16:20.77:136,21,0	0/1:20,2:22:9.83:39,0,10	0/0:13,0:13:11:0,11,152	1/1:22,1:23:5.64:131,6,0	0/1:13,0:12:11.99:94,0,12	1/1:8,1:9:2.29:12,2,0	0/1:87,2:87:18.99:19,0,59	0/1:13,0:12:13.93:14,0,52	0/1:9,0:9:41.07:41,0,57	0/1:52,0:52:38.37:123,0,38	0/1:18,0:18:32.11:32,0,133	0/1:16,0:14:40.44:40,0,280	0/0:12,0:11:14.88:0,15,202	0/0:4,0:4:3:0,3,29
chr10	14875945	.	TGTGC	T	2664.82	PASS	AB=0.993;AC=24;AF=0.429;AN=56;BaseQRankSum=0.557;DP=621;FS=8.260;HRun=0;HaplotypeScore=149.7830;InbreedingCoeff=0.1870;MQ=47.73;MQ0=13;MQRankSum=0.667;QD=6.27;ReadPosRankSum=-3.417;VQSLOD=0.6484;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:39,0:36:99:164,0,101	0/0:12,0:12:6.86:0,7,41	0/0:29,0:2:0.89:0,1,2	0/0:28,0:10:19.92:0,20,250	0/0:19,0:19:19.38:0,19,972	0/0:25,0:25:65.99:0,66,1312	0/0:38,0:38:99:0,108,1977	0/1:18,0:14:96.21:96,0,124	0/0:7,0:7:5.96:0,6,19	0/1:17,0:17:46.99:47,0,150	0/0:8,0:7:7.42:0,7,88	0/1:31,0:30:17.15:147,0,17	0/1:17,0:17:0.85:18,0,1	0/1:31,0:31:60.45:109,0,60	1/1:8,8:16:24.48:303,24,0	1/1:3,18:21:12.04:237,12,0	0/0:13,0:13:4.50:0,4,54	1/1:11,11:22:42.92:655,43,0	1/1:8,6:13:30.01:455,30,0	1/1:1,8:9:2.77:59,3,0	1/1:22,64:84:13.77:245,14,0	0/1:12,1:12:9.57:37,0,10	0/1:9,0:9:13.98:41,0,14	1/1:49,0:49:17.56:147,18,0	0/1:17,0:17:36.87:41,0,37	0/1:16,0:14:42.51:43,0,141	0/0:13,0:12:13.48:0,13,104	0/0:4,0:4:1.25:0,1,3
chr10	14875950	.	GCGCA	G	544.17	PASS	AB=0.924;AC=14;AF=0.250;AN=56;BaseQRankSum=6.202;DP=607;FS=7.632;HRun=0;HaplotypeScore=154.6341;InbreedingCoeff=0.0700;MQ=50.99;MQ0=13;MQRankSum=-2.942;QD=1.90;ReadPosRankSum=1.229;VQSLOD=1.7271;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:39,2:38:34.56:35,0,460	0/0:13,0:13:2.52:0,3,105	0/0:28,0:4:6.01:0,6,128	0/0:32,0:14:27.19:0,27,531	0/0:18,0:19:50.97:0,51,1122	0/0:26,0:26:69.23:0,69,1619	0/0:35,0:35:96.31:0,96,2303	0/0:16,0:13:37.46:0,37,341	0/0:7,0:7:9.03:0,9,110	0/0:18,0:18:43.40:0,43,384	0/0:8,0:7:8.88:0,9,138	0/1:26,5:30:89.23:89,0,260	0/0:12,0:12:6.01:0,6,61	0/1:26,3:29:91.58:92,0,256	0/1:15,0:15:26.24:26,0,53	1/1:20,0:20:11.18:75,11,0	0/0:16,0:16:9.35:0,9,193	0/1:22,0:22:99:163,0,136	0/1:12,0:11:38.69:113,0,39	1/1:9,0:9:2.64:15,3,0	1/1:76,1:75:7.50:31,7,0	0/1:11,3:13:30.18:30,0,43	0/0:6,2:8:5.53:0,6,48	0/0:48,0:48:28.99:0,29,245	0/1:14,3:17:33.19:33,0,145	0/0:17,0:15:39.14:0,39,388	0/0:13,0:12:14.72:0,15,225	0/0:4,0:4:3.01:0,3,39
chr10	14875952	.	GCA	G	176.07	PASS	AB=0.965;AC=15;AF=0.268;AN=56;BaseQRankSum=6.383;DP=616;FS=11.688;HRun=0;HaplotypeScore=147.1820;InbreedingCoeff=0.0145;MQ=52.59;MQ0=12;MQRankSum=-3.729;QD=0.73;ReadPosRankSum=-1.492;VQSLOD=1.3843;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:42,0:39:18.12:18,0,112	0/1:13,0:13:0.46:0,0,51	0/0:29,0:5:9:0,9,110	0/0:34,0:16:33.96:0,34,428	0/0:19,0:19:48.92:0,49,738	0/0:24,0:24:68.39:0,68,1021	0/0:35,0:35:97.38:0,97,1523	0/1:16,0:13:3.46:3,0,82	0/0:7,0:7:4.83:0,5,19	0/0:18,0:18:4.67:0,5,112	0/0:9,0:8:6.33:0,6,55	0/1:30,2:31:41.28:41,0,81	0/0:13,0:13:5.12:0,5,30	0/1:25,3:28:51.53:88,0,52	0/1:16,1:17:5.74:6,0,39	1/1:20,0:20:3.96:17,4,0	0/0:18,0:18:3.66:0,4,70	1/1:21,0:21:1.07:47,1,0	0/1:13,0:13:24.69:25,0,41	0/1:9,0:9:0.11:0,0,0	0/0:77,1:76:1.77:0,2,24	1/1:12,1:12:3.98:49,4,0	0/0:9,0:9:2.89:0,3,25	0/0:45,1:46:3.37:0,3,25	0/1:16,2:18:14.59:15,0,56	0/0:18,0:16:6.82:0,7,136	0/0:13,0:12:13.13:0,13,106	0/0:4,0:4:2.68:0,3,11
chr10	14875955	.	C	CGT	2698.37	PASS	AB=0.794;AC=18;AF=0.321;AN=56;BaseQRankSum=3.199;DP=637;FS=8.894;HRun=0;HaplotypeScore=144.9721;InbreedingCoeff=0.7273;MQ=55.71;MQ0=12;MQRankSum=-1.211;QD=19.41;ReadPosRankSum=-0.427;VQSLOD=3.6859;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:39:51.38:0,51,671	1/1:4,9:13:15.03:222,15,0	0/0:27,0:7:8.76:0,9,116	0/0:32,0:16:26.14:0,26,303	0/0:18,0:18:32.82:0,33,379	0/0:25,0:25:66.20:0,66,833	0/0:35,0:35:84.23:0,84,1060	1/1:6,12:15:35.67:449,36,0	1/1:0,8:9:9.03:149,9,0	1/1:0,19:20:51.17:756,51,0	0/1:3,7:9:29.51:92,0,30	0/0:35,0:34:35.09:0,35,447	0/0:13,0:13:9.03:0,9,113	0/0:29,0:29:11.65:0,12,359	0/0:18,0:18:29.98:0,30,370	0/0:22,0:22:15.03:0,15,173	1/1:2,16:18:18.05:286,18,0	0/0:22,0:22:42.85:0,43,604	0/0:15,0:15:20.90:0,21,244	0/0:10,0:10:2.85:0,3,38	0/0:80,0:78:11.22:0,11,154	0/1:13,0:12:2.43:2,0,98	0/0:9,0:9:9.03:0,9,116	0/0:48,0:48:35.90:0,36,446	0/0:18,0:18:2.74:0,3,176	1/1:4,14:20:48.06:633,48,0	1/1:2,11:12:15.05:252,15,0	1/1:0,4:4:3.01:50,3,0
chr10	14878642	.	A	AC	1070.04	PASS	AB=0.980;AC=9;AF=0.161;AN=56;BaseQRankSum=2.674;DP=513;FS=24.153;HRun=0;HaplotypeScore=99.4377;InbreedingCoeff=0.1183;MQ=47.28;MQ0=16;MQRankSum=7.488;QD=5.57;ReadPosRankSum=3.634;VQSLOD=1.2102;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:68.76:0,69,465	0/0:1,0:1:2.22:0,2,7	0/0:27,0:8:23.31:0,23,167	0/0:15,0:6:14.86:0,15,132	0/0:20,0:19:48.36:0,48,336	0/0:22,0:21:62.48:0,62,467	0/0:12,0:11:29.72:0,30,215	0/1:30,1:29:3.70:232,0,4	0/1:16,0:16:37.54:38,0,95	0/1:30,0:30:47.01:249,0,47	0/1:12,0:12:39.94:86,0,40	0/0:23,0:22:56.52:0,57,438	0/0:13,0:13:28.04:0,28,202	0/0:17,0:17:38.72:0,39,292	0/0:21,0:21:62.76:0,63,511	0/0:20,0:19:56.58:0,57,420	0/1:33,0:32:85.06:113,0,85	0/0:17,0:17:47.56:0,48,362	0/0:25,0:23:68.45:0,68,538	0/0:15,0:14:37.52:0,38,266	0/0:8,0:8:11.96:0,12,126	0/0:11,0:11:26.65:0,27,192	0/0:6,0:6:16.88:0,17,103	0/0:14,0:14:17.26:0,17,122	0/0:5,0:5:8.88:0,9,59	1/1:28,1:28:32.11:300,32,0	0/1:28,1:28:69.36:144,0,69	0/1:11,1:12:53.74:54,0,62
chr10	14880085	.	CA	C	1028.83	PASS	AB=0.823;AC=28;AF=0.500;AN=56;BaseQRankSum=4.612;DP=557;FS=7.016;HRun=16;HaplotypeScore=68.0893;InbreedingCoeff=0.3306;MQ=49.25;MQ0=13;MQRankSum=2.056;QD=2.69;ReadPosRankSum=1.675;VQSLOD=-0.6443;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:21,17:38:9.47:138,9,0	0/0:6,0:6:5.95:0,6,44	0/0:8,1:3:2.12:0,2,19	0/0:6,0:2:1.55:0,2,4	0/0:15,0:15:12.17:0,12,205	0/0:18,2:20:11.82:0,12,183	0/1:18,1:21:17.57:18,0,107	0/0:19,2:21:29.70:0,30,223	0/0:25,0:24:14.90:0,15,114	0/0:16,2:18:23.29:0,23,173	0/1:16,1:17:12.18:12,0,115	1/1:12,9:21:2.41:17,2,0	0/1:16,7:25:20.32:73,0,20	1/1:9,0:9:8.48:51,8,0	1/1:11,4:17:1.93:33,2,0	0/1:10,12:21:5.38:57,0,5	0/0:28,1:31:42.53:0,43,321	1/1:9,15:27:8.79:142,9,0	1/1:18,6:23:25.14:145,25,0	0/1:14,3:17:16.68:27,0,17	1/1:7,7:12:10.08:57,10,0	0/1:11,9:23:23.04:91,0,23	1/1:6,3:10:15.68:81,16,0	1/1:15,14:27:28.34:167,28,0	1/1:10,9:19:16.38:95,16,0	0/0:20,0:20:23.85:0,24,186	0/1:27,1:27:1.74:2,0,181	0/1:11,1:9:6.05:6,0,58
chr10	14881452	.	T	TC	7130.90	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-7.893;DP=637;FS=9.126;HRun=2;HaplotypeScore=64.7842;InbreedingCoeff=0.9904;MQ=82.96;MQ0=0;MQRankSum=-2.041;QD=39.18;ReadPosRankSum=1.134;VQSLOD=5.0640;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,141,1726	1/1:0,11:11:33.11:475,33,0	0/0:17,0:17:48.13:0,48,568	0/0:18,0:18:48.12:0,48,576	0/0:11,0:11:33.10:0,33,408	0/0:16,0:16:48.15:0,48,594	0/0:22,0:22:63.20:0,63,781	1/1:2,18:20:51.16:716,51,0	1/1:1,26:27:69.23:992,69,0	1/1:2,16:18:51.17:719,51,0	1/1:0,19:20:60.20:861,60,0	0/0:30,0:30:90.28:0,90,1105	0/0:17,0:17:42.13:0,42,520	0/0:33,0:33:99:0,99,1202	0/0:26,0:26:75.23:0,75,919	0/0:13,0:13:36.11:0,36,446	1/1:3,48:51:99:1900,132,0	0/0:42,0:42:99:0,126,1548	0/0:20,0:20:51.13:0,51,607	0/0:8,0:8:24.07:0,24,293	0/0:48,0:47:99:0,144,1784	0/0:13,0:13:39.12:0,39,479	0/0:20,0:20:60.18:0,60,730	0/0:34,0:34:99:0,99,1207	0/0:17,0:17:51.16:0,51,631	1/1:0,15:15:45.15:648,45,0	1/1:1,16:17:48.16:690,48,0	1/1:0,3:3:9.03:130,9,0
chr10	14884804	.	T	TCTAA	15119.05	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-10.854;DP=697;FS=1.354;HRun=0;HaplotypeScore=110.3777;InbreedingCoeff=0.9996;MQ=82.70;MQ0=0;MQRankSum=-6.145;QD=71.65;ReadPosRankSum=-1.008;VQSLOD=6.6547;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,99,1830	1/1:3,9:13:36.12:966,36,0	0/0:24,0:25:38.25:0,38,971	0/0:15,0:16:42.10:0,42,751	0/0:24,0:24:72.25:0,72,1384	0/0:17,0:17:48.16:0,48,925	0/0:34,0:34:96.30:0,96,1774	1/1:8,18:30:84.23:2019,84,0	1/1:4,19:24:66.23:1770,66,0	1/1:6,16:26:72.22:1830,72,0	1/1:1,13:14:42.10:1078,42,0	0/0:35,0:35:99:0,105,1988	0/0:36,0:36:99:0,108,2056	0/0:26,0:26:78.27:0,78,1510	0/0:37,0:37:99:0,111,2119	0/0:20,0:19:54.19:0,54,1047	1/1:3,35:41:99:2866,108,0	0/0:28,0:28:78.27:0,78,1475	0/0:24,0:24:60.19:0,60,1129	0/0:16,0:16:42.13:0,42,780	0/0:36,0:36:99:0,108,1991	0/0:16,0:16:48.15:0,48,873	0/0:15,0:15:45.15:0,45,864	0/0:30,0:30:87.30:0,87,1671	0/0:16,0:16:48.16:0,48,890	1/1:4,15:19:54.19:1446,54,0	1/1:5,28:36:93.32:2497,93,0	1/1:0,7:8:24.08:648,24,0
chr10	14885324	.	A	AC	17645	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-11.985;DP=682;FS=0.388;HRun=5;HaplotypeScore=64.4475;InbreedingCoeff=0.9920;MQ=85.20;MQ0=0;MQRankSum=-5.403;QD=31.91;ReadPosRankSum=3.211;VQSLOD=5.4564;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,42:48:99:1498,114,0	1/1:1,9:10:27.09:355,27,0	0/0:25,0:25:60.12:0,60,634	0/0:19,0:19:24.65:0,25,402	0/0:18,0:18:51.11:0,51,538	0/0:35,0:35:99:0,99,1061	0/0:31,0:31:72.17:0,72,773	1/1:3,20:23:57.13:690,57,0	1/1:2,17:19:48.16:631,48,0	1/1:1,28:29:81.24:1048,81,0	1/1:3,9:12:30.03:360,30,0	1/1:2,20:22:51.17:671,51,0	1/1:3,25:28:66.21:864,66,0	1/1:4,26:30:72.23:944,72,0	1/1:1,20:21:54.18:711,54,0	1/1:1,25:26:69.22:908,69,0	1/1:1,35:36:87.28:1144,87,0	1/1:3,16:19:42.14:552,42,0	1/1:1,21:22:63.15:782,63,0	1/1:0,14:14:42.14:550,42,0	1/1:7,42:49:99:1421,108,0	1/1:2,22:24:60.19:778,60,0	1/1:4,18:22:39.60:506,40,0	1/1:1,30:31:81.26:1066,81,0	1/1:0,18:18:45.15:592,45,0	1/1:1,24:25:72.23:942,72,0	1/1:2,16:18:36.12:474,36,0	1/1:3,4:7:12.04:158,12,0
chr10	14886407	.	A	AATGGATGGATGG	4127.52	PASS	AB=0.688;AC=21;AF=0.375;AN=56;BaseQRankSum=-4.583;DP=995;FS=1.951;HRun=0;HaplotypeScore=324.5048;InbreedingCoeff=0.5615;MQ=59.02;MQ0=4;MQRankSum=-4.019;QD=8.27;ReadPosRankSum=-3.676;VQSLOD=1.5449;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:23,16:53:24.97:388,0,25	0/0:1,0:10:6.88:0,7,87	0/0:37,0:30:20.36:0,20,386	0/0:34,0:31:29.82:0,30,607	0/0:26,0:26:54.06:0,54,1433	0/0:23,0:23:57.20:0,57,1855	0/0:39,0:39:90.24:0,90,2324	0/0:15,0:33:23.76:0,24,154	0/0:11,0:40:44.42:0,44,678	0/0:16,0:45:55.15:0,55,877	0/1:5,0:17:0.01:0,0,0	1/1:7,23:41:12.04:654,12,0	1/1:17,28:54:15.05:800,15,0	1/1:21,19:51:12.04:696,12,0	0/0:17,0:50:28.54:0,29,77	0/0:16,0:64:16.18:0,16,91	0/0:12,0:29:14.88:0,15,193	0/1:6,0:22:20.94:38,0,21	1/1:12,0:22:4.27:127,4,0	0/1:9,0:31:12.99:81,0,13	0/1:35,0:81:75.38:92,0,75	1/1:7,20:33:5.76:333,6,0	1/1:7,12:29:15.05:503,15,0	1/1:12,16:37:3.01:91,3,0	1/1:7,16:26:9.03:325,9,0	0/0:12,0:31:39.57:0,40,754	0/0:8,0:22:29.99:0,30,488	0/0:5,0:11:15.03:0,15,335
chr10	14887043	.	AAG	A	2463.73	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-3.891;DP=545;FS=6.920;HRun=0;HaplotypeScore=92.5343;InbreedingCoeff=0.9772;MQ=66.34;MQ0=7;MQRankSum=0.952;QD=21.80;ReadPosRankSum=3.794;VQSLOD=3.5273;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:78.05:0,78,834	0/0:7,0:7:21.04:0,21,223	0/0:23,0:13:28.81:0,29,302	0/0:16,0:7:14.27:0,14,92	0/0:32,0:32:68.88:0,69,885	0/0:15,0:15:35.98:0,36,504	0/0:12,0:12:36.01:0,36,470	0/0:27,0:26:57.85:0,58,567	0/0:12,0:12:21.01:0,21,215	0/0:29,0:29:69.09:0,69,750	0/0:17,0:17:42.09:0,42,477	0/0:21,0:21:47.97:0,48,538	0/0:21,0:21:27.60:0,28,372	0/0:10,0:10:9.01:0,9,95	1/1:3,19:22:44.98:534,45,0	1/1:3,13:16:29.96:361,30,0	0/0:24,0:23:45.06:0,45,497	1/1:1,19:19:17.36:325,17,0	1/1:5,19:24:68.84:725,69,0	1/1:3,15:17:41.64:399,42,0	1/1:0,13:13:24.08:307,24,0	0/0:23,0:22:48.06:0,48,513	0/0:22,0:21:35.98:0,36,350	0/0:19,0:18:26.52:0,27,289	0/0:20,0:20:39.08:0,39,411	0/0:24,0:24:54.13:0,54,599	0/0:12,0:12:17.75:0,18,161	0/0:9,0:9:21:0,21,204
chr10	14887044	.	AG	A	1509.92	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-1.622;DP=486;FS=8.699;HRun=1;HaplotypeScore=82.0789;InbreedingCoeff=0.9308;MQ=70.58;MQ0=6;MQRankSum=0.646;QD=13.73;ReadPosRankSum=2.065;VQSLOD=2.3916;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:76.16:0,76,520	0/0:7,0:7:20.81:0,21,150	0/0:23,0:13:27.32:0,27,213	0/0:17,0:8:17.23:0,17,102	0/0:29,0:29:67.02:0,67,690	0/0:14,0:14:40.41:0,40,410	0/0:12,0:12:36:0,36,379	0/0:23,0:22:41.09:0,41,417	0/0:9,0:9:4.84:0,5,143	0/0:25,0:25:50.49:0,50,498	0/0:16,0:16:44.63:0,45,341	0/0:17,0:17:44.39:0,44,361	0/0:15,0:15:23.80:0,24,231	0/0:6,0:6:8.96:0,9,68	1/1:20,1:21:44.34:307,44,0	1/1:13,2:15:29.61:214,30,0	0/0:22,0:21:44.48:0,44,320	1/1:19,1:19:28.79:178,29,0	1/1:20,2:23:68.34:527,68,0	1/1:16,2:17:41.56:317,42,0	1/1:13,0:13:23.65:153,24,0	0/0:19,0:18:47.35:0,47,348	0/0:17,0:17:36.53:0,37,243	0/0:15,0:14:26.23:0,26,195	0/0:16,0:16:40.48:0,40,280	0/0:22,0:22:51.10:0,51,403	0/0:10,0:10:4.37:0,4,85	0/0:8,0:8:20.83:0,21,148
chr10	14887401	.	T	TC	7317.96	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-17.801;DP=830;FS=0.971;HRun=5;HaplotypeScore=80.7881;InbreedingCoeff=0.9991;MQ=83.73;MQ0=0;MQRankSum=-0.958;QD=33.57;ReadPosRankSum=0.927;VQSLOD=5.1614;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,132,1390	0/0:8,0:8:21.05:0,21,226	0/0:23,0:23:60.13:0,60,634	0/0:27,0:27:51.44:0,51,651	0/0:29,0:29:69.17:0,69,741	0/0:24,0:24:57.14:0,57,612	0/0:32,0:32:90.23:0,90,967	0/0:28,0:28:78.19:0,78,832	0/0:34,0:34:96.24:0,96,1031	0/0:34,0:34:99:0,99,1064	0/0:23,0:23:60.15:0,60,645	0/0:40,0:40:99:0,102,1087	0/0:29,0:29:81.19:0,81,862	0/0:38,0:38:99:0,99,1054	1/1:2,26:28:63.20:829,63,0	1/1:3,31:34:61.05:1152,61,0	0/0:29,0:29:84.21:0,84,902	1/1:1,30:31:84.27:1105,84,0	1/1:4,26:30:78.23:996,78,0	1/1:3,19:22:57.19:749,57,0	1/1:6,67:73:99:2486,190,0	0/0:33,0:33:96.24:0,96,1031	0/0:30,0:30:75.15:0,75,789	0/0:21,0:21:60.15:0,60,642	0/0:27,0:27:66.16:0,66,709	0/0:20,0:20:57.14:0,57,612	0/0:22,0:22:63.16:0,63,676	0/0:13,0:13:36.04:0,36,367
chr10	14887611	.	C	CT	2449.02	PASS	AB=0.853;AC=23;AF=0.411;AN=56;BaseQRankSum=-3.855;DP=561;FS=12.857;HRun=12;HaplotypeScore=75.6778;InbreedingCoeff=0.3047;MQ=69.69;MQ0=0;MQRankSum=-2.020;QD=7.77;ReadPosRankSum=-4.055;VQSLOD=0.1048;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,1:29:29.50:0,30,383	0/1:3,10:13:35.76:162,0,36	0/1:8,1:11:8.93:9,0,44	0/0:13,0:15:16.10:0,16,129	0/0:14,0:15:19.67:0,20,136	0/0:13,0:14:31.86:0,32,225	0/0:20,0:20:40.24:0,40,285	0/1:13,23:37:15.18:470,0,15	1/1:2,23:26:33.77:308,34,0	1/1:7,11:18:30.03:282,30,0	1/1:5,11:16:30:282,30,0	0/0:29,0:29:24.77:0,25,194	0/0:13,4:17:17.75:0,18,131	0/0:22,1:24:0.72:0,1,168	0/0:16,0:16:23.78:0,24,175	0/1:22,2:27:6.65:7,0,266	1/1:3,10:13:2.13:183,2,0	0/1:11,1:13:7.27:7,0,99	0/1:18,1:19:9.31:9,0,110	0/0:13,0:13:20.79:0,21,153	0/1:16,1:19:37.36:37,0,205	0/0:19,0:19:20.74:0,21,153	0/1:11,1:13:6.33:6,0,114	0/0:32,3:35:36.32:0,36,430	0/1:16,2:18:35.37:35,0,107	1/1:15,15:30:17.10:315,17,0	1/1:9,19:28:15.43:283,15,0	1/1:4,10:14:8.14:241,8,0
chr10	14887770	.	ATGTGTG	A	7722.10	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-1.337;DP=805;FS=6.870;HRun=0;HaplotypeScore=257.3019;InbreedingCoeff=0.9697;MQ=57.12;MQ0=14;MQRankSum=-9.890;QD=34.94;ReadPosRankSum=-1.822;VQSLOD=3.0850;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:50:80.89:0,81,1019	1/1:2,8:10:18.06:386,18,0	0/0:49,0:26:72.24:0,72,1707	0/0:55,0:26:33.66:0,34,1372	0/0:25,0:26:66.23:0,66,2003	0/0:26,0:26:69.24:0,69,2210	0/0:22,0:22:60.21:0,60,1849	1/1:11,29:37:61.13:1576,61,0	1/1:0,23:23:30.03:585,30,0	1/1:4,29:33:75.23:1497,75,0	1/1:1,24:25:11.44:128,11,0	0/0:31,0:35:26.64:0,27,657	0/0:19,0:20:11.54:0,12,382	0/0:25,0:29:18.51:0,19,527	0/0:30,0:30:75.44:0,75,1889	0/0:22,0:21:55.53:0,56,1172	1/1:4,21:24:6.67:612,7,0	0/0:19,0:19:44.23:0,44,986	0/0:24,0:23:48.15:0,48,816	0/0:20,0:20:45.25:0,45,1109	0/0:50,0:49:99:0,110,2570	0/0:24,0:24:30.86:0,31,444	0/0:21,0:27:40.44:0,40,676	0/0:14,0:21:20.73:0,21,263	0/0:24,0:29:51.09:0,51,873	1/1:2,24:26:69.22:1449,69,0	1/1:1,23:24:48.10:1083,48,0	1/1:7,8:15:18.06:406,18,0
chr10	14887782	.	GT	G	1884.29	PASS	AB=0.878;AC=25;AF=0.446;AN=56;BaseQRankSum=6.416;DP=791;FS=4.877;HRun=2;HaplotypeScore=217.9049;InbreedingCoeff=-0.2057;MQ=48.76;MQ0=23;MQRankSum=-1.542;QD=3.31;ReadPosRankSum=-0.272;VQSLOD=-0.0570;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:38,11:50:99:171,0,116	0/1:8,0:8:1.76:2,0,2	0/0:41,0:18:51.15:0,51,667	0/0:51,0:18:45.77:0,46,625	0/0:25,0:25:69.31:0,69,927	0/0:27,0:27:73.80:0,74,1049	0/0:28,0:27:72.91:0,73,994	0/1:38,0:35:99:143,0,189	0/0:25,0:24:12.37:0,12,74	0/1:30,0:30:31.90:32,0,84	0/0:25,0:25:12.80:0,13,102	0/1:24,11:35:63.49:275,0,63	0/1:10,8:18:22:73,0,22	0/1:21,11:32:89.04:124,0,89	1/1:32,1:32:19.76:176,20,0	1/1:19,1:19:16.07:146,16,0	0/1:25,0:23:27.56:28,0,106	0/1:19,1:19:62.34:62,0,66	0/1:22,0:17:16.73:17,0,58	1/1:19,1:20:4.46:103,4,0	1/1:51,0:48:35.47:165,35,0	0/1:17,11:27:20.45:160,0,20	0/1:18,10:28:93.37:148,0,93	0/1:19,2:18:28.38:28,0,35	0/1:13,12:24:99:124,0,145	0/1:28,0:26:7.39:7,0,145	0/1:27,0:27:24.71:25,0,155	0/1:9,1:10:35.14:47,0,35
chr10	14887783	.	TTG	T	622.54	PASS	AB=0.982;AC=14;AF=0.250;AN=56;BaseQRankSum=5.132;DP=798;FS=25.360;HRun=0;HaplotypeScore=233.7306;InbreedingCoeff=0.0650;MQ=48.00;MQ0=23;MQRankSum=0.761;QD=1.89;ReadPosRankSum=2.455;VQSLOD=1.2975;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:11.70:0,12,237	0/0:8,0:8:9.98:0,10,76	0/0:40,0:17:18.04:0,18,238	0/0:52,0:18:12.09:0,12,207	0/0:25,1:26:27.38:0,27,809	0/0:26,1:27:34.71:0,35,1045	0/1:29,0:28:2.43:2,0,902	0/0:39,0:36:43.13:0,43,574	0/0:25,0:24:25.60:0,26,213	0/0:30,0:30:56.49:0,56,454	0/0:26,0:26:21.01:0,21,228	0/1:34,0:35:39.90:40,0,200	0/1:19,0:19:29.99:30,0,66	0/1:31,0:31:39.16:39,0,148	0/1:30,3:32:21.18:54,0,21	0/1:19,0:18:4.32:96,0,4	0/0:25,0:23:41.49:0,41,331	0/1:14,1:18:65.03:65,0,77	0/1:21,1:17:5.11:51,0,5	1/1:21,0:21:6.26:114,6,0	1/1:48,1:46:21.11:271,21,0	0/1:28,0:27:8.78:9,0,76	0/0:28,0:28:0.45:0,0,183	0/0:21,0:18:0.04:0,0,81	0/1:25,0:24:4.81:5,0,306	0/0:29,0:27:62.28:0,62,540	0/0:27,0:27:59.81:0,60,456	0/0:10,0:10:17.36:0,17,127
chr10	14887795	.	GTGTA	G	1333.27	PASS	AB=0.804;AC=10;AF=0.179;AN=56;BaseQRankSum=7.651;DP=825;FS=0.000;HRun=0;HaplotypeScore=248.5777;InbreedingCoeff=0.0971;MQ=47.14;MQ0=23;MQRankSum=-7.995;QD=4.46;ReadPosRankSum=-0.513;VQSLOD=1.6095;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:43,10:53:43.47:171,0,43	0/0:9,0:9:6.60:0,7,94	0/0:39,0:11:9.56:0,10,164	0/1:49,0:11:1.31:1,0,198	0/0:28,0:28:75.03:0,75,1373	0/0:28,0:28:75.14:0,75,1583	0/0:29,0:29:86.86:0,87,1526	0/0:45,0:41:85.90:0,86,1056	0/0:24,0:23:32.56:0,33,424	0/0:29,0:29:74.56:0,75,802	0/0:26,0:26:30.07:0,30,554	0/1:27,11:38:69.79:308,0,70	1/1:12,8:20:6.65:216,7,0	0/1:24,11:35:25.22:310,0,25	0/0:34,0:33:80.17:0,80,958	0/0:22,0:21:37.62:0,38,492	0/0:22,0:20:48.84:0,49,590	0/0:21,0:20:31.64:0,32,378	0/0:21,0:16:30.59:0,31,193	0/0:22,0:22:18.18:0,18,397	0/0:52,0:49:78.11:0,78,819	0/1:19,10:28:0.30:130,0,0	0/1:16,10:26:59.96:102,0,60	0/1:24,2:23:15.33:42,0,15	0/1:11,12:23:92.87:193,0,93	0/0:30,0:28:69.07:0,69,813	0/0:31,0:31:65.62:0,66,850	0/0:13,0:13:27:0,27,350
chr10	14887799	.	ATGTGTGTG	A	5027.29	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=1.118;DP=811;FS=7.852;HRun=0;HaplotypeScore=271.7975;InbreedingCoeff=0.9859;MQ=47.66;MQ0=22;MQRankSum=-9.553;QD=20.11;ReadPosRankSum=0.092;VQSLOD=3.0091;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:28,25:53:41.42:621,41,0	0/0:8,0:9:17.93:0,18,250	0/0:39,0:11:20.90:0,21,370	0/0:50,0:14:26.36:0,26,428	0/0:23,0:26:69.24:0,69,2280	0/0:27,0:27:72.23:0,72,2456	0/0:29,0:30:84.27:0,84,2530	0/0:46,0:42:81.21:0,81,1836	0/0:20,0:21:35.46:0,35,810	0/0:26,0:26:63.04:0,63,1494	0/0:24,0:25:32.78:0,33,848	1/1:21,15:36:45.14:917,45,0	1/1:9,10:19:36.12:702,36,0	1/1:17,19:36:51.15:966,51,0	0/0:33,0:33:84.27:0,84,2363	0/0:22,0:21:51.01:0,51,1421	0/0:24,0:21:48.07:0,48,1005	0/0:19,0:19:48.12:0,48,1180	0/0:21,0:16:33.06:0,33,722	0/0:19,0:20:51.16:0,51,1378	0/0:48,0:46:93.15:0,93,2517	1/1:17,13:29:20.72:337,21,0	1/1:18,8:26:26.81:435,27,0	1/1:12,13:22:8.63:192,9,0	1/1:25,0:25:51.10:856,51,0	0/0:27,0:27:65.84:0,66,1356	0/0:28,0:30:66.41:0,66,1546	0/0:12,0:12:27.09:0,27,696
chr10	14894087	.	G	GT	6637.83	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-14.365;DP=703;FS=9.485;HRun=6;HaplotypeScore=128.7184;InbreedingCoeff=0.9306;MQ=66.88;MQ0=0;MQRankSum=-1.603;QD=30.87;ReadPosRankSum=-2.217;VQSLOD=2.6099;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:55:99:0,149,813	1/1:1,8:9:24.08:296,24,0	0/0:18,0:17:20.37:0,20,102	0/0:5,0:3:2.84:0,3,14	0/0:11,0:11:0.34:0,0,94	0/0:27,0:27:74.87:0,75,392	0/0:21,0:21:31.65:0,32,236	1/1:4,19:23:55.42:668,55,0	1/1:3,28:31:67.56:818,68,0	1/1:2,31:33:93.15:1134,93,0	1/1:0,11:11:30.57:370,31,0	0/0:36,0:36:94.25:0,94,478	0/0:25,0:25:62.66:0,63,316	0/0:30,0:30:63.91:0,64,322	0/0:27,0:27:74.27:0,74,374	0/0:19,0:19:51.40:0,51,258	1/1:2,37:39:99:1319,108,0	0/0:29,0:29:77.72:0,78,407	0/0:30,0:30:16.14:0,16,252	0/0:18,0:18:37.28:0,37,215	0/0:33,0:33:31.17:0,31,355	0/0:28,0:28:77.47:0,77,410	0/0:15,0:15:43.02:0,43,220	0/0:30,0:30:83.43:0,83,441	0/0:31,0:31:76.88:0,77,383	1/1:3,28:30:84.22:999,84,0	1/1:3,27:30:65.74:811,66,0	1/1:2,6:8:18.06:222,18,0
chr10	14895292	.	G	GGT	606.01	PASS	AC=18;AF=0.391;AN=46;BaseQRankSum=-3.251;DP=131;FS=5.949;HRun=0;HaplotypeScore=39.2994;InbreedingCoeff=0.6950;MQ=94.53;MQ0=3;MQRankSum=-0.799;QD=20.90;ReadPosRankSum=0.961;VQSLOD=3.0877;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:9:13.96:0,14,97	1/1:1,0:1:3:25,3,0	0/0:21,0:13:22.11:0,22,312	0/0:20,0:11:15.57:0,16,123	0/0:4,0:4:9:0,9,94	./.	0/0:6,0:6:17:0,17,163	1/1:5,1:5:9.01:83,9,0	1/1:5,2:7:12.19:200,12,0	1/1:2,0:2:3:32,3,0	1/1:0,3:3:9.03:155,9,0	0/0:2,0:2:1.25:0,1,3	./.	0/0:2,0:2:5.88:0,6,42	0/0:7,0:7:17.99:0,18,153	0/0:9,0:9:17.99:0,18,152	1/1:3,0:3:8.92:77,9,0	0/0:4,0:4:11.99:0,12,101	0/0:4,0:4:11.34:0,11,79	0/0:1,0:1:3:0,3,26	0/0:5,0:5:8.75:0,9,76	./.	./.	0/0:4,0:4:5.97:0,6,47	./.	1/1:2,0:2:6.01:67,6,0	1/1:3,0:3:6.01:77,6,0	1/1:0,1:2:3.01:52,3,0
chr10	14895971	.	CTGTGTGTGTGTGTGTGTG	C	2704.66	PASS	AB=0.920;AC=11;AF=0.204;AN=54;BaseQRankSum=5.897;DP=605;FS=25.041;HRun=0;HaplotypeScore=251.0418;InbreedingCoeff=0.7910;MQ=65.39;MQ0=12;MQRankSum=-4.918;QD=19.89;ReadPosRankSum=1.662;VQSLOD=1.2353;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:39.59:0,40,2170	0/0:10,0:11:18.06:0,18,1037	./.	0/0:25,0:21:3.01:0,3,36	0/0:10,0:12:6.02:0,6,209	0/0:16,0:21:27.09:0,27,1524	0/0:20,0:22:27.09:0,27,1032	0/0:21,0:19:14.26:0,14,330	0/0:13,0:15:18.06:0,18,692	0/0:22,0:22:30.10:0,30,1430	0/0:12,0:15:9.03:0,9,390	0/0:25,0:29:39.13:0,39,2460	0/0:19,0:19:24.55:0,25,1447	0/0:14,0:15:23.58:0,24,1186	1/1:10,16:27:33.11:1313,33,0	1/1:9,8:18:12.04:561,12,0	0/0:28,0:29:45.15:0,45,2326	1/1:14,1:14:11.07:255,11,0	0/1:21,2:22:0.49:280,0,0	1/1:20,2:26:15.05:444,15,0	1/1:27,0:26:2.41:11,2,0	0/0:16,0:16:18.06:0,18,1180	0/0:14,0:14:18.06:0,18,1248	0/0:27,0:44:45.15:0,45,2673	0/0:18,0:18:18.06:0,18,1031	0/0:24,0:25:42.14:0,42,2188	0/0:17,0:19:27.09:0,27,1232	0/0:6,0:6:9.03:0,9,518
chr10	14899072	.	AATCT	A	787.98	PASS	AB=0.948;AC=13;AF=0.232;AN=56;BaseQRankSum=7.256;DP=297;FS=16.692;HRun=0;HaplotypeScore=85.2907;InbreedingCoeff=-0.3559;MQ=48.33;MQ0=1;MQRankSum=-5.917;QD=5.75;ReadPosRankSum=-1.582;VQSLOD=0.6687;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:3.04:0,3,582	0/1:8,0:8:99:134,0,231	0/0:10,0:6:4.77:0,5,218	0/0:3,0:3:9.03:0,9,141	0/1:14,0:14:3.51:4,0,687	0/0:11,0:11:0.06:0,0,518	0/0:4,0:4:12.04:0,12,324	0/0:27,0:24:72.25:0,72,1713	0/0:4,0:4:9.03:0,9,252	0/1:8,3:10:15.97:16,0,518	0/1:10,0:10:44.60:45,0,629	0/1:2,1:3:74.62:83,0,75	0/0:7,0:7:11.54:0,12,412	0/0:8,0:8:20.98:0,21,501	0/1:8,0:8:30.16:35,0,30	0/1:5,0:5:9.05:9,0,67	0/1:29,0:29:49.49:49,0,1717	0/0:29,0:29:14.32:0,14,442	0/0:17,0:17:36.58:0,37,558	0/1:4,0:4:9.65:10,0,121	0/1:6,0:6:53.80:54,0,59	0/0:1,0:1:3.01:0,3,46	0/0:5,0:5:9.03:0,9,198	0/0:2,0:2:3.01:0,3,84	0/0:21,0:21:42.12:0,42,1014	0/1:11,4:15:71.92:72,0,731	0/1:14,0:14:99:208,0,583	0/1:10,0:10:99:213,0,256
chr10	14899076	.	TAGAAAGAG	T	2534.54	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=3.497;DP=331;FS=15.763;HRun=0;HaplotypeScore=108.6325;InbreedingCoeff=0.8506;MQ=47.14;MQ0=3;MQRankSum=-2.607;QD=35.70;ReadPosRankSum=1.479;VQSLOD=2.5340;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:15.75:0,16,522	0/0:9,0:9:24.58:0,25,386	0/0:11,0:6:14.86:0,15,217	0/0:3,0:3:8.96:0,9,205	0/0:14,0:14:42:0,42,944	0/0:11,0:11:30.08:0,30,778	0/0:10,0:10:27:0,27,386	0/0:34,0:28:78.14:0,78,1569	0/0:7,0:7:18.04:0,18,354	0/0:13,0:12:26.25:0,26,629	0/0:13,0:13:33.01:0,33,760	0/0:4,0:4:12.02:0,12,210	0/0:7,0:7:18.05:0,18,477	0/0:8,0:8:24.07:0,24,674	1/1:0,9:9:21.07:572,21,0	1/1:1,4:5:6.02:163,6,0	0/0:31,0:31:45.90:0,46,1347	1/1:5,22:27:18.06:490,18,0	1/1:2,16:18:45.10:1053,45,0	1/1:0,4:4:9:184,9,0	1/1:1,7:8:9.03:245,9,0	0/0:1,0:1:3.01:0,3,109	0/0:4,0:4:6.01:0,6,111	0/0:4,0:4:6:0,6,58	0/0:21,0:21:48.14:0,48,1364	0/0:15,0:15:35.08:0,35,839	0/0:16,0:16:44.73:0,45,825	0/0:10,0:10:29.83:0,30,594
chr10	14899084	.	G	GAGAAAGAAAGAAAGAA	10897.46	PASS	AB=1.000;AC=41;AF=0.732;AN=56;BaseQRankSum=-8.243;DP=379;FS=44.980;HRun=0;HaplotypeScore=149.1652;InbreedingCoeff=0.7626;MQ=47.41;MQ0=2;MQRankSum=0.803;QD=36.94;ReadPosRankSum=-1.670;VQSLOD=2.6264;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:18:24.02:582,24,0	1/1:10,0:10:21.95:543,22,0	0/0:13,0:6:5.52:0,6,53	0/0:4,0:4:9.03:0,9,155	1/1:7,0:23:30.03:871,30,0	1/1:5,0:18:18.06:737,18,0	1/1:9,0:9:21.07:549,21,0	1/1:33,0:28:33.09:950,33,0	1/1:9,0:9:21.05:466,21,0	1/1:12,0:11:11.42:332,11,0	1/1:13,0:13:21.01:357,21,0	1/1:7,0:7:15.03:522,15,0	1/1:5,2:9:3.01:227,3,0	1/1:4,0:12:12.04:515,12,0	0/0:9,0:9:20.43:0,20,445	0/1:4,0:4:1.72:2,0,60	1/1:28,0:28:24.06:519,24,0	0/0:25,0:25:20.59:0,21,404	0/0:17,0:17:35.55:0,36,916	0/0:9,0:9:5.97:0,6,105	0/0:7,0:7:6.64:0,7,75	1/1:0,1:2:3.01:227,3,0	1/1:1,1:8:5.23:234,5,0	1/1:6,0:6:5.97:142,6,0	1/1:12,11:32:21.07:1472,21,0	1/1:15,0:15:12.04:402,12,0	1/1:16,0:16:27.08:725,27,0	1/1:11,0:11:18.06:522,18,0
chr10	14900166	.	TGTGGA	T	12567.79	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=8.510;DP=806;FS=7.893;HRun=0;HaplotypeScore=172.5902;InbreedingCoeff=0.9904;MQ=80.83;MQ0=0;MQRankSum=-9.834;QD=55.12;ReadPosRankSum=-1.350;VQSLOD=4.5892;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:59,0:59:99:0,160,4846	1/1:0,9:9:24.08:498,24,0	0/0:27,0:27:81.14:0,81,2362	0/0:19,0:19:51.29:0,51,1412	0/0:15,0:15:42.14:0,42,1325	0/0:20,0:20:57.18:0,57,1733	0/0:29,0:29:81.28:0,81,2527	1/1:2,33:35:99:2110,102,0	1/1:0,28:28:78.22:1618,78,0	1/1:2,30:32:87.28:1827,87,0	1/1:1,18:19:39.13:773,39,0	0/0:42,0:42:99:0,123,3768	0/0:39,0:39:99:0,117,3582	0/0:34,0:34:99:0,99,3068	0/0:34,0:34:99:0,99,3097	0/0:35,0:35:99:0,105,3282	1/1:7,40:47:48.74:2283,49,0	0/0:30,0:30:87.30:0,87,2752	0/0:18,0:18:51.14:0,51,1471	0/0:15,0:15:39.12:0,39,1126	0/0:66,0:66:99:0,190,5816	0/0:21,0:21:57.18:0,57,1717	0/0:15,0:15:36.12:0,36,1118	0/0:40,0:40:99:0,117,3587	0/0:20,0:20:57.20:0,57,1809	1/1:1,32:33:96.30:1942,96,0	1/1:0,22:22:63.22:1368,63,0	1/1:0,3:3:9:151,9,0
chr10	14901208	.	AGCCAGGG	A	8897.56	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=13.582;DP=530;FS=0.393;HRun=0;HaplotypeScore=129.6653;InbreedingCoeff=0.9745;MQ=85.09;MQ0=0;MQRankSum=-15.576;QD=74.77;ReadPosRankSum=0.240;VQSLOD=4.8657;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,102,4134	1/1:0,1:2:6.02:168,6,0	0/0:14,0:14:42.14:0,42,1583	0/0:25,0:25:72.25:0,72,2651	0/0:12,0:12:36.12:0,36,1483	0/0:20,0:20:60.21:0,60,2369	0/0:30,0:30:90.30:0,90,3467	1/1:1,21:22:66.23:1844,66,0	1/1:0,22:22:60.21:1675,60,0	1/1:0,12:12:36.12:1006,36,0	1/1:0,8:8:18.06:498,18,0	0/0:17,0:17:51.16:0,51,1944	0/0:22,0:22:66.23:0,66,2715	0/0:22,0:22:66.21:0,66,2669	0/0:19,0:19:57.20:0,57,2232	0/0:22,0:22:66.23:0,66,2666	1/1:0,15:15:33.11:922,33,0	0/0:21,0:21:63.22:0,63,2517	0/0:20,0:20:60.19:0,60,2288	0/0:9,0:9:24.08:0,24,1003	0/0:38,0:38:99:0,114,4713	0/0:15,0:15:45.15:0,45,1821	0/0:5,0:5:15.05:0,15,559	0/0:46,0:46:99:0,138,5632	0/0:20,0:20:57.20:0,57,2379	1/1:0,15:15:45.14:1197,45,0	1/1:1,18:19:45.63:1252,46,0	1/1:0,4:4:12.04:335,12,0
chr10	14902022	.	TC	T	15789.21	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=8.514;DP=618;FS=3.277;HRun=4;HaplotypeScore=69.3485;InbreedingCoeff=0.9989;MQ=87.44;MQ0=0;MQRankSum=-5.500;QD=31.96;ReadPosRankSum=5.404;VQSLOD=5.2395;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,47:48:99:1453,123,0	1/1:2,11:13:30.09:358,30,0	0/0:24,0:24:69.14:0,69,873	0/0:27,0:26:72.19:0,72,940	0/0:16,0:16:48.13:0,48,632	0/0:21,0:21:63.20:0,63,862	0/0:36,0:36:99:0,105,1420	1/1:1,24:25:69.11:797,69,0	1/1:0,9:9:24.07:288,24,0	1/1:2,19:21:54.15:637,54,0	1/1:4,9:13:33.97:382,34,0	1/1:0,11:11:30.09:360,30,0	1/1:0,19:19:57.17:683,57,0	1/1:0,16:16:36.11:432,36,0	1/1:0,17:17:45.14:540,45,0	1/1:0,11:11:33.10:396,33,0	1/1:1,50:51:99:1654,138,0	1/1:0,28:28:78.24:935,78,0	1/1:0,10:10:30.05:343,30,0	1/1:0,15:15:45.07:521,45,0	1/1:3,36:39:93.28:1115,93,0	1/1:1,12:13:33.10:396,33,0	1/1:2,16:18:45.14:539,45,0	1/1:0,31:31:81.22:956,81,0	1/1:0,16:16:45.14:540,45,0	1/1:1,30:31:90.26:1065,90,0	1/1:0,26:26:78.24:935,78,0	1/1:0,13:13:39.12:467,39,0
chr10	14906313	.	A	ACCCC	2296.53	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=2.433;DP=587;FS=0.573;HRun=7;HaplotypeScore=96.1146;InbreedingCoeff=0.9705;MQ=84.86;MQ0=0;MQRankSum=-5.740;QD=16.06;ReadPosRankSum=0.349;VQSLOD=-0.1831;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,3:28:21.03:358,21,0	0/0:5,0:5:15.05:0,15,235	0/0:15,0:15:39.03:0,39,546	0/0:21,0:21:25.04:0,25,636	0/0:17,0:17:51.16:0,51,773	0/0:18,0:18:48.16:0,48,750	0/0:35,0:35:96.32:0,96,1484	0/0:27,0:27:66.19:0,66,993	0/0:28,0:28:78.21:0,78,1192	0/0:28,0:28:75.25:0,75,1169	0/0:11,0:11:33.10:0,33,493	1/1:7,11:21:18.06:338,18,0	1/1:11,12:24:18.06:377,18,0	1/1:6,8:16:11.92:149,12,0	0/0:33,0:33:87.25:0,87,1359	0/0:23,0:23:51.13:0,51,798	0/0:24,0:24:66.21:0,66,1032	0/0:25,0:25:72.19:0,72,1099	0/0:15,0:15:30.07:0,30,467	0/0:15,0:15:39.10:0,39,567	0/0:47,0:47:99:0,138,2140	1/1:6,12:18:21.03:393,21,0	1/1:4,3:8:8.48:151,8,0	1/1:4,15:20:22.43:491,22,0	1/1:0,7:8:11.93:242,12,0	0/0:30,0:30:75.19:0,75,1103	0/0:15,0:15:39.11:0,39,602	0/0:12,0:12:27.07:0,27,401
chr10	14906426	.	GC	G	5995.40	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=1.471;DP=697;FS=1.466;HRun=2;HaplotypeScore=84.8373;InbreedingCoeff=0.9972;MQ=83.96;MQ0=0;MQRankSum=-1.347;QD=36.12;ReadPosRankSum=1.221;VQSLOD=5.3434;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,151,2245	1/1:0,11:11:27.09:349,27,0	0/0:20,0:20:60.19:0,60,819	0/0:27,0:27:75.14:0,75,1059	0/0:15,0:15:45.15:0,45,674	0/0:13,0:13:36.12:0,36,540	0/0:30,0:30:90.29:0,90,1326	1/1:2,21:23:60.19:779,60,0	1/1:0,27:27:78.25:1013,78,0	1/1:0,16:16:45.15:584,45,0	1/1:0,14:14:42.14:545,42,0	0/0:33,0:33:96.31:0,96,1418	0/0:44,0:44:99:0,132,1971	0/0:31,0:31:87.29:0,87,1290	0/0:36,0:36:99:0,105,1506	0/0:30,0:30:90.30:0,90,1341	1/1:0,26:26:69.22:896,69,0	0/0:35,0:35:99:0,102,1433	0/0:16,0:16:48.13:0,48,681	0/0:19,0:19:54.17:0,54,782	0/0:50,0:50:99:0,144,2088	0/0:18,0:18:54.18:0,54,808	0/0:17,0:17:48.16:0,48,719	0/0:35,0:35:99:0,99,1483	0/0:10,0:10:30.10:0,30,450	1/1:0,22:22:63.20:816,63,0	1/1:0,22:22:63.20:818,63,0	1/1:0,5:5:15.05:195,15,0
chr10	14907694	.	CA	C	7225.10	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=5.345;DP=641;FS=12.306;HRun=1;HaplotypeScore=73.7893;InbreedingCoeff=0.9948;MQ=74.40;MQ0=0;MQRankSum=-0.720;QD=36.49;ReadPosRankSum=4.418;VQSLOD=4.3566;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,51:51:99:1965,141,0	0/0:4,0:4:12.04:0,12,192	0/0:18,0:18:54.16:0,54,804	0/0:17,0:17:48.14:0,48,692	0/0:25,0:25:75.23:0,75,1161	0/0:19,0:19:57.18:0,57,887	0/0:22,0:22:66.20:0,66,992	0/0:33,0:33:96.25:0,96,1395	0/0:22,0:22:66.22:0,66,1047	0/0:22,0:22:66.22:0,66,1034	0/0:23,0:23:66.21:0,66,1031	1/1:0,27:27:63.21:876,63,0	1/1:0,18:18:48.16:667,48,0	1/1:0,15:15:42.14:585,42,0	0/0:27,0:27:72.22:0,72,1097	0/0:21,0:21:63.19:0,63,960	0/0:31,0:31:93.30:0,93,1445	0/0:20,0:20:60.12:0,60,869	0/0:17,0:17:44.73:0,45,640	0/0:20,0:20:57.19:0,57,903	0/0:35,0:35:99:0,105,1616	1/1:0,18:18:54.18:752,54,0	1/1:0,21:21:57.14:791,57,0	1/1:0,28:27:66.22:921,66,0	1/1:0,20:20:48.16:669,48,0	0/0:30,0:30:90.28:0,90,1376	0/0:23,0:23:69.22:0,69,1072	0/0:14,0:14:42.14:0,42,670
chr10	14907850	.	TA	T	2262.02	PASS	AB=0.955;AC=29;AF=0.518;AN=56;BaseQRankSum=12.037;DP=500;FS=13.458;HRun=2;HaplotypeScore=68.8155;InbreedingCoeff=0.8995;MQ=68.31;MQ0=2;MQRankSum=-0.551;QD=8.77;ReadPosRankSum=-2.248;VQSLOD=-0.5533;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:35,2:38:82.01:461,82,0	0/0:8,0:8:21:0,21,212	0/1:20,1:10:20.11:20,0,83	0/0:12,0:9:6.69:0,7,87	0/0:19,0:19:41.69:0,42,374	0/0:17,0:16:44.02:0,44,406	0/0:19,0:19:41.76:0,42,377	0/0:31,0:31:75.13:0,75,661	0/0:12,0:12:23.61:0,24,177	0/0:22,0:22:40.15:0,40,343	0/0:12,0:12:26.79:0,27,227	1/1:12,1:13:22.86:118,23,0	1/1:6,0:6:14.26:78,14,0	1/1:13,0:14:16.17:77,16,0	1/1:10,1:11:21.98:125,22,0	1/1:16,0:15:13.72:98,14,0	0/0:26,0:26:56.38:0,56,491	1/1:13,0:12:12.99:80,13,0	1/1:12,0:12:24.36:135,24,0	1/1:13,0:13:29.73:169,30,0	1/1:12,0:12:23.59:142,24,0	1/1:0,23:23:41.97:287,42,0	1/1:17,2:20:44.01:240,44,0	1/1:25,2:29:56.99:293,57,0	1/1:12,0:15:29.83:168,30,0	0/0:35,0:35:74.10:0,74,638	0/0:13,0:12:21.05:0,21,260	0/0:15,0:15:13.25:0,13,196
chr10	14907985	.	GGTT	G	2251.75	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=5.987;DP=688;FS=1.496;HRun=0;HaplotypeScore=169.8422;InbreedingCoeff=0.9989;MQ=58.26;MQ0=2;MQRankSum=-7.232;QD=22.08;ReadPosRankSum=0.446;VQSLOD=3.7552;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,108,1931	0/0:10,0:10:27.09:0,27,564	0/0:24,0:22:42.98:0,43,804	0/0:22,0:18:42.03:0,42,662	0/0:34,0:34:84.25:0,84,1655	0/0:20,0:20:57.18:0,57,1099	0/0:33,0:33:93.30:0,93,1890	0/0:31,0:31:75.15:0,75,1225	0/0:32,0:32:93.23:0,93,1704	0/0:24,0:24:63.21:0,63,1260	0/0:15,0:15:39.08:0,39,653	0/0:23,0:23:51.13:0,51,1025	0/0:23,0:23:54.01:0,54,949	0/0:23,0:23:63.14:0,63,1130	1/1:9,4:13:30.02:330,30,0	1/1:7,3:10:23.92:237,24,0	0/0:46,0:46:99:0,117,2255	1/1:10,3:13:27:321,27,0	1/1:12,9:21:51:537,51,0	1/1:13,4:17:35.60:376,36,0	1/1:12,16:28:47.85:638,48,0	0/0:24,0:24:60.13:0,60,1134	0/0:16,0:16:32.85:0,33,448	0/0:43,0:43:99:0,102,1804	0/0:28,0:28:75.08:0,75,1363	0/0:26,0:26:66.16:0,66,1075	0/0:28,0:28:81.26:0,81,1659	0/0:16,0:16:45.13:0,45,857
chr10	14907995	.	G	GTCTT	2544	PASS	AB=0.789;AC=8;AF=0.143;AN=56;BaseQRankSum=12.271;DP=698;FS=8.863;HRun=0;HaplotypeScore=191.4157;InbreedingCoeff=-0.1292;MQ=62.59;MQ0=0;MQRankSum=-13.119;QD=19.27;ReadPosRankSum=-3.631;VQSLOD=1.9885;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:44.19:0,44,1376	0/0:9,0:9:27.09:0,27,539	0/0:31,0:30:78.03:0,78,1401	0/0:20,0:18:48.12:0,48,896	0/0:30,0:30:90.30:0,90,1754	0/0:22,0:22:66.21:0,66,1265	0/0:42,0:42:99:0,123,2330	0/0:36,0:36:96.29:0,96,1849	0/0:31,0:31:93.32:0,93,1830	0/0:30,0:30:87.30:0,87,1704	0/0:15,0:15:42.14:0,42,837	0/0:20,0:20:25.94:0,26,645	0/1:24,0:24:29.97:30,0,667	0/0:26,0:26:1.37:0,1,759	0/1:6,6:12:8.46:504,0,8	0/1:3,6:9:13.78:402,0,14	0/0:49,0:49:99:0,135,2650	0/1:11,1:13:58.07:266,0,58	0/1:13,8:20:99:574,0,145	0/1:5,9:14:15.49:540,0,15	0/1:18,4:22:99:294,0,111	0/0:22,0:22:26.02:0,26,782	0/1:17,0:17:69.54:70,0,218	0/0:40,0:40:53.42:0,53,1320	0/0:26,0:26:36.98:0,37,917	0/0:26,0:26:78.26:0,78,1508	0/0:32,0:32:90.27:0,90,1714	0/0:16,0:16:48.11:0,48,906
chr10	14907998	.	GT	G	142.19	PASS	AB=0.732;AC=6;AF=0.107;AN=56;BaseQRankSum=9.790;DP=685;FS=5.865;HRun=2;HaplotypeScore=158.9611;InbreedingCoeff=0.1058;MQ=61.52;MQ0=0;MQRankSum=-7.953;QD=1.47;ReadPosRankSum=2.886;VQSLOD=-0.5350;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:97.83:0,98,1570	0/0:9,0:9:27.09:0,27,431	0/0:31,0:30:83.78:0,84,1199	0/0:18,0:17:42.13:0,42,646	0/0:31,0:31:90.31:0,90,1427	0/0:21,0:21:63.21:0,63,996	0/0:43,0:43:99:0,129,2001	0/0:36,0:36:99:0,105,1597	0/0:31,0:31:93.32:0,93,1482	0/0:30,0:30:90.26:0,90,1392	0/0:14,0:14:42.14:0,42,671	0/0:20,0:20:54.13:0,54,813	0/0:20,0:20:57.01:0,57,775	0/0:23,0:23:65.93:0,66,939	0/1:6,6:12:4.42:43,0,4	0/1:5,6:11:7.87:58,0,8	0/0:47,0:47:99:0,141,2230	0/1:11,2:13:17.08:17,0,92	0/1:16,8:23:98.90:99,0,165	0/1:5,9:14:3.79:36,0,4	0/1:19,4:23:12.32:12,0,29	0/0:21,0:21:61.75:0,62,899	0/0:16,0:16:38.93:0,39,451	0/0:38,0:38:99:0,99,1390	0/0:24,0:24:70.48:0,70,1070	0/0:27,0:27:81.28:0,81,1282	0/0:32,0:32:96.32:0,96,1498	0/0:16,0:16:48.16:0,48,743
chr10	14908001	.	T	TTTTGC	16677.82	PASS	AB=0.714;AC=27;AF=0.482;AN=56;BaseQRankSum=3.189;DP=748;FS=8.757;HRun=0;HaplotypeScore=178.3238;InbreedingCoeff=0.9302;MQ=60.91;MQ0=0;MQRankSum=-14.700;QD=46.46;ReadPosRankSum=0.514;VQSLOD=4.0122;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,28:46:78.27:2189,78,0	0/0:9,0:9:18.06:0,18,345	0/0:30,0:28:57.15:0,57,959	0/0:17,0:16:24.08:0,24,413	0/0:31,0:31:75.26:0,75,1437	0/0:22,0:22:54.15:0,54,980	0/0:42,0:42:93.30:0,93,1732	0/0:36,0:36:63.17:0,63,1177	0/0:32,0:32:72.22:0,72,1317	0/0:30,0:30:81.27:0,81,1500	0/0:15,0:15:42.14:0,42,777	1/1:6,18:25:60.21:1668,60,0	1/1:10,13:25:45.15:1228,45,0	1/1:11,13:26:48.16:1355,48,0	1/1:10,0:20:45.14:845,45,0	0/1:9,0:15:13.04:592,0,13	0/0:49,0:49:99:0,129,2410	1/1:13,0:18:35.86:578,36,0	1/1:24,0:31:60.17:1102,60,0	1/1:6,0:15:27.02:545,27,0	1/1:23,0:28:30.09:523,30,0	1/1:7,15:22:48.16:1335,48,0	1/1:5,12:17:41.51:1111,42,0	1/1:15,27:44:66.23:1889,66,0	1/1:6,19:26:60.21:1718,60,0	0/0:28,0:28:78.26:0,78,1467	0/0:32,0:32:78.27:0,78,1495	0/0:16,0:16:33.11:0,33,593
chr10	14908579	.	G	GCGCACACACACA	9006.97	PASS	AB=0.793;AC=38;AF=0.679;AN=56;BaseQRankSum=2.850;DP=690;FS=2.761;HRun=0;HaplotypeScore=173.8786;InbreedingCoeff=0.3318;MQ=57.19;MQ0=6;MQRankSum=-6.530;QD=16.32;ReadPosRankSum=-0.191;VQSLOD=3.9025;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:54,0:53:54.93:954,55,0	1/1:13,0:13:17.89:239,18,0	0/0:27,0:14:39.05:0,39,389	0/0:22,0:14:14.78:0,15,263	0/0:16,0:18:44.67:0,45,1205	0/0:11,0:13:32.93:0,33,518	0/0:33,0:37:90.14:0,90,2212	1/1:29,0:29:81.44:1166,81,0	1/1:1,0:31:18.06:718,18,0	1/1:26,0:26:53.47:996,53,0	1/1:1,0:10:8.86:265,9,0	1/1:5,19:36:2.38:180,2,0	1/1:1,14:22:9.03:556,9,0	1/1:2,13:26:6.02:364,6,0	0/1:6,0:24:55.63:411,0,56	0/1:5,0:21:99:121,0,105	1/1:0,0:30:9.03:338,9,0	0/1:8,0:20:99:230,0,137	0/1:19,0:17:99:513,0,148	0/1:13,0:13:68.69:69,0,124	0/1:42,0:39:48.18:48,0,204	0/0:4,10:19:3:0,3,25	1/1:1,0:15:2.50:99,2,0	1/1:2,28:50:2.92:177,3,0	1/1:1,11:23:3.01:184,3,0	1/1:0,0:27:49.23:895,49,0	1/1:2,0:17:9.03:380,9,0	1/1:3,0:3:8.98:107,9,0
chr10	14909978	.	TG	T	7625.06	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=15.277;DP=735;FS=1.675;HRun=4;HaplotypeScore=77.0739;InbreedingCoeff=0.9999;MQ=81.55;MQ0=0;MQRankSum=-1.410;QD=33.01;ReadPosRankSum=5.128;VQSLOD=5.2407;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,39:40:99:1401,117,0	0/0:13,0:13:39.13:0,39,546	0/0:21,0:21:49.44:0,49,666	0/0:20,0:20:41.30:0,41,507	0/0:24,0:24:69.22:0,69,949	0/0:24,0:24:66.22:0,66,924	0/0:32,0:32:90.30:0,90,1257	0/0:25,0:25:69.21:0,69,936	0/0:36,0:36:99:0,102,1424	0/0:25,0:25:75.25:0,75,1047	0/0:14,0:14:42.11:0,42,553	1/1:0,33:33:96.29:1151,96,0	1/1:1,22:23:63.19:756,63,0	1/1:0,31:31:84.26:1007,84,0	0/0:25,0:25:75.24:0,75,1033	0/0:36,0:36:99:0,108,1472	0/0:40,0:40:99:0,120,1660	0/0:25,0:25:75.24:0,75,1033	0/0:21,0:21:60.20:0,60,839	0/0:12,0:12:36.11:0,36,485	0/0:45,0:45:99:0,135,1846	1/1:1,28:29:72.22:864,72,0	1/1:1,16:17:45.14:540,45,0	1/1:1,40:41:99:1368,114,0	1/1:3,14:17:45.14:539,45,0	0/0:32,0:32:96.31:0,96,1328	0/0:21,0:21:51.13:0,51,692	0/0:13,0:13:39.11:0,39,528
chr10	14915000	.	TCATACATA	T	7039.24	PASS	AB=0.690;AC=31;AF=0.596;AN=52;BaseQRankSum=6.217;DP=704;FS=1.554;HRun=0;HaplotypeScore=184.6167;InbreedingCoeff=0.8443;MQ=60.52;MQ0=6;MQRankSum=-10.072;QD=18.00;ReadPosRankSum=0.126;VQSLOD=4.4082;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:48:63.19:0,63,2079	1/1:3,4:7:9:224,9,0	./.	./.	0/0:37,0:37:74.99:0,75,2854	0/0:18,0:18:27.09:0,27,1105	0/0:24,0:24:30.10:0,30,1020	1/1:29,0:28:5.91:45,6,0	1/1:12,21:33:39.13:973,39,0	1/1:14,18:32:51.07:1042,51,0	1/1:3,14:17:14.97:316,15,0	0/0:18,0:18:30.03:0,30,954	0/0:12,0:24:17.98:0,18,191	0/1:16,1:29:46.62:47,0,313	1/1:18,19:37:45.15:1123,45,0	1/1:4,12:16:21.07:524,21,0	1/1:17,7:24:6.02:150,6,0	1/1:19,7:25:12.04:299,12,0	1/1:17,6:23:18.05:401,18,0	1/1:12,9:21:17.88:280,18,0	1/1:26,0:25:9.47:120,9,0	0/0:23,0:23:45.12:0,45,1465	0/0:9,0:21:24.43:0,24,217	0/0:10,0:21:32.94:0,33,367	0/0:26,0:26:42.14:0,42,1638	1/1:19,17:36:45.04:914,45,0	1/1:10,13:23:23.91:431,24,0	1/1:6,6:12:6.02:150,6,0
chr10	14915259	.	T	TAC	805.34	PASS	AB=0.876;AC=24;AF=0.500;AN=48;BaseQRankSum=-2.562;DP=538;FS=6.860;HRun=0;HaplotypeScore=94.3421;InbreedingCoeff=0.2447;MQ=65.11;MQ0=9;MQRankSum=1.244;QD=2.43;ReadPosRankSum=0.931;VQSLOD=0.6838;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:48,0:48:20.52:217,21,0	0/0:3,0:5:2.84:0,3,14	./.	./.	0/0:6,0:6:1.55:0,2,4	0/0:12,0:12:2.99:0,3,23	0/0:26,0:27:8.68:0,9,78	./.	0/0:21,0:24:5.54:0,6,28	0/1:16,0:15:0:0,0,0	0/1:10,0:11:2.75:18,0,3	1/1:24,0:24:9.01:109,9,0	1/1:12,0:13:9.03:128,9,0	1/1:18,0:18:2.98:21,3,0	1/1:9,5:15:6.02:88,6,0	1/1:13,6:20:6.02:88,6,0	0/0:12,0:13:2.84:0,3,14	1/1:17,6:26:6.96:90,7,0	./.	0/0:9,0:9:3:0,3,32	0/1:32,7:39:18.19:38,0,18	1/1:22,0:21:2.97:20,3,0	0/1:4,1:5:23.23:47,0,23	0/1:26,6:34:8.07:38,0,8	0/1:14,4:19:25.97:38,0,26	1/1:19,0:18:2.97:10,3,0	0/0:15,0:20:10.95:0,11,55	0/0:9,0:10:2.84:0,3,14
chr10	14917120	.	A	AC	4893.53	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-13.666;DP=587;FS=0.365;HRun=7;HaplotypeScore=74.4292;InbreedingCoeff=0.9965;MQ=77.77;MQ0=0;MQRankSum=-1.876;QD=27.34;ReadPosRankSum=2.320;VQSLOD=5.5576;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,47:50:99:1413,117,0	0/0:14,0:14:42.07:0,42,405	0/0:18,0:18:32.75:0,33,300	0/0:14,0:14:25.85:0,26,216	0/0:9,0:9:24.04:0,24,232	0/0:18,0:18:45.05:0,45,428	0/0:29,0:29:75.11:0,75,723	0/0:25,0:25:54.07:0,54,522	0/0:24,0:24:63.09:0,63,603	0/0:16,0:16:48.07:0,48,459	0/0:13,0:13:30.04:0,30,289	1/1:1,19:20:51.16:616,51,0	1/1:3,19:23:54.02:622,54,0	1/1:1,18:20:45.14:544,45,0	0/0:16,0:16:42.06:0,42,405	0/0:12,0:12:36.06:0,36,348	0/0:40,0:41:99:0,110,1025	0/0:41,0:41:99:0,120,1144	0/0:14,0:14:24.02:0,24,225	0/0:16,0:16:36.05:0,36,347	0/0:42,0:42:99:0,120,1158	1/1:2,17:19:45.14:540,45,0	1/1:3,11:14:21.06:253,21,0	1/1:0,18:18:51.16:616,51,0	1/1:1,14:15:23.92:290,24,0	0/0:18,0:18:45.07:0,45,434	0/0:22,0:22:51.08:0,51,492	0/0:6,0:6:18.03:0,18,174
chr10	14918454	.	A	AAT	1067.92	PASS	AB=0.977;AC=36;AF=0.692;AN=52;BaseQRankSum=3.985;DP=316;FS=0.755;HRun=0;HaplotypeScore=87.8520;InbreedingCoeff=0.4218;MQ=52.13;MQ0=45;MQRankSum=-3.601;QD=5.37;ReadPosRankSum=0.170;VQSLOD=2.7567;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:18,0:12:7.52:43,0,8	1/1:2,2:4:5.23:54,5,0	0/0:33,0:6:11.94:0,12,80	0/0:22,0:7:4.72:0,5,66	0/0:21,0:18:47.86:0,48,528	0/0:13,0:11:23.92:0,24,276	0/0:22,0:17:44.60:0,45,469	0/1:16,0:12:4.30:4,0,65	1/1:6,2:8:12.31:113,12,0	1/1:10,2:12:26.05:174,26,0	0/1:9,1:10:10.90:49,0,11	1/1:3,0:3:3.50:11,3,0	1/1:8,0:7:18.08:81,18,0	1/1:2,0:1:2.99:23,3,0	1/1:7,0:4:8.94:48,9,0	1/1:2,0:2:4.72:17,5,0	1/1:30,4:29:18.13:198,18,0	1/1:8,0:5:5.75:17,6,0	0/0:6,0:4:0:0,0,1	1/1:3,0:3:2.96:32,3,0	./.	1/1:6,0:5:5.40:25,5,0	./.	1/1:7,0:2:1.82:5,2,0	1/1:6,0:5:5.37:30,5,0	1/1:14,3:13:7.83:194,8,0	1/1:15,1:15:3.76:105,4,0	0/1:11,0:7:3.30:3,0,26
chr10	14918458	.	AAAAT	A	3110.47	PASS	AB=0.571;AC=17;AF=0.315;AN=54;BaseQRankSum=4.398;DP=325;FS=9.059;HRun=0;HaplotypeScore=57.4567;InbreedingCoeff=0.7727;MQ=52.92;MQ0=42;MQRankSum=-1.182;QD=24.88;ReadPosRankSum=3.415;VQSLOD=2.2050;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:14:41.22:0,41,257	1/1:2,2:4:9.03:123,9,0	0/0:33,0:6:8.25:0,8,131	0/0:22,0:7:11.77:0,12,165	0/0:22,0:19:44.45:0,44,824	0/0:13,0:11:20.96:0,21,434	0/0:22,0:17:46.75:0,47,635	0/1:4,12:12:31.26:317,0,31	1/1:2,6:8:15.04:197,15,0	1/1:2,11:13:39.07:519,39,0	1/1:1,9:10:30:393,30,0	0/0:4,0:4:8.84:0,9,54	0/0:10,0:9:26.59:0,27,171	0/0:3,0:3:5.98:0,6,47	0/0:8,0:5:14.74:0,15,94	0/0:2,0:2:5.91:0,6,37	1/1:9,23:28:51.11:711,51,0	0/0:10,0:7:17.84:0,18,123	0/0:8,0:6:14.97:0,15,121	0/0:3,0:3:8.88:0,9,59	0/0:1,0:1:2.99:0,3,23	0/0:6,0:5:11.72:0,12,68	./.	0/0:7,0:3:5.87:0,6,34	0/0:6,0:5:14.74:0,15,94	1/1:9,7:12:32.99:379,33,0	1/1:7,9:15:35.98:497,36,0	1/1:4,6:7:12.04:170,12,0
chr10	14918721	.	CTT	C	3150.02	PASS	AB=0.610;AC=32;AF=0.571;AN=56;BaseQRankSum=-2.167;DP=372;FS=0.500;HRun=13;HaplotypeScore=72.5084;InbreedingCoeff=0.7846;MQ=54.10;MQ0=16;MQRankSum=-2.006;QD=14.25;ReadPosRankSum=0.228;VQSLOD=2.5339;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:4,0:11:5.60:6,0,25	1/1:0,2:2:6.01:58,6,0	0/0:14,0:8:20.01:0,20,148	0/0:22,0:9:14.71:0,15,123	0/0:13,0:13:27.09:0,27,387	0/0:19,0:16:33.10:0,33,452	0/0:9,0:7:21.03:0,21,280	1/1:10,18:16:35.99:398,36,0	1/1:3,3:5:9.01:87,9,0	1/1:5,8:15:13.12:238,13,0	1/1:4,9:11:24.03:233,24,0	0/0:7,0:12:14.97:0,15,51	0/0:4,0:8:12.95:0,13,54	0/0:2,0:11:17.34:0,17,60	1/1:2,19:20:39.03:378,39,0	1/1:3,7:10:15.01:145,15,0	1/1:2,7:9:6.01:58,6,0	1/1:2,10:11:24.04:233,24,0	1/1:3,15:16:36.55:395,37,0	1/1:2,6:8:18.01:174,18,0	1/1:2,5:7:2.93:79,3,0	0/0:1,0:8:17.47:0,17,60	0/0:6,0:11:18.48:0,18,111	0/1:4,2:5:18.26:18,0,18	0/0:1,1:14:29.82:0,30,103	1/1:4,8:10:21.01:204,21,0	1/1:1,18:18:54.09:523,54,0	1/1:7,7:11:10.17:138,10,0
chr10	14918753	.	TG	T	874.69	PASS	AB=0.978;AC=21;AF=0.375;AN=56;BaseQRankSum=6.376;DP=435;FS=2.213;HRun=1;HaplotypeScore=102.7909;InbreedingCoeff=0.1649;MQ=57.90;MQ0=19;MQRankSum=-6.117;QD=3.54;ReadPosRankSum=0.772;VQSLOD=0.2512;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:11:11.87:59,12,0	0/0:5,0:2:6.02:0,6,71	0/0:36,1:16:14.88:0,15,167	0/1:33,3:16:29.63:50,0,30	0/0:17,0:16:34.14:0,34,541	0/0:19,0:14:35.88:0,36,379	0/0:8,0:7:17.16:0,17,172	0/0:16,0:15:38.95:0,39,396	0/0:6,1:4:9.02:0,9,97	0/0:12,0:9:11.60:0,12,240	0/0:15,1:12:25.31:0,25,267	0/1:11,0:8:17.27:17,0,38	0/1:8,1:7:15.86:47,0,16	0/1:12,0:9:3.14:45,0,3	1/1:22,0:17:21.59:146,22,0	0/1:8,0:4:11.32:35,0,11	0/1:12,1:8:3.86:4,0,56	0/1:11,0:9:5.17:45,0,5	0/1:13,0:10:27.28:61,0,27	1/1:16,0:15:9.32:147,9,0	0/0:9,1:5:0.93:0,1,20	1/1:17,2:14:1.81:142,2,0	0/1:19,0:17:1.89:92,0,2	1/1:9,0:6:11.51:55,12,0	0/1:22,0:19:48.03:85,0,48	0/0:21,0:17:17.14:0,17,396	0/0:19,0:17:37.19:0,37,467	0/1:10,0:8:17.74:18,0,60
chr10	14918754	.	GT	G	1951.85	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=4.372;DP=437;FS=4.002;HRun=7;HaplotypeScore=100.9301;InbreedingCoeff=0.8091;MQ=56.28;MQ0=21;MQRankSum=-3.833;QD=8.27;ReadPosRankSum=0.884;VQSLOD=1.1574;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:10,6:11:17.13:136,17,0	0/0:4,0:2:6.01:0,6,60	0/0:36,1:15:15.62:0,16,139	0/1:38,0:16:10.98:11,0,36	0/0:17,0:16:47.18:0,47,567	0/0:19,0:13:30.09:0,30,372	0/0:9,0:8:18.05:0,18,207	0/0:15,0:14:23.96:0,24,229	0/0:6,0:4:9:0,9,81	0/0:12,0:9:19.82:0,20,169	0/0:16,0:12:26.91:0,27,235	1/1:7,4:8:13.83:104,14,0	1/1:8,1:7:14.43:87,14,0	1/1:10,2:9:6.36:73,6,0	1/1:9,13:18:39.07:381,39,0	1/1:5,3:4:9.01:86,9,0	0/0:12,0:8:6.22:0,6,67	1/1:7,4:9:15.62:106,16,0	1/1:9,5:11:12.01:170,12,0	1/1:10,6:15:29.84:254,30,0	1/1:8,1:4:5.94:40,6,0	1/1:16,4:15:15.81:144,16,0	1/1:12,5:16:25.83:232,26,0	1/1:9,1:7:6.35:76,6,0	1/1:15,7:19:32.85:266,33,0	0/0:20,0:16:31.14:0,31,306	0/0:19,0:17:39.86:0,40,376	0/0:10,0:8:4.11:0,4,71
chr10	14918755	.	T	TTTTTTG	4861.35	PASS	AB=1.000;AC=30;AF=0.536;AN=56;BaseQRankSum=1.464;DP=433;FS=1.077;HRun=0;HaplotypeScore=121.0524;InbreedingCoeff=0.7736;MQ=53.73;MQ0=22;MQRankSum=-3.996;QD=19.60;ReadPosRankSum=1.291;VQSLOD=4.1406;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:15,1:11:18.02:323,18,0	0/0:5,0:2:6.02:0,6,80	0/0:35,0:14:15.09:0,15,163	0/1:37,0:15:15.42:15,0,29	0/0:17,0:16:47.19:0,47,947	0/0:19,0:13:30.10:0,30,615	0/0:9,0:8:18.05:0,18,328	0/0:14,0:13:24.07:0,24,360	0/0:7,0:4:9.03:0,9,141	0/0:12,0:9:21.03:0,21,272	0/0:16,0:12:26.95:0,27,346	1/1:8,2:7:15.05:352,15,0	1/1:9,0:7:11.36:116,11,0	1/1:10,2:9:6.27:268,6,0	1/1:22,0:17:37.36:615,37,0	1/1:8,0:4:8.24:126,8,0	0/1:13,0:8:15.19:15,0,99	1/1:11,0:9:14.78:256,15,0	1/1:14,0:11:16.73:301,17,0	1/1:16,0:15:33.04:554,33,0	1/1:9,0:4:6.46:69,6,0	1/1:19,1:15:16.63:391,17,0	1/1:17,2:16:36.47:632,36,0	1/1:9,1:7:14.73:164,15,0	1/1:19,3:19:27.91:666,28,0	0/0:21,0:16:36.98:0,37,557	0/0:19,0:17:44.56:0,45,560	0/0:10,0:8:8.84:0,9,105
chr10	14918759	.	TTTG	T	1948.99	PASS	AB=0.955;AC=31;AF=0.554;AN=56;BaseQRankSum=2.508;DP=434;FS=6.630;HRun=0;HaplotypeScore=102.5680;InbreedingCoeff=0.0649;MQ=51.01;MQ0=33;MQRankSum=-4.679;QD=5.43;ReadPosRankSum=-1.635;VQSLOD=1.8031;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:11:11.02:188,11,0	0/0:7,0:2:6:0,6,52	0/1:33,0:11:21.45:21,0,103	0/1:38,0:14:6.70:45,0,7	0/0:18,0:16:47.84:0,48,801	0/0:18,0:12:30.10:0,30,580	0/0:9,0:8:20.94:0,21,298	0/1:14,1:12:15.02:15,0,145	0/0:7,0:4:8.99:0,9,74	0/1:11,2:9:11.47:11,0,134	0/0:16,0:12:26.69:0,27,205	1/1:9,0:6:0.98:73,1,0	1/1:9,0:6:17.21:177,17,0	0/1:12,0:9:7.16:90,0,7	1/1:20,0:15:18.53:104,19,0	0/1:8,0:4:9.18:13,0,9	0/1:13,1:8:38.51:41,0,39	0/1:10,0:8:1.06:28,0,1	1/1:14,0:9:2.58:49,3,0	1/1:15,0:14:24.42:130,24,0	1/1:10,0:5:8.54:24,9,0	0/1:17,0:14:16.28:244,0,16	1/1:19,1:18:26.60:315,27,0	1/1:9,0:8:9.08:73,9,0	0/1:20,0:17:1.98:315,0,2	0/1:17,4:16:99:100,0,240	0/1:19,1:17:9.17:9,0,262	0/1:7,1:6:21.79:59,0,22
chr10	14918760	.	TTG	T	1697.43	PASS	AB=1.000;AC=34;AF=0.607;AN=56;BaseQRankSum=4.103;DP=432;FS=0.519;HRun=0;HaplotypeScore=98.2487;InbreedingCoeff=0.3956;MQ=50.94;MQ0=34;MQRankSum=-5.577;QD=5.24;ReadPosRankSum=-0.539;VQSLOD=2.4612;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:16,1:11:17.66:152,18,0	0/0:7,0:2:5.73:0,6,35	0/1:31,0:10:21.47:21,0,91	0/1:37,0:14:22.07:31,0,22	0/0:18,0:16:44.31:0,44,627	0/0:18,0:12:30.10:0,30,461	0/0:9,0:8:20.93:0,21,246	0/1:15,0:11:16.14:16,0,81	0/0:7,0:4:8.23:0,8,36	0/0:12,0:8:0.13:0,0,81	0/0:16,0:12:25.01:0,25,133	1/1:9,0:6:8.39:42,8,0	1/1:9,1:6:17.18:133,17,0	1/1:12,0:9:10.89:65,11,0	1/1:19,1:15:35.06:163,35,0	1/1:7,0:3:3.99:20,4,0	0/1:14,0:8:13.59:23,0,14	1/1:10,0:8:6.53:74,7,0	1/1:14,0:9:14.16:68,14,0	1/1:15,0:14:27.97:150,28,0	1/1:10,0:5:8.77:38,9,0	1/1:18,1:14:3.24:230,3,0	1/1:19,2:18:32.07:235,32,0	1/1:10,1:8:12.46:66,12,0	1/1:20,1:17:35.40:266,35,0	0/1:21,0:16:54.62:55,0,120	0/0:21,0:18:7.65:0,8,153	0/1:8,0:6:13.23:37,0,13
chr10	14918761	.	TG	T	1894.09	PASS	AB=0.979;AC=39;AF=0.696;AN=56;BaseQRankSum=7.125;DP=427;FS=2.096;HRun=1;HaplotypeScore=91.2307;InbreedingCoeff=0.3679;MQ=49.34;MQ0=36;MQRankSum=-7.718;QD=5.28;ReadPosRankSum=2.295;VQSLOD=0.6974;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:11:20.59:135,21,0	0/0:7,0:2:2.71:0,3,22	0/1:30,1:10:21.54:22,0,79	0/1:32,5:12:16.21:18,0,16	0/0:18,0:16:43.93:0,44,478	0/0:18,0:12:30.04:0,30,345	0/0:9,0:8:20.75:0,21,176	0/1:13,0:10:28.47:28,0,33	0/1:7,0:4:0:1,0,0	0/1:12,0:8:26.17:26,0,29	0/0:16,0:12:7.64:0,8,52	1/1:9,0:6:13.33:63,13,0	1/1:9,1:6:17.03:106,17,0	1/1:10,0:7:17.10:88,17,0	1/1:20,0:15:35.23:156,35,0	1/1:7,0:3:8.42:42,8,0	1/1:13,1:8:5.02:29,5,0	1/1:8,2:8:16.96:131,17,0	1/1:15,0:9:21.06:98,21,0	1/1:13,2:14:30.39:156,30,0	1/1:9,1:5:10.01:91,10,0	1/1:19,0:14:18.59:191,19,0	1/1:21,0:18:41.54:237,42,0	1/1:11,0:8:12.83:67,13,0	1/1:21,0:17:45.53:263,46,0	0/1:21,0:16:17.41:67,0,17	0/1:20,0:17:11.16:11,0,45	1/1:7,0:5:5.81:46,6,0
chr10	14918762	.	G	GGT	2630.33	PASS	AB=0.845;AC=20;AF=0.357;AN=56;BaseQRankSum=-1.505;DP=438;FS=5.987;HRun=0;HaplotypeScore=98.8039;InbreedingCoeff=0.3201;MQ=47.26;MQ0=42;MQRankSum=-2.276;QD=13.99;ReadPosRankSum=1.456;VQSLOD=3.0534;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:12:5.21:0,5,67	1/1:4,2:2:6:84,6,0	0/0:28,0:9:11.75:0,12,122	0/0:33,0:11:5.93:0,6,29	0/0:22,0:19:48.06:0,48,675	0/0:18,0:12:30.10:0,30,477	0/0:9,0:8:21.04:0,21,282	0/1:11,4:10:7.99:301,0,8	1/1:2,4:4:9.03:180,9,0	1/1:11,3:9:23.97:320,24,0	1/1:7,9:12:1.01:362,1,0	0/1:6,0:5:7.60:8,0,19	0/1:10,0:6:1.69:2,0,37	0/1:8,0:7:11.82:12,0,39	0/0:20,0:15:34.72:0,35,166	0/0:7,0:3:6.56:0,7,31	0/1:12,2:9:2.23:131,0,2	0/0:11,0:9:19.74:0,20,108	0/0:16,0:9:19.29:0,19,98	0/0:15,0:14:29.22:0,29,148	0/0:12,0:6:8.02:0,8,29	0/0:17,0:14:9.91:0,10,120	0/1:18,0:18:17.46:17,0,93	0/1:10,0:8:20.93:21,0,29	0/0:18,0:17:4.28:0,4,145	1/1:8,12:16:24.85:667,25,0	1/1:8,12:17:41.29:643,41,0	0/1:7,3:6:23.10:59,0,23
chr10	14918779	.	T	TGG	393.79	PASS	AB=0.952;AC=14;AF=0.250;AN=56;BaseQRankSum=4.644;DP=456;FS=42.852;HRun=0;HaplotypeScore=88.2251;InbreedingCoeff=-0.0874;MQ=27.15;MQ0=84;MQRankSum=-3.139;QD=2.08;ReadPosRankSum=1.564;VQSLOD=-0.3126;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:14:47.45:47,0,56	0/0:8,0:1:3:0,3,28	0/0:20,0:2:6.02:0,6,81	0/0:23,0:4:3:0,3,20	0/0:24,0:18:47.20:0,47,598	0/0:18,0:10:27.07:0,27,391	0/0:10,0:6:14.15:0,14,149	0/0:13,0:6:12.04:0,12,172	0/0:11,0:5:11.75:0,12,94	0/0:20,0:10:26.10:0,26,288	0/0:12,0:8:14.77:0,15,143	0/1:9,0:4:8.95:11,0,9	0/1:13,0:5:56.06:72,0,56	0/1:9,0:7:12.82:13,0,43	0/1:20,4:15:23.98:24,0,91	1/1:4,1:2:2.16:21,2,0	0/0:23,0:10:20.97:0,21,228	0/1:14,1:8:15.60:16,0,80	1/1:16,0:5:2.55:39,3,0	0/1:17,2:16:16.02:129,0,16	0/0:11,1:6:15.50:0,15,112	0/1:18,0:13:53.67:54,0,115	0/1:18,0:15:95.57:96,0,126	0/0:17,0:10:12.34:0,12,149	0/1:19,0:14:22.31:22,0,136	0/0:25,0:12:35.70:0,36,382	0/0:18,0:14:32.54:0,33,302	0/0:13,0:6:12.03:0,12,145
chr10	14918783	.	T	TGG	590.69	PASS	AB=0.980;AC=15;AF=0.268;AN=56;BaseQRankSum=4.544;DP=452;FS=6.681;HRun=0;HaplotypeScore=83.8458;InbreedingCoeff=-0.2402;MQ=27.05;MQ0=82;MQRankSum=-3.933;QD=2.58;ReadPosRankSum=5.661;VQSLOD=0.6640;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:18,3:14:91.04:91,0,117	1/1:7,1:1:3.01:45,3,0	0/0:18,0:2:6.02:0,6,78	0/0:22,0:4:1.13:0,1,4	0/0:23,0:17:46.02:0,46,607	0/0:15,0:7:21.04:0,21,265	0/0:10,0:6:11.36:0,11,113	0/0:13,0:5:9.03:0,9,128	0/1:10,1:5:27.62:37,0,28	0/1:19,0:9:9.24:9,0,228	0/0:14,0:10:2.89:0,3,141	0/1:10,0:4:43.87:45,0,44	0/1:13,0:5:24.52:34,0,25	0/1:11,0:7:7.09:7,0,90	0/0:24,0:15:30.92:0,31,314	0/0:6,0:3:7.21:0,7,53	0/1:23,0:10:2.46:2,0,134	0/0:15,0:8:18.68:0,19,178	0/1:17,0:7:18.31:18,0,19	0/0:19,0:16:26.44:0,26,261	0/0:11,0:6:16.36:0,16,147	0/1:18,0:13:46.38:46,0,143	0/1:17,1:15:99:118,0,112	0/0:19,0:13:18.21:0,18,206	0/1:19,0:14:99:111,0,105	0/1:23,0:11:68.23:68,0,160	0/1:18,0:14:78.68:107,0,79	0/0:14,0:7:11.77:0,12,132
chr10	14918784	.	T	TGG	856.84	PASS	AB=0.888;AC=16;AF=0.286;AN=56;BaseQRankSum=4.887;DP=452;FS=0.000;HRun=0;HaplotypeScore=83.6526;InbreedingCoeff=-0.1895;MQ=27.09;MQ0=82;MQRankSum=-2.805;QD=3.69;ReadPosRankSum=5.534;VQSLOD=1.5931;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:20,0:13:41.39:41,0,122	1/1:7,1:1:2.68:11,3,0	0/0:18,0:2:6.01:0,6,72	0/0:22,0:4:1.55:0,2,5	0/0:23,0:17:46.38:0,46,603	0/0:14,0:6:18.04:0,18,241	0/0:10,0:6:8.52:0,9,93	0/0:13,0:5:9.03:0,9,127	0/1:8,3:5:27.29:104,0,27	0/1:17,2:9:65.91:66,0,217	0/1:9,5:10:43.70:44,0,130	0/1:10,0:4:15.08:15,0,38	1/1:13,0:5:5.39:24,5,0	0/0:11,0:7:0.16:0,0,69	0/0:23,0:14:31.79:0,32,353	0/0:7,0:4:7.57:0,8,78	0/1:21,2:10:19.74:20,0,136	0/0:14,0:7:16.84:0,17,177	0/1:16,1:7:22.53:23,0,83	0/0:20,0:17:17.31:0,17,312	0/0:11,0:6:16.07:0,16,144	0/1:18,1:14:23.04:23,0,132	0/1:17,1:15:75.77:76,0,78	0/0:19,0:13:18.41:0,18,182	0/1:18,1:14:89.04:114,0,89	0/1:17,6:11:99:187,0,121	0/1:11,7:14:62.24:263,0,62	0/0:14,1:8:5.58:0,6,108
chr10	14921226	.	CT	C	4244.15	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=5.706;DP=690;FS=1.143;HRun=5;HaplotypeScore=86.7739;InbreedingCoeff=0.9935;MQ=79.38;MQ0=0;MQRankSum=-1.978;QD=29.07;ReadPosRankSum=1.395;VQSLOD=5.1444;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,141,1859	0/0:9,0:9:24.03:0,24,306	0/0:16,0:16:32.65:0,33,320	0/0:19,0:18:12.40:0,12,336	0/0:29,0:29:84.28:0,84,1148	0/0:26,0:26:72.20:0,72,936	0/0:23,0:23:63.17:0,63,813	0/0:26,0:26:72.23:0,72,956	0/0:30,0:30:84.28:0,84,1144	0/0:29,0:29:81.26:0,81,1088	0/0:10,0:10:27.08:0,27,353	0/0:26,0:26:69.22:0,69,927	0/0:23,0:23:66.21:0,66,876	0/0:30,0:30:84.25:0,84,1116	1/1:1,29:30:75.21:850,75,0	1/1:1,20:21:54.15:612,54,0	0/0:36,0:36:99:0,105,1352	1/1:0,28:28:72.21:816,72,0	1/1:3,24:27:72.11:778,72,0	1/1:0,24:24:66.19:747,66,0	1/1:1,15:16:39.11:442,39,0	0/0:25,0:25:72.19:0,72,946	0/0:18,0:18:54.18:0,54,735	0/0:22,0:22:66.18:0,66,855	0/0:29,0:29:75.25:0,75,1021	0/0:27,0:27:75.23:0,75,998	0/0:29,0:28:87.26:0,87,1157	0/0:13,0:13:33.11:0,33,451
chr10	14921402	.	C	CA	5932.87	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=19.256;DP=817;FS=2.536;HRun=1;HaplotypeScore=134.0450;InbreedingCoeff=0.9998;MQ=71.98;MQ0=0;MQRankSum=-3.742;QD=29.52;ReadPosRankSum=1.212;VQSLOD=4.7209;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:60,0:60:99:0,175,2241	0/0:17,0:17:51.17:0,51,662	0/0:11,0:11:30.10:0,30,383	0/0:17,0:17:45.09:0,45,532	0/0:25,0:25:75.17:0,75,910	0/0:18,0:18:54.12:0,54,643	0/0:43,0:43:99:0,126,1621	0/0:30,0:30:87.28:0,87,1116	0/0:36,0:36:99:0,105,1331	0/0:25,0:25:66.21:0,66,857	0/0:11,0:11:30.09:0,30,377	0/0:36,0:36:99:0,105,1362	0/0:29,0:29:84.27:0,84,1084	0/0:29,0:29:84.25:0,84,1072	1/1:3,28:31:87.14:941,87,0	1/1:1,23:23:72.14:791,72,0	0/0:36,0:36:99:0,105,1315	1/1:2,22:24:68.87:733,69,0	1/1:8,17:25:61.94:625,62,0	1/1:6,13:19:57.02:574,57,0	1/1:3,75:78:99:2269,213,0	0/0:31,0:31:93.26:0,93,1172	0/0:18,0:18:51.16:0,51,648	0/0:33,0:32:90.26:0,90,1136	0/0:25,0:25:69.19:0,69,852	0/0:37,0:37:99:0,105,1352	0/0:30,0:30:90.24:0,90,1121	0/0:19,0:19:54.15:0,54,672
chr10	14921404	.	C	CT	7102.31	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=18.036;DP=836;FS=4.400;HRun=0;HaplotypeScore=135.7327;InbreedingCoeff=0.9998;MQ=72.63;MQ0=0;MQRankSum=-3.462;QD=32.43;ReadPosRankSum=0.516;VQSLOD=4.3492;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:58:99:0,175,2411	0/0:17,0:17:51.17:0,51,713	0/0:13,0:13:30.09:0,30,397	0/0:17,0:17:44.61:0,45,571	0/0:26,0:26:72.24:0,72,998	0/0:18,0:18:51.13:0,51,691	0/0:43,0:43:99:0,126,1759	0/0:29,0:29:84.28:0,84,1169	0/0:39,0:39:99:0,108,1505	0/0:23,0:23:66.22:0,66,919	0/0:13,0:13:33.11:0,33,458	0/0:35,0:35:99:0,105,1462	0/0:30,0:30:87.29:0,87,1205	0/0:30,0:30:90.25:0,90,1218	1/1:3,29:32:91.82:1124,92,0	1/1:1,23:23:71.23:841,71,0	0/0:34,0:34:99:0,102,1424	1/1:4,23:27:67.45:839,67,0	1/1:6,20:26:67.33:817,67,0	1/1:5,20:25:58.73:737,59,0	1/1:7,78:85:99:2744,220,0	0/0:30,0:30:90.26:0,90,1228	0/0:18,0:18:54.18:0,54,752	0/0:33,0:32:99:0,99,1320	0/0:24,0:24:66.19:0,66,901	0/0:36,0:36:99:0,105,1465	0/0:32,0:32:90.30:0,90,1250	0/0:19,0:19:54.18:0,54,753
chr10	14922654	.	ATG	A	487.42	PASS	AB=0.898;AC=8;AF=0.143;AN=56;BaseQRankSum=3.454;DP=786;FS=23.953;HRun=0;HaplotypeScore=197.9461;InbreedingCoeff=-0.1610;MQ=47.49;MQ0=19;MQRankSum=-3.341;QD=2.30;ReadPosRankSum=-2.660;VQSLOD=0.8371;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:33,4:36:24.73:25,0,279	0/1:5,1:6:10.53:11,0,24	0/0:66,0:20:53.61:0,54,795	0/0:69,2:28:15.77:0,16,1292	0/0:23,0:23:65.84:0,66,1116	0/0:16,0:16:48.16:0,48,860	0/0:28,0:28:75.12:0,75,1328	0/1:35,4:36:99:319,0,1070	0/0:25,0:25:35.17:0,35,403	0/0:30,0:28:39.49:0,39,1169	0/0:16,0:16:29.28:0,29,315	0/1:24,1:25:10.15:10,0,384	0/1:25,3:27:63.86:64,0,538	0/0:23,1:24:5.06:0,5,355	0/0:28,0:28:73.21:0,73,729	0/0:23,1:23:56.30:0,56,535	0/0:20,0:21:9.60:0,10,379	0/0:22,0:22:39.12:0,39,521	0/0:27,0:26:76.35:0,76,915	0/0:23,0:22:34.64:0,35,255	0/0:46,1:46:45.68:0,46,1021	0/1:19,1:20:99:106,0,314	0/0:19,0:19:31.43:0,31,444	0/0:27,0:27:15.39:0,15,256	0/1:17,10:27:15.43:75,0,15	0/1:29,1:30:8.88:9,0,1040	0/0:24,0:23:52.80:0,53,644	0/0:13,0:13:36.11:0,36,605
chr10	14922656	.	GCA	G	2406.11	PASS	AB=0.784;AC=12;AF=0.214;AN=56;BaseQRankSum=-2.854;DP=802;FS=3.609;HRun=0;HaplotypeScore=193.3534;InbreedingCoeff=0.7114;MQ=47.74;MQ0=19;MQRankSum=6.308;QD=12.40;ReadPosRankSum=6.964;VQSLOD=3.0935;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:37:19.93:0,20,175	0/0:3,0:7:11.49:0,11,80	0/0:66,0:19:11.99:0,12,160	0/0:70,0:28:41.04:0,41,538	0/1:21,2:23:25.19:25,0,568	0/0:16,0:16:30.10:0,30,466	0/0:27,2:29:19.01:0,19,761	0/0:38,0:35:38.42:0,38,244	0/0:10,0:29:20.15:0,20,159	0/0:19,0:33:68.34:0,68,564	0/0:6,0:14:13.98:0,14,74	0/0:23,0:24:12.76:0,13,86	0/0:28,0:27:12.26:0,12,68	0/0:22,0:22:8.21:0,8,57	1/1:10,19:31:47.70:520,48,0	1/1:7,14:23:44.46:443,44,0	0/0:16,0:26:17.04:0,17,145	0/1:10,12:22:14.07:317,0,14	1/1:12,12:24:32.88:366,33,0	1/1:4,17:21:29.92:331,30,0	1/1:21,23:46:56.53:584,57,0	0/0:20,0:20:20.53:0,21,181	0/0:17,0:18:13.46:0,13,88	0/0:28,0:28:3.05:0,3,24	0/0:26,0:27:13.28:0,13,54	0/0:16,0:35:53.41:0,53,451	0/0:14,0:24:31.35:0,31,249	0/0:10,0:12:15.02:0,15,170
chr10	14922731	.	CT	C	6656.82	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=10.260;DP=687;FS=12.185;HRun=2;HaplotypeScore=104.9850;InbreedingCoeff=0.9999;MQ=85.48;MQ0=1;MQRankSum=-5.997;QD=36.18;ReadPosRankSum=2.127;VQSLOD=3.9586;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,29:30:78.25:1012,78,0	0/0:15,0:15:42.14:0,42,629	0/0:26,0:26:72.20:0,72,1034	0/0:22,0:22:53.98:0,54,743	0/0:25,0:25:72.20:0,72,1039	0/0:25,0:25:72.24:0,72,1074	0/0:32,0:32:93.29:0,93,1350	0/0:34,0:34:96.31:0,96,1395	0/0:30,0:30:72.24:0,72,1078	0/0:22,0:22:66.22:0,66,990	0/0:20,0:20:57.19:0,57,854	1/1:0,24:24:72.23:934,72,0	1/1:0,30:30:90.29:1168,90,0	1/1:0,13:13:39.13:506,39,0	0/0:29,0:29:75.25:0,75,1124	0/0:23,0:22:63.20:0,63,925	0/0:34,0:34:93.27:0,93,1367	0/0:15,0:15:39.13:0,39,585	0/0:24,0:24:69.22:0,69,996	0/0:29,0:29:81.27:0,81,1214	0/0:29,0:29:78.26:0,78,1168	1/1:1,26:27:72.23:934,72,0	1/1:0,17:17:45.15:584,45,0	1/1:0,24:24:69.22:895,69,0	1/1:1,18:19:48.16:623,48,0	0/0:32,0:32:93.31:0,93,1386	0/0:25,0:25:63.21:0,63,931	0/0:12,0:12:33.11:0,33,495
chr10	14922968	.	AATTTTTTTTTGGTTCTTTTTTTTTTTTTTCCCCCCG	A	10973.43	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=9.698;DP=438;FS=2.098;HRun=0;HaplotypeScore=357.6895;InbreedingCoeff=0.9229;MQ=63.97;MQ0=9;MQRankSum=-6.363;QD=215.17;ReadPosRankSum=7.106;VQSLOD=3.8678;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:0,11:11:30.10:2688,30,0	0/0:9,0:9:24.08:0,24,2793	0/0:42,0:15:39.60:0,40,1497	0/0:38,0:15:39.15:0,39,1593	0/0:20,0:20:60.21:0,60,7026	0/0:16,0:16:48.16:0,48,5975	0/0:19,0:19:57.20:0,57,6450	0/0:22,0:22:60.21:0,60,4401	0/0:11,0:11:27.09:0,27,2431	0/0:19,0:19:54.19:0,54,5306	0/0:15,0:15:42.14:0,42,3394	1/1:0,8:8:18.06:1714,18,0	1/1:0,7:7:15.05:1381,15,0	1/1:0,12:12:30.10:2854,30,0	0/0:15,0:15:45.11:0,45,3281	0/0:13,0:13:36.12:0,36,3356	0/0:20,0:20:57.18:0,57,5564	0/0:9,0:9:24.08:0,24,2021	0/0:23,0:23:69.22:0,69,4043	0/0:19,0:19:42.13:0,42,3774	0/0:13,0:13:30.10:0,30,1846	1/1:0,6:6:12.04:1134,12,0	1/1:0,1:1:3.01:286,3,0	1/1:1,3:3:6.02:343,6,0	1/1:0,2:2:6.02:573,6,0	0/0:20,0:20:60.21:0,60,4427	0/0:30,0:29:87.30:0,87,8393	0/0:9,0:9:27.09:0,27,3474
chr10	14922969	.	A	AT	6010.29	PASS	AB=0.824;AC=30;AF=0.536;AN=56;BaseQRankSum=-6.352;DP=462;FS=0.969;HRun=9;HaplotypeScore=122.1231;InbreedingCoeff=0.7622;MQ=63.47;MQ0=12;MQRankSum=-1.638;QD=19.33;ReadPosRankSum=-2.560;VQSLOD=3.1365;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:13.64:0,14,41	1/1:1,8:9:24:250,24,0	0/0:41,0:15:14.26:0,14,110	0/1:48,0:18:8:8,0,81	0/0:20,0:20:56.99:0,57,494	0/0:17,0:17:44.89:0,45,377	0/0:18,0:19:52.05:0,52,425	1/1:5,19:24:56.82:597,57,0	1/1:4,8:12:21.06:230,21,0	1/1:2,17:20:53.93:572,54,0	1/1:4,13:17:36.06:381,36,0	0/0:8,0:8:11.62:0,12,34	0/0:7,0:7:8.07:0,8,25	0/0:12,0:12:19.12:0,19,58	1/1:4,11:15:35.96:365,36,0	1/1:4,10:14:30.08:331,30,0	1/1:2,17:20:53.87:558,54,0	1/1:4,7:10:20.95:213,21,0	0/1:10,12:22:11.76:351,0,12	1/1:6,16:21:38.89:407,39,0	1/1:5,8:13:21.01:209,21,0	0/0:6,0:6:5.38:0,5,16	0/0:1,0:1:2.22:0,2,7	0/0:4,0:3:2.22:0,2,7	0/0:2,0:2:4.44:0,4,14	1/1:7,15:22:44.29:493,44,0	1/1:6,23:30:74.09:781,74,0	1/1:1,8:9:24.06:264,24,0
chr10	14923121	.	TTTTC	T	5044.18	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=10.338;DP=455;FS=4.583;HRun=0;HaplotypeScore=81.9175;InbreedingCoeff=0.9857;MQ=72.18;MQ0=0;MQRankSum=-6.053;QD=38.51;ReadPosRankSum=2.087;VQSLOD=4.9490;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:72.23:0,72,1803	1/1:0,4:4:12.04:216,12,0	0/0:11,0:11:26.96:0,27,516	0/0:14,0:13:18.04:0,18,351	0/0:13,0:13:39.12:0,39,956	0/0:19,0:19:57.20:0,57,1458	0/0:25,0:25:75.26:0,75,1891	1/1:5,12:17:30.06:478,30,0	1/1:0,16:15:33.11:593,33,0	1/1:3,15:18:45.13:751,45,0	1/1:4,10:14:30.10:539,30,0	0/0:13,0:13:36.12:0,36,914	0/0:18,0:18:48.16:0,48,1230	0/0:20,0:20:54.19:0,54,1374	0/0:9,0:9:27.09:0,27,670	0/0:12,0:12:36.12:0,36,920	1/1:4,8:12:12.04:216,12,0	0/0:15,0:15:36.12:0,36,931	0/0:15,0:15:42.13:0,42,1013	0/0:14,0:14:39.12:0,39,955	0/0:9,0:9:15.05:0,15,353	0/0:22,0:22:57.20:0,57,1473	0/0:18,0:18:48.16:0,48,1222	0/0:22,0:21:54.19:0,54,1373	0/0:27,0:27:66.23:0,66,1684	1/1:1,19:20:57.16:959,57,0	1/1:2,17:19:48.16:863,48,0	1/1:1,10:11:24.08:431,24,0
chr10	14923574	.	TACACACACAC	T	665.92	PASS	AB=0.905;AC=15;AF=0.357;AN=42;BaseQRankSum=-0.484;DP=546;FS=0.000;HRun=0;HaplotypeScore=150.6318;InbreedingCoeff=0.4766;MQ=51.07;MQ0=34;MQRankSum=-2.811;QD=5.29;ReadPosRankSum=1.690;VQSLOD=2.6791;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:8.70:0,9,255	1/1:2,3:5:3.01:88,3,0	./.	0/0:50,0:15:0:0,0,0	./.	0/0:19,0:17:15.05:0,15,422	0/0:31,0:35:25.74:0,26,746	0/0:14,0:13:2.98:0,3,22	1/1:16,1:16:1.36:81,1,0	0/1:11,0:11:2.36:22,0,2	./.	0/0:28,0:27:20.86:0,21,491	0/0:27,0:25:21.03:0,21,687	0/0:26,0:25:12.03:0,12,228	./.	1/1:11,2:12:2.68:88,3,0	1/1:22,5:27:13.28:336,13,0	1/1:14,1:15:1.50:86,1,0	1/1:15,0:15:2.22:7,2,0	0/1:5,2:7:0:0,0,0	./.	./.	0/0:12,0:12:2.86:0,3,30	0/0:35,0:35:8.10:0,8,228	0/0:13,0:13:8.96:0,9,156	0/0:10,0:10:1.82:0,2,5	0/1:14,1:14:0.80:83,0,1	./.
chr10	14923599	.	A	ACGCAC	292.71	PASS	AB=0.764;AC=9;AF=0.167;AN=54;BaseQRankSum=4.521;DP=556;FS=3.912;HRun=0;HaplotypeScore=138.0157;InbreedingCoeff=0.0935;MQ=43.80;MQ0=46;MQRankSum=-0.968;QD=1.75;ReadPosRankSum=1.322;VQSLOD=2.4568;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:16,0:31:7.50:8,0,70	0/0:8,0:7:9.50:0,10,158	./.	0/0:29,0:2:6.02:0,6,89	0/0:13,0:12:25.01:0,25,441	0/0:24,0:21:47.54:0,48,898	0/0:35,0:36:64.49:0,64,1223	0/0:10,0:7:21.07:0,21,408	0/0:17,0:16:26.89:0,27,503	0/0:18,0:18:54.18:0,54,1061	0/0:9,0:8:3.01:0,3,62	0/1:9,0:23:99:146,0,118	0/1:19,0:19:99:129,0,172	0/1:11,0:23:38.29:38,0,73	0/0:11,0:11:24.08:0,24,477	0/0:17,0:16:32.74:0,33,521	0/0:38,0:36:60.25:0,60,1069	0/0:18,0:17:45.08:0,45,760	0/0:10,0:10:27.02:0,27,439	0/0:14,0:13:20.75:0,21,398	0/0:44,0:38:78.24:0,78,1467	0/0:7,0:5:2.74:0,3,12	1/1:11,0:12:0.55:21,1,0	0/1:38,0:39:23.33:23,0,110	1/1:4,2:14:0.68:54,1,0	0/0:16,0:15:42.13:0,42,798	0/0:19,0:17:42.14:0,42,826	0/0:4,0:4:12.04:0,12,230
chr10	14923601	.	A	ACGCACG	1157.10	PASS	AB=0.961;AC=13;AF=0.241;AN=54;BaseQRankSum=7.643;DP=540;FS=24.579;HRun=0;HaplotypeScore=136.8858;InbreedingCoeff=0.5397;MQ=43.62;MQ0=43;MQRankSum=-0.597;QD=6.93;ReadPosRankSum=1.807;VQSLOD=1.0497;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:31,1:31:15.90:66,0,16	0/0:8,0:7:8.83:0,9,133	./.	0/0:29,0:4:6.02:0,6,81	0/0:13,0:12:25.01:0,25,366	0/0:25,0:22:46.75:0,47,693	0/0:37,0:37:66.72:0,67,1066	0/0:10,0:7:21.06:0,21,290	0/0:17,0:16:26.25:0,26,357	0/0:18,0:18:54.17:0,54,914	0/0:9,0:8:3.01:0,3,49	1/1:19,2:20:23.39:330,23,0	0/1:19,2:19:53.78:431,0,54	1/1:22,0:21:21.03:239,21,0	0/0:11,0:11:24.05:0,24,368	0/1:16,0:16:16.87:17,0,397	0/0:35,0:33:58.25:0,58,855	0/0:19,0:18:50.58:0,51,726	0/0:8,0:8:24.03:0,24,369	0/0:14,0:13:21.05:0,21,335	0/0:44,0:38:81.19:0,81,1206	1/1:7,0:5:3.01:48,3,0	0/0:11,2:12:2.60:0,3,10	1/1:38,1:39:9.48:128,9,0	1/1:8,1:9:6.01:64,6,0	0/0:15,0:14:42.12:0,42,648	0/0:19,0:17:42.14:0,42,652	0/0:4,0:4:12.04:0,12,162
chr10	14923809	.	A	AGAGG	2830.95	PASS	AC=22;AF=0.440;AN=50;BaseQRankSum=-5.153;DP=411;FS=14.048;HRun=0;HaplotypeScore=66.8177;InbreedingCoeff=0.8670;MQ=62.58;MQ0=4;MQRankSum=-0.985;QD=19.26;ReadPosRankSum=1.616;VQSLOD=2.1422;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,0:9:5.96:45,6,0	0/0:6,0:6:18.06:0,18,292	0/0:16,0:4:3.01:0,3,33	0/0:25,0:14:15.03:0,15,205	0/0:17,0:17:45.10:0,45,635	0/0:16,0:16:24.06:0,24,348	0/0:25,0:25:45.08:0,45,599	0/0:20,0:19:36.06:0,36,495	0/0:21,0:21:57.19:0,57,932	0/0:12,0:12:30.10:0,30,464	0/0:11,0:11:21.03:0,21,276	1/1:3,0:3:5.77:33,6,0	./.	1/1:3,0:3:3.89:28,4,0	1/1:7,16:23:24.08:590,24,0	1/1:6,13:19:12.04:296,12,0	0/0:24,0:24:57.13:0,57,860	1/1:3,6:9:12.04:295,12,0	1/1:7,8:14:23.87:275,24,0	1/1:6,11:17:26.61:415,27,0	1/1:7,30:40:43.32:948,43,0	./.	./.	1/1:4,0:4:6:53,6,0	1/1:5,0:4:5.99:49,6,0	0/0:26,0:25:59.84:0,60,807	0/0:21,0:19:45.12:0,45,686	0/0:16,0:16:42.13:0,42,661
chr10	14925841	.	TCCATC	T	8643.80	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=6.920;DP=651;FS=2.549;HRun=0;HaplotypeScore=138.4013;InbreedingCoeff=0.9943;MQ=85.91;MQ0=1;MQRankSum=-9.949;QD=51.15;ReadPosRankSum=2.072;VQSLOD=5.3788;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:87.30:0,87,2651	1/1:0,6:6:18.06:391,18,0	0/0:22,0:22:63.04:0,63,1762	0/0:22,0:23:35.41:0,35,1548	0/0:15,0:15:39.13:0,39,1170	0/0:22,0:22:66.23:0,66,2068	0/0:29,0:29:78.27:0,78,2398	1/1:1,12:13:33.11:716,33,0	1/1:3,28:31:69.24:1497,69,0	1/1:3,18:21:54.19:1169,54,0	1/1:6,6:11:15.05:319,15,0	0/0:40,0:40:99:0,120,3798	0/0:29,0:29:87.30:0,87,2706	0/0:28,0:28:84.29:0,84,2614	0/0:22,0:22:66.23:0,66,2046	0/0:27,0:27:81.28:0,81,2567	1/1:4,29:33:81.28:1746,81,0	0/0:27,0:27:78.24:0,78,2387	0/0:17,0:17:51.18:0,51,1609	0/0:14,0:14:42.14:0,42,1299	0/0:78,0:78:99:0,217,6666	0/0:9,0:9:18.06:0,18,570	0/0:15,0:15:36.11:0,36,1064	0/0:22,0:22:54.19:0,54,1710	0/0:9,0:9:24.08:0,24,756	1/1:1,29:30:75.23:1569,75,0	1/1:1,10:11:27.09:586,27,0	1/1:0,12:12:30.10:651,30,0
chr10	14926022	.	GC	G	8310.16	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=16.302;DP=674;FS=11.373;HRun=2;HaplotypeScore=99.9167;InbreedingCoeff=0.9224;MQ=77.00;MQ0=0;MQRankSum=0.049;QD=35.21;ReadPosRankSum=4.226;VQSLOD=4.2211;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,50:50:99:2013,144,0	0/0:8,0:8:24.08:0,24,384	0/0:13,0:13:26.94:0,27,376	0/1:16,0:16:9.87:10,0,273	0/0:19,0:19:57.19:0,57,904	0/0:8,0:8:24.08:0,24,384	0/0:30,0:30:90.29:0,90,1413	0/0:23,0:23:66.21:0,66,1031	0/0:22,0:22:66.23:0,66,1055	0/0:33,0:33:93.30:0,93,1444	0/0:18,0:18:51.17:0,51,814	1/1:0,28:28:72.24:1006,72,0	1/1:0,31:31:90.30:1258,90,0	1/1:0,26:26:72.24:1007,72,0	0/0:25,0:25:75.24:0,75,1174	0/0:25,0:25:75.26:0,75,1199	0/0:38,0:38:99:0,114,1765	0/0:44,0:44:99:0,132,2084	0/0:20,0:20:60.20:0,60,951	0/0:23,0:23:66.21:0,66,1029	0/0:34,0:34:99:0,102,1582	1/1:0,25:25:69.23:964,69,0	1/1:0,21:21:50.91:710,51,0	1/1:0,23:23:57.19:797,57,0	1/1:0,16:16:39.13:545,39,0	0/0:23,0:23:69.24:0,69,1103	0/0:19,0:19:54.17:0,54,836	0/0:13,0:13:39.13:0,39,623
chr10	14926508	.	A	AGGGAGGGAGGG	580.94	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-0.468;DP=513;FS=6.699;HRun=0;HaplotypeScore=197.7655;InbreedingCoeff=0.8383;MQ=70.97;MQ0=6;MQRankSum=-1.526;QD=10.37;ReadPosRankSum=-6.261;VQSLOD=-0.2198;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:12,2:23:3.01:116,3,0	0/0:10,0:10:24.05:0,24,622	0/0:19,0:12:3.02:0,3,169	0/0:34,0:18:29.01:0,29,480	0/0:15,0:15:39.02:0,39,918	0/0:22,0:22:57.14:0,57,1537	0/0:23,0:24:58.69:0,59,1533	0/0:23,0:23:42.03:0,42,776	0/0:27,0:27:78.16:0,78,2032	0/0:23,0:23:48.13:0,48,1382	0/0:13,0:13:35.83:0,36,852	1/1:4,0:4:8.96:72,9,0	1/1:4,0:4:9:110,9,0	1/1:2,0:2:5.97:47,6,0	0/0:32,0:32:75.20:0,75,2125	0/0:15,0:15:33.10:0,33,986	0/0:38,0:38:98.80:0,99,2587	0/0:20,0:20:57.07:0,57,1277	0/0:19,0:19:36.68:0,37,779	0/0:14,0:14:36.11:0,36,1003	0/0:46,0:46:99:0,119,3088	1/1:8,0:8:14.98:221,15,0	1/1:4,0:4:5.99:50,6,0	1/1:10,0:10:12.45:118,12,0	1/1:1,0:1:3:27,3,0	0/0:33,0:33:75.09:0,75,1819	0/0:25,0:25:69.03:0,69,1436	0/0:5,0:5:12.01:0,12,167
chr10	14927513	.	C	CG	33.10	PASS	AC=8;AF=0.154;AN=52;BaseQRankSum=4.521;DP=653;FS=0.000;HRun=0;HaplotypeScore=66.9719;InbreedingCoeff=0.7957;MQ=89.66;MQ0=0;MQRankSum=1.031;QD=4.14;ReadPosRankSum=-3.682;VQSLOD=2.3754;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,111,1518	0/0:9,0:9:27.09:0,27,372	0/0:37,0:37:96.34:0,96,1383	0/0:36,0:35:71.39:0,71,1141	0/0:23,0:23:69.23:0,69,960	0/0:28,0:28:84.28:0,84,1174	0/0:26,0:26:78.24:0,78,1072	0/0:25,0:25:72.24:0,72,1005	0/0:33,0:33:99:0,99,1370	0/0:28,0:28:84.28:0,84,1175	0/0:13,0:13:39.13:0,39,545	0/0:26,0:26:72.24:0,72,1004	0/0:24,0:24:72.24:0,72,1005	0/0:42,0:42:99:0,126,1728	1/1:0,3:3:3.01:39,3,0	./.	0/0:48,0:48:99:0,141,1956	1/1:1,0:1:2.90:16,3,0	1/1:0,2:2:6:60,6,0	1/1:2,0:2:3.01:38,3,0	./.	0/0:34,0:34:99:0,99,1384	0/0:18,0:18:51.16:0,51,690	0/0:35,0:35:99:0,105,1446	0/0:25,0:25:72.24:0,72,1007	0/0:42,0:42:99:0,117,1621	0/0:29,0:29:87.25:0,87,1160	0/0:21,0:21:63.21:0,63,881
chr10	14928330	.	GGTGTGTGTGTGTGTGTGTGTGTGT	G	3034.77	PASS	AB=0.942;AC=21;AF=0.438;AN=48;BaseQRankSum=6.575;DP=475;FS=0.968;HRun=0;HaplotypeScore=267.8619;InbreedingCoeff=0.3939;MQ=64.29;MQ0=20;MQRankSum=-4.481;QD=14.88;ReadPosRankSum=2.508;VQSLOD=2.3954;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:13,5:18:2.97:20,3,0	1/1:6,0:7:3.01:180,3,0	0/0:27,0:19:12.04:0,12,270	0/0:31,0:23:30.09:0,30,1247	0/0:10,0:10:15.05:0,15,1470	0/0:18,0:18:33.11:0,33,3121	0/0:41,0:40:59.64:0,60,4841	1/1:25,0:25:6.95:83,7,0	0/1:11,0:11:86.56:344,0,87	1/1:11,0:11:15.05:624,15,0	./.	1/1:11,3:14:3.01:187,3,0	1/1:7,5:14:11.23:683,11,0	1/1:7,5:12:6.02:372,6,0	0/0:9,0:15:6.02:0,6,175	0/0:7,0:14:11.40:0,11,185	0/1:18,0:19:99:335,0,385	0/0:12,0:14:18.90:0,19,468	0/0:20,0:20:7.12:0,7,339	0/0:8,0:8:3.01:0,3,100	0/0:21,0:17:18.07:0,18,459	./.	./.	1/1:18,5:23:1.18:3,1,0	./.	0/1:21,0:20:99:188,0,217	0/1:8,0:10:0:0,0,0	0/1:11,0:11:99:173,0,583
chr10	14928348	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGAGAGAGAGAGA	T	3624.16	PASS	AB=0.885;AC=15;AF=0.300;AN=50;BaseQRankSum=2.708;DP=403;FS=3.777;HRun=0;HaplotypeScore=279.9731;InbreedingCoeff=0.0631;MQ=40.87;MQ0=40;MQRankSum=-1.667;QD=26.07;ReadPosRankSum=0.293;VQSLOD=2.1889;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:15,0:12:0.27:0,0,94	1/1:6,0:5:3.01:194,3,0	0/0:14,0:7:21.06:0,21,475	0/0:20,0:13:33.11:0,33,1541	0/0:11,0:11:18.53:0,19,2208	0/0:20,0:20:42.14:0,42,4970	0/0:33,0:32:66.87:0,67,5488	0/1:12,0:12:4.97:173,0,5	0/1:4,12:15:89.53:508,0,90	1/1:12,0:8:17.92:751,18,0	./.	0/1:11,0:9:99:160,0,138	0/1:10,0:10:82.20:322,0,82	0/1:11,0:10:10.96:249,0,11	0/0:20,0:18:15.05:0,15,864	0/0:20,0:20:21.03:0,21,970	0/1:10,4:12:99:482,0,512	0/0:16,0:14:36.10:0,36,2138	0/0:17,0:14:38.79:0,39,1982	0/0:6,0:6:5.27:0,5,148	0/0:27,0:22:25.14:0,25,1252	./.	0/0:10,0:9:3:0,3,25	0/0:20,0:17:1.93:0,2,224	./.	0/1:7,12:18:99:567,0,276	1/1:7,0:5:3:25,3,0	0/1:6,0:5:99:193,0,677
chr10	14928374	.	TGAGAGAGAGAGA	T	1701.41	PASS	AB=1.000;AC=16;AF=0.320;AN=50;BaseQRankSum=3.200;DP=447;FS=0.000;HRun=0;HaplotypeScore=173.5460;InbreedingCoeff=0.5580;MQ=38.75;MQ0=37;MQRankSum=-2.208;QD=11.42;ReadPosRankSum=0.886;VQSLOD=2.5583;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:25:27.56:0,28,1253	1/1:6,1:6:3.01:97,3,0	./.	./.	0/0:14,0:14:18.53:0,19,708	0/1:23,0:22:40.57:41,0,955	0/0:40,0:38:37.01:0,37,1793	0/0:9,0:9:0:0,0,0	1/1:20,0:19:5.77:110,6,0	1/1:10,4:11:8.93:290,9,0	1/1:8,4:10:0.47:1,0,0	0/0:20,0:17:19.24:0,19,798	0/0:20,0:20:18.07:0,18,633	0/0:17,0:16:11.07:0,11,441	0/0:22,0:20:11.93:0,12,482	0/0:23,0:23:25.12:0,25,881	0/1:19,0:17:72.81:86,0,73	0/0:16,0:13:29.12:0,29,1029	0/0:11,0:11:22.89:0,23,747	0/0:5,0:5:0.89:0,1,2	0/0:21,0:16:12.04:0,12,623	0/0:8,0:8:3.01:0,3,150	0/0:11,0:9:3.01:0,3,150	0/0:27,0:23:9.50:0,10,356	./.	1/1:22,1:22:7.85:473,8,0	1/1:11,3:12:8.99:261,9,0	1/1:7,6:13:15.05:498,15,0
chr10	14929232	.	A	AGG	1072.51	PASS	AB=1.000;AC=31;AF=0.574;AN=54;BaseQRankSum=3.090;DP=385;FS=4.706;HRun=10;HaplotypeScore=73.6890;InbreedingCoeff=0.7594;MQ=92.39;MQ0=0;MQRankSum=-2.102;QD=7.06;ReadPosRankSum=-3.310;VQSLOD=-0.6037;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:16:9.83:64,10,0	0/1:4,0:4:0:0,0,0	0/0:21,0:22:32.45:0,32,305	0/0:20,0:25:29.41:0,29,260	0/0:13,0:14:30.65:0,31,279	0/0:19,0:19:39.01:0,39,389	0/0:21,0:23:44.42:0,44,461	1/1:8,0:12:15.58:71,16,0	1/1:3,2:9:9.02:102,9,0	1/1:6,1:9:5.51:53,6,0	1/1:9,1:10:5.99:50,6,0	./.	1/1:4,0:4:2.94:18,3,0	1/1:7,0:7:5.90:42,6,0	0/0:15,0:15:33.02:0,33,336	0/0:11,0:13:11.90:0,12,174	1/1:10,14:33:17.05:434,17,0	0/0:28,0:28:66.04:0,66,660	0/0:15,0:17:12.95:0,13,131	0/0:14,0:14:17.97:0,18,183	0/0:38,0:38:54.98:0,55,707	1/1:4,0:4:2.96:19,3,0	1/1:3,0:3:2.92:17,3,0	1/1:13,0:13:9:82,9,0	1/1:6,0:6:3:26,3,0	1/1:6,0:8:4.99:18,5,0	1/1:7,4:12:20.03:222,20,0	1/1:2,0:2:5.99:48,6,0
chr10	14929233	.	G	GAC	87.84	PASS	AB=0.768;AC=5;AF=0.089;AN=56;BaseQRankSum=0.058;DP=371;FS=1.333;HRun=0;HaplotypeScore=71.3243;InbreedingCoeff=0.2491;MQ=90.89;MQ0=0;MQRankSum=-1.963;QD=2.20;ReadPosRankSum=-1.916;VQSLOD=1.0285;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:9,6:15:42.71:43,0,53	0/0:5,0:5:5.98:0,6,66	0/0:20,0:20:51.99:0,52,612	0/0:24,0:24:68.17:0,68,712	0/0:15,0:15:33.09:0,33,474	0/0:18,0:18:51.16:0,51,789	0/0:22,0:22:63.14:0,63,911	0/0:12,0:12:30.01:0,30,325	0/0:10,0:10:17.05:0,17,185	0/0:8,0:8:17.84:0,18,229	0/0:10,0:10:15.03:0,15,175	0/0:0,3:3:0.13:0,0,1	0/1:5,0:5:6.24:65,0,6	1/1:2,4:7:5.05:58,5,0	0/0:15,0:15:41.65:0,42,632	0/0:12,0:12:30.10:0,30,466	0/0:28,0:28:52.21:0,52,500	0/0:28,0:28:84.26:0,84,1296	0/0:15,0:15:41.93:0,42,562	0/0:13,0:13:33.04:0,33,419	0/0:40,0:40:99:0,105,1537	0/0:1,0:2:2.88:0,3,15	0/0:4,0:4:2.96:0,3,19	0/1:4,8:13:34.13:34,0,55	0/0:4,3:7:6.30:0,6,37	0/0:6,0:6:12.02:0,12,138	0/0:12,0:12:25.76:0,26,229	0/0:2,0:2:5.96:0,6,43
chr10	14929908	.	TCC	T	14526.96	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=19.889;DP=716;FS=6.136;HRun=3;HaplotypeScore=121.3168;InbreedingCoeff=0.9986;MQ=80.50;MQ0=0;MQRankSum=-5.699;QD=39.58;ReadPosRankSum=2.542;VQSLOD=4.3971;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,120,2243	1/1:0,6:6:18.06:275,18,0	0/0:19,0:19:57.16:0,57,1020	0/0:22,0:22:62.82:0,63,1042	0/0:21,0:21:60.13:0,60,1054	0/0:23,0:23:66.21:0,66,1241	0/0:31,0:31:93.30:0,93,1726	1/1:0,21:21:60.14:851,60,0	1/1:0,25:25:69.23:1055,69,0	1/1:0,25:25:72.22:1077,72,0	1/1:0,12:12:33.11:503,33,0	0/0:33,0:33:96.33:0,96,1840	0/0:32,0:32:96.26:0,96,1749	0/0:31,0:31:93.32:0,93,1790	1/1:0,26:26:75:1147,75,0	1/1:0,15:15:39.13:596,39,0	1/1:1,35:36:96.33:1469,96,0	1/1:0,25:25:60.20:916,60,0	1/1:1,18:19:51.17:780,51,0	1/1:1,21:22:54.18:825,54,0	1/1:2,49:51:99:1785,117,0	0/0:20,0:20:60.20:0,60,1121	0/0:16,0:16:45.14:0,45,833	0/0:30,0:30:90.31:0,90,1737	0/0:30,0:30:90.31:0,90,1736	1/1:1,36:37:99:1595,105,0	1/1:2,32:34:84.28:1284,84,0	1/1:1,12:13:24.04:367,24,0
chr10	14930846	.	ACCATGCCTCGGGAG	A	13713.97	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=15.569;DP=699;FS=1.673;HRun=0;HaplotypeScore=266.5926;InbreedingCoeff=0.9982;MQ=83.70;MQ0=0;MQRankSum=-16.527;QD=66.25;ReadPosRankSum=3.417;VQSLOD=4.3160;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,33:38:51.18:1928,51,0	0/0:15,0:15:45.15:0,45,2867	0/0:21,0:21:57.17:0,57,2674	0/0:27,0:27:77.48:0,77,4092	0/0:28,0:28:81.23:0,81,5015	0/0:20,0:20:51.17:0,51,3343	0/0:30,0:30:87.28:0,87,5423	0/0:30,0:30:75.26:0,75,4768	0/0:20,0:20:54.17:0,54,3490	0/0:22,0:22:63.21:0,63,3729	0/0:16,0:16:39.13:0,39,2313	1/1:5,24:29:45.09:1847,45,0	1/1:3,22:25:63.22:2631,63,0	1/1:4,20:24:42.14:1673,42,0	0/0:31,0:31:90.31:0,90,5420	0/0:25,0:25:75.26:0,75,4583	0/0:34,0:34:93.28:0,93,5783	0/0:19,0:19:51.18:0,51,3480	0/0:22,0:22:63.22:0,63,3402	0/0:25,0:25:69.21:0,69,3311	0/0:42,0:42:99:0,123,7480	1/1:1,22:23:51.13:1790,51,0	1/1:4,17:21:45.02:1422,45,0	1/1:3,22:25:17.93:540,18,0	1/1:2,20:22:45.15:1884,45,0	0/0:27,0:27:78.27:0,78,5002	0/0:30,0:30:81.28:0,81,5190	0/0:8,0:8:24.08:0,24,1267
chr10	14931342	.	C	CGTGTGT	8517.92	PASS	AB=0.727;AC=48;AF=0.857;AN=56;BaseQRankSum=-3.011;DP=480;FS=82.375;HRun=0;HaplotypeScore=142.2692;InbreedingCoeff=0.2831;MQ=63.95;MQ0=0;MQRankSum=-2.079;QD=19.14;ReadPosRankSum=-0.570;VQSLOD=1.1757;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,0:41:3.78:35,4,0	1/1:0,4:4:3.01:101,3,0	0/0:34,0:21:16.96:0,17,328	0/1:42,0:29:9.72:10,0,540	1/1:3,0:14:20.19:271,20,0	1/1:4,0:7:6.02:78,6,0	1/1:6,0:22:30.10:391,30,0	1/1:0,14:24:63.15:1468,63,0	1/1:0,7:7:9.03:303,9,0	1/1:1,18:23:57.17:1434,57,0	1/1:0,9:10:2.87:101,3,0	1/1:2,0:16:1.41:4,1,0	0/1:2,0:8:0.20:0,0,0	1/1:3,0:8:2.90:20,3,0	1/1:2,0:11:6.02:158,6,0	1/1:3,0:10:3.01:79,3,0	1/1:2,13:18:15.05:360,15,0	0/1:13,0:13:13.36:158,0,13	1/1:11,0:12:20.82:293,21,0	1/1:5,1:17:12.04:332,12,0	1/1:11,0:23:7.84:91,8,0	0/1:4,0:18:0.40:0,0,0	0/1:1,0:13:0:3,0,0	1/1:5,0:26:1.57:9,2,0	0/1:7,0:12:0:1,0,0	1/1:5,17:23:54.14:1591,54,0	1/1:0,13:14:27.09:844,27,0	1/1:0,5:6:12.04:382,12,0
chr10	14933219	.	T	TA	4098.26	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=7.144;DP=321;FS=0.467;HRun=6;HaplotypeScore=37.1109;InbreedingCoeff=0.8709;MQ=59.46;MQ0=15;MQRankSum=-1.629;QD=26.96;ReadPosRankSum=0.433;VQSLOD=3.1536;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,24:26:60.19:754,60,0	0/0:6,0:6:18.04:0,18,183	0/0:5,0:3:9.01:0,9,87	0/1:3,0:3:8.05:8,0,17	0/0:25,0:24:69.16:0,69,704	0/0:11,0:10:27.06:0,27,275	0/0:2,0:1:3.01:0,3,31	0/0:34,0:31:72.12:0,72,717	0/0:5,0:5:12.03:0,12,122	0/0:10,0:9:27.06:0,27,275	0/0:12,0:11:33.08:0,33,337	1/1:3,7:9:21.07:264,21,0	1/1:1,7:8:18.06:226,18,0	1/1:0,9:9:18.06:227,18,0	1/1:1,10:10:30.03:357,30,0	1/1:3,2:4:8.99:95,9,0	0/0:22,0:21:63.14:0,63,642	1/1:2,11:12:33.11:415,33,0	1/1:4,11:13:33.11:415,33,0	1/1:0,11:11:30.10:375,30,0	1/1:3,5:6:12.04:151,12,0	1/1:1,6:6:11.95:130,12,0	1/1:2,6:8:18.06:226,18,0	1/1:1,4:5:9.03:113,9,0	1/1:1,10:11:27.09:340,27,0	0/0:15,0:15:36.03:0,36,349	0/0:13,0:13:36.08:0,36,367	0/0:9,0:9:15.02:0,15,153
chr10	14933296	.	TGGATCCCATGA	T	4581.24	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=9.619;DP=404;FS=4.997;HRun=0;HaplotypeScore=142.4197;InbreedingCoeff=0.9313;MQ=73.48;MQ0=0;MQRankSum=-10.006;QD=72.72;ReadPosRankSum=1.656;VQSLOD=4.7185;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:81.28:0,81,4527	0/0:12,0:12:36.12:0,36,1829	0/0:8,0:8:8.40:0,8,266	0/0:8,0:8:14.37:0,14,245	0/0:24,0:24:69.21:0,69,3177	0/0:12,0:12:36.11:0,36,1741	0/0:11,0:11:27.09:0,27,1491	0/0:29,0:29:72.25:0,72,3738	0/0:8,0:8:21.07:0,21,1081	0/0:17,0:17:42.14:0,42,2204	0/0:15,0:15:33.11:0,33,1847	0/0:20,0:20:57.18:0,57,2843	0/0:14,0:14:33.11:0,33,1732	0/0:13,0:13:27.09:0,27,1420	1/1:5,8:13:27.09:864,27,0	1/1:2,12:14:36.12:1222,36,0	0/0:16,0:16:48.15:0,48,2369	1/1:2,3:5:9.03:306,9,0	1/1:4,12:16:39.13:1273,39,0	1/1:3,8:11:24.08:815,24,0	1/1:3,1:4:3.01:102,3,0	0/0:10,0:10:21.07:0,21,1128	0/0:15,0:15:39.09:0,39,1947	0/0:9,0:9:24.08:0,24,1273	0/0:16,0:16:45.15:0,45,2439	0/0:15,0:15:45.15:0,45,2427	0/0:14,0:14:42.12:0,42,2079	0/0:19,0:19:57.20:0,57,3165
chr10	14933688	.	TGCTGCTGGGAGAGAGGATCTC	T	11939.65	PASS	AB=0.703;AC=21;AF=0.375;AN=56;BaseQRankSum=13.446;DP=514;FS=72.655;HRun=0;HaplotypeScore=310.0026;InbreedingCoeff=0.4557;MQ=86.08;MQ0=0;MQRankSum=-11.605;QD=72.80;ReadPosRankSum=6.169;VQSLOD=1.6753;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:18,10:28:84.14:1704,0,84	0/0:15,0:15:45.15:0,45,3595	0/0:20,0:20:60.21:0,60,3428	0/0:21,0:21:53.33:0,53,3260	0/0:24,0:24:66.08:0,66,6525	0/0:19,0:19:57.20:0,57,5422	0/0:42,0:42:99:0,126,11721	0/0:32,0:32:90.31:0,90,6647	0/0:32,0:32:93.31:0,93,8267	0/0:27,0:27:81.21:0,81,6328	0/0:14,0:14:42.14:0,42,3743	0/1:4,10:13:0.84:1580,0,1	1/1:1,4:5:12.04:636,12,0	1/1:2,9:11:30.03:1412,30,0	0/1:4,4:8:5.22:629,0,5	0/1:5,5:9:99:805,0,302	0/0:29,0:29:87.27:0,87,7840	0/1:5,4:9:47.11:632,0,47	0/1:5,3:8:38.06:473,0,38	1/1:6,3:9:11.61:626,12,0	0/1:18,4:22:99:603,0,102	1/1:5,4:9:4.68:654,5,0	1/1:3,3:6:6.73:479,7,0	1/1:11,6:17:7.17:967,7,0	1/1:3,5:8:10.41:740,10,0	0/0:40,0:41:99:0,117,10348	0/0:28,0:28:81.28:0,81,7570	0/0:6,0:6:18.04:0,18,1562
chr10	14933690	.	CTGCTGGGAGAGAGGATCTCACGTA	C	15904.97	PASS	AB=1.000;AC=27;AF=0.482;AN=56;BaseQRankSum=14.651;DP=507;FS=28.605;HRun=0;HaplotypeScore=322.9226;InbreedingCoeff=0.9125;MQ=85.82;MQ0=0;MQRankSum=-13.712;QD=100.66;ReadPosRankSum=3.122;VQSLOD=3.2863;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:26:59.70:2314,60,0	0/0:15,0:15:42.10:0,42,3583	0/0:20,0:20:50.34:0,50,3140	0/0:20,0:20:44.31:0,44,2784	0/0:24,0:24:68.60:0,69,7050	0/0:19,0:19:57.18:0,57,5561	0/0:42,0:42:99:0,123,12434	0/0:34,0:34:93.29:0,93,6147	0/0:31,0:31:93.30:0,93,8879	0/0:27,0:27:78.23:0,78,6902	0/0:15,0:15:45.13:0,45,4028	1/1:14,0:13:38.98:2051,39,0	1/1:5,0:5:12.04:797,12,0	1/1:11,0:11:30.10:1811,30,0	1/1:8,0:8:18.01:844,18,0	0/1:10,0:9:99:1060,0,317	0/0:28,0:28:84.26:0,84,8130	1/1:9,0:9:23.88:874,24,0	1/1:8,0:8:20.96:687,21,0	1/1:4,5:9:15.01:817,15,0	1/1:20,0:20:35.64:916,36,0	1/1:8,0:8:21.04:875,21,0	1/1:6,0:6:12.03:625,12,0	1/1:16,0:16:23.97:1230,24,0	1/1:8,0:8:24:1003,24,0	0/0:41,0:41:99:0,117,10253	0/0:28,0:28:75.26:0,75,7690	0/0:5,0:5:15.05:0,15,1678
chr10	14933711	.	CGTA	C	2471.40	PASS	AB=0.583;AC=27;AF=0.482;AN=56;BaseQRankSum=14.106;DP=436;FS=76.122;HRun=0;HaplotypeScore=137.8652;InbreedingCoeff=0.8897;MQ=89.86;MQ0=0;MQRankSum=-10.772;QD=26.57;ReadPosRankSum=5.421;VQSLOD=0.8369;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,11:13:35.77:393,36,0	0/0:11,0:11:33.11:0,33,813	0/0:19,0:19:42.11:0,42,1086	0/0:18,0:19:25.71:0,26,558	0/0:26,0:26:75.04:0,75,1780	0/0:19,0:19:57.20:0,57,1395	0/0:47,0:47:99:0,138,3361	0/0:30,0:30:81.26:0,81,1901	0/0:35,0:35:99:0,105,2581	0/0:20,0:20:60.21:0,60,1443	0/0:15,0:15:45.15:0,45,1108	1/1:1,10:11:33.08:382,33,0	1/1:1,4:5:14.87:150,15,0	1/1:1,9:10:28.14:284,28,0	1/1:0,4:4:12.04:143,12,0	0/1:2,5:7:52.92:184,0,53	0/0:27,0:27:78.27:0,78,1910	1/1:0,4:4:12.04:153,12,0	1/1:0,4:4:12.04:158,12,0	1/1:5,3:8:12.02:130,12,0	1/1:2,4:6:11.06:112,11,0	1/1:1,4:5:14.41:149,14,0	1/1:0,3:3:9.03:106,9,0	1/1:1,6:7:18.05:207,18,0	1/1:1,5:6:14.76:144,15,0	0/0:36,0:36:99:0,105,2537	0/0:28,0:28:78.27:0,78,1832	0/0:11,0:11:33.11:0,33,746
chr10	14933714	.	A	AC	2406.01	PASS	AB=1.000;AC=27;AF=0.482;AN=56;BaseQRankSum=15.340;DP=501;FS=103.733;HRun=0;HaplotypeScore=169.0093;InbreedingCoeff=0.9166;MQ=86.25;MQ0=0;MQRankSum=-13.341;QD=15.62;ReadPosRankSum=3.995;VQSLOD=0.2690;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:17,1:18:38.49:281,38,0	0/0:11,0:11:33.11:0,33,461	0/0:21,0:21:48.76:0,49,616	0/0:20,0:20:43.98:0,44,440	0/0:26,0:26:71.98:0,72,1003	0/0:18,0:18:54.18:0,54,755	0/0:48,0:48:99:0,138,1902	0/0:32,0:32:84.27:0,84,1154	0/0:35,0:35:99:0,105,1462	0/0:19,0:19:57.18:0,57,776	0/0:15,0:15:45.15:0,45,629	1/1:11,0:11:29.74:153,30,0	1/1:10,0:10:23.59:250,24,0	1/1:12,1:13:28.52:216,29,0	1/1:11,0:11:28.74:279,29,0	0/1:7,0:7:22.43:84,0,22	0/0:25,0:25:75.25:0,75,1049	1/1:9,0:9:20.29:179,20,0	1/1:10,0:10:29.58:360,30,0	1/1:11,0:11:11.01:53,11,0	1/1:18,1:19:27.66:168,28,0	1/1:5,1:6:16.55:128,17,0	1/1:5,0:5:13.97:112,14,0	1/1:14,0:14:32.69:201,33,0	1/1:9,1:10:18.02:168,18,0	0/0:37,0:37:99:0,105,1428	0/0:24,0:24:72.23:0,72,989	0/0:16,0:16:42.09:0,42,524
chr10	14933843	.	AACACACACACACACACACACAC	A	2573.14	PASS	AB=0.704;AC=17;AF=0.327;AN=52;BaseQRankSum=1.730;DP=419;FS=0.000;HRun=0;HaplotypeScore=230.3991;InbreedingCoeff=0.5284;MQ=55.00;MQ0=10;MQRankSum=-2.720;QD=19.06;ReadPosRankSum=0.065;VQSLOD=2.2417;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:18.53:0,19,1213	1/1:2,1:4:5.60:327,6,0	0/0:21,0:13:3.01:0,3,45	0/0:28,0:15:5.05:0,5,102	0/0:14,0:20:18.06:0,18,422	0/1:11,0:19:19.10:19,0,198	0/0:19,0:19:21.02:0,21,521	1/1:25,0:24:3:57,3,0	1/1:13,4:17:3.01:174,3,0	1/1:9,9:18:12.82:589,13,0	./.	0/0:14,0:14:4.14:0,4,645	0/0:14,0:14:15.05:0,15,889	0/0:12,0:12:6.02:0,6,424	./.	0/0:12,0:9:3.01:0,3,70	1/1:12,7:19:9.24:522,9,0	0/0:9,0:8:15.02:0,15,662	0/0:5,0:5:3.01:0,3,79	0/0:12,0:13:18.04:0,18,821	0/0:24,0:24:3.48:0,3,277	0/0:10,0:10:1.13:0,1,164	0/0:10,0:11:8.98:0,9,327	0/0:18,0:19:22.84:0,23,1554	0/0:4,0:3:3.01:0,3,255	1/1:13,3:16:9.01:372,9,0	1/1:6,4:10:9.03:501,9,0	1/1:5,1:6:3.01:174,3,0
chr10	14933895	.	CTG	C	752.09	PASS	AB=0.931;AC=22;AF=0.393;AN=56;BaseQRankSum=7.854;DP=567;FS=26.537;HRun=0;HaplotypeScore=128.4899;InbreedingCoeff=0.5851;MQ=44.11;MQ0=49;MQRankSum=-4.274;QD=3.47;ReadPosRankSum=-4.986;VQSLOD=-0.6051;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:15,3:17:6.29:81,6,0	0/0:3,0:3:8.79:0,9,70	0/1:62,0:12:11.06:11,0,192	0/0:96,0:12:22.40:0,22,241	0/0:20,0:19:30.09:0,30,434	0/0:22,0:21:44.23:0,44,509	0/0:20,0:20:48.15:0,48,770	0/0:33,0:30:63.92:0,64,1121	0/0:17,0:17:33.06:0,33,416	0/0:30,0:29:77.99:0,78,1057	0/0:9,0:9:18.02:0,18,224	1/1:10,3:10:8.86:102,9,0	1/1:11,4:14:21.48:200,21,0	0/1:10,0:10:2.86:51,0,3	1/1:9,1:9:15.09:71,15,0	0/1:10,1:6:0.68:20,0,1	0/0:30,0:30:62.28:0,62,742	0/1:6,0:6:13.26:45,0,13	1/1:2,6:8:17.54:142,18,0	1/1:9,4:13:7.78:70,8,0	0/0:8,4:9:2.66:0,3,24	1/1:9,5:12:5.52:39,6,0	0/1:10,3:13:2.30:9,0,2	1/1:14,4:16:6.16:66,6,0	0/1:5,1:6:0.93:32,0,1	0/0:18,0:18:51.14:0,51,688	0/0:29,0:24:63.05:0,63,845	0/0:11,0:9:23.98:0,24,308
chr10	14933897	.	G	GTC	263.21	PASS	AB=0.775;AC=16;AF=0.286;AN=56;BaseQRankSum=5.424;DP=606;FS=0.863;HRun=0;HaplotypeScore=146.3517;InbreedingCoeff=0.4853;MQ=44.03;MQ0=49;MQRankSum=-2.815;QD=1.89;ReadPosRankSum=-3.746;VQSLOD=1.6583;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:12,8:19:0.06:1,0,0	0/0:3,0:3:8.99:0,9,94	0/0:62,0:13:1.04:0,1,190	0/0:101,0:12:19.46:0,19,152	0/0:20,0:19:30.10:0,30,389	0/0:22,0:21:44.50:0,45,518	0/0:21,0:21:48.09:0,48,620	0/0:37,0:34:72.91:0,73,863	0/0:20,0:20:33.09:0,33,410	0/0:31,0:30:77.77:0,78,939	0/0:9,0:9:18.02:0,18,201	0/0:14,1:12:3.02:0,3,8	1/1:10,6:15:3.25:67,3,0	0/1:7,6:13:0:0,0,0	0/1:8,6:13:19.04:40,0,19	1/1:6,5:8:5.28:55,5,0	0/0:30,0:30:54.46:0,54,761	1/1:4,4:8:5.97:139,6,0	0/1:9,0:9:10.48:44,0,10	1/1:10,5:15:5.18:36,5,0	0/0:10,1:9:2.93:0,3,35	1/1:13,2:13:2.73:20,3,0	0/0:12,5:17:0.70:0,1,1	1/1:15,3:16:1.55:4,2,0	0/0:5,1:6:0.47:0,0,1	0/0:18,0:18:51.15:0,51,630	0/0:31,0:26:63.14:0,63,779	0/0:11,0:9:24.08:0,24,311
chr10	14933907	.	G	GTC	928.34	PASS	AB=0.755;AC=23;AF=0.426;AN=54;BaseQRankSum=6.830;DP=648;FS=1.525;HRun=0;HaplotypeScore=149.7699;InbreedingCoeff=0.5136;MQ=49.77;MQ0=38;MQRankSum=-1.768;QD=3.08;ReadPosRankSum=-4.075;VQSLOD=1.4290;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:12,8:19:5.96:78,6,0	0/0:4,0:4:6.88:0,7,61	0/0:76,0:17:9.37:0,9,129	0/1:116,1:16:13.30:13,0,68	0/0:21,0:21:39.09:0,39,452	0/0:22,0:22:38.63:0,39,445	0/0:21,0:21:54.17:0,54,663	0/0:36,0:36:63.10:0,63,763	0/0:21,0:21:36.11:0,36,442	0/0:31,0:32:76.30:0,76,874	0/0:11,0:11:24.06:0,24,282	1/1:12,2:13:6.42:92,6,0	0/1:8,7:15:4.01:177,0,4	0/1:3,8:11:27.97:40,0,28	0/1:6,9:14:31.13:40,0,31	1/1:5,7:11:5.92:80,6,0	0/0:31,0:31:54.73:0,55,670	1/1:3,5:8:12.04:191,12,0	1/1:12,0:12:4.95:143,5,0	1/1:9,7:16:5.88:81,6,0	0/1:8,1:8:0:0,0,0	1/1:14,3:15:2.77:44,3,0	1/1:13,7:20:2.45:37,2,0	1/1:12,3:14:6.02:87,6,0	./.	0/0:23,0:23:45.14:0,45,547	0/0:30,0:29:69.21:0,69,827	0/0:11,0:10:21.06:0,21,250
chr10	14933996	.	G	GCCATTTGAGTGTCT	25685.80	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-1.009;DP=421;FS=54.695;HRun=0;HaplotypeScore=161.8753;InbreedingCoeff=0.9832;MQ=95.98;MQ0=0;MQRankSum=-15.323;QD=150.21;ReadPosRankSum=1.174;VQSLOD=3.1955;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,17:24:66.23:4366,66,0	0/0:10,0:10:30.10:0,30,1190	0/0:25,0:25:69.24:0,69,2509	0/0:25,0:25:63.13:0,63,2431	0/0:7,0:7:21.06:0,21,751	0/0:13,0:13:36.12:0,36,1315	0/0:23,0:23:63.20:0,63,2460	0/0:21,0:21:57.19:0,57,2162	0/0:16,0:16:42.14:0,42,1626	0/0:15,0:15:45.15:0,45,1738	0/0:12,0:12:36.12:0,36,1489	1/1:8,9:17:39.13:2355,39,0	1/1:6,12:19:51.18:3378,51,0	1/1:9,6:15:33.11:2211,33,0	1/1:7,7:15:39.13:2231,39,0	1/1:7,5:11:33.11:1833,33,0	0/0:39,0:39:99:0,111,4549	1/1:2,7:10:27.09:1758,27,0	1/1:6,1:7:21.07:1021,21,0	1/1:8,1:9:24.08:1293,24,0	1/1:3,3:6:18.06:1188,18,0	1/1:1,3:6:12.04:763,12,0	1/1:3,3:6:9.03:630,9,0	1/1:8,6:14:21.07:1174,21,0	1/1:5,5:11:27.09:1484,27,0	0/0:13,0:13:36.12:0,36,1502	0/0:25,0:25:66.23:0,66,2750	0/0:6,0:6:18.06:0,18,658
chr10	14934134	.	C	CA	7877.06	PASS	AB=0.552;AC=27;AF=0.482;AN=56;BaseQRankSum=-3.601;DP=429;FS=4.068;HRun=2;HaplotypeScore=44.3677;InbreedingCoeff=0.9439;MQ=90.24;MQ0=0;MQRankSum=-7.822;QD=35.80;ReadPosRankSum=3.819;VQSLOD=5.0481;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,42:44:99:1597,111,0	0/0:3,0:3:9.03:0,9,112	0/0:22,0:22:60.14:0,60,709	0/0:15,0:15:45.14:0,45,556	0/0:9,0:9:27.08:0,27,327	0/0:12,0:12:36.11:0,36,446	0/0:26,0:26:72.23:0,72,892	0/0:23,0:23:66.21:0,66,818	0/0:11,0:11:30.09:0,30,372	0/0:11,0:11:30.09:0,30,370	0/0:6,0:6:18.06:0,18,222	1/1:1,13:14:30.10:431,30,0	1/1:0,14:14:42.10:581,42,0	1/1:0,11:11:33.11:475,33,0	0/1:3,13:16:1.08:438,0,1	1/1:0,10:10:24.08:345,24,0	0/0:37,0:37:99:0,105,1261	1/1:3,15:18:42.14:605,42,0	1/1:1,20:21:60.20:863,60,0	1/1:0,7:7:21.07:299,21,0	1/1:0,17:17:42.14:605,42,0	1/1:0,4:4:12.04:173,12,0	1/1:1,9:10:21.07:299,21,0	1/1:3,23:26:60.20:864,60,0	1/1:0,7:7:21.07:302,21,0	0/0:10,0:10:30.09:0,30,372	0/0:16,0:16:42.13:0,42,520	0/0:8,0:8:24.08:0,24,297
chr10	14934301	.	G	GCGA	183.27	PASS	AB=0.919;AC=8;AF=0.222;AN=36;BaseQRankSum=0.065;DP=57;FS=18.799;HRun=0;HaplotypeScore=30.1453;InbreedingCoeff=-0.0647;MQ=113.06;MQ0=1;MQRankSum=0.130;QD=8.33;ReadPosRankSum=1.101;VQSLOD=0.4273;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:4:8.53:0,9,65	./.	0/0:9,0:7:13.68:0,14,149	0/0:8,0:7:17.41:0,17,192	./.	0/0:1,0:1:3.01:0,3,56	0/0:1,0:1:3.01:0,3,46	0/0:2,0:2:6.02:0,6,97	./.	0/0:1,0:1:3:0,3,26	./.	0/0:1,0:1:3:0,3,29	./.	0/0:0,1:1:0.47:0,0,1	0/1:5,0:5:63.78:64,0,66	0/1:2,0:2:17.84:18,0,37	0/0:2,0:2:3.01:0,3,56	1/1:2,0:2:6.01:64,6,0	./.	./.	0/1:3,2:5:0.06:0,0,0	0/0:1,0:1:2.97:0,3,20	0/1:2,0:2:13.69:50,0,14	0/1:3,1:4:30.21:30,0,90	0/1:2,0:2:24.34:63,0,24	./.	./.	./.
chr10	14934305	.	GGC	G	317.47	PASS	AB=0.889;AC=17;AF=0.500;AN=34;BaseQRankSum=0.431;DP=50;FS=1.737;HRun=0;HaplotypeScore=24.5261;InbreedingCoeff=0.2631;MQ=112.95;MQ0=1;MQRankSum=-1.777;QD=11.76;ReadPosRankSum=1.777;VQSLOD=3.1552;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,2:4:9.03:131,9,0	./.	0/0:8,0:5:3.71:0,4,103	0/0:8,0:7:13.43:0,13,148	0/0:1,0:1:3.01:0,3,55	0/0:1,0:1:2.99:0,3,24	./.	0/0:1,0:1:3.01:0,3,55	./.	0/0:1,0:1:3.01:0,3,52	./.	1/1:0,1:1:3.01:45,3,0	./.	0/0:1,0:1:2.96:0,3,19	0/1:4,0:4:7.74:8,0,9	0/1:2,0:2:2.88:3,0,13	./.	0/1:1,1:2:9.78:28,0,10	./.	./.	1/1:0,5:5:1.15:3,1,0	1/1:0,1:1:3.01:42,3,0	1/1:1,1:2:3.01:42,3,0	1/1:3,1:4:7.67:85,8,0	1/1:1,1:2:3.01:46,3,0	./.	./.	./.
chr10	14934393	.	AT	A	6873.24	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=12.612;DP=392;FS=12.306;HRun=1;HaplotypeScore=68.3220;InbreedingCoeff=0.9800;MQ=87.61;MQ0=0;MQRankSum=-2.472;QD=33.04;ReadPosRankSum=5.042;VQSLOD=3.4290;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,20:21:38.50:601,38,0	0/0:6,0:6:18.06:0,18,287	0/0:19,0:19:56.60:0,57,745	0/0:16,0:16:36.88:0,37,595	0/0:7,0:7:21.07:0,21,335	0/0:6,0:6:18.06:0,18,287	0/0:16,0:16:48.14:0,48,726	0/0:21,0:21:60.19:0,60,933	0/0:16,0:16:48.16:0,48,755	0/0:20,0:20:60.15:0,60,906	0/0:6,0:6:18.06:0,18,288	1/1:1,16:17:46.93:557,47,0	1/1:0,12:12:36.11:440,36,0	1/1:0,10:10:30.01:339,30,0	1/1:0,13:13:32.99:374,33,0	1/1:0,14:14:42.13:505,42,0	0/0:24,0:24:72.25:0,72,1149	1/1:0,19:19:57.14:687,57,0	1/1:0,12:12:33.08:391,33,0	1/1:1,22:23:63.20:784,63,0	1/1:0,27:27:63.20:783,63,0	1/1:0,7:7:21.07:262,21,0	1/1:0,13:13:36.10:429,36,0	1/1:0,7:7:21.06:252,21,0	1/1:0,13:13:39.12:470,39,0	0/0:18,0:18:48.16:0,48,767	0/0:7,0:7:21.07:0,21,335	0/0:2,0:2:6.02:0,6,96
chr10	14934994	.	ATCG	A	14672.45	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=16.054;DP=654;FS=27.082;HRun=0;HaplotypeScore=107.2708;InbreedingCoeff=0.9996;MQ=89.03;MQ0=0;MQRankSum=-6.399;QD=41.92;ReadPosRankSum=7.038;VQSLOD=3.5055;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,60:60:99:2392,141,0	0/0:11,0:11:27.09:0,27,622	0/0:28,0:28:81.26:0,81,1754	0/0:24,0:24:66.20:0,66,1447	0/0:17,0:17:51.18:0,51,1171	0/0:16,0:16:48.16:0,48,1102	0/0:28,0:28:84.29:0,84,1931	0/0:29,0:29:78.26:0,78,1705	0/0:25,0:25:69.24:0,69,1590	0/0:18,0:18:54.19:0,54,1244	0/0:15,0:15:42.13:0,42,899	1/1:1,10:11:24.08:409,24,0	1/1:0,22:22:57.20:972,57,0	1/1:1,25:26:75.26:1279,75,0	1/1:1,19:20:48.16:818,48,0	1/1:0,18:18:48.16:818,48,0	0/0:27,0:27:78.27:0,78,1797	1/1:0,18:18:42.14:716,42,0	1/1:3,17:20:48.11:761,48,0	1/1:0,18:18:48.16:806,48,0	1/1:4,37:41:84.27:1421,84,0	1/1:1,20:21:57.20:972,57,0	1/1:1,20:21:57.19:926,57,0	1/1:2,31:33:81.28:1382,81,0	1/1:1,20:21:60.20:1000,60,0	0/0:31,0:31:93.32:0,93,2125	0/0:21,0:21:63.22:0,63,1446	0/0:14,0:14:39.13:0,39,898
chr10	14935122	.	C	CTGTAATGT	16787.54	PASS	AB=0.619;AC=25;AF=0.446;AN=56;BaseQRankSum=13.572;DP=541;FS=2.419;HRun=0;HaplotypeScore=157.0657;InbreedingCoeff=0.7293;MQ=90.40;MQ0=0;MQRankSum=-14.931;QD=76.31;ReadPosRankSum=4.768;VQSLOD=5.0128;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:16,17:35:7.99:1926,8,0	0/0:6,0:6:18.06:0,18,545	0/0:25,0:25:75.26:0,75,2192	0/0:25,0:25:68.97:0,69,2006	0/0:29,0:29:87.27:0,87,2453	0/0:18,0:18:54.18:0,54,1501	0/0:24,0:24:72.25:0,72,2181	0/0:20,0:20:57.20:0,57,1719	0/0:23,0:23:69.24:0,69,2027	0/0:33,0:33:99:0,99,2841	0/0:20,0:20:60.21:0,60,1719	1/1:5,6:12:20.96:939,21,0	1/1:2,7:9:1.85:752,2,0	0/1:8,11:19:26.01:1318,0,26	1/1:5,18:23:29.39:1966,29,0	0/1:3,11:15:47.92:1342,0,48	0/0:40,0:40:99:0,120,3369	0/1:3,3:6:21.62:422,0,22	1/1:5,10:17:32.34:1468,32,0	1/1:4,15:20:34.86:1678,35,0	1/1:3,2:5:8.24:172,8,0	1/1:4,13:17:21.61:1222,22,0	1/1:3,11:14:18.23:1302,18,0	1/1:5,7:12:18.06:687,18,0	1/1:1,13:16:33.01:1593,33,0	0/0:26,0:26:75.26:0,75,2252	0/0:25,0:25:75.26:0,75,2204	0/0:7,0:7:21.07:0,21,636
chr10	14935123	.	C	CT	2873.75	PASS	AB=0.608;AC=20;AF=0.357;AN=56;BaseQRankSum=17.362;DP=553;FS=6.275;HRun=0;HaplotypeScore=137.5277;InbreedingCoeff=0.3960;MQ=90.38;MQ0=0;MQRankSum=-16.003;QD=12.89;ReadPosRankSum=5.617;VQSLOD=4.6927;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:21,17:38:20.55:369,0,21	0/0:6,0:6:18.06:0,18,252	0/0:26,0:26:75.24:0,75,1015	0/0:25,0:25:69.59:0,70,890	0/0:30,0:30:87.26:0,87,1182	0/0:18,0:18:54.17:0,54,737	0/0:24,0:24:72.24:0,72,1007	0/0:22,0:22:60.19:0,60,825	0/0:25,0:25:69.20:0,69,929	0/0:33,0:33:99:0,99,1364	0/0:20,0:20:60.20:0,60,838	0/1:4,7:11:14.61:142,0,15	0/1:2,7:9:17.65:123,0,18	0/1:9,11:20:26.54:235,0,27	0/1:5,18:23:12.29:360,0,12	0/1:4,11:15:13.93:228,0,14	0/0:40,0:40:99:0,117,1597	0/1:3,3:6:9.11:66,0,9	1/1:7,10:17:4.41:273,4,0	1/1:4,15:19:33.74:340,34,0	1/1:4,2:6:5.03:31,5,0	0/1:3,13:16:0.40:169,0,0	1/1:4,11:15:34.29:268,34,0	1/1:5,7:12:17.96:144,18,0	1/1:3,13:16:24.05:314,24,0	0/0:28,0:28:75.24:0,75,1034	0/0:26,0:26:75.21:0,75,996	0/0:7,0:7:21.07:0,21,293
chr10	14935303	.	T	TA	6691.61	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-10.477;DP=512;FS=1.145;HRun=8;HaplotypeScore=51.0643;InbreedingCoeff=0.9381;MQ=75.32;MQ0=0;MQRankSum=-2.567;QD=26.34;ReadPosRankSum=0.431;VQSLOD=5.4021;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,32:39:90.27:1033,90,0	0/0:5,0:5:12:0,12,110	0/0:11,0:12:16.79:0,17,131	0/0:7,0:8:7.41:0,7,74	0/0:23,0:23:60.03:0,60,549	0/0:19,0:19:51.03:0,51,467	0/0:15,0:15:39.01:0,39,357	0/0:29,0:28:51.96:0,52,602	0/0:12,0:12:36.02:0,36,329	0/0:21,0:21:57.03:0,57,522	0/0:14,1:15:1.58:0,2,267	1/1:2,12:14:33.09:375,33,0	1/1:0,9:9:21.06:242,21,0	1/1:0,15:15:45.13:516,45,0	1/1:4,16:20:17.70:452,18,0	1/1:2,13:15:36.11:415,36,0	0/0:32,0:32:84.04:0,84,768	1/1:1,21:22:57.17:657,57,0	1/1:4,27:30:75.18:841,75,0	1/1:2,13:15:39.05:432,39,0	1/1:2,11:14:36.11:415,36,0	1/1:4,5:9:9.03:104,9,0	1/1:7,10:17:24.07:274,24,0	1/1:1,14:15:36.11:416,36,0	1/1:1,18:19:45.13:519,45,0	0/0:28,0:28:75:0,75,676	0/0:22,0:22:10.56:0,11,345	0/0:17,0:17:48.03:0,48,438
chr10	14935488	.	A	AT	6487.81	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-6.282;DP=561;FS=2.437;HRun=9;HaplotypeScore=69.1905;InbreedingCoeff=0.9918;MQ=73.13;MQ0=0;MQRankSum=-1.637;QD=24.95;ReadPosRankSum=1.957;VQSLOD=5.7023;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,36:40:67.20:969,67,0	0/0:8,0:8:24:0,24,208	0/0:12,0:12:12.04:0,12,127	0/0:14,0:13:14.96:0,15,128	0/0:26,0:26:71.90:0,72,610	0/0:20,0:20:50.98:0,51,443	0/0:16,0:16:44.98:0,45,387	0/0:33,0:33:86.91:0,87,743	0/0:19,0:19:53.90:0,54,452	0/0:26,0:26:62.93:0,63,539	0/0:15,0:15:41.95:0,42,356	1/1:2,17:19:51.14:564,51,0	1/1:3,12:15:30.08:332,30,0	1/1:4,17:21:42.11:465,42,0	1/1:2,8:10:21.06:232,21,0	1/1:1,10:11:27.07:299,27,0	0/0:31,0:31:80.93:0,81,693	1/1:1,10:11:27.07:299,27,0	1/1:3,17:21:53.97:571,54,0	1/1:3,15:18:45.12:496,45,0	1/1:3,15:18:45.12:496,45,0	1/1:2,8:10:20.97:216,21,0	1/1:3,21:24:51.58:553,52,0	1/1:2,16:18:45.59:498,46,0	1/1:4,20:24:45.12:498,45,0	0/0:30,0:30:77.98:0,78,677	0/0:29,0:28:77.93:0,78,668	0/0:22,0:22:62.98:0,63,547
chr10	14935903	.	CTTTG	C	6984.13	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-5.810;DP=589;FS=1.184;HRun=0;HaplotypeScore=135.3483;InbreedingCoeff=0.9977;MQ=79.91;MQ0=4;MQRankSum=-3.094;QD=40.14;ReadPosRankSum=0.772;VQSLOD=4.8025;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:38:99:0,117,2858	1/1:0,7:7:18.06:335,18,0	0/0:24,0:22:47.32:0,47,1048	0/0:25,0:24:56.30:0,56,999	0/0:29,0:29:78.25:0,78,1963	0/0:25,0:25:72.20:0,72,1853	0/0:26,0:26:69.24:0,69,1804	1/1:2,15:16:42.09:649,42,0	1/1:0,21:21:42.14:779,42,0	1/1:0,23:24:72.12:1144,72,0	1/1:1,14:13:33.01:574,33,0	0/0:11,0:11:33.10:0,33,766	0/0:27,0:27:75.23:0,75,1883	0/0:23,0:23:69.24:0,69,1760	0/0:24,0:24:69.17:0,69,1716	0/0:12,0:12:30.10:0,30,727	1/1:4,24:28:45.15:837,45,0	0/0:21,0:21:60.21:0,60,1598	0/0:22,0:22:63.19:0,63,1494	0/0:16,0:16:48.16:0,48,1226	0/0:27,0:27:78.21:0,78,1839	0/0:11,0:11:33.11:0,33,844	0/0:10,0:10:27:0,27,603	0/0:20,0:19:60.17:0,60,1472	0/0:22,0:22:63.19:0,63,1483	1/1:2,23:25:66.20:1161,66,0	1/1:1,24:24:60.13:1113,60,0	1/1:3,9:10:21.07:392,21,0
chr10	14936082	.	AAAAT	A	4968.90	PASS	AB=1.000;AC=48;AF=0.857;AN=56;BaseQRankSum=-2.253;DP=472;FS=12.249;HRun=0;HaplotypeScore=98.6081;InbreedingCoeff=0.0734;MQ=57.87;MQ0=7;MQRankSum=2.609;QD=11.04;ReadPosRankSum=5.254;VQSLOD=3.1102;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:30:3:29,3,0	1/1:9,0:8:14.97:121,15,0	0/0:22,0:11:17.15:0,17,179	0/1:14,0:6:5.79:6,0,42	1/1:26,0:26:12.13:131,12,0	0/1:24,0:24:97.81:98,0,436	0/1:16,0:16:91:188,0,91	1/1:19,0:19:44.93:388,45,0	1/1:2,25:27:24.08:412,24,0	1/1:4,19:23:56.93:632,57,0	1/1:3,20:22:19.34:357,19,0	1/1:12,0:12:6.01:57,6,0	1/1:24,0:24:12.01:112,12,0	1/1:12,0:12:6.01:57,6,0	0/1:14,0:14:66.64:67,0,117	0/1:8,0:8:50.14:50,0,96	1/1:2,32:33:21.07:360,21,0	0/1:12,0:12:34.95:140,0,35	1/1:7,0:11:17.92:145,18,0	1/1:2,0:23:23.92:207,24,0	1/1:10,0:10:17.95:144,18,0	1/1:7,0:6:5.99:48,6,0	1/1:9,0:9:2.57:28,3,0	1/1:9,0:9:14.97:123,15,0	1/1:15,0:15:27.04:258,27,0	1/1:4,16:20:48.02:557,48,0	1/1:2,14:16:11.87:205,12,0	1/1:2,0:2:5.99:48,6,0
chr10	14936088	.	AATAAATAAATAC	A	3499.41	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=-0.174;DP=464;FS=6.207;HRun=0;HaplotypeScore=152.7911;InbreedingCoeff=0.4773;MQ=57.70;MQ0=7;MQRankSum=-6.427;QD=17.95;ReadPosRankSum=3.866;VQSLOD=2.2562;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:3,25:28:3.01:112,3,0	0/0:6,0:6:0.64:0,1,30	0/0:20,0:10:23.95:0,24,399	0/0:12,0:6:3.35:0,3,129	0/0:24,0:24:27.63:0,28,331	0/0:25,0:25:63.35:0,63,2387	0/0:19,0:19:35.46:0,35,1019	0/0:22,0:20:25.56:0,26,139	0/0:27,0:27:27.06:0,27,670	0/0:22,0:22:44.54:0,45,1178	0/0:23,0:22:59.73:0,60,929	1/1:0,11:11:6.02:225,6,0	1/1:2,19:21:12.04:446,12,0	1/1:1,11:12:6.02:225,6,0	0/1:10,0:15:99:162,0,602	0/1:8,0:12:99:120,0,553	0/0:34,0:33:27.08:0,27,699	0/1:12,0:12:99:197,0,291	1/1:10,0:9:23.09:202,23,0	0/1:22,0:22:32.10:48,0,32	0/1:12,0:12:99:174,0,247	1/1:4,1:5:9.01:119,9,0	1/1:0,10:10:11.36:211,11,0	1/1:9,0:9:20.68:249,21,0	1/1:1,15:16:27.09:1011,27,0	0/0:18,0:18:25.09:0,25,620	0/0:15,0:15:15.51:0,16,352	0/0:2,0:2:2.13:0,2,5
chr10	14936092	.	AATAAATAC	A	3771.44	PASS	AB=0.992;AC=35;AF=0.625;AN=56;BaseQRankSum=-2.905;DP=467;FS=14.333;HRun=0;HaplotypeScore=129.6309;InbreedingCoeff=0.0944;MQ=57.69;MQ0=6;MQRankSum=-0.800;QD=10.78;ReadPosRankSum=3.520;VQSLOD=1.5877;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:26:3.01:60,3,0	1/1:6,0:6:14.97:121,15,0	0/0:15,0:8:17.15:0,17,179	0/1:9,0:6:6.06:6,0,42	1/1:2,24:26:22.53:356,23,0	0/1:23,0:23:82.75:83,0,1311	0/1:20,0:20:99:170,0,536	1/1:25,0:23:44.67:387,45,0	0/0:26,0:26:23.65:0,24,149	0/1:23,0:23:99:149,0,312	0/0:25,0:24:30.94:0,31,249	1/1:11,0:11:6.02:120,6,0	1/1:19,0:19:12.04:236,12,0	1/1:11,0:11:6.02:120,6,0	0/1:16,0:16:62.88:63,0,440	0/1:13,0:13:43.91:44,0,411	0/0:35,0:34:26.66:0,27,223	0/1:13,0:13:86.42:86,0,184	0/1:13,0:12:46.06:218,0,46	0/1:25,0:25:25.12:388,0,25	0/1:11,0:11:75:75,0,150	1/1:4,0:4:5.99:48,6,0	1/1:10,0:10:11.74:119,12,0	1/1:8,0:8:14.98:146,15,0	1/1:15,0:15:27.09:538,27,0	0/1:19,0:19:99:192,0,205	0/0:16,0:16:14.82:0,15,99	1/1:2,0:2:5.99:48,6,0
chr10	14938254	.	AC	A	11516.53	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=15.773;DP=687;FS=18.173;HRun=3;HaplotypeScore=104.0820;InbreedingCoeff=0.9935;MQ=69.03;MQ0=2;MQRankSum=1.603;QD=32.53;ReadPosRankSum=6.946;VQSLOD=2.8933;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,40:42:99:1362,111,0	0/0:13,0:13:36.12:0,36,516	0/0:45,0:38:99:0,102,1330	0/0:30,0:27:66.21:0,66,878	0/0:13,0:12:30.08:0,30,412	0/0:30,0:30:84.25:0,84,1158	0/0:40,0:39:99:0,108,1506	0/0:34,0:34:99:0,99,1408	0/0:22,0:22:63.21:0,63,905	0/0:21,0:21:60.20:0,60,863	0/0:8,0:8:21.07:0,21,302	1/1:1,25:26:66.21:818,66,0	1/1:1,18:19:54.17:669,54,0	1/1:0,27:27:78.25:967,78,0	1/1:1,22:23:66.21:818,66,0	1/1:2,18:20:14.06:626,14,0	0/0:37,0:37:99:0,108,1529	1/1:1,27:28:57.65:875,58,0	1/1:2,7:9:21.07:260,21,0	1/1:2,4:6:15.03:173,15,0	1/1:5,70:75:99:2306,186,0	1/1:0,11:11:33.10:409,33,0	1/1:2,11:13:30.09:372,30,0	1/1:1,36:37:99:1227,99,0	1/1:0,18:18:51.16:632,51,0	0/0:19,0:19:57.19:0,57,817	0/0:13,0:12:36.10:0,36,497	0/0:8,0:8:24.08:0,24,335
chr10	14938528	.	G	GAA	2683.40	PASS	AB=0.961;AC=29;AF=0.518;AN=56;BaseQRankSum=-0.041;DP=497;FS=0.000;HRun=14;HaplotypeScore=86.9431;InbreedingCoeff=0.6175;MQ=54.64;MQ0=15;MQRankSum=0.347;QD=8.11;ReadPosRankSum=-3.920;VQSLOD=0.3346;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:14,21:37:23.56:281,24,0	0/0:5,0:5:2.92:0,3,25	0/1:23,0:8:1.61:2,0,74	0/0:31,0:3:5.94:0,6,43	0/0:11,0:12:9.20:0,9,57	0/0:6,0:6:5.93:0,6,49	0/0:21,0:23:36.73:0,37,287	0/0:14,0:15:12.75:0,13,140	0/0:17,0:16:20.53:0,21,182	0/0:17,0:18:5.38:0,5,78	0/1:11,0:11:2.39:2,0,63	1/1:16,3:19:17.90:149,18,0	1/1:23,4:27:39.87:315,40,0	1/1:14,2:17:24.42:176,24,0	1/1:14,3:20:27.46:183,27,0	1/1:11,4:15:23.95:231,24,0	0/0:18,0:20:35.12:0,35,274	1/1:8,17:28:9.03:205,9,0	0/1:11,0:12:30.18:83,0,30	1/1:3,5:10:11.99:137,12,0	0/1:13,0:14:22.79:36,0,23	1/1:17,6:23:41.57:405,42,0	1/1:14,1:17:17.28:136,17,0	1/1:19,3:22:27.02:290,27,0	1/1:9,4:13:23.99:249,24,0	0/1:16,0:16:0.45:0,0,42	0/0:8,0:8:14.93:0,15,123	0/0:4,0:5:5.67:0,6,37
chr10	14938547	.	TCA	T	787.52	PASS	AB=0.962;AC=16;AF=0.308;AN=52;BaseQRankSum=4.596;DP=475;FS=5.068;HRun=0;HaplotypeScore=83.5216;InbreedingCoeff=0.5766;MQ=48.99;MQ0=17;MQRankSum=3.089;QD=6.06;ReadPosRankSum=2.204;VQSLOD=2.6256;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:27:21.07:0,21,266	0/0:8,0:8:3.01:0,3,38	./.	./.	0/0:15,0:12:2.17:0,2,24	0/0:17,0:15:5.99:0,6,48	0/0:30,0:29:11.98:0,12,113	0/0:19,0:16:20.73:0,21,139	0/0:17,0:16:8.96:0,9,69	0/0:18,0:17:32.27:0,32,222	0/0:12,0:12:3:0,3,26	1/1:14,1:13:6.01:62,6,0	1/1:12,3:15:11.77:113,12,0	1/1:6,2:8:5.85:47,6,0	0/0:13,0:13:15.05:0,15,183	0/1:11,1:12:18.61:19,0,140	0/0:26,0:26:14.94:0,15,128	0/0:19,0:18:12.02:0,12,134	0/1:13,0:11:9.04:9,0,92	0/0:9,0:9:1.81:0,2,110	0/0:19,0:18:18.06:0,18,230	1/1:12,4:17:14.87:149,15,0	1/1:9,6:16:17.88:182,18,0	1/1:12,9:21:23.90:246,24,0	1/1:8,4:11:12.03:135,12,0	0/0:28,0:26:52.22:0,52,404	0/0:11,0:11:5.96:0,6,44	0/0:7,0:6:3.01:0,3,38
chr10	14938582	.	C	CACACACACACACAG	6234.95	PASS	AB=1.000;AC=34;AF=0.607;AN=56;BaseQRankSum=-7.494;DP=498;FS=5.080;HRun=0;HaplotypeScore=193.9989;InbreedingCoeff=-0.2266;MQ=72.02;MQ0=7;MQRankSum=-0.756;QD=14.60;ReadPosRankSum=-5.398;VQSLOD=2.1160;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:37,0:36:99:425,0,531	1/1:7,0:7:11.95:92,12,0	0/0:18,0:11:26.62:0,27,211	0/0:20,0:19:14.04:0,14,245	0/1:14,0:13:71.78:72,0,121	0/1:19,0:19:44.09:44,0,182	0/0:33,0:33:37.35:0,37,436	1/1:11,0:10:26.92:303,27,0	1/1:16,0:16:41.20:505,41,0	1/1:11,0:11:33:379,33,0	1/1:0,8:12:2.77:212,3,0	0/1:21,0:21:57.67:300,0,58	0/1:12,0:12:99:149,0,280	0/1:12,0:12:99:175,0,127	0/1:14,0:14:99:174,0,380	0/1:17,0:17:99:233,0,204	1/1:25,0:25:65.34:694,65,0	0/1:23,0:23:99:259,0,183	0/1:22,0:21:99:334,0,184	0/1:12,0:12:99:114,0,130	0/1:39,0:38:99:376,0,420	0/1:12,0:12:99:109,0,335	0/1:17,0:17:99:153,0,403	0/1:22,0:22:99:171,0,454	0/1:14,0:14:99:201,0,157	1/1:21,0:21:56.70:492,57,0	1/1:8,0:8:17.97:153,18,0	1/1:8,0:7:16.47:118,16,0
chr10	14940506	.	G	GGGA	3964.01	PASS	AC=28;AF=0.538;AN=52;BaseQRankSum=0.297;DP=227;FS=15.684;HRun=0;HaplotypeScore=53.4829;InbreedingCoeff=0.8151;MQ=107.03;MQ0=4;MQRankSum=-4.604;QD=36.70;ReadPosRankSum=4.926;VQSLOD=2.7626;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,12:12:24.08:488,24,0	0/0:3,0:3:9.03:0,9,147	0/0:33,0:23:13.72:0,14,442	0/0:42,0:29:22.96:0,23,477	0/0:3,0:3:6.02:0,6,98	0/0:5,0:5:12.04:0,12,196	0/0:8,0:8:21.04:0,21,289	./.	0/0:4,0:4:9.03:0,9,147	0/0:5,0:5:11.94:0,12,195	0/0:3,0:3:9.03:0,9,141	1/1:0,9:9:21.07:452,21,0	1/1:2,4:7:12.03:233,12,0	1/1:1,4:5:9.03:194,9,0	1/1:1,5:6:9.01:192,9,0	1/1:1,7:8:15.05:323,15,0	0/0:2,0:2:6.02:0,6,98	1/1:1,7:8:15.05:271,15,0	1/1:1,6:7:21.07:429,21,0	1/1:2,2:4:3.01:64,3,0	1/1:2,12:14:16.16:326,16,0	1/1:0,7:8:21.07:422,21,0	1/1:0,6:6:6.02:128,6,0	1/1:1,6:7:4.11:249,4,0	1/1:0,5:6:9.03:195,9,0	0/0:4,0:4:9.03:0,9,143	0/0:4,0:4:12.04:0,12,192	./.
chr10	14942382	.	T	TCA	221.59	PASS	AB=0.988;AC=14;AF=0.304;AN=46;BaseQRankSum=1.901;DP=480;FS=6.680;HRun=0;HaplotypeScore=105.0966;InbreedingCoeff=0.1771;MQ=63.44;MQ0=13;MQRankSum=-1.658;QD=1.43;ReadPosRankSum=-3.492;VQSLOD=0.6277;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:27:10.81:0,11,40	0/0:9,0:9:2.21:0,2,11	./.	./.	0/1:13,0:13:10.66:53,0,11	0/1:12,1:12:21.25:80,0,21	./.	./.	./.	1/1:16,0:16:2.60:6,3,0	0/0:11,0:10:0:0,0,0	0/0:6,0:6:2.74:0,3,13	0/0:10,0:11:5.41:0,5,25	0/0:12,0:12:7.62:0,8,30	0/1:25,0:25:12.08:15,0,12	0/1:18,0:18:3.08:56,0,3	0/0:35,0:35:6.29:0,6,26	0/1:15,0:14:2.13:40,0,2	1/1:10,0:10:3.01:32,3,0	1/1:14,0:14:4.78:26,5,0	0/0:25,0:22:5.99:0,6,53	0/0:11,0:10:3.74:0,4,28	0/0:9,0:9:10.42:0,10,48	0/0:28,0:28:33.29:0,33,178	0/0:13,0:13:3.86:0,4,23	1/1:18,0:18:3.70:24,4,0	0/1:12,0:12:5.91:18,0,6	0/0:6,0:6:5.36:0,5,22
chr10	14942423	.	CAT	C	4209.09	PASS	AB=0.827;AC=38;AF=0.679;AN=56;BaseQRankSum=1.572;DP=623;FS=15.453;HRun=0;HaplotypeScore=109.6000;InbreedingCoeff=0.3016;MQ=50.38;MQ0=19;MQRankSum=3.694;QD=7.93;ReadPosRankSum=-2.222;VQSLOD=1.6913;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:36,0:35:65.57:465,66,0	1/1:10,0:10:23.96:197,24,0	0/1:22,0:7:12.78:13,0,46	0/1:28,0:11:9.84:10,0,80	0/0:16,0:16:38.86:0,39,362	0/0:22,0:21:7.77:0,8,323	0/0:23,0:22:18.50:0,19,206	1/1:8,16:23:7.42:287,7,0	0/1:5,29:34:0:0,0,0	1/1:0,23:23:49.44:369,49,0	1/1:3,11:13:4.69:25,5,0	1/1:16,0:16:2.91:141,3,0	0/1:5,17:22:31.63:43,0,32	1/1:19,1:19:34.12:223,34,0	1/1:25,0:25:7:71,7,0	0/1:18,0:17:12.44:27,0,12	0/1:2,31:33:3.48:122,0,3	1/1:10,0:9:0.48:71,0,0	0/0:12,0:12:18.12:0,18,137	0/1:20,0:20:12.20:33,0,12	0/0:19,0:11:7.83:0,8,43	1/1:23,0:20:32.85:261,33,0	0/1:29,0:29:10.54:182,0,11	1/1:36,2:38:6.52:387,7,0	1/1:19,0:19:16.25:200,16,0	1/1:3,26:28:53.86:421,54,0	1/1:27,1:27:70.22:571,70,0	1/1:1,8:9:6:91,6,0
chr10	14942688	.	ATG	A	41.02	PASS	AB=0.929;AC=8;AF=0.154;AN=52;BaseQRankSum=4.978;DP=521;FS=4.922;HRun=0;HaplotypeScore=74.8452;InbreedingCoeff=0.6132;MQ=64.83;MQ0=0;MQRankSum=-2.708;QD=1.21;ReadPosRankSum=-2.082;VQSLOD=1.0901;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,123,2273	0/0:7,0:7:21.07:0,21,426	0/1:10,2:10:35.32:35,0,110	0/1:10,0:5:1.50:1,0,42	0/0:10,0:10:30.10:0,30,587	0/0:21,0:21:63.22:0,63,1246	0/0:39,0:39:99:0,114,2131	0/0:24,0:24:67.46:0,67,1245	0/0:29,0:29:84.28:0,84,1645	0/0:25,0:25:75.26:0,75,1482	0/0:10,0:10:27.09:0,27,511	0/0:29,0:29:81.28:0,81,1645	0/0:25,0:25:75.21:0,75,1448	0/0:28,0:28:78.27:0,78,1497	1/1:5,0:5:2.74:12,3,0	./.	0/0:23,0:23:66.23:0,66,1297	1/1:3,0:3:5.93:40,6,0	1/1:3,0:3:8.89:73,9,0	./.	0/0:5,1:5:0:0,0,0	0/0:19,0:19:54.16:0,54,998	0/0:18,0:18:45.15:0,45,871	0/0:45,0:45:99:0,123,2440	0/0:22,0:22:63.22:0,63,1259	0/0:24,0:24:72.23:0,72,1348	0/0:27,0:27:81.26:0,81,1582	0/0:10,0:10:27.09:0,27,528
chr10	14942782	.	TACACACACACACACAC	T	3980.61	PASS	AB=0.710;AC=20;AF=0.370;AN=54;BaseQRankSum=8.338;DP=523;FS=3.696;HRun=0;HaplotypeScore=217.8438;InbreedingCoeff=0.6728;MQ=57.46;MQ0=10;MQRankSum=-7.311;QD=19.23;ReadPosRankSum=-0.756;VQSLOD=2.3366;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:13,3:14:2.97:20,3,0	0/0:7,0:10:15.05:0,15,907	0/0:30,0:20:18.06:0,18,749	0/0:32,0:21:27.09:0,27,961	0/0:13,0:16:12.04:0,12,326	0/0:13,0:15:30.09:0,30,660	0/0:25,0:36:49.35:0,49,1037	0/0:19,0:19:15.05:0,15,944	0/0:17,0:20:36.12:0,36,2276	0/0:14,0:14:27.09:0,27,1062	0/0:4,0:4:6.02:0,6,242	1/1:10,9:20:24.08:1041,24,0	1/1:7,3:9:9.03:398,9,0	1/1:12,13:24:24.06:1062,24,0	1/1:10,0:19:4.70:273,5,0	1/1:7,1:11:8.99:163,9,0	0/0:34,0:37:72.25:0,72,4379	0/1:9,0:13:29.03:202,0,29	0/0:13,0:13:11.97:0,12,244	0/0:5,1:12:6:0,6,51	1/1:31,0:38:2.99:25,3,0	1/1:12,1:14:2.61:111,3,0	1/1:6,4:10:5.98:153,6,0	0/1:15,12:27:2.58:533,0,3	./.	0/0:23,0:23:38.16:0,38,1791	0/0:12,0:13:33.11:0,33,1799	0/0:8,0:7:9.03:0,9,451
chr10	14943755	.	TTCCTCTCCTCTTCCC	T	12822.93	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=1.501;DP=619;FS=17.071;HRun=0;HaplotypeScore=218.9449;InbreedingCoeff=0.5846;MQ=76.86;MQ0=6;MQRankSum=-1.778;QD=26.17;ReadPosRankSum=4.764;VQSLOD=2.2792;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:24,25:49:18.06:606,18,0	1/1:2,3:5:6.02:237,6,0	0/0:42,0:23:4.71:0,5,122	0/0:54,0:33:18.90:0,19,185	1/1:11,5:15:8.99:250,9,0	1/1:8,13:21:18.06:712,18,0	1/1:22,0:22:12.04:314,12,0	1/1:36,0:35:12.04:238,12,0	1/1:10,13:23:15.05:621,15,0	1/1:14,9:23:24.05:662,24,0	1/1:4,6:10:8.99:268,9,0	1/1:12,12:24:21.07:858,21,0	1/1:6,6:12:3.01:124,3,0	1/1:9,10:19:15.05:621,15,0	1/1:3,11:14:20.94:851,21,0	1/1:10,16:26:29.91:1240,30,0	1/1:14,12:26:18.06:743,18,0	1/1:8,10:18:9.03:244,9,0	1/1:12,3:15:9.03:291,9,0	1/1:12,9:21:21.07:696,21,0	0/0:32,0:32:2.49:0,2,6	1/1:6,7:13:17.93:401,18,0	1/1:8,5:13:9.03:359,9,0	1/1:10,12:21:6.02:248,6,0	1/1:10,6:15:3.01:124,3,0	1/1:7,13:20:36.08:871,36,0	1/1:8,11:19:24.08:988,24,0	1/1:3,4:7:8.52:257,9,0
chr10	14943784	.	CCTCCT	C	3651.93	PASS	AB=0.991;AC=27;AF=0.482;AN=56;BaseQRankSum=13.477;DP=620;FS=2.627;HRun=0;HaplotypeScore=132.1396;InbreedingCoeff=-0.6556;MQ=54.83;MQ0=27;MQRankSum=-6.568;QD=8.23;ReadPosRankSum=12.846;VQSLOD=-0.3076;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:46,1:46:99:196,0,697	0/1:8,0:8:75.50:76,0,255	0/0:66,0:10:18.92:0,19,293	0/0:78,0:19:29.61:0,30,391	0/1:14,0:13:47.76:48,0,657	0/1:22,0:22:99:221,0,402	0/1:20,1:19:99:123,0,757	0/1:22,4:24:99:146,0,836	0/1:19,0:19:99:144,0,248	0/1:20,0:19:99:207,0,605	0/1:10,0:10:71.34:71,0,146	0/1:17,0:17:99:227,0,207	0/1:11,0:10:27.22:27,0,43	0/1:14,0:14:99:147,0,142	0/1:22,0:20:99:217,0,708	0/1:18,0:18:99:297,0,145	0/1:26,0:26:99:184,0,637	0/1:19,0:19:78.40:78,0,288	0/1:13,0:11:86.40:86,0,430	1/1:13,0:13:21.06:269,21,0	0/0:18,9:27:25.25:0,25,401	0/1:17,0:17:99:133,0,745	0/1:7,0:7:88.14:88,0,166	0/1:25,0:25:33.33:33,0,696	0/1:11,0:10:24.19:24,0,132	0/1:20,0:20:99:277,0,652	0/1:18,0:18:99:256,0,440	1/1:6,0:6:8.51:76,9,0
chr10	14944259	.	GA	G	1021.53	PASS	AB=0.865;AC=15;AF=0.268;AN=56;BaseQRankSum=6.472;DP=399;FS=6.995;HRun=12;HaplotypeScore=48.4372;InbreedingCoeff=0.4953;MQ=68.29;MQ0=9;MQRankSum=-0.693;QD=7.14;ReadPosRankSum=1.190;VQSLOD=1.4863;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,1:36:57.61:0,58,719	0/0:1,0:1:3.01:0,3,30	0/1:15,0:6:4.32:4,0,73	0/1:10,2:8:17.11:51,0,17	0/0:10,0:10:18.02:0,18,176	0/0:13,0:12:36.04:0,36,354	0/0:17,1:17:15.84:0,16,336	0/1:11,1:13:2.36:2,0,145	0/0:9,0:8:12.02:0,12,121	0/0:8,0:9:20.87:0,21,192	0/0:8,0:8:18.03:0,18,178	0/1:9,1:13:16.46:16,0,122	0/0:6,0:6:18.02:0,18,174	0/0:10,0:10:27.04:0,27,269	0/1:3,6:8:12.51:98,0,13	1/1:5,4:9:11.90:93,12,0	0/0:26,1:28:51.65:0,52,664	1/1:4,17:21:44.76:348,45,0	1/1:9,10:21:4.41:204,4,0	1/1:2,14:17:28.86:215,29,0	1/1:1,10:11:20.92:163,21,0	0/0:14,0:14:26.99:0,27,257	0/0:13,0:15:29.71:0,30,260	0/0:18,1:19:48.55:0,49,482	0/0:15,1:17:29.10:0,29,321	0/0:19,0:19:21.99:0,22,403	0/0:11,1:12:0.80:0,1,184	0/0:10,0:11:23.88:0,24,227
chr10	14944651	.	A	AGTGT	3193.68	PASS	AB=0.848;AC=25;AF=0.694;AN=36;BaseQRankSum=-3.421;DP=519;FS=16.010;HRun=0;HaplotypeScore=98.7986;InbreedingCoeff=0.2826;MQ=66.94;MQ0=9;MQRankSum=2.283;QD=10.30;ReadPosRankSum=1.081;VQSLOD=1.9397;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	1/1:3,1:9:8.76:123,9,0	./.	./.	1/1:10,5:17:5.99:142,6,0	0/1:6,6:16:15.94:201,0,16	1/1:14,11:31:22.58:259,23,0	0/1:29,0:28:8.02:34,0,8	1/1:10,15:28:26.07:578,26,0	1/1:13,11:28:33.03:474,33,0	0/1:3,1:12:38.35:75,0,38	./.	0/0:14,0:14:5.88:0,6,43	./.	0/1:9,0:9:0:0,0,0	./.	1/1:15,15:37:23.82:510,24,0	0/0:16,0:15:0.59:0,1,5	1/1:13,0:9:4.20:23,4,0	./.	./.	./.	./.	0/1:20,0:20:0:0,0,0	0/0:10,0:10:3:0,3,28	1/1:16,14:32:23.06:569,23,0	1/1:3,8:15:14.52:238,15,0	1/1:5,6:12:5.75:83,6,0
chr10	14944666	.	GTGTGTGTGTGTGTGT	G	359.24	PASS	AB=0.667;AC=11;AF=0.196;AN=56;BaseQRankSum=4.548;DP=423;FS=1.258;HRun=0;HaplotypeScore=150.8516;InbreedingCoeff=0.6731;MQ=53.96;MQ0=12;MQRankSum=-1.446;QD=12.83;ReadPosRankSum=-1.380;VQSLOD=2.1233;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:10,0:10:11.20:77,11,0	0/0:7,0:7:12.04:0,12,605	0/0:30,0:13:30.07:0,30,755	0/0:26,0:15:45.15:0,45,1212	0/0:17,0:16:16.44:0,16,770	0/0:16,0:16:30.07:0,30,1300	0/0:32,0:32:51.81:0,52,2254	0/0:26,0:25:75.24:0,75,3000	0/0:28,0:28:47.57:0,48,2437	0/0:29,0:27:72.25:0,72,3201	0/0:15,0:15:18.06:0,18,1004	0/1:1,1:2:0:0,0,0	1/1:3,2:5:9.42:251,9,0	1/1:2,0:2:2.63:25,3,0	0/0:6,0:6:0:0,0,0	0/0:6,0:6:3.01:0,3,71	0/0:33,0:33:48.16:0,48,2645	0/0:18,0:16:37.94:0,38,801	0/0:11,0:7:20.99:0,21,420	0/0:6,0:6:6.02:0,6,77	0/0:25,0:25:15.05:0,15,282	0/0:1,0:1:2.80:0,3,13	0/0:2,0:1:0.47:0,0,1	1/1:6,1:7:2.74:31,3,0	1/1:2,0:2:3.01:111,3,0	0/0:33,0:32:93.30:0,93,4263	0/0:17,0:17:30.10:0,30,1479	0/0:11,0:11:18.06:0,18,711
chr10	14944688	.	GGGCA	G	658.10	PASS	AB=0.955;AC=12;AF=0.222;AN=54;BaseQRankSum=2.354;DP=420;FS=12.978;HRun=0;HaplotypeScore=101.3113;InbreedingCoeff=0.1506;MQ=53.19;MQ0=8;MQRankSum=-1.880;QD=4.19;ReadPosRankSum=-1.045;VQSLOD=0.9732;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:24.97:0,25,370	0/1:8,0:8:9.76:10,0,367	0/0:28,0:15:22.29:0,22,716	0/0:23,0:14:21.40:0,21,706	0/0:10,0:10:15.67:0,16,280	0/0:14,0:14:27.09:0,27,588	0/1:30,0:31:20.68:21,0,926	0/0:25,0:25:75.21:0,75,1861	0/1:25,0:26:41.87:42,0,664	0/1:27,0:25:99:124,0,1081	0/0:15,0:15:20.93:0,21,413	0/0:13,0:13:16.20:0,16,255	0/0:8,0:8:14.85:0,15,190	0/0:13,0:13:15.60:0,16,277	0/1:3,4:7:0:0,0,0	0/0:0,4:4:0.47:0,0,1	0/0:31,0:31:48.13:0,48,963	1/1:6,6:10:21.02:379,21,0	1/1:2,0:2:6.02:98,6,0	./.	0/0:1,14:15:0.47:0,0,1	0/0:2,0:2:3.01:0,3,71	0/0:6,0:6:6:0,6,109	0/1:15,0:15:8.91:9,0,54	0/0:13,0:13:17.25:0,17,276	0/1:20,0:19:99:105,0,964	0/0:18,0:18:1.92:0,2,663	0/1:9,0:9:12.33:12,0,157
chr10	14944697	.	TGCATGCGTGCGCGA	T	847.25	PASS	AB=0.571;AC=7;AF=0.125;AN=56;BaseQRankSum=4.917;DP=437;FS=20.271;HRun=0;HaplotypeScore=165.8763;InbreedingCoeff=0.6729;MQ=55.91;MQ0=4;MQRankSum=-4.559;QD=24.21;ReadPosRankSum=0.043;VQSLOD=1.6581;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:43.13:0,43,2283	0/0:10,0:10:25.90:0,26,1362	0/0:27,0:18:41.87:0,42,1637	0/0:29,0:17:45.10:0,45,1427	0/0:9,0:9:15.52:0,16,931	0/0:14,0:14:27.09:0,27,1566	0/0:24,0:25:49.79:0,50,2793	0/0:27,0:27:75.26:0,75,3888	0/0:24,0:24:45.21:0,45,2411	0/0:24,0:23:57.17:0,57,3356	0/0:12,0:12:21.07:0,21,1227	0/0:15,0:15:17.90:0,18,912	0/0:14,0:14:29.38:0,29,1165	0/0:18,0:18:29.48:0,29,1429	0/0:4,3:7:0.47:0,0,1	0/1:1,3:4:0:0,0,0	0/0:29,0:29:54.19:0,54,3122	1/1:7,5:11:21.54:782,22,0	1/1:0,3:3:9.01:176,9,0	0/0:3,1:4:0:0,0,0	1/1:16,0:16:0.45:1,0,0	0/0:2,0:2:3.01:0,3,188	0/0:8,0:8:8.35:0,8,442	0/0:16,0:16:2.62:0,3,138	0/0:17,0:17:26.88:0,27,1221	0/0:20,0:20:60.16:0,60,3248	0/0:16,0:16:35.78:0,36,2253	0/0:3,0:3:9.03:0,9,532
chr10	14944698	.	GCA	G	146.26	PASS	AB=0.768;AC=7;AF=0.130;AN=54;BaseQRankSum=4.882;DP=440;FS=18.354;HRun=0;HaplotypeScore=101.5545;InbreedingCoeff=0.6736;MQ=57.54;MQ0=3;MQRankSum=-3.194;QD=3.85;ReadPosRankSum=2.110;VQSLOD=0.7535;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:41.31:0,41,811	0/0:10,0:10:22.17:0,22,444	0/0:29,0:19:42.26:0,42,770	0/0:31,0:19:48.11:0,48,808	0/0:8,0:8:15.49:0,15,292	0/0:14,0:14:27.09:0,27,548	0/0:26,0:26:56.92:0,57,1089	0/0:29,0:29:77.77:0,78,1557	0/0:25,0:25:47.97:0,48,876	0/0:23,0:23:57.19:0,57,1102	0/0:12,0:12:20.90:0,21,424	0/0:15,0:15:17.90:0,18,351	0/0:14,0:14:31.35:0,31,586	0/0:19,0:19:33.08:0,33,615	0/1:3,2:5:0:0,0,0	0/1:3,1:4:0:0,0,0	0/0:29,0:29:54.19:0,54,1071	1/1:10,1:10:16.96:211,17,0	1/1:3,0:3:3.01:39,3,0	./.	0/1:11,4:15:0.03:0,0,0	0/0:2,0:2:3.01:0,3,61	0/0:8,0:8:8.36:0,8,181	0/0:17,0:18:11.21:0,11,202	0/0:17,0:17:26.76:0,27,511	0/0:20,0:20:60.16:0,60,1154	0/0:16,0:16:36.12:0,36,719	0/0:3,0:3:9.03:0,9,174
chr10	14945923	.	CT	C	1124.22	PASS	AB=0.791;AC=26;AF=0.464;AN=56;BaseQRankSum=-4.678;DP=505;FS=8.642;HRun=18;HaplotypeScore=87.4711;InbreedingCoeff=0.5560;MQ=50.81;MQ0=11;MQRankSum=2.862;QD=3.88;ReadPosRankSum=3.125;VQSLOD=0.1449;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:21:35.43:0,35,212	0/1:4,2:6:11.85:26,0,12	0/0:17,1:9:9.51:0,10,46	0/1:9,1:4:5.99:10,0,6	0/0:12,0:13:17.67:0,18,101	0/0:7,0:16:20.03:0,20,106	0/0:15,0:18:28.99:0,29,154	1/1:16,9:25:25.98:139,26,0	0/1:12,5:18:3.63:68,0,4	1/1:12,6:20:28.08:130,28,0	1/1:7,5:18:26.14:111,26,0	0/0:17,0:16:15.42:0,15,92	0/0:19,0:16:24.62:0,25,129	0/0:18,0:16:23.40:0,23,142	1/1:11,5:16:0.68:79,1,0	1/1:6,6:11:18.89:92,19,0	1/1:31,3:34:20.60:171,21,0	1/1:16,7:22:27.59:134,28,0	0/1:20,1:19:29.67:53,0,30	0/1:9,5:13:1.29:70,0,1	1/1:9,0:10:4.58:21,5,0	0/0:10,0:12:17.14:0,17,92	0/0:13,0:14:16.92:0,17,75	0/0:9,0:10:2.34:0,2,13	0/0:15,0:18:26.49:0,26,129	1/1:11,7:18:20.94:104,21,0	1/1:10,2:14:15.49:80,15,0	0/1:8,5:13:10.41:36,0,10
chr10	14945946	.	CT	C	1994.98	PASS	AB=0.649;AC=27;AF=0.500;AN=54;BaseQRankSum=0.319;DP=452;FS=1.803;HRun=8;HaplotypeScore=68.5113;InbreedingCoeff=0.8110;MQ=47.21;MQ0=13;MQRankSum=-1.357;QD=9.32;ReadPosRankSum=-0.043;VQSLOD=1.6333;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:12,7:14:3.93:105,4,0	0/0:11,0:11:15.01:0,15,166	0/0:5,0:3:0:0,0,0	./.	0/0:13,0:11:13.81:0,14,149	0/0:20,0:18:21.32:0,21,231	0/0:18,0:16:27.31:0,27,257	0/0:24,0:20:27.86:0,28,293	0/0:18,0:18:31.88:0,32,343	0/0:21,0:19:36.11:0,36,435	0/0:17,0:15:21.06:0,21,252	1/1:6,8:14:9.05:213,9,0	1/1:3,16:17:39.10:399,39,0	0/1:11,13:22:28.33:247,0,28	1/1:11,6:15:11.53:114,12,0	1/1:8,4:11:11.93:109,12,0	0/0:40,0:37:61.37:0,61,650	1/1:15,6:18:17.61:154,18,0	1/1:11,5:13:16.75:169,17,0	1/1:5,8:12:11.91:116,12,0	1/1:4,6:10:12.01:115,12,0	1/1:5,5:9:15:145,15,0	1/1:6,5:10:9:86,9,0	1/1:7,3:8:5.62:58,6,0	1/1:9,9:14:17.28:172,17,0	0/0:20,0:18:42.13:0,42,507	0/0:14,0:14:26.92:0,27,258	0/0:15,0:14:12.04:0,12,145
chr10	14947472	.	CTGTGTGTGTG	C	2627.30	PASS	AB=0.700;AC=15;AF=0.288;AN=52;BaseQRankSum=5.216;DP=637;FS=4.595;HRun=0;HaplotypeScore=193.5491;InbreedingCoeff=0.7883;MQ=69.48;MQ0=20;MQRankSum=-8.847;QD=17.63;ReadPosRankSum=0.218;VQSLOD=2.5733;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:25,7:32:2.67:89,3,0	0/0:6,0:9:21.07:0,21,835	./.	./.	0/0:12,0:12:24.89:0,25,975	0/0:19,0:20:21.07:0,21,823	0/0:31,0:42:40.41:0,40,2032	0/0:26,0:25:21.43:0,21,540	0/0:26,0:27:48.16:0,48,2124	0/0:19,0:19:24.54:0,25,697	0/0:8,0:8:12.04:0,12,484	1/1:12,7:19:20.70:600,21,0	1/1:5,8:14:24.08:694,24,0	1/1:11,5:16:18.06:515,18,0	0/0:6,0:16:23.67:0,24,652	0/0:8,0:17:18.06:0,18,469	0/0:32,0:34:84.26:0,84,3349	0/0:14,0:31:56.78:0,57,1342	0/0:21,0:24:16.86:0,17,308	0/0:10,0:12:12.04:0,12,294	0/0:55,0:61:65.53:0,66,1859	1/1:14,6:21:6.02:179,6,0	1/1:5,2:7:6.02:178,6,0	1/1:15,6:22:6.02:140,6,0	0/1:8,5:13:36.62:409,0,37	0/0:18,0:19:34.83:0,35,1283	0/0:15,0:14:21.54:0,22,716	0/0:8,0:9:18.06:0,18,765
chr10	14948504	.	C	CG	2486.33	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=-9.422;DP=486;FS=1.618;HRun=1;HaplotypeScore=75.5118;InbreedingCoeff=0.8600;MQ=58.11;MQ0=10;MQRankSum=-0.178;QD=24.62;ReadPosRankSum=1.495;VQSLOD=3.7231;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,113,1348	0/0:10,0:9:27.05:0,27,294	0/1:7,0:4:3.43:3,0,52	0/0:7,0:2:2.04:0,2,6	0/0:20,0:20:57.15:0,57,689	0/0:19,0:19:44.12:0,44,650	0/0:20,0:19:42.07:0,42,522	0/0:25,0:25:65.95:0,66,676	0/0:12,0:11:33.07:0,33,375	0/0:21,0:21:54.07:0,54,627	0/0:15,0:13:37.94:0,38,316	0/0:7,0:7:18.04:0,18,199	0/0:12,0:12:32.96:0,33,330	0/0:14,0:13:27.89:0,28,414	1/1:0,19:19:48.09:689,48,0	1/1:1,11:12:24.08:358,24,0	0/0:31,0:31:87.19:0,87,1015	1/1:8,17:24:5.16:550,5,0	1/1:4,11:15:29.74:391,30,0	1/1:1,14:15:38.96:496,39,0	1/1:0,6:6:12.04:178,12,0	0/0:19,0:18:39.02:0,39,409	0/0:16,0:16:36.02:0,36,389	0/0:22,0:22:53.98:0,54,662	0/0:18,0:18:41.97:0,42,414	0/0:26,0:26:69.16:0,69,805	0/0:25,0:25:63.15:0,63,736	0/0:5,0:4:12.02:0,12,139
chr10	14948514	.	G	GA	6677.77	PASS	AB=0.786;AC=34;AF=0.607;AN=56;BaseQRankSum=-11.224;DP=518;FS=7.065;HRun=9;HaplotypeScore=65.3365;InbreedingCoeff=0.8687;MQ=62.63;MQ0=10;MQRankSum=1.078;QD=20.30;ReadPosRankSum=4.184;VQSLOD=5.3141;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,39:47:87.24:962,87,0	1/1:2,9:10:21.06:232,21,0	0/1:15,0:8:0.62:1,0,84	0/0:19,0:7:17.93:0,18,142	0/0:20,0:20:47.95:0,48,410	0/0:26,0:26:59.73:0,60,511	0/0:22,0:22:44.96:0,45,390	1/1:8,16:24:48.13:531,48,0	1/1:3,8:10:17.88:199,18,0	1/1:6,21:27:63.15:686,63,0	1/1:2,10:10:24.06:264,24,0	0/1:2,5:8:7.56:99,0,8	1/1:3,7:10:8.87:99,9,0	1/1:6,9:14:18.05:199,18,0	0/0:19,0:19:50.18:0,50,410	0/0:14,0:14:35.95:0,36,302	1/1:3,26:29:69.19:763,69,0	0/0:24,0:23:59.73:0,60,487	0/0:21,0:21:53.73:0,54,452	0/0:12,0:12:30.13:0,30,209	0/0:12,0:12:26.98:0,27,229	1/1:3,12:14:24.06:266,24,0	1/1:2,13:15:27.07:299,27,0	1/1:2,14:16:39.11:431,39,0	1/1:1,14:15:30.08:332,30,0	1/1:6,22:28:60.16:662,60,0	1/1:2,24:26:54.15:597,54,0	1/1:5,0:4:6:56,6,0
chr10	14948961	.	T	TA	1252.28	PASS	AB=0.749;AC=35;AF=0.625;AN=56;BaseQRankSum=-2.490;DP=281;FS=9.679;HRun=15;HaplotypeScore=45.4719;InbreedingCoeff=0.3334;MQ=50.55;MQ0=10;MQRankSum=-0.618;QD=5.15;ReadPosRankSum=-1.705;VQSLOD=0.6919;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:12,13:24:0.06:101,0,0	1/1:0,1:1:3:25,3,0	0/0:5,0:2:2.90:0,3,16	0/0:4,0:3:2.90:0,3,16	0/0:3,0:10:14.24:0,14,41	0/0:3,0:14:14.21:0,14,41	0/0:1,0:2:4.07:0,4,12	0/1:13,11:22:15.09:87,0,15	1/1:3,3:5:5.48:31,5,0	0/1:5,3:8:8.98:41,0,9	1/1:4,6:10:11.88:84,12,0	0/1:4,0:4:0:0,0,0	1/1:3,6:9:8.99:76,9,0	1/1:6,2:7:5.99:51,6,0	1/1:0,5:5:8.99:76,9,0	1/1:3,2:7:5.80:34,6,0	1/1:7,15:20:17.95:146,18,0	1/1:13,5:18:17.99:166,18,0	1/1:15,4:17:11.95:95,12,0	0/1:4,4:9:0.30:82,0,0	1/1:3,1:4:5.96:45,6,0	0/1:2,0:2:0:0,0,0	0/1:2,2:4:0:0,0,0	0/0:2,0:2:2.94:0,3,18	0/1:7,6:13:5.08:64,0,5	1/1:14,5:17:10.69:76,11,0	0/1:10,9:19:3.34:73,0,3	1/1:3,2:5:5.99:50,6,0
chr10	14951507	.	TCACA	T	2697.18	PASS	AB=0.700;AC=35;AF=0.648;AN=54;BaseQRankSum=-2.303;DP=496;FS=0.000;HRun=0;HaplotypeScore=98.9042;InbreedingCoeff=0.6461;MQ=53.16;MQ0=26;MQRankSum=-0.371;QD=9.53;ReadPosRankSum=2.493;VQSLOD=2.5307;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:27:6.02:0,6,119	1/1:1,0:2:3:28,3,0	./.	0/0:41,0:6:0:0,0,0	1/1:6,14:20:35.28:420,35,0	1/1:8,5:13:9.03:140,9,0	1/1:15,8:24:5.45:203,5,0	1/1:11,0:10:2.04:6,2,0	1/1:5,0:7:6:53,6,0	1/1:6,0:14:21.02:195,21,0	1/1:9,0:18:9.01:84,9,0	0/0:7,0:11:11.62:0,12,158	0/0:10,0:10:9.01:0,9,130	0/0:14,0:18:12.73:0,13,158	1/1:5,13:19:21.07:318,21,0	1/1:5,9:15:18.01:252,18,0	1/1:14,0:18:14.51:117,15,0	0/1:12,9:21:17.27:479,0,17	1/1:13,1:13:6.90:76,7,0	1/1:13,5:18:9.03:133,9,0	1/1:20,7:27:6.02:94,6,0	0/0:5,0:10:9.03:0,9,164	0/0:9,0:9:3.01:0,3,40	0/0:10,0:26:14.08:0,14,196	0/0:10,0:17:14.08:0,14,215	1/1:9,0:12:9.01:84,9,0	1/1:12,0:15:9.01:84,9,0	1/1:5,0:12:12.01:112,12,0
chr10	14964787	.	G	GT	3103.82	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-13.185;DP=487;FS=17.168;HRun=7;HaplotypeScore=52.7802;InbreedingCoeff=0.9936;MQ=84.43;MQ0=0;MQRankSum=0.843;QD=27.23;ReadPosRankSum=2.292;VQSLOD=2.3869;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:81.01:0,81,756	0/0:5,0:5:15.02:0,15,144	0/0:19,0:18:35.89:0,36,406	0/0:24,0:23:46.75:0,47,398	0/0:16,0:16:45.07:0,45,435	0/0:19,0:19:51.05:0,51,482	0/0:21,0:21:60.08:0,60,573	0/0:22,0:22:54.05:0,54,508	0/0:17,0:17:42.06:0,42,405	0/0:24,0:24:69.09:0,69,660	0/0:6,0:6:18.03:0,18,174	0/0:14,0:14:36.06:0,36,347	0/0:13,0:13:33.05:0,33,318	0/0:16,0:16:45.07:0,45,434	1/1:2,20:22:45.11:529,45,0	1/1:3,11:14:24.07:290,24,0	0/0:24,0:24:57.05:0,57,542	1/1:0,16:16:48.15:579,48,0	1/1:2,18:20:54.13:625,54,0	1/1:0,9:9:27.08:326,27,0	1/1:4,29:33:78.24:942,78,0	0/0:17,0:17:48.05:0,48,452	0/0:11,0:11:27.04:0,27,261	0/0:24,0:24:57.08:0,57,549	0/0:11,0:11:33.04:0,33,314	0/0:10,0:10:30.05:0,30,289	0/0:17,0:17:42.06:0,42,404	0/0:11,0:11:24.03:0,24,232
chr10	14964868	.	C	CGGGGACACTCT	8162.38	PASS	AC=30;AF=0.556;AN=54;BaseQRankSum=-4.767;DP=519;FS=0.000;HRun=0;HaplotypeScore=165.3877;InbreedingCoeff=0.7683;MQ=72.11;MQ0=0;MQRankSum=-9.329;QD=28.44;ReadPosRankSum=-3.245;VQSLOD=3.6443;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:25,10:40:27.09:1288,27,0	1/1:5,2:8:4.26:165,4,0	0/0:10,0:10:18.03:0,18,283	0/0:26,0:26:10.06:0,10,212	0/0:7,0:7:8.92:0,9,288	0/0:17,0:17:21.07:0,21,670	0/0:30,0:30:42.10:0,42,939	1/1:21,0:21:24.08:543,24,0	1/1:8,8:19:21.07:1127,21,0	1/1:9,2:14:12.02:377,12,0	./.	1/1:17,6:28:10.06:958,10,0	1/1:14,2:21:11.84:643,12,0	1/1:11,7:25:14.85:805,15,0	0/0:24,0:24:48.16:0,48,1412	0/0:16,0:16:33.11:0,33,1001	1/1:21,6:32:9.03:478,9,0	0/0:25,0:25:54.12:0,54,1581	0/0:15,0:15:12.04:0,12,384	0/0:8,0:8:1.25:0,1,66	0/0:47,0:47:78.20:0,78,1990	1/1:12,0:11:2.90:16,3,0	0/0:3,0:3:0:0,0,0	1/1:22,2:26:3.01:103,3,0	1/1:4,0:4:2.97:20,3,0	1/1:11,1:14:12.03:477,12,0	1/1:10,4:18:21:1001,21,0	1/1:4,1:5:3.01:162,3,0
chr10	14965251	.	TTTG	T	5025.48	PASS	AB=0.910;AC=37;AF=0.661;AN=56;BaseQRankSum=-5.701;DP=489;FS=9.229;HRun=0;HaplotypeScore=87.9452;InbreedingCoeff=0.5611;MQ=50.85;MQ0=30;MQRankSum=3.704;QD=13.29;ReadPosRankSum=-1.267;VQSLOD=3.0926;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:38,0:38:78.98:623,79,0	1/1:1,5:5:8.94:85,9,0	0/1:60,0:12:4.63:5,0,125	0/0:55,0:14:6.84:0,7,93	0/1:22,0:22:16.73:160,0,17	0/1:14,0:14:2.26:210,0,2	0/1:12,0:12:8.14:114,0,8	1/1:4,15:17:44.84:419,45,0	0/1:2,9:10:0.20:84,0,0	1/1:4,16:19:35.60:310,36,0	1/1:12,4:16:46.51:450,47,0	1/1:10,0:10:27.35:211,27,0	1/1:6,0:5:8.52:103,9,0	1/1:8,0:6:8.07:91,8,0	0/0:8,0:8:8.38:0,8,45	0/0:12,0:11:13.21:0,13,78	1/1:2,23:25:14.78:159,15,0	0/0:10,0:10:18.85:0,19,94	0/0:6,0:5:14.27:0,14,87	0/0:9,0:9:2.59:0,3,17	0/0:11,0:10:10.54:0,11,52	1/1:10,0:10:29.86:246,30,0	1/1:13,0:12:28.44:251,28,0	1/1:17,0:14:9.70:132,10,0	1/1:17,0:16:23.41:315,23,0	1/1:4,25:28:71.74:660,72,0	1/1:15,4:17:38.87:349,39,0	1/1:0,6:6:3.01:48,3,0
chr10	14965253	.	T	TGAG	2053.10	PASS	AB=0.926;AC=13;AF=0.232;AN=56;BaseQRankSum=4.028;DP=478;FS=21.569;HRun=0;HaplotypeScore=111.8506;InbreedingCoeff=0.7758;MQ=48.95;MQ0=31;MQRankSum=-7.906;QD=28.12;ReadPosRankSum=-0.404;VQSLOD=1.7649;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:81.59:0,82,903	0/0:6,0:5:9.02:0,9,106	0/0:59,0:11:5.58:0,6,175	0/0:54,0:13:12.38:0,12,183	0/0:21,0:22:52.23:0,52,642	0/0:15,0:15:36.08:0,36,439	0/0:10,0:12:31.06:0,31,354	0/0:18,0:16:5.07:0,5,294	0/0:10,0:9:8.67:0,9,60	0/0:18,0:17:15.55:0,16,253	0/0:16,0:16:12.74:0,13,397	0/0:10,0:10:29.90:0,30,333	0/0:7,0:6:15.04:0,15,178	0/0:8,0:6:15:0,15,159	1/1:4,3:7:21.07:400,21,0	1/1:10,1:10:30.09:532,30,0	0/1:23,0:25:21.12:38,0,21	1/1:5,4:9:21.07:431,21,0	1/1:4,2:5:12.04:227,12,0	1/1:6,1:7:18.06:311,18,0	1/1:5,3:7:15.05:298,15,0	0/0:12,0:11:30.07:0,30,350	0/0:13,0:12:33.06:0,33,379	0/0:18,0:15:20.95:0,21,226	0/0:17,0:16:36.95:0,37,403	0/0:28,0:27:26.14:0,26,618	0/0:18,0:16:14.88:0,15,296	0/0:6,0:6:2.98:0,3,22
chr10	14965257	.	T	TGC	239.80	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=6.098;DP=487;FS=10.435;HRun=0;HaplotypeScore=103.7440;InbreedingCoeff=0.7264;MQ=46.13;MQ0=59;MQRankSum=-4.944;QD=2.92;ReadPosRankSum=5.455;VQSLOD=1.0480;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:37:88.50:0,89,1032	0/0:7,0:6:12.04:0,12,144	0/1:56,0:9:5.53:6,0,85	0/0:55,0:13:17.17:0,17,153	0/0:22,0:22:54.56:0,55,688	0/0:16,0:14:36.12:0,36,533	0/0:13,0:12:33.09:0,33,434	0/0:23,0:21:47.96:0,48,524	0/0:12,0:9:9:0,9,96	0/0:21,0:20:35.94:0,36,426	0/0:20,0:17:48.04:0,48,614	0/0:9,0:9:18.19:0,18,277	0/0:9,0:7:17.98:0,18,189	0/0:10,0:6:13.84:0,14,158	1/1:0,3:3:8.96:72,9,0	1/1:3,1:3:3.77:35,4,0	0/0:29,0:26:15:0,15,152	1/1:3,4:5:15:133,15,0	1/1:3,2:2:6.02:70,6,0	1/1:0,1:1:2.99:23,3,0	1/1:3,3:5:5.38:59,5,0	0/0:14,0:13:33.78:0,34,394	0/0:12,0:11:31.34:0,31,433	0/0:19,0:15:20.90:0,21,230	0/0:19,0:17:40.18:0,40,503	0/0:31,0:28:69.10:0,69,826	0/0:19,0:16:41.15:0,41,507	0/0:6,0:6:3.01:0,3,38
chr10	14965265	.	T	TG	112.13	PASS	AB=0.968;AC=15;AF=0.268;AN=56;BaseQRankSum=6.434;DP=505;FS=0.000;HRun=0;HaplotypeScore=83.9309;InbreedingCoeff=0.5376;MQ=39.90;MQ0=89;MQRankSum=-2.358;QD=0.99;ReadPosRankSum=4.623;VQSLOD=1.2965;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:42:97.58:0,98,672	0/0:8,0:5:11.56:0,12,69	0/0:54,0:8:7.34:0,7,74	0/0:48,0:8:11.50:0,12,62	0/0:23,0:22:57.60:0,58,407	0/0:15,0:11:29.89:0,30,241	0/0:12,0:10:26.77:0,27,199	0/0:21,1:20:33.63:0,34,211	0/0:12,0:8:8.92:0,9,65	0/1:22,0:21:8.61:9,0,81	0/0:22,0:18:10.50:0,11,145	0/0:9,0:9:23.43:0,23,178	0/0:10,0:8:14.90:0,15,114	0/0:11,0:7:20.23:0,20,140	1/1:3,0:3:7.62:37,8,0	1/1:3,0:2:5.78:30,6,0	0/1:29,1:27:22.96:23,0,31	1/1:9,0:5:13.79:77,14,0	1/1:6,0:2:4.12:19,4,0	1/1:3,0:1:1.82:5,2,0	1/1:8,0:3:7.36:35,7,0	0/0:14,0:13:33.26:0,33,250	0/0:12,0:9:26.79:0,27,201	0/0:27,0:17:18.75:0,19,132	0/0:19,0:16:47.62:0,48,357	0/1:27,2:26:39.48:39,0,152	0/0:21,0:17:22.86:0,23,161	0/0:6,0:6:2.92:0,3,17
chr10	14965673	.	C	CTT	7931.73	PASS	AB=0.728;AC=50;AF=0.893;AN=56;BaseQRankSum=-1.587;DP=547;FS=6.688;HRun=12;HaplotypeScore=97.7750;InbreedingCoeff=0.2634;MQ=59.55;MQ0=9;MQRankSum=-0.628;QD=14.85;ReadPosRankSum=0.673;VQSLOD=3.6845;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:12,17:34:27.09:580,27,0	1/1:2,2:7:15.03:170,15,0	0/0:13,0:8:10.77:0,11,94	0/1:13,0:9:9.64:10,0,58	1/1:12,4:20:28.92:271,29,0	1/1:4,10:20:47.80:514,48,0	1/1:13,12:27:47.63:599,48,0	1/1:14,3:22:10.35:337,10,0	1/1:14,2:19:38.65:401,39,0	1/1:14,3:27:48.07:506,48,0	0/1:8,1:14:1.81:209,0,2	1/1:12,7:19:38.40:416,38,0	1/1:5,10:16:29.58:378,30,0	1/1:6,5:12:21.02:272,21,0	1/1:10,0:22:10.71:126,11,0	1/1:7,0:20:2.69:67,3,0	1/1:10,1:27:39.03:378,39,0	1/1:5,0:20:8.56:86,9,0	1/1:9,0:20:17.61:116,18,0	0/1:9,0:20:17.46:68,0,17	0/1:5,0:19:2.30:52,0,2	1/1:10,8:23:40.72:376,41,0	1/1:9,7:16:18.06:252,18,0	1/1:5,12:15:36.12:505,36,0	1/1:10,3:14:23.46:253,23,0	1/1:13,0:28:56.10:546,56,0	1/1:9,4:18:24.05:270,24,0	1/1:0,0:6:18.03:172,18,0
chr10	14966077	.	AGATTGATT	A	6212.20	PASS	AC=16;AF=0.296;AN=54;BaseQRankSum=2.770;DP=552;FS=1.525;HRun=0;HaplotypeScore=165.6956;InbreedingCoeff=0.9558;MQ=55.52;MQ0=7;MQRankSum=-11.153;QD=40.60;ReadPosRankSum=-1.681;VQSLOD=4.6069;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:75.26:0,75,2990	0/0:3,0:9:17.98:0,18,147	0/0:12,0:6:6.02:0,6,236	0/0:17,0:11:15.05:0,15,601	1/1:10,13:23:33.11:837,33,0	1/1:8,22:30:66.23:1640,66,0	1/1:9,6:15:12.04:304,12,0	0/0:30,0:35:42.03:0,42,627	0/0:17,0:19:20.99:0,21,199	0/0:11,0:23:41.97:0,42,410	0/0:7,0:18:38.97:0,39,347	0/0:16,0:16:39.13:0,39,1536	0/0:22,0:22:42.14:0,42,1726	0/0:26,0:26:48.16:0,48,1965	1/1:9,11:20:33.11:838,33,0	1/1:2,12:14:36.12:915,36,0	0/0:13,0:20:39:0,39,402	1/1:12,5:16:18.06:438,18,0	1/1:10,4:13:12.04:305,12,0	1/1:8,12:19:39.10:935,39,0	./.	0/0:21,0:21:51.18:0,51,2112	0/0:21,0:21:42.13:0,42,1521	0/0:19,0:19:36.12:0,36,1412	0/0:22,0:22:45.15:0,45,1701	0/0:11,0:32:74.94:0,75,665	0/0:3,0:14:32.93:0,33,267	0/0:5,0:7:8.97:0,9,71
chr10	14966158	.	G	GC	22766.98	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-6.781;DP=614;FS=1.351;HRun=0;HaplotypeScore=87.8795;InbreedingCoeff=0.9911;MQ=60.52;MQ0=2;MQRankSum=-0.899;QD=40.30;ReadPosRankSum=6.073;VQSLOD=4.9878;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,42:42:99:1675,105,0	1/1:0,5:5:15.05:239,15,0	0/0:25,0:24:67.99:0,68,900	0/0:24,0:18:45.30:0,45,597	1/1:1,35:34:72.14:1145,72,0	1/1:1,28:29:81.27:1267,81,0	1/1:2,18:20:45.15:716,45,0	1/1:5,27:29:81.24:1255,81,0	1/1:0,11:11:30.10:479,30,0	1/1:0,17:16:48.16:754,48,0	1/1:2,17:19:45.15:711,45,0	1/1:0,30:30:78.27:1235,78,0	1/1:1,13:14:33.11:527,33,0	1/1:0,24:24:60.07:889,60,0	1/1:0,27:27:66.15:998,66,0	1/1:0,14:14:42.14:669,42,0	1/1:0,24:24:69.24:1100,69,0	1/1:0,25:24:66.23:1053,66,0	1/1:1,14:15:42.14:667,42,0	1/1:1,15:15:33.05:523,33,0	1/1:0,18:18:39.13:623,39,0	1/1:0,25:25:66.23:1053,66,0	1/1:0,20:20:57.19:894,57,0	1/1:0,25:25:63.21:1005,63,0	1/1:0,18:18:48.16:762,48,0	1/1:1,21:22:59.98:952,60,0	1/1:0,25:25:66.22:1050,66,0	1/1:0,12:12:33.11:527,33,0
chr10	14968360	.	G	GA	352.36	PASS	AB=1.000;AC=34;AF=0.739;AN=46;BaseQRankSum=-1.479;DP=104;FS=26.190;HRun=0;HaplotypeScore=45.2020;InbreedingCoeff=0.3236;MQ=60.82;MQ0=6;MQRankSum=-0.714;QD=4.40;ReadPosRankSum=1.146;VQSLOD=1.5913;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,3:8:8.67:61,9,0	./.	0/1:13,0:2:0.81:1,0,18	0/0:14,0:5:5.62:0,6,29	./.	0/1:2,0:2:0:0,0,0	1/1:4,2:4:1.09:26,1,0	0/0:2,0:1:2.99:0,3,24	1/1:3,0:2:2.90:16,3,0	1/1:4,0:4:2.33:37,2,0	1/1:2,0:2:5.77:31,6,0	1/1:3,0:3:2.60:13,3,0	./.	0/1:3,0:3:0.01:0,0,0	1/1:3,0:3:0.76:16,1,0	1/1:4,0:4:2.19:7,2,0	1/1:1,0:1:2.37:8,2,0	./.	0/0:2,0:2:4.69:0,5,20	0/0:2,0:1:1.82:0,2,5	1/1:5,6:7:11.61:100,12,0	1/1:2,0:2:2.96:19,3,0	1/1:3,0:3:4.38:29,4,0	1/1:4,2:6:8.90:66,9,0	0/1:2,0:2:0:0,0,0	1/1:2,1:2:3.35:16,3,0	./.	1/1:1,0:1:2.97:20,3,0
chr10	14968374	.	G	GGTA	2170.84	PASS	AB=0.793;AC=27;AF=0.519;AN=52;BaseQRankSum=0.768;DP=243;FS=44.097;HRun=0;HaplotypeScore=73.4345;InbreedingCoeff=-0.5616;MQ=57.18;MQ0=20;MQRankSum=-4.136;QD=12.62;ReadPosRankSum=0.731;VQSLOD=1.0527;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:10,7:17:99:369,0,285	./.	0/0:29,0:4:15.02:0,15,178	0/0:29,0:8:3.41:0,3,54	0/0:10,0:9:0.01:0,0,0	0/1:3,1:4:56.80:57,0,97	0/1:11,2:12:99:206,0,172	0/1:10,0:8:70.56:118,0,71	0/1:5,1:5:51.26:51,0,64	0/1:10,1:11:99:139,0,142	1/1:4,0:4:4.52:89,5,0	0/1:7,1:7:99:107,0,119	1/1:2,0:2:3.01:53,3,0	0/1:2,1:3:43.74:99,0,44	0/1:3,2:6:33.06:185,0,33	0/1:9,0:10:77.74:108,0,78	./.	0/1:1,1:2:17.94:63,0,18	0/1:3,2:4:93.72:127,0,94	0/1:5,3:7:13.88:14,0,47	0/1:9,7:11:55.58:56,0,151	0/1:7,0:6:40.16:40,0,58	0/1:4,1:5:9:78,0,9	0/1:5,1:7:43.87:45,0,44	1/1:3,1:4:9.33:88,9,0	0/1:7,1:7:71.38:71,0,85	1/1:5,0:3:3.01:56,3,0	0/1:2,0:3:3.37:96,0,3
chr10	14968395	.	AAGAGGAGGAGG	A	1820.68	PASS	AB=0.946;AC=20;AF=0.357;AN=56;BaseQRankSum=-1.368;DP=344;FS=2.295;HRun=0;HaplotypeScore=117.8501;InbreedingCoeff=-0.4581;MQ=51.09;MQ0=34;MQRankSum=-5.610;QD=7.59;ReadPosRankSum=-0.870;VQSLOD=2.4204;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:23:32.61:0,33,1684	0/0:1,0:1:3.01:0,3,137	0/1:36,0:6:2.15:2,0,44	0/1:46,0:11:14.20:14,0,27	0/1:8,4:11:34.81:338,0,35	0/1:2,3:5:52.21:302,0,52	0/1:11,5:15:99:589,0,134	0/1:18,0:15:12.92:13,0,418	0/1:11,0:10:55.62:56,0,294	0/1:11,0:10:45.17:45,0,381	0/1:8,0:6:7.37:7,0,178	0/0:11,0:10:22.42:0,22,617	0/1:4,0:4:45.30:45,0,113	0/1:7,0:5:24.90:25,0,81	0/1:10,0:9:44.18:44,0,368	0/1:11,0:11:81.76:82,0,550	1/1:0,4:4:3.01:81,3,0	0/0:3,0:3:9.03:0,9,282	0/1:9,0:7:2.91:3,0,248	0/1:13,0:10:99:126,0,442	0/0:24,0:18:27.07:0,27,923	0/1:8,0:5:29.36:29,0,191	0/0:8,0:8:0.57:0,1,109	0/0:11,0:10:4.09:0,4,509	0/0:5,0:5:5.34:0,5,107	0/0:13,0:11:19.52:0,20,787	0/1:6,0:4:82.24:82,0,186	0/1:2,0:2:39.92:87,0,40
chr10	14968396	.	AGAGG	A	146.58	PASS	AB=0.965;AC=17;AF=0.304;AN=56;BaseQRankSum=6.862;DP=348;FS=9.051;HRun=0;HaplotypeScore=100.0998;InbreedingCoeff=0.2565;MQ=51.16;MQ0=34;MQRankSum=-6.567;QD=1.12;ReadPosRankSum=4.477;VQSLOD=0.8868;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:23:39.19:0,39,802	0/0:1,0:1:3.01:0,3,67	0/0:37,0:6:14.28:0,14,121	0/1:47,0:11:1.20:1,0,83	0/1:10,2:11:0.79:14,0,1	1/1:5,0:5:9.85:75,10,0	0/1:17,0:16:27.32:27,0,133	0/0:16,0:14:27.20:0,27,359	0/0:12,0:10:19.32:0,19,253	0/1:10,1:10:26.39:26,0,216	0/1:8,0:6:17.41:17,0,78	0/0:9,0:9:20.30:0,20,350	1/1:4,0:4:0.15:4,0,0	0/0:7,0:5:10.59:0,11,149	0/0:10,0:9:17.01:0,17,260	0/0:11,0:11:11:0,11,338	1/1:4,0:4:0.47:1,0,0	0/0:4,0:4:8.25:0,8,148	0/0:8,1:7:10.31:0,10,207	0/0:12,0:9:6.04:0,6,226	0/0:27,0:21:35.93:0,36,649	0/0:8,0:5:1.05:0,1,58	0/1:7,0:8:46.52:47,0,52	0/0:11,0:10:20.96:0,21,340	1/1:4,1:5:9.36:64,9,0	0/0:13,0:11:23.82:0,24,445	0/1:6,0:4:2.12:2,0,119	1/1:2,0:2:2.58:13,3,0
chr10	14968399	.	GGA	G	354.97	PASS	AB=0.835;AC=22;AF=0.393;AN=56;BaseQRankSum=5.601;DP=353;FS=18.708;HRun=0;HaplotypeScore=93.0522;InbreedingCoeff=-0.2078;MQ=51.15;MQ0=32;MQRankSum=-7.333;QD=1.86;ReadPosRankSum=2.826;VQSLOD=0.5296;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:21,7:23:51.48:51,0,733	0/0:1,0:1:3.01:0,3,58	0/0:36,0:5:12.66:0,13,65	0/0:44,1:12:8.20:0,8,71	0/1:10,2:11:14.63:15,0,19	1/1:4,1:5:10.87:56,11,0	0/1:11,6:16:92.76:93,0,93	0/1:14,2:13:14.84:15,0,243	0/1:11,2:11:0.51:1,0,166	0/1:8,2:9:27.13:27,0,157	0/1:8,1:7:27.98:28,0,94	0/0:10,1:9:11.72:0,12,288	1/1:0,4:4:8.78:58,9,0	0/1:5,1:4:2.50:2,0,84	0/1:9,2:10:7.70:8,0,218	0/1:9,1:10:2.39:2,0,273	0/0:4,0:4:2.37:0,2,8	0/1:3,1:4:10.68:11,0,144	0/1:8,1:7:8:8,0,177	0/1:9,3:9:15.67:16,0,211	0/0:27,1:22:28.17:0,28,654	0/1:6,2:6:29.37:29,0,49	0/1:6,2:8:19.52:20,0,47	0/0:12,0:11:17.90:0,18,324	0/1:4,2:6:33.60:34,0,51	0/0:13,1:12:9.48:0,9,456	0/0:5,1:4:5.73:0,6,115	1/1:1,1:2:5.91:40,6,0
chr10	14969507	.	ACG	A	832.94	PASS	AB=1.000;AC=16;AF=0.286;AN=56;BaseQRankSum=0.043;DP=530;FS=34.044;HRun=0;HaplotypeScore=150.6421;InbreedingCoeff=0.2426;MQ=61.76;MQ0=5;MQRankSum=-0.303;QD=4.27;ReadPosRankSum=2.105;VQSLOD=1.0851;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:38.58:0,39,250	0/0:16,0:16:14.77:0,15,77	1/1:13,0:11:4.88:20,5,0	0/1:14,0:11:23.47:29,0,23	1/1:5,13:18:21.04:246,21,0	1/1:1,11:13:11.87:131,12,0	1/1:7,16:23:5.98:59,6,0	0/0:24,0:22:54.91:0,55,436	0/0:22,0:22:28.57:0,29,195	0/0:25,0:25:29.53:0,30,219	0/0:12,0:12:13.40:0,13,100	0/0:16,0:16:15:0,15,82	0/0:20,0:20:21.26:0,21,130	0/0:19,0:19:12.24:0,12,145	0/1:18,0:18:16.71:47,0,17	0/1:11,0:11:7.78:16,0,8	0/0:40,0:39:54.65:0,55,346	0/1:14,0:14:30.10:35,0,30	0/1:17,0:17:67.52:151,0,68	0/1:16,0:16:6:36,0,6	0/1:25,0:25:16.23:221,0,16	0/1:13,0:13:13.52:14,0,29	0/0:23,0:23:24.40:0,24,109	0/0:33,0:33:5.92:0,6,163	0/0:11,0:11:5.77:0,6,34	0/0:20,0:20:25.81:0,26,170	0/0:22,0:22:7.86:0,8,65	0/0:11,0:10:12.77:0,13,74
chr10	14969515	.	G	GCACA	1358.76	PASS	AB=0.876;AC=9;AF=0.161;AN=56;BaseQRankSum=-3.008;DP=509;FS=7.139;HRun=0;HaplotypeScore=166.4950;InbreedingCoeff=0.5197;MQ=55.49;MQ0=6;MQRankSum=4.486;QD=12.02;ReadPosRankSum=0.761;VQSLOD=2.8685;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:48.10:0,48,681	0/0:11,0:11:24.07:0,24,349	0/0:7,0:5:5.11:0,5,20	0/0:10,0:7:4.13:0,4,43	0/0:15,0:17:23.97:0,24,211	0/0:15,0:15:21.05:0,21,250	0/0:23,0:23:8.40:0,8,117	0/0:22,0:20:56.97:0,57,688	0/0:20,0:20:41.87:0,42,528	0/0:23,0:23:51.37:0,51,646	0/0:11,0:11:20.91:0,21,238	0/0:14,0:14:33.04:0,33,458	0/0:17,0:17:39.13:0,39,597	0/0:20,0:20:42.08:0,42,591	1/1:4,12:17:18.94:503,19,0	1/1:3,5:10:14.61:259,15,0	0/0:42,0:41:63.13:0,63,811	0/1:9,11:22:36.16:219,0,36	0/1:16,0:16:29.27:151,0,29	1/1:4,12:17:13.79:324,14,0	0/1:31,0:30:49.92:57,0,50	0/0:11,0:11:10.51:0,11,285	0/0:22,0:22:48.03:0,48,690	0/0:29,0:30:47.17:0,47,680	0/0:9,0:9:24.08:0,24,388	0/0:21,0:21:43.11:0,43,457	0/0:21,0:21:45.14:0,45,681	0/0:9,0:8:17.85:0,18,237
chr10	14969517	.	GCACACACACACACA	G	7389.94	PASS	AB=0.759;AC=15;AF=0.288;AN=52;BaseQRankSum=0.071;DP=501;FS=6.294;HRun=0;HaplotypeScore=211.2150;InbreedingCoeff=0.8720;MQ=51.47;MQ0=6;MQRankSum=-8.205;QD=52.04;ReadPosRankSum=1.065;VQSLOD=3.7437;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:15,7:22:25.72:574,0,26	0/0:3,0:11:18.06:0,18,338	./.	./.	0/0:17,0:17:24.08:0,24,1103	0/0:15,0:15:21.07:0,21,1109	0/0:21,0:21:11.88:0,12,621	0/0:22,0:20:10.22:0,10,133	0/0:11,0:18:27.09:0,27,519	0/0:12,0:22:54.03:0,54,998	0/0:6,0:11:12.04:0,12,317	1/1:4,10:14:21.07:829,21,0	1/1:7,9:17:24.08:902,24,0	1/1:7,12:19:24.08:929,24,0	0/0:18,0:18:27.09:0,27,1531	0/0:9,0:9:17.34:0,17,923	0/0:25,0:40:33.46:0,33,680	0/0:27,0:27:38.37:0,38,1746	0/0:16,0:16:27.09:0,27,1634	0/0:18,0:18:19.86:0,20,944	0/0:24,0:31:27.43:0,27,1233	1/1:5,5:11:15.05:592,15,0	1/1:8,13:22:42.14:1603,42,0	1/1:19,10:29:30.57:1133,31,0	1/1:1,7:8:21.07:829,21,0	0/0:8,0:20:37.74:0,38,651	0/0:6,0:20:42.14:0,42,859	0/0:4,0:8:12.02:0,12,210
chr10	14970027	.	AG	A	1690.57	PASS	AB=0.971;AC=33;AF=0.589;AN=56;BaseQRankSum=-5.656;DP=474;FS=1.181;HRun=11;HaplotypeScore=102.5193;InbreedingCoeff=0.7076;MQ=81.02;MQ0=2;MQRankSum=-0.356;QD=5.62;ReadPosRankSum=7.680;VQSLOD=1.1061;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:33,0:33:44.80:130,45,0	0/0:3,0:3:2.96:0,3,19	0/0:34,0:31:24.61:0,25,298	0/1:32,1:22:25.28:25,0,81	1/1:10,0:10:2.42:6,2,0	0/0:14,0:14:8.18:0,8,51	0/0:19,0:22:21.80:0,22,127	0/0:6,0:7:2.84:0,3,14	0/0:12,0:12:20.79:0,21,165	1/1:12,0:13:2.34:10,2,0	0/0:7,0:7:3.43:0,3,20	1/1:13,0:13:20.37:59,20,0	1/1:13,0:13:22.39:65,22,0	1/1:17,0:17:26.48:76,26,0	1/1:1,12:14:25.29:202,25,0	1/1:4,10:14:20.97:172,21,0	0/0:11,0:24:12.71:0,13,112	1/1:1,17:18:32.94:271,33,0	1/1:5,14:20:43.85:333,44,0	1/1:7,7:15:7.95:97,8,0	1/1:4,12:18:31.03:233,31,0	1/1:12,0:12:6.36:18,6,0	1/1:21,0:21:22.17:65,22,0	1/1:22,0:22:26.48:77,26,0	1/1:15,0:15:16.58:48,17,0	0/0:17,0:23:16.32:0,16,104	0/0:7,0:19:2.43:0,2,74	0/0:2,0:8:2.84:0,3,14
chr10	14970036	.	GGGC	G	4749.49	PASS	AB=1.000;AC=25;AF=0.446;AN=56;BaseQRankSum=-9.268;DP=415;FS=1.452;HRun=0;HaplotypeScore=84.4760;InbreedingCoeff=0.3581;MQ=78.37;MQ0=2;MQRankSum=-2.207;QD=20.12;ReadPosRankSum=3.489;VQSLOD=4.1998;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,32:32:66.22:1068,66,0	0/1:3,0:3:11.85:12,0,45	0/0:27,0:24:63.10:0,63,715	0/0:24,0:15:26.33:0,26,284	0/0:5,0:5:2.67:0,3,25	0/1:7,0:7:15.15:15,0,58	0/1:21,0:21:76.39:76,0,167	0/1:14,0:14:33.71:51,0,34	0/1:10,0:10:35.38:35,0,148	0/0:5,0:5:4.70:0,5,35	0/1:6,0:6:12:46,0,12	1/1:0,12:12:30.10:481,30,0	1/1:0,12:12:33.05:534,33,0	1/1:0,17:17:39.13:629,39,0	0/0:14,0:14:30.78:0,31,284	0/0:14,0:14:33.02:0,33,328	0/0:18,0:18:28.76:0,29,180	0/0:18,0:18:42.09:0,42,453	0/0:18,0:18:50.94:0,51,487	0/0:13,0:14:30.94:0,31,359	0/0:21,0:21:50.06:0,50,502	1/1:2,8:10:15.72:176,16,0	1/1:1,17:18:33.11:530,33,0	1/1:0,20:20:39.13:633,39,0	1/1:0,14:14:30.05:434,30,0	0/1:14,0:14:0.24:0,0,143	0/1:18,0:18:21.05:21,0,120	0/1:8,0:8:8.92:9,0,38
chr10	14970038	.	GC	G	2456.12	PASS	AB=0.951;AC=40;AF=0.714;AN=56;BaseQRankSum=-1.000;DP=400;FS=9.027;HRun=3;HaplotypeScore=77.8549;InbreedingCoeff=0.6585;MQ=76.49;MQ0=1;MQRankSum=-1.794;QD=8.90;ReadPosRankSum=2.639;VQSLOD=0.4532;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:32,0:32:64.19:366,64,0	1/1:3,0:3:2.55:34,3,0	0/0:24,0:22:51.31:0,51,463	0/1:20,1:13:16.84:17,0,70	1/1:2,0:2:5.95:43,6,0	1/1:7,0:7:8.09:74,8,0	0/1:17,0:18:1.17:99,0,1	1/1:14,0:14:19.89:169,20,0	1/1:10,0:10:5.02:73,5,0	1/1:3,1:4:8.97:83,9,0	1/1:6,0:6:10.32:63,10,0	1/1:12,0:12:28.98:162,29,0	1/1:12,0:12:32.09:183,32,0	1/1:17,0:17:37.90:214,38,0	0/0:15,0:15:11.05:0,11,49	0/0:14,0:14:7.61:0,8,93	1/1:16,1:17:24.69:146,25,0	0/0:18,0:18:8.25:0,8,64	0/0:19,0:19:9.31:0,9,106	0/0:13,0:13:6.33:0,6,72	0/0:20,0:20:7.78:0,8,170	1/1:10,0:10:12.30:60,12,0	1/1:18,0:18:32:178,32,0	1/1:20,0:20:38:218,38,0	1/1:14,0:14:26.29:153,26,0	1/1:13,0:13:5.83:106,6,0	1/1:17,1:18:19.94:159,20,0	1/1:8,0:8:5.83:39,6,0
chr10	14971063	.	C	CT	1758.82	PASS	AB=0.513;AC=30;AF=0.714;AN=42;BaseQRankSum=6.068;DP=394;FS=3.979;HRun=10;HaplotypeScore=31.4561;InbreedingCoeff=0.7056;MQ=23.36;MQ0=159;MQRankSum=0.901;QD=7.55;ReadPosRankSum=0.442;VQSLOD=0.3638;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	1/1:0,5:3:9.02:96,9,0	./.	./.	1/1:3,23:21:14.98:145,15,0	./.	1/1:1,7:4:9.02:96,9,0	1/1:6,17:1:3.01:32,3,0	1/1:2,4:4:9.02:96,9,0	1/1:7,15:16:38.88:378,39,0	1/1:9,12:15:20.88:183,21,0	1/1:3,8:6:3.01:32,3,0	0/1:0,11:5:0:0,0,0	1/1:5,9:8:8.98:82,9,0	0/0:15,0:8:20.82:0,21,157	0/0:12,0:10:26.96:0,27,222	1/1:3,13:4:6.02:64,6,0	0/0:17,1:5:14.98:0,15,123	0/0:19,0:7:20.98:0,21,172	0/0:22,0:17:41.80:0,42,329	./.	1/1:3,3:4:3.01:32,3,0	1/1:1,13:11:3.01:32,3,0	./.	0/1:1,9:5:0:0,0,0	1/1:3,15:12:36.01:358,36,0	1/1:4,16:13:27.07:285,27,0	./.
chr10	14972365	.	CA	C	11738.84	PASS	AB=0.526;AC=39;AF=0.696;AN=56;BaseQRankSum=-7.751;DP=470;FS=9.260;HRun=2;HaplotypeScore=58.2866;InbreedingCoeff=0.9090;MQ=72.40;MQ0=2;MQRankSum=-4.046;QD=35.36;ReadPosRankSum=3.033;VQSLOD=4.9418;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,33:35:87.28:1129,87,0	1/1:0,8:8:21.07:273,21,0	0/0:21,0:19:51.10:0,51,717	0/0:25,0:19:7.98:0,8,576	1/1:0,34:34:99:1302,102,0	1/1:1,17:18:48.16:620,48,0	0/1:1,9:10:6.10:249,0,6	1/1:2,37:38:99:1315,105,0	1/1:0,5:5:15.05:195,15,0	1/1:0,20:20:60.18:761,60,0	1/1:0,10:10:27.09:348,27,0	1/1:0,10:10:30.10:389,30,0	1/1:0,7:7:15.05:195,15,0	1/1:0,15:15:39.13:506,39,0	0/0:10,0:10:27.08:0,27,386	0/0:8,0:8:21.07:0,21,314	1/1:0,30:30:84.27:1091,84,0	0/0:33,0:33:93.25:0,93,1340	0/0:22,0:21:60.16:0,60,861	0/0:13,0:13:39.13:0,39,584	0/0:6,0:6:18.06:0,18,270	1/1:0,6:6:18.06:234,18,0	1/1:0,14:14:42.14:545,42,0	1/1:0,6:6:18.06:234,18,0	1/1:0,18:18:45.15:581,45,0	1/1:0,22:22:66.20:841,66,0	1/1:0,12:12:36.12:466,36,0	1/1:0,13:13:36.12:466,36,0
chr10	14972381	.	GT	G	2589.38	PASS	AB=0.967;AC=13;AF=0.232;AN=56;BaseQRankSum=-7.394;DP=497;FS=11.278;HRun=4;HaplotypeScore=89.1835;InbreedingCoeff=0.9068;MQ=69.26;MQ0=3;MQRankSum=0.087;QD=21.22;ReadPosRankSum=0.071;VQSLOD=2.1633;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,1:36:63.55:0,64,1290	0/0:10,0:10:30.10:0,30,417	0/0:26,0:23:57.13:0,57,734	0/1:28,1:22:9.06:9,0,683	0/0:35,0:35:99:0,105,1469	0/0:18,0:18:51.17:0,51,713	0/0:12,0:12:33.11:0,33,462	0/0:35,0:34:87.27:0,87,1181	0/0:8,0:8:24.08:0,24,332	0/0:21,0:21:60.20:0,60,838	0/0:8,0:8:24.07:0,24,318	0/0:11,0:11:33.11:0,33,462	0/0:9,0:9:21.07:0,21,293	0/0:18,0:18:48.16:0,48,669	1/1:0,9:9:27.08:324,27,0	1/1:0,9:9:21.06:252,21,0	0/0:31,0:31:84.28:0,84,1165	1/1:1,26:27:69.21:828,69,0	1/1:3,18:20:45.10:506,45,0	1/1:1,13:14:39.12:464,39,0	1/1:0,13:13:33.10:396,33,0	0/0:7,0:7:21.07:0,21,294	0/0:16,0:16:48.16:0,48,671	0/0:15,0:15:45.15:0,45,625	0/0:14,0:14:42.14:0,42,588	0/0:19,0:19:54.18:0,54,756	0/0:14,0:13:39.13:0,39,540	0/0:12,0:12:33.11:0,33,459
chr10	14974133	.	C	CT	1634.06	PASS	AB=0.964;AC=17;AF=0.304;AN=56;BaseQRankSum=-6.248;DP=594;FS=13.091;HRun=11;HaplotypeScore=64.2702;InbreedingCoeff=0.6036;MQ=55.73;MQ0=4;MQRankSum=-1.356;QD=7.60;ReadPosRankSum=0.069;VQSLOD=0.6130;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:31:57.82:0,58,427	0/1:9,0:9:12.88:13,0,58	0/0:15,1:5:5.97:0,6,46	0/1:16,1:10:14.40:14,0,56	0/0:26,0:26:36.13:0,36,380	0/0:15,0:14:14.05:0,14,253	0/0:15,0:16:34.84:0,35,257	0/0:18,0:17:25.91:0,26,192	0/0:16,0:17:40.87:0,41,305	0/1:18,3:21:0.65:1,0,179	0/1:17,0:18:1.32:1,0,163	0/0:14,0:15:25.90:0,26,192	0/0:22,1:24:22.25:0,22,346	0/0:25,0:25:53.70:0,54,411	1/1:4,24:26:22.08:403,22,0	1/1:5,12:17:26.79:256,27,0	0/0:31,0:34:52.93:0,53,521	1/1:5,10:15:4.71:223,5,0	1/1:12,9:16:23.87:217,24,0	1/1:8,18:26:22.01:373,22,0	1/1:5,13:18:30.06:305,30,0	0/1:24,0:24:12.30:12,0,216	0/0:15,0:14:16.77:0,17,196	0/0:34,1:34:35.22:0,35,452	0/0:20,0:20:32.81:0,33,255	0/0:31,2:32:23.25:0,23,364	0/0:22,0:21:26.80:0,27,209	0/0:14,0:13:26.89:0,27,209
chr10	14974702	.	GT	G	21496.17	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=7.775;DP=713;FS=0.568;HRun=3;HaplotypeScore=153.6649;InbreedingCoeff=0.9913;MQ=74.48;MQ0=0;MQRankSum=-4.695;QD=32.37;ReadPosRankSum=6.349;VQSLOD=3.6006;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,39:39:99:1244,102,0	1/1:0,10:10:27.08:334,27,0	0/0:32,0:32:93.29:0,93,1253	0/0:17,0:17:42.14:0,42,594	1/1:3,23:26:69.12:811,69,0	1/1:0,32:32:90.28:1113,90,0	1/1:1,21:22:48.15:588,48,0	1/1:3,23:26:63.13:737,63,0	1/1:2,36:38:93.29:1151,93,0	1/1:2,29:31:90.07:1036,90,0	1/1:2,20:22:57.18:705,57,0	1/1:1,21:22:63.20:780,63,0	1/1:2,25:27:66.21:817,66,0	1/1:0,22:22:60.19:742,60,0	1/1:3,25:28:75.24:929,75,0	1/1:0,22:22:57.05:700,57,0	1/1:1,23:24:66.21:818,66,0	1/1:1,25:26:66.21:817,66,0	1/1:3,17:20:54.16:657,54,0	1/1:0,26:26:75.08:875,75,0	1/1:0,31:31:87.27:1078,87,0	1/1:1,16:17:42.05:500,42,0	1/1:0,22:22:63.20:780,63,0	1/1:1,36:37:99:1299,105,0	1/1:0,23:23:63.20:780,63,0	1/1:1,28:29:84.24:1018,84,0	1/1:3,32:35:81.25:1002,81,0	1/1:0,7:7:15.05:186,15,0
chr10	14974823	.	A	AT	5404.64	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=2.919;DP=641;FS=4.616;HRun=8;HaplotypeScore=67.0174;InbreedingCoeff=0.9993;MQ=76.08;MQ0=0;MQRankSum=-0.293;QD=28.90;ReadPosRankSum=2.110;VQSLOD=5.3227;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,34:37:99:1142,99,0	0/0:10,0:10:26.98:0,27,241	0/0:17,0:16:34.23:0,34,297	0/0:12,0:12:29.93:0,30,254	0/0:31,0:33:94.12:0,94,836	0/0:20,0:20:57.01:0,57,516	0/0:17,0:17:48.01:0,48,434	0/0:30,0:30:72.03:0,72,659	0/0:25,0:25:75.04:0,75,686	0/0:30,0:30:87.04:0,87,794	0/0:26,0:25:69.03:0,69,631	1/1:3,16:19:48.14:550,48,0	1/1:7,16:23:51.07:571,51,0	1/1:1,20:21:54.16:623,54,0	0/0:30,0:30:81.03:0,81,737	0/0:21,0:21:60.02:0,60,545	0/0:18,0:18:48:0,48,433	0/0:17,0:17:48:0,48,433	0/0:22,0:22:51.02:0,51,467	0/0:28,0:28:75.02:0,75,682	0/0:22,0:22:60.03:0,60,549	1/1:1,26:27:72.17:814,72,0	1/1:6,18:24:54.16:623,54,0	1/1:2,19:21:32.72:630,33,0	1/1:1,14:15:39.12:450,39,0	0/0:28,0:28:66.01:0,66,601	0/0:37,0:37:99:0,105,951	0/0:11,0:11:23.99:0,24,220
chr10	14976345	.	G	GA	3536.92	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-6.826;DP=640;FS=2.430;HRun=6;HaplotypeScore=68.5671;InbreedingCoeff=0.9928;MQ=59.65;MQ0=5;MQRankSum=0.476;QD=27.63;ReadPosRankSum=1.929;VQSLOD=4.3922;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,126,1277	0/0:11,0:11:23.98:0,24,230	0/0:7,0:5:14.99:0,15,143	0/0:7,0:6:14.84:0,15,136	0/0:34,0:34:90.18:0,90,909	0/0:16,0:16:39.05:0,39,383	0/0:30,0:28:69.15:0,69,700	0/0:34,0:33:66.08:0,66,655	0/0:21,0:21:51.10:0,51,514	0/0:25,0:25:66.13:0,66,665	0/0:16,0:16:45.09:0,45,451	0/0:25,0:25:72.15:0,72,723	0/0:27,0:27:78.12:0,78,773	0/0:26,0:26:60.09:0,60,599	1/1:1,23:24:54.17:675,54,0	1/1:4,19:23:48.15:604,48,0	0/0:34,0:33:90.18:0,90,908	1/1:0,25:24:60.19:751,60,0	1/1:4,13:15:36.11:450,36,0	1/1:3,19:20:48.15:603,48,0	1/1:1,16:17:36.12:453,36,0	0/0:13,0:13:33.06:0,33,331	0/0:19,0:19:48.10:0,48,487	0/0:31,0:31:65.52:0,66,820	0/0:24,0:24:60.11:0,60,600	0/0:31,0:31:81.18:0,81,824	0/0:24,0:24:51.08:0,51,510	0/0:13,0:13:33.07:0,33,336
chr10	14976914	.	ATTT	A	4937.02	PASS	AB=0.630;AC=33;AF=0.589;AN=56;BaseQRankSum=-5.660;DP=508;FS=6.780;HRun=17;HaplotypeScore=95.0483;InbreedingCoeff=0.7094;MQ=70.40;MQ0=7;MQRankSum=-2.221;QD=14.96;ReadPosRankSum=2.846;VQSLOD=3.3672;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,20:30:21.65:507,22,0	1/1:0,4:4:9.02:92,9,0	0/0:25,0:14:17.75:0,18,153	0/0:22,0:17:3.82:0,4,112	0/0:11,0:18:12.05:0,12,121	0/0:6,0:22:35.39:0,35,278	0/0:7,0:17:33.95:0,34,274	0/1:12,14:26:0.87:297,0,1	1/1:5,10:17:26.60:246,27,0	1/1:6,14:21:44.78:450,45,0	1/1:2,5:7:10.45:107,10,0	1/1:9,10:21:38.68:370,39,0	1/1:7,9:17:26.70:261,27,0	1/1:7,9:16:20.54:214,21,0	0/0:17,0:17:0:0,0,1	0/0:14,0:14:0:0,0,1	1/1:13,16:32:35.83:381,36,0	0/0:8,0:7:0:0,0,0	0/0:10,0:10:0:0,0,1	0/0:7,0:7:0:0,0,1	0/0:15,0:14:0:0,0,1	1/1:1,8:9:17.88:185,18,0	1/1:6,8:14:14.68:154,15,0	1/1:5,22:26:50.79:523,51,0	1/1:7,8:15:20.86:215,21,0	1/1:13,15:31:40.32:439,40,0	1/1:8,11:21:33.87:326,34,0	1/1:1,6:16:9.04:168,9,0
chr10	14976929	.	TTTG	T	987.02	PASS	AB=0.986;AC=19;AF=0.432;AN=44;BaseQRankSum=9.478;DP=444;FS=29.634;HRun=0;HaplotypeScore=107.7119;InbreedingCoeff=-0.4937;MQ=56.82;MQ0=23;MQRankSum=2.582;QD=2.83;ReadPosRankSum=9.269;VQSLOD=-0.2243;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:43,0:42:64.19:64,0,241	1/1:4,0:4:7.31:29,7,0	0/0:18,0:9:14.23:0,14,85	0/1:11,0:6:17.98:18,0,47	0/0:19,0:18:17.40:0,17,261	0/0:25,0:23:45.68:0,46,471	0/0:27,0:24:65.69:0,66,564	0/1:24,0:21:55.36:68,0,55	0/1:21,1:21:62.59:63,0,170	0/1:19,1:20:76.23:100,0,76	0/1:14,0:12:0.98:1,0,72	0/1:19,1:19:54.14:151,0,54	0/1:15,1:16:62.33:166,0,62	0/1:21,0:18:29.35:29,0,158	./.	./.	0/1:25,1:26:76.58:84,0,77	./.	./.	./.	./.	0/1:9,0:9:2.81:32,0,3	0/1:12,0:12:18.34:18,0,68	0/1:32,0:30:49.24:95,0,49	0/1:17,0:16:31.82:32,0,94	0/1:24,0:24:61.91:62,0,106	0/1:16,0:16:4.62:91,0,5	0/1:18,0:16:21.08:21,0,68
chr10	14977248	.	G	GGCTGCT	5550.69	PASS	AB=0.548;AC=11;AF=0.196;AN=56;BaseQRankSum=-8.078;DP=751;FS=1.034;HRun=0;HaplotypeScore=160.1565;InbreedingCoeff=0.8656;MQ=77.40;MQ0=0;MQRankSum=-9.617;QD=33.85;ReadPosRankSum=-2.504;VQSLOD=4.4674;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:72.22:0,72,1380	0/0:9,0:9:21.07:0,21,459	0/0:28,0:27:60.01:0,60,1085	0/0:30,0:29:46.05:0,46,892	0/0:23,0:23:42.13:0,42,872	0/0:20,0:20:39.13:0,39,838	0/0:27,0:27:69.21:0,69,1427	0/0:34,0:34:57.18:0,57,1112	0/0:31,0:31:78.27:0,78,1636	0/0:33,0:33:45.13:0,45,907	0/0:8,0:8:15.04:0,15,253	0/0:30,0:30:84.29:0,84,1821	0/0:32,0:32:84.27:0,84,1666	0/0:29,0:29:72.23:0,72,1499	1/1:3,28:31:36.12:1196,36,0	0/1:6,25:34:9.40:1676,0,9	0/0:35,0:34:84.29:0,84,1729	1/1:4,21:26:27.09:919,27,0	1/1:10,12:22:45.10:887,45,0	1/1:15,8:25:24.04:669,24,0	1/1:11,12:26:5.63:204,6,0	0/0:23,0:23:33.58:0,34,687	0/0:16,0:16:18.06:0,18,358	0/0:41,0:41:99:0,108,2197	0/0:24,0:24:24.08:0,24,491	0/0:29,0:29:42.12:0,42,759	0/0:39,0:39:99:0,111,2294	0/0:10,0:10:21.07:0,21,466
chr10	14980122	.	GA	G	4582.42	PASS	AB=0.989;AC=37;AF=0.661;AN=56;BaseQRankSum=19.226;DP=818;FS=1.215;HRun=2;HaplotypeScore=156.6865;InbreedingCoeff=0.7446;MQ=74.04;MQ0=0;MQRankSum=-2.375;QD=7.59;ReadPosRankSum=6.267;VQSLOD=2.1779;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:59,1:60:78.67:519,79,0	1/1:14,0:14:36:139,36,0	0/0:12,0:12:36.12:0,36,573	0/0:15,0:15:42.14:0,42,649	1/1:27,1:28:44.49:282,44,0	1/1:29,0:29:56.91:228,57,0	1/1:31,0:31:26:205,26,0	0/1:38,0:38:87.77:95,0,88	1/1:33,0:33:55.03:288,55,0	0/1:35,0:35:3.99:201,0,4	1/1:21,1:22:6.20:171,6,0	1/1:36,0:36:37.22:263,37,0	1/1:20,0:20:50.42:188,50,0	1/1:33,1:34:63.82:347,64,0	0/0:30,0:30:87.28:0,87,1362	0/0:43,0:43:99:0,129,2008	1/1:20,0:20:3.92:141,4,0	0/0:21,0:21:60.20:0,60,954	0/0:14,0:14:42.13:0,42,627	0/0:29,0:29:84.27:0,84,1313	0/0:50,0:50:99:0,147,2229	1/1:29,1:30:66.47:281,66,0	1/1:19,1:20:48.70:192,49,0	1/1:55,0:55:33.32:347,33,0	1/1:17,0:17:16.10:122,16,0	1/1:33,0:34:63.39:251,63,0	0/1:28,1:29:57.16:151,0,57	1/1:19,0:19:45.91:173,46,0
chr10	14980123	.	AC	A	17850.29	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=17.083;DP=812;FS=3.863;HRun=5;HaplotypeScore=111.4105;InbreedingCoeff=0.9999;MQ=75.14;MQ0=0;MQRankSum=-2.800;QD=29.95;ReadPosRankSum=3.120;VQSLOD=4.5899;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,55:59:99:1835,162,0	1/1:0,14:14:42.12:476,42,0	0/0:12,0:12:36.12:0,36,493	0/0:17,0:17:48.10:0,48,616	1/1:2,26:28:81.09:874,81,0	1/1:0,29:29:66.19:748,66,0	1/1:0,29:29:84.24:953,84,0	1/1:5,32:37:93.20:1017,93,0	1/1:1,32:33:87.25:987,87,0	1/1:2,32:34:93.26:1047,93,0	1/1:3,19:22:60.13:665,60,0	1/1:1,34:35:96.27:1089,96,0	1/1:0,20:20:60.17:680,60,0	1/1:3,31:34:93.16:1036,93,0	0/0:30,0:30:87.26:0,87,1144	0/0:43,0:43:99:0,126,1691	1/1:2,18:20:54.15:612,54,0	0/0:21,0:21:60.19:0,60,803	0/0:14,0:14:36.10:0,36,462	0/0:30,0:30:84.26:0,84,1128	0/0:49,0:49:99:0,138,1806	1/1:1,29:30:81.22:908,81,0	1/1:1,18:20:57.16:646,57,0	1/1:3,52:55:99:1497,132,0	1/1:1,16:17:45.13:510,45,0	1/1:1,33:34:99:1080,99,0	1/1:4,23:27:51.14:577,51,0	1/1:0,19:19:54.15:612,54,0
chr10	14980936	.	G	GCAC	20402.98	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=13.268;DP=663;FS=1.394;HRun=0;HaplotypeScore=144.0359;InbreedingCoeff=0.9674;MQ=84.59;MQ0=0;MQRankSum=-16.508;QD=48.23;ReadPosRankSum=4.011;VQSLOD=6.8041;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,30:34:66.23:1582,66,0	1/1:0,9:11:18.06:433,18,0	0/0:32,0:32:96.05:0,96,1336	0/0:20,0:20:53.72:0,54,639	1/1:1,13:15:15.05:358,15,0	1/1:0,15:15:36.12:867,36,0	1/1:0,29:31:66.23:1592,66,0	1/1:2,20:24:58.37:990,58,0	1/1:1,19:20:45.15:1086,45,0	1/1:3,19:24:59.49:1119,59,0	1/1:2,11:14:21.07:474,21,0	1/1:0,38:40:99:2450,102,0	1/1:2,30:33:65.87:1540,66,0	1/1:1,36:38:90.31:2184,90,0	0/0:29,0:29:87.18:0,87,1456	0/0:32,0:32:96.30:0,96,1718	1/1:0,15:15:26.84:658,27,0	0/0:30,0:30:84.22:0,84,1410	0/0:24,0:24:69.20:0,69,1170	0/0:15,0:13:36.02:0,36,484	0/0:58,0:58:99:0,162,2649	1/1:0,13:15:21.07:500,21,0	1/1:0,8:10:8.95:209,9,0	1/1:2,17:20:35.80:872,36,0	1/1:0,17:18:39.13:927,39,0	1/1:1,16:17:44.54:912,45,0	1/1:0,23:26:63.22:1503,63,0	1/1:0,3:3:6.02:147,6,0
chr10	14981316	.	C	CTCTTG	42772.25	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-14.462;DP=822;FS=6.911;HRun=0;HaplotypeScore=135.8190;InbreedingCoeff=0.9996;MQ=81.22;MQ0=0;MQRankSum=-12.383;QD=76.52;ReadPosRankSum=0.955;VQSLOD=6.6937;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,41:48:99:3526,126,0	1/1:1,9:10:27.09:844,27,0	0/0:22,0:22:57.20:0,57,1209	0/0:31,0:31:84.27:0,84,1635	1/1:2,13:17:36.08:936,36,0	1/1:4,18:22:54.18:1627,54,0	1/1:9,27:39:96.33:2910,96,0	1/1:8,22:32:90.30:2645,90,0	1/1:4,34:38:96.33:2962,96,0	1/1:3,25:31:84.26:2490,84,0	1/1:2,8:10:27.09:784,27,0	1/1:3,46:50:99:4076,132,0	1/1:8,27:35:87.30:2649,87,0	1/1:5,36:41:99:3428,117,0	0/0:43,0:43:99:0,129,2688	0/0:39,0:39:99:0,114,2359	1/1:1,25:28:66.23:2067,66,0	0/0:22,0:22:63.22:0,63,1343	0/0:19,0:19:45.13:0,45,886	0/0:18,0:18:48.16:0,48,1023	0/0:69,0:69:99:0,202,4203	1/1:2,19:23:57.15:1709,57,0	1/1:4,10:15:35.82:884,36,0	1/1:2,33:36:90.29:2695,90,0	1/1:2,16:19:45.15:1292,45,0	1/1:5,26:32:90.31:2636,90,0	1/1:1,18:21:51.18:1585,51,0	1/1:0,10:12:33.11:1026,33,0
chr10	14981780	.	C	CGGGGG	13050.37	PASS	AB=1.000;AC=41;AF=0.732;AN=56;BaseQRankSum=1.538;DP=432;FS=11.971;HRun=2;HaplotypeScore=97.7572;InbreedingCoeff=0.8437;MQ=46.74;MQ0=27;MQRankSum=-6.058;QD=40.91;ReadPosRankSum=4.111;VQSLOD=1.1586;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:14,11:26:41.73:1061,42,0	1/1:0,4:6:12.04:319,12,0	0/0:27,0:4:7.48:0,7,129	0/1:35,0:9:15.49:15,0,123	1/1:17,1:21:39.13:976,39,0	1/1:11,1:15:30.07:616,30,0	1/1:4,1:12:21.07:555,21,0	1/1:9,4:14:38.45:940,38,0	1/1:7,2:9:27.09:596,27,0	1/1:8,5:10:30.09:725,30,0	1/1:7,3:10:18.06:454,18,0	1/1:5,7:13:30.09:731,30,0	1/1:11,7:16:39.13:899,39,0	1/1:7,6:12:21.07:530,21,0	0/0:8,0:8:4.25:0,4,59	0/0:15,0:14:36.12:0,36,719	1/1:4,10:15:24.08:606,24,0	0/0:23,0:23:37.01:0,37,709	0/0:8,0:8:24.08:0,24,475	0/0:11,0:10:20.67:0,21,400	0/0:19,0:18:27.07:0,27,488	1/1:4,4:9:21.07:598,21,0	1/1:9,7:15:24.08:603,24,0	1/1:8,5:10:20.81:468,21,0	1/1:7,4:13:12.04:315,12,0	1/1:16,7:23:54.17:1287,54,0	1/1:6,3:9:21.07:560,21,0	1/1:5,0:4:9.03:197,9,0
chr10	14984085	.	T	TG	16716.79	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-15.157;DP=708;FS=5.231;HRun=4;HaplotypeScore=71.2688;InbreedingCoeff=0.9999;MQ=78.22;MQ0=0;MQRankSum=-3.591;QD=34.33;ReadPosRankSum=3.137;VQSLOD=5.5706;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,42:45:99:1528,114,0	1/1:0,14:14:30.10:410,30,0	0/0:36,0:35:56.66:0,57,763	0/0:25,0:24:55.46:0,55,537	1/1:1,26:27:66.45:936,66,0	1/1:1,14:15:39.13:533,39,0	1/1:1,13:14:39.13:528,39,0	1/1:2,34:36:99:1281,102,0	1/1:2,15:17:45.15:614,45,0	1/1:1,26:27:78.22:1023,78,0	1/1:1,30:31:87.03:1095,87,0	1/1:2,29:31:72.24:981,72,0	1/1:2,24:26:60.10:819,60,0	1/1:0,20:20:57.19:778,57,0	0/0:20,0:20:51.13:0,51,568	0/0:26,0:26:75.18:0,75,819	1/1:1,33:34:84.28:1147,84,0	0/0:26,0:26:78.15:0,78,847	0/0:30,0:31:80.85:0,81,865	0/0:23,0:23:63.14:0,63,684	0/0:34,0:34:99:0,99,1083	1/1:0,20:20:60.03:771,60,0	1/1:2,21:23:58.65:742,59,0	1/1:2,17:19:39.04:508,39,0	1/1:0,25:25:60.14:793,60,0	1/1:1,22:23:63.19:840,63,0	1/1:3,21:25:60.09:815,60,0	1/1:1,14:15:42.14:574,42,0
chr10	14985424	.	TC	T	19194.22	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=12.512;DP=705;FS=7.476;HRun=1;HaplotypeScore=69.6317;InbreedingCoeff=0.9997;MQ=81.13;MQ0=0;MQRankSum=-3.783;QD=38.70;ReadPosRankSum=2.620;VQSLOD=5.4682;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,44:44:99:1720,123,0	1/1:0,9:9:27.09:378,27,0	0/0:17,0:17:51.16:0,51,783	0/0:18,0:18:50.76:0,51,723	1/1:0,23:23:66.19:897,66,0	1/1:0,20:20:60.20:839,60,0	1/1:0,45:45:99:1762,126,0	1/1:0,27:27:78.25:1073,78,0	1/1:0,20:20:54.18:755,54,0	1/1:0,32:32:90.15:1182,90,0	1/1:0,15:15:33.07:439,33,0	1/1:0,30:30:81.27:1131,81,0	1/1:0,20:20:57.19:797,57,0	1/1:0,34:34:96.32:1342,96,0	0/0:28,0:28:84.27:0,84,1314	0/0:23,0:23:69.14:0,69,1044	1/1:0,37:37:99:1426,102,0	0/0:32,0:32:93.32:0,93,1484	0/0:20,0:20:60.15:0,60,906	0/0:21,0:21:63.21:0,63,1000	0/0:50,0:50:99:0,141,2195	1/1:0,17:17:48.16:671,48,0	1/1:0,11:11:33.11:461,33,0	1/1:1,31:32:81.27:1133,81,0	1/1:0,26:26:69.23:965,69,0	1/1:0,18:18:54.18:755,54,0	1/1:0,26:26:75.25:1049,75,0	1/1:0,10:10:30.10:419,30,0
chr10	14985875	.	GT	G	4985.01	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=2.791;DP=626;FS=7.084;HRun=2;HaplotypeScore=71.5476;InbreedingCoeff=0.9946;MQ=81.86;MQ0=0;MQRankSum=-1.652;QD=35.86;ReadPosRankSum=3.007;VQSLOD=5.4094;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,135,1975	0/0:6,0:6:18.06:0,18,270	0/0:25,0:24:66.22:0,66,978	0/0:16,0:16:42.14:0,42,596	0/0:10,0:10:30.10:0,30,447	0/0:17,0:17:51.17:0,51,759	0/0:30,0:30:90.26:0,90,1302	0/0:35,0:35:87.27:0,87,1245	0/0:26,0:26:72.24:0,72,1079	0/0:27,0:27:81.26:0,81,1176	0/0:7,0:7:18.06:0,18,270	0/0:26,0:26:75.25:0,75,1119	0/0:27,0:27:78.25:0,78,1143	0/0:30,0:30:87.28:0,87,1283	1/1:0,32:32:87.28:1130,87,0	1/1:0,23:23:66.21:857,66,0	0/0:31,0:31:93.31:0,93,1391	1/1:0,21:21:63.20:818,63,0	1/1:1,14:15:42.14:544,42,0	1/1:0,9:9:24.08:312,24,0	1/1:1,38:39:99:1324,102,0	0/0:18,0:18:51.17:0,51,759	0/0:6,0:6:18.04:0,18,224	0/0:27,0:27:81.26:0,81,1194	0/0:14,0:14:42.12:0,42,607	0/0:22,0:22:66.22:0,66,988	0/0:28,0:28:84.28:0,84,1252	0/0:13,0:13:39.13:0,39,579
chr10	14987445	.	A	AT	2485.96	PASS	AB=0.615;AC=11;AF=0.196;AN=56;BaseQRankSum=-10.982;DP=614;FS=4.589;HRun=9;HaplotypeScore=60.9944;InbreedingCoeff=0.8653;MQ=80.66;MQ0=0;MQRankSum=-0.527;QD=20.55;ReadPosRankSum=-0.815;VQSLOD=3.9714;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:92.90:0,93,807	0/0:4,0:4:12:0,12,104	0/0:17,0:17:23.58:0,24,191	0/0:20,0:20:10.35:0,10,235	0/0:13,0:13:23.97:0,24,208	0/0:22,0:22:62.98:0,63,547	0/0:24,1:25:26.78:0,27,457	0/0:34,0:34:59.92:0,60,521	0/0:20,0:20:53.99:0,54,469	0/0:21,0:21:47.97:0,48,417	0/0:17,0:17:29.97:0,30,260	0/0:32,1:33:59.77:0,60,744	0/0:23,0:23:62.97:0,63,547	0/0:32,0:32:74.94:0,75,651	1/1:6,18:25:22.03:458,22,0	1/1:3,15:18:19.07:439,19,0	0/0:47,0:47:99:0,117,1010	1/1:2,21:23:60.14:653,60,0	0/1:6,10:16:19.02:258,0,19	1/1:2,9:12:27.07:299,27,0	1/1:4,22:27:47.18:558,47,0	0/0:10,0:10:23.97:0,24,205	0/0:15,0:15:41.99:0,42,364	0/0:31,0:31:54.29:0,54,696	0/0:10,0:10:20.98:0,21,182	0/0:18,0:19:53.02:0,53,448	0/0:30,1:30:47.80:0,48,643	0/0:8,0:8:14.99:0,15,130
chr10	14989206	.	TA	T	26403.91	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=0.493;DP=716;FS=7.912;HRun=1;HaplotypeScore=139.4162;InbreedingCoeff=0.9656;MQ=79.56;MQ0=0;MQRankSum=-9.832;QD=38.89;ReadPosRankSum=5.842;VQSLOD=3.4333;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,33:33:90.30:1258,90,0	1/1:0,4:4:9.03:126,9,0	0/0:15,0:15:45.12:0,45,661	0/0:22,0:22:55.74:0,56,794	1/1:0,11:11:33.04:437,33,0	1/1:0,29:29:84.27:1172,84,0	1/1:0,20:20:57.19:789,57,0	1/1:0,24:24:72.20:952,72,0	1/1:0,28:28:81.27:1131,81,0	1/1:0,24:24:72.24:1004,72,0	1/1:0,10:10:24.08:336,24,0	1/1:0,45:45:99:1803,129,0	1/1:0,30:30:84.28:1174,84,0	1/1:0,37:37:99:1381,99,0	1/1:0,35:35:87.16:1215,87,0	1/1:0,31:31:87.29:1210,87,0	1/1:0,40:40:99:1677,120,0	1/1:0,27:27:78.26:1091,78,0	1/1:0,18:18:54.18:755,54,0	1/1:0,12:12:33.11:461,33,0	1/1:0,71:71:99:2685,193,0	1/1:0,17:17:44.90:628,45,0	1/1:0,15:15:42.14:587,42,0	1/1:0,40:40:99:1384,99,0	1/1:0,20:20:57.19:797,57,0	1/1:0,23:23:66.19:888,66,0	1/1:0,29:29:87.29:1211,87,0	1/1:0,6:6:18.06:252,18,0
chr10	14989466	.	A	AT	15269.67	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=20.914;DP=791;FS=1.159;HRun=2;HaplotypeScore=174.4357;InbreedingCoeff=0.9993;MQ=83.37;MQ0=0;MQRankSum=-7.165;QD=38.27;ReadPosRankSum=-0.412;VQSLOD=4.1166;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,153,1969	1/1:1,9:10:24.08:359,24,0	0/0:25,0:25:72.22:0,72,903	0/0:27,0:27:78.15:0,78,965	0/0:13,0:13:36.12:0,36,467	0/0:23,0:23:69.22:0,69,893	0/0:36,0:36:96.30:0,96,1231	1/1:4,36:40:99:1682,117,0	1/1:3,26:29:78.23:1136,78,0	1/1:3,21:24:66.18:956,66,0	1/1:1,8:9:24.08:348,24,0	0/0:52,0:52:99:0,150,1932	0/0:35,0:35:99:0,105,1359	0/0:35,0:35:99:0,105,1362	1/1:1,30:31:90.30:1347,90,0	1/1:0,31:31:87.28:1300,87,0	1/1:1,32:33:66.18:964,66,0	1/1:2,27:29:78.24:1142,78,0	1/1:6,22:28:72.15:1021,72,0	1/1:1,13:14:30.10:441,30,0	1/1:4,49:53:99:1847,129,0	0/0:15,0:15:42.14:0,42,545	0/0:17,0:17:45.15:0,45,584	0/0:39,0:39:99:0,117,1518	0/0:21,0:21:60.19:0,60,775	1/1:1,19:20:51.17:764,51,0	1/1:3,28:31:87.29:1292,87,0	1/1:0,17:17:45.15:672,45,0
chr10	14990083	.	C	CA	1017.35	PASS	AB=0.637;AC=16;AF=0.286;AN=56;BaseQRankSum=12.436;DP=467;FS=0.497;HRun=0;HaplotypeScore=101.4687;InbreedingCoeff=0.4844;MQ=71.18;MQ0=0;MQRankSum=-11.595;QD=6.97;ReadPosRankSum=1.157;VQSLOD=3.6439;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,5:16:16.41:98,16,0	0/0:1,0:1:3.01:0,3,42	0/0:13,0:13:39.04:0,39,498	0/0:11,0:11:32.08:0,32,321	1/1:3,3:6:7.46:31,7,0	0/1:4,7:11:8.63:126,0,9	0/1:16,10:27:10.11:217,0,10	0/0:17,0:17:45.11:0,45,565	0/0:13,0:13:39.12:0,39,527	0/0:16,0:16:45.14:0,45,610	0/0:5,0:5:14.99:0,15,168	0/1:8,16:24:13.54:206,0,14	0/1:6,7:13:13.82:54,0,14	1/1:9,5:14:20.51:147,21,0	0/0:14,0:14:42.13:0,42,571	0/0:19,0:19:57.18:0,57,781	0/0:45,0:45:99:0,132,1646	0/0:38,0:38:99:0,114,1477	0/0:16,0:16:45.07:0,45,554	0/0:5,0:5:15.05:0,15,208	0/0:70,0:70:99:0,199,2650	1/1:2,5:7:14.90:113,15,0	1/1:3,4:7:11.51:74,12,0	0/1:7,8:15:10.46:72,0,10	0/1:2,4:6:4.63:60,0,5	0/0:13,0:13:33.10:0,33,437	0/0:18,0:16:54.15:0,54,731	0/0:7,0:7:21.06:0,21,275
chr10	14990085	.	C	CCCCAG	6221.21	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=13.766;DP=485;FS=0.000;HRun=0;HaplotypeScore=123.9309;InbreedingCoeff=0.9429;MQ=72.02;MQ0=0;MQRankSum=-12.871;QD=38.88;ReadPosRankSum=-2.078;VQSLOD=4.3599;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,6:19:24.08:614,24,0	0/0:2,0:2:3.01:0,3,60	0/0:15,0:15:11.09:0,11,647	0/0:11,0:11:17.92:0,18,396	1/1:2,2:7:9.03:217,9,0	1/1:0,7:11:24.08:596,24,0	1/1:4,10:31:54.14:1182,54,0	0/0:15,0:15:42.13:0,42,784	0/0:14,0:14:39.13:0,39,797	0/0:17,0:17:45.04:0,45,879	0/0:5,0:5:15.05:0,15,267	1/1:0,15:24:48.14:1135,48,0	1/1:6,7:15:21.07:406,21,0	1/1:3,5:14:24.08:597,24,0	0/0:13,0:13:39.13:0,39,810	0/0:22,0:22:60.19:0,60,1196	0/0:46,0:46:99:0,129,2464	0/0:37,0:37:99:0,105,2085	0/0:16,0:16:45.15:0,45,824	0/0:5,0:5:15.05:0,15,314	0/0:69,0:69:99:0,195,3844	1/1:2,5:8:21.03:473,21,0	1/1:0,4:7:12.04:323,12,0	1/1:3,8:18:17.21:391,17,0	1/1:2,4:6:12.04:287,12,0	0/0:13,0:13:36.12:0,36,705	0/0:18,0:16:54.16:0,54,1052	0/0:7,0:7:21.07:0,21,412
chr10	14991281	.	CGCCCAGTGAAAGCAAAGATGGCGGCG	C	10356.30	PASS	AC=10;AF=0.185;AN=54;BaseQRankSum=11.295;DP=547;FS=14.957;HRun=0;HaplotypeScore=363.4146;InbreedingCoeff=0.9690;MQ=75.84;MQ0=0;MQRankSum=-11.528;QD=90.84;ReadPosRankSum=4.403;VQSLOD=3.2394;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:78.23:0,78,7015	0/0:7,0:7:21.07:0,21,2257	0/0:13,0:13:33.11:0,33,2106	0/0:12,0:12:30.10:0,30,1872	0/0:10,0:10:30.10:0,30,3158	0/0:18,0:18:51.16:0,51,4978	0/0:37,0:37:99:0,99,9776	0/0:15,0:15:36.12:0,36,2952	0/0:34,0:34:99:0,102,10779	0/0:18,0:18:54.17:0,54,4316	0/0:5,0:5:12.04:0,12,844	0/0:28,0:28:78.27:0,78,8091	0/0:27,0:27:78.27:0,78,8160	0/0:44,0:44:99:0,123,12494	1/1:5,23:28:60.21:4210,60,0	1/1:14,17:31:38.86:2530,39,0	0/0:34,0:34:96.33:0,96,10321	1/1:5,12:17:33.11:2200,33,0	1/1:8,3:11:9.03:632,9,0	./.	1/1:16,11:27:12.51:784,13,0	0/0:14,0:14:36.12:0,36,3431	0/0:6,0:6:18.06:0,18,1598	0/0:25,0:25:72.25:0,72,8183	0/0:11,0:11:33.10:0,33,2577	0/0:14,0:14:39.13:0,39,3676	0/0:18,0:18:54.19:0,54,5821	0/0:11,0:11:33.11:0,33,3600
chr10	14993743	.	AAC	A	5283.41	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=7.440;DP=671;FS=8.853;HRun=0;HaplotypeScore=87.7579;InbreedingCoeff=0.9993;MQ=81.85;MQ0=0;MQRankSum=-2.236;QD=38.57;ReadPosRankSum=2.517;VQSLOD=6.4917;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,160,2844	0/0:9,0:9:24.08:0,24,439	0/0:24,0:24:69.23:0,69,1197	0/0:12,0:12:29.94:0,30,439	0/0:17,0:17:51.17:0,51,922	0/0:21,0:21:60.18:0,60,1058	0/0:33,0:33:96.33:0,96,1748	0/0:22,0:22:66.23:0,66,1200	0/0:26,0:26:72.25:0,72,1320	0/0:28,0:28:81.27:0,81,1444	0/0:24,0:24:72.25:0,72,1313	0/0:31,0:31:90.31:0,90,1633	0/0:15,0:15:45.11:0,45,761	0/0:29,0:29:87.28:0,87,1561	1/1:0,17:17:51.17:731,51,0	1/1:0,18:18:48.16:688,48,0	0/0:29,0:29:84.29:0,84,1510	1/1:0,29:29:75.25:1075,75,0	1/1:1,22:23:66.22:941,66,0	1/1:2,18:20:51.17:731,51,0	1/1:2,28:30:78.26:1118,78,0	0/0:28,0:28:81.28:0,81,1484	0/0:11,0:11:30.10:0,30,550	0/0:25,0:25:72.23:0,72,1288	0/0:22,0:22:66.23:0,66,1210	0/0:30,0:30:84.26:0,84,1480	0/0:27,0:26:78.24:0,78,1360	0/0:16,0:16:36.08:0,36,625
chr10	14994887	.	TG	T	5576.73	PASS	AB=0.519;AC=11;AF=0.196;AN=56;BaseQRankSum=14.815;DP=731;FS=3.317;HRun=3;HaplotypeScore=81.1231;InbreedingCoeff=0.9018;MQ=84.71;MQ0=0;MQRankSum=-6.652;QD=32.24;ReadPosRankSum=1.278;VQSLOD=5.2251;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,147,2037	0/0:8,0:8:21.07:0,21,302	0/0:29,0:29:72.08:0,72,948	0/0:21,0:21:57.14:0,57,769	0/0:18,0:18:54.16:0,54,742	0/0:25,0:25:75.25:0,75,1080	0/0:22,0:22:66.22:0,66,951	0/0:21,0:21:60.19:0,60,848	0/0:35,0:35:96.32:0,96,1372	0/0:21,0:21:54.18:0,54,776	0/0:12,0:12:33.11:0,33,474	0/0:36,0:36:99:0,108,1552	0/0:30,0:30:90.28:0,90,1273	0/0:41,0:41:99:0,117,1667	1/1:1,27:28:72.23:893,72,0	1/1:1,38:39:59.11:1184,59,0	0/0:31,0:31:93.30:0,93,1319	0/1:2,26:28:8.17:814,0,8	1/1:1,25:26:78.20:938,78,0	1/1:0,17:17:45.14:557,45,0	1/1:2,33:35:96.30:1190,96,0	0/0:22,0:22:63.21:0,63,902	0/0:18,0:18:54.18:0,54,777	0/0:30,0:30:87.24:0,87,1212	0/0:22,0:22:66.22:0,66,949	0/0:28,0:28:84.27:0,84,1192	0/0:27,0:27:78.23:0,78,1083	0/0:12,0:12:33.11:0,33,473
chr10	14996476	.	GGCCAGTACGACCATCCATTA	G	3499.96	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.108;DP=700;FS=3.836;HRun=0;HaplotypeScore=348.6573;InbreedingCoeff=0.9632;MQ=82.33;MQ0=0;MQRankSum=-6.970;QD=57.38;ReadPosRankSum=0.874;VQSLOD=2.3305;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:93.32:0,93,8321	0/0:6,0:6:15.05:0,15,999	0/0:17,0:17:42.59:0,43,2289	0/0:23,0:22:56.85:0,57,3848	1/1:7,10:17:14.95:333,15,0	1/1:2,13:15:12.04:667,12,0	1/1:10,19:29:45.15:2500,45,0	0/0:28,0:28:69.24:0,69,5499	0/0:31,0:31:87.30:0,87,7567	0/0:21,0:21:45.15:0,45,3619	0/0:12,0:12:33.10:0,33,2043	0/0:50,0:50:99:0,141,12358	0/0:36,0:36:99:0,105,9377	0/0:40,0:40:99:0,120,10110	0/0:28,0:28:78.27:0,78,7134	0/0:37,0:37:99:0,111,9634	0/0:33,0:33:96.33:0,96,8170	0/0:22,0:22:60.21:0,60,5541	0/0:18,0:18:45.15:0,45,3142	0/0:12,0:12:15.05:0,15,1428	0/0:76,0:76:99:0,199,16737	0/0:14,0:14:33.11:0,33,2938	0/0:10,0:10:18.06:0,18,1371	0/0:35,0:35:96.30:0,96,8347	0/0:16,0:16:42.14:0,42,3175	0/0:17,0:17:36.12:0,36,2506	0/0:18,0:18:54.14:0,54,4356	0/0:5,0:5:15.05:0,15,1105
chr10	14998332	.	TTC	T	2509.84	PASS	AB=1.000;AC=37;AF=0.740;AN=50;BaseQRankSum=-0.252;DP=552;FS=0.000;HRun=0;HaplotypeScore=107.5530;InbreedingCoeff=0.2725;MQ=63.07;MQ0=28;MQRankSum=1.774;QD=5.72;ReadPosRankSum=1.290;VQSLOD=2.7104;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:29:28.90:176,0,29	0/1:8,0:8:19.56:31,0,20	0/0:27,0:16:1.55:0,2,4	0/0:31,0:16:8.46:0,8,71	0/0:11,0:14:8.76:0,9,40	0/1:23,0:25:45.71:101,0,46	0/0:21,0:28:16.75:0,17,179	1/1:22,11:33:10.20:288,10,0	1/1:19,0:19:17.83:128,18,0	1/1:27,0:23:27.97:235,28,0	0/1:15,0:13:23.11:23,0,28	1/1:21,0:21:17.82:130,18,0	1/1:19,0:18:22.18:140,22,0	1/1:20,0:19:28.60:198,29,0	1/1:6,4:10:6.02:65,6,0	1/1:5,1:6:6.02:67,6,0	1/1:37,1:35:18.73:152,19,0	./.	./.	./.	1/1:9,3:11:2.80:34,3,0	1/1:12,0:12:6.74:42,7,0	0/1:21,0:21:42.86:85,0,43	1/1:23,0:22:30.33:192,30,0	1/1:20,0:19:23.27:146,23,0	1/1:22,0:22:32.05:211,32,0	1/1:22,2:22:4:153,4,0	1/1:31,0:28:3.76:68,4,0
chr10	14998355	.	TCTCTCTCC	T	2090.88	PASS	AB=0.990;AC=20;AF=0.370;AN=54;BaseQRankSum=-3.460;DP=550;FS=20.385;HRun=0;HaplotypeScore=154.4866;InbreedingCoeff=0.1657;MQ=50.67;MQ0=31;MQRankSum=-3.670;QD=6.04;ReadPosRankSum=-0.251;VQSLOD=1.5201;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:31:19.12:0,19,582	1/1:6,0:6:9:97,9,0	0/0:11,0:3:3.48:0,3,31	0/0:29,0:11:11.70:0,12,100	0/0:13,0:13:15.38:0,15,201	0/1:34,0:33:54.88:55,0,737	0/1:32,0:31:57.91:58,0,375	0/1:36,0:35:57.32:199,0,57	0/1:19,0:19:3.97:117,0,4	0/1:25,0:21:36.46:289,0,36	0/1:16,1:15:29.16:167,0,29	0/0:23,0:23:24.07:0,24,380	0/1:21,1:21:59.91:60,0,256	0/0:23,0:22:7.66:0,8,375	0/0:8,0:8:12.38:0,12,71	0/0:3,0:3:8.81:0,9,74	1/1:37,1:35:8.84:302,9,0	./.	0/0:5,0:2:3:0,3,27	0/1:1,0:1:0:0,0,0	0/0:7,0:5:5.49:0,5,35	0/1:15,0:14:8.07:8,0,167	0/1:24,0:24:24.59:25,0,364	0/0:26,0:25:35.63:0,36,476	0/0:24,0:22:2.83:0,3,321	1/1:22,1:23:34.78:452,35,0	1/1:25,1:24:32.37:315,32,0	1/1:28,0:25:14.89:118,15,0
chr10	14998357	.	TCTCTCC	T	4628.92	PASS	AB=0.993;AC=30;AF=0.556;AN=54;BaseQRankSum=-9.103;DP=541;FS=27.535;HRun=0;HaplotypeScore=129.7632;InbreedingCoeff=0.0236;MQ=50.72;MQ0=30;MQRankSum=-0.163;QD=10.82;ReadPosRankSum=-2.320;VQSLOD=1.8283;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:31:33.24:0,33,318	1/1:1,5:6:8.86:155,9,0	0/0:10,0:3:2.03:0,2,5	0/0:29,0:11:11.60:0,12,90	0/0:13,0:13:10.18:0,10,67	0/1:34,0:33:97.90:98,0,228	0/1:30,0:29:59.60:60,0,314	1/1:31,0:30:45.61:558,46,0	1/1:3,18:21:18.06:417,18,0	1/1:8,15:19:50.93:618,51,0	1/1:9,8:15:4.75:130,5,0	0/0:23,0:23:20.38:0,20,175	0/1:24,0:23:72.02:72,0,73	0/1:23,1:23:50.31:50,0,150	0/1:8,0:8:29.95:52,0,30	0/1:3,0:3:18.48:34,0,18	1/1:14,22:33:19.30:475,19,0	./.	0/0:6,0:3:2.97:0,3,20	0/1:1,0:1:0:0,0,0	0/1:7,0:5:19.98:28,0,20	0/1:13,0:12:14.44:14,0,50	0/1:22,0:22:75.65:76,0,139	0/1:28,0:27:12.18:12,0,153	0/1:23,1:22:56.47:56,0,137	1/1:2,21:23:63.04:871,63,0	1/1:8,18:24:4.12:583,4,0	1/1:9,18:24:3.63:269,4,0
chr10	14998361	.	TCC	T	5320.82	PASS	AB=0.942;AC=39;AF=0.722;AN=54;BaseQRankSum=-1.656;DP=530;FS=0.000;HRun=3;HaplotypeScore=102.9598;InbreedingCoeff=0.1396;MQ=48.21;MQ0=28;MQRankSum=2.226;QD=10.93;ReadPosRankSum=4.754;VQSLOD=1.5898;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:4,28:31:0.66:434,0,1	0/1:6,0:6:16.68:35,0,17	1/1:10,0:3:2.84:25,3,0	0/0:28,0:8:4.98:0,5,62	1/1:10,2:12:9.84:52,10,0	1/1:32,3:33:1.37:460,1,0	0/1:35,0:34:99:176,0,106	1/1:34,0:33:30.48:372,30,0	1/1:18,0:18:17.86:128,18,0	1/1:21,0:18:46.38:337,46,0	0/1:15,0:14:43.16:43,0,47	1/1:0,22:22:20.96:288,21,0	1/1:2,22:23:23.44:304,23,0	1/1:5,19:23:28.54:391,29,0	0/0:8,0:8:2.47:0,2,58	0/1:4,0:4:10.67:11,0,21	1/1:30,0:29:15.12:163,15,0	./.	0/0:5,0:2:2.97:0,3,20	0/1:1,0:1:0:0,0,0	0/1:7,0:5:2.99:3,0,21	1/1:13,2:14:23.78:231,24,0	1/1:17,5:22:28.39:401,28,0	1/1:4,23:26:32.89:428,33,0	1/1:4,18:20:23.34:319,23,0	1/1:22,0:22:61.04:481,61,0	0/1:25,0:23:23.61:165,0,24	0/1:23,0:20:19.02:73,0,19
chr10	14998962	.	A	AAC	1077.82	PASS	AB=0.792;AC=8;AF=0.167;AN=48;BaseQRankSum=-6.788;DP=597;FS=5.054;HRun=0;HaplotypeScore=110.2539;InbreedingCoeff=-0.1778;MQ=59.88;MQ0=10;MQRankSum=4.053;QD=5.79;ReadPosRankSum=-1.340;VQSLOD=2.1354;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:25,10:35:85.58:195,0,86	0/0:6,0:6:2.84:0,3,14	./.	./.	0/0:7,0:14:5.60:0,6,28	0/0:7,0:9:5.52:0,6,28	0/0:16,0:24:8.52:0,9,42	./.	0/0:10,0:25:34:0,34,167	0/0:12,0:14:8.58:0,9,50	0/0:7,0:11:11.36:0,11,56	0/1:21,4:26:35.41:35,0,55	0/1:14,9:24:17.24:163,0,17	0/1:16,3:21:7.34:119,0,7	0/0:12,0:22:28.36:0,28,139	0/0:17,0:27:34.52:0,35,168	0/0:12,0:23:22.53:0,23,105	0/0:17,0:19:3.30:0,3,34	0/0:11,0:12:5.68:0,6,28	0/0:10,0:16:14.20:0,14,70	./.	0/1:8,2:10:75.68:143,0,76	0/1:9,2:11:23.38:80,0,23	0/1:18,17:38:20.49:348,0,20	0/1:17,4:21:43.14:118,0,43	0/0:15,0:15:0.47:0,0,1	0/0:15,0:26:16.41:0,16,75	0/0:1,0:3:2.84:0,3,14
chr10	14999022	.	T	TA	5543.31	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-4.386;DP=630;FS=6.980;HRun=4;HaplotypeScore=98.4586;InbreedingCoeff=0.9609;MQ=69.37;MQ0=2;MQRankSum=-1.120;QD=37.20;ReadPosRankSum=-0.614;VQSLOD=3.9139;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,114,1281	0/0:7,0:7:21.06:0,21,238	0/0:17,0:14:27.31:0,27,234	0/0:16,1:15:2.57:0,3,174	0/0:22,0:22:57.15:0,57,635	0/0:20,0:20:54.13:0,54,600	0/0:26,0:26:54.14:0,54,602	0/0:27,0:27:75.13:0,75,816	0/0:26,0:26:57.16:0,57,645	0/0:21,0:21:63.17:0,63,706	0/0:10,0:10:27.08:0,27,305	0/0:24,0:24:54.14:0,54,607	0/0:27,0:27:63.18:0,63,714	0/0:21,0:21:63.16:0,63,703	1/1:3,29:32:90.30:1218,90,0	1/1:4,25:29:44.25:988,44,0	0/0:29,0:28:72.13:0,72,790	1/1:2,19:20:54.18:737,54,0	1/1:0,19:19:57.15:758,57,0	1/1:0,13:13:36.03:449,36,0	1/1:0,35:35:99:1394,102,0	0/0:12,0:12:33.09:0,33,366	0/0:12,0:12:36.10:0,36,406	0/0:46,0:46:99:0,123,1393	0/0:17,0:17:48.14:0,48,544	0/0:21,0:21:60.16:0,60,673	0/0:27,0:27:65.96:0,66,727	0/0:8,0:8:21.06:0,21,238
chr10	15000965	.	CT	C	1195.65	PASS	AB=0.799;AC=25;AF=0.446;AN=56;BaseQRankSum=0.557;DP=545;FS=3.570;HRun=17;HaplotypeScore=75.6967;InbreedingCoeff=-0.1963;MQ=74.47;MQ0=1;MQRankSum=-0.792;QD=2.91;ReadPosRankSum=2.833;VQSLOD=-0.2993;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:18,16:35:61.02:89,0,61	1/1:9,5:14:9.24:62,9,0	0/1:24,2:15:1.68:2,0,62	0/1:20,1:17:9.39:9,0,35	0/0:14,0:17:18.34:0,18,133	0/1:11,1:14:24.54:25,0,25	0/0:13,1:15:9.98:0,10,157	0/1:20,8:28:40.04:100,0,40	0/1:8,5:14:29.31:39,0,29	0/1:12,5:18:39.08:59,0,39	0/1:6,4:10:10.36:10,0,19	0/1:17,6:22:36.47:85,0,36	0/1:12,1:13:17.48:35,0,17	0/1:11,1:12:17.59:18,0,57	0/0:16,1:18:13:0,13,185	0/1:25,5:30:44.46:44,0,209	1/1:17,12:32:23.83:213,24,0	0/0:17,0:19:24.65:0,25,253	0/0:24,2:26:2.97:0,3,181	0/0:18,1:23:19.92:0,20,196	0/0:15,0:15:10.79:0,11,74	0/1:10,9:20:12.06:104,0,12	0/1:9,4:13:22.77:61,0,23	1/1:8,3:12:13.59:72,14,0	0/1:11,2:15:7:57,0,7	0/1:18,2:21:4.46:49,0,4	1/1:12,7:19:18.39:113,18,0	0/1:8,8:18:20.96:119,0,21
chr10	15002513	.	G	GCAGA	25257.79	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-5.382;DP=717;FS=2.641;HRun=0;HaplotypeScore=123.3799;InbreedingCoeff=0.8660;MQ=71.10;MQ0=4;MQRankSum=-5.986;QD=38.27;ReadPosRankSum=4.675;VQSLOD=5.3183;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,17:36:48.16:1167,48,0	1/1:2,11:14:30.10:728,30,0	0/0:29,0:28:47.78:0,48,648	0/0:26,0:27:9.22:0,9,398	1/1:12,20:32:66.18:1546,66,0	1/1:5,17:23:45.15:1097,45,0	1/1:17,29:48:87.30:2109,87,0	1/1:28,8:36:39.58:767,40,0	1/1:8,18:26:51.18:1243,51,0	1/1:14,19:35:63.20:1414,63,0	1/1:8,15:24:39.13:951,39,0	1/1:10,18:29:5.03:1194,5,0	1/1:11,17:27:41.63:1023,42,0	1/1:11,21:31:63.17:1470,63,0	1/1:6,0:13:18.06:315,18,0	1/1:7,0:16:18.06:315,18,0	1/1:9,19:30:48.16:1171,48,0	1/1:14,0:19:16.25:233,16,0	1/1:6,1:12:18.06:319,18,0	1/1:13,0:23:39.13:672,39,0	1/1:20,1:31:9.03:157,9,0	1/1:4,14:18:33.11:805,33,0	1/1:5,11:16:27.09:656,27,0	1/1:10,21:33:63.22:1536,63,0	1/1:6,16:22:45.15:1098,45,0	1/1:4,21:26:69.24:1597,69,0	1/1:8,19:26:45.15:1091,45,0	1/1:0,10:10:24.08:585,24,0
chr10	15002716	.	G	GA	8623.61	PASS	AB=0.584;AC=35;AF=0.625;AN=56;BaseQRankSum=-14.164;DP=596;FS=2.254;HRun=10;HaplotypeScore=71.1100;InbreedingCoeff=0.6265;MQ=70.98;MQ0=6;MQRankSum=-1.222;QD=19.96;ReadPosRankSum=0.979;VQSLOD=5.8277;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,34:39:72.18:768,72,0	1/1:0,4:4:12.03:128,12,0	0/0:33,0:20:26.33:0,26,279	0/0:20,0:10:26.68:0,27,195	1/1:3,18:21:1.80:418,2,0	1/1:2,15:17:36.09:384,36,0	1/1:4,18:22:24.77:541,25,0	1/1:1,29:30:84.21:893,84,0	0/1:6,17:23:4.17:368,0,4	1/1:4,16:22:53.73:524,54,0	1/1:5,21:26:38.46:571,38,0	1/1:7,15:22:30.08:320,30,0	1/1:3,11:14:5.48:261,5,0	1/1:4,17:21:36.09:382,36,0	0/0:2,0:19:33.55:0,34,113	0/0:1,0:15:26.48:0,26,77	0/1:11,22:33:28.02:539,0,28	0/0:2,0:27:42.78:0,43,124	0/0:5,0:17:22.87:0,23,66	0/0:4,0:13:19.29:0,19,72	0/0:1,0:18:28.52:0,29,82	1/1:4,15:19:20.47:421,20,0	1/1:4,12:16:24.52:251,25,0	0/1:6,13:19:43.86:194,0,44	1/1:2,22:24:32.29:531,32,0	1/1:2,20:25:62.83:636,63,0	0/1:4,14:18:10.35:295,0,10	0/1:5,11:16:0.49:200,0,0
chr10	15006691	.	C	CTG	33707.90	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-6.021;DP=727;FS=13.869;HRun=0;HaplotypeScore=137.1005;InbreedingCoeff=0.9965;MQ=81.99;MQ0=0;MQRankSum=-10.683;QD=49.64;ReadPosRankSum=7.239;VQSLOD=4.0830;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,49:54:99:2187,114,0	1/1:0,9:9:23.72:461,24,0	0/0:26,0:26:75.22:0,75,1097	0/0:22,0:22:57.17:0,57,860	1/1:0,23:24:57.20:1101,57,0	1/1:0,22:24:63.22:1213,63,0	1/1:0,26:26:78.27:1491,78,0	1/1:0,20:22:66.20:1221,66,0	1/1:0,22:23:63.22:1214,63,0	1/1:1,28:34:96.20:1728,96,0	1/1:0,14:14:39.09:717,39,0	1/1:0,28:29:78.24:1500,78,0	1/1:1,34:37:99:1961,102,0	1/1:0,36:37:99:1966,102,0	1/1:0,27:28:75.26:1449,75,0	1/1:0,21:22:63.22:1196,63,0	1/1:0,32:32:81.28:1558,81,0	1/1:0,29:29:72.25:1392,72,0	1/1:0,16:17:51.15:946,51,0	1/1:0,23:24:60.21:1160,60,0	1/1:0,57:58:99:2727,141,0	1/1:0,11:11:21.07:405,21,0	1/1:0,18:19:45.15:850,45,0	1/1:0,19:20:39.13:753,39,0	1/1:1,11:13:33.11:618,33,0	1/1:0,35:35:99:2041,105,0	1/1:0,23:24:60.04:1158,60,0	1/1:1,13:14:36.12:695,36,0
chr10	15009630	.	C	CCACCACCACCAT	11488.82	PASS	AB=0.972;AC=53;AF=0.946;AN=56;BaseQRankSum=-3.277;DP=613;FS=8.777;HRun=0;HaplotypeScore=166.0443;InbreedingCoeff=0.3500;MQ=53.41;MQ0=3;MQRankSum=-1.035;QD=19.88;ReadPosRankSum=2.748;VQSLOD=3.4014;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:6,12:25:6.02:295,6,0	1/1:4,0:4:3.01:77,3,0	0/0:35,0:21:17.07:0,17,121	0/1:34,0:20:12.14:12,0,188	1/1:1,6:15:12.47:351,12,0	1/1:7,8:18:6.02:277,6,0	1/1:42,0:42:47.70:885,48,0	1/1:22,0:22:47.89:716,48,0	1/1:8,14:30:9.97:445,10,0	1/1:8,7:23:23.81:488,24,0	1/1:6,3:17:0.47:1,0,0	1/1:11,8:24:12:465,12,0	1/1:6,5:16:6.02:338,6,0	1/1:8,17:32:17.09:786,17,0	1/1:1,16:22:21.07:1191,21,0	1/1:6,19:27:21:1068,21,0	1/1:10,0:10:11.84:78,12,0	1/1:14,0:15:23.94:625,24,0	1/1:14,7:21:25.84:537,26,0	1/1:7,2:14:2.94:18,3,0	1/1:23,20:53:13.16:147,13,0	1/1:2,9:15:6.02:175,6,0	1/1:12,1:12:12.50:325,12,0	1/1:31,1:31:32.22:643,32,0	1/1:4,7:15:6.02:304,6,0	1/1:8,6:16:18.46:588,18,0	1/1:7,7:14:9.29:367,9,0	1/1:4,0:4:6.02:286,6,0
chr10	15009640	.	CATCACCAACACCATCATT	C	1522.17	PASS	AB=0.983;AC=23;AF=0.411;AN=56;BaseQRankSum=2.081;DP=572;FS=1.686;HRun=0;HaplotypeScore=205.2016;InbreedingCoeff=-0.4626;MQ=48.28;MQ0=5;MQRankSum=-1.255;QD=4.00;ReadPosRankSum=6.812;VQSLOD=2.4142;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:23:12.91:13,0,470	1/1:4,0:4:3.01:39,3,0	0/0:36,0:18:39.12:0,39,1404	0/0:36,0:21:48.09:0,48,1403	0/1:17,0:17:78.97:79,0,561	0/1:16,0:16:56.63:57,0,445	0/1:36,0:36:99:133,0,1823	0/1:14,12:26:99:342,0,1140	0/0:28,0:28:15.06:0,15,757	0/1:22,0:22:99:110,0,1177	0/0:17,0:17:15.50:0,16,423	0/1:20,0:21:6.58:7,0,714	0/1:11,0:11:8.40:8,0,141	0/1:26,0:26:99:127,0,225	0/1:22,0:22:24.45:24,0,274	0/1:24,0:24:14.92:15,0,566	0/1:9,0:9:62.95:63,0,131	0/1:16,0:16:63.43:63,0,835	0/1:23,0:20:99:123,0,1081	0/0:13,0:13:12.04:0,12,584	0/0:48,0:47:35:0,35,688	0/1:12,0:12:45.65:46,0,185	0/1:11,0:10:99:109,0,184	0/1:27,0:26:99:214,0,429	0/1:16,0:16:17.02:17,0,212	0/1:17,0:16:68.60:69,0,1152	0/0:10,0:10:2.53:0,3,346	1/1:2,0:2:4.22:24,4,0
chr10	15009652	.	CATCATT	C	935.76	PASS	AB=0.966;AC=20;AF=0.357;AN=56;BaseQRankSum=6.916;DP=516;FS=14.665;HRun=0;HaplotypeScore=129.4177;InbreedingCoeff=-0.3294;MQ=44.32;MQ0=7;MQRankSum=-5.356;QD=3.18;ReadPosRankSum=2.804;VQSLOD=1.2731;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:17,0:16:15.70:16,0,438	1/1:0,4:4:3.01:39,3,0	0/0:37,0:16:45.15:0,45,1193	0/0:41,0:19:54.18:0,54,1270	0/1:15,0:15:39.37:39,0,476	0/1:19,0:19:63.68:64,0,483	0/1:27,7:34:10.58:11,0,1753	0/1:25,2:27:99:155,0,1080	0/0:19,0:19:17.42:0,17,411	0/0:18,0:18:7.57:0,8,959	0/0:15,0:15:14.96:0,15,339	0/0:21,0:21:8.92:0,9,601	0/1:11,0:11:14.91:15,0,220	0/1:21,0:21:99:144,0,220	0/1:17,0:17:53.21:53,0,132	0/1:19,0:19:35.16:35,0,484	0/0:4,4:8:3.01:0,3,95	0/1:9,5:14:66.50:67,0,476	0/1:20,0:16:42.12:42,0,785	0/0:11,0:11:15.05:0,15,372	0/0:45,0:43:38.26:0,38,650	0/1:12,0:12:38.37:38,0,191	0/1:9,0:8:93.98:129,0,94	0/1:24,1:24:59.30:59,0,333	0/1:13,0:13:17:17,0,317	0/1:15,0:14:99:110,0,633	0/0:7,0:7:12.30:0,12,269	1/1:2,0:2:6:65,6,0
chr10	15009859	.	A	AC	7618.85	PASS	AB=1.000;AC=53;AF=0.946;AN=56;BaseQRankSum=2.654;DP=505;FS=7.445;HRun=0;HaplotypeScore=140.7297;InbreedingCoeff=0.7491;MQ=48.25;MQ0=13;MQRankSum=0.103;QD=16.74;ReadPosRankSum=4.191;VQSLOD=6.7554;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,10:17:23.54:194,24,0	1/1:0,10:10:26.96:237,27,0	0/0:50,0:14:24.38:0,24,192	0/1:26,0:11:1.11:1,0,31	1/1:0,21:21:51.71:374,52,0	1/1:11,7:17:31.50:235,31,0	1/1:1,26:28:47.83:428,48,0	1/1:2,11:10:29.85:238,30,0	1/1:1,9:9:12.01:110,12,0	1/1:9,12:21:50.26:414,50,0	1/1:2,9:11:20.20:147,20,0	1/1:6,9:15:38.68:322,39,0	1/1:1,11:12:20.83:201,21,0	1/1:2,15:17:18.71:196,19,0	1/1:2,15:16:41.98:390,42,0	1/1:0,13:13:27.04:260,27,0	1/1:7,5:11:23.58:176,24,0	1/1:8,17:25:64.78:560,65,0	1/1:10,11:19:44.30:350,44,0	1/1:1,10:11:27.86:250,28,0	1/1:4,16:19:47.86:440,48,0	1/1:11,12:23:47.71:366,48,0	1/1:5,10:15:34.27:284,34,0	1/1:7,20:27:59.30:510,59,0	1/1:0,18:18:32.16:231,32,0	1/1:6,11:17:44.76:374,45,0	1/1:2,11:13:30.02:276,30,0	1/1:1,2:3:6:55,6,0
chr10	15011542	.	G	GC	4288.57	PASS	AB=1.000;AC=26;AF=0.464;AN=56;BaseQRankSum=-9.059;DP=439;FS=17.253;HRun=0;HaplotypeScore=85.4328;InbreedingCoeff=0.2462;MQ=73.20;MQ0=0;MQRankSum=-0.545;QD=15.71;ReadPosRankSum=-2.690;VQSLOD=4.9009;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,24:24:60.11:785,60,0	0/1:3,0:3:9.87:12,0,10	0/0:18,0:18:23.39:0,23,376	0/0:11,0:9:18.06:0,18,232	0/0:13,0:13:5.59:0,6,68	0/0:20,0:20:36.87:0,37,130	0/0:28,0:28:0.56:0,1,105	0/1:17,0:17:8.81:59,0,9	0/0:17,0:17:15.34:0,15,113	0/1:17,0:17:37.91:51,0,38	0/0:13,0:13:22.16:0,22,72	1/1:3,16:19:48.84:678,49,0	1/1:0,14:14:33.11:445,33,0	1/1:0,27:27:72.24:959,72,0	0/0:19,0:19:17.90:0,18,91	0/1:18,0:18:28.14:28,0,51	0/1:15,0:15:9.93:10,0,38	0/1:15,0:15:16.96:17,0,37	0/1:11,0:11:16.68:19,0,17	0/0:5,0:5:10.75:0,11,40	0/1:30,0:30:47.30:47,0,80	1/1:1,11:12:28.13:367,28,0	1/1:0,8:8:12.04:163,12,0	1/1:0,9:9:27.09:363,27,0	1/1:2,8:10:18.05:242,18,0	0/1:17,0:17:40.34:40,0,60	0/0:22,0:22:2.12:0,2,84	0/1:7,0:7:2.68:3,0,34
chr10	15013701	.	CGA	C	4843.99	PASS	AB=0.911;AC=23;AF=0.411;AN=56;BaseQRankSum=1.843;DP=1128;FS=2.512;HRun=0;HaplotypeScore=435.5916;InbreedingCoeff=-0.6790;MQ=48.19;MQ0=11;MQRankSum=-11.220;QD=5.44;ReadPosRankSum=-9.916;VQSLOD=1.4841;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:57,3:60:89.45:0,89,1053	0/1:4,3:7:54.84:122,0,55	0/0:55,1:25:68.12:0,68,1180	0/1:61,3:25:25.60:26,0,786	0/0:20,0:20:33.77:0,34,285	0/1:25,1:26:99:225,0,366	0/1:45,0:45:99:115,0,797	0/1:39,0:38:99:331,0,813	0/1:40,10:51:99:615,0,683	0/1:42,7:49:99:309,0,893	0/1:11,3:14:85.92:86,0,123	0/1:58,9:67:99:601,0,1084	0/1:48,8:56:99:257,0,970	0/1:46,5:53:99:382,0,869	0/1:43,0:43:5.36:5,0,551	0/1:34,0:34:3.78:4,0,690	0/1:31,1:32:99:167,0,581	0/1:34,0:33:8.73:9,0,482	0/0:22,0:22:34.49:0,34,681	0/1:32,0:32:99:189,0,382	0/1:66,6:71:99:409,0,695	0/1:31,4:35:99:263,0,505	0/1:18,3:21:53.53:54,0,255	0/0:74,2:76:3.92:0,4,1364	0/1:19,4:23:99:110,0,338	0/1:42,9:51:99:377,0,1099	0/1:29,0:29:61.84:62,0,539	0/1:8,2:10:99:128,0,158
chr10	15013703	.	A	AACAC	40552.58	PASS	AB=1.000;AC=53;AF=0.946;AN=56;BaseQRankSum=-0.971;DP=1173;FS=11.810;HRun=0;HaplotypeScore=370.6072;InbreedingCoeff=0.6142;MQ=47.86;MQ0=14;MQRankSum=3.892;QD=36.53;ReadPosRankSum=4.611;VQSLOD=4.2796;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:20,42:63:99:2665,101,0	1/1:5,2:7:15.05:342,15,0	0/0:63,0:24:56.81:0,57,901	0/1:71,0:24:31.20:31,0,693	1/1:4,19:24:10.86:280,11,0	1/1:4,22:27:45.10:994,45,0	1/1:19,29:51:26.94:695,27,0	1/1:17,27:43:66.22:1523,66,0	1/1:25,26:51:99:2435,116,0	1/1:24,22:47:99:2492,111,0	1/1:6,8:14:16.23:387,16,0	1/1:24,43:67:99:3666,157,0	1/1:20,35:55:99:3179,135,0	1/1:27,25:54:99:2713,120,0	1/1:6,40:48:34.43:928,34,0	1/1:7,29:37:48.16:1238,48,0	1/1:9,23:32:78.74:1937,79,0	1/1:9,28:36:54.64:1313,55,0	1/1:8,15:23:45.15:1027,45,0	1/1:9,24:34:27.09:650,27,0	1/1:40,29:75:76.73:1512,77,0	1/1:16,20:36:74.46:1603,74,0	1/1:11,10:21:19.56:414,20,0	1/1:25,51:78:99:3341,143,0	1/1:12,12:23:30.08:661,30,0	1/1:30,21:51:99:2642,118,0	1/1:5,21:27:51.15:1226,51,0	1/1:5,5:10:30.08:660,30,0
chr10	15013767	.	AAT	A	6723.35	PASS	AB=0.962;AC=31;AF=0.554;AN=56;BaseQRankSum=15.878;DP=1257;FS=0.732;HRun=0;HaplotypeScore=357.5997;InbreedingCoeff=0.6017;MQ=53.65;MQ0=7;MQRankSum=2.234;QD=8.89;ReadPosRankSum=7.360;VQSLOD=2.9459;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:63,7:69:64.16:618,64,0	1/1:14,0:14:34.50:185,34,0	0/0:53,0:35:64.78:0,65,1379	0/0:38,1:17:42.10:0,42,720	0/0:24,0:24:57.17:0,57,1066	0/0:18,0:18:42.04:0,42,772	0/0:44,0:45:64.79:0,65,1650	0/1:35,0:35:99:181,0,179	1/1:57,1:58:95.13:621,95,0	1/1:56,1:57:5.35:463,5,0	1/1:15,0:15:6.42:115,6,0	1/1:72,0:72:97.19:811,97,0	0/1:63,3:66:11.38:580,0,11	1/1:55,0:55:25.47:479,25,0	0/0:70,0:70:99:0,184,3393	0/0:46,0:45:99:0,120,2144	1/1:35,3:38:3.95:421,4,0	0/1:31,1:33:8.38:8,0,927	0/0:35,0:35:99:0,102,1662	0/0:27,0:27:51.16:0,51,951	0/0:136,7:142:99:0,256,5322	1/1:39,0:39:28.18:355,28,0	1/1:25,0:25:38.09:284,38,0	0/1:65,7:72:73.94:474,0,74	1/1:26,0:25:54.02:268,54,0	1/1:51,1:52:59.68:556,60,0	1/1:15,0:15:13.93:183,14,0	0/1:14,0:14:22.01:121,0,22
chr10	15013769	.	TAC	T	19752.42	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=13.330;DP=1261;FS=1.395;HRun=0;HaplotypeScore=312.6276;InbreedingCoeff=0.9974;MQ=54.05;MQ0=6;MQRankSum=0.026;QD=27.51;ReadPosRankSum=3.330;VQSLOD=4.9059;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,58:68:99:1678,131,0	1/1:1,13:14:36.12:467,36,0	0/0:53,0:35:75.91:0,76,1147	0/0:41,0:18:42.11:0,42,655	0/0:25,0:25:57.16:0,57,940	0/0:18,0:18:39.04:0,39,654	0/0:46,0:46:70.60:0,71,1454	1/1:16,18:34:69.22:884,69,0	1/1:6,52:58:99:1544,122,0	1/1:9,48:57:99:1761,138,0	1/1:3,12:15:30.10:389,30,0	1/1:4,66:71:99:2027,157,0	1/1:11,53:64:99:1773,138,0	1/1:6,48:54:99:1443,111,0	0/0:71,0:71:99:0,175,2931	0/0:46,0:45:85.48:0,85,1763	1/1:11,27:38:82.51:1065,83,0	0/0:34,0:34:14.77:0,15,750	0/0:37,0:36:75.26:0,75,1271	0/0:26,0:26:48.16:0,48,816	0/0:145,0:144:99:0,250,4547	1/1:7,32:39:84.27:1092,84,0	1/1:2,23:25:63.20:819,63,0	1/1:20,53:73:99:1472,115,0	1/1:0,27:27:57.19:741,57,0	1/1:5,46:51:99:1739,135,0	1/1:3,12:15:36.12:467,36,0	1/1:2,12:14:30.10:390,30,0
chr10	15013969	.	GCA	G	27439.23	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-2.500;DP=1131;FS=3.139;HRun=0;HaplotypeScore=250.3226;InbreedingCoeff=0.9821;MQ=54.28;MQ0=15;MQRankSum=1.130;QD=26.77;ReadPosRankSum=4.892;VQSLOD=5.5286;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,30:41:91.99:1105,92,0	1/1:1,4:5:12.03:140,12,0	0/0:44,0:14:26.83:0,27,403	0/0:61,1:22:23.27:0,23,419	1/1:5,19:23:45.10:561,45,0	1/1:4,16:20:39.09:484,39,0	1/1:9,39:49:84.57:1056,85,0	1/1:12,31:43:96.22:1184,96,0	1/1:9,32:42:87.27:1106,87,0	1/1:12,32:44:99:1300,102,0	1/1:2,12:14:30.04:354,30,0	1/1:11,51:62:99:1778,141,0	1/1:13,47:60:99:1761,138,0	1/1:9,45:54:99:1312,105,0	1/1:6,49:55:99:1620,129,0	1/1:4,46:50:99:1641,129,0	1/1:10,22:32:72.19:905,72,0	1/1:3,37:40:96.31:1227,96,0	1/1:8,19:27:56.82:624,57,0	1/1:3,23:26:54.10:659,54,0	1/1:21,115:136:99:3415,268,0	1/1:5,18:23:42.09:521,42,0	1/1:3,14:17:36.12:462,36,0	1/1:15,38:53:99:1333,111,0	1/1:4,26:30:42.14:540,42,0	1/1:12,30:42:99:1219,99,0	1/1:4,17:20:51.11:633,51,0	1/1:1,14:15:40.94:500,41,0
chr10	15014005	.	GCACA	G	13009.02	PASS	AB=0.714;AC=33;AF=0.589;AN=56;BaseQRankSum=3.582;DP=1048;FS=3.819;HRun=0;HaplotypeScore=308.8176;InbreedingCoeff=0.9410;MQ=52.04;MQ0=14;MQRankSum=-6.509;QD=24.59;ReadPosRankSum=0.304;VQSLOD=4.2782;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,37:48:60.98:927,61,0	1/1:2,7:9:12.04:212,12,0	0/0:53,0:25:49.95:0,50,936	0/0:69,0:20:48.06:0,48,893	0/0:27,0:26:51.16:0,51,1194	0/0:20,0:20:45.14:0,45,1002	0/0:44,0:45:99:0,99,2263	1/1:20,20:40:51.65:1149,52,0	1/1:12,20:32:36.12:620,36,0	1/1:11,27:38:77.90:1159,78,0	1/1:3,12:15:27.09:443,27,0	1/1:13,38:51:66.17:1015,66,0	1/1:13,36:49:74.45:1291,74,0	1/1:12,39:51:74.96:1213,75,0	0/0:47,0:48:99:0,117,2578	0/0:38,0:39:98.49:0,98,2200	1/1:11,13:24:32.02:542,32,0	0/0:31,0:31:87.28:0,87,2088	0/0:23,0:23:63.15:0,63,1316	0/0:28,0:28:57.18:0,57,1231	0/0:133,0:134:99:0,288,6426	1/1:7,12:19:23.11:371,23,0	1/1:3,20:23:21.07:370,21,0	1/1:18,16:34:29.89:512,30,0	1/1:14,13:27:48.10:769,48,0	1/1:6,33:39:99:1661,102,0	1/1:10,10:20:36.07:593,36,0	0/1:6,4:10:4.13:161,0,4
chr10	15014475	.	G	GGT	11367.55	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-18.180;DP=673;FS=6.968;HRun=0;HaplotypeScore=76.4646;InbreedingCoeff=0.9972;MQ=79.94;MQ0=2;MQRankSum=-1.596;QD=49.42;ReadPosRankSum=-0.136;VQSLOD=5.5927;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,120,1745	0/0:6,0:6:15.05:0,15,221	0/0:18,0:18:51.17:0,51,736	0/0:15,0:15:35.24:0,35,466	1/1:2,25:28:75.26:1375,75,0	1/1:0,20:20:51.17:955,51,0	1/1:0,23:23:63.22:1180,63,0	0/0:28,0:28:75.24:0,75,1087	0/0:15,0:15:45.15:0,45,663	0/0:28,0:28:81.27:0,81,1191	0/0:20,0:20:60.20:0,60,881	0/0:20,0:20:60.19:0,60,864	0/0:25,0:25:75.25:0,75,1098	0/0:32,0:32:96.30:0,96,1375	1/1:2,27:29:75.26:1405,75,0	1/1:1,24:25:25.05:1192,25,0	0/0:38,0:38:99:0,111,1615	1/1:1,23:25:69.24:1284,69,0	1/1:2,29:31:93.32:1729,93,0	1/1:0,18:17:45.15:843,45,0	1/1:1,30:30:75.26:1405,75,0	0/0:19,0:19:54.18:0,54,794	0/0:23,0:23:69.23:0,69,1013	0/0:24,0:24:69.19:0,69,974	0/0:23,0:23:63.21:0,63,927	0/0:23,0:23:63.21:0,63,928	0/0:29,0:29:84.28:0,84,1237	0/0:15,0:15:36.59:0,37,531
chr10	15014802	.	AC	A	3778.02	PASS	AB=1.000;AC=37;AF=0.661;AN=56;BaseQRankSum=-2.842;DP=457;FS=37.271;HRun=11;HaplotypeScore=60.3672;InbreedingCoeff=0.7686;MQ=79.49;MQ0=0;MQRankSum=-2.172;QD=11.62;ReadPosRankSum=6.071;VQSLOD=0.4028;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:25.08:0,25,206	1/1:8,2:10:8.97:73,9,0	0/1:13,0:12:33.02:33,0,54	0/0:23,2:24:2.49:0,2,168	1/1:8,2:11:19.99:152,20,0	1/1:20,4:28:45.07:297,45,0	1/1:10,11:23:28:205,28,0	1/1:13,10:25:24.97:184,25,0	1/1:11,6:19:25:181,25,0	1/1:8,5:15:10.97:80,11,0	1/1:3,5:8:17.96:147,18,0	0/0:16,0:16:14.47:0,14,88	0/0:12,0:12:20.85:0,21,169	0/0:6,0:19:11.78:0,12,83	1/1:18,4:22:35.74:279,36,0	1/1:5,3:8:5.95:49,6,0	1/1:11,18:29:53.89:441,54,0	1/1:12,13:28:61.84:466,62,0	1/1:11,5:16:28.12:225,28,0	1/1:4,4:8:20.96:171,21,0	1/1:10,16:26:22.27:364,22,0	0/0:7,0:7:10.25:0,10,85	0/0:8,0:8:6.15:0,6,30	0/0:8,0:21:2.63:0,3,14	0/0:7,0:7:10.16:0,10,70	1/1:10,6:18:24.98:180,25,0	1/1:10,3:15:30.92:221,31,0	1/1:0,2:3:5.03:30,5,0
chr10	15019115	.	C	CAAAAAAA	9931.92	PASS	AB=1.000;AC=53;AF=0.946;AN=56;BaseQRankSum=-2.848;DP=574;FS=1.722;HRun=12;HaplotypeScore=136.6487;InbreedingCoeff=0.4828;MQ=43.85;MQ0=17;MQRankSum=-3.575;QD=17.49;ReadPosRankSum=0.014;VQSLOD=1.9313;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:21:42.90:285,43,0	1/1:9,0:8:14.89:123,15,0	0/0:5,0:3:8.06:0,8,112	0/1:10,0:6:3.72:4,0,31	1/1:26,2:27:62.81:862,63,0	1/1:5,1:17:6.88:123,7,0	1/1:26,2:27:56.60:742,57,0	1/1:43,0:37:71.35:850,71,0	1/1:9,0:9:17.92:201,18,0	1/1:37,1:35:63.27:847,63,0	1/1:22,0:19:50.53:372,51,0	1/1:19,0:17:26.65:218,27,0	1/1:17,0:16:23.75:181,24,0	1/1:11,0:9:12.54:110,13,0	1/1:6,13:20:6.96:149,7,0	1/1:3,2:14:21.54:523,22,0	1/1:31,0:28:52.84:505,53,0	1/1:5,8:13:6.02:153,6,0	1/1:6,4:12:27.01:605,27,0	1/1:10,16:29:30.10:679,30,0	1/1:9,7:17:8.86:203,9,0	1/1:11,0:10:10.25:114,10,0	1/1:13,0:12:10.31:70,10,0	1/1:21,0:18:26.73:200,27,0	1/1:6,0:24:3.01:102,3,0	1/1:36,0:35:83.86:1060,84,0	1/1:15,0:14:32.88:338,33,0	1/1:25,0:23:35.79:312,36,0
chr10	15019667	.	TG	T	17857.20	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-6.045;DP=768;FS=15.580;HRun=8;HaplotypeScore=78.1271;InbreedingCoeff=0.9774;MQ=74.78;MQ0=1;MQRankSum=-6.360;QD=24.13;ReadPosRankSum=4.237;VQSLOD=4.0186;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,38:45:99:1043,108,0	1/1:1,10:11:26.99:261,27,0	0/0:18,0:18:42.05:0,42,444	0/0:10,0:10:20.95:0,21,200	1/1:3,26:29:78.12:752,78,0	1/1:2,18:20:54.09:521,54,0	1/1:4,32:36:72.11:695,72,0	1/1:5,19:24:54.07:521,54,0	1/1:2,27:29:81.12:782,81,0	1/1:7,19:26:60.08:577,60,0	1/1:3,13:16:36.06:348,36,0	1/1:6,36:42:99:1043,108,0	1/1:5,35:40:99:956,99,0	1/1:5,26:31:69.11:666,69,0	1/1:2,22:24:54.08:522,54,0	1/1:2,30:32:84.13:811,84,0	1/1:4,23:27:66.10:637,66,0	1/1:0,29:29:75.12:724,75,0	1/1:1,23:24:69.11:666,69,0	1/1:2,15:17:45.07:434,45,0	1/1:7,81:87:99:2202,228,0	1/1:2,19:21:54.56:522,55,0	1/1:2,11:13:33.05:317,33,0	1/1:2,44:46:99:1159,120,0	1/1:2,6:8:18.03:174,18,0	1/1:5,29:34:87.11:829,87,0	1/1:3,21:24:60.09:579,60,0	1/1:0,4:4:12.02:116,12,0
chr10	15020291	.	G	GC	4875.94	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-10.434;DP=628;FS=10.412;HRun=7;HaplotypeScore=65.7811;InbreedingCoeff=0.9971;MQ=82.47;MQ0=1;MQRankSum=-1.788;QD=26.64;ReadPosRankSum=3.826;VQSLOD=5.1656;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,28:39:81.11:957,81,0	0/0:7,0:7:18:0,18,166	0/0:21,0:21:60.05:0,60,560	0/0:21,0:21:33.43:0,33,424	0/0:21,0:22:59.11:0,59,550	0/0:31,0:31:87.09:0,87,822	0/0:29,0:29:81.12:0,81,777	0/0:26,0:26:54.03:0,54,506	0/0:13,0:13:33.05:0,33,319	0/0:29,0:29:66.09:0,66,637	0/0:15,0:15:42.02:0,42,391	1/1:1,26:27:66.20:797,66,0	1/1:4,24:28:60.18:719,60,0	1/1:1,22:23:60.18:725,60,0	0/0:22,0:22:63.10:0,63,608	0/0:17,0:16:45.06:0,45,429	0/0:29,0:29:81.08:0,81,768	0/0:21,0:21:50.97:0,51,467	0/0:27,0:27:75.10:0,75,713	0/0:20,0:20:48.06:0,48,458	0/0:33,0:32:84.09:0,84,800	1/1:2,10:12:33.03:375,33,0	1/1:1,10:11:20.88:253,21,0	1/1:5,22:27:54.17:652,54,0	1/1:3,13:16:33.10:399,33,0	0/0:32,0:32:87.13:0,87,840	0/0:22,0:22:60.09:0,60,578	0/0:8,0:8:21.03:0,21,203
chr10	15020594	.	G	GAGACAC	4024.12	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=1.844;DP=795;FS=1.866;HRun=0;HaplotypeScore=223.9185;InbreedingCoeff=0.9614;MQ=51.05;MQ0=55;MQRankSum=-1.194;QD=14.90;ReadPosRankSum=-1.617;VQSLOD=2.9029;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:44:71.82:0,72,1200	0/0:10,0:10:18.06:0,18,382	0/0:37,0:11:10.92:0,11,103	0/0:43,0:9:13.36:0,13,97	1/1:4,14:19:4.05:172,4,0	1/1:2,15:18:20.43:504,20,0	1/1:8,22:37:24.08:729,24,0	0/0:39,0:22:29.89:0,30,384	0/0:29,0:29:57.15:0,57,1143	0/0:32,0:28:56.36:0,56,915	0/0:18,0:18:41.59:0,42,717	0/0:34,0:34:83.38:0,83,1284	0/0:29,0:29:69.03:0,69,1224	0/0:26,0:25:49.33:0,49,921	1/1:28,0:28:35.46:337,35,0	1/1:33,0:33:55:497,55,0	0/0:27,0:27:62.96:0,63,1054	1/1:24,0:24:45.02:358,45,0	1/1:27,0:15:36.02:580,36,0	1/1:21,0:19:22.24:210,22,0	1/1:61,0:59:66.67:636,67,0	0/0:15,0:15:35.89:0,36,548	0/0:18,0:18:41.91:0,42,647	0/0:44,0:44:79.29:0,79,1474	0/0:17,0:17:29.95:0,30,504	0/0:30,0:29:68.99:0,69,1302	0/0:24,0:24:57.10:0,57,1045	0/0:6,0:6:15.02:0,15,241
chr10	15020608	.	G	GAC	5119.20	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=-3.533;DP=774;FS=7.076;HRun=0;HaplotypeScore=184.2040;InbreedingCoeff=0.7228;MQ=57.28;MQ0=47;MQRankSum=-1.098;QD=20.08;ReadPosRankSum=2.159;VQSLOD=4.3615;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:44:72.23:0,72,961	0/0:11,0:11:27.09:0,27,386	0/0:35,0:12:30.57:0,31,427	0/0:39,0:12:15.48:0,15,285	0/1:18,0:17:23.34:23,0,75	0/1:18,0:18:64.40:84,0,64	0/1:38,0:37:99:104,0,159	0/0:50,0:34:84.27:0,84,1139	0/0:30,0:30:57.19:0,57,807	0/0:30,0:28:70.03:0,70,1038	0/0:16,0:16:42.14:0,42,580	0/0:30,0:30:85.42:0,85,1098	0/0:26,0:26:69.09:0,69,918	0/0:26,0:26:70.48:0,70,978	1/1:3,22:25:38.62:762,39,0	1/1:3,26:29:58.40:1090,58,0	0/0:24,0:24:69.21:0,69,943	1/1:4,16:20:42.60:739,43,0	1/1:13,15:17:33.54:549,34,0	1/1:5,13:16:22.16:436,22,0	1/1:8,52:61:75.24:1331,75,0	0/0:15,0:15:39.12:0,39,522	0/0:21,0:21:48.13:0,48,647	0/0:40,0:40:78.21:0,78,1060	0/0:13,0:13:30.10:0,30,407	0/0:36,0:35:90.29:0,90,1256	0/0:25,0:25:75.25:0,75,1062	0/0:6,0:6:18.06:0,18,258
chr10	15020668	.	CGGATGGACAG	C	57.24	PASS	AB=0.913;AC=3;AF=0.054;AN=56;BaseQRankSum=-2.758;DP=634;FS=2.817;HRun=0;HaplotypeScore=222.2167;InbreedingCoeff=-0.0628;MQ=55.93;MQ0=11;MQRankSum=-4.049;QD=0.72;ReadPosRankSum=-3.449;VQSLOD=2.3674;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:35,1:36:99:119,0,319	0/0:4,0:4:12.04:0,12,520	0/0:32,0:14:37.66:0,38,977	0/0:38,0:18:49.90:0,50,1388	0/0:9,0:9:15:0,15,369	0/0:15,0:15:28.30:0,28,1051	0/0:26,0:26:63.03:0,63,2227	0/0:35,0:34:35.08:0,35,2334	0/0:25,0:25:21.05:0,21,579	0/0:25,0:25:54.14:0,54,2808	0/0:10,0:10:27.09:0,27,1132	0/1:18,8:26:18.28:18,0,1627	0/1:18,0:18:18.77:19,0,449	0/0:17,0:17:51.09:0,51,2044	0/0:25,0:25:69.01:0,69,2065	0/0:28,0:28:58.84:0,59,1973	0/0:30,0:30:90.10:0,90,3182	0/0:15,0:15:44.51:0,45,1333	0/0:22,0:21:47.34:0,47,1755	0/0:9,0:9:21.07:0,21,873	0/0:55,0:54:99:0,111,4056	0/0:7,5:12:20.99:0,21,838	0/0:11,4:15:28.23:0,28,979	0/0:36,0:37:19.32:0,19,686	0/0:17,0:17:5.98:0,6,66	0/0:18,0:18:32.22:0,32,1786	0/0:22,0:21:52.44:0,52,2227	0/0:13,0:12:26.60:0,27,1333
chr10	15020673	.	G	GGACA	3874.18	PASS	AB=1.000;AC=30;AF=0.556;AN=54;BaseQRankSum=-0.863;DP=621;FS=3.306;HRun=0;HaplotypeScore=152.5345;InbreedingCoeff=0.7339;MQ=54.68;MQ0=17;MQRankSum=2.654;QD=11.13;ReadPosRankSum=2.060;VQSLOD=2.9220;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:37,0:36:6.49:112,6,0	1/1:5,0:5:11.73:87,12,0	0/0:29,0:11:20.50:0,20,162	0/0:34,0:15:16.30:0,16,162	0/0:6,0:6:2.99:0,3,24	0/0:15,0:15:25.49:0,25,193	0/0:25,0:24:44.69:0,45,348	1/1:30,0:29:65.88:558,66,0	0/1:25,0:24:14.81:20,0,15	1/1:25,0:25:25.76:454,26,0	0/1:11,0:11:58.37:120,0,58	1/1:27,0:27:35.49:279,35,0	1/1:19,0:19:3.27:70,3,0	1/1:19,0:17:38.94:321,39,0	0/0:23,0:23:47.90:0,48,407	0/0:28,0:28:40.03:0,40,330	1/1:33,0:33:65.92:546,66,0	0/0:15,0:15:35.11:0,35,253	0/0:23,0:22:53.69:0,54,422	0/0:9,0:9:17.95:0,18,143	0/0:54,0:52:86.72:0,87,684	1/1:15,0:15:14.95:125,15,0	1/1:15,0:14:17.95:167,18,0	1/1:9,27:36:6.02:126,6,0	./.	1/1:15,0:15:38.62:335,39,0	1/1:22,0:21:1.59:308,2,0	1/1:14,0:13:30.42:246,30,0
chr10	15020678	.	G	GACAGAC	3812.38	PASS	AB=1.000;AC=28;AF=0.500;AN=56;BaseQRankSum=-0.327;DP=648;FS=1.356;HRun=0;HaplotypeScore=171.2348;InbreedingCoeff=0.5088;MQ=53.17;MQ0=23;MQRankSum=1.050;QD=9.44;ReadPosRankSum=0.845;VQSLOD=2.7955;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:46,0:44:14.63:199,15,0	1/1:4,0:4:8.99:75,9,0	0/0:26,0:8:20.28:0,20,161	0/0:28,0:11:16.30:0,16,162	0/0:4,0:4:2.99:0,3,24	0/0:14,0:15:26.91:0,27,211	0/0:22,0:22:44.69:0,45,348	1/1:30,0:28:63.08:554,63,0	0/1:25,0:24:3.17:3,0,49	0/1:27,0:26:1.78:429,0,2	0/1:14,0:13:88.19:120,0,88	1/1:30,0:30:35.03:249,35,0	1/1:4,13:21:2.92:69,3,0	1/1:25,0:22:39.41:322,39,0	0/0:18,0:22:47.82:0,48,413	0/0:21,0:26:40.37:0,40,308	0/1:33,0:36:45.52:465,0,46	0/0:14,0:15:23.58:0,24,257	0/0:19,0:21:38.43:0,38,342	0/0:9,0:8:17.95:0,18,143	0/0:54,0:52:86.72:0,87,684	1/1:16,0:16:14.98:125,15,0	0/1:17,0:16:10.43:114,0,10	1/1:35,0:36:12.85:182,13,0	1/1:16,0:16:2.98:21,3,0	1/1:19,0:19:42.73:371,43,0	0/1:26,0:25:99:302,0,136	1/1:15,0:14:1.88:212,2,0
chr10	15020680	.	C	CAG	3645.86	PASS	AB=0.881;AC=25;AF=0.446;AN=56;BaseQRankSum=1.621;DP=653;FS=11.760;HRun=0;HaplotypeScore=130.2290;InbreedingCoeff=0.4102;MQ=52.11;MQ0=26;MQRankSum=1.080;QD=9.16;ReadPosRankSum=2.379;VQSLOD=2.9772;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:16,29:44:26.57:67,0,27	1/1:4,0:4:8.99:75,9,0	0/0:23,0:7:18.46:0,18,157	0/0:27,0:10:16.17:0,16,162	0/0:4,0:4:2.99:0,3,24	0/0:15,0:15:26.84:0,27,206	0/0:22,0:21:44.69:0,45,348	1/1:30,0:28:67.13:562,67,0	0/1:6,20:24:7.90:50,0,8	1/1:29,0:27:51.37:485,51,0	0/1:15,0:14:34.06:121,0,34	1/1:30,0:30:8.06:209,8,0	0/1:20,0:20:17.40:45,0,17	1/1:27,0:24:0.55:276,1,0	0/0:22,0:22:34.69:0,35,352	0/0:25,0:25:15:0,15,264	1/1:38,0:38:42.61:535,43,0	0/0:16,0:16:37.38:0,37,250	0/0:21,0:20:47.70:0,48,373	0/0:9,0:8:17.95:0,18,143	0/0:54,0:51:86.72:0,87,684	1/1:16,0:16:14.76:124,15,0	0/1:17,0:16:21.39:103,0,21	0/1:37,0:37:11.01:65,0,11	0/0:5,12:17:0.89:0,1,2	1/1:21,0:21:40.30:367,40,0	0/1:27,0:25:10.77:334,0,11	1/1:15,0:14:16.55:227,17,0
chr10	15020834	.	G	GGC	9562.68	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-11.927;DP=709;FS=0.319;HRun=0;HaplotypeScore=86.4298;InbreedingCoeff=0.9996;MQ=78.33;MQ0=0;MQRankSum=-1.890;QD=49.55;ReadPosRankSum=4.866;VQSLOD=5.8936;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,25:27:69.24:1289,69,0	0/0:8,0:8:24.08:0,24,353	0/0:16,0:16:39.13:0,39,555	0/0:20,0:20:51.96:0,52,663	0/0:15,0:15:45.12:0,45,605	0/0:19,0:19:57.18:0,57,820	0/0:37,0:37:99:0,111,1615	0/0:19,0:19:51.17:0,51,750	0/0:38,0:38:99:0,108,1532	0/0:28,0:28:75.25:0,75,1105	0/0:17,0:17:48.16:0,48,704	1/1:1,29:31:84.29:1553,84,0	1/1:2,26:29:72.05:1342,72,0	1/1:0,18:19:57.20:1058,57,0	0/0:28,0:28:81.27:0,81,1193	0/0:32,0:32:96.32:0,96,1413	0/0:40,0:40:99:0,114,1679	0/0:23,0:23:69.16:0,69,953	0/0:18,0:18:51.17:0,51,751	0/0:29,0:29:84.28:0,84,1237	0/0:63,0:63:99:0,187,2682	1/1:1,17:18:51.17:954,51,0	1/1:0,12:12:33.11:617,33,0	1/1:1,37:37:90.31:1684,90,0	1/1:0,19:19:57.20:1066,57,0	0/0:26,0:26:78.22:0,78,1106	0/0:29,0:29:87.27:0,87,1244	0/0:11,0:11:33.11:0,33,485
chr10	15022833	.	A	AC	6057.92	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-12.387;DP=593;FS=4.175;HRun=2;HaplotypeScore=61.4005;InbreedingCoeff=0.9947;MQ=81.43;MQ0=0;MQRankSum=-1.540;QD=36.27;ReadPosRankSum=0.468;VQSLOD=5.3393;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:90.27:0,90,1101	1/1:0,6:6:18.06:259,18,0	0/0:12,0:12:36.07:0,36,406	0/0:20,0:20:45.12:0,45,526	0/0:6,0:6:18.02:0,18,195	0/0:17,0:17:39.10:0,39,453	0/0:31,0:31:93.26:0,93,1135	1/1:2,19:22:57.04:700,57,0	1/1:2,20:22:54.18:777,54,0	1/1:0,13:13:39.04:516,39,0	1/1:1,6:7:15.02:213,15,0	0/0:17,0:17:51.16:0,51,630	0/0:27,0:27:81.24:0,81,991	0/0:21,0:21:63.19:0,63,767	0/0:13,0:13:36.09:0,36,423	0/0:17,0:17:45.14:0,45,552	1/1:1,39:40:99:1527,108,0	0/0:39,0:39:99:0,105,1300	0/0:19,0:19:54.16:0,54,654	0/0:14,0:14:33.09:0,33,396	0/0:63,0:63:99:0,177,2106	0/0:16,0:16:39.09:0,39,470	0/0:11,0:11:30.04:0,30,349	0/0:35,0:35:99:0,102,1235	0/0:13,0:13:35.87:0,36,388	1/1:1,17:18:51.08:685,51,0	1/1:1,20:21:57.19:820,57,0	1/1:1,17:18:39.13:560,39,0
chr10	15023042	.	C	CTGGT	9949.57	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=10.893;DP=664;FS=0.737;HRun=0;HaplotypeScore=115.7114;InbreedingCoeff=0.9991;MQ=87.15;MQ0=0;MQRankSum=-6.728;QD=58.18;ReadPosRankSum=0.524;VQSLOD=6.4901;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,111,1960	0/0:8,0:8:24.08:0,24,426	0/0:23,0:23:60.16:0,60,1058	0/0:27,0:27:49.40:0,49,965	0/0:14,0:14:36.12:0,36,660	0/0:17,0:17:48.16:0,48,883	0/0:32,0:32:93.28:0,93,1627	0/0:23,0:23:66.23:0,66,1204	0/0:25,0:25:72.25:0,72,1325	0/0:15,0:15:39.13:0,39,716	0/0:12,0:12:30.10:0,30,552	0/0:39,0:39:99:0,117,2111	0/0:23,0:23:66.23:0,66,1204	0/0:31,0:31:90.31:0,90,1655	1/1:5,25:30:84.29:2172,84,0	1/1:5,18:23:57.20:1483,57,0	0/0:25,0:25:75.24:0,75,1339	1/1:7,20:27:63.22:1627,63,0	1/1:12,6:19:29.63:584,30,0	1/1:2,7:10:27.02:595,27,0	1/1:4,58:62:99:3488,135,0	0/0:17,0:17:48.15:0,48,853	0/0:13,0:13:33.11:0,33,607	0/0:27,0:27:75.23:0,75,1313	0/0:22,0:22:63.14:0,63,1129	0/0:24,0:24:66.23:0,66,1210	0/0:23,0:23:69.24:0,69,1256	0/0:13,0:13:39.13:0,39,710
chr10	15024502	.	G	GA	195.72	PASS	AB=0.767;AC=6;AF=0.107;AN=56;BaseQRankSum=1.104;DP=298;FS=1.147;HRun=10;HaplotypeScore=38.6213;InbreedingCoeff=0.4620;MQ=64.81;MQ0=3;MQRankSum=-2.211;QD=4.89;ReadPosRankSum=-0.240;VQSLOD=-0.2060;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:27:52.57:0,53,424	0/0:5,0:5:14.98:0,15,123	0/0:15,0:8:17.94:0,18,141	0/0:12,0:7:5.97:0,6,48	0/1:3,2:6:12.30:43,0,12	1/1:2,9:10:17.88:174,18,0	1/1:3,5:9:11.82:98,12,0	0/0:19,0:15:31.97:0,32,252	0/0:7,0:7:17.97:0,18,146	0/0:3,0:4:5.02:0,5,31	0/0:5,0:5:8.99:0,9,74	0/0:6,0:6:11.98:0,12,98	0/0:5,0:5:14.98:0,15,123	0/0:7,0:7:14.95:0,15,123	0/0:7,0:7:11.98:0,12,98	0/0:9,0:9:23.96:0,24,197	0/0:25,0:24:47.94:0,48,394	0/0:23,0:23:53.92:0,54,443	0/0:15,0:15:32.92:0,33,268	0/0:4,0:4:8.98:0,9,74	0/1:11,2:13:8.05:8,0,148	0/0:1,0:1:3:0,3,25	0/0:2,0:3:8.03:0,8,55	0/0:21,0:21:56.93:0,57,468	0/0:3,0:3:8.03:0,8,55	0/0:11,0:11:20.94:0,21,172	0/0:12,0:11:16.52:0,17,166	0/0:11,0:11:14.93:0,15,123
chr10	15024591	.	G	GC	8435.55	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-10.225;DP=484;FS=11.014;HRun=6;HaplotypeScore=47.1855;InbreedingCoeff=0.9609;MQ=73.50;MQ0=0;MQRankSum=0.064;QD=30.02;ReadPosRankSum=0.857;VQSLOD=4.7345;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,34:36:75.24:944,75,0	1/1:2,7:9:21.07:264,21,0	0/0:7,0:8:20.05:0,20,176	0/0:8,0:8:9.35:0,9,143	0/0:5,0:5:12.03:0,12,122	0/0:17,0:17:39.06:0,39,387	0/0:32,0:32:93.20:0,93,941	1/1:2,10:12:21.05:248,21,0	1/1:0,17:17:51.16:639,51,0	1/1:0,13:13:39.10:474,39,0	1/1:1,2:3:6.02:75,6,0	1/1:1,18:19:45.11:549,45,0	1/1:3,10:13:36.07:431,36,0	1/1:0,19:19:57.18:716,57,0	0/0:13,0:13:39.09:0,39,397	0/0:13,0:13:39.08:0,39,391	1/1:3,35:38:84.26:1056,84,0	0/0:35,0:35:96.21:0,96,979	0/0:16,0:16:33.07:0,33,336	0/0:8,0:8:21.04:0,21,214	0/0:48,0:48:99:0,120,1216	1/1:1,7:8:24.08:300,24,0	1/1:1,9:10:21.07:263,21,0	1/1:5,35:40:96.30:1196,96,0	1/1:0,10:10:27.09:340,27,0	1/1:4,12:16:30.10:375,30,0	1/1:1,13:14:36.12:452,36,0	1/1:0,4:4:9.03:113,9,0
chr10	15025961	.	A	AG	10874.88	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-11.569;DP=689;FS=40.339;HRun=8;HaplotypeScore=77.4258;InbreedingCoeff=0.9967;MQ=81.43;MQ0=0;MQRankSum=-3.644;QD=26.33;ReadPosRankSum=-0.033;VQSLOD=2.4406;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,138,1256	1/1:2,9:11:21.06:241,21,0	0/0:29,0:27:31.56:0,32,359	0/0:28,0:27:56.72:0,57,497	1/1:6,18:24:57.17:655,57,0	1/1:0,17:17:51.15:589,51,0	1/1:5,20:25:45.13:519,45,0	1/1:10,9:21:32.78:331,33,0	1/1:2,20:22:48.14:549,48,0	1/1:2,22:24:66.20:762,66,0	1/1:2,17:19:51.15:589,51,0	0/0:20,0:20:60.03:0,60,549	0/0:23,0:23:63.03:0,63,576	0/0:27,0:27:72.04:0,72,658	1/1:0,26:26:60.18:693,60,0	1/1:2,9:11:18.05:207,18,0	1/1:1,34:35:99:1136,99,0	1/1:5,24:29:66.20:762,66,0	1/1:8,20:28:57.14:644,57,0	1/1:7,9:16:27.03:295,27,0	1/1:6,52:59:99:1612,120,0	0/0:25,0:25:69.03:0,69,631	0/0:17,0:17:48.01:0,48,435	0/0:23,0:23:44.88:0,45,399	0/0:29,0:30:83.07:0,83,743	1/1:3,17:20:51.11:566,51,0	1/1:2,16:18:45.13:519,45,0	1/1:1,7:8:18.05:208,18,0
chr10	15026426	.	AGTG	A	15424.54	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-3.992;DP=501;FS=10.968;HRun=0;HaplotypeScore=113.3088;InbreedingCoeff=0.9405;MQ=90.73;MQ0=0;MQRankSum=-10.211;QD=34.05;ReadPosRankSum=6.432;VQSLOD=4.8986;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,35:37:66.22:1046,66,0	1/1:0,5:5:12.04:190,12,0	0/0:24,0:24:60.17:0,60,1098	0/0:24,0:24:57.19:0,57,1111	1/1:2,15:17:27.56:429,28,0	1/1:1,12:13:30.10:476,30,0	1/1:2,23:25:45.15:703,45,0	1/1:3,21:24:63.17:947,63,0	1/1:5,9:14:21.07:333,21,0	1/1:1,22:23:69.22:1071,69,0	1/1:1,10:11:24.08:380,24,0	1/1:3,11:14:27.09:428,27,0	1/1:1,4:5:9.03:143,9,0	1/1:1,16:17:39.13:618,39,0	1/1:0,8:8:15.05:238,15,0	1/1:0,9:9:27.09:428,27,0	1/1:1,20:21:45.15:714,45,0	1/1:2,20:22:60.20:952,60,0	1/1:4,13:17:39.11:575,39,0	1/1:4,10:14:24.08:380,24,0	1/1:3,26:29:45.15:714,45,0	1/1:1,18:19:39.13:618,39,0	1/1:3,15:18:26.59:428,27,0	1/1:3,25:28:51.10:808,51,0	1/1:1,15:16:39.13:618,39,0	1/1:1,17:18:51.17:808,51,0	1/1:0,22:22:66.23:1046,66,0	1/1:0,7:7:21.07:333,21,0
chr10	15026469	.	AACAC	A	1142.12	PASS	AB=0.880;AC=15;AF=0.288;AN=52;BaseQRankSum=-2.595;DP=541;FS=0.736;HRun=0;HaplotypeScore=172.9181;InbreedingCoeff=0.5800;MQ=62.39;MQ0=5;MQRankSum=0.028;QD=7.51;ReadPosRankSum=3.662;VQSLOD=2.6347;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:27.08:0,27,450	1/1:5,1:6:6.02:93,6,0	./.	./.	0/0:11,1:14:7.57:0,8,32	0/0:11,0:15:17.36:0,17,117	0/1:17,1:21:13.28:63,0,13	0/0:24,0:24:0.47:0,0,1	1/1:9,3:12:18.03:252,18,0	1/1:23,1:25:10.31:140,10,0	1/1:10,2:12:15.05:229,15,0	0/0:18,0:18:9.01:0,9,111	0/0:11,0:11:11.95:0,12,165	0/0:14,0:16:11.99:0,12,168	0/0:12,0:12:12.04:0,12,219	0/0:9,0:13:15.01:0,15,261	0/1:16,4:20:10.89:251,0,11	0/1:26,1:30:0.22:0,0,650	0/0:16,0:16:9:0,9,142	0/0:12,0:12:15.05:0,15,262	0/0:41,0:42:54.18:0,54,974	0/0:12,0:13:11.56:0,12,202	0/0:12,0:12:3.01:0,3,60	0/0:28,0:32:30.10:0,30,519	0/0:17,0:20:11.07:0,11,155	0/0:18,0:18:3.01:0,3,42	1/1:14,3:17:9.03:140,9,0	1/1:6,3:9:9.03:140,9,0
chr10	15028405	.	GGT	G	2923.17	PASS	AB=0.786;AC=21;AF=0.420;AN=50;BaseQRankSum=-1.653;DP=695;FS=0.000;HRun=0;HaplotypeScore=125.8756;InbreedingCoeff=0.8363;MQ=58.72;MQ0=10;MQRankSum=2.087;QD=10.33;ReadPosRankSum=4.818;VQSLOD=2.9115;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:12,11:27:32.59:309,33,0	./.	./.	./.	1/1:6,0:17:7.36:22,7,0	1/1:6,0:18:14.20:70,14,0	1/1:13,0:35:33.59:163,34,0	0/0:30,0:30:23.86:0,24,206	0/0:18,0:31:11.42:0,11,75	0/0:21,0:25:29.80:0,30,251	0/0:6,0:12:8.35:0,8,39	1/1:11,12:26:44.45:423,44,0	1/1:11,12:27:41.50:409,42,0	1/1:15,12:28:38.07:388,38,0	0/0:13,0:21:14.99:0,15,128	0/0:11,0:18:11.87:0,12,93	0/0:10,0:23:12.47:0,12,106	0/0:10,0:17:8.98:0,9,74	0/0:22,0:22:12.69:0,13,87	0/0:9,0:16:11.87:0,12,87	0/0:39,0:57:6:0,6,52	1/1:14,8:21:17.75:181,18,0	0/1:16,4:22:18.76:171,0,19	1/1:15,19:38:25.28:673,25,0	1/1:10,12:22:29.91:314,30,0	0/0:28,0:39:56.71:0,57,437	0/0:15,0:16:20.95:0,21,174	0/0:5,0:14:14.99:0,15,128
chr10	15029146	.	GT	G	4505.37	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-14.877;DP=653;FS=6.659;HRun=10;HaplotypeScore=121.1264;InbreedingCoeff=0.9942;MQ=78.46;MQ0=1;MQRankSum=1.743;QD=22.09;ReadPosRankSum=1.781;VQSLOD=4.0831;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:50:99:0,105,543	0/0:3,0:9:14.20:0,14,71	0/0:20,0:20:26.43:0,26,378	0/0:25,0:23:34.51:0,35,395	1/1:1,19:20:53.98:469,54,0	1/1:0,23:23:59.99:521,60,0	1/1:1,20:21:56.99:495,57,0	0/0:11,0:33:65.96:0,66,394	0/0:2,0:20:42.61:0,43,213	0/0:6,0:22:48.65:0,49,268	0/0:8,0:24:45.82:0,46,248	0/0:1,0:23:30.95:0,31,152	0/0:4,0:12:17.27:0,17,92	0/0:10,0:25:37.61:0,38,205	1/1:1,30:31:83.98:729,84,0	1/1:4,16:20:47.97:417,48,0	0/0:5,0:28:63.18:0,63,365	1/1:5,16:21:47.02:397,47,0	1/1:6,14:20:41.95:359,42,0	1/1:1,20:21:59.99:521,60,0	1/1:3,24:27:68.98:599,69,0	0/0:4,0:23:35.39:0,35,202	0/0:3,0:17:23.75:0,24,106	0/0:2,0:22:39.34:0,39,194	0/0:6,0:16:20.90:0,21,101	0/0:6,0:33:76.73:0,77,383	0/0:5,0:23:48.36:0,48,242	0/0:4,0:21:45.62:0,46,246
chr10	15029620	.	T	TTTGG	10540.45	PASS	AB=1.000;AC=35;AF=0.625;AN=56;BaseQRankSum=-12.156;DP=456;FS=3.022;HRun=0;HaplotypeScore=91.9038;InbreedingCoeff=0.8758;MQ=57.31;MQ0=3;MQRankSum=-1.209;QD=38.61;ReadPosRankSum=1.997;VQSLOD=4.6779;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,12:19:24.08:606,24,0	0/0:5,0:5:12.01:0,12,116	0/0:25,0:16:23.84:0,24,289	0/0:23,0:18:19.20:0,19,280	1/1:7,10:17:24.97:590,25,0	1/1:2,12:14:18.06:432,18,0	1/1:8,15:23:33.07:736,33,0	0/1:14,0:14:71:71,0,116	0/0:13,0:13:34.25:0,34,299	0/0:17,0:17:11.67:0,12,222	0/0:14,0:14:28.23:0,28,252	1/1:0,5:5:15.05:379,15,0	1/1:0,10:10:27.09:681,27,0	1/1:5,3:8:12.04:294,12,0	1/1:3,18:21:39.13:982,39,0	1/1:6,15:21:19.36:902,19,0	0/0:31,0:31:44.98:0,45,524	1/1:4,14:18:33.11:832,33,0	1/1:4,6:10:20.95:273,21,0	1/1:5,10:16:27.50:610,27,0	1/1:5,17:22:39.13:926,39,0	1/1:1,14:15:36.12:899,36,0	1/1:3,9:12:18.06:424,18,0	1/1:6,10:16:24.08:603,24,0	1/1:6,4:10:12.04:303,12,0	0/0:27,0:27:15.91:0,16,458	0/0:14,0:14:5.06:0,5,311	0/0:13,0:13:21.87:0,22,183
chr10	15030978	.	T	TGA	13787.68	PASS	AB=0.515;AC=33;AF=0.589;AN=56;BaseQRankSum=-5.497;DP=534;FS=0.709;HRun=0;HaplotypeScore=86.1093;InbreedingCoeff=0.9193;MQ=76.13;MQ0=0;MQRankSum=-2.912;QD=43.91;ReadPosRankSum=2.636;VQSLOD=6.5598;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,32:35:75.24:1413,75,0	0/0:4,0:4:12.04:0,12,184	0/0:19,0:19:26.93:0,27,792	0/0:14,0:13:13.73:0,14,365	1/1:0,27:28:57.20:1095,57,0	1/1:0,16:16:39.13:753,39,0	1/1:1,22:22:57.20:1101,57,0	0/0:29,0:29:81.26:0,81,1202	0/0:15,0:15:39.12:0,39,575	0/0:25,0:25:69.23:0,69,1055	0/0:21,0:21:57.19:0,57,862	1/1:2,15:16:45.15:865,45,0	1/1:2,8:10:30.10:567,30,0	1/1:4,11:15:36.12:691,36,0	1/1:1,15:16:42.14:812,42,0	0/1:1,16:17:12.84:547,0,13	0/0:31,0:31:90.28:0,90,1351	1/1:4,22:26:75.26:1431,75,0	1/1:1,11:12:36.11:664,36,0	1/1:1,15:16:27.09:519,27,0	1/1:4,20:24:69.22:1300,69,0	1/1:4,11:15:33.10:595,33,0	1/1:6,10:16:24.08:462,24,0	1/1:6,12:18:36.12:684,36,0	1/1:0,10:10:15.05:289,15,0	0/0:27,0:27:75.25:0,75,1130	0/0:26,0:26:72.24:0,72,1097	0/0:9,0:9:27.05:0,27,382
chr10	15031021	.	GTGGT	G	6213.30	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=6.121;DP=557;FS=1.317;HRun=0;HaplotypeScore=126.1369;InbreedingCoeff=0.9871;MQ=53.56;MQ0=15;MQRankSum=-7.602;QD=48.92;ReadPosRankSum=2.193;VQSLOD=5.6834;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,35:37:86.94:1782,87,0	0/0:5,0:5:15.05:0,15,433	0/0:10,0:5:12.02:0,12,213	0/0:19,0:7:17.91:0,18,387	0/0:28,0:26:66.23:0,66,1857	0/0:20,0:19:54.19:0,54,1564	0/0:21,0:19:54.17:0,54,1417	0/0:26,0:26:78.24:0,78,2045	0/0:12,0:12:36.12:0,36,1043	0/0:43,0:41:99:0,123,3321	0/0:24,0:24:60.19:0,60,1652	1/1:1,11:12:30.09:590,30,0	1/1:0,7:7:21.07:440,21,0	1/1:1,19:20:54.17:1091,54,0	0/0:18,0:18:48.16:0,48,1353	0/0:19,0:19:57.20:0,57,1651	0/0:29,0:29:87.28:0,87,2419	0/0:33,0:33:99:0,99,2700	0/0:15,0:12:36.11:0,36,979	0/0:14,0:14:30.10:0,30,867	0/0:16,0:16:45.15:0,45,1295	1/1:1,11:12:30.10:611,30,0	1/1:0,13:13:33.11:690,33,0	1/1:2,17:19:36.11:697,36,0	1/1:1,6:7:15.05:314,15,0	0/0:37,0:37:99:0,111,3107	0/0:25,0:25:72.18:0,72,1944	0/0:16,0:16:48.16:0,48,1268
chr10	15031306	.	ATG	A	11744.17	PASS	AB=0.628;AC=33;AF=0.589;AN=56;BaseQRankSum=13.365;DP=1098;FS=17.783;HRun=0;HaplotypeScore=164.3766;InbreedingCoeff=0.8971;MQ=53.65;MQ0=12;MQRankSum=2.714;QD=17.63;ReadPosRankSum=2.922;VQSLOD=3.5272;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:30,52:82:99:2070,163,0	0/0:5,0:5:15.05:0,15,251	0/0:47,0:18:34.92:0,35,426	0/0:59,0:25:34.78:0,35,553	1/1:4,25:29:60.16:764,60,0	1/1:2,19:21:45.14:573,45,0	1/1:4,39:43:59.85:763,60,0	0/0:39,0:39:94.29:0,94,1494	0/0:58,0:58:99:0,150,2453	0/0:62,0:62:99:0,127,2591	0/0:18,0:18:42.14:0,42,693	1/1:5,55:59:99:1258,99,0	1/1:7,37:44:62.99:798,63,0	1/1:2,46:47:77.20:991,77,0	1/1:12,29:41:26.96:342,27,0	0/1:11,16:26:99:214,0,121	0/0:43,0:43:99:0,100,1577	1/1:11,14:24:46.94:569,47,0	1/1:12,9:18:33.10:417,33,0	1/1:1,15:16:3.01:38,3,0	1/1:48,37:84:45.57:559,46,0	1/1:2,8:9:15.04:177,15,0	1/1:3,15:18:27.09:344,27,0	1/1:13,57:70:99:1410,109,0	1/1:2,24:26:35.97:458,36,0	0/0:64,2:66:99:0,104,2701	0/0:24,0:24:63.20:0,63,1022	0/0:11,0:11:30.10:0,30,501
chr10	15031330	.	GTGTGCA	G	1535.40	PASS	AB=0.625;AC=11;AF=0.196;AN=56;BaseQRankSum=5.012;DP=1035;FS=9.090;HRun=0;HaplotypeScore=266.9932;InbreedingCoeff=0.8226;MQ=52.36;MQ0=11;MQRankSum=-2.894;QD=8.67;ReadPosRankSum=-5.358;VQSLOD=0.5059;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:72,0:71:99:0,135,4382	0/0:5,0:5:12.04:0,12,357	0/0:44,0:17:41.31:0,41,972	0/0:50,0:26:50.84:0,51,1168	0/0:26,0:26:60.16:0,60,1682	0/0:24,0:24:63.22:0,63,1948	0/0:46,0:46:77.45:0,77,2190	0/0:36,0:36:78.25:0,78,2091	0/0:58,0:58:99:0,156,4648	0/0:68,0:68:99:0,155,4564	0/0:18,0:18:45.12:0,45,1296	0/0:67,0:66:99:0,123,3671	0/0:40,0:40:84.45:0,84,2389	0/0:46,0:45:87.78:0,88,2736	1/1:9,26:35:9.03:160,9,0	0/1:10,15:24:99:297,0,278	0/0:41,0:41:99:0,105,3375	1/1:13,5:17:26.98:405,27,0	1/1:9,4:11:21.01:366,21,0	1/1:2,13:15:2.99:49,3,0	1/1:52,18:70:27.16:425,27,0	0/0:13,0:12:21.06:0,21,578	0/0:16,0:16:33.09:0,33,1021	0/0:69,0:68:99:0,107,3127	0/0:22,0:22:44.98:0,45,1385	0/0:64,0:64:99:0,144,4322	0/0:22,0:22:63.20:0,63,1898	0/0:11,0:11:30.10:0,30,774
chr10	15031399	.	C	CGT	8309.59	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=0.493;DP=931;FS=9.143;HRun=0;HaplotypeScore=217.6446;InbreedingCoeff=0.8943;MQ=49.94;MQ0=7;MQRankSum=-1.224;QD=14.89;ReadPosRankSum=3.825;VQSLOD=3.8040;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:46,0:48:47.60:604,48,0	0/0:6,0:6:3.01:0,3,37	0/0:34,0:13:24.07:0,24,296	0/0:45,0:21:26.28:0,26,321	1/1:14,0:22:5.72:53,6,0	1/1:11,1:28:35.89:309,36,0	1/1:15,4:37:41.61:429,42,0	0/0:49,0:48:99:0,105,1255	0/0:37,0:39:57.13:0,57,675	0/0:55,0:55:99:0,132,1661	0/0:18,0:19:26.77:0,27,296	1/1:39,0:44:50.94:618,51,0	1/1:39,0:39:55.56:644,56,0	1/1:35,0:33:38.72:465,39,0	1/1:8,16:25:39.13:643,39,0	1/1:10,15:25:41.04:649,41,0	0/0:46,0:46:99:0,103,1252	1/1:2,21:23:66.23:1078,66,0	1/1:12,15:23:4.79:572,5,0	1/1:9,8:17:21.01:341,21,0	1/1:36,67:101:43.51:1212,44,0	1/1:14,0:15:18.02:214,18,0	1/1:10,0:12:6.02:70,6,0	1/1:30,0:32:29.56:374,30,0	1/1:13,0:20:2.36:36,2,0	0/0:45,0:46:86.73:0,87,1194	0/0:22,0:22:57.18:0,57,709	0/0:9,0:10:14.84:0,15,163
chr10	15031401	.	T	TGC	7301.31	PASS	AB=0.998;AC=28;AF=0.500;AN=56;BaseQRankSum=1.582;DP=941;FS=9.957;HRun=0;HaplotypeScore=232.6228;InbreedingCoeff=0.6860;MQ=49.57;MQ0=7;MQRankSum=1.228;QD=13.42;ReadPosRankSum=4.711;VQSLOD=3.0337;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,29:47:65.52:1055,66,0	0/0:6,0:6:3.01:0,3,46	0/0:34,0:12:33.07:0,33,446	0/0:46,0:21:43.79:0,44,538	0/0:22,0:22:1.03:0,1,21	0/1:27,0:27:1.05:1,0,40	0/1:38,0:38:5.48:69,0,5	0/0:48,0:47:99:0,126,1776	0/0:40,0:40:75.13:0,75,982	0/0:57,0:57:99:0,150,2220	0/0:19,0:19:29.84:0,30,400	1/1:15,26:41:59.95:998,60,0	1/1:18,26:43:59.59:1039,60,0	1/1:12,25:34:53.53:831,54,0	1/1:25,0:25:38.97:333,39,0	1/1:26,0:25:25.90:317,26,0	0/0:48,0:48:99:0,132,1774	1/1:23,0:23:49:556,49,0	0/1:27,0:23:99:229,0,156	1/1:16,0:16:20.72:165,21,0	0/1:107,0:104:99:518,0,113	1/1:6,10:16:18.03:346,18,0	1/1:6,7:13:9.01:140,9,0	1/1:12,23:34:32.41:596,32,0	1/1:11,9:20:8.35:107,8,0	0/0:46,0:46:99:0,122,1671	0/0:21,0:21:57.19:0,57,869	0/0:10,0:10:17.87:0,18,221
chr10	15031430	.	A	ACATG	1468.82	PASS	AB=0.854;AC=5;AF=0.089;AN=56;BaseQRankSum=6.589;DP=908;FS=1.993;HRun=0;HaplotypeScore=328.4432;InbreedingCoeff=-0.1259;MQ=46.79;MQ0=9;MQRankSum=-7.221;QD=8.39;ReadPosRankSum=-3.936;VQSLOD=1.4393;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,7:40:7.12:0,7,241	0/0:10,0:10:9.02:0,9,159	0/0:25,0:4:12.04:0,12,219	0/0:37,0:19:48.15:0,48,954	0/0:24,0:24:3.01:0,3,63	0/0:17,0:17:17.36:0,17,299	0/0:33,0:32:33.41:0,33,508	0/0:43,0:44:99:0,131,2453	0/0:40,0:40:67.19:0,67,1138	0/0:60,0:60:99:0,152,2823	0/0:25,0:25:42.14:0,42,719	0/1:34,15:49:99:705,0,305	0/1:33,6:38:99:574,0,421	0/1:29,3:31:99:240,0,299	0/0:26,0:26:26.93:0,27,448	0/0:29,0:28:37.11:0,37,679	0/0:44,0:44:99:0,120,2206	0/0:21,0:21:57.01:0,57,998	0/0:18,0:17:47.91:0,48,816	0/0:20,0:20:24.07:0,24,408	0/0:100,0:99:69.74:0,70,1642	0/0:16,0:16:2.90:0,3,63	0/0:11,6:17:5.37:0,5,122	0/1:28,5:32:25.73:26,0,136	0/1:18,3:21:40.50:40,0,54	0/0:46,0:46:99:0,127,2281	0/0:26,0:26:69.18:0,69,1256	0/0:12,0:12:21.07:0,21,334
chr10	15031432	.	CTG	C	5432.38	PASS	AB=0.878;AC=28;AF=0.519;AN=54;BaseQRankSum=-8.705;DP=945;FS=33.511;HRun=0;HaplotypeScore=307.5143;InbreedingCoeff=0.0885;MQ=46.19;MQ0=8;MQRankSum=8.464;QD=7.74;ReadPosRankSum=8.932;VQSLOD=2.9130;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,8:43:3.83:0,4,14	1/1:9,1:10:2.19:15,2,0	0/0:24,0:4:5.61:0,6,59	0/0:35,0:18:6.58:0,7,349	0/0:23,2:25:9.63:0,10,28	0/0:14,2:16:2.74:0,3,9	0/1:24,8:31:5.82:86,0,6	1/1:44,2:46:67.89:1058,68,0	0/1:38,3:40:19.26:35,0,19	0/1:60,1:63:7.62:768,0,8	1/1:25,2:27:26.41:161,26,0	0/1:51,6:57:55.24:55,0,100	0/1:36,7:42:63.63:64,0,122	0/1:32,7:36:15.24:15,0,46	0/1:20,6:26:3.18:84,0,3	1/1:23,5:27:17.78:276,18,0	1/1:42,3:45:32.83:501,33,0	1/1:18,3:21:2.11:286,2,0	0/1:15,3:17:17.05:205,0,17	0/1:15,6:22:19.53:134,0,20	1/1:88,14:99:1.95:621,2,0	./.	0/0:17,3:20:5.20:0,5,31	0/0:28,6:33:3.03:0,3,14	0/0:21,5:26:4.06:0,4,16	1/1:39,5:44:5.32:701,5,0	1/1:24,1:26:16.22:364,16,0	0/1:12,0:12:3.19:3,0,10
chr10	15031437	.	T	TGTGTGC	6864.39	PASS	AB=1.000;AC=37;AF=0.661;AN=56;BaseQRankSum=1.694;DP=945;FS=23.134;HRun=0;HaplotypeScore=354.4928;InbreedingCoeff=-0.1003;MQ=45.73;MQ0=8;MQRankSum=0.149;QD=7.95;ReadPosRankSum=5.042;VQSLOD=2.1825;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:47,0:46:26.95:39,0,27	1/1:10,0:10:11.56:79,12,0	0/0:23,0:3:5.61:0,6,59	0/0:38,0:17:1.29:0,1,451	0/1:25,0:25:0.08:0,0,1	1/1:15,0:15:2.98:22,3,0	1/1:27,0:26:12.74:90,13,0	1/1:46,0:46:56.41:806,56,0	0/1:40,0:39:59.08:168,0,59	0/1:65,0:65:95.83:797,0,96	0/1:25,0:25:64.17:230,0,64	0/1:56,0:56:33.39:372,0,33	0/1:40,0:39:3.72:419,0,4	0/1:38,0:36:58.57:70,0,59	1/1:13,11:29:14.71:283,15,0	1/1:21,7:27:23.52:526,24,0	0/1:45,0:46:99:539,0,102	1/1:19,0:19:25.44:322,25,0	1/1:18,1:18:6.50:301,7,0	1/1:16,8:25:1.98:74,2,0	1/1:103,1:100:83.33:769,83,0	0/1:18,0:19:0:0,0,0	0/0:21,0:21:5.08:0,5,30	1/1:35,0:34:1.19:33,1,0	0/1:26,0:26:13.47:56,0,13	0/1:47,0:47:99:527,0,185	0/1:25,0:25:36.38:314,0,36	1/1:7,0:7:3.46:26,3,0
chr10	15031438	.	G	GTGTACATGTA	2564.19	PASS	AB=0.961;AC=15;AF=0.268;AN=56;BaseQRankSum=6.478;DP=946;FS=21.426;HRun=0;HaplotypeScore=408.0817;InbreedingCoeff=0.1276;MQ=45.75;MQ0=9;MQRankSum=-9.697;QD=6.70;ReadPosRankSum=-0.115;VQSLOD=0.2520;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:44,2:46:83.39:122,0,83	0/0:10,0:10:11.96:0,12,187	0/0:21,0:3:6.02:0,6,145	0/0:40,0:17:21.60:0,22,780	1/1:25,0:25:1.80:4,2,0	1/1:14,0:14:4.84:141,5,0	1/1:27,0:26:13.63:396,14,0	0/0:45,0:45:99:0,116,1239	0/0:40,0:39:47.40:0,47,772	0/0:66,0:66:99:0,158,2258	0/0:25,0:25:45.15:0,45,785	0/1:54,2:56:99:839,0,122	0/1:37,3:39:99:931,0,160	0/1:36,2:36:99:213,0,206	0/1:27,0:28:32.05:32,0,81	0/1:28,0:27:22.28:22,0,369	0/0:45,0:45:99:0,122,2009	0/0:19,0:19:41.95:0,42,517	0/0:19,0:18:7.99:0,8,408	0/0:25,0:25:19.72:0,20,303	0/0:109,0:105:99:0,104,1462	0/1:19,0:19:0:0,0,0	0/0:20,0:20:3.24:0,3,58	0/1:35,0:34:11.24:11,0,14	0/1:22,3:26:2.10:2,0,93	0/0:46,0:46:99:0,125,1985	0/0:25,0:25:66.13:0,66,1013	0/0:7,0:7:6.02:0,6,103
chr10	15031439	.	T	TGTACATGTATGTGTGC	5688.31	PASS	AB=0.913;AC=16;AF=0.296;AN=54;BaseQRankSum=-6.019;DP=944;FS=2.163;HRun=0;HaplotypeScore=454.9085;InbreedingCoeff=0.6070;MQ=45.55;MQ0=9;MQRankSum=-6.615;QD=17.34;ReadPosRankSum=-3.916;VQSLOD=1.5062;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:44,3:46:10.17:248,10,0	0/0:10,0:10:11.91:0,12,219	0/0:20,0:2:6.02:0,6,145	0/0:40,0:17:23.23:0,23,899	0/1:25,0:25:0.43:0,0,1	1/1:13,0:13:3.11:117,3,0	1/1:27,0:26:14.87:343,15,0	0/0:44,0:45:99:0,112,1312	0/0:39,0:38:49.39:0,49,1030	0/0:64,0:65:99:0,135,2403	0/0:25,0:25:44.92:0,45,880	1/1:46,9:56:39.12:2168,39,0	1/1:31,6:37:57.96:2001,58,0	0/1:35,4:37:4.91:612,0,5	0/0:26,0:27:3.21:0,3,131	0/0:27,0:27:4.62:0,5,437	0/0:44,0:44:99:0,119,2576	0/0:18,0:19:42.38:0,42,558	0/0:19,0:18:5.43:0,5,367	0/0:25,0:25:17.62:0,18,322	0/0:104,0:104:67.72:0,68,1500	./.	1/1:19,1:20:4.75:64,5,0	0/1:31,4:34:12.71:19,0,13	0/1:23,5:28:1.38:116,0,1	0/0:46,0:46:99:0,124,2320	0/0:25,0:25:65.90:0,66,1270	0/0:7,0:7:6.02:0,6,125
chr10	15031440	.	G	GTACA	1533.05	PASS	AB=0.979;AC=13;AF=0.232;AN=56;BaseQRankSum=9.516;DP=939;FS=20.145;HRun=0;HaplotypeScore=344.9405;InbreedingCoeff=0.0031;MQ=45.45;MQ0=9;MQRankSum=-9.454;QD=4.28;ReadPosRankSum=0.649;VQSLOD=0.7467;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:46,2:47:70.07:70,0,76	0/0:10,0:10:10.51:0,11,47	0/0:21,0:2:6.02:0,6,116	0/0:39,0:16:36.28:0,36,604	0/0:9,15:24:0:0,0,1	1/1:10,3:13:5.94:104,6,0	1/1:17,9:25:6.95:250,7,0	0/0:45,0:45:98.92:0,99,911	0/0:39,0:38:44:0,44,396	0/0:63,0:63:99:0,106,1407	0/0:25,0:25:38.20:0,38,242	0/1:53,3:56:99:411,0,131	0/1:36,2:37:99:611,0,100	0/1:38,0:36:81.58:82,0,166	0/1:26,0:27:27.50:46,0,28	0/1:28,0:27:44.60:45,0,220	0/0:44,0:44:99:0,108,968	0/1:17,0:17:18:18,0,353	0/0:19,0:18:16.49:0,16,390	0/0:26,0:26:20.25:0,20,226	0/0:107,0:103:28.51:0,29,851	0/0:21,0:21:3:0,3,25	0/0:19,1:20:5.28:0,5,49	0/1:36,2:37:19.97:20,0,28	0/1:29,0:29:28.23:28,0,85	0/0:46,0:46:99:0,125,1319	0/0:25,0:25:56.67:0,57,551	0/0:7,0:7:5.21:0,5,32
chr10	15031441	.	T	TGC	7705.03	PASS	AB=0.918;AC=35;AF=0.625;AN=56;BaseQRankSum=-1.667;DP=907;FS=19.293;HRun=0;HaplotypeScore=288.9109;InbreedingCoeff=-0.0960;MQ=45.83;MQ0=9;MQRankSum=0.732;QD=9.29;ReadPosRankSum=6.369;VQSLOD=3.0899;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:44,0:43:16.60:17,0,97	1/1:1,9:10:12.04:213,12,0	0/0:20,0:2:6.01:0,6,69	0/0:38,0:15:9.70:0,10,372	0/1:18,0:21:0.34:0,0,1	0/1:7,0:10:10.81:11,0,18	1/1:24,0:24:4.91:54,5,0	1/1:41,3:44:72.41:692,72,0	1/1:15,25:39:1.31:525,1,0	0/1:17,45:62:0.73:1282,0,1	1/1:3,22:26:8.31:632,8,0	0/1:52,0:53:51.87:135,0,52	0/1:34,0:34:71.19:118,0,71	0/1:31,0:31:10.19:10,0,112	1/1:27,0:27:19.75:152,20,0	1/1:28,1:28:8.86:309,9,0	1/1:29,14:43:64.06:1210,64,0	0/1:17,0:17:22.98:170,0,23	0/1:17,0:16:72.99:73,0,76	0/1:24,1:25:17.02:81,0,17	0/1:102,5:103:99:546,0,115	0/0:19,0:19:3:0,3,25	0/1:17,0:18:11.51:12,0,18	0/1:33,0:33:2.47:2,0,35	0/1:29,0:29:1.84:2,0,123	0/1:37,11:48:51.72:809,0,52	1/1:19,6:25:26.44:554,26,0	1/1:1,6:7:6.02:96,6,0
chr10	15031449	.	T	TGC	700.91	PASS	AB=0.992;AC=16;AF=0.286;AN=56;BaseQRankSum=8.645;DP=906;FS=10.356;HRun=0;HaplotypeScore=310.3812;InbreedingCoeff=-0.0974;MQ=44.87;MQ0=11;MQRankSum=0.898;QD=1.58;ReadPosRankSum=8.201;VQSLOD=0.6177;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:48,1:48:0.33:0,0,56	1/1:10,0:10:11.14:59,11,0	0/0:19,0:2:2.88:0,3,15	0/0:30,0:9:19.76:0,20,172	0/1:24,0:23:0.60:1,0,1	0/0:14,0:14:10.22:0,10,67	0/0:31,0:30:16.96:0,17,90	0/0:35,0:35:40.89:0,41,495	0/1:39,0:38:91.22:91,0,140	0/1:57,0:57:99:144,0,471	0/1:27,0:27:73.11:93,0,73	0/1:54,1:55:99:101,0,197	0/1:37,1:37:79.10:79,0,214	0/0:36,0:34:15.22:0,15,202	0/1:28,0:28:9.18:9,0,43	0/1:30,0:29:25.74:26,0,156	0/1:42,0:42:99:107,0,275	0/0:14,0:14:15.31:0,15,207	0/0:15,0:14:33.01:0,33,270	0/0:26,0:26:5.37:0,5,168	0/0:103,0:99:4.49:0,4,534	0/0:21,0:21:5.67:0,6,35	0/1:17,1:18:5.40:7,0,5	0/0:37,0:36:5.21:0,5,59	0/0:29,1:30:5.73:0,6,59	0/1:49,0:49:34.34:34,0,611	0/1:24,0:24:60.96:61,0,171	1/1:4,0:4:5.84:40,6,0
chr10	15031924	.	C	CTTT	9060.34	PASS	AB=0.551;AC=49;AF=0.875;AN=56;BaseQRankSum=-1.285;DP=719;FS=0.722;HRun=9;HaplotypeScore=141.0079;InbreedingCoeff=0.5115;MQ=74.79;MQ0=0;MQRankSum=-4.391;QD=13.36;ReadPosRankSum=4.429;VQSLOD=1.5154;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,0:50:48.23:104,48,0	1/1:1,0:7:11.95:92,12,0	0/0:24,0:24:43.05:0,43,540	0/0:14,0:13:11.64:0,12,146	1/1:2,0:27:28.35:74,28,0	1/1:4,0:32:31.15:67,31,0	0/1:4,0:28:18.05:22,0,18	1/1:2,0:24:55.33:453,55,0	1/1:4,1:22:37.13:314,37,0	1/1:6,0:25:50.79:391,51,0	1/1:1,1:23:59.47:483,59,0	1/1:0,0:23:27.72:60,28,0	0/1:5,0:29:19.42:21,0,19	1/1:3,0:24:17.44:38,17,0	1/1:5,24:31:51.15:930,51,0	1/1:5,23:31:59.99:1151,60,0	1/1:2,0:25:47.82:368,48,0	1/1:4,26:35:68.20:1180,68,0	1/1:16,8:24:32.34:615,32,0	1/1:4,21:30:68.86:896,69,0	1/1:2,11:15:18.93:321,19,0	1/1:10,0:26:38.17:187,38,0	0/1:6,0:25:9.84:10,0,88	1/1:2,0:23:22.43:48,22,0	1/1:2,0:25:22.74:50,23,0	1/1:1,1:21:52.09:434,52,0	1/1:3,0:33:68.43:516,68,0	1/1:6,0:20:32.38:235,32,0
chr10	15032424	.	AGTCGTC	A	6826.99	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-5.969;DP=599;FS=0.910;HRun=0;HaplotypeScore=150.5328;InbreedingCoeff=0.9258;MQ=77.31;MQ0=1;MQRankSum=-7.863;QD=31.32;ReadPosRankSum=2.881;VQSLOD=4.4120;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:42:44.35:0,44,829	1/1:3,8:11:18.06:376,18,0	0/0:33,0:29:47.18:0,47,1084	0/0:42,0:41:72.23:0,72,1823	1/1:8,11:19:24.08:514,24,0	1/1:5,10:13:21.07:450,21,0	1/1:7,25:32:51.17:1092,51,0	1/1:14,15:29:45.10:822,45,0	1/1:3,4:7:3.01:64,3,0	1/1:7,16:23:48.16:978,48,0	1/1:4,4:8:9.03:192,9,0	0/0:12,0:25:36.06:0,36,653	0/0:4,0:14:21.07:0,21,546	0/0:6,0:14:21.07:0,21,504	0/0:10,0:28:54.17:0,54,1333	0/0:8,0:23:51.15:0,51,1150	1/1:7,13:20:15.02:278,15,0	0/0:9,0:32:57.20:0,57,1544	0/0:16,0:18:33.11:0,33,725	0/0:12,0:17:30.09:0,30,664	0/0:21,0:48:84.27:0,84,2148	0/0:5,0:12:12.04:0,12,259	0/0:3,0:10:14.93:0,15,223	0/0:8,0:13:6.02:0,6,133	0/0:6,0:6:6.02:0,6,106	1/1:10,19:29:57.15:1053,57,0	1/1:4,14:18:30.10:643,30,0	1/1:0,7:7:21.01:365,21,0
chr10	15032572	.	G	GACACACACACACAC	6282.19	PASS	AB=0.853;AC=42;AF=0.750;AN=56;BaseQRankSum=4.314;DP=566;FS=4.129;HRun=0;HaplotypeScore=201.7000;InbreedingCoeff=0.5361;MQ=55.12;MQ0=8;MQRankSum=-6.440;QD=14.68;ReadPosRankSum=-3.613;VQSLOD=3.1433;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:31,0:31:12.04:432,12,0	1/1:10,0:10:3.01:106,3,0	1/1:30,0:15:4.94:22,5,0	0/0:37,0:20:6.02:0,6,77	1/1:25,0:25:14.20:362,14,0	1/1:4,0:15:15.02:277,15,0	0/1:14,0:24:11.59:31,0,12	1/1:28,0:28:43.38:879,43,0	1/1:12,0:11:6.02:84,6,0	1/1:25,0:24:21.03:403,21,0	1/1:15,0:15:9.03:273,9,0	1/1:10,0:17:6.49:245,6,0	1/1:12,0:20:6.49:246,6,0	1/1:8,2:11:3.01:201,3,0	0/0:22,0:24:45.15:0,45,1643	0/0:21,0:23:48.08:0,48,1486	1/1:19,0:19:24.53:609,25,0	0/1:18,0:19:12.18:12,0,674	0/0:18,0:18:15.04:0,15,365	0/0:7,0:7:6.02:0,6,235	0/0:25,0:29:13.06:0,13,872	1/1:19,0:18:3.94:25,4,0	1/1:8,0:10:3.01:102,3,0	1/1:21,0:35:8.75:347,9,0	1/1:10,0:16:6.02:285,6,0	1/1:25,0:25:43.33:953,43,0	1/1:11,0:11:6.02:210,6,0	1/1:6,0:6:6.02:179,6,0
chr10	15032981	.	AT	A	848.43	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=1.691;DP=501;FS=0.000;HRun=10;HaplotypeScore=62.4038;InbreedingCoeff=0.7653;MQ=74.27;MQ0=1;MQRankSum=1.347;QD=13.26;ReadPosRankSum=-1.429;VQSLOD=3.1185;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:59.12:0,59,465	0/0:4,0:4:12:0,12,115	0/0:16,1:12:8.97:0,9,76	0/0:16,0:11:14.81:0,15,132	1/1:3,22:25:56.96:493,57,0	1/1:1,15:16:32.99:286,33,0	1/1:2,12:14:23.99:208,24,0	0/0:29,0:29:69.16:0,69,742	0/0:17,0:17:39.11:0,39,431	0/0:16,0:16:30.02:0,30,307	0/0:20,0:20:54.06:0,54,581	0/0:17,0:17:42.04:0,42,238	0/0:14,0:14:3.18:0,3,88	0/0:10,0:10:26.03:0,26,148	0/1:9,0:9:5.01:5,0,169	0/0:13,0:13:29.86:0,30,332	0/0:28,0:28:78.21:0,78,863	0/0:22,1:22:37.12:0,37,637	0/0:30,0:30:52.22:0,52,782	0/0:22,0:22:60.14:0,60,648	0/0:16,0:16:42.07:0,42,439	0/0:14,0:14:29.48:0,29,158	0/0:4,0:4:11.49:0,11,59	0/0:23,0:23:8.35:0,8,197	0/0:14,0:14:15.60:0,16,153	0/0:19,0:19:48.12:0,48,524	0/0:23,0:23:60.15:0,60,654	0/0:8,0:8:21.02:0,21,219
chr10	15034055	.	C	CAGAGAGAGAG	10724.84	PASS	AB=1.000;AC=49;AF=0.875;AN=56;BaseQRankSum=-1.100;DP=529;FS=1.844;HRun=0;HaplotypeScore=184.2035;InbreedingCoeff=0.4930;MQ=58.00;MQ0=4;MQRankSum=-1.575;QD=23.73;ReadPosRankSum=1.837;VQSLOD=4.4227;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,2:21:8.66:389,9,0	1/1:8,0:8:3.01:38,3,0	0/0:29,0:8:3.01:0,3,75	0/0:40,0:29:9.51:0,10,50	0/1:16,0:15:0:0,0,0	1/1:8,0:5:9.01:165,9,0	1/1:18,0:18:14.73:403,15,0	1/1:35,0:31:32.88:462,33,0	1/1:24,0:24:9.02:293,9,0	1/1:18,0:18:24.06:585,24,0	0/0:8,0:7:0.47:0,0,1	1/1:9,3:13:6.02:298,6,0	1/1:13,4:17:12.04:537,12,0	1/1:17,5:24:14.85:471,15,0	1/1:17,1:18:12.04:561,12,0	1/1:12,2:15:12.04:559,12,0	1/1:14,0:13:11.99:238,12,0	1/1:20,0:23:30.01:869,30,0	1/1:18,0:19:24.08:838,24,0	1/1:14,0:14:6.01:174,6,0	1/1:16,0:16:12:258,12,0	1/1:14,0:14:2.99:130,3,0	1/1:11,1:12:6.02:291,6,0	1/1:13,4:22:17.62:825,18,0	1/1:8,1:10:9.03:319,9,0	1/1:33,0:31:41.92:1223,42,0	1/1:25,0:23:26.42:681,26,0	1/1:11,0:9:4.26:116,4,0
chr10	15036004	.	TA	T	2233.15	PASS	AB=0.731;AC=50;AF=0.893;AN=56;BaseQRankSum=-4.052;DP=386;FS=16.554;HRun=15;HaplotypeScore=69.4627;InbreedingCoeff=0.3862;MQ=70.59;MQ0=7;MQRankSum=-1.926;QD=7.27;ReadPosRankSum=2.436;VQSLOD=1.0739;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,14:21:47.10:288,47,0	1/1:3,0:4:4.96:13,5,0	0/0:44,0:23:5.44:0,5,101	0/0:33,2:10:12.20:0,12,64	1/1:8,3:11:4.63:95,5,0	0/1:7,2:9:3.79:67,0,4	1/1:3,6:9:17.49:105,17,0	1/1:12,0:18:10.79:37,11,0	1/1:4,0:10:14.58:45,15,0	1/1:8,0:11:10.80:31,11,0	1/1:6,1:9:10.40:48,10,0	1/1:6,2:8:11.64:69,12,0	1/1:8,5:14:16.64:97,17,0	1/1:7,3:9:14.69:91,15,0	1/1:6,5:11:20.56:128,21,0	1/1:3,6:11:24.61:138,25,0	1/1:8,0:13:14.35:51,14,0	1/1:3,6:9:23.53:147,24,0	1/1:12,7:21:33.31:194,33,0	0/1:10,8:18:12.64:164,0,13	1/1:5,3:8:8.84:58,9,0	1/1:2,1:3:2.95:19,3,0	1/1:5,2:8:8.41:46,8,0	1/1:9,3:13:16.56:90,17,0	1/1:6,7:13:28.80:167,29,0	1/1:10,2:16:2.03:56,2,0	1/1:5,0:15:26.46:88,26,0	1/1:5,0:9:7.88:27,8,0
chr10	15036018	.	AAG	A	618.56	PASS	AB=0.926;AC=19;AF=0.339;AN=56;BaseQRankSum=-1.973;DP=449;FS=4.944;HRun=0;HaplotypeScore=103.2809;InbreedingCoeff=-0.1958;MQ=59.98;MQ0=14;MQRankSum=-4.563;QD=2.03;ReadPosRankSum=1.305;VQSLOD=1.8841;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:30:10.60:0,11,215	0/1:3,2:5:7.05:59,0,7	0/1:57,0:21:6.71:7,0,133	0/1:48,0:12:15.86:16,0,71	0/1:10,1:11:13.48:13,0,90	0/1:14,1:14:42.19:42,0,102	0/0:9,0:9:21.34:0,21,98	0/1:18,3:21:37.05:98,0,37	1/1:13,0:12:7.85:85,8,0	0/1:9,2:11:31.57:75,0,32	0/0:11,0:11:5.29:0,5,58	0/0:9,0:9:13.57:0,14,75	0/1:13,0:13:10.67:11,0,73	0/1:8,0:7:5.41:5,0,15	0/0:7,0:7:5.92:0,6,38	0/0:12,0:12:22.76:0,23,135	0/1:15,1:15:27.76:60,0,28	0/1:14,0:14:1.23:1,0,129	0/0:26,0:26:24.44:0,24,252	0/0:22,0:22:33.13:0,33,282	0/0:5,0:5:12.71:0,13,54	0/0:3,0:3:7.75:0,8,47	0/0:9,0:9:6.93:0,7,87	0/1:10,1:11:16.59:17,0,35	0/1:11,1:12:10.54:11,0,46	0/1:15,2:17:41.75:92,0,42	1/1:19,1:19:8.62:144,9,0	0/1:11,1:10:41.36:41,0,45
chr10	15036035	.	T	TAA	5803.38	PASS	AB=0.981;AC=54;AF=0.964;AN=56;BaseQRankSum=-5.056;DP=444;FS=1.188;HRun=12;HaplotypeScore=92.2610;InbreedingCoeff=0.2242;MQ=66.62;MQ0=13;MQRankSum=-2.630;QD=13.07;ReadPosRankSum=3.598;VQSLOD=3.7152;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:16,13:30:45.04:559,45,0	1/1:4,0:6:5.99:52,6,0	0/1:52,0:21:23.78:24,0,99	0/1:49,0:15:0.13:0,0,128	1/1:6,0:15:27.36:248,27,0	1/1:6,6:18:39.05:437,39,0	1/1:4,1:7:11.52:121,12,0	1/1:9,0:22:32.29:281,32,0	1/1:5,0:13:15.02:142,15,0	1/1:7,0:13:20.39:159,20,0	1/1:8,0:15:19.56:177,20,0	1/1:4,4:8:12.04:163,12,0	1/1:5,6:11:17.97:223,18,0	1/1:4,3:6:6.02:84,6,0	1/1:3,4:7:12.04:166,12,0	1/1:3,8:11:24.08:336,24,0	1/1:4,0:12:18.03:180,18,0	1/1:8,6:14:21.06:277,21,0	1/1:16,5:23:20.02:208,20,0	1/1:8,7:17:37.37:434,37,0	1/1:1,3:4:6.02:84,6,0	1/1:1,2:5:9.40:94,9,0	1/1:3,3:8:12.03:155,12,0	1/1:7,7:15:28.86:341,29,0	1/1:4,6:11:15.04:194,15,0	1/1:10,2:19:32.99:321,33,0	1/1:6,0:13:21.03:200,21,0	1/1:4,0:8:15.02:143,15,0
chr10	15036144	.	TTAAAA	T	2162.83	PASS	AB=0.610;AC=22;AF=0.393;AN=56;BaseQRankSum=-2.093;DP=400;FS=15.082;HRun=0;HaplotypeScore=92.8613;InbreedingCoeff=0.5990;MQ=71.75;MQ0=10;MQRankSum=-2.793;QD=13.03;ReadPosRankSum=0.983;VQSLOD=1.9014;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:27:16.25:135,16,0	0/0:8,0:8:21.31:0,21,180	0/0:45,0:13:32.73:0,33,385	0/0:33,0:19:46.52:0,47,677	0/0:20,0:19:51.08:0,51,675	0/0:13,0:12:27.05:0,27,451	0/0:5,0:5:12.04:0,12,180	0/0:14,0:15:15.56:0,16,258	0/0:8,0:7:17.90:0,18,139	0/0:11,0:11:32.71:0,33,278	0/0:5,0:5:13.97:0,14,121	1/1:0,0:10:0.90:1,1,0	1/1:0,0:4:0.47:1,0,0	1/1:0,0:6:7.11:24,7,0	1/1:0,10:10:15.05:319,15,0	1/1:0,8:8:8.86:146,9,0	0/0:17,0:16:32.96:0,33,321	1/1:5,4:11:30.31:393,30,0	0/1:4,14:16:23.42:429,0,23	0/1:6,12:19:61.41:461,0,61	1/1:0,14:15:17.80:233,18,0	0/1:7,0:11:30.43:30,0,52	0/1:2,0:11:16.18:16,0,19	1/1:7,0:14:25.98:167,26,0	0/0:6,0:12:13.14:0,13,115	0/0:15,0:17:28.18:0,28,329	0/0:17,0:16:45.29:0,45,384	0/0:8,0:8:24.01:0,24,248
chr10	15036145	.	TAAA	T	3019.67	PASS	AB=0.935;AC=41;AF=0.732;AN=56;BaseQRankSum=-6.464;DP=405;FS=0.000;HRun=16;HaplotypeScore=79.9110;InbreedingCoeff=0.2866;MQ=72.48;MQ0=10;MQRankSum=-2.993;QD=10.17;ReadPosRankSum=3.261;VQSLOD=0.1406;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:27:29.77:274,30,0	1/1:2,5:8:17.87:179,18,0	0/0:47,0:13:24.24:0,24,203	0/0:33,0:20:40.72:0,41,414	0/0:10,0:19:11.62:0,12,73	0/1:2,1:12:15.33:15,0,67	0/0:2,0:6:6.73:0,7,33	1/1:5,9:15:23.82:242,24,0	1/1:1,6:6:12.02:129,12,0	1/1:1,10:11:30.06:323,30,0	1/1:3,2:5:2.78:32,3,0	1/1:10,0:10:5.99:50,6,0	1/1:4,0:4:3:25,3,0	1/1:7,0:6:9.02:91,9,0	1/1:10,0:10:14.75:94,15,0	0/1:9,0:9:14.83:26,0,15	1/1:6,11:16:20.88:226,21,0	1/1:11,0:11:14.55:98,15,0	0/1:18,0:16:27.12:56,0,27	0/1:19,0:19:24.16:111,0,24	1/1:15,0:15:11.73:82,12,0	0/1:11,0:11:26.38:41,0,26	0/1:11,0:11:3.98:75,0,4	1/1:14,0:14:20.11:187,20,0	0/1:12,0:12:11.16:11,0,59	1/1:6,11:17:30.10:373,30,0	1/1:7,9:16:32.90:326,33,0	1/1:4,4:8:11.85:129,12,0
chr10	15036147	.	A	AG	100.73	PASS	AB=0.836;AC=4;AF=0.071;AN=56;BaseQRankSum=5.471;DP=414;FS=27.907;HRun=0;HaplotypeScore=84.0970;InbreedingCoeff=0.2617;MQ=75.99;MQ0=10;MQRankSum=-1.731;QD=2.34;ReadPosRankSum=1.019;VQSLOD=0.9258;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:27:63.33:0,63,410	0/0:8,0:8:23.93:0,24,191	0/0:51,0:14:5.67:0,6,150	0/0:36,0:22:19.72:0,20,285	0/0:18,0:17:44.90:0,45,370	0/0:15,0:14:29.93:0,30,247	0/0:6,0:6:14.96:0,15,122	0/0:15,0:15:35.92:0,36,296	0/0:7,0:6:14.98:0,15,124	0/0:11,0:11:32.97:0,33,281	0/0:6,0:6:14.86:0,15,104	0/0:11,0:11:6.07:0,6,28	0/0:5,0:5:2.74:0,3,12	0/0:8,0:7:9.53:0,10,41	0/0:10,0:10:13.68:0,14,63	0/0:9,0:9:11.23:0,11,60	0/0:16,0:15:29.94:0,30,247	0/0:11,0:11:31.17:0,31,188	0/0:18,0:16:43.09:0,43,281	0/1:15,4:19:65.98:66,0,121	0/0:15,0:15:17.29:0,17,106	0/1:9,2:11:15.03:15,0,150	0/0:10,1:11:4.33:0,4,85	0/0:14,0:14:27.02:0,27,183	1/1:7,6:13:6.77:124,7,0	0/0:17,0:17:50.91:0,51,425	0/0:16,0:15:44.95:0,45,385	0/0:9,0:9:24.87:0,25,207
chr10	15036152	.	A	AGGC	348.24	PASS	AB=0.819;AC=4;AF=0.071;AN=56;BaseQRankSum=5.359;DP=439;FS=28.965;HRun=0;HaplotypeScore=103.0026;InbreedingCoeff=-0.0852;MQ=75.00;MQ0=10;MQRankSum=-3.809;QD=6.11;ReadPosRankSum=1.572;VQSLOD=1.0779;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:30:75.23:0,75,1134	0/0:8,0:8:24.08:0,24,321	0/0:54,0:16:42.34:0,42,552	0/0:36,0:22:27.64:0,28,477	0/0:18,0:17:39.12:0,39,557	0/0:18,0:17:36.12:0,36,511	0/0:7,0:7:18.06:0,18,261	0/0:16,0:16:39.12:0,39,526	0/0:7,0:6:15.05:0,15,196	0/0:11,0:11:33.10:0,33,398	0/0:8,0:8:24.04:0,24,357	0/0:10,0:10:9.03:0,9,130	0/0:7,0:7:9.03:0,9,131	0/0:8,0:7:12.04:0,12,149	0/0:11,0:11:18:0,18,207	0/0:11,0:11:15.05:0,15,231	0/0:15,0:14:30.10:0,30,412	0/0:11,0:11:33.11:0,33,495	0/0:22,0:20:48.16:0,48,695	0/1:15,4:19:99:137,0,283	0/0:16,0:16:19.61:0,20,247	0/1:9,2:11:52.34:52,0,390	0/1:14,1:15:35.62:36,0,278	0/0:15,0:15:36.11:0,36,531	0/1:6,6:12:60.45:233,0,60	0/0:18,0:18:51.16:0,51,654	0/0:15,0:14:42.13:0,42,551	0/0:9,0:9:27.05:0,27,352
chr10	15036276	.	T	TAC	231.37	PASS	AB=0.927;AC=12;AF=0.333;AN=36;BaseQRankSum=-2.861;DP=466;FS=1.574;HRun=0;HaplotypeScore=102.6988;InbreedingCoeff=0.2179;MQ=64.68;MQ0=12;MQRankSum=1.343;QD=1.68;ReadPosRankSum=-2.044;VQSLOD=1.7837;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:26:5.81:0,6,49	./.	./.	./.	./.	0/0:10,0:15:5.68:0,6,28	0/0:12,0:15:2.84:0,3,14	./.	0/1:8,0:11:3.73:4,0,19	0/0:15,0:16:2.84:0,3,14	./.	0/1:15,0:15:15.27:15,0,38	1/1:6,5:12:5.92:88,6,0	1/1:14,6:20:9.03:132,9,0	1/1:11,0:14:2.04:6,2,0	./.	./.	0/0:23,0:23:8.42:0,8,60	0/1:18,0:19:2.44:9,0,2	0/0:11,0:15:2.74:0,3,12	0/0:36,0:36:2.84:0,3,14	./.	1/1:12,0:11:2.60:10,3,0	0/1:19,13:33:5.08:79,0,5	0/0:7,0:7:0:0,0,0	0/0:12,0:20:2.84:0,3,14	0/0:5,0:8:5.68:0,6,28	./.
chr10	15036287	.	A	ATTTG	43.23	PASS	AB=0.793;AC=3;AF=0.054;AN=56;BaseQRankSum=3.009;DP=458;FS=12.121;HRun=0;HaplotypeScore=101.5772;InbreedingCoeff=-0.0703;MQ=52.45;MQ0=20;MQRankSum=-4.314;QD=1.35;ReadPosRankSum=-1.748;VQSLOD=0.8184;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:30:72.22:0,72,1439	0/0:7,0:6:12.04:0,12,249	0/0:19,0:11:33.11:0,33,629	0/0:20,0:13:36.12:0,36,694	0/0:13,0:13:18.06:0,18,356	0/0:17,0:15:33.06:0,33,532	0/0:14,0:14:23.97:0,24,347	0/0:13,0:13:36.11:0,36,704	0/0:10,0:10:17.88:0,18,300	0/0:16,0:16:47.64:0,48,834	0/0:10,0:10:9.03:0,9,186	0/0:15,0:15:36.12:0,36,682	0/0:12,0:12:17.94:0,18,322	0/0:20,0:19:35.47:0,35,712	0/0:12,0:11:23.29:0,23,417	0/0:13,0:13:30.10:0,30,621	0/0:15,0:15:15.05:0,15,311	0/0:25,0:23:60.12:0,60,1078	0/0:20,0:20:58.04:0,58,1063	0/0:14,1:14:10.48:0,10,538	0/0:48,0:44:92.85:0,93,1904	0/1:4,4:8:47.42:82,0,47	0/1:11,2:10:30.26:30,0,231	0/0:34,0:33:42.09:0,42,808	0/1:9,2:10:30.26:30,0,207	0/0:18,0:16:42.13:0,42,807	0/0:7,0:7:15.03:0,15,215	0/0:1,0:1:3:0,3,29
chr10	15036315	.	A	ATTTG	281.21	PASS	AB=0.853;AC=6;AF=0.107;AN=56;BaseQRankSum=1.837;DP=479;FS=46.631;HRun=0;HaplotypeScore=107.6896;InbreedingCoeff=0.1894;MQ=54.57;MQ0=17;MQRankSum=-4.278;QD=4.26;ReadPosRankSum=-1.683;VQSLOD=0.2352;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:26:57.20:0,57,1183	0/0:5,0:4:6.02:0,6,125	0/0:19,0:5:14.94:0,15,254	0/0:28,0:22:60.49:0,60,1083	0/0:11,0:11:8.99:0,9,145	0/0:16,0:15:15.05:0,15,254	0/0:18,0:18:36.08:0,36,676	0/0:17,0:17:51.17:0,51,1040	0/0:9,0:9:14.87:0,15,244	0/0:9,0:9:27.05:0,27,446	0/0:4,0:4:3.01:0,3,62	0/0:14,0:14:23.87:0,24,419	0/0:13,0:13:23.96:0,24,453	0/0:20,0:19:36.12:0,36,712	0/0:13,0:13:18.06:0,18,329	0/0:17,0:17:36.12:0,36,729	0/0:20,0:20:33.11:0,33,636	0/1:28,1:28:8.95:9,0,1183	0/0:17,0:17:29.85:0,30,842	0/1:8,2:10:54.01:54,0,238	0/0:59,0:55:99:0,110,2209	1/1:2,4:6:12.04:150,12,0	0/1:7,1:5:31.46:31,0,57	0/0:38,0:37:45.10:0,45,886	0/1:8,5:12:99:161,0,211	0/0:18,0:15:27.09:0,27,527	0/0:13,0:13:27.09:0,27,499	0/0:7,0:7:21.07:0,21,435
chr10	15037443	.	T	TA	778.22	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-3.715;DP=379;FS=0.699;HRun=11;HaplotypeScore=36.5606;InbreedingCoeff=0.7288;MQ=56.64;MQ0=7;MQRankSum=0.119;QD=17.29;ReadPosRankSum=1.650;VQSLOD=4.0166;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:29:50.59:0,51,390	0/0:9,0:9:21.39:0,21,163	0/0:9,0:3:8.96:0,9,69	0/0:10,0:4:5.23:0,5,64	1/1:4,13:17:5.06:299,5,0	1/1:3,16:20:45.09:457,45,0	1/1:2,6:8:15.03:152,15,0	0/0:32,0:30:57.60:0,58,562	0/0:6,0:6:14.92:0,15,116	0/0:10,0:10:26.89:0,27,208	0/0:9,0:10:22.95:0,23,168	0/0:4,0:4:11.95:0,12,93	0/0:6,0:6:14.93:0,15,115	0/0:9,0:9:20.87:0,21,156	0/0:6,0:6:17.93:0,18,137	0/0:9,0:9:26.90:0,27,209	0/0:29,1:29:44.21:0,44,519	0/0:22,0:23:52.84:0,53,400	0/0:12,1:13:1.51:0,2,184	0/0:15,0:15:38.84:0,39,300	0/0:13,0:13:23.89:0,24,186	0/0:5,0:5:8.95:0,9,67	0/0:14,1:14:2.39:0,2,198	0/0:13,0:13:38.83:0,39,299	0/0:16,0:16:38.82:0,39,299	0/0:20,0:20:49.82:0,50,373	0/0:6,0:7:16.98:0,17,122	0/0:13,0:13:28.88:0,29,215
chr10	15037565	.	AAGCCCCGTTCAGACCT	A	5658.36	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=9.202;DP=368;FS=2.931;HRun=0;HaplotypeScore=178.6204;InbreedingCoeff=0.9022;MQ=91.37;MQ0=0;MQRankSum=-8.846;QD=115.48;ReadPosRankSum=2.753;VQSLOD=4.8190;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:96.33:0,96,7373	0/0:5,0:5:15.05:0,15,958	0/0:19,0:19:57.20:0,57,2826	0/0:14,0:14:42.14:0,42,2302	0/0:9,0:8:21.07:0,21,1276	0/0:24,0:24:69.24:0,69,4501	0/0:24,0:24:72.23:0,72,4480	0/0:18,0:18:54.18:0,54,3248	0/0:14,0:14:42.14:0,42,2733	0/0:8,0:8:24.08:0,24,1641	0/0:1,0:1:3.01:0,3,64	0/0:12,0:12:36.11:0,36,2674	0/0:12,0:12:36.12:0,36,2787	0/0:16,0:16:48.16:0,48,3340	1/1:0,8:8:18.06:880,18,0	1/1:0,6:6:12.04:587,12,0	0/0:39,0:39:99:0,114,7516	1/1:0,11:11:30.10:1467,30,0	1/1:0,12:12:36.10:1506,36,0	1/1:0,3:3:9.03:347,9,0	1/1:0,9:9:18.06:872,18,0	0/0:10,0:10:24.08:0,24,1843	0/0:3,0:3:9.03:0,9,633	0/0:21,0:21:63.22:0,63,4872	0/0:4,0:4:12.04:0,12,795	0/0:18,0:18:54.19:0,54,3301	0/0:14,0:13:36.12:0,36,2417	0/0:2,0:2:6.02:0,6,428
chr10	15037919	.	A	ATC	8673.58	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-17.432;DP=682;FS=5.070;HRun=0;HaplotypeScore=77.1713;InbreedingCoeff=0.9991;MQ=86.22;MQ0=0;MQRankSum=-2.690;QD=40.91;ReadPosRankSum=4.636;VQSLOD=6.9944;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,44:45:99:2128,120,0	0/0:10,0:10:24.08:0,24,325	0/0:24,0:24:66.18:0,66,857	0/0:21,0:21:48.10:0,48,611	0/0:24,0:24:72.20:0,72,947	0/0:27,0:27:75.23:0,75,1013	0/0:22,0:22:64.76:0,65,870	0/0:23,0:23:63.18:0,63,821	0/0:34,0:34:99:0,99,1306	0/0:32,0:32:84.26:0,84,1124	0/0:18,0:18:47.90:0,48,594	1/1:0,21:21:51.17:905,51,0	1/1:1,21:22:57.20:1010,57,0	1/1:6,23:29:45.15:798,45,0	0/0:28,0:28:78.23:0,78,1038	0/0:19,0:19:54.11:0,54,718	0/0:41,0:41:99:0,108,1429	0/0:17,0:17:45.12:0,45,596	0/0:18,0:18:54.15:0,54,693	0/0:16,0:16:42.06:0,42,536	0/0:41,0:41:99:0,123,1624	1/1:1,24:25:51.17:904,51,0	1/1:2,12:14:27.09:479,27,0	1/1:1,35:36:93.32:1650,93,0	1/1:3,17:20:45.15:798,45,0	0/0:22,0:22:63.19:0,63,837	0/0:25,0:25:66.05:0,66,845	0/0:8,0:8:24.08:0,24,329
chr10	15038377	.	GCACACACA	G	3941.24	PASS	AB=0.804;AC=33;AF=0.660;AN=50;BaseQRankSum=3.902;DP=632;FS=2.844;HRun=0;HaplotypeScore=183.8930;InbreedingCoeff=0.5196;MQ=73.87;MQ0=17;MQRankSum=-7.536;QD=10.54;ReadPosRankSum=1.888;VQSLOD=2.6760;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	1/1:6,0:6:8.81:95,9,0	./.	./.	0/0:26,0:26:38.48:0,38,972	0/0:25,0:25:42.62:0,43,1254	0/0:40,0:39:45.63:0,46,1368	0/1:20,0:19:0.61:1,0,25	1/1:16,0:23:15.04:251,15,0	1/1:8,0:13:6.02:100,6,0	0/1:11,0:16:0:0,0,0	1/1:13,15:29:30.10:726,30,0	1/1:13,13:27:21.03:448,21,0	1/1:9,12:21:8.68:223,9,0	0/1:11,1:22:60.42:60,0,164	0/1:16,0:27:99:115,0,168	1/1:16,0:24:5.76:111,6,0	0/0:12,0:21:27.44:0,27,256	0/1:13,0:12:57.77:58,0,90	0/0:6,0:10:1.84:0,2,113	0/0:40,0:39:9:0,9,99	1/1:9,8:18:12.04:279,12,0	1/1:14,0:16:12.02:173,12,0	1/1:24,11:37:21.28:429,21,0	1/1:8,7:18:9.03:205,9,0	1/1:13,0:18:8.36:140,8,0	1/1:11,0:17:21.53:360,22,0	1/1:1,0:5:9.03:167,9,0
chr10	15038944	.	CATACAT	C	2019.76	PASS	AB=0.985;AC=34;AF=0.607;AN=56;BaseQRankSum=3.333;DP=434;FS=6.771;HRun=0;HaplotypeScore=93.2822;InbreedingCoeff=-0.1236;MQ=52.99;MQ0=15;MQRankSum=-1.652;QD=5.32;ReadPosRankSum=2.008;VQSLOD=0.7098;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:3,21:24:3.01:72,3,0	1/1:7,0:7:3.01:43,3,0	0/0:15,0:6:16.60:0,17,272	0/0:8,0:5:11.87:0,12,176	0/1:22,0:21:2.25:2,0,150	0/1:15,0:16:13.40:13,0,261	0/1:23,0:22:37.61:38,0,111	0/1:15,0:14:36.64:43,0,37	0/0:14,0:13:0.44:0,0,6	0/1:10,0:9:16.15:16,0,40	0/1:18,0:18:40.96:49,0,41	1/1:10,0:9:24.07:371,24,0	1/1:2,10:12:4.62:90,5,0	1/1:11,0:10:21.06:318,21,0	1/1:12,0:12:9:84,9,0	0/1:11,0:11:13.27:142,0,13	0/1:26,0:25:43.94:106,0,44	0/1:23,0:23:53.83:54,0,58	0/1:13,0:12:19.82:20,0,50	0/1:15,0:15:45.22:47,0,45	1/1:18,0:17:5.59:21,6,0	1/1:1,12:13:5.99:91,6,0	0/1:8,0:9:3.48:26,0,3	0/1:17,0:17:72.74:73,0,92	1/1:2,13:13:3.01:72,3,0	0/0:17,0:16:9.36:0,9,57	0/1:22,0:22:0.44:220,0,0	1/1:17,0:15:15.03:171,15,0
chr10	15038946	.	TACATACAC	T	4072.92	PASS	AB=0.883;AC=41;AF=0.732;AN=56;BaseQRankSum=-3.015;DP=436;FS=1.504;HRun=0;HaplotypeScore=94.6169;InbreedingCoeff=0.1722;MQ=52.54;MQ0=16;MQRankSum=-0.645;QD=10.66;ReadPosRankSum=3.208;VQSLOD=1.9543;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:25:6.31:6,0,19	1/1:0,7:7:2.79:82,3,0	0/0:15,0:6:2.81:0,3,110	0/0:8,0:5:8.95:0,9,74	0/1:24,0:23:99:155,0,159	0/1:17,0:17:99:111,0,298	0/1:22,0:21:99:208,0,118	1/1:15,0:13:23.61:208,24,0	1/1:14,0:13:26.65:210,27,0	1/1:9,0:8:8.67:84,9,0	1/1:2,0:19:3:25,3,0	0/0:11,0:10:0.23:0,0,38	1/1:12,0:12:5.21:38,5,0	1/1:10,0:9:17.97:148,18,0	1/1:0,0:12:9.03:174,9,0	1/1:1,0:11:17.65:324,18,0	1/1:5,18:23:11.37:303,11,0	0/1:3,1:21:60.47:140,0,60	1/1:13,0:12:13.08:168,13,0	0/1:7,0:16:8.85:113,0,9	1/1:18,0:17:26.96:254,27,0	1/1:13,0:13:5.50:38,6,0	0/1:10,0:10:5.96:6,0,113	0/0:20,0:19:16.67:0,17,620	1/1:15,0:13:2.80:13,3,0	1/1:16,0:15:34.67:336,35,0	1/1:3,15:21:18.37:524,18,0	1/1:5,13:16:2.84:404,3,0
chr10	15038948	.	CAT	C	3037.97	PASS	AB=0.993;AC=44;AF=0.786;AN=56;BaseQRankSum=-1.475;DP=441;FS=1.899;HRun=0;HaplotypeScore=73.4745;InbreedingCoeff=0.0151;MQ=52.12;MQ0=18;MQRankSum=-0.928;QD=7.27;ReadPosRankSum=4.416;VQSLOD=2.8254;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:25:3.48:36,3,0	1/1:7,0:7:2.98:22,3,0	0/0:15,0:6:2.81:0,3,110	0/0:8,0:5:8.95:0,9,74	1/1:24,0:23:30.94:237,31,0	0/1:17,1:18:8.76:180,0,9	1/1:21,1:21:4.05:298,4,0	1/1:16,0:13:23.77:208,24,0	0/1:15,0:14:5.40:168,0,5	1/1:10,0:9:17.84:149,18,0	1/1:19,0:19:2.99:24,3,0	1/1:7,3:9:21:214,21,0	0/1:12,0:12:15.48:15,0,26	1/1:10,1:10:20.97:172,21,0	1/1:12,0:12:8.84:57,9,0	0/1:11,0:11:14.06:90,0,14	1/1:24,0:23:9.69:89,10,0	0/1:23,0:22:35.37:35,0,38	1/1:3,10:12:29.58:226,30,0	0/1:15,0:15:23.25:33,0,23	0/1:19,0:18:3.87:151,0,4	0/1:14,0:14:11.66:12,0,46	1/1:10,0:10:8.77:54,9,0	1/1:19,0:18:5.64:142,6,0	1/1:15,0:13:3.01:34,3,0	1/1:16,0:15:11.92:260,12,0	1/1:20,0:20:20.88:161,21,0	1/1:18,0:16:14.93:116,15,0
chr10	15041700	.	T	TA	8392.50	PASS	AB=0.589;AC=50;AF=0.893;AN=56;BaseQRankSum=-4.781;DP=541;FS=3.943;HRun=11;HaplotypeScore=77.5336;InbreedingCoeff=0.5900;MQ=78.71;MQ0=0;MQRankSum=-5.228;QD=16.55;ReadPosRankSum=0.488;VQSLOD=5.7054;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,33:36:75.29:730,75,0	1/1:2,2:4:6.01:61,6,0	0/0:15,0:16:12.90:0,13,149	0/0:17,0:18:18.86:0,19,109	1/1:9,0:14:17.94:103,18,0	1/1:5,0:10:10.34:48,10,0	1/1:8,0:28:59.81:305,60,0	1/1:5,21:26:39.86:571,40,0	1/1:4,13:17:51.07:500,51,0	1/1:5,18:24:54.02:506,54,0	1/1:2,9:11:20.96:199,21,0	1/1:2,19:21:38.90:396,39,0	1/1:4,7:11:29.88:282,30,0	1/1:3,14:17:12.66:295,13,0	1/1:4,1:24:47:256,47,0	1/1:3,0:17:36.96:186,37,0	1/1:3,34:37:72.14:731,72,0	1/1:5,0:26:52.16:266,52,0	1/1:5,0:23:48.99:280,49,0	1/1:1,1:15:32.49:190,32,0	1/1:4,2:16:14.68:72,15,0	1/1:2,9:11:15.50:153,16,0	1/1:5,12:19:18.88:174,19,0	1/1:5,30:35:87.17:883,87,0	0/1:5,7:13:19.30:170,0,19	1/1:3,16:19:21.81:381,22,0	0/1:4,15:18:4.41:311,0,4	1/1:3,11:14:23.38:343,23,0
chr10	15042338	.	CCAGTCTT	C	8751.27	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=15.156;DP=629;FS=7.624;HRun=0;HaplotypeScore=150.4404;InbreedingCoeff=0.9807;MQ=83.86;MQ0=0;MQRankSum=-15.737;QD=56.46;ReadPosRankSum=1.814;VQSLOD=4.1455;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,123,4875	1/1:2,5:7:9.03:237,9,0	0/0:22,0:22:54.17:0,54,1846	0/0:23,0:23:63.22:0,63,2345	0/0:24,0:24:72.25:0,72,2756	0/0:21,0:21:60.21:0,60,2413	0/0:32,0:32:96.33:0,96,3877	1/1:6,18:24:54.19:1423,54,0	1/1:2,17:19:42.14:1104,42,0	1/1:1,20:21:60.21:1550,60,0	1/1:2,10:12:21.07:553,21,0	0/0:26,0:26:72.25:0,72,2848	0/0:19,0:19:54.19:0,54,2103	0/0:25,0:25:69.22:0,69,2607	0/0:18,0:18:51.18:0,51,2060	0/0:25,0:25:72.23:0,72,2735	1/1:4,20:24:36.08:890,36,0	0/0:19,0:19:57.15:0,57,2173	0/0:27,0:27:81.28:0,81,3056	0/0:18,0:18:54.14:0,54,2079	0/0:59,0:59:99:0,172,6839	0/0:15,0:15:42.13:0,42,1600	0/0:13,0:13:36.12:0,36,1384	0/0:32,0:32:93.32:0,93,3744	0/0:14,0:14:42.14:0,42,1695	1/1:1,28:28:84.28:2125,84,0	1/1:4,10:14:24.08:633,24,0	1/1:2,3:5:9.03:237,9,0
chr10	15042760	.	ATCT	A	5882.49	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=10.088;DP=515;FS=2.258;HRun=0;HaplotypeScore=106.4685;InbreedingCoeff=0.9912;MQ=88.02;MQ0=0;MQRankSum=-6.012;QD=41.43;ReadPosRankSum=0.609;VQSLOD=6.0933;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,20:21:37.07:600,37,0	0/0:5,0:5:15.05:0,15,338	0/0:31,0:31:68.91:0,69,1699	0/0:18,0:18:51.17:0,51,1099	0/0:5,0:5:15.05:0,15,340	0/0:20,0:20:60.17:0,60,1300	0/0:23,0:23:69.19:0,69,1494	0/0:22,0:22:57.19:0,57,1252	0/0:22,0:22:63.16:0,63,1336	0/0:13,0:13:39.13:0,39,883	0/0:9,0:9:27.09:0,27,611	1/1:1,27:28:81.28:1346,81,0	1/1:0,9:9:24.08:398,24,0	1/1:1,27:28:78.27:1297,78,0	0/0:21,0:21:60.21:0,60,1360	0/0:20,0:20:57.20:0,57,1292	0/0:31,0:31:93.32:0,93,2105	0/0:13,0:13:33.11:0,33,747	0/0:13,0:13:39.12:0,39,842	0/0:9,0:9:27.09:0,27,612	0/0:44,0:44:99:0,126,2832	1/1:1,12:13:33.11:547,33,0	1/1:1,7:8:15.05:250,15,0	1/1:0,20:20:47.74:797,48,0	1/1:2,13:15:39.13:649,39,0	0/0:13,0:12:36.12:0,36,813	0/0:20,0:20:60.21:0,60,1357	0/0:21,0:21:60.19:0,60,1265
chr10	15042837	.	TCTCTCTCTCACTCACTCTC	T	2094.63	PASS	AB=0.984;AC=15;AF=0.268;AN=56;BaseQRankSum=6.414;DP=419;FS=18.710;HRun=0;HaplotypeScore=197.6510;InbreedingCoeff=0.1636;MQ=45.19;MQ0=21;MQRankSum=-4.394;QD=12.93;ReadPosRankSum=2.546;VQSLOD=1.6077;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:13,2:14:3.58:282,4,0	0/0:6,0:6:6.22:0,6,218	0/0:16,0:1:3.01:0,3,58	0/0:38,0:9:15.76:0,16,194	0/1:10,0:10:64.88:116,0,65	0/1:17,0:16:30.25:30,0,141	0/0:16,0:16:2.75:0,3,125	0/0:25,0:22:51.09:0,51,666	0/0:14,0:14:9.16:0,9,143	0/0:12,0:12:23.90:0,24,490	0/0:8,0:7:3.47:0,3,25	0/1:20,4:24:23.71:553,0,24	0/1:13,0:13:43.25:105,0,43	1/1:22,1:21:15.46:438,15,0	0/0:10,0:9:9.03:0,9,177	0/0:8,0:7:7.82:0,8,143	0/0:27,0:27:59.89:0,60,1607	0/0:13,0:13:32.03:0,32,710	0/0:11,0:11:26.95:0,27,403	0/1:6,0:6:0.21:0,0,0	0/0:30,0:30:32.79:0,33,721	1/1:12,0:12:5.62:400,6,0	0/1:9,0:9:0.11:10,0,0	0/1:13,0:13:9.64:29,0,10	0/1:13,0:13:14.36:276,0,14	0/0:16,0:15:37.64:0,38,911	0/0:7,0:7:14.92:0,15,408	0/1:7,0:7:9.43:9,0,411
chr10	15042845	.	TCA	T	2172.47	PASS	AB=0.931;AC=39;AF=0.750;AN=52;BaseQRankSum=-2.640;DP=391;FS=4.365;HRun=0;HaplotypeScore=111.4789;InbreedingCoeff=0.0404;MQ=48.82;MQ0=17;MQRankSum=1.158;QD=6.60;ReadPosRankSum=0.665;VQSLOD=2.6666;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:15,0:14:3.07:3,0,45	1/1:6,0:6:5.17:30,5,0	0/1:24,0:8:9.83:10,0,100	0/0:36,0:7:7.55:0,8,73	1/1:10,0:10:0.41:131,0,0	1/1:15,0:14:7.09:137,7,0	0/1:6,13:19:38.34:38,0,52	1/1:24,0:21:47.91:274,48,0	1/1:13,1:14:7.39:107,7,0	1/1:0,0:9:20.42:139,20,0	./.	0/1:21,0:21:34.80:69,0,35	0/1:11,0:11:3.30:45,0,3	1/1:23,0:22:14.54:79,15,0	0/1:9,1:9:1.54:20,0,2	1/1:3,5:7:5.88:36,6,0	1/1:23,0:23:12.48:224,12,0	1/1:15,1:16:21.36:290,21,0	1/1:4,1:5:5.05:51,5,0	1/1:8,0:8:3:26,3,0	1/1:20,1:21:21.85:219,22,0	0/1:10,0:10:7.56:8,0,25	./.	0/0:12,0:12:3.60:0,4,18	0/1:10,0:10:11.10:20,0,11	1/1:15,0:15:31.59:224,32,0	1/1:5,0:5:11.82:82,12,0	0/1:6,1:7:7.30:53,0,7
chr10	15042847	.	ACTCACT	A	3576.65	PASS	AB=1.000;AC=33;AF=0.589;AN=56;BaseQRankSum=-4.828;DP=395;FS=0.614;HRun=0;HaplotypeScore=123.6752;InbreedingCoeff=-0.0569;MQ=50.34;MQ0=17;MQRankSum=0.500;QD=11.84;ReadPosRankSum=2.708;VQSLOD=2.8269;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:15,0:14:37.89:38,0,40	0/1:6,0:6:4.21:33,0,4	0/0:28,0:11:22.99:0,23,270	0/0:39,0:7:9.49:0,9,183	0/1:10,0:10:9.55:64,0,10	0/1:15,0:14:3.95:87,0,4	1/1:19,0:19:1.51:5,2,0	1/1:7,16:20:49.47:637,49,0	1/1:14,0:14:5.50:244,6,0	1/1:9,0:9:20.03:205,20,0	0/0:1,4:4:0:0,0,0	0/1:21,0:21:99:133,0,100	0/1:10,0:10:2.08:70,0,2	1/1:24,0:23:9.50:181,9,0	1/1:11,0:10:6.01:87,6,0	1/1:9,0:8:9.03:143,9,0	0/1:22,0:22:38.61:301,0,39	0/1:18,0:18:2.87:343,0,3	1/1:4,1:5:5.97:66,6,0	1/1:7,0:7:2.74:61,3,0	1/1:22,0:22:6.08:184,6,0	0/1:10,0:10:41.73:59,0,42	0/0:10,0:10:3.17:0,3,8	0/0:11,0:11:5.67:0,6,30	0/1:9,0:9:15.06:57,0,15	0/1:13,0:13:12.54:486,0,13	0/1:3,0:3:8.53:9,0,37	0/1:7,0:7:57.09:84,0,57
chr10	15042851	.	ACT	A	1700.53	PASS	AB=0.967;AC=33;AF=0.635;AN=52;BaseQRankSum=-3.168;DP=397;FS=11.647;HRun=0;HaplotypeScore=117.2875;InbreedingCoeff=0.1401;MQ=55.94;MQ0=17;MQRankSum=1.783;QD=5.99;ReadPosRankSum=4.126;VQSLOD=2.5685;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:16,0:15:8.32:20,0,8	1/1:3,4:7:8.44:78,8,0	0/0:32,0:12:20.37:0,20,215	0/0:46,0:10:6.79:0,7,123	0/1:11,0:11:2.59:3,0,29	0/1:12,0:11:1.37:1,0,18	./.	1/1:20,1:19:33.02:346,33,0	1/1:14,1:15:14.23:164,14,0	1/1:9,0:9:8.04:104,8,0	./.	0/1:21,0:21:15.22:15,0,20	0/1:9,0:9:9.56:10,0,11	0/1:24,0:23:5.42:33,0,5	1/1:4,8:11:3.01:36,3,0	1/1:9,1:9:12.01:117,12,0	1/1:18,1:19:8.38:184,8,0	1/1:16,0:16:16.78:152,17,0	0/1:4,0:4:5.06:13,0,5	1/1:2,3:5:3.01:36,3,0	0/1:10,14:24:5.51:63,0,6	0/1:10,0:10:10.34:13,0,10	0/0:9,0:9:2.76:0,3,7	0/1:12,0:12:0.73:1,0,4	0/1:7,0:7:5.20:19,0,5	1/1:8,4:12:28.17:350,28,0	0/0:3,0:3:1.25:0,1,3	1/1:8,0:8:12.78:93,13,0
chr10	15042858	.	CTCTCTCTCTCTCACT	C	2105.80	PASS	AB=0.887;AC=10;AF=0.192;AN=52;BaseQRankSum=8.494;DP=397;FS=30.781;HRun=0;HaplotypeScore=166.8487;InbreedingCoeff=-0.2442;MQ=61.58;MQ0=20;MQRankSum=-7.051;QD=19.14;ReadPosRankSum=1.003;VQSLOD=1.2322;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:9,1:9:75:222,0,75	0/0:8,0:8:8.99:0,9,344	0/0:43,0:19:48.06:0,48,984	0/0:55,0:13:22.80:0,23,520	0/1:9,0:9:53.08:53,0,446	0/1:14,0:13:2.02:2,0,387	./.	0/0:21,0:19:45.26:0,45,670	0/0:15,0:15:24.50:0,24,423	0/0:11,0:11:25.02:0,25,630	./.	0/1:16,0:16:18.02:492,0,18	0/1:4,1:5:33.56:150,0,34	0/1:20,3:22:99:583,0,211	0/0:11,0:11:5.34:0,5,135	0/0:9,0:8:9.69:0,10,253	0/0:21,0:21:47.51:0,48,1602	0/0:16,0:16:41.19:0,41,957	0/0:5,0:5:14.99:0,15,272	0/0:6,0:6:6.02:0,6,156	0/0:25,0:25:30.05:0,30,634	0/1:4,4:8:23.68:346,0,24	0/1:9,0:9:25.96:26,0,224	0/1:9,1:10:35.20:35,0,36	0/1:3,2:6:46.95:332,0,47	0/0:14,0:14:42.14:0,42,1208	0/0:5,0:5:15.05:0,15,533	0/0:5,0:5:15.04:0,15,438
chr10	15042876	.	C	CCT	2589	PASS	AB=0.676;AC=10;AF=0.179;AN=56;BaseQRankSum=5.841;DP=476;FS=16.239;HRun=0;HaplotypeScore=125.4086;InbreedingCoeff=0.1819;MQ=67.47;MQ0=12;MQRankSum=-7.944;QD=21.58;ReadPosRankSum=0.831;VQSLOD=2.9823;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:8,3:13:41.07:232,0,41	0/0:11,0:11:21.03:0,21,308	0/0:46,0:21:35.42:0,35,521	0/0:73,0:25:41.38:0,41,540	0/0:10,0:10:22.95:0,23,349	0/0:15,0:15:35.69:0,36,419	0/0:20,0:20:29.96:0,30,404	0/0:20,0:20:54.11:0,54,773	0/0:12,0:12:21.41:0,21,343	0/0:10,0:10:27.09:0,27,440	0/0:9,0:9:18:0,18,272	1/1:12,10:24:14.53:858,15,0	0/1:2,5:10:42.59:118,0,43	0/1:14,8:27:99:699,0,129	0/0:14,0:13:12.02:0,12,170	0/0:10,0:10:20.60:0,21,249	0/0:18,0:18:48.11:0,48,751	0/0:15,0:15:36.02:0,36,522	0/0:10,0:10:24.27:0,24,319	0/0:7,0:7:12.03:0,12,172	0/0:21,0:21:26.03:0,26,390	1/1:1,6:12:2.14:282,2,0	0/1:8,4:12:99:196,0,109	0/1:9,2:14:30.36:168,0,30	0/1:3,2:8:32.06:185,0,32	0/0:15,0:15:45.14:0,45,699	0/0:8,0:8:24.06:0,24,366	0/0:8,0:8:18.06:0,18,279
chr10	15043748	.	GA	G	7129.81	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=12.157;DP=605;FS=4.931;HRun=2;HaplotypeScore=64.6211;InbreedingCoeff=0.9996;MQ=90.93;MQ0=0;MQRankSum=-1.930;QD=36.75;ReadPosRankSum=0.274;VQSLOD=5.3800;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:96.30:0,96,1394	1/1:0,9:9:27.09:351,27,0	0/0:27,0:27:49.36:0,49,740	0/0:29,0:28:77.07:0,77,1013	0/0:10,0:10:30.10:0,30,450	0/0:22,0:22:63.21:0,63,943	0/0:26,0:26:75.22:0,75,1080	1/1:0,26:26:78.24:995,78,0	1/1:0,21:21:60.20:779,60,0	1/1:1,34:35:99:1286,99,0	1/1:1,11:12:33.11:428,33,0	0/0:27,0:27:81.26:0,81,1192	0/0:18,0:18:54.17:0,54,788	0/0:22,0:22:63.21:0,63,943	0/0:24,0:24:72.24:0,72,1078	0/0:20,0:20:60.18:0,60,859	1/1:0,26:26:69.22:892,69,0	0/0:19,0:19:57.17:0,57,832	0/0:13,0:13:39.13:0,39,585	0/0:19,0:19:57.19:0,57,854	0/0:33,0:33:93.30:0,93,1372	0/0:21,0:21:60.20:0,60,899	0/0:15,0:15:45.15:0,45,672	0/0:17,0:17:51.17:0,51,764	0/0:17,0:17:51.17:0,51,762	1/1:0,30:30:90.28:1153,90,0	1/1:1,24:25:66.21:857,66,0	1/1:0,10:10:30.10:390,30,0
chr10	15044159	.	AAAAGAAAGAAAGAAAGAAAGAAAG	A	2404.40	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=5.374;DP=562;FS=25.647;HRun=0;HaplotypeScore=316.5176;InbreedingCoeff=0.8280;MQ=59.39;MQ0=3;MQRankSum=-3.284;QD=25.05;ReadPosRankSum=1.791;VQSLOD=0.8318;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:78.26:0,78,6940	0/0:10,0:10:15.05:0,15,1077	0/0:12,0:8:3:0,3,27	0/0:7,0:6:3.01:0,3,31	0/0:28,0:28:48.14:0,48,2460	0/0:17,0:17:27.07:0,27,1799	0/0:24,0:23:33.09:0,33,2075	0/0:21,0:21:20.55:0,21,541	0/0:21,0:21:24.07:0,24,1072	0/0:25,0:25:60.20:0,60,4877	0/0:17,0:17:33.11:0,33,1921	0/0:23,0:23:54.18:0,54,5004	0/0:15,0:15:30.10:0,30,2333	0/0:25,0:25:48.16:0,48,4285	1/1:7,7:14:9.03:554,9,0	1/1:6,9:15:9.03:562,9,0	0/0:22,0:25:39.09:0,39,2519	1/1:9,16:25:6.02:354,6,0	1/1:12,6:18:17.86:587,18,0	1/1:5,11:16:8.99:347,9,0	1/1:2,6:8:3.01:163,3,0	0/0:19,0:19:42.13:0,42,2715	0/0:13,0:19:36.12:0,36,2393	0/0:18,0:39:60.20:0,60,4402	0/0:24,0:24:48.16:0,48,4944	0/0:26,0:26:39.60:0,40,3033	0/0:17,0:17:39.13:0,39,2790	0/0:11,0:10:21.02:0,21,1146
chr10	15044209	.	A	AAGAAAGACAGAC	7007.46	PASS	AB=0.821;AC=19;AF=0.339;AN=56;BaseQRankSum=-9.306;DP=703;FS=12.138;HRun=0;HaplotypeScore=244.7970;InbreedingCoeff=0.5849;MQ=59.34;MQ0=8;MQRankSum=-1.771;QD=22.68;ReadPosRankSum=-2.372;VQSLOD=2.3535;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:44:19.63:0,20,2044	0/1:2,0:11:12.87:324,0,13	0/0:16,0:12:33.10:0,33,558	0/0:14,0:10:24.03:0,24,460	0/0:3,0:20:24.23:0,24,83	0/0:6,0:19:13.97:0,14,92	0/1:28,0:27:56.45:71,0,56	1/1:28,0:23:52.37:763,52,0	1/1:2,18:21:5.98:199,6,0	1/1:39,0:39:99:1375,102,0	1/1:2,16:24:41.79:803,42,0	0/0:31,0:31:27.89:0,28,1519	0/0:19,0:19:30.96:0,31,951	0/0:29,0:29:35.28:0,35,1644	0/0:16,0:16:20.65:0,21,464	0/0:20,0:20:32.71:0,33,591	1/1:26,0:26:63.57:932,64,0	0/0:32,0:32:47.08:0,47,745	0/0:29,0:28:50.73:0,51,753	0/0:21,0:21:34.26:0,34,464	0/0:16,0:16:25.78:0,26,383	0/0:2,0:25:65.90:0,66,1053	0/1:18,0:18:2.22:2,0,442	0/0:43,0:43:71.89:0,72,1012	0/1:25,0:26:9.76:10,0,1203	1/1:3,32:41:78.86:2158,79,0	0/1:5,0:26:77.91:264,0,78	1/1:4,0:20:3.01:107,3,0
chr10	15044723	.	TTCTCTCTCTCTCTCTCTCTCTC	T	1467.85	PASS	AB=1.000;AC=11;AF=0.250;AN=44;BaseQRankSum=4.929;DP=502;FS=8.033;HRun=0;HaplotypeScore=227.9988;InbreedingCoeff=0.5325;MQ=75.51;MQ0=26;MQRankSum=-1.615;QD=12.88;ReadPosRankSum=1.970;VQSLOD=1.5114;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:3.01:0,3,227	./.	0/1:49,0:20:1.26:1,0,46	0/0:67,0:29:1.79:0,2,86	0/0:9,0:10:3.01:0,3,208	0/0:14,0:14:6.02:0,6,217	0/0:23,0:22:21.05:0,21,636	0/0:20,0:19:2.37:0,2,8	1/1:12,1:14:13.86:487,14,0	1/1:14,0:13:3.01:56,3,0	1/1:8,0:7:3.01:36,3,0	0/0:18,0:19:27.09:0,27,1927	0/0:11,0:11:18.06:0,18,1069	0/0:11,0:11:3.01:0,3,125	0/0:16,0:16:12.04:0,12,573	0/0:7,0:7:3.01:0,3,76	1/1:10,8:19:9.03:500,9,0	0/0:27,0:27:26.12:0,26,1872	0/0:23,0:23:26.12:0,26,1166	0/0:12,0:12:4.26:0,4,246	0/0:30,0:27:12.91:0,13,697	./.	./.	0/0:24,0:26:21.05:0,21,1281	./.	./.	1/1:7,3:10:9.03:520,9,0	./.
chr10	15045051	.	CGGTGAT	C	6463.90	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=7.130;DP=621;FS=7.820;HRun=0;HaplotypeScore=144.5126;InbreedingCoeff=0.9959;MQ=78.82;MQ0=0;MQRankSum=-11.851;QD=48.97;ReadPosRankSum=-0.380;VQSLOD=4.5937;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,135,4572	0/0:7,0:7:15.05:0,15,474	0/0:18,0:18:51.17:0,51,1604	0/0:16,0:16:23.75:0,24,1072	0/0:22,0:22:51.18:0,51,1754	0/0:26,0:26:75.24:0,75,2516	0/0:23,0:23:63.22:0,63,2071	0/0:38,0:38:99:0,105,3591	0/0:26,0:26:63.22:0,63,2130	0/0:21,0:21:57.20:0,57,1989	0/0:20,0:20:51.18:0,51,1775	0/0:26,0:26:78.27:0,78,2595	0/0:16,0:16:45.15:0,45,1543	0/0:14,0:14:39.13:0,39,1329	1/1:1,20:21:45.15:1034,45,0	1/1:1,19:20:48.16:1103,48,0	0/0:23,0:23:57.17:0,57,1860	1/1:3,30:33:69.24:1587,69,0	1/1:2,19:21:57.17:1172,57,0	1/1:1,16:17:45.15:1018,45,0	1/1:3,17:20:24.08:549,24,0	0/0:21,0:21:60.21:0,60,2100	0/0:14,0:14:42.14:0,42,1353	0/0:38,0:38:99:0,108,3616	0/0:22,0:22:63.22:0,63,2207	0/0:22,0:22:60.20:0,60,2023	0/0:15,0:15:42.14:0,42,1364	0/0:14,0:14:42.14:0,42,1399
chr10	15045117	.	C	CTGGTCACTGTCCCT	35814.20	PASS	AB=0.963;AC=19;AF=0.339;AN=56;BaseQRankSum=-8.761;DP=751;FS=8.813;HRun=0;HaplotypeScore=327.1401;InbreedingCoeff=0.9202;MQ=88.29;MQ0=0;MQRankSum=-18.222;QD=134.64;ReadPosRankSum=1.147;VQSLOD=3.5217;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,120,4698	1/1:6,3:12:30.08:1645,30,0	0/0:38,0:38:98.35:0,98,3468	0/0:34,0:34:94.84:0,95,3349	0/0:15,0:15:45.15:0,45,1766	0/0:26,0:26:78.26:0,78,3090	0/0:20,0:20:57.18:0,57,2190	1/1:34,4:42:99:5226,111,0	1/1:13,13:31:72.25:4579,72,0	1/1:14,14:29:81.27:4833,81,0	1/1:13,8:23:51.09:2807,51,0	0/0:32,0:32:96.31:0,96,3703	0/0:22,0:22:66.23:0,66,2531	0/0:28,0:28:78.26:0,78,2862	0/0:30,0:30:75.21:0,75,2907	0/1:25,1:26:99:138,0,2641	1/1:15,6:22:48.16:3012,48,0	0/0:33,0:33:81.26:0,81,2891	0/0:23,0:23:66.23:0,66,2508	0/0:25,0:25:60.21:0,60,2417	0/0:21,0:21:57.15:0,57,2216	0/0:21,0:21:54.17:0,54,2033	0/0:14,0:14:42.14:0,42,1542	0/0:39,0:39:99:0,117,4408	0/0:20,0:20:57.20:0,57,2171	1/1:17,15:33:93.28:5890,93,0	1/1:15,15:31:90.78:5429,91,0	1/1:5,9:14:33.11:2255,33,0
chr10	15045446	.	ATG	A	9186.79	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=6.568;DP=819;FS=2.887;HRun=0;HaplotypeScore=138.7581;InbreedingCoeff=0.9604;MQ=64.37;MQ0=2;MQRankSum=-0.740;QD=27.34;ReadPosRankSum=2.274;VQSLOD=6.1843;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,1:33:35.04:0,35,1053	1/1:1,17:18:36.11:446,36,0	0/0:32,1:21:1.65:0,2,493	0/0:32,0:24:47.88:0,48,634	1/1:5,18:24:46.50:646,46,0	1/1:4,18:23:50.99:609,51,0	1/1:4,27:32:75.07:906,75,0	1/1:13,23:36:69.18:825,69,0	1/1:2,23:26:66.04:795,66,0	1/1:3,31:35:93.27:1138,93,0	1/1:3,21:24:42.13:513,42,0	0/0:29,1:30:44.04:0,44,1188	0/0:23,0:23:60.20:0,60,980	0/0:23,0:23:57.18:0,57,908	0/0:43,0:43:99:0,111,1801	0/0:30,0:30:90.28:0,90,1427	1/1:5,28:35:80.87:941,81,0	0/0:28,0:28:72.25:0,72,1177	0/0:37,0:37:66.18:0,66,980	0/0:19,1:20:7.95:0,8,646	0/0:32,0:32:90.31:0,90,1462	0/0:35,0:35:96.31:0,96,1533	0/0:22,0:22:57.19:0,57,935	0/0:26,0:27:66.23:0,66,1077	0/0:34,1:35:59.08:0,59,1432	1/1:2,29:31:87.10:1054,87,0	1/1:7,28:36:78.07:942,78,0	1/1:4,11:15:30.09:372,30,0
chr10	15046720	.	TCAGTTGAAGTTAGGATG	T	25723.84	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=7.207;DP=547;FS=10.772;HRun=0;HaplotypeScore=269.8845;InbreedingCoeff=0.7131;MQ=81.89;MQ0=0;MQRankSum=-9.072;QD=52.28;ReadPosRankSum=6.841;VQSLOD=2.1524;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:17,13:30:36.12:1692,36,0	1/1:2,8:10:20.83:986,21,0	0/0:33,0:33:51.17:0,51,3071	0/0:22,0:22:42.10:0,42,2138	1/1:4,6:10:14.83:264,15,0	1/1:4,8:12:18.06:845,18,0	1/1:12,7:19:9.03:421,9,0	1/1:22,0:22:9.03:131,9,0	1/1:16,12:28:30.10:1410,30,0	1/1:5,7:12:21.07:850,21,0	1/1:3,4:7:5.98:76,6,0	1/1:14,20:34:48:2256,48,0	1/1:8,15:23:42.14:1974,42,0	1/1:11,16:27:45.15:2115,45,0	1/1:14,16:30:39.13:1833,39,0	1/1:9,13:22:33.11:1551,33,0	1/1:9,9:18:18.02:725,18,0	1/1:10,8:18:9.03:423,9,0	1/1:12,6:18:18.06:846,18,0	1/1:8,3:11:9:170,9,0	1/1:15,9:25:4.15:141,4,0	1/1:6,5:11:9.03:206,9,0	1/1:4,11:15:25.32:1008,25,0	1/1:17,8:25:11.86:503,12,0	1/1:7,10:17:24.08:1066,24,0	1/1:5,15:20:45.15:2115,45,0	1/1:6,17:23:39.13:1833,39,0	1/1:2,3:5:6.02:282,6,0
chr10	15048607	.	A	ATAAGAGCAGTTCT	13547.99	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-9.384;DP=571;FS=6.191;HRun=0;HaplotypeScore=242.6960;InbreedingCoeff=0.9958;MQ=81.91;MQ0=0;MQRankSum=-13.744;QD=119.89;ReadPosRankSum=-3.761;VQSLOD=3.5233;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:81.22:0,81,3031	0/0:13,0:13:39.11:0,39,1457	0/0:14,0:14:39.12:0,39,1232	0/0:21,0:21:48.11:0,48,1585	0/0:21,0:21:60.19:0,60,2196	0/0:17,0:17:48.12:0,48,1611	0/0:26,0:26:66.17:0,66,2167	0/0:19,0:19:51.13:0,51,1717	0/0:21,0:21:63.20:0,63,2299	0/0:20,0:20:57.20:0,57,2197	0/0:7,0:7:21.07:0,21,747	0/0:33,0:33:93.30:0,93,3446	0/0:23,0:23:63.18:0,63,2296	0/0:30,0:30:78.23:0,78,2695	1/1:8,8:17:42.14:2547,42,0	1/1:9,7:17:42.14:2358,42,0	0/0:29,0:29:78.25:0,78,2847	1/1:11,10:22:51.17:2767,51,0	1/1:9,1:14:39.12:1713,39,0	1/1:5,5:12:30.10:1391,30,0	1/1:15,11:31:59.85:2773,60,0	0/0:19,0:19:51.18:0,51,1975	0/0:15,0:15:36.11:0,36,1324	0/0:33,0:33:93.30:0,93,3496	0/0:17,0:17:45.15:0,45,1721	0/0:24,0:24:63.22:0,63,2411	0/0:22,0:22:60.17:0,60,2036	0/0:6,0:6:15.02:0,15,499
chr10	15051172	.	CG	C	17913.44	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=4.942;DP=707;FS=0.747;HRun=4;HaplotypeScore=73.9622;InbreedingCoeff=0.9925;MQ=89.17;MQ0=0;MQRankSum=-6.225;QD=31.65;ReadPosRankSum=5.263;VQSLOD=5.1176;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,57:58:99:1835,153,0	1/1:0,10:10:27.08:324,27,0	0/0:26,1:27:50.65:0,51,884	0/0:26,0:26:69.23:0,69,953	1/1:3,20:23:60.16:706,60,0	1/1:0,18:18:48.15:575,48,0	1/1:0,24:24:57.17:684,57,0	1/1:2,21:23:60.14:703,60,0	1/1:0,31:31:90.28:1080,90,0	1/1:3,30:33:87.26:1034,87,0	1/1:0,25:25:66.20:791,66,0	1/1:3,29:32:84.26:1007,84,0	1/1:0,32:32:84.26:1007,84,0	1/1:1,23:24:66.20:792,66,0	1/1:3,20:23:51.15:612,51,0	1/1:2,22:24:63.19:755,63,0	1/1:1,30:31:87.27:1044,87,0	1/1:0,20:20:57.17:684,57,0	0/0:21,0:21:51.15:0,51,690	0/0:13,0:13:36.11:0,36,486	0/0:54,0:54:99:0,156,2057	1/1:0,16:16:45.14:540,45,0	1/1:4,11:15:33.10:396,33,0	1/1:1,22:23:66.20:792,66,0	1/1:0,21:21:60.18:719,60,0	1/1:1,29:30:81.25:971,81,0	1/1:2,22:23:60.18:719,60,0	1/1:0,6:6:12.04:144,12,0
chr10	15052309	.	C	CA	7825.32	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-7.000;DP=621;FS=1.858;HRun=1;HaplotypeScore=100.0475;InbreedingCoeff=0.9934;MQ=89.71;MQ0=0;MQRankSum=-1.906;QD=38.55;ReadPosRankSum=2.159;VQSLOD=5.1860;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,45:47:99:1918,129,0	0/0:13,0:13:36.12:0,36,467	0/0:25,0:25:71.42:0,71,859	0/0:26,0:26:64.84:0,65,846	0/0:17,0:17:48.16:0,48,622	0/0:17,0:17:45.15:0,45,584	0/0:25,0:25:72.23:0,72,935	0/0:19,0:19:54.17:0,54,689	0/0:22,0:22:63.20:0,63,817	0/0:30,0:30:90.29:0,90,1159	0/0:6,0:6:12.04:0,12,156	1/1:1,30:31:81.27:1213,81,0	1/1:1,20:21:48.16:719,48,0	1/1:0,13:13:30.10:449,30,0	0/0:21,0:21:63.17:0,63,789	0/0:17,0:17:51.16:0,51,649	0/0:33,0:33:96.24:0,96,1198	0/0:23,0:23:63.20:0,63,817	0/0:20,0:20:60.13:0,60,732	0/0:18,0:18:48.16:0,48,623	0/0:38,0:38:99:0,114,1463	1/1:1,15:16:42.14:625,42,0	1/1:2,21:23:60.13:862,60,0	1/1:0,35:35:90.24:1320,90,0	1/1:1,16:17:48.16:719,48,0	0/0:22,0:22:63.04:0,63,793	0/0:20,0:20:51.14:0,51,633	0/0:6,0:6:18.06:0,18,234
chr10	15053930	.	TC	T	1038.91	PASS	AB=0.904;AC=23;AF=0.426;AN=54;BaseQRankSum=1.773;DP=312;FS=1.410;HRun=12;HaplotypeScore=56.1360;InbreedingCoeff=0.3159;MQ=68.89;MQ0=0;MQRankSum=0.994;QD=5.30;ReadPosRankSum=1.513;VQSLOD=1.5050;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,16:27:31.88:238,32,0	0/0:5,0:5:9.02:0,9,90	0/1:11,1:11:13.31:59,0,13	0/1:7,0:7:27.73:28,0,34	1/1:1,3:6:13.04:81,13,0	1/1:10,3:13:23.68:168,24,0	1/1:9,10:19:28.91:215,29,0	0/0:12,0:11:11.96:0,12,99	0/0:10,0:10:12.02:0,12,122	0/0:6,0:7:8.85:0,9,75	0/0:5,0:5:5.91:0,6,38	0/1:8,1:9:14.21:14,0,52	0/0:10,0:10:9:0,9,85	0/0:13,0:14:11.08:0,11,142	0/1:9,0:9:0.04:0,0,0	0/1:12,2:14:2.32:2,0,146	0/0:17,2:19:0.86:0,1,190	0/1:7,5:12:68.87:69,0,84	1/1:10,6:16:17.87:137,18,0	1/1:1,5:7:13.95:94,14,0	1/1:11,7:19:11.91:93,12,0	0/0:6,0:6:2.99:0,3,24	0/1:7,0:7:0.56:1,0,25	0/1:9,1:11:8.26:8,0,90	0/0:6,0:7:3.01:0,3,30	0/1:7,1:8:5.21:5,0,119	0/0:20,0:20:20.86:0,21,189	./.
chr10	15053981	.	C	CT	3190.66	PASS	AB=0.938;AC=51;AF=0.911;AN=56;BaseQRankSum=-0.641;DP=420;FS=11.803;HRun=10;HaplotypeScore=113.9069;InbreedingCoeff=0.3380;MQ=58.25;MQ0=4;MQRankSum=-0.051;QD=9.22;ReadPosRankSum=1.710;VQSLOD=1.2829;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:16,17:33:77.77:735,78,0	1/1:9,0:9:6.67:26,7,0	0/0:48,0:16:23.36:0,23,222	0/0:26,0:13:4.58:0,5,55	0/1:14,1:15:10.75:72,0,11	1/1:9,0:9:6.56:43,7,0	1/1:14,0:14:4.78:74,5,0	1/1:25,0:24:14.03:63,14,0	1/1:8,0:9:3.46:26,3,0	1/1:13,0:14:27.57:134,28,0	1/1:7,0:8:2.75:15,3,0	1/1:10,2:10:16.81:141,17,0	1/1:4,2:6:5.97:52,6,0	1/1:11,6:17:38.46:352,38,0	1/1:8,0:8:5.97:51,6,0	1/1:3,0:3:8.61:69,9,0	1/1:9,0:9:2.88:8,3,0	1/1:17,0:17:4.23:200,4,0	1/1:19,0:19:3.12:38,3,0	1/1:22,0:21:34.11:193,34,0	1/1:10,0:10:8.18:36,8,0	1/1:1,1:3:7.44:50,7,0	1/1:6,6:12:12.68:136,13,0	1/1:10,3:13:2.78:195,3,0	1/1:10,8:19:41.76:391,42,0	1/1:20,0:20:24.26:98,24,0	1/1:15,0:15:20.27:81,20,0	1/1:4,0:4:8.17:35,8,0
chr10	15053982	.	T	TC	758.70	PASS	AB=1.000;AC=14;AF=0.250;AN=56;BaseQRankSum=-2.040;DP=432;FS=2.152;HRun=1;HaplotypeScore=127.9373;InbreedingCoeff=0.2909;MQ=56.36;MQ0=4;MQRankSum=-0.844;QD=4.60;ReadPosRankSum=5.441;VQSLOD=0.7047;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:33:30.01:131,0,30	0/0:9,0:9:20.04:0,20,138	0/0:47,0:15:40.93:0,41,407	0/0:27,0:13:11.62:0,12,123	0/0:18,0:18:21.23:0,21,215	0/0:9,0:9:16:0,16,92	0/0:14,0:14:28.69:0,29,230	0/0:26,0:25:56.67:0,57,436	0/0:10,0:10:22:0,22,157	0/0:14,0:14:22.95:0,23,144	0/0:8,0:8:19.08:0,19,139	0/1:12,0:10:4.19:4,0,58	1/1:7,0:7:2.26:6,2,0	0/1:17,0:17:27.99:28,0,50	0/0:8,0:8:2.80:0,3,24	0/0:3,0:3:1.08:0,1,15	0/0:14,0:14:20.25:0,20,130	0/0:15,0:15:11.11:0,11,131	1/1:19,0:19:9.82:194,10,0	1/1:16,7:22:17.65:245,18,0	1/1:7,3:10:26.68:226,27,0	0/0:3,0:3:2.68:0,3,34	0/1:12,0:12:26.85:27,0,40	0/1:13,0:13:27.99:28,0,80	0/1:19,0:19:31.25:31,0,67	0/0:22,0:21:23.45:0,23,257	0/0:16,0:16:32.98:0,33,202	0/0:4,0:4:8.12:0,8,36
chr10	15053991	.	TG	T	3662.51	PASS	AB=1.000;AC=44;AF=0.786;AN=56;BaseQRankSum=-3.501;DP=455;FS=0.966;HRun=1;HaplotypeScore=95.0166;InbreedingCoeff=0.2116;MQ=51.52;MQ0=18;MQRankSum=-0.992;QD=9.82;ReadPosRankSum=-2.843;VQSLOD=0.3129;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:36,0:35:11.01:11,0,277	1/1:7,0:7:14.08:89,14,0	0/0:47,1:16:10.08:0,10,168	0/0:30,3:13:6.47:0,6,52	1/1:17,0:17:36.96:240,37,0	1/1:10,0:10:21.89:139,22,0	1/1:12,0:11:28.03:210,28,0	1/1:28,0:26:61.94:423,62,0	1/1:10,0:10:21.04:118,21,0	1/1:18,0:16:40.39:259,40,0	1/1:9,0:9:6.93:53,7,0	0/1:13,0:10:23.11:23,0,90	0/1:8,0:8:17.85:18,0,21	0/1:15,0:15:35.57:92,0,36	1/1:0,7:7:8.89:91,9,0	1/1:4,2:4:11.70:111,12,0	1/1:19,0:18:22.54:223,23,0	1/1:9,5:12:5.73:280,6,0	1/1:17,0:17:46.87:317,47,0	1/1:20,0:18:44.62:252,45,0	1/1:11,0:8:21.34:142,21,0	0/1:6,0:6:13.62:14,0,52	0/1:13,0:12:6.22:6,0,68	0/1:15,0:13:2.63:3,0,112	0/1:19,0:19:4.15:4,0,133	1/1:24,0:21:38.51:261,39,0	1/1:15,0:15:34.39:226,34,0	1/1:4,0:4:8.87:58,9,0
chr10	15053992	.	GT	G	597.16	PASS	AB=0.931;AC=16;AF=0.286;AN=56;BaseQRankSum=-2.516;DP=469;FS=6.608;HRun=11;HaplotypeScore=114.7385;InbreedingCoeff=0.2375;MQ=50.70;MQ0=20;MQRankSum=-1.943;QD=3.18;ReadPosRankSum=0.224;VQSLOD=0.8301;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:35:82.05:0,82,772	1/1:6,1:7:9.92:58,10,0	0/0:47,0:16:1.29:0,1,108	0/0:32,0:14:6.36:0,6,43	0/0:17,0:17:14.65:0,15,110	0/0:12,0:12:18.61:0,19,101	0/0:11,0:10:11.74:0,12,60	0/1:24,4:26:13.10:94,0,13	0/1:10,0:10:17.16:17,0,30	0/1:16,2:16:4.72:93,0,5	0/1:8,1:9:20.22:20,0,38	0/0:12,0:9:24.49:0,24,235	0/0:7,0:8:9.38:0,9,88	0/0:15,0:15:24.22:0,24,237	0/1:10,0:10:4.67:25,0,5	0/1:6,0:4:3.61:21,0,4	0/1:17,2:18:7.47:7,0,34	0/1:19,0:17:21:62,0,21	0/1:19,0:19:1.77:2,0,5	0/0:21,0:19:27.34:0,27,137	0/0:11,0:8:8.40:0,8,31	0/0:6,0:6:12.03:0,12,127	0/0:13,0:12:18.46:0,18,190	0/0:14,0:13:23.79:0,24,231	0/0:19,0:19:45.72:0,46,466	1/1:17,6:20:31.09:231,31,0	0/1:10,6:15:0.53:90,0,1	1/1:3,1:4:8.39:40,8,0
chr10	15053993	.	T	TTTG	1408.98	PASS	AB=0.954;AC=15;AF=0.268;AN=56;BaseQRankSum=-5.504;DP=476;FS=10.724;HRun=0;HaplotypeScore=130.0154;InbreedingCoeff=0.0970;MQ=49.56;MQ0=23;MQRankSum=-0.945;QD=7.38;ReadPosRankSum=0.728;VQSLOD=2.6356;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:35:89.88:0,90,1129	1/1:2,4:7:13.95:159,14,0	0/0:52,0:16:24.34:0,24,316	0/0:35,0:14:8.11:0,8,93	0/0:17,0:17:35.70:0,36,272	0/0:12,0:12:30.97:0,31,177	0/0:10,0:9:22.98:0,23,135	0/1:28,1:27:99:107,0,99	1/1:10,0:10:1.34:94,1,0	0/1:17,3:17:20.85:389,0,21	0/1:10,0:10:7.31:7,0,22	0/0:12,0:9:24.59:0,25,305	0/0:9,0:9:13.99:0,14,155	0/0:14,0:14:38.46:0,38,394	0/0:9,0:9:12.39:0,12,61	0/0:6,0:4:11.24:0,11,65	0/1:18,0:17:34:34,0,122	0/0:22,0:20:40.96:0,41,256	0/1:20,0:20:22.87:23,0,101	0/1:21,0:19:76.32:113,0,76	0/1:11,0:8:48.09:48,0,57	0/0:5,0:5:12.04:0,12,174	0/0:12,0:11:25.20:0,25,304	0/0:15,0:13:33.39:0,33,348	0/0:19,0:19:54.04:0,54,670	0/1:20,3:20:35.96:251,0,36	0/1:14,2:15:30.42:164,0,30	1/1:2,3:5:9.03:184,9,0
chr10	15053994	.	T	TTG	806.65	PASS	AB=0.949;AC=14;AF=0.250;AN=56;BaseQRankSum=-2.850;DP=480;FS=11.002;HRun=0;HaplotypeScore=125.8822;InbreedingCoeff=-0.1704;MQ=49.45;MQ0=23;MQRankSum=-1.261;QD=3.97;ReadPosRankSum=2.240;VQSLOD=1.7679;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:35:87.82:0,88,1124	0/1:7,0:7:9.22:62,0,9	0/0:52,0:16:24.52:0,25,306	0/0:36,0:14:6.16:0,6,80	0/0:16,0:16:23.26:0,23,249	0/0:12,0:12:31.72:0,32,201	0/0:10,0:9:24.19:0,24,123	0/1:28,0:26:23.26:23,0,261	0/1:10,0:10:35.04:35,0,37	0/1:20,0:17:97.65:128,0,98	0/0:10,0:10:10.65:0,11,55	0/0:12,0:9:22.29:0,22,270	0/0:9,0:9:14.27:0,14,144	0/0:14,0:14:37.24:0,37,367	0/1:12,0:12:7.71:8,0,29	0/1:7,0:5:18.11:18,0,24	0/0:18,0:17:0.65:0,1,162	0/1:22,0:20:20.54:21,0,163	0/1:17,0:19:66.39:130,0,66	0/1:12,7:19:29.16:264,0,29	0/1:8,2:8:47.57:99,0,48	0/0:5,0:5:12.04:0,12,171	0/0:12,0:11:26.58:0,27,312	0/0:16,0:14:33.75:0,34,368	0/0:19,0:19:53.79:0,54,659	0/1:24,0:20:42.39:42,0,181	0/1:16,0:15:47.09:47,0,108	1/1:6,0:6:9.01:86,9,0
chr10	15054003	.	TG	T	1941.60	PASS	AB=0.980;AC=29;AF=0.518;AN=56;BaseQRankSum=-3.010;DP=519;FS=1.323;HRun=1;HaplotypeScore=105.8673;InbreedingCoeff=0.1445;MQ=43.13;MQ0=43;MQRankSum=-2.268;QD=5.47;ReadPosRankSum=-1.767;VQSLOD=-0.2463;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,1:34:23.46:0,23,667	1/1:7,1:8:1.49:45,1,0	0/0:41,5:10:11.59:0,12,127	0/1:36,5:12:8.68:9,0,16	0/1:18,0:18:41.94:42,0,101	0/1:12,0:12:43.37:56,0,43	0/1:11,0:9:10.73:86,0,11	1/1:25,1:23:41.91:304,42,0	1/1:9,1:10:24.91:165,25,0	0/1:22,1:19:41.86:153,0,42	0/1:12,1:11:43.98:53,0,44	0/0:15,0:12:1.32:0,1,147	0/0:9,0:9:17.84:0,18,154	0/1:16,0:16:55.61:56,0,185	1/1:13,0:13:26.81:143,27,0	1/1:8,0:6:16.07:92,16,0	1/1:21,0:19:13.44:210,13,0	1/1:21,0:19:17.81:232,18,0	0/1:25,0:15:37.83:38,0,42	0/1:23,0:21:68.27:68,0,108	0/1:9,0:6:22.21:26,0,22	0/0:6,0:6:14.39:0,14,132	0/0:11,0:10:23.86:0,24,226	0/0:17,0:14:30.07:0,30,245	0/0:25,0:25:41.32:0,41,507	1/1:23,1:19:12.10:146,12,0	0/1:21,0:19:12.78:156,0,13	1/1:10,0:8:8.44:49,8,0
chr10	15054019	.	T	TG	1390.91	PASS	AB=0.927;AC=18;AF=0.321;AN=56;BaseQRankSum=0.332;DP=497;FS=1.406;HRun=0;HaplotypeScore=95.9892;InbreedingCoeff=0.5460;MQ=43.15;MQ0=46;MQRankSum=0.114;QD=6.82;ReadPosRankSum=5.406;VQSLOD=3.5966;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:23,10:32:21.92:383,22,0	0/0:6,0:6:14.91:0,15,114	0/1:37,0:7:0.18:0,0,122	0/0:41,0:11:13.97:0,14,122	0/1:19,1:19:65.09:65,0,71	0/1:12,0:12:0.46:60,0,0	0/1:10,0:8:27.07:27,0,33	0/0:24,0:20:35.60:0,36,337	0/0:10,0:10:5.66:0,6,125	0/0:23,0:18:52.89:0,53,378	0/0:15,0:13:19.36:0,19,154	1/1:11,1:9:3.72:69,4,0	0/1:8,3:11:4.38:117,0,4	0/1:11,3:14:37.18:113,0,37	0/0:13,0:13:29.67:0,30,203	0/0:10,0:8:20.93:0,21,178	0/0:22,0:20:32.99:0,33,276	0/0:22,0:20:57.59:0,58,447	0/0:27,0:15:41.83:0,42,337	0/0:22,0:21:59.25:0,59,408	0/0:10,0:8:20.70:0,21,149	1/1:4,3:7:14.90:96,15,0	1/1:5,6:10:13.28:140,13,0	1/1:12,4:13:17.69:155,18,0	1/1:13,8:21:34.66:350,35,0	0/0:21,0:17:45.49:0,45,351	0/0:20,0:18:44.42:0,44,320	0/0:7,0:5:9:0,9,81
chr10	15054025	.	T	TTG	1512.99	PASS	AB=0.891;AC=16;AF=0.286;AN=56;BaseQRankSum=-1.199;DP=465;FS=2.176;HRun=0;HaplotypeScore=100.1014;InbreedingCoeff=0.4597;MQ=47.42;MQ0=41;MQRankSum=1.144;QD=9.23;ReadPosRankSum=4.538;VQSLOD=3.1819;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:23,8:31:12.04:355,12,0	0/0:6,0:6:14.69:0,15,112	0/0:37,0:8:20.69:0,21,185	0/0:36,0:9:14.97:0,15,81	0/1:21,0:20:59.89:60,0,80	0/1:8,0:9:28.95:29,0,37	0/1:10,0:8:33.62:67,0,34	0/0:21,0:17:37.47:0,37,293	0/0:11,0:11:28.90:0,29,186	0/0:20,0:16:44.60:0,45,339	0/0:13,0:11:24.31:0,24,178	0/1:12,1:10:8.26:130,0,8	1/1:8,3:11:17.91:180,18,0	0/1:10,3:13:53.19:137,0,53	0/0:11,0:11:26.62:0,27,180	0/0:7,0:6:13.24:0,13,109	0/0:22,0:20:45.95:0,46,337	0/0:19,0:17:38.06:0,38,281	0/0:25,0:13:38.03:0,38,304	0/0:19,0:18:43.64:0,44,307	0/0:9,0:8:20.54:0,21,146	1/1:6,1:7:12.70:101,13,0	1/1:7,6:12:15.43:177,15,0	1/1:13,4:15:17.88:204,18,0	0/1:11,8:19:37.18:259,0,37	0/0:17,0:13:29.72:0,30,256	0/0:19,0:17:41.57:0,42,315	0/0:9,0:7:14.97:0,15,125
chr10	15058453	.	G	GGAGA	1690.19	PASS	AB=1.000;AC=33;AF=0.660;AN=50;BaseQRankSum=-3.509;DP=575;FS=56.391;HRun=0;HaplotypeScore=123.8563;InbreedingCoeff=0.5662;MQ=69.47;MQ0=14;MQRankSum=0.560;QD=5.37;ReadPosRankSum=-2.508;VQSLOD=-0.4509;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:29:11.55:0,12,86	1/1:8,0:8:6:87,6,0	./.	./.	1/1:21,0:20:2.91:41,3,0	1/1:20,0:20:5.97:92,6,0	1/1:16,5:23:10.32:139,10,0	1/1:24,0:24:1.82:5,2,0	1/1:9,0:8:9.03:151,9,0	1/1:17,4:22:12.04:221,12,0	1/1:10,0:10:5.95:43,6,0	0/0:20,0:26:9.01:0,9,84	0/0:13,0:20:17.71:0,18,155	0/0:13,0:20:18.01:0,18,164	1/1:21,0:21:18.04:292,18,0	1/1:13,0:13:2.93:64,3,0	1/1:14,6:20:13.57:233,14,0	1/1:20,0:20:15.05:275,15,0	1/1:20,0:19:0.47:1,0,0	0/0:19,0:19:3:0,3,46	0/1:21,0:21:28.85:39,0,29	0/0:18,0:18:3:0,3,28	./.	0/0:12,0:25:18.45:0,18,168	0/0:9,0:9:3:0,3,28	1/1:27,0:26:4.26:45,4,0	1/1:16,0:19:12.13:116,12,0	1/1:11,0:14:2.74:12,3,0
chr10	15061748	.	G	GC	11976.41	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-11.034;DP=616;FS=3.121;HRun=8;HaplotypeScore=64.7676;InbreedingCoeff=0.9774;MQ=83.40;MQ0=0;MQRankSum=-1.343;QD=26.79;ReadPosRankSum=2.163;VQSLOD=5.6842;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,34:39:62.80:976,63,0	1/1:0,6:6:18.05:208,18,0	0/0:19,0:19:35:0,35,299	0/0:20,0:19:5.76:0,6,201	0/0:16,0:16:38.99:0,39,351	0/0:22,0:22:59.07:0,59,527	0/0:24,0:24:72.04:0,72,659	1/1:2,18:20:29.71:595,30,0	1/1:0,26:28:68.87:755,69,0	1/1:6,16:22:47.79:553,48,0	1/1:1,8:9:24.07:277,24,0	1/1:5,28:33:84.25:964,84,0	1/1:3,23:26:63.19:726,63,0	1/1:4,26:30:44.75:768,45,0	0/0:21,0:21:54.02:0,54,494	0/0:21,0:21:63.03:0,63,577	1/1:4,34:40:99:1206,108,0	0/0:24,0:24:66.03:0,66,604	1/1:4,14:18:45.13:518,45,0	1/1:1,11:12:30.09:345,30,0	1/1:12,33:45:78.13:869,78,0	1/1:0,10:11:27.08:312,27,0	1/1:2,9:11:21.06:242,21,0	1/1:3,20:23:60.18:692,60,0	1/1:2,15:17:42.07:469,42,0	1/1:2,16:18:45.09:496,45,0	1/1:1,31:31:69.18:796,69,0	1/1:0,7:7:18.05:208,18,0
chr10	15064541	.	AC	A	3225.28	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=10.811;DP=795;FS=3.628;HRun=3;HaplotypeScore=77.6613;InbreedingCoeff=0.9956;MQ=86.88;MQ0=0;MQRankSum=-1.781;QD=31.93;ReadPosRankSum=-0.411;VQSLOD=3.4754;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,156,2185	0/0:7,0:7:18.05:0,18,241	0/0:34,0:34:96.26:0,96,1314	0/0:24,0:24:60.19:0,60,836	0/0:22,0:22:63.18:0,63,861	0/0:24,0:24:69.23:0,69,990	0/0:32,0:32:90.29:0,90,1277	0/0:39,0:39:99:0,114,1604	0/0:29,0:29:87.28:0,87,1234	0/0:20,0:20:54.18:0,54,774	0/0:12,0:12:33.06:0,33,434	0/0:46,0:46:99:0,132,1885	0/0:23,0:23:66.22:0,66,949	0/0:33,0:33:93.26:0,93,1295	0/0:39,0:39:99:0,114,1638	0/0:50,0:50:99:0,151,2160	0/0:32,0:32:87.26:0,87,1229	0/0:26,0:26:75.23:0,75,1049	1/1:1,21:22:63.18:767,63,0	1/1:0,21:21:50.78:631,51,0	1/1:1,57:58:99:1971,159,0	0/0:18,0:18:48.16:0,48,691	0/0:10,0:10:21.07:0,21,302	0/0:21,0:20:63.20:0,63,890	0/0:19,0:19:51.17:0,51,732	0/0:33,0:33:93.30:0,93,1321	0/0:32,0:31:96.31:0,96,1361	0/0:17,0:17:51.17:0,51,734
chr10	15065679	.	CT	C	1950.27	PASS	AB=0.725;AC=23;AF=0.411;AN=56;BaseQRankSum=3.194;DP=570;FS=5.794;HRun=12;HaplotypeScore=65.9237;InbreedingCoeff=0.6817;MQ=58.65;MQ0=6;MQRankSum=2.903;QD=8.19;ReadPosRankSum=4.637;VQSLOD=2.4530;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,39:47:63.26:655,63,0	1/1:0,1:1:2.99:23,3,0	0/0:15,0:7:8.94:0,9,58	0/1:10,0:7:1.30:16,0,1	0/0:31,0:35:57.58:0,58,529	0/0:19,0:20:37.97:0,38,399	0/0:17,0:17:19.21:0,19,338	0/0:14,0:29:51.47:0,51,270	0/0:3,1:20:2.49:0,2,91	0/0:10,0:18:30.12:0,30,184	0/0:6,0:14:17.32:0,17,106	0/1:9,7:16:12.92:82,0,13	1/1:3,10:13:26.89:209,27,0	1/1:7,12:20:4.40:203,4,0	0/0:20,0:20:39.06:0,39,384	0/0:18,0:18:35.24:0,35,377	0/0:9,0:32:59.86:0,60,315	0/0:25,1:26:34.29:0,34,503	1/1:11,1:17:15.19:58,15,0	1/1:2,0:13:18.11:52,18,0	1/1:6,1:28:31.48:106,31,0	1/1:1,6:7:11.95:93,12,0	1/1:7,10:18:22.94:168,23,0	1/1:6,22:29:4.85:403,5,0	0/1:6,7:14:57.38:84,0,57	0/0:5,0:21:46.38:0,46,275	0/0:6,0:21:22.73:0,23,114	0/0:7,1:15:2.77:0,3,140
chr10	15066005	.	T	TA	747.39	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-5.713;DP=327;FS=0.791;HRun=6;HaplotypeScore=33.9757;InbreedingCoeff=0.7572;MQ=58.36;MQ0=3;MQRankSum=-0.971;QD=26.69;ReadPosRankSum=-1.893;VQSLOD=2.3024;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:36.08:0,36,367	0/0:3,0:3:9.02:0,9,92	0/0:4,0:4:5.84:0,6,59	0/0:5,0:3:6.01:0,6,59	0/0:20,0:20:60.14:0,60,611	0/0:15,0:15:45.10:0,45,459	0/0:12,0:12:33.04:0,33,327	0/0:33,0:32:75.13:0,75,749	0/0:5,0:5:15.02:0,15,146	0/0:9,0:8:15.02:0,15,148	0/0:10,0:10:27.06:0,27,275	0/0:8,0:8:15.03:0,15,153	0/0:9,0:9:21.05:0,21,214	0/0:2,0:2:6.01:0,6,61	0/0:10,0:10:27.06:0,27,275	0/0:9,0:9:27.06:0,27,275	0/0:31,0:31:84.19:0,84,857	0/0:20,0:20:44.20:0,44,449	1/1:2,15:17:45.11:539,45,0	1/1:0,9:9:24.08:302,24,0	1/1:1,1:2:3.01:38,3,0	0/0:2,0:2:6.01:0,6,61	0/0:6,0:6:18.03:0,18,179	0/0:5,0:5:12.02:0,12,122	0/0:14,0:14:42.09:0,42,427	0/0:9,0:9:21.03:0,21,208	0/0:13,0:13:36.04:0,36,356	0/0:28,0:28:84.19:0,84,857
chr10	15066216	.	TTC	T	6311.49	PASS	AB=0.940;AC=21;AF=0.375;AN=56;BaseQRankSum=1.186;DP=476;FS=18.282;HRun=0;HaplotypeScore=104.1482;InbreedingCoeff=0.8185;MQ=65.23;MQ0=4;MQRankSum=-1.583;QD=28.30;ReadPosRankSum=-1.637;VQSLOD=4.4310;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:21:29.52:0,30,667	1/1:2,3:5:15.02:186,15,0	0/0:26,0:20:25.31:0,25,453	0/1:23,0:12:3.90:4,0,352	0/0:22,0:22:56.75:0,57,500	0/0:22,0:22:56.70:0,57,611	0/0:9,0:9:24.04:0,24,253	1/1:4,24:27:68.77:850,69,0	1/1:1,9:10:30.05:402,30,0	1/1:4,15:18:53.76:681,54,0	1/1:2,14:15:45.08:636,45,0	0/0:11,0:11:30.10:0,30,489	0/0:17,0:16:44.94:0,45,719	0/0:13,0:13:32.94:0,33,522	0/0:15,0:15:39.57:0,40,205	0/0:19,0:19:50.36:0,50,239	1/1:2,32:34:89.48:1292,89,0	0/0:12,0:12:18.09:0,18,128	0/1:14,1:15:0.67:1,0,311	0/1:13,2:15:40.67:41,0,318	0/0:6,0:6:15.01:0,15,138	0/0:8,0:8:24.07:0,24,380	0/0:10,0:9:27.06:0,27,405	0/0:20,0:20:23.95:0,24,627	0/0:21,0:18:44.83:0,45,717	1/1:1,23:24:72.11:965,72,0	1/1:2,20:22:59.54:844,60,0	1/1:1,11:12:27.09:411,27,0
chr10	15066217	.	TC	T	3739.05	PASS	AB=1.000;AC=22;AF=0.393;AN=56;BaseQRankSum=5.061;DP=473;FS=21.353;HRun=1;HaplotypeScore=105.4031;InbreedingCoeff=0.8324;MQ=64.20;MQ0=4;MQRankSum=-2.215;QD=17.31;ReadPosRankSum=0.163;VQSLOD=2.5557;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:21:39.70:0,40,545	1/1:5,0:5:14.94:116,15,0	0/0:23,1:18:21.33:0,21,380	0/0:23,0:12:4.34:0,4,283	0/0:22,0:22:50.14:0,50,295	0/0:22,0:22:50.53:0,51,358	0/0:9,0:9:23.46:0,23,156	1/1:26,2:27:68.64:538,69,0	1/1:10,0:10:29.84:222,30,0	1/1:16,3:18:53.76:427,54,0	1/1:16,0:15:44.78:334,45,0	0/0:11,0:11:30.03:0,30,375	0/0:17,0:16:40.55:0,41,543	0/0:13,0:13:32.94:0,33,410	0/1:15,0:15:17.74:68,0,18	1/1:19,0:19:22.19:69,22,0	1/1:32,2:34:89.59:705,90,0	0/1:12,0:12:2.42:29,0,2	0/0:14,0:14:21.24:0,21,221	0/0:15,0:15:4.13:0,4,205	0/0:5,0:5:14.31:0,14,72	0/0:9,0:9:24.07:0,24,302	0/0:10,0:9:27.04:0,27,322	0/0:20,0:20:34.37:0,34,505	0/0:21,0:18:44.84:0,45,557	1/1:24,0:24:71.61:542,72,0	1/1:20,2:21:59.78:488,60,0	1/1:11,1:12:26.87:202,27,0
chr10	15066218	.	CT	C	1467.34	PASS	AB=0.963;AC=24;AF=0.429;AN=56;BaseQRankSum=6.664;DP=486;FS=21.576;HRun=9;HaplotypeScore=119.9143;InbreedingCoeff=0.8230;MQ=64.65;MQ0=4;MQRankSum=-3.266;QD=5.92;ReadPosRankSum=0.017;VQSLOD=0.1599;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:22:31.73:0,32,439	1/1:5,0:5:4.61:12,5,0	0/1:23,2:19:31.49:31,0,188	0/0:22,0:12:25.78:0,26,261	0/0:2,1:22:20.99:0,21,203	0/0:5,0:23:59.48:0,59,313	0/0:1,0:9:22.89:0,23,136	0/1:30,0:29:25.56:32,0,26	1/1:12,0:12:14.62:39,15,0	1/1:20,0:19:23.14:67,23,0	1/1:16,0:15:20.68:54,21,0	0/0:11,0:11:27.08:0,27,312	0/0:16,1:16:17.66:0,18,454	0/0:13,0:13:30.09:0,30,345	1/1:2,13:15:36.03:335,36,0	1/1:0,19:19:54.03:493,54,0	1/1:34,0:34:48.82:155,49,0	1/1:3,9:12:29.02:252,29,0	0/0:5,0:15:23.15:0,23,125	0/0:7,0:17:27.56:0,28,152	0/0:0,0:5:14.20:0,14,72	0/0:9,0:9:21.06:0,21,242	0/0:10,0:9:23.96:0,24,250	0/0:20,0:20:28.43:0,28,403	0/0:21,0:18:38.92:0,39,442	1/1:24,0:24:28.42:74,28,0	1/1:22,0:21:33.74:103,34,0	1/1:13,0:13:14.47:39,14,0
chr10	15066276	.	C	CTT	3518.97	PASS	AB=0.893;AC=22;AF=0.393;AN=56;BaseQRankSum=-8.470;DP=593;FS=4.365;HRun=1;HaplotypeScore=201.0152;InbreedingCoeff=-0.4830;MQ=53.19;MQ0=5;MQRankSum=-2.350;QD=8.30;ReadPosRankSum=-1.645;VQSLOD=-0.3977;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:20,9:28:81.72:452,0,82	0/1:7,0:7:9.75:10,0,51	0/0:16,0:9:26.38:0,26,271	0/0:30,0:20:26.57:0,27,380	0/1:25,0:25:19.34:19,0,462	0/1:20,0:20:28.22:28,0,304	0/1:14,0:14:10.97:11,0,132	0/0:40,0:35:34.11:0,34,299	0/0:15,0:15:37.70:0,38,217	0/1:28,0:27:13.53:14,0,210	0/1:18,0:14:46.33:46,0,101	0/1:17,8:26:99:476,0,144	0/1:2,13:15:0.70:557,0,1	0/1:6,7:14:63.31:173,0,63	0/1:32,0:32:99:220,0,174	0/1:34,0:34:99:157,0,267	0/1:34,0:34:26.38:26,0,338	0/1:12,0:12:25.67:26,0,49	0/1:17,0:15:87.96:88,0,273	0/1:21,0:21:9.93:10,0,237	0/1:9,0:9:29.15:75,0,29	0/1:12,6:18:99:334,0,126	1/1:6,4:9:0.46:241,0,0	0/1:12,7:19:93.75:119,0,94	0/1:13,9:19:91.79:436,0,92	0/0:19,0:19:20.75:0,21,163	0/0:33,0:31:47.91:0,48,289	0/0:15,0:15:38:0,38,193
chr10	15066280	.	C	CTT	5407.02	PASS	AB=0.920;AC=23;AF=0.411;AN=56;BaseQRankSum=-10.180;DP=602;FS=6.571;HRun=1;HaplotypeScore=197.1162;InbreedingCoeff=-0.4712;MQ=53.99;MQ0=5;MQRankSum=-0.100;QD=12.49;ReadPosRankSum=-4.841;VQSLOD=-0.3419;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:29:73.10:475,0,73	0/1:7,0:7:15.04:15,0,39	0/0:19,0:11:16.44:0,16,270	0/0:28,0:18:9.02:0,9,309	0/1:22,0:26:99:110,0,208	0/1:18,0:21:96.61:136,0,97	0/1:16,0:16:52.87:88,0,53	0/0:38,0:33:1.02:0,1,209	0/0:15,0:15:33.72:0,34,188	0/1:27,0:26:27.82:28,0,149	0/1:17,0:13:51.13:51,0,88	0/1:29,0:29:99:540,0,118	1/1:16,0:16:2.72:559,3,0	0/1:15,0:15:53.85:190,0,54	0/1:19,13:32:99:782,0,126	0/1:23,10:33:99:563,0,208	0/1:34,0:34:30.79:31,0,268	0/1:7,4:11:30.41:230,0,30	0/1:15,0:15:99:160,0,129	0/1:7,1:23:99:130,0,158	0/1:11,0:11:4.26:91,0,4	0/1:19,0:19:99:366,0,118	1/1:11,0:10:6.45:270,6,0	0/1:16,0:16:54.02:189,0,54	0/1:22,0:19:81.08:402,0,81	0/0:19,0:19:16.25:0,16,136	0/0:32,0:30:4.70:0,5,205	0/0:17,0:17:31.58:0,32,146
chr10	15066293	.	T	TC	2912.23	PASS	AB=0.802;AC=23;AF=0.411;AN=56;BaseQRankSum=0.532;DP=596;FS=0.000;HRun=0;HaplotypeScore=177.2505;InbreedingCoeff=-0.7307;MQ=60.01;MQ0=2;MQRankSum=-10.733;QD=5.79;ReadPosRankSum=-1.061;VQSLOD=3.0445;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:22,7:29:99:104,0,654	0/1:8,1:9:16.85:17,0,226	0/0:22,0:16:34.11:0,34,484	0/0:29,0:21:29.34:0,29,449	0/1:19,5:24:89.21:89,0,473	0/1:17,6:23:99:143,0,491	0/1:16,2:18:19.42:19,0,511	0/1:17,5:21:99:189,0,415	0/1:14,6:20:91.99:92,0,431	0/1:21,10:30:99:312,0,672	0/0:13,3:13:2.90:0,3,455	0/1:22,8:30:99:201,0,774	0/1:7,7:14:99:189,0,128	0/1:15,2:17:37.35:37,0,365	0/1:20,11:31:99:220,0,653	0/1:26,9:35:99:171,0,917	0/1:21,9:30:97.72:98,0,620	0/1:12,3:15:49.38:49,0,372	0/1:12,3:14:99:127,0,235	0/1:15,2:17:70.52:71,0,118	0/0:8,1:9:13.38:0,13,292	0/1:14,4:18:63.07:63,0,482	0/1:11,4:14:83.27:83,0,368	0/0:16,1:17:3.82:0,4,457	0/1:14,7:21:99:155,0,470	0/1:14,7:21:99:268,0,446	0/1:16,13:28:99:343,0,511	0/1:16,3:19:25.23:25,0,605
chr10	15066653	.	ATGG	A	100.86	PASS	AB=0.979;AC=8;AF=0.143;AN=56;BaseQRankSum=4.670;DP=543;FS=25.189;HRun=0;HaplotypeScore=128.4615;InbreedingCoeff=0.0329;MQ=62.30;MQ0=4;MQRankSum=-2.705;QD=0.76;ReadPosRankSum=-4.286;VQSLOD=-0.6915;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:13.75:0,14,933	0/1:8,0:8:10.19:10,0,135	0/0:34,0:18:54.18:0,54,1115	0/0:28,1:22:60.93:0,61,1263	0/0:13,0:13:15.03:0,15,302	0/0:11,0:11:22.32:0,22,495	0/0:19,0:18:43.23:0,43,925	0/1:24,4:27:46.12:46,0,1467	0/0:13,0:13:29.39:0,29,497	0/0:16,0:16:36.12:0,36,826	0/0:8,0:8:6.02:0,6,124	0/0:14,0:14:35.71:0,36,725	0/0:18,0:18:3.96:0,4,572	0/1:24,0:24:48.78:49,0,834	0/0:21,0:21:39.13:0,39,866	0/0:20,0:20:33.58:0,34,611	0/0:22,0:22:46.37:0,46,920	0/0:14,0:14:27.07:0,27,743	0/0:20,0:19:54.18:0,54,1061	0/0:27,0:26:66.22:0,66,1179	0/0:39,0:39:98.85:0,99,1894	0/1:20,0:20:1.17:1,0,291	0/0:14,0:14:20.98:0,21,359	0/1:27,0:27:64.20:64,0,655	0/0:8,0:8:3.03:0,3,140	0/0:18,0:18:43.45:0,43,924	0/1:18,0:18:6.94:7,0,396	1/1:7,0:7:3.01:45,3,0
chr10	15066656	.	G	GCACACACACA	14956.70	PASS	AB=0.735;AC=47;AF=0.839;AN=56;BaseQRankSum=-0.233;DP=668;FS=0.000;HRun=0;HaplotypeScore=214.7610;InbreedingCoeff=0.6291;MQ=54.23;MQ0=5;MQRankSum=-8.387;QD=27.65;ReadPosRankSum=-1.027;VQSLOD=3.9132;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:16,18:37:32.78:1311,33,0	1/1:8,0:7:6.02:93,6,0	0/0:31,0:16:15.04:0,15,304	0/0:27,0:20:3.63:0,4,381	1/1:9,0:17:3.01:31,3,0	1/1:22,0:22:18.02:374,18,0	1/1:23,0:22:23.98:446,24,0	1/1:40,0:37:53.34:1241,53,0	1/1:7,0:17:19.94:744,20,0	1/1:16,0:25:39.08:1176,39,0	1/1:4,0:10:3.01:133,3,0	1/1:8,7:16:15.05:693,15,0	1/1:11,11:24:12.04:440,12,0	1/1:14,12:29:24.08:1086,24,0	1/1:22,0:32:27.09:988,27,0	1/1:9,0:20:9.03:393,9,0	1/1:20,0:30:24.08:924,24,0	1/1:22,0:22:32.96:744,33,0	0/1:15,0:24:98.37:98,0,275	0/0:6,0:26:36.88:0,37,664	0/0:14,0:41:72.51:0,73,786	1/1:5,17:24:9.03:362,9,0	1/1:6,9:16:6.02:301,6,0	1/1:17,18:35:17.72:704,18,0	1/1:3,5:10:12.04:437,12,0	1/1:16,0:28:50.92:1156,51,0	1/1:7,0:22:24.08:951,24,0	1/1:0,0:7:3.01:131,3,0
chr10	15066826	.	T	TA	3582.61	PASS	AB=0.996;AC=29;AF=0.518;AN=56;BaseQRankSum=-1.843;DP=494;FS=1.789;HRun=4;HaplotypeScore=86.9641;InbreedingCoeff=0.2074;MQ=71.57;MQ0=0;MQRankSum=-2.077;QD=9.92;ReadPosRankSum=3.762;VQSLOD=0.8497;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:43,2:44:90.16:901,90,0	1/1:3,0:3:4.17:12,4,0	0/0:13,0:13:17.26:0,17,178	0/0:11,0:11:20.84:0,21,154	0/0:32,0:31:77.48:0,77,579	0/0:13,0:13:32.86:0,33,253	0/0:18,0:18:38.77:0,39,289	0/1:28,0:28:53.95:54,0,84	0/1:10,0:10:16.70:17,0,29	0/1:17,0:16:26.13:26,0,35	0/1:17,0:17:33.80:34,0,61	1/1:11,1:12:23.74:213,24,0	1/1:16,1:17:39.07:387,39,0	1/1:19,0:19:42.06:400,42,0	0/0:17,0:17:27.22:0,27,146	0/0:13,0:13:25.50:0,25,138	0/1:24,0:24:35.21:35,0,143	0/0:16,0:16:22.36:0,22,122	0/1:17,0:17:13.48:13,0,92	0/1:18,0:18:40.89:41,0,52	0/1:16,0:16:23.29:23,0,45	1/1:9,0:9:20.64:153,21,0	1/1:19,0:19:42.02:402,42,0	1/1:14,0:14:32.64:299,33,0	1/1:18,1:19:39.07:390,39,0	0/1:23,1:24:19.49:52,0,19	0/1:22,0:22:14.85:105,0,15	0/1:11,0:11:9.04:27,0,9
chr10	15066830	.	A	AT	6835.51	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-8.002;DP=503;FS=8.637;HRun=11;HaplotypeScore=74.8836;InbreedingCoeff=0.9101;MQ=64.60;MQ0=2;MQRankSum=-1.208;QD=16.05;ReadPosRankSum=-0.308;VQSLOD=5.1979;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,0:47:81.32:587,81,0	1/1:0,4:4:9.02:91,9,0	0/0:8,0:9:10.62:0,11,72	0/0:8,0:8:0.52:0,1,3	0/0:7,0:31:43.83:0,44,129	0/0:2,0:11:18.32:0,18,53	0/0:2,0:17:29.23:0,29,89	1/1:6,22:28:65.91:636,66,0	1/1:2,7:10:23.82:215,24,0	1/1:4,15:17:42.04:416,42,0	1/1:4,13:17:33.03:324,33,0	1/1:1,1:12:20.72:144,21,0	1/1:1,1:19:38.35:242,38,0	1/1:2,0:20:41.30:261,41,0	1/1:7,0:19:22.80:123,23,0	1/1:5,0:11:20.01:105,20,0	1/1:9,17:25:15.85:342,16,0	1/1:2,1:15:28.61:159,29,0	1/1:4,13:19:41.69:376,42,0	1/1:4,15:19:30.99:415,31,0	1/1:3,12:15:33:322,33,0	1/1:0,0:8:11.74:72,12,0	1/1:1,0:20:38.43:249,38,0	1/1:1,0:17:33.77:221,34,0	1/1:1,0:20:38.31:242,38,0	1/1:3,19:22:46.29:530,46,0	1/1:3,19:23:33.88:519,34,0	1/1:1,10:11:24.05:244,24,0
chr10	15067223	.	C	CA	12036.92	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-4.567;DP=479;FS=5.162;HRun=8;HaplotypeScore=56.6724;InbreedingCoeff=0.9176;MQ=71.03;MQ0=0;MQRankSum=-3.383;QD=26.57;ReadPosRankSum=2.959;VQSLOD=5.6703;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,17:23:52.09:584,52,0	1/1:1,6:7:18.05:208,18,0	0/0:11,0:10:7.95:0,8,83	0/0:15,0:11:10.01:0,10,69	1/1:4,16:20:60.07:654,60,0	1/1:1,23:24:63.19:727,63,0	1/1:1,17:18:36.11:415,36,0	1/1:2,20:22:60.11:641,60,0	1/1:1,12:13:33.10:381,33,0	1/1:3,15:18:45.13:518,45,0	1/1:4,12:16:36.11:415,36,0	1/1:5,13:18:33.57:378,34,0	1/1:7,8:15:24.95:275,25,0	1/1:2,8:10:21.06:240,21,0	1/1:0,23:23:57.17:657,57,0	1/1:2,15:17:42.12:484,42,0	1/1:1,13:14:33.10:381,33,0	1/1:2,23:25:60.18:692,60,0	1/1:2,15:17:45.08:486,45,0	1/1:2,14:16:14.72:409,15,0	1/1:3,11:14:27.08:312,27,0	1/1:2,12:14:36.10:410,36,0	1/1:1,17:18:45.56:497,46,0	1/1:1,15:16:28.76:371,29,0	1/1:1,19:20:54.15:617,54,0	1/1:7,16:23:48.13:543,48,0	1/1:4,16:20:32.77:381,33,0	1/1:0,11:12:32.93:361,33,0
chr10	15067321	.	TGG	T	1644.98	PASS	AB=0.923;AC=7;AF=0.125;AN=56;BaseQRankSum=2.598;DP=443;FS=18.257;HRun=11;HaplotypeScore=62.8725;InbreedingCoeff=0.6392;MQ=63.06;MQ0=1;MQRankSum=-0.078;QD=19.35;ReadPosRankSum=3.331;VQSLOD=0.9705;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:19:14.17:0,14,138	0/0:7,0:7:9.03:0,9,135	0/0:3,0:3:6.02:0,6,89	0/0:8,0:7:9.01:0,9,95	1/1:3,20:22:54.13:574,54,0	1/1:7,16:23:54.07:558,54,0	1/1:3,23:27:62.88:650,63,0	0/0:16,0:17:21.05:0,21,282	0/0:9,1:11:23.55:0,24,308	0/0:24,0:24:33.07:0,33,463	0/0:19,1:21:1.16:0,1,379	0/0:15,0:18:24.04:0,24,251	0/0:14,0:14:12.01:0,12,126	0/0:9,0:9:12.01:0,12,127	0/0:21,0:21:48.13:0,48,676	0/0:18,0:20:47.62:0,48,658	0/0:14,0:14:27.06:0,27,372	0/0:25,0:26:62.42:0,62,864	0/0:6,0:7:8:0,8,63	0/0:19,0:20:32.54:0,33,369	0/1:11,1:12:4.87:5,0,300	0/0:9,0:11:5.97:0,6,47	0/0:12,0:12:3:0,3,27	0/0:8,0:10:12.02:0,12,127	0/0:19,0:21:27.04:0,27,284	0/0:15,0:15:21.95:0,22,301	0/0:20,0:23:56.83:0,57,670	0/0:7,0:7:9.03:0,9,139
chr10	15068144	.	G	GA	9493.57	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-1.243;DP=464;FS=0.559;HRun=1;HaplotypeScore=134.2829;InbreedingCoeff=0.8903;MQ=72.30;MQ0=0;MQRankSum=-4.700;QD=26.44;ReadPosRankSum=2.627;VQSLOD=4.8142;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,15:21:57.18:763,57,0	1/1:5,0:9:23.47:175,23,0	0/0:26,0:18:46:0,46,470	0/0:26,0:23:17.13:0,17,394	0/0:13,0:13:10.95:0,11,77	0/0:2,0:2:1.82:0,2,5	0/0:16,0:15:23.17:0,23,104	1/1:5,1:10:23.85:186,24,0	1/1:12,0:22:55.82:386,56,0	1/1:5,0:13:35.79:269,36,0	1/1:10,0:19:42.86:290,43,0	1/1:3,20:23:65.86:807,66,0	1/1:5,16:21:56.67:672,57,0	1/1:5,6:9:24.04:302,24,0	1/1:8,15:22:65.89:777,66,0	1/1:2,16:18:54.14:715,54,0	1/1:1,1:19:41.82:333,42,0	1/1:0,11:11:24.08:330,24,0	0/0:6,0:5:11.54:0,12,77	0/0:9,0:9:3.39:0,3,71	0/0:6,0:6:2.74:0,3,13	1/1:0,18:18:33.11:458,33,0	1/1:9,11:20:43.01:546,43,0	1/1:2,16:18:51.11:572,51,0	1/1:5,12:17:47.96:575,48,0	1/1:9,2:30:80.05:645,80,0	1/1:11,0:27:77.26:563,77,0	1/1:3,0:6:17.87:129,18,0
chr10	15068200	.	GAAGGAAGA	G	6826.18	PASS	AB=0.992;AC=38;AF=0.679;AN=56;BaseQRankSum=1.910;DP=449;FS=28.170;HRun=0;HaplotypeScore=256.1108;InbreedingCoeff=-0.2247;MQ=31.89;MQ0=3;MQRankSum=-1.215;QD=15.48;ReadPosRankSum=-6.531;VQSLOD=1.3627;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:25:63.56:64,0,456	1/1:7,1:8:20.77:201,21,0	0/0:8,0:5:15.05:0,15,301	0/1:5,0:5:7.55:8,0,265	1/1:13,0:13:32.50:235,32,0	1/1:13,0:13:38.65:307,39,0	1/1:5,0:5:14.69:91,15,0	0/1:29,0:28:99:426,0,139	1/1:13,4:17:29.61:493,30,0	1/1:6,1:7:17.90:220,18,0	1/1:17,6:23:3.78:546,4,0	0/1:27,0:27:70.67:71,0,917	0/1:13,0:14:0.03:0,0,654	0/1:14,0:13:55.12:55,0,224	0/1:22,0:18:86.96:87,0,264	0/1:31,0:29:99:184,0,624	1/1:9,2:11:23.73:272,24,0	0/1:12,0:11:7.40:98,0,7	0/1:7,0:6:43.46:43,0,55	1/1:12,0:12:36.07:602,36,0	0/1:4,0:4:7.80:60,0,8	0/1:11,0:11:30.93:31,0,207	0/1:17,0:17:46.83:47,0,594	0/1:17,0:17:75.64:76,0,210	0/1:22,0:23:99:120,0,630	1/1:20,8:28:74.05:1005,74,0	1/1:20,10:30:74.10:1144,74,0	0/1:12,2:13:2.96:343,0,3
chr10	15068204	.	GAAGAAAGA	G	2999.73	PASS	AB=1.000;AC=25;AF=0.446;AN=56;BaseQRankSum=3.725;DP=449;FS=5.689;HRun=0;HaplotypeScore=271.9000;InbreedingCoeff=0.5474;MQ=32.36;MQ0=3;MQRankSum=-1.339;QD=12.82;ReadPosRankSum=-2.786;VQSLOD=1.8336;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:26:42.98:0,43,727	1/1:8,0:8:1.38:63,1,0	0/0:9,0:6:18.06:0,18,496	0/0:5,0:5:9.33:0,9,382	0/1:16,0:16:1.49:34,0,1	1/1:13,0:13:9.14:58,9,0	0/0:5,0:5:1.59:0,2,4	0/1:34,0:33:15.64:16,0,166	1/1:16,0:16:13.90:236,14,0	1/1:6,0:6:7:97,7,0	0/1:23,0:23:16.47:229,0,16	0/0:27,0:27:23.48:0,23,914	0/0:14,0:14:33.82:0,34,827	0/0:15,0:14:11.97:0,12,336	0/0:20,0:16:20.26:0,20,343	0/0:29,0:27:39.75:0,40,871	1/1:12,0:12:6.70:122,7,0	0/0:12,0:11:9.37:0,9,80	1/1:5,2:6:6.02:120,6,0	1/1:4,9:13:39.13:859,39,0	1/1:0,2:2:6.02:107,6,0	0/0:10,0:10:12.73:0,13,245	0/0:18,0:18:18.82:0,19,789	0/1:15,0:15:0.07:0,0,191	0/0:23,0:23:31.90:0,32,731	1/1:26,0:26:25.72:516,26,0	1/1:28,0:28:6.25:585,6,0	0/1:15,0:14:67.57:147,0,68
chr10	15068208	.	A	AAAGGAAGG	17361.42	PASS	AB=0.975;AC=47;AF=0.839;AN=56;BaseQRankSum=-0.783;DP=456;FS=39.130;HRun=0;HaplotypeScore=234.9070;InbreedingCoeff=0.1744;MQ=34.87;MQ0=3;MQRankSum=-2.049;QD=38.93;ReadPosRankSum=2.153;VQSLOD=2.9955;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:25:21.98:611,22,0	1/1:8,0:8:21.07:437,21,0	0/0:10,0:7:18.06:0,18,340	0/1:5,0:6:1.16:1,0,287	0/1:16,0:16:10.51:129,0,11	1/1:14,0:14:8.13:137,8,0	0/1:6,0:6:6.70:49,0,7	1/1:37,0:36:99:1675,105,0	1/1:16,0:16:18.95:658,19,0	1/1:8,0:8:18.06:377,18,0	1/1:19,0:19:53.85:973,54,0	0/1:28,0:28:7.16:622,0,7	1/1:10,3:14:40.66:826,41,0	1/1:12,3:14:30.08:539,30,0	1/1:19,5:20:50.95:962,51,0	1/1:18,10:26:72.20:2103,72,0	0/1:11,0:11:7.85:390,0,8	1/1:7,3:9:27.09:650,27,0	0/1:6,0:5:12.15:12,0,26	1/1:14,0:14:7.92:184,8,0	1/1:2,0:2:5.55:29,6,0	1/1:9,0:9:21.06:251,21,0	1/1:12,6:18:48.09:1158,48,0	1/1:12,3:15:33.08:492,33,0	1/1:23,1:24:63.19:944,63,0	1/1:27,0:27:71.88:1294,72,0	0/1:28,1:29:13.16:1268,0,13	1/1:15,0:14:18.62:591,19,0
chr10	15068229	.	A	ATCTT	28424.02	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=2.662;DP=514;FS=3.414;HRun=0;HaplotypeScore=199.5084;InbreedingCoeff=0.9292;MQ=45.17;MQ0=4;MQRankSum=-6.049;QD=57.77;ReadPosRankSum=3.075;VQSLOD=5.9472;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,13:26:42.06:964,42,0	1/1:3,7:10:27.02:582,27,0	0/0:13,0:12:9.52:0,10,433	0/0:9,0:9:20.91:0,21,258	1/1:5,21:27:63.17:1570,63,0	1/1:3,18:21:57.15:1442,57,0	1/1:0,11:11:30.06:719,30,0	1/1:10,27:38:84.27:2086,84,0	1/1:5,11:15:42.06:952,42,0	1/1:4,12:16:42.10:1046,42,0	1/1:3,15:18:48.16:1224,48,0	1/1:8,10:18:45.14:1036,45,0	1/1:5,9:14:30.07:720,30,0	1/1:6,17:21:39.05:909,39,0	1/1:4,13:17:45.11:1113,45,0	1/1:11,18:28:66.22:1703,66,0	1/1:2,7:9:21.07:553,21,0	1/1:5,7:12:27.09:679,27,0	1/1:3,8:9:18.06:435,18,0	1/1:3,16:19:57.20:1485,57,0	1/1:1,3:4:8.99:137,9,0	1/1:4,7:11:30.04:664,30,0	1/1:3,15:17:39.13:983,39,0	1/1:3,8:11:18.20:416,18,0	1/1:3,23:27:69.19:1756,69,0	1/1:10,20:30:72.20:1774,72,0	1/1:12,22:35:87.25:2116,87,0	1/1:5,15:20:54.16:1361,54,0
chr10	15068234	.	T	TC	5143.80	PASS	AB=0.965;AC=29;AF=0.518;AN=56;BaseQRankSum=10.873;DP=482;FS=4.024;HRun=0;HaplotypeScore=227.0068;InbreedingCoeff=-0.5859;MQ=48.99;MQ0=4;MQRankSum=-7.572;QD=11.23;ReadPosRankSum=10.467;VQSLOD=4.4503;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:21,1:21:99:197,0,130	0/1:11,1:12:64.15:119,0,64	0/0:15,0:14:38.57:0,39,453	0/0:9,0:9:21.89:0,22,244	0/1:25,0:25:6.77:281,0,7	0/1:22,0:22:56.84:205,0,57	0/1:13,0:13:75.90:155,0,76	0/1:34,0:34:99:431,0,112	0/1:15,1:15:41.03:234,0,41	0/1:18,2:20:24.09:107,0,24	1/1:16,1:17:47.35:439,47,0	0/1:15,2:17:57.39:206,0,57	0/1:12,0:12:76.80:116,0,77	0/1:20,0:19:47.73:127,0,48	0/1:16,0:16:24.31:160,0,24	1/1:19,3:22:38.21:363,38,0	1/1:7,0:7:17.83:88,18,0	0/1:9,0:9:48.44:48,0,57	0/1:9,0:7:43.18:43,0,57	0/1:18,1:19:5.57:333,0,6	0/1:3,1:4:27.34:31,0,27	0/1:12,1:13:99:130,0,114	0/1:18,0:17:25.61:207,0,26	0/1:9,0:9:7.53:106,0,8	0/1:26,0:26:2.32:326,0,2	0/1:24,2:26:42.28:219,0,42	0/1:31,1:32:90.04:295,0,90	0/1:18,0:18:77.42:177,0,77
chr10	15068252	.	T	TAGACAGAC	10971.32	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-6.379;DP=563;FS=2.913;HRun=0;HaplotypeScore=255.3094;InbreedingCoeff=0.9541;MQ=50.86;MQ0=5;MQRankSum=-8.335;QD=45.71;ReadPosRankSum=-0.952;VQSLOD=4.5034;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:22:45.15:0,45,1133	1/1:8,3:11:12.04:480,12,0	0/0:21,0:19:18.53:0,19,413	0/0:15,0:12:17.23:0,17,288	0/0:30,0:30:60.21:0,60,1511	0/0:25,0:25:36.12:0,36,893	0/0:23,0:23:42.10:0,42,862	1/1:39,0:39:39.03:1076,39,0	1/1:9,8:17:21.07:862,21,0	1/1:15,9:25:48.16:1907,48,0	1/1:13,2:15:9.03:338,9,0	0/0:22,0:22:51.16:0,51,1234	0/0:19,0:19:45.15:0,45,1114	0/0:14,0:13:21.07:0,21,503	0/0:5,0:19:39.13:0,39,709	0/0:7,0:19:30.10:0,30,559	1/1:9,2:12:18.04:495,18,0	0/0:5,0:12:18.06:0,18,335	1/1:12,2:13:22.87:645,23,0	1/1:13,8:21:15.05:616,15,0	1/1:7,1:8:2.99:24,3,0	0/0:17,0:17:39.13:0,39,922	0/0:19,0:18:36.11:0,36,830	0/0:15,0:15:27.09:0,27,633	0/0:29,0:29:54.17:0,54,1309	1/1:17,8:25:36.11:1336,36,0	1/1:18,16:35:54.19:2205,54,0	1/1:7,9:16:24.08:986,24,0
chr10	15070588	.	GA	G	6966.77	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=8.468;DP=675;FS=0.000;HRun=2;HaplotypeScore=79.1344;InbreedingCoeff=0.9999;MQ=87.00;MQ0=0;MQRankSum=-2.466;QD=35.54;ReadPosRankSum=3.493;VQSLOD=5.3043;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,43:43:99:1519,117,0	0/0:12,0:12:33.08:0,33,459	0/0:19,0:19:51.14:0,51,717	0/0:26,0:26:68.79:0,69,934	0/0:19,0:19:57.07:0,57,778	0/0:19,0:19:57.18:0,57,836	0/0:27,0:27:75.25:0,75,1124	0/0:28,0:28:78.26:0,78,1151	0/0:19,0:19:57.16:0,57,813	0/0:18,0:18:54.18:0,54,792	0/0:12,0:12:33.10:0,33,473	1/1:0,19:19:54.18:698,54,0	1/1:0,19:19:57.19:740,57,0	1/1:0,35:35:93.30:1207,93,0	0/0:36,0:35:99:0,105,1513	0/0:29,0:29:87.28:0,87,1284	0/0:22,0:22:66.21:0,66,969	0/0:28,0:28:81.20:0,81,1147	0/0:25,0:25:75.20:0,75,1024	0/0:22,0:22:66.22:0,66,987	0/0:37,0:37:99:0,102,1505	1/1:0,16:16:39.13:506,39,0	1/1:0,20:20:60.20:779,60,0	1/1:0,27:27:75.24:974,75,0	1/1:1,16:17:42.14:545,42,0	0/0:32,0:32:93.26:0,93,1300	0/0:33,0:33:99:0,99,1483	0/0:16,0:16:45.15:0,45,670
chr10	15071311	.	AC	A	2824.33	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=7.762;DP=543;FS=5.359;HRun=7;HaplotypeScore=52.9619;InbreedingCoeff=0.9825;MQ=83.29;MQ0=0;MQRankSum=-0.576;QD=24.14;ReadPosRankSum=1.487;VQSLOD=4.0924;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:69.19:0,69,840	0/0:3,0:3:9.03:0,9,113	0/0:18,0:18:45.14:0,45,551	0/0:21,0:21:51.11:0,51,608	1/1:0,15:15:36.08:367,36,0	1/1:1,17:18:45.10:459,45,0	1/1:2,25:27:69.16:704,69,0	0/0:25,0:24:66.20:0,66,817	0/0:24,0:24:63.17:0,63,775	0/0:16,0:15:36.11:0,36,451	0/0:18,0:18:51.16:0,51,627	0/0:23,0:23:57.15:0,57,691	0/0:8,0:8:21.07:0,21,264	0/0:17,0:17:42.08:0,42,498	0/0:34,0:34:93.21:0,93,1130	0/0:32,0:31:81.26:0,81,1015	0/0:25,0:24:60.16:0,60,734	0/0:16,0:16:45.14:0,45,566	1/1:1,19:20:57.07:563,57,0	1/1:1,7:8:15.03:153,15,0	1/1:0,29:29:75.17:765,75,0	0/0:13,0:13:36.11:0,36,440	0/0:8,0:8:21.06:0,21,256	0/0:23,0:23:63.20:0,63,793	0/0:25,0:25:60.16:0,60,718	0/0:20,0:20:42.13:0,42,517	0/0:16,0:16:48.11:0,48,585	0/0:10,0:9:21.01:0,21,234
chr10	15071469	.	AAAAAACC	A	2401.92	PASS	AB=0.964;AC=25;AF=0.446;AN=56;BaseQRankSum=0.572;DP=582;FS=8.136;HRun=0;HaplotypeScore=208.1046;InbreedingCoeff=-0.5094;MQ=46.39;MQ0=21;MQRankSum=-6.911;QD=5.50;ReadPosRankSum=0.233;VQSLOD=1.1376;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:16,4:19:25.67:398,0,26	0/1:8,0:7:22.92:23,0,23	0/0:35,0:5:14.49:0,14,124	0/0:41,0:10:2.78:0,3,157	0/1:25,0:24:56.22:56,0,109	0/1:7,0:7:5.18:33,0,5	0/1:14,0:12:24.25:24,0,31	0/1:10,0:9:7.38:7,0,20	0/1:8,0:7:5.62:6,0,12	0/1:29,0:24:29.17:159,0,29	0/1:28,0:26:45.95:131,0,46	0/1:15,4:19:92.12:92,0,120	0/1:10,0:10:39.44:39,0,63	0/1:12,1:13:60.93:124,0,61	1/1:22,0:22:4.67:109,5,0	0/1:23,0:22:12.13:90,0,12	0/1:17,0:14:10.51:57,0,11	0/1:7,0:7:12.45:12,0,20	0/0:24,0:23:46.37:0,46,1073	0/0:23,0:23:62.96:0,63,1233	0/0:21,0:19:30.82:0,31,896	0/1:22,5:27:99:336,0,110	0/1:20,3:23:99:207,0,112	0/1:24,1:21:99:185,0,100	0/1:35,1:35:99:108,0,381	0/1:28,0:27:22.42:114,0,22	0/1:20,0:18:25.28:95,0,25	1/1:17,0:16:8.02:154,8,0
chr10	15071470	.	AAAAACC	A	2594.15	PASS	AB=0.991;AC=27;AF=0.482;AN=56;BaseQRankSum=2.905;DP=578;FS=2.840;HRun=0;HaplotypeScore=198.2740;InbreedingCoeff=-0.3076;MQ=46.42;MQ0=21;MQRankSum=-6.931;QD=6.02;ReadPosRankSum=-1.252;VQSLOD=2.7102;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:20,0:19:52.92:213,0,53	0/1:8,0:7:8.55:39,0,9	0/0:35,0:5:12.64:0,13,113	0/0:42,0:10:5.72:0,6,186	0/1:25,0:24:31.98:32,0,136	0/1:7,0:7:7.52:21,0,8	0/1:15,0:12:4.90:5,0,56	0/1:10,0:9:11.31:11,0,23	0/1:8,0:7:3.60:27,0,4	0/1:28,0:23:32.17:223,0,32	0/1:27,0:25:14.78:161,0,15	0/1:18,0:18:43:43,0,97	0/1:10,0:10:46.10:82,0,46	0/1:12,1:13:61.20:114,0,61	1/1:20,1:21:18.41:262,18,0	1/1:23,0:22:29.59:230,30,0	1/1:15,0:12:1.01:90,1,0	0/1:7,0:7:5.65:59,0,6	0/0:24,0:23:28.03:0,28,986	0/0:25,0:25:68.84:0,69,1224	0/0:21,0:19:28.45:0,28,889	0/1:25,2:27:99:249,0,170	0/1:23,0:23:99:135,0,122	0/1:25,0:21:81.67:82,0,161	0/1:35,1:35:11.48:11,0,353	0/1:28,0:27:7.03:223,0,7	0/1:20,0:18:9.75:233,0,10	1/1:17,0:16:12.66:214,13,0
chr10	15071472	.	AAACC	A	5531.99	PASS	AB=1.000;AC=43;AF=0.768;AN=56;BaseQRankSum=5.469;DP=575;FS=3.823;HRun=0;HaplotypeScore=173.2895;InbreedingCoeff=0.4449;MQ=46.22;MQ0=21;MQRankSum=-4.722;QD=11.80;ReadPosRankSum=-1.089;VQSLOD=4.4629;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:19:11.65:156,12,0	1/1:8,0:7:8.86:114,9,0	0/0:35,0:5:10.76:0,11,105	0/1:42,0:10:3.60:4,0,172	0/1:23,0:24:99:159,0,134	1/1:7,0:7:9.41:71,9,0	0/1:13,0:11:57.06:57,0,67	1/1:10,0:9:18.84:117,19,0	1/1:8,0:7:1.88:64,2,0	1/1:28,0:23:33.06:358,33,0	1/1:26,0:24:51.82:322,52,0	1/1:17,0:17:2.22:128,2,0	1/1:10,0:10:10.15:94,10,0	1/1:13,0:13:12.98:120,13,0	1/1:9,10:19:45:649,45,0	1/1:16,8:23:56.86:858,57,0	1/1:15,0:13:19.89:128,20,0	1/1:3,4:7:11.71:142,12,0	0/0:24,0:23:40.56:0,41,653	0/0:25,0:25:53.82:0,54,818	0/0:22,0:20:22.72:0,23,572	0/1:26,0:26:1.33:253,0,1	1/1:23,0:23:18.64:265,19,0	0/1:25,0:21:16.86:160,0,17	1/1:37,0:36:3.91:286,4,0	1/1:27,0:26:55.93:367,56,0	1/1:18,2:18:16.95:350,17,0	1/1:18,0:17:33.74:312,34,0
chr10	15071473	.	AACC	A	7685.52	PASS	AB=0.662;AC=43;AF=0.768;AN=56;BaseQRankSum=5.616;DP=568;FS=4.332;HRun=0;HaplotypeScore=157.6260;InbreedingCoeff=0.6361;MQ=46.13;MQ0=21;MQRankSum=-4.787;QD=18.30;ReadPosRankSum=-1.841;VQSLOD=4.4939;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:19:33.98:240,34,0	1/1:7,1:7:18.54:158,19,0	0/0:35,0:5:11.76:0,12,122	0/0:42,0:10:5.65:0,6,147	0/1:15,10:24:75.25:301,0,75	0/1:2,6:8:33.37:114,0,33	0/1:8,6:11:37.59:131,0,38	1/1:9,1:9:21.01:228,21,0	1/1:8,0:7:4.33:120,4,0	1/1:26,1:22:57.75:567,58,0	1/1:23,3:24:57.55:545,58,0	1/1:17,0:17:33.15:286,33,0	1/1:9,0:9:22.77:167,23,0	1/1:13,0:13:30.11:226,30,0	1/1:17,1:18:34.45:513,34,0	1/1:21,3:23:43.04:655,43,0	1/1:14,1:13:21.55:194,22,0	1/1:6,0:6:12.03:138,12,0	0/0:23,0:22:29.56:0,30,447	0/0:26,0:26:51.15:0,51,596	0/0:22,0:20:22.61:0,23,412	1/1:26,0:26:42.03:366,42,0	1/1:23,0:23:46.54:404,47,0	1/1:25,0:21:28.93:310,29,0	1/1:36,0:36:70.04:641,70,0	1/1:23,1:23:61.81:550,62,0	1/1:20,0:18:36.29:437,36,0	1/1:17,0:16:36.85:394,37,0
chr10	15071474	.	ACC	A	9742.07	PASS	AB=1.000;AC=44;AF=0.786;AN=56;BaseQRankSum=4.868;DP=559;FS=12.897;HRun=2;HaplotypeScore=140.4224;InbreedingCoeff=0.5707;MQ=46.23;MQ0=23;MQRankSum=-6.142;QD=21.41;ReadPosRankSum=-0.607;VQSLOD=1.7349;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:18,1:18:43.71:379,44,0	1/1:4,2:7:20.87:229,21,0	0/0:35,0:5:11.72:0,12,117	0/1:43,0:10:4.57:5,0,109	0/1:25,0:24:99:155,0,130	0/1:8,0:8:32.79:64,0,33	0/1:13,0:10:63.74:64,0,91	1/1:3,5:7:21.07:306,21,0	1/1:3,5:7:4.52:187,5,0	1/1:12,15:22:48.61:768,49,0	1/1:9,14:23:58.06:769,58,0	1/1:13,5:17:41.51:427,42,0	1/1:8,1:9:23.99:252,24,0	1/1:10,2:12:32.54:313,33,0	1/1:17,1:18:18.78:447,19,0	1/1:18,6:23:36.16:557,36,0	1/1:9,6:13:21.72:332,22,0	1/1:4,2:6:12.04:156,12,0	0/0:21,0:20:29.20:0,29,267	0/0:25,0:26:45.40:0,45,360	0/0:22,0:20:22.06:0,22,254	1/1:24,2:26:55.74:496,56,0	1/1:20,2:22:53.18:558,53,0	1/1:23,1:20:51.30:500,51,0	1/1:31,5:35:87.52:988,88,0	1/1:13,12:23:65.67:833,66,0	1/1:14,3:17:19.38:513,19,0	1/1:8,7:16:36.99:445,37,0
chr10	15071475	.	CCAA	C	2481.23	PASS	AB=0.931;AC=24;AF=0.429;AN=56;BaseQRankSum=3.786;DP=560;FS=4.642;HRun=0;HaplotypeScore=172.2501;InbreedingCoeff=-0.3104;MQ=46.20;MQ0=23;MQRankSum=-8.718;QD=6.93;ReadPosRankSum=-3.930;VQSLOD=2.0450;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:18:13.71:0,14,153	0/1:7,1:7:14.13:76,0,14	0/0:35,0:5:9.94:0,10,89	0/0:43,0:10:1.89:0,2,162	0/1:24,0:24:99:118,0,308	0/1:8,0:8:51.41:51,0,67	0/1:13,0:10:47.41:47,0,135	0/1:7,1:7:1.24:94,0,1	0/1:7,1:7:21.01:68,0,21	0/1:19,8:22:32.29:255,0,32	0/1:22,3:23:16.23:223,0,16	0/1:18,0:17:14.26:14,0,119	0/1:9,0:9:2.25:2,0,59	0/1:12,0:12:18.14:18,0,87	0/1:18,0:18:8.90:188,0,9	1/1:24,0:23:17.56:238,18,0	0/1:12,3:13:18.73:91,0,19	0/1:7,0:7:15.04:38,0,15	0/0:21,0:20:58.48:0,58,919	0/0:26,0:26:74.51:0,75,1161	0/0:22,0:20:47.37:0,47,798	0/1:23,0:26:57.17:57,0,182	0/1:22,0:22:36.38:36,0,134	0/1:22,0:20:7.91:8,0,240	0/0:35,0:35:20:0,20,347	0/1:19,6:23:9.61:384,0,10	1/1:13,6:17:0.74:342,1,0	1/1:12,5:16:4.23:290,4,0
chr10	15071479	.	A	AC	1322.41	PASS	AB=0.985;AC=17;AF=0.304;AN=56;BaseQRankSum=0.513;DP=611;FS=9.822;HRun=0;HaplotypeScore=181.9196;InbreedingCoeff=0.6433;MQ=45.35;MQ0=25;MQRankSum=4.417;QD=6.30;ReadPosRankSum=5.219;VQSLOD=2.5606;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:20,1:20:29.81:73,0,30	0/0:9,0:8:14.83:0,15,121	0/0:35,0:5:11.38:0,11,68	0/0:43,0:10:15.22:0,15,118	0/0:28,0:27:24.51:0,25,413	0/0:9,0:9:0.07:0,0,74	0/1:13,0:9:5.12:5,0,119	0/1:17,0:14:2.43:2,0,123	0/0:10,0:9:7.02:0,7,90	0/0:31,0:26:42.83:0,43,409	0/0:31,0:29:31.44:0,31,349	1/1:15,4:18:10.27:182,10,0	1/1:5,5:10:17.40:217,17,0	1/1:11,1:12:9.40:106,9,0	0/0:20,0:20:48.60:0,49,345	0/0:24,0:23:56.78:0,57,462	0/0:17,0:14:8.87:0,9,126	0/0:7,0:7:14.85:0,15,120	0/0:23,0:21:59.82:0,60,741	0/0:28,0:28:78.21:0,78,1037	0/0:22,0:20:46.62:0,47,585	1/1:26,3:29:4.22:190,4,0	1/1:22,1:23:6.62:145,7,0	1/1:23,1:20:15.39:131,15,0	1/1:38,4:41:56.65:453,57,0	0/0:28,0:26:19.35:0,19,257	0/0:19,0:18:7.80:0,8,203	0/0:16,0:15:18.11:0,18,157
chr10	15071493	.	CA	C	1812.72	PASS	AB=0.753;AC=10;AF=0.179;AN=56;BaseQRankSum=3.535;DP=600;FS=5.851;HRun=6;HaplotypeScore=183.6616;InbreedingCoeff=-0.1621;MQ=41.28;MQ0=20;MQRankSum=-7.575;QD=8.24;ReadPosRankSum=-3.274;VQSLOD=-0.5365;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:23:28.83:0,29,564	0/1:6,2:8:58.28:58,0,108	0/0:17,0:1:0.47:0,0,1	0/1:22,0:7:2.72:3,0,39	0/0:25,0:24:63.20:0,63,807	0/0:9,0:9:18.06:0,18,234	0/0:14,0:10:21.07:0,21,274	0/1:8,5:15:60.75:61,0,181	0/1:6,6:11:55.59:168,0,56	0/1:16,16:26:99:349,0,246	0/1:22,8:28:99:191,0,311	0/0:20,0:18:45.15:0,45,584	0/0:11,0:11:30.10:0,30,393	0/0:14,0:14:36.11:0,36,463	0/0:20,0:20:51.02:0,51,605	0/0:25,0:24:39.54:0,40,603	0/1:13,5:15:99:131,0,121	0/0:7,0:7:15.05:0,15,195	0/0:24,0:20:49.05:0,49,643	0/0:28,0:28:81.25:0,81,1043	0/0:20,0:16:43.69:0,44,555	0/0:29,0:29:57.18:0,57,743	0/0:26,0:26:57.18:0,57,744	0/0:23,0:21:58.99:0,59,738	0/0:44,0:43:99:0,114,1490	0/1:18,17:34:99:499,0,200	0/1:13,11:23:99:303,0,101	0/1:7,7:14:64.33:190,0,64
chr10	15071499	.	AC	A	839.16	PASS	AB=0.929;AC=10;AF=0.179;AN=56;BaseQRankSum=7.339;DP=594;FS=1.378;HRun=1;HaplotypeScore=189.0908;InbreedingCoeff=-0.0015;MQ=42.34;MQ0=17;MQRankSum=-8.776;QD=4.17;ReadPosRankSum=-0.089;VQSLOD=-0.0495;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:23:48.31:0,48,605	0/1:9,1:9:49.31:49,0,50	0/0:12,0:2:5.03:0,5,29	0/0:17,0:5:5.87:0,6,49	0/0:27,0:27:74.96:0,75,861	0/0:11,0:11:23.97:0,24,269	0/0:16,0:12:23.99:0,24,285	0/1:21,0:18:8.02:8,0,196	0/1:12,2:13:54.52:79,0,55	0/1:35,0:28:99:164,0,125	0/1:27,3:27:77.34:116,0,77	0/0:19,0:17:45.14:0,45,579	0/0:11,0:11:30.10:0,30,392	0/0:14,0:14:38.49:0,38,481	0/0:19,0:19:51.03:0,51,606	0/0:23,0:22:30.09:0,30,591	0/1:16,1:13:27.28:50,0,27	0/0:7,0:7:14.99:0,15,161	0/0:23,0:19:36.27:0,36,615	0/0:30,0:30:90.20:0,90,1091	0/0:20,0:17:46.67:0,47,569	0/0:25,0:25:57.13:0,57,728	0/0:27,0:27:59.77:0,60,761	0/0:23,0:22:60.17:0,60,770	0/0:44,0:43:99:0,117,1513	0/1:30,4:32:91.60:260,0,92	0/1:23,3:23:30.07:180,0,30	1/1:13,1:14:11.59:79,12,0
chr10	15071527	.	C	CA	4561.55	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=0.691;DP=581;FS=16.288;HRun=8;HaplotypeScore=191.3705;InbreedingCoeff=0.8889;MQ=44.64;MQ0=10;MQRankSum=-10.314;QD=16.96;ReadPosRankSum=0.887;VQSLOD=2.9268;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:39:0,39,352	1/1:6,6:12:20.01:248,20,0	0/0:6,0:3:9:0,9,82	0/0:4,0:2:6:0,6,52	0/0:27,0:27:77.87:0,78,699	0/0:11,0:11:32.99:0,33,295	0/0:15,0:13:24:0,24,219	1/1:5,12:21:23.38:410,23,0	1/1:5,10:16:13.49:321,13,0	1/1:8,21:33:43.34:688,43,0	1/1:13,9:27:3.78:307,4,0	0/0:15,0:15:41.05:0,41,360	0/0:15,0:15:45.02:0,45,411	0/0:12,0:12:30.01:0,30,274	1/1:16,0:16:11.76:178,12,0	1/1:27,0:27:24.91:212,25,0	1/1:2,9:12:23.68:306,24,0	0/1:7,0:7:5.16:79,0,5	0/0:20,0:18:47.94:0,48,420	0/0:31,0:31:78.01:0,78,708	0/0:21,0:21:39.47:0,39,357	0/0:23,0:23:57.02:0,57,516	0/0:26,0:26:69.03:0,69,631	0/0:25,0:24:50.87:0,51,466	0/0:44,0:41:99:0,117,1070	1/1:6,21:32:43.60:697,44,0	1/1:7,17:28:44:649,44,0	1/1:6,11:18:29.91:468,30,0
chr10	15071535	.	A	AC	2052.74	PASS	AB=0.967;AC=14;AF=0.250;AN=56;BaseQRankSum=5.033;DP=581;FS=16.281;HRun=1;HaplotypeScore=197.5038;InbreedingCoeff=0.0379;MQ=47.66;MQ0=10;MQRankSum=-10.712;QD=7.75;ReadPosRankSum=4.550;VQSLOD=-0.7054;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:48.03:0,48,543	0/1:11,0:11:32.14:65,0,32	0/0:9,0:4:8.94:0,9,95	0/0:5,0:3:5.98:0,6,59	0/0:28,0:28:84.01:0,84,1007	0/0:12,0:12:36.04:0,36,430	0/0:16,0:14:32.89:0,33,330	0/1:23,0:23:99:104,0,117	0/1:20,0:18:77.19:101,0,77	0/1:38,0:33:73.61:168,0,74	0/1:24,0:24:89.54:95,0,90	0/0:18,0:18:50.94:0,51,575	0/0:16,0:16:48.12:0,48,577	0/0:12,0:12:36.08:0,36,422	1/1:9,7:16:24.56:364,25,0	1/1:20,6:26:47.84:531,48,0	0/1:17,0:13:24.56:99,0,25	0/1:4,4:8:39.01:147,0,39	0/0:22,0:20:60.09:0,60,669	0/0:27,0:27:78.24:0,78,991	0/0:20,0:20:52:0,52,602	0/0:21,0:21:57.12:0,57,711	0/0:25,0:25:72.15:0,72,903	0/0:24,0:23:65.48:0,65,725	0/0:44,0:41:99:0,120,1457	0/1:34,0:34:99:213,0,153	0/1:29,0:28:64.59:188,0,65	0/1:19,0:17:13.53:145,0,14
chr10	15071557	.	CAAA	C	6424.46	PASS	AB=0.703;AC=30;AF=0.536;AN=56;BaseQRankSum=-9.120;DP=589;FS=16.042;HRun=12;HaplotypeScore=170.6952;InbreedingCoeff=0.7520;MQ=57.05;MQ0=10;MQRankSum=1.586;QD=18.95;ReadPosRankSum=3.782;VQSLOD=1.6240;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,14:18:31.34:443,31,0	0/0:4,0:12:7.94:0,8,18	0/0:19,0:8:20.79:0,21,243	0/1:14,0:6:1.62:2,0,79	1/1:5,23:29:60.04:737,60,0	1/1:0,11:12:31.68:411,32,0	1/1:0,13:14:26.82:321,27,0	0/0:7,0:21:15.77:0,16,49	0/0:8,0:20:19.58:0,20,66	0/0:16,0:36:44.71:0,45,244	0/0:11,0:22:23.56:0,24,118	1/1:4,11:15:27.04:338,27,0	1/1:3,12:14:33.09:416,33,0	1/1:2,11:13:27.06:340,27,0	1/1:3,15:18:33.10:416,33,0	1/1:4,22:26:56.85:718,57,0	0/0:4,0:12:9.20:0,9,33	1/1:4,7:10:9.02:114,9,0	0/0:9,0:20:24.34:0,24,110	0/0:8,0:28:28.96:0,29,116	0/0:2,0:28:23.67:0,24,51	1/1:2,18:20:41.96:493,42,0	1/1:3,20:23:54.15:682,54,0	0/1:7,15:21:7.24:413,0,7	1/1:10,19:29:42.12:563,42,0	0/1:9,1:28:2.22:2,0,103	0/1:12,1:30:16.04:16,0,59	0/0:8,0:22:23.68:0,24,55
chr10	15071814	.	C	CT	2640.29	PASS	AB=1.000;AC=22;AF=0.393;AN=56;BaseQRankSum=2.403;DP=680;FS=2.919;HRun=6;HaplotypeScore=93.9599;InbreedingCoeff=0.0799;MQ=66.81;MQ0=0;MQRankSum=-0.934;QD=6.55;ReadPosRankSum=1.241;VQSLOD=0.0787;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,108,1073	0/1:10,0:9:22.84:30,0,23	0/0:22,0:21:29.20:0,29,308	0/0:18,0:16:8.42:0,8,131	1/1:1,22:23:51.12:621,51,0	1/1:2,19:21:51.16:640,51,0	1/1:2,23:25:38.71:462,39,0	0/1:30,0:30:50.83:51,0,109	0/1:27,0:27:11.17:124,0,11	0/1:19,0:17:12.76:81,0,13	1/1:20,0:20:31.89:173,32,0	0/0:33,0:33:96.12:0,96,942	0/0:22,0:22:48.08:0,48,483	0/0:29,0:29:83.36:0,83,814	0/1:32,0:32:12.34:95,0,12	0/1:30,0:30:32.58:68,0,33	0/1:24,0:24:42.54:83,0,43	0/0:23,0:23:3.24:0,3,31	1/1:24,0:24:0.09:66,0,0	0/1:24,0:24:2.88:3,0,63	0/1:16,0:16:5.64:6,0,21	0/0:19,0:19:51.06:0,51,507	0/0:13,0:13:21.02:0,21,206	0/0:35,0:35:96.14:0,96,945	0/0:20,0:20:48.03:0,48,476	0/1:28,0:28:54.77:122,0,55	0/1:31,0:31:69.22:115,0,69	0/1:19,0:19:28.53:78,0,29
chr10	15071820	.	T	TG	5109.59	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=-7.935;DP=695;FS=1.875;HRun=8;HaplotypeScore=89.7139;InbreedingCoeff=0.8112;MQ=68.33;MQ0=0;MQRankSum=-1.549;QD=16.98;ReadPosRankSum=0.464;VQSLOD=4.8251;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,114,1014	1/1:4,7:10:4.95:98,5,0	0/0:22,0:22:32.04:0,32,288	0/1:15,0:13:19.89:20,0,96	0/1:24,0:24:0.87:206,0,1	1/1:19,0:19:26.80:186,27,0	0/1:24,0:24:5.61:106,0,6	1/1:7,24:32:74.71:725,75,0	1/1:5,23:29:60.01:672,60,0	1/1:3,18:19:42.06:450,42,0	1/1:4,18:22:36:393,36,0	0/0:37,0:37:95.92:0,96,852	0/0:22,0:22:53.99:0,54,481	0/0:30,0:30:75:0,75,673	0/0:30,0:30:71.60:0,72,622	0/0:31,0:31:75.35:0,75,673	1/1:4,22:26:45.13:519,45,0	0/0:21,0:21:59.94:0,60,532	0/0:25,0:25:63.09:0,63,556	0/0:26,0:26:68.61:0,69,608	0/0:16,0:16:44.62:0,45,394	0/0:19,0:19:48.04:0,48,452	0/0:12,0:12:26.83:0,27,220	0/0:35,0:35:86.99:0,87,781	0/0:22,0:22:50.92:0,51,451	1/1:5,23:28:38.72:679,39,0	1/1:7,25:32:63.05:693,63,0	1/1:4,14:18:33.05:365,33,0
chr10	15072086	.	T	TGTCTGACAGGGTCTGACAGG	61907.32	PASS	AB=0.593;AC=45;AF=0.804;AN=56;BaseQRankSum=-4.580;DP=543;FS=19.793;HRun=0;HaplotypeScore=241.0242;InbreedingCoeff=0.8392;MQ=42.36;MQ0=3;MQRankSum=-8.553;QD=139.12;ReadPosRankSum=3.232;VQSLOD=2.9748;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,3:24:36.03:2210,36,0	1/1:5,3:9:18.02:1176,18,0	0/0:25,0:13:36.10:0,36,967	0/0:21,0:14:15.66:0,16,1346	1/1:11,5:19:15.52:1442,16,0	1/1:11,1:12:18.02:1009,18,0	1/1:12,3:18:36.12:2785,36,0	1/1:43,0:39:63.27:4976,63,0	1/1:7,5:17:33.11:2944,33,0	1/1:10,2:20:45.29:3258,45,0	1/1:4,9:23:27.56:2597,28,0	1/1:8,6:15:39.07:2783,39,0	1/1:5,9:18:39.13:3446,39,0	1/1:6,6:13:24.01:1778,24,0	1/1:10,16:30:63.17:5381,63,0	1/1:9,8:21:51.14:3986,51,0	1/1:11,5:24:30.06:2277,30,0	0/1:5,5:16:99:2013,0,192	0/0:13,0:11:33.02:0,33,1109	0/0:28,0:28:48.16:0,48,2708	0/0:11,0:11:29.80:0,30,1127	1/1:5,4:10:14.98:1172,15,0	1/1:5,3:11:8.22:1090,8,0	1/1:5,4:12:5.95:576,6,0	1/1:8,9:23:42.14:3566,42,0	1/1:10,8:27:72.16:5344,72,0	1/1:8,9:29:51.13:4049,51,0	1/1:5,4:10:27.09:2048,27,0
chr10	15072101	.	TAAACAAAC	T	2914.97	PASS	AB=0.857;AC=46;AF=0.885;AN=52;BaseQRankSum=4.179;DP=389;FS=1.480;HRun=0;HaplotypeScore=213.7328;InbreedingCoeff=0.3151;MQ=37.98;MQ0=9;MQRankSum=0.184;QD=8.78;ReadPosRankSum=3.351;VQSLOD=2.6883;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:10,0:9:9.03:125,9,0	1/1:7,0:7:6.02:128,6,0	0/0:26,0:14:15.03:0,15,267	0/0:20,0:12:3.01:0,3,59	1/1:13,0:13:1.56:15,2,0	1/1:8,0:8:3.01:56,3,0	./.	0/1:21,14:32:16.90:446,0,17	1/1:8,0:8:8.83:54,9,0	1/1:9,0:9:5.16:82,5,0	1/1:20,0:20:8.15:58,8,0	1/1:7,0:7:6.02:90,6,0	1/1:12,0:12:3.01:36,3,0	1/1:9,0:9:11.77:156,12,0	1/1:20,0:20:3.01:56,3,0	1/1:14,0:14:11.93:149,12,0	1/1:17,0:17:9.02:103,9,0	1/1:13,0:12:5.89:56,6,0	1/1:12,0:9:15.05:238,15,0	1/1:29,0:29:23.94:255,24,0	1/1:8,0:8:5.98:70,6,0	1/1:9,0:8:6.02:87,6,0	./.	0/1:5,0:5:0:0,0,0	1/1:15,0:15:11.97:126,12,0	1/1:21,0:21:23.97:331,24,0	1/1:23,0:23:8.94:116,9,0	1/1:8,0:8:14.92:203,15,0
chr10	15072121	.	CAAACAAACAAACAAACAAATAAAT	C	4085.06	PASS	AB=1.000;AC=29;AF=0.558;AN=52;BaseQRankSum=4.389;DP=326;FS=4.962;HRun=0;HaplotypeScore=222.5205;InbreedingCoeff=0.0483;MQ=35.63;MQ0=10;MQRankSum=-1.475;QD=18.08;ReadPosRankSum=5.804;VQSLOD=2.1209;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:3,0:5:11.97:340,12,0	0/1:8,0:8:51.24:142,0,51	0/0:19,0:9:27.07:0,27,731	0/0:11,0:5:11.95:0,12,188	1/1:6,4:10:13.01:231,13,0	1/1:0,8:8:3.01:196,3,0	./.	0/0:35,0:27:2.18:0,2,410	0/0:7,0:7:13.04:0,13,77	0/1:9,0:9:52.27:62,0,52	0/1:19,0:19:5.10:5,0,178	1/1:5,0:6:8.98:265,9,0	1/1:7,0:7:8.89:107,9,0	1/1:4,0:6:14.91:454,15,0	0/1:15,0:15:72.93:161,0,73	0/1:11,0:11:4.06:378,0,4	0/0:18,0:17:18.27:0,18,183	0/1:10,0:9:13.09:36,0,13	0/1:16,0:12:41.66:282,0,42	0/1:28,0:28:29.98:206,0,30	0/0:5,0:5:5.84:0,6,39	1/1:4,0:6:11.95:290,12,0	./.	1/1:1,0:1:2.92:17,3,0	1/1:10,0:12:21.07:457,21,0	0/1:16,0:16:99:192,0,119	0/1:19,0:19:64.55:65,0,94	0/1:13,0:11:43.81:200,0,44
chr10	15072129	.	CAAACAAACAAATAAATAAATAAATAAAT	C	5460.15	PASS	AB=0.914;AC=32;AF=0.615;AN=52;BaseQRankSum=3.983;DP=295;FS=26.005;HRun=0;HaplotypeScore=208.5983;InbreedingCoeff=-0.1300;MQ=36.53;MQ0=8;MQRankSum=0.765;QD=20.92;ReadPosRankSum=1.587;VQSLOD=2.5019;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:10,0:9:26.67:429,27,0	0/1:4,0:7:41.84:101,0,42	0/0:15,0:7:15.03:0,15,267	0/0:6,0:2:3.01:0,3,59	0/0:9,0:9:2.94:0,3,219	1/1:8,0:8:3.01:89,3,0	0/0:2,0:2:2.94:0,3,18	0/1:30,0:22:99:438,0,143	0/1:7,0:7:55.93:56,0,56	0/1:6,0:7:52.19:52,0,63	0/1:14,0:16:33.45:33,0,123	1/1:4,0:4:11.90:260,12,0	1/1:5,0:5:3.01:36,3,0	1/1:6,0:6:14.88:459,15,0	0/1:8,0:8:13.37:100,0,13	0/1:9,0:9:7.98:233,0,8	0/1:17,0:17:38.07:38,0,377	0/1:9,0:8:26.98:69,0,27	1/1:6,13:16:39.06:913,39,0	1/1:1,27:28:42:927,42,0	1/1:4,0:4:8.99:159,9,0	1/1:5,0:5:9.03:254,9,0	./.	./.	1/1:13,0:13:20.71:354,21,0	0/1:10,0:13:42.23:241,0,42	0/1:18,0:19:73.94:74,0,220	0/1:12,0:13:99:144,0,203
chr10	15073095	.	T	TA	2218.24	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-10.683;DP=535;FS=1.500;HRun=10;HaplotypeScore=55.8975;InbreedingCoeff=0.9698;MQ=79.77;MQ0=3;MQRankSum=-2.121;QD=20.35;ReadPosRankSum=2.405;VQSLOD=4.6203;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,138,1128	0/0:6,0:6:14.97:0,15,123	0/0:35,1:26:28.47:0,28,243	0/0:17,0:12:13.40:0,13,124	1/1:5,15:20:42.11:448,42,0	1/1:3,11:14:11.42:327,11,0	1/1:3,19:22:32.26:435,32,0	0/0:26,0:26:62.88:0,63,513	0/0:14,0:14:38.94:0,39,317	0/0:20,0:20:41.90:0,42,338	0/0:18,0:18:44.94:0,45,369	0/0:17,0:17:41.93:0,42,345	0/0:15,0:15:41.94:0,42,345	0/0:19,0:19:50.83:0,51,401	1/1:3,14:17:30.08:319,30,0	1/1:3,11:14:8.47:295,8,0	0/0:30,0:30:86.90:0,87,714	1/1:1,21:22:54.14:576,54,0	0/0:26,0:26:59.88:0,60,492	0/0:9,0:9:23.97:0,24,196	0/0:19,0:19:50.90:0,51,413	0/0:8,0:8:20.98:0,21,172	0/0:14,0:14:32.94:0,33,271	0/0:13,0:13:35.96:0,36,296	0/0:18,0:18:47.92:0,48,389	0/0:19,0:19:53.92:0,54,442	0/0:21,0:21:53.90:0,54,440	0/0:12,0:12:32.96:0,33,271
chr10	15073708	.	T	TACAC	2324.28	PASS	AB=0.854;AC=30;AF=0.577;AN=52;BaseQRankSum=-2.423;DP=542;FS=2.504;HRun=0;HaplotypeScore=95.2170;InbreedingCoeff=0.2933;MQ=58.85;MQ0=9;MQRankSum=-0.802;QD=6.30;ReadPosRankSum=-0.165;VQSLOD=1.7073;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:33:30.08:0,30,424	1/1:6,6:13:8.57:159,9,0	./.	0/1:24,0:9:0:0,0,0	1/1:14,0:14:3.01:47,3,0	1/1:23,0:23:5.83:97,6,0	1/1:25,0:25:5.95:60,6,0	1/1:18,0:17:9.28:56,9,0	1/1:11,5:16:6.02:140,6,0	1/1:13,3:19:9.01:136,9,0	1/1:5,1:8:3.01:69,3,0	0/0:17,0:17:18.06:0,18,270	0/0:18,0:18:15.01:0,15,206	0/0:14,0:13:9:0,9,97	1/1:15,6:22:8.77:153,9,0	0/1:15,7:22:74.29:263,0,74	0/1:17,2:18:25.40:240,0,25	0/1:12,5:17:79.57:130,0,80	0/1:9,0:9:21.54:22,0,38	0/1:10,0:13:5.34:8,0,5	0/1:37,0:38:12.02:114,0,12	0/0:17,0:17:12.02:0,12,146	./.	0/0:27,0:30:9.02:0,9,120	0/0:19,0:19:18.04:0,18,238	1/1:22,0:21:27.08:425,27,0	1/1:23,0:23:11.97:161,12,0	0/1:11,4:19:28.67:217,0,29
chr10	15077815	.	C	CA	1037.45	PASS	AB=0.770;AC=20;AF=0.357;AN=56;BaseQRankSum=-2.287;DP=581;FS=7.473;HRun=16;HaplotypeScore=79.5331;InbreedingCoeff=0.0202;MQ=51.49;MQ0=27;MQRankSum=-1.068;QD=3.12;ReadPosRankSum=-0.782;VQSLOD=-0.1941;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:25,30:54:36.60:263,0,37	0/0:8,0:10:11.37:0,11,48	1/1:6,0:4:4.23:15,4,0	0/1:5,0:4:0.13:0,0,6	0/1:13,5:18:21.23:37,0,21	1/1:5,15:22:10.08:149,10,0	0/1:11,7:19:13.68:96,0,14	0/0:16,0:33:25.80:0,26,84	0/0:9,0:22:13.06:0,13,38	0/0:7,0:12:14.18:0,14,41	0/0:7,0:12:4.62:0,5,22	0/1:17,2:18:2.70:121,0,3	1/1:11,8:18:5.61:38,6,0	0/1:10,5:17:12.21:30,0,12	0/1:13,14:29:20.32:128,0,20	0/1:16,6:21:27.82:28,0,62	0/0:16,0:26:23.12:0,23,75	0/1:12,8:19:26.17:72,0,26	0/0:25,0:27:30.49:0,30,162	0/0:18,0:16:13.59:0,14,93	0/0:23,0:24:24.31:0,24,137	0/1:20,2:21:37.26:63,0,37	0/1:11,5:16:10.92:19,0,11	0/1:13,11:22:14.79:69,0,15	1/1:9,3:11:0.82:75,1,0	0/0:12,0:17:15.62:0,16,58	0/0:6,0:20:27.19:0,27,101	0/0:8,0:10:6.91:0,7,28
chr10	15078111	.	T	TTGG	498.12	PASS	AB=0.755;AC=8;AF=0.143;AN=56;BaseQRankSum=5.883;DP=586;FS=18.866;HRun=0;HaplotypeScore=121.3972;InbreedingCoeff=0.0322;MQ=77.37;MQ0=0;MQRankSum=-3.095;QD=3.86;ReadPosRankSum=-3.191;VQSLOD=0.4664;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,99,1660	0/0:4,0:9:2.99:0,3,24	0/0:18,0:19:51.05:0,51,656	0/0:13,0:13:35.94:0,36,436	0/0:4,0:12:28.87:0,29,162	0/0:5,0:18:23.26:0,23,152	0/0:10,0:29:35.97:0,36,432	0/1:13,0:16:20.44:20,0,144	0/1:13,1:21:58.59:59,0,88	0/0:9,0:9:13.73:0,14,138	1/1:6,0:9:3.45:37,3,0	0/0:26,0:26:63.09:0,63,1036	0/0:21,0:21:60.13:0,60,978	0/0:17,0:17:45.08:0,45,765	0/0:14,0:34:70.76:0,71,645	0/0:13,0:26:35.18:0,35,309	0/1:23,0:29:66.03:315,0,66	0/0:12,0:30:27.07:0,27,352	0/0:17,0:17:45.02:0,45,619	0/0:30,0:30:72.16:0,72,1196	0/0:19,0:21:57.09:0,57,844	0/0:18,0:18:39.02:0,39,597	0/0:14,0:14:36.10:0,36,655	0/0:33,0:34:99:0,99,1547	0/0:22,0:22:60.11:0,60,964	0/1:7,0:10:52.69:53,0,57	0/1:15,1:30:29.90:86,0,30	0/1:8,0:14:50.61:62,0,51
chr10	15080072	.	CTT	C	7388.08	PASS	AB=0.923;AC=41;AF=0.732;AN=56;BaseQRankSum=-2.360;DP=631;FS=5.150;HRun=12;HaplotypeScore=132.4364;InbreedingCoeff=0.9079;MQ=58.24;MQ0=18;MQRankSum=-4.278;QD=17.51;ReadPosRankSum=1.847;VQSLOD=3.4436;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:11,16:27:19.01:388,19,0	1/1:1,6:7:21.01:204,21,0	0/0:57,0:21:23.80:0,24,253	0/0:54,0:21:34.29:0,34,323	0/0:15,0:24:50.78:0,51,349	0/0:4,0:12:23.44:0,23,126	0/0:6,0:22:25.45:0,25,102	1/1:12,18:29:53.99:536,54,0	1/1:2,11:14:30.05:356,30,0	1/1:5,7:11:0.28:162,0,0	1/1:9,13:22:47.52:449,48,0	1/1:7,19:25:60.08:598,60,0	1/1:7,16:24:48.03:477,48,0	1/1:8,8:16:23.31:275,23,0	1/1:5,0:25:46.50:202,47,0	1/1:8,1:27:55.38:267,55,0	1/1:9,14:19:33.02:335,33,0	1/1:6,0:19:30.65:131,31,0	0/0:17,0:16:39.06:0,39,517	0/0:21,0:22:60.52:0,61,786	0/1:10,1:12:0.46:0,0,333	1/1:5,16:20:47.98:474,48,0	1/1:5,12:16:30.74:307,31,0	1/1:0,12:13:36.08:366,36,0	1/1:7,12:19:39.97:436,40,0	1/1:3,14:17:41.66:406,42,0	1/1:1,19:19:54.11:548,54,0	1/1:11,14:24:49.81:470,50,0
chr10	15080083	.	TTC	T	1996.57	PASS	AB=0.983;AC=25;AF=0.446;AN=56;BaseQRankSum=1.784;DP=620;FS=0.709;HRun=0;HaplotypeScore=150.4614;InbreedingCoeff=0.3554;MQ=49.73;MQ0=23;MQRankSum=0.038;QD=5.89;ReadPosRankSum=5.118;VQSLOD=2.6198;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:32,2:31:48.01:178,0,48	0/1:7,0:7:0.82:33,0,1	0/0:46,0:11:23.35:0,23,220	0/0:49,0:18:23.99:0,24,336	0/0:27,0:27:44.97:0,45,339	0/0:14,0:14:34.57:0,35,235	0/0:20,0:17:29.29:0,29,170	0/1:28,0:27:58.46:58,0,101	0/1:17,0:17:33.53:73,0,34	1/1:8,0:7:12.47:47,12,0	1/1:20,1:21:1.26:213,1,0	1/1:24,0:23:33.66:204,34,0	1/1:22,0:22:26.22:183,26,0	0/1:17,1:17:64.01:98,0,64	0/0:22,0:20:34.39:0,34,105	0/0:26,0:26:42.66:0,43,159	0/1:20,0:17:25.09:69,0,25	0/0:18,0:16:29.49:0,29,115	0/0:25,0:24:59.83:0,60,709	0/0:22,0:22:47.03:0,47,776	0/0:12,0:12:19.57:0,20,393	1/1:20,0:19:15.12:199,15,0	1/1:17,0:16:7.19:134,7,0	0/1:16,0:16:1.30:73,0,1	0/1:19,1:19:7.33:151,0,7	0/1:20,0:20:46.60:102,0,47	1/1:22,0:21:18.39:164,18,0	1/1:24,1:23:4.64:208,5,0
chr10	15080091	.	CT	C	6015.36	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=1.764;DP=586;FS=2.153;HRun=8;HaplotypeScore=120.1427;InbreedingCoeff=0.9493;MQ=45.16;MQ0=25;MQRankSum=-4.576;QD=15.42;ReadPosRankSum=5.407;VQSLOD=4.2254;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:12,18:27:32.05:315,32,0	1/1:2,5:6:15.02:145,15,0	0/0:30,1:8:4.35:0,4,28	0/0:40,0:15:12.61:0,13,78	0/0:29,0:29:49.03:0,49,544	0/0:17,0:17:42.52:0,43,467	0/0:24,0:21:39.04:0,39,436	1/1:13,15:26:39.02:376,39,0	1/1:2,15:17:42.07:405,42,0	1/1:2,6:7:18.02:173,18,0	1/1:10,13:22:32.90:316,33,0	1/1:7,15:21:36.03:347,36,0	1/1:5,15:20:38.97:367,39,0	1/1:6,10:15:33:301,33,0	1/1:9,13:19:33.04:317,33,0	1/1:5,18:23:48.06:456,48,0	1/1:6,13:18:36.04:343,36,0	1/1:6,16:20:26.33:259,26,0	0/0:23,0:22:54.16:0,54,646	0/0:20,0:20:44.86:0,45,461	0/0:11,0:11:9.03:0,9,106	1/1:5,15:19:29.63:288,30,0	1/1:6,13:17:17.93:171,18,0	1/1:6,8:15:11.38:115,11,0	1/1:8,12:19:29.88:289,30,0	1/1:6,14:20:38.89:373,39,0	1/1:3,17:19:42.05:403,42,0	1/1:10,9:17:24.27:256,24,0
chr10	15080972	.	AG	A	6897.16	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=16.351;DP=729;FS=0.000;HRun=6;HaplotypeScore=124.5512;InbreedingCoeff=0.9966;MQ=83.68;MQ0=1;MQRankSum=-2.202;QD=29.48;ReadPosRankSum=2.238;VQSLOD=3.5829;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,45:46:99:1451,135,0	0/0:12,0:12:36.12:0,36,473	0/0:28,0:28:65.45:0,65,841	0/0:31,0:30:38:0,38,807	0/0:12,0:12:21.07:0,21,274	0/0:22,0:22:66.21:0,66,863	0/0:33,0:33:96.18:0,96,1201	0/0:38,0:38:99:0,102,1330	0/0:25,0:25:75.24:0,75,980	0/0:33,0:33:87.28:0,87,1144	0/0:13,0:13:39.13:0,39,511	1/1:3,35:38:99:1064,99,0	1/1:1,29:30:81.20:870,81,0	1/1:0,23:23:69.17:742,69,0	0/0:29,0:29:81.25:0,81,1049	0/0:29,0:29:87.28:0,87,1144	0/0:37,0:37:99:0,102,1339	0/0:22,0:22:60.15:0,60,770	0/0:20,0:20:54.18:0,54,709	0/0:21,0:21:57.19:0,57,750	0/0:35,0:35:99:0,99,1254	1/1:0,26:26:75.19:806,75,0	1/1:2,20:22:57.14:611,57,0	1/1:4,28:32:78.19:838,78,0	1/1:1,16:17:48.12:516,48,0	0/0:28,0:28:78.19:0,78,992	0/0:22,0:22:63.20:0,63,827	0/0:5,0:5:15.05:0,15,197
chr10	15081412	.	GGTGTGTGTGT	G	8324.93	PASS	AB=0.625;AC=33;AF=0.589;AN=56;BaseQRankSum=6.398;DP=575;FS=7.574;HRun=0;HaplotypeScore=248.0480;InbreedingCoeff=0.7757;MQ=60.05;MQ0=8;MQRankSum=-7.404;QD=27.38;ReadPosRankSum=5.986;VQSLOD=2.3656;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:28:16.18:223,16,0	1/1:4,6:10:18.06:493,18,0	0/0:31,0:15:6.02:0,6,276	0/0:37,0:18:21.07:0,21,590	0/0:24,0:24:16.76:0,17,826	0/0:20,0:20:15.05:0,15,606	0/0:36,0:36:24.35:0,24,869	1/1:17,1:18:3:91,3,0	1/1:7,15:22:42.14:1274,42,0	1/1:9,13:21:36.12:1092,36,0	1/1:6,9:15:30.07:840,30,0	1/1:9,1:26:45.09:508,45,0	1/1:8,1:16:6.56:258,7,0	1/1:9,0:19:6.07:218,6,0	0/0:23,0:34:20.54:0,21,849	0/0:24,0:24:27.09:0,27,1137	1/1:13,12:25:24.06:728,24,0	0/0:22,0:22:28.65:0,29,1104	0/0:10,0:13:18.06:0,18,762	0/0:13,0:13:12.04:0,12,537	0/0:14,0:14:3.01:0,3,136	0/1:6,0:15:15.13:157,0,15	1/1:3,0:7:8.95:89,9,0	1/1:14,0:17:6.01:59,6,0	1/1:5,1:12:21.05:269,21,0	1/1:15,12:27:38.16:1182,38,0	1/1:7,7:14:27.07:752,27,0	1/1:9,2:11:3.01:91,3,0
chr10	15081507	.	G	GA	2317.60	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-7.234;DP=585;FS=1.687;HRun=4;HaplotypeScore=81.2992;InbreedingCoeff=0.9888;MQ=76.43;MQ0=1;MQRankSum=-0.318;QD=31.32;ReadPosRankSum=0.928;VQSLOD=4.0140;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:33:87.23:0,87,975	0/0:12,0:12:27.07:0,27,306	0/0:21,0:21:57.13:0,57,628	0/0:9,0:8:24.03:0,24,246	1/1:3,24:27:72.20:964,72,0	1/1:2,23:25:63.21:861,63,0	1/1:2,20:22:48.12:635,48,0	0/0:42,0:42:99:0,108,1202	0/0:22,0:22:54.12:0,54,592	0/0:35,0:35:90.22:0,90,1008	0/0:17,0:17:39.11:0,39,442	0/0:28,0:28:60.17:0,60,681	0/0:20,0:20:45.13:0,45,510	0/0:16,0:16:42.09:0,42,461	0/0:20,0:20:54.12:0,54,593	0/0:18,0:18:48.12:0,48,535	0/0:26,0:26:75.21:0,75,850	0/0:11,0:11:21.06:0,21,238	0/0:19,0:19:39.08:0,39,420	0/0:23,0:23:69.20:0,69,783	0/0:9,0:9:18.05:0,18,204	0/0:16,0:16:36.07:0,36,385	0/0:21,0:21:51.14:0,51,578	0/0:16,0:16:39.11:0,39,442	0/0:20,0:20:54.11:0,54,590	0/0:35,0:35:93.25:0,93,1038	0/0:15,0:15:42.12:0,42,476	0/0:6,0:6:15.04:0,15,170
chr10	15081618	.	A	AT	4390.39	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-11.115;DP=569;FS=2.750;HRun=7;HaplotypeScore=58.7544;InbreedingCoeff=0.9969;MQ=80.86;MQ0=0;MQRankSum=1.045;QD=31.14;ReadPosRankSum=1.967;VQSLOD=5.0697;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,99,956	0/0:8,0:8:21.03:0,21,202	0/0:21,0:21:22.76:0,23,318	0/0:14,0:14:27.03:0,27,254	1/1:2,19:21:54.17:652,54,0	1/1:0,18:18:54.17:652,54,0	1/1:2,19:21:51.16:616,51,0	0/0:35,0:35:84.12:0,84,806	0/0:18,0:18:51.08:0,51,492	0/0:18,0:18:51.08:0,51,489	0/0:9,0:9:21.03:0,21,203	0/0:29,0:29:78.12:0,78,752	0/0:20,0:20:48.06:0,48,458	0/0:15,0:15:39.06:0,39,377	1/1:1,26:27:72.22:870,72,0	1/1:2,23:25:60.18:721,60,0	0/0:24,0:24:63.08:0,63,602	1/1:2,27:29:74.72:879,75,0	0/0:21,0:21:60.09:0,60,579	0/0:16,0:16:45.07:0,45,434	0/0:13,0:13:33.03:0,33,313	0/0:9,0:9:24.04:0,24,232	0/0:15,0:15:42.07:0,42,406	0/0:29,0:29:78.10:0,78,746	0/0:22,0:22:57.02:0,57,530	0/0:27,0:27:74.14:0,74,702	0/0:20,0:20:57.09:0,57,550	0/0:10,0:10:26.99:0,27,251
chr10	15081705	.	C	CAGAG	8308.28	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=9.771;DP=572;FS=12.560;HRun=0;HaplotypeScore=101.1613;InbreedingCoeff=0.9701;MQ=63.97;MQ0=2;MQRankSum=-7.077;QD=55.39;ReadPosRankSum=-2.649;VQSLOD=5.0835;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:93.30:0,93,1676	1/1:2,5:7:9.03:239,9,0	0/0:15,0:12:20.02:0,20,382	0/0:12,0:12:33.11:0,33,592	0/0:11,0:11:21.07:0,21,390	0/0:24,0:24:63.19:0,63,1142	0/0:20,0:20:57.20:0,57,1064	1/1:9,30:39:99:2304,105,0	1/1:1,17:18:45.15:1200,45,0	1/1:1,16:17:45.62:1076,46,0	1/1:1,6:7:9.50:240,10,0	0/0:47,0:47:99:0,138,2535	0/0:25,0:25:72.25:0,72,1331	0/0:32,0:32:96.33:0,96,1751	0/0:38,0:38:99:0,111,2072	0/0:21,0:21:60.21:0,60,1113	1/1:4,18:23:48.16:1279,48,0	0/0:28,0:28:81.26:0,81,1478	0/0:17,0:17:45.15:0,45,806	0/0:8,0:8:24.08:0,24,446	0/0:28,0:28:78.27:0,78,1455	0/0:12,0:12:30.10:0,30,560	0/0:9,0:9:18.06:0,18,327	0/0:28,0:28:78.22:0,78,1411	0/0:15,0:15:42.14:0,42,783	1/1:2,11:13:36.11:772,36,0	1/1:4,16:22:36.12:958,36,0	1/1:0,4:4:9.03:240,9,0
chr10	15085765	.	T	TC	3149.27	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=-7.983;DP=505;FS=1.411;HRun=7;HaplotypeScore=52.0408;InbreedingCoeff=0.9045;MQ=71.00;MQ0=0;MQRankSum=-1.228;QD=23.33;ReadPosRankSum=0.071;VQSLOD=3.4863;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,105,1014	1/1:1,4:5:12.04:145,12,0	0/0:9,0:9:10.44:0,10,87	0/1:12,0:12:2.31:2,0,72	0/0:18,0:18:39.06:0,39,377	0/0:16,0:16:45.07:0,45,435	0/0:33,0:33:90.07:0,90,843	1/1:6,8:14:24.05:276,24,0	1/1:0,12:12:36.11:435,36,0	1/1:3,10:13:30.09:362,30,0	1/1:2,6:8:15.05:181,15,0	0/0:31,0:31:90.14:0,90,869	0/0:11,0:11:30.05:0,30,289	0/0:32,0:32:84.13:0,84,811	0/0:6,0:6:15.02:0,15,145	0/0:17,0:17:45.07:0,45,435	1/1:4,34:38:96.29:1160,96,0	0/0:19,0:19:54.09:0,54,521	0/0:18,0:19:47.10:0,47,437	0/0:12,0:12:36.06:0,36,347	0/0:44,0:43:99:0,123,1182	0/0:13,0:13:36.06:0,36,347	0/0:10,0:10:30.03:0,30,283	0/0:30,0:30:81.12:0,81,782	0/0:11,0:11:30.05:0,30,290	1/1:4,11:15:27.08:326,27,0	1/1:2,14:16:36:433,36,0	1/1:0,2:2:3.01:36,3,0
chr10	15086694	.	GAGAGAGAGAGAGAA	G	1548.15	PASS	AB=1.000;AC=22;AF=0.393;AN=56;BaseQRankSum=-1.557;DP=564;FS=13.824;HRun=0;HaplotypeScore=200.2573;InbreedingCoeff=-0.4133;MQ=54.94;MQ0=18;MQRankSum=1.989;QD=3.69;ReadPosRankSum=-4.927;VQSLOD=0.3640;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:35,0:35:73.24:73,0,425	0/1:7,0:7:30.94:31,0,80	0/0:13,0:6:7.84:0,8,75	0/1:28,0:8:7.14:12,0,7	0/1:28,0:28:99:100,0,206	0/1:23,0:22:99:245,0,127	0/1:25,0:25:87.20:145,0,87	0/0:13,0:13:18.14:0,18,103	0/1:10,0:9:49.81:169,0,50	0/1:15,0:15:13.38:13,0,139	0/1:11,0:11:7.99:8,0,41	0/0:33,0:33:21.67:0,22,140	0/0:20,0:20:8.96:0,9,142	1/1:5,22:27:6.02:230,6,0	0/1:24,0:24:80.41:80,0,717	0/1:33,0:33:93.62:94,0,1579	0/1:18,0:18:63.39:76,0,63	0/1:13,0:13:59.09:59,0,605	0/0:16,0:16:28.10:0,28,789	0/0:15,0:15:23.49:0,23,209	0/0:18,0:17:30.31:0,30,341	1/1:23,0:23:0.89:2,1,0	0/0:17,0:17:3.41:0,3,19	0/1:37,0:35:99:103,0,693	0/1:22,0:19:89.10:89,0,130	0/1:19,0:19:99:119,0,159	0/1:16,0:13:42.79:43,0,61	0/1:5,0:5:14.51:15,0,38
chr10	15086700	.	GAGAGAGAA	G	3816.10	PASS	AB=0.996;AC=35;AF=0.625;AN=56;BaseQRankSum=-2.669;DP=552;FS=5.391;HRun=0;HaplotypeScore=154.5374;InbreedingCoeff=-0.0433;MQ=60.82;MQ0=9;MQRankSum=0.984;QD=7.79;ReadPosRankSum=1.180;VQSLOD=2.1931;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:33,0:33:2.73:411,3,0	0/1:7,0:7:36.93:37,0,38	0/0:13,0:8:12.35:0,12,108	0/1:29,0:15:9.95:10,0,70	0/1:27,0:27:50.74:170,0,51	1/1:23,0:22:0.21:363,0,0	1/1:22,0:22:38.25:298,38,0	1/1:7,0:7:1.94:42,2,0	0/1:11,0:10:0.92:179,0,1	0/1:17,0:17:41.64:146,0,42	0/1:14,0:14:7.99:8,0,41	1/1:7,26:33:10.26:202,10,0	0/1:19,1:20:6.14:17,0,6	1/1:26,1:27:5.87:127,6,0	0/1:24,0:24:99:150,0,272	0/1:33,0:33:99:155,0,421	1/1:20,0:20:26.28:209,26,0	0/1:13,0:13:70.95:71,0,188	0/0:14,0:14:25.85:0,26,408	0/0:17,0:17:30.48:0,30,238	0/0:18,0:17:27.30:0,27,231	1/1:3,18:21:0.47:1,0,0	1/1:15,0:15:0.47:1,0,0	1/1:36,0:35:66.65:607,67,0	1/1:19,1:18:21.61:318,22,0	0/1:18,0:18:42.58:196,0,43	0/1:16,0:14:11.77:82,0,12	0/1:4,0:4:17.50:17,0,18
chr10	15086704	.	GAGAA	G	4763.16	PASS	AB=0.856;AC=40;AF=0.714;AN=56;BaseQRankSum=-7.182;DP=562;FS=0.000;HRun=0;HaplotypeScore=133.6244;InbreedingCoeff=0.5226;MQ=68.09;MQ0=9;MQRankSum=0.520;QD=11.00;ReadPosRankSum=2.151;VQSLOD=4.3551;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:32,0:32:52.20:437,52,0	1/1:7,0:7:8.99:74,9,0	0/0:20,0:12:16.12:0,16,160	0/0:38,0:23:2.91:0,3,152	1/1:25,0:25:35.37:284,35,0	1/1:23,0:22:53.55:457,54,0	1/1:23,0:23:48.82:399,49,0	1/1:6,0:6:15.88:135,16,0	1/1:11,0:10:23.97:200,24,0	1/1:20,0:20:45.59:344,46,0	1/1:14,0:14:2.92:17,3,0	1/1:31,0:31:3.70:69,4,0	0/1:2,18:20:2.49:51,0,2	1/1:27,0:27:6.02:71,6,0	0/1:23,1:24:46.83:243,0,47	1/1:30,1:31:2.76:488,3,0	1/1:20,0:20:32.43:258,32,0	0/1:13,0:13:65.19:122,0,65	0/0:18,0:18:11.04:0,11,392	0/0:17,0:17:31.07:0,31,240	0/0:17,0:16:30.15:0,30,228	0/0:19,0:19:0:0,0,0	0/1:14,1:15:0:0,0,0	1/1:35,0:34:29.09:408,29,0	1/1:20,0:18:34.42:288,34,0	1/1:18,0:18:31.32:264,31,0	1/1:14,0:12:18.42:130,18,0	1/1:4,0:4:2.99:24,3,0
chr10	15086706	.	GAA	G	5525.59	PASS	AB=0.839;AC=43;AF=0.768;AN=56;BaseQRankSum=-5.849;DP=558;FS=1.171;HRun=3;HaplotypeScore=117.6411;InbreedingCoeff=0.6067;MQ=68.87;MQ0=9;MQRankSum=0.153;QD=12.42;ReadPosRankSum=2.651;VQSLOD=1.7909;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:34,0:34:70.42:542,70,0	1/1:6,0:6:8.99:74,9,0	0/0:21,0:13:19.74:0,20,194	0/0:40,0:25:8.72:0,9,191	1/1:26,0:26:38.13:308,38,0	1/1:23,0:22:51.82:440,52,0	1/1:23,0:23:52.74:416,53,0	1/1:8,0:8:22.25:192,22,0	1/1:9,0:9:23.81:186,24,0	1/1:20,0:20:47.70:370,48,0	1/1:3,0:15:2.91:17,3,0	1/1:28,0:29:5.21:45,5,0	1/1:20,0:20:5.31:38,5,0	1/1:26,0:26:5.68:43,6,0	1/1:23,0:23:31.15:364,31,0	1/1:28,3:31:34.44:616,34,0	1/1:18,0:18:35.41:283,35,0	0/1:13,0:13:24.87:168,0,25	0/1:18,0:18:7.28:7,0,289	0/0:17,0:17:9.80:0,10,216	0/0:16,0:15:29.68:0,30,228	0/0:19,0:19:0.47:0,0,1	0/1:1,15:16:0.05:0,0,0	1/1:36,0:35:77.15:665,77,0	1/1:19,0:17:34.95:284,35,0	1/1:14,0:14:31.20:264,31,0	1/1:13,0:11:19.35:132,19,0	1/1:4,0:4:8.98:72,9,0
chr10	15087104	.	TA	T	4443.59	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=12.163;DP=419;FS=2.256;HRun=7;HaplotypeScore=42.6504;InbreedingCoeff=0.9621;MQ=67.16;MQ0=0;MQRankSum=-1.193;QD=26.14;ReadPosRankSum=0.099;VQSLOD=4.9657;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:63.19:0,63,777	1/1:1,8:9:21.05:214,21,0	0/0:7,0:7:4.44:0,4,96	0/0:11,0:9:14.66:0,15,187	0/0:17,0:17:42.09:0,42,511	0/0:22,0:22:63.19:0,63,780	0/0:12,0:12:24.08:0,24,301	1/1:2,29:31:87.15:867,87,0	1/1:3,4:7:18.02:172,18,0	1/1:3,29:32:87.20:888,87,0	1/1:4,10:14:21.04:214,21,0	0/0:9,0:9:24.06:0,24,281	0/0:6,0:6:18.06:0,18,226	0/0:6,0:5:15.03:0,15,174	0/0:15,0:15:42.08:0,42,509	0/0:16,0:16:45.14:0,45,566	1/1:3,29:32:87.15:876,87,0	0/0:25,0:25:75.22:0,75,929	0/0:16,0:16:45.12:0,45,534	0/0:10,0:10:27.09:0,27,340	0/0:10,0:10:24.04:0,24,273	0/0:5,0:5:12.04:0,12,151	0/0:10,0:10:30.10:0,30,377	0/0:10,0:10:24.05:0,24,276	0/0:19,0:19:51.12:0,51,610	1/1:0,20:20:53.98:509,54,0	1/1:0,19:19:51.12:520,51,0	1/1:0,6:6:18.04:184,18,0
chr10	15087689	.	T	TAAAGATTAAATAAAAA	16791.83	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-4.452;DP=653;FS=0.436;HRun=0;HaplotypeScore=211.8982;InbreedingCoeff=0.9091;MQ=73.79;MQ0=0;MQRankSum=-12.189;QD=52.97;ReadPosRankSum=-2.911;VQSLOD=3.6701;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,13:34:24.08:1570,24,0	0/0:8,0:8:21.01:0,21,438	0/0:19,0:19:18.04:0,18,459	0/0:23,0:23:32.31:0,32,637	1/1:6,1:44:56.95:2418,57,0	1/1:4,1:25:45.15:3119,45,0	1/1:6,0:17:6.02:390,6,0	0/0:32,0:32:78.22:0,78,2726	0/0:24,0:24:57.16:0,57,2138	0/0:27,0:27:65.97:0,66,2493	0/0:9,0:9:21.07:0,21,788	1/1:9,10:21:9.03:691,9,0	1/1:6,14:25:27.56:2028,28,0	1/1:6,7:18:6.02:271,6,0	1/1:4,1:20:6.02:418,6,0	1/1:10,0:31:23.74:1638,24,0	0/0:28,0:28:66.18:0,66,2562	1/1:17,0:17:29.95:820,30,0	0/0:29,0:29:49.23:0,49,2424	0/0:29,0:29:57.14:0,57,1917	0/0:21,0:21:51.15:0,51,2074	1/1:3,4:8:5.98:250,6,0	1/1:4,5:23:9.03:691,9,0	1/1:4,4:10:6.02:414,6,0	1/1:3,11:23:27.09:2074,27,0	0/0:32,0:32:81.21:0,81,3007	0/0:44,0:44:99:0,114,3944	0/0:11,0:11:27.09:0,27,1201
chr10	15088900	.	T	TA	2278.18	PASS	AB=0.877;AC=15;AF=0.268;AN=56;BaseQRankSum=-7.047;DP=653;FS=8.282;HRun=12;HaplotypeScore=74.7091;InbreedingCoeff=0.6777;MQ=76.94;MQ0=0;MQRankSum=0.275;QD=12.18;ReadPosRankSum=1.555;VQSLOD=3.2497;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:45,2:48:58.99:0,59,578	0/0:9,0:9:26.85:0,27,197	0/0:22,0:19:1.27:0,1,98	0/0:17,0:15:12.21:0,12,79	1/1:5,23:30:30.99:581,31,0	1/1:3,20:24:35.02:489,35,0	1/1:5,13:19:4.18:298,4,0	0/0:28,0:30:58.40:0,58,412	0/0:20,1:21:20.65:0,21,317	0/0:32,0:34:69.55:0,70,491	0/1:11,3:14:2.43:2,0,147	0/0:27,0:28:52.55:0,53,371	0/1:13,1:14:2.39:2,0,146	0/0:20,0:20:47.62:0,48,345	1/1:5,13:18:33.05:321,33,0	1/1:5,14:20:5.60:351,6,0	0/0:21,0:21:50.66:0,51,372	1/1:6,20:27:12.65:395,13,0	0/0:12,0:14:33.88:0,34,229	0/0:19,0:19:38.66:0,39,284	0/1:18,3:21:13.65:14,0,240	0/0:22,0:23:40.73:0,41,286	0/0:18,2:20:9.53:0,10,232	0/0:21,1:22:11.27:0,11,360	0/0:29,0:30:40.38:0,40,419	0/0:31,0:31:59.57:0,60,437	0/0:34,0:34:59.18:0,59,561	0/0:21,0:22:49.56:0,50,347
chr10	15104168	.	GCACA	G	3628.13	PASS	AB=0.629;AC=11;AF=0.196;AN=56;BaseQRankSum=0.605;DP=703;FS=9.245;HRun=0;HaplotypeScore=136.9805;InbreedingCoeff=0.8019;MQ=64.97;MQ0=14;MQRankSum=0.903;QD=25.37;ReadPosRankSum=2.006;VQSLOD=3.1837;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:40:42.14:0,42,768	0/0:8,0:9:20.80:0,21,374	0/0:46,0:21:18.06:0,18,393	0/0:40,0:22:15.05:0,15,314	0/0:19,0:22:5.07:0,5,70	0/0:20,0:28:3.33:0,3,53	0/0:23,0:23:11.46:0,11,217	0/0:22,0:22:27.09:0,27,603	0/0:24,0:24:60.21:0,60,1448	0/0:27,0:32:71.23:0,71,1347	0/0:10,0:12:23.55:0,24,451	0/0:10,0:30:42.62:0,43,736	0/0:10,0:22:39.13:0,39,713	0/0:6,0:22:32.87:0,33,531	1/1:9,22:32:50.60:961,51,0	1/1:6,18:27:63.19:939,63,0	0/0:30,1:40:29.87:0,30,1329	0/1:9,13:22:5.78:453,0,6	1/1:6,9:17:30.04:393,30,0	1/1:1,11:13:27.08:386,27,0	1/1:12,18:32:13.90:497,14,0	0/0:4,0:19:21.86:0,22,371	0/0:4,0:4:2.58:0,3,63	0/0:16,0:39:57.17:0,57,937	0/0:12,0:26:30.10:0,30,525	0/0:17,0:18:43.12:0,43,953	0/0:29,1:33:22.55:0,23,1328	0/0:6,0:7:20.81:0,21,448
chr10	15104299	.	GAAAGAAAGAAAGAAAA	G	4773.32	PASS	AB=0.973;AC=22;AF=0.393;AN=56;BaseQRankSum=7.528;DP=458;FS=0.000;HRun=0;HaplotypeScore=228.6810;InbreedingCoeff=-0.4218;MQ=56.07;MQ0=5;MQRankSum=0.365;QD=13.33;ReadPosRankSum=3.330;VQSLOD=3.2496;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:16,0:16:47.66:48,0,270	0/0:2,0:2:0.77:0,1,38	0/0:7,0:6:15.93:0,16,181	0/0:6,0:5:8.08:0,8,87	0/1:13,0:13:99:203,0,179	0/1:15,0:14:99:146,0,209	0/0:6,0:6:17.82:0,18,124	1/1:25,0:20:6.26:395,6,0	0/1:3,11:14:99:516,0,135	0/1:27,0:26:99:376,0,201	0/1:21,1:22:99:436,0,108	0/1:15,0:15:99:324,0,215	0/1:12,0:12:99:259,0,141	0/1:11,0:11:99:247,0,143	0/0:17,0:17:51.14:0,51,1804	0/0:24,0:24:70.67:0,71,2601	0/1:29,0:29:99:334,0,329	0/0:32,0:31:96.18:0,96,3149	0/1:14,0:14:99:140,0,250	0/1:20,0:20:99:214,0,321	0/1:9,0:9:40.64:41,0,160	0/1:13,0:13:52.17:52,0,233	0/1:16,0:16:99:159,0,118	0/0:6,0:6:12.18:0,12,64	0/1:19,0:19:99:317,0,264	0/1:29,0:29:99:413,0,392	0/1:23,0:23:71.63:72,0,147	1/1:16,0:16:6.02:83,6,0
chr10	15104303	.	GAAAGAAAGAAAA	G	6137.50	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=7.625;DP=480;FS=7.522;HRun=0;HaplotypeScore=200.5414;InbreedingCoeff=0.0294;MQ=59.70;MQ0=4;MQRankSum=1.350;QD=16.45;ReadPosRankSum=3.789;VQSLOD=3.0877;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:18,0:18:14.16:14,0,316	1/1:2,0:2:5.95:92,6,0	0/0:9,0:8:14.69:0,15,204	0/0:5,0:6:11.06:0,11,109	0/1:14,0:14:99:116,0,203	0/1:15,0:14:90.18:90,0,209	0/0:7,0:7:20.82:0,21,152	1/1:28,0:23:49.94:480,50,0	0/1:12,0:12:72.43:332,0,72	1/1:3,24:26:56.56:1057,57,0	1/1:2,20:22:61.82:718,62,0	0/1:15,0:15:99:213,0,215	0/1:12,0:12:99:175,0,141	0/1:12,0:12:99:160,0,167	0/0:18,0:18:54.13:0,54,1193	0/0:25,0:25:70.34:0,70,2030	1/1:22,5:27:18.42:645,18,0	0/0:34,0:33:99:0,99,2102	0/1:17,0:17:75.17:75,0,322	0/1:22,0:22:99:124,0,369	0/1:9,0:9:12.71:13,0,160	0/1:13,0:13:24.28:24,0,233	0/1:17,0:17:99:100,0,142	0/0:8,0:8:17.46:0,17,116	0/1:21,0:21:99:199,0,313	1/1:4,27:31:77.36:1057,77,0	1/1:3,22:25:8.33:231,8,0	1/1:0,14:14:6.02:223,6,0
chr10	15106516	.	CG	C	420.73	PASS	AB=0.795;AC=17;AF=0.327;AN=52;BaseQRankSum=1.828;DP=205;FS=7.891;HRun=11;HaplotypeScore=37.9346;InbreedingCoeff=0.3328;MQ=86.78;MQ0=2;MQRankSum=0.593;QD=4.73;ReadPosRankSum=3.968;VQSLOD=0.0573;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,4:9:5.98:49,6,0	0/0:4,0:4:8.98:0,9,78	0/0:19,0:13:14.06:0,14,73	0/0:13,0:11:7.04:0,7,26	./.	0/0:4,0:4:9.02:0,9,95	0/0:9,1:10:2.39:0,2,218	0/0:6,0:6:12.03:0,12,128	0/1:8,1:10:12.85:13,0,84	0/0:2,1:3:3.01:0,3,32	0/0:3,0:3:9:0,9,82	0/1:11,4:15:33.23:33,0,45	0/1:4,6:10:1.15:136,0,1	1/1:5,3:7:14.81:110,15,0	0/0:8,0:9:5.80:0,6,34	0/0:8,0:8:11.70:0,12,77	0/1:8,2:10:36.79:37,0,52	./.	0/0:5,0:5:11.60:0,12,64	0/0:4,0:4:8.87:0,9,58	0/0:19,0:19:46.91:0,47,280	1/1:2,2:4:5.99:49,6,0	1/1:4,0:4:2.85:22,3,0	1/1:5,1:7:6.53:52,7,0	1/1:1,2:3:5.98:49,6,0	0/0:4,0:4:6.02:0,6,64	0/1:7,2:9:30.35:30,0,90	0/0:1,0:1:3:0,3,25
chr10	15108036	.	T	TG	1729.42	PASS	AB=0.579;AC=21;AF=0.375;AN=56;BaseQRankSum=-1.948;DP=390;FS=5.515;HRun=8;HaplotypeScore=51.2683;InbreedingCoeff=0.8072;MQ=81.61;MQ0=0;MQRankSum=-0.543;QD=10.68;ReadPosRankSum=2.110;VQSLOD=1.7718;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,18:24:40.36:454,40,0	0/0:9,0:9:5.64:0,6,53	0/0:13,0:12:26.89:0,27,218	0/0:18,0:18:29.94:0,30,253	0/0:11,0:11:21:0,21,192	0/0:15,0:15:29.99:0,30,270	0/0:22,0:22:47.95:0,48,430	0/0:8,0:9:12.47:0,12,113	0/0:12,0:12:24:0,24,219	0/0:15,0:15:35.99:0,36,320	0/0:7,0:7:12:0,12,107	1/1:7,14:21:12.04:139,12,0	1/1:5,6:11:14.63:149,15,0	1/1:3,9:12:9.03:104,9,0	0/0:14,0:14:24:0,24,219	0/0:17,0:17:35.99:0,36,325	0/0:28,0:28:46.13:0,46,549	0/0:8,0:8:14.98:0,15,133	1/1:6,5:11:17.97:169,18,0	1/1:2,3:6:8.86:80,9,0	1/1:8,24:32:20.55:472,21,0	1/1:1,4:5:6.02:69,6,0	1/1:1,1:2:3.01:34,3,0	0/1:6,16:22:15.43:92,0,15	1/1:4,12:16:15.04:173,15,0	0/0:13,0:13:11.98:0,12,110	0/0:14,0:14:32:0,32,268	0/0:3,0:3:6:0,6,55
chr10	15108375	.	C	CAAAA	5995.04	PASS	AB=0.937;AC=28;AF=0.500;AN=56;BaseQRankSum=-0.592;DP=531;FS=1.932;HRun=8;HaplotypeScore=113.9037;InbreedingCoeff=-0.8767;MQ=53.16;MQ0=15;MQRankSum=-7.672;QD=12.23;ReadPosRankSum=4.734;VQSLOD=0.6445;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:26:99:192,0,168	0/1:12,2:13:86.03:250,0,86	0/0:41,0:10:0.93:0,1,104	0/1:20,0:6:12.39:12,0,21	0/1:16,6:22:99:377,0,103	0/1:13,6:18:30.68:523,0,31	0/1:20,7:27:99:525,0,139	0/1:33,0:32:99:180,0,446	0/1:12,0:12:65.74:211,0,66	0/1:23,2:24:99:341,0,237	0/1:15,7:22:99:575,0,123	0/1:16,0:16:42.21:42,0,47	0/1:13,0:12:42.06:42,0,69	0/1:20,0:17:16.19:99,0,16	0/1:14,1:15:58.75:189,0,59	0/1:13,0:13:46.82:47,0,106	0/1:24,3:26:77.98:575,0,78	0/1:12,0:13:52.24:171,0,52	1/1:23,0:21:7.49:411,7,0	0/1:16,0:16:12.26:77,0,12	0/1:9,0:8:14.43:61,0,14	0/1:11,0:11:36.13:36,0,161	0/1:14,1:15:28.17:162,0,28	0/1:12,1:12:99:201,0,117	0/1:15,1:16:99:145,0,118	0/1:21,0:21:99:213,0,295	0/1:17,2:18:99:292,0,183	0/1:6,0:5:7.40:46,0,7
chr10	15108380	.	CA	C	1306.73	PASS	AB=0.787;AC=12;AF=0.214;AN=56;BaseQRankSum=-3.587;DP=521;FS=0.000;HRun=13;HaplotypeScore=109.7696;InbreedingCoeff=0.1624;MQ=56.43;MQ0=11;MQRankSum=0.944;QD=6.60;ReadPosRankSum=1.579;VQSLOD=2.6093;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:21:26.84:0,27,235	0/1:7,5:11:13.43:98,0,13	0/0:39,0:11:14.71:0,15,142	0/0:18,1:7:8.61:0,9,57	0/0:22,0:22:25.05:0,25,128	0/0:20,0:19:32.47:0,32,140	0/0:28,0:27:51.22:0,51,221	0/1:21,14:35:2.41:278,0,2	0/1:11,2:13:41.58:64,0,42	1/1:12,13:24:23.77:292,24,0	1/1:15,9:24:15.32:246,15,0	0/0:13,0:13:12.85:0,13,107	0/0:13,0:12:12.01:0,12,113	0/0:17,0:17:13.73:0,14,117	0/0:12,0:16:12.05:0,12,122	0/0:7,0:12:7.54:0,8,61	0/1:26,2:27:67.73:135,0,68	0/0:11,0:13:15.42:0,15,74	0/0:23,0:20:36.27:0,36,265	0/0:8,1:9:12.02:0,12,116	0/0:10,0:10:11.86:0,12,101	0/1:10,1:12:4.27:4,0,90	0/0:13,0:15:14.68:0,15,108	0/0:10,0:10:13.64:0,14,166	0/0:16,1:18:1.96:0,2,166	0/1:10,10:21:51.56:190,0,52	0/1:17,4:20:54.77:122,0,55	0/1:3,2:5:19.40:36,0,19
chr10	15108383	.	A	AC	1826.42	PASS	AB=1.000;AC=20;AF=0.357;AN=56;BaseQRankSum=3.268;DP=528;FS=3.111;HRun=0;HaplotypeScore=111.8024;InbreedingCoeff=-0.0878;MQ=58.11;MQ0=11;MQRankSum=-9.091;QD=5.47;ReadPosRankSum=2.145;VQSLOD=3.6807;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:22:17.49:0,17,234	0/1:11,0:10:13.23:13,0,106	0/0:38,0:11:15.25:0,15,200	0/0:20,0:8:5.77:0,6,49	1/1:6,13:24:38.68:468,39,0	1/1:5,9:19:41.26:449,41,0	1/1:5,16:27:59.46:694,59,0	0/1:36,0:35:7.97:8,0,513	0/1:13,0:13:4.58:5,0,204	0/1:29,0:28:50.43:50,0,370	0/1:24,0:24:34.89:35,0,207	0/0:13,0:13:14.42:0,14,136	0/0:12,0:11:11.49:0,11,108	0/0:19,0:19:19.79:0,20,149	0/1:16,0:16:31.64:32,0,32	0/0:12,0:11:2.22:0,2,98	0/1:27,0:26:39.73:40,0,258	0/1:14,0:14:24:37,0,24	0/1:21,0:18:47.02:47,0,265	0/0:9,0:9:12.04:0,12,158	0/1:11,0:10:0.22:0,0,133	0/0:12,0:12:7.52:0,8,90	0/0:15,0:15:1.53:0,2,34	0/1:11,0:11:4.35:4,0,189	0/0:20,0:20:17.95:0,18,241	0/1:23,0:23:59.13:59,0,285	0/1:19,0:18:43.51:44,0,268	0/1:7,0:6:6.19:6,0,66
chr10	15115315	.	T	TCAGGTAAGGAC	70174.02	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-9.810;DP=839;FS=1.185;HRun=0;HaplotypeScore=160.8327;InbreedingCoeff=0.9844;MQ=73.30;MQ0=0;MQRankSum=-11.282;QD=90.08;ReadPosRankSum=6.414;VQSLOD=4.7408;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,19:33:60.21:3182,60,0	1/1:1,5:11:15.05:869,15,0	0/0:34,0:34:75.22:0,75,2007	0/0:26,0:26:62.06:0,62,1605	1/1:1,11:25:30.10:1250,30,0	1/1:1,15:23:45.15:2463,45,0	1/1:2,17:41:51.18:2726,51,0	1/1:4,8:37:96.29:4486,96,0	1/1:2,15:31:48.16:2707,48,0	1/1:1,17:29:78.25:3574,78,0	1/1:0,13:16:39.13:1662,39,0	1/1:0,37:56:99:6239,111,0	1/1:1,21:37:65.86:3744,66,0	1/1:1,18:33:54.19:2732,54,0	1/1:0,20:34:60.21:3079,60,0	1/1:1,20:41:60.21:3478,60,0	1/1:0,9:19:21.07:1011,21,0	1/1:1,7:26:24.08:1366,24,0	1/1:1,10:28:81.26:3540,81,0	1/1:0,16:29:48.16:2172,48,0	1/1:0,13:36:36.07:1019,36,0	1/1:0,15:29:48.16:2641,48,0	1/1:2,13:27:42.14:2096,42,0	1/1:3,21:32:47.90:2554,48,0	1/1:2,15:29:48.16:2374,48,0	1/1:0,27:36:99:5582,102,0	1/1:3,16:28:48.16:2585,48,0	1/1:0,6:13:18.06:1045,18,0
chr10	15117678	.	TA	T	2481.52	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=10.723;DP=706;FS=2.882;HRun=1;HaplotypeScore=90.0828;InbreedingCoeff=0.9894;MQ=86.36;MQ0=0;MQRankSum=-1.170;QD=31.02;ReadPosRankSum=1.349;VQSLOD=3.4826;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:93.26:0,93,1426	0/0:15,0:15:42.10:0,42,613	0/0:17,0:17:45.47:0,45,633	0/0:28,0:28:77.38:0,77,1042	0/0:10,0:10:24.08:0,24,365	0/0:22,0:22:66.22:0,66,1046	0/0:36,0:36:99:0,108,1650	0/0:29,0:29:87.28:0,87,1348	0/0:24,0:24:72.21:0,72,1102	0/0:20,0:20:57.17:0,57,862	0/0:7,0:7:18.05:0,18,253	0/0:44,0:44:99:0,132,2002	0/0:31,0:31:93.28:0,93,1417	0/0:28,0:28:83.62:0,84,1257	0/0:26,0:26:78.20:0,78,1211	0/0:26,0:26:78.24:0,78,1196	0/0:37,0:37:99:0,111,1699	0/0:55,0:55:99:0,165,2556	1/1:0,15:15:45.09:545,45,0	1/1:0,6:6:15.05:209,15,0	1/1:1,58:59:99:1868,135,0	0/0:9,0:9:27.07:0,27,406	0/0:10,0:10:30.07:0,30,428	0/0:42,0:42:99:0,123,1903	0/0:19,0:19:54.13:0,54,751	0/0:22,0:22:63.20:0,63,983	0/0:30,0:30:90.28:0,90,1387	0/0:8,0:8:24.08:0,24,383
chr10	15118199	.	CGACCACTT	C	10611.85	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=16.804;DP=842;FS=1.129;HRun=0;HaplotypeScore=216.2598;InbreedingCoeff=0.9903;MQ=79.46;MQ0=0;MQRankSum=-17.804;QD=41.94;ReadPosRankSum=4.348;VQSLOD=4.5904;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:12,30:42:54.19:1407,54,0	0/0:5,0:5:15.05:0,15,629	0/0:24,0:23:45.06:0,45,1295	0/0:30,0:31:56.95:0,57,1195	0/0:14,0:14:36.11:0,36,1356	0/0:17,0:17:39.12:0,39,1521	0/0:34,0:34:81.25:0,81,2827	0/0:42,0:42:96.26:0,96,2684	0/0:41,0:41:99:0,108,4159	0/0:24,0:24:66.21:0,66,2359	0/0:7,0:7:18.03:0,18,558	1/1:7,30:37:69.24:1819,69,0	1/1:3,32:35:63.22:1660,63,0	1/1:3,41:44:99:2846,108,0	0/0:40,0:40:99:0,102,4172	0/0:49,0:49:99:0,129,5002	0/0:39,0:39:99:0,108,4036	0/0:38,0:38:99:0,102,3508	0/0:23,0:23:63.18:0,63,2024	0/0:14,0:14:36.12:0,36,1490	0/0:73,0:73:99:0,193,7294	1/1:2,23:25:48.16:1265,48,0	1/1:1,20:21:26.67:708,27,0	1/1:11,23:34:12.04:274,12,0	1/1:3,12:15:24.08:633,24,0	0/0:35,0:35:99:0,99,3955	0/0:19,0:19:54.19:0,54,2116	0/0:20,0:20:54.12:0,54,1757
chr10	15121567	.	G	GA	5540.12	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-11.512;DP=538;FS=6.294;HRun=1;HaplotypeScore=48.6761;InbreedingCoeff=0.9909;MQ=55.61;MQ0=5;MQRankSum=4.809;QD=40.74;ReadPosRankSum=2.679;VQSLOD=5.2842;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,26:28:72.23:1059,72,0	0/0:10,0:10:27.09:0,27,350	0/0:10,0:5:12.02:0,12,139	0/0:12,0:5:15.02:0,15,175	0/0:27,0:26:63.17:0,63,799	0/0:15,0:15:42.14:0,42,544	0/0:25,0:25:54.18:0,54,701	0/0:26,0:26:78.24:0,78,996	0/0:9,0:9:21.07:0,21,272	0/0:21,0:21:63.16:0,63,771	0/0:20,0:20:57.19:0,57,739	1/1:1,15:16:45.14:655,45,0	1/1:1,20:21:63.21:926,63,0	1/1:1,11:12:36.10:518,36,0	0/0:33,0:33:99:0,99,1271	0/0:18,0:18:54.18:0,54,700	0/0:32,0:32:96.31:0,96,1246	0/0:36,0:36:99:0,105,1277	0/0:21,0:21:57.12:0,57,690	0/0:17,0:17:51.14:0,51,644	0/0:21,0:19:57.19:0,57,739	1/1:0,10:10:24.08:359,24,0	1/1:0,12:12:30.10:449,30,0	1/1:0,13:13:39.13:584,39,0	1/1:1,23:24:66.22:989,66,0	0/0:18,0:18:54.18:0,54,701	0/0:15,0:15:45.15:0,45,584	0/0:16,0:15:45.15:0,45,584
chr10	15121634	.	TAA	T	3219.44	PASS	AB=0.693;AC=38;AF=0.679;AN=56;BaseQRankSum=-2.301;DP=433;FS=3.162;HRun=16;HaplotypeScore=65.3941;InbreedingCoeff=0.6094;MQ=61.32;MQ0=5;MQRankSum=-2.395;QD=10.09;ReadPosRankSum=1.083;VQSLOD=2.1796;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,12:24:46.96:432,47,0	0/1:2,1:3:16.47:16,0,24	0/0:24,0:9:14.52:0,15,139	0/0:15,0:5:9.17:0,9,88	1/1:6,0:23:28.57:123,29,0	1/1:5,0:19:16.08:130,16,0	1/1:2,0:10:19.26:84,19,0	1/1:14,14:29:29.54:292,30,0	1/1:2,10:13:14.80:167,15,0	1/1:7,7:15:23.61:187,24,0	1/1:1,9:12:5.74:134,6,0	0/1:8,7:17:2.90:153,0,3	0/1:9,6:15:2.29:130,0,2	1/1:2,6:9:20.67:162,21,0	0/0:5,1:11:14.87:0,15,81	0/1:9,1:19:1.85:2,0,90	1/1:6,13:19:35.71:301,36,0	0/0:16,2:29:1.04:0,1,233	0/0:10,0:13:15.65:0,16,93	0/0:8,0:17:27.92:0,28,163	0/0:3,0:5:2.37:0,2,8	1/1:1,3:4:5.90:50,6,0	1/1:3,7:11:17.56:136,18,0	1/1:1,2:3:8.99:75,9,0	1/1:4,10:15:32.31:248,32,0	1/1:7,9:19:6.79:132,7,0	1/1:12,6:20:14.52:177,15,0	1/1:5,14:19:32.80:269,33,0
chr10	15122995	.	C	CA	611.06	PASS	AB=0.908;AC=11;AF=0.196;AN=56;BaseQRankSum=0.297;DP=374;FS=7.490;HRun=12;HaplotypeScore=79.2828;InbreedingCoeff=0.4146;MQ=67.33;MQ0=13;MQRankSum=-1.060;QD=5.51;ReadPosRankSum=-1.528;VQSLOD=1.6268;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:13.02:0,13,59	0/0:4,0:4:5.96:0,6,44	0/0:20,0:6:0.39:0,0,17	0/1:31,0:12:9.08:9,0,20	1/1:12,8:21:37.58:335,38,0	1/1:7,5:12:19.83:170,20,0	1/1:5,3:7:14.98:126,15,0	0/0:28,0:28:53.40:0,53,362	0/0:7,0:7:2.98:0,3,22	0/0:14,0:14:23.77:0,24,168	0/0:11,0:12:32.81:0,33,240	0/0:10,0:10:3.90:0,4,9	0/0:11,0:11:12.23:0,12,73	0/0:9,0:9:10:0,10,67	0/0:4,0:4:8.92:0,9,62	0/0:11,0:11:19.44:0,19,102	0/0:25,0:25:35.79:0,36,261	0/0:29,0:29:53.30:0,53,362	0/1:10,4:14:7.54:95,0,8	0/0:4,1:4:8.46:0,8,42	0/1:4,1:4:12.79:23,0,13	0/1:7,0:7:0:0,0,0	0/0:4,0:4:8.82:0,9,60	0/0:5,0:5:8.87:0,9,64	0/0:8,0:8:6.23:0,6,13	0/1:12,1:12:2.62:3,0,124	0/0:28,1:29:24.76:0,25,328	0/0:13,0:12:11.86:0,12,87
chr10	15123006	.	AATAAAT	A	1308.47	PASS	AB=0.989;AC=13;AF=0.241;AN=54;BaseQRankSum=-5.181;DP=344;FS=1.773;HRun=0;HaplotypeScore=103.4805;InbreedingCoeff=0.2657;MQ=67.65;MQ0=6;MQRankSum=3.781;QD=9.02;ReadPosRankSum=-5.881;VQSLOD=0.1027;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:24.01:0,24,410	0/1:4,0:4:11.89:35,0,12	0/0:11,0:5:7.69:0,8,49	0/1:20,0:8:4.34:4,0,74	1/1:18,2:20:40.92:516,41,0	1/1:9,1:11:18.77:171,19,0	1/1:5,2:7:12.28:106,12,0	0/1:37,0:36:53.44:349,0,53	0/0:4,0:4:2.74:0,3,12	0/1:11,0:12:26.16:99,0,26	0/0:12,0:12:9.43:0,9,128	0/0:8,0:8:8.95:0,9,186	0/0:9,0:9:17.93:0,18,244	0/0:7,0:7:11.85:0,12,124	0/0:3,0:3:9.03:0,9,142	0/0:10,0:10:25.45:0,25,225	0/0:25,0:25:32.93:0,33,140	0/0:26,0:25:56.97:0,57,860	0/1:14,0:14:3.81:4,0,257	0/0:7,0:6:8.98:0,9,180	0/0:4,0:3:5.99:0,6,70	./.	0/1:3,0:3:2.87:3,0,70	0/0:4,0:4:7.49:0,7,44	0/0:9,0:9:15.05:0,15,296	0/1:16,0:15:11.72:177,0,12	0/0:33,0:33:43.29:0,43,209	0/0:13,0:12:10.06:0,10,40
chr10	15123008	.	TA	T	1035.99	PASS	AB=1.000;AC=23;AF=0.426;AN=54;BaseQRankSum=-0.646;DP=338;FS=0.000;HRun=12;HaplotypeScore=79.0431;InbreedingCoeff=0.4957;MQ=66.75;MQ0=4;MQRankSum=1.331;QD=5.05;ReadPosRankSum=4.148;VQSLOD=1.6806;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:24.02:0,24,253	1/1:4,0:4:2.66:6,3,0	0/0:11,0:4:7.90:0,8,45	0/0:17,1:8:9.01:0,9,35	0/1:19,0:19:14.61:15,0,29	1/1:10,0:10:1.80:13,2,0	1/1:8,0:7:5.36:14,5,0	0/1:38,0:37:3.44:3,0,25	1/1:4,0:4:0.89:2,1,0	0/0:12,0:12:8.40:0,8,85	0/0:12,0:12:9.48:0,9,170	0/0:7,0:7:9.02:0,9,96	0/0:9,0:9:15.03:0,15,162	0/0:6,0:6:6.02:0,6,73	1/1:0,4:4:9.03:112,9,0	1/1:7,3:10:26.92:331,27,0	1/1:24,0:24:10.63:27,11,0	1/1:3,22:24:36.94:647,37,0	0/0:17,0:17:15.41:0,15,99	0/0:8,0:7:11.34:0,11,111	0/0:4,0:3:5.80:0,6,42	./.	0/0:3,0:3:8.80:0,9,75	0/0:3,0:3:4.24:0,4,28	0/0:9,0:9:15.04:0,15,162	1/1:16,0:15:1.17:12,1,0	0/1:33,0:33:18.40:18,0,60	1/1:9,0:10:0.28:3,0,0
chr10	15123009	.	AAAT	A	5979.58	PASS	AB=1.000;AC=27;AF=0.500;AN=54;BaseQRankSum=-8.841;DP=336;FS=4.286;HRun=0;HaplotypeScore=69.5071;InbreedingCoeff=0.7402;MQ=66.90;MQ0=4;MQRankSum=1.699;QD=30.35;ReadPosRankSum=-0.602;VQSLOD=4.6575;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:17.79:0,18,125	1/1:0,4:4:12.04:177,12,0	0/0:11,0:4:2.20:0,2,29	0/0:18,0:8:11.73:0,12,96	1/1:7,12:19:42.14:585,42,0	1/1:6,5:11:24.08:333,24,0	1/1:4,4:7:18.06:263,18,0	1/1:4,34:37:99:1514,102,0	1/1:1,3:4:3.01:48,3,0	1/1:8,4:12:29.88:423,30,0	1/1:4,8:12:21.03:303,21,0	0/0:7,0:7:8.96:0,9,68	0/0:8,0:8:8.86:0,9,65	0/0:4,0:4:2.97:0,3,22	0/0:4,0:4:8.92:0,9,62	0/0:10,0:10:14.85:0,15,102	1/1:0,24:24:36.12:579,36,0	0/0:25,0:24:53.46:0,53,366	0/0:16,0:16:11.22:0,11,298	0/0:8,0:7:20.32:0,20,201	0/0:4,0:3:0.79:0,1,33	./.	0/1:3,0:3:12.38:27,0,12	1/1:3,0:3:3.01:42,3,0	0/0:10,0:10:12.80:0,13,88	1/1:1,15:15:45.15:683,45,0	1/1:3,30:33:50.65:816,51,0	1/1:1,9:10:12.04:186,12,0
chr10	15123012	.	T	TAAATA	3829.81	PASS	AB=0.943;AC=28;AF=0.519;AN=54;BaseQRankSum=-4.039;DP=327;FS=0.523;HRun=0;HaplotypeScore=86.4279;InbreedingCoeff=0.4070;MQ=65.17;MQ0=3;MQRankSum=-1.435;QD=19.74;ReadPosRankSum=-3.034;VQSLOD=2.4009;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,11:15:21.07:663,21,0	0/1:4,0:4:40.08:48,0,40	0/1:10,0:3:2.44:2,0,28	0/0:13,0:6:9.84:0,10,85	1/1:16,0:16:35.05:334,35,0	1/1:6,0:12:16.89:133,17,0	1/1:7,0:7:6.68:69,7,0	1/1:40,0:40:53.52:813,54,0	0/0:3,0:3:3:0,3,26	0/1:7,0:11:45.80:207,0,46	0/1:11,0:12:70.85:71,0,83	1/1:1,9:11:9.03:284,9,0	1/1:1,6:8:9.03:284,9,0	1/1:1,3:5:3.01:95,3,0	0/0:4,0:4:8.99:0,9,137	0/0:6,0:6:17.92:0,18,189	0/0:24,0:24:31.58:0,32,284	0/0:22,0:21:50.18:0,50,787	0/0:17,0:17:15.65:0,16,419	0/0:7,0:7:21.03:0,21,253	0/0:3,0:3:0.79:0,1,33	./.	1/1:0,0:2:6.02:100,6,0	1/1:0,0:2:3.01:42,3,0	1/1:0,10:10:15.05:474,15,0	0/1:17,0:16:63.88:180,0,64	0/0:34,0:34:35.39:0,35,334	0/1:10,0:10:30.09:30,0,57
chr10	15123983	.	G	GA	5118.12	PASS	AB=0.814;AC=22;AF=0.393;AN=56;BaseQRankSum=-9.179;DP=779;FS=11.406;HRun=11;HaplotypeScore=92.2845;InbreedingCoeff=0.8200;MQ=75.87;MQ0=4;MQRankSum=-0.817;QD=14.88;ReadPosRankSum=0.389;VQSLOD=4.2184;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,46:60:84.29:968,84,0	0/0:6,0:7:16.98:0,17,122	0/0:32,0:24:13.21:0,13,86	0/1:33,0:23:19.15:21,0,19	0/0:6,0:31:44.78:0,45,130	0/0:4,1:22:2.19:0,2,54	0/0:2,0:31:55:0,55,159	0/0:19,0:21:27.92:0,28,197	0/0:22,0:22:32.88:0,33,394	0/0:32,0:33:64.75:0,65,493	0/0:33,0:33:74.66:0,75,576	1/1:11,12:24:29.89:288,30,0	1/1:6,21:27:34.61:352,35,0	1/1:3,18:21:24.90:434,25,0	0/0:39,1:42:69.20:0,69,700	0/0:37,0:37:99:0,102,789	0/0:33,0:34:79.66:0,80,607	0/0:18,0:18:50.79:0,51,392	1/1:5,15:20:29.20:427,29,0	1/1:7,30:38:37.22:652,37,0	0/1:9,13:22:7.26:322,0,7	1/1:5,18:23:16.36:344,16,0	1/1:5,14:21:12.96:296,13,0	1/1:3,26:31:51.42:659,51,0	1/1:6,13:22:10.75:355,11,0	0/0:27,0:29:36.15:0,36,432	0/0:29,0:30:76.73:0,77,586	0/0:11,0:13:30.96:0,31,221
chr10	15126051	.	G	GC	3027.91	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-10.602;DP=787;FS=0.441;HRun=1;HaplotypeScore=74.1355;InbreedingCoeff=0.9987;MQ=82.84;MQ0=0;MQRankSum=-1.307;QD=37.85;ReadPosRankSum=-1.629;VQSLOD=3.4032;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,138,1760	0/0:11,0:11:33.11:0,33,428	0/0:23,0:23:66.18:0,66,806	0/0:22,0:22:24.56:0,25,475	0/0:19,0:19:57.19:0,57,740	0/0:30,0:30:90.28:0,90,1154	0/0:34,0:34:99:0,102,1297	0/0:28,0:28:78.24:0,78,989	0/0:38,0:38:99:0,108,1380	0/0:28,0:28:84.26:0,84,1066	0/0:9,0:9:27.09:0,27,349	0/0:39,0:39:99:0,108,1402	0/0:33,0:33:99:0,99,1285	0/0:33,0:33:93.28:0,93,1180	0/0:35,0:35:96.30:0,96,1232	0/0:53,0:53:99:0,160,2052	0/0:25,0:25:72.20:0,72,905	0/0:35,0:35:99:0,105,1342	1/1:0,28:28:83.60:1180,84,0	1/1:0,14:14:36.11:507,36,0	1/1:0,38:37:99:1484,99,0	0/0:30,0:30:84.26:0,84,1075	0/0:15,0:14:42.14:0,42,545	0/0:44,0:44:99:0,129,1675	0/0:15,0:15:45.15:0,45,584	0/0:32,0:32:96.27:0,96,1227	0/0:11,0:11:33.11:0,33,428	0/0:16,0:16:48.13:0,48,607
chr10	15126733	.	TCGC	T	10540.10	PASS	AB=0.667;AC=53;AF=0.981;AN=54;BaseQRankSum=-1.718;DP=384;FS=0.000;HRun=0;HaplotypeScore=62.3293;InbreedingCoeff=-0.0409;MQ=61.02;MQ0=0;MQRankSum=-1.718;QD=27.59;ReadPosRankSum=1.022;VQSLOD=4.2190;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,14:18:36.12:526,36,0	1/1:4,3:7:8.66:124,9,0	0/1:1,1:2:8.20:20,0,8	./.	1/1:4,5:9:12.04:176,12,0	1/1:2,8:10:18.06:263,18,0	1/1:3,36:39:93.31:1360,93,0	1/1:2,5:7:12.04:176,12,0	1/1:2,4:6:12.04:176,12,0	1/1:6,8:14:18.04:238,18,0	1/1:0,4:4:6.02:88,6,0	1/1:1,10:11:27.09:395,27,0	1/1:1,11:12:33.11:483,33,0	1/1:1,11:12:30.10:439,30,0	1/1:2,15:17:38.94:570,39,0	1/1:3,11:14:27.09:395,27,0	1/1:3,25:28:63.21:921,63,0	1/1:4,24:28:57.11:807,57,0	1/1:2,5:7:12.02:139,12,0	1/1:0,1:1:3.01:44,3,0	1/1:25,28:53:72.24:1053,72,0	1/1:5,6:11:12.04:175,12,0	1/1:1,2:3:6.02:88,6,0	1/1:4,30:34:75.72:1098,76,0	1/1:5,6:11:15.05:219,15,0	1/1:5,11:16:27.04:394,27,0	1/1:1,3:4:6.02:88,6,0	1/1:1,3:4:6.02:88,6,0
chr10	15127424	.	CT	C	2161.42	PASS	AB=0.755;AC=30;AF=0.536;AN=56;BaseQRankSum=7.761;DP=619;FS=5.808;HRun=16;HaplotypeScore=77.2257;InbreedingCoeff=0.4530;MQ=74.78;MQ0=4;MQRankSum=-3.414;QD=5.21;ReadPosRankSum=3.204;VQSLOD=2.5560;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,1:25:41.90:0,42,340	0/1:6,6:12:50.50:66,0,51	0/0:29,1:15:7.17:0,7,39	0/1:22,1:15:5.93:6,0,32	1/1:7,0:20:23.34:72,23,0	1/1:5,0:22:24.42:70,24,0	1/1:6,1:19:27.31:88,27,0	0/1:14,11:28:4.03:168,0,4	1/1:4,10:16:24.60:137,25,0	1/1:12,17:33:51.96:292,52,0	0/1:11,9:20:64.13:93,0,64	0/1:14,2:20:15.36:15,0,84	0/0:13,2:19:8.79:0,9,170	0/0:22,1:23:28.27:0,28,309	1/1:9,11:21:11.27:162,11,0	1/1:7,15:22:18.79:226,19,0	1/1:3,16:22:22.15:226,22,0	1/1:2,10:14:8.83:119,9,0	0/0:19,2:24:15.44:0,15,204	0/0:19,1:23:31.66:0,32,260	0/0:13,0:15:21.71:0,22,167	0/1:9,7:17:19.96:105,0,20	0/0:21,0:23:43.77:0,44,331	0/1:23,5:30:11.97:12,0,305	0/0:17,3:21:18.74:0,19,247	0/1:13,13:29:2.08:167,0,2	1/1:13,14:32:44.09:241,44,0	1/1:4,9:14:16.71:96,17,0
chr10	15128030	.	GT	G	10476.11	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-1.571;DP=310;FS=1.864;HRun=1;HaplotypeScore=51.7156;InbreedingCoeff=0.7103;MQ=56.67;MQ0=0;MQRankSum=-2.306;QD=35.88;ReadPosRankSum=3.047;VQSLOD=4.9978;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,14:14:33.11:461,33,0	1/1:0,4:4:12.04:168,12,0	0/0:6,2:3:7.53:0,8,71	0/0:8,2:4:5.81:0,6,44	1/1:0,7:6:18.06:250,18,0	1/1:0,8:8:21.07:294,21,0	1/1:0,7:7:21.07:293,21,0	1/1:0,15:13:39.13:544,39,0	1/1:0,12:12:30.10:419,30,0	1/1:0,8:8:24.08:336,24,0	1/1:1,12:12:24.08:336,24,0	1/1:0,11:11:24.08:336,24,0	1/1:0,10:10:27.09:377,27,0	1/1:0,7:7:18.06:251,18,0	1/1:0,18:18:51.17:712,51,0	1/1:0,17:16:42.14:587,42,0	1/1:0,9:9:27.09:377,27,0	1/1:0,8:7:21.07:293,21,0	1/1:0,20:20:60.20:838,60,0	1/1:0,15:14:33.11:461,33,0	1/1:0,5:5:9.03:126,9,0	1/1:0,2:2:3.01:42,3,0	1/1:0,3:3:6.02:84,6,0	1/1:0,4:4:12.04:168,12,0	1/1:0,19:19:48.16:671,48,0	1/1:0,13:12:36.12:503,36,0	1/1:0,33:31:81.27:1131,81,0	1/1:0,10:10:30.10:420,30,0
chr10	15128184	.	T	TA	3043.32	PASS	AB=0.567;AC=17;AF=0.315;AN=54;BaseQRankSum=-0.799;DP=429;FS=11.668;HRun=0;HaplotypeScore=74.8552;InbreedingCoeff=0.8986;MQ=81.79;MQ0=0;MQRankSum=-0.183;QD=20.29;ReadPosRankSum=0.006;VQSLOD=4.6544;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:75.25:0,75,1045	1/1:0,5:5:15.04:157,15,0	0/0:31,0:21:17.50:0,18,396	0/0:22,0:13:26.09:0,26,271	0/0:23,0:23:62.33:0,62,373	0/0:15,0:15:40.41:0,40,227	0/0:7,0:7:20.51:0,21,126	1/1:6,27:33:66.77:819,67,0	1/1:1,9:10:22.89:255,23,0	1/1:1,11:12:32.93:326,33,0	0/1:4,13:17:13.63:313,0,14	0/0:13,0:13:39.13:0,39,539	0/0:9,0:9:24.08:0,24,331	0/0:9,0:9:21.07:0,21,293	0/0:15,0:15:43.41:0,43,253	0/0:21,0:21:52.62:0,53,317	1/1:1,18:19:43.94:472,44,0	0/0:26,0:26:45.78:0,46,358	0/0:17,0:17:42.07:0,42,228	0/0:11,0:11:27.82:0,28,144	0/0:4,0:4:11.70:0,12,69	./.	0/0:4,0:4:12.04:0,12,168	0/0:8,0:8:24.08:0,24,331	0/0:17,0:17:51.17:0,51,710	1/1:5,11:17:26.56:359,27,0	1/1:2,18:18:17.87:301,18,0	1/1:2,15:17:22.51:245,23,0
chr10	15128286	.	AT	A	987.85	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=7.746;DP=453;FS=7.533;HRun=8;HaplotypeScore=45.1473;InbreedingCoeff=0.9104;MQ=59.98;MQ0=4;MQRankSum=2.616;QD=22.97;ReadPosRankSum=-0.063;VQSLOD=3.7985;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:83.70:0,84,957	0/0:6,0:6:15.05:0,15,181	0/0:12,0:4:8.96:0,9,74	0/0:9,0:3:5.95:0,6,48	1/1:1,20:21:60.10:579,60,0	1/1:0,12:12:36.06:348,36,0	1/1:2,8:10:21.03:203,21,0	0/0:37,0:37:79.81:0,80,1118	0/0:9,0:9:18.06:0,18,217	0/0:15,0:15:38.95:0,39,448	0/0:21,0:21:63.18:0,63,750	0/0:17,0:17:48.15:0,48,580	0/0:7,0:7:15.05:0,15,181	0/0:12,0:12:30.08:0,30,349	0/0:20,0:20:54.14:0,54,629	0/0:25,0:25:69.20:0,69,821	0/0:24,0:24:47.03:0,47,675	0/0:22,0:22:53.71:0,54,604	0/0:23,0:23:69.20:0,69,823	0/0:12,0:12:30.09:0,30,362	0/0:6,0:6:18.06:0,18,217	0/0:4,0:4:12.04:0,12,144	0/0:5,0:5:15.05:0,15,181	0/0:9,0:9:21.06:0,21,254	0/0:26,0:26:51.16:0,51,616	0/0:14,0:14:33.09:0,33,389	0/0:26,0:26:54.15:0,54,638	0/0:19,0:19:48.13:0,48,567
chr10	15131386	.	GT	G	1760.40	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=11.110;DP=602;FS=4.420;HRun=1;HaplotypeScore=63.8226;InbreedingCoeff=0.9986;MQ=88.05;MQ0=0;MQRankSum=-1.021;QD=35.21;ReadPosRankSum=-0.043;VQSLOD=3.4493;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:33:99:0,99,1582	0/0:11,0:11:33.11:0,33,527	0/0:23,0:23:69.23:0,69,1083	0/0:22,0:22:37.78:0,38,949	1/1:0,11:11:33.11:461,33,0	1/1:0,21:21:60.20:835,60,0	1/1:0,18:18:45.11:607,45,0	0/0:30,0:30:90.30:0,90,1418	0/0:27,0:27:81.28:0,81,1294	0/0:23,0:23:66.23:0,66,1054	0/0:13,0:13:39.13:0,39,624	0/0:24,0:24:72.23:0,72,1128	0/0:22,0:22:66.23:0,66,1051	0/0:21,0:21:60.20:0,60,957	0/0:20,0:20:60.19:0,60,929	0/0:31,0:31:90.29:0,90,1413	0/0:27,0:27:78.27:0,78,1247	0/0:21,0:21:60.20:0,60,956	0/0:12,0:12:36.12:0,36,575	0/0:9,0:9:27.09:0,27,429	0/0:39,0:39:99:0,114,1776	0/0:20,0:20:60.19:0,60,933	0/0:12,0:12:36.12:0,36,576	0/0:29,0:29:84.29:0,84,1322	0/0:24,0:24:72.25:0,72,1149	0/0:34,0:34:99:0,99,1558	0/0:16,0:16:48.16:0,48,767	0/0:8,0:8:24.08:0,24,384
chr10	15132295	.	CA	C	3660.56	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=10.730;DP=790;FS=0.404;HRun=1;HaplotypeScore=118.2752;InbreedingCoeff=0.9998;MQ=83.99;MQ0=1;MQRankSum=-2.769;QD=38.13;ReadPosRankSum=1.037;VQSLOD=3.3558;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:45:99:0,129,1879	0/0:17,0:17:47.83:0,48,728	0/0:21,0:21:63.12:0,63,888	0/0:30,0:30:55.60:0,56,1233	0/0:25,0:25:75.19:0,75,1095	0/0:17,0:17:51.16:0,51,792	0/0:25,0:25:69.21:0,69,1055	0/0:36,0:36:99:0,105,1618	0/0:36,0:36:99:0,108,1721	0/0:30,0:30:87.30:0,87,1391	0/0:21,0:21:63.21:0,63,1004	0/0:31,0:31:90.28:0,90,1390	0/0:28,0:28:84.26:0,84,1293	0/0:22,0:22:66.21:0,66,1027	0/0:37,0:37:99:0,108,1676	0/0:29,0:28:87.28:0,87,1366	0/0:44,0:44:99:0,132,2059	0/0:30,0:30:90.24:0,90,1363	1/1:0,17:17:48.15:652,48,0	1/1:2,21:23:69.17:917,69,0	1/1:0,56:56:99:2092,151,0	0/0:24,0:24:69.20:0,69,1029	0/0:10,0:10:30.09:0,30,452	0/0:33,0:33:99:0,99,1531	0/0:22,0:22:63.20:0,63,981	0/0:29,0:28:84.28:0,84,1319	0/0:28,0:28:84.25:0,84,1294	0/0:23,0:23:63.21:0,63,999
chr10	15132789	.	A	AAAAC	4647.08	PASS	AB=0.881;AC=29;AF=0.518;AN=56;BaseQRankSum=-0.117;DP=597;FS=8.234;HRun=0;HaplotypeScore=140.3946;InbreedingCoeff=0.5740;MQ=48.45;MQ0=40;MQRankSum=-7.858;QD=14.04;ReadPosRankSum=2.399;VQSLOD=4.0683;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:41:82.71:0,83,994	1/1:0,0:7:18.05:282,18,0	0/0:31,0:10:6.13:0,6,126	0/0:16,0:8:10.07:0,10,80	1/1:2,1:25:41.91:622,42,0	1/1:2,0:13:12.04:197,12,0	1/1:1,0:16:15.03:242,15,0	1/1:6,0:21:7.64:355,8,0	1/1:2,0:15:30.57:488,31,0	1/1:4,0:15:29.80:344,30,0	1/1:2,0:11:8.99:153,9,0	0/0:28,0:26:50.04:0,50,468	0/0:10,0:10:21.02:0,21,278	0/0:18,0:18:47.29:0,47,480	0/1:31,0:31:27.94:28,0,273	0/1:22,0:21:17.29:17,0,182	1/1:5,0:18:32.90:540,33,0	0/0:25,0:19:26.75:0,27,227	1/1:13,0:24:2:249,2,0	0/1:10,0:20:78.70:133,0,79	0/1:13,0:10:10:69,0,10	0/0:19,0:19:43.62:0,44,443	0/0:27,0:26:65.04:0,65,664	0/0:26,0:23:50.76:0,51,695	0/0:18,0:19:45.85:0,46,486	1/1:2,0:23:46.90:585,47,0	0/1:20,0:21:14.35:169,0,14	1/1:5,0:13:12.04:173,12,0
chr10	15132792	.	A	ACAAC	6580.55	PASS	AB=0.872;AC=31;AF=0.554;AN=56;BaseQRankSum=1.813;DP=599;FS=14.012;HRun=0;HaplotypeScore=138.2809;InbreedingCoeff=0.6956;MQ=53.27;MQ0=34;MQRankSum=-3.814;QD=19.70;ReadPosRankSum=6.089;VQSLOD=3.5811;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:41:91.15:0,91,1488	1/1:7,0:7:18.06:381,18,0	0/0:36,0:12:24.71:0,25,274	0/0:20,0:11:25.64:0,26,242	1/1:24,0:24:44.88:871,45,0	1/1:13,0:12:12.04:268,12,0	1/1:15,0:15:17.92:340,18,0	1/1:20,0:20:25.99:569,26,0	1/1:13,0:13:33.04:679,33,0	1/1:19,0:17:12.79:520,13,0	1/1:11,0:11:11.94:225,12,0	0/0:29,0:27:62.86:0,63,836	0/0:9,0:9:24.07:0,24,419	0/0:17,0:17:48.15:0,48,741	1/1:30,0:30:5.90:228,6,0	1/1:22,0:21:6.11:175,6,0	1/1:24,1:23:35.80:765,36,0	1/1:24,0:18:3.60:77,4,0	0/1:26,0:25:52.89:53,0,260	0/1:20,0:18:63.26:63,0,221	0/0:14,0:10:4.63:0,5,144	0/0:19,0:19:51.07:0,51,754	0/0:27,0:26:72.12:0,72,1113	0/0:27,0:24:50.94:0,51,909	0/0:22,0:22:57.11:0,57,851	1/1:24,0:23:56.51:909,57,0	0/1:9,9:23:39.49:214,0,39	1/1:17,0:12:12.04:244,12,0
chr10	15136864	.	T	TA	3013.25	PASS	AB=0.576;AC=27;AF=0.519;AN=52;BaseQRankSum=-10.608;DP=307;FS=1.105;HRun=12;HaplotypeScore=42.7755;InbreedingCoeff=0.6746;MQ=56.59;MQ0=1;MQRankSum=-2.173;QD=15.53;ReadPosRankSum=0.591;VQSLOD=4.2599;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,15:20:32.89:306,33,0	0/1:2,4:6:6.88:102,0,7	0/0:1,0:1:2.98:0,3,22	0/0:1,0:1:2.97:0,3,20	0/0:2,0:9:14.26:0,14,42	0/0:3,0:11:14.26:0,14,42	0/0:3,0:10:14.26:0,14,42	1/1:11,24:34:53.65:524,54,0	1/1:4,2:6:8.97:77,9,0	1/1:4,4:10:18.74:159,19,0	1/1:1,9:11:23.87:219,24,0	1/1:1,1:2:3:29,3,0	./.	1/1:0,7:8:20.87:189,21,0	0/0:0,0:5:10.19:0,10,29	0/0:1,0:10:18.33:0,18,53	1/1:4,29:33:63.48:689,63,0	0/0:5,0:27:40.67:0,41,117	0/0:7,0:18:19.92:0,20,64	0/0:2,0:9:12.21:0,12,35	0/0:2,0:6:5.79:0,6,17	1/1:0,1:1:3:29,3,0	./.	0/1:2,6:8:0.81:154,0,1	0/1:2,8:10:6.89:101,0,7	1/1:6,8:14:14.82:130,15,0	1/1:4,10:14:21:196,21,0	1/1:4,9:13:32.91:299,33,0
chr10	15137089	.	T	TAA	3066.78	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-5.822;DP=465;FS=8.622;HRun=12;HaplotypeScore=64.1895;InbreedingCoeff=0.9262;MQ=68.02;MQ0=0;MQRankSum=0.690;QD=18.25;ReadPosRankSum=-2.233;VQSLOD=1.6455;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:29:71.65:0,72,644	1/1:0,7:8:14.74:162,15,0	0/0:12,0:12:7.29:0,7,65	0/0:6,0:6:6.19:0,6,56	0/0:6,0:20:33.52:0,34,151	0/0:1,0:16:35.66:0,36,154	0/0:0,0:17:38.27:0,38,165	1/1:9,22:38:74.25:912,74,0	1/1:1,10:13:17.55:219,18,0	1/1:5,5:13:17.03:186,17,0	1/1:3,9:13:20.96:240,21,0	0/0:8,0:8:14.97:0,15,139	0/0:15,0:17:29.20:0,29,239	0/0:20,0:21:35.60:0,36,366	0/0:19,0:19:38.88:0,39,355	0/0:16,0:19:32.38:0,32,273	1/1:2,17:24:45.59:505,46,0	0/0:25,0:27:68.48:0,68,606	0/0:18,0:20:14.39:0,14,169	0/0:12,0:13:23.64:0,24,206	0/0:10,0:10:23.98:0,24,222	0/0:6,0:7:11.88:0,12,158	0/0:6,0:7:11.88:0,12,158	0/0:16,0:18:29.77:0,30,324	0/0:10,0:10:14.86:0,15,139	1/1:5,11:19:35.51:380,36,0	1/1:3,25:29:50.57:624,51,0	1/1:2,9:11:4.83:47,5,0
chr10	15137312	.	TAAGGA	T	1783.58	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.600;DP=687;FS=3.234;HRun=0;HaplotypeScore=131.1734;InbreedingCoeff=0.9970;MQ=90.53;MQ0=0;MQRankSum=-6.116;QD=39.64;ReadPosRankSum=0.454;VQSLOD=3.5413;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,117,3476	0/0:10,0:10:30.09:0,30,855	0/0:21,0:21:57.18:0,57,1410	0/0:45,0:43:36.60:0,37,1767	1/1:0,11:11:27.09:560,27,0	1/1:0,11:11:24.08:497,24,0	1/1:2,21:23:42.14:869,42,0	0/0:37,0:37:99:0,99,2878	0/0:30,0:30:84.28:0,84,2515	0/0:14,0:14:42.14:0,42,1255	0/0:16,0:16:48.12:0,48,1237	0/0:28,0:28:75.25:0,75,2236	0/0:24,0:24:60.21:0,60,1772	0/0:30,0:30:87.29:0,87,2567	0/0:31,0:31:90.31:0,90,2687	0/0:27,0:27:78.25:0,78,2237	0/0:38,0:38:99:0,114,3331	0/0:30,0:30:84.23:0,84,2440	0/0:29,0:29:81.26:0,81,2279	0/0:15,0:15:39.13:0,39,1133	0/0:36,0:36:96.31:0,96,2799	0/0:11,0:11:33.11:0,33,975	0/0:11,0:11:33.11:0,33,936	0/0:33,0:33:99:0,99,2861	0/0:7,0:7:21.07:0,21,643	0/0:31,0:31:90.31:0,90,2745	0/0:31,0:31:87.30:0,87,2612	0/0:17,0:17:48.16:0,48,1476
chr10	15138050	.	CTT	C	493.84	PASS	AB=0.982;AC=14;AF=0.250;AN=56;BaseQRankSum=-1.924;DP=587;FS=0.000;HRun=15;HaplotypeScore=111.8320;InbreedingCoeff=-0.0305;MQ=53.72;MQ0=23;MQRankSum=3.528;QD=2.30;ReadPosRankSum=2.327;VQSLOD=-0.3018;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:98.69:0,99,1108	0/1:5,0:5:18.24:40,0,18	0/0:43,0:8:8.61:0,9,54	0/0:37,0:4:5.87:0,6,44	0/0:26,0:25:21.10:0,21,215	0/0:18,0:17:33.72:0,34,263	0/0:21,0:21:25.48:0,25,164	0/1:26,2:27:28.94:127,0,29	0/1:13,1:14:20.29:90,0,20	0/1:22,0:20:13.36:13,0,114	0/1:8,0:7:15.71:42,0,16	0/0:22,0:22:29.28:0,29,302	0/0:22,0:21:40.95:0,41,420	0/0:17,0:15:35.95:0,36,373	0/1:21,0:21:9.14:9,0,75	1/1:27,0:27:16.88:102,17,0	0/1:21,0:20:26.90:27,0,71	0/0:18,0:18:5.25:0,5,56	0/0:25,0:23:17.58:0,18,93	1/1:10,0:10:2.52:10,3,0	0/0:16,0:15:3.91:0,4,11	0/0:14,0:14:29.91:0,30,362	0/0:15,0:17:35.07:0,35,394	0/0:16,0:17:25.86:0,26,251	0/0:17,0:17:34.95:0,35,372	0/1:22,0:20:40.06:40,0,89	0/1:20,1:21:31:111,0,31	0/1:14,0:12:39.27:39,0,63
chr10	15138065	.	TG	T	4584.01	PASS	AB=1.000;AC=40;AF=0.714;AN=56;BaseQRankSum=6.223;DP=561;FS=2.545;HRun=1;HaplotypeScore=95.0547;InbreedingCoeff=0.6272;MQ=44.80;MQ0=35;MQRankSum=-2.706;QD=10.86;ReadPosRankSum=-1.212;VQSLOD=2.5178;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:40:34.22:0,34,602	1/1:5,0:5:10.92:55,11,0	0/1:37,0:4:4.22:22,0,4	0/0:30,1:2:5.85:0,6,35	1/1:24,2:24:54.16:401,54,0	1/1:15,0:13:34.22:186,34,0	1/1:13,3:16:31.77:276,32,0	1/1:32,0:29:48.22:276,48,0	1/1:15,1:16:19.85:162,20,0	1/1:27,0:21:35.07:276,35,0	1/1:9,0:7:15.74:125,16,0	0/1:19,0:18:9.21:9,0,170	0/0:19,0:18:18.13:0,18,214	0/1:14,0:12:19.60:20,0,64	1/1:14,5:19:40.06:357,40,0	1/1:17,5:21:47.74:520,48,0	1/1:20,0:18:31.82:154,32,0	1/1:18,3:18:46.21:427,46,0	1/1:22,0:18:51.10:373,51,0	1/1:13,0:13:20.12:153,20,0	1/1:15,1:13:28.63:186,29,0	0/0:14,0:14:33.40:0,33,306	0/0:15,0:14:29.29:0,29,232	0/1:16,0:16:7.58:8,0,117	0/0:19,0:18:2.41:0,2,250	1/1:23,0:21:28.01:267,28,0	1/1:21,1:21:39.45:238,39,0	1/1:12,0:9:17.47:94,17,0
chr10	15138098	.	GT	G	486.19	PASS	AB=0.865;AC=10;AF=0.179;AN=56;BaseQRankSum=-1.007;DP=503;FS=1.228;HRun=14;HaplotypeScore=100.9219;InbreedingCoeff=0.2365;MQ=47.36;MQ0=19;MQRankSum=3.374;QD=2.79;ReadPosRankSum=2.150;VQSLOD=0.4508;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:34,6:39:33.42:33,0,416	0/0:2,0:5:5.52:0,6,26	0/0:9,0:2:1.29:0,1,4	0/0:9,0:2:0:0,0,0	0/0:24,0:23:4.15:0,4,84	0/1:13,0:13:19.53:20,0,78	0/0:16,0:15:21.80:0,22,145	0/0:18,0:21:29.51:0,30,179	0/0:11,0:14:16.31:0,16,81	0/0:20,0:22:33.08:0,33,200	0/0:8,0:13:17.17:0,17,92	0/0:14,0:14:32.95:0,33,287	0/0:20,0:20:15.57:0,16,272	0/1:17,0:16:3.37:3,0,144	1/1:7,12:19:24.14:165,24,0	0/1:9,11:19:10.70:170,0,11	0/0:21,0:23:32.51:0,33,187	1/1:9,18:23:7.77:198,8,0	0/0:12,0:12:18.05:0,18,100	0/0:10,0:14:18.63:0,19,108	0/0:7,0:6:5.64:0,6,28	0/0:10,0:12:17.01:0,17,171	0/0:16,0:17:28.27:0,28,261	0/1:12,2:14:14.50:15,0,140	0/1:18,4:23:26.17:26,0,327	0/0:17,0:24:37.80:0,38,229	0/0:12,0:26:36.88:0,37,228	0/0:4,0:6:14.20:0,14,71
chr10	15138394	.	CGTGTGTGTGTGT	C	3774.54	PASS	AC=22;AF=0.458;AN=48;BaseQRankSum=5.742;DP=424;FS=1.524;HRun=0;HaplotypeScore=147.9653;InbreedingCoeff=0.7948;MQ=65.70;MQ0=5;MQRankSum=-7.096;QD=21.69;ReadPosRankSum=2.130;VQSLOD=3.0140;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:14,8:21:12.04:373,12,0	0/0:7,0:7:14.08:0,14,605	0/0:19,0:14:5.51:0,6,52	./.	1/1:6,0:8:3.01:70,3,0	1/1:11,0:19:24.08:670,24,0	1/1:18,0:22:6.02:150,6,0	0/0:26,0:26:9.03:0,9,241	0/0:7,0:9:6.49:0,6,299	0/0:13,0:19:48.16:0,48,2065	0/0:3,0:10:11.63:0,12,554	1/1:11,4:16:12.04:359,12,0	1/1:14,4:18:12.04:394,12,0	1/1:12,5:17:12.03:414,12,0	./.	./.	0/0:24,0:41:42.13:0,42,2041	./.	0/0:10,0:9:4.25:0,4,32	0/0:4,0:7:9.03:0,9,242	0/0:26,0:30:18.93:0,19,541	1/1:6,3:9:5.60:190,6,0	1/1:4,8:12:11.61:414,12,0	1/1:13,4:17:3.01:93,3,0	1/1:6,5:13:21.07:646,21,0	0/0:16,0:20:39.13:0,39,1472	0/0:10,0:10:18.04:0,18,508	0/0:10,0:10:18.06:0,18,907
chr10	15138537	.	CA	C	6941.32	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-2.119;DP=581;FS=1.088;HRun=10;HaplotypeScore=77.5874;InbreedingCoeff=0.9971;MQ=78.60;MQ0=0;MQRankSum=-0.008;QD=21.16;ReadPosRankSum=1.015;VQSLOD=5.7143;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,1:31:58.06:0,58,849	1/1:1,9:10:26.99:234,27,0	0/0:25,0:24:44.09:0,44,416	0/0:12,0:11:18.30:0,18,161	1/1:4,29:33:80.97:703,81,0	1/1:3,22:25:62.98:547,63,0	1/1:3,25:28:65.98:573,66,0	1/1:3,14:17:41.93:352,42,0	1/1:2,15:17:41.99:365,42,0	1/1:4,15:19:41.98:365,42,0	1/1:0,20:20:53.98:469,54,0	0/0:17,2:19:19.02:0,19,411	0/0:19,0:19:54.14:0,54,595	0/0:12,0:12:33.09:0,33,365	0/0:5,0:28:62.63:0,63,319	0/0:5,1:28:36.61:0,37,272	1/1:4,29:32:77.98:677,78,0	0/0:1,0:24:59.66:0,60,298	1/1:0,10:10:29.97:255,30,0	1/1:3,18:21:50.96:443,51,0	1/1:5,28:33:71.97:625,72,0	0/0:15,0:15:36.10:0,36,398	0/0:15,0:15:39.09:0,39,422	0/0:13,0:13:36.01:0,36,382	0/0:12,0:12:33.09:0,33,362	1/1:5,26:32:80.01:683,80,0	1/1:2,20:22:53.90:469,54,0	1/1:1,7:8:20.99:182,21,0
chr10	15148628	.	CA	C	4712.74	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.872;DP=837;FS=0.000;HRun=2;HaplotypeScore=92.5409;InbreedingCoeff=0.9985;MQ=86.31;MQ0=0;MQRankSum=-2.237;QD=35.70;ReadPosRankSum=3.871;VQSLOD=5.1157;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:60,0:60:99:0,181,2667	0/0:15,0:15:42.12:0,42,587	0/0:25,0:25:62.38:0,62,986	0/0:33,0:33:90.28:0,90,1264	0/0:21,0:21:57.19:0,57,849	0/0:21,0:20:60.20:0,60,899	0/0:28,0:28:84.25:0,84,1235	0/0:30,0:30:84.28:0,84,1242	0/0:34,0:34:99:0,102,1488	0/0:31,0:31:84.25:0,84,1173	0/0:17,0:17:48.16:0,48,714	0/0:51,0:51:99:0,147,2182	0/0:38,0:38:99:0,114,1667	0/0:43,0:43:99:0,129,1898	1/1:2,40:42:99:1441,111,0	1/1:0,49:49:99:1714,132,0	0/0:35,0:35:99:0,99,1459	1/1:0,41:41:99:1558,120,0	0/0:11,0:11:32.99:0,33,429	0/0:10,0:10:21.39:0,21,219	0/0:35,0:35:63.38:0,63,873	0/0:22,0:22:66.17:0,66,943	0/0:22,0:22:63.20:0,63,924	0/0:33,0:33:99:0,99,1484	0/0:15,0:15:45.14:0,45,655	0/0:29,0:29:87.29:0,87,1281	0/0:32,0:32:93.31:0,93,1391	0/0:14,0:14:42.14:0,42,629
chr10	15150860	.	GTAAC	G	3572.67	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=11.617;DP=761;FS=2.160;HRun=0;HaplotypeScore=121.8155;InbreedingCoeff=0.9998;MQ=78.51;MQ0=0;MQRankSum=-1.153;QD=42.03;ReadPosRankSum=-1.568;VQSLOD=3.8348;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,105,2680	0/0:10,0:10:30.10:0,30,793	0/0:22,0:22:56.93:0,57,1263	0/0:20,0:20:56.26:0,56,1253	0/0:25,0:25:75.24:0,75,1936	0/0:26,0:26:78.27:0,78,1946	0/0:17,0:17:51.14:0,51,1269	0/0:42,0:42:99:0,123,3014	0/0:24,0:24:66.23:0,66,1671	0/0:31,0:31:90.30:0,90,2374	0/0:18,0:18:54.19:0,54,1409	0/0:40,0:40:99:0,114,2985	0/0:22,0:22:63.18:0,63,1564	0/0:25,0:25:75.24:0,75,1948	0/0:52,0:52:99:0,156,3941	0/0:37,0:37:99:0,108,2753	0/0:36,0:36:99:0,102,2648	0/0:21,0:21:54.19:0,54,1359	1/1:3,24:27:69.11:1158,69,0	1/1:7,23:30:66.22:1184,66,0	1/1:1,27:28:66.23:1231,66,0	0/0:24,0:24:66.20:0,66,1656	0/0:21,0:21:57.20:0,57,1503	0/0:27,0:27:72.25:0,72,1894	0/0:25,0:25:75.26:0,75,1988	0/0:27,0:27:78.27:0,78,2073	0/0:33,0:32:96.33:0,96,2538	0/0:13,0:13:39.13:0,39,1018
chr10	15152362	.	G	GGAAA	31344.01	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-9.870;DP=778;FS=3.125;HRun=0;HaplotypeScore=119.4812;InbreedingCoeff=0.9985;MQ=80.44;MQ0=2;MQRankSum=-8.328;QD=66.55;ReadPosRankSum=0.001;VQSLOD=6.5955;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:74,0:74:99:0,208,3938	1/1:0,6:6:18.06:478,18,0	0/0:26,0:26:69.21:0,69,1195	0/0:19,0:18:42.14:0,42,747	1/1:3,17:20:45.07:1083,45,0	1/1:1,21:21:63.17:1660,63,0	1/1:6,15:23:51.13:1313,51,0	1/1:4,31:39:99:2856,114,0	1/1:2,24:29:75.22:1949,75,0	1/1:6,31:39:99:2826,108,0	1/1:3,14:18:48.04:1114,48,0	0/0:40,0:40:99:0,117,2251	0/0:33,0:33:99:0,99,1884	0/0:35,0:35:99:0,105,2034	1/1:4,32:36:96.29:2566,96,0	1/1:4,34:41:87.26:2320,87,0	1/1:2,27:29:69.24:1888,69,0	1/1:3,19:24:60.04:1553,60,0	1/1:6,12:18:48.16:1231,48,0	1/1:1,14:20:45.12:1128,45,0	1/1:4,29:35:87.21:2255,87,0	0/0:21,0:21:57.18:0,57,1069	0/0:15,0:15:42.14:0,42,812	0/0:27,0:27:78.25:0,78,1474	0/0:17,0:17:48.12:0,48,806	1/1:3,28:33:96.33:2581,96,0	1/1:1,27:29:69.08:1887,69,0	1/1:1,7:8:24.08:657,24,0
chr10	15152820	.	TGACAAAA	T	13077.78	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=17.477;DP=766;FS=7.211;HRun=0;HaplotypeScore=185.2505;InbreedingCoeff=0.9975;MQ=77.13;MQ0=1;MQRankSum=-16.136;QD=58.12;ReadPosRankSum=0.343;VQSLOD=4.4132;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,150,5826	1/1:1,17:18:45.15:1140,45,0	0/0:15,0:16:47.64:0,48,1194	0/0:26,0:26:65.43:0,65,2192	0/0:29,0:29:87.09:0,87,3378	0/0:21,0:21:60.21:0,60,2311	0/0:39,0:39:99:0,117,4412	1/1:5,27:32:81.25:1883,81,0	1/1:2,28:30:60.21:1571,60,0	1/1:4,23:27:69.24:1806,69,0	1/1:1,18:20:42.13:984,42,0	0/0:38,0:38:99:0,111,4252	0/0:35,0:35:99:0,102,3696	0/0:28,0:28:84.29:0,84,3232	0/0:39,0:39:99:0,114,4484	0/0:29,0:29:87.30:0,87,3384	1/1:4,29:33:57.12:1518,57,0	0/0:22,0:21:63.22:0,63,2475	0/0:18,0:18:54.19:0,54,2171	0/0:23,0:23:69.24:0,69,2533	0/0:29,0:29:84.29:0,84,3289	0/0:26,0:26:78.25:0,78,2911	0/0:24,0:24:72.23:0,72,2712	0/0:27,0:27:78.27:0,78,2949	0/0:21,0:21:63.19:0,63,2480	1/1:0,25:25:72.24:1764,72,0	1/1:0,33:33:78.27:2007,78,0	1/1:0,7:7:15.05:404,15,0
chr10	15154154	.	CAGGA	C	3132.46	PASS	AB=0.673;AC=32;AF=0.667;AN=48;BaseQRankSum=-7.790;DP=464;FS=35.501;HRun=0;HaplotypeScore=73.8514;InbreedingCoeff=0.4690;MQ=38.00;MQ0=88;MQRankSum=-2.066;QD=9.58;ReadPosRankSum=1.920;VQSLOD=1.1033;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,13:12:15.05:228,15,0	1/1:0,6:6:11.93:169,12,0	./.	./.	0/0:1,0:10:5.96:0,6,47	0/0:11,0:8:14.95:0,15,136	0/0:21,0:5:9.01:0,9,84	./.	0/1:12,12:16:9.19:210,0,9	1/1:10,5:9:15.05:238,15,0	./.	1/1:19,7:11:14.63:181,15,0	1/1:9,8:10:6.02:91,6,0	1/1:8,13:11:18.06:274,18,0	1/1:15,14:19:21.07:310,21,0	1/1:17,7:17:18.06:269,18,0	1/1:20,9:16:24.08:362,24,0	1/1:11,4:11:3.01:46,3,0	0/0:10,0:5:5.99:0,6,56	0/0:11,0:7:9.91:0,10,103	0/0:52,0:36:43.85:0,44,400	0/1:3,5:6:28.41:126,0,28	1/1:8,4:7:12.04:183,12,0	0/1:18,19:25:1.11:340,0,1	1/1:1,6:4:3.01:46,3,0	1/1:12,2:8:5.38:53,5,0	0/1:10,5:7:15.20:124,0,15	1/1:1,3:3:3.01:46,3,0
chr10	15154712	.	GC	G	677.98	PASS	AB=0.640;AC=49;AF=0.907;AN=54;BaseQRankSum=0.582;DP=177;FS=2.601;HRun=2;HaplotypeScore=271.9410;InbreedingCoeff=0.1768;MQ=64.22;MQ0=0;MQRankSum=1.146;QD=3.90;ReadPosRankSum=5.105;VQSLOD=0.4451;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:5,3:8:4.87:17,5,0	1/1:0,2:2:3.06:8,3,0	1/1:4,0:4:7.38:38,7,0	0/1:8,0:8:2.11:2,0,20	1/1:0,3:4:4.33:24,4,0	1/1:0,7:7:9.01:37,9,0	1/1:1,1:3:1.82:5,2,0	./.	1/1:0,8:8:10.87:37,11,0	1/1:2,5:7:7.47:24,7,0	0/1:0,8:8:0.26:7,0,0	1/1:1,8:9:17.38:67,17,0	1/1:1,6:7:8.67:33,9,0	1/1:1,5:6:10.84:35,11,0	1/1:0,8:8:9.84:37,10,0	1/1:1,4:5:5.81:22,6,0	1/1:1,3:4:6.01:18,6,0	1/1:0,3:3:1.25:7,1,0	1/1:1,3:4:2.37:14,2,0	1/1:2,12:14:14.87:69,15,0	1/1:1,2:3:2.16:8,2,0	1/1:1,9:10:5.40:51,5,0	0/1:1,12:13:1.35:31,0,1	0/0:0,2:2:0.89:0,1,2	1/1:2,7:9:9.63:56,10,0	1/1:0,7:7:10.39:40,10,0	1/1:1,9:10:18.27:63,18,0	1/1:0,2:2:4.82:17,5,0
chr10	15154740	.	G	GA	3692.65	PASS	AB=0.500;AC=47;AF=0.839;AN=56;BaseQRankSum=1.451;DP=214;FS=22.404;HRun=1;HaplotypeScore=362.0714;InbreedingCoeff=0.4687;MQ=37.77;MQ0=0;MQRankSum=-0.818;QD=17.84;ReadPosRankSum=1.835;VQSLOD=0.0801;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,12:12:16.26:145,16,0	1/1:0,4:4:11.51:96,12,0	0/0:2,0:2:5.23:0,5,45	0/0:1,0:1:1.82:0,2,5	0/1:0,5:5:4.30:46,0,4	1/1:0,7:7:14.77:126,15,0	0/0:0,2:2:1.55:0,2,4	1/1:0,1:1:0.47:1,0,0	1/1:0,9:9:25.14:182,25,0	1/1:1,14:15:33.03:327,33,0	1/1:0,15:15:25.37:205,25,0	1/1:0,8:8:23.86:202,24,0	1/1:0,9:9:25.25:211,25,0	1/1:0,5:5:14.92:128,15,0	1/1:0,10:10:23.19:179,23,0	1/1:0,6:6:17.83:160,18,0	1/1:0,3:3:6:55,6,0	1/1:0,4:4:1.46:29,1,0	1/1:0,3:3:2.85:33,3,0	1/1:0,20:20:30.60:301,31,0	0/0:0,2:2:0:0,0,0	1/1:0,14:14:21.07:203,21,0	1/1:0,19:19:36.83:302,37,0	1/1:0,4:4:6.01:25,6,0	1/1:0,9:9:11.31:126,11,0	1/1:0,12:12:30.45:273,30,0	1/1:0,11:11:30.20:278,30,0	1/1:0,2:2:6.01:61,6,0
chr10	15154893	.	GC	G	8585.52	PASS	AC=52;AF=1.000;AN=52;DP=291;FS=0.000;HRun=1;HaplotypeScore=350.3200;InbreedingCoeff=-0.0280;MQ=28.74;MQ0=0;QD=29.50;VQSLOD=3.2213;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,7:7:6.02:77,6,0	1/1:1,8:9:21.07:269,21,0	./.	./.	1/1:0,15:15:36.12:464,36,0	1/1:0,6:6:18.06:232,18,0	1/1:0,10:10:21.07:271,21,0	1/1:0,9:9:27.09:348,27,0	1/1:0,11:11:30.10:386,30,0	1/1:0,21:21:59.82:770,60,0	1/1:0,11:11:27.05:330,27,0	1/1:1,18:19:42.11:520,42,0	1/1:0,14:14:33.11:424,33,0	1/1:0,12:12:27.09:348,27,0	1/1:0,8:8:18.06:232,18,0	1/1:0,19:19:51.17:657,51,0	1/1:0,5:5:12.04:155,12,0	1/1:0,4:4:9.03:116,9,0	1/1:0,4:4:9.03:113,9,0	1/1:0,23:23:48.16:619,48,0	1/1:0,1:1:3.01:39,3,0	1/1:0,18:18:38.91:476,39,0	1/1:0,10:10:12.04:155,12,0	1/1:0,2:2:3.01:39,3,0	1/1:1,7:8:12.04:153,12,0	1/1:0,21:21:60.20:773,60,0	1/1:0,19:19:39.13:501,39,0	1/1:0,5:5:9.03:116,9,0
chr10	15154951	.	TG	T	13236.22	PASS	AC=54;AF=1.000;AN=54;DP=367;FS=0.000;HRun=1;HaplotypeScore=388.9959;InbreedingCoeff=-0.0105;MQ=34.31;MQ0=0;QD=36.07;VQSLOD=2.7452;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,19:19:51.08:659,51,0	1/1:0,8:8:21.07:293,21,0	1/1:1,1:2:3.01:41,3,0	./.	1/1:0,21:21:41.76:516,42,0	1/1:0,6:6:18.06:251,18,0	1/1:0,16:16:45.15:620,45,0	1/1:0,19:19:57.19:791,57,0	1/1:0,12:12:36.08:481,36,0	1/1:0,19:19:51.17:707,51,0	1/1:0,16:16:36.01:438,36,0	1/1:0,22:22:66.18:891,66,0	1/1:0,22:22:66.18:899,66,0	1/1:0,18:18:54.18:754,54,0	1/1:0,14:14:42.07:544,42,0	1/1:0,15:15:45.15:628,45,0	1/1:0,9:9:18.06:243,18,0	1/1:0,10:10:24.08:335,24,0	1/1:0,4:4:12.04:168,12,0	1/1:0,16:16:42.01:520,42,0	1/1:0,7:7:16.82:185,17,0	1/1:0,19:19:51.04:645,51,0	1/1:0,11:11:30.10:418,30,0	1/1:0,13:13:24.92:304,25,0	1/1:0,12:12:30.10:418,30,0	1/1:0,19:19:57.19:795,57,0	1/1:0,15:15:42.11:565,42,0	1/1:0,3:3:9.03:126,9,0
chr10	15155682	.	G	GTT	5158.62	PASS	AB=0.879;AC=38;AF=0.679;AN=56;BaseQRankSum=2.689;DP=585;FS=27.248;HRun=13;HaplotypeScore=125.2035;InbreedingCoeff=0.1904;MQ=73.00;MQ0=8;MQRankSum=-3.342;QD=10.24;ReadPosRankSum=-2.527;VQSLOD=0.8317;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:34,0:36:20.64:21,0,298	1/1:12,5:18:35.58:413,36,0	0/1:43,0:25:28.04:28,0,80	0/0:43,0:15:10.82:0,11,58	0/1:9,0:26:2.64:95,0,3	1/1:16,1:22:18.26:292,18,0	1/1:16,0:20:13.56:56,14,0	1/1:24,11:35:42.10:402,42,0	1/1:7,7:16:7.13:58,7,0	1/1:9,4:14:27.79:305,28,0	1/1:9,9:19:48.16:559,48,0	0/0:12,0:12:8.82:0,9,78	0/0:16,0:16:23.66:0,24,197	0/1:13,0:14:21.70:22,0,67	1/1:5,7:13:15.83:176,16,0	1/1:12,8:21:36.92:436,37,0	1/1:6,17:23:30.02:352,30,0	1/1:13,3:16:35.69:285,36,0	0/1:15,2:21:27.68:170,0,28	0/1:12,0:17:18.96:95,0,19	0/1:13,0:18:11.29:35,0,11	0/1:10,0:10:6.06:6,0,113	0/1:15,0:14:9.37:9,0,140	0/0:10,0:10:23.80:0,24,199	0/1:18,0:20:12.83:13,0,184	1/1:7,16:25:47.13:505,47,0	1/1:20,11:33:53.12:786,53,0	1/1:1,3:3:3.01:41,3,0
chr10	15156362	.	TCCTCAAATCCCGCAATGA	T	1896.44	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=6.034;DP=745;FS=3.960;HRun=0;HaplotypeScore=339.6970;InbreedingCoeff=0.9522;MQ=83.40;MQ0=0;MQRankSum=-6.123;QD=38.70;ReadPosRankSum=1.321;VQSLOD=1.9983;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:41:99:0,123,10462	0/0:15,0:15:42.14:0,42,3394	0/0:26,0:26:69.22:0,69,4266	0/0:23,0:23:63.09:0,63,3423	1/1:3,4:7:6.02:312,6,0	1/1:7,8:15:15.05:780,15,0	1/1:17,10:27:18.06:936,18,0	0/0:33,0:33:96.33:0,96,6398	0/0:37,0:37:99:0,108,7894	0/0:32,0:32:96.32:0,96,7711	0/0:17,0:17:48.16:0,48,3866	0/0:28,0:28:84.29:0,84,6750	0/0:30,0:30:90.31:0,90,7466	0/0:29,0:29:84.29:0,84,7020	0/0:38,0:38:99:0,111,9268	0/0:35,0:35:99:0,102,7741	0/0:24,0:24:72.20:0,72,5472	0/0:21,0:21:63.22:0,63,4860	0/0:25,0:25:69.22:0,69,4408	0/0:24,0:24:69.24:0,69,5317	0/0:49,0:49:99:0,144,11509	0/0:26,0:26:78.26:0,78,6201	0/0:16,0:16:48.16:0,48,3813	0/0:28,0:28:81.26:0,81,6207	0/0:20,0:20:57.20:0,57,4879	0/0:34,0:34:99:0,102,8498	0/0:34,0:34:93.32:0,93,7735	0/0:10,0:10:30.10:0,30,2019
chr10	15157297	.	AAAAAC	A	5104.34	PASS	AB=1.000;AC=27;AF=0.482;AN=56;BaseQRankSum=8.314;DP=661;FS=12.322;HRun=0;HaplotypeScore=145.1333;InbreedingCoeff=0.7985;MQ=53.35;MQ0=40;MQRankSum=-10.933;QD=15.95;ReadPosRankSum=-1.422;VQSLOD=3.1853;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:36:68.35:0,68,1268	1/1:6,0:6:11.94:139,12,0	0/0:53,0:11:14.45:0,14,162	0/0:37,0:9:15.13:0,15,105	1/1:21,2:23:48.80:546,49,0	1/1:20,1:19:18.01:198,18,0	1/1:16,1:17:21.36:236,21,0	1/1:31,0:31:65.72:658,66,0	1/1:20,0:19:39.37:477,39,0	1/1:25,0:25:62.96:631,63,0	0/1:20,0:19:2.25:315,0,2	0/0:18,0:17:41.86:0,42,695	0/0:22,0:22:48.16:0,48,1047	0/0:19,0:19:40.16:0,40,640	0/1:18,0:13:31.66:41,0,32	0/1:11,0:11:6.10:24,0,6	1/1:28,0:26:56.10:584,56,0	1/1:27,0:25:5.78:30,6,0	0/0:24,0:21:46.92:0,47,500	0/0:38,0:37:98.12:0,98,1136	0/0:23,0:21:54.10:0,54,685	0/0:12,0:12:29.06:0,29,472	0/0:24,0:24:50.02:0,50,1140	0/0:13,0:12:33.04:0,33,657	0/0:21,0:20:36.01:0,36,764	1/1:27,0:25:45.66:353,46,0	1/1:38,0:34:32.88:686,33,0	1/1:8,0:6:14.53:188,15,0
chr10	15157298	.	AAAAC	A	5390.11	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=7.830;DP=662;FS=11.046;HRun=0;HaplotypeScore=135.6331;InbreedingCoeff=0.9534;MQ=53.52;MQ0=39;MQRankSum=-11.103;QD=16.95;ReadPosRankSum=-1.434;VQSLOD=3.3824;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:37:81.12:0,81,1104	1/1:6,0:6:11.96:115,12,0	0/0:53,0:11:13.65:0,14,128	0/0:37,0:9:14.42:0,14,88	1/1:20,3:23:57.60:643,58,0	1/1:6,14:18:18.06:239,18,0	1/1:14,2:16:32.10:352,32,0	1/1:31,0:31:70.58:592,71,0	1/1:20,0:19:43.94:433,44,0	1/1:27,0:27:73.68:671,74,0	1/1:21,0:20:9.58:246,10,0	0/0:18,0:17:39.75:0,40,582	0/0:22,0:22:48.15:0,48,883	0/0:19,0:19:40.07:0,40,524	1/1:18,0:13:4.37:86,4,0	1/1:11,0:11:11.37:72,11,0	1/1:28,0:26:56.89:592,57,0	1/1:27,0:25:18.42:99,18,0	0/0:24,0:21:46.59:0,47,406	0/0:39,0:38:96.57:0,97,871	0/0:23,0:21:54.01:0,54,528	0/0:12,0:12:27:0,27,404	0/0:24,0:24:27.21:0,27,924	0/0:13,0:12:32.82:0,33,546	0/0:22,0:21:44.80:0,45,664	1/1:26,0:24:51.54:387,52,0	1/1:36,0:33:60.02:705,60,0	1/1:8,0:6:13.28:158,13,0
chr10	15157299	.	AAAC	A	5690.79	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=7.846;DP=657;FS=6.143;HRun=0;HaplotypeScore=125.0760;InbreedingCoeff=0.9792;MQ=53.79;MQ0=35;MQRankSum=-10.640;QD=17.90;ReadPosRankSum=-1.650;VQSLOD=3.9666;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:36:70.58:0,71,894	1/1:6,0:6:11.96:118,12,0	0/0:53,0:11:13.51:0,14,109	0/0:37,0:9:11.64:0,12,80	1/1:21,2:23:58.38:562,58,0	1/1:18,2:18:18.05:208,18,0	1/1:16,1:17:37.36:329,37,0	1/1:32,0:32:74.82:678,75,0	1/1:17,2:19:44.85:457,45,0	1/1:25,3:28:77.80:749,78,0	1/1:19,0:19:24.03:266,24,0	0/0:18,0:17:42.64:0,43,468	0/0:22,0:22:48.11:0,48,737	0/0:19,0:19:20.67:0,21,383	1/1:16,0:12:22.37:186,22,0	1/1:11,1:12:14.82:130,15,0	1/1:28,0:26:56.87:540,57,0	1/1:28,0:26:19.75:160,20,0	0/0:23,0:20:45.46:0,45,324	0/0:38,0:37:89.11:0,89,607	0/0:22,0:20:53.45:0,53,381	0/0:12,0:12:28.53:0,29,347	0/0:24,0:24:23.08:0,23,729	0/0:12,0:12:32.18:0,32,413	0/0:22,0:21:42.72:0,43,556	1/1:25,1:24:53.67:428,54,0	1/1:35,1:33:75.26:731,75,0	1/1:8,0:6:13.85:150,14,0
chr10	15157300	.	AAC	A	5406.93	PASS	AB=1.000;AC=31;AF=0.554;AN=56;BaseQRankSum=7.720;DP=641;FS=8.371;HRun=0;HaplotypeScore=115.0752;InbreedingCoeff=0.9149;MQ=54.26;MQ0=31;MQRankSum=-10.776;QD=16.74;ReadPosRankSum=-1.879;VQSLOD=4.0384;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:35:54.87:0,55,731	1/1:6,0:6:11.96:109,12,0	0/0:53,0:11:10.87:0,11,81	0/0:37,0:9:9.22:0,9,74	1/1:21,2:23:59.10:460,59,0	1/1:20,0:18:18:155,18,0	1/1:15,1:16:38.66:297,39,0	1/1:31,1:32:74.71:633,75,0	1/1:18,0:18:44.87:416,45,0	1/1:28,0:28:77.75:681,78,0	1/1:10,1:18:26.02:251,26,0	0/0:18,0:17:39.59:0,40,365	0/0:22,0:22:47.09:0,47,569	0/1:18,0:18:6.70:7,0,274	1/1:11,3:12:29.16:267,29,0	1/1:1,11:12:15.04:170,15,0	1/1:26,0:25:56.89:495,57,0	1/1:3,24:26:19.87:220,20,0	0/0:23,0:20:37.29:0,37,247	0/0:36,0:35:73.47:0,73,388	0/0:22,0:20:49.94:0,50,250	0/0:13,0:13:21.14:0,21,292	0/0:24,0:24:20.67:0,21,542	0/0:12,0:12:30.31:0,30,304	0/0:22,0:21:30.04:0,30,415	1/1:24,0:22:53.62:405,54,0	1/1:33,0:31:77.75:701,78,0	1/1:8,0:6:14.53:141,15,0
chr10	15157301	.	AC	A	4867.72	PASS	AB=0.947;AC=31;AF=0.554;AN=56;BaseQRankSum=7.817;DP=630;FS=19.491;HRun=1;HaplotypeScore=107.2296;InbreedingCoeff=0.8335;MQ=54.75;MQ0=29;MQRankSum=-11.346;QD=15.60;ReadPosRankSum=-2.177;VQSLOD=3.2722;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:35:25.29:0,25,582	1/1:4,2:6:11.95:97,12,0	0/0:53,0:11:9.79:0,10,69	0/0:37,0:9:0.15:0,0,51	1/1:21,3:24:60.91:395,61,0	1/1:20,0:18:17.75:117,18,0	1/1:14,0:14:38.38:253,38,0	1/1:25,5:30:79.30:618,79,0	1/1:12,6:18:44.77:361,45,0	1/1:20,7:27:77.67:627,78,0	1/1:11,7:18:26.82:224,27,0	0/0:18,0:17:25.42:0,25,262	0/0:17,5:22:45.77:0,46,432	0/1:17,1:18:41.68:42,0,178	1/1:12,0:10:29.86:236,30,0	1/1:12,0:12:14.92:112,15,0	1/1:14,9:23:56.69:436,57,0	1/1:25,1:25:17.97:157,18,0	0/0:23,0:20:27.09:0,27,200	0/0:36,0:35:30.75:0,31,205	0/0:22,0:20:39.38:0,39,159	0/0:13,0:13:16.62:0,17,228	0/0:23,0:23:27.58:0,28,384	0/0:12,0:12:0.06:0,0,180	0/0:23,0:22:18.81:0,19,328	1/1:20,3:21:53.32:398,53,0	1/1:25,8:32:80.65:660,81,0	1/1:4,4:6:15.01:136,15,0
chr10	15157308	.	AAAAC	A	3715.98	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=8.410;DP=628;FS=0.369;HRun=0;HaplotypeScore=139.6465;InbreedingCoeff=0.7612;MQ=58.50;MQ0=23;MQRankSum=-8.650;QD=16.16;ReadPosRankSum=0.272;VQSLOD=3.1884;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:37:85.33:0,85,1805	1/1:4,1:5:11.96:110,12,0	0/0:50,0:13:35.67:0,36,383	0/0:35,0:9:14.75:0,15,148	0/1:22,0:22:96.04:96,0,123	0/1:21,0:19:10.94:11,0,34	0/1:13,0:13:11.93:12,0,103	1/1:26,3:29:78.49:644,78,0	1/1:15,5:20:21.39:353,21,0	1/1:23,3:26:59.70:589,60,0	1/1:12,4:16:8.90:257,9,0	0/0:18,0:17:44.92:0,45,960	0/0:24,0:24:54.08:0,54,1209	0/0:18,0:18:48.93:0,49,883	0/0:14,0:12:25.62:0,26,344	0/0:14,0:14:18.49:0,18,206	1/1:21,2:23:49.65:515,50,0	0/0:25,0:24:26.95:0,27,270	0/0:24,0:22:54:0,54,1168	0/0:39,0:38:99:0,114,2566	0/0:22,0:20:57.20:0,57,1456	0/0:14,0:14:40.51:0,41,742	0/0:23,0:23:65.60:0,66,1407	0/0:14,0:14:36:0,36,704	0/0:26,0:25:74.95:0,75,1422	1/1:16,1:16:19.05:296,19,0	1/1:24,4:27:37.16:609,37,0	1/1:7,3:9:21.92:225,22,0
chr10	15157309	.	AAAC	A	3712.67	PASS	AB=0.913;AC=19;AF=0.339;AN=56;BaseQRankSum=6.927;DP=617;FS=0.768;HRun=0;HaplotypeScore=129.4679;InbreedingCoeff=0.8838;MQ=59.35;MQ0=19;MQRankSum=-9.538;QD=19.24;ReadPosRankSum=-1.018;VQSLOD=3.1200;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:37:81.17:0,81,1561	1/1:4,1:5:11.96:110,12,0	0/0:45,0:13:32.30:0,32,298	0/0:34,0:9:6.21:0,6,124	0/1:19,2:21:16.68:17,0,130	0/0:21,0:19:7.62:0,8,46	0/0:13,0:13:21.94:0,22,170	1/1:32,0:32:86.56:749,87,0	1/1:19,0:19:33.17:364,33,0	1/1:23,1:24:63.23:575,63,0	1/1:16,0:16:22.55:265,23,0	0/0:18,0:18:44.61:0,45,819	0/0:23,0:23:54.07:0,54,1015	0/0:18,0:18:44.58:0,45,695	0/0:14,0:12:26.54:0,27,279	0/0:15,0:15:11.72:0,12,168	1/1:20,2:22:53.41:466,53,0	0/0:25,0:24:26.21:0,26,208	0/0:24,0:22:50.19:0,50,964	0/0:39,0:38:99:0,111,2181	0/0:21,0:20:57.18:0,57,1211	0/0:14,0:14:33.91:0,34,601	0/0:23,0:23:59.58:0,60,1154	0/0:13,0:13:33.01:0,33,561	0/0:26,0:25:69.02:0,69,1198	1/1:15,1:16:21.59:303,22,0	1/1:26,1:26:57.85:626,58,0	1/1:9,1:10:25.28:238,25,0
chr10	15157310	.	AAC	A	3586.05	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=6.031;DP=614;FS=2.162;HRun=0;HaplotypeScore=119.6860;InbreedingCoeff=0.9113;MQ=59.75;MQ0=17;MQRankSum=-9.994;QD=18.30;ReadPosRankSum=-2.020;VQSLOD=3.6009;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:75.17:0,75,1200	1/1:5,0:5:11.95:101,12,0	0/0:45,0:13:26.58:0,27,232	0/0:34,0:9:1.89:0,2,119	0/1:21,0:21:1.18:1,0,197	0/0:21,0:19:14.51:0,15,71	0/0:12,0:12:28.32:0,28,183	1/1:30,1:32:88.56:724,89,0	1/1:18,1:19:21.78:322,22,0	1/1:24,0:25:62.92:570,63,0	1/1:14,1:15:26.95:240,27,0	0/0:18,0:18:39.12:0,39,627	0/0:24,0:24:51.13:0,51,772	0/0:19,0:19:38.88:0,39,528	0/0:10,0:10:18.84:0,19,182	0/0:15,0:15:18.40:0,18,100	1/1:19,3:22:56.61:469,57,0	0/0:24,0:23:20.86:0,21,137	0/0:24,0:22:42.30:0,42,712	0/0:39,0:38:99:0,108,1679	0/0:21,0:20:57.18:0,57,942	0/0:14,0:14:30.07:0,30,457	0/0:23,0:23:51.15:0,51,853	0/0:13,0:13:30.01:0,30,416	0/0:26,0:25:60.15:0,60,911	1/1:17,0:16:22.74:282,23,0	1/1:28,2:29:74.43:649,74,0	1/1:10,0:10:26.06:228,26,0
chr10	15157311	.	ACAC	A	1097.74	PASS	AB=0.974;AC=14;AF=0.250;AN=56;BaseQRankSum=9.717;DP=594;FS=3.238;HRun=0;HaplotypeScore=134.8021;InbreedingCoeff=0.4790;MQ=60.84;MQ0=14;MQRankSum=-8.856;QD=5.18;ReadPosRankSum=-0.399;VQSLOD=2.5395;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:78.16:0,78,1659	1/1:5,0:5:9.23:45,9,0	0/0:44,0:12:27.99:0,28,387	0/1:33,0:9:5.01:5,0,84	0/0:21,1:22:23.92:0,24,517	0/0:19,0:17:17.17:0,17,133	0/0:12,0:12:34.27:0,34,387	0/1:33,0:33:20.40:184,0,20	0/1:19,0:19:13.97:132,0,14	1/1:24,2:26:17.21:257,17,0	1/1:15,0:15:20.39:155,20,0	0/0:16,0:16:39.12:0,39,847	0/0:21,0:21:51.17:0,51,1045	0/0:16,0:16:42.10:0,42,806	0/0:10,0:10:26.26:0,26,431	0/0:15,0:15:20.84:0,21,295	0/1:21,0:22:18.10:122,0,18	0/0:23,0:22:30.08:0,30,409	0/0:21,0:21:42.33:0,42,1030	0/0:38,0:37:99:0,108,2335	0/0:21,0:20:57.20:0,57,1270	0/0:11,0:11:30.10:0,30,639	0/0:21,0:21:53.32:0,53,1137	0/0:14,0:14:33.09:0,33,638	0/0:23,0:23:59.44:0,59,1259	0/1:14,2:15:50.08:126,0,50	1/1:33,0:32:9.57:195,10,0	0/1:10,0:10:0.47:49,0,0
chr10	15158186	.	ATTG	A	1104.02	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=5.507;DP=346;FS=0.000;HRun=0;HaplotypeScore=52.8916;InbreedingCoeff=0.9676;MQ=91.04;MQ0=0;MQRankSum=-4.849;QD=40.89;ReadPosRankSum=0.014;VQSLOD=3.8250;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:75.26:0,75,1728	0/0:6,0:6:18.06:0,18,415	0/0:16,0:16:17.29:0,17,928	0/0:19,0:19:54.19:0,54,1201	0/0:17,0:17:48.15:0,48,1062	0/0:10,0:10:30.10:0,30,691	0/0:13,0:13:33.11:0,33,761	0/0:15,0:15:45.15:0,45,1021	0/0:18,0:18:48.16:0,48,1106	0/0:15,0:15:45.15:0,45,1007	0/0:9,0:9:27.09:0,27,617	0/0:10,0:10:30.10:0,30,625	0/0:12,0:12:33.10:0,33,716	0/0:9,0:9:27.09:0,27,622	1/1:0,10:10:30.10:510,30,0	1/1:0,9:9:24.05:378,24,0	0/0:18,0:18:51.18:0,51,1175	1/1:0,8:8:21.07:358,21,0	0/0:8,0:8:24.08:0,24,513	0/0:11,0:11:33.11:0,33,723	0/0:17,0:17:51.16:0,51,1131	0/0:14,0:14:39.13:0,39,894	0/0:11,0:11:33.11:0,33,761	0/0:8,0:8:24.08:0,24,552	0/0:10,0:10:27.09:0,27,622	0/0:15,0:15:45.15:0,45,1038	0/0:10,0:10:27.09:0,27,622	0/0:3,0:3:9.03:0,9,208
chr10	15158333	.	A	AT	245.47	PASS	AB=0.731;AC=8;AF=0.148;AN=54;BaseQRankSum=1.073;DP=174;FS=4.446;HRun=11;HaplotypeScore=42.3617;InbreedingCoeff=0.2788;MQ=96.80;MQ0=0;MQRankSum=-2.633;QD=5.71;ReadPosRankSum=1.524;VQSLOD=0.7140;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:4:11.95:0,12,92	1/1:0,1:1:3.01:30,3,0	0/0:17,0:15:11.95:0,12,113	0/1:13,0:10:1.36:1,0,28	1/1:1,6:7:12.02:120,12,0	0/1:1,2:4:11.25:68,0,11	0/1:1,6:8:5.37:115,0,5	0/0:11,0:12:10.45:0,10,149	0/0:3,0:4:10.99:0,11,73	0/0:6,0:6:14.92:0,15,116	0/0:2,0:2:2.98:0,3,23	0/0:2,0:2:5.98:0,6,46	0/0:5,0:5:11.95:0,12,93	0/0:6,0:6:11.94:0,12,93	0/0:4,0:5:13.50:0,13,84	0/0:8,0:9:25.95:0,26,192	0/1:7,2:9:36.99:37,0,112	0/0:6,0:6:17.93:0,18,139	0/0:9,0:10:25.16:0,25,175	0/0:1,0:1:2.99:0,3,23	0/0:7,0:8:19.96:0,20,145	./.	0/0:7,0:8:22.96:0,23,168	0/0:5,0:5:8.62:0,9,68	0/0:3,0:3:5.97:0,6,46	0/0:8,0:8:20.90:0,21,162	0/0:6,0:6:14.94:0,15,116	0/0:3,0:3:5.96:0,6,46
chr10	15158739	.	G	GTCAC	13988.73	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-12.750;DP=663;FS=6.223;HRun=0;HaplotypeScore=94.4068;InbreedingCoeff=0.9934;MQ=62.35;MQ0=2;MQRankSum=0.218;QD=37.01;ReadPosRankSum=-1.326;VQSLOD=4.2275;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:90.11:0,90,1214	1/1:5,5:10:14.97:310,15,0	0/0:13,0:10:24.04:0,24,266	0/0:12,0:11:15.03:0,15,152	1/1:9,15:26:44.58:866,45,0	1/1:5,27:34:54.19:1317,54,0	1/1:1,12:15:33.11:805,33,0	1/1:50,0:49:95.82:1131,96,0	1/1:8,18:26:36.12:867,36,0	1/1:12,16:28:57.10:1128,57,0	1/1:2,11:14:26.92:545,27,0	0/0:26,0:26:57.18:0,57,906	0/0:33,0:33:72.13:0,72,1058	0/0:22,0:22:51.15:0,51,788	1/1:5,23:30:48.16:1170,48,0	1/1:9,23:32:48.16:1171,48,0	1/1:4,16:20:36.12:878,36,0	1/1:4,11:18:21.07:512,21,0	0/0:23,0:22:45.13:0,45,671	0/0:21,0:21:48.11:0,48,714	0/0:22,0:22:39.12:0,39,617	0/0:18,0:18:39.06:0,39,499	0/0:20,0:20:50.87:0,51,697	0/0:18,0:18:45.10:0,45,623	0/0:24,0:24:63.18:0,63,962	1/1:9,23:32:78.20:1698,78,0	1/1:9,26:34:48.04:1152,48,0	1/1:0,8:8:18.06:439,18,0
chr10	15159712	.	A	AAAAG	5094.87	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-10.876;DP=707;FS=18.599;HRun=0;HaplotypeScore=110.5034;InbreedingCoeff=0.9993;MQ=82.98;MQ0=0;MQRankSum=-4.979;QD=74.92;ReadPosRankSum=2.010;VQSLOD=5.4411;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,138,2795	0/0:16,0:16:45.15:0,45,943	0/0:19,0:19:54.17:0,54,1008	0/0:28,0:29:84.28:0,84,1610	0/0:33,0:33:93.31:0,93,1911	0/0:15,0:15:45.15:0,45,927	0/0:23,0:23:66.21:0,66,1345	0/0:38,0:38:99:0,114,2238	0/0:24,0:24:72.21:0,72,1403	0/0:35,0:35:99:0,102,2127	0/0:21,0:21:63.20:0,63,1282	0/0:19,0:19:54.18:0,54,1132	0/0:26,0:26:78.25:0,78,1581	0/0:28,0:28:84.25:0,84,1683	1/1:1,24:26:69.11:1991,69,0	1/1:0,28:29:81.28:2328,81,0	0/0:24,0:24:72.25:0,72,1490	1/1:1,10:13:27.09:776,27,0	0/0:20,0:20:57.18:0,57,1113	0/0:25,0:25:72.23:0,72,1456	0/0:29,0:29:87.30:0,87,1802	0/0:26,0:26:72.25:0,72,1510	0/0:22,0:22:60.19:0,60,1220	0/0:22,0:22:66.18:0,66,1322	0/0:19,0:19:57.20:0,57,1194	0/0:43,0:43:99:0,126,2595	0/0:25,0:25:69.20:0,69,1368	0/0:9,0:9:27.09:0,27,566
chr10	15162045	.	TTCTTTC	T	1170.96	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=-5.082;DP=370;FS=2.181;HRun=0;HaplotypeScore=94.8817;InbreedingCoeff=0.2843;MQ=61.01;MQ0=3;MQRankSum=-2.797;QD=9.76;ReadPosRankSum=-3.904;VQSLOD=1.0136;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:64.87:0,65,1069	0/0:7,0:7:5.36:0,5,104	0/0:22,0:10:21.93:0,22,270	0/0:21,0:8:21.06:0,21,405	1/1:3,11:14:29.95:513,30,0	1/1:4,8:12:15.05:284,15,0	1/1:0,11:11:15.05:365,15,0	0/1:16,0:14:3.26:3,0,287	0/0:11,0:11:12.28:0,12,137	0/1:10,0:10:37.46:37,0,75	0/1:15,0:15:0.06:0,0,265	0/0:14,0:14:18.60:0,19,462	0/0:7,0:7:16.77:0,17,340	0/0:11,0:9:22.89:0,23,470	0/1:9,0:9:8.88:9,0,178	0/1:5,0:4:33.39:33,0,56	0/0:33,0:33:22.48:0,22,596	0/1:13,0:12:79.13:79,0,141	0/1:15,0:15:1.84:2,0,309	0/0:12,0:12:30.91:0,31,394	0/0:5,0:5:4.20:0,4,77	0/0:9,0:9:12.63:0,13,238	0/0:8,0:7:3.12:0,3,83	0/0:17,0:17:26.69:0,27,574	0/0:9,0:9:10.13:0,10,226	0/0:15,0:15:24.62:0,25,354	0/0:20,0:20:35.12:0,35,416	0/0:2,0:2:3.01:0,3,41
chr10	15162046	.	TCTTTC	T	1211.34	PASS	AB=0.971;AC=14;AF=0.250;AN=56;BaseQRankSum=-4.310;DP=368;FS=8.330;HRun=0;HaplotypeScore=87.5414;InbreedingCoeff=0.1489;MQ=59.46;MQ0=3;MQRankSum=-1.868;QD=7.97;ReadPosRankSum=-5.063;VQSLOD=-0.6628;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:63.74:0,64,823	0/0:8,0:8:4.98:0,5,63	0/0:22,0:9:20.89:0,21,238	0/0:21,0:8:21.06:0,21,374	1/1:12,2:14:29.95:460,30,0	1/1:9,3:12:15.05:313,15,0	1/1:11,0:11:15.05:276,15,0	0/1:17,0:15:62.93:63,0,208	0/0:11,0:12:8.99:0,9,89	0/1:10,0:10:39.66:64,0,40	0/1:14,0:14:25.35:25,0,150	0/0:14,0:14:18.23:0,18,357	0/0:7,0:7:15.98:0,16,263	0/0:11,0:9:22.74:0,23,368	0/1:8,0:8:8.92:9,0,121	0/1:4,0:4:27.70:35,0,28	0/1:33,0:33:6.40:6,0,342	0/1:13,0:12:81.41:111,0,81	0/1:14,0:15:13.36:13,0,218	0/0:12,0:12:14.67:0,15,262	0/0:5,0:5:4.14:0,4,60	0/0:8,0:8:12.49:0,12,195	0/0:7,0:6:1.30:0,1,47	0/0:16,0:16:25.70:0,26,456	0/0:9,0:9:5.51:0,6,172	0/0:15,0:15:18.62:0,19,226	0/0:20,0:20:21.19:0,21,276	0/0:2,0:2:3:0,3,26
chr10	15162049	.	TTC	T	3585.48	PASS	AB=0.991;AC=40;AF=0.714;AN=56;BaseQRankSum=-3.963;DP=378;FS=3.433;HRun=0;HaplotypeScore=63.1652;InbreedingCoeff=0.0883;MQ=56.19;MQ0=6;MQRankSum=0.809;QD=10.90;ReadPosRankSum=-3.454;VQSLOD=2.3218;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:29,1:29:35.23:241,0,35	1/1:7,1:8:14.69:115,15,0	0/0:23,0:9:10.77:0,11,132	0/0:19,0:6:11.03:0,11,159	1/1:16,0:15:23.73:161,24,0	1/1:12,0:12:14.81:98,15,0	1/1:11,0:11:14.84:101,15,0	0/1:16,1:14:1.57:152,0,2	1/1:10,1:11:11.36:94,11,0	1/1:11,0:11:26.73:200,27,0	1/1:12,2:14:28.96:187,29,0	0/1:13,0:13:28.57:89,0,29	0/1:7,0:7:33.10:33,0,46	0/1:12,0:9:42.08:86,0,42	0/0:7,0:7:14.28:0,14,76	0/1:7,0:6:1.31:36,0,1	1/1:26,6:32:40.78:463,41,0	0/1:13,0:12:21.16:70,0,21	1/1:14,0:14:7.55:253,8,0	1/1:11,0:11:17.04:140,17,0	1/1:6,0:6:8.83:58,9,0	0/1:8,0:8:23.94:38,0,24	1/1:8,0:6:1.09:111,1,0	0/1:17,0:17:24.66:25,0,88	0/1:7,0:7:10.33:85,0,10	1/1:19,3:21:45.49:468,45,0	1/1:19,1:17:37.08:265,37,0	1/1:2,0:2:2.90:16,3,0
chr10	15162050	.	TC	T	5212.73	PASS	AB=0.944;AC=49;AF=0.875;AN=56;BaseQRankSum=-4.303;DP=377;FS=5.839;HRun=1;HaplotypeScore=53.0787;InbreedingCoeff=0.5637;MQ=56.01;MQ0=7;MQRankSum=2.323;QD=15.89;ReadPosRankSum=0.057;VQSLOD=4.5118;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:28,2:29:59.49:449,59,0	1/1:1,7:8:14.96:148,15,0	0/0:23,0:9:9.83:0,10,123	0/0:19,0:6:10.90:0,11,123	1/1:16,0:15:22.70:120,23,0	1/1:12,0:12:14.30:77,14,0	1/1:12,0:11:14.08:71,14,0	1/1:10,7:14:25.88:291,26,0	1/1:1,10:11:11.79:127,12,0	1/1:0,11:11:26.90:225,27,0	1/1:2,12:14:30:342,30,0	1/1:12,1:13:25.21:204,25,0	1/1:7,0:7:8.47:79,8,0	1/1:12,0:9:9.11:125,9,0	0/0:7,0:7:0.05:0,0,1	1/1:7,0:6:10.14:64,10,0	1/1:10,21:31:54.79:626,55,0	1/1:13,0:12:17.60:106,18,0	1/1:11,3:14:39.68:354,40,0	1/1:5,6:11:28.88:330,29,0	1/1:5,1:6:9.85:85,10,0	1/1:6,0:6:6.73:57,7,0	1/1:7,1:6:13.03:141,13,0	0/1:16,1:17:17:110,0,17	1/1:7,0:7:16.67:118,17,0	1/1:21,2:21:59.36:510,59,0	1/1:16,4:17:42.01:416,42,0	1/1:0,2:2:3.01:41,3,0
chr10	15162700	.	GT	G	4996.94	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=10.044;DP=672;FS=3.842;HRun=8;HaplotypeScore=72.1172;InbreedingCoeff=0.9943;MQ=87.61;MQ0=0;MQRankSum=-6.278;QD=25.89;ReadPosRankSum=1.306;VQSLOD=5.7399;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,123,1438	1/1:0,4:4:12.02:116,12,0	0/0:26,0:26:60.08:0,60,628	0/0:23,0:23:50.98:0,51,532	0/0:21,0:21:60.17:0,60,715	0/0:11,0:11:33.10:0,33,397	0/0:31,0:31:87.27:0,87,1049	1/1:4,27:31:78.10:748,78,0	1/1:1,30:31:87.14:840,87,0	1/1:2,21:23:63.10:608,63,0	1/1:3,15:18:45.07:434,45,0	0/0:32,0:32:87.26:0,87,1037	0/0:29,0:29:81.23:0,81,951	0/0:34,0:34:96.26:0,96,1135	0/0:21,0:21:60.18:0,60,725	0/0:27,1:28:55.27:0,55,940	1/1:4,26:30:75.11:724,75,0	0/0:28,0:28:78.24:0,78,942	0/0:22,0:22:63.18:0,63,736	0/0:24,0:24:57.15:0,57,667	0/0:28,0:28:72.20:0,72,849	0/0:14,0:14:30.08:0,30,353	0/0:25,0:25:72.21:0,72,855	0/0:23,0:23:57.17:0,57,678	0/0:12,0:12:30.08:0,30,352	1/1:2,26:28:78.09:745,78,0	1/1:1,20:21:60.10:579,60,0	1/1:0,7:7:21.03:203,21,0
chr10	15163093	.	G	GA	1616.05	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-9.266;DP=626;FS=1.117;HRun=9;HaplotypeScore=58.8287;InbreedingCoeff=0.9729;MQ=59.65;MQ0=18;MQRankSum=0.232;QD=21.84;ReadPosRankSum=0.697;VQSLOD=4.3931;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,111,959	0/0:16,0:16:41.99:0,42,365	0/0:12,0:6:11.96:0,12,103	0/0:12,0:5:10.36:0,10,64	0/0:39,1:39:62.79:0,63,774	0/0:19,0:19:47.99:0,48,417	0/0:15,0:14:38.99:0,39,339	0/0:29,0:27:68.95:0,69,597	0/0:14,0:14:26.99:0,27,234	0/0:26,0:26:59.97:0,60,521	0/0:21,0:20:47.96:0,48,413	0/0:14,0:14:32.98:0,33,286	0/0:15,0:16:41.02:0,41,345	0/0:17,0:17:32.01:0,32,266	1/1:0,19:19:48.13:531,48,0	1/1:5,27:31:60.16:664,60,0	0/0:39,0:38:89.95:0,90,778	1/1:6,17:21:51.11:564,51,0	0/0:13,0:13:35.98:0,36,310	0/0:20,0:20:44.96:0,45,387	0/0:16,0:16:44.99:0,45,391	0/0:22,0:22:38.94:0,39,331	0/0:29,0:28:59.98:0,60,520	0/0:29,0:29:83.98:0,84,729	0/0:27,0:25:62.02:0,62,527	0/0:22,0:22:59.98:0,60,521	0/0:26,0:26:68.97:0,69,595	0/0:14,0:14:32.94:0,33,277
chr10	15164402	.	C	CA	891.80	PASS	AB=0.833;AC=17;AF=0.304;AN=56;BaseQRankSum=-2.500;DP=526;FS=6.721;HRun=14;HaplotypeScore=77.1073;InbreedingCoeff=0.4384;MQ=54.15;MQ0=13;MQRankSum=0.884;QD=4.27;ReadPosRankSum=-1.724;VQSLOD=1.1078;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:28:0.22:0,0,176	0/1:7,4:11:6.38:68,0,6	0/0:13,0:6:10.59:0,11,51	0/0:14,0:7:0.03:0,0,9	0/0:9,0:21:24.27:0,24,70	0/0:12,0:22:22.13:0,22,85	0/0:5,0:9:13.11:0,13,49	1/1:23,7:31:17.83:145,18,0	1/1:7,6:13:6:53,6,0	0/1:16,8:24:9.33:149,0,9	1/1:8,8:14:5.90:67,6,0	0/0:23,0:23:2.62:0,3,132	0/0:19,0:18:6.76:0,7,40	0/0:17,0:17:8.28:0,8,56	0/1:22,0:23:1.67:2,0,102	0/0:21,0:21:37.25:0,37,230	0/1:9,7:13:4.74:68,0,5	0/0:13,0:11:14.68:0,15,92	0/0:15,0:21:17.99:0,18,53	0/0:16,0:17:10.83:0,11,37	0/0:5,0:10:6.09:0,6,18	0/0:23,1:24:30.27:0,30,189	0/1:19,0:20:13.16:13,0,75	0/0:11,0:12:19.12:0,19,111	0/0:21,0:24:16.48:0,16,104	1/1:11,9:21:8.32:178,8,0	1/1:20,8:28:9.83:275,10,0	1/1:3,1:5:5.84:41,6,0
chr10	15165832	.	AACACACACACACACAC	A	2507.24	PASS	AB=0.864;AC=28;AF=0.667;AN=42;BaseQRankSum=1.471;DP=452;FS=5.803;HRun=0;HaplotypeScore=186.5146;InbreedingCoeff=0.3203;MQ=47.21;MQ0=21;MQRankSum=-2.536;QD=10.58;ReadPosRankSum=2.227;VQSLOD=2.0052;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:9:3.01:0,3,48	./.	./.	./.	1/1:15,2:19:5.98:132,6,0	1/1:12,0:16:2.60:10,3,0	./.	0/1:28,0:28:8.87:11,0,9	1/1:23,0:22:18.06:652,18,0	1/1:18,0:18:9.03:263,9,0	1/1:13,0:13:3.01:112,3,0	0/0:14,0:13:3.01:0,3,156	1/1:16,0:16:3.01:129,3,0	1/1:11,5:18:6.02:229,6,0	0/0:13,0:13:8.76:0,9,93	0/1:10,0:15:38.02:57,0,38	1/1:13,0:13:3.01:48,3,0	0/0:14,0:14:1.72:0,2,4	1/1:10,0:10:3.01:112,3,0	1/1:4,2:7:9.03:372,9,0	0/0:23,0:23:6.02:0,6,313	1/1:9,1:9:3:124,3,0	1/1:16,0:14:2.61:128,3,0	./.	./.	./.	1/1:13,0:13:9.03:261,9,0	0/0:7,0:7:2.82:0,3,197
chr10	15165867	.	ACACACACACACACACACACACACT	A	4098.11	PASS	AB=1.000;AC=25;AF=0.500;AN=50;BaseQRankSum=-1.147;DP=535;FS=7.494;HRun=0;HaplotypeScore=258.8705;InbreedingCoeff=-0.0316;MQ=43.32;MQ0=70;MQRankSum=0.405;QD=11.08;ReadPosRankSum=-0.484;VQSLOD=1.4537;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:15,0:10:9.76:10,0,243	1/1:6,0:5:8.75:55,9,0	./.	./.	0/1:23,0:22:71.13:71,0,91	0/1:14,0:14:55.41:55,0,62	./.	0/1:20,0:18:35.43:135,0,35	1/1:8,24:28:18.53:1156,19,0	1/1:10,17:25:40.06:718,40,0	1/1:5,20:23:8.94:237,9,0	0/0:19,0:15:8.98:0,9,935	0/1:21,0:19:4.37:4,0,76	0/1:24,0:22:87.16:87,0,168	0/0:18,0:15:27.07:0,27,1076	0/0:24,0:23:6.60:0,7,633	0/1:15,0:14:1.60:170,0,2	0/0:15,0:10:29.26:0,29,750	0/1:9,0:7:32.95:156,0,33	0/1:21,0:21:99:195,0,424	0/0:34,0:25:9.69:0,10,512	0/1:29,0:26:13.15:13,0,43	0/0:30,0:28:3.99:0,4,258	0/1:21,0:15:5.69:6,0,309	0/1:18,0:16:38.88:39,0,485	1/1:22,0:18:38.26:295,38,0	1/1:18,0:17:23.88:565,24,0	0/1:10,0:8:99:131,0,276
chr10	15165875	.	ACACACACACACACACT	A	4692.66	PASS	AB=0.924;AC=33;AF=0.660;AN=50;BaseQRankSum=-3.907;DP=549;FS=5.550;HRun=0;HaplotypeScore=218.1546;InbreedingCoeff=-0.0372;MQ=44.39;MQ0=70;MQRankSum=2.624;QD=10.45;ReadPosRankSum=0.657;VQSLOD=3.1927;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:17,0:12:25.20:75,0,25	1/1:5,0:4:8.75:55,9,0	./.	./.	0/1:26,0:25:18.16:91,0,18	0/0:15,0:15:2.05:0,2,17	./.	1/1:23,0:20:11.73:224,12,0	1/1:29,0:25:18.06:705,18,0	1/1:23,0:21:39.59:474,40,0	1/1:24,0:22:8.94:162,9,0	0/1:22,0:18:99:240,0,103	0/1:5,16:19:3.09:131,0,3	1/1:24,0:22:25.31:361,25,0	0/0:19,0:16:26.93:0,27,389	0/1:26,0:25:69.23:69,0,317	0/1:12,0:11:7.55:80,0,8	0/1:13,0:8:24.12:24,0,103	0/1:14,0:11:73.20:73,0,94	0/1:23,0:23:99:270,0,244	0/0:36,0:27:18.15:0,18,366	1/1:10,19:26:3:142,3,0	0/1:8,16:22:17.96:139,0,18	1/1:23,0:17:24.43:189,24,0	1/1:20,0:18:38.24:315,38,0	1/1:22,0:18:44.38:340,44,0	1/1:20,0:19:16.93:429,17,0	0/1:9,0:7:99:104,0,178
chr10	15165951	.	AGACATTTGGCTTTT	A	5636.45	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.633;DP=639;FS=1.938;HRun=0;HaplotypeScore=270.9470;InbreedingCoeff=0.9979;MQ=77.03;MQ0=0;MQRankSum=-10.680;QD=104.38;ReadPosRankSum=1.136;VQSLOD=4.1143;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:66.23:0,66,4593	0/0:10,0:10:30.10:0,30,2034	0/0:21,0:21:63.21:0,63,3432	0/0:21,0:21:59.77:0,60,3707	1/1:5,24:29:69.12:2912,69,0	1/1:3,14:17:42.14:1816,42,0	1/1:1,7:8:21.07:908,21,0	0/0:39,0:39:99:0,117,7267	0/0:20,0:20:30.57:0,31,2123	0/0:25,0:25:75.26:0,75,4917	0/0:22,0:22:60.21:0,60,3675	0/0:20,0:20:60.19:0,60,3936	0/0:22,0:22:48.16:0,48,3418	0/0:19,0:19:54.19:0,54,3362	0/0:25,0:25:75.26:0,75,5045	0/0:27,0:27:81.28:0,81,5417	0/0:30,0:30:87.30:0,87,6003	0/0:10,0:10:30.10:0,30,1965	0/0:13,0:13:36.12:0,36,2246	0/0:46,0:46:99:0,138,8981	0/0:15,0:15:42.14:0,42,2970	0/0:22,0:22:60.21:0,60,3952	0/0:23,0:23:48.64:0,49,3268	0/0:30,0:30:90.31:0,90,6003	0/0:20,0:20:57.20:0,57,3731	0/0:32,0:32:96.33:0,96,6145	0/0:38,0:38:99:0,114,7816	0/0:13,0:13:39.13:0,39,2560
chr10	15166009	.	CA	C	2935.33	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=11.037;DP=706;FS=4.074;HRun=2;HaplotypeScore=85.0988;InbreedingCoeff=0.8465;MQ=73.48;MQ0=0;MQRankSum=-4.120;QD=29.06;ReadPosRankSum=1.681;VQSLOD=3.3381;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:96.32:0,96,1430	0/0:14,0:14:42.14:0,42,629	0/0:20,0:20:55.84:0,56,795	0/1:15,0:15:11.33:11,0,434	1/1:1,38:39:99:1439,111,0	1/1:1,26:27:69.22:894,69,0	1/1:0,20:20:57.19:739,57,0	0/0:23,0:23:69.22:0,69,1011	0/0:18,0:18:54.18:0,54,809	0/0:38,0:38:99:0,114,1656	0/0:20,0:20:57.18:0,57,829	0/0:29,0:28:84.28:0,84,1241	0/0:28,0:28:81.27:0,81,1209	0/0:18,0:18:54.18:0,54,807	0/0:32,0:32:96.33:0,96,1439	0/0:33,0:33:96.31:0,96,1415	0/0:33,0:33:96.28:0,96,1396	0/0:13,0:13:33.11:0,33,493	0/0:21,0:21:63.21:0,63,943	0/0:31,0:31:93.31:0,93,1375	0/0:28,0:28:84.28:0,84,1258	0/0:23,0:23:66.21:0,66,966	0/0:26,0:26:78.26:0,78,1169	0/0:27,0:27:75.24:0,75,1105	0/0:17,0:17:51.17:0,51,763	0/0:34,0:34:99:0,102,1497	0/0:33,0:33:99:0,99,1483	0/0:14,0:14:42.14:0,42,629
chr10	15166583	.	A	AT	1764.69	PASS	AB=0.932;AC=14;AF=0.250;AN=56;BaseQRankSum=-5.114;DP=573;FS=23.770;HRun=0;HaplotypeScore=70.2428;InbreedingCoeff=0.4757;MQ=49.74;MQ0=17;MQRankSum=5.622;QD=8.32;ReadPosRankSum=1.984;VQSLOD=1.8110;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:37:89.86:0,90,541	1/1:14,0:14:31.93:238,32,0	0/0:29,0:9:23.82:0,24,179	0/1:30,0:9:1.92:2,0,20	0/0:27,0:25:46.20:0,46,317	0/0:24,0:24:57.70:0,58,386	0/0:13,0:13:35.72:0,36,271	0/1:39,0:39:52.38:428,0,52	1/1:10,0:10:6.83:134,7,0	0/1:23,0:22:39.35:266,0,39	0/1:7,16:23:0.91:178,0,1	0/0:17,0:16:29.30:0,29,229	0/0:16,0:13:31.71:0,32,221	0/0:11,0:11:26.47:0,26,185	0/0:23,0:24:59.70:0,60,401	0/0:19,0:19:35.35:0,35,312	0/1:15,0:13:24.68:99,0,25	0/0:23,0:22:55.35:0,55,388	0/0:16,0:14:38.39:0,38,304	0/0:25,0:25:65.16:0,65,475	0/0:13,0:11:32.48:0,32,232	0/0:18,0:17:40.01:0,40,256	0/0:17,0:17:44.90:0,45,306	0/0:11,0:11:8.50:0,8,24	0/0:20,0:20:51.19:0,51,364	0/1:30,0:28:44.57:259,0,45	1/1:19,0:17:19.94:233,20,0	1/1:8,1:7:14.65:100,15,0
chr10	15167266	.	C	CT	12137.75	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-14.250;DP=720;FS=2.558;HRun=9;HaplotypeScore=65.0698;InbreedingCoeff=0.9992;MQ=75.18;MQ0=0;MQRankSum=-3.111;QD=26.05;ReadPosRankSum=0.421;VQSLOD=5.3652;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:68.95:0,69,595	1/1:1,12:13:36.10:398,36,0	0/0:14,0:14:35.37:0,35,286	0/0:18,0:18:22.58:0,23,224	1/1:3,31:34:89.95:922,90,0	1/1:3,18:21:45.12:498,45,0	1/1:8,16:24:45.12:498,45,0	1/1:8,33:41:73.20:1027,73,0	1/1:3,20:23:56.82:608,57,0	1/1:6,27:34:81.18:875,81,0	1/1:4,22:26:40.01:641,40,0	0/0:22,0:22:56.94:0,57,488	0/0:29,0:29:83.97:0,84,725	0/0:32,0:32:89.96:0,90,778	1/1:6,21:27:57.15:628,57,0	1/1:2,29:31:84.23:926,84,0	1/1:2,20:22:51.14:564,51,0	1/1:3,19:22:51.14:564,51,0	1/1:5,22:27:66.14:705,66,0	1/1:0,27:27:75.20:827,75,0	1/1:4,21:25:54.15:597,54,0	0/0:17,0:17:38.98:0,39,339	0/0:35,0:35:95.98:0,96,833	0/0:23,0:23:62.95:0,63,539	0/0:36,0:36:99:0,105,906	1/1:2,23:25:69.19:763,69,0	1/1:1,29:30:75.20:830,75,0	1/1:1,13:14:24.06:265,24,0
chr10	15167541	.	T	TG	2888.26	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-1.182;DP=670;FS=7.031;HRun=1;HaplotypeScore=140.7080;InbreedingCoeff=0.9976;MQ=79.14;MQ0=0;MQRankSum=-4.938;QD=36.56;ReadPosRankSum=1.459;VQSLOD=2.7489;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:78.25:0,78,1012	0/0:10,0:10:30.08:0,30,373	0/0:28,0:26:75.05:0,75,889	0/0:32,0:32:87.14:0,87,1081	0/0:25,0:25:63.12:0,63,818	0/0:18,0:18:51.17:0,51,661	0/0:21,0:21:48.14:0,48,608	0/0:30,0:30:84.27:0,84,1090	0/0:28,0:28:84.23:0,84,1046	0/0:24,0:24:69.22:0,69,896	0/0:17,0:17:45.14:0,45,570	0/0:26,0:26:75.24:0,75,973	0/0:27,0:27:72.23:0,72,934	0/0:26,0:26:72.22:0,72,920	1/1:4,34:37:99:1480,99,0	1/1:3,27:30:81.26:1191,81,0	0/0:32,0:32:87.25:0,87,1094	1/1:2,9:11:24.08:360,24,0	0/0:17,0:17:51.17:0,51,662	0/0:20,0:20:57.14:0,57,721	0/0:36,0:36:87.15:0,87,1114	0/0:17,0:17:45.13:0,45,570	0/0:17,0:17:39.11:0,39,492	0/0:32,0:32:80.80:0,81,1035	0/0:20,0:20:57.18:0,57,739	0/0:21,0:21:57.19:0,57,740	0/0:32,0:32:96.27:0,96,1228	0/0:7,0:7:21.07:0,21,273
chr10	15167783	.	CT	C	5652.04	PASS	AB=0.909;AC=38;AF=0.679;AN=56;BaseQRankSum=7.001;DP=626;FS=3.784;HRun=12;HaplotypeScore=75.6194;InbreedingCoeff=0.7800;MQ=69.12;MQ0=4;MQRankSum=-1.295;QD=12.76;ReadPosRankSum=1.476;VQSLOD=5.1504;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,1:35:62.80:0,63,762	1/1:0,7:8:13.98:99,14,0	0/0:28,0:12:4.84:0,5,127	0/1:14,1:10:8.21:8,0,44	1/1:4,22:28:60.61:439,61,0	1/1:3,21:25:58.81:447,59,0	1/1:5,19:26:21.45:330,21,0	1/1:8,22:32:65.64:500,66,0	1/1:6,18:25:40.84:308,41,0	1/1:3,23:28:66.17:484,66,0	1/1:8,5:17:28.87:210,29,0	0/0:12,3:15:12.85:0,13,312	0/0:21,0:21:51.09:0,51,513	0/0:26,0:26:43.27:0,43,560	1/1:7,16:23:20.34:339,20,0	1/1:2,20:24:30.41:399,30,0	1/1:2,22:25:61.80:470,62,0	1/1:5,17:23:49.84:377,50,0	1/1:10,0:21:26.79:79,27,0	1/1:5,0:17:24.43:71,24,0	1/1:1,1:20:35.58:117,36,0	0/0:25,1:26:33.80:0,34,494	0/1:19,3:22:21.96:22,0,332	0/0:16,1:17:15.74:0,16,335	0/0:12,2:14:12.82:0,13,300	1/1:1,30:33:92.61:676,93,0	1/1:3,18:23:10.91:255,11,0	1/1:2,2:4:2.99:23,3,0
chr10	15168549	.	TA	T	3206.79	PASS	AB=0.741;AC=36;AF=0.643;AN=56;BaseQRankSum=10.066;DP=601;FS=14.574;HRun=16;HaplotypeScore=88.0512;InbreedingCoeff=0.6637;MQ=65.66;MQ0=26;MQRankSum=-1.533;QD=9.57;ReadPosRankSum=3.494;VQSLOD=1.5746;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:34:79.99:0,80,681	1/1:1,7:8:20.45:123,20,0	0/0:71,4:22:9.53:0,10,68	0/0:76,3:25:12.59:0,13,81	1/1:7,21:29:54.45:321,54,0	1/1:2,19:21:41.05:247,41,0	1/1:0,12:12:29.42:179,29,0	1/1:14,14:27:37.10:231,37,0	1/1:3,10:13:23.27:143,23,0	1/1:4,16:20:43.66:264,44,0	1/1:3,7:10:20.19:122,20,0	0/1:9,2:11:12.11:12,0,116	0/0:10,1:12:8.62:0,9,150	0/0:9,0:9:14.96:0,15,121	1/1:5,11:16:26.19:160,26,0	1/1:5,8:13:17.63:107,18,0	1/1:9,15:24:46.58:285,47,0	1/1:5,13:18:38.92:234,39,0	0/1:7,12:19:26.74:138,0,27	0/1:9,11:21:38.97:109,0,39	1/1:3,10:14:26.45:162,26,0	0/1:6,1:7:6.04:6,0,61	0/0:10,1:11:5.81:0,6,145	0/0:22,0:21:30.91:0,31,353	0/0:18,0:18:34.93:0,35,299	1/1:7,9:16:32.13:196,32,0	1/1:8,14:22:34.92:212,35,0	1/1:1,11:11:26.48:161,26,0
chr10	15168653	.	AAAAAAAAAAAAAAAAAAGAAAGAAAG	A	6864.46	PASS	AB=0.824;AC=16;AF=0.308;AN=52;BaseQRankSum=4.375;DP=356;FS=8.555;HRun=0;HaplotypeScore=200.7249;InbreedingCoeff=0.8105;MQ=38.78;MQ0=41;MQRankSum=-4.477;QD=54.48;ReadPosRankSum=9.619;VQSLOD=1.1598;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:18:51.17:0,51,2547	0/1:2,0:2:0:0,0,0	./.	./.	0/0:15,0:14:35.33:0,35,966	0/0:17,0:15:39.04:0,39,1127	0/0:6,0:4:9.03:0,9,291	1/1:14,0:11:24.83:482,25,0	0/1:5,6:8:99:281,0,244	1/1:10,1:10:20.95:530,21,0	1/1:6,16:21:17.84:586,18,0	0/0:6,0:4:12.04:0,12,777	0/0:7,0:6:18.06:0,18,1146	0/0:7,0:5:15.05:0,15,928	0/0:13,0:13:33.10:0,33,936	0/0:9,0:8:24.07:0,24,1129	1/1:15,3:14:22.49:1372,22,0	0/0:28,0:24:57.16:0,57,2194	0/0:13,0:7:21.07:0,21,787	0/0:22,0:21:59.40:0,59,3281	0/0:11,0:9:21.07:0,21,464	0/0:6,0:5:9.03:0,9,201	0/0:12,0:12:32.85:0,33,1190	0/0:13,0:5:6.02:0,6,189	0/0:25,0:23:66.22:0,66,3236	1/1:11,0:10:23.92:1165,24,0	1/1:18,5:20:58.74:2224,59,0	1/1:8,6:7:6.02:225,6,0
chr10	15168809	.	AC	A	12571.99	PASS	AB=0.769;AC=55;AF=0.982;AN=56;BaseQRankSum=-1.732;DP=419;FS=0.000;HRun=2;HaplotypeScore=149.7747;InbreedingCoeff=-0.0238;MQ=37.06;MQ0=0;MQRankSum=-1.732;QD=30.00;ReadPosRankSum=0.680;VQSLOD=4.3222;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,22:24:45.15:583,45,0	1/1:0,4:4:12.04:156,12,0	1/1:2,5:7:18.05:221,18,0	0/1:7,3:9:20.83:247,0,21	1/1:2,20:22:30.04:387,30,0	1/1:0,15:15:36.12:467,36,0	1/1:3,18:21:51.17:661,51,0	1/1:0,16:16:48.14:608,48,0	1/1:1,7:8:21.06:258,21,0	1/1:0,20:20:57.19:740,57,0	1/1:2,12:14:21.07:272,21,0	1/1:0,13:13:39.13:505,39,0	1/1:0,10:9:24.08:311,24,0	1/1:0,21:20:54.18:700,54,0	1/1:3,22:25:57.19:739,57,0	1/1:1,11:11:33.11:428,33,0	1/1:0,13:12:33.11:428,33,0	1/1:0,14:14:42.14:545,42,0	1/1:0,14:14:42.14:545,42,0	1/1:0,16:16:21.07:272,21,0	1/1:1,9:10:11.68:155,12,0	1/1:0,14:14:18.06:233,18,0	1/1:1,8:9:8.94:117,9,0	1/1:0,21:21:45.08:583,45,0	1/1:0,21:21:63.20:817,63,0	1/1:2,23:25:69.22:895,69,0	1/1:0,14:14:36.12:467,36,0	1/1:0,6:6:18.06:234,18,0
chr10	15169630	.	AT	A	10532.96	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=11.310;DP=635;FS=1.395;HRun=7;HaplotypeScore=74.5045;InbreedingCoeff=0.9992;MQ=71.08;MQ0=0;MQRankSum=-3.600;QD=26.33;ReadPosRankSum=3.329;VQSLOD=5.6159;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:90.22:0,90,1086	1/1:0,14:14:42.10:428,42,0	0/0:24,0:21:46.59:0,47,468	0/0:18,0:17:46.66:0,47,528	1/1:1,33:34:99:996,99,0	1/1:1,21:22:63.14:643,63,0	1/1:2,16:18:45.10:459,45,0	1/1:2,26:28:78.12:770,78,0	1/1:1,21:22:51.12:520,51,0	1/1:1,27:28:81.16:815,81,0	1/1:2,22:24:63.14:643,63,0	0/0:22,0:22:66.20:0,66,817	0/0:20,0:20:60.19:0,60,754	0/0:14,0:14:38.97:0,39,453	1/1:1,29:30:78.18:796,78,0	1/1:3,23:26:63.14:643,63,0	1/1:3,23:26:66.08:660,66,0	1/1:4,12:16:36.08:367,36,0	1/1:6,12:18:47.80:396,48,0	1/1:4,20:24:65.98:579,66,0	1/1:3,10:13:26.99:236,27,0	0/0:22,0:22:66.20:0,66,819	0/0:36,0:36:99:0,108,1323	0/0:21,0:21:57.17:0,57,701	0/0:26,0:26:78.22:0,78,956	1/1:2,19:21:57.10:573,57,0	1/1:0,28:28:78.18:795,78,0	1/1:1,7:8:21.05:214,21,0
chr10	15169640	.	AAC	A	2005.25	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=6.995;DP=648;FS=6.331;HRun=0;HaplotypeScore=119.5852;InbreedingCoeff=0.9983;MQ=72.21;MQ0=0;MQRankSum=-1.450;QD=33.99;ReadPosRankSum=0.849;VQSLOD=5.9628;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:87.30:0,87,1649	0/0:15,0:15:45.15:0,45,632	0/0:21,0:19:46.33:0,46,706	0/0:17,0:17:44.54:0,45,717	0/0:38,0:38:99:0,111,1606	0/0:24,0:24:72.22:0,72,1022	0/0:19,0:19:54.15:0,54,745	0/0:26,0:26:75.25:0,75,1114	0/0:23,0:23:60.20:0,60,889	0/0:33,0:33:99:0,99,1562	0/0:23,0:23:69.23:0,69,1011	0/0:23,0:23:69.22:0,69,1284	0/0:23,0:23:66.20:0,66,1206	0/0:14,0:14:36.11:0,36,660	0/0:30,0:30:81.27:0,81,1172	0/0:23,0:23:66.22:0,66,956	0/0:25,0:25:72.21:0,72,1008	0/0:13,0:13:36.12:0,36,489	1/1:2,17:19:57.10:738,57,0	1/1:0,25:25:72.21:992,72,0	1/1:5,10:15:30.10:419,30,0	0/0:24,0:24:72.23:0,72,1346	0/0:36,0:36:99:0,102,1959	0/0:20,0:20:57.17:0,57,1054	0/0:29,0:29:87.25:0,87,1564	0/0:22,0:22:65.94:0,66,952	0/0:31,0:31:86.10:0,86,1232	0/0:7,0:7:21.07:0,21,294
chr10	15169641	.	AC	A	1168.71	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.642;DP=640;FS=7.354;HRun=1;HaplotypeScore=108.1621;InbreedingCoeff=0.9980;MQ=71.49;MQ0=0;MQRankSum=-0.755;QD=20.15;ReadPosRankSum=1.052;VQSLOD=3.4686;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:87.26:0,87,1313	0/0:15,0:15:43.90:0,44,303	0/0:19,1:18:45.05:0,45,598	0/0:15,0:15:44.34:0,44,627	0/0:38,0:38:99:0,108,791	0/0:24,0:24:70.67:0,71,502	0/0:20,0:20:55.09:0,55,411	0/0:26,0:26:72.36:0,72,609	0/0:22,0:22:58.39:0,58,441	0/0:33,0:33:96.09:0,96,916	0/0:23,0:23:67.76:0,68,485	0/0:23,0:23:69.20:0,69,1030	0/0:22,0:22:66.19:0,66,984	0/0:13,0:13:36.10:0,36,537	0/0:30,0:30:79.80:0,80,542	0/0:23,0:23:64.53:0,65,452	0/0:25,0:25:66.88:0,67,458	0/0:12,0:12:34.13:0,34,192	1/1:18,0:18:53.15:424,53,0	1/1:25,0:25:72:637,72,0	1/1:10,5:15:29.92:251,30,0	0/0:24,0:24:72.23:0,72,1097	0/0:34,0:34:99:0,102,1590	0/0:20,0:20:57.17:0,57,863	0/0:29,0:29:87.23:0,87,1266	0/0:22,0:22:64.77:0,65,530	0/0:32,0:32:52.56:0,53,572	0/0:7,0:7:20.40:0,20,121
chr10	15171614	.	GA	G	2585.30	PASS	AB=0.810;AC=13;AF=0.232;AN=56;BaseQRankSum=12.099;DP=679;FS=4.563;HRun=10;HaplotypeScore=69.3278;InbreedingCoeff=0.7210;MQ=60.87;MQ0=8;MQRankSum=-0.518;QD=14.20;ReadPosRankSum=1.953;VQSLOD=4.0552;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,129,1398	0/0:8,0:8:15.04:0,15,166	0/0:17,0:9:7.30:0,7,97	0/1:15,1:13:17.85:18,0,180	1/1:5,26:31:65.95:573,66,0	1/1:2,23:25:32.83:514,33,0	1/1:6,13:19:35.98:313,36,0	0/0:17,2:19:21.13:0,21,498	0/0:17,0:17:44.44:0,44,457	0/0:26,0:26:54.15:0,54,597	0/0:16,0:18:35.92:0,36,372	0/0:21,0:21:43.32:0,43,442	0/0:24,1:25:43.11:0,43,689	0/0:27,1:28:40.11:0,40,658	1/1:3,31:34:74.98:651,75,0	0/1:6,11:16:3.20:204,0,3	0/0:47,0:49:99:0,135,1446	1/1:5,20:25:53.96:469,54,0	0/0:16,0:13:33.09:0,33,364	0/0:21,1:22:31.09:0,31,562	0/0:25,0:25:60.16:0,60,663	0/0:22,2:24:60.16:0,60,660	0/0:17,2:19:28.09:0,28,538	0/0:22,0:21:54.15:0,54,597	0/0:23,1:25:39.95:0,40,643	0/0:39,2:41:44.20:0,44,926	0/0:24,1:25:31.09:0,31,563	0/1:13,2:14:28.18:28,0,157
chr10	15172298	.	A	AAAC	6970.41	PASS	AC=26;AF=0.500;AN=52;BaseQRankSum=-2.399;DP=707;FS=30.046;HRun=0;HaplotypeScore=117.2484;InbreedingCoeff=0.9438;MQ=63.21;MQ0=7;MQRankSum=-2.818;QD=18.20;ReadPosRankSum=0.490;VQSLOD=2.9561;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,19:28:11.96:875,12,0	1/1:2,0:6:12.04:156,12,0	./.	./.	0/0:9,0:18:6.14:0,6,42	0/0:8,0:20:23.78:0,24,166	0/0:12,0:22:17.85:0,18,125	1/1:50,0:48:26.93:238,27,0	1/1:17,0:38:36.12:469,36,0	1/1:16,2:21:15.05:232,15,0	1/1:9,0:14:9.03:117,9,0	0/0:27,0:28:57.13:0,57,700	0/0:24,0:26:54.09:0,54,654	0/0:25,0:25:42.13:0,42,536	1/1:13,29:45:27.01:1163,27,0	1/1:19,28:47:36.04:1335,36,0	1/1:24,4:31:21.07:346,21,0	1/1:6,11:17:24.08:458,24,0	0/0:17,0:18:14.99:0,15,152	0/0:13,0:13:12:0,12,139	0/0:29,0:29:39.10:0,39,482	0/0:13,0:13:24.08:0,24,314	0/0:8,0:8:9.01:0,9,89	0/0:59,0:59:87.08:0,87,1189	0/0:8,0:8:15.04:0,15,182	1/1:12,1:25:33.16:390,33,0	1/1:16,3:41:55.51:840,56,0	1/1:9,0:20:27.09:352,27,0
chr10	15172588	.	GATTT	G	1152.67	PASS	AC=14;AF=0.368;AN=38;BaseQRankSum=4.153;DP=241;FS=4.711;HRun=0;HaplotypeScore=43.1777;InbreedingCoeff=0.6600;MQ=70.15;MQ0=3;MQRankSum=-0.572;QD=15.37;ReadPosRankSum=1.519;VQSLOD=2.6521;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:8:15.05:0,15,316	1/1:6,0:5:3.01:44,3,0	./.	./.	0/0:6,0:6:9.03:0,9,180	0/0:13,0:12:18.06:0,18,391	./.	./.	1/1:4,2:6:6.02:93,6,0	1/1:3,2:5:6.02:93,6,0	1/1:5,3:8:3.01:46,3,0	0/0:2,0:2:3.01:0,3,49	0/0:2,0:3:3.01:0,3,52	./.	./.	0/0:4,0:4:6.02:0,6,141	1/1:10,9:19:24.08:372,24,0	0/0:19,0:19:39.13:0,39,885	0/0:11,0:9:9.03:0,9,198	0/0:10,0:10:9.03:0,9,212	0/0:1,0:1:3.01:0,3,71	./.	./.	0/0:1,0:1:3.01:0,3,31	0/0:6,0:8:15.04:0,15,217	./.	1/1:4,3:7:12.04:183,12,0	1/1:10,14:24:30.10:465,30,0
chr10	15174488	.	AC	A	6234.73	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=12.420;DP=595;FS=6.324;HRun=4;HaplotypeScore=58.4543;InbreedingCoeff=0.9995;MQ=78.93;MQ0=0;MQRankSum=-1.344;QD=32.64;ReadPosRankSum=0.642;VQSLOD=5.3529;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,105,1452	1/1:0,15:15:39.12:468,39,0	0/0:11,0:11:30.10:0,30,404	0/0:21,0:21:56.95:0,57,735	0/0:14,0:14:33.11:0,33,460	0/0:13,0:13:36.12:0,36,504	0/0:12,0:12:36.12:0,36,504	1/1:2,25:27:72.19:841,72,0	1/1:2,26:28:75.23:899,75,0	1/1:1,21:22:63.19:756,63,0	1/1:2,16:18:51.16:608,51,0	0/0:29,0:29:81.27:0,81,1134	0/0:27,0:27:78.26:0,78,1091	0/0:29,0:29:81.24:0,81,1113	0/0:28,0:28:81.24:0,81,1097	0/0:26,0:26:75.25:0,75,1048	1/1:1,17:18:51.16:612,51,0	0/0:20,0:20:57.17:0,57,779	0/0:25,0:25:63.19:0,63,845	0/0:13,0:13:39.13:0,39,546	0/0:43,0:43:99:0,123,1717	0/0:17,0:17:48.16:0,48,671	0/0:9,0:9:27.09:0,27,378	0/0:11,0:11:30.09:0,30,403	0/0:17,0:17:51.16:0,51,695	1/1:1,31:32:90.27:1078,90,0	1/1:0,20:20:51.16:612,51,0	1/1:1,10:11:30.09:360,30,0
chr10	15175492	.	CCCAGTCAG	C	798.38	PASS	AB=0.919;AC=10;AF=0.200;AN=50;BaseQRankSum=4.660;DP=316;FS=0.000;HRun=0;HaplotypeScore=63.2318;InbreedingCoeff=-0.0335;MQ=44.65;MQ0=56;MQRankSum=-5.377;QD=10.11;ReadPosRankSum=0.783;VQSLOD=1.1421;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:12:27.06:0,27,990	0/1:3,0:3:78.74:79,0,152	./.	./.	0/0:4,0:4:3.01:0,3,42	0/0:2,0:2:6.01:0,6,106	0/0:44,0:39:99:0,108,4370	1/1:9,1:1:3.01:88,3,0	0/1:5,1:6:99:158,0,344	0/1:7,0:5:0.14:0,0,43	0/0:4,1:5:2.94:0,3,26	0/0:9,0:9:21.06:0,21,785	0/0:12,0:11:30.09:0,30,1122	0/0:18,0:16:48.15:0,48,1925	0/0:5,0:5:9.03:0,9,398	0/0:2,0:2:6.02:0,6,262	0/1:15,12:22:99:400,0,857	0/0:12,0:12:36.12:0,36,1357	0/0:8,0:2:6:0,6,52	0/1:2,0:1:0:0,0,0	0/0:49,0:29:53.59:0,54,1455	./.	0/0:4,0:3:9.03:0,9,232	0/0:13,0:13:39.13:0,39,1604	0/0:11,0:7:15.03:0,15,461	0/1:17,0:10:37.94:38,0,441	0/1:3,1:4:40.43:79,0,40	0/1:3,0:2:80.90:81,0,125
chr10	15175516	.	CCCAGTCAG	C	623.46	PASS	AB=0.890;AC=8;AF=0.154;AN=52;BaseQRankSum=3.444;DP=266;FS=2.381;HRun=0;HaplotypeScore=46.5928;InbreedingCoeff=-0.0327;MQ=44.93;MQ0=54;MQRankSum=-4.022;QD=10.06;ReadPosRankSum=-1.186;VQSLOD=1.5371;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:7:15.05:0,15,566	0/1:4,0:3:43.14:43,0,230	0/0:9,0:1:3.01:0,3,41	0/0:13,0:2:3.01:0,3,39	0/0:4,0:3:0:0,0,0	0/0:1,0:1:3.01:0,3,136	0/0:35,0:32:90.31:0,90,3475	1/1:8,0:1:3.01:52,3,0	0/1:4,0:4:15.65:16,0,259	0/1:5,2:5:99:146,0,299	0/0:2,1:3:2.94:0,3,18	0/0:6,0:6:15.05:0,15,654	0/0:7,0:6:18.06:0,18,812	0/0:16,0:14:42.14:0,42,1758	0/0:5,0:5:12.04:0,12,449	0/0:2,0:2:3.01:0,3,114	0/1:26,1:22:99:333,0,520	0/0:11,0:11:33.11:0,33,1348	./.	0/0:2,0:1:0:0,0,0	0/0:41,0:17:6.02:0,6,272	./.	0/0:4,0:2:6.02:0,6,265	0/0:13,0:12:36.11:0,36,1519	0/0:7,0:4:6.02:0,6,188	0/1:6,2:3:78.80:79,0,151	0/1:3,1:4:76.80:77,0,140	0/0:3,0:1:2.99:0,3,23
chr10	15176192	.	CAA	C	10682.11	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-9.400;DP=778;FS=0.610;HRun=10;HaplotypeScore=114.1873;InbreedingCoeff=0.9999;MQ=76.22;MQ0=2;MQRankSum=-1.462;QD=25.43;ReadPosRankSum=3.510;VQSLOD=4.5086;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:48:89.72:0,90,868	1/1:4,13:17:33.07:367,33,0	0/0:21,0:21:39.12:0,39,557	0/0:15,0:19:39.60:0,40,438	1/1:2,24:26:63.07:685,63,0	1/1:1,25:26:69.18:769,69,0	1/1:1,26:27:57.15:635,57,0	1/1:4,28:33:79.01:911,79,0	1/1:2,31:33:84.22:936,84,0	1/1:5,28:33:78.19:866,78,0	1/1:4,17:21:44.90:483,45,0	0/0:6,0:28:63.09:0,63,612	0/0:2,0:23:44.92:0,45,408	0/0:8,0:32:66.02:0,66,673	1/1:4,36:40:90.22:1003,90,0	1/1:5,33:38:84.21:933,84,0	1/1:3,22:24:42.11:468,42,0	1/1:3,21:24:54.14:602,54,0	0/0:24,0:27:71.67:0,72,1002	0/0:23,0:24:62.63:0,63,864	0/0:19,0:22:51.63:0,52,771	0/0:7,0:36:73.89:0,74,766	0/0:5,0:30:62.54:0,63,581	0/0:6,0:22:49.57:0,50,484	0/0:3,0:25:57.09:0,57,542	1/1:4,26:30:78.19:861,78,0	1/1:4,28:33:68.98:827,69,0	1/1:4,10:14:30.07:334,30,0
chr10	15177218	.	CCAG	C	1188.46	PASS	AB=0.883;AC=28;AF=0.933;AN=30;BaseQRankSum=-1.895;DP=71;FS=7.172;HRun=0;HaplotypeScore=22.7990;InbreedingCoeff=-0.2080;MQ=149.47;MQ0=3;MQRankSum=-2.490;QD=19.81;ReadPosRankSum=-2.584;VQSLOD=1.2898;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/1:15,3:16:30.48:194,0,30	0/1:8,1:8:25.08:73,0,25	1/1:2,0:2:3.01:47,3,0	./.	1/1:2,0:2:6.01:74,6,0	1/1:0,6:6:15.04:219,15,0	./.	1/1:4,0:4:12.03:162,12,0	1/1:2,0:2:3.01:48,3,0	./.	1/1:2,0:2:3.01:49,3,0	1/1:2,0:2:6.02:97,6,0	1/1:3,0:3:3.01:35,3,0	./.	./.	./.	./.	./.	1/1:2,0:2:3.01:38,3,0	1/1:2,0:2:6.02:78,6,0	1/1:3,0:3:6.02:97,6,0	1/1:1,0:1:3.01:46,3,0	./.	1/1:1,0:1:2.97:20,3,0	./.	./.
chr10	15177542	.	A	AAC	4225.66	PASS	AB=0.514;AC=11;AF=0.196;AN=56;BaseQRankSum=-10.141;DP=482;FS=32.327;HRun=0;HaplotypeScore=69.4146;InbreedingCoeff=0.8863;MQ=72.08;MQ0=0;MQRankSum=-5.620;QD=44.95;ReadPosRankSum=2.436;VQSLOD=3.4789;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:75.20:0,75,1012	0/0:2,0:2:6.02:0,6,86	0/0:15,0:12:42.12:0,42,575	0/0:18,0:13:31.26:0,31,406	1/1:0,13:13:30.10:536,30,0	1/1:0,13:13:36.12:658,36,0	1/1:0,20:20:60.21:1097,60,0	0/0:21,0:21:54.16:0,54,736	0/0:14,0:14:42.14:0,42,599	0/0:20,0:20:60.20:0,60,856	0/0:14,0:14:38.87:0,39,546	0/0:30,0:30:90.30:0,90,1283	0/0:25,0:25:75.25:0,75,1065	0/0:18,0:18:54.09:0,54,713	1/1:0,22:22:60.21:1096,60,0	0/1:1,16:19:3.79:619,0,4	0/0:14,0:14:33.07:0,33,449	1/1:1,6:7:12.04:220,12,0	0/0:15,0:15:42.10:0,42,576	0/0:23,0:23:69.23:0,69,975	0/0:14,0:14:33.11:0,33,463	0/0:15,0:15:45.15:0,45,596	0/0:8,0:8:24.08:0,24,328	0/0:13,0:13:11.60:0,12,167	0/0:23,0:23:69.23:0,69,967	0/0:27,0:27:81.27:0,81,1152	0/0:20,0:19:60.12:0,60,811	0/0:9,0:9:24.08:0,24,344
chr10	15178278	.	CACACAG	C	2327.98	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=1.727;DP=699;FS=10.352;HRun=0;HaplotypeScore=184.3133;InbreedingCoeff=0.3985;MQ=61.61;MQ0=4;MQRankSum=-6.273;QD=6.65;ReadPosRankSum=1.492;VQSLOD=2.1131;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:9,23:32:9.03:157,9,0	0/0:12,0:12:23.68:0,24,160	0/0:36,0:24:15.14:0,15,190	0/0:25,0:14:22.35:0,22,208	0/1:20,0:20:17.65:18,0,96	0/1:23,0:23:62.91:63,0,162	0/1:21,0:21:29.65:30,0,85	0/0:31,0:30:52.75:0,53,452	0/0:29,0:29:36.74:0,37,231	0/0:34,0:34:54.45:0,54,387	0/0:21,0:21:18.63:0,19,120	1/1:6,24:30:29.84:564,30,0	1/1:9,17:26:24.40:443,24,0	1/1:7,19:26:21.07:412,21,0	0/0:36,0:36:72.16:0,72,1637	0/0:33,0:33:84.16:0,84,1850	0/0:29,0:29:11.45:0,11,74	0/0:29,0:29:65.86:0,66,1207	0/1:14,0:14:79.78:80,0,104	0/1:19,0:19:70.78:71,0,237	0/1:28,0:28:99:135,0,118	1/1:9,17:26:9.50:177,10,0	1/1:6,13:19:5.38:128,5,0	1/1:5,13:18:3.01:48,3,0	1/1:6,18:24:8.79:161,9,0	0/0:22,0:22:40.41:0,40,301	0/1:24,0:23:36.81:37,0,113	0/0:12,0:12:11.47:0,11,80
chr10	15178290	.	G	GAC	191.01	PASS	AB=0.825;AC=4;AF=0.071;AN=56;BaseQRankSum=0.085;DP=704;FS=0.000;HRun=0;HaplotypeScore=177.3484;InbreedingCoeff=-0.0114;MQ=55.66;MQ0=8;MQRankSum=1.877;QD=2.48;ReadPosRankSum=-2.072;VQSLOD=2.1884;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:15.31:0,15,117	0/0:15,0:15:30.08:0,30,371	0/0:30,0:18:31.65:0,32,363	0/0:23,0:11:30.02:0,30,368	0/0:22,0:22:24.07:0,24,302	0/0:22,0:22:36.10:0,36,448	0/1:18,0:18:9.56:10,0,154	0/0:32,0:30:65.93:0,66,741	0/0:30,0:30:54.17:0,54,684	0/0:33,0:32:74.44:0,74,847	0/0:25,0:25:24.06:0,24,287	0/0:34,0:35:25.18:0,25,243	0/0:23,0:26:19.87:0,20,93	0/0:25,0:26:0.37:0,0,94	0/0:35,0:35:84.26:0,84,1127	0/0:34,0:34:90.29:0,90,1226	0/0:32,0:32:28.29:0,28,277	0/0:29,0:29:75.24:0,75,974	0/1:11,1:12:35.74:50,0,36	0/1:10,10:20:5.66:165,0,6	0/1:16,11:27:64.28:72,0,64	0/0:24,0:25:16.12:0,16,107	0/0:18,0:18:5.39:0,5,29	0/0:18,0:19:5.75:0,6,52	0/0:22,0:24:11.48:0,11,82	0/0:28,0:27:61.38:0,61,675	0/0:23,0:22:52.04:0,52,637	0/0:7,0:7:15.05:0,15,195
chr10	15178296	.	GACAC	G	4252.66	PASS	AB=0.958;AC=31;AF=0.554;AN=56;BaseQRankSum=10.761;DP=692;FS=4.588;HRun=0;HaplotypeScore=178.9957;InbreedingCoeff=0.1408;MQ=54.42;MQ0=8;MQRankSum=-8.888;QD=8.24;ReadPosRankSum=3.044;VQSLOD=4.0679;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:31,0:31:55.03:55,0,159	1/1:8,8:16:9.03:144,9,0	0/0:27,0:14:3:0,3,25	0/0:23,0:11:2.99:0,3,23	1/1:9,0:22:8.64:55,9,0	1/1:10,0:21:12.01:112,12,0	1/1:8,0:19:7.56:59,8,0	1/1:20,0:33:26.80:340,27,0	1/1:11,19:30:30.10:481,30,0	1/1:15,17:31:51.12:733,51,0	0/1:8,15:23:5.40:133,0,5	0/1:37,0:37:99:146,0,247	0/1:27,0:27:61.12:152,0,61	0/1:25,0:26:16.84:174,0,17	0/0:29,0:31:53.73:0,54,981	0/0:30,0:33:48.97:0,49,1018	0/1:31,1:32:6.75:257,0,7	0/0:25,0:30:35.11:0,35,687	0/0:12,0:12:18.50:0,18,253	0/0:20,0:20:24.05:0,24,346	0/1:27,0:27:13.34:13,0,210	0/1:24,0:24:56.05:56,0,116	0/1:18,0:18:30.20:30,0,37	0/1:19,0:19:17.52:18,0,82	0/1:23,0:24:33.84:66,0,34	1/1:19,5:23:42.11:615,42,0	1/1:10,8:21:22.47:516,22,0	1/1:3,4:7:6.02:96,6,0
chr10	15178300	.	C	CAG	2976.51	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=1.728;DP=697;FS=4.759;HRun=0;HaplotypeScore=171.5435;InbreedingCoeff=0.7303;MQ=54.04;MQ0=10;MQRankSum=-1.636;QD=10.19;ReadPosRankSum=-1.212;VQSLOD=3.2743;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:35:6.58:0,7,273	1/1:16,0:16:17.34:166,17,0	0/0:24,0:10:14.39:0,14,138	0/0:24,0:10:26.98:0,27,237	0/0:22,0:22:23.77:0,24,174	0/0:18,0:18:26.80:0,27,199	0/0:18,0:18:14.84:0,15,110	1/1:32,0:30:71.81:725,72,0	1/1:29,0:29:36.60:213,37,0	1/1:31,0:30:50.41:591,50,0	1/1:22,0:22:8.56:57,9,0	0/0:37,0:37:23.13:0,23,457	0/0:27,0:27:30.29:0,30,249	0/1:28,0:28:50:50,0,182	0/0:32,0:32:84.09:0,84,1037	0/0:34,0:34:96.04:0,96,1148	1/1:4,26:30:10.83:264,11,0	0/0:30,0:30:71.71:0,72,779	0/0:13,0:13:17.30:0,17,284	0/1:20,0:20:48.08:48,0,178	0/1:27,0:27:4.42:4,0,255	0/0:25,0:25:14.46:0,14,237	0/0:19,0:19:11.60:0,12,115	0/0:19,0:19:8.92:0,9,107	0/0:26,0:26:14.48:0,14,117	1/1:21,5:26:67.23:685,67,0	1/1:21,2:22:28.32:300,28,0	1/1:7,0:7:12.05:81,12,0
chr10	15179569	.	AAAAAG	A	1269.64	PASS	AB=0.987;AC=14;AF=0.250;AN=56;BaseQRankSum=1.512;DP=513;FS=9.320;HRun=0;HaplotypeScore=95.5344;InbreedingCoeff=0.5823;MQ=56.64;MQ0=15;MQRankSum=2.822;QD=7.51;ReadPosRankSum=0.502;VQSLOD=1.5055;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:31:72.03:0,72,1090	0/1:17,0:17:12.89:116,0,13	0/0:30,0:8:20.73:0,21,163	0/0:18,0:11:13.16:0,13,207	0/0:21,0:21:53.25:0,53,477	0/0:11,0:11:26.87:0,27,236	0/0:18,0:18:38.07:0,38,355	0/1:17,1:18:1.49:117,0,1	1/1:11,0:11:5.86:136,6,0	1/1:21,0:21:8.68:229,9,0	0/1:16,0:16:18.71:90,0,19	0/0:29,0:26:63.67:0,64,853	0/0:13,0:13:32.94:0,33,507	0/0:15,0:14:30.81:0,31,419	0/0:18,0:16:38.72:0,39,491	0/0:21,0:21:38.80:0,39,493	1/1:30,1:29:6.94:269,7,0	0/0:16,0:16:43.13:0,43,534	0/0:11,0:10:27.07:0,27,399	0/0:15,0:15:18.01:0,18,247	0/0:9,0:9:24.03:0,24,328	0/0:13,0:13:29.73:0,30,252	0/0:15,0:15:38.92:0,39,601	0/0:13,0:13:20.88:0,21,312	0/0:22,0:21:45.96:0,46,502	1/1:9,16:24:9.29:287,9,0	0/1:19,0:18:40.64:114,0,41	1/1:7,4:11:7.89:80,8,0
chr10	15179570	.	AAAAG	A	1666.73	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-0.167;DP=506;FS=4.409;HRun=0;HaplotypeScore=85.6078;InbreedingCoeff=0.9708;MQ=58.42;MQ0=14;MQRankSum=1.558;QD=10.55;ReadPosRankSum=-0.795;VQSLOD=2.4724;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:32:66.94:0,67,833	1/1:6,10:16:17.79:156,18,0	0/0:30,0:8:20.21:0,20,155	0/0:19,0:12:11.05:0,11,181	0/0:20,0:20:50.84:0,51,360	0/0:11,0:11:24.45:0,24,160	0/0:18,0:18:17.06:0,17,217	1/1:17,0:17:17.44:154,17,0	1/1:12,0:12:15.63:170,16,0	1/1:21,0:21:36.72:286,37,0	1/1:5,9:14:19.46:123,19,0	0/0:28,0:26:60.10:0,60,685	0/0:14,0:14:30.05:0,30,424	0/0:17,0:16:33.34:0,33,388	0/0:16,0:14:29.84:0,30,375	0/0:21,0:21:28.18:0,28,357	1/1:29,2:29:40.66:350,41,0	0/0:17,0:17:42.23:0,42,465	0/0:12,0:11:30:0,30,364	0/0:15,0:15:17.88:0,18,191	0/0:10,0:10:26.64:0,27,252	0/0:14,0:14:27.79:0,28,199	0/0:14,0:14:31.15:0,31,427	0/0:13,0:13:20.87:0,21,257	0/0:22,0:21:40.16:0,40,342	1/1:20,1:20:40.46:373,40,0	1/1:17,0:16:10.81:161,11,0	1/1:7,2:9:11.37:103,11,0
chr10	15179573	.	AG	A	1606.66	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=0.987;DP=449;FS=4.191;HRun=1;HaplotypeScore=58.1536;InbreedingCoeff=0.8888;MQ=64.31;MQ0=14;MQRankSum=-1.753;QD=11.64;ReadPosRankSum=-3.390;VQSLOD=0.7483;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,1:26:49.11:0,49,382	1/1:12,0:12:17.57:109,18,0	0/0:32,0:10:19.70:0,20,172	0/0:19,0:12:10.28:0,10,148	0/0:22,0:22:49.25:0,49,352	0/0:11,0:11:21.64:0,22,106	0/0:17,0:17:29.76:0,30,164	1/1:12,0:12:21.29:163,21,0	1/1:9,0:9:26.85:201,27,0	1/1:3,15:18:40.20:311,40,0	1/1:14,0:14:20.79:143,21,0	0/0:24,0:22:52.38:0,52,408	0/0:12,0:12:32.30:0,32,245	0/0:17,0:16:32.34:0,32,264	0/0:12,0:10:10.06:0,10,168	0/0:17,0:17:28:0,28,202	1/1:21,0:19:47.52:350,48,0	0/0:17,0:17:22.37:0,22,268	0/0:14,0:13:15.31:0,15,216	0/0:13,0:13:20.81:0,21,149	0/1:9,0:9:4.99:5,0,97	0/0:10,0:10:7.49:0,7,146	0/0:11,0:11:24.93:0,25,202	0/0:10,3:13:7.95:0,8,145	0/0:20,0:20:30.03:0,30,226	1/1:19,0:18:26.85:292,27,0	1/1:16,0:15:28.55:185,29,0	1/1:8,0:8:11.17:56,11,0
chr10	15179950	.	C	CT	2134.79	PASS	AB=0.643;AC=13;AF=0.232;AN=56;BaseQRankSum=-3.746;DP=645;FS=2.026;HRun=11;HaplotypeScore=71.1661;InbreedingCoeff=0.4680;MQ=59.16;MQ0=15;MQRankSum=-3.777;QD=10.07;ReadPosRankSum=-1.759;VQSLOD=2.6999;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:61.61:0,62,466	1/1:5,9:13:17.32:206,17,0	0/0:9,0:6:2.96:0,3,22	0/0:10,0:8:2.02:0,2,6	0/0:29,0:30:43.67:0,44,331	0/0:18,0:19:40.75:0,41,294	0/0:27,1:26:16.60:0,17,316	1/1:15,11:24:6.81:244,7,0	0/1:8,7:15:10.69:80,0,11	1/1:15,17:31:21.85:397,22,0	0/1:12,13:25:10.67:247,0,11	0/0:21,0:20:44.71:0,45,344	0/0:17,0:18:25.48:0,25,179	0/0:19,0:20:28.79:0,29,215	0/0:38,2:40:45.38:0,45,527	0/0:24,1:26:31.38:0,31,416	0/1:10,14:24:47.87:281,0,48	0/0:21,0:20:38.77:0,39,302	0/0:25,1:23:14.34:0,14,294	0/0:27,0:25:43.52:0,44,323	0/0:13,0:13:17.01:0,17,138	0/0:23,0:23:43.81:0,44,331	0/0:17,0:17:29.82:0,30,232	0/0:23,0:23:56.70:0,57,439	0/0:22,1:22:15.31:0,15,294	1/1:14,14:29:33.06:331,33,0	0/1:9,20:29:12.75:412,0,13	0/1:8,9:16:8.20:107,0,8
chr10	15185174	.	GTCTCTC	G	1873.96	PASS	AB=0.981;AC=34;AF=0.773;AN=44;BaseQRankSum=-1.819;DP=601;FS=0.000;HRun=0;HaplotypeScore=110.4797;InbreedingCoeff=0.1284;MQ=67.91;MQ0=23;MQRankSum=2.594;QD=4.85;ReadPosRankSum=3.879;VQSLOD=1.7988;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:32:5.34:5,0,103	1/1:11,0:12:2.75:55,3,0	./.	./.	1/1:23,0:10:3.01:41,3,0	1/1:18,0:12:3.01:41,3,0	0/0:22,0:14:9.09:0,9,117	./.	1/1:12,0:12:11.06:197,11,0	1/1:20,0:19:2.99:24,3,0	1/1:19,0:22:3.01:45,3,0	0/1:15,0:14:46.12:46,0,124	0/0:20,0:19:1.83:0,2,4	1/1:24,8:32:2.71:7,3,0	1/1:27,0:27:14.97:210,15,0	0/1:23,0:25:29.63:264,0,30	1/1:13,0:14:18.05:302,18,0	1/1:11,0:12:9.03:146,9,0	1/1:20,0:20:0.03:64,0,0	1/1:12,0:10:3.01:52,3,0	./.	1/1:18,0:19:3.01:43,3,0	./.	0/1:25,0:25:3.03:6,0,3	0/0:31,0:31:0:0,0,0	1/1:23,0:23:9.03:165,9,0	1/1:22,0:22:14.22:275,14,0	./.
chr10	15185176	.	C	CT	319.67	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=3.521;DP=607;FS=2.166;HRun=1;HaplotypeScore=82.3120;InbreedingCoeff=0.9717;MQ=64.38;MQ0=28;MQRankSum=-0.310;QD=4.99;ReadPosRankSum=-1.070;VQSLOD=0.1351;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:33:57.63:0,58,704	0/0:12,0:12:33.10:0,33,408	0/0:21,0:14:39.12:0,39,496	0/0:33,0:19:40.35:0,40,552	1/1:21,0:8:11.19:106,11,0	1/1:21,1:15:20.43:249,20,0	1/1:6,15:12:12.16:99,12,0	0/0:27,0:26:46.98:0,47,499	0/0:12,0:12:27.51:0,28,292	0/0:17,0:16:43.38:0,43,538	0/0:22,0:22:42.13:0,42,524	0/0:16,0:14:39.10:0,39,467	0/0:22,0:21:40.54:0,41,498	0/0:29,0:29:42.07:0,42,534	0/0:27,0:27:57.14:0,57,673	0/0:24,0:24:66.15:0,66,782	0/0:16,0:15:39.04:0,39,419	0/0:12,0:12:23.97:0,24,259	0/0:20,0:20:60.14:0,60,721	0/0:12,0:10:24.54:0,25,294	0/0:19,0:15:33.09:0,33,406	0/0:17,0:17:33.08:0,33,408	0/0:23,0:23:39.12:0,39,493	0/0:30,0:29:42.12:0,42,521	0/0:30,0:30:59.59:0,60,738	0/0:23,0:23:66.59:0,67,794	0/0:20,0:20:54.11:0,54,622	0/0:23,0:21:48.63:0,49,612
chr10	15185177	.	TC	T	390.13	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=4.008;DP=605;FS=0.979;HRun=1;HaplotypeScore=72.0349;InbreedingCoeff=0.9710;MQ=63.53;MQ0=29;MQRankSum=-0.460;QD=6.19;ReadPosRankSum=-0.315;VQSLOD=0.2279;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:33:57.55:0,58,705	0/0:12,0:12:32.79:0,33,389	0/0:20,0:13:39.12:0,39,496	0/0:33,0:19:40.35:0,40,552	1/1:0,20:7:11.97:130,12,0	1/1:9,13:15:21.05:271,21,0	1/1:18,3:12:12.45:124,12,0	0/0:27,0:26:49.06:0,49,505	0/0:12,0:12:20.40:0,20,221	0/0:17,0:16:44.27:0,44,539	0/0:22,0:22:41.97:0,42,510	0/0:16,0:14:36.56:0,37,443	0/0:21,0:20:42.31:0,42,502	0/0:29,0:29:42.53:0,43,534	0/0:27,0:27:48.37:0,48,579	0/0:26,0:25:57.67:0,58,682	0/0:16,0:15:26.81:0,27,287	0/0:12,0:12:18.79:0,19,200	0/0:20,0:20:56.18:0,56,701	0/0:12,0:10:22.78:0,23,271	0/0:19,0:15:33.09:0,33,406	0/0:17,0:17:31.64:0,32,386	0/0:22,0:22:39.12:0,39,493	0/0:30,0:29:42.02:0,42,499	0/0:30,0:30:59.72:0,60,738	0/0:23,0:23:62.12:0,62,738	0/0:20,0:20:43.20:0,43,504	0/0:23,0:21:50.04:0,50,615
chr10	15185229	.	TCACACACA	T	1515.27	PASS	AB=0.962;AC=20;AF=0.400;AN=50;BaseQRankSum=-0.779;DP=451;FS=6.205;HRun=0;HaplotypeScore=107.2453;InbreedingCoeff=0.5212;MQ=40.82;MQ0=48;MQRankSum=1.698;QD=8.24;ReadPosRankSum=-0.089;VQSLOD=1.5585;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:24:27.83:0,28,357	1/1:7,3:9:0.94:2,1,0	./.	0/0:1,0:1:3.01:0,3,106	1/1:12,0:12:12.51:198,13,0	1/1:17,1:17:21.03:265,21,0	1/1:23,1:18:17.53:237,18,0	0/1:22,2:19:12.09:137,0,12	./.	1/1:9,2:10:4.09:147,4,0	./.	0/0:18,0:16:22.54:0,23,323	0/0:16,0:15:23.83:0,24,360	0/0:23,0:23:17.26:0,17,210	0/0:18,0:17:11.99:0,12,208	0/0:27,0:24:7.38:0,7,214	0/0:19,4:20:3.01:0,3,74	0/0:11,0:8:6.87:0,7,100	0/0:14,0:14:27.08:0,27,670	1/1:15,0:11:0.47:1,0,0	0/0:15,0:9:3.01:0,3,100	0/1:22,0:21:16.42:16,0,210	0/0:7,0:6:1.55:0,2,4	0/0:32,0:27:33.07:0,33,534	0/0:8,0:8:9.03:0,9,177	1/1:10,5:14:0.63:331,1,0	1/1:17,6:21:2.82:73,3,0	1/1:6,0:6:11.99:267,12,0
chr10	15185400	.	G	GT	1628.26	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-5.892;DP=660;FS=1.833;HRun=6;HaplotypeScore=70.2633;InbreedingCoeff=0.9931;MQ=74.81;MQ0=0;MQRankSum=-0.982;QD=24.67;ReadPosRankSum=0.871;VQSLOD=3.6161;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,111,1106	0/0:6,0:6:18.03:0,18,178	0/0:24,0:23:18.70:0,19,279	0/0:20,0:16:21.68:0,22,202	0/0:25,0:25:69.04:0,69,682	0/0:26,0:26:74.28:0,74,719	0/0:26,0:26:72.11:0,72,709	0/0:31,0:31:81.13:0,81,810	0/0:21,0:21:60.13:0,60,611	0/0:26,0:26:72.16:0,72,729	0/0:25,0:25:69.15:0,69,702	0/0:27,0:27:72.12:0,72,719	0/0:22,0:22:57.12:0,57,577	0/0:24,0:24:66.14:0,66,670	1/1:4,23:27:51.16:639,51,0	1/1:3,20:23:48.15:603,48,0	0/0:33,0:33:93.14:0,93,918	1/1:1,15:16:42.13:528,42,0	0/0:12,0:12:30.06:0,30,300	0/0:22,0:22:63.12:0,63,635	0/0:23,0:23:57.12:0,57,575	0/0:19,0:19:51.09:0,51,512	0/0:14,0:14:36.01:0,36,343	0/0:21,0:21:56.96:0,57,579	0/0:31,0:31:90.11:0,90,898	0/0:32,0:32:83.38:0,83,823	0/0:29,0:29:81.04:0,81,796	0/0:15,0:15:45.10:0,45,458
chr10	15186896	.	CTTTTTCTTT	C	2966.55	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=10.461;DP=725;FS=0.000;HRun=0;HaplotypeScore=194.9227;InbreedingCoeff=0.9966;MQ=63.45;MQ0=6;MQRankSum=-9.327;QD=38.03;ReadPosRankSum=0.171;VQSLOD=3.0815;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:90.27:0,90,3907	0/0:13,0:13:39.09:0,39,1433	0/0:22,0:19:40.70:0,41,1287	0/0:11,0:10:18.06:0,18,601	1/1:7,25:32:38.90:840,39,0	1/1:2,18:20:45.02:1075,45,0	1/1:6,20:26:48.15:1195,48,0	0/0:38,0:37:57.18:0,57,2241	0/0:18,0:18:42.13:0,42,1823	0/0:26,0:25:69.23:0,69,2706	0/0:27,0:27:66.23:0,66,2941	0/0:24,0:24:60.19:0,60,2353	0/0:24,0:24:60.19:0,60,2470	0/0:25,0:25:54.66:0,55,2318	0/0:41,0:41:87.30:0,87,3933	0/0:31,0:31:81.28:0,81,3414	0/0:42,0:42:99:0,111,4879	0/0:27,0:27:78.27:0,78,3263	0/0:27,0:25:51.18:0,51,2031	0/0:32,0:31:81.23:0,81,3470	0/0:11,0:11:27.09:0,27,1188	0/0:20,0:20:48.16:0,48,1968	0/0:23,0:23:69.24:0,69,2957	0/0:26,0:26:69.24:0,69,2964	0/0:25,0:25:66.23:0,66,2867	0/0:28,0:28:63.22:0,63,2769	0/0:39,0:39:99:0,102,4560	0/0:12,0:12:36.12:0,36,1426
chr10	15189665	.	TA	T	1975.76	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.217;DP=606;FS=4.773;HRun=1;HaplotypeScore=63.9570;InbreedingCoeff=0.9734;MQ=78.45;MQ0=0;MQRankSum=-1.012;QD=31.36;ReadPosRankSum=1.098;VQSLOD=3.2455;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:94.84:0,95,1419	0/0:4,0:4:9.01:0,9,119	0/0:13,0:13:32.08:0,32,435	0/0:16,0:16:43.92:0,44,443	1/1:0,18:19:48.53:622,49,0	1/1:3,13:19:36.60:645,37,0	1/1:0,24:25:63.18:852,63,0	0/0:22,0:22:54.07:0,54,732	0/0:28,0:28:84.22:0,84,1213	0/0:20,0:19:54.09:0,54,684	0/0:14,0:14:39.09:0,39,541	0/0:25,0:25:71.36:0,71,958	0/0:30,0:30:90.24:0,90,1317	0/0:37,0:37:99:0,105,1515	0/0:23,0:23:69.13:0,69,898	0/0:17,0:17:45.13:0,45,666	0/0:35,0:35:99:0,105,1543	0/0:29,0:29:87.08:0,87,1162	0/0:16,0:16:47.98:0,48,634	0/0:15,0:15:42.09:0,42,571	0/0:55,0:55:99:0,165,2322	0/0:12,0:12:28.97:0,29,399	0/0:12,0:12:36.07:0,36,492	0/0:25,0:25:70.52:0,71,1035	0/0:14,0:14:39.07:0,39,508	0/0:28,0:28:81.14:0,81,1078	0/0:10,0:10:30.09:0,30,450	0/0:5,0:5:15.03:0,15,208
chr10	15189666	.	AG	A	644.90	PASS	AB=0.929;AC=7;AF=0.125;AN=56;BaseQRankSum=10.839;DP=616;FS=10.336;HRun=9;HaplotypeScore=69.5780;InbreedingCoeff=0.8794;MQ=78.10;MQ0=0;MQRankSum=-1.039;QD=8.49;ReadPosRankSum=-0.897;VQSLOD=0.8822;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,2:39:41.38:0,41,953	0/0:5,0:5:11.99:0,12,114	0/0:13,0:13:26.30:0,26,252	0/0:15,0:16:25.76:0,26,254	1/1:19,0:19:43.51:237,44,0	1/1:19,0:19:15.74:216,16,0	1/1:25,0:25:60.43:332,60,0	0/0:25,0:25:45:0,45,458	0/0:27,0:28:71.99:0,72,794	0/0:20,0:19:33.09:0,33,373	0/0:15,0:15:16.03:0,16,383	0/0:26,0:26:54.11:0,54,599	0/0:30,0:30:78.20:0,78,878	0/0:37,0:37:96.24:0,96,1070	0/0:23,0:23:45.13:0,45,519	0/0:17,1:18:42.12:0,42,476	0/0:34,0:34:90.26:0,90,1030	0/0:29,0:29:60.18:0,60,692	0/0:15,0:15:33.09:0,33,373	0/0:14,0:16:32.93:0,33,360	0/0:58,0:58:99:0,138,1557	0/1:12,1:13:0.41:0,0,237	0/0:12,0:12:27.08:0,27,311	0/0:23,1:24:35.72:0,36,665	0/0:14,0:14:24.07:0,24,276	0/0:28,0:28:57.16:0,57,648	0/0:10,0:10:27.08:0,27,312	0/0:5,0:5:12.04:0,12,138
chr10	15194493	.	T	TCTCTCC	16826.48	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=0.627;DP=798;FS=0.343;HRun=0;HaplotypeScore=150.8653;InbreedingCoeff=0.9728;MQ=64.29;MQ0=10;MQRankSum=-14.415;QD=38.24;ReadPosRankSum=-0.932;VQSLOD=4.3534;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:65,0:65:99:0,162,3120	1/1:10,0:10:9.03:252,9,0	0/0:60,0:35:31.54:0,32,570	0/0:59,0:33:30.69:0,31,544	1/1:8,16:25:24.04:672,24,0	1/1:4,20:24:24.08:801,24,0	1/1:3,20:26:48.11:1420,48,0	1/1:42,0:42:55.43:1166,55,0	1/1:21,0:21:27.09:777,27,0	1/1:29,0:29:54.18:1439,54,0	1/1:19,0:19:42.07:1045,42,0	0/0:26,0:26:69.20:0,69,1317	0/0:24,0:24:63.22:0,63,1286	0/0:31,0:31:81.24:0,81,1592	1/1:5,28:36:50.98:1456,51,0	1/1:7,23:31:39.10:1221,39,0	1/1:23,0:23:29.99:665,30,0	1/1:3,13:19:15.05:459,15,0	1/1:8,15:27:57.04:1173,57,0	1/1:5,12:19:27.01:698,27,0	1/1:4,11:18:7.05:420,7,0	0/0:15,0:15:39.12:0,39,796	0/0:17,0:17:39.13:0,39,806	0/0:36,0:36:84.25:0,84,1739	0/0:23,0:23:51.13:0,51,1049	1/1:30,0:30:72.19:1831,72,0	1/1:27,0:27:32.98:934,33,0	1/1:13,0:13:15.05:399,15,0
chr10	15194504	.	C	CCCTCTT	19550.68	PASS	AB=1.000;AC=27;AF=0.482;AN=56;BaseQRankSum=-1.472;DP=829;FS=0.305;HRun=0;HaplotypeScore=159.2027;InbreedingCoeff=0.3550;MQ=68.94;MQ0=11;MQRankSum=-13.155;QD=43.06;ReadPosRankSum=1.609;VQSLOD=4.6866;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:66,0:66:99:0,189,3785	1/1:2,10:12:14.57:351,15,0	0/0:65,0:41:41.35:0,41,1014	0/0:63,0:35:25.78:0,26,798	0/1:21,0:21:35.73:499,0,36	0/1:23,0:23:14.91:620,0,15	0/1:29,0:29:46.25:1037,0,46	1/1:17,27:45:99:2600,105,0	1/1:2,18:20:27.09:938,27,0	1/1:11,20:37:93.21:2695,93,0	1/1:2,17:22:48.12:1372,48,0	0/0:31,0:31:86.96:0,87,1661	0/0:23,0:23:69.21:0,69,1494	0/0:32,0:32:93.21:0,93,1894	0/1:36,0:36:25.28:1094,0,25	0/1:31,0:31:51.40:929,0,51	1/1:7,16:24:45.11:1236,45,0	0/1:20,0:20:51.92:222,0,52	0/1:26,0:25:30.99:693,0,31	0/1:18,0:18:77.02:495,0,77	0/1:17,0:17:60.70:298,0,61	0/0:14,0:14:39.13:0,39,870	0/0:19,0:19:47.93:0,48,958	0/0:36,0:36:93.28:0,93,1982	0/0:26,0:26:69.15:0,69,1291	1/1:5,26:33:87.12:2457,87,0	1/1:6,20:30:44.92:1481,45,0	1/1:3,7:10:18.06:535,18,0
chr10	15194812	.	TTG	T	3913.86	PASS	AB=0.967;AC=20;AF=0.357;AN=56;BaseQRankSum=11.879;DP=518;FS=3.508;HRun=0;HaplotypeScore=103.5072;InbreedingCoeff=0.8273;MQ=69.69;MQ0=1;MQRankSum=-3.241;QD=17.71;ReadPosRankSum=-0.563;VQSLOD=3.5662;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,99,1473	1/1:7,2:9:17.19:179,17,0	0/0:13,0:10:13.27:0,13,230	0/0:12,0:10:18.18:0,18,203	0/0:33,0:33:15.60:0,16,84	0/0:11,0:11:14.11:0,14,60	0/0:21,0:21:34.48:0,34,170	1/1:30,0:30:75.99:645,76,0	1/1:10,0:10:26.94:219,27,0	1/1:19,0:19:53.99:414,54,0	1/1:20,1:21:44.60:443,45,0	0/0:11,0:11:33.10:0,33,532	0/0:19,0:19:54.16:0,54,884	0/0:21,0:21:60.17:0,60,961	0/0:8,0:8:11.55:0,12,99	0/1:15,0:15:31.63:32,0,122	1/1:27,0:27:71.80:568,72,0	0/1:26,2:28:97.52:98,0,243	0/0:18,0:18:54.09:0,54,606	0/0:20,0:20:55.12:0,55,553	0/0:7,0:7:21.04:0,21,224	0/0:16,0:16:48.14:0,48,745	0/0:15,0:15:39.12:0,39,660	0/0:9,0:9:27.09:0,27,446	0/0:29,0:29:87.27:0,87,1420	1/1:23,1:24:71.33:565,71,0	1/1:28,1:29:74.60:589,75,0	1/1:9,0:9:20.88:161,21,0
chr10	15194813	.	TG	T	6490.08	PASS	AB=0.917;AC=22;AF=0.393;AN=56;BaseQRankSum=5.408;DP=518;FS=4.695;HRun=1;HaplotypeScore=84.8469;InbreedingCoeff=0.8727;MQ=72.22;MQ0=1;MQRankSum=-1.003;QD=28.34;ReadPosRankSum=-1.419;VQSLOD=4.1937;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:98.97:0,99,1148	1/1:5,5:10:29.71:304,30,0	0/0:14,0:11:12.85:0,13,177	0/0:14,0:12:9.54:0,10,169	0/0:33,0:33:60.32:0,60,243	0/0:11,0:11:20.93:0,21,102	0/0:20,0:20:52.27:0,52,264	1/1:4,26:30:83.48:870,83,0	1/1:0,10:10:27.09:375,27,0	1/1:0,19:19:57.09:728,57,0	1/1:7,13:20:58.57:678,59,0	0/0:11,0:11:33.09:0,33,422	0/0:18,0:18:54.16:0,54,692	0/0:20,0:20:60.16:0,60,760	0/1:8,1:9:0.26:56,0,0	1/1:14,1:15:3.08:123,3,0	1/1:0,27:27:72.24:1000,72,0	0/1:26,2:28:3.53:186,0,4	0/0:18,0:18:53.42:0,53,448	0/0:20,0:20:41.02:0,41,317	0/0:7,0:7:20.56:0,21,140	0/0:16,0:16:48.12:0,48,590	0/0:14,0:14:39.12:0,39,516	0/0:9,0:9:27.06:0,27,340	0/0:30,0:30:87.23:0,87,1121	1/1:1,23:24:71.99:859,72,0	1/1:1,27:28:75.22:1020,75,0	1/1:0,9:9:21.07:291,21,0
chr10	15194814	.	GTTT	G	2041.89	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-1.393;DP=520;FS=3.238;HRun=9;HaplotypeScore=121.3267;InbreedingCoeff=0.9811;MQ=72.17;MQ0=1;MQRankSum=-4.197;QD=33.47;ReadPosRankSum=0.459;VQSLOD=2.6747;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:32:90.29:0,90,1807	0/0:10,0:10:17.03:0,17,159	0/0:13,0:11:12.04:0,12,225	0/0:14,0:12:20.85:0,21,343	1/1:1,31:32:84.20:1166,84,0	1/1:0,10:10:24.08:337,24,0	1/1:3,16:19:48.15:681,48,0	0/0:30,0:31:36.47:0,36,460	0/0:10,0:10:26.71:0,27,185	0/0:20,0:20:56.53:0,57,427	0/0:20,0:20:47.35:0,47,376	0/0:11,0:11:33.11:0,33,698	0/0:18,0:18:51.18:0,51,1073	0/0:20,0:20:54.19:0,54,1145	0/0:9,0:9:25.64:0,26,476	0/0:15,0:15:42.13:0,42,773	0/0:27,0:27:71.36:0,71,505	0/0:27,0:27:78.13:0,78,1418	0/0:10,0:18:39.13:0,39,634	0/0:2,0:20:57.19:0,57,814	0/0:2,0:8:24:0,24,342	0/0:17,0:17:48.16:0,48,977	0/0:13,0:13:39.13:0,39,820	0/0:9,0:9:27.09:0,27,571	0/0:30,0:30:87.28:0,87,1749	0/0:25,0:25:55.48:0,55,410	0/0:28,0:28:71.44:0,71,513	0/0:13,0:13:32.80:0,33,249
chr10	15195370	.	A	AATT	5080.10	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=14.172;DP=621;FS=3.987;HRun=0;HaplotypeScore=135.5793;InbreedingCoeff=0.9590;MQ=76.80;MQ0=0;MQRankSum=-13.711;QD=63.50;ReadPosRankSum=2.731;VQSLOD=6.1239;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,120,2204	1/1:0,2:2:6.02:130,6,0	0/0:20,0:20:42.10:0,42,646	0/0:12,0:12:24.06:0,24,376	0/0:27,0:27:81.26:0,81,1479	0/0:30,0:30:90.31:0,90,1671	0/0:37,0:37:99:0,108,1925	1/1:1,1:2:6.02:105,6,0	1/1:0,16:16:48.16:1068,48,0	1/1:0,5:6:18.06:369,18,0	1/1:2,3:5:12.03:221,12,0	0/0:33,0:33:99:0,99,1839	0/0:23,0:23:69.24:0,69,1280	0/0:29,0:29:87.27:0,87,1555	0/0:26,0:26:78.27:0,78,1454	0/0:41,0:41:99:0,123,2293	1/1:1,15:16:48.16:1028,48,0	0/0:32,0:32:96.28:0,96,1707	0/0:22,0:22:66.22:0,66,1199	0/0:15,0:15:45.15:0,45,839	0/0:53,0:53:99:0,156,2759	0/0:23,0:23:63.21:0,63,1145	0/0:22,0:22:63.20:0,63,1143	0/0:35,0:35:99:0,105,1870	0/0:21,0:21:63.22:0,63,1172	1/1:0,12:13:39.13:835,39,0	1/1:0,14:14:42.14:933,42,0	1/1:0,6:6:18.06:390,18,0
chr10	15195373	.	C	CGAA	2228.61	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=14.175;DP=612;FS=2.652;HRun=0;HaplotypeScore=143.2863;InbreedingCoeff=0.9431;MQ=77.67;MQ0=0;MQRankSum=-13.880;QD=29.32;ReadPosRankSum=4.420;VQSLOD=3.6243;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,120,2234	1/1:0,2:2:6.01:62,6,0	0/0:18,0:18:53.96:0,54,814	0/0:15,0:15:24.36:0,24,457	0/0:26,0:26:78.22:0,78,1359	0/0:30,0:30:90.28:0,90,1613	0/0:39,0:39:99:0,117,2071	1/1:0,1:1:3.01:32,3,0	1/1:0,16:16:48.11:506,48,0	1/1:1,5:6:17.77:176,18,0	1/1:0,3:3:9.01:88,9,0	0/0:32,0:32:96.33:0,96,1790	0/0:23,0:23:66.23:0,66,1231	0/0:29,0:29:87.27:0,87,1551	0/0:25,0:25:75.26:0,75,1398	0/0:42,0:42:99:0,123,2285	1/1:0,15:15:45.04:468,45,0	0/0:31,0:31:87.30:0,87,1621	0/0:21,0:21:63.22:0,63,1174	0/0:16,0:16:48.16:0,48,886	0/0:51,0:51:99:0,144,2651	0/0:24,0:24:69.24:0,69,1272	0/0:21,0:21:63.22:0,63,1163	0/0:31,0:31:93.30:0,93,1702	0/0:21,0:21:63.22:0,63,1171	1/1:1,12:13:38.30:395,38,0	1/1:0,13:14:42.10:471,42,0	1/1:0,6:6:18.06:235,18,0
chr10	15195375	.	TTTC	T	780.05	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=13.919;DP=618;FS=2.090;HRun=0;HaplotypeScore=149.0659;InbreedingCoeff=0.9359;MQ=77.59;MQ0=0;MQRankSum=-13.757;QD=10.26;ReadPosRankSum=5.367;VQSLOD=3.3800;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,129,3141	1/1:0,2:2:5.52:25,6,0	0/0:17,0:17:51.18:0,51,1211	0/0:17,0:17:39.11:0,39,857	0/0:24,0:24:72.25:0,72,1774	0/0:31,0:31:93.30:0,93,2169	0/0:41,0:41:99:0,123,2982	1/1:0,1:1:2.84:14,3,0	1/1:0,16:16:44:206,44,0	1/1:1,5:6:14.04:71,14,0	1/1:0,3:3:7.37:31,7,0	0/0:32,0:32:96.33:0,96,2338	0/0:23,0:23:69.24:0,69,1652	0/0:30,0:30:90.31:0,90,2181	0/0:25,0:25:75.26:0,75,1826	0/0:42,0:42:99:0,126,3070	1/1:0,15:15:38.33:177,38,0	0/0:30,0:30:90.31:0,90,2181	0/0:22,0:22:66.23:0,66,1578	0/0:17,0:17:51.17:0,51,1214	0/0:50,0:50:99:0,151,3618	0/0:25,0:25:75.26:0,75,1781	0/0:21,0:21:63.17:0,63,1498	0/0:31,0:31:93.32:0,93,2270	0/0:21,0:21:63.19:0,63,1455	1/1:1,12:13:32.27:160,32,0	1/1:1,13:14:38.95:192,39,0	1/1:0,6:6:17.55:105,18,0
chr10	15195381	.	CAA	C	2817.96	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=14.044;DP=623;FS=2.063;HRun=2;HaplotypeScore=129.0670;InbreedingCoeff=0.9433;MQ=79.18;MQ0=0;MQRankSum=-13.915;QD=37.08;ReadPosRankSum=5.784;VQSLOD=3.8981;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,141,2761	1/1:0,2:2:6.02:80,6,0	0/0:16,0:16:47.53:0,48,912	0/0:18,0:18:50.77:0,51,881	0/0:27,0:27:81.28:0,81,1596	0/0:30,0:30:87.28:0,87,1697	0/0:42,0:42:99:0,126,2515	1/1:0,1:1:3.01:40,3,0	1/1:0,16:16:48.16:670,48,0	1/1:1,5:6:18.03:220,18,0	1/1:0,3:3:9.03:120,9,0	0/0:34,0:34:99:0,102,2073	0/0:21,0:21:63.22:0,63,1280	0/0:32,0:32:96.33:0,96,1923	0/0:23,0:23:69.24:0,69,1402	0/0:43,0:43:99:0,129,2612	1/1:0,15:15:25.20:558,25,0	0/0:32,0:32:96.33:0,96,1950	0/0:23,0:23:66.22:0,66,1300	0/0:18,0:18:48.15:0,48,930	0/0:48,0:48:99:0,144,2876	0/0:24,0:24:72.25:0,72,1452	0/0:21,0:21:60.17:0,60,1145	0/0:30,0:30:90.31:0,90,1829	0/0:18,0:18:51.17:0,51,1025	1/1:1,12:13:39.07:510,39,0	1/1:0,14:14:42.14:584,42,0	1/1:0,6:6:18.06:240,18,0
chr10	15197543	.	TAGGGAGGG	T	685.69	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=0.160;DP=400;FS=8.347;HRun=0;HaplotypeScore=116.6739;InbreedingCoeff=0.2722;MQ=70.55;MQ0=12;MQRankSum=-0.338;QD=6.35;ReadPosRankSum=-1.491;VQSLOD=1.6220;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:33.45:0,33,445	0/0:2,0:2:6.01:0,6,79	0/1:25,0:16:43.75:44,0,91	0/0:30,0:18:13.59:0,14,334	1/1:12,0:11:5.71:113,6,0	0/0:6,8:14:2.94:0,3,18	1/1:19,0:19:36.10:561,36,0	0/1:17,0:13:15.27:15,0,326	0/0:12,0:12:27.08:0,27,516	0/0:11,0:11:27.08:0,27,435	0/0:10,0:10:24.08:0,24,430	0/0:12,0:12:30.08:0,30,519	0/0:8,0:8:21.05:0,21,450	0/0:17,0:17:26.77:0,27,394	0/0:15,0:14:30.09:0,30,498	0/0:16,0:16:29.76:0,30,454	0/0:23,0:23:46.74:0,47,761	0/1:15,0:15:81.59:82,0,249	0/0:12,0:10:14.57:0,15,164	0/0:9,0:9:17.87:0,18,219	0/0:24,0:21:33.48:0,33,494	0/0:11,0:11:18.04:0,18,286	0/1:8,0:8:3.96:4,0,163	0/0:13,0:13:15:0,15,197	0/0:10,0:9:12.01:0,12,156	0/1:12,0:12:2.91:3,0,352	0/0:14,0:14:27.09:0,27,576	0/0:9,0:9:4.22:0,4,263
chr10	15197556	.	AGGGAGG	A	802.70	PASS	AB=0.992;AC=11;AF=0.196;AN=56;BaseQRankSum=1.030;DP=375;FS=0.000;HRun=0;HaplotypeScore=93.1392;InbreedingCoeff=0.0665;MQ=63.45;MQ0=20;MQRankSum=-1.980;QD=6.04;ReadPosRankSum=-0.255;VQSLOD=1.5892;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:17,0:17:55.08:55,0,386	0/0:4,0:4:4.28:0,4,78	0/1:16,0:8:44.54:45,0,91	0/0:24,0:13:14.21:0,14,335	1/1:4,7:10:5.38:105,5,0	0/0:12,0:12:0.06:0,0,57	1/1:17,0:15:5.28:526,5,0	0/1:23,0:18:11.26:11,0,353	0/0:13,0:12:36.11:0,36,596	0/0:12,0:12:6.22:0,6,440	0/0:9,0:9:24.08:0,24,430	0/0:13,0:13:25.38:0,25,491	0/0:12,0:11:27.12:0,27,450	0/0:13,0:13:28.02:0,28,398	0/0:12,0:11:30.09:0,30,498	0/0:15,0:14:11.75:0,12,459	0/0:24,0:24:19.57:0,20,926	0/1:12,0:12:93.51:94,0,246	0/1:13,0:10:21.34:21,0,148	0/0:6,0:6:17.87:0,18,219	0/0:24,0:19:8.88:0,9,443	0/0:6,0:6:18.04:0,18,286	0/1:8,0:8:3.96:4,0,163	0/0:14,0:12:18.34:0,18,214	0/0:9,0:7:14.98:0,15,176	0/1:15,0:15:83.05:83,0,359	0/0:12,0:12:33.11:0,33,586	0/0:8,0:8:3.41:0,3,259
chr10	15197562	.	G	GGA	352.44	PASS	AB=0.961;AC=21;AF=0.477;AN=44;BaseQRankSum=0.434;DP=397;FS=3.303;HRun=0;HaplotypeScore=84.3214;InbreedingCoeff=0.1795;MQ=53.98;MQ0=22;MQRankSum=0.937;QD=1.62;ReadPosRankSum=-0.056;VQSLOD=1.6530;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:18:8.78:99,9,0	0/1:3,0:4:0.55:1,0,21	./.	./.	0/0:12,0:11:2.46:0,2,31	0/1:15,0:15:9.62:10,0,96	0/0:15,0:14:5.99:0,6,53	0/1:25,0:20:0:0,0,0	0/0:13,0:12:12:0,12,117	0/1:13,0:13:36.10:36,0,52	1/1:11,0:11:2.37:8,2,0	0/1:21,0:21:2.31:74,0,2	0/0:15,0:14:2.74:0,3,32	1/1:10,4:14:3.01:44,3,0	1/1:14,0:13:5.42:56,5,0	0/0:12,0:12:5.85:0,6,46	0/0:27,0:26:2.94:0,3,179	1/1:11,0:11:2.55:14,3,0	1/1:12,0:9:5.05:45,5,0	./.	1/1:25,0:20:4.97:30,5,0	./.	./.	0/1:13,7:19:9.39:38,0,9	./.	0/1:14,0:14:28.64:29,0,63	0/0:16,0:16:17.82:0,18,182	0/0:10,0:9:2.93:0,3,32
chr10	15202222	.	A	AACACACACACACACAC	12528.81	PASS	AB=0.632;AC=31;AF=0.596;AN=52;BaseQRankSum=4.102;DP=652;FS=0.448;HRun=0;HaplotypeScore=270.9367;InbreedingCoeff=0.8497;MQ=62.99;MQ0=8;MQRankSum=-10.612;QD=36.00;ReadPosRankSum=-6.209;VQSLOD=2.3619;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:29.06:0,29,1768	1/1:4,0:12:3.48:179,3,0	0/0:38,0:25:42.14:0,42,1368	0/0:27,0:18:29.98:0,30,869	1/1:20,0:21:6.49:138,6,0	1/1:15,0:18:5.99:218,6,0	1/1:11,0:12:14.11:256,14,0	1/1:24,0:20:26.98:551,27,0	1/1:26,0:26:24.06:921,24,0	1/1:26,1:31:54.04:2485,54,0	./.	0/0:34,0:36:83.78:0,84,2805	0/0:34,0:34:80.93:0,81,2956	0/0:28,0:28:57.19:0,57,2441	0/1:15,10:35:0:0,0,0	1/1:11,13:34:7.56:461,8,0	1/1:12,0:12:12.02:394,12,0	1/1:8,6:16:13.29:755,13,0	1/1:17,0:26:39.13:1506,39,0	./.	1/1:12,0:11:9.02:167,9,0	0/0:22,0:22:2.34:0,2,1542	0/0:21,0:21:45.38:0,45,1607	0/0:28,0:28:66.15:0,66,2587	0/0:8,0:10:15:0,15,589	1/1:26,0:23:48.09:2205,48,0	1/1:29,1:31:45.11:2017,45,0	1/1:4,0:4:11.95:275,12,0
chr10	15202238	.	CAG	C	271.91	PASS	AB=0.959;AC=11;AF=0.196;AN=56;BaseQRankSum=-0.275;DP=677;FS=3.297;HRun=0;HaplotypeScore=160.6726;InbreedingCoeff=0.0662;MQ=51.31;MQ0=15;MQRankSum=4.297;QD=1.07;ReadPosRankSum=-0.431;VQSLOD=2.7906;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:2.39:0,2,431	0/0:8,0:8:3.01:0,3,31	0/1:37,0:18:2.53:3,0,16	0/0:33,0:18:10.61:0,11,73	0/0:20,0:20:5.82:0,6,39	0/0:17,0:17:6:0,6,54	0/0:13,0:13:8.95:0,9,99	0/0:30,0:21:28.80:0,29,191	0/0:27,0:25:16.97:0,17,159	0/0:27,0:27:50.73:0,51,391	0/0:17,0:16:2.99:0,3,25	0/0:41,0:41:11.72:0,12,718	0/1:36,0:37:20.80:21,0,533	0/1:28,4:32:39.09:39,0,532	1/1:30,1:30:11.83:78,12,0	1/1:32,0:32:4.08:105,4,0	0/0:14,0:14:9.38:0,9,80	0/1:18,0:18:44.19:44,0,47	0/0:25,0:24:21.27:0,21,154	0/0:12,0:12:8.03:0,8,56	0/0:17,0:14:17.40:0,17,148	0/1:24,0:24:22.41:22,0,253	0/0:23,0:23:11.17:0,11,318	0/1:24,5:29:91.12:91,0,328	0/1:15,0:14:10.85:11,0,132	0/0:32,0:27:49.79:0,50,476	0/0:30,0:31:34.88:0,35,288	0/0:6,0:5:13.26:0,13,133
chr10	15202272	.	G	GCT	4872.97	PASS	AB=0.986;AC=28;AF=0.500;AN=56;BaseQRankSum=2.793;DP=670;FS=14.490;HRun=0;HaplotypeScore=139.1652;InbreedingCoeff=0.7104;MQ=73.67;MQ0=10;MQRankSum=-0.534;QD=16.24;ReadPosRankSum=0.527;VQSLOD=3.8699;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:74.90:0,75,927	1/1:4,1:5:15.05:236,15,0	0/0:42,0:29:59.13:0,59,731	0/0:56,0:27:52.44:0,52,587	1/1:2,18:21:9.03:121,9,0	1/1:1,10:12:6.02:104,6,0	1/1:3,13:17:11.80:211,12,0	1/1:4,24:26:66.16:973,66,0	1/1:2,25:28:17.80:290,18,0	1/1:1,14:15:42.14:685,42,0	1/1:8,3:11:24.06:345,24,0	0/0:33,0:33:93.31:0,93,1299	0/0:28,0:28:72.21:0,72,974	0/0:30,0:30:69.23:0,69,964	0/0:30,0:30:50.89:0,51,690	0/0:29,0:29:65.85:0,66,842	1/1:4,14:18:11.65:192,12,0	0/1:16,1:17:9.47:9,0,495	0/1:15,0:14:2.46:53,0,2	0/1:19,0:19:14.20:49,0,14	0/1:24,0:23:92.05:92,0,105	0/0:17,0:17:48.15:0,48,652	0/0:24,0:24:62.94:0,63,860	0/0:24,0:24:54.08:0,54,751	0/0:23,0:22:45.11:0,45,583	1/1:4,18:21:57.15:922,57,0	1/1:3,32:36:20.77:371,21,0	1/1:0,8:8:12.04:219,12,0
chr10	15202456	.	G	GA	1783.90	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-8.201;DP=715;FS=12.172;HRun=6;HaplotypeScore=71.5252;InbreedingCoeff=0.9998;MQ=76.29;MQ0=0;MQRankSum=-0.120;QD=27.44;ReadPosRankSum=-1.041;VQSLOD=2.9721;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,123,1254	0/0:11,0:11:33:0,33,316	0/0:19,0:19:33.04:0,33,320	0/0:15,0:15:39.07:0,39,386	1/1:0,23:23:63.12:757,63,0	1/1:4,15:19:39.12:491,39,0	1/1:3,20:23:54.17:679,54,0	0/0:27,0:27:66:0,66,647	0/0:19,0:18:51.11:0,51,520	0/0:25,0:25:75.17:0,75,764	0/0:27,0:27:62.07:0,62,571	0/0:29,0:29:81.18:0,81,826	0/0:23,0:23:53.98:0,54,551	0/0:23,0:23:66.15:0,66,673	0/0:29,0:29:84.19:0,84,856	0/0:35,0:35:96.20:0,96,973	0/0:48,0:48:99:0,132,1347	0/0:22,0:22:57.10:0,57,573	0/0:23,0:22:66.14:0,66,667	0/0:20,0:20:60.01:0,60,581	0/0:29,0:29:72.16:0,72,734	0/0:20,0:20:45.10:0,45,459	0/0:26,0:26:72.12:0,72,719	0/0:34,0:33:81.17:0,81,826	0/0:22,0:22:54.11:0,54,544	0/0:29,0:29:75.02:0,75,743	0/0:34,0:34:87.17:0,87,879	0/0:16,0:16:48.11:0,48,488
chr10	15202825	.	GC	G	3915.89	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=8.188;DP=572;FS=19.928;HRun=10;HaplotypeScore=78.5452;InbreedingCoeff=0.8053;MQ=84.80;MQ0=2;MQRankSum=0.626;QD=12.88;ReadPosRankSum=4.877;VQSLOD=1.7590;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:46.29:0,46,665	1/1:1,5:6:12:104,12,0	0/0:53,1:33:11.85:0,12,260	0/0:31,0:19:20.30:0,20,195	0/1:20,0:20:3.99:4,0,284	0/0:18,0:18:38.97:0,39,401	0/0:21,0:21:51.03:0,51,527	1/1:9,14:23:11.71:313,12,0	1/1:1,13:14:29.99:260,30,0	1/1:1,13:14:38.88:319,39,0	1/1:0,15:15:44.77:364,45,0	0/0:16,0:16:33.02:0,33,322	0/0:11,0:11:30.05:0,30,312	0/0:16,0:16:34.28:0,34,354	1/1:15,0:15:14.27:34,14,0	0/1:34,0:34:13.78:39,0,14	1/1:5,23:28:56.98:494,57,0	0/1:13,0:13:5.75:6,0,22	1/1:20,0:20:40.24:217,40,0	1/1:13,0:13:34.26:175,34,0	1/1:23,0:22:45.43:218,45,0	0/0:19,0:19:42.86:0,43,538	0/0:15,0:16:35.79:0,36,362	0/0:18,0:18:48.12:0,48,523	0/0:15,0:15:39.10:0,39,428	1/1:2,15:17:47.19:385,47,0	1/1:3,36:39:95.89:854,96,0	1/1:1,9:10:14.99:130,15,0
chr10	15202834	.	CCA	C	1942.77	PASS	AB=0.981;AC=13;AF=0.232;AN=56;BaseQRankSum=6.098;DP=608;FS=0.000;HRun=0;HaplotypeScore=103.8477;InbreedingCoeff=0.6845;MQ=85.12;MQ0=3;MQRankSum=-1.099;QD=12.70;ReadPosRankSum=4.157;VQSLOD=3.4552;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:85.39:0,85,1244	0/0:6,0:6:13.38:0,13,63	0/0:63,0:35:43.21:0,43,639	0/0:39,0:23:32.84:0,33,347	0/0:16,0:16:42.91:0,43,521	0/0:18,0:18:53.99:0,54,776	0/0:23,0:23:69.14:0,69,1041	0/0:26,0:26:16.21:0,16,336	0/0:19,0:19:40.96:0,41,231	0/1:16,0:16:40.37:40,0,123	0/0:17,0:17:9.59:0,10,135	0/0:17,0:17:51.08:0,51,670	0/0:16,0:16:48.06:0,48,650	0/0:18,0:18:52.60:0,53,685	1/1:20,0:20:26.14:88,26,0	1/1:37,0:37:10.44:150,10,0	0/0:27,0:27:61.12:0,61,289	0/1:14,0:14:10.35:46,0,10	1/1:1,16:17:48.03:597,48,0	1/1:0,12:12:36.03:464,36,0	1/1:1,19:19:51.16:709,51,0	0/0:19,0:19:56.87:0,57,903	0/0:15,0:15:41.89:0,42,622	0/0:17,0:17:51.15:0,51,871	0/0:14,0:14:42.14:0,42,736	0/1:16,1:17:31.62:32,0,106	0/0:42,0:42:99:0,104,481	0/0:11,0:11:18.98:0,19,99
chr10	15202835	.	CA	C	1839.72	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=10.023;DP=606;FS=6.123;HRun=8;HaplotypeScore=93.8035;InbreedingCoeff=0.6690;MQ=84.60;MQ0=3;MQRankSum=-0.921;QD=9.43;ReadPosRankSum=8.200;VQSLOD=0.9624;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:32:77.54:0,78,769	0/0:6,0:6:4.67:0,5,28	0/0:62,0:35:40.56:0,41,346	0/0:38,0:22:15.30:0,15,135	0/0:16,0:16:25.96:0,26,236	0/0:18,0:18:48.09:0,48,517	0/0:22,0:23:65.94:0,66,683	0/0:25,0:25:22.45:0,22,251	0/0:19,0:19:7.52:0,8,113	0/0:16,0:16:11.66:0,12,93	0/1:17,0:17:7.60:8,0,43	0/0:16,0:16:42.07:0,42,440	0/0:16,0:16:42.04:0,42,425	0/0:18,1:19:16.99:0,17,400	1/1:0,19:19:36.04:347,36,0	1/1:4,33:37:74.19:721,74,0	0/0:28,0:28:4.31:0,4,105	1/1:2,12:14:27.04:260,27,0	1/1:16,1:17:40.93:241,41,0	1/1:12,0:12:29.16:164,29,0	1/1:19,0:19:48.26:268,48,0	0/0:19,0:19:30.76:0,31,502	0/0:15,0:15:33.07:0,33,368	0/0:17,0:17:48.13:0,48,548	0/0:14,0:14:42.05:0,42,450	0/1:17,0:17:12.87:13,0,17	0/1:42,0:42:5.46:5,0,99	0/0:11,0:11:1.96:0,2,44
chr10	15206369	.	G	GGT	2983.31	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-12.369;DP=735;FS=0.491;HRun=0;HaplotypeScore=98.9271;InbreedingCoeff=0.9936;MQ=81.33;MQ0=1;MQRankSum=-1.074;QD=36.38;ReadPosRankSum=2.635;VQSLOD=6.0317;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,120,1502	0/0:20,0:20:45.12:0,45,562	0/0:29,0:28:53.82:0,54,615	0/0:30,0:28:56.98:0,57,669	0/0:12,0:12:27.09:0,27,347	0/0:19,0:19:51.15:0,51,641	0/0:27,0:27:78.24:0,78,989	0/0:36,0:36:78.22:0,78,966	0/0:24,0:24:60.19:0,60,772	0/0:27,0:27:57.17:0,57,712	0/0:16,0:16:48.15:0,48,606	0/0:30,0:30:72.19:0,72,908	0/0:28,0:28:72.23:0,72,926	0/0:30,0:30:81.26:0,81,1042	1/1:1,23:24:63.22:1051,63,0	1/1:4,25:29:66.23:1114,66,0	0/0:29,0:29:81.26:0,81,1038	1/1:4,23:28:57.20:962,57,0	0/0:14,0:14:27.09:0,27,346	0/0:23,0:23:60.17:0,60,744	0/0:65,0:65:99:0,187,2348	0/0:17,0:17:45.15:0,45,579	0/0:14,0:14:39.13:0,39,502	0/0:33,0:33:81.26:0,81,1042	0/0:17,0:17:42.13:0,42,528	0/0:30,0:30:75.23:0,75,941	0/0:30,0:30:78.24:0,78,989	0/0:7,0:7:15.05:0,15,193
chr10	15210168	.	GAAGAAAGAAAGA	G	4924.37	PASS	AC=18;AF=0.333;AN=54;BaseQRankSum=-1.722;DP=580;FS=16.056;HRun=0;HaplotypeScore=198.2927;InbreedingCoeff=0.8942;MQ=63.57;MQ0=1;MQRankSum=-9.670;QD=23.12;ReadPosRankSum=-1.008;VQSLOD=2.9558;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:14,19:32:12.04:376,12,0	0/0:8,0:8:21.07:0,21,698	./.	0/0:20,0:14:2.22:0,2,7	0/0:5,0:22:52.73:0,53,1263	1/1:5,0:21:16.07:39,16,0	1/1:8,0:17:1.55:4,2,0	0/0:20,0:20:18.06:0,18,351	0/0:21,0:21:33.11:0,33,869	0/0:18,0:18:42.14:0,42,2172	0/0:19,0:19:39.13:0,39,1784	1/1:8,15:23:27.09:930,27,0	1/1:11,20:31:24.08:827,24,0	1/1:12,8:20:15.05:517,15,0	0/0:8,0:25:21.07:0,21,993	0/0:11,0:19:27.02:0,27,952	0/0:35,0:35:45.15:0,45,1435	0/0:11,0:33:30.10:0,30,1463	0/0:20,0:20:15.02:0,15,323	0/0:7,0:18:36.11:0,36,1438	0/0:3,0:10:12.04:0,12,618	1/1:9,12:21:30.10:929,30,0	1/1:6,10:16:12.96:437,13,0	0/0:8,6:14:0.47:0,0,1	1/1:15,15:30:30.10:866,30,0	0/0:22,0:22:36.12:0,36,1455	0/0:20,0:20:33.11:0,33,774	0/0:7,0:7:18.06:0,18,772
chr10	15210214	.	A	AG	427.91	PASS	AB=0.836;AC=7;AF=0.125;AN=56;BaseQRankSum=7.370;DP=677;FS=9.708;HRun=0;HaplotypeScore=127.5113;InbreedingCoeff=-0.1339;MQ=57.78;MQ0=9;MQRankSum=-2.780;QD=2.69;ReadPosRankSum=0.666;VQSLOD=2.0668;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:25.15:0,25,412	0/1:5,3:8:20.63:45,0,21	0/1:46,0:16:1.87:2,0,178	0/0:55,0:15:16.97:0,17,209	0/0:25,0:25:62.40:0,62,587	0/0:22,0:22:44.92:0,45,419	0/0:17,0:17:27.06:0,27,343	0/0:41,0:41:73.83:0,74,512	0/1:12,2:14:33.92:81,0,34	0/0:32,1:33:57.06:0,57,293	0/1:10,10:20:68.27:188,0,68	0/0:24,0:24:49.43:0,49,508	0/0:30,0:30:53.33:0,53,565	0/0:14,0:14:32.95:0,33,359	0/0:27,0:27:27.15:0,27,414	0/0:17,0:17:27.48:0,27,384	0/1:16,6:21:99:136,0,112	0/0:38,0:38:43.50:0,44,656	0/0:18,0:18:54.15:0,54,694	0/0:17,0:17:26.20:0,26,359	0/0:10,0:10:12.98:0,13,206	0/0:21,0:21:44.10:0,44,561	0/0:19,0:19:42.03:0,42,481	0/0:10,0:10:15.05:0,15,209	0/0:23,0:23:54.02:0,54,635	0/1:20,4:24:52.60:53,0,135	0/1:23,1:24:48.62:49,0,193	0/0:26,3:29:17.18:0,17,292
chr10	15210215	.	A	AAAG	1520.39	PASS	AB=0.850;AC=8;AF=0.143;AN=56;BaseQRankSum=3.354;DP=684;FS=1.689;HRun=0;HaplotypeScore=143.6590;InbreedingCoeff=-0.1568;MQ=57.67;MQ0=9;MQRankSum=-1.861;QD=8.17;ReadPosRankSum=0.202;VQSLOD=3.2806;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:37.32:0,37,547	0/1:5,0:8:13.91:177,0,14	0/0:49,0:17:25.62:0,26,293	0/0:55,0:15:25.06:0,25,310	0/0:23,0:23:66.16:0,66,1002	0/0:22,0:22:45.14:0,45,680	0/0:17,0:17:27.08:0,27,426	0/1:42,0:42:15.47:15,0,504	0/1:12,0:14:43.37:181,0,43	0/0:32,1:33:40.55:0,41,468	0/1:11,10:21:99:425,0,116	0/0:24,0:24:54.15:0,54,779	0/0:30,0:30:54.17:0,54,834	0/0:14,0:14:33.11:0,33,530	0/0:27,0:27:42.12:0,42,556	0/0:17,0:17:37.55:0,38,478	0/1:17,6:22:99:353,0,155	0/0:38,0:38:58.71:0,59,830	0/0:18,0:18:54.14:0,54,811	0/0:17,0:17:34.25:0,34,450	0/0:11,0:11:20.04:0,20,263	0/0:21,0:21:55.72:0,56,831	0/0:19,0:19:45.10:0,45,642	0/0:10,0:10:15.05:0,15,254	0/0:24,0:24:54.18:0,54,880	0/1:21,1:25:99:273,0,108	0/1:23,0:24:99:173,0,217	0/1:26,1:29:58.80:59,0,355
chr10	15211666	.	A	AC	358.38	PASS	AC=14;AF=0.292;AN=48;BaseQRankSum=-2.946;DP=129;FS=5.282;HRun=7;HaplotypeScore=14.5045;InbreedingCoeff=0.7049;MQ=85.28;MQ0=0;MQRankSum=-0.310;QD=13.27;ReadPosRankSum=1.170;VQSLOD=0.8874;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:26.99:0,27,241	./.	0/0:5,0:5:12.02:0,12,116	0/0:3,0:3:6:0,6,53	./.	0/0:1,0:1:3:0,3,29	0/0:11,0:11:30.05:0,30,289	1/1:3,0:3:2.97:20,3,0	1/1:1,4:5:9.50:109,9,0	1/1:0,3:3:9.03:108,9,0	./.	0/0:5,0:5:12.02:0,12,116	0/0:4,0:4:12.02:0,12,116	0/0:6,0:6:12.02:0,12,116	0/0:7,0:7:15.02:0,15,145	0/0:10,0:10:30.05:0,30,290	1/1:1,5:6:6.02:72,6,0	0/0:3,0:3:9.01:0,9,87	0/0:6,0:6:18.01:0,18,167	0/0:1,0:1:3:0,3,29	0/0:13,0:13:33.02:0,33,307	0/0:6,0:6:18.03:0,18,173	./.	0/0:7,0:7:12.01:0,12,116	0/0:2,0:2:5.99:0,6,51	1/1:1,2:3:5.76:72,6,0	1/1:1,4:5:9.03:109,9,0	1/1:2,0:2:2.98:22,3,0
chr10	15213418	.	C	CCT	6777.18	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=12.008;DP=760;FS=13.755;HRun=0;HaplotypeScore=180.8674;InbreedingCoeff=0.9955;MQ=68.23;MQ0=1;MQRankSum=-13.838;QD=33.55;ReadPosRankSum=-1.524;VQSLOD=5.0500;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,150,1916	1/1:2,10:12:27.05:429,27,0	0/0:30,0:26:42.51:0,43,527	0/0:32,0:32:14.62:0,15,635	0/0:24,0:24:45.67:0,46,575	0/0:22,0:22:36.11:0,36,469	0/0:33,0:33:72.21:0,72,938	1/1:17,19:36:69.14:1027,69,0	1/1:6,15:21:54.12:832,54,0	1/1:13,12:25:65.85:819,66,0	1/1:9,4:13:17.68:245,18,0	0/0:31,0:31:84.25:0,84,1099	0/0:28,0:28:72.17:0,72,905	0/0:35,0:35:99:0,102,1320	0/0:35,0:35:90.28:0,90,1186	0/0:38,0:38:90.24:0,90,1172	1/1:8,23:31:60.28:891,60,0	0/0:17,0:17:39.02:0,39,481	0/0:19,0:19:56.73:0,57,661	0/0:14,0:14:27.09:0,27,355	0/0:45,0:45:96.10:0,96,1142	0/0:28,0:28:70.76:0,71,920	0/0:20,0:20:50.87:0,51,643	0/0:34,0:34:96.28:0,96,1245	0/0:18,0:18:48.16:0,48,644	1/1:10,19:29:72.16:1111,72,0	1/1:3,18:21:56.22:918,56,0	1/1:5,9:14:38.98:506,39,0
chr10	15213443	.	G	GTGTC	24815.57	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-3.423;DP=812;FS=3.721;HRun=0;HaplotypeScore=167.6045;InbreedingCoeff=0.9990;MQ=70.94;MQ0=0;MQRankSum=-10.376;QD=52.02;ReadPosRankSum=1.064;VQSLOD=5.8688;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:57:99:0,165,2981	1/1:1,10:11:24.08:601,24,0	0/0:43,0:37:82.28:0,82,1368	0/0:40,0:36:59.95:0,60,922	1/1:3,23:26:41.72:1048,42,0	1/1:1,21:22:36.12:925,36,0	1/1:2,39:41:69.24:1709,69,0	1/1:4,27:33:93.26:2028,93,0	1/1:2,17:21:48.15:1130,48,0	1/1:2,22:27:81.23:1849,81,0	1/1:0,10:10:21.54:434,22,0	0/0:33,0:33:93.31:0,93,1716	0/0:26,0:26:78.25:0,78,1447	0/0:27,0:27:78.26:0,78,1442	1/1:4,29:34:72.25:1863,72,0	1/1:1,38:41:90.31:2395,90,0	1/1:3,26:31:51.17:1223,51,0	1/1:1,20:21:48.16:1248,48,0	1/1:4,14:18:45.15:1113,45,0	1/1:0,16:17:36.12:880,36,0	1/1:4,41:47:71.96:1917,72,0	0/0:26,0:26:75.14:0,75,1286	0/0:18,0:17:54.18:0,54,978	0/0:43,0:43:99:0,123,2224	0/0:22,0:22:63.17:0,63,1131	1/1:5,29:34:93.26:2305,93,0	1/1:3,26:30:63.22:1502,63,0	1/1:4,8:13:27.07:645,27,0
chr10	15214598	.	GA	G	3951.86	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=5.925;DP=596;FS=1.109;HRun=11;HaplotypeScore=66.3717;InbreedingCoeff=0.9399;MQ=66.72;MQ0=3;MQRankSum=-1.032;QD=19.47;ReadPosRankSum=1.996;VQSLOD=4.7730;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,3:32:19.88:0,20,621	1/1:2,5:7:14.98:123,15,0	0/0:30,1:23:1.86:0,2,293	0/0:12,0:9:3.56:0,4,58	0/0:6,1:21:27.30:0,27,277	0/0:5,0:18:40.29:0,40,240	0/0:6,0:22:45.97:0,46,272	1/1:3,21:24:59.90:490,60,0	1/1:1,10:11:26.97:222,27,0	1/1:5,26:31:77.88:637,78,0	1/1:1,21:22:49.78:437,50,0	0/0:15,0:15:42.10:0,42,446	0/0:21,0:21:50.70:0,51,513	0/0:13,0:14:27.79:0,28,327	0/0:12,0:12:33.08:0,33,351	0/0:21,0:21:57.14:0,57,607	1/1:5,32:37:51.59:588,52,0	0/0:21,1:23:38.35:0,38,596	0/0:20,0:21:37.58:0,38,491	0/0:20,0:21:53.97:0,54,554	0/0:16,0:16:42.11:0,42,447	0/0:19,0:19:32.77:0,33,507	0/0:20,0:20:48.11:0,48,503	0/0:19,0:19:42.97:0,43,450	0/0:33,1:34:59.53:0,60,823	1/1:4,21:25:62.91:517,63,0	1/1:3,24:27:62.92:517,63,0	1/1:2,17:19:51.81:421,52,0
chr10	15215894	.	G	GGTGT	2242.12	PASS	AB=0.920;AC=41;AF=0.820;AN=50;BaseQRankSum=0.892;DP=570;FS=16.760;HRun=0;HaplotypeScore=115.7940;InbreedingCoeff=-0.0275;MQ=66.51;MQ0=12;MQRankSum=-0.878;QD=4.81;ReadPosRankSum=-2.521;VQSLOD=0.8883;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:32:9.97:30,0,10	0/1:9,0:9:0:0,0,0	./.	./.	1/1:18,0:18:12.01:155,12,0	0/1:23,0:23:33.21:100,0,33	0/1:26,0:26:37.99:47,0,38	./.	1/1:18,0:18:3.41:65,3,0	1/1:17,0:16:13.27:136,13,0	1/1:5,0:5:5.61:74,6,0	1/1:17,0:21:2.84:14,3,0	0/1:16,0:20:6.62:7,0,77	0/1:19,0:18:4.64:230,0,5	1/1:13,0:11:6.02:112,6,0	1/1:14,0:14:11.56:230,12,0	1/1:33,0:32:23.33:283,23,0	1/1:19,0:19:17.65:233,18,0	0/0:16,0:14:2.83:0,3,14	1/1:8,0:8:2.32:12,2,0	1/1:49,0:49:0.04:6,0,0	1/1:12,0:12:3:25,3,0	1/1:8,0:7:6.01:89,6,0	0/1:25,6:33:99:113,0,113	1/1:15,0:14:5.75:72,6,0	1/1:25,0:24:10.39:183,10,0	1/1:17,0:17:6.47:83,6,0	1/1:10,0:10:6.01:67,6,0
chr10	15216658	.	C	CA	7577.52	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-15.315;DP=783;FS=3.199;HRun=1;HaplotypeScore=71.9363;InbreedingCoeff=0.9993;MQ=81.38;MQ0=0;MQRankSum=-0.953;QD=40.74;ReadPosRankSum=-0.099;VQSLOD=5.3302;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:59,0:59:99:0,175,2229	0/0:8,0:8:24.08:0,24,311	0/0:23,0:22:55.86:0,56,758	0/0:22,0:21:57.12:0,57,697	0/0:25,0:25:72.20:0,72,907	0/0:21,0:21:60.18:0,60,765	0/0:33,0:33:93.29:0,93,1194	0/0:23,0:23:69.22:0,69,884	0/0:23,0:23:63.19:0,63,803	0/0:25,0:25:66.21:0,66,857	0/0:18,0:18:48.16:0,48,623	0/0:35,0:35:99:0,99,1285	0/0:35,0:35:99:0,102,1292	0/0:35,0:35:99:0,99,1283	1/1:2,40:42:99:1529,102,0	1/1:1,28:29:78.26:1169,78,0	0/0:50,0:50:99:0,144,1869	1/1:0,33:33:93.32:1394,93,0	1/1:1,19:20:57.18:833,57,0	1/1:0,15:15:42.14:629,42,0	1/1:0,47:47:99:2024,135,0	0/0:20,0:20:54.18:0,54,701	0/0:9,0:9:27.09:0,27,351	0/0:38,0:37:99:0,111,1441	0/0:21,0:21:63.20:0,63,818	0/0:34,0:34:99:0,102,1325	0/0:28,0:27:78.25:0,78,1012	0/0:12,0:12:36.12:0,36,467
chr10	15216974	.	C	CT	988.85	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-3.549;DP=643;FS=13.091;HRun=8;HaplotypeScore=78.8754;InbreedingCoeff=0.9312;MQ=71.30;MQ0=1;MQRankSum=1.573;QD=15.21;ReadPosRankSum=-3.313;VQSLOD=1.6978;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:71.92:0,72,644	0/0:13,0:13:17.94:0,18,155	0/0:37,0:20:21.43:0,21,263	0/0:31,0:17:17.89:0,18,147	0/0:25,0:25:59.86:0,60,526	0/0:20,0:20:47.87:0,48,411	0/0:24,0:24:59.83:0,60,505	0/0:17,0:20:4.29:0,4,159	0/0:25,0:25:62.78:0,63,538	0/0:30,0:30:77.50:0,78,642	0/0:15,0:15:36.77:0,37,305	0/0:19,0:19:35.87:0,36,309	0/0:32,0:32:71.92:0,72,631	0/0:15,0:15:35.89:0,36,302	0/0:32,0:32:68.84:0,69,595	0/0:24,0:24:50.90:0,51,439	0/0:16,0:16:35.88:0,36,309	0/0:15,0:15:41.99:0,42,375	1/1:11,7:19:46.15:448,46,0	1/1:4,17:21:11.35:272,11,0	1/1:3,22:25:36.10:407,36,0	0/0:25,0:25:53.64:0,54,438	0/0:18,0:18:32.84:0,33,285	0/0:16,0:16:29.49:0,29,269	0/0:19,0:19:41.93:0,42,365	0/0:29,0:29:65.66:0,66,562	0/0:29,0:29:59.81:0,60,519	0/0:15,0:15:38.99:0,39,351
chr10	15218814	.	TG	T	3051.15	PASS	AB=0.892;AC=27;AF=0.482;AN=56;BaseQRankSum=10.187;DP=466;FS=0.820;HRun=10;HaplotypeScore=79.4161;InbreedingCoeff=0.7662;MQ=72.34;MQ0=3;MQRankSum=-0.339;QD=14.74;ReadPosRankSum=1.762;VQSLOD=4.0492;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:10,2:14:10.66:11,0,140	1/1:0,1:1:3:26,3,0	0/0:9,0:9:17.99:0,18,182	0/0:18,0:17:32.83:0,33,319	1/1:0,5:5:15:130,15,0	1/1:1,20:22:53:447,53,0	1/1:1,16:17:29.89:250,30,0	1/1:4,11:15:32.61:269,33,0	1/1:3,14:16:35.87:302,36,0	1/1:4,6:8:20.99:179,21,0	1/1:1,6:7:14.99:130,15,0	0/0:31,1:32:62.03:0,62,861	0/0:20,1:21:25.09:0,25,504	0/1:11,2:13:18.99:19,0,247	0/0:15,0:15:38.35:0,38,251	0/0:12,0:12:30.71:0,31,186	1/1:6,33:38:92.84:799,93,0	0/0:31,0:31:83.03:0,83,512	0/0:17,0:17:34.88:0,35,205	0/0:7,0:7:8.87:0,9,58	0/0:55,0:55:99:0,123,762	0/0:6,0:6:9.02:0,9,99	0/0:7,0:7:14.90:0,15,139	0/0:28,0:28:63.13:0,63,666	0/1:13,1:14:1.90:2,0,186	1/1:0,16:16:44.99:391,45,0	1/1:2,9:10:23.97:208,24,0	1/1:0,5:5:12:104,12,0
chr10	15221037	.	C	CGT	4509.99	PASS	AB=0.753;AC=46;AF=0.852;AN=54;BaseQRankSum=0.579;DP=712;FS=18.174;HRun=0;HaplotypeScore=162.7997;InbreedingCoeff=-0.0036;MQ=61.98;MQ0=5;MQRankSum=-0.435;QD=6.73;ReadPosRankSum=-2.631;VQSLOD=2.6866;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:18,10:28:41.69:249,0,42	1/1:8,0:8:2.99:23,3,0	0/0:25,0:18:2.95:0,3,19	./.	0/1:13,0:16:0:0,0,0	1/1:25,0:26:8.91:64,9,0	1/1:46,0:46:3.48:44,3,0	1/1:29,0:28:18.66:143,19,0	1/1:31,0:31:12.01:125,12,0	1/1:30,0:29:29.26:249,29,0	1/1:9,0:9:3:27,3,0	0/1:22,17:40:8.54:448,0,9	0/1:18,9:27:45.94:200,0,46	0/1:27,7:34:85.63:463,0,86	1/1:13,2:25:17.75:181,18,0	1/1:22,1:30:5.87:41,6,0	1/1:30,0:30:9.93:61,10,0	1/1:13,0:20:6.05:81,6,0	1/1:17,0:17:3.46:25,3,0	1/1:9,0:9:2.97:27,3,0	1/1:42,0:41:13.04:188,13,0	0/1:8,8:16:24.86:79,0,25	1/1:9,10:21:3.92:214,4,0	1/1:22,18:41:23.67:776,24,0	1/1:16,11:26:18.06:272,18,0	1/1:31,0:34:35:283,35,0	1/1:17,1:22:26.51:192,27,0	1/1:9,0:9:5.93:56,6,0
chr10	15221061	.	T	TGTGTGTGTGTGTGT	8099.92	PASS	AB=1.000;AC=33;AF=0.635;AN=52;BaseQRankSum=-3.358;DP=636;FS=4.406;HRun=0;HaplotypeScore=243.8621;InbreedingCoeff=0.5201;MQ=52.59;MQ0=8;MQRankSum=-5.180;QD=19.47;ReadPosRankSum=-3.080;VQSLOD=3.3419;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:24.04:0,24,533	./.	0/0:22,0:14:3.01:0,3,102	./.	0/0:15,0:15:0.01:0,0,0	1/1:24,0:24:4.95:398,5,0	1/1:40,0:40:14.82:647,15,0	1/1:22,0:20:26.53:764,27,0	1/1:21,0:21:19.28:685,19,0	1/1:24,0:23:35.79:1031,36,0	1/1:7,0:7:1.44:91,1,0	0/0:41,0:41:39.39:0,39,770	0/1:24,0:24:80.03:80,0,499	0/0:30,0:29:3.12:0,3,846	0/1:25,0:25:60.63:204,0,61	1/1:25,0:25:11.16:375,11,0	1/1:26,0:26:29.26:1187,29,0	1/1:19,0:19:16.75:298,17,0	1/1:13,0:12:8.52:233,9,0	1/1:7,0:7:2.86:70,3,0	1/1:39,0:38:7.24:202,7,0	0/0:17,0:17:11.16:0,11,204	0/0:18,0:18:19.31:0,19,350	0/1:41,0:41:99:200,0,1017	0/0:17,0:16:18.06:0,18,300	1/1:32,0:30:38.31:909,38,0	1/1:18,0:18:9.03:409,9,0	1/1:4,3:9:6.91:317,7,0
chr10	15227057	.	TA	T	2146.86	PASS	AB=1.000;AC=22;AF=0.393;AN=56;BaseQRankSum=19.833;DP=728;FS=9.049;HRun=1;HaplotypeScore=91.5925;InbreedingCoeff=0.8448;MQ=86.82;MQ0=0;MQRankSum=-7.556;QD=7.92;ReadPosRankSum=1.457;VQSLOD=0.3548;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,162,2464	1/1:10,2:12:5.19:104,5,0	0/0:27,0:27:77.30:0,77,1101	0/0:20,1:21:31.82:0,32,829	0/1:25,0:25:2.42:250,0,2	1/1:20,0:20:7.45:181,7,0	1/1:28,0:28:59.93:262,60,0	0/1:33,0:33:36.99:153,0,37	1/1:21,0:21:49.79:228,50,0	1/1:26,1:27:19.61:245,20,0	1/1:16,0:16:16.91:173,17,0	0/0:35,0:35:99:0,105,1598	0/0:20,0:20:60.16:0,60,907	0/0:23,0:23:69.20:0,69,1044	0/0:26,0:26:75.21:0,75,1104	0/0:25,0:25:59.93:0,60,1036	1/1:37,0:37:18.53:281,19,0	0/0:20,0:20:57.19:0,57,901	0/0:22,0:22:66.18:0,66,1014	0/0:18,0:18:54.15:0,54,802	0/0:68,0:68:99:0,202,3087	0/0:20,0:20:57.18:0,57,884	0/0:20,0:20:60.18:0,60,898	0/0:43,0:43:99:0,129,2030	0/0:15,0:15:45.13:0,45,674	1/1:23,0:23:46.64:176,47,0	1/1:20,0:20:28.09:193,28,0	1/1:9,0:9:24.88:113,25,0
chr10	15227058	.	AC	A	8270.75	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=15.411;DP=723;FS=11.270;HRun=4;HaplotypeScore=71.1678;InbreedingCoeff=0.9996;MQ=86.49;MQ0=0;MQRankSum=-1.767;QD=30.86;ReadPosRankSum=-0.371;VQSLOD=4.2511;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,156,2141	1/1:3,9:12:24.07:286,24,0	0/0:27,0:27:73.77:0,74,959	0/0:20,0:20:50.31:0,50,758	1/1:2,22:24:66.20:790,66,0	1/1:1,18:19:54.17:648,54,0	1/1:0,28:28:66.20:792,66,0	1/1:4,29:33:81.21:937,81,0	1/1:0,21:21:54.17:648,54,0	1/1:3,24:27:75.23:896,75,0	1/1:2,14:16:42.13:503,42,0	0/0:35,0:35:99:0,102,1427	0/0:20,0:20:57.19:0,57,796	0/0:22,0:22:63.21:0,63,882	0/0:25,0:25:72.23:0,72,991	0/0:28,1:29:42.22:0,42,952	1/1:2,34:36:87.27:1044,87,0	0/0:20,0:20:57.19:0,57,798	0/0:22,0:22:63.21:0,63,882	0/0:17,0:17:51.17:0,51,713	0/0:68,0:68:99:0,193,2666	0/0:20,0:20:57.17:0,57,778	0/0:19,0:19:57.19:0,57,797	0/0:43,0:43:99:0,129,1805	0/0:15,0:15:39.13:0,39,546	1/1:0,23:23:65.90:756,66,0	1/1:1,19:20:54.17:648,54,0	1/1:0,9:9:27.08:324,27,0
chr10	15228700	.	CTCTTCATT	C	7215.39	PASS	AB=0.930;AC=23;AF=0.411;AN=56;BaseQRankSum=10.777;DP=562;FS=11.227;HRun=0;HaplotypeScore=162.9910;InbreedingCoeff=0.4696;MQ=61.22;MQ0=0;MQRankSum=-1.072;QD=25.32;ReadPosRankSum=-2.553;VQSLOD=3.5726;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:25:11.17:11,0,762	1/1:4,0:4:12.04:197,12,0	0/0:9,0:5:15.04:0,15,251	0/0:7,0:7:14.81:0,15,304	0/0:30,0:30:81.27:0,81,1258	0/0:26,0:26:72.24:0,72,1061	0/0:24,0:24:63.21:0,63,1125	1/1:0,27:27:81.28:1376,81,0	0/1:1,23:24:90.81:730,0,91	1/1:0,26:26:78.27:1589,78,0	1/1:0,18:18:48.15:906,48,0	0/0:14,0:14:19.65:0,20,568	0/1:14,0:14:22.11:22,0,431	0/1:23,0:23:10.76:11,0,746	0/0:38,0:38:99:0,102,2739	0/0:26,0:26:75.26:0,75,2014	1/1:0,18:18:6.02:128,6,0	0/0:29,0:29:81.26:0,81,2072	0/0:23,0:23:21.34:0,21,954	0/0:19,0:19:16.56:0,17,706	0/0:15,0:15:29.45:0,29,472	0/1:21,0:21:99:191,0,312	0/1:20,0:20:37.65:38,0,584	0/0:17,0:17:20.64:0,21,536	0/1:13,0:13:4.22:4,0,462	1/1:0,22:22:66.23:1408,66,0	1/1:0,25:25:11.89:330,12,0	1/1:0,5:5:9.03:272,9,0
chr10	15228702	.	CTTCATTCATTCA	C	3836.26	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-4.094;DP=559;FS=2.290;HRun=0;HaplotypeScore=214.9758;InbreedingCoeff=0.7421;MQ=60.35;MQ0=0;MQRankSum=-7.203;QD=19.18;ReadPosRankSum=-2.774;VQSLOD=2.1251;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:19,6:25:12.04:411,12,0	0/0:4,0:4:0:0,0,0	0/0:8,0:4:3.01:0,3,34	0/0:7,0:7:0.31:0,0,34	0/0:15,0:30:48.16:0,48,1214	0/0:12,0:26:39.13:0,39,1012	0/0:17,0:24:24.05:0,24,609	0/0:27,0:27:6.01:0,6,68	0/0:23,0:24:29.28:0,29,322	0/0:26,0:26:30.29:0,30,290	0/0:18,0:18:29.68:0,30,251	1/1:11,3:14:3.01:103,3,0	1/1:10,4:14:9.03:309,9,0	1/1:18,3:21:12.04:412,12,0	0/0:22,0:40:54.19:0,54,2491	0/0:19,0:28:44.70:0,45,2002	0/0:18,0:18:2.88:0,3,15	0/0:16,0:27:42.14:0,42,1826	1/1:18,0:22:9.92:254,10,0	1/1:11,0:19:6.02:165,6,0	1/1:10,0:14:3.01:68,3,0	1/1:8,13:21:36.12:1233,36,0	1/1:14,6:20:15.05:505,15,0	1/1:14,2:16:5.95:172,6,0	1/1:10,3:13:6.02:205,6,0	0/0:22,0:22:32.77:0,33,314	0/0:25,0:25:11.82:0,12,76	0/0:5,0:5:8.87:0,9,56
chr10	15229376	.	CA	C	7439.70	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=13.068;DP=782;FS=0.302;HRun=4;HaplotypeScore=86.6827;InbreedingCoeff=0.9755;MQ=60.98;MQ0=2;MQRankSum=-0.805;QD=31.00;ReadPosRankSum=0.881;VQSLOD=5.0036;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:93.25:0,93,1259	1/1:2,9:11:27.06:308,27,0	0/0:26,0:18:47.17:0,47,587	0/0:22,0:16:45.78:0,46,538	0/0:29,0:29:25.76:0,26,211	0/0:22,0:22:5.65:0,6,274	0/0:21,0:21:12.51:0,13,170	1/1:0,23:23:69.21:824,69,0	1/1:4,20:24:57.17:684,57,0	1/1:2,31:32:84.25:1002,84,0	1/1:0,22:22:60.18:716,60,0	0/0:37,0:37:99:0,111,1488	0/0:42,0:42:99:0,117,1632	0/0:38,0:38:99:0,108,1474	0/0:36,0:36:99:0,105,1449	0/0:30,0:30:80.40:0,80,1109	1/1:7,38:45:87.09:1172,87,0	0/0:22,0:22:66.22:0,66,922	0/0:24,0:23:66.17:0,66,880	0/0:31,0:31:78.26:0,78,1079	0/0:5,0:5:15.05:0,15,208	0/0:22,0:22:66.19:0,66,870	0/0:31,0:31:90.30:0,90,1258	0/0:37,1:38:99:0,108,1508	0/0:33,0:33:90.28:0,90,1225	1/1:2,40:42:99:1438,120,0	1/1:0,25:25:63.19:755,63,0	1/1:0,15:15:45.14:540,45,0
chr10	15229377	.	AAAAC	A	1920.48	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=3.079;DP=782;FS=1.226;HRun=0;HaplotypeScore=151.8265;InbreedingCoeff=0.9785;MQ=60.98;MQ0=3;MQRankSum=-0.107;QD=27.05;ReadPosRankSum=0.310;VQSLOD=3.6582;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:87.14:0,87,1927	0/0:11,0:11:27.06:0,27,285	0/0:27,0:18:38.99:0,39,637	0/0:21,0:16:29.41:0,29,394	1/1:5,24:29:72.07:1089,72,0	1/1:10,12:22:26.45:415,26,0	1/1:5,15:20:33.11:559,33,0	0/0:23,0:23:41.92:0,42,426	0/0:24,0:24:51.10:0,51,544	0/0:34,0:33:75.10:0,75,785	0/0:22,0:22:54.13:0,54,584	0/0:38,0:38:93.23:0,93,1868	0/0:40,0:40:99:0,108,2478	0/0:37,0:37:90.27:0,90,1951	0/0:36,0:36:87.24:0,87,1849	0/0:31,0:31:72.22:0,72,1471	0/0:44,0:44:90.21:0,90,977	0/0:22,0:22:51.17:0,51,1215	0/0:24,0:23:45.15:0,45,912	0/0:31,0:31:75.19:0,75,1533	0/0:5,0:5:9.03:0,9,220	0/0:22,0:22:57.18:0,57,1275	0/0:31,0:31:93.28:0,93,2003	0/0:38,0:38:81.17:0,81,1772	0/0:33,0:33:72.23:0,72,1670	0/0:42,0:42:99:0,102,1112	0/0:25,0:25:57.13:0,57,611	0/0:15,0:15:45.12:0,45,497
chr10	15229530	.	T	TGAGA	17780.78	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-15.004;DP=794;FS=9.856;HRun=0;HaplotypeScore=126.0487;InbreedingCoeff=0.9967;MQ=80.45;MQ0=0;MQRankSum=-8.347;QD=74.09;ReadPosRankSum=1.414;VQSLOD=6.6928;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,160,3261	1/1:0,11:12:21.07:607,21,0	0/0:23,0:23:69.23:0,69,1328	0/0:26,0:26:62.85:0,63,1380	0/0:31,0:31:84.27:0,84,1659	0/0:20,0:20:54.19:0,54,1125	0/0:31,0:31:93.32:0,93,1884	1/1:7,18:28:84.27:2198,84,0	1/1:2,22:24:60.20:1684,60,0	1/1:6,26:33:99:2621,99,0	1/1:2,5:8:15.05:433,15,0	0/0:32,0:32:93.32:0,93,1902	0/0:33,0:33:99:0,99,2004	0/0:23,0:23:69.22:0,69,1380	0/0:36,0:36:99:0,108,2194	0/0:27,0:27:81.26:0,81,1647	1/1:3,48:54:99:4331,151,0	0/0:10,0:10:30.10:0,30,629	0/0:23,0:22:57.20:0,57,1196	0/0:28,0:27:75.21:0,75,1480	0/0:35,0:35:99:0,105,2111	0/0:38,0:38:99:0,102,2035	0/0:19,0:19:57.18:0,57,1150	0/0:48,0:48:99:0,141,2888	0/0:16,0:16:48.16:0,48,989	1/1:2,45:50:99:3828,144,0	1/1:0,15:15:42.14:1213,42,0	1/1:0,11:11:30.10:868,30,0
chr10	15229638	.	CACACTCACTCACACACACAT	C	919.87	PASS	AB=0.990;AC=7;AF=0.125;AN=56;BaseQRankSum=2.124;DP=1093;FS=14.052;HRun=0;HaplotypeScore=504.4340;InbreedingCoeff=0.5833;MQ=50.29;MQ0=30;MQRankSum=-0.251;QD=4.87;ReadPosRankSum=-4.043;VQSLOD=-0.2240;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:60,0:57:99:0,102,5508	0/0:14,0:14:33.11:0,33,1855	0/0:55,0:18:24.08:0,24,583	0/1:75,0:22:7.86:8,0,201	1/1:22,5:25:12.91:222,13,0	1/1:24,1:22:15.05:351,15,0	0/1:28,0:27:2.31:440,0,2	0/0:40,0:38:43.46:0,43,1127	0/0:41,0:38:54.55:0,55,3037	0/0:45,0:42:99:0,99,4584	0/0:28,0:27:48.10:0,48,2881	0/0:46,0:45:99:0,117,6752	0/0:41,0:40:99:0,104,4656	0/0:37,0:37:74.19:0,74,4439	0/0:47,0:47:59.84:0,60,2603	0/0:39,0:39:65.81:0,66,4143	0/0:37,0:37:54.16:0,54,2141	0/1:33,0:34:35.10:35,0,4012	0/0:21,0:15:27.04:0,27,923	0/0:17,0:17:36.12:0,36,2009	0/0:87,0:83:99:0,171,9753	0/0:44,0:44:93.32:0,93,4747	0/0:26,0:26:57.20:0,57,3180	0/0:65,0:64:99:0,129,6185	0/0:26,0:26:48.16:0,48,2514	0/0:44,0:42:93.27:0,93,5036	0/0:24,0:24:14.08:0,14,2136	0/0:18,0:15:33.06:0,33,1356
chr10	15229654	.	CACAT	C	442.79	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=4.485;DP=1126;FS=4.010;HRun=0;HaplotypeScore=269.3929;InbreedingCoeff=0.6338;MQ=49.72;MQ0=37;MQRankSum=0.852;QD=4.98;ReadPosRankSum=-4.849;VQSLOD=1.2819;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,120,2865	0/0:19,0:19:41.99:0,42,900	0/0:58,0:13:36.12:0,36,777	0/0:75,1:22:28.44:0,28,626	1/1:30,3:31:7.60:165,8,0	1/1:20,4:22:2.42:123,2,0	0/1:32,0:31:27.40:264,0,27	0/0:43,1:43:59.28:0,59,1528	0/0:43,0:40:53.53:0,54,1278	0/0:47,0:44:99:0,114,2717	0/0:28,0:26:54.06:0,54,1240	0/0:49,0:48:99:0,131,3072	0/0:42,0:41:99:0,117,2597	0/0:37,0:37:93.36:0,93,2226	0/0:42,0:42:68.42:0,68,1493	0/0:40,0:40:72.21:0,72,1765	0/0:39,0:39:54.16:0,54,1078	0/0:33,0:34:48.23:0,48,1856	0/0:25,0:18:33.02:0,33,559	0/0:17,0:17:39.13:0,39,961	0/0:95,0:92:99:0,211,4844	0/0:48,0:48:99:0,117,2701	0/0:28,0:27:75.23:0,75,1805	0/0:66,0:65:99:0,156,3639	0/0:22,0:22:54.18:0,54,1308	0/0:42,0:38:71.82:0,72,2236	0/0:24,0:23:45.32:0,45,1106	0/0:16,0:13:32.99:0,33,622
chr10	15229656	.	CAT	C	853.14	PASS	AB=0.971;AC=7;AF=0.125;AN=56;BaseQRankSum=7.577;DP=1117;FS=6.558;HRun=0;HaplotypeScore=237.1577;InbreedingCoeff=0.8478;MQ=49.77;MQ0=36;MQRankSum=1.873;QD=7.17;ReadPosRankSum=-4.660;VQSLOD=1.7683;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:55:99:0,123,2157	0/0:19,0:19:41.65:0,42,640	0/0:59,0:14:39.10:0,39,688	0/0:75,0:22:27.03:0,27,625	1/1:25,7:30:29.57:327,30,0	1/1:18,3:19:16.49:140,16,0	1/1:22,10:31:49.91:523,50,0	0/0:44,0:43:84.81:0,85,1375	0/0:40,0:38:54.15:0,54,972	0/0:48,0:44:99:0,117,2134	0/0:25,1:24:48.98:0,49,932	0/0:49,0:48:99:0,134,2370	0/0:43,0:42:99:0,120,2083	0/0:37,0:37:93.68:0,94,1623	0/0:39,0:39:69.21:0,69,1274	0/0:41,0:41:71.81:0,72,1314	0/0:38,0:38:54.11:0,54,909	0/1:33,1:34:8.82:9,0,1449	0/0:27,0:19:20.99:0,21,455	0/0:18,0:18:39.13:0,39,731	0/0:93,1:90:99:0,179,3651	0/0:48,0:49:99:0,120,2210	0/0:29,0:28:78.21:0,78,1362	0/0:64,1:64:99:0,162,2816	0/0:22,0:22:57.16:0,57,1018	0/0:41,0:37:89.07:0,89,1676	0/0:23,0:22:48.25:0,48,984	0/0:17,0:14:36.05:0,36,569
chr10	15229695	.	TAC	T	2779.69	PASS	AB=0.984;AC=30;AF=0.536;AN=56;BaseQRankSum=-3.811;DP=978;FS=1.180;HRun=0;HaplotypeScore=266.2948;InbreedingCoeff=0.0383;MQ=47.17;MQ0=23;MQRankSum=-0.782;QD=3.77;ReadPosRankSum=-4.301;VQSLOD=2.0282;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:48,0:48:37.84:38,0,160	1/1:9,0:9:4.45:44,4,0	0/0:39,0:5:6:0,6,71	0/0:61,1:13:14.80:0,15,169	0/1:23,4:27:9.23:16,0,9	0/1:18,2:19:21.73:47,0,22	0/1:53,0:53:41.75:134,0,42	1/1:38,0:36:19.83:228,20,0	1/1:29,0:25:14.97:134,15,0	1/1:41,0:31:23.06:288,23,0	1/1:19,0:18:16.44:118,16,0	0/1:52,0:50:79.66:80,0,133	0/1:34,0:33:10.21:10,0,191	0/0:29,0:29:45.68:0,46,189	0/1:39,0:38:13.10:30,0,13	0/1:33,0:33:14.31:127,0,14	1/1:29,0:29:11.72:72,12,0	0/1:38,0:35:57:170,0,57	0/1:16,0:12:5.47:64,0,5	0/1:21,0:21:1.24:94,0,1	1/1:106,0:100:53.11:628,53,0	0/0:37,0:37:34.31:0,34,162	0/0:25,0:24:24.98:0,25,155	0/0:49,0:49:27.29:0,27,224	0/1:24,0:24:45.88:46,0,75	1/1:30,0:27:31.82:366,32,0	0/1:17,0:16:26.37:75,0,26	0/1:12,0:10:2.40:151,0,2
chr10	15229707	.	CACCACACACACT	C	9686.09	PASS	AB=0.968;AC=32;AF=0.571;AN=56;BaseQRankSum=-14.131;DP=1004;FS=3.359;HRun=0;HaplotypeScore=389.7474;InbreedingCoeff=-0.3412;MQ=46.56;MQ0=41;MQRankSum=-4.759;QD=11.06;ReadPosRankSum=-9.628;VQSLOD=0.4480;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:45,0:44:96.50:97,0,2779	1/1:0,9:9:12.04:388,12,0	0/0:35,0:2:6:0,6,71	0/0:71,0:11:20.76:0,21,335	0/1:28,0:28:99:101,0,970	0/0:20,0:21:34.70:0,35,900	0/1:61,0:60:99:296,0,1825	1/1:6,29:30:32.54:1109,33,0	1/1:25,2:23:35.86:458,36,0	1/1:35,6:30:60.20:1339,60,0	1/1:13,4:16:24.02:360,24,0	0/1:46,0:44:99:179,0,2472	0/1:41,0:40:92.71:93,0,2977	0/1:24,0:23:41.51:42,0,1738	0/1:43,0:41:45.43:45,0,1786	0/1:33,0:32:99:228,0,723	1/1:3,24:26:15.05:496,15,0	0/1:38,0:33:99:294,0,2095	0/1:25,0:12:67.47:67,0,575	0/1:23,0:22:99:226,0,1284	0/1:113,0:102:99:990,0,3195	0/1:35,0:35:45.28:45,0,2688	0/1:27,0:24:28.60:29,0,1542	0/1:51,0:51:82.49:82,0,3262	0/1:27,0:26:99:131,0,1316	0/1:20,10:25:37.08:1346,0,37	0/1:10,7:16:99:652,0,124	1/1:9,3:10:10.26:593,10,0
chr10	15229709	.	C	CT	1922.17	PASS	AB=0.952;AC=22;AF=0.393;AN=56;BaseQRankSum=-11.018;DP=1020;FS=22.616;HRun=0;HaplotypeScore=286.5451;InbreedingCoeff=0.5062;MQ=46.31;MQ0=42;MQRankSum=4.529;QD=3.97;ReadPosRankSum=1.946;VQSLOD=1.8085;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:44,0:44:61.89:238,62,0	0/0:9,0:9:10.24:0,10,62	0/0:35,0:3:2.99:0,3,24	0/1:71,1:11:14.25:14,0,177	0/0:28,0:27:49.27:0,49,285	0/1:21,0:23:37.03:37,0,98	0/0:62,0:60:96.24:0,96,614	0/0:35,0:30:33.50:0,34,257	0/0:24,1:21:17.55:0,18,115	0/0:42,0:32:34.57:0,35,268	0/0:15,0:14:15.02:0,15,83	1/1:45,0:43:34.23:295,34,0	1/1:42,0:41:23.93:231,24,0	1/1:25,0:24:29.79:145,30,0	0/0:41,0:40:39.06:0,39,357	0/0:33,0:32:1.89:0,2,205	0/1:28,0:26:8.18:8,0,42	0/0:39,0:35:81:0,81,541	0/1:24,2:13:14.88:15,0,146	0/0:25,0:24:58.81:0,59,340	0/0:111,0:101:99:0,159,1014	1/1:35,1:36:56.67:264,57,0	1/1:28,0:25:50.98:212,51,0	1/1:53,2:55:72.70:417,73,0	1/1:26,0:25:39.55:193,40,0	0/0:30,1:26:30.27:0,30,217	0/1:18,1:17:31.54:32,0,174	0/1:12,1:11:22.48:22,0,101
chr10	15229772	.	TCA	T	7988	PASS	AB=0.698;AC=34;AF=0.607;AN=56;BaseQRankSum=9.910;DP=955;FS=44.465;HRun=0;HaplotypeScore=246.6988;InbreedingCoeff=0.8141;MQ=50.43;MQ0=36;MQRankSum=-7.796;QD=17.44;ReadPosRankSum=1.709;VQSLOD=3.4703;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,1:41:74.83:0,75,1218	1/1:4,5:8:20.96:239,21,0	0/0:78,0:18:19.06:0,19,283	0/0:114,0:25:34.91:0,35,442	1/1:3,13:16:17.94:229,18,0	1/1:4,17:22:46.71:584,47,0	1/1:17,16:32:32.69:420,33,0	0/1:25,14:34:69.77:568,0,70	1/1:6,20:24:46.24:529,46,0	1/1:16,24:37:36.34:844,36,0	1/1:3,15:18:17.54:229,18,0	0/0:43,0:42:99:0,105,1715	0/0:45,0:45:99:0,111,1745	0/0:33,0:33:78.26:0,78,1285	1/1:7,35:41:80.11:990,80,0	1/1:10,20:30:45.06:548,45,0	1/1:6,11:16:30.10:381,30,0	1/1:8,9:14:16.41:263,16,0	1/1:9,3:8:9.03:114,9,0	1/1:8,17:24:8.01:268,8,0	1/1:28,37:59:75.72:942,76,0	0/0:38,0:38:96.30:0,96,1526	0/0:30,0:29:75.26:0,75,1240	0/0:48,0:49:99:0,110,1780	0/0:26,0:25:66.21:0,66,1070	0/1:16,17:31:31.42:540,0,31	1/1:1,4:5:12.04:153,12,0	1/1:2,7:9:8.76:147,9,0
chr10	15229813	.	C	CAG	2514.22	PASS	AB=0.906;AC=22;AF=0.393;AN=56;BaseQRankSum=14.061;DP=908;FS=13.450;HRun=0;HaplotypeScore=267.6800;InbreedingCoeff=0.0833;MQ=42.92;MQ0=64;MQRankSum=-13.405;QD=5.83;ReadPosRankSum=-2.595;VQSLOD=1.3855;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:38:90.19:0,90,1230	0/1:6,1:7:8.01:42,0,8	0/0:67,0:8:10.80:0,11,158	0/0:87,0:11:2.73:0,3,42	0/1:13,4:16:0:0,0,0	1/1:12,5:16:17.72:184,18,0	1/1:19,7:25:23.09:354,23,0	0/1:34,0:23:79.17:79,0,285	0/1:22,4:25:41.73:225,0,42	0/1:33,11:34:99:560,0,194	0/1:12,2:13:0.12:0,0,0	0/0:49,0:47:99:0,119,1721	0/0:35,0:34:93.12:0,93,1310	0/0:45,0:43:99:0,117,1628	1/1:39,0:38:21.61:83,22,0	0/1:34,0:31:4.16:115,0,4	0/1:10,0:10:18.96:19,0,77	0/1:9,0:9:36.38:41,0,36	0/1:14,0:5:2.10:56,0,2	0/1:23,0:21:26.93:70,0,27	1/1:53,0:39:9:97,9,0	0/0:40,0:37:90.20:0,90,1284	0/0:28,0:27:60.13:0,60,879	0/0:53,0:53:99:0,120,1657	0/0:33,0:31:75.24:0,75,1121	0/1:34,5:32:57.82:555,0,58	0/1:9,3:9:55.02:55,0,77	0/1:9,4:12:58.39:151,0,58
chr10	15229814	.	AC	A	3898.11	PASS	AB=0.751;AC=24;AF=0.429;AN=56;BaseQRankSum=14.332;DP=871;FS=4.044;HRun=2;HaplotypeScore=233.4257;InbreedingCoeff=0.0264;MQ=43.01;MQ0=65;MQRankSum=-13.153;QD=8.04;ReadPosRankSum=-1.849;VQSLOD=0.3955;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:39:87.13:0,87,1250	1/1:3,3:5:2.18:58,2,0	0/0:68,0:8:11.27:0,11,130	0/1:87,0:11:8.89:9,0,29	0/1:12,6:16:0.68:1,0,1	1/1:8,9:17:17.81:216,18,0	1/1:14,9:21:34.18:367,34,0	0/1:20,8:17:99:114,0,355	0/1:10,11:21:47.32:287,0,47	0/1:35,10:31:99:580,0,229	0/1:6,6:11:0.40:1,0,0	0/0:48,0:46:99:0,122,1750	0/0:33,0:32:87.28:0,87,1257	0/0:45,0:42:99:0,108,1573	1/1:8,28:36:38.67:452,39,0	0/1:11,22:30:7.07:474,0,7	0/1:5,2:7:27.97:28,0,40	0/1:4,5:9:33.65:111,0,34	0/1:9,3:4:26.52:104,0,27	0/1:5,17:20:23.02:178,0,23	1/1:32,14:33:2.69:24,3,0	0/0:38,0:35:93.31:0,93,1347	0/0:29,0:28:58.70:0,59,823	0/0:52,0:52:99:0,123,1715	0/0:33,0:31:75.24:0,75,1078	0/1:21,15:30:99:569,0,193	0/1:12,0:8:53.86:87,0,54	0/1:8,4:11:54.36:239,0,54
chr10	15229815	.	C	CACT	3038.35	PASS	AB=0.879;AC=23;AF=0.411;AN=56;BaseQRankSum=13.381;DP=866;FS=13.915;HRun=0;HaplotypeScore=251.8055;InbreedingCoeff=0.0658;MQ=42.82;MQ0=64;MQRankSum=-12.507;QD=6.42;ReadPosRankSum=-2.211;VQSLOD=0.7537;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:87.14:0,87,1530	1/1:5,1:5:4.48:71,4,0	0/0:66,0:8:13.05:0,13,169	0/1:88,0:11:13.96:14,0,33	0/1:13,4:16:0.74:2,0,1	1/1:11,5:16:17.45:256,17,0	1/1:16,6:22:21.89:467,22,0	0/1:29,0:18:57.60:58,0,421	0/1:16,4:21:56.36:334,0,56	0/1:34,11:32:99:707,0,287	0/1:10,2:11:0.57:1,0,1	0/0:50,0:47:99:0,122,2142	0/0:32,0:31:87.28:0,87,1543	0/0:44,0:41:99:0,111,1977	1/1:35,0:34:16.61:67,17,0	0/1:31,0:28:39.13:39,0,56	0/1:5,0:7:46.66:57,0,47	0/1:9,0:9:34.09:34,0,56	0/0:11,0:4:6.75:0,7,50	0/1:22,0:20:39.05:51,0,39	1/1:38,0:31:2.83:24,3,0	0/0:38,0:35:92.94:0,93,1627	0/0:29,0:28:60.16:0,60,1043	0/0:51,0:51:99:0,123,2090	0/0:33,0:31:75.25:0,75,1332	0/1:33,5:31:99:671,0,201	0/1:9,2:8:72.10:86,0,72	0/1:8,4:11:83.93:274,0,84
chr10	15229825	.	AC	A	2842.93	PASS	AB=0.796;AC=22;AF=0.393;AN=56;BaseQRankSum=14.167;DP=863;FS=4.285;HRun=2;HaplotypeScore=242.9256;InbreedingCoeff=0.0804;MQ=41.00;MQ0=75;MQRankSum=-13.244;QD=6.80;ReadPosRankSum=1.087;VQSLOD=0.8174;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,1:37:87.29:0,87,1271	1/1:5,1:5:3.01:34,3,0	0/0:49,1:5:6.27:0,6,48	0/0:73,0:9:0.82:0,1,36	0/1:13,6:16:0.86:1,0,1	1/1:12,5:16:17.91:179,18,0	1/1:16,9:22:31.18:308,31,0	0/1:28,0:15:18.20:18,0,294	0/1:19,6:23:33.63:224,0,34	0/1:30,12:28:99:369,0,177	0/1:10,4:12:0.38:1,0,0	0/0:53,0:50:99:0,122,1720	0/0:37,0:35:84.73:0,85,1203	0/0:48,0:45:99:0,120,1741	1/1:13,19:31:35.63:394,36,0	0/1:13,23:33:2.44:453,0,2	0/1:7,0:7:10.66:11,0,66	0/1:9,2:11:49.67:113,0,50	0/1:13,3:7:24.73:106,0,25	0/1:9,18:24:6.18:115,0,6	0/1:27,20:32:0.30:0,0,0	0/0:38,0:35:84.23:0,84,1192	0/0:28,0:26:55.07:0,55,784	0/0:48,0:48:99:0,108,1594	0/0:31,0:28:69.04:0,69,1013	0/1:35,5:32:99:462,0,191	0/1:10,3:8:24.07:24,0,31	0/1:8,5:11:55.22:197,0,55
chr10	15229826	.	C	CT	3138.12	PASS	AB=0.827;AC=24;AF=0.429;AN=56;BaseQRankSum=14.175;DP=863;FS=3.563;HRun=0;HaplotypeScore=243.7355;InbreedingCoeff=0.0941;MQ=41.09;MQ0=75;MQRankSum=-13.884;QD=6.39;ReadPosRankSum=1.001;VQSLOD=3.4414;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:37:87.29:0,87,1210	1/1:3,3:5:3:28,3,0	0/0:47,0:5:6.74:0,7,55	0/1:72,1:9:2.35:2,0,36	0/1:14,7:19:1.12:1,0,1	1/1:7,9:16:17.94:253,18,0	1/1:14,9:24:30.93:368,31,0	0/1:22,4:13:93.16:93,0,232	0/1:13,11:24:23.45:308,0,23	0/1:30,8:25:99:493,0,147	0/1:8,6:12:0.30:0,0,0	0/0:53,1:51:99:0,122,1651	0/0:36,0:34:84.73:0,85,1142	0/0:48,0:45:99:0,120,1658	1/1:26,4:29:32.36:169,32,0	1/1:31,5:33:5.28:252,5,0	0/1:4,3:7:27.39:27,0,57	0/1:6,3:10:65.31:140,0,65	0/1:16,0:7:31.47:47,0,31	0/1:24,2:24:7.51:56,0,8	0/1:42,4:32:0.49:1,0,0	0/0:40,0:37:83.84:0,84,1130	0/0:28,0:26:56.40:0,56,751	0/0:46,1:47:99:0,108,1509	0/0:33,1:31:69.03:0,69,963	0/1:25,17:33:99:781,0,149	0/1:14,0:9:21.15:21,0,61	0/1:10,3:11:47.59:265,0,48
chr10	15229858	.	CCA	C	203.03	PASS	AB=0.953;AC=8;AF=0.148;AN=54;BaseQRankSum=5.967;DP=842;FS=9.230;HRun=0;HaplotypeScore=227.3568;InbreedingCoeff=0.2504;MQ=39.04;MQ0=67;MQRankSum=-6.243;QD=1.24;ReadPosRankSum=-1.696;VQSLOD=1.3053;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:39:88.99:0,89,1427	0/0:4,0:4:5.28:0,5,83	./.	0/0:47,1:5:5.89:0,6,80	0/0:9,15:21:0:0,0,1	1/1:3,6:9:10.36:145,10,0	0/1:11,7:20:0.17:93,0,0	0/0:20,0:9:12.51:0,13,187	0/1:25,0:24:3.29:3,0,261	0/0:38,0:34:54.97:0,55,583	0/0:10,0:7:0:0,0,0	0/0:51,0:47:99:0,108,1706	0/0:38,0:35:52.67:0,53,974	0/0:46,0:44:99:0,104,1568	0/0:23,0:22:4.01:0,4,39	0/0:33,1:33:27.92:0,28,393	0/1:11,0:10:8.54:9,0,93	0/1:15,0:13:59.64:60,0,106	0/0:23,0:6:9.03:0,9,140	0/0:32,0:30:18.61:0,19,185	0/1:56,2:46:12.02:12,0,18	0/0:50,0:48:87.27:0,87,1390	0/0:28,0:25:43.38:0,43,675	0/0:45,0:44:93.77:0,94,1498	0/0:37,0:33:53.98:0,54,780	0/0:27,0:19:19.16:0,19,314	0/1:8,0:10:1.66:2,0,89	0/0:13,0:13:32.14:0,32,325
chr10	15229868	.	ACT	A	131.20	PASS	AB=0.973;AC=12;AF=0.214;AN=56;BaseQRankSum=7.294;DP=858;FS=2.169;HRun=0;HaplotypeScore=216.3832;InbreedingCoeff=0.0591;MQ=39.53;MQ0=63;MQRankSum=-6.962;QD=0.52;ReadPosRankSum=-4.491;VQSLOD=1.8509;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:41:94.82:0,95,1607	0/0:5,0:4:5.66:0,6,61	0/0:22,0:1:2.90:0,3,16	0/0:39,0:5:8.58:0,9,122	0/0:24,0:20:0:0,0,0	1/1:9,0:9:11.78:84,12,0	0/1:23,1:22:21.83:36,0,22	0/0:20,0:6:11.99:0,12,135	0/1:30,0:23:7.34:7,0,174	0/1:42,0:30:19.02:19,0,410	1/1:15,0:11:1.82:5,2,0	0/0:56,0:51:99:0,108,1852	0/0:37,0:35:65.18:0,65,1089	0/0:52,0:49:99:0,105,1699	0/0:19,0:18:2.84:0,3,20	0/0:32,1:32:31.44:0,31,234	0/1:15,0:13:37.36:40,0,37	0/1:16,1:14:41.05:41,0,60	0/0:23,0:6:9.03:0,9,139	0/0:32,0:30:3.51:0,4,155	0/1:73,2:56:1.63:2,0,32	0/0:55,0:53:95.75:0,96,1486	0/0:32,0:28:54:0,54,852	0/0:49,1:48:82.27:0,82,1666	0/0:37,0:33:42.53:0,43,804	0/0:25,0:13:11.39:0,11,188	0/1:9,0:9:30.14:30,0,52	0/1:17,0:13:2.60:3,0,213
chr10	15229870	.	T	TCA	2015.87	PASS	AB=0.914;AC=25;AF=0.446;AN=56;BaseQRankSum=7.921;DP=849;FS=12.100;HRun=0;HaplotypeScore=213.4109;InbreedingCoeff=0.4307;MQ=39.11;MQ0=62;MQRankSum=-10.562;QD=5.29;ReadPosRankSum=-3.586;VQSLOD=1.3487;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:42:89.31:0,89,1108	1/1:4,3:6:7.15:89,7,0	0/0:22,0:1:2.88:0,3,15	0/0:38,0:5:8.89:0,9,114	0/1:24,0:20:0:0,0,0	1/1:9,0:9:7.20:26,7,0	0/1:24,0:22:6.21:6,0,33	1/1:17,1:6:9.49:106,9,0	1/1:18,13:24:28.04:280,28,0	0/1:33,6:28:88.98:262,0,89	1/1:11,4:10:1.75:5,2,0	0/0:53,0:50:99:0,102,1310	0/0:36,0:34:47.88:0,48,806	0/0:48,0:45:90.01:0,90,1134	1/1:14,3:16:3.01:49,3,0	1/1:32,1:32:50.94:673,51,0	0/1:10,5:13:17.21:120,0,17	0/1:18,0:15:16.78:98,0,17	0/0:23,0:6:6.02:0,6,77	0/0:31,0:29:3.43:0,3,107	0/1:75,0:56:1.68:2,0,38	0/0:53,0:52:75.20:0,75,935	0/0:33,0:28:51.07:0,51,639	0/0:50,0:48:90.15:0,90,1143	0/0:36,0:32:45.05:0,45,543	1/1:20,6:13:19.09:238,19,0	1/1:8,3:10:12.87:141,13,0	0/1:13,4:13:23.02:105,0,23
chr10	15229874	.	ACACACT	A	1400.82	PASS	AB=0.989;AC=21;AF=0.375;AN=56;BaseQRankSum=7.228;DP=842;FS=14.956;HRun=0;HaplotypeScore=233.5930;InbreedingCoeff=0.2893;MQ=39.49;MQ0=56;MQRankSum=-8.993;QD=3.87;ReadPosRankSum=-4.083;VQSLOD=0.6231;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:41:89.68:0,90,2158	0/0:7,0:6:4.22:0,4,71	0/0:21,0:2:5.91:0,6,52	0/0:36,0:5:8.82:0,9,220	1/1:25,1:22:2.66:46,3,0	1/1:9,0:9:5.18:23,5,0	0/1:23,2:23:2.77:3,0,24	1/1:19,0:7:12.76:117,13,0	0/1:31,0:24:60.21:60,0,76	0/1:42,0:32:99:107,0,120	1/1:17,0:11:2.70:13,3,0	0/0:55,0:52:99:0,111,2596	0/0:37,0:35:58.69:0,59,1676	0/0:47,0:44:90.28:0,90,2101	1/1:8,8:15:2.75:48,3,0	1/1:14,16:30:45.94:702,46,0	0/1:15,0:14:31.41:31,0,43	1/1:13,4:14:6.07:266,6,0	0/0:21,0:6:0.93:0,1,15	0/0:28,0:26:9.76:0,10,73	0/1:71,0:53:5.06:5,0,31	0/0:55,0:53:78.12:0,78,1890	0/0:32,0:28:51.03:0,51,1245	0/0:51,0:49:99:0,102,2505	0/0:37,0:33:45.07:0,45,1124	0/1:24,0:12:27.52:83,0,28	0/0:10,0:9:9.54:0,10,93	0/1:18,0:14:48.50:68,0,49
chr10	15229876	.	ACACT	A	624.21	PASS	AB=0.994;AC=18;AF=0.321;AN=56;BaseQRankSum=7.524;DP=821;FS=8.888;HRun=0;HaplotypeScore=215.2646;InbreedingCoeff=0.0829;MQ=40.97;MQ0=51;MQRankSum=-8.706;QD=1.82;ReadPosRankSum=-3.782;VQSLOD=0.9235;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:39:78.54:0,79,1749	0/0:7,0:6:8.77:0,9,75	0/1:21,0:2:0.23:0,0,12	0/0:35,0:7:8.49:0,8,187	1/1:25,0:21:2.61:24,3,0	0/0:10,0:10:3.56:0,4,13	0/0:26,0:22:8.47:0,8,58	0/1:19,0:7:8.95:37,0,9	0/1:30,0:23:50.43:50,0,132	0/1:38,0:30:35.61:36,0,262	1/1:17,0:11:0.85:2,1,0	0/0:55,0:52:99:0,115,2187	0/0:37,0:35:38.10:0,38,1313	0/0:47,0:44:93.23:0,93,1780	1/1:15,0:14:0.93:12,1,0	1/1:28,1:29:46.93:308,47,0	0/1:15,0:13:7.12:7,0,56	0/1:15,0:12:3.69:145,0,4	0/0:20,0:6:5.69:0,6,43	0/0:28,0:26:16.47:0,16,88	0/1:64,4:52:28.54:35,0,29	0/0:55,0:53:78.12:0,78,1499	0/0:31,0:28:51.13:0,51,1059	0/0:51,0:49:99:0,105,1926	0/0:33,0:30:44.95:0,45,878	0/1:23,0:11:37.68:50,0,38	0/1:9,0:8:10.33:10,0,63	0/1:19,0:15:60.99:61,0,65
chr10	15229878	.	ACT	A	963.57	PASS	AB=0.951;AC=21;AF=0.375;AN=56;BaseQRankSum=7.792;DP=826;FS=14.711;HRun=0;HaplotypeScore=203.4725;InbreedingCoeff=0.1942;MQ=41.95;MQ0=53;MQRankSum=-8.082;QD=2.66;ReadPosRankSum=-5.910;VQSLOD=-0.2716;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:39:84.95:0,85,1012	0/0:7,0:6:7.07:0,7,38	0/0:22,0:2:5.30:0,5,25	0/0:41,0:8:7.94:0,8,149	1/1:25,0:21:2.64:24,3,0	0/1:10,0:10:7.73:8,0,19	0/1:26,3:25:43.27:53,0,43	0/1:20,0:7:8.27:35,0,8	0/1:28,1:24:17.03:54,0,17	0/1:36,1:30:99:132,0,243	1/1:13,3:10:0.94:2,1,0	0/0:54,0:52:99:0,114,1408	0/0:38,0:36:34.63:0,35,720	0/0:47,0:44:92.55:0,93,1086	1/1:17,0:16:5.46:38,5,0	1/1:28,0:28:47.79:270,48,0	0/1:15,0:13:5.18:47,0,5	0/1:13,3:13:4.23:202,0,4	0/0:21,0:6:6:0,6,67	0/0:27,0:26:13.17:0,13,92	0/1:56,10:51:27.40:34,0,27	0/0:52,0:50:75.47:0,75,772	0/0:30,0:27:50.75:0,51,647	0/0:52,0:50:99:0,105,1113	0/0:30,1:29:44.64:0,45,477	1/1:21,0:10:6.97:80,7,0	1/1:11,0:10:1.83:73,2,0	0/1:20,0:16:32.28:79,0,32
chr10	15229880	.	T	TCA	2271.75	PASS	AB=0.870;AC=29;AF=0.518;AN=56;BaseQRankSum=4.539;DP=809;FS=13.146;HRun=0;HaplotypeScore=189.3120;InbreedingCoeff=0.6204;MQ=42.12;MQ0=54;MQRankSum=-7.515;QD=6.11;ReadPosRankSum=-4.204;VQSLOD=1.6717;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:37:79.46:0,79,945	1/1:4,4:7:5.56:87,6,0	0/0:21,0:2:4.25:0,4,37	0/0:43,0:8:8.89:0,9,115	1/1:12,0:22:0.47:1,0,0	1/1:4,0:9:9.02:111,9,0	1/1:22,0:25:19.01:168,19,0	1/1:18,0:6:1.72:4,2,0	1/1:16,14:24:11.31:295,11,0	0/1:27,9:28:6.44:656,0,6	1/1:10,5:10:3.48:53,3,0	0/0:55,0:53:96.28:0,96,1201	0/0:38,0:36:71.83:0,72,799	0/0:47,0:44:83.93:0,84,963	1/1:17,0:16:7.04:41,7,0	1/1:25,0:25:23.06:111,23,0	1/1:10,5:13:13.65:273,14,0	0/0:15,0:13:6.56:0,7,75	0/0:19,0:4:4.04:0,4,16	0/1:28,0:27:6.20:9,0,6	1/1:62,2:49:0.36:7,0,0	0/0:49,0:47:66.15:0,66,786	0/0:30,0:27:45.11:0,45,568	0/0:50,0:48:96.15:0,96,1175	0/0:31,0:28:42.10:0,42,497	1/1:16,7:11:23.59:280,24,0	1/1:9,2:10:3.20:159,3,0	0/1:13,4:13:1.18:203,0,1
chr10	15229886	.	ACT	A	2469.38	PASS	AB=0.991;AC=27;AF=0.482;AN=56;BaseQRankSum=-1.420;DP=804;FS=5.974;HRun=0;HaplotypeScore=182.1316;InbreedingCoeff=0.1878;MQ=42.73;MQ0=49;MQRankSum=5.837;QD=4.38;ReadPosRankSum=7.640;VQSLOD=1.7118;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:35,1:35:9.08:280,9,0	0/0:8,0:7:0.22:0,0,58	0/0:22,0:2:2.37:0,2,31	0/0:44,1:8:10.99:0,11,148	0/0:26,0:23:5.84:0,6,36	0/0:11,0:11:8.34:0,8,50	0/1:30,1:27:22.28:22,0,49	0/0:19,0:8:16.01:0,16,117	0/0:25,0:21:28.21:0,28,233	0/0:41,0:34:1.95:0,2,477	0/0:15,0:10:2.08:0,2,24	0/1:52,1:51:74.71:249,0,75	1/1:39,0:38:36.78:360,37,0	0/1:45,0:43:99:257,0,99	0/1:16,0:15:8.52:9,0,10	0/1:27,0:27:23.71:123,0,24	0/1:15,0:13:2.42:2,0,152	1/1:12,1:11:0.87:128,1,0	1/1:20,0:4:3.73:16,4,0	1/1:27,0:26:4.01:17,4,0	1/1:54,5:46:3.25:11,3,0	1/1:46,1:45:37.40:348,37,0	0/1:28,1:26:50.32:127,0,50	1/1:49,0:47:58.78:411,59,0	1/1:28,0:26:48.60:270,49,0	0/0:25,0:14:15.09:0,15,276	0/1:11,0:10:2.21:2,0,163	0/1:18,0:15:4.82:5,0,231
chr10	15229887	.	CTCACACA	C	1315.90	PASS	AB=0.936;AC=19;AF=0.339;AN=56;BaseQRankSum=4.520;DP=799;FS=1.156;HRun=0;HaplotypeScore=219.9230;InbreedingCoeff=0.4048;MQ=43.09;MQ0=48;MQRankSum=-4.462;QD=4.29;ReadPosRankSum=-2.998;VQSLOD=2.2333;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:35:83.25:0,83,1589	0/1:8,0:7:3.30:3,0,92	0/0:23,0:2:6.02:0,6,101	0/1:46,0:8:0.22:0,0,259	1/1:26,0:23:5.63:91,6,0	1/1:11,0:11:9.21:119,9,0	0/1:30,0:27:6.01:296,0,6	0/0:19,0:8:12.85:0,13,217	0/0:25,0:22:18.93:0,19,269	0/0:43,0:36:26.14:0,26,690	1/1:13,0:10:2.47:13,2,0	0/0:53,0:51:96.65:0,97,1852	0/0:38,0:37:75.22:0,75,1372	0/0:44,0:42:84.18:0,84,1567	1/1:15,0:14:9.03:143,9,0	0/1:27,1:28:46.73:244,0,47	0/1:14,0:13:34.02:34,0,40	0/1:11,0:11:99:191,0,178	1/1:15,2:4:6.02:148,6,0	1/1:4,17:23:12.47:202,12,0	0/1:40,7:43:0.82:1,0,23	0/0:48,0:46:66.23:0,66,1308	0/0:30,0:27:45.15:0,45,910	0/0:47,0:46:99:0,99,1892	0/0:29,0:27:51.27:0,51,859	0/0:24,0:14:8.55:0,9,263	0/0:13,0:11:25.72:0,26,311	0/0:18,0:15:6.68:0,7,198
chr10	15229888	.	TCA	T	6550.95	PASS	AB=0.938;AC=21;AF=0.375;AN=56;BaseQRankSum=-10.334;DP=804;FS=15.062;HRun=0;HaplotypeScore=172.3153;InbreedingCoeff=0.7046;MQ=42.95;MQ0=47;MQRankSum=10.846;QD=17.24;ReadPosRankSum=8.305;VQSLOD=3.1202;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:14,21:34:65.47:856,65,0	0/0:10,0:9:11.04:0,11,117	0/0:22,0:2:5.51:0,6,59	0/0:44,0:8:7.15:0,7,94	0/0:27,0:23:5.93:0,6,42	0/0:11,0:11:13.64:0,14,83	0/0:30,0:27:17.10:0,17,103	0/0:21,0:9:20.87:0,21,268	0/0:26,0:22:28.69:0,29,355	0/0:46,0:39:77.44:0,77,1073	0/0:14,0:10:2.22:0,2,34	1/1:14,39:51:72.01:925,72,0	1/1:3,33:36:65.24:821,65,0	1/1:8,34:40:60.19:775,60,0	0/0:15,0:14:4.47:0,4,22	0/0:29,0:29:10.51:0,11,138	0/0:16,0:14:16.69:0,17,248	0/1:14,1:13:32.32:32,0,58	1/1:20,0:5:0.56:11,1,0	1/1:25,0:24:3.13:15,3,0	0/0:57,0:44:1.45:0,1,14	1/1:8,39:45:62.88:817,63,0	1/1:7,23:27:33.11:429,33,0	1/1:19,29:46:95.68:1177,96,0	1/1:13,16:27:54:694,54,0	0/0:24,0:14:33.10:0,33,466	0/0:12,1:11:3.19:0,3,236	0/0:18,0:15:26.91:0,27,353
chr10	15229898	.	ACT	A	2231.39	PASS	AB=0.989;AC=13;AF=0.232;AN=56;BaseQRankSum=-4.347;DP=860;FS=3.357;HRun=0;HaplotypeScore=198.6736;InbreedingCoeff=0.3172;MQ=42.80;MQ0=38;MQRankSum=7.927;QD=5.63;ReadPosRankSum=10.704;VQSLOD=1.7087;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:33,1:33:10.18:288,10,0	0/0:15,0:14:9.23:0,9,170	0/0:24,0:3:2.15:0,2,74	0/0:42,0:8:6.51:0,7,58	0/0:28,0:25:9.01:0,9,115	0/0:13,0:13:14.42:0,14,134	0/0:36,0:32:10.22:0,10,230	0/0:35,0:16:27.91:0,28,537	0/0:29,0:25:34.84:0,35,466	0/0:49,0:43:68.05:0,68,1518	0/0:13,0:9:2.09:0,2,54	0/1:46,2:47:0.75:340,0,1	0/1:40,0:40:60.98:271,0,61	1/1:38,0:36:35.76:310,36,0	0/0:20,0:18:5.87:0,6,64	0/0:31,0:31:28.67:0,29,155	0/0:20,0:18:15.68:0,16,437	0/1:15,0:13:59.89:77,0,60	0/0:14,0:4:11.21:0,11,85	0/0:27,0:26:10.08:0,10,62	0/1:59,1:46:1.63:2,0,22	1/1:47,0:46:28.57:311,29,0	0/1:28,0:25:10.33:133,0,10	0/1:53,1:51:2.36:435,0,2	0/1:31,0:31:25.41:226,0,25	0/0:29,0:18:23.30:0,23,649	0/0:18,0:17:8.80:0,9,350	0/0:19,0:16:31.60:0,32,477
chr10	15229918	.	TCACACACACTCA	T	800.99	PASS	AB=0.825;AC=4;AF=0.071;AN=56;BaseQRankSum=2.216;DP=952;FS=1.058;HRun=0;HaplotypeScore=325.5170;InbreedingCoeff=0.4692;MQ=44.51;MQ0=37;MQRankSum=-5.030;QD=11.28;ReadPosRankSum=-0.615;VQSLOD=1.2154;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:60.18:0,60,2374	0/0:22,0:20:20.66:0,21,468	0/0:33,0:4:4.83:0,5,81	0/0:55,0:10:7.97:0,8,154	0/0:33,0:31:9.10:0,9,396	0/0:17,0:17:22.67:0,23,736	0/0:41,0:37:34.12:0,34,1647	0/0:35,0:20:33.08:0,33,609	0/0:27,0:23:21.93:0,22,675	0/0:50,0:44:88.18:0,88,2920	0/0:16,0:12:9.03:0,9,270	0/0:53,0:52:77.91:0,78,3177	0/0:46,0:46:95.22:0,95,3657	0/0:44,0:43:75.12:0,75,2722	0/1:14,10:23:0.09:0,0,0	1/1:23,7:30:23.89:722,24,0	0/0:26,0:24:48.76:0,49,1436	0/1:16,1:14:70.97:183,0,71	0/0:16,0:11:21.06:0,21,506	0/0:26,0:25:11.96:0,12,354	0/0:70,0:58:1.24:0,1,292	0/0:47,0:45:61.09:0,61,2250	0/0:22,0:20:36.08:0,36,1291	0/0:56,0:54:99:0,99,3899	0/0:29,0:30:48.03:0,48,2292	0/0:38,0:28:60.21:0,60,1966	0/0:19,0:18:37.73:0,38,948	0/0:25,0:22:37.27:0,37,1516
chr10	15229928	.	TCA	T	781.91	PASS	AB=0.956;AC=11;AF=0.196;AN=56;BaseQRankSum=2.507;DP=1002;FS=2.773;HRun=0;HaplotypeScore=235.5673;InbreedingCoeff=0.4610;MQ=42.81;MQ0=38;MQRankSum=-3.285;QD=3.34;ReadPosRankSum=-2.266;VQSLOD=2.3522;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:58.52:0,59,1103	0/0:23,0:21:9.75:0,10,110	0/0:38,0:3:5.51:0,6,60	0/0:57,0:7:10.32:0,10,112	0/0:34,0:33:12.51:0,13,197	0/0:19,0:19:24.08:0,24,387	0/0:51,0:47:49.94:0,50,887	0/0:43,0:26:45.29:0,45,454	0/0:28,0:23:5.78:0,6,65	0/0:48,0:42:55.81:0,56,372	0/0:20,0:15:3.72:0,4,19	0/0:47,0:46:96.03:0,96,1472	0/0:49,0:49:99:0,110,1821	0/0:49,0:48:91.55:0,92,1493	0/1:23,0:22:0:0,0,0	0/1:26,2:28:21.84:100,0,22	0/1:29,2:28:2.08:2,0,144	0/1:21,1:20:73.56:173,0,74	1/1:10,9:12:27.06:328,27,0	1/1:10,15:24:16.69:180,17,0	1/1:36,31:58:10.78:141,11,0	0/0:47,0:45:84.21:0,84,1294	0/0:24,0:22:45.15:0,45,719	0/0:58,0:56:70.39:0,70,1689	0/0:30,1:31:15.17:0,15,825	0/0:42,0:32:49.34:0,49,267	0/1:18,0:18:7.42:7,0,117	0/0:25,0:22:30.80:0,31,159
chr10	15229930	.	A	ACT	834.01	PASS	AB=0.963;AC=6;AF=0.107;AN=56;BaseQRankSum=3.822;DP=1015;FS=5.715;HRun=0;HaplotypeScore=241.8898;InbreedingCoeff=0.2103;MQ=42.96;MQ0=37;MQRankSum=-4.453;QD=4.79;ReadPosRankSum=-4.314;VQSLOD=1.9872;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:69.13:0,69,1058	0/0:21,0:20:26.24:0,26,302	0/0:40,0:3:2.65:0,3,65	0/0:59,0:8:11.58:0,12,129	0/0:34,0:33:12.19:0,12,183	0/0:19,0:19:29.21:0,29,383	0/0:52,0:48:55.81:0,56,837	0/0:43,0:27:67.32:0,67,753	0/0:26,0:21:22.53:0,23,336	0/0:49,0:43:99:0,108,1490	0/0:20,0:15:9.03:0,9,125	0/0:49,0:48:96.73:0,97,1379	0/0:51,0:51:99:0,99,1656	0/0:50,0:49:99:0,99,1442	0/0:20,2:21:3:0,3,25	1/1:19,10:29:29.57:602,30,0	0/0:31,0:28:16.21:0,16,673	0/1:21,3:22:75.20:305,0,75	0/0:21,0:13:17.09:0,17,147	0/1:24,0:23:2.75:3,0,51	0/1:72,0:62:32.08:32,0,34	0/0:45,0:43:87.64:0,88,1216	0/0:24,0:22:48.15:0,48,702	0/0:59,0:58:99:0,115,1697	0/0:30,0:30:59.77:0,60,837	0/0:42,0:33:90.98:0,91,1115	0/0:19,0:18:44.33:0,44,517	0/1:24,1:22:15.72:16,0,651
chr10	15229940	.	TCA	T	4838.74	PASS	AB=0.724;AC=15;AF=0.268;AN=56;BaseQRankSum=-0.277;DP=1021;FS=6.785;HRun=0;HaplotypeScore=222.0401;InbreedingCoeff=0.6960;MQ=43.79;MQ0=36;MQRankSum=-6.008;QD=18.05;ReadPosRankSum=3.766;VQSLOD=3.7851;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:69.84:0,70,1102	0/1:13,11:23:10.77:236,0,11	0/0:42,0:5:11.21:0,11,106	0/0:67,0:13:11.56:0,12,117	0/0:31,0:29:12.51:0,13,200	0/0:18,0:18:30.10:0,30,471	0/0:51,0:49:48.91:0,49,972	0/1:32,9:26:22.18:417,0,22	1/1:6,18:20:20.55:269,21,0	1/1:17,30:42:99:1336,105,0	1/1:9,12:16:8.69:115,9,0	0/0:49,0:48:93.05:0,93,1453	0/0:58,0:58:99:0,126,1988	0/0:50,0:49:77.31:0,77,1457	0/0:23,0:22:12.04:0,12,183	0/0:28,1:29:22.11:0,22,401	0/1:15,15:28:17.13:488,0,17	0/0:24,0:22:36.87:0,37,408	0/0:21,0:11:15.71:0,16,106	0/0:25,0:24:28.78:0,29,242	0/0:74,0:65:11.33:0,11,360	0/0:41,0:39:76.81:0,77,1256	0/0:22,0:21:33.11:0,33,553	0/0:61,0:59:99:0,120,1846	0/0:31,0:31:65.87:0,66,1037	1/1:11,26:31:59.33:993,59,0	1/1:7,11:17:22.30:369,22,0	1/1:8,17:23:43.79:615,44,0
chr10	15229951	.	CAT	C	2027.32	PASS	AB=0.972;AC=15;AF=0.268;AN=56;BaseQRankSum=5.644;DP=1017;FS=3.635;HRun=0;HaplotypeScore=235.1346;InbreedingCoeff=0.6854;MQ=46.07;MQ0=30;MQRankSum=-6.236;QD=7.98;ReadPosRankSum=2.987;VQSLOD=3.4651;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:64.13:0,64,1235	0/1:24,0:24:79.47:102,0,79	0/0:50,0:5:11.95:0,12,148	0/0:70,1:15:17.12:0,17,184	0/0:31,0:30:1.39:0,1,276	0/0:18,0:18:32.58:0,33,521	0/0:58,0:57:53.92:0,54,1116	0/1:35,0:23:60.93:145,0,61	0/1:20,1:18:1.95:115,0,2	1/1:49,1:44:79.39:629,79,0	1/1:20,0:18:11.08:57,11,0	0/0:48,0:47:92.85:0,93,1668	0/0:55,0:55:99:0,126,2270	0/0:49,1:50:84.43:0,84,1723	0/0:26,0:26:17.93:0,18,280	0/0:32,0:32:61.02:0,61,753	1/1:26,0:25:19.97:255,20,0	0/0:27,0:25:64.78:0,65,730	0/0:21,0:11:24:0,24,268	0/0:25,0:23:36.09:0,36,499	0/0:75,0:68:2.45:0,2,623	0/0:36,0:36:78.92:0,79,1396	0/0:20,0:19:36.07:0,36,621	0/0:54,2:54:99:0,123,2170	0/0:30,0:30:61.12:0,61,1162	1/1:37,0:33:39.43:381,39,0	1/1:15,0:14:15.47:197,15,0	1/1:24,1:25:19.25:335,19,0
chr10	15229990	.	A	ACAC	3433.46	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=5.278;DP=1096;FS=40.802;HRun=0;HaplotypeScore=244.9959;InbreedingCoeff=0.8292;MQ=48.13;MQ0=53;MQRankSum=-1.768;QD=21.33;ReadPosRankSum=-0.363;VQSLOD=1.9907;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:88.59:0,89,1470	0/1:20,0:19:3.11:3,0,572	0/0:53,0:5:8.64:0,9,147	0/0:78,0:12:18.59:0,19,267	0/0:39,0:37:35.67:0,36,651	0/0:20,0:19:40.52:0,41,726	0/0:58,0:58:83.37:0,83,1364	0/0:35,0:18:43.88:0,44,705	0/0:19,0:15:17.10:0,17,259	0/0:43,0:34:85.61:0,86,1440	0/0:19,0:17:5.97:0,6,107	0/0:57,0:56:99:0,150,2593	0/0:53,0:53:99:0,147,2488	0/0:66,0:66:99:0,177,2984	0/0:46,0:44:56.90:0,57,984	0/0:37,0:37:72.01:0,72,1173	0/0:19,0:19:36.86:0,37,382	0/0:35,0:32:63.20:0,63,1389	1/1:18,6:17:35.54:567,36,0	1/1:5,18:22:33.04:729,33,0	1/1:36,50:80:99:2135,110,0	0/0:39,0:36:99:0,105,1681	0/0:26,0:23:60.18:0,60,936	0/0:58,0:57:99:0,115,2115	0/0:26,0:25:60.09:0,60,980	0/0:37,0:29:79.48:0,79,1322	0/0:8,0:8:15.96:0,16,290	0/0:21,0:20:39.09:0,39,633
chr10	15229998	.	ACACT	A	1896.95	PASS	AB=0.982;AC=17;AF=0.304;AN=56;BaseQRankSum=8.632;DP=1077;FS=11.607;HRun=0;HaplotypeScore=254.1862;InbreedingCoeff=0.4004;MQ=46.75;MQ0=53;MQRankSum=-6.501;QD=6.04;ReadPosRankSum=-2.934;VQSLOD=0.9374;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:81.90:0,82,1876	0/1:15,0:14:5.92:114,0,6	0/0:48,0:5:11.18:0,11,121	0/0:66,0:8:11.76:0,12,178	0/1:35,0:34:41.98:42,0,81	0/1:21,0:20:74.98:75,0,75	0/1:57,0:54:92.88:93,0,154	1/1:29,0:16:20.97:228,21,0	1/1:14,3:12:9.69:151,10,0	1/1:45,2:37:24.55:618,25,0	1/1:16,2:16:3.01:49,3,0	0/0:54,0:53:99:0,124,3114	0/0:54,0:54:99:0,111,2735	0/0:66,0:66:99:0,165,3672	0/0:47,0:45:55:0,55,1269	0/0:36,0:36:69.16:0,69,1465	0/1:12,2:14:5.23:190,0,5	0/0:36,0:33:90.25:0,90,2091	0/0:29,0:16:29.92:0,30,433	0/0:27,0:25:50.49:0,50,889	0/0:102,0:87:99:0,116,2215	0/0:44,0:41:81.90:0,82,1960	0/0:28,0:26:52.02:0,52,1351	0/0:56,0:55:99:0,102,2781	0/0:25,0:24:35.16:0,35,1110	1/1:36,0:28:30.84:314,31,0	0/1:7,0:7:20.25:45,0,20	0/1:18,0:17:26.83:162,0,27
chr10	15230004	.	ACT	A	509.93	PASS	AB=0.973;AC=11;AF=0.196;AN=56;BaseQRankSum=6.524;DP=1038;FS=15.379;HRun=0;HaplotypeScore=226.9765;InbreedingCoeff=-0.0188;MQ=47.17;MQ0=42;MQRankSum=-6.858;QD=2.09;ReadPosRankSum=-6.596;VQSLOD=-0.4790;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:85.52:0,86,1559	0/1:14,0:13:17.41:61,0,17	0/0:47,0:6:14.71:0,15,169	0/0:61,0:9:15.76:0,16,255	0/0:33,1:33:27.03:0,27,242	0/1:21,2:22:49.85:50,0,229	0/1:45,6:48:29.22:29,0,529	0/1:26,0:12:3.34:48,0,3	0/1:13,0:8:7.17:31,0,7	0/1:44,0:34:69.63:196,0,70	1/1:18,0:16:2.60:10,3,0	0/0:53,0:52:99:0,146,2621	0/0:47,0:47:99:0,132,2385	0/0:66,0:66:99:0,174,3178	0/0:45,0:43:57.30:0,57,1054	0/0:37,0:37:78.51:0,79,1314	0/1:13,0:13:45.75:46,0,51	0/0:39,0:36:96.20:0,96,1691	0/0:30,0:16:33.06:0,33,588	0/0:29,0:28:53.41:0,53,1014	0/0:107,1:95:99:0,122,2387	0/0:40,0:40:99:0,107,1822	0/0:27,0:26:69.22:0,69,1241	0/0:58,0:57:99:0,144,2477	0/0:25,0:25:44.17:0,44,997	0/1:26,0:21:56.50:99,0,56	0/0:5,0:5:1.35:0,1,57	0/1:15,1:15:83.99:85,0,84
chr10	15230012	.	ACACT	A	2631.16	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=6.034;DP=997;FS=7.835;HRun=0;HaplotypeScore=243.0145;InbreedingCoeff=0.3403;MQ=48.05;MQ0=35;MQRankSum=-6.206;QD=11.10;ReadPosRankSum=-1.975;VQSLOD=1.7342;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:88.26:0,88,1982	0/1:13,0:11:0.81:30,0,1	0/0:33,0:5:9.94:0,10,117	0/0:60,0:13:2.37:0,2,149	1/1:23,8:31:33.07:515,33,0	1/1:15,7:21:38.98:578,39,0	1/1:36,16:49:65.20:1000,65,0	0/1:20,0:11:24.08:29,0,24	0/1:14,0:9:51.31:51,0,56	0/1:36,0:27:99:345,0,248	1/1:15,0:13:2.02:23,2,0	0/0:51,0:50:99:0,132,3159	0/0:46,0:46:99:0,120,2596	0/0:66,0:66:99:0,164,3595	0/0:47,0:46:44.84:0,45,1147	0/0:36,0:36:64.54:0,65,1502	0/1:9,0:9:55.21:69,0,55	0/0:39,0:36:87.25:0,87,1960	0/0:30,0:17:20.82:0,21,770	0/0:30,0:29:55.87:0,56,1216	0/0:117,0:106:99:0,163,3545	0/0:41,0:41:89.29:0,89,1999	0/0:29,0:28:68.74:0,69,1399	0/0:52,2:53:99:0,138,2965	0/0:23,0:23:51.15:0,51,1167	0/1:21,0:16:68.86:135,0,69	0/1:4,0:4:30.22:30,0,44	0/0:12,0:11:17.94:0,18,114
chr10	15230018	.	ACT	A	1262.71	PASS	AB=0.877;AC=15;AF=0.268;AN=56;BaseQRankSum=9.605;DP=969;FS=16.401;HRun=0;HaplotypeScore=213.8942;InbreedingCoeff=0.2993;MQ=49.33;MQ0=34;MQRankSum=-6.083;QD=5.66;ReadPosRankSum=-0.176;VQSLOD=1.5926;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:97.55:0,98,1741	0/1:10,1:9:25.03:25,0,41	0/0:30,1:7:14.71:0,15,209	0/0:54,0:12:13.99:0,14,203	1/1:25,0:25:25.92:124,26,0	1/1:22,0:21:18.76:141,19,0	1/1:52,1:50:64.60:382,65,0	0/1:15,2:9:32.51:35,0,33	0/1:15,0:11:41.34:41,0,45	0/1:26,8:27:99:371,0,168	1/1:12,1:12:3.01:32,3,0	0/0:51,0:51:99:0,141,2577	0/0:47,0:47:99:0,135,2348	0/0:64,1:65:99:0,160,3023	0/0:49,0:48:48.27:0,48,965	0/0:33,0:33:78.35:0,78,1264	0/1:6,2:8:61.69:99,0,62	0/0:35,0:33:87.24:0,87,1560	0/0:26,1:15:4.52:0,5,657	0/0:33,0:31:59.41:0,59,1104	0/0:112,1:104:99:0,170,3233	0/0:36,0:36:99:0,99,1836	0/0:29,0:28:72.18:0,72,1281	0/0:59,0:58:99:0,156,2778	0/0:21,0:21:54.15:0,54,990	0/1:16,3:13:99:161,0,112	0/1:5,1:6:28.33:28,0,44	0/0:13,0:11:17.22:0,17,131
chr10	15230020	.	TCACACACTCACACA	T	3429.83	PASS	AB=0.976;AC=16;AF=0.286;AN=56;BaseQRankSum=7.746;DP=980;FS=3.135;HRun=0;HaplotypeScore=360.6462;InbreedingCoeff=0.4346;MQ=49.08;MQ0=35;MQRankSum=-8.114;QD=15.73;ReadPosRankSum=-3.805;VQSLOD=1.0024;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,103,3449	1/1:11,0:9:8.14:89,8,0	0/0:33,0:7:14.84:0,15,342	0/0:57,0:13:16.12:0,16,453	0/1:24,0:24:74.02:74,0,543	0/0:22,0:21:4.20:0,4,635	0/1:53,0:50:29.56:30,0,1215	1/1:21,0:11:15.01:262,15,0	1/1:12,3:11:14.96:416,15,0	0/1:29,2:25:14.29:1517,0,14	1/1:10,2:11:3.01:69,3,0	0/0:49,0:49:99:0,141,6487	0/0:47,0:47:99:0,132,5036	0/0:65,0:65:99:0,175,6885	0/0:50,0:49:52.98:0,53,1969	0/0:32,0:32:60.11:0,60,2226	0/1:10,1:11:4.28:443,0,4	0/0:34,0:32:90.11:0,90,2967	0/0:27,0:16:42.14:0,42,1332	0/0:32,0:30:58.79:0,59,2036	0/0:117,0:107:99:0,180,6298	0/0:36,0:35:99:0,99,3830	0/0:28,0:27:66.20:0,66,2590	0/0:62,0:61:99:0,156,5798	0/0:21,0:21:54.14:0,54,1860	1/1:21,0:13:8.38:410,8,0	0/1:6,0:6:25.14:117,0,25	0/1:13,0:11:4.22:4,0,19
chr10	15230028	.	TCA	T	891.23	PASS	AB=0.822;AC=15;AF=0.268;AN=56;BaseQRankSum=9.331;DP=980;FS=2.037;HRun=0;HaplotypeScore=209.3481;InbreedingCoeff=0.7121;MQ=49.80;MQ0=36;MQRankSum=-9.416;QD=7.31;ReadPosRankSum=-1.430;VQSLOD=3.3700;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:82.42:0,82,1298	1/1:6,1:5:3:29,3,0	0/0:39,0:6:15.02:0,15,217	0/0:56,0:17:13.71:0,14,261	0/0:18,0:18:21:0,21,262	0/0:22,0:20:29.94:0,30,350	0/0:47,0:44:52.86:0,53,690	1/1:19,2:12:10.39:110,10,0	1/1:15,0:13:4.24:51,4,0	0/1:29,8:29:11.81:500,0,12	1/1:8,1:8:3:27,3,0	0/0:51,0:51:99:0,138,2270	0/0:49,0:49:99:0,138,2170	0/0:64,0:64:99:0,169,2799	0/0:48,0:47:39.72:0,40,292	0/0:31,0:31:10.63:0,11,251	1/1:6,5:10:20.84:200,21,0	0/0:30,0:28:44.14:0,44,360	0/0:29,0:20:42.97:0,43,652	0/0:35,0:33:57.75:0,58,921	0/0:129,1:117:99:0,157,3127	0/0:42,0:39:99:0,102,1648	0/0:27,0:25:60.21:0,60,1029	0/0:65,0:64:99:0,151,2473	0/0:22,0:21:48.14:0,48,821	1/1:13,3:8:5.33:107,5,0	1/1:4,1:5:3.01:34,3,0	0/0:7,1:7:2.88:0,3,15
chr10	15230038	.	TCA	T	1825.42	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=5.649;DP=995;FS=5.821;HRun=0;HaplotypeScore=199.9083;InbreedingCoeff=0.8561;MQ=49.78;MQ0=31;MQRankSum=-3.188;QD=18.07;ReadPosRankSum=1.294;VQSLOD=3.3859;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:73.49:0,73,1237	0/0:9,0:8:13.26:0,13,149	0/0:45,0:9:14.97:0,15,226	0/0:60,0:16:28.96:0,29,339	0/0:18,0:18:18.06:0,18,306	0/0:18,0:17:30.07:0,30,447	0/0:51,0:48:69.16:0,69,1115	0/0:32,0:25:53.31:0,53,675	0/0:20,0:19:17.33:0,17,230	0/0:45,0:38:53.35:0,53,556	0/0:9,0:9:8.38:0,8,81	0/0:48,0:48:99:0,135,2221	0/0:47,0:47:99:0,132,2184	0/0:60,1:61:99:0,139,2465	1/1:15,25:39:32.70:471,33,0	1/1:12,21:33:60.65:761,61,0	0/0:16,0:15:11.47:0,11,187	1/1:11,17:26:57.14:735,57,0	0/0:26,1:20:10.97:0,11,630	0/0:31,0:29:50.83:0,51,842	0/0:137,0:124:99:0,236,3750	0/0:40,0:37:99:0,102,1674	0/0:27,0:25:66.20:0,66,1079	0/0:61,0:61:99:0,150,2483	0/0:22,0:21:51.15:0,51,808	0/0:18,0:11:15.42:0,15,240	0/0:4,0:4:4.56:0,5,43	0/0:8,0:7:6.02:0,6,93
chr10	15230076	.	TCA	T	1926.22	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=6.737;DP=1022;FS=1.096;HRun=0;HaplotypeScore=197.2469;InbreedingCoeff=0.9302;MQ=51.56;MQ0=17;MQRankSum=0.887;QD=21.64;ReadPosRankSum=-1.201;VQSLOD=3.2452;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:83.69:0,84,1273	0/0:12,0:12:27.05:0,27,434	0/0:52,0:15:29.60:0,30,352	0/0:66,0:16:32.12:0,32,322	0/0:13,0:13:3.90:0,4,54	0/0:8,0:8:11.77:0,12,156	0/0:35,0:35:43.22:0,43,670	0/0:38,0:34:81.19:0,81,1241	0/0:40,0:39:72.12:0,72,1098	0/0:52,0:48:95.80:0,96,2054	0/0:15,0:15:30.10:0,30,515	0/0:39,0:39:99:0,102,1636	0/0:59,0:59:99:0,165,2704	0/0:58,0:57:99:0,144,2392	1/1:11,23:34:54.14:681,54,0	1/1:14,19:33:60.61:772,61,0	0/0:37,0:36:89.33:0,89,1455	1/1:12,10:22:48.13:615,48,0	0/0:31,0:27:66.21:0,66,1101	0/0:20,0:20:33.11:0,33,564	0/0:145,0:139:99:0,295,4947	0/0:36,0:36:86.43:0,86,1375	0/0:20,0:20:48.16:0,48,819	0/0:59,0:59:99:0,138,2297	0/0:17,0:17:45.12:0,45,718	0/0:26,0:23:54.18:0,54,873	0/0:9,0:9:15.02:0,15,211	0/0:9,0:9:21.07:0,21,362
chr10	15230103	.	C	CAT	275.61	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=3.918;DP=1070;FS=1.105;HRun=0;HaplotypeScore=197.2974;InbreedingCoeff=0.7400;MQ=54.17;MQ0=36;MQRankSum=0.679;QD=3.67;ReadPosRankSum=-2.863;VQSLOD=2.6679;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,103,1505	0/0:10,0:10:24.08:0,24,367	0/1:44,0:13:0.70:1,0,353	0/0:72,0:22:34.86:0,35,325	0/0:1,9:10:0:0,0,0	1/1:3,2:5:2.90:58,3,0	1/1:14,12:25:23.21:325,23,0	0/0:41,0:33:93.14:0,93,1283	0/0:44,0:41:84.25:0,84,1210	0/0:50,0:44:99:0,126,1893	0/0:18,0:18:30.08:0,30,418	0/0:46,0:45:99:0,126,1875	0/0:59,0:59:99:0,165,2461	0/0:57,0:54:99:0,147,2176	0/0:39,0:39:66.65:0,67,943	0/0:37,0:37:83.95:0,84,1239	0/0:46,0:44:99:0,107,1539	0/0:23,0:25:64.22:0,64,839	0/0:27,0:20:54.12:0,54,740	0/0:21,0:21:33.11:0,33,504	0/0:152,0:149:99:0,354,5211	0/0:39,0:39:99:0,111,1560	0/0:24,0:24:66.18:0,66,957	0/0:56,0:57:99:0,144,2177	0/0:15,0:15:42.14:0,42,631	0/0:33,0:26:68.88:0,69,966	0/0:14,0:14:33.09:0,33,481	0/0:16,0:16:35.96:0,36,447
chr10	15230138	.	C	CCA	5467.28	PASS	AB=0.807;AC=14;AF=0.259;AN=54;BaseQRankSum=-1.154;DP=1174;FS=14.469;HRun=0;HaplotypeScore=179.0857;InbreedingCoeff=0.6093;MQ=47.60;MQ0=101;MQRankSum=-3.539;QD=15.62;ReadPosRankSum=1.034;VQSLOD=4.1633;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:40:78.21:0,78,960	0/0:16,0:13:11.63:0,12,152	0/1:46,0:5:0.59:1,0,10	0/0:72,0:10:3.82:0,4,37	./.	0/0:2,0:3:2.98:0,3,35	0/0:5,0:7:2.67:0,3,7	0/1:60,2:44:72.32:339,0,72	0/1:27,17:41:3.81:668,0,4	1/1:32,23:40:85.44:1496,85,0	1/1:11,7:16:18.05:276,18,0	0/0:51,0:51:96.09:0,96,1185	0/0:60,0:58:99:0,132,1602	0/0:52,0:50:99:0,114,1401	0/0:57,0:55:99:0,102,1253	0/0:52,1:47:84.22:0,84,1036	1/1:17,17:34:15.74:798,16,0	0/0:26,0:30:80.44:0,80,939	0/0:24,0:19:41.91:0,42,497	0/0:34,0:26:24.02:0,24,302	0/0:154,0:145:99:0,307,3880	0/0:45,0:42:93.26:0,93,1141	0/0:24,0:22:51.12:0,51,624	0/0:56,0:54:99:0,102,1268	0/0:30,0:28:54.14:0,54,647	1/1:30,16:36:16.42:922,16,0	1/1:8,11:18:41.35:652,41,0	0/1:4,9:11:14.09:316,0,14
chr10	15230176	.	A	ACT	259.30	PASS	AB=0.825;AC=6;AF=0.107;AN=56;BaseQRankSum=6.524;DP=937;FS=4.908;HRun=0;HaplotypeScore=177.8757;InbreedingCoeff=0.6582;MQ=49.42;MQ0=86;MQRankSum=-0.480;QD=3.60;ReadPosRankSum=-4.936;VQSLOD=0.7287;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:87.25:0,87,1202	0/0:8,0:6:9.03:0,9,128	0/1:31,0:5:0.76:1,0,64	0/0:33,0:5:8.58:0,9,73	1/1:5,3:8:5.99:50,6,0	0/1:6,7:13:2.45:182,0,2	1/1:10,10:19:14.67:144,15,0	0/0:23,0:11:33.11:0,33,466	0/0:31,0:22:15.65:0,16,321	0/0:30,0:23:57.17:0,57,782	0/0:4,0:3:9.03:0,9,129	0/0:46,0:45:99:0,114,1538	0/0:43,0:42:99:0,107,1399	0/0:51,0:51:99:0,129,1781	0/0:66,0:62:99:0,114,1538	0/0:54,0:49:99:0,108,1433	0/0:16,0:14:36.12:0,36,512	0/0:31,0:30:56.43:0,56,825	0/0:39,0:17:39.07:0,39,504	0/0:32,0:27:30.08:0,30,412	0/0:136,0:123:99:0,304,4178	0/0:36,0:36:90.25:0,90,1229	0/0:23,0:21:54.15:0,54,732	0/0:52,0:49:99:0,118,1654	0/0:30,0:28:69.22:0,69,958	0/0:25,0:18:32.84:0,33,572	0/0:12,0:10:18.04:0,18,236	0/0:6,0:4:12.01:0,12,150
chr10	15230192	.	ACACT	A	830.55	PASS	AB=0.767;AC=16;AF=0.286;AN=56;BaseQRankSum=3.399;DP=904;FS=5.019;HRun=0;HaplotypeScore=196.8377;InbreedingCoeff=0.7342;MQ=50.71;MQ0=54;MQRankSum=-4.228;QD=7.55;ReadPosRankSum=-3.740;VQSLOD=1.9495;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:75.23:0,75,1781	1/1:5,0:4:2.99:24,3,0	0/0:34,0:8:10.93:0,11,340	0/0:37,0:6:15.05:0,15,288	0/0:13,0:13:15.05:0,15,360	0/0:15,0:15:23.69:0,24,567	0/0:27,0:26:33.09:0,33,824	1/1:12,5:9:20.92:202,21,0	0/1:14,17:20:12.74:94,0,13	1/1:12,4:11:14.98:167,15,0	1/1:3,0:3:8.96:69,9,0	0/0:50,0:49:99:0,123,2925	0/0:42,0:41:99:0,111,2447	0/0:51,0:51:99:0,129,3006	0/0:61,0:58:99:0,118,2534	0/0:52,1:49:99:0,117,2563	0/1:7,1:6:14:18,0,14	0/0:27,0:26:5.79:0,6,973	0/0:37,0:21:57.19:0,57,1380	0/0:32,0:29:42.88:0,43,1004	0/0:134,0:121:99:0,303,7314	0/0:34,0:34:90.22:0,90,2104	0/0:19,0:17:42.11:0,42,965	0/0:54,0:51:98.38:0,98,2607	0/0:37,0:36:86.68:0,87,1991	1/1:14,5:12:20.98:233,21,0	1/1:4,3:5:12.02:164,12,0	1/1:3,1:2:5.98:46,6,0
chr10	15230222	.	A	ACT	15422.10	PASS	AB=1.000;AC=31;AF=0.574;AN=54;BaseQRankSum=-5.299;DP=950;FS=10.488;HRun=0;HaplotypeScore=162.2680;InbreedingCoeff=0.7715;MQ=51.18;MQ0=32;MQRankSum=-3.253;QD=31.60;ReadPosRankSum=0.318;VQSLOD=6.3875;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:35:96.13:0,96,1279	./.	0/0:49,0:7:16.53:0,17,145	0/0:65,0:5:2.82:0,3,40	1/1:5,14:19:21.07:405,21,0	1/1:5,13:18:32.75:577,33,0	1/1:15,23:36:60.39:956,60,0	1/1:15,7:15:36.89:392,37,0	1/1:19,1:12:5.54:36,6,0	0/1:7,0:5:12.98:13,0,26	1/1:3,0:3:2.84:20,3,0	0/0:50,0:50:99:0,133,1819	0/0:51,0:51:99:0,141,1712	0/0:66,0:66:99:0,186,2418	1/1:22,31:51:99:1834,108,0	1/1:18,35:53:99:2345,141,0	1/1:2,0:2:2.47:12,2,0	1/1:9,15:23:62.87:1054,63,0	1/1:12,10:18:51.09:810,51,0	1/1:1,28:29:42.43:803,42,0	1/1:72,89:144:99:6080,352,0	0/0:41,0:41:99:0,120,1637	0/0:15,0:14:36.05:0,36,464	0/0:46,0:46:99:0,118,1703	0/0:35,0:35:87.14:0,87,1148	1/1:13,1:5:7.53:80,8,0	0/0:4,0:2:2.60:0,3,10	1/1:0,0:1:2.22:7,2,0
chr10	15230253	.	TCA	T	2508.06	PASS	AB=0.500;AC=17;AF=0.304;AN=56;BaseQRankSum=8.442;DP=1034;FS=20.791;HRun=0;HaplotypeScore=228.6596;InbreedingCoeff=0.9254;MQ=50.27;MQ0=31;MQRankSum=-9.872;QD=16.72;ReadPosRankSum=-4.272;VQSLOD=1.7765;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:45:99:0,117,1874	1/1:1,5:5:11.55:155,12,0	0/0:33,0:6:12.04:0,12,204	0/0:48,2:13:19.63:0,20,281	0/0:32,0:27:20.18:0,20,357	0/0:23,0:23:60.21:0,60,1006	0/0:37,0:35:54.02:0,54,835	1/1:11,35:33:69.10:854,69,0	1/1:7,17:17:21.53:273,22,0	1/1:6,20:22:51.13:642,51,0	0/1:0,5:5:0.05:0,0,0	0/0:51,0:51:99:0,129,2022	0/0:56,0:55:99:0,147,2338	0/0:61,0:61:99:0,153,2504	0/0:55,0:54:99:0,129,2080	0/0:53,0:52:99:0,120,1964	1/1:3,3:6:7.88:57,8,0	0/0:27,0:26:69.21:0,69,1132	0/0:36,0:28:66.13:0,66,949	0/0:31,0:30:53.79:0,54,860	0/0:146,0:139:99:0,352,5577	0/0:44,0:44:99:0,123,2020	0/0:27,0:25:57.17:0,57,916	0/0:49,1:49:99:0,123,2010	0/0:26,0:26:54.14:0,54,847	1/1:6,16:14:26.44:383,26,0	1/1:3,6:7:15.05:193,15,0	1/1:1,4:5:5.80:147,6,0
chr10	15230282	.	A	AACTC	7669.37	PASS	AB=0.780;AC=16;AF=0.286;AN=56;BaseQRankSum=11.896;DP=1016;FS=3.788;HRun=0;HaplotypeScore=263.9493;InbreedingCoeff=0.8113;MQ=52.65;MQ0=17;MQRankSum=-14.715;QD=42.14;ReadPosRankSum=-3.064;VQSLOD=4.2632;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:51:99:0,141,2389	1/1:3,4:6:15.05:348,15,0	0/0:35,0:15:28.31:0,28,561	0/0:46,0:18:32.07:0,32,497	0/0:37,0:34:23.88:0,24,308	0/0:23,0:23:60.19:0,60,1041	0/0:39,0:38:98.99:0,99,1543	1/1:36,12:34:75.39:1501,75,0	1/1:10,15:22:57.16:1235,57,0	1/1:12,26:36:90.27:2267,90,0	1/1:1,7:7:11.83:259,12,0	0/0:42,0:42:99:0,107,1883	0/0:51,0:51:99:0,121,2150	0/0:56,0:56:99:0,138,2269	0/0:52,0:51:99:0,111,1834	0/0:47,0:46:99:0,120,2078	0/1:5,3:8:29.29:112,0,29	0/0:28,0:27:62.38:0,62,1123	0/0:28,0:26:72.18:0,72,1157	0/0:28,0:28:60.10:0,60,1050	0/0:134,0:130:99:0,331,5768	0/0:41,0:41:95.34:0,95,1690	0/0:27,0:27:75.13:0,75,1293	0/0:47,0:47:99:0,114,1889	0/0:21,0:21:47.95:0,48,709	1/1:12,14:20:12.50:1020,12,0	1/1:4,13:15:26.16:855,26,0	0/1:4,1:5:21.83:72,0,22
chr10	15230360	.	CAT	C	1290.82	PASS	AB=0.975;AC=7;AF=0.125;AN=56;BaseQRankSum=6.066;DP=1301;FS=0.000;HRun=0;HaplotypeScore=263.1136;InbreedingCoeff=0.7838;MQ=48.99;MQ0=68;MQRankSum=1.056;QD=10.76;ReadPosRankSum=-0.751;VQSLOD=2.4451;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:62,0:61:99:0,162,2985	0/0:29,0:28:32.31:0,32,634	0/1:38,1:5:36.99:37,0,49	0/0:29,0:3:6.02:0,6,105	1/1:2,16:18:18.06:257,18,0	1/1:4,16:19:24.55:344,25,0	1/1:9,34:39:60.62:800,61,0	0/0:70,0:49:99:0,131,2338	0/0:75,0:62:87.88:0,88,1675	0/0:84,0:73:99:0,184,3652	0/0:35,0:32:29.23:0,29,577	0/0:47,0:47:99:0,126,2284	0/0:45,0:44:99:0,126,2365	0/0:57,0:57:99:0,159,2934	0/0:61,1:61:93.74:0,94,1937	0/0:62,0:59:99:0,132,2353	0/0:40,0:39:99:0,99,1865	0/0:31,1:31:7.38:0,7,1336	0/0:28,1:19:51.64:0,52,938	0/0:23,0:20:38.87:0,39,728	0/0:129,0:122:99:0,312,5741	0/0:43,0:43:99:0,117,2125	0/0:30,0:29:75.04:0,75,1400	0/0:56,0:55:99:0,144,2754	0/0:37,0:37:99:0,99,1878	0/0:55,0:45:99:0,129,2425	0/0:30,0:27:60.15:0,60,1095	0/0:18,0:14:24.08:0,24,462
chr10	15230410	.	TCA	T	7854.36	PASS	AB=0.864;AC=13;AF=0.232;AN=56;BaseQRankSum=6.143;DP=1225;FS=5.242;HRun=0;HaplotypeScore=268.8436;InbreedingCoeff=0.7216;MQ=51.57;MQ0=26;MQRankSum=4.549;QD=19.11;ReadPosRankSum=1.535;VQSLOD=4.3437;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:56:99:0,135,2106	0/0:12,0:12:10.73:0,11,101	0/1:37,0:16:1.67:2,0,452	0/0:56,2:15:21.19:0,21,364	0/0:24,0:24:42.11:0,42,680	0/0:31,0:30:51.13:0,51,803	0/0:52,1:51:72.48:0,72,1708	0/0:50,0:39:10.17:0,10,796	0/0:37,1:37:2.83:0,3,407	0/0:65,0:60:98.14:0,98,1501	0/0:26,0:25:19.99:0,20,200	0/0:56,0:56:99:0,166,2710	0/0:48,0:48:99:0,114,1867	0/0:47,0:47:99:0,111,1820	1/1:5,57:60:99:1365,105,0	1/1:5,68:73:99:1794,138,0	0/1:24,0:24:1.52:2,0,318	0/1:8,18:25:22.44:603,0,22	1/1:15,9:17:36.10:440,36,0	1/1:4,27:30:48.16:625,48,0	1/1:53,79:129:99:3024,206,0	0/0:53,0:53:99:0,145,2348	0/0:26,1:27:23.87:0,24,877	0/0:53,0:52:99:0,132,2123	0/0:41,0:41:81.71:0,82,1311	0/0:43,0:37:42.02:0,42,811	0/0:15,0:14:14.93:0,15,153	0/0:17,0:15:23.82:0,24,250
chr10	15230412	.	A	ACT	3092.83	PASS	AB=0.736;AC=9;AF=0.161;AN=56;BaseQRankSum=3.801;DP=1192;FS=3.616;HRun=0;HaplotypeScore=287.0842;InbreedingCoeff=-0.1994;MQ=51.20;MQ0=24;MQRankSum=-3.185;QD=11.45;ReadPosRankSum=-1.703;VQSLOD=2.6633;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:58:99:0,150,2038	0/1:6,5:11:55:157,0,55	0/0:37,0:16:38.61:0,39,478	0/0:54,0:13:4.18:0,4,369	0/0:24,0:24:42.11:0,42,615	0/0:32,0:31:51.13:0,51,741	0/0:53,0:51:99:0,111,1603	0/1:36,6:32:45.61:46,0,889	0/1:27,11:36:99:358,0,270	0/1:43,16:56:99:744,0,1162	0/1:10,15:24:70.90:268,0,71	0/0:57,0:57:99:0,166,2483	0/0:45,0:45:99:0,126,1804	0/0:44,0:44:99:0,114,1677	0/0:64,0:62:99:0,109,579	0/0:73,0:72:99:0,123,639	0/1:13,9:22:99:459,0,177	0/0:26,0:25:15.29:0,15,232	0/0:21,0:16:23.56:0,24,206	0/0:30,0:29:44.52:0,45,244	0/0:130,1:127:99:0,102,1181	0/0:53,0:53:99:0,154,2211	0/0:27,0:27:65.75:0,66,881	0/0:53,0:52:99:0,144,2037	0/0:40,0:40:93.69:0,94,1292	0/1:27,15:36:99:780,0,411	0/1:10,4:13:99:144,0,152	0/1:8,9:15:99:278,0,129
chr10	15230420	.	ACT	A	2345.57	PASS	AB=0.979;AC=11;AF=0.196;AN=56;BaseQRankSum=14.320;DP=1095;FS=1.980;HRun=0;HaplotypeScore=277.7424;InbreedingCoeff=0.3771;MQ=52.94;MQ0=17;MQRankSum=1.592;QD=5.89;ReadPosRankSum=5.471;VQSLOD=2.8862;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:52:99:0,139,2428	0/0:10,0:10:3.23:0,3,122	0/0:31,0:16:35.72:0,36,544	0/0:42,0:14:26.73:0,27,437	0/0:25,0:25:50.73:0,51,852	0/0:33,0:32:54.10:0,54,963	0/0:52,0:50:86.56:0,87,2042	0/0:29,0:23:45.46:0,45,861	0/0:30,0:29:26.49:0,26,574	0/1:47,1:45:29.04:29,0,1505	0/0:21,0:20:18.87:0,19,251	0/0:58,0:58:99:0,168,3081	0/0:41,0:41:99:0,123,2174	0/0:45,0:45:99:0,123,2146	1/1:63,0:62:32.51:427,33,0	1/1:74,0:73:47.54:559,48,0	0/1:19,2:21:39.51:40,0,390	0/1:22,0:21:66.17:204,0,66	0/1:19,0:16:43.70:88,0,44	0/1:31,0:30:17.83:171,0,18	1/1:119,0:119:99:993,143,0	0/0:49,0:49:99:0,145,2600	0/0:26,1:27:51.60:0,52,1069	0/0:53,0:52:99:0,141,2462	0/0:35,0:36:89.70:0,90,1564	0/0:36,0:33:1.85:0,2,799	0/0:9,0:9:15.89:0,16,186	0/0:16,0:14:10.80:0,11,272
chr10	15230524	.	CACAA	C	4353.13	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=8.851;DP=1147;FS=0.000;HRun=0;HaplotypeScore=275.9276;InbreedingCoeff=0.9995;MQ=52.41;MQ0=33;MQRankSum=-6.391;QD=21.13;ReadPosRankSum=-3.478;VQSLOD=3.6255;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:73,0:72:99:0,201,5038	0/0:12,0:11:33.08:0,33,778	0/0:85,0:26:53.86:0,54,1091	0/0:85,0:18:35.15:0,35,702	0/0:25,0:25:52.02:0,52,1197	0/0:21,0:21:54.08:0,54,1141	0/0:48,0:47:99:0,123,2651	0/0:65,0:54:99:0,113,3286	0/0:32,0:30:77.64:0,78,1585	0/0:60,0:56:99:0,162,3798	0/0:22,0:21:52.86:0,53,1241	0/0:53,0:53:99:0,144,3473	0/0:35,0:34:66.35:0,66,2015	0/0:48,0:48:99:0,115,3272	1/1:8,31:38:61.28:1004,61,0	1/1:5,29:30:69.94:1130,70,0	0/0:33,0:32:61.73:0,62,2228	1/1:5,7:10:27.02:447,27,0	1/1:13,12:19:38.91:760,39,0	1/1:10,19:27:28.82:404,29,0	1/1:37,29:61:37.81:609,38,0	0/0:51,0:51:99:0,138,3055	0/0:30,0:30:81.25:0,81,2032	0/0:61,0:61:99:0,163,4022	0/0:27,0:27:76.09:0,76,1873	0/0:38,0:35:99:0,99,2467	0/0:20,0:20:51.08:0,51,1185	0/0:17,0:17:45.11:0,45,1050
chr10	15230526	.	CA	C	244.12	PASS	AB=0.960;AC=8;AF=0.143;AN=56;BaseQRankSum=11.172;DP=1148;FS=0.465;HRun=3;HaplotypeScore=246.3924;InbreedingCoeff=0.3435;MQ=52.39;MQ0=34;MQRankSum=-4.858;QD=1.16;ReadPosRankSum=0.605;VQSLOD=-0.7283;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:72,0:71:99:0,204,2861	0/0:12,0:11:30.09:0,30,413	0/0:82,0:24:53.55:0,54,705	0/0:87,0:18:28.84:0,29,409	0/0:25,0:25:47.04:0,47,643	0/0:21,0:21:51.17:0,51,715	0/0:48,0:47:99:0,108,1481	0/0:62,0:52:99:0,137,1875	0/0:32,0:29:72.05:0,72,989	0/0:60,0:56:99:0,163,2258	0/0:23,0:22:49.09:0,49,675	0/0:51,0:51:99:0,138,1947	0/0:37,0:36:86.48:0,86,1193	0/0:46,0:46:99:0,113,1773	0/1:39,0:39:11.91:57,0,12	1/1:33,2:31:11.25:121,11,0	0/0:34,0:33:88.37:0,88,1281	1/1:10,3:11:2.87:99,3,0	0/1:24,1:19:37.07:55,0,37	0/1:27,1:26:15.71:16,0,55	0/1:66,2:64:32.03:32,0,146	0/0:52,0:52:99:0,137,1811	0/0:30,0:30:81.26:0,81,1133	0/0:60,0:60:99:0,159,2251	0/0:27,0:27:75.71:0,76,1059	0/0:39,0:36:99:0,99,1380	0/0:20,0:20:48.12:0,48,663	0/0:17,0:17:42.14:0,42,597
chr10	15230544	.	TCA	T	12909.37	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=12.100;DP=1125;FS=4.085;HRun=0;HaplotypeScore=223.5487;InbreedingCoeff=0.9809;MQ=50.62;MQ0=36;MQRankSum=-7.456;QD=21.06;ReadPosRankSum=-4.942;VQSLOD=3.9346;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:69,0:68:99:0,180,2844	1/1:4,6:9:15:172,15,0	0/0:74,0:19:20.96:0,21,258	0/0:86,1:13:5.96:0,6,61	1/1:4,20:24:38.99:496,39,0	1/1:4,17:21:36.11:455,36,0	1/1:17,26:43:76.62:1171,77,0	1/1:40,26:48:56.97:892,57,0	1/1:13,23:31:75.02:942,75,0	1/1:18,31:48:99:1255,102,0	1/1:3,18:20:35.66:457,36,0	0/0:49,0:48:99:0,126,1999	0/0:41,0:40:99:0,102,1630	0/0:37,0:37:99:0,105,1675	1/1:16,26:41:67.96:833,68,0	1/1:21,17:36:62.85:791,63,0	1/1:18,20:37:83.52:1046,84,0	1/1:8,8:16:36.11:451,36,0	1/1:15,14:24:32.88:560,33,0	1/1:5,15:18:26.39:335,26,0	1/1:52,27:75:32.61:906,33,0	0/0:52,0:52:99:0,123,1955	0/0:23,0:23:54.18:0,54,897	0/0:56,1:57:99:0,107,2304	0/0:21,0:21:54.18:0,54,894	1/1:19,23:39:87.28:1101,87,0	1/1:9,13:22:45.13:550,45,0	1/1:0,17:17:39.12:496,39,0
chr10	15230610	.	A	ACT	511.74	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=6.729;DP=1122;FS=0.000;HRun=0;HaplotypeScore=267.3529;InbreedingCoeff=0.8354;MQ=49.82;MQ0=25;MQRankSum=-4.456;QD=4.97;ReadPosRankSum=-4.497;VQSLOD=1.7042;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:69,0:69:99:0,192,2753	0/0:16,0:16:11.32:0,11,426	0/1:18,0:4:2.12:2,0,73	0/0:38,0:10:16.61:0,17,254	1/1:11,10:19:5.83:50,6,0	1/1:12,11:20:18.55:268,19,0	1/1:25,16:39:20.60:325,21,0	0/0:51,0:41:99:0,116,1488	0/0:42,0:39:65.52:0,66,822	0/0:46,0:43:99:0,117,1634	0/0:23,0:23:33.11:0,33,515	0/0:54,0:54:99:0,141,2091	0/0:41,0:41:99:0,117,1681	0/0:43,0:43:99:0,102,1463	0/0:47,0:46:62.87:0,63,925	0/0:51,0:51:99:0,120,1800	0/0:29,0:29:56.36:0,56,777	0/0:33,0:33:79.49:0,79,1206	0/0:24,0:16:45.14:0,45,667	0/0:32,0:32:60.19:0,60,893	0/0:142,0:135:99:0,248,3625	0/0:48,0:48:99:0,126,1751	0/0:27,0:26:72.20:0,72,1035	0/0:51,0:50:99:0,135,1937	0/0:28,0:27:72.21:0,72,1042	0/0:42,0:40:97.82:0,98,1349	0/0:27,0:27:58.70:0,59,773	0/0:15,0:14:24:0,24,269
chr10	15230618	.	ACT	A	450.71	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=11.257;DP=1097;FS=20.306;HRun=0;HaplotypeScore=260.0940;InbreedingCoeff=0.8014;MQ=50.06;MQ0=14;MQRankSum=-9.317;QD=3.95;ReadPosRankSum=-6.354;VQSLOD=0.4635;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:68,0:67:99:0,192,3330	0/0:13,0:13:27.06:0,27,513	0/0:19,0:5:10.38:0,10,97	0/0:24,1:10:17.22:0,17,312	1/1:17,1:17:5.98:47,6,0	1/1:25,1:23:37.97:257,38,0	1/1:35,6:39:41.19:278,41,0	0/0:50,0:39:79.16:0,79,1465	0/0:41,0:38:17.12:0,17,796	0/0:40,0:37:99:0,105,1761	0/0:25,0:25:33.01:0,33,616	0/0:55,0:55:99:0,145,2582	0/0:41,0:41:99:0,111,1934	0/0:46,0:46:99:0,99,1876	0/0:46,0:45:65.96:0,66,1121	0/0:51,0:50:99:0,126,2250	0/1:29,0:29:5.86:6,0,843	0/0:35,0:35:78.32:0,78,1567	0/0:24,0:18:51.14:0,51,899	0/0:30,0:30:63.10:0,63,1035	0/0:147,0:140:99:0,257,4483	0/0:40,0:40:99:0,108,1963	0/0:31,0:30:87.02:0,87,1294	0/0:50,0:49:99:0,129,2242	0/0:30,0:30:83.69:0,84,1352	0/0:39,0:37:41.64:0,42,1453	0/0:25,0:25:12.96:0,13,740	0/0:12,0:11:17.98:0,18,256
chr10	15230619	.	C	CCA	38.16	PASS	AB=0.676;AC=3;AF=0.054;AN=56;BaseQRankSum=7.056;DP=1091;FS=6.958;HRun=0;HaplotypeScore=265.2248;InbreedingCoeff=0.5035;MQ=50.22;MQ0=14;MQRankSum=-4.434;QD=0.67;ReadPosRankSum=-6.123;VQSLOD=0.3240;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:71,0:70:99:0,192,3071	0/0:13,0:13:26.92:0,27,442	0/0:20,0:6:1.02:0,1,161	0/0:24,0:11:24.06:0,24,338	0/0:7,7:16:5.40:0,5,42	0/1:12,11:20:42.52:43,0,53	1/1:18,14:33:19.87:99,20,0	0/0:50,0:39:99:0,107,1649	0/0:41,0:38:62.47:0,62,817	0/0:41,0:38:99:0,105,1670	0/0:25,0:25:33.11:0,33,550	0/0:57,0:57:99:0,141,2239	0/0:42,0:42:99:0,111,1789	0/0:46,0:46:99:0,106,1699	0/0:48,0:47:67.86:0,68,1071	0/0:51,0:50:99:0,126,1989	0/0:29,0:29:68.78:0,69,904	0/0:34,0:34:89.97:0,90,1383	0/0:24,0:18:51.17:0,51,826	0/0:31,0:31:57.16:0,57,882	0/0:146,0:139:99:0,258,4128	0/0:39,0:39:99:0,108,1743	0/0:31,0:30:87.30:0,87,1368	0/0:48,0:47:99:0,129,2057	0/0:30,0:30:84.26:0,84,1302	0/0:40,0:39:98.44:0,98,1444	0/0:25,0:25:58.23:0,58,798	0/0:11,0:10:15.05:0,15,233
chr10	15230620	.	T	TA	230.56	PASS	AB=0.703;AC=3;AF=0.054;AN=56;BaseQRankSum=10.459;DP=1087;FS=11.308;HRun=0;HaplotypeScore=248.1537;InbreedingCoeff=0.6071;MQ=50.25;MQ0=13;MQRankSum=-7.677;QD=3.84;ReadPosRankSum=-5.583;VQSLOD=1.1155;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:71,0:70:99:0,196,2687	0/0:13,0:13:20.30:0,20,368	0/0:18,0:6:6.27:0,6,168	0/0:24,0:11:24.07:0,24,305	0/0:11,7:17:4.27:0,4,15	0/1:15,11:23:7.83:183,0,8	1/1:20,14:33:26.56:153,27,0	0/0:50,0:39:99:0,107,1364	0/0:42,0:39:45.34:0,45,631	0/0:41,0:38:99:0,108,1476	0/0:24,0:24:33:0,33,466	0/0:55,0:55:99:0,142,1949	0/0:42,0:42:99:0,111,1540	0/0:45,0:45:99:0,104,1486	0/0:48,0:47:68.12:0,68,940	0/0:50,0:49:99:0,123,1716	0/0:28,0:28:25.01:0,25,727	0/0:34,0:34:92.49:0,92,1243	0/0:25,0:19:54.18:0,54,755	0/0:29,0:29:56.89:0,57,753	0/0:147,0:140:99:0,261,3621	0/0:41,0:41:99:0,109,1505	0/0:31,0:30:87.29:0,87,1202	0/0:48,0:47:99:0,126,1755	0/0:30,0:30:84.28:0,84,1170	0/0:38,0:37:71.91:0,72,1195	0/0:24,0:24:47.66:0,48,655	0/0:11,0:10:18.02:0,18,228
chr10	15230646	.	ACACT	A	4665.10	PASS	AB=0.657;AC=14;AF=0.250;AN=56;BaseQRankSum=7.651;DP=1035;FS=6.347;HRun=0;HaplotypeScore=273.2214;InbreedingCoeff=0.6132;MQ=52.07;MQ0=21;MQRankSum=-8.941;QD=22.11;ReadPosRankSum=-0.564;VQSLOD=3.6573;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:66,0:65:99:0,159,3693	1/1:5,7:12:21.07:368,21,0	0/0:30,0:12:27.02:0,27,487	0/0:37,0:18:35.75:0,36,734	0/0:19,0:18:27.01:0,27,465	0/0:25,0:22:44.37:0,44,981	0/0:23,0:22:24.02:0,24,517	1/1:31,6:25:30.01:457,30,0	0/1:12,19:31:44.66:367,0,45	1/1:5,22:25:57.15:954,57,0	1/1:8,12:20:15.05:267,15,0	0/0:55,0:55:99:0,136,2955	0/0:38,0:38:89.61:0,90,2049	0/0:53,0:53:99:0,129,2833	0/0:43,0:42:56.97:0,57,1402	0/0:39,0:38:99:0,99,2438	0/1:13,9:22:99:408,0,135	0/0:35,0:35:80.81:0,81,1936	0/0:31,0:24:46.18:0,46,1256	0/0:35,0:35:68.96:0,69,1494	0/0:139,0:135:99:0,248,6234	0/0:41,0:41:96.23:0,96,2214	0/0:25,0:25:66.23:0,66,1624	0/0:57,0:57:99:0,141,3280	0/0:33,0:33:93.32:0,93,2403	0/1:19,16:33:44.63:975,0,45	0/1:7,12:19:20.84:545,0,21	1/1:0,8:8:18.06:324,18,0
chr10	15230652	.	ACT	A	551.70	PASS	AB=0.993;AC=13;AF=0.232;AN=56;BaseQRankSum=11.873;DP=1001;FS=6.707;HRun=0;HaplotypeScore=250.5766;InbreedingCoeff=0.4998;MQ=52.29;MQ0=24;MQRankSum=-7.376;QD=2.81;ReadPosRankSum=1.698;VQSLOD=1.8496;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:63,0:62:99:0,169,3173	1/1:11,0:11:19.49:103,19,0	0/0:29,0:11:26.97:0,27,416	0/0:36,0:17:41.93:0,42,696	0/0:21,0:20:32.74:0,33,559	0/0:24,0:21:48.16:0,48,908	0/0:21,0:20:29.97:0,30,562	1/1:28,0:15:21.95:113,22,0	0/1:33,0:33:34.82:35,0,105	0/1:26,1:25:9.91:120,0,10	1/1:21,0:21:13.46:66,13,0	0/0:54,0:54:99:0,150,2785	0/0:35,0:35:93.30:0,93,1714	0/0:50,0:50:99:0,129,2383	0/0:41,0:41:63.52:0,64,1182	0/0:41,0:40:99:0,108,2027	0/1:19,0:19:45.54:46,0,195	0/0:36,0:36:96.06:0,96,1664	0/0:33,0:26:52.26:0,52,1221	0/0:35,0:35:72.21:0,72,1324	0/0:131,7:134:99:0,209,5367	0/0:33,0:33:96.33:0,96,1835	0/0:25,0:25:75.24:0,75,1414	0/0:57,0:57:99:0,147,2773	0/0:32,0:32:96.33:0,96,1854	0/1:31,0:29:99:109,0,113	0/1:18,0:18:38.73:68,0,39	1/1:8,0:8:15.88:67,16,0
chr10	15230676	.	CCA	C	8038.11	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=5.544;DP=957;FS=3.499;HRun=0;HaplotypeScore=218.4792;InbreedingCoeff=0.8723;MQ=49.22;MQ0=35;MQRankSum=0.063;QD=20.93;ReadPosRankSum=0.451;VQSLOD=4.5686;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:64,1:64:99:0,144,2452	0/0:4,0:6:5.83:0,6,32	0/0:36,0:5:9.03:0,9,131	0/0:41,0:10:15.05:0,15,226	1/1:6,14:20:42.13:524,42,0	1/1:8,19:24:47.93:562,48,0	1/1:16,11:26:47.82:575,48,0	0/0:22,0:13:17.99:0,18,183	0/0:14,1:33:18.77:0,19,135	0/0:10,0:17:27.79:0,28,222	0/1:9,0:14:28.28:28,0,44	0/0:46,0:45:99:0,117,1861	0/0:35,0:35:84.24:0,84,1326	0/0:40,0:40:99:0,99,1635	1/1:5,34:39:42.11:534,42,0	1/1:13,21:33:72.23:913,72,0	0/0:14,0:21:5.93:0,6,159	1/1:15,19:32:51.82:762,52,0	1/1:16,19:28:28.46:557,28,0	1/1:5,29:34:45.14:573,45,0	1/1:45,74:118:99:3008,249,0	0/0:32,0:32:93.32:0,93,1544	0/0:25,0:25:63.22:0,63,1044	0/0:62,1:64:99:0,134,2567	0/0:31,0:31:40.34:0,40,1190	0/0:11,0:28:52.53:0,53,431	0/0:8,0:14:19.06:0,19,139	0/0:1,0:6:14.66:0,15,102
chr10	15230708	.	CACACAA	C	3711.97	PASS	AB=0.678;AC=14;AF=0.250;AN=56;BaseQRankSum=7.596;DP=951;FS=13.207;HRun=0;HaplotypeScore=290.1170;InbreedingCoeff=0.6386;MQ=51.57;MQ0=35;MQRankSum=-11.672;QD=26.90;ReadPosRankSum=-2.819;VQSLOD=1.8527;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:58:99:0,127,4538	1/1:0,6:5:8.86:155,9,0	0/0:62,0:8:14.26:0,14,213	0/0:71,0:12:11.81:0,12,121	0/0:22,0:22:64.98:0,65,1931	0/0:23,0:22:56.32:0,56,1478	0/0:32,0:32:61.77:0,62,2414	1/1:4,21:20:53.92:852,54,0	1/1:9,17:25:31.21:540,31,0	0/1:9,11:15:16.79:605,0,17	0/1:7,2:9:0:0,0,0	0/0:46,0:45:99:0,128,3764	0/0:23,0:23:63.16:0,63,1790	0/0:40,0:40:99:0,116,3408	0/0:31,0:30:26.04:0,26,1118	0/0:26,0:25:67.69:0,68,1804	0/1:6,9:15:8.33:281,0,8	0/0:27,0:25:55.31:0,55,1549	0/0:31,0:20:48.16:0,48,1463	0/0:27,0:27:69.85:0,70,2106	0/0:129,0:126:99:0,309,9070	0/0:37,0:37:99:0,99,3008	0/0:22,0:22:51.09:0,51,1537	0/0:69,0:68:99:0,170,5204	0/0:34,0:34:93.23:0,93,2874	0/1:10,14:23:49.85:1001,0,50	1/1:3,1:4:2.94:18,3,0	1/1:2,6:8:17.84:260,18,0
chr10	15230738	.	TCACTCA	T	1133.68	PASS	AB=0.870;AC=5;AF=0.093;AN=54;BaseQRankSum=4.114;DP=816;FS=0.000;HRun=0;HaplotypeScore=259.3221;InbreedingCoeff=0.6918;MQ=52.34;MQ0=22;MQRankSum=-2.622;QD=15.75;ReadPosRankSum=-3.467;VQSLOD=2.3328;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,116,3191	0/0:6,0:5:9.36:0,9,89	0/0:51,0:12:10.56:0,11,149	0/0:75,0:13:29.58:0,30,390	0/0:20,0:20:51.16:0,51,1527	0/0:15,0:15:27.03:0,27,704	0/0:32,0:32:63.09:0,63,1566	0/0:37,0:30:74.39:0,74,783	0/0:23,0:22:9.73:0,10,141	0/0:26,0:22:27.04:0,27,348	./.	0/0:35,0:34:93.04:0,93,2460	0/0:19,0:19:44.40:0,44,1533	0/0:35,0:35:78.20:0,78,2366	1/1:15,11:23:15.11:231,15,0	1/1:12,14:24:35.62:584,36,0	0/0:13,0:13:11.85:0,12,127	0/1:17,3:18:34.97:445,0,35	0/0:17,0:12:29.99:0,30,307	0/0:25,0:24:48.10:0,48,617	0/0:92,0:88:99:0,188,2394	0/0:29,0:28:69.21:0,69,1964	0/0:16,0:16:45.12:0,45,1039	0/0:63,0:62:99:0,140,4392	0/0:27,0:27:59.91:0,60,1885	0/0:23,0:22:62.03:0,62,608	0/0:6,0:6:8.50:0,8,56	0/0:8,0:7:20.75:0,21,139
chr10	15230742	.	TCA	T	4734.89	PASS	AB=0.816;AC=26;AF=0.481;AN=54;BaseQRankSum=11.184;DP=818;FS=9.893;HRun=0;HaplotypeScore=203.4301;InbreedingCoeff=0.4749;MQ=51.95;MQ0=25;MQRankSum=-5.275;QD=11.66;ReadPosRankSum=-0.528;VQSLOD=3.6237;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:47:99:0,108,1621	0/1:2,3:5:16.58:34,0,17	0/1:47,0:12:2.99:3,0,41	0/0:74,1:15:17.13:0,17,162	0/0:22,1:23:26.25:0,26,689	0/0:14,2:16:18.06:0,18,286	0/0:32,0:32:22.20:0,22,643	1/1:26,11:29:16.84:482,17,0	1/1:8,13:21:8.72:66,9,0	1/1:11,19:24:6.29:475,6,0	./.	0/0:35,0:35:78.23:0,78,1221	0/0:21,0:21:50.73:0,51,788	0/0:36,0:36:75.11:0,75,1149	1/1:26,1:25:0.85:44,1,0	1/1:27,0:25:0.82:94,1,0	0/1:7,5:13:26.54:27,0,41	0/1:18,1:17:19.81:78,0,20	1/1:12,4:11:18.06:228,18,0	1/1:7,14:20:39.12:496,39,0	1/1:47,40:84:99:1969,162,0	0/0:34,0:32:66.17:0,66,1035	0/1:18,0:18:11.34:11,0,334	0/0:61,0:60:99:0,129,2060	0/0:26,0:26:55.77:0,56,943	0/1:10,13:22:12.98:426,0,13	1/1:3,3:6:5.98:69,6,0	1/1:0,8:7:21.05:232,21,0
chr10	15230753	.	CACT	C	453.03	PASS	AB=0.966;AC=7;AF=0.130;AN=54;BaseQRankSum=9.278;DP=822;FS=6.484;HRun=0;HaplotypeScore=215.3495;InbreedingCoeff=0.1618;MQ=45.39;MQ0=37;MQRankSum=-9.753;QD=3.68;ReadPosRankSum=2.309;VQSLOD=2.0835;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,109,2461	0/0:8,0:6:0.43:0,0,33	0/0:45,0:7:15.39:0,15,189	0/0:73,0:12:24.07:0,24,389	0/0:23,0:23:45.62:0,46,1035	0/0:19,0:18:22.94:0,23,454	0/0:25,0:25:45.05:0,45,1043	0/1:34,1:24:99:114,0,171	0/0:16,0:15:1.05:0,1,12	0/1:31,0:25:99:156,0,119	./.	0/0:31,0:30:90.31:0,90,2042	0/0:29,0:28:65.01:0,65,1362	0/0:42,0:42:88.33:0,88,1850	0/0:33,0:30:9.69:0,10,79	0/0:34,0:32:40.46:0,40,304	0/0:9,0:9:9.84:0,10,110	0/1:16,2:16:70.26:70,0,262	0/0:19,0:13:27.58:0,28,222	0/0:24,0:23:48:0,48,290	0/0:83,1:78:99:0,141,616	0/0:37,0:35:72.25:0,72,1607	0/0:16,0:16:35.69:0,36,682	0/0:57,0:55:99:0,141,3210	0/0:24,0:23:40.84:0,41,1391	0/1:21,0:21:99:108,0,166	0/1:7,0:7:6.09:22,0,6	1/1:10,0:7:20.35:115,20,0
chr10	15230756	.	TCA	T	1503.29	PASS	AB=0.735;AC=11;AF=0.204;AN=54;BaseQRankSum=7.557;DP=826;FS=11.389;HRun=0;HaplotypeScore=203.6750;InbreedingCoeff=0.3938;MQ=45.13;MQ0=38;MQRankSum=-10.192;QD=10.30;ReadPosRankSum=-1.387;VQSLOD=1.9205;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:83.60:0,84,1291	0/1:7,2:7:12.90:13,0,33	0/0:44,0:7:11.40:0,11,138	0/0:68,0:11:17.52:0,18,188	0/0:23,0:22:33.07:0,33,497	0/0:20,0:19:17.56:0,18,260	0/0:23,0:23:33.11:0,33,534	1/1:20,16:25:38.95:448,39,0	1/1:5,12:16:2.92:17,3,0	0/1:14,18:26:3.85:479,0,4	./.	0/0:33,0:32:83.01:0,83,1283	0/0:34,0:33:59.34:0,59,838	0/0:40,0:40:63.16:0,63,1003	0/0:31,0:28:2.66:0,3,18	0/0:35,0:33:25.85:0,26,155	0/1:7,3:10:25.09:25,0,25	0/0:18,0:16:11.45:0,11,93	0/0:18,0:11:18.65:0,19,181	0/0:28,0:27:37.14:0,37,241	0/0:82,0:76:99:0,100,519	0/0:36,0:34:48.16:0,48,784	0/0:17,0:17:27.98:0,28,448	0/0:57,0:55:99:0,116,1871	0/0:24,0:23:46.73:0,47,810	0/1:11,13:22:28.31:382,0,28	0/1:6,2:7:13.04:59,0,13	1/1:3,7:7:21.05:235,21,0
chr10	15230767	.	CAT	C	894.60	PASS	AB=0.997;AC=16;AF=0.296;AN=54;BaseQRankSum=10.395;DP=811;FS=23.016;HRun=0;HaplotypeScore=198.3115;InbreedingCoeff=0.1560;MQ=43.64;MQ0=35;MQRankSum=-7.202;QD=3.06;ReadPosRankSum=-3.256;VQSLOD=0.8696;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:49.74:0,50,1390	1/1:7,1:6:8.98:41,9,0	0/0:33,0:5:10.28:0,10,148	0/0:46,0:8:10.95:0,11,192	0/0:21,0:20:28.31:0,28,487	0/1:22,0:20:24.69:25,0,271	0/0:25,0:24:35.65:0,36,578	0/1:33,0:19:38.97:139,0,39	0/1:18,0:17:8.05:8,0,11	0/1:32,0:27:0.66:212,0,1	./.	0/0:37,0:36:48.15:0,48,1290	0/0:36,0:35:21.76:0,22,832	0/0:40,0:39:58.41:0,58,1066	0/1:32,1:30:18.45:18,0,25	0/1:36,0:34:87.24:87,0,134	0/1:14,0:14:2.57:59,0,3	0/1:16,0:14:40.89:41,0,96	0/0:19,0:11:20.02:0,20,304	0/1:25,0:24:26.46:26,0,404	0/0:82,0:76:47:0,47,1287	0/0:33,0:31:46.71:0,47,861	0/0:22,0:22:11.57:0,12,480	0/0:56,1:53:57.87:0,58,1820	0/0:23,0:22:43.59:0,44,802	0/1:27,0:22:8.58:172,0,9	1/1:11,2:12:0.55:68,1,0	1/1:14,0:12:26.32:159,26,0
chr10	15230780	.	T	TCA	2329.08	PASS	AB=0.895;AC=41;AF=0.788;AN=52;BaseQRankSum=-0.348;DP=838;FS=0.000;HRun=0;HaplotypeScore=213.8667;InbreedingCoeff=-0.2061;MQ=43.65;MQ0=31;MQRankSum=1.449;QD=3.03;ReadPosRankSum=-0.069;VQSLOD=2.5679;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:36,3:39:58.40:196,0,58	1/1:8,0:6:3.47:26,3,0	0/1:23,0:4:0:0,0,0	./.	1/1:18,0:18:4.49:27,4,0	0/1:25,0:24:1.24:68,0,1	1/1:26,0:30:10.91:119,11,0	./.	1/1:27,0:27:8.85:85,9,0	1/1:39,0:33:16.11:105,16,0	1/1:9,0:9:0.47:1,0,0	0/1:29,10:43:77.14:155,0,77	0/1:20,12:34:36.77:192,0,37	1/1:21,17:39:19.61:275,20,0	1/1:35,0:35:17.24:136,17,0	1/1:33,0:35:14.79:166,15,0	1/1:23,0:22:13.90:109,14,0	1/1:15,0:15:5.76:36,6,0	0/1:16,0:11:8.05:38,0,8	1/1:25,0:26:10.34:106,10,0	0/1:76,0:75:67.89:71,0,68	0/1:15,15:29:23.66:64,0,24	0/1:22,2:24:64.27:72,0,64	0/1:52,4:51:58.44:282,0,58	1/1:17,1:17:2.73:23,3,0	1/1:31,0:26:8.37:48,8,0	1/1:17,0:17:8.57:47,9,0	0/1:14,0:12:15.50:15,0,24
chr10	15231138	.	CA	C	1066.65	PASS	AB=0.917;AC=8;AF=0.143;AN=56;BaseQRankSum=6.316;DP=504;FS=3.891;HRun=3;HaplotypeScore=70.7230;InbreedingCoeff=0.6645;MQ=79.36;MQ0=18;MQRankSum=-2.271;QD=16.67;ReadPosRankSum=2.502;VQSLOD=3.3914;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:51.02:0,51,573	0/0:2,0:2:2.88:0,3,15	0/0:90,1:39:42.05:0,42,661	0/0:94,0:33:42.83:0,43,383	1/1:2,13:15:39.05:416,39,0	1/1:2,11:13:30.01:324,30,0	1/1:2,14:16:39.12:464,39,0	0/0:18,0:18:47.94:0,48,420	0/0:6,0:6:8.99:0,9,79	0/0:13,0:13:21.26:0,21,152	0/0:6,0:6:8.97:0,9,81	0/0:10,0:11:23.94:0,24,252	0/0:12,0:12:30.01:0,30,334	0/0:15,0:17:42.11:0,42,528	0/0:15,0:15:42.12:0,42,546	0/0:24,0:24:62.13:0,62,777	0/0:19,0:19:26.88:0,27,243	0/0:19,0:19:54.07:0,54,655	0/0:8,0:8:14.61:0,15,123	0/1:10,0:10:4.14:4,0,38	0/0:7,0:7:9:0,9,79	0/0:4,0:4:6.48:0,6,69	0/0:8,0:8:18.04:0,18,236	0/0:17,0:17:48.11:0,48,624	0/1:8,2:10:2.40:2,0,237	0/0:8,0:8:17.95:0,18,160	0/0:17,0:17:30.60:0,31,207	0/0:4,0:4:8.88:0,9,73
chr10	15231140	.	AACC	A	1243.65	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=5.966;DP=494;FS=0.000;HRun=0;HaplotypeScore=79.9007;InbreedingCoeff=0.8461;MQ=79.78;MQ0=18;MQRankSum=-1.872;QD=27.64;ReadPosRankSum=2.643;VQSLOD=3.7569;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:51.09:0,51,941	0/0:1,0:1:2.84:0,3,14	0/0:89,0:37:64.59:0,65,1364	0/0:95,0:34:52.98:0,53,787	1/1:15,1:16:41.96:546,42,0	1/1:11,2:13:24.76:331,25,0	1/1:14,2:16:39.08:508,39,0	0/0:17,0:17:47.99:0,48,534	0/0:7,0:7:9:0,9,132	0/0:9,0:9:17.92:0,18,221	0/0:5,0:5:11.77:0,12,128	0/0:12,0:12:27.09:0,27,529	0/0:14,0:14:39.09:0,39,687	0/0:17,0:17:48.16:0,48,1003	0/0:15,0:15:45.13:0,45,960	0/0:23,0:23:66.13:0,66,1360	0/0:15,0:15:29.98:0,30,480	0/0:19,0:19:57.17:0,57,1239	0/0:7,0:7:15.04:0,15,227	0/0:8,0:10:11.95:0,12,147	0/0:7,0:7:9.01:0,9,139	0/0:5,0:5:11.96:0,12,151	0/0:8,0:8:18.06:0,18,413	0/0:18,0:18:51.15:0,51,1137	0/0:10,0:10:27.05:0,27,528	0/0:7,0:7:17.98:0,18,285	0/0:16,0:16:31.85:0,32,411	0/0:3,0:3:8.90:0,9,126
chr10	15231141	.	A	ACCC	1160.22	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-1.821;DP=492;FS=2.320;HRun=10;HaplotypeScore=96.4149;InbreedingCoeff=0.8389;MQ=79.73;MQ0=18;MQRankSum=-4.153;QD=10.45;ReadPosRankSum=-1.577;VQSLOD=0.3594;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:33.06:0,33,401	1/1:0,1:1:3.01:56,3,0	0/0:86,0:36:58.59:0,59,560	0/0:94,0:33:34.20:0,34,340	0/0:17,0:17:37.92:0,38,255	0/0:13,0:13:29.70:0,30,217	0/0:16,0:16:38.56:0,39,293	1/1:17,2:19:9.01:110,9,0	1/1:1,1:6:5.89:110,6,0	1/1:6,1:9:8.98:77,9,0	1/1:6,0:6:2.99:23,3,0	0/0:10,0:10:14.95:0,15,155	0/0:13,0:13:26.95:0,27,285	0/0:17,0:17:38.96:0,39,456	0/0:15,0:15:39.11:0,39,473	0/0:22,0:22:54.14:0,54,653	1/1:5,8:17:21.05:346,21,0	0/0:19,0:19:38.97:0,39,469	1/1:5,0:7:11.96:94,12,0	1/1:8,1:11:11.61:113,12,0	1/1:2,0:7:2.99:23,3,0	0/0:4,0:5:8.86:0,9,72	0/0:8,0:8:18.06:0,18,219	0/0:16,0:16:39.04:0,39,473	0/0:10,0:10:20.97:0,21,236	1/1:7,0:9:6:59,6,0	1/1:7,7:16:16.49:253,16,0	1/1:2,1:3:6.02:99,6,0
chr10	15231151	.	C	CCCA	969.83	PASS	AB=0.957;AC=17;AF=0.304;AN=56;BaseQRankSum=4.980;DP=480;FS=5.918;HRun=0;HaplotypeScore=89.2953;InbreedingCoeff=0.0366;MQ=82.47;MQ0=19;MQRankSum=-1.403;QD=6.55;ReadPosRankSum=1.699;VQSLOD=2.0718;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:51:0,51,623	0/1:3,0:3:17.02:32,0,17	0/0:76,0:30:65.49:0,65,570	0/0:87,0:31:36.98:0,37,310	0/1:16,0:17:19.91:68,0,20	0/1:12,0:12:10.45:24,0,10	1/1:18,0:18:5.59:85,6,0	0/1:6,2:8:55.47:131,0,55	0/1:7,0:7:14.80:88,0,15	1/1:6,1:7:8.99:106,9,0	0/0:4,0:4:1.90:0,2,22	0/0:9,0:9:16.78:0,17,186	0/0:15,0:15:35.94:0,36,425	0/0:16,0:16:47.32:0,47,632	0/0:20,0:20:60.06:0,60,697	0/0:19,0:19:54.15:0,54,731	0/1:22,0:22:99:122,0,142	0/0:18,0:18:47.96:0,48,571	0/1:5,1:7:55.64:76,0,56	0/1:11,0:11:8.02:116,0,8	0/1:9,0:9:2.29:2,0,61	0/0:6,0:6:11.93:0,12,117	0/0:12,0:12:22.58:0,23,328	0/0:19,0:19:50.73:0,51,606	0/0:11,0:11:24.05:0,24,304	0/1:9,0:9:39.90:40,0,83	0/1:15,0:15:83.34:168,0,83	1/1:3,0:3:6.02:75,6,0
chr10	15231889	.	GC	G	6789.58	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=14.421;DP=656;FS=11.473;HRun=1;HaplotypeScore=64.3704;InbreedingCoeff=0.9994;MQ=85.04;MQ0=0;MQRankSum=-1.405;QD=39.25;ReadPosRankSum=-0.441;VQSLOD=4.3521;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,160,2538	1/1:0,10:10:30.10:419,30,0	0/0:19,0:19:57.19:0,57,881	0/0:28,0:28:42.40:0,42,1099	0/0:14,0:14:42.14:0,42,663	0/0:26,0:26:78.27:0,78,1247	0/0:26,0:26:78.25:0,78,1217	1/1:0,22:22:63.21:879,63,0	1/1:0,15:15:42.14:585,42,0	1/1:2,18:20:57.16:751,57,0	1/1:0,12:12:36.12:502,36,0	0/0:32,0:32:96.33:0,96,1534	0/0:20,0:20:60.20:0,60,959	0/0:33,0:33:99:0,99,1521	0/0:24,0:24:72.23:0,72,1127	0/0:21,1:22:24.21:0,24,935	1/1:0,31:31:84.28:1171,84,0	0/0:24,0:24:72.16:0,72,1057	0/0:25,0:25:75.24:0,75,1157	0/0:12,0:12:33.10:0,33,503	0/0:48,0:48:99:0,142,2181	0/0:19,0:19:54.17:0,54,835	0/0:9,0:9:27.09:0,27,428	0/0:35,0:35:99:0,105,1599	0/0:14,0:14:42.14:0,42,668	1/1:0,22:22:66.20:888,66,0	1/1:0,27:27:75.25:1048,75,0	1/1:0,14:14:39.13:545,39,0
chr10	15233675	.	T	TAGGG	2320.34	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=6.772;DP=672;FS=0.631;HRun=0;HaplotypeScore=126.9970;InbreedingCoeff=0.9369;MQ=83.65;MQ0=0;MQRankSum=-6.566;QD=52.73;ReadPosRankSum=-0.258;VQSLOD=4.6958;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,147,2948	0/0:15,0:15:45.14:0,45,904	0/0:19,0:19:51.17:0,51,943	0/0:23,0:23:66.16:0,66,1221	0/0:29,0:29:87.30:0,87,1821	0/0:22,0:22:66.21:0,66,1304	0/0:16,0:16:45.15:0,45,893	0/0:36,0:36:99:0,102,2067	0/0:36,0:36:99:0,108,2266	0/0:32,0:32:96.32:0,96,1938	0/0:17,0:17:51.18:0,51,1059	0/0:27,0:27:81.28:0,81,1699	0/0:27,0:27:81.27:0,81,1663	0/0:31,0:31:93.32:0,93,1931	1/1:3,8:11:33.11:848,33,0	1/1:3,6:9:26.30:593,26,0	0/0:37,0:37:99:0,111,2288	1/1:1,1:2:3.01:81,3,0	1/1:4,2:6:14.69:276,15,0	1/1:2,7:9:24.08:593,24,0	1/1:6,1:7:6:104,6,0	0/0:43,0:43:99:0,126,2595	0/0:29,0:29:84.29:0,84,1742	0/0:25,0:25:72.20:0,72,1455	0/0:35,0:35:99:0,105,2145	0/0:35,0:35:99:0,102,2097	0/0:26,0:26:78.24:0,78,1554	0/0:19,0:19:57.20:0,57,1194
chr10	15233676	.	TTA	T	228.47	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=8.293;DP=678;FS=1.465;HRun=0;HaplotypeScore=106.7848;InbreedingCoeff=0.8858;MQ=83.49;MQ0=0;MQRankSum=-7.279;QD=5.31;ReadPosRankSum=1.343;VQSLOD=2.8543;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,150,2718	0/0:15,0:15:45.14:0,45,820	0/0:19,0:19:57.10:0,57,860	0/0:23,0:23:57.19:0,57,1047	0/0:29,0:29:87.30:0,87,1650	0/0:22,0:22:66.23:0,66,1228	0/0:17,0:17:48.13:0,48,844	0/0:37,0:37:99:0,108,1938	0/0:36,0:36:99:0,108,2049	0/0:32,0:32:96.33:0,96,1803	0/0:19,0:19:57.16:0,57,1014	0/0:27,0:27:81.28:0,81,1537	0/0:27,0:27:81.28:0,81,1514	0/0:33,0:33:99:0,99,1781	1/1:11,1:12:5.22:102,5,0	1/1:9,0:9:16.19:67,16,0	0/0:37,0:37:99:0,111,2090	1/1:1,0:1:2.22:7,2,0	1/1:7,0:7:13.58:108,14,0	1/1:9,0:9:18.37:95,18,0	1/1:2,3:5:2.22:7,2,0	0/0:43,0:43:99:0,129,2389	0/0:29,0:29:84.27:0,84,1562	0/0:25,0:25:75.24:0,75,1376	0/0:35,0:35:99:0,102,1924	0/0:35,0:35:99:0,105,1923	0/0:26,0:26:78.27:0,78,1455	0/0:19,0:19:57.20:0,57,1070
chr10	15233678	.	A	AGGGTTAGGGTTAGGGTT	17545.86	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=12.206;DP=741;FS=0.859;HRun=0;HaplotypeScore=336.0401;InbreedingCoeff=0.9950;MQ=82.00;MQ0=0;MQRankSum=-13.516;QD=182.77;ReadPosRankSum=0.696;VQSLOD=4.3423;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,144,6627	0/0:16,0:16:48.13:0,48,2015	0/0:23,0:23:57.14:0,57,1557	0/0:22,0:22:57.20:0,57,2345	0/0:32,0:32:87.30:0,87,4394	0/0:23,0:23:69.22:0,69,2879	0/0:17,0:17:48.15:0,48,1798	0/0:36,0:36:99:0,108,4371	0/0:36,0:36:99:0,108,5481	0/0:32,0:32:96.33:0,96,4632	0/0:22,0:22:63.15:0,63,2454	0/0:28,0:28:84.25:0,84,4077	0/0:28,0:28:84.26:0,84,3822	0/0:32,0:32:96.30:0,96,4463	1/1:18,7:25:75.24:4599,75,0	1/1:15,6:21:63.20:4265,63,0	0/0:37,0:37:99:0,111,5348	1/1:6,1:7:18.06:1486,18,0	1/1:10,2:12:31.65:1479,32,0	1/1:15,6:22:63.22:4701,63,0	1/1:8,1:9:15.01:1015,15,0	0/0:45,0:45:99:0,135,5995	0/0:28,0:28:84.29:0,84,4147	0/0:26,0:26:78.25:0,78,3371	0/0:34,0:34:99:0,102,5046	0/0:35,0:35:99:0,105,4860	0/0:26,0:26:78.27:0,78,3630	0/0:19,0:19:57.18:0,57,2609
chr10	15239970	.	GAA	G	5299.86	PASS	AB=0.952;AC=19;AF=0.339;AN=56;BaseQRankSum=10.340;DP=669;FS=12.917;HRun=11;HaplotypeScore=86.3469;InbreedingCoeff=0.9277;MQ=67.55;MQ0=4;MQRankSum=2.814;QD=21.37;ReadPosRankSum=2.680;VQSLOD=2.7813;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:44:99:0,114,1613	0/0:12,0:12:33.11:0,33,506	0/0:26,0:14:29.56:0,30,347	0/1:19,1:15:8.85:9,0,196	1/1:3,22:26:57.09:660,57,0	1/1:3,21:24:54.13:575,54,0	1/1:4,19:23:45.09:479,45,0	0/0:31,0:32:80.64:0,81,1100	0/0:16,0:16:36.12:0,36,554	0/0:28,0:30:76.02:0,76,1062	0/0:16,0:16:38.86:0,39,542	0/0:15,0:16:41.45:0,41,557	0/0:17,0:18:44.94:0,45,651	0/0:16,0:16:48.16:0,48,729	1/1:1,23:24:57.13:606,57,0	1/1:2,21:23:51.12:542,51,0	0/0:38,0:38:99:0,111,1685	1/1:3,27:30:54.09:562,54,0	1/1:3,28:32:86.92:890,87,0	1/1:4,27:30:72.10:753,72,0	1/1:2,12:15:17.47:224,17,0	0/0:23,0:23:51.16:0,51,764	0/0:12,0:13:37.64:0,38,501	0/0:29,0:28:78.21:0,78,1152	0/0:23,0:25:69.55:0,70,961	0/0:28,0:29:74.70:0,75,1028	0/0:25,0:26:74.71:0,75,1058	0/0:11,0:11:33.11:0,33,505
chr10	15240791	.	CT	C	10349.66	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=13.054;DP=782;FS=3.537;HRun=2;HaplotypeScore=76.7021;InbreedingCoeff=0.9961;MQ=65.75;MQ0=0;MQRankSum=-1.342;QD=35.44;ReadPosRankSum=0.633;VQSLOD=5.3177;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,147,2090	1/1:0,9:9:21.07:273,21,0	0/0:32,1:26:78.15:0,78,1018	0/0:19,1:18:54.16:0,54,759	1/1:3,17:20:48.16:623,48,0	1/1:1,29:30:78.25:1012,78,0	1/1:0,35:35:99:1324,102,0	1/1:2,36:38:99:1371,108,0	1/1:0,18:18:51.17:662,51,0	1/1:0,27:27:78.25:1012,78,0	1/1:2,7:9:15.05:195,15,0	0/0:35,0:35:99:0,102,1528	0/0:27,0:27:81.27:0,81,1209	0/0:35,0:35:99:0,105,1559	0/0:42,0:42:99:0,126,1841	0/0:35,0:35:99:0,105,1569	1/1:1,42:43:99:1558,120,0	0/0:27,0:27:78.26:0,78,1157	0/0:27,0:27:81.26:0,81,1194	0/0:21,0:21:57.14:0,57,776	0/0:57,0:57:99:0,169,2467	0/0:17,0:17:48.12:0,48,658	0/0:8,0:8:18.06:0,18,270	0/0:36,0:36:99:0,102,1468	0/0:18,0:18:54.17:0,54,786	1/1:0,23:23:60.17:762,60,0	1/1:0,26:26:78.25:1012,78,0	1/1:0,14:14:42.14:545,42,0
chr10	15242624	.	G	GA	6333.81	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=15.328;DP=678;FS=0.678;HRun=1;HaplotypeScore=88.3637;InbreedingCoeff=0.9990;MQ=88.59;MQ0=1;MQRankSum=-4.955;QD=35.78;ReadPosRankSum=1.427;VQSLOD=5.0006;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,132,1842	1/1:0,8:8:21.07:281,21,0	0/0:21,0:21:36.74:0,37,712	0/0:33,0:33:74.13:0,74,960	0/0:20,0:20:54.17:0,54,739	0/0:28,0:28:81.27:0,81,1130	0/0:43,0:43:99:0,126,1759	1/1:2,16:18:42.09:550,42,0	1/1:0,20:20:60.20:808,60,0	1/1:1,21:22:63.68:872,64,0	1/1:1,11:12:26.11:365,26,0	0/0:21,0:21:63.21:0,63,878	0/0:32,0:32:90.29:0,90,1237	0/0:32,0:32:93.29:0,93,1277	0/0:26,0:26:75.25:0,75,1046	0/0:19,0:19:57.18:0,57,775	1/1:2,31:33:54.41:1193,54,0	0/0:23,0:23:60.18:0,60,817	0/0:18,0:18:51.17:0,51,712	0/0:21,0:21:60.20:0,60,836	0/0:39,0:38:99:0,114,1589	0/0:16,0:16:45.14:0,45,612	0/0:21,0:21:60.19:0,60,808	0/0:33,0:33:99:0,99,1365	0/0:10,0:10:30.10:0,30,420	1/1:3,27:30:79.49:1072,79,0	1/1:2,22:24:60.19:794,60,0	1/1:0,10:10:30.10:400,30,0
chr10	15242958	.	T	TTA	2220.63	PASS	AB=0.992;AC=32;AF=0.571;AN=56;BaseQRankSum=5.308;DP=483;FS=34.565;HRun=0;HaplotypeScore=81.6842;InbreedingCoeff=0.4660;MQ=58.31;MQ0=17;MQRankSum=-4.982;QD=6.07;ReadPosRankSum=-3.622;VQSLOD=0.3553;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:91.70:0,92,755	1/1:8,0:7:8.98:46,9,0	0/1:34,0:9:5.01:5,0,47	0/1:27,0:6:3.38:3,0,32	1/1:18,0:18:10.04:177,10,0	1/1:11,0:11:12.08:97,12,0	0/1:17,0:17:9.15:57,0,9	0/1:25,0:25:11.01:206,0,11	0/1:18,0:18:9.12:57,0,9	1/1:17,0:16:34.94:211,35,0	0/1:11,0:11:3.13:41,0,3	0/0:18,0:18:40.68:0,41,319	0/0:20,0:18:47.73:0,48,380	0/0:7,0:7:17.84:0,18,142	1/1:13,1:15:17.36:140,17,0	1/1:12,3:16:30.91:247,31,0	0/1:28,0:27:17.38:84,0,17	1/1:11,2:16:25.79:202,26,0	1/1:19,0:18:30.84:238,31,0	0/1:14,1:15:10.29:139,0,10	1/1:4,0:5:8.93:71,9,0	0/0:6,0:6:17.98:0,18,157	0/0:10,0:10:26.94:0,27,219	0/0:14,0:14:36.37:0,36,311	0/0:7,0:8:23.76:0,24,208	1/1:22,0:21:37.90:240,38,0	1/1:21,0:20:14.66:110,15,0	1/1:14,0:14:7.19:48,7,0
chr10	15242963	.	CT	C	2394.87	PASS	AB=0.756;AC=33;AF=0.589;AN=56;BaseQRankSum=5.721;DP=492;FS=4.951;HRun=8;HaplotypeScore=73.8791;InbreedingCoeff=0.6416;MQ=58.84;MQ0=18;MQRankSum=-4.129;QD=7.00;ReadPosRankSum=0.117;VQSLOD=0.9331;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:71.01:0,71,747	1/1:2,6:7:8.89:76,9,0	0/1:35,0:9:1.02:1,0,151	0/0:28,0:6:4.73:0,5,41	1/1:7,14:21:27.02:255,27,0	1/1:4,8:11:11.70:96,12,0	0/1:6,10:16:0.08:0,0,0	1/1:10,19:29:43.91:405,44,0	1/1:3,17:20:19.27:176,19,0	1/1:9,9:17:17.97:173,18,0	1/1:4,6:10:11.76:87,12,0	0/0:19,0:19:36.06:0,36,408	0/0:20,0:18:30.08:0,30,350	0/0:7,0:7:10.58:0,11,113	0/1:8,7:14:7.93:95,0,8	0/1:12,5:16:20.65:42,0,21	1/1:13,15:27:26.38:204,26,0	0/1:10,7:17:7.27:48,0,7	1/1:7,9:14:24.03:230,24,0	1/1:5,12:17:14.86:235,15,0	1/1:4,3:6:3:28,3,0	0/0:6,0:6:12.51:0,13,146	0/0:12,0:12:24.06:0,24,280	0/0:15,0:14:30.51:0,31,335	0/0:9,0:9:18:0,18,180	1/1:11,11:21:29.96:287,30,0	1/1:5,15:19:11.84:107,12,0	1/1:5,9:14:6.26:49,6,0
chr10	15244635	.	C	CG	119.98	PASS	AB=1.000;AC=7;AF=0.152;AN=46;BaseQRankSum=-0.135;DP=128;FS=0.000;HRun=1;HaplotypeScore=27.4955;InbreedingCoeff=0.4070;MQ=77.81;MQ0=0;MQRankSum=-0.290;QD=4.44;ReadPosRankSum=1.566;VQSLOD=0.2952;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:23.02:0,23,184	./.	0/0:1,0:1:0.89:0,1,2	0/0:6,0:6:4.98:0,5,43	1/1:2,0:2:6.01:66,6,0	1/1:1,5:6:0.46:1,0,0	1/1:4,11:15:4.87:147,5,0	0/0:5,0:5:9.44:0,9,70	0/0:3,0:3:3:0,3,25	0/1:4,0:4:4.65:5,0,37	0/0:1,0:1:2.97:0,3,20	./.	0/0:2,0:2:5.96:0,6,45	0/0:3,0:3:6:0,6,53	0/0:9,0:9:26.96:0,27,223	0/0:7,0:7:20.47:0,20,158	0/0:9,0:9:14.88:0,15,136	0/0:3,0:3:9:0,9,77	0/0:3,0:3:9:0,9,77	./.	0/0:14,0:14:14.96:0,15,123	./.	0/0:1,0:1:0.47:0,0,1	0/0:8,0:8:15.35:0,15,152	./.	0/0:2,0:2:2.96:0,3,19	0/0:8,0:8:17.89:0,18,139	0/0:2,0:2:5.97:0,6,45
chr10	15244636	.	GCC	G	684.61	PASS	AB=0.926;AC=19;AF=0.396;AN=48;BaseQRankSum=-2.391;DP=129;FS=7.184;HRun=12;HaplotypeScore=22.6379;InbreedingCoeff=0.4117;MQ=77.21;MQ0=0;MQRankSum=-2.211;QD=11.80;ReadPosRankSum=0.887;VQSLOD=0.2363;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:8,0:9:0:0,0,0	0/0:1,0:1:0.47:0,0,1	0/0:3,0:1:2.80:0,3,13	0/0:6,0:6:6.01:0,6,60	0/0:2,0:2:0.89:0,1,2	0/0:6,0:6:3.01:0,3,36	0/0:14,0:15:14.69:0,15,156	1/1:0,4:5:11.62:82,12,0	1/1:0,3:3:3.01:31,3,0	1/1:0,4:4:9.02:90,9,0	1/1:1,0:1:2.94:18,3,0	0/0:2,0:2:0:0,0,0	0/0:2,0:2:3.01:0,3,39	0/0:3,0:4:0.37:0,0,1	1/1:3,6:9:18.02:183,18,0	1/1:2,5:7:18.04:182,18,0	1/1:5,4:9:1.92:143,2,0	1/1:1,2:3:6:61,6,0	0/0:3,0:3:0:0,0,0	./.	0/0:13,0:14:3.01:0,3,42	./.	0/1:1,0:1:0:0,0,0	0/0:6,0:8:3:0,3,29	./.	./.	0/1:5,2:7:21.54:22,0,36	0/0:2,0:2:0:0,0,0
chr10	15246633	.	GGGAT	G	16705.29	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=17.564;DP=685;FS=0.301;HRun=0;HaplotypeScore=131.3450;InbreedingCoeff=0.9966;MQ=81.70;MQ0=3;MQRankSum=-6.580;QD=41.56;ReadPosRankSum=3.918;VQSLOD=4.7777;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,105,2684	1/1:0,11:11:21.07:382,21,0	0/0:26,0:26:69.24:0,69,1666	0/0:20,0:20:57.15:0,57,1286	1/1:4,13:17:30.10:544,30,0	1/1:1,20:21:51.17:927,51,0	1/1:4,21:25:48.12:835,48,0	1/1:2,21:23:63.20:1107,63,0	1/1:2,21:23:51.17:908,51,0	1/1:2,22:24:66.18:1130,66,0	1/1:2,16:18:48.16:872,48,0	0/0:32,0:32:87.28:0,87,2159	0/0:36,0:36:96.33:0,96,2490	0/0:20,0:20:57.17:0,57,1415	1/1:3,32:35:84.29:1525,84,0	1/1:3,22:25:63.22:1145,63,0	1/1:3,34:35:90.31:1628,90,0	1/1:2,9:11:24.08:436,24,0	1/1:3,12:15:36.05:553,36,0	1/1:3,20:23:57.14:1000,57,0	1/1:5,25:30:57.20:1035,57,0	0/0:24,0:24:63.22:0,63,1645	0/0:23,0:23:60.21:0,60,1534	0/0:35,0:35:99:0,102,2516	0/0:27,0:27:78.26:0,78,1893	1/1:2,24:26:72.22:1267,72,0	1/1:2,28:29:63.05:1139,63,0	1/1:1,7:8:15.05:272,15,0
chr10	15247873	.	ACCT	A	7593.01	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=17.894;DP=849;FS=5.340;HRun=0;HaplotypeScore=142.9597;InbreedingCoeff=0.9819;MQ=80.26;MQ0=0;MQRankSum=-3.969;QD=33.45;ReadPosRankSum=1.260;VQSLOD=5.4823;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,129,2673	1/1:4,11:15:27.07:382,27,0	0/0:31,0:31:55.45:0,55,1204	0/0:31,0:31:52.19:0,52,1197	0/0:25,0:25:66.23:0,66,1368	0/0:25,0:24:60.21:0,60,1257	0/0:30,0:30:69.24:0,69,1444	1/1:11,23:34:69.22:1011,69,0	1/1:3,24:27:66.22:986,66,0	1/1:8,28:36:84.27:1234,84,0	1/1:4,18:22:45.15:672,45,0	0/0:29,0:29:63.22:0,63,1320	0/0:22,0:22:51.16:0,51,1028	0/0:28,0:28:72.25:0,72,1487	0/0:37,0:37:99:0,99,2074	0/0:52,0:52:99:0,141,2954	1/1:4,15:19:45.15:672,45,0	0/0:28,0:28:66.23:0,66,1383	0/0:32,0:32:72.22:0,72,1378	0/0:37,0:37:90.31:0,90,1871	0/0:51,0:53:99:0,135,2737	0/0:23,0:23:63.19:0,63,1240	0/0:20,1:21:6.32:0,6,936	0/0:43,0:42:99:0,102,2098	0/0:22,0:22:60.21:0,60,1257	1/1:5,21:26:63.20:911,63,0	1/1:7,34:41:99:1499,102,0	1/1:1,6:7:15.05:224,15,0
chr10	15248632	.	CAT	C	1479.23	PASS	AB=0.839;AC=21;AF=0.389;AN=54;BaseQRankSum=9.178;DP=312;FS=6.640;HRun=0;HaplotypeScore=45.3327;InbreedingCoeff=0.4886;MQ=81.96;MQ0=1;MQRankSum=0.341;QD=9.30;ReadPosRankSum=2.969;VQSLOD=2.2197;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:14,1:15:6.56:7,0,399	0/0:5,0:5:12.04:0,12,195	0/0:10,0:7:2.20:0,2,69	0/0:16,0:10:9.75:0,10,65	1/1:6,6:12:21.06:253,21,0	1/1:3,14:17:33.10:403,33,0	1/1:2,1:3:3.01:37,3,0	0/0:35,2:37:7.99:0,8,1062	0/0:8,0:8:14.80:0,15,243	0/1:9,1:10:18.61:19,0,224	0/0:7,0:7:18.06:0,18,292	0/1:6,1:7:24.61:25,0,134	0/0:5,0:5:12.04:0,12,195	0/0:8,0:8:15.05:0,15,243	1/1:2,0:8:12.92:60,13,0	0/1:1,0:8:19.30:19,0,40	0/1:29,2:31:7.08:7,0,882	1/1:3,0:19:33.07:158,33,0	1/1:4,9:13:27.08:330,27,0	1/1:1,5:6:15.01:167,15,0	1/1:3,6:9:15.05:183,15,0	0/0:5,0:5:3.01:0,3,49	./.	0/0:2,0:2:3.01:0,3,49	0/0:16,0:16:39.13:0,39,627	0/0:7,0:7:12.02:0,12,168	0/0:10,0:10:15.05:0,15,243	0/0:15,0:15:45.15:0,45,722
chr10	15251304	.	C	CCTGT	3739.82	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-9.652;DP=723;FS=1.216;HRun=0;HaplotypeScore=118.9838;InbreedingCoeff=0.9960;MQ=88.56;MQ0=0;MQRankSum=-3.986;QD=50.54;ReadPosRankSum=-0.032;VQSLOD=4.1959;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,132,2509	0/0:14,0:14:42.14:0,42,877	0/0:31,0:31:87.17:0,87,1514	0/0:22,0:22:56.81:0,57,1019	1/1:0,17:20:16.88:449,17,0	1/1:0,18:20:45.15:1297,45,0	1/1:0,30:34:69.24:1994,69,0	0/0:24,0:24:72.18:0,72,1374	0/0:24,0:24:72.17:0,72,1384	0/0:21,0:21:63.15:0,63,1219	0/0:14,0:14:39.10:0,39,723	0/0:22,0:22:66.10:0,66,1251	0/0:26,0:26:78.27:0,78,1614	0/0:25,0:25:75.21:0,75,1487	0/0:25,0:25:72.22:0,72,1417	0/0:21,0:21:63.06:0,63,1113	0/0:40,0:40:99:0,120,2297	0/0:32,0:32:93.16:0,93,1742	0/0:17,0:17:51.13:0,51,984	0/0:23,0:23:63.02:0,63,1145	0/0:47,0:47:99:0,138,2741	0/0:25,0:25:75.20:0,75,1465	0/0:20,0:20:60.14:0,60,1124	0/0:37,0:37:99:0,108,2213	0/0:23,0:23:69.09:0,69,1167	0/0:35,0:35:99:0,102,1896	0/0:26,0:26:72.25:0,72,1501	0/0:10,0:10:30.03:0,30,543
chr10	15252603	.	C	CA	1157.40	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=-3.148;DP=506;FS=5.967;HRun=6;HaplotypeScore=87.5470;InbreedingCoeff=0.6814;MQ=67.73;MQ0=6;MQRankSum=0.744;QD=5.54;ReadPosRankSum=-0.263;VQSLOD=-0.1645;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:17:0,17,96	0/0:9,0:9:20.62:0,21,176	0/0:12,0:6:5.36:0,5,70	0/0:12,0:8:7.51:0,8,79	1/1:8,7:15:29.94:332,30,0	1/1:2,12:15:18.06:220,18,0	1/1:1,10:11:25.88:286,26,0	0/0:28,0:27:38.35:0,38,300	0/0:11,0:11:29.54:0,30,276	0/0:17,0:17:25.51:0,26,159	0/0:8,0:8:13.81:0,14,100	0/0:17,0:17:10.92:0,11,80	0/1:16,0:16:5.62:6,0,66	0/0:12,0:12:7.04:0,7,97	1/1:23,0:23:6.34:56,6,0	1/1:21,0:21:5.48:56,5,0	0/0:36,0:35:74.05:0,74,663	0/0:28,0:28:4.77:0,5,14	0/1:22,0:21:0.12:120,0,0	1/1:22,0:21:15.83:114,16,0	1/1:31,0:31:16.62:133,17,0	0/0:16,0:16:2.52:0,3,42	1/1:14,0:14:6.53:18,7,0	0/1:19,0:19:5.21:5,0,68	0/0:14,0:14:11.20:0,11,54	0/0:24,0:25:39.57:0,40,300	0/0:19,0:19:37.49:0,37,304	0/0:13,0:13:24.01:0,24,228
chr10	15252817	.	A	ATTCACAGTTC	6991.57	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-3.671;DP=631;FS=0.000;HRun=0;HaplotypeScore=171.6792;InbreedingCoeff=0.9987;MQ=88.01;MQ0=0;MQRankSum=-11.479;QD=90.80;ReadPosRankSum=-1.932;VQSLOD=4.2084;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:87.30:0,87,2923	0/0:8,0:8:24.08:0,24,814	0/0:27,0:27:74.97:0,75,2200	0/0:21,0:21:57.18:0,57,1694	0/0:22,0:22:63.20:0,63,1991	0/0:15,0:15:42.14:0,42,1289	0/0:35,0:35:99:0,99,2982	0/0:35,0:35:99:0,102,3263	0/0:16,0:16:48.16:0,48,1510	0/0:15,0:15:39.13:0,39,1280	0/0:16,0:16:42.13:0,42,1293	0/0:29,0:29:84.29:0,84,2671	0/0:23,0:23:60.16:0,60,2020	0/0:19,0:19:57.17:0,57,1709	0/0:37,0:37:99:0,111,3672	0/0:21,0:21:63.22:0,63,1895	0/0:30,0:30:90.31:0,90,2926	0/0:23,0:23:69.24:0,69,2153	1/1:12,5:18:45.14:1707,45,0	1/1:1,19:22:51.18:2597,51,0	1/1:6,24:37:63.21:2688,63,0	0/0:13,0:13:36.12:0,36,1201	0/0:13,0:13:33.11:0,33,1093	0/0:41,0:41:99:0,123,3838	0/0:13,0:13:39.13:0,39,1298	0/0:26,0:26:75.24:0,75,2394	0/0:14,0:14:42.14:0,42,1370	0/0:11,0:11:27.09:0,27,847
chr10	15253272	.	TCCCTCC	T	1884.61	PASS	AB=0.986;AC=22;AF=0.458;AN=48;BaseQRankSum=-0.501;DP=238;FS=14.923;HRun=0;HaplotypeScore=55.9486;InbreedingCoeff=-0.0276;MQ=43.68;MQ0=18;MQRankSum=1.828;QD=11.42;ReadPosRankSum=-0.100;VQSLOD=0.5261;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:12:32.89:0,33,454	0/1:5,0:4:8.93:65,0,9	./.	0/1:9,0:2:0:0,0,0	0/0:6,0:6:0.60:0,1,35	0/1:12,0:11:32.13:38,0,32	0/1:10,0:9:7.25:38,0,7	1/1:15,0:14:18.41:293,18,0	0/1:9,0:9:58.05:80,0,58	0/1:7,0:7:6.01:141,0,6	./.	0/0:3,0:3:2.87:0,3,26	0/0:6,0:5:8.58:0,9,144	0/0:9,0:7:18.06:0,18,374	0/1:7,0:7:38.28:60,0,38	0/1:8,0:8:80.65:81,0,100	0/1:10,0:11:54.77:170,0,55	1/1:6,0:5:3.01:44,3,0	1/1:11,0:10:18.63:275,19,0	0/1:13,0:12:33.14:44,0,33	1/1:11,0:11:14.09:172,14,0	./.	0/0:6,0:6:7.95:0,8,197	0/0:13,0:12:11.93:0,12,329	./.	0/1:8,0:7:14.05:136,0,14	0/1:11,0:11:12.68:160,0,13	1/1:11,0:9:21.01:242,21,0
chr10	15253340	.	T	TA	1161.23	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-4.936;DP=392;FS=9.021;HRun=1;HaplotypeScore=52.5983;InbreedingCoeff=0.9821;MQ=61.02;MQ0=7;MQRankSum=2.459;QD=32.26;ReadPosRankSum=1.060;VQSLOD=2.3598;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:72.23:0,72,935	0/0:6,0:6:18.03:0,18,217	0/0:21,0:16:33.92:0,34,432	0/0:25,0:15:35.60:0,36,427	1/1:1,7:7:18.06:270,18,0	1/1:0,12:12:30.10:449,30,0	1/1:0,16:16:39.13:584,39,0	0/0:17,0:17:39.13:0,39,507	0/0:16,0:16:45.15:0,45,579	0/0:19,0:19:57.19:0,57,740	0/0:8,0:8:24.08:0,24,311	0/0:10,0:10:30.10:0,30,389	0/0:13,0:13:39.13:0,39,503	0/0:12,0:12:36.12:0,36,467	0/0:13,0:13:36.12:0,36,467	0/0:17,0:17:51.17:0,51,662	0/0:17,0:17:48.14:0,48,608	0/0:10,0:10:27.09:0,27,350	0/0:15,0:15:45.10:0,45,565	0/0:7,0:7:18.06:0,18,233	0/0:15,0:14:39.11:0,39,491	0/0:10,0:10:27.09:0,27,351	0/0:8,0:8:21.07:0,21,273	0/0:20,0:20:57.18:0,57,738	0/0:11,0:11:30.10:0,30,389	0/0:19,0:18:48.16:0,48,623	0/0:16,0:16:48.16:0,48,622	0/0:5,0:5:15.05:0,15,195
chr10	15253582	.	TTGCTCACCTGGCCTGCACCAGAGCTC	T	561.50	PASS	AB=1.000;AC=7;AF=0.146;AN=48;BaseQRankSum=-1.220;DP=600;FS=16.099;HRun=0;HaplotypeScore=290.0746;InbreedingCoeff=-0.0200;MQ=53.49;MQ0=51;MQRankSum=-1.343;QD=3.09;ReadPosRankSum=0.040;VQSLOD=1.0146;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:48.13:0,48,940	./.	./.	./.	0/0:5,5:9:6.01:0,6,107	0/1:17,0:13:99:110,0,135	0/1:36,0:20:53.91:142,0,54	1/1:19,0:7:1.25:3,1,0	0/0:27,0:27:60.07:0,60,1325	0/0:20,0:17:3.01:0,3,89	0/0:10,0:10:18.06:0,18,422	0/0:28,0:27:72.20:0,72,1740	0/0:24,0:23:63.17:0,63,1519	0/0:41,0:39:96.29:0,96,2481	0/0:25,0:22:39.11:0,39,933	0/0:15,0:15:33.08:0,33,674	0/0:30,0:30:75.24:0,75,1848	0/0:22,0:20:31.29:0,31,988	0/1:16,0:6:56.83:57,0,116	0/1:12,0:11:66.63:67,0,133	0/1:82,0:55:99:298,0,545	./.	0/0:11,0:9:8.97:0,9,144	0/0:37,0:36:78.22:0,78,1770	0/0:13,0:12:21.07:0,21,520	0/0:22,0:20:27.01:0,27,525	0/0:16,0:15:36.11:0,36,1009	0/0:6,0:6:12.04:0,12,272
chr10	15253712	.	TTGCTCACCTGGCCTGCACCAGAGCTC	T	1438.83	PASS	AC=18;AF=0.333;AN=54;BaseQRankSum=6.531;DP=731;FS=1.625;HRun=0;HaplotypeScore=405.1043;InbreedingCoeff=0.8930;MQ=52.95;MQ0=40;MQRankSum=0.525;QD=10.20;ReadPosRankSum=0.086;VQSLOD=1.0773;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:19:23.66:0,24,219	1/1:10,0:8:8.99:74,9,0	./.	0/0:10,0:1:2.04:0,2,6	0/0:16,0:15:35.73:0,36,281	0/0:23,0:16:29.92:0,30,329	0/0:66,0:64:99:0,134,1073	1/1:20,0:13:19.24:157,19,0	1/1:29,0:27:6.96:375,7,0	1/1:15,0:10:24.02:225,24,0	1/1:7,6:11:5.78:32,6,0	0/0:33,0:32:63.58:0,64,652	0/0:18,0:18:41.99:0,42,576	0/0:37,0:36:83.93:0,84,980	0/0:37,0:36:77.91:0,78,881	0/0:28,0:28:50.92:0,51,493	1/1:27,0:25:44.94:395,45,0	0/0:39,0:38:86:0,86,792	0/0:22,0:13:14.75:0,15,171	0/0:16,0:15:27:0,27,367	0/0:143,0:123:99:0,216,2263	0/0:12,0:11:18.02:0,18,273	0/0:12,0:10:17.99:0,18,196	0/0:42,0:42:99:0,102,1225	0/0:11,0:11:17.94:0,18,233	1/1:16,0:14:21.01:218,21,0	1/1:7,0:7:17.84:135,18,0	1/1:4,0:3:2.99:24,3,0
chr10	15253790	.	CTGCTCACCTGGCCTGCACCTGAGCAT	C	7355.21	PASS	AB=1.000;AC=16;AF=0.286;AN=56;BaseQRankSum=12.650;DP=630;FS=3.819;HRun=0;HaplotypeScore=369.5429;InbreedingCoeff=0.7556;MQ=57.51;MQ0=20;MQRankSum=2.197;QD=31.70;ReadPosRankSum=-1.928;VQSLOD=2.2622;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:90.26:0,90,1858	0/0:7,0:6:15.05:0,15,262	0/0:7,0:1:2.97:0,3,20	0/0:13,0:5:3.04:0,3,147	1/1:4,18:19:27.01:325,27,0	1/1:22,0:19:42.14:821,42,0	0/1:29,0:29:55.03:698,0,55	0/0:28,0:22:48.14:0,48,788	0/0:28,0:27:63.38:0,63,1162	0/0:18,0:17:48.16:0,48,1055	0/0:7,0:5:9.03:0,9,175	0/0:25,0:25:75.26:0,75,1733	0/0:30,0:30:78.27:0,78,1975	0/0:33,0:33:81.27:0,81,2317	1/1:15,0:15:30.10:514,30,0	1/1:22,0:22:60.20:1224,60,0	0/0:23,0:20:60.17:0,60,1084	1/1:14,0:13:33.11:611,33,0	0/1:12,0:4:50.96:51,0,52	1/1:9,0:8:12.04:201,12,0	1/1:87,0:82:90.07:2910,90,0	0/0:21,0:20:45.13:0,45,1083	0/0:17,0:16:32.87:0,33,890	0/0:35,0:35:90.29:0,90,2776	0/0:22,0:21:57.20:0,57,1525	0/0:21,0:21:61.76:0,62,1174	0/0:15,0:15:45.14:0,45,852	0/0:12,0:11:30.10:0,30,542
chr10	15255025	.	TTTTTTTTAAAA	T	1651.30	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=0.844;DP=427;FS=0.000;HRun=0;HaplotypeScore=154.0318;InbreedingCoeff=0.3249;MQ=69.73;MQ0=9;MQRankSum=-5.559;QD=20.90;ReadPosRankSum=0.413;VQSLOD=2.3652;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:51.16:0,51,2379	0/0:3,0:3:9.03:0,9,418	0/0:67,0:27:56.90:0,57,1079	0/0:48,0:20:38.08:0,38,686	0/1:12,0:11:12.99:206,0,13	0/0:15,0:14:11.28:0,11,239	0/1:4,0:4:15.94:16,0,40	0/0:38,0:37:94.25:0,94,3147	0/0:4,0:4:9.03:0,9,342	0/0:17,0:17:48.16:0,48,1808	0/0:11,0:11:27.09:0,27,1019	0/0:2,0:2:3.01:0,3,73	0/0:10,0:10:30.09:0,30,1163	0/0:2,0:2:3.01:0,3,164	0/1:7,0:6:6.61:114,0,7	0/1:10,0:10:39.07:39,0,97	0/0:28,0:28:72.22:0,72,3022	0/1:16,0:16:66.03:66,0,101	1/1:13,4:17:26.54:817,27,0	1/1:9,2:10:18.06:528,18,0	1/1:2,0:2:2.97:20,3,0	0/0:3,0:3:6.02:0,6,209	0/0:4,0:4:9.03:0,9,359	0/0:5,0:5:12.04:0,12,562	0/0:17,0:17:45.15:0,45,2210	0/0:17,0:17:42.13:0,42,1458	0/0:17,0:15:39.11:0,39,1202	0/0:22,0:22:54.18:0,54,2031
chr10	15255029	.	TTTTAAAA	T	1528.55	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=7.935;DP=410;FS=5.425;HRun=0;HaplotypeScore=122.6791;InbreedingCoeff=0.8400;MQ=66.62;MQ0=11;MQRankSum=-8.384;QD=18.42;ReadPosRankSum=1.282;VQSLOD=2.9632;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:51.18:0,51,1748	0/0:3,0:3:9.03:0,9,258	0/0:69,0:24:57.07:0,57,1154	0/0:50,0:21:39.52:0,40,689	1/1:12,0:11:24.37:182,24,0	1/1:15,0:14:27.04:169,27,0	1/1:4,0:4:0.49:35,0,0	0/0:38,0:38:99:0,104,2261	0/0:3,0:3:9.03:0,9,229	0/0:17,0:17:48.14:0,48,1176	0/0:10,0:10:27.09:0,27,661	0/0:1,0:1:3.01:0,3,89	0/0:10,0:10:30.10:0,30,929	0/0:2,0:2:6.02:0,6,188	1/1:6,0:5:13.22:96,13,0	1/1:8,0:8:19.54:105,20,0	0/0:28,0:28:72.23:0,72,1920	1/1:12,0:12:23.51:164,24,0	1/1:10,4:14:29.57:569,30,0	1/1:8,2:9:18.06:385,18,0	1/1:2,0:2:2.97:20,3,0	0/0:2,0:2:6.02:0,6,186	0/0:4,0:4:12.04:0,12,342	0/0:5,0:5:12.04:0,12,410	0/0:17,0:17:45.13:0,45,1604	0/0:15,0:15:42.13:0,42,983	0/0:16,0:14:39.10:0,39,873	0/0:20,0:20:54.16:0,54,1317
chr10	15255034	.	AAAT	A	1767	PASS	AC=16;AF=0.296;AN=54;BaseQRankSum=8.387;DP=396;FS=1.797;HRun=0;HaplotypeScore=98.3601;InbreedingCoeff=0.8917;MQ=68.89;MQ0=11;MQRankSum=-7.431;QD=24.54;ReadPosRankSum=1.223;VQSLOD=3.8659;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:48.16:0,48,1112	0/0:3,0:3:9.03:0,9,150	0/0:69,0:22:39.77:0,40,633	0/0:54,1:24:36.55:0,37,524	1/1:10,0:9:25.06:220,25,0	1/1:13,2:14:42.12:514,42,0	1/1:3,0:3:9.02:97,9,0	0/0:36,0:35:88.93:0,89,1245	0/0:3,0:3:8.86:0,9,111	0/0:17,0:17:50.95:0,51,707	0/0:11,0:11:29.89:0,30,387	0/0:1,0:1:3.01:0,3,49	0/0:9,0:9:27.09:0,27,638	0/0:2,0:2:6.02:0,6,147	1/1:6,0:5:14.03:119,14,0	1/1:8,0:8:23.27:235,23,0	0/0:27,0:27:68.33:0,68,1102	1/1:11,0:11:30.09:361,30,0	1/1:12,0:12:28.68:236,29,0	1/1:6,1:6:17.62:182,18,0	./.	0/0:2,0:2:6.02:0,6,124	0/0:4,0:4:12.04:0,12,247	0/0:5,0:5:12.04:0,12,271	0/0:16,0:16:48.16:0,48,1155	0/0:14,0:14:36.98:0,37,542	0/0:16,0:14:30.32:0,30,420	0/0:18,0:18:54.18:0,54,775
chr10	15255035	.	AAT	A	2247.20	PASS	AB=1.000;AC=20;AF=0.370;AN=54;BaseQRankSum=5.050;DP=393;FS=0.000;HRun=0;HaplotypeScore=88.5300;InbreedingCoeff=0.5657;MQ=69.04;MQ0=12;MQRankSum=-6.867;QD=16.28;ReadPosRankSum=-1.384;VQSLOD=2.7522;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:48.14:0,48,877	0/0:3,0:3:8.98:0,9,78	0/0:68,0:21:1.19:0,1,326	0/0:56,0:24:13.50:0,14,292	1/1:3,7:9:26.99:349,27,0	1/1:2,13:14:42.14:648,42,0	1/1:0,3:3:9.03:144,9,0	0/1:35,0:34:4.08:4,0,456	0/1:3,0:3:17.50:18,0,34	0/0:17,0:17:19.27:0,19,281	0/0:11,0:11:2.31:0,2,161	0/0:1,0:1:3:0,3,25	0/0:9,0:9:27.08:0,27,477	0/0:2,0:2:6.02:0,6,119	1/1:1,5:5:15.01:199,15,0	1/1:1,7:8:24.05:355,24,0	0/0:27,0:27:48.12:0,48,561	1/1:0,11:11:30.10:468,30,0	1/1:11,0:11:23.37:106,23,0	1/1:7,0:6:12.42:74,12,0	./.	0/0:2,0:2:6.01:0,6,85	0/0:4,0:4:12.01:0,12,168	0/0:5,0:5:12.03:0,12,208	0/0:16,0:16:48.15:0,48,921	0/1:14,0:14:7.87:8,0,216	0/1:15,0:13:64.60:65,0,142	0/0:18,0:18:53.04:0,53,362
chr10	15255055	.	TTA	T	628.77	PASS	AB=0.906;AC=13;AF=0.241;AN=54;BaseQRankSum=7.280;DP=368;FS=5.572;HRun=0;HaplotypeScore=77.1065;InbreedingCoeff=0.2910;MQ=48.58;MQ0=22;MQRankSum=-6.883;QD=5.20;ReadPosRankSum=0.960;VQSLOD=1.9630;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:15:38.26:0,38,527	0/0:3,0:3:8.60:0,9,53	0/0:26,0:1:1.82:0,2,5	0/1:33,0:11:10.04:10,0,92	1/1:8,0:4:5.48:33,5,0	1/1:18,0:15:0.73:144,1,0	0/1:7,0:5:18.14:18,0,22	0/0:39,0:32:76.61:0,77,492	0/0:5,0:4:8.39:0,8,47	0/0:19,0:13:33.91:0,34,191	0/0:15,0:11:10.71:0,11,72	0/0:3,0:3:3.01:0,3,50	0/0:11,0:8:23.55:0,24,312	0/0:5,0:4:8.96:0,9,117	1/1:6,0:4:11.50:62,12,0	1/1:9,0:8:22.97:122,23,0	0/0:26,1:27:11.98:0,12,316	0/1:14,0:11:16.33:57,0,16	0/1:8,7:15:24.75:271,0,25	0/1:9,2:10:61:67,0,61	0/0:3,0:3:3:0,3,26	./.	0/0:4,0:3:6.02:0,6,100	0/0:6,0:6:9.01:0,9,124	0/0:22,0:22:48.08:0,48,633	0/0:17,0:13:17.97:0,18,120	0/0:11,0:11:19.76:0,20,95	0/0:12,0:10:22.70:0,23,117
chr10	15255057	.	AT	A	2012.61	PASS	AB=0.917;AC=33;AF=0.611;AN=54;BaseQRankSum=5.299;DP=353;FS=6.426;HRun=10;HaplotypeScore=65.7344;InbreedingCoeff=0.6578;MQ=48.79;MQ0=22;MQRankSum=-1.985;QD=8.49;ReadPosRankSum=-0.497;VQSLOD=1.8948;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,1:15:7.07:0,7,288	1/1:2,1:3:5.99:49,6,0	1/1:22,0:1:2.22:7,2,0	0/0:29,1:11:3:0,3,30	1/1:4,0:3:4.07:12,4,0	1/1:6,0:15:24.22:71,24,0	1/1:4,0:4:3.59:10,4,0	1/1:17,20:31:28.82:463,29,0	1/1:2,3:4:6:52,6,0	1/1:8,9:11:29.98:258,30,0	1/1:7,7:10:20.99:179,21,0	0/0:3,0:3:3.01:0,3,33	0/1:10,1:8:4.97:5,0,175	0/0:5,0:4:6.02:0,6,66	1/1:1,0:4:8.15:24,8,0	1/1:1,0:8:16.30:47,16,0	1/1:17,10:27:41.81:356,42,0	1/1:9,0:11:12.22:35,12,0	0/0:15,0:15:3.62:0,4,50	0/0:5,0:10:14.25:0,14,72	0/0:1,0:2:2.84:0,3,14	./.	0/0:4,0:3:6.02:0,6,66	0/0:6,0:6:6.02:0,6,66	0/0:21,0:21:33.04:0,33,350	1/1:5,10:12:32.01:262,32,0	1/1:4,7:11:20.57:182,21,0	1/1:5,6:9:20.99:182,21,0
chr10	15255072	.	C	CT	2301.51	PASS	AB=0.950;AC=22;AF=0.423;AN=52;BaseQRankSum=1.727;DP=378;FS=2.910;HRun=8;HaplotypeScore=72.5204;InbreedingCoeff=0.5989;MQ=40.61;MQ0=32;MQRankSum=-4.228;QD=10.75;ReadPosRankSum=-1.208;VQSLOD=2.2649;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:20,2:18:24.20:0,24,343	1/1:0,2:2:3.01:35,3,0	./.	0/1:9,0:2:0:0,0,0	0/0:12,1:8:15.01:0,15,136	0/0:19,1:15:32.99:0,33,297	0/0:8,0:4:9:0,9,82	1/1:19,13:23:11.65:387,12,0	1/1:2,7:8:15.04:172,15,0	1/1:11,9:14:2.58:269,3,0	1/1:11,11:18:36.10:408,36,0	0/0:3,0:3:3:0,3,25	0/1:17,3:15:8.87:9,0,168	0/1:10,0:9:19.61:20,0,89	0/0:9,1:7:15.01:0,15,137	0/1:12,1:12:8.04:8,0,168	1/1:19,8:26:35.84:392,36,0	0/0:17,1:13:14.98:0,15,132	0/0:9,1:7:8.98:0,9,76	0/0:12,0:12:20.99:0,21,188	./.	0/0:6,1:7:9:0,9,82	0/0:10,1:9:6:0,6,55	0/0:6,0:6:6:0,6,55	0/0:18,0:18:35.84:0,36,325	1/1:8,12:14:33.05:355,33,0	1/1:7,10:15:26.83:294,27,0	1/1:7,6:11:12.03:135,12,0
chr10	15256063	.	CTTT	C	2795.76	PASS	AB=0.714;AC=25;AF=0.446;AN=56;BaseQRankSum=0.401;DP=500;FS=0.488;HRun=17;HaplotypeScore=90.4974;InbreedingCoeff=0.6979;MQ=70.15;MQ0=7;MQRankSum=-0.478;QD=11.85;ReadPosRankSum=4.912;VQSLOD=0.6888;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:39:81.14:0,81,1166	1/1:6,2:7:16.08:123,16,0	0/0:20,0:14:21.02:0,21,209	0/0:13,0:10:7.49:0,7,123	0/1:4,4:8:13.84:39,0,14	1/1:5,18:24:34.43:367,34,0	1/1:6,10:16:23.32:270,23,0	0/1:17,11:28:3.85:271,0,4	1/1:3,5:9:20.87:186,21,0	1/1:3,7:13:25.23:248,25,0	0/0:2,3:5:1.25:0,1,3	0/0:20,0:19:36.06:0,36,511	0/0:8,0:10:27.04:0,27,337	0/0:13,0:13:27.04:0,27,357	0/0:14,0:21:49.45:0,49,478	0/0:7,0:23:33.24:0,33,324	1/1:6,15:23:0.16:301,0,0	0/0:11,0:21:2.88:0,3,15	0/1:13,4:16:6.77:89,0,7	1/1:2,3:5:4.18:59,4,0	1/1:9,9:18:11.87:149,12,0	0/0:10,0:14:24.03:0,24,357	0/0:15,0:15:27.09:0,27,384	0/0:24,0:26:34.79:0,35,507	0/0:17,0:15:27.93:0,28,412	1/1:5,14:21:27.71:318,28,0	1/1:12,16:28:33.92:362,34,0	1/1:4,7:12:23.68:216,24,0
chr10	15256804	.	C	CCTT	5399.67	PASS	AB=1.000;AC=30;AF=0.536;AN=56;BaseQRankSum=-8.167;DP=549;FS=0.000;HRun=0;HaplotypeScore=130.5665;InbreedingCoeff=0.7626;MQ=58.67;MQ0=0;MQRankSum=5.059;QD=15.98;ReadPosRankSum=-0.878;VQSLOD=4.4466;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:21,13:34:69.13:1082,69,0	0/0:5,0:5:2.92:0,3,17	0/0:17,0:13:9.03:0,9,105	0/0:24,0:22:16.56:0,17,160	0/0:7,0:20:21.45:0,21,132	0/0:3,0:14:20.83:0,21,147	0/0:5,0:19:26.32:0,26,164	1/1:42,0:41:39.38:520,39,0	1/1:23,0:23:15.01:183,15,0	0/1:18,0:18:17.95:115,0,18	1/1:11,0:11:11.99:136,12,0	1/1:5,16:21:42.14:816,42,0	1/1:7,11:18:18.06:347,18,0	1/1:18,2:20:11.95:199,12,0	0/0:24,0:24:32.67:0,33,225	0/0:19,0:19:23.81:0,24,168	1/1:11,0:11:3.01:43,3,0	0/0:11,0:11:11.90:0,12,84	0/0:21,0:21:8.91:0,9,61	0/0:18,0:18:15.64:0,16,95	0/0:19,0:19:11.87:0,12,80	1/1:7,8:15:17.90:245,18,0	1/1:5,8:13:21.41:365,21,0	1/1:7,10:17:18.02:312,18,0	1/1:5,13:18:21.07:408,21,0	1/1:35,0:35:21.65:362,22,0	1/1:25,0:25:14.71:193,15,0	0/1:16,0:16:17.66:74,0,18
chr10	15256814	.	CTTCTTCTTCTTCTTCT	C	5176.72	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=4.892;DP=544;FS=0.572;HRun=0;HaplotypeScore=216.2970;InbreedingCoeff=0.9446;MQ=54.48;MQ0=11;MQRankSum=-5.336;QD=53.37;ReadPosRankSum=2.287;VQSLOD=4.2748;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:87.30:0,87,5089	0/0:5,0:5:12.04:0,12,415	0/0:24,0:14:35.95:0,36,1306	0/0:18,0:14:32.93:0,33,1173	0/0:20,0:19:48.14:0,48,1278	0/0:16,0:16:30.09:0,30,844	0/0:19,0:18:39.13:0,39,1079	0/0:44,0:42:99:0,99,4685	0/0:26,0:25:30.57:0,31,1322	0/0:19,0:18:42.61:0,43,2034	0/0:13,0:13:15.05:0,15,763	0/0:21,0:21:57.18:0,57,3338	0/0:18,0:18:35.43:0,35,1755	0/0:18,0:19:24.45:0,24,1247	1/1:1,21:22:33.11:1495,33,0	1/1:1,14:15:24.08:1132,24,0	0/0:10,0:8:3.01:0,3,201	1/1:0,11:11:12.04:566,12,0	1/1:3,12:14:33.03:701,33,0	1/1:0,16:16:27.02:739,27,0	1/1:1,17:18:15.04:543,15,0	0/0:17,0:16:42.14:0,42,1819	0/0:12,0:12:33.57:0,34,1597	0/0:17,0:16:33.08:0,33,1636	0/0:22,0:22:39.13:0,39,2104	0/0:39,0:39:97.26:0,97,5200	0/0:26,0:25:23.32:0,23,1266	0/0:10,0:10:27.04:0,27,979
chr10	15256829	.	CT	C	626.51	PASS	AB=0.895;AC=18;AF=0.321;AN=56;BaseQRankSum=3.896;DP=528;FS=3.578;HRun=11;HaplotypeScore=118.7546;InbreedingCoeff=0.4557;MQ=49.40;MQ0=19;MQRankSum=-5.088;QD=2.69;ReadPosRankSum=-0.410;VQSLOD=0.6629;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:35:73.35:0,73,538	0/1:1,3:4:6.04:62,0,6	0/1:17,1:8:15.78:16,0,57	0/0:12,0:8:7.43:0,7,52	0/0:19,0:18:15.26:0,15,136	0/0:14,0:14:14.74:0,15,86	0/0:22,0:21:28.39:0,28,192	0/1:33,7:37:84.54:85,0,113	0/0:22,0:21:9.62:0,10,30	0/1:20,0:19:64.83:65,0,67	0/1:14,0:14:6.32:6,0,8	0/0:21,0:21:47.40:0,47,326	0/0:16,0:16:26.77:0,27,204	0/0:23,0:23:26.21:0,26,209	1/1:22,0:21:26.07:118,26,0	1/1:14,0:14:22.38:103,22,0	0/0:14,0:12:2.50:0,2,9	1/1:13,0:12:11.19:52,11,0	1/1:13,0:12:14.58:99,15,0	1/1:17,0:17:8.59:50,9,0	1/1:18,0:18:11.39:63,11,0	0/0:13,0:12:18.78:0,19,153	0/0:8,0:8:17.72:0,18,112	0/0:17,0:15:26.38:0,26,191	0/0:22,0:22:32.72:0,33,258	0/1:40,0:40:93.79:94,0,162	0/0:29,0:26:11.53:0,12,39	0/0:5,0:5:4.16:0,4,33
chr10	15256830	.	T	TTCTTCTTCTTC	8037.37	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=-9.781;DP=554;FS=7.512;HRun=0;HaplotypeScore=173.2807;InbreedingCoeff=0.7178;MQ=49.16;MQ0=20;MQRankSum=-2.738;QD=30.79;ReadPosRankSum=-3.974;VQSLOD=2.7894;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:35:84.98:0,85,818	1/1:4,0:4:12:131,12,0	0/0:16,0:6:16.19:0,16,224	0/0:12,0:8:11.89:0,12,308	0/0:20,0:19:34.22:0,34,453	0/0:15,0:14:27.09:0,27,664	0/0:22,0:21:42.92:0,43,683	1/1:33,0:36:49.80:1097,50,0	1/1:3,18:21:14.92:673,15,0	1/1:1,13:24:56.21:1353,56,0	1/1:1,11:14:12.04:595,12,0	0/0:21,0:21:48.09:0,48,475	0/0:15,0:15:27.52:0,28,270	0/0:13,0:23:26.90:0,27,264	0/0:24,0:23:33.04:0,33,665	0/0:14,0:14:24.08:0,24,566	1/1:6,1:21:3.01:128,3,0	0/0:13,0:12:12.04:0,12,278	0/1:16,0:15:76.56:77,0,143	0/1:17,0:17:5.73:6,0,183	0/1:18,0:18:9.63:10,0,171	0/0:14,0:12:24.90:0,25,232	0/0:8,0:8:4.68:0,5,145	0/0:17,0:15:26.37:0,26,223	0/0:20,0:20:33.06:0,33,332	1/1:2,33:44:83.62:2967,84,0	1/1:5,20:30:14.06:834,14,0	1/1:6,0:6:13.25:166,13,0
chr10	15256984	.	TGC	T	1513.59	PASS	AB=0.883;AC=10;AF=0.179;AN=56;BaseQRankSum=0.382;DP=556;FS=2.634;HRun=0;HaplotypeScore=123.5023;InbreedingCoeff=0.0416;MQ=52.83;MQ0=16;MQRankSum=2.981;QD=6.98;ReadPosRankSum=2.098;VQSLOD=3.3270;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:22,8:27:99:205,0,288	0/0:11,0:11:15.05:0,15,266	0/0:14,0:6:18.01:0,18,265	0/0:20,1:9:20.94:0,21,298	0/0:22,0:22:17.68:0,18,298	0/0:14,0:14:18.87:0,19,257	0/0:29,0:29:48.59:0,49,594	0/0:13,0:13:38.94:0,39,576	0/0:22,0:21:20.05:0,20,433	0/0:15,0:14:36.12:0,36,606	0/0:11,0:11:27.09:0,27,457	0/0:18,0:17:26.73:0,27,394	0/1:13,0:13:5.43:5,0,249	0/1:20,0:20:2.65:3,0,422	0/0:20,0:20:23.08:0,23,243	0/1:15,1:14:32.50:33,0,35	0/0:19,0:18:20.99:0,21,321	0/1:24,2:26:43.69:44,0,300	0/1:16,0:13:48.25:191,0,48	1/1:1,13:14:17.99:251,18,0	0/1:17,50:64:28.03:848,0,28	0/0:17,0:17:29.57:0,30,481	0/0:9,0:9:14.49:0,14,179	0/0:43,0:42:43.80:0,44,543	0/1:12,3:14:77.60:78,0,281	0/0:19,0:19:43.85:0,44,645	0/0:16,0:15:27.07:0,27,455	0/0:6,0:6:15.01:0,15,189
chr10	15256986	.	C	CGTGT	1141.64	PASS	AB=0.943;AC=18;AF=0.321;AN=56;BaseQRankSum=1.960;DP=573;FS=10.930;HRun=0;HaplotypeScore=142.1194;InbreedingCoeff=-0.2001;MQ=52.73;MQ0=16;MQRankSum=0.533;QD=2.99;ReadPosRankSum=0.410;VQSLOD=2.1656;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:31,0:29:99:119,0,179	0/0:11,0:11:7.56:0,8,34	0/0:16,0:6:15.02:0,15,176	0/0:21,0:10:13.55:0,14,137	0/1:15,0:22:16.11:16,0,194	0/1:12,0:15:1.58:2,0,150	0/1:27,0:30:1.52:2,0,284	0/0:18,0:18:35.32:0,35,245	0/0:21,0:20:3.34:0,3,16	0/0:14,0:13:8.55:0,9,108	0/0:12,0:12:2.21:0,2,69	0/1:13,0:18:21.17:21,0,166	0/1:13,0:13:19.91:20,0,110	0/1:20,0:20:27.72:28,0,242	1/1:4,15:21:12:241,12,0	1/1:4,1:17:5.84:72,6,0	0/0:20,0:19:5.72:0,6,25	0/1:7,20:28:7.27:459,0,7	0/1:16,0:14:35.79:48,0,36	0/1:13,0:13:43.55:44,0,47	0/1:65,0:63:83.91:84,0,289	0/0:17,0:17:24.32:0,24,331	0/1:9,0:9:16.19:16,0,62	0/1:42,0:42:54.11:54,0,153	0/1:15,0:14:70.66:71,0,169	0/0:19,0:19:11.40:0,11,98	0/0:18,0:17:4.68:0,5,59	0/0:3,0:3:3.37:0,3,10
chr10	15256988	.	TGC	T	2084.14	PASS	AB=1.000;AC=16;AF=0.286;AN=56;BaseQRankSum=-0.949;DP=568;FS=2.281;HRun=0;HaplotypeScore=124.1434;InbreedingCoeff=0.0528;MQ=52.46;MQ0=17;MQRankSum=3.153;QD=6.74;ReadPosRankSum=0.674;VQSLOD=3.5763;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:30:99:203,0,114	0/0:11,0:11:12.44:0,12,99	0/0:15,0:5:14.80:0,15,124	0/0:23,0:10:16.58:0,17,145	0/1:21,0:21:99:141,0,118	0/1:15,0:15:99:100,0,111	0/1:29,0:29:99:123,0,349	0/1:19,0:19:15.35:15,0,170	0/0:21,0:20:19.57:0,20,179	0/0:15,0:14:14.91:0,15,200	0/0:12,0:12:1.70:0,2,158	0/0:17,0:16:15.16:0,15,162	0/1:13,0:13:12.28:12,0,63	0/1:19,0:19:6.01:6,0,166	0/0:19,0:19:5.78:0,6,16	0/1:19,0:17:10.16:34,0,10	0/0:19,0:18:3.45:0,3,88	0/1:30,0:30:30.43:149,0,30	1/1:10,7:14:25.17:262,25,0	1/1:13,0:13:17.99:253,18,0	1/1:66,0:63:11.78:869,12,0	0/0:17,0:17:29.41:0,29,212	0/0:9,0:9:11.45:0,11,90	0/0:43,0:42:40.64:0,41,314	0/1:15,0:14:82.66:83,0,159	0/0:18,0:18:3.92:0,4,184	0/0:16,0:15:20.89:0,21,191	0/0:3,0:3:6:0,6,52
chr10	15256990	.	C	CGTGTGT	3003.84	PASS	AB=0.861;AC=27;AF=0.482;AN=56;BaseQRankSum=-7.667;DP=587;FS=1.961;HRun=0;HaplotypeScore=157.1318;InbreedingCoeff=0.3349;MQ=52.61;MQ0=18;MQRankSum=-0.513;QD=6.99;ReadPosRankSum=-2.928;VQSLOD=2.3100;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:31,1:29:15.10:420,15,0	0/1:11,0:11:6.44:6,0,44	0/0:17,0:5:6.02:0,6,117	0/1:23,0:10:15.68:16,0,105	0/0:14,0:22:30.09:0,30,487	0/0:11,0:14:21.94:0,22,342	0/0:26,0:29:53.69:0,54,737	0/1:10,0:20:0.93:1,0,41	0/0:20,0:19:14.78:0,15,106	0/0:17,0:16:19.72:0,20,141	0/1:9,0:12:2.03:2,0,83	1/1:16,0:15:5.99:48,6,0	1/1:5,8:13:3.48:91,3,0	0/1:12,8:25:8.53:160,0,9	1/1:18,0:18:11.35:173,11,0	1/1:19,0:17:7.92:187,8,0	0/1:22,0:21:0:0,0,38	1/1:31,0:31:33.07:507,33,0	1/1:17,0:14:16.27:232,16,0	0/1:13,0:13:2.44:199,0,2	0/1:66,0:65:53.28:661,0,53	0/1:8,10:19:0.03:0,0,0	0/1:4,6:12:4.05:92,0,4	0/1:12,30:43:5.87:161,0,6	1/1:12,2:14:12.04:222,12,0	0/0:19,0:19:7.24:0,7,90	0/0:16,0:15:19.30:0,19,146	0/0:3,0:3:5.90:0,6,36
chr10	15256992	.	T	TGC	2747.07	PASS	AB=1.000;AC=30;AF=0.536;AN=56;BaseQRankSum=5.287;DP=603;FS=1.632;HRun=0;HaplotypeScore=134.4730;InbreedingCoeff=-0.0004;MQ=52.63;MQ0=18;MQRankSum=0.779;QD=5.83;ReadPosRankSum=3.418;VQSLOD=3.4088;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:31,0:29:70.83:71,0,134	1/1:1,10:11:12.04:218,12,0	0/0:20,0:6:14.96:0,15,155	0/0:24,0:10:18.01:0,18,215	0/0:24,0:24:45.43:0,45,424	0/0:14,0:14:32.15:0,32,326	0/0:29,0:29:18.58:0,19,642	0/1:19,0:19:12.68:159,0,13	1/1:3,17:19:13.02:420,13,0	1/1:2,15:17:23.90:380,24,0	1/1:12,2:14:12.03:240,12,0	0/1:16,0:15:10.28:10,0,58	0/1:13,0:13:14.74:15,0,37	0/1:25,0:25:33.61:34,0,136	0/1:20,0:20:15.75:16,0,37	0/1:18,0:16:15:18,0,15	1/1:2,21:26:15.05:270,15,0	0/1:31,0:31:22.90:23,0,80	0/1:19,0:16:7.65:8,0,201	0/1:13,0:13:30.91:31,0,69	0/1:67,0:64:86.82:87,0,415	0/0:19,0:19:8.82:0,9,150	0/1:12,0:12:4.86:5,0,55	0/1:42,0:41:17.40:17,0,106	0/1:15,0:14:25.32:25,0,77	1/1:4,16:20:38.88:455,39,0	1/1:2,15:16:11.79:320,12,0	1/1:0,3:3:6.02:110,6,0
chr10	15258293	.	G	GTGAA	10736.73	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-16.034;DP=610;FS=0.351;HRun=0;HaplotypeScore=157.5889;InbreedingCoeff=0.9949;MQ=88.10;MQ0=0;MQRankSum=-5.706;QD=55.06;ReadPosRankSum=2.686;VQSLOD=6.1552;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,17:27:47.99:1077,48,0	0/0:7,0:7:21.07:0,21,382	0/0:18,0:18:51.17:0,51,914	0/0:29,0:29:74.58:0,75,1225	0/0:11,0:11:27.08:0,27,461	0/0:17,0:17:51.16:0,51,897	0/0:26,0:26:60.16:0,60,1027	0/0:31,0:31:87.30:0,87,1575	0/0:23,0:23:60.21:0,60,1090	0/0:25,0:25:66.23:0,66,1199	0/0:12,0:12:33.09:0,33,568	1/1:3,18:25:60.21:1568,60,0	1/1:2,21:28:69.24:1784,69,0	1/1:7,20:32:68.41:1739,68,0	0/0:25,0:25:66.16:0,66,1171	0/0:28,0:28:78.27:0,78,1419	0/0:24,0:24:66.21:0,66,1171	0/0:24,0:24:63.22:0,63,1146	0/0:17,0:17:42.14:0,42,737	0/0:8,0:8:18.04:0,18,297	0/0:45,0:45:99:0,126,2231	1/1:1,13:16:44.98:859,45,0	1/1:2,9:11:27.05:648,27,0	1/1:3,30:35:75.22:1906,75,0	1/1:2,16:21:51.05:1155,51,0	0/0:21,0:21:57.20:0,57,1031	0/0:19,0:19:54.15:0,54,911	0/0:5,0:5:15.03:0,15,241
chr10	15261577	.	AGT	A	7304.92	PASS	AB=0.950;AC=31;AF=0.554;AN=56;BaseQRankSum=4.801;DP=776;FS=1.536;HRun=0;HaplotypeScore=136.2198;InbreedingCoeff=0.8884;MQ=66.77;MQ0=20;MQRankSum=0.052;QD=16.87;ReadPosRankSum=1.429;VQSLOD=5.1175;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,1:40:57.45:0,57,1255	1/1:4,9:13:30.09:358,30,0	0/1:36,1:15:26.19:26,0,65	0/0:44,0:25:18.77:0,19,167	1/1:10,20:27:36.04:413,36,0	1/1:3,18:23:35.94:407,36,0	1/1:9,18:30:28.54:450,29,0	1/1:12,15:22:21.42:365,21,0	1/1:7,19:27:50.99:586,51,0	1/1:10,23:31:54.31:683,54,0	1/1:3,12:15:24.07:286,24,0	0/0:26,2:28:0.73:0,1,930	0/0:23,2:25:21.44:0,21,820	0/0:26,0:26:66.18:0,66,977	0/0:28,2:31:42.46:0,42,1064	0/0:28,0:28:60.18:0,60,918	1/1:8,24:32:57.17:679,57,0	0/0:17,0:17:51.15:0,51,773	1/1:6,15:21:36.05:398,36,0	1/1:3,23:24:51.16:608,51,0	1/1:23,25:47:54.68:739,55,0	0/0:25,0:25:21.44:0,21,807	0/0:23,1:24:15.36:0,15,681	0/0:35,1:36:49.77:0,50,1213	0/0:18,0:18:36.12:0,36,565	1/1:6,22:29:65.54:742,66,0	1/1:9,12:21:20.73:228,21,0	1/1:4,10:16:23.78:337,24,0
chr10	15261981	.	C	CGTGT	3799.58	PASS	AB=0.887;AC=43;AF=0.768;AN=56;BaseQRankSum=-2.408;DP=816;FS=37.504;HRun=0;HaplotypeScore=222.4826;InbreedingCoeff=0.5011;MQ=58.01;MQ0=16;MQRankSum=-0.051;QD=5.89;ReadPosRankSum=3.309;VQSLOD=1.3598;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:37,0:35:5.99:49,6,0	0/1:12,0:11:11.46:42,0,11	0/0:44,0:24:7.93:0,8,39	0/0:45,0:23:4.63:0,5,15	0/0:13,0:27:12.01:0,12,112	0/0:10,0:22:15.02:0,15,139	0/0:11,0:33:24.03:0,24,224	1/1:30,0:28:25.03:163,25,0	0/1:17,0:17:8.74:49,0,9	1/1:32,0:32:25.88:271,26,0	1/1:25,0:24:11.93:96,12,0	1/1:22,0:22:8.65:65,9,0	1/1:22,0:22:15.23:153,15,0	1/1:19,0:19:9.68:73,10,0	1/1:31,0:30:29.60:246,30,0	1/1:33,0:34:47.96:432,48,0	1/1:34,0:34:2.40:80,2,0	1/1:24,0:23:27.01:340,27,0	1/1:17,0:15:12.48:109,12,0	1/1:6,18:26:8.57:211,9,0	0/1:35,30:71:42.12:346,0,42	1/1:31,0:31:9.71:74,10,0	1/1:20,0:18:2.66:21,3,0	1/1:42,0:40:14.80:107,15,0	1/1:30,0:30:18:169,18,0	1/1:35,0:34:39.70:441,40,0	1/1:22,0:22:6.93:181,7,0	1/1:9,0:8:3.70:81,4,0
chr10	15262010	.	GTC	G	2497.95	PASS	AB=0.891;AC=25;AF=0.446;AN=56;BaseQRankSum=10.141;DP=757;FS=19.981;HRun=0;HaplotypeScore=213.1863;InbreedingCoeff=0.2004;MQ=48.11;MQ0=15;MQRankSum=-8.168;QD=5.49;ReadPosRankSum=-1.599;VQSLOD=1.5632;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,1:35:14.53:0,15,381	1/1:2,9:10:12.04:147,12,0	0/0:20,0:11:7.75:0,8,161	0/0:46,0:24:17.07:0,17,274	0/0:22,0:22:32.73:0,33,220	0/0:21,0:21:36.61:0,37,245	0/0:28,0:27:35.69:0,36,208	0/0:20,0:17:14.11:0,14,96	1/1:17,4:21:43.76:321,44,0	1/1:26,3:30:65.35:517,65,0	1/1:22,8:29:14.10:103,14,0	0/1:16,5:21:34.16:34,0,211	0/1:18,2:20:58.17:58,0,154	0/1:14,5:19:54.28:54,0,118	0/1:34,0:33:27.29:27,0,284	0/1:40,0:40:81.40:81,0,281	1/1:5,27:30:19.91:159,20,0	0/1:21,0:19:19.66:20,0,263	0/1:17,0:13:4.18:4,0,118	0/0:24,0:24:34.38:0,34,308	0/0:58,0:57:51.83:0,52,661	0/1:25,5:30:55.60:56,0,161	0/0:24,2:23:1.05:0,1,126	0/1:31,5:33:65.84:66,0,197	0/1:26,4:30:34.02:34,0,193	1/1:22,9:30:57.67:500,58,0	1/1:12,9:21:44.68:399,45,0	0/1:6,4:9:2.19:106,0,2
chr10	15262014	.	GTC	G	2117.09	PASS	AB=0.976;AC=22;AF=0.393;AN=56;BaseQRankSum=12.530;DP=754;FS=25.560;HRun=0;HaplotypeScore=214.9091;InbreedingCoeff=0.2208;MQ=50.37;MQ0=15;MQRankSum=-7.772;QD=5.50;ReadPosRankSum=-1.162;VQSLOD=1.6576;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:37:22.83:0,23,975	1/1:11,0:10:12.04:147,12,0	0/1:19,0:10:7.67:8,0,272	0/0:51,1:28:15.93:0,16,764	0/0:22,0:22:35.66:0,36,520	0/0:22,0:22:41.83:0,42,594	0/0:29,0:28:44.70:0,45,508	0/0:20,0:17:13.97:0,14,198	1/1:19,0:19:38.90:284,39,0	1/1:27,1:28:61.75:484,62,0	1/1:27,1:27:6.02:39,6,0	0/1:24,0:24:25.90:26,0,640	0/1:21,0:20:58.27:58,0,418	0/1:20,0:20:50.99:51,0,334	0/0:36,0:35:3.84:0,4,686	0/1:39,0:39:71.42:71,0,696	1/1:31,1:30:15.98:135,16,0	0/1:21,0:19:17.08:17,0,525	0/0:16,0:13:35.87:0,36,467	0/0:24,0:23:34.51:0,35,632	0/0:51,0:50:75.20:0,75,1371	0/1:29,1:30:32.32:32,0,385	0/0:24,0:23:0.75:0,1,328	0/0:32,0:29:5.20:0,5,488	0/1:30,0:30:32.63:33,0,431	0/1:29,3:30:0.20:416,0,0	1/1:21,1:22:46.26:416,46,0	0/1:6,1:6:9.97:85,0,10
chr10	15262022	.	GTC	G	1805.62	PASS	AB=0.983;AC=19;AF=0.339;AN=56;BaseQRankSum=13.445;DP=748;FS=20.505;HRun=0;HaplotypeScore=213.9855;InbreedingCoeff=0.6331;MQ=54.60;MQ0=15;MQRankSum=-9.101;QD=6.87;ReadPosRankSum=-0.120;VQSLOD=1.7502;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:38:65.67:0,66,1126	1/1:11,0:10:12.04:148,12,0	0/0:26,0:14:18.41:0,18,482	0/0:60,1:40:43.91:0,44,1049	0/0:19,0:19:35.66:0,36,523	0/0:21,0:21:41.83:0,42,595	0/0:28,0:27:56.72:0,57,663	0/1:20,0:17:27.82:28,0,240	1/1:19,0:19:38.10:285,38,0	1/1:27,0:27:55.33:422,55,0	0/1:28,0:27:4.39:19,0,4	0/0:23,0:23:28.28:0,28,728	0/1:22,0:21:9.39:9,0,512	0/1:18,1:19:10.80:11,0,363	0/0:34,0:33:56.21:0,56,903	0/0:34,0:34:62.98:0,63,1045	1/1:28,0:26:12.60:117,13,0	0/0:22,0:20:46.49:0,46,776	0/0:15,0:12:35.95:0,36,500	0/0:27,0:26:49.53:0,50,812	0/0:47,0:46:78.21:0,78,1399	0/0:31,2:33:40.22:0,40,646	0/0:21,0:21:21.07:0,21,382	0/0:31,0:28:33.11:0,33,601	0/1:27,1:28:8.55:9,0,510	1/1:29,0:27:51.76:450,52,0	1/1:21,0:21:42.08:384,42,0	1/1:11,0:10:15.37:124,15,0
chr10	15262026	.	GTC	G	1913.10	PASS	AB=0.906;AC=18;AF=0.321;AN=56;BaseQRankSum=12.863;DP=759;FS=20.632;HRun=0;HaplotypeScore=211.7390;InbreedingCoeff=0.6311;MQ=56.50;MQ0=14;MQRankSum=-9.725;QD=8.21;ReadPosRankSum=-1.333;VQSLOD=1.6671;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:40,2:40:71.76:0,72,1240	1/1:9,0:8:12.04:149,12,0	0/0:29,0:17:30.86:0,31,599	0/0:65,1:47:36.50:0,36,1248	0/0:21,0:21:41.57:0,42,588	0/0:22,0:22:47.77:0,48,664	0/0:29,0:28:55.10:0,55,682	0/1:21,0:19:77.18:77,0,107	1/1:19,0:19:35.15:265,35,0	1/1:25,0:25:50.47:417,50,0	0/0:26,0:25:3.94:0,4,25	0/0:20,4:24:29.37:0,29,754	0/1:19,3:22:22.45:22,0,594	0/1:16,4:20:27.33:27,0,415	0/0:33,0:32:30.41:0,30,837	0/0:32,0:32:26.06:0,26,845	1/1:25,0:23:14.04:141,14,0	0/0:23,0:21:0.91:0,1,674	0/0:14,0:11:28.87:0,29,408	0/0:26,0:25:49.56:0,50,837	0/0:47,0:46:84.19:0,84,1445	0/0:32,3:35:43.21:0,43,702	0/0:19,4:22:24.06:0,24,408	0/0:29,5:31:35.84:0,36,634	0/1:27,3:30:3.79:4,0,567	1/1:28,0:26:51.70:471,52,0	1/1:22,0:22:41.87:383,42,0	1/1:12,0:12:20.49:152,20,0
chr10	15262028	.	CTG	C	359.30	PASS	AB=0.984;AC=10;AF=0.179;AN=56;BaseQRankSum=10.188;DP=744;FS=41.058;HRun=0;HaplotypeScore=210.3832;InbreedingCoeff=0.0112;MQ=57.04;MQ0=13;MQRankSum=-6.306;QD=1.94;ReadPosRankSum=-1.273;VQSLOD=1.2663;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:41:74.77:0,75,1267	1/1:8,0:7:11.77:78,12,0	0/0:30,0:18:23:0,23,691	0/0:65,0:47:67.09:0,67,1383	0/0:21,0:21:41.91:0,42,600	0/0:22,0:22:48:0,48,682	0/0:29,0:28:62.95:0,63,789	0/0:22,0:20:31.83:0,32,235	0/1:17,0:17:31.38:31,0,37	0/1:24,0:24:65.70:71,0,66	0/0:20,0:20:9.06:0,9,75	0/0:25,0:25:51.04:0,51,823	0/0:22,0:22:37.49:0,37,697	0/0:20,0:20:14.49:0,14,467	0/0:28,5:32:11.49:0,11,824	0/1:30,3:33:31.99:32,0,785	0/1:25,0:23:32.72:33,0,35	0/1:22,1:21:52.91:53,0,657	0/0:13,0:11:29.39:0,29,405	0/0:25,0:24:52.44:0,52,840	0/0:46,0:45:81.26:0,81,1395	0/0:35,0:35:48.02:0,48,739	0/0:23,0:22:27.07:0,27,432	0/0:34,0:31:36.11:0,36,620	0/0:30,0:30:22.16:0,22,602	0/1:23,0:22:18.72:99,0,19	0/1:20,0:20:26.42:100,0,26	0/1:12,0:12:9.65:10,0,69
chr10	15262424	.	ATTTAGGACT	A	12655.36	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=18.057;DP=753;FS=2.845;HRun=0;HaplotypeScore=212.8878;InbreedingCoeff=0.9999;MQ=80.43;MQ0=0;MQRankSum=-18.486;QD=54.31;ReadPosRankSum=0.915;VQSLOD=4.8526;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,34:35:68.98:1513,69,0	0/0:16,0:16:48.16:0,48,2230	0/0:26,0:26:66.23:0,66,2972	0/0:24,0:24:66.23:0,66,2808	0/0:29,0:29:81.28:0,81,3738	0/0:31,0:31:87.30:0,87,3858	0/0:31,0:31:81.28:0,81,3677	0/0:29,0:29:81.28:0,81,3781	0/0:28,0:28:78.27:0,78,3530	0/0:39,0:39:99:0,114,5243	0/0:15,0:15:42.14:0,42,1980	1/1:2,30:32:75.26:2190,75,0	1/1:3,36:39:87.30:2535,87,0	1/1:2,29:31:60.20:1769,60,0	0/0:30,0:30:90.31:0,90,4168	0/0:34,0:34:93.32:0,93,4380	0/0:25,0:25:75.26:0,75,3473	0/0:20,0:20:60.21:0,60,2714	0/0:17,0:17:45.15:0,45,2055	0/0:27,0:27:81.28:0,81,3866	0/0:13,0:13:39.12:0,39,1710	1/1:2,27:29:72.04:1622,72,0	1/1:3,22:25:39.05:1059,39,0	1/1:3,18:21:29.56:766,30,0	1/1:4,17:21:42.10:1201,42,0	0/0:40,0:40:99:0,117,5254	0/0:29,0:29:84.29:0,84,4039	0/0:17,0:17:45.15:0,45,1833
chr10	15263827	.	A	ATTT	7713.19	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=-6.318;DP=658;FS=1.985;HRun=12;HaplotypeScore=111.8970;InbreedingCoeff=0.8963;MQ=72.33;MQ0=0;MQRankSum=-3.180;QD=30.37;ReadPosRankSum=-2.466;VQSLOD=3.6799;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:46.57:0,47,642	1/1:0,5:8:21.03:343,21,0	0/0:15,0:15:2.88:0,3,161	0/1:16,0:16:12.86:13,0,118	0/0:29,0:30:45.32:0,45,637	0/0:34,0:34:84.09:0,84,933	0/0:20,0:21:40.38:0,40,467	1/1:16,24:47:92.67:1393,93,0	1/1:6,12:20:29.11:451,29,0	1/1:13,14:34:61.39:891,61,0	1/1:8,12:21:37.66:596,38,0	0/0:27,0:27:69.06:0,69,755	0/0:30,0:31:65.79:0,66,692	0/0:18,0:18:48.12:0,48,538	0/0:24,0:25:64.55:0,65,718	0/0:17,0:18:25.16:0,25,449	1/1:7,21:32:78.21:1288,78,0	0/0:18,0:18:38.80:0,39,396	0/0:9,0:27:50.57:0,51,302	0/0:3,0:20:48.64:0,49,305	0/0:8,0:29:52.92:0,53,334	0/0:18,0:19:37.38:0,37,411	0/0:21,0:21:51.03:0,51,572	0/0:16,0:16:36.01:0,36,404	0/0:9,0:9:21.02:0,21,236	1/1:3,18:23:63.17:1053,63,0	1/1:6,18:32:55.36:862,55,0	1/1:1,16:21:48.14:824,48,0
chr10	15264086	.	TTC	T	597.65	PASS	AB=1.000;AC=8;AF=0.143;AN=56;BaseQRankSum=0.090;DP=444;FS=0.000;HRun=0;HaplotypeScore=64.3757;InbreedingCoeff=0.7157;MQ=67.55;MQ0=12;MQRankSum=-2.970;QD=9.34;ReadPosRankSum=-2.808;VQSLOD=2.5871;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:33:47.69:0,48,591	0/0:6,0:6:14.62:0,15,150	0/0:20,0:13:17.64:0,18,222	0/0:14,0:10:10.70:0,11,178	0/0:14,0:13:26.23:0,26,178	0/0:13,0:13:22.06:0,22,206	0/0:11,0:9:20.96:0,21,202	0/0:25,0:24:48.12:0,48,464	0/0:12,0:12:20.64:0,21,214	0/0:24,0:23:49.14:0,49,463	0/0:10,0:10:25.53:0,26,214	0/1:10,0:10:23.78:24,0,141	0/0:13,0:13:20.27:0,20,208	0/0:12,0:12:28.78:0,29,246	0/1:14,0:13:3.98:4,0,181	0/0:10,0:10:22.18:0,22,204	0/0:31,0:29:68.04:0,68,654	0/0:15,0:14:21.20:0,21,324	1/1:13,1:14:28.05:318,28,0	1/1:4,11:14:23.75:181,24,0	1/1:9,2:10:20.99:221,21,0	0/0:11,0:11:24.57:0,25,173	0/0:24,1:24:23.98:0,24,403	0/0:18,0:17:19.94:0,20,191	0/0:11,0:11:22.54:0,23,211	0/0:25,0:24:57.69:0,58,575	0/0:13,0:13:29.78:0,30,271	0/0:13,0:12:29.42:0,29,256
chr10	15266442	.	CAGAG	C	3476.22	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=10.430;DP=607;FS=3.743;HRun=0;HaplotypeScore=98.9539;InbreedingCoeff=0.9995;MQ=79.34;MQ0=0;MQRankSum=-1.569;QD=46.35;ReadPosRankSum=2.814;VQSLOD=4.1969;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:90.31:0,90,2327	0/0:9,0:9:27.08:0,27,655	0/0:23,0:23:63.11:0,63,1467	0/0:20,0:20:43.20:0,43,1048	0/0:33,0:33:87.26:0,87,2181	0/0:19,0:19:51.18:0,51,1325	0/0:14,0:14:39.13:0,39,998	0/0:20,0:20:57.19:0,57,1443	0/0:21,0:21:63.22:0,63,1627	0/0:31,0:31:93.32:0,93,2424	0/0:14,0:14:42.14:0,42,1107	0/0:26,0:26:72.22:0,72,1789	0/0:32,0:32:90.31:0,90,2302	0/0:20,0:20:57.20:0,57,1502	1/1:0,24:24:69.24:1268,69,0	1/1:0,32:32:72.25:1325,72,0	0/0:36,0:36:99:0,102,2594	1/1:2,17:19:48.16:883,48,0	0/0:16,0:16:42.14:0,42,1016	0/0:22,0:22:60.21:0,60,1564	0/0:22,0:22:57.20:0,57,1488	0/0:15,0:15:45.12:0,45,1073	0/0:12,0:12:33.11:0,33,857	0/0:18,0:18:48.16:0,48,1256	0/0:23,0:23:63.22:0,63,1635	0/0:20,0:20:51.17:0,51,1274	0/0:22,0:22:66.23:0,66,1727	0/0:13,0:13:39.13:0,39,1027
chr10	15274321	.	G	GACACACAC	8474.26	PASS	AB=0.701;AC=45;AF=0.804;AN=56;BaseQRankSum=0.364;DP=676;FS=0.706;HRun=0;HaplotypeScore=210.1803;InbreedingCoeff=0.0193;MQ=56.52;MQ0=9;MQRankSum=-4.638;QD=13.49;ReadPosRankSum=-2.822;VQSLOD=3.0799;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:32,7:46:5.60:220,6,0	1/1:11,0:10:9.03:182,9,0	0/0:28,0:20:1.33:0,1,77	0/0:20,0:13:3.01:0,3,53	0/1:11,0:26:9.02:9,0,188	0/1:8,0:18:17.85:18,0,269	0/1:14,0:23:27.85:28,0,73	1/1:32,0:32:45.21:789,45,0	1/1:21,0:22:21.07:695,21,0	1/1:22,0:22:49.51:1190,50,0	1/1:23,1:27:5.51:44,6,0	1/1:15,11:29:6.01:474,6,0	1/1:11,0:22:6.02:208,6,0	1/1:21,0:22:23.85:451,24,0	1/1:13,0:32:1.69:188,2,0	0/1:9,0:21:57.74:105,0,58	1/1:11,0:15:12.04:372,12,0	0/1:9,0:25:4.81:102,0,5	1/1:9,0:10:6.02:106,6,0	0/1:7,0:17:4.08:172,0,4	0/1:41,0:42:1.40:160,0,1	1/1:9,4:15:3.01:123,3,0	1/1:13,1:25:1.40:73,1,0	1/1:22,11:39:9.03:282,9,0	1/1:9,10:25:26.83:772,27,0	1/1:20,0:23:39.13:833,39,0	1/1:27,0:26:21.07:563,21,0	1/1:6,0:6:12.04:317,12,0
chr10	15275163	.	TGTGC	T	1086.09	PASS	AB=0.990;AC=19;AF=0.339;AN=56;BaseQRankSum=-4.715;DP=543;FS=5.476;HRun=0;HaplotypeScore=113.7019;InbreedingCoeff=0.2265;MQ=69.03;MQ0=3;MQRankSum=2.556;QD=3.92;ReadPosRankSum=2.501;VQSLOD=1.9044;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:5.99:0,6,48	0/1:9,0:9:0:0,0,1	0/0:20,0:16:2.97:0,3,20	0/0:15,0:11:1.82:0,2,22	0/0:17,0:16:11.91:0,12,87	0/0:17,0:17:20.77:0,21,336	0/0:26,0:26:17.56:0,18,172	1/1:14,0:14:14.06:115,14,0	1/1:21,1:22:3.46:48,3,0	1/1:19,0:19:17.29:146,17,0	1/1:5,2:7:8.99:96,9,0	0/0:21,0:21:8.93:0,9,91	0/0:18,0:18:5.70:0,6,65	0/0:24,0:24:3:0,3,25	0/1:18,0:18:94.64:117,0,95	0/1:19,0:19:50.90:51,0,115	0/1:40,0:39:0.13:16,0,0	0/1:22,0:22:85.88:86,0,176	0/1:18,0:18:35.47:39,0,35	0/1:10,0:10:3.22:83,0,3	0/1:45,0:45:99:182,0,216	0/0:11,0:11:5.94:0,6,41	0/0:15,0:15:11.93:0,12,130	0/0:21,0:21:11.98:0,12,125	0/0:16,0:16:14.95:0,15,184	1/1:24,0:24:21.85:172,22,0	0/0:19,0:19:1.88:0,2,3	0/1:9,1:10:33.66:101,0,34
chr10	15275191	.	C	CGT	454.13	PASS	AB=0.916;AC=12;AF=0.214;AN=56;BaseQRankSum=1.383;DP=509;FS=1.646;HRun=0;HaplotypeScore=103.1749;InbreedingCoeff=-0.0906;MQ=52.13;MQ0=13;MQRankSum=0.486;QD=1.91;ReadPosRankSum=0.550;VQSLOD=1.5557;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,8:26:14.95:0,15,121	0/0:12,0:12:8.48:0,8,56	0/0:6,0:2:2.97:0,3,20	0/1:14,0:4:6.61:7,0,58	0/0:17,0:17:11.85:0,12,159	0/0:17,1:17:25.22:0,25,259	0/1:30,0:28:0.18:0,0,206	0/1:13,0:13:10.80:11,0,113	0/0:16,0:14:15.56:0,16,69	0/0:14,0:14:1.19:0,1,39	0/0:8,0:9:2.27:0,2,20	0/1:21,0:21:0.75:1,0,109	0/1:11,1:11:21.50:22,0,48	0/0:16,0:16:7.54:0,8,52	1/1:15,3:17:16.62:216,17,0	0/1:9,8:17:37.97:77,0,38	0/0:36,0:35:43.65:0,44,224	0/1:17,3:20:45.88:202,0,46	0/0:13,0:13:17.63:0,18,131	0/0:8,0:8:2.43:0,2,35	0/1:50,1:50:3.69:4,0,428	0/0:11,0:11:21.05:0,21,264	0/1:13,0:13:27.63:28,0,111	0/1:17,10:29:24.74:25,0,181	0/0:13,4:17:6.40:0,6,151	0/0:24,0:23:15.02:0,15,118	0/0:16,0:15:18.11:0,18,73	0/0:10,0:8:13.74:0,14,69
chr10	15275193	.	TGC	T	3883.62	PASS	AB=0.917;AC=30;AF=0.536;AN=56;BaseQRankSum=-4.201;DP=524;FS=1.003;HRun=0;HaplotypeScore=89.9377;InbreedingCoeff=0.0798;MQ=52.04;MQ0=14;MQRankSum=1.280;QD=9.01;ReadPosRankSum=-0.337;VQSLOD=3.0910;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:29,1:28:5.09:5,0,87	1/1:2,10:12:11.44:141,11,0	0/0:8,0:2:2.97:0,3,20	0/1:14,1:4:0.26:0,0,18	0/0:17,0:17:11.83:0,12,87	0/0:18,0:17:24.71:0,25,270	0/1:29,0:27:0.16:0,0,127	0/1:5,9:13:41.48:172,0,41	1/1:2,15:15:17.89:241,18,0	1/1:4,11:15:35.98:394,36,0	1/1:7,2:9:17.86:186,18,0	0/0:21,0:21:14.80:0,15,97	0/1:12,0:11:3.10:3,0,40	0/1:16,1:17:34.04:34,0,36	1/1:18,0:17:5.85:224,6,0	0/1:16,1:17:13.75:149,0,14	0/1:3,34:36:8.25:715,0,8	0/1:19,0:19:25.46:205,0,25	0/1:12,0:12:26.97:36,0,27	0/1:9,0:9:17.27:102,0,17	0/1:53,1:53:99:290,0,326	0/0:13,0:13:26.84:0,27,309	0/1:13,0:13:2.78:3,0,108	0/1:27,2:29:42.69:43,0,171	0/0:16,0:16:17.87:0,18,164	1/1:8,18:25:12.06:396,12,0	1/1:0,15:14:21.07:316,21,0	1/1:8,4:10:7.67:228,8,0
chr10	15277706	.	GT	G	1177.25	PASS	AB=1.000;AC=24;AF=0.429;AN=56;BaseQRankSum=6.136;DP=452;FS=9.468;HRun=12;HaplotypeScore=55.9557;InbreedingCoeff=0.8093;MQ=60.66;MQ0=6;MQRankSum=1.548;QD=7.05;ReadPosRankSum=2.313;VQSLOD=1.3673;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,22:28:35.84:279,36,0	0/0:13,0:13:30.92:0,31,297	0/1:20,0:11:8.25:8,0,29	0/0:16,0:9:2.71:0,3,14	0/0:20,0:20:39.42:0,39,369	0/0:20,0:20:17.69:0,18,122	0/1:7,0:6:4.54:5,0,57	0/0:16,0:16:34.17:0,34,315	0/0:13,0:13:29.54:0,30,255	0/0:19,0:19:39.07:0,39,390	0/0:24,0:24:54.08:0,54,533	1/1:4,11:15:17.89:139,18,0	1/1:1,10:11:20.92:162,21,0	1/1:1,5:6:11.95:93,12,0	0/0:14,0:14:9.84:0,10,281	0/0:11,0:11:20.94:0,21,184	0/0:27,0:27:60.11:0,60,599	0/0:29,1:29:39.63:0,40,535	1/1:8,0:12:16.87:55,17,0	1/1:10,0:20:21.95:65,22,0	1/1:4,0:7:8.15:24,8,0	1/1:3,3:6:11.95:93,12,0	1/1:1,16:18:34.67:260,35,0	1/1:0,2:2:5.98:46,6,0	1/1:2,12:14:20.91:162,21,0	0/0:22,0:22:18.52:0,19,340	0/0:18,1:17:22.31:0,22,347	0/0:18,0:18:32.87:0,33,305
chr10	15278346	.	G	GGT	3420.26	PASS	AB=0.773;AC=25;AF=0.481;AN=52;BaseQRankSum=-6.573;DP=548;FS=0.000;HRun=0;HaplotypeScore=95.5076;InbreedingCoeff=0.1154;MQ=60.87;MQ0=16;MQRankSum=-1.133;QD=10.00;ReadPosRankSum=-2.460;VQSLOD=2.7495;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:16,11:28:61.80:199,0,62	0/0:4,0:10:11.36:0,11,56	./.	./.	0/1:18,4:21:67.26:114,0,67	0/1:10,11:21:8.10:293,0,8	0/1:10,0:9:24.06:60,0,24	0/1:11,0:16:8.41:9,0,8	0/0:8,0:16:4.91:0,5,80	0/0:11,0:29:31.73:0,32,157	0/0:10,0:26:28.41:0,28,140	1/1:8,5:13:15.05:225,15,0	0/1:8,5:13:14.99:207,0,15	0/1:9,7:14:15.01:207,0,15	1/1:13,2:22:30.02:299,30,0	1/1:4,0:11:15:130,15,0	0/0:15,0:23:17.04:0,17,84	1/1:16,0:27:15.88:133,16,0	0/1:17,7:23:39.05:267,0,39	0/1:20,7:27:68.81:259,0,69	1/1:9,2:11:6.13:91,6,0	0/1:6,10:16:45.01:204,0,45	1/1:9,8:18:12.04:180,12,0	1/1:10,12:22:27.04:380,27,0	0/1:12,7:18:48.09:162,0,48	0/0:9,0:20:22.73:0,23,112	0/0:8,0:16:19.89:0,20,98	0/0:2,0:2:5.68:0,6,28
chr10	15278538	.	CA	C	567.13	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.519;DP=529;FS=2.044;HRun=2;HaplotypeScore=63.8823;InbreedingCoeff=0.9940;MQ=74.28;MQ0=1;MQRankSum=-0.985;QD=28.36;ReadPosRankSum=1.908;VQSLOD=3.3536;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:42:99:0,120,1730	0/0:9,0:9:24.08:0,24,360	0/0:18,0:18:51.17:0,51,752	0/0:14,0:14:32.10:0,32,463	0/0:24,0:24:72.22:0,72,1040	0/0:27,0:27:81.27:0,81,1213	0/0:17,0:17:51.17:0,51,763	0/0:25,0:25:75.22:0,75,1053	0/0:24,0:24:72.24:0,72,1078	0/0:18,0:18:54.18:0,54,810	0/0:21,0:21:63.21:0,63,944	0/0:24,0:24:66.18:0,66,963	0/0:13,0:13:33.11:0,33,493	0/0:12,0:12:36.12:0,36,538	1/1:1,19:20:51.17:662,51,0	0/0:12,0:12:36.08:0,36,513	0/0:24,0:24:72.24:0,72,1073	0/0:18,0:18:54.18:0,54,803	0/0:27,0:27:75.24:0,75,1104	0/0:14,0:14:42.12:0,42,590	0/0:19,0:19:57.19:0,57,854	0/0:9,0:9:27.06:0,27,379	0/0:10,0:10:27.09:0,27,402	0/0:26,0:26:72.19:0,72,1035	0/0:12,0:12:36.12:0,36,540	0/0:18,0:18:51.17:0,51,765	0/0:22,0:22:66.21:0,66,968	0/0:9,0:9:27.09:0,27,405
chr10	15278700	.	C	CA	3480.01	PASS	AB=0.968;AC=18;AF=0.321;AN=56;BaseQRankSum=-7.795;DP=580;FS=0.792;HRun=10;HaplotypeScore=64.6189;InbreedingCoeff=0.8342;MQ=69.92;MQ0=0;MQRankSum=-0.519;QD=17.67;ReadPosRankSum=2.400;VQSLOD=4.2749;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,29:35:56.39:789,56,0	0/0:6,0:6:16.77:0,17,123	0/0:20,0:17:22.75:0,23,132	0/1:16,0:12:0.29:0,0,11	0/0:31,0:32:73.93:0,74,597	0/0:20,0:21:61.96:0,62,498	0/0:24,0:24:56.91:0,57,468	0/0:28,1:29:33.44:0,33,463	0/0:25,0:25:71.85:0,72,584	0/0:19,0:19:44.90:0,45,366	0/0:24,0:24:62.33:0,62,513	1/1:3,17:20:8.52:295,9,0	1/1:1,12:13:30.08:320,30,0	1/1:1,16:17:36.09:384,36,0	0/0:24,0:24:56.91:0,57,468	0/0:20,0:20:58.91:0,59,467	0/0:23,1:24:36.87:0,37,504	0/0:17,0:17:38.93:0,39,320	0/1:27,1:28:52.54:53,0,146	0/0:17,2:19:11.26:0,11,169	0/0:20,0:20:29.84:0,30,213	1/1:4,11:15:5.43:263,5,0	1/1:4,14:18:20.47:423,20,0	1/1:2,17:19:51.13:544,51,0	1/1:3,11:15:39.04:408,39,0	0/0:26,0:26:35.74:0,36,488	0/0:24,0:23:50.90:0,51,415	0/0:5,0:5:14.58:0,15,109
chr10	15279162	.	AT	A	5911.68	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=11.687;DP=635;FS=6.800;HRun=12;HaplotypeScore=71.3072;InbreedingCoeff=0.9889;MQ=70.83;MQ0=0;MQRankSum=-0.524;QD=17.49;ReadPosRankSum=4.249;VQSLOD=5.8996;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,41:46:99:842,110,0	0/0:12,0:12:21.01:0,21,204	0/0:18,0:17:27.03:0,27,264	0/0:12,0:12:8.49:0,8,122	0/0:25,2:27:25.66:0,26,617	0/0:21,0:23:62.75:0,63,586	0/0:19,0:20:32.31:0,32,407	0/0:22,0:22:51.09:0,51,508	0/0:15,1:16:21.88:0,22,396	0/0:21,0:21:33.06:0,33,493	0/0:14,0:15:35.91:0,36,349	1/1:4,12:16:23.90:186,24,0	1/1:1,16:18:37.90:284,38,0	1/1:3,16:20:46.84:354,47,0	1/1:4,15:19:44.81:348,45,0	1/1:3,30:33:86.67:673,87,0	0/0:29,0:29:62.87:0,63,591	1/1:1,17:18:47.82:371,48,0	1/1:5,22:29:69.75:514,70,0	1/1:1,18:20:22.38:347,22,0	1/1:4,17:21:40.89:362,41,0	1/1:4,20:24:47.11:449,47,0	1/1:3,20:23:44.56:340,45,0	1/1:4,22:27:58.81:447,59,0	1/1:3,21:24:50.75:395,51,0	0/0:37,1:38:75.94:0,76,942	0/0:28,2:31:48.69:0,49,644	0/0:13,0:13:33.07:0,33,335
chr10	15280932	.	GCCTTCCCCACCT	G	5553.96	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=11.771;DP=774;FS=0.519;HRun=0;HaplotypeScore=262.2587;InbreedingCoeff=0.9992;MQ=84.95;MQ0=0;MQRankSum=-12.133;QD=70.30;ReadPosRankSum=0.205;VQSLOD=4.0097;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,117,6845	0/0:11,0:11:33.11:0,33,1939	0/0:25,0:25:75.24:0,75,3742	0/0:29,0:29:79.20:0,79,4277	1/1:5,16:21:38.70:1188,39,0	1/1:4,23:27:63.22:2393,63,0	1/1:10,21:31:57.06:1974,57,0	0/0:22,0:22:66.22:0,66,3618	0/0:29,0:29:87.30:0,87,4958	0/0:26,0:26:78.27:0,78,4164	0/0:9,0:9:24.55:0,25,1441	0/0:34,0:34:99:0,99,5408	0/0:23,0:23:69.24:0,69,3848	0/0:38,0:38:99:0,105,5938	0/0:47,0:47:99:0,135,7875	0/0:31,0:31:90.31:0,90,5440	0/0:28,0:28:84.27:0,84,4849	0/0:36,0:36:99:0,108,6420	0/0:19,0:19:57.18:0,57,3051	0/0:20,0:20:60.21:0,60,3683	0/0:45,0:45:99:0,123,6974	0/0:30,0:30:90.31:0,90,5410	0/0:23,0:23:63.22:0,63,3687	0/0:37,0:37:99:0,111,6741	0/0:18,0:18:51.18:0,51,2905	0/0:30,0:30:90.30:0,90,5263	0/0:32,0:32:93.32:0,93,5464	0/0:13,0:13:39.13:0,39,2317
chr10	15281573	.	AAACT	A	2351.25	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=10.081;DP=635;FS=1.153;HRun=0;HaplotypeScore=100.8246;InbreedingCoeff=0.9967;MQ=68.45;MQ0=0;MQRankSum=-1.180;QD=35.09;ReadPosRankSum=2.661;VQSLOD=3.6799;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,99,2534	0/0:11,0:11:33.10:0,33,834	0/0:18,0:17:25.60:0,26,675	0/0:10,0:10:18.95:0,19,427	1/1:2,22:24:56.96:961,57,0	1/1:1,18:19:38.66:738,39,0	1/1:2,22:24:42.14:795,42,0	0/0:37,0:37:99:0,99,2453	0/0:20,0:20:60.15:0,60,1514	0/0:25,0:25:75.19:0,75,1777	0/0:19,0:19:57.17:0,57,1406	0/0:16,0:16:48.15:0,48,1238	0/0:12,0:12:33.11:0,33,807	0/0:17,0:17:42.13:0,42,1041	0/0:17,0:17:48.15:0,48,1168	0/0:19,0:19:54.19:0,54,1344	0/0:38,0:38:99:0,105,2663	0/0:19,0:19:54.16:0,54,1396	0/0:36,0:36:99:0,105,2584	0/0:27,0:27:81.25:0,81,2035	0/0:39,0:39:99:0,111,2658	0/0:20,0:20:60.06:0,60,1381	0/0:22,0:22:63.13:0,63,1607	0/0:21,0:21:63.22:0,63,1580	0/0:12,0:12:30.06:0,30,725	0/0:25,0:25:72.25:0,72,1940	0/0:36,0:36:99:0,102,2305	0/0:16,0:16:48:0,48,971
chr10	15282447	.	CAA	C	1824.81	PASS	AB=0.964;AC=17;AF=0.304;AN=56;BaseQRankSum=1.525;DP=491;FS=32.136;HRun=13;HaplotypeScore=91.8698;InbreedingCoeff=0.9027;MQ=79.28;MQ0=8;MQRankSum=2.171;QD=11.48;ReadPosRankSum=4.592;VQSLOD=0.1451;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,17:18:41.78:384,42,0	0/0:8,0:9:23.40:0,23,287	0/0:42,0:19:25.74:0,26,228	0/1:49,1:28:10.08:10,0,149	0/0:19,0:19:19.41:0,19,576	0/0:14,0:15:30.07:0,30,389	0/0:14,0:14:39.13:0,39,557	0/0:18,0:20:38.08:0,38,460	0/0:9,0:10:14.99:0,15,174	0/0:15,0:15:36.06:0,36,463	0/0:10,0:10:26.67:0,27,297	1/1:6,9:15:20.97:204,21,0	1/1:2,8:10:24.03:233,24,0	1/1:3,5:8:8.98:83,9,0	0/0:19,0:19:39.08:0,39,520	0/0:10,0:9:18.02:0,18,228	0/0:20,0:20:60.01:0,60,746	0/0:18,0:19:48.16:0,48,669	0/0:15,0:23:50.45:0,50,481	0/0:10,0:17:27:0,27,259	0/0:9,0:11:14.98:0,15,148	1/1:1,7:8:21.03:204,21,0	1/1:2,12:15:35.76:332,36,0	1/1:3,11:15:27.01:261,27,0	1/1:3,13:16:33.04:320,33,0	0/0:19,0:21:44.47:0,44,497	0/0:19,0:19:54.05:0,54,685	0/0:16,0:18:35.96:0,36,399
chr10	15282473	.	ATT	A	651.30	PASS	AB=0.935;AC=14;AF=0.250;AN=56;BaseQRankSum=-0.317;DP=549;FS=2.805;HRun=17;HaplotypeScore=118.9062;InbreedingCoeff=0.6937;MQ=65.27;MQ0=11;MQRankSum=-2.716;QD=4.15;ReadPosRankSum=1.855;VQSLOD=-0.1348;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:22:32.02:0,32,324	0/0:3,0:3:6:0,6,54	0/1:69,1:21:14.84:15,0,58	0/0:76,1:29:14.55:0,15,139	0/0:11,1:16:7.29:0,7,191	0/0:16,0:22:44.09:0,44,456	0/0:14,0:17:34.15:0,34,345	0/0:27,0:28:48.41:0,48,407	0/0:10,0:10:18.95:0,19,168	0/0:14,0:18:29.55:0,30,271	0/0:5,0:10:22.18:0,22,179	0/0:11,0:12:9.10:0,9,224	0/0:15,0:15:20.52:0,21,337	0/1:9,0:10:6.16:6,0,91	1/1:4,3:7:11.86:90,12,0	1/1:2,6:8:14.64:107,15,0	0/0:21,0:24:35.39:0,35,277	1/1:7,6:15:0.88:129,1,0	1/1:15,8:24:29.43:240,29,0	1/1:9,4:12:20.76:158,21,0	1/1:1,3:5:11.72:83,12,0	0/0:11,0:13:34.69:0,35,339	0/0:13,0:16:4.48:0,4,132	0/0:15,0:16:20.43:0,20,237	0/0:18,0:19:37.65:0,38,377	0/0:11,0:18:44.29:0,44,411	0/0:14,0:16:24.90:0,25,237	0/0:15,0:15:17.54:0,18,189
chr10	15282488	.	TTTG	T	549.54	PASS	AB=0.982;AC=16;AF=0.286;AN=56;BaseQRankSum=0.829;DP=488;FS=20.759;HRun=0;HaplotypeScore=123.3982;InbreedingCoeff=-0.2521;MQ=56.25;MQ0=7;MQRankSum=-6.057;QD=1.93;ReadPosRankSum=-0.351;VQSLOD=0.8868;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:51.39:0,51,537	0/0:2,0:2:5.96:0,6,42	0/1:46,0:9:11.48:11,0,60	0/1:60,0:18:23.72:24,0,196	0/0:20,0:20:32.82:0,33,430	0/0:26,0:26:59.80:0,60,797	0/0:15,0:15:39.59:0,40,503	0/1:25,0:25:36.01:36,0,260	0/1:9,0:9:10.64:11,0,126	0/1:16,0:16:56.83:57,0,153	0/1:16,0:15:79.68:80,0,118	0/0:12,0:12:22.56:0,23,311	0/0:15,0:15:40.99:0,41,388	0/0:11,0:11:1.64:0,2,133	0/1:7,0:7:37.86:62,0,38	0/1:8,0:7:9.81:10,0,12	0/1:19,0:19:43.67:44,0,165	0/1:15,0:15:7.99:8,0,90	0/1:19,2:20:20.86:151,0,21	0/1:12,3:13:41.41:112,0,41	1/1:4,0:4:9.17:34,9,0	0/0:14,0:14:30.54:0,31,456	0/0:14,0:14:17.83:0,18,260	0/0:15,0:15:32.61:0,33,434	0/0:22,0:21:59.64:0,60,594	0/0:18,0:17:4.98:0,5,287	0/1:11,0:11:21.79:22,0,176	0/1:11,0:11:47.88:48,0,153
chr10	15284109	.	A	AAAACC	20800.75	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-0.043;DP=594;FS=13.407;HRun=0;HaplotypeScore=115.9259;InbreedingCoeff=0.9865;MQ=58.56;MQ0=2;MQRankSum=-8.634;QD=64.80;ReadPosRankSum=-0.680;VQSLOD=5.1864;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:84.29:0,84,1744	1/1:2,1:3:9.03:221,9,0	0/0:28,0:11:13.69:0,14,251	0/0:26,0:11:16.36:0,16,337	1/1:41,1:42:99:2703,114,0	1/1:18,1:19:51.17:1303,51,0	1/1:15,0:15:45.15:964,45,0	1/1:14,22:40:99:2753,105,0	1/1:1,12:15:27.09:819,27,0	1/1:5,26:32:84.26:2263,84,0	1/1:3,18:22:57.14:1588,57,0	0/0:18,0:18:48.16:0,48,965	0/0:13,0:13:39.08:0,39,607	0/0:17,0:17:51.18:0,51,1068	0/0:22,0:22:63.18:0,63,1161	0/0:13,0:13:36.07:0,36,687	1/1:3,15:18:26.01:995,26,0	0/0:20,0:20:48.74:0,49,1109	1/1:17,1:17:39.27:1089,39,0	1/1:33,0:33:84.23:2010,84,0	1/1:8,1:9:21.07:551,21,0	0/0:14,0:14:39.11:0,39,735	0/0:20,0:20:57.16:0,57,1107	0/0:27,0:27:78.27:0,78,1588	0/0:25,0:25:75.24:0,75,1533	1/1:6,16:22:51.16:1421,51,0	1/1:3,13:15:39.13:1204,39,0	1/1:3,12:17:30.10:917,30,0
chr10	15284113	.	C	CCAA	9074.56	PASS	AB=0.982;AC=23;AF=0.411;AN=56;BaseQRankSum=16.042;DP=571;FS=8.365;HRun=0;HaplotypeScore=120.8078;InbreedingCoeff=0.4818;MQ=60.20;MQ0=2;MQRankSum=-9.081;QD=30.45;ReadPosRankSum=4.323;VQSLOD=5.1188;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:90.31:0,90,1658	0/1:2,0:2:18.96:26,0,19	0/0:28,0:11:23.98:0,24,327	0/0:24,0:11:23.90:0,24,386	1/1:3,34:43:77.21:2122,77,0	1/1:2,16:19:39.64:1022,40,0	1/1:0,10:14:42.14:805,42,0	0/1:31,0:32:99:574,0,271	0/1:15,0:15:13.56:285,0,14	0/1:26,0:27:96.47:641,0,96	0/1:20,0:20:31.82:442,0,32	0/0:18,0:18:51.16:0,51,897	0/0:13,0:13:39.13:0,39,727	0/0:17,0:17:51.17:0,51,948	0/0:21,0:22:66.21:0,66,1178	0/0:11,0:12:36.12:0,36,621	1/1:16,0:17:1.10:346,1,0	0/0:19,0:19:54.19:0,54,1003	1/1:1,0:19:28.60:485,29,0	1/1:0,0:34:58.57:1005,59,0	1/1:1,0:7:18.06:253,18,0	0/0:13,0:14:42.13:0,42,733	0/0:21,0:21:63.17:0,63,1071	0/0:25,0:27:78.27:0,78,1400	0/0:25,0:25:75.26:0,75,1392	0/1:18,0:18:69.87:462,0,70	0/1:15,0:16:1.94:380,0,2	1/1:14,0:14:21.05:225,21,0
chr10	15284547	.	TG	T	2337.99	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.566;DP=599;FS=0.492;HRun=1;HaplotypeScore=56.0556;InbreedingCoeff=0.9964;MQ=66.99;MQ0=1;MQRankSum=0.544;QD=35.42;ReadPosRankSum=0.170;VQSLOD=3.4641;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:42:99:0,126,1986	0/0:12,0:12:36.12:0,36,575	0/0:8,0:8:19.86:0,20,240	0/0:9,0:8:20.59:0,21,247	0/0:21,0:21:63.20:0,63,980	0/0:18,0:18:54.18:0,54,861	0/0:25,0:25:75.22:0,75,1146	0/0:36,0:36:99:0,105,1605	0/0:17,0:17:51.14:0,51,764	0/0:27,0:27:81.27:0,81,1274	0/0:21,0:21:63.21:0,63,1006	0/0:21,0:21:63.18:0,63,953	0/0:20,0:20:57.18:0,57,886	0/0:23,0:23:69.20:0,69,1053	0/0:26,0:26:78.27:0,78,1233	0/0:17,0:17:51.14:0,51,765	0/0:20,0:20:60.16:0,60,930	0/0:19,0:19:54.18:0,54,852	1/1:0,25:25:69.18:926,69,0	1/1:1,23:24:69.18:926,69,0	1/1:0,17:17:45.15:629,45,0	0/0:31,0:31:93.32:0,93,1484	0/0:15,0:15:45.15:0,45,715	0/0:16,0:16:45.14:0,45,696	0/0:25,0:25:69.22:0,69,1075	0/0:24,0:24:72.23:0,72,1108	0/0:22,0:22:66.21:0,66,1026	0/0:17,0:17:48.16:0,48,766
chr10	15285978	.	T	TC	3551.37	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-12.188;DP=679;FS=0.000;HRun=6;HaplotypeScore=107.2892;InbreedingCoeff=0.9986;MQ=90.77;MQ0=3;MQRankSum=1.651;QD=30.10;ReadPosRankSum=2.213;VQSLOD=3.3324;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:42.09:0,42,428	0/0:14,0:14:39.07:0,39,387	0/0:68,0:47:99:0,103,911	0/0:59,0:42:39.98:0,40,530	1/1:3,30:33:81.12:976,81,0	1/1:2,23:25:60.19:757,60,0	1/1:2,18:20:36.12:454,36,0	0/0:28,0:28:72.10:0,72,694	0/0:23,0:23:69.07:0,69,673	0/0:36,0:36:99:0,99,987	0/0:27,0:27:75.14:0,75,752	0/0:24,0:24:69.15:0,69,702	0/0:27,0:27:78.08:0,78,757	0/0:8,0:8:24.03:0,24,233	0/0:26,0:26:75.12:0,75,744	0/0:25,0:25:66.12:0,66,660	0/0:28,0:28:78.15:0,78,787	0/0:26,0:26:75.09:0,75,738	1/1:1,14:15:42.12:514,42,0	1/1:1,16:17:47.99:547,48,0	1/1:0,8:8:24.08:303,24,0	0/0:15,0:15:36.93:0,37,352	0/0:13,0:13:36.06:0,36,359	0/0:11,0:11:33.06:0,33,330	0/0:20,0:20:51.10:0,51,515	0/0:29,0:29:84.15:0,84,836	0/0:28,0:27:81.10:0,81,791	0/0:8,0:8:24.03:0,24,233
chr10	15287462	.	T	TAA	3935.16	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=-6.638;DP=481;FS=11.102;HRun=13;HaplotypeScore=69.6681;InbreedingCoeff=0.8995;MQ=65.73;MQ0=4;MQRankSum=-2.703;QD=20.28;ReadPosRankSum=-4.275;VQSLOD=0.7099;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:27:50.44:0,50,418	1/1:2,5:8:21.06:260,21,0	0/1:12,0:8:6.92:7,0,29	0/0:13,0:8:11.15:0,11,86	0/0:20,0:22:42.33:0,42,351	0/0:18,0:18:38.95:0,39,339	0/0:14,0:15:35.85:0,36,311	1/1:16,18:37:62.11:704,62,0	1/1:5,8:13:33.07:400,33,0	1/1:4,12:20:44:455,44,0	1/1:4,9:14:23.98:268,24,0	0/0:11,0:13:14.49:0,14,220	0/0:14,0:14:6.23:0,6,237	0/0:10,0:11:17.63:0,18,139	0/0:3,0:16:35.92:0,36,168	0/0:5,0:14:16.38:0,16,70	1/1:2,19:22:44.36:577,44,0	0/0:5,0:21:38.35:0,38,165	0/0:13,0:16:17.07:0,17,114	0/0:24,0:26:54.48:0,54,461	0/0:9,0:9:14.86:0,15,128	0/0:9,0:9:16.95:0,17,138	0/0:13,0:14:23.74:0,24,247	0/0:9,0:11:23.48:0,23,182	0/0:18,0:18:38.84:0,39,339	1/1:8,19:29:58.60:697,59,0	1/1:7,12:21:23.51:273,24,0	1/1:1,13:15:23.57:294,24,0
chr10	15287888	.	GAC	G	2285.88	PASS	AB=0.795;AC=15;AF=0.278;AN=54;BaseQRankSum=-1.889;DP=528;FS=1.682;HRun=0;HaplotypeScore=145.0954;InbreedingCoeff=-0.2033;MQ=46.91;MQ0=46;MQRankSum=6.419;QD=8.53;ReadPosRankSum=4.101;VQSLOD=3.6286;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:11,30:32:96.23:494,0,96	0/1:8,0:7:55.02:55,0,68	0/0:17,0:7:17.09:0,17,233	0/0:15,0:12:19.81:0,20,339	./.	0/0:17,0:16:18.03:0,18,247	0/0:13,0:11:15.50:0,16,190	0/0:41,0:34:30.42:0,30,706	0/1:14,0:14:6.72:28,0,7	0/0:22,0:19:3.96:0,4,319	0/1:19,1:20:14.01:14,0,153	0/1:7,4:9:60.70:61,0,133	0/1:7,15:20:99:263,0,135	0/1:11,7:14:52.25:259,0,52	0/0:17,0:17:8.98:0,9,106	0/0:28,0:28:23.25:0,23,227	0/1:25,0:24:0.47:0,0,238	0/0:14,0:14:26.33:0,26,266	0/0:13,0:11:22.45:0,22,181	0/0:15,0:13:5.95:0,6,63	0/0:29,0:23:26.99:0,27,316	0/1:7,9:13:99:213,0,102	1/1:10,9:13:15.05:206,15,0	0/1:14,21:29:93.51:472,0,94	0/1:3,8:10:17.34:256,0,17	0/1:17,0:17:25.40:25,0,272	0/0:11,0:11:1.50:0,2,138	0/1:10,1:9:74.30:93,0,74
chr10	15287890	.	CACAGACAGACAGACAG	C	1026.67	PASS	AB=0.991;AC=15;AF=0.278;AN=54;BaseQRankSum=-0.716;DP=516;FS=7.668;HRun=0;HaplotypeScore=228.4354;InbreedingCoeff=0.3782;MQ=45.25;MQ0=47;MQRankSum=-2.805;QD=5.43;ReadPosRankSum=0.917;VQSLOD=1.2421;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:31:51.51:0,52,1062	0/0:6,0:7:12.02:0,12,320	0/0:16,0:6:14.83:0,15,201	0/1:14,0:12:10.83:11,0,191	./.	1/1:17,0:16:6.02:153,6,0	1/1:13,0:11:11.99:204,12,0	0/0:38,0:31:13.74:0,14,755	0/1:13,0:13:1.45:1,0,264	0/1:22,0:19:1.13:1,0,743	0/1:19,0:19:6.82:7,0,425	0/0:12,0:10:24.08:0,24,655	0/0:22,0:20:41.94:0,42,924	0/0:14,0:13:23.81:0,24,540	0/0:16,0:16:8.48:0,8,70	0/1:25,0:25:42.28:55,0,42	0/0:24,0:24:23.78:0,24,886	0/1:14,0:14:1.94:2,0,31	1/1:12,0:10:24.04:385,24,0	0/0:6,10:14:0.89:0,1,1	1/1:28,0:22:15.04:359,15,0	0/0:16,0:14:27.09:0,27,755	0/0:18,0:13:18.06:0,18,279	0/0:33,0:28:54.59:0,55,1133	0/0:11,0:10:20.94:0,21,364	0/0:17,0:17:1.20:0,1,360	0/0:10,0:10:7.22:0,7,444	0/1:11,0:9:2.58:3,0,683
chr10	15287894	.	G	GAC	1273.87	PASS	AB=0.987;AC=17;AF=0.304;AN=56;BaseQRankSum=-0.232;DP=510;FS=4.501;HRun=0;HaplotypeScore=149.0501;InbreedingCoeff=-0.1072;MQ=44.74;MQ0=47;MQRankSum=-6.770;QD=4.94;ReadPosRankSum=-1.081;VQSLOD=2.4461;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,1:31:24.20:0,24,485	0/1:9,0:8:13.80:14,0,16	0/0:12,0:6:15.05:0,15,212	0/0:10,0:11:24.88:0,25,280	0/0:10,0:10:0:0,0,0	0/0:17,0:16:15.02:0,15,167	0/0:13,0:11:1.45:0,1,91	0/1:38,0:31:99:364,0,107	0/1:13,0:13:29.25:29,0,57	0/1:21,0:18:99:203,0,135	0/1:18,0:18:69.18:69,0,116	0/1:11,0:9:30.98:31,0,143	0/0:22,0:20:11.07:0,11,288	0/0:17,0:12:29.77:0,30,278	1/1:11,5:16:8.46:80,8,0	1/1:15,10:25:14.04:169,14,0	0/1:22,1:22:13.17:13,0,206	0/1:12,2:14:4.19:99,0,4	0/1:12,0:10:25.23:25,0,112	0/0:15,0:13:2.99:0,3,25	0/0:29,0:23:21.07:0,21,298	0/0:18,0:15:32.87:0,33,300	0/1:17,0:11:5.43:5,0,145	0/0:35,0:28:30.15:0,30,448	0/0:12,0:10:23.88:0,24,234	0/1:19,0:18:74.93:238,0,75	0/1:10,0:10:48.91:66,0,49	0/1:12,0:10:29.24:29,0,173
chr10	15287896	.	CAG	C	1199.66	PASS	AB=0.791;AC=17;AF=0.304;AN=56;BaseQRankSum=0.577;DP=498;FS=1.294;HRun=0;HaplotypeScore=147.2892;InbreedingCoeff=0.0077;MQ=44.44;MQ0=48;MQRankSum=-6.407;QD=5.02;ReadPosRankSum=-1.495;VQSLOD=2.6948;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:31:53.07:0,53,472	0/1:7,2:8:4.44:4,0,67	0/0:8,0:6:17.09:0,17,218	0/0:10,0:10:24.17:0,24,275	0/0:10,0:10:0:0,0,0	0/0:13,3:15:14.95:0,15,143	0/1:11,2:11:22.93:23,0,73	0/1:16,22:31:99:327,0,246	0/1:6,7:13:29.25:29,0,80	0/1:16,4:17:99:202,0,274	0/1:12,6:18:69.06:69,0,164	0/0:11,0:9:22.65:0,23,296	0/0:20,0:18:40.51:0,41,401	0/0:17,0:12:29.71:0,30,344	1/1:6,10:16:8.51:72,9,0	1/1:13,11:24:4.53:143,5,0	0/1:20,3:22:10.26:10,0,343	1/1:11,3:14:12.61:109,13,0	0/1:11,1:10:53.39:53,0,93	0/0:14,1:13:3:0,3,25	0/0:26,2:22:4.82:0,5,186	0/0:18,0:15:32.81:0,33,411	0/0:16,0:10:17.89:0,18,151	0/0:34,1:28:53.16:0,53,483	0/0:12,0:10:23.88:0,24,229	0/1:9,9:17:83.70:222,0,84	0/1:6,3:9:68.51:69,0,95	0/1:11,1:10:29.28:29,0,320
chr10	15287900	.	CAGACAGACAGACAGACAG	C	870.36	PASS	AB=0.988;AC=18;AF=0.321;AN=56;BaseQRankSum=0.986;DP=489;FS=3.222;HRun=0;HaplotypeScore=227.6927;InbreedingCoeff=0.2077;MQ=39.57;MQ0=50;MQRankSum=-3.703;QD=3.60;ReadPosRankSum=-2.662;VQSLOD=2.4566;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:31:54.52:0,55,1514	0/0:9,0:8:15.02:0,15,366	0/0:7,0:6:18.06:0,18,351	0/0:7,0:7:16.77:0,17,347	1/1:0,8:10:0.47:1,0,0	1/1:15,0:15:14.99:265,15,0	1/1:11,0:10:15.05:310,15,0	0/1:37,0:30:1.53:2,0,1043	0/1:13,0:13:10.42:10,0,301	0/1:18,0:15:6.32:6,0,905	0/1:18,0:17:3.22:3,0,478	0/0:11,0:9:24.08:0,24,866	0/0:20,0:18:42.22:0,42,1234	0/0:15,0:10:26.96:0,27,729	0/0:16,0:16:5.87:0,6,85	0/1:22,0:23:39.68:50,0,40	0/0:22,0:20:25.37:0,25,1076	0/1:14,0:14:3.40:3,0,138	1/1:11,0:9:18.31:160,18,0	0/0:14,0:12:0.89:0,1,2	0/1:29,0:23:19.25:182,0,19	0/0:17,0:14:30.10:0,30,1045	0/0:15,0:9:18.06:0,18,451	0/0:37,0:29:57.47:0,57,1547	0/0:13,0:10:23.95:0,24,538	0/1:17,0:16:26.14:26,0,365	0/1:11,0:12:5.10:5,0,476	0/1:12,0:10:3.78:4,0,916
chr10	15287904	.	CAG	C	321.49	PASS	AB=0.852;AC=17;AF=0.304;AN=56;BaseQRankSum=4.474;DP=473;FS=4.501;HRun=0;HaplotypeScore=145.5167;InbreedingCoeff=0.4022;MQ=39.37;MQ0=46;MQRankSum=-4.056;QD=1.51;ReadPosRankSum=-2.942;VQSLOD=1.6346;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:31:50.82:0,51,528	0/0:8,2:9:12.51:0,13,180	0/0:6,0:6:15.05:0,15,209	0/0:6,0:6:15.05:0,15,196	0/0:10,0:10:0:0,0,0	1/1:10,3:12:3.46:25,3,0	1/1:11,2:11:12.20:77,12,0	0/1:24,10:27:0.18:0,0,509	0/0:8,6:14:0.16:0,0,108	0/1:15,2:13:15.26:15,0,461	0/1:12,5:15:6.76:7,0,214	0/0:9,0:9:23.30:0,23,321	0/0:19,0:18:41.65:0,42,492	0/0:15,0:9:23.78:0,24,292	0/1:14,1:15:2.26:21,0,2	1/1:20,2:22:2.27:28,2,0	0/0:20,3:21:24.39:0,24,457	0/1:14,2:16:13.33:13,0,117	1/1:1,1:8:15.15:126,15,0	0/1:13,1:12:0:0,0,1	1/1:25,2:21:17.98:160,18,0	0/0:19,0:15:33.04:0,33,469	0/0:14,0:9:17.99:0,18,188	0/0:37,0:29:53.98:0,54,649	0/0:13,0:10:20.88:0,21,214	0/1:11,5:15:8.66:9,0,281	0/0:10,2:12:7.32:0,7,139	0/0:11,1:10:5.93:0,6,428
chr10	15287908	.	CAG	C	607.62	PASS	AB=0.968;AC=17;AF=0.304;AN=56;BaseQRankSum=6.027;DP=454;FS=0.715;HRun=0;HaplotypeScore=137.4492;InbreedingCoeff=0.1799;MQ=39.12;MQ0=44;MQRankSum=-3.919;QD=2.89;ReadPosRankSum=-1.261;VQSLOD=1.9983;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:29:47.78:0,48,487	0/1:10,0:9:6.02:6,0,132	0/0:3,0:3:8.97:0,9,88	0/0:4,0:4:12.01:0,12,136	0/0:8,2:10:0:0,0,0	1/1:12,1:12:3.46:25,3,0	1/1:10,3:11:10.74:79,11,0	0/1:28,0:21:39.58:40,0,559	0/1:13,0:13:26.18:26,0,106	0/1:17,0:13:34.01:34,0,457	0/0:16,0:14:12.04:0,12,231	0/0:10,0:9:23.30:0,23,321	0/0:18,0:18:38.86:0,39,460	0/0:13,0:7:17.89:0,18,235	0/1:15,0:15:0.73:63,0,1	1/1:20,2:22:1.28:131,1,0	0/0:25,0:23:27.31:0,27,471	0/1:9,6:15:76.26:76,0,100	0/1:10,0:9:9.27:58,0,9	0/0:15,0:13:3.01:0,3,43	1/1:27,0:20:17.92:139,18,0	0/0:19,0:15:32.93:0,33,460	0/0:14,0:9:17.72:0,18,137	0/0:37,0:29:56.82:0,57,623	0/0:11,0:8:17.87:0,18,171	0/1:15,0:14:62.04:62,0,322	0/1:12,0:12:32.20:32,0,102	0/0:11,0:9:12.05:0,12,444
chr10	15287912	.	CAG	C	40.65	PASS	AB=0.945;AC=7;AF=0.125;AN=56;BaseQRankSum=5.684;DP=454;FS=4.532;HRun=0;HaplotypeScore=138.5473;InbreedingCoeff=0.0906;MQ=39.22;MQ0=46;MQRankSum=-4.395;QD=0.43;ReadPosRankSum=0.122;VQSLOD=1.8500;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:32:50.07:0,50,366	0/0:8,2:9:5.61:0,6,38	0/0:3,0:3:5.97:0,6,61	0/0:2,0:2:5.75:0,6,55	0/0:10,0:10:0:0,0,0	1/1:14,0:13:2.12:23,2,0	0/1:11,0:9:7.88:21,0,8	0/0:23,6:21:30.62:0,31,539	0/0:10,4:13:5.39:0,5,99	0/0:14,2:12:2.03:0,2,365	0/0:13,5:15:15.02:0,15,219	0/0:10,0:9:23.21:0,23,228	0/0:17,0:17:37.76:0,38,280	0/0:11,0:6:14.93:0,15,153	0/0:15,0:15:6.50:0,6,29	0/0:24,0:24:8.25:0,8,115	0/0:21,3:22:27.24:0,27,398	0/1:13,2:15:7.27:8,0,7	0/1:11,0:10:21.81:22,0,36	0/0:16,0:14:3.01:0,3,43	0/1:27,0:20:40.47:78,0,40	0/0:19,0:15:29.79:0,30,313	0/0:12,0:7:11.71:0,12,69	0/0:37,0:29:52.96:0,53,383	0/0:11,0:8:17.85:0,18,142	0/1:13,3:15:0.53:1,0,222	0/0:9,2:11:0.05:0,0,111	0/0:10,1:9:21.96:0,22,387
chr10	15287914	.	GACAGAC	G	1050.11	PASS	AB=0.971;AC=20;AF=0.385;AN=52;BaseQRankSum=-0.911;DP=444;FS=10.417;HRun=0;HaplotypeScore=146.7192;InbreedingCoeff=-0.0302;MQ=39.33;MQ0=45;MQRankSum=4.247;QD=3.51;ReadPosRankSum=-0.689;VQSLOD=2.1183;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:40,0:32:35.91:173,0,36	0/0:11,0:10:2.59:0,3,19	./.	./.	0/0:11,0:11:2.60:0,3,10	1/1:11,3:13:6:57,6,0	0/1:10,2:10:0.70:101,0,1	0/0:26,0:18:20.36:0,20,139	0/0:12,0:11:0:0,0,1	0/0:15,0:11:4.07:0,4,115	0/1:18,0:15:23.45:23,0,67	0/1:11,0:10:40.87:54,0,41	0/1:15,2:17:11.16:125,0,11	0/1:10,0:6:4.23:39,0,4	0/0:14,0:14:7.46:0,7,40	0/1:23,0:23:2.89:3,0,66	0/1:26,0:23:12.22:12,0,253	0/0:13,0:14:11.86:0,12,59	1/1:11,0:10:4.58:33,5,0	0/0:16,0:14:3.01:0,3,43	0/1:25,0:18:71.72:72,0,91	0/1:17,0:14:20.09:56,0,20	0/1:11,0:6:1.71:28,0,2	1/1:37,0:29:3.61:238,4,0	1/1:11,0:8:7.80:120,8,0	0/1:14,0:14:11.50:64,0,12	0/0:11,0:11:11.58:0,12,69	0/0:11,0:9:18.07:0,18,179
chr10	15287918	.	GAC	G	1635.40	PASS	AB=0.902;AC=31;AF=0.596;AN=52;BaseQRankSum=-1.809;DP=444;FS=0.848;HRun=0;HaplotypeScore=138.2579;InbreedingCoeff=0.2214;MQ=39.69;MQ0=44;MQRankSum=1.043;QD=5.28;ReadPosRankSum=4.233;VQSLOD=3.0414;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:33,7:32:24.75:129,0,25	1/1:9,2:10:9.02:97,9,0	./.	./.	0/0:9,2:11:2.60:0,3,10	1/1:12,1:12:5.69:44,6,0	0/1:11,2:10:3.65:84,0,4	0/0:23,0:14:2.90:0,3,16	1/1:14,0:13:4.99:17,5,0	1/1:12,0:9:4.86:17,5,0	0/1:14,3:14:19.45:83,0,19	1/1:4,5:10:16.24:201,16,0	1/1:13,5:17:20.11:209,20,0	1/1:4,5:6:9.02:100,9,0	0/0:13,0:14:2.44:0,2,9	0/0:18,1:23:1.45:0,1,23	0/1:25,1:23:60.85:61,0,86	0/0:15,0:15:11.50:0,11,64	0/1:14,0:13:14:14,0,18	0/0:15,1:14:3.01:0,3,43	0/0:27,1:21:11.80:0,12,150	1/1:8,8:13:14.61:194,15,0	1/1:9,0:6:2.84:14,3,0	1/1:22,13:28:23.84:246,24,0	1/1:7,4:8:8.98:86,9,0	1/1:17,0:16:7.93:112,8,0	0/1:11,0:11:3.54:4,0,4	0/1:8,3:9:45.17:81,0,45
chr10	15287920	.	C	CAG	1601.05	PASS	AB=0.925;AC=22;AF=0.423;AN=52;BaseQRankSum=-5.372;DP=449;FS=2.988;HRun=0;HaplotypeScore=141.3005;InbreedingCoeff=-0.0951;MQ=40.11;MQ0=44;MQRankSum=-2.536;QD=5.41;ReadPosRankSum=0.060;VQSLOD=2.9107;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:40,2:34:14.07:0,14,309	0/1:7,5:11:5.64:134,0,6	./.	./.	0/0:11,0:11:2.56:0,3,9	0/1:13,0:12:14.25:35,0,14	0/1:13,0:10:17.66:81,0,18	0/1:20,0:11:4.19:47,0,4	1/1:6,9:14:5.94:115,6,0	1/1:6,7:10:13.08:166,13,0	1/1:12,5:14:6.02:187,6,0	0/0:11,0:10:13.85:0,14,125	0/0:17,0:16:17.15:0,17,136	0/0:9,1:7:2.91:0,3,63	0/1:13,0:13:2.61:11,0,3	0/1:22,0:22:13.83:39,0,14	0/1:16,10:23:9.46:171,0,9	0/1:15,0:15:2.46:2,0,63	0/1:14,0:13:10.68:11,0,68	0/0:16,0:14:2.59:0,3,42	0/0:30,0:23:24.44:0,24,245	0/1:17,0:14:70.63:71,0,96	0/0:10,0:7:8.81:0,9,61	0/1:36,0:28:23.34:23,0,210	0/1:11,0:8:17.35:17,0,68	1/1:10,6:15:12.26:293,12,0	0/1:4,7:12:14.85:103,0,15	0/1:10,1:9:10.61:249,0,11
chr10	15288073	.	AG	A	2664.51	PASS	AB=1.000;AC=24;AF=0.444;AN=54;BaseQRankSum=7.088;DP=472;FS=20.450;HRun=1;HaplotypeScore=80.4210;InbreedingCoeff=0.8003;MQ=47.44;MQ0=7;MQRankSum=-4.663;QD=11.90;ReadPosRankSum=-2.872;VQSLOD=0.2526;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:24:33.76:34,0,461	1/1:5,0:5:13.17:96,13,0	0/0:16,0:9:3.74:0,4,144	0/0:14,0:5:1.79:0,2,6	1/1:25,0:25:43.73:246,44,0	1/1:10,0:10:19.96:137,20,0	1/1:11,0:10:19.23:138,19,0	1/1:25,3:27:65.39:531,65,0	./.	1/1:0,23:23:45.62:354,46,0	1/1:0,16:16:11.88:83,12,0	0/0:15,0:14:38.98:0,39,464	0/1:9,0:9:2.30:2,0,114	0/0:20,0:19:25.47:0,25,444	0/0:16,0:16:21.73:0,22,310	0/0:8,0:8:20.95:0,21,196	1/1:30,3:33:70.13:566,70,0	0/0:23,0:22:39:0,39,427	0/0:20,0:17:19.14:0,19,518	0/0:22,0:21:36.54:0,37,638	0/0:12,1:13:18.24:0,18,168	0/0:12,0:12:26.37:0,26,319	0/0:17,1:18:37.20:0,37,425	0/0:18,0:18:10.62:0,11,441	0/0:19,0:18:22.25:0,22,401	1/1:24,1:25:63.20:447,63,0	1/1:8,2:9:16.55:155,17,0	1/1:4,0:4:8.97:82,9,0
chr10	15288079	.	GAAAAAA	G	912.09	PASS	AB=0.564;AC=5;AF=0.089;AN=56;BaseQRankSum=-0.518;DP=486;FS=10.463;HRun=17;HaplotypeScore=128.3474;InbreedingCoeff=0.7337;MQ=52.06;MQ0=5;MQRankSum=-4.522;QD=20.73;ReadPosRankSum=2.649;VQSLOD=-0.2071;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:27:69.10:0,69,1408	0/0:5,0:5:14.76:0,15,242	0/0:15,0:9:20.88:0,21,268	0/0:15,0:6:4.80:0,5,25	0/0:28,0:28:70.69:0,71,1167	0/0:9,0:9:24.01:0,24,588	0/0:11,0:10:21.42:0,21,400	0/0:27,0:27:60.72:0,61,779	0/0:15,0:15:4.98:0,5,24	0/0:24,0:24:47.54:0,48,480	0/0:16,0:16:8.76:0,9,73	0/0:12,0:13:27.09:0,27,690	0/0:8,0:8:13.75:0,14,315	0/0:18,0:19:39.08:0,39,871	1/1:4,11:15:26.99:468,27,0	1/1:1,6:7:15:262,15,0	0/0:36,0:36:67.30:0,67,955	0/1:5,17:21:0.71:308,0,1	0/0:7,0:19:50.68:0,51,467	0/0:14,0:24:56.33:0,56,519	0/0:6,0:13:18.01:0,18,171	0/0:14,0:15:41.76:0,42,779	0/0:16,0:18:50.69:0,51,1164	0/0:19,0:19:45.57:0,46,1013	0/0:17,0:18:48.62:0,49,1013	0/0:28,0:28:53.39:0,53,685	0/0:11,0:10:18.63:0,19,270	0/0:3,0:3:6.02:0,6,83
chr10	15289087	.	TA	T	934.74	PASS	AB=0.654;AC=13;AF=0.232;AN=56;BaseQRankSum=3.257;DP=363;FS=0.534;HRun=15;HaplotypeScore=46.2288;InbreedingCoeff=0.4154;MQ=77.89;MQ0=2;MQRankSum=-0.109;QD=7.99;ReadPosRankSum=0.768;VQSLOD=2.3360;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:16,1:19:3.59:0,4,185	0/0:1,0:1:2.99:0,3,24	0/0:37,1:19:28.52:0,29,170	0/0:26,0:16:6.43:0,6,42	0/0:12,2:18:16.07:0,16,218	0/0:13,0:14:11.59:0,12,205	0/1:5,1:6:13.27:13,0,21	0/1:5,8:13:3.33:110,0,3	1/1:1,5:7:13.84:83,14,0	1/1:6,10:17:8.19:172,8,0	1/1:4,8:12:18.07:116,18,0	0/0:10,0:10:20.95:0,21,177	0/0:7,0:7:14.99:0,15,128	0/0:7,0:7:12:0,12,106	0/0:4,0:4:8.90:0,9,68	0/0:2,0:9:11.50:0,11,64	1/1:6,24:31:60.20:377,60,0	0/0:5,0:20:37.41:0,37,220	0/0:14,1:14:7.66:0,8,176	0/0:9,0:10:11.80:0,12,86	0/0:11,0:15:3.67:0,4,158	0/0:4,0:4:9:0,9,79	0/0:6,0:6:14.92:0,15,122	0/0:12,0:14:29.68:0,30,239	0/0:8,0:8:17.98:0,18,153	0/1:8,6:16:22.20:115,0,22	0/1:1,7:9:9.53:66,0,10	0/1:2,3:6:9.33:50,0,9
chr10	15290433	.	GT	G	4023.98	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=5.537;DP=397;FS=4.892;HRun=11;HaplotypeScore=42.0909;InbreedingCoeff=0.9355;MQ=65.59;MQ0=3;MQRankSum=1.156;QD=17.57;ReadPosRankSum=0.949;VQSLOD=4.3276;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:31:84.09:0,84,854	1/1:1,4:5:11.98:99,12,0	0/0:12,0:9:10.31:0,10,90	0/0:3,0:3:3:0,3,27	1/1:2,17:19:44.94:369,45,0	1/1:3,17:20:41.91:339,42,0	1/1:1,10:10:26.97:222,27,0	1/1:9,20:27:56.90:465,57,0	1/1:3,7:10:17.96:148,18,0	1/1:3,10:13:29.91:238,30,0	1/1:3,14:17:35.95:295,36,0	0/0:9,0:9:24.06:0,24,256	0/0:9,0:8:21.01:0,21,211	0/0:12,0:12:27.07:0,27,288	0/0:12,0:12:30.04:0,30,308	0/0:7,0:8:20.89:0,21,205	1/1:2,21:23:56.92:468,57,0	0/0:24,0:25:62.86:0,63,637	1/1:6,11:15:24.77:218,25,0	1/1:1,3:4:8.99:74,9,0	1/1:7,2:9:5.99:49,6,0	0/0:8,0:8:18.03:0,18,184	0/0:11,0:10:18.50:0,19,185	0/0:5,0:5:14.98:0,15,139	0/0:20,0:20:48.09:0,48,501	1/1:4,15:19:38.92:320,39,0	1/1:1,20:21:53.94:443,54,0	1/1:0,11:12:35:277,35,0
chr10	15290661	.	GT	G	2173.35	PASS	AC=24;AF=0.444;AN=54;BaseQRankSum=3.381;DP=338;FS=2.757;HRun=10;HaplotypeScore=45.4058;InbreedingCoeff=0.8868;MQ=79.53;MQ0=1;MQRankSum=-0.785;QD=14.89;ReadPosRankSum=1.484;VQSLOD=3.6757;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:72.19:0,72,796	1/1:0,2:2:3:26,3,0	0/0:20,0:14:20.06:0,20,133	0/0:17,0:12:17.10:0,17,131	1/1:0,0:15:26.48:78,26,0	1/1:3,0:19:22.40:66,22,0	1/1:1,0:7:4.07:12,4,0	1/1:3,19:22:56.99:494,57,0	1/1:0,2:2:6:52,6,0	1/1:0,8:8:24:208,24,0	1/1:4,7:11:14.97:130,15,0	0/0:8,0:8:15.04:0,15,166	0/0:7,0:7:21.05:0,21,225	0/0:10,0:10:30.08:0,30,332	0/0:9,0:9:27.07:0,27,299	0/0:14,0:14:39.10:0,39,429	1/1:5,23:28:65.98:573,66,0	0/0:29,0:29:75.18:0,75,817	0/0:20,0:20:45.12:0,45,498	0/0:2,0:2:6.02:0,6,66	0/0:6,0:6:18.05:0,18,198	./.	0/0:4,0:4:6.02:0,6,66	0/0:5,0:5:9.02:0,9,99	0/0:11,0:11:33.09:0,33,364	1/1:1,14:15:41.97:360,42,0	1/1:0,13:13:32.97:281,33,0	1/1:0,4:4:12:104,12,0
chr10	15290904	.	AT	A	1868.98	PASS	AB=0.820;AC=26;AF=0.464;AN=56;BaseQRankSum=8.394;DP=358;FS=9.989;HRun=13;HaplotypeScore=43.7851;InbreedingCoeff=0.6453;MQ=75.78;MQ0=0;MQRankSum=-0.379;QD=8.90;ReadPosRankSum=1.172;VQSLOD=1.4246;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:39.06:0,39,379	1/1:1,4:5:11.93:88,12,0	0/0:11,0:11:11.78:0,12,87	0/1:6,0:5:17.42:19,0,17	1/1:1,0:14:22.88:67,23,0	1/1:4,0:19:26.46:78,26,0	1/1:3,0:8:10.18:30,10,0	1/1:12,13:26:13.57:242,14,0	1/1:0,11:12:34.85:247,35,0	1/1:3,9:12:26.82:195,27,0	1/1:2,4:6:11.93:87,12,0	0/0:10,1:14:1.80:0,2,153	0/0:10,0:10:17.88:0,18,152	0/0:16,0:17:29.19:0,29,312	0/0:15,1:16:17.14:0,17,323	0/0:7,0:7:18.03:0,18,175	1/1:3,17:22:45.82:318,46,0	0/0:13,0:13:33.04:0,33,315	0/1:20,4:24:27.54:28,0,383	0/0:8,0:8:18.03:0,18,175	0/0:19,1:20:17.11:0,17,319	0/0:2,0:2:6:0,6,54	0/0:4,0:4:9.01:0,9,88	0/0:10,0:11:23.20:0,23,257	0/1:10,2:13:7.94:8,0,236	1/1:3,15:20:48.80:340,49,0	1/1:1,9:11:28.87:203,29,0	0/1:2,7:10:23.80:130,0,24
chr10	15294009	.	TA	T	2458.84	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=6.493;DP=764;FS=7.185;HRun=1;HaplotypeScore=77.1142;InbreedingCoeff=0.9998;MQ=90.33;MQ0=0;MQRankSum=-0.540;QD=36.16;ReadPosRankSum=1.343;VQSLOD=3.8942;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,129,2014	0/0:14,0:14:42.14:0,42,671	0/0:28,0:28:81.23:0,81,1267	0/0:30,1:31:55.78:0,56,1230	1/1:0,16:16:45.15:629,45,0	1/1:0,25:25:63.21:881,63,0	1/1:0,27:27:78.26:1091,78,0	0/0:15,0:15:45.12:0,45,635	0/0:23,0:23:69.22:0,69,1076	0/0:34,0:34:99:0,99,1564	0/0:18,0:18:54.18:0,54,861	0/0:39,0:39:99:0,117,1822	0/0:31,0:31:93.32:0,93,1486	0/0:23,0:23:69.24:0,69,1100	0/0:33,0:33:99:0,99,1557	0/0:22,0:22:66.22:0,66,1049	0/0:40,0:40:99:0,120,1914	0/0:21,0:21:60.20:0,60,953	0/0:24,0:24:69.24:0,69,1099	0/0:24,0:24:72.24:0,72,1139	0/0:41,0:41:99:0,123,1941	0/0:35,0:35:99:0,105,1631	0/0:19,0:19:57.19:0,57,906	0/0:29,0:29:87.26:0,87,1342	0/0:31,0:31:93.32:0,93,1484	0/0:35,0:35:99:0,102,1628	0/0:33,0:33:96.33:0,96,1530	0/0:10,0:10:30.10:0,30,480
chr10	15295951	.	CAT	C	2435.63	PASS	AB=0.980;AC=29;AF=0.518;AN=56;BaseQRankSum=1.618;DP=540;FS=1.809;HRun=0;HaplotypeScore=103.2415;InbreedingCoeff=0.4842;MQ=60.14;MQ0=11;MQRankSum=-2.512;QD=8.01;ReadPosRankSum=-1.188;VQSLOD=3.3749;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:38:50.88:0,51,498	1/1:4,1:5:7.67:64,8,0	0/0:30,0:17:29.67:0,30,353	0/0:29,0:16:28.17:0,28,326	1/1:19,0:19:35.93:291,36,0	1/1:20,0:20:0.11:136,0,0	1/1:21,0:21:28.02:244,28,0	1/1:14,0:13:37.37:292,37,0	0/1:10,2:11:2.09:112,0,2	1/1:10,1:10:26.85:220,27,0	1/1:5,1:6:11.94:90,12,0	0/1:21,0:22:9.62:10,0,292	0/1:24,0:24:23.95:24,0,215	0/0:27,0:26:36.83:0,37,465	0/0:18,0:18:14.06:0,14,244	0/1:23,0:22:99:138,0,99	1/1:16,3:19:14.12:201,14,0	0/1:19,0:16:15.12:15,0,191	0/0:14,0:14:23.70:0,24,309	0/0:20,0:20:19.86:0,20,317	0/1:29,0:28:5.11:5,0,295	0/1:19,0:19:79.66:80,0,141	0/0:14,0:13:23.94:0,24,210	0/0:28,0:28:31.39:0,31,393	0/0:17,0:17:7.97:0,8,263	1/1:16,1:17:37.40:310,37,0	1/1:13,4:16:37.86:291,38,0	1/1:3,4:5:14.93:113,15,0
chr10	15295953	.	T	TACAC	2231.68	PASS	AB=0.929;AC=34;AF=0.654;AN=52;BaseQRankSum=-5.519;DP=570;FS=3.324;HRun=0;HaplotypeScore=133.3669;InbreedingCoeff=0.4119;MQ=57.89;MQ0=14;MQRankSum=4.160;QD=5.44;ReadPosRankSum=-1.968;VQSLOD=2.4409;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:22,17:40:7.15:298,7,0	0/0:5,0:5:3.89:0,4,30	./.	./.	1/1:18,0:18:2.03:5,2,0	1/1:21,0:21:11.83:82,12,0	1/1:21,0:21:5.99:49,6,0	1/1:15,0:13:2.37:8,2,0	0/0:18,0:17:8.96:0,9,80	0/0:12,0:11:0:0,0,0	0/0:11,0:11:3:0,3,28	1/1:15,1:25:20.23:283,20,0	1/1:13,1:25:13.65:121,14,0	1/1:24,3:26:3.27:264,3,0	0/1:18,0:18:18:18,0,19	0/1:24,0:23:7.45:100,0,7	0/0:20,0:19:12.01:0,12,113	1/1:20,0:17:7.25:30,7,0	1/1:12,0:12:7.43:41,7,0	1/1:21,0:21:9.01:118,9,0	1/1:30,0:29:14.99:182,15,0	1/1:19,0:19:12.58:217,13,0	1/1:8,1:14:5.42:83,5,0	1/1:16,12:30:17.63:367,18,0	0/1:12,1:20:8.18:121,0,8	0/0:17,0:17:4.83:0,5,31	0/0:18,0:17:12.86:0,13,113	0/1:8,0:6:4.04:4,0,71
chr10	15295979	.	C	CG	173.60	PASS	AB=0.850;AC=4;AF=0.071;AN=56;BaseQRankSum=2.984;DP=553;FS=22.614;HRun=0;HaplotypeScore=107.2560;InbreedingCoeff=-0.0641;MQ=53.63;MQ0=20;MQRankSum=-1.163;QD=2.63;ReadPosRankSum=-3.865;VQSLOD=0.4816;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:36:44.65:0,45,489	0/0:5,0:5:7.51:0,8,108	0/0:16,0:5:12.04:0,12,166	0/0:30,0:10:27.09:0,27,365	0/0:15,0:15:30.10:0,30,415	0/0:17,0:17:33.55:0,34,433	0/0:23,0:23:39.08:0,39,501	0/0:12,0:9:18.05:0,18,228	0/0:19,0:18:20.84:0,21,528	0/1:17,2:18:58.29:58,0,485	0/1:9,2:12:13.21:40,0,13	0/0:29,0:29:59.65:0,60,743	0/0:22,0:22:31.22:0,31,327	0/0:20,0:20:39.55:0,40,487	0/0:22,0:22:50.78:0,51,688	0/0:22,0:21:38.97:0,39,530	0/0:23,0:22:23.95:0,24,562	0/0:18,0:15:42.11:0,42,560	0/0:13,0:13:39.10:0,39,505	0/0:23,0:23:44.99:0,45,613	0/0:24,0:22:38.86:0,39,507	0/0:22,0:21:46.67:0,47,594	0/0:15,0:14:23.75:0,24,297	0/0:27,0:27:37.77:0,38,401	0/0:21,0:22:39.05:0,39,506	0/1:20,2:22:51.59:52,0,573	0/1:8,5:12:99:133,0,114	0/0:10,0:9:7.22:0,7,186
chr10	15295981	.	CACACACACACAA	C	1942	PASS	AB=0.943;AC=15;AF=0.268;AN=56;BaseQRankSum=1.784;DP=550;FS=6.143;HRun=0;HaplotypeScore=179.4993;InbreedingCoeff=0.1125;MQ=54.12;MQ0=20;MQRankSum=-0.614;QD=10.39;ReadPosRankSum=-1.926;VQSLOD=2.0748;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:35:45.49:0,45,1411	1/1:4,1:5:0.37:108,0,0	0/0:18,0:6:14.63:0,15,179	0/0:28,0:10:29.96:0,30,317	0/1:16,0:16:1.34:1,0,290	0/1:17,0:17:16.22:16,0,853	0/1:23,0:23:99:155,0,134	0/1:12,0:9:58.31:116,0,58	0/1:17,0:17:18.62:258,0,19	0/1:17,0:17:2.09:147,0,2	1/1:12,0:12:6:115,6,0	0/0:30,0:30:62.96:0,63,1523	0/0:21,0:21:28.12:0,28,795	0/0:21,0:21:50.73:0,51,1346	0/0:22,0:22:53.06:0,53,1073	0/0:22,0:21:45.92:0,46,972	1/1:20,3:22:0.70:290,1,0	0/0:17,0:14:39.05:0,39,836	0/0:15,0:15:45.07:0,45,743	0/0:23,0:23:48.04:0,48,880	0/0:25,0:23:42.42:0,42,812	0/0:21,0:20:48.04:0,48,1310	0/0:15,0:14:23.65:0,24,636	0/0:27,0:27:36.98:0,37,1238	0/0:22,0:22:39.05:0,39,914	0/1:19,1:20:39.72:151,0,40	0/1:9,4:12:81.68:478,0,82	0/1:7,3:9:11.96:257,0,12
chr10	15295991	.	CAA	C	2313.59	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=-0.254;DP=519;FS=6.328;HRun=2;HaplotypeScore=102.5150;InbreedingCoeff=0.8274;MQ=59.65;MQ0=17;MQRankSum=2.058;QD=12.64;ReadPosRankSum=1.688;VQSLOD=0.8022;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:33.17:0,33,372	1/1:5,0:5:11.95:115,12,0	0/0:17,0:9:17.19:0,17,211	0/0:25,0:12:32.64:0,33,300	1/1:13,0:13:12.04:135,12,0	0/1:18,0:18:14.56:115,0,15	1/1:26,0:26:37.86:330,38,0	1/1:15,0:12:32.63:233,33,0	1/1:20,0:19:1.74:169,2,0	1/1:0,16:16:44.25:287,44,0	1/1:1,9:10:3:27,3,0	0/0:30,0:30:59.78:0,60,547	0/0:19,0:19:23.58:0,24,210	0/0:20,0:20:50.62:0,51,529	0/0:20,0:20:47.18:0,47,449	0/0:20,0:19:41.69:0,42,380	1/1:19,3:21:27.76:338,28,0	0/0:11,0:11:26.52:0,27,203	0/0:16,0:16:46.17:0,46,394	0/0:25,0:25:43.25:0,43,399	0/0:19,0:19:29.34:0,29,308	0/0:21,0:20:47.94:0,48,474	0/0:15,0:14:24.02:0,24,233	0/0:26,0:26:38.46:0,38,414	0/0:19,0:19:39.01:0,39,415	1/1:3,18:21:57.39:440,57,0	1/1:7,0:7:1.20:182,1,0	1/1:10,0:9:19.65:152,20,0
chr10	15297378	.	AGAACC	A	985.76	PASS	AB=0.905;AC=10;AF=0.179;AN=56;BaseQRankSum=-2.621;DP=508;FS=16.192;HRun=0;HaplotypeScore=103.5810;InbreedingCoeff=-0.2528;MQ=42.88;MQ0=36;MQRankSum=-3.041;QD=5.39;ReadPosRankSum=-3.851;VQSLOD=-0.3610;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:35:89.53:0,90,2048	0/1:3,3:6:48.20:55,0,48	0/0:19,0:2:5.97:0,6,45	0/0:23,0:5:8.88:0,9,134	0/1:28,1:29:99:116,0,407	0/1:18,0:18:23.90:24,0,194	0/0:21,0:20:8.25:0,8,338	0/1:14,0:13:94.14:94,0,566	0/1:14,0:11:42.33:42,0,240	0/1:9,9:18:99:334,0,375	0/1:10,2:11:16.04:16,0,379	0/0:11,1:12:6.35:0,6,480	0/0:12,0:11:33.10:0,33,743	0/0:16,0:16:44.99:0,45,1017	0/0:18,0:18:16.79:0,17,348	0/1:26,0:22:99:290,0,639	0/1:24,0:21:30.41:30,0,449	0/0:11,0:10:6.29:0,6,234	0/0:20,0:18:54.11:0,54,895	0/0:17,0:17:44.75:0,45,589	0/0:8,0:7:20.93:0,21,311	0/0:19,0:19:51.09:0,51,1112	0/0:13,0:12:33.10:0,33,647	0/0:24,0:24:60.53:0,61,1235	0/0:21,0:20:60.18:0,60,1392	0/0:23,0:23:64.08:0,64,1148	0/1:20,1:19:99:126,0,474	0/0:9,0:5:0.46:0,0,141
chr10	15297383	.	C	CAAAAAAAA	5049.56	PASS	AB=0.971;AC=32;AF=0.571;AN=56;BaseQRankSum=-1.306;DP=560;FS=1.629;HRun=15;HaplotypeScore=145.7438;InbreedingCoeff=0.7717;MQ=49.20;MQ0=32;MQRankSum=-7.184;QD=14.64;ReadPosRankSum=-6.816;VQSLOD=-0.5944;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:38:43.93:0,44,897	1/1:7,0:7:6.02:122,6,0	0/0:26,0:6:14.31:0,14,138	0/1:29,0:8:35.10:35,0,67	1/1:18,0:37:35.08:556,35,0	1/1:5,0:22:12.04:258,12,0	1/1:9,0:23:9.97:210,10,0	1/1:17,0:15:24.08:389,24,0	1/1:4,0:14:6.02:130,6,0	1/1:19,0:19:39.23:591,39,0	1/1:10,0:10:18.06:287,18,0	0/1:15,0:16:1.07:1,0,210	0/0:11,0:11:20.05:0,20,301	0/0:15,0:17:16.47:0,16,320	1/1:9,0:18:6.02:129,6,0	1/1:24,0:21:19.09:524,19,0	1/1:11,0:24:14.96:209,15,0	1/1:7,7:15:9.03:210,9,0	0/0:5,0:16:33.82:0,34,404	0/0:4,0:17:32.49:0,32,431	0/0:0,0:8:20.70:0,21,289	0/0:17,0:19:32.11:0,32,511	0/0:13,0:13:4.62:0,5,166	0/0:22,0:24:44.04:0,44,702	0/0:16,0:18:35.44:0,35,603	1/1:11,14:28:45.62:946,46,0	1/1:21,0:20:24.55:364,25,0	1/1:5,0:6:2.78:88,3,0
chr10	15298412	.	T	TGTTG	3487.79	PASS	AB=0.788;AC=13;AF=0.232;AN=56;BaseQRankSum=-5.750;DP=552;FS=59.612;HRun=0;HaplotypeScore=95.3397;InbreedingCoeff=0.3368;MQ=54.45;MQ0=30;MQRankSum=3.077;QD=14.97;ReadPosRankSum=2.610;VQSLOD=0.9594;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:78.48:0,78,884	0/1:7,0:7:0.14:122,0,0	0/0:50,0:12:17.90:0,18,201	0/1:51,0:13:0.76:1,0,183	0/0:22,0:21:33.48:0,33,357	0/0:11,0:10:15.10:0,15,227	0/0:13,0:12:32.88:0,33,372	1/1:11,19:34:20.20:987,20,0	0/1:12,3:15:69.44:411,0,69	1/1:8,11:19:6.18:568,6,0	1/1:7,12:19:16.07:439,16,0	0/0:12,0:12:27.74:0,28,322	0/0:12,0:11:29.96:0,30,381	0/0:18,0:18:44.59:0,45,618	0/0:22,0:20:42.31:0,42,481	0/0:13,0:13:8.15:0,8,163	0/1:13,3:16:14.44:14,0,125	0/0:16,0:15:2.72:0,3,180	0/0:15,0:14:29.30:0,29,364	0/0:23,0:19:39.43:0,39,489	0/0:12,0:11:24.86:0,25,311	0/0:7,0:6:15.94:0,16,241	0/0:11,0:7:16.83:0,17,205	0/0:6,0:6:18.06:0,18,261	0/0:24,0:21:44.42:0,44,631	0/1:16,0:29:27.57:496,0,28	0/1:9,9:20:66.06:305,0,66	0/1:5,0:11:11.49:144,0,11
chr10	15298785	.	GTAC	G	2906.13	PASS	AB=0.697;AC=15;AF=0.278;AN=54;BaseQRankSum=6.448;DP=323;FS=4.522;HRun=0;HaplotypeScore=56.6596;InbreedingCoeff=0.5254;MQ=38.49;MQ0=64;MQRankSum=-7.118;QD=27.16;ReadPosRankSum=-1.753;VQSLOD=2.9630;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:11:24.08:0,24,567	1/1:0,3:3:6.02:106,6,0	./.	0/1:7,0:2:0:0,0,0	0/0:24,0:23:48.16:0,48,1123	0/0:12,0:12:27.09:0,27,638	0/0:10,0:8:24.08:0,24,531	0/1:7,12:16:99:573,0,231	1/1:1,7:7:15.05:261,15,0	1/1:2,9:10:24.08:409,24,0	1/1:5,8:7:12.04:211,12,0	0/0:11,0:10:21.07:0,21,495	0/0:15,0:14:39:0,39,920	0/0:11,0:10:18.06:0,18,385	0/0:7,0:5:12.04:0,12,283	0/0:12,0:11:20.94:0,21,494	0/1:5,7:8:21.77:296,0,22	0/0:17,0:8:21.07:0,21,496	0/0:11,0:9:27.09:0,27,606	0/0:18,0:15:42.14:0,42,987	0/0:15,0:5:9.03:0,9,213	0/0:7,0:6:9.03:0,9,212	0/0:9,0:8:18.06:0,18,425	0/0:4,0:3:6.02:0,6,141	0/0:10,0:10:14.84:0,15,354	1/1:0,14:14:39.13:686,39,0	0/1:2,6:8:49.69:296,0,50	0/1:6,6:9:99:240,0,155
chr10	15298809	.	T	TA	1072.92	PASS	AB=0.727;AC=13;AF=0.232;AN=56;BaseQRankSum=7.478;DP=379;FS=8.054;HRun=0;HaplotypeScore=72.8819;InbreedingCoeff=0.4531;MQ=50.59;MQ0=24;MQRankSum=-7.246;QD=10.73;ReadPosRankSum=1.429;VQSLOD=3.7715;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:50.60:0,51,629	1/1:3,1:4:5.52:42,6,0	0/0:42,0:6:11.48:0,11,90	0/0:37,0:10:7.57:0,8,100	0/0:18,0:18:42.11:0,42,529	0/0:16,0:16:42.13:0,42,556	0/0:6,0:6:18.06:0,18,241	0/1:11,7:17:99:182,0,167	1/1:1,1:2:5.98:53,6,0	1/1:7,7:11:26.50:247,27,0	0/1:6,3:5:4.98:54,0,5	0/0:7,0:7:12.04:0,12,168	0/0:11,0:11:30.02:0,30,360	0/0:14,0:14:27.08:0,27,362	0/0:6,0:6:6.31:0,6,72	0/0:8,0:7:13.69:0,14,85	0/1:7,6:10:1.99:121,0,2	0/0:20,0:16:35.55:0,36,187	0/0:17,0:15:39.58:0,40,322	0/0:20,0:18:45.71:0,46,248	0/0:4,0:4:10.22:0,10,106	0/0:3,0:2:3.01:0,3,36	0/0:6,0:6:15.05:0,15,210	0/0:5,0:5:15.05:0,15,209	0/0:11,0:11:32.82:0,33,389	1/1:3,11:14:34.28:334,34,0	0/1:4,3:6:30.36:60,0,30	0/1:13,5:18:99:147,0,135
chr10	15298810	.	T	TA	2979.92	PASS	AB=0.917;AC=26;AF=0.481;AN=54;BaseQRankSum=3.907;DP=415;FS=6.177;HRun=9;HaplotypeScore=84.3756;InbreedingCoeff=0.5118;MQ=49.56;MQ0=28;MQRankSum=-4.501;QD=12.26;ReadPosRankSum=-0.119;VQSLOD=3.1265;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:53.51:0,54,414	1/1:5,0:5:7.83:70,8,0	0/0:42,2:6:11.31:0,11,69	0/1:43,0:10:0.72:1,0,40	0/0:20,0:20:38.09:0,38,302	0/0:16,0:16:38.56:0,39,308	0/0:6,0:7:17.02:0,17,133	0/1:18,0:17:92.12:193,0,92	1/1:3,0:3:6:57,6,0	1/1:20,0:15:38.65:341,39,0	1/1:9,0:5:2.37:77,2,0	0/0:6,0:6:11.99:0,12,104	0/0:13,0:13:16.83:0,17,125	0/0:14,0:14:26.82:0,27,212	1/1:0,6:6:18.05:199,18,0	1/1:1,8:8:15.03:166,15,0	1/1:15,0:12:8.54:153,9,0	1/1:5,15:16:39.11:431,39,0	0/1:11,8:17:13.48:281,0,13	1/1:10,13:22:44.92:469,45,0	0/1:3,1:4:40.02:54,0,40	./.	0/0:6,0:6:14.98:0,15,127	0/0:5,0:5:14.99:0,15,128	0/0:13,0:13:11.22:0,11,218	1/1:18,0:17:43.95:407,44,0	0/1:8,0:7:8.68:91,0,9	0/1:22,0:22:63.59:187,0,64
chr10	15299209	.	C	CA	6171.56	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-9.052;DP=555;FS=0.732;HRun=6;HaplotypeScore=64.7134;InbreedingCoeff=0.9922;MQ=75.38;MQ0=0;MQRankSum=-2.434;QD=32.48;ReadPosRankSum=-1.497;VQSLOD=4.6342;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:93.20:0,93,949	1/1:1,6:7:18.06:226,18,0	0/0:13,0:13:30.04:0,30,292	0/0:11,0:11:27.06:0,27,271	0/0:27,0:27:66.14:0,66,673	0/0:17,0:17:36.08:0,36,367	0/0:22,0:22:63.14:0,63,642	1/1:2,34:36:99:1268,102,0	1/1:5,14:19:42.13:528,42,0	1/1:5,16:21:51.16:637,51,0	1/1:2,15:17:11.48:442,11,0	0/0:18,0:18:51.11:0,51,520	0/0:22,0:22:57.12:0,57,581	0/0:23,0:23:57.11:0,57,575	0/0:16,0:16:45.10:0,45,459	0/0:15,0:15:42.09:0,42,428	1/1:3,33:36:93.28:1146,93,0	0/0:15,0:15:39.09:0,39,398	0/0:12,0:12:21.04:0,21,214	0/0:18,0:18:54.12:0,54,551	0/0:21,0:21:60.13:0,60,612	0/0:16,0:16:36.08:0,36,367	0/0:17,0:17:45.10:0,45,459	0/0:21,0:21:60.14:0,60,612	0/0:18,0:18:54.12:0,54,551	1/1:1,24:25:72.23:905,72,0	1/1:2,18:20:54.17:679,54,0	1/1:0,9:9:27.09:340,27,0
chr10	15300526	.	GCACACACACACACACACACACA	G	4173.52	PASS	AB=0.628;AC=15;AF=0.300;AN=50;BaseQRankSum=7.980;DP=557;FS=4.226;HRun=0;HaplotypeScore=277.2000;InbreedingCoeff=0.7581;MQ=55.77;MQ0=20;MQRankSum=-5.980;QD=21.29;ReadPosRankSum=-0.582;VQSLOD=1.9490;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:31:33.10:0,33,2300	./.	./.	./.	0/0:7,0:16:8.24:0,8,229	0/0:10,0:20:30.10:0,30,1323	0/0:17,0:24:21.04:0,21,530	1/1:17,7:24:20.36:146,20,0	1/1:13,17:29:18.28:821,18,0	0/1:11,16:26:99:617,0,210	1/1:4,13:17:3.15:11,3,0	0/0:18,0:26:21.07:0,21,1332	0/0:10,0:14:23.69:0,24,1339	0/0:24,0:23:30.56:0,31,1924	0/0:6,0:12:12.04:0,12,819	0/0:9,0:11:15.05:0,15,790	1/1:17,21:37:6.02:347,6,0	0/0:19,0:32:32.93:0,33,1837	0/0:5,0:5:6.02:0,6,330	0/0:11,0:17:33.58:0,34,1803	0/0:36,0:34:48.16:0,48,2332	0/0:5,0:5:9.03:0,9,621	0/0:12,0:11:18.06:0,18,1039	0/0:32,0:35:60.21:0,60,4201	0/0:6,0:8:12.04:0,12,1059	1/1:5,14:19:25.36:841,25,0	1/1:16,18:34:21.54:1216,22,0	1/1:3,4:7:3.01:174,3,0
chr10	15302118	.	AT	A	5310.01	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=11.292;DP=658;FS=0.658;HRun=9;HaplotypeScore=81.3704;InbreedingCoeff=0.9921;MQ=73.90;MQ0=0;MQRankSum=-0.470;QD=21.76;ReadPosRankSum=1.335;VQSLOD=5.4868;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,144,1627	1/1:1,6:7:15.01:137,15,0	0/0:13,0:13:23.73:0,24,216	0/0:9,0:9:13.41:0,13,105	0/0:24,0:24:72.20:0,72,823	0/0:18,0:18:45.12:0,45,508	0/0:16,0:16:48.13:0,48,545	1/1:5,28:33:84:758,84,0	1/1:0,19:19:48.03:439,48,0	1/1:7,34:41:83.17:886,83,0	1/1:2,25:27:71.99:651,72,0	0/0:15,1:16:17.65:0,18,447	0/0:20,0:20:60.17:0,60,682	0/0:20,0:20:48.14:0,48,552	0/0:13,0:13:33.06:0,33,352	0/0:22,0:22:63.13:0,63,681	1/1:2,30:32:72.04:659,72,0	0/0:14,0:14:36.07:0,36,401	0/0:28,0:28:78.20:0,78,874	0/0:24,0:24:63.16:0,63,707	0/0:19,0:19:51.09:0,51,554	0/0:25,0:25:69.15:0,69,753	0/0:23,1:24:44.74:0,45,760	0/0:22,0:22:63.12:0,63,692	0/0:34,0:34:84.24:0,84,962	1/1:5,31:36:92.82:819,93,0	1/1:4,26:30:62.82:576,63,0	1/1:3,16:19:42.02:384,42,0
chr10	15302750	.	TGGAAA	T	1055.84	PASS	AB=0.778;AC=6;AF=0.107;AN=56;BaseQRankSum=6.400;DP=505;FS=1.880;HRun=0;HaplotypeScore=91.1692;InbreedingCoeff=0.6607;MQ=74.92;MQ0=4;MQRankSum=-1.776;QD=30.17;ReadPosRankSum=3.100;VQSLOD=3.6283;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:38:99:0,105,3072	0/0:4,0:4:12.04:0,12,345	0/0:42,0:26:54.30:0,54,1499	0/0:54,0:31:61.11:0,61,1624	0/0:14,0:14:42.14:0,42,1133	0/0:15,0:15:45.10:0,45,1237	0/0:30,0:30:90.25:0,90,2529	0/0:16,0:16:42.14:0,42,1112	0/0:9,0:9:24.08:0,24,751	0/0:23,0:23:69.24:0,69,2102	0/0:11,0:11:24.08:0,24,683	0/0:10,0:10:30.07:0,30,845	0/0:12,0:12:36.12:0,36,995	0/0:16,0:16:45.15:0,45,1315	1/1:3,9:11:21.07:447,21,0	0/1:2,8:9:69.91:415,0,70	0/0:17,0:16:45.15:0,45,1409	1/1:1,7:8:15.05:319,15,0	0/0:16,0:15:39.13:0,39,1030	0/0:6,0:6:12.04:0,12,346	0/0:29,0:29:84.21:0,84,2387	0/0:13,0:13:39.13:0,39,1098	0/0:16,0:16:48.16:0,48,1380	0/0:32,0:31:87.29:0,87,2578	0/0:8,0:8:21.07:0,21,657	0/0:22,0:22:66.23:0,66,1907	0/0:13,0:12:36.12:0,36,1093	0/1:5,0:5:0.86:1,0,269
chr10	15302787	.	GGGAGAGGAGGGAAGAGGAGA	G	1778.19	PASS	AB=0.995;AC=26;AF=0.500;AN=52;BaseQRankSum=2.926;DP=571;FS=0.851;HRun=0;HaplotypeScore=194.3908;InbreedingCoeff=0.6688;MQ=51.76;MQ0=38;MQRankSum=-1.629;QD=6.71;ReadPosRankSum=1.438;VQSLOD=2.8063;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:31:44.80:0,45,1564	1/1:11,0:9:9.02:124,9,0	0/0:89,0:30:26.88:0,27,375	0/1:108,0:22:21.97:22,0,102	0/0:12,0:12:18.05:0,18,584	0/0:7,0:6:9.03:0,9,406	0/0:26,0:24:35.94:0,36,731	./.	1/1:7,0:7:12.03:146,12,0	1/1:18,0:15:15.03:265,15,0	1/1:4,5:9:3.01:36,3,0	0/0:12,0:12:9.03:0,9,280	0/0:11,0:11:15.03:0,15,563	0/0:12,0:11:15.04:0,15,510	1/1:10,0:9:3.01:37,3,0	1/1:10,0:10:8.04:78,8,0	0/1:19,0:15:38.94:112,0,39	1/1:8,0:7:3.01:89,3,0	1/1:10,0:8:6.02:121,6,0	1/1:4,4:7:6.02:108,6,0	1/1:20,0:19:7.38:187,7,0	0/0:13,0:10:21.07:0,21,765	0/0:20,0:19:17.42:0,17,495	0/0:32,0:29:30.10:0,30,1077	0/0:14,0:12:27.05:0,27,920	1/1:14,0:14:18.06:324,18,0	1/1:11,0:10:12.04:323,12,0	./.
chr10	15304501	.	CATAT	C	5392.85	PASS	AB=0.795;AC=32;AF=0.615;AN=52;BaseQRankSum=-0.084;DP=241;FS=11.301;HRun=0;HaplotypeScore=44.8198;InbreedingCoeff=0.6897;MQ=70.43;MQ0=0;MQRankSum=-1.827;QD=28.23;ReadPosRankSum=-0.456;VQSLOD=2.7965;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:27.07:0,27,570	1/1:0,2:2:6.02:104,6,0	0/0:5,0:3:5.91:0,6,49	0/1:16,0:8:1.12:1,0,15	0/0:3,0:12:19.59:0,20,89	0/1:7,1:23:23.61:24,0,86	./.	1/1:9,32:41:92.83:1437,93,0	1/1:0,5:5:12.04:207,12,0	1/1:2,7:9:21.07:363,21,0	1/1:0,1:1:3.01:52,3,0	0/0:6,0:6:18.06:0,18,392	0/0:3,0:3:9.03:0,9,198	./.	1/1:0,4:4:9.03:155,9,0	1/1:0,6:6:12.04:207,12,0	1/1:3,23:26:51.17:881,51,0	1/1:2,10:12:21.07:363,21,0	1/1:1,6:7:18.06:311,18,0	1/1:0,6:6:12.04:207,12,0	1/1:1,4:5:12.04:207,12,0	0/0:3,0:3:6.02:0,6,152	0/0:2,0:2:3.01:0,3,76	0/0:1,0:1:3.01:0,3,76	0/0:5,0:5:15.05:0,15,342	1/1:2,9:11:24.08:410,24,0	1/1:1,6:7:8.95:155,9,0	1/1:0,10:10:18.06:310,18,0
chr10	15305400	.	A	AC	1648.28	PASS	AB=1.000;AC=20;AF=0.357;AN=56;BaseQRankSum=-5.907;DP=441;FS=10.286;HRun=6;HaplotypeScore=63.9457;InbreedingCoeff=0.8414;MQ=80.58;MQ0=0;MQRankSum=-0.751;QD=12.58;ReadPosRankSum=-3.234;VQSLOD=0.9751;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:80.43:0,80,783	1/1:1,6:7:12.04:151,12,0	0/0:11,0:11:20.77:0,21,179	0/0:13,0:13:15.07:0,15,208	0/1:10,0:10:0.84:1,0,162	0/0:13,0:13:34.32:0,34,339	0/0:27,0:27:57.76:0,58,635	1/1:7,7:14:18.05:216,18,0	1/1:2,14:16:18.06:226,18,0	1/1:4,5:9:15.02:161,15,0	1/1:0,5:5:12.04:151,12,0	0/0:21,0:21:15.64:0,16,370	0/0:16,0:16:14.15:0,14,301	0/0:17,0:17:44.58:0,45,434	0/0:18,0:18:35.16:0,35,434	0/1:11,0:11:8.83:9,0,241	1/1:2,20:22:29.89:377,30,0	0/0:25,0:25:54.04:0,54,524	0/0:13,0:13:30.84:0,31,312	0/0:13,0:13:23.72:0,24,244	0/0:24,0:24:42.18:0,42,575	0/0:13,0:13:13.35:0,13,339	0/0:19,0:20:44.13:0,44,433	0/0:24,0:24:63.11:0,63,632	0/0:11,0:11:27.06:0,27,275	1/1:3,4:8:14.98:152,15,0	1/1:3,19:22:26.47:334,26,0	1/1:1,6:7:6.02:75,6,0
chr10	15305727	.	GA	G	2303.13	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=2.212;DP=590;FS=0.472;HRun=4;HaplotypeScore=70.5937;InbreedingCoeff=0.9359;MQ=92.10;MQ0=0;MQRankSum=-1.632;QD=31.12;ReadPosRankSum=2.810;VQSLOD=4.1495;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,123,1683	0/0:8,0:8:21.07:0,21,294	0/0:23,0:23:60.06:0,60,773	0/0:28,0:28:71.63:0,72,924	0/0:9,0:9:27.09:0,27,378	0/0:17,0:17:51.16:0,51,696	0/0:26,0:26:75.25:0,75,1049	0/0:28,0:28:78.25:0,78,1063	0/0:26,0:26:69.19:0,69,929	0/0:20,0:20:60.20:0,60,825	0/0:6,0:6:18.06:0,18,252	0/0:24,0:24:63.21:0,63,881	0/0:22,0:22:66.21:0,66,906	0/0:20,0:20:57.19:0,57,796	1/1:0,31:31:87.27:1044,87,0	1/1:1,11:12:33.10:396,33,0	0/0:34,0:34:96.31:0,96,1326	1/1:2,29:31:84.26:1006,84,0	0/0:19,0:19:54.16:0,54,722	0/0:13,0:13:30.10:0,30,420	0/0:41,0:41:99:0,111,1530	0/0:18,0:18:51.17:0,51,713	0/0:19,0:19:57.18:0,57,775	0/0:22,0:22:66.22:0,66,913	0/0:13,0:13:36.12:0,36,504	0/0:25,0:25:72.24:0,72,1008	0/0:12,0:12:30.10:0,30,419	0/0:1,0:1:3.01:0,3,42
chr10	15307771	.	C	CCT	75.20	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=4.208;DP=505;FS=19.046;HRun=0;HaplotypeScore=80.3864;InbreedingCoeff=0.8378;MQ=69.24;MQ0=4;MQRankSum=-3.887;QD=9.40;ReadPosRankSum=-0.849;VQSLOD=1.6107;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:93.29:0,93,1382	0/0:6,0:6:18.06:0,18,275	0/0:25,0:21:60.16:0,60,845	0/0:17,0:15:45.15:0,45,660	0/0:23,0:23:57.17:0,57,849	0/0:26,0:26:66.21:0,66,990	0/0:20,0:18:54.18:0,54,826	0/0:20,0:18:51.04:0,51,702	0/0:16,0:16:48.16:0,48,734	0/0:22,0:22:60.20:0,60,916	0/0:18,0:18:45.14:0,45,666	0/0:16,0:16:45.15:0,45,689	0/0:15,0:15:45.15:0,45,687	0/0:18,0:18:45.02:0,45,611	1/1:2,2:4:6.02:74,6,0	1/1:1,2:3:6.02:75,6,0	0/0:25,0:22:63.21:0,63,955	1/1:1,0:1:3.01:40,3,0	0/0:21,0:20:51.15:0,51,751	0/0:20,0:20:60.16:0,60,872	0/0:27,0:27:72.18:0,72,1102	0/0:26,0:26:66.22:0,66,1010	0/0:16,0:16:33.83:0,34,544	0/0:33,0:33:90.28:0,90,1336	0/0:15,0:15:39.10:0,39,578	0/0:16,0:16:48.15:0,48,713	0/0:19,0:18:54.17:0,54,806	0/0:5,0:5:15.05:0,15,230
chr10	15308240	.	T	TAC	1704.28	PASS	AB=0.875;AC=18;AF=0.360;AN=50;BaseQRankSum=11.137;DP=765;FS=22.691;HRun=0;HaplotypeScore=176.7354;InbreedingCoeff=0.6867;MQ=57.11;MQ0=15;MQRankSum=-6.070;QD=8.70;ReadPosRankSum=-1.851;VQSLOD=1.2886;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:56:99:0,135,1665	1/1:6,7:13:3.68:92,4,0	0/0:75,0:36:73.53:0,74,852	0/0:61,0:37:29.55:0,30,497	0/0:36,0:35:38.84:0,39,455	0/1:22,0:22:6.20:6,0,130	0/0:32,0:31:4.15:0,4,393	1/1:24,3:21:18.04:281,18,0	1/1:10,8:18:4.39:136,4,0	1/1:22,5:25:29.59:399,30,0	0/1:14,7:20:10.46:87,0,10	0/0:36,0:36:93.26:0,93,1165	0/0:38,0:38:93.30:0,93,1182	0/0:27,0:27:75.19:0,75,911	./.	./.	1/1:15,2:17:6.91:95,7,0	./.	0/0:33,0:32:3.86:0,4,523	0/0:20,0:19:21.05:0,21,254	0/0:51,0:50:20.87:0,21,495	0/0:22,0:22:60.19:0,60,763	0/0:22,0:22:60.16:0,60,745	0/0:36,0:36:87.23:0,87,1088	0/0:22,0:22:38.17:0,38,668	1/1:16,7:23:12.43:486,12,0	1/1:13,6:18:23.19:254,23,0	1/1:8,1:9:1.44:45,1,0
chr10	15309647	.	T	TGATG	4925.21	PASS	AB=0.989;AC=29;AF=0.659;AN=44;BaseQRankSum=-8.832;DP=713;FS=0.000;HRun=0;HaplotypeScore=154.4720;InbreedingCoeff=0.6218;MQ=60.72;MQ0=15;MQRankSum=0.692;QD=9.93;ReadPosRankSum=-2.095;VQSLOD=3.7231;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:43,11:56:15.89:302,16,0	0/0:13,0:13:12.01:0,12,108	./.	./.	1/1:16,0:23:3.48:35,3,0	1/1:13,0:26:12.02:133,12,0	0/1:29,0:30:4.38:134,0,4	./.	0/1:30,0:29:1.71:2,0,122	0/0:27,0:28:15.02:0,15,139	0/0:13,0:13:9.01:0,9,84	1/1:17,14:31:23.70:559,24,0	1/1:16,19:35:42.14:980,42,0	1/1:14,15:29:33.07:719,33,0	./.	./.	0/0:43,0:43:41.44:0,41,501	./.	1/1:28,0:26:9.02:133,9,0	1/1:18,0:18:9.01:112,9,0	1/1:56,0:59:17.85:179,18,0	1/1:17,9:26:12.14:281,12,0	1/1:13,0:17:5.23:75,5,0	1/1:22,14:35:30.10:699,30,0	1/1:12,9:21:26.12:562,26,0	0/1:27,0:28:20.01:20,0,94	0/0:33,0:33:17.97:0,18,430	0/0:5,0:5:3:0,3,28
chr10	15309684	.	GAT	G	912.33	PASS	AB=0.752;AC=8;AF=0.154;AN=52;BaseQRankSum=10.470;DP=642;FS=0.450;HRun=0;HaplotypeScore=124.6151;InbreedingCoeff=-0.1896;MQ=59.72;MQ0=22;MQRankSum=-0.168;QD=5.81;ReadPosRankSum=6.579;VQSLOD=2.3973;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:56:99:0,140,2189	0/1:9,5:14:31.79:32,0,184	0/0:26,0:17:51.17:0,51,730	0/0:42,0:22:57.18:0,57,815	0/0:19,0:19:6.06:0,6,392	0/0:29,0:28:48.16:0,48,767	0/0:26,0:26:63.21:0,63,1053	0/0:27,0:24:68.73:0,69,567	0/1:20,7:26:83.41:83,0,310	0/1:10,4:14:58.21:103,0,58	0/1:10,5:15:31.14:31,0,208	0/0:29,0:29:64.10:0,64,948	0/0:29,0:29:72.24:0,72,1073	0/0:27,0:27:66.21:0,66,983	./.	0/0:1,0:1:3:0,3,25	0/1:17,18:34:99:371,0,194	./.	0/0:19,0:15:45.15:0,45,700	0/0:13,0:12:30.10:0,30,496	0/0:57,0:54:99:0,108,1740	0/0:21,0:20:41.16:0,41,554	0/0:12,0:12:27.07:0,27,390	0/0:30,0:30:75.23:0,75,1114	0/0:21,0:21:60.20:0,60,912	0/1:14,4:18:77.88:100,0,78	0/1:11,17:28:79.09:317,0,79	0/1:5,1:6:5.35:5,0,112
chr10	15309687	.	GGA	G	858.29	PASS	AB=0.745;AC=8;AF=0.154;AN=52;BaseQRankSum=10.860;DP=647;FS=0.000;HRun=0;HaplotypeScore=128.0614;InbreedingCoeff=-0.1843;MQ=61.24;MQ0=22;MQRankSum=-0.288;QD=5.65;ReadPosRankSum=6.863;VQSLOD=2.2762;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,136,2087	0/1:9,5:14:31.60:32,0,180	0/0:30,0:20:60.19:0,60,852	0/0:43,0:24:65.56:0,66,894	0/0:20,0:20:33.94:0,34,460	0/0:28,0:27:51.17:0,51,811	0/0:29,0:29:69.23:0,69,1138	0/0:29,0:26:71.52:0,72,577	0/1:18,7:24:82.22:82,0,304	0/1:8,4:12:60.43:80,0,60	0/1:9,5:14:34.48:34,0,187	0/0:27,0:27:58.08:0,58,861	0/0:28,0:28:69.23:0,69,1029	0/0:28,0:28:69.23:0,69,1047	./.	0/0:1,0:1:2.99:0,3,24	0/1:17,18:34:99:365,0,174	./.	0/0:20,0:16:48.16:0,48,744	0/0:12,0:11:24.07:0,24,390	0/0:59,0:56:99:0,111,1785	0/0:20,0:19:38.14:0,38,510	0/0:13,0:13:30.10:0,30,463	0/0:30,0:30:75.25:0,75,1137	0/0:23,0:23:66.21:0,66,979	0/1:14,4:18:73.96:74,0,100	0/1:11,17:28:74.86:316,0,75	0/1:5,1:6:5.35:5,0,110
chr10	15309927	.	CACAT	C	2572.47	PASS	AC=16;AF=0.364;AN=44;BaseQRankSum=-6.194;DP=528;FS=0.000;HRun=0;HaplotypeScore=136.0670;InbreedingCoeff=0.9299;MQ=53.55;MQ0=9;MQRankSum=4.826;QD=14.45;ReadPosRankSum=6.008;VQSLOD=3.0848;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:18,16:34:36.10:550,36,0	0/0:6,0:12:11.74:0,12,112	./.	./.	0/0:25,0:24:27.09:0,27,501	0/0:20,0:20:39.13:0,39,677	0/0:22,0:22:27.09:0,27,500	0/0:35,0:31:11.96:0,12,105	0/0:9,0:21:17.55:0,18,171	0/0:10,0:21:26.54:0,27,328	0/0:15,0:15:9.03:0,9,159	1/1:17,17:34:39.13:610,39,0	1/1:10,8:18:15.05:234,15,0	1/1:8,11:19:21.07:328,21,0	./.	./.	0/0:11,0:21:21:0,21,237	./.	0/0:25,0:21:21.54:0,22,288	0/0:16,0:25:26.95:0,27,243	0/0:34,0:34:6.02:0,6,104	1/1:5,13:18:24.08:375,24,0	1/1:16,10:26:11.49:187,11,0	1/1:6,6:12:9.03:141,9,0	1/1:7,9:16:21.07:328,21,0	0/0:15,0:26:30.03:0,30,454	0/0:11,0:21:17.98:0,18,183	./.
chr10	15310233	.	C	CT	5542.17	PASS	AB=0.800;AC=28;AF=0.583;AN=48;BaseQRankSum=7.223;DP=301;FS=7.588;HRun=1;HaplotypeScore=43.4404;InbreedingCoeff=0.7796;MQ=38.43;MQ0=44;MQRankSum=-10.773;QD=32.04;ReadPosRankSum=-2.767;VQSLOD=3.0561;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:48.16:0,48,670	1/1:1,3:4:9.03:143,9,0	0/0:21,0:1:3.01:0,3,42	0/0:19,0:2:6.02:0,6,74	1/1:3,17:18:27.09:430,27,0	1/1:0,15:15:39.13:622,39,0	1/1:1,7:7:18.06:287,18,0	1/1:5,12:10:30.02:424,30,0	1/1:0,8:8:24.08:382,24,0	1/1:2,8:8:21.07:335,21,0	1/1:2,11:12:18.06:287,18,0	0/0:11,0:11:33.11:0,33,461	0/1:7,0:7:6.38:6,0,230	0/0:6,0:6:15.05:0,15,210	./.	./.	1/1:1,12:13:30.10:478,30,0	./.	1/1:5,11:13:36.12:575,36,0	1/1:0,15:15:30.10:478,30,0	./.	0/0:6,0:6:18.06:0,18,251	0/0:13,0:12:33.11:0,33,461	0/0:9,0:9:24.08:0,24,335	0/0:19,0:18:54.16:0,54,734	1/1:0,15:15:45.15:718,45,0	1/1:0,9:8:21.07:335,21,0	0/1:1,2:3:32.93:42,0,33
chr10	15310313	.	T	TA	3694.60	PASS	AC=18;AF=0.360;AN=50;BaseQRankSum=9.014;DP=327;FS=5.345;HRun=7;HaplotypeScore=64.4036;InbreedingCoeff=0.8908;MQ=76.49;MQ0=8;MQRankSum=-4.077;QD=27.99;ReadPosRankSum=2.223;VQSLOD=4.5681;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:21:54.07:0,54,516	1/1:1,3:6:18.05:209,18,0	0/0:35,0:17:42.89:0,43,297	0/0:33,0:14:8.75:0,9,53	0/0:19,0:19:51.05:0,51,478	0/0:13,0:13:33:0,33,308	0/0:5,0:5:11.99:0,12,108	1/1:7,18:23:51.55:559,52,0	1/1:0,1:1:3.01:32,3,0	1/1:0,9:11:33.10:391,33,0	1/1:1,15:17:42.04:475,42,0	0/0:6,0:6:12.01:0,12,116	0/0:9,0:9:27.02:0,27,251	0/0:7,0:7:21.03:0,21,199	./.	./.	1/1:7,19:30:69.18:796,69,0	./.	0/0:15,0:15:42:0,42,383	0/0:6,0:6:17.93:0,18,155	0/0:6,0:6:18:0,18,162	0/0:3,0:3:6.01:0,6,57	0/0:4,0:4:9.01:0,9,83	0/0:1,0:1:3:0,3,29	0/0:11,0:11:29.92:0,30,284	1/1:4,7:12:30.04:339,30,0	1/1:0,14:15:39.12:463,39,0	1/1:1,13:14:36.11:431,36,0
chr10	15310458	.	GA	G	3622.48	PASS	AC=18;AF=0.360;AN=50;BaseQRankSum=13.330;DP=478;FS=0.421;HRun=8;HaplotypeScore=85.6823;InbreedingCoeff=0.9704;MQ=64.31;MQ0=0;MQRankSum=-8.668;QD=24.64;ReadPosRankSum=-1.645;VQSLOD=3.5013;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:77.35:0,77,969	1/1:0,2:2:6.01:57,6,0	0/0:18,0:16:33.10:0,33,395	0/0:12,0:12:17.73:0,18,216	0/0:20,0:20:48.13:0,48,568	0/0:24,0:24:66.19:0,66,783	0/0:23,0:23:66.17:0,66,772	1/1:5,29:34:84.06:801,84,0	1/1:0,14:14:39.06:375,39,0	1/1:1,19:19:48.04:470,48,0	1/1:1,5:6:18.03:173,18,0	0/0:23,0:23:66.20:0,66,797	0/0:27,0:27:78.24:0,78,941	0/0:16,0:16:42.13:0,42,506	./.	./.	1/1:4,23:27:63.09:606,63,0	./.	0/0:23,0:22:66.18:0,66,774	0/0:12,0:12:33.10:0,33,398	0/0:29,0:29:83.74:0,84,987	0/0:7,0:6:18.06:0,18,217	0/0:6,0:6:15.05:0,15,181	0/0:52,0:54:99:0,150,1780	0/0:4,0:4:12.03:0,12,137	1/1:2,13:15:40.31:360,40,0	1/1:2,18:20:54.08:520,54,0	1/1:0,9:9:27.04:261,27,0
chr10	15310492	.	C	CG	375.39	PASS	AB=0.715;AC=9;AF=0.180;AN=50;BaseQRankSum=12.053;DP=629;FS=0.554;HRun=0;HaplotypeScore=128.5375;InbreedingCoeff=-0.0036;MQ=57.82;MQ0=0;MQRankSum=-9.895;QD=2.55;ReadPosRankSum=4.338;VQSLOD=2.7537;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,115,1544	1/1:0,2:2:5.81:32,6,0	0/0:29,0:27:81.04:0,81,1054	0/0:23,0:23:66.21:0,66,904	0/0:21,0:21:57.19:0,57,796	0/0:26,0:26:78.24:0,78,1072	0/0:31,0:31:90.29:0,90,1243	0/0:39,2:41:1.49:0,1,550	0/1:13,12:25:72.41:129,0,72	0/1:13,10:21:34.01:34,0,176	0/1:6,5:11:17.17:44,0,17	0/0:40,0:40:99:0,114,1592	0/0:27,0:27:81.27:0,81,1131	0/0:22,0:22:66.22:0,66,922	./.	./.	0/1:21,9:30:81.26:81,0,108	./.	0/0:24,0:23:69.21:0,69,945	0/0:15,0:15:39.13:0,39,545	0/0:44,0:44:99:0,121,1639	0/0:13,0:12:33.09:0,33,443	0/0:10,0:10:27.08:0,27,360	0/0:64,0:64:99:0,184,2540	0/0:10,0:10:24.08:0,24,335	0/1:22,6:28:49.33:49,0,256	0/1:13,11:24:99:128,0,120	0/1:2,2:4:12.83:13,0,16
chr10	15310493	.	A	ACGACGACG	8843.08	PASS	AC=18;AF=0.360;AN=50;BaseQRankSum=13.986;DP=639;FS=1.198;HRun=0;HaplotypeScore=212.2233;InbreedingCoeff=0.9719;MQ=57.76;MQ0=0;MQRankSum=-13.583;QD=46.06;ReadPosRankSum=-1.137;VQSLOD=4.3477;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,119,3169	1/1:0,2:2:6.02:213,6,0	0/0:31,0:29:75.85:0,76,1881	0/0:24,0:24:58.22:0,58,1621	0/0:21,0:21:57.18:0,57,1641	0/0:26,0:26:78.22:0,78,2030	0/0:31,0:31:93.24:0,93,2374	1/1:37,2:39:29.63:950,30,0	1/1:14,11:26:46.18:1603,46,0	1/1:13,9:21:45.81:875,46,0	1/1:6,5:11:24.02:591,24,0	0/0:43,0:43:99:0,120,3147	0/0:27,0:27:81.20:0,81,2223	0/0:23,0:23:66.20:0,66,1844	./.	./.	1/1:23,9:32:71.20:1805,71,0	./.	0/0:24,0:23:68.99:0,69,1604	0/0:15,0:15:45.13:0,45,1222	0/0:44,0:44:99:0,123,3358	0/0:13,0:12:30.01:0,30,700	0/0:9,0:9:27.08:0,27,728	0/0:64,0:64:99:0,184,5345	0/0:10,0:10:27.07:0,27,651	1/1:23,6:29:37.31:974,37,0	1/1:13,11:24:40.35:1568,40,0	1/1:4,2:6:9.03:265,9,0
chr10	15310658	.	T	TGC	8708.39	PASS	AC=18;AF=0.360;AN=50;BaseQRankSum=-11.488;DP=517;FS=4.196;HRun=0;HaplotypeScore=74.3229;InbreedingCoeff=0.9895;MQ=92.91;MQ0=1;MQRankSum=-5.237;QD=49.48;ReadPosRankSum=4.611;VQSLOD=6.1513;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:81.26:0,81,1171	1/1:1,5:6:15.05:280,15,0	0/0:28,0:29:56.93:0,57,927	0/0:25,0:25:63.21:0,63,906	0/0:17,0:17:51.17:0,51,749	0/0:20,0:20:60.20:0,60,882	0/0:21,0:20:60.19:0,60,865	1/1:2,26:27:78.26:1402,78,0	1/1:0,28:29:78.27:1435,78,0	1/1:1,17:18:54.19:1006,54,0	1/1:1,23:23:57.19:1063,57,0	0/0:27,0:27:81.27:0,81,1189	0/0:27,0:27:81.27:0,81,1187	0/0:16,0:16:45.12:0,45,621	./.	./.	1/1:2,28:30:84.27:1537,84,0	./.	0/0:19,0:19:48.15:0,48,687	0/0:15,0:15:39.13:0,39,571	0/0:33,0:33:87.29:0,87,1278	0/0:15,0:15:45.15:0,45,661	0/0:15,0:15:42.14:0,42,609	0/0:27,0:27:81.27:0,81,1191	0/0:6,0:6:12.04:0,12,176	1/1:2,10:13:30.09:530,30,0	1/1:1,22:23:63.22:1176,63,0	1/1:0,5:5:15.05:281,15,0
chr10	15310759	.	T	TGG	241.63	PASS	AB=0.571;AC=5;AF=0.089;AN=56;BaseQRankSum=3.296;DP=627;FS=30.595;HRun=0;HaplotypeScore=124.4833;InbreedingCoeff=0.6674;MQ=64.95;MQ0=11;MQRankSum=-3.945;QD=21.97;ReadPosRankSum=0.593;VQSLOD=1.8566;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,117,1769	0/0:3,0:3:9.03:0,9,147	0/0:74,0:25:11.35:0,11,383	0/0:45,0:15:10.89:0,11,113	0/0:31,0:30:71.90:0,72,564	0/0:21,0:21:46.92:0,47,333	0/0:21,0:20:28.94:0,29,194	0/0:37,0:35:99:0,99,1506	0/0:14,0:14:39.13:0,39,582	0/0:25,0:23:60.65:0,61,881	0/0:18,0:18:48.16:0,48,730	0/0:17,0:17:51.15:0,51,765	0/0:12,0:12:36.08:0,36,532	0/0:19,0:19:57.18:0,57,890	1/1:1,3:4:11.53:154,12,0	1/1:2,1:3:5.98:72,6,0	0/0:29,0:29:77.66:0,78,1106	0/1:1,3:4:18.43:131,0,18	0/0:26,0:25:72.22:0,72,1094	0/0:34,0:33:99:0,99,1346	0/0:18,0:18:54.17:0,54,807	0/0:14,0:13:39.09:0,39,544	0/0:17,0:18:51.58:0,52,709	0/0:33,0:33:96.24:0,96,1446	0/0:14,0:14:42.14:0,42,680	0/0:20,0:19:57.18:0,57,857	0/0:26,0:26:78.20:0,78,1113	0/0:7,0:7:21.07:0,21,312
chr10	15311139	.	A	AT	1197.24	PASS	AB=0.877;AC=21;AF=0.375;AN=56;BaseQRankSum=-5.261;DP=468;FS=17.503;HRun=15;HaplotypeScore=62.0447;InbreedingCoeff=0.2395;MQ=63.20;MQ0=1;MQRankSum=-0.007;QD=4.87;ReadPosRankSum=-4.248;VQSLOD=-0.4160;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:25,8:34:3.28:0,3,229	0/1:2,0:2:0:0,0,0	0/1:6,0:5:0.85:1,0,8	0/0:5,0:3:4.88:0,5,20	0/0:9,0:9:11.65:0,12,72	0/1:13,1:15:7.21:7,0,127	0/0:18,0:18:26.23:0,26,160	0/1:24,12:36:11.32:209,0,11	0/1:6,10:16:14.14:97,0,14	1/1:8,7:16:21.58:153,22,0	1/1:4,7:10:17.94:145,18,0	0/0:9,0:9:2.40:0,2,17	0/0:14,0:14:14.42:0,14,89	0/1:11,0:11:3.06:3,0,75	0/0:3,0:12:12.19:0,12,35	0/0:11,0:22:23.14:0,23,76	0/1:14,23:37:2.21:294,0,2	0/0:14,0:24:29.07:0,29,94	0/1:10,0:18:6.78:7,0,22	0/1:7,0:18:1.69:2,0,28	0/0:10,0:25:27.25:0,27,87	0/0:13,1:15:3.25:0,3,124	0/1:5,0:6:0.84:18,0,1	0/0:27,4:31:24.70:0,25,262	0/1:5,2:7:13.44:13,0,42	1/1:6,10:15:0.83:105,1,0	1/1:20,6:27:37.77:277,38,0	1/1:0,4:4:3:25,3,0
chr10	15311284	.	C	CA	1012.30	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-6.046;DP=387;FS=0.000;HRun=6;HaplotypeScore=35.4217;InbreedingCoeff=0.8951;MQ=73.78;MQ0=0;MQRankSum=-0.003;QD=31.63;ReadPosRankSum=0.396;VQSLOD=3.4298;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:57.13:0,57,581	0/0:7,0:7:18.04:0,18,183	0/0:12,0:12:18.72:0,19,224	0/0:6,0:6:5.94:0,6,59	0/0:23,0:23:66.15:0,66,673	0/0:10,0:10:27.04:0,27,269	0/0:9,0:9:24.03:0,24,237	0/0:32,0:31:72.11:0,72,722	0/0:12,0:12:30.07:0,30,306	0/0:11,0:11:27.06:0,27,275	0/0:23,0:23:66.14:0,66,667	0/0:3,0:3:9.02:0,9,92	0/0:5,0:5:9.02:0,9,92	0/0:9,0:9:27.06:0,27,275	0/0:7,0:7:18.04:0,18,184	0/0:14,0:14:36.08:0,36,367	0/0:33,0:33:87.13:0,87,869	0/0:20,0:20:57.13:0,57,582	1/1:1,16:17:48.13:587,48,0	1/1:0,10:10:30.10:377,30,0	1/1:0,5:5:15.05:188,15,0	0/0:5,0:5:12:0,12,113	0/0:15,0:15:39.09:0,39,398	0/0:8,0:8:24.05:0,24,244	0/0:19,0:19:54.12:0,54,551	0/0:16,0:16:45.10:0,45,459	0/0:29,0:29:84.19:0,84,857	0/0:5,0:5:15.03:0,15,153
chr10	15311607	.	TA	T	2631.66	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=12.442;DP=491;FS=2.460;HRun=8;HaplotypeScore=51.2721;InbreedingCoeff=0.9779;MQ=67.31;MQ0=0;MQRankSum=2.002;QD=21.93;ReadPosRankSum=1.109;VQSLOD=3.8421;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:66.19:0,66,785	0/0:11,0:11:24.54:0,25,291	0/0:5,0:5:12.03:0,12,135	0/0:11,1:12:10.16:0,10,203	1/1:2,27:29:75.04:706,75,0	1/1:0,21:21:54.09:521,54,0	1/1:1,20:21:45.07:435,45,0	0/0:29,0:29:75.19:0,75,858	0/0:14,0:14:33.08:0,33,378	0/0:19,0:19:45.13:0,45,536	0/0:24,0:24:66.20:0,66,797	0/0:9,0:8:24.07:0,24,290	0/0:7,0:7:17.99:0,18,199	0/0:12,0:12:30.02:0,30,344	0/0:19,0:19:57.15:0,57,666	0/0:14,0:14:42.13:0,42,507	0/0:23,0:23:69.20:0,69,821	0/0:23,0:24:65.24:0,65,827	1/1:5,17:22:48.05:462,48,0	1/1:0,14:14:39.06:377,39,0	1/1:1,12:13:33.05:318,33,0	0/0:15,0:15:45.13:0,45,534	0/0:22,0:22:60.16:0,60,703	0/0:9,0:9:21.06:0,21,254	0/0:19,0:19:54.13:0,54,626	0/0:23,0:23:63.19:0,63,761	0/0:30,0:29:78.20:0,78,908	0/0:5,0:5:15.02:0,15,157
chr10	15312406	.	TC	T	5064.51	PASS	AB=0.538;AC=11;AF=0.196;AN=56;BaseQRankSum=16.907;DP=809;FS=1.968;HRun=1;HaplotypeScore=89.8241;InbreedingCoeff=0.8797;MQ=56.46;MQ0=4;MQRankSum=3.536;QD=33.10;ReadPosRankSum=2.382;VQSLOD=4.7605;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:57:99:0,172,2698	0/0:12,0:12:36.11:0,36,550	0/0:26,0:17:48.16:0,48,761	0/0:30,0:28:84.29:0,84,1340	0/1:4,24:28:99:740,0,113	1/1:0,16:15:42.14:545,42,0	1/1:0,23:22:63.20:817,63,0	0/0:26,0:26:78.27:0,78,1242	0/0:23,0:23:66.22:0,66,1054	0/0:39,0:39:99:0,114,1799	0/0:27,0:25:66.22:0,66,1054	0/0:34,0:34:99:0,99,1571	0/0:36,0:36:99:0,108,1725	0/0:32,0:32:93.30:0,93,1460	0/0:25,0:25:75.26:0,75,1198	0/0:33,0:33:99:0,99,1545	0/0:51,0:51:99:0,147,2240	0/0:25,0:25:69.24:0,69,1102	1/1:0,14:11:33.11:428,33,0	1/1:1,21:21:12.26:689,12,0	1/1:3,47:50:99:1846,144,0	0/0:27,0:27:81.28:0,81,1292	0/0:13,0:13:39.12:0,39,595	0/0:38,0:38:99:0,114,1763	0/0:14,0:14:42.11:0,42,642	0/0:44,0:44:99:0,132,2057	0/0:35,0:35:99:0,105,1628	0/0:9,0:9:27.06:0,27,405
chr10	15318748	.	ATTTCCCTTTT	A	3938.56	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=10.138;DP=646;FS=0.000;HRun=0;HaplotypeScore=191.5973;InbreedingCoeff=0.9991;MQ=87.52;MQ0=0;MQRankSum=-10.540;QD=70.33;ReadPosRankSum=-1.349;VQSLOD=2.9322;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,102,4898	0/0:8,0:8:24.08:0,24,1206	0/0:27,0:27:81.28:0,81,3921	0/0:26,0:26:75.23:0,75,3106	1/1:0,18:19:39.13:1193,39,0	1/1:0,14:14:42.14:1364,42,0	1/1:0,23:23:42.14:1381,42,0	0/0:30,0:30:90.30:0,90,4390	0/0:20,0:20:60.21:0,60,3257	0/0:31,0:31:93.32:0,93,4928	0/0:13,0:13:39.13:0,39,2023	0/0:33,0:33:99:0,99,5050	0/0:22,0:22:66.23:0,66,3422	0/0:12,0:12:36.12:0,36,1960	0/0:16,0:16:48.16:0,48,2529	0/0:13,0:13:39.13:0,39,2055	0/0:31,0:31:93.32:0,93,4776	0/0:36,0:36:99:0,105,5356	0/0:20,0:20:60.21:0,60,3133	0/0:20,0:20:60.21:0,60,3233	0/0:49,0:49:99:0,147,7860	0/0:16,0:16:48.16:0,48,2631	0/0:17,0:17:51.18:0,51,2668	0/0:29,0:29:84.29:0,84,4001	0/0:22,0:22:66.23:0,66,3446	0/0:29,0:29:87.30:0,87,4616	0/0:22,0:22:66.23:0,66,3571	0/0:12,0:12:36.12:0,36,1979
chr10	15319118	.	TG	T	1779.75	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=7.762;DP=653;FS=16.041;HRun=2;HaplotypeScore=65.5073;InbreedingCoeff=0.9964;MQ=82.38;MQ0=0;MQRankSum=-1.451;QD=30.17;ReadPosRankSum=-1.638;VQSLOD=1.6597;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,120,1770	0/0:10,0:10:30.10:0,30,450	0/0:19,0:19:56:0,56,807	0/0:22,0:22:63.04:0,63,894	1/1:1,24:25:63.20:794,63,0	1/1:0,17:17:45.15:584,45,0	1/1:1,16:17:42.14:545,42,0	0/0:18,0:18:54.16:0,54,782	0/0:25,0:25:75.25:0,75,1119	0/0:31,0:31:87.28:0,87,1271	0/0:11,0:11:33.11:0,33,494	0/0:30,0:30:90.20:0,90,1320	0/0:25,0:25:75.25:0,75,1122	0/0:36,0:36:99:0,108,1618	0/0:34,0:34:99:0,102,1522	0/0:27,0:27:81.27:0,81,1214	0/0:32,0:32:96.30:0,96,1416	0/0:20,0:20:57.19:0,57,849	0/0:13,0:13:36.12:0,36,537	0/0:22,0:22:63.21:0,63,934	0/0:51,0:51:99:0,150,2206	0/0:18,0:18:51.17:0,51,758	0/0:9,0:9:27.09:0,27,402	0/0:28,0:28:84.24:0,84,1225	0/0:22,0:22:63.17:0,63,916	0/0:20,0:20:54.18:0,54,808	0/0:25,0:25:75.25:0,75,1118	0/0:6,0:6:18.06:0,18,270
chr10	15319801	.	AAAAT	A	1464.29	PASS	AB=0.575;AC=4;AF=0.071;AN=56;BaseQRankSum=4.063;DP=486;FS=0.700;HRun=0;HaplotypeScore=81.6309;InbreedingCoeff=0.4131;MQ=58.24;MQ0=10;MQRankSum=-0.140;QD=27.63;ReadPosRankSum=4.128;VQSLOD=3.5655;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:84.29:0,84,2034	0/0:7,0:7:15.05:0,15,377	0/0:9,0:5:6:0,6,99	0/0:14,0:7:6.49:0,6,156	0/0:27,0:27:75.26:0,75,1844	0/0:22,0:22:60.21:0,60,1508	0/0:16,0:16:42.11:0,42,960	0/0:34,0:31:60.20:0,60,1410	0/0:10,0:10:24.08:0,24,564	0/0:15,0:15:39.13:0,39,937	0/0:17,0:17:39.07:0,39,783	0/0:14,0:14:36.12:0,36,832	0/0:11,0:11:21.07:0,21,484	0/0:12,0:12:24.07:0,24,563	1/1:2,14:16:24.08:427,24,0	0/1:4,9:13:53.38:350,0,53	0/0:27,0:26:63.22:0,63,1530	0/1:5,19:24:14.44:802,0,14	0/0:15,0:12:30.10:0,30,689	0/0:27,0:27:78.25:0,78,1861	0/0:17,0:16:42.14:0,42,1033	0/0:7,0:7:18.05:0,18,387	0/0:13,0:13:30.10:0,30,775	0/0:12,0:12:33.11:0,33,781	0/0:25,0:24:66.23:0,66,1643	0/0:25,0:25:65.25:0,65,1433	0/0:14,0:14:42.12:0,42,945	0/0:14,0:13:27.09:0,27,673
chr10	15319817	.	T	TA	2393.98	PASS	AB=0.977;AC=23;AF=0.411;AN=56;BaseQRankSum=-7.674;DP=471;FS=9.895;HRun=13;HaplotypeScore=54.0897;InbreedingCoeff=0.6323;MQ=61.07;MQ0=8;MQRankSum=0.484;QD=10.83;ReadPosRankSum=-1.320;VQSLOD=1.9210;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,1:29:34.54:0,35,382	1/1:1,3:4:6.01:56,6,0	0/1:10,0:4:6.73:11,0,7	0/1:11,0:7:2.34:2,0,11	0/0:26,1:28:22.02:0,22,352	0/0:21,4:26:8.84:0,9,338	0/0:12,0:14:28.80:0,29,191	1/1:10,19:27:21.53:446,22,0	1/1:2,9:11:3.45:174,3,0	1/1:7,7:14:0.44:147,0,0	1/1:5,12:18:33.03:305,33,0	0/0:11,0:11:11.81:0,12,79	0/0:9,0:9:17.79:0,18,123	0/0:6,0:7:10.96:0,11,68	0/0:19,0:20:40.61:0,41,272	0/0:10,0:11:25.82:0,26,169	1/1:3,20:26:65.35:548,65,0	0/0:24,1:26:2.84:0,3,218	0/1:10,1:11:29.43:29,0,78	0/0:27,0:27:62.42:0,62,430	0/0:13,0:13:34.77:0,35,232	0/1:4,0:4:0:0,0,0	0/0:16,2:18:10.80:0,11,214	0/0:10,0:10:23.80:0,24,164	0/1:25,1:26:0.08:0,0,262	1/1:8,14:22:35.97:320,36,0	1/1:3,12:15:36.04:334,36,0	1/1:5,9:14:23.86:209,24,0
chr10	15320907	.	G	GA	704.54	PASS	AB=1.000;AC=7;AF=0.130;AN=54;BaseQRankSum=7.140;DP=444;FS=17.199;HRun=7;HaplotypeScore=95.5143;InbreedingCoeff=0.6987;MQ=46.14;MQ0=33;MQRankSum=-5.028;QD=13.55;ReadPosRankSum=-2.023;VQSLOD=1.5108;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:26:23.65:0,24,254	0/0:6,0:6:4.51:0,5,80	0/0:4,0:1:0.47:0,0,1	./.	0/0:22,0:20:21:0,21,197	0/0:14,0:12:21.03:0,21,203	0/0:18,0:17:27.04:0,27,259	0/0:20,0:18:23.57:0,24,222	0/1:13,0:13:6.64:7,0,98	0/0:11,0:11:27.04:0,27,256	0/0:20,0:16:17.99:0,18,167	0/0:18,0:17:20.86:0,21,186	0/0:14,0:12:14.95:0,15,139	0/0:14,0:14:17.88:0,18,197	0/0:21,0:20:21.52:0,22,222	0/0:20,0:19:32.89:0,33,306	0/0:28,0:25:35.89:0,36,348	0/0:16,0:15:10.98:0,11,190	1/1:4,8:11:30.03:332,30,0	1/1:8,11:19:33.10:398,33,0	1/1:3,5:8:9.03:105,9,0	0/0:15,0:15:13.60:0,14,198	0/0:15,0:14:20.43:0,20,221	0/0:22,0:16:11.87:0,12,115	0/0:14,0:13:23.75:0,24,226	0/0:21,0:20:36.01:0,36,340	0/0:11,0:11:3.05:0,3,78	0/0:13,0:10:20.25:0,20,156
chr10	15320934	.	A	AGG	660.26	PASS	AB=0.853;AC=4;AF=0.071;AN=56;BaseQRankSum=4.785;DP=531;FS=0.724;HRun=0;HaplotypeScore=91.6139;InbreedingCoeff=0.4384;MQ=52.71;MQ0=41;MQRankSum=1.422;QD=12.46;ReadPosRankSum=-1.879;VQSLOD=3.1696;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:30:68.83:0,69,894	0/0:4,0:4:12.04:0,12,152	0/0:40,0:8:14.59:0,15,149	0/0:26,0:8:11.80:0,12,84	0/0:21,0:19:20.78:0,21,194	0/0:15,0:13:22.08:0,22,189	0/0:17,0:16:25.07:0,25,205	0/0:22,0:21:57.63:0,58,733	0/0:15,0:15:42.09:0,42,547	0/0:13,0:11:30.05:0,30,360	0/0:24,0:20:51.14:0,51,655	0/0:22,0:21:36.10:0,36,451	0/0:12,0:11:12.04:0,12,179	0/0:14,0:14:36.05:0,36,434	0/0:16,0:15:42.10:0,42,520	0/0:14,0:14:35.57:0,36,429	0/0:31,0:28:60.16:0,60,745	0/0:17,0:16:27.09:0,27,382	0/1:20,0:19:37.34:311,0,37	1/1:20,1:21:15.68:180,16,0	0/1:7,5:12:12.43:282,0,12	0/0:9,0:9:27.09:0,27,383	0/0:13,0:13:30.08:0,30,410	0/0:21,0:15:22.78:0,23,273	0/0:12,0:11:32.44:0,32,370	0/0:26,0:25:75.22:0,75,980	0/0:18,0:17:39.12:0,39,490	0/0:23,0:17:42.14:0,42,596
chr10	15322872	.	TC	T	2240.34	PASS	AB=1.000;AC=25;AF=0.463;AN=54;BaseQRankSum=9.573;DP=422;FS=2.207;HRun=7;HaplotypeScore=73.4556;InbreedingCoeff=0.8371;MQ=64.73;MQ0=15;MQRankSum=-3.922;QD=12.38;ReadPosRankSum=1.893;VQSLOD=2.7491;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:61.66:0,62,629	1/1:4,4:8:12.02:117,12,0	0/0:20,1:10:1.35:0,1,91	0/0:18,0:8:2.14:0,2,30	0/0:4,0:3:0:0,0,0	./.	0/1:7,0:6:0.26:0,0,12	1/1:5,7:17:5.09:239,5,0	1/1:7,5:15:31.42:237,31,0	1/1:5,5:14:22.74:173,23,0	1/1:3,8:12:23.94:224,24,0	0/0:24,0:23:36.53:0,37,320	0/0:9,0:8:12.01:0,12,120	0/0:15,0:13:35.53:0,36,344	1/1:7,5:12:17.65:163,18,0	1/1:8,6:15:23.58:160,24,0	1/1:2,14:17:29.17:263,29,0	1/1:10,8:21:35.92:273,36,0	0/0:12,0:23:34.52:0,35,214	0/0:2,0:10:20.42:0,20,127	0/0:7,0:16:17.54:0,18,138	0/0:11,0:11:16.13:0,16,112	0/0:12,0:13:12.70:0,13,307	0/0:13,0:13:26.76:0,27,280	0/0:22,0:22:49.70:0,50,453	1/1:8,11:20:29.08:276,29,0	1/1:3,6:11:21.10:159,21,0	1/1:1,6:9:12.02:160,12,0
chr10	15323152	.	C	CGT	558.84	PASS	AB=0.980;AC=13;AF=0.260;AN=50;BaseQRankSum=-0.882;DP=634;FS=2.955;HRun=0;HaplotypeScore=130.7117;InbreedingCoeff=0.1290;MQ=70.75;MQ0=19;MQRankSum=2.961;QD=2.00;ReadPosRankSum=0.093;VQSLOD=2.6694;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:31:1.73:2,0,95	0/0:7,0:6:5.54:0,6,28	./.	./.	0/1:23,0:23:0.12:0,0,0	0/0:16,0:16:2.79:0,3,14	0/1:21,0:21:0:0,0,0	0/1:29,0:29:0:0,0,0	0/0:26,0:26:17.67:0,18,110	0/0:25,0:25:14.04:0,14,69	0/1:21,0:20:0:0,0,0	0/0:24,0:24:12.50:0,12,131	0/0:18,0:19:17.81:0,18,161	0/1:16,0:16:8.75:9,0,165	0/1:26,5:30:19.58:232,0,20	1/1:19,4:22:0.04:199,0,0	0/0:26,0:26:8.44:0,8,42	0/1:20,1:21:36.50:184,0,36	1/1:17,0:14:0.47:1,0,0	0/0:10,0:10:5.04:0,5,36	0/1:44,0:45:22.27:38,0,22	0/0:7,0:7:6.01:0,6,65	0/0:20,0:20:6.01:0,6,65	0/0:26,0:27:21.40:0,21,234	0/0:12,0:13:11.70:0,12,93	0/0:28,0:27:28.31:0,28,137	0/0:18,0:18:11.36:0,11,56	./.
chr10	15323179	.	GTGTGTGTGTGTGTGTA	G	3754.54	PASS	AB=0.992;AC=15;AF=0.268;AN=56;BaseQRankSum=8.211;DP=576;FS=7.012;HRun=0;HaplotypeScore=211.0607;InbreedingCoeff=0.1535;MQ=51.80;MQ0=28;MQRankSum=-4.255;QD=16.47;ReadPosRankSum=0.458;VQSLOD=1.7096;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:30:75.12:0,75,3095	1/1:6,1:6:9.03:276,9,0	0/0:30,0:5:5.17:0,5,92	0/0:33,0:5:4.22:0,4,62	0/0:18,1:19:2.40:0,2,22	0/1:17,0:17:99:166,0,116	0/1:23,0:23:61.02:102,0,61	0/1:25,0:23:96.84:188,0,97	0/1:31,1:32:99:740,0,103	0/1:21,0:21:3.65:424,0,4	0/0:17,0:16:5.40:0,5,49	0/0:21,0:21:51.15:0,51,2388	0/0:19,0:19:48.07:0,48,2391	0/0:15,0:15:30.09:0,30,1730	0/0:25,0:24:36.24:0,36,3003	0/1:19,0:18:2.84:3,0,1647	0/1:24,1:24:99:333,0,146	0/0:19,0:19:54.16:0,54,2558	0/1:9,0:7:8.40:8,0,312	0/0:15,0:15:6.91:0,7,335	0/0:38,0:38:39.10:0,39,1074	0/0:8,0:8:13.81:0,14,438	0/0:15,0:15:30.09:0,30,1369	0/0:31,0:31:74.01:0,74,3285	0/0:12,0:11:27.06:0,27,993	1/1:27,1:27:26.56:1148,27,0	1/1:13,0:12:15.02:339,15,0	0/1:9,0:8:24.37:26,0,24
chr10	15323181	.	GTGTGTGTGTGTGTA	G	5601.36	PASS	AB=0.796;AC=19;AF=0.339;AN=56;BaseQRankSum=6.626;DP=565;FS=8.466;HRun=0;HaplotypeScore=188.1991;InbreedingCoeff=0.3484;MQ=52.06;MQ0=27;MQRankSum=-4.175;QD=23.44;ReadPosRankSum=-0.654;VQSLOD=3.1481;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:75.18:0,75,2548	1/1:2,5:6:9.03:334,9,0	0/0:27,0:6:8.12:0,8,91	0/0:32,0:5:3.74:0,4,60	0/0:20,0:20:2.43:0,2,21	0/1:15,3:18:23.26:259,0,23	0/1:19,0:19:26.29:150,0,26	0/1:7,17:22:3.33:394,0,3	0/1:7,24:31:42.95:1080,0,43	1/1:3,18:21:37.41:788,37,0	1/1:4,13:16:0.32:1,0,0	0/0:21,0:21:51.13:0,51,1971	0/0:18,0:18:48.07:0,48,2050	0/0:14,0:14:30.09:0,30,1492	0/0:25,0:24:15.27:0,15,2478	0/1:18,0:17:27.78:28,0,1331	0/1:6,19:24:99:363,0,101	0/0:19,0:19:51.14:0,51,2122	0/1:9,0:7:22.88:23,0,216	0/0:15,0:15:6.91:0,7,282	0/0:39,0:39:33.11:0,33,868	0/0:9,0:9:16.86:0,17,367	0/0:14,0:14:30.07:0,30,1167	0/0:30,0:30:64.97:0,65,2737	0/0:12,0:11:27.04:0,27,828	1/1:6,23:28:73.84:1567,74,0	1/1:3,9:11:12.04:501,12,0	1/1:9,0:8:14.79:114,15,0
chr10	15323183	.	GTGTGTGTGTGTA	G	4668.11	PASS	AB=0.932;AC=23;AF=0.411;AN=56;BaseQRankSum=6.603;DP=560;FS=7.475;HRun=0;HaplotypeScore=176.1440;InbreedingCoeff=0.4734;MQ=52.61;MQ0=26;MQRankSum=-4.231;QD=16.91;ReadPosRankSum=-0.299;VQSLOD=3.3520;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:30:78.08:0,78,2098	1/1:7,0:6:8.87:252,9,0	0/0:30,0:10:20.14:0,20,211	0/0:31,0:6:6.44:0,6,92	0/1:2,18:20:0.13:0,0,0	1/1:17,2:19:34.96:346,35,0	1/1:17,1:18:32.02:305,32,0	1/1:23,0:21:1.94:285,2,0	0/1:29,0:29:18.26:796,0,18	1/1:19,1:20:37.66:663,38,0	1/1:16,0:15:0.15:0,0,0	0/0:19,0:19:51.15:0,51,1738	0/0:18,0:18:48.07:0,48,1719	0/0:13,0:13:30.05:0,30,1257	0/1:26,0:25:8.21:8,0,1969	0/1:18,0:17:49.72:50,0,1071	0/1:25,0:24:75.17:294,0,75	0/0:19,0:19:47.56:0,48,1670	0/1:8,0:7:25.44:25,0,148	0/0:16,0:16:6.91:0,7,229	0/0:40,0:40:33.03:0,33,577	0/0:10,0:10:16.96:0,17,285	0/0:14,0:14:27.04:0,27,966	0/0:29,0:29:65.49:0,65,2332	0/0:13,0:12:30.03:0,30,729	1/1:27,0:26:53.95:1229,54,0	1/1:12,0:11:12.04:366,12,0	0/1:8,0:7:1.28:48,0,1
chr10	15323193	.	GTA	G	2750.07	PASS	AB=0.837;AC=30;AF=0.536;AN=56;BaseQRankSum=6.559;DP=514;FS=5.044;HRun=0;HaplotypeScore=108.1540;InbreedingCoeff=0.6031;MQ=56.31;MQ0=17;MQRankSum=-3.499;QD=8.44;ReadPosRankSum=-0.008;VQSLOD=3.2119;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:25:42.93:0,43,548	1/1:7,0:6:8.88:61,9,0	0/0:28,0:13:29.15:0,29,303	0/0:24,0:13:25.56:0,26,256	0/1:19,0:19:0.01:0,0,1	1/1:17,0:17:35.88:284,36,0	1/1:17,0:17:34.47:273,34,0	1/1:22,0:20:41.79:321,42,0	1/1:26,0:26:26.84:199,27,0	1/1:20,0:20:39.25:296,39,0	0/1:13,0:13:0.03:0,0,0	0/0:15,0:15:36.51:0,37,443	0/0:19,0:19:42.61:0,43,490	0/0:16,0:16:9.23:0,9,458	0/1:24,1:24:15.07:192,0,15	1/1:20,0:19:1.19:176,1,0	1/1:23,0:22:11.89:85,12,0	0/1:16,0:16:65.39:65,0,66	1/1:7,0:7:14.88:137,15,0	0/1:3,15:18:24.26:39,0,24	0/1:2,31:33:6.05:141,0,6	0/0:11,0:11:18.41:0,18,157	0/0:11,0:11:17.71:0,18,232	0/0:26,0:26:43.03:0,43,658	0/0:12,0:12:8.55:0,9,255	1/1:27,0:26:68.74:536,69,0	1/1:11,0:10:11.92:87,12,0	1/1:5,0:4:8.85:56,9,0
chr10	15323372	.	GA	G	5804.68	PASS	AB=0.716;AC=50;AF=0.893;AN=56;BaseQRankSum=-2.761;DP=492;FS=4.788;HRun=13;HaplotypeScore=55.4446;InbreedingCoeff=0.1869;MQ=56.98;MQ0=7;MQRankSum=0.313;QD=12.07;ReadPosRankSum=3.042;VQSLOD=4.8652;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,33:38:58.48:588,58,0	0/1:3,3:6:17.24:54,0,17	0/1:10,0:5:15.63:16,0,21	0/0:11,0:6:10.55:0,11,67	1/1:4,0:19:27.41:92,27,0	1/1:8,0:20:20.12:57,20,0	1/1:2,2:19:28.87:115,29,0	1/1:8,18:28:32.10:349,32,0	1/1:5,8:12:20.86:153,21,0	1/1:7,13:20:14.86:261,15,0	1/1:8,10:18:35.71:259,36,0	1/1:3,9:13:19.22:136,19,0	1/1:5,7:13:16.83:115,17,0	1/1:5,12:18:37.80:268,38,0	1/1:4,11:15:26.68:197,27,0	1/1:6,8:14:2.44:173,2,0	1/1:8,20:30:19.57:402,20,0	1/1:9,13:20:38.73:284,39,0	0/1:14,15:29:18.95:363,0,19	1/1:4,9:13:29.79:219,30,0	1/1:2,11:13:32.81:241,33,0	0/1:1,6:7:8.29:110,0,8	1/1:5,8:13:1.44:112,1,0	1/1:10,9:18:26.74:191,27,0	1/1:2,9:11:23.85:175,24,0	1/1:8,16:23:50.11:351,50,0	1/1:6,11:16:29.64:218,30,0	1/1:3,14:15:41.76:306,42,0
chr10	15324382	.	CACCAGCACCAGCACCAGA	C	278.96	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=3.730;DP=390;FS=9.229;HRun=0;HaplotypeScore=163.3372;InbreedingCoeff=0.6997;MQ=58.90;MQ0=8;MQRankSum=0.752;QD=4.23;ReadPosRankSum=-1.306;VQSLOD=2.1332;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:66.15:0,66,2586	0/0:7,0:7:17.99:0,18,430	0/0:22,0:8:15.02:0,15,212	0/0:22,0:10:9.90:0,10,74	0/0:10,0:9:12.84:0,13,185	0/0:13,0:12:30.49:0,30,1028	0/0:24,0:24:24.52:0,25,777	0/0:10,0:10:27.03:0,27,319	0/0:6,0:6:15.02:0,15,727	0/0:14,0:14:42.14:0,42,1675	0/0:10,0:10:24.07:0,24,1010	0/0:13,0:13:39.12:0,39,2533	0/0:6,0:6:12.01:0,12,409	0/0:14,0:14:42.13:0,42,2881	0/0:11,0:11:23.94:0,24,1016	0/0:10,0:9:21.06:0,21,757	0/0:26,0:26:54.11:0,54,2193	0/1:21,0:21:35.79:36,0,980	1/1:5,7:7:14.99:191,15,0	1/1:6,0:6:15.02:168,15,0	1/1:5,22:27:2.94:18,3,0	0/0:5,0:5:12.02:0,12,302	0/0:4,0:4:12.02:0,12,352	0/0:24,0:24:66.20:0,66,3238	0/0:9,0:9:18.05:0,18,1078	0/0:13,0:13:36.08:0,36,1647	0/0:10,0:10:24.05:0,24,1044	0/0:6,0:6:18.06:0,18,811
chr10	15324866	.	TTCTC	T	176.77	PASS	AB=0.913;AC=15;AF=0.341;AN=44;BaseQRankSum=1.575;DP=307;FS=1.541;HRun=0;HaplotypeScore=59.8743;InbreedingCoeff=0.4237;MQ=78.27;MQ0=10;MQRankSum=1.253;QD=1.49;ReadPosRankSum=2.493;VQSLOD=1.0568;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:0.89:0,1,2	0/0:5,0:4:6.02:0,6,88	./.	0/1:34,0:23:0:0,0,0	./.	1/1:13,0:17:5.22:35,5,0	1/1:4,0:7:2.37:8,2,0	0/0:20,0:20:15.99:0,16,197	0/0:9,0:9:3.01:0,3,46	0/0:16,0:16:18.91:0,19,219	0/1:2,0:2:0:0,0,0	1/1:4,1:5:3.01:47,3,0	1/1:8,1:9:2.75:47,3,0	./.	0/0:2,0:6:3.01:0,3,52	0/0:9,0:12:2.51:0,3,24	0/0:17,0:17:15.89:0,16,200	0/0:10,0:8:12.04:0,12,207	./.	./.	1/1:26,0:26:1.55:4,2,0	1/1:2,0:2:3:26,3,0	0/0:4,2:5:0:0,0,0	0/1:11,6:17:6.74:128,0,7	./.	0/0:9,0:9:9:0,9,108	0/0:10,0:12:3.48:0,3,53	0/0:7,0:6:12.01:0,12,134
chr10	15326211	.	A	AAAAT	1263.47	PASS	AC=16;AF=0.296;AN=54;BaseQRankSum=-0.406;DP=298;FS=0.000;HRun=0;HaplotypeScore=49.4327;InbreedingCoeff=0.7059;MQ=57.39;MQ0=0;MQRankSum=-3.319;QD=17.07;ReadPosRankSum=1.188;VQSLOD=2.8382;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:57.15:0,57,839	0/0:2,0:2:3.01:0,3,48	0/0:10,0:6:3.01:0,3,48	0/0:5,0:5:3.01:0,3,48	1/1:2,3:6:9.03:217,9,0	1/1:7,7:14:18.06:435,18,0	1/1:3,3:6:9.03:217,9,0	0/0:41,0:41:57.18:0,57,876	0/0:8,0:8:9.03:0,9,145	0/0:8,0:8:12.04:0,12,186	0/0:6,0:6:9.03:0,9,143	0/0:4,0:4:12.04:0,12,194	0/0:3,0:3:9.03:0,9,145	0/0:7,0:7:6.02:0,6,97	1/1:6,0:8:3.01:52,3,0	1/1:5,0:7:3.01:52,3,0	0/0:24,0:24:42.13:0,42,655	0/0:11,0:11:5.93:0,6,40	1/1:14,0:16:12.04:200,12,0	1/1:7,0:10:9.03:157,9,0	1/1:4,0:6:6.02:105,6,0	0/0:5,0:5:6.02:0,6,97	0/0:6,0:6:12.04:0,12,194	./.	0/0:10,0:10:18.05:0,18,269	0/0:20,0:20:33.11:0,33,526	0/0:12,0:12:24.08:0,24,388	0/0:11,0:10:24.08:0,24,388
chr10	15326338	.	AAAAG	A	4010.51	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=9.361;DP=332;FS=5.784;HRun=0;HaplotypeScore=52.6633;InbreedingCoeff=0.8320;MQ=61.58;MQ0=7;MQRankSum=1.915;QD=25.87;ReadPosRankSum=-0.244;VQSLOD=2.4088;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:57.19:0,57,1308	1/1:0,4:4:9.03:148,9,0	0/1:27,0:6:4.01:4,0,68	0/0:16,0:3:2.92:0,3,17	0/0:6,0:6:12.04:0,12,296	0/0:14,0:14:36.11:0,36,792	0/0:8,0:8:12.04:0,12,258	1/1:14,13:27:39.09:532,39,0	1/1:1,8:9:15.05:250,15,0	1/1:1,12:13:36.11:565,36,0	1/1:1,11:12:27.05:401,27,0	0/0:5,0:5:15.05:0,15,355	0/0:10,0:10:27.09:0,27,584	0/0:5,0:5:9.03:0,9,205	0/0:5,0:5:12.04:0,12,246	0/0:7,0:7:12.04:0,12,295	1/1:5,18:21:42.14:699,42,0	0/0:24,0:24:54.10:0,54,1212	0/0:14,0:14:30.10:0,30,650	0/0:5,0:5:6.02:0,6,118	0/0:12,0:12:30.10:0,30,712	0/0:2,0:2:6.02:0,6,96	0/0:3,0:3:9.03:0,9,209	0/0:4,0:4:12.04:0,12,281	0/0:14,0:14:30.10:0,30,675	1/1:1,9:10:27.09:413,27,0	1/1:6,7:13:21.07:350,21,0	1/1:3,14:17:39.13:648,39,0
chr10	15326608	.	TG	T	4915.49	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=5.359;DP=509;FS=9.863;HRun=5;HaplotypeScore=57.2150;InbreedingCoeff=0.9961;MQ=79.14;MQ0=0;MQRankSum=0.747;QD=29.43;ReadPosRankSum=2.658;VQSLOD=5.0664;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,108,1421	1/1:1,10:11:24.07:272,24,0	0/0:25,0:25:66.13:0,66,869	0/0:20,0:20:51.16:0,51,677	0/0:12,0:12:33.11:0,33,451	0/0:14,0:14:39.13:0,39,529	0/0:21,0:21:54.16:0,54,720	1/1:3,18:21:54.15:612,54,0	1/1:0,18:18:48.14:545,48,0	1/1:0,19:19:54.14:603,54,0	1/1:0,5:5:15.04:170,15,0	0/0:15,0:15:45.15:0,45,614	0/0:16,0:16:48.16:0,48,653	0/0:23,0:23:69.21:0,69,926	0/0:16,0:16:48.16:0,48,656	0/0:11,0:11:33.11:0,33,451	1/1:1,37:38:99:1258,111,0	0/0:20,0:20:54.18:0,54,738	0/0:20,0:20:54.16:0,54,708	0/0:11,0:11:33.08:0,33,419	0/0:32,0:32:87.23:0,87,1137	0/0:9,0:9:21.07:0,21,286	0/0:11,0:11:30.10:0,30,409	0/0:11,0:11:27.09:0,27,369	0/0:14,0:14:39.13:0,39,533	1/1:4,17:21:54.15:605,54,0	1/1:2,20:22:45.13:510,45,0	1/1:1,11:12:30.09:340,30,0
chr10	15327437	.	CTG	C	6940.33	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=10.823;DP=658;FS=0.331;HRun=0;HaplotypeScore=85.2567;InbreedingCoeff=0.9981;MQ=61.40;MQ0=1;MQRankSum=1.877;QD=37.93;ReadPosRankSum=-0.732;VQSLOD=6.6307;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,123,2284	1/1:1,9:10:21.02:308,21,0	0/0:28,0:23:50.90:0,51,832	0/0:19,0:15:42.13:0,42,687	0/0:20,0:20:60.18:0,60,1088	0/0:26,0:26:78.23:0,78,1364	0/0:27,0:27:81.26:0,81,1484	1/1:3,26:29:69.17:916,69,0	1/1:0,16:16:42.14:618,42,0	1/1:0,25:25:75.24:1084,75,0	1/1:0,20:20:54.18:792,54,0	0/0:21,0:21:54.19:0,54,1010	0/0:19,0:19:54.17:0,54,973	0/0:22,0:22:66.20:0,66,1172	0/0:36,0:36:99:0,102,1831	0/0:17,0:16:45.14:0,45,811	1/1:3,26:29:72.24:1059,72,0	0/0:30,0:30:90.30:0,90,1616	0/0:18,0:17:48.12:0,48,775	0/0:21,0:21:57.18:0,57,1027	0/0:36,0:36:99:0,108,1913	0/0:27,0:27:78.25:0,78,1427	0/0:18,0:18:51.15:0,51,912	0/0:31,0:31:87.30:0,87,1592	0/0:17,0:17:48.15:0,48,867	1/1:1,17:18:51.17:751,51,0	1/1:2,28:30:78.26:1147,78,0	1/1:0,6:6:18.06:265,18,0
chr10	15328098	.	CG	C	1862.02	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.211;DP=629;FS=3.855;HRun=4;HaplotypeScore=60.7949;InbreedingCoeff=0.9970;MQ=85.03;MQ0=0;MQRankSum=-4.205;QD=26.99;ReadPosRankSum=-0.276;VQSLOD=2.5747;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:81.25:0,81,1099	0/0:6,0:6:18.06:0,18,252	0/0:22,0:22:62.80:0,63,793	0/0:26,0:25:42.21:0,42,646	1/1:2,22:24:57.07:638,57,0	1/1:1,24:25:66.20:791,66,0	1/1:1,19:20:48.15:576,48,0	0/0:40,0:40:99:0,102,1352	0/0:13,0:13:36.12:0,36,503	0/0:34,0:34:99:0,99,1359	0/0:20,0:20:57.18:0,57,780	0/0:22,0:22:63.21:0,63,879	0/0:19,0:19:54.16:0,54,735	0/0:26,0:26:75.24:0,75,1030	0/0:18,0:18:54.17:0,54,739	0/0:20,0:20:54.17:0,54,739	0/0:20,0:20:60.19:0,60,823	0/0:23,0:23:69.20:0,69,931	0/0:19,0:19:57.16:0,57,761	0/0:21,0:21:63.21:0,63,881	0/0:27,0:27:78.21:0,78,1036	0/0:17,0:17:51.14:0,51,670	0/0:22,0:22:66.21:0,66,905	0/0:27,0:27:81.24:0,81,1099	0/0:20,0:20:60.20:0,60,839	0/0:26,0:26:75.21:0,75,986	0/0:30,0:28:87.27:0,87,1179	0/0:11,0:11:33.11:0,33,461
chr10	15328258	.	T	TAA	4483.10	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-8.084;DP=588;FS=0.000;HRun=10;HaplotypeScore=70.6265;InbreedingCoeff=0.9946;MQ=76.90;MQ0=0;MQRankSum=1.136;QD=23.72;ReadPosRankSum=-3.793;VQSLOD=3.5915;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:87.08:0,87,847	1/1:3,6:9:15.05:224,15,0	0/0:19,0:20:20.44:0,20,238	0/0:20,0:19:31.81:0,32,364	0/0:26,0:28:56.52:0,57,542	0/0:23,0:25:35.41:0,35,392	0/0:10,0:10:23.98:0,24,234	1/1:10,20:33:32.58:734,33,0	1/1:0,15:16:21.07:313,21,0	1/1:11,14:25:33.07:432,33,0	1/1:8,14:23:38.44:446,38,0	0/0:15,0:16:26.72:0,27,327	0/0:15,0:15:33.02:0,33,325	0/0:21,0:22:59.84:0,60,591	0/0:17,0:17:29.98:0,30,299	0/0:25,0:26:68.84:0,69,683	1/1:5,20:31:58.65:755,59,0	0/0:26,0:26:72.08:0,72,714	0/0:28,0:28:60.06:0,60,599	0/0:22,0:22:41.96:0,42,400	0/0:14,0:14:33.04:0,33,329	0/0:16,0:16:36.01:0,36,353	0/0:23,0:23:54.05:0,54,535	0/0:17,0:17:51.11:0,51,519	0/0:23,0:23:48:0,48,475	1/1:2,19:22:54.10:716,54,0	1/1:2,15:18:39.12:550,39,0	1/1:1,10:12:21.07:314,21,0
chr10	15329242	.	CTGTA	C	9821.86	PASS	AB=0.875;AC=32;AF=0.571;AN=56;BaseQRankSum=10.523;DP=606;FS=17.299;HRun=0;HaplotypeScore=106.5158;InbreedingCoeff=0.7419;MQ=69.53;MQ0=4;MQRankSum=0.350;QD=23.90;ReadPosRankSum=1.231;VQSLOD=3.0029;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:78.25:0,78,1732	1/1:4,7:11:21.07:340,21,0	0/0:18,0:17:21.06:0,21,352	0/0:22,0:19:18.06:0,18,389	1/1:9,20:29:48.16:781,48,0	1/1:9,13:22:27.09:439,27,0	1/1:3,8:11:15.05:244,15,0	1/1:20,23:43:66.16:967,66,0	1/1:4,18:23:48.16:760,48,0	1/1:8,20:28:60.17:943,60,0	1/1:9,11:20:30.10:488,30,0	0/0:15,0:15:30.10:0,30,691	0/0:18,0:18:39.13:0,39,943	0/0:21,0:21:39.13:0,39,922	0/0:18,0:18:27.09:0,27,655	0/1:15,1:16:12.69:13,0,739	1/1:6,14:21:39.13:614,39,0	0/1:22,2:24:43.46:43,0,977	1/1:13,16:27:46.86:728,47,0	0/1:11,15:26:27.69:638,0,28	1/1:6,21:28:48.16:781,48,0	0/1:21,0:21:0.61:1,0,974	0/0:15,0:15:33.11:0,33,774	0/0:17,0:17:39.13:0,39,944	0/0:18,0:18:51.16:0,51,1190	1/1:3,17:20:51.15:800,51,0	1/1:6,23:29:57.19:900,57,0	1/1:3,7:10:21.07:342,21,0
chr10	15331199	.	ACCCTACGTCGGGCTCCTGGGG	A	11244.86	PASS	AC=34;AF=0.654;AN=52;BaseQRankSum=10.693;DP=457;FS=3.580;HRun=0;HaplotypeScore=245.9583;InbreedingCoeff=0.8229;MQ=62.75;MQ0=1;MQRankSum=-9.571;QD=38.64;ReadPosRankSum=1.350;VQSLOD=3.6317;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:30.09:0,30,2273	1/1:4,3:7:3.01:168,3,0	0/0:8,0:7:6.02:0,6,204	./.	1/1:11,8:19:9.03:476,9,0	1/1:7,8:15:18.06:963,18,0	1/1:12,10:22:24.08:1341,24,0	1/1:19,0:19:6.01:77,6,0	1/1:11,12:23:33.11:1847,33,0	1/1:9,4:13:12.04:554,12,0	1/1:10,2:12:6.02:289,6,0	0/0:18,0:18:42.14:0,42,3350	0/0:12,0:12:27.09:0,27,2151	0/0:19,0:19:48.16:0,48,4229	1/1:10,4:14:12.04:672,12,0	1/1:7,9:16:24.08:1343,24,0	1/1:17,12:29:16.09:977,16,0	1/1:17,4:21:4.25:330,4,0	./.	1/1:8,3:11:9.03:477,9,0	1/1:33,5:37:9.03:449,9,0	0/0:11,0:11:24.08:0,24,1816	0/0:10,0:10:24.08:0,24,1961	0/0:25,0:25:57.20:0,57,5255	0/0:12,0:12:27.09:0,27,2256	1/1:9,5:14:12.04:564,12,0	1/1:8,6:14:12.04:672,12,0	1/1:4,0:4:3.01:45,3,0
chr10	15332926	.	CT	C	6701.87	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=17.908;DP=690;FS=1.392;HRun=3;HaplotypeScore=80.2448;InbreedingCoeff=0.9997;MQ=91.34;MQ0=0;MQRankSum=-1.721;QD=32.85;ReadPosRankSum=1.547;VQSLOD=5.2815;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,150,2102	0/0:11,0:11:27.08:0,27,370	0/0:33,0:33:72.21:0,72,1158	0/0:22,0:22:42.11:0,42,563	1/1:3,23:26:59.96:656,60,0	1/1:0,24:24:69.22:855,69,0	1/1:0,14:14:42.13:520,42,0	0/0:31,0:31:84.24:0,84,1131	0/0:32,0:32:93.30:0,93,1317	0/0:25,0:25:66.22:0,66,935	0/0:16,0:16:48.15:0,48,673	0/0:25,0:25:72.23:0,72,1018	0/0:19,0:19:57.18:0,57,801	0/0:27,0:27:78.24:0,78,1087	1/1:0,27:27:75.24:929,75,0	1/1:2,29:31:84.26:1041,84,0	0/0:48,0:48:99:0,141,1992	1/1:0,19:19:54.15:655,54,0	1/1:1,21:22:59.85:726,60,0	1/1:0,20:20:54.13:652,54,0	1/1:1,20:21:54.17:669,54,0	0/0:28,0:28:84.27:0,84,1189	0/0:11,0:11:33.11:0,33,474	0/0:29,0:29:84.25:0,84,1173	0/0:16,0:16:48.15:0,48,673	0/0:30,0:30:87.28:0,87,1236	0/0:19,0:18:57.19:0,57,818	0/0:10,0:10:30.10:0,30,432
chr10	15334069	.	G	GTACACAGACA	14294.50	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-9.023;DP=404;FS=14.025;HRun=0;HaplotypeScore=107.3009;InbreedingCoeff=0.9658;MQ=79.62;MQ0=0;MQRankSum=-12.739;QD=98.58;ReadPosRankSum=0.025;VQSLOD=4.5408;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,99,3006	1/1:0,5:5:12.04:630,12,0	0/0:17,0:16:45.15:0,45,1296	0/0:22,0:21:51.52:0,52,1333	0/0:17,0:17:51.18:0,51,1639	0/0:25,0:25:75.22:0,75,2220	0/0:10,0:10:30.10:0,30,928	1/1:17,11:31:78.24:2782,78,0	1/1:2,10:12:12.04:629,12,0	1/1:1,13:14:42.14:2046,42,0	1/1:3,13:16:27.09:1405,27,0	0/0:5,0:5:15.05:0,15,435	0/0:10,0:10:27.09:0,27,881	0/0:4,0:4:12.04:0,12,370	0/0:7,0:7:21.07:0,21,664	0/0:7,0:7:21.07:0,21,681	1/1:3,12:18:30.10:1475,30,0	0/0:12,0:12:36.12:0,36,1106	0/0:11,0:11:30.10:0,30,952	0/0:6,0:6:12.02:0,12,318	0/0:31,0:31:87.30:0,87,2689	0/0:3,0:3:9.03:0,9,294	0/0:7,0:7:21.07:0,21,685	0/0:11,0:11:33.10:0,33,949	0/0:19,0:19:57.20:0,57,1809	1/1:4,16:21:63.22:2981,63,0	1/1:4,8:15:21.07:1086,21,0	1/1:2,8:10:24.08:1260,24,0
chr10	15334538	.	TAC	T	853.26	PASS	AB=0.956;AC=12;AF=0.214;AN=56;BaseQRankSum=1.204;DP=531;FS=9.459;HRun=0;HaplotypeScore=118.3923;InbreedingCoeff=0.4572;MQ=63.19;MQ0=10;MQRankSum=1.623;QD=6.23;ReadPosRankSum=1.696;VQSLOD=2.8741;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,1:41:52.20:0,52,1111	0/0:8,0:7:8.87:0,9,80	0/1:20,0:14:5.86:6,0,61	0/0:26,0:16:15.04:0,15,214	0/0:7,0:12:8.95:0,9,77	0/0:7,0:22:27:0,27,254	0/0:9,0:22:33:0,33,305	0/0:34,0:31:42.44:0,42,474	0/0:26,0:25:4.53:0,5,52	0/0:14,0:13:29.92:0,30,269	1/1:8,0:8:0.47:1,0,0	0/0:15,0:15:39.08:0,39,536	0/0:17,0:17:42.09:0,42,609	0/1:17,1:18:1.91:2,0,415	0/0:7,0:16:15:0,15,131	0/0:11,0:11:6.01:0,6,65	0/0:30,0:29:6.77:0,7,178	0/0:9,0:13:11.74:0,12,90	1/1:10,4:13:12.04:140,12,0	1/1:7,14:22:38.85:411,39,0	1/1:15,15:29:36.05:396,36,0	0/1:12,2:14:37.12:37,0,356	0/1:11,0:10:10.93:11,0,291	0/0:31,1:33:26.08:0,26,955	0/0:10,0:10:14.14:0,14,233	0/0:20,0:19:43.21:0,43,438	0/0:18,0:17:26.49:0,26,197	0/0:5,0:5:4.83:0,5,44
chr10	15334576	.	TAC	T	3787.69	PASS	AB=0.781;AC=18;AF=0.321;AN=56;BaseQRankSum=8.832;DP=699;FS=2.961;HRun=0;HaplotypeScore=155.4056;InbreedingCoeff=0.8365;MQ=61.02;MQ0=9;MQRankSum=-3.026;QD=17.54;ReadPosRankSum=-2.124;VQSLOD=3.1297;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:39:92.74:0,93,1354	1/1:5,5:11:12.02:147,12,0	0/0:51,1:28:10.97:0,11,469	0/0:60,0:28:20.06:0,20,459	0/0:17,0:17:39.07:0,39,604	0/0:26,1:27:11.70:0,12,709	0/0:24,0:24:54.18:0,54,871	1/1:13,17:30:47.73:574,48,0	1/1:8,17:25:38.04:446,38,0	1/1:9,20:28:57.05:696,57,0	0/1:6,10:16:24.22:233,0,24	0/0:24,0:24:60.20:0,60,972	0/0:21,0:21:57.19:0,57,917	0/0:24,0:24:29.56:0,30,926	0/1:17,1:18:3.53:4,0,449	0/0:7,1:8:18.06:0,18,286	1/1:11,20:31:47.80:586,48,0	0/0:16,0:16:33.07:0,33,491	0/0:4,0:13:33.01:0,33,313	0/0:10,0:27:42:0,42,420	0/0:16,0:46:74.72:0,75,762	0/0:17,0:17:45.14:0,45,701	0/0:20,0:19:54.17:0,54,851	0/0:38,0:38:90.30:0,90,1459	0/0:8,0:8:21.07:0,21,338	1/1:13,18:30:54.07:628,54,0	1/1:9,9:17:27.07:329,27,0	1/1:2,4:6:12.04:147,12,0
chr10	15335456	.	AGCGTTTCG	A	3725.91	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=11.333;DP=468;FS=10.115;HRun=0;HaplotypeScore=138.6427;InbreedingCoeff=0.9313;MQ=73.41;MQ0=1;MQRankSum=-10.448;QD=73.06;ReadPosRankSum=-1.687;VQSLOD=3.1733;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,157,6694	1/1:1,1:2:6.02:139,6,0	0/0:22,0:18:22.18:0,22,1687	0/0:20,0:19:21.04:0,21,1460	0/0:25,0:25:75.26:0,75,3208	0/0:19,0:19:57.20:0,57,2470	0/0:21,0:21:60.19:0,60,2541	1/1:2,10:11:33.06:865,33,0	1/1:0,8:8:24.08:705,24,0	1/1:2,5:7:21.04:467,21,0	1/1:1,3:4:9.03:271,9,0	0/0:19,0:19:57.20:0,57,2469	0/0:13,0:13:36.10:0,36,1555	0/0:13,0:13:39.13:0,39,1610	0/0:25,0:25:75.26:0,75,3250	0/0:24,0:24:69.22:0,69,2918	1/1:1,8:9:25.31:617,25,0	0/0:27,0:27:81.23:0,81,3308	0/0:21,0:21:63.22:0,63,2723	0/0:15,0:15:45.15:0,45,1790	0/0:19,0:19:57.20:0,57,2455	0/0:19,0:19:54.17:0,54,2226	0/0:11,0:11:33.10:0,33,1319	0/0:30,0:30:90.27:0,90,3698	0/0:21,0:21:63.22:0,63,2709	1/1:0,3:3:9.03:198,9,0	1/1:1,4:5:14.54:374,15,0	1/1:0,1:1:3.01:91,3,0
chr10	15335467	.	AAAAGCG	A	1401.72	PASS	AB=0.974;AC=11;AF=0.196;AN=56;BaseQRankSum=11.198;DP=552;FS=0.536;HRun=0;HaplotypeScore=169.1536;InbreedingCoeff=0.1323;MQ=70.36;MQ0=1;MQRankSum=-9.995;QD=12.08;ReadPosRankSum=-0.934;VQSLOD=2.5144;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:56:99:0,157,4877	0/1:5,0:5:24.10:38,0,24	0/0:17,0:16:31.35:0,31,1119	0/0:22,0:22:3.50:0,4,1095	0/0:25,0:25:75.26:0,75,2406	0/0:22,0:21:66.23:0,66,2136	0/0:19,0:19:51.17:0,51,1618	0/1:26,1:25:79.77:365,0,80	1/1:14,0:14:16.24:322,16,0	0/1:15,1:16:86.30:165,0,86	0/1:9,1:10:13.83:171,0,14	0/0:20,0:20:60.21:0,60,1880	0/0:15,0:15:45.15:0,45,1394	0/0:13,0:13:39.13:0,39,1245	0/0:26,0:26:78.27:0,78,2499	0/0:26,0:26:78.27:0,78,2510	1/1:12,1:13:1.26:265,1,0	0/0:33,0:33:93.32:0,93,3103	0/0:22,0:22:66.22:0,66,2049	0/0:12,0:12:36.12:0,36,1161	0/0:22,0:22:66.23:0,66,2118	0/0:20,0:20:57.17:0,57,1727	0/0:12,0:12:36.12:0,36,1210	0/0:31,0:31:93.29:0,93,2956	0/0:22,0:22:63.20:0,63,2009	0/1:15,0:15:30.11:30,0,89	0/1:12,0:12:16.65:158,0,17	0/1:4,0:4:13.42:38,0,13
chr10	15335468	.	AAAGCG	A	2275.50	PASS	AB=0.917;AC=18;AF=0.321;AN=56;BaseQRankSum=14.632;DP=556;FS=39.769;HRun=0;HaplotypeScore=155.6919;InbreedingCoeff=0.8590;MQ=70.29;MQ0=1;MQRankSum=-14.098;QD=16.49;ReadPosRankSum=-3.593;VQSLOD=1.2485;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:59,0:59:99:0,169,4557	0/1:4,1:5:1.55:55,0,2	0/0:18,0:16:31.37:0,31,991	0/1:22,0:22:3.98:4,0,975	0/0:25,0:25:75.26:0,75,2106	0/0:22,0:21:66.23:0,66,1880	0/0:17,0:17:51.18:0,51,1432	1/1:24,3:25:31.26:545,31,0	1/1:13,1:14:39.28:485,39,0	1/1:14,2:16:12.75:273,13,0	1/1:8,2:10:20.22:258,20,0	0/0:21,0:21:63.22:0,63,1719	0/0:16,0:16:48.16:0,48,1293	0/0:13,0:13:39.13:0,39,1094	0/0:27,0:27:81.28:0,81,2264	0/0:26,0:26:78.27:0,78,2205	1/1:8,5:13:30.66:379,31,0	0/0:33,0:33:93.32:0,93,2708	0/0:22,0:22:66.22:0,66,1798	0/0:12,0:12:36.12:0,36,1022	0/0:22,0:22:66.23:0,66,1870	0/0:20,0:20:57.17:0,57,1520	0/0:12,0:12:36.12:0,36,1056	0/0:31,0:31:93.29:0,93,2601	0/0:22,0:22:63.20:0,63,1764	1/1:14,1:15:5.65:121,6,0	1/1:12,0:12:24.36:278,24,0	1/1:4,0:4:8.45:77,8,0
chr10	15335469	.	AAGCG	A	3227.04	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=15.883;DP=558;FS=37.078;HRun=0;HaplotypeScore=140.6936;InbreedingCoeff=0.9043;MQ=70.42;MQ0=1;MQRankSum=-14.673;QD=23.56;ReadPosRankSum=-4.575;VQSLOD=1.0246;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:58:99:0,169,4009	1/1:5,0:5:7.79:80,8,0	0/0:17,0:16:27.76:0,28,846	0/1:21,0:21:18.23:18,0,853	0/0:25,0:25:75.26:0,75,1831	0/0:22,0:21:66.23:0,66,1629	0/0:17,0:17:51.18:0,51,1249	1/1:25,2:25:65.31:753,65,0	1/1:8,6:14:41.67:561,42,0	1/1:14,2:16:42.79:438,43,0	1/1:10,0:10:26.83:339,27,0	0/0:22,0:22:66.23:0,66,1587	0/0:16,0:16:48.16:0,48,1140	0/0:13,0:13:39.13:0,39,959	0/0:27,0:27:81.28:0,81,1989	0/0:26,0:26:78.27:0,78,1921	1/1:11,2:13:35.41:443,35,0	0/0:34,0:34:96.33:0,96,2401	0/0:23,0:23:69.23:0,69,1634	0/0:12,0:12:36.12:0,36,887	0/0:22,0:22:66.23:0,66,1630	0/0:20,0:20:57.17:0,57,1315	0/0:13,0:13:39.13:0,39,970	0/0:31,0:31:93.29:0,93,2260	0/0:22,0:22:66.21:0,66,1592	1/1:14,1:15:35.97:305,36,0	1/1:10,2:12:32.64:382,33,0	1/1:3,1:4:11.87:120,12,0
chr10	15335470	.	AGCG	A	4311.82	PASS	AB=0.913;AC=19;AF=0.339;AN=56;BaseQRankSum=15.746;DP=557;FS=32.906;HRun=0;HaplotypeScore=126.0246;InbreedingCoeff=0.9070;MQ=70.44;MQ0=1;MQRankSum=-14.777;QD=31.47;ReadPosRankSum=-4.140;VQSLOD=2.6807;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:57:99:0,169,3545	1/1:3,2:5:8.98:106,9,0	0/0:18,0:16:27.72:0,28,729	0/1:19,1:21:18.34:18,0,749	0/0:25,0:25:75.26:0,75,1587	0/0:22,0:21:66.23:0,66,1419	0/0:17,0:17:51.18:0,51,1085	1/1:10,17:25:70.19:949,70,0	1/1:7,7:14:35.85:585,36,0	1/1:9,7:16:47.88:600,48,0	1/1:3,7:10:27.09:401,27,0	0/0:22,0:22:66.23:0,66,1419	0/0:16,0:16:48.16:0,48,1012	0/0:13,0:13:39.13:0,39,837	0/0:28,0:28:84.29:0,84,1811	0/0:26,0:26:78.27:0,78,1668	1/1:8,5:13:35.83:484,36,0	0/0:34,0:34:96.33:0,96,2074	0/0:23,0:23:69.23:0,69,1444	0/0:12,0:12:36.12:0,36,775	0/0:22,0:22:66.23:0,66,1422	0/0:19,0:19:57.18:0,57,1149	0/0:13,0:13:39.13:0,39,841	0/0:31,0:31:93.29:0,93,1962	0/0:22,0:22:66.21:0,66,1384	1/1:3,12:15:42.09:526,42,0	1/1:4,8:12:33.10:477,33,0	1/1:2,2:4:12.04:166,12,0
chr10	15335482	.	A	AGT	5084.80	PASS	AB=0.696;AC=16;AF=0.286;AN=56;BaseQRankSum=16.395;DP=592;FS=26.346;HRun=0;HaplotypeScore=126.6151;InbreedingCoeff=0.8379;MQ=70.57;MQ0=0;MQRankSum=-15.252;QD=31.20;ReadPosRankSum=-3.197;VQSLOD=3.4311;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,160,2551	1/1:1,5:7:12.03:185,12,0	0/0:16,0:16:39.12:0,39,578	0/0:19,0:19:39.50:0,39,602	0/0:23,0:23:66.23:0,66,1076	0/0:21,0:20:60.20:0,60,978	0/0:15,0:15:45.14:0,45,705	1/1:13,26:37:80.53:1472,81,0	0/1:13,7:20:19.69:361,0,20	1/1:6,15:21:59.78:872,60,0	1/1:4,9:13:33.09:423,33,0	0/0:20,0:20:60.18:0,60,925	0/0:15,0:15:45.11:0,45,658	0/0:14,0:14:42.14:0,42,679	0/0:25,0:25:75.26:0,75,1219	0/0:27,0:27:81.27:0,81,1293	1/1:10,9:19:35.10:373,35,0	0/0:36,0:36:99:0,105,1625	0/0:23,0:23:69.23:0,69,1079	0/0:13,0:13:39.11:0,39,588	0/0:23,0:23:69.22:0,69,1094	0/0:21,0:21:63.20:0,63,980	0/0:14,0:14:42.14:0,42,685	0/0:29,0:29:81.28:0,81,1308	0/0:22,0:22:66.23:0,66,1075	1/1:6,16:22:50.99:813,51,0	0/1:7,8:15:5.53:389,0,6	1/1:4,2:7:14.99:198,15,0
chr10	15335951	.	C	CT	6303.61	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=7.808;DP=593;FS=31.898;HRun=1;HaplotypeScore=65.6762;InbreedingCoeff=0.9926;MQ=72.01;MQ0=0;MQRankSum=-1.149;QD=40.67;ReadPosRankSum=-0.285;VQSLOD=2.4711;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:81.26:0,81,1050	1/1:0,10:10:30.10:450,30,0	0/0:25,0:25:71.81:0,72,887	0/0:20,0:20:57.18:0,57,724	0/0:22,0:22:66.20:0,66,840	0/0:23,0:23:66.21:0,66,848	0/0:27,0:27:81.23:0,81,1012	1/1:0,32:31:93.29:1352,93,0	1/1:1,8:9:17.85:270,18,0	1/1:0,22:22:63.21:944,63,0	1/1:0,6:6:18.06:269,18,0	0/0:29,0:28:78.25:0,78,1012	0/0:22,0:22:60.19:0,60,767	0/0:22,0:22:66.21:0,66,854	0/0:33,0:33:99:0,99,1285	0/0:24,0:24:66.20:0,66,838	1/1:1,19:20:12.22:680,12,0	0/0:18,0:18:54.17:0,54,691	0/0:15,0:15:42.13:0,42,533	0/0:26,0:26:78.23:0,78,985	0/0:35,0:35:99:0,102,1310	0/0:16,0:16:45.13:0,45,570	0/0:13,0:13:39.13:0,39,506	0/0:24,0:24:72.23:0,72,930	0/0:15,0:15:42.12:0,42,530	1/1:0,29:29:87.29:1304,87,0	1/1:0,17:17:39.13:584,39,0	1/1:0,10:10:30.10:450,30,0
chr10	15336136	.	TC	T	1175.61	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=7.053;DP=506;FS=4.233;HRun=4;HaplotypeScore=76.3291;InbreedingCoeff=0.9628;MQ=61.29;MQ0=20;MQRankSum=-0.659;QD=7.73;ReadPosRankSum=-2.261;VQSLOD=-0.3445;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:74.02:0,74,621	1/1:11,0:11:19.29:83,19,0	0/0:45,0:11:20.32:0,20,158	0/0:33,0:13:9.01:0,9,84	0/0:21,0:21:44.89:0,45,380	0/0:20,0:18:35.91:0,36,300	0/0:18,0:18:44.52:0,45,383	1/1:16,1:16:27.20:149,27,0	1/1:11,1:12:24.37:131,24,0	1/1:14,3:18:36:222,36,0	1/1:15,1:16:23.25:111,23,0	0/0:14,0:13:30.02:0,30,287	0/0:12,0:12:24.91:0,25,231	0/0:8,0:8:16.82:0,17,172	0/0:16,0:16:24.80:0,25,181	0/0:14,0:14:21:0,21,190	1/1:22,1:24:28.34:162,28,0	0/0:19,0:19:39.40:0,39,335	0/0:17,0:15:26.86:0,27,214	0/0:17,0:17:35.94:0,36,273	0/0:6,0:6:5.03:0,5,42	0/0:14,0:14:30.22:0,30,240	0/0:12,0:11:14.99:0,15,148	0/0:18,0:18:44.62:0,45,379	0/0:12,0:12:24.01:0,24,226	1/1:19,0:20:40.49:187,40,0	1/1:16,0:16:38.37:188,38,0	1/1:16,1:17:29.85:155,30,0
chr10	15336167	.	TTG	T	762.55	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=3.350;DP=444;FS=0.888;HRun=0;HaplotypeScore=79.0779;InbreedingCoeff=0.9785;MQ=64.90;MQ0=8;MQRankSum=-2.473;QD=27.23;ReadPosRankSum=1.137;VQSLOD=4.8433;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:93.30:0,93,1817	0/0:8,0:8:18.03:0,18,326	0/0:32,0:20:51.96:0,52,755	0/0:30,0:10:25.90:0,26,336	0/0:14,0:14:39.13:0,39,773	0/0:17,0:17:39.13:0,39,743	0/0:21,0:21:63.22:0,63,1278	0/0:18,0:18:51.14:0,51,975	0/0:12,0:12:36.11:0,36,695	0/0:19,0:19:57.14:0,57,1066	0/0:12,0:12:33.11:0,33,654	0/0:13,0:13:36.12:0,36,731	0/0:13,0:13:30.10:0,30,609	0/0:9,0:8:21.07:0,21,408	0/0:16,0:16:33.10:0,33,575	0/0:13,0:13:18.05:0,18,306	0/0:16,0:16:39.13:0,39,789	0/0:18,0:18:51.17:0,51,941	1/1:4,9:11:27.08:387,27,0	1/1:2,8:10:21.07:301,21,0	1/1:0,5:5:15.05:215,15,0	0/0:12,0:12:35.94:0,36,649	0/0:5,0:5:15.05:0,15,304	0/0:15,0:15:42.14:0,42,837	0/0:13,0:13:36.11:0,36,696	0/0:22,0:22:63.22:0,63,1276	0/0:24,0:24:63.20:0,63,1243	0/0:11,0:11:30.10:0,30,609
chr10	15336584	.	TCACA	T	2749.37	PASS	AB=1.000;AC=23;AF=0.426;AN=54;BaseQRankSum=-6.873;DP=422;FS=8.729;HRun=0;HaplotypeScore=110.0880;InbreedingCoeff=0.7692;MQ=66.96;MQ0=19;MQRankSum=1.342;QD=16.56;ReadPosRankSum=1.277;VQSLOD=2.9744;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:23:24.38:0,24,360	1/1:10,0:11:15.04:200,15,0	./.	0/0:21,0:9:8.38:0,8,81	0/0:13,0:11:9.01:0,9,118	0/0:20,0:20:27.09:0,27,446	0/0:21,0:19:17.89:0,18,273	1/1:12,4:17:14.09:219,14,0	1/1:10,0:10:21.04:279,21,0	1/1:2,12:12:36.09:508,36,0	1/1:5,4:8:2.97:20,3,0	0/0:12,0:11:21.04:0,21,300	0/0:13,0:12:15.52:0,16,223	0/0:15,0:14:6.02:0,6,115	0/0:12,0:11:8.87:0,9,150	0/0:4,0:4:6.02:0,6,107	1/1:24,0:24:38.65:463,39,0	0/0:12,0:11:9.03:0,9,147	1/1:6,2:8:6.02:92,6,0	1/1:3,4:7:2.94:18,3,0	0/1:20,0:20:22.86:205,0,23	0/0:16,0:16:18.06:0,18,303	0/0:11,0:11:15.03:0,15,218	0/0:19,0:17:11.93:0,12,192	0/0:12,0:12:18.05:0,18,290	1/1:19,0:20:33.04:469,33,0	1/1:15,0:14:12.03:163,12,0	1/1:10,0:9:21.07:316,21,0
chr10	15336652	.	AGT	A	1129.20	PASS	AB=1.000;AC=46;AF=0.920;AN=50;BaseQRankSum=-0.596;DP=249;FS=8.634;HRun=0;HaplotypeScore=50.1736;InbreedingCoeff=0.1121;MQ=35.18;MQ0=39;MQRankSum=0.865;QD=4.91;ReadPosRankSum=-0.101;VQSLOD=1.0512;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:19:5.06:41,5,0	1/1:3,0:1:1.55:4,2,0	./.	./.	1/1:8,2:5:3:25,3,0	1/1:15,0:15:14.45:103,14,0	1/1:17,0:17:14.99:129,15,0	1/1:4,0:2:5.95:42,6,0	1/1:6,0:6:2.96:19,3,0	1/1:8,0:6:13.76:99,14,0	1/1:7,0:6:0.89:2,1,0	1/1:11,0:9:5.83:37,6,0	1/1:9,0:6:11:66,11,0	1/1:6,0:4:2.50:9,2,0	0/0:4,6:9:3.06:0,3,7	0/1:9,0:7:15.48:15,0,19	1/1:15,0:14:17.57:116,18,0	0/1:7,0:6:16.03:51,0,16	1/1:5,0:5:14.90:109,15,0	1/1:5,0:4:7.24:53,7,0	1/1:13,0:8:3:25,3,0	./.	1/1:3,0:2:2.96:19,3,0	1/1:21,0:15:8.89:60,9,0	1/1:4,0:4:4.97:18,5,0	1/1:10,0:7:13.48:93,13,0	1/1:10,0:9:2.52:25,3,0	1/1:8,0:4:10.98:72,11,0
chr10	15336654	.	TGA	T	78.55	PASS	AB=0.933;AC=20;AF=0.500;AN=40;BaseQRankSum=0.919;DP=234;FS=6.532;HRun=0;HaplotypeScore=46.6432;InbreedingCoeff=0.3374;MQ=35.04;MQ0=38;MQRankSum=2.021;QD=0.68;ReadPosRankSum=1.531;VQSLOD=0.0199;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	1/1:9,0:4:0.47:1,0,0	0/0:13,0:13:0:0,0,0	1/1:15,0:15:2.44:6,2,0	0/0:5,0:3:0.47:0,0,1	0/1:5,0:5:0.13:0,0,0	0/0:6,0:4:0.47:0,0,1	0/1:6,0:5:0:0,0,0	0/1:7,4:9:0:0,0,0	1/1:8,0:5:3.85:35,4,0	1/1:6,0:4:3.01:33,3,0	0/0:10,0:9:1.25:0,1,3	1/1:10,0:8:2.74:12,3,0	1/1:13,0:12:0.04:0,0,0	0/0:8,0:7:2.25:0,2,11	0/0:5,0:5:0.47:0,0,1	0/0:5,0:4:0:0,0,0	./.	./.	./.	1/1:18,0:12:2.60:10,3,0	1/1:5,0:5:6.02:66,6,0	./.	0/0:8,0:7:2.86:0,3,25	0/1:9,0:4:0.01:0,0,0
chr10	15337043	.	G	GAC	9930.27	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=16.096;DP=630;FS=6.121;HRun=0;HaplotypeScore=139.8459;InbreedingCoeff=1.0000;MQ=79.52;MQ0=0;MQRankSum=-8.912;QD=49.65;ReadPosRankSum=0.745;VQSLOD=5.1148;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,102,1535	1/1:0,14:15:45.15:862,45,0	0/0:18,0:18:41.32:0,41,646	0/0:18,0:18:51.17:0,51,757	0/0:33,0:33:99:0,99,1493	0/0:22,0:22:60.17:0,60,866	0/0:19,0:19:57.18:0,57,851	1/1:4,24:28:75.22:1345,75,0	1/1:2,19:23:57.20:1097,57,0	1/1:1,23:25:72.21:1316,72,0	1/1:2,18:20:51.17:982,51,0	0/0:29,0:29:84.26:0,84,1244	0/0:19,0:19:57.16:0,57,829	0/0:28,0:28:84.29:0,84,1283	0/0:32,0:32:93.27:0,93,1359	0/0:15,0:15:42.14:0,42,643	1/1:0,23:24:54.19:1040,54,0	0/0:15,0:15:45.11:0,45,644	0/0:15,0:15:45.15:0,45,687	0/0:26,0:26:75.24:0,75,1126	0/0:24,0:24:72.24:0,72,1099	0/0:23,0:23:60.17:0,60,875	0/0:17,0:17:48.15:0,48,713	0/0:26,0:25:75.22:0,75,1103	0/0:17,0:17:51.16:0,51,759	1/1:0,24:25:72.22:1300,72,0	1/1:1,19:19:57.14:1060,57,0	1/1:3,17:19:48.16:926,48,0
chr10	15337613	.	TTG	T	2698.72	PASS	AB=0.913;AC=27;AF=0.482;AN=56;BaseQRankSum=-0.562;DP=560;FS=10.924;HRun=0;HaplotypeScore=126.9946;InbreedingCoeff=0.4448;MQ=67.23;MQ0=9;MQRankSum=4.686;QD=7.67;ReadPosRankSum=1.884;VQSLOD=2.9723;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:15,21:38:38.95:430,39,0	0/0:13,0:13:10.32:0,10,124	0/0:30,0:21:9.44:0,9,90	0/0:30,0:17:6.46:0,6,58	0/0:22,0:22:6.75:0,7,41	0/1:18,0:18:8.87:9,0,58	0/1:20,0:20:3.34:3,0,112	0/1:32,1:33:43.41:43,0,570	0/0:15,0:14:8.67:0,9,96	0/0:16,0:15:12.54:0,13,97	0/0:17,0:17:15:0,15,168	1/1:7,11:17:22.31:246,22,0	1/1:3,11:14:21.06:243,21,0	1/1:6,10:17:20.93:242,21,0	0/1:12,0:12:8.74:9,0,17	1/1:12,0:12:14.46:67,14,0	0/1:21,0:21:6.31:6,0,242	0/0:14,0:14:17.58:0,18,158	0/1:10,1:12:23.69:24,0,25	1/1:10,9:22:29.89:195,30,0	1/1:15,2:16:2.95:19,3,0	0/1:3,8:13:21.27:166,0,21	1/1:11,7:20:14.71:132,15,0	1/1:8,35:44:65.75:721,66,0	1/1:6,11:19:32.76:340,33,0	0/0:24,0:24:38.81:0,39,487	0/0:19,0:19:24.37:0,24,303	0/0:8,0:8:2.94:0,3,76
chr10	15337628	.	T	TGTGTGTGTGTGCGTGTGTGC	3184.19	PASS	AB=0.968;AC=16;AF=0.286;AN=56;BaseQRankSum=-2.682;DP=574;FS=3.116;HRun=0;HaplotypeScore=288.4431;InbreedingCoeff=0.1714;MQ=53.03;MQ0=16;MQRankSum=-4.176;QD=12.34;ReadPosRankSum=-3.161;VQSLOD=1.2458;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:72.16:0,72,1979	0/1:13,0:13:51.67:199,0,52	0/0:28,0:13:17.19:0,17,187	0/1:30,0:10:0.06:0,0,53	0/0:24,0:24:14.33:0,14,215	0/1:16,0:16:5.08:5,0,183	0/0:21,0:21:18.47:0,18,308	0/1:40,0:39:99:988,0,145	1/1:17,0:16:17.95:368,18,0	1/1:16,0:15:22.85:462,23,0	0/1:17,0:17:75.16:75,0,99	0/0:17,0:15:29.96:0,30,863	0/0:13,0:13:24.08:0,24,920	0/0:18,0:18:24.06:0,24,794	0/0:12,0:12:10.01:0,10,242	0/0:11,0:11:17.15:0,17,431	0/1:21,0:21:99:229,0,215	0/1:16,0:16:2.35:2,0,375	0/0:6,0:6:9.33:0,9,132	0/0:29,0:29:22.93:0,23,213	0/1:21,0:18:2.86:3,0,188	0/0:16,0:16:30.07:0,30,840	0/0:16,0:16:21.06:0,21,648	0/0:44,0:43:78.21:0,78,2904	0/0:17,0:17:39.12:0,39,1176	0/1:24,0:24:99:730,0,161	0/1:12,7:23:64.11:64,0,138	1/1:4,0:4:9.02:223,9,0
chr10	15337632	.	TGTGTGTGTGC	T	1616.54	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=4.963;DP=563;FS=9.392;HRun=0;HaplotypeScore=189.5553;InbreedingCoeff=0.5809;MQ=51.05;MQ0=15;MQRankSum=-5.243;QD=11.46;ReadPosRankSum=0.151;VQSLOD=1.7616;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:80.94:0,81,2001	0/0:12,0:12:0.15:0,0,293	0/0:25,0:8:10.99:0,11,277	0/1:32,0:9:16.81:17,0,102	0/0:22,0:22:12.03:0,12,291	0/1:16,0:16:38.28:38,0,180	0/0:20,0:20:17.93:0,18,417	0/0:38,0:37:57.78:0,58,1729	0/0:17,0:16:21.07:0,21,516	0/0:17,0:16:27.68:0,28,534	0/0:17,0:17:17.25:0,17,233	0/0:18,0:16:33:0,33,763	0/0:14,0:14:27.01:0,27,763	0/0:15,0:15:24.03:0,24,683	1/1:5,6:11:9.03:195,9,0	1/1:1,10:11:21.07:550,21,0	0/0:19,0:19:33.29:0,33,382	0/1:15,0:15:9.61:48,0,10	1/1:9,0:9:5.68:201,6,0	1/1:27,0:27:9.47:685,9,0	1/1:20,0:17:5.89:50,6,0	0/0:15,0:15:33.05:0,33,715	0/0:15,0:15:24.03:0,24,522	0/0:45,0:44:81.20:0,81,2224	0/0:16,0:16:38.92:0,39,1006	0/0:23,0:23:52.01:0,52,1054	0/0:21,0:21:20.96:0,21,469	0/0:8,0:8:20.80:0,21,236
chr10	15337640	.	TGC	T	1369.68	PASS	AB=0.977;AC=26;AF=0.464;AN=56;BaseQRankSum=6.131;DP=553;FS=0.000;HRun=0;HaplotypeScore=129.9853;InbreedingCoeff=-0.0392;MQ=51.96;MQ0=13;MQRankSum=1.999;QD=3.42;ReadPosRankSum=7.228;VQSLOD=1.2734;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:41,0:41:88.93:89,0,252	0/1:12,0:12:18.10:18,0,89	0/1:25,0:9:40.89:41,0,80	0/1:30,0:8:6.43:22,0,6	1/1:17,2:19:14.56:106,15,0	0/1:15,1:16:5.29:81,0,5	0/1:20,0:20:16.01:103,0,16	0/0:37,0:36:36.75:0,37,656	0/0:16,0:16:17.93:0,18,151	0/0:15,0:14:5.29:0,5,172	0/0:13,0:13:16.98:0,17,141	0/1:17,0:15:54.78:71,0,55	0/1:14,0:14:21.32:72,0,21	1/1:14,0:13:3.58:75,4,0	1/1:9,0:9:8.27:44,8,0	1/1:11,0:11:20.69:133,21,0	0/0:18,0:18:12.06:0,12,214	0/1:18,0:18:40.66:51,0,41	1/1:10,0:10:12.32:139,12,0	1/1:25,0:25:8.28:137,8,0	0/1:13,7:17:15.10:42,0,15	0/1:16,0:16:40.42:40,0,110	0/1:14,0:14:14.83:15,0,87	0/1:50,0:49:99:180,0,115	0/1:20,0:20:79.11:91,0,79	0/0:24,0:24:48.22:0,48,571	0/0:21,0:21:17.74:0,18,218	0/0:8,0:8:20.53:0,21,163
chr10	15337642	.	CGTGTGTGTGTGT	C	2106.77	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=5.534;DP=550;FS=8.925;HRun=0;HaplotypeScore=197.6288;InbreedingCoeff=0.8755;MQ=52.02;MQ0=13;MQRankSum=-4.091;QD=23.94;ReadPosRankSum=0.457;VQSLOD=1.8301;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:90.29:0,90,3259	0/0:12,0:12:0.85:0,1,479	0/0:25,0:9:6.46:0,6,450	0/0:30,0:8:14.34:0,14,192	0/0:18,0:18:15.05:0,15,509	0/0:14,0:14:5.10:0,5,228	0/0:20,0:20:24.05:0,24,765	0/0:36,0:35:83.82:0,84,2388	0/0:16,0:16:24.04:0,24,740	0/0:15,0:14:37.01:0,37,923	0/0:14,0:14:20.72:0,21,385	0/0:18,0:16:39.13:0,39,1328	0/0:14,0:14:30.10:0,30,1229	0/0:15,0:14:27.09:0,27,1131	1/1:6,1:7:9.03:219,9,0	1/1:11,0:11:21.05:375,21,0	0/0:18,0:18:39.45:0,39,654	1/1:16,0:16:17.59:180,18,0	1/1:8,2:10:23.51:386,24,0	1/1:2,22:25:30.10:1002,30,0	1/1:17,2:16:9.01:122,9,0	0/0:16,0:16:36.08:0,36,1149	0/0:13,0:14:27.09:0,27,929	0/0:51,0:50:99:0,99,3710	0/0:20,0:20:54.08:0,54,1811	0/0:24,0:24:69.23:0,69,1681	0/0:21,0:21:24.08:0,24,447	0/0:8,0:8:21.07:0,21,428
chr10	15337658	.	C	CGG	1512.86	PASS	AB=0.864;AC=19;AF=0.339;AN=56;BaseQRankSum=7.471;DP=537;FS=6.594;HRun=1;HaplotypeScore=128.7607;InbreedingCoeff=0.7063;MQ=62.23;MQ0=10;MQRankSum=-3.568;QD=8.95;ReadPosRankSum=-2.606;VQSLOD=-0.7152;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:90.23:0,90,1317	0/0:9,0:9:7.19:0,7,140	0/0:26,0:12:25.97:0,26,284	0/0:36,0:20:19.85:0,20,279	0/1:5,11:16:9.43:48,0,9	1/1:1,10:11:2.68:57,3,0	1/1:3,16:19:14.50:164,14,0	0/0:26,0:25:69.04:0,69,919	0/1:17,0:17:15.60:16,0,279	0/0:17,0:16:18.70:0,19,426	0/0:14,0:14:17.88:0,18,250	0/0:21,0:20:47.18:0,47,661	0/0:13,0:13:39.12:0,39,555	0/0:12,0:11:30.05:0,30,411	1/1:10,0:10:17.86:183,18,0	1/1:14,0:14:26.86:235,27,0	0/0:20,0:20:4.64:0,5,393	1/1:0,11:11:5.95:72,6,0	1/1:3,11:14:38.98:422,39,0	1/1:24,0:24:41.48:292,41,0	1/1:19,0:17:15.04:218,15,0	0/0:16,0:16:42.08:0,42,574	0/0:17,0:17:39.09:0,39,561	0/0:50,0:49:99:0,111,1650	0/0:18,0:18:54.01:0,54,777	0/0:27,0:27:45.99:0,46,803	0/1:14,0:14:3.21:3,0,154	0/0:11,0:11:24.41:0,24,306
chr10	15338020	.	A	AT	4744.10	PASS	AB=0.542;AC=17;AF=0.304;AN=56;BaseQRankSum=-3.166;DP=540;FS=6.408;HRun=10;HaplotypeScore=64.8829;InbreedingCoeff=0.9056;MQ=76.37;MQ0=0;MQRankSum=0.798;QD=23.96;ReadPosRankSum=-0.655;VQSLOD=5.3474;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:65.87:0,66,537	0/1:2,11:13:16.25:243,0,16	0/0:13,0:13:11.97:0,12,82	0/0:13,0:13:17.93:0,18,142	0/0:25,2:27:37.22:0,37,510	0/0:27,0:27:59.85:0,60,487	0/0:19,0:21:54.98:0,55,427	1/1:6,18:24:54.10:559,54,0	1/1:1,14:15:39.10:416,39,0	1/1:5,13:18:39.07:406,39,0	1/1:5,15:22:26.14:446,26,0	0/0:12,0:12:29.96:0,30,246	0/0:13,0:13:35.94:0,36,295	0/0:13,0:13:38.94:0,39,317	0/0:22,1:23:12.12:0,12,291	0/0:12,0:12:23.95:0,24,197	1/1:2,26:28:66.17:704,66,0	0/0:17,0:17:38.91:0,39,314	0/0:19,0:19:47.92:0,48,394	0/0:15,0:16:43.99:0,44,351	0/0:22,0:22:50.90:0,51,416	0/0:15,0:15:38.94:0,39,320	0/0:17,0:17:50.94:0,51,419	0/0:18,1:20:23.98:0,24,392	0/0:16,0:16:32.94:0,33,271	1/1:5,20:25:60.15:639,60,0	1/1:2,20:22:35.50:583,36,0	1/1:2,28:31:72.01:750,72,0
chr10	15338354	.	C	CCGTCCTCCTCGTCCTCCT	41328.22	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=3.248;DP=807;FS=4.156;HRun=0;HaplotypeScore=358.6322;InbreedingCoeff=0.9997;MQ=76.85;MQ0=0;MQRankSum=-19.354;QD=142.02;ReadPosRankSum=-0.144;VQSLOD=4.0703;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,132,5646	0/0:13,0:13:39.13:0,39,1700	0/0:20,0:20:24.08:0,24,843	0/0:27,0:27:48.13:0,48,1502	1/1:18,8:27:54.19:4308,54,0	1/1:14,4:21:48.16:3767,48,0	1/1:28,6:38:69.24:4878,69,0	0/0:28,0:28:60.20:0,60,2423	0/0:28,0:28:63.20:0,63,2928	0/0:29,0:28:63.20:0,63,2890	0/0:18,0:18:48.15:0,48,1940	0/0:25,0:25:69.24:0,69,3040	0/0:26,0:26:63.22:0,63,2860	0/0:32,0:32:93.22:0,93,3866	1/1:20,7:29:66.23:4448,66,0	1/1:24,15:43:99:8520,108,0	0/0:45,0:45:99:0,120,5202	1/1:17,4:26:48.12:3525,48,0	1/1:25,3:30:69.23:3990,69,0	1/1:20,6:27:51.17:3515,51,0	1/1:40,3:50:60.21:4378,60,0	0/0:19,0:19:51.17:0,51,2278	0/0:18,0:18:45.15:0,45,2115	0/0:31,0:31:81.28:0,81,3841	0/0:23,0:23:54.19:0,54,2585	0/0:35,0:35:99:0,99,4410	0/0:24,0:24:54.18:0,54,2483	0/0:24,0:24:60.19:0,60,2868
chr10	15338993	.	C	CT	1833.47	PASS	AB=1.000;AC=22;AF=0.393;AN=56;BaseQRankSum=9.535;DP=394;FS=2.330;HRun=4;HaplotypeScore=60.9593;InbreedingCoeff=0.7137;MQ=73.05;MQ0=5;MQRankSum=-1.604;QD=12.47;ReadPosRankSum=1.099;VQSLOD=1.5807;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:75.10:0,75,776	1/1:5,0:5:0.50:2,1,0	0/1:37,0:16:3.52:4,0,110	0/0:18,0:11:1.39:0,1,77	1/1:6,7:13:26.98:292,27,0	1/1:4,9:13:35.98:381,36,0	1/1:0,6:6:15.04:176,15,0	0/0:23,0:23:9.77:0,10,151	0/1:14,0:14:6.54:7,0,60	0/0:17,0:17:20.75:0,21,179	0/0:14,0:14:17.83:0,18,199	0/0:13,0:13:30.02:0,30,295	0/0:5,0:5:14.92:0,15,140	0/0:10,0:10:24.05:0,24,251	1/1:8,1:13:33.01:306,33,0	1/1:1,0:7:13.96:124,14,0	0/0:29,0:29:0.90:0,1,173	1/1:3,0:9:23.90:222,24,0	1/1:11,2:13:17.01:208,17,0	1/1:6,6:12:29.31:264,29,0	1/1:1,4:5:5.88:47,6,0	0/0:7,0:7:12.02:0,12,120	0/0:5,0:5:14.95:0,15,136	0/0:7,0:7:21.03:0,21,211	0/0:16,0:16:38.16:0,38,410	0/0:10,0:10:19.74:0,20,171	0/0:23,0:23:11.11:0,11,144	0/0:19,0:19:0.65:0,1,112
chr10	15338997	.	T	TA	2192.38	PASS	AB=0.857;AC=34;AF=0.607;AN=56;BaseQRankSum=-0.305;DP=391;FS=0.562;HRun=14;HaplotypeScore=59.0863;InbreedingCoeff=0.6250;MQ=71.40;MQ0=8;MQRankSum=0.071;QD=7.97;ReadPosRankSum=-0.724;VQSLOD=2.2962;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:33:73.42:0,73,450	1/1:0,5:5:9:79,9,0	0/1:40,0:15:1.70:2,0,13	0/0:23,0:12:9.42:0,9,58	1/1:15,0:15:6.76:83,7,0	1/1:13,0:13:25.19:116,25,0	1/1:6,0:6:14.10:68,14,0	1/1:6,14:20:9.43:320,9,0	1/1:4,7:11:21:184,21,0	1/1:6,10:17:32.75:260,33,0	0/1:9,4:13:4.42:72,0,4	0/0:11,0:11:14.77:0,15,96	0/0:6,0:6:8.83:0,9,58	0/0:7,0:8:19.77:0,20,121	1/1:12,0:12:15.43:64,15,0	1/1:7,0:7:8.96:38,9,0	1/1:8,18:29:20.99:399,21,0	1/1:10,0:10:11.84:52,12,0	1/1:11,0:11:8.69:46,9,0	0/1:11,0:11:13.53:32,0,14	1/1:4,0:4:2.04:6,2,0	0/0:5,0:5:8.75:0,9,53	0/0:5,0:5:5.90:0,6,38	0/0:6,0:7:13.86:0,14,83	0/0:16,1:17:8.98:0,9,183	0/1:6,4:11:4.44:75,0,4	1/1:6,13:20:9.39:184,9,0	1/1:4,13:19:9.14:306,9,0
chr10	15339010	.	A	AT	1033.65	PASS	AB=0.821;AC=18;AF=0.321;AN=56;BaseQRankSum=8.565;DP=363;FS=15.148;HRun=0;HaplotypeScore=59.2185;InbreedingCoeff=0.6875;MQ=65.53;MQ0=8;MQRankSum=-4.495;QD=10.44;ReadPosRankSum=1.381;VQSLOD=2.3262;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:93.03:0,93,1109	0/0:7,0:7:9.91:0,10,75	0/0:32,0:9:3.51:0,4,91	0/0:25,0:12:13.75:0,14,91	0/1:14,0:14:34.86:63,0,35	1/1:12,0:12:8.70:23,9,0	1/1:7,0:7:3.15:43,3,0	0/0:23,0:23:27.23:0,27,233	1/1:8,0:8:3.22:9,3,0	0/0:14,0:14:21.04:0,21,125	0/0:8,0:8:16.01:0,16,118	0/0:7,0:7:18.05:0,18,233	0/0:6,0:6:17.97:0,18,188	0/0:9,0:9:24:0,24,293	1/1:1,8:9:14.70:131,15,0	1/1:3,4:7:17.70:147,18,0	0/0:27,0:27:21.20:0,21,184	0/1:4,5:9:5.24:145,0,5	1/1:4,16:19:50.61:409,51,0	1/1:9,0:9:16.92:197,17,0	1/1:4,0:4:5.97:53,6,0	0/0:3,0:3:9.02:0,9,111	0/0:3,0:3:9.02:0,9,109	0/0:5,0:5:14.98:0,15,182	0/0:17,0:17:45.58:0,46,555	0/0:6,0:6:11.88:0,12,90	0/0:20,0:20:22.45:0,22,182	0/0:18,0:18:5.82:0,6,126
chr10	15339011	.	A	ATT	2805.73	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=5.660;DP=359;FS=20.579;HRun=2;HaplotypeScore=61.2588;InbreedingCoeff=0.9422;MQ=64.44;MQ0=7;MQRankSum=-2.924;QD=30.50;ReadPosRankSum=-1.147;VQSLOD=1.8138;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:90.26:0,90,1252	0/0:7,0:7:18.04:0,18,210	0/0:31,0:10:17.42:0,17,164	0/0:21,0:10:9.62:0,10,73	1/1:3,10:14:39.03:511,39,0	1/1:0,9:12:27.09:402,27,0	1/1:3,4:7:18.53:263,19,0	0/0:25,0:25:54.34:0,54,688	0/0:9,0:9:21:0,21,212	0/0:14,0:14:28.07:0,28,384	0/0:7,0:7:21:0,21,244	0/0:7,0:7:18.05:0,18,242	0/0:6,0:6:18.06:0,18,246	0/0:9,0:9:24.07:0,24,331	1/1:9,0:9:17.97:224,18,0	1/1:7,0:7:18.06:265,18,0	0/0:24,0:24:49.55:0,50,559	1/1:7,3:10:21.07:323,21,0	1/1:20,0:19:48.15:659,48,0	1/1:9,0:9:24.94:281,25,0	1/1:4,0:4:6.02:87,6,0	0/0:3,0:3:9.03:0,9,123	0/0:3,0:3:9.03:0,9,129	0/0:5,0:5:15.04:0,15,201	0/0:16,0:16:42.14:0,42,599	0/0:7,0:7:18.05:0,18,225	0/0:20,0:20:41.85:0,42,486	0/0:17,0:17:50.63:0,51,526
chr10	15339211	.	CT	C	988.51	PASS	AB=0.938;AC=18;AF=0.321;AN=56;BaseQRankSum=2.111;DP=345;FS=0.582;HRun=15;HaplotypeScore=59.2739;InbreedingCoeff=0.5891;MQ=71.79;MQ0=12;MQRankSum=1.785;QD=7.78;ReadPosRankSum=3.203;VQSLOD=2.7914;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,1:29:6.59:0,7,266	1/1:2,2:4:5.82:38,6,0	0/0:21,0:10:2.96:0,3,19	0/1:12,2:10:10.24:10,0,17	0/0:6,0:6:12:0,12,105	0/0:3,0:3:0:0,0,0	0/0:17,1:18:8.06:0,8,177	1/1:12,8:19:22.22:151,22,0	0/0:6,0:5:0:0,0,0	1/1:0,9:9:26.59:171,27,0	1/1:3,4:6:8.83:57,9,0	0/1:10,0:9:4.26:4,0,90	0/0:5,0:6:14.71:0,15,109	0/0:3,0:3:3:0,3,26	0/0:3,0:9:14.98:0,15,92	0/0:2,0:5:11.72:0,12,76	1/1:12,23:34:50.92:405,51,0	0/0:25,0:27:19.87:0,20,166	0/0:20,0:20:21.10:0,21,112	0/0:3,0:3:5.83:0,6,34	0/0:11,0:9:2.90:0,3,16	0/0:3,0:3:6:0,6,52	0/0:2,0:3:6:0,6,53	0/0:28,0:28:36.89:0,37,308	0/0:9,1:9:4.47:0,4,151	1/1:6,7:12:20.37:134,20,0	1/1:4,5:9:2.08:80,2,0	1/1:0,6:6:17.74:115,18,0
chr10	15339324	.	T	TA	1051.94	PASS	AB=0.921;AC=10;AF=0.179;AN=56;BaseQRankSum=-2.900;DP=410;FS=41.845;HRun=0;HaplotypeScore=77.5197;InbreedingCoeff=0.7317;MQ=46.13;MQ0=33;MQRankSum=1.854;QD=9.92;ReadPosRankSum=5.528;VQSLOD=1.8858;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:16:34.13:0,34,286	0/0:7,0:6:13.68:0,14,89	0/0:30,0:9:12.68:0,13,124	0/0:25,0:4:5.75:0,6,38	1/1:15,2:13:10.98:183,11,0	1/1:20,2:22:26.83:315,27,0	0/1:13,3:13:31.97:156,0,32	0/0:20,0:16:37.12:0,37,274	0/0:11,0:10:15.52:0,16,82	0/0:19,0:18:35.95:0,36,236	0/0:12,0:11:22.94:0,23,177	0/0:11,0:11:26.94:0,27,202	0/0:5,0:5:10.43:0,10,72	0/0:7,0:7:20.05:0,20,132	0/0:12,0:12:23.78:0,24,156	0/0:6,0:6:11.44:0,11,83	0/0:25,0:24:55.47:0,55,353	0/0:13,0:9:15.53:0,16,99	1/1:24,0:20:22.01:283,22,0	1/1:15,0:15:30.81:171,31,0	0/1:12,0:9:0.31:107,0,0	0/0:3,0:3:5.93:0,6,40	0/0:10,0:9:23.32:0,23,193	0/0:15,0:14:28.54:0,29,268	0/0:7,0:6:11.81:0,12,89	0/0:15,0:13:33.65:0,34,256	0/0:14,0:11:30.19:0,30,180	0/0:19,0:17:24.60:0,25,158
chr10	15339353	.	CT	C	1585.92	PASS	AB=0.900;AC=19;AF=0.339;AN=56;BaseQRankSum=1.399;DP=401;FS=34.290;HRun=9;HaplotypeScore=50.9581;InbreedingCoeff=0.8140;MQ=48.05;MQ0=32;MQRankSum=2.275;QD=10.94;ReadPosRankSum=2.742;VQSLOD=0.4396;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:21:31.65:0,32,327	0/0:4,0:4:6.02:0,6,69	0/0:13,0:5:12.04:0,12,139	0/0:14,0:4:8.05:0,8,76	1/1:12,6:15:8.96:82,9,0	1/1:7,7:14:11.89:110,12,0	1/1:7,10:13:20.72:192,21,0	0/0:25,0:22:41.38:0,41,437	0/0:13,0:12:21.79:0,22,198	0/0:17,1:16:8.61:0,9,340	0/1:8,1:9:18.43:18,0,60	0/0:12,0:11:22.42:0,22,241	0/0:7,0:7:7.26:0,7,72	0/0:8,0:8:21.79:0,22,181	1/1:3,7:10:13.76:181,14,0	1/1:2,5:7:4.70:76,5,0	0/0:23,1:24:28.33:0,28,459	1/1:5,8:10:20.75:192,21,0	1/1:6,19:21:57.02:521,57,0	1/1:10,10:19:8.71:225,9,0	1/1:2,9:8:21.01:191,21,0	0/0:8,0:7:18.01:0,18,192	0/0:13,0:12:18.52:0,19,210	0/0:15,0:14:19.50:0,20,176	0/0:8,0:9:20.89:0,21,222	0/0:12,0:12:33.10:0,33,381	0/0:18,0:15:29.06:0,29,223	0/0:20,0:18:30.36:0,30,268
chr10	15340488	.	G	GTCTCTGTC	8479.21	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-6.497;DP=658;FS=1.512;HRun=0;HaplotypeScore=163.7582;InbreedingCoeff=0.9656;MQ=67.54;MQ0=4;MQRankSum=-10.359;QD=44.86;ReadPosRankSum=2.547;VQSLOD=4.8544;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,123,2789	0/0:11,0:11:27.09:0,27,612	0/0:46,0:40:12.95:0,13,1105	0/0:29,0:22:23.59:0,24,428	1/1:10,24:37:42.14:1786,42,0	1/1:2,16:20:18.06:766,18,0	1/1:2,11:14:12.04:511,12,0	0/0:33,0:33:63.17:0,63,1235	0/0:19,0:19:51.17:0,51,1313	0/0:25,0:25:66.20:0,66,1507	0/0:24,0:24:60.16:0,60,1431	0/0:18,0:18:51.18:0,51,1362	0/0:18,0:18:48.16:0,48,1022	0/0:22,0:22:57.18:0,57,1399	1/1:6,16:23:36.12:1531,36,0	1/1:8,12:21:33.11:1405,33,0	0/0:31,0:31:90.24:0,90,2017	1/1:5,7:13:5.16:254,5,0	1/1:11,10:21:33.99:884,34,0	1/1:3,14:18:21.07:888,21,0	1/1:19,0:20:18.06:453,18,0	0/0:26,0:26:69.22:0,69,1611	0/0:19,0:19:42.10:0,42,918	0/0:24,0:24:54.19:0,54,1347	0/0:19,0:19:48.16:0,48,1278	0/0:22,0:22:60.19:0,60,1448	0/0:26,0:25:60.19:0,60,1336	0/0:13,0:13:15.05:0,15,400
chr10	15341162	.	A	ATTCT	10118.21	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=16.804;DP=570;FS=1.537;HRun=0;HaplotypeScore=143.3815;InbreedingCoeff=0.9966;MQ=76.82;MQ0=0;MQRankSum=-15.786;QD=58.15;ReadPosRankSum=0.052;VQSLOD=6.3903;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:93.32:0,93,1848	0/0:9,0:9:27.09:0,27,527	0/0:14,0:14:39.13:0,39,744	0/0:17,0:17:50.66:0,51,945	1/1:10,19:30:63.21:1359,63,0	1/1:8,20:30:86.78:1878,87,0	1/1:7,7:14:42.13:877,42,0	0/0:32,0:31:84.29:0,84,1651	0/0:25,0:25:75.21:0,75,1457	0/0:23,0:23:69.24:0,69,1373	0/0:21,0:21:63.19:0,63,1221	0/0:17,0:17:48.15:0,48,902	0/0:27,0:27:75.24:0,75,1454	0/0:12,0:12:36.11:0,36,683	1/1:4,23:27:75.26:1670,75,0	1/1:8,10:18:54.15:1139,54,0	0/0:25,0:25:66.23:0,66,1300	1/1:1,5:6:15.05:347,15,0	1/1:8,6:14:36.12:845,36,0	1/1:10,15:25:69.24:1570,69,0	1/1:8,2:10:21.04:432,21,0	0/0:14,0:14:42.14:0,42,837	0/0:21,0:21:60.21:0,60,1171	0/0:19,0:19:57.12:0,57,1002	0/0:28,0:27:81.28:0,81,1618	0/0:24,0:24:72.25:0,72,1438	0/0:17,0:16:42.14:0,42,805	0/0:19,0:19:57.20:0,57,1139
chr10	15341163	.	TAAGA	T	2188.74	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=15.520;DP=516;FS=2.802;HRun=0;HaplotypeScore=139.3515;InbreedingCoeff=0.9839;MQ=80.00;MQ0=0;MQRankSum=-14.036;QD=17.65;ReadPosRankSum=2.752;VQSLOD=3.5345;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:93.32:0,93,2626	0/0:9,0:9:27.09:0,27,766	0/0:14,0:14:42.14:0,42,1094	0/0:17,0:17:51.18:0,51,1449	1/1:20,4:24:58.77:435,59,0	1/1:24,0:24:71.16:506,71,0	1/1:9,0:9:26.68:183,27,0	0/0:30,0:29:87.30:0,87,2455	0/0:25,0:25:75.26:0,75,2135	0/0:23,0:23:69.24:0,69,1969	0/0:21,0:21:63.19:0,63,1761	0/0:18,0:18:51.17:0,51,1392	0/0:27,0:27:75.24:0,75,2076	0/0:12,0:12:36.12:0,36,1033	1/1:23,0:23:67.51:419,68,0	1/1:12,0:12:35.58:244,36,0	0/0:23,0:23:66.23:0,66,1854	1/1:5,0:5:11.97:95,12,0	1/1:7,0:7:18.01:159,18,0	1/1:15,1:16:47.25:302,47,0	1/1:4,0:4:8.87:58,9,0	0/0:14,0:14:42.14:0,42,1198	0/0:21,0:21:63.22:0,63,1732	0/0:19,0:19:57.14:0,57,1458	0/0:28,0:27:84.29:0,84,2416	0/0:24,0:24:72.25:0,72,2057	0/0:17,0:16:48.16:0,48,1280	0/0:19,0:19:57.20:0,57,1652
chr10	15341164	.	A	ATTC	3955.60	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=16.081;DP=514;FS=3.480;HRun=0;HaplotypeScore=123.7509;InbreedingCoeff=0.9770;MQ=81.52;MQ0=0;MQRankSum=-14.497;QD=32.96;ReadPosRankSum=3.426;VQSLOD=3.9981;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:93.32:0,93,1719	0/0:9,0:9:27.09:0,27,495	0/0:15,0:15:42.14:0,42,729	0/0:18,0:18:51.17:0,51,931	1/1:5,19:24:60.13:681,60,0	1/1:3,20:23:69.16:818,69,0	1/1:1,7:8:23.43:254,23,0	0/0:33,0:32:87.28:0,87,1550	0/0:25,0:25:75.26:0,75,1377	0/0:23,0:23:69.23:0,69,1258	0/0:21,0:21:60.21:0,60,1118	0/0:18,0:18:51.13:0,51,878	0/0:26,0:26:72.23:0,72,1311	0/0:12,0:12:36.12:0,36,665	1/1:0,23:23:69.20:802,69,0	1/1:0,10:10:30.09:360,30,0	0/0:23,0:23:66.20:0,66,1194	1/1:0,5:5:12.04:163,12,0	1/1:2,6:8:19.31:258,19,0	1/1:1,15:16:45.14:545,45,0	1/1:1,2:3:6.02:74,6,0	0/0:14,0:14:42.14:0,42,769	0/0:21,0:21:63.19:0,63,1080	0/0:17,0:17:51.16:0,51,906	0/0:28,0:27:84.28:0,84,1537	0/0:24,0:24:72.25:0,72,1341	0/0:17,0:16:48.09:0,48,770	0/0:19,0:19:57.20:0,57,1063
chr10	15341165	.	AG	A	1988.21	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=16.019;DP=507;FS=2.861;HRun=1;HaplotypeScore=110.9879;InbreedingCoeff=0.9771;MQ=81.78;MQ0=0;MQRankSum=-14.838;QD=16.57;ReadPosRankSum=3.120;VQSLOD=4.2268;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:93.30:0,93,1457	0/0:10,0:10:30.09:0,30,457	0/0:15,0:15:44.46:0,44,614	0/0:18,0:18:54.17:0,54,825	1/1:5,19:24:57.87:373,58,0	1/1:3,20:23:67.21:441,67,0	1/1:0,7:7:20.67:133,21,0	0/0:33,0:32:96.30:0,96,1453	0/0:25,0:25:75.26:0,75,1195	0/0:22,0:22:66.23:0,66,1056	0/0:21,0:21:63.20:0,63,984	0/0:18,0:18:48.16:0,48,765	0/0:25,0:25:69.24:0,69,1102	0/0:12,0:12:36.12:0,36,575	1/1:0,23:23:67.83:435,68,0	1/1:0,10:10:29.65:201,30,0	0/0:22,0:22:63.21:0,63,989	1/1:0,5:5:11.95:93,12,0	1/1:3,6:9:23.87:182,24,0	1/1:1,15:16:44.49:301,44,0	1/1:1,2:3:5.94:41,6,0	0/0:14,0:14:42.14:0,42,668	0/0:19,0:19:57.19:0,57,911	0/0:16,0:16:48.16:0,48,767	0/0:28,0:27:84.29:0,84,1341	0/0:24,0:24:72.25:0,72,1142	0/0:15,0:14:42.14:0,42,671	0/0:19,0:19:57.19:0,57,911
chr10	15341291	.	A	AG	1864.53	PASS	AB=1.000;AC=16;AF=0.286;AN=56;BaseQRankSum=5.368;DP=574;FS=2.646;HRun=0;HaplotypeScore=99.5283;InbreedingCoeff=0.7288;MQ=65.60;MQ0=8;MQRankSum=2.849;QD=11.10;ReadPosRankSum=4.588;VQSLOD=4.2300;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:95.91:0,96,817	0/0:3,0:3:8.97:0,9,73	0/0:31,0:10:2.67:0,3,144	0/0:28,0:14:5.72:0,6,129	1/1:0,24:24:62.59:605,63,0	1/1:3,22:25:66.30:729,66,0	1/1:1,10:13:23.90:243,24,0	0/0:33,0:31:88.44:0,88,672	0/0:22,0:22:44.55:0,45,315	0/0:27,0:27:64.60:0,65,476	0/0:26,0:26:67.90:0,68,459	0/0:11,0:11:29.81:0,30,248	0/0:14,0:14:41.64:0,42,366	0/0:16,0:16:26.94:0,27,234	0/1:16,0:16:27.04:42,0,27	1/1:18,1:19:2.47:102,2,0	0/0:24,0:24:59.32:0,59,417	0/1:18,0:18:1.22:71,0,1	1/1:25,0:24:15.81:144,16,0	1/1:20,0:20:3.71:58,4,0	1/1:8,0:8:6.73:53,7,0	0/0:13,0:13:32.91:0,33,266	0/0:14,0:14:33:0,33,314	0/0:11,0:11:26.90:0,27,223	0/0:25,0:25:58.77:0,59,490	0/0:22,0:22:65.49:0,65,498	0/0:31,0:30:77.43:0,77,549	0/0:12,0:12:17.85:0,18,140
chr10	15342309	.	T	TGAG	10701.89	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=15.109;DP=681;FS=0.330;HRun=0;HaplotypeScore=108.4555;InbreedingCoeff=0.9971;MQ=77.11;MQ0=0;MQRankSum=-4.575;QD=51.95;ReadPosRankSum=1.000;VQSLOD=6.4501;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,111,1812	1/1:0,6:6:15.05:335,15,0	0/0:22,0:22:30.83:0,31,693	0/0:25,0:25:69.17:0,69,1058	0/0:27,0:27:60.20:0,60,971	0/0:23,0:23:65.03:0,65,1034	0/0:27,0:27:81.28:0,81,1314	1/1:7,14:21:48.15:979,48,0	1/1:2,22:23:57.20:1270,57,0	1/1:3,21:24:66.23:1438,66,0	1/1:2,11:13:27.09:589,27,0	0/0:22,0:22:60.20:0,60,980	0/0:25,0:25:69.24:0,69,1124	0/0:20,0:20:57.15:0,57,880	0/0:24,0:24:72.24:0,72,1153	0/0:30,0:30:81.27:0,81,1301	1/1:4,30:33:32.27:1641,32,0	0/0:25,0:25:66.14:0,66,1054	0/0:21,0:21:60.20:0,60,956	0/0:23,0:23:63.19:0,63,971	0/0:21,0:21:63.20:0,63,1004	0/0:27,0:27:78.27:0,78,1274	0/0:31,0:31:93.30:0,93,1495	0/0:25,0:25:69.22:0,69,1096	0/0:19,0:19:51.17:0,51,833	1/1:5,36:41:62.37:2322,62,0	1/1:2,27:31:69.24:1525,69,0	1/1:2,9:11:27.09:603,27,0
chr10	15343055	.	TG	T	10340.21	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-4.068;DP=621;FS=13.232;HRun=11;HaplotypeScore=95.9356;InbreedingCoeff=0.9168;MQ=72.00;MQ0=1;MQRankSum=-2.376;QD=19.18;ReadPosRankSum=5.286;VQSLOD=4.4145;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:14,26:42:75.43:727,75,0	1/1:0,10:10:29.97:246,30,0	0/0:13,0:13:4.45:0,4,177	0/0:20,0:20:44.48:0,44,391	0/0:14,0:17:8.67:0,9,48	0/0:14,0:18:14.35:0,14,80	0/0:8,0:13:5.72:0,6,29	1/1:7,20:26:56.75:464,57,0	1/1:5,30:35:89.82:738,90,0	1/1:2,17:19:53.89:439,54,0	1/1:2,20:22:59.88:492,60,0	1/1:9,17:27:61.94:494,62,0	1/1:10,12:22:18.96:362,19,0	1/1:3,9:12:26.94:221,27,0	1/1:5,11:16:35.93:292,36,0	1/1:1,24:25:68.90:566,69,0	1/1:2,25:27:71.90:591,72,0	1/1:6,23:29:68.92:566,69,0	1/1:5,15:20:44.82:369,45,0	1/1:2,25:27:77.88:640,78,0	1/1:3,25:28:68.84:566,69,0	1/1:6,11:17:29.94:246,30,0	1/1:9,12:22:31.98:252,32,0	1/1:4,21:25:65.92:542,66,0	1/1:6,11:17:32.95:271,33,0	1/1:10,19:28:53.73:443,54,0	1/1:2,27:29:71.91:591,72,0	1/1:3,9:12:26.96:221,27,0
chr10	15343399	.	GTA	G	5015.93	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=14.640;DP=577;FS=4.767;HRun=0;HaplotypeScore=76.6717;InbreedingCoeff=0.9820;MQ=84.96;MQ0=0;MQRankSum=-3.189;QD=38.88;ReadPosRankSum=3.330;VQSLOD=6.7046;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,117,1985	0/0:10,0:10:30.10:0,30,562	0/0:23,0:23:66.18:0,66,1129	0/0:13,0:13:33.11:0,33,612	1/1:0,28:28:72.24:1057,72,0	1/1:0,21:21:60.20:883,60,0	1/1:0,20:20:51.17:751,51,0	0/0:33,0:33:93.31:0,93,1696	0/0:23,0:23:69.24:0,69,1280	0/0:20,0:20:60.20:0,60,1092	0/0:16,0:16:45.15:0,45,842	0/0:17,0:17:51.16:0,51,923	0/0:16,0:16:48.16:0,48,883	0/0:18,0:18:54.19:0,54,1011	1/1:0,21:21:60.20:884,60,0	1/1:1,22:23:7.04:827,7,0	0/0:22,0:22:66.21:0,66,1195	1/1:1,15:16:42.14:613,42,0	0/0:14,0:14:39.13:0,39,720	0/0:30,0:30:90.28:0,90,1608	0/0:24,0:24:69.24:0,69,1281	0/0:20,0:20:60.18:0,60,1060	0/0:20,0:20:60.21:0,60,1124	0/0:18,0:18:54.16:0,54,978	0/0:12,0:12:33.10:0,33,587	0/0:23,0:23:66.22:0,66,1200	0/0:24,0:23:66.23:0,66,1230	0/0:11,0:11:33.11:0,33,618
chr10	15343692	.	A	AAATAAGTACATCTT	11929.45	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-0.606;DP=543;FS=0.491;HRun=0;HaplotypeScore=210.5369;InbreedingCoeff=0.9766;MQ=63.24;MQ0=0;MQRankSum=-11.178;QD=107.47;ReadPosRankSum=-1.140;VQSLOD=4.5810;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,111,4664	0/0:2,0:2:6.02:0,6,256	0/0:20,0:17:48.14:0,48,1512	0/0:18,0:15:35.93:0,36,1391	1/1:4,5:19:29.82:1472,30,0	1/1:6,11:27:54.19:3546,54,0	1/1:5,4:16:30.10:1773,30,0	0/0:29,0:29:78.25:0,78,2768	0/0:23,0:23:60.19:0,60,2171	0/0:15,0:15:39.13:0,39,1557	0/0:18,0:18:48.15:0,48,1711	0/0:17,0:17:45.15:0,45,1555	0/0:13,0:13:33.10:0,33,1300	0/0:25,0:25:66.18:0,66,2422	1/1:4,9:23:36.12:2220,36,0	1/1:1,6:13:21.07:1398,21,0	0/0:19,0:19:54.17:0,54,2003	1/1:7,3:13:24.08:1520,24,0	0/0:24,0:24:66.20:0,66,2532	0/0:21,0:21:60.20:0,60,2234	0/0:22,0:22:66.23:0,66,2414	0/0:9,0:9:27.09:0,27,1131	0/0:13,0:13:33.11:0,33,1358	0/0:23,0:23:60.20:0,60,2391	0/0:10,0:9:27.08:0,27,876	0/0:22,0:22:66.23:0,66,2626	0/0:37,0:37:99:0,111,4157	0/0:8,0:8:24.08:0,24,803
chr10	15343845	.	A	ACC	473.80	PASS	AB=0.898;AC=9;AF=0.225;AN=40;BaseQRankSum=0.136;DP=261;FS=6.120;HRun=0;HaplotypeScore=67.2480;InbreedingCoeff=-0.2814;MQ=33.97;MQ0=29;MQRankSum=-1.700;QD=4.47;ReadPosRankSum=-1.257;VQSLOD=1.3583;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:59.88:0,60,788	0/0:5,0:5:14.98:0,15,155	./.	./.	./.	./.	./.	0/1:24,2:19:92.17:92,0,156	0/1:5,0:4:9.96:10,0,25	0/1:5,5:10:20.05:104,0,20	0/1:9,0:9:8.90:9,0,120	0/0:10,0:10:24.06:0,24,290	0/0:8,0:6:12.04:0,12,155	0/0:11,0:11:21.05:0,21,252	./.	./.	0/1:15,1:13:30.64:31,0,119	./.	0/0:27,0:21:63.13:0,63,813	0/0:9,0:9:26.57:0,27,319	0/0:13,0:13:36.12:0,36,469	0/1:3,0:3:11.34:11,0,73	0/0:7,0:7:21.07:0,21,274	0/0:7,0:7:15.50:0,16,177	0/0:11,0:11:24.08:0,24,331	0/1:7,8:14:90.27:200,0,90	0/1:15,2:16:99:119,0,168	0/1:5,0:5:21.47:21,0,139
chr10	15345520	.	T	TTAGAGTAGAG	12744.32	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-7.802;DP=600;FS=23.840;HRun=0;HaplotypeScore=178.6426;InbreedingCoeff=0.9846;MQ=66.42;MQ0=0;MQRankSum=-14.208;QD=104.46;ReadPosRankSum=1.011;VQSLOD=3.4492;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,138,4169	0/0:5,0:5:15.05:0,15,429	0/0:17,0:16:42.14:0,42,999	0/0:20,0:19:48.16:0,48,1337	1/1:15,10:27:33.11:1636,33,0	1/1:5,15:20:54.14:2654,54,0	1/1:10,8:20:45.15:2344,45,0	0/0:25,0:25:63.21:0,63,1905	0/0:25,0:25:69.22:0,69,2076	0/0:31,0:31:84.28:0,84,2393	0/0:19,0:19:51.17:0,51,1595	0/0:16,0:16:45.15:0,45,1384	0/0:21,0:21:54.18:0,54,1610	0/0:13,0:13:39.12:0,39,1107	1/1:9,16:27:48.16:2505,48,0	1/1:10,14:25:63.22:3135,63,0	0/0:13,0:13:39.13:0,39,1263	1/1:1,2:3:9.03:470,9,0	0/0:26,0:26:72.25:0,72,2170	0/0:27,0:27:78.25:0,78,2392	0/0:33,0:33:96.31:0,96,2941	0/0:10,0:10:27.08:0,27,804	0/0:21,0:21:57.20:0,57,1795	0/0:28,0:28:75.24:0,75,2286	0/0:17,0:16:51.17:0,51,1467	0/0:31,0:31:87.28:0,87,2610	0/0:23,0:23:63.20:0,63,1933	0/0:11,0:11:33.11:0,33,878
chr10	15345741	.	TAC	T	361.36	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.394;DP=605;FS=1.272;HRun=0;HaplotypeScore=188.8205;InbreedingCoeff=0.8064;MQ=52.99;MQ0=12;MQRankSum=-7.706;QD=7.09;ReadPosRankSum=-4.915;VQSLOD=2.2301;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:54.05:0,54,928	0/0:9,0:9:3.94:0,4,27	0/0:27,0:9:17.99:0,18,203	0/0:24,0:7:9.03:0,9,129	1/1:11,9:25:17.19:135,17,0	1/1:12,3:15:22.47:213,22,0	1/1:9,2:11:21.52:151,22,0	0/0:53,0:53:99:0,141,1521	0/0:16,0:16:15.16:0,15,164	0/0:34,0:34:64.74:0,65,609	0/0:29,0:29:48.05:0,48,515	0/0:21,0:21:63.20:0,63,1107	0/0:24,0:24:69.21:0,69,1193	0/0:18,0:18:48.15:0,48,817	0/0:30,0:30:11.82:0,12,235	0/0:21,0:21:21.82:0,22,326	0/0:25,0:25:12.37:0,12,138	0/0:7,0:8:18.13:0,18,135	0/0:17,0:16:34.28:0,34,426	0/0:39,0:39:35.08:0,35,368	0/0:17,0:17:3.83:0,4,130	0/0:9,0:9:27.08:0,27,457	0/0:10,0:10:30.09:0,30,514	0/0:10,0:10:27.08:0,27,472	0/0:15,0:15:45.15:0,45,823	0/0:28,0:28:46.04:0,46,385	0/0:30,0:30:16.63:0,17,165	0/0:14,0:14:1.35:0,1,4
chr10	15345747	.	CATACATAT	C	10560.20	PASS	AB=1.000;AC=33;AF=0.589;AN=56;BaseQRankSum=11.623;DP=584;FS=10.551;HRun=0;HaplotypeScore=199.1419;InbreedingCoeff=0.6844;MQ=55.45;MQ0=11;MQRankSum=-3.960;QD=25.69;ReadPosRankSum=-2.347;VQSLOD=3.3532;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:47.90:0,48,1591	1/1:0,9:9:8.93:186,9,0	0/0:20,0:6:4.48:0,4,45	0/0:20,0:5:3.44:0,3,21	1/1:25,0:25:5.01:122,5,0	0/1:16,0:16:48.41:141,0,48	0/1:8,0:8:5.92:41,0,6	1/1:2,51:53:99:1265,152,0	1/1:1,15:16:21.07:461,21,0	1/1:2,33:35:94.24:1683,94,0	1/1:2,26:28:35.81:453,36,0	0/0:20,0:20:60.14:0,60,1923	0/0:25,0:25:75.13:0,75,2108	0/0:18,0:18:45.08:0,45,1350	1/1:23,0:28:64.15:793,64,0	1/1:15,0:23:2.23:536,2,0	1/1:2,20:22:12.56:242,13,0	0/1:7,0:7:7.13:37,0,7	1/1:2,12:13:32.88:333,33,0	1/1:0,38:38:72.05:1470,72,0	1/1:5,12:17:5.93:50,6,0	0/0:7,0:7:18.05:0,18,612	0/0:11,0:11:30.04:0,30,853	0/0:9,0:9:21.05:0,21,758	0/0:18,0:18:51.12:0,51,1483	1/1:0,27:27:77.97:1273,78,0	1/1:1,32:33:45.15:1138,45,0	1/1:0,12:12:12.04:335,12,0
chr10	15345749	.	T	TG	84.57	PASS	AB=0.903;AC=4;AF=0.071;AN=56;BaseQRankSum=7.834;DP=565;FS=18.730;HRun=0;HaplotypeScore=183.0338;InbreedingCoeff=0.2632;MQ=55.61;MQ0=9;MQRankSum=-6.059;QD=1.69;ReadPosRankSum=-2.227;VQSLOD=1.4570;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:48:0,48,668	0/0:9,0:9:7.93:0,8,53	0/0:19,0:6:9.24:0,9,64	0/0:17,1:5:3.48:0,3,30	0/1:19,6:25:20.85:75,0,21	1/1:14,3:17:3.15:100,3,0	0/1:8,0:8:3.87:4,0,10	0/0:53,0:53:99:0,147,1854	0/0:16,0:16:22.01:0,22,175	0/0:34,0:34:83.27:0,83,680	0/0:26,0:26:36.11:0,36,460	0/0:20,0:20:60.20:0,60,839	0/0:25,0:25:75.25:0,75,1042	0/0:18,0:18:54.14:0,54,702	0/0:21,2:27:9.18:0,9,188	0/0:15,0:21:7.85:0,8,266	0/0:22,0:22:13.51:0,14,105	0/0:5,0:5:9.49:0,9,99	0/0:14,0:13:35.44:0,35,428	0/0:38,0:38:63.15:0,63,519	0/0:14,0:14:11.26:0,11,96	0/0:6,0:6:18.06:0,18,252	0/0:10,0:10:30.10:0,30,419	0/0:8,0:8:21.07:0,21,294	0/0:17,0:17:51.17:0,51,711	0/0:27,0:27:60.39:0,60,524	0/0:32,0:31:38.73:0,39,225	0/0:12,0:12:9.98:0,10,35
chr10	15345750	.	AC	A	63.35	PASS	AB=0.979;AC=11;AF=0.196;AN=56;BaseQRankSum=7.928;DP=559;FS=4.999;HRun=1;HaplotypeScore=180.1317;InbreedingCoeff=-0.0585;MQ=55.85;MQ0=9;MQRankSum=-10.024;QD=0.28;ReadPosRankSum=5.945;VQSLOD=-0.5244;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:50.86:0,51,748	0/1:9,0:9:5.83:6,0,13	0/1:19,0:5:18.39:18,0,31	0/0:17,0:5:3.48:0,3,32	0/0:16,9:25:7.92:0,8,116	0/1:14,3:17:10.96:11,0,79	0/0:6,2:8:3.29:0,3,49	0/0:52,0:52:99:0,146,1688	0/1:15,0:15:7.76:8,0,68	0/1:33,0:33:27.05:27,0,404	0/0:26,0:26:35.88:0,36,334	0/0:20,0:20:60.20:0,60,938	0/0:25,0:25:75.24:0,75,1137	0/0:17,0:17:51.15:0,51,765	0/0:27,0:27:35.44:0,35,188	0/0:21,0:21:26.41:0,26,191	0/1:21,1:22:41.23:41,0,56	0/0:4,0:4:9.18:0,9,54	0/0:13,0:12:25.33:0,25,385	0/1:38,0:38:18.34:18,0,230	0/0:13,0:13:6.86:0,7,48	0/0:6,0:6:18.06:0,18,287	0/0:10,0:10:30.10:0,30,465	0/0:9,0:9:24.08:0,24,369	0/0:17,0:17:51.16:0,51,773	0/1:27,0:27:9.11:9,0,377	0/1:32,0:31:42.49:42,0,67	1/1:12,0:12:7.93:25,8,0
chr10	15345751	.	CAT	C	886.73	PASS	AB=0.995;AC=18;AF=0.321;AN=56;BaseQRankSum=8.852;DP=561;FS=5.401;HRun=0;HaplotypeScore=184.7442;InbreedingCoeff=0.0648;MQ=56.03;MQ0=10;MQRankSum=-10.421;QD=2.88;ReadPosRankSum=4.938;VQSLOD=1.7475;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,1:25:10.52:0,11,651	1/1:9,0:9:5.50:26,6,0	1/1:19,0:6:4.53:15,5,0	0/0:16,0:5:3.01:0,3,41	0/1:26,0:26:31.38:61,0,31	0/1:17,1:18:41.97:101,0,42	1/1:7,1:8:6.12:110,6,0	0/0:52,0:52:92.79:0,93,483	0/1:15,0:15:23.52:36,0,24	0/1:33,0:33:78.52:134,0,79	0/0:26,0:26:18.91:0,19,118	0/0:20,0:20:51.17:0,51,816	0/0:24,1:25:31.71:0,32,994	0/0:17,0:17:47.65:0,48,702	0/1:27,0:27:59.32:118,0,59	0/1:21,0:21:25.44:80,0,25	0/1:22,0:22:5.18:18,0,5	0/0:3,1:4:2.99:0,3,23	0/0:13,0:12:11.89:0,12,108	0/1:38,0:38:77.06:103,0,77	0/0:13,0:13:1.25:0,1,3	0/0:6,0:6:12.04:0,12,198	0/0:11,0:11:30.08:0,30,448	0/0:9,0:9:6.09:0,6,236	0/0:16,0:16:39.13:0,39,619	0/1:27,0:27:78.28:78,0,97	0/1:32,0:31:13.34:119,0,13	1/1:12,0:12:11.23:53,11,0
chr10	15345752	.	A	ATG	314.50	PASS	AB=0.832;AC=6;AF=0.107;AN=56;BaseQRankSum=9.800;DP=557;FS=2.254;HRun=0;HaplotypeScore=189.2997;InbreedingCoeff=0.0594;MQ=56.24;MQ0=7;MQRankSum=-7.751;QD=3.18;ReadPosRankSum=-1.798;VQSLOD=2.6867;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:54.09:0,54,729	0/0:9,0:9:8.66:0,9,47	0/0:17,0:6:2:0,2,43	0/0:16,0:6:2.99:0,3,30	0/1:21,5:26:27.12:65,0,27	0/1:15,2:17:25.03:88,0,25	1/1:8,0:8:2.85:27,3,0	0/0:52,0:52:99:0,147,1772	0/0:15,0:15:20.43:0,20,163	0/0:33,0:33:78.74:0,79,703	0/0:26,0:26:35.64:0,36,366	0/0:21,0:21:60.16:0,60,853	0/0:25,0:25:75.11:0,75,1049	0/0:17,0:17:51.07:0,51,727	0/1:21,6:27:31.30:149,0,31	0/1:15,6:21:99:103,0,131	0/0:22,0:22:14.55:0,15,110	0/0:3,0:3:3.48:0,3,35	0/0:13,0:12:32.87:0,33,408	0/0:38,0:38:70.18:0,70,567	0/0:13,0:13:2.55:0,3,32	0/0:6,0:6:18.03:0,18,233	0/0:10,0:10:30.06:0,30,413	0/0:9,0:9:24.03:0,24,301	0/0:17,0:17:48.12:0,48,671	0/0:27,0:27:67.54:0,68,634	0/0:32,0:31:43.39:0,43,305	0/0:12,0:12:11.47:0,11,59
chr10	15345759	.	T	TGAC	2788.61	PASS	AB=0.820;AC=9;AF=0.161;AN=56;BaseQRankSum=8.352;DP=575;FS=5.970;HRun=0;HaplotypeScore=194.7051;InbreedingCoeff=0.2921;MQ=58.00;MQ0=5;MQRankSum=-9.417;QD=22.67;ReadPosRankSum=-4.731;VQSLOD=2.1207;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:54.18:0,54,967	0/0:11,0:11:5.85:0,6,48	0/1:14,0:7:58.51:59,0,84	0/0:15,0:6:5.91:0,6,60	0/1:13,6:24:57.33:479,0,57	0/1:10,7:19:99:507,0,115	0/1:7,4:11:13.93:365,0,14	0/0:56,0:56:99:0,117,1926	0/0:18,0:18:23.74:0,24,253	0/0:32,0:32:59.41:0,59,998	0/0:28,0:28:25.64:0,26,440	0/0:20,0:20:60.19:0,60,1085	0/0:24,0:24:72.24:0,72,1302	0/0:17,0:17:51.17:0,51,948	1/1:17,8:31:26.16:1002,26,0	1/1:11,4:21:26.53:485,27,0	0/0:23,0:23:15:0,15,195	0/1:3,0:3:34.65:43,0,35	0/0:15,0:14:30.10:0,30,494	0/0:43,0:43:74.28:0,74,921	0/0:13,0:13:4.50:0,4,16	0/0:7,0:7:21.05:0,21,331	0/0:11,0:11:33.11:0,33,607	0/0:7,0:7:21.07:0,21,386	0/0:16,0:16:48.16:0,48,893	0/0:26,0:26:33.22:0,33,868	0/0:34,0:33:48.09:0,48,615	0/0:13,0:13:12.03:0,12,139
chr10	15345789	.	C	CAT	1495.74	PASS	AB=0.857;AC=7;AF=0.125;AN=56;BaseQRankSum=2.065;DP=566;FS=5.242;HRun=0;HaplotypeScore=153.5014;InbreedingCoeff=0.7845;MQ=58.88;MQ0=2;MQRankSum=-7.088;QD=22.32;ReadPosRankSum=-1.786;VQSLOD=3.7878;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:51.16:0,51,662	0/0:10,0:10:24.04:0,24,293	0/0:6,0:4:8.39:0,8,86	0/1:10,0:10:15.25:15,0,141	0/0:29,0:29:22.36:0,22,610	0/0:22,0:22:47.99:0,48,548	0/0:17,0:18:39:0,39,449	0/0:41,0:41:93.30:0,93,1208	0/0:16,0:16:24:0,24,275	0/0:28,0:28:75.20:0,75,952	0/0:30,0:30:69.12:0,69,843	0/0:14,0:14:36.12:0,36,468	0/0:28,0:28:75.23:0,75,960	0/0:16,0:16:45.14:0,45,572	1/1:8,20:29:60.95:929,61,0	1/1:9,10:20:29.01:493,29,0	0/0:19,0:19:33.11:0,33,429	1/1:1,5:6:12.04:204,12,0	0/0:20,0:20:51.14:0,51,637	0/0:37,0:37:84.10:0,84,1002	0/0:10,0:10:12.04:0,12,156	0/0:8,0:8:18.06:0,18,234	0/0:14,0:15:42.12:0,42,531	0/0:6,0:6:9.03:0,9,117	0/0:17,0:17:51.17:0,51,663	0/0:27,0:27:75.15:0,75,924	0/0:39,0:38:54.06:0,54,644	0/0:19,0:19:33.07:0,33,411
chr10	15346849	.	A	AC	722.93	PASS	AB=0.765;AC=32;AF=0.667;AN=48;BaseQRankSum=-2.966;DP=304;FS=13.775;HRun=10;HaplotypeScore=46.7269;InbreedingCoeff=0.2954;MQ=68.16;MQ0=14;MQRankSum=-3.616;QD=4.88;ReadPosRankSum=-1.912;VQSLOD=-0.1739;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:10,9:19:6:55,6,0	./.	0/0:43,0:12:6.64:0,7,62	0/0:43,0:10:4.45:0,4,16	0/0:14,0:14:9.94:0,10,58	0/0:17,0:14:22.69:0,23,140	0/0:16,0:16:13.90:0,14,76	1/1:7,0:7:5.93:39,6,0	1/1:0,6:6:3.01:32,3,0	1/1:5,0:9:8.76:51,9,0	1/1:0,1:6:5.93:48,6,0	1/1:2,2:4:3.01:32,3,0	./.	0/0:3,0:3:2.98:0,3,25	./.	1/1:0,4:5:3:27,3,0	1/1:5,8:17:23.48:175,23,0	0/1:5,3:8:10.45:80,0,10	1/1:6,0:5:4.81:28,5,0	./.	1/1:1,2:3:3.01:32,3,0	1/1:3,1:4:5.85:44,6,0	0/1:5,4:10:18.63:26,0,19	1/1:6,2:7:3:29,3,0	0/1:6,3:9:9.11:97,0,9	0/1:10,0:11:16.07:23,0,16	1/1:3,0:5:5.72:29,6,0	1/1:3,0:8:5.68:28,6,0
chr10	15346860	.	A	AT	777.88	PASS	AB=0.859;AC=17;AF=0.304;AN=56;BaseQRankSum=0.085;DP=322;FS=4.059;HRun=10;HaplotypeScore=55.5708;InbreedingCoeff=0.5460;MQ=76.72;MQ0=6;MQRankSum=-1.503;QD=8.02;ReadPosRankSum=1.615;VQSLOD=1.7284;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:22:18.54:0,19,153	0/0:6,0:6:14.93:0,15,115	0/0:48,0:16:12.65:0,13,168	0/0:41,0:14:7.05:0,7,51	1/1:5,12:18:34.18:313,34,0	0/1:7,7:12:1.67:174,0,2	1/1:2,10:11:14.97:146,15,0	0/0:9,0:9:23.92:0,24,185	0/0:6,0:6:6.87:0,7,49	0/0:13,0:13:23.03:0,23,187	0/0:7,0:7:12.87:0,13,99	0/0:5,0:5:8.91:0,9,66	0/0:3,0:3:5.98:0,6,46	0/0:3,0:3:5.99:0,6,49	1/1:2,0:3:2.92:17,3,0	0/1:5,0:5:0:0,0,0	0/0:16,0:16:6.30:0,6,96	1/1:0,1:11:14.40:78,14,0	0/1:5,3:8:32.21:72,0,32	1/1:3,6:9:15.16:93,15,0	1/1:0,5:5:3.95:31,4,0	0/0:4,0:4:5.05:0,5,41	0/0:12,0:12:20.21:0,20,153	0/1:3,0:3:0:0,0,0	0/0:8,0:9:13.31:0,13,105	0/1:7,0:9:24.05:24,0,75	0/0:6,0:5:8.78:0,9,68	0/0:14,0:14:19.80:0,20,137
chr10	15347973	.	CT	C	2362.55	PASS	AB=0.950;AC=20;AF=0.357;AN=56;BaseQRankSum=7.424;DP=494;FS=2.409;HRun=12;HaplotypeScore=52.2907;InbreedingCoeff=0.8308;MQ=68.02;MQ0=1;MQRankSum=1.846;QD=13.27;ReadPosRankSum=2.183;VQSLOD=3.8691;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:72.11:0,72,713	0/0:10,0:10:27.05:0,27,274	0/1:13,0:12:1.69:2,0,66	0/0:10,0:10:5.99:0,6,50	1/1:2,19:21:47.76:371,48,0	1/1:2,21:23:47.79:371,48,0	1/1:2,10:13:25.93:192,26,0	0/0:32,2:33:39.91:0,40,610	0/0:25,2:27:42.85:0,43,601	0/0:13,0:14:29.89:0,30,288	0/0:15,0:15:32.98:0,33,321	0/0:13,0:13:33.07:0,33,335	0/0:16,0:16:39.07:0,39,391	0/0:21,0:21:47.96:0,48,456	1/1:1,13:14:32.86:255,33,0	1/1:2,13:15:32.86:255,33,0	0/0:27,0:27:54.56:0,55,541	1/1:2,20:22:40.92:402,41,0	1/1:6,15:22:46.77:343,47,0	1/1:1,11:12:23.88:186,24,0	1/1:5,8:14:25.92:189,26,0	0/0:8,1:9:0.81:0,1,190	0/1:8,1:9:2.19:2,0,162	0/0:19,0:19:39.07:0,39,391	0/0:17,0:18:53.93:0,54,524	0/0:23,0:23:54.11:0,54,548	0/0:20,0:20:54.10:0,54,542	0/0:9,1:10:3.81:0,4,215
chr10	15349605	.	TCACACACCCAAGTC	T	1125.17	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=2.078;DP=429;FS=24.080;HRun=0;HaplotypeScore=161.7690;InbreedingCoeff=0.9100;MQ=94.29;MQ0=3;MQRankSum=-5.684;QD=66.19;ReadPosRankSum=-1.275;VQSLOD=1.1357;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:61.36:0,61,4087	0/0:8,0:8:24.08:0,24,1399	0/0:46,0:32:96.33:0,96,4540	0/0:30,0:23:45.76:0,46,2123	1/1:1,6:7:12.04:507,12,0	1/1:0,1:4:12.04:487,12,0	1/1:0,6:6:5.86:257,6,0	0/0:23,0:23:64.10:0,64,3711	0/0:10,0:10:21.07:0,21,1236	0/0:25,0:25:58.84:0,59,3785	0/0:11,0:11:30.07:0,30,1664	0/0:9,0:9:27.09:0,27,1691	0/0:8,0:8:24.08:0,24,1418	0/0:7,0:7:21.07:0,21,1315	0/0:20,0:20:60.18:0,60,3071	0/0:10,0:10:30.09:0,30,1558	0/0:24,0:24:65.44:0,65,3769	0/0:16,0:16:39.13:0,39,2454	0/0:15,0:15:45.14:0,45,2412	0/0:11,0:11:29.90:0,30,1653	0/0:11,0:11:26.23:0,26,1278	0/0:14,0:14:42.14:0,42,2488	0/0:15,0:15:45.15:0,45,2649	0/0:11,0:11:24.05:0,24,1391	0/0:21,0:21:63.22:0,63,3890	0/0:15,0:15:45.15:0,45,2416	0/0:16,0:15:41.82:0,42,2220	0/0:4,0:4:9.03:0,9,509
chr10	15350297	.	T	TA	439.12	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=4.219;DP=421;FS=1.639;HRun=0;HaplotypeScore=55.9869;InbreedingCoeff=0.6761;MQ=61.39;MQ0=15;MQRankSum=-0.108;QD=6.55;ReadPosRankSum=0.225;VQSLOD=3.3599;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:24:60.20:0,60,818	0/0:7,0:7:21.07:0,21,275	0/1:15,0:7:14.63:15,0,53	0/0:9,0:3:8.60:0,9,58	1/1:11,10:21:2.64:185,3,0	1/1:8,8:16:6.68:194,7,0	1/1:6,8:15:14.79:174,15,0	0/0:22,0:19:45.14:0,45,596	0/0:8,0:8:24.07:0,24,320	0/0:18,0:18:54.14:0,54,682	0/0:14,0:14:39.13:0,39,545	0/0:18,0:18:45.13:0,45,593	0/0:11,0:11:27.09:0,27,375	0/0:12,0:12:33.11:0,33,455	0/0:9,0:9:27.01:0,27,337	0/0:13,0:13:36.11:0,36,469	0/0:26,0:25:69.05:0,69,891	0/0:27,0:26:75.24:0,75,1015	0/0:21,0:20:56.47:0,56,440	0/0:21,0:21:47.90:0,48,393	0/0:8,0:8:23.94:0,24,196	0/0:4,0:4:12.03:0,12,153	0/0:3,0:3:5.86:0,6,38	0/0:18,0:17:35.55:0,36,200	0/0:13,0:13:34:0,34,463	0/0:20,0:20:57.18:0,57,778	0/0:18,0:18:54.09:0,54,689	0/0:9,0:8:24.04:0,24,302
chr10	15350708	.	AT	A	2989.07	PASS	AB=0.923;AC=20;AF=0.357;AN=56;BaseQRankSum=10.889;DP=515;FS=0.827;HRun=10;HaplotypeScore=56.3573;InbreedingCoeff=0.8410;MQ=72.20;MQ0=0;MQRankSum=-1.082;QD=16.24;ReadPosRankSum=1.185;VQSLOD=3.9278;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:27:75.02:0,75,802	0/0:8,0:8:12.01:0,12,121	0/1:9,2:10:37:37,0,82	0/1:12,0:10:14.79:15,0,62	1/1:6,28:34:74.95:651,75,0	1/1:5,13:18:32.96:286,33,0	1/1:2,10:12:26.99:234,27,0	0/0:25,0:25:57.15:0,57,631	0/0:16,0:16:33.09:0,33,365	0/0:33,1:34:64.19:0,64,931	0/0:17,0:17:45.12:0,45,498	0/0:10,0:10:27.06:0,27,290	0/0:9,0:9:24.06:0,24,258	0/0:22,0:22:63.15:0,63,687	1/1:3,8:11:23.99:208,24,0	1/1:1,19:20:50.99:443,51,0	0/0:27,0:27:51.14:0,51,564	1/1:2,12:14:35.98:312,36,0	1/1:3,13:17:40.97:344,41,0	1/1:5,19:24:47.92:412,48,0	1/1:0,11:11:29.99:260,30,0	0/0:19,0:19:51.14:0,51,564	0/0:21,0:21:53.95:0,54,559	0/0:17,0:17:48.10:0,48,510	0/0:26,1:27:40.08:0,40,657	0/0:18,0:18:42.10:0,42,457	0/0:23,0:24:65.99:0,66,695	0/0:10,0:10:24.06:0,24,265
chr10	15351344	.	AGAGGAAGAG	A	1396.24	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=5.202;DP=532;FS=0.682;HRun=0;HaplotypeScore=144.0209;InbreedingCoeff=0.9674;MQ=60.87;MQ0=8;MQRankSum=-3.788;QD=28.49;ReadPosRankSum=-1.882;VQSLOD=2.6878;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:51.10:0,51,1631	0/0:6,0:6:14.97:0,15,369	0/0:26,0:11:12.03:0,12,366	0/0:34,0:17:15.30:0,15,670	0/0:21,0:21:54.05:0,54,1598	0/0:18,0:18:51.16:0,51,1753	0/0:23,0:23:60.17:0,60,1878	0/0:29,0:28:69.19:0,69,1949	0/0:13,0:13:36.12:0,36,1553	0/0:21,0:21:57.16:0,57,2059	0/0:19,0:19:42.08:0,42,1584	0/0:15,0:15:36.09:0,36,1235	0/0:11,0:11:30.08:0,30,1068	0/0:18,0:18:54.14:0,54,1939	0/0:22,0:21:51.17:0,51,2055	0/0:17,0:17:42.13:0,42,1511	0/0:21,0:21:54.08:0,54,1690	0/0:21,0:21:16.01:0,16,2041	1/1:4,14:16:38.95:645,39,0	1/1:6,14:18:26.95:529,27,0	1/1:11,0:11:21.02:365,21,0	0/0:9,0:9:18.01:0,18,531	0/0:23,0:23:51.14:0,51,2006	0/0:17,0:17:39.13:0,39,1630	0/0:20,0:20:51.06:0,51,1548	0/0:11,0:11:21.07:0,21,883	0/0:25,0:25:66.12:0,66,2219	0/0:15,0:15:33.09:0,33,1234
chr10	15351381	.	AAGG	A	1913.28	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.426;DP=508;FS=0.000;HRun=0;HaplotypeScore=89.7935;InbreedingCoeff=0.9941;MQ=68.46;MQ0=5;MQRankSum=-5.813;QD=33.57;ReadPosRankSum=-1.614;VQSLOD=3.5095;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:55.71:0,56,936	0/0:8,0:8:24.04:0,24,469	0/0:33,0:16:32.28:0,32,485	0/0:45,0:24:43.78:0,44,618	1/1:3,14:17:41.64:427,42,0	1/1:6,14:20:57.12:854,57,0	1/1:8,12:20:52.35:775,52,0	0/0:30,0:30:78.22:0,78,1439	0/0:12,0:12:36.06:0,36,691	0/0:20,0:20:54.09:0,54,980	0/0:17,0:17:42.14:0,42,966	0/0:16,0:16:48.10:0,48,884	0/0:9,0:9:26.98:0,27,498	0/0:14,0:14:39.12:0,39,856	0/0:15,0:14:45.12:0,45,889	0/0:18,0:18:54.15:0,54,1121	0/0:16,0:16:36.06:0,36,694	0/0:26,0:26:71.12:0,71,1554	0/0:14,0:14:39.09:0,39,648	0/0:16,0:15:37.57:0,38,635	0/0:9,0:9:18.06:0,18,396	0/0:11,0:11:21.07:0,21,452	0/0:17,0:17:39.06:0,39,760	0/0:17,0:17:45.08:0,45,905	0/0:17,0:17:48.09:0,48,936	0/0:11,0:11:33.10:0,33,680	0/0:16,0:16:48.13:0,48,954	0/0:21,0:21:57.16:0,57,1262
chr10	15351410	.	A	AAG	1660.23	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=4.896;DP=506;FS=8.373;HRun=0;HaplotypeScore=81.5968;InbreedingCoeff=0.8279;MQ=78.01;MQ0=2;MQRankSum=-3.487;QD=18.65;ReadPosRankSum=-1.266;VQSLOD=2.9835;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:48.19:0,48,818	0/0:8,0:8:24.07:0,24,298	0/0:43,0:32:39.05:0,39,638	0/1:43,0:27:31.86:32,0,278	1/1:2,11:13:24.01:370,24,0	1/1:1,16:17:48.16:804,48,0	1/1:3,13:16:36.12:604,36,0	0/0:41,0:41:99:0,111,1362	0/0:12,0:12:36.12:0,36,463	0/0:17,0:17:48.10:0,48,579	0/0:18,0:18:35.76:0,36,438	0/0:15,0:15:39.03:0,39,453	0/0:9,0:9:27.08:0,27,335	0/0:11,0:11:30.09:0,30,375	0/0:18,0:18:51.12:0,51,628	0/0:17,0:17:45.15:0,45,581	0/0:21,0:21:54.16:0,54,682	0/0:22,0:22:48.16:0,48,616	0/0:12,0:12:27.05:0,27,328	0/0:14,0:14:36.11:0,36,452	0/0:10,0:10:18.06:0,18,231	0/0:7,0:7:18.06:0,18,232	0/0:9,0:9:18.06:0,18,231	0/0:20,0:20:48.10:0,48,587	0/0:16,0:16:33.10:0,33,414	0/0:11,0:11:33.11:0,33,425	0/0:15,0:15:39.07:0,39,483	0/0:23,0:23:63.15:0,63,744
chr10	15351723	.	T	TA	603.54	PASS	AB=0.929;AC=7;AF=0.125;AN=56;BaseQRankSum=-1.903;DP=419;FS=0.000;HRun=12;HaplotypeScore=50.6784;InbreedingCoeff=0.7087;MQ=66.52;MQ0=9;MQRankSum=0.112;QD=9.58;ReadPosRankSum=2.332;VQSLOD=2.3899;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:26:59.57:0,60,434	0/0:11,0:11:23.79:0,24,173	0/0:19,0:11:8.31:0,8,56	0/0:11,0:7:5.76:0,6,36	0/0:23,0:23:21.55:0,22,316	0/0:20,1:21:18.28:0,18,287	0/0:10,0:9:23.86:0,24,175	0/0:29,0:27:70.97:0,71,511	0/0:17,0:17:41.75:0,42,306	0/0:23,0:23:53.66:0,54,393	0/0:13,0:12:32.78:0,33,239	0/0:12,0:11:0.68:0,1,167	0/0:13,0:13:35.78:0,36,261	0/0:7,0:7:17.87:0,18,131	1/1:6,11:16:24.04:231,24,0	1/1:2,7:11:17.70:145,18,0	0/0:17,1:17:18.56:0,19,299	1/1:8,13:21:41.55:365,42,0	0/0:14,0:15:37.80:0,38,268	0/0:11,0:11:25.87:0,26,180	0/0:5,0:5:8.92:0,9,66	0/0:3,0:3:5.97:0,6,44	0/0:9,0:9:26.85:0,27,197	0/0:5,0:5:8.95:0,9,66	0/0:21,0:20:38.63:0,39,282	0/1:12,1:12:3.10:3,0,133	0/0:17,0:17:41.66:0,42,300	0/0:16,0:16:32.75:0,33,240
chr10	15351822	.	G	GAGAGAGAA	1301.12	PASS	AB=1.000;AC=14;AF=0.250;AN=56;BaseQRankSum=4.645;DP=485;FS=0.000;HRun=0;HaplotypeScore=131.1573;InbreedingCoeff=0.2192;MQ=60.26;MQ0=11;MQRankSum=-1.889;QD=7.15;ReadPosRankSum=-2.791;VQSLOD=1.8898;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:24:20.30:0,20,295	0/1:6,0:6:4.55:5,0,97	0/0:13,0:6:2.94:0,3,29	0/0:30,0:13:16.36:0,16,136	1/1:2,19:24:29.66:199,30,0	1/1:4,13:22:15.52:578,16,0	1/1:2,16:18:14.88:209,15,0	0/0:26,0:25:43.60:0,44,389	0/0:11,0:11:14.98:0,15,123	0/0:21,0:21:44.39:0,44,392	0/0:18,0:17:32.35:0,32,261	0/1:12,0:12:33.39:33,0,106	0/1:14,0:14:60.54:61,0,155	0/1:14,0:14:40.73:41,0,126	0/0:12,0:11:19.38:0,19,185	0/0:10,0:10:24:0,24,270	0/1:23,0:23:99:111,0,198	0/0:15,0:15:26.74:0,27,236	0/0:12,0:12:25.96:0,26,190	0/1:15,0:14:51.24:51,0,86	0/1:16,0:16:53.64:54,0,186	0/0:15,0:15:31.95:0,32,273	0/0:21,0:21:36.35:0,36,319	0/1:18,0:18:99:131,0,138	0/0:16,0:15:16.50:0,17,142	0/0:26,0:24:55.97:0,56,533	0/0:19,0:19:32.72:0,33,318	0/0:13,0:11:22.22:0,22,191
chr10	15352216	.	AG	A	3894.39	PASS	AB=0.958;AC=38;AF=0.679;AN=56;BaseQRankSum=5.036;DP=482;FS=10.585;HRun=1;HaplotypeScore=75.4488;InbreedingCoeff=0.8279;MQ=43.46;MQ0=18;MQRankSum=-6.543;QD=11.95;ReadPosRankSum=-3.660;VQSLOD=0.0871;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:39:35.51:0,36,568	1/1:10,0:10:10.61:134,11,0	0/1:10,1:3:10.78:11,0,36	0/1:10,0:5:5.21:5,0,13	1/1:20,3:22:48.64:384,49,0	1/1:18,1:19:52.85:419,53,0	1/1:16,0:15:24.76:213,25,0	1/1:28,0:24:54.38:327,54,0	1/1:7,2:6:11.39:66,11,0	1/1:17,2:19:48.06:288,48,0	1/1:18,0:16:33.22:189,33,0	0/0:25,0:25:32.74:0,33,388	0/0:20,0:17:28.52:0,29,252	0/0:13,0:12:35.78:0,36,298	1/1:12,0:11:9.86:77,10,0	1/1:14,0:13:22.03:140,22,0	1/1:20,0:15:28.97:201,29,0	1/1:16,2:13:26.69:164,27,0	1/1:21,0:18:45.09:297,45,0	1/1:10,0:10:17.22:97,17,0	1/1:5,0:4:7.63:39,8,0	0/0:14,0:13:28.69:0,29,293	0/0:9,0:9:16.72:0,17,135	0/0:15,0:15:18.47:0,18,216	0/0:20,0:19:45.95:0,46,374	1/1:27,0:27:70.35:449,70,0	1/1:20,1:21:45.74:287,46,0	1/1:14,1:14:16.35:109,16,0
chr10	15352253	.	TCCAAGGACATGGGGACC	T	18159.18	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=14.997;DP=439;FS=3.508;HRun=0;HaplotypeScore=205.6715;InbreedingCoeff=0.9694;MQ=71.57;MQ0=0;MQRankSum=-14.163;QD=84.07;ReadPosRankSum=1.429;VQSLOD=4.7793;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:84.29:0,84,6042	1/1:1,5:6:12.04:584,12,0	0/0:13,0:12:33.11:0,33,2112	0/0:11,0:10:23.87:0,24,1272	0/0:20,0:20:54.19:0,54,4396	0/0:18,0:18:54.19:0,54,4205	0/0:16,0:16:45.15:0,45,3214	1/1:3,20:23:57.18:1756,57,0	1/1:0,6:6:12.04:584,12,0	1/1:3,10:13:33.11:1562,33,0	1/1:1,16:17:33.11:1528,33,0	0/0:17,0:17:48.16:0,48,3787	0/0:16,0:16:48.16:0,48,3833	0/0:22,0:22:60.21:0,60,4719	1/1:0,8:8:12.04:584,12,0	1/1:0,12:12:27.09:1314,27,0	1/1:2,18:20:21.07:1022,21,0	1/1:1,12:13:30.08:1201,30,0	1/1:2,21:23:63.18:1968,63,0	1/1:1,10:11:15.05:730,15,0	1/1:0,9:9:6.02:292,6,0	0/0:18,0:18:48.16:0,48,3622	0/0:10,0:10:30.10:0,30,2450	0/0:10,0:10:30.10:0,30,1932	0/0:19,0:19:54.16:0,54,4085	1/1:1,18:19:51.17:2064,51,0	1/1:0,17:17:30.10:1460,30,0	1/1:1,18:19:33.11:1512,33,0
chr10	15352738	.	AT	A	1306.08	PASS	AB=0.667;AC=11;AF=0.196;AN=56;BaseQRankSum=6.775;DP=507;FS=4.616;HRun=11;HaplotypeScore=55.7468;InbreedingCoeff=0.8505;MQ=65.54;MQ0=4;MQRankSum=0.126;QD=12.80;ReadPosRankSum=3.394;VQSLOD=3.5643;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,1:32:50.46:0,50,713	0/0:5,0:5:12:0,12,117	0/0:8,0:8:15.03:0,15,153	0/0:13,0:13:24.01:0,24,232	1/1:2,14:16:32.93:271,33,0	1/1:4,13:17:40.97:326,41,0	1/1:1,18:19:44.93:369,45,0	0/0:31,0:29:75.12:0,75,773	0/0:12,1:13:5.44:0,5,263	0/0:23,0:23:42.08:0,42,434	0/0:13,0:13:30.05:0,30,306	0/0:9,0:9:24.01:0,24,232	0/0:15,0:15:33.08:0,33,352	0/0:16,0:16:30.08:0,30,320	0/0:21,1:22:29.39:0,29,492	0/0:20,0:19:42.11:0,42,448	0/0:33,0:34:87:0,87,889	0/0:28,1:29:41.49:0,41,630	0/1:7,7:14:8.02:148,0,8	1/1:5,13:18:23.93:197,24,0	1/1:6,11:17:20.92:172,21,0	0/0:6,0:7:14.87:0,15,131	0/0:21,0:21:42.08:0,42,434	0/0:12,1:13:8.28:0,8,265	0/0:19,0:20:57.02:0,57,560	0/0:29,0:28:57.02:0,57,567	0/0:24,0:24:57.14:0,57,607	0/0:5,0:6:17.88:0,18,174
chr10	15353711	.	GA	G	2018.73	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.864;DP=605;FS=1.782;HRun=2;HaplotypeScore=61.8332;InbreedingCoeff=0.9934;MQ=87.13;MQ0=0;MQRankSum=-1.626;QD=34.81;ReadPosRankSum=0.638;VQSLOD=3.9495;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:87.30:0,87,1386	0/0:6,0:6:15.05:0,15,240	0/0:20,0:20:48.16:0,48,827	0/0:22,0:22:56.09:0,56,873	1/1:0,18:18:51.17:707,51,0	1/1:0,19:19:51.17:700,51,0	1/1:0,21:21:54.18:755,54,0	0/0:25,0:24:72.21:0,72,1102	0/0:19,0:19:57.18:0,57,885	0/0:24,0:24:72.23:0,72,1127	0/0:10,0:10:30.10:0,30,478	0/0:20,0:20:60.20:0,60,957	0/0:33,0:33:96.30:0,96,1483	0/0:24,0:24:72.24:0,72,1125	0/0:23,0:23:69.21:0,69,1058	0/0:20,0:20:60.20:0,60,959	0/0:26,0:26:75.26:0,75,1199	0/0:27,0:27:72.23:0,72,1151	0/0:15,0:15:45.15:0,45,719	0/0:15,0:15:45.15:0,45,717	0/0:38,0:38:99:0,111,1760	0/0:14,0:14:42.14:0,42,672	0/0:18,0:18:54.18:0,54,863	0/0:34,0:34:99:0,102,1628	0/0:24,0:24:72.25:0,72,1151	0/0:20,0:20:60.20:0,60,939	0/0:33,0:33:99:0,99,1582	0/0:8,0:8:24.08:0,24,384
chr10	15353842	.	C	CA	3193.61	PASS	AB=0.697;AC=29;AF=0.518;AN=56;BaseQRankSum=-5.662;DP=504;FS=2.495;HRun=13;HaplotypeScore=61.8547;InbreedingCoeff=0.6716;MQ=64.12;MQ0=0;MQRankSum=-2.056;QD=11.17;ReadPosRankSum=0.088;VQSLOD=3.2832;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:53.29:0,53,364	1/1:1,4:5:6.01:56,6,0	0/0:15,0:9:14.24:0,14,82	0/0:11,0:6:5.77:0,6,37	0/0:15,0:15:33.78:0,34,216	0/1:12,2:16:18.91:19,0,158	0/0:21,0:21:35.61:0,36,246	1/1:17,15:32:25.28:480,25,0	1/1:4,4:8:11.98:103,12,0	1/1:6,6:12:12.01:112,12,0	0/1:6,17:24:14.77:274,0,15	0/0:14,0:14:29.64:0,30,205	0/0:17,0:18:43.35:0,43,284	0/0:17,0:17:35.55:0,36,246	1/1:3,16:19:30.03:279,30,0	1/1:5,13:18:6.45:202,6,0	1/1:5,13:18:6.47:202,6,0	1/1:6,13:21:41.56:349,42,0	0/1:7,10:17:15.49:120,0,15	1/1:2,9:13:18.75:147,19,0	1/1:3,7:11:23.77:191,24,0	0/0:20,0:20:15.54:0,16,222	0/0:16,0:17:9.90:0,10,204	0/0:19,0:19:47.58:0,48,329	0/0:20,2:22:0.78:0,1,291	1/1:6,17:25:15.53:397,16,0	1/1:7,14:21:9.41:222,9,0	1/1:9,16:25:27.03:251,27,0
chr10	15354541	.	A	AT	1926.84	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=10.094;DP=594;FS=4.655;HRun=8;HaplotypeScore=71.1986;InbreedingCoeff=0.9926;MQ=75.01;MQ0=0;MQRankSum=-0.307;QD=27.93;ReadPosRankSum=0.640;VQSLOD=4.2822;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:68.99:0,69,619	0/0:8,0:8:24.01:0,24,220	0/0:14,0:14:24.58:0,25,179	0/0:13,0:13:26.73:0,27,211	1/1:2,28:30:81.19:913,81,0	1/1:2,22:24:60.17:689,60,0	1/1:1,14:15:42.07:467,42,0	0/0:32,0:32:84.02:0,84,762	0/0:14,0:14:42.02:0,42,384	0/0:30,0:30:81:0,81,728	0/0:25,0:25:57:0,57,517	0/0:19,0:19:48:0,48,431	0/0:24,0:24:66.03:0,66,604	0/0:21,0:21:51.01:0,51,466	0/0:22,0:22:60.01:0,60,544	0/0:22,0:22:66.04:0,66,604	0/0:21,0:21:60.03:0,60,549	0/0:18,0:18:15.41:0,15,373	0/0:22,0:22:44.97:0,45,400	0/0:25,0:25:69.04:0,69,632	0/0:18,0:18:38.98:0,39,349	0/0:17,0:17:51.03:0,51,467	0/0:17,0:17:45.01:0,45,407	0/0:13,0:13:26.99:0,27,242	0/0:15,0:15:42:0,42,379	0/0:32,0:32:84.04:0,84,769	0/0:34,0:34:90.04:0,90,820	0/0:23,0:23:66:0,66,592
chr10	15354902	.	A	AG	1886.02	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=4.709;DP=582;FS=10.387;HRun=2;HaplotypeScore=57.7128;InbreedingCoeff=0.9982;MQ=75.76;MQ0=0;MQRankSum=-1.910;QD=36.27;ReadPosRankSum=0.051;VQSLOD=3.4361;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:90.27:0,90,1103	0/0:7,0:7:21.07:0,21,260	0/0:24,0:24:65.83:0,66,803	0/0:14,0:14:39.08:0,39,439	1/1:1,19:21:57.19:820,57,0	1/1:0,17:17:51.17:734,51,0	1/1:1,13:14:33.11:475,33,0	0/0:32,0:32:84.26:0,84,1040	0/0:17,0:17:45.14:0,45,558	0/0:30,0:30:90.28:0,90,1116	0/0:19,0:19:57.18:0,57,701	0/0:26,0:26:72.23:0,72,892	0/0:18,0:18:51.15:0,51,620	0/0:26,0:26:78.25:0,78,967	0/0:22,0:22:60.19:0,60,744	0/0:13,0:13:36.10:0,36,434	0/0:26,0:26:75.20:0,75,900	0/0:14,0:14:42.11:0,42,506	0/0:19,0:19:54.17:0,54,670	0/0:24,0:24:66.20:0,66,810	0/0:11,0:11:33.10:0,33,409	0/0:18,0:18:54.17:0,54,668	0/0:19,0:19:54.17:0,54,667	0/0:29,0:29:81.25:0,81,1004	0/0:23,0:23:69.21:0,69,842	0/0:28,0:28:84.26:0,84,1032	0/0:27,0:27:81.25:0,81,1004	0/0:11,0:11:33.10:0,33,409
chr10	15355566	.	CT	C	967.81	PASS	AB=0.882;AC=7;AF=0.125;AN=56;BaseQRankSum=7.203;DP=542;FS=1.891;HRun=10;HaplotypeScore=54.2404;InbreedingCoeff=0.8573;MQ=79.29;MQ0=0;MQRankSum=-0.028;QD=14.44;ReadPosRankSum=1.518;VQSLOD=3.7983;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,99,1081	0/0:13,0:13:30.08:0,30,332	0/0:17,0:17:21.01:0,21,211	0/1:13,1:14:5.10:5,0,146	1/1:2,23:25:59.29:587,59,0	1/1:2,9:11:20.98:182,21,0	1/1:1,15:16:38.99:339,39,0	0/0:20,0:20:51.11:0,51,548	0/0:22,0:22:66.18:0,66,730	0/0:31,0:32:72.02:0,72,770	0/0:18,0:18:13.22:0,13,372	0/0:21,0:21:60.15:0,60,657	0/0:14,0:14:39.11:0,39,431	0/0:25,0:26:60:0,60,645	0/0:17,1:18:19.07:0,19,439	0/0:15,0:15:42.08:0,42,453	0/0:24,1:25:46.11:0,46,726	0/0:18,0:18:36.10:0,36,398	0/0:23,0:23:62.93:0,63,659	0/0:22,0:22:63.16:0,63,689	0/0:11,0:11:27.07:0,27,299	0/0:25,0:25:61.03:0,61,657	0/0:17,0:17:48.13:0,48,530	0/0:17,0:17:48.13:0,48,531	0/0:9,0:9:18.05:0,18,199	0/0:27,1:29:36.95:0,37,619	0/0:14,0:14:36.08:0,36,389	0/0:12,0:12:33.07:0,33,355
chr10	15357902	.	C	CGATA	5387.53	PASS	AB=0.722;AC=32;AF=0.615;AN=52;BaseQRankSum=-8.591;DP=611;FS=1.257;HRun=0;HaplotypeScore=119.2969;InbreedingCoeff=0.6974;MQ=68.79;MQ0=8;MQRankSum=0.609;QD=16.23;ReadPosRankSum=-2.325;VQSLOD=4.3341;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:21,10:31:31.09:266,0,31	1/1:2,0:3:1.82:5,2,0	./.	./.	1/1:27,0:27:24.08:430,24,0	1/1:12,0:12:18.06:322,18,0	1/1:19,0:19:3.01:53,3,0	0/0:27,0:27:0.47:0,0,1	0/0:14,0:26:29.62:0,30,258	0/0:17,0:26:24.47:0,24,233	0/0:8,0:25:35.74:0,36,333	0/1:12,10:22:28.05:332,0,28	1/1:11,7:19:15.05:351,15,0	1/1:3,6:11:12.04:281,12,0	1/1:12,13:25:24.08:561,24,0	1/1:9,12:22:21.07:491,21,0	0/0:16,0:35:8.72:0,9,326	1/1:10,6:17:12.04:280,12,0	1/1:19,0:19:18.06:299,18,0	1/1:12,1:23:15.01:246,15,0	1/1:20,0:20:2.81:70,3,0	0/0:11,0:11:18.05:0,18,254	1/1:7,11:19:27.03:629,27,0	1/1:10,11:21:17.98:421,18,0	1/1:12,8:20:15.05:351,15,0	0/0:13,0:24:30.40:0,30,262	0/0:22,0:32:18.04:0,18,190	0/0:4,0:13:23.98:0,24,214
chr10	15357943	.	G	GATAA	3869.89	PASS	AB=0.964;AC=17;AF=0.304;AN=56;BaseQRankSum=2.744;DP=598;FS=1.893;HRun=0;HaplotypeScore=119.6699;InbreedingCoeff=-0.1279;MQ=64.33;MQ0=15;MQRankSum=1.449;QD=12.65;ReadPosRankSum=2.744;VQSLOD=2.8539;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:29:99:128,0,323	0/0:8,0:8:23.78:0,24,179	0/0:19,0:6:14.94:0,15,127	0/0:35,0:14:2.68:0,3,76	1/1:1,22:26:71.62:971,72,0	1/1:1,12:14:21.03:504,21,0	0/1:2,14:16:12.04:109,0,12	0/0:32,0:31:35.35:0,35,544	0/0:21,0:21:51.06:0,51,523	0/0:19,0:17:45.09:0,45,498	0/0:26,0:26:57.03:0,57,600	0/1:19,0:19:99:203,0,119	0/1:13,0:13:84.89:197,0,85	0/1:15,0:15:52.90:162,0,53	0/1:25,0:25:99:307,0,193	0/1:21,0:21:99:274,0,133	0/0:33,0:33:70:0,70,731	0/1:17,0:17:99:158,0,135	0/0:21,0:19:2.36:0,2,282	0/1:30,0:29:68.22:68,0,246	0/1:19,0:19:20.22:20,0,168	0/0:17,0:17:48.02:0,48,580	0/1:25,0:24:99:347,0,187	0/1:19,0:19:99:230,0,155	0/1:18,0:18:99:192,0,134	0/0:21,0:21:60.11:0,60,626	0/0:23,0:22:56.50:0,57,523	0/0:17,0:17:45.02:0,45,452
chr10	15358111	.	TAAAAAAAAA	T	5246.30	PASS	AB=0.594;AC=14;AF=0.269;AN=52;BaseQRankSum=10.058;DP=437;FS=0.494;HRun=20;HaplotypeScore=120.8803;InbreedingCoeff=0.7195;MQ=53.38;MQ0=8;MQRankSum=-9.210;QD=40.05;ReadPosRankSum=8.874;VQSLOD=0.8199;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:9,14:23:58.17:683,0,58	0/0:2,0:3:6.02:0,6,216	0/0:19,0:7:12.02:0,12,278	0/0:18,0:6:9.02:0,9,182	0/0:19,0:35:93.31:0,93,3254	0/0:5,0:11:12.04:0,12,458	0/0:12,0:11:30.10:0,30,1267	0/0:28,0:33:72.25:0,72,2467	0/0:10,0:11:30.10:0,30,822	0/0:18,0:22:60.21:0,60,2083	0/0:23,0:25:57.15:0,57,1838	1/1:1,17:19:51.06:1134,51,0	1/1:4,10:14:26.81:632,27,0	1/1:1,12:14:33.10:732,33,0	0/0:17,0:18:45.15:0,45,1849	0/0:10,0:10:18.06:0,18,737	0/0:11,0:16:24.08:0,24,807	0/0:14,0:14:30.10:0,30,1134	./.	0/0:1,0:1:3.01:0,3,66	./.	0/1:4,13:17:11.71:549,0,12	1/1:4,13:17:19.91:552,20,0	1/1:2,4:6:5.98:139,6,0	1/1:5,15:21:35.64:825,36,0	0/0:19,0:20:42.14:0,42,1506	0/0:16,0:20:54.19:0,54,1766	0/0:9,0:12:18.06:0,18,590
chr10	15358889	.	ATG	A	2290.25	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.588;DP=594;FS=1.786;HRun=0;HaplotypeScore=71.6705;InbreedingCoeff=0.9937;MQ=90.43;MQ0=0;MQRankSum=-1.571;QD=39.49;ReadPosRankSum=0.248;VQSLOD=5.0125;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,150,2823	0/0:9,0:9:27.07:0,27,486	0/0:18,0:18:54.18:0,54,1000	0/0:28,0:28:69.21:0,69,1250	1/1:0,15:15:42.14:643,42,0	1/1:1,16:17:45.15:689,45,0	1/1:0,26:26:72.24:1101,72,0	0/0:20,0:20:51.17:0,51,980	0/0:16,0:16:48.16:0,48,926	0/0:21,0:21:57.20:0,57,1102	0/0:11,0:11:33.11:0,33,634	0/0:24,0:24:72.23:0,72,1338	0/0:17,0:17:45.14:0,45,836	0/0:25,0:25:72.25:0,72,1389	0/0:16,0:16:48.16:0,48,927	0/0:18,0:18:54.19:0,54,1033	0/0:39,0:39:99:0,117,2260	0/0:18,0:18:51.17:0,51,984	0/0:16,0:15:48.16:0,48,927	0/0:12,0:12:36.12:0,36,695	0/0:50,0:50:99:0,141,2714	0/0:20,0:20:57.20:0,57,1088	0/0:5,0:5:15.01:0,15,221	0/0:39,0:39:99:0,114,2188	0/0:12,0:12:33.11:0,33,638	0/0:15,0:15:42.14:0,42,810	0/0:23,0:23:66.23:0,66,1273	0/0:14,0:14:42.14:0,42,790
chr10	15361877	.	TC	T	265.03	PASS	AB=0.820;AC=4;AF=0.071;AN=56;BaseQRankSum=7.973;DP=704;FS=0.764;HRun=1;HaplotypeScore=123.4506;InbreedingCoeff=-0.0786;MQ=55.07;MQ0=11;MQRankSum=-7.459;QD=2.52;ReadPosRankSum=1.977;VQSLOD=-0.3218;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:81.23:0,81,1232	0/0:11,0:11:26.80:0,27,413	0/0:46,0:11:27.09:0,27,413	0/0:48,0:15:33.02:0,33,469	0/0:26,0:26:78.23:0,78,1222	0/0:28,0:27:72.25:0,72,1145	0/0:27,0:26:72.22:0,72,1119	0/0:23,0:23:66.19:0,66,1001	0/0:24,0:24:60.05:0,60,946	0/0:25,0:25:75.26:0,75,1201	0/0:30,0:30:72.34:0,72,1282	0/0:14,0:14:39.13:0,39,618	0/0:21,0:21:54.05:0,54,778	0/0:12,0:12:30.09:0,30,451	0/1:23,6:29:99:105,0,952	0/1:11,6:17:99:146,0,453	0/0:20,0:20:55.95:0,56,823	0/1:20,4:24:68.09:68,0,737	0/0:17,1:17:12.04:0,12,623	0/1:29,6:35:55.19:55,0,1224	0/0:7,0:7:18.06:0,18,279	0/0:23,0:23:69.20:0,69,1045	0/0:24,0:24:69.22:0,69,1070	0/0:31,0:31:73.74:0,74,1186	0/0:29,0:29:75.22:0,75,1157	0/0:36,1:36:78.80:0,79,1420	0/0:25,0:25:75.21:0,75,1151	0/0:19,0:19:45.13:0,45,647
chr10	15361880	.	TCCCCCC	T	1121.61	PASS	AB=0.844;AC=6;AF=0.107;AN=56;BaseQRankSum=9.093;DP=688;FS=2.154;HRun=7;HaplotypeScore=178.2214;InbreedingCoeff=-0.1203;MQ=55.29;MQ0=12;MQRankSum=-7.881;QD=7.38;ReadPosRankSum=-0.705;VQSLOD=-0.3370;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:78.25:0,78,2237	0/0:11,0:11:22.01:0,22,789	0/0:41,0:11:27.09:0,27,757	0/0:46,0:13:28.41:0,28,859	0/0:26,0:26:75.24:0,75,2246	0/0:29,0:28:72.25:0,72,2269	0/0:28,0:27:72.25:0,72,2371	0/0:23,0:23:63.22:0,63,2147	0/0:23,0:23:29.87:0,30,1887	0/0:25,0:25:75.25:0,75,2613	0/0:29,0:29:36.95:0,37,2523	0/0:15,0:15:42.13:0,42,1246	0/0:20,0:20:51.16:0,51,1360	0/0:12,0:12:30.09:0,30,898	0/1:22,6:29:99:329,0,2193	0/1:10,6:16:99:319,0,1005	0/0:19,0:19:54.17:0,54,1826	0/1:17,4:22:99:229,0,1491	0/1:16,1:17:56.89:57,0,978	0/1:26,6:32:99:293,0,1866	0/0:7,0:7:18.06:0,18,425	0/0:24,0:24:69.24:0,69,2164	0/0:24,0:24:66.06:0,66,2210	0/0:29,0:29:44.41:0,44,2270	0/0:28,0:28:69.24:0,69,2184	0/1:34,1:35:18.45:18,0,2856	0/0:26,0:26:55.47:0,55,2344	0/0:19,0:18:36.12:0,36,1187
chr10	15361886	.	C	CCTTT	11445.18	PASS	AB=0.689;AC=44;AF=0.846;AN=52;BaseQRankSum=0.292;DP=704;FS=8.099;HRun=0;HaplotypeScore=149.1064;InbreedingCoeff=-0.1846;MQ=54.24;MQ0=12;MQRankSum=-2.242;QD=18.40;ReadPosRankSum=0.362;VQSLOD=4.2171;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:12,14:29:50.89:806,0,51	1/1:6,0:12:15.04:237,15,0	./.	./.	0/1:12,14:26:4.73:735,0,5	1/1:9,18:26:39.13:920,39,0	0/1:15,10:25:47.70:468,0,48	1/1:32,0:32:33.07:512,33,0	1/1:16,0:23:24.07:389,24,0	1/1:19,0:26:15.05:255,15,0	1/1:24,0:29:30.02:368,30,0	0/1:8,6:14:19.74:508,0,20	1/1:8,1:20:34.36:582,34,0	0/1:9,5:14:37.27:125,0,37	1/1:34,0:34:30.24:259,30,0	1/1:18,0:18:25.60:284,26,0	1/1:22,0:23:20.96:249,21,0	1/1:24,0:24:25.92:392,26,0	1/1:19,0:18:13.07:111,13,0	1/1:29,0:29:22.09:232,22,0	1/1:6,0:6:2.98:22,3,0	0/1:9,14:23:4.71:796,0,5	0/1:16,7:23:99:434,0,108	1/1:12,16:28:39.13:875,39,0	0/1:14,12:26:19.14:539,0,19	1/1:29,0:42:45.10:724,45,0	1/1:25,0:31:36.01:529,36,0	1/1:13,0:17:6.02:94,6,0
chr10	15362314	.	AC	A	4315.04	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=9.659;DP=646;FS=8.022;HRun=5;HaplotypeScore=63.6509;InbreedingCoeff=0.9957;MQ=88.67;MQ0=0;MQRankSum=-0.988;QD=26.97;ReadPosRankSum=1.854;VQSLOD=4.8252;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,126,1646	0/0:6,0:6:15.05:0,15,205	0/0:33,0:31:67.22:0,67,919	0/0:19,0:20:41.09:0,41,516	0/0:11,0:11:30.09:0,30,388	0/0:16,0:16:48.14:0,48,639	0/0:26,0:26:69.17:0,69,875	0/0:28,0:28:78.21:0,78,1016	0/0:26,0:26:75.24:0,75,1010	0/0:23,0:23:50.34:0,50,807	0/0:13,0:13:39.09:0,39,487	0/0:28,0:28:84.25:0,84,1109	0/0:20,0:20:57.15:0,57,741	0/0:18,0:18:48.15:0,48,631	1/1:4,29:33:81.23:918,81,0	1/1:2,18:20:48.14:544,48,0	0/0:32,0:32:90.26:0,90,1210	1/1:2,24:26:54.15:612,54,0	1/1:3,20:23:60.09:638,60,0	1/1:1,10:11:30.09:340,30,0	1/1:4,43:47:99:1263,113,0	0/0:22,0:22:63.21:0,63,860	0/0:7,0:7:21.07:0,21,287	0/0:29,0:29:81.16:0,81,1050	0/0:15,0:15:45.14:0,45,597	0/0:26,0:26:72.22:0,72,955	0/0:25,0:23:72.24:0,72,982	0/0:15,0:15:45.09:0,45,549
chr10	15363227	.	ATT	A	506.93	PASS	AB=0.750;AC=5;AF=0.089;AN=56;BaseQRankSum=2.720;DP=377;FS=13.236;HRun=5;HaplotypeScore=64.4948;InbreedingCoeff=0.6422;MQ=62.56;MQ0=7;MQRankSum=-3.992;QD=15.36;ReadPosRankSum=-1.335;VQSLOD=-0.2812;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:39.13:0,39,695	0/0:4,0:4:12.04:0,12,172	0/0:35,0:9:23.43:0,23,241	0/0:27,0:8:13.58:0,14,84	0/0:7,0:7:18.06:0,18,258	0/0:23,0:23:60.20:0,60,911	0/0:5,0:4:12.04:0,12,192	0/0:36,0:36:96.31:0,96,1403	0/0:5,0:5:15.05:0,15,213	0/0:10,0:10:30.10:0,30,452	0/0:8,0:8:24.08:0,24,356	0/0:9,0:9:24.08:0,24,440	0/0:5,0:5:15.05:0,15,270	0/0:10,0:10:27.09:0,27,484	0/0:6,0:6:18.05:0,18,210	0/0:10,0:10:27.88:0,28,294	0/0:33,0:33:84.28:0,84,1211	0/0:30,0:32:80.42:0,80,858	0/1:14,6:19:6.61:403,0,7	1/1:8,0:7:20.55:170,21,0	1/1:3,1:3:5.69:52,6,0	0/0:1,0:1:3.01:0,3,55	0/0:2,0:2:6.02:0,6,110	0/0:8,0:8:24.08:0,24,426	0/0:9,0:9:27.09:0,27,490	0/0:11,0:11:30.10:0,30,448	0/0:13,0:13:38.62:0,39,528	0/0:19,0:18:48.16:0,48,676
chr10	15363230	.	T	TAA	368.45	PASS	AB=0.800;AC=5;AF=0.089;AN=56;BaseQRankSum=5.615;DP=382;FS=7.089;HRun=0;HaplotypeScore=70.7618;InbreedingCoeff=0.5276;MQ=64.03;MQ0=7;MQRankSum=-3.885;QD=11.51;ReadPosRankSum=-0.027;VQSLOD=2.2466;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:39.13:0,39,633	0/0:4,0:4:12.04:0,12,192	0/0:36,0:10:24.17:0,24,324	0/0:28,0:8:14.02:0,14,121	0/0:11,0:11:29.34:0,29,366	0/0:22,0:22:60.20:0,60,955	0/0:5,0:4:12.04:0,12,192	0/0:35,0:34:96.33:0,96,1525	0/0:6,0:6:15.05:0,15,233	0/0:12,0:12:35.14:0,35,520	0/0:9,0:9:26.83:0,27,401	0/0:8,0:8:24.08:0,24,392	0/0:5,0:5:15.05:0,15,245	0/0:9,0:9:27.09:0,27,437	0/0:6,0:6:18.06:0,18,270	0/0:11,0:11:33.09:0,33,448	0/0:31,0:31:84.29:0,84,1345	0/0:32,0:32:87.13:0,87,1196	0/1:15,3:18:33.11:226,0,33	1/1:2,5:7:16:218,16,0	1/1:3,1:3:0.72:36,1,0	0/0:1,0:1:3.01:0,3,49	0/0:3,0:3:6.02:0,6,98	0/0:8,0:8:24.08:0,24,389	0/0:11,0:11:27.09:0,27,440	0/0:10,0:10:30.10:0,30,487	0/0:15,0:15:39.13:0,39,616	0/0:17,0:16:48.16:0,48,771
chr10	15363232	.	T	TA	4204.52	PASS	AB=0.891;AC=32;AF=0.571;AN=56;BaseQRankSum=-6.484;DP=393;FS=0.475;HRun=11;HaplotypeScore=51.9424;InbreedingCoeff=0.6412;MQ=64.99;MQ0=6;MQRankSum=-0.834;QD=14.20;ReadPosRankSum=0.035;VQSLOD=3.5189;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:13,1:14:8.27:0,8,244	1/1:1,4:5:12.03:122,12,0	0/1:35,0:10:10.91:25,0,11	0/1:28,0:9:10.14:10,0,31	1/1:1,12:13:32.84:277,33,0	1/1:6,17:23:1.64:382,2,0	1/1:3,2:4:6.01:61,6,0	1/1:11,24:34:70.96:701,71,0	1/1:0,6:6:15.01:153,15,0	1/1:2,9:12:10.15:253,10,0	0/1:2,7:9:2.29:139,0,2	0/0:8,0:8:20.91:0,21,162	0/0:5,0:5:11.95:0,12,93	0/0:8,0:8:20.92:0,21,162	0/0:6,0:6:14.64:0,15,54	0/1:11,0:11:4.60:5,0,35	1/1:4,27:32:78.01:778,78,0	0/0:32,0:32:28.73:0,29,172	1/1:23,0:20:17.63:164,18,0	1/1:9,0:8:20.04:115,20,0	1/1:4,0:3:5.81:34,6,0	0/0:1,0:1:2.99:0,3,23	0/0:3,0:3:8.96:0,9,68	0/0:8,0:8:17.90:0,18,134	0/0:12,0:12:29.83:0,30,226	1/1:2,9:11:27.04:268,27,0	1/1:3,11:15:26.90:259,27,0	1/1:6,13:18:47.87:459,48,0
chr10	15364433	.	TACACACACAC	T	666.71	PASS	AB=1.000;AC=19;AF=0.413;AN=46;BaseQRankSum=2.140;DP=343;FS=1.139;HRun=0;HaplotypeScore=86.7636;InbreedingCoeff=0.4953;MQ=67.22;MQ0=25;MQRankSum=-1.712;QD=5.09;ReadPosRankSum=2.266;VQSLOD=0.8829;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:22:3:25,3,0	0/0:1,0:1:3.01:0,3,147	./.	./.	0/0:5,0:4:3.01:0,3,133	0/0:16,0:13:14.38:0,14,338	0/0:23,0:23:21.05:0,21,545	0/0:29,0:27:20.69:0,21,305	0/0:14,0:14:18.02:0,18,353	0/0:4,0:4:6.02:0,6,237	0/0:5,0:4:3.01:0,3,44	1/1:5,0:5:3.01:51,3,0	0/1:3,0:3:38.29:54,0,38	1/1:4,3:6:2.96:19,3,0	1/1:2,0:6:5.67:139,6,0	./.	0/0:15,0:22:15.05:0,15,557	1/1:16,0:13:0.75:18,1,0	1/1:14,0:11:9.03:209,9,0	1/1:4,0:3:2.96:19,3,0	0/0:18,0:16:2.04:0,2,6	./.	./.	1/1:32,9:39:8.92:193,9,0	1/1:3,5:6:3.01:88,3,0	0/0:8,0:11:21.05:0,21,777	0/0:8,0:8:6.02:0,6,289	0/0:6,0:8:6.02:0,6,265
chr10	15364596	.	CTTATTTATTTATTTAT	C	616.13	PASS	AC=10;AF=0.833;AN=12;BaseQRankSum=0.751;DP=225;FS=3.522;HRun=0;HaplotypeScore=88.0425;MQ=74.63;MQ0=5;MQRankSum=0.751;QD=11.41;ReadPosRankSum=-0.751;VQSLOD=1.3586;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	./.	./.	1/1:4,0:4:3.01:60,3,0	./.	./.	./.	./.	./.	./.	./.	1/1:6,0:8:3.01:111,3,0	./.	./.	1/1:16,0:15:3:29,3,0	./.	./.	0/0:7,0:7:3.01:0,3,122	./.	./.	./.	./.	1/1:6,2:8:6.02:247,6,0	./.	1/1:17,1:17:9.03:246,9,0
chr10	15365892	.	G	GTATATTTATTTA	971	PASS	AB=0.514;AC=11;AF=0.196;AN=56;BaseQRankSum=-0.424;DP=383;FS=2.308;HRun=0;HaplotypeScore=120.3068;InbreedingCoeff=0.8155;MQ=80.40;MQ0=1;MQRankSum=1.123;QD=14.71;ReadPosRankSum=-0.396;VQSLOD=2.5221;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:57.15:0,57,1575	0/0:8,0:8:24.05:0,24,475	0/0:15,0:14:32.10:0,32,361	0/0:11,0:11:19.93:0,20,270	0/0:14,0:14:42.09:0,42,976	0/0:10,0:20:51:0,51,936	0/0:6,0:6:18.05:0,18,475	0/0:35,0:35:99:0,102,2226	0/0:11,0:11:10.65:0,11,628	0/0:23,0:23:66.18:0,66,1676	0/0:15,0:15:42.02:0,42,1049	0/0:8,0:8:24.05:0,24,349	0/0:10,0:10:30.02:0,30,432	0/0:9,0:9:27.06:0,27,675	1/1:0,4:10:6.02:369,6,0	1/1:9,0:9:26.98:248,27,0	0/0:23,0:23:66.14:0,66,1631	0/1:1,9:18:13.96:139,0,14	1/1:1,0:13:33.39:221,33,0	1/1:2,0:11:19.39:141,19,0	1/1:0,0:5:5.17:20,5,0	0/0:6,0:6:18.02:0,18,217	0/0:7,0:7:21.04:0,21,455	0/0:4,0:4:12.02:0,12,284	0/0:12,0:12:36.08:0,36,756	0/0:24,0:24:69.16:0,69,1503	0/0:15,0:15:45.08:0,45,1048	0/0:21,0:21:57.13:0,57,1310
chr10	15366023	.	AGTTT	A	7955.09	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=12.514;DP=404;FS=4.194;HRun=0;HaplotypeScore=69.1520;InbreedingCoeff=0.9703;MQ=68.37;MQ0=0;MQRankSum=-2.635;QD=44.94;ReadPosRankSum=2.135;VQSLOD=5.0421;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:63.20:0,63,1587	1/1:0,5:5:6.02:125,6,0	0/0:9,0:8:23.92:0,24,328	0/0:10,0:8:20.97:0,21,366	0/0:15,0:15:45.14:0,45,1145	0/0:24,0:24:72.23:0,72,1889	0/0:10,0:10:30.10:0,30,700	1/1:0,24:24:72.17:1180,72,0	1/1:0,10:10:18.06:376,18,0	1/1:0,16:16:48.15:927,48,0	1/1:0,16:16:41.80:604,42,0	0/0:8,0:8:24.05:0,24,439	0/0:11,0:11:33.11:0,33,850	0/0:15,0:15:45.14:0,45,1067	0/0:5,0:5:15.05:0,15,430	0/0:8,0:8:24.06:0,24,530	1/1:0,52:52:99:2241,108,0	0/0:19,0:19:57.17:0,57,1493	0/0:16,0:16:48.16:0,48,1166	0/0:11,0:11:33.11:0,33,881	0/0:10,0:10:27.09:0,27,673	0/0:4,0:4:12.04:0,12,277	0/0:5,0:5:15.04:0,15,362	0/0:11,0:11:33.11:0,33,848	0/0:15,0:15:45.12:0,45,1146	1/1:0,23:23:69.17:1222,69,0	1/1:0,17:17:27.09:557,27,0	1/1:0,14:14:36.12:725,36,0
chr10	15366536	.	AAT	A	2759.24	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=11.238;DP=407;FS=13.335;HRun=0;HaplotypeScore=49.3609;InbreedingCoeff=0.9770;MQ=62.39;MQ0=3;MQRankSum=1.079;QD=31.00;ReadPosRankSum=0.709;VQSLOD=4.4495;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,102,1740	0/0:12,0:12:36.11:0,36,588	0/0:13,0:11:33.09:0,33,491	0/0:6,0:6:17.68:0,18,181	0/0:15,0:15:45.15:0,45,774	0/0:24,0:24:71.98:0,72,1187	0/0:13,0:13:36.09:0,36,541	0/0:35,0:35:99:0,105,1678	0/0:10,0:10:30.08:0,30,463	0/0:14,0:14:39.05:0,39,573	0/0:11,0:11:27.08:0,27,476	0/0:8,0:8:24.07:0,24,376	0/0:8,0:8:24.08:0,24,401	0/0:5,0:5:15.04:0,15,218	1/1:0,13:12:27.09:395,27,0	1/1:0,11:11:24.08:353,24,0	0/0:33,0:33:96.30:0,96,1541	1/1:1,22:21:51.06:724,51,0	1/1:0,19:18:54.16:769,54,0	1/1:0,11:11:29.38:354,29,0	1/1:0,12:12:24.08:352,24,0	0/0:3,0:3:9.03:0,9,159	0/0:5,0:5:15.03:0,15,200	0/0:7,0:7:21.07:0,21,316	0/0:11,0:11:33.10:0,33,554	0/0:19,0:19:57.19:0,57,965	0/0:17,0:17:51.15:0,51,796	0/0:15,0:15:45.15:0,45,775
chr10	15366722	.	TA	T	1807.92	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=8.723;DP=396;FS=1.037;HRun=8;HaplotypeScore=52.8015;InbreedingCoeff=0.9528;MQ=82.17;MQ0=0;MQRankSum=-2.724;QD=21.27;ReadPosRankSum=0.126;VQSLOD=3.4097;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:96.27:0,96,1142	0/0:6,0:6:18.05:0,18,208	0/0:21,0:14:25.92:0,26,236	0/0:26,0:21:37.34:0,37,330	0/0:8,0:8:21.06:0,21,253	0/0:16,0:16:42.12:0,42,496	0/0:13,0:13:36.11:0,36,433	0/0:26,0:26:78.14:0,78,885	0/0:10,0:10:21.06:0,21,253	0/0:13,0:13:39.09:0,39,448	0/0:3,0:3:9.03:0,9,108	0/0:12,0:12:36.10:0,36,424	0/0:13,0:13:30.09:0,30,361	0/0:9,0:9:24.06:0,24,278	1/1:6,3:9:27.03:254,27,0	1/1:8,7:15:45.01:423,45,0	0/0:29,0:29:72.20:0,72,851	1/1:16,2:17:30.05:289,30,0	1/1:9,13:22:56.91:525,57,0	1/1:8,4:12:29.84:273,30,0	1/1:7,2:9:24.04:231,24,0	0/0:3,0:3:6.02:0,6,72	0/0:9,0:9:21.06:0,21,253	0/0:4,0:4:12.04:0,12,144	0/0:12,0:12:30.08:0,30,350	0/0:17,0:17:48.10:0,48,543	0/0:22,0:22:51.11:0,51,597	0/0:5,0:5:15.05:0,15,180
chr10	15366734	.	T	TA	1884.48	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=8.614;DP=408;FS=1.716;HRun=9;HaplotypeScore=60.0852;InbreedingCoeff=0.8776;MQ=80.86;MQ0=0;MQRankSum=-1.231;QD=17.13;ReadPosRankSum=-1.269;VQSLOD=3.4854;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:80.92:0,81,693	0/0:6,0:6:15:0,15,130	0/1:17,0:11:1.83:2,0,111	0/0:23,0:19:21.29:0,21,181	0/0:11,0:11:26.78:0,27,221	0/0:15,0:15:32.99:0,33,286	0/0:14,0:14:29.95:0,30,254	0/0:28,0:28:53.95:0,54,463	0/0:10,0:11:23.03:0,23,188	0/0:14,0:15:32:0,32,266	0/0:4,0:4:5.98:0,6,52	0/0:11,0:11:26.98:0,27,234	0/0:14,0:14:20.83:0,21,182	0/0:8,0:8:24:0,24,208	1/1:10,1:11:21.02:219,21,0	1/1:10,7:17:39.11:431,39,0	0/0:31,0:31:65.96:0,66,573	1/1:11,4:14:12.83:344,13,0	1/1:13,13:26:51.11:546,51,0	1/1:9,4:13:27.07:295,27,0	1/1:9,1:10:21.06:232,21,0	0/0:5,0:5:8.99:0,9,78	0/0:11,0:11:20.66:0,21,182	0/0:4,0:4:12:0,12,104	0/0:13,0:13:26.99:0,27,234	0/0:16,0:16:38.99:0,39,338	0/0:20,0:20:44.98:0,45,390	0/0:3,0:3:9:0,9,78
chr10	15366802	.	C	CGT	4422.08	PASS	AB=1.000;AC=24;AF=0.429;AN=56;BaseQRankSum=-0.528;DP=542;FS=1.390;HRun=0;HaplotypeScore=112.6389;InbreedingCoeff=0.6112;MQ=70.10;MQ0=8;MQRankSum=-3.144;QD=20.76;ReadPosRankSum=2.203;VQSLOD=5.0686;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:25.41:0,25,171	1/1:12,0:11:29.99:347,30,0	0/0:85,0:30:58.95:0,59,740	0/0:101,0:33:80.57:0,81,861	0/1:7,0:7:16.68:17,0,30	0/1:10,0:10:17.10:24,0,17	0/1:13,0:13:3.21:3,0,42	1/1:26,1:27:65.90:681,66,0	1/1:13,1:14:27.08:350,27,0	1/1:22,0:22:63.05:695,63,0	1/1:8,1:9:14.88:196,15,0	0/0:11,0:11:19.01:0,19,114	0/0:12,0:12:14.34:0,14,99	0/1:9,0:9:5.86:6,0,61	0/0:10,0:10:27.74:0,28,205	0/0:15,0:15:41.09:0,41,297	1/1:27,3:30:69.69:921,70,0	0/0:15,0:14:31:0,31,234	0/0:17,0:17:35.14:0,35,225	0/0:12,0:12:8.19:0,8,206	0/1:13,0:13:5.67:6,0,149	0/0:7,0:7:14.13:0,14,110	0/0:6,0:6:8.15:0,8,38	0/1:9,0:9:1.93:2,0,95	0/0:12,0:12:13.80:0,14,98	1/1:15,0:15:45.07:521,45,0	1/1:16,1:17:38.93:469,39,0	1/1:5,0:5:15.05:185,15,0
chr10	15366803	.	G	GT	2988.87	PASS	AB=0.671;AC=42;AF=0.750;AN=56;BaseQRankSum=-2.085;DP=563;FS=0.536;HRun=10;HaplotypeScore=115.0167;InbreedingCoeff=0.4815;MQ=69.38;MQ0=8;MQRankSum=-0.775;QD=9.08;ReadPosRankSum=0.704;VQSLOD=2.4356;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,22:30:10.93:123,11,0	1/1:9,0:11:26.17:157,26,0	0/0:88,0:30:1.53:0,2,221	0/0:105,0:35:20.44:0,20,227	1/1:7,0:7:17.81:121,18,0	1/1:9,0:10:8.81:59,9,0	1/1:11,1:12:20.93:168,21,0	1/1:23,0:29:40.37:241,40,0	1/1:12,0:15:25.19:138,25,0	1/1:21,0:23:39.78:220,40,0	1/1:8,0:9:14.43:84,14,0	1/1:6,7:13:12.02:122,12,0	1/1:3,8:12:6.01:59,6,0	1/1:6,3:9:26.97:245,27,0	0/0:1,0:11:15.55:0,16,48	0/0:4,0:15:27:0,27,78	1/1:26,0:31:66.75:377,67,0	0/0:9,0:14:4.72:0,5,29	0/1:17,0:17:12.12:58,0,12	1/1:11,1:12:4.63:72,5,0	1/1:11,2:13:11.66:97,12,0	0/1:2,5:7:14.36:57,0,14	1/1:0,6:6:8.98:84,9,0	0/1:2,6:10:10.84:94,0,11	0/1:2,10:12:12.54:84,0,13	1/1:14,0:15:31.53:172,32,0	1/1:13,0:18:32.72:212,33,0	1/1:6,0:6:15.81:118,16,0
chr10	15366804	.	T	TG	3688.31	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=-0.064;DP=577;FS=3.762;HRun=1;HaplotypeScore=116.3604;InbreedingCoeff=0.4321;MQ=68.82;MQ0=10;MQRankSum=-3.276;QD=12.05;ReadPosRankSum=5.513;VQSLOD=2.5434;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:30:1.35:1,0,97	1/1:3,9:11:29.83:288,30,0	0/0:90,1:31:36.66:0,37,707	0/0:107,0:35:83.53:0,84,715	0/1:7,0:7:0.54:1,0,25	0/0:11,0:11:6.76:0,7,46	0/0:12,0:12:12.83:0,13,70	1/1:23,4:27:54.37:587,54,0	1/1:7,9:16:24:264,24,0	1/1:5,19:24:65.12:543,65,0	1/1:2,7:9:14.82:153,15,0	0/1:13,0:13:1.20:1,0,72	0/1:12,0:12:0.12:0,0,64	0/1:9,0:9:1.01:29,0,1	0/1:13,0:13:17.80:18,0,21	0/1:16,0:16:26.38:26,0,42	1/1:13,18:31:54.63:728,55,0	0/1:18,0:17:16.33:16,0,91	0/0:16,0:16:34.79:0,35,248	0/0:13,0:13:29.24:0,29,219	0/0:13,0:13:28.60:0,29,244	0/0:8,0:8:9.20:0,9,114	0/1:6,0:6:3.40:3,0,13	0/1:10,0:10:1.45:1,0,69	0/1:12,0:12:2.04:2,0,57	1/1:8,8:16:42.99:418,43,0	1/1:9,9:18:36.19:406,36,0	1/1:2,4:6:18.03:203,18,0
chr10	15366813	.	T	TTG	1884.95	PASS	AB=1.000;AC=42;AF=0.750;AN=56;BaseQRankSum=0.898;DP=575;FS=20.615;HRun=0;HaplotypeScore=121.1762;InbreedingCoeff=0.1476;MQ=68.63;MQ0=15;MQRankSum=-0.860;QD=5.43;ReadPosRankSum=4.438;VQSLOD=1.2442;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:28:1.27:1,0,82	1/1:12,0:11:13.74:74,14,0	0/0:104,0:28:53.32:0,53,400	0/0:124,0:41:47.87:0,48,432	1/1:0,5:6:17.83:152,18,0	1/1:4,7:13:11.87:141,12,0	1/1:1,8:11:20.28:332,20,0	0/1:11,0:19:1.29:78,0,1	1/1:14,0:14:10.04:51,10,0	1/1:17,0:18:19.60:114,20,0	1/1:7,0:7:11.27:43,11,0	0/1:10,0:10:21.67:31,0,22	1/1:10,0:10:3.47:10,3,0	1/1:9,0:9:23.16:145,23,0	1/1:13,0:13:5.10:80,5,0	1/1:18,0:18:10.23:119,10,0	1/1:28,0:30:28.07:115,28,0	1/1:15,0:14:25.34:174,25,0	0/1:15,0:15:37.03:37,0,79	0/1:11,0:11:29.01:55,0,29	0/1:13,0:13:23.12:45,0,23	0/1:8,0:8:0.33:0,0,86	0/1:6,0:6:10.76:30,0,11	0/1:11,0:11:22.08:22,0,53	0/1:13,0:13:6.70:7,0,63	1/1:14,0:14:18.23:107,18,0	1/1:15,0:15:9.60:65,10,0	1/1:7,0:7:2.62:19,3,0
chr10	15366821	.	GGGT	G	717.33	PASS	AB=0.975;AC=11;AF=0.196;AN=56;BaseQRankSum=7.644;DP=538;FS=6.107;HRun=0;HaplotypeScore=114.6141;InbreedingCoeff=0.2842;MQ=63.42;MQ0=17;MQRankSum=1.417;QD=5.74;ReadPosRankSum=6.404;VQSLOD=0.9478;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:42.09:0,42,761	0/1:10,0:9:6.36:59,0,6	0/0:98,0:23:54.51:0,55,702	0/0:113,0:35:74.41:0,74,779	0/0:5,0:5:12.01:0,12,143	0/0:11,0:11:26.64:0,27,362	0/0:11,0:11:30.03:0,30,459	0/1:17,0:17:49.12:106,0,49	0/1:10,2:12:3.64:98,0,4	0/1:16,0:16:61.22:88,0,61	1/1:7,0:7:10.82:61,11,0	0/0:10,0:10:21.04:0,21,332	0/0:7,0:7:9.03:0,9,199	0/0:5,0:5:14.79:0,15,282	0/0:14,0:14:41.92:0,42,681	0/0:20,0:20:59.94:0,60,996	0/1:28,1:29:75.79:208,0,76	0/0:17,0:17:51.08:0,51,816	0/0:18,0:18:48.11:0,48,679	0/0:9,0:9:26.11:0,26,435	0/0:13,0:13:38.04:0,38,571	0/0:7,0:7:18.06:0,18,384	0/0:4,0:4:12.03:0,12,209	0/0:15,0:15:36:0,36,639	0/0:13,0:13:30.05:0,30,510	0/1:13,0:13:6.58:75,0,7	1/1:8,4:11:25.04:147,25,0	0/1:9,0:9:33.19:34,0,33
chr10	15367951	.	TG	T	7401.38	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=13.892;DP=856;FS=11.647;HRun=1;HaplotypeScore=122.8983;InbreedingCoeff=0.9996;MQ=64.03;MQ0=2;MQRankSum=-0.785;QD=37.76;ReadPosRankSum=0.591;VQSLOD=3.1645;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:44:76.36:0,76,1204	0/0:8,0:8:24.07:0,24,360	0/0:30,1:24:65.29:0,65,893	0/0:36,0:31:81.22:0,81,986	0/0:33,0:33:93.26:0,93,1467	0/0:28,0:28:69.24:0,69,1103	0/0:19,0:19:48.16:0,48,746	0/0:41,0:41:99:0,117,1840	0/0:24,0:24:51.17:0,51,815	0/0:44,0:44:99:0,129,2039	0/0:20,0:20:60.20:0,60,959	0/0:23,0:23:60.17:0,60,912	0/0:35,0:35:99:0,99,1549	0/0:34,0:33:78.26:0,78,1217	1/1:0,35:35:96.12:1235,96,0	1/1:0,31:31:87.26:1196,87,0	0/0:26,0:25:59.94:0,60,948	1/1:1,31:32:80.37:1203,80,0	1/1:0,26:26:78.26:1087,78,0	1/1:0,24:24:66.06:833,66,0	1/1:1,47:48:99:1849,133,0	0/0:37,0:37:99:0,111,1741	0/0:33,0:33:99:0,99,1571	0/0:17,0:16:41.97:0,42,671	0/0:27,0:27:79.13:0,79,1205	0/0:36,0:35:99:0,105,1626	0/0:35,0:35:99:0,99,1569	0/0:28,0:28:84.29:0,84,1342
chr10	15368210	.	AGT	A	1163.96	PASS	AB=0.925;AC=9;AF=0.161;AN=56;BaseQRankSum=6.185;DP=830;FS=9.543;HRun=0;HaplotypeScore=150.2650;InbreedingCoeff=0.5082;MQ=57.12;MQ0=13;MQRankSum=3.795;QD=6.58;ReadPosRankSum=1.448;VQSLOD=2.7693;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:54,2:53:42.96:0,43,1142	0/0:8,0:8:17.99:0,18,254	0/0:43,0:23:27.57:0,28,292	0/1:33,2:21:17.13:17,0,208	1/1:6,13:18:18.05:211,18,0	1/1:11,25:34:56.53:641,57,0	1/1:6,17:24:35.94:401,36,0	0/0:51,0:51:42.07:0,42,570	0/1:28,4:34:27.79:28,0,918	0/0:35,1:36:37.05:0,37,1016	0/0:11,0:11:14.85:0,15,235	0/1:27,2:29:22.21:22,0,564	0/0:36,0:37:75.24:0,75,1152	0/0:25,1:26:10.46:0,10,626	0/0:15,0:33:8.52:0,9,60	0/0:11,0:33:11.46:0,11,117	0/0:17,0:17:39.11:0,39,563	0/0:6,0:14:6:0,6,51	0/0:10,0:15:25.81:0,26,240	0/0:10,0:21:5.54:0,6,25	0/0:62,0:60:35.27:0,35,318	0/0:29,0:29:60.17:0,60,891	0/0:21,0:21:3.96:0,4,501	0/0:26,1:27:15.97:0,16,687	0/0:31,1:31:63.21:0,63,990	0/0:44,0:44:99:0,111,1694	0/0:24,1:25:54.17:0,54,827	0/0:10,0:10:27.09:0,27,424
chr10	15368473	.	AAGGAGGAGGAGG	A	2890.64	PASS	AB=1.000;AC=17;AF=0.315;AN=54;BaseQRankSum=2.014;DP=325;FS=24.694;HRun=0;HaplotypeScore=105.4116;InbreedingCoeff=0.6115;MQ=56.34;MQ0=12;MQRankSum=-0.866;QD=35.69;ReadPosRankSum=1.536;VQSLOD=1.1198;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:17:30.62:0,31,1070	0/0:4,0:3:6.02:0,6,182	0/0:13,0:8:17.27:0,17,374	0/0:15,0:11:3.57:0,4,825	0/0:9,0:7:2.58:0,3,97	0/0:15,0:15:28.17:0,28,652	0/0:4,0:4:9.03:0,9,165	0/0:11,0:9:27.05:0,27,532	./.	0/1:9,0:7:22.57:23,0,257	0/0:4,0:4:5.98:0,6,73	0/0:19,0:19:24.08:0,24,888	0/0:14,0:13:27.66:0,28,941	0/0:9,0:9:27.09:0,27,1017	1/1:10,0:10:27.08:662,27,0	1/1:9,0:9:27.09:591,27,0	0/1:11,0:9:2.69:3,0,409	1/1:13,0:13:30.10:642,30,0	1/1:3,7:9:21.04:507,21,0	1/1:0,11:11:21.02:389,21,0	1/1:2,0:2:3.01:74,3,0	0/0:25,0:24:27.63:0,28,1316	0/0:21,0:21:48.12:0,48,1602	0/0:16,0:15:20.74:0,21,825	0/0:33,0:33:60.19:0,60,1859	0/0:9,0:8:24.08:0,24,685	1/1:3,0:3:3.01:107,3,0	0/1:3,0:2:60:75,0,60
chr10	15368485	.	G	GAGA	1597.28	PASS	AB=1.000;AC=42;AF=0.913;AN=46;BaseQRankSum=-2.313;DP=357;FS=5.257;HRun=0;HaplotypeScore=81.7428;InbreedingCoeff=0.1951;MQ=48.78;MQ0=25;MQRankSum=0.794;QD=5.14;ReadPosRankSum=0.323;VQSLOD=1.3012;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:20:15.05:107,15,0	./.	./.	./.	1/1:13,0:10:1.52:4,2,0	0/1:17,0:17:0.40:0,0,0	1/1:4,0:3:1.88:14,2,0	1/1:17,0:11:5.62:25,6,0	./.	1/1:12,0:9:6.62:40,7,0	./.	1/1:20,0:20:8.98:84,9,0	1/1:15,0:14:16.95:213,17,0	1/1:15,0:15:15.28:441,15,0	0/0:8,0:8:0.33:0,0,1	1/1:8,0:8:2.98:21,3,0	1/1:13,0:9:1.19:4,1,0	0/1:13,0:13:12:15,0,12	1/1:11,0:10:4.81:26,5,0	1/1:13,0:13:4.52:24,5,0	1/1:2,0:2:0.89:2,1,0	1/1:26,0:24:16.17:122,16,0	1/1:19,0:19:18.44:150,18,0	1/1:15,0:14:15.89:135,16,0	1/1:11,15:29:16.38:183,16,0	1/1:10,0:8:3.44:21,3,0	1/1:8,0:7:2.46:38,2,0	1/1:8,0:6:2.88:15,3,0
chr10	15368513	.	AGAG	A	3565.52	PASS	AB=0.882;AC=43;AF=0.827;AN=52;BaseQRankSum=7.449;DP=455;FS=21.781;HRun=0;HaplotypeScore=113.1937;InbreedingCoeff=-0.0572;MQ=43.20;MQ0=24;MQRankSum=-6.667;QD=8.20;ReadPosRankSum=-2.628;VQSLOD=1.1931;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:31,0:28:76.07:76,0,318	1/1:6,0:5:5.89:37,6,0	./.	./.	1/1:22,0:20:17.56:78,18,0	1/1:13,0:13:7.62:55,8,0	1/1:13,0:12:14.78:97,15,0	1/1:38,0:29:53.68:403,54,0	1/1:7,0:5:5.93:40,6,0	1/1:24,0:21:34.87:268,35,0	1/1:11,0:6:11.80:75,12,0	0/1:6,12:18:22.29:22,0,171	0/1:19,0:18:64.29:64,0,203	0/0:20,0:20:2.34:0,2,611	1/1:7,0:7:15.39:121,15,0	1/1:12,0:12:27.35:220,27,0	1/1:12,0:8:9.41:66,9,0	1/1:15,0:14:29.53:197,30,0	1/1:18,0:18:47.37:358,47,0	1/1:23,0:22:46.52:330,47,0	1/1:5,0:5:10.69:68,11,0	0/1:15,16:30:67.65:68,0,420	0/1:18,1:19:99:183,0,117	0/1:17,0:17:17.49:17,0,348	0/1:27,1:28:99:132,0,134	1/1:13,0:9:19.08:128,19,0	1/1:13,0:12:19.22:132,19,0	1/1:20,0:18:50.81:330,51,0
chr10	15368555	.	GGAAGAAGAGGAA	G	7033.93	PASS	AB=0.935;AC=29;AF=0.518;AN=56;BaseQRankSum=9.112;DP=500;FS=38.281;HRun=0;HaplotypeScore=175.5926;InbreedingCoeff=0.4660;MQ=49.79;MQ0=14;MQRankSum=-4.417;QD=24.42;ReadPosRankSum=4.894;VQSLOD=2.7496;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:33:79.15:0,79,3222	1/1:9,0:7:12.04:229,12,0	0/0:12,0:5:15.05:0,15,264	0/0:17,0:9:24.05:0,24,451	1/1:5,16:20:30.06:715,30,0	1/1:5,11:16:3.01:101,3,0	0/1:3,14:17:9.09:95,0,9	1/1:12,0:6:15.03:351,15,0	1/1:16,0:14:36.12:813,36,0	0/1:26,0:24:99:826,0,121	1/1:8,0:6:12.04:234,12,0	0/0:16,0:16:42.14:0,42,1645	0/0:21,0:20:48.10:0,48,1722	0/0:20,0:20:57.17:0,57,2418	0/1:16,0:16:15.07:63,0,15	0/1:13,0:13:62.34:148,0,62	1/1:15,0:11:24.01:483,24,0	1/1:13,0:13:9.43:123,9,0	0/1:17,0:16:34.49:177,0,34	1/1:19,0:19:14.34:249,14,0	1/1:12,0:12:14.87:106,15,0	0/0:24,0:25:55.43:0,55,2111	0/0:14,0:14:33.11:0,33,1334	0/0:26,0:26:72.54:0,73,2353	0/0:25,0:25:45.15:0,45,1788	0/1:20,0:17:22.57:610,0,23	0/1:14,0:13:11.05:458,0,11	1/1:24,0:24:49.16:1253,49,0
chr10	15368564	.	GGAA	G	4313.91	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=10.308;DP=527;FS=49.648;HRun=0;HaplotypeScore=125.4616;InbreedingCoeff=0.8972;MQ=52.82;MQ0=11;MQRankSum=-5.568;QD=22.12;ReadPosRankSum=3.229;VQSLOD=2.8478;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:84.29:0,84,1723	1/1:5,4:8:15.05:201,15,0	0/0:17,0:10:23.26:0,23,522	0/0:20,0:11:30.04:0,30,481	1/1:19,1:19:25.72:269,26,0	1/1:15,0:15:3.01:43,3,0	1/1:15,0:15:3.01:43,3,0	1/1:12,2:10:27.05:307,27,0	1/1:4,12:14:39.12:534,39,0	1/1:14,10:23:43.29:601,43,0	1/1:1,7:6:12.04:176,12,0	0/0:16,0:16:45.15:0,45,896	0/0:19,0:19:45.14:0,45,880	0/0:21,0:21:54.19:0,54,1078	0/0:19,0:19:15.64:0,16,122	0/0:18,0:18:13.01:0,13,102	1/1:7,7:11:23.99:320,24,0	0/0:16,0:16:1.47:0,1,78	0/0:22,0:21:15.37:0,15,127	0/0:23,0:23:12.57:0,13,105	0/0:16,0:16:11.54:0,12,85	0/0:26,0:26:52.73:0,53,1021	0/0:15,0:15:33.10:0,33,643	0/0:27,0:27:69.24:0,69,1418	0/0:25,0:25:54.19:0,54,1110	1/1:6,15:18:37.97:494,38,0	1/1:6,9:14:30.09:423,30,0	1/1:3,21:24:65.29:902,65,0
chr10	15368567	.	A	AGAG	4655.99	PASS	AB=0.909;AC=21;AF=0.375;AN=56;BaseQRankSum=3.607;DP=530;FS=59.756;HRun=0;HaplotypeScore=125.5746;InbreedingCoeff=0.7575;MQ=54.48;MQ0=10;MQRankSum=-5.862;QD=23.76;ReadPosRankSum=2.902;VQSLOD=2.5889;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:93.26:0,93,1470	1/1:7,3:9:15.02:215,15,0	0/0:17,0:10:23.26:0,23,438	0/0:21,0:12:33.05:0,33,477	1/1:18,2:19:29.89:567,30,0	1/1:15,0:15:3.01:61,3,0	0/1:15,0:15:13.99:55,0,14	1/1:7,8:12:17.29:527,17,0	1/1:13,3:14:39.09:561,39,0	0/1:17,6:24:14.57:618,0,15	1/1:8,0:6:12:117,12,0	0/0:17,0:17:48.11:0,48,783	0/0:18,0:18:51.09:0,51,782	0/0:20,0:20:60.17:0,60,944	0/0:21,0:21:47.89:0,48,371	0/0:18,0:18:46.25:0,46,380	1/1:14,0:11:17.81:313,18,0	0/0:16,0:16:32.27:0,32,220	0/0:22,0:21:52.17:0,52,429	0/0:23,0:23:50.65:0,51,406	0/0:17,0:17:32.26:0,32,242	0/0:26,0:26:65.54:0,66,942	0/0:14,0:14:36.10:0,36,564	0/0:27,0:27:75.23:0,75,1222	0/0:25,0:25:60.19:0,60,972	0/1:19,1:17:5.38:488,0,5	1/1:13,2:14:24.59:299,25,0	1/1:22,1:23:66.96:834,67,0
chr10	15369151	.	A	ATT	700.17	PASS	AB=1.000;AC=14;AF=0.259;AN=54;BaseQRankSum=4.933;DP=197;FS=0.000;HRun=3;HaplotypeScore=38.7215;InbreedingCoeff=0.3671;MQ=52.78;MQ0=9;MQRankSum=-3.624;QD=10.00;ReadPosRankSum=3.804;VQSLOD=0.5462;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:24.08:0,24,335	0/1:2,0:2:9.78:10,0,10	0/0:5,0:3:1.12:0,1,39	0/0:3,0:3:9.03:0,9,126	./.	0/0:6,0:5:15.03:0,15,160	0/0:6,0:5:15:0,15,169	0/0:39,0:31:49.53:0,50,895	0/0:3,0:3:8.99:0,9,103	0/0:6,0:6:12.02:0,12,142	0/0:2,0:1:3.01:0,3,42	0/0:2,0:2:6.02:0,6,84	0/0:1,0:1:3.01:0,3,42	0/0:6,0:6:12.03:0,12,151	1/1:5,0:5:8.99:92,9,0	1/1:7,0:6:9:111,9,0	0/0:11,0:11:7.98:0,8,170	1/1:3,5:7:9:121,9,0	0/1:14,0:12:69.16:160,0,69	1/1:2,4:6:12.04:191,12,0	1/1:1,3:4:6.02:100,6,0	0/0:2,0:2:6.02:0,6,84	0/0:5,0:5:15.05:0,15,207	0/0:3,0:3:6.02:0,6,84	0/0:10,0:10:17.06:0,17,233	0/0:4,0:4:0.51:0,1,111	0/1:9,0:9:15.90:16,0,161	0/1:15,0:15:59.28:59,0,93
chr10	15369153	.	TTA	T	859.75	PASS	AB=0.835;AC=16;AF=0.286;AN=56;BaseQRankSum=5.058;DP=184;FS=2.573;HRun=0;HaplotypeScore=36.6047;InbreedingCoeff=0.3474;MQ=48.43;MQ0=9;MQRankSum=-3.678;QD=13.23;ReadPosRankSum=2.107;VQSLOD=3.1196;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:27.08:0,27,438	0/1:2,0:2:10.19:10,0,36	0/0:4,0:2:1.12:0,1,54	0/0:3,0:3:9.03:0,9,156	1/1:2,0:1:0.47:1,0,0	0/0:6,0:5:0.16:0,0,29	0/0:6,0:5:3.16:0,3,105	0/0:40,0:32:41.04:0,41,1157	0/0:3,0:3:9.03:0,9,136	0/0:5,0:5:12.04:0,12,180	0/0:1,1:1:3.01:0,3,42	0/0:2,0:2:6.02:0,6,99	0/0:1,0:1:3.01:0,3,46	0/0:5,0:5:12.03:0,12,169	1/1:0,5:5:9.03:137,9,0	1/1:0,5:4:9.03:136,9,0	0/0:10,0:10:21.07:0,21,351	1/1:5,2:6:8.90:106,9,0	0/1:5,8:11:99:263,0,126	1/1:3,2:5:11.91:151,12,0	1/1:2,1:3:5.97:65,6,0	0/0:2,0:2:6.02:0,6,84	0/0:5,0:5:15.05:0,15,222	0/0:2,0:2:6.02:0,6,99	0/0:9,0:9:16.24:0,16,250	0/0:4,0:4:12.04:0,12,166	0/1:7,1:8:21.26:21,0,281	0/1:12,3:15:99:129,0,340
chr10	15369159	.	ATTTATTTATT	A	1174.41	PASS	AB=1.000;AC=17;AF=0.327;AN=52;BaseQRankSum=-0.048;DP=172;FS=8.005;HRun=0;HaplotypeScore=58.8853;InbreedingCoeff=0.0780;MQ=42.90;MQ0=9;MQRankSum=0.447;QD=11.08;ReadPosRankSum=-1.740;VQSLOD=0.3179;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:10.67:0,11,133	0/1:2,0:2:11.23:35,0,11	0/0:4,0:2:5.98:0,6,65	0/0:4,0:4:8.39:0,8,98	1/1:2,0:1:3.01:41,3,0	0/0:6,0:5:7.30:0,7,78	0/1:6,0:5:31.27:31,0,103	0/1:40,0:32:99:245,0,842	1/1:2,0:2:3:29,3,0	0/0:2,0:2:0.65:0,1,83	./.	0/0:2,0:2:3.01:0,3,55	0/0:1,0:1:3.01:0,3,56	0/0:4,0:4:5.06:0,5,100	0/0:4,0:4:5.80:0,6,32	0/0:4,0:3:2.90:0,3,16	0/1:11,0:11:60.12:60,0,149	0/1:6,0:5:7.42:33,0,7	1/1:9,4:11:21.94:461,22,0	1/1:3,0:3:8.62:93,9,0	1/1:2,0:2:5.51:51,6,0	./.	0/0:3,0:3:3.01:0,3,98	0/0:2,0:2:3.01:0,3,45	0/0:10,0:10:8.86:0,9,115	0/1:4,0:4:74.57:75,0,75	0/0:7,0:7:4.80:0,5,165	0/1:12,0:15:99:169,0,454
chr10	15369167	.	ATT	A	1769.48	PASS	AB=0.827;AC=33;AF=0.635;AN=52;BaseQRankSum=5.184;DP=151;FS=16.335;HRun=5;HaplotypeScore=32.7157;InbreedingCoeff=0.3597;MQ=40.19;MQ0=7;MQRankSum=-0.157;QD=14.62;ReadPosRankSum=1.576;VQSLOD=-0.4917;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:7:7.33:0,7,113	1/1:1,1:2:6.02:82,6,0	0/0:3,0:2:5.98:0,6,65	0/0:3,0:3:8.39:0,8,98	1/1:0,2:1:3.01:41,3,0	1/1:6,1:6:5.30:93,5,0	0/1:5,0:4:6.23:31,0,6	0/1:34,6:32:99:323,0,746	1/1:1,1:2:6.01:71,6,0	1/1:2,0:2:2.97:9,3,0	./.	0/0:1,0:1:3.01:0,3,45	1/1:3,0:3:0.89:2,1,0	0/0:4,0:4:0.54:0,1,42	1/1:1,2:3:6.02:84,6,0	1/1:0,2:1:3.01:42,3,0	0/1:4,7:11:58.92:67,0,59	1/1:1,2:3:8.62:93,9,0	1/1:9,2:10:20.34:232,20,0	1/1:1,2:3:8.62:93,9,0	1/1:1,1:2:5.51:51,6,0	./.	0/0:2,0:2:3.01:0,3,45	0/0:1,0:1:3.01:0,3,45	0/0:8,0:8:3.32:0,3,48	1/1:1,2:3:8.86:98,9,0	1/1:2,2:4:11.60:102,12,0	1/1:10,6:16:41:409,41,0
chr10	15369169	.	T	TTA	2178.58	PASS	AB=0.838;AC=32;AF=0.615;AN=52;BaseQRankSum=5.251;DP=153;FS=11.754;HRun=0;HaplotypeScore=34.7075;InbreedingCoeff=0.4351;MQ=40.80;MQ0=6;MQRankSum=-1.516;QD=18.15;ReadPosRankSum=0.904;VQSLOD=1.8632;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:7:7.30:0,7,113	1/1:2,0:2:6.02:91,6,0	0/0:3,0:2:5.98:0,6,65	0/0:3,0:3:8.39:0,8,98	1/1:2,0:1:3.01:41,3,0	1/1:6,1:6:5.41:128,5,0	1/1:4,1:4:1.76:35,2,0	0/1:31,8:32:99:323,0,730	1/1:3,0:3:6.01:71,6,0	1/1:1,1:2:5.05:63,5,0	./.	0/0:1,0:1:3.01:0,3,45	0/0:0,0:3:3:0,3,25	0/0:1,0:4:5.04:0,5,69	1/1:4,0:4:5.82:36,6,0	1/1:2,0:1:2.84:14,3,0	0/1:9,2:11:56.99:114,0,57	1/1:3,0:3:8.86:88,9,0	1/1:11,0:10:19.97:174,20,0	1/1:3,0:3:8.62:93,9,0	1/1:2,0:2:6.02:83,6,0	./.	0/0:2,0:2:3.01:0,3,45	0/0:1,0:1:3.01:0,3,45	0/0:2,0:8:5.78:0,6,71	1/1:2,1:3:9.03:136,9,0	1/1:3,2:5:12.04:177,12,0	1/1:9,7:16:42.14:673,42,0
chr10	15369173	.	A	ATT	478.71	PASS	AB=0.876;AC=8;AF=0.160;AN=50;BaseQRankSum=1.823;DP=153;FS=0.000;HRun=5;HaplotypeScore=36.8908;InbreedingCoeff=-0.1239;MQ=41.16;MQ0=5;MQRankSum=-1.345;QD=9.97;ReadPosRankSum=1.752;VQSLOD=-0.7631;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:8,0:8:63.76:80,0,64	0/0:2,0:2:2.03:0,2,6	0/0:3,0:2:6.02:0,6,77	0/0:3,0:2:6:0,6,65	0/0:4,0:3:8.75:0,9,77	0/0:7,0:6:6.45:0,6,125	0/0:3,0:2:5.91:0,6,58	0/0:44,0:37:17.35:0,17,997	0/1:3,0:3:9.09:9,0,48	1/1:1,0:1:2.88:15,3,0	./.	0/0:1,0:1:3.01:0,3,42	0/0:3,0:3:2.90:0,3,16	0/0:4,0:4:0.85:0,1,51	0/0:3,0:3:9.02:0,9,102	0/0:3,0:2:6.01:0,6,57	0/1:9,2:11:24.69:88,0,25	0/0:2,0:2:6:0,6,58	0/0:9,0:9:24.01:0,24,166	0/0:2,0:2:5.64:0,6,26	0/0:2,0:2:2.80:0,3,13	./.	0/0:1,0:1:3.01:0,3,42	./.	0/0:7,0:7:5.91:0,6,58	0/1:2,1:3:18.56:42,0,19	0/1:5,1:6:38.41:104,0,38	0/1:12,4:16:35.90:259,0,36
chr10	15369179	.	TTA	T	138.04	PASS	AB=0.918;AC=9;AF=0.167;AN=54;BaseQRankSum=2.097;DP=163;FS=4.604;HRun=0;HaplotypeScore=37.3717;InbreedingCoeff=-0.1719;MQ=43.20;MQ0=2;MQRankSum=0.662;QD=1.38;ReadPosRankSum=0.736;VQSLOD=0.9749;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:8,0:8:3.85:4,0,109	0/0:2,0:2:6.02:0,6,91	0/0:1,0:1:3.01:0,3,57	0/0:2,0:1:3.01:0,3,48	0/0:4,0:3:9.03:0,9,153	0/0:5,0:4:12.04:0,12,181	0/0:3,0:2:6.02:0,6,107	0/1:40,4:40:33.09:33,0,1464	0/1:2,1:3:23.60:24,0,95	0/0:2,0:2:3.01:0,3,42	0/0:2,0:1:3.01:0,3,40	0/0:1,0:1:3.01:0,3,42	1/1:3,0:3:2.04:6,2,0	0/1:4,0:4:4.58:5,0,33	0/0:3,0:3:9.03:0,9,151	0/0:4,0:3:9.03:0,9,145	0/1:10,2:11:62.23:62,0,130	0/0:3,0:3:6.02:0,6,91	0/0:11,0:11:28.82:0,29,319	0/0:4,0:4:11.01:0,11,101	0/0:2,0:2:3.01:0,3,41	./.	0/0:1,0:1:3.01:0,3,42	0/0:1,0:1:2.99:0,3,24	0/0:9,0:9:4.71:0,5,103	0/0:3,0:3:4.56:0,5,45	0/1:8,1:9:12.83:13,0,228	0/1:17,0:17:99:109,0,349
chr10	15370140	.	ATT	A	2560.82	PASS	AC=12;AF=0.222;AN=54;BaseQRankSum=8.594;DP=596;FS=3.733;HRun=12;HaplotypeScore=75.1745;InbreedingCoeff=0.9240;MQ=73.76;MQ0=0;MQRankSum=2.369;QD=20.65;ReadPosRankSum=4.167;VQSLOD=3.3326;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:36:99:0,104,1363	0/0:5,0:6:15.04:0,15,207	0/0:14,0:16:4.18:0,4,268	0/0:14,0:14:16.70:0,17,179	0/0:20,0:22:45.08:0,45,590	0/0:25,0:26:68.71:0,69,971	0/0:27,0:29:65.14:0,65,822	0/0:20,0:22:48.13:0,48,645	0/0:20,0:20:57.12:0,57,734	0/0:31,0:32:78.24:0,78,1095	0/0:20,0:22:56.65:0,57,759	0/0:21,1:23:54.08:0,54,688	0/0:24,0:24:60.13:0,60,766	0/0:22,0:26:56.55:0,57,676	1/1:6,24:31:71.86:714,72,0	1/1:3,16:19:45.08:458,45,0	0/0:17,0:20:51.11:0,51,681	1/1:4,10:14:27.03:275,27,0	1/1:2,10:12:30.03:293,30,0	1/1:3,22:25:57.06:578,57,0	1/1:5,18:23:42.02:427,42,0	0/0:19,0:20:48.58:0,49,659	0/0:21,0:22:47.61:0,48,638	0/0:13,0:17:42.11:0,42,572	0/0:16,0:18:42.09:0,42,568	0/0:29,0:29:66.18:0,66,909	0/0:21,2:24:1.62:0,2,660	./.
chr10	15370688	.	CCTTTAATCCCAGCA	C	1641.03	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=6.611;DP=512;FS=20.264;HRun=0;HaplotypeScore=178.3939;InbreedingCoeff=0.8828;MQ=54.71;MQ0=2;MQRankSum=-5.576;QD=25.25;ReadPosRankSum=1.104;VQSLOD=1.7118;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,132,8927	0/0:7,0:7:21.07:0,21,1427	0/0:13,0:8:23.57:0,24,1139	0/0:13,0:7:21.07:0,21,840	0/0:21,0:21:63.22:0,63,4277	0/0:28,0:28:72.25:0,72,4865	0/0:26,0:26:71.92:0,72,4417	0/0:21,0:21:60.21:0,60,4169	0/0:18,0:18:51.18:0,51,3359	0/0:22,0:22:57.19:0,57,3711	0/0:13,0:13:39.13:0,39,2740	0/0:14,0:14:39.13:0,39,2310	0/0:14,0:14:36.12:0,36,2231	0/0:19,0:19:48.16:0,48,3146	1/1:0,8:6:9.03:380,9,0	1/1:3,8:6:9.03:380,9,0	0/0:39,0:38:96.30:0,96,6140	1/1:3,9:8:3.01:127,3,0	1/1:8,8:11:12.04:330,12,0	1/1:3,8:11:12.04:491,12,0	1/1:2,5:6:2.99:95,3,0	0/0:10,0:10:30.10:0,30,1737	0/0:15,0:15:45.15:0,45,3009	0/0:39,0:39:99:0,105,6975	0/0:9,0:9:24.08:0,24,1688	0/0:32,0:33:93.30:0,93,5854	0/0:18,0:17:48.16:0,48,2888	0/0:8,0:8:24.08:0,24,1664
chr10	15371368	.	TGATA	T	1907.74	PASS	AC=12;AF=0.231;AN=52;BaseQRankSum=7.287;DP=551;FS=3.035;HRun=0;HaplotypeScore=92.2066;InbreedingCoeff=0.9183;MQ=66.61;MQ0=4;MQRankSum=0.013;QD=18.89;ReadPosRankSum=1.040;VQSLOD=3.2580;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,1:32:7.83:0,8,1141	0/0:4,0:4:6.02:0,6,141	./.	./.	0/0:13,0:13:27.09:0,27,607	0/0:22,0:22:33.11:0,33,749	0/0:28,0:28:18.06:0,18,390	0/0:37,0:34:15.01:0,15,230	0/0:35,0:34:57.16:0,57,1240	0/0:35,0:35:63.21:0,63,1432	0/0:6,0:6:12.04:0,12,255	0/0:17,0:17:39.13:0,39,906	0/0:23,0:23:30.57:0,31,700	0/0:25,0:25:42.14:0,42,975	1/1:8,12:21:27.09:418,27,0	1/1:8,15:23:39.13:603,39,0	0/0:16,0:16:27.05:0,27,557	1/1:10,11:20:21.07:324,21,0	1/1:9,6:14:18.06:278,18,0	1/1:6,8:14:18.06:278,18,0	1/1:3,4:7:12.04:186,12,0	0/0:6,0:6:6.02:0,6,114	0/0:10,0:10:21.07:0,21,484	0/0:24,0:24:33.11:0,33,762	0/0:21,0:21:39.13:0,39,910	0/0:14,0:23:33.09:0,33,539	0/0:10,0:18:24.08:0,24,416	0/0:12,0:12:18.03:0,18,373
chr10	15371663	.	T	TTTA	3202.17	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=6.705;DP=371;FS=2.524;HRun=0;HaplotypeScore=61.7417;InbreedingCoeff=0.9624;MQ=72.51;MQ0=0;MQRankSum=-3.238;QD=45.10;ReadPosRankSum=-2.025;VQSLOD=4.5279;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:51.50:0,51,1000	0/0:6,0:6:18.02:0,18,261	0/0:12,0:9:23.85:0,24,292	0/0:15,0:14:39.13:0,39,611	0/0:19,0:19:57.17:0,57,966	0/0:15,0:15:36.11:0,36,610	0/0:6,0:6:15.03:0,15,230	0/0:27,0:27:81.24:0,81,1361	0/0:8,0:8:21.07:0,21,377	0/0:19,0:19:57.18:0,57,943	0/0:16,0:16:45.15:0,45,808	0/0:11,0:11:30.06:0,30,448	0/0:10,0:10:30.10:0,30,537	0/0:8,0:8:24.07:0,24,399	1/1:8,0:8:24.07:440,24,0	1/1:7,2:10:27.09:573,27,0	0/0:23,0:23:63.22:0,63,1131	1/1:16,0:16:45.08:681,45,0	1/1:11,2:13:39.10:689,39,0	1/1:9,1:10:30.09:525,30,0	1/1:13,0:13:32.44:482,32,0	0/0:5,0:5:12.04:0,12,215	0/0:14,0:14:30.07:0,30,478	0/0:5,0:5:15.03:0,15,239	0/0:27,0:27:81.26:0,81,1395	0/0:17,0:17:51.17:0,51,890	0/0:15,0:15:39.13:0,39,682	0/0:2,0:2:6.02:0,6,108
chr10	15372944	.	AGGC	A	2896.35	PASS	AB=0.831;AC=7;AF=0.125;AN=56;BaseQRankSum=11.519;DP=888;FS=12.507;HRun=0;HaplotypeScore=182.9027;InbreedingCoeff=-0.1521;MQ=51.82;MQ0=23;MQRankSum=-11.021;QD=13.05;ReadPosRankSum=2.077;VQSLOD=2.4546;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:31,1:32:25.39:25,0,1753	0/0:24,0:24:72.23:0,72,1632	0/0:12,0:3:6.02:0,6,127	0/0:8,0:5:6.02:0,6,112	0/0:25,0:24:72.25:0,72,1770	0/0:31,0:31:90.18:0,90,2113	0/0:45,0:45:99:0,132,3018	0/0:25,0:22:66.21:0,66,1495	0/0:42,0:42:99:0,126,2990	0/0:54,0:54:99:0,156,3707	0/0:19,0:19:57.20:0,57,1331	0/0:42,0:42:99:0,120,2827	0/0:36,0:36:99:0,108,2575	0/0:41,0:41:99:0,120,2836	0/1:19,33:48:99:1593,0,518	0/1:6,7:10:99:307,0,117	0/0:45,1:46:79.91:0,80,2621	0/1:12,1:12:34:34,0,523	0/1:23,0:11:25.89:26,0,393	0/1:37,20:53:99:924,0,1844	0/1:29,3:28:99:117,0,788	0/0:35,0:35:99:0,99,2334	0/0:18,0:18:54.19:0,54,1283	0/0:54,0:54:99:0,147,3298	0/0:18,0:17:48.15:0,48,1093	0/0:47,0:46:99:0,135,3197	0/0:33,0:32:96.29:0,96,2169	0/0:11,0:11:33.10:0,33,651
chr10	15373036	.	G	GA	2224.99	PASS	AB=0.735;AC=5;AF=0.089;AN=56;BaseQRankSum=8.650;DP=874;FS=59.727;HRun=2;HaplotypeScore=147.3228;InbreedingCoeff=-0.1006;MQ=48.58;MQ0=42;MQRankSum=-8.221;QD=15.03;ReadPosRankSum=0.466;VQSLOD=0.0705;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:43:99:0,118,1452	0/0:20,0:20:56.95:0,57,668	0/0:25,0:8:6.90:0,7,153	0/0:22,0:5:15.02:0,15,159	0/0:28,0:24:48.15:0,48,594	0/0:23,0:22:60.17:0,60,721	0/0:42,0:31:69.12:0,69,822	0/0:33,0:22:60.16:0,60,715	0/0:45,0:37:93.25:0,93,1105	0/0:48,0:37:96.24:0,96,1156	0/0:24,0:22:54.15:0,54,649	0/0:36,0:36:98.96:0,99,1211	0/0:30,0:30:78.25:0,78,964	0/0:26,0:26:75.20:0,75,894	0/1:21,20:39:99:764,0,390	0/1:19,17:35:99:680,0,293	0/0:55,0:52:99:0,130,1597	0/1:13,4:15:99:113,0,261	0/1:16,4:7:21.89:153,0,22	0/1:18,15:31:99:633,0,347	0/0:18,2:16:23.27:0,23,285	0/0:27,0:27:81.24:0,81,991	0/0:30,0:30:84.26:0,84,1028	0/0:45,0:45:99:0,108,1403	0/0:26,0:26:71.97:0,72,835	0/0:49,0:45:99:0,126,1542	0/0:21,0:18:51.04:0,51,597	0/0:7,0:6:14.94:0,15,149
chr10	15373050	.	GA	G	1919.75	PASS	AB=0.800;AC=9;AF=0.161;AN=56;BaseQRankSum=13.145;DP=851;FS=25.085;HRun=4;HaplotypeScore=143.5951;InbreedingCoeff=0.5896;MQ=50.58;MQ0=23;MQRankSum=-11.683;QD=13.62;ReadPosRankSum=1.484;VQSLOD=1.6646;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:44:99:0,116,1631	0/0:21,0:21:57.17:0,57,763	0/0:25,0:9:16.12:0,16,197	0/0:20,0:5:11.86:0,12,116	0/0:31,0:27:63.21:0,63,876	0/0:24,0:23:57.18:0,57,781	0/0:37,0:26:69.19:0,69,943	0/0:21,0:14:33.11:0,33,460	0/0:48,0:40:93.26:0,93,1233	0/0:45,0:35:93.30:0,93,1272	0/0:19,0:17:42.14:0,42,588	0/0:37,0:37:99:0,105,1465	0/0:32,0:32:87.27:0,87,1182	0/0:29,0:29:84.28:0,84,1167	1/1:14,23:35:63.64:725,64,0	1/1:15,16:29:56.67:566,57,0	0/0:50,0:47:99:0,125,1722	0/1:11,6:16:99:150,0,221	0/1:8,3:5:29.97:96,0,30	1/1:11,12:22:42.67:474,43,0	0/1:18,3:17:25.51:69,0,26	0/0:31,0:31:90.28:0,90,1226	0/0:34,0:34:93.31:0,93,1302	0/0:41,1:42:99:0,112,1567	0/0:34,0:34:99:0,99,1381	0/0:52,0:48:99:0,141,1968	0/0:25,0:21:54.12:0,54,702	0/0:7,0:6:12.04:0,12,167
chr10	15373160	.	AAGGC	A	188.93	PASS	AB=0.833;AC=3;AF=0.054;AN=56;BaseQRankSum=5.101;DP=867;FS=13.945;HRun=0;HaplotypeScore=190.0178;InbreedingCoeff=0.3460;MQ=51.28;MQ0=43;MQRankSum=-4.239;QD=3.94;ReadPosRankSum=0.034;VQSLOD=1.9159;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:41:98.17:0,98,2374	0/0:12,0:11:5.82:0,6,212	1/1:18,0:3:2.90:16,3,0	0/0:8,0:2:6:0,6,84	0/0:31,0:31:84.22:0,84,2030	0/0:19,0:18:54.12:0,54,1275	0/0:38,0:34:93.16:0,93,1798	0/0:31,0:19:54.11:0,54,1055	0/0:48,0:48:67.47:0,67,1038	0/0:42,0:39:99:0,108,1968	0/0:19,0:19:33.08:0,33,504	0/0:39,0:39:73.85:0,74,2315	0/0:38,0:38:99:0,114,2656	0/0:37,0:37:99:0,111,2693	0/0:45,0:41:85.42:0,85,2006	0/0:50,1:46:64.94:0,65,2492	0/0:30,0:30:72.27:0,72,1263	0/1:24,6:29:99:261,0,1261	0/0:31,0:13:39.08:0,39,861	0/0:25,0:21:60.14:0,60,1391	0/0:37,0:29:43.80:0,44,1143	0/0:36,0:34:96.29:0,96,2227	0/0:36,0:36:99:0,102,2250	0/0:41,0:41:99:0,114,2590	0/0:31,0:30:86.83:0,87,1935	0/0:35,0:33:93.20:0,93,1972	0/0:14,0:14:42.06:0,42,840	0/0:3,0:3:3.01:0,3,48
chr10	15373180	.	GAAGGAAAGGAAGGA	G	8481.06	PASS	AB=0.962;AC=19;AF=0.339;AN=56;BaseQRankSum=12.823;DP=834;FS=2.585;HRun=0;HaplotypeScore=307.0320;InbreedingCoeff=0.8157;MQ=52.23;MQ0=29;MQRankSum=5.355;QD=33.65;ReadPosRankSum=-4.959;VQSLOD=2.4860;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:46:90.59:0,91,4272	1/1:3,10:12:12.04:309,12,0	1/1:25,0:2:2.72:12,3,0	0/0:12,0:2:6.02:0,6,224	0/0:30,0:30:84.21:0,84,3848	0/0:21,0:21:57.12:0,57,2323	0/0:31,0:29:66.16:0,66,2534	1/1:14,0:5:5.99:49,6,0	1/1:5,51:56:18.06:739,18,0	1/1:6,40:45:99:2794,110,0	1/1:0,18:18:35.88:798,36,0	0/0:30,0:30:46.09:0,46,3136	0/0:35,0:35:99:0,103,4056	0/0:39,0:39:99:0,114,5251	0/0:41,0:40:99:0,101,4454	0/0:52,0:50:99:0,135,5418	0/1:24,1:25:29.24:932,0,29	0/0:29,0:28:35.92:0,36,2184	0/0:15,0:11:29.98:0,30,1003	0/0:29,0:24:69.13:0,69,1933	0/0:32,0:27:2.48:0,2,1633	0/0:33,0:32:90.30:0,90,4189	0/0:31,0:31:87.28:0,87,3817	0/0:46,0:46:78.31:0,78,4316	0/0:28,0:28:48.51:0,49,3230	1/1:5,36:40:99:2302,105,0	1/1:9,0:8:18.04:362,18,0	1/1:4,0:4:9.03:184,9,0
chr10	15373193	.	GA	G	2995.25	PASS	AB=0.952;AC=20;AF=0.357;AN=56;BaseQRankSum=15.026;DP=812;FS=1.195;HRun=3;HaplotypeScore=133.4837;InbreedingCoeff=0.8403;MQ=52.42;MQ0=35;MQRankSum=3.025;QD=11.79;ReadPosRankSum=-4.075;VQSLOD=0.6534;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,1:46:74.17:0,74,1660	1/1:10,0:10:11.97:119,12,0	0/1:28,0:2:0:0,0,0	0/0:14,0:2:6.02:0,6,86	0/0:32,0:32:90.24:0,90,1250	0/0:18,0:18:51.17:0,51,733	0/0:29,0:27:66.22:0,66,937	1/1:5,2:1:3:26,3,0	1/1:51,0:51:17.61:148,18,0	1/1:41,1:41:94.51:805,95,0	1/1:18,0:18:29.01:274,29,0	0/0:29,1:30:47.59:0,48,1102	0/0:41,0:41:99:0,117,1625	0/0:43,0:43:99:0,126,1740	0/0:44,0:41:99:0,108,1627	0/0:48,1:47:99:0,132,1895	1/1:10,10:20:43.16:554,43,0	0/0:26,1:27:31.44:0,31,866	0/0:16,0:10:24.03:0,24,322	0/0:26,0:22:60.20:0,60,853	0/1:25,3:26:21.29:21,0,738	0/0:38,0:38:99:0,105,1475	0/0:31,0:31:87.29:0,87,1251	0/0:42,5:47:63.27:0,63,1554	0/0:25,0:25:40.89:0,41,933	1/1:37,0:36:86.26:938,86,0	1/1:2,5:6:14.96:167,15,0	1/1:1,5:5:12.04:148,12,0
chr10	15373342	.	GAAGA	G	1450.70	PASS	AB=0.962;AC=7;AF=0.125;AN=56;BaseQRankSum=5.577;DP=985;FS=2.804;HRun=0;HaplotypeScore=202.8544;InbreedingCoeff=0.1185;MQ=52.39;MQ0=23;MQRankSum=-3.933;QD=7.40;ReadPosRankSum=-6.277;VQSLOD=0.7766;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,99,2394	0/0:20,0:18:54.08:0,54,1222	0/0:29,0:10:23.99:0,24,351	0/0:23,0:7:17.25:0,17,225	0/0:45,0:45:99:0,132,2864	0/0:24,0:24:69.21:0,69,1592	0/0:24,0:22:62.93:0,63,1336	0/0:26,0:21:57.58:0,58,1012	0/0:54,0:54:99:0,147,3669	0/0:49,0:49:99:0,135,3203	0/0:37,0:36:99:0,99,2116	0/0:36,0:36:99:0,99,2506	0/0:40,0:40:99:0,117,2812	0/0:37,0:37:99:0,111,2610	0/1:42,4:46:99:322,0,517	0/1:50,5:54:99:472,0,683	0/0:71,0:71:99:0,155,4394	0/1:18,0:19:99:226,0,175	1/1:14,1:10:5.41:226,5,0	0/1:24,0:25:99:186,0,249	0/1:31,1:28:99:149,0,344	0/0:40,0:40:99:0,120,2879	0/0:34,0:34:84.33:0,84,2289	0/0:51,0:51:99:0,115,3036	0/0:29,0:28:81.27:0,81,2008	0/0:54,0:54:99:0,153,3505	0/0:24,0:23:69.22:0,69,1734	0/0:4,0:4:12.03:0,12,271
chr10	15373503	.	GAAGGAAGGA	G	1261.41	PASS	AB=0.927;AC=4;AF=0.077;AN=52;BaseQRankSum=5.619;DP=921;FS=0.736;HRun=0;HaplotypeScore=273.5499;InbreedingCoeff=0.4508;MQ=52.13;MQ0=28;MQRankSum=-5.331;QD=16.17;ReadPosRankSum=-2.299;VQSLOD=1.8509;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:34.19:0,34,2679	0/0:10,0:10:21.07:0,21,721	./.	./.	0/0:26,0:26:63.22:0,63,2138	0/0:22,0:21:48.16:0,48,1565	0/0:30,0:28:69.21:0,69,2009	0/0:30,0:26:39.11:0,39,787	0/0:49,0:49:99:0,132,4506	0/0:35,0:34:72.24:0,72,2159	0/0:27,0:26:57.19:0,57,1815	0/0:41,0:41:99:0,105,3714	0/0:43,0:43:99:0,108,3763	0/0:28,0:28:60.20:0,60,1973	0/0:64,0:58:99:0,142,4084	0/0:52,0:45:99:0,105,3116	0/0:45,0:43:99:0,102,3004	0/0:42,0:39:87.60:0,88,2454	1/1:23,3:12:18.02:390,18,0	0/1:21,3:22:99:812,0,315	0/1:27,1:25:99:172,0,378	0/0:33,0:33:78.25:0,78,2355	0/0:35,0:35:76.40:0,76,2351	0/0:65,0:65:69.85:0,70,4490	0/0:30,0:30:81.25:0,81,2448	0/0:39,0:38:99:0,102,3387	0/0:28,0:28:66.23:0,66,2271	0/0:11,0:10:30.10:0,30,994
chr10	15373512	.	A	AAAGG	1199.84	PASS	AB=0.935;AC=4;AF=0.077;AN=52;BaseQRankSum=7.492;DP=915;FS=1.339;HRun=0;HaplotypeScore=189.1401;InbreedingCoeff=0.3498;MQ=51.92;MQ0=38;MQRankSum=-5.196;QD=14.63;ReadPosRankSum=-3.917;VQSLOD=2.8720;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:63.01:0,63,1270	0/0:12,0:12:21.07:0,21,368	./.	./.	0/0:26,0:26:66.23:0,66,1121	0/0:22,0:21:54.17:0,54,885	0/0:31,0:29:72.22:0,72,1173	0/0:26,0:21:45:0,45,625	0/0:50,0:50:99:0,144,2404	0/0:32,0:32:76.48:0,76,1286	0/0:27,0:26:60.19:0,60,964	0/0:43,0:43:99:0,114,1879	0/0:42,0:42:99:0,117,1945	0/0:25,0:25:63.21:0,63,1041	0/0:64,0:58:99:0,140,2259	0/0:54,0:46:99:0,117,1849	0/0:42,0:40:98.14:0,98,1623	0/0:38,0:35:92.42:0,92,1420	1/1:27,1:9:4.64:233,5,0	0/1:23,4:25:99:762,0,135	0/1:27,0:24:99:308,0,130	0/0:35,0:35:93.27:0,93,1461	0/0:31,0:31:81.18:0,81,1342	0/0:64,0:64:99:0,112,2492	0/0:31,0:31:81.25:0,81,1347	0/0:38,0:37:99:0,108,1836	0/0:28,0:28:69.22:0,69,1175	0/0:14,0:13:36.12:0,36,619
chr10	15373587	.	CAGGAAGGAAAGGAAGGCAGGA	C	10719.63	PASS	AB=0.952;AC=17;AF=0.304;AN=56;BaseQRankSum=7.504;DP=842;FS=9.928;HRun=0;HaplotypeScore=445.1898;InbreedingCoeff=0.8496;MQ=52.63;MQ0=15;MQRankSum=-3.581;QD=45.81;ReadPosRankSum=0.522;VQSLOD=2.0200;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,99,4910	1/1:6,0:6:15.05:471,15,0	0/0:13,0:5:9.03:0,9,175	0/0:13,0:10:6.01:0,6,196	0/0:33,0:33:84.26:0,84,4749	0/0:22,0:22:51.17:0,51,2664	0/0:21,0:21:51.17:0,51,2493	1/1:29,0:25:36.10:753,36,0	1/1:34,3:36:78.27:2737,78,0	1/1:8,32:39:68.34:1644,68,0	1/1:5,23:28:18.02:696,18,0	0/0:30,0:30:84.29:0,84,4692	0/0:46,0:46:99:0,105,5904	0/0:28,0:27:72.25:0,72,4313	0/0:50,0:43:82.10:0,82,3328	0/0:52,0:46:74.51:0,75,3346	0/1:19,1:17:99:940,0,112	0/0:20,0:18:35.46:0,35,1668	0/0:19,0:13:22.29:0,22,1032	0/0:30,0:28:75.70:0,76,2453	0/0:26,0:24:9.11:0,9,1319	0/0:46,0:45:99:0,99,5527	0/0:31,0:31:75.26:0,75,4518	0/0:58,0:58:99:0,141,7154	0/0:31,0:31:75.21:0,75,3498	1/1:5,29:34:84.27:2966,84,0	1/1:5,24:29:6.01:195,6,0	1/1:11,0:10:9.03:318,9,0
chr10	15373596	.	AAGGAAGGC	A	3591.72	PASS	AB=0.963;AC=16;AF=0.286;AN=56;BaseQRankSum=8.836;DP=816;FS=2.389;HRun=0;HaplotypeScore=259.4802;InbreedingCoeff=-0.2236;MQ=52.17;MQ0=16;MQRankSum=-6.497;QD=8.80;ReadPosRankSum=2.015;VQSLOD=2.3858;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,100,3762	0/1:5,0:5:14.02:58,0,14	0/0:16,0:9:21.04:0,21,573	0/0:11,0:5:3.48:0,3,130	0/0:35,0:35:93.31:0,93,3601	0/0:19,0:19:51.01:0,51,1912	0/0:21,0:21:54.14:0,54,1823	0/1:23,0:18:22.30:22,0,35	0/1:33,0:32:99:394,0,120	0/1:36,0:35:27.22:27,0,221	0/1:26,0:26:1.98:176,0,2	0/0:33,0:33:99:0,99,3589	0/0:43,0:43:99:0,111,4306	0/0:28,0:27:78.18:0,78,2947	0/1:40,7:40:99:599,0,2702	0/1:42,9:45:99:738,0,2747	0/1:19,0:17:99:125,0,172	0/1:20,0:18:99:137,0,1322	0/1:21,3:16:99:255,0,1008	0/1:24,4:26:99:437,0,1896	0/1:29,0:26:52.36:52,0,1288	0/0:43,0:42:99:0,102,3829	0/0:32,0:32:90.31:0,90,3564	0/0:56,0:56:99:0,153,5471	0/0:32,0:32:84.25:0,84,2911	0/1:33,0:33:99:464,0,133	1/1:25,0:25:2.95:55,3,0	0/1:9,0:8:16.88:51,0,17
chr10	15373599	.	G	GA	1665.08	PASS	AB=0.926;AC=14;AF=0.250;AN=56;BaseQRankSum=10.996;DP=799;FS=9.175;HRun=2;HaplotypeScore=168.0160;InbreedingCoeff=0.5302;MQ=52.35;MQ0=15;MQRankSum=-4.381;QD=8.45;ReadPosRankSum=-0.052;VQSLOD=0.3378;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,105,1343	1/1:5,0:5:9.76:126,10,0	0/0:13,0:8:21.06:0,21,258	0/0:10,0:4:8.98:0,9,83	0/0:34,0:34:99:0,99,1200	0/0:20,0:20:52.04:0,52,634	0/0:22,1:23:33.18:0,33,654	1/1:7,13:17:34.34:370,34,0	0/1:29,2:31:55.78:404,0,56	0/1:34,0:34:19.73:227,0,20	1/1:25,0:25:7.44:73,7,0	0/0:33,0:33:99:0,99,1226	0/0:41,0:41:99:0,114,1402	0/0:29,0:28:81.24:0,81,990	0/0:48,0:41:99:0,102,1120	0/0:49,0:43:99:0,101,1151	0/1:14,4:17:15.37:196,0,15	0/0:20,0:18:51.06:0,51,573	0/0:24,0:16:46.87:0,47,520	0/0:29,0:27:78.68:0,79,855	0/0:29,0:26:57.54:0,58,636	0/0:41,0:40:99:0,108,1314	0/0:31,0:31:90.28:0,90,1114	0/0:55,0:55:99:0,159,1933	0/0:32,0:32:90.24:0,90,1078	0/1:30,0:30:34.36:336,0,34	1/1:25,0:25:2.68:12,3,0	1/1:4,1:5:8.78:90,9,0
chr10	15373601	.	AGGC	A	3834.86	PASS	AB=0.953;AC=20;AF=0.357;AN=56;BaseQRankSum=13.934;DP=771;FS=5.205;HRun=0;HaplotypeScore=180.7147;InbreedingCoeff=0.4541;MQ=52.59;MQ0=12;MQRankSum=-5.289;QD=11.62;ReadPosRankSum=2.028;VQSLOD=3.1249;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:97.89:0,98,2579	1/1:1,5:6:10.87:209,11,0	0/0:14,0:8:21.07:0,21,461	0/0:8,0:3:9.01:0,9,124	0/0:33,0:33:99:0,99,2290	0/0:19,0:19:29.42:0,29,1196	0/0:21,0:21:63.20:0,63,1413	1/1:16,0:13:17.03:422,17,0	1/1:20,9:29:33.94:781,34,0	1/1:32,0:32:36.86:773,37,0	1/1:23,0:23:0.32:126,0,0	0/0:33,0:33:99:0,99,2376	0/0:40,0:40:99:0,117,2736	0/0:28,0:27:81.28:0,81,1931	0/1:46,0:39:29.26:29,0,1776	0/1:47,0:42:36.47:36,0,1722	0/1:16,3:18:60.58:369,0,61	0/0:19,0:17:5.46:0,5,852	0/1:24,0:16:20.05:20,0,757	0/1:29,0:27:13.03:13,0,1261	0/0:28,0:25:53.16:0,53,979	0/0:40,0:39:99:0,111,2597	0/0:31,0:31:90.31:0,90,2179	0/0:55,0:55:99:0,162,3715	0/0:30,0:30:90.27:0,90,2005	1/1:29,0:29:55.30:891,55,0	1/1:24,0:24:2.82:20,3,0	0/1:5,1:5:4.82:145,0,5
chr10	15373604	.	CAGGA	C	2512.48	PASS	AB=0.920;AC=17;AF=0.304;AN=56;BaseQRankSum=10.247;DP=756;FS=3.075;HRun=0;HaplotypeScore=196.3975;InbreedingCoeff=0.0546;MQ=52.59;MQ0=9;MQRankSum=-5.451;QD=7.37;ReadPosRankSum=-1.843;VQSLOD=2.7824;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,100,2321	0/1:5,1:6:11.69:45,0,12	0/0:14,0:7:18.03:0,18,405	0/0:7,0:2:3.48:0,3,78	0/0:31,0:31:87.30:0,87,2166	0/0:19,0:19:50.97:0,51,1155	0/0:21,0:21:54.17:0,54,1208	0/1:11,1:9:35.93:123,0,36	0/1:17,10:27:7.41:674,0,7	0/1:33,0:32:33.86:310,0,34	1/1:23,0:23:15.05:196,15,0	0/0:34,0:34:87.25:0,87,1968	0/0:38,0:38:99:0,105,2520	0/0:28,0:27:69.22:0,69,1687	0/1:45,0:38:64.27:64,0,1733	0/1:47,0:42:80.96:81,0,1757	0/1:16,2:17:31.68:377,0,32	0/1:19,0:17:5.56:6,0,907	0/1:23,0:17:29.09:29,0,746	0/1:30,0:28:40.68:41,0,1230	0/0:29,0:26:29.23:0,29,891	0/0:40,0:39:96.31:0,96,2312	0/0:31,0:31:87.30:0,87,2155	0/0:54,0:54:99:0,130,3145	0/0:28,0:28:75.22:0,75,1619	1/1:29,0:29:8.81:635,9,0	1/1:24,0:24:6.01:72,6,0	0/1:3,1:5:14.21:29,0,14
chr10	15373691	.	AGAGG	A	745.62	PASS	AB=0.880;AC=6;AF=0.107;AN=56;BaseQRankSum=8.091;DP=735;FS=21.159;HRun=0;HaplotypeScore=145.8486;InbreedingCoeff=-0.1196;MQ=54.71;MQ0=10;MQRankSum=-7.914;QD=7.17;ReadPosRankSum=0.169;VQSLOD=1.3965;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,123,3064	0/0:11,0:11:33.11:0,33,954	0/0:27,0:12:26.61:0,27,464	0/0:24,0:10:25.25:0,25,387	0/0:27,0:27:81.20:0,81,1954	0/0:15,0:15:45.06:0,45,1168	0/0:25,0:25:75.15:0,75,1771	0/0:37,0:35:99:0,99,2187	0/0:34,0:33:93.21:0,93,2404	0/0:50,0:50:99:0,147,3872	0/0:25,0:25:69.08:0,69,1764	0/0:26,0:26:78.25:0,78,2060	0/0:32,0:31:93.29:0,93,2310	0/0:23,0:22:65:0,65,1638	0/1:24,6:28:99:287,0,940	0/1:13,2:15:82.47:82,0,604	0/0:39,0:44:99:0,112,2778	0/1:12,1:10:99:114,0,122	0/1:12,0:8:15.62:16,0,161	0/1:11,1:11:40.91:41,0,323	0/1:13,8:19:99:331,0,162	0/0:28,0:28:66.16:0,66,1886	0/0:21,0:21:60.15:0,60,1427	0/0:31,0:34:93.11:0,93,2546	0/0:26,0:27:78.24:0,78,2116	0/0:40,0:40:99:0,120,3168	0/0:28,0:28:75.15:0,75,1866	0/0:9,0:9:27.05:0,27,669
chr10	15373712	.	G	GA	659.14	PASS	AB=0.817;AC=8;AF=0.143;AN=56;BaseQRankSum=8.897;DP=718;FS=16.840;HRun=0;HaplotypeScore=104.7197;InbreedingCoeff=0.0462;MQ=55.92;MQ0=4;MQRankSum=-6.649;QD=6.66;ReadPosRankSum=-0.536;VQSLOD=2.3240;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,117,1635	0/0:10,0:10:30.10:0,30,419	0/0:21,1:10:23.69:0,24,314	0/1:21,0:11:10.62:11,0,239	0/0:23,0:23:69.23:0,69,962	0/0:23,0:23:69.23:0,69,962	0/0:24,0:24:66.22:0,66,922	0/0:30,0:29:84.25:0,84,1135	0/0:36,0:35:99:0,99,1348	0/0:47,0:47:99:0,135,1887	0/0:25,0:25:72.23:0,72,990	0/0:28,0:28:84.28:0,84,1173	0/0:35,0:34:99:0,99,1305	0/0:27,0:26:57.48:0,57,973	0/1:14,6:19:92.79:305,0,93	0/1:7,3:9:67.26:131,0,67	0/0:44,0:43:99:0,108,1568	0/1:13,3:12:45.20:45,0,237	1/1:3,2:1:3.01:42,3,0	0/1:4,6:9:57.47:191,0,57	0/1:15,2:14:66.24:66,0,233	0/0:25,0:25:72.22:0,72,988	0/0:22,0:22:66.19:0,66,887	0/0:43,0:43:99:0,105,1629	0/0:32,0:32:90.30:0,90,1258	0/0:43,0:43:99:0,122,1662	0/0:30,0:30:87.23:0,87,1176	0/0:9,0:9:27.09:0,27,377
chr10	15373761	.	AAGGC	A	751.12	PASS	AB=0.867;AC=9;AF=0.161;AN=56;BaseQRankSum=10.250;DP=724;FS=14.555;HRun=0;HaplotypeScore=145.7918;InbreedingCoeff=0.4589;MQ=57.83;MQ0=12;MQRankSum=-9.565;QD=8.94;ReadPosRankSum=-1.997;VQSLOD=1.8996;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,107,2316	0/0:14,0:14:42.12:0,42,1021	0/0:34,0:16:40.06:0,40,479	0/0:25,0:13:21.80:0,22,401	0/0:14,0:14:42.13:0,42,991	0/0:24,0:24:63.22:0,63,1668	0/0:35,0:35:80.55:0,81,2335	0/0:36,0:34:99:0,99,1877	0/0:32,0:32:84.29:0,84,2084	0/0:30,0:30:78.24:0,78,1759	0/0:27,0:27:51.45:0,51,1658	0/0:25,0:25:69.24:0,69,1800	0/0:30,0:29:81.24:0,81,2013	0/0:23,0:22:63.22:0,63,1609	1/1:15,1:16:33.14:305,33,0	1/1:13,1:11:0.81:232,1,0	0/0:40,0:39:99:0,111,2640	0/1:12,1:10:71.03:71,0,288	1/1:17,1:7:3.01:39,3,0	0/1:9,4:12:89.65:168,0,90	0/1:9,1:7:76.71:77,0,97	0/0:24,0:24:72.20:0,72,1622	0/0:25,0:25:75.19:0,75,1740	0/0:46,0:46:99:0,101,2868	0/0:24,0:24:69.19:0,69,1615	0/0:42,0:42:99:0,114,2693	0/0:33,0:33:96.30:0,96,2313	0/0:18,0:18:54.16:0,54,1385
chr10	15373762	.	AGGC	A	671.43	PASS	AB=0.888;AC=8;AF=0.143;AN=56;BaseQRankSum=10.530;DP=719;FS=25.145;HRun=0;HaplotypeScore=131.1164;InbreedingCoeff=0.3396;MQ=57.18;MQ0=12;MQRankSum=-9.547;QD=7.99;ReadPosRankSum=0.247;VQSLOD=1.1271;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,111,2565	0/0:14,0:14:42.14:0,42,1011	0/0:32,0:15:36.69:0,37,657	0/0:27,0:13:28.19:0,28,560	0/0:14,0:14:42.14:0,42,1021	0/0:24,0:24:69.21:0,69,1602	0/0:33,0:34:96.04:0,96,2316	0/0:36,0:34:99:0,102,2351	0/0:31,0:31:87.28:0,87,2057	0/0:30,0:30:87.27:0,87,1973	0/0:26,0:26:78.04:0,78,1761	0/0:25,0:25:75.23:0,75,1741	0/0:30,0:29:84.27:0,84,1973	0/0:23,0:22:63.22:0,63,1550	1/1:16,0:16:47.38:347,47,0	0/1:11,3:11:28.97:227,0,29	0/0:41,0:40:99:0,114,2736	0/1:13,0:10:40.82:41,0,359	1/1:17,0:6:2.74:12,3,0	0/1:10,3:12:99:136,0,164	0/1:10,1:8:45.93:46,0,101	0/0:24,0:24:72.25:0,72,1733	0/0:25,0:25:75.26:0,75,1815	0/0:46,0:46:78.69:0,79,2968	0/0:25,0:25:75.24:0,75,1714	0/0:41,0:41:99:0,123,2810	0/0:32,0:32:96.33:0,96,2329	0/0:18,0:18:54.19:0,54,1315
chr10	15373764	.	G	GA	1012.33	PASS	AB=0.786;AC=8;AF=0.143;AN=56;BaseQRankSum=10.273;DP=718;FS=19.953;HRun=0;HaplotypeScore=103.6827;InbreedingCoeff=0.3845;MQ=56.43;MQ0=11;MQRankSum=-8.957;QD=11.91;ReadPosRankSum=0.293;VQSLOD=2.6251;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,108,1498	0/0:14,0:14:42.14:0,42,587	0/0:31,0:14:38.45:0,38,451	0/0:26,0:13:30.23:0,30,357	0/0:15,0:15:42.14:0,42,587	0/0:23,0:23:66.20:0,66,903	0/0:34,0:34:96.78:0,97,1324	0/0:37,0:35:99:0,102,1387	0/0:30,0:30:87.27:0,87,1183	0/0:28,0:28:78.26:0,78,1091	0/0:25,0:25:75.24:0,75,1030	0/0:23,0:23:69.23:0,69,958	0/0:29,0:28:81.25:0,81,1108	0/0:23,0:22:63.21:0,63,880	1/1:2,14:16:48.06:513,48,0	0/1:9,6:12:5.98:285,0,6	0/0:41,0:40:99:0,114,1574	0/1:11,2:10:44.76:45,0,225	1/1:16,0:5:2.63:22,3,0	0/1:10,4:13:80.41:217,0,80	0/1:8,3:8:44.39:69,0,44	0/0:25,0:25:75.24:0,75,1031	0/0:25,0:25:75.25:0,75,1047	0/0:46,0:46:99:0,102,1732	0/0:27,0:27:78.23:0,78,1037	0/0:40,0:40:99:0,117,1609	0/0:34,0:34:96.32:0,96,1338	0/0:19,0:19:54.18:0,54,753
chr10	15373772	.	GA	G	1307.48	PASS	AB=0.611;AC=9;AF=0.161;AN=56;BaseQRankSum=11.578;DP=689;FS=27.353;HRun=3;HaplotypeScore=102.3107;InbreedingCoeff=0.5963;MQ=57.72;MQ0=4;MQRankSum=-8.448;QD=15.75;ReadPosRankSum=-0.874;VQSLOD=1.9349;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,102,1453	0/0:14,0:14:42.14:0,42,603	0/0:27,0:11:20.83:0,21,336	0/0:24,1:13:19.56:0,20,379	0/0:19,0:19:57.15:0,57,763	0/0:28,0:28:78.22:0,78,1069	0/0:35,0:35:96.54:0,97,1415	0/0:26,0:25:69.23:0,69,977	0/0:30,0:30:84.28:0,84,1208	0/0:23,0:23:60.20:0,60,861	0/0:23,0:23:68.90:0,69,958	0/0:24,0:24:72.24:0,72,1032	0/0:30,0:29:84.27:0,84,1182	0/0:23,0:23:69.22:0,69,972	1/1:0,15:16:48.09:508,48,0	1/1:3,10:11:32.84:293,33,0	0/0:41,0:40:99:0,114,1627	0/1:8,4:10:99:119,0,100	1/1:9,3:7:14.94:141,15,0	0/1:1,10:15:75.64:267,0,76	0/1:3,9:12:24.27:138,0,24	0/0:22,0:22:57.19:0,57,809	0/0:25,0:25:66.21:0,66,932	0/0:42,1:43:99:0,119,1646	0/0:24,0:24:72.23:0,72,1015	0/0:35,0:35:99:0,102,1451	0/0:35,0:35:99:0,105,1462	0/0:19,0:19:57.19:0,57,820
chr10	15374005	.	CT	C	1164.44	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=14.029;DP=491;FS=38.681;HRun=1;HaplotypeScore=75.6707;InbreedingCoeff=0.9159;MQ=76.25;MQ0=1;MQRankSum=-2.003;QD=9.62;ReadPosRankSum=1.365;VQSLOD=-0.6149;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:69.24:0,69,1096	0/0:6,0:6:18.06:0,18,285	0/0:27,0:25:68.95:0,69,1039	0/0:22,0:16:17.79:0,18,572	0/0:9,0:9:27.08:0,27,406	0/0:13,0:13:39.13:0,39,621	0/0:17,0:17:51.15:0,51,769	0/0:36,0:36:99:0,105,1627	0/0:13,0:13:39.13:0,39,623	0/0:19,0:19:57.19:0,57,891	0/0:3,0:3:9.03:0,9,129	0/0:16,0:16:48.14:0,48,717	0/0:12,0:12:36.12:0,36,571	0/0:19,0:19:57.19:0,57,898	1/1:16,0:16:26.76:135,27,0	1/1:11,0:11:18.38:120,18,0	0/0:30,0:30:90.27:0,90,1383	1/1:29,0:29:60.20:289,60,0	1/1:28,2:28:70.54:440,71,0	0/1:7,0:6:1.43:17,0,1	1/1:26,2:28:57.79:341,58,0	0/0:10,0:10:30.09:0,30,455	0/0:14,0:14:42.12:0,42,625	0/0:21,0:21:63.20:0,63,983	0/0:5,0:5:15.05:0,15,240	0/0:24,0:24:69.22:0,69,1076	0/0:23,0:23:69.23:0,69,1082	0/0:8,0:8:24.08:0,24,383
chr10	15375071	.	T	TC	476.08	PASS	AB=0.958;AC=13;AF=0.241;AN=54;BaseQRankSum=6.373;DP=322;FS=5.652;HRun=1;HaplotypeScore=56.6941;InbreedingCoeff=0.5562;MQ=40.13;MQ0=37;MQRankSum=-3.613;QD=5.06;ReadPosRankSum=1.295;VQSLOD=0.5847;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:13:23.88:0,24,213	0/0:5,0:4:2.57:0,3,36	./.	0/0:2,0:1:2.88:0,3,15	0/0:17,0:12:14.97:0,15,136	0/0:15,0:15:18.97:0,19,227	0/0:13,0:12:20.81:0,21,169	0/0:15,0:14:13.81:0,14,166	0/0:8,0:7:0.63:0,1,65	0/0:12,0:9:14.75:0,15,136	0/1:11,0:11:2.40:2,0,59	0/0:13,0:12:27.03:0,27,273	0/0:9,0:9:20.99:0,21,226	0/0:14,0:13:29.95:0,30,279	1/1:4,7:9:11.82:121,12,0	1/1:7,4:10:17.41:140,17,0	0/0:16,0:13:4.46:0,4,127	0/1:12,2:11:10.36:20,0,10	1/1:7,7:11:23.84:207,24,0	1/1:1,5:8:2.96:24,3,0	1/1:10,1:9:14.86:116,15,0	0/0:10,0:7:14.99:0,15,150	0/0:12,0:9:20.95:0,21,195	0/1:13,0:12:7.69:8,0,112	0/0:17,0:17:38.81:0,39,359	0/0:14,0:12:11.64:0,12,137	0/0:10,0:9:22.23:0,22,189	0/0:9,0:7:11.73:0,12,100
chr10	15375342	.	C	CT	2202.02	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=9.044;DP=332;FS=6.530;HRun=8;HaplotypeScore=60.6336;InbreedingCoeff=0.8988;MQ=72.57;MQ0=3;MQRankSum=-4.021;QD=11.84;ReadPosRankSum=-0.454;VQSLOD=2.3527;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:77.77:0,78,675	1/1:5,0:5:8.92:65,9,0	0/0:14,0:13:23.63:0,24,172	0/0:13,0:4:5.77:0,6,36	0/0:8,0:7:18:0,18,160	0/0:12,0:12:26.99:0,27,247	0/0:11,0:11:27.01:0,27,247	1/1:35,0:34:41.82:414,42,0	1/1:12,0:12:30.14:184,30,0	1/1:12,0:12:24.44:167,24,0	1/1:7,0:7:17.58:111,18,0	0/0:5,0:6:17.05:0,17,143	0/0:7,0:7:18.01:0,18,165	0/0:5,0:5:11.99:0,12,104	1/1:3,6:10:20.80:185,21,0	1/1:3,7:10:15.42:207,15,0	1/1:27,0:27:54.12:380,54,0	1/1:5,0:5:2.96:19,3,0	1/1:7,0:9:7.13:47,7,0	1/1:2,0:3:2.96:19,3,0	1/1:10,0:14:20.20:116,20,0	0/0:6,0:6:15:0,15,137	0/0:8,0:8:23.96:0,24,207	0/0:14,0:14:39.01:0,39,353	0/0:11,0:11:29.86:0,30,239	1/1:15,0:15:41.35:287,41,0	1/1:12,0:12:21.66:133,22,0	1/1:6,0:6:14.52:89,15,0
chr10	15375350	.	TC	T	2609.69	PASS	AB=0.947;AC=31;AF=0.554;AN=56;BaseQRankSum=10.376;DP=317;FS=13.413;HRun=7;HaplotypeScore=55.0171;InbreedingCoeff=0.8477;MQ=75.33;MQ0=4;MQRankSum=-4.090;QD=14.26;ReadPosRankSum=0.249;VQSLOD=1.7587;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:30:72.13:0,72,837	1/1:1,2:3:6.01:61,6,0	0/0:15,1:12:20.77:0,21,212	0/1:17,1:6:0.30:0,0,28	0/0:7,0:6:15.05:0,15,185	0/0:11,0:11:30.09:0,30,371	0/0:10,0:10:30.08:0,30,360	1/1:4,23:27:59.85:562,60,0	1/1:2,9:11:30.04:296,30,0	1/1:3,7:10:20.92:190,21,0	1/1:2,5:7:17.93:168,18,0	0/0:6,0:6:13.94:0,14,171	0/0:6,0:6:18.06:0,18,223	0/0:8,0:8:21.04:0,21,226	1/1:8,0:8:11.19:37,11,0	1/1:11,0:11:17.95:71,18,0	1/1:4,24:29:56.15:555,56,0	1/1:4,0:4:5.78:32,6,0	1/1:6,0:4:0.55:9,1,0	1/1:3,0:2:4.15:19,4,0	1/1:10,0:9:9.58:27,10,0	0/0:6,0:6:15.05:0,15,185	0/0:9,0:8:18.05:0,18,217	0/0:13,0:13:36.11:0,36,445	0/0:11,0:11:9.03:0,9,111	1/1:3,14:17:41.87:391,42,0	1/1:3,8:11:26.82:244,27,0	1/1:3,4:7:17.92:159,18,0
chr10	15375454	.	A	AT	440.98	PASS	AB=0.800;AC=5;AF=0.096;AN=52;BaseQRankSum=-1.169;DP=374;FS=1.789;HRun=8;HaplotypeScore=41.0244;InbreedingCoeff=-0.0039;MQ=57.52;MQ0=16;MQRankSum=-0.479;QD=4.55;ReadPosRankSum=0.317;VQSLOD=-0.5475;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:29:65.62:0,66,586	0/0:6,0:5:12.01:0,12,109	0/1:13,0:6:0.01:0,0,0	0/0:13,0:7:11.68:0,12,93	0/0:14,0:14:27.01:0,27,247	0/0:6,0:5:12:0,12,110	0/0:8,0:8:18:0,18,165	0/0:35,0:34:87.04:0,87,795	0/0:5,0:5:12.01:0,12,110	0/0:11,0:9:24.01:0,24,220	0/0:9,0:9:18:0,18,165	0/0:1,0:1:3:0,3,27	0/0:5,0:3:9:0,9,82	./.	0/1:6,2:7:22.61:23,0,70	0/1:6,4:8:82.83:83,0,89	0/0:35,0:34:84.05:0,84,768	0/1:30,13:41:99:265,0,387	0/1:16,6:20:99:177,0,221	0/0:4,0:3:8.91:0,9,71	0/0:9,0:8:12:0,12,109	./.	0/0:5,0:5:9:0,9,82	0/0:16,0:14:23.39:0,23,219	0/0:10,0:10:24.01:0,24,220	0/0:19,0:18:51.02:0,51,466	0/0:14,0:14:36:0,36,324	0/0:16,0:16:21.01:0,21,192
chr10	15375769	.	A	AT	1947.10	PASS	AB=0.586;AC=11;AF=0.196;AN=56;BaseQRankSum=4.413;DP=489;FS=13.574;HRun=3;HaplotypeScore=55.7681;InbreedingCoeff=0.8960;MQ=81.01;MQ0=0;MQRankSum=-9.195;QD=23.18;ReadPosRankSum=-2.187;VQSLOD=1.6574;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,117,1378	0/0:4,0:4:9.03:0,9,108	0/0:23,0:23:48.90:0,49,622	0/0:34,0:34:86.69:0,87,1000	0/0:19,0:19:51.13:0,51,589	0/0:20,0:20:57.16:0,57,671	0/0:20,0:19:54.16:0,54,645	0/0:26,0:26:66.20:0,66,792	0/0:23,0:23:69.21:0,69,828	0/0:20,0:20:57.17:0,57,684	0/0:11,0:11:27.08:0,27,324	0/0:12,0:12:33.09:0,33,385	0/0:10,0:10:21.06:0,21,252	0/0:12,0:12:36.11:0,36,431	1/1:6,12:18:33.96:428,34,0	0/1:5,12:17:2.93:365,0,3	0/0:27,0:27:78.18:0,78,898	1/1:3,4:7:12.04:163,12,0	1/1:6,16:21:52.04:685,52,0	1/1:4,7:11:21.03:272,21,0	1/1:4,5:9:15.05:210,15,0	0/0:11,0:11:33.10:0,33,396	0/0:11,0:12:33.09:0,33,385	0/0:16,0:16:42.11:0,42,492	0/0:9,0:9:24.07:0,24,288	0/0:27,0:27:78.24:0,78,936	0/0:22,0:22:63.19:0,63,756	0/0:6,0:6:12.04:0,12,144
chr10	15375994	.	T	TCTC	2430.16	PASS	AB=0.781;AC=12;AF=0.214;AN=56;BaseQRankSum=7.238;DP=376;FS=1.552;HRun=0;HaplotypeScore=55.2208;InbreedingCoeff=0.7344;MQ=68.58;MQ0=7;MQRankSum=1.142;QD=22.50;ReadPosRankSum=2.290;VQSLOD=2.9985;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:27:72.19:0,72,1027	0/0:3,0:3:6.02:0,6,90	0/0:26,0:15:0.23:0,0,245	0/1:25,0:16:0.17:0,0,239	0/0:10,0:9:18.06:0,18,266	0/0:10,0:10:27.09:0,27,402	0/0:23,0:23:60.17:0,60,844	0/0:9,0:9:15.05:0,15,223	0/0:20,0:19:45.15:0,45,668	0/0:9,0:9:18.04:0,18,248	0/0:14,0:14:39.13:0,39,577	0/0:12,0:12:33.11:0,33,492	0/0:7,0:7:15.05:0,15,219	0/0:8,0:8:24.08:0,24,357	1/1:2,11:15:33.11:654,33,0	1/1:1,15:17:30.10:618,30,0	0/0:18,0:18:49.05:0,49,714	0/1:5,10:14:33.27:176,0,33	1/1:1,4:5:12.04:240,12,0	1/1:2,10:12:27.05:474,27,0	1/1:3,14:17:21.07:440,21,0	0/0:5,0:5:12.01:0,12,136	0/0:6,0:6:15.05:0,15,221	0/0:16,0:16:39.12:0,39,558	0/0:11,0:11:33.11:0,33,491	0/0:14,0:14:36.10:0,36,499	0/0:13,0:13:39.05:0,39,531	0/0:5,0:5:8.90:0,9,105
chr10	15376205	.	T	TA	3718.14	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-1.385;DP=611;FS=24.826;HRun=7;HaplotypeScore=60.8298;InbreedingCoeff=0.9895;MQ=65.24;MQ0=1;MQRankSum=-0.870;QD=28.82;ReadPosRankSum=-0.466;VQSLOD=1.7866;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:83.14:0,83,802	0/0:10,0:10:30.04:0,30,285	0/0:13,0:13:30:0,30,269	0/0:18,0:17:42.04:0,42,395	0/0:30,0:30:87.13:0,87,836	0/0:33,0:33:99:0,99,940	0/0:19,0:19:51.06:0,51,483	0/0:42,0:42:99:0,111,1050	0/0:23,0:23:63.06:0,63,593	0/0:35,0:35:99:0,99,956	0/0:28,0:28:75.08:0,75,715	0/0:16,0:16:42.05:0,42,400	0/0:13,0:13:36.03:0,36,337	0/0:10,0:10:30.05:0,30,290	1/1:7,14:21:36.11:435,36,0	1/1:2,14:16:10.15:406,10,0	0/0:21,0:21:57.01:0,57,533	1/1:2,14:16:42.13:507,42,0	1/1:4,24:25:69.10:759,69,0	1/1:0,29:29:87.18:1031,87,0	1/1:0,19:19:48.15:580,48,0	0/0:11,0:11:27.03:0,27,261	0/0:19,0:19:51.05:0,51,479	0/0:10,0:10:24.03:0,24,227	0/0:18,0:18:54.08:0,54,516	0/0:40,0:40:99:0,111,1059	0/0:31,0:31:93.14:0,93,894	0/0:10,0:10:30.05:0,30,288
chr10	15376560	.	G	GGA	2162.77	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=12.962;DP=923;FS=0.502;HRun=0;HaplotypeScore=153.8748;InbreedingCoeff=0.9587;MQ=58.90;MQ0=2;MQRankSum=-12.176;QD=21.63;ReadPosRankSum=-4.054;VQSLOD=3.1103;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,144,2333	0/0:15,0:15:39.10:0,39,578	0/0:42,0:33:93.13:0,93,1375	0/0:40,0:30:84.22:0,84,1264	0/0:42,0:42:99:0,126,2015	0/0:31,0:31:84.27:0,84,1346	0/0:42,0:42:99:0,117,1889	0/0:40,0:40:99:0,114,1752	0/0:45,0:45:99:0,135,2189	0/0:47,0:47:99:0,138,2206	0/0:28,0:28:81.28:0,81,1309	0/0:44,0:44:99:0,126,1977	0/0:37,0:37:99:0,111,1749	0/0:41,0:41:99:0,120,1917	1/1:8,19:25:57.18:759,57,0	1/1:9,14:20:5.13:603,5,0	0/0:31,0:31:84.17:0,84,1298	1/1:7,7:14:26.96:363,27,0	1/1:2,4:6:18.06:263,18,0	1/1:1,6:7:9:108,9,0	1/1:8,15:22:17.85:245,18,0	0/0:30,0:30:90.31:0,90,1456	0/0:26,0:26:75.24:0,75,1199	0/0:72,1:73:99:0,202,3178	0/0:20,0:20:54.18:0,54,881	0/0:41,0:41:99:0,123,1979	0/0:33,0:33:87.28:0,87,1379	0/0:24,0:24:67.15:0,67,1046
chr10	15376566	.	GTAT	G	1430.37	PASS	AB=0.821;AC=11;AF=0.196;AN=56;BaseQRankSum=13.926;DP=900;FS=6.770;HRun=0;HaplotypeScore=163.8044;InbreedingCoeff=0.8853;MQ=59.52;MQ0=2;MQRankSum=-12.420;QD=13.49;ReadPosRankSum=-2.382;VQSLOD=2.6817;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,150,3420	0/0:13,0:13:39.13:0,39,891	0/0:41,0:33:99:0,99,2062	0/0:40,0:31:43.95:0,44,1645	0/0:43,0:43:99:0,123,2822	0/0:28,0:28:78.27:0,78,1767	0/0:44,0:44:99:0,129,2671	0/0:42,0:42:99:0,126,2798	0/0:42,0:42:99:0,123,2880	0/0:44,0:44:99:0,126,2956	0/0:27,0:27:81.28:0,81,1910	0/0:43,0:43:99:0,126,2900	0/0:35,0:35:99:0,105,2378	0/0:39,0:39:99:0,111,2552	1/1:19,11:28:48.87:409,49,0	0/1:18,5:20:26.48:298,0,26	0/0:29,0:29:81.28:0,81,1877	1/1:9,4:13:29.85:300,30,0	1/1:6,1:7:20.97:222,21,0	1/1:10,0:10:24.04:230,24,0	1/1:18,5:22:26.76:150,27,0	0/0:29,0:29:87.29:0,87,2013	0/0:24,0:24:69.24:0,69,1603	0/0:63,0:63:99:0,176,4099	0/0:19,0:19:57.15:0,57,1297	0/0:41,0:41:99:0,120,2721	0/0:33,0:33:96.33:0,96,2240	0/0:23,0:23:40.31:0,40,1365
chr10	15376569	.	T	TG	2138.63	PASS	AB=0.917;AC=13;AF=0.232;AN=56;BaseQRankSum=12.831;DP=905;FS=3.028;HRun=0;HaplotypeScore=130.0064;InbreedingCoeff=0.8944;MQ=60.35;MQ0=1;MQRankSum=-11.470;QD=16.20;ReadPosRankSum=0.195;VQSLOD=5.4700;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,150,2042	0/0:13,0:13:39.12:0,39,529	0/0:45,0:37:99:0,104,1343	0/0:40,1:34:44.23:0,44,966	0/0:41,0:41:99:0,123,1703	0/0:27,0:27:75.24:0,75,1032	0/0:43,0:43:99:0,126,1640	0/0:43,0:43:99:0,126,1717	0/0:42,0:42:99:0,126,1762	0/0:41,0:42:99:0,126,1753	0/0:27,0:27:81.27:0,81,1133	0/0:45,0:45:99:0,129,1772	0/0:35,0:35:99:0,102,1426	0/0:40,0:40:99:0,114,1575	1/1:12,19:29:48.16:658,48,0	1/1:7,17:21:3.18:537,3,0	0/0:28,0:28:84.27:0,84,1158	1/1:6,8:14:30.09:393,30,0	1/1:1,6:7:21.05:256,21,0	1/1:0,10:10:18.05:231,18,0	1/1:6,18:23:18.06:241,18,0	0/0:28,0:28:84.28:0,84,1175	0/0:24,0:24:69.22:0,69,948	0/0:63,1:64:99:0,178,2474	0/0:19,0:19:57.15:0,57,775	0/0:40,0:40:99:0,120,1660	0/0:34,0:34:99:0,99,1353	0/1:20,2:22:2.65:3,0,773
chr10	15376773	.	AT	A	2496.99	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=11.926;DP=531;FS=2.264;HRun=9;HaplotypeScore=57.0859;InbreedingCoeff=0.9743;MQ=69.05;MQ0=0;MQRankSum=-1.980;QD=20.81;ReadPosRankSum=0.208;VQSLOD=4.2566;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,120,1366	0/0:7,0:7:18.04:0,18,198	0/0:8,0:8:10.27:0,10,101	0/0:11,0:11:9.98:0,10,165	0/0:17,0:17:39.10:0,39,441	0/0:12,0:12:33.08:0,33,364	0/0:16,0:16:25.11:0,25,447	0/0:36,2:38:53.76:0,54,839	0/0:15,0:15:39.11:0,39,442	0/0:21,0:21:60.18:0,60,693	0/0:20,0:20:51.14:0,51,580	0/0:12,0:12:33.10:0,33,381	0/0:9,0:9:27.07:0,27,302	0/0:12,0:12:36.09:0,36,399	1/1:3,16:19:45.02:412,45,0	1/1:0,17:17:45.02:412,45,0	0/0:37,1:38:71.81:0,72,1070	1/1:4,17:21:13.40:377,13,0	1/1:1,16:17:48.02:439,48,0	1/1:2,21:23:60.03:549,60,0	1/1:5,18:23:54.01:494,54,0	0/0:20,0:20:48.10:0,48,539	0/0:11,0:11:33.10:0,33,381	0/0:27,0:27:69.19:0,69,785	0/0:15,0:15:39.12:0,39,450	0/0:24,0:24:60.18:0,60,693	0/0:12,0:12:33.10:0,33,381	0/0:23,0:23:69.21:0,69,796
chr10	15376831	.	C	CT	1021.49	PASS	AB=0.853;AC=13;AF=0.232;AN=56;BaseQRankSum=6.365;DP=465;FS=0.810;HRun=11;HaplotypeScore=58.2360;InbreedingCoeff=0.4715;MQ=61.10;MQ0=19;MQRankSum=-2.164;QD=5.84;ReadPosRankSum=-0.157;VQSLOD=1.3290;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,1:34:26.74:0,27,388	0/0:6,0:6:17.93:0,18,139	0/1:51,1:18:2.63:3,0,18	0/0:38,0:8:3.46:0,3,23	0/0:20,1:22:17.96:0,18,286	0/0:10,0:10:20.91:0,21,160	0/0:14,0:14:32.82:0,33,250	0/0:23,0:23:26.24:0,26,224	0/0:8,0:8:13.99:0,14,103	0/0:12,0:13:25.90:0,26,191	0/0:16,0:17:30.64:0,31,220	0/0:6,0:9:14.96:0,15,87	0/0:8,0:9:25.95:0,26,191	0/0:11,0:11:29.89:0,30,232	1/1:2,6:8:18.03:180,18,0	1/1:5,2:8:14.86:136,15,0	0/1:21,1:25:3.73:4,0,309	0/1:13,11:24:37.13:333,0,37	1/1:14,2:16:8.19:106,8,0	1/1:11,11:23:12.04:336,12,0	0/1:5,3:8:43.54:73,0,44	0/0:8,0:10:22.94:0,23,166	0/0:9,0:11:22:0,22,151	0/0:12,0:12:26.89:0,27,209	0/0:14,0:15:28.90:0,29,213	0/0:13,0:14:24.48:0,24,170	0/1:9,1:10:15.57:16,0,72	0/0:10,0:9:5.92:0,6,46
chr10	15376933	.	T	TA	582.17	PASS	AC=10;AF=0.208;AN=48;BaseQRankSum=2.476;DP=214;FS=2.261;HRun=2;HaplotypeScore=26.3094;InbreedingCoeff=0.6342;MQ=60.72;MQ0=14;MQRankSum=-1.107;QD=23.29;ReadPosRankSum=1.585;VQSLOD=3.4539;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:6:15.05:0,15,183	0/0:5,0:5:15.05:0,15,185	0/0:28,0:8:13.78:0,14,134	0/0:38,0:15:16.79:0,17,156	0/0:3,0:3:6.02:0,6,74	0/0:4,0:4:9.03:0,9,111	0/0:2,0:2:6.01:0,6,63	0/0:39,0:31:77.84:0,78,903	0/0:1,0:1:3.01:0,3,37	0/0:4,0:4:12.04:0,12,148	./.	0/0:4,0:4:9.03:0,9,111	0/0:2,0:2:5.38:0,5,45	0/0:1,0:1:3.01:0,3,37	1/1:0,1:1:3.01:42,3,0	./.	0/0:22,0:22:54.14:0,54,651	1/1:3,9:11:27.09:377,27,0	1/1:3,5:5:10.70:161,11,0	1/1:0,2:2:5.95:60,6,0	1/1:0,2:2:6.02:84,6,0	./.	0/0:1,0:1:3.01:0,3,37	./.	0/0:3,0:3:6.02:0,6,74	0/0:3,0:3:9.02:0,9,101	0/0:5,0:5:12.04:0,12,147	0/0:14,0:14:42.13:0,42,518
chr10	15379442	.	A	ACAC	4104.23	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=11.687;DP=385;FS=1.605;HRun=0;HaplotypeScore=73.3736;InbreedingCoeff=0.9434;MQ=63.86;MQ0=0;MQRankSum=-0.895;QD=58.63;ReadPosRankSum=1.258;VQSLOD=5.3128;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:60.66:0,61,1086	0/0:9,0:9:24.08:0,24,447	0/0:5,0:3:5.89:0,6,71	0/0:6,0:3:8.53:0,9,51	0/0:23,0:23:69.22:0,69,1255	0/0:15,0:15:45.15:0,45,831	0/0:5,0:5:15.05:0,15,280	0/0:29,0:29:87.28:0,87,1562	0/0:9,0:9:27.09:0,27,503	0/0:16,0:16:48.16:0,48,892	0/0:15,0:15:45.14:0,45,782	0/0:8,0:8:24.08:0,24,447	0/0:10,0:10:30.10:0,30,559	0/0:10,0:10:30.10:0,30,531	1/1:0,7:8:24.08:496,24,0	1/1:1,8:9:27.09:513,27,0	0/0:28,0:28:84.26:0,84,1521	1/1:1,17:18:54.19:1057,54,0	1/1:0,11:13:39.13:814,39,0	1/1:2,15:18:54.17:1026,54,0	1/1:2,2:4:12.03:199,12,0	0/0:3,0:3:9.03:0,9,168	0/0:16,0:16:48.14:0,48,835	0/0:14,0:14:42.14:0,42,783	0/0:20,0:20:60.15:0,60,996	0/0:24,0:24:69.22:0,69,1227	0/0:18,0:18:51.17:0,51,950	0/0:10,0:10:30.10:0,30,559
chr10	15379443	.	AT	A	1812.02	PASS	AB=1.000;AC=14;AF=0.250;AN=56;BaseQRankSum=12.856;DP=380;FS=2.244;HRun=1;HaplotypeScore=63.1751;InbreedingCoeff=0.8665;MQ=63.94;MQ0=0;MQRankSum=-1.655;QD=22.65;ReadPosRankSum=0.901;VQSLOD=3.7608;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:60.18:0,60,895	0/0:9,0:9:27.08:0,27,391	0/1:5,0:3:0.18:0,0,41	0/1:6,0:3:4.22:5,0,4	0/0:23,0:23:69.22:0,69,1031	0/0:15,0:15:45.14:0,45,666	0/0:5,0:5:15.05:0,15,229	0/0:28,0:28:84.27:0,84,1265	0/0:9,0:9:27.09:0,27,413	0/0:16,0:16:48.16:0,48,734	0/0:16,0:16:45.12:0,45,647	0/0:9,0:9:27.06:0,27,369	0/0:10,0:10:30.10:0,30,459	0/0:10,0:10:30.09:0,30,438	1/1:2,7:9:27.06:280,27,0	1/1:1,8:9:26.92:246,27,0	0/0:27,0:27:81.27:0,81,1234	1/1:1,17:18:51.44:502,51,0	1/1:2,11:13:38.27:397,38,0	1/1:2,15:17:48.86:481,49,0	1/1:1,2:3:9:84,9,0	0/0:3,0:3:9.03:0,9,138	0/0:15,0:15:45.14:0,45,663	0/0:14,0:14:42.14:0,42,643	0/0:20,0:20:60.15:0,60,834	0/0:23,0:23:69.22:0,69,1018	0/0:18,0:18:54.15:0,54,776	0/0:10,0:10:30.10:0,30,447
chr10	15381039	.	ATGTG	A	10301.27	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=15.738;DP=700;FS=0.313;HRun=0;HaplotypeScore=119.1982;InbreedingCoeff=0.9994;MQ=83.88;MQ0=1;MQRankSum=-7.017;QD=47.69;ReadPosRankSum=1.550;VQSLOD=5.6983;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:87.28:0,87,2236	1/1:0,20:20:51.17:994,51,0	0/0:26,0:26:72.24:0,72,1793	0/0:26,0:27:71.34:0,71,1792	0/0:25,0:25:75.24:0,75,1986	0/0:27,0:27:78.22:0,78,2024	0/0:29,0:29:87.28:0,87,2312	1/1:2,30:32:87.67:1465,88,0	1/1:0,30:30:69.24:1377,69,0	1/1:0,24:24:72.18:1347,72,0	1/1:0,19:19:48.16:931,48,0	0/0:23,0:23:69.20:0,69,1810	0/0:25,0:25:75.22:0,75,1925	0/0:26,0:26:75.26:0,75,2087	0/0:32,0:32:93.30:0,93,2481	0/0:26,0:26:78.25:0,78,2123	1/1:1,29:29:57.20:1114,57,0	0/0:15,0:15:45.15:0,45,1132	0/0:15,0:15:45.12:0,45,1134	0/0:20,0:20:60.19:0,60,1598	0/0:37,0:37:99:0,111,3008	0/0:23,0:23:69.22:0,69,1851	0/0:21,0:21:63.22:0,63,1748	0/0:38,0:38:99:0,102,2675	0/0:19,0:19:57.18:0,57,1535	1/1:0,23:23:66.20:1225,66,0	1/1:0,27:27:72.25:1436,72,0	1/1:2,9:11:21.07:412,21,0
chr10	15383111	.	T	TTTC	4997.57	PASS	AB=1.000;AC=31;AF=0.554;AN=56;BaseQRankSum=-0.162;DP=499;FS=0.447;HRun=0;HaplotypeScore=85.4123;InbreedingCoeff=0.9023;MQ=74.68;MQ0=3;MQRankSum=-1.167;QD=15.67;ReadPosRankSum=1.966;VQSLOD=4.5754;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:35.07:0,35,394	1/1:10,0:10:17.74:146,18,0	0/0:23,0:10:10.72:0,11,136	0/0:15,0:11:14.36:0,14,81	0/1:19,0:18:15.41:15,0,69	0/0:15,0:14:24.28:0,24,176	0/0:13,0:13:16.79:0,17,131	1/1:32,0:32:65.54:549,66,0	1/1:15,1:16:31.88:285,32,0	1/1:18,1:18:36.66:471,37,0	1/1:18,1:19:20.61:364,21,0	0/0:17,0:17:27.31:0,27,339	0/0:19,0:19:29.95:0,30,280	0/0:14,0:14:26.52:0,27,244	1/1:20,0:19:19.57:192,20,0	1/1:33,0:33:50.73:458,51,0	1/1:24,2:26:30.54:346,31,0	1/1:21,0:20:34.37:273,34,0	1/1:25,0:25:60.06:684,60,0	1/1:11,0:11:18.04:223,18,0	1/1:17,0:17:13.55:191,14,0	0/0:6,0:6:12.03:0,12,163	0/0:12,0:12:18:0,18,194	0/0:13,0:13:30.05:0,30,369	0/0:13,0:13:30.05:0,30,413	1/1:20,0:19:47.91:491,48,0	1/1:22,0:21:14.68:146,15,0	1/1:7,0:7:15.02:165,15,0
chr10	15383114	.	C	CT	1751.92	PASS	AB=0.928;AC=41;AF=0.732;AN=56;BaseQRankSum=6.587;DP=514;FS=24.196;HRun=17;HaplotypeScore=83.7428;InbreedingCoeff=0.4754;MQ=70.06;MQ0=4;MQRankSum=0.448;QD=3.74;ReadPosRankSum=1.425;VQSLOD=-0.6349;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:17,1:20:31.60:32,0,46	1/1:11,0:11:10.91:48,11,0	0/1:21,0:7:3.95:6,0,4	0/1:13,0:9:0:0,0,0	1/1:6,13:20:8.46:153,8,0	1/1:7,10:16:17.23:112,17,0	0/1:8,8:17:0.74:47,0,1	1/1:33,0:34:23.83:106,24,0	1/1:21,0:21:33.73:147,34,0	1/1:19,0:18:24.35:138,24,0	1/1:20,0:20:25.62:115,26,0	0/1:15,1:17:23.65:24,0,45	0/1:15,1:18:8.38:8,0,31	0/1:13,0:13:1.52:2,0,14	1/1:22,0:20:21.88:96,22,0	1/1:33,0:33:41.93:180,42,0	1/1:27,0:27:35.28:163,35,0	1/1:22,0:22:29.39:149,29,0	1/1:24,0:24:26.25:96,26,0	1/1:10,0:10:11.86:46,12,0	1/1:16,0:16:13.49:48,13,0	0/0:5,0:6:7.69:0,8,34	0/0:13,0:13:5.66:0,6,53	0/0:11,0:13:18.31:0,18,88	0/0:12,0:14:24:0,24,119	1/1:19,0:18:14.69:95,15,0	1/1:23,0:22:13.31:54,13,0	1/1:7,0:7:13.21:53,13,0
chr10	15383115	.	T	TTC	6175.17	PASS	AB=0.645;AC=27;AF=0.482;AN=56;BaseQRankSum=-4.486;DP=526;FS=10.178;HRun=0;HaplotypeScore=86.5407;InbreedingCoeff=0.7049;MQ=68.65;MQ0=4;MQRankSum=-0.368;QD=17.59;ReadPosRankSum=4.618;VQSLOD=4.1690;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:45.29:0,45,429	0/1:1,10:11:0.50:175,0,1	0/0:21,0:7:11.16:0,11,143	0/0:12,0:8:14.52:0,15,85	0/1:21,0:20:21.68:22,0,103	0/0:17,0:16:23.36:0,23,148	0/0:17,0:17:15.30:0,15,144	1/1:9,24:34:36.65:682,37,0	1/1:8,13:21:27.28:447,27,0	1/1:10,13:21:43.89:614,44,0	0/1:5,16:21:20.36:377,0,20	0/0:18,0:18:35.74:0,36,379	0/0:16,0:16:39.37:0,39,326	0/0:12,0:12:25.63:0,26,260	0/1:5,16:20:2.55:296,0,3	1/1:4,30:35:34.91:725,35,0	1/1:15,13:29:20.57:411,21,0	1/1:19,7:25:43.27:489,43,0	1/1:24,0:23:69:635,69,0	1/1:10,0:10:17.78:163,18,0	1/1:13,1:15:21.87:211,22,0	0/0:6,0:6:12.03:0,12,149	0/0:11,0:11:7.61:0,8,215	0/0:12,0:12:33.03:0,33,380	0/0:14,0:14:33.04:0,33,404	1/1:6,15:21:26.78:525,27,0	0/1:7,19:27:0.99:194,0,1	1/1:2,6:8:14.95:207,15,0
chr10	15383116	.	T	TCTTC	2356.22	PASS	AB=0.948;AC=18;AF=0.321;AN=56;BaseQRankSum=-2.166;DP=529;FS=34.741;HRun=0;HaplotypeScore=116.8346;InbreedingCoeff=0.1995;MQ=66.76;MQ0=4;MQRankSum=-2.010;QD=7.96;ReadPosRankSum=1.579;VQSLOD=0.9420;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:51.08:0,51,754	0/1:10,0:10:1.62:2,0,26	0/0:22,0:8:16.79:0,17,202	0/0:11,0:6:13.73:0,14,105	0/0:22,0:21:40.20:0,40,406	0/0:16,0:16:22.01:0,22,343	0/0:15,0:15:26.92:0,27,364	0/1:29,0:29:51.20:51,0,89	0/1:19,0:21:45.94:46,0,84	0/1:26,0:23:57.35:84,0,57	0/1:20,0:20:59.61:134,0,60	0/0:20,0:20:49.14:0,49,617	0/0:15,0:15:42.03:0,42,597	0/0:12,0:12:32.61:0,33,491	0/1:21,0:20:4.87:5,0,36	0/0:32,0:33:18.35:0,18,77	0/1:25,0:29:4.36:4,0,115	0/1:18,0:25:61.60:62,0,109	1/1:7,14:26:69.02:1286,69,0	1/1:3,5:11:17.73:379,18,0	1/1:4,8:15:21.79:409,22,0	0/0:6,0:6:12.04:0,12,230	0/0:14,0:14:23.43:0,23,349	0/0:13,0:13:33.08:0,33,584	0/0:13,0:13:36.10:0,36,631	1/1:21,0:21:0.08:50,0,0	0/1:27,0:27:1.70:2,0,18	0/1:10,0:10:10.41:10,0,17
chr10	15385287	.	A	AG	2970.12	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.429;DP=663;FS=1.470;HRun=3;HaplotypeScore=70.0638;InbreedingCoeff=0.9874;MQ=88.22;MQ0=0;MQRankSum=-1.823;QD=36.22;ReadPosRankSum=-1.563;VQSLOD=3.6320;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,126,1500	0/0:4,0:4:12.04:0,12,143	0/0:25,0:25:60.41:0,60,705	0/0:23,0:23:47.01:0,47,581	0/0:13,0:13:39.12:0,39,468	0/0:27,0:27:78.24:0,78,936	0/0:31,0:31:90.28:0,90,1080	0/0:28,0:28:75.23:0,75,900	0/0:27,0:27:81.23:0,81,959	0/0:18,0:18:51.16:0,51,610	0/0:11,0:11:33.10:0,33,389	0/0:34,0:34:90.26:0,90,1069	0/0:21,0:21:60.17:0,60,708	0/0:19,0:19:54.16:0,54,648	0/0:39,0:39:99:0,117,1404	0/0:24,0:24:69.20:0,69,817	0/0:34,0:34:96.27:0,96,1138	0/0:17,0:17:51.16:0,51,611	1/1:2,27:29:81.24:1097,81,0	1/1:0,13:13:36.12:504,36,0	1/1:3,37:40:99:1512,108,0	0/0:14,0:14:42.10:0,42,481	0/0:8,0:8:21.06:0,21,250	0/0:36,0:36:99:0,102,1211	0/0:12,0:12:33.08:0,33,383	0/0:23,0:23:66.19:0,66,779	0/0:23,0:23:69.21:0,69,828	0/0:23,0:23:69.21:0,69,828
chr10	15387408	.	GA	G	2289.46	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=7.535;DP=668;FS=4.620;HRun=1;HaplotypeScore=66.8487;InbreedingCoeff=0.9988;MQ=96.09;MQ0=0;MQRankSum=-0.507;QD=34.17;ReadPosRankSum=0.004;VQSLOD=3.2741;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,129,2017	0/0:8,0:8:24.08:0,24,375	0/0:37,0:37:99:0,108,1517	0/0:26,0:26:77.57:0,78,1081	0/0:20,0:20:60.18:0,60,881	0/0:24,0:24:72.25:0,72,1123	0/0:29,0:29:87.28:0,87,1332	0/0:28,0:28:84.22:0,84,1245	0/0:19,0:19:57.18:0,57,865	0/0:23,0:23:63.21:0,63,967	0/0:9,0:9:27.09:0,27,422	0/0:20,0:20:60.18:0,60,892	0/0:26,0:26:78.25:0,78,1189	0/0:23,0:23:69.23:0,69,1079	0/0:28,0:28:81.28:0,81,1263	0/0:19,0:19:57.18:0,57,870	0/0:35,0:35:99:0,105,1612	0/0:20,0:20:60.20:0,60,934	1/1:0,13:13:39.11:527,39,0	1/1:0,21:21:60.07:757,60,0	1/1:0,33:33:84.21:1149,84,0	0/0:19,0:19:54.15:0,54,780	0/0:24,0:24:69.16:0,69,1008	0/0:38,0:37:99:0,111,1677	0/0:17,0:17:51.14:0,51,733	0/0:24,0:24:72.24:0,72,1106	0/0:30,0:30:90.29:0,90,1383	0/0:12,0:12:33.11:0,33,516
chr10	15388321	.	C	CT	10873.12	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-15.718;DP=717;FS=10.474;HRun=1;HaplotypeScore=66.1739;InbreedingCoeff=0.9978;MQ=89.75;MQ0=0;MQRankSum=-7.681;QD=38.56;ReadPosRankSum=1.130;VQSLOD=4.9238;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,150,1896	1/1:0,7:7:15.05:225,15,0	0/0:28,0:28:58.55:0,59,813	0/0:25,0:25:57.65:0,58,714	1/1:0,18:18:54.18:809,54,0	1/1:1,19:20:51.17:763,51,0	1/1:1,29:30:75.25:1124,75,0	1/1:1,31:32:90.27:1306,90,0	1/1:1,20:21:48.16:719,48,0	1/1:1,35:36:99:1570,105,0	1/1:1,21:22:57.19:854,57,0	0/0:27,0:27:78.25:0,78,998	0/0:30,0:30:90.23:0,90,1133	0/0:25,0:25:72.22:0,72,920	0/0:24,0:24:69.21:0,69,881	0/0:24,0:24:69.21:0,69,880	1/1:2,34:36:81.27:1213,81,0	0/0:23,0:23:66.18:0,66,837	0/0:18,0:18:48.14:0,48,605	0/0:18,0:18:54.18:0,54,701	0/0:46,0:46:99:0,138,1757	0/0:19,0:19:54.17:0,54,686	0/0:20,0:20:60.18:0,60,762	0/0:37,0:37:99:0,102,1289	0/0:16,0:16:48.14:0,48,608	1/1:2,21:23:63.21:942,63,0	1/1:1,17:18:51.17:764,51,0	1/1:0,19:19:39.13:584,39,0
chr10	15389199	.	AGTGGCCGGAGTAGCAGGGTAGACG	A	7721.07	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=10.621;DP=603;FS=7.076;HRun=0;HaplotypeScore=360.2141;InbreedingCoeff=0.9643;MQ=86.08;MQ0=0;MQRankSum=-10.163;QD=66.56;ReadPosRankSum=4.173;VQSLOD=2.9711;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:96.24:0,96,6458	0/0:11,0:11:33.11:0,33,2827	0/0:19,0:19:42.14:0,42,3021	0/0:24,0:24:60.12:0,60,3455	0/0:8,0:8:24.04:0,24,1287	0/0:19,0:19:48.16:0,48,3585	0/0:40,0:40:99:0,114,10405	0/0:27,0:27:75.21:0,75,5955	0/0:30,0:30:90.31:0,90,9072	0/0:22,0:22:45.05:0,45,2507	0/0:13,0:13:30.07:0,30,1435	0/0:31,0:31:81.28:0,81,7603	0/0:25,0:25:69.24:0,69,6689	0/0:26,0:26:75.26:0,75,7265	1/1:9,17:26:42.14:2602,42,0	1/1:11,12:23:27.09:1749,27,0	0/0:47,0:47:99:0,135,13977	1/1:12,10:22:27.09:1670,27,0	1/1:6,4:10:12.04:631,12,0	1/1:1,5:6:9.03:583,9,0	1/1:23,6:29:7.60:486,8,0	0/0:17,0:17:48.13:0,48,2044	0/0:12,0:12:33.07:0,33,1995	0/0:20,0:20:57.20:0,57,5983	0/0:18,0:18:48.16:0,48,2924	0/0:15,0:15:42.10:0,42,3082	0/0:17,0:17:51.18:0,51,4983	0/0:12,0:12:27.09:0,27,2029
chr10	15394131	.	CT	C	6138.28	PASS	AB=0.780;AC=31;AF=0.554;AN=56;BaseQRankSum=9.888;DP=593;FS=1.491;HRun=11;HaplotypeScore=65.0453;InbreedingCoeff=0.6717;MQ=74.17;MQ0=0;MQRankSum=0.071;QD=16.50;ReadPosRankSum=-1.423;VQSLOD=5.1319;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:26.30:0,26,664	1/1:1,8:9:20.96:172,21,0	0/1:14,1:15:13.68:14,0,122	0/1:9,1:9:15.89:16,0,36	1/1:2,20:22:53.91:443,54,0	1/1:3,20:23:59.93:493,60,0	1/1:3,17:20:18.95:362,19,0	1/1:6,25:32:73.91:591,74,0	1/1:2,15:17:38.95:320,39,0	1/1:10,31:41:92.85:763,93,0	1/1:2,6:8:17.98:148,18,0	0/1:16,2:18:4.44:4,0,351	0/0:18,0:19:47.93:0,48,483	0/0:24,0:24:57.12:0,57,597	0/0:22,0:22:57.12:0,57,594	0/0:18,0:18:45.10:0,45,472	1/1:2,17:19:50.93:419,51,0	0/0:18,0:19:47.95:0,48,494	0/1:7,17:24:6.51:358,0,7	1/1:3,28:31:83.89:689,84,0	0/1:6,18:25:31.01:384,0,31	0/0:22,0:24:53.80:0,54,540	0/0:23,0:25:65.84:0,66,642	0/0:23,0:24:66:0,66,686	0/0:19,1:20:17.44:0,17,376	1/1:10,15:26:46.92:371,47,0	1/1:5,19:24:50.89:418,51,0	1/1:1,7:8:20.97:172,21,0
chr10	15394982	.	A	AGAG	17129.45	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-14.740;DP=689;FS=2.572;HRun=0;HaplotypeScore=87.9089;InbreedingCoeff=0.9996;MQ=86.50;MQ0=0;MQRankSum=-3.679;QD=49.36;ReadPosRankSum=0.804;VQSLOD=6.5137;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,117,1801	1/1:1,13:14:36.12:764,36,0	0/0:24,0:25:66.09:0,66,941	0/0:27,0:27:69.23:0,69,1085	1/1:1,24:25:57.15:1171,57,0	1/1:2,22:25:51.17:1109,51,0	1/1:3,32:35:90.31:1978,90,0	1/1:4,26:32:84.22:1663,84,0	1/1:1,20:24:45.15:1003,45,0	1/1:4,23:28:66.23:1442,66,0	1/1:1,10:12:24.08:535,24,0	0/0:37,0:37:99:0,108,1637	0/0:23,0:23:69.22:0,69,1096	0/0:17,0:17:48.11:0,48,708	0/0:25,0:25:72.22:0,72,1123	0/0:34,0:34:99:0,102,1663	1/1:3,14:18:30.10:668,30,0	0/0:24,0:24:60.18:0,60,954	1/1:5,15:20:48.14:918,48,0	1/1:0,16:18:42.10:819,42,0	1/1:1,25:26:60.21:1338,60,0	0/0:21,0:21:63.22:0,63,1028	0/0:13,0:13:33.10:0,33,514	0/0:25,0:25:72.25:0,72,1156	0/0:28,0:28:81.26:0,81,1288	1/1:1,22:23:65.55:1278,66,0	1/1:2,26:28:66.23:1439,66,0	1/1:2,16:18:45.15:1003,45,0
chr10	15395825	.	TA	T	4150.69	PASS	AB=0.923;AC=25;AF=0.446;AN=56;BaseQRankSum=9.184;DP=532;FS=11.541;HRun=11;HaplotypeScore=73.3300;InbreedingCoeff=0.9418;MQ=61.34;MQ0=2;MQRankSum=-1.257;QD=16.80;ReadPosRankSum=-0.945;VQSLOD=3.4574;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,2:38:36.91:0,37,815	1/1:2,9:11:20.97:172,21,0	0/1:11,1:10:3.99:4,0,144	0/0:15,0:7:18.02:0,18,173	0/0:7,0:27:66.75:0,67,443	0/0:2,0:12:25.87:0,26,148	0/0:2,0:14:25.67:0,26,129	1/1:6,26:33:76.92:621,77,0	1/1:1,7:9:23.01:178,23,0	1/1:5,20:25:59.87:488,60,0	1/1:2,15:17:44.89:363,45,0	0/0:20,0:20:45.10:0,45,469	0/0:10,0:10:30.06:0,30,313	0/0:19,1:20:26.48:0,26,481	0/0:26,0:26:63.16:0,63,671	0/0:22,1:23:35.51:0,36,583	1/1:5,20:26:47.93:394,48,0	0/0:26,2:28:22.79:0,23,627	1/1:9,17:25:33.37:427,33,0	1/1:3,9:13:28.99:227,29,0	1/1:3,11:14:20.97:172,21,0	0/0:8,0:8:15.02:0,15,152	0/0:10,0:10:23.08:0,23,224	0/0:15,0:15:36.08:0,36,378	0/0:19,0:19:51.13:0,51,544	1/1:4,20:24:59.90:489,60,0	1/1:3,18:21:41.94:345,42,0	1/1:4,12:16:32.92:271,33,0
chr10	15396844	.	TCAGCCAGAAG	T	5140.66	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=10.907;DP=636;FS=1.775;HRun=0;HaplotypeScore=205.7839;InbreedingCoeff=0.9934;MQ=81.41;MQ0=0;MQRankSum=-11.798;QD=75.60;ReadPosRankSum=2.301;VQSLOD=4.5234;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,117,5954	0/0:12,0:12:30.10:0,30,1488	0/0:19,0:19:51.18:0,51,2398	0/0:21,0:21:54.19:0,54,2137	1/1:3,13:16:27.09:872,27,0	1/1:2,22:24:60.21:1941,60,0	1/1:3,25:28:72.25:2328,72,0	0/0:24,0:24:66.22:0,66,3185	0/0:25,0:25:71.46:0,71,3547	0/0:21,0:21:57.20:0,57,2812	0/0:5,0:5:15.05:0,15,772	0/0:16,0:16:48.16:0,48,2461	0/0:17,0:17:48.16:0,48,2343	0/0:16,0:16:42.13:0,42,1923	0/0:28,0:28:81.28:0,81,4102	0/0:25,0:25:75.26:0,75,3787	0/0:42,0:41:99:0,123,6378	0/0:28,0:28:81.28:0,81,4084	0/0:25,0:25:60.18:0,60,2605	0/0:18,0:18:48.16:0,48,2490	0/0:56,0:56:99:0,153,7199	0/0:14,0:14:39.13:0,39,1866	0/0:17,0:17:51.17:0,51,2498	0/0:27,0:27:75.26:0,75,3723	0/0:14,0:14:42.14:0,42,2149	0/0:27,0:27:69.24:0,69,3444	0/0:21,0:21:54.18:0,54,2573	0/0:9,0:9:27.09:0,27,1414
chr10	15397524	.	TG	T	11506.59	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=10.850;DP=715;FS=4.078;HRun=1;HaplotypeScore=75.3919;InbreedingCoeff=0.9994;MQ=81.14;MQ0=0;MQRankSum=-1.676;QD=37.73;ReadPosRankSum=2.797;VQSLOD=5.6414;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,126,1989	1/1:0,9:9:21.02:289,21,0	0/0:16,0:16:48.16:0,48,761	0/0:20,0:20:57.05:0,57,796	0/0:22,0:22:66.23:0,66,1055	0/0:24,0:24:66.23:0,66,1055	0/0:43,0:43:99:0,129,2037	1/1:0,22:22:66.19:887,66,0	1/1:0,29:29:72.24:1006,72,0	1/1:1,36:37:99:1446,105,0	1/1:0,20:20:57.19:797,57,0	0/0:19,0:19:54.17:0,54,833	0/0:25,0:25:72.25:0,72,1148	0/0:31,0:31:93.29:0,93,1431	0/0:20,0:20:60.18:0,60,926	0/0:26,0:26:78.27:0,78,1245	1/1:0,31:31:90.26:1231,90,0	0/0:21,0:21:60.18:0,60,933	1/1:0,15:15:42.11:567,42,0	1/1:0,22:22:66.22:923,66,0	1/1:0,50:50:99:1720,123,0	0/0:24,0:24:72.25:0,72,1151	0/0:20,0:20:57.19:0,57,908	0/0:30,0:30:90.31:0,90,1438	0/0:27,0:27:78.27:0,78,1245	1/1:0,27:27:72.24:1003,72,0	1/1:0,31:31:84.28:1175,84,0	1/1:0,12:12:33.11:462,33,0
chr10	15398172	.	TGTTAA	T	3090.87	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=10.723;DP=735;FS=8.087;HRun=0;HaplotypeScore=131.9422;InbreedingCoeff=0.9996;MQ=83.54;MQ0=0;MQRankSum=-5.422;QD=42.93;ReadPosRankSum=-0.036;VQSLOD=3.5409;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:90.30:0,90,2692	0/0:11,0:11:27.09:0,27,801	0/0:25,0:24:62.24:0,62,1710	0/0:22,0:22:60.21:0,60,1664	1/1:9,22:31:63.22:1281,63,0	1/1:0,17:17:48.16:983,48,0	1/1:4,20:24:48.16:970,48,0	0/0:33,0:32:93.30:0,93,2639	0/0:16,0:15:42.14:0,42,1247	0/0:17,0:17:48.16:0,48,1476	0/0:24,0:24:66.23:0,66,2028	0/0:25,0:25:72.20:0,72,2091	0/0:23,0:23:63.22:0,63,1855	0/0:28,0:28:75.26:0,75,2287	0/0:38,0:38:99:0,108,3212	0/0:34,0:34:96.33:0,96,2869	0/0:38,0:38:99:0,108,3318	0/0:22,0:22:54.18:0,54,1568	0/0:25,0:25:57.19:0,57,1695	0/0:31,0:31:84.27:0,84,2515	0/0:19,0:19:48.16:0,48,1379	0/0:26,0:26:69.24:0,69,2112	0/0:16,0:16:45.15:0,45,1347	0/0:26,0:26:78.27:0,78,2340	0/0:32,0:32:90.31:0,90,2660	0/0:42,0:42:99:0,123,3703	0/0:33,0:33:99:0,99,2894	0/0:25,0:25:72.25:0,72,2162
chr10	15398890	.	C	CAA	3770.51	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-10.875;DP=709;FS=0.961;HRun=1;HaplotypeScore=94.4239;InbreedingCoeff=0.9941;MQ=69.92;MQ0=5;MQRankSum=0.761;QD=40.98;ReadPosRankSum=1.663;VQSLOD=3.9074;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:96.68:0,97,1726	0/0:5,0:5:15.05:0,15,228	0/0:32,0:23:66.16:0,66,872	0/0:53,0:48:99:0,122,1641	0/0:17,0:16:39.07:0,39,508	0/0:18,0:18:54.15:0,54,779	0/0:39,0:39:99:0,102,1355	0/0:19,0:19:51.06:0,51,615	0/0:24,0:24:66.16:0,66,956	0/0:36,0:36:99:0,106,1446	0/0:16,0:16:41.68:0,42,573	0/0:20,0:20:57.14:0,57,842	0/0:21,0:20:54.12:0,54,738	0/0:17,0:17:51.09:0,51,669	0/0:31,0:31:87.23:0,87,1218	0/0:23,0:23:57.15:0,57,804	0/0:36,0:36:99:0,108,1582	0/0:28,0:27:81.15:0,81,1132	1/1:3,17:20:50.93:798,51,0	1/1:1,18:19:42:658,42,0	1/1:1,51:52:99:2315,120,0	0/0:15,0:15:30.49:0,30,351	0/0:26,0:26:75.08:0,75,981	0/0:23,0:23:68.81:0,69,896	0/0:21,0:21:57.18:0,57,850	0/0:23,0:23:60.19:0,60,872	0/0:20,0:19:58.34:0,58,800	0/0:12,0:12:36.09:0,36,504
chr10	15399812	.	G	GT	1063.09	PASS	AB=0.896;AC=19;AF=0.339;AN=56;BaseQRankSum=2.061;DP=663;FS=2.756;HRun=14;HaplotypeScore=100.7907;InbreedingCoeff=0.1947;MQ=73.11;MQ0=3;MQRankSum=1.157;QD=3.09;ReadPosRankSum=-3.461;VQSLOD=0.1313;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:34,2:37:14.09:14,0,282	0/0:9,0:9:12.21:0,12,78	0/1:27,0:12:2.02:2,0,13	0/0:33,0:23:8.16:0,8,55	0/1:12,5:24:31.17:150,0,31	1/1:4,21:27:9.10:299,9,0	1/1:7,8:17:17.68:134,18,0	0/0:24,0:25:3.66:0,4,132	0/1:14,1:16:6.92:7,0,79	0/1:26,2:30:56.70:57,0,120	0/1:14,1:15:24.18:24,0,46	0/0:16,1:19:5.71:0,6,124	0/0:13,0:13:0.03:0,0,81	0/0:21,0:21:7.16:0,7,104	0/0:23,0:23:19.01:0,19,229	0/0:19,0:20:17.25:0,17,184	0/1:36,2:40:1.14:1,0,269	0/0:40,1:41:52.37:0,52,472	1/1:22,4:26:2.66:219,3,0	1/1:8,12:21:34.26:245,34,0	1/1:6,14:20:8.74:65,9,0	0/1:23,5:29:8.13:8,0,179	0/0:18,0:18:28.65:0,29,197	0/0:24,0:25:6.63:0,7,211	0/0:18,0:18:4.50:0,5,147	0/0:27,2:32:8.65:0,9,259	0/0:18,1:22:8.37:0,8,96	0/1:10,3:14:1.92:2,0,107
chr10	15402391	.	C	CG	1240.45	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=3.161;DP=278;FS=26.520;HRun=0;HaplotypeScore=44.5836;InbreedingCoeff=0.6952;MQ=74.51;MQ0=0;MQRankSum=0.147;QD=22.97;ReadPosRankSum=7.326;VQSLOD=2.0520;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:30.46:0,30,257	0/0:2,0:2:3:0,3,25	0/0:17,0:14:34.72:0,35,305	0/0:13,0:11:29.34:0,29,247	1/1:0,8:8:19.12:180,19,0	1/1:1,22:23:28.56:468,29,0	1/1:0,23:23:57.18:732,57,0	0/0:10,0:10:21.01:0,21,188	0/0:3,0:3:3:0,3,27	0/0:5,0:5:8.91:0,9,74	0/0:3,0:3:6:0,6,53	0/0:8,0:8:11.98:0,12,112	0/0:4,0:4:5.78:0,6,44	0/0:5,0:5:9:0,9,78	0/0:5,0:5:11.99:0,12,102	0/0:7,0:7:11.95:0,12,108	0/0:22,0:22:50.32:0,50,442	0/0:17,0:17:44.89:0,45,391	0/0:13,0:13:35.85:0,36,286	0/0:4,0:4:6:0,6,51	0/0:16,0:16:32.89:0,33,266	0/0:7,0:7:12:0,12,120	0/0:5,0:5:9:0,9,77	0/0:15,0:15:30.10:0,30,255	0/0:5,0:5:9:0,9,79	0/0:10,0:10:15.90:0,16,143	0/0:8,0:8:21.81:0,22,190	0/0:5,0:5:10.21:0,10,74
chr10	15404011	.	A	AGG	463.32	PASS	AB=0.605;AC=5;AF=0.089;AN=56;BaseQRankSum=1.385;DP=474;FS=6.478;HRun=9;HaplotypeScore=80.7920;InbreedingCoeff=0.6746;MQ=76.22;MQ0=0;MQRankSum=-0.791;QD=10.53;ReadPosRankSum=-2.459;VQSLOD=0.6412;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:51.08:0,51,531	0/0:6,0:6:12.03:0,12,128	0/0:15,0:14:5.63:0,6,208	0/0:11,0:12:23.97:0,24,229	0/0:16,0:16:33:0,33,335	0/0:16,0:16:45.08:0,45,467	0/0:30,0:30:75.12:0,75,788	0/0:12,0:12:11.71:0,12,126	0/0:12,0:12:6.40:0,6,243	0/0:20,0:20:48.08:0,48,502	0/0:7,0:7:8.94:0,9,84	0/0:18,0:19:8.44:0,8,337	0/0:12,0:12:20.98:0,21,222	0/0:22,0:22:57.12:0,57,596	0/0:30,0:31:56.75:0,57,586	0/0:24,0:24:66.13:0,66,686	0/0:40,0:41:69.08:0,69,869	0/0:16,0:16:45.09:0,45,468	1/1:5,5:11:15.49:199,15,0	1/1:2,3:7:11.89:111,12,0	0/1:9,13:26:3.61:275,0,4	0/0:14,0:14:27.04:0,27,284	0/0:4,0:4:12.03:0,12,127	0/0:32,0:32:55.24:0,55,776	0/0:6,0:6:11.97:0,12,118	0/0:15,0:15:30.03:0,30,313	0/0:10,0:12:11.83:0,12,209	0/0:11,0:11:11.96:0,12,128
chr10	15404316	.	G	GA	1346.87	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-7.463;DP=657;FS=0.000;HRun=9;HaplotypeScore=62.8234;InbreedingCoeff=0.9980;MQ=64.21;MQ0=12;MQRankSum=0.715;QD=24.05;ReadPosRankSum=0.829;VQSLOD=4.3816;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,118,1171	0/0:14,0:14:38.82:0,39,326	0/0:31,0:17:32.53:0,33,308	0/0:22,0:10:21.44:0,21,182	0/0:25,0:26:59.01:0,59,501	0/0:28,0:29:83.02:0,83,709	0/0:26,0:24:56.96:0,57,490	0/0:23,0:23:65.96:0,66,565	0/0:24,0:24:71.99:0,72,625	0/0:17,0:17:44.89:0,45,381	0/0:13,0:13:38.92:0,39,330	0/0:25,0:25:62.97:0,63,545	0/0:12,0:12:26.98:0,27,234	0/0:25,0:25:71.98:0,72,625	0/0:29,0:29:80.98:0,81,703	0/0:34,0:34:95.95:0,96,830	0/0:28,0:28:68.92:0,69,592	0/0:24,0:24:47.95:0,48,410	1/1:6,17:22:51.14:563,51,0	1/1:0,12:12:33.09:362,33,0	1/1:2,19:21:51.14:564,51,0	0/0:16,0:16:35.97:0,36,308	0/0:18,0:18:53.99:0,54,469	0/0:28,0:28:74.98:0,75,650	0/0:20,0:20:50.99:0,51,443	0/0:26,0:26:65.96:0,66,570	0/0:21,0:21:44.97:0,45,390	0/0:20,0:20:44.95:0,45,390
chr10	15405143	.	C	CA	593.66	PASS	AB=0.864;AC=7;AF=0.130;AN=54;BaseQRankSum=4.637;DP=552;FS=0.000;HRun=9;HaplotypeScore=76.7381;InbreedingCoeff=0.7316;MQ=54.25;MQ0=15;MQRankSum=-6.099;QD=9.28;ReadPosRankSum=-1.729;VQSLOD=1.9362;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:92.69:0,93,801	0/0:10,0:9:17.96:0,18,150	0/0:11,0:3:1.17:0,1,19	./.	0/0:21,0:21:56.98:0,57,495	0/0:22,0:22:38.92:0,39,327	0/0:19,0:19:23.98:0,24,205	0/0:30,1:30:51.32:0,51,587	0/0:15,0:15:44.97:0,45,386	0/0:22,1:24:25.80:0,26,436	0/0:21,0:22:52.92:0,53,448	0/0:20,0:20:56.97:0,57,491	0/0:18,0:18:47.99:0,48,416	0/0:15,0:15:35.98:0,36,312	0/0:29,0:28:62.96:0,63,547	0/0:24,0:23:59.98:0,60,521	0/0:32,0:31:68.97:0,69,598	0/0:29,0:26:56.97:0,57,495	1/1:5,15:20:19.03:425,19,0	1/1:2,9:11:18.05:198,18,0	1/1:6,8:12:6.02:66,6,0	0/0:21,0:21:50.99:0,51,443	0/0:19,0:19:44.09:0,44,382	0/0:19,0:19:44.98:0,45,388	0/1:16,3:19:42.49:42,0,357	0/0:17,0:17:38.97:0,39,336	0/0:20,0:21:52.99:0,53,442	0/0:11,0:11:26.99:0,27,234
chr10	15405157	.	CAAAT	C	1869.35	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=6.513;DP=548;FS=11.625;HRun=0;HaplotypeScore=101.0215;InbreedingCoeff=0.9675;MQ=55.49;MQ0=12;MQRankSum=-1.029;QD=18.15;ReadPosRankSum=-0.045;VQSLOD=2.7317;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,99,1852	0/0:6,0:6:15:0,15,269	0/0:15,0:6:18.04:0,18,188	0/0:7,0:2:6.02:0,6,67	1/1:4,22:26:56.49:634,56,0	1/1:1,24:25:39.07:625,39,0	1/1:3,14:17:21.07:354,21,0	0/0:30,0:29:45:0,45,458	0/0:16,0:16:45.13:0,45,938	0/0:22,0:22:42.09:0,42,709	0/0:22,0:22:42.01:0,42,711	0/0:23,0:23:48.10:0,48,943	0/0:17,0:17:42.05:0,42,645	0/0:15,0:15:29.92:0,30,622	0/0:23,0:23:51.12:0,51,1027	0/0:22,0:21:60.09:0,60,1144	0/0:30,0:30:75.01:0,75,1362	0/0:31,0:30:42.78:0,43,1192	1/1:11,0:14:17.76:152,18,0	1/1:6,0:10:26.69:199,27,0	1/1:9,0:9:14.35:91,14,0	0/0:21,0:21:45.06:0,45,758	0/0:18,0:18:42.09:0,42,817	0/0:19,0:19:48.11:0,48,891	0/0:21,0:21:51.08:0,51,836	0/0:19,0:19:48.11:0,48,843	0/0:18,0:18:40.84:0,41,548	0/0:15,0:15:33.06:0,33,613
chr10	15406801	.	TC	T	3136.62	PASS	AB=0.520;AC=21;AF=0.375;AN=56;BaseQRankSum=12.027;DP=330;FS=6.400;HRun=1;HaplotypeScore=42.2124;InbreedingCoeff=0.8404;MQ=54.84;MQ0=7;MQRankSum=4.815;QD=28.01;ReadPosRankSum=2.784;VQSLOD=3.1752;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,18:24:57.14:695,57,0	0/0:3,0:3:9.03:0,9,144	0/0:7,0:3:6.02:0,6,96	0/0:14,0:6:3.23:0,3,172	0/0:11,0:11:30.10:0,30,480	0/0:16,0:16:42.14:0,42,671	0/0:14,0:14:36.12:0,36,575	0/0:21,0:21:63.21:0,63,1007	0/0:14,0:14:39.13:0,39,623	0/0:13,0:13:39.13:0,39,622	0/0:5,0:5:15.05:0,15,240	1/1:0,7:7:21.07:273,21,0	1/1:1,7:8:21.07:273,21,0	1/1:0,12:12:30.10:389,30,0	1/1:0,7:7:15.05:195,15,0	0/1:1,12:13:13.88:355,0,14	0/0:22,0:21:42.13:0,42,647	1/1:2,15:17:36.12:467,36,0	0/0:16,0:15:42.13:0,42,649	0/0:15,0:15:39.13:0,39,623	0/0:11,0:10:27.09:0,27,431	1/1:0,6:6:12.04:155,12,0	1/1:0,11:11:24.08:312,24,0	1/1:0,1:1:3.01:39,3,0	1/1:0,6:6:15.05:195,15,0	0/0:14,0:13:39.13:0,39,624	0/0:12,0:12:33.11:0,33,527	0/0:10,0:9:27.09:0,27,431
chr10	15408188	.	TG	T	1235.13	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-3.801;DP=362;FS=0.000;HRun=12;HaplotypeScore=45.5689;InbreedingCoeff=0.7016;MQ=69.47;MQ0=21;MQRankSum=2.500;QD=6.18;ReadPosRankSum=3.137;VQSLOD=1.0661;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:20,3:22:19.92:139,20,0	0/0:3,0:3:0:0,0,0	0/0:25,0:14:18.80:0,19,172	0/0:13,0:8:12.01:0,12,112	1/1:4,7:12:10.86:67,11,0	1/1:10,9:18:5.22:128,5,0	1/1:4,14:18:23.01:187,23,0	0/0:12,0:11:3.01:0,3,31	0/0:8,0:6:5.94:0,6,42	0/0:10,0:10:3.40:0,3,18	0/0:6,0:9:5.97:0,6,46	1/1:5,7:12:11.94:93,12,0	1/1:3,7:9:14.93:115,15,0	1/1:2,4:7:10.86:75,11,0	1/1:13,4:16:13.90:111,14,0	1/1:3,14:16:23.90:185,24,0	0/0:6,0:14:5.78:0,6,32	1/1:15,10:21:14.17:115,14,0	0/0:8,0:11:8.52:0,9,43	0/0:3,0:3:2.84:0,3,14	0/0:15,0:13:5.96:0,6,46	1/1:2,1:4:8.77:60,9,0	1/1:5,6:13:14.22:78,14,0	1/1:6,1:6:5.01:27,5,0	1/1:7,6:13:5.97:46,6,0	0/0:10,0:10:5.96:0,6,43	0/0:10,0:20:8.65:0,9,49	0/0:5,0:7:2.96:0,3,19
chr10	15410571	.	TCC	T	815.43	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=1.843;DP=351;FS=37.340;HRun=12;HaplotypeScore=47.4203;InbreedingCoeff=0.5617;MQ=62.25;MQ0=1;MQRankSum=1.027;QD=7.84;ReadPosRankSum=2.269;VQSLOD=-0.6235;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:11:6.02:0,6,87	0/0:7,0:7:14.98:0,15,129	0/0:25,0:14:18.03:0,18,124	0/1:19,0:9:2.88:3,0,44	0/0:8,0:8:8.13:0,8,85	0/0:12,0:15:18.02:0,18,180	0/1:9,0:13:0:0,0,0	0/0:15,0:17:8.99:0,9,92	0/0:8,0:7:9.01:0,9,114	0/1:12,0:12:4.47:4,0,71	0/0:7,0:7:15.02:0,15,174	0/0:11,0:10:9:0,9,105	0/0:8,0:7:12:0,12,140	0/0:7,0:7:6.02:0,6,75	0/0:4,0:4:6.02:0,6,89	0/0:10,0:9:17.54:0,18,218	0/0:16,0:18:26.58:0,27,364	0/0:8,0:8:11.98:0,12,122	1/1:9,9:18:29.83:282,30,0	1/1:9,13:23:40.85:356,41,0	1/1:5,14:19:32.94:312,33,0	0/0:9,0:9:9.03:0,9,128	0/0:15,0:15:18.02:0,18,225	0/0:21,0:21:30.85:0,31,412	0/0:13,0:13:29.60:0,30,368	0/0:6,0:6:3.01:0,3,40	0/0:10,0:10:9.64:0,10,82	0/0:7,0:8:9.03:0,9,116
chr10	15410725	.	C	CTGTGTGTGTG	7739.94	PASS	AB=0.947;AC=44;AF=0.846;AN=52;BaseQRankSum=-1.783;DP=542;FS=0.000;HRun=0;HaplotypeScore=192.1811;InbreedingCoeff=0.2162;MQ=66.25;MQ0=12;MQRankSum=-1.317;QD=16.97;ReadPosRankSum=2.551;VQSLOD=3.6312;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:22,2:27:1.53:233,2,0	0/0:12,0:12:0.47:0,0,1	0/0:38,0:29:5.98:0,6,71	./.	1/1:15,0:15:3.01:106,3,0	1/1:17,0:17:12.04:462,12,0	1/1:28,0:28:9.48:135,9,0	0/1:21,0:21:76.31:218,0,76	0/1:15,0:12:0.08:0,0,0	1/1:29,0:29:24.06:645,24,0	1/1:20,0:23:6.02:260,6,0	1/1:14,2:16:3.01:149,3,0	1/1:10,3:14:11.63:422,12,0	1/1:14,4:19:11.57:564,12,0	1/1:11,4:16:15.05:667,15,0	1/1:12,5:17:12.04:537,12,0	1/1:18,0:20:18.01:697,18,0	1/1:12,0:12:6.02:202,6,0	1/1:20,0:20:16.13:612,16,0	1/1:4,0:16:3.01:129,3,0	0/1:22,0:20:64.80:111,0,65	1/1:14,2:17:3.01:149,3,0	1/1:14,3:19:9.03:387,9,0	1/1:12,5:17:5.61:197,6,0	0/1:11,0:15:0:0,0,0	1/1:16,0:17:20.74:681,21,0	1/1:21,0:20:6.02:178,6,0	./.
chr10	15412318	.	A	ATT	1734.62	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-5.148;DP=716;FS=0.000;HRun=10;HaplotypeScore=83.6882;InbreedingCoeff=0.9612;MQ=70.77;MQ0=0;MQRankSum=0.639;QD=26.69;ReadPosRankSum=-1.907;VQSLOD=3.2867;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:66.95:0,67,665	0/0:11,0:11:24.01:0,24,244	0/0:9,0:9:8.23:0,8,87	0/0:13,0:13:14.66:0,15,119	0/0:37,0:38:78.17:0,78,898	0/0:30,0:29:81.09:0,81,802	0/0:21,0:21:54.09:0,54,549	0/0:33,0:34:60.43:0,60,741	0/0:21,0:22:47.79:0,48,531	0/0:47,0:48:99:0,111,1099	0/0:19,0:19:14.08:0,14,341	0/0:16,0:16:45.10:0,45,458	0/0:29,0:29:78.12:0,78,779	0/0:21,0:21:54.07:0,54,549	0/0:37,0:37:22.10:0,22,589	0/0:21,0:21:54.09:0,54,549	0/0:25,0:25:66.12:0,66,671	0/0:14,0:14:26.97:0,27,264	1/1:5,9:14:30.10:444,30,0	1/1:7,21:30:60.09:807,60,0	1/1:2,19:21:42.14:626,42,0	0/0:28,0:29:65.85:0,66,717	0/0:24,0:24:48.04:0,48,488	0/0:24,0:24:63.09:0,63,641	0/0:33,0:34:90.11:0,90,900	0/0:40,0:42:92.85:0,93,927	0/0:37,0:37:99:0,102,1030	0/0:23,0:24:56.85:0,57,632
chr10	15414178	.	TCTGCTGCTG	T	1457.05	PASS	AC=10;AF=0.192;AN=52;BaseQRankSum=7.212;DP=567;FS=0.000;HRun=0;HaplotypeScore=147.1926;InbreedingCoeff=0.7599;MQ=68.52;MQ0=11;MQRankSum=-6.594;QD=15.18;ReadPosRankSum=-1.702;VQSLOD=2.5713;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:15.05:0,15,632	0/0:2,0:2:3.01:0,3,49	0/0:38,0:16:18.06:0,18,436	0/0:47,0:20:7.64:0,8,171	1/1:6,2:8:6.02:166,6,0	1/1:14,5:19:15.05:415,15,0	1/1:17,10:28:24.08:643,24,0	0/0:19,0:19:16.30:0,16,572	0/0:10,0:10:24.08:0,24,1080	0/0:12,0:11:1.72:0,2,4	./.	0/0:19,0:19:48.08:0,48,2011	0/0:25,0:25:42.14:0,42,1681	0/0:18,0:18:36.12:0,36,1602	0/0:27,0:27:60.21:0,60,2639	0/0:19,0:19:39.13:0,39,1661	0/0:36,0:36:74.26:0,74,3127	0/0:20,0:20:42.59:0,43,1649	1/1:16,0:22:12.04:252,12,0	1/1:16,0:19:8.62:136,9,0	0/0:18,0:18:0.47:0,0,1	0/0:11,0:11:3.01:0,3,125	./.	0/0:36,0:36:66.23:0,66,3012	0/0:8,0:8:9.03:0,9,293	0/0:17,0:17:6.01:0,6,152	0/0:29,0:29:48.64:0,49,1971	0/0:17,0:17:33.11:0,33,1376
chr10	15415233	.	CT	C	465.04	PASS	AB=0.818;AC=13;AF=0.232;AN=56;BaseQRankSum=3.335;DP=615;FS=4.717;HRun=16;HaplotypeScore=76.3900;InbreedingCoeff=0.1692;MQ=59.95;MQ0=14;MQRankSum=0.684;QD=2.35;ReadPosRankSum=3.364;VQSLOD=-0.5404;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:42,2:41:9.70:0,10,454	0/0:8,0:9:17.71:0,18,134	0/0:29,0:10:3.47:0,3,26	0/0:31,0:14:6.92:0,7,39	0/1:12,14:28:14.52:122,0,15	1/1:9,8:17:23.45:144,23,0	1/1:6,6:13:13.63:77,14,0	0/0:31,0:36:6.62:0,7,195	0/0:20,1:22:16.11:0,16,223	0/1:17,1:16:5.56:6,0,63	0/0:24,0:22:39.63:0,40,308	0/1:7,2:13:18.24:18,0,68	0/0:18,0:19:8.14:0,8,93	0/0:15,1:16:23.37:0,23,280	0/0:16,1:18:10.94:0,11,194	0/1:16,2:19:0.28:0,0,195	0/0:39,0:38:64.97:0,65,554	0/0:19,0:19:23.46:0,23,205	0/1:11,2:14:12.44:35,0,12	0/1:9,16:27:7.71:167,0,8	0/1:11,3:14:0.48:26,0,0	0/0:9,0:9:3.12:0,3,133	0/0:24,0:23:17.10:0,17,163	0/0:31,1:34:37.58:0,38,416	0/1:21,3:24:18.50:18,0,211	0/0:21,1:24:27.81:0,28,198	0/0:15,2:15:8.84:0,9,169	0/1:7,1:9:3.04:3,0,65
chr10	15415634	.	TA	T	3489.79	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=11.681;DP=707;FS=8.423;HRun=9;HaplotypeScore=72.6119;InbreedingCoeff=0.9352;MQ=76.37;MQ0=0;MQRankSum=-1.788;QD=22.37;ReadPosRankSum=0.138;VQSLOD=4.2125;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,129,1473	0/0:15,1:16:14.64:0,15,412	0/0:24,0:25:12.39:0,12,332	0/1:11,0:10:0.65:1,0,124	1/1:1,30:32:80.08:720,80,0	1/1:1,17:18:51.03:467,51,0	1/1:1,18:19:48.02:439,48,0	0/0:40,0:41:99:0,105,1158	0/0:33,0:34:87.13:0,87,973	0/0:32,0:32:87.24:0,87,987	0/0:25,0:25:63.19:0,63,727	0/0:15,0:15:42.12:0,42,485	0/0:20,0:20:54.13:0,54,609	0/0:22,0:22:20.69:0,21,492	0/0:30,1:31:50.76:0,51,837	0/0:32,0:32:55.12:0,55,825	0/0:32,0:32:75.19:0,75,843	0/0:14,0:14:42.12:0,42,483	1/1:1,22:23:66.03:600,66,0	1/1:3,33:36:96.04:879,96,0	1/1:3,14:17:42.02:384,42,0	0/0:21,0:21:60.13:0,60,654	0/0:21,0:21:54.16:0,54,623	0/0:28,1:29:53.76:0,54,862	0/0:20,0:20:45.08:0,45,504	0/0:27,0:27:75.22:0,75,865	0/0:32,0:32:90.22:0,90,1007	0/0:13,0:13:36.11:0,36,415
chr10	15420795	.	AT	A	890.18	PASS	AB=0.906;AC=9;AF=0.161;AN=56;BaseQRankSum=4.016;DP=551;FS=7.437;HRun=12;HaplotypeScore=56.9955;InbreedingCoeff=0.5431;MQ=64.08;MQ0=15;MQRankSum=1.927;QD=8.64;ReadPosRankSum=1.717;VQSLOD=2.1690;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:36:78.10:0,78,762	0/1:8,1:9:2.18:2,0,143	0/0:38,0:6:6.42:0,6,29	0/0:21,0:11:3:0,3,28	1/1:11,25:35:57.64:473,58,0	1/1:2,14:16:32.87:255,33,0	1/1:3,14:17:35.85:278,36,0	0/0:28,0:28:56.96:0,57,529	0/0:6,0:6:12.02:0,12,121	0/0:29,0:29:56.01:0,56,519	0/0:19,0:19:38.86:0,39,370	0/0:10,0:10:26.99:0,27,250	0/0:12,0:11:15.22:0,15,177	0/0:13,0:14:29.66:0,30,247	0/0:13,0:13:29.89:0,30,286	0/1:7,2:9:19.26:19,0,181	0/0:32,0:33:78.42:0,78,753	0/0:17,1:20:24.27:0,24,386	0/0:17,0:29:46.61:0,47,255	0/0:5,0:22:36.89:0,37,185	0/0:3,0:8:11.36:0,11,57	0/0:14,0:14:32.95:0,33,293	0/0:19,0:19:16.46:0,16,311	0/1:16,0:16:15.31:15,0,173	0/0:27,0:27:56.85:0,57,528	0/0:20,0:20:32.91:0,33,304	0/0:21,0:22:15.40:0,15,372	0/0:1,0:1:3.01:0,3,30
chr10	15423164	.	CT	C	389.80	PASS	AB=0.876;AC=9;AF=0.161;AN=56;BaseQRankSum=3.506;DP=541;FS=7.479;HRun=15;HaplotypeScore=60.0636;InbreedingCoeff=0.3594;MQ=66.13;MQ0=7;MQRankSum=2.038;QD=2.95;ReadPosRankSum=0.397;VQSLOD=-0.7033;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:41.85:0,42,365	0/0:9,0:10:15.06:0,15,158	0/0:16,0:7:11.96:0,12,95	0/1:12,0:9:10.08:10,0,13	0/1:10,22:32:24.77:214,0,25	1/1:3,13:17:28.57:179,29,0	1/1:3,9:12:17.66:115,18,0	0/1:21,2:23:0.68:1,0,219	0/0:18,1:19:16.69:0,17,262	0/0:21,2:23:22.65:0,23,306	0/0:21,1:23:19.94:0,20,264	0/0:17,0:18:38.77:0,39,319	0/0:11,1:11:1.56:0,2,116	0/0:14,1:15:4.39:0,4,141	0/0:19,0:19:41.96:0,42,359	0/0:16,1:17:28.93:0,29,210	0/0:27,2:29:43.71:0,44,501	0/1:16,3:19:2.65:3,0,216	0/0:21,0:21:38.95:0,39,331	0/0:19,0:19:23.82:0,24,195	0/0:5,0:6:8.99:0,9,76	0/0:13,0:13:10.45:0,10,139	0/0:23,2:25:31.58:0,32,373	0/1:11,0:16:2.50:2,0,67	0/0:30,3:33:22.03:0,22,393	0/0:29,3:32:17.37:0,17,370	0/0:17,1:18:21.47:0,21,287	0/0:8,0:10:19.86:0,20,148
chr10	15423728	.	G	GT	2290.12	PASS	AB=0.809;AC=14;AF=0.250;AN=56;BaseQRankSum=7.752;DP=519;FS=6.990;HRun=11;HaplotypeScore=65.3543;InbreedingCoeff=0.6519;MQ=74.99;MQ0=0;MQRankSum=-0.934;QD=16.01;ReadPosRankSum=0.700;VQSLOD=4.2565;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:95.54:0,96,738	0/1:5,1:6:15.50:15,0,78	0/0:25,0:21:35.74:0,36,219	0/0:12,0:9:12.10:0,12,81	1/1:7,18:26:17.74:496,18,0	1/1:3,22:27:36.55:523,37,0	1/1:2,8:10:24.05:244,24,0	0/0:31,0:31:59.68:0,60,459	0/0:18,0:19:40.85:0,41,307	0/0:25,0:25:59.73:0,60,464	0/0:18,1:20:19.40:0,19,323	0/0:21,0:22:55.81:0,56,420	0/1:6,1:7:12.47:12,0,98	0/0:23,0:23:50.78:0,51,395	0/0:17,0:18:34.87:0,35,259	0/0:16,0:16:14.45:0,14,292	0/0:17,0:17:50.76:0,51,389	0/0:16,0:17:16.43:0,16,300	0/1:7,15:24:2.31:416,0,2	1/1:1,16:19:33.67:489,34,0	1/1:1,11:13:26.89:258,27,0	0/0:9,0:9:17.87:0,18,139	0/0:17,0:18:40.87:0,41,306	0/0:13,0:13:34.86:0,35,256	0/0:17,0:18:49.84:0,50,377	0/1:10,1:11:21.31:21,0,135	0/0:26,0:27:25.32:0,25,369	0/0:6,0:6:17.93:0,18,139
chr10	15424909	.	C	CT	1551.58	PASS	AB=0.737;AC=41;AF=0.732;AN=56;BaseQRankSum=-3.087;DP=391;FS=0.843;HRun=17;HaplotypeScore=43.1588;InbreedingCoeff=-0.0578;MQ=69.89;MQ0=9;MQRankSum=-0.466;QD=4.32;ReadPosRankSum=0.924;VQSLOD=0.3336;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,11:18:2.99:23,3,0	1/1:3,3:6:5.98:45,6,0	1/1:20,0:7:0.89:2,1,0	0/0:25,0:13:4.69:0,5,20	1/1:5,1:17:6.45:80,6,0	1/1:8,9:19:2.73:50,3,0	1/1:7,1:7:2.99:23,3,0	0/1:25,3:29:10.55:129,0,11	1/1:0,4:4:5.98:45,6,0	1/1:13,6:19:23.70:154,24,0	1/1:10,3:13:17.41:117,17,0	0/0:2,3:6:2.02:0,2,6	1/1:2,5:7:2.99:23,3,0	0/1:3,3:6:6.46:37,0,6	0/1:3,3:6:4.10:17,0,4	0/1:12,3:13:2.52:83,0,3	0/1:12,17:29:5.24:150,0,5	0/1:5,7:12:6.87:20,0,7	0/1:15,1:23:0.08:126,0,0	1/1:14,0:14:0.04:58,0,0	1/1:9,1:10:17.49:105,17,0	0/1:3,0:4:0:0,0,0	0/1:8,0:8:19.11:33,0,19	1/1:2,2:4:5.83:37,6,0	0/1:10,9:21:3.44:85,0,3	1/1:8,12:20:19.02:117,19,0	1/1:7,8:15:0.43:77,0,0	0/1:3,5:9:3.88:39,0,4
chr10	15425859	.	AAG	A	5312.65	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=11.741;DP=678;FS=2.108;HRun=0;HaplotypeScore=80.8991;InbreedingCoeff=0.9994;MQ=85.34;MQ0=1;MQRankSum=-1.720;QD=35.90;ReadPosRankSum=0.456;VQSLOD=6.9048;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,114,2013	0/0:8,0:8:24.08:0,24,427	0/0:33,1:30:89.94:0,90,1479	0/0:31,0:30:83.60:0,84,1372	1/1:1,12:12:30.10:420,30,0	1/1:0,18:18:54.18:756,54,0	1/1:4,31:35:75.01:1050,75,0	0/0:21,0:21:63.19:0,63,1020	0/0:25,0:25:69.24:0,69,1242	0/0:22,0:22:63.21:0,63,1107	0/0:15,0:15:39.13:0,39,702	0/0:28,0:28:84.28:0,84,1473	0/0:21,0:21:57.20:0,57,1021	0/0:27,0:27:81.26:0,81,1428	0/0:34,0:34:99:0,99,1752	0/0:18,0:18:48.16:0,48,860	0/0:27,0:26:75.26:0,75,1338	0/0:23,0:23:63.16:0,63,1089	1/1:5,28:33:87.24:1164,87,0	1/1:1,23:24:72.24:999,72,0	1/1:1,24:25:66.22:924,66,0	0/0:18,0:18:51.17:0,51,899	0/0:19,0:19:57.20:0,57,1025	0/0:39,0:38:99:0,108,1865	0/0:19,0:19:54.18:0,54,957	0/0:28,0:28:78.26:0,78,1377	0/0:21,0:20:57.20:0,57,1026	0/0:12,0:12:36.12:0,36,625
chr10	15428537	.	T	TA	1352.26	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=0.367;DP=438;FS=6.926;HRun=7;HaplotypeScore=54.4675;InbreedingCoeff=0.7830;MQ=60.56;MQ0=3;MQRankSum=-2.551;QD=20.49;ReadPosRankSum=-0.137;VQSLOD=2.7635;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:60.03:0,60,554	0/0:11,0:11:29.98:0,30,274	0/1:18,0:9:9.98:10,0,67	0/0:17,0:5:5.59:0,6,24	1/1:5,17:22:54.11:628,54,0	1/1:2,17:19:55.93:626,56,0	1/1:0,7:7:21.02:235,21,0	0/0:28,0:28:69.08:0,69,656	0/0:15,0:15:39.01:0,39,359	0/0:21,0:21:60.08:0,60,573	0/0:16,0:16:38.98:0,39,359	0/0:10,0:10:27.02:0,27,254	0/0:8,0:8:15.02:0,15,145	0/0:6,0:6:11.95:0,12,100	0/0:11,0:11:26.91:0,27,237	0/0:9,0:9:26.99:0,27,250	0/0:20,0:20:51.02:0,51,471	0/0:21,0:21:48.05:0,48,453	0/0:32,0:32:68.96:0,69,628	0/0:19,0:19:48.06:0,48,456	0/0:5,0:5:9.01:0,9,87	0/0:6,0:6:17.69:0,18,152	0/0:10,0:10:30.02:0,30,279	0/0:5,0:5:15.01:0,15,139	0/0:19,0:19:47.97:0,48,441	0/0:20,0:20:57.07:0,57,544	0/0:27,0:27:75.06:0,75,703	0/0:12,0:12:30.05:0,30,289
chr10	15428568	.	GTTT	G	1312.09	PASS	AB=0.935;AC=13;AF=0.232;AN=56;BaseQRankSum=8.868;DP=420;FS=5.089;HRun=15;HaplotypeScore=70.8042;InbreedingCoeff=0.8283;MQ=61.09;MQ0=6;MQRankSum=-2.751;QD=10.67;ReadPosRankSum=2.266;VQSLOD=0.4857;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:22:51.13:0,51,834	0/0:11,0:11:33.11:0,33,593	0/0:45,0:12:23.99:0,24,302	0/1:27,0:6:6.99:7,0,16	1/1:10,16:27:16.80:391,17,0	1/1:4,13:18:39.93:451,40,0	1/1:1,6:6:9.02:101,9,0	0/0:22,0:22:39.11:0,39,626	0/0:10,0:12:27.07:0,27,458	0/0:16,0:16:31.34:0,31,525	0/0:11,0:12:27.07:0,27,438	0/0:6,0:6:15.05:0,15,275	0/0:4,0:5:9.01:0,9,127	0/0:4,0:4:9.03:0,9,152	0/0:6,0:8:24.06:0,24,390	0/0:5,0:7:18.02:0,18,264	0/0:16,0:17:51.09:0,51,799	0/0:16,0:18:48.14:0,48,815	1/1:8,0:21:25.31:268,25,0	1/1:5,0:18:41.19:254,41,0	1/1:1,0:2:2.94:18,3,0	0/0:4,0:5:12.02:0,12,188	0/0:8,0:8:21.02:0,21,280	0/0:4,0:4:12.04:0,12,219	0/0:17,0:19:54.18:0,54,953	0/0:16,0:19:48.06:0,48,751	0/0:23,0:25:72.20:0,72,1212	0/0:10,0:11:33.07:0,33,499
chr10	15430099	.	TTGTG	T	290.22	PASS	AB=0.932;AC=14;AF=0.269;AN=52;BaseQRankSum=-0.212;DP=549;FS=1.087;HRun=0;HaplotypeScore=111.9470;InbreedingCoeff=0.2385;MQ=70.75;MQ0=13;MQRankSum=-0.106;QD=1.69;ReadPosRankSum=-0.695;VQSLOD=2.2005;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:27:24.03:0,24,326	0/1:7,0:7:7.38:7,0,19	./.	0/0:36,0:19:0:0,0,0	0/0:21,0:21:17.97:0,18,251	0/0:25,0:25:32.88:0,33,613	0/0:25,0:25:20.95:0,21,364	0/0:31,0:29:1.82:0,2,5	1/1:7,0:7:3.01:46,3,0	0/1:21,0:21:42.39:42,0,45	./.	0/0:14,0:14:12.04:0,12,208	0/0:8,0:8:9.50:0,10,180	0/0:8,0:9:11.77:0,12,171	0/0:18,0:17:15.02:0,15,216	0/0:6,0:14:9.03:0,9,151	0/1:21,4:24:45.61:114,0,46	0/0:14,0:13:2.89:0,3,130	0/1:26,0:27:8.23:8,0,12	1/1:23,0:22:3:32,3,0	0/1:24,5:28:6.97:38,0,7	1/1:5,0:5:0.47:1,0,0	0/0:15,0:15:5.90:0,6,86	0/0:19,0:18:20.10:0,20,342	0/0:26,0:26:14.80:0,15,223	0/0:18,0:21:5.84:0,6,34	0/1:15,1:16:0.79:89,0,1	1/1:10,1:10:3.01:46,3,0
chr10	15430627	.	C	CTGTGGTAATACATGG	18273.91	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-1.435;DP=783;FS=0.787;HRun=0;HaplotypeScore=300.9744;InbreedingCoeff=0.9999;MQ=88.42;MQ0=0;MQRankSum=-15.605;QD=100.41;ReadPosRankSum=-4.815;VQSLOD=2.8406;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,117,4711	0/0:12,0:12:33.11:0,33,1337	0/0:26,0:27:68.70:0,69,2105	0/0:37,0:37:83.51:0,84,3117	1/1:10,27:45:80.86:4432,81,0	1/1:7,13:28:48.12:3062,48,0	1/1:11,7:26:38.92:2107,39,0	0/0:35,0:35:78.24:0,78,2775	0/0:23,0:23:63.22:0,63,2611	0/0:30,0:30:87.27:0,87,3156	0/0:29,0:29:75.23:0,75,2695	0/0:25,0:25:66.23:0,66,2737	0/0:19,0:19:54.17:0,54,2093	0/0:24,0:24:69.24:0,69,2888	0/0:30,0:30:81.26:0,81,3316	0/0:30,0:30:84.27:0,84,3115	0/0:28,0:28:74.89:0,75,2571	0/0:15,0:15:42.08:0,42,1517	1/1:9,5:16:41.21:1915,41,0	1/1:18,16:39:99:4698,99,0	1/1:25,3:28:57.01:2060,57,0	0/0:20,0:20:59.99:0,60,2337	0/0:35,0:35:99:0,102,3915	0/0:27,0:27:78.27:0,78,3312	0/0:24,0:24:66.21:0,66,2666	0/0:45,0:45:99:0,123,4797	0/0:30,0:30:87.02:0,87,3473	0/0:14,0:14:42.14:0,42,1809
chr10	15430691	.	CT	C	979.96	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=6.906;DP=696;FS=7.933;HRun=13;HaplotypeScore=85.5569;InbreedingCoeff=0.9358;MQ=69.38;MQ0=2;MQRankSum=-0.105;QD=13.24;ReadPosRankSum=0.371;VQSLOD=3.5247;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:36.03:0,36,340	0/0:6,0:6:15.02:0,15,146	0/0:27,1:17:26.99:0,27,238	0/0:20,0:15:18.12:0,18,159	0/0:44,1:45:83.63:0,84,763	0/0:15,0:16:17.15:0,17,198	0/0:16,0:17:38.39:0,38,326	0/0:35,1:38:37.04:0,37,611	0/0:24,1:25:34.16:0,34,511	0/0:42,1:43:70.03:0,70,802	0/0:29,3:32:59.63:0,60,780	0/0:21,0:21:38.20:0,38,333	0/0:21,0:21:46.77:0,47,414	0/0:14,0:14:30.03:0,30,286	0/0:22,0:22:60.06:0,60,565	0/0:27,0:27:60.08:0,60,574	0/0:22,0:25:23.91:0,24,419	0/0:21,0:21:55.58:0,56,504	1/1:10,15:25:47.70:350,48,0	1/1:11,26:38:65.67:578,66,0	1/1:2,9:11:26.79:194,27,0	0/0:16,2:18:4.31:0,4,365	0/0:26,2:28:18.41:0,18,461	0/0:24,1:25:29.14:0,29,433	0/0:24,1:26:43.04:0,43,539	0/0:38,0:38:81.08:0,81,766	0/0:28,0:30:77.73:0,78,697	0/0:15,0:15:30.02:0,30,280
chr10	15431162	.	C	CT	806.52	PASS	AB=0.545;AC=5;AF=0.089;AN=56;BaseQRankSum=-4.056;DP=686;FS=10.271;HRun=10;HaplotypeScore=68.1666;InbreedingCoeff=0.7763;MQ=60.95;MQ0=7;MQRankSum=-1.129;QD=13.91;ReadPosRankSum=-1.986;VQSLOD=2.3436;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:46:99:0,111,828	0/0:11,0:11:32.96:0,33,271	0/0:12,0:9:12.26:0,12,111	0/0:8,0:4:5.13:0,5,28	0/0:27,0:27:66.77:0,67,523	0/0:19,0:21:58.93:0,59,468	0/0:20,0:20:50.89:0,51,409	0/0:30,0:29:65.87:0,66,537	0/0:21,0:21:53.91:0,54,440	0/0:34,0:34:89.88:0,90,739	0/0:30,0:31:57.17:0,57,448	0/0:24,0:25:58.89:0,59,466	0/0:24,1:25:27.90:0,28,430	0/0:21,0:22:57.78:0,58,454	0/0:26,0:26:65.88:0,66,542	0/0:18,0:18:41.89:0,42,339	0/0:28,0:27:68.90:0,69,565	0/0:19,0:18:43.70:0,44,346	0/1:3,15:16:2.41:353,0,2	1/1:7,21:28:26.45:471,26,0	1/1:3,7:12:8.02:104,8,0	0/0:31,0:34:79.72:0,80,621	0/0:32,0:33:85.83:0,86,687	0/0:23,1:25:14.87:0,15,394	0/0:25,0:26:64.92:0,65,521	0/0:28,0:28:71.88:0,72,589	0/0:33,0:33:88.92:0,89,719	0/0:23,1:23:15.92:0,16,337
chr10	15431717	.	T	TAG	3668.23	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-12.395;DP=707;FS=0.000;HRun=0;HaplotypeScore=81.7978;InbreedingCoeff=0.9997;MQ=76.77;MQ0=1;MQRankSum=0.319;QD=46.43;ReadPosRankSum=1.257;VQSLOD=5.0520;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:89.95:0,90,1235	0/0:13,0:13:33.11:0,33,462	0/0:22,0:21:51.17:0,51,696	0/0:20,0:21:41.69:0,42,556	0/0:28,0:28:78.25:0,78,1075	0/0:23,0:23:66.22:0,66,924	0/0:14,0:14:42.14:0,42,587	0/0:26,0:26:60.20:0,60,838	0/0:18,0:18:54.17:0,54,739	0/0:31,0:31:90.30:0,90,1260	0/0:31,0:31:84.28:0,84,1176	0/0:24,0:24:66.19:0,66,888	0/0:29,0:29:81.24:0,81,1113	0/0:21,0:21:63.21:0,63,881	0/0:31,0:31:78.26:0,78,1093	0/0:16,0:16:45.15:0,45,630	0/0:27,0:27:81.27:0,81,1134	0/0:17,0:17:48.16:0,48,672	1/1:2,14:16:42.14:756,42,0	1/1:0,34:33:84.29:1508,84,0	1/1:1,28:29:78.27:1404,78,0	0/0:34,0:34:99:0,102,1419	0/0:31,0:31:87.29:0,87,1219	0/0:25,0:25:69.23:0,69,966	0/0:30,0:30:87.28:0,87,1202	0/0:39,0:39:99:0,111,1554	0/0:33,0:33:96.30:0,96,1324	0/0:11,0:11:30.10:0,30,420
chr10	15436386	.	G	GT	9792.06	PASS	AB=0.686;AC=47;AF=0.839;AN=56;BaseQRankSum=-6.330;DP=659;FS=2.034;HRun=12;HaplotypeScore=69.9964;InbreedingCoeff=0.0430;MQ=73.50;MQ0=1;MQRankSum=-0.766;QD=15.18;ReadPosRankSum=0.726;VQSLOD=5.7345;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:7,16:25:9.83:216,0,10	1/1:7,9:16:27.35:249,27,0	0/0:13,0:11:11.70:0,12,79	0/1:18,0:16:13.54:14,0,42	1/1:9,17:26:11.37:392,11,0	0/1:12,9:23:51.62:168,0,52	1/1:9,9:19:38.81:338,39,0	1/1:13,33:46:77.13:873,77,0	1/1:7,17:24:33.04:316,33,0	1/1:15,18:34:58.17:539,58,0	1/1:3,14:17:1.10:306,1,0	1/1:6,18:24:26.17:413,26,0	1/1:11,7:20:28.15:266,28,0	1/1:7,17:24:20.16:358,20,0	1/1:4,25:30:25.08:544,25,0	1/1:7,22:30:1.10:476,1,0	1/1:2,17:20:38.85:355,39,0	0/1:6,7:13:3.90:120,0,4	1/1:10,14:26:24.73:419,25,0	0/1:11,19:30:14.65:509,0,15	0/1:10,9:21:32.99:171,0,33	1/1:9,18:27:44.88:399,45,0	0/1:8,11:20:10.90:230,0,11	1/1:3,14:18:20.16:358,20,0	1/1:3,21:25:54.39:507,54,0	1/1:7,19:26:34.99:443,35,0	1/1:10,27:38:58.95:698,59,0	1/1:0,4:4:12.02:117,12,0
chr10	15438106	.	CTCCCTCCCTCCTTCCT	C	2849.54	PASS	AB=0.796;AC=13;AF=0.232;AN=56;BaseQRankSum=2.510;DP=326;FS=18.848;HRun=0;HaplotypeScore=126.1053;InbreedingCoeff=0.5674;MQ=52.71;MQ0=13;MQRankSum=2.615;QD=21.75;ReadPosRankSum=-0.938;VQSLOD=1.1740;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:14.41:0,14,209	0/0:4,0:3:6.02:0,6,168	1/1:16,0:5:4.39:15,4,0	0/0:20,0:6:8.94:0,9,81	0/1:2,0:17:5.15:239,0,5	0/1:15,0:17:15.58:483,0,16	1/1:19,0:17:12.92:445,13,0	0/0:13,0:11:17.98:0,18,279	0/0:7,0:7:20.42:0,20,588	0/0:12,0:11:32.78:0,33,652	0/0:7,0:7:14:0,14,125	0/0:12,0:12:1.22:0,1,626	0/0:6,0:5:14.53:0,15,186	0/0:3,0:3:8.70:0,9,207	0/0:14,0:13:15.55:0,16,288	0/0:11,0:11:24.06:0,24,382	0/0:6,0:6:15.04:0,15,406	0/0:9,0:9:20.88:0,21,263	1/1:2,9:11:26.85:520,27,0	1/1:1,21:22:48.09:1214,48,0	1/1:2,17:17:3.01:92,3,0	0/1:8,0:8:6.99:7,0,68	0/0:7,0:7:9.03:0,9,130	0/0:6,0:6:15.05:0,15,270	0/0:11,0:11:14.91:0,15,203	0/0:17,0:15:36.12:0,36,1050	0/0:7,0:7:21.05:0,21,504	0/0:10,0:10:24.08:0,24,389
chr10	15438114	.	CTCCTTCCT	C	2124.27	PASS	AC=32;AF=0.640;AN=50;BaseQRankSum=-0.285;DP=304;FS=44.218;HRun=0;HaplotypeScore=86.6933;InbreedingCoeff=0.6675;MQ=51.30;MQ0=15;MQRankSum=-0.293;QD=11.06;ReadPosRankSum=1.742;VQSLOD=-0.0800;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:7,2:9:9.03:170,9,0	0/0:3,0:2:3.01:0,3,47	./.	./.	1/1:17,0:17:3.67:20,4,0	1/1:17,0:16:17.12:183,17,0	1/1:19,0:17:9.89:50,10,0	0/0:12,0:9:6.02:0,6,78	0/0:7,0:7:12.02:0,12,241	0/0:13,0:12:20.88:0,21,330	0/0:6,0:6:8.99:0,9,119	1/1:8,1:9:14.94:173,15,0	1/1:3,3:5:12.04:278,12,0	1/1:3,0:3:8.94:71,9,0	1/1:6,10:15:2.28:59,2,0	1/1:4,6:10:8.63:223,9,0	0/0:4,0:4:3.01:0,3,72	1/1:8,1:9:2.79:160,3,0	1/1:11,0:11:12.04:184,12,0	1/1:21,0:21:33.11:457,33,0	1/1:19,0:17:2.84:14,3,0	1/1:1,0:6:3.01:38,3,0	./.	1/1:8,1:9:12:163,12,0	1/1:4,7:11:3.01:55,3,0	0/0:18,0:16:24.08:0,24,613	0/0:7,0:6:9.03:0,9,230	0/0:13,0:13:9.03:0,9,130
chr10	15438194	.	C	CT	576.07	PASS	AB=0.902;AC=13;AF=0.232;AN=56;BaseQRankSum=-0.670;DP=390;FS=4.054;HRun=13;HaplotypeScore=56.4206;InbreedingCoeff=0.0543;MQ=62.38;MQ0=8;MQRankSum=0.328;QD=3.82;ReadPosRankSum=-1.183;VQSLOD=0.2412;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,1:30:39.42:0,39,339	0/0:4,1:5:8.89:0,9,62	0/1:12,0:8:14.31:14,0,35	0/0:11,0:7:5.30:0,5,30	1/1:5,9:16:3:127,3,0	1/1:7,9:16:30.41:261,30,0	0/1:8,9:17:22.85:216,0,23	0/0:14,0:13:20.38:0,20,129	0/0:9,0:10:10.96:0,11,100	0/1:4,1:5:34.33:34,0,46	0/0:7,0:7:17.80:0,18,120	0/0:10,1:13:31.73:0,32,211	0/1:11,1:12:6.97:7,0,102	0/0:7,0:7:17.83:0,18,123	0/0:12,0:12:14.76:0,15,103	0/0:16,0:17:28.76:0,29,186	0/0:11,0:9:23.80:0,24,164	0/1:14,1:13:4.56:5,0,107	0/0:18,1:19:7.89:0,8,201	0/0:17,1:19:6.90:0,7,184	0/1:17,1:17:1.09:1,0,137	0/0:11,0:11:22.85:0,23,148	0/0:12,0:12:20.17:0,20,143	0/0:21,0:24:13:0,13,214	0/1:12,2:14:29.50:30,0,98	0/1:15,1:16:17.97:18,0,159	0/1:7,0:6:11.29:11,0,70	0/0:15,0:15:38.61:0,39,265
chr10	15439841	.	T	TA	1643.62	PASS	AB=0.840;AC=28;AF=0.500;AN=56;BaseQRankSum=-0.778;DP=479;FS=19.919;HRun=15;HaplotypeScore=69.0757;InbreedingCoeff=0.4036;MQ=58.28;MQ0=4;MQRankSum=-0.963;QD=5.53;ReadPosRankSum=-3.598;VQSLOD=-0.0245;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:21,3:24:16.83:56,0,17	0/0:6,0:8:12.80:0,13,65	1/1:9,0:1:0.47:1,0,0	0/0:9,0:3:3.92:0,4,13	0/1:23,2:27:55.20:55,0,142	0/0:17,0:17:25.73:0,26,150	0/0:9,0:10:19.60:0,20,113	0/1:29,1:32:0.29:0,0,126	0/0:14,0:14:32.18:0,32,193	0/0:26,1:26:36.29:0,36,211	0/0:20,0:18:12.49:0,12,82	1/1:3,9:12:7.16:159,7,0	0/1:4,9:13:0.03:108,0,0	1/1:10,2:14:16.85:116,17,0	0/1:9,7:16:4.78:66,0,5	1/1:2,7:9:5.99:50,6,0	0/1:17,0:18:18.64:19,0,103	1/1:7,11:18:31.46:237,31,0	0/1:17,3:20:14.08:121,0,14	1/1:7,21:28:28.59:316,29,0	0/1:7,3:10:8.06:38,0,8	1/1:1,2:3:3:25,3,0	1/1:2,8:10:4.44:69,4,0	1/1:4,9:13:17.98:151,18,0	1/1:12,5:18:32.69:240,33,0	0/0:25,0:27:16.04:0,16,195	0/0:24,1:27:16.88:0,17,202	0/0:22,0:22:22.65:0,23,133
chr10	15440673	.	A	AG	4003.53	PASS	AB=0.791;AC=46;AF=0.821;AN=56;BaseQRankSum=2.135;DP=491;FS=95.732;HRun=0;HaplotypeScore=87.1888;InbreedingCoeff=-0.0828;MQ=63.48;MQ0=17;MQRankSum=1.973;QD=8.74;ReadPosRankSum=7.466;VQSLOD=-0.3201;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,21:35:59.55:467,60,0	0/1:7,0:7:5.30:68,0,5	0/0:33,0:14:4.55:0,5,113	0/1:26,0:12:44.54:45,0,105	1/1:18,0:18:25.22:156,25,0	1/1:17,0:17:36.79:170,37,0	1/1:12,0:12:25.68:104,26,0	0/1:14,9:22:62.51:130,0,63	0/1:5,11:16:11.11:17,0,11	0/1:8,1:14:21.78:139,0,22	1/1:4,15:19:32.96:262,33,0	1/1:11,0:11:4.82:102,5,0	0/1:5,5:10:20.98:23,0,21	1/1:9,2:11:20.54:187,21,0	1/1:11,0:11:8.01:131,8,0	1/1:11,3:14:15.78:206,16,0	1/1:21,20:39:1.28:258,1,0	1/1:20,0:16:3.87:148,4,0	0/1:16,0:15:1.37:135,0,1	1/1:20,0:20:37.45:249,37,0	1/1:14,0:10:16.87:93,17,0	1/1:7,4:10:0.87:97,1,0	1/1:5,1:6:17.85:140,18,0	1/1:20,1:21:12.67:153,13,0	0/1:8,7:16:39.83:40,0,56	1/1:10,11:22:14.79:293,15,0	1/1:15,2:17:0.47:123,0,0	1/1:7,1:7:10.68:69,11,0
chr10	15441402	.	T	TC	3608.16	PASS	AB=0.613;AC=28;AF=0.500;AN=56;BaseQRankSum=-7.609;DP=557;FS=18.795;HRun=10;HaplotypeScore=79.0551;InbreedingCoeff=0.6550;MQ=91.83;MQ0=2;MQRankSum=-1.496;QD=13.51;ReadPosRankSum=0.987;VQSLOD=2.0045;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:77.81:0,78,630	1/1:1,2:3:3.01:32,3,0	0/0:43,0:35:72.34:0,72,492	0/0:40,0:29:11.69:0,12,243	1/1:7,0:7:2.91:25,3,0	1/1:8,21:29:32.08:377,32,0	1/1:5,20:25:36.02:363,36,0	0/1:16,13:29:10.12:235,0,10	1/1:3,17:20:27.16:487,27,0	0/1:5,7:13:0.60:184,0,1	1/1:3,5:8:11.92:94,12,0	0/0:21,0:21:47.02:0,47,368	1/1:3,13:15:18.03:185,18,0	0/1:5,12:17:25.11:168,0,25	0/0:27,0:27:68.88:0,69,560	0/0:18,0:19:47.80:0,48,379	1/1:8,14:22:27:273,27,0	0/0:12,0:12:29.95:0,30,244	0/0:1,0:13:23.99:0,24,70	0/0:2,0:17:31.06:0,31,107	0/0:7,0:41:57.99:0,58,183	0/0:10,0:10:26.31:0,26,201	1/1:3,6:9:11.79:128,12,0	1/1:8,16:24:26.27:314,26,0	0/0:10,0:10:29.92:0,30,238	1/1:10,17:27:6.48:429,6,0	1/1:1,11:13:2.44:230,2,0	0/1:1,4:5:12.59:84,0,13
chr10	15441657	.	GC	G	2717.52	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.761;DP=699;FS=9.845;HRun=1;HaplotypeScore=66.5359;InbreedingCoeff=0.9996;MQ=87.01;MQ0=0;MQRankSum=-0.789;QD=36.23;ReadPosRankSum=0.466;VQSLOD=3.3798;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:60,0:60:99:0,175,2690	0/0:12,0:12:36.08:0,36,525	0/0:29,0:30:83.19:0,83,1317	0/0:27,0:27:78.26:0,78,1200	0/0:26,0:26:78.24:0,78,1193	0/0:22,0:22:66.20:0,66,1024	0/0:36,0:36:99:0,108,1652	0/0:25,0:25:75.21:0,75,1170	0/0:19,0:19:57.19:0,57,911	0/0:16,0:16:48.12:0,48,717	0/0:12,0:12:33.11:0,33,527	0/0:23,0:23:69.19:0,69,1030	0/0:28,0:28:84.29:0,84,1342	0/0:22,0:22:66.23:0,66,1055	0/0:31,0:31:93.28:0,93,1438	0/0:19,0:19:57.19:0,57,911	0/0:28,0:28:84.25:0,84,1288	0/0:33,0:33:99:0,99,1582	1/1:0,16:16:45.12:590,45,0	1/1:0,19:19:51.08:677,51,0	1/1:0,40:40:99:1593,114,0	0/0:15,0:15:42.14:0,42,669	0/0:17,0:17:51.14:0,51,766	0/0:53,0:52:99:0,160,2510	0/0:23,0:23:69.24:0,69,1099	0/0:14,0:14:42.14:0,42,672	0/0:23,0:23:69.20:0,69,1050	0/0:10,0:10:30.10:0,30,479
chr10	15444032	.	AATAC	A	5813.18	PASS	AC=34;AF=0.680;AN=50;BaseQRankSum=10.415;DP=622;FS=0.529;HRun=0;HaplotypeScore=122.0720;InbreedingCoeff=0.9141;MQ=62.84;MQ0=4;MQRankSum=-2.468;QD=14.28;ReadPosRankSum=-1.993;VQSLOD=3.8055;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:35:8.60:66,9,0	0/0:9,0:9:18.06:0,18,417	./.	./.	1/1:7,12:20:33.07:475,33,0	1/1:7,19:26:45.15:683,45,0	1/1:18,4:22:3.01:46,3,0	./.	0/0:18,0:18:24.08:0,24,547	0/0:25,0:25:36.12:0,36,830	0/0:13,0:13:18.06:0,18,417	1/1:15,0:23:15.01:137,15,0	1/1:12,1:25:33.04:322,33,0	1/1:13,2:21:21.52:267,22,0	1/1:13,0:21:15.01:137,15,0	1/1:7,0:20:27.66:234,28,0	0/0:24,0:24:27.09:0,27,622	1/1:13,0:15:6.01:56,6,0	1/1:14,9:21:27.08:388,27,0	1/1:15,16:31:48.12:697,48,0	1/1:18,26:44:57.19:865,57,0	1/1:5,9:14:27.09:409,27,0	1/1:6,0:12:17.10:128,17,0	1/1:17,0:24:8.97:84,9,0	1/1:10,20:30:54.18:819,54,0	0/0:25,0:24:39.13:0,39,891	0/0:23,0:23:36.12:0,36,780	0/0:11,0:11:12.04:0,12,277
chr10	15446496	.	TA	T	1039.10	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=7.222;DP=379;FS=4.869;HRun=9;HaplotypeScore=32.5659;InbreedingCoeff=0.7949;MQ=57.67;MQ0=9;MQRankSum=1.837;QD=18.89;ReadPosRankSum=-0.128;VQSLOD=3.0472;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:60.15:0,60,679	0/0:3,0:3:9.03:0,9,104	0/0:4,0:1:3.01:0,3,35	0/0:10,0:7:14.71:0,15,149	0/0:17,0:17:48.14:0,48,554	0/0:20,0:19:42.12:0,42,485	0/0:15,0:15:39.12:0,39,448	0/0:30,0:24:69.19:0,69,779	0/0:5,0:5:15.04:0,15,173	0/0:21,0:21:51.15:0,51,588	0/0:15,0:15:45.13:0,45,517	0/0:10,0:10:4.04:0,4,212	0/0:7,0:7:12.03:0,12,137	0/0:6,0:6:15.04:0,15,173	0/0:8,0:8:24.03:0,24,262	0/0:16,0:16:42.10:0,42,465	0/0:20,0:20:51.11:0,51,567	0/0:21,0:21:57.13:0,57,643	1/1:4,16:16:39.02:357,39,0	1/1:0,20:20:54.03:494,54,0	1/1:2,13:14:36.01:329,36,0	0/0:2,0:2:6.02:0,6,69	0/0:3,0:3:6.02:0,6,69	0/0:7,0:7:18.04:0,18,199	0/0:11,0:11:33.10:0,33,381	0/0:20,0:20:54.12:0,54,602	0/0:16,0:16:39.12:0,39,449	0/0:10,0:10:27.04:0,27,297
chr10	15448850	.	G	GCAT	12424.69	PASS	AB=0.605;AC=51;AF=0.981;AN=52;BaseQRankSum=-2.178;DP=713;FS=0.000;HRun=0;HaplotypeScore=93.5283;InbreedingCoeff=-0.0337;MQ=42.83;MQ0=126;MQRankSum=-0.255;QD=18.57;ReadPosRankSum=1.160;VQSLOD=4.6636;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,31:32:27.09:498,27,0	1/1:0,4:4:9.03:154,9,0	./.	./.	0/1:9,15:17:9.58:407,0,10	1/1:4,9:11:15.05:308,15,0	1/1:8,20:23:12.04:246,12,0	1/1:19,12:13:21.03:273,21,0	1/1:13,26:36:39.13:800,39,0	1/1:8,18:22:51.17:951,51,0	1/1:5,11:14:18.06:363,18,0	1/1:7,13:20:21.06:426,21,0	1/1:8,25:31:36.12:738,36,0	1/1:5,27:28:24.08:492,24,0	1/1:5,22:23:15.05:307,15,0	1/1:6,25:29:33.11:677,33,0	1/1:6,19:22:24.08:468,24,0	1/1:7,29:33:47.56:894,48,0	1/1:5,15:18:45.15:794,45,0	1/1:2,16:19:27.09:554,27,0	1/1:10,26:31:14.74:302,15,0	1/1:7,13:19:12.04:246,12,0	1/1:1,13:11:15.05:308,15,0	1/1:6,38:35:32.98:553,33,0	1/1:5,15:12:12.04:246,12,0	1/1:7,15:18:45.14:867,45,0	1/1:9,20:24:24.08:492,24,0	1/1:1,8:6:3.01:62,3,0
chr10	15449152	.	AAAAC	A	7288.97	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=2.085;DP=630;FS=0.000;HRun=0;HaplotypeScore=124.4851;InbreedingCoeff=0.9956;MQ=61.54;MQ0=0;MQRankSum=1.126;QD=28.92;ReadPosRankSum=4.098;VQSLOD=4.4238;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,25:29:66.23:1074,66,0	0/0:9,0:9:18.06:0,18,438	0/0:36,0:32:24.08:0,24,584	0/0:24,0:21:15.52:0,16,334	0/0:14,0:30:69.24:0,69,1268	0/0:10,0:34:81.28:0,81,1406	0/0:11,0:28:48.16:0,48,853	0/0:30,0:30:51.17:0,51,1236	0/0:20,0:20:45.11:0,45,1036	0/0:18,0:18:33.10:0,33,802	0/0:18,0:17:39.13:0,39,929	1/1:10,16:26:45.15:734,45,0	1/1:4,9:13:24.08:392,24,0	1/1:7,18:25:39.13:637,39,0	1/1:9,23:32:60.20:979,60,0	1/1:8,16:24:45.15:734,45,0	0/0:21,0:21:45.15:0,45,1089	1/1:6,14:20:29.76:489,30,0	0/0:13,0:24:48.16:0,48,915	0/0:9,0:20:42.14:0,42,748	0/0:3,0:15:36.12:0,36,651	1/1:8,12:20:24.08:392,24,0	1/1:3,18:21:34.84:585,35,0	1/1:4,18:22:45.15:735,45,0	1/1:6,14:20:33.11:539,33,0	0/0:20,0:20:36.11:0,36,806	0/0:17,0:17:45.15:0,45,1024	0/0:11,0:11:33.11:0,33,801
chr10	15450611	.	T	TC	530.47	PASS	AB=0.772;AC=10;AF=0.179;AN=56;BaseQRankSum=-0.095;DP=420;FS=23.061;HRun=9;HaplotypeScore=51.7056;InbreedingCoeff=0.6868;MQ=89.27;MQ0=0;MQRankSum=-1.715;QD=6.10;ReadPosRankSum=-2.106;VQSLOD=-0.3626;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:62.94:0,63,540	0/0:6,0:6:17.03:0,17,136	0/0:19,0:19:38.45:0,38,308	0/0:19,0:18:24.84:0,25,192	0/1:11,1:12:0.26:125,0,0	0/1:7,11:18:32.99:81,0,33	1/1:8,13:21:18.51:191,19,0	0/0:17,0:17:23.84:0,24,195	0/0:12,0:12:29.91:0,30,250	0/0:16,0:16:33.45:0,33,281	0/0:7,0:7:14.99:0,15,128	0/0:9,0:9:20.99:0,21,182	0/0:7,0:7:17.99:0,18,156	0/0:23,0:23:53.89:0,54,454	0/0:23,0:24:52.98:0,53,442	0/0:17,0:17:38.98:0,39,338	0/0:21,0:21:53.79:0,54,459	0/0:13,0:13:35.99:0,36,311	1/1:10,0:10:2.56:20,3,0	1/1:6,0:6:3.31:16,3,0	1/1:15,5:20:6.21:243,6,0	0/0:16,0:16:38.98:0,39,338	0/0:15,0:15:26.93:0,27,231	0/0:16,0:16:44.93:0,45,380	0/0:8,0:8:24:0,24,208	0/0:19,0:20:44.01:0,44,367	0/0:13,0:13:38.91:0,39,324	0/0:5,0:5:14.92:0,15,121
chr10	15452384	.	CCTCTGCCT	C	430.32	PASS	AB=0.636;AC=6;AF=0.111;AN=54;BaseQRankSum=4.903;DP=615;FS=14.795;HRun=0;HaplotypeScore=146.4831;InbreedingCoeff=0.4542;MQ=58.60;MQ0=19;MQRankSum=-5.134;QD=5.31;ReadPosRankSum=-0.808;VQSLOD=1.9204;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:30:45.15:0,45,1581	0/0:13,0:13:27.07:0,27,695	./.	0/0:23,0:17:6.01:0,6,71	0/0:6,3:8:0:0,0,0	1/1:8,11:17:12.04:265,12,0	1/1:12,14:23:6.02:151,6,0	0/0:19,0:18:3.01:0,3,67	0/0:27,0:26:42.14:0,42,1455	0/0:21,0:21:19.31:0,19,581	0/0:15,0:13:9.03:0,9,294	0/0:24,0:24:42.13:0,42,1480	0/0:26,0:26:51.18:0,51,1498	0/0:23,0:23:42.13:0,42,1457	0/0:26,0:26:39.13:0,39,1306	0/0:21,0:21:39.13:0,39,1483	0/0:31,0:31:48.19:0,48,2200	0/0:25,0:24:51.17:0,51,1867	0/1:15,0:22:40.90:41,0,106	0/1:2,0:12:78.04:96,0,78	0/0:40,0:38:12.02:0,12,129	0/0:16,0:16:27.09:0,27,1026	0/0:9,0:9:9.03:0,9,301	0/0:31,0:29:69.24:0,69,2451	0/0:24,0:23:30.57:0,31,969	0/0:29,0:27:45.15:0,45,1388	0/0:19,0:19:39.13:0,39,1241	0/0:4,0:4:6.02:0,6,237
chr10	15453284	.	TA	T	1570.13	PASS	AB=0.804;AC=14;AF=0.250;AN=56;BaseQRankSum=8.520;DP=408;FS=1.582;HRun=11;HaplotypeScore=42.6736;InbreedingCoeff=0.7635;MQ=73.07;MQ0=0;MQRankSum=-0.935;QD=16.36;ReadPosRankSum=1.456;VQSLOD=4.1463;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:81.11:0,81,841	0/1:5,1:6:9.61:10,0,113	0/0:13,0:11:11.36:0,11,86	0/0:12,0:10:11.36:0,11,91	1/1:4,25:29:71.74:577,72,0	1/1:1,22:23:56.84:460,57,0	1/1:1,4:5:8.99:74,9,0	0/0:18,0:18:16.15:0,16,342	0/0:9,0:9:24.03:0,24,241	0/0:18,0:18:51.12:0,51,538	0/0:19,0:19:53.48:0,53,538	0/0:9,0:9:27.07:0,27,288	0/0:14,0:14:33.06:0,33,338	0/0:9,0:9:21:0,21,211	0/0:13,0:13:36.08:0,36,376	0/0:5,0:5:15.04:0,15,160	0/0:37,0:37:99:0,99,1045	0/0:20,0:20:49.30:0,49,486	1/1:2,13:15:38.94:318,39,0	1/1:2,10:13:32:252,32,0	1/1:0,2:2:5.99:49,6,0	0/0:5,0:5:12.03:0,12,128	0/0:10,0:10:24.05:0,24,248	0/1:2,1:3:15.62:16,0,55	0/0:16,0:15:48.10:0,48,498	0/0:27,0:27:72.17:0,72,762	0/0:22,0:22:63.15:0,63,662	0/0:7,0:7:21:0,21,199
chr10	15455045	.	T	TACACACAC	1547.38	PASS	AB=0.906;AC=24;AF=0.462;AN=52;BaseQRankSum=-2.651;DP=675;FS=4.107;HRun=0;HaplotypeScore=176.0786;InbreedingCoeff=0.5599;MQ=56.91;MQ0=32;MQRankSum=-3.634;QD=5.32;ReadPosRankSum=-1.925;VQSLOD=2.5304;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:23:9.03:226,9,0	0/1:7,0:8:7.71:8,0,23	./.	./.	0/0:13,0:21:8.54:0,9,106	0/0:7,0:16:4.88:0,5,184	0/0:20,0:26:17.69:0,18,298	0/1:24,0:22:0.52:16,0,1	0/0:14,0:24:19.68:0,20,169	0/1:16,0:24:4.65:5,0,109	0/0:12,0:17:11.82:0,12,137	1/1:14,0:18:5.95:141,6,0	1/1:9,0:11:6.02:171,6,0	1/1:17,0:17:2.16:60,2,0	1/1:18,0:24:4.26:99,4,0	1/1:16,7:23:5.05:118,5,0	0/0:16,0:27:41.09:0,41,507	1/1:17,0:21:15.05:516,15,0	0/0:14,0:15:2.14:0,2,54	0/0:11,0:19:9.03:0,9,164	0/0:19,0:30:12.04:0,12,214	1/1:24,0:22:3.01:88,3,0	0/1:19,0:19:0.05:0,0,0	1/1:29,0:29:14.72:243,15,0	1/1:13,1:21:3.88:27,4,0	0/0:16,0:22:16.64:0,17,194	0/0:20,0:29:18.40:0,18,245	0/0:9,0:12:11.82:0,12,181
chr10	15458839	.	A	AT	6975.35	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-14.566;DP=841;FS=7.003;HRun=0;HaplotypeScore=85.8416;InbreedingCoeff=0.9995;MQ=82.82;MQ0=0;MQRankSum=-0.182;QD=42.53;ReadPosRankSum=0.338;VQSLOD=5.1138;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,160,2206	0/0:8,0:8:24.05:0,24,311	0/0:26,0:26:74.45:0,74,987	0/0:26,0:26:74.84:0,75,970	1/1:1,20:21:54.18:862,54,0	1/1:1,16:17:39.13:623,39,0	1/1:0,32:32:96.33:1534,96,0	0/0:37,0:36:99:0,105,1454	0/0:33,0:33:96.31:0,96,1323	0/0:43,0:43:99:0,120,1664	0/0:24,0:24:72.23:0,72,989	0/0:43,0:43:99:0,123,1702	0/0:42,0:42:99:0,126,1761	0/0:35,0:35:99:0,99,1364	0/0:35,0:35:99:0,105,1416	0/0:37,0:37:99:0,105,1450	0/0:26,0:26:75.25:0,75,1049	0/0:34,0:34:96.32:0,96,1341	1/1:0,22:22:66.21:1031,66,0	1/1:0,25:25:57.19:911,57,0	1/1:0,47:47:99:2014,126,0	0/0:29,0:29:81.26:0,81,1115	0/0:18,0:18:54.18:0,54,755	0/0:40,0:40:99:0,102,1408	0/0:23,0:23:66.21:0,66,906	0/0:35,0:35:99:0,102,1408	0/0:18,0:18:51.16:0,51,694	0/0:10,0:10:30.10:0,30,420
chr10	15458947	.	TACAC	T	2618.32	PASS	AB=0.867;AC=21;AF=0.389;AN=54;BaseQRankSum=-0.718;DP=843;FS=4.448;HRun=0;HaplotypeScore=168.8257;InbreedingCoeff=0.6512;MQ=54.62;MQ0=31;MQRankSum=2.648;QD=8.37;ReadPosRankSum=0.495;VQSLOD=2.9928;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:22.29:0,22,343	1/1:9,3:13:12.03:170,12,0	./.	0/0:38,0:20:2.92:0,3,24	0/1:14,1:19:62.05:69,0,62	0/0:10,0:12:11.24:0,11,76	0/1:23,1:28:24.67:25,0,63	1/1:23,2:23:6.02:94,6,0	1/1:21,14:36:42.13:643,42,0	1/1:29,10:40:25.41:417,25,0	1/1:8,10:20:21.83:309,22,0	0/0:23,0:39:6.18:0,6,115	0/0:17,0:35:11.96:0,12,146	0/0:29,1:35:56.07:0,56,1086	0/0:29,0:47:24.06:0,24,405	0/0:25,0:43:15.13:0,15,235	1/1:18,13:32:15.07:367,15,0	0/0:19,0:21:27.05:0,27,437	0/0:12,0:9:12.04:0,12,221	0/0:30,0:29:31.18:0,31,437	0/1:40,0:37:15.03:15,0,156	0/0:20,0:37:10.62:0,11,198	0/0:19,0:31:4.89:0,5,103	0/0:26,0:49:17.92:0,18,295	0/0:25,0:32:21.39:0,21,367	1/1:22,5:28:14.40:180,14,0	1/1:9,10:22:27.08:387,27,0	1/1:3,4:7:9.03:142,9,0
chr10	15459037	.	TACACACAC	T	345.72	PASS	AB=0.755;AC=5;AF=0.089;AN=56;BaseQRankSum=7.798;DP=783;FS=2.650;HRun=0;HaplotypeScore=195.4395;InbreedingCoeff=0.2642;MQ=53.09;MQ0=48;MQRankSum=-6.050;QD=3.20;ReadPosRankSum=-3.134;VQSLOD=2.3804;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:24:45.15:0,45,1404	0/0:10,0:9:18.06:0,18,712	0/0:45,0:4:12.03:0,12,323	0/0:35,0:2:3.01:0,3,50	0/0:22,0:23:51.18:0,51,1977	0/0:18,0:17:36.12:0,36,1463	0/1:39,3:41:99:213,0,3474	0/0:32,0:23:66.23:0,66,2576	0/0:32,0:32:78.27:0,78,3107	0/0:38,0:37:96.33:0,96,3350	0/0:14,0:15:33.11:0,33,1250	0/0:35,0:34:80.50:0,81,3196	0/0:39,0:39:99:0,108,4274	0/0:27,0:27:57.18:0,57,2211	0/0:31,0:31:84.26:0,84,3237	0/0:39,0:39:88.55:0,89,3491	0/0:27,0:27:66.21:0,66,2661	0/0:28,0:28:78.23:0,78,2935	0/1:7,0:15:73.73:94,0,74	1/1:2,0:4:8.67:47,9,0	0/1:26,15:37:25.23:108,0,25	0/0:16,0:15:33.07:0,33,1120	0/0:18,0:18:42.14:0,42,1636	0/0:41,0:41:99:0,99,3834	0/0:29,0:29:67.48:0,67,2611	0/0:36,0:34:90.31:0,90,3314	0/0:24,0:23:45.14:0,45,1629	0/0:10,0:10:27.09:0,27,1054
chr10	15459112	.	TACACAC	T	1707.17	PASS	AB=0.690;AC=9;AF=0.161;AN=56;BaseQRankSum=11.274;DP=871;FS=1.507;HRun=0;HaplotypeScore=203.2073;InbreedingCoeff=0.5661;MQ=48.10;MQ0=62;MQRankSum=-6.843;QD=8.58;ReadPosRankSum=1.045;VQSLOD=2.8609;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:42:93.28:0,93,3031	0/0:10,0:9:21.07:0,21,706	0/0:39,0:4:10.68:0,11,166	0/0:39,0:4:5.73:0,6,95	0/1:14,18:30:80.60:183,0,81	0/1:9,13:16:36:675,0,36	1/1:11,16:21:15.05:325,15,0	0/0:24,0:21:57.19:0,57,1659	0/0:46,0:43:99:0,111,3503	0/0:29,0:24:57.20:0,57,1735	0/0:17,0:16:36.12:0,36,1101	0/0:35,0:35:78.27:0,78,2405	0/0:40,0:39:99:0,99,3172	0/0:31,0:28:60.20:0,60,1979	0/0:39,0:38:75.24:0,75,2187	0/0:30,0:31:69.24:0,69,2019	0/0:25,0:23:54.19:0,54,1678	0/0:34,0:34:78.25:0,78,2396	0/1:12,4:11:99:172,0,143	1/1:5,16:25:18.22:334,18,0	1/1:28,4:64:21.85:174,22,0	0/0:17,0:16:45.15:0,45,1471	0/0:17,0:15:36.12:0,36,1182	0/0:57,0:58:99:0,151,4754	0/0:21,0:18:48.16:0,48,1377	0/0:29,0:29:75.26:0,75,2110	0/0:16,0:17:43.03:0,43,1284	0/0:15,0:15:39.13:0,39,1270
chr10	15459185	.	T	TAC	2264.59	PASS	AB=0.876;AC=7;AF=0.125;AN=56;BaseQRankSum=-7.969;DP=939;FS=11.772;HRun=0;HaplotypeScore=155.3269;InbreedingCoeff=0.1601;MQ=51.03;MQ0=51;MQRankSum=1.784;QD=9.56;ReadPosRankSum=-1.915;VQSLOD=2.5220;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:52,1:56:57.64:0,58,1058	0/0:8,0:11:29.75:0,30,308	0/0:43,0:16:40.69:0,41,366	0/1:33,0:8:5.29:5,0,136	0/0:10,0:23:31.54:0,32,154	0/0:4,0:17:34.09:0,34,168	0/0:13,0:20:34.09:0,34,168	0/0:33,1:33:3.69:0,4,461	0/0:33,0:36:77.68:0,78,814	0/0:45,0:36:72:0,72,803	0/0:21,0:21:47.94:0,48,510	0/0:40,0:39:96.06:0,96,1074	0/0:46,0:44:90.24:0,90,1029	0/0:27,1:28:13.08:0,13,668	0/0:30,1:30:15.97:0,16,628	0/0:30,0:30:62.78:0,63,658	0/0:23,0:25:56.81:0,57,610	0/0:25,0:28:44.47:0,44,522	0/1:19,8:19:65.82:418,0,66	1/1:21,11:32:45.11:639,45,0	0/1:51,39:83:19.83:1300,0,20	0/0:32,0:29:53.95:0,54,580	0/1:16,1:14:13.91:14,0,317	0/0:45,0:45:96.06:0,96,1065	0/0:23,0:23:56.94:0,57,610	0/0:34,0:30:68.22:0,68,767	0/1:32,1:35:19.30:19,0,635	0/0:8,0:7:3.01:0,3,35
chr10	15462564	.	AG	A	2892.42	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=8.775;DP=554;FS=6.207;HRun=9;HaplotypeScore=56.6822;InbreedingCoeff=0.8431;MQ=78.83;MQ0=0;MQRankSum=-3.066;QD=19.54;ReadPosRankSum=1.040;VQSLOD=4.1456;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:90.24:0,90,1020	0/0:7,0:7:12.01:0,12,120	0/0:23,0:23:47.80:0,48,476	0/1:6,0:6:12.08:12,0,118	1/1:2,18:20:48.01:440,48,0	1/1:3,14:17:42.02:384,42,0	1/1:3,21:24:57.03:522,57,0	0/0:16,0:16:30.08:0,30,337	0/0:11,1:12:5.62:0,6,308	0/0:12,0:12:21.06:0,21,242	0/0:13,0:13:36.08:0,36,392	0/0:19,0:19:51.13:0,51,579	0/0:16,0:16:36.11:0,36,414	0/0:25,0:25:63.19:0,63,725	0/0:22,0:22:48.13:0,48,545	0/0:13,0:14:35.17:0,35,442	0/0:40,1:41:71.81:0,72,1063	0/0:39,2:41:56.39:0,56,1155	1/1:10,15:25:16.55:404,17,0	1/1:1,17:18:48.02:439,48,0	1/1:6,32:38:96.04:879,96,0	0/0:21,0:21:54.11:0,54,598	0/0:15,0:15:42.11:0,42,473	0/0:18,0:18:48.14:0,48,554	0/0:8,0:8:21.06:0,21,242	0/0:14,0:14:42.12:0,42,483	0/0:23,0:22:66.18:0,66,752	0/0:11,1:12:2.53:0,3,238
chr10	15466294	.	AC	A	2697.56	PASS	AB=0.965;AC=28;AF=0.500;AN=56;BaseQRankSum=-2.590;DP=500;FS=25.619;HRun=11;HaplotypeScore=66.4238;InbreedingCoeff=0.6176;MQ=74.74;MQ0=0;MQRankSum=0.124;QD=8.56;ReadPosRankSum=2.446;VQSLOD=0.5687;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:34:23.01:0,23,135	1/1:2,3:5:5.95:44,6,0	0/1:16,1:14:3.36:3,0,90	0/1:12,0:11:27.46:27,0,71	0/0:13,0:13:9.01:0,9,89	0/0:5,0:5:3.01:0,3,32	0/1:28,1:29:38.31:38,0,417	1/1:20,13:35:1.96:198,2,0	1/1:2,9:13:14.01:104,14,0	1/1:4,9:14:23.92:193,24,0	1/1:3,3:6:8.98:74,9,0	0/0:13,0:22:26.41:0,26,192	0/0:5,0:14:14.39:0,14,81	0/0:8,0:10:18.16:0,18,142	0/0:3,0:13:14.31:0,14,89	0/0:5,0:10:5.68:0,6,29	1/1:7,21:31:66.02:509,66,0	0/0:4,0:20:34.52:0,35,201	1/1:6,15:22:29.38:372,29,0	1/1:4,8:12:17.96:148,18,0	1/1:18,23:42:62.37:500,62,0	0/1:15,1:17:6.91:7,0,99	0/0:4,0:12:14.40:0,14,89	0/0:11,0:21:41.41:0,41,304	0/0:8,0:11:11.86:0,12,110	1/1:7,13:21:40.79:322,41,0	1/1:6,18:23:6.95:264,7,0	1/1:6,7:13:11.96:98,12,0
chr10	15470839	.	C	CA	2824.30	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-3.993;DP=568;FS=10.928;HRun=1;HaplotypeScore=62.1706;InbreedingCoeff=0.9920;MQ=76.44;MQ0=0;MQRankSum=0.944;QD=37.16;ReadPosRankSum=-1.259;VQSLOD=2.6463;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,153,1929	0/0:5,0:5:15.05:0,15,194	0/0:12,0:12:30.03:0,30,361	0/0:13,0:13:20.01:0,20,336	0/0:20,0:20:57.19:0,57,739	0/0:18,0:18:45.15:0,45,584	0/0:19,0:19:51.14:0,51,646	0/0:15,0:15:39.13:0,39,506	0/0:19,0:19:54.16:0,54,687	0/0:19,0:19:51.17:0,51,662	0/0:12,0:12:33.11:0,33,427	0/0:25,0:25:75.24:0,75,974	0/0:24,0:24:69.22:0,69,892	0/0:25,0:25:69.22:0,69,896	0/0:23,0:23:69.22:0,69,894	0/0:16,0:16:48.16:0,48,623	0/0:27,0:27:78.25:0,78,1012	0/0:14,0:14:42.14:0,42,545	1/1:0,16:16:45.13:631,45,0	1/1:0,15:15:36.12:538,36,0	1/1:1,44:45:99:1798,120,0	0/0:22,0:22:60.20:0,60,778	0/0:19,0:19:51.17:0,51,661	0/0:33,0:33:96.30:0,96,1231	0/0:14,0:14:42.14:0,42,542	0/0:20,0:20:57.17:0,57,726	0/0:14,0:14:39.13:0,39,502	0/0:10,0:10:30.10:0,30,389
chr10	15471164	.	A	AC	3572.44	PASS	AB=0.721;AC=36;AF=0.643;AN=56;BaseQRankSum=-3.261;DP=438;FS=0.000;HRun=10;HaplotypeScore=108.7382;InbreedingCoeff=0.2346;MQ=53.22;MQ0=0;MQRankSum=-1.041;QD=9.55;ReadPosRankSum=1.227;VQSLOD=2.5505;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:16,11:27:3.65:146,0,4	1/1:5,5:10:6.02:64,6,0	0/0:20,0:21:32.01:0,32,233	0/0:5,0:5:0.66:0,1,21	0/0:13,0:13:14.91:0,15,117	0/0:9,0:10:10.90:0,11,69	0/0:15,0:15:20.94:0,21,172	1/1:15,10:25:22.56:224,23,0	1/1:4,14:18:11.48:326,11,0	1/1:10,9:19:21.05:222,21,0	0/1:6,9:15:1.16:155,0,1	1/1:6,12:18:14.96:135,15,0	1/1:5,11:16:27.07:287,27,0	0/1:8,6:14:34.17:81,0,34	0/1:7,10:17:5.70:143,0,6	1/1:3,15:18:39.10:416,39,0	0/1:8,7:15:49.82:136,0,50	1/1:6,6:12:15:148,15,0	1/1:13,0:13:14.55:96,15,0	0/1:7,0:7:0.02:0,0,0	1/1:19,0:19:2.88:15,3,0	1/1:3,11:14:18:179,18,0	1/1:8,15:23:20.95:218,21,0	0/1:14,10:24:43.87:181,0,44	0/1:8,6:14:12.59:84,0,13	0/1:12,6:19:13.46:110,0,13	1/1:4,6:10:12.03:128,12,0	0/1:4,3:7:34.23:81,0,34
chr10	15471721	.	GACAC	G	2123.09	PASS	AB=0.847;AC=34;AF=0.708;AN=48;BaseQRankSum=-2.146;DP=498;FS=5.747;HRun=0;HaplotypeScore=85.6511;InbreedingCoeff=0.1674;MQ=67.39;MQ0=3;MQRankSum=0.977;QD=5.96;ReadPosRankSum=0.411;VQSLOD=1.1833;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:31,1:33:14.71:171,15,0	./.	./.	./.	0/0:12,0:14:6.21:0,6,37	0/1:11,0:11:12.74:20,0,13	0/1:19,1:26:32.06:32,0,45	0/0:12,0:12:0:0,0,0	1/1:19,2:22:6.01:74,6,0	./.	1/1:9,3:12:3.01:46,3,0	0/1:12,2:17:21.58:158,0,22	1/1:5,5:10:15.01:205,15,0	1/1:7,3:12:11.61:131,12,0	1/1:7,10:17:24.08:370,24,0	1/1:10,4:14:8.99:113,9,0	1/1:15,7:23:24.26:352,24,0	1/1:18,7:25:12.04:185,12,0	0/0:18,0:19:5.59:0,6,26	0/0:12,0:14:5.49:0,5,24	0/1:33,5:38:32.49:32,0,53	0/1:10,0:11:0:0,0,0	1/1:11,1:12:3.01:46,3,0	0/1:13,7:20:10.93:84,0,11	1/1:11,5:15:3.01:46,3,0	1/1:15,0:15:3.47:28,3,0	1/1:13,1:15:9.02:119,9,0	1/1:5,1:6:3.01:46,3,0
chr10	15473324	.	A	ATTTT	2015.39	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=-1.459;DP=488;FS=6.890;HRun=12;HaplotypeScore=90.3166;InbreedingCoeff=0.7708;MQ=70.53;MQ0=3;MQRankSum=-0.804;QD=26.52;ReadPosRankSum=-3.761;VQSLOD=1.5947;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:32:59.83:0,60,788	0/0:6,0:6:5.94:0,6,79	0/0:19,0:12:17.45:0,17,183	0/1:10,0:8:18.29:18,0,130	1/1:16,16:37:73.59:1175,74,0	1/1:2,9:15:21.07:414,21,0	1/1:3,10:14:28.91:556,29,0	0/0:32,0:33:57.95:0,58,719	0/0:12,0:12:26.97:0,27,355	0/0:20,0:21:44.94:0,45,576	0/0:18,0:19:48.01:0,48,581	0/0:20,0:21:46.99:0,47,598	0/0:13,0:13:23.94:0,24,315	0/0:18,0:18:44.98:0,45,575	0/0:9,0:9:20.99:0,21,273	0/0:10,0:10:20.96:0,21,276	0/0:23,0:23:7.81:0,8,597	0/0:19,0:19:45.05:0,45,592	0/0:18,0:17:41.24:0,41,282	0/0:9,0:9:23.67:0,24,158	0/0:13,0:13:20.72:0,21,141	0/0:16,0:18:48.09:0,48,599	0/0:20,0:20:32.86:0,33,434	0/0:18,0:18:44.66:0,45,574	0/0:14,0:15:25.48:0,25,481	0/0:20,0:20:38.91:0,39,493	0/0:20,0:20:44.90:0,45,534	0/0:4,0:6:10.18:0,10,101
chr10	15473333	.	T	TA	980.75	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=6.335;DP=480;FS=9.938;HRun=0;HaplotypeScore=61.4557;InbreedingCoeff=0.9772;MQ=68.91;MQ0=3;MQRankSum=1.529;QD=23.35;ReadPosRankSum=1.443;VQSLOD=4.4384;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:95.80:0,96,1127	0/0:7,0:7:15.02:0,15,162	0/0:19,0:11:20.52:0,21,171	0/0:9,0:7:12.24:0,12,154	0/0:30,0:30:66.58:0,67,432	0/0:16,0:16:29.10:0,29,184	0/0:13,0:13:31.65:0,32,185	0/0:26,0:26:68.95:0,69,881	0/0:11,0:11:33.07:0,33,421	0/0:19,0:19:57.10:0,57,710	0/0:20,0:20:60.11:0,60,749	0/0:21,0:21:61.05:0,61,760	0/0:10,0:10:30.07:0,30,383	0/0:20,0:20:60.15:0,60,754	0/0:10,0:10:27.06:0,27,343	0/0:11,0:11:33.07:0,33,398	0/0:22,0:22:60.16:0,60,780	0/0:20,0:20:54.12:0,54,696	1/1:1,19:19:50.96:581,51,0	1/1:1,10:11:24.07:284,24,0	1/1:2,9:11:20.90:257,21,0	0/0:21,0:21:60.06:0,60,730	0/0:16,0:16:45.11:0,45,563	0/0:20,0:20:60.08:0,60,748	0/0:18,0:18:50.63:0,51,631	0/0:16,0:16:48.14:0,48,618	0/0:21,0:21:63.04:0,63,731	0/0:9,0:9:19.72:0,20,227
chr10	15473825	.	TC	T	982.62	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=7.652;DP=620;FS=8.643;HRun=7;HaplotypeScore=71.3966;InbreedingCoeff=0.9947;MQ=71.54;MQ0=1;MQRankSum=-2.509;QD=23.40;ReadPosRankSum=-1.224;VQSLOD=3.1438;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:78.23:0,78,965	0/0:9,0:9:27.08:0,27,328	0/0:32,0:27:47.90:0,48,681	0/0:30,0:19:19.91:0,20,296	0/0:28,0:28:81.25:0,81,1009	0/0:35,0:35:96.29:0,96,1183	0/0:25,0:25:63.20:0,63,791	0/0:18,0:19:48.11:0,48,586	0/0:16,0:16:48.15:0,48,604	0/0:31,0:31:75.24:0,75,941	0/0:14,0:14:36.12:0,36,452	0/0:15,0:15:36.12:0,36,453	0/0:29,0:29:84.26:0,84,1043	0/0:19,0:19:54.17:0,54,679	0/0:18,0:18:54.16:0,54,667	0/0:21,0:21:54.17:0,54,679	0/0:25,0:25:57.16:0,57,698	0/0:17,0:17:42.12:0,42,515	1/1:3,14:17:51.10:513,51,0	1/1:0,16:16:39.08:397,39,0	1/1:1,8:9:21.05:214,21,0	0/0:20,0:20:57.17:0,57,703	0/0:18,0:18:51.16:0,51,641	0/0:32,0:32:81.22:0,81,996	0/0:23,0:23:66.21:0,66,828	0/0:27,0:27:75.23:0,75,932	0/0:36,0:35:96.31:0,96,1205	0/0:7,0:7:21.05:0,21,250
chr10	15473840	.	C	CACAAA	2214.21	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=8.896;DP=659;FS=2.109;HRun=0;HaplotypeScore=127.5101;InbreedingCoeff=0.8216;MQ=70.28;MQ0=1;MQRankSum=-7.040;QD=31.19;ReadPosRankSum=-2.706;VQSLOD=2.7271;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:69.22:0,69,1246	0/0:8,0:8:15.05:0,15,268	0/0:40,0:29:27.98:0,28,512	0/0:44,0:23:37.66:0,38,470	0/0:29,0:29:60.21:0,60,1118	0/0:35,0:35:87.30:0,87,1578	0/0:26,0:26:66.20:0,66,1165	0/1:21,0:21:15.63:16,0,416	0/0:16,0:16:33.11:0,33,581	0/0:28,0:28:60.19:0,60,1070	0/0:15,0:15:33.10:0,33,584	0/0:18,0:18:42.14:0,42,791	0/0:26,0:26:57.20:0,57,1058	0/0:19,0:19:30.10:0,30,565	0/0:20,0:20:42.10:0,42,711	0/0:20,0:20:45.15:0,45,841	0/0:22,0:22:32.22:0,32,971	0/0:23,0:23:42.09:0,42,704	1/1:10,9:19:39.09:940,39,0	1/1:9,10:19:48.15:1098,48,0	1/1:10,2:12:15.05:307,15,0	0/0:20,0:20:48.16:0,48,872	0/0:21,0:21:48.15:0,48,872	0/0:30,0:30:75:0,75,1446	0/0:23,0:23:55.03:0,55,1055	0/0:29,0:29:57.18:0,57,1014	0/0:37,0:36:93.30:0,93,1638	0/0:6,0:6:12.04:0,12,226
chr10	15473864	.	C	CA	1241.20	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=4.639;DP=727;FS=0.000;HRun=8;HaplotypeScore=81.3874;InbreedingCoeff=0.8379;MQ=65.38;MQ0=7;MQRankSum=-3.555;QD=12.93;ReadPosRankSum=-1.298;VQSLOD=3.0634;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,99,893	0/0:9,0:9:24.01:0,24,219	0/1:40,0:23:3.50:4,0,186	0/0:47,0:26:5.76:0,6,171	0/0:31,0:31:84.03:0,84,763	0/0:37,0:36:84.04:0,84,768	0/0:30,0:30:81.01:0,81,733	0/0:21,0:20:54:0,54,492	0/0:18,0:18:13.31:0,13,377	0/0:27,0:27:75.03:0,75,687	0/0:15,0:15:42.02:0,42,384	0/0:19,0:19:54.02:0,54,494	0/0:29,0:29:78.03:0,78,714	0/0:23,0:23:69.04:0,69,631	0/0:19,0:19:51.02:0,51,467	0/0:27,0:27:78.03:0,78,710	0/0:29,0:29:78.04:0,78,713	0/0:28,0:28:65.99:0,66,599	1/1:4,20:22:54.16:621,54,0	1/1:5,15:19:45.13:518,45,0	1/1:4,8:12:21.53:243,22,0	0/0:19,0:19:17.47:0,17,332	0/0:26,0:26:78.04:0,78,713	0/0:41,0:41:96.04:0,96,947	0/0:31,0:31:84.03:0,84,768	0/0:29,0:28:84.04:0,84,765	0/0:36,0:36:93.03:0,93,846	0/0:6,0:6:18.01:0,18,165
chr10	15475361	.	ATT	A	1537.79	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=11.283;DP=627;FS=7.360;HRun=12;HaplotypeScore=86.0776;InbreedingCoeff=0.9275;MQ=70.32;MQ0=4;MQRankSum=0.640;QD=11.39;ReadPosRankSum=3.848;VQSLOD=1.9975;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:46:99:0,118,1537	0/0:7,0:7:18.01:0,18,192	0/0:37,0:17:10.96:0,11,171	0/1:23,0:12:2.05:2,0,61	1/1:1,0:18:38.40:166,38,0	1/1:2,0:18:41.37:186,41,0	1/1:3,0:14:30.57:143,31,0	0/0:46,0:48:99:0,104,1403	0/0:20,0:20:48.14:0,48,687	0/0:23,0:24:55.97:0,56,737	0/0:16,0:16:28.87:0,29,324	0/0:19,0:21:59.62:0,60,727	0/0:23,0:23:60.13:0,60,818	0/0:16,0:18:44.11:0,44,575	0/0:22,0:23:69.13:0,69,935	0/0:13,0:14:38.59:0,39,489	0/0:21,0:22:65.60:0,66,825	0/0:20,0:20:41.87:0,42,528	1/1:7,15:22:44.98:441,45,0	1/1:4,9:14:25.50:299,25,0	1/1:4,22:26:48.09:488,48,0	0/0:15,0:21:50.57:0,51,602	0/0:16,0:18:48.14:0,48,677	0/0:24,0:29:68.77:0,69,948	0/0:20,0:23:51.14:0,51,701	0/0:25,0:26:69.16:0,69,867	0/0:24,0:24:66.13:0,66,835	0/0:12,0:12:30.07:0,30,404
chr10	15476072	.	A	ATT	1199.90	PASS	AB=0.795;AC=9;AF=0.161;AN=56;BaseQRankSum=8.085;DP=562;FS=5.018;HRun=13;HaplotypeScore=100.2426;InbreedingCoeff=0.6477;MQ=66.73;MQ0=3;MQRankSum=-3.014;QD=9.52;ReadPosRankSum=-3.313;VQSLOD=1.5711;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:27:41.05:0,41,427	0/0:8,0:8:14.92:0,15,126	0/0:11,0:11:8.12:0,8,46	0/0:8,0:9:6.72:0,7,52	1/1:10,6:19:23.59:222,24,0	1/1:14,10:28:41.67:442,42,0	1/1:10,14:24:41.99:483,42,0	0/0:28,0:31:42.97:0,43,435	0/0:18,0:18:26.78:0,27,233	0/0:19,0:21:16.90:0,17,318	0/0:13,0:13:23.97:0,24,211	0/0:12,0:11:17.87:0,18,158	0/0:14,0:15:14.58:0,15,160	0/0:19,0:21:28.93:0,29,278	0/0:22,0:22:41.52:0,42,343	0/0:18,0:17:26.87:0,27,282	0/0:29,0:31:59.43:0,59,558	0/0:27,0:27:59.76:0,60,510	0/1:8,0:15:1.28:107,0,1	0/1:17,0:20:10.02:46,0,10	0/1:14,0:17:14.98:58,0,15	0/0:21,0:22:35.56:0,36,301	0/0:22,0:23:37.42:0,37,375	0/0:31,0:32:74.26:0,74,631	0/0:15,0:15:20.78:0,21,185	0/0:25,0:26:37.35:0,37,385	0/0:21,0:22:38.52:0,39,328	0/0:8,0:8:23.94:0,24,203
chr10	15476248	.	AAAAC	A	2511.89	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=10.465;DP=719;FS=11.691;HRun=0;HaplotypeScore=108.2645;InbreedingCoeff=0.9581;MQ=57.70;MQ0=9;MQRankSum=3.464;QD=27.60;ReadPosRankSum=-0.586;VQSLOD=2.9322;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,114,2698	0/0:9,0:9:21.07:0,21,510	0/0:35,0:12:11.94:0,12,185	0/0:27,0:16:7.12:0,7,346	1/1:6,25:31:60.09:914,60,0	1/1:5,22:26:48.16:786,48,0	1/1:9,24:33:60.17:955,60,0	0/0:33,0:33:36.59:0,37,827	0/0:21,0:21:48.14:0,48,1115	0/0:28,0:28:54.18:0,54,1287	0/0:21,0:21:45.15:0,45,1089	0/0:16,0:16:42.14:0,42,1001	0/0:18,0:18:48.16:0,48,1165	0/0:32,0:32:72.25:0,72,1723	0/0:20,0:20:39.13:0,39,948	0/0:29,0:29:75.15:0,75,1561	0/0:25,0:25:57.19:0,57,1342	0/0:30,0:30:72.25:0,72,1654	0/0:21,0:20:54.17:0,54,1196	0/0:21,0:21:51.16:0,51,1188	0/0:33,0:33:78.72:0,79,1808	0/0:26,0:26:34.23:0,34,1163	0/0:24,0:24:48.16:0,48,1159	0/0:34,0:34:84.29:0,84,2012	0/0:17,0:17:33.11:0,33,802	0/0:26,0:26:51.18:0,51,1214	0/0:22,0:22:54.19:0,54,1277	0/0:15,0:15:42.14:0,42,1020
chr10	15478289	.	G	GGT	5054.66	PASS	AB=0.731;AC=26;AF=0.500;AN=52;BaseQRankSum=-8.046;DP=708;FS=0.570;HRun=0;HaplotypeScore=130.0831;InbreedingCoeff=-0.0267;MQ=67.16;MQ0=12;MQRankSum=5.044;QD=10.62;ReadPosRankSum=-2.033;VQSLOD=4.4527;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:21,10:33:6.84:214,7,0	1/1:6,3:9:5.87:90,6,0	./.	./.	0/0:7,0:14:3.99:0,4,15	0/0:20,0:28:11.36:0,11,56	0/0:13,0:24:18.86:0,19,88	0/0:22,0:22:2.84:0,3,14	0/1:17,10:28:41.63:387,0,42	1/1:24,6:31:18.04:242,18,0	0/1:8,8:16:23.92:81,0,24	1/1:15,0:26:29:233,29,0	0/1:13,3:16:50.39:120,0,50	0/1:13,6:19:62.28:325,0,62	0/1:14,13:29:53.87:410,0,54	0/1:17,16:35:61.82:515,0,62	0/1:21,15:38:99:337,0,102	0/1:18,12:30:92.86:365,0,93	0/0:10,0:18:25.57:0,26,126	0/0:10,0:15:11.36:0,11,56	0/0:28,0:37:5.41:0,5,28	0/1:9,7:18:20.91:123,0,21	1/1:7,6:13:12.04:180,12,0	0/1:40,10:51:85.60:590,0,86	1/1:8,8:16:12.04:180,12,0	0/1:18,6:25:8.30:269,0,8	0/1:23,10:33:5.85:327,0,6	1/1:5,0:6:6.45:65,6,0
chr10	15480886	.	G	GCCTCCAACAGCCT	6273.11	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=0.825;DP=683;FS=4.588;HRun=0;HaplotypeScore=244.7175;InbreedingCoeff=0.9589;MQ=81.45;MQ0=0;MQRankSum=-9.816;QD=69.70;ReadPosRankSum=-4.142;VQSLOD=3.7447;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:87.24:0,87,2647	0/0:12,0:12:27.08:0,27,728	0/0:19,0:19:33.11:0,33,732	0/0:25,0:25:30.50:0,30,965	1/1:4,6:10:7.27:176,7,0	1/1:11,2:15:21.07:906,21,0	1/1:27,8:38:54.18:2677,54,0	0/0:25,0:25:30.07:0,30,740	1/1:17,9:27:44.94:2514,45,0	0/0:28,0:28:42.12:0,42,1139	0/0:9,0:9:18.06:0,18,476	0/0:28,0:28:57.20:0,57,1865	0/0:18,0:18:42.12:0,42,1185	0/0:23,0:23:48.16:0,48,1556	0/0:22,0:22:45.15:0,45,1480	0/0:24,0:24:39.13:0,39,1310	0/0:38,0:38:90.27:0,90,3039	0/0:37,0:36:75.24:0,75,2491	0/0:16,0:16:21.07:0,21,644	0/0:8,0:8:18.06:0,18,428	0/0:95,0:95:99:0,175,5118	0/0:11,0:11:18.06:0,18,670	0/0:17,0:17:17.54:0,18,537	0/0:32,0:32:63.21:0,63,2038	0/0:16,0:16:15.05:0,15,428	0/0:17,0:17:33.07:0,33,918	0/0:22,0:22:48.15:0,48,1409	0/0:11,0:11:21.07:0,21,680
chr10	15482530	.	TA	T	3942.86	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=12.013;DP=533;FS=3.336;HRun=6;HaplotypeScore=50.9639;InbreedingCoeff=0.9839;MQ=62.21;MQ0=3;MQRankSum=2.354;QD=28.99;ReadPosRankSum=-0.050;VQSLOD=4.0714;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:93.28:0,93,1207	0/0:12,0:12:36.12:0,36,474	0/0:10,0:6:12.04:0,12,144	0/0:9,0:8:17.96:0,18,187	1/1:2,20:22:60.11:632,60,0	1/1:1,24:25:72.18:774,72,0	1/1:0,19:19:51.13:548,51,0	0/0:42,0:41:99:0,114,1499	0/0:17,0:17:45.10:0,45,559	0/0:23,0:23:63.16:0,63,799	0/0:16,0:16:45.13:0,45,577	0/0:20,0:20:54.18:0,54,709	0/0:18,0:18:48.15:0,48,618	0/0:6,0:6:18.06:0,18,236	0/0:20,0:20:54.16:0,54,695	0/0:7,0:7:15.04:0,15,184	0/0:24,0:24:66.18:0,66,850	0/0:25,0:25:66.18:0,66,836	1/1:1,25:26:69.15:732,69,0	1/1:2,20:22:60.15:645,60,0	1/1:2,20:22:57.14:612,57,0	0/0:9,0:9:27.09:0,27,355	0/0:20,0:20:54.18:0,54,709	0/0:18,0:18:51.10:0,51,622	0/0:21,0:21:60.20:0,60,789	0/0:17,0:16:45.13:0,45,567	0/0:21,0:21:63.20:0,63,829	0/0:8,0:8:15.05:0,15,197
chr10	15483178	.	A	AT	4127.50	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-12.068;DP=722;FS=0.396;HRun=2;HaplotypeScore=74.5634;InbreedingCoeff=0.9985;MQ=93.19;MQ0=0;MQRankSum=-3.799;QD=40.47;ReadPosRankSum=0.473;VQSLOD=3.7741;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,144,1784	0/0:19,0:19:57.18:0,57,706	0/0:27,0:27:78.21:0,78,933	0/0:35,0:35:74.93:0,75,952	0/0:18,0:18:54.17:0,54,666	0/0:27,0:27:72.22:0,72,893	0/0:34,0:34:96.28:0,96,1176	0/0:18,0:18:54.17:0,54,669	0/0:34,0:34:96.30:0,96,1190	0/0:23,0:23:66.21:0,66,818	0/0:15,0:15:45.14:0,45,550	0/0:26,0:26:75.22:0,75,917	0/0:25,0:25:72.23:0,72,892	0/0:26,0:26:75.22:0,75,915	0/0:28,0:28:84.26:0,84,1041	0/0:22,0:22:66.18:0,66,793	0/0:35,0:35:99:0,105,1301	0/0:23,0:23:66.21:0,66,818	1/1:0,20:19:60.20:863,60,0	1/1:3,16:19:48.16:684,48,0	1/1:1,62:63:99:2581,181,0	0/0:18,0:18:51.16:0,51,631	0/0:12,0:12:36.11:0,36,446	0/0:22,0:22:66.19:0,66,803	0/0:16,0:16:48.13:0,48,580	0/0:27,0:27:78.25:0,78,967	0/0:32,0:32:93.29:0,93,1152	0/0:7,0:7:21.07:0,21,260
chr10	15483573	.	AC	A	25897.26	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-0.972;DP=790;FS=8.926;HRun=3;HaplotypeScore=81.6674;InbreedingCoeff=0.9985;MQ=78.78;MQ0=0;MQRankSum=-10.254;QD=34.67;ReadPosRankSum=5.022;VQSLOD=4.9947;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,59:59:99:2045,166,0	1/1:1,8:9:24.07:297,24,0	0/0:18,0:17:42.14:0,42,601	0/0:25,0:25:69.21:0,69,947	1/1:0,17:17:45.14:558,45,0	1/1:0,18:18:54.17:669,54,0	1/1:2,30:32:87.27:1079,87,0	1/1:1,17:18:51.15:620,51,0	1/1:0,34:34:96.30:1190,96,0	1/1:0,30:30:90.27:1102,90,0	1/1:0,12:12:33.10:409,33,0	1/1:0,45:45:99:1600,129,0	1/1:2,35:37:99:1246,102,0	1/1:2,35:37:96.02:1189,96,0	1/1:1,42:43:99:1451,117,0	1/1:0,22:22:63.20:781,63,0	1/1:0,31:31:87.27:1079,87,0	1/1:1,27:28:81.25:1004,81,0	1/1:2,18:20:54.15:656,54,0	1/1:0,23:23:66.21:818,66,0	1/1:4,66:70:99:2306,187,0	1/1:0,22:22:63.20:781,63,0	1/1:1,15:16:42.13:520,42,0	1/1:0,46:46:99:1674,135,0	1/1:1,26:27:78.25:967,78,0	1/1:0,19:19:57.13:667,57,0	1/1:0,22:22:66.21:818,66,0	1/1:0,10:10:30.09:372,30,0
chr10	15483847	.	TG	T	2356.52	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=11.732;DP=646;FS=2.817;HRun=4;HaplotypeScore=71.0362;InbreedingCoeff=0.9904;MQ=74.39;MQ0=0;MQRankSum=-0.465;QD=30.60;ReadPosRankSum=-0.019;VQSLOD=3.7664;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,120,1676	0/0:5,0:5:15.05:0,15,209	0/0:10,0:10:30.07:0,30,389	0/0:26,0:26:74.97:0,75,938	0/0:26,0:26:78.26:0,78,1089	0/0:22,0:22:66.21:0,66,907	0/0:25,0:25:69.22:0,69,949	0/0:26,0:26:72.24:0,72,1008	0/0:25,0:25:72.24:0,72,1007	0/0:19,0:19:54.15:0,54,735	0/0:7,0:7:18.06:0,18,252	0/0:36,0:36:96.31:0,96,1328	0/0:12,0:12:33.11:0,33,460	0/0:27,0:27:81.27:0,81,1134	0/0:21,0:21:63.20:0,63,865	0/0:11,0:11:33.11:0,33,462	0/0:28,0:28:84.28:0,84,1176	0/0:36,0:36:99:0,102,1428	1/1:1,16:17:48.11:559,48,0	1/1:0,10:10:24.07:285,24,0	1/1:1,49:50:99:1656,138,0	0/0:24,0:24:72.22:0,72,975	0/0:19,0:19:57.13:0,57,758	0/0:26,0:26:78.26:0,78,1092	0/0:16,0:16:48.16:0,48,671	0/0:33,0:33:96.31:0,96,1329	0/0:29,0:28:81.22:0,81,1080	0/0:19,0:19:57.16:0,57,762
chr10	15484296	.	TTAAAGCACTTCCCAGG	T	37081.19	PASS	AB=0.941;AC=53;AF=0.981;AN=54;BaseQRankSum=-1.703;DP=550;FS=0.000;HRun=0;HaplotypeScore=276.7870;InbreedingCoeff=-0.0304;MQ=63.42;MQ0=0;MQRankSum=-2.164;QD=67.42;ReadPosRankSum=2.879;VQSLOD=4.1389;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,13:20:24.08:1017,24,0	1/1:3,6:9:15.05:652,15,0	1/1:17,0:17:12.02:133,12,0	0/1:15,1:15:69.62:216,0,70	1/1:5,14:19:39.05:1545,39,0	1/1:3,11:14:27.09:1231,27,0	1/1:5,17:22:33.11:1493,33,0	1/1:19,10:29:30.08:872,30,0	1/1:3,19:22:45.15:2052,45,0	1/1:8,14:22:42.12:1671,42,0	1/1:6,17:23:32.80:1151,33,0	1/1:4,27:31:57.20:2594,57,0	1/1:6,21:27:51.18:2288,51,0	1/1:4,19:23:33.11:1505,33,0	1/1:5,13:18:36.12:1519,36,0	1/1:5,18:23:48.16:2183,48,0	1/1:7,14:21:27.09:1228,27,0	1/1:3,3:6:6.02:274,6,0	1/1:9,8:17:24.03:768,24,0	1/1:2,12:14:33.11:1400,33,0	1/1:11,9:20:4.26:271,4,0	1/1:4,19:23:48.16:2116,48,0	1/1:6,15:21:36.12:1570,36,0	1/1:8,12:20:18.06:803,18,0	1/1:4,16:20:42.14:1903,42,0	1/1:8,20:28:57.17:2168,57,0	1/1:3,22:24:54.19:2458,54,0	./.
chr10	15485690	.	GCTGGGCTCC	G	612.68	PASS	AB=1.000;AC=24;AF=0.429;AN=56;BaseQRankSum=10.067;DP=470;FS=0.000;HRun=0;HaplotypeScore=235.7566;InbreedingCoeff=0.2150;MQ=73.41;MQ0=0;MQRankSum=-8.031;QD=2.37;ReadPosRankSum=-0.892;VQSLOD=2.4056;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:14.16:0,14,57	0/0:7,0:7:3.61:0,4,24	0/0:15,0:15:43.59:0,44,1500	0/0:12,0:13:36.08:0,36,1595	0/0:18,0:18:54.17:0,54,2501	0/0:18,0:18:54.19:0,54,2652	0/0:21,0:21:63.20:0,63,3028	1/1:16,2:18:19.24:150,19,0	0/1:10,0:10:4.14:4,0,26	0/1:11,0:12:10.39:43,0,10	1/1:7,0:7:0.65:30,1,0	0/1:14,0:14:11.32:23,0,11	0/1:20,0:20:18.25:48,0,18	0/1:13,0:13:21.07:21,0,32	0/1:24,0:23:27.12:39,0,27	0/0:20,0:20:5.24:0,5,26	0/1:17,0:17:3.78:4,0,67	1/1:8,0:8:8.92:54,9,0	0/0:15,0:15:45.13:0,45,2111	0/0:10,0:10:30.10:0,30,1519	0/0:39,0:39:99:0,117,5697	0/1:10,0:10:3.34:27,0,3	0/1:6,0:6:0.13:4,0,0	0/1:15,0:15:20.39:24,0,20	1/1:16,0:16:1.47:51,1,0	1/1:22,2:24:4.96:131,5,0	1/1:27,0:27:4.81:58,5,0	1/1:17,0:17:5.15:70,5,0
chr10	15485694	.	G	GA	6429.60	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=15.526;DP=427;FS=2.224;HRun=0;HaplotypeScore=138.9417;InbreedingCoeff=0.9662;MQ=71.60;MQ0=0;MQRankSum=-14.528;QD=22.72;ReadPosRankSum=2.686;VQSLOD=5.7492;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,30:30:65.70:565,66,0	1/1:1,6:7:14.96:121,15,0	0/0:11,0:11:10.62:0,11,382	0/0:12,0:12:33.11:0,33,461	0/0:16,0:16:48.16:0,48,670	0/0:19,0:19:54.17:0,54,739	0/0:21,0:21:63.19:0,63,863	1/1:2,14:16:44.87:425,45,0	1/1:1,8:9:26.86:231,27,0	1/1:1,11:12:31.08:320,31,0	1/1:0,7:7:8.57:57,9,0	1/1:1,13:14:39.35:314,39,0	1/1:2,14:19:47.39:459,47,0	1/1:1,12:13:35.04:247,35,0	1/1:4,18:22:65.90:619,66,0	1/1:2,17:19:53.92:469,54,0	1/1:3,10:13:31.99:256,32,0	1/1:0,5:5:12.48:111,12,0	0/0:14,0:14:42.14:0,42,586	0/0:10,0:10:30.10:0,30,420	0/0:41,0:41:99:0,123,1668	1/1:0,10:10:23.32:197,23,0	1/1:0,6:6:11.97:96,12,0	1/1:3,7:10:14.59:172,15,0	1/1:0,14:14:36.39:293,36,0	1/1:2,19:21:59.88:580,60,0	1/1:1,22:23:62.96:549,63,0	1/1:0,13:13:39.01:350,39,0
chr10	15485695	.	GCTCC	G	9690.53	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=15.176;DP=427;FS=0.000;HRun=0;HaplotypeScore=150.5391;InbreedingCoeff=0.9788;MQ=71.39;MQ0=0;MQRankSum=-15.283;QD=34.49;ReadPosRankSum=2.859;VQSLOD=5.0429;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,28:30:66.67:854,67,0	1/1:0,6:6:15.05:196,15,0	0/0:11,0:11:32.13:0,32,717	0/0:11,0:12:33.09:0,33,808	0/0:16,0:16:48.16:0,48,1388	0/0:19,0:19:57.20:0,57,1649	0/0:21,0:21:63.19:0,63,1760	1/1:2,14:16:45.15:669,45,0	1/1:1,8:9:24.07:302,24,0	1/1:0,12:12:35.91:501,36,0	1/1:0,7:7:9.03:112,9,0	1/1:0,13:13:39.13:505,39,0	1/1:6,13:19:47.02:553,47,0	1/1:1,12:13:36.09:432,36,0	1/1:5,17:22:63.18:814,63,0	1/1:2,17:19:54.16:700,54,0	1/1:3,10:13:33.11:436,33,0	1/1:0,5:5:15.05:209,15,0	0/0:14,0:14:42.14:0,42,1174	0/0:10,0:10:30.10:0,30,869	0/0:43,0:43:99:0,129,3675	1/1:1,8:9:23.81:274,24,0	1/1:3,3:6:15.05:192,15,0	1/1:4,7:11:15:169,15,0	1/1:0,14:14:39.13:510,39,0	1/1:3,18:21:60.19:862,60,0	1/1:1,22:23:63.21:858,63,0	1/1:0,13:13:39.13:544,39,0
chr10	15487145	.	TC	T	1175.13	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=6.144;DP=532;FS=0.580;HRun=6;HaplotypeScore=54.7833;InbreedingCoeff=0.9742;MQ=95.93;MQ0=0;MQRankSum=-2.683;QD=21.37;ReadPosRankSum=-0.522;VQSLOD=2.6580;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:93.30:0,93,1223	0/0:4,0:4:12.04:0,12,158	0/0:31,1:32:48.84:0,49,813	0/0:23,0:23:50.29:0,50,632	0/0:21,0:21:54.15:0,54,681	0/0:18,0:18:51.17:0,51,669	0/0:23,0:23:66.20:0,66,852	0/0:13,0:13:33.10:0,33,422	0/0:18,0:18:54.18:0,54,708	0/0:16,0:16:45.15:0,45,590	0/0:10,0:10:24.08:0,24,315	0/0:23,0:23:63.18:0,63,797	0/0:15,0:15:42.14:0,42,551	0/0:24,0:24:66.21:0,66,860	0/0:19,0:19:57.17:0,57,735	0/0:19,0:19:45.15:0,45,590	0/0:39,0:39:99:0,108,1376	0/0:28,0:28:66.21:0,66,862	1/1:4,9:13:27.05:281,27,0	1/1:1,10:11:30.07:321,30,0	1/1:5,26:31:48.90:715,49,0	0/0:4,0:4:12.04:0,12,152	0/0:8,0:8:21.07:0,21,275	0/0:31,0:31:90.29:0,90,1171	0/0:8,0:8:24.08:0,24,316	0/0:13,0:13:36.07:0,36,454	0/0:24,0:24:63.15:0,63,780	0/0:8,0:8:24.08:0,24,316
chr10	15487252	.	AG	A	4218.38	PASS	AB=0.720;AC=47;AF=0.839;AN=56;BaseQRankSum=-1.707;DP=399;FS=2.080;HRun=11;HaplotypeScore=61.0622;InbreedingCoeff=0.2163;MQ=73.86;MQ0=0;MQRankSum=-0.454;QD=11.16;ReadPosRankSum=4.308;VQSLOD=4.3414;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:9,10:20:16.98:129,17,0	1/1:3,2:5:2.94:25,3,0	0/0:9,1:10:6:0,6,54	0/0:11,0:11:14.01:0,14,120	1/1:7,4:11:8.97:74,9,0	1/1:3,3:7:4.53:30,5,0	1/1:14,16:31:67.92:544,68,0	0/1:7,2:9:17.03:52,0,17	1/1:8,10:18:35.91:289,36,0	1/1:6,2:8:8.98:74,9,0	1/1:0,2:2:3:25,3,0	0/1:13,8:22:23.17:125,0,23	1/1:7,6:13:29.95:244,30,0	0/1:10,6:16:5.03:167,0,5	1/1:7,8:15:25.49:199,25,0	1/1:2,6:8:17.98:147,18,0	1/1:10,21:34:43.02:527,43,0	1/1:15,18:33:42.06:494,42,0	0/1:5,0:8:5.86:6,0,18	1/1:2,0:5:3.85:11,4,0	1/1:14,0:38:14.77:84,15,0	1/1:3,1:4:8.93:65,9,0	1/1:3,1:4:5.99:49,6,0	1/1:12,20:33:70.09:570,70,0	1/1:6,4:10:5.96:47,6,0	1/1:5,2:7:8.98:73,9,0	1/1:3,5:9:14.02:104,14,0	0/1:3,4:8:14.33:66,0,14
chr10	15490526	.	GGA	G	2365.06	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.754;DP=657;FS=6.503;HRun=0;HaplotypeScore=80.5504;InbreedingCoeff=0.9997;MQ=78.28;MQ0=0;MQRankSum=-1.253;QD=36.39;ReadPosRankSum=1.100;VQSLOD=5.6229;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,123,2171	0/0:12,0:12:33.11:0,33,586	0/0:24,0:24:54.18:0,54,929	0/0:31,0:29:66.61:0,67,1029	0/0:18,0:18:51.17:0,51,895	0/0:17,0:17:42.14:0,42,745	0/0:30,0:30:81.26:0,81,1395	0/0:29,0:29:78.26:0,78,1344	0/0:19,0:19:51.17:0,51,893	0/0:25,0:25:60.21:0,60,1052	0/0:14,0:14:36.12:0,36,628	0/0:15,0:15:42.14:0,42,720	0/0:16,0:16:42.14:0,42,733	0/0:27,0:27:75.26:0,75,1317	0/0:23,0:23:63.22:0,63,1118	0/0:15,0:15:39.13:0,39,686	0/0:39,0:39:99:0,108,1871	0/0:27,0:27:72.25:0,72,1268	1/1:1,10:11:33.11:448,33,0	1/1:1,16:17:45.15:618,45,0	1/1:0,37:37:99:1442,105,0	0/0:31,0:31:72.25:0,72,1265	0/0:24,0:24:72.25:0,72,1264	0/0:30,0:30:87.30:0,87,1531	0/0:15,0:15:39.13:0,39,689	0/0:25,0:25:63.22:0,63,1107	0/0:26,0:26:72.23:0,72,1224	0/0:15,0:15:45.15:0,45,793
chr10	15491200	.	A	AAAAC	6318.56	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-12.683;DP=597;FS=1.951;HRun=0;HaplotypeScore=85.4308;InbreedingCoeff=0.9775;MQ=62.64;MQ0=3;MQRankSum=-1.021;QD=40.50;ReadPosRankSum=-0.864;VQSLOD=5.0003;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,120,1857	0/0:5,0:5:15.05:0,15,247	0/0:27,0:19:26.50:0,26,289	0/0:10,0:7:18.06:0,18,282	1/1:6,9:15:24.05:519,24,0	1/1:5,23:29:7.85:1270,8,0	1/1:2,20:22:48.16:1173,48,0	0/0:18,0:18:30.07:0,30,422	0/0:27,0:27:69.21:0,69,1053	0/0:18,0:18:45.15:0,45,719	0/0:14,0:14:39.11:0,39,593	0/0:15,0:15:39.13:0,39,642	0/0:17,0:17:45.13:0,45,712	0/0:16,0:16:33.10:0,33,518	0/0:19,0:19:51.16:0,51,807	0/0:21,0:21:51.15:0,51,810	0/0:31,0:31:69.21:0,69,1083	0/0:20,0:20:54.02:0,54,727	1/1:13,12:24:39.08:812,39,0	1/1:3,12:16:39.06:792,39,0	1/1:12,35:48:72.25:1752,72,0	0/0:8,0:8:18.06:0,18,296	0/0:16,0:16:39.03:0,39,584	0/0:28,0:28:66.16:0,66,1024	0/0:13,0:13:33.08:0,33,493	0/0:27,0:27:72.23:0,72,1137	0/0:21,0:21:54.17:0,54,860	0/0:17,0:18:51.14:0,51,790
chr10	15491895	.	CG	C	1765.48	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=2.369;DP=449;FS=4.485;HRun=4;HaplotypeScore=53.9877;InbreedingCoeff=0.9567;MQ=78.88;MQ0=0;MQRankSum=-1.368;QD=28.48;ReadPosRankSum=2.886;VQSLOD=3.3978;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,108,1470	0/0:6,0:6:15.05:0,15,209	0/0:10,0:10:30.10:0,30,402	0/0:13,0:13:26.01:0,26,376	0/0:9,0:9:27.09:0,27,376	0/0:13,0:13:39.12:0,39,526	0/0:27,0:27:78.20:0,78,1021	0/0:18,0:18:45.14:0,45,614	0/0:13,0:13:39.13:0,39,544	0/0:16,0:16:45.14:0,45,611	0/0:5,0:5:12.04:0,12,168	0/0:23,0:23:69.23:0,69,965	0/0:7,0:7:21.01:0,21,254	0/0:18,0:18:51.17:0,51,712	0/0:17,0:17:48.16:0,48,671	0/0:12,0:12:33.11:0,33,461	0/0:31,0:31:93.31:0,93,1300	0/0:25,0:25:75.21:0,75,1026	1/1:0,5:5:12.04:144,12,0	1/1:0,8:8:21.06:252,21,0	1/1:2,47:49:99:1508,126,0	0/0:10,0:10:30.06:0,30,396	0/0:9,0:9:24.05:0,24,290	0/0:26,0:26:75.22:0,75,1011	0/0:4,0:4:12.04:0,12,168	0/0:14,0:14:42.14:0,42,587	0/0:16,0:16:48.16:0,48,671	0/0:9,0:9:27.09:0,27,377
chr10	15492787	.	A	AGGGGGAG	29058.12	PASS	AB=0.684;AC=31;AF=0.554;AN=56;BaseQRankSum=4.881;DP=759;FS=2.339;HRun=0;HaplotypeScore=180.5948;InbreedingCoeff=-0.5061;MQ=69.77;MQ0=1;MQRankSum=-13.642;QD=41.57;ReadPosRankSum=7.783;VQSLOD=4.2674;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:47:99:1142,0,228	0/1:6,0:11:30.19:357,0,30	0/0:26,0:25:31.77:0,32,958	0/0:34,0:33:77.01:0,77,1262	0/1:23,0:23:11.72:1044,0,12	1/1:27,0:27:35.29:1528,35,0	0/1:32,0:31:6.79:1349,0,7	0/1:16,0:29:99:853,0,157	0/1:13,0:34:73.73:1552,0,74	0/1:11,0:21:99:953,0,141	0/1:6,0:15:87.62:354,0,88	1/1:9,0:30:11.19:1424,11,0	0/1:11,0:27:38.72:1387,0,39	0/1:8,0:26:14.81:1338,0,15	0/1:15,0:35:99:1733,0,147	0/1:8,0:34:84.58:1716,0,85	0/1:10,0:27:73.75:1161,0,74	0/1:16,0:26:99:861,0,187	1/1:3,10:14:42.01:915,42,0	1/1:3,13:19:44.90:1082,45,0	1/1:2,24:33:20.35:830,20,0	0/1:11,0:25:53.61:1031,0,54	0/1:12,0:25:89.29:798,0,89	0/1:12,0:33:80.14:1053,0,80	0/1:11,0:24:40.73:1197,0,41	0/1:13,0:39:99:2094,0,156	0/1:13,0:31:69.42:1167,0,69	0/1:8,0:10:53.95:140,0,54
chr10	15492788	.	G	GGGAGAGC	29570.59	PASS	AB=1.000;AC=30;AF=0.536;AN=56;BaseQRankSum=3.171;DP=758;FS=1.528;HRun=0;HaplotypeScore=181.7742;InbreedingCoeff=-0.5567;MQ=69.76;MQ0=1;MQRankSum=-12.897;QD=42.36;ReadPosRankSum=10.487;VQSLOD=3.4350;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:48,0:48:99:1138,0,169	0/1:11,0:11:26.85:354,0,27	0/0:28,0:27:55.89:0,56,908	0/0:32,0:31:70.23:0,70,1188	1/1:3,21:26:45.02:1541,45,0	1/1:3,24:28:57.20:2217,57,0	1/1:6,25:33:57.13:2082,57,0	0/1:29,0:29:81.35:793,0,81	0/1:34,0:34:78.60:1536,0,79	0/1:23,0:23:99:977,0,136	0/1:16,0:15:27.94:359,0,28	1/1:30,0:30:8.19:1403,8,0	0/1:27,0:27:40.57:1364,0,41	0/1:26,0:26:18.81:1310,0,19	0/1:35,0:35:99:1798,0,110	0/1:34,0:34:91.77:1693,0,92	0/1:27,0:27:89.64:1151,0,90	0/1:26,0:26:99:940,0,173	0/1:13,0:13:74.99:354,0,75	0/1:19,0:19:56.35:588,0,56	0/1:26,0:26:1.48:539,0,1	0/1:25,0:25:11.86:1022,0,12	0/1:25,0:24:79.11:788,0,79	0/1:34,0:34:73.82:1036,0,74	0/1:24,0:24:39.64:1198,0,40	0/1:39,0:39:99:2099,0,123	0/1:30,0:30:64.62:1153,0,65	0/1:9,0:9:49.78:139,0,50
chr10	15493299	.	GA	G	6952.68	PASS	AB=0.786;AC=52;AF=0.929;AN=56;BaseQRankSum=-4.398;DP=533;FS=7.283;HRun=12;HaplotypeScore=65.6658;InbreedingCoeff=0.4938;MQ=65.35;MQ0=9;MQRankSum=-1.636;QD=13.71;ReadPosRankSum=2.601;VQSLOD=5.2162;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,21:29:42.38:311,42,0	1/1:1,5:6:14.94:116,15,0	0/0:22,1:10:12.62:0,13,85	0/1:29,0:11:7.99:8,0,54	1/1:8,13:20:32.80:251,33,0	1/1:8,18:27:51.64:380,52,0	1/1:3,18:22:51.89:383,52,0	1/1:5,10:16:19.84:145,20,0	1/1:1,9:10:20.92:163,21,0	1/1:2,23:25:62.57:478,63,0	1/1:4,12:18:27.92:197,28,0	1/1:6,10:16:32.85:255,33,0	1/1:2,8:10:23.83:185,24,0	1/1:1,8:9:20.92:162,21,0	1/1:4,13:18:37.66:283,38,0	1/1:2,14:18:39.94:290,40,0	1/1:6,33:42:4.97:612,5,0	1/1:5,14:23:22.63:258,23,0	1/1:6,9:14:29.88:232,30,0	1/1:5,17:22:46.75:352,47,0	0/1:3,9:12:0.54:179,0,1	1/1:2,17:21:40.86:308,41,0	1/1:8,13:20:37.07:281,37,0	1/1:3,15:18:35.84:279,36,0	1/1:4,11:15:26.87:209,27,0	1/1:0,5:6:16.98:122,17,0	1/1:3,26:29:39.14:461,39,0	1/1:3,2:6:7.97:52,8,0
chr10	15494749	.	T	TCA	1409.99	PASS	AB=1.000;AC=43;AF=0.935;AN=46;BaseQRankSum=1.256;DP=376;FS=0.000;HRun=0;HaplotypeScore=85.7321;InbreedingCoeff=0.1019;MQ=55.43;MQ0=11;MQRankSum=-0.309;QD=4.55;ReadPosRankSum=0.927;VQSLOD=2.4677;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:29,1:29:17.93:177,18,0	1/1:5,0:5:3.01:45,3,0	./.	./.	1/1:15,0:15:18:178,18,0	1/1:13,0:13:9.89:92,10,0	1/1:21,0:20:15.62:112,16,0	1/1:16,0:15:5.91:25,6,0	1/1:6,0:5:6.02:85,6,0	1/1:8,1:7:3.48:43,3,0	1/1:11,0:11:3.01:42,3,0	1/1:8,0:8:3:25,3,0	1/1:9,0:8:3.01:34,3,0	./.	0/0:10,0:10:2.94:0,3,18	1/1:12,0:13:8.98:82,9,0	1/1:22,2:23:16.57:188,17,0	1/1:18,0:18:5.96:45,6,0	1/1:11,0:11:3.45:23,3,0	./.	0/1:17,0:16:18.07:59,0,18	1/1:10,0:9:2.86:18,3,0	1/1:11,0:11:5.96:44,6,0	1/1:25,0:26:15.77:119,16,0	1/1:14,0:14:3:26,3,0	1/1:14,0:14:0.47:1,0,0	1/1:7,1:8:3.01:44,3,0	./.
chr10	15494792	.	AC	A	673.72	PASS	AB=1.000;AC=13;AF=0.241;AN=54;BaseQRankSum=-3.233;DP=310;FS=5.270;HRun=7;HaplotypeScore=76.1054;InbreedingCoeff=0.4846;MQ=60.02;MQ0=19;MQRankSum=0.095;QD=8.86;ReadPosRankSum=1.197;VQSLOD=1.1778;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:25:10.07:0,10,62	./.	0/0:14,0:5:14.82:0,15,124	0/0:19,0:12:11.41:0,11,250	1/1:8,6:14:13.84:147,14,0	1/1:5,8:12:23.57:220,24,0	1/1:6,16:20:44.74:428,45,0	1/1:5,0:4:1.55:4,2,0	0/0:7,0:5:4.40:0,4,18	0/0:10,0:10:10.66:0,11,66	0/0:4,0:6:2.49:0,2,9	0/0:3,0:3:2.88:0,3,15	0/1:3,0:7:1.99:2,0,4	0/0:0,0:2:0.54:0,1,11	0/0:5,0:8:5.88:0,6,44	0/0:7,0:8:6.01:0,6,38	0/0:14,0:25:22.39:0,22,137	0/0:9,0:21:11.80:0,12,90	1/1:7,0:6:3.05:8,3,0	1/1:5,0:5:0.47:1,0,0	0/0:17,0:13:8.73:0,9,58	0/0:3,0:5:5.60:0,6,39	0/0:7,0:8:1.31:0,1,14	0/0:16,0:16:4.50:0,5,35	0/0:7,0:8:5.46:0,5,29	0/0:9,0:7:2.84:0,3,10	0/0:3,0:7:3.32:0,3,31	0/0:2,0:2:0.47:0,0,1
chr10	15495798	.	A	AG	3212.13	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-8.472;DP=635;FS=1.474;HRun=1;HaplotypeScore=64.7635;InbreedingCoeff=0.9960;MQ=89.88;MQ0=0;MQRankSum=-2.627;QD=37.35;ReadPosRankSum=0.229;VQSLOD=4.0168;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,141,1798	0/0:11,0:11:33:0,33,388	0/0:26,0:26:77.99:0,78,919	0/0:23,0:23:56.48:0,56,710	0/0:18,0:18:54.16:0,54,686	0/0:17,0:17:48.10:0,48,589	0/0:27,0:27:78.25:0,78,1013	0/0:27,0:27:75.22:0,75,943	0/0:23,0:23:69.21:0,69,880	0/0:11,0:11:30.09:0,30,380	0/0:9,0:9:27.03:0,27,317	0/0:29,0:29:84.26:0,84,1077	0/0:23,0:23:69.22:0,69,896	0/0:24,0:24:69.22:0,69,895	0/0:16,0:16:45.15:0,45,584	0/0:30,0:30:81.26:0,81,1051	0/0:33,0:33:96.28:0,96,1215	0/0:29,0:29:81.26:0,81,1049	1/1:0,15:15:42.08:550,42,0	1/1:1,13:14:33.07:470,33,0	1/1:0,57:57:99:2336,157,0	0/0:16,0:16:45.10:0,45,541	0/0:9,0:9:27.08:0,27,338	0/0:44,0:43:99:0,126,1604	0/0:17,0:17:45.15:0,45,584	0/0:20,0:20:60.20:0,60,779	0/0:14,0:14:39.13:0,39,506	0/0:6,0:6:18.06:0,18,234
chr10	15497313	.	G	GGA	2982.83	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-1.502;DP=672;FS=2.691;HRun=0;HaplotypeScore=91.2600;InbreedingCoeff=0.9873;MQ=64.47;MQ0=4;MQRankSum=-2.657;QD=21.31;ReadPosRankSum=1.342;VQSLOD=4.2128;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:93.13:0,93,1098	0/0:11,0:11:24.08:0,24,304	0/0:24,0:17:39.99:0,40,433	0/0:39,0:27:38.42:0,38,507	1/1:2,25:27:69.03:1047,69,0	1/1:2,16:18:30.10:497,30,0	1/1:6,22:28:54.18:894,54,0	0/0:28,0:28:63.19:0,63,776	0/0:24,0:24:37.75:0,38,635	0/0:34,0:34:81.22:0,81,980	0/0:15,0:15:39.03:0,39,435	0/0:20,0:20:56.66:0,57,679	0/0:23,0:23:54.12:0,54,654	0/0:26,0:26:63.17:0,63,759	0/0:33,0:33:87.24:0,87,1053	0/0:29,0:29:81.24:0,81,999	0/0:25,0:25:60.15:0,60,729	0/0:11,0:11:33.07:0,33,400	1/1:7,0:21:30.02:265,30,0	1/1:10,2:25:40.79:384,41,0	1/1:9,1:18:9:80,9,0	0/0:20,0:20:48.11:0,48,578	0/0:19,0:19:39.11:0,39,481	0/0:17,0:17:45.06:0,45,534	0/0:24,0:24:51.12:0,51,627	0/0:27,0:27:54.13:0,54,644	0/0:27,0:27:63.02:0,63,760	0/0:17,0:17:45.11:0,45,541
chr10	15497644	.	GCATGCATGCACACA	G	1292.32	PASS	AB=1.000;AC=6;AF=0.107;AN=56;BaseQRankSum=7.459;DP=665;FS=10.434;HRun=0;HaplotypeScore=232.5140;InbreedingCoeff=0.5730;MQ=60.99;MQ0=10;MQRankSum=-5.074;QD=13.05;ReadPosRankSum=-1.397;VQSLOD=0.7488;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:41.16:0,41,1464	0/0:11,0:11:30.08:0,30,939	0/1:26,0:9:8.93:9,0,95	0/1:35,0:9:29.66:30,0,84	0/0:15,0:15:15.05:0,15,697	0/0:15,0:14:12.04:0,12,516	0/0:33,0:33:87.15:0,87,3791	0/0:24,0:24:60.21:0,60,2046	0/0:20,0:20:48.16:0,48,2168	0/0:29,0:29:81.28:0,81,3790	0/0:14,0:14:39.13:0,39,1961	0/0:21,0:21:48.16:0,48,1977	0/0:28,0:28:66.23:0,66,3212	0/0:21,0:21:37.76:0,38,1530	0/0:23,0:23:53.51:0,54,2486	0/0:24,0:24:58.44:0,58,2794	0/0:32,0:32:87.30:0,87,4233	0/0:32,0:31:66.23:0,66,3192	1/1:8,15:23:39.48:917,39,0	1/1:5,10:15:8.63:465,9,0	0/0:13,43:55:1.49:0,1,5	0/0:16,0:16:27.09:0,27,1279	0/0:7,0:7:18.06:0,18,690	0/0:33,0:32:75.21:0,75,3447	0/0:25,0:25:48.56:0,49,1592	0/0:22,0:22:61.09:0,61,2406	0/0:22,0:22:60.19:0,60,2606	0/0:15,0:14:36.12:0,36,1580
chr10	15497650	.	ATG	A	553.73	PASS	AB=0.936;AC=10;AF=0.179;AN=56;BaseQRankSum=6.444;DP=630;FS=5.837;HRun=0;HaplotypeScore=111.9403;InbreedingCoeff=0.3808;MQ=57.44;MQ0=13;MQRankSum=-5.049;QD=3.15;ReadPosRankSum=-3.092;VQSLOD=1.2481;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:26,2:28:5.51:6,0,450	0/0:8,0:8:21.02:0,21,252	0/1:16,0:3:0.16:0,0,26	0/1:26,1:4:18.15:18,0,47	0/0:16,0:15:15.05:0,15,207	0/0:13,0:12:9.03:0,9,151	0/0:32,0:31:82.62:0,83,1380	0/0:19,0:19:49.72:0,50,860	0/0:21,0:21:47.89:0,48,797	0/0:30,0:30:63.01:0,63,1348	0/1:14,1:15:1.64:2,0,531	0/0:20,2:22:1.48:0,1,622	0/0:28,0:28:50.17:0,50,958	0/0:26,0:26:41.08:0,41,539	0/0:22,0:22:51.15:0,51,773	0/0:24,0:24:57.63:0,58,783	0/0:32,0:32:78.23:0,78,1083	0/0:31,1:31:63.16:0,63,863	1/1:18,4:22:48.34:555,48,0	1/1:12,0:11:11.82:78,12,0	0/1:44,5:48:0:0,0,0	0/0:16,0:16:26.84:0,27,442	0/1:6,1:7:28.61:29,0,206	0/0:32,1:32:25.47:0,25,895	0/0:21,0:21:38.85:0,39,566	0/0:23,0:23:59.29:0,59,894	0/0:20,1:21:22.24:0,22,664	0/0:15,0:14:36.09:0,36,576
chr10	15497652	.	G	GCACA	3838.10	PASS	AB=0.781;AC=28;AF=0.560;AN=50;BaseQRankSum=0.235;DP=676;FS=2.107;HRun=0;HaplotypeScore=128.3548;InbreedingCoeff=-0.3050;MQ=57.30;MQ0=14;MQRankSum=1.771;QD=7.27;ReadPosRankSum=-0.161;VQSLOD=2.8025;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:12,17:34:11.18:106,11,0	1/1:6,0:8:2.74:12,3,0	./.	./.	0/1:16,0:15:8.33:8,0,78	0/0:12,0:12:2.29:0,2,45	0/0:32,0:31:6.76:0,7,146	0/1:22,0:21:8.40:8,0,55	0/1:12,0:20:10.50:10,0,73	0/1:24,0:32:64.37:102,0,64	0/1:14,0:18:49.15:96,0,49	1/1:14,9:25:14.45:237,14,0	0/1:22,5:29:3.70:379,0,4	0/1:10,14:30:58.21:81,0,58	0/1:12,8:23:27.11:229,0,27	0/1:8,13:26:17.37:552,0,17	0/1:14,0:35:99:172,0,156	0/1:13,18:37:6.05:632,0,6	0/1:22,0:21:28.12:28,0,45	0/0:12,0:11:5.55:0,6,55	./.	0/1:8,9:20:54.51:131,0,55	0/1:8,0:8:27.06:27,0,30	1/1:15,20:39:15.58:604,16,0	1/1:11,10:23:9.92:216,10,0	1/1:18,0:25:12.93:165,13,0	0/1:14,0:21:41.18:41,0,164	0/1:10,0:12:1.56:2,0,88
chr10	15497654	.	A	ACG	1459.08	PASS	AB=0.958;AC=24;AF=0.429;AN=56;BaseQRankSum=6.182;DP=690;FS=0.000;HRun=0;HaplotypeScore=121.5349;InbreedingCoeff=-0.2636;MQ=57.14;MQ0=14;MQRankSum=2.300;QD=2.55;ReadPosRankSum=4.209;VQSLOD=2.0918;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:35,0:35:36.48:36,0,118	0/1:9,0:9:3.73:4,0,78	1/1:16,0:2:2.04:6,2,0	0/1:26,0:4:2.08:5,0,2	0/1:4,12:15:8.01:149,0,8	0/1:5,11:15:4.08:52,0,4	1/1:26,7:32:30.02:756,30,0	0/0:22,0:21:43.13:0,43,523	0/1:20,0:20:1.46:1,0,295	0/1:33,0:33:14.22:14,0,623	0/1:18,0:18:44.12:44,0,199	0/1:26,0:26:1.84:2,0,228	0/1:28,0:28:54.10:54,0,298	0/1:29,0:29:8.19:8,0,209	0/1:22,0:22:27.05:27,0,208	0/1:26,0:26:3.40:3,0,167	0/1:34,0:34:99:191,0,344	0/1:38,0:37:49.89:50,0,195	0/0:22,0:21:31.78:0,32,217	0/0:12,0:11:11.47:0,11,62	0/1:49,0:48:0.13:0,0,0	0/0:23,0:23:16.39:0,16,185	0/1:10,0:10:0.71:1,0,142	0/1:40,0:39:63.80:64,0,236	0/0:23,0:23:24.58:0,25,237	0/1:26,0:26:55.32:55,0,295	0/1:23,0:23:84.77:85,0,258	0/0:15,0:14:9.87:0,10,262
chr10	15497854	.	A	AT	2145.64	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=6.913;DP=476;FS=3.982;HRun=6;HaplotypeScore=69.4247;InbreedingCoeff=0.9628;MQ=71.48;MQ0=0;MQRankSum=-2.288;QD=30.22;ReadPosRankSum=0.351;VQSLOD=4.3278;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:42:99:0,102,1025	0/0:9,0:9:24.05:0,24,245	0/0:8,0:8:21.05:0,21,214	0/0:12,0:9:12.97:0,13,125	0/0:11,0:11:24.05:0,24,245	0/0:4,0:4:12.03:0,12,122	0/0:6,0:6:12.02:0,12,122	0/0:24,0:24:63.12:0,63,632	0/0:9,0:9:21.04:0,21,214	0/0:21,0:21:54.12:0,54,551	0/0:11,0:11:33.08:0,33,337	0/0:18,0:18:26.99:0,27,275	0/0:17,0:16:33.08:0,33,337	0/0:13,0:13:24.04:0,24,245	0/0:15,0:15:39.06:0,39,404	0/0:15,0:15:39.09:0,39,398	0/0:29,0:29:63.13:0,63,643	0/0:23,0:23:42.09:0,42,428	1/1:4,22:26:72.22:893,72,0	1/1:2,28:30:75.24:943,75,0	1/1:3,12:15:36.12:452,36,0	0/0:15,0:15:45.09:0,45,454	0/0:9,0:9:21.04:0,21,213	0/0:18,0:18:48.09:0,48,483	0/0:23,0:23:54.10:0,54,542	0/0:23,0:23:60.14:0,60,612	0/0:15,0:15:35.77:0,36,367	0/0:14,0:14:36.05:0,36,358
chr10	15497886	.	CT	C	1401.07	PASS	AB=0.831;AC=25;AF=0.446;AN=56;BaseQRankSum=1.073;DP=597;FS=1.427;HRun=16;HaplotypeScore=93.4653;InbreedingCoeff=-0.0631;MQ=63.04;MQ0=3;MQRankSum=4.377;QD=3.17;ReadPosRankSum=4.188;VQSLOD=0.2966;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:42,11:53:12.29:280,0,12	0/0:10,0:10:5.99:0,6,51	0/1:28,0:14:7.31:8,0,7	0/0:16,0:9:4.55:0,5,21	1/1:16,1:32:13.57:68,14,0	0/0:6,0:7:2.98:0,3,19	0/1:18,0:19:17.44:17,0,21	0/1:20,1:21:8.59:9,0,144	0/0:11,0:11:24.40:0,24,193	0/0:22,0:20:29.11:0,29,183	0/0:18,0:18:21.15:0,21,158	0/1:7,14:21:10.23:98,0,10	1/1:14,8:20:18.80:111,19,0	0/1:12,4:17:37.04:101,0,37	0/1:21,1:21:27.29:50,0,27	0/1:14,1:16:14.85:95,0,15	0/0:41,1:41:24.71:0,25,392	0/1:12,17:29:49.41:158,0,49	1/1:18,0:23:11.60:53,12,0	0/1:16,0:22:0.66:30,0,1	1/1:6,1:12:13.48:48,13,0	0/1:8,2:11:5.42:45,0,5	0/1:10,6:16:44.35:79,0,44	1/1:18,5:23:9.49:166,9,0	0/1:9,12:21:20.09:116,0,20	0/0:25,0:26:12.91:0,13,225	0/1:20,0:19:18.65:19,0,153	0/1:10,0:10:23.96:24,0,39
chr10	15498550	.	C	CT	743.95	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-5.473;DP=522;FS=0.766;HRun=8;HaplotypeScore=52.3530;InbreedingCoeff=0.9937;MQ=70.48;MQ0=6;MQRankSum=-1.216;QD=20.67;ReadPosRankSum=1.511;VQSLOD=3.7001;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,99,905	0/0:12,0:12:27:0,27,247	0/0:16,0:12:19.82:0,20,170	0/0:21,0:20:45.50:0,46,367	0/0:20,0:21:59.04:0,59,522	0/0:24,0:24:66.02:0,66,602	0/0:21,0:21:54.03:0,54,494	0/0:23,0:22:45:0,45,408	0/0:15,0:15:42.02:0,42,384	0/0:24,0:23:63.03:0,63,576	0/0:20,0:20:45.01:0,45,409	0/0:17,0:17:36:0,36,329	0/0:14,0:14:39.02:0,39,357	0/0:11,0:11:30.01:0,30,275	0/0:16,0:16:36.01:0,36,329	0/0:16,0:16:41.98:0,42,375	0/0:41,0:41:99:0,105,953	0/0:22,0:21:54.03:0,54,494	1/1:4,9:12:27.06:297,27,0	1/1:3,11:13:30.09:346,30,0	1/1:0,9:9:20.89:242,21,0	0/0:8,0:8:21.01:0,21,192	0/0:13,0:12:36.02:0,36,329	0/0:16,0:16:48.03:0,48,438	0/0:19,0:19:48:0,48,434	0/0:21,0:21:51.01:0,51,463	0/0:20,0:20:54.03:0,54,494	0/0:16,0:16:31.79:0,32,300
chr10	15499635	.	TAC	T	2221.11	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.695;DP=586;FS=10.855;HRun=0;HaplotypeScore=68.2498;InbreedingCoeff=0.9955;MQ=90.82;MQ0=1;MQRankSum=-1.852;QD=38.97;ReadPosRankSum=2.213;VQSLOD=5.1297;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,151,2887	0/0:7,0:7:18.06:0,18,347	0/0:22,0:22:63.19:0,63,1145	0/0:24,0:24:63:0,63,1107	1/1:0,14:14:42.11:618,42,0	1/1:1,19:20:54.18:827,54,0	1/1:0,23:23:60.20:919,60,0	0/0:33,0:33:99:0,99,1874	0/0:22,0:22:66.21:0,66,1241	0/0:22,0:22:66.23:0,66,1275	0/0:18,0:18:54.19:0,54,1013	0/0:16,0:16:45.15:0,45,866	0/0:14,0:14:42.14:0,42,797	0/0:14,0:14:42.14:0,42,811	0/0:19,0:19:57.15:0,57,990	0/0:20,0:20:57.16:0,57,1024	0/0:34,0:34:99:0,99,1866	0/0:14,0:14:39.13:0,39,733	0/0:21,0:21:63.22:0,63,1209	0/0:18,0:18:51.17:0,51,978	0/0:31,0:30:90.31:0,90,1711	0/0:23,0:23:66.23:0,66,1273	0/0:14,0:14:42.14:0,42,795	0/0:30,0:30:90.31:0,90,1738	0/0:11,0:11:33.11:0,33,623	0/0:22,0:22:66.22:0,66,1245	0/0:22,0:22:66.23:0,66,1262	0/0:7,0:7:21.05:0,21,372
chr10	15499916	.	GCT	G	250.79	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=4.633;DP=382;FS=1.326;HRun=0;HaplotypeScore=48.1814;InbreedingCoeff=0.8472;MQ=59.59;MQ0=21;MQRankSum=-2.391;QD=27.87;ReadPosRankSum=0.051;VQSLOD=4.4416;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:41:99:0,99,1877	0/0:4,0:4:9.03:0,9,172	0/0:16,0:10:27.09:0,27,527	0/0:21,0:12:30.91:0,31,607	0/0:14,0:14:33.11:0,33,648	0/0:20,0:20:45.15:0,45,884	0/0:17,0:15:45.15:0,45,874	0/0:34,0:24:69.23:0,69,1295	0/0:14,0:13:36.12:0,36,701	0/0:17,0:17:51.18:0,51,1000	0/0:8,0:7:15.05:0,15,295	0/0:13,0:12:30.10:0,30,562	0/0:4,0:4:12.04:0,12,236	0/0:12,0:12:33.11:0,33,636	0/0:10,0:9:27.09:0,27,524	0/0:13,0:13:33.11:0,33,632	0/0:22,0:21:54.18:0,54,1030	0/0:20,0:19:51.17:0,51,995	1/1:0,4:4:12.04:177,12,0	1/1:0,2:2:6.02:97,6,0	1/1:1,2:2:6.02:97,6,0	0/0:6,0:6:18.06:0,18,354	0/0:9,0:9:27.09:0,27,530	0/0:20,0:20:54.18:0,54,1054	0/0:7,0:7:21.07:0,21,412	0/0:10,0:9:27.09:0,27,514	0/0:16,0:16:48.12:0,48,890	0/0:4,0:3:9.03:0,9,177
chr10	15499922	.	GA	G	40.41	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=4.512;DP=381;FS=1.508;HRun=1;HaplotypeScore=44.6378;InbreedingCoeff=0.8197;MQ=55.35;MQ0=30;MQRankSum=-3.024;QD=5.77;ReadPosRankSum=0.771;VQSLOD=0.4707;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:38:93.32:0,93,1482	0/0:5,0:5:9:0,9,118	0/0:15,0:9:27.06:0,27,396	0/0:20,0:11:26.91:0,27,445	0/0:13,0:13:30.10:0,30,477	0/0:20,0:20:48.16:0,48,766	0/0:16,0:14:42.14:0,42,668	0/0:33,0:22:66.18:0,66,1008	0/0:15,0:14:36.08:0,36,546	0/0:16,0:15:45.15:0,45,720	0/0:11,0:9:15.05:0,15,240	0/0:15,0:14:30.10:0,30,479	0/0:5,0:5:12.04:0,12,192	0/0:13,0:12:27.09:0,27,431	0/0:11,0:10:24.08:0,24,384	0/0:10,0:10:27.09:0,27,431	0/0:21,0:20:48.16:0,48,764	0/0:21,0:20:51.09:0,51,759	1/1:0,2:2:5.69:42,6,0	1/1:0,2:2:6.01:56,6,0	1/1:1,2:2:6.01:59,6,0	0/0:7,0:6:18.06:0,18,288	0/0:7,0:7:21.07:0,21,336	0/0:21,0:21:51.17:0,51,815	0/0:7,0:7:21.07:0,21,335	0/0:11,0:10:24.08:0,24,383	0/0:14,0:13:39.03:0,39,543	0/0:5,0:4:12.04:0,12,191
chr10	15500276	.	AACAC	A	443.32	PASS	AB=0.938;AC=8;AF=0.160;AN=50;BaseQRankSum=1.129;DP=469;FS=1.183;HRun=0;HaplotypeScore=84.6068;InbreedingCoeff=0.3785;MQ=74.07;MQ0=7;MQRankSum=2.735;QD=4.87;ReadPosRankSum=-0.264;VQSLOD=1.6201;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:9.03:0,9,127	0/0:7,0:7:8.99:0,9,115	./.	./.	1/1:7,4:11:2.75:46,3,0	0/0:14,0:14:9.03:0,9,144	1/1:18,8:23:15:185,15,0	0/0:18,0:18:2.97:0,3,20	./.	0/0:8,0:7:9.03:0,9,143	0/1:10,0:8:16.90:17,0,41	0/0:12,0:16:8.49:0,8,49	0/0:7,0:8:8.77:0,9,129	0/0:20,0:20:45.63:0,46,893	0/0:9,0:14:8.29:0,8,38	0/0:11,0:13:5.74:0,6,36	0/0:10,0:12:1.55:0,2,50	1/1:14,9:23:20.19:308,20,0	0/0:17,0:17:15.01:0,15,198	0/0:15,0:15:6.02:0,6,83	0/0:30,0:29:12.01:0,12,161	0/0:12,0:12:2.74:0,3,12	0/0:13,0:13:8.66:0,9,74	0/1:18,0:21:20.96:21,0,80	0/0:5,0:8:8.50:0,8,90	0/0:18,0:17:18.90:0,19,232	0/0:13,0:11:17.71:0,18,202	0/0:7,0:7:9.03:0,9,150
chr10	15500473	.	G	GAAA	4103.67	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-0.426;DP=618;FS=2.244;HRun=1;HaplotypeScore=89.1305;InbreedingCoeff=0.9977;MQ=82.25;MQ0=0;MQRankSum=-5.237;QD=57.00;ReadPosRankSum=-0.909;VQSLOD=3.6363;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,102,1766	0/0:10,0:10:24.08:0,24,423	0/0:21,0:21:63.19:0,63,1053	0/0:22,0:22:60.14:0,60,953	0/0:22,0:22:66.23:0,66,1157	0/0:24,0:24:66.23:0,66,1164	0/0:27,0:27:78.27:0,78,1376	0/0:28,0:28:81.28:0,81,1429	0/0:19,0:19:48.16:0,48,841	0/0:24,0:24:45.43:0,45,1164	0/0:13,0:13:33.11:0,33,577	0/0:28,0:28:81.22:0,81,1367	0/0:18,0:18:54.17:0,54,919	0/0:22,0:22:66.23:0,66,1164	0/0:26,0:26:75.24:0,75,1295	0/0:21,0:21:60.21:0,60,1058	0/0:21,0:21:63.20:0,63,1082	0/0:30,0:30:87.24:0,87,1472	1/1:3,14:18:51.17:1153,51,0	1/1:2,14:17:39.09:809,39,0	1/1:1,34:37:98.99:2141,99,0	0/0:17,0:17:45.14:0,45,763	0/0:26,0:26:54.06:0,54,947	0/0:25,0:25:63.21:0,63,1095	0/0:18,0:18:54.18:0,54,946	0/0:23,0:23:63.22:0,63,1111	0/0:17,0:17:45.14:0,45,758	0/0:8,0:8:21.07:0,21,370
chr10	15501383	.	A	AG	4104.61	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=14.618;DP=751;FS=4.988;HRun=3;HaplotypeScore=86.0425;InbreedingCoeff=0.9987;MQ=82.90;MQ0=0;MQRankSum=-1.335;QD=40.24;ReadPosRankSum=1.082;VQSLOD=3.2690;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,126,1741	0/0:9,0:9:27.09:0,27,378	0/0:20,0:20:42:0,42,484	0/0:21,0:21:35.29:0,35,418	0/0:26,0:26:78.26:0,78,1089	0/0:21,0:21:63.19:0,63,863	0/0:26,0:26:75.22:0,75,1013	0/0:28,0:28:78.25:0,78,1073	0/0:31,0:31:93.31:0,93,1300	0/0:26,0:26:78.26:0,78,1090	0/0:12,0:12:33.11:0,33,460	0/0:39,0:39:99:0,108,1507	0/0:33,0:33:96.27:0,96,1303	0/0:29,0:29:84.28:0,84,1174	0/0:28,0:28:84.28:0,84,1175	0/0:29,0:29:87.29:0,87,1217	0/0:39,0:39:99:0,117,1635	0/0:32,0:32:93.28:0,93,1277	1/1:0,17:17:51.16:744,51,0	1/1:1,14:15:39.13:582,39,0	1/1:0,70:70:99:2779,187,0	0/0:20,0:20:57.17:0,57,766	0/0:17,0:16:51.17:0,51,711	0/0:38,0:38:99:0,114,1549	0/0:24,0:24:72.20:0,72,969	0/0:26,0:26:78.25:0,78,1076	0/0:24,0:23:72.24:0,72,1004	0/0:9,0:9:24.08:0,24,336
chr10	15501874	.	G	GTTT	747.39	PASS	AB=0.663;AC=4;AF=0.071;AN=56;BaseQRankSum=5.807;DP=526;FS=1.764;HRun=0;HaplotypeScore=89.0085;InbreedingCoeff=0.5578;MQ=77.56;MQ0=0;MQRankSum=-1.197;QD=17.80;ReadPosRankSum=-1.756;VQSLOD=3.1901;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:94.51:0,95,1474	0/0:10,0:10:30.10:0,30,529	0/0:16,0:15:44.70:0,45,681	0/0:17,0:17:45.72:0,46,710	0/0:18,0:18:54.18:0,54,957	0/0:17,0:17:51.17:0,51,883	0/0:24,0:24:66.20:0,66,1122	0/0:30,0:30:84.26:0,84,1435	0/0:17,0:17:48.16:0,48,851	0/0:18,0:18:51.17:0,51,903	0/0:18,0:18:54.15:0,54,772	0/0:21,0:21:51.17:0,51,900	0/0:19,0:19:57.18:0,57,948	0/0:16,0:16:45.15:0,45,801	0/0:24,0:24:69.24:0,69,1259	0/0:13,0:13:36.11:0,36,630	0/0:34,0:34:93.29:0,93,1601	0/0:25,0:25:75.20:0,75,1308	0/1:9,3:14:1.49:253,0,1	0/1:8,9:22:28.51:515,0,29	1/1:0,3:5:7.57:87,8,0	0/0:17,0:17:51.16:0,51,866	0/0:12,0:12:30.10:0,30,508	0/0:14,0:14:42.14:0,42,761	0/0:7,0:7:18.02:0,18,286	0/0:20,0:20:60.19:0,60,1042	0/0:24,0:24:60.19:0,60,1058	0/0:21,0:21:60.21:0,60,1070
chr10	15501875	.	G	GT	408.36	PASS	AB=0.935;AC=8;AF=0.143;AN=56;BaseQRankSum=7.495;DP=529;FS=4.612;HRun=10;HaplotypeScore=71.6721;InbreedingCoeff=0.6414;MQ=77.19;MQ0=0;MQRankSum=-2.857;QD=5.17;ReadPosRankSum=-5.290;VQSLOD=0.1693;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:29,1:31:14.27:0,14,287	0/0:10,0:10:17.90:0,18,158	0/0:15,0:15:16.06:0,16,128	0/0:17,0:17:16.07:0,16,136	0/0:18,0:18:38.89:0,39,320	0/0:17,0:17:23.88:0,24,194	0/0:23,0:23:41.81:0,42,391	0/0:29,0:29:65.61:0,66,524	0/0:17,0:17:41.09:0,41,317	0/0:18,0:18:29.92:0,30,246	0/1:17,1:18:10.13:10,0,164	0/0:17,4:22:15.91:0,16,332	0/0:19,0:19:38.81:0,39,311	0/0:15,0:16:34.95:0,35,273	0/0:24,0:24:59.60:0,60,463	0/0:12,0:12:32.88:0,33,263	0/0:33,0:33:67.13:0,67,591	0/0:25,0:25:65.87:0,66,534	1/1:19,1:19:35.48:194,35,0	1/1:23,0:24:51.37:292,51,0	1/1:5,0:5:8.72:49,9,0	0/0:16,1:17:0.93:0,1,213	0/1:11,1:12:8.07:8,0,143	0/0:14,0:14:30.84:0,31,267	0/0:6,0:6:11.97:0,12,96	0/0:20,0:20:35.91:0,36,293	0/0:25,0:25:46.90:0,47,430	0/0:21,0:21:53.26:0,53,425
chr10	15502927	.	GGATTGCGAGCCACCGCGT	G	9534.25	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=12.903;DP=579;FS=0.967;HRun=0;HaplotypeScore=276.5421;InbreedingCoeff=0.9770;MQ=62.69;MQ0=3;MQRankSum=-10.783;QD=102.52;ReadPosRankSum=0.689;VQSLOD=4.4280;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,153,11214	0/0:7,0:7:21.07:0,21,1814	0/0:16,0:15:45.02:0,45,1920	0/0:23,0:20:57.20:0,57,3768	1/1:2,17:19:39.13:1559,39,0	1/1:1,18:19:45.15:2354,45,0	1/1:0,16:16:33.11:1733,33,0	0/0:23,0:23:63.19:0,63,3869	0/0:18,0:18:54.17:0,54,4233	0/0:27,0:27:78.25:0,78,5283	0/0:15,0:15:42.14:0,42,3713	0/0:18,0:18:54.14:0,54,3561	0/0:20,0:20:59.57:0,60,4552	0/0:15,0:15:45.14:0,45,3542	0/0:19,0:19:57.20:0,57,4694	0/0:18,0:17:54.16:0,54,3894	0/0:48,0:48:99:0,144,11291	0/0:30,0:30:90.31:0,90,7169	1/1:0,15:15:45.09:1768,45,0	1/1:3,19:22:48.08:2055,48,0	1/1:2,0:2:5.93:65,6,0	0/0:14,0:14:35.97:0,36,2150	0/0:15,0:15:36.09:0,36,2558	0/0:29,0:29:87.28:0,87,7181	0/0:10,0:10:27.01:0,27,1661	0/0:26,0:26:72.24:0,72,5510	0/0:20,0:20:60.21:0,60,4920	0/0:22,0:22:66.20:0,66,5481
chr10	15503814	.	G	GA	12103.32	PASS	AB=0.632;AC=39;AF=0.696;AN=56;BaseQRankSum=-14.809;DP=634;FS=12.374;HRun=9;HaplotypeScore=67.9407;InbreedingCoeff=0.9257;MQ=73.53;MQ0=0;MQRankSum=-4.259;QD=25.32;ReadPosRankSum=2.510;VQSLOD=4.9037;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,28:33:85.47:932,85,0	1/1:0,3:3:9.02:100,9,0	0/0:17,0:17:32.96:0,33,280	0/0:17,0:16:35.69:0,36,306	0/0:30,0:30:77.93:0,78,669	0/0:18,0:18:50.97:0,51,439	0/0:32,0:32:86.92:0,87,743	1/1:4,26:30:49.53:727,50,0	1/1:5,12:18:32.92:346,33,0	1/1:4,26:30:75.19:820,75,0	1/1:4,19:23:51.10:550,51,0	1/1:5,21:26:57.11:617,57,0	1/1:3,12:15:30.08:332,30,0	1/1:2,12:14:33.09:365,33,0	1/1:4,24:28:66.18:730,66,0	1/1:3,22:25:60.16:664,60,0	1/1:2,20:23:57.15:627,57,0	0/1:5,7:12:4.99:178,0,5	0/0:14,0:14:41.98:0,42,361	0/0:16,0:16:41.99:0,42,365	0/0:12,0:12:26.97:0,27,232	1/1:5,19:24:34.13:604,34,0	1/1:2,19:21:48.13:531,48,0	1/1:6,32:37:45.29:914,45,0	1/1:1,19:20:45.12:498,45,0	1/1:5,26:32:81.05:877,81,0	1/1:5,33:39:86.86:929,87,0	1/1:4,20:24:72.13:761,72,0
chr10	15503897	.	AACAC	A	1221.54	PASS	AB=0.960;AC=33;AF=0.750;AN=44;BaseQRankSum=0.992;DP=552;FS=1.572;HRun=0;HaplotypeScore=111.8605;InbreedingCoeff=0.0931;MQ=74.26;MQ0=8;MQRankSum=1.072;QD=3.16;ReadPosRankSum=0.066;VQSLOD=2.3364;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:21,1:22:6.81:56,0,7	./.	./.	./.	1/1:15,0:25:5.77:50,6,0	1/1:4,0:12:8.93:68,9,0	0/0:13,0:13:3:0,3,25	0/0:9,0:9:0:0,0,0	./.	./.	1/1:15,0:19:3:28,3,0	0/1:18,0:19:17.95:22,0,18	1/1:15,2:17:9.02:136,9,0	1/1:18,0:17:3:27,3,0	0/1:20,1:20:36.46:40,0,36	1/1:23,3:26:18:211,18,0	1/1:18,0:19:3:28,3,0	0/1:15,1:15:7.52:59,0,8	1/1:20,0:20:3.01:43,3,0	./.	1/1:30,6:35:3.01:46,3,0	0/0:19,0:19:2.31:0,2,13	1/1:4,0:4:2.97:20,3,0	1/1:32,3:33:14.99:201,15,0	1/1:16,2:18:12:154,12,0	0/1:23,0:22:0.01:0,0,0	1/1:18,0:20:9.38:85,9,0	1/1:13,0:14:8.04:62,8,0
chr10	15504592	.	ACACATGATCT	A	24294.57	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=16.207;DP=846;FS=11.712;HRun=0;HaplotypeScore=284.6157;InbreedingCoeff=0.9640;MQ=74.81;MQ0=0;MQRankSum=-16.877;QD=47.92;ReadPosRankSum=2.769;VQSLOD=2.9140;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,36:45:57.13:1716,57,0	1/1:1,8:9:27.09:803,27,0	0/0:38,0:37:68.27:0,68,2760	0/0:44,0:44:88.44:0,88,3493	0/0:28,0:28:69.22:0,69,3303	0/0:33,0:33:72.23:0,72,3323	0/0:45,0:45:99:0,105,4727	1/1:7,27:34:80.95:1663,81,0	1/1:8,28:36:63.22:1940,63,0	1/1:8,29:37:85.89:2288,86,0	1/1:1,7:8:12.04:369,12,0	1/1:10,26:36:63.22:1940,63,0	1/1:8,15:23:27.09:831,27,0	1/1:3,36:39:81.28:2487,81,0	1/1:7,35:42:72.25:2216,72,0	1/1:4,28:32:60.21:1845,60,0	1/1:8,15:23:9.03:222,9,0	1/1:4,7:11:12.04:369,12,0	0/0:45,0:45:87.28:0,87,3934	0/0:12,0:12:27.09:0,27,1357	0/0:94,0:94:99:0,192,8381	1/1:4,12:16:21.07:643,21,0	1/1:6,13:19:17.57:550,18,0	1/1:8,16:24:18.06:520,18,0	1/1:1,14:15:21.07:646,21,0	1/1:9,29:38:81.22:2417,81,0	1/1:2,9:11:8.68:275,9,0	1/1:1,8:9:18.06:555,18,0
chr10	15504831	.	GGGCGC	G	889.96	PASS	AC=10;AF=0.185;AN=54;BaseQRankSum=5.891;DP=475;FS=3.107;HRun=0;HaplotypeScore=103.4158;InbreedingCoeff=0.8322;MQ=60.14;MQ0=2;MQRankSum=-4.224;QD=8.99;ReadPosRankSum=0.452;VQSLOD=2.1734;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:51.17:0,51,1128	0/0:6,0:6:18.06:0,18,368	0/0:8,0:6:12.03:0,12,138	0/0:3,0:1:3.01:0,3,41	./.	1/1:10,0:10:12.04:198,12,0	1/1:26,0:25:6.02:100,6,0	0/0:17,0:17:42.13:0,42,826	0/0:23,0:23:54.19:0,54,1434	0/0:21,0:21:57.03:0,57,1295	0/0:4,0:4:9.03:0,9,171	0/0:16,0:16:24.08:0,24,666	0/0:10,0:10:18.06:0,18,459	0/0:18,0:18:27.09:0,27,699	0/0:18,0:18:27.09:0,27,581	0/0:8,0:7:6.02:0,6,187	0/0:42,0:42:90.31:0,90,2265	0/0:27,0:27:54.16:0,54,1418	1/1:10,0:10:30.10:561,30,0	1/1:14,0:14:8.89:97,9,0	1/1:39,0:39:6.02:87,6,0	0/0:15,0:15:11.52:0,12,229	0/0:11,0:11:33.11:0,33,707	0/0:30,0:30:63.22:0,63,1573	0/0:16,0:16:36.11:0,36,785	0/0:16,0:16:48.16:0,48,1075	0/0:10,0:10:21.07:0,21,494	0/0:15,0:15:27.09:0,27,598
chr10	15504832	.	GGCGCGCGCACGCACGCACGCA	G	1949.50	PASS	AC=10;AF=0.185;AN=54;BaseQRankSum=4.934;DP=470;FS=3.101;HRun=0;HaplotypeScore=201.7378;InbreedingCoeff=0.8343;MQ=60.21;MQ0=2;MQRankSum=-4.380;QD=19.69;ReadPosRankSum=0.429;VQSLOD=2.7413;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:51.17:0,51,1770	0/0:6,0:6:18.06:0,18,511	0/0:8,0:6:12.04:0,12,159	0/0:3,0:1:3.01:0,3,132	./.	1/1:0,0:10:12.04:325,12,0	1/1:1,0:25:6.02:163,6,0	0/0:17,0:17:45.14:0,45,1238	0/0:24,0:24:57.20:0,57,3896	0/0:20,0:20:57.06:0,57,2029	0/0:4,0:4:9.03:0,9,224	0/0:14,0:14:24.08:0,24,1666	0/0:10,0:10:18.06:0,18,1064	0/0:18,0:18:27.09:0,27,1712	0/0:18,0:18:27.09:0,27,883	0/0:8,0:7:6.02:0,6,589	0/0:42,0:42:90.31:0,90,4966	0/0:24,0:24:54.16:0,54,3627	1/1:0,10:10:30.10:958,30,0	1/1:0,14:14:9.03:470,9,0	1/1:0,39:39:6.34:188,6,0	0/0:15,0:15:11.54:0,12,229	0/0:11,0:11:33.11:0,33,1329	0/0:30,0:30:63.22:0,63,3801	0/0:16,0:16:36.11:0,36,1194	0/0:16,0:16:48.16:0,48,2280	0/0:10,0:10:21.07:0,21,1091	0/0:15,0:15:27.09:0,27,1308
chr10	15504863	.	G	GCACA	7367.91	PASS	AB=0.508;AC=38;AF=0.679;AN=56;BaseQRankSum=-8.224;DP=522;FS=2.100;HRun=0;HaplotypeScore=69.7247;InbreedingCoeff=0.7448;MQ=62.19;MQ0=6;MQRankSum=2.054;QD=20.47;ReadPosRankSum=6.211;VQSLOD=3.8485;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,26:27:9.03:242,9,0	1/1:0,2:2:3.01:73,3,0	0/0:8,0:7:15.15:0,15,126	0/0:10,0:5:7.48:0,7,64	0/0:12,0:11:6.41:0,6,41	0/0:13,0:13:29.90:0,30,297	0/0:32,0:32:35.79:0,36,277	1/1:7,0:7:14.09:185,14,0	1/1:1,29:29:36.12:965,36,0	1/1:2,14:15:35.99:363,36,0	1/1:5,0:5:8.99:75,9,0	1/1:0,25:26:15.05:403,15,0	1/1:0,13:13:11.89:259,12,0	1/1:1,23:26:14.66:392,15,0	1/1:1,14:15:3.01:81,3,0	1/1:1,7:7:6.02:161,6,0	1/1:1,36:37:18.27:963,18,0	1/1:0,24:26:33.11:886,33,0	0/0:12,0:12:23.96:0,24,239	0/0:16,0:16:16.92:0,17,95	0/0:58,0:57:26.60:0,27,177	0/1:0,13:14:0.04:0,0,0	1/1:13,0:12:26.93:219,27,0	1/1:0,35:37:32.98:887,33,0	1/1:0,11:12:6.02:161,6,0	1/1:1,12:14:33.04:582,33,0	1/1:0,15:16:9.03:242,9,0	0/1:1,15:16:9.29:230,0,9
chr10	15505411	.	AAC	A	984.60	PASS	AB=0.943;AC=31;AF=0.738;AN=42;BaseQRankSum=3.647;DP=453;FS=3.205;HRun=0;HaplotypeScore=64.2937;InbreedingCoeff=0.1245;MQ=68.58;MQ0=10;MQRankSum=1.565;QD=3.28;ReadPosRankSum=0.322;VQSLOD=1.6897;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:26,2:29:17.35:151,17,0	./.	./.	./.	0/0:21,0:21:12.03:0,12,150	0/0:12,0:12:15.04:0,15,195	0/0:14,0:13:6.02:0,6,81	./.	1/1:15,2:17:6.01:64,6,0	1/1:22,1:23:6.48:63,6,0	1/1:7,4:11:3.01:32,3,0	1/1:11,2:12:6.01:64,6,0	./.	./.	1/1:13,1:15:8.81:66,9,0	1/1:8,4:12:3.01:32,3,0	1/1:18,6:24:15.03:161,15,0	0/1:13,2:14:35.14:55,0,35	0/1:13,0:13:12.32:24,0,12	0/1:16,0:16:14.94:41,0,15	0/1:21,0:21:33.27:54,0,33	1/1:5,4:8:3.01:32,3,0	1/1:15,2:17:3.01:32,3,0	1/1:12,5:16:12.70:130,13,0	1/1:16,3:18:3:32,3,0	./.	0/1:16,4:19:31.77:55,0,32	1/1:7,2:9:3.01:32,3,0
chr10	15505701	.	T	TAA	2508.99	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=13.848;DP=711;FS=3.673;HRun=9;HaplotypeScore=100.0105;InbreedingCoeff=0.8580;MQ=58.26;MQ0=3;MQRankSum=-0.569;QD=15.49;ReadPosRankSum=-2.985;VQSLOD=1.6128;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,119,1376	0/0:8,0:8:24.06:0,24,255	0/1:16,0:8:17.11:17,0,85	0/0:9,0:9:14.95:0,15,148	1/1:10,27:41:76.29:898,76,0	1/1:1,17:19:39.06:568,39,0	1/1:9,6:18:42.99:538,43,0	0/0:38,0:36:57.06:0,57,605	0/0:39,0:39:99:0,108,1148	0/0:36,0:36:60.53:0,61,888	0/0:20,0:21:52.05:0,52,561	0/0:23,0:24:57.07:0,57,652	0/0:21,0:21:51.06:0,51,523	0/0:18,0:18:51.11:0,51,535	0/0:18,0:18:48.11:0,48,511	0/0:30,0:30:87.21:0,87,924	0/0:24,0:24:72.02:0,72,724	0/0:22,0:22:51.39:0,51,515	1/1:12,1:21:19.86:291,20,0	1/1:8,0:20:2.97:164,3,0	1/1:5,0:23:26.82:217,27,0	0/0:20,0:20:57.14:0,57,606	0/0:28,0:28:75.16:0,75,796	0/0:31,0:31:72.10:0,72,745	0/0:27,0:27:66.13:0,66,693	0/0:39,0:39:99:0,102,1064	0/0:36,0:36:90.65:0,91,954	0/0:9,0:9:14.98:0,15,160
chr10	15505710	.	AC	A	1768.29	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=14.299;DP=695;FS=0.000;HRun=1;HaplotypeScore=84.0060;InbreedingCoeff=0.8995;MQ=60.83;MQ0=3;MQRankSum=-1.223;QD=11.79;ReadPosRankSum=-3.036;VQSLOD=0.7330;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,144,1797	0/0:9,0:9:27.07:0,27,338	0/0:20,0:11:28.54:0,29,261	0/1:10,0:10:27.97:28,0,144	1/1:35,0:35:75.43:509,75,0	1/1:18,0:18:40.57:233,41,0	1/1:14,4:18:43.89:300,44,0	0/0:29,0:28:77.02:0,77,940	0/0:43,0:43:99:0,129,1619	0/0:35,0:35:75.55:0,76,1253	0/0:21,0:21:57.88:0,58,743	0/0:25,0:25:75.07:0,75,894	0/0:19,0:19:57.11:0,57,687	0/0:20,0:20:56.94:0,57,714	0/0:16,0:16:48.16:0,48,653	0/0:30,0:30:90.28:0,90,1181	0/0:25,0:25:75.01:0,75,932	0/0:22,0:22:64.57:0,65,743	1/1:23,4:25:54.90:404,55,0	1/1:18,1:18:34.19:228,34,0	1/1:22,1:23:41.55:257,42,0	0/0:20,0:20:57.19:0,57,765	0/0:30,0:30:90.23:0,90,1128	0/0:27,0:27:75.18:0,75,955	0/0:22,0:22:66.20:0,66,862	0/0:39,0:39:99:0,113,1428	0/0:33,0:33:99:0,99,1295	0/0:10,0:10:30.02:0,30,336
chr10	15507667	.	C	CTCCTGCTACAAT	9436.09	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-3.842;DP=446;FS=25.917;HRun=0;HaplotypeScore=144.9534;InbreedingCoeff=0.9759;MQ=84.98;MQ0=0;MQRankSum=-12.125;QD=134.80;ReadPosRankSum=-1.535;VQSLOD=3.2954;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,99,3368	0/0:11,0:11:27.08:0,27,866	0/0:17,0:17:48.16:0,48,1553	0/0:15,0:15:42.09:0,42,1173	1/1:7,18:24:63.13:3395,63,0	1/1:0,8:8:24.08:1473,24,0	1/1:4,6:10:24.08:1396,24,0	0/0:19,0:19:51.11:0,51,1488	0/0:10,0:10:27.08:0,27,862	0/0:33,0:33:93.32:0,93,3452	0/0:9,0:9:24.07:0,24,814	0/0:19,0:19:54.18:0,54,1882	0/0:10,0:10:30.10:0,30,1128	0/0:16,0:16:48.16:0,48,1791	0/0:19,0:19:57.18:0,57,1945	0/0:13,0:13:39.13:0,39,1467	0/0:20,0:20:54.19:0,54,1931	0/0:19,0:19:48.16:0,48,1758	1/1:3,7:12:28.24:1455,28,0	1/1:5,7:12:32.89:1514,33,0	1/1:2,1:3:5.95:202,6,0	0/0:13,0:13:39.10:0,39,1281	0/0:16,0:16:48.15:0,48,1593	0/0:14,0:14:42.14:0,42,1567	0/0:10,0:10:30.10:0,30,1115	0/0:26,0:26:75.23:0,75,2552	0/0:19,0:19:54.19:0,54,2017	0/0:13,0:13:27.09:0,27,1016
chr10	15507733	.	CCCTGGTT	C	1666.60	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=7.275;DP=541;FS=26.155;HRun=0;HaplotypeScore=127.1942;InbreedingCoeff=0.9034;MQ=87.64;MQ0=0;MQRankSum=-8.101;QD=26.45;ReadPosRankSum=0.810;VQSLOD=1.7275;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,123,4713	0/0:13,0:13:33.11:0,33,1234	0/0:29,0:29:78.25:0,78,2588	0/0:37,0:37:99:0,108,3571	1/1:2,5:6:3.01:77,3,0	1/1:1,5:6:15.05:384,15,0	1/1:1,15:16:15.05:384,15,0	0/0:39,0:38:99:0,99,3516	0/0:14,0:14:36.10:0,36,1331	0/0:25,0:25:69.24:0,69,2599	0/0:13,0:13:39.13:0,39,1373	0/0:17,0:17:45.14:0,45,1608	0/0:12,0:12:36.12:0,36,1369	0/0:16,0:16:48.16:0,48,1782	0/0:28,0:28:81.21:0,81,2980	0/0:17,0:17:48.16:0,48,1781	0/0:25,0:25:72.25:0,72,2675	0/0:24,0:24:66.23:0,66,2451	1/1:2,5:7:18.06:456,18,0	1/1:1,12:13:18.06:461,18,0	1/1:4,10:14:1.16:73,1,0	0/0:20,0:20:60.19:0,60,2119	0/0:9,0:9:27.09:0,27,912	0/0:30,0:30:90.31:0,90,3417	0/0:10,0:10:30.10:0,30,1188	0/0:25,0:25:72.25:0,72,2641	0/0:19,0:19:51.15:0,51,1874	0/0:15,0:15:45.15:0,45,1703
chr10	15508486	.	ACAGGTACGGT	A	6594.53	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=12.944;DP=638;FS=11.745;HRun=0;HaplotypeScore=192.2605;InbreedingCoeff=0.9975;MQ=84.11;MQ0=0;MQRankSum=-13.191;QD=63.41;ReadPosRankSum=1.332;VQSLOD=3.6260;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,129,6566	0/0:9,0:9:27.09:0,27,1282	0/0:25,0:25:69.24:0,69,3376	0/0:17,0:17:42.12:0,42,1810	1/1:2,13:15:33.11:1100,33,0	1/1:2,14:16:27.09:892,27,0	1/1:4,14:18:39.13:1300,39,0	0/0:40,0:40:99:0,120,5809	0/0:23,0:23:69.24:0,69,3630	0/0:36,0:36:99:0,105,5569	0/0:15,0:15:45.15:0,45,2392	0/0:26,0:26:78.27:0,78,3955	0/0:25,0:25:72.25:0,72,3466	0/0:22,0:22:66.23:0,66,3322	0/0:21,0:21:63.22:0,63,3151	0/0:21,0:21:63.20:0,63,3159	0/0:24,0:24:72.25:0,72,3670	0/0:21,0:21:63.22:0,63,3159	1/1:4,8:12:24.08:801,24,0	1/1:2,20:22:54.19:1800,54,0	1/1:7,14:21:21.54:701,22,0	0/0:35,0:35:99:0,102,5005	0/0:24,0:24:63.22:0,63,3226	0/0:22,0:22:66.23:0,66,3351	0/0:20,0:20:57.20:0,57,3016	0/0:36,0:36:99:0,105,5376	0/0:22,0:22:66.23:0,66,3230	0/0:7,0:7:21.07:0,21,1092
chr10	15508625	.	A	AC	5501.63	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=4.703;DP=641;FS=7.812;HRun=2;HaplotypeScore=79.9532;InbreedingCoeff=0.9993;MQ=72.25;MQ0=0;MQRankSum=-3.151;QD=39.87;ReadPosRankSum=0.290;VQSLOD=4.7928;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:93.22:0,93,1132	0/0:10,0:10:24.05:0,24,273	0/0:25,0:26:66.04:0,66,741	0/0:27,0:27:72.21:0,72,862	1/1:0,19:19:57:763,57,0	1/1:0,16:16:45.15:647,45,0	1/1:1,27:28:81.20:1128,81,0	0/0:36,0:36:99:0,105,1255	0/0:19,0:19:51.11:0,51,613	0/0:22,0:22:57.16:0,57,679	0/0:19,0:19:51.14:0,51,608	0/0:23,0:23:57.15:0,57,680	0/0:32,0:32:96.13:0,96,1132	0/0:13,0:13:39.12:0,39,482	0/0:14,0:14:42.05:0,42,489	0/0:17,0:17:48.14:0,48,583	0/0:39,0:39:99:0,114,1412	0/0:18,0:18:45.14:0,45,557	1/1:1,15:16:45.15:640,45,0	1/1:0,15:15:42.09:580,42,0	1/1:2,42:44:99:1744,123,0	0/0:22,0:22:66.21:0,66,815	0/0:19,0:19:51.16:0,51,632	0/0:33,0:33:84.25:0,84,1029	0/0:15,0:15:39.11:0,39,470	0/0:31,0:31:93.28:0,93,1142	0/0:23,0:23:66.20:0,66,806	0/0:10,0:10:27.08:0,27,334
chr10	15508666	.	C	CACAT	1222.65	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=5.113;DP=634;FS=3.618;HRun=0;HaplotypeScore=166.7827;InbreedingCoeff=0.9225;MQ=64.52;MQ0=8;MQRankSum=-0.838;QD=8.80;ReadPosRankSum=1.611;VQSLOD=3.1772;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:60.02:0,60,602	0/0:4,0:4:3.01:0,3,35	0/0:39,0:23:15.26:0,15,151	0/0:26,0:20:15.02:0,15,151	1/1:14,4:18:26.56:314,27,0	1/1:17,3:20:17.99:250,18,0	1/1:18,0:18:6.44:46,6,0	0/0:22,0:22:32.95:0,33,283	0/0:21,0:21:45.11:0,45,518	0/0:16,0:17:42.11:0,42,484	0/0:13,0:13:24.03:0,24,253	0/0:16,0:16:27.05:0,27,301	0/0:21,0:21:44.86:0,45,420	0/0:18,0:18:42.06:0,42,457	0/0:20,0:19:45.09:0,45,506	0/0:22,0:22:45.08:0,45,494	0/0:38,0:38:64.24:0,64,753	0/0:20,0:20:35.97:0,36,365	1/1:17,0:15:23.91:227,24,0	1/1:21,0:21:9:109,9,0	1/1:45,0:45:31.58:454,32,0	0/0:22,0:22:39.03:0,39,450	0/0:24,0:23:48.04:0,48,494	0/0:35,0:35:63.06:0,63,661	0/0:20,0:20:33.09:0,33,388	0/0:29,0:29:69.05:0,69,724	0/0:19,0:20:36.02:0,36,365	0/0:8,0:8:18.06:0,18,216
chr10	15508686	.	TAC	T	7174.94	PASS	AB=0.716;AC=38;AF=0.679;AN=56;BaseQRankSum=-8.339;DP=664;FS=9.652;HRun=0;HaplotypeScore=121.5276;InbreedingCoeff=0.6541;MQ=54.69;MQ0=35;MQRankSum=3.249;QD=14.29;ReadPosRankSum=7.830;VQSLOD=3.7064;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:17,22:37:8.19:414,8,0	0/1:2,3:5:16.85:60,0,17	0/1:29,0:12:5.96:6,0,38	0/0:14,0:9:3.01:0,3,43	0/0:19,0:19:31.12:0,31,350	0/0:21,0:21:20.98:0,21,253	0/0:17,0:17:14.99:0,15,196	1/1:15,11:25:27.20:253,27,0	1/1:9,17:20:30.97:437,31,0	1/1:5,18:22:36.93:509,37,0	0/1:9,8:16:37.06:152,0,37	1/1:5,20:22:2.93:280,3,0	1/1:14,7:20:29.11:283,29,0	1/1:3,15:17:36.10:414,36,0	1/1:5,12:16:38.77:407,39,0	0/1:5,18:22:0.62:406,0,1	1/1:16,22:35:48.08:536,48,0	1/1:8,9:16:26.91:290,27,0	0/0:20,0:18:25.32:0,25,195	0/0:23,0:24:18.01:0,18,177	0/0:47,0:47:20.61:0,21,211	1/1:8,15:19:36.10:414,36,0	1/1:8,15:21:30.08:345,30,0	1/1:15,20:35:22.46:409,22,0	1/1:7,18:22:32.90:379,33,0	1/1:13,16:26:48.08:513,48,0	1/1:9,15:23:24.54:326,25,0	1/1:0,14:14:30.09:345,30,0
chr10	15509230	.	G	GTTTT	6782.45	PASS	AB=0.857;AC=43;AF=0.768;AN=56;BaseQRankSum=-7.896;DP=600;FS=4.541;HRun=13;HaplotypeScore=124.8717;InbreedingCoeff=0.6843;MQ=47.24;MQ0=33;MQRankSum=3.709;QD=13.33;ReadPosRankSum=-3.379;VQSLOD=1.6677;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:6,15:24:21.04:355,21,0	1/1:6,6:13:18.06:369,18,0	0/1:73,0:12:2.62:3,0,81	0/1:84,0:20:0.94:1,0,113	0/0:35,0:33:61.44:0,61,617	0/0:13,0:14:31.63:0,32,310	0/0:4,0:4:8.96:0,9,102	1/1:16,15:33:53.07:853,53,0	1/1:3,0:8:6.02:122,6,0	1/1:6,7:14:30.02:466,30,0	1/1:7,8:20:34.92:538,35,0	1/1:5,7:12:16.87:228,17,0	1/1:1,6:12:12.03:194,12,0	1/1:2,7:11:9.03:172,9,0	1/1:6,12:22:12.04:221,12,0	1/1:6,9:17:27:482,27,0	1/1:9,5:15:12.01:222,12,0	1/1:3,7:12:6.02:130,6,0	0/0:22,0:20:28.41:0,28,332	0/0:16,0:16:6.32:0,6,102	1/1:12,0:8:2.90:16,3,0	1/1:4,1:5:11.34:120,11,0	1/1:5,7:12:18.04:275,18,0	0/1:2,0:6:0:0,0,0	1/1:9,10:21:21.06:338,21,0	1/1:12,12:29:49.36:822,49,0	1/1:8,9:23:35.24:575,35,0	1/1:8,5:18:0.08:281,0,0
chr10	15509255	.	T	TG	380.53	PASS	AB=0.811;AC=4;AF=0.071;AN=56;BaseQRankSum=3.094;DP=526;FS=6.146;HRun=0;HaplotypeScore=109.6095;InbreedingCoeff=0.2824;MQ=42.51;MQ0=30;MQRankSum=-3.374;QD=7.93;ReadPosRankSum=2.540;VQSLOD=3.5928;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:33.07:0,33,395	0/0:7,0:7:21.02:0,21,233	0/0:52,0:6:8.70:0,9,67	0/0:75,0:12:12.51:0,13,85	0/1:22,8:27:13.22:296,0,13	0/1:12,3:15:22.51:166,0,23	1/1:3,0:3:5.15:21,5,0	0/0:26,0:26:54.03:0,54,561	0/0:8,0:8:14.49:0,14,140	0/0:15,0:15:27:0,27,361	0/0:23,0:23:59.85:0,60,650	0/0:16,0:16:32.88:0,33,373	0/0:14,0:14:21.05:0,21,252	0/0:14,0:14:17.22:0,17,255	0/0:17,0:17:17.71:0,18,187	0/0:15,0:14:16.09:0,16,209	0/0:16,0:15:30.01:0,30,343	0/0:12,0:11:21.02:0,21,235	0/0:13,0:12:24.73:0,25,162	0/0:9,0:9:14.37:0,14,92	0/0:7,0:4:1.33:0,1,17	0/0:10,0:10:26.92:0,27,287	0/0:14,0:14:26.24:0,26,325	0/0:5,0:4:5.98:0,6,62	0/0:15,0:14:24.51:0,25,263	0/0:29,0:28:71.23:0,71,832	0/0:24,0:23:37.63:0,38,428	0/0:21,0:20:41.02:0,41,437
chr10	15509257	.	TGTTGTTG	T	830.87	PASS	AB=0.956;AC=8;AF=0.143;AN=56;BaseQRankSum=5.731;DP=497;FS=15.243;HRun=0;HaplotypeScore=133.8419;InbreedingCoeff=0.2251;MQ=46.26;MQ0=26;MQRankSum=-5.589;QD=11.23;ReadPosRankSum=-0.377;VQSLOD=1.7664;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:36.12:0,36,1004	0/0:6,0:6:8.99:0,9,373	0/0:49,0:7:8.84:0,9,149	0/0:70,0:13:15.19:0,15,199	0/1:27,0:25:99:106,0,159	0/1:14,0:14:57.20:57,0,92	0/0:2,0:2:5.38:0,5,45	0/0:22,0:22:41.79:0,42,1151	0/1:6,0:6:13.07:13,0,370	0/0:11,0:11:0.08:0,0,786	0/0:21,0:22:63.21:0,63,1858	0/0:17,0:17:39.04:0,39,930	0/0:13,0:13:21.07:0,21,637	0/0:13,0:13:24.08:0,24,739	0/0:20,0:20:5.62:0,6,649	0/0:17,0:16:12.28:0,12,608	0/0:17,0:16:30.08:0,30,951	0/0:11,0:11:21.54:0,22,569	1/1:6,4:11:13.88:437,14,0	1/1:4,3:8:2.32:274,2,0	0/1:5,0:3:31.56:78,0,32	0/0:9,0:9:27.09:0,27,848	0/0:14,0:14:30.10:0,30,942	0/0:4,0:3:6.02:0,6,197	0/0:14,0:14:20.36:0,20,644	0/0:25,0:24:42.94:0,43,1892	0/0:22,0:21:12.71:0,13,991	0/0:24,0:23:30.51:0,31,1211
chr10	15509272	.	TG	T	208.56	PASS	AB=1.000;AC=6;AF=0.107;AN=56;BaseQRankSum=6.667;DP=452;FS=0.714;HRun=1;HaplotypeScore=92.4048;InbreedingCoeff=0.5162;MQ=55.77;MQ0=12;MQRankSum=-6.688;QD=4.34;ReadPosRankSum=-2.319;VQSLOD=-0.5313;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:29.89:0,30,321	0/0:4,0:4:6.59:0,7,113	0/0:35,0:9:17.46:0,17,150	0/0:48,1:15:19.81:0,20,175	0/1:22,0:20:7.53:8,0,199	0/0:11,0:11:2.90:0,3,194	0/0:2,0:2:4.72:0,5,17	0/0:13,1:14:23.85:0,24,461	0/0:8,0:8:11.94:0,12,195	0/0:13,0:13:28.92:0,29,409	0/0:24,0:24:56.21:0,56,813	0/0:13,0:13:30.06:0,30,370	0/0:10,0:10:18.06:0,18,236	0/0:12,0:12:23.83:0,24,257	0/0:18,0:18:33.09:0,33,420	0/0:20,0:20:39.57:0,40,402	0/0:20,0:19:41.77:0,42,451	0/0:12,0:12:15.05:0,15,198	1/1:9,2:11:19.59:163,20,0	1/1:9,0:9:16.97:152,17,0	0/1:6,0:4:15.26:15,0,15	0/0:13,0:13:38.37:0,38,430	0/0:18,0:18:32.87:0,33,410	0/0:5,0:4:9.02:0,9,104	0/0:14,0:14:9.24:0,9,251	0/0:29,0:29:58.59:0,59,892	0/0:20,0:19:28.83:0,29,420	0/0:24,0:23:52.63:0,53,520
chr10	15509292	.	CT	C	764.54	PASS	AB=0.787;AC=10;AF=0.185;AN=54;BaseQRankSum=3.698;DP=448;FS=3.043;HRun=10;HaplotypeScore=85.0659;InbreedingCoeff=0.7022;MQ=56.23;MQ0=9;MQRankSum=-6.928;QD=8.99;ReadPosRankSum=-1.784;VQSLOD=2.3783;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:14:20.85:0,21,197	0/0:4,0:4:9.02:0,9,100	0/1:22,0:8:5.05:5,0,57	0/0:25,0:10:14.16:0,14,106	1/1:6,12:17:26.72:234,27,0	0/1:3,5:8:18.18:89,0,18	1/1:2,5:7:11.94:104,12,0	0/0:17,0:17:33.04:0,33,339	0/0:13,0:13:27:0,27,273	0/0:12,1:13:10.18:0,10,333	0/0:24,0:24:48.08:0,48,510	0/0:16,1:17:3.95:0,4,250	0/0:8,0:8:15.03:0,15,158	0/0:11,0:11:18:0,18,178	0/0:24,1:25:19.02:0,19,418	0/0:20,1:21:19.45:0,19,409	0/0:23,0:23:42.08:0,42,452	0/0:13,0:13:18.04:0,18,191	1/1:5,8:12:23.98:208,24,0	1/1:2,14:15:32.96:286,33,0	./.	0/0:11,0:13:32.83:0,33,319	0/0:19,0:19:16.35:0,16,345	0/0:9,0:8:15.04:0,15,166	0/0:15,0:15:27.03:0,27,285	0/0:28,0:29:59.99:0,60,643	0/0:23,0:21:48.05:0,48,497	0/0:21,1:22:18.86:0,19,356
chr10	15511693	.	T	TG	1422.29	PASS	AC=10;AF=0.185;AN=54;BaseQRankSum=2.426;DP=635;FS=3.005;HRun=2;HaplotypeScore=64.5299;InbreedingCoeff=0.9933;MQ=52.32;MQ0=14;MQRankSum=-8.885;QD=26.84;ReadPosRankSum=-1.114;VQSLOD=3.1145;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,120,1472	0/0:12,0:12:36.11:0,36,446	0/0:17,0:15:41.99:0,42,482	0/0:16,0:10:30.09:0,30,363	1/1:0,10:10:21.07:301,21,0	1/1:1,12:13:33.11:474,33,0	1/1:4,7:9:18.06:259,18,0	0/0:55,0:49:99:0,141,1729	0/0:55,0:55:99:0,144,1783	0/0:40,0:39:99:0,114,1396	0/0:19,0:19:54.17:0,54,668	0/0:20,0:20:54.17:0,54,669	0/0:11,0:11:30.09:0,30,371	0/0:24,0:24:69.22:0,69,855	0/0:23,0:22:66.21:0,66,818	0/0:41,0:39:99:0,108,1338	0/0:44,1:45:80.30:0,80,1444	0/0:32,0:30:90.28:0,90,1113	1/1:4,9:11:21.07:302,21,0	1/1:0,6:6:18.06:259,18,0	./.	0/0:12,0:12:30.09:0,30,372	0/0:8,0:8:24.08:0,24,297	0/0:13,0:13:36.11:0,36,446	0/0:17,0:17:33.10:0,33,409	0/0:33,0:33:99:0,99,1227	0/0:15,0:15:39.12:0,39,483	0/0:29,0:28:84.26:0,84,1041
chr10	15511892	.	T	TA	3803.34	PASS	AB=1.000;AC=39;AF=0.696;AN=56;BaseQRankSum=-3.924;DP=227;FS=19.856;HRun=8;HaplotypeScore=45.2791;InbreedingCoeff=0.6374;MQ=85.85;MQ0=2;MQRankSum=-0.875;QD=21.49;ReadPosRankSum=1.983;VQSLOD=2.1117;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,10:12:27.08:311,27,0	1/1:0,2:2:3.01:35,3,0	0/0:15,0:9:0.98:0,1,50	0/1:19,0:14:5.18:5,0,38	0/0:5,0:6:15.01:0,15,137	0/0:4,0:4:9:0,9,82	0/0:7,0:7:12:0,12,110	1/1:3,21:24:63.14:691,63,0	1/1:1,2:3:6.02:69,6,0	1/1:1,5:6:18.05:200,18,0	1/1:1,2:3:9.01:95,9,0	1/1:3,2:5:3.01:35,3,0	1/1:2,1:3:6.02:69,6,0	1/1:1,4:5:12.04:138,12,0	1/1:1,2:3:6.02:69,6,0	1/1:1,3:4:6.02:69,6,0	1/1:6,18:24:48.12:541,48,0	1/1:6,7:13:21.48:234,21,0	0/0:2,0:9:14.26:0,14,42	0/0:0,0:5:10.19:0,10,30	0/0:0,0:2:4.07:0,4,12	0/0:2,0:2:3:0,3,27	1/1:4,2:6:3.01:35,3,0	1/1:0,1:2:5.85:49,6,0	1/1:3,5:8:11.97:122,12,0	1/1:1,5:6:15.04:173,15,0	1/1:2,7:9:21.06:242,21,0	1/1:1,18:19:54.16:622,54,0
chr10	15511933	.	G	GTA	561.75	PASS	AB=1.000;AC=15;AF=0.417;AN=36;BaseQRankSum=0.268;DP=161;FS=7.073;HRun=0;HaplotypeScore=59.0567;InbreedingCoeff=0.5300;MQ=55.02;MQ0=2;MQRankSum=-0.553;QD=10.40;ReadPosRankSum=-0.225;VQSLOD=2.1086;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,8:14:2.96:19,3,0	0/0:1,0:1:3.01:0,3,39	./.	./.	./.	./.	0/0:1,0:1:3:0,3,25	0/0:27,0:27:57.16:0,57,714	0/0:1,0:1:3.01:0,3,38	0/0:4,0:4:9.03:0,9,116	0/0:2,0:2:3.01:0,3,39	./.	1/1:1,1:2:6.02:95,6,0	1/1:2,1:3:6.02:84,6,0	1/1:4,0:4:6.02:76,6,0	1/1:2,0:2:2.99:23,3,0	0/0:17,0:17:29.97:0,30,382	1/1:9,5:14:27.06:354,27,0	0/1:9,0:6:3.78:4,0,127	./.	./.	./.	./.	./.	1/1:4,1:5:3.01:39,3,0	0/0:5,0:5:2.83:0,3,58	0/0:10,0:10:21.07:0,21,269	0/0:16,0:16:36.11:0,36,453
chr10	15511948	.	TATAC	T	2895.08	PASS	AB=1.000;AC=36;AF=0.947;AN=38;BaseQRankSum=-1.512;DP=147;FS=0.000;HRun=0;HaplotypeScore=55.4874;InbreedingCoeff=-0.0846;MQ=48.22;MQ0=2;MQRankSum=-0.475;QD=21.61;ReadPosRankSum=-0.453;VQSLOD=3.0128;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:13:3.01:48,3,0	1/1:0,1:1:3.01:54,3,0	./.	0/1:7,0:3:1.65:12,0,2	./.	./.	./.	1/1:5,18:23:48.03:545,48,0	1/1:1,0:1:3.01:48,3,0	1/1:0,3:3:9.03:162,9,0	1/1:2,1:3:6.02:108,6,0	1/1:0,1:1:3.01:54,3,0	./.	1/1:3,1:4:9.03:143,9,0	1/1:3,0:3:6.02:83,6,0	1/1:2,0:2:3.01:54,3,0	1/1:7,9:16:29.77:446,30,0	1/1:13,1:13:20.81:258,21,0	0/1:5,0:5:10.98:11,0,84	./.	./.	./.	./.	1/1:2,0:2:3.01:47,3,0	1/1:5,0:5:6.02:90,6,0	1/1:6,1:7:13.53:153,14,0	1/1:3,5:8:21.05:327,21,0	1/1:9,6:15:31.61:342,32,0
chr10	15511954	.	TAC	T	1066.50	PASS	AB=0.979;AC=30;AF=0.789;AN=38;BaseQRankSum=4.170;DP=147;FS=7.254;HRun=0;HaplotypeScore=56.5458;InbreedingCoeff=-0.0478;MQ=53.30;MQ0=2;MQRankSum=-0.404;QD=8.20;ReadPosRankSum=5.285;VQSLOD=2.0380;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:12,0:11:2.74:12,3,0	1/1:1,0:1:2.94:18,3,0	./.	0/0:8,0:4:1.35:0,1,8	./.	./.	./.	0/1:22,0:22:39.44:269,0,39	0/1:2,0:2:6.06:6,0,30	1/1:3,0:3:8.83:54,9,0	1/1:2,0:2:5.88:36,6,0	1/1:1,0:1:2.94:18,3,0	./.	1/1:4,0:4:7.50:35,8,0	0/1:5,0:5:2.15:2,0,37	1/1:1,0:1:2.94:18,3,0	1/1:15,4:19:8.92:168,9,0	1/1:13,0:12:13.16:58,13,0	0/1:3,0:3:14.20:14,0,33	./.	./.	./.	./.	1/1:2,0:2:2.68:11,3,0	0/1:7,0:7:19.53:20,0,37	0/1:6,1:7:9.15:53,0,9	1/1:7,1:8:20.67:134,21,0	1/1:12,6:18:16.62:257,17,0
chr10	15512770	.	CT	C	2962.13	PASS	AB=0.684;AC=37;AF=0.661;AN=56;BaseQRankSum=-4.486;DP=481;FS=1.900;HRun=15;HaplotypeScore=58.6035;InbreedingCoeff=0.5130;MQ=60.68;MQ0=3;MQRankSum=2.817;QD=7.98;ReadPosRankSum=5.994;VQSLOD=2.6563;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,16:20:3.21:147,3,0	1/1:0,6:6:17.74:115,18,0	0/1:14,0:9:3.64:4,0,40	0/0:5,0:5:2.99:0,3,24	0/0:9,0:19:15.27:0,15,79	0/0:9,0:25:16.60:0,17,85	0/0:4,0:6:6.15:0,6,30	1/1:11,20:31:7.32:287,7,0	0/1:6,11:17:18.78:108,0,19	1/1:6,19:25:20.87:262,21,0	1/1:8,12:19:29.28:182,29,0	1/1:5,7:12:14.72:96,15,0	1/1:6,10:16:23.10:153,23,0	1/1:5,9:14:14.71:96,15,0	1/1:4,17:21:47.22:307,47,0	0/1:4,7:12:3.65:98,0,4	1/1:6,20:26:14.99:224,15,0	0/1:10,13:23:29.97:145,0,30	0/0:14,0:21:40.87:0,41,218	0/0:7,0:17:11.98:0,12,63	0/0:1,0:10:11.40:0,11,58	1/1:2,10:12:20.61:132,21,0	1/1:5,6:11:10.58:75,11,0	1/1:4,5:9:11.48:77,11,0	1/1:7,13:20:6.08:166,6,0	1/1:4,8:14:5.83:124,6,0	0/1:7,16:24:9.98:153,0,10	1/1:6,15:20:23.58:200,24,0
chr10	15512970	.	A	AT	5281.54	PASS	AB=0.677;AC=43;AF=0.768;AN=56;BaseQRankSum=-7.668;DP=444;FS=11.986;HRun=11;HaplotypeScore=58.3281;InbreedingCoeff=0.6205;MQ=70.28;MQ0=12;MQRankSum=0.077;QD=15.96;ReadPosRankSum=4.704;VQSLOD=4.6254;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:9,21:24:21.86:401,22,0	1/1:2,0:2:3.01:30,3,0	0/0:30,1:20:28.98:0,29,202	0/0:32,0:18:4.94:0,5,38	1/1:9,4:13:20.81:169,21,0	1/1:3,9:12:26.89:257,27,0	1/1:3,8:11:26.53:230,27,0	1/1:12,19:27:10.61:458,11,0	1/1:0,9:8:18.04:183,18,0	1/1:1,6:6:15.02:146,15,0	1/1:2,9:10:27.05:272,27,0	1/1:0,12:11:18.04:183,18,0	1/1:2,3:5:12.01:115,12,0	1/1:4,6:8:19.27:179,19,0	0/1:1,10:9:8.20:107,0,8	1/1:2,9:12:3.66:204,4,0	1/1:17,24:38:62.12:694,62,0	1/1:5,15:17:18.68:356,19,0	0/0:27,1:28:58.77:0,59,447	0/1:10,1:11:6.56:7,0,138	0/0:11,0:10:22.94:0,23,168	1/1:2,4:6:12.02:122,12,0	0/0:8,0:8:20.92:0,21,162	1/1:5,10:13:28.13:261,28,0	0/1:4,9:12:22.43:159,0,22	1/1:2,11:10:24.05:244,24,0	1/1:2,14:17:12.19:268,12,0	1/1:4,7:11:24.04:238,24,0
chr10	15513730	.	AT	A	6461.55	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=14.817;DP=680;FS=0.320;HRun=2;HaplotypeScore=77.2496;InbreedingCoeff=0.9997;MQ=84.79;MQ0=0;MQRankSum=-5.079;QD=36.10;ReadPosRankSum=0.848;VQSLOD=5.3056;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,123,1793	0/0:14,0:14:39.13:0,39,581	0/0:18,0:18:54.12:0,54,743	0/0:24,0:24:60.19:0,60,873	1/1:0,27:27:78.25:1003,78,0	1/1:0,27:27:72.23:934,72,0	1/1:0,19:19:54.17:696,54,0	0/0:32,0:32:90.25:0,90,1289	0/0:9,0:9:27.07:0,27,383	0/0:32,0:32:96.26:0,96,1391	0/0:28,0:28:81.26:0,81,1192	0/0:26,0:26:78.26:0,78,1168	0/0:14,0:14:42.13:0,42,609	0/0:19,0:19:57.09:0,57,824	0/0:23,0:23:69.20:0,69,976	0/0:18,0:18:54.15:0,54,785	0/0:40,0:40:99:0,117,1748	0/0:11,0:11:33.09:0,33,466	1/1:1,30:31:90.26:1137,90,0	1/1:0,35:35:99:1250,102,0	1/1:1,39:40:99:1440,111,0	0/0:27,0:27:78.26:0,78,1149	0/0:22,0:22:66.20:0,66,952	0/0:26,0:26:75.23:0,75,1100	0/0:19,0:19:54.18:0,54,808	0/0:20,0:20:60.19:0,60,869	0/0:26,0:25:78.26:0,78,1163	0/0:12,0:12:36.09:0,36,515
chr10	15514208	.	TTTC	T	1113.71	PASS	AB=0.800;AC=6;AF=0.107;AN=56;BaseQRankSum=7.404;DP=532;FS=6.189;HRun=0;HaplotypeScore=78.7481;InbreedingCoeff=0.6118;MQ=60.89;MQ0=6;MQRankSum=-0.759;QD=18.26;ReadPosRankSum=-0.842;VQSLOD=2.7737;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,108,1925	0/0:8,0:8:21:0,21,308	0/0:27,0:11:11.51:0,12,130	0/0:13,0:4:1.45:0,1,15	0/0:20,0:20:41.93:0,42,437	0/0:16,0:16:36.31:0,36,506	0/0:14,0:14:38.95:0,39,458	0/0:41,0:41:99:0,113,1684	0/0:9,0:9:22.86:0,23,368	0/0:32,0:32:96.21:0,96,1509	0/0:23,0:23:69.09:0,69,1094	0/0:20,0:20:53.86:0,54,736	0/0:11,0:11:30.02:0,30,439	0/0:13,0:13:39.01:0,39,582	0/0:14,0:14:35.95:0,36,494	0/0:15,0:15:42.11:0,42,741	0/0:27,0:27:75.07:0,75,1169	0/0:23,0:23:60.06:0,60,903	1/1:5,13:18:38.81:449,39,0	1/1:5,21:25:53.64:660,54,0	0/1:3,6:9:13.55:132,0,14	0/1:8,0:8:4.08:4,0,298	0/0:15,0:15:38.99:0,39,643	0/0:16,0:15:36.05:0,36,588	0/0:13,0:13:39.04:0,39,635	0/0:15,0:15:42.09:0,42,644	0/0:14,0:14:39.05:0,39,584	0/0:28,0:27:78.11:0,78,1135
chr10	15514209	.	TTC	T	814.67	PASS	AB=0.900;AC=5;AF=0.089;AN=56;BaseQRankSum=8.418;DP=526;FS=9.086;HRun=0;HaplotypeScore=69.3267;InbreedingCoeff=0.7266;MQ=60.65;MQ0=6;MQRankSum=-1.069;QD=15.67;ReadPosRankSum=-0.073;VQSLOD=2.5226;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,121,1637	0/0:7,0:7:21.04:0,21,271	0/0:26,0:10:15.88:0,16,119	0/0:13,0:4:5.03:0,5,21	0/0:20,0:20:41.96:0,42,385	0/0:16,0:16:39.66:0,40,410	0/0:14,0:14:38.93:0,39,382	0/0:42,0:42:99:0,116,1418	0/0:8,0:8:11.27:0,11,298	0/0:32,0:32:96.07:0,96,1244	0/0:23,0:23:68.97:0,69,912	0/0:19,0:19:53.69:0,54,636	0/0:11,0:11:30.01:0,30,381	0/0:13,0:13:39.07:0,39,508	0/0:14,0:14:35.67:0,36,406	0/0:15,0:15:42.10:0,42,606	0/0:26,0:26:75.05:0,75,979	0/0:23,0:23:60.07:0,60,769	1/1:16,2:18:38.31:360,38,0	1/1:22,3:24:52.57:465,53,0	0/1:8,1:9:14.76:119,0,15	0/0:8,0:8:15.71:0,16,264	0/0:15,0:15:36.98:0,37,524	0/0:16,0:15:36.05:0,36,488	0/0:13,0:13:39.06:0,39,544	0/0:15,0:15:42.08:0,42,553	0/0:14,0:14:38.98:0,39,479	0/0:27,0:26:78.09:0,78,963
chr10	15515431	.	GACACAC	G	3469.91	PASS	AB=0.871;AC=42;AF=0.808;AN=52;BaseQRankSum=1.826;DP=479;FS=10.401;HRun=0;HaplotypeScore=99.6106;InbreedingCoeff=0.2805;MQ=64.20;MQ0=8;MQRankSum=-0.487;QD=9.48;ReadPosRankSum=2.029;VQSLOD=1.6346;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:22,13:36:12.51:223,13,0	1/1:2,2:4:3.48:61,3,0	./.	./.	0/0:10,4:13:0:0,0,0	1/1:11,8:19:15.05:302,15,0	1/1:15,8:22:6.02:121,6,0	0/0:20,0:20:3.01:0,3,74	1/1:11,6:24:30.08:513,30,0	1/1:12,1:12:2.32:43,2,0	1/1:5,7:12:0.47:1,0,0	1/1:11,6:17:9.03:181,9,0	1/1:6,6:13:12.04:223,12,0	1/1:7,1:9:5.23:68,5,0	1/1:11,6:19:18.05:310,18,0	1/1:9,6:17:11.71:189,12,0	1/1:22,1:29:15.05:243,15,0	1/1:6,2:6:5.24:119,5,0	0/0:19,0:19:3.48:0,3,41	0/1:13,0:17:16.85:17,0,72	0/0:22,0:28:2.13:0,2,40	1/1:4,5:8:3.95:62,4,0	0/1:13,0:14:35.70:36,0,87	1/1:19,7:26:6.01:86,6,0	1/1:9,4:14:2.26:96,2,0	1/1:16,0:15:7.73:112,8,0	1/1:9,10:20:18.06:344,18,0	1/1:4,2:5:6.02:121,6,0
chr10	15515696	.	C	CCCTTCTTTCCTTCTTT	6302.37	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-4.480;DP=738;FS=12.836;HRun=0;HaplotypeScore=277.7386;InbreedingCoeff=0.9497;MQ=67.18;MQ0=3;MQRankSum=-5.196;QD=41.46;ReadPosRankSum=-3.474;VQSLOD=2.2484;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:90.73:0,91,3378	0/0:9,0:9:24.08:0,24,1053	0/0:33,0:21:13.89:0,14,346	0/0:37,0:26:18.91:0,19,614	1/1:5,14:26:26.92:1282,27,0	1/1:4,7:14:6.02:458,6,0	1/1:25,0:21:39.13:1231,39,0	0/0:50,0:50:84.22:0,84,2469	0/0:31,0:31:72.21:0,72,2713	0/0:24,0:24:60.19:0,60,2134	0/0:11,0:11:30.10:0,30,1162	0/0:34,0:34:69.20:0,69,2223	0/0:13,0:13:26.79:0,27,800	0/0:28,0:28:78.25:0,78,3009	0/0:25,0:25:66.23:0,66,2597	0/0:43,0:43:99:0,111,4462	0/0:34,0:33:87.28:0,87,3517	0/0:20,0:20:42.55:0,43,1438	1/1:17,14:30:45.13:1856,45,0	1/1:8,15:27:26.78:1117,27,0	1/1:10,10:23:6.02:358,6,0	0/0:16,0:16:30.10:0,30,1016	0/0:21,0:21:42.12:0,42,1403	0/0:31,0:31:78.23:0,78,3099	0/0:14,0:14:36.12:0,36,1413	0/0:33,0:33:87.26:0,87,3283	0/0:18,0:18:42.14:0,42,1606	0/0:20,0:20:42.14:0,42,1518
chr10	15515715	.	T	TTC	532.43	PASS	AB=0.940;AC=5;AF=0.089;AN=56;BaseQRankSum=3.787;DP=705;FS=11.739;HRun=0;HaplotypeScore=97.8910;InbreedingCoeff=-0.1034;MQ=67.85;MQ0=3;MQRankSum=-6.453;QD=5.22;ReadPosRankSum=-1.617;VQSLOD=1.7718;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,102,1521	0/0:8,0:8:24.08:0,24,367	0/0:32,0:21:59.91:0,60,795	0/0:34,0:21:4.56:0,5,607	0/1:18,0:18:74.60:75,0,323	0/1:15,0:14:16.42:16,0,294	0/1:22,11:29:99:442,0,630	0/0:44,0:44:99:0,125,1875	0/0:29,0:29:81.28:0,81,1240	0/0:26,0:26:78.25:0,78,1155	0/0:13,0:13:39.13:0,39,579	0/0:32,0:32:84.29:0,84,1281	0/0:13,0:13:35.86:0,36,545	0/0:30,0:30:87.30:0,87,1331	0/0:35,0:35:99:0,105,1565	0/0:43,0:43:99:0,126,1929	0/0:37,0:36:99:0,105,1580	0/0:20,0:20:51.17:0,51,781	0/1:18,1:14:62.42:62,0,400	0/1:17,0:17:54.14:54,0,276	0/0:13,0:12:21.05:0,21,286	0/0:12,0:12:36.12:0,36,551	0/0:26,0:26:66.20:0,66,969	0/0:33,0:33:93.30:0,93,1402	0/0:18,0:18:51.17:0,51,779	0/0:35,0:35:99:0,102,1498	0/0:17,0:17:51.17:0,51,781	0/0:15,0:15:42.14:0,42,641
chr10	15516065	.	GGGCACACTA	G	1409.74	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=7.548;DP=727;FS=5.618;HRun=0;HaplotypeScore=194.3548;InbreedingCoeff=0.9856;MQ=89.63;MQ0=0;MQRankSum=-5.881;QD=20.14;ReadPosRankSum=-1.416;VQSLOD=2.3878;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:90.31:0,90,3979	0/0:13,0:13:30.10:0,30,1357	0/0:29,0:29:66.20:0,66,2188	0/0:28,0:28:39.13:0,39,1317	0/0:32,0:32:87.28:0,87,3675	0/0:12,0:12:21.07:0,21,879	0/0:22,0:22:36.12:0,36,1567	0/0:26,0:26:60.15:0,60,2076	0/0:38,0:38:90.31:0,90,3520	0/0:24,0:24:51.18:0,51,2259	0/0:22,0:22:51.17:0,51,2143	0/0:26,0:26:63.22:0,63,2610	0/0:23,0:23:63.16:0,63,2616	0/0:27,0:27:51.17:0,51,2240	0/0:42,0:42:93.32:0,93,4013	0/0:37,0:37:84.27:0,84,3659	0/0:28,0:28:69.24:0,69,3136	0/0:15,0:14:42.14:0,42,1869	1/1:6,8:14:21.07:469,21,0	1/1:12,16:28:33.03:752,33,0	1/1:12,16:27:12.04:328,12,0	0/0:28,0:28:69.24:0,69,2947	0/0:30,0:30:63.22:0,63,2564	0/0:26,0:26:51.13:0,51,2129	0/0:23,0:23:54.16:0,54,2118	0/0:24,0:24:51.17:0,51,2262	0/0:30,0:29:63.22:0,63,2594	0/0:13,0:13:36.12:0,36,1660
chr10	15517394	.	AAAAAAAG	A	1726.95	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=9.442;DP=481;FS=0.000;HRun=0;HaplotypeScore=103.9211;InbreedingCoeff=0.8497;MQ=60.50;MQ0=26;MQRankSum=-8.368;QD=19.85;ReadPosRankSum=-0.371;VQSLOD=2.7044;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:78.24:0,78,2661	0/0:9,0:9:20.56:0,21,626	0/1:22,0:7:17.60:18,0,134	0/0:37,0:10:12.02:0,12,223	1/1:5,8:13:20.97:372,21,0	1/1:6,8:13:33.07:641,33,0	1/1:6,4:10:17.95:315,18,0	0/0:21,0:20:45.60:0,46,1386	0/0:17,0:17:33.08:0,33,892	0/0:20,0:20:48.15:0,48,1412	0/0:16,0:12:30.10:0,30,913	0/0:15,0:15:39.10:0,39,1077	0/0:13,0:13:30.09:0,30,927	0/0:16,0:16:36.11:0,36,1067	0/0:15,0:15:27.08:0,27,853	0/0:19,0:18:42.13:0,42,1352	0/0:16,0:16:39.10:0,39,1276	0/0:20,0:19:45.10:0,45,1268	1/1:10,3:8:6.56:214,7,0	1/1:6,6:11:23.85:273,24,0	1/1:2,1:3:6:74,6,0	0/0:20,0:19:51.17:0,51,1564	0/0:22,0:22:45.61:0,46,1449	0/0:17,0:17:31.27:0,31,1318	0/0:11,0:11:24.07:0,24,761	0/0:27,0:27:69.22:0,69,2186	0/0:19,0:19:36.12:0,36,1248	0/0:13,0:13:30.10:0,30,1097
chr10	15517415	.	GA	G	1042.25	PASS	AB=0.920;AC=15;AF=0.268;AN=56;BaseQRankSum=8.062;DP=500;FS=7.592;HRun=12;HaplotypeScore=68.5599;InbreedingCoeff=0.7556;MQ=65.51;MQ0=8;MQRankSum=-5.450;QD=7.84;ReadPosRankSum=-2.911;VQSLOD=1.5705;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:26:62.94:0,63,615	0/0:6,0:6:12.02:0,12,122	0/1:28,1:11:6.78:7,0,102	0/0:29,0:12:14.97:0,15,126	1/1:0,13:14:34.88:258,35,0	1/1:5,9:13:29.72:215,30,0	1/1:4,5:9:20.77:147,21,0	0/0:32,0:35:93.11:0,93,886	0/0:11,0:11:21.04:0,21,213	0/0:22,0:23:56.94:0,57,554	0/0:21,1:21:30.86:0,31,486	0/0:18,0:18:24:0,24,228	0/0:11,0:11:20.98:0,21,195	0/1:12,1:13:2.20:2,0,156	0/0:17,0:17:24.01:0,24,243	0/0:23,0:22:42.08:0,42,422	0/0:18,0:18:48.09:0,48,481	0/0:21,0:20:16.86:0,17,351	1/1:2,14:15:22.75:259,23,0	1/1:1,10:11:28.65:201,29,0	1/1:0,7:7:17.51:116,18,0	0/1:16,3:19:27.60:28,0,282	0/0:14,1:15:18.85:0,19,371	0/0:19,0:19:45.07:0,45,449	0/0:10,0:10:24.01:0,24,233	0/0:27,0:27:66.11:0,66,659	0/0:20,0:21:47.56:0,48,469	0/0:15,0:15:38.89:0,39,372
chr10	15517482	.	GA	G	3874.25	PASS	AB=0.723;AC=43;AF=0.768;AN=56;BaseQRankSum=1.688;DP=504;FS=1.755;HRun=14;HaplotypeScore=66.1186;InbreedingCoeff=0.0700;MQ=72.30;MQ0=0;MQRankSum=-0.881;QD=8.16;ReadPosRankSum=4.269;VQSLOD=2.9369;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:4,19:24:26.12:241,0,26	1/1:1,4:5:11.90:82,12,0	0/1:13,0:9:30.35:30,0,69	0/1:16,0:13:6.66:7,0,60	1/1:11,0:21:22.70:66,23,0	1/1:1,0:18:26.97:80,27,0	1/1:2,0:20:26.47:76,26,0	1/1:9,16:25:47.38:322,47,0	1/1:4,11:16:5.07:147,5,0	1/1:4,10:14:26.66:185,27,0	0/1:11,12:23:32.19:211,0,32	1/1:7,9:16:2.42:133,2,0	1/1:1,6:7:8.90:62,9,0	1/1:4,10:14:1.91:157,2,0	1/1:5,19:25:37.82:265,38,0	0/1:6,12:18:1.13:138,0,1	1/1:6,15:23:2.41:234,2,0	1/1:7,10:17:29.62:202,30,0	0/1:20,2:23:15.37:15,0,262	0/0:11,0:13:26.65:0,27,209	0/0:12,1:16:14.89:0,15,227	1/1:4,8:12:20.76:144,21,0	1/1:5,10:15:2.76:139,3,0	1/1:7,15:23:38.16:256,38,0	0/1:3,6:9:6.03:85,0,6	1/1:17,11:29:13.69:208,14,0	0/1:7,18:25:4.29:223,0,4	0/1:8,15:24:64.12:167,0,64
chr10	15517703	.	AAAG	A	3099.34	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=8.904;DP=475;FS=8.016;HRun=0;HaplotypeScore=75.0800;InbreedingCoeff=0.9836;MQ=65.60;MQ0=2;MQRankSum=-1.117;QD=33.33;ReadPosRankSum=1.211;VQSLOD=3.7927;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:72.62:0,73,1434	0/0:5,0:4:12.02:0,12,201	0/0:11,0:8:18.76:0,19,186	0/0:8,0:7:12.04:0,12,250	1/1:0,12:12:30.10:475,30,0	1/1:1,22:23:47.65:739,48,0	1/1:0,10:10:21.07:340,21,0	0/0:30,0:28:81.18:0,81,1535	0/0:17,0:17:39.11:0,39,790	0/0:18,0:18:54.14:0,54,1025	0/0:23,0:23:66.22:0,66,1379	0/0:18,0:18:42.14:0,42,866	0/0:15,0:15:42.11:0,42,796	0/0:8,0:8:21.06:0,21,437	0/0:21,0:21:60.16:0,60,1221	0/0:14,0:14:33.10:0,33,698	0/0:16,0:16:48.15:0,48,1016	0/0:24,0:24:56.67:0,57,1046	1/1:1,22:23:69.16:966,69,0	1/1:0,8:8:23.97:328,24,0	1/1:0,17:16:27.08:439,27,0	0/0:17,0:17:51.13:0,51,992	0/0:18,0:18:51.02:0,51,1033	0/0:12,0:12:36.10:0,36,762	0/0:10,0:10:30.10:0,30,619	0/0:28,0:28:84.26:0,84,1788	0/0:27,0:27:72.24:0,72,1556	0/0:12,0:12:35.76:0,36,499
chr10	15518381	.	A	AT	6048.16	PASS	AB=0.723;AC=29;AF=0.518;AN=56;BaseQRankSum=-5.908;DP=750;FS=6.561;HRun=12;HaplotypeScore=82.0026;InbreedingCoeff=-0.1005;MQ=59.57;MQ0=4;MQRankSum=0.281;QD=9.36;ReadPosRankSum=-1.980;VQSLOD=3.6305;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:52,19:72:99:260,0,621	0/1:3,4:7:6.88:102,0,7	0/0:14,0:12:3.86:0,4,28	0/0:5,0:4:2.82:0,3,14	1/1:9,21:29:44.94:416,45,0	1/1:6,14:20:1.21:325,1,0	0/1:8,21:28:14.22:348,0,14	1/1:17,17:37:2.44:391,2,0	1/1:9,19:30:35.06:474,35,0	1/1:16,23:40:29.15:433,29,0	0/1:11,11:21:26.77:234,0,27	0/1:19,3:22:25.57:26,0,164	0/0:24,1:26:4.01:0,4,285	0/1:22,1:23:3.40:3,0,296	0/1:18,5:24:37.69:38,0,241	0/1:31,5:38:28.17:28,0,462	1/1:11,45:56:57.09:995,57,0	0/0:12,0:11:20.81:0,21,151	0/1:16,12:30:12.29:365,0,12	1/1:9,18:27:4.15:336,4,0	0/1:15,20:34:17.78:322,0,18	0/0:15,0:16:31.84:0,32,225	0/0:13,1:16:1.55:0,2,150	0/1:16,13:31:99:176,0,173	0/0:13,1:14:3.63:0,4,190	1/1:21,21:43:3.34:501,3,0	0/1:6,15:21:27.92:227,0,28	0/1:2,5:7:12.89:49,0,13
chr10	15519685	.	G	GT	1076.23	PASS	AB=0.933;AC=7;AF=0.125;AN=56;BaseQRankSum=-4.231;DP=485;FS=9.142;HRun=6;HaplotypeScore=47.6999;InbreedingCoeff=0.8520;MQ=66.80;MQ0=1;MQRankSum=-1.695;QD=19.57;ReadPosRankSum=-1.252;VQSLOD=2.0869;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:69.15:0,69,703	0/0:7,0:7:18.04:0,18,184	0/1:13,1:14:6.69:7,0,231	0/0:17,0:14:23.92:0,24,288	0/0:9,0:9:18.03:0,18,183	0/0:10,0:10:24.05:0,24,245	0/0:12,0:12:33.07:0,33,335	0/0:33,0:33:84.12:0,84,839	0/0:15,0:15:39.05:0,39,383	0/0:18,0:18:48.08:0,48,478	0/0:20,0:20:54.08:0,54,535	0/0:24,0:24:72.16:0,72,734	0/0:6,0:6:18.04:0,18,184	0/0:20,0:20:49.99:0,50,517	0/0:20,0:20:54.09:0,54,532	0/0:22,0:22:60.11:0,60,603	0/0:23,0:23:63.14:0,63,642	0/0:25,0:25:63.14:0,63,641	1/1:4,10:13:30.09:365,30,0	1/1:1,7:8:21.02:246,21,0	1/1:1,18:19:48.15:604,48,0	0/0:13,0:13:33.05:0,33,329	0/0:10,0:10:24.05:0,24,243	0/0:26,0:26:66.63:0,67,700	0/0:11,0:11:33.07:0,33,335	0/0:25,0:25:63.13:0,63,637	0/0:27,0:27:75.17:0,75,765	0/0:12,0:12:33.07:0,33,337
chr10	15519949	.	G	GAA	1028.99	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=2.981;DP=465;FS=8.745;HRun=12;HaplotypeScore=83.8077;InbreedingCoeff=0.8808;MQ=58.66;MQ0=24;MQRankSum=-3.963;QD=14.49;ReadPosRankSum=-1.327;VQSLOD=1.8075;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:36.63:0,37,388	0/0:12,0:12:27:0,27,249	0/0:11,0:7:12.09:0,12,83	0/0:8,0:6:8.58:0,9,64	1/1:5,10:16:21.10:237,21,0	1/1:8,5:13:30.11:324,30,0	1/1:4,1:5:9.02:109,9,0	0/0:24,0:23:31.84:0,32,288	0/0:15,0:15:35.36:0,35,300	0/0:15,0:12:27.01:0,27,245	0/0:18,0:18:2.66:0,3,234	0/0:11,0:11:23.38:0,23,210	0/0:17,0:16:11.75:0,12,173	0/0:17,0:16:32.83:0,33,290	0/0:9,0:7:14.98:0,15,132	0/0:8,0:8:20.75:0,21,174	0/0:22,0:22:35.23:0,35,298	0/0:28,0:28:46.31:0,46,417	1/1:1,1:8:9.54:117,10,0	1/1:15,1:21:41.27:343,41,0	1/1:5,0:6:9.44:75,9,0	0/0:13,0:13:7.48:0,7,224	0/0:10,0:10:16.78:0,17,128	0/0:18,0:17:33.26:0,33,296	0/0:24,0:25:42.92:0,43,447	0/0:27,1:28:17.09:0,17,525	0/0:21,0:19:35.24:0,35,305	0/0:22,0:21:37.64:0,38,310
chr10	15520001	.	C	CT	8107.89	PASS	AB=0.571;AC=51;AF=0.911;AN=56;BaseQRankSum=-3.708;DP=445;FS=4.662;HRun=11;HaplotypeScore=75.7862;InbreedingCoeff=0.4044;MQ=61.50;MQ0=0;MQRankSum=0.364;QD=18.94;ReadPosRankSum=1.117;VQSLOD=6.0026;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,27:33:48.87:667,49,0	1/1:0,8:8:18.04:183,18,0	0/0:10,0:9:0.49:0,0,64	0/0:7,0:5:1.95:0,2,57	1/1:15,0:15:23.68:157,24,0	1/1:16,0:16:2.82:180,3,0	1/1:2,0:2:5.88:36,6,0	1/1:11,20:31:31.80:480,32,0	1/1:3,10:13:36.02:349,36,0	1/1:7,12:19:15.84:342,16,0	1/1:5,16:21:22.33:393,22,0	0/1:2,6:8:5.20:134,0,5	1/1:3,7:10:15.03:152,15,0	1/1:3,9:13:20.88:197,21,0	1/1:1,10:11:24.05:244,24,0	1/1:3,10:14:9.66:265,10,0	1/1:4,26:30:37.64:582,38,0	1/1:4,12:16:6.83:251,7,0	1/1:2,4:6:15.02:148,15,0	1/1:6,15:22:50.53:480,51,0	1/1:1,3:4:9.02:91,9,0	1/1:2,10:12:33.06:330,33,0	1/1:1,12:13:27.05:274,27,0	1/1:4,11:15:27.05:274,27,0	1/1:8,18:26:28.83:466,29,0	1/1:10,20:30:54.09:541,54,0	1/1:3,19:22:51.10:518,51,0	1/1:3,15:18:18.85:372,19,0
chr10	15520012	.	T	TA	1552.46	PASS	AB=1.000;AC=32;AF=0.571;AN=56;BaseQRankSum=6.477;DP=436;FS=0.944;HRun=2;HaplotypeScore=91.7884;InbreedingCoeff=-0.4088;MQ=61.69;MQ0=0;MQRankSum=0.209;QD=3.74;ReadPosRankSum=9.811;VQSLOD=-0.5077;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:34,0:34:75.97:76,0,89	0/1:8,0:8:11.01:11,0,13	0/0:11,0:10:8.48:0,8,176	0/0:10,0:8:12.78:0,13,146	1/1:5,10:15:38.82:402,39,0	1/1:4,13:17:44.97:512,45,0	1/1:0,2:2:6.02:78,6,0	0/1:30,0:30:16.04:16,0,205	0/1:15,0:15:20.57:21,0,58	0/1:16,0:16:4.14:4,0,101	0/1:19,0:19:27.74:28,0,86	0/1:8,0:8:10.86:11,0,49	1/1:7,0:7:6.39:18,6,0	0/1:13,0:13:7.31:7,0,54	1/1:10,0:10:10.91:32,11,0	0/1:14,0:14:12.54:13,0,76	0/1:30,0:30:60.33:60,0,73	0/1:16,0:16:26.73:27,0,55	0/1:7,0:7:6.38:21,0,6	0/1:25,0:25:99:110,0,103	0/1:4,0:4:9.36:18,0,9	0/1:12,0:12:5.22:36,0,5	1/1:13,0:13:13.50:39,13,0	0/1:13,0:13:28.08:29,0,28	0/1:21,0:21:27.04:27,0,61	0/1:26,0:26:23.48:23,0,97	0/1:22,0:22:35.75:47,0,36	0/1:18,0:18:47.89:48,0,53
chr10	15520017	.	C	CATTT	4021.87	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=0.547;DP=432;FS=1.077;HRun=0;HaplotypeScore=106.3821;InbreedingCoeff=0.9546;MQ=61.30;MQ0=0;MQRankSum=-9.852;QD=53.62;ReadPosRankSum=-1.226;VQSLOD=4.4820;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:82.83:0,83,1364	0/0:8,0:8:21.06:0,21,328	0/0:13,0:12:13.85:0,14,347	0/0:10,0:8:20.75:0,21,282	1/1:5,12:17:39.10:784,39,0	1/1:4,11:15:36.12:881,36,0	1/1:3,0:3:6.02:95,6,0	0/0:26,0:26:57.19:0,57,996	0/0:14,0:14:36.11:0,36,592	0/0:16,0:16:48.16:0,48,818	0/0:17,0:17:48.16:0,48,808	0/0:7,0:7:15.05:0,15,247	0/0:7,0:7:19.30:0,19,295	0/0:12,0:12:27.06:0,27,397	0/0:10,0:10:24.08:0,24,427	0/0:17,0:17:45.13:0,45,717	0/0:28,0:28:75.21:0,75,1237	0/0:15,0:15:30.10:0,30,508	1/1:3,5:11:24.07:511,24,0	1/1:7,17:24:69.20:1521,69,0	1/1:2,2:5:9.03:230,9,0	0/0:11,0:11:30.10:0,30,517	0/0:13,0:13:28.34:0,28,514	0/0:13,0:13:36.12:0,36,602	0/0:21,0:21:54.18:0,54,936	0/0:25,0:25:60.19:0,60,975	0/0:25,0:25:65.59:0,66,1097	0/0:18,0:18:46.04:0,46,751
chr10	15521291	.	T	TCCTA	9106.01	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-12.399;DP=688;FS=2.132;HRun=0;HaplotypeScore=105.0572;InbreedingCoeff=0.9936;MQ=88.06;MQ0=0;MQRankSum=-4.053;QD=61.11;ReadPosRankSum=-0.392;VQSLOD=6.3549;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,126,2306	0/0:9,0:9:27.09:0,27,504	0/0:24,0:24:54.17:0,54,919	0/0:26,0:26:69.20:0,69,1202	1/1:4,20:25:48.12:1132,48,0	1/1:3,25:28:69.24:1798,69,0	1/1:6,23:29:78.22:1993,78,0	0/0:41,0:41:99:0,105,1929	0/0:32,0:32:87.30:0,87,1605	0/0:27,0:27:75.26:0,75,1391	0/0:20,0:20:60.19:0,60,1080	0/0:24,0:24:69.21:0,69,1216	0/0:18,0:18:51.16:0,51,920	0/0:19,0:19:54.19:0,54,997	0/0:31,0:31:90.31:0,90,1680	0/0:32,0:32:96.33:0,96,1792	0/0:16,0:16:45.13:0,45,794	0/0:24,0:24:66.23:0,66,1232	1/1:5,15:22:57.16:1307,57,0	1/1:3,19:24:60.21:1596,60,0	1/1:2,18:21:48.16:1280,48,0	0/0:17,0:17:48.15:0,48,851	0/0:16,0:16:48.15:0,48,845	0/0:37,0:37:99:0,108,1940	0/0:18,0:18:48.16:0,48,896	0/0:32,0:32:93.32:0,93,1736	0/0:26,0:26:72.25:0,72,1344	0/0:5,0:5:12.04:0,12,224
chr10	15522719	.	T	TACACACAC	6886.63	PASS	AB=0.929;AC=41;AF=0.759;AN=54;BaseQRankSum=-5.248;DP=534;FS=2.579;HRun=0;HaplotypeScore=157.7827;InbreedingCoeff=0.4881;MQ=64.92;MQ0=4;MQRankSum=0.689;QD=16.20;ReadPosRankSum=-2.012;VQSLOD=3.4872;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:20,7:29:2.84:122,3,0	1/1:8,0:8:12:226,12,0	0/0:22,0:16:3.01:0,3,38	0/1:26,0:19:0:0,0,0	0/0:20,0:20:9.03:0,9,153	0/0:17,0:17:18.05:0,18,307	0/0:14,0:14:3.01:0,3,56	1/1:28,0:28:18.04:316,18,0	1/1:11,0:16:9.03:313,9,0	1/1:23,0:23:39.13:778,39,0	1/1:11,0:18:3.90:104,4,0	1/1:12,6:19:11.96:412,12,0	1/1:5,7:15:13.60:475,14,0	1/1:10,5:16:12.04:490,12,0	1/1:15,8:26:2.23:122,2,0	1/1:14,8:23:14.84:613,15,0	0/1:23,0:22:29.35:518,0,29	1/1:10,0:10:3.01:39,3,0	1/1:12,0:12:15.05:247,15,0	1/1:16,0:16:14.98:266,15,0	1/1:22,0:22:9.02:118,9,0	0/1:19,5:24:0:0,0,0	./.	0/0:16,8:26:2.65:0,3,47	1/1:18,0:17:4.94:113,5,0	1/1:23,0:23:54.16:1196,54,0	1/1:14,0:21:9.03:314,9,0	1/1:1,0:4:3.01:104,3,0
chr10	15522741	.	CACACACACACACACATAT	C	1635.38	PASS	AB=0.848;AC=7;AF=0.125;AN=56;BaseQRankSum=3.376;DP=548;FS=0.000;HRun=0;HaplotypeScore=205.2134;InbreedingCoeff=0.4595;MQ=49.72;MQ0=8;MQRankSum=-3.591;QD=17.40;ReadPosRankSum=0.960;VQSLOD=2.5879;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:34:31.08:0,31,1167	0/0:8,0:8:15.03:0,15,980	0/0:18,0:10:26.87:0,27,1003	0/0:26,0:16:39.46:0,39,1370	1/1:3,23:25:12.04:532,12,0	1/1:1,15:16:21.07:979,21,0	0/1:3,15:18:9.73:148,0,10	0/0:29,0:29:81.16:0,81,2792	0/0:17,0:17:18.06:0,18,855	0/0:20,0:19:51.16:0,51,2845	0/0:17,0:17:9.03:0,9,538	0/0:16,0:16:6.26:0,6,693	0/0:17,0:17:33.11:0,33,1593	0/0:17,0:17:15.05:0,15,859	0/0:21,0:21:14.44:0,14,845	0/0:21,0:21:39.03:0,39,2087	0/0:21,0:20:33.88:0,34,1327	0/0:10,0:10:24.08:0,24,976	0/1:13,0:12:47.02:47,0,985	0/1:21,0:20:67.95:68,0,1011	0/0:26,0:26:22.48:0,22,1918	0/0:21,0:19:18.03:0,18,543	0/0:12,0:12:18.06:0,18,641	0/0:28,0:28:26.40:0,26,1050	0/0:18,0:17:18.06:0,18,737	0/0:27,0:27:81.25:0,81,4853	0/0:22,0:22:42.04:0,42,1596	0/0:5,0:5:9.03:0,9,392
chr10	15522755	.	CAT	C	509.51	PASS	AB=0.900;AC=14;AF=0.250;AN=56;BaseQRankSum=7.229;DP=525;FS=0.624;HRun=0;HaplotypeScore=109.8338;InbreedingCoeff=0.7662;MQ=59.13;MQ0=8;MQRankSum=-1.690;QD=3.51;ReadPosRankSum=1.542;VQSLOD=2.2507;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:34:35.13:0,35,291	0/0:8,0:8:15.01:0,15,176	0/0:17,0:13:29.78:0,30,284	0/0:25,0:19:50.52:0,51,434	1/1:24,0:23:11.42:59,11,0	1/1:16,0:16:19.99:104,20,0	1/1:15,0:15:2.84:14,3,0	0/0:27,0:27:61.14:0,61,580	0/0:18,0:18:26.99:0,27,250	0/0:19,0:18:24.34:0,24,384	0/0:13,0:13:14.99:0,15,147	0/0:18,0:18:27.03:0,27,272	0/0:18,0:18:38.93:0,39,365	0/0:18,0:18:23.66:0,24,221	0/0:14,0:14:17.67:0,18,162	0/0:21,0:21:39.43:0,39,379	0/0:24,0:23:50.42:0,50,387	0/1:12,0:12:0.15:0,0,108	1/1:13,0:12:6.77:76,7,0	1/1:21,0:20:20.29:209,20,0	1/1:24,0:24:13.76:204,14,0	0/0:16,0:14:17.98:0,18,170	0/0:12,0:12:26.97:0,27,224	0/0:24,0:24:29.54:0,30,267	0/1:15,5:19:15.08:15,0,169	0/0:29,0:29:54.48:0,54,684	0/0:18,0:18:40.21:0,40,366	0/0:6,0:6:8.99:0,9,83
chr10	15523264	.	CTTTTTTTTTTT	C	11817.06	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=0.674;DP=433;FS=35.206;HRun=23;HaplotypeScore=150.0521;InbreedingCoeff=0.8573;MQ=56.65;MQ0=24;MQRankSum=-1.808;QD=39.13;ReadPosRankSum=4.452;VQSLOD=-0.7182;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,15:22:17.22:458,17,0	1/1:2,5:7:14.92:380,15,0	0/0:32,0:10:17.94:0,18,249	0/0:13,0:8:12.03:0,12,213	0/0:7,0:16:40.68:0,41,346	0/0:7,0:11:15.05:0,15,149	0/0:11,0:13:16.33:0,16,205	1/1:8,15:23:47.34:1080,47,0	1/1:5,7:13:1.29:373,1,0	1/1:6,15:23:50.61:1070,51,0	1/1:7,11:19:36.55:818,37,0	1/1:5,4:8:2.30:204,2,0	1/1:8,2:9:23.81:428,24,0	1/1:5,3:8:8.66:250,9,0	1/1:11,7:17:2.09:740,2,0	1/1:5,8:11:23.93:667,24,0	1/1:4,14:16:21:582,21,0	1/1:3,9:10:9.02:249,9,0	0/0:11,0:16:30.09:0,30,633	0/0:13,0:17:42.14:0,42,871	0/0:7,0:9:15.05:0,15,272	1/1:4,7:12:14.45:273,14,0	1/1:4,10:14:30.10:673,30,0	1/1:5,6:10:13.97:366,14,0	1/1:4,11:15:36.03:823,36,0	1/1:2,12:14:35.62:745,36,0	1/1:6,13:20:32.56:804,33,0	1/1:4,13:13:30.10:834,30,0
chr10	15524183	.	CT	C	4432.10	PASS	AB=0.885;AC=45;AF=0.804;AN=56;BaseQRankSum=-4.250;DP=466;FS=8.883;HRun=12;HaplotypeScore=77.9098;InbreedingCoeff=0.2590;MQ=69.23;MQ0=7;MQRankSum=2.630;QD=9.98;ReadPosRankSum=3.678;VQSLOD=3.7841;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:11,14:26:43.84:331,44,0	1/1:3,5:8:11.95:93,12,0	0/1:33,0:12:13.58:14,0,48	0/1:27,0:14:6.55:7,0,51	0/0:14,0:13:26.45:0,26,173	0/1:15,0:15:5.24:5,0,68	0/1:11,0:11:22.85:23,0,46	1/1:15,16:32:64.87:457,65,0	1/1:5,8:14:21.98:148,22,0	1/1:4,16:20:21.76:336,22,0	0/1:8,7:15:3.57:159,0,4	1/1:3,10:13:26.88:209,27,0	1/1:5,7:13:13.96:99,14,0	0/1:2,11:13:0.50:179,0,1	1/1:2,8:12:22:151,22,0	1/1:4,10:14:26.89:209,27,0	1/1:3,22:25:28.38:393,28,0	1/1:7,16:23:43.87:331,44,0	0/1:30,1:28:21.91:22,0,75	1/1:5,0:5:2.91:17,3,0	0/0:8,0:8:5.60:0,6,25	1/1:1,6:8:19.95:145,20,0	1/1:1,11:12:20.91:162,21,0	1/1:7,7:15:20.70:162,21,0	1/1:2,13:15:23.90:186,24,0	1/1:5,15:20:44.81:348,45,0	1/1:7,10:19:27.95:196,28,0	1/1:1,3:5:8.01:52,8,0
chr10	15524194	.	TTC	T	1038.30	PASS	AB=0.990;AC=17;AF=0.304;AN=56;BaseQRankSum=-4.665;DP=439;FS=14.550;HRun=0;HaplotypeScore=92.1182;InbreedingCoeff=0.3219;MQ=63.26;MQ0=12;MQRankSum=-1.905;QD=5.32;ReadPosRankSum=-1.377;VQSLOD=1.7671;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:24:38.50:0,38,187	0/0:6,0:6:1.83:0,2,13	0/1:30,0:9:19.37:19,0,31	0/1:23,0:11:29.78:30,0,54	0/1:13,1:13:5.84:60,0,6	1/1:14,0:14:31.58:225,32,0	1/1:9,0:9:7.37:121,7,0	0/1:30,0:30:19.61:20,0,161	0/1:13,0:13:15.44:15,0,34	0/0:19,0:18:29.86:0,30,136	0/0:14,0:13:21.54:0,22,140	0/0:11,0:11:18.32:0,18,72	0/0:12,0:12:13.73:0,14,90	0/0:14,0:14:11.26:0,11,76	0/0:11,0:10:6.38:0,6,46	0/0:13,0:13:26.33:0,26,125	0/0:30,0:30:21.80:0,22,171	0/0:23,0:21:11.17:0,11,87	1/1:13,14:24:22.81:488,23,0	1/1:7,0:7:2.99:24,3,0	1/1:2,7:8:6.26:182,6,0	0/0:9,0:9:3.18:0,3,17	0/0:13,0:12:13.04:0,13,67	0/0:12,0:12:23.45:0,23,113	0/0:14,0:14:15.68:0,16,63	0/0:18,0:18:26.29:0,26,128	0/1:13,0:13:19.27:22,0,19	0/1:5,0:4:2.72:3,0,7
chr10	15525314	.	C	CCCT	4206.91	PASS	AB=1.000;AC=21;AF=0.389;AN=54;BaseQRankSum=-5.072;DP=270;FS=16.265;HRun=0;HaplotypeScore=51.8225;InbreedingCoeff=0.4467;MQ=79.48;MQ0=0;MQRankSum=-1.663;QD=24.89;ReadPosRankSum=6.691;VQSLOD=1.6290;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:8,0:8:9.20:9,0,19	0/0:4,0:4:3.08:0,3,27	0/0:16,0:15:30.49:0,30,370	0/0:17,0:16:37.95:0,38,329	1/1:6,18:25:32.91:627,33,0	1/1:3,21:24:51.14:1007,51,0	1/1:1,23:26:47.78:1027,48,0	0/0:6,0:6:8.74:0,9,63	0/0:2,0:2:3:0,3,25	0/0:6,0:6:4.16:0,4,41	1/1:5,0:3:1.74:5,2,0	0/0:9,0:9:5.63:0,6,51	0/1:9,0:9:8.42:34,0,8	0/1:7,0:7:0.34:3,0,0	0/0:7,0:7:6:0,6,53	1/1:3,0:3:3.41:19,3,0	0/1:16,0:16:33.19:63,0,33	0/0:13,0:13:16.50:0,16,141	1/1:2,12:14:33.04:549,33,0	1/1:2,7:10:24.08:436,24,0	1/1:2,15:17:21.04:426,21,0	0/0:6,0:6:1.41:0,1,24	0/0:1,0:1:2.97:0,3,20	0/1:5,0:5:0.11:0,0,0	0/0:4,0:4:1.24:0,1,4	0/0:3,0:3:2.99:0,3,25	0/0:7,0:7:4.80:0,5,49	./.
chr10	15525468	.	G	GT	3971.13	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=14.572;DP=474;FS=32.544;HRun=4;HaplotypeScore=64.3286;InbreedingCoeff=0.9936;MQ=72.24;MQ0=0;MQRankSum=-2.918;QD=33.65;ReadPosRankSum=-0.472;VQSLOD=1.2480;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:90.26:0,90,1020	0/0:8,0:7:21.06:0,21,238	0/0:12,0:12:27.06:0,27,293	0/0:15,0:15:14.88:0,15,345	1/1:3,26:27:63.21:853,63,0	1/1:3,16:19:45.15:614,45,0	1/1:1,21:22:60.20:814,60,0	0/0:30,0:30:78.21:0,78,876	0/0:14,0:14:33.09:0,33,374	0/0:17,0:17:48.14:0,48,544	0/0:14,0:14:36.10:0,36,408	0/0:21,0:21:60.17:0,60,680	0/0:11,0:11:33.09:0,33,373	0/0:12,0:12:33.08:0,33,365	0/0:18,0:18:51.13:0,51,569	0/0:15,0:15:42.12:0,42,476	0/0:23,0:23:69.20:0,69,783	0/0:14,0:14:39.11:0,39,441	1/1:0,18:18:54.15:707,54,0	1/1:2,20:22:54.18:738,54,0	1/1:0,8:8:18.06:246,18,0	0/0:12,0:12:36.10:0,36,408	0/0:15,0:15:45.13:0,45,510	0/0:15,0:15:45.13:0,45,509	0/0:14,0:14:39.11:0,39,442	0/0:16,0:16:45.13:0,45,510	0/0:15,0:15:39.10:0,39,434	0/0:13,0:13:30.56:0,31,341
chr10	15525795	.	G	GA	2095.30	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=7.188;DP=480;FS=9.940;HRun=10;HaplotypeScore=57.7541;InbreedingCoeff=0.8409;MQ=61.53;MQ0=7;MQRankSum=-4.898;QD=19.22;ReadPosRankSum=-0.689;VQSLOD=3.7950;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:45:94.59:0,95,756	0/0:8,0:8:20.82:0,21,159	0/0:16,0:10:11.44:0,11,124	0/1:9,0:6:28.54:29,0,56	1/1:8,15:20:17.46:389,17,0	1/1:3,10:13:35.55:332,36,0	1/1:4,11:12:33.07:343,33,0	0/0:14,1:14:3.96:0,4,236	0/0:13,0:14:31.97:0,32,249	0/0:17,0:17:43.75:0,44,349	0/0:16,0:16:38.90:0,39,312	0/0:7,0:7:20.98:0,21,172	0/0:10,0:10:20.95:0,21,172	0/0:13,0:13:29.93:0,30,243	0/0:18,0:18:39.84:0,40,322	0/0:16,0:15:32.76:0,33,256	0/0:33,0:33:77.75:0,78,621	0/0:13,1:13:6.95:0,7,260	1/1:3,18:19:52.37:546,52,0	1/1:5,17:21:29.50:516,30,0	1/1:0,5:5:12.03:128,12,0	0/0:11,0:11:27.84:0,28,221	0/0:18,0:18:44.95:0,45,369	0/0:20,0:20:44.28:0,44,368	0/0:17,0:17:41.94:0,42,344	0/0:22,0:22:50.91:0,51,417	0/0:20,0:20:53.92:0,54,443	0/0:20,0:21:49.98:0,50,400
chr10	15525934	.	CG	C	2849.82	PASS	AB=1.000;AC=36;AF=0.900;AN=40;BaseQRankSum=-2.952;DP=267;FS=2.170;HRun=2;HaplotypeScore=41.9898;InbreedingCoeff=0.2457;MQ=41.05;MQ0=30;MQRankSum=-1.232;QD=11.73;ReadPosRankSum=1.069;VQSLOD=2.0842;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:17,1:16:29.72:220,30,0	1/1:6,0:4:8.92:65,9,0	0/0:8,0:1:2.60:0,3,10	./.	./.	./.	./.	1/1:16,2:17:36.89:264,37,0	1/1:11,0:11:9.73:64,10,0	1/1:16,0:14:33.69:261,34,0	1/1:8,0:8:7.85:57,8,0	1/1:10,0:8:17.81:143,18,0	1/1:8,0:7:17.83:135,18,0	1/1:12,1:11:26.78:198,27,0	1/1:14,0:11:32.70:240,33,0	1/1:13,0:13:35.82:282,36,0	1/1:13,2:15:7.61:146,8,0	0/1:10,0:9:4.04:97,0,4	./.	./.	./.	./.	1/1:11,0:11:16.28:132,16,0	0/1:14,0:10:5:83,0,5	1/1:2,10:12:6:60,6,0	1/1:14,0:13:29.21:220,29,0	1/1:9,0:9:14.92:115,15,0	1/1:18,0:12:24.12:161,24,0
chr10	15525935	.	GGA	G	2244.69	PASS	AB=0.945;AC=23;AF=0.523;AN=44;BaseQRankSum=0.919;DP=293;FS=66.570;HRun=0;HaplotypeScore=45.3977;InbreedingCoeff=-0.3911;MQ=42.00;MQ0=32;MQRankSum=-2.947;QD=8.22;ReadPosRankSum=8.766;VQSLOD=0.4123;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:15,1:16:1.20:193,0,1	0/1:6,0:4:7.07:45,0,7	0/0:10,0:1:2.94:0,3,18	0/1:6,0:4:0:0,0,0	./.	./.	./.	0/1:17,0:17:7.58:165,0,8	0/1:12,0:12:35.95:36,0,44	1/1:17,0:15:9.72:211,10,0	0/1:9,0:9:37.20:37,0,40	0/1:11,0:9:4.30:136,0,4	0/1:7,1:8:0.72:125,0,1	1/1:12,0:10:9.24:160,9,0	0/1:20,0:18:49.94:180,0,50	0/1:17,0:17:16.97:203,0,17	0/1:19,0:18:40.62:147,0,41	0/1:10,0:10:22.75:78,0,23	./.	./.	./.	0/0:3,0:3:5.80:0,6,33	0/1:10,0:11:0.28:118,0,0	0/1:13,1:10:34.63:74,0,35	0/1:13,1:14:36.39:39,0,36	0/1:14,1:14:5.58:189,0,6	0/1:8,1:9:34.73:88,0,35	1/1:21,0:12:20.88:149,21,0
chr10	15526704	.	CTCTCTCTCTCTCTCTCTCTCTT	C	850.10	PASS	AB=1.000;AC=13;AF=0.241;AN=54;BaseQRankSum=0.339;DP=482;FS=2.431;HRun=0;HaplotypeScore=227.5463;InbreedingCoeff=0.2091;MQ=40.89;MQ0=37;MQRankSum=-4.060;QD=4.86;ReadPosRankSum=-3.836;VQSLOD=1.6963;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:18:7.13:0,7,850	0/0:5,0:5:11.93:0,12,138	./.	0/0:15,0:2:5.88:0,6,44	0/1:19,0:15:21.43:21,0,246	0/0:26,0:22:11.94:0,12,278	0/1:21,0:18:26.10:26,0,127	0/0:26,0:22:43.94:0,44,636	0/1:28,0:24:99:132,0,558	0/0:21,0:20:60.20:0,60,1927	0/1:17,0:16:13.44:13,0,258	0/1:18,0:17:44.71:45,0,655	0/0:12,0:10:21.05:0,21,339	0/0:14,0:11:14.43:0,14,699	0/0:20,0:16:28.12:0,28,736	0/1:11,0:10:2.20:2,0,469	0/0:21,0:20:48.04:0,48,994	0/0:14,0:9:18.06:0,18,402	1/1:0,7:7:18.01:371,18,0	1/1:2,11:10:2.94:18,3,0	1/1:15,0:8:10.50:175,10,0	0/0:6,0:6:7.88:0,8,66	0/0:9,0:8:12.02:0,12,269	0/0:17,0:17:37.58:0,38,1112	0/0:21,0:20:45.08:0,45,1241	0/0:30,0:28:24.20:0,24,2312	0/1:26,0:22:99:201,0,1230	0/0:25,0:17:36.08:0,36,1087
chr10	15526728	.	C	CTT	2020.92	PASS	AB=0.821;AC=25;AF=0.481;AN=52;BaseQRankSum=3.075;DP=456;FS=1.684;HRun=3;HaplotypeScore=103.2869;InbreedingCoeff=-0.3734;MQ=37.24;MQ0=38;MQRankSum=0.668;QD=5.40;ReadPosRankSum=0.442;VQSLOD=-0.0355;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:15,5:18:99:116,0,258	1/1:2,0:2:3.01:55,3,0	./.	./.	1/1:15,0:11:9.80:144,10,0	1/1:15,2:12:8.96:71,9,0	0/1:17,0:13:5.11:85,0,5	0/0:30,0:23:58.84:0,59,379	0/1:21,6:23:20.61:245,0,21	0/1:17,3:21:99:124,0,147	0/1:11,8:18:33.46:151,0,33	0/1:12,9:18:99:162,0,153	0/1:6,7:10:38.43:38,0,88	0/1:10,7:14:99:102,0,150	0/1:15,5:16:80.25:80,0,234	0/1:5,6:10:37.70:38,0,123	0/1:22,1:21:72.52:216,0,73	0/1:11,1:9:36.14:36,0,146	1/1:10,0:9:6.39:83,6,0	0/0:14,0:11:3:0,3,25	0/1:16,0:9:14.81:32,0,15	0/0:3,0:3:6.01:0,6,64	0/0:9,3:10:9.01:0,9,91	0/1:17,1:18:99:99,0,297	0/1:21,2:21:4.21:4,0,633	0/1:19,7:25:99:243,0,230	0/1:19,5:19:52:52,0,254	0/0:22,1:16:24.18:0,24,195
chr10	15526951	.	T	TA	743.73	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=2.739;DP=383;FS=22.665;HRun=2;HaplotypeScore=38.3141;InbreedingCoeff=0.8127;MQ=52.50;MQ0=39;MQRankSum=-0.847;QD=10.62;ReadPosRankSum=-0.100;VQSLOD=-0.1360;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:21:38.93:0,39,395	0/0:1,0:1:3.01:0,3,36	0/0:13,0:3:5.68:0,6,37	0/0:17,0:4:4.09:0,4,17	1/1:6,13:15:29.98:370,30,0	1/1:7,2:9:22.21:202,22,0	1/1:2,1:3:5.85:56,6,0	0/0:40,0:36:57.92:0,58,660	0/0:7,0:6:6.02:0,6,74	0/0:12,0:11:26.96:0,27,258	0/0:18,0:15:29.92:0,30,303	0/0:8,0:6:18.04:0,18,206	0/0:7,0:5:15.04:0,15,170	0/0:6,0:6:17.95:0,18,176	0/0:12,0:10:27.04:0,27,286	0/0:9,0:7:18.01:0,18,166	0/0:27,0:25:51.40:0,51,607	0/0:23,0:20:47.93:0,48,490	1/1:21,0:14:26.60:136,27,0	1/1:10,0:9:18.60:90,19,0	1/1:7,1:5:8.01:63,8,0	0/0:4,0:4:5.99:0,6,49	0/0:5,0:4:6.01:0,6,63	0/0:8,0:8:18.02:0,18,194	0/0:15,0:14:36.98:0,37,442	0/0:24,0:18:51.01:0,51,517	0/0:16,0:13:36.08:0,36,409	0/0:18,0:16:42.02:0,42,466
chr10	15527310	.	CA	C	2391.34	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=7.786;DP=408;FS=6.197;HRun=6;HaplotypeScore=38.5577;InbreedingCoeff=0.9719;MQ=86.38;MQ0=0;MQRankSum=-0.993;QD=24.15;ReadPosRankSum=-0.394;VQSLOD=2.3801;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:87.24:0,87,1125	0/0:5,0:5:15.05:0,15,197	0/0:14,0:14:36.10:0,36,438	0/0:16,0:16:38.84:0,39,422	1/1:0,25:25:42.10:451,42,0	1/1:0,17:17:42.11:451,42,0	1/1:0,11:11:27.07:290,27,0	0/0:35,0:35:99:0,99,1302	0/0:16,0:16:42.14:0,42,553	0/0:19,0:19:57.17:0,57,734	0/0:7,0:7:18.06:0,18,236	0/0:9,0:9:27.09:0,27,355	0/0:7,0:7:21.07:0,21,276	0/0:8,0:8:24.08:0,24,316	0/0:14,0:14:36.12:0,36,473	0/0:2,0:2:6.02:0,6,79	0/0:16,0:16:45.15:0,45,592	0/0:8,0:8:24.08:0,24,316	1/1:1,15:16:45.11:483,45,0	1/1:0,12:12:36.09:387,36,0	1/1:1,17:18:48.12:516,48,0	0/0:11,0:11:30.10:0,30,390	0/0:14,0:14:42.10:0,42,534	0/0:15,0:15:45.15:0,45,590	0/0:10,0:10:27.09:0,27,354	0/0:16,0:16:48.16:0,48,631	0/0:23,0:23:66.21:0,66,866	0/0:13,0:13:39.13:0,39,513
chr10	15527425	.	T	TA	915.29	PASS	AC=10;AF=0.217;AN=46;BaseQRankSum=-3.852;DP=268;FS=1.656;HRun=0;HaplotypeScore=29.0793;InbreedingCoeff=0.6492;MQ=57.61;MQ0=26;MQRankSum=-1.164;QD=21.29;ReadPosRankSum=1.834;VQSLOD=5.0647;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:54.14:0,54,687	0/0:2,0:2:5.99:0,6,63	0/0:35,0:6:12.40:0,12,103	0/0:49,0:13:8.69:0,9,191	./.	1/1:0,13:13:30.10:415,30,0	1/1:1,1:2:3.01:42,3,0	0/0:30,0:30:87.20:0,87,1078	0/0:3,0:3:9.01:0,9,95	0/0:6,0:6:18.05:0,18,236	./.	0/0:3,0:3:9:0,9,104	0/0:1,0:1:3.01:0,3,42	0/0:2,0:2:6.02:0,6,83	./.	0/0:3,0:3:9.03:0,9,125	0/0:31,0:29:75.21:0,75,992	0/0:16,0:16:21.53:0,22,466	1/1:8,13:15:30.14:514,30,0	1/1:0,2:2:3.01:42,3,0	1/1:4,1:1:3.01:42,3,0	0/0:1,0:1:3:0,3,28	./.	./.	0/0:10,0:10:30.09:0,30,388	0/0:4,0:3:9.03:0,9,126	0/0:2,0:2:6.01:0,6,67	0/0:8,0:8:20.97:0,21,271
chr10	15527619	.	T	TTA	2631.10	PASS	AB=1.000;AC=40;AF=0.833;AN=48;BaseQRankSum=-3.497;DP=173;FS=1.227;HRun=0;HaplotypeScore=28.2612;InbreedingCoeff=0.0999;MQ=56.79;MQ0=15;MQRankSum=-0.543;QD=16.65;ReadPosRankSum=2.068;VQSLOD=3.4106;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:14,0:13:43.88:44,0,44	1/1:0,1:1:3.01:50,3,0	1/1:11,0:3:2.51:7,3,0	0/0:10,0:4:6.18:0,6,33	0/0:2,0:1:2.22:0,2,7	1/1:8,0:6:6.41:102,6,0	0/1:2,0:2:2.54:19,0,3	1/1:2,19:20:57:669,57,0	1/1:4,0:3:2.99:23,3,0	1/1:1,6:6:18.03:244,18,0	1/1:0,2:2:3.01:50,3,0	1/1:2,0:2:2.88:15,3,0	1/1:1,0:1:2.98:22,3,0	1/1:2,0:2:2.92:17,3,0	1/1:3,0:3:2.84:14,3,0	0/1:2,0:2:8.23:8,0,22	1/1:3,12:17:15.05:249,15,0	0/1:14,0:12:23.05:23,0,38	1/1:8,0:4:1.86:57,2,0	./.	1/1:3,0:1:2.99:24,3,0	./.	./.	./.	1/1:4,0:3:1.31:2,1,0	1/1:0,4:5:15.01:219,15,0	1/1:0,5:5:8.63:149,9,0	1/1:0,22:22:45.14:742,45,0
chr10	15528456	.	CATT	C	3659.12	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=11.051;DP=376;FS=0.570;HRun=0;HaplotypeScore=54.4365;InbreedingCoeff=0.9409;MQ=77.69;MQ0=0;MQRankSum=-1.337;QD=43.56;ReadPosRankSum=1.211;VQSLOD=4.4883;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:75.26:0,75,1698	0/0:2,0:2:6.02:0,6,138	0/0:16,0:16:3.94:0,4,576	0/0:6,0:6:18.06:0,18,361	1/1:1,13:14:33.11:558,33,0	1/1:0,10:10:30.10:506,30,0	1/1:0,10:10:24.08:409,24,0	0/0:27,0:27:78.26:0,78,1703	0/0:16,0:16:48.16:0,48,1107	0/0:14,0:14:39.13:0,39,858	0/0:8,0:8:21.06:0,21,418	0/0:6,0:6:18.06:0,18,414	0/0:7,0:7:21.07:0,21,482	0/0:7,0:7:15.05:0,15,346	0/0:11,0:11:33.04:0,33,677	0/0:10,0:10:30.10:0,30,692	0/0:28,0:28:81.28:0,81,1858	0/0:19,0:19:51.18:0,51,1157	1/1:2,21:23:63.16:961,63,0	1/1:0,15:15:42.14:714,42,0	1/1:0,12:12:30.10:512,30,0	0/0:15,0:15:45.15:0,45,1014	0/0:10,0:10:30.10:0,30,692	0/0:9,0:9:27.05:0,27,573	0/0:11,0:11:33.11:0,33,761	0/0:15,0:15:45.15:0,45,974	0/0:14,0:14:42.14:0,42,965	0/0:15,0:15:45.15:0,45,1038
chr10	15529127	.	TA	T	11018.33	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-0.623;DP=532;FS=1.641;HRun=10;HaplotypeScore=60.9355;InbreedingCoeff=0.8877;MQ=60.54;MQ0=0;MQRankSum=-0.812;QD=21.19;ReadPosRankSum=2.127;VQSLOD=5.9186;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,30:35:83:709,83,0	1/1:4,6:10:14.98:130,15,0	0/0:5,0:3:9.02:0,9,100	0/0:7,0:5:5.85:0,6,42	1/1:4,17:21:47.92:408,48,0	1/1:0,16:17:41.03:344,41,0	1/1:1,8:9:20.99:182,21,0	1/1:6,22:25:59.97:518,60,0	1/1:1,14:15:38.98:338,39,0	1/1:5,27:32:80.93:692,81,0	1/1:5,13:18:35.98:312,36,0	1/1:3,18:21:44.99:391,45,0	1/1:3,20:23:53.99:469,54,0	1/1:0,11:11:26.99:234,27,0	1/1:1,20:21:56.99:495,57,0	1/1:1,13:13:38.99:339,39,0	1/1:3,29:32:70.45:667,70,0	1/1:0,14:14:38.99:338,39,0	1/1:3,16:19:44.99:390,45,0	1/1:1,28:29:77.97:677,78,0	1/1:2,20:22:53.98:469,54,0	1/1:0,6:6:15:130,15,0	1/1:3,17:20:47.98:417,48,0	1/1:1,9:10:23.99:208,24,0	1/1:1,24:25:71.99:625,72,0	1/1:4,19:23:56.98:495,57,0	1/1:2,25:27:68.98:599,69,0	1/1:1,17:18:50.98:443,51,0
chr10	15530207	.	GA	G	422.13	PASS	AB=0.969;AC=7;AF=0.125;AN=56;BaseQRankSum=1.925;DP=472;FS=3.538;HRun=12;HaplotypeScore=47.4149;InbreedingCoeff=0.8264;MQ=53.72;MQ0=21;MQRankSum=0.698;QD=5.34;ReadPosRankSum=-0.263;VQSLOD=1.0925;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,1:30:47.06:0,47,620	0/0:5,0:5:15:0,15,148	0/0:38,1:9:17.16:0,17,113	0/1:29,1:6:5.03:5,0,6	1/1:17,10:26:20.45:335,20,0	1/1:10,2:13:24.97:175,25,0	1/1:7,0:5:5.96:44,6,0	0/0:24,0:24:50.37:0,50,500	0/0:10,0:10:19.75:0,20,176	0/0:15,0:14:33.07:0,33,344	0/0:22,0:19:42.08:0,42,427	0/0:10,0:10:15:0,15,148	0/0:9,0:9:21.05:0,21,221	0/0:9,0:9:20.84:0,21,201	0/0:16,0:16:37.28:0,37,358	0/0:11,0:11:32.91:0,33,329	0/0:29,0:28:59.05:0,59,545	0/0:13,0:13:33:0,33,336	0/0:14,0:14:36.68:0,37,347	0/0:20,0:17:38.55:0,39,403	0/0:6,0:6:12.03:0,12,124	0/0:9,0:10:26.87:0,27,249	0/0:10,0:10:20.81:0,21,187	0/0:13,0:13:24.06:0,24,255	0/0:19,0:18:42.19:0,42,356	0/0:17,1:16:22.23:0,22,383	0/0:27,0:24:54.57:0,55,488	0/0:8,0:8:15.03:0,15,155
chr10	15531299	.	T	TAATAAATAAATA	6563.78	PASS	AB=0.873;AC=33;AF=0.971;AN=34;BaseQRankSum=-3.332;DP=231;FS=12.138;HRun=0;HaplotypeScore=48.9740;InbreedingCoeff=-0.1682;MQ=39.44;MQ0=17;MQRankSum=0.502;QD=34.37;ReadPosRankSum=-0.989;VQSLOD=1.7730;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:9,1:11:9.03:526,9,0	1/1:5,0:5:3.01:175,3,0	./.	./.	1/1:4,0:4:3.01:155,3,0	1/1:8,0:7:6.02:240,6,0	1/1:3,0:1:3.01:63,3,0	0/1:41,0:36:99:1409,0,219	./.	1/1:12,0:11:3.01:69,3,0	./.	./.	./.	1/1:4,3:10:9.03:526,9,0	1/1:3,1:4:3.01:175,3,0	1/1:4,2:6:6.02:351,6,0	1/1:13,2:15:9.03:401,9,0	1/1:15,2:15:1.37:689,1,0	1/1:7,0:6:3.01:61,3,0	./.	./.	1/1:1,1:2:3.01:175,3,0	./.	./.	1/1:2,1:6:3.01:175,3,0	./.	1/1:7,4:12:12.04:702,12,0	1/1:9,2:10:18.02:671,18,0
chr10	15531572	.	AAAAAAAAG	A	808.34	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=4.431;DP=537;FS=7.548;HRun=0;HaplotypeScore=117.8878;InbreedingCoeff=0.8020;MQ=58.92;MQ0=16;MQRankSum=-4.842;QD=26.08;ReadPosRankSum=-1.644;VQSLOD=2.3875;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:35:93.32:0,93,3654	0/0:6,0:6:15.05:0,15,504	0/0:77,0:11:22.79:0,23,366	0/0:67,0:21:42.85:0,43,640	0/0:17,0:16:4.82:0,5,180	0/0:13,0:11:26.70:0,27,207	0/0:15,0:15:23.85:0,24,187	0/0:28,0:28:67.09:0,67,2278	0/0:12,0:12:30.10:0,30,1135	0/0:13,0:13:33.11:0,33,1267	0/0:11,0:10:27.09:0,27,976	0/0:12,0:11:24.08:0,24,900	0/0:7,0:7:15.05:0,15,481	0/0:11,0:11:30.10:0,30,1145	0/0:18,0:18:45.15:0,45,1575	0/0:13,0:13:36.07:0,36,1161	0/0:31,0:30:75.26:0,75,2757	0/0:18,0:17:48.15:0,48,1811	1/1:11,11:20:32.80:772,33,0	1/1:4,5:7:6.02:147,6,0	0/0:4,0:4:0.47:0,0,1	0/0:5,0:5:15.05:0,15,599	0/0:14,0:14:33.11:0,33,1227	0/0:17,0:16:36.12:0,36,1389	0/0:13,0:13:36.12:0,36,1280	0/0:23,0:23:54.19:0,54,2057	0/0:16,0:16:45.15:0,45,1785	0/0:6,0:6:15.05:0,15,564
chr10	15531577	.	AAAG	A	1171.04	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=8.373;DP=545;FS=9.272;HRun=0;HaplotypeScore=80.3925;InbreedingCoeff=0.7436;MQ=60.57;MQ0=14;MQRankSum=-6.375;QD=16.49;ReadPosRankSum=-0.654;VQSLOD=2.0886;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:36:81.74:0,82,1720	0/0:6,0:6:8.02:0,8,220	0/0:71,0:14:25.37:0,25,242	0/0:71,0:23:13.89:0,14,258	1/1:4,14:17:19.61:302,20,0	1/1:1,10:11:27.04:368,27,0	1/1:3,10:13:24:339,24,0	0/0:30,0:30:46.53:0,47,1139	0/0:11,0:11:32.59:0,33,543	0/0:14,0:14:42.07:0,42,683	0/0:10,0:9:23.77:0,24,410	0/0:11,0:10:24.04:0,24,425	0/0:7,0:7:17.91:0,18,242	0/0:11,0:11:32.99:0,33,520	0/0:20,0:20:34.44:0,34,820	0/0:13,0:13:31.76:0,32,564	0/0:37,0:36:95.82:0,96,1421	0/0:21,0:20:59.71:0,60,947	1/1:20,0:19:3.39:281,3,0	0/1:9,0:7:32.63:36,0,33	0/0:3,0:3:1.11:0,1,15	0/0:5,0:5:15.05:0,15,289	0/0:14,0:14:33.04:0,33,610	0/0:19,0:19:42.05:0,42,686	0/0:14,0:14:37.25:0,37,595	0/0:25,0:25:66.01:0,66,1108	0/0:16,0:16:48.14:0,48,887	0/0:7,0:7:21.03:0,21,334
chr10	15531928	.	G	GA	1169.58	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=0.287;DP=494;FS=0.552;HRun=10;HaplotypeScore=56.2517;InbreedingCoeff=0.9046;MQ=62.82;MQ0=0;MQRankSum=-0.898;QD=20.52;ReadPosRankSum=-1.670;VQSLOD=3.9320;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,2:34:28.88:0,29,645	0/0:6,0:6:17.98:0,18,148	0/0:6,0:6:3.94:0,4,54	0/0:9,0:8:22.98:0,23,173	0/0:32,0:33:65.98:0,66,565	0/0:18,0:18:44.93:0,45,369	0/0:11,0:11:29.94:0,30,243	0/0:40,0:42:67.61:0,68,676	0/0:16,1:17:9.95:0,10,288	0/0:28,0:28:65.91:0,66,540	0/0:19,0:19:47.39:0,47,393	0/0:14,0:14:35.94:0,36,295	0/0:11,0:11:23.96:0,24,197	0/0:11,0:11:29.96:0,30,246	0/0:13,0:13:26.94:0,27,221	0/0:11,0:11:29.96:0,30,246	0/0:26,0:26:65.87:0,66,536	0/0:19,0:19:47.94:0,48,394	1/1:3,22:25:63.13:656,63,0	1/1:6,13:19:12.57:316,13,0	1/1:2,11:13:33:337,33,0	0/0:5,0:5:14.98:0,15,123	0/0:18,0:18:41.89:0,42,335	0/0:6,0:6:14.67:0,15,123	0/0:21,0:21:47.92:0,48,394	0/0:20,0:20:47.91:0,48,394	0/0:31,0:31:77.87:0,78,640	0/0:7,0:7:17.97:0,18,148
chr10	15532729	.	TC	T	2912.68	PASS	AB=0.956;AC=16;AF=0.286;AN=56;BaseQRankSum=5.309;DP=556;FS=21.996;HRun=1;HaplotypeScore=67.5188;InbreedingCoeff=0.6252;MQ=57.75;MQ0=10;MQRankSum=-1.787;QD=16.09;ReadPosRankSum=-3.005;VQSLOD=1.8096;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:44.24:0,44,334	0/0:10,0:10:26.89:0,27,285	0/0:29,0:8:14.64:0,15,128	0/0:21,0:6:3.56:0,4,33	1/1:21,7:28:63.44:599,63,0	1/1:8,4:12:32.94:323,33,0	1/1:1,13:14:24.03:290,24,0	0/0:31,0:31:64.94:0,65,606	0/0:17,0:17:26.20:0,26,496	0/0:37,0:37:99:0,104,984	0/0:17,0:17:27.22:0,27,359	0/1:11,1:12:11.56:12,0,59	0/0:16,0:16:20.93:0,21,182	0/0:11,0:11:19.12:0,19,121	0/0:17,0:17:35.89:0,36,343	0/0:9,0:9:16.20:0,16,168	0/1:18,1:19:20.06:20,0,278	0/1:19,1:19:31.34:31,0,234	1/1:2,21:23:65.87:705,66,0	1/1:8,16:24:71.26:791,71,0	1/1:1,12:13:26.87:324,27,0	0/0:12,0:12:10.09:0,10,83	0/1:16,0:15:10.76:11,0,150	0/0:25,1:26:38.19:0,38,243	0/0:18,0:18:24.80:0,25,192	0/0:22,0:22:53.54:0,54,511	0/0:31,0:31:41.70:0,42,671	0/0:15,0:15:36.89:0,37,303
chr10	15532730	.	C	CT	1484.96	PASS	AB=0.873;AC=27;AF=0.482;AN=56;BaseQRankSum=-3.476;DP=568;FS=7.740;HRun=14;HaplotypeScore=76.3442;InbreedingCoeff=0.1260;MQ=57.77;MQ0=10;MQRankSum=1.177;QD=3.68;ReadPosRankSum=-2.244;VQSLOD=0.1923;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:10,25:37:43.11:144,0,43	0/0:9,1:10:20.62:0,21,134	0/0:29,0:8:3.13:0,3,39	0/1:20,0:6:0.60:4,0,1	0/1:27,0:27:21.77:22,0,43	0/1:12,0:12:9.27:9,0,20	0/0:14,0:14:10.77:0,11,28	0/0:31,0:31:9.82:0,10,131	0/0:16,0:16:23.86:0,24,184	0/1:35,2:37:73.29:73,0,276	0/0:14,0:17:31.20:0,31,174	1/1:2,10:13:14.80:119,15,0	0/1:6,10:16:17.76:18,0,22	0/1:4,8:12:3.66:59,0,4	0/1:9,7:17:53.88:103,0,54	1/1:6,3:9:11.78:104,12,0	0/1:19,0:21:11.22:11,0,117	1/1:15,5:19:14.06:216,14,0	0/1:24,0:24:14.44:14,0,17	0/0:25,0:25:8.70:0,9,59	0/1:13,0:13:5.39:5,0,22	1/1:0,12:12:14.91:117,15,0	1/1:10,6:15:10.88:180,11,0	1/1:2,24:27:19.63:285,20,0	1/1:5,14:19:6.42:131,6,0	0/0:23,0:23:37.62:0,38,222	0/1:31,2:33:0.12:0,0,218	0/1:14,1:17:48.51:49,0,56
chr10	15533083	.	T	TG	4279.19	PASS	AB=0.656;AC=35;AF=0.625;AN=56;BaseQRankSum=-10.622;DP=410;FS=17.854;HRun=9;HaplotypeScore=55.6426;InbreedingCoeff=0.4399;MQ=66.23;MQ0=3;MQRankSum=1.579;QD=14.08;ReadPosRankSum=0.826;VQSLOD=3.0666;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:9,16:25:10.52:308,11,0	1/1:5,3:8:18.04:189,18,0	0/1:12,0:9:3.46:14,0,3	0/0:12,0:5:5.48:0,5,35	0/0:14,0:20:34.47:0,34,116	0/0:13,0:17:34.93:0,35,117	0/0:9,0:12:11.64:0,12,40	1/1:9,8:17:20.49:165,20,0	1/1:3,6:9:11.82:113,12,0	0/1:7,10:17:10.06:234,0,10	1/1:5,13:18:26.51:271,27,0	1/1:1,12:13:15.20:237,15,0	1/1:1,6:7:12.03:133,12,0	0/1:5,6:11:7.53:114,0,8	1/1:9,9:19:26.11:348,26,0	0/1:1,10:11:4.93:178,0,5	1/1:3,26:29:28.07:513,28,0	0/1:6,9:15:30.93:145,0,31	0/0:9,0:13:19.74:0,20,74	0/0:15,0:17:31.45:0,31,115	0/0:13,0:14:26.45:0,26,89	1/1:1,12:13:3.84:216,4,0	0/1:6,10:16:19.48:205,0,19	1/1:4,10:14:15.04:166,15,0	1/1:2,8:10:12.03:133,12,0	1/1:9,15:24:43.27:410,43,0	0/1:2,9:11:31.24:122,0,31	1/1:1,3:3:6.02:66,6,0
chr10	15533095	.	C	CT	1439.15	PASS	AB=0.944;AC=13;AF=0.241;AN=54;BaseQRankSum=1.354;DP=376;FS=3.657;HRun=8;HaplotypeScore=60.4483;InbreedingCoeff=0.7962;MQ=55.85;MQ0=3;MQRankSum=-0.748;QD=14.11;ReadPosRankSum=3.031;VQSLOD=3.5488;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:32.04:0,32,276	0/0:7,0:7:18.01:0,18,162	0/0:10,0:4:2.98:0,3,27	0/1:16,1:3:13.78:14,0,21	1/1:13,7:20:30.04:322,30,0	1/1:16,1:17:33.04:331,33,0	1/1:4,4:8:9.02:103,9,0	0/0:11,0:10:23.96:0,24,209	0/0:6,0:6:9:0,9,82	0/0:11,0:11:26.99:0,27,240	0/0:13,0:12:17.36:0,17,143	0/0:13,0:13:2.50:0,3,108	0/0:8,0:8:12.34:0,12,98	0/0:8,0:8:13.58:0,14,93	0/0:15,0:15:23.61:0,24,214	0/0:11,0:11:18.01:0,18,163	0/0:30,0:30:53.76:0,54,452	0/0:13,0:13:23.94:0,24,201	1/1:9,2:11:17.89:187,18,0	1/1:16,1:16:32.81:328,33,0	1/1:10,2:12:30.08:336,30,0	0/0:17,0:17:35.95:0,36,313	0/0:18,0:18:32.98:0,33,301	0/0:15,0:15:18:0,18,162	0/0:11,0:11:14.96:0,15,129	0/0:17,0:17:38.85:0,39,333	0/0:15,0:15:29.50:0,30,245	./.
chr10	15533250	.	T	TCACACACACACACACA	12192.11	PASS	AC=48;AF=0.923;AN=52;BaseQRankSum=-0.378;DP=468;FS=0.000;HRun=0;HaplotypeScore=204.4863;InbreedingCoeff=0.3838;MQ=62.48;MQ0=9;MQRankSum=-2.007;QD=30.40;ReadPosRankSum=1.924;VQSLOD=3.8783;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:25:12.17:505,12,0	./.	0/0:30,0:20:2.30:0,2,107	0/0:25,0:16:4.52:0,5,257	1/1:14,0:14:12.51:600,13,0	1/1:21,0:21:12:421,12,0	1/1:23,0:22:11.98:174,12,0	1/1:15,0:15:21.07:879,21,0	1/1:14,1:15:9.03:486,9,0	1/1:18,0:18:27.04:796,27,0	1/1:15,0:15:2.99:167,3,0	1/1:11,0:14:15.05:726,15,0	1/1:22,0:21:33.11:1862,33,0	1/1:14,0:14:12.51:681,13,0	1/1:11,0:11:2.74:29,3,0	1/1:14,3:17:9.03:536,9,0	1/1:23,0:23:20.35:727,20,0	1/1:9,0:9:8.99:343,9,0	1/1:18,0:16:18.03:670,18,0	1/1:13,0:13:9.01:456,9,0	1/1:26,0:25:8.22:241,8,0	./.	1/1:15,0:15:5.45:224,5,0	1/1:23,3:28:2.03:225,2,0	1/1:8,0:10:6.49:415,6,0	1/1:12,0:12:21.02:452,21,0	1/1:10,0:8:6.46:51,6,0	1/1:5,0:7:12:526,12,0
chr10	15533284	.	C	CT	405.33	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=3.905;DP=427;FS=15.184;HRun=9;HaplotypeScore=78.6241;InbreedingCoeff=0.7043;MQ=64.74;MQ0=8;MQRankSum=-1.689;QD=6.87;ReadPosRankSum=-3.601;VQSLOD=-0.3461;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:21:30.34:0,30,273	0/0:4,0:4:11.99:0,12,101	0/0:36,0:23:34.61:0,35,297	0/0:21,0:14:18.76:0,19,144	1/1:3,12:17:7.57:209,8,0	1/1:2,10:12:12.50:133,13,0	1/1:7,15:22:20.14:190,20,0	0/0:22,0:22:50.91:0,51,433	0/0:10,0:10:23.80:0,24,184	0/0:14,0:14:35.99:0,36,312	0/0:16,0:16:20.44:0,20,178	0/0:11,0:11:26.67:0,27,202	0/0:17,0:16:26.85:0,27,226	0/0:12,0:12:23.97:0,24,207	0/0:7,1:8:1.20:0,1,136	0/0:13,0:12:23.18:0,23,194	0/0:24,0:23:47.51:0,48,405	0/0:9,0:9:23.99:0,24,206	0/0:26,0:24:62.92:0,63,533	0/0:10,0:9:11.22:0,11,95	0/0:28,0:28:37.39:0,37,298	0/0:9,0:8:17.99:0,18,156	0/1:8,0:7:9.35:9,0,20	0/0:15,0:14:17.74:0,18,149	0/0:5,0:6:6.71:0,7,39	0/0:12,0:12:26.95:0,27,227	0/0:10,0:10:20.97:0,21,178	0/0:13,0:13:29.06:0,29,246
chr10	15536714	.	GAGCCATCTCTCC	G	702.62	PASS	AC=8;AF=0.160;AN=50;BaseQRankSum=2.311;DP=338;FS=5.868;HRun=0;HaplotypeScore=73.5711;InbreedingCoeff=0.6061;MQ=60.71;MQ0=86;MQRankSum=-4.382;QD=26.02;ReadPosRankSum=-0.395;VQSLOD=1.2099;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:22:45.15:0,45,2318	./.	0/0:62,0:12:24.91:0,25,580	0/0:67,0:13:33.09:0,33,903	1/1:5,1:4:5.99:183,6,0	1/1:4,4:7:12.04:427,12,0	1/1:6,2:5:3.01:112,3,0	0/0:20,0:6:18.04:0,18,610	0/0:3,0:3:6.02:0,6,275	0/0:7,0:7:15.05:0,15,639	0/0:7,0:7:11.17:0,11,449	0/0:6,0:5:8.63:0,9,380	0/0:3,0:2:3.01:0,3,120	0/0:3,0:3:3.01:0,3,46	0/0:11,0:11:18.06:0,18,949	0/0:6,0:5:15.05:0,15,831	0/0:14,0:14:36.12:0,36,1817	0/0:16,0:16:33.07:0,33,1222	1/1:4,1:2:3.01:107,3,0	./.	./.	0/0:4,0:4:6.02:0,6,356	0/0:7,0:6:9.03:0,9,487	0/0:9,0:9:6.49:0,6,240	0/0:9,0:9:18.06:0,18,833	0/0:3,0:3:9.03:0,9,434	0/0:9,0:9:18.06:0,18,868	0/0:9,0:7:5.80:0,6,228
chr10	15536738	.	CCTTT	C	333.04	PASS	AB=0.985;AC=20;AF=0.370;AN=54;BaseQRankSum=0.581;DP=476;FS=0.838;HRun=0;HaplotypeScore=48.1316;InbreedingCoeff=0.0585;MQ=50.51;MQ0=79;MQRankSum=2.330;QD=1.61;ReadPosRankSum=0.633;VQSLOD=1.0372;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:21,0:18:8.69:72,0,9	1/1:4,0:3:2.29:25,2,0	0/0:81,0:13:17.43:0,17,212	0/0:75,0:18:29.25:0,29,216	0/0:14,0:12:16.63:0,17,242	0/0:12,0:10:27.08:0,27,320	0/0:6,0:6:1.11:0,1,37	0/0:13,0:10:5.95:0,6,51	0/1:15,0:7:10.80:17,0,11	0/1:12,0:6:17.14:17,0,42	0/1:13,0:9:17.06:17,0,31	1/1:15,0:12:7.84:51,8,0	./.	0/0:8,0:6:0:0,0,0	1/1:19,0:15:9.13:62,9,0	0/1:8,0:5:9.04:9,0,81	0/1:17,0:13:28.55:29,0,116	1/1:14,0:11:10.72:86,11,0	0/1:14,0:6:1.08:1,0,82	0/1:8,0:5:9.18:9,0,10	0/0:2,0:2:0:0,0,0	0/0:8,0:6:5.82:0,6,33	0/0:10,0:6:12.80:0,13,72	1/1:6,8:11:0.84:45,1,0	0/1:16,0:10:16.22:16,0,63	0/1:14,3:12:26.89:27,0,143	0/0:12,0:11:6.93:0,7,165	0/0:18,0:8:3.48:0,3,43
chr10	15537216	.	C	CT	1687.61	PASS	AB=0.829;AC=27;AF=0.482;AN=56;BaseQRankSum=0.487;DP=661;FS=0.897;HRun=16;HaplotypeScore=88.2886;InbreedingCoeff=-0.3709;MQ=64.68;MQ0=13;MQRankSum=0.175;QD=3.47;ReadPosRankSum=-1.243;VQSLOD=0.3000;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:24,7:33:25.41:212,0,25	0/1:7,1:10:14.51:15,0,29	0/1:49,0:14:12.42:12,0,20	0/0:48,0:10:6.20:0,6,38	0/1:16,16:33:26.87:143,0,27	0/1:16,3:20:19.27:175,0,19	0/1:8,14:23:16.36:157,0,16	0/1:35,1:37:27.62:28,0,107	0/1:18,0:17:6.81:7,0,63	0/0:25,0:27:29.64:0,30,161	0/0:33,0:36:4.46:0,4,215	1/1:9,2:11:9.84:103,10,0	0/1:16,0:17:27.66:73,0,28	1/1:8,5:13:15.23:190,15,0	0/1:16,2:25:32.51:35,0,33	0/1:6,9:15:22.19:96,0,22	0/1:15,2:23:13.57:14,0,95	0/1:5,8:13:7.46:29,0,7	0/1:21,0:25:5.60:81,0,6	1/1:20,0:22:3.09:65,3,0	0/1:8,0:8:14.62:35,0,15	0/1:15,6:21:12.94:153,0,13	0/1:11,7:19:23.45:23,0,35	1/1:3,6:9:1.05:93,1,0	0/1:11,15:28:14.28:107,0,14	0/0:23,0:26:33.59:0,34,164	0/0:33,0:37:37.88:0,38,283	0/1:10,0:10:2.45:2,0,73
chr10	15537231	.	T	TA	766.42	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=5.486;DP=624;FS=10.495;HRun=0;HaplotypeScore=92.8132;InbreedingCoeff=0.9003;MQ=72.99;MQ0=9;MQRankSum=-1.226;QD=14.19;ReadPosRankSum=0.849;VQSLOD=4.7026;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:66.23:0,66,491	0/0:12,0:12:31.01:0,31,250	0/0:47,0:17:2.84:0,3,180	0/0:46,0:17:25.23:0,25,205	0/0:28,0:28:52.18:0,52,398	0/0:21,0:21:45.07:0,45,345	0/0:20,0:20:15.69:0,16,173	0/0:33,0:33:75.16:0,75,718	0/0:16,0:15:20.51:0,21,245	0/0:24,0:24:66.04:0,66,717	0/0:34,0:34:89.68:0,90,937	0/0:8,0:8:11.72:0,12,90	0/0:19,0:19:47.90:0,48,391	0/0:14,0:14:18.31:0,18,120	0/0:18,0:18:30.82:0,31,281	0/0:15,0:15:20.28:0,20,171	0/0:21,0:21:50.07:0,50,483	0/0:13,0:12:13.27:0,13,97	1/1:10,7:17:48.75:406,49,0	1/1:9,15:24:19.48:333,19,0	1/1:2,11:13:17.55:167,18,0	0/0:18,0:18:34.13:0,34,253	0/0:19,0:19:34.03:0,34,308	0/0:11,0:10:15.42:0,15,115	0/0:25,0:25:25.18:0,25,203	0/0:22,0:22:58.14:0,58,589	0/0:39,0:39:99:0,104,1076	0/0:16,0:15:41.82:0,42,404
chr10	15539301	.	GA	G	3849.54	PASS	AB=0.576;AC=21;AF=0.375;AN=56;BaseQRankSum=9.860;DP=557;FS=6.728;HRun=8;HaplotypeScore=59.2849;InbreedingCoeff=0.9134;MQ=80.67;MQ0=1;MQRankSum=-0.713;QD=21.04;ReadPosRankSum=3.371;VQSLOD=3.8359;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,28:31:69.03:666,69,0	0/0:3,0:3:9.03:0,9,108	0/0:31,0:27:34.67:0,35,522	0/0:17,1:14:11.69:0,12,122	0/0:26,0:26:72.14:0,72,850	0/0:21,0:21:54.16:0,54,641	0/0:22,0:21:57.17:0,57,688	0/0:20,0:20:48.12:0,48,558	0/0:18,0:18:48.05:0,48,538	0/0:20,0:20:51.12:0,51,599	0/0:25,1:26:46.26:0,46,831	1/1:2,11:13:27.04:261,27,0	1/1:0,5:5:15.02:145,15,0	1/1:1,18:19:42.07:405,42,0	1/1:0,22:22:60.10:579,60,0	0/1:5,14:19:6.19:231,0,6	0/0:32,0:33:90.13:0,90,1053	1/1:3,5:8:9:87,9,0	0/0:22,0:22:57.09:0,57,654	0/0:27,0:27:75.22:0,75,894	0/0:17,0:17:36.09:0,36,422	1/1:2,20:22:51.07:491,51,0	1/1:2,13:15:36.06:348,36,0	1/1:3,9:12:21.03:203,21,0	1/1:0,17:17:45.07:435,45,0	0/0:24,0:24:72.21:0,72,852	0/0:37,0:37:99:0,102,1175	0/0:8,0:8:21.06:0,21,254
chr10	15539405	.	C	CA	743.61	PASS	AB=0.883;AC=15;AF=0.268;AN=56;BaseQRankSum=9.351;DP=437;FS=1.065;HRun=12;HaplotypeScore=73.4298;InbreedingCoeff=0.6274;MQ=51.50;MQ0=7;MQRankSum=-10.353;QD=5.59;ReadPosRankSum=1.057;VQSLOD=2.0230;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,1:23:18.57:0,19,273	0/0:17,0:17:38.75:0,39,283	0/0:6,0:1:2.98:0,3,22	0/0:4,0:2:3.84:0,4,22	1/1:21,0:20:25.62:162,26,0	1/1:16,0:15:42.72:224,43,0	1/1:24,0:23:31.82:184,32,0	0/0:29,1:31:38.31:0,38,425	0/0:13,0:11:8.70:0,9,176	0/1:14,3:16:19.67:20,0,198	0/0:20,0:19:44.71:0,45,327	0/0:8,0:8:14.91:0,15,109	0/1:7,1:9:12.04:12,0,76	0/0:14,0:14:35.18:0,35,248	0/0:13,0:13:19.89:0,20,137	0/0:16,0:16:35.79:0,36,262	0/0:26,1:25:44.53:0,45,327	0/1:8,0:9:7.29:7,0,70	1/1:15,0:14:26.85:146,27,0	1/1:14,0:14:23.76:140,24,0	1/1:8,0:6:5.81:33,6,0	0/0:11,0:11:14.87:0,15,109	0/0:13,0:14:29.55:0,30,209	0/0:17,0:15:28.85:0,29,203	0/0:12,0:12:32.74:0,33,237	0/0:16,1:17:9.57:0,10,233	0/0:19,0:18:41.65:0,42,297	0/0:17,1:17:3.60:0,4,190
chr10	15539414	.	A	AT	1752.61	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=13.126;DP=430;FS=6.086;HRun=0;HaplotypeScore=73.8909;InbreedingCoeff=0.8972;MQ=55.29;MQ0=4;MQRankSum=-9.041;QD=17.70;ReadPosRankSum=0.908;VQSLOD=5.9245;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:27:61.68:0,62,726	0/0:14,0:14:39.13:0,39,539	0/0:6,0:1:3.01:0,3,42	0/0:7,0:4:6.47:0,6,63	1/1:6,18:23:22.96:329,23,0	1/1:3,12:16:43.02:408,43,0	1/1:9,13:21:43.77:396,44,0	0/0:31,0:31:88.89:0,89,1113	0/0:15,0:14:38.13:0,38,460	0/0:21,0:20:51.04:0,51,617	0/0:21,0:20:57.12:0,57,724	0/0:5,0:5:15.05:0,15,209	0/0:8,0:8:6.60:0,7,175	0/0:14,0:14:42.12:0,42,540	0/0:12,0:11:29.99:0,30,344	0/0:14,0:14:36.12:0,36,499	0/0:25,0:25:59.92:0,60,728	0/0:5,0:5:11.99:0,12,166	1/1:9,9:18:47.05:406,47,0	1/1:2,9:11:31.72:304,32,0	1/1:5,2:6:6:90,6,0	0/0:8,0:8:21.02:0,21,256	0/0:14,0:14:38.46:0,38,463	0/0:16,0:16:41.99:0,42,487	0/0:14,0:14:42.12:0,42,535	0/0:17,0:17:47.38:0,47,603	0/0:18,0:17:45.13:0,45,598	0/0:17,0:16:34.76:0,35,450
chr10	15539418	.	T	TAAA	4869.23	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=12.989;DP=428;FS=4.057;HRun=12;HaplotypeScore=77.9563;InbreedingCoeff=0.9177;MQ=61.45;MQ0=3;MQRankSum=-10.832;QD=43.87;ReadPosRankSum=-0.678;VQSLOD=5.3379;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:27:63.37:0,63,1107	0/0:14,0:14:39.13:0,39,724	0/0:7,0:2:6:0,6,79	0/1:10,0:7:0.18:0,0,87	1/1:8,18:25:60.18:1057,60,0	1/1:2,14:16:48.16:1010,48,0	1/1:7,15:21:58.02:1041,58,0	0/0:33,0:33:90.29:0,90,1529	0/0:15,0:15:42.14:0,42,710	0/0:19,0:18:51.15:0,51,900	0/0:20,0:20:57.18:0,57,1008	0/0:5,0:5:15.05:0,15,272	0/0:7,0:7:18.06:0,18,308	0/0:14,0:14:42.14:0,42,764	0/0:12,0:12:30.09:0,30,513	0/0:13,0:13:39.13:0,39,712	0/0:23,0:23:57.16:0,57,966	0/0:6,0:6:18.03:0,18,272	1/1:9,10:20:50.94:894,51,0	1/1:2,9:11:29.45:629,29,0	1/1:3,3:5:15.05:238,15,0	0/0:9,0:9:23.90:0,24,371	0/0:12,0:12:33.58:0,34,594	0/0:15,0:15:42.13:0,42,716	0/0:16,0:16:41.10:0,41,687	0/0:16,0:16:48.01:0,48,784	0/0:21,0:20:51.10:0,51,799	0/0:12,0:12:36.12:0,36,641
chr10	15539808	.	CGG	C	84.53	PASS	AC=6;AF=0.158;AN=38;BaseQRankSum=2.245;DP=79;FS=0.000;HRun=2;HaplotypeScore=19.4210;InbreedingCoeff=0.3956;MQ=110.22;MQ0=2;MQRankSum=0.038;QD=12.08;ReadPosRankSum=-0.418;VQSLOD=0.3406;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	0/0:2,0:2:6.02:0,6,110	0/0:22,0:12:7.38:0,7,279	0/0:12,0:6:14.94:0,15,217	./.	1/1:0,1:1:3.01:49,3,0	./.	0/0:3,0:3:9.03:0,9,183	./.	0/0:2,0:2:6.02:0,6,122	0/0:2,0:2:6.02:0,6,122	0/0:3,0:3:6.02:0,6,122	0/0:3,0:3:6.02:0,6,112	0/0:1,0:1:2.97:0,3,20	0/0:4,0:4:8.97:0,9,106	0/0:1,0:1:3.01:0,3,60	./.	0/0:5,0:5:15.05:0,15,289	1/1:0,2:2:6.01:68,6,0	1/1:0,4:4:3.83:70,4,0	./.	0/0:1,0:1:3.01:0,3,61	0/0:2,0:2:6.02:0,6,121	./.	0/0:1,0:1:3.01:0,3,61	./.	./.	0/0:3,0:3:9.03:0,9,182
chr10	15539967	.	CCTGGGAACT	C	2573.02	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.397;DP=409;FS=1.717;HRun=0;HaplotypeScore=97.6413;InbreedingCoeff=0.9233;MQ=57.25;MQ0=10;MQRankSum=-7.566;QD=53.60;ReadPosRankSum=0.017;VQSLOD=3.4528;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,114,5347	0/0:2,0:2:6.02:0,6,290	0/0:33,0:10:30.09:0,30,1200	0/0:26,0:8:21.07:0,21,851	0/0:6,0:6:18.06:0,18,870	0/0:10,0:10:30.10:0,30,1450	0/0:19,0:19:48.15:0,48,2000	0/0:21,0:21:54.19:0,54,2507	0/0:6,0:6:15.04:0,15,550	0/0:10,0:10:30.10:0,30,1430	0/0:4,0:4:12.04:0,12,561	0/0:10,0:10:30.10:0,30,1426	0/0:8,0:8:24.08:0,24,1146	0/0:9,0:9:27.09:0,27,1174	0/0:15,0:15:45.15:0,45,2074	0/0:7,0:7:18.06:0,18,769	0/0:39,0:39:99:0,114,5221	0/0:25,0:24:66.23:0,66,2984	1/1:2,8:9:21.06:562,21,0	1/1:2,15:17:42.14:1250,42,0	1/1:6,15:21:30.10:903,30,0	0/0:9,0:9:27.09:0,27,1233	0/0:10,0:10:24.08:0,24,1159	0/0:22,0:22:63.22:0,63,2901	0/0:7,0:7:21.07:0,21,916	0/0:11,0:10:27.09:0,27,1242	0/0:7,0:7:18.06:0,18,870	0/0:4,0:4:12.04:0,12,554
chr10	15540093	.	CT	C	1970.27	PASS	AB=0.857;AC=13;AF=0.232;AN=56;BaseQRankSum=8.800;DP=513;FS=4.255;HRun=10;HaplotypeScore=54.4479;InbreedingCoeff=0.8158;MQ=62.35;MQ0=10;MQRankSum=-0.415;QD=14.59;ReadPosRankSum=0.646;VQSLOD=3.7438;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:87.68:0,88,947	0/0:1,0:1:3.01:0,3,33	0/0:20,0:11:4.80:0,5,27	0/0:19,1:9:8.12:0,8,48	1/1:2,14:15:32.99:286,33,0	1/1:1,13:14:32.98:286,33,0	1/1:7,19:22:56.98:494,57,0	0/0:30,0:29:66.11:0,66,703	0/0:17,0:17:36.06:0,36,385	0/0:18,0:17:39.06:0,39,412	0/0:8,0:7:20.94:0,21,194	0/0:20,0:20:54.10:0,54,573	0/0:9,0:9:23.89:0,24,239	0/0:18,1:19:13:0,13,339	0/0:15,0:15:36.10:0,36,398	0/0:15,0:14:30.08:0,30,332	0/0:32,0:31:72.17:0,72,785	0/0:15,0:15:36.10:0,36,398	1/1:12,12:22:35.98:312,36,0	1/1:3,17:21:47.01:396,47,0	1/1:2,20:21:41.97:365,42,0	0/1:10,2:12:18.99:19,0,266	0/0:8,0:7:8.28:0,8,187	0/0:23,1:24:37.09:0,37,624	0/0:11,0:11:27.07:0,27,299	0/0:23,0:23:45.08:0,45,478	0/0:23,0:25:57.07:0,57,608	0/0:8,0:7:15.04:0,15,165
chr10	15541627	.	G	GT	4462.86	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=6.123;DP=559;FS=6.751;HRun=6;HaplotypeScore=68.5794;InbreedingCoeff=0.9910;MQ=69.41;MQ0=1;MQRankSum=-10.493;QD=30.57;ReadPosRankSum=-3.311;VQSLOD=4.0673;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:60.07:0,60,586	0/0:11,0:11:30.06:0,30,301	0/0:25,0:17:30.07:0,30,359	0/0:19,0:13:17.84:0,18,160	1/1:14,20:34:84.21:991,84,0	1/1:7,17:24:69.14:835,69,0	1/1:2,14:16:39.12:490,39,0	0/0:27,0:27:63.13:0,63,638	0/0:18,0:18:51.12:0,51,520	0/0:34,0:34:90.20:0,90,914	0/0:28,0:28:84.18:0,84,849	0/0:17,0:17:45.08:0,45,451	0/0:16,0:16:45.08:0,45,450	0/0:10,0:10:30.07:0,30,306	0/0:19,0:19:57.13:0,57,581	0/0:25,0:25:69.14:0,69,696	0/0:14,0:14:33.04:0,33,360	0/0:20,0:20:57.08:0,57,564	1/1:7,20:26:72.22:884,72,0	1/1:10,24:33:81.24:992,81,0	1/1:4,7:11:23.86:270,24,0	0/0:9,0:9:27.06:0,27,274	0/0:15,0:15:42.09:0,42,428	0/0:4,0:4:12.03:0,12,122	0/0:21,0:21:60.11:0,60,603	0/0:26,0:26:63.14:0,63,643	0/0:16,0:16:48.09:0,48,481	0/0:16,0:16:45.04:0,45,432
chr10	15541645	.	GT	G	2613.96	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=13.402;DP=544;FS=3.662;HRun=8;HaplotypeScore=69.5225;InbreedingCoeff=0.9098;MQ=60.99;MQ0=2;MQRankSum=-9.093;QD=18.15;ReadPosRankSum=-0.002;VQSLOD=3.5605;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:63.18:0,63,746	0/0:11,0:11:24.07:0,24,289	0/0:26,1:15:32.55:0,33,319	0/1:17,0:9:2.58:3,0,132	1/1:4,26:30:66.10:637,66,0	1/1:2,19:21:57.09:550,57,0	1/1:5,7:12:7.12:205,7,0	0/0:30,0:30:72.21:0,72,857	0/0:17,0:17:51.12:0,51,580	0/0:36,0:36:99:0,99,1155	0/0:27,0:27:72.20:0,72,848	0/0:17,0:17:45.10:0,45,518	0/0:11,0:11:33.10:0,33,399	0/0:12,0:12:33.10:0,33,399	0/0:16,0:16:39.12:0,39,471	0/0:24,0:24:66.20:0,66,797	0/0:18,0:18:40.12:0,40,506	0/0:25,0:25:75.23:0,75,906	1/1:8,15:22:41.98:389,42,0	1/1:1,32:32:90.14:868,90,0	1/1:2,6:8:15.01:145,15,0	0/0:7,0:8:17.92:0,18,196	0/0:15,0:15:45.14:0,45,543	0/0:6,0:6:18.06:0,18,217	0/0:20,0:20:57.16:0,57,678	0/0:22,0:22:54.15:0,54,632	0/0:21,0:21:63.17:0,63,746	0/0:16,0:15:45.11:0,45,519
chr10	15542519	.	TTC	T	942.99	PASS	AB=1.000;AC=10;AF=0.179;AN=56;BaseQRankSum=4.116;DP=488;FS=5.539;HRun=0;HaplotypeScore=68.6707;InbreedingCoeff=0.7968;MQ=67.46;MQ0=5;MQRankSum=-5.297;QD=10.72;ReadPosRankSum=-3.021;VQSLOD=2.3642;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:56.54:0,57,730	0/0:6,0:6:13.57:0,14,155	0/0:32,0:13:23.18:0,23,212	0/0:25,0:14:19.24:0,19,198	0/1:13,0:13:8.54:58,0,9	1/1:14,0:14:11.20:100,11,0	0/1:11,0:11:0.55:1,0,17	0/0:41,0:41:99:0,103,1165	0/0:12,0:12:28.16:0,28,267	0/0:13,0:13:35.33:0,35,336	0/0:16,0:16:48.02:0,48,577	0/0:6,0:6:11.98:0,12,134	0/0:13,0:13:31.92:0,32,409	0/0:10,0:10:19.86:0,20,242	0/0:7,0:7:17.02:0,17,224	0/0:10,0:10:25.30:0,25,308	0/0:47,0:47:99:0,114,1343	0/0:17,0:17:40.48:0,40,483	1/1:21,2:23:50.01:398,50,0	1/1:13,3:16:27.42:273,27,0	1/1:8,3:11:26.92:274,27,0	0/0:9,0:9:26.66:0,27,259	0/0:12,0:12:26.10:0,26,277	0/0:20,0:19:37.77:0,38,435	0/0:15,0:15:38.91:0,39,447	0/0:25,0:24:65.54:0,66,852	0/0:21,0:21:48.75:0,49,527	0/0:16,0:16:42.01:0,42,607
chr10	15542520	.	TC	T	1019.29	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=5.616;DP=502;FS=10.589;HRun=1;HaplotypeScore=66.0746;InbreedingCoeff=0.8285;MQ=67.03;MQ0=5;MQRankSum=-6.545;QD=10.62;ReadPosRankSum=-3.461;VQSLOD=-0.3775;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:48.27:0,48,518	0/1:6,0:6:2.95:3,0,104	0/0:32,0:13:14.81:0,15,181	0/0:27,0:14:13.58:0,14,165	1/1:12,0:12:0.09:90,0,0	1/1:13,1:14:17.01:159,17,0	1/1:12,0:12:15.75:73,16,0	0/0:40,1:41:60.29:0,60,894	0/0:12,0:12:11.87:0,12,163	0/0:14,0:14:24.19:0,24,250	0/0:16,0:16:47.96:0,48,464	0/0:6,0:6:10.25:0,10,93	0/0:13,0:13:29.68:0,30,301	0/0:10,0:10:19.80:0,20,184	0/0:9,0:9:16.84:0,17,175	0/0:8,1:9:5.95:0,6,210	0/0:52,0:51:99:0,112,1060	0/0:18,0:18:43.34:0,43,393	1/1:16,7:23:41.73:385,42,0	1/1:15,2:17:33.75:255,34,0	1/1:10,2:12:28.95:230,29,0	0/0:10,0:10:24:0,24,185	0/0:12,0:12:25.49:0,25,227	0/0:19,0:18:31.48:0,31,313	0/0:14,1:15:34.91:0,35,319	0/0:26,0:25:65.04:0,65,652	0/0:21,0:21:34.30:0,34,367	0/0:16,0:16:41.04:0,41,449
chr10	15542628	.	T	TGC	87.06	PASS	AB=0.789;AC=7;AF=0.125;AN=56;BaseQRankSum=5.506;DP=442;FS=52.175;HRun=0;HaplotypeScore=76.3512;InbreedingCoeff=0.0532;MQ=55.14;MQ0=23;MQRankSum=-5.590;QD=1.34;ReadPosRankSum=1.175;VQSLOD=-0.4273;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:51.17:0,51,828	0/0:6,0:4:12.04:0,12,196	0/0:43,0:5:12.49:0,12,170	0/0:45,0:11:19.38:0,19,225	0/1:12,4:15:32.51:33,0,311	0/1:6,5:11:63.61:64,0,144	0/1:12,3:11:37.49:37,0,232	0/0:17,0:16:42.07:0,42,586	0/0:12,0:12:27.09:0,27,441	0/0:19,0:19:57.12:0,57,869	0/0:18,0:18:33.11:0,33,533	0/0:1,0:1:3.01:0,3,49	0/0:7,0:7:19.62:0,20,298	0/0:5,0:5:9.03:0,9,129	0/0:11,0:11:30.10:0,30,484	0/0:14,0:13:36.12:0,36,571	0/0:41,0:39:99:0,111,1742	0/0:22,0:21:48.12:0,48,725	0/1:6,2:6:23.09:23,0,169	0/1:11,3:13:33.31:33,0,357	1/1:0,1:1:2.99:23,3,0	0/0:5,0:5:9.03:0,9,147	0/0:12,0:12:30.09:0,30,455	0/0:21,0:21:54.17:0,54,857	0/0:9,0:8:17.74:0,18,273	0/0:26,0:26:69.21:0,69,1069	0/0:13,0:13:36.12:0,36,584	0/0:5,0:5:12.04:0,12,182
chr10	15542635	.	CTTTTCTTTTTTTT	C	1861.28	PASS	AB=0.731;AC=9;AF=0.161;AN=56;BaseQRankSum=2.843;DP=460;FS=56.227;HRun=0;HaplotypeScore=139.6695;InbreedingCoeff=0.7188;MQ=52.98;MQ0=25;MQRankSum=-7.710;QD=25.85;ReadPosRankSum=1.246;VQSLOD=0.5164;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:51.08:0,51,2195	0/0:7,0:5:6.02:0,6,225	0/0:44,0:5:10.88:0,11,121	0/0:46,0:11:8.74:0,9,83	0/1:12,7:19:1.62:450,0,2	1/1:11,3:13:8.97:307,9,0	1/1:11,3:9:12.01:420,12,0	0/0:16,0:15:35.98:0,36,921	0/0:13,0:12:21.03:0,21,743	0/0:21,0:21:60.16:0,60,2075	0/0:12,0:12:24.08:0,24,1189	0/0:1,0:1:3.01:0,3,69	0/0:7,0:7:11.90:0,12,352	0/0:7,0:6:6.02:0,6,263	0/0:11,0:11:33.11:0,33,1248	0/0:12,0:11:30.10:0,30,1099	0/0:47,0:44:99:0,114,4784	0/0:22,0:21:39.09:0,39,1567	1/1:8,1:6:14.37:261,14,0	1/1:12,4:15:7.02:571,7,0	0/0:2,0:2:0:0,0,0	0/0:6,0:6:9.03:0,9,372	0/0:16,0:16:45.11:0,45,1371	0/0:23,0:23:60.03:0,60,2218	0/0:11,0:10:21.02:0,21,566	0/0:23,0:23:66.16:0,66,2231	0/0:13,0:13:36.11:0,36,1107	0/0:3,0:3:9.02:0,9,219
chr10	15542640	.	CT	C	1782.23	PASS	AB=0.838;AC=36;AF=0.667;AN=54;BaseQRankSum=-1.853;DP=458;FS=2.636;HRun=16;HaplotypeScore=61.0142;InbreedingCoeff=0.0050;MQ=52.64;MQ0=23;MQRankSum=2.613;QD=5.20;ReadPosRankSum=2.911;VQSLOD=2.2612;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:21,7:28:30.50:189,30,0	1/1:1,2:3:2.93:18,3,0	0/0:42,0:5:0:0,0,0	0/0:45,0:11:0.76:0,1,1	0/1:20,0:20:3.70:4,0,6	1/1:9,0:7:4.04:13,4,0	1/1:9,0:6:2.69:14,3,0	0/1:10,6:14:10.16:47,0,10	1/1:8,1:8:7.12:30,7,0	1/1:8,15:23:20.43:197,20,0	0/1:6,8:13:22.26:84,0,22	1/1:2,0:2:0.96:2,1,0	0/1:5,0:5:4.42:4,0,20	0/0:7,1:7:3:0,3,26	0/1:10,1:11:24.27:85,0,24	1/1:8,4:11:16.94:96,17,0	0/1:37,9:44:24.40:301,0,24	1/1:12,13:24:2.02:113,2,0	0/1:7,0:5:1.42:1,0,15	0/0:18,0:17:1.03:0,1,56	./.	1/1:2,3:5:5.87:36,6,0	1/1:13,7:20:20.84:178,21,0	1/1:13,7:21:38.78:217,39,0	1/1:11,2:12:6.52:49,7,0	0/1:13,12:25:10.59:162,0,11	0/1:10,3:13:9.12:70,0,9	0/1:3,1:4:9.71:10,0,23
chr10	15542664	.	CT	C	545.10	PASS	AB=0.596;AC=8;AF=0.154;AN=52;BaseQRankSum=4.060;DP=388;FS=39.220;HRun=8;HaplotypeScore=55.6161;InbreedingCoeff=0.6020;MQ=46.02;MQ0=21;MQRankSum=-4.661;QD=8.39;ReadPosRankSum=-0.154;VQSLOD=-0.6536;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:31:45.60:0,46,529	./.	0/0:12,0:1:1.25:0,1,3	./.	1/1:5,17:22:27:259,27,0	1/1:2,3:8:9.01:86,9,0	1/1:2,9:9:12.02:116,12,0	0/0:14,0:11:18.05:0,18,215	0/0:8,0:7:6.02:0,6,73	0/0:17,0:17:29.98:0,30,318	0/0:13,0:12:21.06:0,21,242	0/0:4,0:4:6.02:0,6,72	0/0:3,0:3:6.02:0,6,66	0/0:10,0:9:12.49:0,12,130	0/0:12,0:12:30.22:0,30,325	0/0:12,0:11:16.23:0,16,161	0/0:45,0:43:71.43:0,71,791	0/0:26,1:27:12.45:0,12,362	0/1:2,4:5:2.76:100,0,3	0/1:5,11:15:6.82:124,0,7	0/0:2,0:3:2.99:0,3,23	0/0:4,0:4:0:0,0,0	0/0:21,0:21:39.06:0,39,444	0/0:17,0:16:37:0,37,378	0/0:10,0:11:17.69:0,18,168	0/0:21,0:19:39.11:0,39,461	0/0:8,0:8:11.71:0,12,119	0/0:11,0:8:15.05:0,15,181
chr10	15543697	.	T	TTG	1949.15	PASS	AB=0.800;AC=46;AF=0.885;AN=52;BaseQRankSum=0.304;DP=553;FS=3.218;HRun=0;HaplotypeScore=105.1028;InbreedingCoeff=-0.0568;MQ=63.73;MQ0=16;MQRankSum=-2.010;QD=4.04;ReadPosRankSum=-0.506;VQSLOD=2.4245;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:27:14.97:141,15,0	1/1:11,0:11:3.01:40,3,0	./.	./.	1/1:18,0:22:0.67:22,1,0	1/1:20,0:24:2.82:26,3,0	1/1:19,0:19:8.54:74,9,0	1/1:27,0:27:17.86:132,18,0	1/1:17,0:16:5.87:39,6,0	1/1:22,0:22:23.90:212,24,0	1/1:17,0:17:3.74:37,4,0	1/1:12,1:13:9.03:127,9,0	1/1:6,1:7:3.01:44,3,0	1/1:11,0:11:3.01:39,3,0	1/1:10,3:12:3.01:44,3,0	0/0:6,0:6:3:0,3,32	1/1:15,0:15:11.44:91,11,0	1/1:16,1:17:2.84:44,3,0	1/1:10,0:10:3.01:35,3,0	1/1:29,0:27:14.70:130,15,0	1/1:28,0:27:15.48:158,15,0	0/1:11,4:15:19.68:79,0,20	0/1:16,6:22:11.32:120,0,11	0/1:24,13:36:91.32:194,0,91	0/1:22,3:23:26.13:38,0,26	1/1:28,0:28:14.66:106,15,0	1/1:16,0:15:5.59:35,6,0	1/1:9,0:7:10.68:63,11,0
chr10	15544265	.	TTCTCTC	T	3488.71	PASS	AB=0.761;AC=36;AF=0.692;AN=52;BaseQRankSum=-2.581;DP=579;FS=4.034;HRun=0;HaplotypeScore=179.8617;InbreedingCoeff=0.6762;MQ=66.75;MQ0=14;MQRankSum=-2.075;QD=10.03;ReadPosRankSum=2.652;VQSLOD=2.6808;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:19,7:26:6.02:88,6,0	1/1:4,7:11:8.99:142,9,0	./.	0/0:40,0:22:3.48:0,3,85	0/0:25,0:24:17.89:0,18,336	0/0:25,0:23:15.17:0,15,209	0/0:20,0:20:0.23:0,0,1	1/1:18,1:18:3.01:42,3,0	1/1:17,7:24:24.07:445,24,0	1/1:8,4:11:12.04:247,12,0	1/1:9,6:15:9:112,9,0	1/1:11,9:23:15.03:221,15,0	1/1:15,3:18:12.04:228,12,0	1/1:6,5:11:11.97:203,12,0	1/1:18,8:28:15.03:219,15,0	1/1:9,5:14:6.02:124,6,0	1/1:11,2:13:8.33:144,8,0	./.	0/0:15,0:17:17.09:0,17,325	0/0:30,0:30:9.03:0,9,258	0/0:26,0:26:17.94:0,18,478	1/1:11,9:21:2.98:50,3,0	0/1:13,4:19:0.05:0,0,0	0/1:11,3:16:0:0,0,0	1/1:12,2:16:6.02:124,6,0	1/1:17,9:27:35.81:702,36,0	1/1:10,6:18:12.04:239,12,0	1/1:8,4:13:5.15:160,5,0
chr10	15544312	.	TGTGC	T	3391.54	PASS	AB=0.998;AC=34;AF=0.654;AN=52;BaseQRankSum=-1.611;DP=576;FS=17.637;HRun=0;HaplotypeScore=207.7390;InbreedingCoeff=-0.2934;MQ=40.24;MQ0=36;MQRankSum=6.463;QD=6.21;ReadPosRankSum=2.139;VQSLOD=1.3681;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:37,0:36:3.53:194,0,4	0/1:10,0:10:3.65:79,0,4	./.	./.	0/1:25,0:24:1.54:39,0,2	0/1:27,0:26:27.88:28,0,68	0/1:16,0:15:0.07:0,0,0	0/1:33,0:31:70.68:71,0,252	0/1:23,0:21:20.74:199,0,21	0/1:28,0:27:68.62:368,0,69	1/1:21,0:21:5.90:59,6,0	0/1:26,0:26:23.64:67,0,24	0/1:18,0:18:11.83:186,0,12	0/1:25,0:25:13.74:227,0,14	1/1:21,0:20:8.77:72,9,0	1/1:14,0:13:0.05:122,0,0	0/1:20,0:20:1.93:272,0,2	1/1:10,0:10:15.02:172,15,0	0/1:11,0:11:3.89:101,0,4	1/1:17,1:17:8.02:88,8,0	1/1:23,1:21:17.91:112,18,0	1/1:25,1:26:14.74:122,15,0	1/1:21,0:21:2.89:23,3,0	1/1:19,0:19:5.98:47,6,0	0/1:15,0:14:6.90:47,0,7	0/1:27,1:28:58.50:398,0,59	0/1:30,0:28:13.66:301,0,14	0/0:5,0:4:8.97:0,9,83
chr10	15544314	.	TGC	T	769.81	PASS	AB=0.988;AC=20;AF=0.385;AN=52;BaseQRankSum=-2.142;DP=569;FS=22.390;HRun=0;HaplotypeScore=202.8435;InbreedingCoeff=0.0756;MQ=40.90;MQ0=36;MQRankSum=1.776;QD=2.37;ReadPosRankSum=-1.050;VQSLOD=0.6537;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:35:11.37:0,11,49	0/1:10,0:10:9.60:18,0,10	./.	./.	1/1:24,0:23:0.62:60,1,0	0/1:27,0:26:29.36:29,0,30	1/1:17,1:17:2.53:20,3,0	0/1:32,0:30:1.63:2,0,308	0/0:21,0:19:15.52:0,16,80	0/1:29,0:28:99:173,0,140	0/0:18,1:19:1.05:0,1,7	0/0:24,0:24:11.54:0,12,67	0/1:18,0:18:19.16:19,0,41	0/0:25,0:25:2.74:0,3,50	0/1:21,0:20:0.71:1,0,7	0/0:14,0:13:11.59:0,12,42	0/0:21,0:21:5.79:0,6,58	0/1:9,1:10:8.27:21,0,8	1/1:9,0:9:6.78:128,7,0	1/1:6,13:18:11.83:125,12,0	1/1:20,3:20:18.50:230,19,0	0/1:25,0:25:2.65:3,0,14	0/0:20,0:20:2.53:0,3,10	0/0:18,0:18:5.02:0,5,19	0/0:15,0:14:2.55:0,3,8	0/1:28,1:29:83.32:83,0,111	0/1:31,0:29:5.42:5,0,77	0/0:5,0:4:8.94:0,9,66
chr10	15544316	.	CGTGT	C	5564.67	PASS	AB=0.920;AC=40;AF=0.769;AN=52;BaseQRankSum=-6.815;DP=578;FS=19.604;HRun=0;HaplotypeScore=194.9571;InbreedingCoeff=0.4567;MQ=41.50;MQ0=37;MQRankSum=3.032;QD=11.97;ReadPosRankSum=1.814;VQSLOD=3.1742;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:15,21:35:10.26:369,10,0	1/1:10,1:11:12.04:177,12,0	./.	./.	0/0:25,0:24:7.07:0,7,36	0/0:27,0:26:18.37:0,18,113	0/1:18,0:17:0.08:0,0,0	1/1:21,9:28:2.13:232,2,0	1/1:9,11:19:24.08:375,24,0	1/1:10,19:28:15.23:641,15,0	1/1:8,8:19:5.92:96,6,0	1/1:10,14:24:7.59:142,8,0	1/1:6,10:17:24.07:352,24,0	1/1:10,16:26:25.90:390,26,0	1/1:12,10:22:8.85:120,9,0	1/1:6,8:13:15.05:241,15,0	1/1:6,17:23:24.08:474,24,0	1/1:4,8:11:17.85:249,18,0	0/0:9,0:9:6.44:0,6,51	0/1:19,0:18:16.74:17,0,29	0/0:23,0:20:9.60:0,10,37	1/1:11,13:25:15.04:221,15,0	1/1:9,10:20:2.91:48,3,0	1/1:5,13:18:6.02:96,6,0	0/1:8,7:14:25.73:87,0,26	1/1:14,14:29:40.91:622,41,0	1/1:11,17:29:32.51:600,33,0	0/1:6,0:5:12.12:12,0,44
chr10	15544345	.	GTGTA	G	2400.21	PASS	AB=0.973;AC=21;AF=0.375;AN=56;BaseQRankSum=6.842;DP=580;FS=3.912;HRun=0;HaplotypeScore=163.8567;InbreedingCoeff=-0.4608;MQ=52.55;MQ0=16;MQRankSum=0.010;QD=5.62;ReadPosRankSum=10.208;VQSLOD=1.2378;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:31,1:31:81.77:164,0,82	0/1:8,0:8:31.29:77,0,31	0/0:28,0:12:5.42:0,5,205	0/0:33,0:17:31.84:0,32,334	0/0:25,0:25:9.98:0,10,51	0/1:31,0:30:0.23:0,0,135	0/0:15,0:15:2.92:0,3,17	0/1:25,0:22:59.09:59,0,271	0/1:22,1:21:34.98:206,0,35	0/1:30,2:32:99:287,0,166	0/1:15,1:16:34.10:35,0,34	0/1:18,0:18:55.06:78,0,55	0/1:16,0:16:39.67:179,0,40	0/1:23,0:23:57.98:234,0,58	0/1:18,3:21:59.27:59,0,101	0/1:20,0:19:98.40:98,0,175	0/1:23,0:23:46.41:244,0,46	1/1:11,0:10:15.45:132,15,0	0/0:11,0:11:29.78:0,30,260	0/0:17,0:16:19.19:0,19,200	0/0:16,0:16:18:0,18,171	0/1:21,0:21:32.49:82,0,32	0/1:14,2:16:15.10:18,0,15	0/1:19,0:19:44.97:45,0,100	0/1:17,1:17:20.59:21,0,156	0/1:27,1:28:99:270,0,167	0/1:26,0:23:62.46:271,0,62	0/0:8,0:7:8.46:0,8,70
chr10	15544361	.	GTCTC	G	292.50	PASS	AB=0.575;AC=4;AF=0.071;AN=56;BaseQRankSum=2.217;DP=618;FS=2.712;HRun=0;HaplotypeScore=162.5643;InbreedingCoeff=0.5072;MQ=63.67;MQ0=11;MQRankSum=-2.103;QD=4.12;ReadPosRankSum=-0.439;VQSLOD=2.5032;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:36:51.12:0,51,1338	0/0:10,0:10:30.10:0,30,702	0/0:39,0:21:52.50:0,53,1064	0/0:38,0:23:48.61:0,49,1129	0/1:6,15:21:2.10:102,0,2	0/1:8,26:34:37.91:185,0,38	1/1:3,13:16:5.83:111,6,0	0/0:32,0:29:81.27:0,81,1836	0/0:20,0:19:39.08:0,39,880	0/0:31,0:31:81.28:0,81,1965	0/0:10,0:10:15.05:0,15,396	0/0:17,0:17:24.08:0,24,638	0/0:16,0:16:39.13:0,39,862	0/0:21,0:21:39.13:0,39,947	0/0:23,0:23:42.14:0,42,1084	0/0:21,0:20:54.19:0,54,1406	0/0:27,0:27:63.22:0,63,1487	0/0:11,0:11:24.05:0,24,541	0/0:15,0:15:39.04:0,39,819	0/0:13,0:13:24.07:0,24,585	0/0:22,0:22:36.12:0,36,912	0/0:23,0:23:38.70:0,39,1017	0/0:16,0:16:14.82:0,15,399	0/0:23,0:23:36.12:0,36,914	0/0:23,0:22:42.14:0,42,1105	0/0:25,0:25:66.23:0,66,1731	0/0:28,0:26:66.13:0,66,1437	0/0:5,0:4:12.04:0,12,320
chr10	15545218	.	GAA	G	2643.95	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.671;DP=594;FS=1.720;HRun=2;HaplotypeScore=72.9275;InbreedingCoeff=0.9631;MQ=53.69;MQ0=36;MQRankSum=0.532;QD=35.73;ReadPosRankSum=3.952;VQSLOD=4.0064;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:28:75.20:0,75,1480	0/0:2,0:2:6.02:0,6,122	0/0:25,0:17:48.13:0,48,912	0/0:17,0:14:42.14:0,42,830	0/0:20,0:19:54.19:0,54,1097	0/0:21,0:18:54.02:0,54,971	0/0:19,0:18:53.95:0,54,891	0/0:36,0:36:99:0,108,2114	0/0:12,0:12:36.12:0,36,710	0/0:25,0:25:75.25:0,75,1489	0/0:16,0:16:42.06:0,42,809	0/0:30,0:29:84.09:0,84,1564	0/0:21,0:20:57.20:0,57,1145	0/0:16,0:14:42.14:0,42,854	0/0:18,0:18:51.18:0,51,1036	0/0:18,0:17:45.15:0,45,914	0/0:28,0:24:63.22:0,63,1280	0/0:17,0:11:30.10:0,30,597	1/1:1,16:16:48.16:781,48,0	1/1:3,22:22:60.20:978,60,0	1/1:7,25:25:63.11:1028,63,0	0/0:12,0:12:36.08:0,36,683	0/0:23,0:23:66.16:0,66,1285	0/0:15,0:14:39.07:0,39,733	0/0:27,0:27:66.54:0,67,1217	0/0:25,0:24:72.20:0,72,1408	0/0:35,0:33:89.80:0,90,1652	0/0:11,0:11:27.09:0,27,549
chr10	15546656	.	CCCCTCCCTCCCT	C	7444.02	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=0.367;DP=252;FS=0.890;HRun=0;HaplotypeScore=93.3325;InbreedingCoeff=0.6959;MQ=65.10;MQ0=0;MQRankSum=-4.659;QD=37.98;ReadPosRankSum=1.969;VQSLOD=4.0346;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,11:18:21.07:713,21,0	1/1:1,1:2:3.01:107,3,0	0/0:7,0:6:3.88:0,4,26	0/0:7,0:7:8.95:0,9,120	0/0:0,0:4:6.02:0,6,154	0/0:1,0:8:21.07:0,21,562	0/0:3,0:5:9.03:0,9,218	1/1:16,7:23:21.03:456,21,0	1/1:4,6:10:18.06:607,18,0	1/1:3,14:17:42.14:1363,42,0	1/1:2,6:8:9.03:320,9,0	1/1:5,3:8:6.02:214,6,0	1/1:3,6:9:12.04:427,12,0	1/1:6,6:12:15.05:534,15,0	1/1:4,2:6:3.01:74,3,0	1/1:4,5:9:12.04:394,12,0	1/1:4,8:12:11.83:373,12,0	1/1:6,2:8:6.02:214,6,0	0/0:12,0:12:18.06:0,18,804	0/0:2,0:2:3.01:0,3,125	0/0:10,0:10:21.07:0,21,918	1/1:7,2:9:6.02:180,6,0	1/1:2,5:7:6.49:214,6,0	1/1:4,2:6:8.99:233,9,0	1/1:1,4:5:3.01:107,3,0	1/1:6,5:10:9.03:275,9,0	1/1:8,4:12:9.03:320,9,0	1/1:0,4:4:9.03:320,9,0
chr10	15547963	.	TG	T	10248.14	PASS	AB=0.923;AC=41;AF=0.732;AN=56;BaseQRankSum=-2.863;DP=665;FS=0.372;HRun=9;HaplotypeScore=82.6759;InbreedingCoeff=0.8731;MQ=67.37;MQ0=2;MQRankSum=0.893;QD=20.58;ReadPosRankSum=3.127;VQSLOD=5.3240;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,33:36:81.04:741,81,0	1/1:3,4:7:12:110,12,0	0/0:19,0:14:3.21:0,3,117	0/1:10,0:9:23.11:23,0,27	0/0:26,1:27:66.16:0,66,739	0/0:20,0:20:60.17:0,60,682	0/0:24,0:24:60.10:0,60,657	1/1:4,30:34:55.43:761,55,0	1/1:2,17:19:48.02:439,48,0	1/1:8,24:32:69.01:627,69,0	1/1:3,16:19:42.01:382,42,0	1/1:0,21:21:51.02:467,51,0	1/1:6,14:20:36.01:330,36,0	1/1:3,24:27:63.03:577,63,0	1/1:2,13:15:33.02:302,33,0	1/1:2,17:19:51.03:467,51,0	1/1:8,34:42:90.04:824,90,0	1/1:0,28:28:81.04:741,81,0	0/0:16,0:16:33.10:0,33,381	0/0:21,0:21:42.11:0,42,480	0/0:39,0:39:90.25:0,90,1028	1/1:3,17:20:51.03:467,51,0	1/1:3,17:20:45.02:412,45,0	1/1:6,16:22:42.01:384,42,0	1/1:5,17:22:45.02:412,45,0	1/1:4,22:26:66.03:603,66,0	1/1:2,40:42:99:906,99,0	1/1:0,15:15:30.02:275,30,0
chr10	15548313	.	TTGACCCCAG	T	8253.58	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=13.934;DP=545;FS=1.887;HRun=0;HaplotypeScore=153.5081;InbreedingCoeff=0.9847;MQ=73.70;MQ0=0;MQRankSum=-14.376;QD=70.54;ReadPosRankSum=0.279;VQSLOD=5.0428;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:87.30:0,87,4123	0/0:9,0:9:27.08:0,27,1092	0/0:14,0:13:27.02:0,27,821	0/0:12,0:12:7.92:0,8,1365	1/1:6,21:27:57.20:1727,57,0	1/1:2,19:21:48.16:1455,48,0	1/1:3,15:18:42.14:1272,42,0	0/0:37,0:37:99:0,102,4461	0/0:15,0:15:42.13:0,42,1910	0/0:26,0:26:78.27:0,78,3656	0/0:17,0:17:51.18:0,51,2291	0/0:17,0:17:51.18:0,51,2238	0/0:13,0:13:39.12:0,39,1757	0/0:14,0:14:42.14:0,42,1911	0/0:17,0:17:51.17:0,51,2265	0/0:18,0:18:48.16:0,48,2142	0/0:26,0:26:78.27:0,78,3745	0/0:23,0:23:66.23:0,66,3112	1/1:2,10:12:27.09:778,27,0	1/1:0,24:24:69.24:2091,69,0	1/1:2,13:15:34.67:932,35,0	0/0:22,0:22:60.21:0,60,2893	0/0:22,0:22:66.21:0,66,2873	0/0:26,0:26:78.26:0,78,3412	0/0:21,0:21:60.21:0,60,2719	0/0:19,0:19:57.20:0,57,2676	0/0:13,0:13:39.13:0,39,1760	0/0:16,0:16:45.14:0,45,1944
chr10	15549466	.	G	GT	3089.01	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-7.833;DP=522;FS=2.908;HRun=9;HaplotypeScore=52.8951;InbreedingCoeff=0.9829;MQ=80.61;MQ0=0;MQRankSum=1.267;QD=24.32;ReadPosRankSum=-2.782;VQSLOD=3.4729;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:77.31:0,77,653	0/0:10,0:10:29.99:0,30,260	0/0:20,0:20:44.91:0,45,380	0/0:11,0:11:11.97:0,12,101	1/1:4,18:22:31.03:556,31,0	1/1:0,14:14:39.11:431,39,0	1/1:3,19:23:47.92:511,48,0	0/0:22,0:22:56.96:0,57,489	0/0:20,0:20:53.98:0,54,466	0/0:27,0:27:68.97:0,69,597	0/0:16,0:16:44.97:0,45,385	0/0:15,0:15:35.97:0,36,310	0/0:15,0:15:44.99:0,45,391	0/0:19,0:19:53.93:0,54,455	0/0:18,0:18:19.07:0,19,267	0/0:9,0:9:20.99:0,21,182	0/0:29,0:28:77.98:0,78,677	0/0:22,0:22:43.86:0,44,447	1/1:5,19:24:57.13:620,57,0	1/1:5,17:22:10.92:535,11,0	1/1:2,20:22:57.14:622,57,0	0/0:19,0:19:47.97:0,48,413	0/0:21,0:21:56.97:0,57,492	0/0:21,0:21:53.97:0,54,463	0/0:10,0:10:26.21:0,26,215	0/0:14,0:14:29.97:0,30,258	0/0:18,0:18:41.95:0,42,360	0/0:11,0:11:29.99:0,30,260
chr10	15550615	.	TGAGAGAGAGAGAGAGAGAGA	T	1130.14	PASS	AB=0.952;AC=12;AF=0.222;AN=54;BaseQRankSum=2.972;DP=560;FS=24.163;HRun=0;HaplotypeScore=249.7243;InbreedingCoeff=0.5578;MQ=70.15;MQ0=11;MQRankSum=-2.309;QD=9.19;ReadPosRankSum=-0.588;VQSLOD=0.8517;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:45.15:0,45,2536	./.	0/0:46,0:27:3.39:0,3,9	0/0:51,0:19:3.01:0,3,37	0/0:18,0:18:15.05:0,15,1267	0/0:24,0:22:36.32:0,36,2679	0/0:21,0:22:20.64:0,21,1262	0/0:18,0:18:3.93:0,4,12	1/1:16,3:19:2.90:73,3,0	0/1:17,2:19:2.98:199,0,3	0/1:18,0:18:5.02:5,0,12	0/0:8,0:8:12.51:0,13,483	0/0:13,0:13:24.97:0,25,1292	0/0:26,0:26:27.08:0,27,1335	0/0:15,0:19:18.06:0,18,659	0/0:14,0:15:3.01:0,3,101	1/1:7,1:8:8.20:281,8,0	0/0:22,0:22:31.24:0,31,1521	0/0:14,0:14:16.87:0,17,1256	0/0:17,0:17:12.01:0,12,362	0/0:18,0:18:11.96:0,12,541	0/0:14,0:14:9.03:0,9,468	0/0:19,0:19:12.03:0,12,935	0/0:15,0:14:21.07:0,21,1569	0/0:17,0:18:21.07:0,21,970	1/1:22,0:22:2.87:99,3,0	1/1:20,9:28:9.03:476,9,0	1/1:6,0:8:3.01:139,3,0
chr10	15550660	.	G	GAA	1592.36	PASS	AB=0.738;AC=7;AF=0.125;AN=56;BaseQRankSum=2.324;DP=601;FS=5.199;HRun=1;HaplotypeScore=95.4141;InbreedingCoeff=0.3884;MQ=66.97;MQ0=24;MQRankSum=1.128;QD=10.48;ReadPosRankSum=-2.881;VQSLOD=-0.5679;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:37:92.78:0,93,747	0/0:6,0:6:14.98:0,15,124	0/0:27,0:17:31.87:0,32,289	0/0:43,0:18:19.40:0,19,311	0/1:5,16:25:2.38:276,0,2	0/1:30,0:28:5.32:492,0,5	0/1:7,22:27:26.92:78,0,27	0/0:17,0:17:50.90:0,51,438	0/0:12,0:12:23.96:0,24,196	0/0:13,0:13:35.49:0,35,276	0/0:8,0:8:23.94:0,24,195	0/0:21,0:21:44.35:0,44,359	0/0:23,0:22:54.17:0,54,438	0/0:25,0:25:56.89:0,57,465	0/0:25,0:25:50.93:0,51,421	0/0:10,0:10:23.74:0,24,195	0/0:16,0:16:38.82:0,39,305	0/0:31,0:30:86.47:0,86,686	0/1:20,0:20:21.39:308,0,21	0/1:6,0:24:3.90:203,0,4	1/1:23,0:22:28.29:372,28,0	0/0:20,0:20:38.96:0,39,325	0/0:19,0:19:29.91:0,30,246	0/0:21,0:20:50.76:0,51,415	0/0:27,0:26:50.94:0,51,425	0/0:15,0:14:38.85:0,39,320	0/0:21,0:21:35.49:0,35,244	0/0:9,0:9:20.91:0,21,165
chr10	15551932	.	G	GCTGGCCCTGGCCCTGGCC	13100.63	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=2.246;DP=676;FS=12.723;HRun=0;HaplotypeScore=301.3504;InbreedingCoeff=0.9574;MQ=80.01;MQ0=0;MQRankSum=-11.377;QD=82.92;ReadPosRankSum=-2.381;VQSLOD=3.1285;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,126,5590	0/0:8,0:8:21.07:0,21,941	0/0:22,0:22:21.01:0,21,522	0/0:15,0:15:11.20:0,11,460	1/1:12,1:19:5.19:274,5,0	1/1:12,6:27:48.16:3487,48,0	1/1:37,0:37:93.26:5326,93,0	0/0:22,0:22:42.13:0,42,1605	0/0:18,0:18:48.15:0,48,2244	0/0:27,0:26:60.19:0,60,2500	0/0:21,0:21:51.15:0,51,2086	0/0:33,0:33:90.28:0,90,3961	0/0:21,0:21:39.12:0,39,1703	0/0:30,0:30:72.24:0,72,3335	0/0:24,0:24:57.12:0,57,2342	0/0:30,0:30:75.20:0,75,3029	0/0:30,0:30:69.16:0,69,2843	0/0:19,0:19:45.14:0,45,2095	1/1:11,3:20:36.08:2256,36,0	1/1:9,4:20:17.82:1189,18,0	1/1:23,6:35:12.04:568,12,0	0/0:23,0:23:54.19:0,54,2136	0/0:19,0:19:39.09:0,39,1657	0/0:26,0:26:69.19:0,69,2930	0/0:14,0:14:33.11:0,33,1589	0/0:27,0:27:57.17:0,57,2320	0/0:24,0:24:60.21:0,60,2746	0/0:13,0:13:27.09:0,27,1156
chr10	15555188	.	GC	G	4941.10	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=10.572;DP=667;FS=24.689;HRun=4;HaplotypeScore=64.2454;InbreedingCoeff=0.9997;MQ=81.45;MQ0=0;MQRankSum=0.209;QD=29.59;ReadPosRankSum=0.712;VQSLOD=2.9459;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:90.26:0,90,1212	0/0:9,0:9:27.09:0,27,377	0/0:22,0:22:60.11:0,60,718	0/0:18,0:18:32.23:0,32,433	1/1:0,14:14:39.12:468,39,0	1/1:0,19:19:45.14:540,45,0	1/1:1,35:36:87.27:1043,87,0	0/0:18,0:18:51.16:0,51,698	0/0:30,0:30:84.26:0,84,1134	0/0:17,0:17:45.14:0,45,599	0/0:12,0:12:36.12:0,36,500	0/0:23,0:23:66.19:0,66,880	0/0:31,0:31:93.28:0,93,1264	0/0:37,0:37:99:0,111,1503	0/0:27,0:27:81.24:0,81,1112	0/0:23,0:23:66.20:0,66,887	0/0:42,0:42:99:0,126,1755	0/0:19,0:19:57.12:0,57,740	1/1:2,19:21:57.11:644,57,0	1/1:0,14:14:39.05:449,39,0	1/1:2,61:63:99:1798,150,0	0/0:18,0:18:51.05:0,51,620	0/0:24,0:24:61.74:0,62,842	0/0:23,0:23:69.19:0,69,928	0/0:18,0:18:48.16:0,48,669	0/0:16,0:16:48.15:0,48,656	0/0:21,0:21:57.16:0,57,755	0/0:20,0:20:60.15:0,60,783
chr10	15556540	.	A	ATC	11154.65	PASS	AC=40;AF=0.909;AN=44;BaseQRankSum=-3.219;DP=411;FS=3.341;HRun=0;HaplotypeScore=54.9282;InbreedingCoeff=0.9295;MQ=80.29;MQ0=53;MQRankSum=-7.849;QD=32.43;ReadPosRankSum=6.562;VQSLOD=6.6314;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,38:34:81.28:1454,81,0	1/1:0,9:6:15.05:269,15,0	0/0:25,0:25:69.18:0,69,901	0/0:15,0:15:36.11:0,36,496	./.	./.	./.	1/1:2,15:9:24.05:399,24,0	1/1:3,18:20:45.15:775,45,0	1/1:1,13:12:33.07:523,33,0	1/1:2,10:9:21.07:376,21,0	1/1:1,16:11:30.10:538,30,0	1/1:2,15:14:33.11:592,33,0	1/1:2,16:16:36.12:646,36,0	1/1:2,14:13:30.10:538,30,0	1/1:0,8:4:9.03:162,9,0	1/1:5,24:28:66.22:1159,66,0	1/1:5,22:23:54.10:903,54,0	./.	./.	./.	1/1:2,6:6:15.05:268,15,0	1/1:2,12:7:18.06:323,18,0	1/1:1,13:13:27.09:477,27,0	1/1:1,14:12:30.10:539,30,0	1/1:1,12:7:21.06:349,21,0	1/1:4,18:17:36.12:647,36,0	1/1:1,4:5:12.04:216,12,0
chr10	15557267	.	C	CT	4355.99	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=3.722;DP=567;FS=3.606;HRun=1;HaplotypeScore=59.1051;InbreedingCoeff=0.9996;MQ=73.40;MQ0=0;MQRankSum=1.442;QD=37.23;ReadPosRankSum=-0.660;VQSLOD=4.8958;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:82.82:0,83,1055	0/0:13,0:13:32.68:0,33,428	0/0:18,0:16:44.73:0,45,546	0/0:26,0:26:72.17:0,72,889	1/1:1,19:18:48.03:644,48,0	1/1:0,27:27:75.25:1124,75,0	1/1:0,16:16:42.14:629,42,0	0/0:38,0:38:99:0,99,1272	0/0:18,0:18:54.18:0,54,701	0/0:13,0:13:39.13:0,39,507	0/0:11,0:11:30.08:0,30,374	0/0:28,0:28:81.26:0,81,1050	0/0:14,0:14:42.14:0,42,544	0/0:21,0:21:63.20:0,63,818	0/0:24,0:24:69.22:0,69,895	0/0:24,0:24:72.22:0,72,921	0/0:19,0:19:57.19:0,57,740	0/0:16,0:16:45.15:0,45,584	1/1:0,12:10:30.07:411,30,0	1/1:0,20:18:45.11:649,45,0	1/1:1,21:22:60.20:899,60,0	0/0:13,0:13:33.11:0,33,428	0/0:21,0:21:60.19:0,60,775	0/0:24,0:24:69.22:0,69,896	0/0:30,0:30:81.26:0,81,1050	0/0:12,0:12:36.12:0,36,468	0/0:22,0:22:66.21:0,66,857	0/0:15,0:15:45.15:0,45,584
chr10	15557606	.	T	TG	3521.10	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-3.474;DP=639;FS=24.093;HRun=2;HaplotypeScore=95.0085;InbreedingCoeff=0.9976;MQ=66.06;MQ0=7;MQRankSum=-4.479;QD=28.86;ReadPosRankSum=1.453;VQSLOD=1.9973;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,105,1301	0/0:10,0:10:27.08:0,27,335	0/0:26,0:17:46.68:0,47,537	0/0:17,0:13:39.03:0,39,448	1/1:1,24:25:51.17:734,51,0	1/1:1,22:21:42.14:604,42,0	1/1:1,17:16:30.10:431,30,0	0/0:30,0:26:72.19:0,72,848	0/0:37,0:37:99:0,111,1375	0/0:25,0:25:75.23:0,75,919	0/0:17,0:17:48.15:0,48,594	0/0:28,0:28:78.24:0,78,967	0/0:26,0:26:75.22:0,75,917	0/0:33,0:32:90.28:0,90,1116	0/0:21,0:21:63.18:0,63,767	0/0:26,0:26:75.24:0,75,929	0/0:25,0:25:75.21:0,75,912	0/0:16,0:16:45.14:0,45,558	1/1:2,22:17:45.11:604,45,0	1/1:2,21:23:63.21:889,63,0	1/1:0,9:9:18.06:259,18,0	0/0:22,0:22:57.17:0,57,695	0/0:22,0:22:63.20:0,63,780	0/0:17,0:17:48.13:0,48,580	0/0:22,0:22:66.19:0,66,806	0/0:27,0:27:81.25:0,81,1004	0/0:26,0:26:78.25:0,78,967	0/0:9,0:8:24.05:0,24,283
chr10	15557757	.	GTAC	G	1020.58	PASS	AB=1.000;AC=7;AF=0.135;AN=52;BaseQRankSum=9.737;DP=700;FS=21.475;HRun=0;HaplotypeScore=126.4122;InbreedingCoeff=0.7854;MQ=53.38;MQ0=24;MQRankSum=-7.570;QD=10.97;ReadPosRankSum=-3.162;VQSLOD=0.9434;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:78.25:0,78,1719	0/0:13,0:13:39.13:0,39,887	0/0:14,0:3:9.02:0,9,122	0/0:22,0:2:6.02:0,6,68	1/1:17,10:26:14.80:162,15,0	1/1:14,9:23:42.65:607,43,0	./.	0/0:46,0:37:99:0,108,2388	0/0:38,0:38:99:0,99,2081	0/0:33,0:32:90.31:0,90,2060	0/0:29,0:29:81.28:0,81,1841	0/0:39,0:39:99:0,114,2615	0/0:28,0:28:78.27:0,78,1775	0/0:28,0:28:78.25:0,78,1706	0/0:25,0:25:60.21:0,60,1377	0/0:35,0:35:96.32:0,96,2131	0/0:34,0:32:54.19:0,54,1231	0/0:26,0:25:54.16:0,54,1198	0/1:10,0:6:29.92:39,0,30	1/1:33,0:28:32.01:356,32,0	./.	0/0:16,0:16:48.15:0,48,1062	0/0:20,0:20:51.16:0,51,1114	0/0:17,0:17:45.15:0,45,1028	0/0:22,0:22:60.21:0,60,1357	0/0:32,0:32:96.31:0,96,2117	0/0:21,0:20:63.22:0,63,1435	0/0:23,0:23:60.19:0,60,1330
chr10	15557759	.	A	AT	931.15	PASS	AB=0.900;AC=7;AF=0.135;AN=52;BaseQRankSum=9.631;DP=691;FS=19.923;HRun=1;HaplotypeScore=97.7764;InbreedingCoeff=0.7122;MQ=53.80;MQ0=25;MQRankSum=-7.980;QD=11.64;ReadPosRankSum=-3.055;VQSLOD=0.2306;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:81.25:0,81,1110	0/0:13,0:13:39.13:0,39,545	0/0:13,0:3:9.02:0,9,98	0/0:22,0:2:6.02:0,6,71	1/1:16,7:22:6.79:116,7,0	1/1:12,8:20:34.83:498,35,0	./.	0/0:45,0:36:99:0,108,1510	0/0:37,0:37:99:0,99,1360	0/0:31,0:30:90.30:0,90,1259	0/0:29,0:29:84.27:0,84,1158	0/0:39,0:39:99:0,114,1594	0/0:29,0:29:78.26:0,78,1091	0/0:29,0:29:81.24:0,81,1098	0/0:26,0:26:60.20:0,60,839	0/0:37,0:37:99:0,99,1366	0/0:34,0:32:54.18:0,54,755	0/0:26,0:25:54.18:0,54,753	0/1:4,1:5:23.42:48,0,23	1/1:10,14:24:4.96:401,5,0	./.	0/0:16,0:16:48.14:0,48,653	0/0:20,0:19:51.17:0,51,712	0/0:17,0:17:45.15:0,45,629	0/0:23,0:23:60.10:0,60,839	0/0:34,0:34:99:0,99,1367	0/0:22,0:21:66.21:0,66,906	0/0:23,0:23:60.20:0,60,837
chr10	15557763	.	T	TGTA	527.14	PASS	AB=0.759;AC=2;AF=0.040;AN=50;BaseQRankSum=6.833;DP=680;FS=20.491;HRun=0;HaplotypeScore=125.7234;InbreedingCoeff=0.0438;MQ=52.85;MQ0=27;MQRankSum=-5.035;QD=12.86;ReadPosRankSum=-1.696;VQSLOD=1.6951;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:75.24:0,75,1347	0/0:12,0:12:36.12:0,36,671	0/0:13,0:2:6.02:0,6,99	./.	0/1:15,7:21:46.22:105,0,46	0/1:13,6:19:8.86:510,0,9	./.	0/0:43,0:34:99:0,102,1798	0/0:38,0:38:96.31:0,96,1683	0/0:32,0:31:93.31:0,93,1691	0/0:31,0:31:87.26:0,87,1483	0/0:39,0:39:99:0,114,2068	0/0:30,0:30:81.27:0,81,1468	0/0:29,0:29:75.23:0,75,1312	0/0:25,0:25:63.22:0,63,1170	0/0:37,0:37:99:0,105,1926	0/0:33,0:32:54.15:0,54,943	0/0:24,0:23:51.16:0,51,919	0/0:9,0:5:6.80:0,7,52	0/0:28,0:24:16.93:0,17,238	./.	0/0:16,0:16:48.16:0,48,876	0/0:19,0:18:48.16:0,48,866	0/0:15,0:15:39.13:0,39,698	0/0:23,0:23:63.67:0,64,1111	0/0:34,0:34:99:0,102,1848	0/0:23,0:22:69.22:0,69,1215	0/0:23,0:23:57.09:0,57,846
chr10	15557766	.	ACG	A	1232.73	PASS	AC=8;AF=0.160;AN=50;BaseQRankSum=11.624;DP=667;FS=1.859;HRun=0;HaplotypeScore=111.8364;InbreedingCoeff=0.9422;MQ=52.72;MQ0=29;MQRankSum=-10.985;QD=16.66;ReadPosRankSum=-6.486;VQSLOD=2.1878;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:75.19:0,75,1344	0/0:12,0:12:36.12:0,36,682	0/0:14,0:2:5.93:0,6,71	./.	1/1:7,15:21:29.90:254,30,0	1/1:7,11:18:51.08:513,51,0	./.	0/0:42,0:31:93.29:0,93,1703	0/0:37,0:37:99:0,99,1868	0/0:32,0:30:90.30:0,90,1774	0/0:30,0:30:84.20:0,84,1487	0/0:39,0:39:99:0,114,2218	0/0:29,0:29:78.20:0,78,1441	0/0:28,0:28:75.26:0,75,1473	0/0:26,0:26:66.20:0,66,1225	0/0:37,0:37:99:0,105,1991	0/0:33,0:31:51.17:0,51,991	0/0:24,0:23:48.09:0,48,799	1/1:7,2:5:6.47:60,6,0	1/1:15,10:21:55.84:555,56,0	./.	0/0:17,0:17:51.16:0,51,946	0/0:18,0:17:45.15:0,45,866	0/0:14,0:14:36.04:0,36,635	0/0:22,0:22:60.19:0,60,1159	0/0:37,0:37:99:0,111,2112	0/0:24,0:23:72.24:0,72,1317	0/0:16,0:16:36.12:0,36,730
chr10	15557768	.	G	GTA	696.14	PASS	AB=0.900;AC=7;AF=0.140;AN=50;BaseQRankSum=10.775;DP=666;FS=0.000;HRun=0;HaplotypeScore=113.4183;InbreedingCoeff=0.8556;MQ=52.62;MQ0=29;MQRankSum=-10.259;QD=9.54;ReadPosRankSum=-6.333;VQSLOD=1.5489;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:69.23:0,69,1038	0/0:12,0:12:36.12:0,36,548	0/0:14,0:2:5.99:0,6,67	./.	1/1:22,0:21:28.36:175,28,0	1/1:17,0:17:47.97:268,48,0	./.	0/0:42,0:31:87.29:0,87,1298	0/0:36,0:36:93.30:0,93,1400	0/0:33,0:31:87.29:0,87,1312	0/0:28,0:28:75.25:0,75,1134	0/0:41,0:41:99:0,117,1738	0/0:29,0:29:72.23:0,72,1072	0/0:28,0:28:75.24:0,75,1123	0/0:25,0:25:60.20:0,60,913	0/0:36,0:36:99:0,102,1509	0/0:33,0:31:51.17:0,51,773	0/0:24,0:23:42.10:0,42,603	0/1:8,1:5:5.37:8,0,5	1/1:11,14:21:34.15:388,34,0	./.	0/0:16,0:16:48.16:0,48,729	0/0:19,0:18:45.14:0,45,663	0/0:15,0:15:30.10:0,30,457	0/0:22,0:22:56.96:0,57,867	0/0:36,0:36:99:0,108,1602	0/0:25,0:24:72.20:0,72,1049	0/0:17,0:17:36.12:0,36,551
chr10	15558190	.	G	GAATA	3813.91	PASS	AB=0.972;AC=12;AF=0.214;AN=56;BaseQRankSum=5.766;DP=587;FS=2.138;HRun=0;HaplotypeScore=102.7788;InbreedingCoeff=0.8045;MQ=59.39;MQ0=3;MQRankSum=-1.887;QD=29.34;ReadPosRankSum=2.620;VQSLOD=3.2073;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:75.20:0,75,1263	0/0:9,0:9:27.07:0,27,445	0/1:16,0:11:0.93:1,0,320	0/0:20,0:13:22.49:0,22,353	1/1:0,22:22:48.16:1191,48,0	1/1:1,26:28:57.20:1508,57,0	1/1:0,4:4:6.02:161,6,0	0/0:33,0:33:93.28:0,93,1534	0/0:16,0:16:45.15:0,45,814	0/0:23,0:23:66.23:0,66,1204	0/0:17,0:17:51.13:0,51,880	0/0:13,0:13:33.11:0,33,600	0/0:15,0:15:36.12:0,36,618	0/0:23,0:23:60.19:0,60,1064	0/0:16,0:16:45.13:0,45,776	0/0:15,0:15:45.15:0,45,783	0/0:25,0:25:69.10:0,69,1176	0/0:36,0:35:99:0,105,1841	1/1:19,0:18:30.57:322,31,0	0/1:25,0:25:25.22:362,0,25	1/1:14,0:14:20.22:269,20,0	0/0:19,0:19:54.03:0,54,959	0/0:26,0:26:69.21:0,69,1155	0/0:18,0:18:48.14:0,48,773	0/0:28,0:28:78.27:0,78,1393	0/0:28,0:28:75.25:0,75,1341	0/0:29,0:28:75.25:0,75,1305	0/0:22,0:22:54.16:0,54,898
chr10	15558500	.	A	AGTGT	2475.79	PASS	AB=0.864;AC=35;AF=0.673;AN=52;BaseQRankSum=-0.886;DP=672;FS=5.057;HRun=0;HaplotypeScore=109.8280;InbreedingCoeff=0.2518;MQ=63.30;MQ0=15;MQRankSum=-0.616;QD=5.14;ReadPosRankSum=-0.342;VQSLOD=1.4501;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:18,14:32:34.22:140,0,34	0/0:12,0:12:2.06:0,2,161	./.	./.	0/0:11,0:11:0:0,0,1	1/1:24,0:24:3.01:50,3,0	1/1:30,0:26:6.02:107,6,0	0/0:28,0:24:2.90:0,3,20	0/1:16,0:19:21.11:21,0,156	0/1:16,0:16:15.37:15,0,164	1/1:11,0:11:1.25:3,1,0	1/1:10,9:24:17.53:306,18,0	1/1:16,0:16:0.59:105,1,0	0/1:11,13:29:40.13:71,0,40	1/1:18,9:28:5.75:83,6,0	1/1:10,6:16:11.51:165,12,0	0/0:27,0:32:16.54:0,17,393	1/1:16,5:20:6.23:83,6,0	1/1:15,0:13:9.01:108,9,0	1/1:12,0:12:6.49:90,6,0	1/1:63,0:58:5.61:85,6,0	1/1:16,0:16:11.99:142,12,0	1/1:8,12:21:9.03:211,9,0	1/1:21,16:38:29.57:588,30,0	1/1:17,1:19:12.04:244,12,0	0/0:23,0:23:11.51:0,12,184	0/0:14,0:14:6:0,6,70	0/1:21,0:21:13.72:14,0,322
chr10	15558537	.	G	GTGTGTA	1298.94	PASS	AB=0.925;AC=19;AF=0.339;AN=56;BaseQRankSum=5.224;DP=636;FS=8.000;HRun=0;HaplotypeScore=119.8313;InbreedingCoeff=0.1937;MQ=55.61;MQ0=15;MQRankSum=0.149;QD=3.84;ReadPosRankSum=1.138;VQSLOD=1.1203;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:6.27:0,6,353	0/0:11,0:11:23.61:0,24,324	0/0:29,0:17:50.81:0,51,480	0/0:30,0:17:43.98:0,44,457	0/1:2,13:19:0:0,0,0	1/1:8,18:28:9.03:254,9,0	1/1:7,12:22:6.02:151,6,0	0/0:19,0:14:34.18:0,34,290	0/0:18,0:18:28.58:0,29,357	0/0:25,0:25:69.64:0,70,695	0/0:16,0:15:29.30:0,29,223	0/1:26,0:26:68.53:69,0,103	0/1:19,0:19:2.09:2,0,229	0/1:26,0:25:3.86:4,0,164	0/0:26,0:26:10.83:0,11,234	0/1:19,0:19:20.85:21,0,139	0/0:31,0:31:73.35:0,73,924	0/1:17,0:17:0.21:0,0,128	1/1:18,0:13:32.55:319,33,0	1/1:3,0:13:11.90:157,12,0	0/1:20,0:38:32.96:80,0,33	0/1:15,0:14:10.94:11,0,62	0/1:20,0:20:31.93:60,0,32	0/1:31,0:29:58.87:159,0,59	0/1:20,0:19:99:178,0,111	0/0:26,0:26:45.37:0,45,462	0/0:7,0:7:17.59:0,18,198	0/0:19,0:18:39.04:0,39,553
chr10	15561361	.	TGCAGGTACGG	T	479.37	PASS	AB=0.695;AC=2;AF=0.036;AN=56;BaseQRankSum=5.004;DP=824;FS=0.000;HRun=0;HaplotypeScore=188.2794;InbreedingCoeff=-0.0384;MQ=44.88;MQ0=7;MQRankSum=-4.462;QD=9.59;ReadPosRankSum=-2.667;VQSLOD=2.2923;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:96.33:0,96,5176	0/0:7,0:7:18.06:0,18,946	0/0:22,0:9:27.09:0,27,1137	0/0:26,0:11:33.11:0,33,1597	0/1:14,10:20:99:200,0,1883	0/0:16,7:18:42.14:0,42,2293	0/0:51,5:54:99:0,132,7112	0/0:31,0:31:90.31:0,90,4569	0/0:33,0:33:56.94:0,57,3027	0/0:18,0:16:48.16:0,48,2447	0/0:7,0:7:18.06:0,18,988	0/0:32,0:32:72.25:0,72,3915	0/0:36,0:36:69.24:0,69,3731	0/0:42,0:42:87.30:0,87,4605	0/0:36,0:36:84.29:0,84,4347	0/0:26,0:26:60.21:0,60,3288	0/0:30,0:30:75.26:0,75,3968	0/0:21,0:21:51.18:0,51,2697	0/0:19,6:23:14.23:0,14,2912	0/1:14,12:19:99:368,0,1937	0/0:79,10:86:99:0,205,10731	0/0:19,0:18:39.13:0,39,2130	0/0:14,0:14:36.12:0,36,1973	0/0:37,0:37:87.30:0,87,4614	0/0:21,0:19:42.14:0,42,2290	0/0:32,0:31:93.32:0,93,4941	0/0:33,0:33:62.99:0,63,3229	0/0:11,0:9:27.09:0,27,1481
chr10	15561862	.	TTC	T	562.71	PASS	AB=0.977;AC=17;AF=0.370;AN=46;BaseQRankSum=-4.530;DP=306;FS=1.845;HRun=0;HaplotypeScore=66.8067;InbreedingCoeff=-0.4158;MQ=67.63;MQ0=13;MQRankSum=-0.124;QD=3.23;ReadPosRankSum=-5.418;VQSLOD=0.2434;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:32:1.49:0,1,246	0/1:3,0:3:3.24:3,0,18	0/0:34,0:18:34.55:0,35,325	0/0:28,0:10:13.35:0,13,137	./.	./.	./.	0/1:20,2:20:34.53:152,0,35	0/1:7,2:8:41.43:41,0,65	0/1:10,1:10:57.01:60,0,57	0/1:10,0:9:14.49:14,0,57	0/1:12,0:12:10.90:122,0,11	0/0:5,0:4:3.54:0,4,22	0/1:10,0:10:27.45:30,0,27	0/1:7,0:7:18.46:18,0,32	0/1:6,0:6:13.46:64,0,13	0/1:27,0:26:23.76:24,0,162	0/0:15,0:14:14.77:0,15,104	1/1:3,0:2:2.98:22,3,0	./.	./.	0/1:4,0:4:2.61:3,0,25	0/1:6,0:5:1.47:1,0,35	0/1:14,0:13:19.54:20,0,93	0/0:11,0:11:12.10:0,12,101	0/1:21,0:17:41.73:100,0,42	0/1:9,0:8:21.65:22,0,40	0/0:5,0:5:7.90:0,8,40
chr10	15562272	.	GTTC	G	235.49	PASS	AB=1.000;AC=5;AF=0.100;AN=50;BaseQRankSum=4.514;DP=454;FS=3.637;HRun=0;HaplotypeScore=77.4777;InbreedingCoeff=0.8428;MQ=61.39;MQ0=1;MQRankSum=-4.343;QD=16.82;ReadPosRankSum=-2.026;VQSLOD=2.5928;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,126,2706	0/0:3,0:3:9.03:0,9,181	0/0:17,0:11:26.67:0,27,488	0/0:26,0:14:33.07:0,33,639	1/1:0,6:3:6.02:97,6,0	./.	./.	0/0:21,0:20:60.20:0,60,1263	0/0:18,0:17:48.15:0,48,1028	0/0:19,0:19:57.18:0,57,1197	0/0:15,0:15:39.11:0,39,769	0/0:26,0:26:75.22:0,75,1534	0/0:19,0:19:57.20:0,57,1255	0/0:20,0:20:57.20:0,57,1216	0/0:17,0:17:51.16:0,51,1070	0/0:20,0:20:60.21:0,60,1305	0/0:25,0:23:66.23:0,66,1433	0/0:26,0:25:72.20:0,72,1543	0/1:3,0:3:0:0,0,0	1/1:0,5:5:15.05:244,15,0	./.	0/0:8,0:8:18.06:0,18,384	0/0:11,0:11:33.11:0,33,735	0/0:31,0:30:84.18:0,84,1715	0/0:16,0:16:48.12:0,48,923	0/0:20,0:20:57.19:0,57,1203	0/0:22,0:22:54.19:0,54,1204	0/0:11,0:11:30.10:0,30,670
chr10	15562314	.	TTCCTCC	T	685.51	PASS	AB=0.556;AC=9;AF=0.167;AN=54;BaseQRankSum=6.329;DP=445;FS=11.554;HRun=0;HaplotypeScore=118.5647;InbreedingCoeff=0.6905;MQ=66.64;MQ0=9;MQRankSum=-5.508;QD=38.08;ReadPosRankSum=0.732;VQSLOD=3.0200;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:83.42:0,83,2316	0/0:6,0:6:13.29:0,13,444	0/0:21,0:13:21.88:0,22,594	0/0:29,0:17:34.54:0,35,751	0/1:2,8:8:26.51:300,0,27	1/1:0,1:1:3.01:70,3,0	1/1:0,1:1:3.01:70,3,0	0/0:21,0:19:54.18:0,54,1503	0/0:15,0:14:42.14:0,42,1430	0/0:27,0:27:81.26:0,81,2648	0/0:15,0:15:45.15:0,45,1610	0/0:18,0:18:52.06:0,52,1714	0/0:25,0:25:72.17:0,72,1784	0/0:15,0:15:45.15:0,45,1288	0/0:16,0:16:48.15:0,48,1375	0/0:17,0:17:51.18:0,51,1648	0/0:25,0:24:69.17:0,69,2220	0/0:23,0:21:32.37:0,32,1537	./.	1/1:0,5:5:15.05:341,15,0	1/1:0,1:1:3.01:39,3,0	0/0:5,0:5:15.05:0,15,497	0/0:13,0:12:18.76:0,19,788	0/0:18,0:18:49.98:0,50,1485	0/0:16,0:14:42.12:0,42,1041	0/0:30,0:30:90.27:0,90,3119	0/0:24,0:24:72.25:0,72,2518	0/0:18,0:18:54.18:0,54,1805
chr10	15562320	.	CCTTT	C	2186.13	PASS	AB=1.000;AC=25;AF=0.543;AN=46;BaseQRankSum=2.520;DP=441;FS=3.867;HRun=0;HaplotypeScore=95.4771;InbreedingCoeff=0.6549;MQ=66.67;MQ0=11;MQRankSum=-3.327;QD=9.94;ReadPosRankSum=1.964;VQSLOD=2.3708;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:22,4:26:15.05:234,15,0	0/0:7,0:7:12.51:0,13,250	./.	0/1:26,0:15:0:0,0,0	0/1:10,0:8:9.75:20,0,10	0/1:1,0:1:0:0,0,0	./.	./.	0/0:17,0:16:15.05:0,15,319	0/0:25,0:25:42.06:0,42,829	0/0:16,0:16:24.08:0,24,499	1/1:16,0:16:9.02:100,9,0	1/1:15,7:22:36.11:522,36,0	1/1:14,2:16:24.07:339,24,0	1/1:11,3:14:18.04:236,18,0	1/1:14,2:16:12.04:182,12,0	0/0:27,0:26:42.14:0,42,807	1/1:20,0:18:13.51:103,14,0	./.	./.	1/1:1,0:1:2.99:23,3,0	1/1:5,1:6:6.02:91,6,0	0/1:13,0:12:4.58:58,0,5	0/1:16,0:16:4.65:56,0,5	1/1:10,7:15:27.08:394,27,0	0/0:30,0:30:48.16:0,48,1049	0/0:28,0:28:45.11:0,45,941	0/0:19,0:19:24.08:0,24,555
chr10	15562364	.	TC	T	348.32	PASS	AB=0.789;AC=5;AF=0.096;AN=52;BaseQRankSum=3.681;DP=438;FS=0.765;HRun=1;HaplotypeScore=104.9290;InbreedingCoeff=0.1560;MQ=53.69;MQ0=9;MQRankSum=-1.368;QD=6.11;ReadPosRankSum=-2.746;VQSLOD=-0.5638;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:51.10:0,51,519	0/0:7,0:7:19.31:0,19,270	0/0:11,0:2:1.25:0,1,4	0/0:10,0:3:2.65:0,3,32	0/0:27,0:24:14.25:0,14,481	0/0:6,0:6:13.26:0,13,181	./.	0/0:32,0:28:81.14:0,81,1000	0/0:18,0:18:51.10:0,51,651	0/0:21,0:21:63.21:0,63,946	0/0:17,0:16:48.15:0,48,687	0/0:14,1:15:22.05:0,22,401	0/0:21,0:21:31:0,31,270	0/0:13,0:13:16.26:0,16,132	0/0:14,0:14:22.52:0,23,215	0/0:11,0:11:22.12:0,22,260	0/0:25,0:25:69.23:0,69,1005	0/1:14,5:18:99:198,0,332	./.	0/0:11,0:9:27.02:0,27,351	1/1:1,0:1:2.04:6,2,0	0/0:4,0:4:8.14:0,8,71	0/1:14,5:18:99:99,0,371	0/1:13,5:18:99:148,0,318	0/0:21,0:18:30.51:0,31,347	0/0:30,0:30:90.28:0,90,1289	0/0:26,0:26:75.22:0,75,1050	0/0:14,0:14:42.14:0,42,622
chr10	15562376	.	CT	C	5743.20	PASS	AC=48;AF=0.889;AN=54;BaseQRankSum=-3.339;DP=493;FS=1.912;HRun=13;HaplotypeScore=90.4063;InbreedingCoeff=0.7054;MQ=64.24;MQ0=12;MQRankSum=-0.890;QD=13.11;ReadPosRankSum=5.092;VQSLOD=5.1131;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,21:25:23.07:323,23,0	1/1:2,7:9:11.85:87,12,0	0/0:31,0:10:20.67:0,21,139	0/0:20,0:11:3.94:0,4,77	1/1:7,21:25:39.23:357,39,0	1/1:0,5:5:14.91:109,15,0	./.	1/1:11,18:27:44.67:328,45,0	1/1:1,15:16:35.79:263,36,0	1/1:3,16:19:44.66:328,45,0	1/1:6,15:21:15.44:211,15,0	1/1:5,11:16:43.43:303,43,0	1/1:3,21:24:41.28:306,41,0	1/1:5,9:14:37.91:272,38,0	1/1:6,6:13:8.31:122,8,0	1/1:2,8:10:20.87:153,21,0	1/1:4,25:29:39.37:452,39,0	1/1:7,16:23:20.91:209,21,0	1/1:3,0:3:4.07:12,4,0	1/1:4,0:12:22.40:64,22,0	0/0:1,0:1:0:0,0,0	1/1:1,2:3:5.96:44,6,0	1/1:7,13:19:32.80:240,33,0	1/1:8,9:17:11.73:179,12,0	1/1:4,18:19:12.58:255,13,0	1/1:7,23:31:70.13:494,70,0	1/1:7,15:24:41.75:347,42,0	1/1:1,14:15:38.77:285,39,0
chr10	15562414	.	GT	G	1080.68	PASS	AC=10;AF=0.185;AN=54;BaseQRankSum=8.889;DP=482;FS=18.390;HRun=2;HaplotypeScore=84.7638;InbreedingCoeff=0.9344;MQ=69.72;MQ0=5;MQRankSum=-7.666;QD=17.72;ReadPosRankSum=1.039;VQSLOD=2.5212;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:69.23:0,69,1029	0/0:12,0:12:36.08:0,36,514	0/0:17,0:15:25.38:0,25,416	0/0:24,0:21:31.54:0,32,434	1/1:1,25:18:45.15:583,45,0	1/1:1,4:5:12.04:152,12,0	./.	0/0:21,0:20:60.19:0,60,861	0/0:18,0:18:48.14:0,48,681	0/0:22,0:22:63.15:0,63,867	0/0:19,0:19:54.18:0,54,809	0/0:17,0:17:51.17:0,51,764	0/0:24,0:24:53.94:0,54,774	0/0:15,0:15:45.15:0,45,673	0/0:16,0:16:48.15:0,48,694	0/0:17,0:17:45.15:0,45,675	0/0:21,0:21:57.15:0,57,829	0/0:22,0:22:45.11:0,45,649	1/1:1,11:3:9.03:117,9,0	1/1:1,16:10:27.09:350,27,0	1/1:0,1:1:3.01:39,3,0	0/0:12,0:12:36.12:0,36,540	0/0:16,0:15:36.08:0,36,514	0/0:20,0:20:54.14:0,54,784	0/0:20,0:20:51.17:0,51,764	0/0:27,0:26:75.25:0,75,1119	0/0:19,0:19:57.19:0,57,853	0/0:10,0:10:24.08:0,24,360
chr10	15564215	.	T	TC	5020.91	PASS	AC=12;AF=0.222;AN=54;BaseQRankSum=14.711;DP=750;FS=6.760;HRun=2;HaplotypeScore=77.6219;InbreedingCoeff=0.9220;MQ=53.86;MQ0=38;MQRankSum=0.706;QD=29.36;ReadPosRankSum=-1.582;VQSLOD=3.5517;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:69,0:68:99:0,196,2363	0/0:11,0:11:30.09:0,30,371	0/0:31,0:1:2.50:0,2,9	./.	1/1:5,19:23:57.19:813,57,0	1/1:2,18:19:45.15:647,45,0	1/1:4,25:28:63.21:906,63,0	0/0:38,0:36:99:0,99,1217	0/0:26,0:24:57.18:0,57,706	0/0:31,0:28:78.24:0,78,967	0/0:15,0:15:45.12:0,45,543	0/0:13,0:13:24.07:0,24,298	0/0:13,0:13:39.11:0,39,471	0/0:19,0:19:48.15:0,48,595	0/0:22,0:22:51.15:0,51,620	0/0:20,0:20:51.15:0,51,619	0/0:56,0:54:99:0,144,1760	0/0:23,0:23:66.19:0,66,803	1/1:4,14:15:1.93:481,2,0	1/1:1,21:21:54.14:747,54,0	1/1:13,45:55:99:1426,99,0	0/0:18,0:18:48.15:0,48,594	0/0:16,0:16:42.12:0,42,508	0/0:52,0:52:99:0,117,1433	0/0:18,0:18:48.15:0,48,595	0/0:31,0:30:90.28:0,90,1116	0/0:22,0:20:57.18:0,57,706	0/0:13,0:13:27.08:0,27,335
chr10	15564624	.	C	CTGTGTGTGTGTG	1555.78	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=2.980;DP=714;FS=12.770;HRun=0;HaplotypeScore=232.7491;InbreedingCoeff=0.8200;MQ=61.21;MQ0=2;MQRankSum=-3.447;QD=9.66;ReadPosRankSum=-1.404;VQSLOD=1.1225;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,99,3208	0/0:7,0:8:18.06:0,18,563	0/1:50,0:31:5.56:6,0,433	0/0:38,0:32:46.71:0,47,1027	1/1:14,11:26:6.02:353,6,0	1/1:18,0:18:6:73,6,0	1/1:6,8:15:3.01:177,3,0	0/0:42,0:45:48.27:0,48,1551	0/0:26,0:27:69.20:0,69,2127	0/0:24,0:24:43.42:0,43,1246	0/0:21,0:22:51.14:0,51,1605	0/0:17,0:19:36.11:0,36,1025	0/0:22,0:22:48.14:0,48,1254	0/0:19,0:19:33.11:0,33,1043	0/0:43,0:42:90.25:0,90,2769	0/0:24,0:25:60.17:0,60,1878	0/0:37,0:40:60.24:0,60,2396	0/0:26,0:26:66.16:0,66,2098	1/1:15,0:15:18.06:659,18,0	1/1:12,0:12:9.02:182,9,0	1/1:23,0:22:15.46:274,15,0	0/0:22,0:22:51.18:0,51,1756	0/0:13,0:13:36.08:0,36,1041	0/0:23,0:26:57.20:0,57,1855	0/0:14,0:16:36.09:0,36,1075	0/0:32,0:32:75.23:0,75,2305	0/0:28,0:28:60.19:0,60,1848	0/0:11,0:11:33.10:0,33,1022
chr10	15565045	.	CTA	C	407.59	PASS	AC=8;AF=0.160;AN=50;BaseQRankSum=4.593;DP=563;FS=3.853;HRun=0;HaplotypeScore=66.2943;InbreedingCoeff=0.8457;MQ=38.19;MQ0=126;MQRankSum=-4.074;QD=8.15;ReadPosRankSum=1.078;VQSLOD=2.8422;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:47:84.25:0,84,1426	0/0:7,0:5:9.03:0,9,158	./.	./.	1/1:1,14:12:9.03:117,9,0	1/1:2,11:3:9.03:123,9,0	1/1:5,8:4:9.03:118,9,0	0/0:29,0:19:48.05:0,48,725	0/0:18,0:16:21.07:0,21,350	0/0:30,0:24:69.19:0,69,1093	0/0:28,0:27:39.12:0,39,660	0/0:19,0:13:24.05:0,24,396	0/0:9,0:8:6.02:0,6,106	0/0:30,0:25:48.12:0,48,788	0/0:18,0:13:24.08:0,24,425	0/0:31,0:18:30.09:0,30,503	0/0:36,0:32:57.16:0,57,935	0/0:16,0:16:30.08:0,30,493	0/0:11,0:2:3:0,3,26	1/1:9,0:6:15.05:189,15,0	./.	0/0:21,0:20:36.04:0,36,550	0/0:17,0:16:27.09:0,27,478	0/0:23,0:20:36.10:0,36,599	0/0:18,0:17:27.08:0,27,450	0/0:25,0:22:60.11:0,60,905	0/0:18,0:11:15.51:0,16,238	0/0:9,0:8:18.06:0,18,317
chr10	15566370	.	GTAACC	G	5819.26	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=13.044;DP=613;FS=5.281;HRun=0;HaplotypeScore=115.2478;InbreedingCoeff=0.9878;MQ=79.62;MQ0=0;MQRankSum=-7.161;QD=48.49;ReadPosRankSum=1.129;VQSLOD=4.9848;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,111,3587	0/0:3,0:3:9.03:0,9,290	0/0:21,0:21:63.20:0,63,1881	0/0:25,0:25:69.23:0,69,1850	1/1:1,16:17:36.12:802,36,0	1/1:0,23:22:57.20:1271,57,0	1/1:1,23:22:57.20:1269,57,0	0/0:39,0:39:99:0,114,3626	0/0:23,0:23:66.21:0,66,2060	0/0:16,0:16:48.16:0,48,1503	0/0:26,0:26:78.27:0,78,2506	0/0:25,0:25:75.24:0,75,2352	0/0:22,0:22:66.19:0,66,1943	0/0:21,0:21:63.22:0,63,2033	0/0:25,0:25:75.24:0,75,2348	0/0:14,0:14:42.14:0,42,1359	0/0:33,0:32:96.33:0,96,3097	0/0:25,0:25:69.24:0,69,2225	1/1:0,16:14:42.12:874,42,0	1/1:4,10:14:24.08:535,24,0	1/1:2,24:25:47.29:1069,47,0	0/0:14,0:14:42.14:0,42,1356	0/0:18,0:18:51.17:0,51,1598	0/0:17,0:17:51.18:0,51,1602	0/0:14,0:14:42.14:0,42,1322	0/0:30,0:30:90.31:0,90,2857	0/0:21,0:21:63.20:0,63,1959	0/0:23,0:23:54.19:0,54,1745
chr10	15567387	.	CA	C	3202.15	PASS	AB=0.689;AC=44;AF=0.786;AN=56;BaseQRankSum=-5.182;DP=426;FS=6.189;HRun=14;HaplotypeScore=55.7535;InbreedingCoeff=0.3627;MQ=45.41;MQ0=32;MQRankSum=3.928;QD=8.27;ReadPosRankSum=1.323;VQSLOD=2.5038;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:18,20:40:12.26:295,12,0	0/1:5,3:8:18.42:32,0,18	1/1:6,1:2:2.97:21,3,0	0/1:13,0:7:13.07:13,0,48	0/0:16,1:9:11.76:0,12,47	0/0:13,1:9:19.21:0,19,83	0/0:8,0:6:12.22:0,12,51	1/1:9,13:20:39.65:254,40,0	0/1:2,8:8:3.27:102,0,3	1/1:5,8:12:20.72:144,21,0	1/1:8,10:16:31.78:211,32,0	1/1:7,5:12:17.43:113,17,0	1/1:3,4:7:11.89:82,12,0	1/1:2,9:11:17.85:123,18,0	1/1:6,7:13:18.92:114,19,0	1/1:6,7:10:25.58:162,26,0	0/1:10,19:30:4.27:322,0,4	1/1:10,11:17:23.67:161,24,0	1/1:7,10:12:26.68:184,27,0	1/1:4,11:9:17.76:123,18,0	1/1:2,3:4:8.90:61,9,0	1/1:3,9:13:16.82:109,17,0	1/1:3,6:12:17.94:100,18,0	1/1:8,7:13:17.71:123,18,0	0/1:8,9:15:4.08:120,0,4	0/1:5,9:14:22.95:152,0,23	1/1:8,7:14:14.96:79,15,0	1/1:2,8:9:23.81:164,24,0
chr10	15567392	.	A	AT	392.91	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=8.819;DP=440;FS=2.246;HRun=0;HaplotypeScore=76.3009;InbreedingCoeff=0.8320;MQ=52.35;MQ0=21;MQRankSum=-2.033;QD=5.31;ReadPosRankSum=2.961;VQSLOD=3.1316;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:44:99:0,110,862	0/0:7,0:7:17.33:0,17,141	0/0:14,0:5:11.76:0,12,82	0/0:17,0:11:1.17:0,1,136	1/1:7,7:9:4.69:90,5,0	1/1:4,9:9:18.07:146,18,0	1/1:4,4:7:5.24:106,5,0	0/0:24,0:22:62.85:0,63,510	0/0:11,0:9:26.93:0,27,229	0/0:16,0:15:43.09:0,43,339	0/0:15,0:13:32.95:0,33,269	0/0:12,0:12:32.81:0,33,247	0/0:8,0:8:23.93:0,24,193	0/0:10,0:10:17.97:0,18,147	0/0:15,0:14:35.86:0,36,281	0/0:13,0:11:29.92:0,30,239	0/0:36,0:33:89.76:0,90,745	0/0:21,0:18:44.84:0,45,354	1/1:16,0:12:29.41:140,29,0	1/1:16,0:10:3.47:50,3,0	1/1:7,0:6:6.44:23,6,0	0/0:13,0:13:32.80:0,33,248	0/0:13,0:12:32.78:0,33,244	0/0:15,0:13:29.86:0,30,232	0/0:16,0:14:35.89:0,36,300	0/0:16,0:16:44.87:0,45,391	0/0:18,0:15:29.87:0,30,229	0/0:11,0:10:26.97:0,27,223
chr10	15567398	.	A	AT	720.54	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=7.980;DP=441;FS=0.000;HRun=0;HaplotypeScore=74.2582;InbreedingCoeff=0.9187;MQ=57.26;MQ0=9;MQRankSum=-2.676;QD=9.36;ReadPosRankSum=1.391;VQSLOD=3.7208;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:45:99:0,110,793	0/0:7,0:7:17.90:0,18,148	0/0:16,0:7:17.43:0,17,121	0/0:18,0:12:24.31:0,24,184	1/1:9,6:12:22.98:211,23,0	1/1:5,9:10:29.93:236,30,0	1/1:3,4:6:0.94:91,1,0	0/0:25,0:23:62.57:0,63,473	0/0:12,0:10:29.78:0,30,228	0/0:16,0:16:45.66:0,46,349	0/0:15,0:14:41.69:0,42,305	0/0:10,0:10:23.75:0,24,161	0/0:8,0:8:20.89:0,21,162	0/0:9,0:9:17.83:0,18,122	0/0:16,0:16:38.68:0,39,285	0/0:12,0:11:32.62:0,33,224	0/0:35,0:33:86.19:0,86,629	0/0:18,0:18:41.74:0,42,310	1/1:17,0:13:33.85:196,34,0	1/1:17,0:12:11.60:96,12,0	1/1:6,0:5:13.30:65,13,0	0/0:15,0:15:35.63:0,36,254	0/0:14,0:13:35.58:0,36,239	0/0:17,0:15:32.77:0,33,241	0/0:13,0:12:32.77:0,33,252	0/0:15,0:15:44.79:0,45,376	0/0:17,0:15:8.86:0,9,179	0/0:10,0:10:26.79:0,27,190
chr10	15568211	.	A	AC	1704.33	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=10.450;DP=551;FS=8.425;HRun=2;HaplotypeScore=69.9700;InbreedingCoeff=0.9892;MQ=69.47;MQ0=10;MQRankSum=-7.823;QD=14.69;ReadPosRankSum=-3.686;VQSLOD=1.4726;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,153,1947	0/0:10,0:10:27.09:0,27,350	0/0:10,0:10:24.06:0,24,295	0/0:23,0:23:41.71:0,42,619	1/1:1,13:13:12.92:163,13,0	1/1:0,24:15:21.85:313,22,0	1/1:2,22:17:36.54:441,37,0	0/0:25,0:25:72.20:0,72,905	0/0:18,0:18:54.18:0,54,701	0/0:14,0:14:39.12:0,39,496	0/0:7,0:7:18.06:0,18,223	0/0:15,0:15:45.15:0,45,584	0/0:22,0:22:63.20:0,63,817	0/0:22,0:22:66.21:0,66,856	0/0:26,0:26:75.23:0,75,959	0/0:11,0:11:33.11:0,33,429	0/0:27,0:27:78.25:0,78,1012	0/0:28,0:28:84.27:0,84,1090	1/1:4,8:9:24.01:254,24,0	1/1:2,8:10:18.06:231,18,0	1/1:7,25:28:34.40:489,34,0	0/0:15,0:15:36.09:0,36,446	0/0:11,0:11:27.04:0,27,331	0/0:25,0:25:75.24:0,75,972	0/0:14,0:14:39.13:0,39,502	0/0:24,0:24:60.19:0,60,777	0/0:25,0:24:69.22:0,69,896	0/0:9,0:9:27.09:0,27,350
chr10	15568543	.	GCC	G	4584.53	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=14.610;DP=518;FS=7.404;HRun=5;HaplotypeScore=75.5514;InbreedingCoeff=0.9771;MQ=56.68;MQ0=13;MQRankSum=-1.094;QD=31.62;ReadPosRankSum=-1.660;VQSLOD=3.8780;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,102,1824	0/0:6,0:6:15.04:0,15,235	0/0:12,0:5:15.02:0,15,243	0/0:15,0:6:15.05:0,15,275	1/1:0,18:18:30.10:420,30,0	1/1:0,13:13:36.12:504,36,0	1/1:1,35:36:93.30:1294,93,0	0/0:21,0:18:54.18:0,54,932	0/0:12,0:12:36.12:0,36,660	0/0:14,0:14:42.14:0,42,759	0/0:8,0:8:24.08:0,24,419	0/0:23,0:23:66.23:0,66,1207	0/0:15,0:15:42.14:0,42,762	0/0:20,0:20:54.19:0,54,989	0/0:19,0:19:57.20:0,57,1045	0/0:11,0:11:33.10:0,33,575	0/0:35,0:35:96.30:0,96,1726	0/0:35,0:35:99:0,99,1806	1/1:6,11:16:36.10:503,36,0	1/1:3,12:15:39.13:538,39,0	1/1:8,38:46:96.29:1326,96,0	0/0:13,0:12:36.12:0,36,648	0/0:4,0:4:9.03:0,9,165	0/0:21,0:21:60.17:0,60,1039	0/0:17,0:17:51.16:0,51,905	0/0:18,0:17:51.17:0,51,917	0/0:8,0:8:21.07:0,21,380	0/0:10,0:10:27.08:0,27,466
chr10	15568620	.	GA	G	1871.03	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.377;DP=527;FS=3.485;HRun=1;HaplotypeScore=55.6880;InbreedingCoeff=0.9984;MQ=64.09;MQ0=3;MQRankSum=-2.973;QD=34.65;ReadPosRankSum=-0.832;VQSLOD=3.1233;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:90.29:0,90,1413	0/0:11,0:11:33.11:0,33,525	0/0:27,0:22:66.17:0,66,1000	0/0:17,0:16:45.62:0,46,687	0/0:19,0:17:51.17:0,51,814	0/0:14,0:14:39.13:0,39,622	0/0:30,0:28:84.20:0,84,1283	0/0:26,0:26:78.26:0,78,1224	0/0:20,0:20:60.20:0,60,959	0/0:24,0:24:72.25:0,72,1151	0/0:8,0:8:24.08:0,24,381	0/0:18,0:18:54.18:0,54,859	0/0:17,0:17:51.17:0,51,815	0/0:18,0:18:54.17:0,54,838	0/0:22,0:22:66.19:0,66,1007	0/0:10,0:10:30.09:0,30,458	0/0:30,0:30:90.31:0,90,1431	0/0:24,0:24:72.23:0,72,1127	1/1:0,18:16:42.14:578,42,0	1/1:0,11:10:30.10:418,30,0	1/1:1,24:25:75.23:1017,75,0	0/0:10,0:10:30.10:0,30,479	0/0:11,0:11:30.09:0,30,457	0/0:24,0:24:72.20:0,72,1123	0/0:15,0:15:45.15:0,45,719	0/0:19,0:19:57.19:0,57,912	0/0:12,0:12:36.12:0,36,575	0/0:17,0:17:51.16:0,51,791
chr10	15568755	.	ACTGT	A	3580.55	PASS	AB=0.682;AC=11;AF=0.196;AN=56;BaseQRankSum=13.010;DP=502;FS=3.700;HRun=0;HaplotypeScore=117.5404;InbreedingCoeff=0.8839;MQ=61.41;MQ0=1;MQRankSum=-12.827;QD=36.17;ReadPosRankSum=0.176;VQSLOD=3.4884;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,105,2588	0/0:6,0:6:18.06:0,18,486	0/0:10,0:9:24.08:0,24,584	0/0:15,0:14:39.04:0,39,876	1/1:1,19:20:39.13:697,39,0	1/1:3,16:19:45.15:834,45,0	1/1:3,12:13:30.10:527,30,0	0/0:33,0:33:93.32:0,93,2409	0/0:19,0:19:57.20:0,57,1503	0/0:13,0:13:36.12:0,36,895	0/0:18,0:18:54.19:0,54,1450	0/0:16,0:16:48.15:0,48,1239	0/0:18,0:18:54.17:0,54,1400	0/0:20,0:20:60.19:0,60,1563	0/0:16,0:16:48.16:0,48,1286	0/0:20,0:20:54.19:0,54,1423	0/0:24,0:23:69.24:0,69,1862	0/0:19,0:19:57.15:0,57,1436	0/1:8,7:11:59.95:320,0,60	1/1:1,18:16:45.15:832,45,0	1/1:1,10:11:24.08:370,24,0	0/0:9,0:9:27.09:0,27,692	0/0:19,0:19:57.20:0,57,1501	0/0:21,0:21:63.22:0,63,1663	0/0:25,0:25:75.26:0,75,1955	0/0:19,0:19:54.19:0,54,1399	0/0:18,0:18:51.18:0,51,1377	0/0:10,0:10:30.10:0,30,810
chr10	15569275	.	C	CAAAAA	930.70	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=3.333;DP=407;FS=23.765;HRun=0;HaplotypeScore=73.6361;InbreedingCoeff=0.8509;MQ=47.71;MQ0=30;MQRankSum=-3.535;QD=18.99;ReadPosRankSum=-3.790;VQSLOD=0.7595;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:35:90.25:0,90,1737	0/0:6,0:5:12.04:0,12,154	0/0:13,0:2:6.02:0,6,133	0/0:9,0:1:3:0,3,28	1/1:2,2:8:17.98:281,18,0	1/1:3,1:6:9.82:199,10,0	1/1:4,2:5:11.99:212,12,0	0/0:22,0:18:54.19:0,54,1219	0/0:16,0:15:38.69:0,39,804	0/0:16,0:16:47.98:0,48,850	0/0:22,0:21:42.14:0,42,907	0/0:11,0:9:21.06:0,21,368	0/0:13,0:11:27.07:0,27,485	0/0:12,0:12:27.09:0,27,501	0/0:18,0:16:41.66:0,42,746	0/0:13,0:13:36.11:0,36,677	0/0:24,0:24:66.13:0,66,1335	0/0:16,0:15:33.11:0,33,676	1/1:2,0:5:7.57:76,8,0	1/1:3,1:13:18.42:252,18,0	1/1:2,3:6:3.01:80,3,0	0/0:4,0:4:9.03:0,9,167	0/0:9,0:9:15.05:0,15,295	0/0:17,0:17:39.08:0,39,679	0/0:21,0:19:48.11:0,48,791	0/0:23,0:22:60.18:0,60,1213	0/0:15,0:15:42.14:0,42,867	0/0:19,0:18:51.17:0,51,1106
chr10	15569276	.	GA	G	1980.16	PASS	AB=0.757;AC=22;AF=0.407;AN=54;BaseQRankSum=1.216;DP=430;FS=14.868;HRun=12;HaplotypeScore=71.7757;InbreedingCoeff=0.7899;MQ=45.79;MQ0=34;MQRankSum=6.350;QD=10.76;ReadPosRankSum=5.513;VQSLOD=1.2923;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,29:35:74.63:580,75,0	0/0:6,0:5:5.97:0,6,50	0/1:11,1:2:17.24:17,0,19	./.	0/0:15,0:12:30.81:0,31,151	0/0:9,0:8:17.21:0,17,91	0/0:13,0:11:25.67:0,26,130	0/0:22,0:18:54.11:0,54,548	0/0:15,0:15:35.74:0,36,333	0/0:15,0:16:35.90:0,36,344	0/0:23,0:22:44.97:0,45,424	1/1:2,7:8:13.97:99,14,0	0/1:4,9:11:9.52:118,0,10	1/1:2,10:12:20.91:162,21,0	1/1:5,13:16:29.85:232,30,0	1/1:1,11:12:29.88:232,30,0	0/0:23,1:23:33.77:0,34,509	1/1:4,11:15:28.93:215,29,0	0/0:12,0:11:25.49:0,25,133	0/0:21,0:21:39.93:0,40,207	0/0:5,0:3:2.84:0,3,14	1/1:1,3:4:5.97:46,6,0	1/1:3,6:9:11.93:93,12,0	1/1:8,10:18:20.90:162,21,0	1/1:9,13:20:29.87:231,30,0	0/0:22,1:22:30.81:0,31,475	0/0:15,0:15:39.03:0,39,378	0/0:17,1:18:27.71:0,28,447
chr10	15569931	.	G	GTGTATGTATGTATGTA	31004.92	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=0.502;DP=699;FS=8.594;HRun=0;HaplotypeScore=315.7727;InbreedingCoeff=0.7349;MQ=54.66;MQ0=8;MQRankSum=-3.691;QD=47.48;ReadPosRankSum=4.199;VQSLOD=2.9614;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:30:18.06:638,18,0	1/1:10,0:10:6.02:112,6,0	0/0:27,0:21:18.01:0,18,293	0/0:19,0:16:14.16:0,14,244	1/1:27,0:26:23.15:698,23,0	1/1:31,0:31:39.05:1316,39,0	1/1:17,0:17:20.94:353,21,0	1/1:43,0:41:84.22:1938,84,0	1/1:9,17:26:27.09:1941,27,0	1/1:17,20:39:78.01:4157,78,0	1/1:3,8:13:15.05:946,15,0	1/1:24,0:24:33.05:906,33,0	1/1:24,0:24:36.11:1354,36,0	1/1:30,0:30:36.09:1227,36,0	1/1:34,0:33:39.08:1230,39,0	1/1:35,0:35:39.08:958,39,0	1/1:11,8:20:15.05:997,15,0	1/1:26,0:26:39.06:1398,39,0	1/1:24,0:23:26.98:604,27,0	1/1:13,0:13:9.03:294,9,0	1/1:13,0:13:3.01:97,3,0	1/1:19,0:17:15.05:725,15,0	1/1:19,0:37:21.07:858,21,0	1/1:9,0:8:2.99:24,3,0	1/1:16,0:16:12.04:335,12,0	1/1:13,22:38:84.07:4380,84,0	1/1:24,17:41:36.12:2165,36,0	1/1:8,1:10:18.06:1352,18,0
chr10	15569949	.	G	GTATGTATGTACA	9350.93	PASS	AB=1.000;AC=25;AF=0.463;AN=54;BaseQRankSum=6.841;DP=697;FS=9.556;HRun=0;HaplotypeScore=283.2296;InbreedingCoeff=-0.3290;MQ=51.17;MQ0=10;MQRankSum=-3.898;QD=17.54;ReadPosRankSum=6.748;VQSLOD=2.0442;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:33:63.43:63,0,334	0/0:8,0:8:5.08:0,5,33	0/0:30,0:19:39.10:0,39,859	0/0:19,0:16:14.79:0,15,569	0/1:27,0:26:29.75:267,0,30	0/1:35,0:35:21.95:638,0,22	0/1:24,0:24:23.30:537,0,23	0/0:52,0:49:25.07:0,25,1105	0/1:24,0:24:99:509,0,207	0/1:32,0:31:99:1323,0,426	0/1:17,0:17:99:361,0,221	0/1:21,0:21:26.43:169,0,26	0/1:23,0:23:32.65:148,0,33	0/0:30,0:30:15.75:0,16,188	0/1:32,0:31:99:253,0,160	0/1:39,0:39:99:224,0,303	0/1:19,0:18:70.22:199,0,70	0/1:23,0:24:90.54:91,0,198	1/1:8,10:23:51.16:1705,51,0	1/1:2,10:14:9.03:538,9,0	./.	0/1:21,0:19:41.06:41,0,129	1/1:24,0:24:11.85:140,12,0	0/0:9,0:8:5.98:0,6,68	0/1:15,0:15:81.69:82,0,123	0/1:37,0:36:99:1382,0,365	0/1:41,0:40:99:445,0,313	1/1:7,0:7:6.02:235,6,0
chr10	15569968	.	T	TG	1699.03	PASS	AB=0.819;AC=17;AF=0.304;AN=56;BaseQRankSum=9.596;DP=655;FS=6.838;HRun=0;HaplotypeScore=207.7030;InbreedingCoeff=-0.4485;MQ=53.55;MQ0=8;MQRankSum=-7.093;QD=3.93;ReadPosRankSum=1.485;VQSLOD=2.6382;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:22,8:31:39.51:40,0,508	0/1:10,0:10:23.70:24,0,248	0/0:27,0:19:57.13:0,57,739	0/0:18,0:12:27.56:0,28,375	0/1:27,2:28:55.07:55,0,407	0/1:27,8:35:99:128,0,604	0/1:18,5:23:67.23:67,0,554	0/1:48,0:47:55.76:56,0,1476	0/0:22,0:22:9.86:0,10,498	0/0:33,1:33:11.60:0,12,868	0/0:23,0:23:24.46:0,24,568	0/1:10,10:20:99:153,0,139	0/1:15,8:23:99:151,0,233	0/1:15,9:24:99:203,0,192	0/1:18,14:31:99:176,0,325	0/1:19,17:36:99:270,0,439	0/0:18,1:18:43.13:0,43,458	0/1:12,9:21:99:185,0,350	0/0:21,0:21:63.21:0,63,869	0/1:15,0:15:17.37:17,0,264	0/0:11,0:11:12.04:0,12,168	0/1:15,9:22:54.13:54,0,300	0/1:14,4:18:99:137,0,238	0/0:4,4:7:8.99:0,9,101	0/1:12,4:16:99:101,0,358	0/1:27,0:27:42.36:42,0,671	0/0:31,1:31:16.95:0,17,648	0/0:8,0:8:20.81:0,21,205
chr10	15570378	.	G	GGAAA	5618.10	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=-0.571;DP=639;FS=4.789;HRun=0;HaplotypeScore=101.3425;InbreedingCoeff=0.8994;MQ=59.59;MQ0=5;MQRankSum=2.645;QD=34.47;ReadPosRankSum=1.628;VQSLOD=4.7922;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:55.65:0,56,1180	0/0:8,0:8:15.05:0,15,243	0/0:18,0:13:23.96:0,24,318	0/1:20,0:16:13.38:13,0,163	1/1:6,19:28:57.11:1164,57,0	1/1:6,20:27:39.13:974,39,0	1/1:8,14:22:21.07:524,21,0	0/0:29,0:28:57.17:0,57,892	0/0:20,0:20:48.14:0,48,759	0/0:33,0:33:93.31:0,93,1531	0/0:31,0:31:78.27:0,78,1314	0/0:29,0:29:60.19:0,60,961	0/0:11,0:11:24.08:0,24,389	0/0:18,0:18:45.15:0,45,757	0/0:16,0:16:36.10:0,36,561	0/0:20,0:20:48.14:0,48,751	0/0:34,0:34:78.27:0,78,1303	0/0:21,0:20:54.05:0,54,775	1/1:10,12:20:42.13:903,42,0	1/1:5,18:23:56:1303,56,0	1/1:4,14:19:30.10:737,30,0	0/0:22,0:22:48.16:0,48,805	0/0:26,0:26:69.24:0,69,1140	0/0:23,0:23:57.11:0,57,924	0/0:20,0:20:57.19:0,57,936	0/0:27,0:27:63.20:0,63,1031	0/0:23,0:23:63.20:0,63,1030	0/0:17,0:17:36.11:0,36,561
chr10	15570665	.	ATGTGTG	A	184.62	PASS	AB=0.931;AC=12;AF=0.261;AN=46;BaseQRankSum=3.194;DP=499;FS=4.300;HRun=0;HaplotypeScore=99.4157;InbreedingCoeff=-0.2730;MQ=52.75;MQ0=21;MQRankSum=1.905;QD=0.77;ReadPosRankSum=1.153;VQSLOD=1.3903;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:21:2.88:0,3,15	0/0:5,0:5:2.98:0,3,22	./.	./.	0/0:14,0:13:4.22:0,4,40	0/1:13,0:13:26.54:27,0,45	0/1:27,0:22:29.16:29,0,36	./.	0/0:12,0:12:12.02:0,12,218	0/0:7,0:7:11.02:0,11,194	0/0:9,0:8:3.01:0,3,46	0/1:14,1:15:36.89:46,0,37	0/1:11,0:11:16.02:16,0,16	0/1:12,0:12:18.43:18,0,22	0/1:21,0:21:12.44:16,0,12	0/1:16,1:22:35.72:61,0,36	0/0:30,0:29:25.74:0,26,398	0/1:18,9:26:38.84:51,0,39	0/0:18,0:17:5.64:0,6,51	0/0:10,0:14:2.70:0,3,15	1/1:47,0:42:1.90:9,2,0	./.	./.	0/1:25,0:25:10.99:11,0,39	0/1:15,0:15:28.44:31,0,28	0/0:15,0:15:19.60:0,20,381	0/0:16,0:16:14.81:0,15,279	0/0:7,0:6:15.05:0,15,397
chr10	15572795	.	T	TA	19175.79	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-2.005;DP=723;FS=39.747;HRun=8;HaplotypeScore=90.3433;InbreedingCoeff=0.9931;MQ=75.12;MQ0=0;MQRankSum=-7.601;QD=27.59;ReadPosRankSum=3.387;VQSLOD=2.6513;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,19:21:57.17:653,57,0	1/1:2,6:8:18.05:208,18,0	0/0:18,0:19:42.02:0,42,384	0/0:9,0:9:20.72:0,21,169	1/1:14,26:62:99:1401,159,0	1/1:5,17:36:88.11:770,88,0	1/1:4,16:37:90.75:770,91,0	1/1:6,27:33:81.23:925,81,0	1/1:3,20:24:54.16:623,54,0	1/1:5,18:23:57.12:632,57,0	1/1:4,22:26:63.19:727,63,0	1/1:2,15:17:42.12:484,42,0	1/1:5,16:22:29.70:591,30,0	1/1:1,16:17:45.13:519,45,0	1/1:4,19:23:51.15:589,51,0	1/1:1,21:22:63.19:727,63,0	1/1:2,19:21:57.17:658,57,0	1/1:3,12:15:36.02:398,36,0	1/1:2,36:38:99:1177,102,0	1/1:4,53:57:99:1666,147,0	1/1:3,25:28:72.21:831,72,0	1/1:4,13:17:33.10:381,33,0	1/1:0,19:19:57.17:656,57,0	1/1:2,22:24:60.18:692,60,0	1/1:3,21:24:51.15:589,51,0	1/1:0,32:32:96.26:1089,96,0	1/1:1,23:25:66.19:758,66,0	1/1:1,21:22:57.17:658,57,0
chr10	15572976	.	T	TGGGACA	5221.32	PASS	AB=0.794;AC=6;AF=0.107;AN=56;BaseQRankSum=6.130;DP=834;FS=5.449;HRun=0;HaplotypeScore=175.4040;InbreedingCoeff=-0.1239;MQ=67.62;MQ0=0;MQRankSum=-11.048;QD=16.07;ReadPosRankSum=-2.921;VQSLOD=3.6943;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,99,2071	0/0:9,0:9:15.04:0,15,276	0/0:16,0:14:12.04:0,12,213	0/0:20,0:20:21.07:0,21,334	0/1:34,17:52:99:868,0,1024	0/1:31,15:47:99:1381,0,969	0/1:51,9:63:99:596,0,1345	0/0:16,0:16:11.31:0,11,215	0/0:22,0:22:54.19:0,54,1130	0/0:33,0:33:69.20:0,69,1335	0/0:21,0:21:39.11:0,39,741	0/0:30,0:30:69.21:0,69,1367	0/0:21,0:21:45.11:0,45,828	0/0:22,0:22:39.13:0,39,816	0/0:23,0:23:48.16:0,48,1004	0/0:25,0:25:54.17:0,54,1079	0/0:29,0:29:63.19:0,63,1259	0/0:26,0:26:45.11:0,45,862	0/1:35,6:44:99:601,0,474	0/1:36,16:53:99:1277,0,1153	0/1:54,7:65:99:498,0,1711	0/0:20,0:20:24.07:0,24,464	0/0:14,0:14:30.10:0,30,627	0/0:28,0:28:57.20:0,57,1159	0/0:18,0:18:27.08:0,27,527	0/0:28,0:28:63.22:0,63,1308	0/0:27,0:27:66.21:0,66,1330	0/0:14,0:14:42.13:0,42,810
chr10	15573497	.	GGTCCTGTTT	G	10575.72	PASS	AB=0.726;AC=9;AF=0.161;AN=56;BaseQRankSum=16.292;DP=868;FS=2.046;HRun=0;HaplotypeScore=252.4892;InbreedingCoeff=0.6020;MQ=75.35;MQ0=0;MQRankSum=-17.248;QD=39.17;ReadPosRankSum=-2.644;VQSLOD=3.6103;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,147,6875	0/0:13,0:13:30.10:0,30,1376	0/0:21,0:21:48.16:0,48,1998	0/0:19,0:19:45.15:0,45,1705	0/1:24,17:41:99:1071,0,1981	0/1:30,17:47:99:1298,0,3069	0/1:40,22:62:99:1642,0,3276	0/0:23,0:23:57.20:0,57,2428	0/0:24,0:24:69.24:0,69,3190	0/0:34,0:34:87.30:0,87,4005	0/0:21,0:21:60.21:0,60,2833	0/0:40,0:40:99:0,102,4858	0/0:29,0:29:87.30:0,87,3928	0/0:26,0:26:69.24:0,69,3251	0/0:32,0:32:87.30:0,87,4100	0/0:32,0:32:90.30:0,90,4110	0/0:29,0:29:81.28:0,81,3758	0/0:32,0:32:90.29:0,90,4088	1/1:14,23:37:69.17:1828,69,0	1/1:4,26:30:75.26:2235,75,0	1/1:17,36:53:82.18:2501,82,0	0/0:22,0:22:63.22:0,63,2850	0/0:22,0:22:63.22:0,63,3004	0/0:39,0:39:99:0,111,5272	0/0:21,0:21:60.21:0,60,2740	0/0:25,0:25:75.26:0,75,3588	0/0:33,0:33:96.33:0,96,4371	0/0:10,0:10:21.07:0,21,1004
chr10	15574400	.	G	GT	532.97	PASS	AB=0.749;AC=4;AF=0.071;AN=56;BaseQRankSum=5.231;DP=762;FS=6.929;HRun=1;HaplotypeScore=104.4179;InbreedingCoeff=-0.0796;MQ=55.52;MQ0=23;MQRankSum=-5.354;QD=3.37;ReadPosRankSum=-0.675;VQSLOD=-0.2956;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,147,2041	0/0:11,0:11:33.11:0,33,461	0/0:29,0:10:15.09:0,15,311	0/0:22,0:4:12.04:0,12,166	0/0:31,1:29:60.20:0,60,836	0/1:27,11:31:99:104,0,959	0/1:29,8:29:14.35:14,0,942	0/0:41,0:40:99:0,114,1559	0/0:22,0:22:63.21:0,63,881	0/0:24,0:24:72.24:0,72,1007	0/0:21,0:20:57.19:0,57,796	0/0:26,0:26:78.22:0,78,1069	0/0:31,0:31:90.30:0,90,1255	0/0:15,0:15:42.14:0,42,587	0/0:31,0:31:87.24:0,87,1199	0/0:17,0:17:45.15:0,45,628	0/0:34,0:34:96.28:0,96,1305	0/0:28,0:28:84.25:0,84,1153	0/0:25,3:23:12.17:0,12,698	0/1:12,16:19:99:275,0,328	0/1:38,17:50:99:248,0,1369	0/0:22,0:22:66.22:0,66,923	0/0:17,0:17:51.17:0,51,710	0/0:16,0:16:45.15:0,45,628	0/0:21,0:21:63.21:0,63,880	0/0:30,0:30:90.29:0,90,1242	0/0:29,0:29:87.29:0,87,1214	0/0:6,0:6:18.06:0,18,251
chr10	15574587	.	GACACACAC	G	1461.71	PASS	AB=0.855;AC=19;AF=0.380;AN=50;BaseQRankSum=-1.160;DP=599;FS=38.031;HRun=0;HaplotypeScore=150.7957;InbreedingCoeff=0.1114;MQ=55.59;MQ0=37;MQRankSum=-4.713;QD=5.06;ReadPosRankSum=-2.108;VQSLOD=1.0593;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:30:18:85,0,18	0/0:8,0:8:12.70:0,13,64	./.	./.	0/0:24,0:22:6.26:0,6,234	0/0:19,0:19:2.04:0,2,6	0/0:46,0:40:19.71:0,20,206	0/0:26,0:24:4.22:0,4,23	0/1:14,1:20:25.99:38,0,26	0/0:19,0:24:13.90:0,14,179	0/0:3,0:11:5.74:0,6,30	1/1:16,7:21:2.94:72,3,0	1/1:6,12:15:7.74:293,8,0	1/1:8,2:6:3.01:75,3,0	1/1:10,15:24:5.18:319,5,0	1/1:15,9:22:12.04:280,12,0	0/1:17,2:28:10.43:187,0,10	0/1:19,1:20:7.48:139,0,7	0/0:11,0:9:10.25:0,10,113	0/0:12,0:12:8.96:0,9,76	0/0:40,0:37:21.43:0,21,284	0/1:12,0:12:13.79:14,0,14	0/0:15,1:14:2.04:0,2,6	0/1:14,9:23:1.11:70,0,1	0/1:11,0:11:15.97:16,0,22	0/1:14,0:20:19.20:19,0,41	0/1:9,0:8:6.07:6,0,26	./.
chr10	15574596	.	A	ACACC	1324.08	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=4.237;DP=643;FS=4.649;HRun=0;HaplotypeScore=136.8872;InbreedingCoeff=0.4344;MQ=47.40;MQ0=43;MQRankSum=-0.648;QD=9.66;ReadPosRankSum=0.460;VQSLOD=3.0406;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:32:60.25:0,60,479	0/0:10,0:9:18.34:0,18,133	0/0:33,0:16:42.03:0,42,391	0/0:26,0:9:24.06:0,24,266	0/1:23,0:22:51.36:145,0,51	0/0:4,14:20:3.76:0,4,25	1/1:48,0:42:28.15:603,28,0	0/0:24,0:21:59.96:0,60,527	0/0:29,0:24:47.81:0,48,406	0/0:24,0:22:52.29:0,52,425	0/0:14,0:14:8.86:0,9,60	0/0:24,0:22:25.15:0,25,203	0/0:18,0:14:20.79:0,21,206	0/0:17,0:13:18:0,18,162	0/0:29,0:25:37.18:0,37,324	0/0:27,0:23:50.90:0,51,448	0/0:32,0:31:62.86:0,63,543	0/0:24,0:21:43.64:0,44,310	0/1:11,0:9:31.18:31,0,55	0/1:15,0:15:19.58:133,0,20	1/1:40,0:35:28.78:553,29,0	0/0:19,0:19:32.73:0,33,252	0/0:18,0:16:14.96:0,15,120	0/0:29,0:27:32.11:0,32,264	0/0:14,0:13:26.92:0,27,220	0/0:23,0:22:51.25:0,51,422	0/0:16,0:15:38.81:0,39,308	0/0:1,0:1:2.98:0,3,22
chr10	15575384	.	T	TA	805.65	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=8.294;DP=525;FS=5.240;HRun=3;HaplotypeScore=62.1858;InbreedingCoeff=0.9135;MQ=51.05;MQ0=29;MQRankSum=-2.095;QD=12.02;ReadPosRankSum=-2.270;VQSLOD=1.1221;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:78.11:0,78,866	0/0:4,0:2:6.02:0,6,71	0/0:11,0:3:8.98:0,9,82	0/0:9,0:7:15.01:0,15,149	1/1:2,8:10:23.45:197,23,0	1/1:4,1:8:20.29:120,20,0	1/1:3,2:8:14.56:107,15,0	0/0:60,0:60:99:0,177,2004	0/0:22,0:18:51.05:0,51,585	0/0:24,0:20:57.13:0,57,639	0/0:23,0:21:63.10:0,63,719	0/0:14,0:13:33.09:0,33,381	0/0:7,0:7:18.02:0,18,191	0/0:6,0:6:18.05:0,18,214	0/0:12,0:12:33.09:0,33,384	0/0:14,0:13:36.10:0,36,417	0/0:60,0:58:99:0,165,1909	0/0:27,0:24:66.06:0,66,716	1/1:7,13:16:29.54:319,30,0	1/1:4,4:7:11.35:161,11,0	1/1:0,5:4:6.02:80,6,0	0/0:5,0:5:12.03:0,12,134	0/0:4,0:4:12.04:0,12,141	0/0:8,0:8:18.03:0,18,193	0/0:18,0:18:48.10:0,48,556	0/0:39,0:34:99:0,102,1169	0/0:42,0:39:99:0,105,1216	0/0:20,0:17:51.16:0,51,608
chr10	15575584	.	TC	T	1808.27	PASS	AB=0.735;AC=8;AF=0.143;AN=56;BaseQRankSum=7.440;DP=509;FS=7.499;HRun=1;HaplotypeScore=53.7956;InbreedingCoeff=0.0215;MQ=68.52;MQ0=8;MQRankSum=-3.016;QD=10.76;ReadPosRankSum=1.173;VQSLOD=1.2229;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:75.24:0,75,1009	1/1:2,0:2:2.74:12,3,0	0/0:20,0:13:26.86:0,27,244	0/0:19,0:11:4.94:0,5,109	0/1:9,10:19:99:335,0,244	0/1:14,11:25:99:448,0,262	0/1:22,12:32:99:345,0,432	0/0:14,0:11:20.88:0,21,230	0/0:10,0:9:24.08:0,24,328	0/0:15,0:14:42.02:0,42,493	0/0:11,0:11:33.08:0,33,416	0/0:14,0:14:39.06:0,39,476	0/0:10,0:10:20.01:0,20,305	0/0:13,0:13:35.95:0,36,436	0/0:20,0:20:57.08:0,57,701	0/0:13,0:13:32.99:0,33,409	0/0:33,0:32:93.20:0,93,1205	0/0:28,0:28:75.17:0,75,997	0/1:24,7:30:99:214,0,596	0/1:16,12:28:99:295,0,421	0/1:22,7:29:99:291,0,483	0/0:9,0:9:27.06:0,27,340	0/0:11,0:11:21.02:0,21,252	0/0:14,0:14:39.05:0,39,500	0/0:18,0:18:51.03:0,51,653	0/0:20,0:19:55.06:0,55,738	0/0:13,0:12:28.09:0,28,362	0/0:7,0:7:17.98:0,18,208
chr10	15575666	.	AT	A	813.69	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=7.616;DP=470;FS=13.229;HRun=10;HaplotypeScore=41.8995;InbreedingCoeff=0.9301;MQ=61.50;MQ0=23;MQRankSum=-4.703;QD=6.41;ReadPosRankSum=-1.037;VQSLOD=-0.0290;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:90.24:0,90,996	0/0:6,0:5:15.03:0,15,159	0/0:15,0:11:5.98:0,6,50	0/0:13,0:8:6.26:0,6,64	1/1:3,22:17:15:130,15,0	1/1:4,21:21:22.06:169,22,0	1/1:6,20:20:17.98:156,18,0	0/0:17,0:17:33.08:0,33,358	0/0:11,0:11:30.03:0,30,318	0/0:11,1:10:27.07:0,27,299	0/0:16,0:16:42.11:0,42,465	0/0:14,1:15:39.06:0,39,400	0/0:8,0:8:18.03:0,18,185	0/0:10,1:12:29.89:0,30,296	0/0:16,1:16:35.93:0,36,379	0/0:10,0:10:30.07:0,30,325	0/0:35,0:35:99:0,102,1117	0/0:28,0:27:69.13:0,69,734	1/1:6,16:20:11.80:326,12,0	1/1:8,4:9:11.47:84,11,0	1/1:3,12:13:14.99:130,15,0	0/0:10,0:10:30.07:0,30,325	0/0:12,0:12:33.09:0,33,365	0/0:11,0:11:30.08:0,30,332	0/0:7,0:7:21.06:0,21,232	0/0:19,1:19:54.13:0,54,584	0/0:23,0:22:63.16:0,63,686	0/0:9,1:9:27.05:0,27,288
chr10	15575978	.	CTTG	C	2953.97	PASS	AB=0.731;AC=9;AF=0.161;AN=56;BaseQRankSum=10.155;DP=648;FS=9.538;HRun=0;HaplotypeScore=118.4109;InbreedingCoeff=0.5992;MQ=58.41;MQ0=3;MQRankSum=-7.563;QD=18.12;ReadPosRankSum=-0.520;VQSLOD=2.3971;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:75.17:0,75,1603	0/0:5,0:5:15.05:0,15,331	0/0:26,0:21:57.08:0,57,959	0/0:15,0:13:30.01:0,30,492	0/1:16,8:18:99:121,0,738	0/1:22,12:31:99:352,0,1022	0/1:22,16:38:99:436,0,1231	0/0:40,0:39:99:0,108,2276	0/0:27,0:27:63.22:0,63,1390	0/0:10,0:10:30.10:0,30,649	0/0:15,0:15:45.15:0,45,986	0/0:28,0:28:75.24:0,75,1613	0/0:25,0:25:69.24:0,69,1518	0/0:29,0:29:87.30:0,87,1887	0/0:27,0:27:75.26:0,75,1652	0/0:25,0:25:75.26:0,75,1656	0/0:28,0:28:75.26:0,75,1627	0/0:27,0:27:60.21:0,60,1323	1/1:2,22:21:57.15:855,57,0	1/1:0,11:11:30.10:482,30,0	1/1:2,30:31:54.18:867,54,0	0/0:15,0:15:45.15:0,45,982	0/0:14,0:14:42.14:0,42,927	0/0:17,0:17:39.13:0,39,858	0/0:14,0:14:42.12:0,42,813	0/0:27,0:27:78.27:0,78,1710	0/0:33,0:33:96.33:0,96,2116	0/0:8,0:8:24.08:0,24,529
chr10	15576041	.	TCTTC	T	5574.71	PASS	AB=0.998;AC=35;AF=0.625;AN=56;BaseQRankSum=-8.564;DP=652;FS=9.078;HRun=0;HaplotypeScore=139.3654;InbreedingCoeff=-0.0630;MQ=55.51;MQ0=7;MQRankSum=1.998;QD=9.70;ReadPosRankSum=10.851;VQSLOD=1.0305;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,20:34:12:170,12,0	1/1:6,0:5:11.99:103,12,0	0/0:22,0:13:4.99:0,5,56	0/0:23,0:11:8.93:0,9,78	1/1:21,0:17:31.10:244,31,0	1/1:20,0:16:26.72:190,27,0	1/1:16,0:16:23.54:174,24,0	1/1:38,0:36:54.53:421,55,0	1/1:3,27:30:21.07:349,21,0	0/1:32,1:33:99:358,0,356	0/1:22,0:22:99:276,0,148	0/1:36,0:36:99:243,0,304	0/1:22,0:22:99:272,0,169	0/1:23,0:23:78.27:280,0,78	0/1:28,0:28:3.76:273,0,4	0/1:24,0:24:81.03:262,0,81	0/1:26,0:26:99:229,0,226	1/1:7,23:30:8.91:88,9,0	1/1:18,0:18:27.89:185,28,0	1/1:4,0:4:2.94:18,3,0	0/0:13,0:12:2.84:0,3,15	1/1:21,0:20:40.10:333,40,0	0/1:25,0:25:99:212,0,255	0/1:10,0:10:9.14:9,0,177	0/1:23,0:23:99:267,0,317	0/1:24,0:24:57.15:191,0,57	0/1:40,0:40:49.59:429,0,50	0/0:19,0:19:44.31:0,44,438
chr10	15576071	.	T	TTTCT	2980.67	PASS	AB=1.000;AC=27;AF=0.519;AN=52;BaseQRankSum=-5.184;DP=560;FS=19.705;HRun=0;HaplotypeScore=154.8383;InbreedingCoeff=0.3174;MQ=52.23;MQ0=7;MQRankSum=0.816;QD=7.60;ReadPosRankSum=-2.224;VQSLOD=0.7785;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:29.92:0,30,266	0/0:5,0:4:3:0,3,27	./.	./.	0/0:19,0:14:7.99:0,8,33	0/0:19,0:16:2.67:0,3,11	0/0:11,0:9:5.59:0,6,27	1/1:30,0:26:2.49:6,2,0	0/0:34,0:34:39.03:0,39,388	0/1:34,0:34:99:187,0,144	0/1:23,0:23:38.03:38,0,57	1/1:27,0:27:23.16:654,23,0	1/1:23,0:23:5.07:398,5,0	1/1:21,0:21:26.78:376,27,0	1/1:17,5:23:12.02:184,12,0	1/1:18,0:18:21.05:320,21,0	0/1:28,0:28:69.04:77,0,69	0/1:29,0:29:1.93:2,0,117	0/0:26,0:25:13.85:0,14,82	0/0:11,0:10:22.66:0,23,125	0/0:9,0:9:2.94:0,3,18	1/1:18,0:17:5.99:50,6,0	0/1:20,0:20:37.60:38,0,113	0/1:10,0:10:31.26:38,0,31	0/1:23,0:23:49.08:49,0,142	1/1:23,0:23:26.48:296,26,0	1/1:24,0:24:20.54:297,21,0	1/1:18,0:18:17.04:148,17,0
chr10	15576097	.	TC	T	993.09	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=11.223;DP=536;FS=23.809;HRun=1;HaplotypeScore=112.4625;InbreedingCoeff=0.5881;MQ=54.39;MQ0=5;MQRankSum=-7.632;QD=10.34;ReadPosRankSum=0.608;VQSLOD=0.2979;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:31:56.46:0,56,686	0/0:6,0:5:15.05:0,15,217	0/0:12,0:8:21.07:0,21,283	0/0:6,0:4:9.92:0,10,131	0/1:22,0:20:46.66:47,0,402	0/1:19,0:19:56.73:57,0,348	0/1:16,0:13:20.09:20,0,308	0/0:25,0:23:69.23:0,69,975	0/0:31,0:31:60.07:0,60,742	0/0:29,0:29:87.28:0,87,1255	0/0:18,0:18:54.17:0,54,778	0/0:25,0:25:66.19:0,66,899	0/0:21,0:21:57.14:0,57,736	0/0:28,0:28:78.23:0,78,1060	0/0:19,0:19:36.10:0,36,475	0/0:13,0:13:33.08:0,33,421	0/0:28,0:28:70.79:0,71,1066	0/0:24,0:24:45.14:0,45,637	1/1:11,7:15:44.44:463,44,0	1/1:4,9:10:30.09:381,30,0	1/1:7,1:8:17.88:183,18,0	0/0:13,0:12:33.11:0,33,480	0/0:20,0:20:60.20:0,60,882	0/0:11,0:11:30.10:0,30,449	0/0:27,0:27:81.24:0,81,1152	0/0:20,0:20:60.17:0,60,860	0/0:19,0:19:51.17:0,51,740	0/0:13,0:13:33.09:0,33,471
chr10	15576101	.	TC	T	1827.12	PASS	AB=0.724;AC=9;AF=0.161;AN=56;BaseQRankSum=10.836;DP=526;FS=30.757;HRun=1;HaplotypeScore=108.4737;InbreedingCoeff=0.5912;MQ=54.32;MQ0=4;MQRankSum=-7.700;QD=18.09;ReadPosRankSum=0.300;VQSLOD=2.1761;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:33:65.79:0,66,831	0/0:6,0:5:15.04:0,15,197	0/0:13,0:8:21.07:0,21,293	0/0:7,0:5:12.92:0,13,164	0/1:14,8:20:99:238,0,321	0/1:11,9:20:99:342,0,257	0/1:12,6:15:99:210,0,248	0/0:26,0:25:74.97:0,75,977	0/0:31,0:31:60.07:0,60,741	0/0:25,0:25:75.24:0,75,1084	0/0:17,0:17:48.14:0,48,675	0/0:25,0:25:66.19:0,66,900	0/0:19,0:19:54.16:0,54,730	0/0:25,0:25:69.20:0,69,931	0/0:19,0:19:36.10:0,36,474	0/0:11,0:11:27.08:0,27,370	0/0:28,0:28:70.91:0,71,1078	0/0:24,0:24:48.13:0,48,655	1/1:8,11:16:48.11:589,48,0	1/1:10,4:11:33.08:385,33,0	1/1:2,6:7:18.04:221,18,0	0/0:11,0:10:27.08:0,27,375	0/0:19,0:19:57.19:0,57,840	0/0:11,0:11:33.05:0,33,442	0/0:26,0:26:78.17:0,78,1048	0/0:19,0:19:57.19:0,57,837	0/0:19,0:19:48.16:0,48,698	0/0:10,0:10:27.07:0,27,386
chr10	15576109	.	TC	T	2225.30	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=13.586;DP=532;FS=33.682;HRun=1;HaplotypeScore=107.3788;InbreedingCoeff=0.9873;MQ=55.33;MQ0=3;MQRankSum=-7.827;QD=19.52;ReadPosRankSum=1.164;VQSLOD=2.0031;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:35:81:0,81,1086	0/0:4,0:4:12.04:0,12,184	0/0:14,0:9:27.09:0,27,409	0/0:8,0:6:15.94:0,16,232	1/1:8,15:21:46.77:483,47,0	1/1:10,15:25:43.49:394,43,0	1/1:8,11:16:39.06:371,39,0	0/0:23,0:22:65.90:0,66,913	0/0:29,0:29:60.16:0,60,811	0/0:24,0:24:72.24:0,72,1125	0/0:18,0:18:51.15:0,51,754	0/0:25,0:25:66.12:0,66,903	0/0:20,0:20:57.01:0,57,793	0/0:23,0:23:63.19:0,63,897	0/0:20,0:20:39.10:0,39,531	0/0:14,0:14:36.05:0,36,496	0/0:28,0:28:77.73:0,78,1160	0/0:24,0:24:48.12:0,48,702	1/1:1,13:17:51.08:549,51,0	1/1:3,4:13:39.09:418,39,0	1/1:2,7:9:18.03:198,18,0	0/0:8,0:7:18.06:0,18,268	0/0:19,0:19:57.19:0,57,888	0/0:10,0:10:29.98:0,30,418	0/0:24,0:24:72.20:0,72,1043	0/0:21,0:21:63.21:0,63,936	0/0:17,0:17:45.15:0,45,673	0/0:9,0:9:27.08:0,27,388
chr10	15576315	.	TTA	T	1136.39	PASS	AB=1.000;AC=10;AF=0.179;AN=56;BaseQRankSum=8.901;DP=345;FS=4.614;HRun=0;HaplotypeScore=62.2370;InbreedingCoeff=0.6809;MQ=77.10;MQ0=4;MQRankSum=1.220;QD=15.57;ReadPosRankSum=2.292;VQSLOD=3.1739;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:63.20:0,63,1112	0/0:2,0:2:6.01:0,6,81	0/0:26,0:13:27.81:0,28,202	0/0:33,0:13:22.31:0,22,266	1/1:1,19:20:41.93:504,42,0	1/1:1,14:15:39.13:553,39,0	1/1:0,5:5:12.04:171,12,0	0/0:30,0:30:87:0,87,1277	0/0:9,0:9:27.09:0,27,479	0/0:18,0:18:54.15:0,54,889	0/0:11,0:11:33.10:0,33,562	0/0:6,0:6:18.03:0,18,273	0/0:4,0:4:12.03:0,12,192	0/0:5,0:5:15.04:0,15,243	0/0:5,0:5:15.05:0,15,272	0/0:7,0:7:21.05:0,21,332	0/0:17,0:17:48.12:0,48,799	0/0:19,0:19:56.76:0,57,859	0/1:20,0:19:40.88:43,0,41	1/1:6,0:6:7.06:17,7,0	0/1:7,0:7:5.94:6,0,15	0/0:4,0:4:12.01:0,12,183	0/0:4,0:4:12.04:0,12,223	0/0:2,0:2:6.02:0,6,112	0/0:14,0:14:42.13:0,42,725	0/0:11,0:11:33.09:0,33,555	0/0:12,0:12:25.04:0,25,487	0/0:12,0:12:36.11:0,36,636
chr10	15576316	.	TA	T	1215.06	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=8.843;DP=343;FS=5.509;HRun=4;HaplotypeScore=55.9745;InbreedingCoeff=0.9149;MQ=77.16;MQ0=4;MQRankSum=0.170;QD=16.88;ReadPosRankSum=1.752;VQSLOD=2.8545;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:63.19:0,63,801	0/0:2,0:2:6.01:0,6,64	0/0:26,0:13:15.88:0,16,97	0/0:33,0:13:21.80:0,22,174	1/1:20,0:20:35.12:204,35,0	1/1:15,0:15:37.93:215,38,0	1/1:5,0:5:11.68:67,12,0	0/0:30,0:30:71.56:0,72,857	0/0:9,0:9:24.08:0,24,314	0/0:17,0:17:48.14:0,48,606	0/0:11,0:11:33.05:0,33,398	0/0:5,0:5:15.04:0,15,183	0/0:4,0:4:12.03:0,12,143	0/0:5,0:5:15.03:0,15,169	0/0:6,0:6:18.03:0,18,207	0/0:7,0:7:21.05:0,21,250	0/0:17,0:17:48.11:0,48,587	0/0:19,0:19:36.98:0,37,538	1/1:5,15:19:41.83:482,42,0	1/1:0,6:6:18.06:215,18,0	1/1:0,6:6:18.06:215,18,0	0/0:4,0:4:10.26:0,10,107	0/0:4,0:4:12.04:0,12,158	0/0:2,0:2:6.02:0,6,79	0/0:14,0:14:42.12:0,42,529	0/0:11,0:11:30.09:0,30,382	0/0:11,0:12:19.32:0,19,308	0/0:12,0:12:36.10:0,36,457
chr10	15576342	.	A	AT	2908.72	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=-10.590;DP=327;FS=2.272;HRun=8;HaplotypeScore=42.8231;InbreedingCoeff=0.8607;MQ=59.05;MQ0=5;MQRankSum=-0.041;QD=20.78;ReadPosRankSum=0.593;VQSLOD=3.1969;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:39.01:0,39,352	1/1:0,7:7:15.04:173,15,0	0/0:19,0:7:11:0,11,90	0/1:20,0:9:0.83:1,0,109	0/0:18,0:18:39.01:0,39,356	0/0:15,0:14:32.75:0,33,286	0/0:7,0:7:14.97:0,15,130	1/1:5,17:22:48.08:512,48,0	1/1:0,7:7:21.06:242,21,0	1/1:2,17:19:51.11:574,51,0	1/1:1,9:10:24.06:268,24,0	0/0:4,0:4:12.01:0,12,110	0/0:9,0:9:27.01:0,27,247	0/0:3,0:3:6:0,6,55	0/0:4,0:4:12.01:0,12,110	0/0:11,0:11:29.98:0,30,263	1/1:3,19:22:45.13:519,45,0	0/0:19,0:19:44.68:0,45,395	0/0:20,0:20:54.02:0,54,494	0/0:9,0:9:21.01:0,21,192	0/0:9,0:9:24.01:0,24,220	0/0:3,0:3:6:0,6,55	0/0:3,0:3:9:0,9,82	0/0:2,0:2:2.99:0,3,24	0/0:15,0:15:42.02:0,42,382	1/1:1,13:14:39.12:450,39,0	1/1:3,7:10:10.49:166,10,0	1/1:3,6:9:18.52:208,19,0
chr10	15576870	.	CT	C	4593.81	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=12.467;DP=692;FS=1.618;HRun=2;HaplotypeScore=67.3667;InbreedingCoeff=0.9990;MQ=65.83;MQ0=0;MQRankSum=0.882;QD=32.12;ReadPosRankSum=1.299;VQSLOD=4.6667;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:60,0:60:99:0,181,2585	0/0:10,0:10:27.06:0,27,382	0/0:13,0:12:33.11:0,33,477	0/0:13,0:13:30.74:0,31,486	1/1:4,29:31:22.28:825,22,0	1/1:4,21:25:57.19:740,57,0	1/1:0,20:19:51.17:662,51,0	0/0:26,0:26:78.26:0,78,1152	0/0:30,0:30:87.27:0,87,1250	0/0:26,0:26:75.25:0,75,1108	0/0:20,0:20:57.19:0,57,854	0/0:18,0:18:54.18:0,54,807	0/0:31,0:31:93.27:0,93,1348	0/0:26,0:26:75.25:0,75,1103	0/0:34,0:34:99:0,102,1490	0/0:27,0:27:78.25:0,78,1147	0/0:31,0:31:93.28:0,93,1348	0/0:20,0:20:60.19:0,60,869	1/1:0,20:20:57.19:739,57,0	1/1:1,21:22:39.76:772,40,0	1/1:0,23:23:66.21:857,66,0	0/0:21,0:21:63.16:0,63,900	0/0:17,0:17:51.17:0,51,752	0/0:34,0:34:99:0,99,1431	0/0:18,0:18:51.16:0,51,744	0/0:36,0:36:99:0,108,1617	0/0:26,0:26:75.25:0,75,1119	0/0:12,0:11:33.11:0,33,493
chr10	15577306	.	TA	T	2056.40	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=11.652;DP=468;FS=9.616;HRun=9;HaplotypeScore=65.4314;InbreedingCoeff=0.8944;MQ=75.26;MQ0=0;MQRankSum=-0.438;QD=17.58;ReadPosRankSum=1.142;VQSLOD=3.4573;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:51.13:0,51,567	0/0:5,0:5:15.04:0,15,173	0/0:14,0:12:21.06:0,21,242	0/0:14,0:13:19.68:0,20,233	1/1:9,23:31:45.50:478,45,0	1/1:7,20:27:34.63:516,35,0	1/1:4,6:10:1.10:142,1,0	0/0:37,1:38:62.80:0,63,976	0/0:11,0:11:24.07:0,24,277	0/0:17,0:17:45.10:0,45,505	0/0:14,0:14:33.10:0,33,381	0/0:12,0:12:20.43:0,20,272	0/0:17,0:17:42.08:0,42,470	0/0:9,0:9:21.05:0,21,231	0/0:13,0:13:30.09:0,30,346	0/0:13,0:13:30.09:0,30,346	0/0:21,0:21:57.14:0,57,642	0/0:21,0:21:57.17:0,57,657	1/1:2,17:18:51.03:466,51,0	1/1:2,20:21:54.03:494,54,0	1/1:1,6:7:15.01:137,15,0	0/0:3,0:3:6.02:0,6,69	0/0:16,0:16:42.12:0,42,484	0/0:7,0:7:15.02:0,15,162	0/0:24,0:24:60.17:0,60,685	0/0:29,1:30:47.74:0,48,795	0/0:17,0:17:45.13:0,45,519	0/0:15,1:16:5.27:0,5,410
chr10	15577574	.	C	CA	5022.26	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-3.254;DP=652;FS=7.393;HRun=2;HaplotypeScore=60.0553;InbreedingCoeff=0.9989;MQ=69.28;MQ0=5;MQRankSum=-0.783;QD=33.26;ReadPosRankSum=-0.028;VQSLOD=4.4852;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,123,1452	0/0:9,0:7:21.05:0,21,246	0/0:28,0:22:63:0,63,724	0/0:22,0:17:47.78:0,48,540	1/1:2,25:25:66.18:919,66,0	1/1:1,24:25:63.21:900,63,0	1/1:1,17:18:42.14:605,42,0	0/0:26,0:26:72.20:0,72,862	0/0:28,0:28:81.22:0,81,976	0/0:19,0:15:45.13:0,45,546	0/0:14,0:11:30.09:0,30,361	0/0:21,0:21:63.16:0,63,742	0/0:26,0:26:78.23:0,78,948	0/0:26,0:26:78.23:0,78,943	0/0:36,0:36:99:0,102,1226	0/0:20,0:20:60.19:0,60,743	0/0:36,0:34:96.24:0,96,1147	0/0:18,0:18:48.13:0,48,580	1/1:2,21:19:35.27:682,35,0	1/1:1,23:24:60.20:859,60,0	1/1:4,30:33:61.60:1059,62,0	0/0:16,0:16:45.12:0,45,544	0/0:17,0:17:45.14:0,45,556	0/0:21,0:21:63.11:0,63,735	0/0:17,0:16:48.14:0,48,582	0/0:33,0:31:93.28:0,93,1143	0/0:16,0:13:36.11:0,36,446	0/0:11,0:10:30.05:0,30,354
chr10	15578069	.	A	AG	5768.18	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=12.523;DP=594;FS=2.704;HRun=0;HaplotypeScore=73.1435;InbreedingCoeff=0.9875;MQ=78.19;MQ0=1;MQRankSum=-0.983;QD=41.80;ReadPosRankSum=1.789;VQSLOD=5.6485;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,117,1612	0/0:6,0:4:12.04:0,12,166	0/0:34,0:33:96.23:0,96,1188	0/0:20,0:19:51.15:0,51,669	1/1:1,19:19:48.16:767,48,0	1/1:0,13:13:36.12:575,36,0	1/1:0,30:30:84.29:1342,84,0	0/0:32,0:32:93.29:0,93,1265	0/0:28,0:27:74.89:0,75,1046	0/0:20,0:16:48.16:0,48,666	0/0:13,0:13:39.13:0,39,546	0/0:16,0:16:48.16:0,48,668	0/0:24,0:24:63.19:0,63,848	0/0:23,0:23:63.13:0,63,841	0/0:22,0:22:66.22:0,66,921	0/0:17,0:17:51.16:0,51,695	0/0:24,0:24:72.24:0,72,1006	0/0:31,0:31:93.25:0,93,1260	1/1:1,16:16:42.13:638,42,0	1/1:0,15:15:39.13:623,39,0	1/1:0,43:43:99:1823,114,0	0/0:18,0:18:54.17:0,54,728	0/0:13,0:13:33.11:0,33,461	0/0:17,0:17:47.79:0,48,670	0/0:17,0:17:51.17:0,51,713	0/0:23,0:20:60.19:0,60,818	0/0:14,0:14:42.14:0,42,587	0/0:4,0:4:12.04:0,12,168
chr10	15578277	.	CTGTGTGTGTGTG	C	7753.46	PASS	AC=44;AF=0.917;AN=48;BaseQRankSum=3.407;DP=583;FS=1.442;HRun=0;HaplotypeScore=220.8463;InbreedingCoeff=0.4667;MQ=57.88;MQ0=8;MQRankSum=2.361;QD=16.89;ReadPosRankSum=4.142;VQSLOD=3.6806;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:27,5:32:18.06:529,18,0	1/1:3,1:6:9.03:190,9,0	0/0:26,0:17:3.01:0,3,45	0/0:34,0:23:12.01:0,12,153	1/1:24,0:23:5.86:106,6,0	1/1:10,0:10:3.01:84,3,0	./.	1/1:29,4:32:2.85:229,3,0	1/1:10,5:17:15.05:477,15,0	1/1:18,8:25:21.01:482,21,0	1/1:7,4:11:6.02:187,6,0	1/1:12,5:18:20.81:662,21,0	1/1:14,5:19:14.79:515,15,0	1/1:13,4:18:12.04:393,12,0	1/1:10,5:15:12.04:412,12,0	1/1:14,4:18:11.98:295,12,0	1/1:17,12:28:21.07:613,21,0	./.	1/1:21,0:20:6.02:167,6,0	1/1:26,0:24:12.04:330,12,0	1/1:31,0:30:5.23:90,5,0	1/1:16,5:20:9.03:309,9,0	1/1:10,8:19:14.63:515,15,0	./.	1/1:12,5:17:6.69:286,7,0	1/1:23,4:28:9.37:389,9,0	1/1:10,6:17:14.84:495,15,0	./.
chr10	15578331	.	TGCCAATATACA	T	6818.59	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=8.180;DP=566;FS=10.007;HRun=0;HaplotypeScore=231.9396;InbreedingCoeff=0.9926;MQ=70.37;MQ0=2;MQRankSum=-10.734;QD=61.43;ReadPosRankSum=-0.233;VQSLOD=3.3619;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,127,6638	0/0:7,0:7:21.07:0,21,999	0/0:25,0:17:50.91:0,51,2436	0/0:29,0:25:75.09:0,75,3634	1/1:0,14:14:33.11:1038,33,0	1/1:0,13:13:30.10:1021,30,0	1/1:3,16:19:36.12:1130,36,0	0/0:31,0:31:87.30:0,87,4725	0/0:19,0:19:57.20:0,57,3010	0/0:21,0:21:57.19:0,57,2995	0/0:16,0:15:45.15:0,45,2371	0/0:27,0:27:78.25:0,78,3919	0/0:19,0:19:57.15:0,57,2742	0/0:23,0:23:65.92:0,66,3192	0/0:20,0:20:57.19:0,57,2834	0/0:14,0:14:39.13:0,39,2077	0/0:28,0:28:72.25:0,72,3848	0/0:12,0:12:33.11:0,33,1873	1/1:4,14:18:42.11:1273,42,0	1/1:2,15:18:43.39:1208,43,0	1/1:5,24:29:45.04:1150,45,0	0/0:20,0:20:60.14:0,60,3047	0/0:20,0:20:48.63:0,49,2356	0/0:22,0:22:45.63:0,46,2404	0/0:14,0:13:33.11:0,33,1474	0/0:19,0:19:57.20:0,57,2962	0/0:20,0:20:54.13:0,54,2506	0/0:4,0:4:12.04:0,12,693
chr10	15578796	.	A	ATGTGTGTG	3193.24	PASS	AB=0.879;AC=41;AF=0.854;AN=48;BaseQRankSum=-3.687;DP=607;FS=3.198;HRun=0;HaplotypeScore=145.7807;InbreedingCoeff=0.1195;MQ=58.16;MQ0=17;MQRankSum=0.485;QD=6.32;ReadPosRankSum=1.763;VQSLOD=2.3719;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:27:16.59:250,17,0	1/1:8,0:6:6.02:127,6,0	./.	./.	0/0:29,0:28:1.18:0,1,62	1/1:19,0:16:1.93:6,2,0	0/1:21,0:20:10.94:11,0,140	1/1:30,0:29:7.84:128,8,0	1/1:19,0:18:6.49:161,6,0	1/1:30,0:28:18.72:245,19,0	1/1:15,0:15:11.46:187,11,0	1/1:13,0:10:12.04:260,12,0	1/1:6,6:12:9.03:310,9,0	0/1:19,4:26:29.74:66,0,30	1/1:17,0:26:2.97:38,3,0	1/1:16,0:26:8.97:176,9,0	1/1:16,4:19:3.01:81,3,0	0/1:22,0:18:68.74:370,0,69	0/1:25,0:22:2.92:3,0,24	./.	1/1:27,0:23:3.01:50,3,0	./.	1/1:13,0:13:9.03:167,9,0	1/1:22,0:28:0.47:1,0,0	0/1:10,13:23:0:0,0,0	1/1:21,0:26:20.95:405,21,0	1/1:22,0:20:6.02:106,6,0	1/1:6,0:15:6.02:161,6,0
chr10	15578855	.	AGAGAGAGAGTGTGTGTGT	A	398.83	PASS	AB=0.870;AC=9;AF=0.180;AN=50;BaseQRankSum=2.984;DP=566;FS=5.006;HRun=0;HaplotypeScore=128.5753;InbreedingCoeff=0.5801;MQ=30.23;MQ0=178;MQRankSum=-0.333;QD=3.12;ReadPosRankSum=2.526;VQSLOD=2.3888;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:33,0:18:2.70:16,3,0	0/0:8,0:5:5.98:0,6,50	./.	./.	0/1:17,2:17:12.89:29,0,13	1/1:16,12:17:5.92:171,6,0	1/1:18,14:17:6.02:116,6,0	0/0:35,0:27:60.49:0,60,1078	0/0:21,0:15:13.62:0,14,316	0/0:23,0:13:25.33:0,25,965	0/0:9,0:7:3.01:0,3,95	0/0:26,0:13:21.54:0,22,812	0/0:11,0:6:9.75:0,10,138	0/0:19,0:14:8.80:0,9,295	0/0:18,0:11:9.08:0,9,402	0/0:24,0:20:27.23:0,27,923	0/0:24,0:13:18.06:0,18,472	0/0:23,0:14:32.90:0,33,1076	1/1:14,0:8:9.03:198,9,0	0/0:12,0:6:0.89:0,1,2	./.	0/0:23,0:15:6.02:0,6,129	0/0:13,0:8:9.03:0,9,407	0/0:27,0:12:15.05:0,15,640	0/0:29,0:18:21.89:0,22,622	0/0:26,0:19:39.09:0,39,1287	0/0:24,0:11:21.54:0,22,1037	0/0:21,0:11:18.06:0,18,886
chr10	15578863	.	AGT	A	913.85	PASS	AB=1.000;AC=39;AF=0.813;AN=48;BaseQRankSum=-1.602;DP=614;FS=1.451;HRun=0;HaplotypeScore=80.7264;InbreedingCoeff=0.1248;MQ=30.21;MQ0=182;MQRankSum=1.384;QD=1.78;ReadPosRankSum=-0.509;VQSLOD=1.7896;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:23,10:18:2.89:17,3,0	1/1:9,0:6:2.98:21,3,0	./.	./.	0/0:20,0:15:0:0,0,0	1/1:31,0:17:4.01:27,4,0	1/1:37,0:19:2.53:15,3,0	0/1:37,0:28:17.05:17,0,18	1/1:22,0:16:4.46:45,4,0	1/1:26,0:15:0.05:67,0,0	1/1:10,0:8:2.80:13,3,0	1/1:28,0:15:8.34:50,8,0	1/1:11,0:6:2.97:21,3,0	1/1:21,0:16:4.60:39,5,0	1/1:22,0:15:8.95:66,9,0	1/1:25,0:21:15.92:105,16,0	1/1:25,0:15:7.80:61,8,0	0/1:26,0:16:21.29:21,0,81	./.	0/0:13,0:7:3:0,3,25	./.	1/1:28,0:20:11.88:84,12,0	1/1:13,0:8:6.85:46,7,0	1/1:30,0:15:8.93:63,9,0	1/1:27,0:16:16.33:108,16,0	0/1:26,0:17:2.25:71,0,2	1/1:26,0:13:9.32:70,9,0	0/0:23,0:13:3.47:0,3,40
chr10	15579288	.	CTA	C	428.21	PASS	AB=0.881;AC=5;AF=0.096;AN=52;BaseQRankSum=5.455;DP=670;FS=29.443;HRun=0;HaplotypeScore=80.7469;InbreedingCoeff=-0.1095;MQ=37.95;MQ0=138;MQRankSum=-2.560;QD=2.53;ReadPosRankSum=1.386;VQSLOD=0.1591;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:44:66.19:0,66,1108	0/0:8,0:8:21.06:0,21,335	./.	./.	0/1:34,5:33:68.59:69,0,649	0/1:32,9:34:98.33:98,0,827	0/1:20,15:24:99:240,0,429	0/0:31,0:18:39.08:0,39,654	0/0:16,0:12:20.90:0,21,336	0/0:22,0:16:39.10:0,39,586	0/0:18,0:18:21.03:0,21,340	0/0:21,0:13:33:0,33,487	0/0:20,0:15:27.09:0,27,469	0/0:22,0:20:45.11:0,45,698	0/0:22,0:18:36.11:0,36,608	0/0:16,0:10:18.06:0,18,319	0/0:32,0:28:45.11:0,45,734	0/0:11,0:9:21.07:0,21,370	0/1:22,0:17:99:112,0,387	0/0:27,0:24:22.38:0,22,941	0/1:32,0:26:25.33:25,0,588	0/0:30,0:27:36.12:0,36,636	0/0:18,0:16:18.03:0,18,287	0/0:25,0:20:30.06:0,30,465	0/0:19,0:17:42.12:0,42,681	0/0:15,0:9:24.08:0,24,425	0/0:21,0:16:30.10:0,30,530	0/0:7,0:6:12.04:0,12,206
chr10	15579360	.	C	CT	4041.71	PASS	AB=0.715;AC=6;AF=0.107;AN=56;BaseQRankSum=-6.309;DP=822;FS=2.871;HRun=1;HaplotypeScore=93.2549;InbreedingCoeff=-0.1200;MQ=53.55;MQ0=36;MQRankSum=-5.418;QD=14.75;ReadPosRankSum=-2.401;VQSLOD=2.6050;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:55:99:0,153,2088	0/0:17,0:17:48.16:0,48,671	0/0:33,0:23:69.23:0,69,942	0/0:20,0:15:45.15:0,45,629	0/1:27,10:32:99:199,0,876	0/1:31,11:41:99:366,0,977	0/1:28,33:57:99:1231,0,786	0/0:26,0:23:69.23:0,69,958	0/0:25,0:25:72.24:0,72,1004	0/0:26,0:25:72.24:0,72,999	0/0:16,0:16:42.14:0,42,582	0/0:24,0:23:63.21:0,63,879	0/0:28,0:28:78.16:0,78,1024	0/0:21,0:21:60.19:0,60,817	0/0:22,0:21:60.16:0,60,817	0/0:24,0:23:63.20:0,63,863	0/0:34,0:33:84.24:0,84,1146	0/0:22,0:21:60.17:0,60,815	0/1:16,18:33:99:731,0,526	0/1:23,17:34:99:529,0,644	0/1:35,25:59:99:985,0,1079	0/0:24,0:23:54.18:0,54,755	0/0:19,0:19:48.16:0,48,668	0/0:30,0:29:78.26:0,78,1090	0/0:21,0:21:60.20:0,60,828	0/0:23,0:22:63.21:0,63,881	0/0:27,0:27:71.96:0,72,958	0/0:10,0:10:30.10:0,30,419
chr10	15580564	.	TATAA	T	1159.45	PASS	AC=16;AF=0.364;AN=44;BaseQRankSum=4.620;DP=280;FS=4.438;HRun=0;HaplotypeScore=48.0463;InbreedingCoeff=0.7591;MQ=61.63;MQ0=1;MQRankSum=0.386;QD=11.15;ReadPosRankSum=-0.191;VQSLOD=1.8238;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:26.59:0,27,510	1/1:2,2:4:6.02:95,6,0	./.	./.	0/0:5,0:5:8.98:0,9,125	0/0:12,0:12:21.04:0,21,325	./.	1/1:25,7:31:6.02:95,6,0	./.	1/1:6,3:9:9.03:142,9,0	1/1:2,6:8:9.03:142,9,0	0/0:9,0:9:6.02:0,6,143	0/0:9,0:9:9.03:0,9,200	0/0:6,0:6:9.03:0,9,214	0/0:10,0:10:21.07:0,21,499	0/0:9,0:9:6.02:0,6,143	1/1:13,7:20:18.06:284,18,0	0/0:20,0:20:39.13:0,39,857	0/0:8,0:9:3.01:0,3,52	0/0:5,0:8:6.01:0,6,77	0/0:7,0:7:3.01:0,3,52	./.	0/0:13,0:13:15.04:0,15,312	./.	0/0:8,0:8:18.06:0,18,414	1/1:8,3:11:9.03:142,9,0	1/1:5,6:11:15.05:237,15,0	1/1:5,4:9:12.04:189,12,0
chr10	15582686	.	A	ACTGT	3179.49	PASS	AB=0.577;AC=4;AF=0.071;AN=56;BaseQRankSum=-7.088;DP=578;FS=1.205;HRun=0;HaplotypeScore=94.5898;InbreedingCoeff=0.4842;MQ=76.04;MQ0=0;MQRankSum=-4.702;QD=48.17;ReadPosRankSum=-0.693;VQSLOD=3.7874;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:74.99:0,75,1372	0/0:13,0:13:39.13:0,39,723	0/0:17,0:17:42.13:0,42,747	0/0:22,0:22:56.97:0,57,972	0/0:20,0:20:54.19:0,54,1025	0/0:21,0:21:57.17:0,57,1048	0/0:32,0:31:87.28:0,87,1601	0/0:27,0:27:72.24:0,72,1332	0/0:17,0:17:48.16:0,48,903	0/0:11,0:11:33.11:0,33,620	0/0:8,0:8:24.08:0,24,435	0/0:24,0:24:63.20:0,63,1155	0/0:22,0:22:63.20:0,63,1164	0/0:25,0:25:69.24:0,69,1310	0/0:27,0:27:78.25:0,78,1432	0/0:25,0:25:75.26:0,75,1408	0/0:29,0:29:87.30:0,87,1651	0/0:27,0:27:72.25:0,72,1366	0/1:6,11:16:11.83:857,0,12	1/1:4,15:18:45.15:1206,45,0	0/1:6,21:28:59.63:1232,0,60	0/0:18,0:18:51.17:0,51,968	0/0:8,0:8:24.08:0,24,456	0/0:18,0:18:54.17:0,54,992	0/0:15,0:15:45.15:0,45,846	0/0:24,0:24:66.23:0,66,1227	0/0:16,0:16:48.16:0,48,911	0/0:18,0:18:51.17:0,51,953
chr10	15584101	.	TTGTGTGTGTGTG	T	2177.40	PASS	AB=0.903;AC=32;AF=0.615;AN=52;BaseQRankSum=0.247;DP=506;FS=0.910;HRun=0;HaplotypeScore=161.8190;InbreedingCoeff=-0.0488;MQ=53.85;MQ0=21;MQRankSum=2.027;QD=6.42;ReadPosRankSum=2.115;VQSLOD=2.4575;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:20:11.95:151,12,0	1/1:7,3:10:3.01:98,3,0	./.	./.	1/1:9,0:9:3.48:55,3,0	0/1:12,0:11:17.40:156,0,17	0/1:27,0:25:31.41:152,0,31	0/0:30,0:29:9.88:0,10,56	1/1:10,0:10:5.81:62,6,0	0/0:15,0:15:11.92:0,12,212	1/1:6,7:12:2.84:18,3,0	0/1:17,0:17:27.76:68,0,28	1/1:10,0:10:11.85:121,12,0	0/1:11,0:11:33.82:121,0,34	1/1:6,9:15:3.01:103,3,0	0/1:11,0:16:2.97:108,0,3	0/1:32,0:28:21.15:245,0,21	1/1:4,5:9:3.01:103,3,0	0/1:13,0:13:23.94:24,0,49	0/0:13,0:13:8.67:0,9,54	0/0:52,0:51:27.56:0,28,255	1/1:6,8:12:3.01:103,3,0	0/1:5,5:10:0:0,0,0	1/1:25,0:23:29.84:292,30,0	0/1:9,0:8:7.11:69,0,7	0/1:11,5:15:8.52:82,0,9	0/1:12,8:20:22.37:94,0,22	0/1:17,0:15:11.60:108,0,12
chr10	15584143	.	GTGTGTGTGTA	G	2076.28	PASS	AB=1.000;AC=26;AF=0.464;AN=56;BaseQRankSum=9.343;DP=540;FS=18.977;HRun=0;HaplotypeScore=163.7515;InbreedingCoeff=-0.2204;MQ=48.45;MQ0=41;MQRankSum=1.395;QD=4.69;ReadPosRankSum=3.354;VQSLOD=1.5858;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:36,0:32:46.27:46,0,361	0/1:8,0:7:50.83:51,0,64	0/0:8,0:4:11.81:0,12,94	0/0:12,0:1:2.96:0,3,19	1/1:16,0:16:5.85:34,6,0	1/1:18,0:18:5.18:180,5,0	0/1:30,0:25:17.54:220,0,18	0/0:27,0:21:57.70:0,58,405	0/0:12,0:12:1.81:0,2,168	0/0:13,0:11:20.20:0,20,226	0/0:12,0:11:11.91:0,12,90	0/1:12,0:11:2.43:2,0,62	0/1:15,0:15:60.27:60,0,136	0/1:12,0:11:1.81:2,0,117	0/1:15,0:14:37.31:37,0,78	0/1:21,0:20:19.33:19,0,210	0/1:32,0:29:33.32:33,0,280	0/1:15,0:14:30.64:31,0,102	1/1:19,0:15:1.16:262,1,0	1/1:4,13:16:8.98:82,9,0	1/1:54,0:48:71.97:935,72,0	0/1:20,0:17:42.64:43,0,106	0/0:13,0:13:17.74:0,18,131	0/1:38,0:34:90.23:90,0,338	0/1:14,0:13:11.89:12,0,148	0/1:18,0:17:8.37:8,0,210	0/1:17,0:17:41.69:42,0,103	0/1:16,0:12:49.59:50,0,153
chr10	15584151	.	GTA	G	1673.03	PASS	AB=0.970;AC=22;AF=0.393;AN=56;BaseQRankSum=10.293;DP=567;FS=23.388;HRun=0;HaplotypeScore=117.6749;InbreedingCoeff=0.2521;MQ=49.44;MQ0=34;MQRankSum=2.235;QD=4.70;ReadPosRankSum=-0.596;VQSLOD=1.3673;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:39,0:36:55.24:55,0,369	0/1:9,0:8:16.27:16,0,80	0/0:14,0:6:10.96:0,11,110	0/0:16,0:3:8.94:0,9,71	1/1:18,0:18:3.82:30,4,0	1/1:18,0:18:30.47:218,30,0	1/1:31,1:27:20.31:308,20,0	0/0:30,0:25:66.17:0,66,505	0/0:13,0:13:7.94:0,8,213	0/1:12,0:11:17.74:18,0,163	0/0:12,0:11:11.91:0,12,90	0/1:7,4:11:8.80:9,0,82	0/1:16,0:16:62.94:63,0,137	0/1:12,0:12:0.88:1,0,117	0/0:16,0:15:16.48:0,16,121	0/0:21,0:20:31.52:0,32,252	0/1:33,1:32:5.52:6,0,358	0/0:15,0:14:19.04:0,19,127	1/1:21,0:17:23.03:234,23,0	1/1:16,0:15:8.82:54,9,0	1/1:52,0:46:97.61:737,98,0	0/0:20,0:19:17.94:0,18,168	0/0:14,0:14:20.43:0,20,154	0/1:32,0:29:81.34:81,0,286	0/1:15,0:15:23.74:24,0,191	0/0:23,0:22:4.75:0,5,315	0/1:19,0:19:0.24:0,0,142	0/0:17,0:13:27.53:0,28,210
chr10	15584157	.	ATGTG	A	2595.07	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-0.089;DP=579;FS=17.432;HRun=0;HaplotypeScore=130.6840;InbreedingCoeff=0.9484;MQ=50.59;MQ0=31;MQRankSum=2.958;QD=17.07;ReadPosRankSum=0.712;VQSLOD=2.5035;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:37:23.50:0,23,913	0/0:9,0:8:12.51:0,13,196	0/0:16,0:8:24.02:0,24,318	0/0:18,0:5:15.04:0,15,217	1/1:1,15:16:6.02:69,6,0	1/1:19,0:19:23.93:319,24,0	1/1:28,0:23:47.55:675,48,0	0/0:29,0:25:50.96:0,51,805	0/0:14,0:14:33.11:0,33,520	0/0:12,0:11:24.07:0,24,379	0/0:14,0:13:15.04:0,15,204	0/0:12,0:12:20.99:0,21,262	0/0:19,0:19:42.02:0,42,507	0/0:11,0:11:21.06:0,21,292	0/0:16,0:15:23.18:0,23,314	0/0:25,0:24:44.12:0,44,602	0/0:32,0:31:71.87:0,72,970	0/0:14,0:14:26.40:0,26,312	1/1:6,17:20:40.94:554,41,0	1/1:14,0:14:9.03:109,9,0	1/1:51,0:46:75.91:1048,76,0	0/0:19,0:18:20.32:0,20,343	0/0:15,0:15:24.08:0,24,371	0/0:35,0:32:54.15:0,54,787	0/0:15,0:15:37.65:0,38,523	0/0:24,0:23:51.15:0,51,729	0/0:21,0:21:28.30:0,28,367	0/0:15,0:12:25.72:0,26,435
chr10	15584977	.	GAGA	G	1945.72	PASS	AC=12;AF=0.231;AN=52;BaseQRankSum=7.947;DP=750;FS=6.880;HRun=0;HaplotypeScore=55.6039;InbreedingCoeff=0.9029;MQ=33.66;MQ0=181;MQRankSum=-0.114;QD=10.24;ReadPosRankSum=0.490;VQSLOD=2.0340;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:33:9.03:0,9,208	0/0:6,0:6:17.99:0,18,364	./.	./.	1/1:7,11:11:9.03:153,9,0	1/1:2,21:14:15.05:256,15,0	1/1:8,23:22:30.06:480,30,0	0/0:25,0:17:51.16:0,51,1094	0/0:31,0:21:9.03:0,9,207	0/0:25,0:19:54.19:0,54,1241	0/0:11,0:7:3.01:0,3,69	0/0:29,0:17:15.05:0,15,316	0/0:25,0:17:15.05:0,15,346	0/0:31,0:21:24.08:0,24,553	0/0:36,0:26:12.04:0,12,277	0/0:28,0:19:21.07:0,21,476	0/0:32,0:23:30.10:0,30,692	0/0:20,0:17:15.05:0,15,346	1/1:8,18:11:30.05:451,30,0	1/1:9,14:14:20.76:355,21,0	1/1:14,55:44:26.85:429,27,0	0/0:17,0:17:21:0,21,429	0/0:17,0:15:20.66:0,21,424	0/0:33,0:27:30.10:0,30,691	0/0:21,0:20:38.54:0,39,680	0/0:33,0:23:69.24:0,69,1583	0/0:19,0:15:21.02:0,21,424	0/0:15,0:15:18.06:0,18,415
chr10	15587896	.	T	TTTTC	4270.08	PASS	AB=1.000;AC=19;AF=0.365;AN=52;BaseQRankSum=-7.305;DP=582;FS=13.168;HRun=0;HaplotypeScore=100.4612;InbreedingCoeff=0.8391;MQ=75.36;MQ0=4;MQRankSum=1.817;QD=20.24;ReadPosRankSum=-0.891;VQSLOD=3.0801;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,18:30:42.14:977,42,0	0/0:12,0:12:12.02:0,12,142	./.	./.	0/0:28,0:28:27.07:0,27,292	0/0:19,0:19:27.06:0,27,285	0/0:17,0:17:11.61:0,12,123	0/0:24,0:23:2.90:0,3,17	0/0:19,0:19:36.08:0,36,470	0/0:24,0:25:33.09:0,33,454	0/0:22,0:22:27.08:0,27,377	1/1:13,11:23:14.97:349,15,0	1/1:11,9:20:27.09:627,27,0	1/1:15,0:15:20.89:217,21,0	1/1:5,11:16:24.08:558,24,0	0/0:16,0:16:24.06:0,24,312	0/1:32,0:32:54.12:54,0,597	0/0:12,0:12:15.05:0,15,230	0/0:18,0:18:12.03:0,12,130	0/0:32,0:32:42.09:0,42,446	0/0:13,0:13:9.02:0,9,97	1/1:7,5:12:18.06:386,18,0	1/1:11,0:19:16.29:209,16,0	1/1:7,5:12:6.02:140,6,0	1/1:11,17:30:33.11:754,33,0	0/0:26,0:26:42.14:0,42,626	0/0:28,0:27:51.12:0,51,739	0/0:23,0:23:24.06:0,24,320
chr10	15587940	.	CTTTT	C	2648.76	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=7.276;DP=523;FS=0.000;HRun=8;HaplotypeScore=96.1282;InbreedingCoeff=0.9662;MQ=62.94;MQ0=5;MQRankSum=1.933;QD=24.53;ReadPosRankSum=1.831;VQSLOD=0.7591;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:25:52.78:0,53,997	0/0:7,0:7:21.04:0,21,347	0/0:7,0:7:20.83:0,21,214	0/0:6,0:3:8.94:0,9,80	1/1:0,30:30:82.95:803,83,0	1/1:3,15:18:24.08:414,24,0	1/1:1,10:11:12.04:193,12,0	0/0:32,0:30:89.91:0,90,798	0/0:23,0:23:66.13:0,66,1244	0/0:22,0:22:45.60:0,46,1096	0/0:18,0:18:51.07:0,51,892	0/0:14,0:13:24.06:0,24,399	0/0:19,0:19:51.09:0,51,852	0/0:14,0:14:41.66:0,42,467	0/0:16,0:16:39.09:0,39,639	0/0:20,0:20:60.11:0,60,885	0/0:29,0:29:84.15:0,84,1726	0/0:12,0:12:30.05:0,30,580	1/1:1,10:11:30.04:368,30,0	1/1:4,26:30:68.70:897,69,0	1/1:1,7:8:9.03:155,9,0	0/0:11,0:11:33.07:0,33,543	0/0:17,0:17:42.02:0,42,544	0/0:10,0:10:21.03:0,21,261	0/0:38,0:38:87.16:0,87,1264	0/0:27,0:27:75.15:0,75,1462	0/0:29,0:28:81.17:0,81,1676	0/0:18,0:18:48.04:0,48,736
chr10	15590656	.	T	TAG	1286.74	PASS	AC=40;AF=0.909;AN=44;BaseQRankSum=-4.126;DP=148;FS=5.167;HRun=0;HaplotypeScore=20.8704;InbreedingCoeff=0.2958;MQ=75.90;MQ0=35;MQRankSum=-0.792;QD=18.92;ReadPosRankSum=-2.543;VQSLOD=2.2777;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:3:9.01:108,9,0	1/1:1,0:1:3.01:45,3,0	0/0:36,0:6:17.73:0,18,209	0/0:36,0:14:15.90:0,16,153	./.	./.	1/1:2,0:2:6.01:69,6,0	1/1:1,4:3:12.04:183,12,0	./.	1/1:4,0:3:3:28,3,0	1/1:3,0:1:3.01:46,3,0	1/1:4,0:2:6.02:88,6,0	./.	1/1:2,0:2:3.01:49,3,0	1/1:1,0:1:3.01:35,3,0	1/1:2,0:2:6.01:76,6,0	1/1:6,0:5:9.02:102,9,0	1/1:3,0:2:2.98:21,3,0	1/1:10,5:5:15.05:209,15,0	1/1:2,0:1:3.01:33,3,0	1/1:3,0:3:6.01:74,6,0	1/1:1,0:1:3.01:48,3,0	1/1:3,0:2:6:71,6,0	1/1:3,0:2:3.01:43,3,0	./.	1/1:3,0:1:3:27,3,0	1/1:1,0:1:3.01:47,3,0	./.
chr10	15590804	.	C	CT	879.57	PASS	AB=1.000;AC=43;AF=0.860;AN=50;BaseQRankSum=1.290;DP=83;FS=6.885;HRun=0;HaplotypeScore=15.3956;InbreedingCoeff=0.2275;MQ=102.90;MQ0=10;MQRankSum=-2.191;QD=15.99;ReadPosRankSum=-4.445;VQSLOD=2.3226;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,0:1:2.99:24,3,0	1/1:1,0:1:3:27,3,0	0/0:10,0:6:15.03:0,15,191	0/0:17,0:10:21.06:0,21,280	1/1:2,0:2:3:27,3,0	1/1:3,0:2:3.01:40,3,0	1/1:0,2:2:3.01:43,3,0	1/1:4,0:3:6:54,6,0	0/1:1,0:1:0:0,0,0	1/1:2,0:2:3:28,3,0	./.	1/1:4,0:4:9:80,9,0	1/1:0,1:1:3.01:42,3,0	1/1:1,0:1:3.01:44,3,0	1/1:2,0:2:6.01:64,6,0	./.	1/1:3,0:2:2.92:17,3,0	1/1:3,0:3:9.02:102,9,0	1/1:1,4:5:12.01:124,12,0	1/1:2,0:2:5.99:50,6,0	1/1:3,0:2:3.01:37,3,0	0/1:2,0:2:0:0,0,0	1/1:0,1:1:3.01:42,3,0	0/1:5,0:5:32.80:39,0,33	1/1:1,1:1:3.01:43,3,0	1/1:2,0:1:3:28,3,0	1/1:2,0:2:3.01:44,3,0	./.
chr10	15591518	.	A	AGG	3098.59	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=12.426;DP=506;FS=5.291;HRun=0;HaplotypeScore=75.2908;InbreedingCoeff=0.9753;MQ=77.20;MQ0=0;MQRankSum=-3.296;QD=37.79;ReadPosRankSum=1.100;VQSLOD=5.6327;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:78.25:0,78,1249	0/0:13,0:13:39.13:0,39,636	0/0:11,0:11:33.03:0,33,462	0/0:17,0:17:48.16:0,48,774	1/1:1,11:12:27.09:431,27,0	1/1:0,16:16:48.16:782,48,0	1/1:0,17:17:45.14:715,45,0	0/0:28,0:28:84.25:0,84,1321	0/0:15,0:15:45.15:0,45,734	0/0:26,0:26:78.26:0,78,1251	0/0:13,0:13:39.13:0,39,636	0/0:22,0:22:63.20:0,63,1001	0/0:22,0:22:66.19:0,66,1025	0/0:14,0:14:42.14:0,42,685	0/0:13,0:13:39.13:0,39,635	0/0:20,0:20:57.18:0,57,904	0/0:34,0:34:96.30:0,96,1533	0/0:18,0:18:54.18:0,54,878	1/1:1,7:8:6.29:323,6,0	1/1:3,15:18:53.54:795,54,0	1/1:0,11:11:14.96:234,15,0	0/0:19,0:19:54.17:0,54,857	0/0:9,0:9:27.09:0,27,436	0/0:28,0:28:84.29:0,84,1366	0/0:30,0:29:90.29:0,90,1424	0/0:24,0:24:72.22:0,72,1129	0/0:14,0:14:42.14:0,42,683	0/0:8,0:8:24.08:0,24,391
chr10	15591519	.	A	AC	2051.64	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=13.343;DP=516;FS=1.509;HRun=2;HaplotypeScore=71.7603;InbreedingCoeff=0.9966;MQ=77.42;MQ0=0;MQRankSum=-3.918;QD=22.80;ReadPosRankSum=-0.005;VQSLOD=3.4685;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:72.21:0,72,876	0/0:13,0:13:39.12:0,39,483	0/0:11,0:11:27.05:0,27,302	0/0:18,0:18:48.15:0,48,577	1/1:1,11:12:30.04:297,30,0	1/1:0,16:16:48.09:498,48,0	1/1:3,17:20:52.37:503,52,0	0/0:29,0:29:84.22:0,84,1016	0/0:15,0:15:45.14:0,45,558	0/0:27,0:27:78.24:0,78,951	0/0:13,0:13:39.12:0,39,479	0/0:21,0:21:60.19:0,60,743	0/0:22,0:22:66.17:0,66,790	0/0:14,0:14:42.13:0,42,521	0/0:13,0:13:39.11:0,39,471	0/0:20,0:20:60.15:0,60,717	0/0:33,0:33:90.28:0,90,1115	0/0:18,0:18:51.16:0,51,632	1/1:1,7:8:24.04:242,24,0	1/1:5,15:20:56.95:534,57,0	1/1:3,11:14:17.80:166,18,0	0/0:19,0:19:54.16:0,54,659	0/0:9,0:9:24.08:0,24,297	0/0:28,0:28:81.25:0,81,1003	0/0:30,0:29:87.25:0,87,1063	0/0:24,0:24:69.21:0,69,844	0/0:16,0:16:39.11:0,39,470	0/0:8,0:8:24.08:0,24,297
chr10	15591773	.	C	CTT	1755.18	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=1.154;DP=604;FS=2.112;HRun=1;HaplotypeScore=101.6605;InbreedingCoeff=0.8661;MQ=59.26;MQ0=31;MQRankSum=-0.092;QD=12.63;ReadPosRankSum=-0.739;VQSLOD=0.2588;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:24:19.26:0,19,150	0/0:13,0:13:26.25:0,26,216	0/0:18,0:9:23.76:0,24,191	0/0:37,0:19:37:0,37,302	1/1:4,17:20:14.88:222,15,0	1/1:27,1:27:38.59:364,39,0	1/1:23,0:23:29.19:411,29,0	0/0:43,0:40:99:0,109,906	0/0:24,0:22:50.16:0,50,472	0/0:20,0:19:43.72:0,44,333	0/0:21,0:21:25.55:0,26,219	0/0:20,0:19:23.58:0,24,213	0/0:15,0:13:33.79:0,34,300	0/0:13,0:13:14.70:0,15,115	0/0:26,0:26:51.33:0,51,436	0/0:30,0:30:47.42:0,47,390	0/0:7,0:5:11.95:0,12,113	0/0:19,0:18:34.41:0,34,260	0/1:26,0:25:51.48:349,0,51	1/1:15,0:14:21.86:170,22,0	1/1:26,0:23:17.09:417,17,0	0/0:21,0:20:34.62:0,35,282	0/0:13,0:13:29.69:0,30,257	0/0:26,0:25:59.95:0,60,541	0/0:15,0:13:29.49:0,29,247	0/0:20,0:20:56.55:0,57,465	0/0:29,0:29:45.05:0,45,367	0/0:9,0:8:20.39:0,20,145
chr10	15591810	.	T	TCA	1717.81	PASS	AB=0.946;AC=29;AF=0.518;AN=56;BaseQRankSum=7.143;DP=487;FS=44.079;HRun=0;HaplotypeScore=99.1091;InbreedingCoeff=-0.4468;MQ=48.97;MQ0=23;MQRankSum=3.103;QD=3.84;ReadPosRankSum=2.109;VQSLOD=0.1880;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:20:3.01:44,3,0	0/1:6,0:6:15.20:15,0,22	0/0:15,0:9:19.33:0,19,154	0/0:9,0:6:14.99:0,15,136	1/1:21,0:20:8:54,8,0	0/1:26,0:25:1.25:1,0,62	0/1:22,0:21:49.90:125,0,50	0/1:21,0:20:95.28:122,0,95	0/1:28,0:26:82.37:301,0,82	0/1:16,0:16:69.97:70,0,98	0/1:13,0:13:15.18:29,0,15	0/1:18,0:17:4.58:5,0,5	0/1:11,0:9:33.27:33,0,82	0/0:16,0:16:7.92:0,8,45	0/1:24,0:24:3.59:247,0,4	0/1:16,18:34:83.57:85,0,84	0/1:10,0:9:15.82:67,0,16	0/1:17,0:16:13.35:22,0,13	0/1:11,0:10:60.45:63,0,60	1/1:19,0:18:7.75:39,8,0	0/1:20,0:17:1.53:18,0,2	0/1:7,10:16:33.20:34,0,33	0/1:10,0:10:25.34:54,0,25	0/1:21,0:21:99:145,0,101	1/1:4,0:3:5.99:50,6,0	0/1:18,0:17:54.35:179,0,54	0/1:11,17:28:56.72:57,0,147	0/1:9,0:9:12.43:12,0,46
chr10	15591812	.	T	TCACA	5076.97	PASS	AB=0.870;AC=37;AF=0.661;AN=56;BaseQRankSum=0.959;DP=495;FS=24.707;HRun=0;HaplotypeScore=101.6790;InbreedingCoeff=-0.0583;MQ=49.26;MQ0=21;MQRankSum=4.311;QD=11.41;ReadPosRankSum=4.423;VQSLOD=2.6043;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,15:20:3.01:68,3,0	1/1:6,0:6:4.78:53,5,0	0/0:16,0:9:20.81:0,21,308	0/0:9,0:6:18.03:0,18,285	0/1:20,0:19:4.96:108,0,5	0/0:25,0:24:7.76:0,8,115	0/1:21,0:20:99:283,0,99	0/1:22,0:21:30.56:389,0,31	1/1:29,0:27:55.08:812,55,0	0/1:15,0:15:31.98:199,0,32	0/1:13,0:13:20.11:91,0,20	0/1:3,13:17:7.02:64,0,7	1/1:10,0:9:17.10:125,17,0	0/1:4,12:17:0.01:3,0,0	1/1:25,0:25:40.83:600,41,0	1/1:32,1:33:13.23:264,13,0	1/1:9,0:8:15.32:209,15,0	0/1:6,12:17:11.72:55,0,12	0/1:15,0:14:54.91:193,0,55	1/1:20,0:19:2.56:35,3,0	0/1:20,0:17:21.59:75,0,22	1/1:18,0:17:8.40:105,8,0	1/1:12,0:12:12.19:191,12,0	1/1:22,0:21:26.67:348,27,0	1/1:4,0:3:6.02:100,6,0	0/1:19,0:18:28.41:424,0,28	0/1:29,0:29:18.15:172,0,18	0/1:3,0:9:23.38:111,0,23
chr10	15591814	.	T	TCACACA	9403.89	PASS	AB=0.883;AC=49;AF=0.875;AN=56;BaseQRankSum=-2.254;DP=532;FS=7.296;HRun=0;HaplotypeScore=118.9598;InbreedingCoeff=0.4768;MQ=48.90;MQ0=20;MQRankSum=2.907;QD=18.62;ReadPosRankSum=2.514;VQSLOD=3.8986;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:21:0.67:87,0,1	1/1:6,0:6:5.11:100,5,0	0/0:16,0:9:13.22:0,13,383	0/0:11,0:8:21.07:0,21,364	1/1:21,0:20:12.01:222,12,0	0/1:12,0:25:0:0,0,0	1/1:22,0:21:30.03:574,30,0	1/1:27,0:26:47.96:806,48,0	1/1:33,0:31:66.40:1323,66,0	1/1:18,0:18:32.96:564,33,0	1/1:15,0:15:12.96:214,13,0	1/1:17,0:17:3.01:96,3,0	1/1:10,0:9:23.07:241,23,0	1/1:17,0:17:5.84:47,6,0	1/1:28,0:28:47.98:952,48,0	1/1:34,0:34:18.72:381,19,0	1/1:11,0:10:18.32:345,18,0	1/1:18,0:17:5.97:96,6,0	1/1:17,0:16:41.96:607,42,0	1/1:6,15:20:3.01:54,3,0	1/1:10,0:20:6.49:138,6,0	1/1:18,0:18:11.87:201,12,0	1/1:15,0:15:21.04:361,21,0	1/1:21,0:20:27.49:504,27,0	1/1:4,0:3:6.02:149,6,0	1/1:21,0:20:37.34:773,37,0	1/1:30,0:30:20.44:348,20,0	0/1:9,0:9:7.02:222,0,7
chr10	15592532	.	TG	T	5455.16	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=12.055;DP=701;FS=5.270;HRun=2;HaplotypeScore=67.4397;InbreedingCoeff=0.9955;MQ=83.45;MQ0=0;MQRankSum=-2.045;QD=34.75;ReadPosRankSum=1.830;VQSLOD=5.3526;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,126,1840	0/0:8,0:8:21.07:0,21,315	0/0:21,0:21:56.88:0,57,788	0/0:21,0:21:61.72:0,62,847	1/1:0,15:15:39.13:506,39,0	1/1:0,16:16:39.13:506,39,0	1/1:1,30:31:84.27:1091,84,0	0/0:26,0:26:75.24:0,75,1075	0/0:29,0:29:84.27:0,84,1236	0/0:34,0:34:99:0,99,1441	0/0:9,0:9:24.08:0,24,359	0/0:32,0:32:93.31:0,93,1391	0/0:23,0:23:69.23:0,69,1033	0/0:30,0:30:90.30:0,90,1348	0/0:27,0:27:81.26:0,81,1191	0/0:21,0:21:63.21:0,63,944	0/0:38,0:38:99:0,114,1706	0/0:21,0:21:57.17:0,57,831	1/1:0,22:22:66.07:819,66,0	1/1:0,15:15:42.14:545,42,0	1/1:0,58:58:99:1987,153,0	0/0:18,0:18:51.17:0,51,764	0/0:17,0:17:51.17:0,51,733	0/0:35,0:35:99:0,105,1572	0/0:25,0:24:75.25:0,75,1115	0/0:26,0:26:75.25:0,75,1124	0/0:35,0:34:99:0,102,1526	0/0:5,0:5:15.05:0,15,225
chr10	15593049	.	T	TC	867.45	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-2.965;DP=469;FS=9.997;HRun=1;HaplotypeScore=69.1093;InbreedingCoeff=0.9111;MQ=74.81;MQ0=1;MQRankSum=-2.986;QD=12.05;ReadPosRankSum=2.762;VQSLOD=1.3821;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:62.20:0,62,382	0/0:9,0:9:25.36:0,25,145	0/0:9,0:7:7.55:0,8,59	0/0:17,0:17:13.10:0,13,190	1/1:14,0:13:26.67:181,27,0	1/1:1,12:13:2.97:20,3,0	1/1:14,0:13:35.69:260,36,0	0/0:19,0:19:44.44:0,44,257	0/0:13,0:14:18.11:0,18,138	0/0:17,0:17:42.94:0,43,297	0/0:11,0:11:25.18:0,25,149	0/0:10,0:10:10.34:0,10,83	0/0:12,0:12:15.68:0,16,103	0/0:23,0:23:17.01:0,17,144	0/0:17,0:17:15.84:0,16,95	0/0:11,0:11:13.57:0,14,100	0/0:40,0:40:55.70:0,56,355	0/0:22,0:22:22.89:0,23,113	1/1:1,11:12:29.89:262,30,0	1/1:11,0:11:26.85:229,27,0	1/1:8,0:7:14.08:95,14,0	0/0:20,0:20:41.17:0,41,266	0/0:21,0:21:47.78:0,48,298	0/0:18,0:18:21.61:0,22,106	0/0:19,0:19:29.42:0,29,180	0/0:19,0:19:48.72:0,49,341	0/0:18,0:18:14.41:0,14,109	0/0:12,0:12:28.07:0,28,140
chr10	15593050	.	C	CAAA	7039.37	PASS	AB=0.763;AC=53;AF=0.946;AN=56;BaseQRankSum=-0.018;DP=575;FS=1.419;HRun=14;HaplotypeScore=126.1469;InbreedingCoeff=0.0559;MQ=70.90;MQ0=1;MQRankSum=-1.099;QD=12.24;ReadPosRankSum=-2.508;VQSLOD=2.3791;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:15,2:47:41.62:397,42,0	1/1:4,5:11:18.01:254,18,0	1/1:8,0:7:1.55:5,2,0	0/1:19,0:18:19.02:57,0,19	1/1:27,0:24:26.21:349,26,0	1/1:17,0:17:15.05:214,15,0	1/1:18,0:17:12.04:173,12,0	1/1:11,8:23:44.07:564,44,0	0/1:8,0:17:17.55:117,0,18	1/1:9,9:20:27.07:398,27,0	1/1:4,6:11:18.04:266,18,0	0/1:6,0:14:9.98:163,0,10	1/1:13,0:13:23.04:243,23,0	1/1:8,0:26:7.16:79,7,0	1/1:4,1:18:11.48:103,11,0	1/1:4,7:13:11.52:177,12,0	1/1:20,21:47:34.54:392,35,0	1/1:3,1:25:33.53:258,34,0	1/1:20,0:21:23.42:250,23,0	1/1:18,0:18:22.51:283,23,0	1/1:9,0:8:1.36:4,1,0	1/1:6,2:20:6.29:273,6,0	1/1:7,1:24:6.64:239,7,0	1/1:3,0:21:25.94:186,26,0	1/1:12,3:21:10.49:380,10,0	1/1:10,10:23:35.99:416,36,0	1/1:13,13:30:37.24:492,37,0	1/1:4,4:12:21.05:307,21,0
chr10	15593064	.	A	AG	787.22	PASS	AB=1.000;AC=12;AF=0.222;AN=54;BaseQRankSum=2.980;DP=480;FS=3.456;HRun=0;HaplotypeScore=71.0478;InbreedingCoeff=0.7969;MQ=68.72;MQ0=1;MQRankSum=-0.002;QD=9.05;ReadPosRankSum=1.540;VQSLOD=3.5754;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:54.82:0,55,347	0/0:7,0:7:15.91:0,16,74	0/1:10,0:7:0.77:1,0,42	0/1:12,0:11:10.81:11,0,70	1/1:16,0:14:31.55:189,32,0	1/1:11,0:11:29.46:200,29,0	1/1:11,0:11:26.57:177,27,0	0/0:19,0:19:45.24:0,45,296	0/0:17,0:17:19.80:0,20,163	0/0:16,0:16:41.47:0,41,275	0/0:12,0:12:30.55:0,31,216	0/0:18,0:18:29.90:0,30,224	0/0:17,0:17:29.67:0,30,205	0/0:22,0:22:3.04:0,3,90	0/0:19,0:19:24.47:0,24,182	0/0:14,0:14:28.63:0,29,200	0/0:25,0:25:34.37:0,34,205	0/0:25,0:25:36.95:0,37,219	1/1:14,0:14:28.83:211,29,0	1/1:13,0:13:23.50:172,24,0	./.	0/0:16,0:16:34.95:0,35,209	0/0:22,0:22:38.78:0,39,219	0/0:19,0:19:18.47:0,18,119	0/0:18,0:18:36.38:0,36,215	0/0:11,0:11:21.89:0,22,112	0/0:26,0:27:48.54:0,49,337	0/0:10,0:10:22.32:0,22,109
chr10	15593862	.	A	ATT	2865.69	PASS	AB=0.556;AC=27;AF=0.482;AN=56;BaseQRankSum=6.370;DP=528;FS=15.228;HRun=11;HaplotypeScore=76.2431;InbreedingCoeff=0.8647;MQ=72.86;MQ0=0;MQRankSum=0.653;QD=10.38;ReadPosRankSum=3.634;VQSLOD=0.5549;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:12,0:42:29.72:160,30,0	0/0:9,0:9:24.03:0,24,232	0/0:16,0:17:16.25:0,16,210	0/0:12,0:12:6.02:0,6,79	1/1:4,19:23:57.18:799,57,0	1/1:2,22:25:51.17:739,51,0	1/1:3,12:16:35.60:469,36,0	0/0:28,0:27:62.96:0,63,601	0/0:17,0:17:42.06:0,42,407	0/0:20,0:20:57.09:0,57,553	0/0:21,0:21:54.04:0,54,522	1/1:3,0:18:34.10:117,34,0	1/1:5,0:19:26.90:94,27,0	1/1:9,0:24:32.16:110,32,0	1/1:1,0:13:19.80:68,20,0	0/1:3,0:15:27.15:55,0,27	0/0:17,0:17:36.03:0,36,349	1/1:0,0:10:19.96:69,20,0	0/0:13,0:13:24.02:0,24,233	0/0:27,0:27:75.04:0,75,722	0/0:16,0:16:30:0,30,291	1/1:2,1:17:30.46:138,30,0	1/1:4,0:15:19.96:69,20,0	1/1:2,0:15:3.85:74,4,0	1/1:5,0:23:37.43:129,37,0	0/0:22,0:22:57.07:0,57,553	0/0:26,0:26:56.97:0,57,543	0/0:6,0:6:2.99:0,3,29
chr10	15593987	.	ATTT	A	934	PASS	AB=0.723;AC=11;AF=0.196;AN=56;BaseQRankSum=2.308;DP=498;FS=0.000;HRun=17;HaplotypeScore=82.7996;InbreedingCoeff=0.5576;MQ=67.59;MQ0=16;MQRankSum=0.029;QD=8.27;ReadPosRankSum=3.134;VQSLOD=-0.6203;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:24:48.45:0,48,638	0/0:8,0:9:21.01:0,21,254	0/1:17,1:12:15.83:16,0,89	0/0:12,0:8:6.47:0,6,52	1/1:9,11:24:40.36:379,40,0	1/1:3,12:18:37.39:371,37,0	1/1:4,7:12:6.23:182,6,0	0/0:29,0:31:61.36:0,61,893	0/0:10,0:10:20.99:0,21,270	0/0:19,0:22:51.11:0,51,743	0/0:11,0:12:36.10:0,36,534	0/0:14,0:15:36.12:0,36,554	0/0:14,0:14:30.09:0,30,403	0/0:22,0:22:38.92:0,39,516	0/0:13,0:14:19.94:0,20,303	0/0:12,0:10:17.82:0,18,212	0/0:21,0:18:45.04:0,45,623	0/0:21,0:19:42.58:0,43,608	0/1:6,2:13:48.77:49,0,58	0/1:5,2:16:41.61:42,0,42	1/1:4,2:9:1.76:54,2,0	0/0:20,0:23:42.05:0,42,555	0/0:11,0:13:27.05:0,27,365	0/0:16,0:17:28.31:0,28,376	0/0:7,0:10:21.01:0,21,263	0/0:24,0:24:43.31:0,43,605	0/0:25,0:31:74.93:0,75,916	0/0:11,0:14:27.05:0,27,382
chr10	15594660	.	G	GTAT	736.59	PASS	AB=0.879;AC=10;AF=0.263;AN=38;BaseQRankSum=-5.155;DP=239;FS=6.343;HRun=0;HaplotypeScore=35.4761;InbreedingCoeff=0.2663;MQ=75.11;MQ0=2;MQRankSum=1.188;QD=7.52;ReadPosRankSum=-1.617;VQSLOD=1.0683;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:7:2.98:0,3,21	./.	./.	./.	./.	0/0:9,0:14:11.90:0,12,83	0/0:4,0:4:0:0,0,0	1/1:30,0:28:3.74:10,4,0	0/0:4,0:4:9.03:0,9,116	0/1:6,1:7:32.70:51,0,33	0/0:10,0:10:3.01:0,3,39	./.	0/0:6,0:9:5.95:0,6,42	0/0:4,0:5:2.98:0,3,21	0/0:5,0:7:5.95:0,6,42	./.	1/1:13,14:27:30.07:532,30,0	0/0:15,0:20:5.95:0,6,42	0/0:11,0:11:3.01:0,3,39	0/0:3,0:3:3.01:0,3,39	0/0:6,0:6:6.02:0,6,77	./.	./.	./.	0/0:1,0:3:2.98:0,3,21	1/1:8,1:9:3.01:57,3,0	1/1:9,1:10:3.01:57,3,0	0/1:13,2:15:24.57:149,0,25
chr10	15595257	.	ATTTTAT	A	830.46	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=6.115;DP=326;FS=11.604;HRun=0;HaplotypeScore=66.5016;InbreedingCoeff=0.5909;MQ=67.96;MQ0=1;MQRankSum=-3.304;QD=27.68;ReadPosRankSum=-0.429;VQSLOD=1.7508;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:48.16:0,48,1409	0/0:6,0:6:15.05:0,15,497	0/0:6,0:6:3.01:0,3,100	0/0:8,0:4:2.98:0,3,100	0/0:21,0:21:48.14:0,48,1431	0/0:14,0:14:33.09:0,33,973	0/0:5,0:5:12.04:0,12,399	0/0:35,0:35:84.28:0,84,2512	0/0:5,0:5:12.04:0,12,376	0/0:16,0:16:33.10:0,33,917	0/0:7,0:6:15.05:0,15,474	0/0:10,0:10:18.06:0,18,505	0/0:8,0:8:12.04:0,12,357	0/0:5,0:5:9.03:0,9,275	0/0:3,0:3:6.02:0,6,191	0/0:7,0:7:15.05:0,15,354	0/0:26,0:26:54.18:0,54,1667	0/0:23,0:23:36.12:0,36,1138	1/1:4,14:18:42.14:802,42,0	1/1:6,3:9:6.02:117,6,0	1/1:1,2:3:3.01:33,3,0	0/0:2,0:2:3.01:0,3,100	0/0:7,0:7:6.02:0,6,129	0/0:3,0:3:3.01:0,3,100	0/0:18,0:18:36.12:0,36,1092	0/0:14,0:14:27.55:0,28,767	0/0:9,0:8:15.05:0,15,464	0/0:13,0:13:39.13:0,39,1182
chr10	15595567	.	G	GAA	1696	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-0.063;DP=461;FS=0.490;HRun=10;HaplotypeScore=57.3500;InbreedingCoeff=0.8880;MQ=61.54;MQ0=6;MQRankSum=0.817;QD=15.85;ReadPosRankSum=-1.315;VQSLOD=1.3487;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:32:58.13:0,58,733	0/0:8,0:8:6.79:0,7,88	0/0:11,0:2:3.01:0,3,31	0/0:14,0:9:17.60:0,18,147	1/1:12,13:26:44.64:545,45,0	1/1:4,17:22:45.15:654,45,0	1/1:4,16:20:5.60:462,6,0	0/0:28,0:29:74.88:0,75,736	0/0:13,0:13:39.09:0,39,397	0/0:11,0:14:7.67:0,8,195	0/0:13,0:14:23.73:0,24,276	0/0:7,0:7:18:0,18,167	0/0:13,0:13:30.95:0,31,307	0/0:8,0:9:23.79:0,24,225	0/0:12,0:12:33.07:0,33,336	0/0:23,0:23:38.97:0,39,573	0/0:26,0:26:63.07:0,63,623	0/0:21,0:22:53.82:0,54,531	1/1:9,0:18:27.05:94,27,0	1/1:1,0:8:18.41:83,18,0	1/1:5,0:9:9.98:35,10,0	0/0:10,0:10:27.03:0,27,267	0/0:7,0:7:15.01:0,15,152	0/0:17,0:17:45.08:0,45,458	0/0:12,0:12:27.01:0,27,274	0/0:28,0:28:66.11:0,66,666	0/0:24,0:24:48.04:0,48,484	0/0:8,0:8:15:0,15,153
chr10	15595985	.	A	ATGTG	4175.29	PASS	AB=0.863;AC=42;AF=0.808;AN=52;BaseQRankSum=-5.080;DP=542;FS=4.283;HRun=0;HaplotypeScore=123.7977;InbreedingCoeff=0.0856;MQ=59.52;MQ0=13;MQRankSum=-1.198;QD=8.98;ReadPosRankSum=-1.499;VQSLOD=2.3284;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:20,22:43:17.84:423,18,0	1/1:3,2:7:3.01:71,3,0	./.	./.	0/0:15,0:25:30.44:0,30,266	0/0:14,0:20:18.02:0,18,168	0/1:5,0:8:17.22:17,0,96	1/1:31,0:30:7.27:82,7,0	1/1:11,0:14:5.49:25,5,0	1/1:15,0:15:14.51:210,15,0	1/1:14,8:24:5.45:82,5,0	0/1:6,0:7:21.92:32,0,22	1/1:15,0:19:8.50:75,8,0	1/1:10,3:14:3.01:71,3,0	0/1:18,3:22:34.81:140,0,35	1/1:11,0:16:12.51:209,13,0	0/1:16,9:26:52.95:270,0,53	1/1:14,5:21:15.52:262,16,0	1/1:20,0:18:3.01:42,3,0	1/1:22,0:22:12.03:192,12,0	1/1:8,0:6:6.02:128,6,0	1/1:10,4:14:2.99:71,3,0	1/1:12,7:21:5.47:139,5,0	0/1:11,12:26:22.53:470,0,23	1/1:21,2:25:44.07:592,44,0	0/1:19,0:19:17.13:211,0,17	1/1:12,3:29:17.26:248,17,0	1/1:10,0:10:6.02:114,6,0
chr10	15596675	.	CT	C	1774.57	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.268;DP=613;FS=2.622;HRun=1;HaplotypeScore=56.4590;InbreedingCoeff=0.9931;MQ=61.63;MQ0=2;MQRankSum=2.531;QD=34.13;ReadPosRankSum=0.227;VQSLOD=3.3890;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:63.21:0,63,999	0/0:5,0:5:14.98:0,15,186	0/0:24,0:20:39.48:0,39,777	0/0:14,0:10:26.90:0,27,345	0/0:20,0:20:54.17:0,54,839	0/0:24,0:24:66.21:0,66,1025	0/0:16,0:16:45.15:0,45,720	0/0:31,0:31:87.29:0,87,1371	0/0:25,0:25:69.20:0,69,1055	0/0:29,0:28:84.29:0,84,1344	0/0:11,0:11:27.08:0,27,408	0/0:35,0:35:99:0,99,1564	0/0:19,0:19:54.18:0,54,863	0/0:22,0:22:66.22:0,66,1047	0/0:21,0:21:60.20:0,60,957	0/0:25,0:25:75.24:0,75,1175	0/0:45,0:45:99:0,129,2021	0/0:25,0:25:69.23:0,69,1095	1/1:0,18:18:48.16:670,48,0	1/1:1,12:13:30.10:418,30,0	1/1:1,20:21:60.20:829,60,0	0/0:12,0:12:30.10:0,30,461	0/0:14,0:14:42.14:0,42,664	0/0:36,0:36:99:0,108,1659	0/0:17,0:17:51.16:0,51,785	0/0:23,0:23:69.23:0,69,1075	0/0:34,0:34:99:0,99,1535	0/0:13,0:13:39.11:0,39,593
chr10	15596896	.	GA	G	827.83	PASS	AB=0.979;AC=9;AF=0.161;AN=56;BaseQRankSum=7.628;DP=611;FS=0.553;HRun=10;HaplotypeScore=59.4318;InbreedingCoeff=0.6156;MQ=64.42;MQ0=1;MQRankSum=-0.897;QD=9.10;ReadPosRankSum=0.406;VQSLOD=1.9945;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,108,1167	0/1:4,0:5:12.10:12,0,69	0/0:16,1:11:1:0,1,223	0/1:18,0:11:3.42:3,0,175	0/0:24,0:24:57.13:0,57,619	0/0:14,0:15:41.93:0,42,438	0/0:20,0:20:45.07:0,45,469	0/0:30,0:29:69.17:0,69,763	0/0:24,0:24:61.03:0,61,657	0/0:18,0:18:48.13:0,48,530	0/0:19,1:20:22.07:0,22,472	0/0:19,0:19:42.10:0,42,456	0/0:14,1:15:10.04:0,10,339	0/0:17,0:17:45.12:0,45,498	0/0:31,2:33:55.16:0,55,835	0/0:13,0:13:39.09:0,39,423	0/0:37,0:37:93.21:0,93,1006	0/0:23,0:23:66.16:0,66,721	1/1:0,14:14:35.99:313,36,0	1/1:6,13:19:35.97:312,36,0	1/1:3,17:17:11.81:331,12,0	0/0:22,0:22:54.13:0,54,582	0/0:14,0:14:30.08:0,30,331	0/0:37,1:38:79.21:0,79,1094	0/0:16,0:16:42.11:0,42,465	0/0:28,0:28:75.20:0,75,826	0/0:33,1:34:67.58:0,68,953	0/1:14,1:15:1.64:2,0,386
chr10	15598368	.	T	TAATC	12350.02	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-12.484;DP=621;FS=6.528;HRun=0;HaplotypeScore=99.5603;InbreedingCoeff=0.9942;MQ=74.11;MQ0=1;MQRankSum=-1.175;QD=38.84;ReadPosRankSum=1.227;VQSLOD=5.0351;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:10,22:33:51.18:1215,51,0	0/0:10,0:10:24.07:0,24,366	0/0:19,0:19:18.06:0,18,271	0/0:28,0:28:42.09:0,42,629	0/0:32,0:32:78.25:0,78,1223	0/0:24,0:24:57.19:0,57,905	0/0:18,0:18:39.13:0,39,634	0/0:21,0:21:39.12:0,39,580	0/0:25,0:25:57.18:0,57,891	0/0:28,0:28:72.24:0,72,1140	0/0:16,0:16:24.08:0,24,390	1/1:7,16:23:45.15:1073,45,0	1/1:6,12:18:36.12:863,36,0	1/1:8,12:22:33.11:793,33,0	1/1:13,26:40:66.23:1586,66,0	1/1:10,18:28:45.15:1059,45,0	0/0:17,0:17:42.14:0,42,683	1/1:3,7:10:18.06:437,18,0	1/1:14,5:19:24.54:489,25,0	1/1:4,20:25:57.19:1340,57,0	1/1:8,15:23:27.09:655,27,0	1/1:8,10:20:27.09:587,27,0	1/1:5,13:18:30.99:726,31,0	1/1:5,15:19:27.09:655,27,0	1/1:3,14:18:36.12:873,36,0	0/0:37,0:37:93.26:0,93,1462	0/0:21,0:21:54.18:0,54,878	0/0:7,0:7:15.03:0,15,218
chr10	15599424	.	C	CTTT	4880.16	PASS	AB=0.671;AC=37;AF=0.661;AN=56;BaseQRankSum=-2.157;DP=659;FS=9.732;HRun=12;HaplotypeScore=118.0829;InbreedingCoeff=0.5959;MQ=75.04;MQ0=0;MQRankSum=-1.853;QD=9.82;ReadPosRankSum=-1.198;VQSLOD=1.4861;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:37:29.85:67,30,0	1/1:3,3:8:12.04:206,12,0	0/1:17,0:21:0.11:0,0,157	0/0:26,0:24:22.43:0,22,154	0/0:4,0:13:23.44:0,23,142	0/0:1,0:10:26.47:0,26,160	0/0:7,0:28:49.92:0,50,302	1/1:13,7:25:38.88:555,39,0	1/1:9,16:26:21.07:385,21,0	1/1:6,17:26:47.76:663,48,0	1/1:4,17:24:47.97:697,48,0	1/1:3,0:22:3.71:59,4,0	0/1:4,0:19:11.55:12,0,19	1/1:2,0:20:12.03:47,12,0	0/1:9,0:34:13.98:14,0,73	0/1:9,0:30:36:36,0,41	1/1:9,21:31:10.02:601,10,0	0/1:15,0:35:76.10:168,0,76	0/0:26,0:28:34.80:0,35,566	0/0:31,0:33:40.87:0,41,649	0/0:22,0:23:37.38:0,37,434	1/1:5,0:15:12.96:45,13,0	1/1:3,0:17:15.09:50,15,0	1/1:2,0:23:11.19:73,11,0	1/1:3,0:18:12.46:28,12,0	1/1:13,16:33:56.98:704,57,0	1/1:6,15:22:20.73:336,21,0	1/1:2,4:7:9.01:133,9,0
chr10	15599948	.	TTTTTTTTC	T	1783.34	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.136;DP=445;FS=1.806;HRun=0;HaplotypeScore=109.1569;InbreedingCoeff=0.9420;MQ=62.30;MQ0=0;MQRankSum=-8.151;QD=42.46;ReadPosRankSum=-0.062;VQSLOD=2.9639;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:84.29:0,84,3405	0/0:5,0:5:12.04:0,12,499	0/0:10,0:7:16.33:0,16,634	0/0:10,0:8:14.98:0,15,534	0/0:16,0:16:48.16:0,48,1873	0/0:20,0:20:48.16:0,48,1996	0/0:12,0:12:33.11:0,33,1336	0/0:35,0:34:81.27:0,81,3182	0/0:11,0:11:33.11:0,33,1372	0/0:15,0:15:42.14:0,42,1720	0/0:4,0:3:9.03:0,9,374	0/0:16,0:16:45.15:0,45,1740	0/0:9,0:9:24.08:0,24,998	0/0:14,0:14:39.61:0,40,1585	0/0:21,0:21:53.88:0,54,2172	0/0:9,0:9:27.09:0,27,1105	0/0:34,0:34:84.26:0,84,3361	0/0:31,0:31:75.26:0,75,3091	1/1:7,13:19:39.13:999,39,0	1/1:1,11:12:33.03:731,33,0	1/1:5,5:10:10.84:191,11,0	0/0:7,0:7:21.07:0,21,860	0/0:11,0:11:30.10:0,30,1206	0/0:9,0:9:27.09:0,27,1098	0/0:19,0:19:57.20:0,57,2329	0/0:23,0:22:60.21:0,60,2471	0/0:16,0:16:48.16:0,48,1926	0/0:18,0:18:54.19:0,54,2183
chr10	15603541	.	C	CCT	6343.74	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-12.955;DP=632;FS=10.796;HRun=0;HaplotypeScore=72.6290;InbreedingCoeff=0.9996;MQ=72.15;MQ0=1;MQRankSum=-1.808;QD=48.06;ReadPosRankSum=0.665;VQSLOD=5.4218;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:75.26:0,75,1222	0/0:10,0:10:30.10:0,30,474	0/0:25,0:25:72.22:0,72,1124	0/0:18,0:18:50.38:0,50,734	1/1:0,16:17:42.14:827,42,0	1/1:0,23:26:60.21:1219,60,0	1/1:1,26:27:60.21:1195,60,0	0/0:25,0:25:63.16:0,63,968	0/0:15,0:15:42.12:0,42,630	0/0:26,0:26:72.21:0,72,1136	0/0:18,0:18:51.03:0,51,770	0/0:33,0:33:96.29:0,96,1530	0/0:22,0:22:60.18:0,60,952	0/0:21,0:21:57.18:0,57,900	0/0:32,0:32:90.29:0,90,1443	0/0:20,0:20:60.15:0,60,927	0/0:51,0:51:99:0,150,2419	0/0:25,0:25:66.22:0,66,1061	1/1:0,12:13:39.08:695,39,0	1/1:1,18:19:54.18:1067,54,0	1/1:2,26:29:66.23:1341,66,0	0/0:16,0:16:39.13:0,39,635	0/0:16,0:16:45.11:0,45,700	0/0:29,0:29:84.29:0,84,1369	0/0:13,0:13:39.13:0,39,635	0/0:22,0:22:57.19:0,57,929	0/0:27,0:26:78.19:0,78,1178	0/0:9,0:9:27.08:0,27,396
chr10	15604433	.	A	AT	1618.14	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-6.886;DP=542;FS=3.366;HRun=8;HaplotypeScore=53.6451;InbreedingCoeff=0.9921;MQ=73.05;MQ0=0;MQRankSum=-0.340;QD=26.53;ReadPosRankSum=-1.414;VQSLOD=3.9266;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:33:91.01:0,91,786	0/0:12,0:12:30.01:0,30,275	0/0:14,0:14:25.77:0,26,211	0/0:12,0:12:15.55:0,16,123	0/0:23,0:23:57.01:0,57,515	0/0:17,0:17:45:0,45,407	0/0:10,0:10:30.02:0,30,274	0/0:28,0:28:59.98:0,60,535	0/0:19,0:20:53.05:0,53,469	0/0:23,0:23:66.02:0,66,600	0/0:28,0:28:74.69:0,75,664	0/0:14,0:14:42:0,42,377	0/0:19,0:19:54.03:0,54,494	0/0:14,0:14:36:0,36,325	0/0:25,0:25:72.02:0,72,655	0/0:20,0:20:57.02:0,57,517	0/0:26,0:26:68.98:0,69,615	0/0:16,0:16:41.96:0,42,372	1/1:2,19:21:57.12:634,57,0	1/1:2,26:28:78.18:884,78,0	1/1:3,9:12:21.06:242,21,0	0/0:12,0:12:36.02:0,36,329	0/0:18,0:18:50.97:0,51,450	0/0:12,0:12:36:0,36,324	0/0:26,0:26:69.02:0,69,628	0/0:23,0:24:71.05:0,71,629	0/0:25,0:25:69.02:0,69,627	0/0:10,0:10:27:0,27,242
chr10	15604708	.	GT	G	2739.02	PASS	AB=0.954;AC=14;AF=0.250;AN=56;BaseQRankSum=14.976;DP=634;FS=5.444;HRun=9;HaplotypeScore=77.8083;InbreedingCoeff=0.8096;MQ=64.95;MQ0=7;MQRankSum=1.392;QD=13.36;ReadPosRankSum=0.900;VQSLOD=3.5854;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:75.15:0,75,837	0/0:10,0:10:30.09:0,30,346	0/1:36,2:19:19.80:20,0,246	0/1:47,1:22:33.09:33,0,193	1/1:1,23:24:60.02:549,60,0	1/1:2,26:28:72.01:659,72,0	1/1:1,10:11:30:274,30,0	0/0:16,0:16:36.11:0,36,416	0/0:17,1:18:23.69:0,24,527	0/0:37,1:38:72.29:0,72,1073	0/0:21,0:21:60.18:0,60,691	0/0:14,0:14:36.11:0,36,415	0/0:21,0:21:63.17:0,63,709	0/0:24,0:24:72.20:0,72,821	0/0:16,0:16:48.14:0,48,554	0/0:23,0:23:53.28:0,53,699	0/0:30,0:30:75.12:0,75,825	0/0:14,0:14:36.09:0,36,405	1/1:2,10:12:30.01:274,30,0	1/1:2,29:31:87.03:794,87,0	1/1:0,12:12:36.02:329,36,0	0/0:15,0:15:42.12:0,42,485	0/0:30,0:30:87.24:0,87,987	0/0:12,0:12:30.09:0,30,346	0/0:16,0:16:39.12:0,39,450	0/0:31,0:33:92.94:0,93,1032	0/0:23,0:23:63.19:0,63,727	0/0:28,0:28:78.23:0,78,899
chr10	15605690	.	C	CT	2411.83	PASS	AB=0.923;AC=13;AF=0.232;AN=56;BaseQRankSum=2.250;DP=625;FS=3.279;HRun=9;HaplotypeScore=62.6369;InbreedingCoeff=0.8564;MQ=60.46;MQ0=16;MQRankSum=-0.102;QD=15.66;ReadPosRankSum=0.807;VQSLOD=3.9003;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,107,985	0/0:8,0:9:26.03:0,26,214	0/0:44,0:11:17.20:0,17,127	0/0:47,0:10:2.98:0,3,26	1/1:9,20:27:54.01:577,54,0	1/1:4,15:18:7.03:305,7,0	1/1:6,19:21:36.10:398,36,0	0/0:35,0:35:79.50:0,79,677	0/0:19,0:19:44.87:0,45,380	0/0:21,0:21:56.98:0,57,493	0/1:11,1:12:6.20:6,0,181	0/0:16,0:16:44.89:0,45,380	0/0:14,0:14:38.99:0,39,338	0/0:14,0:14:38.98:0,39,338	0/0:27,0:27:71.89:0,72,615	0/0:15,0:15:14.51:0,15,265	0/0:26,0:26:77.96:0,78,672	0/0:16,0:16:41.02:0,41,344	1/1:5,23:27:63.16:685,63,0	1/1:3,20:23:13.01:357,13,0	1/1:4,14:17:24.06:266,24,0	0/0:16,0:17:46.99:0,47,388	0/0:12,0:12:23.66:0,24,194	0/0:26,0:26:67.97:0,68,636	0/0:14,0:14:41.99:0,42,364	0/0:21,0:21:53.93:0,54,466	0/0:24,0:24:65.87:0,66,559	0/0:7,0:7:17.99:0,18,156
chr10	15607550	.	TGG	T	2296.80	PASS	AB=0.682;AC=24;AF=0.429;AN=56;BaseQRankSum=-7.034;DP=339;FS=3.677;HRun=11;HaplotypeScore=51.5530;InbreedingCoeff=0.4877;MQ=53.70;MQ0=4;MQRankSum=-0.327;QD=10.73;ReadPosRankSum=-0.266;VQSLOD=0.9184;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:10,3:25:50.60:90,0,51	1/1:0,1:1:3.01:32,3,0	0/0:6,0:1:3:0,3,29	0/0:6,0:6:6.11:0,6,65	0/1:6,0:6:0:0,0,0	0/0:14,0:14:15.05:0,15,231	0/0:11,0:11:26.53:0,27,352	1/1:9,8:13:16.80:170,17,0	1/1:3,10:12:27.06:287,27,0	1/1:4,7:11:24.05:255,24,0	1/1:4,2:6:6.01:64,6,0	0/1:8,3:14:31.60:104,0,32	0/1:1,2:5:15.20:21,0,15	0/0:2,0:12:23.44:0,23,125	0/0:8,0:13:12.87:0,13,80	0/0:0,0:5:9.98:0,10,34	1/1:5,27:32:71.22:704,71,0	0/0:5,0:12:19.80:0,20,68	0/0:1,0:4:7.49:0,7,26	0/0:3,0:8:7.21:0,7,24	0/1:12,3:31:1.59:2,0,64	0/0:7,0:12:12.73:0,13,46	0/0:4,0:6:4.99:0,5,17	0/1:5,1:11:16.45:16,0,27	0/0:5,0:5:0:0,0,0	1/1:4,9:13:30.03:307,30,0	1/1:6,8:13:27:269,27,0	1/1:0,7:7:15.04:160,15,0
chr10	15607560	.	GGT	G	533.04	PASS	AB=0.974;AC=15;AF=0.268;AN=56;BaseQRankSum=5.094;DP=329;FS=16.668;HRun=0;HaplotypeScore=52.8392;InbreedingCoeff=0.1363;MQ=53.48;MQ0=7;MQRankSum=1.064;QD=3.31;ReadPosRankSum=4.709;VQSLOD=0.0086;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:29,1:28:1.94:2,0,250	1/1:1,0:1:2.80:13,3,0	0/0:8,0:1:2.88:0,3,15	0/0:7,0:4:7.36:0,7,66	0/1:4,0:4:3.03:3,0,20	0/0:11,0:10:17.40:0,17,304	0/0:16,0:14:41.94:0,42,523	0/1:20,0:15:7.15:7,0,149	0/1:14,0:13:53.52:58,0,54	0/1:9,1:10:24.10:55,0,24	0/1:3,0:3:15.29:18,0,15	0/1:14,2:15:31.85:32,0,172	0/0:5,1:6:4.98:0,5,52	0/0:15,0:15:34.26:0,34,255	0/0:8,0:7:16.60:0,17,135	0/0:8,0:7:16.58:0,17,106	0/1:33,0:31:26.70:196,0,27	0/0:16,1:13:27.57:0,28,179	0/0:11,0:6:17.78:0,18,133	0/0:6,0:6:11.64:0,12,66	0/0:30,1:31:50.70:0,51,383	0/0:9,0:8:3.94:0,4,27	0/0:2,0:2:5.83:0,6,33	0/0:12,0:10:12.30:0,12,122	0/0:1,0:1:2.99:0,3,24	1/1:9,1:10:25.38:111,25,0	1/1:9,1:10:24.07:159,24,0	0/1:9,0:9:3.03:36,0,3
chr10	15607929	.	ATGTG	A	284.61	PASS	AB=0.900;AC=13;AF=0.406;AN=32;BaseQRankSum=0.120;DP=348;FS=1.480;HRun=0;HaplotypeScore=51.8440;InbreedingCoeff=0.3778;MQ=47.43;MQ0=30;MQRankSum=2.069;QD=3.23;ReadPosRankSum=1.693;VQSLOD=0.7308;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:17:6.02:81,6,0	./.	./.	./.	./.	./.	1/1:17,0:12:0.47:1,0,0	0/0:26,0:21:0:0,0,0	0/0:6,0:6:2.73:0,3,63	0/0:10,0:10:11.94:0,12,162	0/0:7,0:7:0:0,0,0	./.	1/1:8,0:6:3.01:44,3,0	./.	1/1:2,2:3:0.47:1,0,0	1/1:6,5:10:0.94:1,1,0	0/0:26,0:23:10.37:0,10,164	0/1:16,1:17:20.91:209,0,21	0/0:8,0:3:5.97:0,6,71	./.	./.	1/1:8,3:10:3.01:46,3,0	./.	./.	./.	0/0:18,0:17:0.12:0,0,158	0/0:18,0:16:12.94:0,13,155	0/0:15,0:15:18.06:0,18,386
chr10	15607984	.	CATAT	C	768.58	PASS	AB=1.000;AC=18;AF=0.474;AN=38;BaseQRankSum=-3.548;DP=191;FS=2.636;HRun=0;HaplotypeScore=29.0967;InbreedingCoeff=0.4453;MQ=45.32;MQ0=31;MQRankSum=-0.813;QD=8.01;ReadPosRankSum=1.923;VQSLOD=1.5282;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:12:11.50:0,12,159	./.	./.	0/0:3,0:1:2.97:0,3,20	./.	./.	0/1:8,0:2:0:0,0,0	1/1:6,11:11:13.81:321,14,0	1/1:0,3:3:3.01:51,3,0	1/1:4,4:6:12:144,12,0	1/1:2,4:6:2.84:50,3,0	0/0:4,0:3:0.47:0,0,1	0/0:3,0:1:3.01:0,3,48	0/0:3,0:2:3.01:0,3,53	0/0:3,0:2:3.01:0,3,53	0/0:7,0:6:3:0,3,25	1/1:7,15:18:2.54:50,3,0	0/0:7,0:21:14.40:0,14,175	0/1:4,0:4:6.38:6,0,20	./.	./.	./.	./.	./.	0/0:3,0:3:6:0,6,76	1/1:9,0:9:6.02:78,6,0	1/1:3,9:12:2.08:48,2,0	1/1:7,0:7:9.03:147,9,0
chr10	15610401	.	CT	C	714.79	PASS	AB=0.720;AC=4;AF=0.071;AN=56;BaseQRankSum=4.187;DP=593;FS=2.086;HRun=5;HaplotypeScore=104.3122;InbreedingCoeff=0.2219;MQ=66.68;MQ0=21;MQRankSum=-1.488;QD=12.12;ReadPosRankSum=0.308;VQSLOD=1.8847;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:35:58.21:0,58,753	0/0:12,0:12:26.31:0,26,263	0/0:44,0:21:34.24:0,34,334	0/0:55,0:27:3.93:0,4,207	0/1:19,11:27:41.50:313,0,42	1/1:8,4:12:1.64:259,2,0	0/1:10,7:15:21.81:244,0,22	0/0:19,0:19:26.54:0,27,340	0/0:7,0:5:7.98:0,8,52	0/0:24,0:24:46.24:0,46,546	0/0:19,1:19:27.40:0,27,384	0/0:11,0:10:21.64:0,22,209	0/0:16,0:14:21.41:0,21,204	0/0:22,0:21:33.61:0,34,374	0/0:17,0:14:17.05:0,17,262	0/0:23,0:19:42.14:0,42,558	0/0:24,0:22:25.69:0,26,226	0/0:15,0:15:21.99:0,22,429	0/0:20,0:21:21.86:0,22,383	0/0:24,0:23:66.14:0,66,843	0/0:14,0:13:15:0,15,347	0/0:13,0:13:21.53:0,22,263	0/0:10,0:9:17.92:0,18,254	0/0:12,0:11:8.40:0,8,168	0/0:25,0:21:29.58:0,30,384	0/0:40,0:38:83.13:0,83,930	0/0:19,0:19:31.70:0,32,351	0/0:9,0:8:24.07:0,24,297
chr10	15610440	.	C	CT	445.27	PASS	AC=6;AF=0.115;AN=52;BaseQRankSum=1.275;DP=489;FS=2.061;HRun=7;HaplotypeScore=69.5461;InbreedingCoeff=0.8547;MQ=38.85;MQ0=69;MQRankSum=-2.970;QD=8.40;ReadPosRankSum=1.250;VQSLOD=0.7354;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:24:23.68:0,24,223	0/0:7,0:7:9.01:0,9,87	./.	./.	1/1:12,8:16:15.05:181,15,0	1/1:9,8:13:18.06:217,18,0	1/1:10,6:11:15.05:181,15,0	0/0:17,0:15:29.59:0,30,277	0/0:15,0:10:20.79:0,21,197	0/0:12,0:11:23.97:0,24,222	0/0:13,0:12:5.99:0,6,58	0/0:12,0:12:22.22:0,22,253	0/0:16,0:14:26.61:0,27,260	0/0:14,0:13:20.54:0,21,196	0/0:20,0:16:32.70:0,33,318	0/0:21,0:18:20.95:0,21,197	0/0:33,0:26:25.82:0,26,259	0/0:31,0:15:26.47:0,26,254	0/0:16,0:11:24.03:0,24,232	0/0:17,0:17:21:0,21,201	0/0:11,0:7:11.69:0,12,115	0/0:9,0:5:6:0,6,58	0/0:16,0:14:29.97:0,30,275	0/0:17,0:13:8.84:0,9,111	0/0:21,0:18:23.97:0,24,227	0/0:40,0:35:60.02:0,60,575	0/0:24,0:23:39.03:0,39,376	0/0:20,0:15:18.31:0,18,150
chr10	15610676	.	G	GT	682.69	PASS	AB=0.765;AC=11;AF=0.196;AN=56;BaseQRankSum=3.511;DP=554;FS=11.569;HRun=12;HaplotypeScore=82.4071;InbreedingCoeff=0.5768;MQ=73.94;MQ0=2;MQRankSum=0.553;QD=5.51;ReadPosRankSum=-3.045;VQSLOD=0.4220;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:32:21.62:0,22,397	0/0:5,0:5:8.92:0,9,66	0/0:36,0:23:8.03:0,8,122	0/1:20,0:17:28.25:28,0,33	1/1:19,1:19:14.78:87,15,0	1/1:9,0:14:30.80:147,31,0	1/1:18,0:18:17.05:77,17,0	0/0:27,0:27:45.95:0,46,302	0/0:18,0:18:1.47:0,1,179	0/0:14,0:16:27.83:0,28,183	0/0:15,0:15:32.75:0,33,239	0/0:22,1:25:28.55:0,29,353	0/0:17,0:17:35.68:0,36,257	0/0:17,0:17:38.69:0,39,283	0/0:18,0:18:28.79:0,29,202	0/0:26,1:27:6.93:0,7,341	0/0:25,0:27:47.87:0,48,326	0/0:25,0:26:46.32:0,46,332	0/1:10,9:19:6.62:211,0,7	1/1:6,9:16:4.89:179,5,0	0/1:6,9:16:3.16:114,0,3	0/0:10,0:10:26.80:0,27,196	0/0:14,1:18:1.51:0,2,156	0/0:13,0:13:29.82:0,30,219	0/0:21,0:22:30.48:0,30,329	0/0:13,0:13:11.89:0,12,87	0/0:34,1:37:56.63:0,57,553	0/0:10,0:11:31.87:0,32,224
chr10	15610690	.	T	TTTA	518.03	PASS	AB=0.601;AC=3;AF=0.054;AN=56;BaseQRankSum=6.817;DP=591;FS=4.758;HRun=0;HaplotypeScore=103.4309;InbreedingCoeff=0.2548;MQ=81.28;MQ0=3;MQRankSum=-1.587;QD=8.49;ReadPosRankSum=-0.172;VQSLOD=2.4412;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:96.27:0,96,1529	0/0:8,0:8:24.04:0,24,356	0/0:43,0:26:33.57:0,34,446	0/0:28,0:22:26.74:0,27,310	0/1:6,0:20:54.84:113,0,55	0/1:7,1:17:1.27:290,0,1	0/1:7,13:22:9.12:215,0,9	0/0:27,0:27:69.14:0,69,893	0/0:15,0:15:42.13:0,42,672	0/0:18,0:18:51.16:0,51,821	0/0:16,0:16:45.13:0,45,681	0/0:22,0:22:60.15:0,60,930	0/0:13,0:13:39.12:0,39,611	0/0:20,0:20:57.07:0,57,834	0/0:22,0:22:57.19:0,57,925	0/0:27,0:27:75.22:0,75,1225	0/0:22,0:22:66.11:0,66,957	0/0:26,0:26:63.12:0,63,964	0/0:20,0:20:26.51:0,27,567	0/0:15,0:15:35.32:0,35,548	0/0:13,0:13:24.19:0,24,374	0/0:10,0:10:27.08:0,27,430	0/0:18,0:18:44.93:0,45,694	0/0:12,0:12:36.10:0,36,561	0/0:27,0:27:75.25:0,75,1232	0/0:12,0:12:36.12:0,36,596	0/0:38,0:38:99:0,105,1548	0/0:26,0:26:66.12:0,66,974
chr10	15612671	.	ATGTGTGTGTG	A	2584.59	PASS	AB=0.801;AC=34;AF=0.739;AN=46;BaseQRankSum=4.276;DP=605;FS=9.305;HRun=0;HaplotypeScore=175.7255;InbreedingCoeff=0.2605;MQ=64.20;MQ0=10;MQRankSum=-3.477;QD=6.77;ReadPosRankSum=3.040;VQSLOD=1.9443;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:24,3:26:15.89:194,16,0	./.	./.	./.	0/1:9,0:16:0:0,0,0	1/1:20,0:23:6.02:139,6,0	./.	0/0:36,0:35:0.83:0,1,2	1/1:15,0:19:9.03:209,9,0	1/1:15,0:21:3.01:70,3,0	1/1:6,0:8:3.01:70,3,0	1/1:3,2:5:3.01:88,3,0	1/1:11,4:15:3.01:88,3,0	1/1:24,2:27:12.04:265,12,0	1/1:18,6:25:12.03:294,12,0	1/1:13,4:18:12.04:333,12,0	1/1:25,0:33:5.23:138,5,0	0/1:17,4:21:66.75:130,0,67	./.	0/0:6,0:6:3:0,3,25	0/0:62,0:63:44.89:0,45,1621	1/1:12,0:11:6.01:80,6,0	1/1:16,4:20:9.03:224,9,0	0/1:33,1:34:75.59:227,0,76	0/1:8,0:13:21.77:22,0,22	1/1:19,0:19:1.69:4,2,0	1/1:16,0:20:6.02:140,6,0	0/0:15,0:14:5.22:0,5,92
chr10	15613578	.	CTT	C	446.74	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=1.935;DP=519;FS=0.000;HRun=15;HaplotypeScore=68.2062;InbreedingCoeff=0.7903;MQ=64.73;MQ0=8;MQRankSum=1.903;QD=11.17;ReadPosRankSum=0.640;VQSLOD=2.3406;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:35:76.37:0,76,800	0/0:4,0:5:14.54:0,15,172	0/0:26,0:9:11.80:0,12,76	0/0:20,1:10:2.06:0,2,62	0/0:24,0:22:29.99:0,30,330	0/0:13,0:13:26.52:0,27,311	0/0:9,0:11:32.03:0,32,353	0/0:23,0:25:44.07:0,44,495	0/0:13,0:12:24.75:0,25,297	0/0:17,0:18:32.48:0,32,302	0/0:18,0:19:22.89:0,23,454	0/0:13,0:13:23.55:0,24,329	0/0:16,0:18:34.79:0,35,361	0/0:10,0:11:25.66:0,26,270	0/0:16,0:15:38.83:0,39,448	0/0:8,0:8:20.96:0,21,222	0/0:28,0:30:47.44:0,47,707	0/0:19,0:22:56.45:0,56,562	1/1:8,11:22:6.88:256,7,0	1/1:3,12:15:29.21:288,29,0	1/1:3,0:2:2.81:26,3,0	0/0:13,0:13:29.19:0,29,310	0/0:14,0:15:8.76:0,9,306	0/0:23,1:27:42.76:0,43,793	0/0:16,0:17:41.31:0,41,478	0/0:23,0:23:40.26:0,40,464	0/0:16,0:19:38.58:0,39,454	0/0:26,0:29:47.07:0,47,551
chr10	15615554	.	G	GGA	2843.91	PASS	AB=0.627;AC=9;AF=0.161;AN=56;BaseQRankSum=-5.015;DP=753;FS=10.116;HRun=0;HaplotypeScore=102.4633;InbreedingCoeff=0.5233;MQ=73.15;MQ0=4;MQRankSum=0.074;QD=18.83;ReadPosRankSum=0.340;VQSLOD=3.2931;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:54:99:0,126,1452	0/0:6,0:9:17.89:0,18,192	0/0:34,0:26:26.34:0,26,263	0/0:31,0:23:4.47:0,4,103	1/1:13,16:30:3.61:529,4,0	0/1:9,16:26:25.95:573,0,26	0/1:13,11:25:44.01:306,0,44	0/0:26,0:28:50.73:0,51,557	0/0:23,0:24:54:0,54,618	0/0:27,0:29:56.80:0,57,588	0/0:19,0:19:42.13:0,42,492	0/0:21,0:21:50.99:0,51,583	0/0:25,0:25:56.84:0,57,648	0/0:22,0:22:60.18:0,60,710	0/0:33,0:36:86.75:0,87,954	0/0:31,0:31:78.06:0,78,893	0/0:41,1:44:57.49:0,57,1091	0/0:23,0:26:62.60:0,63,640	1/1:8,9:18:27.94:364,28,0	0/1:8,15:22:35.02:396,0,35	1/1:12,15:28:54.17:827,54,0	0/0:31,0:31:51.36:0,51,678	0/0:21,0:23:56.81:0,57,618	0/0:23,0:28:53.66:0,54,575	0/0:19,0:19:42.11:0,42,497	0/0:25,0:28:59.92:0,60,644	0/0:27,0:28:69.04:0,69,795	0/0:9,0:9:18.05:0,18,213
chr10	15616211	.	CTTT	C	609.20	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=0.847;DP=500;FS=1.631;HRun=15;HaplotypeScore=81.8401;InbreedingCoeff=0.8165;MQ=68.15;MQ0=22;MQRankSum=-0.461;QD=6.62;ReadPosRankSum=2.674;VQSLOD=-0.4518;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:31:60.96:0,61,876	0/0:7,0:7:17.98:0,18,241	0/1:47,0:13:4.13:4,0,175	0/0:66,0:24:35.57:0,36,287	0/0:14,0:16:36.51:0,37,492	0/0:13,0:12:33.10:0,33,549	0/0:12,0:13:38.46:0,38,474	0/0:33,0:36:81.06:0,81,1089	0/0:5,0:5:9:0,9,105	0/0:14,0:17:39.07:0,39,555	0/0:17,0:18:45.06:0,45,696	0/0:12,0:12:30.09:0,30,471	0/0:6,0:6:15:0,15,217	0/0:14,0:13:32.08:0,32,463	0/0:11,0:11:27.09:0,27,483	0/0:7,0:7:21.06:0,21,332	0/0:14,0:18:39.05:0,39,569	0/0:14,0:15:32.92:0,33,512	1/1:6,13:17:34.73:369,35,0	1/1:7,10:16:23.44:290,23,0	1/1:4,4:8:8.93:85,9,0	0/0:7,0:7:15.04:0,15,217	0/0:10,0:11:30.22:0,30,402	0/0:8,0:8:11.98:0,12,155	0/0:13,0:14:36.03:0,36,502	0/0:19,0:21:51.11:0,51,786	0/0:24,0:27:69.15:0,69,1025	0/0:9,0:13:24.08:0,24,403
chr10	15617089	.	C	CTT	4944.73	PASS	AB=0.846;AC=31;AF=0.554;AN=56;BaseQRankSum=0.205;DP=550;FS=1.939;HRun=14;HaplotypeScore=85.3014;InbreedingCoeff=0.7859;MQ=74.96;MQ0=1;MQRankSum=0.943;QD=14.98;ReadPosRankSum=-3.871;VQSLOD=3.2123;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:29:30.89:0,31,361	0/1:6,2:9:9.08:123,0,9	0/0:23,0:14:16.94:0,17,110	0/0:19,0:14:10.08:0,10,58	1/1:9,13:25:50.30:453,50,0	1/1:4,12:19:28.18:300,28,0	1/1:3,10:15:23.44:283,23,0	1/1:12,14:30:29.46:490,29,0	1/1:2,15:18:27.02:322,27,0	1/1:9,4:17:22.16:209,22,0	1/1:3,11:18:39.30:381,39,0	0/1:15,1:18:15.61:16,0,193	0/0:12,0:13:20.83:0,21,214	0/0:12,0:14:14.68:0,15,167	0/0:23,0:23:14.68:0,15,314	0/0:12,0:14:20.55:0,21,159	1/1:4,11:16:26.44:312,26,0	0/0:20,0:21:29.32:0,29,233	1/1:11,6:23:30.07:330,30,0	1/1:4,11:21:48:492,48,0	1/1:9,2:17:12.50:137,13,0	0/0:18,0:18:32.49:0,32,262	0/0:18,0:20:36.87:0,37,306	0/1:14,2:16:6.63:7,0,206	0/0:18,0:21:23.39:0,23,266	1/1:5,13:23:40.15:406,40,0	1/1:8,17:30:36.10:435,36,0	1/1:4,7:14:22.25:249,22,0
chr10	15623093	.	CT	C	2152.79	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=10.716;DP=802;FS=2.038;HRun=7;HaplotypeScore=76.5946;InbreedingCoeff=0.9996;MQ=79.15;MQ0=0;MQRankSum=-1.427;QD=24.74;ReadPosRankSum=1.117;VQSLOD=4.1644;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,102,1247	0/0:18,0:18:54.16:0,54,664	0/0:28,0:28:62.91:0,63,730	0/0:14,0:14:39.12:0,39,472	1/1:2,41:43:99:1163,114,0	1/1:2,20:22:51.12:520,51,0	1/1:1,21:22:60.14:612,60,0	0/0:32,0:32:81.24:0,81,988	0/0:26,0:26:66.18:0,66,803	0/0:41,0:41:99:0,117,1468	0/0:25,0:25:69.22:0,69,868	0/0:29,0:29:75.24:0,75,943	0/0:21,0:21:57.17:0,57,704	0/0:25,0:25:75.23:0,75,932	0/0:24,0:24:63.20:0,63,792	0/0:28,0:28:75.24:0,75,944	0/0:37,0:37:99:0,108,1352	0/0:26,0:26:75.22:0,75,930	0/0:34,0:34:93.27:0,93,1134	0/0:46,0:46:99:0,135,1685	0/0:20,0:20:57.17:0,57,703	0/0:30,0:30:87.28:0,87,1094	0/0:31,0:31:93.30:0,93,1170	0/0:25,0:25:66.21:0,66,830	0/0:41,0:41:99:0,117,1472	0/0:39,0:39:99:0,111,1385	0/0:29,0:28:84.27:0,84,1054	0/0:9,0:9:27.07:0,27,327
chr10	15625500	.	TG	T	703.29	PASS	AB=0.966;AC=13;AF=0.232;AN=56;BaseQRankSum=5.099;DP=377;FS=0.886;HRun=1;HaplotypeScore=41.7562;InbreedingCoeff=0.8605;MQ=66.38;MQ0=11;MQRankSum=-3.686;QD=8.58;ReadPosRankSum=-2.422;VQSLOD=0.0184;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:80.83:0,81,849	0/0:5,0:5:15.03:0,15,175	0/1:27,1:13:16.08:16,0,79	0/0:19,0:8:16.57:0,17,124	1/1:9,7:15:22.43:269,22,0	1/1:0,6:6:9.03:125,9,0	1/1:4,2:6:15.87:157,16,0	0/0:18,0:18:13.21:0,13,496	0/0:10,0:10:26.96:0,27,278	0/0:18,0:18:48.11:0,48,568	0/0:12,0:12:30.02:0,30,332	0/0:14,0:14:38.81:0,39,427	0/0:7,0:7:21.05:0,21,247	0/0:14,0:14:38.93:0,39,475	0/0:9,0:9:26.95:0,27,272	0/0:7,0:7:21.04:0,21,238	0/0:20,0:18:48.03:0,48,534	0/0:18,0:15:39.25:0,39,503	1/1:11,0:11:28.84:188,29,0	1/1:7,0:7:11.98:67,12,0	1/1:8,0:8:11.68:65,12,0	0/0:7,0:7:21.04:0,21,238	0/0:8,0:7:20.26:0,20,216	0/0:19,0:19:48.14:0,48,583	0/0:10,0:10:25.32:0,25,305	0/0:15,0:14:38.52:0,39,402	0/0:14,0:14:42.03:0,42,507	0/0:21,0:20:50.13:0,50,581
chr10	15625949	.	C	CT	2868.44	PASS	AB=1.000;AC=14;AF=0.250;AN=56;BaseQRankSum=5.698;DP=749;FS=0.000;HRun=2;HaplotypeScore=92.4706;InbreedingCoeff=0.7718;MQ=61.18;MQ0=20;MQRankSum=-5.152;QD=13.53;ReadPosRankSum=-3.595;VQSLOD=1.5492;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:45:69.06:0,69,924	0/0:7,0:6:18.06:0,18,250	0/1:60,0:34:99:413,0,182	0/1:65,0:25:99:265,0,144	1/1:1,13:14:11.68:163,12,0	1/1:0,15:15:39.13:622,39,0	1/1:3,15:14:33.11:515,33,0	0/0:30,0:13:39.13:0,39,542	0/0:27,0:26:42.14:0,42,570	0/0:17,0:16:24.86:0,25,500	0/0:13,0:12:20.90:0,21,265	0/0:19,0:17:18.06:0,18,248	0/0:39,0:36:63.21:0,63,874	0/0:25,0:23:45.15:0,45,617	0/0:38,0:29:23.92:0,24,335	0/0:28,0:26:38.96:0,39,495	0/0:33,1:28:39.13:0,39,545	0/0:43,0:39:67.42:0,67,811	1/1:2,7:4:12.04:192,12,0	1/1:4,13:15:26.89:430,27,0	1/1:1,13:13:30.10:457,30,0	0/0:17,0:17:35.95:0,36,474	0/0:13,0:11:23.54:0,24,292	0/0:40,0:40:39.58:0,40,1045	0/0:11,0:10:15.05:0,15,210	0/0:39,0:32:84.11:0,84,1130	0/0:39,0:36:56.80:0,57,791	0/0:6,0:3:5.85:0,6,56
chr10	15627756	.	A	AC	2534.72	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-10.550;DP=700;FS=0.000;HRun=2;HaplotypeScore=63.9155;InbreedingCoeff=0.9887;MQ=91.34;MQ0=0;MQRankSum=-1.751;QD=37.28;ReadPosRankSum=0.278;VQSLOD=4.0208;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,111,1376	0/0:9,0:9:27.08:0,27,335	0/0:30,0:30:84.22:0,84,1017	0/0:25,0:25:54.03:0,54,739	1/1:0,23:23:60.20:863,60,0	1/1:2,27:29:81.27:1166,81,0	1/1:1,15:16:45.15:648,45,0	0/0:29,0:29:87.27:0,87,1069	0/0:16,0:16:45.14:0,45,558	0/0:30,0:30:87.27:0,87,1078	0/0:20,0:20:60.19:0,60,744	0/0:23,0:23:69.21:0,69,843	0/0:21,0:21:60.18:0,60,731	0/0:15,0:15:42.13:0,42,521	0/0:30,0:30:87.27:0,87,1079	0/0:35,0:35:99:0,105,1278	0/0:25,0:25:72.21:0,72,879	0/0:27,0:27:81.21:0,81,985	0/0:25,0:25:69.16:0,69,824	0/0:28,0:28:75.21:0,75,905	0/0:54,0:54:99:0,153,1882	0/0:29,0:29:84.26:0,84,1040	0/0:27,0:27:78.24:0,78,967	0/0:18,0:18:51.16:0,51,631	0/0:17,0:17:48.15:0,48,594	0/0:26,0:26:75.23:0,75,919	0/0:32,0:32:93.29:0,93,1146	0/0:4,0:4:12.04:0,12,148
chr10	15629915	.	G	GA	13103.11	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-12.597;DP=631;FS=9.453;HRun=8;HaplotypeScore=58.8918;InbreedingCoeff=0.9960;MQ=76.18;MQ0=0;MQRankSum=-2.182;QD=28.61;ReadPosRankSum=1.894;VQSLOD=5.0002;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,31:38:93.28:1073,93,0	1/1:2,10:12:27.08:312,27,0	0/0:24,0:25:26.60:0,27,336	0/0:11,0:10:18.39:0,18,160	0/0:31,0:31:81.04:0,81,741	0/0:13,0:13:36:0,36,324	0/0:25,0:25:66.01:0,66,599	1/1:2,23:25:69.20:796,69,0	1/1:6,16:22:45.13:519,45,0	1/1:5,15:20:15.87:454,16,0	1/1:1,21:22:60.14:677,60,0	1/1:2,21:23:54.16:623,54,0	1/1:5,19:24:57.13:638,57,0	1/1:1,14:15:39.12:450,39,0	1/1:4,31:35:87.26:1004,87,0	1/1:1,18:19:48.14:554,48,0	1/1:2,28:30:84.25:969,84,0	1/1:2,17:19:45.13:519,45,0	0/0:19,0:19:45.01:0,45,412	0/0:26,0:26:69.03:0,69,632	0/0:23,0:23:57.03:0,57,522	1/1:3,26:29:78.23:900,78,0	1/1:4,16:20:45.13:519,45,0	1/1:0,20:20:48.14:554,48,0	1/1:2,19:21:51.15:589,51,0	1/1:1,21:22:63.17:716,63,0	1/1:3,28:30:78.22:890,78,0	1/1:0,11:11:30.09:346,30,0
chr10	15630156	.	TGTC	T	515.44	PASS	AB=0.730;AC=3;AF=0.054;AN=56;BaseQRankSum=9.191;DP=748;FS=18.948;HRun=0;HaplotypeScore=171.9226;InbreedingCoeff=-0.0569;MQ=57.69;MQ0=14;MQRankSum=-5.099;QD=7.58;ReadPosRankSum=2.307;VQSLOD=1.9971;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:60.91:0,61,1668	0/0:18,0:18:53.38:0,53,830	0/0:26,0:16:45.15:0,45,943	0/0:23,0:21:60.09:0,60,982	0/1:14,7:21:85.02:145,0,85	0/1:11,8:19:57.93:199,0,58	0/1:18,10:28:88.71:272,0,89	0/0:33,0:32:91.49:0,91,985	0/0:26,0:26:77.20:0,77,1468	0/0:32,0:32:95.35:0,95,1793	0/0:21,0:21:62.21:0,62,1036	0/0:31,0:31:88.08:0,88,1329	0/0:33,0:33:97.02:0,97,1290	0/0:25,0:25:74.89:0,75,1327	0/0:33,0:33:97.95:0,98,1838	0/0:26,0:26:73.70:0,74,1117	0/0:33,0:33:98.58:0,99,1724	0/0:20,0:19:56.28:0,56,944	0/0:28,0:17:49.15:0,49,858	0/0:23,0:23:67.50:0,67,1032	0/0:38,0:38:99:0,113,1800	0/0:25,0:25:60.94:0,61,980	0/0:18,0:17:47.89:0,48,869	0/0:32,0:31:86.06:0,86,1508	0/0:19,0:19:53.85:0,54,1121	0/0:33,0:33:91.97:0,92,1735	0/0:43,0:43:99:0,125,2241	0/0:6,0:6:17.58:0,18,214
chr10	15630375	.	TAGAA	T	844.86	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=4.396;DP=619;FS=8.183;HRun=0;HaplotypeScore=144.7637;InbreedingCoeff=0.5783;MQ=54.02;MQ0=3;MQRankSum=-2.105;QD=7.35;ReadPosRankSum=-2.055;VQSLOD=1.9840;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:44.97:0,45,465	0/0:6,0:6:3.16:0,3,48	0/0:21,0:13:9:0,9,81	0/0:23,0:22:29.96:0,30,281	0/0:25,0:25:48.04:0,48,551	0/0:23,0:23:43.42:0,43,372	0/0:23,0:23:48.32:0,48,446	0/0:20,0:18:20.97:0,21,182	0/0:20,0:20:10.76:0,11,227	0/1:18,0:18:1.89:2,0,193	0/1:17,0:17:15.24:15,0,108	0/0:34,0:34:61.56:0,62,835	0/0:31,0:31:69.06:0,69,991	0/0:31,0:31:54.05:0,54,707	0/0:32,0:32:72.01:0,72,1038	0/0:20,0:20:42.09:0,42,543	0/0:32,0:32:28.35:0,28,324	0/0:18,0:18:44.91:0,45,486	1/1:14,0:13:17.90:170,18,0	1/1:8,8:16:23.67:194,24,0	1/1:18,4:22:53.89:592,54,0	0/0:18,0:18:42.07:0,42,520	0/0:27,0:27:60.02:0,60,721	0/0:21,0:21:50.70:0,51,470	0/0:29,0:29:66.02:0,66,895	0/1:28,0:28:23.21:23,0,222	0/0:25,0:25:19.19:0,19,268	0/0:4,0:4:8.99:0,9,76
chr10	15630394	.	AAAGGAAGG	A	3853.43	PASS	AB=1.000;AC=19;AF=0.365;AN=52;BaseQRankSum=-4.088;DP=562;FS=4.593;HRun=0;HaplotypeScore=177.8648;InbreedingCoeff=0.8142;MQ=46.59;MQ0=6;MQRankSum=-2.835;QD=23.35;ReadPosRankSum=-1.956;VQSLOD=2.7079;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:29.94:0,30,332	1/1:3,1:4:3.01:71,3,0	./.	./.	0/0:22,0:22:32.76:0,33,370	0/0:24,0:24:37.32:0,37,260	0/0:25,0:25:6.78:0,7,161	1/1:15,0:10:2.91:21,3,0	1/1:13,4:17:18.05:337,18,0	1/1:18,4:22:36.12:704,36,0	1/1:11,6:17:42.10:657,42,0	0/0:26,0:26:42.19:0,42,1102	0/0:27,0:27:48.16:0,48,967	0/0:28,0:28:39.07:0,39,557	0/0:30,0:30:54.11:0,54,1001	0/0:20,0:21:36.11:0,36,735	1/1:21,7:28:39.07:605,39,0	0/0:16,0:16:20.96:0,21,302	0/0:16,0:12:7.49:0,7,48	0/1:11,0:11:16.69:17,0,170	0/0:21,0:21:35.98:0,36,437	0/0:21,0:21:35.95:0,36,651	0/0:27,0:27:42.13:0,42,745	0/0:21,0:21:21:0,21,300	0/0:28,0:28:39.12:0,39,829	1/1:18,5:23:39.13:811,39,0	1/1:22,3:25:36.07:581,36,0	1/1:3,0:3:5.99:49,6,0
chr10	15630434	.	GAAA	G	469.48	PASS	AB=0.923;AC=5;AF=0.089;AN=56;BaseQRankSum=-5.015;DP=557;FS=4.145;HRun=3;HaplotypeScore=212.5384;InbreedingCoeff=0.8096;MQ=35.92;MQ0=8;MQRankSum=3.455;QD=7.96;ReadPosRankSum=-1.991;VQSLOD=-0.7503;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:42.82:0,43,667	0/0:6,0:6:8.96:0,9,134	0/0:15,0:5:15.05:0,15,315	0/0:15,0:9:24.08:0,24,535	1/1:8,2:10:23.31:171,23,0	1/1:21,4:25:12.52:270,13,0	0/1:22,2:24:3.02:153,0,3	0/0:19,0:13:36.12:0,36,774	0/0:17,0:17:45.07:0,45,719	0/0:22,0:22:31.89:0,32,758	0/0:16,0:16:11.99:0,12,597	0/0:27,0:27:64.66:0,65,926	0/0:28,0:27:68.97:0,69,1020	0/0:28,0:28:65.03:0,65,1034	0/0:28,0:28:56.95:0,57,703	0/0:22,0:22:52.48:0,52,846	0/0:23,0:23:35.84:0,36,675	0/0:13,0:13:32.46:0,32,397	0/0:16,0:11:27.09:0,27,557	0/0:14,0:14:36.01:0,36,629	0/0:19,0:19:38.97:0,39,576	0/0:25,0:25:65.74:0,66,1117	0/0:26,0:26:53.17:0,53,703	0/0:21,0:21:44.13:0,44,679	0/0:17,0:17:39.09:0,39,598	0/0:25,0:25:55.62:0,56,1061	0/0:22,0:22:40.05:0,40,787	0/0:8,0:8:21.07:0,21,432
chr10	15630458	.	G	GGAGGGAGA	32194.55	PASS	AB=0.604;AC=49;AF=0.875;AN=56;BaseQRankSum=-5.763;DP=616;FS=14.954;HRun=0;HaplotypeScore=147.3231;InbreedingCoeff=0.4278;MQ=43.93;MQ0=4;MQRankSum=-2.874;QD=55.99;ReadPosRankSum=4.667;VQSLOD=4.0687;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,15:22:11.58:517,12,0	1/1:1,10:11:15.05:530,15,0	0/0:19,0:7:11.62:0,12,246	0/0:22,0:13:26.70:0,27,490	1/1:3,2:7:3.01:108,3,0	1/1:9,19:31:44.45:1488,44,0	1/1:5,19:30:33.07:1240,33,0	1/1:11,13:24:54.18:1239,54,0	1/1:4,16:21:39.55:1550,40,0	1/1:3,23:29:75.21:2498,75,0	1/1:6,11:18:39.13:1458,39,0	1/1:6,19:27:30.02:1141,30,0	1/1:5,15:20:18.56:1406,19,0	1/1:4,24:31:45.15:1915,45,0	1/1:6,14:23:0.46:876,0,0	0/1:4,18:22:4.37:1738,0,4	0/1:8,19:29:3.30:1206,0,3	0/1:8,6:15:22.09:378,0,22	1/1:2,13:17:45.11:1290,45,0	1/1:0,14:15:36.12:1500,36,0	1/1:5,12:18:12.04:514,12,0	1/1:4,19:24:38.30:1674,38,0	1/1:4,14:19:14.79:768,15,0	1/1:7,15:22:22.63:906,23,0	1/1:7,15:23:5.29:752,5,0	1/1:4,23:32:87.25:2774,87,0	1/1:4,21:30:57.14:2214,57,0	1/1:2,6:10:12.04:519,12,0
chr10	15633334	.	T	TTTG	1183.51	PASS	AB=0.979;AC=10;AF=0.179;AN=56;BaseQRankSum=4.633;DP=630;FS=1.545;HRun=0;HaplotypeScore=101.0803;InbreedingCoeff=0.3091;MQ=61.85;MQ0=25;MQRankSum=1.997;QD=7.89;ReadPosRankSum=3.167;VQSLOD=2.3126;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:37:93.67:0,94,747	0/0:9,0:9:5.19:0,5,97	0/0:50,0:8:12.34:0,12,87	0/0:42,0:13:10.14:0,10,80	0/0:22,0:21:53.69:0,54,417	0/0:23,0:23:55.70:0,56,443	0/0:12,0:12:34.13:0,34,257	0/0:43,0:41:46.48:0,46,541	0/1:15,0:14:12.16:12,0,67	0/1:19,0:17:10.52:11,0,169	0/0:20,0:20:26.42:0,26,243	0/0:23,0:23:62.72:0,63,523	0/0:20,0:19:43.85:0,44,298	0/0:16,0:14:30.16:0,30,180	0/0:16,0:16:43.37:0,43,340	0/0:24,0:22:60.40:0,60,454	0/0:37,0:36:24.88:0,25,161	0/0:18,0:16:34.39:0,34,274	1/1:9,19:28:30.52:552,31,0	1/1:23,0:24:36.95:506,37,0	0/1:12,1:14:4.09:210,0,4	0/0:20,0:20:55.91:0,56,425	0/0:18,0:18:47.87:0,48,377	0/0:12,0:11:26.84:0,27,222	0/0:16,0:16:43.10:0,43,351	0/1:21,0:19:11.78:12,0,173	0/1:18,0:16:14.36:14,0,128	0/1:8,0:7:20.05:20,0,32
chr10	15633652	.	AC	A	987.46	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=4.371;DP=552;FS=6.202;HRun=8;HaplotypeScore=58.5522;InbreedingCoeff=0.9733;MQ=65.31;MQ0=1;MQRankSum=0.692;QD=17.95;ReadPosRankSum=-0.600;VQSLOD=3.1921;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:89.63:0,90,1044	0/0:5,0:5:15.03:0,15,170	0/0:20,0:14:29.83:0,30,304	0/0:8,0:6:9.02:0,9,98	0/0:20,0:20:54.13:0,54,616	0/0:19,0:20:57.14:0,57,663	0/0:20,0:20:45.12:0,45,529	0/0:28,0:27:50.63:0,51,534	0/0:21,0:21:60.15:0,60,685	0/0:20,0:20:51.11:0,51,591	0/0:17,0:17:45.13:0,45,531	0/0:25,0:25:66.14:0,66,735	0/0:15,0:15:34.56:0,35,405	0/0:19,0:19:54.09:0,54,581	0/0:19,0:19:54.09:0,54,577	0/0:16,0:16:42.07:0,42,469	0/0:24,0:24:60.06:0,60,635	0/0:20,0:20:47.59:0,48,508	1/1:1,13:14:38.94:337,39,0	1/1:2,13:15:32.97:301,33,0	1/1:2,24:26:51.08:492,51,0	0/0:23,0:23:57.06:0,57,626	0/0:17,0:17:51.13:0,51,592	0/0:26,0:26:72.15:0,72,829	0/0:17,0:17:42.10:0,42,505	0/0:28,0:28:78.05:0,78,841	0/0:19,0:19:51.09:0,51,586	0/0:9,0:9:27.08:0,27,325
chr10	15634314	.	GCC	G	5217.42	PASS	AB=0.695;AC=35;AF=0.625;AN=56;BaseQRankSum=-4.919;DP=531;FS=3.391;HRun=12;HaplotypeScore=81.0470;InbreedingCoeff=0.5431;MQ=73.43;MQ0=3;MQRankSum=-0.156;QD=11.80;ReadPosRankSum=4.807;VQSLOD=3.4853;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:10,20:32:23.43:225,23,0	0/0:1,0:6:9.98:0,10,35	0/0:12,0:10:5.90:0,6,107	0/1:11,1:12:44.96:45,0,118	0/1:10,7:19:9.73:141,0,10	1/1:7,9:16:24:244,24,0	1/1:7,16:23:39.04:397,39,0	0/1:9,1:13:16.84:17,0,39	0/0:4,0:13:23.48:0,23,132	0/0:9,0:13:5.93:0,6,29	0/0:7,1:12:3.85:0,4,12	1/1:5,14:20:29.48:286,29,0	1/1:12,17:30:37.95:347,38,0	1/1:5,15:20:24:244,24,0	1/1:2,22:27:47.27:503,47,0	1/1:1,25:27:65.86:653,66,0	0/1:10,3:31:38.60:39,0,144	1/1:4,18:22:39.07:395,39,0	1/1:2,0:15:10.19:88,10,0	1/1:5,0:21:24.66:107,25,0	1/1:9,0:31:38.36:166,38,0	0/1:4,12:16:0.12:189,0,0	1/1:3,9:12:14.21:151,14,0	1/1:4,29:34:68.60:664,69,0	1/1:5,13:18:32.78:317,33,0	0/0:9,0:12:7.74:0,8,30	0/0:5,0:9:5.46:0,5,19	0/0:6,0:10:9.98:0,10,35
chr10	15634325	.	CCA	C	545.59	PASS	AB=0.991;AC=16;AF=0.286;AN=56;BaseQRankSum=6.195;DP=519;FS=0.000;HRun=0;HaplotypeScore=97.1901;InbreedingCoeff=-0.2399;MQ=73.52;MQ0=3;MQRankSum=-2.551;QD=1.67;ReadPosRankSum=9.277;VQSLOD=-0.0380;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:27:40.02:40,0,65	0/0:6,0:6:11.68:0,12,66	0/0:14,0:11:26.79:0,27,239	0/1:15,1:15:26.85:27,0,161	0/1:17,0:16:16.57:17,0,100	0/1:12,0:12:38.04:45,0,38	0/1:25,0:25:25.85:26,0,147	0/0:16,0:16:31.59:0,32,273	0/0:15,0:15:29.43:0,29,211	0/0:13,0:13:32.80:0,33,268	0/0:9,0:9:11.92:0,12,102	0/1:22,0:22:29.32:29,0,101	0/1:24,0:24:67.74:68,0,68	0/1:17,0:17:25.75:38,0,26	0/1:29,0:29:47.02:47,0,82	0/1:31,0:31:68.90:69,0,73	0/0:31,0:30:35.24:0,35,299	0/1:23,1:24:28.72:87,0,29	0/0:16,0:16:16.14:0,16,155	0/0:16,0:16:20.58:0,21,81	0/0:29,0:29:49.35:0,49,247	0/1:18,0:18:35.32:35,0,72	1/1:9,1:10:12.01:65,12,0	0/1:35,1:35:49.67:90,0,50	0/1:19,0:19:26.50:26,0,32	0/0:12,0:12:23.80:0,24,188	0/0:8,0:8:14.68:0,15,94	0/0:7,0:6:17.57:0,18,102
chr10	15634388	.	AAGAG	A	1880.16	PASS	AB=0.830;AC=19;AF=0.365;AN=52;BaseQRankSum=-1.945;DP=558;FS=50.167;HRun=0;HaplotypeScore=132.8144;InbreedingCoeff=0.5937;MQ=64.38;MQ0=12;MQRankSum=2.712;QD=8.70;ReadPosRankSum=3.549;VQSLOD=0.8613;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:24,1:24:12.02:176,12,0	0/0:10,0:10:18.04:0,18,270	./.	./.	0/0:17,0:19:21.54:0,22,432	0/0:18,0:18:38.68:0,39,744	0/0:34,0:36:2.78:0,3,655	0/0:35,0:32:21.66:0,22,431	0/0:13,0:12:14.01:0,14,135	0/0:23,0:21:38.36:0,38,451	0/0:11,0:10:2.90:0,3,53	1/1:14,1:16:2.93:89,3,0	0/1:13,5:20:8.46:415,0,8	1/1:14,1:15:5.91:93,6,0	1/1:14,6:21:19.50:286,20,0	1/1:13,4:19:8.84:140,9,0	0/0:34,0:34:49.93:0,50,684	0/1:14,2:16:6.90:173,0,7	0/0:20,0:19:9.97:0,10,154	0/0:13,0:13:5.80:0,6,31	0/0:29,0:29:32.28:0,32,466	1/1:19,2:22:5.50:129,6,0	0/1:9,3:11:34.46:84,0,34	1/1:32,2:32:24.07:374,24,0	1/1:15,1:16:8.96:103,9,0	0/0:20,0:27:40.09:0,40,577	0/0:11,0:11:20.33:0,20,223	0/0:9,0:9:9.03:0,9,136
chr10	15639223	.	C	CT	22931.09	PASS	AB=1.000;AC=51;AF=0.911;AN=56;BaseQRankSum=-4.095;DP=802;FS=6.638;HRun=2;HaplotypeScore=96.3772;InbreedingCoeff=0.7836;MQ=80.52;MQ0=0;MQRankSum=-8.955;QD=30.05;ReadPosRankSum=7.507;VQSLOD=3.7448;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,47:49:99:1813,126,0	1/1:15,0:15:40.93:242,41,0	0/0:22,0:22:51.04:0,51,569	0/0:17,0:17:51.11:0,51,584	1/1:1,16:17:39.09:538,39,0	1/1:7,18:25:57.09:772,57,0	1/1:5,23:28:81.16:1087,81,0	0/1:28,0:28:9.39:269,0,9	1/1:33,0:33:37.07:408,37,0	1/1:43,0:43:94.29:591,94,0	1/1:18,0:18:51.16:294,51,0	1/1:0,27:27:65.96:950,66,0	1/1:0,34:34:96.32:1381,96,0	1/1:0,39:39:96.32:1381,96,0	1/1:1,34:35:96.32:1381,96,0	1/1:1,24:25:69.23:994,69,0	1/1:36,0:36:28.92:452,29,0	1/1:0,35:35:99:1465,102,0	1/1:3,16:19:48.14:654,48,0	1/1:0,23:23:64.48:863,64,0	1/1:2,68:70:99:2634,184,0	1/1:2,21:23:63.21:900,63,0	1/1:1,18:19:45.12:647,45,0	1/1:1,45:46:99:1814,126,0	1/1:1,16:17:45.15:648,45,0	1/1:25,1:26:16.85:286,17,0	1/1:29,0:29:51.30:399,51,0	1/1:4,0:4:11.70:68,12,0
chr10	15639225	.	T	TG	16458.29	PASS	AB=1.000;AC=51;AF=0.911;AN=56;BaseQRankSum=-2.074;DP=797;FS=9.494;HRun=3;HaplotypeScore=120.2894;InbreedingCoeff=0.8147;MQ=80.25;MQ0=0;MQRankSum=-7.071;QD=21.68;ReadPosRankSum=7.686;VQSLOD=3.3355;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:49,0:49:99:749,123,0	1/1:0,15:15:42.14:587,42,0	0/0:20,0:20:51.11:0,51,581	0/0:18,0:18:48.15:0,48,575	1/1:16,0:16:7.21:176,7,0	0/1:22,0:22:1.58:273,0,2	1/1:28,0:28:70.60:435,71,0	1/1:3,22:25:66.20:900,66,0	1/1:3,32:35:84.28:1173,84,0	1/1:1,44:45:99:1788,132,0	1/1:1,18:19:54.17:742,54,0	1/1:27,0:27:63.69:374,64,0	1/1:36,0:36:93.60:573,94,0	1/1:39,0:39:93.38:558,93,0	1/1:34,0:34:69.62:512,70,0	1/1:25,0:25:66.89:383,67,0	1/1:3,34:37:96.32:1344,96,0	1/1:36,0:36:99:594,99,0	1/1:17,0:17:43.03:258,43,0	1/1:23,0:23:55.63:334,56,0	1/1:67,0:67:99:1049,163,0	1/1:22,1:23:37.01:353,37,0	1/1:18,0:18:43.93:276,44,0	1/1:46,0:46:99:688,101,0	1/1:17,0:17:22.10:229,22,0	1/1:2,22:24:63.08:856,63,0	1/1:2,27:29:78.09:1087,78,0	1/1:0,7:7:12.04:168,12,0
chr10	15639274	.	CCTTGTTCT	C	3413.82	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=4.181;DP=718;FS=21.376;HRun=0;HaplotypeScore=219.0553;InbreedingCoeff=0.9857;MQ=70.55;MQ0=1;MQRankSum=-10.186;QD=45.52;ReadPosRankSum=0.219;VQSLOD=1.9692;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,99,4023	0/0:8,0:8:18.05:0,18,597	0/0:14,0:13:24.08:0,24,1021	0/0:15,0:15:36.09:0,36,1124	1/1:5,9:14:13.95:197,14,0	1/1:1,26:27:69.15:1716,69,0	1/1:6,28:34:66.05:1501,66,0	0/0:29,0:29:78.26:0,78,3140	0/0:27,0:27:63.22:0,63,2621	0/0:22,0:22:51.17:0,51,2093	0/0:16,0:16:39.13:0,39,1585	0/0:30,0:30:75.25:0,75,2978	0/0:32,0:32:90.28:0,90,3534	0/0:47,0:47:99:0,108,4412	0/0:32,0:32:75.26:0,75,3135	0/0:28,0:28:78.27:0,78,3207	0/0:36,0:36:87.26:0,87,3411	0/0:27,0:27:75.26:0,75,3176	0/0:23,0:23:63.22:0,63,2524	0/0:19,0:19:48.16:0,48,1834	0/0:62,0:62:99:0,166,6547	0/0:15,0:15:45.15:0,45,1920	0/0:12,0:12:27.55:0,28,1037	0/0:55,0:55:99:0,138,5774	0/0:19,0:19:54.19:0,54,2318	0/0:11,0:11:30.10:0,30,1247	0/0:19,0:19:48.13:0,48,1749	0/0:9,0:9:18.06:0,18,774
chr10	15639353	.	TAGGAGCC	T	3629.88	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=10.100;DP=781;FS=12.530;HRun=0;HaplotypeScore=185.7291;InbreedingCoeff=0.9971;MQ=80.72;MQ0=0;MQRankSum=-11.033;QD=55.84;ReadPosRankSum=-3.704;VQSLOD=1.9102;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,102,4092	0/0:6,0:6:18.06:0,18,738	0/0:23,0:23:60.21:0,60,2232	0/0:21,0:21:57.12:0,57,1670	0/0:20,0:20:54.19:0,54,2201	0/0:25,0:25:63.17:0,63,2326	0/0:32,0:32:90.31:0,90,3547	0/0:30,0:30:90.30:0,90,3342	0/0:30,0:30:90.29:0,90,3496	0/0:33,0:33:99:0,99,3804	0/0:16,0:16:48.14:0,48,1765	0/0:36,0:36:99:0,108,4403	0/0:40,0:40:99:0,111,4402	0/0:37,0:37:99:0,108,4159	0/0:39,0:39:99:0,114,4491	0/0:32,0:32:96.33:0,96,3923	0/0:51,0:51:99:0,154,6145	0/0:32,0:32:96.33:0,96,3917	1/1:8,17:25:57.16:1423,57,0	1/1:1,13:14:42.14:1059,42,0	1/1:6,20:26:51.04:1148,51,0	0/0:17,0:17:51.18:0,51,2010	0/0:20,0:20:54.19:0,54,2072	0/0:49,0:49:99:0,144,5607	0/0:22,0:22:66.23:0,66,2660	0/0:28,0:28:84.29:0,84,3368	0/0:26,0:26:78.26:0,78,3013	0/0:17,0:17:51.18:0,51,2074
chr10	15639394	.	G	GC	2555.91	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=7.602;DP=745;FS=3.711;HRun=1;HaplotypeScore=90.5874;InbreedingCoeff=1.0000;MQ=78.01;MQ0=0;MQRankSum=-6.448;QD=33.19;ReadPosRankSum=-1.777;VQSLOD=2.9431;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,114,1435	0/0:13,0:13:39.11:0,39,492	0/0:18,0:18:51.13:0,51,622	0/0:17,0:17:45.13:0,45,568	0/0:21,0:21:63.19:0,63,796	0/0:25,0:25:75.24:0,75,973	0/0:30,0:30:90.17:0,90,1122	0/0:21,0:21:53.67:0,54,672	0/0:27,0:27:81.26:0,81,1049	0/0:31,0:31:87.28:0,87,1115	0/0:16,0:16:45.15:0,45,583	0/0:33,0:33:87.28:0,87,1124	0/0:36,0:36:99:0,108,1355	0/0:33,0:33:99:0,99,1270	0/0:29,0:29:87.28:0,87,1129	0/0:35,0:35:99:0,102,1297	0/0:38,0:38:99:0,111,1440	0/0:30,0:30:90.24:0,90,1135	1/1:0,20:20:60.18:875,60,0	1/1:0,23:23:57.19:845,57,0	1/1:5,28:34:69.01:979,69,0	0/0:19,0:19:57.16:0,57,710	0/0:19,0:19:54.14:0,54,654	0/0:40,0:40:99:0,117,1503	0/0:21,0:21:63.20:0,63,817	0/0:33,0:33:99:0,99,1259	0/0:29,0:29:87.24:0,87,1080	0/0:16,0:16:48.13:0,48,594
chr10	15641494	.	TGGTCTCAG	T	4597.47	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=11.815;DP=695;FS=18.314;HRun=0;HaplotypeScore=181.6453;InbreedingCoeff=0.9536;MQ=77.51;MQ0=0;MQRankSum=-11.268;QD=32.84;ReadPosRankSum=-1.185;VQSLOD=3.3052;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:84.29:0,84,3585	0/0:11,0:11:23.87:0,24,941	0/0:18,0:18:26.26:0,26,1473	0/0:18,0:18:48.16:0,48,1854	1/1:5,9:14:15.94:417,16,0	1/1:4,11:15:30.10:813,30,0	1/1:10,34:44:81.28:2238,81,0	0/0:30,0:30:60.21:0,60,2337	0/0:42,0:42:99:0,123,5297	0/0:22,0:22:60.21:0,60,2536	0/0:7,0:7:21.07:0,21,778	0/0:44,0:44:99:0,132,5073	0/0:32,0:32:96.33:0,96,3891	0/0:30,0:30:84.29:0,84,3570	0/0:35,0:35:99:0,102,4376	0/0:32,0:32:87.30:0,87,3713	0/0:43,0:42:99:0,117,4753	0/0:28,0:28:81.28:0,81,3389	1/1:7,7:14:24.06:551,24,0	1/1:5,1:6:3.01:83,3,0	1/1:20,27:47:17.56:495,18,0	0/0:11,0:11:27.09:0,27,1168	0/0:10,0:10:27.09:0,27,1043	0/0:36,0:36:99:0,99,4228	0/0:15,0:15:36.12:0,36,1575	0/0:21,0:21:54.19:0,54,2335	0/0:27,0:27:75.26:0,75,3174	0/0:5,0:5:15.05:0,15,655
chr10	15642207	.	TGGCTCTGAGTCTGCACGGCAGGC	T	7525.05	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=11.237;DP=682;FS=1.895;HRun=0;HaplotypeScore=382.7468;InbreedingCoeff=0.9506;MQ=74.94;MQ0=0;MQRankSum=-9.019;QD=61.18;ReadPosRankSum=1.316;VQSLOD=3.1414;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,117,10398	0/0:12,0:12:33.11:0,33,2736	0/0:16,0:16:45.15:0,45,2809	0/0:15,0:15:45.15:0,45,3014	1/1:4,9:13:20.35:841,20,0	1/1:8,17:25:33.11:2044,33,0	1/1:7,19:26:42.14:2641,42,0	0/0:31,0:31:81.28:0,81,5770	0/0:31,0:31:87.28:0,87,7595	0/0:27,0:27:75.25:0,75,6477	0/0:12,0:12:36.12:0,36,3080	0/0:41,0:41:99:0,111,10185	0/0:38,0:38:99:0,108,9828	0/0:30,0:30:84.29:0,84,7972	0/0:40,0:40:99:0,114,10734	0/0:35,0:34:99:0,102,9448	0/0:23,0:23:66.23:0,66,6142	0/0:27,0:27:78.27:0,78,7808	1/1:5,11:16:30.08:1277,30,0	1/1:3,1:4:3.01:189,3,0	1/1:23,16:39:10.76:533,11,0	0/0:20,0:20:54.17:0,54,3991	0/0:11,0:11:27.56:0,28,2066	0/0:42,0:42:99:0,114,10573	0/0:20,0:20:57.20:0,57,4748	0/0:24,0:24:69.23:0,69,5706	0/0:18,0:18:54.19:0,54,4748	0/0:5,0:5:15.05:0,15,1624
chr10	15643872	.	G	GA	2704.85	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=16.214;DP=714;FS=2.165;HRun=1;HaplotypeScore=133.1186;InbreedingCoeff=0.9849;MQ=72.14;MQ0=0;MQRankSum=-14.066;QD=21.13;ReadPosRankSum=-5.613;VQSLOD=1.9281;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:61,0:61:99:0,181,2335	0/0:11,0:11:33.11:0,33,429	0/0:14,0:14:10.83:0,11,380	0/0:17,1:18:12.25:0,12,448	1/1:4,12:16:28.79:252,29,0	1/1:3,19:22:63.04:592,63,0	1/1:11,21:33:89.73:793,90,0	0/0:33,0:33:93.29:0,93,1184	0/0:16,0:16:48.16:0,48,623	0/0:31,0:31:93.30:0,93,1208	0/0:21,0:21:57.16:0,57,723	0/0:32,0:32:96.26:0,96,1200	0/0:32,0:32:93.30:0,93,1207	0/0:34,0:34:93.30:0,93,1206	0/0:33,0:33:93.29:0,93,1193	0/0:34,0:34:99:0,102,1323	0/0:38,0:38:99:0,111,1440	0/0:42,0:42:99:0,126,1603	1/1:9,13:22:61.60:551,62,0	1/1:5,14:19:53.77:463,54,0	1/1:8,7:16:29.79:242,30,0	0/0:21,0:21:63.20:0,63,817	0/0:11,0:11:33.09:0,33,412	0/0:29,0:29:87.27:0,87,1116	0/0:17,0:17:51.17:0,51,662	0/0:30,0:30:90.28:0,90,1152	0/0:21,0:20:63.20:0,63,814	0/0:7,0:7:21.07:0,21,273
chr10	15643873	.	AC	A	896.40	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=14.943;DP=685;FS=0.406;HRun=1;HaplotypeScore=123.1971;InbreedingCoeff=0.9900;MQ=73.27;MQ0=0;MQRankSum=-12.629;QD=8.62;ReadPosRankSum=-3.870;VQSLOD=-0.4958;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:61,0:61:99:0,184,2916	0/0:11,0:11:33.11:0,33,528	0/0:14,0:14:16.56:0,17,501	0/0:18,0:18:33.46:0,33,618	1/1:14,0:14:16.69:128,17,0	1/1:20,0:20:46.88:177,47,0	1/1:25,1:26:62.92:298,63,0	0/0:32,0:32:93.31:0,93,1466	0/0:16,0:16:48.16:0,48,767	0/0:31,0:31:93.32:0,93,1487	0/0:20,0:20:60.16:0,60,910	0/0:32,0:32:96.31:0,96,1504	0/0:31,0:31:93.32:0,93,1486	0/0:33,0:33:96.33:0,96,1526	0/0:33,0:33:96.31:0,96,1509	0/0:34,0:34:99:0,102,1626	0/0:37,0:37:99:0,111,1769	0/0:42,0:42:99:0,126,2007	1/1:13,5:18:48.62:255,49,0	1/1:16,0:16:41.98:174,42,0	1/1:9,1:10:13.59:51,14,0	0/0:21,0:21:63.21:0,63,1003	0/0:11,0:11:33.10:0,33,504	0/0:29,0:29:87.30:0,87,1391	0/0:17,0:17:51.17:0,51,815	0/0:30,0:30:90.29:0,90,1404	0/0:21,0:20:63.21:0,63,1000	0/0:7,0:7:21.07:0,21,336
chr10	15643874	.	C	CCTGTAA	7941.08	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=14.649;DP=683;FS=0.000;HRun=0;HaplotypeScore=166.6847;InbreedingCoeff=0.9470;MQ=73.34;MQ0=0;MQRankSum=-12.318;QD=78.62;ReadPosRankSum=-3.478;VQSLOD=4.3660;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:61,0:61:99:0,184,4518	0/0:11,0:11:33.11:0,33,845	0/0:14,0:14:35.48:0,35,738	0/0:17,0:18:0.20:0,0,806	1/1:1,12:14:29.77:766,30,0	1/1:1,19:20:57.16:1739,57,0	1/1:4,20:24:72.22:2069,72,0	0/0:31,0:31:90.31:0,90,2286	0/0:16,0:16:48.16:0,48,1218	0/0:31,0:31:93.32:0,93,2348	0/0:20,0:20:57.18:0,57,1391	0/0:32,0:32:93.31:0,93,2272	0/0:31,0:31:93.32:0,93,2371	0/0:34,0:34:96.30:0,96,2327	0/0:31,0:31:93.31:0,93,2318	0/0:34,0:34:99:0,102,2519	0/0:38,0:38:99:0,111,2762	0/0:42,0:42:99:0,126,3098	1/1:5,13:18:51.07:1393,51,0	1/1:0,14:16:45.13:1425,45,0	1/1:3,6:9:18.06:549,18,0	0/0:21,0:21:63.21:0,63,1552	0/0:11,0:11:33.11:0,33,769	0/0:29,0:29:87.30:0,87,2138	0/0:17,0:17:51.18:0,51,1306	0/0:30,0:30:87.27:0,87,2079	0/0:21,0:20:63.20:0,63,1542	0/0:9,0:9:21.07:0,21,538
chr10	15647155	.	G	GGGAT	9656.64	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-10.196;DP=767;FS=0.000;HRun=0;HaplotypeScore=124.6427;InbreedingCoeff=0.9998;MQ=80.41;MQ0=0;MQRankSum=-3.005;QD=56.14;ReadPosRankSum=2.217;VQSLOD=6.0243;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,126,2246	0/0:10,0:10:27.09:0,27,503	0/0:17,0:17:45.15:0,45,807	0/0:22,0:22:57.13:0,57,903	1/1:8,27:35:75.25:1878,75,0	1/1:1,19:21:60.21:1592,60,0	1/1:7,21:32:63.17:1603,63,0	0/0:32,0:32:93.26:0,93,1531	0/0:23,0:23:66.23:0,66,1209	0/0:35,0:35:96.33:0,96,1771	0/0:19,0:19:54.17:0,54,970	0/0:31,0:31:87.27:0,87,1522	0/0:45,0:45:99:0,129,2256	0/0:32,0:32:90.30:0,90,1641	0/0:30,0:30:78.27:0,78,1441	0/0:30,0:30:87.27:0,87,1554	0/0:39,0:37:99:0,99,1802	0/0:21,0:21:57.20:0,57,1041	1/1:2,14:19:54.15:1263,54,0	1/1:5,19:24:60.21:1592,60,0	1/1:10,28:41:66.23:1728,66,0	0/0:33,0:33:99:0,99,1783	0/0:27,0:27:78.27:0,78,1441	0/0:19,0:19:54.17:0,54,968	0/0:19,0:19:54.17:0,54,958	0/0:21,0:21:57.20:0,57,1056	0/0:33,0:33:96.30:0,96,1720	0/0:13,0:13:39.13:0,39,728
chr10	15649122	.	TA	T	9928.22	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=14.057;DP=641;FS=4.348;HRun=8;HaplotypeScore=78.5014;InbreedingCoeff=0.9973;MQ=73.79;MQ0=0;MQRankSum=-3.514;QD=24.88;ReadPosRankSum=2.592;VQSLOD=5.7536;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,41:41:99:1071,111,0	0/0:17,0:17:39.12:0,39,471	0/0:24,2:22:17.37:0,17,395	0/0:22,0:20:38.94:0,39,433	1/1:6,27:33:92.90:844,93,0	1/1:3,20:23:63.09:603,63,0	1/1:3,20:23:59.96:556,60,0	0/0:31,0:31:81.23:0,81,949	0/0:22,0:22:60.17:0,60,712	0/0:28,0:28:69.18:0,69,802	0/0:17,1:18:19.18:0,19,514	1/1:2,25:27:63.10:608,63,0	1/1:1,24:25:63.10:608,63,0	1/1:2,17:19:51.08:492,51,0	1/1:2,22:24:60.10:579,60,0	1/1:1,17:18:44.94:434,45,0	0/0:29,0:29:78.17:0,78,924	1/1:2,19:21:53.95:521,54,0	1/1:7,20:27:72.07:682,72,0	1/1:1,22:23:60.03:567,60,0	1/1:2,12:14:35.99:336,36,0	1/1:2,14:16:42.06:405,42,0	1/1:1,8:9:24.04:232,24,0	1/1:1,39:40:99:1014,105,0	1/1:1,15:16:39.06:376,39,0	0/0:22,0:22:54.17:0,54,650	0/0:18,0:18:51.14:0,51,605	0/0:9,0:9:27.08:0,27,326
chr10	15649146	.	C	CA	4011.18	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=2.633;DP=649;FS=2.847;HRun=6;HaplotypeScore=95.8302;InbreedingCoeff=0.8999;MQ=62.71;MQ0=0;MQRankSum=-8.070;QD=25.23;ReadPosRankSum=-0.554;VQSLOD=3.2035;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,105,1047	0/0:14,0:14:39.09:0,39,398	0/0:22,0:16:41.29:0,41,364	0/1:17,0:15:25.65:26,0,131	1/1:5,23:28:66.11:781,66,0	1/1:1,20:21:51.13:624,51,0	1/1:3,25:28:69.18:846,69,0	0/0:39,0:39:96.20:0,96,974	0/0:27,0:27:75.17:0,75,765	0/0:37,0:37:99:0,102,1040	0/0:16,0:16:42.09:0,42,429	0/0:26,0:26:66.09:0,66,651	0/0:23,0:23:63.14:0,63,643	0/0:19,0:19:51.12:0,51,520	0/0:22,0:22:60.13:0,60,612	0/0:14,0:14:42.10:0,42,429	0/0:30,0:30:72.15:0,72,734	0/0:20,0:20:54.12:0,54,549	1/1:6,19:25:60.19:754,60,0	1/1:6,16:22:42.13:528,42,0	1/1:3,15:18:36.12:452,36,0	0/0:13,0:13:39.09:0,39,396	0/0:15,0:15:42.08:0,42,420	0/0:40,0:40:99:0,102,1040	0/0:20,0:20:48.11:0,48,490	0/0:17,0:17:42.08:0,42,422	0/0:20,0:20:45.08:0,45,452	0/0:12,0:12:30.07:0,30,306
chr10	15649942	.	TTC	T	1843.45	PASS	AB=0.986;AC=30;AF=0.536;AN=56;BaseQRankSum=-4.257;DP=445;FS=32.724;HRun=0;HaplotypeScore=100.3045;InbreedingCoeff=-0.3507;MQ=64.21;MQ0=7;MQRankSum=0.455;QD=5.01;ReadPosRankSum=-5.867;VQSLOD=-0.7238;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:18,0:16:34.43:38,0,34	0/0:8,0:8:2.92:0,3,48	0/0:64,0:22:23.90:0,24,265	0/1:70,0:25:25.67:26,0,64	1/1:7,0:6:17.06:111,17,0	1/1:11,0:10:7.92:58,8,0	1/1:5,0:5:14.86:104,15,0	1/1:16,1:16:8.24:163,8,0	0/1:8,0:8:1.15:36,0,1	0/1:12,1:13:55.77:69,0,56	0/1:10,0:10:6.64:95,0,7	0/1:14,0:14:9.42:109,0,9	0/1:8,1:9:6.55:94,0,7	0/1:11,0:11:7.76:28,0,8	0/1:14,0:13:30.08:30,0,48	0/1:14,0:13:22.36:22,0,47	0/1:22,0:22:56.83:57,0,59	0/1:10,0:10:6.95:75,0,7	0/1:18,0:18:38.59:186,0,39	0/1:7,0:7:1.96:2,0,29	0/0:5,0:5:14.04:0,14,69	1/1:5,0:5:0.65:35,1,0	0/1:8,0:7:15.32:16,0,15	0/1:7,0:7:20.95:22,0,21	0/1:19,1:20:12.46:172,0,12	0/1:28,2:30:25.39:356,0,25	0/1:13,0:13:5.50:91,0,5	0/1:6,0:5:1.70:5,0,2
chr10	15649943	.	TC	T	4123.62	PASS	AB=0.934;AC=53;AF=0.946;AN=56;BaseQRankSum=-6.171;DP=440;FS=1.909;HRun=1;HaplotypeScore=88.6848;InbreedingCoeff=0.4521;MQ=63.20;MQ0=7;MQRankSum=1.704;QD=10.97;ReadPosRankSum=-1.581;VQSLOD=1.1223;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,3:16:17.45:149,17,0	1/1:8,0:8:14.19:57,14,0	0/0:62,1:21:24.78:0,25,244	0/1:65,4:24:19.16:19,0,49	1/1:1,1:6:17.49:118,17,0	1/1:10,1:10:10.83:62,11,0	1/1:4,0:5:14.85:103,15,0	1/1:14,2:16:41.26:314,41,0	1/1:7,1:8:11.49:94,11,0	1/1:13,0:13:23.31:132,23,0	1/1:9,0:9:24.53:159,25,0	1/1:12,2:14:31.83:214,32,0	1/1:6,3:9:18.95:168,19,0	1/1:1,10:11:4.67:58,5,0	1/1:14,0:13:23.11:133,23,0	1/1:14,0:13:22.67:146,23,0	1/1:20,1:21:27.16:200,27,0	1/1:7,2:9:18.22:158,18,0	1/1:14,0:17:38.72:260,39,0	1/1:5,0:7:13.47:73,13,0	1/1:5,0:5:4.43:10,4,0	1/1:3,2:5:14.17:118,14,0	1/1:8,0:7:11.80:87,12,0	1/1:6,1:7:5.44:78,5,0	1/1:13,7:20:42.32:411,42,0	1/1:27,2:29:59.20:505,59,0	1/1:12,1:13:29.93:212,30,0	1/1:6,0:5:13.36:84,13,0
chr10	15649989	.	TTG	T	1362.59	PASS	AB=0.992;AC=31;AF=0.554;AN=56;BaseQRankSum=-3.599;DP=525;FS=18.910;HRun=0;HaplotypeScore=92.9793;InbreedingCoeff=-0.3599;MQ=32.47;MQ0=55;MQRankSum=-1.497;QD=3.08;ReadPosRankSum=-1.470;VQSLOD=0.4156;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:20:21.13:81,0,21	0/1:8,1:9:9.40:65,0,9	0/0:35,1:6:6.74:0,7,32	0/0:40,0:4:9.70:0,10,55	1/1:19,0:11:3.35:53,3,0	1/1:16,1:15:10.53:125,11,0	0/0:7,0:6:10.31:0,10,42	0/1:26,0:22:27.94:119,0,28	0/1:13,0:10:1.62:27,0,2	0/1:19,0:19:55.32:91,0,55	0/1:12,0:12:51.18:51,0,61	0/1:13,0:11:11.73:12,0,85	0/1:6,0:4:12.94:13,0,14	1/1:14,0:10:16.19:93,16,0	0/1:16,0:14:16.34:16,0,43	0/1:20,0:17:44.92:45,0,116	0/1:32,0:22:45.25:45,0,74	0/1:15,0:9:1.36:1,0,50	0/1:23,0:20:60.76:86,0,61	0/1:17,0:16:24.92:65,0,25	0/1:8,0:5:3.25:22,0,3	0/1:11,0:8:14.20:14,0,33	1/1:10,0:9:5.21:38,5,0	1/1:6,0:3:5.83:33,6,0	0/1:21,0:19:49.43:55,0,49	0/1:43,0:33:99:225,0,106	0/1:21,0:17:29.93:30,0,64	1/1:15,2:9:8.41:115,8,0
chr10	15653845	.	TGGCGGCG	T	4184.13	PASS	AC=48;AF=0.960;AN=50;BaseQRankSum=-1.732;DP=182;FS=18.195;HRun=0;HaplotypeScore=42.1147;InbreedingCoeff=0.0589;MQ=62.59;MQ0=1;MQRankSum=-1.732;QD=24.47;ReadPosRankSum=1.422;VQSLOD=1.3098;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,8:12:18.06:432,18,0	1/1:0,1:1:3.01:72,3,0	./.	0/0:6,0:5:1.05:0,1,7	1/1:2,1:3:3.01:50,3,0	1/1:1,5:6:15.05:339,15,0	1/1:7,10:17:24.08:576,24,0	1/1:3,4:7:11.57:118,12,0	1/1:2,1:3:3.01:72,3,0	1/1:3,3:6:8.92:160,9,0	1/1:0,2:2:3.01:51,3,0	1/1:1,3:4:6.02:144,6,0	1/1:0,1:1:3.01:72,3,0	1/1:2,3:5:9.03:216,9,0	1/1:1,3:4:6.02:144,6,0	1/1:1,3:4:6.02:144,6,0	1/1:8,9:17:15.05:360,15,0	1/1:6,10:16:15.05:361,15,0	1/1:0,3:3:8.93:111,9,0	1/1:0,1:1:3.01:51,3,0	1/1:25,11:35:8.95:194,9,0	./.	1/1:1,1:2:3.01:50,3,0	1/1:6,8:14:6.02:109,6,0	1/1:0,2:2:3.01:72,3,0	./.	1/1:1,2:3:6.02:144,6,0	1/1:0,2:2:6.02:144,6,0
chr10	15654817	.	TCCCC	T	6500.25	PASS	AC=34;AF=0.630;AN=54;BaseQRankSum=-1.672;DP=364;FS=0.000;HRun=13;HaplotypeScore=80.5904;InbreedingCoeff=0.7582;MQ=71.81;MQ0=1;MQRankSum=-2.587;QD=22.26;ReadPosRankSum=4.769;VQSLOD=3.4483;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,18:23:39.06:550,39,0	0/0:1,0:1:3.01:0,3,51	0/0:15,0:11:8.15:0,8,102	0/0:9,0:7:10.33:0,10,111	1/1:3,0:10:11.72:74,12,0	1/1:2,0:19:31.59:175,32,0	1/1:2,0:19:40.89:245,41,0	0/0:7,0:9:6.01:0,6,64	0/0:6,0:7:3.95:0,4,98	0/0:5,0:7:7.05:0,7,107	0/0:2,0:2:5.99:0,6,60	1/1:5,18:23:41.75:612,42,0	1/1:7,11:18:20.95:307,21,0	1/1:7,13:20:29.99:438,30,0	1/1:4,11:16:27.01:375,27,0	1/1:7,15:22:42.06:614,42,0	0/0:9,0:15:24.36:0,24,271	1/1:3,21:24:57.17:828,57,0	1/1:2,4:6:15:188,15,0	1/1:0,3:3:2.99:44,3,0	1/1:11,22:33:53.92:790,54,0	1/1:1,5:6:9.03:131,9,0	1/1:5,3:8:2.92:37,3,0	1/1:5,19:26:45.96:620,46,0	1/1:1,15:16:31.32:473,31,0	0/0:3,0:3:3.01:0,3,30	0/0:2,0:4:3.01:0,3,58	./.
chr10	15655247	.	TGG	T	1775.62	PASS	AB=0.929;AC=13;AF=0.232;AN=56;BaseQRankSum=-0.481;DP=437;FS=7.268;HRun=11;HaplotypeScore=103.2516;InbreedingCoeff=0.8092;MQ=68.00;MQ0=0;MQRankSum=-4.065;QD=15.71;ReadPosRankSum=2.533;VQSLOD=2.2547;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:22:33.69:0,34,341	0/0:4,0:4:8.97:0,9,91	0/0:9,1:12:27.39:0,27,228	0/1:12,0:11:1.97:2,0,70	1/1:4,11:15:20.64:213,21,0	1/1:5,9:14:35.12:380,35,0	1/1:5,16:22:56.82:568,57,0	0/0:10,0:10:6.01:0,6,72	0/0:17,0:24:6.93:0,7,163	0/0:9,0:10:6.01:0,6,71	0/0:1,0:2:2.50:0,2,9	0/0:19,0:20:32.18:0,32,443	0/0:15,0:15:21.06:0,21,303	0/0:19,0:20:40.88:0,41,428	0/0:18,0:19:23.28:0,23,270	0/0:19,0:19:45.10:0,45,591	0/0:28,0:30:58.60:0,59,705	0/0:28,0:29:58.99:0,59,820	1/1:6,4:11:29.81:298,30,0	1/1:3,5:8:18.02:191,18,0	1/1:8,20:30:30.56:306,31,0	0/0:10,1:11:8.70:0,9,79	0/0:5,0:5:9.03:0,9,139	0/0:28,0:30:59.47:0,59,761	0/0:11,0:12:30.08:0,30,412	0/0:16,0:18:25.93:0,26,320	0/0:8,0:9:23.54:0,24,290	0/0:3,0:3:9.01:0,9,115
chr10	15655271	.	C	CG	17523.07	PASS	AB=0.900;AC=53;AF=0.946;AN=56;BaseQRankSum=-5.510;DP=534;FS=1.146;HRun=2;HaplotypeScore=80.7703;InbreedingCoeff=0.6078;MQ=67.12;MQ0=0;MQRankSum=-4.372;QD=33.76;ReadPosRankSum=2.773;VQSLOD=5.1755;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,22:25:57.19:820,57,0	1/1:0,6:6:15.05:216,15,0	0/1:8,1:9:6:98,0,6	0/0:15,0:14:33.90:0,34,379	1/1:4,15:19:27.09:372,27,0	1/1:1,17:18:48.16:688,48,0	1/1:5,27:32:81.27:1153,81,0	1/1:2,14:16:36.07:494,36,0	1/1:2,23:25:75.18:1011,75,0	1/1:3,18:21:54.11:718,54,0	1/1:0,1:1:3.01:43,3,0	1/1:4,26:30:63.20:897,63,0	1/1:1,16:17:39.13:558,39,0	1/1:2,20:22:54.14:753,54,0	1/1:1,22:23:57.19:814,57,0	1/1:2,22:24:60.20:863,60,0	1/1:0,26:26:69.23:992,69,0	1/1:1,27:28:68.59:990,69,0	1/1:0,13:13:39.13:556,39,0	1/1:0,13:13:36.12:517,36,0	1/1:6,30:36:53.69:678,54,0	1/1:2,10:12:24.08:343,24,0	1/1:0,10:10:27.09:388,27,0	1/1:0,28:28:69.23:992,69,0	1/1:1,22:23:63.21:905,63,0	1/1:1,18:19:51.17:719,51,0	1/1:0,14:14:39.13:558,39,0	1/1:0,9:9:27.09:388,27,0
chr10	15657262	.	TTGCTTAAGC	T	2207.38	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.099;DP=675;FS=5.699;HRun=0;HaplotypeScore=180.3598;InbreedingCoeff=0.9757;MQ=85.17;MQ0=0;MQRankSum=-7.617;QD=38.73;ReadPosRankSum=-2.189;VQSLOD=2.8701;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,163,7611	0/0:7,0:7:18.06:0,18,763	0/0:27,0:27:63.17:0,63,2514	0/0:26,0:26:75.22:0,75,2887	0/0:10,0:10:27.09:0,27,1298	0/0:16,0:16:39.13:0,39,1874	0/0:29,0:29:84.27:0,84,3870	0/0:36,0:36:93.31:0,93,3974	0/0:11,0:11:30.10:0,30,1415	0/0:19,0:19:57.20:0,57,2673	0/0:12,0:12:33.11:0,33,1493	0/0:35,0:35:99:0,102,4507	0/0:25,0:25:75.24:0,75,3335	0/0:31,0:31:90.29:0,90,4076	0/0:38,0:38:99:0,108,5053	0/0:45,0:45:99:0,132,6082	0/0:41,0:41:99:0,105,4820	0/0:35,0:35:99:0,99,4468	1/1:5,10:15:33.06:788,33,0	1/1:1,12:13:30.10:846,30,0	1/1:11,18:28:30.06:716,30,0	0/0:16,0:16:48.16:0,48,2299	0/0:16,0:16:39.13:0,39,1836	0/0:33,0:33:93.31:0,93,4064	0/0:14,0:14:42.14:0,42,2019	0/0:21,0:21:60.21:0,60,2657	0/0:18,0:17:48.16:0,48,2161	0/0:3,0:3:9.03:0,9,433
chr10	15658960	.	TTCTATCTATCTA	T	9096.27	PASS	AB=1.000;AC=44;AF=0.917;AN=48;BaseQRankSum=0.026;DP=607;FS=0.000;HRun=0;HaplotypeScore=205.3932;InbreedingCoeff=0.0919;MQ=68.20;MQ0=8;MQRankSum=-0.599;QD=17.77;ReadPosRankSum=-2.347;VQSLOD=3.5492;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:33,0:32:42.02:886,42,0	1/1:8,0:8:9.03:213,9,0	./.	./.	1/1:25,0:25:5.89:119,6,0	1/1:24,0:24:18.06:401,18,0	1/1:19,0:17:21.03:341,21,0	1/1:41,0:39:8.90:60,9,0	1/1:17,0:17:18.06:411,18,0	1/1:15,0:24:0.31:148,0,0	./.	1/1:29,0:29:19.25:170,19,0	1/1:16,0:16:15.03:257,15,0	1/1:16,0:15:24.05:498,24,0	1/1:21,0:21:33.10:667,33,0	1/1:33,0:33:39.11:760,39,0	1/1:36,0:35:51.14:1057,51,0	0/1:13,0:13:73.17:296,0,73	1/1:13,0:13:6.02:106,6,0	1/1:18,0:18:21.06:441,21,0	1/1:28,0:28:27.06:630,27,0	./.	0/0:10,11:21:0.47:0,0,2	1/1:23,0:23:17.99:306,18,0	0/1:18,0:16:12.98:137,0,13	1/1:19,0:19:30.10:686,30,0	1/1:9,0:9:9:126,9,0	1/1:26,0:26:18.03:383,18,0
chr10	15658999	.	TATCTATCTATCTATCTATCCATCC	T	3150.40	PASS	AB=1.000;AC=23;AF=0.442;AN=52;BaseQRankSum=3.056;DP=551;FS=22.436;HRun=0;HaplotypeScore=343.7615;InbreedingCoeff=-0.3336;MQ=52.93;MQ0=24;MQRankSum=-1.971;QD=7.36;ReadPosRankSum=2.658;VQSLOD=1.0637;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:37,0:36:99:173,0,1219	0/1:7,0:7:59.90:89,0,60	./.	./.	1/1:2,22:23:10.12:249,10,0	1/1:19,0:19:13.29:542,13,0	1/1:19,0:16:15.40:317,15,0	0/1:33,0:29:11.60:12,0,55	0/1:14,0:14:99:188,0,113	0/0:22,0:19:34.72:0,35,496	0/0:12,0:10:13.23:0,13,164	0/0:26,0:26:50.92:0,51,1531	0/1:18,0:18:36.77:37,0,702	0/1:26,0:25:63.42:63,0,1525	0/1:24,0:24:99:195,0,804	0/1:25,0:25:99:246,0,671	0/1:32,0:31:99:251,0,270	0/1:19,0:19:99:101,0,761	0/1:13,0:12:31.10:31,0,80	0/1:22,0:21:99:175,0,214	0/1:24,0:22:99:114,0,159	0/0:22,0:19:33.11:0,33,693	0/0:20,0:19:14.36:0,14,132	0/1:23,0:22:99:192,0,452	0/0:17,0:15:33.05:0,33,786	0/1:20,0:18:99:306,0,121	0/1:13,0:13:24.50:24,0,100	0/1:16,0:15:9.06:9,0,97
chr10	15659003	.	TATCTATCTATCTATCC	T	11184.82	PASS	AB=1.000;AC=39;AF=0.750;AN=52;BaseQRankSum=1.980;DP=544;FS=10.461;HRun=0;HaplotypeScore=232.3553;InbreedingCoeff=0.0058;MQ=53.10;MQ0=24;MQRankSum=-1.654;QD=22.28;ReadPosRankSum=2.993;VQSLOD=2.4456;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:39,0:38:99:684,0,304	1/1:7,0:7:15.04:369,15,0	./.	./.	1/1:23,0:22:8.10:134,8,0	1/1:20,0:20:54:746,54,0	1/1:21,0:18:31.57:441,32,0	1/1:29,0:24:8.77:60,9,0	1/1:15,0:15:39.05:671,39,0	1/1:24,0:21:30.34:431,30,0	1/1:12,0:10:8.28:115,8,0	0/1:25,0:25:81.94:82,0,469	0/1:18,0:18:99:210,0,204	0/1:27,0:26:99:312,0,517	0/1:24,0:24:99:581,0,188	0/1:27,0:27:99:592,0,173	1/1:31,0:30:69:1485,69,0	0/1:18,0:18:99:266,0,277	1/1:6,5:10:14.98:234,15,0	1/1:24,0:23:47.88:753,48,0	1/1:24,0:22:38.45:859,38,0	0/0:23,0:20:35.88:0,36,351	0/0:19,0:18:3.47:0,3,29	0/1:22,0:21:99:273,0,103	0/1:17,0:15:40.24:40,0,262	1/1:21,0:19:51.03:963,51,0	1/1:13,0:13:29.96:337,30,0	1/1:10,0:9:21.02:549,21,0
chr10	15661462	.	GGAGA	G	2505.26	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.745;DP=702;FS=5.166;HRun=0;HaplotypeScore=128.9506;InbreedingCoeff=0.9529;MQ=77.32;MQ0=2;MQRankSum=-3.856;QD=36.31;ReadPosRankSum=-0.702;VQSLOD=3.5623;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:78.27:0,78,2026	0/0:8,0:8:24.08:0,24,624	0/0:37,0:34:81.51:0,82,1877	0/0:33,0:29:57.02:0,57,1428	1/1:0,13:13:5.49:107,5,0	1/1:1,16:17:42.14:754,42,0	1/1:3,35:38:99:1779,99,0	0/0:28,0:27:66.23:0,66,1677	0/0:28,0:28:72.25:0,72,1808	0/0:19,0:19:48.16:0,48,1246	0/0:9,0:9:24.08:0,24,613	0/0:40,0:40:99:0,105,2728	0/0:34,0:34:99:0,99,2516	0/0:37,0:38:90.10:0,90,2256	0/0:37,0:37:99:0,102,2605	0/0:46,0:45:99:0,129,3323	0/0:21,0:21:60.19:0,60,1495	0/0:15,0:15:42.14:0,42,1082	0/0:20,0:20:51.17:0,51,1240	0/0:19,0:19:45.15:0,45,1159	0/0:40,0:40:93.14:0,93,2383	0/0:18,0:18:39.12:0,39,921	0/0:9,0:9:21.07:0,21,545	0/0:43,0:43:99:0,117,2845	0/0:15,0:15:39.13:0,39,995	0/0:27,0:27:51.18:0,51,1322	0/0:11,0:11:30.10:0,30,779	0/0:7,0:7:21.07:0,21,516
chr10	15663808	.	C	CCTTT	4161.86	PASS	AB=0.602;AC=29;AF=0.518;AN=56;BaseQRankSum=6.342;DP=533;FS=1.348;HRun=0;HaplotypeScore=100.9996;InbreedingCoeff=-0.4882;MQ=66.41;MQ0=5;MQRankSum=-6.083;QD=8.56;ReadPosRankSum=3.041;VQSLOD=2.5020;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:8,1:33:19.40:532,0,19	1/1:2,0:4:5.97:59,6,0	0/0:15,0:9:26.97:0,27,296	0/0:14,0:12:16.83:0,17,314	0/1:11,0:30:32.22:457,0,32	0/1:4,0:23:28.65:161,0,29	0/1:7,0:18:73.17:73,0,104	0/1:12,0:31:99:193,0,193	0/1:2,0:9:12.25:12,0,21	0/1:16,0:27:99:202,0,106	0/1:4,0:16:34.48:125,0,34	0/1:6,1:14:52.81:53,0,93	1/1:2,0:19:7.75:238,8,0	0/1:5,0:14:48.67:64,0,49	0/1:4,0:17:36.31:157,0,36	0/1:16,0:20:99:322,0,105	0/1:6,0:25:89.16:124,0,89	0/1:11,0:30:99:301,0,118	0/1:7,0:19:15.68:16,0,195	0/1:2,0:15:9.63:10,0,62	0/0:4,0:18:20.22:0,20,115	1/1:2,0:5:10.96:83,11,0	0/1:6,0:13:78.63:79,0,98	0/1:3,0:16:29.54:177,0,30	0/1:5,0:19:4.50:190,0,5	0/1:10,0:28:70.83:308,0,71	0/1:2,0:18:6:99,0,6	1/1:5,0:16:15.53:127,16,0
chr10	15664282	.	T	TA	3831.14	PASS	AB=1.000;AC=27;AF=0.500;AN=54;BaseQRankSum=-7.175;DP=415;FS=8.986;HRun=11;HaplotypeScore=43.7467;InbreedingCoeff=0.8266;MQ=55.24;MQ0=16;MQRankSum=0.561;QD=18.42;ReadPosRankSum=0.272;VQSLOD=4.1952;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,1:21:22.24:0,22,337	1/1:0,5:5:15.03:151,15,0	0/0:9,0:4:0.26:0,0,23	0/0:12,0:5:11.95:0,12,93	0/0:17,0:19:46.81:0,47,346	0/0:28,0:28:75.17:0,75,578	./.	1/1:11,24:29:60.07:585,60,0	1/1:3,4:6:6.01:60,6,0	1/1:4,12:16:27.05:274,27,0	1/1:3,16:19:41.42:412,41,0	0/0:14,0:13:32.83:0,33,255	1/1:2,3:4:9.02:91,9,0	1/1:0,6:6:15.03:152,15,0	0/0:12,0:12:29.85:0,30,230	0/0:14,0:14:25.11:0,25,244	1/1:10,27:34:2.45:563,2,0	0/0:23,0:22:59.73:0,60,458	0/0:18,0:18:41.74:0,42,322	0/0:14,0:14:41.82:0,42,321	0/0:8,0:8:23.91:0,24,186	0/1:4,0:4:14.95:15,0,36	1/1:1,6:7:17.95:169,18,0	1/1:1,6:7:12.02:122,12,0	0/0:13,0:14:28.87:0,29,209	1/1:2,15:17:39.08:396,39,0	1/1:4,20:23:54.08:538,54,0	1/1:2,15:16:32.77:303,33,0
chr10	15665124	.	GCC	G	2226.59	PASS	AB=1.000;AC=25;AF=0.446;AN=56;BaseQRankSum=-0.532;DP=476;FS=6.348;HRun=5;HaplotypeScore=76.5351;InbreedingCoeff=0.8690;MQ=59.05;MQ0=21;MQRankSum=-0.670;QD=11.48;ReadPosRankSum=2.217;VQSLOD=-0.2884;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:36.34:0,36,478	1/1:10,0:10:5.65:47,6,0	0/0:30,0:16:31.52:0,32,280	0/0:29,0:12:16.18:0,16,241	0/0:7,0:6:11.99:0,12,103	0/0:5,0:4:11.74:0,12,90	0/0:20,0:20:41.48:0,41,344	1/1:6,10:14:10.33:136,10,0	1/1:11,1:12:14.54:102,15,0	1/1:25,1:24:59.20:592,59,0	1/1:6,1:7:5.52:42,6,0	0/0:29,0:29:57.41:0,57,594	1/1:17,2:18:26.94:234,27,0	1/1:22,0:22:52.66:415,53,0	0/0:24,0:22:53.77:0,54,484	0/0:24,0:23:54:0,54,501	1/1:16,1:16:29.73:237,30,0	0/0:15,0:15:42.03:0,42,472	0/0:19,0:19:53.67:0,54,435	0/0:4,0:3:6:0,6,54	0/0:23,0:20:44.57:0,45,395	0/0:8,0:7:12.41:0,12,124	1/1:13,0:12:8.99:75,9,0	1/1:20,2:22:12.14:106,12,0	0/0:18,0:17:37.37:0,37,329	1/1:11,1:12:24.95:257,25,0	1/1:10,0:10:19.61:132,20,0	0/1:8,0:6:3.11:68,0,3
chr10	15665162	.	C	CTG	1500.33	PASS	AB=0.904;AC=23;AF=0.411;AN=56;BaseQRankSum=3.922;DP=554;FS=17.367;HRun=0;HaplotypeScore=96.7329;InbreedingCoeff=0.1097;MQ=61.17;MQ0=14;MQRankSum=1.560;QD=4.48;ReadPosRankSum=4.619;VQSLOD=0.9447;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:38,2:40:3.08:156,0,3	0/0:3,0:3:2.99:0,3,23	0/0:20,0:8:17.64:0,18,135	0/0:44,0:19:11.91:0,12,144	0/0:10,0:9:11.97:0,12,96	0/0:9,0:8:8.91:0,9,63	0/0:25,0:25:26.90:0,27,213	0/1:23,0:21:99:119,0,173	1/1:15,0:15:2.04:6,2,0	0/1:24,0:23:80.02:80,0,344	1/1:16,0:16:7.91:24,8,0	1/1:10,19:30:9.21:187,9,0	0/1:22,0:22:22.56:23,0,30	0/0:20,0:20:0.71:0,1,81	1/1:26,0:25:3.71:68,4,0	1/1:17,1:16:8.09:263,8,0	0/1:25,0:25:54.79:55,0,86	0/1:8,15:23:34.18:86,0,34	0/0:21,0:20:19.71:0,20,252	0/0:7,0:7:8.75:0,9,50	0/0:21,0:20:0.36:0,0,2	0/1:3,8:10:10.17:67,0,10	0/0:15,0:14:2.46:0,2,23	0/0:24,0:24:3:0,3,26	1/1:22,0:21:3.55:400,4,0	0/1:15,0:15:77.53:78,0,213	0/1:11,0:11:8.51:9,0,23	1/1:14,0:14:4.89:42,5,0
chr10	15665164	.	C	CTG	1480.14	PASS	AB=0.964;AC=28;AF=0.500;AN=56;BaseQRankSum=3.989;DP=554;FS=8.969;HRun=0;HaplotypeScore=99.8486;InbreedingCoeff=-0.2031;MQ=62.38;MQ0=14;MQRankSum=-0.260;QD=3.54;ReadPosRankSum=3.460;VQSLOD=1.6162;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:36,4:40:27.98:91,0,28	0/1:4,0:4:0.01:0,0,0	0/1:21,0:9:2.55:3,0,61	0/0:44,0:20:4.55:0,5,111	0/0:10,0:9:11.69:0,12,71	0/0:9,0:8:8.79:0,9,52	0/0:26,0:26:26.34:0,26,153	0/1:23,0:21:99:139,0,156	1/1:16,0:16:2.04:6,2,0	0/1:23,0:22:99:110,0,242	1/1:16,0:16:7.87:24,8,0	1/1:26,4:31:6.22:269,6,0	0/1:20,0:20:22.75:23,0,29	0/1:17,0:17:3.25:3,0,55	0/1:23,2:24:39.43:91,0,39	0/1:11,8:17:13.47:176,0,13	0/1:23,0:23:60.03:61,0,60	0/1:21,2:23:19.85:197,0,20	0/1:20,0:19:81.56:93,0,82	1/1:7,0:7:8.77:71,9,0	0/0:23,0:22:0.37:0,0,2	0/1:12,0:11:9.04:9,0,40	1/1:16,0:14:0.42:1,0,0	0/0:24,0:24:2.96:0,3,19	0/1:23,1:23:26.74:118,0,27	0/1:14,0:14:82.04:82,0,157	0/1:10,0:10:11.01:11,0,18	1/1:13,0:14:7.06:54,7,0
chr10	15665166	.	C	CTGTGTGT	1173.61	PASS	AB=0.888;AC=19;AF=0.339;AN=56;BaseQRankSum=0.150;DP=554;FS=1.267;HRun=0;HaplotypeScore=126.9974;InbreedingCoeff=0.3226;MQ=63.71;MQ0=11;MQRankSum=-2.912;QD=5.10;ReadPosRankSum=0.219;VQSLOD=2.5773;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:8.89:0,9,185	0/0:4,0:4:2.36:0,2,8	0/0:22,0:10:17.98:0,18,364	0/0:43,0:20:25.52:0,26,483	0/0:10,0:9:13.52:0,14,65	0/0:9,0:8:8.72:0,9,57	0/0:25,0:25:27.97:0,28,129	0/1:25,0:23:99:153,0,219	0/1:3,0:17:0:0,0,0	0/1:22,0:21:99:171,0,226	0/0:4,0:15:0:0,0,0	0/0:31,0:31:20.42:0,20,249	0/1:20,0:20:30.35:121,0,30	1/1:15,0:17:12.68:163,13,0	0/0:26,0:25:17.17:0,17,193	0/0:16,0:15:32.57:0,33,429	0/1:23,0:23:46.33:55,0,46	0/0:24,0:24:26.30:0,26,242	0/1:20,0:19:99:140,0,170	1/1:8,0:8:8.64:57,9,0	0/0:24,0:23:8.90:0,9,60	0/0:11,0:11:14.85:0,15,222	1/1:15,0:14:0.04:1,0,0	1/1:24,0:24:3.07:20,3,0	0/0:23,0:22:54.13:0,54,755	0/1:8,1:16:99:160,0,130	1/1:9,0:10:8.68:134,9,0	1/1:13,0:13:9.03:163,9,0
chr10	15665168	.	C	CTGTGTGTG	6388.30	PASS	AB=0.722;AC=42;AF=0.750;AN=56;BaseQRankSum=-3.707;DP=584;FS=0.787;HRun=0;HaplotypeScore=130.7025;InbreedingCoeff=0.3408;MQ=63.29;MQ0=9;MQRankSum=-4.432;QD=12.98;ReadPosRankSum=0.118;VQSLOD=3.7610;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:7,0:44:4.93:148,5,0	1/1:5,0:5:6:67,6,0	0/0:22,0:10:21.03:0,21,366	0/0:42,0:21:25.29:0,25,450	1/1:9,0:8:6.14:53,6,0	1/1:9,0:8:1.12:3,1,0	1/1:25,0:25:18.22:186,18,0	1/1:32,0:30:80.87:1499,81,0	1/1:18,0:18:3.01:73,3,0	1/1:6,17:23:53.59:960,54,0	0/0:16,0:16:0:0,0,0	0/1:26,0:30:21.07:74,0,21	1/1:4,17:21:12.38:279,12,0	1/1:6,10:18:7.27:194,7,0	0/1:5,0:26:19.44:19,0,114	0/1:14,0:16:8.51:104,0,9	1/1:3,20:28:9.94:204,10,0	1/1:21,0:23:15.17:133,15,0	1/1:8,0:21:53.88:828,54,0	1/1:10,0:10:15.02:191,15,0	1/1:10,0:26:2.36:13,2,0	0/0:11,0:11:6.69:0,7,43	0/1:0,14:14:0.01:1,0,0	0/1:8,0:25:0.01:0,0,0	0/1:20,0:21:46.80:54,0,47	1/1:15,0:15:38.78:666,39,0	1/1:3,9:13:5.81:223,6,0	1/1:3,11:14:12.04:417,12,0
chr10	15666779	.	CCCCA	C	3465.73	PASS	AB=1.000;AC=32;AF=0.571;AN=56;BaseQRankSum=5.076;DP=462;FS=69.245;HRun=0;HaplotypeScore=112.5878;InbreedingCoeff=0.4680;MQ=79.54;MQ0=0;MQRankSum=-4.266;QD=9.90;ReadPosRankSum=5.433;VQSLOD=-0.1297;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:26:49.48:49,0,305	1/1:5,1:6:11.82:110,12,0	0/0:15,0:15:36.02:0,36,785	0/0:18,0:16:35.99:0,36,737	0/1:10,0:10:8.26:8,0,196	0/0:3,0:3:8.97:0,9,98	0/1:19,0:19:40.25:40,0,69	1/1:16,0:16:32.50:248,32,0	1/1:30,0:30:58.68:328,59,0	1/1:19,1:20:49.95:351,50,0	1/1:10,0:10:20.33:112,20,0	0/0:26,0:26:3.99:0,4,421	1/1:17,3:20:43.73:363,44,0	1/1:21,0:21:43.60:246,44,0	0/0:22,0:22:9.70:0,10,552	0/0:15,0:15:22.46:0,22,325	1/1:39,1:40:90.57:568,91,0	0/1:22,0:22:27.32:27,0,339	0/0:2,0:2:6.02:0,6,103	0/0:3,0:3:6.44:0,6,55	0/1:18,0:18:71.03:71,0,121	0/1:7,0:7:10.76:11,0,153	1/1:11,0:11:14.57:82,15,0	1/1:36,0:36:59.34:336,59,0	0/0:8,0:8:0:0,0,0	1/1:16,1:17:44.02:304,44,0	1/1:14,0:14:22.30:130,22,0	1/1:7,0:7:14.51:80,15,0
chr10	15666780	.	CCCA	C	8490.27	PASS	AB=1.000;AC=35;AF=0.625;AN=56;BaseQRankSum=-7.605;DP=455;FS=54.902;HRun=0;HaplotypeScore=86.5723;InbreedingCoeff=0.2207;MQ=79.80;MQ0=0;MQRankSum=-5.811;QD=21.49;ReadPosRankSum=3.153;VQSLOD=2.5433;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:27:84.33:99,0,84	1/1:1,3:4:12.04:168,12,0	0/0:16,0:16:31.12:0,31,627	0/0:17,0:15:29.24:0,29,584	0/1:9,0:9:8.84:9,0,118	0/0:3,0:3:5.61:0,6,48	0/1:20,0:20:34.41:66,0,34	1/1:5,11:16:35.90:400,36,0	1/1:1,29:30:60.47:925,60,0	1/1:6,13:19:51.15:756,51,0	1/1:0,10:10:21.07:343,21,0	0/1:25,0:25:99:101,0,196	1/1:5,14:19:45.02:683,45,0	1/1:6,15:21:45.05:695,45,0	0/1:22,0:22:6.68:7,0,266	0/0:14,0:14:0.08:0,0,180	1/1:7,32:39:93.14:1449,93,0	0/1:23,0:23:99:119,0,162	0/0:2,0:2:6.02:0,6,74	0/1:3,0:3:13.32:13,0,14	0/1:17,0:17:38.33:104,0,38	0/1:6,0:6:10.86:11,0,94	1/1:2,9:11:15.03:248,15,0	1/1:5,31:36:63.42:1003,63,0	0/0:8,0:8:0:0,0,0	1/1:3,14:17:48.07:666,48,0	1/1:3,11:14:27.35:410,27,0	1/1:2,5:7:14.94:215,15,0
chr10	15666781	.	CCA	C	5565.98	PASS	AB=1.000;AC=41;AF=0.732;AN=56;BaseQRankSum=1.273;DP=449;FS=28.422;HRun=0;HaplotypeScore=89.4658;InbreedingCoeff=0.2197;MQ=80.07;MQ0=0;MQRankSum=-4.569;QD=13.44;ReadPosRankSum=0.934;VQSLOD=2.5644;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:26:17.73:307,18,0	1/1:4,0:4:11.96:94,12,0	0/0:16,0:16:26.92:0,27,497	0/0:17,0:15:29.21:0,29,486	0/1:10,0:10:41.47:41,0,49	0/1:3,0:3:12.35:18,0,12	0/1:21,0:21:2.54:72,0,3	1/1:14,1:15:35.81:274,36,0	1/1:30,0:30:59.82:489,60,0	1/1:18,0:18:50.95:431,51,0	1/1:10,0:10:20.97:179,21,0	0/1:24,0:24:44.08:210,0,44	1/1:17,2:19:44.93:373,45,0	1/1:16,5:21:44.93:390,45,0	0/1:22,0:22:67.34:146,0,67	0/1:14,0:14:10.83:11,0,63	1/1:34,5:39:92.73:761,93,0	1/1:21,0:21:0.68:152,1,0	0/0:2,0:2:5.95:0,6,42	1/1:3,0:3:2.22:39,2,0	0/1:18,0:18:1.93:170,0,2	0/1:7,0:7:15.27:15,0,37	1/1:10,0:10:14.74:125,15,0	1/1:33,2:35:63.06:517,63,0	0/1:8,0:8:0:0,0,0	1/1:15,1:16:47.89:389,48,0	1/1:11,3:14:27.45:245,27,0	1/1:6,0:6:14.91:117,15,0
chr10	15666782	.	CA	C	5805.54	PASS	AB=1.000;AC=49;AF=0.875;AN=56;BaseQRankSum=0.121;DP=447;FS=6.141;HRun=1;HaplotypeScore=84.8589;InbreedingCoeff=0.5184;MQ=78.43;MQ0=0;MQRankSum=-5.155;QD=13.82;ReadPosRankSum=-0.686;VQSLOD=3.5403;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:25,2:27:52.77:474,53,0	1/1:4,0:4:11.80:75,12,0	0/1:14,0:14:14.89:15,0,360	0/0:17,0:15:30.12:0,30,396	1/1:10,0:10:4.10:82,4,0	1/1:3,0:3:6.92:40,7,0	1/1:22,0:22:20.36:162,20,0	1/1:12,2:14:35.58:242,36,0	1/1:30,0:30:59.06:379,59,0	1/1:20,0:20:50.43:369,50,0	1/1:10,0:10:20.65:131,21,0	1/1:22,1:23:37.63:403,38,0	1/1:19,0:19:44.28:286,44,0	1/1:20,0:20:44.27:292,44,0	1/1:21,1:22:40.12:352,40,0	1/1:15,0:15:10.51:98,11,0	1/1:39,0:39:91.53:591,92,0	1/1:22,0:22:53.07:415,53,0	0/0:2,0:2:1.37:0,1,3	1/1:3,0:3:8.45:54,8,0	1/1:17,0:17:25.73:205,26,0	1/1:7,0:7:4.30:50,4,0	1/1:10,0:10:14.78:95,15,0	1/1:33,0:33:61.86:403,62,0	0/0:0,8:8:0:0,0,0	1/1:16,0:16:47.42:325,47,0	1/1:14,0:14:26.63:175,27,0	1/1:5,1:6:14.77:94,15,0
chr10	15668372	.	TTAC	T	12512.66	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=10.242;DP=729;FS=8.383;HRun=0;HaplotypeScore=120.4166;InbreedingCoeff=0.9998;MQ=82.82;MQ0=0;MQRankSum=-6.424;QD=40.76;ReadPosRankSum=4.296;VQSLOD=6.3083;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,159,3542	1/1:1,13:14:33.11:561,33,0	0/0:32,0:32:87.30:0,87,1938	0/0:13,0:13:30.56:0,31,627	0/0:21,0:20:54.19:0,54,1193	0/0:31,0:31:93.30:0,93,2006	0/0:32,0:32:93.32:0,93,2124	1/1:3,25:28:75.23:1195,75,0	1/1:2,28:30:75.26:1276,75,0	1/1:0,19:19:57.17:906,57,0	1/1:0,14:14:30.10:508,30,0	0/0:34,0:34:99:0,102,2253	1/1:1,27:28:69.07:1173,69,0	1/1:0,32:32:78.27:1323,78,0	0/0:35,0:35:99:0,102,2253	0/0:28,0:28:78.27:0,78,1798	1/1:2,28:30:57.20:972,57,0	0/0:26,0:26:78.27:0,78,1791	0/0:29,0:29:75.26:0,75,1696	0/0:15,0:15:42.14:0,42,932	0/0:34,0:34:93.32:0,93,2140	0/0:21,0:21:63.22:0,63,1426	1/1:1,20:21:45.15:761,45,0	1/1:0,40:40:89.90:1535,90,0	0/0:18,0:18:54.19:0,54,1225	1/1:1,17:18:48.16:818,48,0	1/1:0,13:13:33.11:561,33,0	1/1:0,20:20:54.18:921,54,0
chr10	15668600	.	A	AAAT	17543.69	PASS	AB=0.615;AC=37;AF=0.661;AN=56;BaseQRankSum=-2.939;DP=560;FS=10.381;HRun=0;HaplotypeScore=70.6587;InbreedingCoeff=0.8976;MQ=46.53;MQ0=7;MQRankSum=-14.354;QD=57.71;ReadPosRankSum=-2.789;VQSLOD=5.2279;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:47:99:0,132,2461	1/1:1,6:9:21.07:514,21,0	0/0:38,0:11:30.10:0,30,532	0/0:27,0:3:6.02:0,6,112	1/1:2,22:24:63.17:1352,63,0	1/1:4,15:21:45.15:1106,45,0	1/1:3,8:10:27.09:647,27,0	1/1:6,17:22:63.22:1551,63,0	1/1:3,17:21:51.18:1254,51,0	1/1:2,9:13:36.11:800,36,0	1/1:0,22:23:57.15:1308,57,0	0/0:20,0:20:60.19:0,60,1085	1/1:3,16:19:51.18:1252,51,0	1/1:0,20:22:48.16:1180,48,0	0/0:33,0:33:99:0,99,1835	0/0:24,0:24:72.25:0,72,1334	1/1:0,13:13:36.12:883,36,0	0/0:27,0:27:75.22:0,75,1350	1/1:5,7:13:33.11:778,33,0	1/1:1,13:15:42.10:953,42,0	1/1:1,8:9:11.99:234,12,0	0/0:19,0:19:51.17:0,51,928	1/1:2,7:12:24.08:583,24,0	0/1:3,4:8:40.92:227,0,41	0/0:21,0:21:63.22:0,63,1163	1/1:0,10:11:27.09:636,27,0	1/1:5,22:27:69.24:1697,69,0	1/1:1,8:9:24.08:590,24,0
chr10	15668707	.	TAAA	T	3580.84	PASS	AB=0.667;AC=39;AF=0.696;AN=56;BaseQRankSum=-2.650;DP=418;FS=0.000;HRun=16;HaplotypeScore=68.6481;InbreedingCoeff=0.6747;MQ=49.40;MQ0=12;MQRankSum=-2.655;QD=11.86;ReadPosRankSum=1.493;VQSLOD=0.4875;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:26:10.79:0,11,58	1/1:2,2:4:2.87:32,3,0	0/0:2,0:1:0.89:0,1,2	0/0:2,0:1:3.01:0,3,46	1/1:6,0:24:29.07:176,29,0	1/1:8,0:18:29.26:176,29,0	1/1:2,0:7:5.86:35,6,0	1/1:15,17:29:41.19:388,41,0	1/1:2,7:9:8.96:97,9,0	1/1:7,8:14:20.92:226,21,0	1/1:5,7:12:8.67:82,9,0	0/1:3,0:6:1.65:24,0,2	1/1:9,7:16:23.64:229,24,0	1/1:3,9:12:20.95:226,21,0	0/0:2,0:18:14.95:0,15,33	0/0:6,0:15:11.69:0,12,40	1/1:6,13:19:38.90:418,39,0	0/0:12,1:26:5.28:0,5,155	1/1:8,0:16:20.93:124,21,0	1/1:1,0:16:20.36:123,20,0	1/1:2,0:3:2.89:18,3,0	0/0:4,0:5:0:0,0,0	1/1:2,5:7:8.96:97,9,0	1/1:2,3:5:5.90:64,6,0	0/0:5,0:17:14.63:0,15,58	1/1:8,12:18:26.83:290,27,0	1/1:12,18:29:7:467,7,0	1/1:10,10:20:25.25:288,25,0
chr10	15670445	.	G	GA	674.49	PASS	AB=0.989;AC=8;AF=0.143;AN=56;BaseQRankSum=6.919;DP=587;FS=11.461;HRun=9;HaplotypeScore=75.7148;InbreedingCoeff=0.6277;MQ=56.14;MQ0=74;MQRankSum=-6.387;QD=4.44;ReadPosRankSum=-3.091;VQSLOD=-0.4478;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:34:83.91:0,84,722	0/0:9,0:8:17.99:0,18,156	0/1:49,0:8:5.34:5,0,41	0/1:41,1:11:20.15:20,0,61	0/0:20,0:18:38.56:0,39,333	0/0:16,0:13:35.99:0,36,312	0/0:28,0:22:47.99:0,48,416	0/0:20,0:20:38.96:0,39,336	0/0:10,0:10:26.99:0,27,234	0/0:24,0:20:41.91:0,42,364	0/0:15,0:14:29.96:0,30,260	0/0:20,1:21:14.78:0,15,353	0/0:16,0:16:38.99:0,39,339	0/0:16,0:16:35.98:0,36,312	0/0:17,0:16:29.96:0,30,257	0/0:16,0:16:38.99:0,39,338	0/0:35,0:35:89.48:0,89,780	0/0:22,0:21:44.94:0,45,386	1/1:13,6:12:2.16:209,2,0	1/1:10,15:23:18.86:399,19,0	1/1:7,7:11:20.91:180,21,0	0/0:9,0:8:17.97:0,18,153	0/0:10,0:9:20.02:0,20,162	0/0:26,1:27:29.50:0,30,487	0/0:6,0:7:17:0,17,131	0/0:28,0:22:56.97:0,57,494	0/0:29,0:28:68.94:0,69,594	0/0:2,0:2:6:0,6,52
chr10	15670463	.	GA	G	872.05	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=6.783;DP=562;FS=6.876;HRun=10;HaplotypeScore=69.8491;InbreedingCoeff=0.9776;MQ=66.53;MQ0=7;MQRankSum=-6.015;QD=18.55;ReadPosRankSum=-0.399;VQSLOD=4.0803;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,1:43:88.22:0,88,1181	0/0:11,0:11:24.06:0,24,266	0/0:28,0:11:21.24:0,21,230	0/0:25,0:14:17.93:0,18,175	0/0:20,0:20:60.10:0,60,640	0/0:17,0:17:39.09:0,39,423	0/0:21,0:20:51.11:0,51,547	0/0:30,1:31:43.59:0,44,691	0/0:11,0:11:33.07:0,33,351	0/0:26,0:26:63.17:0,63,697	0/0:16,0:17:47.95:0,48,505	0/0:19,0:19:48.12:0,48,524	0/0:13,0:13:33.09:0,33,365	0/0:17,0:17:51.14:0,51,564	0/0:15,0:15:45.12:0,45,498	0/0:15,0:15:42.10:0,42,450	0/0:34,1:35:64.19:0,64,935	0/0:19,0:19:45.12:0,45,498	1/1:0,16:16:47.98:414,48,0	1/1:3,19:22:56.97:494,57,0	1/1:3,6:9:11.99:104,12,0	0/0:14,0:14:36.10:0,36,397	0/0:12,0:12:33.09:0,33,365	0/0:29,1:30:55.64:0,56,835	0/0:14,0:14:33.09:0,33,365	0/0:25,1:26:41.89:0,42,661	0/0:30,0:30:75.19:0,75,820	0/0:5,0:5:15.01:0,15,149
chr10	15671711	.	CAA	C	1260.53	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=6.512;DP=490;FS=3.604;HRun=10;HaplotypeScore=69.4801;InbreedingCoeff=0.8350;MQ=70.34;MQ0=3;MQRankSum=0.487;QD=18.81;ReadPosRankSum=-0.411;VQSLOD=2.5232;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:87.25:0,87,1330	0/0:9,0:9:27.09:0,27,424	0/1:16,0:10:17.50:17,0,57	0/0:19,0:19:26.11:0,26,424	0/0:4,0:22:37.16:0,37,443	0/0:4,0:12:24.04:0,24,229	0/0:3,0:12:21:0,21,203	0/0:30,0:30:69.22:0,69,1037	0/0:12,0:12:33.10:0,33,499	0/0:15,0:15:42.14:0,42,653	0/0:9,0:9:21.07:0,21,330	0/0:18,0:18:51.16:0,51,786	0/0:12,0:12:30.10:0,30,471	0/0:11,0:11:33.10:0,33,502	0/0:13,0:13:36.11:0,36,550	0/0:18,0:18:51.16:0,51,785	0/0:38,0:38:99:0,105,1616	0/0:23,0:23:60.20:0,60,951	1/1:3,15:18:41.62:455,42,0	1/1:2,17:19:48.11:535,48,0	1/1:0,14:14:36.10:401,36,0	0/0:16,0:16:45.15:0,45,707	0/0:10,0:10:30.06:0,30,417	0/0:12,0:12:33.11:0,33,520	0/0:18,0:18:51.11:0,51,739	0/0:24,0:26:71.19:0,71,1004	0/0:19,0:20:57.19:0,57,871	0/0:12,0:12:30.10:0,30,470
chr10	15672231	.	CCTCTCT	C	74.17	PASS	AB=0.950;AC=7;AF=0.194;AN=36;BaseQRankSum=3.334;DP=501;FS=2.449;HRun=0;HaplotypeScore=113.6163;InbreedingCoeff=0.2660;MQ=51.12;MQ0=27;MQRankSum=-3.027;QD=1.03;ReadPosRankSum=-0.975;VQSLOD=2.2969;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:5,0:5:3.01:0,3,50	./.	./.	./.	0/0:15,0:15:6.02:0,6,100	1/1:18,0:17:0.68:2,1,0	./.	0/0:19,0:21:15.52:0,16,243	0/0:20,0:20:10.58:0,11,173	0/0:12,0:12:3:0,3,25	0/1:18,0:19:32.88:33,0,36	0/0:9,0:8:5.98:0,6,70	0/0:16,0:16:3:0,3,25	./.	1/1:14,4:18:3.01:56,3,0	0/0:12,0:11:11.98:0,12,230	1/1:11,0:16:5.05:82,5,0	0/0:15,0:15:18.06:0,18,350	0/0:18,0:18:3.01:0,3,57	./.	./.	0/0:20,0:19:6.02:0,6,91	0/0:18,0:17:3.01:0,3,43	./.	0/0:12,0:12:8.96:0,9,86	0/0:23,0:27:4.99:0,5,48	./.
chr10	15672652	.	A	AT	12212.14	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-16.325;DP=678;FS=14.975;HRun=1;HaplotypeScore=64.0228;InbreedingCoeff=0.9985;MQ=88.18;MQ0=0;MQRankSum=-2.207;QD=41.54;ReadPosRankSum=1.321;VQSLOD=3.7741;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,117,1486	1/1:1,6:7:18.06:270,18,0	0/0:33,0:34:85.56:0,86,1064	0/0:25,0:25:66.21:0,66,851	0/0:24,0:24:69.21:0,69,881	0/0:21,0:21:60.19:0,60,779	0/0:24,0:24:69.22:0,69,896	1/1:3,22:25:66.21:964,66,0	1/1:1,20:21:54.18:809,54,0	1/1:2,22:24:69.21:1001,69,0	1/1:0,14:14:36.12:539,36,0	0/0:32,0:32:96.31:0,96,1245	1/1:1,25:26:75.25:1123,75,0	1/1:0,24:24:69.21:1033,69,0	0/0:20,0:20:60.20:0,60,779	0/0:25,0:25:75.24:0,75,974	1/1:2,34:36:99:1573,105,0	0/0:28,0:28:78.25:0,78,1013	0/0:27,0:27:81.23:0,81,1034	0/0:23,0:23:69.21:0,69,882	0/0:33,0:33:99:0,99,1285	0/0:9,0:9:27.05:0,27,332	1/1:0,18:18:54.18:809,54,0	1/1:0,32:32:90.30:1349,90,0	0/0:20,0:20:60.12:0,60,717	1/1:0,26:26:78.25:1150,78,0	1/1:0,31:31:84.28:1258,84,0	1/1:2,8:10:24.01:332,24,0
chr10	15672900	.	CT	C	2331.47	PASS	AB=0.828;AC=17;AF=0.304;AN=56;BaseQRankSum=-7.032;DP=445;FS=1.949;HRun=11;HaplotypeScore=63.2630;InbreedingCoeff=0.5542;MQ=69.88;MQ0=2;MQRankSum=1.136;QD=12.34;ReadPosRankSum=2.900;VQSLOD=3.6169;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,38:44:99:843,104,0	0/0:5,0:5:12.03:0,12,128	0/0:11,0:7:8.79:0,9,63	0/0:9,0:7:8.38:0,8,63	0/0:8,0:26:68.02:0,68,436	0/0:6,0:24:44.27:0,44,242	0/0:0,0:7:14.24:0,14,71	0/0:27,1:28:44.53:0,45,679	0/1:5,1:7:9.77:10,0,95	0/0:14,0:15:32.92:0,33,334	0/0:16,0:16:27.05:0,27,279	1/1:2,15:17:38.94:320,39,0	0/0:15,0:15:39.10:0,39,415	0/1:14,1:15:6.55:7,0,142	0/1:3,9:12:11.03:127,0,11	1/1:1,13:15:6.01:245,6,0	0/0:25,1:26:35.63:0,36,566	1/1:5,21:26:59.92:493,60,0	0/0:13,0:13:33.36:0,33,329	0/1:14,2:16:7.18:7,0,342	0/1:10,2:13:25.40:25,0,150	1/1:1,8:9:23.97:197,24,0	0/0:6,0:6:15.04:0,15,160	0/0:13,0:13:33.08:0,33,352	1/1:3,12:15:10.56:246,11,0	0/0:12,1:16:10.34:0,10,318	0/0:15,0:15:36.08:0,36,378	0/0:8,0:9:17.88:0,18,174
chr10	15673125	.	TTG	T	2386.36	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=6.004;DP=547;FS=2.666;HRun=0;HaplotypeScore=102.6305;InbreedingCoeff=0.6883;MQ=61.15;MQ0=17;MQRankSum=-3.695;QD=8.52;ReadPosRankSum=-3.546;VQSLOD=2.3796;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:39:77.34:0,77,795	1/1:5,0:4:5.84:42,6,0	0/0:26,0:16:21.08:0,21,281	0/0:23,0:14:11.36:0,11,244	0/0:21,0:21:60.10:0,60,766	0/0:18,0:17:37.32:0,37,623	0/0:25,0:25:71.86:0,72,1055	1/1:30,2:31:45.17:412,45,0	0/1:10,0:10:19.87:69,0,20	1/1:19,0:19:35.51:262,36,0	1/1:14,0:13:28.24:152,28,0	0/0:18,0:18:8.09:0,8,260	1/1:13,0:13:5.72:29,6,0	1/1:13,0:12:9.01:177,9,0	0/0:24,0:24:56.52:0,57,499	0/0:19,0:19:38.49:0,38,411	1/1:29,2:29:55.60:399,56,0	0/0:24,0:20:57.02:0,57,558	0/1:23,0:23:0.56:94,0,1	0/1:18,0:18:21.42:30,0,21	1/1:22,0:21:4.84:73,5,0	0/0:8,0:8:21.04:0,21,215	1/1:9,0:9:2.93:130,3,0	1/1:20,1:19:28.14:206,28,0	0/0:19,0:19:41.18:0,41,470	1/1:26,2:27:7.14:345,7,0	1/1:14,2:15:17.20:156,17,0	1/1:6,0:4:2.88:15,3,0
chr10	15673126	.	TG	T	5480.57	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=3.169;DP=543;FS=1.157;HRun=1;HaplotypeScore=83.8786;InbreedingCoeff=0.9076;MQ=61.15;MQ0=16;MQRankSum=-3.100;QD=19.79;ReadPosRankSum=-3.143;VQSLOD=4.1384;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:37:75.77:0,76,505	1/1:1,3:3:6.02:82,6,0	0/0:25,0:16:20.97:0,21,229	0/0:23,0:14:15.91:0,16,211	0/0:21,0:21:59.90:0,60,607	0/0:18,0:17:26.83:0,27,460	0/0:26,0:26:69.42:0,69,803	1/1:15,17:31:62.78:738,63,0	1/1:3,7:10:1.71:231,2,0	1/1:9,10:19:51.54:591,52,0	1/1:1,12:12:32.77:373,33,0	0/0:18,0:18:11.90:0,12,165	1/1:0,13:13:6.02:77,6,0	1/1:10,3:12:24.02:263,24,0	0/0:25,0:25:54.62:0,55,300	0/0:18,0:19:15.65:0,16,248	1/1:10,20:28:72.96:872,73,0	0/0:24,0:20:55.95:0,56,402	1/1:23,0:23:47.16:243,47,0	1/1:18,0:18:30.93:163,31,0	1/1:22,0:21:45.54:227,46,0	0/0:8,0:8:20.47:0,20,132	1/1:8,1:9:24.75:225,25,0	1/1:14,7:19:34.52:362,35,0	0/0:19,0:19:45.19:0,45,328	1/1:16,11:26:56.99:701,57,0	1/1:3,13:15:26.89:291,27,0	1/1:3,4:4:3.01:41,3,0
chr10	15673127	.	G	GT	2579.18	PASS	AB=0.875;AC=18;AF=0.321;AN=56;BaseQRankSum=-9.494;DP=558;FS=0.906;HRun=11;HaplotypeScore=99.7591;InbreedingCoeff=0.3985;MQ=60.24;MQ0=16;MQRankSum=2.191;QD=10.57;ReadPosRankSum=1.493;VQSLOD=3.2036;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:19,26:41:63.74:794,64,0	0/0:4,0:3:3.11:0,3,8	0/0:24,0:15:5.85:0,6,42	0/1:22,0:14:26.87:27,0,36	0/0:19,1:20:8.29:0,8,248	0/0:16,0:17:43.16:0,43,316	0/0:24,1:26:37.02:0,37,451	0/0:32,0:31:21.71:0,22,68	0/0:10,0:10:13.28:0,13,51	0/1:19,0:19:12.11:12,0,39	0/0:14,0:13:13.79:0,14,47	1/1:4,14:18:35.86:341,36,0	0/0:13,0:13:3.37:0,3,9	0/0:15,0:14:9.45:0,9,37	1/1:1,24:26:54.11:548,54,0	1/1:6,12:19:6.33:297,6,0	0/0:30,0:28:27.80:0,28,88	0/1:12,12:20:10.40:269,0,10	0/0:21,0:23:36.18:0,36,187	0/0:17,0:18:37.33:0,37,203	0/0:21,0:21:41.81:0,42,213	1/1:2,8:10:15.03:151,15,0	0/1:10,0:10:10.12:13,0,10	0/1:20,0:18:15.86:16,0,16	0/1:6,14:21:27.79:276,0,28	0/0:27,0:26:28.75:0,29,117	0/0:17,0:16:14.15:0,14,43	1/1:9,0:6:0.40:15,0,0
chr10	15674101	.	CG	C	10541.28	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=14.989;DP=631;FS=0.000;HRun=2;HaplotypeScore=64.9857;InbreedingCoeff=0.9958;MQ=72.37;MQ0=0;MQRankSum=-0.348;QD=39.48;ReadPosRankSum=1.753;VQSLOD=5.2053;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,126,1995	1/1:0,7:7:18.06:252,18,0	0/0:10,0:10:30:0,30,371	0/0:9,0:9:26.08:0,26,344	0/0:23,0:23:66.21:0,66,1010	0/0:18,0:18:54.07:0,54,777	0/0:19,0:19:57.19:0,57,894	1/1:0,25:25:75.21:997,75,0	1/1:0,22:22:57.19:797,57,0	1/1:1,22:23:69.22:950,69,0	1/1:0,7:7:18.06:252,18,0	0/0:33,0:33:99:0,99,1547	1/1:0,34:34:99:1384,99,0	1/1:0,29:29:81.27:1133,81,0	0/0:28,0:28:84.29:0,84,1339	0/0:27,0:27:81.28:0,81,1279	1/1:0,29:29:84.28:1175,84,0	0/0:34,0:34:99:0,102,1600	0/0:18,0:18:54.16:0,54,835	0/0:14,0:14:39.13:0,39,622	0/0:63,0:63:99:0,187,2891	0/0:10,0:10:30.10:0,30,475	1/1:0,9:9:21.07:293,21,0	1/1:0,24:24:72.24:1007,72,0	0/0:16,0:16:45.15:0,45,716	1/1:0,31:31:93.31:1297,93,0	1/1:0,20:20:54.05:755,54,0	1/1:0,7:7:18.06:252,18,0
chr10	15674840	.	CAT	C	346.41	PASS	AB=1.000;AC=8;AF=0.143;AN=56;BaseQRankSum=5.339;DP=539;FS=16.840;HRun=0;HaplotypeScore=74.7049;InbreedingCoeff=0.6406;MQ=71.33;MQ0=13;MQRankSum=-1.263;QD=4.81;ReadPosRankSum=-0.089;VQSLOD=0.9028;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:21.60:0,22,242	0/0:11,0:11:25.88:0,26,176	0/0:41,0:21:52.92:0,53,528	0/0:41,0:22:62.68:0,63,589	0/0:16,0:16:34.54:0,35,229	0/0:13,0:13:13.14:0,13,138	0/0:21,0:21:30.92:0,31,291	0/0:23,0:23:58.85:0,59,495	0/1:10,0:10:17.55:18,0,96	0/0:20,0:20:50.94:0,51,459	0/0:6,0:6:7.16:0,7,92	0/0:24,0:24:53.99:0,54,577	0/0:23,0:23:40.61:0,41,411	0/0:18,0:18:22.08:0,22,294	0/0:17,0:17:37.01:0,37,583	0/0:10,0:10:7.51:0,8,194	0/0:36,0:36:39.73:0,40,512	0/0:23,0:23:54.84:0,55,635	1/1:10,0:10:28.77:201,29,0	1/1:11,0:11:23.07:172,23,0	1/1:2,27:28:6.02:94,6,0	0/0:13,0:13:31.09:0,31,334	0/0:7,0:6:11.02:0,11,80	0/0:38,0:37:54.14:0,54,543	0/0:21,0:21:47.21:0,47,581	0/0:17,0:16:35.75:0,36,292	0/1:12,0:12:5.59:6,0,121	0/0:6,0:5:11.95:0,12,92
chr10	15674841	.	ATG	A	814.89	PASS	AB=0.934;AC=29;AF=0.690;AN=42;BaseQRankSum=4.423;DP=550;FS=1.978;HRun=0;HaplotypeScore=74.6848;InbreedingCoeff=-0.2129;MQ=70.66;MQ0=13;MQRankSum=-0.013;QD=2.14;ReadPosRankSum=0.190;VQSLOD=1.2771;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:18,6:24:0.10:67,0,0	0/1:10,1:11:0:0,0,0	./.	./.	1/1:11,0:16:8.99:43,9,0	1/1:7,1:13:14.39:94,14,0	1/1:15,1:23:2.61:32,3,0	./.	1/1:6,3:10:11.86:110,12,0	0/0:19,0:19:2.92:0,3,17	1/1:6,0:6:3.01:32,3,0	0/1:24,2:26:25.48:25,0,173	0/1:23,0:23:30.70:55,0,31	0/1:16,2:18:2.27:56,0,2	0/1:16,0:16:8.16:8,0,273	0/1:10,1:11:23.22:23,0,59	0/1:31,4:36:2.56:135,0,3	0/1:22,2:24:11.23:11,0,199	./.	./.	1/1:29,0:28:6:54,6,0	0/1:13,0:13:9.55:10,0,104	1/1:8,0:7:2.96:19,3,0	0/1:33,4:37:7.53:58,0,8	0/1:22,2:24:9.36:9,0,228	./.	1/1:9,3:12:8.83:95,9,0	./.
chr10	15674894	.	CGCGT	C	2817.30	PASS	AC=28;AF=0.538;AN=52;BaseQRankSum=8.894;DP=538;FS=1.013;HRun=0;HaplotypeScore=105.1545;InbreedingCoeff=0.8686;MQ=63.56;MQ0=5;MQRankSum=-2.276;QD=10.43;ReadPosRankSum=-0.347;VQSLOD=2.7837;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:42.24:0,42,1051	./.	0/0:12,0:9:24.08:0,24,389	0/0:23,0:17:41.46:0,41,762	0/0:13,0:13:18:0,18,509	0/0:13,0:13:30.06:0,30,536	0/0:31,0:31:69.48:0,69,1474	1/1:3,13:16:35.70:539,36,0	1/1:2,13:14:15.05:283,15,0	1/1:3,13:16:29.88:436,30,0	./.	0/0:28,0:28:62.23:0,62,1485	1/1:0,11:11:3.01:47,3,0	1/1:5,16:20:6.76:83,7,0	0/0:18,0:18:44.59:0,45,731	0/0:15,0:15:42.14:0,42,878	1/1:5,41:46:30.91:411,31,0	0/0:29,0:29:75.20:0,75,1544	1/1:5,9:13:27.60:218,28,0	1/1:15,0:16:14.91:131,15,0	1/1:27,0:33:7.17:92,7,0	0/0:16,0:16:36.07:0,36,621	1/1:1,6:7:2.36:10,2,0	1/1:4,25:29:3.37:9,3,0	0/0:22,0:22:62.52:0,63,1110	1/1:0,14:13:33.11:569,33,0	1/1:5,17:22:8.85:123,9,0	1/1:1,9:10:5.95:70,6,0
chr10	15674905	.	G	GCA	621.57	PASS	AB=1.000;AC=9;AF=0.167;AN=54;BaseQRankSum=5.708;DP=500;FS=2.157;HRun=0;HaplotypeScore=96.0593;InbreedingCoeff=0.4761;MQ=77.21;MQ0=3;MQRankSum=-2.904;QD=4.89;ReadPosRankSum=-1.096;VQSLOD=2.2106;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:57.18:0,57,845	0/0:10,0:10:5.98:0,6,47	0/0:18,0:15:38.75:0,39,436	0/0:30,0:24:37.69:0,38,595	0/0:14,0:14:42.01:0,42,532	0/0:12,0:12:24.08:0,24,362	0/0:28,0:28:75.22:0,75,1114	0/0:18,0:18:4.93:0,5,160	0/0:18,0:18:31.56:0,32,188	0/1:12,0:12:12.88:13,0,92	./.	0/0:25,0:25:69.23:0,69,1050	0/0:12,0:12:9.92:0,10,53	0/0:16,0:15:5.72:0,6,33	0/0:13,0:13:39.08:0,39,539	0/0:15,0:15:42.14:0,42,638	0/1:38,0:38:14.97:15,0,34	0/0:26,0:26:69.21:0,69,1023	1/1:10,1:11:31.52:297,32,0	1/1:18,1:19:23.06:244,23,0	1/1:29,4:33:20.82:194,21,0	0/0:11,0:11:33.08:0,33,476	0/0:7,0:7:5.87:0,6,40	0/0:26,0:26:8.96:0,9,69	0/0:19,0:19:48.16:0,48,727	0/1:14,0:13:10.53:11,0,101	0/0:17,0:17:3.32:0,3,62	0/0:11,0:11:7.75:0,8,45
chr10	15675675	.	A	ATG	7140.22	PASS	AB=0.659;AC=25;AF=0.446;AN=56;BaseQRankSum=-12.585;DP=824;FS=0.000;HRun=0;HaplotypeScore=160.3263;InbreedingCoeff=0.1658;MQ=66.65;MQ0=2;MQRankSum=2.827;QD=14.75;ReadPosRankSum=-2.650;VQSLOD=4.2896;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:38:42.61:0,43,210	0/1:8,8:16:19.28:151,0,19	1/1:27,0:14:2.04:6,2,0	0/0:32,0:24:2.21:0,2,72	0/1:10,21:32:24.19:559,0,24	0/1:8,15:23:41.90:274,0,42	1/1:10,16:25:18.06:279,18,0	1/1:26,5:31:20.52:286,21,0	0/1:11,14:25:73.40:295,0,73	1/1:11,19:31:24.73:849,25,0	0/1:8,11:19:97.95:249,0,98	0/0:14,0:41:30.94:0,31,153	0/1:10,9:20:7.40:345,0,7	0/1:9,15:24:0.39:385,0,0	0/0:12,0:45:45.41:0,45,223	0/0:13,0:40:53.97:0,54,265	1/1:20,14:34:9.27:994,9,0	0/0:11,0:16:17.65:0,18,91	0/1:18,0:18:15.21:16,0,15	0/0:19,0:29:21.37:0,21,103	0/0:29,0:33:2.20:0,2,21	0/0:8,0:29:34.05:0,34,168	0/1:9,13:23:64.45:122,0,64	1/1:26,18:45:49.27:1143,49,0	0/0:11,0:36:25.49:0,25,126	1/1:23,19:45:12.43:681,12,0	0/1:6,8:15:50.70:168,0,51	0/1:7,21:28:39.62:338,0,40
chr10	15675796	.	T	TGA	2137.52	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-0.751;DP=931;FS=1.039;HRun=0;HaplotypeScore=162.6857;InbreedingCoeff=0.9610;MQ=58.16;MQ0=9;MQRankSum=-1.702;QD=23.49;ReadPosRankSum=-0.090;VQSLOD=4.2808;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,111,1304	0/0:14,0:14:39.12:0,39,491	0/0:44,0:18:5.90:0,6,270	0/0:51,0:30:38.88:0,39,402	0/0:23,0:23:62.96:0,63,740	0/0:29,0:29:66.19:0,66,807	0/0:31,0:31:75.16:0,75,867	0/0:29,0:28:72.15:0,72,802	0/0:43,0:43:99:0,105,1233	0/0:28,0:28:72.19:0,72,844	0/0:13,0:13:33.09:0,33,393	0/0:51,0:51:99:0,126,1469	0/0:35,0:35:78.21:0,78,938	0/0:38,0:38:87.17:0,87,1012	0/0:72,0:72:99:0,168,1865	0/0:44,0:44:99:0,120,1398	0/0:27,0:27:66.18:0,66,794	0/0:20,0:20:42.09:0,42,499	1/1:16,4:20:21.08:423,21,0	1/1:12,13:25:44.94:849,45,0	1/1:35,11:45:71.99:1008,72,0	0/0:35,0:35:90.08:0,90,1067	0/0:22,0:22:57.14:0,57,669	0/0:48,0:48:99:0,105,1236	0/0:24,0:24:66.01:0,66,767	0/0:33,0:33:90.25:0,90,1077	0/0:34,0:33:78.19:0,78,917	0/0:12,0:12:27.07:0,27,325
chr10	15675842	.	AGT	A	3184.44	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=1.904;DP=1023;FS=15.273;HRun=0;HaplotypeScore=212.2853;InbreedingCoeff=0.9994;MQ=62.97;MQ0=3;MQRankSum=-1.357;QD=26.99;ReadPosRankSum=-2.123;VQSLOD=2.6500;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,126,2086	0/0:15,0:15:30.09:0,30,483	0/0:37,0:28:48.59:0,49,943	0/0:39,0:30:57.93:0,58,860	0/0:35,0:35:90.29:0,90,1510	0/0:35,0:35:96.30:0,96,1607	0/0:24,0:23:57.16:0,57,917	0/0:46,0:46:99:0,120,2003	0/0:42,0:42:99:0,102,1715	0/0:51,0:51:99:0,141,2411	0/0:9,0:9:27.08:0,27,431	0/0:57,0:57:99:0,165,2708	0/0:25,0:25:69.22:0,69,1146	0/0:38,0:38:99:0,108,1775	0/0:71,0:71:99:0,193,3246	0/0:57,0:57:99:0,166,2788	0/0:24,0:24:56.86:0,57,914	0/0:22,0:22:60.17:0,60,956	1/1:4,18:22:51.11:616,51,0	1/1:6,22:28:60.19:783,60,0	1/1:18,50:67:99:1928,150,0	0/0:37,0:37:99:0,102,1741	0/0:24,0:24:66.19:0,66,1069	0/0:47,0:47:99:0,117,1981	0/0:26,0:26:66.21:0,66,1104	0/0:37,0:37:99:0,102,1693	0/0:27,0:25:78.25:0,78,1265	0/0:30,0:29:84.22:0,84,1366
chr10	15675886	.	TGA	T	14536.69	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=17.756;DP=1167;FS=0.000;HRun=0;HaplotypeScore=203.7255;InbreedingCoeff=0.9958;MQ=58.68;MQ0=9;MQRankSum=1.564;QD=33.34;ReadPosRankSum=0.950;VQSLOD=5.4163;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,2:49:79.24:0,79,2095	1/1:1,10:11:30.06:390,30,0	0/0:55,0:26:46.44:0,46,747	0/0:65,1:36:73.40:0,73,892	0/0:30,0:30:81.26:0,81,1399	0/0:33,0:33:84.14:0,84,1458	0/0:34,0:34:93.23:0,93,1523	1/1:3,34:36:99:1193,102,0	1/1:14,31:45:99:1511,120,0	1/1:25,37:63:99:2048,162,0	1/1:5,11:16:39.10:501,39,0	0/0:68,0:68:99:0,195,3160	1/1:10,23:33:96.17:1193,96,0	1/1:18,20:38:93.20:1142,93,0	0/0:80,0:80:99:0,190,3385	0/0:63,0:63:99:0,177,2896	1/1:7,15:22:53.17:702,53,0	0/0:30,0:30:63.48:0,63,1273	0/0:26,0:24:63.12:0,63,945	0/0:26,0:26:60.65:0,61,989	0/0:108,0:106:99:0,255,4061	0/0:35,0:35:96.29:0,96,1605	1/1:9,21:30:78.20:1002,78,0	1/1:20,31:51:99:1621,132,0	0/0:28,0:28:65.37:0,65,1174	1/1:11,24:35:99:1334,102,0	1/1:5,18:22:12.17:737,12,0	1/1:9,23:32:93.17:1164,93,0
chr10	15675947	.	TTG	T	14277.37	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=15.907;DP=1210;FS=9.949;HRun=0;HaplotypeScore=230.2904;InbreedingCoeff=0.9994;MQ=60.06;MQ0=5;MQRankSum=1.396;QD=30.06;ReadPosRankSum=2.285;VQSLOD=4.7183;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,126,2008	1/1:5,5:10:27.04:306,27,0	0/0:41,0:23:54.16:0,54,814	0/0:45,0:34:65.27:0,65,933	0/0:24,0:24:51.17:0,51,858	0/0:27,0:26:57.15:0,57,917	0/0:43,0:43:99:0,111,1814	1/1:15,41:56:99:1441,123,0	1/1:9,46:55:99:1891,150,0	1/1:6,45:51:99:1659,132,0	1/1:5,22:27:51.12:641,51,0	0/0:69,0:69:99:0,181,2964	1/1:8,31:39:99:1223,99,0	1/1:10,38:48:99:1399,114,0	0/0:89,0:89:99:0,222,3742	0/0:63,0:63:99:0,178,2953	1/1:5,30:35:74.31:1174,74,0	0/0:38,0:38:99:0,99,1572	0/0:32,0:31:69.20:0,69,1131	0/0:28,0:28:66.21:0,66,1087	0/0:128,0:125:99:0,289,4700	0/0:37,0:37:99:0,99,1625	1/1:8,18:26:59.76:658,60,0	1/1:13,40:53:99:1424,117,0	0/0:20,1:21:21.60:0,22,903	1/1:5,24:29:75.22:938,75,0	1/1:3,19:22:60.18:758,60,0	1/1:6,18:24:60.19:766,60,0
chr10	15675985	.	CTG	C	4812.34	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=1.750;DP=1253;FS=23.452;HRun=0;HaplotypeScore=308.3338;InbreedingCoeff=0.9943;MQ=58.46;MQ0=5;MQRankSum=-1.618;QD=26.01;ReadPosRankSum=-2.200;VQSLOD=3.8384;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,120,1940	0/0:6,0:6:15.05:0,15,255	0/0:49,0:37:42.02:0,42,894	0/0:49,0:31:38.01:0,38,772	0/0:34,0:34:87.13:0,87,1392	0/0:30,0:29:45.20:0,45,934	0/0:39,0:39:99:0,102,1669	0/0:46,0:46:99:0,116,1776	0/0:52,0:52:93.56:0,94,1642	0/0:58,0:58:99:0,160,2622	0/0:25,0:25:60.21:0,60,1016	0/0:63,0:63:99:0,163,2682	0/0:40,0:40:99:0,105,1720	0/0:50,0:50:99:0,106,1804	0/0:80,0:80:99:0,184,3560	0/0:74,0:74:99:0,199,3184	0/0:40,0:40:99:0,100,1790	0/0:42,0:42:99:0,108,1768	1/1:23,15:36:84.19:983,84,0	1/1:9,22:31:55.92:793,56,0	1/1:43,72:113:99:3036,243,0	0/0:36,0:36:87.27:0,87,1416	0/0:23,0:23:42.14:0,42,710	0/0:57,0:57:99:0,122,2035	0/0:33,1:34:84.29:0,84,1412	0/0:43,0:43:99:0,123,1985	0/0:30,0:30:81.28:0,81,1369	0/0:20,0:20:36.12:0,36,611
chr10	15676026	.	A	AGT	11994.95	PASS	AB=1.000;AC=33;AF=0.589;AN=56;BaseQRankSum=13.788;DP=1043;FS=4.785;HRun=0;HaplotypeScore=233.8179;InbreedingCoeff=0.9065;MQ=60.72;MQ0=4;MQRankSum=0.890;QD=24.89;ReadPosRankSum=-0.365;VQSLOD=4.9158;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,1:47:99:0,104,1369	1/1:3,1:4:12.01:146,12,0	0/0:45,0:36:30.96:0,31,531	0/1:43,0:30:11.78:12,0,286	0/0:36,0:36:64.85:0,65,938	0/0:20,0:21:26.64:0,27,579	0/0:42,0:42:99:0,111,1344	1/1:29,0:29:50.72:596,51,0	1/1:8,13:21:35.32:528,35,0	1/1:16,12:28:60.10:820,60,0	1/1:6,6:12:18.03:277,18,0	0/0:85,0:85:99:0,219,2699	1/1:7,12:19:45.09:701,45,0	1/1:13,12:25:35.53:501,36,0	0/0:94,0:94:99:0,245,3009	0/0:73,0:73:99:0,199,2476	1/1:14,9:22:8.60:615,9,0	0/0:44,2:47:10.28:0,10,1341	1/1:18,11:25:63.13:925,63,0	1/1:12,22:31:63.10:911,63,0	1/1:60,50:112:99:3216,197,0	0/0:40,0:40:99:0,111,1386	1/1:7,6:13:18.03:248,18,0	1/1:17,21:38:26.75:849,27,0	0/0:30,0:30:78.24:0,78,1001	1/1:9,12:21:57.03:814,57,0	1/1:11,6:17:42.01:584,42,0	1/1:5,5:10:15.05:254,15,0
chr10	15676078	.	T	TGC	1683.48	PASS	AB=0.804;AC=22;AF=0.407;AN=54;BaseQRankSum=8.212;DP=967;FS=20.632;HRun=0;HaplotypeScore=217.1466;InbreedingCoeff=0.7025;MQ=57.81;MQ0=2;MQRankSum=-2.393;QD=15.73;ReadPosRankSum=-6.751;VQSLOD=0.8672;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,128,1810	./.	0/0:45,0:34:91.04:0,91,1172	0/0:60,0:42:77.89:0,78,1301	0/0:37,0:37:99:0,105,1502	0/0:18,0:18:48.83:0,49,671	0/0:50,0:50:99:0,129,1883	0/1:8,0:8:28.22:28,0,42	1/1:0,10:10:6.02:94,6,0	1/1:1,5:7:18.02:291,18,0	1/1:0,4:4:3.01:58,3,0	0/0:88,0:88:99:0,255,3725	1/1:4,6:10:8.74:163,9,0	1/1:2,8:10:6.02:115,6,0	0/0:91,0:91:99:0,260,3792	0/0:68,0:68:99:0,193,2784	0/1:5,9:13:14.35:260,0,14	0/0:35,1:36:46.10:0,46,1338	0/0:34,2:34:58.89:0,59,1230	0/0:36,0:33:81.26:0,81,1214	0/0:153,7:159:99:0,381,5341	0/0:52,0:52:99:0,153,2225	1/1:0,4:4:3.01:57,3,0	1/1:7,11:18:11.72:229,12,0	0/0:30,0:30:81.22:0,81,1159	1/1:0,8:9:24.08:413,24,0	1/1:3,3:7:3.01:56,3,0	1/1:0,6:6:6.02:110,6,0
chr10	15676112	.	TGA	T	5540.85	PASS	AB=0.688;AC=5;AF=0.089;AN=56;BaseQRankSum=5.833;DP=1085;FS=4.904;HRun=0;HaplotypeScore=232.1722;InbreedingCoeff=0.7798;MQ=60.36;MQ0=4;MQRankSum=-1.437;QD=25.65;ReadPosRankSum=3.538;VQSLOD=5.2019;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,132,2134	0/0:10,0:10:21.06:0,21,332	0/0:36,0:29:51.06:0,51,711	0/0:52,0:40:65.74:0,66,879	0/0:28,0:28:78.21:0,78,1242	0/0:22,0:22:53.60:0,54,766	0/0:50,0:50:99:0,132,2034	0/0:35,0:35:99:0,99,1631	0/0:33,0:33:75.18:0,75,1142	0/0:28,0:28:84.10:0,84,1185	0/0:15,0:15:30.07:0,30,459	0/0:80,0:80:99:0,194,3157	0/0:21,0:21:48.09:0,48,701	0/0:32,0:32:75.17:0,75,1131	0/0:84,0:84:99:0,226,3503	0/0:61,0:61:99:0,175,2847	0/0:24,0:25:59.95:0,60,907	0/0:33,0:34:73.96:0,74,1329	0/1:18,15:31:20.23:800,0,20	1/1:9,21:27:66.62:817,67,0	1/1:54,99:151:99:3923,312,0	0/0:42,0:42:99:0,114,1916	0/0:12,0:12:24.04:0,24,360	0/0:36,0:36:71.59:0,72,1088	0/0:24,0:24:66.19:0,66,1112	0/0:25,0:25:75.23:0,75,1186	0/0:22,0:22:60.07:0,60,894	0/0:12,0:12:24.03:0,24,326
chr10	15676213	.	G	GTGCGTC	3146.32	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=3.362;DP=1088;FS=0.564;HRun=0;HaplotypeScore=255.6059;InbreedingCoeff=0.9967;MQ=63.47;MQ0=2;MQRankSum=-6.238;QD=28.09;ReadPosRankSum=-3.651;VQSLOD=2.6626;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,117,2583	0/0:12,0:12:36.11:0,36,751	0/0:44,0:27:80.42:0,80,1306	0/0:51,0:36:95.94:0,96,1896	0/0:24,0:24:72.23:0,72,1674	0/0:23,0:22:60.14:0,60,1235	0/0:43,0:43:99:0,123,2591	0/0:47,0:47:99:0,123,2350	0/0:52,0:52:99:0,132,2827	0/0:57,0:57:99:0,150,3321	0/0:13,0:13:39.09:0,39,793	0/0:61,0:61:99:0,177,3947	0/0:41,0:41:99:0,120,2502	0/0:45,0:45:99:0,117,2534	0/0:71,0:71:99:0,205,4550	0/0:49,0:49:99:0,141,3067	0/0:41,0:41:99:0,111,2479	0/0:40,0:40:99:0,114,2362	1/1:4,25:30:81.22:2128,81,0	1/1:1,25:35:17.60:553,18,0	1/1:35,10:44:34.36:606,34,0	0/0:34,0:34:96.28:0,96,2106	0/0:29,0:29:80.28:0,80,1729	0/0:50,0:50:99:0,117,2554	0/0:21,0:21:62.41:0,62,1332	0/0:40,0:40:99:0,117,2483	0/0:30,0:29:72.50:0,72,1562	0/0:14,0:14:41.96:0,42,797
chr10	15676408	.	T	TA	7691.66	PASS	AB=1.000;AC=32;AF=0.571;AN=56;BaseQRankSum=13.038;DP=653;FS=11.186;HRun=1;HaplotypeScore=104.6792;InbreedingCoeff=0.8795;MQ=72.66;MQ0=0;MQRankSum=-0.781;QD=21.25;ReadPosRankSum=1.019;VQSLOD=3.8420;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,123,1698	1/1:1,11:12:28.29:334,28,0	0/0:12,0:12:12.78:0,13,372	0/1:16,0:16:3.65:4,0,288	0/0:27,0:27:81.27:0,81,1128	0/0:22,0:21:66.22:0,66,914	0/0:27,0:27:81.27:0,81,1131	1/1:3,23:26:61.69:699,62,0	1/1:3,17:20:36.06:407,36,0	1/1:2,20:22:54.77:606,55,0	1/1:3,28:31:81.04:883,81,0	0/0:22,0:22:66.22:0,66,923	0/1:17,0:17:7.21:25,0,7	1/1:1,20:21:60.12:660,60,0	0/0:31,0:31:93.31:0,93,1295	0/0:34,1:35:70.73:0,71,1302	1/1:4,21:25:62.04:695,62,0	0/0:20,0:20:60.16:0,60,814	1/1:4,2:18:34.02:219,34,0	1/1:0,3:17:30.01:160,30,0	1/1:0,3:18:38.72:235,39,0	0/0:30,0:30:90.29:0,90,1242	1/1:10,17:27:43:602,43,0	1/1:3,23:26:53.40:633,53,0	0/0:22,0:22:63.21:0,63,878	1/1:6,22:28:49.33:699,49,0	1/1:4,23:27:34.12:565,34,0	1/1:2,9:11:11.52:267,12,0
chr10	15676409	.	T	TA	8280.93	PASS	AB=0.779;AC=32;AF=0.571;AN=56;BaseQRankSum=11.799;DP=659;FS=3.581;HRun=8;HaplotypeScore=105.2950;InbreedingCoeff=0.8956;MQ=71.82;MQ0=0;MQRankSum=-1.284;QD=22.69;ReadPosRankSum=-1.682;VQSLOD=3.9208;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,114,1029	1/1:12,0:12:30.09:346,30,0	0/1:12,0:12:1.12:1,0,200	0/0:14,0:15:16.55:0,17,228	0/0:27,0:27:69.03:0,69,631	0/0:22,0:21:60.03:0,60,549	0/0:27,0:27:69.03:0,69,631	1/1:26,0:26:63.19:727,63,0	1/1:20,0:20:42.10:466,42,0	1/1:22,0:22:60.12:660,60,0	1/1:31,0:31:81.15:905,81,0	0/0:22,0:22:63.03:0,63,577	0/1:4,15:19:7.29:29,0,7	1/1:22,0:22:63.13:711,63,0	0/0:31,0:31:87.03:0,87,792	0/0:35,0:35:58.43:0,58,776	1/1:27,0:27:47.88:709,48,0	0/0:20,0:20:47.96:0,48,430	1/1:18,0:18:40.15:250,40,0	1/1:17,0:17:32.88:202,33,0	1/1:18,0:18:40.47:268,40,0	0/0:30,0:30:78.01:0,78,708	1/1:28,0:28:44.81:644,45,0	1/1:25,0:25:57.17:658,57,0	0/0:21,0:22:59.06:0,59,528	1/1:28,0:28:57.99:744,58,0	1/1:27,0:27:54.16:623,54,0	1/1:13,0:13:22.07:337,22,0
chr10	15676952	.	TC	T	10254.27	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=14.545;DP=652;FS=3.903;HRun=2;HaplotypeScore=80.2073;InbreedingCoeff=0.9994;MQ=87.28;MQ0=1;MQRankSum=-3.803;QD=34.07;ReadPosRankSum=0.465;VQSLOD=5.1159;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,150,2208	1/1:0,7:7:21.07:272,21,0	0/0:22,0:22:66.19:0,66,945	0/0:22,0:22:44.90:0,45,732	0/0:16,0:16:48.16:0,48,707	0/0:21,0:21:63.20:0,63,926	0/0:24,0:24:72.24:0,72,1056	1/1:2,36:38:99:1317,105,0	1/1:1,22:23:63.20:818,63,0	1/1:1,28:28:78.25:1012,78,0	1/1:0,19:19:51.12:643,51,0	0/0:30,0:30:90.28:0,90,1306	1/1:0,31:31:87.28:1129,87,0	1/1:0,28:28:72.23:935,72,0	0/0:23,0:23:69.23:0,69,1029	0/0:34,0:34:99:0,102,1509	1/1:1,20:21:48.16:623,48,0	0/0:16,0:16:42.14:0,42,621	0/0:24,0:24:72.23:0,72,1034	0/0:12,0:12:36.12:0,36,539	0/0:20,0:20:57.19:0,57,854	0/0:18,0:18:54.17:0,54,789	1/1:0,19:19:45.14:585,45,0	1/1:0,21:21:54.18:701,54,0	0/0:17,0:17:51.17:0,51,763	1/1:1,21:22:63.20:818,63,0	1/1:0,29:29:72.23:935,72,0	1/1:0,14:14:36.12:467,36,0
chr10	15677302	.	CA	C	8441.55	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=12.770;DP=566;FS=2.293;HRun=2;HaplotypeScore=56.8596;InbreedingCoeff=0.9897;MQ=82.44;MQ0=0;MQRankSum=-3.222;QD=34.46;ReadPosRankSum=0.829;VQSLOD=4.9802;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,120,1776	1/1:0,6:6:18.06:234,18,0	0/0:17,0:17:48.16:0,48,699	0/0:14,0:14:36.06:0,36,469	0/0:6,0:6:18.06:0,18,267	0/0:27,0:27:81.25:0,81,1168	0/0:28,0:28:81.26:0,81,1193	1/1:1,31:32:90.26:1126,90,0	1/1:1,21:22:63.20:818,63,0	1/1:1,9:10:27.07:336,27,0	1/1:0,9:9:27.09:350,27,0	0/0:30,0:30:84.26:0,84,1216	1/1:0,21:21:51.17:662,51,0	1/1:1,21:22:12.96:657,13,0	0/0:19,0:19:57.18:0,57,832	0/0:17,0:17:51.16:0,51,744	1/1:0,41:41:99:1479,114,0	0/0:26,0:26:75.19:0,75,1074	0/0:14,0:14:42.13:0,42,604	0/0:12,0:12:36.11:0,36,519	0/0:46,0:46:99:0,135,1977	0/0:10,0:10:30.09:0,30,417	1/1:0,5:5:12.04:155,12,0	1/1:0,32:32:72.23:932,72,0	0/0:14,0:14:42.13:0,42,598	1/1:0,19:19:57.14:719,57,0	1/1:0,15:15:42.14:545,42,0	1/1:0,11:11:33.11:428,33,0
chr10	15677566	.	A	AT	154.97	PASS	AB=0.868;AC=6;AF=0.111;AN=54;BaseQRankSum=3.381;DP=181;FS=3.710;HRun=0;HaplotypeScore=37.4220;InbreedingCoeff=-0.1631;MQ=86.95;MQ0=3;MQRankSum=-3.821;QD=2.63;ReadPosRankSum=-0.596;VQSLOD=2.0661;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:30.06:0,30,353	0/0:2,0:2:6.02:0,6,80	0/0:11,0:10:27.08:0,27,358	0/0:5,0:4:11.25:0,11,133	0/0:4,0:4:12.03:0,12,148	0/0:5,0:5:11.75:0,12,96	0/0:5,0:5:15.03:0,15,190	0/1:21,2:23:43.05:43,0,758	0/0:2,0:2:6.02:0,6,79	0/0:4,0:4:12.04:0,12,163	0/0:5,0:5:15.04:0,15,192	0/0:7,0:7:18.04:0,18,222	0/1:5,0:5:35.61:36,0,68	0/1:4,1:5:30.07:30,0,148	0/0:7,0:7:21.05:0,21,248	0/0:1,0:1:3.01:0,3,42	0/0:15,0:15:28.98:0,29,489	0/0:11,0:11:25.87:0,26,297	0/0:7,0:7:21.07:0,21,284	0/0:5,0:5:15.05:0,15,206	0/0:2,0:2:6.02:0,6,84	0/0:4,0:4:12.04:0,12,168	0/0:2,0:2:5.95:0,6,60	./.	0/0:8,0:8:21.02:0,21,226	0/1:8,1:9:23.63:24,0,263	0/1:8,2:10:63.07:63,0,257	0/1:3,2:5:36.82:81,0,37
chr10	15677568	.	T	TTAATAATAATAA	2499.91	PASS	AB=0.816;AC=20;AF=0.667;AN=30;BaseQRankSum=-2.734;DP=166;FS=3.413;HRun=0;HaplotypeScore=67.8660;InbreedingCoeff=0.5335;MQ=84.96;MQ0=3;MQRankSum=-4.289;QD=25.77;ReadPosRankSum=-2.475;VQSLOD=1.8343;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:9:11.96:0,12,94	./.	./.	./.	./.	1/1:1,1:5:6.02:313,6,0	./.	1/1:24,0:22:15.05:364,15,0	1/1:3,0:3:3.01:124,3,0	./.	./.	0/0:4,0:7:5.98:0,6,45	1/1:0,0:3:6.02:235,6,0	1/1:5,0:5:3.01:154,3,0	0/0:3,0:6:8.98:0,9,71	./.	1/1:14,0:15:17.97:318,18,0	0/1:5,0:12:7.16:7,0,50	0/1:7,0:7:0:0,0,0	./.	./.	./.	./.	./.	0/0:2,0:5:5.99:0,6,47	1/1:8,0:8:3.01:122,3,0	1/1:10,0:10:15.05:326,15,0	1/1:3,0:5:15.05:656,15,0
chr10	15677696	.	GAAA	G	763.93	PASS	AB=1.000;AC=9;AF=0.173;AN=52;BaseQRankSum=-3.956;DP=282;FS=6.904;HRun=9;HaplotypeScore=52.1705;InbreedingCoeff=0.4802;MQ=59.70;MQ0=7;MQRankSum=1.371;QD=12.32;ReadPosRankSum=1.322;VQSLOD=-0.2612;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:19:57.18:0,57,1137	0/0:3,0:3:9.03:0,9,132	0/0:8,0:3:6.90:0,7,79	0/0:9,0:6:13.85:0,14,219	1/1:0,11:11:24.08:333,24,0	1/1:1,6:7:18.06:255,18,0	1/1:1,8:8:18.06:255,18,0	0/0:33,0:32:24.37:0,24,778	0/0:2,0:2:3:0,3,28	0/0:5,0:5:14.98:0,15,157	0/0:3,0:3:9.03:0,9,113	0/0:6,0:5:15.05:0,15,319	0/0:5,0:4:6.02:0,6,84	./.	0/0:6,0:6:15.05:0,15,300	0/0:7,0:8:21.07:0,21,385	0/0:28,0:27:54.38:0,54,714	0/0:17,0:17:45.11:0,45,894	0/1:14,0:14:51.20:51,0,222	0/1:8,0:7:5.88:6,0,171	0/0:12,0:11:5.29:0,5,194	./.	0/0:2,0:2:5.99:0,6,59	0/1:13,0:13:10.80:11,0,319	0/0:7,0:7:21.06:0,21,374	0/0:10,0:10:30.09:0,30,360	0/0:11,0:11:30.10:0,30,412	0/0:18,0:17:42.14:0,42,554
chr10	15677854	.	C	CTTTT	3057.48	PASS	AB=1.000;AC=27;AF=0.482;AN=56;BaseQRankSum=1.802;DP=388;FS=1.840;HRun=12;HaplotypeScore=72.8782;InbreedingCoeff=0.7894;MQ=73.45;MQ0=1;MQRankSum=-4.225;QD=18.99;ReadPosRankSum=-3.773;VQSLOD=0.9598;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:28:63.45:0,63,727	1/1:1,1:2:3.01:68,3,0	0/0:20,0:16:16.59:0,17,128	0/0:18,0:11:7.40:0,7,103	0/0:10,0:10:14.60:0,15,181	0/0:16,0:17:41.97:0,42,518	0/0:15,0:15:39.07:0,39,511	1/1:17,16:33:42.46:724,42,0	1/1:1,3:4:3.01:68,3,0	1/1:5,7:13:21.05:378,21,0	1/1:3,6:8:6.02:136,6,0	0/0:14,0:14:39.02:0,39,482	1/1:4,4:7:6.02:136,6,0	1/1:5,0:5:5.97:47,6,0	0/0:7,0:9:17.54:0,18,204	0/0:18,0:18:45.52:0,46,548	1/1:7,11:22:26.84:406,27,0	0/0:21,0:21:44.87:0,45,538	0/0:7,0:24:19.58:0,20,83	0/0:4,0:15:7.53:0,8,20	1/1:1,0:5:4:31,4,0	0/0:2,0:2:6.02:0,6,79	1/1:2,0:2:3.01:67,3,0	0/1:2,0:2:0:0,0,0	0/0:15,0:15:23.84:0,24,315	1/1:6,12:18:12.01:573,12,0	1/1:5,11:18:18.06:346,18,0	1/1:10,5:17:15.05:279,15,0
chr10	15679793	.	TG	T	1355.02	PASS	AB=0.906;AC=23;AF=0.411;AN=56;BaseQRankSum=-9.538;DP=294;FS=0.663;HRun=11;HaplotypeScore=60.2874;InbreedingCoeff=0.6769;MQ=77.62;MQ0=0;MQRankSum=1.761;QD=8.74;ReadPosRankSum=1.594;VQSLOD=2.2683;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,5:13:20.97:172,21,0	0/0:2,0:2:5.86:0,6,35	0/1:11,0:10:15.49:15,0,49	0/0:4,0:4:0:0,0,0	0/1:6,2:8:23:40,0,23	0/0:14,0:14:15.91:0,16,154	0/1:10,1:11:6.59:7,0,142	0/0:12,0:12:28.51:0,29,144	0/0:10,0:10:29.47:0,29,193	0/0:11,0:11:25.37:0,25,122	0/0:3,0:3:8.86:0,9,65	1/1:7,4:13:22.03:158,22,0	0/0:10,0:10:26.42:0,26,158	0/0:14,0:14:41.25:0,41,275	1/1:12,3:15:26.91:212,27,0	1/1:4,5:9:20.97:171,21,0	0/0:21,0:21:61.57:0,62,368	1/1:10,14:26:60.02:460,60,0	1/1:2,0:5:8.15:23,8,0	1/1:2,0:6:6.10:17,6,0	1/1:12,0:24:30.04:85,30,0	1/1:3,3:6:8.58:73,9,0	0/0:4,0:4:8.77:0,9,51	0/0:11,0:11:32.38:0,32,199	1/1:6,2:8:14.98:123,15,0	0/0:14,0:14:37.34:0,37,200	0/0:8,0:8:23.57:0,24,148	0/0:1,0:1:2.94:0,3,18
chr10	15680773	.	T	TA	7131.83	PASS	AB=0.947;AC=27;AF=0.482;AN=56;BaseQRankSum=-12.944;DP=656;FS=1.012;HRun=9;HaplotypeScore=73.5135;InbreedingCoeff=0.9264;MQ=71.42;MQ0=0;MQRankSum=-1.576;QD=23.77;ReadPosRankSum=0.119;VQSLOD=5.5177;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:80.98:0,81,703	1/1:1,10:11:30.08:332,30,0	0/0:24,0:18:19.53:0,20,273	0/1:17,1:15:13.71:14,0,85	0/0:33,0:33:92.97:0,93,807	0/0:20,0:20:50.98:0,51,441	0/0:23,0:23:68.99:0,69,599	1/1:12,20:32:63.58:674,64,0	1/1:4,29:34:37.97:858,38,0	1/1:2,17:19:48.09:518,48,0	1/1:1,17:18:39.11:431,39,0	0/0:26,1:27:35.80:0,36,540	1/1:1,14:16:38.94:413,39,0	1/1:5,22:27:50.99:564,51,0	0/0:37,0:37:88.90:0,89,773	0/0:25,0:25:65.96:0,66,569	1/1:3,21:24:57.15:630,57,0	0/0:24,0:24:62.98:0,63,547	0/0:18,0:18:35.85:0,36,312	0/0:32,0:33:73.97:0,74,631	0/0:15,0:15:38.98:0,39,335	0/0:22,0:22:53.95:0,54,463	1/1:2,14:17:12.88:351,13,0	1/1:1,18:19:51.14:564,51,0	0/0:25,0:25:68.96:0,69,594	1/1:3,26:29:78.20:854,78,0	1/1:2,26:28:63.17:697,63,0	1/1:1,7:8:21.06:232,21,0
chr10	15680912	.	C	CT	12196.38	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-4.091;DP=637;FS=1.365;HRun=0;HaplotypeScore=72.7868;InbreedingCoeff=0.9992;MQ=81.36;MQ0=0;MQRankSum=-4.637;QD=42.50;ReadPosRankSum=2.001;VQSLOD=5.5950;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,117,1594	1/1:0,7:7:21.07:335,21,0	0/0:17,0:16:46.69:0,47,603	0/0:30,0:29:81.22:0,81,1091	0/0:32,0:32:96.32:0,96,1336	0/0:12,0:12:36.11:0,36,487	0/0:24,0:24:72.24:0,72,1006	1/1:1,21:22:66.21:1029,66,0	1/1:0,21:21:54.18:863,54,0	1/1:1,19:20:54.18:863,54,0	1/1:1,19:20:45.15:720,45,0	0/0:28,1:29:36.32:0,36,1070	1/1:0,23:23:60.20:959,60,0	1/1:0,17:17:51.17:815,51,0	0/0:24,0:24:72.23:0,72,990	0/0:15,0:15:42.14:0,42,587	1/1:0,38:38:93.32:1487,93,0	0/0:18,0:18:48.16:0,48,671	0/0:14,0:14:42.14:0,42,586	0/0:30,0:30:87.27:0,87,1195	0/0:37,0:37:99:0,111,1550	0/0:12,0:12:33.10:0,33,445	1/1:0,13:13:36.12:576,36,0	1/1:1,31:32:72.25:1150,72,0	0/0:16,0:16:48.16:0,48,671	1/1:2,35:37:99:1711,108,0	1/1:2,26:27:81.26:1257,81,0	1/1:0,9:9:27.09:432,27,0
chr10	15681013	.	A	ACCGT	22209.71	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-0.629;DP=719;FS=0.000;HRun=0;HaplotypeScore=126.2883;InbreedingCoeff=0.9988;MQ=75.65;MQ0=1;MQRankSum=-13.958;QD=70.96;ReadPosRankSum=0.922;VQSLOD=6.7898;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,120,2343	1/1:1,11:14:35.88:952,36,0	0/0:34,0:33:96.27:0,96,1834	0/0:24,0:22:63.68:0,64,1171	0/0:26,0:26:72.19:0,72,1297	0/0:24,0:24:72.23:0,72,1386	0/0:22,0:22:66.22:0,66,1284	1/1:9,22:32:90.31:2450,90,0	1/1:6,21:28:72.25:1944,72,0	1/1:4,14:19:51.18:1420,51,0	1/1:4,18:22:54.18:1443,54,0	0/0:27,0:27:78.27:0,78,1547	1/1:2,18:22:57.20:1586,57,0	1/1:3,32:38:96.33:2672,96,0	0/0:30,0:30:87.28:0,87,1692	0/0:24,0:24:63.22:0,63,1250	1/1:2,27:31:75.25:2094,75,0	0/0:34,0:34:93.27:0,93,1765	0/0:13,0:13:33.10:0,33,617	0/0:31,0:31:93.28:0,93,1745	0/0:32,0:32:93.31:0,93,1813	0/0:18,0:18:51.16:0,51,972	1/1:1,22:24:60.20:1652,60,0	1/1:8,20:28:75.21:1887,75,0	0/0:25,0:25:69.24:0,69,1378	1/1:4,20:25:72.25:1858,72,0	1/1:4,19:22:63.22:1750,63,0	1/1:0,6:6:18.06:502,18,0
chr10	15683059	.	A	ACTCTGCATAG	4637.55	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-2.429;DP=685;FS=0.000;HRun=0;HaplotypeScore=197.5387;InbreedingCoeff=0.9956;MQ=82.81;MQ0=1;MQRankSum=-9.018;QD=70.27;ReadPosRankSum=-0.773;VQSLOD=4.2086;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,114,3496	0/0:10,0:10:21.07:0,21,662	0/0:21,0:21:39.13:0,39,1182	0/0:24,0:24:43.96:0,44,1312	0/0:25,0:25:63.22:0,63,1936	0/0:19,0:19:54.19:0,54,1612	0/0:26,0:26:63.22:0,63,1898	0/0:35,0:35:81.28:0,81,2409	0/0:25,0:25:75.26:0,75,2286	0/0:32,0:32:78.27:0,78,2442	0/0:24,0:24:69.22:0,69,2013	0/0:30,0:30:81.26:0,81,2451	0/0:21,0:20:57.20:0,57,1779	0/0:29,0:29:78.23:0,78,2316	0/0:23,0:23:60.21:0,60,1783	0/0:32,0:32:84.29:0,84,2545	0/0:36,0:36:90.28:0,90,2664	0/0:23,0:23:60.21:0,60,1834	1/1:15,4:19:36.12:1681,36,0	1/1:8,12:21:42.14:2035,42,0	1/1:17,8:26:18.06:921,18,0	0/0:17,0:17:48.14:0,48,1431	0/0:18,0:18:51.18:0,51,1606	0/0:23,0:23:57.20:0,57,1795	0/0:17,0:17:48.15:0,48,1442	0/0:32,0:32:84.28:0,84,2487	0/0:20,0:19:57.18:0,57,1642	0/0:15,0:15:42.11:0,42,1171
chr10	15683291	.	C	CA	1649.07	PASS	AB=0.795;AC=16;AF=0.286;AN=56;BaseQRankSum=-3.104;DP=654;FS=4.047;HRun=12;HaplotypeScore=100.1722;InbreedingCoeff=0.4527;MQ=69.80;MQ0=2;MQRankSum=-0.161;QD=6.04;ReadPosRankSum=0.910;VQSLOD=2.5726;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:10,40:52:7.39:533,7,0	0/0:10,0:10:26.81:0,27,194	0/0:41,0:24:12.61:0,13,132	0/0:33,0:19:14.57:0,15,114	0/0:19,1:21:8.66:0,9,267	0/1:19,4:24:35.34:35,0,231	0/0:23,0:25:62.16:0,62,428	0/0:25,1:26:15.12:0,15,267	0/0:18,0:18:39.11:0,39,280	0/1:25,1:27:9.67:10,0,201	0/0:13,0:16:27.84:0,28,186	0/1:4,17:22:7.05:87,0,7	0/0:20,0:20:10.28:0,10,224	0/0:22,0:22:41.60:0,42,285	1/1:5,17:22:18.03:175,18,0	0/1:5,14:18:3.90:128,0,4	0/0:31,0:32:23.48:0,23,402	1/1:5,19:25:13.89:268,14,0	0/0:7,0:14:14.59:0,15,39	0/0:14,0:16:1.78:0,2,45	0/1:17,0:20:0.58:22,0,1	1/1:4,17:21:35.91:320,36,0	0/0:17,0:17:15.33:0,15,221	0/0:27,0:27:4.19:0,4,264	1/1:6,14:21:20.64:231,21,0	0/0:29,1:30:29.30:0,29,359	0/1:15,4:19:16.62:17,0,216	0/0:10,3:13:0.65:0,1,168
chr10	15685168	.	C	CGTGTATGTGTGTGTGTGTGTGTGTGT	29230.13	PASS	AB=0.686;AC=31;AF=0.554;AN=56;BaseQRankSum=7.093;DP=664;FS=5.280;HRun=0;HaplotypeScore=405.5921;InbreedingCoeff=0.8660;MQ=64.24;MQ0=1;MQRankSum=-12.607;QD=82.57;ReadPosRankSum=-1.579;VQSLOD=2.7858;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:93.21:0,93,4697	1/1:8,0:8:9.02:419,9,0	0/0:35,0:33:59.12:0,59,2507	0/0:35,0:29:57.72:0,58,1643	0/0:8,0:8:24.02:0,24,1200	0/0:20,0:20:60.21:0,60,3738	0/0:24,0:25:72.23:0,72,3859	1/1:20,0:15:30.03:679,30,0	1/1:16,0:27:24.08:2612,24,0	1/1:22,0:22:57.14:2728,57,0	1/1:18,0:18:5.21:90,5,0	0/0:29,0:29:81.23:0,81,4592	1/1:27,0:27:51.13:3322,51,0	1/1:22,0:22:27.02:1286,27,0	0/0:32,0:32:90.26:0,90,5193	0/0:31,0:31:90.30:0,90,4951	1/1:14,0:27:45.63:4586,46,0	0/0:28,0:28:72.22:0,72,4314	1/1:26,0:26:69.17:3176,69,0	1/1:13,0:11:2.64:24,3,0	0/1:26,1:45:0.11:0,0,0	0/0:17,0:17:48.16:0,48,3191	1/1:20,0:19:1.79:379,2,0	1/1:9,0:21:1.80:640,2,0	0/0:16,0:17:51.14:0,51,2973	1/1:25,0:25:72.11:4752,72,0	1/1:20,0:20:36.12:3336,36,0	1/1:4,0:9:15.05:1201,15,0
chr10	15690068	.	G	GC	497.71	PASS	AB=0.849;AC=13;AF=0.232;AN=56;BaseQRankSum=7.044;DP=407;FS=8.008;HRun=0;HaplotypeScore=53.5607;InbreedingCoeff=-0.3204;MQ=83.52;MQ0=0;MQRankSum=0.492;QD=3.95;ReadPosRankSum=-6.556;VQSLOD=-0.2972;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:90.30:0,90,1257	0/1:4,2:6:79.90:80,0,110	0/0:13,0:13:37.24:0,37,440	0/0:20,0:19:0.07:0,0,502	0/0:29,0:29:87.29:0,87,1211	0/0:25,0:25:72.21:0,72,970	0/0:13,0:13:36.12:0,36,503	0/0:19,1:20:9.49:0,9,690	0/1:7,2:9:68.43:68,0,248	0/1:11,1:12:14.81:15,0,385	0/1:6,1:7:26.53:27,0,152	0/0:24,0:24:69.21:0,69,947	0/0:11,0:11:6.11:0,6,352	0/1:9,3:12:56.04:56,0,283	0/0:14,0:14:42.14:0,42,587	0/0:26,0:26:72.23:0,72,991	0/1:7,2:9:35.73:36,0,114	0/0:20,0:20:60.20:0,60,839	0/1:8,2:10:68.22:68,0,266	0/1:7,0:7:6.92:7,0,191	0/1:2,1:3:35.87:42,0,36	0/0:15,0:15:45.15:0,45,628	0/1:10,2:12:68.59:69,0,265	0/1:5,5:10:32.71:76,0,33	0/0:12,0:12:33.10:0,33,444	0/1:18,1:19:63.55:64,0,551	0/0:9,0:9:27.09:0,27,376	0/1:10,0:10:41.07:41,0,266
chr10	15690359	.	G	GTTA	10726.45	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=17.059;DP=587;FS=1.407;HRun=0;HaplotypeScore=121.3358;InbreedingCoeff=0.9994;MQ=61.05;MQ0=0;MQRankSum=-4.551;QD=52.07;ReadPosRankSum=4.102;VQSLOD=7.0554;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,34:35:99:1963,105,0	0/0:10,0:10:30.09:0,30,528	0/0:27,0:25:74.06:0,74,1294	0/0:23,0:20:52.97:0,53,915	1/1:2,28:30:78.24:1401,78,0	1/1:2,19:21:60.17:1088,60,0	1/1:2,13:15:45.15:775,45,0	0/0:24,0:24:66.22:0,66,1190	0/0:18,0:18:54.19:0,54,1007	0/0:25,0:25:72.25:0,72,1339	0/0:22,0:22:66.17:0,66,1162	1/1:0,13:13:38.34:649,38,0	0/0:17,0:17:51.11:0,51,881	0/0:25,0:25:69.24:0,69,1285	1/1:1,21:22:66.22:1242,66,0	1/1:3,15:18:51.17:970,51,0	0/0:24,0:24:72.22:0,72,1278	1/1:3,18:21:55.11:1053,55,0	0/0:19,0:19:57.19:0,57,1032	0/0:16,0:16:45.15:0,45,838	0/0:38,0:38:99:0,114,1987	1/1:2,9:12:27.09:512,27,0	0/0:14,0:14:42.14:0,42,780	0/0:26,0:26:75.26:0,75,1398	1/1:1,18:19:57.20:1074,57,0	0/0:13,0:13:39.13:0,39,727	0/0:31,0:31:93.32:0,93,1733	0/0:9,0:9:24.08:0,24,447
chr10	15690360	.	G	GA	6173.33	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=18.164;DP=600;FS=1.803;HRun=0;HaplotypeScore=121.9849;InbreedingCoeff=0.9995;MQ=60.48;MQ0=0;MQRankSum=-3.033;QD=28.19;ReadPosRankSum=3.560;VQSLOD=4.9350;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,34:37:99:1157,111,0	0/0:10,0:10:30.10:0,30,418	0/0:28,0:26:75.19:0,75,997	0/0:23,0:19:54.04:0,54,711	1/1:2,28:30:69.66:715,70,0	1/1:2,19:21:60.11:615,60,0	1/1:4,13:17:35.80:338,36,0	0/0:24,0:24:69.22:0,69,935	0/0:18,0:18:54.18:0,54,755	0/0:25,0:25:72.24:0,72,1007	0/0:22,0:22:63.21:0,63,878	1/1:3,13:16:48.06:487,48,0	0/0:17,0:17:48.16:0,48,670	0/0:27,0:27:72.23:0,72,989	1/1:4,21:25:75.18:820,75,0	1/1:3,15:18:48.05:500,48,0	0/0:23,0:23:69.22:0,69,946	1/1:5,18:23:66.11:670,66,0	0/0:19,0:19:54.18:0,54,755	0/0:15,0:15:45.15:0,45,628	0/0:36,0:36:99:0,105,1466	1/1:3,9:13:30.06:316,30,0	0/0:14,0:14:42.14:0,42,585	0/0:26,0:26:75.25:0,75,1048	1/1:1,18:19:53.71:556,54,0	0/0:13,0:13:39.13:0,39,545	0/0:32,0:32:93.31:0,93,1300	0/0:9,0:9:24.08:0,24,335
chr10	15690716	.	TTTTG	T	4786.76	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=14.619;DP=612;FS=16.117;HRun=0;HaplotypeScore=126.2979;InbreedingCoeff=0.9854;MQ=71.99;MQ0=0;MQRankSum=-14.343;QD=29.55;ReadPosRankSum=-0.483;VQSLOD=3.8856;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,17:19:48.03:709,48,0	0/0:10,0:10:21.07:0,21,485	0/0:37,0:33:69.69:0,70,1453	0/0:23,0:21:39.13:0,39,835	1/1:4,19:23:48.12:767,48,0	1/1:4,9:12:30.06:465,30,0	1/1:8,12:20:21.07:356,21,0	0/0:32,0:32:63.20:0,63,1404	0/0:20,0:20:57.18:0,57,1352	0/0:34,0:34:87.29:0,87,2096	0/0:19,0:19:51.18:0,51,1264	1/1:3,6:9:15.05:254,15,0	0/0:26,0:26:60.17:0,60,1364	0/0:21,0:21:48.16:0,48,1196	1/1:8,9:17:30.07:466,30,0	1/1:6,8:14:24.08:396,24,0	0/0:31,0:31:60.18:0,60,1383	1/1:9,3:12:9.03:153,9,0	0/0:19,0:19:34.35:0,34,773	0/0:23,0:23:54.15:0,54,1227	0/0:34,0:34:96.28:0,96,2208	1/1:6,5:11:21.06:331,21,0	0/0:24,0:24:66.21:0,66,1515	0/0:29,0:29:81.23:0,81,1902	1/1:5,19:24:57.15:891,57,0	0/0:29,0:29:81.26:0,81,1888	0/0:32,0:32:78.27:0,78,1925	0/0:7,0:7:18.06:0,18,417
chr10	15690847	.	C	CAGGT	10568.38	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=16.677;DP=576;FS=27.710;HRun=0;HaplotypeScore=150.8340;InbreedingCoeff=0.9993;MQ=71.80;MQ0=0;MQRankSum=-17.051;QD=55.62;ReadPosRankSum=-0.325;VQSLOD=3.6909;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,14:23:45.15:1129,45,0	0/0:10,0:10:27.09:0,27,503	0/0:14,0:14:32.70:0,33,558	0/0:13,0:13:30.07:0,30,512	1/1:7,17:24:33.11:873,33,0	1/1:10,17:27:51.17:1314,51,0	1/1:5,7:12:27.09:696,27,0	0/0:27,0:27:57.19:0,57,1017	0/0:23,0:23:63.20:0,63,1144	0/0:24,0:24:63.21:0,63,1146	0/0:12,0:12:33.11:0,33,616	1/1:6,14:21:54.18:1392,54,0	0/0:22,0:22:63.20:0,63,1140	0/0:21,0:21:60.21:0,60,1118	1/1:1,16:18:48.16:1269,48,0	1/1:5,11:16:39.13:1013,39,0	0/0:36,0:35:99:0,102,1885	1/1:5,7:12:30.10:799,30,0	0/0:20,0:20:57.20:0,57,1040	0/0:25,0:25:69.24:0,69,1277	0/0:45,0:45:99:0,129,2344	1/1:7,15:22:45.15:1128,45,0	0/0:14,0:14:36.12:0,36,672	0/0:28,0:30:87.28:0,87,1559	1/1:3,12:14:36.12:957,36,0	0/0:18,0:18:54.19:0,54,1003	0/0:20,0:20:57.17:0,57,1029	0/0:12,0:12:33.11:0,33,616
chr10	15692728	.	ACCC	A	4494.66	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=4.202;DP=509;FS=12.450;HRun=10;HaplotypeScore=81.5133;InbreedingCoeff=0.9693;MQ=68.15;MQ0=1;MQRankSum=-1.560;QD=31.88;ReadPosRankSum=4.913;VQSLOD=2.6219;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,31:35:72.22:982,72,0	0/0:6,0:9:27.04:0,27,416	0/0:16,0:17:24.05:0,24,416	0/0:10,0:10:6.08:0,6,230	0/0:4,0:18:47.86:0,48,398	0/0:3,0:20:56.82:0,57,467	0/0:4,0:23:65.76:0,66,512	0/0:24,0:24:46.38:0,46,829	0/0:20,0:21:48.64:0,49,961	0/0:12,0:12:27.05:0,27,469	0/0:17,0:18:48.14:0,48,943	1/1:2,19:21:57.18:778,57,0	0/0:16,0:17:41.68:0,42,791	0/0:18,0:19:51.62:0,52,949	1/1:2,11:13:36.12:491,36,0	1/1:1,17:18:42.14:573,42,0	0/0:29,0:29:78.27:0,78,1617	1/1:2,16:18:33.10:450,33,0	0/0:12,0:13:33.09:0,33,575	0/0:4,0:9:9.50:0,10,131	0/0:18,0:41:66.16:0,66,999	1/1:1,14:15:39.12:532,39,0	0/0:14,0:15:39.10:0,39,710	0/0:14,0:16:42.10:0,42,793	1/1:1,20:21:51.16:689,51,0	0/0:15,0:17:48.11:0,48,830	0/0:11,0:11:24.08:0,24,485	0/0:7,0:7:18.04:0,18,335
chr10	15693329	.	C	CAG	812.28	PASS	AB=1.000;AC=8;AF=0.148;AN=54;BaseQRankSum=-2.728;DP=429;FS=12.184;HRun=0;HaplotypeScore=111.7682;InbreedingCoeff=0.6333;MQ=60.54;MQ0=6;MQRankSum=0.098;QD=10.98;ReadPosRankSum=0.341;VQSLOD=2.8954;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:12.37:0,12,101	0/0:5,0:5:8.19:0,8,46	0/0:27,0:19:29.55:0,30,314	0/0:31,0:14:10.85:0,11,128	1/1:15,3:19:20.82:296,21,0	1/1:14,2:16:26.67:244,27,0	1/1:12,4:16:32.98:407,33,0	0/0:11,0:10:13.25:0,13,125	0/0:14,0:14:8.19:0,8,44	0/0:8,0:8:12.02:0,12,140	0/0:7,0:7:2.60:0,3,10	0/0:9,0:9:5.90:0,6,42	0/0:12,0:12:7.98:0,8,59	0/0:22,0:22:29.04:0,29,241	0/0:15,0:15:9.47:0,9,81	0/0:15,0:15:17.92:0,18,170	0/0:20,0:20:25.18:0,25,210	0/0:15,0:15:7.13:0,7,45	0/0:18,0:17:12.87:0,13,178	0/0:15,0:15:8.98:0,9,74	0/0:17,0:17:9.88:0,10,77	0/1:9,0:9:0.01:0,0,0	0/0:5,0:5:3:0,3,25	0/0:31,0:31:4.87:0,5,198	0/1:14,0:13:0.03:0,0,0	0/0:18,0:18:17:0,17,115	0/0:15,0:15:8.49:0,8,79	./.
chr10	15693330	.	A	AG	561.81	PASS	AB=0.854;AC=33;AF=0.611;AN=54;BaseQRankSum=0.145;DP=492;FS=16.066;HRun=10;HaplotypeScore=128.0702;InbreedingCoeff=0.0003;MQ=59.38;MQ0=7;MQRankSum=-1.248;QD=1.34;ReadPosRankSum=0.648;VQSLOD=-0.1967;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:24:5.60:30,6,0	0/1:2,2:5:0.83:27,0,1	0/0:24,0:16:23.92:0,24,192	0/1:31,0:13:1.40:1,0,101	1/1:21,0:21:12.68:54,13,0	0/1:18,0:18:1.12:39,0,1	1/1:15,0:15:2.72:61,3,0	0/1:9,3:11:14.71:15,0,19	1/1:7,9:16:6.02:64,6,0	0/0:8,1:9:5.99:0,6,49	1/1:5,3:8:3.01:32,3,0	1/1:12,0:12:0.47:2,0,0	0/1:12,8:20:18.08:26,0,18	0/1:25,4:28:15.69:55,0,16	1/1:17,0:17:0.44:1,0,0	0/0:19,0:19:0.76:0,1,22	0/1:17,9:26:34.27:80,0,34	1/1:17,0:17:2.51:8,3,0	0/1:21,0:20:11.89:40,0,12	0/0:16,0:16:0.33:0,0,1	1/1:20,0:20:2.67:23,3,0	1/1:11,0:11:0.56:2,1,0	0/0:6,0:6:2.98:0,3,22	0/1:25,14:40:28.46:28,0,81	0/1:17,0:16:0.10:0,0,0	1/1:14,7:21:5.91:64,6,0	0/1:13,3:16:34.38:43,0,34	./.
chr10	15693340	.	GA	G	1410.66	PASS	AB=0.969;AC=20;AF=0.357;AN=56;BaseQRankSum=-0.532;DP=452;FS=6.725;HRun=1;HaplotypeScore=60.8489;InbreedingCoeff=0.7893;MQ=58.37;MQ0=17;MQRankSum=-1.793;QD=8.65;ReadPosRankSum=-3.187;VQSLOD=-0.3610;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:23:29.86:206,30,0	0/0:6,0:6:9.91:0,10,114	0/0:23,0:12:20.42:0,20,262	0/0:38,0:12:12.24:0,12,197	0/0:22,0:22:25.29:0,25,291	0/0:9,0:9:6.27:0,6,168	0/0:12,1:13:13.01:0,13,248	0/0:12,0:10:23.80:0,24,220	0/0:20,0:20:38.25:0,38,307	0/0:15,0:13:27.02:0,27,274	0/0:6,0:6:5.11:0,5,39	1/1:11,1:12:20.04:141,20,0	0/0:19,0:19:26.48:0,26,244	0/0:20,1:20:35.46:0,35,287	1/1:11,0:11:16.33:118,16,0	0/1:14,1:15:11.41:208,0,11	0/1:20,0:20:1.22:1,0,190	1/1:12,0:11:12.87:114,13,0	1/1:12,3:14:14.33:247,14,0	1/1:11,0:11:17.10:107,17,0	1/1:19,1:20:38.63:326,39,0	1/1:6,2:8:9.52:74,10,0	0/0:13,0:11:26.97:0,27,236	0/0:35,0:35:50.21:0,50,504	1/1:15,0:14:8.32:72,8,0	0/0:21,0:21:41.36:0,41,416	0/0:14,0:14:35.90:0,36,395	0/0:2,0:2:5.99:0,6,49
chr10	15693368	.	GAGAGAGAGACAGAC	G	1162	PASS	AC=18;AF=0.346;AN=52;BaseQRankSum=-1.155;DP=580;FS=0.000;HRun=0;HaplotypeScore=173.8502;InbreedingCoeff=0.7726;MQ=51.82;MQ0=27;MQRankSum=-1.739;QD=7.00;ReadPosRankSum=-3.017;VQSLOD=2.0733;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:32,0:27:18.04:437,18,0	0/0:6,0:6:12.04:0,12,763	./.	0/0:42,0:5:0.47:0,0,1	1/1:14,12:26:4.37:87,4,0	1/1:12,0:12:9.03:203,9,0	1/1:14,0:13:9.03:173,9,0	0/0:28,0:24:12.04:0,12,214	0/0:30,0:30:66.23:0,66,3109	0/0:24,0:23:42.12:0,42,1357	0/0:10,0:10:18.06:0,18,743	1/1:12,0:12:7.74:138,8,0	0/0:22,0:22:45.15:0,45,1925	0/0:21,0:21:42.14:0,42,1803	1/1:8,11:19:3.01:104,3,0	1/1:13,0:13:3.01:75,3,0	0/0:23,0:23:42.12:0,42,1986	1/1:7,6:12:3.01:110,3,0	0/0:22,0:18:28.33:0,28,964	0/0:14,0:14:15.05:0,15,488	0/0:37,0:37:32.37:0,32,2276	1/1:10,15:25:1.74:4,2,0	0/0:18,0:15:18.06:0,18,595	0/0:39,0:39:56.52:0,57,2465	./.	0/0:24,0:24:36.11:0,36,1042	0/0:22,0:22:45.15:0,45,1521	0/0:3,0:3:9.03:0,9,428
chr10	15693378	.	C	CAG	470.77	PASS	AB=0.815;AC=7;AF=0.125;AN=56;BaseQRankSum=5.323;DP=599;FS=0.000;HRun=0;HaplotypeScore=92.3950;InbreedingCoeff=-0.0669;MQ=52.81;MQ0=21;MQRankSum=-1.090;QD=3.36;ReadPosRankSum=-1.424;VQSLOD=1.7864;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:19,13:27:99:254,0,282	0/0:6,0:6:15.05:0,15,205	0/0:12,0:2:3.01:0,3,43	0/1:28,0:3:0:0,0,0	0/1:24,0:24:21.49:21,0,277	0/1:7,6:13:99:127,0,141	0/1:10,6:15:60.17:60,0,235	0/0:33,0:28:74.83:0,75,1013	0/0:30,0:30:81.25:0,81,1116	0/0:27,0:26:78.24:0,78,1082	0/0:11,0:11:23.97:0,24,341	0/1:8,7:16:78.40:78,0,193	0/0:28,0:28:69.12:0,69,939	0/0:22,0:22:57.19:0,57,805	0/0:19,0:19:12.72:0,13,201	0/1:10,1:11:51.66:52,0,174	0/0:25,0:25:52.73:0,53,728	0/0:11,0:11:5.28:0,5,60	0/0:23,0:18:54.16:0,54,741	0/0:17,0:17:39.05:0,39,513	0/0:43,0:43:88:0,88,1427	0/0:23,0:23:12.04:0,12,172	0/0:16,0:15:39.12:0,39,536	0/0:40,0:40:87.25:0,87,1186	0/0:7,8:16:7.88:0,8,123	0/0:31,0:30:81.04:0,81,1055	0/0:23,0:23:66.21:0,66,912	0/0:3,0:3:9.03:0,9,129
chr10	15694622	.	AAG	A	6663.16	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=11.528;DP=635;FS=1.472;HRun=0;HaplotypeScore=76.2435;InbreedingCoeff=0.9069;MQ=57.81;MQ0=30;MQRankSum=1.470;QD=17.44;ReadPosRankSum=2.525;VQSLOD=4.4396;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:69.24:0,69,1100	1/1:2,3:5:8.97:93,9,0	0/0:41,0:13:0.48:0,0,41	0/0:57,0:9:2.70:0,3,47	1/1:3,15:18:32.98:355,33,0	1/1:6,22:28:33.10:405,33,0	1/1:5,17:22:33.06:389,33,0	1/1:10,12:22:32.38:366,32,0	1/1:8,17:24:20.85:258,21,0	1/1:4,18:22:48.11:562,48,0	1/1:2,11:13:18.06:222,18,0	0/0:19,0:19:39.12:0,39,605	1/1:4,13:17:21.07:258,21,0	1/1:4,16:19:18.06:222,18,0	0/0:26,0:26:63.21:0,63,1005	0/0:18,0:18:24.08:0,24,387	1/1:6,24:30:39.12:480,39,0	0/0:17,0:17:39.12:0,39,575	1/1:2,10:11:30.08:355,30,0	1/1:3,14:17:29.05:305,29,0	1/1:5,17:22:27.03:315,27,0	0/0:16,0:16:36.12:0,36,583	1/1:1,9:10:9.01:111,9,0	1/1:7,29:35:45.14:554,45,0	0/0:17,0:17:48.16:0,48,772	1/1:6,23:28:66.19:797,66,0	1/1:7,19:26:33.09:395,33,0	1/1:0,8:8:18.06:222,18,0
chr10	15694740	.	G	GACACAC	2598.34	PASS	AB=1.000;AC=31;AF=0.574;AN=54;BaseQRankSum=3.584;DP=628;FS=8.571;HRun=0;HaplotypeScore=171.3422;InbreedingCoeff=0.6688;MQ=67.94;MQ0=20;MQRankSum=-3.776;QD=8.78;ReadPosRankSum=-1.413;VQSLOD=1.7600;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:24:5.18:42,5,0	1/1:9,0:9:19.99:157,20,0	0/0:69,0:27:40.95:0,41,648	0/0:113,0:47:16.52:0,17,838	0/1:24,0:23:0.09:0,0,0	1/1:16,0:16:20.87:406,21,0	1/1:24,0:19:9.34:137,9,0	1/1:29,0:27:41.51:573,42,0	0/0:23,0:23:20.96:0,21,211	1/1:14,0:13:31.06:315,31,0	1/1:15,0:15:2.86:25,3,0	0/0:10,0:10:5.99:0,6,48	0/0:15,0:15:10.94:0,11,232	0/0:13,0:13:4.23:0,4,26	0/1:24,0:24:21.30:24,0,21	0/1:16,0:15:11.15:11,0,13	1/1:7,0:7:8.82:54,9,0	1/1:23,0:23:2.59:10,3,0	0/0:12,0:12:27.02:0,27,489	0/0:10,0:10:24.08:0,24,519	0/0:27,0:27:61.99:0,62,1274	1/1:20,0:20:5.99:50,6,0	./.	0/0:26,0:26:31.65:0,32,233	1/1:11,0:11:11.78:73,12,0	1/1:14,7:19:21:408,21,0	1/1:17,0:17:29.84:460,30,0	1/1:2,0:2:5.98:47,6,0
chr10	15694746	.	CAGAGAGAGAG	C	1701.86	PASS	AB=0.956;AC=26;AF=0.481;AN=54;BaseQRankSum=2.661;DP=584;FS=0.000;HRun=0;HaplotypeScore=172.5501;InbreedingCoeff=0.0304;MQ=64.21;MQ0=18;MQRankSum=-2.124;QD=4.69;ReadPosRankSum=1.971;VQSLOD=1.8864;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,20:23:9.03:199,9,0	0/1:8,0:8:9.49:9,0,176	0/0:49,0:20:34.36:0,34,345	0/0:98,0:40:36.22:0,36,366	0/1:23,0:22:0:0,0,0	0/1:15,0:16:80.09:80,0,156	0/1:23,0:19:1.15:38,0,1	0/1:28,0:26:20.25:29,0,20	0/1:23,0:23:38.93:287,0,39	0/1:13,0:12:4.85:5,0,241	0/1:17,0:17:0.02:0,0,0	1/1:0,11:11:6.02:197,6,0	0/1:14,0:14:52.70:147,0,53	0/1:13,0:13:13.47:67,0,13	1/1:3,1:24:12.04:214,12,0	1/1:4,12:15:6.02:135,6,0	0/0:7,0:7:1.13:0,1,45	1/1:2,18:20:0.22:59,0,0	0/0:12,0:12:29.78:0,30,676	0/0:8,0:9:27.08:0,27,692	0/0:27,0:28:52.46:0,52,1699	0/1:3,15:19:0.07:0,0,0	./.	0/1:24,0:24:32.54:136,0,33	1/1:3,10:13:12.04:143,12,0	0/1:18,0:16:46.40:46,0,254	0/1:15,0:16:62.39:62,0,231	0/0:3,0:3:1.24:0,1,3
chr10	15694750	.	GAGAGAGAGAC	G	1937.85	PASS	AB=1.000;AC=28;AF=0.500;AN=56;BaseQRankSum=-1.478;DP=542;FS=9.899;HRun=0;HaplotypeScore=160.7523;InbreedingCoeff=0.4155;MQ=63.81;MQ0=18;MQRankSum=-2.065;QD=6.59;ReadPosRankSum=0.150;VQSLOD=2.2341;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:22:8.96:150,9,0	0/0:7,0:7:17.92:0,18,254	0/0:44,0:17:19.12:0,19,128	0/0:92,0:39:6.72:0,7,112	0/1:19,0:18:0:0,0,0	0/1:16,0:16:74.90:75,0,175	0/0:20,0:15:2.96:0,3,19	0/1:18,0:16:76.81:126,0,77	1/1:3,18:21:12.04:373,12,0	0/0:12,0:11:29.73:0,30,324	0/1:14,0:14:0:0,0,0	1/1:11,0:11:6.02:162,6,0	1/1:14,1:15:23.97:326,24,0	1/1:1,12:13:3.01:91,3,0	1/1:22,0:22:11.89:149,12,0	1/1:15,0:14:6.01:99,6,0	0/0:7,0:7:9.67:0,10,62	0/1:20,0:20:31.73:32,0,32	0/0:11,0:11:23.52:0,24,462	0/0:11,0:11:27:0,27,562	0/0:29,0:29:61.47:0,61,1202	0/1:17,0:17:0:0,0,0	1/1:15,0:15:2.22:7,2,0	1/1:26,1:27:32.94:419,33,0	1/1:13,0:13:11.77:72,12,0	0/1:13,0:11:25.08:25,0,229	0/0:13,0:13:2.98:0,3,207	0/1:3,0:3:7.96:8,0,13
chr10	15694758	.	GAC	G	972.69	PASS	AB=0.946;AC=25;AF=0.463;AN=54;BaseQRankSum=0.122;DP=518;FS=6.736;HRun=0;HaplotypeScore=124.0729;InbreedingCoeff=0.1412;MQ=58.57;MQ0=19;MQRankSum=-2.514;QD=3.50;ReadPosRankSum=0.895;VQSLOD=2.3187;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:22:12.74:15,0,13	0/1:9,0:9:8.97:9,0,108	0/0:34,0:12:16.63:0,17,121	0/0:69,0:27:5.01:0,5,134	0/1:21,0:20:0:0,0,0	0/1:16,0:15:24.18:42,0,24	0/0:18,1:13:2.96:0,3,19	0/1:10,9:16:69.07:154,0,69	1/1:19,0:19:11.87:80,12,0	0/1:14,0:12:98.90:99,0,118	0/1:10,6:16:0:0,0,0	1/1:12,0:12:4.59:14,5,0	1/1:10,0:10:23.78:172,24,0	1/1:13,0:13:2.92:17,3,0	1/1:22,0:22:11.34:65,11,0	1/1:15,0:14:2.20:16,2,0	0/0:9,0:9:3.50:0,3,19	0/0:21,0:21:11.82:0,12,86	0/0:11,0:11:22.67:0,23,160	0/0:12,0:12:2.03:0,2,183	0/0:31,0:31:42.86:0,43,467	0/0:19,0:19:5.95:0,6,44	./.	0/1:25,0:25:16.31:171,0,16	0/1:14,0:14:1.22:57,0,1	1/1:13,0:11:26.07:163,26,0	0/1:12,0:12:36.76:45,0,37	0/1:6,0:4:12.05:12,0,13
chr10	15694760	.	C	CAG	502.18	PASS	AB=0.987;AC=19;AF=0.396;AN=48;BaseQRankSum=-0.677;DP=531;FS=0.000;HRun=0;HaplotypeScore=137.0965;InbreedingCoeff=0.1762;MQ=56.08;MQ0=21;MQRankSum=0.711;QD=2.25;ReadPosRankSum=0.069;VQSLOD=2.5038;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:21:5.94:40,6,0	0/1:9,1:10:2.93:71,0,3	./.	./.	0/1:22,0:21:0:0,0,0	1/1:21,0:20:6.62:37,7,0	0/0:18,1:13:0:0,0,0	./.	0/0:19,0:19:2.42:0,2,5	0/0:15,0:13:6.13:0,6,32	./.	0/0:13,0:13:5.58:0,6,27	0/0:10,0:10:2.04:0,2,6	0/1:15,0:15:13.74:35,0,14	0/0:22,0:22:0.81:0,1,1	0/0:15,0:14:2.04:0,2,6	0/0:10,0:10:2.16:0,2,8	0/0:22,0:22:1.24:0,1,3	1/1:11,1:12:9.25:72,9,0	0/1:12,0:12:34.51:35,0,58	0/1:31,0:31:24.45:158,0,24	0/0:18,0:19:5.84:0,6,43	1/1:17,0:17:3.01:30,3,0	1/1:22,2:24:6.82:89,7,0	0/0:14,0:14:2.90:0,3,16	0/1:15,0:13:8.86:9,0,12	1/1:14,0:13:0.14:51,0,0	0/1:9,0:6:0:0,0,0
chr10	15695051	.	TCTC	T	7460.93	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=14.052;DP=606;FS=0.707;HRun=0;HaplotypeScore=94.2954;InbreedingCoeff=0.9968;MQ=83.21;MQ0=0;MQRankSum=-4.225;QD=36.22;ReadPosRankSum=-1.045;VQSLOD=5.2814;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:58:99:0,165,3533	1/1:0,9:9:27.05:419,27,0	0/0:17,0:17:45.15:0,45,974	0/0:29,0:29:71:0,71,1489	1/1:1,14:15:29.84:319,30,0	1/1:0,15:15:36.12:598,36,0	1/1:1,19:20:45.15:739,45,0	1/1:5,29:34:81.20:1197,81,0	0/0:15,0:15:45.14:0,45,975	1/1:3,8:11:24.08:396,24,0	1/1:1,13:14:32.90:425,33,0	0/0:19,0:19:57.20:0,57,1289	0/0:20,0:20:51.17:0,51,1131	0/0:12,0:12:33.11:0,33,748	0/0:22,0:22:63.21:0,63,1384	0/0:12,0:12:33.07:0,33,657	1/1:0,48:48:99:1747,105,0	0/0:25,0:25:75.26:0,75,1697	0/0:31,0:31:84.27:0,84,1735	0/0:14,0:14:39.13:0,39,882	0/0:67,0:67:99:0,190,4171	0/0:10,0:10:30.10:0,30,679	0/0:7,0:7:15.05:0,15,340	0/0:30,0:30:87.30:0,87,1967	0/0:12,0:12:36.11:0,36,773	1/1:2,10:12:30.08:472,30,0	1/1:0,14:14:36.12:599,36,0	1/1:0,14:14:33.11:549,33,0
chr10	15695136	.	AACCGTGCACGTTTGCAGCGTGTCAC	A	13051.04	PASS	AC=34;AF=0.630;AN=54;BaseQRankSum=9.608;DP=519;FS=2.456;HRun=0;HaplotypeScore=334.8916;InbreedingCoeff=0.8683;MQ=77.85;MQ0=0;MQRankSum=-9.895;QD=44.09;ReadPosRankSum=1.032;VQSLOD=3.2535;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:23,10:33:21.07:1302,21,0	./.	0/0:18,0:18:12.50:0,13,178	0/0:13,0:13:6.02:0,6,154	1/1:13,3:16:11.98:590,12,0	1/1:10,4:14:9.03:586,9,0	1/1:17,0:17:6:73,6,0	1/1:25,3:28:9.02:165,9,0	0/0:20,0:20:51.17:0,51,4553	1/1:15,3:19:15.05:859,15,0	1/1:7,4:11:15.05:901,15,0	1/1:6,10:16:24.08:1563,24,0	0/0:19,0:19:51.16:0,51,4067	0/0:19,0:19:42.13:0,42,3306	1/1:12,5:17:9.03:586,9,0	1/1:7,6:13:18.06:1172,18,0	1/1:23,3:26:6.02:391,6,0	1/1:13,7:20:9.03:525,9,0	0/0:31,0:31:36.11:0,36,2518	0/0:13,0:13:30.10:0,30,2912	0/0:55,0:55:99:0,102,8629	1/1:9,2:10:6.02:391,6,0	0/0:17,0:17:39.10:0,39,3414	0/0:18,0:18:51.18:0,51,4664	1/1:9,12:21:30.10:1941,30,0	1/1:11,3:14:15.05:788,15,0	1/1:6,5:11:18.04:1001,18,0	1/1:8,1:9:5.99:217,6,0
chr10	15695673	.	TCTTC	T	8564.23	PASS	AB=0.814;AC=36;AF=0.643;AN=56;BaseQRankSum=0.880;DP=541;FS=11.270;HRun=0;HaplotypeScore=111.4848;InbreedingCoeff=0.8663;MQ=63.89;MQ0=3;MQRankSum=0.783;QD=21.90;ReadPosRankSum=1.298;VQSLOD=4.2314;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,18:27:17.55:458,18,0	1/1:2,10:12:20.91:323,21,0	0/1:13,0:5:0:0,0,0	0/0:12,0:9:8.06:0,8,81	1/1:3,26:29:68.83:970,69,0	1/1:2,22:24:30.10:509,30,0	1/1:3,16:19:12.04:202,12,0	1/1:12,11:23:35.97:427,36,0	0/0:21,0:21:54.15:0,54,1007	1/1:7,29:35:87.16:1238,87,0	1/1:1,18:19:47.70:610,48,0	1/1:6,12:18:18.01:273,18,0	0/0:25,0:25:64.34:0,64,1048	0/0:18,0:18:43.33:0,43,671	1/1:3,18:21:28.21:461,28,0	0/1:9,13:22:52.90:237,0,53	1/1:6,22:28:36.01:545,36,0	1/1:3,18:21:18.02:305,18,0	0/0:13,0:13:21.07:0,21,451	0/0:16,0:16:39.11:0,39,842	0/0:19,0:19:54.13:0,54,1042	1/1:3,16:19:38.78:526,39,0	0/0:14,0:14:42.13:0,42,821	0/0:12,0:12:30.07:0,30,535	1/1:2,5:7:9.03:153,9,0	1/1:2,12:14:36.08:530,36,0	1/1:3,12:15:21.03:340,21,0	1/1:0,24:24:27.09:458,27,0
chr10	15695731	.	CTTCT	C	2538.73	PASS	AC=10;AF=0.185;AN=54;BaseQRankSum=-0.971;DP=565;FS=2.392;HRun=0;HaplotypeScore=147.6277;InbreedingCoeff=0.9734;MQ=56.75;MQ0=7;MQRankSum=1.236;QD=29.18;ReadPosRankSum=2.145;VQSLOD=3.9247;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:34.35:0,34,710	0/0:9,0:9:15.05:0,15,343	0/0:12,0:5:12.04:0,12,209	./.	0/0:40,0:40:87.22:0,87,1876	0/0:22,0:22:30.07:0,30,612	0/0:18,0:18:27.09:0,27,605	0/0:22,0:22:36.07:0,36,670	1/1:18,0:18:45.13:660,45,0	0/0:42,0:41:80.44:0,80,2223	0/0:27,0:27:69.22:0,69,1520	0/0:14,0:14:33.10:0,33,650	1/1:21,2:23:51.12:750,51,0	1/1:15,4:19:42.13:647,42,0	0/0:22,0:22:48.13:0,48,1056	0/0:17,0:17:10.50:0,11,873	0/0:22,0:22:32.15:0,32,805	0/0:23,0:23:23.25:0,23,1053	0/0:18,0:16:36.10:0,36,704	0/0:32,0:32:78.73:0,79,1838	0/0:22,0:22:54.19:0,54,1300	0/0:11,0:11:17.99:0,18,333	1/1:14,0:14:18.03:233,18,0	1/1:12,1:13:27.08:422,27,0	0/0:14,0:14:33.11:0,33,661	0/0:20,0:20:48.16:0,48,1060	0/0:24,0:24:22.92:0,23,1026	0/0:20,0:19:36.10:0,36,694
chr10	15697769	.	GAAC	G	11665.82	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=15.214;DP=728;FS=1.033;HRun=0;HaplotypeScore=108.7794;InbreedingCoeff=0.9979;MQ=74.89;MQ0=4;MQRankSum=0.885;QD=28.88;ReadPosRankSum=3.377;VQSLOD=5.2964;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,108,2097	1/1:1,8:9:18.06:258,18,0	0/0:39,0:36:57.19:0,57,1065	0/0:32,0:28:48.16:0,48,953	1/1:5,22:27:48.12:664,48,0	1/1:5,11:16:30.10:430,30,0	1/1:6,15:21:36.12:515,36,0	1/1:12,24:36:72.21:994,72,0	1/1:3,17:20:42.14:601,42,0	1/1:6,24:30:75.22:1033,75,0	1/1:4,19:23:56.47:815,56,0	0/0:24,0:24:54.19:0,54,1096	1/1:7,20:27:51.17:730,51,0	1/1:2,20:22:54.18:773,54,0	0/0:14,0:14:30.10:0,30,610	0/0:20,0:20:57.20:0,57,1154	1/1:6,19:25:48.16:688,48,0	0/0:29,0:29:66.21:0,66,1283	0/0:16,0:16:39.13:0,39,774	0/0:27,1:28:20.24:0,20,1176	0/0:40,0:40:90.31:0,90,1828	0/0:22,0:22:60.17:0,60,1177	1/1:3,16:19:41.81:601,42,0	1/1:10,22:32:51.17:731,51,0	0/0:16,0:16:30.06:0,30,569	1/1:12,32:44:93.31:1329,93,0	1/1:9,28:37:71.87:1031,72,0	1/1:5,11:16:33.11:473,33,0
chr10	15698066	.	GA	G	5950.22	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=12.283;DP=616;FS=0.336;HRun=3;HaplotypeScore=59.2939;InbreedingCoeff=0.9978;MQ=64.27;MQ0=7;MQRankSum=-2.520;QD=32.51;ReadPosRankSum=2.127;VQSLOD=5.1683;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:43:99:0,120,1596	0/0:7,0:7:21.05:0,21,283	0/0:23,0:9:18.06:0,18,251	0/0:19,0:13:35.91:0,36,447	0/0:24,0:24:69.23:0,69,989	0/0:12,0:12:30.10:0,30,432	0/0:26,0:26:72.65:0,73,948	0/0:18,0:17:48.15:0,48,673	1/1:0,24:24:72.18:875,72,0	0/0:21,0:20:57.15:0,57,781	0/0:13,0:13:36.12:0,36,518	0/0:31,0:31:92.86:0,93,1240	1/1:0,19:19:57.18:706,57,0	1/1:0,18:18:51.16:632,51,0	0/0:21,0:21:57.19:0,57,813	0/0:19,0:19:51.17:0,51,734	0/0:30,0:29:90.24:0,90,1233	0/0:26,0:26:75.13:0,75,987	1/1:2,16:18:48.14:583,48,0	1/1:0,19:19:54.13:651,54,0	1/1:2,33:35:87.27:1078,87,0	0/0:19,0:19:54.13:0,54,706	1/1:1,15:16:42.13:520,42,0	1/1:1,33:34:54.30:905,54,0	0/0:22,0:22:60.20:0,60,859	0/0:25,0:25:75.23:0,75,1030	0/0:14,0:14:42.13:0,42,583	0/0:18,0:17:51.17:0,51,734
chr10	15698824	.	A	AG	6909.87	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-15.599;DP=657;FS=2.833;HRun=3;HaplotypeScore=60.3203;InbreedingCoeff=0.9903;MQ=93.22;MQ0=0;MQRankSum=-3.930;QD=35.80;ReadPosRankSum=2.402;VQSLOD=5.5796;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:93.21:0,93,1078	0/0:4,0:4:9.03:0,9,108	0/0:27,0:27:62.80:0,63,744	0/0:29,0:29:83.80:0,84,938	0/0:24,0:24:63.16:0,63,732	0/0:15,0:15:42.12:0,42,497	0/0:17,0:17:48.15:0,48,576	0/0:27,0:27:75.22:0,75,890	1/1:1,24:25:69.23:966,69,0	0/0:36,0:36:99:0,108,1261	0/0:18,0:18:54.15:0,54,636	0/0:26,0:26:75.23:0,75,899	1/1:2,14:16:42.14:588,42,0	1/1:4,29:33:87.29:1218,87,0	0/0:26,0:26:78.24:0,78,935	0/0:29,0:29:87.27:0,87,1044	0/0:27,0:27:75.23:0,75,898	0/0:16,0:16:45.14:0,45,540	1/1:1,17:18:51.17:714,51,0	1/1:4,23:27:57.15:776,57,0	1/1:2,27:29:75.25:1050,75,0	0/0:16,0:16:39.12:0,39,468	1/1:0,20:20:48.16:672,48,0	1/1:0,25:25:66.22:924,66,0	0/0:16,0:16:45.11:0,45,516	0/0:31,0:30:87.27:0,87,1044	0/0:35,0:35:99:0,102,1224	0/0:13,0:13:39.12:0,39,468
chr10	15699356	.	C	CA	13619.96	PASS	AB=0.559;AC=50;AF=0.893;AN=56;BaseQRankSum=-4.471;DP=494;FS=2.474;HRun=7;HaplotypeScore=65.0475;InbreedingCoeff=0.5554;MQ=72.77;MQ0=0;MQRankSum=-3.456;QD=28.61;ReadPosRankSum=1.968;VQSLOD=5.6457;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,23:23:60.18:722,60,0	0/1:1,8:9:7.44:196,0,7	0/0:7,0:8:6.79:0,7,50	0/0:10,0:10:13.75:0,14,115	1/1:6,25:31:75.14:867,75,0	1/1:0,14:14:33.10:399,33,0	1/1:3,12:15:30.09:362,30,0	1/1:2,18:20:54.15:634,54,0	1/1:2,10:12:33.06:382,33,0	1/1:2,21:23:63.15:718,63,0	1/1:4,21:25:57.17:689,57,0	1/1:2,12:14:24.42:354,24,0	0/1:3,7:10:4.90:229,0,5	1/1:2,9:11:27.08:326,27,0	1/1:3,20:23:54.17:652,54,0	1/1:1,14:15:36.11:435,36,0	1/1:1,20:21:48.15:580,48,0	1/1:2,24:26:66.20:797,66,0	1/1:2,13:15:44.62:515,45,0	1/1:8,25:33:75.23:905,75,0	1/1:2,12:14:27.08:326,27,0	1/1:3,12:15:39.12:470,39,0	1/1:1,22:23:69.20:807,69,0	1/1:4,11:15:1.08:281,1,0	1/1:2,14:16:10.14:406,10,0	1/1:7,20:27:63.16:734,63,0	1/1:0,16:16:45.14:544,45,0	1/1:1,9:10:24.07:290,24,0
chr10	15699373	.	CTT	C	2161.80	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=4.930;DP=490;FS=9.254;HRun=11;HaplotypeScore=108.5647;InbreedingCoeff=0.9732;MQ=65.25;MQ0=1;MQRankSum=-8.226;QD=16.63;ReadPosRankSum=0.917;VQSLOD=1.9022;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:26:60.20:0,60,897	0/0:9,0:9:21.54:0,22,324	0/0:9,0:7:12.03:0,12,152	0/0:9,0:7:6.49:0,6,76	0/0:33,0:34:83.67:0,84,1203	0/0:11,0:13:33.10:0,33,460	0/0:11,0:12:24.08:0,24,348	0/0:21,0:23:50.14:0,50,708	1/1:5,9:14:30.05:319,30,0	0/0:19,0:20:54.17:0,54,793	0/0:19,0:21:38.09:0,38,503	0/0:12,0:12:21.07:0,21,312	1/1:2,9:11:21.03:224,21,0	1/1:1,9:10:27.07:287,27,0	0/0:20,0:21:54.18:0,54,831	0/0:19,0:19:51.13:0,51,749	0/0:22,0:22:51.17:0,51,785	0/0:24,0:26:60.18:0,60,860	1/1:5,7:12:24.05:255,24,0	1/1:9,20:32:29.59:410,30,0	1/1:5,9:14:18.01:191,18,0	0/0:13,0:14:41.60:0,42,568	1/1:6,18:24:47.16:458,47,0	1/1:5,8:13:21.04:223,21,0	0/0:18,0:18:33.06:0,33,460	0/0:23,0:23:63.21:0,63,949	0/0:18,0:18:48.16:0,48,739	0/0:9,0:9:21.07:0,21,323
chr10	15699806	.	GT	G	4492.24	PASS	AB=0.874;AC=37;AF=0.661;AN=56;BaseQRankSum=3.240;DP=507;FS=9.745;HRun=12;HaplotypeScore=97.7003;InbreedingCoeff=0.6930;MQ=74.39;MQ0=5;MQRankSum=-2.243;QD=12.48;ReadPosRankSum=4.104;VQSLOD=4.0429;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,20:25:30.92:372,31,0	1/1:2,7:9:14.79:102,15,0	0/0:22,0:14:15.27:0,15,129	0/0:27,0:15:2.57:0,3,49	1/1:14,6:22:30.41:192,30,0	1/1:9,15:26:47.13:337,47,0	1/1:7,5:14:17.40:166,17,0	1/1:15,7:22:29.22:207,29,0	0/1:16,3:19:45.74:46,0,104	1/1:5,15:20:25.67:248,26,0	1/1:8,11:18:41.55:298,42,0	1/1:2,15:18:43.86:328,44,0	0/0:20,0:20:24.78:0,25,407	0/1:18,1:18:6.20:6,0,97	1/1:4,10:15:18.32:226,18,0	1/1:2,12:15:29.87:232,30,0	1/1:15,8:23:23.16:343,23,0	1/1:3,14:17:35.63:268,36,0	0/0:21,0:21:35.74:0,36,333	0/0:22,0:22:32.46:0,32,448	0/0:13,0:13:18.04:0,18,183	1/1:0,13:14:34.90:261,35,0	0/0:17,0:17:30.31:0,30,299	0/0:5,0:5:0:0,0,0	1/1:4,17:23:48.88:360,49,0	0/1:13,3:17:23.86:159,0,24	1/1:12,6:18:38.57:278,39,0	1/1:4,1:5:8.22:62,8,0
chr10	15699817	.	TTGTTTTTTTG	T	6038.74	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=-1.283;DP=530;FS=5.503;HRun=0;HaplotypeScore=170.0579;InbreedingCoeff=0.8841;MQ=68.57;MQ0=12;MQRankSum=-8.434;QD=29.46;ReadPosRankSum=-1.471;VQSLOD=4.0652;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:23:56.74:0,57,1915	1/1:7,0:7:15.03:258,15,0	0/0:30,0:17:21.78:0,22,466	0/0:26,0:12:11.94:0,12,117	1/1:10,14:24:37.97:547,38,0	1/1:29,0:29:59.07:1397,59,0	1/1:19,0:19:26.99:553,27,0	1/1:19,0:19:37.07:575,37,0	0/0:20,0:20:26.68:0,27,787	1/1:19,0:19:31.42:424,31,0	1/1:20,1:20:37.90:565,38,0	0/0:20,0:20:54.17:0,54,1654	0/0:22,0:22:49.67:0,50,1247	0/0:20,0:19:17.72:0,18,349	0/0:17,0:16:45.15:0,45,1512	0/0:16,0:16:42.14:0,42,1130	1/1:26,0:25:27.97:598,28,0	0/0:14,0:14:33.06:0,33,953	0/0:19,0:18:40.80:0,41,1397	0/0:26,0:26:45.10:0,45,1684	0/0:11,0:11:18.04:0,18,602	0/0:19,0:19:47.91:0,48,1420	0/0:16,0:16:32.85:0,33,1089	0/0:5,0:5:3.01:0,3,111	0/0:20,0:20:51.60:0,52,1352	0/1:19,0:18:99:432,0,104	1/1:18,0:17:34.31:508,34,0	1/1:4,0:4:12.03:183,12,0
chr10	15699819	.	GTTTTTTTGT	G	5857.61	PASS	AB=0.900;AC=21;AF=0.375;AN=56;BaseQRankSum=0.436;DP=511;FS=5.987;HRun=0;HaplotypeScore=158.0403;InbreedingCoeff=0.8871;MQ=66.83;MQ0=12;MQRankSum=-8.217;QD=29.29;ReadPosRankSum=-0.853;VQSLOD=4.0236;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:23:57.19:0,57,1890	1/1:5,2:7:14.97:227,15,0	0/0:26,0:13:23.58:0,24,465	0/0:24,0:11:17.68:0,18,138	1/1:15,8:23:26.02:470,26,0	1/1:4,24:29:60.07:1357,60,0	1/1:3,14:17:27.01:588,27,0	1/1:15,4:19:22.77:592,23,0	0/0:17,0:17:27.08:0,27,795	1/1:15,3:18:31.30:428,31,0	1/1:15,5:19:35.34:509,35,0	0/0:21,0:21:57.18:0,57,1779	0/0:21,0:21:42.04:0,42,1138	0/0:17,0:16:15.03:0,15,360	0/0:18,0:17:48.16:0,48,1640	0/0:16,0:16:42.14:0,42,1207	1/1:22,4:25:44.91:560,45,0	0/0:13,0:13:33.11:0,33,1013	0/0:20,0:19:45.09:0,45,1361	0/0:24,0:24:53.33:0,53,1661	0/0:11,0:11:15.05:0,15,551	0/0:19,0:19:47.94:0,48,1405	0/0:15,0:16:30.02:0,30,1028	0/0:5,0:5:3.01:0,3,118	0/0:19,0:19:51.12:0,51,1440	0/1:16,2:17:80.50:464,0,81	1/1:14,3:16:35.25:464,35,0	1/1:5,1:6:14.94:199,15,0
chr10	15699827	.	G	GTT	1581.42	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=-7.888;DP=489;FS=1.929;HRun=11;HaplotypeScore=120.0395;InbreedingCoeff=0.6290;MQ=65.90;MQ0=13;MQRankSum=3.127;QD=8.59;ReadPosRankSum=-3.059;VQSLOD=1.0344;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:23:26.74:0,27,250	0/0:6,0:6:8.64:0,9,36	0/0:26,0:13:20.33:0,20,163	0/1:24,0:12:8.07:8,0,44	0/0:22,0:23:17.77:0,18,73	0/0:28,0:28:43.95:0,44,194	0/0:15,0:15:16.62:0,17,75	0/1:9,0:19:3.89:4,0,68	1/1:5,13:18:12.03:155,12,0	0/0:10,0:12:14.94:0,15,62	0/0:14,0:20:0.29:0,0,39	0/0:20,0:20:44.58:0,45,416	1/1:8,7:18:16.52:151,17,0	1/1:5,13:17:6.49:88,6,0	0/0:18,0:17:23.99:0,24,395	0/0:17,0:17:23.89:0,24,225	0/0:13,0:21:6.82:0,7,38	0/0:14,0:14:14.88:0,15,145	1/1:8,10:17:33.04:401,33,0	1/1:6,6:21:37.66:384,38,0	1/1:1,8:11:12.04:159,12,0	0/0:21,0:21:35.65:0,36,331	1/1:3,12:18:27.05:356,27,0	1/1:0,6:6:3.01:43,3,0	0/0:18,0:18:26.14:0,26,239	0/1:8,0:12:22.07:22,0,23	0/0:11,0:14:3.26:0,3,28	0/0:6,0:6:4.28:0,4,16
chr10	15699926	.	TG	T	4065.86	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=7.514;DP=477;FS=5.186;HRun=8;HaplotypeScore=89.3291;InbreedingCoeff=0.9926;MQ=77.76;MQ0=0;MQRankSum=-9.968;QD=24.35;ReadPosRankSum=-0.444;VQSLOD=3.9122;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:45.14:0,45,544	1/1:1,6:7:18.03:173,18,0	0/0:21,0:21:36.40:0,36,424	0/0:17,0:13:23.83:0,24,221	1/1:4,16:20:53.96:495,54,0	1/1:3,11:14:33:308,33,0	1/1:1,9:10:27.04:260,27,0	1/1:5,23:28:66.10:637,66,0	0/0:32,0:32:93.24:0,93,1078	1/1:3,10:13:30.04:289,30,0	1/1:1,8:9:26.99:246,27,0	0/0:23,0:23:63.06:0,63,678	0/0:25,0:25:69.19:0,69,809	0/0:19,0:19:48.15:0,48,580	0/0:24,0:24:66.20:0,66,797	0/0:19,0:19:57.16:0,57,668	1/1:3,16:19:50.26:471,50,0	0/0:14,0:14:42.04:0,42,474	0/0:10,0:10:18.05:0,18,208	0/0:20,0:20:51.13:0,51,594	0/0:21,0:21:60.18:0,60,725	0/0:9,0:10:29.92:0,30,340	0/0:13,0:13:36.10:0,36,424	0/0:16,0:16:48.14:0,48,569	0/0:9,0:9:15.03:0,15,170	1/1:3,14:17:42.06:405,42,0	1/1:1,19:20:60.03:562,60,0	1/1:2,8:10:15.72:221,16,0
chr10	15699949	.	G	GTT	4557.08	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=5.498;DP=475;FS=17.871;HRun=4;HaplotypeScore=107.5318;InbreedingCoeff=0.9152;MQ=63.38;MQ0=0;MQRankSum=-7.189;QD=23.25;ReadPosRankSum=-3.083;VQSLOD=1.7146;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:54.15:0,54,620	1/1:1,5:6:11.97:178,12,0	0/1:11,0:11:4.43:4,0,164	0/0:13,0:9:17.81:0,18,208	1/1:6,16:23:47.36:643,47,0	1/1:6,6:15:5.02:318,5,0	1/1:4,9:15:35.19:449,35,0	1/1:17,6:24:26.18:313,26,0	0/0:28,0:28:21.86:0,22,361	1/1:10,3:15:29.53:321,30,0	1/1:3,8:12:21.07:277,21,0	0/0:17,0:17:36.03:0,36,377	0/0:17,0:17:43.81:0,44,302	0/0:21,0:21:12.17:0,12,292	0/0:23,0:23:66.18:0,66,805	0/0:15,0:15:42.10:0,42,465	1/1:5,16:21:32.36:476,32,0	0/0:13,0:13:35.96:0,36,408	0/0:9,0:9:24.48:0,24,139	0/0:17,0:17:39.38:0,39,269	0/0:26,0:27:44.92:0,45,363	0/0:14,0:14:41.84:0,42,472	0/0:16,0:16:39.68:0,40,260	0/0:16,0:16:42.74:0,43,306	0/0:14,0:14:21.05:0,21,231	1/1:7,10:19:30.02:453,30,0	1/1:11,12:24:50.23:759,50,0	1/1:2,7:11:26.49:366,26,0
chr10	15699950	.	G	GT	4612.31	PASS	AB=0.947;AC=39;AF=0.696;AN=56;BaseQRankSum=1.592;DP=481;FS=0.000;HRun=9;HaplotypeScore=99.9517;InbreedingCoeff=0.7151;MQ=63.20;MQ0=0;MQRankSum=-5.050;QD=13.37;ReadPosRankSum=-3.550;VQSLOD=3.9505;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,17:20:45.12:498,45,0	1/1:6,0:6:11.36:58,11,0	0/1:9,1:10:13.11:49,0,13	0/1:13,1:10:24.15:24,0,41	1/1:23,0:23:44.91:257,45,0	1/1:15,0:15:12.13:168,12,0	1/1:15,0:15:37.66:232,38,0	1/1:25,0:25:21.02:124,21,0	0/0:28,0:28:26.54:0,27,213	1/1:16,0:16:24.83:167,25,0	1/1:12,0:12:23.33:128,23,0	1/1:2,15:17:30.07:322,30,0	0/0:17,0:17:11.92:0,12,145	0/0:21,0:21:33.10:0,33,193	1/1:5,18:23:28.10:538,28,0	1/1:1,14:15:39.11:431,39,0	1/1:24,0:24:39.10:192,39,0	1/1:4,9:13:7.53:298,8,0	0/0:9,0:9:11.03:0,11,61	0/0:17,0:17:34.31:0,34,162	0/0:28,0:28:15.91:0,16,175	1/1:4,10:14:27.07:294,27,0	0/1:16,0:16:14.92:15,0,104	0/0:16,0:16:39.45:0,39,200	1/1:0,13:14:21.06:232,21,0	1/1:20,0:20:30.30:185,30,0	1/1:22,0:22:48.90:271,49,0	1/1:11,0:11:25.60:129,26,0
chr10	15700161	.	ATTCTCTAAT	A	6749.62	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=13.233;DP=439;FS=2.070;HRun=0;HaplotypeScore=123.7638;InbreedingCoeff=0.9527;MQ=77.95;MQ0=0;MQRankSum=-10.393;QD=45.30;ReadPosRankSum=-0.330;VQSLOD=4.7777;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:72.25:0,72,3210	1/1:1,2:3:3.01:86,3,0	0/0:14,0:14:27.09:0,27,1163	0/0:21,0:21:39.10:0,39,1429	1/1:3,9:12:18.06:425,18,0	1/1:3,17:20:45.15:1241,45,0	1/1:4,12:16:24.08:621,24,0	1/1:3,14:17:42.12:807,42,0	0/0:24,0:24:57.13:0,57,2343	1/1:3,12:15:30.06:721,30,0	1/1:0,9:9:15.05:360,15,0	0/0:9,0:9:24.08:0,24,1021	0/0:19,0:19:48.16:0,48,2177	0/0:14,0:14:30.10:0,30,1395	0/0:17,0:17:45.14:0,45,1863	0/0:17,0:17:48.15:0,48,2128	1/1:4,12:16:18.06:468,18,0	0/0:25,0:25:69.24:0,69,2675	0/0:17,0:17:39.11:0,39,1463	0/0:14,0:14:30.10:0,30,1147	0/0:17,0:17:48.16:0,48,2075	0/0:19,0:19:57.19:0,57,2272	0/0:12,0:12:36.12:0,36,1429	0/0:15,0:15:39.13:0,39,1662	0/0:6,0:6:18.06:0,18,749	1/1:3,16:19:48.14:1074,48,0	1/1:4,12:16:26.88:774,27,0	1/1:0,6:6:6.02:172,6,0
chr10	15700511	.	C	CG	1063.05	PASS	AB=0.911;AC=38;AF=0.760;AN=50;BaseQRankSum=-1.316;DP=165;FS=2.931;HRun=10;HaplotypeScore=39.1471;InbreedingCoeff=0.1616;MQ=80.04;MQ0=0;MQRankSum=-1.349;QD=7.93;ReadPosRankSum=-1.632;VQSLOD=0.7666;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:5,0:5:0:0,0,0	1/1:1,1:2:3:25,3,0	0/0:15,0:6:11.28:0,11,66	0/0:10,0:5:0.96:0,1,3	./.	1/1:1,1:2:3.01:32,3,0	1/1:5,2:7:8.94:80,9,0	1/1:5,0:5:2.04:6,2,0	1/1:8,2:10:17.11:112,17,0	./.	0/0:2,0:2:2.99:0,3,24	1/1:7,0:7:6.46:25,6,0	1/1:6,0:6:6.01:57,6,0	1/1:8,2:10:8.19:59,8,0	1/1:3,0:3:2.84:14,3,0	1/1:4,0:4:5.84:34,6,0	0/1:12,1:13:2.83:34,0,3	1/1:4,0:4:4.19:21,4,0	1/1:2,6:8:18.01:180,18,0	0/1:4,1:5:15.48:48,0,15	0/1:11,3:14:12.59:70,0,13	1/1:3,0:3:2.94:18,3,0	1/1:1,4:5:9.01:88,9,0	0/1:13,2:15:16.26:218,0,16	0/1:1,0:1:0:0,0,0	1/1:2,1:3:3.01:32,3,0	./.	1/1:1,1:2:3.01:32,3,0
chr10	15700524	.	GCTT	G	149.57	PASS	AB=0.915;AC=7;AF=0.140;AN=50;BaseQRankSum=1.440;DP=144;FS=2.466;HRun=0;HaplotypeScore=38.9810;InbreedingCoeff=-0.0489;MQ=89.33;MQ0=0;MQRankSum=0.310;QD=2.93;ReadPosRankSum=-1.718;VQSLOD=1.2401;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:4:8.39:0,8,93	0/0:1,0:1:3.01:0,3,39	0/1:20,0:10:26.07:26,0,178	0/1:11,0:6:8.12:46,0,8	./.	0/0:1,0:1:3.01:0,3,44	0/1:4,1:5:7.22:90,0,7	0/0:6,0:6:13.95:0,14,135	0/0:9,0:9:23.88:0,24,353	0/0:2,0:2:1.82:0,2,5	0/0:2,0:2:5.96:0,6,44	0/0:6,0:6:11.73:0,12,194	0/0:4,0:4:12.01:0,12,136	0/0:9,0:9:20.99:0,21,287	0/1:3,0:3:41.80:42,0,44	0/1:2,0:2:13.73:14,0,35	0/1:3,5:8:30.17:47,0,30	0/0:1,0:1:3.01:0,3,45	0/0:5,0:5:12.04:0,12,243	0/0:4,0:4:11.97:0,12,160	0/0:9,0:9:20.70:0,21,257	0/0:6,0:6:15.52:0,16,226	0/0:8,0:8:20.79:0,21,258	0/0:15,0:15:42.09:0,42,662	0/0:1,0:1:3.01:0,3,50	./.	./.	0/1:1,0:1:0:0,0,0
chr10	15702313	.	GA	G	5477.64	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=0.688;DP=460;FS=24.803;HRun=1;HaplotypeScore=108.2963;InbreedingCoeff=0.8058;MQ=78.78;MQ0=0;MQRankSum=-5.705;QD=13.17;ReadPosRankSum=1.104;VQSLOD=2.5716;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,2:16:28.62:212,29,0	1/1:8,0:8:18.72:78,19,0	0/0:21,0:23:47.35:0,47,547	0/0:21,0:21:48.56:0,49,613	1/1:33,0:33:8.53:198,9,0	1/1:16,0:16:34.78:179,35,0	1/1:24,0:24:60.91:305,61,0	1/1:19,0:19:48.75:287,49,0	1/1:7,12:19:28.79:302,29,0	1/1:30,0:30:78.67:419,79,0	1/1:9,0:9:8.34:71,8,0	1/1:5,2:7:17.99:156,18,0	1/1:3,12:15:41.94:355,42,0	1/1:8,9:17:44.79:369,45,0	1/1:4,4:8:15.47:134,15,0	1/1:4,8:12:29.91:244,30,0	1/1:19,0:19:37.59:170,38,0	1/1:5,3:8:14.96:129,15,0	1/1:4,6:10:27.47:237,27,0	1/1:3,8:11:20.70:159,21,0	1/1:13,5:18:32.44:238,32,0	1/1:7,4:11:13.07:85,13,0	1/1:6,4:9:2.97:137,3,0	1/1:3,10:13:29.95:251,30,0	1/1:6,4:10:8.44:78,8,0	1/1:30,0:30:55.96:335,56,0	1/1:25,0:24:55.07:215,55,0	1/1:18,0:18:36.39:134,36,0
chr10	15702316	.	GGGGGGA	G	3939	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=-0.988;DP=495;FS=21.744;HRun=0;HaplotypeScore=164.9543;InbreedingCoeff=0.5811;MQ=78.33;MQ0=0;MQRankSum=-11.712;QD=19.69;ReadPosRankSum=1.813;VQSLOD=1.6121;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:5.50:0,5,54	0/0:10,0:10:30.10:0,30,737	0/0:22,0:22:44.71:0,45,1000	0/0:22,0:22:60.09:0,60,1688	0/0:33,0:33:90.29:0,90,2397	0/0:16,0:16:42.14:0,42,1106	0/0:24,0:24:66.23:0,66,1611	0/0:20,0:20:51.17:0,51,1147	1/1:13,6:19:36.12:782,36,0	0/0:30,0:30:85.23:0,85,2066	0/0:10,0:10:24.08:0,24,606	0/1:10,0:10:30.67:31,0,64	1/1:17,0:17:40.08:841,40,0	1/1:15,0:15:24.91:511,25,0	0/1:15,0:15:27.39:27,0,108	0/1:18,0:18:18.39:18,0,208	0/0:18,0:18:48.13:0,48,1192	0/1:13,0:13:27.11:27,0,144	1/1:9,1:10:17.43:333,17,0	1/1:13,0:13:21.02:434,21,0	1/1:18,1:19:15.51:234,16,0	1/1:16,0:16:0.33:1,0,0	1/1:11,0:10:13.32:224,13,0	1/1:12,1:13:23.64:463,24,0	0/1:11,0:11:13.84:14,0,32	0/0:31,0:31:84.28:0,84,2070	0/0:24,0:23:66.23:0,66,1785	0/0:18,0:18:51.18:0,51,1409
chr10	15702317	.	GGGGGA	G	3107.60	PASS	AB=0.988;AC=25;AF=0.446;AN=56;BaseQRankSum=6.342;DP=504;FS=17.527;HRun=0;HaplotypeScore=159.5088;InbreedingCoeff=0.7023;MQ=77.36;MQ0=0;MQRankSum=-11.086;QD=13.63;ReadPosRankSum=1.112;VQSLOD=1.9283;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:15,1:16:1.14:30,0,1	0/0:10,0:10:30.10:0,30,641	0/0:21,0:22:24.40:0,24,898	0/0:21,0:22:60.01:0,60,1501	0/0:34,0:34:96.30:0,96,2190	0/0:15,0:15:42.14:0,42,965	0/0:26,0:26:72.24:0,72,1489	0/0:20,0:20:51.16:0,51,968	1/1:8,12:20:36.11:518,36,0	0/0:30,0:30:84.75:0,85,1782	0/0:8,0:8:24.08:0,24,539	0/1:9,0:9:0.42:129,0,0	1/1:6,12:18:39.52:565,40,0	1/1:10,9:19:25.06:344,25,0	1/1:15,0:15:13.29:119,13,0	0/1:17,0:17:70.26:137,0,70	0/0:17,0:17:48.13:0,48,1054	0/1:13,0:13:15.21:123,0,15	1/1:7,4:11:20.48:299,20,0	1/1:7,8:15:24.02:301,24,0	1/1:18,3:21:18.25:176,18,0	1/1:15,0:15:1.36:2,1,0	1/1:6,4:9:13.41:157,13,0	1/1:8,8:16:22.51:362,23,0	0/1:13,0:13:2.13:53,0,2	0/0:30,0:30:84.75:0,85,1804	0/0:25,0:24:69.17:0,69,1612	0/0:17,0:17:51.18:0,51,1244
chr10	15702318	.	GGGGA	G	3635.30	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=2.675;DP=503;FS=9.739;HRun=0;HaplotypeScore=148.7060;InbreedingCoeff=0.9481;MQ=77.39;MQ0=0;MQRankSum=-10.075;QD=15.94;ReadPosRankSum=-2.405;VQSLOD=2.4823;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:16:11.59:94,12,0	0/0:11,0:11:33.04:0,33,556	0/0:21,0:21:45.09:0,45,760	0/0:23,0:23:58.49:0,58,1237	0/0:34,0:34:96.20:0,96,1827	0/0:15,0:15:45.12:0,45,832	0/0:25,0:25:72.09:0,72,1222	0/0:21,0:21:53.91:0,54,810	1/1:19,0:19:35.78:464,36,0	0/0:29,0:29:84.14:0,84,1475	0/0:8,0:8:24.08:0,24,450	1/1:7,2:9:17.46:145,17,0	1/1:17,0:17:44.26:539,44,0	1/1:20,0:20:36.51:408,37,0	1/1:13,1:14:12.35:163,12,0	1/1:16,1:17:20.21:319,20,0	0/0:17,0:17:48.13:0,48,898	1/1:10,2:12:8.79:129,9,0	1/1:10,1:11:23.77:277,24,0	1/1:15,0:15:24.02:271,24,0	1/1:21,0:21:23.57:203,24,0	1/1:14,1:15:1.72:4,2,0	1/1:9,0:8:14.18:143,14,0	1/1:18,1:19:33.52:393,34,0	1/1:12,2:14:10.26:83,10,0	0/0:30,0:30:84.15:0,84,1494	0/0:24,0:23:69.12:0,69,1365	0/0:17,0:17:51.18:0,51,1052
chr10	15702319	.	GGGA	G	3680.70	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=1.465;DP=500;FS=4.150;HRun=0;HaplotypeScore=138.2218;InbreedingCoeff=0.9615;MQ=77.57;MQ0=0;MQRankSum=-9.245;QD=16.07;ReadPosRankSum=-4.582;VQSLOD=2.5733;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:14,1:15:13.29:112,13,0	0/0:11,0:11:28.32:0,28,375	0/0:21,0:21:41.46:0,41,636	0/0:23,0:23:25.97:0,26,981	0/0:33,0:33:92.63:0,93,1308	0/0:15,0:15:44.15:0,44,577	0/0:24,0:24:66.60:0,67,834	0/0:20,0:20:52.19:0,52,604	1/1:19,0:19:39.05:419,39,0	0/0:29,0:29:80.27:0,80,1063	0/0:8,0:8:23.74:0,24,316	1/1:10,0:10:21.07:170,21,0	1/1:16,0:16:48.11:519,48,0	1/1:20,0:20:44.96:436,45,0	1/1:11,3:14:13.88:127,14,0	1/1:11,7:18:28.36:265,28,0	0/0:17,0:17:48.11:0,48,643	1/1:11,1:12:14.81:139,15,0	1/1:12,0:12:29.96:292,30,0	1/1:16,0:16:29.92:273,30,0	1/1:19,0:19:27.26:254,27,0	1/1:13,3:16:2.03:5,2,0	1/1:9,0:8:20.02:176,20,0	1/1:19,0:19:41.77:410,42,0	1/1:12,2:14:11.25:84,11,0	0/0:29,0:29:81.77:0,82,1104	0/0:24,0:23:69.08:0,69,954	0/0:17,0:17:51.16:0,51,731
chr10	15702321	.	GA	G	3510.05	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=0.995;DP=486;FS=0.368;HRun=1;HaplotypeScore=118.4237;InbreedingCoeff=0.9726;MQ=78.64;MQ0=0;MQRankSum=-8.072;QD=16.56;ReadPosRankSum=-5.130;VQSLOD=2.0729;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,0:12:23.19:179,23,0	0/0:12,0:12:36:0,36,377	0/0:17,3:20:17.44:0,17,341	0/0:24,0:24:51.53:0,52,656	0/0:33,0:33:96.21:0,96,1115	0/0:16,0:16:48.10:0,48,543	0/0:24,0:24:72.13:0,72,796	0/0:21,0:21:63.09:0,63,686	1/1:19,0:19:38.51:258,39,0	0/0:29,0:29:84.19:0,84,980	0/0:9,0:9:27.06:0,27,313	1/1:10,0:10:26.90:212,27,0	1/1:17,0:17:50.38:358,50,0	1/1:18,0:18:50.68:384,51,0	1/1:11,0:11:26.93:222,27,0	1/1:18,0:18:47.86:387,48,0	0/0:17,0:17:48.09:0,48,553	1/1:9,1:10:29.95:251,30,0	1/1:6,4:10:29.77:212,30,0	1/1:9,6:15:29.60:198,30,0	1/1:13,3:16:29.31:245,29,0	1/1:4,11:15:2.29:6,2,0	1/1:9,0:8:20.86:154,21,0	1/1:18,0:18:41.66:304,42,0	1/1:14,0:14:17.29:140,17,0	0/0:29,0:29:84.18:0,84,981	0/0:23,0:22:69.17:0,69,803	0/0:17,0:17:51.14:0,51,615
chr10	15704127	.	A	AT	10636.10	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-7.688;DP=536;FS=7.915;HRun=7;HaplotypeScore=54.2624;InbreedingCoeff=0.9979;MQ=67.18;MQ0=1;MQRankSum=-1.150;QD=28.67;ReadPosRankSum=-0.546;VQSLOD=5.0731;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:81.13:0,81,782	1/1:0,15:15:39.11:463,39,0	0/0:10,0:8:20.71:0,21,166	0/0:11,0:10:23.87:0,24,231	1/1:5,21:26:63.12:736,63,0	1/1:1,24:25:69.21:834,69,0	1/1:1,17:17:36.11:435,36,0	1/1:2,32:34:93.14:1056,93,0	1/1:3,10:13:21.06:254,21,0	1/1:3,13:16:36.09:421,36,0	1/1:4,11:15:32.95:361,33,0	0/0:15,0:15:39.06:0,39,377	1/1:2,17:19:45.14:544,45,0	1/1:2,12:14:33.10:397,33,0	0/0:15,0:15:42.04:0,42,396	0/0:18,0:18:51.06:0,51,482	1/1:2,18:20:54.16:645,54,0	0/0:28,0:28:81.12:0,81,776	1/1:6,18:24:28.20:622,28,0	1/1:1,13:14:42.07:483,42,0	1/1:3,11:14:30.09:362,30,0	0/0:19,0:19:54.09:0,54,521	1/1:1,20:21:48.08:561,48,0	1/1:0,14:14:36.11:435,36,0	0/0:19,0:19:57.09:0,57,550	1/1:4,30:34:93.24:1106,93,0	1/1:2,19:21:36.03:414,36,0	1/1:0,14:14:42.13:507,42,0
chr10	15705094	.	GC	G	5579.57	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=17.204;DP=691;FS=8.146;HRun=1;HaplotypeScore=104.6232;InbreedingCoeff=0.9991;MQ=75.95;MQ0=0;MQRankSum=-9.775;QD=34.02;ReadPosRankSum=-0.032;VQSLOD=3.7806;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,36:36:84.26:1112,84,0	0/0:11,0:11:30.10:0,30,480	0/0:24,0:24:72.24:0,72,1135	0/0:24,0:24:69.22:0,69,1054	0/0:23,0:23:69.24:0,69,1103	0/0:20,0:20:60.19:0,60,934	0/0:27,0:27:81.28:0,81,1287	0/0:30,0:30:90.31:0,90,1439	0/0:26,0:26:75.26:0,75,1196	0/0:36,0:36:99:0,105,1678	0/0:13,0:13:36.12:0,36,573	1/1:1,29:30:87.28:1186,87,0	0/0:26,0:26:78.27:0,78,1245	0/0:33,0:33:93.32:0,93,1486	1/1:4,21:25:69.21:928,69,0	1/1:4,20:24:21.32:838,21,0	0/0:33,0:33:99:0,99,1583	1/1:3,12:15:36.10:494,36,0	0/0:16,0:16:48.16:0,48,764	0/0:24,0:24:72.22:0,72,1104	0/0:52,0:52:99:0,151,2395	1/1:0,20:20:35.63:494,36,0	0/0:17,0:17:51.16:0,51,791	0/0:35,0:35:99:0,105,1679	1/1:0,14:14:39.12:527,39,0	0/0:25,0:25:72.25:0,72,1149	0/0:14,0:14:42.13:0,42,642	0/0:18,0:18:54.18:0,54,863
chr10	15705136	.	T	TGAGA	9858.01	PASS	AB=0.531;AC=13;AF=0.232;AN=56;BaseQRankSum=5.777;DP=674;FS=2.639;HRun=0;HaplotypeScore=125.6704;InbreedingCoeff=0.9047;MQ=79.41;MQ0=0;MQRankSum=-13.097;QD=62.00;ReadPosRankSum=3.197;VQSLOD=7.0852;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,38:45:93.32:2540,93,0	0/0:13,0:13:39.13:0,39,756	0/0:32,0:30:84.29:0,84,1566	0/0:30,0:30:90.26:0,90,1608	0/0:18,0:18:48.16:0,48,919	0/0:18,0:18:54.19:0,54,1023	0/0:34,0:34:96.33:0,96,1818	0/0:27,0:27:81.26:0,81,1474	0/0:34,0:34:99:0,99,1828	0/0:25,0:25:66.23:0,66,1259	0/0:15,0:15:39.13:0,39,756	1/1:2,24:28:66.23:1760,66,0	0/0:19,0:19:54.18:0,54,1015	0/0:29,0:29:84.27:0,84,1585	1/1:3,19:22:57.20:1545,57,0	0/1:2,15:17:13.01:1103,0,13	0/0:30,0:30:90.28:0,90,1672	1/1:1,13:14:33.11:903,33,0	0/0:15,0:15:39.13:0,39,756	0/0:22,0:22:66.20:0,66,1213	0/0:50,0:50:99:0,147,2772	1/1:3,11:15:32.75:860,33,0	0/0:18,0:18:54.19:0,54,1047	0/0:31,0:31:87.28:0,87,1651	1/1:2,16:18:42.14:1148,42,0	0/0:20,0:20:57.18:0,57,1066	0/0:21,0:21:63.22:0,63,1221	0/0:14,0:14:39.13:0,39,756
chr10	15707495	.	G	GATTT	3884.85	PASS	AC=34;AF=0.773;AN=44;BaseQRankSum=-1.341;DP=302;FS=4.561;HRun=0;HaplotypeScore=51.8314;InbreedingCoeff=0.5728;MQ=59.65;MQ0=3;MQRankSum=-1.173;QD=16.46;ReadPosRankSum=-0.513;VQSLOD=2.7766;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,5:14:12.04:283,12,0	1/1:3,0:3:3.01:70,3,0	./.	./.	1/1:10,0:12:6.02:101,6,0	1/1:8,0:14:21.07:360,21,0	1/1:5,0:5:6.02:125,6,0	1/1:44,0:38:27.08:427,27,0	./.	1/1:7,0:7:9.02:104,9,0	1/1:7,0:7:3.01:52,3,0	1/1:5,2:8:6.02:142,6,0	0/0:5,0:5:6.02:0,6,93	0/0:9,0:9:6.02:0,6,93	1/1:4,5:9:15.05:321,15,0	1/1:4,1:5:3.01:71,3,0	1/1:17,0:17:6.02:104,6,0	1/1:11,17:28:40.83:1119,41,0	0/0:12,0:11:6.02:0,6,92	0/0:6,0:6:6.02:0,6,93	0/0:8,0:8:9.03:0,9,140	./.	./.	./.	1/1:5,4:10:12.04:283,12,0	1/1:12,0:16:12.04:219,12,0	1/1:10,0:13:3.01:52,3,0	1/1:19,0:24:3.01:52,3,0
chr10	15708405	.	AACTC	A	1290.02	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=1.230;DP=298;FS=12.112;HRun=0;HaplotypeScore=80.2855;InbreedingCoeff=0.8562;MQ=74.18;MQ0=1;MQRankSum=-7.470;QD=27.45;ReadPosRankSum=-2.428;VQSLOD=2.1192;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,9:12:22.43:408,22,0	0/0:5,0:5:15.05:0,15,268	0/0:18,0:7:16.87:0,17,384	0/0:30,1:23:31.16:0,31,744	0/0:12,0:12:26.56:0,27,473	0/0:5,0:5:15.05:0,15,266	0/0:12,0:12:10.58:0,11,469	0/0:10,0:10:24.07:0,24,368	0/0:12,0:12:36.12:0,36,983	0/0:16,0:16:48.16:0,48,815	0/0:7,0:7:18.06:0,18,322	1/1:1,4:5:12.04:228,12,0	0/0:9,0:9:24.07:0,24,559	0/0:17,0:17:51.18:0,51,1326	1/1:4,4:8:18.16:284,18,0	1/1:0,4:4:12.04:232,12,0	0/0:7,0:7:21.07:0,21,364	1/1:0,3:3:6.02:116,6,0	0/0:7,0:7:21.07:0,21,566	0/0:15,0:15:39.13:0,39,1066	0/0:19,0:19:54.19:0,54,1466	1/1:2,0:2:5.81:65,6,0	0/0:10,0:10:24.08:0,24,624	0/0:14,0:14:42.14:0,42,1116	1/1:1,4:5:8.99:136,9,0	0/1:8,0:8:2.86:3,0,331	0/0:12,0:12:36.12:0,36,630	0/0:12,0:12:36.12:0,36,632
chr10	15708680	.	A	AT	6660.93	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=13.786;DP=658;FS=0.000;HRun=7;HaplotypeScore=81.2795;InbreedingCoeff=0.9985;MQ=88.23;MQ0=0;MQRankSum=-1.503;QD=29.34;ReadPosRankSum=0.017;VQSLOD=5.0192;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,111,1051	1/1:1,7:8:21.06:254,21,0	0/0:21,0:21:39.11:0,39,445	0/0:27,0:27:36.83:0,37,526	1/1:1,18:19:48.15:580,48,0	1/1:1,20:21:60.18:725,60,0	1/1:7,21:28:54.17:652,54,0	1/1:6,22:28:66.20:797,66,0	0/0:26,0:26:72.06:0,72,685	1/1:2,17:19:51.15:606,51,0	1/1:0,10:10:27.08:326,27,0	0/0:36,0:36:99:0,105,1001	0/0:24,0:24:72.03:0,72,669	0/0:26,0:26:69.10:0,69,665	0/0:34,0:34:87.11:0,87,833	0/0:30,0:30:78.09:0,78,742	1/1:5,34:40:99:1173,99,0	0/0:9,0:9:21.03:0,21,203	0/0:21,0:21:57.09:0,57,550	0/0:19,0:19:45.02:0,45,420	0/0:35,0:35:81.05:0,81,768	0/0:16,0:16:45.06:0,45,433	0/0:24,0:24:60.09:0,60,579	0/0:28,0:28:75.08:0,75,711	0/0:14,0:14:36.06:0,36,348	1/1:3,14:17:42.13:506,42,0	1/1:2,21:23:60.18:715,60,0	1/1:2,12:14:27.08:326,27,0
chr10	15711215	.	C	CT	8842.11	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-9.448;DP=489;FS=0.447;HRun=9;HaplotypeScore=45.4105;InbreedingCoeff=0.9547;MQ=68.28;MQ0=4;MQRankSum=-1.557;QD=25.12;ReadPosRankSum=1.775;VQSLOD=5.3722;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,18:22:48.13:531,48,0	1/1:1,5:6:18.05:196,18,0	0/0:7,0:6:5.61:0,6,48	0/0:10,0:9:17.17:0,17,160	1/1:4,24:28:69.08:734,69,0	1/1:3,23:26:66.14:717,66,0	1/1:1,8:9:21.06:232,21,0	1/1:13,24:34:75.18:818,75,0	0/0:12,0:12:26.99:0,27,234	1/1:8,11:19:36.04:370,36,0	1/1:5,16:21:48.13:531,48,0	1/1:2,12:14:36.09:391,36,0	0/0:13,0:13:23.98:0,24,208	0/0:18,0:18:47.96:0,48,409	1/1:1,16:17:48.13:531,48,0	1/1:3,14:17:42.07:451,42,0	1/1:1,14:15:33.09:365,33,0	1/1:4,14:18:4.03:273,4,0	0/0:16,0:15:32.98:0,33,286	0/0:24,0:24:62.98:0,63,547	0/0:13,0:13:35.99:0,36,313	1/1:0,6:6:18.05:199,18,0	0/0:11,0:11:17.81:0,18,156	0/0:13,0:13:26.98:0,27,234	1/1:2,23:25:60.16:664,60,0	1/1:3,18:21:57.12:612,57,0	1/1:4,26:30:69.19:763,69,0	1/1:6,15:21:42.11:465,42,0
chr10	15711601	.	G	GC	2651.49	PASS	AB=0.939;AC=16;AF=0.286;AN=56;BaseQRankSum=5.294;DP=664;FS=15.790;HRun=3;HaplotypeScore=64.8838;InbreedingCoeff=0.8184;MQ=58.35;MQ0=45;MQRankSum=-9.483;QD=12.87;ReadPosRankSum=-0.269;VQSLOD=1.1222;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,20:22:39.09:508,39,0	0/0:10,0:10:15.04:0,15,177	0/1:31,1:15:51.52:52,0,238	0/1:36,4:19:99:145,0,335	0/0:17,0:17:30.02:0,30,342	0/0:21,0:21:51.16:0,51,612	0/0:31,0:26:63.13:0,63,713	0/0:26,0:20:51.16:0,51,612	0/0:27,1:23:54.17:0,54,648	0/0:14,0:12:33.10:0,33,396	0/0:14,0:14:27.07:0,27,312	1/1:6,18:16:30.10:419,30,0	0/0:20,0:16:41.93:0,42,470	0/0:23,0:22:60.10:0,60,685	1/1:6,16:11:21.07:293,21,0	1/1:2,11:12:27.05:355,27,0	0/0:30,1:28:54.16:0,54,647	1/1:5,12:13:21.07:293,21,0	0/0:15,0:9:27.08:0,27,324	0/0:11,0:10:27.08:0,27,324	0/0:87,0:70:99:0,132,1559	1/1:2,13:14:26.98:326,27,0	0/0:13,0:11:24.07:0,24,287	0/0:41,1:39:69.19:0,69,815	1/1:1,14:15:33.11:461,33,0	0/0:18,0:17:42.11:0,42,486	0/0:23,0:22:51.09:0,51,594	0/0:14,0:12:18.05:0,18,216
chr10	15714623	.	TA	T	7377.46	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-1.983;DP=552;FS=2.143;HRun=11;HaplotypeScore=68.4378;InbreedingCoeff=0.9938;MQ=70.98;MQ0=0;MQRankSum=-1.407;QD=18.92;ReadPosRankSum=2.638;VQSLOD=6.0313;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:66.06:0,66,671	1/1:0,8:8:23.97:197,24,0	0/0:16,1:15:26.77:0,27,245	0/0:10,0:10:17.81:0,18,158	1/1:3,23:27:58.82:459,59,0	1/1:2,16:18:44.95:369,45,0	1/1:8,6:15:28.01:203,28,0	1/1:7,30:37:60.78:690,61,0	1/1:2,17:19:21.96:387,22,0	1/1:6,22:28:62.26:485,62,0	1/1:2,12:14:32.96:271,33,0	0/0:20,2:22:13.86:0,14,537	1/1:1,18:21:55.01:430,55,0	1/1:3,14:17:32.95:271,33,0	0/0:21,0:21:54.08:0,54,556	0/0:19,0:19:57.06:0,57,572	1/1:0,13:13:32.96:270,33,0	0/0:13,0:13:39.04:0,39,395	1/1:3,14:17:41.93:342,42,0	1/1:0,32:32:89.88:739,90,0	1/1:1,16:17:44.93:369,45,0	0/0:10,0:10:29.24:0,29,266	1/1:3,10:13:26.90:216,27,0	1/1:3,12:15:29.96:246,30,0	0/0:25,0:25:72.03:0,72,716	1/1:6,24:30:68.74:556,69,0	1/1:7,22:29:62.78:508,63,0	1/1:4,16:20:44.91:369,45,0
chr10	15715305	.	A	ATGCG	8824.59	PASS	AB=1.000;AC=36;AF=0.643;AN=56;BaseQRankSum=0.099;DP=706;FS=10.412;HRun=0;HaplotypeScore=131.8301;InbreedingCoeff=-0.2044;MQ=60.06;MQ0=6;MQRankSum=0.956;QD=13.43;ReadPosRankSum=-3.274;VQSLOD=3.3426;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:35,0:35:11.76:12,0,92	1/1:10,0:10:17.95:207,18,0	0/0:24,0:10:2.94:0,3,20	0/1:25,0:7:10.02:10,0,37	1/1:7,10:17:12.51:291,13,0	1/1:3,12:16:15.02:312,15,0	1/1:29,11:40:39.06:840,39,0	0/1:30,0:29:4.32:117,0,4	0/1:16,0:16:10.15:147,0,10	1/1:11,6:17:17.98:332,18,0	1/1:13,2:15:14.98:248,15,0	0/0:25,0:24:14.08:0,14,138	0/1:31,0:31:61.83:332,0,62	0/1:32,0:32:56.86:452,0,57	0/1:22,0:22:68.85:219,0,69	0/1:19,0:19:51.45:320,0,51	1/1:10,22:34:48.16:1160,48,0	0/1:28,0:28:86.01:542,0,86	0/1:18,0:17:8.57:84,0,9	0/1:21,0:21:95.67:169,0,96	0/1:95,0:95:99:1157,0,272	0/1:7,0:7:0.80:1,0,22	0/1:9,0:9:49.85:176,0,50	0/1:28,0:27:49.48:467,0,49	0/1:30,0:30:53.02:53,0,115	1/1:15,7:23:23.91:321,24,0	1/1:9,12:21:23.91:421,24,0	1/1:6,11:18:18.06:435,18,0
chr10	15715326	.	TGC	T	486.83	PASS	AB=0.898;AC=5;AF=0.089;AN=56;BaseQRankSum=-2.739;DP=691;FS=7.378;HRun=0;HaplotypeScore=125.9975;InbreedingCoeff=-0.1009;MQ=58.96;MQ0=11;MQRankSum=1.027;QD=3.99;ReadPosRankSum=-3.221;VQSLOD=1.1705;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:25,13:36:99:464,0,374	0/0:8,0:8:17.96:0,18,217	0/0:26,0:12:25.36:0,25,227	0/0:25,0:8:22.50:0,22,194	0/0:14,0:14:23.24:0,23,264	0/0:19,0:19:27.06:0,27,335	0/0:39,0:39:80.72:0,81,913	0/0:21,0:20:35.29:0,35,549	0/0:13,0:13:7.87:0,8,221	0/0:16,0:16:32.99:0,33,369	0/0:12,0:12:23.66:0,24,274	0/0:22,1:21:18.01:0,18,288	0/0:28,0:28:54.76:0,55,497	0/0:26,0:26:44.51:0,45,434	0/0:22,0:22:32.60:0,33,340	0/1:16,1:17:78.85:79,0,324	0/0:30,0:30:66.12:0,66,777	0/1:41,2:43:12.67:13,0,603	0/0:16,1:15:26.47:0,26,277	0/0:17,0:17:34.63:0,35,325	0/0:93,3:94:47.60:0,48,1213	0/1:10,1:10:28.61:29,0,117	0/1:12,1:13:18.27:18,0,178	0/0:29,2:31:26.89:0,27,484	0/0:30,1:29:62.98:0,63,627	0/0:18,0:18:47.73:0,48,640	0/0:22,0:22:46.17:0,46,535	0/0:15,0:15:27.09:0,27,351
chr10	15715328	.	C	CGTGT	10481.64	PASS	AB=0.903;AC=40;AF=0.714;AN=56;BaseQRankSum=-0.452;DP=704;FS=18.582;HRun=0;HaplotypeScore=113.8433;InbreedingCoeff=-0.2147;MQ=59.35;MQ0=11;MQRankSum=2.087;QD=15.30;ReadPosRankSum=9.531;VQSLOD=2.4332;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:36:52.69:290,53,0	1/1:8,0:8:6.45:71,6,0	0/1:26,0:12:15:15,0,109	0/1:27,0:10:14.86:15,0,76	0/1:13,0:13:25.45:178,0,25	0/1:18,0:18:67.28:187,0,67	0/1:40,0:40:99:489,0,189	0/0:19,0:18:17.47:0,17,177	1/1:7,2:15:23.51:320,24,0	0/1:15,0:15:99:167,0,112	0/1:12,0:12:8.35:134,0,8	1/1:8,0:24:16.47:75,16,0	1/1:10,15:27:23.82:527,24,0	1/1:5,19:25:29.90:739,30,0	0/1:5,18:25:4.30:361,0,4	1/1:10,5:17:38.16:633,38,0	0/1:30,0:30:38.74:777,0,39	1/1:10,28:44:51.84:953,52,0	1/1:6,9:15:29.65:320,30,0	1/1:9,8:17:12.04:296,12,0	1/1:32,61:99:68.25:1939,68,0	0/1:4,0:12:23.41:23,0,31	1/1:6,8:15:14.34:304,14,0	1/1:8,22:34:41.08:788,41,0	0/1:6,1:29:49.64:210,0,50	0/1:15,1:16:99:177,0,135	0/1:20,0:20:88.27:222,0,88	0/1:15,0:15:46.88:273,0,47
chr10	15715330	.	T	TGC	2831.90	PASS	AB=0.966;AC=24;AF=0.429;AN=56;BaseQRankSum=10.268;DP=690;FS=4.482;HRun=0;HaplotypeScore=116.8188;InbreedingCoeff=-0.7186;MQ=61.11;MQ0=11;MQRankSum=3.362;QD=4.71;ReadPosRankSum=13.883;VQSLOD=-0.1505;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:37,0:35:57.99:529,0,58	0/1:8,0:8:32.56:70,0,33	0/0:27,0:14:26.74:0,27,319	0/0:30,0:13:14.06:0,14,356	0/1:11,0:11:70.41:79,0,70	0/1:17,1:18:99:127,0,149	0/1:25,15:40:99:306,0,412	0/1:20,0:19:51.72:52,0,339	0/1:14,0:14:41.58:42,0,87	0/1:14,0:14:90.74:91,0,187	0/1:4,6:11:25.05:158,0,25	0/1:26,0:24:99:113,0,100	0/1:25,0:25:29.21:29,0,71	0/1:25,0:25:0.83:1,0,80	0/1:25,0:25:9.50:10,0,120	0/1:17,0:17:64.80:65,0,66	0/1:28,0:28:99:326,0,116	0/1:43,0:43:99:106,0,118	0/0:16,0:14:14.29:0,14,312	0/0:16,0:16:14.56:0,15,142	0/1:102,0:100:55.74:56,0,338	0/1:12,0:11:54.80:55,0,56	0/1:14,0:14:8.16:8,0,77	0/1:33,0:33:61.84:89,0,62	0/1:30,0:28:80.30:289,0,80	0/1:16,0:16:58.38:58,0,330	0/1:17,2:19:99:211,0,183	0/1:13,0:13:74.37:118,0,74
chr10	15716732	.	GAATGAATGAATGA	G	6904.54	PASS	AB=0.944;AC=17;AF=0.304;AN=56;BaseQRankSum=7.196;DP=526;FS=4.672;HRun=0;HaplotypeScore=229.9330;InbreedingCoeff=0.8699;MQ=66.59;MQ0=2;MQRankSum=-10.200;QD=49.67;ReadPosRankSum=2.798;VQSLOD=4.2251;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:62.97:0,63,2272	0/0:9,0:9:24.08:0,24,987	0/0:17,0:15:14.23:0,14,240	0/0:9,0:9:12.02:0,12,293	0/0:22,0:22:60.02:0,60,2327	0/0:31,0:30:75:0,75,3345	0/0:18,0:18:39.13:0,39,1612	0/0:31,0:31:56.91:0,57,2148	1/1:2,13:15:27.09:1027,27,0	0/0:14,0:14:40.02:0,40,1667	0/0:11,0:11:21.07:0,21,928	0/1:16,1:17:74.93:75,0,1203	1/1:6,9:15:21.07:798,21,0	1/1:1,12:13:21.07:799,21,0	0/0:11,0:11:21.54:0,22,818	0/0:18,0:18:51.17:0,51,2146	0/0:34,0:34:78.24:0,78,3081	0/0:29,0:29:69.24:0,69,3083	1/1:6,13:18:39.09:1204,39,0	1/1:4,14:18:39.13:1406,39,0	1/1:2,7:9:3.01:114,3,0	0/0:28,0:28:69.17:0,69,2751	1/1:2,15:17:35.78:1103,36,0	1/1:6,10:16:12.04:379,12,0	0/0:19,0:19:48.16:0,48,2095	0/0:26,0:26:66.23:0,66,2874	0/0:14,0:14:38.85:0,39,1491	0/0:18,0:18:50.39:0,50,2220
chr10	15716740	.	GAATGA	G	4948.75	PASS	AB=0.986;AC=35;AF=0.625;AN=56;BaseQRankSum=-2.932;DP=504;FS=0.765;HRun=0;HaplotypeScore=151.2528;InbreedingCoeff=-0.4641;MQ=60.76;MQ0=2;MQRankSum=-3.699;QD=10.18;ReadPosRankSum=-8.567;VQSLOD=1.3846;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:25,2:27:99:319,0,358	0/1:9,0:9:13.14:13,0,206	0/1:15,0:13:13.11:170,0,13	0/1:10,0:10:15.81:168,0,16	0/1:21,1:22:99:184,0,440	0/1:30,0:29:33.16:33,0,710	0/1:16,0:16:69.73:70,0,312	0/1:25,0:25:99:228,0,365	1/1:15,0:15:27.08:333,27,0	0/1:16,0:16:99:139,0,298	0/1:14,0:14:99:119,0,178	0/1:17,0:17:99:183,0,188	1/1:14,0:14:21.07:259,21,0	1/1:13,0:13:21.07:259,21,0	0/1:12,0:12:99:155,0,140	0/1:18,0:18:60.38:60,0,435	0/1:27,2:29:99:223,0,524	0/1:28,0:28:70.53:71,0,655	1/1:17,0:16:39:434,39,0	1/1:16,0:16:39.12:481,39,0	1/1:7,0:7:3.01:37,3,0	0/1:26,1:27:99:174,0,536	1/1:16,0:16:34.82:410,35,0	1/1:14,0:14:12.04:148,12,0	0/1:18,1:19:99:119,0,411	0/1:25,0:25:53.12:53,0,580	0/1:15,0:15:99:106,0,302	0/0:18,0:18:13.19:0,13,485
chr10	15716881	.	C	CTG	4699.01	PASS	AB=1.000;AC=36;AF=0.667;AN=54;BaseQRankSum=0.129;DP=610;FS=0.000;HRun=0;HaplotypeScore=147.1912;InbreedingCoeff=0.7999;MQ=58.92;MQ0=6;MQRankSum=-1.238;QD=11.19;ReadPosRankSum=1.203;VQSLOD=4.5967;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:31:36.09:0,36,396	1/1:12,0:12:15.05:211,15,0	0/0:51,0:30:18.28:0,18,305	0/1:51,0:25:2.65:3,0,233	1/1:18,0:18:14.99:175,15,0	1/1:18,0:18:2.96:195,3,0	1/1:20,0:19:26:310,26,0	1/1:30,0:30:40:368,40,0	1/1:12,0:12:12.04:164,12,0	1/1:16,0:16:10.64:254,11,0	1/1:23,0:23:21.40:160,21,0	0/0:18,0:18:36.05:0,36,379	1/1:11,0:11:15:169,15,0	1/1:13,0:13:11.89:98,12,0	0/0:18,0:18:23.94:0,24,215	0/0:11,0:10:29.92:0,30,324	1/1:40,1:41:57.03:581,57,0	0/0:19,0:19:27.12:0,27,335	1/1:24,0:22:34.53:294,35,0	1/1:10,0:10:9.03:117,9,0	1/1:40,2:42:7.50:345,7,0	0/0:11,0:11:9:0,9,82	./.	1/1:32,1:33:57.06:674,57,0	0/0:16,0:16:29.86:0,30,300	0/1:20,0:19:2.78:277,0,3	1/1:5,11:17:9.01:104,9,0	1/1:9,0:9:20.46:199,20,0
chr10	15716900	.	TGAGAGA	T	2529.01	PASS	AB=0.989;AC=26;AF=0.464;AN=56;BaseQRankSum=-0.775;DP=584;FS=1.429;HRun=0;HaplotypeScore=186.8980;InbreedingCoeff=-0.1658;MQ=48.14;MQ0=15;MQRankSum=0.383;QD=5.83;ReadPosRankSum=-0.306;VQSLOD=2.4424;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,1:31:35.23:0,35,515	1/1:8,0:8:10.73:93,11,0	0/0:42,0:16:35.16:0,35,720	0/1:53,1:20:42.96:43,0,763	1/1:18,0:18:2.18:78,2,0	0/1:21,0:21:16.39:162,0,16	1/1:24,0:23:15.02:153,15,0	0/1:23,1:22:77.72:372,0,78	1/1:9,0:9:7.22:61,7,0	0/1:15,1:15:59.99:60,0,87	0/1:23,0:23:81.78:163,0,82	0/0:16,0:17:6.05:0,6,452	0/1:14,0:14:10.99:73,0,11	0/1:12,0:12:29.98:30,0,55	0/0:9,2:13:24.05:0,24,434	0/0:12,2:13:29.86:0,30,444	0/1:39,0:39:99:313,0,115	0/1:16,1:16:61.10:61,0,593	0/1:17,0:14:41.08:178,0,41	0/1:10,0:10:11.15:59,0,11	0/1:44,0:43:99:182,0,188	0/0:12,1:12:8.34:0,8,88	0/1:12,0:12:0:0,0,0	0/1:36,0:37:76.96:266,0,77	0/0:16,2:18:21.71:0,22,425	0/1:14,0:13:12.32:164,0,12	1/1:14,0:14:7.79:61,8,0	0/1:7,0:7:17.09:127,0,17
chr10	15716904	.	AGAGT	A	1138.46	PASS	AB=0.988;AC=23;AF=0.426;AN=54;BaseQRankSum=-1.403;DP=564;FS=6.130;HRun=0;HaplotypeScore=175.8167;InbreedingCoeff=-0.5681;MQ=47.94;MQ0=16;MQRankSum=1.736;QD=2.49;ReadPosRankSum=1.187;VQSLOD=2.2376;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:32,0:30:85.19:85,0,94	0/0:7,0:7:11.09:0,11,41	0/0:37,0:13:29.31:0,29,242	0/1:51,0:19:8.46:8,0,244	0/0:18,1:19:11.81:0,12,62	0/1:17,2:19:48.51:89,0,49	0/0:17,5:22:20.40:0,20,90	0/1:21,0:19:48.05:48,0,91	0/0:10,0:10:8.77:0,9,31	0/1:13,1:13:47.81:88,0,48	0/1:22,0:22:7.76:176,0,8	0/1:18,0:18:80.66:138,0,81	0/1:13,0:13:29.03:52,0,29	0/1:13,0:13:12.39:12,0,71	0/1:15,0:15:33.43:33,0,99	0/1:13,0:13:61.24:61,0,122	0/1:38,0:38:95.47:95,0,161	0/1:18,0:17:24.75:25,0,307	0/1:19,0:15:43.05:43,0,84	0/1:10,0:10:9.18:14,0,9	0/1:44,0:43:29.97:30,0,150	1/1:11,0:11:3:25,3,0	./.	0/1:35,0:35:25.27:25,0,104	0/1:18,0:18:87.81:88,0,100	0/1:13,0:13:55:84,0,55	0/1:12,0:12:3.06:55,0,3	0/1:5,0:5:14.50:14,0,36
chr10	15716906	.	AGT	A	1239.69	PASS	AB=0.868;AC=20;AF=0.370;AN=54;BaseQRankSum=-0.126;DP=570;FS=0.000;HRun=0;HaplotypeScore=164.0748;InbreedingCoeff=-0.0725;MQ=47.51;MQ0=18;MQRankSum=2.033;QD=3.85;ReadPosRankSum=1.974;VQSLOD=2.8584;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:34:18.43:0,18,191	./.	0/0:34,0:12:2.37:0,2,8	0/0:50,0:17:3:0,3,25	0/0:17,2:19:1.60:0,2,5	0/1:19,1:20:20.99:78,0,21	1/1:22,1:22:4.66:21,5,0	0/0:19,0:17:10.87:0,11,49	0/0:8,2:10:0.03:0,0,2	0/1:13,1:12:10.65:41,0,11	1/1:19,2:22:13.21:229,13,0	0/1:18,0:18:5.78:6,0,85	0/1:9,3:12:38.54:81,0,39	0/1:8,5:13:83.43:83,0,90	0/1:18,0:18:17.98:18,0,80	0/0:13,0:13:17.63:0,18,217	0/1:37,2:39:19.97:158,0,20	0/0:18,0:17:32.55:0,33,440	0/1:15,1:14:60.84:87,0,61	0/1:6,3:10:25.06:59,0,25	0/1:38,8:45:99:212,0,113	0/0:11,0:10:0:0,0,0	0/0:9,1:11:0:0,0,0	0/1:27,7:35:99:172,0,128	0/0:19,0:19:12.01:0,12,160	1/1:13,1:13:8.68:62,9,0	0/1:10,2:12:2.63:52,0,3	1/1:3,1:6:3:28,3,0
chr10	15716930	.	TGA	T	534.43	PASS	AB=0.978;AC=19;AF=0.365;AN=52;BaseQRankSum=0.118;DP=471;FS=15.468;HRun=0;HaplotypeScore=135.1374;InbreedingCoeff=-0.4523;MQ=42.65;MQ0=26;MQRankSum=1.892;QD=1.54;ReadPosRankSum=-0.346;VQSLOD=1.8313;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:31:3.73:4,0,148	./.	0/0:12,0:1:3.01:0,3,32	0/1:20,0:4:0.76:1,0,21	0/1:14,4:18:2.51:3,0,27	0/1:19,0:19:29.45:29,0,103	0/0:21,1:20:19.75:0,20,199	0/1:17,0:14:50.82:51,0,104	0/1:8,0:8:14.24:14,0,24	0/1:14,0:12:6.69:7,0,80	0/1:16,3:18:6.73:121,0,7	0/1:14,1:15:64.39:64,0,85	0/1:11,0:11:31.76:32,0,80	0/1:14,0:12:38.66:39,0,135	0/1:20,0:20:99:117,0,114	0/0:10,0:9:0.94:0,1,74	0/1:35,0:34:33.88:34,0,251	0/0:20,0:20:8.58:0,9,186	0/1:15,0:12:63.22:63,0,86	0/0:13,0:12:3.21:0,3,138	0/1:47,0:44:58.79:59,0,240	0/0:16,0:13:2.71:0,3,14	./.	0/1:32,0:31:11.86:12,0,344	0/0:14,0:13:8.13:0,8,62	0/0:9,0:6:0.98:0,1,66	0/1:8,0:8:7.85:8,0,10	1/1:3,0:3:2.74:12,3,0
chr10	15716942	.	TGA	T	3392.52	PASS	AB=0.837;AC=28;AF=0.519;AN=54;BaseQRankSum=-3.643;DP=485;FS=3.050;HRun=0;HaplotypeScore=122.0174;InbreedingCoeff=-0.4751;MQ=44.59;MQ0=23;MQRankSum=1.383;QD=7.46;ReadPosRankSum=0.039;VQSLOD=3.4028;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:27,5:30:81.64:250,0,82	./.	0/1:16,0:3:13.99:20,0,14	0/1:25,0:5:21.39:21,0,79	0/1:18,3:21:52.16:52,0,53	0/1:17,1:18:45.33:232,0,45	0/1:25,1:25:33.81:34,0,171	0/1:16,2:16:30.89:199,0,31	1/1:2,7:9:6.02:90,6,0	0/0:11,0:9:19.67:0,20,117	0/1:20,0:19:70.56:71,0,78	0/1:8,6:14:32.92:133,0,33	1/1:4,7:11:3.11:96,3,0	0/1:5,8:11:0.01:166,0,0	0/1:10,11:21:99:187,0,108	0/0:7,0:6:8.96:0,9,71	0/1:32,5:36:90.99:381,0,91	0/1:14,7:21:78.15:78,0,197	0/1:10,3:12:5.66:156,0,6	0/1:8,4:11:36.93:113,0,37	0/1:16,28:41:12.76:360,0,13	0/1:12,4:13:2.44:35,0,2	1/1:9,0:9:11.97:116,12,0	0/1:13,24:36:15.49:501,0,15	0/0:10,2:11:8.90:0,9,67	0/1:11,0:8:10.37:10,0,76	0/1:8,0:8:25.22:74,0,25	1/1:3,0:3:2.96:19,3,0
chr10	15716944	.	A	AGT	831.53	PASS	AB=0.958;AC=19;AF=0.380;AN=50;BaseQRankSum=-2.924;DP=479;FS=2.555;HRun=0;HaplotypeScore=131.1281;InbreedingCoeff=-0.0221;MQ=44.98;MQ0=22;MQRankSum=0.638;QD=2.81;ReadPosRankSum=-4.176;VQSLOD=1.4147;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:29,1:30:7.31:120,0,7	./.	0/0:14,0:3:8.85:0,9,58	0/0:25,0:6:5.16:0,5,48	0/0:21,0:21:10.92:0,11,84	0/1:17,0:17:13.95:14,0,81	0/1:24,1:25:84.96:85,0,172	0/1:19,0:17:38.45:38,0,46	1/1:9,0:9:2.79:21,3,0	0/0:11,0:9:20.62:0,21,133	0/0:22,0:21:12.82:0,13,131	1/1:13,1:14:8.41:85,8,0	0/0:11,0:11:5.36:0,5,22	0/0:12,0:10:1.22:0,1,24	1/1:23,0:23:18.40:145,18,0	./.	0/0:38,0:37:25.99:0,26,186	0/1:19,1:20:5.99:81,0,6	0/1:13,0:12:4.90:19,0,5	0/1:11,0:11:15.30:75,0,15	0/1:39,1:37:31.08:67,0,31	0/1:14,1:13:6.75:41,0,7	1/1:9,0:9:5.26:29,5,0	0/1:34,0:33:26.55:90,0,27	0/0:11,0:11:0.47:0,0,1	0/1:11,1:9:72.64:73,0,90	0/0:7,0:7:6.81:0,7,43	./.
chr10	15717783	.	T	TG	3703.22	PASS	AB=0.738;AC=23;AF=0.411;AN=56;BaseQRankSum=13.152;DP=602;FS=3.996;HRun=1;HaplotypeScore=152.1554;InbreedingCoeff=0.0640;MQ=59.97;MQ0=0;MQRankSum=-3.559;QD=9.30;ReadPosRankSum=3.877;VQSLOD=1.7044;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:29,4:32:45.99:46,0,73	1/1:0,10:10:29.96:244,30,0	0/0:22,0:16:46.96:0,47,624	0/0:25,0:19:23.43:0,23,543	0/1:9,17:26:52.47:308,0,52	0/1:12,6:18:76.55:152,0,77	0/1:8,6:14:23.52:111,0,24	0/1:18,12:30:48.35:284,0,48	0/0:16,0:16:44.44:0,44,222	1/1:6,17:23:13.85:429,14,0	0/1:15,14:29:45.97:234,0,46	0/1:13,4:17:23.98:49,0,24	0/0:20,0:20:53.33:0,53,263	0/0:22,0:22:37.96:0,38,282	0/1:10,8:18:8.82:81,0,9	0/1:11,6:17:9.72:99,0,10	1/1:9,27:36:24.34:545,24,0	0/1:19,5:24:79.63:80,0,165	0/0:21,0:21:54.29:0,54,256	0/0:23,0:23:61.23:0,61,301	0/0:14,0:14:33.08:0,33,203	0/1:14,6:20:10.27:33,0,10	0/0:24,0:24:39.49:0,39,280	0/0:17,0:17:43.08:0,43,226	0/1:19,7:25:17.51:104,0,18	0/1:12,17:29:24.21:424,0,24	1/1:5,13:18:32.26:309,32,0	1/1:4,6:10:19.95:171,20,0
chr10	15717784	.	T	TG	3508.57	PASS	AB=0.739;AC=23;AF=0.411;AN=56;BaseQRankSum=15.013;DP=606;FS=8.848;HRun=0;HaplotypeScore=152.2406;InbreedingCoeff=0.0481;MQ=59.87;MQ0=0;MQRankSum=-3.805;QD=8.77;ReadPosRankSum=5.943;VQSLOD=3.2877;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:32:40.93:41,0,59	1/1:0,10:10:29.96:244,30,0	0/0:24,0:17:46.96:0,47,614	0/0:25,0:19:28.49:0,28,600	0/1:9,16:26:51.26:308,0,51	0/1:11,6:17:94.11:105,0,94	0/1:8,6:14:47.89:83,0,48	0/1:20,12:32:36.43:296,0,36	0/0:16,0:16:44.44:0,44,222	1/1:7,17:24:13.79:429,14,0	0/1:16,14:30:34.25:237,0,34	0/1:13,0:17:26.07:49,0,26	0/0:20,0:20:53.33:0,53,263	0/0:21,0:21:59.91:0,60,307	0/1:10,0:18:19.84:79,0,20	0/1:12,0:18:9.72:99,0,10	1/1:10,27:37:13.14:530,13,0	0/1:18,0:23:37.19:37,0,188	0/0:21,0:21:53.81:0,54,253	0/0:23,0:23:36.58:0,37,264	0/0:16,0:16:33.08:0,33,203	0/1:14,0:20:10.27:33,0,10	0/0:23,0:23:61.44:0,61,305	0/0:17,0:17:43.12:0,43,228	0/1:19,0:25:17.97:104,0,18	0/1:12,17:29:37.53:401,0,38	1/1:5,13:18:32.26:309,32,0	1/1:2,6:8:14.01:125,14,0
chr10	15718724	.	AG	A	7952.06	PASS	AB=0.600;AC=37;AF=0.661;AN=56;BaseQRankSum=4.364;DP=631;FS=1.762;HRun=10;HaplotypeScore=71.4835;InbreedingCoeff=0.9250;MQ=74.91;MQ0=0;MQRankSum=0.206;QD=18.16;ReadPosRankSum=6.639;VQSLOD=5.1166;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,2:37:15.74:0,16,499	1/1:3,5:8:17.91:147,18,0	0/0:19,0:20:25.82:0,26,246	0/0:20,0:18:24.25:0,24,307	1/1:6,18:24:56.99:494,57,0	0/1:6,12:18:3.20:204,0,3	1/1:3,25:28:74.98:651,75,0	1/1:6,9:15:23.95:202,24,0	1/1:5,23:28:49.09:530,49,0	1/1:4,22:26:56.58:462,57,0	1/1:5,8:13:17.98:156,18,0	0/0:19,0:19:31.30:0,31,313	1/1:3,15:18:41.99:364,42,0	1/1:4,15:19:41.99:365,42,0	0/0:20,0:20:23.06:0,23,450	0/0:16,1:17:7.01:0,7,283	1/1:9,29:38:77.97:677,78,0	0/0:19,0:19:54.06:0,54,542	1/1:6,10:16:23.95:204,24,0	1/1:3,18:21:47.85:400,48,0	1/1:12,37:50:99:891,104,0	0/0:27,0:27:51.06:0,51,509	1/1:2,22:24:59.97:521,60,0	1/1:7,17:24:47.97:416,48,0	0/0:14,0:14:27.04:0,27,269	1/1:5,24:29:68.91:588,69,0	1/1:7,25:32:56.96:495,57,0	1/1:0,7:7:21:182,21,0
chr10	15719745	.	G	GT	13632.73	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-11.230;DP=494;FS=12.867;HRun=1;HaplotypeScore=48.4935;InbreedingCoeff=0.9805;MQ=86.13;MQ0=0;MQRankSum=-4.148;QD=41.06;ReadPosRankSum=1.511;VQSLOD=4.1586;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:63.20:0,63,817	1/1:0,3:3:6.02:90,6,0	0/0:19,0:19:47.64:0,48,586	0/0:24,0:24:67.27:0,67,786	1/1:0,9:9:27.09:405,27,0	1/1:0,13:13:39.13:584,39,0	1/1:1,27:28:81.27:1203,81,0	1/1:0,27:27:81.26:1193,81,0	1/1:0,18:18:54.18:804,54,0	1/1:1,20:21:57.15:810,57,0	1/1:0,13:13:30.06:422,30,0	0/0:17,0:17:51.17:0,51,661	1/1:0,22:22:63.21:944,63,0	1/1:1,13:14:33.11:493,33,0	0/0:21,0:21:53.37:0,53,680	0/0:10,0:10:30.10:0,30,389	1/1:1,24:25:72.24:1078,72,0	0/0:12,0:12:36.12:0,36,467	1/1:0,21:21:63.19:921,63,0	1/1:1,9:10:27.01:355,27,0	1/1:1,35:36:96.33:1435,96,0	0/0:11,0:11:30.09:0,30,376	1/1:1,5:6:15.05:225,15,0	1/1:1,23:24:60.20:899,60,0	0/0:24,0:24:56.48:0,56,740	1/1:0,18:18:54.17:786,54,0	1/1:0,15:15:39.13:583,39,0	1/1:0,9:9:27.09:404,27,0
chr10	15720709	.	C	CG	24050.72	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-10.189;DP=680;FS=4.346;HRun=2;HaplotypeScore=59.2295;InbreedingCoeff=0.9976;MQ=89.34;MQ0=0;MQRankSum=-11.509;QD=38.24;ReadPosRankSum=6.488;VQSLOD=4.8472;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,56:56:99:2306,163,0	1/1:1,7:8:21.07:293,21,0	0/0:27,0:27:78.82:0,79,890	0/0:24,0:24:63.19:0,63,767	1/1:2,16:18:47.95:648,48,0	1/1:0,14:14:39.13:561,39,0	1/1:1,28:29:72.24:1036,72,0	1/1:2,28:30:81.22:1089,81,0	1/1:0,16:16:48.16:690,48,0	1/1:0,21:21:60.18:844,60,0	1/1:0,12:12:33.11:475,33,0	1/1:0,30:30:78.26:1122,78,0	1/1:0,24:24:72.24:1032,72,0	1/1:0,19:19:54.18:777,54,0	1/1:1,27:28:75.25:1079,75,0	1/1:1,25:26:75.25:1079,75,0	1/1:3,31:34:75.25:1079,75,0	1/1:0,26:26:66.22:949,66,0	1/1:1,22:23:63.20:886,63,0	1/1:0,20:20:51.17:732,51,0	1/1:1,39:40:99:1510,105,0	1/1:2,18:20:48.16:691,48,0	1/1:1,16:17:39.13:561,39,0	1/1:0,32:32:90.30:1294,90,0	1/1:0,22:22:63.21:906,63,0	1/1:3,28:31:81.27:1163,81,0	1/1:2,17:19:51.17:731,51,0	1/1:0,14:14:36.12:517,36,0
chr10	15721813	.	T	TA	9179.55	PASS	AC=50;AF=0.926;AN=54;BaseQRankSum=-4.904;DP=390;FS=3.012;HRun=8;HaplotypeScore=36.7625;InbreedingCoeff=0.6258;MQ=60.20;MQ0=13;MQRankSum=-0.720;QD=25.79;ReadPosRankSum=3.289;VQSLOD=5.1942;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,29:31:72.21:831,72,0	1/1:0,6:6:15.04:171,15,0	0/0:16,0:4:8.97:0,9,75	0/0:18,0:7:2.31:0,2,50	1/1:4,20:24:60.18:687,60,0	1/1:3,26:29:69.21:796,69,0	1/1:1,6:7:12.03:131,12,0	1/1:7,26:29:81.22:914,81,0	1/1:1,6:7:18.05:208,18,0	1/1:1,21:22:63.17:716,63,0	1/1:3,11:14:5.59:301,6,0	1/1:2,6:8:18.05:208,18,0	1/1:0,5:5:8.96:102,9,0	1/1:0,6:6:15.04:173,15,0	1/1:1,8:9:18.05:208,18,0	1/1:0,4:4:12.03:136,12,0	1/1:11,28:31:57.25:907,57,0	1/1:2,16:17:33.10:381,33,0	1/1:2,12:14:26.74:302,27,0	1/1:0,7:7:21.06:242,21,0	1/1:1,3:4:9.03:104,9,0	./.	1/1:2,3:5:5.99:66,6,0	1/1:0,4:4:9.03:104,9,0	1/1:1,13:14:36.11:415,36,0	1/1:5,9:11:27.08:310,27,0	1/1:4,12:15:9.25:351,9,0	1/1:3,12:15:36.11:415,36,0
chr10	15722251	.	G	GT	1324.74	PASS	AB=1.000;AC=51;AF=0.911;AN=56;BaseQRankSum=1.030;DP=517;FS=1.927;HRun=11;HaplotypeScore=138.8344;InbreedingCoeff=0.3078;MQ=54.92;MQ0=13;MQRankSum=-0.802;QD=2.84;ReadPosRankSum=0.292;VQSLOD=0.6956;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:38,0:27:13.13:48,13,0	1/1:5,0:5:6.63:40,7,0	0/0:49,1:16:10.22:0,10,61	0/1:45,0:18:41.48:42,0,41	1/1:23,1:24:34.84:158,35,0	1/1:19,1:21:4.32:137,4,0	1/1:23,2:25:18.56:158,19,0	1/1:26,1:22:17.74:139,18,0	1/1:11,0:8:4.09:12,4,0	1/1:15,3:15:8.61:91,9,0	1/1:16,1:14:8.44:60,8,0	1/1:19,0:17:12.24:35,12,0	1/1:8,0:8:2.35:10,2,0	1/1:10,0:8:4.81:17,5,0	1/1:15,0:8:2.96:8,3,0	0/1:9,0:5:0:0,0,0	1/1:13,2:14:9.65:52,10,0	1/1:9,0:6:2.49:6,2,0	1/1:22,0:19:19.72:85,20,0	1/1:12,0:7:5.22:21,5,0	1/1:9,0:9:1.71:4,2,0	1/1:8,0:7:2.03:5,2,0	1/1:11,0:8:4.69:21,5,0	1/1:8,0:4:2.96:19,3,0	1/1:14,0:11:4.05:11,4,0	1/1:26,1:28:23.33:154,23,0	1/1:25,2:25:13.70:103,14,0	0/1:7,0:5:0.84:1,0,6
chr10	15722262	.	TGGGGGG	T	10697.07	PASS	AB=0.554;AC=46;AF=0.852;AN=54;BaseQRankSum=-0.723;DP=481;FS=9.834;HRun=6;HaplotypeScore=104.3881;InbreedingCoeff=0.3121;MQ=45.56;MQ0=28;MQRankSum=-3.003;QD=33.02;ReadPosRankSum=5.858;VQSLOD=0.9056;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:1,31:21:23.47:1103,0,23	1/1:1,1:4:9.03:143,9,0	0/0:78,0:14:25.36:0,25,594	0/0:71,0:20:46.18:0,46,951	1/1:4,12:19:50.60:876,51,0	1/1:12,2:18:51.85:584,52,0	1/1:10,4:19:50.14:652,50,0	1/1:11,4:15:38.87:554,39,0	1/1:0,11:8:15.05:366,15,0	1/1:8,4:11:23.36:263,23,0	1/1:6,2:10:21.02:268,21,0	1/1:0,15:13:27.09:641,27,0	1/1:0,5:5:9.03:207,9,0	1/1:0,7:5:15.05:354,15,0	1/1:0,12:5:9.03:220,9,0	./.	0/1:4,10:13:47.99:281,0,48	1/1:0,6:3:6.49:150,6,0	0/1:1,15:14:53.25:727,0,53	1/1:0,10:5:15.05:365,15,0	0/1:3,5:8:66.84:208,0,67	1/1:1,3:2:6.02:143,6,0	1/1:2,7:6:12.04:262,12,0	1/1:0,7:2:6.02:110,6,0	1/1:0,11:8:24.08:580,24,0	1/1:9,5:22:62.22:846,62,0	1/1:5,9:17:45.81:754,46,0	1/1:3,2:3:5.90:42,6,0
chr10	15723943	.	A	AT	12619.61	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-4.423;DP=613;FS=15.075;HRun=10;HaplotypeScore=92.4617;InbreedingCoeff=0.8632;MQ=72.77;MQ0=0;MQRankSum=-4.751;QD=21.68;ReadPosRankSum=4.483;VQSLOD=4.1641;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:10,30:44:28.23:690,28,0	1/1:1,11:12:30.08:320,30,0	0/0:14,0:14:8.68:0,9,165	0/0:17,0:17:25.47:0,25,241	1/1:3,16:19:45.08:466,45,0	1/1:3,12:15:9.63:297,10,0	1/1:5,20:25:54.13:574,54,0	1/1:14,29:45:63.39:799,63,0	1/1:4,23:29:53.84:540,54,0	1/1:4,21:25:60.99:623,61,0	1/1:2,16:18:36.05:371,36,0	1/1:4,16:21:44.98:462,45,0	1/1:5,9:14:24.06:256,24,0	1/1:5,7:12:3.41:229,3,0	1/1:3,25:28:63.16:672,63,0	1/1:0,14:14:33.08:352,33,0	1/1:4,20:24:47.99:494,48,0	1/1:4,13:17:33.08:352,33,0	1/1:6,19:26:56.17:564,56,0	1/1:1,19:20:39.10:412,39,0	1/1:9,12:22:44.54:440,45,0	1/1:4,19:23:49.81:505,50,0	1/1:4,12:16:38.12:383,38,0	1/1:0,25:26:75.02:782,75,0	1/1:6,17:23:48.12:512,48,0	1/1:0,21:21:60.15:639,60,0	1/1:3,26:28:35.48:583,35,0	1/1:4,9:14:30.79:304,31,0
chr10	15724326	.	TC	T	3801.47	PASS	AB=1.000;AC=39;AF=0.722;AN=54;BaseQRankSum=-5.536;DP=317;FS=12.538;HRun=7;HaplotypeScore=52.3855;InbreedingCoeff=0.6762;MQ=73.55;MQ0=6;MQRankSum=0.789;QD=18.10;ReadPosRankSum=5.481;VQSLOD=2.0762;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,12:16:21.04:213,21,0	1/1:3,5:8:18.04:183,18,0	0/0:18,1:9:10.22:0,10,97	0/0:34,0:22:15.81:0,16,233	1/1:3,9:12:22.58:211,23,0	1/1:5,6:11:30.07:305,30,0	1/1:6,9:15:33.48:325,33,0	1/1:1,11:12:33.07:336,33,0	0/1:7,0:7:8.46:8,0,10	1/1:1,6:7:15.02:145,15,0	1/1:1,7:8:15.03:153,15,0	1/1:5,4:9:13.25:118,13,0	0/1:7,0:7:0.05:0,0,6	0/0:8,0:8:2.07:0,2,29	1/1:2,5:7:14.67:152,15,0	1/1:2,7:9:12.02:122,12,0	1/1:3,9:12:30.07:305,30,0	1/1:5,1:5:6.01:61,6,0	0/1:5,0:5:1.24:1,0,3	./.	0/0:15,0:15:2.90:0,3,39	1/1:1,8:9:15.03:152,15,0	0/0:6,0:6:2.12:0,2,18	0/0:19,0:20:11.73:0,12,66	1/1:2,10:12:24.05:244,24,0	1/1:5,7:12:21.05:214,21,0	1/1:1,9:10:27.06:275,27,0	1/1:0,15:15:27.06:275,27,0
chr10	15724331	.	CCCT	C	654.30	PASS	AB=1.000;AC=15;AF=0.278;AN=54;BaseQRankSum=-0.548;DP=303;FS=1.540;HRun=0;HaplotypeScore=71.2766;InbreedingCoeff=0.6583;MQ=67.20;MQ0=7;MQRankSum=-3.262;QD=6.23;ReadPosRankSum=-4.227;VQSLOD=1.0020;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:12:20.35:0,20,136	0/0:7,0:7:11.17:0,11,96	0/0:24,0:9:10.49:0,10,121	0/1:40,0:19:6.13:6,0,256	0/0:13,0:13:18.63:0,19,131	0/0:10,0:10:14.59:0,15,132	0/0:14,0:14:30.39:0,30,202	0/0:15,0:15:41.65:0,42,296	1/1:4,0:4:10.58:123,11,0	0/1:6,0:6:1.61:2,0,33	0/0:7,0:7:14.70:0,15,99	0/0:8,0:8:11.13:0,11,65	1/1:7,0:7:4.97:126,5,0	0/1:9,0:9:1.73:80,0,2	0/0:7,0:7:14.88:0,15,107	0/0:8,0:8:14.91:0,15,117	0/0:10,0:10:17.42:0,17,173	0/0:4,0:3:5.95:0,6,43	1/1:3,0:3:8:57,8,0	./.	1/1:10,2:12:8.98:114,9,0	0/0:8,0:8:14.86:0,15,104	1/1:6,0:6:1.57:50,2,0	1/1:16,2:17:28.45:261,28,0	0/0:14,0:14:23.87:0,24,187	0/0:9,0:9:23.46:0,23,154	0/0:11,0:11:29.71:0,30,205	0/0:15,0:15:26.78:0,27,190
chr10	15724333	.	CT	C	1483	PASS	AB=1.000;AC=47;AF=0.870;AN=54;BaseQRankSum=-2.927;DP=302;FS=3.231;HRun=1;HaplotypeScore=60.7049;InbreedingCoeff=0.3494;MQ=66.55;MQ0=8;MQRankSum=-2.080;QD=6.42;ReadPosRankSum=5.374;VQSLOD=0.9530;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,0:11:16.95:57,17,0	1/1:6,0:6:14.16:61,14,0	0/0:26,0:9:12.34:0,12,128	0/0:42,2:20:12.33:0,12,209	1/1:13,0:13:11.37:56,11,0	1/1:10,0:10:23.02:79,23,0	1/1:13,0:13:28.09:117,28,0	0/1:15,0:15:33.72:46,0,34	1/1:2,3:5:12.01:110,12,0	1/1:6,0:6:6.83:19,7,0	1/1:7,0:7:11.32:47,11,0	1/1:6,0:6:13.39:70,13,0	1/1:5,1:6:13.91:93,14,0	1/1:7,2:9:9.31:91,9,0	1/1:6,1:7:10.12:29,10,0	1/1:8,0:8:6.40:32,6,0	1/1:11,0:11:26.39:111,26,0	1/1:4,0:3:4.96:19,5,0	1/1:1,2:3:8.74:65,9,0	./.	1/1:10,2:12:9.70:56,10,0	1/1:8,0:8:10.98:36,11,0	1/1:2,4:6:3.10:34,3,0	1/1:13,4:16:25.11:162,25,0	0/1:13,0:13:19.52:46,0,20	0/1:9,0:9:2.31:32,0,2	1/1:10,0:10:7.27:82,7,0	1/1:15,0:15:20.85:70,21,0
chr10	15724335	.	CCCCCT	C	276.79	PASS	AB=0.932;AC=8;AF=0.148;AN=54;BaseQRankSum=4.383;DP=294;FS=5.630;HRun=0;HaplotypeScore=79.3379;InbreedingCoeff=0.3311;MQ=63.74;MQ0=8;MQRankSum=-4.014;QD=5.54;ReadPosRankSum=-0.269;VQSLOD=1.3197;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:13:27.05:0,27,621	0/0:5,0:5:15.05:0,15,306	0/0:24,0:7:11.36:0,11,139	0/0:45,0:19:17.95:0,18,189	0/0:14,0:14:20.69:0,21,531	0/0:9,0:9:23.61:0,24,537	0/0:14,0:14:39.55:0,40,771	0/0:15,0:15:45.15:0,45,1171	1/1:6,1:7:12.40:157,12,0	0/0:4,0:4:6.02:0,6,184	0/0:5,0:5:15.05:0,15,330	0/0:6,0:6:12.49:0,12,216	0/1:6,0:6:15.36:60,0,15	0/1:10,0:10:15.71:61,0,16	0/0:7,0:7:15.05:0,15,369	0/0:8,0:8:15.05:0,15,420	0/0:11,0:11:30.08:0,30,661	0/0:5,0:4:12.01:0,12,207	1/1:2,1:3:2.63:42,3,0	./.	0/1:10,1:11:3.70:4,0,17	0/0:8,0:8:18.04:0,18,383	0/0:4,2:6:4.35:0,4,18	0/1:10,3:13:7.75:82,0,8	0/0:12,0:12:27.09:0,27,698	0/0:9,0:9:24.04:0,24,499	0/0:10,0:10:30.10:0,30,744	0/0:12,0:12:27.09:0,27,571
chr10	15724337	.	CCCT	C	220.67	PASS	AB=0.917;AC=8;AF=0.160;AN=50;BaseQRankSum=3.933;DP=293;FS=5.783;HRun=0;HaplotypeScore=71.2113;InbreedingCoeff=0.6000;MQ=64.33;MQ0=10;MQRankSum=-3.548;QD=5.96;ReadPosRankSum=-0.807;VQSLOD=1.3655;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:12:27.09:0,27,507	0/0:5,0:5:9.03:0,9,148	0/0:28,0:8:3.39:0,3,85	0/0:48,0:18:19.37:0,19,168	0/0:15,0:15:18.42:0,18,370	0/0:7,0:7:18.05:0,18,341	0/0:14,0:14:32.64:0,33,506	0/0:15,0:15:42.14:0,42,832	1/1:6,1:7:12.41:134,12,0	0/0:4,0:4:9.01:0,9,153	0/0:5,0:5:12.01:0,12,163	0/0:6,0:6:6.49:0,6,114	0/1:4,1:5:2.03:43,0,2	0/1:10,0:10:19.58:58,0,20	0/0:7,0:7:12.04:0,12,220	0/0:8,0:8:15.05:0,15,293	0/0:12,0:12:25.84:0,26,412	0/0:5,0:4:12.01:0,12,159	1/1:2,1:3:7.42:50,7,0	./.	./.	0/0:7,0:7:15.03:0,15,249	./.	1/1:11,1:12:8.60:71,9,0	0/0:11,0:11:24.08:0,24,483	0/0:9,0:9:15.05:0,15,297	0/0:10,0:10:27.09:0,27,531	0/0:11,0:11:21.01:0,21,272
chr10	15724362	.	C	CCTCT	5272.56	PASS	AB=0.988;AC=39;AF=0.696;AN=56;BaseQRankSum=2.048;DP=368;FS=4.551;HRun=0;HaplotypeScore=86.4246;InbreedingCoeff=0.7321;MQ=62.39;MQ0=11;MQRankSum=-6.974;QD=21.26;ReadPosRankSum=-1.192;VQSLOD=4.1144;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:51.14:0,51,824	1/1:2,1:3:8.99:150,9,0	0/0:63,0:19:20.02:0,20,310	0/1:83,0:30:15.98:16,0,422	1/1:11,8:19:8.98:100,9,0	1/1:3,1:4:6.01:101,6,0	1/1:6,3:10:20.85:381,21,0	1/1:9,3:10:18.06:434,18,0	1/1:7,2:9:14.97:254,15,0	1/1:3,4:7:20.98:426,21,0	1/1:3,2:5:0.91:73,1,0	0/0:4,0:4:12.04:0,12,208	1/1:7,1:8:15.05:318,15,0	1/1:3,6:9:21:477,21,0	0/0:1,0:1:3.01:0,3,53	0/0:7,0:7:21.07:0,21,370	1/1:5,6:12:21.03:469,21,0	0/0:13,0:12:30.09:0,30,501	1/1:4,4:8:24.04:503,24,0	1/1:3,4:7:0.94:2,1,0	1/1:7,5:11:6.48:102,6,0	0/0:6,0:6:15.04:0,15,238	1/1:2,2:4:6.01:100,6,0	1/1:9,7:16:21.02:378,21,0	0/0:8,0:8:18.06:0,18,313	1/1:2,7:9:18.05:408,18,0	1/1:2,5:7:18.06:426,18,0	1/1:1,2:3:6.02:153,6,0
chr10	15724371	.	C	CT	346.69	PASS	AB=0.934;AC=12;AF=0.214;AN=56;BaseQRankSum=6.355;DP=386;FS=10.245;HRun=1;HaplotypeScore=87.0898;InbreedingCoeff=-0.2034;MQ=61.18;MQ0=12;MQRankSum=-7.550;QD=3.24;ReadPosRankSum=5.055;VQSLOD=-0.6844;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:54.18:0,54,753	0/1:3,1:4:30.44:30,0,41	0/0:69,0:19:50.40:0,50,595	0/0:83,0:28:25.57:0,26,583	0/0:16,0:16:18.79:0,19,133	0/0:4,0:4:0.70:0,1,52	0/1:10,1:11:34.02:34,0,159	0/1:7,2:8:64.71:116,0,65	0/0:7,0:7:3.94:0,4,157	0/1:8,0:8:27.28:27,0,63	0/0:6,0:6:0.78:0,1,72	0/0:7,0:7:18.06:0,18,248	0/0:7,0:7:4.24:0,4,107	0/1:11,0:11:17.60:18,0,173	0/0:1,0:1:3.01:0,3,42	0/0:7,0:7:21.07:0,21,294	0/1:13,1:14:68.02:68,0,116	0/0:14,0:13:36.12:0,36,494	0/1:11,1:12:46.73:47,0,195	0/0:7,0:7:5.19:0,5,47	0/0:12,0:11:9.28:0,9,71	0/0:5,0:5:15.05:0,15,210	0/0:4,0:4:1.81:0,2,61	0/1:18,1:19:25.77:26,0,231	0/0:8,0:8:24.08:0,24,332	0/1:9,0:9:43.59:44,0,47	0/1:8,0:8:21.84:64,0,22	1/1:2,0:2:4.87:17,5,0
chr10	15724383	.	TC	T	4370.03	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=5.346;DP=374;FS=1.127;HRun=6;HaplotypeScore=73.2208;InbreedingCoeff=0.8910;MQ=65.27;MQ0=5;MQRankSum=-4.604;QD=24.14;ReadPosRankSum=-0.974;VQSLOD=3.9948;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:60.20:0,60,787	1/1:0,2:2:3.01:32,3,0	0/0:60,0:22:12.45:0,12,346	0/0:61,1:24:43.80:0,44,430	1/1:2,12:14:27.06:290,27,0	1/1:0,5:5:15.04:161,15,0	1/1:1,13:14:36.05:374,36,0	1/1:4,4:7:12.03:129,12,0	1/1:0,10:10:27.07:290,27,0	1/1:2,8:10:24.06:258,24,0	1/1:0,7:8:19.60:197,20,0	0/0:9,0:9:27.09:0,27,350	1/1:0,8:8:21.05:225,21,0	1/1:0,12:12:36.09:386,36,0	0/0:2,0:2:6.02:0,6,79	0/0:8,0:8:18.06:0,18,234	1/1:1,14:15:37.65:391,38,0	0/0:18,0:17:45.15:0,45,588	1/1:0,12:12:33.08:354,33,0	1/1:1,3:4:3.01:32,3,0	1/1:4,14:18:23.92:257,24,0	0/0:5,0:5:15.05:0,15,197	1/1:1,5:6:15.04:161,15,0	1/1:3,14:17:33.55:354,34,0	0/0:7,0:7:18.06:0,18,237	1/1:0,7:7:18.05:193,18,0	1/1:2,7:9:21.05:221,21,0	1/1:0,2:2:6.02:64,6,0
chr10	15725204	.	ATC	A	545.50	PASS	AB=0.921;AC=13;AF=0.241;AN=54;BaseQRankSum=4.901;DP=477;FS=6.541;HRun=0;HaplotypeScore=76.2107;InbreedingCoeff=-0.3408;MQ=72.64;MQ0=11;MQRankSum=1.907;QD=2.65;ReadPosRankSum=-3.219;VQSLOD=0.2522;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:18,1:19:64.42:64,0,152	0/0:5,0:5:7.92:0,8,137	0/0:38,0:20:38.63:0,39,558	0/1:29,0:11:11.84:12,0,180	0/1:19,3:22:88.85:89,0,308	0/1:5,1:6:63.45:63,0,67	0/0:27,0:27:45.35:0,45,460	0/0:12,0:12:29.79:0,30,336	0/1:19,0:19:99:109,0,296	0/0:13,0:13:5.48:0,5,253	0/1:12,1:13:27.26:27,0,133	0/0:7,0:7:3.63:0,4,204	0/1:12,0:12:73.22:73,0,93	0/1:12,0:11:20.90:21,0,168	0/1:17,0:16:99:135,0,212	0/1:14,0:14:47.87:48,0,153	0/0:32,0:32:42.56:0,43,537	0/0:15,10:25:15.14:0,15,375	0/0:17,1:18:33.55:0,34,367	0/1:13,6:19:3.77:4,0,310	0/0:11,0:11:25.94:0,26,307	0/1:9,3:11:8.34:8,0,136	0/1:9,3:12:35.47:35,0,108	0/0:27,0:26:9.30:0,9,496	0/0:13,1:14:2.16:0,2,239	0/0:23,0:23:14.74:0,15,507	0/0:18,0:18:21.08:0,21,382	./.
chr10	15725548	.	G	GGT	14731.36	PASS	AB=0.598;AC=28;AF=0.500;AN=56;BaseQRankSum=-17.695;DP=838;FS=14.841;HRun=0;HaplotypeScore=159.1840;InbreedingCoeff=0.3043;MQ=65.09;MQ0=8;MQRankSum=3.859;QD=27.74;ReadPosRankSum=-0.249;VQSLOD=5.2408;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:58:99:0,102,503	1/1:4,9:13:21.07:336,21,0	0/0:51,0:34:34.43:0,34,347	0/0:36,0:24:34.40:0,34,336	0/1:8,19:25:17.40:713,0,17	1/1:7,16:24:10.42:639,10,0	0/1:11,23:35:13.87:920,0,14	1/1:15,26:41:80.93:1205,81,0	1/1:8,30:39:33.25:1020,33,0	0/1:9,20:29:41.64:821,0,42	1/1:6,9:15:24.03:384,24,0	0/0:4,0:23:45.45:0,45,224	0/1:7,20:27:41.72:834,0,42	1/1:3,17:22:18.20:780,18,0	0/0:8,0:40:76.70:0,77,377	0/0:5,0:22:36.93:0,37,181	0/1:7,18:25:11.76:803,0,12	0/0:3,0:27:48.29:0,48,238	0/1:13,9:24:33.31:391,0,33	1/1:5,21:26:21.21:803,21,0	0/1:23,35:60:99:1368,0,170	0/0:3,0:28:65.25:0,65,320	1/1:8,20:28:27.23:921,27,0	1/1:10,25:35:39.28:1115,39,0	0/0:1,0:22:51.13:0,51,252	0/1:9,21:30:11.77:789,0,12	0/1:6,17:23:20.79:668,0,21	0/1:2,6:8:6.28:221,0,6
chr10	15726626	.	TG	T	8578.09	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=7.800;DP=434;FS=9.274;HRun=2;HaplotypeScore=42.7927;InbreedingCoeff=0.9684;MQ=57.80;MQ0=23;MQRankSum=-0.662;QD=28.88;ReadPosRankSum=1.044;VQSLOD=3.2464;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:42:81.26:0,81,1194	1/1:0,10:10:27.09:350,27,0	0/0:7,0:6:18.03:0,18,244	0/0:12,0:9:18.61:0,19,211	1/1:0,11:11:24.08:312,24,0	1/1:2,16:15:39.13:506,39,0	1/1:1,22:22:57.19:740,57,0	1/1:2,18:19:54.15:674,54,0	1/1:0,6:6:12.04:156,12,0	1/1:1,10:10:30.10:390,30,0	1/1:0,16:15:33.11:428,33,0	0/0:6,0:6:15.05:0,15,225	1/1:0,4:4:6.02:78,6,0	1/1:1,7:7:15.05:195,15,0	0/0:11,0:9:24.04:0,24,334	0/0:7,0:7:21.07:0,21,315	1/1:6,29:29:72.23:935,72,0	0/0:30,0:28:75.25:0,75,1120	1/1:1,13:12:36.12:467,36,0	1/1:2,10:11:30.10:389,30,0	1/1:6,27:29:66.21:857,66,0	0/0:8,0:8:18.06:0,18,270	1/1:5,11:11:30.10:389,30,0	1/1:3,13:13:33.11:428,33,0	0/0:13,0:13:30.09:0,30,430	1/1:0,12:12:30.10:389,30,0	1/1:2,13:13:33.11:429,33,0	1/1:4,13:13:36.12:467,36,0
chr10	15726736	.	G	GGT	8141.11	PASS	AB=0.600;AC=37;AF=0.685;AN=54;BaseQRankSum=-2.008;DP=362;FS=1.661;HRun=0;HaplotypeScore=54.9688;InbreedingCoeff=0.8006;MQ=42.87;MQ0=6;MQRankSum=-11.300;QD=36.67;ReadPosRankSum=-1.010;VQSLOD=5.8359;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:57.19:0,57,798	1/1:1,8:9:18.06:323,18,0	0/0:14,0:4:9.03:0,9,126	0/0:17,0:8:15.51:0,16,181	1/1:3,10:13:18.06:323,18,0	1/1:4,23:27:66.23:1160,66,0	1/1:3,7:10:6.02:108,6,0	1/1:1,7:8:18.02:289,18,0	0/1:3,6:9:23.96:251,0,24	1/1:6,24:29:69.24:1240,69,0	1/1:1,14:15:33.11:592,33,0	0/0:14,0:14:39.13:0,39,544	1/1:1,5:6:9.03:161,9,0	1/1:1,6:6:12.04:215,12,0	0/0:10,1:11:27.09:0,27,378	0/0:15,0:14:42.14:0,42,588	1/1:2,5:7:12.04:213,12,0	0/0:34,0:33:96.32:0,96,1344	1/1:2,5:5:15.05:268,15,0	1/1:3,12:15:36.12:646,36,0	1/1:0,1:1:3.01:54,3,0	./.	1/1:0,5:5:12.04:212,12,0	1/1:0,2:1:3.01:54,3,0	0/0:12,0:12:30.10:0,30,420	1/1:2,27:28:69.24:1240,69,0	1/1:0,13:13:30.10:538,30,0	1/1:5,4:8:15.05:254,15,0
chr10	15726783	.	A	AT	702.21	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=1.880;DP=330;FS=7.904;HRun=2;HaplotypeScore=45.6511;InbreedingCoeff=0.7063;MQ=52.78;MQ0=23;MQRankSum=-1.847;QD=14.33;ReadPosRankSum=-1.827;VQSLOD=1.7643;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:41.88:0,42,409	0/0:3,0:3:8.91:0,9,61	0/0:37,0:9:3.77:0,4,75	0/0:41,0:9:4.47:0,4,45	0/0:10,0:10:20.68:0,21,137	0/0:16,0:14:32.60:0,33,223	0/0:8,0:7:11.75:0,12,71	0/0:12,0:11:17.95:0,18,144	0/1:9,0:9:15.46:160,0,15	0/0:14,0:12:32.62:0,33,220	0/0:6,0:6:8.82:0,9,54	0/0:4,0:4:11.96:0,12,117	1/1:4,2:6:11.99:123,12,0	1/1:4,0:4:5.98:53,6,0	0/0:11,0:11:26.99:0,27,249	0/0:13,0:12:35.19:0,35,353	0/0:13,0:13:29.47:0,29,187	0/0:33,0:31:71.94:0,72,713	1/1:12,2:11:20.89:208,21,0	1/1:5,2:7:17.60:148,18,0	1/1:1,1:2:6.02:70,6,0	0/0:1,0:1:3.01:0,3,36	1/1:2,2:4:9.03:109,9,0	1/1:3,0:3:1.55:4,2,0	0/0:10,0:9:17.93:0,18,166	0/0:14,0:14:35.60:0,36,242	0/0:6,0:6:14.85:0,15,105	0/0:10,0:10:20.79:0,21,144
chr10	15726785	.	T	TTA	858.29	PASS	AB=0.600;AC=15;AF=0.268;AN=56;BaseQRankSum=1.081;DP=333;FS=11.501;HRun=0;HaplotypeScore=50.1597;InbreedingCoeff=0.7341;MQ=52.43;MQ0=24;MQRankSum=-1.913;QD=15.89;ReadPosRankSum=-1.304;VQSLOD=1.6028;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:42:0,42,509	0/0:3,0:3:8.91:0,9,61	0/0:37,0:9:8.95:0,9,121	0/0:40,0:8:11.43:0,11,86	0/0:8,0:8:20.68:0,21,137	0/0:16,0:13:32.61:0,33,228	0/0:7,0:6:11.75:0,12,70	0/0:12,0:11:17.94:0,18,145	0/1:3,5:9:25.17:275,0,25	0/0:14,0:12:32.62:0,33,220	0/0:5,0:5:8.82:0,9,54	0/0:5,0:5:11.96:0,12,136	1/1:4,2:6:11.99:131,12,0	1/1:6,2:8:6.86:80,7,0	0/0:9,0:13:26.99:0,27,287	0/0:12,0:12:30.09:0,30,426	0/0:14,0:13:29.47:0,29,186	0/0:29,0:29:72.05:0,72,877	1/1:10,2:10:20.85:214,21,0	1/1:6,1:7:9.85:131,10,0	1/1:1,1:2:5.93:54,6,0	0/0:1,0:1:3.01:0,3,46	1/1:3,1:5:11.97:143,12,0	1/1:2,0:3:1.55:4,2,0	0/0:9,0:8:18.03:0,18,210	0/0:14,0:14:35.61:0,36,245	0/0:7,0:7:14.85:0,15,105	0/0:11,0:11:20.80:0,21,144
chr10	15726891	.	A	ATT	2028.64	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=0.333;DP=425;FS=6.214;HRun=0;HaplotypeScore=69.8041;InbreedingCoeff=0.8092;MQ=51.46;MQ0=61;MQRankSum=-0.457;QD=14.39;ReadPosRankSum=2.744;VQSLOD=2.5245;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:38:63.19:0,63,808	1/1:3,0:3:9.03:110,9,0	0/0:36,0:10:6.08:0,6,107	0/0:28,0:8:2.91:0,3,96	1/1:5,7:13:11.13:102,11,0	1/1:10,0:4:11.40:118,11,0	1/1:10,0:7:17.42:194,17,0	1/1:4,8:11:27.05:322,27,0	0/0:8,0:6:11.95:0,12,103	1/1:3,12:12:27.06:342,27,0	1/1:4,6:10:8.62:103,9,0	0/0:18,0:15:33.09:0,33,424	0/0:6,0:4:7.77:0,8,47	0/0:12,0:10:19.48:0,19,163	0/0:15,0:14:23.95:0,24,266	0/0:10,0:9:18.06:0,18,234	1/1:16,0:7:14.55:149,15,0	0/0:34,0:30:15.81:0,16,758	0/0:10,0:9:16.53:0,17,136	0/0:9,0:9:20.56:0,21,155	0/0:15,0:13:20.90:0,21,194	0/0:7,0:6:12.04:0,12,155	0/0:10,0:9:11.98:0,12,117	0/0:12,0:8:17.88:0,18,153	0/0:10,0:8:12.04:0,12,153	1/1:1,4:4:12.04:154,12,0	1/1:19,0:17:9.35:396,9,0	0/1:26,0:15:10.06:245,0,10
chr10	15727385	.	CTCT	C	1284.21	PASS	AB=0.880;AC=41;AF=0.732;AN=56;BaseQRankSum=-0.301;DP=427;FS=6.414;HRun=0;HaplotypeScore=107.2320;InbreedingCoeff=-0.1098;MQ=33.55;MQ0=70;MQRankSum=-0.563;QD=3.15;ReadPosRankSum=2.785;VQSLOD=1.5179;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:14:0.51:31,1,0	1/1:10,0:10:2.83:8,3,0	0/0:10,0:4:9.03:0,9,151	0/0:9,0:6:17.55:0,18,277	1/1:25,0:22:1.41:27,1,0	1/1:16,0:11:16.36:87,16,0	1/1:11,0:8:16.89:96,17,0	1/1:19,0:13:26.59:171,27,0	1/1:14,0:12:2.63:101,3,0	1/1:18,0:14:11.45:73,11,0	1/1:19,0:17:0.21:20,0,0	1/1:12,0:9:11.24:49,11,0	0/1:8,8:14:30.24:68,0,30	0/1:8,5:13:25.11:25,0,29	0/1:15,0:9:23.30:23,0,23	0/1:12,0:10:14.36:14,0,17	0/1:11,0:5:9.89:13,0,10	0/1:9,0:6:0.30:51,0,0	0/1:12,9:13:42.81:94,0,43	0/1:15,0:13:43.86:44,0,73	0/1:9,0:9:10.09:10,0,47	1/1:20,0:15:14.72:79,15,0	0/1:11,13:22:92.04:92,0,157	0/1:14,1:11:2.73:64,0,3	1/1:16,0:14:0.06:61,0,0	1/1:23,0:15:0.87:14,1,0	1/1:13,0:10:4.47:24,4,0	1/1:11,0:9:14.72:93,15,0
chr10	15727394	.	C	CTCT	2664.56	PASS	AB=0.986;AC=27;AF=0.482;AN=56;BaseQRankSum=11.183;DP=432;FS=1.103;HRun=0;HaplotypeScore=110.3795;InbreedingCoeff=-0.5513;MQ=39.75;MQ0=68;MQRankSum=1.503;QD=6.81;ReadPosRankSum=5.748;VQSLOD=2.4592;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:15:30.13:208,0,30	1/1:11,0:11:4.13:200,4,0	0/0:15,0:7:8.82:0,9,153	0/0:10,0:7:21.04:0,21,327	0/1:28,0:26:28.92:123,0,29	0/1:16,0:11:26.61:215,0,27	0/1:8,0:5:23.12:23,0,70	0/1:18,0:12:8.19:8,0,100	0/1:13,0:11:32.03:55,0,32	0/1:16,0:12:92.94:97,0,93	0/1:12,9:20:5.78:54,0,6	0/1:12,0:9:9.78:144,0,10	0/1:17,0:16:40.07:40,0,109	0/1:12,0:12:8.07:8,0,72	0/0:15,0:9:2.65:0,3,127	0/1:11,0:10:93.69:94,0,95	0/1:11,0:5:7.76:8,0,15	0/1:9,0:6:26.98:32,0,27	0/1:21,0:14:67.44:67,0,96	0/1:12,0:10:0.63:60,0,1	0/1:10,0:10:1:1,0,48	0/1:19,0:15:2.08:324,0,2	0/1:22,0:20:92.84:93,0,175	1/1:14,0:10:18.38:88,18,0	0/1:16,0:14:38.19:189,0,38	0/1:26,0:19:47.24:422,0,47	0/1:13,0:10:17.61:112,0,18	0/1:12,0:10:52.49:148,0,52
chr10	15727408	.	C	CTT	1828.60	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=-4.914;DP=385;FS=17.968;HRun=1;HaplotypeScore=117.0086;InbreedingCoeff=0.8792;MQ=47.43;MQ0=26;MQRankSum=4.640;QD=17.58;ReadPosRankSum=1.014;VQSLOD=-0.0574;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:19:34.57:0,35,245	0/0:10,0:10:6.79:0,7,133	0/0:23,0:13:14.05:0,14,398	0/0:12,0:8:18.70:0,19,332	0/0:24,0:23:40.11:0,40,267	0/0:13,0:12:25.58:0,26,161	0/0:6,0:4:8.84:0,9,59	0/0:16,0:12:20.43:0,20,131	1/1:10,1:10:26.61:309,27,0	0/0:11,0:11:27.72:0,28,174	0/0:20,0:18:23.57:0,24,155	0/0:13,0:11:25.71:0,26,166	1/1:15,1:16:6.46:133,6,0	1/1:10,1:11:19.13:157,19,0	0/0:14,0:9:20.43:0,20,125	0/0:12,0:11:29.21:0,29,182	0/0:8,0:7:11.89:0,12,87	0/0:6,0:4:8.92:0,9,61	1/1:18,0:14:24.44:396,24,0	1/1:10,1:10:26.30:262,26,0	0/1:5,0:5:0.73:45,0,1	0/0:16,0:15:41.41:0,41,279	1/1:19,1:19:24.95:389,25,0	1/1:12,0:11:20.12:331,20,0	0/0:12,0:12:26.65:0,27,190	0/0:26,0:22:52.30:0,52,339	0/0:10,0:9:14.69:0,15,106	0/0:7,0:7:14.57:0,15,85
chr10	15727409	.	C	CT	892.34	PASS	AB=0.976;AC=12;AF=0.214;AN=56;BaseQRankSum=-1.377;DP=382;FS=2.773;HRun=1;HaplotypeScore=112.2643;InbreedingCoeff=0.2001;MQ=47.65;MQ0=24;MQRankSum=5.503;QD=6.97;ReadPosRankSum=2.123;VQSLOD=0.9666;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:18:11.15:0,11,193	0/0:10,0:10:16.81:0,17,91	0/0:25,0:14:36:0,36,401	0/0:12,0:8:23.97:0,24,273	0/0:23,0:22:18.94:0,19,198	0/0:12,0:11:21.70:0,22,124	0/0:5,0:3:8.87:0,9,68	0/0:17,0:13:19.50:0,19,132	1/1:10,1:10:14.30:155,14,0	0/0:12,0:12:26.56:0,27,167	0/0:20,0:18:22.81:0,23,122	0/1:13,0:11:46.47:46,0,97	0/1:15,1:16:9.64:63,0,10	0/1:10,1:11:3.01:48,0,3	0/0:13,0:9:20.16:0,20,141	0/0:12,0:11:28.92:0,29,204	0/0:8,0:7:11.69:0,12,70	0/0:5,0:4:8.71:0,9,49	0/1:18,0:14:30.71:201,0,31	1/1:10,1:10:2.08:147,2,0	0/1:5,0:5:8.81:42,0,9	0/0:16,0:15:31.49:0,31,180	0/1:19,1:19:84.47:131,0,84	0/1:13,0:12:0.76:185,0,1	0/0:11,0:11:6.36:0,6,136	0/0:26,0:22:35.35:0,35,277	0/1:10,0:9:26.43:26,0,60	0/0:6,0:6:11.98:0,12,55
chr10	15728046	.	G	GC	13722.30	PASS	AB=1.000;AC=37;AF=0.661;AN=56;BaseQRankSum=-14.123;DP=663;FS=0.651;HRun=6;HaplotypeScore=63.2812;InbreedingCoeff=0.9133;MQ=73.99;MQ0=0;MQRankSum=-1.327;QD=31.47;ReadPosRankSum=0.817;VQSLOD=5.3201;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,40:45:99:1469,117,0	1/1:0,7:7:12.04:151,12,0	0/1:16,0:16:18.54:19,0,101	0/0:15,0:16:17.97:0,18,164	1/1:0,29:29:81.15:981,81,0	1/1:1,20:21:57.18:717,57,0	1/1:1,29:30:84.27:1056,84,0	1/1:7,17:24:53.25:606,53,0	0/0:28,0:28:78.18:0,78,796	1/1:3,25:29:77.69:906,78,0	1/1:3,20:23:54.17:679,54,0	1/1:2,21:24:66.19:804,66,0	0/0:25,0:25:72.14:0,72,725	0/0:22,0:22:60.12:0,60,605	1/1:1,17:18:48.15:604,48,0	1/1:0,19:19:51.16:637,51,0	1/1:3,23:26:66.21:830,66,0	1/1:2,18:20:54.13:662,54,0	0/0:26,0:26:75.17:0,75,765	0/0:26,0:26:60.12:0,60,605	0/0:34,0:34:90.20:0,90,918	1/1:3,20:23:57.18:717,57,0	0/0:20,0:20:54.12:0,54,551	0/0:29,1:30:40.42:0,40,720	1/1:2,16:18:45.14:566,45,0	1/1:1,35:36:99:1338,108,0	1/1:1,21:22:63.20:792,63,0	1/1:1,5:6:15.05:189,15,0
chr10	15728464	.	GGTGTGT	G	3969.14	PASS	AB=0.778;AC=15;AF=0.278;AN=54;BaseQRankSum=4.055;DP=625;FS=27.183;HRun=0;HaplotypeScore=168.6471;InbreedingCoeff=0.6972;MQ=52.86;MQ0=3;MQRankSum=-4.095;QD=21.57;ReadPosRankSum=2.967;VQSLOD=1.5338;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:32:8.35:0,8,227	0/0:4,0:7:6.02:0,6,157	0/0:32,0:21:36.04:0,36,790	0/0:28,0:18:27.09:0,27,760	0/0:11,0:12:2.43:0,2,78	0/0:16,0:23:16.99:0,17,507	0/0:21,0:27:6.02:0,6,157	0/0:32,0:29:60.16:0,60,1601	1/1:5,19:24:54.18:1137,54,0	0/0:21,0:23:66.23:0,66,1832	0/0:9,0:12:0.68:0,1,75	./.	1/1:3,7:11:21.07:423,21,0	1/1:6,15:21:33.11:698,33,0	0/0:19,0:24:5.95:0,6,157	0/0:18,0:23:3.01:0,3,79	0/0:17,0:20:11.43:0,11,314	0/0:21,0:24:21.03:0,21,502	0/1:15,5:21:34.65:298,0,35	1/1:6,11:17:27.09:571,27,0	1/1:32,18:50:14.88:317,15,0	0/0:24,0:26:9.03:0,9,278	1/1:4,9:13:11.31:208,11,0	1/1:13,13:27:15.52:318,16,0	0/0:15,0:17:6.02:0,6,141	0/0:23,0:27:75.23:0,75,1975	0/0:14,0:18:18.53:0,19,472	0/0:4,0:4:9.03:0,9,239
chr10	15728614	.	GCC	G	3126.16	PASS	AC=34;AF=0.630;AN=54;BaseQRankSum=12.224;DP=255;FS=22.693;HRun=2;HaplotypeScore=112.6347;InbreedingCoeff=0.8869;MQ=111.60;MQ0=0;MQRankSum=-11.223;QD=26.72;ReadPosRankSum=5.008;VQSLOD=1.4784;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,17:18:42.09:490,42,0	./.	0/0:14,0:14:39.99:0,40,701	0/0:37,0:37:99:0,105,1880	1/1:1,2:3:6.02:77,6,0	1/1:0,4:6:14.87:169,15,0	1/1:0,14:14:42.08:440,42,0	1/1:0,5:5:15.03:152,15,0	0/0:11,0:11:33.11:0,33,665	1/1:1,5:6:15.02:149,15,0	1/1:1,3:4:9.02:105,9,0	1/1:0,4:4:12.02:117,12,0	0/0:5,0:5:15.05:0,15,302	0/0:5,0:5:12.04:0,12,243	1/1:0,9:9:24.04:257,24,0	1/1:0,9:9:27.06:301,27,0	1/1:1,7:8:21.04:206,21,0	1/1:2,4:5:9.02:111,9,0	0/0:16,0:16:45.15:0,45,869	0/0:5,0:5:15.05:0,15,305	0/0:25,0:25:72.25:0,72,1441	1/1:0,2:3:8.86:111,9,0	0/0:2,0:2:6.02:0,6,122	0/0:17,0:17:36.10:0,36,693	1/1:0,5:5:12.03:138,12,0	1/1:1,4:5:15.03:148,15,0	1/1:1,10:11:33.06:337,33,0	1/1:0,1:1:3:29,3,0
chr10	15728617	.	TAGGTCTCCCTCCTGTG	T	11351.55	PASS	AC=34;AF=0.630;AN=54;BaseQRankSum=11.423;DP=239;FS=25.114;HRun=0;HaplotypeScore=152.5769;InbreedingCoeff=0.8784;MQ=108.84;MQ0=0;MQRankSum=-10.401;QD=104.14;ReadPosRankSum=5.110;VQSLOD=3.0522;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,11:17:45.04:1441,45,0	./.	0/0:13,0:12:35.15:0,35,1416	0/0:34,0:34:98.71:0,99,4182	1/1:0,2:2:5.88:36,6,0	1/1:2,4:6:15.05:502,15,0	1/1:2,12:14:42.14:1589,42,0	1/1:0,5:5:15.05:641,15,0	0/0:11,0:11:33.11:0,33,2082	1/1:0,5:5:15.05:638,15,0	1/1:0,3:3:9.03:369,9,0	1/1:0,4:4:12.04:508,12,0	0/0:5,0:5:15.04:0,15,770	0/0:5,0:5:15.05:0,15,1019	1/1:2,7:9:24.08:916,24,0	1/1:2,7:9:27.09:1010,27,0	1/1:0,7:7:21.07:890,21,0	1/1:2,2:3:9.03:299,9,0	0/0:13,0:13:38.93:0,39,1205	0/0:5,0:5:15.05:0,15,999	0/0:26,0:26:75.26:0,75,5112	1/1:2,1:3:5.39:228,5,0	0/0:2,0:2:6.02:0,6,486	0/0:16,0:16:33.11:0,33,1860	1/1:0,4:5:12:312,12,0	1/1:0,4:4:12.04:512,12,0	1/1:2,9:11:33.11:1335,33,0	1/1:0,1:1:3.01:127,3,0
chr10	15728842	.	AT	A	905.30	PASS	AB=0.787;AC=13;AF=0.241;AN=54;BaseQRankSum=9.182;DP=355;FS=5.786;HRun=1;HaplotypeScore=83.3891;InbreedingCoeff=-0.3686;MQ=69.16;MQ0=0;MQRankSum=-5.047;QD=5.06;ReadPosRankSum=2.851;VQSLOD=0.7514;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:22,6:28:99:152,0,810	0/1:5,2:7:45.26:45,0,195	0/0:21,0:19:51.03:0,51,758	0/0:19,0:18:19.23:0,19,613	0/0:10,0:9:15.05:0,15,239	0/1:7,4:11:99:120,0,300	0/0:20,1:21:12.61:0,13,725	0/0:6,0:6:15.05:0,15,238	0/0:3,0:3:3.01:0,3,43	0/1:11,3:14:37.83:38,0,452	0/1:14,7:21:99:183,0,486	0/0:16,2:18:6.52:0,7,628	./.	0/0:1,0:1:3.01:0,3,48	0/0:24,2:26:7.85:0,8,971	0/1:13,4:17:61.03:61,0,486	0/0:15,1:16:5.31:0,5,587	0/1:19,4:22:97.56:98,0,661	0/0:10,0:10:27.04:0,27,323	0/1:1,1:2:26.30:32,0,26	0/0:9,0:9:18.06:0,18,262	0/1:14,3:17:63.29:63,0,530	0/0:2,0:2:6.02:0,6,95	0/0:14,0:14:10.94:0,11,216	0/1:8,1:9:10.67:11,0,355	0/1:16,4:20:99:122,0,657	0/1:4,2:6:58.10:58,0,150	0/1:2,2:4:38.84:67,0,39
chr10	15728852	.	A	AGGG	778.49	PASS	AB=0.779;AC=11;AF=0.196;AN=56;BaseQRankSum=3.976;DP=416;FS=1.596;HRun=2;HaplotypeScore=114.0138;InbreedingCoeff=0.5295;MQ=54.82;MQ0=1;MQRankSum=-2.293;QD=14.97;ReadPosRankSum=-0.853;VQSLOD=0.2576;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:71.61:0,72,761	0/0:11,0:11:22.71:0,23,236	0/0:15,0:13:22.77:0,23,342	0/0:15,0:15:32.14:0,32,443	0/0:14,0:13:11.54:0,12,200	0/0:14,0:14:21.96:0,22,315	0/0:31,0:31:70.03:0,70,711	0/0:13,0:11:5.98:0,6,138	1/1:2,3:5:8.72:88,9,0	0/0:16,0:16:45.22:0,45,493	0/0:25,0:25:12.78:0,13,548	0/0:22,0:22:55.99:0,56,690	0/0:2,0:2:2.92:0,3,17	0/1:3,0:3:10.09:28,0,10	0/0:29,0:28:61.28:0,61,873	0/0:15,0:15:20.70:0,21,386	0/0:17,0:17:31.83:0,32,572	0/0:24,0:23:29.50:0,30,636	0/1:10,5:14:97.86:328,0,98	1/1:1,1:2:5.93:85,6,0	0/1:3,7:9:5.05:205,0,5	0/0:20,0:20:39.49:0,39,608	1/1:3,0:3:2.96:51,3,0	1/1:3,11:14:11.71:146,12,0	0/0:11,0:11:32.10:0,32,371	0/0:28,0:28:82.07:0,82,998	0/0:8,0:8:23.23:0,23,187	0/0:4,0:4:5.02:0,5,29
chr10	15729235	.	GC	G	7279.42	PASS	AB=0.522;AC=35;AF=0.625;AN=56;BaseQRankSum=3.955;DP=503;FS=3.235;HRun=8;HaplotypeScore=67.8875;InbreedingCoeff=0.9311;MQ=87.89;MQ0=0;MQRankSum=-4.874;QD=22.61;ReadPosRankSum=3.700;VQSLOD=5.6272;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,35:40:87.14:840,87,0	1/1:3,4:7:9.01:87,9,0	0/0:25,0:25:56.68:0,57,639	0/0:24,0:24:15.82:0,16,539	1/1:0,15:15:36.06:348,36,0	1/1:2,14:16:39.06:376,39,0	1/1:3,27:30:75.12:724,75,0	1/1:8,11:19:33.04:318,33,0	0/0:16,0:16:48.15:0,48,577	1/1:3,18:21:54.07:516,54,0	1/1:2,7:9:9.01:87,9,0	1/1:1,10:11:30.05:290,30,0	0/0:15,0:15:42.13:0,42,505	0/0:23,0:23:66.11:0,66,749	1/1:0,8:8:12.02:116,12,0	1/1:0,16:16:45.07:435,45,0	1/1:2,21:23:54.09:521,54,0	1/1:2,24:26:63.08:604,63,0	0/0:15,0:15:30.09:0,30,361	0/0:4,0:4:12.03:0,12,139	0/0:36,0:36:90.27:0,90,1083	1/1:1,12:13:36.05:346,36,0	0/0:7,0:7:18.05:0,18,210	0/0:16,0:16:42.13:0,42,507	1/1:1,10:11:24.04:232,24,0	1/1:3,25:28:75.12:724,75,0	1/1:2,15:17:45.07:435,45,0	0/1:1,11:12:0.18:282,0,0
chr10	15729576	.	T	TCGGCGCGATCC	13976.39	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-5.802;DP=619;FS=0.000;HRun=0;HaplotypeScore=184.5119;InbreedingCoeff=0.9849;MQ=67.43;MQ0=0;MQRankSum=-14.232;QD=83.19;ReadPosRankSum=1.181;VQSLOD=4.6957;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:21,18:43:64.46:3450,64,0	0/0:11,0:11:27.09:0,27,880	0/0:17,0:17:34.69:0,35,1014	0/0:20,0:20:48.16:0,48,1446	0/0:15,0:15:33.11:0,33,1005	0/0:25,0:25:69.22:0,69,2237	0/0:16,0:16:27.09:0,27,878	0/0:31,0:31:66.21:0,66,2005	0/0:28,0:28:66.18:0,66,1930	0/0:21,0:21:48.14:0,48,1447	0/0:11,0:11:21.07:0,21,705	1/1:15,12:28:48.16:2359,48,0	0/0:17,0:17:33.11:0,33,1108	0/0:25,0:25:51.16:0,51,1556	1/1:12,13:28:48.12:2408,48,0	1/1:9,9:19:30.10:1632,30,0	0/0:33,0:33:90.31:0,90,2941	1/1:8,12:22:39.13:2092,39,0	0/0:26,0:26:57.20:0,57,1866	0/0:8,0:8:18.06:0,18,579	0/0:43,0:43:96.33:0,96,3040	1/1:7,2:11:8.99:307,9,0	0/0:8,0:8:18.06:0,18,605	0/0:36,0:35:99:0,105,3473	1/1:10,7:17:33.11:1729,33,0	0/0:34,0:34:90.30:0,90,2900	0/0:13,0:13:36.11:0,36,1104	0/0:12,0:12:36.12:0,36,1128
chr10	15729824	.	G	GT	5825.01	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-13.608;DP=621;FS=12.256;HRun=6;HaplotypeScore=60.4252;InbreedingCoeff=0.9985;MQ=68.87;MQ0=0;MQRankSum=-1.506;QD=33.48;ReadPosRankSum=0.247;VQSLOD=4.0266;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,144,1467	0/0:7,0:7:18.04:0,18,184	0/0:15,0:15:33.06:0,33,331	0/0:18,0:18:41.94:0,42,400	0/0:20,0:20:60.13:0,60,611	0/0:16,0:16:48.09:0,48,482	0/0:14,0:14:39.09:0,39,398	0/0:27,0:27:69.02:0,69,699	1/1:5,16:21:42.13:529,42,0	0/0:24,0:24:69.15:0,69,704	0/0:17,0:17:48.11:0,48,489	0/0:26,0:26:75.17:0,75,765	1/1:1,16:17:48.15:601,48,0	1/1:0,23:23:63.20:793,63,0	0/0:23,0:23:69.16:0,69,704	0/0:22,0:22:60.14:0,60,612	0/0:37,0:37:99:0,102,1033	0/0:13,0:13:39.09:0,39,398	1/1:1,18:19:54.17:678,54,0	1/1:0,13:13:36.05:433,36,0	1/1:3,28:30:81.26:1018,81,0	0/0:25,0:25:66.15:0,66,673	1/1:0,23:23:63.20:793,63,0	1/1:0,27:27:78.25:981,78,0	0/0:26,0:26:69.14:0,69,697	0/0:29,0:29:84.19:0,84,857	0/0:20,0:19:54.12:0,54,550	0/0:17,0:17:51.12:0,51,520
chr10	15730044	.	AT	A	15662.26	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=7.705;DP=671;FS=3.478;HRun=2;HaplotypeScore=114.9446;InbreedingCoeff=0.9996;MQ=101.78;MQ0=1;MQRankSum=-5.971;QD=37.03;ReadPosRankSum=3.974;VQSLOD=4.6167;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,53:53:99:2025,157,0	1/1:0,9:9:24.08:312,24,0	0/0:49,0:48:92.21:0,92,1442	0/0:47,0:44:51.43:0,51,1102	1/1:0,23:23:66.21:857,66,0	1/1:0,24:24:66.21:857,66,0	1/1:0,28:28:75.24:974,75,0	1/1:1,26:27:78.25:1013,78,0	0/0:18,0:18:54.17:0,54,789	1/1:0,25:25:75.24:974,75,0	1/1:0,21:21:56.86:735,57,0	1/1:1,19:20:57.19:740,57,0	0/0:14,0:14:42.14:0,42,628	0/0:13,0:13:39.13:0,39,584	1/1:0,19:19:54.18:701,54,0	1/1:0,19:19:57.19:740,57,0	1/1:0,34:34:93.30:1207,93,0	1/1:1,19:20:51.17:661,51,0	0/0:15,0:15:45.12:0,45,617	0/0:16,0:16:48.16:0,48,719	0/0:29,0:29:72.77:0,73,1203	1/1:0,21:21:63.20:818,63,0	0/0:13,0:13:39.12:0,39,565	0/0:33,0:33:99:0,99,1459	1/1:0,18:18:51.17:662,51,0	1/1:0,21:21:63.18:791,63,0	1/1:0,31:31:93.30:1207,93,0	1/1:0,10:10:30.10:389,30,0
chr10	15731812	.	A	AAGAGAGAGAGAGAG	11750.06	PASS	AB=1.000;AC=51;AF=0.911;AN=56;BaseQRankSum=-3.072;DP=663;FS=0.000;HRun=0;HaplotypeScore=234.9634;InbreedingCoeff=0.3811;MQ=57.48;MQ0=16;MQRankSum=-1.249;QD=20.65;ReadPosRankSum=2.612;VQSLOD=2.9115;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:32,0:30:10.46:444,10,0	0/0:8,0:8:1.24:0,1,3	0/1:53,0:21:0.47:0,0,331	0/0:84,0:36:3.44:0,3,158	1/1:20,0:17:2.68:97,3,0	1/1:19,0:19:21.06:740,21,0	1/1:25,0:24:15.52:427,16,0	1/1:33,0:31:67.63:1330,68,0	1/1:18,0:16:12.04:387,12,0	1/1:19,0:17:31.30:976,31,0	1/1:9,0:9:2.84:23,3,0	1/1:21,0:21:14.74:325,15,0	1/1:19,0:17:25.31:612,25,0	1/1:14,0:13:9.01:314,9,0	1/1:18,0:18:3.01:113,3,0	1/1:33,0:32:54.08:1749,54,0	1/1:23,0:22:33.42:863,33,0	1/1:15,0:14:17.96:347,18,0	1/1:10,0:8:15.05:476,15,0	1/1:19,0:18:11.66:233,12,0	1/1:14,0:14:5.66:47,6,0	1/1:11,0:9:8.98:154,9,0	1/1:16,0:14:3.01:68,3,0	1/1:27,0:26:9.55:120,10,0	1/1:32,0:30:12.48:215,12,0	1/1:29,0:27:39.13:1116,39,0	1/1:15,8:31:3.01:201,3,0	1/1:9,0:9:18.04:374,18,0
chr10	15731835	.	A	AGAGAGAGAGAGAGAGAGAGG	10890.79	PASS	AB=1.000;AC=31;AF=0.554;AN=56;BaseQRankSum=2.001;DP=660;FS=0.443;HRun=0;HaplotypeScore=259.8411;InbreedingCoeff=-0.1613;MQ=56.76;MQ0=18;MQRankSum=-5.584;QD=21.02;ReadPosRankSum=2.505;VQSLOD=3.5762;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:33:20.81:711,21,0	0/0:3,0:3:3:0,3,25	0/1:70,0:23:13.53:14,0,648	0/0:99,0:36:28.96:0,29,483	0/1:18,0:15:63.32:63,0,83	1/1:16,0:16:8.06:185,8,0	0/1:23,0:23:91.20:290,0,91	0/1:34,0:32:55.09:1119,0,55	0/1:20,0:18:99:173,0,159	0/1:16,0:15:76.90:458,0,77	0/0:12,0:12:8.78:0,9,76	1/1:22,0:22:37.91:899,38,0	0/1:17,0:16:10.93:652,0,11	0/0:13,0:12:6.42:0,6,45	1/1:1,10:26:3.90:198,4,0	1/1:31,0:30:72.21:2329,72,0	0/1:20,0:19:74.51:300,0,75	1/1:13,0:12:22.83:747,23,0	0/1:16,0:15:99:569,0,133	0/1:16,0:16:56.31:56,0,57	0/0:15,0:15:15.27:0,15,119	1/1:5,0:4:12.01:227,12,0	0/1:13,0:11:32.56:33,0,34	0/1:24,0:24:58.74:59,0,81	1/1:22,0:20:36.32:344,36,0	0/1:23,0:21:59.66:879,0,60	0/1:16,0:16:97.74:110,0,98	0/1:16,0:16:99:477,0,186
chr10	15732137	.	CCTCTCTCTCTCTCTCTCTCT	C	4648.35	PASS	AC=12;AF=0.222;AN=54;BaseQRankSum=6.479;DP=486;FS=4.147;HRun=0;HaplotypeScore=210.4422;InbreedingCoeff=0.8456;MQ=63.90;MQ0=16;MQRankSum=-5.624;QD=48.42;ReadPosRankSum=2.459;VQSLOD=3.9527;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:15,3:17:21.48:443,21,0	0/0:4,0:5:14.41:0,14,586	0/0:39,0:20:16.41:0,16,510	0/0:33,0:14:5.83:0,6,172	0/0:17,0:17:30.09:0,30,982	0/0:22,0:22:39.13:0,39,2225	0/0:13,0:16:33.10:0,33,1407	0/0:37,0:36:24.08:0,24,663	0/0:12,0:14:27.09:0,27,903	0/0:12,0:14:21.07:0,21,1193	0/0:14,0:14:24.05:0,24,1291	1/1:5,8:13:18.06:964,18,0	0/0:2,0:5:6.02:0,6,281	0/0:5,0:5:3:0,3,25	1/1:5,15:20:30.57:1608,31,0	1/1:4,10:15:9.03:461,9,0	0/0:25,0:25:42.14:0,42,2444	1/1:8,10:19:9.03:461,9,0	0/0:15,0:17:24.04:0,24,691	0/0:4,0:3:1.25:0,1,3	0/0:21,0:26:18.05:0,18,416	./.	0/0:4,0:7:9.03:0,9,273	0/0:14,0:28:30.09:0,30,1119	1/1:4,6:11:15.05:711,15,0	0/0:19,0:19:35.15:0,35,1781	0/0:15,0:14:30.10:0,30,1891	0/0:19,0:20:29.13:0,29,1365
chr10	15734749	.	GA	G	12245.62	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=12.567;DP=596;FS=1.450;HRun=1;HaplotypeScore=58.2626;InbreedingCoeff=0.9850;MQ=89.16;MQ0=0;MQRankSum=-2.727;QD=37.56;ReadPosRankSum=3.438;VQSLOD=5.3477;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,40:41:96.30:1319,96,0	0/0:7,0:7:21.07:0,21,328	0/0:22,0:22:66.20:0,66,964	0/0:22,1:23:30.61:0,31,740	0/0:24,0:24:72.23:0,72,1076	0/0:11,0:11:33.08:0,33,470	0/0:19,0:19:57.18:0,57,857	0/0:31,0:31:87.27:0,87,1288	1/1:0,16:16:48.16:671,48,0	0/0:20,0:20:60.20:0,60,924	0/0:16,0:16:45.14:0,45,681	1/1:0,17:17:45.15:629,45,0	1/1:0,14:14:39.13:545,39,0	1/1:0,16:16:42.14:587,42,0	1/1:0,31:31:84.28:1174,84,0	1/1:0,17:17:45.15:624,45,0	0/0:28,0:28:84.25:0,84,1264	1/1:0,21:21:60.20:838,60,0	1/1:0,18:18:54.17:735,54,0	1/1:2,16:18:54.15:715,54,0	1/1:0,37:37:99:1426,102,0	1/1:0,14:14:39.13:544,39,0	1/1:0,3:3:6.02:84,6,0	1/1:0,43:43:99:1552,111,0	1/1:3,17:20:60.18:802,60,0	0/0:19,0:19:57.19:0,57,892	0/0:25,0:25:75.24:0,75,1137	0/0:25,0:25:72.24:0,72,1099
chr10	15734907	.	C	CT	2313.40	PASS	AB=1.000;AC=24;AF=0.429;AN=56;BaseQRankSum=-8.836;DP=479;FS=3.214;HRun=8;HaplotypeScore=85.4331;InbreedingCoeff=0.8383;MQ=72.20;MQ0=2;MQRankSum=1.286;QD=12.37;ReadPosRankSum=-3.756;VQSLOD=2.6526;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:85.90:0,86,594	1/1:3,1:4:8.97:79,9,0	0/1:20,0:13:15.25:15,0,62	0/1:21,0:14:11.59:20,0,12	1/1:19,0:19:32.78:244,33,0	1/1:2,14:16:39.12:450,39,0	1/1:3,7:10:21.06:241,21,0	1/1:20,1:21:31.50:255,31,0	0/0:10,0:10:29.31:0,29,180	1/1:20,0:20:44.34:370,44,0	1/1:8,0:8:14.84:102,15,0	0/0:11,0:11:17.55:0,18,104	0/0:15,0:15:35.14:0,35,212	0/0:10,0:10:17.56:0,18,104	0/0:18,0:18:41.06:0,41,254	0/0:23,0:23:49.85:0,50,308	1/1:11,0:11:20.97:181,21,0	0/0:37,0:37:57.24:0,57,462	0/0:13,0:13:29.45:0,29,195	0/0:17,0:17:46.98:0,47,289	0/0:26,0:26:52.75:0,53,323	0/0:14,0:14:38.21:0,38,243	0/0:16,0:16:32.21:0,32,196	0/0:21,0:21:40.93:0,41,242	0/0:21,0:21:40.79:0,41,247	1/1:13,1:14:26.95:225,27,0	1/1:16,2:18:32.64:285,33,0	1/1:5,0:5:8.93:67,9,0
chr10	15734915	.	TG	T	5180.58	PASS	AB=1.000;AC=32;AF=0.571;AN=56;BaseQRankSum=-9.708;DP=478;FS=10.001;HRun=10;HaplotypeScore=76.2958;InbreedingCoeff=0.8293;MQ=68.23;MQ0=10;MQRankSum=3.865;QD=15.99;ReadPosRankSum=5.218;VQSLOD=4.5263;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,34:41:84.95:772,85,0	0/0:3,0:4:8.72:0,9,53	0/1:18,0:11:6.62:7,0,57	0/1:17,0:10:6.69:12,0,7	0/0:4,0:20:22.75:0,23,130	0/0:17,0:16:41.77:0,42,306	0/0:8,0:8:20.89:0,21,162	0/0:5,0:22:34.41:0,34,218	1/1:1,10:11:26.99:234,27,0	0/0:0,0:19:20.04:0,20,118	0/0:0,0:10:5.80:0,6,44	1/1:0,13:13:17.97:156,18,0	1/1:2,11:14:32.03:266,32,0	1/1:1,7:8:18:156,18,0	1/1:3,16:18:35.99:312,36,0	1/1:3,17:20:44.99:390,45,0	0/0:2,0:10:19.81:0,20,102	1/1:6,29:35:63.24:641,63,0	1/1:6,8:14:4.38:166,4,0	1/1:2,15:17:41.92:351,42,0	1/1:3,18:20:50.86:431,51,0	1/1:4,14:17:35.80:293,36,0	1/1:3,17:20:38.88:320,39,0	1/1:1,19:20:41.99:364,42,0	1/1:4,14:17:35.99:311,36,0	0/0:4,0:13:20.48:0,20,141	0/0:3,0:19:30.91:0,31,153	0/0:2,0:8:11.50:0,12,64
chr10	15736820	.	C	CCTAGGCCTTAACCTCCCAT	98535.67	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-5.793;DP=759;FS=7.500;HRun=0;HaplotypeScore=274.0967;InbreedingCoeff=0.9892;MQ=63.64;MQ0=0;MQRankSum=-8.408;QD=138.20;ReadPosRankSum=5.495;VQSLOD=3.2440;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,17:32:51.18:4039,51,0	1/1:7,5:15:26.67:1891,27,0	0/0:20,0:20:38.96:0,39,1142	0/0:26,0:25:48.16:0,48,1781	1/1:14,18:37:60.12:3983,60,0	1/1:8,13:23:42.14:2961,42,0	1/1:29,0:29:78.21:3992,78,0	1/1:39,0:38:84.28:4664,84,0	1/1:14,13:33:54.19:3640,54,0	1/1:12,20:36:93.29:6434,93,0	1/1:3,7:16:15.05:1103,15,0	1/1:20,16:41:78.02:5731,78,0	1/1:19,16:40:87.30:6257,87,0	1/1:15,15:34:72.25:5481,72,0	1/1:10,18:32:69.24:5536,69,0	1/1:23,17:47:93.32:6465,93,0	1/1:9,8:20:36.12:2469,36,0	1/1:11,6:18:33.11:2154,33,0	1/1:21,3:25:60.19:3478,60,0	1/1:11,4:16:27.09:1502,27,0	1/1:15,2:19:24.08:1581,24,0	1/1:11,17:28:63.22:5115,63,0	1/1:6,16:23:39.13:3048,39,0	1/1:11,3:19:30.10:2084,30,0	1/1:10,12:22:45.11:2726,45,0	1/1:8,11:22:63.21:3969,63,0	1/1:15,13:31:69.10:5345,69,0	1/1:7,6:14:36.12:2889,36,0
chr10	15738375	.	CCCCCCCCCCG	C	3689.59	PASS	AC=22;AF=0.458;AN=48;BaseQRankSum=4.988;DP=189;FS=26.419;HRun=0;HaplotypeScore=68.7270;InbreedingCoeff=0.7772;MQ=62.62;MQ0=1;MQRankSum=-6.461;QD=34.81;ReadPosRankSum=3.753;VQSLOD=1.5941;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:6:14.35:0,14,347	1/1:0,3:3:9.03:265,9,0	0/0:8,0:4:11.93:0,12,176	0/0:10,0:8:15.47:0,15,196	1/1:3,2:5:0.42:1,0,0	1/1:4,2:6:2.87:56,3,0	1/1:10,13:20:32.81:808,33,0	1/1:0,7:6:17.71:152,18,0	0/0:3,0:3:3.01:0,3,103	1/1:6,3:9:14.80:309,15,0	1/1:5,0:5:8.26:34,8,0	0/0:8,0:8:8.96:0,9,179	0/0:3,0:3:6.02:0,6,249	./.	0/0:3,0:3:9.03:0,9,227	0/0:3,0:3:6.02:0,6,154	1/1:6,9:14:14.83:374,15,0	0/0:11,0:11:21.07:0,21,464	./.	./.	0/0:5,0:5:8.95:0,9,215	0/0:11,0:11:16.87:0,17,306	0/0:2,0:2:0.89:0,1,2	./.	0/0:5,0:5:15.05:0,15,412	1/1:5,3:8:11.82:282,12,0	1/1:7,11:16:29.89:877,30,0	1/1:0,7:7:18.06:531,18,0
chr10	15738444	.	C	CT	6983.56	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-7.411;DP=397;FS=72.744;HRun=3;HaplotypeScore=55.3738;InbreedingCoeff=0.9797;MQ=76.75;MQ0=1;MQRankSum=-3.490;QD=35.27;ReadPosRankSum=0.505;VQSLOD=-0.6106;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:72.22:0,72,863	1/1:0,11:11:30.10:420,30,0	0/0:13,0:11:23.23:0,23,243	0/0:22,0:22:46.43:0,46,509	1/1:0,15:15:45.11:599,45,0	1/1:3,12:15:33.11:462,33,0	1/1:5,13:19:42.09:549,42,0	1/1:4,25:29:75.24:1031,75,0	0/0:7,0:7:18.05:0,18,216	1/1:1,23:24:66.20:905,66,0	1/1:0,14:14:36.12:502,36,0	0/0:9,0:9:27.08:0,27,324	0/0:8,0:8:24.07:0,24,288	0/0:12,0:12:33.10:0,33,396	0/0:4,0:4:12.04:0,12,144	0/0:5,0:5:15.05:0,15,180	1/1:2,21:23:63.21:881,63,0	0/0:10,0:10:27.04:0,27,306	0/0:6,0:6:17.99:0,18,189	0/0:7,0:7:15.05:0,15,180	0/0:20,0:20:60.17:0,60,708	0/0:6,0:6:18.06:0,18,216	0/0:5,0:5:15.04:0,15,177	0/0:28,0:28:84.23:0,84,983	0/0:10,0:10:27.08:0,27,324	1/1:1,22:23:66.22:924,66,0	1/1:1,17:15:39.13:542,39,0	1/1:3,4:7:12.04:168,12,0
chr10	15738583	.	TACACACACACACACACACAC	T	2209.99	PASS	AC=16;AF=0.308;AN=52;BaseQRankSum=5.211;DP=534;FS=17.523;HRun=0;HaplotypeScore=257.9161;InbreedingCoeff=0.8096;MQ=57.62;MQ0=12;MQRankSum=-5.556;QD=15.67;ReadPosRankSum=0.199;VQSLOD=1.1195;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:21.07:0,21,1037	0/0:8,0:9:15.03:0,15,582	./.	0/0:29,0:18:0.47:0,0,1	0/0:21,0:20:33.10:0,33,874	0/0:17,0:18:21.07:0,21,552	0/0:14,0:14:9.02:0,9,181	0/0:30,0:29:29.06:0,29,552	1/1:8,9:17:12.04:536,12,0	0/0:27,0:27:45.03:0,45,1192	0/0:23,0:24:24.08:0,24,785	0/0:7,0:6:6.02:0,6,420	1/1:12,8:20:9.03:465,9,0	1/1:6,6:14:12.04:441,12,0	0/0:13,0:20:21.05:0,21,1111	0/0:11,0:10:15.05:0,15,799	0/0:26,0:31:24.08:0,24,522	0/0:14,0:21:21.07:0,21,1193	1/1:13,3:16:6.02:201,6,0	1/1:10,6:17:12.02:332,12,0	1/1:22,0:18:3.01:47,3,0	0/0:14,0:14:24.08:0,24,1329	1/1:8,0:9:3.01:62,3,0	1/1:15,9:26:6.02:299,6,0	0/0:20,0:20:30.10:0,30,1986	0/0:14,0:20:35.64:0,36,833	0/0:23,0:24:30:0,30,634	./.
chr10	15738827	.	GCACACACACACACA	G	2529.45	PASS	AB=0.708;AC=27;AF=0.711;AN=38;BaseQRankSum=2.397;DP=617;FS=3.615;HRun=0;HaplotypeScore=237.5037;InbreedingCoeff=0.3980;MQ=65.28;MQ0=13;MQRankSum=-1.464;QD=7.51;ReadPosRankSum=-3.029;VQSLOD=1.9121;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:7.67:0,8,145	1/1:6,5:11:2.58:115,3,0	./.	0/0:34,0:22:0:0,0,0	1/1:14,14:28:2.97:20,3,0	1/1:13,15:28:8.95:260,9,0	1/1:20,0:20:1.69:133,2,0	1/1:35,0:32:6.10:128,6,0	./.	1/1:34,0:34:12.08:429,12,0	1/1:23,3:25:22.73:613,23,0	0/1:11,0:21:3.74:4,0,78	./.	./.	1/1:18,0:22:13.57:75,14,0	1/1:14,0:19:8.89:93,9,0	0/0:13,11:24:4.74:0,5,21	0/0:22,0:22:29.98:0,30,360	./.	./.	./.	1/1:16,0:17:5.68:138,6,0	./.	./.	0/1:11,0:19:0.20:25,0,0	1/1:23,0:23:17.88:257,18,0	0/1:15,7:23:2.38:305,0,2	1/1:9,0:9:3.01:56,3,0
chr10	15738890	.	GAC	G	772.58	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=2.524;DP=632;FS=4.522;HRun=0;HaplotypeScore=117.1637;InbreedingCoeff=0.7800;MQ=58.22;MQ0=34;MQRankSum=0.567;QD=5.64;ReadPosRankSum=-0.791;VQSLOD=2.6308;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:30:51.17:0,51,844	0/0:13,0:13:23.29:0,23,355	0/0:31,0:16:43.81:0,44,627	0/0:36,0:22:47.79:0,48,670	0/0:30,0:29:12.99:0,13,757	0/0:26,0:25:33.11:0,33,523	0/0:35,0:33:81.28:0,81,1346	0/0:34,0:32:84.27:0,84,1314	1/1:2,11:11:3.01:38,3,0	0/0:28,1:27:31.03:0,31,1061	0/0:27,0:25:42.12:0,42,637	0/0:22,0:22:39.13:0,39,604	1/1:0,13:12:9.03:108,9,0	1/1:1,3:4:3.01:38,3,0	0/0:22,2:24:18.84:0,19,796	0/0:17,0:15:36.10:0,36,525	0/0:34,0:34:57.63:0,58,911	0/0:24,1:25:15.99:0,16,747	1/1:5,7:11:20.59:248,21,0	1/1:4,10:11:12.04:153,12,0	1/1:9,18:20:18.06:229,18,0	0/0:21,0:20:39.13:0,39,652	1/1:1,6:6:3.01:38,3,0	1/1:3,18:19:6.02:77,6,0	0/1:26,0:24:26.92:27,0,615	0/0:28,0:26:69.23:0,69,1128	0/0:19,0:19:34.65:0,35,498	0/0:11,0:11:33.11:0,33,541
chr10	15740514	.	CT	C	1438.91	PASS	AC=16;AF=0.296;AN=54;BaseQRankSum=9.334;DP=476;FS=9.787;HRun=3;HaplotypeScore=53.2721;InbreedingCoeff=0.8445;MQ=47.52;MQ0=42;MQRankSum=-1.500;QD=12.73;ReadPosRankSum=-0.521;VQSLOD=1.0027;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:29:3.78:0,4,69	0/0:2,0:2:6.02:0,6,86	0/0:5,0:2:5.93:0,6,59	./.	0/0:19,0:18:48.04:0,48,627	0/0:27,1:24:28.63:0,29,681	0/0:14,0:10:14.06:0,14,213	0/0:25,0:16:48:0,48,573	1/1:16,0:14:20.98:176,21,0	0/0:20,0:17:43.65:0,44,568	0/0:23,0:20:38.95:0,39,483	0/0:11,0:10:4.23:0,4,19	1/1:7,0:2:5.99:49,6,0	1/1:14,1:13:35.67:292,36,0	0/0:16,0:14:16.88:0,17,107	0/0:8,0:7:10.05:0,10,74	0/0:32,0:27:58.38:0,58,766	0/0:31,0:24:23.24:0,23,158	1/1:22,2:17:44.85:377,45,0	1/1:16,1:16:32.88:268,33,0	1/1:10,0:5:6:51,6,0	0/0:5,0:5:4.19:0,4,14	1/1:11,0:10:21:179,21,0	1/1:13,0:13:29.88:238,30,0	0/0:27,0:25:33.72:0,34,106	0/0:22,0:20:53.50:0,54,634	0/0:24,0:22:56.05:0,56,738	0/0:15,0:14:36.59:0,37,514
chr10	15740516	.	TTA	T	2488.37	PASS	AC=16;AF=0.296;AN=54;BaseQRankSum=2.187;DP=484;FS=2.329;HRun=0;HaplotypeScore=56.5708;InbreedingCoeff=0.8499;MQ=48.17;MQ0=40;MQRankSum=0.317;QD=22.42;ReadPosRankSum=-0.610;VQSLOD=3.1351;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:29:53.68:0,54,423	0/0:2,0:2:6.02:0,6,120	0/0:5,0:2:6.01:0,6,85	./.	0/0:20,0:19:54.05:0,54,901	0/0:29,0:25:63.67:0,64,1100	0/0:13,0:10:22.27:0,22,330	0/0:25,0:16:48.09:0,48,797	1/1:1,15:14:21.07:329,21,0	0/0:22,0:19:49.29:0,49,816	0/0:24,0:21:44.95:0,45,707	0/0:10,0:9:20.80:0,21,145	1/1:5,3:3:5.96:92,6,0	1/1:5,10:13:33.63:452,34,0	0/0:17,1:16:2.69:0,3,232	0/0:7,0:6:11.93:0,12,121	0/0:33,0:28:66.02:0,66,1116	0/0:32,0:25:59.13:0,59,455	1/1:10,11:15:40.33:495,40,0	1/1:3,15:17:32.92:465,33,0	1/1:5,5:5:6.02:95,6,0	0/0:6,0:6:0.02:0,0,86	1/1:0,10:10:21.07:317,21,0	1/1:2,10:12:30.02:435,30,0	0/0:26,0:26:65.46:0,65,462	0/0:23,0:21:62.81:0,63,937	0/0:25,0:23:63.05:0,63,1059	0/0:15,0:14:39.10:0,39,737
chr10	15740517	.	TA	T	2065.02	PASS	AB=0.700;AC=29;AF=0.537;AN=54;BaseQRankSum=9.854;DP=487;FS=1.387;HRun=13;HaplotypeScore=53.2496;InbreedingCoeff=0.8310;MQ=48.18;MQ0=38;MQRankSum=0.057;QD=8.39;ReadPosRankSum=2.900;VQSLOD=2.4883;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,24:29:58.68:421,59,0	0/0:2,0:2:6.01:0,6,58	0/0:5,0:2:6:0,6,53	./.	0/0:20,0:19:48.01:0,48,447	0/0:27,0:24:38.10:0,38,482	0/0:13,0:11:18.42:0,18,144	0/0:26,0:16:36.01:0,36,337	1/1:16,0:14:18.48:73,18,0	0/0:22,0:19:43.31:0,43,406	0/0:23,1:22:36.04:0,36,342	1/1:2,8:9:20.88:153,21,0	1/1:9,0:4:5.14:20,5,0	1/1:15,0:13:29.72:131,30,0	1/1:5,12:15:3.41:175,3,0	0/1:4,3:6:20.20:35,0,20	0/0:33,1:29:38.63:0,39,522	1/1:12,18:24:18.54:299,19,0	1/1:22,0:16:27.66:105,28,0	1/1:18,0:17:24.04:97,24,0	1/1:10,0:5:5.36:21,5,0	1/1:0,6:6:17.86:127,18,0	1/1:11,0:10:18.29:71,18,0	1/1:12,0:12:23.41:90,23,0	1/1:5,23:26:62.64:460,63,0	0/0:24,0:22:48.18:0,48,503	0/0:24,1:23:32.12:0,32,456	0/0:15,1:15:17.16:0,17,328
chr10	15741619	.	GTCTCTC	G	350.57	PASS	AB=0.985;AC=12;AF=0.250;AN=48;BaseQRankSum=1.940;DP=527;FS=14.334;HRun=0;HaplotypeScore=114.1231;InbreedingCoeff=0.4585;MQ=73.30;MQ0=9;MQRankSum=-0.634;QD=2.85;ReadPosRankSum=1.278;VQSLOD=1.5998;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:29:14.46:205,14,0	0/1:12,0:12:5.06:5,0,286	./.	./.	0/0:21,0:22:21.04:0,21,387	0/0:15,0:15:21.07:0,21,544	0/0:24,0:24:30.09:0,30,765	0/0:37,0:37:2.03:0,2,5	0/0:14,0:18:9.03:0,9,267	0/0:19,0:19:27.09:0,27,762	0/0:17,0:17:15.05:0,15,394	./.	0/0:13,0:11:6.02:0,6,156	0/0:11,0:11:0.29:0,0,68	1/1:10,3:13:6.02:99,6,0	1/1:9,0:8:3:25,3,0	0/0:25,0:25:36.09:0,36,879	1/1:9,3:13:6.02:102,6,0	0/0:21,0:20:12.03:0,12,290	0/0:16,0:16:2.98:0,3,92	0/0:22,0:22:6.02:0,6,159	./.	0/0:19,0:19:6.01:0,6,65	0/1:31,0:32:17.50:17,0,767	1/1:14,0:14:3.01:37,3,0	0/0:14,0:14:9.03:0,9,196	0/0:19,0:17:9.49:0,9,269	0/0:10,0:9:6.02:0,6,124
chr10	15743890	.	A	ACACACATG	21610.18	PASS	AB=0.641;AC=45;AF=0.804;AN=56;BaseQRankSum=-5.920;DP=1187;FS=5.928;HRun=0;HaplotypeScore=327.6356;InbreedingCoeff=0.4650;MQ=48.24;MQ0=7;MQRankSum=-0.229;QD=19.97;ReadPosRankSum=5.528;VQSLOD=2.8009;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:23,31:56:17.78:854,18,0	1/1:6,10:20:15.05:611,15,0	0/0:26,0:15:2.80:0,3,53	0/0:39,0:25:28.87:0,29,446	0/1:9,12:21:0:0,0,0	1/1:9,20:29:18.06:734,18,0	1/1:22,34:61:18.06:737,18,0	1/1:52,0:46:46.95:869,47,0	1/1:15,38:57:53.21:2179,53,0	1/1:22,31:56:68.96:2126,69,0	0/0:11,8:20:0.68:0,1,2	1/1:22,35:61:41.17:1718,41,0	1/1:14,33:49:31.60:1301,32,0	1/1:19,32:56:31.60:1346,32,0	1/1:17,36:59:33.04:1347,33,0	1/1:23,26:49:30.07:1227,30,0	0/1:19,15:34:7.80:186,0,8	1/1:18,13:32:1.37:723,1,0	1/1:14,10:27:43.70:1288,44,0	1/1:11,15:28:3.41:239,3,0	1/1:74,56:143:3.95:240,4,0	0/1:11,21:33:3.40:112,0,3	0/0:5,12:20:1.69:0,2,4	1/1:28,30:60:5.42:159,5,0	1/1:10,8:19:9.03:366,9,0	1/1:7,21:33:60.03:1904,60,0	1/1:13,19:33:29.13:1203,29,0	1/1:10,0:10:8.89:138,9,0
chr10	15744211	.	CTGTCT	C	2360.34	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=7.724;DP=612;FS=4.256;HRun=0;HaplotypeScore=70.7045;InbreedingCoeff=0.8621;MQ=35.40;MQ0=137;MQRankSum=-0.151;QD=14.94;ReadPosRankSum=2.295;VQSLOD=2.1511;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,25:21:33.58:736,34,0	0/0:14,0:9:27.09:0,27,871	0/0:3,0:2:3.01:0,3,90	0/0:2,0:1:3.01:0,3,96	0/0:24,0:15:30.06:0,30,835	0/0:24,0:16:27.09:0,27,816	0/0:26,0:18:51.09:0,51,1492	0/0:45,0:41:99:0,123,3714	0/0:23,0:14:21.04:0,21,594	0/0:21,0:17:45.15:0,45,1433	0/0:20,0:15:42.10:0,42,1271	1/1:10,10:7:12.04:268,12,0	0/0:20,0:11:33.11:0,33,1064	0/0:21,0:14:30.10:0,30,967	1/1:10,8:7:9.03:201,9,0	1/1:15,9:6:6.02:134,6,0	0/0:40,0:28:69.24:0,69,2194	1/1:15,13:11:24.08:535,24,0	0/0:31,0:27:69.24:0,69,2134	0/0:28,0:21:42.11:0,42,1256	0/0:24,0:13:18.53:0,19,581	1/1:5,3:3:3.01:67,3,0	0/0:17,0:10:18.06:0,18,580	0/0:18,0:10:18.06:0,18,544	1/1:7,16:17:27.09:601,27,0	0/0:24,0:19:51.18:0,51,1641	0/0:18,0:16:39.06:0,39,1106	0/0:11,0:8:18.06:0,18,570
chr10	15744370	.	C	CT	1460.78	PASS	AB=0.801;AC=17;AF=0.304;AN=56;BaseQRankSum=-1.913;DP=435;FS=1.667;HRun=11;HaplotypeScore=88.1713;InbreedingCoeff=0.2321;MQ=68.01;MQ0=0;MQRankSum=-0.742;QD=8.30;ReadPosRankSum=0.283;VQSLOD=2.6365;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,2:39:21.97:0,22,490	0/0:8,0:8:17.91:0,18,139	0/1:18,0:15:5.73:6,0,35	0/1:11,0:10:10.72:11,0,47	0/0:14,0:14:23.86:0,24,186	0/0:17,1:19:5.27:0,5,214	0/0:18,1:20:1.38:0,1,182	0/0:22,0:23:43.40:0,43,327	0/1:3,7:12:8.23:83,0,8	0/1:13,1:14:0.62:1,0,175	0/0:13,0:14:34.68:0,35,248	0/0:10,0:7:11.92:0,12,89	1/1:5,10:15:30.06:304,30,0	0/1:5,11:16:16.40:213,0,16	0/0:15,0:13:26.86:0,27,206	0/0:9,0:4:8.96:0,9,70	0/0:30,0:33:59.83:0,60,427	0/0:13,0:13:8.69:0,9,175	1/1:11,10:22:15.64:316,16,0	0/1:6,7:14:19.53:212,0,20	0/1:7,11:18:13.38:241,0,13	0/0:6,0:6:8.95:0,9,69	1/1:1,3:4:9.02:91,9,0	1/1:1,5:6:12.02:122,12,0	0/1:9,1:10:6.59:7,0,132	0/0:14,0:14:41.82:0,42,322	0/1:14,1:16:26.31:26,0,139	0/0:18,0:18:47.75:0,48,360
chr10	15744425	.	C	CTTT	2400.74	PASS	AB=0.675;AC=45;AF=0.804;AN=56;BaseQRankSum=1.628;DP=467;FS=2.095;HRun=12;HaplotypeScore=102.2908;InbreedingCoeff=-0.1206;MQ=58.43;MQ0=16;MQRankSum=0.208;QD=5.14;ReadPosRankSum=1.611;VQSLOD=-0.2500;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:8,0:31:24.66:40,0,25	0/1:4,0:9:1.86:2,0,58	0/1:35,0:18:4.38:4,0,100	0/1:21,0:10:13.37:13,0,26	1/1:4,0:13:11.68:38,12,0	0/1:7,0:21:5.90:53,0,6	1/1:1,0:8:4.98:11,5,0	0/1:4,0:21:28.43:74,0,28	1/1:6,2:8:17.94:209,18,0	0/1:7,0:20:14.63:15,0,17	1/1:5,0:13:10.70:43,11,0	1/1:3,0:9:8.28:35,8,0	1/1:8,2:10:18.03:195,18,0	1/1:11,2:11:20.26:228,20,0	0/1:7,0:11:18.76:31,0,19	1/1:4,0:5:6.23:14,6,0	0/1:7,0:40:32.25:46,0,32	0/1:8,0:17:6.50:63,0,6	1/1:24,2:24:37.19:377,37,0	1/1:7,10:16:23.88:259,24,0	1/1:9,3:10:20.98:276,21,0	1/1:1,0:4:6.73:31,7,0	1/1:1,5:5:6.02:110,6,0	1/1:8,10:15:15.05:249,15,0	1/1:5,0:10:6.23:14,6,0	0/1:6,0:18:5.30:52,0,5	1/1:2,0:13:12.19:29,12,0	1/1:11,0:17:13.60:33,14,0
chr10	15744601	.	CT	C	1301.03	PASS	AB=0.811;AC=16;AF=0.286;AN=56;BaseQRankSum=3.436;DP=386;FS=0.000;HRun=13;HaplotypeScore=42.6039;InbreedingCoeff=0.5981;MQ=67.35;MQ0=0;MQRankSum=-0.547;QD=9.86;ReadPosRankSum=3.261;VQSLOD=2.3082;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,22:28:29.48:371,29,0	0/1:2,1:3:12.90:13,0,49	0/1:9,0:6:6.83:7,0,102	0/1:11,1:11:19.78:20,0,86	0/0:14,1:15:11.13:0,11,266	0/0:14,1:15:11.10:0,11,260	0/0:16,0:16:20.44:0,20,350	0/0:16,1:17:11.14:0,11,265	0/0:9,0:10:12.87:0,13,74	0/0:8,0:8:18.01:0,18,167	0/0:12,1:13:11.11:0,11,257	1/1:2,12:15:30.89:208,31,0	0/0:4,0:11:11.59:0,12,67	0/0:3,0:8:3.31:0,3,15	0/1:3,9:12:2.44:92,0,2	1/1:1,9:11:19.93:137,20,0	0/0:32,1:33:58.92:0,59,668	1/1:4,18:23:49.75:356,50,0	0/0:6,0:9:14.63:0,15,92	0/0:4,0:17:23.97:0,24,132	0/0:4,0:10:2.84:0,3,14	1/1:0,5:5:8.89:66,9,0	0/0:2,0:13:17.51:0,18,87	0/0:1,0:13:8.52:0,9,43	1/1:0,13:13:29.83:219,30,0	0/0:19,0:20:17.18:0,17,194	0/0:20,0:20:45.46:0,45,416	0/0:6,0:6:18.03:0,18,175
chr10	15744604	.	T	TTTT	1013.73	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-2.801;DP=387;FS=0.694;HRun=10;HaplotypeScore=59.6629;InbreedingCoeff=0.8689;MQ=67.27;MQ0=0;MQRankSum=-0.016;QD=11.65;ReadPosRankSum=-2.758;VQSLOD=-0.6718;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:58.04:0,58,355	0/0:4,0:4:8.92:0,9,82	0/0:10,0:7:11.80:0,12,109	0/0:11,0:10:14.30:0,14,109	0/0:14,0:14:29.85:0,30,300	0/0:15,0:15:29.87:0,30,308	0/0:16,0:16:34.89:0,35,361	0/0:16,0:16:29.78:0,30,300	1/1:4,5:10:12.02:156,12,0	0/0:8,0:8:11.82:0,12,129	0/0:14,0:14:29.81:0,30,297	0/0:16,0:16:32.28:0,32,193	1/1:10,0:10:6:77,6,0	1/1:7,0:7:6:62,6,0	0/0:13,0:13:14.54:0,15,88	0/0:10,0:10:20.59:0,21,123	0/0:34,0:34:22.61:0,23,469	0/0:23,0:23:49.93:0,50,299	1/1:9,0:9:11.84:142,12,0	1/1:16,0:16:26.97:329,27,0	1/1:10,0:10:3.01:54,3,0	0/0:5,0:5:8.74:0,9,53	1/1:12,0:12:18.49:261,18,0	1/1:13,0:13:9.01:119,9,0	0/0:14,0:14:29.38:0,29,176	0/0:21,0:21:20.48:0,20,211	0/0:20,0:20:17.61:0,18,353	0/0:6,0:6:17.97:0,18,171
chr10	15746806	.	T	TC	2651.15	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=-7.704;DP=505;FS=4.373;HRun=7;HaplotypeScore=55.4212;InbreedingCoeff=0.9414;MQ=88.15;MQ0=0;MQRankSum=-4.369;QD=19.49;ReadPosRankSum=1.946;VQSLOD=3.2848;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,13:18:30.09:362,30,0	0/0:9,0:9:12.01:0,12,116	0/0:16,0:16:23.88:0,24,210	0/0:24,0:25:43.52:0,44,341	0/0:20,0:20:37.42:0,37,527	0/0:28,0:28:67.54:0,68,661	0/0:20,0:20:39.05:0,39,377	0/1:20,0:20:0.46:0,0,179	0/0:17,0:17:45.05:0,45,429	0/0:14,0:14:20.48:0,20,226	0/0:13,0:13:29.77:0,30,278	1/1:0,15:15:23.97:287,24,0	0/0:19,0:19:51.05:0,51,480	0/0:14,0:14:35.99:0,36,336	1/1:2,20:22:51.16:616,51,0	1/1:1,16:17:27.08:326,27,0	0/0:22,0:22:63.10:0,63,608	1/1:2,18:20:57.16:676,57,0	0/0:21,0:21:48.06:0,48,463	0/0:22,0:22:47.80:0,48,446	0/0:16,0:16:27.48:0,27,256	1/1:3,8:11:24.07:290,24,0	0/0:17,0:17:42.06:0,42,405	0/0:31,0:31:81.12:0,81,782	1/1:1,12:13:24.07:290,24,0	0/0:12,0:12:33.04:0,33,313	0/0:25,0:25:63.08:0,63,607	0/0:8,0:8:18.02:0,18,174
chr10	15747610	.	CCACACACA	C	5632.36	PASS	AB=0.786;AC=22;AF=0.393;AN=56;BaseQRankSum=5.770;DP=619;FS=5.579;HRun=0;HaplotypeScore=203.6732;InbreedingCoeff=0.8014;MQ=60.64;MQ0=18;MQRankSum=-7.673;QD=24.60;ReadPosRankSum=-4.287;VQSLOD=2.9536;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:33:58.53:0,59,1356	0/1:3,4:7:12.97:149,0,13	0/0:52,0:21:26.97:0,27,475	0/0:36,0:15:11.98:0,12,166	1/1:8,8:16:14.97:251,15,0	1/1:19,6:26:50.94:876,51,0	1/1:15,4:19:18.02:380,18,0	1/1:12,12:24:34.35:593,34,0	0/0:18,0:19:15.63:0,16,484	1/1:15,4:18:36.04:747,36,0	1/1:11,6:17:15.05:353,15,0	0/0:14,0:24:6.43:0,6,463	0/0:11,0:13:16.65:0,17,435	0/1:27,0:29:53.31:53,0,682	0/0:10,0:12:29.64:0,30,580	0/0:16,0:16:11.43:0,11,262	1/1:13,12:25:12.04:296,12,0	0/0:36,0:41:80.72:0,81,1725	0/0:20,0:19:35.25:0,35,747	0/0:21,0:21:23.11:0,23,658	0/0:22,0:24:30.09:0,30,840	0/0:5,0:6:12.04:0,12,241	0/0:13,0:13:12.84:0,13,435	0/0:37,0:38:31.99:0,32,1014	0/0:20,0:19:28.22:0,28,607	1/1:20,4:24:55.22:1322,55,0	1/1:8,9:17:14.03:362,14,0	1/1:2,3:5:12.01:250,12,0
chr10	15747631	.	CACACACCCGCACGCA	C	6601.23	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=5.954;DP=604;FS=1.922;HRun=0;HaplotypeScore=255.5247;InbreedingCoeff=0.6585;MQ=45.99;MQ0=37;MQRankSum=-6.555;QD=25.79;ReadPosRankSum=1.885;VQSLOD=3.2868;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:14.77:0,15,1471	1/1:6,1:7:12.03:246,12,0	0/0:35,0:8:24.06:0,24,468	0/0:25,0:6:13.65:0,14,246	1/1:11,3:14:9.03:324,9,0	1/1:18,6:23:36.82:960,37,0	1/1:18,1:19:25.40:408,25,0	0/1:25,0:23:98.49:224,0,98	0/0:21,0:19:42.06:0,42,805	1/1:12,4:14:17:720,17,0	1/1:9,6:14:15.05:522,15,0	0/0:29,0:27:10.06:0,10,785	0/0:12,0:12:27.09:0,27,581	0/1:29,0:28:55.67:56,0,973	0/0:13,0:12:30.10:0,30,654	0/0:14,0:13:0.17:0,0,424	1/1:19,5:24:20.09:467,20,0	0/0:36,0:35:67.81:0,68,1837	0/1:23,0:18:19.37:19,0,972	0/0:20,0:19:36.08:0,36,944	0/0:33,0:31:30.72:0,31,984	0/0:7,0:6:3.82:0,4,285	0/0:14,0:14:1.11:0,1,518	0/0:38,0:38:43.33:0,43,1194	0/0:18,0:17:36.08:0,36,822	1/1:27,8:32:19.36:1631,19,0	1/1:12,5:17:23.61:693,24,0	1/1:6,2:7:12.04:332,12,0
chr10	15747636	.	ACCCG	A	3671.34	PASS	AB=0.956;AC=38;AF=0.679;AN=56;BaseQRankSum=11.889;DP=580;FS=0.934;HRun=0;HaplotypeScore=175.6116;InbreedingCoeff=-0.1314;MQ=44.49;MQ0=36;MQRankSum=-7.587;QD=6.97;ReadPosRankSum=6.599;VQSLOD=2.2797;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:26,2:28:99:130,0,136	1/1:7,0:7:11.94:101,12,0	1/1:25,0:4:2.88:15,3,0	0/1:15,0:4:7.40:7,0,32	1/1:15,0:15:11.99:111,12,0	1/1:23,0:22:32.70:239,33,0	1/1:22,0:22:16.12:220,16,0	0/1:24,0:22:83.31:135,0,83	0/1:19,0:17:61.46:61,0,84	1/1:16,0:14:36.89:282,37,0	1/1:15,0:14:14.90:119,15,0	0/1:21,7:26:15.99:357,0,16	0/1:11,0:11:4.25:4,0,103	0/1:27,0:26:99:128,0,111	0/1:13,2:14:34.63:88,0,35	1/1:8,6:13:21.05:283,21,0	1/1:25,0:25:7.10:139,7,0	0/1:32,1:32:74.96:75,0,179	0/1:24,0:16:30.46:30,0,198	0/0:20,0:19:2.24:0,2,120	0/0:33,0:30:31.57:0,32,229	0/1:7,0:6:6.16:39,0,6	0/1:14,0:14:5.94:6,0,72	0/1:36,0:36:9.85:10,0,186	0/1:15,5:18:62.49:149,0,62	1/1:37,0:34:42.77:584,43,0	1/1:18,0:18:27:263,27,0	1/1:8,0:7:11.87:95,12,0
chr10	15747638	.	CCGCACGCA	C	10341.06	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=0.608;DP=559;FS=2.529;HRun=0;HaplotypeScore=177.5008;InbreedingCoeff=0.5625;MQ=44.74;MQ0=33;MQRankSum=0.698;QD=19.70;ReadPosRankSum=2.666;VQSLOD=4.3079;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:26:14.99:227,15,0	1/1:6,0:6:12.02:252,12,0	0/0:20,0:3:3.01:0,3,87	0/0:13,0:4:6.74:0,7,95	1/1:13,2:15:12.04:284,12,0	1/1:16,7:22:35.80:656,36,0	1/1:10,12:22:17.99:332,18,0	1/1:21,3:22:18.01:318,18,0	1/1:8,10:16:21.03:433,21,0	1/1:13,5:16:28.88:584,29,0	1/1:13,2:14:15.05:345,15,0	1/1:25,1:25:30.07:637,30,0	1/1:5,6:11:9.03:230,9,0	1/1:10,17:26:30.05:686,30,0	1/1:9,5:13:6.49:123,6,0	1/1:10,4:13:24.08:496,24,0	1/1:24,2:26:24:446,24,0	1/1:29,1:29:26.97:433,27,0	1/1:12,8:14:21.07:412,21,0	1/1:6,14:19:15.01:288,15,0	1/1:19,13:29:3.01:50,3,0	1/1:7,0:6:9:126,9,0	1/1:7,7:14:5.98:97,6,0	1/1:14,20:34:6.49:154,6,0	1/1:13,6:18:18.02:325,18,0	1/1:22,15:34:66.04:1488,66,0	1/1:15,2:17:26.96:657,27,0	1/1:8,0:7:12.04:264,12,0
chr10	15747639	.	CGCA	C	1163.32	PASS	AB=0.943;AC=24;AF=0.429;AN=56;BaseQRankSum=10.350;DP=548;FS=14.608;HRun=0;HaplotypeScore=173.0164;InbreedingCoeff=-0.1928;MQ=44.67;MQ0=31;MQRankSum=-6.730;QD=3.12;ReadPosRankSum=8.192;VQSLOD=0.6403;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:16,10:26:65.96:66,0,85	0/1:7,0:7:29.34:29,0,32	0/0:16,0:2:3.01:0,3,65	0/0:13,0:5:11.06:0,11,144	1/1:15,0:15:11.71:69,12,0	0/1:23,0:22:56.44:75,0,56	0/0:22,0:22:0.78:0,1,129	0/0:24,0:22:19.19:0,19,337	0/1:18,0:16:2.61:3,0,130	0/1:18,0:16:63.53:64,0,112	1/1:15,0:14:8.92:53,9,0	0/1:27,0:25:11.90:219,0,12	0/1:11,0:11:7.44:7,0,103	0/1:26,0:25:52.58:53,0,92	0/1:12,2:13:8.09:50,0,8	1/1:13,1:13:10.99:134,11,0	0/1:25,0:25:22.92:39,0,23	0/1:21,8:28:19.84:20,0,143	0/0:19,0:13:1.79:0,2,199	0/1:19,0:18:7.34:7,0,149	0/0:32,0:29:29.03:0,29,317	0/1:6,0:6:13.92:14,0,25	0/0:14,0:14:4.82:0,5,134	0/0:34,0:34:3.12:0,3,196	0/1:15,4:17:1.39:102,0,1	0/1:37,0:34:99:150,0,141	1/1:15,0:15:24.91:135,25,0	0/1:8,0:7:6.60:34,0,7
chr10	15747645	.	CA	C	635.28	PASS	AB=0.942;AC=20;AF=0.357;AN=56;BaseQRankSum=9.697;DP=511;FS=1.697;HRun=1;HaplotypeScore=156.7048;InbreedingCoeff=-0.1597;MQ=44.80;MQ0=27;MQRankSum=-5.630;QD=2.14;ReadPosRankSum=7.160;VQSLOD=-0.7414;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:18,2:20:7.24:7,0,407	0/1:7,0:7:16.17:16,0,52	0/0:13,0:4:12.02:0,12,138	0/0:13,0:6:14.78:0,15,180	1/1:13,0:13:8.44:34,8,0	0/1:22,0:22:72.72:73,0,113	0/1:21,0:21:1.38:1,0,203	0/0:22,0:20:18.33:0,18,441	0/0:15,0:14:9.42:0,9,120	0/1:16,0:15:69.62:70,0,148	1/1:13,0:12:2.57:35,3,0	0/1:16,7:21:94.23:118,0,94	0/0:9,0:9:4.40:0,4,130	0/1:25,0:24:11.74:12,0,164	0/0:10,2:11:1.44:0,1,158	0/1:8,5:12:21.41:54,0,21	0/1:26,0:26:27.85:77,0,28	0/0:31,1:31:17:0,17,627	0/0:16,0:11:19.54:0,20,289	0/0:18,0:17:7.34:0,7,166	0/0:31,0:28:26.29:0,26,401	0/1:9,0:8:39.45:39,0,92	0/1:11,0:11:9.30:9,0,120	0/0:32,0:32:11.68:0,12,224	0/1:14,5:17:33.64:34,0,150	0/1:35,0:32:99:112,0,166	1/1:15,0:15:16.09:69,16,0	0/1:9,0:8:35.42:35,0,47
chr10	15749795	.	C	CATAA	14141.41	PASS	AB=1.000;AC=42;AF=0.750;AN=56;BaseQRankSum=-13.575;DP=768;FS=1.195;HRun=0;HaplotypeScore=110.5533;InbreedingCoeff=0.0321;MQ=71.68;MQ0=10;MQRankSum=-2.973;QD=19.97;ReadPosRankSum=0.195;VQSLOD=4.3924;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,40:40:48.16:1291,48,0	0/1:11,0:11:25.32:25,0,127	0/0:33,0:21:38.75:0,39,449	0/0:27,0:16:40.34:0,40,361	0/1:36,0:36:99:412,0,179	0/1:20,0:20:99:184,0,138	0/1:33,0:33:99:424,0,112	1/1:41,0:40:99:1019,112,0	1/1:1,30:33:26.90:708,27,0	0/1:33,0:32:99:268,0,199	0/1:28,0:28:99:192,0,191	1/1:1,17:19:9.03:242,9,0	1/1:1,17:18:14.59:403,15,0	1/1:2,18:21:15.05:404,15,0	1/1:2,20:22:15.05:404,15,0	1/1:1,21:22:26.99:726,27,0	0/1:25,0:25:96:257,0,96	1/1:0,20:20:21.07:565,21,0	1/1:3,30:33:92.72:1309,93,0	1/1:5,29:35:74.43:1566,74,0	1/1:2,21:23:12.04:323,12,0	1/1:0,19:19:38.53:557,39,0	1/1:0,22:22:18.30:424,18,0	1/1:4,28:34:15.05:403,15,0	1/1:0,25:25:36.12:961,36,0	0/1:31,0:31:99:250,0,234	0/1:19,0:19:83.49:217,0,83	0/1:43,0:42:32.71:607,0,33
chr10	15751481	.	GT	G	3899.55	PASS	AB=0.680;AC=45;AF=0.833;AN=54;BaseQRankSum=-1.940;DP=328;FS=30.518;HRun=3;HaplotypeScore=39.4921;InbreedingCoeff=0.2064;MQ=80.42;MQ0=58;MQRankSum=-3.940;QD=14.61;ReadPosRankSum=5.213;VQSLOD=1.2357;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,12:9:17.84:221,18,0	0/1:2,3:5:13.81:95,0,14	0/0:22,0:15:41.44:0,41,499	0/0:38,0:27:66.56:0,67,849	0/1:8,5:10:25.46:126,0,25	0/1:4,7:9:9.83:196,0,10	1/1:4,8:6:12.04:147,12,0	1/1:10,17:20:8.92:500,9,0	1/1:1,10:10:24.08:293,24,0	1/1:2,3:4:3.78:103,4,0	1/1:1,5:3:6.02:74,6,0	1/1:5,3:4:12.03:139,12,0	1/1:2,2:2:3.01:37,3,0	1/1:3,6:8:18.06:216,18,0	1/1:1,6:6:12.04:147,12,0	1/1:0,9:6:18.06:217,18,0	0/1:17,4:14:21.69:22,0,24	1/1:9,0:7:3.93:25,4,0	1/1:4,4:6:14.86:148,15,0	1/1:2,3:5:9.03:110,9,0	1/1:3,9:7:18.06:220,18,0	1/1:1,9:6:15.05:184,15,0	1/1:3,6:7:3.95:136,4,0	1/1:19,2:13:9.02:100,9,0	./.	1/1:1,10:8:21.05:244,21,0	1/1:6,0:5:2.03:5,2,0	0/1:4,8:10:18.48:196,0,18
chr10	15752326	.	ACCT	A	8427.11	PASS	AC=16;AF=0.296;AN=54;BaseQRankSum=15.291;DP=696;FS=2.287;HRun=0;HaplotypeScore=107.4846;InbreedingCoeff=0.9855;MQ=83.40;MQ0=0;MQRankSum=-5.601;QD=41.93;ReadPosRankSum=2.994;VQSLOD=6.2769;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:56:99:0,160,3500	0/0:9,0:9:27.09:0,27,592	0/0:19,0:19:54.19:0,54,1215	0/0:27,0:27:37.98:0,38,1451	0/0:21,0:21:60.16:0,60,1270	0/0:16,0:16:36.12:0,36,816	0/0:25,0:25:66.21:0,66,1451	0/0:30,0:30:81.26:0,81,1733	1/1:1,32:33:93.32:1549,93,0	0/0:22,0:22:66.23:0,66,1495	0/0:14,0:14:42.14:0,42,951	0/0:33,0:33:90.31:0,90,2018	1/1:0,23:23:60.20:988,60,0	1/1:2,23:25:60.20:987,60,0	0/0:24,0:24:72.25:0,72,1615	0/0:19,1:20:7.21:0,7,1174	0/0:37,0:37:99:0,105,2380	0/0:30,0:30:87.26:0,87,1924	1/1:4,24:28:72.23:1172,72,0	1/1:0,9:9:27.05:409,27,0	1/1:0,40:40:99:1686,105,0	0/0:28,0:28:84.29:0,84,1903	1/1:0,14:14:36.12:586,36,0	1/1:3,26:29:63.22:1049,63,0	0/0:20,0:20:54.19:0,54,1217	0/0:33,0:33:87.30:0,87,1971	0/0:31,0:31:87.30:0,87,1947	./.
chr10	15753089	.	T	TGCGC	690.37	PASS	AB=0.556;AC=14;AF=0.304;AN=46;BaseQRankSum=1.109;DP=168;FS=3.863;HRun=0;HaplotypeScore=35.7902;InbreedingCoeff=0.5263;MQ=62.04;MQ0=18;MQRankSum=-0.011;QD=14.69;ReadPosRankSum=0.274;VQSLOD=2.7213;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:7:9.03:0,9,131	0/0:2,0:2:3.01:0,3,36	0/0:6,0:1:0.47:0,0,1	0/0:12,0:5:2.55:0,3,26	0/0:2,0:2:3:0,3,25	0/0:5,0:5:5.87:0,6,113	0/0:9,0:8:7.79:0,8,131	0/0:10,0:6:8.99:0,9,110	1/1:6,0:5:12.04:201,12,0	0/0:5,0:3:9.03:0,9,136	0/0:2,0:2:0:0,0,0	0/0:3,0:3:6.02:0,6,95	0/1:1,4:5:0:0,0,0	1/1:4,0:4:3.01:75,3,0	./.	./.	0/0:30,0:29:13.42:0,13,439	0/0:15,0:13:28.08:0,28,410	1/1:5,0:3:1.25:3,1,0	0/1:1,3:5:0:0,0,0	1/1:13,0:12:24:340,24,0	./.	0/0:1,0:1:0:0,0,0	1/1:7,0:7:12:195,12,0	./.	0/0:4,0:2:3.01:0,3,43	1/1:2,0:2:0.47:1,0,0	./.
chr10	15753572	.	G	GGAGA	1227.61	PASS	AB=0.974;AC=37;AF=0.771;AN=48;BaseQRankSum=0.443;DP=429;FS=17.681;HRun=0;HaplotypeScore=114.1989;InbreedingCoeff=0.1607;MQ=51.13;MQ0=19;MQRankSum=-0.989;QD=3.44;ReadPosRankSum=-0.125;VQSLOD=1.1938;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:27:17.99:18,0,37	./.	./.	./.	1/1:8,0:9:2.84:14,3,0	0/0:12,0:11:0.43:0,0,1	1/1:19,0:18:2.53:11,3,0	1/1:17,0:15:2.97:20,3,0	1/1:21,0:20:10.54:134,11,0	0/0:18,0:16:1.71:0,2,23	1/1:11,0:11:3.01:35,3,0	./.	1/1:17,0:17:6.49:83,6,0	1/1:20,0:20:13.29:205,13,0	0/1:18,3:23:4.44:64,0,4	1/1:13,1:13:3.01:37,3,0	1/1:14,5:19:9.01:133,9,0	1/1:14,0:13:5.37:78,5,0	1/1:18,0:16:17.84:168,18,0	0/1:6,0:6:0:0,0,0	0/1:19,0:17:0:0,0,0	1/1:7,0:7:3:25,3,0	0/1:11,0:11:0:0,0,0	1/1:36,0:33:15.05:219,15,0	0/1:8,0:8:0:0,0,0	1/1:10,0:10:0.47:1,0,0	0/1:16,0:16:48.71:49,0,154	1/1:12,0:10:4.42:37,4,0
chr10	15753978	.	CTTCTTTCTTTCT	C	8574.67	PASS	AB=1.000;AC=21;AF=0.389;AN=54;BaseQRankSum=-6.562;DP=679;FS=1.491;HRun=0;HaplotypeScore=236.3015;InbreedingCoeff=0.8312;MQ=56.33;MQ0=3;MQRankSum=-6.839;QD=28.39;ReadPosRankSum=-1.631;VQSLOD=4.0719;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:36:51.16:0,51,2516	1/1:4,8:12:11.99:331,12,0	./.	0/0:10,0:7:2.96:0,3,19	1/1:10,14:24:26.95:589,27,0	1/1:15,16:30:27.09:936,27,0	1/1:20,14:33:0.28:353,0,0	0/1:13,0:12:15.01:20,0,15	0/0:11,0:24:40.16:0,40,998	1/1:16,17:33:49.78:1295,50,0	1/1:7,17:23:48.11:1390,48,0	0/0:8,0:21:42.14:0,42,1911	0/0:4,0:12:11.96:0,12,308	0/0:7,0:27:48.16:0,48,1248	0/0:12,0:23:27.56:0,28,1239	0/0:13,0:27:27.09:0,27,1402	1/1:18,15:33:5.85:207,6,0	0/0:9,0:23:24.08:0,24,1255	0/0:18,0:28:36.08:0,36,756	0/0:8,0:24:60.17:0,60,1288	0/0:10,0:23:23.74:0,24,662	0/0:7,0:17:36.12:0,36,1559	0/0:6,0:25:33.32:0,33,847	0/0:9,0:19:24.07:0,24,565	0/0:8,0:25:33.10:0,33,1516	1/1:12,18:30:54.16:1563,54,0	1/1:16,22:39:44.36:1391,44,0	1/1:22,6:27:15.05:500,15,0
chr10	15756332	.	C	CT	2061.35	PASS	AB=0.821;AC=17;AF=0.304;AN=56;BaseQRankSum=-5.381;DP=467;FS=19.925;HRun=8;HaplotypeScore=52.9420;InbreedingCoeff=0.7511;MQ=57.09;MQ0=12;MQRankSum=-0.812;QD=15.38;ReadPosRankSum=1.646;VQSLOD=2.0815;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:98.90:0,99,888	0/0:10,0:10:27.01:0,27,247	0/1:18,0:9:2.76:3,0,28	0/0:13,0:4:9.48:0,9,84	0/0:23,0:23:57.03:0,57,522	0/0:19,0:19:57.03:0,57,522	0/0:13,0:14:35.03:0,35,303	0/0:23,0:23:56.89:0,57,500	1/1:3,10:13:9.63:318,10,0	0/0:11,0:11:24.01:0,24,220	0/0:19,0:19:48.02:0,48,436	0/0:14,0:14:18.01:0,18,164	1/1:1,5:5:12.04:138,12,0	0/1:2,10:11:17.38:247,0,17	0/1:10,1:11:9.18:9,0,167	0/0:8,0:8:17.63:0,18,164	0/0:31,0:30:77.95:0,78,693	0/0:15,0:14:36:0,36,324	1/1:7,11:16:36.02:380,36,0	1/1:4,16:18:14.66:420,15,0	1/1:2,9:9:18.05:208,18,0	0/0:7,0:7:18:0,18,164	1/1:5,8:13:23.90:256,24,0	1/1:3,8:10:24.07:277,24,0	0/0:24,0:23:42.02:0,42,384	0/0:15,0:15:38.50:0,39,356	0/0:23,0:23:59.98:0,60,539	0/0:21,0:22:46.14:0,46,487
chr10	15756345	.	C	CT	1661.15	PASS	AB=0.818;AC=15;AF=0.268;AN=56;BaseQRankSum=-5.123;DP=442;FS=0.537;HRun=10;HaplotypeScore=49.9305;InbreedingCoeff=0.4946;MQ=54.24;MQ0=21;MQRankSum=1.505;QD=10.65;ReadPosRankSum=1.715;VQSLOD=2.3258;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,28:38:53.52:761,54,0	0/0:9,0:9:23.93:0,24,191	0/0:18,0:6:5.66:0,6,35	0/0:15,1:4:2.99:0,3,25	0/0:20,0:21:39.95:0,40,299	0/0:21,0:21:47.92:0,48,394	0/0:12,0:13:23.94:0,24,197	0/0:18,0:18:26.95:0,27,222	0/0:12,0:12:23.91:0,24,191	0/0:11,0:12:29:0,29,228	0/0:17,0:17:35.22:0,35,294	1/1:2,9:11:9.02:96,9,0	0/0:6,0:5:8.98:0,9,72	0/0:13,0:12:20.94:0,21,172	1/1:2,10:11:26.81:268,27,0	1/1:3,5:8:9.02:96,9,0	0/0:27,0:26:71.87:0,72,587	1/1:4,11:14:30.55:320,31,0	0/0:16,0:14:20.94:0,21,172	0/1:17,0:15:7.89:8,0,102	0/0:9,0:8:17.02:0,17,129	0/1:2,5:7:9.64:101,0,10	0/1:13,1:13:11:11,0,127	0/0:14,0:15:33.54:0,34,240	0/1:8,11:18:25.22:168,0,25	0/1:14,1:15:11.08:11,0,127	0/0:18,0:18:32.89:0,33,268	0/0:20,1:21:9.92:0,10,281
chr10	15757140	.	TCTCCTTCTC	T	12657.22	PASS	AB=0.808;AC=50;AF=0.893;AN=56;BaseQRankSum=1.173;DP=494;FS=30.919;HRun=0;HaplotypeScore=124.2986;InbreedingCoeff=0.5711;MQ=47.54;MQ0=12;MQRankSum=0.088;QD=27.46;ReadPosRankSum=3.938;VQSLOD=2.8245;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:22:33:664,33,0	1/1:2,8:10:3.01:75,3,0	0/0:16,0:12:9.03:0,9,166	0/0:17,0:10:7.58:0,8,94	1/1:21,0:20:39.01:651,39,0	1/1:17,1:17:36.08:597,36,0	1/1:6,12:18:3.01:69,3,0	1/1:17,9:24:23.94:265,24,0	1/1:14,0:11:23.91:438,24,0	1/1:16,0:16:24.03:425,24,0	1/1:15,0:15:27.01:497,27,0	1/1:16,0:14:24.07:555,24,0	1/1:12,0:12:15.05:334,15,0	1/1:15,0:13:27.09:567,27,0	1/1:15,2:15:9:480,9,0	1/1:14,1:14:27.09:631,27,0	1/1:16,0:16:24.04:417,24,0	0/1:18,0:16:2.04:335,0,2	1/1:9,15:20:45.09:878,45,0	1/1:19,1:19:36.03:582,36,0	1/1:9,0:7:9:125,9,0	1/1:19,0:17:39.12:822,39,0	0/1:6,10:15:0:0,0,0	1/1:17,0:16:2.71:203,3,0	1/1:15,3:18:18.62:548,19,0	1/1:16,2:18:45.04:831,45,0	1/1:26,0:26:38.61:828,39,0	1/1:14,0:15:38.16:840,38,0
chr10	15757163	.	TTCTC	T	1356.25	PASS	AB=0.911;AC=23;AF=0.411;AN=56;BaseQRankSum=8.711;DP=519;FS=9.997;HRun=0;HaplotypeScore=128.0261;InbreedingCoeff=-0.5701;MQ=33.23;MQ0=35;MQRankSum=-0.131;QD=3.41;ReadPosRankSum=9.529;VQSLOD=0.2480;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:17:62.72:92,0,63	0/1:9,0:9:3.91:4,0,55	0/0:21,0:2:6.02:0,6,124	0/0:30,0:6:18.05:0,18,233	0/1:14,6:18:58.57:59,0,121	0/1:15,1:12:14.40:14,0,135	0/0:16,0:13:0.21:0,0,49	0/0:19,0:13:24.52:0,25,352	0/1:11,5:12:56.02:56,0,183	0/1:12,2:14:46.51:47,0,189	0/1:10,4:14:63.64:64,0,141	0/1:21,0:16:80:123,0,80	0/1:11,3:13:47.75:48,0,136	0/1:13,7:17:52.29:128,0,52	0/1:22,0:17:79.11:79,0,131	0/1:18,1:17:26.11:122,0,26	0/1:11,1:11:19.60:20,0,61	0/1:18,0:15:56:56,0,64	0/1:22,0:16:30:127,0,30	0/1:20,2:21:13.09:13,0,258	0/1:7,0:3:5.10:5,0,15	0/1:23,0:22:99:106,0,143	0/0:15,0:14:3.78:0,4,104	0/0:18,1:17:24.45:0,24,250	0/1:16,1:14:35.43:35,0,202	0/1:25,2:23:51.61:52,0,299	0/1:17,7:24:41.61:136,0,42	1/1:9,4:12:16.63:127,17,0
chr10	15757176	.	TCTC	T	2238.85	PASS	AB=0.983;AC=30;AF=0.536;AN=56;BaseQRankSum=3.711;DP=551;FS=3.982;HRun=0;HaplotypeScore=114.6522;InbreedingCoeff=-0.4455;MQ=30.00;MQ0=59;MQRankSum=-0.013;QD=5.02;ReadPosRankSum=-0.573;VQSLOD=2.0791;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:15:4.98:79,0,5	0/1:8,0:8:11.80:12,0,30	0/0:46,0:1:3.01:0,3,68	0/0:37,0:2:6.02:0,6,83	0/1:26,0:24:27.61:168,0,28	0/1:13,0:9:26.98:59,0,27	0/1:21,0:14:11.02:29,0,11	0/0:22,0:15:13.42:0,13,200	0/1:14,0:10:51.11:86,0,51	0/1:16,0:16:59.56:176,0,60	0/1:20,0:18:21.38:111,0,21	0/1:19,0:14:8.12:114,0,8	0/1:8,4:11:41.21:60,0,41	0/1:22,0:18:18.82:160,0,19	0/1:20,0:16:46.26:69,0,46	1/1:21,0:18:0.99:115,1,0	0/1:12,0:10:0.57:86,0,1	0/1:17,0:13:8.40:41,0,8	1/1:23,0:20:15.92:224,16,0	0/1:20,0:19:26.98:100,0,27	1/1:7,0:3:2.94:18,3,0	0/1:15,1:16:44.68:98,0,45	0/1:15,0:12:10.21:10,0,30	0/1:16,0:13:9.49:9,0,44	0/1:15,0:12:33.29:56,0,33	0/1:25,0:20:90.95:91,0,94	1/1:25,0:24:22.98:217,23,0	1/1:16,0:13:23.93:206,24,0
chr10	15757179	.	C	CCTT	3899.04	PASS	AB=1.000;AC=44;AF=0.815;AN=54;BaseQRankSum=-0.158;DP=540;FS=19.155;HRun=0;HaplotypeScore=105.7198;InbreedingCoeff=0.4080;MQ=29.42;MQ0=62;MQRankSum=0.901;QD=9.56;ReadPosRankSum=2.172;VQSLOD=1.7996;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:14:0.64:0,1,2	1/1:7,0:7:3.01:36,3,0	0/0:47,0:1:3.01:0,3,45	0/0:37,0:2:5.50:0,6,47	1/1:26,0:24:41.05:367,41,0	1/1:13,0:9:18.05:213,18,0	1/1:21,0:13:1.96:63,2,0	1/1:21,0:14:21.07:285,21,0	1/1:15,0:10:24.43:245,24,0	1/1:18,0:18:17.48:281,17,0	1/1:18,0:16:26.82:233,27,0	1/1:19,0:14:1.25:3,1,0	1/1:12,0:11:18.01:183,18,0	1/1:22,0:18:32.40:304,32,0	0/1:19,0:15:7.67:11,0,8	1/1:19,0:15:3.47:26,3,0	1/1:12,0:9:5.92:33,6,0	1/1:17,0:13:3.41:20,3,0	1/1:22,0:20:34.42:406,34,0	1/1:19,0:18:21.56:204,22,0	./.	0/0:16,0:15:2.03:0,2,17	1/1:15,0:12:8.70:84,9,0	1/1:15,0:13:14.98:155,15,0	0/1:15,0:12:10.53:11,0,11	1/1:28,0:21:31.05:324,31,0	1/1:14,10:22:24.01:255,24,0	1/1:11,0:8:15.03:156,15,0
chr10	15757188	.	TCTA	T	3432.39	PASS	AB=1.000;AC=47;AF=0.870;AN=54;BaseQRankSum=4.390;DP=551;FS=1.435;HRun=0;HaplotypeScore=101.3934;InbreedingCoeff=0.2934;MQ=28.25;MQ0=76;MQRankSum=2.509;QD=7.48;ReadPosRankSum=4.687;VQSLOD=2.6924;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:13:17.90:112,18,0	1/1:6,0:6:0.47:1,0,0	0/0:47,0:1:3:0,3,28	0/0:37,0:2:5.82:0,6,33	1/1:28,0:26:51.91:296,52,0	1/1:16,0:9:20.17:116,20,0	0/1:19,0:10:18.77:19,0,21	0/1:23,0:13:26.62:114,0,27	1/1:13,1:9:25.64:164,26,0	1/1:21,0:20:0.65:224,1,0	1/1:21,0:18:43.39:255,43,0	1/1:18,3:15:23.80:178,24,0	1/1:12,0:9:17.64:107,18,0	1/1:20,0:16:33.89:199,34,0	1/1:21,1:17:23.72:169,24,0	1/1:19,0:15:20.77:149,21,0	1/1:10,0:6:11.24:53,11,0	1/1:14,0:11:8.95:71,9,0	0/1:23,0:20:4.72:134,0,5	1/1:17,0:16:2.64:115,3,0	./.	1/1:17,0:15:21.66:154,22,0	1/1:15,0:12:7.63:42,8,0	1/1:16,0:13:15.98:89,16,0	1/1:14,1:12:20.73:141,21,0	1/1:27,2:21:4.07:217,4,0	1/1:24,0:21:29.21:187,29,0	1/1:10,0:7:17.77:129,18,0
chr10	15757232	.	TTC	T	415.87	PASS	AB=0.810;AC=10;AF=0.192;AN=52;BaseQRankSum=3.573;DP=490;FS=4.227;HRun=0;HaplotypeScore=67.1786;InbreedingCoeff=0.3012;MQ=23.04;MQ0=151;MQRankSum=-0.202;QD=4.33;ReadPosRankSum=-0.693;VQSLOD=1.6427;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:17,2:10:14.82:99,0,15	0/0:3,0:3:3.01:0,3,53	./.	./.	0/0:24,0:23:56.85:0,57,681	0/0:22,0:11:30.08:0,30,375	0/0:24,0:8:18.06:0,18,276	0/0:57,0:9:24.05:0,24,294	0/0:18,0:14:23.61:0,24,268	0/0:29,0:24:60.12:0,60,799	0/0:20,0:17:39.11:0,39,493	1/1:7,8:8:14.37:144,14,0	0/0:17,0:9:6.02:0,6,74	0/0:19,0:10:18.05:0,18,244	1/1:12,1:7:4.07:56,4,0	0/1:5,6:8:30.96:33,0,31	0/0:11,0:3:3.01:0,3,50	1/1:8,2:4:3.01:41,3,0	0/0:16,0:8:21.07:0,21,346	0/0:18,0:15:36.11:0,36,480	0/0:13,0:3:2.68:0,3,11	0/1:12,5:11:19.35:135,0,19	0/0:13,0:10:21.07:0,21,306	0/0:24,0:13:24.54:0,25,310	0/1:10,1:7:28.13:49,0,28	0/0:34,0:22:56.78:0,57,729	0/0:16,0:13:12.04:0,12,147	0/0:16,0:8:9.03:0,9,127
chr10	15757234	.	C	CT	422.04	PASS	AB=0.886;AC=8;AF=0.154;AN=52;BaseQRankSum=3.635;DP=492;FS=0.000;HRun=2;HaplotypeScore=69.5939;InbreedingCoeff=-0.0018;MQ=23.02;MQ0=151;MQRankSum=0.662;QD=4.40;ReadPosRankSum=0.148;VQSLOD=0.2780;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:16,2:11:9.93:140,0,10	0/0:3,0:3:3.01:0,3,37	./.	./.	0/0:25,0:23:54.16:0,54,640	0/0:22,0:11:24.08:0,24,296	0/0:23,0:8:15.13:0,15,219	0/0:58,0:9:21.06:0,21,259	0/0:18,0:14:18.72:0,19,250	0/0:29,0:24:55.41:0,55,666	0/0:20,0:17:39.11:0,39,468	0/1:16,0:9:20.85:109,0,21	0/0:17,0:9:6.02:0,6,74	0/0:20,0:11:15.05:0,15,193	0/1:9,3:7:30.81:31,0,56	0/1:9,0:6:30.91:33,0,31	0/0:12,0:4:5.05:0,5,43	1/1:10,0:4:3.01:41,3,0	0/0:16,0:8:21.06:0,21,254	0/0:18,0:15:36.11:0,36,444	0/0:13,0:3:2.68:0,3,11	0/1:17,1:12:33.53:146,0,34	0/0:13,0:10:21.07:0,21,259	0/0:25,0:14:23.82:0,24,265	0/1:6,6:8:28.06:51,0,28	0/0:33,0:21:57.17:0,57,690	0/0:15,0:12:12.04:0,12,147	0/0:16,0:8:7.57:0,8,78
chr10	15757281	.	CCTTCTTCTACTT	C	1645.90	PASS	AB=0.969;AC=19;AF=0.380;AN=50;BaseQRankSum=-0.933;DP=498;FS=52.521;HRun=0;HaplotypeScore=137.3192;InbreedingCoeff=-0.0146;MQ=32.71;MQ0=116;MQRankSum=-8.155;QD=6.92;ReadPosRankSum=1.735;VQSLOD=0.8525;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:19,0:18:57.55:58,0,1078	./.	./.	./.	1/1:8,0:7:5.91:38,6,0	1/1:13,1:7:12.04:195,12,0	0/1:12,0:4:70.76:71,0,149	1/1:18,0:2:6:64,6,0	0/0:27,0:19:28.91:0,29,927	0/1:18,0:13:99:292,0,134	0/1:9,3:10:0:0,0,0	0/1:16,0:13:88.25:88,0,755	0/0:31,0:19:37.37:0,37,1195	0/0:20,0:12:21.07:0,21,449	0/0:16,0:12:21.07:0,21,1030	0/1:19,0:16:94.19:94,0,943	0/1:9,1:3:4.59:5,0,14	0/1:11,0:8:37.93:38,0,717	0/0:17,0:11:33.11:0,33,1025	0/0:27,0:24:54.44:0,54,1966	0/0:16,0:7:1.10:0,1,355	0/1:36,0:33:99:199,0,1561	0/0:24,0:20:48.16:0,48,1754	0/0:30,0:17:0.77:0,1,676	0/1:21,0:18:99:111,0,1220	0/1:17,1:12:99:530,0,125	1/1:6,0:4:2.88:15,3,0	0/0:4,9:11:6.02:0,6,121
chr10	15757434	.	T	TCTCCTC	5111.83	PASS	AB=0.961;AC=34;AF=0.630;AN=54;BaseQRankSum=-5.358;DP=395;FS=10.380;HRun=0;HaplotypeScore=70.0287;InbreedingCoeff=0.1928;MQ=29.12;MQ0=85;MQRankSum=3.393;QD=17.75;ReadPosRankSum=0.909;VQSLOD=2.4826;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:8:0.95:0,1,29	1/1:14,0:12:18.03:249,18,0	./.	0/0:20,0:1:3.01:0,3,38	1/1:20,0:19:32.90:419,33,0	1/1:11,3:14:29.58:589,30,0	0/1:16,0:12:11.69:192,0,12	1/1:12,0:7:11.92:101,12,0	1/1:6,0:1:3.01:54,3,0	0/1:25,3:23:74.93:732,0,75	1/1:23,2:21:39.09:680,39,0	0/0:10,0:7:6.02:0,6,33	1/1:11,0:4:1.56:47,2,0	1/1:5,0:1:3.01:40,3,0	0/1:10,0:9:5.92:6,0,15	0/0:8,0:5:1.82:0,2,5	1/1:15,0:12:23.72:264,24,0	0/1:11,0:7:25.99:54,0,26	1/1:8,0:1:2.50:9,2,0	1/1:11,0:5:3.01:52,3,0	0/0:5,0:1:2.94:0,3,18	0/0:14,0:8:5.67:0,6,29	1/1:5,0:3:3.01:54,3,0	1/1:11,0:6:4.51:23,5,0	0/0:12,0:6:5.44:0,5,59	0/1:26,1:21:71.23:909,0,71	1/1:18,2:19:23.95:416,24,0	0/1:16,2:17:27.99:222,0,28
chr10	15757485	.	CCTT	C	946.50	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=5.350;DP=383;FS=0.999;HRun=0;HaplotypeScore=116.2225;InbreedingCoeff=0.8722;MQ=41.20;MQ0=17;MQRankSum=-4.486;QD=17.21;ReadPosRankSum=-3.865;VQSLOD=2.6245;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:11:30.10:0,30,639	0/0:10,0:10:8.03:0,8,206	0/0:14,0:4:12.04:0,12,237	0/0:29,0:14:7.18:0,7,407	0/0:13,0:13:17.89:0,18,281	0/0:19,0:17:38.46:0,38,716	0/0:28,0:24:53.86:0,54,946	0/0:14,0:7:18.06:0,18,363	1/1:0,7:4:12.04:188,12,0	0/0:20,0:18:32.79:0,33,520	0/0:21,0:19:41.44:0,41,507	0/0:12,0:12:36.12:0,36,736	1/1:2,7:5:12.04:174,12,0	1/1:1,3:4:9.03:128,9,0	0/0:16,0:16:45.11:0,45,846	0/0:19,0:18:45.15:0,45,911	0/0:16,0:16:32.98:0,33,565	0/0:15,0:10:26.94:0,27,402	1/1:6,5:4:12.04:179,12,0	1/1:1,5:4:12.04:157,12,0	1/1:3,2:4:1.55:4,2,0	0/0:19,0:17:30.06:0,30,553	1/1:0,5:5:15.05:219,15,0	1/1:4,4:4:6.02:82,6,0	0/0:11,0:10:26.88:0,27,430	0/0:22,0:21:56.41:0,56,956	0/0:12,0:11:26.97:0,27,473	0/0:3,0:3:9.02:0,9,131
chr10	15757511	.	C	CCCTCCT	17283.31	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-0.773;DP=497;FS=1.275;HRun=0;HaplotypeScore=101.4147;InbreedingCoeff=0.7511;MQ=52.11;MQ0=8;MQRankSum=-6.676;QD=40.38;ReadPosRankSum=4.260;VQSLOD=4.6336;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,15:24:24.08:715,24,0	1/1:2,2:4:6.02:203,6,0	0/0:32,0:17:39.12:0,39,759	0/0:37,0:22:24.85:0,25,482	1/1:4,4:8:12.04:391,12,0	1/1:7,10:16:20.66:590,21,0	1/1:8,21:29:30.10:905,30,0	1/1:9,3:13:15.02:246,15,0	1/1:0,15:12:30.10:981,30,0	1/1:7,4:16:26.84:890,27,0	1/1:1,10:12:18.06:526,18,0	1/1:4,15:20:33.11:1116,33,0	1/1:2,13:14:24.08:807,24,0	1/1:0,7:6:12.04:402,12,0	1/1:6,12:21:27.09:860,27,0	1/1:3,25:27:45.15:1497,45,0	1/1:6,15:24:21.07:540,21,0	1/1:6,14:18:12.04:406,12,0	1/1:2,5:7:18.06:463,18,0	1/1:2,7:10:15.05:494,15,0	1/1:0,9:10:3.01:101,3,0	1/1:7,12:26:51.12:1469,51,0	1/1:1,10:12:21.07:706,21,0	1/1:4,7:12:21.07:649,21,0	1/1:5,11:16:24.08:758,24,0	1/1:5,12:19:42.12:1113,42,0	1/1:3,12:20:9.03:305,9,0	1/1:2,1:3:6.02:149,6,0
chr10	15758038	.	GT	G	1253.30	PASS	AB=1.000;AC=14;AF=0.250;AN=56;BaseQRankSum=16.598;DP=636;FS=1.161;HRun=10;HaplotypeScore=97.3332;InbreedingCoeff=0.6546;MQ=64.48;MQ0=2;MQRankSum=0.474;QD=6.43;ReadPosRankSum=0.724;VQSLOD=1.9680;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,1:29:51.95:0,52,771	0/0:12,0:12:27.06:0,27,290	0/0:15,0:10:20.10:0,20,187	0/1:14,0:11:8.94:9,0,101	0/0:31,2:33:20.08:0,20,659	0/0:23,2:25:37.11:0,37,629	0/0:23,1:24:30.80:0,31,571	0/0:39,0:38:90.22:0,90,972	0/1:22,0:22:1.65:120,0,2	0/0:32,0:33:96.07:0,96,1017	0/0:26,1:27:52.39:0,52,786	0/0:22,2:24:14.08:0,14,604	1/1:30,0:30:39.25:251,39,0	1/1:22,0:22:46.41:231,46,0	0/0:22,0:22:60.16:0,60,663	0/0:16,0:17:41.95:0,42,446	0/0:17,0:16:42.10:0,42,456	0/0:27,0:27:75.18:0,75,820	0/1:20,0:20:27.03:67,0,27	0/1:23,0:23:9.40:170,0,9	1/1:16,0:16:7.68:109,8,0	0/0:16,0:16:42.06:0,42,436	1/1:20,0:20:46.94:220,47,0	1/1:27,0:27:39.99:258,40,0	0/0:20,1:21:31.25:0,31,588	0/0:19,1:21:21.90:0,22,446	0/0:27,0:27:63.85:0,64,737	0/0:12,0:12:9.02:0,9,100
chr10	15758048	.	TA	T	4954.46	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=14.139;DP=612;FS=0.000;HRun=3;HaplotypeScore=78.0259;InbreedingCoeff=0.9662;MQ=57.72;MQ0=8;MQRankSum=-0.478;QD=29.49;ReadPosRankSum=0.548;VQSLOD=4.1623;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:74.04:0,74,965	0/0:9,0:9:27:0,27,337	0/0:16,0:7:8.87:0,9,203	0/0:15,0:7:7.12:0,7,118	0/0:27,0:27:54.88:0,55,746	0/0:27,0:27:58.95:0,59,761	0/0:22,0:21:51.20:0,51,730	0/0:41,0:37:99:0,102,1243	1/1:2,15:17:39.12:480,39,0	0/0:36,0:36:99:0,102,1243	0/0:28,0:28:73.07:0,73,941	0/0:23,0:23:46.60:0,47,745	1/1:0,27:27:72.16:868,72,0	1/1:0,23:23:54.16:649,54,0	0/0:25,0:25:60.18:0,60,787	0/0:20,0:20:45.11:0,45,569	0/0:18,0:17:39.13:0,39,522	0/0:26,0:26:72.24:0,72,962	1/1:11,9:16:39.01:435,39,0	1/1:1,21:22:57.11:675,57,0	1/1:0,14:14:33.10:406,33,0	0/0:14,0:14:33.11:0,33,441	1/1:0,19:19:51.16:628,51,0	1/1:1,25:26:66.21:812,66,0	0/0:21,0:21:57.38:0,57,717	0/0:18,0:18:49.27:0,49,613	0/0:25,0:25:66.08:0,66,855	0/0:4,0:4:9.03:0,9,120
chr10	15760043	.	G	GC	9491.78	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-7.554;DP=407;FS=4.918;HRun=8;HaplotypeScore=39.2927;InbreedingCoeff=0.6738;MQ=90.90;MQ0=0;MQRankSum=-7.922;QD=25.79;ReadPosRankSum=5.428;VQSLOD=4.8611;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,21:25:45.13:519,45,0	1/1:1,3:4:9.03:104,9,0	0/0:18,0:18:35.66:0,36,303	0/0:21,0:21:44.20:0,44,376	1/1:2,2:4:3.01:35,3,0	1/1:3,9:12:27.08:311,27,0	1/1:4,17:21:48.14:554,48,0	1/1:2,14:16:39.03:403,39,0	1/1:1,19:20:54.16:623,54,0	1/1:3,9:12:33.08:364,33,0	1/1:0,2:2:3.01:35,3,0	1/1:1,14:15:39.12:450,39,0	1/1:1,8:9:21.06:242,21,0	1/1:4,17:22:47.64:526,48,0	1/1:1,15:16:29.92:346,30,0	1/1:2,13:15:39.12:450,39,0	1/1:2,25:27:66.20:762,66,0	1/1:2,22:24:66.20:762,66,0	1/1:4,10:14:36.09:405,36,0	1/1:1,3:4:12.02:129,12,0	1/1:6,25:31:44.75:769,45,0	1/1:2,3:6:5.61:69,6,0	1/1:0,4:4:6.02:69,6,0	1/1:1,22:23:66.20:762,66,0	1/1:3,5:8:12.04:138,12,0	1/1:5,10:15:27.01:284,27,0	1/1:3,12:15:30.09:346,30,0	1/1:3,1:4:3.01:35,3,0
chr10	15760378	.	T	TG	818.66	PASS	AB=1.000;AC=39;AF=0.813;AN=48;BaseQRankSum=-0.761;DP=117;FS=10.849;HRun=8;HaplotypeScore=27.2053;InbreedingCoeff=0.3914;MQ=102.36;MQ0=0;MQRankSum=-3.464;QD=9.20;ReadPosRankSum=-2.237;VQSLOD=-0.3023;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:4,0:4:0:0,0,0	1/1:2,0:2:3.01:33,3,0	0/0:12,0:12:12.84:0,13,184	0/0:11,0:10:8.90:0,9,65	./.	1/1:2,0:2:3.01:35,3,0	1/1:5,2:7:3.01:35,3,0	1/1:4,0:4:3.01:35,3,0	1/1:5,0:5:11.92:92,12,0	1/1:5,1:6:6.01:62,6,0	./.	1/1:3,0:3:5.97:48,6,0	1/1:3,0:3:2.70:26,3,0	1/1:3,0:3:5.98:51,6,0	1/1:5,0:5:11.82:78,12,0	./.	1/1:3,0:3:3.01:34,3,0	1/1:8,0:8:11.73:94,12,0	1/1:4,1:5:5.93:49,6,0	1/1:3,0:3:2.92:17,3,0	1/1:13,0:13:14.71:93,15,0	1/1:4,0:4:2.92:18,3,0	0/1:1,0:1:0:0,0,0	0/1:1,0:1:0:0,0,0	./.	0/0:3,0:3:2.99:0,3,27	1/1:6,0:6:9.03:103,9,0	1/1:0,1:1:3.01:35,3,0
chr10	15760386	.	G	GA	1285.52	PASS	AB=1.000;AC=38;AF=0.731;AN=52;BaseQRankSum=2.215;DP=145;FS=10.345;HRun=1;HaplotypeScore=28.2058;InbreedingCoeff=0.4404;MQ=100.47;MQ0=0;MQRankSum=-3.477;QD=13.12;ReadPosRankSum=2.381;VQSLOD=1.3480;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,0:8:14.96:120,15,0	0/1:3,0:3:3.81:4,0,43	0/0:11,0:12:13.25:0,13,314	0/0:10,0:10:11.74:0,12,83	0/0:1,0:1:3:0,3,26	1/1:2,0:2:2.60:10,3,0	0/0:12,0:12:3.22:0,3,126	0/0:8,0:8:6.62:0,7,95	1/1:1,5:6:12.04:166,12,0	1/1:6,0:6:1.06:5,1,0	./.	1/1:0,3:3:6.02:84,6,0	1/1:1,1:2:2.71:42,3,0	1/1:2,3:5:6.02:83,6,0	1/1:0,5:5:12.04:169,12,0	./.	1/1:3,0:3:2.84:10,3,0	1/1:2,6:8:12.04:155,12,0	1/1:7,0:7:9.79:112,10,0	1/1:1,2:3:5.97:61,6,0	1/1:1,14:16:18.02:232,18,0	1/1:2,3:5:2.96:42,3,0	1/1:3,0:3:3:25,3,0	1/1:4,0:4:8.98:73,9,0	1/1:2,0:2:3:25,3,0	0/0:3,0:3:6.01:0,6,66	0/1:6,0:6:14.53:15,0,15	1/1:1,0:1:2.50:9,2,0
chr10	15761175	.	AAC	A	2101.41	PASS	AB=0.814;AC=31;AF=0.574;AN=54;BaseQRankSum=3.977;DP=533;FS=0.000;HRun=0;HaplotypeScore=83.4059;InbreedingCoeff=0.0399;MQ=78.22;MQ0=4;MQRankSum=1.377;QD=5.09;ReadPosRankSum=2.127;VQSLOD=2.1163;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:25,13:37:27.34:146,0,27	0/0:6,0:9:3:0,3,26	./.	0/0:27,0:24:0:0,0,0	0/0:22,2:24:9.01:0,9,113	0/1:10,1:11:17.79:18,0,155	0/1:18,1:19:5.75:6,0,301	0/0:17,0:17:7.26:0,7,75	0/1:12,9:22:62.59:124,0,63	0/1:22,3:25:62.94:63,0,291	0/0:11,0:10:15:0,15,197	1/1:11,16:28:25.79:251,26,0	0/1:6,3:9:9.06:57,0,9	1/1:6,4:10:5.88:66,6,0	0/1:6,3:8:15.94:27,0,16	1/1:10,6:16:5.31:121,5,0	0/1:28,4:31:91.06:91,0,499	1/1:13,7:21:20.88:204,21,0	1/1:8,3:11:6.02:66,6,0	1/1:12,5:17:10.84:129,11,0	1/1:22,6:28:22.39:200,22,0	0/1:15,0:27:8.72:26,0,9	1/1:12,4:15:14.54:174,15,0	1/1:13,13:27:23.11:281,23,0	1/1:10,6:16:12.03:131,12,0	0/1:19,1:20:43.51:44,0,300	0/1:7,3:10:47.36:47,0,110	0/0:3,0:3:5.99:0,6,66
chr10	15762736	.	C	CAT	11906.82	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=0.800;DP=495;FS=32.188;HRun=0;HaplotypeScore=64.3658;InbreedingCoeff=0.9948;MQ=88.68;MQ0=0;MQRankSum=-2.707;QD=47.82;ReadPosRankSum=2.066;VQSLOD=3.3963;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,20:21:60.20:1074,60,0	0/0:9,0:9:24.08:0,24,343	0/0:24,0:24:63.04:0,63,817	0/0:16,0:16:39.12:0,39,528	0/0:15,0:15:45.15:0,45,643	0/0:19,0:19:54.16:0,54,753	0/0:23,0:23:69.22:0,69,970	0/0:29,0:29:81.25:0,81,1113	1/1:1,12:13:39.13:710,39,0	0/0:13,0:13:36.12:0,36,516	0/0:11,0:11:27.08:0,27,369	1/1:0,15:15:36.12:660,36,0	1/1:1,12:13:36.12:659,36,0	1/1:2,18:20:51.17:925,51,0	1/1:1,17:18:48.16:877,48,0	1/1:1,18:19:45.15:822,45,0	0/0:39,0:39:99:0,105,1466	1/1:0,8:8:24.08:439,24,0	1/1:2,15:19:51.08:825,51,0	1/1:3,11:14:33.11:597,33,0	1/1:2,31:33:90.31:1648,90,0	1/1:0,10:10:30.10:550,30,0	1/1:1,13:14:39.13:711,39,0	1/1:4,16:20:48.16:863,48,0	1/1:2,10:12:30.10:549,30,0	0/0:22,0:22:60.20:0,60,859	0/0:21,0:21:63.21:0,63,901	0/0:5,0:5:12.04:0,12,170
chr10	15762739	.	A	ATG	6759.86	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=16.305;DP=470;FS=34.636;HRun=0;HaplotypeScore=80.7091;InbreedingCoeff=0.9496;MQ=88.66;MQ0=0;MQRankSum=-2.484;QD=29.26;ReadPosRankSum=1.849;VQSLOD=3.4549;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:20:59.63:610,60,0	0/0:9,0:9:24.08:0,24,385	0/0:24,0:24:72.16:0,72,1041	0/0:15,0:15:41.87:0,42,615	0/0:16,0:16:48.15:0,48,758	0/0:18,0:18:54.18:0,54,875	0/0:23,0:23:69.24:0,69,1122	0/0:30,0:30:84.26:0,84,1281	1/1:12,1:13:39.10:448,39,0	0/0:12,0:12:36.12:0,36,587	0/0:9,0:9:27.08:0,27,417	1/1:13,0:13:36.08:374,36,0	1/1:12,0:12:36.08:377,36,0	1/1:18,1:19:51.11:550,51,0	1/1:16,0:17:48.11:515,48,0	1/1:16,0:17:45.09:471,45,0	0/0:35,0:35:99:0,105,1672	1/1:9,0:9:4.08:229,4,0	1/1:16,1:18:2.64:351,3,0	1/1:12,1:13:33.09:390,33,0	1/1:30,0:30:90.20:936,90,0	1/1:10,0:10:30.06:308,30,0	1/1:13,0:13:39.09:418,39,0	1/1:17,0:17:27.11:470,27,0	1/1:10,0:10:30.07:314,30,0	0/0:22,0:22:63.21:0,63,1005	0/0:21,0:21:63.22:0,63,1026	0/0:5,0:5:12.04:0,12,196
chr10	15763151	.	TGGG	T	3896.12	PASS	AB=0.983;AC=24;AF=0.429;AN=56;BaseQRankSum=-15.094;DP=585;FS=2.941;HRun=13;HaplotypeScore=155.2157;InbreedingCoeff=0.8651;MQ=72.15;MQ0=5;MQRankSum=1.843;QD=15.77;ReadPosRankSum=-1.942;VQSLOD=0.9090;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:94.38:0,94,936	1/1:2,5:8:14.98:163,15,0	0/0:23,0:16:23.55:0,24,263	0/1:28,0:22:3.42:3,0,213	1/1:14,8:23:20.26:297,20,0	1/1:15,6:21:33.02:367,33,0	1/1:6,6:18:31.01:396,31,0	1/1:9,5:15:8.70:202,9,0	0/0:22,0:20:24.21:0,24,463	1/1:11,17:29:47.88:540,48,0	1/1:10,5:15:18.02:217,18,0	0/0:20,0:20:54.12:0,54,580	0/0:16,0:16:34.33:0,34,367	0/0:18,0:18:36.07:0,36,377	0/0:18,0:18:46.36:0,46,489	0/0:17,0:18:16.13:0,16,362	1/1:13,11:26:59.88:635,60,0	0/0:26,0:26:43.26:0,43,552	0/0:24,0:24:26.43:0,26,373	0/0:16,0:16:17.08:0,17,190	0/0:35,0:35:25.13:0,25,402	0/0:17,0:17:11.69:0,12,277	0/1:15,0:15:0.63:1,0,203	0/0:29,0:29:44.69:0,45,647	0/0:10,0:10:27.06:0,27,281	1/1:16,12:28:53.60:601,54,0	1/1:5,9:15:33:372,33,0	1/1:1,4:5:3.63:102,4,0
chr10	15763152	.	G	GGGGT	15650.90	PASS	AB=1.000;AC=31;AF=0.554;AN=56;BaseQRankSum=-12.496;DP=583;FS=4.927;HRun=0;HaplotypeScore=132.6604;InbreedingCoeff=0.9213;MQ=70.92;MQ0=5;MQRankSum=-2.648;QD=41.96;ReadPosRankSum=2.028;VQSLOD=4.8300;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:33,11:45:93.78:1990,94,0	0/0:7,0:7:14.91:0,15,171	0/0:23,0:16:13:0,13,152	0/1:27,0:20:11.46:11,0,183	0/0:20,0:20:41.73:0,42,487	0/0:21,0:21:41.65:0,42,493	0/0:18,0:18:51.16:0,51,690	0/0:13,0:13:27.08:0,27,347	1/1:19,1:22:57.55:1143,58,0	0/0:28,0:28:69.06:0,69,785	0/0:12,0:12:24.06:0,24,293	1/1:20,0:20:56.67:1168,57,0	1/1:19,0:19:45.07:922,45,0	1/1:16,3:20:42.11:919,42,0	1/1:20,0:20:55.42:1140,55,0	1/1:20,0:20:45.53:948,46,0	0/0:25,0:25:63.20:0,63,859	1/1:27,0:27:72.11:1332,72,0	1/1:26,0:26:63.11:1126,63,0	1/1:6,10:16:21:424,21,0	1/1:37,0:37:77.67:1090,78,0	1/1:17,0:17:38.95:711,39,0	1/1:15,0:15:36:629,36,0	1/1:29,0:29:78.07:1492,78,0	1/1:10,0:10:27.09:605,27,0	0/0:24,0:24:59.31:0,59,689	0/0:14,0:14:39.10:0,39,498	0/0:5,0:5:11.99:0,12,133
chr10	15763155	.	G	GT	5076.88	PASS	AB=0.661;AC=26;AF=0.464;AN=56;BaseQRankSum=5.240;DP=594;FS=5.837;HRun=0;HaplotypeScore=143.4645;InbreedingCoeff=0.6618;MQ=69.81;MQ0=5;MQRankSum=-2.105;QD=15.11;ReadPosRankSum=6.632;VQSLOD=6.4979;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,31:43:47.81:616,48,0	0/0:9,0:9:14.77:0,15,95	0/0:21,0:13:27.45:0,27,207	0/0:29,0:22:23.76:0,24,289	0/0:23,0:23:41.44:0,41,317	0/0:21,0:21:44.69:0,45,336	0/0:19,0:19:53.52:0,54,401	0/0:17,0:17:35.79:0,36,275	1/1:11,14:23:36.25:383,36,0	0/0:29,0:29:77.41:0,77,587	0/0:12,0:12:23.83:0,24,175	1/1:3,17:20:25.84:333,26,0	0/1:7,11:18:21.97:224,0,22	1/1:9,10:19:3.52:229,4,0	1/1:4,15:21:1.12:296,1,0	0/1:10,12:21:19.64:272,0,20	0/0:28,0:28:50.12:0,50,454	1/1:7,18:25:71.24:556,71,0	0/1:13,11:24:11.57:377,0,12	1/1:9,4:13:15.14:103,15,0	0/1:20,15:36:8.37:432,0,8	1/1:7,9:16:38.61:290,39,0	1/1:8,6:14:16.04:231,16,0	1/1:6,22:28:31.83:520,32,0	1/1:3,9:12:26.70:216,27,0	0/0:26,0:26:61.19:0,61,420	0/0:19,0:19:41.40:0,41,293	0/0:5,0:5:11.88:0,12,81
chr10	15763158	.	G	GGGT	9694.12	PASS	AB=1.000;AC=31;AF=0.554;AN=56;BaseQRankSum=-9.265;DP=582;FS=2.460;HRun=0;HaplotypeScore=150.1858;InbreedingCoeff=0.9135;MQ=69.22;MQ0=5;MQRankSum=-4.195;QD=29.92;ReadPosRankSum=6.337;VQSLOD=5.2343;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:10,30:41:89.57:1339,90,0	0/0:11,0:11:23.99:0,24,210	0/0:21,0:13:29.45:0,29,213	0/0:28,0:21:20.47:0,20,338	0/0:18,0:18:44.50:0,45,408	0/0:22,0:22:44.99:0,45,424	0/0:20,0:20:57.03:0,57,548	0/0:21,0:21:51.01:0,51,471	1/1:11,14:23:53.22:707,53,0	0/0:28,0:28:64.89:0,65,547	0/0:14,0:14:27.01:0,27,245	1/1:4,17:21:54.58:791,55,0	1/1:6,10:17:33.24:529,33,0	1/1:8,10:19:47.29:591,47,0	1/1:6,15:21:58.29:757,58,0	1/1:10,11:21:55.95:664,56,0	0/0:29,0:29:72.08:0,72,697	1/1:6,18:24:62.52:859,63,0	1/1:10,9:20:49.30:582,49,0	1/1:7,4:11:14.61:165,15,0	1/1:14,16:30:49.75:619,50,0	1/1:6,9:15:12.18:395,12,0	1/1:7,6:14:3.70:314,4,0	1/1:4,21:26:67.97:925,68,0	1/1:4,9:13:33.06:452,33,0	0/0:27,0:27:71.86:0,72,649	0/0:19,0:19:50.98:0,51,461	0/1:5,0:5:5.90:6,0,73
chr10	15763162	.	GGGT	G	1762.66	PASS	AB=0.856;AC=12;AF=0.214;AN=56;BaseQRankSum=-5.103;DP=590;FS=5.441;HRun=0;HaplotypeScore=162.6914;InbreedingCoeff=-0.0828;MQ=69.90;MQ0=5;MQRankSum=-1.075;QD=8.31;ReadPosRankSum=3.587;VQSLOD=2.6366;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,108,1510	0/1:12,0:12:48.23:48,0,89	0/0:20,0:12:29.73:0,30,320	0/0:30,0:23:32.32:0,32,369	0/1:14,4:18:54.02:202,0,54	0/1:12,10:22:81.51:245,0,82	0/1:19,2:21:33.27:223,0,33	0/1:19,3:22:99:100,0,314	0/0:24,0:22:55.39:0,55,771	0/1:25,2:27:99:116,0,156	0/1:10,2:12:85.86:109,0,86	0/0:23,0:23:69.08:0,69,946	0/0:18,0:18:29.59:0,30,638	0/0:19,0:19:48.09:0,48,670	0/0:21,0:21:58.01:0,58,808	0/0:22,0:21:52.04:0,52,703	0/1:19,9:28:27.61:422,0,28	0/0:23,0:23:62.92:0,63,874	0/0:20,0:20:53.92:0,54,725	0/0:15,0:15:32.02:0,32,366	0/0:30,0:30:64.99:0,65,785	0/0:15,0:15:33.36:0,33,474	0/0:14,0:14:30.06:0,30,398	0/0:27,0:27:72.14:0,72,1065	0/0:15,0:15:41.89:0,42,541	0/1:21,6:27:99:270,0,135	0/1:16,2:18:68.15:146,0,68	1/1:5,0:5:8.26:36,8,0
chr10	15763952	.	CTAA	C	4921.30	PASS	AB=1.000;AC=37;AF=0.661;AN=56;BaseQRankSum=7.216;DP=633;FS=0.368;HRun=0;HaplotypeScore=130.5425;InbreedingCoeff=-0.0034;MQ=77.85;MQ0=2;MQRankSum=-6.111;QD=9.22;ReadPosRankSum=-1.204;VQSLOD=4.3035;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:23:24:237,24,0	0/1:11,0:11:57.07:67,0,57	0/0:35,0:32:69.71:0,70,751	0/0:32,0:29:71.23:0,71,737	0/1:12,0:12:45.01:45,0,111	0/1:18,0:18:1.02:1,0,226	0/1:29,0:29:33.62:34,0,385	0/0:32,0:31:70.52:0,71,636	1/1:1,17:18:24.08:368,24,0	0/1:29,0:28:22.87:23,0,422	0/1:19,0:19:23.89:24,0,213	1/1:29,0:29:39.09:409,39,0	1/1:2,20:22:26.70:397,27,0	1/1:1,17:18:29.79:474,30,0	1/1:27,0:27:30.07:315,30,0	1/1:25,0:25:18.04:189,18,0	0/1:24,0:23:99:117,0,169	1/1:18,0:18:6.02:63,6,0	0/1:10,0:10:38.35:94,0,38	0/1:14,0:14:99:125,0,157	0/1:39,0:39:99:306,0,496	1/1:15,0:15:29.52:230,30,0	1/1:0,21:21:18.58:266,19,0	1/1:4,29:33:48.16:759,48,0	1/1:15,0:15:15.03:157,15,0	0/1:25,0:25:30.99:31,0,353	0/1:28,0:28:99:134,0,126	0/1:12,0:12:55.82:56,0,105
chr10	15763956	.	TAATAACAAC	T	4946.52	PASS	AB=1.000;AC=18;AF=0.321;AN=56;BaseQRankSum=-1.701;DP=660;FS=0.450;HRun=0;HaplotypeScore=195.6170;InbreedingCoeff=0.6497;MQ=73.98;MQ0=2;MQRankSum=-8.297;QD=19.87;ReadPosRankSum=1.087;VQSLOD=4.2429;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,27:27:26.95:677,27,0	0/0:11,0:11:32.97:0,33,376	0/0:32,0:29:70.17:0,70,751	0/0:30,0:27:72.48:0,72,740	0/0:17,0:17:47.51:0,48,664	0/0:17,0:17:41.95:0,42,444	0/0:33,0:33:80.98:0,81,809	0/0:31,0:29:77.79:0,78,776	0/0:18,0:18:27.09:0,27,491	0/0:30,0:29:84.17:0,84,1026	0/0:19,0:19:47.79:0,48,530	1/1:0,30:30:39.13:1193,39,0	0/0:22,0:22:12.11:0,12,468	0/0:21,0:21:42.14:0,42,873	1/1:0,30:30:30.10:918,30,0	1/1:1,25:26:18.06:551,18,0	0/0:26,0:25:72.12:0,72,978	1/1:2,19:21:6.02:184,6,0	0/1:9,0:9:90.79:91,0,280	0/1:15,0:15:99:121,0,721	0/1:38,0:38:99:210,0,2167	1/1:2,16:18:29.39:531,29,0	0/1:21,0:21:11.67:12,0,221	0/0:37,0:37:47.67:0,48,959	1/1:0,14:14:15.05:459,15,0	0/0:26,0:26:78.11:0,78,872	0/0:29,0:29:62.99:0,63,768	0/0:12,0:12:36:0,36,389
chr10	15763959	.	TAAC	T	5336.19	PASS	AB=1.000;AC=41;AF=0.788;AN=52;BaseQRankSum=9.742;DP=656;FS=3.006;HRun=0;HaplotypeScore=134.7426;InbreedingCoeff=0.5147;MQ=72.72;MQ0=2;MQRankSum=-1.108;QD=10.55;ReadPosRankSum=4.127;VQSLOD=4.5237;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:27:20.83:146,21,0	1/1:3,8:11:21.07:274,21,0	./.	./.	1/1:11,5:17:29.88:299,30,0	1/1:15,3:18:18.01:189,18,0	1/1:19,14:33:24.08:313,24,0	0/0:27,0:25:0:0,0,0	0/1:19,0:19:12.07:163,0,12	1/1:23,8:30:33.04:384,33,0	1/1:13,5:18:17.09:202,17,0	1/1:30,0:30:38.69:272,39,0	1/1:22,0:22:3.94:170,4,0	0/1:22,0:22:63.06:190,0,63	1/1:30,0:30:29.76:209,30,0	1/1:25,0:25:17.86:126,18,0	1/1:14,12:26:45.09:540,45,0	1/1:19,0:19:5.95:42,6,0	0/0:7,0:7:9.02:0,9,139	0/0:16,0:16:27.04:0,27,414	0/0:40,0:40:66.18:0,66,1136	1/1:16,0:16:14.50:95,14,0	1/1:21,0:21:14.24:131,14,0	0/1:37,0:37:35.24:331,0,35	1/1:14,0:14:14.88:105,15,0	1/1:19,8:27:36.05:413,36,0	1/1:9,22:31:39.13:507,39,0	1/1:6,6:12:18.06:235,18,0
chr10	15765965	.	T	TAC	21605.40	PASS	AC=30;AF=0.882;AN=34;BaseQRankSum=-8.287;DP=524;FS=0.709;HRun=0;HaplotypeScore=85.8913;InbreedingCoeff=0.9993;MQ=83.71;MQ0=3;MQRankSum=-8.400;QD=44.46;ReadPosRankSum=5.599;VQSLOD=6.5508;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,42:45:99:2076,117,0	./.	0/0:22,0:22:54.14:0,54,692	0/0:16,0:16:33.09:0,33,431	./.	./.	./.	./.	1/1:1,28:30:81.28:1435,81,0	./.	./.	1/1:3,34:38:93.32:1649,93,0	1/1:3,23:26:66.23:1169,66,0	1/1:3,39:43:99:1915,108,0	1/1:2,23:24:60.21:1065,60,0	1/1:1,18:19:45.15:798,45,0	./.	1/1:2,30:34:84.29:1490,84,0	1/1:0,21:24:72.24:1234,72,0	1/1:1,8:11:27.09:474,27,0	1/1:5,92:95:99:4206,238,0	1/1:3,15:18:39.13:692,39,0	1/1:2,19:22:51.17:901,51,0	1/1:2,30:32:84.29:1490,84,0	1/1:0,22:22:57.20:1011,57,0	./.	./.	./.
chr10	15766869	.	G	GA	5149.19	PASS	AB=0.589;AC=28;AF=0.824;AN=34;BaseQRankSum=-1.460;DP=347;FS=4.041;HRun=9;HaplotypeScore=106.1076;InbreedingCoeff=0.6265;MQ=90.96;MQ0=0;MQRankSum=-5.052;QD=16.29;ReadPosRankSum=2.765;VQSLOD=4.8559;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,3:35:63.14:348,63,0	./.	0/0:16,0:16:25.65:0,26,190	0/0:14,0:15:10.59:0,11,170	./.	./.	./.	./.	1/1:1,13:15:32.92:346,33,0	./.	./.	1/1:3,0:24:51.13:256,51,0	1/1:3,10:13:7.79:307,8,0	1/1:7,22:29:8.52:546,9,0	1/1:2,2:22:25.58:254,26,0	1/1:3,1:19:33.37:170,33,0	./.	1/1:0,2:13:37.30:223,37,0	1/1:5,15:21:51.08:538,51,0	1/1:3,16:20:50.92:530,51,0	0/1:3,8:11:8:148,0,8	0/1:5,0:15:0.26:90,0,0	1/1:7,18:25:19.91:427,20,0	1/1:6,24:30:57.15:631,57,0	1/1:2,4:24:51.93:337,52,0	./.	./.	./.
chr10	15768057	.	TTAATAATAA	T	1947.92	PASS	AB=0.846;AC=28;AF=0.875;AN=32;BaseQRankSum=-0.154;DP=186;FS=0.000;HRun=0;HaplotypeScore=54.6495;InbreedingCoeff=0.2197;MQ=65.36;MQ0=3;MQRankSum=-1.208;QD=14.54;ReadPosRankSum=1.736;VQSLOD=1.6275;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	./.	1/1:3,3:6:12.04:290,12,0	./.	0/1:21,0:19:35.23:92,0,35	1/1:5,0:7:2.49:5,2,0	1/1:5,3:8:9.03:195,9,0	./.	1/1:3,0:4:3.01:63,3,0	1/1:4,0:6:1.25:3,1,0	1/1:3,0:4:1.25:3,1,0	1/1:6,0:7:3.01:63,3,0	./.	1/1:16,2:19:8.11:261,8,0	1/1:5,5:8:6.02:163,6,0	./.	0/1:5,0:9:2.91:3,0,42	./.	./.	0/0:5,0:5:3.01:0,3,131	./.	1/1:5,0:10:12.04:251,12,0	1/1:3,2:5:6.02:163,6,0	1/1:4,2:6:6.02:163,6,0	1/1:8,4:11:12.04:327,12,0
chr10	15768116	.	GTTT	G	559.02	PASS	AB=0.625;AC=13;AF=0.250;AN=52;BaseQRankSum=2.942;DP=248;FS=2.105;HRun=15;HaplotypeScore=53.3442;InbreedingCoeff=0.6746;MQ=64.61;MQ0=16;MQRankSum=-1.482;QD=11.65;ReadPosRankSum=1.608;VQSLOD=0.1669;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:4:8.04:0,8,84	0/0:3,0:3:9.03:0,9,164	0/0:20,0:9:10.22:0,10,129	0/0:18,0:9:12.98:0,13,178	0/0:3,0:4:12.02:0,12,188	0/0:11,0:11:27.09:0,27,455	0/0:2,0:3:9.03:0,9,164	0/0:28,0:32:75.23:0,75,1183	1/1:4,5:6:11.97:135,12,0	0/0:5,0:4:8.98:0,9,97	0/0:5,0:5:9.01:0,9,117	0/0:2,0:2:5.94:0,6,43	1/1:0,2:2:6.02:67,6,0	1/1:2,4:4:12.03:134,12,0	0/0:5,0:5:12.04:0,12,175	0/0:1,0:1:3.01:0,3,52	0/0:21,0:23:60.05:0,60,922	0/0:18,0:15:36.12:0,36,635	1/1:5,5:10:18.74:228,19,0	1/1:7,4:10:7.44:98,7,0	1/1:2,1:2:3.01:34,3,0	./.	0/1:2,2:5:22.81:28,0,23	./.	0/0:8,0:8:18.06:0,18,323	0/0:6,0:6:18.06:0,18,311	0/0:8,0:11:26.84:0,27,376	0/0:10,0:12:12.04:0,12,180
chr10	15768222	.	G	GTTT	1867.93	PASS	AB=0.793;AC=29;AF=0.518;AN=56;BaseQRankSum=9.079;DP=428;FS=3.952;HRun=13;HaplotypeScore=67.2023;InbreedingCoeff=0.6308;MQ=57.08;MQ0=47;MQRankSum=-2.199;QD=8.19;ReadPosRankSum=-1.637;VQSLOD=-0.5640;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:9,4:22:31.19:351,31,0	0/0:5,0:5:2.91:0,3,32	0/0:14,0:8:1.67:0,2,17	0/1:10,0:4:16.07:23,0,16	0/0:17,0:13:26.57:0,27,276	0/0:19,0:18:24.06:0,24,258	0/0:15,0:16:42.05:0,42,439	0/0:32,0:29:55.27:0,55,567	1/1:5,0:10:5.95:43,6,0	0/0:12,0:10:11.90:0,12,127	0/1:12,0:10:6.41:6,0,105	1/1:5,1:8:11.99:125,12,0	1/1:2,0:13:8.09:163,8,0	1/1:6,0:11:11.93:90,12,0	0/1:6,1:13:0.36:88,0,0	0/1:5,0:7:0:0,0,0	0/0:31,0:27:53.98:0,54,566	0/1:6,1:15:5.34:178,0,5	1/1:10,0:11:20.91:171,21,0	1/1:14,0:17:17.90:133,18,0	1/1:4,1:14:20.94:190,21,0	1/1:1,0:2:2.99:23,3,0	1/1:2,0:11:17.93:137,18,0	1/1:7,1:16:31.14:272,31,0	1/1:7,0:9:10.21:71,10,0	0/0:15,0:13:29.91:0,30,295	0/0:18,0:13:24.04:0,24,248	0/0:17,0:12:27.07:0,27,291
chr10	15769085	.	CT	C	5217.06	PASS	AB=0.882;AC=31;AF=0.554;AN=56;BaseQRankSum=-5.740;DP=503;FS=1.674;HRun=10;HaplotypeScore=81.7944;InbreedingCoeff=0.9061;MQ=73.91;MQ0=7;MQRankSum=-0.775;QD=19.61;ReadPosRankSum=2.319;VQSLOD=5.6918;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,28:29:77.97:677,78,0	0/0:10,0:10:24.06:0,24,264	0/0:26,0:19:15.16:0,15,258	0/0:26,0:15:21.74:0,22,150	0/0:22,0:22:57.10:0,57,602	0/1:13,2:15:24.69:25,0,197	0/0:11,0:11:33.09:0,33,360	0/0:34,0:32:77.98:0,78,807	1/1:3,13:15:32.99:286,33,0	0/0:19,0:18:49.94:0,50,530	0/0:15,0:15:22.30:0,22,235	1/1:2,18:20:38.98:338,39,0	1/1:1,7:8:14.99:130,15,0	1/1:3,17:20:53.98:468,54,0	1/1:2,8:10:23.99:208,24,0	1/1:1,10:11:26.99:234,27,0	0/0:25,0:24:66.08:0,66,700	1/1:7,19:25:52.39:488,52,0	1/1:7,25:31:41.79:592,42,0	1/1:2,12:14:35.99:312,36,0	1/1:3,13:16:35.98:313,36,0	1/1:1,7:8:21:182,21,0	1/1:0,12:12:32.99:286,33,0	1/1:1,7:8:21:182,21,0	1/1:1,19:20:56.99:495,57,0	0/0:19,0:18:47.72:0,48,504	0/0:22,0:22:50.86:0,51,534	0/0:7,0:5:6.02:0,6,66
chr10	15769100	.	C	CT	3051.54	PASS	AB=0.840;AC=22;AF=0.393;AN=56;BaseQRankSum=-5.883;DP=501;FS=3.290;HRun=10;HaplotypeScore=96.6736;InbreedingCoeff=0.7056;MQ=64.41;MQ0=13;MQRankSum=1.466;QD=12.56;ReadPosRankSum=-2.621;VQSLOD=3.1151;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:33:69.95:0,70,552	1/1:3,7:10:21.05:224,21,0	0/1:18,0:13:12.82:13,0,21	0/1:23,0:12:1.91:2,0,17	1/1:11,12:23:11.74:268,12,0	1/1:1,13:14:27.06:277,27,0	1/1:2,9:11:27.07:288,27,0	1/1:11,17:25:29.45:499,29,0	0/0:17,0:16:32.93:0,33,268	1/1:5,14:18:42.01:415,42,0	0/1:8,4:12:10.03:76,0,10	0/0:16,0:17:28.96:0,29,224	0/0:5,0:5:8.97:0,9,74	0/0:21,0:20:15.91:0,16,334	0/0:10,0:10:17:0,17,129	0/0:11,0:11:17.95:0,18,148	1/1:16,14:27:23.42:435,23,0	0/0:29,0:25:49.71:0,50,399	0/0:28,0:28:42.96:0,43,331	0/0:13,0:14:22.97:0,23,177	0/0:13,0:13:32.96:0,33,270	0/0:9,0:9:23.97:0,24,197	0/0:13,0:13:29.96:0,30,246	0/0:13,0:10:20.98:0,21,172	0/0:21,0:20:41.91:0,42,338	0/1:9,11:19:14.15:308,0,14	1/1:4,17:20:17.46:391,17,0	1/1:7,4:7:6.02:63,6,0
chr10	15771982	.	CA	C	6248.02	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=17.490;DP=701;FS=2.820;HRun=2;HaplotypeScore=80.9382;InbreedingCoeff=0.9973;MQ=88.58;MQ0=0;MQRankSum=-5.660;QD=32.37;ReadPosRankSum=2.478;VQSLOD=4.9588;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:68,0:68:99:0,205,2990	0/0:5,0:5:15.05:0,15,225	0/0:28,0:28:78.24:0,78,1099	0/0:30,0:30:84.15:0,84,1144	0/0:21,0:21:63.21:0,63,943	0/0:15,0:15:39.13:0,39,584	0/0:30,0:30:90.30:0,90,1330	0/0:31,0:31:93.31:0,93,1373	1/1:3,22:25:60.18:720,60,0	0/0:23,0:23:69.23:0,69,1013	0/0:13,0:13:39.12:0,39,566	0/0:30,0:30:90.28:0,90,1309	1/1:1,25:26:66.20:792,66,0	1/1:2,26:28:72.22:864,72,0	0/0:35,0:35:99:0,105,1554	0/0:28,0:28:81.26:0,81,1176	0/0:22,0:22:63.16:0,63,881	0/0:16,0:16:45.15:0,45,674	1/1:2,18:20:54.14:633,54,0	1/1:0,16:16:48.15:576,48,0	1/1:1,34:35:99:1188,99,0	0/0:30,0:30:90.30:0,90,1329	1/1:0,21:21:63.19:756,63,0	1/1:0,22:22:60.18:720,60,0	0/0:27,0:27:75.23:0,75,1101	0/0:22,0:22:63.20:0,63,909	0/0:17,0:17:51.17:0,51,764	0/0:17,0:17:51.17:0,51,758
chr10	15772122	.	GGA	G	1804.30	PASS	AB=1.000;AC=33;AF=0.589;AN=56;BaseQRankSum=-0.757;DP=362;FS=4.505;HRun=0;HaplotypeScore=62.7493;InbreedingCoeff=-0.1235;MQ=92.04;MQ0=0;MQRankSum=-2.280;QD=5.75;ReadPosRankSum=-2.132;VQSLOD=1.6856;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:25,2:27:40.64:227,41,0	0/0:4,0:4:11.23:0,11,65	0/0:18,0:18:37.39:0,37,697	0/0:16,0:16:38.43:0,38,683	0/1:10,0:10:34.31:34,0,47	0/1:7,0:7:36.55:77,0,37	0/1:14,0:14:5.26:5,0,63	1/1:8,0:8:15.30:110,15,0	0/1:7,0:7:29.70:30,0,46	0/1:11,0:11:9.81:120,0,10	0/1:8,0:8:10.42:10,0,12	1/1:17,0:17:19.84:69,20,0	0/1:17,0:17:53:53,0,101	0/1:8,0:8:33.76:34,0,70	1/1:16,0:16:23.31:96,23,0	1/1:21,0:21:30.42:105,30,0	0/1:13,0:13:12.18:12,0,82	1/1:13,3:16:31.36:214,31,0	0/1:9,0:9:39.79:40,0,56	0/1:14,0:14:76.24:88,0,76	0/1:11,0:11:60.70:63,0,61	1/1:19,1:20:24.04:196,24,0	0/1:11,0:11:37.50:102,0,37	0/1:20,0:20:93.35:131,0,93	1/1:16,0:16:17.34:61,17,0	0/1:8,0:8:23.27:34,0,23	0/0:10,0:10:3.39:0,3,34	1/1:5,0:5:2.85:69,3,0
chr10	15772123	.	GA	G	5147.41	PASS	AB=0.900;AC=49;AF=0.875;AN=56;BaseQRankSum=-4.457;DP=363;FS=2.701;HRun=1;HaplotypeScore=47.1970;InbreedingCoeff=0.5362;MQ=92.27;MQ0=0;MQRankSum=-4.575;QD=15.89;ReadPosRankSum=-4.784;VQSLOD=3.0227;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,25:27:46.59:571,47,0	0/0:4,0:4:0.86:0,1,8	0/0:19,0:19:28.46:0,28,584	0/0:16,0:16:38.15:0,38,528	1/1:10,0:10:10.82:64,11,0	1/1:7,0:7:9.25:94,9,0	1/1:15,0:15:17.55:88,18,0	1/1:8,0:8:18.04:137,18,0	1/1:7,0:7:8.54:77,9,0	1/1:10,1:11:20.13:195,20,0	1/1:7,0:7:6.83:44,7,0	1/1:1,16:17:24.08:335,24,0	1/1:17,0:17:25.83:257,26,0	0/1:8,1:9:9.77:63,0,10	1/1:0,16:16:30.08:387,30,0	1/1:0,20:20:39.12:529,39,0	1/1:14,0:14:1.51:61,2,0	1/1:3,13:16:35.96:435,36,0	1/1:8,1:9:5.94:138,6,0	1/1:14,0:14:11.13:132,11,0	1/1:10,1:11:3.98:137,4,0	1/1:11,9:20:49.01:485,49,0	1/1:10,1:11:18.68:193,19,0	1/1:20,0:20:10.03:199,10,0	1/1:0,15:15:21.07:293,21,0	1/1:8,0:8:11.64:92,12,0	1/1:10,0:10:5.06:34,5,0	1/1:5,0:5:14.21:109,14,0
chr10	15774921	.	GTTTCTACTAATAGGACACA	G	30997	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=13.861;DP=531;FS=2.808;HRun=0;HaplotypeScore=276.3699;InbreedingCoeff=0.9901;MQ=75.19;MQ0=0;MQRankSum=-14.774;QD=86.83;ReadPosRankSum=4.844;VQSLOD=4.1924;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,15:20:33.11:1624,33,0	1/1:2,12:14:27.09:1465,27,0	0/0:14,0:15:34.32:0,34,1842	0/0:25,0:23:51.85:0,52,2926	1/1:3,19:22:36.12:1865,36,0	1/1:2,21:23:45.15:2322,45,0	1/1:1,23:24:48.16:2603,48,0	1/1:8,22:30:62.18:1942,62,0	0/0:10,0:10:30.10:0,30,2519	1/1:3,18:21:47.77:1881,48,0	1/1:2,24:26:48.16:2398,48,0	1/1:3,21:24:45.15:2441,45,0	0/0:14,0:14:42.13:0,42,3167	0/0:14,0:14:42.14:0,42,3028	1/1:1,14:15:24.08:1302,24,0	1/1:1,8:9:12.04:651,12,0	1/1:3,14:17:16.82:818,17,0	1/1:5,13:18:15.05:814,15,0	0/0:20,0:20:57.20:0,57,4738	0/0:27,0:27:72.25:0,72,5440	0/0:22,0:22:66.20:0,66,4935	1/1:3,13:16:27.09:1330,27,0	0/0:15,0:15:45.15:0,45,3332	0/0:12,0:12:36.12:0,36,3125	1/1:1,11:12:24.08:1300,24,0	1/1:2,16:18:33.09:1538,33,0	1/1:4,14:18:24.08:1297,24,0	1/1:7,23:30:63.22:3405,63,0
chr10	15775655	.	CG	C	9081.57	PASS	AB=0.553;AC=17;AF=0.304;AN=56;BaseQRankSum=12.576;DP=734;FS=3.346;HRun=1;HaplotypeScore=70.9384;InbreedingCoeff=0.5552;MQ=57.09;MQ0=16;MQRankSum=0.585;QD=33.14;ReadPosRankSum=-0.836;VQSLOD=4.3375;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,154,2442	0/1:3,8:11:41.98:305,0,42	0/0:11,0:4:11.40:0,11,148	0/0:21,0:9:21.04:0,21,279	1/1:2,14:15:1.67:466,2,0	1/1:0,14:14:42.14:586,42,0	0/1:5,33:38:99:1153,0,132	0/1:10,25:32:99:826,0,220	0/0:23,0:23:66.22:0,66,1044	0/1:3,22:25:74.68:770,0,75	0/1:2,14:15:5.02:503,0,5	0/0:30,0:30:90.31:0,90,1431	0/0:23,0:23:69.24:0,69,1091	0/0:24,0:24:72.23:0,72,1123	0/0:32,0:32:93.29:0,93,1430	0/0:22,0:22:66.23:0,66,1050	1/1:0,45:45:99:1804,129,0	0/0:21,0:21:63.21:0,63,1005	0/0:22,0:15:45.15:0,45,714	0/0:16,0:16:42.14:0,42,666	0/0:74,0:73:99:0,211,3288	0/0:11,0:11:33.11:0,33,526	0/0:21,0:21:57.18:0,57,886	0/0:35,0:35:99:0,102,1627	0/0:20,0:20:54.13:0,54,810	1/1:2,22:23:21.30:872,21,0	1/1:1,21:22:54.18:755,54,0	1/1:1,27:28:33.37:1042,33,0
chr10	15775824	.	GTC	G	4855.79	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=14.212;DP=725;FS=0.774;HRun=0;HaplotypeScore=104.9370;InbreedingCoeff=0.9955;MQ=68.14;MQ0=14;MQRankSum=0.794;QD=25.03;ReadPosRankSum=3.897;VQSLOD=5.6723;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:46:99:0,117,1880	0/0:10,0:10:21.05:0,21,323	0/0:50,0:23:38.20:0,38,530	0/0:92,0:38:37.43:0,37,503	0/0:23,0:23:63.22:0,63,1059	0/0:16,0:16:45.14:0,45,724	0/0:24,0:24:63.20:0,63,1038	0/0:39,0:39:99:0,102,1554	1/1:1,16:17:42.14:546,42,0	0/0:28,0:28:75.24:0,75,1231	0/0:7,0:7:21.07:0,21,355	0/0:27,0:27:72.22:0,72,1197	1/1:3,21:23:46.51:764,47,0	1/1:1,19:20:45.15:590,45,0	0/0:18,0:18:51.17:0,51,856	0/0:13,0:13:30.09:0,30,476	0/0:23,0:23:66.19:0,66,1063	0/0:19,0:20:57.14:0,57,918	1/1:7,17:21:45.05:514,45,0	1/1:0,10:10:15.05:197,15,0	1/1:7,31:38:66.21:867,66,0	0/0:20,0:20:60.19:0,60,950	1/1:1,14:15:27.09:353,27,0	1/1:4,40:44:78.17:1024,78,0	0/0:23,0:23:66.21:0,66,1084	0/0:24,0:24:63.20:0,63,1018	0/0:18,0:18:51.17:0,51,854	0/0:9,0:9:27.09:0,27,462
chr10	15776342	.	T	TG	4958.43	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=0.497;DP=288;FS=1.035;HRun=4;HaplotypeScore=45.2322;InbreedingCoeff=0.9351;MQ=78.20;MQ0=0;MQRankSum=-2.858;QD=30.99;ReadPosRankSum=0.587;VQSLOD=4.7275;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,14:15:39.09:533,39,0	1/1:1,3:4:9.03:123,9,0	0/0:14,0:13:30.08:0,30,328	0/0:17,0:16:32.92:0,33,341	1/1:1,4:5:12.04:163,12,0	1/1:1,5:6:12.04:164,12,0	1/1:2,8:10:24.08:328,24,0	1/1:0,9:9:24.06:310,24,0	0/0:7,0:7:15.04:0,15,170	1/1:0,3:3:9.03:123,9,0	1/1:0,8:8:9.03:123,9,0	1/1:1,12:13:27.09:362,27,0	0/0:13,0:13:33.09:0,33,374	0/0:18,0:18:51.15:0,51,578	1/1:3,10:13:27.09:369,27,0	1/1:1,9:10:24.08:328,24,0	1/1:5,16:21:51.17:688,51,0	1/1:1,12:13:27.09:369,27,0	0/0:9,0:9:21.06:0,21,238	0/0:8,0:8:21.06:0,21,238	0/0:25,0:25:66.19:0,66,749	1/1:1,5:6:9.03:123,9,0	0/0:5,0:5:12.03:0,12,136	0/0:12,0:12:36.10:0,36,407	1/1:0,4:4:12.04:164,12,0	1/1:2,8:10:19.46:318,19,0	1/1:0,6:6:15.05:205,15,0	1/1:0,4:4:12.04:164,12,0
chr10	15776672	.	AAAAC	A	750.94	PASS	AB=0.982;AC=23;AF=0.411;AN=56;BaseQRankSum=-6.279;DP=510;FS=0.000;HRun=0;HaplotypeScore=165.2699;InbreedingCoeff=-0.6203;MQ=24.87;MQ0=53;MQRankSum=0.577;QD=1.88;ReadPosRankSum=-8.161;VQSLOD=0.0922;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:22:6.82:7,0,122	0/0:7,0:7:4.14:0,4,134	0/1:46,0:2:11.60:12,0,15	0/0:47,0:4:2.63:0,3,15	0/1:18,0:15:44.95:45,0,190	0/1:16,0:15:62.51:63,0,168	0/1:14,0:11:39.41:39,0,55	0/1:24,1:22:98.26:98,0,174	0/1:16,0:15:34.73:35,0,261	0/1:27,0:23:63.93:64,0,293	0/1:16,0:11:26.88:27,0,95	0/1:12,0:12:32.22:32,0,91	0/1:12,1:11:11.95:12,0,120	0/1:13,0:13:7.14:7,0,169	0/1:13,0:12:4.94:5,0,109	1/1:15,0:14:6.73:42,7,0	0/1:16,3:15:55.29:55,0,82	0/1:16,0:12:30.50:31,0,68	0/1:19,1:13:9.88:10,0,216	0/1:11,0:11:29.66:30,0,145	0/1:5,0:4:10.89:11,0,29	0/1:12,0:11:54.55:55,0,62	0/0:10,1:10:0.98:0,1,149	0/0:17,0:13:1.84:0,2,137	0/0:18,0:16:1.73:0,2,66	0/1:25,0:20:67.73:68,0,101	0/1:21,2:18:82.71:151,0,83	0/0:9,0:8:10.83:0,11,106
chr10	15776673	.	AAAC	A	964.41	PASS	AB=0.984;AC=25;AF=0.446;AN=56;BaseQRankSum=-5.648;DP=506;FS=5.341;HRun=0;HaplotypeScore=159.2743;InbreedingCoeff=-0.6249;MQ=24.89;MQ0=53;MQRankSum=1.233;QD=2.30;ReadPosRankSum=-8.226;VQSLOD=-0.1107;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:21:7.38:7,0,74	0/0:7,0:7:7.44:0,7,74	0/1:48,0:3:3.24:3,0,14	0/0:49,0:4:2.60:0,3,15	0/1:18,0:15:62.82:63,0,84	0/1:15,0:14:73:73,0,108	0/1:16,0:13:20.61:63,0,21	0/1:24,1:22:91.61:108,0,92	0/1:15,1:15:15.13:15,0,136	0/1:27,1:23:99:129,0,144	0/1:15,1:11:38.56:39,0,47	0/1:12,0:12:44.55:49,0,45	0/1:11,0:9:2.63:3,0,71	0/1:13,0:13:2.58:3,0,107	0/1:13,0:12:5.45:5,0,59	1/1:15,0:14:7.39:50,7,0	0/1:18,0:15:40.87:55,0,41	0/1:16,0:12:28.34:28,0,48	0/0:20,0:13:5.14:0,5,116	0/1:10,1:11:30.59:31,0,81	0/1:5,0:4:11.07:11,0,22	0/1:12,0:11:38.77:56,0,39	0/0:10,0:9:0.40:0,0,87	0/1:16,0:13:3.05:3,0,62	0/1:17,0:15:7.59:8,0,48	0/1:21,1:17:47.51:70,0,48	0/1:22,1:18:19.43:218,0,19	0/1:10,0:9:20.18:20,0,39
chr10	15776674	.	A	AC	898.92	PASS	AB=0.987;AC=26;AF=0.464;AN=56;BaseQRankSum=2.303;DP=505;FS=4.582;HRun=0;HaplotypeScore=151.9390;InbreedingCoeff=-0.5518;MQ=24.88;MQ0=53;MQRankSum=-0.555;QD=2.37;ReadPosRankSum=3.266;VQSLOD=2.6573;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:22,1:21:58.39:58,0,71	0/1:7,0:7:15.14:52,0,15	0/0:48,0:3:8.54:0,9,48	0/0:50,0:4:2.99:0,3,23	0/1:18,0:15:42.07:81,0,42	0/1:15,0:14:39.13:39,0,93	0/0:15,0:13:8.88:0,9,65	0/1:25,0:22:85.04:85,0,96	0/1:16,0:15:31.76:72,0,32	0/1:29,0:23:67.92:110,0,68	0/1:16,0:11:20.25:51,0,20	0/1:12,0:12:23.61:24,0,38	0/1:11,0:9:16.50:17,0,48	0/1:12,1:13:29.54:30,0,43	0/1:13,0:12:24.23:24,0,29	0/1:14,1:14:1.24:1,0,56	0/1:17,0:15:8.92:44,0,9	0/1:14,1:12:17.24:17,0,70	0/1:19,1:13:5.92:85,0,6	0/1:11,0:11:35.84:36,0,52	1/1:5,0:4:8.22:41,8,0	0/0:12,0:11:8.98:0,9,86	0/1:10,0:9:17.67:30,0,18	1/1:16,0:13:7.62:73,8,0	0/1:17,0:15:12.57:13,0,13	0/1:22,0:17:37.95:53,0,38	0/1:22,0:18:14.54:15,0,85	0/1:9,0:8:2.25:2,0,43
chr10	15776676	.	C	CAAACAA	5573.23	PASS	AB=0.779;AC=40;AF=0.714;AN=56;BaseQRankSum=1.488;DP=532;FS=0.612;HRun=0;HaplotypeScore=195.2847;InbreedingCoeff=-0.0478;MQ=25.40;MQ0=52;MQRankSum=-1.066;QD=13.02;ReadPosRankSum=0.758;VQSLOD=4.2548;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:23:11.21:346,11,0	0/1:3,0:6:10.57:139,0,11	0/0:50,0:4:8.34:0,8,81	0/0:54,0:5:5.98:0,6,74	0/1:13,0:16:14.10:223,0,14	0/1:12,0:15:45.24:147,0,45	0/1:16,0:16:7.89:140,0,8	1/1:13,0:23:18.24:291,18,0	1/1:10,0:16:20.88:228,21,0	1/1:21,0:25:36.98:372,37,0	1/1:14,0:15:9.04:317,9,0	0/1:9,0:12:12.21:215,0,12	0/1:7,0:10:4.92:90,0,5	1/1:10,0:14:16.20:113,16,0	0/1:8,0:10:38.53:190,0,39	0/1:8,1:16:2.15:139,0,2	1/1:16,0:16:18.95:236,19,0	0/1:14,0:13:36.03:72,0,36	1/1:19,0:14:1.25:205,1,0	0/1:10,0:12:0.42:113,0,0	1/1:4,0:4:8.92:76,9,0	1/1:9,0:11:9.01:232,9,0	1/1:7,0:10:9.33:126,9,0	0/1:9,0:13:1.11:175,0,1	1/1:6,0:18:29.75:511,30,0	1/1:19,0:18:33.14:555,33,0	1/1:21,0:18:31.52:286,32,0	0/1:6,0:6:8.74:34,0,9
chr10	15776702	.	C	CA	2715.37	PASS	AB=0.939;AC=39;AF=0.696;AN=56;BaseQRankSum=1.606;DP=458;FS=2.390;HRun=7;HaplotypeScore=169.0882;InbreedingCoeff=0.4172;MQ=34.53;MQ0=20;MQRankSum=-0.918;QD=8.01;ReadPosRankSum=0.714;VQSLOD=0.2814;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:9,0:9:1.82:5,2,0	1/1:9,0:9:6.44:74,6,0	0/0:47,0:16:42.59:0,43,483	0/0:46,0:7:9.09:0,9,138	1/1:21,5:24:18.83:212,19,0	1/1:12,3:15:16.69:163,17,0	0/1:19,2:19:0.54:122,0,1	0/1:20,2:20:23.23:59,0,23	1/1:9,7:16:28.47:287,28,0	1/1:28,2:26:9.74:199,10,0	1/1:17,0:14:10.96:91,11,0	0/1:12,0:12:0.58:1,0,1	1/1:3,2:5:11.75:90,12,0	1/1:10,4:14:26.26:226,26,0	1/1:8,0:8:2.49:9,2,0	0/0:9,0:9:0.97:0,1,2	0/1:16,0:14:24.26:24,0,31	0/0:6,0:5:1.81:0,2,4	1/1:7,5:10:29.72:255,30,0	1/1:7,4:11:22.51:214,23,0	1/1:2,7:8:12.02:124,12,0	0/0:5,0:5:0.80:0,1,2	1/1:8,6:14:30.59:252,31,0	1/1:6,5:11:8.85:180,9,0	1/1:15,0:15:6.89:24,7,0	0/1:16,2:16:3.18:81,0,3	1/1:22,2:20:8.57:170,9,0	0/0:6,0:6:4.50:0,5,16
chr10	15776703	.	AAAC	A	1452.53	PASS	AB=0.992;AC=22;AF=0.393;AN=56;BaseQRankSum=-2.321;DP=459;FS=7.557;HRun=0;HaplotypeScore=180.2947;InbreedingCoeff=0.3008;MQ=35.16;MQ0=18;MQRankSum=-1.465;QD=6.43;ReadPosRankSum=-4.106;VQSLOD=1.3493;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:1.54:0,2,33	0/1:9,0:9:0.69:1,0,96	0/0:45,0:17:45.15:0,45,890	0/0:45,0:8:12.14:0,12,267	0/1:28,0:25:20.85:21,0,195	0/1:16,0:15:11.66:12,0,153	0/0:21,0:19:31.85:0,32,208	0/0:22,0:20:31.45:0,31,260	0/1:14,1:15:0.69:252,0,1	0/1:32,0:27:16.22:16,0,313	0/1:18,0:14:0.05:0,0,119	0/0:12,0:12:27.27:0,27,187	1/1:5,1:6:2.48:105,2,0	1/1:13,2:15:12.44:217,12,0	0/0:7,0:7:10.71:0,11,63	0/0:9,0:9:8.38:0,8,68	0/0:16,0:14:1.42:0,1,141	0/0:7,0:6:0.04:0,0,54	1/1:9,3:10:29.07:328,29,0	1/1:8,3:11:5.97:223,6,0	1/1:9,0:8:9.48:98,9,0	0/1:5,0:5:15.18:15,0,69	1/1:15,0:15:11.22:187,11,0	1/1:10,1:11:0.96:135,1,0	0/0:15,0:15:12.89:0,13,132	0/0:19,0:16:20.83:0,21,144	0/1:24,0:20:11.75:12,0,196	0/0:6,0:6:16.73:0,17,123
chr10	15776705	.	AC	A	3458.04	PASS	AB=0.965;AC=49;AF=0.875;AN=56;BaseQRankSum=4.178;DP=434;FS=1.485;HRun=1;HaplotypeScore=158.2214;InbreedingCoeff=0.4191;MQ=38.04;MQ0=18;MQRankSum=-3.170;QD=9.85;ReadPosRankSum=1.652;VQSLOD=1.6070;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,0:8:2.37:8,2,0	1/1:6,2:9:17.40:92,17,0	0/0:40,0:18:48.14:0,48,664	0/0:43,0:8:12.66:0,13,211	1/1:25,2:24:52.96:327,53,0	1/1:16,0:15:18.15:121,18,0	1/1:17,2:17:12.20:112,12,0	0/1:15,2:16:14.86:92,0,15	1/1:13,0:13:34.48:314,34,0	1/1:29,0:24:39.90:254,40,0	1/1:18,1:15:23.51:145,24,0	1/1:12,0:12:5.01:21,5,0	0/1:6,0:6:1.59:40,0,2	1/1:15,0:15:27.83:246,28,0	1/1:7,0:7:2.37:8,2,0	1/1:9,0:9:3.77:14,4,0	1/1:14,1:13:7.61:100,8,0	1/1:7,0:6:6.34:45,6,0	1/1:12,0:10:29.60:246,30,0	1/1:12,0:12:26:233,26,0	1/1:9,0:8:16.03:128,16,0	1/1:5,0:5:7.77:48,8,0	1/1:14,0:14:30:212,30,0	1/1:8,1:9:23.02:226,23,0	1/1:15,0:15:14.65:99,15,0	1/1:18,0:16:18.03:171,18,0	1/1:22,0:19:26.56:141,27,0	0/1:6,0:6:5.74:14,0,6
chr10	15776709	.	AC	A	4149.72	PASS	AB=1.000;AC=49;AF=0.875;AN=56;BaseQRankSum=3.109;DP=432;FS=1.488;HRun=1;HaplotypeScore=156.4699;InbreedingCoeff=0.5063;MQ=44.85;MQ0=13;MQRankSum=-4.450;QD=11.62;ReadPosRankSum=1.095;VQSLOD=2.2378;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:5,0:5:0:0,0,0	1/1:9,0:9:17.15:90,17,0	0/0:33,5:20:44.31:0,44,678	0/0:33,2:9:13.19:0,13,249	1/1:28,1:26:58.75:372,59,0	1/1:17,0:16:25.19:163,25,0	1/1:18,0:16:10.05:97,10,0	0/1:17,0:16:13.06:99,0,13	1/1:7,6:13:37.70:338,38,0	1/1:30,0:27:49.24:327,49,0	1/1:19,0:17:27.06:164,27,0	1/1:13,0:13:8.91:50,9,0	1/1:6,1:7:17.28:107,17,0	1/1:10,7:17:47.43:389,47,0	1/1:8,0:8:5:26,5,0	1/1:10,0:10:7.97:42,8,0	1/1:13,1:12:2.24:78,2,0	1/1:8,0:7:5.90:44,6,0	1/1:7,5:10:29.62:259,30,0	1/1:8,4:12:32.55:278,33,0	1/1:2,6:8:20.33:179,20,0	1/1:6,0:6:7.77:48,8,0	1/1:5,8:13:37.95:292,38,0	1/1:6,5:11:26.22:272,26,0	1/1:16,0:16:14.65:99,15,0	1/1:18,0:15:19.75:182,20,0	1/1:20,0:17:25.14:140,25,0	0/1:6,0:6:2.45:15,0,2
chr10	15776713	.	AC	A	4703.25	PASS	AB=1.000;AC=49;AF=0.875;AN=56;BaseQRankSum=2.515;DP=434;FS=3.515;HRun=1;HaplotypeScore=154.9467;InbreedingCoeff=0.5899;MQ=48.12;MQ0=7;MQRankSum=-3.650;QD=12.64;ReadPosRankSum=-1.154;VQSLOD=3.4350;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:6,0:6:0:0,0,0	1/1:10,0:10:20.91:116,21,0	0/0:31,2:20:47.16:0,47,646	0/0:27,1:8:22.27:0,22,269	1/1:30,0:27:48.39:321,48,0	1/1:18,0:17:29.02:187,29,0	1/1:18,0:16:23.78:135,24,0	0/1:19,0:18:3.79:140,0,4	1/1:6,6:12:34.92:325,35,0	1/1:32,0:30:58.83:402,59,0	1/1:16,0:14:29.07:169,29,0	1/1:15,1:16:18.04:128,18,0	1/1:5,1:6:14.63:95,15,0	1/1:12,6:18:47.40:389,47,0	1/1:7,0:7:2.97:20,3,0	1/1:13,0:13:9.73:46,10,0	1/1:10,3:12:7.70:119,8,0	1/1:8,0:7:5.35:45,5,0	1/1:9,5:13:33.39:290,33,0	1/1:10,4:14:35.54:304,36,0	1/1:2,6:8:20.95:195,21,0	1/1:9,0:9:13.47:98,13,0	1/1:7,7:14:41.21:333,41,0	1/1:7,5:12:29.74:292,30,0	1/1:16,0:16:14.65:99,15,0	1/1:18,0:15:21.25:204,21,0	1/1:19,1:18:37.45:235,37,0	0/1:5,0:5:1.50:16,0,1
chr10	15777198	.	C	CCAAA	10411.97	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=3.279;DP=716;FS=3.722;HRun=0;HaplotypeScore=125.3966;InbreedingCoeff=0.9854;MQ=73.92;MQ0=1;MQRankSum=-1.169;QD=39.29;ReadPosRankSum=-2.219;VQSLOD=4.5955;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:96.27:0,96,1509	1/1:7,9:16:18.06:440,18,0	0/0:40,0:30:26.10:0,26,447	0/0:38,0:36:37.20:0,37,515	1/1:7,10:18:33.07:709,33,0	1/1:3,10:14:27.09:660,27,0	1/1:9,12:21:18.06:440,18,0	1/1:18,10:30:39.11:829,39,0	0/0:21,0:21:51.13:0,51,763	1/1:19,18:40:67.37:1340,67,0	1/1:5,15:21:48.08:1043,48,0	0/0:17,0:17:42.14:0,42,690	0/0:27,0:27:66.23:0,66,1084	0/0:21,0:21:39.13:0,39,641	0/0:27,0:27:57.18:0,57,889	0/0:24,0:24:54.17:0,54,863	1/1:10,18:29:57.20:1390,57,0	0/0:31,0:31:66.19:0,66,1021	0/0:19,0:19:24.07:0,24,356	0/0:15,0:15:21.06:0,21,321	0/0:32,0:32:78.24:0,78,1252	0/0:28,0:28:66.21:0,66,1059	0/0:20,0:20:45.10:0,45,686	0/0:22,0:22:57.19:0,57,937	0/0:23,0:23:45.15:0,45,740	1/1:9,17:28:57.20:1339,57,0	1/1:11,20:34:7.66:1270,8,0	1/1:1,13:14:39.13:953,39,0
chr10	15777831	.	TCA	T	8691.66	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=16.627;DP=750;FS=0.963;HRun=0;HaplotypeScore=175.6730;InbreedingCoeff=1.0000;MQ=62.44;MQ0=0;MQRankSum=-5.067;QD=39.15;ReadPosRankSum=2.704;VQSLOD=5.3889;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,126,2329	0/0:20,0:20:60.21:0,60,1123	0/0:21,0:15:38.87:0,39,637	0/0:31,0:23:52:0,52,915	0/0:30,0:30:87.30:0,87,1614	0/0:33,0:33:99:0,99,1839	0/0:22,0:22:57.18:0,57,1036	0/0:30,0:30:87.27:0,87,1524	1/1:1,22:23:63.21:927,63,0	0/0:28,0:28:84.28:0,84,1523	0/0:25,0:25:75.26:0,75,1403	0/0:33,0:33:99:0,99,1853	1/1:0,35:35:93.31:1369,93,0	1/1:0,19:19:57.19:839,57,0	0/0:29,0:29:87.28:0,87,1582	0/0:27,1:28:40.10:0,40,1473	0/0:25,0:25:72.25:0,72,1349	0/0:23,0:22:66.23:0,66,1218	1/1:5,25:29:75.25:1102,75,0	1/1:0,23:23:66.22:971,66,0	1/1:2,41:43:99:1633,111,0	0/0:26,0:26:72.25:0,72,1317	1/1:0,18:18:48.16:705,48,0	1/1:0,31:31:77.95:1146,78,0	0/0:20,0:20:60.21:0,60,1124	0/0:26,0:26:75.25:0,75,1376	0/0:17,0:17:51.17:0,51,955	0/0:18,0:18:54.19:0,54,1011
chr10	15778767	.	GT	G	9939.21	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=15.903;DP=499;FS=4.800;HRun=4;HaplotypeScore=76.0715;InbreedingCoeff=0.9713;MQ=69.56;MQ0=0;MQRankSum=-2.283;QD=30.40;ReadPosRankSum=2.724;VQSLOD=5.3546;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,13:16:2.98:351,3,0	1/1:0,7:7:18.05:210,18,0	0/0:10,0:10:27.05:0,27,354	0/0:8,0:8:20.01:0,20,268	1/1:3,20:23:55.03:618,55,0	1/1:0,23:23:69.21:805,69,0	1/1:0,13:13:39.12:457,39,0	1/1:3,28:30:81.67:907,82,0	0/0:9,0:9:24.08:0,24,336	1/1:1,21:22:63.19:733,63,0	1/1:0,25:25:72.10:777,72,0	1/1:0,9:9:27.08:309,27,0	0/0:13,0:13:39.13:0,39,546	0/0:13,0:13:39.13:0,39,546	1/1:1,14:15:36.10:416,36,0	1/1:0,11:11:33.09:378,33,0	1/1:2,22:24:57.16:656,57,0	1/1:1,18:19:48.61:561,49,0	0/0:26,0:26:75.22:0,75,1001	0/0:40,0:40:99:0,120,1661	0/0:18,0:18:51.17:0,51,712	1/1:0,16:16:42.12:487,42,0	0/0:24,0:24:69.22:0,69,947	0/0:11,0:11:33.11:0,33,462	1/1:1,18:19:46.50:548,46,0	1/1:4,23:27:69.20:805,69,0	1/1:0,9:9:27.04:294,27,0	1/1:0,18:18:54.16:626,54,0
chr10	15779290	.	A	AT	3591.31	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-6.866;DP=509;FS=1.345;HRun=7;HaplotypeScore=81.8664;InbreedingCoeff=0.9766;MQ=67.86;MQ0=1;MQRankSum=0.364;QD=31.78;ReadPosRankSum=0.634;VQSLOD=3.1719;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:90.12:0,90,858	0/0:18,0:18:51.08:0,51,492	0/0:22,0:16:23.65:0,24,186	0/0:16,0:9:5.26:0,5,98	0/0:22,0:22:66.11:0,66,637	0/0:18,0:18:51.07:0,51,487	0/0:13,0:13:39.05:0,39,370	0/0:26,0:26:60.04:0,60,567	1/1:2,13:15:36.11:435,36,0	0/0:20,0:20:54.06:0,54,510	0/0:18,0:18:54.08:0,54,516	0/0:17,0:17:48.06:0,48,458	1/1:0,6:6:15.05:181,15,0	1/1:0,13:13:33.10:399,33,0	0/0:22,0:22:57.09:0,57,550	0/0:16,0:15:48.08:0,48,463	0/0:33,0:33:84.10:0,84,802	0/0:19,0:19:51.06:0,51,484	1/1:3,19:22:57.17:689,57,0	1/1:3,16:19:51.11:593,51,0	1/1:0,9:9:27.08:326,27,0	0/0:12,0:12:36.06:0,36,347	1/1:0,18:19:54.16:642,54,0	1/1:0,10:10:27.08:326,27,0	0/0:15,0:15:39.05:0,39,371	0/0:22,0:22:57.09:0,57,550	0/0:22,0:22:54.08:0,54,521	0/0:14,0:14:36.06:0,36,348
chr10	15780999	.	GAA	G	5045.22	PASS	AB=1.000;AC=48;AF=0.857;AN=56;BaseQRankSum=-3.992;DP=471;FS=3.170;HRun=3;HaplotypeScore=153.1265;InbreedingCoeff=0.4687;MQ=42.61;MQ0=7;MQRankSum=5.210;QD=11.47;ReadPosRankSum=8.367;VQSLOD=1.3714;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:20:4.78:163,5,0	0/1:6,0:6:0.76:62,0,1	0/0:8,0:2:3:0,3,25	0/0:10,0:4:11.99:0,12,107	1/1:19,0:19:23.10:214,23,0	1/1:15,1:16:19.78:211,20,0	0/0:0,12:12:2.44:0,2,6	1/1:26,0:25:28.88:252,29,0	1/1:21,3:23:35.54:283,36,0	1/1:15,0:15:27.21:202,27,0	1/1:12,0:12:24.86:200,25,0	1/1:17,1:18:17.75:198,18,0	1/1:22,4:20:46.01:336,46,0	1/1:17,3:19:20.44:184,20,0	0/1:15,0:15:9.64:137,0,10	1/1:10,0:10:9.87:116,10,0	1/1:14,2:16:16.67:191,17,0	1/1:18,0:18:9.93:200,10,0	1/1:19,3:20:1.73:197,2,0	1/1:17,1:15:13.27:143,13,0	1/1:15,0:14:23.79:194,24,0	1/1:19,0:19:23.32:239,23,0	1/1:20,2:21:11.96:134,12,0	1/1:13,3:14:20.17:146,20,0	1/1:12,0:12:1.27:102,1,0	1/1:22,0:22:59.02:476,59,0	1/1:17,1:18:30.12:253,30,0	1/1:14,0:14:33.15:213,33,0
chr10	15781013	.	G	GAC	1116.59	PASS	AB=0.976;AC=13;AF=0.250;AN=52;BaseQRankSum=-2.301;DP=449;FS=10.186;HRun=0;HaplotypeScore=172.5327;InbreedingCoeff=0.2430;MQ=38.54;MQ0=12;MQRankSum=1.048;QD=5.34;ReadPosRankSum=3.281;VQSLOD=2.6267;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:20.85:0,21,154	0/0:3,0:3:2.88:0,3,15	./.	./.	0/0:15,0:15:17.96:0,18,146	0/0:18,0:18:23.88:0,24,187	0/0:12,0:12:2.87:0,3,19	0/0:34,0:32:59.46:0,59,450	1/1:28,0:26:21.57:255,22,0	0/0:14,0:13:13.91:0,14,187	0/0:9,0:9:14.97:0,15,121	0/0:20,0:19:26.43:0,26,190	1/1:16,5:15:7.63:294,8,0	0/1:20,1:19:11.51:186,0,12	0/0:13,0:13:17.89:0,18,135	0/0:9,0:9:17.93:0,18,147	0/0:13,0:12:12.25:0,12,134	0/1:15,0:15:12.68:13,0,111	0/1:35,0:34:99:102,0,227	0/1:18,0:15:7.97:56,0,8	0/1:12,0:11:10.84:41,0,11	0/0:13,0:13:12.46:0,12,100	0/1:24,3:26:5.06:92,0,5	1/1:13,2:13:15.91:210,16,0	0/0:11,0:11:9.88:0,10,78	0/0:18,0:17:32.43:0,32,346	0/1:16,0:16:25.89:26,0,103	0/0:15,0:14:2.22:0,2,149
chr10	15781017	.	G	GAC	295.69	PASS	AB=0.940;AC=9;AF=0.173;AN=52;BaseQRankSum=-0.751;DP=428;FS=0.697;HRun=0;HaplotypeScore=172.2574;InbreedingCoeff=-0.0804;MQ=37.54;MQ0=13;MQRankSum=-2.432;QD=2.29;ReadPosRankSum=4.228;VQSLOD=2.5038;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:17:14.92:0,15,113	1/1:0,2:2:2.75:17,3,0	./.	./.	0/0:13,0:13:12.45:0,12,98	0/0:16,2:18:23.85:0,24,184	0/0:12,0:12:2.87:0,3,19	0/1:31,0:29:4.18:4,0,305	0/0:29,0:27:2.72:0,3,42	0/1:14,1:13:43.23:43,0,157	0/0:8,0:8:14.97:0,15,121	0/0:18,0:17:20.67:0,21,141	0/1:22,0:16:24.66:25,0,69	0/0:23,0:21:9.89:0,10,99	0/0:13,0:13:17.12:0,17,111	0/0:7,0:7:11.94:0,12,98	0/0:12,0:11:8.31:0,8,95	0/0:14,0:14:3.18:0,3,80	0/0:35,0:34:58.58:0,59,368	0/0:18,0:16:12.11:0,12,58	0/0:11,0:10:2.27:0,2,14	0/0:13,0:13:9.46:0,9,76	0/0:27,0:25:4.80:0,5,55	0/1:15,0:13:0.11:0,0,15	0/0:10,0:10:6.88:0,7,53	0/1:16,0:15:35.65:36,0,216	0/1:10,3:13:58.50:172,0,59	0/1:12,3:14:99:119,0,128
chr10	15781041	.	GAC	G	932.29	PASS	AB=0.976;AC=35;AF=0.648;AN=54;BaseQRankSum=2.109;DP=334;FS=1.760;HRun=0;HaplotypeScore=121.2014;InbreedingCoeff=0.2283;MQ=38.17;MQ0=13;MQRankSum=-1.343;QD=3.41;ReadPosRankSum=-0.169;VQSLOD=2.7804;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:8,0:7:2.84:14,3,0	1/1:2,0:2:0.89:2,1,0	1/1:15,2:4:7.09:27,7,0	0/0:29,1:7:18.25:0,18,170	0/1:5,0:5:0:0,0,0	0/0:10,0:10:5.13:0,5,24	0/0:8,0:8:2.76:0,3,13	0/1:13,0:12:33.05:33,0,90	1/1:16,9:23:0.97:111,1,0	0/1:5,0:4:1.35:15,0,1	0/1:5,0:5:0:0,0,0	1/1:11,0:10:2.99:24,3,0	1/1:17,3:14:15.94:140,16,0	1/1:13,6:17:11.91:88,12,0	0/1:9,0:9:9.82:10,0,16	0/1:3,0:3:0:0,0,0	0/0:7,0:7:6.18:0,6,32	1/1:6,1:7:0.43:53,0,0	0/1:23,2:23:14.63:175,0,15	1/1:14,1:13:11.43:79,11,0	0/1:14,2:16:0:0,0,0	./.	0/1:23,2:24:0.32:39,0,0	1/1:9,1:9:2.71:21,3,0	0/1:7,0:7:0:0,0,0	1/1:8,0:7:15.67:87,16,0	0/1:9,0:9:3.91:23,0,4	1/1:9,0:9:11.78:122,12,0
chr10	15781053	.	G	GAC	901.66	PASS	AB=0.931;AC=14;AF=0.269;AN=52;BaseQRankSum=-0.369;DP=365;FS=8.754;HRun=0;HaplotypeScore=123.4360;InbreedingCoeff=0.4326;MQ=51.71;MQ0=13;MQRankSum=-0.136;QD=5.40;ReadPosRankSum=3.334;VQSLOD=2.6501;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:5:2.92:0,3,17	0/0:1,0:1:0:0,0,0	0/0:33,0:16:10.09:0,10,187	0/0:53,0:20:25.65:0,26,328	0/0:4,0:4:0:0,0,0	0/0:7,0:7:6.49:0,6,80	0/0:9,0:9:8.85:0,9,74	0/0:16,0:15:31.16:0,31,326	0/1:18,6:24:36.83:131,0,37	0/0:6,0:5:11.87:0,12,82	0/1:5,0:5:0:0,0,0	0/0:10,0:9:0:0,0,0	1/1:14,6:14:4.17:178,4,0	1/1:12,10:20:10.27:147,10,0	./.	0/0:4,0:4:0:0,0,0	0/1:5,0:5:0:0,0,0	0/0:6,0:6:7.71:0,8,44	0/1:12,1:21:99:297,0,133	1/1:12,4:15:15.94:266,16,0	1/1:6,22:29:1.48:4,1,0	./.	1/1:14,7:20:1.55:6,2,0	0/0:7,3:9:0.86:0,1,2	0/0:3,0:3:0:0,0,0	0/0:3,0:3:8.96:0,9,76	0/0:11,0:11:20.39:0,20,132	0/0:5,0:5:12.71:0,13,85
chr10	15781055	.	GAC	G	1206.62	PASS	AB=0.965;AC=35;AF=0.729;AN=48;BaseQRankSum=2.019;DP=354;FS=17.157;HRun=0;HaplotypeScore=119.8292;InbreedingCoeff=0.2611;MQ=55.78;MQ0=13;MQRankSum=-0.331;QD=4.45;ReadPosRankSum=0.230;VQSLOD=1.5847;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,1:4:2.98:21,3,0	./.	0/1:34,0:17:4.29:4,0,121	0/0:55,0:22:14.79:0,15,315	0/1:4,0:4:0:0,0,0	0/0:6,1:7:6.49:0,6,70	1/1:9,0:9:8.72:50,9,0	0/1:13,0:12:44.44:44,0,114	1/1:17,9:24:2.43:121,2,0	1/1:6,0:5:11.01:63,11,0	0/0:4,0:4:0:0,0,0	1/1:6,1:6:2.96:19,3,0	1/1:15,4:13:9.62:122,10,0	1/1:16,6:20:11.91:89,12,0	./.	1/1:3,1:4:2.94:18,3,0	0/0:4,1:5:0.47:0,0,1	1/1:5,1:6:14.88:114,15,0	0/1:19,2:19:38.56:223,0,39	1/1:15,1:15:14.32:100,14,0	1/1:29,1:30:3.96:47,4,0	./.	0/1:19,2:20:1.69:19,0,2	1/1:8,1:8:2.65:16,3,0	./.	1/1:0,3:3:8.96:103,9,0	1/1:11,0:11:12.76:60,13,0	1/1:4,1:5:14.67:101,15,0
chr10	15781061	.	GAC	G	1302.32	PASS	AB=1.000;AC=38;AF=0.792;AN=48;BaseQRankSum=1.888;DP=340;FS=13.584;HRun=0;HaplotypeScore=121.9459;InbreedingCoeff=0.3521;MQ=62.23;MQ0=11;MQRankSum=-1.761;QD=5.71;ReadPosRankSum=0.742;VQSLOD=2.5369;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,0:4:2.96:19,3,0	./.	0/0:43,1:24:25.68:0,26,569	0/0:61,0:24:35.37:0,35,393	0/1:2,0:2:0:0,0,0	1/1:5,0:5:0.94:4,1,0	1/1:9,0:9:8.49:51,8,0	1/1:10,0:10:15.20:88,15,0	0/1:25,0:23:17.54:101,0,18	1/1:5,0:4:9.75:59,10,0	0/0:3,0:3:0:0,0,0	1/1:5,1:6:2.74:12,3,0	1/1:20,1:15:11.93:160,12,0	1/1:22,0:22:19.75:152,20,0	./.	1/1:1,1:2:2.94:18,3,0	1/1:3,0:3:0.94:1,1,0	1/1:3,1:4:8.95:74,9,0	1/1:18,0:16:14.42:276,14,0	1/1:16,0:15:1.95:86,2,0	0/1:32,0:32:0.59:42,0,1	./.	0/1:21,0:20:0.45:40,0,0	1/1:9,0:9:5.64:39,6,0	./.	1/1:4,0:4:7.27:88,7,0	1/1:7,0:7:10.67:61,11,0	1/1:2,0:2:5.96:53,6,0
chr10	15781067	.	GA	G	443.94	PASS	AB=0.801;AC=16;AF=0.320;AN=50;BaseQRankSum=4.368;DP=365;FS=5.326;HRun=1;HaplotypeScore=131.0102;InbreedingCoeff=0.3704;MQ=66.45;MQ0=10;MQRankSum=-4.612;QD=7.40;ReadPosRankSum=-0.963;VQSLOD=0.4431;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:6,0:5:1.50:14,0,1	0/1:1,0:1:0:0,0,0	0/0:52,0:30:76.93:0,77,923	0/0:70,0:31:43.25:0,43,573	./.	0/1:5,2:7:6.59:7,0,29	0/1:3,6:9:2.23:75,0,2	0/1:3,5:8:5.10:104,0,5	0/0:29,0:27:36.99:0,37,371	1/1:0,4:4:11.25:110,11,0	0/0:2,1:3:0:0,0,0	1/1:4,1:5:3.14:35,3,0	0/0:21,0:15:28.20:0,28,240	0/0:22,0:22:23.82:0,24,223	./.	0/1:3,0:3:9.17:13,0,9	0/0:3,1:4:0.89:0,1,2	0/1:3,2:5:0.31:59,0,0	0/0:19,0:17:44.82:0,45,416	0/0:15,0:14:18.02:0,18,187	0/0:35,0:35:18.49:0,18,209	1/1:2,1:3:5.92:38,6,0	0/0:17,0:17:14.23:0,14,198	0/0:11,0:11:7.57:0,8,68	./.	0/0:5,0:5:0.50:0,1,18	0/1:4,3:7:6.85:67,0,7	1/1:0,2:2:6.01:66,6,0
chr10	15781084	.	AGAGG	A	7584.70	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=1.774;DP=475;FS=17.965;HRun=0;HaplotypeScore=163.7035;InbreedingCoeff=0.9221;MQ=68.21;MQ0=5;MQRankSum=-10.948;QD=40.56;ReadPosRankSum=-0.794;VQSLOD=3.6752;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,10:13:24.13:407,24,0	1/1:1,1:2:3.01:57,3,0	0/0:51,0:44:99:0,110,2428	0/0:59,0:36:49.91:0,50,1187	1/1:1,9:10:14.92:134,15,0	1/1:2,13:15:39.93:649,40,0	1/1:4,20:23:62.65:1091,63,0	1/1:3,12:15:39.13:691,39,0	0/0:27,0:27:66.13:0,66,1630	1/1:2,10:12:36.12:648,36,0	1/1:2,5:7:2.90:38,3,0	1/1:3,12:15:38.74:626,39,0	0/0:14,0:14:36.12:0,36,968	0/0:28,0:28:71.99:0,72,1752	1/1:0,2:2:6.02:114,6,0	1/1:0,9:9:27.09:488,27,0	1/1:2,9:11:24.08:447,24,0	1/1:4,6:10:20.71:334,21,0	0/0:20,0:20:60.14:0,60,1481	0/0:14,0:14:39.05:0,39,921	0/0:46,0:46:54.19:0,54,1422	1/1:3,7:10:24.08:358,24,0	0/0:17,0:17:23.57:0,24,646	0/0:10,0:10:18.49:0,18,424	1/1:0,5:5:14.96:173,15,0	1/1:1,5:6:18.03:287,18,0	1/1:0,16:16:44.82:813,45,0	1/1:3,2:5:15:230,15,0
chr10	15781143	.	A	AG	13888.44	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-2.166;DP=653;FS=10.805;HRun=0;HaplotypeScore=133.5874;InbreedingCoeff=0.9904;MQ=79.59;MQ0=0;MQRankSum=-2.995;QD=38.05;ReadPosRankSum=4.474;VQSLOD=3.1549;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,39:40:99:1451,102,0	1/1:0,7:7:21.07:302,21,0	0/0:33,0:33:93.70:0,94,1254	0/0:28,0:28:68.39:0,68,938	1/1:2,12:14:28.09:417,28,0	1/1:1,22:23:61.44:888,61,0	1/1:2,32:33:88.43:1214,88,0	1/1:2,40:42:99:1591,117,0	0/0:35,0:35:97.48:0,97,656	1/1:0,17:17:51.17:731,51,0	1/1:0,10:10:27.09:375,27,0	1/1:1,22:23:63.21:891,63,0	0/0:22,0:22:59.97:0,60,394	0/0:29,0:29:73.55:0,74,473	1/1:1,17:18:48.16:674,48,0	1/1:0,14:14:39.13:543,39,0	1/1:2,24:26:75.24:1037,75,0	1/1:0,13:13:39.13:549,39,0	0/0:31,0:31:54.49:0,54,492	0/0:17,0:17:43.84:0,44,261	0/0:63,0:63:99:0,162,1037	1/1:0,16:16:36.12:501,36,0	0/0:13,0:13:38.23:0,38,234	0/0:17,0:17:47.04:0,47,295	1/1:1,13:14:37.36:533,37,0	1/1:0,22:22:66.22:931,66,0	1/1:0,28:28:81.27:1130,81,0	1/1:0,4:4:9.03:129,9,0
chr10	15781753	.	A	AAACAACAACAACAAC	14723.31	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=2.699;DP=653;FS=14.076;HRun=0;HaplotypeScore=223.0274;InbreedingCoeff=0.6480;MQ=50.76;MQ0=2;MQRankSum=-2.677;QD=25.13;ReadPosRankSum=2.083;VQSLOD=2.1637;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:33:17.77:942,18,0	1/1:4,0:9:6.02:122,6,0	0/0:31,0:22:12.04:0,12,220	0/0:36,0:26:21.02:0,21,307	1/1:4,0:17:26.97:440,27,0	1/1:10,0:23:18.06:448,18,0	1/1:15,0:28:9.03:244,9,0	1/1:18,0:29:51.16:1159,51,0	1/1:14,0:28:21.54:884,22,0	1/1:8,0:20:27.06:493,27,0	1/1:5,0:11:16.82:227,17,0	1/1:16,1:28:6.02:391,6,0	1/1:9,0:25:12.51:542,13,0	1/1:10,0:18:12.04:543,12,0	1/1:19,0:25:24.06:876,24,0	1/1:13,0:28:9.03:572,9,0	1/1:13,0:29:24.08:547,24,0	1/1:12,0:20:6.02:392,6,0	1/1:18,0:21:0.51:452,1,0	1/1:9,0:17:13.22:258,13,0	1/1:13,0:23:21.32:465,21,0	1/1:8,0:13:21.06:939,21,0	1/1:8,0:13:7.53:160,8,0	1/1:20,0:40:21.07:801,21,0	1/1:8,0:22:42.14:1395,42,0	1/1:11,0:21:30.07:579,30,0	1/1:10,0:26:15.52:379,16,0	1/1:8,0:15:30.05:472,30,0
chr10	15782654	.	CGGGGTGGGG	C	24826.13	PASS	AB=0.965;AC=45;AF=0.804;AN=56;BaseQRankSum=-0.955;DP=575;FS=1.422;HRun=0;HaplotypeScore=185.8849;InbreedingCoeff=0.5147;MQ=61.63;MQ0=0;MQRankSum=-5.205;QD=49.06;ReadPosRankSum=7.680;VQSLOD=4.3135;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,29:32:57.19:1647,57,0	1/1:0,7:7:18.06:543,18,0	0/0:23,0:18:47.64:0,48,1152	0/0:13,0:9:17.93:0,18,516	1/1:0,15:15:30.99:841,31,0	1/1:3,21:24:51.18:1539,51,0	1/1:1,22:23:42.13:1254,42,0	1/1:5,19:24:48.77:1168,49,0	0/0:13,0:14:8.11:0,8,112	1/1:4,30:34:69.19:1941,69,0	1/1:2,13:15:18.06:541,18,0	1/1:0,33:33:75.26:2260,75,0	1/1:10,0:10:3:25,3,0	1/1:15,0:15:5.99:50,6,0	1/1:0,26:26:72.25:2136,72,0	1/1:2,28:30:69:2082,69,0	1/1:4,19:23:33.11:997,33,0	1/1:2,20:22:39.13:1178,39,0	0/1:13,0:13:13.92:14,0,195	1/1:18,0:18:3.15:24,3,0	0/1:32,0:33:88.55:93,0,89	1/1:0,22:22:54.18:1550,54,0	0/1:11,0:12:19.82:20,0,20	0/0:19,0:19:2.06:0,2,98	1/1:0,27:27:63.21:1841,63,0	1/1:1,19:21:54.14:1544,54,0	1/1:3,17:20:39.13:1175,39,0	1/1:0,7:7:12.04:363,12,0
chr10	15782655	.	GGGGT	G	11119.70	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=2.334;DP=517;FS=4.541;HRun=0;HaplotypeScore=179.4865;InbreedingCoeff=0.7571;MQ=61.89;MQ0=0;MQRankSum=-6.327;QD=23.12;ReadPosRankSum=5.629;VQSLOD=4.0920;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:32,0:32:54.27:649,54,0	1/1:7,0:7:18.06:226,18,0	0/0:23,0:18:41.56:0,42,576	0/0:13,0:9:17.58:0,18,218	1/1:15,0:15:30.92:360,31,0	1/1:24,0:24:51.16:641,51,0	1/1:22,0:22:42.13:517,42,0	1/1:23,0:23:51.01:550,51,0	1/1:9,0:9:11.99:113,12,0	1/1:33,0:33:69.19:832,69,0	1/1:13,0:13:18.06:227,18,0	1/1:33,0:33:75.24:951,75,0	1/1:5,0:5:3:25,3,0	1/1:10,0:10:5.99:51,6,0	1/1:26,0:26:70.78:871,71,0	1/1:29,0:29:68.81:867,69,0	1/1:23,0:23:33.11:416,33,0	1/1:22,0:22:39.12:492,39,0	1/1:9,0:9:14.93:120,15,0	1/1:11,0:11:11.99:100,12,0	1/1:22,2:24:34.48:260,34,0	1/1:22,0:22:51.64:655,52,0	1/1:4,0:4:6:53,6,0	1/1:11,2:13:8.23:85,8,0	1/1:27,0:27:60.19:769,60,0	1/1:20,0:20:54.12:648,54,0	1/1:18,0:18:39.12:489,39,0	1/1:7,0:7:12.04:151,12,0
chr10	15782656	.	GGGT	G	9771.34	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=2.591;DP=508;FS=3.196;HRun=0;HaplotypeScore=176.0002;InbreedingCoeff=0.8287;MQ=61.97;MQ0=0;MQRankSum=-6.259;QD=20.70;ReadPosRankSum=5.280;VQSLOD=4.8547;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:30:52.48:544,52,0	1/1:7,0:7:18.05:192,18,0	0/0:23,0:18:41.14:0,41,454	0/0:13,0:9:17.56:0,18,179	1/1:15,0:15:30.48:297,30,0	1/1:24,0:24:51.13:541,51,0	1/1:22,0:22:42.09:437,42,0	1/1:23,0:23:51.46:487,51,0	1/1:8,1:9:18.02:190,18,0	1/1:31,0:31:69.13:710,69,0	1/1:13,0:13:18.04:190,18,0	1/1:33,0:33:75.19:796,75,0	1/1:5,1:6:6:51,6,0	1/1:8,2:10:11.52:101,12,0	1/1:26,0:26:69.64:733,70,0	1/1:28,0:28:68.87:732,69,0	1/1:20,0:20:33.08:351,33,0	1/1:22,0:22:39.10:415,39,0	1/1:6,2:8:14.98:149,15,0	1/1:7,3:10:11.99:100,12,0	1/1:23,2:25:41.07:334,41,0	1/1:22,0:22:51.12:530,51,0	1/1:4,0:4:6:53,6,0	1/1:9,3:12:12.29:110,12,0	1/1:27,0:27:60.15:640,60,0	1/1:20,0:20:54.04:549,54,0	1/1:18,0:18:39.10:413,39,0	1/1:7,0:7:12.03:128,12,0
chr10	15782657	.	GGT	G	8587.30	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=2.452;DP=520;FS=3.285;HRun=0;HaplotypeScore=175.8650;InbreedingCoeff=0.8989;MQ=60.01;MQ0=0;MQRankSum=-6.110;QD=17.67;ReadPosRankSum=4.515;VQSLOD=4.5516;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:30:51.93:441,52,0	1/1:7,0:7:18:156,18,0	0/0:22,0:17:38.53:0,39,344	0/0:12,0:8:17.10:0,17,122	1/1:15,0:15:29.66:241,30,0	1/1:23,0:23:50.99:440,51,0	1/1:22,0:22:41.97:357,42,0	1/1:22,0:22:51.37:422,51,0	1/1:15,0:15:35.99:310,36,0	1/1:31,0:31:68.93:585,69,0	1/1:13,0:13:17.99:154,18,0	1/1:33,0:33:74.98:646,75,0	1/1:6,0:6:8.99:75,9,0	1/1:12,1:13:20.97:173,21,0	1/1:26,0:26:69.45:595,69,0	1/1:28,0:28:68.66:595,69,0	1/1:20,0:20:32.99:285,33,0	1/1:21,0:21:38.99:338,39,0	1/1:7,1:8:14.98:140,15,0	1/1:10,0:10:14.99:125,15,0	1/1:26,1:27:46.82:367,47,0	1/1:22,0:22:50.95:430,51,0	1/1:5,0:5:9:78,9,0	1/1:16,1:17:26.98:228,27,0	1/1:27,0:27:59.99:519,60,0	1/1:20,0:20:53.76:447,54,0	1/1:18,0:18:38.99:335,39,0	1/1:7,0:7:12:104,12,0
chr10	15784253	.	GGAGA	G	4208.84	PASS	AB=1.000;AC=16;AF=0.286;AN=56;BaseQRankSum=2.114;DP=604;FS=19.426;HRun=0;HaplotypeScore=106.2750;InbreedingCoeff=0.7856;MQ=44.30;MQ0=36;MQRankSum=0.403;QD=24.19;ReadPosRankSum=-0.247;VQSLOD=2.0686;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:27,1:25:6.58:401,7,0	0/0:10,0:10:27.07:0,27,547	0/0:54,0:9:24.07:0,24,482	0/0:78,0:16:37.16:0,37,612	0/0:21,0:19:34.50:0,34,779	0/0:23,0:22:50.30:0,50,1173	0/0:17,0:17:27.97:0,28,648	0/0:36,0:33:90.23:0,90,1704	0/1:13,0:12:11.35:11,0,578	0/0:16,0:16:48.16:0,48,1023	0/0:11,0:10:27.06:0,27,573	1/1:15,7:21:48.33:809,48,0	0/1:17,0:17:7.92:8,0,890	0/0:14,0:14:19.86:0,20,532	1/1:16,6:21:7.88:581,8,0	1/1:15,2:14:41.93:594,42,0	0/0:21,0:20:45.13:0,45,888	1/1:14,0:13:33.04:580,33,0	0/0:17,0:17:4.39:0,4,928	0/0:14,0:14:33.11:0,33,812	0/0:21,0:20:33.09:0,33,693	1/1:23,2:23:44.46:871,44,0	0/0:12,0:12:28.65:0,29,687	0/0:20,0:18:29.97:0,30,684	1/1:11,4:15:20.20:354,20,0	0/0:16,0:16:45.09:0,45,845	0/0:18,0:18:48.14:0,48,1066	0/0:7,0:6:18:0,18,304
chr10	15784254	.	GA	G	1690.83	PASS	AB=0.978;AC=12;AF=0.214;AN=56;BaseQRankSum=7.906;DP=595;FS=33.603;HRun=1;HaplotypeScore=96.1877;InbreedingCoeff=0.7641;MQ=43.70;MQ0=36;MQRankSum=0.661;QD=11.91;ReadPosRankSum=1.081;VQSLOD=0.4641;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:24,2:23:11.02:203,11,0	0/0:9,0:9:27.04:0,27,397	0/0:51,1:8:24.08:0,24,357	0/0:74,1:14:22.76:0,23,458	0/0:21,0:19:35.79:0,36,551	0/0:23,0:22:51.23:0,51,774	0/0:16,0:16:34.65:0,35,470	0/0:36,0:33:93.23:0,93,1389	0/0:13,0:12:31.44:0,31,439	0/0:17,0:17:48.16:0,48,759	0/0:10,0:9:27.08:0,27,398	0/1:21,1:21:18.46:329,0,18	0/0:17,0:16:32.45:0,32,600	0/0:14,0:14:22.25:0,22,357	1/1:18,3:20:19.27:263,19,0	1/1:18,0:15:10.10:287,10,0	0/0:22,0:20:45.14:0,45,688	0/1:15,0:14:31:202,0,31	0/0:17,0:17:49.68:0,50,706	0/0:14,0:14:33.58:0,34,528	0/0:19,0:17:33.10:0,33,518	1/1:22,3:23:38.25:391,38,0	0/0:12,0:12:29.46:0,29,439	0/0:22,0:18:30.10:0,30,478	1/1:14,1:15:21.08:192,21,0	0/0:17,0:17:45.10:0,45,658	0/0:19,0:19:51.12:0,51,783	0/0:8,0:6:18.06:0,18,274
chr10	15784257	.	AG	A	1722.35	PASS	AB=0.930;AC=20;AF=0.357;AN=56;BaseQRankSum=8.160;DP=589;FS=4.118;HRun=2;HaplotypeScore=96.3611;InbreedingCoeff=0.5311;MQ=42.13;MQ0=38;MQRankSum=3.617;QD=7.00;ReadPosRankSum=0.925;VQSLOD=0.9858;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:25,2:24:3.71:165,4,0	0/0:9,0:9:22.13:0,22,253	0/0:47,0:8:20.09:0,20,235	0/0:71,0:12:27.33:0,27,324	0/0:21,0:18:26.77:0,27,360	0/0:23,0:21:51.22:0,51,639	0/1:15,2:17:38.48:38,0,306	0/0:37,0:34:83.53:0,84,720	0/1:12,2:13:20.09:20,0,275	0/0:18,0:18:49.19:0,49,494	0/0:8,1:8:21.54:0,22,280	1/1:21,1:21:44.68:389,45,0	0/1:17,1:17:12.98:13,0,430	0/1:12,0:12:16.55:17,0,221	1/1:18,3:21:20.27:253,20,0	1/1:16,0:13:28.56:236,29,0	0/0:20,0:18:39.88:0,40,439	1/1:16,0:15:32.74:244,33,0	0/1:15,1:16:55.33:55,0,403	0/0:12,0:12:30.57:0,31,405	0/0:18,0:16:29.92:0,30,325	1/1:22,1:24:32:330,32,0	0/0:12,1:13:29.46:0,29,368	0/1:21,2:19:2.08:2,0,287	1/1:15,1:17:15.41:156,15,0	0/0:16,0:16:44.67:0,45,433	0/0:18,0:18:50.73:0,51,620	0/0:9,0:6:17.62:0,18,174
chr10	15784258	.	G	GA	1694.70	PASS	AB=0.939;AC=19;AF=0.339;AN=56;BaseQRankSum=7.661;DP=604;FS=4.996;HRun=1;HaplotypeScore=111.8312;InbreedingCoeff=0.3567;MQ=41.70;MQ0=36;MQRankSum=1.918;QD=6.03;ReadPosRankSum=0.521;VQSLOD=0.5698;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:28,1:27:12.37:147,0,12	0/0:8,0:8:22.13:0,22,253	0/0:46,0:8:20.09:0,20,235	0/0:70,0:12:27.33:0,27,324	0/0:21,0:18:27.56:0,28,362	0/0:22,1:21:51.22:0,51,639	0/1:18,0:18:39.41:39,0,305	0/0:36,0:33:83.53:0,84,720	0/1:14,0:14:39.61:40,0,270	0/0:18,0:18:49.30:0,49,519	0/0:9,0:8:23.94:0,24,294	1/1:25,0:24:42.06:354,42,0	0/1:17,2:18:49.24:49,0,408	0/1:9,2:12:5.33:5,0,175	0/1:23,0:22:0.84:227,0,1	1/1:16,0:13:25.39:198,25,0	0/0:19,1:19:40.83:0,41,494	1/1:17,0:16:36.64:273,37,0	0/1:18,1:19:49.60:50,0,401	0/0:12,0:12:29.99:0,30,400	0/1:16,3:17:8.39:8,0,285	1/1:26,1:25:32:330,32,0	0/0:16,0:16:29.11:0,29,365	0/1:26,1:22:7.97:8,0,268	1/1:16,0:16:14.68:155,15,0	0/0:15,0:16:45.11:0,45,461	0/0:17,0:18:51.15:0,51,665	0/0:9,0:6:18.03:0,18,207
chr10	15784306	.	AAAGAATG	A	6541.78	PASS	AB=0.963;AC=41;AF=0.732;AN=56;BaseQRankSum=1.667;DP=622;FS=41.339;HRun=0;HaplotypeScore=145.5615;InbreedingCoeff=0.0596;MQ=55.63;MQ0=35;MQRankSum=-1.846;QD=11.81;ReadPosRankSum=1.921;VQSLOD=2.5654;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:22,11:24:2.25:184,0,2	1/1:11,0:10:11.19:89,11,0	0/0:20,0:13:38.80:0,39,1068	0/0:29,0:21:60.55:0,61,1432	1/1:22,0:20:30.71:215,31,0	1/1:19,0:19:7.47:123,7,0	1/1:18,0:18:21.04:214,21,0	0/1:46,0:45:27.68:791,0,28	1/1:21,0:21:3.65:178,4,0	0/1:24,0:22:4.56:379,0,5	1/1:18,0:18:32.66:255,33,0	1/1:21,0:14:14.47:206,14,0	0/1:17,0:17:31.96:97,0,32	0/1:23,0:21:73.46:105,0,73	0/1:19,2:17:17.31:192,0,17	1/1:19,0:13:4.22:330,4,0	1/1:19,0:18:0.99:199,1,0	1/1:24,0:20:3.81:456,4,0	0/1:20,0:20:63.58:294,0,64	1/1:32,0:32:33.14:423,33,0	0/1:23,0:23:44.64:116,0,45	0/0:5,14:16:0:0,0,0	1/1:21,0:21:25.45:244,25,0	0/1:26,0:24:43.95:54,0,44	1/1:17,0:14:14.69:191,15,0	1/1:25,0:24:63.82:669,64,0	1/1:18,0:18:29.88:338,30,0	1/1:16,0:16:15.02:199,15,0
chr10	15784310	.	AATG	A	11389.27	PASS	AC=50;AF=0.926;AN=54;BaseQRankSum=1.533;DP=593;FS=9.673;HRun=0;HaplotypeScore=98.3390;InbreedingCoeff=0.8665;MQ=61.07;MQ0=29;MQRankSum=-5.430;QD=21.78;ReadPosRankSum=1.849;VQSLOD=4.2960;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:13,4:19:10.59:175,11,0	1/1:1,10:10:15.02:195,15,0	0/0:23,0:16:45.15:0,45,947	0/0:30,0:22:60.65:0,61,1112	1/1:0,20:20:31.29:374,31,0	1/1:5,14:19:14.98:221,15,0	1/1:2,15:17:21.07:348,21,0	1/1:7,39:45:99:1766,108,0	1/1:0,20:20:30.10:470,30,0	1/1:4,18:21:54.15:825,54,0	1/1:0,17:17:33.11:490,33,0	1/1:2,12:14:14.96:187,15,0	1/1:2,15:17:26.93:399,27,0	1/1:4,15:18:11.69:309,12,0	1/1:4,14:18:11.94:144,12,0	1/1:2,11:12:18.06:295,18,0	1/1:2,15:16:14.98:248,15,0	1/1:3,17:19:21.07:331,21,0	1/1:4,15:19:48.16:793,48,0	1/1:2,27:29:62.90:877,63,0	1/1:4,14:18:17.94:286,18,0	./.	1/1:2,18:20:33:487,33,0	1/1:6,17:23:8.89:133,9,0	1/1:0,15:15:14.68:157,15,0	1/1:3,24:26:72.23:1144,72,0	1/1:0,18:18:30.10:485,30,0	1/1:0,16:16:15.05:249,15,0
chr10	15784614	.	A	AC	17983.59	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-15.337;DP=737;FS=3.785;HRun=2;HaplotypeScore=68.9717;InbreedingCoeff=0.9974;MQ=93.05;MQ0=0;MQRankSum=-4.819;QD=37.62;ReadPosRankSum=1.589;VQSLOD=5.6137;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,126,1519	1/1:1,10:11:30.10:432,30,0	0/0:27,0:27:66.19:0,66,831	0/0:36,0:36:87.22:0,87,1044	1/1:0,19:19:57.19:812,57,0	1/1:0,21:21:57.19:821,57,0	1/1:2,30:32:78.26:1123,78,0	1/1:2,34:36:99:1414,102,0	1/1:0,21:21:60.20:862,60,0	1/1:1,36:37:99:1514,108,0	1/1:1,16:17:33:448,33,0	0/0:24,0:24:72.22:0,72,877	1/1:0,21:21:54.18:777,54,0	1/1:2,21:23:57.19:821,57,0	0/0:37,0:37:99:0,108,1326	0/0:19,0:19:54.16:0,54,657	1/1:3,47:50:99:1986,138,0	0/0:21,0:21:60.14:0,60,712	1/1:1,19:21:60.12:795,60,0	1/1:0,17:17:48.15:686,48,0	1/1:0,41:41:99:1425,99,0	0/0:32,0:32:90.27:0,90,1101	1/1:1,16:17:42.14:603,42,0	1/1:3,35:37:96.16:1382,96,0	0/0:18,0:18:54.17:0,54,669	1/1:1,31:32:93.24:1263,93,0	1/1:0,18:17:42.13:604,42,0	1/1:0,6:6:15.05:216,15,0
chr10	15785043	.	A	AGAAGG	15084.18	PASS	AB=0.604;AC=37;AF=0.661;AN=56;BaseQRankSum=-10.381;DP=736;FS=13.267;HRun=0;HaplotypeScore=136.2366;InbreedingCoeff=0.9235;MQ=70.50;MQ0=12;MQRankSum=-5.052;QD=36.70;ReadPosRankSum=2.801;VQSLOD=4.4169;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:39.48:0,39,709	1/1:2,6:7:8.96:192,9,0	0/0:73,0:45:30.45:0,30,494	0/0:105,0:52:18.43:0,18,477	1/1:5,10:17:27.01:567,27,0	1/1:6,15:21:33.11:957,33,0	0/1:10,18:29:1.80:790,0,2	1/1:18,10:30:36.94:563,37,0	1/1:8,21:32:30.10:871,30,0	1/1:11,16:28:48.09:1086,48,0	1/1:2,4:7:9.03:246,9,0	0/0:24,0:24:45.14:0,45,809	1/1:3,14:16:27.09:783,27,0	1/1:7,25:35:44.88:1245,45,0	0/0:21,0:21:42.12:0,42,729	0/0:28,0:27:57.17:0,57,1000	1/1:6,10:16:18.06:523,18,0	0/0:17,0:17:33.02:0,33,540	1/1:8,8:16:24.06:493,24,0	1/1:5,12:18:36.08:977,36,0	1/1:13,20:34:36.12:967,36,0	0/0:12,0:12:18:0,18,265	1/1:5,5:10:12.04:304,12,0	1/1:8,22:30:52.42:1475,52,0	0/0:18,0:18:45.14:0,45,814	1/1:4,21:27:66.13:1482,66,0	1/1:6,16:21:36.12:1040,36,0	1/1:2,9:12:18.06:523,18,0
chr10	15785095	.	T	TG	4828.30	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-8.412;DP=655;FS=2.625;HRun=7;HaplotypeScore=111.6934;InbreedingCoeff=0.9888;MQ=70.58;MQ0=0;MQRankSum=-2.796;QD=28.07;ReadPosRankSum=1.858;VQSLOD=4.4511;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,25:31:72.18:853,72,0	0/0:4,0:4:9.01:0,9,87	0/0:27,0:27:37.28:0,37,427	0/0:26,0:26:59.45:0,59,503	0/0:19,0:19:39:0,39,365	0/0:18,0:18:48.07:0,48,462	0/0:29,0:29:57.03:0,57,531	0/0:26,0:26:54.07:0,54,521	0/0:24,0:24:33.03:0,33,313	0/0:28,0:28:72.10:0,72,691	0/0:11,0:11:26.72:0,27,244	1/1:3,19:22:51.12:598,51,0	0/0:33,0:33:81.11:0,81,775	0/0:37,0:37:62.62:0,63,606	1/1:3,22:25:63.19:761,63,0	1/1:1,30:31:90.73:1075,91,0	0/0:25,0:25:66.11:0,66,637	1/1:3,12:15:36.11:435,36,0	0/0:16,0:15:38.09:0,38,348	0/0:12,0:12:33.05:0,33,317	0/0:37,0:37:96.14:0,96,921	1/1:2,22:24:42.13:507,42,0	0/0:12,0:12:26.92:0,27,239	0/0:26,0:26:60.10:0,60,579	1/1:4,20:24:51.11:600,51,0	0/0:24,0:24:51.03:0,51,482	0/0:33,0:33:78.12:0,78,752	0/0:16,0:16:35.26:0,35,326
chr10	15785456	.	AACACACACACACACACACACACACACACACAC	A	11162.34	PASS	AB=0.738;AC=14;AF=0.250;AN=56;BaseQRankSum=8.070;DP=596;FS=5.906;HRun=0;HaplotypeScore=460.1575;InbreedingCoeff=0.7215;MQ=59.08;MQ0=8;MQRankSum=-9.112;QD=49.17;ReadPosRankSum=5.647;VQSLOD=1.3984;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:27,14:40:99:1401,0,195	0/0:3,0:4:9.03:0,9,481	0/0:21,0:14:18.06:0,18,706	0/0:22,0:18:27.09:0,27,1171	0/0:6,0:13:12.04:0,12,731	0/0:10,0:18:24.55:0,25,1015	0/0:26,0:35:51.17:0,51,2476	0/0:19,0:18:27.08:0,27,1211	0/0:22,0:22:48.16:0,48,5572	0/0:17,0:23:46.91:0,47,2026	0/0:9,0:13:17.98:0,18,737	1/1:22,13:34:24.08:1967,24,0	0/0:21,0:21:54.19:0,54,6696	0/0:10,0:10:20.61:0,21,1726	1/1:17,20:37:30.10:2459,30,0	1/1:20,9:29:20.80:1721,21,0	0/0:15,0:18:12.04:0,12,665	1/1:11,3:13:6.02:492,6,0	0/0:9,0:9:9.03:0,9,790	0/0:13,0:14:24.07:0,24,2772	0/0:40,0:40:81.28:0,81,8742	1/1:8,10:18:5.08:1614,5,0	0/0:11,0:12:21.07:0,21,2115	0/0:24,0:25:51.18:0,51,5817	1/1:17,9:26:18.06:1304,18,0	0/1:17,1:26:99:204,0,1722	0/0:8,0:19:36.12:0,36,1564	0/0:10,0:10:12.04:0,12,620
chr10	15787890	.	GTGCTCCTTCCCGCTGCA	G	15025.17	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=15.340;DP=612;FS=0.402;HRun=0;HaplotypeScore=280.9610;InbreedingCoeff=0.9886;MQ=88.41;MQ0=0;MQRankSum=-15.577;QD=102.91;ReadPosRankSum=6.095;VQSLOD=3.8344;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,23:25:54.19:2712,54,0	0/0:12,0:12:36.12:0,36,2722	0/0:25,0:25:75.24:0,75,4392	0/0:26,0:26:72.25:0,72,3807	0/0:18,0:18:51.18:0,51,3655	0/0:15,0:15:45.15:0,45,3637	0/0:29,0:29:84.29:0,84,6536	0/0:24,0:24:66.23:0,66,4269	0/0:22,0:22:63.22:0,63,4856	0/0:21,0:21:63.22:0,63,4873	0/0:22,0:22:63.22:0,63,5083	1/1:1,23:24:57.20:2863,57,0	0/0:24,0:24:72.25:0,72,5459	0/0:20,0:20:60.16:0,60,4233	1/1:4,20:24:51.18:2562,51,0	1/1:5,17:22:45.15:2261,45,0	0/0:36,0:36:99:0,108,8532	1/1:4,11:15:21.07:942,21,0	0/0:24,0:24:69.24:0,69,4828	0/0:14,0:14:39.13:0,39,2694	0/0:29,0:29:87.30:0,87,6635	1/1:4,18:21:45.15:2158,45,0	0/0:24,0:24:72.25:0,72,5881	0/0:31,0:31:93.32:0,93,7266	1/1:2,11:14:33.07:1527,33,0	0/0:16,0:16:48.16:0,48,3489	0/0:31,0:31:90.31:0,90,6850	0/0:3,0:3:9.03:0,9,672
chr10	15788775	.	C	CG	7712.29	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-5.702;DP=623;FS=10.174;HRun=2;HaplotypeScore=103.9912;InbreedingCoeff=0.9994;MQ=81.24;MQ0=0;MQRankSum=-4.681;QD=44.58;ReadPosRankSum=3.309;VQSLOD=2.7742;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,38:39:99:1677,105,0	0/0:16,0:16:48.16:0,48,671	0/0:14,0:14:35.98:0,36,427	0/0:22,0:22:56.18:0,56,712	0/0:12,0:12:33.09:0,33,443	0/0:18,0:18:54.15:0,54,734	0/0:23,0:23:60.20:0,60,839	0/0:30,0:30:84.26:0,84,1144	0/0:22,0:22:66.22:0,66,922	0/0:21,0:21:63.19:0,63,850	0/0:10,0:10:30.08:0,30,386	1/1:0,23:23:63.21:1005,63,0	0/0:15,0:15:45.15:0,45,629	0/0:22,0:22:66.22:0,66,922	1/1:0,28:28:84.29:1341,84,0	1/1:0,19:19:54.18:862,54,0	0/0:52,0:52:99:0,157,2181	1/1:1,32:33:93.32:1486,93,0	0/0:23,0:23:69.21:0,69,946	0/0:25,0:25:69.22:0,69,948	0/0:29,0:29:87.29:0,87,1216	1/1:1,10:11:27.09:431,27,0	0/0:13,0:13:39.13:0,39,540	0/0:28,0:28:81.26:0,81,1117	1/1:0,20:20:57.19:911,57,0	0/0:15,0:15:45.15:0,45,629	0/0:31,0:31:90.30:0,90,1239	0/0:9,0:9:27.09:0,27,378
chr10	15790944	.	CGGCT	C	6025.94	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-0.245;DP=558;FS=29.876;HRun=0;HaplotypeScore=168.7715;InbreedingCoeff=0.9848;MQ=88.32;MQ0=1;MQRankSum=-12.203;QD=59.08;ReadPosRankSum=2.954;VQSLOD=4.0615;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,22:22:63.17:1240,63,0	0/0:8,0:8:24.08:0,24,692	0/0:27,0:28:83.87:0,84,2196	0/0:25,0:24:60.06:0,60,1464	0/0:22,0:22:63.22:0,63,1791	0/0:16,0:16:48.16:0,48,1387	0/0:23,0:22:48.16:0,48,1352	0/0:29,0:29:87.30:0,87,2398	0/0:17,0:17:41.83:0,42,1213	0/0:19,0:18:54.18:0,54,1482	0/0:25,0:25:75.26:0,75,2169	1/1:3,19:22:66.23:1375,66,0	0/0:28,0:28:72.23:0,72,1992	0/0:11,0:11:27.05:0,27,715	1/1:1,24:25:69.24:1445,69,0	1/1:0,8:8:24.08:503,24,0	0/0:34,0:35:87.03:0,87,2486	1/1:0,14:14:42.14:877,42,0	0/0:23,0:23:69.22:0,69,1876	0/0:19,0:19:57.20:0,57,1634	0/0:29,0:29:75.24:0,75,2057	1/1:2,5:7:21.04:398,21,0	0/0:16,0:16:45.14:0,45,1238	0/0:37,0:37:96.33:0,96,2736	1/1:0,3:3:9.03:189,9,0	0/0:21,0:21:63.22:0,63,1813	0/0:17,0:17:48.16:0,48,1368	0/0:8,0:8:15.05:0,15,434
chr10	15790965	.	GAACA	G	15894.50	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=3.215;DP=579;FS=8.277;HRun=0;HaplotypeScore=142.4501;InbreedingCoeff=0.8758;MQ=75.11;MQ0=7;MQRankSum=-3.583;QD=30.80;ReadPosRankSum=5.356;VQSLOD=4.4554;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,17:24:42.06:649,42,0	1/1:3,5:8:9.03:137,9,0	0/0:32,0:28:37.61:0,38,660	0/0:31,0:28:35.81:0,36,640	1/1:5,15:20:42.14:668,42,0	1/1:4,11:15:33.11:547,33,0	1/1:4,15:18:27.09:448,27,0	1/1:9,17:26:51.14:775,51,0	1/1:4,13:18:27.09:426,27,0	1/1:5,16:20:51.17:822,51,0	1/1:4,23:27:57.19:914,57,0	1/1:9,15:24:45.15:746,45,0	1/1:8,21:29:48.15:795,48,0	1/1:2,7:9:12.04:199,12,0	1/1:5,26:30:75.24:1202,75,0	1/1:2,10:11:21.07:348,21,0	1/1:5,31:36:69.24:1144,69,0	1/1:7,13:20:40.53:582,41,0	1/1:8,13:21:39.13:614,39,0	1/1:3,17:20:51.17:831,51,0	1/1:5,21:26:51.17:845,51,0	1/1:1,7:8:18.06:284,18,0	1/1:5,11:16:24.08:398,24,0	1/1:9,26:34:63.22:1045,63,0	1/1:2,3:5:9.03:137,9,0	1/1:4,17:20:48.16:793,48,0	1/1:2,13:15:27.09:448,27,0	1/1:3,5:8:6.02:99,6,0
chr10	15791059	.	CA	C	1983.61	PASS	AB=0.609;AC=9;AF=0.161;AN=56;BaseQRankSum=15.828;DP=650;FS=3.392;HRun=3;HaplotypeScore=89.6277;InbreedingCoeff=0.3215;MQ=60.92;MQ0=7;MQRankSum=-3.504;QD=13.68;ReadPosRankSum=2.971;VQSLOD=2.8367;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:9,14:23:34.12:272,0,34	0/0:11,0:11:30.06:0,30,397	0/0:33,0:28:50.84:0,51,951	0/0:21,0:17:33.91:0,34,422	0/0:24,0:24:69.23:0,69,987	0/0:21,0:22:65.95:0,66,904	0/0:19,0:19:57.19:0,57,817	0/0:25,0:25:69.23:0,69,978	0/0:23,0:23:63.21:0,63,902	0/0:31,0:31:90.28:0,90,1253	0/0:21,0:21:51.17:0,51,703	1/1:4,26:29:11.73:593,12,0	0/0:24,0:24:66.22:0,66,947	0/0:21,0:21:59.53:0,60,857	0/1:9,17:26:12.86:350,0,13	1/1:2,10:12:10.78:230,11,0	0/0:40,0:39:99:0,106,1531	0/1:6,17:23:22.08:336,0,22	0/0:28,0:26:78.23:0,78,1073	0/0:20,0:20:57.19:0,57,813	0/0:29,0:29:84.25:0,84,1158	0/1:5,7:12:31.21:139,0,31	0/0:16,0:16:42.14:0,42,602	0/0:21,0:20:54.18:0,54,770	0/1:7,12:19:49.63:212,0,50	0/0:28,0:28:78.26:0,78,1110	0/0:33,2:35:23.39:0,23,1173	0/0:13,0:13:36.12:0,36,512
chr10	15791063	.	CAAA	C	2969.09	PASS	AB=0.611;AC=11;AF=0.196;AN=56;BaseQRankSum=15.609;DP=640;FS=2.734;HRun=5;HaplotypeScore=109.3865;InbreedingCoeff=0.7137;MQ=60.30;MQ0=4;MQRankSum=-5.150;QD=20.62;ReadPosRankSum=2.136;VQSLOD=0.0297;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:9,12:21:3.98:365,0,4	0/0:11,0:11:27.04:0,27,545	0/0:32,0:28:73.34:0,73,1211	0/0:17,0:14:36.99:0,37,545	0/0:24,0:24:72.24:0,72,1501	0/0:24,0:24:72.22:0,72,1403	0/0:20,0:20:60.18:0,60,1211	0/0:28,0:28:84.20:0,84,1498	0/0:23,0:23:63.19:0,63,1338	0/0:30,0:30:59.36:0,59,1648	0/0:21,0:21:52.06:0,52,1047	1/1:13,19:31:30.89:765,31,0	0/0:22,0:22:66.23:0,66,1477	0/0:21,0:21:54.74:0,55,1272	1/1:12,15:27:11.28:557,11,0	1/1:5,9:14:25.63:383,26,0	0/0:40,0:40:87.61:0,88,2249	1/1:7,15:22:11:502,11,0	0/0:29,0:27:78.27:0,78,1533	0/0:19,0:19:54.15:0,54,988	0/0:27,0:27:78.25:0,78,1543	0/1:4,7:11:8.35:198,0,8	0/0:16,0:16:42.12:0,42,854	0/0:20,0:20:57.18:0,57,1170	0/1:5,12:17:8.05:367,0,8	0/0:27,0:27:77.62:0,78,1530	0/0:32,0:32:93.17:0,93,1798	0/0:13,0:13:36.12:0,36,776
chr10	15792256	.	T	TCACCCGGAACTTCAGCCCCAGGGGATCCAG	116795.87	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=1.490;DP=574;FS=4.967;HRun=0;HaplotypeScore=422.4122;InbreedingCoeff=0.9247;MQ=73.69;MQ0=0;MQRankSum=-10.204;QD=221.62;ReadPosRankSum=7.106;VQSLOD=3.9963;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:20:48.16:3886,48,0	1/1:3,0:3:9.02:601,9,0	0/0:25,0:25:60.18:0,60,2404	0/0:21,0:22:52.85:0,53,2194	1/1:22,0:22:49.41:4380,49,0	1/1:22,2:25:69.24:6991,69,0	1/1:35,0:35:87.28:6216,87,0	1/1:38,0:37:99:6501,99,0	1/1:20,3:24:60.21:5959,60,0	1/1:24,0:24:72.24:6784,72,0	1/1:26,0:26:72.25:5771,72,0	1/1:10,0:10:21.03:1945,21,0	1/1:24,0:24:60.19:5485,60,0	1/1:13,1:14:42.14:4447,42,0	1/1:9,0:9:24.08:2523,24,0	1/1:11,0:11:29.43:2845,29,0	1/1:21,1:27:63.22:6283,63,0	1/1:12,0:12:33.11:3636,33,0	1/1:16,2:19:51.18:4190,51,0	1/1:22,0:22:54.19:5331,54,0	1/1:27,0:27:57.19:3605,57,0	1/1:8,0:8:24.08:1378,24,0	1/1:23,1:29:62.93:5680,63,0	1/1:10,0:10:9.03:267,9,0	1/1:14,0:14:39.13:3004,39,0	1/1:34,2:37:99:9873,102,0	1/1:27,2:32:89.90:7770,90,0	1/1:4,0:4:12.04:1445,12,0
chr10	15792258	.	A	ACCCGGAACTTCAGCCCCAGGGGATCCAGCG	129528.64	PASS	AB=1.000;AC=51;AF=0.911;AN=56;BaseQRankSum=3.103;DP=648;FS=11.770;HRun=0;HaplotypeScore=497.9808;InbreedingCoeff=0.7417;MQ=69.53;MQ0=0;MQRankSum=-11.079;QD=215.88;ReadPosRankSum=8.387;VQSLOD=4.2611;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:37,1:40:96:8869,96,0	1/1:3,0:3:6.02:558,6,0	0/0:25,0:25:56.36:0,56,2695	0/0:23,0:23:56.03:0,56,2475	1/1:22,0:22:49.20:4170,49,0	1/1:25,0:25:69.24:6648,69,0	1/1:34,0:34:59.25:5703,59,0	1/1:41,0:40:20.37:5932,20,0	1/1:24,0:24:63.21:5720,63,0	1/1:25,0:25:69.64:6331,70,0	1/1:26,0:26:72.25:5485,72,0	1/1:20,0:20:45.10:3697,45,0	1/1:25,0:25:63.69:5690,64,0	1/1:14,0:14:42.14:4219,42,0	1/1:16,2:18:45.15:5121,45,0	1/1:14,1:16:41.46:4019,41,0	1/1:25,0:25:63.22:5982,63,0	1/1:16,2:21:48.16:5245,48,0	1/1:18,0:18:25.17:3731,25,0	1/1:23,0:23:54.19:5041,54,0	1/1:27,0:27:54.12:3221,54,0	1/1:19,1:22:51.18:4677,51,0	1/1:26,0:26:40.95:5374,41,0	0/1:11,0:11:12.97:232,0,13	1/1:19,2:23:63.22:5718,63,0	1/1:36,0:36:99:9404,102,0	1/1:30,0:30:90.16:7375,90,0	1/1:4,0:4:12.04:1368,12,0
chr10	15792747	.	GTTAGTACTT	G	7199.20	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=3.600;DP=419;FS=57.416;HRun=0;HaplotypeScore=165.4438;InbreedingCoeff=0.9826;MQ=76.34;MQ0=0;MQRankSum=-11.661;QD=59.01;ReadPosRankSum=1.294;VQSLOD=2.2778;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:99:0,99,4534	1/1:0,3:3:9.03:284,9,0	0/0:16,0:16:45.15:0,45,1966	0/0:10,0:9:27.09:0,27,978	1/1:2,12:14:21.07:662,21,0	1/1:0,11:11:27.01:702,27,0	1/1:1,15:16:21.07:662,21,0	1/1:3,11:14:33.04:819,33,0	0/0:20,0:20:54.19:0,54,2621	1/1:2,12:14:30.10:947,30,0	1/1:1,13:14:12.04:378,12,0	0/0:13,0:13:39.13:0,39,1936	0/0:17,0:17:48.16:0,48,2231	0/0:17,0:17:51.16:0,51,2354	0/0:16,0:16:45.15:0,45,2073	0/0:17,0:17:51.18:0,51,2493	1/1:0,8:8:18.06:568,18,0	0/0:9,0:9:27.09:0,27,1230	0/0:13,0:13:39.13:0,39,1829	0/0:19,0:19:57.20:0,57,2588	0/0:34,0:34:99:0,99,4670	0/0:18,0:18:54.19:0,54,2591	0/0:9,0:9:27.09:0,27,1340	0/0:21,0:21:63.21:0,63,2851	0/0:15,0:15:45.15:0,45,2133	1/1:1,10:11:27.09:852,27,0	1/1:0,9:9:24.08:757,24,0	1/1:0,8:8:18.06:568,18,0
chr10	15792807	.	CCAG	C	51	PASS	AB=0.879;AC=6;AF=0.111;AN=54;BaseQRankSum=3.737;DP=253;FS=8.630;HRun=0;HaplotypeScore=64.9993;InbreedingCoeff=0.1585;MQ=81.58;MQ0=0;MQRankSum=-3.846;QD=1.16;ReadPosRankSum=-1.865;VQSLOD=-0.1641;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:54.18:0,54,1228	1/1:2,1:3:6.02:86,6,0	0/0:8,0:8:21.07:0,21,497	0/0:13,0:13:36.09:0,36,681	0/0:7,1:8:8.55:0,9,209	0/0:8,0:8:6.05:0,6,319	0/0:10,0:10:9.03:0,9,209	0/0:15,0:15:42.14:0,42,977	0/1:8,1:9:31.76:32,0,355	0/0:13,0:13:27.05:0,27,542	0/0:8,0:8:2.04:0,2,6	0/0:5,0:5:15.05:0,15,349	0/0:12,0:12:32.01:0,32,765	0/1:10,1:11:19.66:20,0,604	0/0:6,0:6:18.05:0,18,374	0/0:7,0:7:21.06:0,21,422	0/0:4,0:4:12.04:0,12,279	0/0:6,0:5:15.05:0,15,349	0/0:13,0:13:39.13:0,39,824	0/1:9,3:12:9.02:9,0,487	0/0:10,0:10:27.07:0,27,547	0/0:10,0:10:27.09:0,27,590	0/0:3,0:3:9.03:0,9,209	0/0:11,1:12:15.05:0,15,327	0/1:8,1:9:22.12:22,0,465	0/0:7,0:7:20.99:0,21,379	0/0:7,0:7:18.06:0,18,418	./.
chr10	15793065	.	CT	C	1825.97	PASS	AC=40;AF=0.870;AN=46;BaseQRankSum=-0.771;DP=119;FS=15.197;HRun=1;HaplotypeScore=26.6328;InbreedingCoeff=0.2960;MQ=91.94;MQ0=0;MQRankSum=-5.124;QD=20.07;ReadPosRankSum=2.444;VQSLOD=2.0831;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,6:6:6.02:84,6,0	1/1:0,2:2:3.01:42,3,0	0/0:10,0:10:3.10:0,3,351	0/0:5,0:4:11.97:0,12,138	./.	./.	0/0:0,6:6:0:0,0,0	1/1:0,7:7:21.07:293,21,0	1/1:0,5:5:8.99:104,9,0	1/1:0,4:4:4.66:119,5,0	./.	1/1:0,4:4:3.01:42,3,0	1/1:0,2:2:2.97:20,3,0	1/1:0,2:2:3.01:42,3,0	1/1:0,4:4:3.01:42,3,0	1/1:0,5:5:15.05:208,15,0	1/1:0,4:4:2.96:20,3,0	1/1:0,6:5:9.03:126,9,0	./.	1/1:0,2:2:3.01:42,3,0	1/1:0,6:6:3.01:42,3,0	1/1:0,4:4:11.95:124,12,0	1/1:0,1:1:3.01:42,3,0	1/1:1,7:8:6.02:84,6,0	1/1:0,5:5:3.01:42,3,0	1/1:0,4:4:12.04:167,12,0	1/1:0,10:10:18.06:250,18,0	./.
chr10	15793420	.	AAGAGAGCGAG	A	16036.83	PASS	AB=0.992;AC=48;AF=0.857;AN=56;BaseQRankSum=-2.624;DP=752;FS=5.481;HRun=0;HaplotypeScore=204.2775;InbreedingCoeff=0.3632;MQ=68.21;MQ0=6;MQRankSum=-0.578;QD=24.90;ReadPosRankSum=6.525;VQSLOD=3.5291;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:9,30:39:24.04:609,24,0	1/1:1,15:16:18.06:549,18,0	0/0:41,0:25:26.56:0,27,501	0/0:63,0:41:26.57:0,27,413	1/1:3,25:28:38.75:640,39,0	1/1:2,20:22:42.06:1103,42,0	1/1:7,23:30:21:532,21,0	1/1:11,28:39:84.07:1205,84,0	0/1:31,0:32:99:263,0,158	1/1:4,24:28:73.39:1666,73,0	1/1:3,10:13:14.92:295,15,0	1/1:4,15:19:33.11:967,33,0	0/1:25,0:25:22.36:98,0,22	1/1:31,0:31:21.54:406,22,0	1/1:9,27:36:39:1021,39,0	1/1:4,27:31:36.12:1047,36,0	1/1:7,20:28:5.16:673,5,0	1/1:3,8:11:6.02:185,6,0	0/1:19,0:19:19.10:510,0,19	1/1:11,0:11:14.91:205,15,0	1/1:32,0:32:3.01:74,3,0	1/1:1,20:21:38.79:784,39,0	1/1:13,0:13:8.70:175,9,0	0/1:47,0:47:1.84:414,0,2	1/1:4,19:23:24.08:710,24,0	1/1:6,13:19:35.26:1001,35,0	1/1:4,19:23:17.11:545,17,0	1/1:1,7:8:12.04:362,12,0
chr10	15793430	.	G	GAGAGAGCA	16102.89	PASS	AB=1.000;AC=44;AF=0.786;AN=56;BaseQRankSum=-4.442;DP=761;FS=2.682;HRun=0;HaplotypeScore=184.6288;InbreedingCoeff=0.0501;MQ=66.19;MQ0=10;MQRankSum=0.491;QD=25.40;ReadPosRankSum=3.194;VQSLOD=4.7047;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:37,0:37:4.34:532,0,4	0/1:17,0:17:64.10:255,0,64	0/0:43,0:20:26.95:0,27,546	0/0:84,0:45:1.31:0,1,531	1/1:32,0:32:38.75:640,39,0	1/1:22,0:22:41.95:991,42,0	1/1:27,0:27:21:542,21,0	1/1:35,0:35:84.08:1247,84,0	1/1:3,31:35:33.11:1295,33,0	0/1:27,0:27:96.76:903,0,97	1/1:11,0:11:14.92:295,15,0	1/1:17,0:17:32.28:725,32,0	1/1:6,24:33:12.04:514,12,0	1/1:3,23:28:24.08:933,24,0	1/1:28,0:28:38.76:773,39,0	0/1:28,0:28:61.92:423,0,62	0/1:26,0:26:62.65:398,0,63	1/1:9,0:9:3.89:36,4,0	1/1:4,15:19:46.36:1240,46,0	1/1:2,9:12:17.88:443,18,0	1/1:5,30:37:5.97:148,6,0	1/1:20,0:20:38:698,38,0	1/1:1,11:17:15.10:450,15,0	1/1:7,38:48:32.28:962,32,0	0/1:21,0:21:17.24:482,0,17	0/1:16,0:16:51.05:640,0,51	1/1:24,0:24:3.79:282,4,0	0/1:8,0:8:36.17:258,0,36
chr10	15794810	.	GC	G	6487.91	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=6.684;DP=547;FS=39.668;HRun=3;HaplotypeScore=59.8769;InbreedingCoeff=0.9967;MQ=78.26;MQ0=0;MQRankSum=-0.182;QD=31.19;ReadPosRankSum=1.197;VQSLOD=2.2535;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,105,1448	1/1:1,10:11:24.07:297,24,0	0/0:6,0:6:14.92:0,15,208	0/0:19,0:19:33.47:0,33,443	1/1:0,10:10:27.08:334,27,0	1/1:3,15:18:36.11:446,36,0	1/1:1,32:33:84.26:1041,84,0	1/1:3,14:17:42.12:507,42,0	0/0:13,0:13:36.12:0,36,518	1/1:3,19:23:54.17:669,54,0	1/1:3,13:16:36.11:444,36,0	0/0:25,0:25:75.20:0,75,1037	0/0:10,0:10:30.10:0,30,429	0/0:25,0:25:75.25:0,75,1073	0/0:20,0:20:57.19:0,57,820	0/0:11,0:11:33.11:0,33,475	1/1:1,47:48:99:1673,135,0	0/0:27,0:27:81.26:0,81,1148	0/0:21,0:21:63.15:0,63,807	0/0:15,0:15:39.12:0,39,540	0/0:24,0:24:63.19:0,63,869	0/0:16,0:16:39.12:0,39,541	0/0:20,0:20:51.17:0,51,733	0/0:27,0:27:78.24:0,78,1087	0/0:23,0:23:66.21:0,66,929	1/1:1,12:13:33.10:409,33,0	1/1:0,10:10:27.08:334,27,0	1/1:0,9:9:27.08:334,27,0
chr10	15795621	.	CT	C	2033.42	PASS	AB=0.957;AC=19;AF=0.339;AN=56;BaseQRankSum=-12.543;DP=514;FS=4.341;HRun=11;HaplotypeScore=105.8912;InbreedingCoeff=0.7438;MQ=78.06;MQ0=1;MQRankSum=0.040;QD=13.12;ReadPosRankSum=1.226;VQSLOD=3.6475;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:47.56:0,48,284	0/0:6,0:6:16.97:0,17,83	0/1:15,1:12:6.19:6,0,97	0/0:25,0:21:23.58:0,24,218	0/0:30,1:31:44.33:0,44,337	0/0:18,0:17:21.26:0,21,209	0/0:12,0:12:34.05:0,34,168	0/0:35,1:36:39.52:0,40,284	1/1:2,7:9:20.96:172,21,0	0/0:22,0:22:37.14:0,37,221	0/0:19,0:19:42.66:0,43,213	0/1:12,1:13:10.92:11,0,109	1/1:3,9:12:17.84:148,18,0	1/1:1,13:14:29.96:246,30,0	0/0:13,0:13:25.98:0,26,139	0/0:21,0:21:8.19:0,8,210	0/0:32,0:32:75.81:0,76,402	0/0:26,0:26:53.33:0,53,313	1/1:8,21:29:62.89:514,63,0	1/1:3,24:27:68.87:565,69,0	1/1:1,8:10:23.01:178,23,0	0/0:11,1:12:6.64:0,7,112	1/1:1,14:15:35.85:296,36,0	1/1:1,3:4:8.99:74,9,0	0/0:17,0:17:31.22:0,31,200	0/0:17,0:17:35.53:0,36,184	0/0:31,0:32:76.48:0,76,414	0/1:6,0:6:21.85:27,0,22
chr10	15796304	.	TCAG	T	9569.07	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=9.770;DP=662;FS=6.610;HRun=0;HaplotypeScore=106.5139;InbreedingCoeff=0.9978;MQ=76.84;MQ0=0;MQRankSum=-2.954;QD=41.60;ReadPosRankSum=0.702;VQSLOD=6.0781;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,117,2616	0/0:6,0:6:18.06:0,18,404	0/0:13,0:13:30.10:0,30,654	0/0:16,0:16:39.13:0,39,870	0/0:14,0:14:42.14:0,42,950	0/0:14,0:14:39.12:0,39,841	0/0:21,0:21:63.22:0,63,1423	0/0:17,0:17:45.15:0,45,1020	1/1:1,32:33:90.31:1497,90,0	0/0:24,0:24:69.24:0,69,1553	0/0:8,0:8:21.07:0,21,476	0/0:47,0:47:99:0,138,3102	1/1:0,31:31:78.27:1299,78,0	1/1:1,33:34:90.31:1498,90,0	0/0:28,0:28:81.28:0,81,1834	0/0:23,0:23:63.22:0,63,1428	0/0:33,0:33:96.31:0,96,2101	0/0:36,0:36:99:0,108,2403	1/1:1,13:14:39.12:621,39,0	1/1:2,15:17:45.14:709,45,0	1/1:2,60:62:99:2604,160,0	0/0:15,0:15:45.15:0,45,1008	1/1:0,16:16:45.15:743,45,0	1/1:3,20:23:36.12:598,36,0	0/0:15,0:15:45.15:0,45,1016	0/0:26,0:26:78.25:0,78,1723	0/0:17,0:17:51.17:0,51,1117	0/0:16,0:16:39.10:0,39,805
chr10	15799905	.	TG	T	8801.67	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-1.253;DP=713;FS=0.000;HRun=1;HaplotypeScore=142.3669;InbreedingCoeff=0.9826;MQ=77.65;MQ0=0;MQRankSum=-0.765;QD=39.83;ReadPosRankSum=3.720;VQSLOD=4.3257;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,114,1822	0/0:14,0:14:42.14:0,42,667	0/0:20,0:20:55.68:0,56,811	0/0:10,0:10:6.07:0,6,362	0/0:31,0:31:93.32:0,93,1483	0/0:19,0:18:57.18:0,57,882	0/0:28,0:28:84.29:0,84,1342	0/0:39,0:39:99:0,117,1830	1/1:0,21:21:57.19:797,57,0	0/0:25,0:25:75.26:0,75,1197	0/0:19,0:19:57.19:0,57,904	0/0:28,0:28:84.29:0,84,1337	1/1:1,22:23:60.20:839,60,0	1/1:0,28:28:84.28:1173,84,0	0/0:34,0:34:99:0,102,1605	0/0:20,0:20:60.20:0,60,959	0/0:24,0:24:72.23:0,72,1121	0/0:17,0:17:45.15:0,45,719	1/1:0,26:26:75.25:1049,75,0	1/1:0,19:19:57.19:797,57,0	1/1:0,51:51:99:2055,147,0	0/0:26,0:26:78.27:0,78,1244	1/1:0,23:23:63.21:881,63,0	1/1:0,30:30:87.29:1211,87,0	0/0:26,0:26:78.27:0,78,1247	0/0:31,0:31:93.30:0,93,1442	0/0:34,0:34:99:0,99,1512	0/0:9,0:9:27.09:0,27,428
chr10	15800529	.	GGGT	G	3164.41	PASS	AB=0.982;AC=37;AF=0.661;AN=56;BaseQRankSum=-5.681;DP=351;FS=98.407;HRun=0;HaplotypeScore=75.8792;InbreedingCoeff=0.7176;MQ=79.37;MQ0=1;MQRankSum=-4.128;QD=14.72;ReadPosRankSum=-2.812;VQSLOD=-0.6641;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:17,1:18:17.93:250,0,18	1/1:2,0:2:3:26,3,0	0/0:18,0:15:22.36:0,22,378	0/1:10,0:9:2.59:3,0,90	1/1:2,6:8:11.95:140,12,0	1/1:2,1:3:5.61:61,6,0	1/1:8,13:21:24.18:262,24,0	1/1:9,2:11:23.98:256,24,0	0/0:19,0:19:33.23:0,33,95	1/1:7,0:7:15:172,15,0	1/1:4,1:5:9.03:118,9,0	1/1:15,0:15:23.96:219,24,0	0/0:19,0:19:30.07:0,30,109	0/0:17,0:17:9.93:0,10,97	1/1:12,1:13:17.96:168,18,0	1/1:15,1:16:27.06:286,27,0	1/1:2,11:13:17.90:252,18,0	1/1:18,1:19:27.04:280,27,0	0/0:9,0:9:18.11:0,18,52	0/0:8,0:8:6.97:0,7,23	0/0:34,0:34:38.85:0,39,180	1/1:10,0:10:18.03:179,18,0	0/0:12,0:12:19.11:0,19,55	0/1:7,0:7:3.88:4,0,20	1/1:8,1:9:14.82:120,15,0	1/1:2,5:7:9.02:121,9,0	1/1:2,12:14:11.98:197,12,0	1/1:3,4:7:18.04:254,18,0
chr10	15800530	.	GGT	G	3778.69	PASS	AB=1.000;AC=51;AF=0.911;AN=56;BaseQRankSum=1.998;DP=346;FS=11.584;HRun=0;HaplotypeScore=68.2481;InbreedingCoeff=0.3643;MQ=78.50;MQ0=1;MQRankSum=-3.196;QD=11.49;ReadPosRankSum=5.478;VQSLOD=2.1990;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:18,0:18:16.63:235,0,17	1/1:2,0:2:3:26,3,0	0/0:17,0:14:22.09:0,22,331	0/1:10,0:9:2.67:3,0,78	1/1:8,0:8:11.94:99,12,0	1/1:3,0:3:6.47:54,6,0	1/1:18,3:21:21.95:170,22,0	1/1:11,0:11:23.96:204,24,0	1/1:19,0:19:46.26:215,46,0	1/1:6,0:6:14.99:132,15,0	1/1:5,0:5:8.98:78,9,0	1/1:15,0:15:23.88:185,24,0	1/1:19,0:19:24.66:207,25,0	0/1:17,0:17:3.61:130,0,4	1/1:13,0:13:17.93:145,18,0	1/1:16,0:16:26.98:233,27,0	1/1:12,1:13:18.02:184,18,0	1/1:19,0:19:27.45:233,27,0	1/1:9,0:9:22.54:92,23,0	1/1:7,0:7:19.61:129,20,0	1/1:34,0:34:7.78:195,8,0	1/1:10,0:10:17.90:138,18,0	1/1:12,0:12:30.93:165,31,0	1/1:7,0:7:19.29:88,19,0	1/1:9,0:9:14.67:101,15,0	1/1:6,0:6:9.45:75,9,0	1/1:13,0:13:11.78:105,12,0	1/1:6,1:7:17.99:158,18,0
chr10	15800531	.	GT	G	1952.05	PASS	AB=0.962;AC=38;AF=0.679;AN=56;BaseQRankSum=2.473;DP=344;FS=96.954;HRun=1;HaplotypeScore=69.1334;InbreedingCoeff=0.6876;MQ=77.46;MQ0=1;MQRankSum=-4.677;QD=9.00;ReadPosRankSum=-2.773;VQSLOD=-0.3048;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:17,1:18:2.27:213,0,2	1/1:1,1:2:3:26,3,0	0/0:17,0:14:25.02:0,25,304	0/1:8,1:8:3.47:3,0,49	1/1:6,2:8:11.90:84,12,0	1/1:3,0:3:6.45:49,6,0	1/1:18,3:21:22.44:146,22,0	1/1:12,0:12:26.88:212,27,0	0/0:19,0:19:37.78:0,38,155	1/1:0,6:6:14.97:127,15,0	1/1:5,0:5:8.89:60,9,0	1/1:12,3:15:23.53:150,24,0	0/0:19,0:19:32.38:0,32,165	0/0:17,0:17:27.74:0,28,164	1/1:12,1:13:17.80:121,18,0	1/1:15,1:16:26.66:180,27,0	1/1:13,0:13:17.89:132,18,0	1/1:17,1:18:27.20:186,27,0	0/0:9,0:9:22.62:0,23,104	0/1:7,0:7:4.68:5,0,28	0/0:34,0:34:54.22:0,54,306	1/1:10,0:10:17.49:104,17,0	0/0:12,0:12:8.62:0,9,52	0/1:7,0:7:3.48:3,0,41	1/1:7,2:9:9.60:68,10,0	1/1:5,0:5:8.88:64,9,0	1/1:12,1:13:11.74:82,12,0	1/1:7,0:7:17.91:135,18,0
chr10	15800532	.	TGG	T	4278.09	PASS	AB=0.985;AC=47;AF=0.839;AN=56;BaseQRankSum=1.827;DP=345;FS=17.707;HRun=9;HaplotypeScore=66.4627;InbreedingCoeff=0.4190;MQ=76.22;MQ0=1;MQRankSum=-3.397;QD=13.45;ReadPosRankSum=7.088;VQSLOD=1.0212;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:20,0:21:23.53:24,0,146	0/0:2,0:2:2.97:0,3,20	0/0:17,0:14:23.73:0,24,346	0/0:8,0:7:4.25:0,4,36	1/1:8,0:8:5.38:22,5,0	1/1:3,0:3:1.24:8,1,0	0/1:20,0:21:5.99:25,0,6	1/1:10,0:10:7.37:29,7,0	1/1:0,19:19:51.14:594,51,0	1/1:6,0:6:5.02:18,5,0	1/1:5,0:5:6.72:27,7,0	1/1:15,0:15:14.75:55,15,0	1/1:2,17:19:51.15:593,51,0	1/1:3,14:17:43.89:472,44,0	1/1:13,0:13:11.18:45,11,0	1/1:16,0:16:23.92:97,24,0	1/1:13,0:13:15.61:67,16,0	1/1:18,0:18:6.26:71,6,0	1/1:0,9:9:27.08:314,27,0	1/1:1,6:7:21.06:243,21,0	1/1:3,30:33:69.20:804,69,0	1/1:10,0:10:13.69:50,14,0	1/1:1,11:12:33.10:382,33,0	1/1:1,6:7:21.06:244,21,0	1/1:9,0:9:5.91:21,6,0	0/1:7,0:7:2.94:3,0,45	1/1:13,0:13:8.83:32,9,0	1/1:7,0:7:10.40:38,10,0
chr10	15800540	.	GGT	G	1192.25	PASS	AB=0.985;AC=21;AF=0.375;AN=56;BaseQRankSum=2.383;DP=357;FS=8.684;HRun=0;HaplotypeScore=75.3506;InbreedingCoeff=0.2286;MQ=81.26;MQ0=1;MQRankSum=0.100;QD=6.52;ReadPosRankSum=8.579;VQSLOD=0.6774;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:13.07:0,13,282	0/0:2,0:2:6.01:0,6,62	0/0:22,0:19:44.64:0,45,619	0/0:11,0:10:17.77:0,18,222	1/1:5,2:7:5.53:25,6,0	0/1:2,0:2:4.10:4,0,19	0/0:25,0:25:34.39:0,34,233	0/0:7,0:7:17.49:0,17,107	1/1:19,0:19:46.72:212,47,0	1/1:1,2:3:5.69:43,6,0	0/1:6,0:6:18.62:19,0,21	0/0:17,0:17:2.21:0,2,83	1/1:17,1:18:46.79:248,47,0	1/1:15,0:15:27.48:170,27,0	0/0:14,0:14:13.80:0,14,80	0/0:15,0:15:4.53:0,5,39	0/1:12,0:12:3.59:4,0,40	0/0:19,0:19:20.46:0,20,111	0/1:12,0:12:48.42:78,0,48	1/1:6,1:7:19.47:127,19,0	0/1:34,0:34:18.17:185,0,18	0/0:10,0:10:1.66:0,2,17	0/1:14,1:15:23.58:182,0,24	0/1:10,0:10:39.54:61,0,40	0/1:11,0:11:4.22:4,0,66	0/0:8,0:8:5.61:0,6,161	0/1:11,1:12:4.82:5,0,21	0/0:5,0:5:2.99:0,3,33
chr10	15801205	.	TTTTTTGG	T	3211.27	PASS	AB=0.963;AC=21;AF=0.375;AN=56;BaseQRankSum=-1.408;DP=469;FS=11.824;HRun=0;HaplotypeScore=136.1094;InbreedingCoeff=-0.0549;MQ=45.79;MQ0=33;MQRankSum=-0.519;QD=11.64;ReadPosRankSum=2.666;VQSLOD=2.0969;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:22:6.11:0,6,436	0/1:6,1:7:6.50:185,0,7	0/0:46,0:11:12.82:0,13,156	0/0:38,0:10:13.37:0,13,138	1/1:12,0:11:20.50:226,21,0	0/1:20,1:20:11.91:285,0,12	1/1:7,1:8:14.70:199,15,0	0/1:24,2:21:35.16:497,0,35	0/1:15,0:14:14.69:15,0,281	0/1:16,1:17:29.30:390,0,29	0/1:15,2:17:5.07:368,0,5	0/1:9,0:8:32.59:33,0,154	0/0:9,0:8:11.10:0,11,172	0/1:15,0:14:0.08:0,0,203	0/0:17,0:15:20.99:0,21,262	0/0:13,0:13:30.58:0,31,332	0/1:21,0:20:0.80:328,0,1	0/1:17,0:15:19.57:20,0,297	0/1:20,0:19:29.87:30,0,386	0/0:19,0:18:34.88:0,35,469	0/0:6,0:5:11.64:0,12,91	0/0:11,0:8:18.03:0,18,288	0/0:11,0:10:6.53:0,7,155	0/1:13,0:12:22.27:22,0,82	0/1:16,0:13:36.62:37,0,295	0/1:9,2:10:13.05:315,0,13	0/1:14,0:11:12.87:208,0,13	1/1:16,1:10:19.88:225,20,0
chr10	15801206	.	TTTTTGG	T	5312.72	PASS	AB=1.000;AC=33;AF=0.589;AN=56;BaseQRankSum=-3.243;DP=442;FS=12.770;HRun=0;HaplotypeScore=116.4966;InbreedingCoeff=0.1575;MQ=46.55;MQ0=33;MQRankSum=-1.138;QD=17.08;ReadPosRankSum=3.148;VQSLOD=3.6651;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:22:23.54:24,0,269	1/1:2,5:7:14.93:293,15,0	0/0:42,0:9:16:0,16,126	0/0:35,0:9:9.92:0,10,109	1/1:4,7:10:21.06:346,21,0	1/1:8,11:18:29.88:538,30,0	1/1:3,3:6:14.98:289,15,0	1/1:10,11:18:44.25:681,44,0	0/1:15,0:14:32.96:33,0,161	1/1:4,10:14:37.99:574,38,0	1/1:5,9:14:13.70:469,14,0	0/1:10,0:9:34.65:35,0,107	0/1:7,0:6:12.04:12,0,72	0/1:15,0:14:59.62:60,0,117	0/0:17,0:15:17.19:0,17,141	0/1:13,0:13:7.56:8,0,154	1/1:14,6:19:32.16:565,32,0	0/1:17,0:15:37.42:37,0,177	0/1:20,0:19:99:110,0,229	0/0:19,0:18:22.77:0,23,342	0/0:6,0:5:5.55:0,6,29	0/0:11,0:8:16.44:0,16,200	0/1:12,0:11:9.17:9,0,84	0/1:13,0:12:25.51:26,0,30	0/1:16,0:13:69.20:69,0,195	1/1:5,5:9:3.97:416,4,0	1/1:6,6:9:20.96:365,21,0	1/1:11,5:9:20.92:355,21,0
chr10	15801207	.	TTTTGG	T	4795.64	PASS	AB=0.981;AC=39;AF=0.696;AN=56;BaseQRankSum=1.569;DP=431;FS=2.603;HRun=0;HaplotypeScore=108.7256;InbreedingCoeff=-0.0709;MQ=46.70;MQ0=32;MQRankSum=-2.219;QD=13.40;ReadPosRankSum=5.446;VQSLOD=4.0600;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:22:59.21:59,0,131	1/1:6,0:6:15.05:211,15,0	0/0:40,0:8:6.54:0,7,102	0/0:33,0:9:9.88:0,10,109	1/1:11,0:10:21.07:288,21,0	1/1:17,0:17:30.03:418,30,0	1/1:6,0:6:14.99:207,15,0	1/1:20,1:17:44.64:574,45,0	0/1:15,1:15:79.78:89,0,80	1/1:13,1:14:36.31:466,36,0	1/1:14,0:14:26.07:375,26,0	0/1:10,0:9:49.28:49,0,67	0/1:7,0:6:29.46:45,0,29	0/1:14,1:14:64.90:195,0,65	0/1:17,0:15:26.50:26,0,89	0/1:13,0:13:49.65:50,0,92	1/1:14,3:17:12.73:362,13,0	0/1:15,0:13:50.17:50,0,87	0/1:19,1:19:99:236,0,134	0/1:18,0:17:0.60:1,0,216	1/1:6,0:5:3.86:19,4,0	0/1:12,0:9:1.46:1,0,135	0/1:11,1:11:24.68:59,0,25	1/1:12,0:11:0.82:31,1,0	0/1:16,0:13:74.15:74,0,151	1/1:9,0:8:24.08:331,24,0	1/1:11,1:9:21.07:285,21,0	1/1:14,1:9:21:294,21,0
chr10	15801208	.	TTTGG	T	5111.81	PASS	AB=0.963;AC=40;AF=0.714;AN=56;BaseQRankSum=1.544;DP=427;FS=2.830;HRun=0;HaplotypeScore=101.7938;InbreedingCoeff=-0.0898;MQ=45.21;MQ0=32;MQRankSum=-0.628;QD=14.32;ReadPosRankSum=5.837;VQSLOD=3.9384;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:22:67.22:112,0,67	1/1:6,0:6:15.05:182,15,0	0/0:38,0:7:11.20:0,11,90	0/0:31,0:9:9.78:0,10,92	1/1:11,0:10:21.06:243,21,0	1/1:18,0:17:30.04:343,30,0	1/1:6,0:6:15:177,15,0	1/1:21,0:17:44.26:506,44,0	0/1:16,0:15:30.30:155,0,30	1/1:14,0:14:37.42:434,37,0	1/1:14,0:14:28.29:337,28,0	0/1:10,0:9:39.75:50,0,40	1/1:5,2:6:11.75:153,12,0	0/1:13,1:14:23.38:272,0,23	0/1:17,0:15:45.48:45,0,79	0/1:15,0:15:55.17:157,0,55	1/1:18,0:17:9.77:303,10,0	0/1:13,0:11:35.78:109,0,36	0/1:12,7:18:63.07:372,0,63	0/1:17,1:17:73.89:74,0,93	1/1:3,3:5:5.48:56,5,0	0/1:12,0:9:18.41:18,0,97	0/1:12,0:11:0.84:105,0,1	1/1:6,6:11:1.37:32,1,0	0/1:16,0:13:92.32:92,0,106	1/1:9,0:8:24.07:290,24,0	1/1:13,0:9:21.06:248,21,0	1/1:15,1:9:21:245,21,0
chr10	15801209	.	TTGG	T	5257.62	PASS	AB=0.970;AC=43;AF=0.768;AN=56;BaseQRankSum=0.354;DP=423;FS=2.460;HRun=0;HaplotypeScore=95.4480;InbreedingCoeff=0.0843;MQ=45.36;MQ0=32;MQRankSum=-0.243;QD=14.81;ReadPosRankSum=5.146;VQSLOD=4.5364;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:22:4.98:144,0,5	1/1:6,0:6:15.03:153,15,0	0/0:37,0:6:8.48:0,8,57	0/0:30,0:9:8.82:0,9,69	1/1:11,0:10:21.05:222,21,0	1/1:18,0:17:30.03:298,30,0	1/1:6,0:6:15:150,15,0	1/1:22,0:16:44.89:466,45,0	1/1:13,2:15:11.23:277,11,0	1/1:14,0:14:30.34:390,30,0	1/1:14,0:14:29.28:298,29,0	0/1:11,0:10:5.28:56,0,5	1/1:4,1:4:12.03:130,12,0	1/1:11,2:14:11.62:289,12,0	0/1:18,0:16:33.77:48,0,34	0/1:16,0:16:6.07:219,0,6	1/1:18,0:17:18.56:282,19,0	0/1:14,0:12:0.65:189,0,1	0/1:16,2:17:5.87:408,0,6	0/1:12,1:14:21.89:122,0,22	1/1:5,1:5:5.60:64,6,0	0/1:12,0:9:19.43:19,0,37	1/1:7,5:11:18.53:238,19,0	1/1:9,2:10:1.59:32,2,0	0/1:16,0:13:32.99:99,0,33	1/1:9,0:8:24.06:250,24,0	1/1:13,0:9:21.04:216,21,0	1/1:16,0:9:20.98:199,21,0
chr10	15801210	.	TGG	T	5182.38	PASS	AB=1.000;AC=53;AF=0.946;AN=56;BaseQRankSum=-2.654;DP=387;FS=0.000;HRun=4;HaplotypeScore=85.4790;InbreedingCoeff=0.5460;MQ=46.85;MQ0=32;MQRankSum=-1.005;QD=14.68;ReadPosRankSum=2.195;VQSLOD=1.3222;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,1:18:31.37:212,31,0	1/1:6,0:6:14.98:124,15,0	0/0:33,0:6:4.79:0,5,29	0/1:29,0:9:1.41:1,0,29	1/1:11,0:10:21.01:203,21,0	1/1:15,2:16:29.90:254,30,0	1/1:4,1:5:14.98:124,15,0	1/1:19,2:15:44.96:415,45,0	1/1:4,7:13:26.96:244,27,0	1/1:12,0:12:36.03:367,36,0	1/1:12,1:13:29.94:260,30,0	1/1:2,4:9:17.17:104,17,0	1/1:4,1:4:12:106,12,0	1/1:8,5:13:29.93:252,30,0	1/1:0,7:12:11.79:75,12,0	1/1:7,1:15:37.56:317,38,0	1/1:11,6:16:29.91:248,30,0	1/1:6,1:10:25.68:233,26,0	1/1:13,2:15:39:411,39,0	1/1:8,6:14:11.97:113,12,0	1/1:5,1:5:5.92:43,6,0	1/1:8,1:9:19:167,19,0	1/1:6,6:11:17.99:155,18,0	1/1:9,1:10:3.01:35,3,0	1/1:4,2:9:20.37:153,20,0	1/1:8,1:8:23.99:211,24,0	1/1:10,2:9:20.96:180,21,0	1/1:15,0:8:20.91:174,21,0
chr10	15801390	.	CA	C	5484.66	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=13.226;DP=619;FS=0.000;HRun=6;HaplotypeScore=59.5643;InbreedingCoeff=0.9140;MQ=67.29;MQ0=0;MQRankSum=0.002;QD=28.42;ReadPosRankSum=0.318;VQSLOD=5.2444;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:56:99:0,156,2007	0/0:9,0:9:24.08:0,24,316	0/1:6,0:6:13.19:13,0,133	0/0:8,0:7:12:0,12,125	0/0:28,0:28:75.23:0,75,973	0/0:22,0:22:63.20:0,63,829	0/0:14,0:14:42.14:0,42,553	0/0:29,0:29:81.26:0,81,1053	1/1:0,28:28:78.20:838,78,0	0/0:27,0:27:69.21:0,69,882	0/0:25,0:25:75.23:0,75,973	0/0:20,0:19:54.18:0,54,710	1/1:2,19:21:57.14:612,57,0	1/1:0,26:26:63.16:677,63,0	0/0:33,0:32:84.22:0,84,1073	0/0:25,0:25:60.20:0,60,790	0/0:28,0:28:72.23:0,72,946	0/0:19,0:19:51.17:0,51,671	1/1:4,19:23:57.11:603,57,0	1/1:0,25:25:72.18:774,72,0	1/1:1,15:16:45.11:484,45,0	0/0:16,0:16:45.15:0,45,592	1/1:0,17:17:48.12:516,48,0	1/1:1,30:31:90.23:967,90,0	0/0:21,0:21:57.16:0,57,734	0/0:15,0:15:39.13:0,39,513	0/0:20,0:19:45.15:0,45,591	0/0:11,0:11:33.11:0,33,434
chr10	15802403	.	AGAGAGCAGACTC	A	11844.05	PASS	AB=0.971;AC=17;AF=0.304;AN=56;BaseQRankSum=15.738;DP=729;FS=3.979;HRun=0;HaplotypeScore=260.7634;InbreedingCoeff=0.9136;MQ=88.88;MQ0=0;MQRankSum=-15.765;QD=53.59;ReadPosRankSum=2.716;VQSLOD=4.5271;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,154,8481	0/0:17,0:17:42.14:0,42,2558	0/0:35,0:35:96.32:0,96,4451	0/0:30,0:30:81.23:0,81,3935	0/0:13,0:13:39.11:0,39,2037	0/0:19,0:19:57.18:0,57,2827	0/0:38,0:38:99:0,111,6532	0/0:26,0:26:72.25:0,72,3864	1/1:10,17:27:51.17:1923,51,0	0/0:30,0:30:90.31:0,90,4958	0/0:18,0:18:54.17:0,54,2710	0/0:30,0:30:90.31:0,90,4893	1/1:3,25:28:15.50:2121,15,0	1/1:3,21:24:57.20:2127,57,0	0/0:38,0:38:99:0,111,6682	0/1:32,1:33:14.67:15,0,5372	0/0:39,0:39:99:0,114,6510	0/0:16,0:16:48.16:0,48,2789	1/1:8,14:22:42.12:1504,42,0	1/1:5,6:11:18.06:655,18,0	1/1:17,27:44:51.17:1741,51,0	0/0:16,0:16:42.14:0,42,2355	1/1:3,9:12:21.07:749,21,0	1/1:3,17:20:27.08:1009,27,0	0/0:22,0:22:63.22:0,63,3387	0/0:26,0:26:78.27:0,78,4314	0/0:28,0:28:84.29:0,84,4480	0/0:15,0:15:45.15:0,45,2657
chr10	15802706	.	CG	C	5260.58	PASS	AB=0.533;AC=53;AF=0.946;AN=56;BaseQRankSum=-0.310;DP=369;FS=0.000;HRun=3;HaplotypeScore=100.0510;InbreedingCoeff=0.5286;MQ=37.06;MQ0=17;MQRankSum=-2.650;QD=14.45;ReadPosRankSum=1.722;VQSLOD=3.9756;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:19,14:31:85.79:631,86,0	1/1:4,1:5:5.96:46,6,0	1/1:10,0:1:2.88:15,3,0	0/0:5,0:3:8.36:0,8,41	1/1:10,1:10:26.63:181,27,0	1/1:10,2:12:26.48:202,26,0	1/1:8,5:13:1.53:165,2,0	1/1:13,3:14:29.85:229,30,0	1/1:10,4:14:35.75:268,36,0	1/1:10,3:13:29.81:227,30,0	1/1:6,2:8:14.62:96,15,0	1/1:8,3:11:25.11:188,25,0	1/1:11,1:10:20.77:146,21,0	1/1:12,2:11:32.58:224,33,0	1/1:9,5:14:35.80:290,36,0	1/1:13,3:15:29.85:234,30,0	1/1:17,5:22:43.91:315,44,0	1/1:3,9:8:8.59:82,9,0	1/1:14,2:16:41.58:306,42,0	1/1:7,3:9:17.49:110,17,0	1/1:6,1:7:5.99:50,6,0	1/1:10,1:11:23.70:169,24,0	0/1:1,7:8:0:0,0,0	1/1:15,4:19:35.41:250,35,0	1/1:13,2:15:35.34:248,35,0	1/1:16,0:17:38.74:287,39,0	1/1:9,3:11:14.87:188,15,0	1/1:8,1:7:14.89:114,15,0
chr10	15802708	.	GGAAAA	G	6724.27	PASS	AB=1.000;AC=48;AF=0.857;AN=56;BaseQRankSum=3.634;DP=354;FS=24.010;HRun=0;HaplotypeScore=114.7283;InbreedingCoeff=0.5141;MQ=39.60;MQ0=17;MQRankSum=-1.697;QD=20.50;ReadPosRankSum=6.157;VQSLOD=2.6884;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:33,0:31:82.25:863,82,0	1/1:4,0:4:3.89:64,4,0	0/0:14,0:3:6.02:0,6,96	0/0:5,0:3:9.03:0,9,188	1/1:10,0:9:26.65:201,27,0	1/1:11,0:12:26.54:241,27,0	0/1:10,0:10:25.46:247,0,25	1/1:13,0:11:29.87:294,30,0	1/1:11,1:12:35.81:375,36,0	1/1:15,0:14:25.52:283,26,0	1/1:7,0:7:12.63:114,13,0	1/1:10,0:10:25.15:251,25,0	1/1:9,0:7:20.79:166,21,0	1/1:14,0:11:32.62:286,33,0	1/1:12,1:13:35.76:417,36,0	1/1:15,1:14:21.53:325,22,0	1/1:18,0:20:10.19:420,10,0	1/1:12,0:8:7.66:143,8,0	1/1:14,2:16:38.84:354,39,0	1/1:10,1:10:17.12:152,17,0	0/1:8,0:7:5.57:37,0,6	1/1:9,1:11:23.13:182,23,0	0/0:7,0:7:1.61:0,2,5	1/1:18,1:19:33.03:331,33,0	1/1:14,0:14:35.06:289,35,0	1/1:18,0:18:36.51:303,37,0	1/1:10,0:11:14.64:274,15,0	1/1:9,0:7:11.08:114,11,0
chr10	15802719	.	AAAAAAAAAAG	A	5285.24	PASS	AB=0.989;AC=29;AF=0.518;AN=56;BaseQRankSum=8.903;DP=487;FS=7.988;HRun=0;HaplotypeScore=200.1201;InbreedingCoeff=-0.3679;MQ=46.75;MQ0=16;MQRankSum=0.659;QD=12.04;ReadPosRankSum=2.096;VQSLOD=3.1057;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:38,0:37:99:537,0,145	0/1:5,0:5:0.05:98,0,0	0/0:21,0:7:17.83:0,18,554	0/0:9,0:5:15.05:0,15,497	0/1:13,0:12:5.21:91,0,5	1/1:11,0:11:7.58:177,8,0	0/1:12,0:12:40.12:306,0,40	0/1:24,1:23:17.76:293,0,18	0/1:20,0:20:51.12:287,0,51	1/1:19,0:18:16.26:341,16,0	1/1:10,0:10:10.55:159,11,0	0/1:16,0:16:62.58:161,0,63	0/1:15,0:14:27.32:27,0,129	0/1:21,0:18:99:169,0,105	0/1:20,1:21:86.68:330,0,87	0/1:16,0:15:70.55:243,0,71	0/1:27,1:28:48.96:535,0,49	0/1:17,0:13:45.20:114,0,45	0/1:23,0:22:99:210,0,170	0/1:19,1:20:77.61:105,0,78	0/0:7,0:6:15.44:0,15,94	0/1:15,0:15:45.03:45,0,74	0/0:11,0:11:7.62:0,8,46	0/1:25,1:26:32.38:207,0,32	0/1:17,0:17:43.57:125,0,44	1/1:23,0:23:4.19:259,4,0	1/1:16,0:15:9.33:364,9,0	0/1:12,0:11:50.62:100,0,51
chr10	15802720	.	AAAAAAAAAG	A	7933.14	PASS	AB=0.940;AC=40;AF=0.714;AN=56;BaseQRankSum=7.185;DP=492;FS=0.000;HRun=0;HaplotypeScore=185.1200;InbreedingCoeff=0.1366;MQ=47.41;MQ0=16;MQRankSum=0.296;QD=17.47;ReadPosRankSum=1.813;VQSLOD=3.7150;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:37,1:37:15:929,15,0	0/1:5,1:6:4.20:121,0,4	0/0:22,0:8:20.84:0,21,506	0/0:9,0:5:15.05:0,15,450	1/1:13,0:12:14.30:153,14,0	1/1:9,2:11:13.53:187,14,0	0/1:9,3:12:32.66:282,0,33	1/1:23,2:23:26.30:384,26,0	1/1:20,0:20:16.66:503,17,0	1/1:8,11:18:25.31:389,25,0	1/1:8,2:10:17.87:183,18,0	1/1:17,0:17:0.43:296,0,0	0/1:15,0:14:14.08:169,0,14	1/1:21,0:18:24.42:345,24,0	1/1:21,0:21:28.28:592,28,0	0/1:15,1:15:1.32:369,0,1	0/1:25,4:29:34.71:597,0,35	1/1:18,0:14:15.95:265,16,0	0/1:24,0:23:26.93:365,0,27	0/1:20,0:20:23.63:177,0,24	0/0:7,0:6:12.04:0,12,37	0/1:16,0:16:8.82:119,0,9	0/1:11,0:11:4.54:41,0,5	1/1:25,0:25:15.44:324,15,0	1/1:17,0:17:20.64:257,21,0	1/1:7,16:23:33.12:353,33,0	1/1:12,3:14:27.37:368,27,0	0/1:11,1:11:24.94:164,0,25
chr10	15802721	.	AAAAAAAAG	A	8035.61	PASS	AB=0.991;AC=46;AF=0.821;AN=56;BaseQRankSum=7.678;DP=481;FS=0.645;HRun=0;HaplotypeScore=173.7176;InbreedingCoeff=0.4729;MQ=47.83;MQ0=16;MQRankSum=1.641;QD=18.14;ReadPosRankSum=3.313;VQSLOD=4.2780;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:24,13:36:52.87:884,53,0	0/1:6,0:6:2.13:112,0,2	0/0:22,0:8:21.07:0,21,451	0/0:9,0:5:15.05:0,15,395	1/1:12,1:12:14.47:137,14,0	1/1:11,0:11:16.64:192,17,0	0/1:13,0:13:16.87:302,0,17	1/1:23,0:21:26.68:376,27,0	1/1:15,4:19:36.68:491,37,0	1/1:16,1:16:28.53:361,29,0	1/1:10,0:10:18.82:176,19,0	1/1:15,3:18:26.41:360,26,0	1/1:14,1:14:18.99:232,19,0	1/1:18,3:18:32.10:362,32,0	1/1:17,4:21:38.56:557,39,0	1/1:14,2:15:16.54:383,17,0	0/1:27,1:28:16.89:534,0,17	1/1:14,3:13:25.56:315,26,0	1/1:23,1:23:37.19:390,37,0	1/1:19,1:20:11.36:227,11,0	0/0:6,1:6:9.50:0,9,24	1/1:13,1:14:11.15:151,11,0	1/1:11,0:11:2.04:60,2,0	1/1:21,3:24:21.91:316,22,0	1/1:15,2:17:25.95:266,26,0	1/1:21,1:22:35.04:351,35,0	1/1:15,0:14:29.54:360,30,0	0/1:11,0:10:18.75:137,0,19
chr10	15802722	.	AAAAAAAG	A	7739.35	PASS	AB=0.972;AC=47;AF=0.839;AN=56;BaseQRankSum=7.144;DP=448;FS=0.000;HRun=0;HaplotypeScore=159.1711;InbreedingCoeff=0.6034;MQ=49.48;MQ0=16;MQRankSum=1.676;QD=18.88;ReadPosRankSum=3.340;VQSLOD=3.8674;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:37,0:36:56.63:799,57,0	1/1:6,0:6:10:120,10,0	0/0:22,0:8:21.05:0,21,399	0/0:9,0:5:15.05:0,15,356	1/1:11,0:10:14.73:129,15,0	1/1:8,0:8:20.87:209,21,0	0/1:10,1:11:4.28:269,0,4	1/1:18,0:17:36.06:370,36,0	1/1:18,0:18:39.15:454,39,0	1/1:14,0:13:31.40:346,31,0	1/1:10,0:10:23.72:193,24,0	1/1:18,0:18:32.29:363,32,0	1/1:15,0:14:34.26:290,34,0	1/1:21,0:18:32.37:337,32,0	1/1:21,0:21:41.03:515,41,0	1/1:15,1:15:21.42:351,21,0	0/1:24,0:26:6.79:491,0,7	1/1:17,0:13:25.99:289,26,0	1/1:10,11:20:34.33:391,34,0	1/1:17,1:18:27.30:240,27,0	0/0:7,0:6:6.40:0,6,16	1/1:15,0:15:14.36:149,14,0	1/1:9,0:9:4.69:64,5,0	1/1:24,0:24:22.19:287,22,0	1/1:17,0:17:29.19:270,29,0	1/1:19,0:19:37.82:348,38,0	1/1:11,0:11:29.90:337,30,0	0/1:9,0:8:1.55:128,0,2
chr10	15802723	.	AAAAAAG	A	7524.19	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=6.156;DP=403;FS=0.000;HRun=0;HaplotypeScore=138.8217;InbreedingCoeff=0.8434;MQ=51.81;MQ0=16;MQRankSum=-0.045;QD=20.45;ReadPosRankSum=1.751;VQSLOD=4.5273;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:27:58.86:727,59,0	1/1:6,0:6:14.74:137,15,0	0/0:22,0:8:21.07:0,21,340	0/0:9,0:5:15.05:0,15,297	1/1:11,0:10:17.80:143,18,0	1/1:8,0:8:20.88:197,21,0	1/1:12,0:12:11.21:278,11,0	1/1:19,0:18:40.31:379,40,0	1/1:17,0:17:43.54:452,44,0	1/1:14,0:13:31.97:329,32,0	1/1:9,0:9:23.81:187,24,0	1/1:16,0:16:33.70:348,34,0	1/1:13,0:12:35.89:306,36,0	1/1:17,0:14:32.74:320,33,0	1/1:18,0:18:43.08:483,43,0	1/1:12,0:11:29.11:350,29,0	1/1:26,0:26:10.40:484,10,0	1/1:17,0:13:26.23:272,26,0	1/1:18,0:17:28.90:366,29,0	1/1:4,14:18:29.79:247,30,0	0/0:4,0:3:2.66:0,3,5	1/1:13,0:13:14.62:135,15,0	1/1:9,0:9:6.36:67,6,0	1/1:19,0:19:23.13:264,23,0	1/1:11,0:11:29.77:258,30,0	1/1:18,0:18:38.07:342,38,0	1/1:10,0:10:29.97:313,30,0	1/1:9,0:8:14.71:139,15,0
chr10	15802728	.	AG	A	5617.04	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=2.614;DP=386;FS=1.187;HRun=1;HaplotypeScore=116.2531;InbreedingCoeff=0.8584;MQ=56.71;MQ0=10;MQRankSum=-4.014;QD=15.91;ReadPosRankSum=-0.313;VQSLOD=4.7472;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:27:64.25:392,64,0	1/1:6,0:6:17.75:132,18,0	0/0:24,0:10:24.20:0,24,212	0/0:9,0:5:7.62:0,8,89	1/1:1,9:10:17.64:112,18,0	1/1:8,0:8:20.34:135,20,0	1/1:11,0:11:28.87:173,29,0	1/1:5,19:23:60.42:433,60,0	1/1:16,0:16:45.06:300,45,0	1/1:13,0:13:35.22:255,35,0	1/1:2,8:10:23.55:156,24,0	1/1:14,0:14:37.08:262,37,0	1/1:12,0:12:35.68:275,36,0	1/1:13,0:11:32.29:226,32,0	1/1:17,0:17:45.44:302,45,0	1/1:13,0:12:34.85:237,35,0	1/1:24,0:24:54.42:346,54,0	1/1:14,0:11:29.75:199,30,0	1/1:16,0:15:39.18:287,39,0	1/1:18,0:18:29.42:189,29,0	1/1:4,0:3:4.77:30,5,0	1/1:2,9:11:14.59:90,15,0	1/1:8,0:8:14.59:98,15,0	1/1:18,0:18:29.01:190,29,0	1/1:10,0:10:29.40:196,29,0	1/1:18,0:18:38.43:312,38,0	1/1:11,0:11:28.83:187,29,0	1/1:7,0:7:14.74:104,15,0
chr10	15804718	.	TTACCTGGGAAAG	T	12428.45	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=16.098;DP=673;FS=1.697;HRun=0;HaplotypeScore=238.7556;InbreedingCoeff=0.9964;MQ=69.15;MQ0=0;MQRankSum=-15.921;QD=77.20;ReadPosRankSum=2.810;VQSLOD=4.7254;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,35:40:84.29:3075,84,0	0/0:14,0:14:42.14:0,42,2487	0/0:26,0:26:66.23:0,66,3564	0/0:20,0:20:57.16:0,57,3125	0/0:14,0:14:42.14:0,42,2490	0/0:23,0:23:69.24:0,69,4181	0/0:23,0:23:69.24:0,69,4176	0/0:40,0:40:99:0,111,6353	0/0:31,0:31:93.32:0,93,5665	0/0:31,0:31:93.32:0,93,5649	0/0:14,0:14:42.14:0,42,2528	1/1:3,18:21:42.14:1564,42,0	0/0:20,0:20:57.20:0,57,3326	0/0:27,0:27:75.26:0,75,4303	1/1:1,21:22:51.18:1902,51,0	1/1:4,24:28:57.20:2124,57,0	0/0:30,0:30:84.29:0,84,4958	1/1:2,10:12:24.08:895,24,0	0/0:23,0:23:57.19:0,57,2968	0/0:37,0:37:99:0,105,6238	0/0:28,0:27:81.28:0,81,4703	1/1:4,22:26:57.15:1974,57,0	0/0:19,0:19:51.16:0,51,2918	0/0:32,0:32:96.33:0,96,5538	1/1:2,10:12:24.08:895,24,0	0/0:31,0:31:93.32:0,93,5498	0/0:24,0:24:72.25:0,72,4138	0/0:5,0:5:15.05:0,15,864
chr10	15806699	.	C	CT	4451.61	PASS	AB=0.928;AC=49;AF=0.875;AN=56;BaseQRankSum=-0.411;DP=549;FS=16.476;HRun=5;HaplotypeScore=145.5098;InbreedingCoeff=0.4519;MQ=70.23;MQ0=2;MQRankSum=-4.144;QD=9.27;ReadPosRankSum=1.077;VQSLOD=1.6952;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:22,19:40:83.80:875,84,0	1/1:17,0:17:11.83:72,12,0	0/0:31,0:19:23.78:0,24,310	0/0:37,0:25:0.18:0,0,201	1/1:23,0:23:12.40:64,12,0	1/1:19,0:19:27.65:148,28,0	1/1:16,0:15:15.19:76,15,0	1/1:28,0:29:34.05:205,34,0	1/1:13,0:13:8.70:68,9,0	1/1:20,0:21:15.76:65,16,0	1/1:20,0:20:5.45:29,5,0	1/1:7,5:18:20.77:195,21,0	0/1:6,0:6:0.07:0,0,0	1/1:7,0:7:9.47:54,9,0	0/1:13,5:17:2.34:355,0,2	1/1:13,3:16:30.20:289,30,0	1/1:22,0:26:20.44:147,20,0	1/1:11,8:21:24.94:425,25,0	1/1:27,0:28:11.40:103,11,0	0/1:9,0:9:6.24:28,0,6	1/1:11,0:12:8.13:44,8,0	1/1:10,2:12:30.75:304,31,0	1/1:12,0:13:10.35:47,10,0	1/1:18,0:17:24.03:104,24,0	1/1:11,8:17:21.45:300,21,0	1/1:24,0:24:31.68:191,32,0	1/1:23,0:23:39.47:213,39,0	1/1:7,0:7:7.10:52,7,0
chr10	15806704	.	TC	T	4537.27	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-2.574;DP=525;FS=20.829;HRun=1;HaplotypeScore=115.9113;InbreedingCoeff=0.8299;MQ=62.92;MQ0=5;MQRankSum=-4.188;QD=9.78;ReadPosRankSum=1.315;VQSLOD=1.3898;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:39,2:39:83.30:478,83,0	1/1:14,0:14:29.28:165,29,0	0/0:26,0:14:24.91:0,25,375	0/0:35,0:22:11.03:0,11,282	1/1:21,1:22:31.79:199,32,0	1/1:18,0:18:25.67:134,26,0	1/1:15,0:13:19.81:117,20,0	1/1:26,0:26:42.55:286,43,0	1/1:15,0:15:19.09:120,19,0	1/1:20,0:20:28.57:131,29,0	1/1:18,0:18:21.78:139,22,0	1/1:14,0:14:25.72:138,26,0	1/1:6,0:6:3.94:27,4,0	1/1:5,0:5:10.16:54,10,0	1/1:12,4:15:15.07:154,15,0	1/1:14,2:16:27.43:152,27,0	1/1:27,0:27:52.76:269,53,0	1/1:18,3:19:31.24:203,31,0	1/1:29,1:29:59.77:345,60,0	1/1:7,0:7:16.77:93,17,0	1/1:11,0:10:13.54:106,14,0	1/1:9,4:13:32.82:240,33,0	1/1:12,0:12:15.81:106,16,0	1/1:21,0:18:24.80:101,25,0	1/1:20,0:18:26.12:168,26,0	1/1:24,0:22:44.61:284,45,0	1/1:25,0:25:54.28:286,54,0	1/1:7,0:6:9.73:43,10,0
chr10	15806712	.	T	TTC	2002.53	PASS	AB=0.848;AC=23;AF=0.411;AN=56;BaseQRankSum=1.597;DP=532;FS=20.469;HRun=0;HaplotypeScore=132.7801;InbreedingCoeff=-0.2943;MQ=57.74;MQ0=10;MQRankSum=-2.241;QD=5.17;ReadPosRankSum=3.454;VQSLOD=1.3338;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:38:54.44:0,54,393	0/1:8,3:12:15.67:126,0,16	0/1:24,0:12:8.65:9,0,152	0/0:31,0:18:22.17:0,22,219	0/1:8,16:25:50.88:141,0,51	0/1:11,8:20:29.58:160,0,30	0/1:10,6:15:37.48:182,0,37	0/1:23,1:24:90.23:130,0,90	0/1:17,1:18:43.65:44,0,50	0/1:12,10:22:6.12:87,0,6	0/1:13,2:18:54.52:55,0,60	0/1:17,0:17:1.11:1,0,106	0/0:4,4:8:9.51:0,10,50	0/1:5,0:5:17.26:22,0,17	0/0:17,0:16:20.18:0,20,133	0/0:17,0:17:4.63:0,5,120	1/1:23,3:27:7.79:309,8,0	0/1:23,0:21:5.18:5,0,101	0/1:32,1:32:31.50:220,0,31	0/1:6,1:7:1.66:60,0,2	0/1:11,0:8:6.40:6,0,27	0/0:11,0:11:15.13:0,15,105	0/1:4,4:10:0.37:88,0,0	0/1:11,5:16:9.59:274,0,10	0/0:20,0:18:23.50:0,23,156	0/1:21,3:19:49.55:68,0,50	0/1:23,1:25:38.66:119,0,39	1/1:4,1:5:4.56:54,5,0
chr10	15807440	.	T	TCTCC	14976.48	PASS	AB=0.893;AC=49;AF=0.875;AN=56;BaseQRankSum=-2.188;DP=729;FS=1.117;HRun=0;HaplotypeScore=267.6707;InbreedingCoeff=0.4930;MQ=44.07;MQ0=23;MQRankSum=2.858;QD=23.18;ReadPosRankSum=3.279;VQSLOD=4.4843;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:38,0:38:39.48:845,39,0	0/1:19,0:17:22.69:25,0,23	0/0:43,0:15:36.12:0,36,568	0/0:40,0:14:33.10:0,33,516	1/1:23,1:21:11.09:420,11,0	1/1:18,1:19:26.75:712,27,0	1/1:19,1:18:38.97:521,39,0	1/1:36,0:35:96.63:1425,97,0	1/1:22,4:25:45.08:708,45,0	1/1:24,4:27:68.90:1238,69,0	1/1:18,0:18:1.97:49,2,0	0/1:18,16:30:24.41:95,0,24	1/1:24,0:24:33.41:550,33,0	1/1:18,0:17:4.48:235,4,0	1/1:29,1:30:33.58:839,34,0	1/1:27,0:27:45.42:797,45,0	1/1:20,2:21:39.01:664,39,0	1/1:21,1:22:11.17:723,11,0	1/1:18,0:18:46.85:653,47,0	1/1:20,2:22:17.79:169,18,0	1/1:11,0:10:2.99:25,3,0	1/1:39,2:38:51.44:903,51,0	1/1:20,4:21:11.19:268,11,0	0/1:17,0:16:0:0,0,0	1/1:37,2:38:20.41:709,20,0	1/1:20,1:20:57.19:1130,57,0	1/1:32,0:33:22.55:995,23,0	1/1:15,0:11:20.80:282,21,0
chr10	15807444	.	C	CTCTG	2681.06	PASS	AB=0.768;AC=15;AF=0.268;AN=56;BaseQRankSum=-2.781;DP=741;FS=18.819;HRun=0;HaplotypeScore=309.4559;InbreedingCoeff=0.6688;MQ=44.87;MQ0=24;MQRankSum=-6.951;QD=12.59;ReadPosRankSum=-3.753;VQSLOD=1.6304;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:58.98:0,59,862	0/0:10,0:15:2.48:0,2,18	0/0:49,0:20:36.05:0,36,542	0/0:41,0:15:29.90:0,30,411	0/0:7,0:20:20.81:0,21,211	0/0:16,0:17:27.04:0,27,265	0/0:10,0:15:20.79:0,21,161	0/0:25,0:33:7.83:0,8,99	0/1:10,15:25:20.59:545,0,21	0/0:13,0:26:38.98:0,39,353	0/0:6,0:17:8.76:0,9,76	0/1:35,0:31:6.47:6,0,42	1/1:7,16:26:38.94:916,39,0	1/1:7,13:19:24.08:573,24,0	0/0:35,0:35:57.18:0,57,883	0/0:30,0:30:51.14:0,51,756	0/0:17,0:21:33.48:0,33,389	0/0:20,0:22:37.78:0,38,550	1/1:13,6:18:24.51:463,25,0	1/1:8,18:27:6.02:143,6,0	0/1:7,4:12:0:0,0,0	0/0:39,0:36:52.06:0,52,812	1/1:20,8:27:4.94:133,5,0	1/1:7,10:16:3.01:71,3,0	0/0:39,0:38:47.99:0,48,736	0/0:8,0:18:30.02:0,30,276	0/0:24,0:29:54.09:0,54,531	0/0:13,0:9:15.02:0,15,140
chr10	15807447	.	T	TA	1146.40	PASS	AB=0.973;AC=16;AF=0.286;AN=56;BaseQRankSum=5.025;DP=729;FS=7.747;HRun=0;HaplotypeScore=276.1784;InbreedingCoeff=0.4143;MQ=44.94;MQ0=23;MQRankSum=0.500;QD=5.14;ReadPosRankSum=4.120;VQSLOD=2.0101;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:62.88:0,63,832	0/1:15,2:15:30.99:31,0,38	0/0:51,0:22:57.19:0,57,797	0/0:41,0:16:45.57:0,46,585	0/1:23,0:20:37.77:127,0,38	1/1:17,1:18:26.07:180,26,0	0/1:16,1:15:99:165,0,120	0/1:29,0:28:16.22:16,0,686	0/0:23,0:22:32.55:0,33,190	0/1:25,0:24:99:103,0,158	0/1:16,0:16:24.10:58,0,24	0/0:34,0:30:5.26:0,5,135	0/0:26,0:26:48.67:0,49,345	0/0:20,0:19:18.93:0,19,141	0/0:35,0:35:69.19:0,69,927	0/0:32,0:32:60.53:0,61,780	1/1:19,0:18:24.68:197,25,0	0/0:20,0:20:46.72:0,47,600	0/0:19,0:18:40.14:0,40,557	0/0:27,0:27:19.73:0,20,85	0/0:14,0:13:3.01:0,3,42	0/0:40,0:37:59.99:0,60,833	0/0:30,0:28:12.62:0,13,64	0/0:19,0:18:6.22:0,6,16	0/0:40,0:39:55.51:0,56,732	1/1:19,0:18:39.18:206,39,0	1/1:27,0:27:30.75:214,31,0	1/1:13,0:9:10.89:32,11,0
chr10	15808239	.	CGCTCGT	C	6662.62	PASS	AB=1.000;AC=44;AF=0.786;AN=56;BaseQRankSum=2.620;DP=360;FS=0.000;HRun=0;HaplotypeScore=188.1508;InbreedingCoeff=0.4704;MQ=52.08;MQ0=8;MQRankSum=-2.765;QD=22.74;ReadPosRankSum=4.830;VQSLOD=3.8138;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:16,16:30:35.02:515,35,0	1/1:8,0:8:15.01:263,15,0	0/0:9,0:4:8:0,8,70	0/0:16,0:11:4.23:0,4,21	0/0:10,0:10:0:0,0,0	1/1:24,0:24:27.23:760,27,0	1/1:8,0:8:5.99:122,6,0	1/1:23,0:23:50.91:796,51,0	1/1:9,0:8:11.61:170,12,0	1/1:6,0:6:15.02:244,15,0	1/1:11,0:11:9.03:174,9,0	1/1:3,5:6:11.80:207,12,0	1/1:11,0:11:24.04:282,24,0	1/1:10,0:10:15.05:207,15,0	1/1:3,7:9:12.04:214,12,0	1/1:2,3:4:5.61:63,6,0	1/1:13,0:11:24.08:484,24,0	1/1:7,3:8:10.44:215,10,0	0/1:14,0:14:15.51:242,0,16	0/1:25,0:25:51.68:71,0,52	0/0:20,0:16:2.90:0,3,24	1/1:0,9:9:1.31:2,1,0	0/0:12,0:12:3:0,3,25	1/1:9,0:9:2.77:34,3,0	1/1:5,10:13:21.58:393,22,0	1/1:13,0:13:36.06:569,36,0	1/1:13,0:13:21.07:396,21,0	1/1:7,0:7:14.97:239,15,0
chr10	15808240	.	GCT	G	2955.90	PASS	AB=1.000;AC=26;AF=0.464;AN=56;BaseQRankSum=-1.942;DP=353;FS=15.852;HRun=0;HaplotypeScore=187.1953;InbreedingCoeff=0.5525;MQ=51.91;MQ0=8;MQRankSum=-1.147;QD=15.08;ReadPosRankSum=0.417;VQSLOD=2.2080;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:32,0:30:10.80:29,0,11	1/1:1,7:8:15.01:183,15,0	0/0:9,0:4:6.02:0,6,93	0/0:15,0:11:2.78:0,3,15	0/0:1,9:10:0:0,0,0	1/1:2,22:24:39.13:564,39,0	1/1:1,7:8:6.02:86,6,0	1/1:6,16:22:51.17:716,51,0	0/0:9,0:8:9.90:0,10,43	1/1:1,4:5:15.05:196,15,0	1/1:0,11:11:9.03:119,9,0	0/1:8,0:6:1.66:2,0,2	0/0:10,0:10:22.32:0,22,125	0/0:10,0:10:12.97:0,13,57	1/1:10,0:9:1.18:11,1,0	0/0:5,0:4:1.53:0,2,4	1/1:4,9:11:24.08:329,24,0	0/0:10,0:8:1.02:0,1,66	0/0:12,0:12:25.70:0,26,184	0/0:25,0:25:11.03:0,11,83	0/0:20,0:16:3:0,3,31	0/1:9,0:9:0.03:0,0,0	0/0:12,0:12:3.01:0,3,31	0/0:9,0:9:2.84:0,3,14	0/1:15,0:13:7.93:8,0,30	1/1:2,11:13:36.05:416,36,0	1/1:3,8:11:21.07:281,21,0	1/1:1,6:7:15.05:191,15,0
chr10	15808258	.	A	ATG	248.44	PASS	AB=0.886;AC=16;AF=0.286;AN=56;BaseQRankSum=-0.836;DP=423;FS=15.228;HRun=0;HaplotypeScore=226.5296;InbreedingCoeff=0.3795;MQ=40.62;MQ0=16;MQRankSum=-0.095;QD=1.36;ReadPosRankSum=1.239;VQSLOD=1.4360;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:33:0.85:0,1,5	0/0:8,0:8:9.62:0,10,94	1/1:6,0:3:1.82:5,2,0	0/0:8,0:3:2.37:0,2,8	0/1:18,0:16:0.03:0,0,0	0/0:23,0:23:20.54:0,21,74	0/0:16,0:12:5.02:0,5,44	0/0:24,0:23:56.13:0,56,431	1/1:11,3:13:10.88:99,11,0	0/0:9,0:9:18:0,18,131	0/0:12,0:12:5.14:0,5,45	0/1:11,0:9:11.34:15,0,11	0/1:10,4:14:41.69:42,0,51	1/1:11,5:15:5.06:44,5,0	0/0:14,0:13:0.47:0,0,1	0/0:8,0:7:5.93:0,6,40	0/0:25,0:22:30.03:0,30,265	0/0:8,0:6:17.42:0,17,112	0/1:10,2:12:91.28:100,0,91	1/1:23,4:27:7.76:76,8,0	0/1:20,4:20:0.10:0,0,0	0/1:12,0:12:0.03:0,0,0	0/1:9,1:10:0:0,0,0	0/1:10,7:15:0.05:0,0,1	0/0:15,0:13:5.92:0,6,40	0/0:16,0:16:44.14:0,44,385	0/0:10,0:10:16.99:0,17,141	0/0:9,0:8:11.36:0,11,109
chr10	15808263	.	CACA	C	4093	PASS	AB=0.672;AC=43;AF=0.796;AN=54;BaseQRankSum=2.867;DP=446;FS=8.471;HRun=0;HaplotypeScore=210.4616;InbreedingCoeff=0.1767;MQ=37.20;MQ0=28;MQRankSum=-1.981;QD=9.96;ReadPosRankSum=1.436;VQSLOD=2.4966;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:33:11.79:54,12,0	1/1:0,5:8:12.04:183,12,0	./.	0/0:12,0:2:0:0,0,0	0/1:5,10:17:0:0,0,0	1/1:3,10:20:19.76:184,20,0	1/1:11,3:13:9.01:80,9,0	1/1:4,10:19:18.94:594,19,0	0/1:13,0:18:8.16:104,0,8	1/1:0,7:9:24.08:355,24,0	1/1:2,8:12:8.51:85,9,0	1/1:7,0:9:15.27:86,15,0	1/1:6,0:14:6.54:119,7,0	1/1:6,0:15:5.23:67,5,0	1/1:3,1:13:4.07:11,4,0	0/1:2,0:6:0.62:27,0,1	1/1:15,6:22:34.41:394,34,0	1/1:5,0:8:13.41:152,13,0	0/1:6,0:14:11.12:243,0,11	0/1:13,0:27:20.95:21,0,70	0/1:20,0:22:0.16:0,0,0	1/1:1,0:12:0.47:1,0,0	0/0:4,0:12:2.03:0,2,6	1/1:16,0:16:4.22:18,4,0	1/1:4,0:13:10.09:76,10,0	1/1:2,11:17:51.16:777,51,0	1/1:2,5:10:20.85:273,21,0	0/1:6,4:9:5.01:190,0,5
chr10	15808265	.	CA	C	2143.82	PASS	AB=0.947;AC=36;AF=0.643;AN=56;BaseQRankSum=2.685;DP=457;FS=0.000;HRun=1;HaplotypeScore=212.3411;InbreedingCoeff=0.1464;MQ=35.62;MQ0=30;MQRankSum=-4.125;QD=5.84;ReadPosRankSum=2.691;VQSLOD=0.4663;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:35,0:33:1.66:7,2,0	1/1:8,0:8:12.02:123,12,0	0/0:12,0:2:3.01:0,3,36	0/0:15,0:2:0:0,0,0	0/1:17,2:17:0:0,0,0	1/1:18,2:20:14.15:90,14,0	1/1:8,9:13:3.96:43,4,0	0/1:20,2:21:44.85:417,0,45	0/1:20,0:19:14.48:14,0,49	1/1:9,0:9:23.83:249,24,0	1/1:11,1:12:3.45:29,3,0	1/1:12,0:9:9.41:35,9,0	0/1:14,0:14:20.28:20,0,24	0/1:16,0:15:17.90:18,0,18	0/1:13,0:13:0.26:0,0,0	1/1:7,0:6:4.40:19,4,0	1/1:14,10:22:26.84:212,27,0	1/1:9,0:8:8.44:73,8,0	0/1:14,0:14:56.49:124,0,56	0/1:27,0:27:0.08:0,0,69	0/0:31,0:24:0.25:0,0,0	0/1:13,0:12:0:0,0,0	0/0:12,0:12:2.03:0,2,6	0/0:20,0:17:1.80:0,2,6	1/1:14,0:14:5.64:28,6,0	1/1:15,2:17:50.66:551,51,0	1/1:8,2:10:15.65:112,16,0	0/1:6,4:9:4.25:113,0,4
chr10	15808269	.	CA	C	946.62	PASS	AB=0.907;AC=18;AF=0.333;AN=54;BaseQRankSum=-1.319;DP=472;FS=8.592;HRun=1;HaplotypeScore=219.1191;InbreedingCoeff=0.3059;MQ=34.78;MQ0=27;MQRankSum=-1.094;QD=4.73;ReadPosRankSum=-0.112;VQSLOD=-0.4660;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:33:4.48:0,4,23	0/1:9,0:9:1.70:2,0,42	0/0:15,0:3:6.02:0,6,75	./.	0/0:19,0:17:6.01:0,6,76	0/1:20,0:20:3.93:4,0,121	0/0:18,0:14:5.49:0,5,68	0/0:24,0:23:59.91:0,60,534	1/1:9,12:20:21.30:298,21,0	0/0:10,0:10:27.04:0,27,271	0/0:12,0:12:5.54:0,6,62	0/0:12,0:10:0.96:0,1,9	1/1:10,4:14:4.11:96,4,0	1/1:12,5:16:14.98:138,15,0	0/1:13,0:12:0:0,0,0	0/1:8,0:7:17.03:17,0,30	0/0:25,0:22:26.59:0,27,317	0/1:7,2:9:36.59:37,0,64	0/1:11,4:15:11.04:244,0,11	1/1:21,6:27:14.73:152,15,0	0/0:27,4:26:0.47:0,0,1	0/1:13,0:12:0:0,0,0	1/1:9,3:12:3.01:40,3,0	0/1:10,12:19:28.68:71,0,29	0/0:14,0:13:1.77:0,2,3	0/0:19,0:19:53.85:0,54,506	0/0:12,0:12:21.03:0,21,215	0/0:11,0:10:20.98:0,21,192
chr10	15808270	.	A	AC	919.45	PASS	AB=0.966;AC=15;AF=0.278;AN=54;BaseQRankSum=-1.685;DP=473;FS=8.712;HRun=1;HaplotypeScore=218.5416;InbreedingCoeff=0.3163;MQ=34.97;MQ0=27;MQRankSum=1.005;QD=4.81;ReadPosRankSum=-0.351;VQSLOD=-0.6245;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:33:5.13:0,5,24	0/0:9,0:9:6.90:0,7,70	0/0:14,0:3:6.02:0,6,76	./.	0/0:19,0:17:5.95:0,6,76	0/0:20,0:20:9.34:0,9,144	0/0:18,0:14:5.51:0,6,74	0/0:24,0:23:60.47:0,60,608	1/1:20,0:19:26:272,26,0	0/0:10,0:10:27.07:0,27,305	0/0:12,0:12:5.93:0,6,72	0/0:12,0:10:2.03:0,2,32	0/1:13,0:13:8.36:88,0,8	1/1:18,0:17:14.91:130,15,0	0/1:14,0:13:0:0,0,0	0/1:8,0:7:8.04:8,0,70	0/0:25,0:22:26.61:0,27,343	0/1:9,0:9:36.40:36,0,89	0/1:15,0:15:31.97:235,0,32	1/1:27,0:27:15.47:191,15,0	0/1:22,10:27:0.15:0,0,0	0/0:13,0:12:0:0,0,0	1/1:13,0:13:3.01:40,3,0	0/1:22,0:19:29.08:71,0,29	0/0:14,0:13:5.81:0,6,31	0/0:19,0:19:53.53:0,54,591	0/0:12,0:12:21.06:0,21,253	0/0:11,0:10:21.03:0,21,222
chr10	15809425	.	TTCTCTCTC	T	1246.10	PASS	AB=0.967;AC=27;AF=0.540;AN=50;BaseQRankSum=4.556;DP=522;FS=2.189;HRun=0;HaplotypeScore=138.0927;InbreedingCoeff=0.0140;MQ=69.19;MQ0=12;MQRankSum=-4.370;QD=3.64;ReadPosRankSum=-3.109;VQSLOD=1.7950;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:31,0:29:17.08:96,0,17	0/0:11,0:11:2.92:0,3,17	./.	./.	0/1:14,0:14:12.98:20,0,13	0/1:24,0:23:9.38:43,0,9	1/1:11,4:15:6.02:129,6,0	1/1:35,0:35:0.13:16,0,0	0/1:16,3:20:51.37:75,0,51	0/0:18,0:18:5.82:0,6,192	./.	1/1:17,0:17:9.03:138,9,0	1/1:16,1:22:0.31:123,0,0	0/0:16,0:21:17.94:0,18,207	0/1:21,0:21:1.53:158,0,2	0/1:17,0:17:64.74:85,0,65	1/1:10,3:12:3.01:74,3,0	1/1:10,0:10:3.94:74,4,0	0/0:20,0:19:2.97:0,3,20	0/0:20,0:19:2.87:0,3,25	0/0:20,0:18:5.71:0,6,46	0/1:19,0:19:11.54:12,0,73	0/1:17,0:20:9.95:10,0,17	0/1:17,0:16:6.99:7,0,17	1/1:12,0:12:11.02:175,11,0	1/1:14,0:14:5.20:29,5,0	1/1:17,4:20:5.98:126,6,0	0/0:7,0:5:0.89:0,1,2
chr10	15809782	.	TCCAGCAGACATG	T	26105.16	PASS	AB=0.882;AC=53;AF=0.981;AN=54;BaseQRankSum=-2.382;DP=473;FS=0.000;HRun=0;HaplotypeScore=198.9142;InbreedingCoeff=-0.0242;MQ=70.65;MQ0=0;MQRankSum=-2.363;QD=55.42;ReadPosRankSum=1.663;VQSLOD=4.5776;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:29:39.13:1304,39,0	1/1:5,3:8:9.03:323,9,0	1/1:10,1:12:12.04:285,12,0	0/1:13,2:15:6.49:211,0,6	1/1:8,12:20:20.46:701,20,0	1/1:5,8:13:21.07:754,21,0	1/1:7,17:24:30.10:1077,30,0	1/1:5,9:14:27.09:878,27,0	1/1:2,16:18:45.15:1616,45,0	1/1:5,12:16:30.09:873,30,0	1/1:2,8:10:12.04:431,12,0	1/1:18,0:18:45.15:1615,45,0	1/1:4,22:26:66.23:2370,66,0	1/1:8,14:23:33.11:1185,33,0	1/1:19,0:19:45.14:1451,45,0	1/1:19,0:19:45.15:1546,45,0	1/1:6,19:25:36.12:1292,36,0	1/1:22,0:22:42.14:1507,42,0	1/1:8,10:18:30.07:930,30,0	1/1:4,9:13:18.06:615,18,0	1/1:16,16:32:15.30:539,15,0	1/1:15,0:15:24.08:832,24,0	1/1:2,7:9:14.84:539,15,0	1/1:6,8:14:18.06:646,18,0	1/1:6,0:6:9.03:323,9,0	1/1:7,14:21:36.12:1293,36,0	1/1:1,10:11:27.09:969,27,0	./.
chr10	15809789	.	GACAT	G	6444.82	PASS	AB=0.972;AC=34;AF=0.607;AN=56;BaseQRankSum=11.889;DP=433;FS=2.947;HRun=0;HaplotypeScore=196.4386;InbreedingCoeff=-0.5196;MQ=70.05;MQ0=0;MQRankSum=-8.684;QD=14.95;ReadPosRankSum=10.717;VQSLOD=3.2795;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:9,18:27:12.13:468,12,0	0/1:4,0:4:48.72:66,0,49	0/1:9,0:10:40.47:40,0,147	0/1:15,0:15:14.80:15,0,217	0/1:16,0:17:2.84:131,0,3	0/1:12,0:12:99:151,0,121	0/1:23,0:23:89.39:223,0,89	0/1:12,0:12:99:124,0,205	0/1:18,0:18:46.52:337,0,47	0/1:15,0:14:99:140,0,155	0/1:10,0:10:9.99:88,0,10	1/1:1,16:17:48.11:602,48,0	1/1:25,0:25:23.02:521,23,0	0/1:19,0:19:99:243,0,109	1/1:4,13:17:2.35:437,2,0	1/1:4,14:18:35.28:558,35,0	0/1:23,0:23:85.40:268,0,85	0/1:6,14:20:22.88:564,0,23	0/1:18,0:18:99:156,0,292	0/1:12,0:12:76.12:110,0,76	0/1:28,0:28:99:106,0,131	1/1:2,12:14:20.62:271,21,0	0/1:9,0:9:31.96:112,0,32	0/1:13,0:13:99:131,0,99	1/1:2,4:6:9.03:118,9,0	0/1:18,0:18:99:262,0,168	0/1:11,0:11:43.53:203,0,44	0/0:2,0:2:6.02:0,6,116
chr10	15809794	.	GCCAGCAGA	G	12447.80	PASS	AB=0.919;AC=33;AF=0.611;AN=54;BaseQRankSum=9.982;DP=418;FS=0.502;HRun=0;HaplotypeScore=203.7711;InbreedingCoeff=-0.6615;MQ=65.65;MQ0=0;MQRankSum=-2.848;QD=29.78;ReadPosRankSum=10.336;VQSLOD=2.8117;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,18:18:3.12:697,3,0	0/1:4,0:4:21.77:143,0,22	0/1:8,0:8:23.94:114,0,24	0/1:13,0:13:60.57:61,0,440	0/1:17,0:18:39.15:293,0,39	0/1:10,0:10:31.84:338,0,32	0/1:18,0:18:28.76:485,0,29	0/1:12,0:12:99:342,0,150	0/1:21,0:21:99:723,0,131	0/1:19,0:18:99:305,0,454	1/1:9,0:9:12.04:207,12,0	0/1:9,16:25:99:913,0,146	0/1:26,0:26:99:1064,0,111	0/1:20,0:20:99:524,0,202	0/1:6,13:20:99:771,0,128	1/1:4,14:18:10.61:853,11,0	0/1:22,0:22:23.25:582,0,23	0/1:6,14:20:87.85:910,0,88	0/1:13,0:13:99:382,0,152	0/1:10,0:10:34.80:259,0,35	1/1:27,0:27:14.87:259,15,0	1/1:0,12:13:24.08:483,24,0	0/1:8,0:8:43.74:241,0,44	1/1:12,0:12:18.06:311,18,0	0/1:1,4:5:29.82:181,0,30	0/1:17,0:17:98.70:576,0,99	0/1:12,0:12:90.68:433,0,91	./.
chr10	15809931	.	GT	G	7429.57	PASS	AB=0.995;AC=44;AF=0.786;AN=56;BaseQRankSum=-3.729;DP=504;FS=3.808;HRun=1;HaplotypeScore=103.6288;InbreedingCoeff=0.4031;MQ=98.07;MQ0=0;MQRankSum=-5.510;QD=17.44;ReadPosRankSum=-1.556;VQSLOD=4.6657;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:32,1:33:40.92:41,0,179	1/1:10,0:10:3.33:37,3,0	0/0:29,0:28:84.18:0,84,1108	0/0:29,1:30:62.59:0,63,900	1/1:14,0:14:20.62:150,21,0	1/1:14,0:14:24.21:171,24,0	1/1:17,0:17:12.84:65,13,0	1/1:11,0:11:18.44:113,18,0	1/1:0,21:21:60.20:825,60,0	1/1:10,1:11:15.59:157,16,0	1/1:10,0:10:16.68:120,17,0	0/1:18,0:18:2.35:2,0,113	1/1:5,18:23:69.15:884,69,0	1/1:0,17:17:38.82:541,39,0	0/0:19,0:19:22.35:0,22,146	0/1:20,0:20:2.04:2,0,99	1/1:18,0:17:11.10:59,11,0	0/1:18,0:18:38.39:38,0,80	1/1:1,20:21:63.15:794,63,0	1/1:0,18:18:42.05:534,42,0	1/1:0,33:33:84.28:1171,84,0	0/1:23,0:23:23.08:23,0,108	1/1:0,15:15:42.14:584,42,0	1/1:0,23:23:60.20:836,60,0	0/1:14,0:14:51.34:75,0,51	1/1:1,9:10:9.90:69,10,0	1/1:12,0:12:25.37:123,25,0	1/1:2,0:2:2.84:14,3,0
chr10	15810062	.	TG	T	12307.31	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=7.837;DP=626;FS=3.215;HRun=5;HaplotypeScore=162.6991;InbreedingCoeff=0.9995;MQ=89.31;MQ0=0;MQRankSum=-3.927;QD=29.44;ReadPosRankSum=1.849;VQSLOD=2.7144;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:93.31:0,93,1271	1/1:0,11:11:33.09:374,33,0	0/0:24,0:25:65.68:0,66,810	0/0:27,0:27:69.15:0,69,899	1/1:1,19:20:53.85:534,54,0	1/1:1,15:16:39.03:442,39,0	1/1:0,26:26:72.21:816,72,0	1/1:2,25:27:72.19:807,72,0	1/1:0,26:26:66.04:748,66,0	1/1:1,18:19:45.13:510,45,0	1/1:0,21:21:60.17:680,60,0	0/0:28,0:28:72.24:0,72,984	1/1:1,26:27:81.22:910,81,0	1/1:2,19:21:48.14:544,48,0	0/0:22,0:22:66.19:0,66,869	0/0:26,1:27:47.21:0,47,1000	1/1:2,24:26:63.18:715,63,0	0/0:24,0:24:66.13:0,66,829	1/1:3,14:17:42.12:476,42,0	1/1:0,12:12:30.08:340,30,0	1/1:3,35:38:99:1121,99,0	0/0:9,0:9:27.09:0,27,366	1/1:0,14:14:39.11:442,39,0	1/1:1,37:38:99:1191,105,0	0/0:14,0:14:42.14:0,42,571	1/1:6,24:30:69.18:774,69,0	1/1:2,18:20:51.14:578,51,0	1/1:0,9:9:27.08:306,27,0
chr10	15811351	.	A	ATG	10211.26	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-3.271;DP=538;FS=1.957;HRun=0;HaplotypeScore=81.3040;InbreedingCoeff=0.9977;MQ=82.78;MQ0=1;MQRankSum=-6.422;QD=47.72;ReadPosRankSum=-2.202;VQSLOD=5.3806;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:63.19:0,63,906	1/1:1,7:8:18.06:336,18,0	0/0:18,0:18:22.50:0,22,613	0/0:18,0:18:53.18:0,53,732	1/1:4,17:21:54.15:945,54,0	1/1:3,7:9:24.07:417,24,0	1/1:3,16:19:57.18:1021,57,0	1/1:7,28:35:96.27:1673,96,0	0/0:15,0:15:42.14:0,42,618	1/1:5,18:22:60.21:1107,60,0	1/1:0,16:16:42.14:783,42,0	0/0:17,0:17:51.17:0,51,751	0/0:14,0:14:36.10:0,36,509	0/0:18,0:18:39.13:0,39,574	0/0:17,0:17:51.17:0,51,751	0/0:27,0:27:78.26:0,78,1147	1/1:4,11:15:42.13:747,42,0	0/0:28,0:28:84.26:0,84,1210	0/0:20,0:20:38.09:0,38,799	0/0:25,0:25:72.24:0,72,1059	0/0:20,0:20:48.16:0,48,706	0/0:14,0:14:42.14:0,42,618	0/0:16,0:16:36.10:0,36,509	0/0:12,0:12:30.10:0,30,442	0/0:24,0:24:66.22:0,66,970	1/1:2,25:26:69.24:1288,69,0	1/1:7,22:29:81.25:1444,81,0	1/1:1,10:11:24.08:449,24,0
chr10	15811375	.	CA	C	3462.69	PASS	AB=0.870;AC=37;AF=0.661;AN=56;BaseQRankSum=13.100;DP=491;FS=6.365;HRun=11;HaplotypeScore=83.8132;InbreedingCoeff=0.7280;MQ=68.30;MQ0=1;MQRankSum=-7.235;QD=10.31;ReadPosRankSum=-0.822;VQSLOD=2.8112;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:59.12:0,59,624	1/1:2,5:7:14.98:123,15,0	0/0:13,0:13:20.59:0,21,201	0/1:7,0:7:8.48:8,0,45	1/1:4,17:22:14.97:318,15,0	1/1:3,11:15:20.96:172,21,0	1/1:4,18:22:21.94:387,22,0	1/1:10,11:21:14.96:315,15,0	0/0:16,0:16:36.08:0,36,376	1/1:2,16:18:44.92:369,45,0	1/1:7,8:15:8.81:221,9,0	0/0:19,0:19:51.11:0,51,532	1/1:2,0:9:8.14:24,8,0	1/1:2,0:16:16.29:48,16,0	0/0:20,0:20:48.10:0,48,498	0/0:26,0:27:62.99:0,63,654	1/1:4,10:14:26.94:221,27,0	0/1:26,5:31:14.40:14,0,667	1/1:3,0:17:25.33:83,25,0	1/1:7,0:23:31.47:104,31,0	1/1:3,0:15:12.10:35,12,0	0/0:13,1:14:8.45:0,8,289	1/1:3,0:18:22.40:66,22,0	1/1:1,0:10:14.26:42,14,0	0/0:23,0:23:54.14:0,54,575	1/1:6,15:21:44.91:369,45,0	1/1:4,22:28:63.98:504,64,0	0/1:4,2:6:37.25:37,0,52
chr10	15811519	.	T	TTTGGTGTAGAACTG	11833.42	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-1.889;DP=473;FS=6.087;HRun=0;HaplotypeScore=175.6173;InbreedingCoeff=0.9855;MQ=73.01;MQ0=0;MQRankSum=-11.568;QD=124.56;ReadPosRankSum=-0.352;VQSLOD=4.4251;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,99,3687	0/0:8,0:8:24.08:0,24,915	0/0:14,0:14:39.13:0,39,1261	0/0:9,0:9:18.06:0,18,576	0/0:18,0:18:54.17:0,54,2134	0/0:15,0:14:45.15:0,45,1660	0/0:20,0:20:54.15:0,54,1993	0/0:20,0:20:45.15:0,45,1762	0/0:15,0:15:42.14:0,42,1687	0/0:21,0:21:57.20:0,57,2257	0/0:18,0:18:54.19:0,54,2036	0/0:15,0:15:39.13:0,39,1529	1/1:5,1:9:21.07:1045,21,0	1/1:6,2:12:21.07:1069,21,0	0/0:11,0:11:33.11:0,33,1351	0/0:14,0:14:42.14:0,42,1502	0/0:24,0:24:69.24:0,69,2713	0/0:26,0:26:75.24:0,75,2912	1/1:8,4:14:36.09:1613,36,0	1/1:12,11:25:72.20:3770,72,0	1/1:10,3:14:30.10:1837,30,0	0/0:11,0:11:30.10:0,30,1162	1/1:5,8:14:29.63:2007,30,0	1/1:3,1:7:9.03:493,9,0	0/0:26,0:26:69.21:0,69,2636	0/0:21,0:21:54.19:0,54,2112	0/0:23,0:22:60.18:0,60,2278	0/0:12,0:12:30.07:0,30,1082
chr10	15811649	.	CAT	C	2595.81	PASS	AB=0.673;AC=46;AF=0.821;AN=56;BaseQRankSum=4.106;DP=316;FS=0.000;HRun=0;HaplotypeScore=139.2340;InbreedingCoeff=0.4027;MQ=58.26;MQ0=3;MQRankSum=-3.303;QD=9.24;ReadPosRankSum=2.599;VQSLOD=2.8645;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,17:28:14.50:92,15,0	1/1:1,4:4:5.97:50,6,0	0/0:9,0:7:17.81:0,18,317	0/0:21,0:15:26.53:0,27,652	1/1:2,6:8:5.98:60,6,0	1/1:5,9:14:22.90:170,23,0	0/1:6,7:14:11.62:16,0,12	1/1:7,5:11:31.72:261,32,0	1/1:3,12:15:23.28:148,23,0	1/1:0,6:6:15.80:116,16,0	1/1:3,3:6:8.94:98,9,0	1/1:1,9:10:11.37:76,11,0	0/1:2,4:6:2.43:66,0,2	1/1:1,9:10:11.99:109,12,0	1/1:5,1:6:7.67:73,8,0	1/1:3,4:7:11.74:81,12,0	0/1:9,10:19:35.35:109,0,35	1/1:5,11:16:4.09:191,4,0	1/1:5,8:13:6.15:90,6,0	1/1:0,10:10:7.20:79,7,0	0/1:9,3:11:0:0,0,0	1/1:3,3:6:8.83:56,9,0	0/0:2,3:5:3.59:0,4,11	1/1:8,4:12:9.02:109,9,0	1/1:5,9:14:20.40:159,20,0	1/1:4,7:11:24.47:210,24,0	1/1:4,12:16:30.83:285,31,0	1/1:2,2:4:1:38,1,0
chr10	15811653	.	CAT	C	1958.81	PASS	AB=0.633;AC=44;AF=0.786;AN=56;BaseQRankSum=5.704;DP=284;FS=1.557;HRun=0;HaplotypeScore=132.9809;InbreedingCoeff=0.3939;MQ=58.31;MQ0=3;MQRankSum=-4.109;QD=8.23;ReadPosRankSum=5.432;VQSLOD=3.2736;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,17:25:7.86:49,8,0	1/1:1,4:4:5.97:50,6,0	0/0:9,0:7:17.79:0,18,326	0/0:22,0:15:13.15:0,13,623	1/1:1,6:7:3.01:40,3,0	1/1:4,9:13:16.93:119,17,0	0/0:3,7:10:2.99:0,3,23	1/1:6,5:10:28.71:214,29,0	1/1:1,12:13:17.59:102,18,0	1/1:0,6:6:15.80:116,16,0	1/1:3,3:6:8.94:96,9,0	1/1:0,9:9:11.61:75,12,0	0/1:1,4:5:6.13:28,0,6	1/1:1,9:10:11.23:106,11,0	1/1:3,1:4:3.51:28,4,0	1/1:0,4:4:5.74:31,6,0	0/1:6,10:16:53.93:71,0,54	0/1:5,11:16:6.08:153,0,6	1/1:3,8:11:4.75:88,5,0	1/1:0,10:10:7.12:77,7,0	0/1:7,3:9:0:0,0,0	1/1:2,3:5:5.86:35,6,0	0/0:2,3:5:4.12:0,4,18	1/1:7,4:11:6.01:70,6,0	1/1:2,9:11:11.38:60,11,0	1/1:4,7:11:23.50:207,24,0	1/1:3,12:15:26.73:247,27,0	1/1:1,2:3:5.96:45,6,0
chr10	15811666	.	ACG	A	1843.27	PASS	AB=0.952;AC=47;AF=0.870;AN=54;BaseQRankSum=2.975;DP=295;FS=16.035;HRun=0;HaplotypeScore=141.5533;InbreedingCoeff=0.3694;MQ=42.65;MQ0=5;MQRankSum=-2.562;QD=6.98;ReadPosRankSum=3.167;VQSLOD=2.6584;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:18:2.84:14,3,0	1/1:5,1:5:3:26,3,0	0/0:10,0:4:9.21:0,9,84	0/0:17,0:8:11.77:0,12,74	1/1:6,5:11:2.98:24,3,0	1/1:12,2:15:11.11:82,11,0	0/1:11,1:12:0:0,0,0	1/1:8,0:7:17.87:131,18,0	1/1:13,0:13:20.49:120,20,0	1/1:9,3:12:24.23:164,24,0	1/1:4,2:6:5.99:48,6,0	1/1:9,0:9:11.59:63,12,0	1/1:5,0:5:1.41:17,1,0	1/1:7,4:11:3.47:90,3,0	1/1:1,0:1:2.92:17,3,0	1/1:2,0:2:5.82:33,6,0	1/1:15,4:19:20.45:141,20,0	1/1:13,0:13:25.22:163,25,0	0/1:10,0:10:12.55:93,0,13	1/1:11,3:14:8.97:75,9,0	0/1:13,1:12:0:0,0,0	./.	1/1:7,0:7:5.99:50,6,0	1/1:12,1:13:5.99:51,6,0	1/1:10,0:10:11.73:70,12,0	1/1:11,2:13:32.41:234,32,0	1/1:9,8:17:35.57:236,36,0	1/1:2,1:3:3.85:22,4,0
chr10	15811668	.	GCGCACACACACACACACACGCACGCACACACACACA	G	2976.92	PASS	AB=1.000;AC=25;AF=0.481;AN=52;BaseQRankSum=-2.759;DP=284;FS=10.711;HRun=0;HaplotypeScore=256.0741;InbreedingCoeff=0.3595;MQ=42.73;MQ0=5;MQRankSum=-1.185;QD=22.22;ReadPosRankSum=1.403;VQSLOD=1.0745;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:16,1:15:3.01:265,3,0	0/0:7,0:6:6.02:0,6,311	0/0:9,0:4:8.77:0,9,156	0/0:18,0:8:16.42:0,16,255	1/1:11,0:11:2.98:22,3,0	0/1:17,0:17:3.91:4,0,373	0/0:11,0:11:1.25:0,1,3	0/1:9,0:8:38.62:39,0,937	1/1:10,2:12:20.73:625,21,0	0/0:13,0:13:7.17:0,7,1474	1/1:5,0:5:1.27:21,1,0	1/1:5,3:8:11.97:822,12,0	0/1:4,0:4:12.85:13,0,107	0/0:11,0:11:15.05:0,15,498	1/1:1,0:1:2.92:17,3,0	1/1:1,1:2:5.95:282,6,0	0/0:15,0:15:4.96:0,5,981	1/1:9,2:10:26.81:668,27,0	0/0:9,0:9:1.81:0,2,832	0/0:14,0:14:8.97:0,9,262	./.	./.	0/0:7,0:7:6.02:0,6,98	0/1:12,0:12:18.07:18,0,96	1/1:8,1:9:11.84:322,12,0	0/1:13,0:13:0.71:1,0,1543	0/0:17,0:17:4.61:0,5,2438	1/1:3,0:3:3.85:22,4,0
chr10	15811672	.	A	ACG	33.11	PASS	AB=1.000;AC=7;AF=0.130;AN=54;BaseQRankSum=0.348;DP=313;FS=2.824;HRun=0;HaplotypeScore=154.0360;InbreedingCoeff=0.0817;MQ=35.86;MQ0=8;MQRankSum=0.053;QD=0.38;ReadPosRankSum=-0.508;VQSLOD=2.7416;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:16:2.84:0,3,14	0/0:9,0:8:5.97:0,6,46	0/0:13,0:4:8.69:0,9,83	0/0:21,0:8:11.98:0,12,111	0/0:13,0:13:2.99:0,3,24	0/0:15,3:18:14.75:0,15,101	1/1:12,1:13:2.86:22,3,0	0/0:10,0:9:9.93:0,10,65	0/0:12,0:12:20.35:0,20,116	0/1:15,0:14:70.77:71,0,76	0/0:6,0:6:5.87:0,6,40	0/0:8,0:8:11.44:0,11,59	0/0:4,0:4:5.87:0,6,36	0/0:12,0:12:12.86:0,13,63	0/0:1,0:1:2.94:0,3,18	0/0:2,0:2:5.78:0,6,32	0/0:18,0:18:2.99:0,3,67	0/0:12,0:11:22.83:0,23,158	0/0:10,0:10:21.77:0,22,128	0/0:15,0:15:7.27:0,7,33	0/1:15,0:13:0:0,0,0	./.	0/0:8,0:8:5.99:0,6,48	0/1:13,0:13:12.63:13,0,30	0/0:9,0:9:11.61:0,12,66	0/1:13,0:13:5.05:5,0,132	0/1:18,0:18:30.54:31,0,120	0/0:2,0:2:0:0,0,0
chr10	15811680	.	ACACACACGCACG	A	4136.60	PASS	AB=1.000;AC=40;AF=0.833;AN=48;BaseQRankSum=2.347;DP=277;FS=6.955;HRun=0;HaplotypeScore=147.6889;InbreedingCoeff=0.3191;MQ=36.83;MQ0=9;MQRankSum=0.988;QD=18.63;ReadPosRankSum=3.305;VQSLOD=1.9440;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:5,0:2:3.01:84,3,0	1/1:9,0:8:4.26:103,4,0	0/0:16,0:4:9.03:0,9,258	0/0:23,0:6:5.14:0,5,74	0/1:14,0:14:0:0,0,0	1/1:19,0:19:9.50:181,10,0	1/1:14,0:14:6:56,6,0	1/1:10,0:9:18.68:176,19,0	1/1:2,0:2:6.02:166,6,0	1/1:18,0:17:26.56:390,27,0	0/1:6,0:6:0:0,0,0	0/1:4,0:4:63.09:238,0,63	1/1:4,0:4:2.96:19,3,0	1/1:10,2:12:12.04:370,12,0	./.	1/1:1,0:1:3.01:79,3,0	1/1:19,0:19:18.53:318,19,0	1/1:4,0:3:6.02:149,6,0	0/1:10,0:10:5.44:191,0,5	1/1:12,2:14:9.03:310,9,0	./.	./.	1/1:7,0:7:0.47:1,0,0	1/1:14,1:15:9.02:205,9,0	1/1:1,0:1:3.01:82,3,0	1/1:16,0:16:30.81:457,31,0	1/1:18,0:18:35.39:562,35,0	./.
chr10	15811686	.	ACGCACG	A	4173.75	PASS	AB=0.876;AC=38;AF=0.792;AN=48;BaseQRankSum=0.469;DP=342;FS=17.165;HRun=0;HaplotypeScore=142.2520;InbreedingCoeff=-0.0269;MQ=38.97;MQ0=11;MQRankSum=-0.262;QD=13.60;ReadPosRankSum=2.412;VQSLOD=2.1372;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:16,0:13:35.85:36,0,42	1/1:3,2:8:4.26:72,4,0	0/1:18,0:4:23.25:23,0,149	0/1:25,0:7:14.09:14,0,33	0/1:3,14:17:0.01:0,0,0	1/1:17,2:20:18.06:293,18,0	1/1:15,2:17:21.07:328,21,0	1/1:3,8:9:24.05:343,24,0	1/1:6,0:6:6.02:82,6,0	1/1:5,11:15:30.04:429,30,0	0/1:0,7:7:0:0,0,0	0/1:13,0:13:46.23:112,0,46	1/1:4,0:4:2.96:19,3,0	1/1:12,0:13:11.99:198,12,0	./.	1/1:2,0:2:3.01:37,3,0	1/1:14,4:19:22.70:334,23,0	0/1:11,0:10:43.90:44,0,157	1/1:10,0:10:19.74:225,20,0	1/1:11,0:16:9.03:182,9,0	./.	0/0:3,0:3:0:0,0,0	./.	1/1:14,0:15:9.03:159,9,0	0/1:8,0:8:31.11:31,0,91	1/1:4,11:15:38.49:578,38,0	1/1:11,7:18:42.09:635,42,0	./.
chr10	15811690	.	ACG	A	1519.90	PASS	AB=0.993;AC=36;AF=0.720;AN=50;BaseQRankSum=1.118;DP=352;FS=10.953;HRun=0;HaplotypeScore=142.3835;InbreedingCoeff=0.3066;MQ=36.70;MQ0=10;MQRankSum=-0.041;QD=5.26;ReadPosRankSum=1.773;VQSLOD=2.7514;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:17,0:14:6.83:7,0,20	1/1:8,0:7:2.95:23,3,0	0/1:21,1:6:14.51:15,0,136	0/0:24,0:7:4.80:0,5,33	0/1:17,0:17:0.01:0,0,0	1/1:19,0:19:17.79:130,18,0	1/1:16,0:16:20.80:161,21,0	1/1:11,0:9:23.84:176,24,0	1/1:6,0:6:5.64:27,6,0	1/1:16,0:15:25.91:196,26,0	./.	0/1:15,0:15:8.51:29,0,9	1/1:5,0:5:3:25,3,0	1/1:12,1:13:2.86:48,3,0	0/0:8,0:8:3:0,3,25	1/1:4,0:4:2.68:11,3,0	1/1:18,0:18:17.03:114,17,0	0/0:11,0:10:5.08:0,5,79	1/1:12,0:12:2:91,2,0	1/1:16,0:16:8.85:56,9,0	0/1:18,0:15:0:0,0,0	0/0:4,0:4:3:0,3,25	./.	1/1:14,1:15:8.92:69,9,0	0/1:8,0:8:3.90:4,0,41	1/1:15,0:15:32.36:252,32,0	1/1:18,0:18:36.35:225,36,0	./.
chr10	15812901	.	CT	C	3748.36	PASS	AB=0.921;AC=20;AF=0.357;AN=56;BaseQRankSum=14.969;DP=564;FS=1.593;HRun=10;HaplotypeScore=74.5332;InbreedingCoeff=0.8859;MQ=67.71;MQ0=4;MQRankSum=0.016;QD=17.85;ReadPosRankSum=-0.065;VQSLOD=4.1947;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,120,1313	0/0:8,0:7:12.03:0,12,133	0/0:14,0:13:27.05:0,27,283	0/1:15,1:12:5.72:6,0,118	0/0:23,2:26:19.92:0,20,659	0/0:24,0:24:57.14:0,57,621	0/0:17,1:18:19.08:0,19,439	1/1:4,20:24:56.99:495,57,0	0/0:10,0:10:24.06:0,24,265	0/0:29,0:29:74.98:0,75,796	0/0:16,1:17:19.07:0,19,438	0/1:16,2:18:0.97:1,0,445	1/1:1,21:22:59.99:521,60,0	1/1:2,17:20:53.02:449,53,0	0/0:13,0:13:36.08:0,36,389	0/0:13,0:12:30.08:0,30,331	0/0:25,0:25:63.17:0,63,691	0/0:23,0:22:31.24:0,31,391	1/1:2,13:16:32.03:266,32,0	1/1:1,14:15:38.98:339,39,0	1/1:3,19:21:56.99:495,57,0	1/1:1,14:16:44.99:390,45,0	1/1:2,20:23:56.03:475,56,0	1/1:4,14:18:35.99:312,36,0	0/0:22,0:22:56.93:0,57,591	0/0:19,1:20:28.09:0,28,531	0/0:29,0:31:83.86:0,84,873	0/0:14,0:14:33.09:0,33,365
chr10	15814250	.	GT	G	2078.12	PASS	AB=0.902;AC=22;AF=0.393;AN=56;BaseQRankSum=-4.000;DP=435;FS=6.015;HRun=12;HaplotypeScore=62.0132;InbreedingCoeff=0.8468;MQ=64.93;MQ0=1;MQRankSum=1.724;QD=11.94;ReadPosRankSum=1.699;VQSLOD=3.3918;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:63.07:0,63,622	1/1:0,7:7:20.92:162,21,0	0/0:11,0:9:12:0,12,109	0/0:6,0:6:2.80:0,3,13	1/1:4,16:21:38.30:297,38,0	1/1:2,11:15:9.88:217,10,0	1/1:3,8:12:25.94:192,26,0	0/0:32,0:31:69.80:0,70,291	0/1:9,1:10:2.15:2,0,162	1/1:3,12:15:35.86:279,36,0	1/1:4,10:14:17.88:139,18,0	0/1:14,2:17:4.55:5,0,302	0/0:19,0:19:48.28:0,48,200	0/0:12,0:12:24.11:0,24,100	0/0:15,0:15:42.07:0,42,420	0/0:15,0:14:36.05:0,36,353	1/1:6,16:22:44.82:348,45,0	0/0:14,1:15:15.84:0,16,342	0/0:14,0:14:34.94:0,35,146	0/0:17,0:17:39.13:0,39,158	0/0:21,0:21:40.18:0,40,166	0/0:9,0:9:18.75:0,19,77	0/0:18,0:18:40.18:0,40,166	0/0:12,0:12:24.11:0,24,100	0/0:20,0:21:56.94:0,57,558	1/1:4,12:16:35.85:279,36,0	1/1:3,16:19:38.84:301,39,0	1/1:2,3:5:8.96:70,9,0
chr10	15814253	.	T	TG	5123.49	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-13.409;DP=432;FS=4.551;HRun=0;HaplotypeScore=54.1033;InbreedingCoeff=0.9930;MQ=64.71;MQ0=1;MQRankSum=-0.584;QD=33.49;ReadPosRankSum=0.585;VQSLOD=4.2743;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:72.10:0,72,918	0/0:7,0:7:20.91:0,21,158	0/0:10,0:7:20.28:0,20,201	0/0:8,0:6:17.88:0,18,142	0/0:22,0:22:51.95:0,52,395	0/0:16,0:16:44.85:0,45,361	0/0:12,0:12:35.85:0,36,272	1/1:1,30:30:90.15:1121,90,0	0/0:10,0:10:27.05:0,27,327	0/0:15,0:15:21.97:0,22,300	0/0:14,0:14:32.82:0,33,248	0/0:17,0:17:43.73:0,44,535	1/1:0,20:20:54.08:713,54,0	1/1:1,10:11:27.08:358,27,0	0/0:14,0:14:42.13:0,42,571	0/0:16,0:15:45.11:0,45,564	0/0:19,0:19:53.78:0,54,408	0/0:13,0:13:39.11:0,39,523	1/1:0,14:14:42.12:537,42,0	1/1:0,16:17:45.05:563,45,0	1/1:0,21:21:45.15:597,45,0	1/1:0,10:10:21.07:279,21,0	1/1:0,18:18:45.14:597,45,0	1/1:0,11:11:27.09:358,27,0	0/0:21,0:21:59.38:0,59,776	0/0:16,0:16:47.85:0,48,373	0/0:20,0:19:47.85:0,48,371	0/0:5,0:5:14.96:0,15,117
chr10	15816271	.	T	TG	9611.72	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-15.216;DP=692;FS=0.295;HRun=2;HaplotypeScore=66.9481;InbreedingCoeff=0.9987;MQ=74.76;MQ0=0;MQRankSum=-1.966;QD=38.45;ReadPosRankSum=-1.362;VQSLOD=4.8258;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:57:99:0,159,1958	0/0:7,0:7:21.07:0,21,260	0/0:13,0:13:30.09:0,30,368	0/0:11,0:11:24.05:0,24,281	0/0:18,0:18:42.12:0,42,508	0/0:23,0:23:66.19:0,66,803	0/0:37,0:37:99:0,111,1376	1/1:0,26:26:78.23:1081,78,0	0/0:21,0:21:63.20:0,63,781	0/0:21,0:21:63.19:0,63,771	0/0:17,0:17:45.12:0,45,544	0/0:26,0:26:78.25:0,78,967	1/1:2,30:32:78.16:1104,78,0	1/1:0,20:20:54.18:778,54,0	0/0:19,0:19:54.17:0,54,670	0/0:23,0:23:69.18:0,69,828	0/0:40,0:40:99:0,120,1472	0/0:28,0:28:81.21:0,81,987	1/1:1,26:27:78.25:1097,78,0	1/1:1,13:14:33.09:456,33,0	1/1:4,63:67:99:2592,181,0	1/1:1,17:18:48.14:690,48,0	1/1:1,10:11:27.09:388,27,0	1/1:1,34:35:99:1426,99,0	0/0:12,0:12:33.10:0,33,409	0/0:31,0:31:90.28:0,90,1105	0/0:22,0:22:66.19:0,66,803	0/0:16,0:16:48.15:0,48,595
chr10	15819490	.	A	AT	3705.29	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=6.089;DP=412;FS=11.872;HRun=0;HaplotypeScore=48.6480;InbreedingCoeff=0.9534;MQ=65.70;MQ0=0;MQRankSum=-9.816;QD=39.00;ReadPosRankSum=-4.702;VQSLOD=0.9408;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:96.30:0,96,1316	0/0:9,0:9:24.08:0,24,335	0/0:8,0:8:24.07:0,24,319	0/0:6,0:5:12.04:0,12,168	0/0:26,0:26:75.25:0,75,1048	0/0:19,0:19:57.17:0,57,765	0/0:8,0:8:24.07:0,24,320	1/1:6,21:24:66.17:919,66,0	0/0:9,0:9:24.08:0,24,335	0/0:16,0:16:48.16:0,48,657	0/0:21,0:21:63.20:0,63,864	0/0:11,0:11:33.11:0,33,461	1/1:2,7:10:27.07:372,27,0	1/1:0,12:12:36.12:547,36,0	0/0:9,0:9:27.09:0,27,377	0/0:16,0:16:48.16:0,48,671	0/0:24,0:24:72.24:0,72,1005	0/0:13,0:13:39.07:0,39,505	1/1:1,7:8:24.03:332,24,0	1/1:2,16:18:54.02:743,54,0	1/1:1,3:4:8.94:108,9,0	1/1:0,1:1:3.01:46,3,0	1/1:0,9:9:27.09:411,27,0	1/1:0,6:6:15.05:228,15,0	0/0:34,0:34:99:0,99,1365	0/0:17,0:17:51.15:0,51,694	0/0:22,0:22:66.22:0,66,922	0/0:17,0:17:51.12:0,51,675
chr10	15819507	.	TG	T	3177.82	PASS	AC=16;AF=0.296;AN=54;BaseQRankSum=13.067;DP=427;FS=7.632;HRun=1;HaplotypeScore=54.6549;InbreedingCoeff=0.9589;MQ=70.07;MQ0=0;MQRankSum=-8.034;QD=33.10;ReadPosRankSum=-3.892;VQSLOD=1.5742;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:96.31:0,96,1511	0/0:10,0:10:30.10:0,30,480	0/0:8,0:8:24.08:0,24,384	0/0:8,0:7:21.07:0,21,336	0/0:29,0:29:87.30:0,87,1381	0/0:18,0:18:54.18:0,54,863	0/0:7,0:7:21.07:0,21,336	1/1:0,29:26:75.19:1008,75,0	0/0:9,0:9:24.08:0,24,384	0/0:18,0:18:54.18:0,54,864	0/0:19,0:19:57.19:0,57,911	0/0:12,0:12:36.12:0,36,573	1/1:0,10:10:24.08:335,24,0	1/1:0,11:11:30.10:418,30,0	0/0:8,0:8:24.08:0,24,384	0/0:16,0:16:48.16:0,48,767	0/0:26,0:26:78.24:0,78,1221	0/0:15,0:15:45.11:0,45,691	1/1:0,14:14:42.14:586,42,0	1/1:1,16:17:45.15:627,45,0	1/1:0,4:4:3.01:42,3,0	./.	1/1:1,5:6:12.03:150,12,0	1/1:0,5:5:15.05:209,15,0	0/0:34,0:34:99:0,102,1623	0/0:17,0:17:51.17:0,51,816	0/0:28,0:28:84.29:0,84,1343	0/0:16,0:16:48.16:0,48,761
chr10	15822412	.	C	CG	2855.17	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-5.018;DP=492;FS=20.421;HRun=7;HaplotypeScore=63.1504;InbreedingCoeff=0.9914;MQ=79.61;MQ0=0;MQRankSum=-3.580;QD=24.61;ReadPosRankSum=-1.922;VQSLOD=1.7152;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:97.01:0,97,966	0/0:8,0:8:21.03:0,21,203	0/0:9,0:9:18.45:0,18,125	0/0:17,0:17:41.22:0,41,368	0/0:19,0:19:48.08:0,48,463	0/0:30,0:30:78.12:0,78,753	0/0:24,0:25:65.11:0,65,607	1/1:5,14:19:42.11:486,42,0	0/0:15,0:15:42.07:0,42,406	0/0:20,0:20:48.07:0,48,463	0/0:9,0:9:21.03:0,21,203	0/0:21,0:21:42.01:0,42,396	1/1:1,10:11:27.03:308,27,0	1/1:3,0:15:23.02:121,23,0	0/0:17,0:17:51.08:0,51,492	0/0:18,0:18:51.06:0,51,487	0/0:32,0:32:93.12:0,93,890	0/0:23,0:22:66.11:0,66,637	1/1:4,7:11:24.06:277,24,0	1/1:0,7:7:15.05:181,15,0	1/1:0,24:24:66.20:797,66,0	1/1:2,9:11:27.08:323,27,0	1/1:3,4:7:15.04:176,15,0	1/1:0,11:11:33.10:399,33,0	0/0:25,0:25:60.08:0,60,579	0/0:17,0:17:45.06:0,45,434	0/0:20,0:20:51.06:0,51,485	0/0:11,0:11:30.05:0,30,290
chr10	15823173	.	TG	T	7240.02	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=14.909;DP=540;FS=1.526;HRun=1;HaplotypeScore=61.7784;InbreedingCoeff=0.9589;MQ=76.45;MQ0=0;MQRankSum=-3.437;QD=38.31;ReadPosRankSum=0.631;VQSLOD=5.2916;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:72.23:0,72,1125	0/0:8,0:8:24.07:0,24,348	0/0:15,0:15:36.08:0,36,545	0/0:13,1:14:10.06:0,10,479	0/0:5,0:5:12.04:0,12,189	0/0:9,0:9:27.05:0,27,394	0/0:30,0:30:90.29:0,90,1410	1/1:0,19:19:54.18:755,54,0	0/0:24,0:24:72.23:0,72,1128	0/0:16,0:16:48.16:0,48,749	0/0:8,0:8:24.07:0,24,361	0/0:33,0:33:99:0,99,1533	1/1:0,23:23:60.20:839,60,0	1/1:0,29:29:81.27:1130,81,0	0/0:23,0:23:69.22:0,69,1079	0/0:18,0:18:54.18:0,54,861	0/0:42,0:42:99:0,123,1966	0/0:22,0:22:66.23:0,66,1055	1/1:0,19:19:57.19:791,57,0	1/1:0,10:10:30.10:419,30,0	1/1:1,43:44:99:1545,111,0	1/1:0,9:9:24.08:335,24,0	1/1:0,1:1:3.01:42,3,0	1/1:0,35:35:99:1384,99,0	0/0:9,0:9:27.09:0,27,432	0/0:21,0:21:60.19:0,60,918	0/0:16,0:16:45.15:0,45,719	0/0:13,0:13:39.13:0,39,619
chr10	15823797	.	CGA	C	8639.24	PASS	AB=0.548;AC=49;AF=0.875;AN=56;BaseQRankSum=-1.625;DP=559;FS=8.544;HRun=0;HaplotypeScore=94.9657;InbreedingCoeff=0.5410;MQ=71.83;MQ0=14;MQRankSum=-2.151;QD=17.60;ReadPosRankSum=4.965;VQSLOD=4.2118;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:20:50.51:642,51,0	1/1:3,0:3:6.02:81,6,0	0/0:30,0:19:29.92:0,30,741	0/0:27,0:18:34.35:0,34,619	1/1:2,8:10:2.97:20,3,0	1/1:14,2:15:36.09:484,36,0	1/1:31,0:31:6.02:71,6,0	1/1:3,19:22:54.16:715,54,0	1/1:5,18:23:11.94:137,12,0	1/1:2,10:11:24.08:322,24,0	0/0:11,0:11:1.82:0,2,5	1/1:16,0:16:38.90:486,39,0	1/1:13,6:19:43.97:491,44,0	1/1:14,4:18:19.34:335,19,0	1/1:16,1:17:19.13:347,19,0	1/1:30,1:31:76.50:905,77,0	1/1:1,26:27:21.07:301,21,0	1/1:2,17:18:2.43:38,2,0	1/1:16,2:17:34.85:437,35,0	1/1:3,11:14:5.93:40,6,0	1/1:43,4:47:99:1348,104,0	1/1:4,9:12:0.54:2,1,0	1/1:4,8:11:1.51:5,2,0	0/1:7,33:40:19.02:34,0,19	1/1:10,2:12:29.07:345,29,0	1/1:1,23:24:56.17:752,56,0	1/1:5,17:21:17.94:220,18,0	1/1:5,0:4:6.02:84,6,0
chr10	15823800	.	GAGGT	G	6545.39	PASS	AB=0.963;AC=25;AF=0.446;AN=56;BaseQRankSum=-6.203;DP=604;FS=25.973;HRun=0;HaplotypeScore=121.7692;InbreedingCoeff=-0.3201;MQ=67.57;MQ0=16;MQRankSum=-0.252;QD=14.68;ReadPosRankSum=6.721;VQSLOD=2.7905;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:23,1:23:28.92:545,0,29	0/1:4,0:4:31.27:71,0,31	0/0:29,0:18:29.92:0,30,741	0/0:25,0:16:34.35:0,34,619	1/1:13,0:13:2.97:20,3,0	0/1:18,0:18:44:322,0,44	0/1:5,30:35:48.81:49,0,117	1/1:24,0:23:54.16:715,54,0	0/1:26,0:27:22.31:22,0,74	0/1:15,0:14:7.15:294,0,7	0/0:1,11:12:3.01:0,3,32	0/1:16,0:16:30.71:441,0,31	0/1:19,0:20:71.52:307,0,72	0/1:21,0:21:99:222,0,140	0/1:17,0:17:99:239,0,159	0/1:32,0:32:99:679,0,125	0/0:27,0:27:3.26:0,3,8	0/1:20,0:19:21.18:33,0,21	0/1:19,0:18:75.10:372,0,75	1/1:13,0:13:6.41:41,6,0	0/1:56,0:56:99:1127,0,139	0/0:13,0:12:6:0,6,67	0/0:12,0:11:8.82:0,9,105	0/0:40,0:40:18.49:0,18,196	0/1:17,0:17:99:169,0,100	1/1:25,0:24:11.93:665,12,0	0/1:20,2:21:69.39:138,0,69	0/1:8,0:6:32.49:75,0,32
chr10	15824646	.	C	CTTTT	4357.89	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=3.163;DP=584;FS=3.817;HRun=13;HaplotypeScore=103.8446;InbreedingCoeff=0.9181;MQ=51.62;MQ0=10;MQRankSum=-9.222;QD=24.35;ReadPosRankSum=-9.326;VQSLOD=0.9040;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:36:37.22:0,37,819	0/0:13,0:14:25.15:0,25,292	0/0:9,0:1:3.01:0,3,38	0/0:8,0:1:3.01:0,3,38	0/0:27,0:31:37.58:0,38,626	0/0:25,0:28:52.88:0,53,651	0/0:24,0:24:42.17:0,42,524	1/1:17,16:30:20.07:477,20,0	0/0:16,0:16:36.06:0,36,455	0/0:23,0:25:45.91:0,46,534	0/0:16,0:16:29.79:0,30,336	0/0:17,0:17:16.35:0,16,383	1/1:9,6:14:35.94:576,36,0	1/1:17,1:19:41.96:555,42,0	0/0:16,0:16:29.91:0,30,379	0/0:23,0:25:50.47:0,50,587	0/0:32,0:33:72.15:0,72,874	0/0:20,0:22:27.13:0,27,518	1/1:16,0:13:26.10:366,26,0	1/1:24,4:30:59.90:815,60,0	1/1:2,3:5:5.14:60,5,0	1/1:10,3:17:36.08:571,36,0	1/1:9,13:22:39.04:673,39,0	1/1:8,5:13:12.04:265,12,0	0/0:18,0:23:46.38:0,46,496	0/0:26,0:28:59.93:0,60,708	0/0:19,0:19:39.77:0,40,528	0/0:13,0:13:20.89:0,21,266
chr10	15824730	.	T	TG	6224.65	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-12.905;DP=594;FS=10.292;HRun=4;HaplotypeScore=56.6693;InbreedingCoeff=0.9950;MQ=58.70;MQ0=4;MQRankSum=1.189;QD=34.01;ReadPosRankSum=1.416;VQSLOD=4.9799;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,105,1181	0/0:11,0:11:33.09:0,33,374	0/0:11,0:8:14.94:0,15,163	0/0:11,0:9:18.05:0,18,201	0/0:29,0:29:84.23:0,84,945	0/0:23,0:23:57.15:0,57,638	0/0:25,0:26:68.21:0,68,744	1/1:4,15:16:39.10:501,39,0	0/0:12,0:12:33.09:0,33,374	0/0:34,0:34:96.26:0,96,1080	0/0:20,0:20:57.16:0,57,639	0/0:28,0:28:81.21:0,81,909	1/1:0,15:16:45.15:612,45,0	1/1:2,21:23:63.21:860,63,0	0/0:14,0:14:39.10:0,39,433	0/0:20,0:20:51.14:0,51,578	0/0:31,0:31:81.23:0,81,919	0/0:35,0:35:99:0,102,1133	1/1:2,11:11:27.08:352,27,0	1/1:2,23:25:66.22:901,66,0	1/1:0,15:15:42.14:574,42,0	1/1:2,23:25:63.21:860,63,0	1/1:1,17:18:20.15:663,20,0	1/1:1,28:29:66.22:902,66,0	0/0:13,0:13:33.09:0,33,374	0/0:24,0:24:72.21:0,72,816	0/0:19,0:19:54.15:0,54,612	0/0:10,0:10:30.09:0,30,340
chr10	15826559	.	A	AT	3025.38	PASS	AB=0.950;AC=22;AF=0.393;AN=56;BaseQRankSum=-7.590;DP=375;FS=5.875;HRun=9;HaplotypeScore=39.9486;InbreedingCoeff=0.8467;MQ=71.18;MQ0=0;MQRankSum=-0.389;QD=20.58;ReadPosRankSum=1.709;VQSLOD=3.9131;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:59.92:0,60,513	1/1:0,8:8:21.06:232,21,0	0/0:11,0:11:9.87:0,10,97	0/1:9,0:10:2.47:2,0,41	1/1:2,11:13:36.06:383,36,0	1/1:3,16:19:44.71:474,45,0	1/1:2,6:8:18.05:199,18,0	0/0:28,0:28:59.96:0,60,515	0/0:18,0:18:50.97:0,51,439	1/1:4,9:13:4.05:273,4,0	1/1:2,8:10:24.06:265,24,0	0/0:11,0:11:29.99:0,30,260	0/1:8,1:9:6.11:6,0,181	0/0:18,0:18:44.99:0,45,391	0/0:17,1:18:17.81:0,18,383	0/0:11,0:11:26.97:0,27,230	1/1:6,21:27:14.01:596,14,0	0/0:15,0:15:38.99:0,39,338	0/0:16,0:15:32.66:0,33,329	0/0:10,0:10:23.99:0,24,208	0/0:12,0:12:35.99:0,36,313	0/0:6,0:6:11.99:0,12,104	0/0:10,0:10:26.99:0,27,234	0/0:8,0:8:17.96:0,18,151	0/0:11,0:11:26.95:0,27,228	1/1:1,12:13:36.04:374,36,0	1/1:1,9:10:24.06:265,24,0	1/1:1,6:7:15.04:166,15,0
chr10	15826810	.	TA	T	1879.74	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-1.497;DP=127;FS=0.834;HRun=6;HaplotypeScore=28.1039;InbreedingCoeff=0.6557;MQ=56.19;MQ0=10;MQRankSum=-1.311;QD=22.65;ReadPosRankSum=-0.427;VQSLOD=1.8879;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:27.09:0,27,355	1/1:0,1:1:3.01:33,3,0	0/0:3,0:2:3.89:0,4,31	0/0:2,0:2:3.89:0,4,37	1/1:0,4:4:9.02:97,9,0	1/1:1,3:3:6.02:64,6,0	1/1:2,2:2:6.02:64,6,0	1/1:0,9:9:27.07:290,27,0	0/0:1,0:1:3.01:0,3,39	1/1:1,1:2:6:57,6,0	1/1:0,2:2:6.02:70,6,0	0/0:2,0:2:6.02:0,6,79	1/1:0,3:3:9.02:97,9,0	1/1:0,5:5:12.03:129,12,0	0/0:5,0:5:15.05:0,15,197	0/0:5,0:5:12.04:0,12,158	1/1:3,8:10:24.06:258,24,0	0/0:8,0:7:21.03:0,21,256	1/1:4,1:1:3.01:32,3,0	1/1:0,2:2:6.02:64,6,0	1/1:1,3:3:6.02:64,6,0	1/1:0,1:1:3.01:32,3,0	1/1:2,2:4:6.01:64,6,0	1/1:0,1:1:3.01:32,3,0	0/0:7,0:7:12.04:0,12,158	1/1:0,8:8:21.04:227,21,0	1/1:1,9:10:27.07:291,27,0	1/1:0,3:3:9.02:97,9,0
chr10	15826825	.	T	TA	704.08	PASS	AB=1.000;AC=15;AF=0.326;AN=46;BaseQRankSum=-2.989;DP=120;FS=8.502;HRun=6;HaplotypeScore=37.8295;InbreedingCoeff=0.5153;MQ=69.73;MQ0=1;MQRankSum=-1.019;QD=14.98;ReadPosRankSum=-2.321;VQSLOD=1.6018;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,9:10:23.95:248,24,0	0/0:1,0:1:3.01:0,3,31	0/0:4,0:3:2.03:0,2,6	0/1:9,0:6:12.14:12,0,57	./.	./.	0/0:3,0:2:3.01:0,3,31	0/0:11,0:11:33.04:0,33,322	1/1:0,2:2:3.01:34,3,0	0/0:1,0:1:3.01:0,3,31	0/0:4,0:4:3:0,3,35	1/1:0,2:2:3.01:38,3,0	0/0:2,0:2:6.01:0,6,61	0/0:3,0:3:6.01:0,6,61	1/1:1,4:5:12.04:151,12,0	1/1:1,4:5:3.01:38,3,0	0/0:7,0:7:18.04:0,18,183	1/1:4,3:7:9.03:113,9,0	0/0:2,0:1:3.01:0,3,31	0/0:1,0:1:3.01:0,3,31	0/0:3,0:3:6.01:0,6,61	./.	./.	./.	1/1:0,7:7:20.98:221,21,0	0/0:8,0:8:17.98:0,18,174	0/0:8,0:8:12.02:0,12,120	0/0:5,0:5:12.02:0,12,122
chr10	15826841	.	TAC	T	273.08	PASS	AB=1.000;AC=14;AF=0.318;AN=44;BaseQRankSum=-0.968;DP=126;FS=3.814;HRun=0;HaplotypeScore=55.0548;InbreedingCoeff=0.3610;MQ=66.15;MQ0=4;MQRankSum=0.821;QD=6.07;ReadPosRankSum=-2.236;VQSLOD=2.1183;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:7:11.57:0,12,85	0/0:3,0:3:7.62:0,8,55	0/0:7,0:3:5.34:0,5,29	0/1:15,0:6:2.60:3,0,33	0/1:6,0:6:0:0,0,0	./.	0/0:1,0:1:2.97:0,3,20	1/1:5,2:7:20.94:203,21,0	0/1:3,0:3:18.76:19,0,19	0/0:3,0:3:1.44:0,1,5	0/0:4,0:4:2.22:0,2,7	./.	1/1:1,0:1:3:25,3,0	1/1:3,0:3:5.99:60,6,0	0/0:3,0:3:9:0,9,80	0/1:4,0:4:14.64:15,0,25	0/0:8,0:8:3.28:0,3,50	0/0:10,0:10:17.40:0,17,131	./.	1/1:3,0:3:2.77:43,3,0	1/1:2,1:3:5.94:40,6,0	./.	./.	./.	0/0:9,0:8:12.03:0,12,123	0/0:7,0:7:16.37:0,16,116	0/0:8,0:8:5.89:0,6,42	0/0:6,0:5:5.59:0,6,60
chr10	15826843	.	C	CAT	901.39	PASS	AB=1.000;AC=27;AF=0.711;AN=38;BaseQRankSum=-1.949;DP=125;FS=5.030;HRun=0;HaplotypeScore=55.6132;InbreedingCoeff=0.2384;MQ=69.78;MQ0=4;MQRankSum=-2.023;QD=10.48;ReadPosRankSum=-0.110;VQSLOD=2.6346;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,2:7:3.01:49,3,0	1/1:3,0:3:6.88:63,7,0	0/0:8,0:4:4.39:0,4,35	0/0:15,0:6:2.96:0,3,19	0/1:5,0:6:0:0,0,0	./.	./.	0/0:7,0:7:5.35:0,5,22	1/1:2,1:3:6.02:94,6,0	0/1:1,0:3:4.24:4,0,6	1/1:4,0:4:2.80:13,3,0	./.	./.	1/1:3,0:3:3.01:35,3,0	1/1:2,1:3:6.02:96,6,0	1/1:2,2:4:6.02:95,6,0	1/1:7,0:8:4.54:31,5,0	1/1:3,7:10:12.04:190,12,0	./.	0/1:3,0:3:0.40:1,0,0	./.	./.	./.	./.	1/1:1,8:8:12.04:198,12,0	0/1:6,0:6:6.40:97,0,6	0/1:5,0:8:8.54:12,0,9	1/1:6,0:5:0.68:36,1,0
chr10	15826851	.	T	TAC	972.01	PASS	AB=0.920;AC=33;AF=0.717;AN=46;BaseQRankSum=-0.093;DP=114;FS=6.352;HRun=0;HaplotypeScore=50.5592;InbreedingCoeff=0.2436;MQ=67.13;MQ0=4;MQRankSum=-2.414;QD=10.23;ReadPosRankSum=2.205;VQSLOD=1.8985;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,0:3:3.01:31,3,0	1/1:2,1:3:6.91:105,7,0	0/0:8,0:4:1.95:0,2,24	0/1:13,0:4:0.93:1,0,35	0/1:2,4:6:0:0,0,0	0/0:2,1:3:0:0,0,0	0/0:1,0:1:0:0,0,0	0/0:4,0:4:8.93:0,9,64	0/1:3,0:3:0.11:44,0,0	1/1:3,0:3:8.25:56,8,0	1/1:2,3:5:3.01:33,3,0	./.	1/1:2,0:2:1.80:5,2,0	1/1:1,1:2:3.01:51,3,0	0/1:3,0:3:15.97:37,0,16	1/1:5,0:5:5.87:52,6,0	1/1:4,2:6:11.87:104,12,0	0/1:10,0:10:7.28:92,0,7	1/1:1,0:1:2.22:7,2,0	1/1:3,0:3:4.48:20,4,0	./.	./.	./.	./.	1/1:9,0:8:12.02:120,12,0	1/1:3,2:5:13.28:176,13,0	1/1:7,1:8:11.12:77,11,0	1/1:2,3:4:6.36:73,6,0
chr10	15826871	.	C	CATATAT	397.55	PASS	AB=0.910;AC=15;AF=0.326;AN=46;BaseQRankSum=4.290;DP=105;FS=0.000;HRun=0;HaplotypeScore=52.3598;InbreedingCoeff=0.1933;MQ=57.80;MQ0=4;MQRankSum=-2.946;QD=11.04;ReadPosRankSum=3.042;VQSLOD=1.2413;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:8:9.50:0,10,222	1/1:1,1:2:2.71:48,3,0	0/1:9,0:4:19.04:19,0,129	0/0:12,0:4:9.29:0,9,139	0/0:5,1:6:0:0,0,0	0/0:2,0:2:1.25:0,1,3	0/0:1,0:1:0.47:0,0,1	0/0:2,0:2:6.02:0,6,105	0/0:5,0:5:13.29:0,13,301	1/1:1,1:2:3.01:101,3,0	./.	0/0:3,0:3:6.02:0,6,143	1/1:2,0:2:2.35:56,2,0	1/1:2,0:2:2.52:46,3,0	0/0:1,0:1:3.01:0,3,74	0/0:5,0:5:13.29:0,13,270	0/1:4,0:4:5.19:5,0,13	0/0:7,0:7:12.04:0,12,299	1/1:1,0:1:3.01:78,3,0	0/0:0,0:1:0:0,0,0	./.	./.	./.	./.	0/0:11,0:10:21.07:0,21,491	0/1:4,0:4:19.96:42,0,20	0/1:4,0:6:54.15:88,0,54	0/1:3,1:4:12.20:43,0,12
chr10	15826875	.	C	CACACATATATATAT	2291.41	PASS	AB=0.833;AC=19;AF=0.413;AN=46;BaseQRankSum=3.035;DP=113;FS=13.628;HRun=0;HaplotypeScore=62.3621;InbreedingCoeff=0.5586;MQ=52.34;MQ0=3;MQRankSum=-2.775;QD=63.65;ReadPosRankSum=0.800;VQSLOD=2.0243;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:14.06:0,14,417	1/1:1,1:2:3.90:212,4,0	0/0:8,0:4:3.61:0,4,171	0/0:11,0:4:9.03:0,9,232	0/1:4,2:6:0:0,0,0	0/0:1,0:2:2.99:0,3,24	0/0:0,0:1:0:0,0,0	./.	0/0:5,0:5:14.92:0,15,533	1/1:3,0:3:4.61:281,5,0	./.	0/0:3,0:3:6.02:0,6,223	0/1:2,0:3:1.68:152,0,2	1/1:1,0:2:2.74:162,3,0	0/0:2,0:2:3.01:0,3,130	0/0:5,0:5:14.54:0,15,454	1/1:4,1:5:12.04:594,12,0	0/0:8,0:8:15.05:0,15,566	1/1:2,0:3:8.99:248,9,0	0/0:4,0:4:1.82:0,2,5	./.	./.	0/1:1,0:1:0:0,0,0	./.	0/0:11,0:10:21.07:0,21,802	1/1:2,0:3:9.03:287,9,0	1/1:3,0:4:9.47:289,9,0	1/1:3,1:4:2.13:210,2,0
chr10	15826904	.	GGAGT	G	505.07	PASS	AB=0.934;AC=27;AF=0.563;AN=48;BaseQRankSum=0.835;DP=171;FS=9.399;HRun=0;HaplotypeScore=46.5144;InbreedingCoeff=0.0966;MQ=70.69;MQ0=5;MQRankSum=-3.168;QD=6.16;ReadPosRankSum=-1.321;VQSLOD=-0.2711;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:6:12.01:0,12,154	1/1:1,1:2:5.36:22,5,0	0/0:23,0:10:23.31:0,23,326	0/0:43,0:15:16.80:0,17,406	1/1:6,1:7:2.63:55,3,0	0/1:2,0:2:0.57:1,0,21	1/1:5,0:5:0.12:0,0,0	0/0:3,0:2:5.92:0,6,40	0/1:6,0:6:29.61:30,0,51	0/1:5,0:5:7.04:13,0,7	./.	0/1:3,0:3:12.77:13,0,75	1/1:1,3:4:5.09:84,5,0	0/1:1,1:2:0:0,0,0	0/0:2,0:2:3.01:0,3,55	0/1:7,0:7:12.94:13,0,79	1/1:1,1:2:3.01:30,3,0	0/1:8,1:10:96.93:97,0,119	1/1:3,3:6:9.92:161,10,0	1/1:3,0:3:3.01:39,3,0	0/0:5,0:4:2.98:0,3,21	./.	./.	./.	0/1:8,0:8:12.59:13,0,26	1/1:4,0:4:2.80:21,3,0	0/1:2,1:3:5.80:51,0,6	1/1:2,0:2:0.47:1,0,0
chr10	15826920	.	G	GGA	138.57	PASS	AB=0.955;AC=12;AF=0.250;AN=48;BaseQRankSum=1.844;DP=216;FS=0.000;HRun=0;HaplotypeScore=40.6632;InbreedingCoeff=0.2999;MQ=60.43;MQ0=51;MQRankSum=-0.365;QD=3.15;ReadPosRankSum=-1.630;VQSLOD=1.1122;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:5:3.01:0,3,43	1/1:1,0:1:0.89:2,1,0	0/0:23,0:8:11.75:0,12,115	0/0:41,0:12:18.32:0,18,152	./.	0/0:6,0:3:6.48:0,6,72	0/0:6,0:5:1.71:0,2,4	0/0:14,0:6:5.78:0,6,106	1/1:5,1:4:4.26:56,4,0	0/0:9,0:7:9.02:0,9,109	0/0:4,0:3:0:0,0,0	0/0:2,0:2:3.01:0,3,30	1/1:7,0:5:5.27:51,5,0	0/0:5,0:1:0:0,0,0	0/0:4,0:4:2.60:0,3,25	0/0:5,0:3:5.88:0,6,84	1/1:7,0:1:1.25:3,1,0	0/1:8,1:9:62.97:78,0,63	0/1:9,0:7:10.32:10,0,63	0/0:4,0:4:2.97:0,3,28	0/0:11,1:10:8.97:0,9,90	./.	./.	./.	1/1:3,1:3:3.48:54,3,0	0/0:7,0:5:6.91:0,7,88	0/0:4,0:4:4.17:0,4,20	0/0:4,0:3:8.86:0,9,83
chr10	15827940	.	G	GA	5711.29	PASS	AB=0.719;AC=31;AF=0.554;AN=56;BaseQRankSum=-9.055;DP=629;FS=1.624;HRun=12;HaplotypeScore=68.8855;InbreedingCoeff=0.6377;MQ=72.80;MQ0=5;MQRankSum=-0.752;QD=13.86;ReadPosRankSum=0.678;VQSLOD=5.3349;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:5,21:27:24.70:418,0,25	0/0:5,0:5:11.89:0,12,87	0/1:28,1:15:12.59:13,0,41	0/1:24,0:17:5.45:5,0,64	0/0:27,0:28:70.63:0,71,509	0/0:23,0:22:14.32:0,14,250	0/0:16,1:17:12.54:0,13,251	1/1:14,18:32:13.52:473,14,0	1/1:4,16:20:42.07:409,42,0	0/0:28,1:30:6.75:0,7,326	0/0:19,0:21:33.13:0,33,301	1/1:4,9:13:23.93:233,24,0	1/1:3,19:22:26.14:407,26,0	1/1:4,15:19:11.14:270,11,0	1/1:4,15:20:38.73:350,39,0	0/1:3,14:18:8.60:280,0,9	0/0:14,0:14:29.82:0,30,219	1/1:5,12:17:13.67:323,14,0	1/1:9,12:19:21.04:336,21,0	1/1:8,23:33:53.54:448,54,0	1/1:4,9:13:5.13:212,5,0	1/1:8,23:32:20.30:483,20,0	1/1:9,16:25:10.29:421,10,0	0/1:3,15:18:1.14:308,0,1	1/1:7,20:27:17.15:324,17,0	0/0:28,0:30:66.64:0,67,470	0/0:34,0:34:68.46:0,68,499	0/0:15,0:15:34.82:0,35,247
chr10	15828617	.	ATGTCTGTCTGTC	A	9543.72	PASS	AB=0.584;AC=27;AF=0.482;AN=56;BaseQRankSum=4.374;DP=800;FS=3.359;HRun=0;HaplotypeScore=298.5944;InbreedingCoeff=0.5145;MQ=58.48;MQ0=12;MQRankSum=-11.431;QD=23.11;ReadPosRankSum=2.664;VQSLOD=3.6589;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:4,0:24:5.77:6,0,8	1/1:3,9:12:24.05:788,24,0	0/0:59,0:36:43.07:0,43,1490	0/0:86,0:46:24.36:0,24,718	1/1:6,28:34:42.17:1333,42,0	1/1:1,10:11:15.05:523,15,0	1/1:13,14:28:19.73:802,20,0	0/0:25,0:38:54.18:0,54,1360	1/1:3,0:24:18.98:46,19,0	1/1:7,21:28:47.74:1284,48,0	1/1:7,19:26:12.04:419,12,0	0/1:9,0:28:15.58:16,0,55	0/0:7,0:20:40.20:0,40,1012	0/0:9,0:24:60.19:0,60,1471	0/1:4,1:43:52.24:128,0,52	0/1:8,0:30:26.92:27,0,28	0/1:10,11:21:39.61:358,0,40	0/1:7,1:17:34.51:106,0,35	0/0:11,0:18:42.13:0,42,1047	0/0:10,0:17:30.07:0,30,654	0/0:20,0:46:78.25:0,78,2071	0/0:12,0:30:62.51:0,63,1554	0/0:9,0:23:39.10:0,39,915	0/0:7,0:20:37.37:0,37,1006	0/1:5,0:24:15.35:15,0,21	1/1:10,27:37:75.22:2229,75,0	1/1:6,11:16:26.89:942,27,0	1/1:0,9:9:15.05:523,15,0
chr10	15830362	.	C	CAA	11852.56	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-2.253;DP=619;FS=0.000;HRun=0;HaplotypeScore=78.3678;InbreedingCoeff=0.9993;MQ=87.26;MQ0=1;MQRankSum=-6.153;QD=55.39;ReadPosRankSum=2.726;VQSLOD=5.2852;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:39:99:0,114,1858	1/1:0,7:8:21.07:427,21,0	0/0:27,0:27:74.42:0,74,1075	0/0:17,0:17:48.16:0,48,739	1/1:0,15:15:42.14:853,42,0	1/1:1,24:25:63.22:1280,63,0	1/1:2,20:24:57.20:1158,57,0	0/0:31,0:31:90.31:0,90,1467	0/0:20,0:20:60.20:0,60,977	1/1:0,24:24:72.25:1464,72,0	1/1:1,20:21:63.13:1174,63,0	0/0:15,0:15:45.15:0,45,733	0/0:12,0:12:36.12:0,36,581	0/0:21,0:21:60.20:0,60,978	0/0:25,0:25:75.26:0,75,1217	0/0:19,0:19:51.17:0,51,826	1/1:0,26:27:75.26:1523,75,0	0/0:21,0:21:60.20:0,60,978	0/0:28,0:28:81.27:0,81,1304	0/0:19,0:19:54.18:0,54,877	0/0:21,0:21:54.16:0,54,847	0/0:26,0:26:75.26:0,75,1221	0/0:14,0:14:42.14:0,42,682	0/0:31,0:31:86.92:0,87,1409	0/0:18,0:18:51.17:0,51,831	1/1:1,31:32:96.32:1863,96,0	1/1:1,26:26:75.26:1511,75,0	1/1:0,9:10:30.10:599,30,0
chr10	15830431	.	CTGTG	C	4992.46	PASS	AB=0.648;AC=25;AF=0.463;AN=54;BaseQRankSum=-4.304;DP=715;FS=12.118;HRun=0;HaplotypeScore=174.1245;InbreedingCoeff=0.3773;MQ=60.30;MQ0=17;MQRankSum=0.300;QD=12.51;ReadPosRankSum=-0.301;VQSLOD=3.9051;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:27,6:53:99:268,0,250	1/1:9,8:17:19.03:389,19,0	0/0:43,0:14:3.01:0,3,43	./.	1/1:7,13:24:17.92:411,18,0	1/1:12,10:24:49.35:697,49,0	1/1:19,9:28:24.01:318,24,0	0/0:39,0:39:45.57:0,46,610	0/1:8,1:19:56.70:57,0,75	1/1:19,7:26:27.08:409,27,0	1/1:11,4:16:6:202,6,0	0/0:11,0:22:21.96:0,22,98	0/0:6,0:15:17.61:0,18,233	0/0:20,0:21:4.57:0,5,118	0/1:12,4:34:99:129,0,184	0/1:9,1:19:33.76:34,0,35	1/1:14,17:33:57.10:853,57,0	0/1:13,1:27:5.96:6,0,158	0/0:17,0:18:23.97:0,24,295	0/0:10,0:10:5.82:0,6,81	0/0:30,0:30:23.59:0,24,335	0/0:22,0:22:17.75:0,18,263	0/0:15,0:28:0.17:0,0,0	0/0:12,0:24:2.59:0,3,53	0/1:11,2:22:69.98:70,0,95	1/1:17,13:32:44.79:745,45,0	0/1:8,6:18:1.36:338,0,1	1/1:4,2:5:4.54:65,5,0
chr10	15832119	.	CA	C	1662.16	PASS	AB=0.769;AC=46;AF=0.821;AN=56;BaseQRankSum=-0.252;DP=481;FS=0.000;HRun=17;HaplotypeScore=68.7821;InbreedingCoeff=0.0909;MQ=49.96;MQ0=17;MQRankSum=2.062;QD=3.57;ReadPosRankSum=1.679;VQSLOD=-0.1271;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:16,17:36:16.99:176,17,0	1/1:3,3:6:8.63:48,9,0	0/0:6,1:4:4.06:0,4,13	0/1:7,0:6:8.27:8,0,9	0/1:10,6:16:40.06:60,0,40	1/1:8,5:14:17.89:102,18,0	1/1:11,9:20:20.56:117,21,0	1/1:23,0:35:29.08:92,29,0	1/1:12,3:15:2.07:101,2,0	0/1:11,2:16:22.95:52,0,23	1/1:3,4:6:8.72:50,9,0	1/1:13,3:17:12.08:101,12,0	1/1:5,1:15:10.83:39,11,0	1/1:9,1:16:10.64:39,11,0	1/1:12,0:14:7.50:37,8,0	0/1:7,4:12:5.42:28,0,5	1/1:15,11:25:16.18:89,16,0	1/1:11,4:17:20.58:100,21,0	1/1:7,1:16:4.15:48,4,0	1/1:7,0:19:7.54:22,8,0	1/1:9,1:15:2.84:29,3,0	1/1:5,1:16:22.73:72,23,0	0/1:7,0:10:4.27:8,0,4	1/1:10,1:18:19.77:71,20,0	1/1:8,12:18:16.29:86,16,0	0/1:17,8:27:3.47:136,0,3	1/1:11,9:21:13.10:71,13,0	0/0:8,0:4:0:0,0,0
chr10	15832508	.	CT	C	8282.95	PASS	AB=0.951;AC=53;AF=0.946;AN=56;BaseQRankSum=-1.880;DP=452;FS=10.169;HRun=3;HaplotypeScore=110.5949;InbreedingCoeff=0.5504;MQ=49.79;MQ0=26;MQRankSum=2.109;QD=21.51;ReadPosRankSum=3.334;VQSLOD=3.6147;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,8:9:24.05:283,24,0	1/1:0,4:4:12.04:148,12,0	0/1:55,3:13:19.29:19,0,127	0/0:66,1:20:20.51:0,21,229	1/1:0,13:13:27.08:335,27,0	1/1:1,16:17:43.46:504,43,0	1/1:2,18:20:32.93:373,33,0	1/1:5,17:20:42.13:520,42,0	1/1:2,13:16:32.18:356,32,0	1/1:0,19:18:51.16:632,51,0	1/1:0,8:8:11.72:148,12,0	1/1:0,13:12:21.06:260,21,0	1/1:2,7:9:18.06:223,18,0	1/1:1,8:7:15.04:185,15,0	1/1:0,14:14:32.92:367,33,0	1/1:1,15:16:39.08:454,39,0	1/1:1,5:5:15.05:186,15,0	1/1:0,16:17:47.36:564,47,0	1/1:2,8:8:23.10:266,23,0	1/1:1,4:5:12.04:149,12,0	1/1:0,12:12:18.04:223,18,0	1/1:1,10:10:17.84:206,18,0	1/1:1,8:8:12.04:149,12,0	1/1:2,11:12:11.92:148,12,0	1/1:3,7:9:21.52:249,22,0	1/1:2,20:22:60.19:742,60,0	1/1:1,12:13:33.10:407,33,0	1/1:3,5:7:15.05:186,15,0
chr10	15832558	.	CTCAG	C	4569.34	PASS	AB=1.000;AC=38;AF=0.704;AN=54;BaseQRankSum=3.469;DP=331;FS=48.574;HRun=0;HaplotypeScore=139.5504;InbreedingCoeff=-0.1063;MQ=47.10;MQ0=9;MQRankSum=0.380;QD=15.23;ReadPosRankSum=6.913;VQSLOD=2.5327;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:8,0:8:27.08:79,0,27	0/1:4,0:4:10.94:57,0,11	0/1:5,0:2:5.93:6,0,32	0/1:19,0:4:18.40:18,0,36	./.	1/1:16,0:15:18.55:198,19,0	1/1:13,1:14:26.76:355,27,0	0/1:9,0:8:0.21:119,0,0	1/1:9,3:12:13.33:255,13,0	0/1:15,0:13:1.61:322,0,2	0/0:10,0:10:3.01:0,3,35	1/1:12,1:13:17.41:205,17,0	0/1:12,0:12:11.69:176,0,12	0/0:9,0:8:6.36:0,6,46	1/1:7,0:7:14.54:174,15,0	1/1:15,0:15:24.06:300,24,0	1/1:9,0:9:18.05:193,18,0	1/1:8,0:8:15.05:180,15,0	0/1:8,0:7:42.56:143,0,43	0/1:10,0:10:20.54:82,0,21	0/1:11,0:11:8.56:135,0,9	0/1:12,0:11:18.24:66,0,18	1/1:12,0:11:1.30:31,1,0	0/1:17,0:16:68.86:163,0,69	1/1:15,0:13:9.03:134,9,0	1/1:29,1:29:3.50:797,4,0	1/1:15,1:16:27.23:313,27,0	1/1:3,0:2:6.02:69,6,0
chr10	15832560	.	CAG	C	4814.90	PASS	AB=0.792;AC=48;AF=0.923;AN=52;BaseQRankSum=-1.499;DP=272;FS=0.000;HRun=0;HaplotypeScore=113.8054;InbreedingCoeff=0.1141;MQ=49.20;MQ0=6;MQRankSum=1.139;QD=18.96;ReadPosRankSum=2.597;VQSLOD=4.8880;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,3:8:5.62:87,6,0	1/1:1,2:3:6.02:66,6,0	0/1:5,0:2:5.76:6,0,32	0/1:19,0:4:18.40:18,0,36	./.	1/1:7,4:10:20.80:266,21,0	1/1:7,3:10:27.02:355,27,0	1/1:1,7:7:12.03:134,12,0	1/1:5,5:10:10.42:153,10,0	1/1:3,10:11:33.10:395,33,0	./.	1/1:4,4:8:18.04:191,18,0	1/1:1,7:9:21.05:219,21,0	0/1:3,4:6:0:0,0,0	1/1:5,2:7:14.25:153,14,0	1/1:6,9:15:23.85:253,24,0	1/1:3,6:9:18.05:193,18,0	1/1:7,0:7:15.04:167,15,0	1/1:3,3:5:15.05:192,15,0	1/1:2,6:8:9.03:118,9,0	1/1:8,2:10:11.90:150,12,0	1/1:4,2:6:4.01:71,4,0	0/1:1,7:8:1.60:28,0,2	1/1:14,1:14:7.38:202,7,0	1/1:3,10:11:9.03:134,9,0	1/1:6,18:24:72.19:831,72,0	1/1:4,8:12:30.01:362,30,0	1/1:0,3:2:6.02:69,6,0
chr10	15832739	.	T	TGAGA	2495.52	PASS	AB=0.988;AC=39;AF=0.722;AN=54;BaseQRankSum=-4.664;DP=472;FS=4.928;HRun=0;HaplotypeScore=168.4493;InbreedingCoeff=0.4023;MQ=65.30;MQ0=9;MQRankSum=2.409;QD=6.74;ReadPosRankSum=-2.175;VQSLOD=1.6633;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:17:0.89:2,1,0	1/1:5,0:5:2.99:24,3,0	./.	0/1:30,0:12:0:0,0,0	1/1:19,0:20:5.17:37,5,0	1/1:21,0:19:8.97:157,9,0	1/1:11,0:14:3:28,3,0	1/1:28,0:27:3.01:40,3,0	0/0:11,0:12:3:0,3,28	1/1:20,1:20:23.98:324,24,0	0/1:23,0:22:28.54:29,0,37	0/0:8,0:9:6.01:0,6,56	1/1:19,0:19:17.95:221,18,0	1/1:10,1:11:9.03:187,9,0	0/0:9,0:10:0.47:0,0,1	0/0:12,0:14:6.01:0,6,56	1/1:16,1:18:18.86:278,19,0	0/0:12,0:13:3:0,3,28	1/1:14,0:14:12.04:167,12,0	1/1:18,1:20:11.76:171,12,0	1/1:14,0:13:3.01:43,3,0	1/1:15,1:16:5.99:50,6,0	1/1:18,0:19:17.77:218,18,0	1/1:9,3:12:8.18:209,8,0	0/0:14,0:17:9.90:0,10,85	1/1:17,0:17:12.48:192,12,0	0/1:26,1:27:18.23:223,0,18	1/1:4,0:3:3.01:43,3,0
chr10	15834918	.	G	GTCTA	37085.23	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-8.488;DP=821;FS=3.508;HRun=0;HaplotypeScore=122.9679;InbreedingCoeff=0.9828;MQ=75.99;MQ0=2;MQRankSum=-7.738;QD=48.73;ReadPosRankSum=5.586;VQSLOD=5.7183;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,48:54:99:2571,99,0	1/1:2,8:10:12.04:312,12,0	0/0:24,0:23:37.65:0,38,565	0/0:36,0:32:26:0,26,645	1/1:3,24:28:39.13:1013,39,0	1/1:0,27:30:51.08:1324,51,0	1/1:7,21:32:42.12:1090,42,0	1/1:7,26:37:90.16:1784,90,0	1/1:2,13:17:27.09:701,27,0	1/1:5,28:36:96.19:2037,96,0	1/1:2,28:31:51.18:1323,51,0	1/1:2,25:28:60.21:1549,60,0	1/1:2,21:26:48.16:1239,48,0	1/1:2,23:25:54.19:1395,54,0	1/1:2,31:37:78.27:2024,78,0	1/1:1,30:35:78.27:2026,78,0	1/1:2,21:25:48.16:1246,48,0	1/1:1,22:23:54.19:1402,54,0	1/1:6,15:23:51.15:1109,51,0	1/1:2,32:35:69.24:1792,69,0	1/1:1,32:35:66.23:1690,66,0	1/1:3,26:29:48.11:1247,48,0	1/1:2,24:28:48.02:1246,48,0	1/1:1,18:21:39.13:1013,39,0	1/1:3,17:22:33.11:857,33,0	1/1:0,27:29:87.25:2005,87,0	1/1:1,36:42:90.24:2235,90,0	1/1:4,15:19:33.11:857,33,0
chr10	15838863	.	ACT	A	7498.41	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=9.066;DP=635;FS=0.671;HRun=0;HaplotypeScore=90.7618;InbreedingCoeff=0.9833;MQ=96.47;MQ0=1;MQRankSum=-3.075;QD=40.10;ReadPosRankSum=4.956;VQSLOD=6.2742;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,34:35:93.31:1369,93,0	0/0:8,0:8:21.06:0,21,354	0/0:29,0:29:75.04:0,75,1280	0/0:32,0:32:79.39:0,79,1574	0/0:17,0:17:48.16:0,48,899	0/0:16,0:16:48.15:0,48,859	0/0:25,0:25:72.25:0,72,1348	0/0:31,0:31:90.30:0,90,1650	1/1:0,23:23:66.22:972,66,0	0/0:37,0:37:99:0,102,1911	0/0:18,0:18:54.19:0,54,1009	1/1:1,21:22:7.03:828,7,0	0/0:22,0:22:66.23:0,66,1227	0/0:20,0:20:60.19:0,60,1090	1/1:1,33:34:96.32:1414,96,0	1/1:1,20:21:54.18:795,54,0	0/0:24,0:24:72.25:0,72,1348	1/1:1,27:27:72.24:1060,72,0	0/0:20,0:20:57.19:0,57,1031	0/0:23,0:23:63.20:0,63,1149	0/0:21,0:21:57.20:0,57,1068	0/0:16,0:16:48.16:0,48,899	0/0:20,0:20:60.19:0,60,1085	0/0:17,0:17:51.17:0,51,955	1/1:0,24:24:72.24:1060,72,0	0/0:15,0:15:45.15:0,45,813	0/0:27,0:27:81.26:0,81,1485	0/0:10,0:10:30.10:0,30,562
chr10	15842781	.	CA	C	3197.77	PASS	AB=0.751;AC=31;AF=0.554;AN=56;BaseQRankSum=-6.426;DP=535;FS=16.150;HRun=14;HaplotypeScore=69.4922;InbreedingCoeff=0.6139;MQ=59.08;MQ0=10;MQRankSum=0.582;QD=8.98;ReadPosRankSum=4.499;VQSLOD=1.1392;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,29:41:28.32:436,28,0	0/1:4,1:10:6.01:6,0,66	0/0:5,0:2:5.45:0,5,27	0/1:4,0:4:4.37:15,0,4	0/0:6,1:20:37.71:0,38,206	0/0:9,0:21:31.53:0,32,174	0/0:9,0:22:55.08:0,55,343	1/1:5,10:15:12.40:178,12,0	0/1:5,17:25:24.73:190,0,25	0/0:9,0:19:38.36:0,38,243	0/0:9,0:18:31.75:0,32,183	1/1:8,12:20:6.16:182,6,0	1/1:6,8:13:17.76:123,18,0	1/1:8,9:18:24.85:156,25,0	1/1:7,18:25:47.51:329,48,0	1/1:4,12:16:23.75:164,24,0	0/0:5,0:21:43.26:0,43,269	0/1:9,7:18:75.48:97,0,75	1/1:8,12:21:28.34:185,28,0	1/1:5,9:12:13:151,13,0	1/1:2,15:19:39.76:258,40,0	1/1:7,16:23:35.53:246,36,0	1/1:8,17:23:38.59:267,39,0	0/1:7,16:24:30.93:238,0,31	1/1:8,13:21:6.91:184,7,0	0/0:6,0:20:50.67:0,51,317	0/0:10,0:20:29.04:0,29,180	0/0:7,0:9:8.68:0,9,57
chr10	15847668	.	CA	C	4771.03	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=0.711;DP=752;FS=0.000;HRun=11;HaplotypeScore=91.9046;InbreedingCoeff=0.9948;MQ=76.68;MQ0=0;MQRankSum=-2.415;QD=19.47;ReadPosRankSum=1.252;VQSLOD=5.2924;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:51:99:0,112,626	1/1:3,10:13:26.87:222,27,0	0/0:19,0:18:22.01:0,22,374	0/0:18,0:18:12.52:0,13,228	1/1:2,24:26:65.73:541,66,0	1/1:4,12:16:35.93:296,36,0	1/1:5,24:29:62.91:517,63,0	0/0:32,2:35:53.37:0,53,750	0/0:6,0:21:40.10:0,40,225	1/1:5,21:27:64.93:518,65,0	1/1:5,28:33:71.88:591,72,0	0/0:2,0:22:34.09:0,34,171	0/0:38,1:40:74.52:0,75,958	0/0:23,0:23:56.91:0,57,576	0/0:3,0:30:60.05:0,60,315	0/0:2,0:29:62.73:0,63,332	1/1:3,27:30:48.92:608,49,0	0/0:2,0:23:45.77:0,46,238	0/0:19,1:20:23.29:0,23,427	0/0:28,0:28:69.16:0,69,724	0/0:22,1:23:64.04:0,64,673	0/0:24,0:24:66.10:0,66,679	0/0:37,0:37:93.23:0,93,985	0/0:37,1:38:71.55:0,72,948	0/0:3,0:26:57.35:0,57,317	1/1:6,27:33:74.88:616,75,0	1/1:2,24:26:68.90:567,69,0	1/1:0,12:12:35.96:296,36,0
chr10	15849156	.	A	AT	9438.34	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-13.921;DP=599;FS=2.401;HRun=9;HaplotypeScore=56.5552;InbreedingCoeff=0.9835;MQ=73.33;MQ0=0;MQRankSum=-3.086;QD=25.10;ReadPosRankSum=2.853;VQSLOD=5.6773;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,22:25:63.17:697,63,0	1/1:1,11:13:32.92:346,33,0	0/0:19,0:19:28.26:0,28,248	0/0:9,0:9:23.85:0,24,191	1/1:4,29:33:81.18:881,81,0	1/1:3,13:16:13.05:372,13,0	1/1:1,11:12:30.08:332,30,0	0/0:34,0:34:53.36:0,53,668	1/1:2,18:20:42.11:464,42,0	1/1:7,29:36:67.18:960,67,0	1/1:3,13:16:39.06:418,39,0	1/1:3,12:16:36.08:389,36,0	0/0:21,0:21:50.96:0,51,441	0/0:20,0:21:53.02:0,53,449	1/1:3,18:21:25.08:503,25,0	1/1:6,16:22:16.06:406,16,0	1/1:5,24:30:16.93:626,17,0	1/1:3,29:32:69.19:763,69,0	0/0:15,0:16:34.92:0,35,282	0/0:23,0:24:59.02:0,59,501	0/0:20,0:20:50.95:0,51,435	0/0:18,0:18:44.97:0,45,387	0/0:20,0:21:59.02:0,59,501	0/0:17,1:20:18.84:0,19,362	1/1:3,12:15:10.04:339,10,0	1/1:1,32:33:84.19:909,84,0	1/1:2,27:29:54.61:836,55,0	1/1:0,7:7:18.05:199,18,0
chr10	15852257	.	C	CCAAA	3088.48	PASS	AB=0.815;AC=35;AF=0.625;AN=56;BaseQRankSum=7.078;DP=307;FS=11.878;HRun=0;HaplotypeScore=66.9349;InbreedingCoeff=-0.4150;MQ=55.06;MQ0=19;MQRankSum=-2.922;QD=10.26;ReadPosRankSum=4.981;VQSLOD=0.8044;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:17,0:17:32.04:318,0,32	1/1:0,0:3:8.82:54,9,0	0/1:8,0:7:1.82:2,0,46	0/0:5,0:4:8.82:0,9,104	0/1:6,0:15:83.08:143,0,83	0/1:1,0:8:8.69:104,0,9	0/1:3,0:12:44.98:91,0,45	0/1:22,0:21:85.85:284,0,86	1/1:8,0:9:21.05:218,21,0	1/1:4,0:8:10.58:106,11,0	0/1:1,2:7:1.98:147,0,2	0/1:7,0:10:78.42:83,0,78	0/1:7,0:7:33.45:43,0,33	1/1:8,0:8:8.95:66,9,0	0/1:11,0:9:34.43:104,0,34	1/1:8,0:7:12.03:121,12,0	0/1:10,0:16:67.84:68,0,79	0/1:13,0:13:28.28:158,0,28	0/1:10,0:8:53.88:54,0,78	1/1:3,0:2:5.98:49,6,0	0/1:8,0:8:33.44:40,0,33	1/1:8,0:8:14.96:134,15,0	0/1:10,0:11:2.54:182,0,3	1/1:15,0:14:6.47:227,6,0	0/1:11,0:12:82.12:111,0,82	0/1:4,0:13:52.02:149,0,52	0/1:5,0:15:72.86:73,0,92	0/1:10,0:9:59.79:119,0,60
chr10	15852258	.	A	AAAAAAG	6896.84	PASS	AB=1.000;AC=43;AF=0.768;AN=56;BaseQRankSum=-2.617;DP=315;FS=1.672;HRun=0;HaplotypeScore=65.1731;InbreedingCoeff=0.2104;MQ=57.13;MQ0=18;MQRankSum=-3.446;QD=24.28;ReadPosRankSum=4.341;VQSLOD=4.4322;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,11:18:29.19:1027,29,0	1/1:3,0:3:2.47:7,2,0	0/0:10,0:8:17.49:0,17,153	0/0:6,0:4:8.39:0,8,121	0/1:15,0:15:29.24:29,0,63	1/1:8,0:8:9.98:40,10,0	0/1:13,0:12:16.66:17,0,60	1/1:21,0:20:53.83:840,54,0	1/1:2,7:10:21.07:652,21,0	0/1:9,0:8:4.78:5,0,23	0/1:7,0:7:28.15:35,0,28	1/1:9,1:10:11.92:278,12,0	1/1:7,0:7:6:120,6,0	1/1:8,0:8:9.03:182,9,0	1/1:5,6:10:12.02:383,12,0	1/1:0,8:8:12.04:383,12,0	0/1:20,0:17:18.27:18,0,35	1/1:6,8:14:27.01:678,27,0	1/1:10,0:8:17.96:247,18,0	1/1:3,0:2:6.02:121,6,0	1/1:10,0:10:8.83:135,9,0	1/1:8,0:8:15.05:300,15,0	1/1:12,0:12:21.05:404,21,0	1/1:16,0:14:30.10:603,30,0	1/1:5,7:12:12:357,12,0	0/1:15,0:13:18.57:19,0,90	0/0:15,0:15:3.67:0,4,86	0/1:13,0:9:18.53:19,0,100
chr10	15852259	.	A	AAAAAG	7579.19	PASS	AB=0.951;AC=43;AF=0.768;AN=56;BaseQRankSum=-3.035;DP=326;FS=0.000;HRun=0;HaplotypeScore=62.7179;InbreedingCoeff=0.0478;MQ=56.76;MQ0=17;MQRankSum=-3.998;QD=24.45;ReadPosRankSum=4.260;VQSLOD=4.3911;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:18:14.12:623,14,0	1/1:3,0:3:6.81:23,7,0	0/0:10,0:8:23.71:0,24,211	0/0:6,0:4:9.03:0,9,145	0/1:15,0:15:49.72:50,0,50	1/1:8,0:8:13.27:63,13,0	0/1:13,0:12:37.46:37,0,41	1/1:7,17:25:67.90:1384,68,0	1/1:10,0:10:21.07:457,21,0	0/1:10,0:9:17.42:17,0,32	0/1:7,0:7:26.14:45,0,26	1/1:8,0:8:11.93:202,12,0	1/1:2,5:7:6:166,6,0	1/1:1,7:10:12.04:334,12,0	1/1:12,0:10:12.02:263,12,0	1/1:9,0:8:12.04:263,12,0	0/1:20,0:17:35.65:36,0,51	1/1:12,1:13:26.91:520,27,0	1/1:10,5:14:36.01:608,36,0	1/1:0,2:3:5.99:167,6,0	0/1:2,7:9:8.63:169,0,9	1/1:1,7:8:15.05:416,15,0	1/1:3,8:13:21.03:565,21,0	1/1:4,13:15:30.10:830,30,0	1/1:11,0:11:11.97:266,12,0	0/1:15,0:13:23.19:23,0,79	0/1:15,0:15:12.94:13,0,73	0/1:13,0:9:37.40:37,0,91
chr10	15852360	.	TATTATTATC	T	1927.64	PASS	AB=1.000;AC=29;AF=0.558;AN=52;BaseQRankSum=-3.654;DP=216;FS=6.543;HRun=0;HaplotypeScore=60.5692;InbreedingCoeff=0.5915;MQ=58.76;MQ0=1;MQRankSum=-2.088;QD=17.21;ReadPosRankSum=1.291;VQSLOD=1.0554;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:7,1:8:17.79:124,18,0	0/0:1,0:1:3:0,3,25	0/0:8,0:6:2.07:0,2,32	0/0:3,0:3:5.98:0,6,48	0/0:12,0:12:20.98:0,21,472	0/0:6,0:6:15.02:0,15,340	0/0:4,0:4:11.90:0,12,88	1/1:22,0:22:41.88:349,42,0	1/1:0,2:2:3.01:88,3,0	0/0:3,0:3:6.02:0,6,142	0/0:11,0:11:23.97:0,24,200	./.	1/1:2,1:3:6.01:113,6,0	1/1:4,0:4:3.01:75,3,0	1/1:2,0:2:6:53,6,0	1/1:4,0:4:3:25,3,0	0/0:25,0:25:62.88:0,63,1462	1/1:16,2:17:47.81:629,48,0	1/1:5,12:17:32.92:390,33,0	1/1:3,0:3:5.99:50,6,0	1/1:3,0:3:5.96:45,6,0	1/1:2,0:2:2.97:20,3,0	1/1:2,0:2:3:25,3,0	./.	1/1:2,4:6:3.01:88,3,0	0/0:9,0:9:17.98:0,18,158	0/1:16,0:16:33.87:34,0,247	0/0:20,0:20:5.21:0,5,495
chr10	15852363	.	T	TATTATC	1655.13	PASS	AB=0.556;AC=19;AF=0.380;AN=50;BaseQRankSum=-7.351;DP=208;FS=11.326;HRun=0;HaplotypeScore=47.0991;InbreedingCoeff=0.6008;MQ=54.33;MQ0=2;MQRankSum=2.102;QD=15.61;ReadPosRankSum=-0.660;VQSLOD=0.9752;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:8:14.87:0,15,107	1/1:1,0:1:3:25,3,0	0/0:7,0:5:5.94:0,6,44	0/0:2,0:2:5.97:0,6,44	1/1:10,1:11:12:132,12,0	1/1:5,1:6:11.90:164,12,0	1/1:4,0:4:8.96:70,9,0	0/0:21,0:20:23.85:0,24,188	0/0:2,0:2:3.01:0,3,42	1/1:3,0:3:6.01:129,6,0	1/1:11,0:11:14.98:124,15,0	./.	0/0:4,0:4:5.99:0,6,63	0/0:3,0:3:3:0,3,25	0/0:2,0:2:6:0,6,53	0/0:1,0:1:3:0,3,25	1/1:24,1:25:36.75:495,37,0	0/0:19,0:18:47.68:0,48,411	0/0:15,0:15:23.95:0,24,229	./.	0/0:3,0:3:5.96:0,6,45	0/0:2,0:2:2.97:0,3,20	0/0:1,0:1:0:0,0,0	./.	0/0:6,0:6:3.01:0,3,42	1/1:7,0:7:14.98:130,15,0	0/1:3,12:15:15.99:194,0,16	1/1:7,14:23:12.04:363,12,0
chr10	15852372	.	T	TATC	1085.73	PASS	AB=0.887;AC=17;AF=0.315;AN=54;BaseQRankSum=-4.344;DP=180;FS=14.793;HRun=0;HaplotypeScore=37.1323;InbreedingCoeff=0.3957;MQ=49.08;MQ0=2;MQRankSum=1.278;QD=12.06;ReadPosRankSum=2.147;VQSLOD=1.5861;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:8:17.79:0,18,124	1/1:1,0:1:3:25,3,0	0/0:5,0:3:5.94:0,6,44	0/0:3,0:2:5.97:0,6,44	0/1:6,4:10:99:108,0,100	1/1:6,0:6:11.97:127,12,0	1/1:4,0:4:8.96:70,9,0	0/0:20,0:19:41.76:0,42,324	0/0:3,0:3:5.96:0,6,44	1/1:2,0:2:6.01:73,6,0	1/1:6,0:6:14.98:124,15,0	0/0:1,0:1:2.97:0,3,20	0/0:3,0:3:5.96:0,6,43	0/0:2,0:2:3:0,3,25	0/0:2,0:2:6:0,6,53	0/0:1,0:1:3:0,3,25	0/1:23,0:23:99:335,0,232	0/0:20,0:19:53.65:0,54,406	0/0:12,0:12:26.89:0,27,212	0/0:1,0:1:3:0,3,25	0/0:3,0:3:5.96:0,6,45	0/0:1,0:1:2.97:0,3,20	0/0:1,0:1:0:0,0,0	./.	0/0:4,0:4:2.99:0,3,23	1/1:7,0:7:14.98:130,15,0	1/1:13,0:13:3.50:84,4,0	0/1:17,1:18:35.08:174,0,35
chr10	15852538	.	A	AGGGTGAGGGGTGTC	12638.88	PASS	AC=30;AF=0.556;AN=54;BaseQRankSum=5.117;DP=317;FS=5.038;HRun=0;HaplotypeScore=144.6261;InbreedingCoeff=0.9252;MQ=85.74;MQ0=0;MQRankSum=-9.226;QD=86.57;ReadPosRankSum=-0.423;VQSLOD=4.5891;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:18:36.12:1913,36,0	0/0:8,0:8:24.08:0,24,967	0/0:17,0:17:38.93:0,39,1030	0/0:19,0:19:21.88:0,22,525	0/0:14,0:14:30.10:0,30,1054	0/0:9,0:9:21.07:0,21,761	0/0:15,0:15:39.13:0,39,1410	1/1:22,0:22:39.08:1466,39,0	1/1:4,0:4:12.04:714,12,0	0/0:8,0:8:21.07:0,21,808	0/0:8,0:8:21.07:0,21,838	1/1:8,0:8:15.05:637,15,0	1/1:2,2:5:15.05:909,15,0	./.	1/1:7,0:7:18.06:887,18,0	1/1:7,0:8:21.07:1067,21,0	0/0:29,0:29:81.25:0,81,3145	1/1:9,0:9:15.05:909,15,0	1/1:6,3:9:15.05:772,15,0	1/1:11,3:14:15.05:557,15,0	1/1:14,0:14:21.05:1045,21,0	1/1:9,0:9:12.04:430,12,0	1/1:3,2:5:3.01:164,3,0	1/1:5,2:10:9.03:615,9,0	1/1:4,0:4:9.03:553,9,0	0/0:16,0:16:45.15:0,45,1737	0/0:20,0:19:48.16:0,48,1730	0/0:4,0:4:9.03:0,9,318
chr10	15852658	.	T	TCCATGCGAA	8563.20	PASS	AC=30;AF=0.556;AN=54;BaseQRankSum=-3.965;DP=375;FS=9.857;HRun=0;HaplotypeScore=82.6250;InbreedingCoeff=0.8901;MQ=76.57;MQ0=0;MQRankSum=-9.660;QD=53.52;ReadPosRankSum=-1.841;VQSLOD=3.5453;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,10:19:24:1074,24,0	0/0:8,0:8:21.07:0,21,676	0/0:9,0:9:23.90:0,24,659	0/0:13,0:12:32.37:0,32,569	0/0:17,0:17:51.14:0,51,1513	0/0:20,0:20:54.17:0,54,1646	0/0:23,0:23:66.13:0,66,1845	1/1:1,3:15:42.01:987,42,0	./.	0/0:13,0:13:39.13:0,39,1201	0/0:10,0:10:30.10:0,30,930	1/1:2,1:6:3.01:151,3,0	1/1:0,6:13:21.07:1016,21,0	1/1:6,0:6:15.03:386,15,0	1/1:0,3:8:6.02:302,6,0	1/1:0,3:10:6.02:289,6,0	0/0:34,0:34:93.29:0,93,2808	1/1:0,2:9:3.01:151,3,0	1/1:7,0:7:18.03:335,18,0	1/1:0,4:7:14.97:494,15,0	1/1:2,5:17:11.89:337,12,0	1/1:1,6:10:18.02:775,18,0	1/1:0,5:13:14.90:623,15,0	1/1:1,2:7:6.02:302,6,0	1/1:0,8:13:27.09:1342,27,0	0/0:18,0:18:54.16:0,54,1548	0/0:29,0:28:81.28:0,81,2595	0/0:14,0:14:42.13:0,42,1296
chr10	15852756	.	CTTTTTCTTTTTTCT	C	4721.51	PASS	AB=1.000;AC=28;AF=0.500;AN=56;BaseQRankSum=5.689;DP=406;FS=8.603;HRun=0;HaplotypeScore=155.8953;InbreedingCoeff=0.3373;MQ=58.46;MQ0=11;MQRankSum=1.462;QD=18.02;ReadPosRankSum=1.274;VQSLOD=3.3039;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:14:33.09:0,33,1172	1/1:1,7:8:5.73:155,6,0	0/0:21,0:7:13.90:0,14,363	0/0:24,0:9:17.23:0,17,186	1/1:0,12:13:23.87:218,24,0	1/1:9,6:16:39.08:1064,39,0	1/1:2,20:24:12.04:461,12,0	0/1:17,0:15:29.34:29,0,111	0/0:10,0:9:27.01:0,27,855	1/1:3,18:19:44.80:616,45,0	1/1:1,11:12:26.93:379,27,0	0/0:15,0:13:30.55:0,31,1006	0/1:10,0:10:38.31:38,0,81	0/1:6,0:6:10.60:11,0,150	0/0:11,0:11:27.05:0,27,904	0/0:11,0:11:22.21:0,22,865	1/1:3,19:22:6.02:246,6,0	0/0:11,0:9:24.69:0,25,642	0/1:15,0:15:63.81:64,0,166	0/0:13,0:13:0.30:0,0,157	0/1:8,0:7:14.99:15,0,63	0/1:19,0:19:99:112,0,199	0/1:13,0:13:45.83:46,0,151	0/1:14,0:14:19.58:20,0,85	0/0:13,0:9:21.04:0,21,664	1/1:1,20:21:55.83:722,56,0	1/1:6,14:20:15.52:500,16,0	1/1:1,0:1:3:26,3,0
chr10	15852762	.	CTTTTTTCTTT	C	5286.04	PASS	AB=0.929;AC=34;AF=0.630;AN=54;BaseQRankSum=0.862;DP=377;FS=17.986;HRun=0;HaplotypeScore=122.1581;InbreedingCoeff=0.5603;MQ=55.25;MQ0=12;MQRankSum=1.827;QD=20.02;ReadPosRankSum=2.096;VQSLOD=2.9042;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:13:32.92:0,33,759	1/1:7,0:7:5.52:80,6,0	0/0:20,0:6:8.37:0,8,184	0/0:23,0:8:11.83:0,12,71	1/1:13,0:13:8.90:60,9,0	1/1:13,0:13:33.02:566,33,0	1/1:22,0:22:12.04:266,12,0	1/1:11,2:11:24.03:353,24,0	0/0:10,0:9:21.06:0,21,474	0/1:21,0:19:48.15:207,0,48	1/1:11,0:11:1.48:146,1,0	0/0:14,0:12:23.88:0,24,529	1/1:6,4:10:9.02:212,9,0	0/1:3,2:5:48.03:125,0,48	0/0:11,0:11:27.89:0,28,486	0/0:9,0:9:3.11:0,3,462	1/1:22,0:21:6.02:136,6,0	0/0:11,0:9:22.65:0,23,383	1/1:4,12:15:32.98:547,33,0	1/1:10,1:11:23.84:285,24,0	1/1:6,2:7:8.94:133,9,0	1/1:9,8:17:47.98:843,48,0	1/1:9,3:12:30.04:466,30,0	1/1:7,3:11:20.98:360,21,0	0/1:14,0:10:6.61:7,0,419	0/1:20,0:20:43.14:222,0,43	1/1:18,0:17:15.47:273,15,0	./.
chr10	15852769	.	CTT	C	321.51	PASS	AB=0.953;AC=25;AF=0.446;AN=56;BaseQRankSum=7.752;DP=401;FS=0.000;HRun=16;HaplotypeScore=104.2496;InbreedingCoeff=0.3616;MQ=48.45;MQ0=16;MQRankSum=-3.658;QD=1.33;ReadPosRankSum=5.404;VQSLOD=-0.5718;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:13:20.68:0,21,153	0/1:9,0:9:0.15:0,0,20	0/0:18,0:4:3:0,3,26	0/0:19,1:6:0.47:0,0,1	0/0:15,1:16:4.81:0,5,28	1/1:13,0:14:3.35:60,3,0	0/1:26,1:27:42.51:46,0,43	1/1:12,0:11:1.85:28,2,0	0/0:9,0:8:9.01:0,9,88	0/1:25,1:24:1.64:2,0,91	1/1:12,0:12:4.22:17,4,0	0/0:13,0:11:11.21:0,11,86	0/1:7,0:7:2.73:16,0,3	0/1:5,0:5:5.16:5,0,15	0/0:11,0:10:8.55:0,9,75	0/0:8,0:8:12:0,12,110	1/1:22,1:23:5.38:24,5,0	0/0:12,0:9:13.62:0,14,89	1/1:15,0:13:5.11:53,5,0	0/1:14,1:17:6.94:27,0,7	0/1:11,0:9:3.01:3,0,21	1/1:17,1:18:13.23:96,13,0	1/1:10,0:10:8.25:39,8,0	1/1:11,0:11:5.21:28,5,0	0/0:14,0:10:17.54:0,18,117	0/0:23,0:23:6.41:0,6,76	1/1:19,1:18:9.50:41,10,0	0/0:1,0:1:2.98:0,3,22
chr10	15852785	.	T	TTC	1517.49	PASS	AC=34;AF=0.630;AN=54;BaseQRankSum=3.715;DP=294;FS=19.119;HRun=0;HaplotypeScore=85.9445;InbreedingCoeff=0.8592;MQ=39.97;MQ0=13;MQRankSum=-2.872;QD=10.92;ReadPosRankSum=-0.673;VQSLOD=1.5921;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,0:3:5.95:59,6,0	0/0:9,0:9:13.54:0,14,97	1/1:1,0:1:2.50:9,2,0	./.	0/0:10,0:10:11.16:0,11,86	0/0:15,0:15:35.19:0,35,294	0/0:23,0:23:26.45:0,26,215	1/1:12,2:12:21.71:125,22,0	1/1:3,0:4:5.94:43,6,0	0/0:18,0:16:41.86:0,42,352	0/0:8,0:8:8.16:0,8,72	1/1:12,0:12:18.72:124,19,0	1/1:8,2:10:19.02:147,19,0	1/1:8,0:9:19.43:158,19,0	1/1:7,0:6:14.92:87,15,0	1/1:4,0:4:8.92:64,9,0	0/0:26,0:24:23.45:0,23,179	1/1:3,0:3:5.99:62,6,0	1/1:11,1:10:16.70:101,17,0	1/1:8,3:10:17.02:150,17,0	1/1:9,3:10:17.60:149,18,0	1/1:10,1:11:22.72:127,23,0	1/1:5,0:5:11.35:57,11,0	1/1:10,0:9:20.91:140,21,0	1/1:8,0:7:17.76:121,18,0	0/0:17,0:18:41.56:0,42,308	0/0:18,0:16:19.07:0,19,127	0/0:2,0:2:4.59:0,5,16
chr10	15852806	.	A	AG	5217.85	PASS	AC=32;AF=0.593;AN=54;BaseQRankSum=0.929;DP=309;FS=21.392;HRun=2;HaplotypeScore=61.8099;InbreedingCoeff=0.9288;MQ=48.29;MQ0=5;MQRankSum=-2.354;QD=28.99;ReadPosRankSum=0.619;VQSLOD=3.1151;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,5:7:9.03:129,9,0	0/0:8,0:8:24.08:0,24,297	0/0:4,0:1:3.01:0,3,37	./.	0/0:10,0:10:18.05:0,18,216	0/0:15,0:15:39:0,39,444	0/0:27,0:27:54.15:0,54,652	1/1:6,9:15:27.09:378,27,0	1/1:0,10:10:15.05:216,15,0	0/0:17,0:17:45.09:0,45,537	0/0:4,0:4:12.04:0,12,149	1/1:0,14:14:33.11:474,33,0	1/1:0,10:10:24.08:344,24,0	1/1:0,10:10:24.08:342,24,0	1/1:1,9:9:24.08:344,24,0	1/1:1,9:10:21.07:302,21,0	0/0:13,1:13:18.06:0,18,223	1/1:1,11:11:24.08:341,24,0	1/1:4,5:8:12.04:173,12,0	1/1:1,11:11:21.07:302,21,0	1/1:3,14:15:21.03:277,21,0	1/1:0,15:15:42.14:578,42,0	1/1:0,6:6:15.05:202,15,0	1/1:0,13:12:36.12:514,36,0	1/1:1,9:8:21.07:302,21,0	0/0:15,0:15:39.11:0,39,468	0/0:12,0:11:18.05:0,18,217	0/0:2,0:2:6.02:0,6,74
chr10	15853759	.	G	GAA	6148.10	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-9.503;DP=659;FS=3.041;HRun=9;HaplotypeScore=85.4385;InbreedingCoeff=0.9993;MQ=77.74;MQ0=1;MQRankSum=-1.084;QD=30.89;ReadPosRankSum=-2.958;VQSLOD=4.5977;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,108,1135	0/0:8,0:8:24.06:0,24,255	0/0:24,0:24:62.95:0,63,621	0/0:22,0:22:31.70:0,32,310	0/0:26,0:27:65.86:0,66,674	0/0:20,0:20:51.11:0,51,542	0/0:19,0:19:48.10:0,48,511	1/1:7,27:36:87.25:1246,87,0	0/0:19,0:19:42.07:0,42,445	0/0:27,0:27:72.17:0,72,766	0/0:16,0:16:48.11:0,48,502	0/0:27,0:27:66.10:0,66,689	1/1:4,16:23:53.23:758,53,0	1/1:7,12:19:27.09:416,27,0	0/0:30,0:31:63.08:0,63,725	0/0:30,0:30:69.13:0,69,734	0/0:34,0:34:77.69:0,78,795	0/0:19,0:19:48.06:0,48,499	1/1:4,15:22:53.61:719,54,0	1/1:1,12:14:35.56:469,36,0	1/1:1,12:16:32.60:464,33,0	1/1:5,18:23:49.42:680,49,0	1/1:2,18:21:45.45:675,45,0	1/1:3,19:24:48.16:721,48,0	0/0:42,0:42:85.23:0,85,1090	0/0:13,0:13:36.09:0,36,383	0/0:26,0:26:69.15:0,69,733	0/0:13,0:13:33.08:0,33,351
chr10	15854531	.	G	GA	7178.30	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=18.172;DP=650;FS=11.357;HRun=0;HaplotypeScore=93.0492;InbreedingCoeff=0.9988;MQ=86.65;MQ0=0;MQRankSum=-3.724;QD=38.59;ReadPosRankSum=2.638;VQSLOD=4.3472;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,114,1461	1/1:0,7:7:21.02:276,21,0	0/0:26,0:26:59.62:0,60,860	0/0:23,0:23:58.89:0,59,776	1/1:0,20:20:51.17:723,51,0	1/1:0,20:20:48.16:683,48,0	1/1:2,21:23:68.58:934,69,0	0/0:28,0:28:74.79:0,75,940	0/0:16,0:16:45.12:0,45,594	1/1:3,30:33:96.27:1340,96,0	1/1:0,15:15:39.13:556,39,0	0/0:30,0:30:86.88:0,87,1135	0/0:26,0:26:78.23:0,78,1041	0/0:24,0:24:66.16:0,66,852	0/0:28,0:28:81.24:0,81,1082	0/0:26,0:26:75.25:0,75,1047	1/1:0,17:17:42.14:600,42,0	0/0:28,1:28:44.05:0,44,1104	0/0:26,0:26:69.16:0,69,893	0/0:15,0:15:42.11:0,42,532	0/0:32,0:32:96.30:0,96,1321	0/0:25,0:25:72.24:0,72,991	0/0:26,0:26:69.10:0,69,903	0/0:31,0:31:93.29:0,93,1279	0/0:14,0:14:42.13:0,42,569	1/1:1,21:22:64.96:858,65,0	1/1:1,21:21:66.19:912,66,0	1/1:0,7:7:21.07:297,21,0
chr10	15857349	.	TGCCTCG	T	8957.77	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=16.436;DP=681;FS=6.274;HRun=0;HaplotypeScore=176.2027;InbreedingCoeff=0.9997;MQ=91.03;MQ0=0;MQRankSum=-16.769;QD=43.48;ReadPosRankSum=0.928;VQSLOD=4.5359;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,156,5285	0/0:13,0:13:39.13:0,39,1377	0/0:36,0:37:90.18:0,90,2597	0/0:26,0:26:66.17:0,66,1966	0/0:23,0:23:63.22:0,63,2202	0/0:14,0:14:42.14:0,42,1475	0/0:30,0:30:84.24:0,84,2606	1/1:1,13:14:39.09:783,39,0	0/0:27,0:27:78.24:0,78,2604	0/0:21,0:21:63.19:0,63,1841	0/0:14,0:14:36.12:0,36,1221	0/0:37,0:37:99:0,108,3712	1/1:2,18:20:51.18:1191,51,0	1/1:1,25:26:69.24:1626,69,0	0/0:19,0:19:54.19:0,54,1862	0/0:18,0:18:54.19:0,54,1868	0/0:28,0:28:81.28:0,81,2764	0/0:17,0:17:51.18:0,51,1757	1/1:3,14:17:42.05:792,42,0	1/1:3,25:28:63.22:1465,63,0	1/1:5,23:28:27.07:607,27,0	1/1:5,18:23:39.13:890,39,0	1/1:1,20:21:39.13:901,39,0	1/1:5,24:29:30.04:703,30,0	0/0:27,0:27:72.21:0,72,2352	0/0:34,0:34:99:0,99,3229	0/0:23,0:23:63.22:0,63,2126	0/0:14,0:14:42.14:0,42,1470
chr10	15859754	.	C	CTG	5137.49	PASS	AB=0.825;AC=48;AF=0.857;AN=56;BaseQRankSum=0.417;DP=730;FS=0.000;HRun=0;HaplotypeScore=153.1275;InbreedingCoeff=0.2436;MQ=65.70;MQ0=10;MQRankSum=-0.388;QD=7.67;ReadPosRankSum=2.769;VQSLOD=4.6308;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:31,0:31:32.51:246,33,0	1/1:9,0:9:11.58:84,12,0	0/0:26,0:20:11.69:0,12,79	0/0:34,0:20:14.10:0,14,96	0/1:24,0:24:11.89:198,0,12	1/1:21,0:21:8.17:207,8,0	0/1:33,0:33:30.91:221,0,31	1/1:31,0:30:23.76:163,24,0	1/1:34,0:34:44.57:350,45,0	1/1:36,0:34:18.59:439,19,0	1/1:15,0:14:14.95:117,15,0	1/1:24,0:24:32.65:278,33,0	1/1:23,1:25:8.80:79,9,0	1/1:29,0:28:4.97:42,5,0	1/1:30,0:29:41.58:339,42,0	1/1:27,0:27:38.66:284,39,0	1/1:26,5:31:53.52:514,54,0	1/1:24,0:24:44.10:328,44,0	1/1:24,0:24:3.85:22,4,0	1/1:12,1:14:2.98:23,3,0	1/1:30,0:30:7.82:49,8,0	1/1:28,0:28:9:93,9,0	1/1:17,0:15:2.99:24,3,0	1/1:29,0:27:0.99:42,1,0	1/1:22,0:22:35.96:300,36,0	0/1:18,15:36:12.56:358,0,13	0/1:14,18:33:22.18:125,0,22	1/1:12,0:12:23.82:212,24,0
chr10	15859777	.	TGA	T	1327.95	PASS	AB=0.978;AC=33;AF=0.660;AN=50;BaseQRankSum=3.667;DP=643;FS=39.558;HRun=0;HaplotypeScore=147.2048;InbreedingCoeff=0.0058;MQ=49.12;MQ0=14;MQRankSum=0.341;QD=2.55;ReadPosRankSum=-3.337;VQSLOD=-0.2150;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:26,1:28:26.40:190,26,0	0/1:9,0:8:14.51:15,0,33	./.	./.	0/1:24,0:24:18.63:19,0,78	0/1:22,0:21:36.87:37,0,102	0/1:35,0:36:38.52:39,0,143	./.	1/1:28,2:31:14.76:104,15,0	0/1:37,0:35:40.96:41,0,191	0/1:15,0:14:17.45:17,0,19	1/1:26,1:30:17.07:123,17,0	0/1:17,0:18:19.50:56,0,19	0/1:21,0:20:9.16:29,0,9	1/1:27,1:32:4.42:97,4,0	1/1:16,4:23:20.58:162,21,0	0/1:34,1:35:38.16:38,0,265	1/1:22,2:23:20.63:159,21,0	0/1:13,0:12:5.08:5,0,42	1/1:18,0:18:11.85:83,12,0	1/1:21,0:21:11.75:71,12,0	1/1:17,0:18:5.90:37,6,0	1/1:15,0:13:11.71:70,12,0	0/1:22,2:24:22.71:55,0,23	1/1:21,1:24:8.57:49,9,0	0/0:32,0:32:28.74:0,29,304	0/0:31,0:31:26.66:0,27,226	0/0:9,0:9:14.48:0,14,125
chr10	15859847	.	G	GGAGACA	1962.37	PASS	AB=0.928;AC=18;AF=0.375;AN=48;BaseQRankSum=3.834;DP=686;FS=9.332;HRun=0;HaplotypeScore=167.4337;InbreedingCoeff=0.6477;MQ=48.89;MQ0=27;MQRankSum=-8.379;QD=7.52;ReadPosRankSum=-5.910;VQSLOD=-0.6454;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:21,11:35:9.03:146,9,0	0/0:11,0:11:21.07:0,21,407	./.	0/0:64,0:21:2.99:0,3,23	0/0:19,0:19:24.07:0,24,425	0/0:20,0:20:36.12:0,36,704	0/0:35,0:35:39.01:0,39,697	./.	1/1:15,10:25:9.03:166,9,0	0/0:38,0:37:33.11:0,33,654	0/0:11,0:11:9.03:0,9,181	0/1:16,8:27:44.68:265,0,45	0/0:23,0:22:4.65:0,5,23	./.	1/1:20,15:34:21.07:364,21,0	1/1:11,17:30:33.11:805,33,0	0/0:31,0:31:48.12:0,48,827	1/1:11,6:17:3.01:96,3,0	1/1:21,0:20:2.94:18,3,0	0/1:13,0:13:0:0,0,0	0/0:21,0:21:0:0,0,0	0/1:17,0:17:0:0,0,0	./.	0/1:21,0:19:0:0,0,0	1/1:11,8:19:12.04:258,12,0	0/0:27,0:27:27.09:0,27,529	0/0:24,0:23:48.16:0,48,904	0/0:18,0:18:35.78:0,36,698
chr10	15859873	.	AGACAGAGACAGAGACAGAGAAGT	A	2546.01	PASS	AB=0.649;AC=11;AF=0.220;AN=50;BaseQRankSum=6.800;DP=649;FS=14.521;HRun=0;HaplotypeScore=304.8710;InbreedingCoeff=0.8940;MQ=54.90;MQ0=18;MQRankSum=-0.300;QD=23.57;ReadPosRankSum=-4.324;VQSLOD=0.6501;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:60.21:0,60,2592	0/0:11,0:11:30.10:0,30,2490	0/0:27,0:9:19.98:0,20,752	0/0:34,0:17:22.15:0,22,1253	0/0:19,0:18:51.18:0,51,3379	0/0:19,0:19:54.19:0,54,4269	0/0:33,0:33:93.79:0,94,5983	1/1:23,0:21:33.09:690,33,0	0/0:28,0:28:54.65:0,55,2361	0/0:39,0:38:99:0,102,6370	0/0:11,0:11:30.10:0,30,1726	0/0:25,0:25:43.03:0,43,2354	1/1:7,13:19:7.20:456,7,0	1/1:14,0:14:18.06:434,18,0	0/0:35,0:34:79.14:0,79,3216	0/0:31,0:31:72.24:0,72,3075	0/0:35,0:35:99:0,99,6624	0/0:15,0:14:24.08:0,24,1035	1/1:3,13:15:39.07:1039,39,0	./.	0/1:11,13:24:0:0,0,1	./.	1/1:3,8:11:3.01:82,3,0	./.	0/0:23,0:23:48.16:0,48,1855	0/0:23,0:23:63.21:0,63,4148	0/0:31,0:30:87.30:0,87,6355	0/0:20,0:20:57.20:0,57,4358
chr10	15859891	.	AGAAGT	A	2267.19	PASS	AB=1.000;AC=11;AF=0.220;AN=50;BaseQRankSum=7.661;DP=608;FS=18.051;HRun=0;HaplotypeScore=138.0642;InbreedingCoeff=0.9014;MQ=61.87;MQ0=5;MQRankSum=0.826;QD=27.32;ReadPosRankSum=-2.019;VQSLOD=1.6368;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:60.14:0,60,1296	0/0:12,0:12:30.10:0,30,851	0/0:27,0:12:29.59:0,30,604	0/0:36,0:22:46.65:0,47,1017	0/0:17,0:17:51.16:0,51,1348	0/0:23,0:23:66.23:0,66,1857	0/0:35,0:35:99:0,99,2522	1/1:0,21:21:63.19:1228,63,0	0/0:32,0:32:72.24:0,72,1513	0/0:30,0:30:87.30:0,87,2368	0/0:11,0:11:30.10:0,30,753	0/0:27,0:27:57.12:0,57,1238	1/1:13,0:13:8.88:150,9,0	1/1:1,11:12:15.05:312,15,0	0/0:33,0:33:75.19:0,75,1731	0/0:34,0:34:84.29:0,84,1913	0/0:29,0:29:81.28:0,81,2239	0/0:12,0:12:24.08:0,24,562	1/1:14,0:13:36.06:671,36,0	./.	./.	0/1:15,0:15:0:0,0,0	1/1:8,0:8:3.01:62,3,0	./.	0/0:19,0:19:48.16:0,48,1092	0/0:20,0:20:60.21:0,60,1593	0/0:37,0:36:99:0,105,2780	0/0:23,0:23:69.24:0,69,1892
chr10	15860648	.	A	AC	8850.87	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=7.486;DP=567;FS=1.453;HRun=5;HaplotypeScore=224.4899;InbreedingCoeff=0.7624;MQ=60.05;MQ0=6;MQRankSum=-6.810;QD=17.74;ReadPosRankSum=2.383;VQSLOD=2.4362;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,14:20:14.44:154,14,0	1/1:6,7:13:22.23:238,22,0	0/0:28,0:18:45.11:0,45,481	0/0:39,0:26:62.64:0,63,642	1/1:8,10:17:9.33:119,9,0	1/1:5,18:23:33.45:375,33,0	1/1:6,22:25:26.52:295,27,0	1/1:10,13:22:44.31:540,44,0	1/1:5,14:20:30.33:313,30,0	1/1:6,31:38:93.26:1205,93,0	1/1:1,12:14:24.01:310,24,0	1/1:6,7:13:6.36:59,6,0	1/1:4,15:20:36.07:445,36,0	1/1:7,11:19:29.46:301,29,0	1/1:10,13:25:31.35:300,31,0	1/1:2,20:22:35.99:428,36,0	1/1:8,8:15:31.99:353,32,0	1/1:2,12:15:36.12:471,36,0	1/1:5,7:10:21.07:272,21,0	1/1:6,14:20:27.67:317,28,0	1/1:9,15:23:8.92:118,9,0	1/1:5,13:17:23.86:291,24,0	1/1:2,7:9:3.95:40,4,0	1/1:5,18:22:29.58:292,30,0	1/1:5,10:16:20.68:234,21,0	1/1:7,22:28:67.32:945,67,0	1/1:6,8:17:31.81:395,32,0	1/1:1,2:2:3.01:39,3,0
chr10	15860655	.	G	GAC	2248.88	PASS	AB=0.884;AC=36;AF=0.692;AN=52;BaseQRankSum=0.411;DP=603;FS=2.369;HRun=0;HaplotypeScore=254.2511;InbreedingCoeff=0.0871;MQ=52.44;MQ0=9;MQRankSum=-0.943;QD=5.11;ReadPosRankSum=-2.180;VQSLOD=2.7530;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:24:0.90:2,1,0	0/1:9,3:12:26.36:39,0,26	./.	0/0:40,0:23:3.01:0,3,35	0/0:18,2:19:0.47:0,0,1	0/1:22,5:25:12.98:189,0,13	1/1:31,1:29:9.03:105,9,0	1/1:19,0:18:1.36:3,1,0	1/1:20,0:20:3.87:27,4,0	1/1:35,7:42:18.56:660,19,0	1/1:13,1:14:9.01:101,9,0	1/1:12,0:12:5.74:38,6,0	1/1:22,0:22:5.35:49,5,0	0/0:19,0:19:2.28:0,2,6	1/1:21,1:22:6.02:83,6,0	1/1:21,0:22:13.75:122,14,0	0/1:14,3:16:25.14:173,0,25	1/1:17,0:16:14.65:115,15,0	1/1:17,0:13:4.54:27,5,0	0/0:22,0:22:0.20:0,0,1	./.	1/1:20,0:19:3.45:26,3,0	0/0:8,0:8:0.47:0,0,1	1/1:21,0:20:2.93:23,3,0	0/1:21,0:21:3.34:3,0,30	0/1:22,7:27:6.29:417,0,6	0/1:21,0:20:99:134,0,108	1/1:5,1:5:2.81:39,3,0
chr10	15860673	.	CACACACAT	C	2078.12	PASS	AB=0.991;AC=36;AF=0.667;AN=54;BaseQRankSum=-3.257;DP=678;FS=20.016;HRun=0;HaplotypeScore=272.5181;InbreedingCoeff=-0.2405;MQ=36.89;MQ0=15;MQRankSum=4.317;QD=3.62;ReadPosRankSum=-6.166;VQSLOD=-0.5491;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:27:4.25:0,4,29	0/1:14,0:14:17.24:17,0,62	./.	0/0:47,0:12:13.32:0,13,128	1/1:21,0:21:8.96:69,9,0	0/1:25,0:23:22.38:48,0,22	1/1:32,0:29:8.22:51,8,0	0/1:23,0:20:99:152,0,246	1/1:22,0:21:11.74:87,12,0	0/1:38,0:38:99:131,0,721	1/1:14,0:12:8.33:52,8,0	0/1:17,0:17:22.80:23,0,48	0/1:18,3:21:13.36:211,0,13	1/1:21,4:25:18.97:211,19,0	0/1:23,0:23:7.51:19,0,8	0/1:28,0:28:13.10:97,0,13	0/1:21,0:18:35.17:113,0,35	0/1:16,0:15:99:117,0,126	0/1:26,0:21:99:106,0,114	1/1:21,5:26:11.50:121,12,0	1/1:33,1:28:6.30:51,6,0	1/1:27,2:28:8.88:63,9,0	1/1:12,1:12:0.47:1,0,0	1/1:20,3:22:15.45:144,15,0	0/1:19,0:19:16.57:17,0,70	0/1:29,0:27:99:127,0,475	0/1:24,0:23:88.39:88,0,158	1/1:11,0:10:3.96:122,4,0
chr10	15860679	.	CAT	C	2565.61	PASS	AB=0.934;AC=42;AF=0.750;AN=56;BaseQRankSum=-0.076;DP=685;FS=9.097;HRun=0;HaplotypeScore=238.7791;InbreedingCoeff=-0.0374;MQ=36.88;MQ0=17;MQRankSum=3.145;QD=4.18;ReadPosRankSum=-5.721;VQSLOD=0.5241;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:28,1:27:7.16:45,7,0	0/1:13,1:14:30.38:36,0,30	0/0:27,0:1:2.04:0,2,6	0/0:44,0:7:12.49:0,12,78	1/1:21,1:22:8.66:68,9,0	1/1:23,4:25:5.61:135,6,0	1/1:32,0:29:8.67:52,9,0	0/1:20,1:18:83.51:160,0,84	1/1:20,2:21:14.72:105,15,0	0/1:34,3:37:99:256,0,138	1/1:12,2:12:11.33:77,11,0	1/1:21,0:21:1.21:41,1,0	1/1:20,3:23:4.36:109,4,0	1/1:22,2:24:17.91:93,18,0	1/1:23,1:24:6.43:63,6,0	1/1:25,1:26:11.01:112,11,0	0/1:20,2:19:2.47:143,0,2	0/1:13,2:14:3.14:91,0,3	0/1:25,2:21:96.71:130,0,97	1/1:22,1:23:12.28:98,12,0	1/1:35,2:31:5.95:50,6,0	1/1:25,5:29:11.88:87,12,0	0/1:12,2:13:0:0,0,0	1/1:17,7:23:14.50:120,14,0	0/1:18,0:18:19.03:57,0,19	0/1:31,0:29:34.18:307,0,34	0/1:23,2:24:80.07:136,0,80	1/1:12,0:11:3.89:140,4,0
chr10	15860681	.	T	TACAC	2692.96	PASS	AB=0.996;AC=40;AF=0.714;AN=56;BaseQRankSum=-0.470;DP=687;FS=0.000;HRun=0;HaplotypeScore=249.4862;InbreedingCoeff=0.3101;MQ=37.88;MQ0=17;MQRankSum=1.890;QD=4.80;ReadPosRankSum=0.375;VQSLOD=2.3951;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:27:0.67:3,1,0	1/1:13,1:15:7.55:62,8,0	0/1:26,0:1:0:0,0,0	0/0:45,0:7:5.02:0,5,48	1/1:15,4:20:8.62:104,9,0	1/1:26,2:26:11.95:159,12,0	0/1:30,0:28:0.06:1,0,0	0/0:22,0:19:0.13:0,0,127	0/0:23,0:22:1.21:0,1,3	1/1:35,2:37:65.33:662,65,0	1/1:11,1:10:3:25,3,0	1/1:21,0:21:8.17:103,8,0	0/1:23,0:23:12.86:13,0,26	1/1:23,0:22:3.30:12,3,0	1/1:24,0:24:5.49:26,5,0	1/1:26,0:27:8.06:41,8,0	1/1:19,2:19:20.63:248,21,0	0/1:16,0:15:22.48:49,0,22	0/1:26,0:21:7.03:7,0,44	1/1:23,0:23:1.04:2,1,0	0/0:35,0:30:0.47:0,0,1	0/1:31,0:30:0:0,0,0	0/1:14,0:13:0.27:0,0,0	0/1:24,0:22:0.05:0,0,0	1/1:19,0:19:0.32:1,0,0	1/1:26,4:29:65.65:798,66,0	1/1:25,1:25:20.31:166,20,0	1/1:11,1:11:24.06:332,24,0
chr10	15860685	.	C	CAT	565.66	PASS	AB=0.901;AC=15;AF=0.268;AN=56;BaseQRankSum=3.580;DP=697;FS=0.000;HRun=0;HaplotypeScore=244.3101;InbreedingCoeff=0.3691;MQ=36.16;MQ0=17;MQRankSum=0.026;QD=2.39;ReadPosRankSum=1.870;VQSLOD=2.3106;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:24,6:28:15.16:22,0,15	0/0:15,0:15:8.20:0,8,62	1/1:30,0:1:0.89:2,1,0	0/0:48,0:5:11.77:0,12,124	0/1:20,0:20:11.32:11,0,35	0/0:28,0:26:28.50:0,29,162	0/0:31,0:28:5.33:0,5,29	0/0:26,0:23:62.51:0,63,567	1/1:17,7:23:10.43:55,10,0	0/0:39,0:39:81.41:0,81,501	0/0:11,0:9:5.54:0,6,38	1/1:17,4:22:14.35:98,14,0	0/1:24,0:24:1.23:1,0,91	0/0:23,0:22:12.18:0,12,62	1/1:14,9:24:11.70:129,12,0	1/1:26,3:29:3.59:147,4,0	0/0:22,0:19:26.66:0,27,205	0/1:13,2:14:20.86:204,0,21	0/0:25,0:21:8.20:0,8,286	0/0:23,0:23:11.73:0,12,97	0/0:36,0:31:2.83:0,3,25	0/0:30,0:30:5.92:0,6,41	0/0:15,0:14:0.47:0,0,1	0/0:21,0:19:9.46:0,9,75	0/1:14,5:19:14.26:51,0,14	0/0:30,0:28:15.43:0,15,325	0/0:26,0:25:31.68:0,32,229	0/0:11,0:11:29.14:0,29,195
chr10	15860723	.	TAC	T	1020.16	PASS	AB=0.930;AC=17;AF=0.304;AN=56;BaseQRankSum=-0.026;DP=687;FS=9.584;HRun=0;HaplotypeScore=188.9039;InbreedingCoeff=0.6679;MQ=42.25;MQ0=22;MQRankSum=1.769;QD=4.00;ReadPosRankSum=-0.159;VQSLOD=1.6463;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,16:28:9.90:118,10,0	0/0:11,0:11:8.56:0,9,113	0/0:31,0:3:6.01:0,6,76	0/0:42,0:5:8.52:0,9,102	0/0:31,0:31:36.11:0,36,574	0/0:26,0:25:6.36:0,6,475	0/0:37,0:33:20.72:0,21,308	0/0:28,0:27:61.45:0,61,716	1/1:3,22:24:19.87:233,20,0	0/0:33,0:33:86.78:0,87,1392	0/0:14,0:12:30.10:0,30,503	1/1:2,23:25:9.03:117,9,0	0/0:26,0:26:15.05:0,15,228	0/0:27,0:24:5.62:0,6,57	1/1:5,17:22:9.03:117,9,0	1/1:6,22:28:25.05:281,25,0	0/0:22,0:18:36.53:0,37,574	0/1:7,8:14:18.28:202,0,18	0/0:20,0:17:32.94:0,33,479	0/0:13,0:13:2.41:0,2,49	0/1:34,0:28:0.11:0,0,0	0/1:26,0:27:0:0,0,0	0/1:13,0:12:0:1,0,0	0/1:20,0:18:0.47:1,0,0	1/1:3,12:16:9.97:118,10,0	0/0:38,0:35:90.27:0,90,1442	0/0:20,0:19:27.07:0,27,455	0/0:13,0:13:33.11:0,33,550
chr10	15860735	.	T	TAC	968.45	PASS	AB=0.736;AC=8;AF=0.143;AN=56;BaseQRankSum=-0.813;DP=703;FS=0.000;HRun=0;HaplotypeScore=181.7933;InbreedingCoeff=0.4938;MQ=43.00;MQ0=25;MQRankSum=-8.341;QD=8.00;ReadPosRankSum=-2.027;VQSLOD=2.4420;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:28:16.50:0,17,197	0/0:16,0:16:21.65:0,22,236	0/0:27,0:3:6.02:0,6,65	0/0:36,0:4:5.96:0,6,50	0/0:29,0:29:45.14:0,45,565	0/0:24,0:23:35.89:0,36,422	0/0:35,0:32:32.81:0,33,396	0/1:27,10:36:75.13:699,0,75	0/0:28,0:27:29.94:0,30,301	0/0:35,0:34:83.95:0,84,1005	0/0:15,0:14:36.12:0,36,462	0/0:27,0:27:14.81:0,15,168	0/1:14,12:26:35.50:84,0,36	1/1:11,16:24:2.23:19,2,0	0/0:21,0:21:8.97:0,9,111	0/0:30,0:30:29.76:0,30,371	0/0:20,0:16:36.11:0,36,461	0/0:19,0:18:35.83:0,36,332	1/1:14,4:13:21.24:245,21,0	1/1:11,2:13:3.01:50,3,0	0/0:35,6:35:0.30:0,0,1	0/0:15,9:24:0:0,0,0	0/0:7,4:11:0:0,0,0	0/0:16,3:17:0.26:0,0,1	0/0:16,0:16:12.09:0,12,150	0/0:37,0:34:90.19:0,90,1097	0/0:18,0:17:27.01:0,27,347	0/0:22,0:22:56.90:0,57,685
chr10	15860755	.	TAC	T	512.73	PASS	AB=0.800;AC=6;AF=0.107;AN=56;BaseQRankSum=0.229;DP=736;FS=7.258;HRun=0;HaplotypeScore=187.6445;InbreedingCoeff=0.0695;MQ=43.72;MQ0=23;MQRankSum=-7.854;QD=3.37;ReadPosRankSum=-0.620;VQSLOD=1.8533;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:30:42.07:0,42,701	0/0:13,0:13:26.64:0,27,424	0/0:23,0:6:10.55:0,11,112	0/0:36,1:6:12.04:0,12,188	0/0:27,0:27:48.16:0,48,775	0/0:21,0:21:36.23:0,36,659	0/0:44,0:40:54.11:0,54,878	0/1:19,16:34:99:455,0,241	0/0:31,0:31:42.14:0,42,696	0/0:39,0:37:93.31:0,93,1520	0/0:15,0:15:45.15:0,45,765	0/0:30,0:30:30.01:0,30,473	0/1:19,11:29:34.64:35,0,84	0/1:19,11:27:15.89:25,0,16	0/0:26,0:25:33:0,33,502	0/0:32,0:32:43.18:0,43,692	0/0:27,0:23:54.14:0,54,826	0/1:18,1:18:2.89:3,0,500	0/1:15,5:14:80.18:104,0,80	0/0:10,2:12:3.45:0,3,13	0/0:32,9:36:2.72:0,3,7	0/0:12,8:20:1.25:0,1,3	0/0:10,3:13:2.13:0,2,7	0/1:16,2:16:0.47:1,0,0	0/0:18,0:18:20.37:0,20,347	0/0:41,0:39:99:0,100,1605	0/0:17,0:17:36.12:0,36,592	0/0:25,0:25:69.19:0,69,1120
chr10	15860790	.	GCA	G	8827.21	PASS	AB=0.633;AC=37;AF=0.661;AN=56;BaseQRankSum=6.470;DP=764;FS=9.169;HRun=0;HaplotypeScore=154.9590;InbreedingCoeff=0.9144;MQ=50.09;MQ0=22;MQRankSum=1.013;QD=19.07;ReadPosRankSum=0.555;VQSLOD=4.3602;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,1:39:35.82:0,36,1069	1/1:4,5:10:18.05:212,18,0	0/0:50,0:16:24.05:0,24,337	0/0:51,1:19:18.30:0,18,489	1/1:7,16:24:32.91:375,33,0	1/1:2,23:26:53.99:622,54,0	1/1:14,23:37:69.19:810,69,0	1/1:9,15:23:19.89:427,20,0	0/0:29,0:29:69.24:0,69,1108	0/1:16,21:38:14.54:773,0,15	1/1:10,4:14:24.04:275,24,0	0/0:32,0:32:63.14:0,63,1006	1/1:3,18:20:32.93:374,33,0	1/1:5,20:24:26.91:297,27,0	0/0:31,0:31:60.13:0,60,927	0/0:26,0:26:57.01:0,57,919	1/1:3,24:28:54.16:655,54,0	0/0:22,0:21:49.94:0,50,776	1/1:11,5:13:19.30:249,19,0	1/1:2,7:9:18.01:202,18,0	1/1:8,50:55:66.60:792,67,0	1/1:5,6:11:17.79:206,18,0	1/1:2,12:16:20.50:232,20,0	1/1:9,15:21:29.77:364,30,0	0/0:19,0:19:29.91:0,30,466	1/1:10,32:43:86.22:1029,86,0	1/1:4,10:14:23.77:277,24,0	1/1:2,20:22:54.16:655,54,0
chr10	15860995	.	CCAATA	C	7350.76	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=13.165;DP=689;FS=2.721;HRun=0;HaplotypeScore=176.7620;InbreedingCoeff=0.9854;MQ=77.09;MQ0=0;MQRankSum=-14.365;QD=40.39;ReadPosRankSum=1.238;VQSLOD=5.1198;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,117,3643	0/0:7,0:7:18.06:0,18,477	0/0:15,0:15:42.62:0,43,1139	0/0:21,0:21:54.11:0,54,1392	0/0:26,0:26:72.25:0,72,2233	0/0:16,0:16:45.15:0,45,1408	0/0:45,0:45:99:0,132,4052	1/1:3,19:22:51.62:1029,52,0	0/0:31,0:31:93.30:0,93,2759	0/0:32,0:32:88.17:0,88,2525	0/0:18,0:18:54.11:0,54,1315	0/0:39,0:39:99:0,117,3597	1/1:2,23:25:63.18:1350,63,0	1/1:0,31:31:78.22:1666,78,0	0/0:31,0:31:93.32:0,93,2777	0/0:25,0:25:75.22:0,75,2241	0/0:40,0:40:99:0,120,3625	0/0:32,0:32:96.33:0,96,2942	1/1:1,16:17:51.16:1093,51,0	1/1:0,8:8:18.06:400,18,0	1/1:7,28:35:36.08:753,36,0	1/1:0,7:7:9.03:200,9,0	1/1:1,5:7:15.05:334,15,0	1/1:3,27:30:23.66:524,24,0	0/0:20,0:20:57.18:0,57,1643	0/0:34,0:34:99:0,102,3067	0/0:24,0:24:72.21:0,72,2052	0/0:12,0:12:33.11:0,33,1027
chr10	15861898	.	TG	T	1044.51	PASS	AB=0.909;AC=23;AF=0.411;AN=56;BaseQRankSum=-3.676;DP=435;FS=8.862;HRun=11;HaplotypeScore=77.1552;InbreedingCoeff=0.3068;MQ=80.83;MQ0=2;MQRankSum=1.959;QD=3.76;ReadPosRankSum=3.777;VQSLOD=-0.0037;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,9:17:32.89:268,33,0	0/0:4,0:4:5.95:0,6,50	0/1:48,2:30:27.56:28,0,152	0/1:38,0:16:13.86:14,0,42	0/1:14,4:18:6.68:7,0,127	0/1:9,1:10:28.06:28,0,124	0/0:18,0:18:27.05:0,27,279	0/0:16,0:16:9.91:0,10,43	1/1:3,10:13:8.05:114,8,0	0/1:13,1:14:9.61:10,0,109	0/1:6,1:7:6.60:7,0,139	1/1:3,4:8:16.01:107,16,0	0/0:11,0:15:22.99:0,23,122	0/0:7,0:9:14.27:0,14,74	1/1:6,8:15:30.78:233,31,0	1/1:8,5:13:17.94:148,18,0	0/1:13,2:15:22.29:22,0,169	1/1:7,6:13:14.95:123,15,0	0/0:19,0:23:39.56:0,40,199	0/0:6,0:8:16.79:0,17,79	0/0:15,0:15:8.67:0,9,38	0/0:13,0:17:19.64:0,20,95	0/0:6,0:7:11.35:0,11,57	0/0:15,0:17:22.66:0,23,112	1/1:5,2:9:10.04:61,10,0	0/1:14,2:16:52.46:52,0,106	0/1:18,2:20:16.30:16,0,217	0/0:8,0:8:14.86:0,15,131
chr10	15861908	.	G	GGA	2250.38	PASS	AB=0.549;AC=16;AF=0.286;AN=56;BaseQRankSum=-6.710;DP=485;FS=0.989;HRun=0;HaplotypeScore=92.5575;InbreedingCoeff=0.8518;MQ=73.46;MQ0=6;MQRankSum=-0.275;QD=18.30;ReadPosRankSum=0.568;VQSLOD=3.8522;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:71.37:0,71,534	0/0:4,0:4:9.02:0,9,107	0/0:62,0:27:34.41:0,34,364	0/0:53,0:21:20.11:0,20,188	0/0:19,0:19:44.67:0,45,424	0/0:10,0:10:26.67:0,27,279	0/0:15,0:15:39.06:0,39,451	1/1:4,15:20:33.73:434,34,0	0/0:16,0:16:38.75:0,39,294	0/0:15,0:15:36.02:0,36,374	0/0:8,0:8:24.03:0,24,273	0/0:13,0:14:39.49:0,39,267	1/1:6,7:13:19.50:224,19,0	1/1:3,3:6:11.51:186,12,0	0/0:18,0:19:50.63:0,51,374	0/0:13,0:13:35.74:0,36,259	0/0:17,0:17:44.84:0,45,423	0/0:14,0:14:35.37:0,35,253	1/1:9,12:24:57.03:688,57,0	1/1:5,2:12:23.69:240,24,0	0/1:2,1:13:1.30:72,0,1	1/1:5,7:15:17.73:268,18,0	1/1:3,0:5:3.37:57,3,0	0/1:3,10:15:1.83:275,0,2	0/0:12,0:13:37.67:0,38,286	0/0:17,0:17:38.87:0,39,366	0/0:19,0:19:53.91:0,54,528	0/0:8,0:8:21.77:0,22,205
chr10	15861926	.	CT	C	495.77	PASS	AB=0.870;AC=21;AF=0.375;AN=56;BaseQRankSum=2.468;DP=546;FS=6.253;HRun=16;HaplotypeScore=80.2647;InbreedingCoeff=0.2835;MQ=63.73;MQ0=15;MQRankSum=-0.802;QD=2.00;ReadPosRankSum=4.931;VQSLOD=-0.7297;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:19,10:30:25.44:150,25,0	0/0:6,0:7:8.80:0,9,59	0/0:62,0:21:5.64:0,6,27	0/0:53,2:18:4.69:0,5,43	0/0:23,1:24:10.98:0,11,173	0/0:11,1:12:10.62:0,11,64	0/0:17,1:19:11.71:0,12,184	0/1:18,1:16:6.89:7,0,78	1/1:11,4:16:10.63:59,11,0	0/0:22,0:23:23.86:0,24,185	0/0:8,2:10:12.39:0,12,91	0/1:9,6:17:5.74:76,0,6	0/0:14,0:13:5.59:0,6,65	0/1:6,0:6:11.91:12,0,14	1/1:9,9:18:11.52:72,12,0	0/1:4,8:15:8.49:60,0,8	0/1:14,4:18:9.61:10,0,156	1/1:9,8:17:13.51:77,14,0	0/1:18,1:19:0.09:0,0,95	0/0:16,1:15:14.89:0,15,109	0/1:11,0:10:11.27:11,0,19	0/1:14,1:14:2.56:3,0,83	0/0:7,0:8:5.84:0,6,39	0/1:22,1:22:6.01:6,0,62	1/1:6,9:15:4.59:107,5,0	0/0:19,0:19:14.93:0,15,115	0/0:25,1:24:41.66:0,42,313	1/1:5,1:6:2.77:18,3,0
chr10	15863946	.	TC	T	1555.83	PASS	AB=0.927;AC=43;AF=0.860;AN=50;BaseQRankSum=-3.270;DP=245;FS=7.751;HRun=5;HaplotypeScore=94.4437;InbreedingCoeff=0.0575;MQ=69.38;MQ0=0;MQRankSum=5.561;QD=6.65;ReadPosRankSum=3.125;VQSLOD=-0.0568;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:13:14.23:95,14,0	1/1:1,3:4:11.39:106,11,0	0/1:4,1:5:26.96:27,0,34	0/0:7,0:6:2.74:0,3,39	./.	1/1:4,0:4:10.08:37,10,0	1/1:8,1:9:13.37:85,13,0	1/1:19,2:20:17.68:164,18,0	1/1:8,2:10:23.87:153,24,0	./.	0/1:3,1:4:7.51:13,0,8	1/1:8,1:9:5.95:49,6,0	1/1:12,0:12:0.87:25,1,0	1/1:14,0:14:3.52:57,4,0	1/1:6,2:8:12.02:115,12,0	1/1:8,1:9:9.75:66,10,0	1/1:8,0:8:13:74,13,0	1/1:2,1:3:4.99:42,5,0	1/1:7,2:9:7.33:57,7,0	1/1:7,0:7:11.40:55,11,0	1/1:18,1:19:9.99:74,10,0	1/1:16,1:17:13.66:134,14,0	1/1:10,0:10:4.89:22,5,0	0/1:19,0:19:2.61:62,0,3	0/1:6,0:6:4:66,0,4	0/1:5,0:5:6.03:6,0,13	1/1:9,0:9:19.69:88,20,0	./.
chr10	15863952	.	T	TC	1775.38	PASS	AB=1.000;AC=44;AF=0.880;AN=50;BaseQRankSum=-1.940;DP=219;FS=5.510;HRun=5;HaplotypeScore=92.0825;InbreedingCoeff=0.4408;MQ=64.88;MQ0=0;MQRankSum=-1.051;QD=8.58;ReadPosRankSum=2.799;VQSLOD=0.3475;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:12,0:12:21.48:107,21,0	1/1:4,0:4:2.88:15,3,0	0/0:4,0:4:11.24:0,11,78	0/0:6,0:5:3.01:0,3,34	./.	1/1:4,0:4:11.63:65,12,0	1/1:6,0:6:12.97:65,13,0	1/1:17,0:16:27.99:114,28,0	1/1:9,0:9:17.25:91,17,0	./.	0/1:4,0:4:1.49:26,0,1	1/1:7,0:7:15.13:95,15,0	1/1:10,1:11:23.76:168,24,0	1/1:11,0:11:18.35:89,18,0	1/1:8,0:8:12.28:87,12,0	1/1:10,0:10:21.45:126,21,0	1/1:7,0:7:16.32:85,16,0	1/1:3,0:3:4.96:23,5,0	1/1:8,1:9:12.97:92,13,0	1/1:7,0:7:16.33:91,16,0	1/1:18,0:18:19.24:132,19,0	1/1:15,1:16:18.91:95,19,0	1/1:7,1:8:12.15:57,12,0	1/1:16,0:16:23.47:116,23,0	0/1:5,0:5:2.95:21,0,3	1/1:6,0:6:0.88:22,1,0	1/1:9,0:9:20.17:108,20,0	./.
chr10	15865662	.	C	CTT	6589.17	PASS	AB=0.621;AC=48;AF=0.857;AN=56;BaseQRankSum=-3.231;DP=600;FS=0.752;HRun=11;HaplotypeScore=105.7833;InbreedingCoeff=0.4004;MQ=69.53;MQ0=2;MQRankSum=-1.061;QD=11.56;ReadPosRankSum=2.914;VQSLOD=3.1605;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,0:31:40.44:162,40,0	1/1:0,10:10:27.09:391,27,0	0/0:15,0:14:22.24:0,22,174	0/0:13,0:11:11.71:0,12,111	1/1:7,12:20:29.62:279,30,0	1/1:3,12:17:30.10:419,30,0	1/1:13,12:28:34.18:651,34,0	1/1:8,0:15:18.81:73,19,0	1/1:5,1:22:27.96:129,28,0	1/1:8,6:23:47.39:435,47,0	1/1:3,8:11:23.98:281,24,0	1/1:6,1:19:23.47:134,23,0	0/1:9,0:31:5.05:78,0,5	1/1:4,0:23:2.18:71,2,0	1/1:7,2:27:5.49:137,5,0	1/1:4,0:27:47.41:163,47,0	1/1:9,23:35:59.17:784,59,0	0/1:4,0:19:1.14:58,0,1	1/1:7,0:22:13.32:130,13,0	1/1:5,2:25:37.19:219,37,0	1/1:3,0:12:12.48:43,12,0	1/1:3,0:17:29.87:123,30,0	0/1:15,2:24:12.63:238,0,13	1/1:4,0:27:40.81:183,41,0	0/1:7,0:21:20.73:68,0,21	1/1:9,18:28:24.49:609,24,0	1/1:5,17:25:47.72:574,48,0	1/1:4,3:11:15.43:157,15,0
chr10	15865726	.	CAG	C	273.55	PASS	AB=0.972;AC=17;AF=0.472;AN=36;BaseQRankSum=2.385;DP=440;FS=5.153;HRun=0;HaplotypeScore=72.4226;InbreedingCoeff=0.1769;MQ=60.20;MQ0=17;MQRankSum=-0.289;QD=1.42;ReadPosRankSum=0.441;VQSLOD=1.2261;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:21,0:20:14.19:14,0,34	./.	./.	./.	./.	0/0:17,0:17:2.99:0,3,24	1/1:16,1:21:8.69:60,9,0	./.	0/0:14,0:13:9.01:0,9,109	0/0:14,0:14:5.84:0,6,42	./.	0/1:17,0:17:22.91:23,0,36	1/1:9,0:9:2.94:18,3,0	1/1:7,0:7:2.80:13,3,0	0/1:15,1:15:25.78:26,0,37	0/0:19,0:19:5.71:0,6,48	1/1:25,1:25:14.15:113,14,0	0/1:10,1:11:16.80:17,0,96	0/0:11,0:10:3.01:0,3,36	./.	./.	./.	./.	1/1:22,0:21:2.70:14,3,0	0/1:23,0:22:0:0,0,0	0/0:15,0:15:0.89:0,1,2	1/1:17,2:19:9.02:95,9,0	0/0:10,0:10:0.47:0,0,1
chr10	15866066	.	AACTTACTT	A	15276.37	PASS	AB=1.000;AC=42;AF=0.750;AN=56;BaseQRankSum=-6.901;DP=676;FS=5.146;HRun=0;HaplotypeScore=198.9193;InbreedingCoeff=0.0236;MQ=73.73;MQ0=1;MQRankSum=-3.979;QD=23.91;ReadPosRankSum=4.490;VQSLOD=4.1437;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:39,1:40:30.74:1146,31,0	0/1:14,0:14:99:271,0,432	0/0:14,0:14:22.76:0,23,618	0/0:23,0:23:58.40:0,58,931	0/1:20,0:20:99:292,0,691	0/1:17,0:17:99:466,0,237	0/1:24,0:24:99:226,0,113	1/1:2,27:28:75.65:1116,76,0	1/1:25,0:25:60.58:552,61,0	0/1:29,0:29:99:397,0,964	0/1:13,0:13:99:270,0,196	1/1:29,0:29:67.75:709,68,0	1/1:1,19:20:18.06:496,18,0	1/1:0,23:23:30.10:830,30,0	1/1:36,0:36:97.69:1158,98,0	1/1:7,19:26:25.19:456,25,0	0/1:26,0:26:99:496,0,692	1/1:17,0:17:39.95:355,40,0	1/1:2,25:27:75.26:1638,75,0	1/1:1,19:20:48.11:868,48,0	1/1:3,40:43:2.96:59,3,0	1/1:0,22:22:59.97:995,60,0	1/1:2,14:16:25.62:617,26,0	1/1:3,17:20:9.03:210,9,0	1/1:20,0:20:37.08:573,37,0	0/1:29,0:29:99:497,0,556	0/1:35,0:35:99:430,0,1436	0/1:19,0:19:99:153,0,834
chr10	15866067	.	A	ACTTC	404.17	PASS	AB=0.969;AC=14;AF=0.250;AN=56;BaseQRankSum=-8.205;DP=676;FS=8.988;HRun=0;HaplotypeScore=208.1299;InbreedingCoeff=-0.0850;MQ=73.66;MQ0=1;MQRankSum=3.169;QD=1.27;ReadPosRankSum=-3.510;VQSLOD=1.1196;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:40,0:40:90.79:91,0,161	0/0:15,0:15:12.13:0,12,164	0/0:14,0:14:31.69:0,32,496	0/0:23,0:23:58.30:0,58,875	0/0:20,0:20:7.97:0,8,274	0/1:18,0:18:29.35:29,0,94	0/1:11,16:28:39.87:58,0,40	1/1:29,0:28:23.35:182,23,0	0/1:25,0:25:33.38:33,0,103	0/0:29,0:29:47.43:0,47,389	0/1:12,0:12:39.29:39,0,71	0/0:29,0:29:16.21:0,16,106	0/0:20,0:20:15.45:0,15,128	0/0:23,0:23:27.44:0,27,228	0/1:36,0:36:45.37:45,0,93	0/0:26,0:26:22.65:0,23,147	0/1:25,0:25:20.77:21,0,308	0/1:18,0:18:0.16:0,0,60	0/1:26,0:26:39.44:39,0,205	0/1:19,0:20:3.37:3,0,92	0/0:42,0:42:0:0,0,0	0/1:22,0:22:8.73:9,0,111	0/0:15,0:15:15.67:0,16,120	0/0:18,0:18:9:0,9,79	0/1:19,0:19:2.12:2,0,76	0/0:29,0:29:22.77:0,23,328	0/0:35,0:35:23.46:0,23,562	0/0:19,0:19:16.49:0,16,330
chr10	15866072	.	CTTA	C	4679.71	PASS	AB=0.971;AC=39;AF=0.696;AN=56;BaseQRankSum=3.269;DP=679;FS=17.861;HRun=0;HaplotypeScore=181.8402;InbreedingCoeff=0.0671;MQ=71.45;MQ0=1;MQRankSum=-2.351;QD=7.50;ReadPosRankSum=2.521;VQSLOD=3.3269;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:29,8:37:0.23:518,0,0	0/1:15,0:15:9.14:9,0,287	0/0:14,0:14:34.08:0,34,723	0/0:19,0:20:37.74:0,38,1087	0/0:21,0:21:13.67:0,14,448	0/1:17,1:18:71.33:71,0,180	0/1:27,0:27:25.70:26,0,115	1/1:28,0:27:7.73:105,8,0	1/1:15,12:27:11.58:575,12,0	0/1:30,0:30:33:33,0,595	0/1:13,0:13:3.20:3,0,163	1/1:16,17:33:57.51:700,58,0	1/1:19,0:19:17.77:118,18,0	1/1:23,0:23:29.66:199,30,0	1/1:30,11:41:22.55:673,23,0	1/1:20,4:24:4.20:226,4,0	0/1:26,0:26:43.97:44,0,403	0/1:13,5:18:14.86:307,0,15	1/1:25,0:25:63.48:337,63,0	1/1:20,0:20:8.10:96,8,0	1/1:40,0:40:0.89:2,1,0	0/1:22,0:22:57.73:79,0,58	1/1:14,0:14:14.81:112,15,0	1/1:18,0:17:8.77:54,9,0	1/1:16,6:22:13.09:319,13,0	0/1:29,0:29:47.48:47,0,359	0/1:36,0:36:4.15:4,0,859	0/1:18,1:19:20.66:21,0,495
chr10	15866460	.	A	ATGTGTG	7090.83	PASS	AB=1.000;AC=36;AF=0.643;AN=56;BaseQRankSum=-9.974;DP=795;FS=4.989;HRun=0;HaplotypeScore=227.1563;InbreedingCoeff=0.8152;MQ=51.51;MQ0=16;MQRankSum=4.732;QD=13.28;ReadPosRankSum=-1.948;VQSLOD=3.7211;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:21,5:46:21.07:314,21,0	1/1:4,0:14:14.28:191,14,0	0/1:22,0:3:0.36:0,0,1	0/0:35,0:6:14.98:0,15,257	1/1:14,0:21:35.88:380,36,0	1/1:13,0:19:32.28:363,32,0	1/1:26,1:39:65.70:708,66,0	1/1:30,0:29:5.41:50,5,0	1/1:5,24:33:25.02:622,25,0	1/1:13,0:42:75.14:739,75,0	1/1:7,0:14:8.94:94,9,0	0/0:17,0:43:67.05:0,67,925	0/0:34,0:34:37.88:0,38,666	0/0:35,0:35:29.31:0,29,312	1/1:5,17:28:10.75:220,11,0	1/1:8,12:23:24.08:733,24,0	1/1:22,0:39:78.50:890,78,0	1/1:8,9:19:11.76:326,12,0	0/0:17,0:14:8.94:0,9,100	0/0:16,0:16:5.80:0,6,55	0/1:51,0:51:0:0,0,0	0/0:29,0:29:3.29:0,3,43	0/0:19,0:19:5.56:0,6,53	0/0:33,0:33:8.52:0,9,57	1/1:14,2:31:11.14:287,11,0	1/1:23,0:32:62.86:660,63,0	1/1:15,0:21:32.15:322,32,0	1/1:1,0:7:15.05:193,15,0
chr10	15866478	.	GTGTGTGTGTT	G	5020.94	PASS	AB=0.667;AC=15;AF=0.278;AN=54;BaseQRankSum=-1.087;DP=840;FS=4.111;HRun=0;HaplotypeScore=271.8973;InbreedingCoeff=0.8109;MQ=56.39;MQ0=20;MQRankSum=-3.564;QD=23.03;ReadPosRankSum=1.410;VQSLOD=3.9117;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:60.42:0,60,1095	0/0:14,0:14:34.05:0,34,1039	0/0:53,0:22:48.52:0,49,716	0/0:49,0:19:51.05:0,51,1278	0/0:25,0:25:57.64:0,58,1373	0/0:19,0:19:42.09:0,42,1378	0/0:42,0:42:99:0,113,3231	1/1:10,28:36:90.73:1278,91,0	0/0:32,0:32:39.86:0,40,1113	0/0:40,0:39:99:0,111,3020	0/0:19,0:19:42.50:0,43,746	0/0:36,0:36:96.68:0,97,2522	1/1:3,31:34:12.78:1810,13,0	1/1:6,27:33:8.17:862,8,0	0/0:32,0:32:53.44:0,53,1064	0/0:24,0:24:53.23:0,53,1325	0/0:36,0:36:99:0,99,3545	0/0:19,0:19:22.95:0,23,604	0/1:8,8:12:56.21:339,0,56	1/1:1,17:18:8.96:215,9,0	./.	1/1:2,22:24:3.01:99,3,0	1/1:10,12:22:20.03:316,20,0	1/1:5,28:33:3.77:102,4,0	0/0:29,0:29:39.56:0,40,809	0/0:37,0:36:99:0,102,3199	0/0:20,0:20:49.04:0,49,1481	0/0:8,0:7:15.05:0,15,691
chr10	15866556	.	GC	G	6754.10	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=11.367;DP=686;FS=8.779;HRun=4;HaplotypeScore=74.5908;InbreedingCoeff=0.9842;MQ=67.93;MQ0=0;MQRankSum=0.817;QD=33.11;ReadPosRankSum=0.209;VQSLOD=5.0467;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,141,1954	1/1:1,9:10:27.08:324,27,0	0/0:17,0:15:45.14:0,45,601	0/0:21,0:21:51.38:0,51,824	1/1:1,22:23:66.20:792,66,0	1/1:1,20:21:51.16:612,51,0	1/1:2,29:31:87.27:1044,87,0	0/0:26,0:26:75.20:0,75,1012	0/0:27,0:27:81.27:0,81,1133	1/1:0,27:27:81.24:960,81,0	1/1:0,19:19:54.17:648,54,0	0/0:28,0:28:84.25:0,84,1153	0/0:20,0:20:39.13:0,39,546	0/0:33,0:33:75.25:0,75,1050	0/0:33,0:33:93.31:0,93,1302	0/0:28,0:28:78.26:0,78,1091	1/1:0,25:25:66.20:791,66,0	0/0:21,0:21:54.14:0,54,734	0/0:21,0:21:54.15:0,54,706	0/0:15,0:15:33.11:0,33,461	0/0:45,0:45:99:0,99,1386	0/0:22,0:22:51.17:0,51,713	0/0:23,0:23:63.21:0,63,882	0/0:32,0:31:57.19:0,57,798	0/0:21,0:21:60.20:0,60,840	1/1:0,28:28:78.24:935,78,0	1/1:0,18:18:48.15:576,48,0	1/1:0,2:2:6.02:72,6,0
chr10	15868029	.	CAT	C	7432.43	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=13.495;DP=697;FS=3.166;HRun=0;HaplotypeScore=88.4983;InbreedingCoeff=0.9515;MQ=76.42;MQ0=0;MQRankSum=-2.836;QD=38.12;ReadPosRankSum=4.114;VQSLOD=6.8283;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,41:41:99:1513,108,0	0/0:11,0:11:33.11:0,33,578	0/0:16,0:16:1.41:0,1,553	0/0:18,0:18:11.18:0,11,612	0/0:27,0:27:81.28:0,81,1444	0/0:28,0:28:84.29:0,84,1503	0/0:22,0:22:63.22:0,63,1135	0/0:37,0:37:99:0,111,1933	1/1:2,20:22:54.18:756,54,0	0/0:30,0:30:81.28:0,81,1456	0/0:18,0:18:51.17:0,51,918	1/1:0,29:29:87.29:1219,87,0	0/0:22,0:22:66.23:0,66,1181	0/0:24,0:24:57.20:0,57,1021	1/1:0,36:36:99:1387,99,0	1/1:0,24:25:75.25:1050,75,0	0/0:30,0:29:87.30:0,87,1566	1/1:1,21:22:57.19:794,57,0	0/0:21,0:21:60.20:0,60,1051	0/0:22,0:22:60.21:0,60,1073	0/0:35,0:35:96.31:0,96,1683	0/0:20,0:20:60.21:0,60,1080	0/0:26,0:26:75.26:0,75,1338	0/0:27,0:27:78.27:0,78,1397	1/1:2,18:20:51.17:714,51,0	0/0:35,0:35:93.32:0,93,1669	0/0:28,0:27:78.27:0,78,1391	0/0:5,0:5:15.05:0,15,270
chr10	15869353	.	G	GATGATA	16083.87	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=1.612;DP=701;FS=9.764;HRun=0;HaplotypeScore=133.1769;InbreedingCoeff=0.7060;MQ=63.96;MQ0=0;MQRankSum=-5.182;QD=24.44;ReadPosRankSum=3.642;VQSLOD=4.0619;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,20:28:30.09:955,30,0	1/1:0,0:12:20.69:197,21,0	0/0:22,0:19:57.01:0,57,537	0/0:21,0:19:33.54:0,34,455	1/1:6,0:26:18.35:613,18,0	1/1:3,0:27:15.05:432,15,0	1/1:25,0:25:54.11:493,54,0	1/1:43,0:43:99:1338,123,0	1/1:2,24:28:42.14:1453,42,0	1/1:33,0:34:95.15:1084,95,0	1/1:2,0:11:8.96:191,9,0	1/1:3,22:29:42.14:1374,42,0	1/1:1,0:35:24.08:608,24,0	1/1:0,0:23:12.04:305,12,0	1/1:4,28:34:29.99:1006,30,0	1/1:2,20:27:24.08:775,24,0	1/1:5,0:27:20.52:347,21,0	1/1:3,17:21:9.03:317,9,0	1/1:12,0:12:27.83:220,28,0	1/1:0,0:28:34.90:556,35,0	1/1:1,0:22:6.02:146,6,0	1/1:0,0:25:23.67:360,24,0	1/1:1,0:18:3.01:76,3,0	1/1:0,0:22:6.49:88,6,0	1/1:4,23:29:53.84:1816,54,0	1/1:3,0:26:54.09:957,54,0	1/1:1,0:28:14.53:293,15,0	1/1:1,3:16:3.01:86,3,0
chr10	15869357	.	A	ATG	2329.84	PASS	AB=0.951;AC=39;AF=0.696;AN=56;BaseQRankSum=11.563;DP=553;FS=1.416;HRun=0;HaplotypeScore=124.6972;InbreedingCoeff=-0.0383;MQ=68.70;MQ0=0;MQRankSum=-9.920;QD=4.86;ReadPosRankSum=2.848;VQSLOD=3.0944;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:22:11.92:41,12,0	0/1:12,0:12:60.08:70,0,60	0/0:22,0:20:57.19:0,57,834	0/0:20,0:18:53.91:0,54,717	1/1:10,0:10:10.78:158,11,0	0/1:22,0:22:27.93:102,0,28	0/1:15,9:24:99:361,0,500	0/0:32,0:32:55.93:0,56,1177	1/1:26,0:26:7.86:68,8,0	0/1:24,5:29:99:467,0,470	1/1:10,0:10:8.73:61,9,0	1/1:27,0:27:26.23:84,26,0	1/1:25,0:25:23.64:184,24,0	1/1:16,0:16:12:106,12,0	1/1:29,0:29:15.29:48,15,0	0/1:25,0:25:25.43:25,0,27	0/1:23,1:23:75.97:76,0,94	1/1:15,0:15:4.93:14,5,0	0/1:10,1:11:18.91:19,0,273	0/1:18,0:18:99:139,0,176	1/1:14,0:14:3.01:33,3,0	1/1:14,0:14:19.02:112,19,0	1/1:8,0:8:3:25,3,0	1/1:21,0:21:2.06:43,2,0	0/1:25,0:25:29.27:68,0,29	0/1:16,0:15:99:113,0,189	0/1:21,0:21:34.79:59,0,35	1/1:15,0:15:3:25,3,0
chr10	15870892	.	TTCTCTCTCTCTCTCTCTC	T	438.91	PASS	AC=8;AF=0.167;AN=48;BaseQRankSum=-1.357;DP=448;FS=6.118;HRun=0;HaplotypeScore=217.1681;InbreedingCoeff=0.6447;MQ=61.61;MQ0=12;MQRankSum=-0.124;QD=7.57;ReadPosRankSum=0.903;VQSLOD=2.1800;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:16:2.99:23,3,0	0/0:14,0:14:12.03:0,12,220	./.	0/0:17,0:7:5.76:0,6,33	0/0:15,0:15:18.06:0,18,847	0/0:12,0:12:15.52:0,16,664	0/0:20,0:21:19.23:0,19,730	0/0:23,0:23:26.12:0,26,686	1/1:13,0:14:3.01:123,3,0	0/0:20,0:20:30.10:0,30,1564	0/0:15,0:16:15.05:0,15,759	./.	0/0:5,0:5:3.01:0,3,159	0/0:18,0:16:19.42:0,19,682	1/1:12,0:15:5.86:50,6,0	./.	0/0:28,0:26:36.12:0,36,1405	1/1:9,1:11:13.85:368,14,0	0/0:24,0:26:26.30:0,26,687	0/0:13,0:12:3.01:0,3,125	0/0:14,0:14:2.98:0,3,21	0/0:8,0:8:12.03:0,12,328	0/0:23,0:23:25.80:0,26,1092	0/0:15,0:14:6.46:0,6,162	./.	0/0:15,0:16:24.88:0,25,855	0/0:21,0:20:27.09:0,27,776	0/0:26,0:25:45.15:0,45,1921
chr10	15870964	.	CGCGCGCGCGCGCGCGCGCGCGCGT	C	4912.88	PASS	AB=0.908;AC=24;AF=0.632;AN=38;BaseQRankSum=0.746;DP=386;FS=10.017;HRun=0;HaplotypeScore=153.4669;InbreedingCoeff=0.2128;MQ=36.64;MQ0=19;MQRankSum=-0.615;QD=22.43;ReadPosRankSum=1.417;VQSLOD=2.6787;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	1/1:10,0:10:15.05:551,15,0	./.	0/0:5,0:3:3.01:0,3,71	0/0:16,0:16:3:0,3,35	1/1:21,0:21:3.01:191,3,0	./.	0/0:4,0:3:0.89:0,1,2	./.	0/1:10,8:17:8.54:647,0,9	0/0:7,2:9:3:0,3,30	0/1:6,0:6:38.22:38,0,202	1/1:10,11:20:12.51:633,13,0	1/1:15,1:15:6.02:255,6,0	./.	1/1:13,0:13:3.37:17,3,0	1/1:13,16:27:6.77:200,7,0	0/1:10,0:9:12.04:12,0,124	1/1:9,11:19:30.27:1240,30,0	./.	./.	./.	1/1:10,0:10:0.86:3,1,0	1/1:10,1:9:0.67:2,1,0	./.	0/1:15,1:16:2.83:755,0,3	1/1:12,6:17:9.97:369,10,0	0/0:7,0:6:2.91:0,3,17
chr10	15870966	.	CGCGCGCGCGCGCGCGCGCGCGT	C	4810.48	PASS	AB=1.000;AC=29;AF=0.763;AN=38;BaseQRankSum=1.487;DP=404;FS=10.176;HRun=0;HaplotypeScore=142.3655;InbreedingCoeff=0.3092;MQ=38.89;MQ0=19;MQRankSum=-0.597;QD=19.72;ReadPosRankSum=0.738;VQSLOD=3.3809;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	1/1:10,0:10:15.05:559,15,0	1/1:1,0:1:1.25:3,1,0	0/0:6,0:4:5.04:0,5,70	0/0:8,8:16:2.98:0,3,23	1/1:6,15:21:2.88:173,3,0	./.	0/0:4,0:3:0.47:0,0,1	./.	1/1:15,1:15:12.98:630,13,0	0/1:9,0:9:0:0,0,0	0/1:6,0:6:75.56:76,0,149	1/1:20,1:20:12.51:597,13,0	1/1:23,0:22:6.02:231,6,0	./.	1/1:14,0:14:3.01:35,3,0	1/1:28,0:26:6.47:200,6,0	0/1:11,0:10:11.98:12,0,82	1/1:19,1:19:33.02:1213,33,0	./.	./.	./.	1/1:9,0:9:0.86:3,1,0	1/1:20,0:18:0.67:2,1,0	./.	1/1:18,0:18:18.06:731,18,0	1/1:16,1:17:9.97:347,10,0	./.
chr10	15870968	.	CGCGCGCGCGCGCGCGCGCGT	C	4630.44	PASS	AB=1.000;AC=28;AF=0.778;AN=36;BaseQRankSum=1.071;DP=404;FS=3.927;HRun=0;HaplotypeScore=138.3873;InbreedingCoeff=0.3000;MQ=41.37;MQ0=17;MQRankSum=0.440;QD=19.70;ReadPosRankSum=0.620;VQSLOD=3.4557;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	1/1:10,0:10:15.05:572,15,0	1/1:1,0:1:1.55:4,2,0	0/0:7,0:5:5.83:0,6,98	0/0:15,0:15:2.90:0,3,16	1/1:21,0:21:3.01:154,3,0	./.	0/0:4,0:3:0:0,0,0	./.	1/1:14,0:13:14.73:575,15,0	./.	0/1:6,0:6:96.72:118,0,97	1/1:21,0:20:12.04:541,12,0	1/1:9,14:22:6.02:210,6,0	./.	1/1:13,0:13:3.01:54,3,0	1/1:28,0:26:6.63:203,7,0	0/1:13,0:12:12.59:13,0,45	1/1:19,0:18:34.17:1154,34,0	./.	./.	./.	1/1:9,0:9:0.86:3,1,0	1/1:7,13:18:0.37:1,0,0	./.	1/1:10,10:20:21:713,21,0	1/1:17,0:17:9.50:316,10,0	./.
chr10	15870972	.	CGCGCGCGCGCGCGCGT	C	4235.15	PASS	AB=0.857;AC=29;AF=0.906;AN=32;BaseQRankSum=1.053;DP=340;FS=2.658;HRun=0;HaplotypeScore=120.7863;InbreedingCoeff=0.2990;MQ=49.98;MQ0=14;MQRankSum=-0.826;QD=21.28;ReadPosRankSum=0.794;VQSLOD=3.6234;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	1/1:10,0:10:15.05:588,15,0	1/1:1,0:1:1.82:5,2,0	0/0:11,0:9:6.05:0,6,91	./.	1/1:20,0:20:3.01:118,3,0	./.	./.	./.	1/1:11,0:11:15.51:479,16,0	./.	0/1:5,1:6:7.47:222,0,7	1/1:17,1:17:11.97:431,12,0	1/1:20,0:19:5.99:150,6,0	./.	1/1:2,11:13:3.01:92,3,0	1/1:23,0:21:6.02:211,6,0	1/1:5,8:12:2.94:21,3,0	1/1:14,0:13:35.96:1029,36,0	./.	./.	./.	1/1:7,0:7:1.11:3,1,0	1/1:17,0:17:0.34:1,0,0	./.	1/1:12,1:13:20.99:638,21,0	1/1:13,0:13:9.37:247,9,0	./.
chr10	15870974	.	CGCGCGCGCGCGCGT	C	3922.44	PASS	AB=1.000;AC=29;AF=0.906;AN=32;BaseQRankSum=1.118;DP=316;FS=2.658;HRun=0;HaplotypeScore=106.8305;InbreedingCoeff=0.3253;MQ=51.06;MQ0=13;MQRankSum=-0.956;QD=21.32;ReadPosRankSum=0.697;VQSLOD=2.4679;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	1/1:5,2:7:15.05:568,15,0	1/1:1,0:1:1.55:4,2,0	0/0:11,0:9:5.74:0,6,71	./.	1/1:19,0:19:3.01:102,3,0	./.	./.	./.	1/1:10,0:10:15.52:448,16,0	./.	0/1:6,0:6:2.93:208,0,3	1/1:16,0:15:12.51:379,13,0	1/1:20,0:19:5.99:131,6,0	./.	1/1:11,0:11:3.01:73,3,0	1/1:23,0:21:6.02:216,6,0	1/1:13,0:12:2.98:21,3,0	1/1:13,0:12:35.96:958,36,0	./.	./.	./.	1/1:4,1:5:1.10:3,1,0	1/1:17,0:17:0.34:1,0,0	./.	1/1:13,0:13:20.99:582,21,0	1/1:10,0:10:9.76:228,10,0	./.
chr10	15870976	.	CGCGCGCGCGCGT	C	3567.09	PASS	AB=0.857;AC=29;AF=0.806;AN=36;BaseQRankSum=1.280;DP=302;FS=2.660;HRun=0;HaplotypeScore=100.7038;InbreedingCoeff=0.3691;MQ=51.91;MQ0=11;MQRankSum=-0.405;QD=19.93;ReadPosRankSum=0.632;VQSLOD=2.4865;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	1/1:3,3:6:15.05:525,15,0	1/1:2,0:1:0.89:2,1,0	0/0:11,0:9:5.74:0,6,47	0/0:11,1:12:0:0,0,0	1/1:17,2:19:2.85:86,3,0	./.	./.	./.	1/1:9,1:10:15.52:426,16,0	0/0:2,1:3:0:0,0,0	0/1:5,1:6:1.76:195,0,2	1/1:15,1:15:12.51:331,13,0	1/1:18,0:18:5.99:114,6,0	./.	1/1:11,0:11:3.01:54,3,0	1/1:20,3:21:6.02:217,6,0	1/1:13,0:12:2.98:21,3,0	1/1:13,0:12:35.96:851,36,0	./.	./.	./.	1/1:3,2:5:1.25:3,1,0	1/1:15,2:17:0.34:1,0,0	./.	1/1:12,0:12:20.99:529,21,0	1/1:7,1:8:9.29:212,9,0	./.
chr10	15872531	.	TTGTGTGTGTGTGTGTG	T	4856.31	PASS	AB=0.737;AC=23;AF=0.411;AN=56;BaseQRankSum=8.076;DP=604;FS=23.245;HRun=0;HaplotypeScore=249.7190;InbreedingCoeff=0.1709;MQ=61.91;MQ0=14;MQRankSum=-7.020;QD=15.13;ReadPosRankSum=0.937;VQSLOD=1.9046;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:23:30.10:0,30,1437	0/1:4,0:7:13.15:138,0,13	0/0:36,0:12:3.90:0,4,81	0/0:39,0:19:6.02:0,6,132	0/1:5,0:10:30.35:39,0,30	0/1:9,1:18:15.85:283,0,16	0/1:17,0:20:18.41:66,0,18	0/1:25,6:31:33.51:193,0,34	0/0:14,0:19:30.09:0,30,1516	0/1:16,1:28:99:448,0,128	0/0:9,0:12:5.99:0,6,50	0/0:9,0:14:15.05:0,15,417	1/1:14,8:21:11.93:430,12,0	1/1:10,12:22:15.05:658,15,0	0/0:17,0:26:53.85:0,54,2746	0/0:17,0:24:48.16:0,48,2539	0/1:15,1:21:61.67:393,0,62	0/0:21,0:25:45.09:0,45,1953	1/1:9,2:11:1.78:257,2,0	1/1:16,7:23:24.03:638,24,0	0/0:38,9:47:0.47:0,0,1	1/1:14,7:22:17.93:435,18,0	1/1:16,2:18:2.90:132,3,0	1/1:14,12:26:5.98:152,6,0	0/0:9,0:11:15.05:0,15,929	0/1:16,0:24:57.79:331,0,58	0/1:9,0:17:56.29:264,0,56	0/0:5,0:5:2.98:0,3,22
chr10	15873531	.	T	TAAA	9299.42	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-4.521;DP=621;FS=2.206;HRun=12;HaplotypeScore=109.6471;InbreedingCoeff=0.8239;MQ=69.65;MQ0=1;MQRankSum=-3.199;QD=15.76;ReadPosRankSum=-0.509;VQSLOD=3.5006;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:12,22:38:9.27:589,9,0	1/1:0,0:5:8.93:65,9,0	0/0:15,0:13:24.93:0,25,183	0/0:16,0:15:14.19:0,14,130	1/1:9,0:36:70.71:483,71,0	1/1:5,0:20:37.08:274,37,0	1/1:6,0:19:41.81:317,42,0	1/1:24,0:28:48.12:660,48,0	1/1:5,12:19:39.01:567,39,0	1/1:10,0:30:58.06:449,58,0	1/1:7,0:28:56.14:423,56,0	1/1:2,13:17:17.07:249,17,0	1/1:3,1:15:9:104,9,0	1/1:1,9:11:8.99:102,9,0	1/1:9,19:29:21.07:350,21,0	1/1:8,12:21:18.53:331,19,0	1/1:4,0:27:34.13:258,34,0	1/1:1,18:24:30:419,30,0	1/1:9,8:20:33.01:381,33,0	1/1:9,1:25:51.08:620,51,0	1/1:2,9:13:6.02:94,6,0	1/1:16,1:31:52.80:549,53,0	1/1:8,11:23:21.19:278,21,0	1/1:10,3:24:24.98:345,25,0	1/1:6,12:20:31.57:455,32,0	1/1:7,0:28:62.36:539,62,0	1/1:5,0:25:29.86:228,30,0	1/1:5,1:12:17.95:169,18,0
chr10	15874060	.	A	AAAG	5175.67	PASS	AB=0.944;AC=15;AF=0.268;AN=56;BaseQRankSum=0.413;DP=509;FS=1.517;HRun=0;HaplotypeScore=189.5471;InbreedingCoeff=0.8982;MQ=66.07;MQ0=1;MQRankSum=-4.688;QD=32.76;ReadPosRankSum=1.250;VQSLOD=5.0894;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,14:14:24.55:493,25,0	0/0:12,0:12:33.08:0,33,473	0/1:32,0:22:49.81:50,0,518	0/0:46,0:28:13.76:0,14,527	0/0:14,0:14:32.74:0,33,423	0/0:20,0:20:33.08:0,33,598	0/0:18,0:18:45.10:0,45,668	0/0:23,0:23:48.15:0,48,703	1/1:5,9:14:27.09:557,27,0	0/0:25,0:25:71.73:0,72,1087	0/0:20,0:20:46.31:0,46,799	1/1:5,12:17:42.14:827,42,0	0/0:16,0:15:25.73:0,26,482	0/0:12,0:12:33.09:0,33,487	1/1:6,17:23:45.85:839,46,0	1/1:4,14:18:33.11:683,33,0	0/0:11,0:10:24.08:0,24,370	1/1:7,10:16:32.92:660,33,0	0/0:9,0:9:24.08:0,24,366	0/0:19,0:19:48.09:0,48,675	0/0:16,0:16:39.13:0,39,600	0/0:19,0:19:45.11:0,45,658	0/0:14,0:14:24.19:0,24,412	0/0:21,0:20:57.19:0,57,870	1/1:3,16:19:51.65:1067,52,0	0/0:18,0:18:48.16:0,48,736	0/0:13,0:13:33.08:0,33,487	0/0:4,0:4:12.02:0,12,161
chr10	15874094	.	AAGG	A	7046.95	PASS	AB=0.723;AC=28;AF=0.500;AN=56;BaseQRankSum=4.016;DP=519;FS=0.455;HRun=0;HaplotypeScore=211.4085;InbreedingCoeff=-0.6773;MQ=43.40;MQ0=13;MQRankSum=0.132;QD=16.46;ReadPosRankSum=6.077;VQSLOD=4.4054;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:8,4:10:75.79:118,0,76	0/1:9,8:17:99:313,0,198	0/0:40,0:15:21.48:0,21,279	0/0:48,0:22:16.59:0,17,536	0/1:9,6:14:89.41:158,0,89	0/1:7,11:18:68.50:450,0,68	0/1:11,5:16:99:271,0,131	0/1:20,4:23:99:197,0,242	0/1:10,2:12:40.30:71,0,40	0/1:11,18:29:99:739,0,140	1/1:7,8:15:36.06:457,36,0	0/1:11,8:19:99:340,0,124	0/1:18,5:22:99:263,0,186	0/1:11,4:15:99:138,0,147	0/1:21,8:28:99:355,0,310	0/1:12,7:19:99:321,0,252	0/1:7,3:10:46.63:111,0,47	0/1:9,4:12:99:192,0,114	0/1:6,5:10:35.55:205,0,36	0/1:8,5:12:8.70:293,0,9	0/1:12,2:14:27.31:96,0,27	0/1:7,8:14:17.87:310,0,18	0/1:7,10:16:1.14:338,0,1	1/1:14,3:16:17.96:195,18,0	0/1:4,13:17:35.21:412,0,35	0/1:6,10:15:36.56:341,0,37	0/1:14,5:19:99:301,0,191	0/1:1,2:3:40.96:62,0,41
chr10	15874117	.	G	GAA	4696.95	PASS	AB=0.983;AC=28;AF=0.500;AN=56;BaseQRankSum=9.652;DP=461;FS=20.500;HRun=1;HaplotypeScore=204.4659;InbreedingCoeff=-0.7087;MQ=34.53;MQ0=17;MQRankSum=-3.169;QD=11.74;ReadPosRankSum=0.275;VQSLOD=-0.0785;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:11,0:8:64.64:65,0,102	0/1:17,0:17:99:341,0,227	0/0:27,0:7:18.03:0,18,250	0/0:33,0:10:30.05:0,30,413	0/1:15,0:14:99:118,0,125	0/1:19,0:18:99:270,0,105	0/1:15,0:15:99:109,0,221	0/1:21,0:20:5.59:6,0,256	0/1:19,0:19:65.31:69,0,65	0/1:27,0:27:99:475,0,229	1/1:10,0:10:26.03:331,26,0	0/1:18,1:19:99:238,0,367	0/1:19,0:18:99:151,0,299	0/1:10,0:10:99:128,0,218	0/1:28,1:28:99:264,0,547	0/1:18,1:20:99:248,0,471	0/1:10,0:9:69.47:69,0,75	0/1:12,1:12:99:103,0,201	0/1:12,0:11:99:136,0,126	0/1:11,0:11:33:180,0,33	1/1:9,1:8:7.70:67,8,0	0/1:9,0:8:15.49:230,0,15	0/1:14,2:15:50.42:299,0,50	0/1:13,0:11:47.14:102,0,47	0/1:18,0:17:99:300,0,155	0/1:14,0:12:73.69:193,0,74	0/1:15,2:17:99:176,0,270	0/1:6,0:6:28.47:28,0,51
chr10	15874119	.	AG	A	4668.50	PASS	AB=0.731;AC=30;AF=0.536;AN=56;BaseQRankSum=7.738;DP=457;FS=11.298;HRun=2;HaplotypeScore=196.7969;InbreedingCoeff=-0.6186;MQ=34.23;MQ0=15;MQRankSum=-2.269;QD=11.64;ReadPosRankSum=-0.840;VQSLOD=1.9318;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:7,5:9:34.04:34,0,87	0/1:8,10:18:31.79:330,0,32	0/0:23,0:6:18.05:0,18,229	0/0:31,0:9:24.05:0,24,331	0/1:7,8:14:26.02:115,0,26	0/1:9,10:18:59.58:291,0,60	0/1:9,6:15:64.62:161,0,65	0/1:17,3:19:73.17:73,0,152	1/1:17,2:19:2.74:63,3,0	0/1:9,17:26:76.77:539,0,77	1/1:1,8:9:27.04:292,27,0	0/1:13,8:21:64.24:235,0,64	0/1:16,4:17:55.81:129,0,56	0/1:6,4:10:27.98:106,0,28	0/1:23,6:28:95.99:237,0,96	0/1:14,6:20:99:224,0,157	0/1:9,2:9:11.32:102,0,11	0/1:10,3:12:5.53:138,0,6	0/1:6,6:11:89.54:203,0,90	0/1:5,5:10:24.42:157,0,24	1/1:7,3:8:2.26:73,2,0	1/1:2,7:8:1.10:189,1,0	0/1:7,7:12:21.62:269,0,22	0/1:7,6:11:4.60:72,0,5	0/1:10,9:17:98.92:229,0,99	0/1:7,7:12:26.37:199,0,26	0/1:12,4:16:75.58:158,0,76	0/1:6,1:7:18.21:46,0,18
chr10	15874120	.	GGAAGAA	G	5121.12	PASS	AB=0.979;AC=40;AF=0.714;AN=56;BaseQRankSum=-6.592;DP=441;FS=23.478;HRun=0;HaplotypeScore=217.4797;InbreedingCoeff=0.2998;MQ=34.45;MQ0=16;MQRankSum=-0.109;QD=14.76;ReadPosRankSum=0.712;VQSLOD=2.3476;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:13,0:10:11.45:41,0,11	1/1:18,0:18:16.11:345,16,0	0/0:25,0:6:14.97:0,15,174	0/0:28,0:8:17.85:0,18,301	1/1:15,0:14:0.98:60,1,0	0/1:18,0:18:41.52:111,0,42	1/1:15,0:15:17.71:284,18,0	1/1:4,0:17:26.98:367,27,0	1/1:2,17:19:5.51:133,6,0	1/1:25,0:25:7.80:297,8,0	0/0:9,0:9:1.89:0,2,3	1/1:19,2:21:17.27:457,17,0	1/1:20,0:17:4.83:414,5,0	1/1:10,0:10:13.82:280,14,0	1/1:19,8:26:33.93:773,34,0	1/1:18,3:21:25.85:466,26,0	1/1:10,0:8:4.72:97,5,0	0/1:10,1:11:30.42:255,0,30	0/1:12,0:11:30.91:31,0,100	1/1:8,0:8:2.15:16,2,0	0/0:9,0:7:4.99:0,5,18	0/0:9,0:8:1.41:0,1,3	0/0:14,0:12:3.19:0,3,6	1/1:15,0:10:5.11:115,5,0	1/1:16,0:14:0.85:87,1,0	1/1:11,0:10:5.10:75,5,0	1/1:15,0:15:17:360,17,0	1/1:8,0:7:2.99:57,3,0
chr10	15874121	.	GA	G	2444.81	PASS	AB=0.946;AC=39;AF=0.696;AN=56;BaseQRankSum=8.190;DP=444;FS=6.243;HRun=2;HaplotypeScore=200.5995;InbreedingCoeff=-0.1405;MQ=34.48;MQ0=17;MQRankSum=-2.926;QD=6.24;ReadPosRankSum=2.915;VQSLOD=0.8377;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:13,0:10:9.47:9,0,48	1/1:14,4:18:14.90:200,15,0	0/0:24,1:6:18:0,18,211	0/0:27,0:8:21.07:0,21,309	1/1:14,1:14:0.44:54,0,0	0/1:17,2:18:21.69:117,0,22	1/1:11,4:15:2.10:86,2,0	0/1:17,0:17:27.43:38,0,27	1/1:19,0:19:7.43:37,7,0	1/1:22,3:25:17.83:301,18,0	1/1:9,0:9:24.16:126,24,0	0/1:21,0:21:34.66:128,0,35	1/1:13,7:17:0.50:124,1,0	0/1:8,2:10:3.17:97,0,3	0/1:27,0:26:62.41:124,0,62	0/1:21,0:21:99:123,0,128	1/1:7,2:7:7.78:89,8,0	1/1:13,0:12:3.98:82,4,0	0/1:14,0:12:73.14:87,0,73	0/1:8,0:8:17.87:63,0,18	1/1:7,2:7:8.39:61,8,0	1/1:9,0:8:17.12:100,17,0	1/1:14,0:12:8.41:122,8,0	1/1:13,2:10:8.34:51,8,0	0/1:16,0:14:90.13:103,0,90	0/1:12,0:10:0.09:96,0,0	0/1:11,5:16:3.59:165,0,4	0/1:6,2:7:8.97:18,0,9
chr10	15874124	.	GAAGAA	G	1909.87	PASS	AB=0.900;AC=19;AF=0.339;AN=56;BaseQRankSum=-8.448;DP=442;FS=39.473;HRun=0;HaplotypeScore=222.3853;InbreedingCoeff=-0.4281;MQ=34.67;MQ0=18;MQRankSum=-0.393;QD=6.28;ReadPosRankSum=5.564;VQSLOD=1.4288;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:10:5.50:0,5,90	0/1:15,3:18:99:161,0,125	0/0:25,0:6:15.05:0,15,328	0/0:22,0:7:21.05:0,21,515	0/1:15,1:15:25.20:25,0,77	0/1:17,2:18:37.83:38,0,174	0/1:12,3:15:58.46:128,0,58	1/1:18,0:17:0.90:181,1,0	0/1:19,0:19:10.19:47,0,10	0/1:23,3:26:99:136,0,204	0/0:9,0:9:18.04:0,18,118	0/1:21,0:21:99:144,0,143	0/1:14,7:18:61.94:247,0,62	0/1:9,2:11:24.61:160,0,25	0/1:27,0:26:99:241,0,165	0/1:21,0:21:96.66:97,0,180	0/1:7,2:7:34.15:50,0,34	0/1:13,0:12:87.54:88,0,145	0/0:14,0:12:4.19:0,4,236	0/0:8,0:8:12.26:0,12,73	0/0:6,2:6:11.69:0,12,57	0/0:9,0:8:12.14:0,12,80	0/0:14,0:12:25.04:0,25,170	0/1:13,2:10:32.31:63,0,32	0/0:16,0:14:11.18:0,11,163	0/1:11,0:9:17.08:17,0,82	0/1:11,5:16:98.39:214,0,98	0/1:6,2:7:19.12:32,0,19
chr10	15874226	.	GAC	G	4061.76	PASS	AB=1.000;AC=49;AF=0.980;AN=50;BaseQRankSum=0.810;DP=159;FS=0.000;HRun=0;HaplotypeScore=126.2186;InbreedingCoeff=0.1574;MQ=27.98;MQ0=1;MQRankSum=-1.065;QD=25.87;ReadPosRankSum=1.700;VQSLOD=4.7700;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,0:2:3.01:42,3,0	1/1:7,0:7:21.07:274,21,0	./.	./.	0/1:7,0:6:0:0,0,0	1/1:5,3:11:20.98:267,21,0	1/1:6,0:7:12.03:143,12,0	./.	1/1:4,0:4:12.04:163,12,0	1/1:6,0:6:18.06:225,18,0	1/1:6,0:7:12.04:158,12,0	1/1:2,0:2:6.02:72,6,0	1/1:10,1:12:21.07:294,21,0	1/1:6,0:6:18.06:251,18,0	1/1:2,0:2:6.02:83,6,0	1/1:1,0:1:3.01:41,3,0	1/1:9,0:9:23.66:258,24,0	1/1:3,5:8:15.05:201,15,0	1/1:7,1:7:21.01:257,21,0	1/1:3,1:6:11.93:140,12,0	1/1:6,1:8:10.27:115,10,0	1/1:2,2:5:9.50:123,10,0	1/1:3,0:3:4.26:43,4,0	1/1:8,0:9:11.06:167,11,0	1/1:5,0:5:14.96:183,15,0	1/1:10,0:8:23.99:287,24,0	1/1:6,0:6:9.03:115,9,0	1/1:4,0:4:12.04:160,12,0
chr10	15874227	.	ACAAAAAGCAGC	A	9553.27	PASS	AB=0.500;AC=49;AF=0.980;AN=50;BaseQRankSum=-1.700;DP=154;FS=7.949;HRun=0;HaplotypeScore=124.6437;InbreedingCoeff=0.1526;MQ=27.99;MQ0=1;MQRankSum=1.224;QD=62.85;ReadPosRankSum=1.669;VQSLOD=4.0919;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,2:2:3.01:94,3,0	1/1:1,5:7:21.07:654,21,0	./.	./.	0/1:0,6:6:0:0,0,0	1/1:6,3:10:21.07:569,21,0	1/1:1,6:7:12.04:360,12,0	./.	1/1:0,4:4:12.04:380,12,0	1/1:0,6:6:18.06:594,18,0	1/1:1,6:7:12.04:357,12,0	1/1:0,2:2:6.02:186,6,0	1/1:2,5:8:21.07:644,21,0	1/1:0,3:6:18.06:551,18,0	1/1:0,2:2:6.02:190,6,0	1/1:0,1:1:3.01:96,3,0	1/1:2,7:9:13.90:627,14,0	1/1:5,3:8:15.05:489,15,0	1/1:2,5:7:21.07:598,21,0	1/1:4,3:6:11.78:291,12,0	1/1:3,4:8:9.02:210,9,0	1/1:3,2:5:9.92:278,10,0	1/1:0,2:3:3.48:105,3,0	1/1:3,6:9:12.51:370,13,0	1/1:0,4:5:15.05:450,15,0	1/1:0,7:8:24.08:769,24,0	1/1:0,6:6:9.03:301,9,0	1/1:0,4:4:12.04:389,12,0
chr10	15874260	.	AGCAGCG	A	5415.89	PASS	AC=50;AF=0.962;AN=52;BaseQRankSum=1.987;DP=228;FS=0.000;HRun=0;HaplotypeScore=151.8500;InbreedingCoeff=0.2947;MQ=31.70;MQ0=2;MQRankSum=-1.171;QD=25.67;ReadPosRankSum=-0.262;VQSLOD=4.1831;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,2:3:3.48:54,3,0	1/1:2,6:8:18.53:318,19,0	./.	0/0:2,0:1:3.01:0,3,76	./.	1/1:5,4:9:12.85:151,13,0	1/1:9,6:14:24.36:285,24,0	1/1:1,12:13:23.96:354,24,0	1/1:1,4:5:15:236,15,0	1/1:8,6:14:11.94:381,12,0	1/1:2,6:8:8.82:109,9,0	1/1:1,2:3:8.96:120,9,0	1/1:2,6:8:18.53:319,19,0	1/1:5,3:8:22.14:259,22,0	1/1:0,2:2:6.02:107,6,0	1/1:2,1:3:8.93:95,9,0	1/1:7,6:13:24.97:296,25,0	1/1:7,3:10:20.92:301,21,0	1/1:7,6:11:23.03:334,23,0	1/1:5,5:10:6.74:76,7,0	1/1:14,4:14:6.02:99,6,0	1/1:1,2:3:8.70:123,9,0	1/1:2,2:4:3.01:59,3,0	1/1:6,6:11:15.04:220,15,0	1/1:1,5:6:18.06:339,18,0	1/1:7,8:13:26.10:437,26,0	1/1:1,2:3:6.02:112,6,0	1/1:1,4:5:12.51:232,13,0
chr10	15874314	.	ACCACCATCTCCACCACCACCACCT	A	11227.17	PASS	AB=0.778;AC=50;AF=0.893;AN=56;BaseQRankSum=-1.485;DP=402;FS=70.897;HRun=0;HaplotypeScore=240.0263;InbreedingCoeff=0.4750;MQ=47.25;MQ0=6;MQRankSum=1.208;QD=32.73;ReadPosRankSum=3.967;VQSLOD=1.3872;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:10,0:8:31.96:152,0,32	1/1:6,0:6:2.22:150,2,0	0/0:29,0:16:32.63:0,33,447	0/0:30,0:22:22.59:0,23,598	1/1:1,7:8:8.98:109,9,0	1/1:11,0:11:23.89:343,24,0	1/1:27,0:26:45.01:1007,45,0	1/1:4,0:3:6.01:72,6,0	1/1:11,0:11:30.06:491,30,0	1/1:2,11:13:24.06:374,24,0	0/1:2,8:10:19.89:45,0,20	1/1:11,0:11:26.99:446,27,0	1/1:14,0:13:21:292,21,0	1/1:9,0:9:23.51:325,24,0	1/1:9,0:9:23.95:473,24,0	1/1:11,0:11:29.88:396,30,0	1/1:25,0:25:50.97:1026,51,0	1/1:22,0:22:54.18:1305,54,0	1/1:6,10:14:24.05:394,24,0	1/1:3,7:10:10.28:194,10,0	1/1:39,0:34:44.72:739,45,0	1/1:6,0:6:12.02:173,12,0	1/1:9,0:8:11.89:170,12,0	1/1:29,0:27:68.62:1368,69,0	1/1:5,0:5:2.81:24,3,0	1/1:4,10:14:16.04:605,16,0	1/1:7,0:7:15:324,15,0	1/1:7,0:7:15.01:229,15,0
chr10	15874670	.	T	TAAA	13747.98	PASS	AB=0.850;AC=53;AF=0.946;AN=56;BaseQRankSum=-2.913;DP=551;FS=17.986;HRun=12;HaplotypeScore=85.1344;InbreedingCoeff=0.2096;MQ=68.63;MQ0=5;MQRankSum=-1.144;QD=24.95;ReadPosRankSum=1.511;VQSLOD=2.1161;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,25:33:49.41:844,49,0	1/1:2,1:7:11.98:149,12,0	0/1:19,0:9:1.22:1,0,49	0/1:15,0:10:29.55:35,0,30	1/1:3,11:17:5.40:503,5,0	0/1:4,14:22:1.24:433,0,1	1/1:3,5:16:24.06:373,24,0	1/1:2,0:35:58.64:752,59,0	1/1:5,13:18:30.10:546,30,0	1/1:7,13:23:54.11:816,54,0	1/1:3,9:15:32.95:436,33,0	1/1:1,13:17:33.07:518,33,0	1/1:0,2:13:18.05:270,18,0	1/1:2,0:21:39.18:520,39,0	1/1:4,9:15:30.08:503,30,0	1/1:2,8:11:24.08:436,24,0	1/1:4,15:26:48.16:857,48,0	1/1:3,11:15:22.24:302,22,0	1/1:2,0:15:29.29:310,29,0	1/1:5,0:21:27.86:411,28,0	1/1:0,0:12:30.09:426,30,0	1/1:0,0:11:21.90:255,22,0	1/1:1,0:22:36.12:553,36,0	1/1:2,1:25:41.89:616,42,0	1/1:5,9:17:16.30:276,16,0	1/1:8,22:35:78.07:1139,78,0	1/1:9,24:35:59.87:1051,60,0	1/1:6,7:15:27.05:418,27,0
chr10	15875095	.	GAGGGTAAATAA	G	42297	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=8.270;DP=557;FS=6.282;HRun=0;HaplotypeScore=233.1162;InbreedingCoeff=0.9501;MQ=86.97;MQ0=0;MQRankSum=-11.752;QD=84.76;ReadPosRankSum=8.483;VQSLOD=3.2972;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:4,22:26:48.16:1529,48,0	1/1:0,4:4:9.03:321,9,0	0/0:32,0:32:86.78:0,87,3421	0/0:26,0:24:66.15:0,66,3025	1/1:0,24:24:54.18:1796,54,0	1/1:0,23:23:57.20:2032,57,0	1/1:0,15:15:39.13:1363,39,0	1/1:1,30:31:90.28:2640,90,0	1/1:4,21:25:57.17:1947,57,0	1/1:3,27:30:81.28:2828,81,0	1/1:0,10:10:27.09:909,27,0	1/1:2,19:21:57.20:2031,57,0	1/1:4,21:25:66.23:2350,66,0	1/1:0,29:29:78.27:2780,78,0	1/1:2,23:25:63.22:2245,63,0	1/1:1,23:24:63.22:2246,63,0	1/1:0,9:9:24.08:802,24,0	1/1:1,5:6:12.04:428,12,0	1/1:0,13:13:39.02:1008,39,0	1/1:1,27:27:69.24:2386,69,0	1/1:3,13:16:30.10:927,30,0	1/1:1,19:20:51.18:1809,51,0	1/1:0,17:17:42.14:1494,42,0	1/1:1,12:13:21.07:712,21,0	1/1:0,11:11:30.10:1000,30,0	1/1:1,24:25:69.23:2362,69,0	1/1:1,21:22:44.08:1603,44,0	1/1:0,7:7:21.07:749,21,0
chr10	15875098	.	GGTAAATAAAGT	G	35002.28	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=9.470;DP=536;FS=7.513;HRun=0;HaplotypeScore=251.9380;InbreedingCoeff=0.9500;MQ=86.78;MQ0=0;MQRankSum=-11.748;QD=72.92;ReadPosRankSum=8.851;VQSLOD=3.2232;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:23:48.16:1243,48,0	1/1:4,0:4:9.03:267,9,0	0/0:31,0:31:92.28:0,92,3402	0/0:25,0:23:60.18:0,60,2915	1/1:24,0:24:54.14:1495,54,0	1/1:23,0:23:57.20:1689,57,0	1/1:15,0:15:39.13:1123,39,0	1/1:30,0:30:84.19:2014,84,0	1/1:21,1:22:54.16:1628,54,0	1/1:27,2:29:81.28:2322,81,0	1/1:10,0:10:27.09:755,27,0	1/1:20,0:20:57.20:1724,57,0	1/1:21,1:22:66.23:1982,66,0	1/1:29,0:29:78.27:2365,78,0	1/1:24,0:24:63.22:1891,63,0	1/1:23,1:24:63.22:1889,63,0	1/1:9,0:9:24.08:661,24,0	1/1:5,0:5:12.04:343,12,0	1/1:13,0:13:33.06:732,33,0	1/1:27,1:27:69.20:2015,69,0	1/1:14,0:14:29.99:749,30,0	1/1:19,1:20:51.18:1545,51,0	1/1:17,0:17:42.14:1282,42,0	1/1:12,0:12:21.07:592,21,0	1/1:11,0:11:30.06:821,30,0	1/1:24,0:24:66.22:1927,66,0	1/1:21,0:21:44.08:1336,44,0	1/1:7,0:7:21.07:612,21,0
chr10	15875518	.	CA	C	15648.72	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-0.867;DP=484;FS=5.194;HRun=1;HaplotypeScore=86.8582;InbreedingCoeff=0.9936;MQ=68.76;MQ0=3;MQRankSum=-3.119;QD=34.85;ReadPosRankSum=5.301;VQSLOD=4.6737;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,28:28:69.18:933,69,0	1/1:0,7:7:21.07:292,21,0	0/0:17,0:14:37.10:0,37,423	0/0:18,0:14:32.59:0,33,425	1/1:0,16:16:39.09:521,39,0	1/1:0,17:16:33.11:450,33,0	1/1:0,17:17:48.16:667,48,0	1/1:0,18:18:54.10:646,54,0	1/1:0,13:13:33.11:459,33,0	1/1:0,22:22:63.18:840,63,0	1/1:0,21:21:63.21:855,63,0	1/1:0,11:11:30.10:411,30,0	1/1:0,14:13:30.10:419,30,0	1/1:0,17:17:48.03:659,48,0	1/1:0,11:11:27.09:372,27,0	1/1:0,7:7:21.07:288,21,0	1/1:1,28:28:81.27:1128,81,0	1/1:0,17:17:39.13:542,39,0	1/1:0,16:16:45.13:591,45,0	1/1:0,13:13:39.09:521,39,0	1/1:0,15:15:27.09:374,27,0	1/1:0,23:23:51.17:700,51,0	1/1:0,16:16:39.13:543,39,0	1/1:0,16:15:36.12:501,36,0	1/1:0,18:18:42.14:586,42,0	1/1:0,26:26:78.14:979,78,0	1/1:0,24:23:57.97:786,58,0	1/1:0,17:17:42.14:586,42,0
chr10	15875615	.	T	TTA	5610.94	PASS	AB=0.732;AC=24;AF=0.429;AN=56;BaseQRankSum=15.207;DP=745;FS=104.145;HRun=0;HaplotypeScore=155.4636;InbreedingCoeff=-0.7610;MQ=51.60;MQ0=0;MQRankSum=-6.153;QD=8.41;ReadPosRankSum=-5.247;VQSLOD=0.1792;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:31,8:39:74.07:74,0,831	0/1:4,7:11:99:157,0,139	0/0:9,0:8:19.68:0,20,168	0/0:11,0:11:7.92:0,8,273	0/1:23,13:36:99:140,0,442	0/1:19,10:28:66.78:67,0,596	0/1:23,12:35:99:156,0,641	0/1:25,9:34:99:458,0,1021	0/1:24,9:33:42.13:42,0,989	0/1:17,11:28:99:616,0,558	0/1:8,7:16:15.90:16,0,268	0/1:14,17:31:99:196,0,516	0/1:25,7:32:99:147,0,987	0/1:20,9:29:65.24:65,0,900	0/1:21,12:33:99:282,0,787	0/1:8,10:18:99:198,0,342	0/1:22,6:28:90.15:90,0,603	0/1:23,6:29:99:263,0,837	0/1:17,7:25:99:368,0,730	0/1:16,14:30:99:207,0,528	0/0:32,7:39:10.93:0,11,940	0/0:16,3:19:30.10:0,30,485	0/1:11,13:24:99:145,0,298	0/1:20,6:26:99:120,0,445	0/1:9,10:19:99:108,0,257	0/1:18,18:36:99:987,0,724	0/1:25,13:38:99:620,0,965	0/1:5,3:8:90.65:91,0,128
chr10	15875943	.	A	AGTGTGTGT	10067.13	PASS	AB=1.000;AC=50;AF=0.893;AN=56;BaseQRankSum=-2.571;DP=704;FS=3.491;HRun=0;HaplotypeScore=241.0924;InbreedingCoeff=0.2715;MQ=54.72;MQ0=8;MQRankSum=-1.278;QD=15.54;ReadPosRankSum=2.104;VQSLOD=3.9353;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:37,0:36:12.22:138,12,0	1/1:8,0:11:12.86:146,13,0	0/0:26,0:20:4.78:0,5,26	0/0:30,0:18:2.18:0,2,124	1/1:22,5:28:15.02:218,15,0	1/1:6,8:17:2.98:36,3,0	1/1:14,0:14:9.03:126,9,0	1/1:29,0:29:35.33:651,35,0	0/1:33,0:31:23.09:344,0,23	1/1:30,3:32:60.11:1380,60,0	1/1:13,4:16:3.01:43,3,0	1/1:27,0:27:11.64:133,12,0	1/1:12,0:19:18.06:504,18,0	1/1:18,0:21:14.70:248,15,0	1/1:33,0:34:8.71:65,9,0	1/1:22,0:23:17.22:341,17,0	1/1:26,1:28:38.99:837,39,0	0/1:23,0:21:32.38:254,0,32	1/1:21,0:22:42.14:812,42,0	1/1:19,0:20:3.01:63,3,0	1/1:37,0:38:20.79:326,21,0	1/1:26,0:26:24.03:308,24,0	1/1:23,0:21:9.03:165,9,0	1/1:29,0:33:8.68:140,9,0	1/1:15,0:15:2.89:18,3,0	1/1:19,8:30:66.16:1790,66,0	1/1:23,3:28:35.99:650,36,0	1/1:11,1:12:15.05:332,15,0
chr10	15875966	.	G	GTGTGTC	6218.54	PASS	AB=1.000;AC=31;AF=0.554;AN=56;BaseQRankSum=0.281;DP=755;FS=7.909;HRun=0;HaplotypeScore=247.8772;InbreedingCoeff=-0.2556;MQ=46.10;MQ0=19;MQRankSum=2.298;QD=10.08;ReadPosRankSum=4.635;VQSLOD=2.1933;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:26,12:35:47.97:597,48,0	0/1:11,0:11:12.88:68,0,13	0/0:40,0:14:29.59:0,30,284	0/0:60,0:23:33.05:0,33,333	0/1:24,0:24:11.25:39,0,11	0/0:20,0:20:5.39:0,5,77	0/1:16,0:16:47.83:48,0,66	0/1:27,0:27:31.81:32,0,300	1/1:20,12:31:4.85:704,5,0	0/1:30,0:29:99:209,0,263	0/1:16,0:15:4.91:5,0,65	1/1:16,11:28:39:541,39,0	0/1:16,0:16:25.22:137,0,25	0/1:19,0:19:72.13:112,0,72	1/1:14,17:34:35.90:451,36,0	1/1:11,9:23:41.99:832,42,0	0/1:31,0:31:99:352,0,100	1/1:22,2:22:29.15:485,29,0	0/1:21,0:19:99:134,0,101	0/0:18,0:18:0.19:0,0,61	0/1:56,0:54:83.65:84,0,308	0/1:27,0:26:53.89:54,0,76	0/1:20,0:18:15.18:57,0,15	0/1:38,0:38:33.43:33,0,118	1/1:9,5:13:14.94:143,15,0	0/1:39,0:39:99:754,0,220	0/1:22,0:22:3.26:309,0,3	0/1:7,0:7:41.82:42,0,75
chr10	15876000	.	C	CTGTG	9855.20	PASS	AB=0.605;AC=47;AF=0.839;AN=56;BaseQRankSum=1.821;DP=859;FS=15.455;HRun=0;HaplotypeScore=239.7710;InbreedingCoeff=0.3005;MQ=49.85;MQ0=29;MQRankSum=5.022;QD=13.21;ReadPosRankSum=4.138;VQSLOD=2.8611;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:48:69.81:324,70,0	1/1:3,6:9:9.03:200,9,0	0/0:46,0:15:15.76:0,16,323	0/0:66,0:26:37.91:0,38,558	1/1:5,8:15:11.91:302,12,0	1/1:9,9:18:9.29:296,9,0	1/1:4,12:15:26.84:577,27,0	0/1:12,0:28:62.72:119,0,63	1/1:7,0:42:67.56:320,68,0	1/1:6,26:33:77.03:1645,77,0	1/1:8,12:20:39.06:775,39,0	0/1:11,0:28:20.50:95,0,20	1/1:10,0:23:38.92:175,39,0	1/1:4,0:25:8.18:105,8,0	1/1:16,0:45:53.08:239,53,0	1/1:5,0:28:42.04:194,42,0	1/1:4,23:28:39.12:936,39,0	0/1:10,0:23:62.78:118,0,63	1/1:15,0:24:31.25:170,31,0	1/1:0,0:25:41.93:189,42,0	0/1:14,0:79:10.93:352,0,11	1/1:5,0:28:47.79:224,48,0	1/1:4,0:17:19.58:88,20,0	1/1:9,0:48:61.03:276,61,0	0/1:5,0:16:24.65:66,0,25	1/1:9,23:34:72.03:1471,72,0	1/1:9,11:20:18.06:375,18,0	1/1:1,7:8:9.03:222,9,0
chr10	15876208	.	TTG	T	414.63	PASS	AB=0.969;AC=12;AF=0.214;AN=56;BaseQRankSum=6.463;DP=827;FS=0.586;HRun=0;HaplotypeScore=295.6831;InbreedingCoeff=0.0619;MQ=42.54;MQ0=31;MQRankSum=-4.789;QD=1.46;ReadPosRankSum=-5.805;VQSLOD=0.9491;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:32,8:40:0.65:153,1,0	0/0:6,0:6:8.44:0,8,73	0/0:44,0:10:15.05:0,15,236	0/1:46,0:11:12.90:13,0,167	0/0:17,0:17:8.44:0,8,68	0/0:21,0:21:5.68:0,6,42	0/0:37,0:35:18.47:0,18,199	0/0:32,0:25:14.20:0,14,131	0/1:31,2:32:9.70:112,0,10	0/0:46,0:45:4.95:0,5,61	0/0:19,0:18:8.99:0,9,75	1/1:24,5:29:15.56:87,16,0	0/1:26,0:26:9.88:28,0,10	0/0:37,0:36:9.10:0,9,80	0/1:31,1:31:40.32:48,0,40	0/1:19,3:21:3.68:78,0,4	0/0:26,0:24:4.12:0,4,62	0/1:21,1:22:19.46:19,0,20	0/1:31,0:21:13.74:14,0,72	0/0:21,0:20:0.44:0,0,1	0/0:78,0:76:6.77:0,7,45	0/0:32,0:31:11.27:0,11,83	0/0:20,0:20:1.66:0,2,21	0/0:45,0:45:0.26:0,0,25	0/0:14,0:14:3.16:0,3,142	0/0:32,0:31:3.91:0,4,114	0/0:16,0:16:8.46:0,8,51	0/1:3,0:3:0:0,0,0
chr10	15876220	.	GTC	G	6132.12	PASS	AB=1.000;AC=51;AF=0.911;AN=56;BaseQRankSum=1.218;DP=740;FS=2.921;HRun=0;HaplotypeScore=254.6650;InbreedingCoeff=0.2477;MQ=39.91;MQ0=26;MQRankSum=3.034;QD=8.60;ReadPosRankSum=-3.673;VQSLOD=3.9526;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:41,0:40:68.48:416,68,0	1/1:6,0:6:2.86:20,3,0	0/0:27,0:5:14.96:0,15,220	0/1:41,0:9:14.07:14,0,167	1/1:17,0:17:15.86:133,16,0	1/1:17,0:18:8.81:118,9,0	0/1:36,0:34:80.61:81,0,92	1/1:28,0:20:30.46:209,30,0	1/1:29,1:29:59.27:404,59,0	1/1:38,0:37:58.02:511,58,0	1/1:16,0:15:5.21:89,5,0	1/1:26,0:25:46.29:290,46,0	1/1:22,3:25:45.30:327,45,0	1/1:34,0:32:47.74:370,48,0	1/1:33,0:32:34.89:250,35,0	1/1:22,0:21:38.09:239,38,0	1/1:26,0:25:46.47:293,46,0	1/1:23,0:22:18.91:259,19,0	1/1:24,1:19:14.50:241,14,0	1/1:21,0:20:22.93:162,23,0	1/1:62,0:61:33.24:249,33,0	1/1:22,1:22:25.15:181,25,0	1/1:18,1:19:12.98:77,13,0	1/1:41,3:44:59.14:476,59,0	0/1:14,0:14:83.54:84,0,149	1/1:24,0:23:54.92:399,55,0	1/1:17,0:17:29.26:223,29,0	1/1:2,0:2:2.92:17,3,0
chr10	15876232	.	GTT	G	5226.98	PASS	AB=0.890;AC=52;AF=0.929;AN=56;BaseQRankSum=-0.351;DP=683;FS=7.242;HRun=3;HaplotypeScore=226.9149;InbreedingCoeff=-0.0622;MQ=38.17;MQ0=26;MQRankSum=-0.205;QD=7.65;ReadPosRankSum=2.083;VQSLOD=1.1964;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:39,0:37:28.72:303,29,0	1/1:6,0:6:5.44:41,5,0	0/1:20,0:5:9.96:10,0,83	0/1:29,0:5:11.01:11,0,25	1/1:13,0:13:10.86:85,11,0	1/1:16,2:18:14.12:157,14,0	0/1:10,21:30:82.50:83,0,97	1/1:26,0:18:33.19:201,33,0	1/1:33,0:33:1.91:205,2,0	1/1:4,21:24:27.57:214,28,0	1/1:15,0:14:0.29:58,0,0	1/1:19,0:18:33.29:174,33,0	1/1:23,2:25:41.31:291,41,0	1/1:32,0:30:41.01:319,41,0	1/1:38,0:37:18.35:182,18,0	1/1:21,0:21:22.79:151,23,0	1/1:20,5:23:48.85:447,49,0	1/1:22,0:21:1.48:178,1,0	1/1:21,1:15:30.09:258,30,0	1/1:22,0:21:21.32:158,21,0	1/1:54,3:56:26.92:195,27,0	1/1:23,1:23:24.56:188,25,0	1/1:19,0:19:6.40:48,6,0	1/1:33,4:37:38.21:315,38,0	0/1:14,0:14:33.90:34,0,145	1/1:24,1:24:64.82:508,65,0	1/1:20,0:19:51.35:337,51,0	1/1:4,0:4:8.93:76,9,0
chr10	15876242	.	GTGTGTGTC	G	1869.58	PASS	AB=0.991;AC=40;AF=0.714;AN=56;BaseQRankSum=4.369;DP=636;FS=0.000;HRun=0;HaplotypeScore=246.4405;InbreedingCoeff=0.1867;MQ=41.36;MQ0=17;MQRankSum=-3.918;QD=3.30;ReadPosRankSum=2.535;VQSLOD=2.4686;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:40,0:38:15.76:234,16,0	0/0:3,0:3:0.04:0,0,1	0/0:24,0:6:14.81:0,15,231	0/0:27,0:9:19.50:0,20,251	0/1:12,0:12:9.41:9,0,19	0/1:19,0:19:12.45:69,0,12	0/1:34,0:32:21.92:58,0,22	1/1:24,0:17:5.95:47,6,0	1/1:26,0:26:8.62:115,9,0	0/1:21,0:21:1.35:1,0,9	0/0:15,0:14:3.72:0,4,29	1/1:19,0:18:7.18:80,7,0	0/1:23,2:25:27.02:166,0,27	1/1:30,0:28:15.31:124,15,0	1/1:24,0:23:7.25:99,7,0	1/1:17,0:17:15.94:74,16,0	1/1:27,0:25:21.35:165,21,0	1/1:20,0:19:12.15:103,12,0	1/1:20,0:16:16.88:135,17,0	0/1:19,0:18:12.22:21,0,12	1/1:57,0:56:5.17:57,5,0	1/1:20,1:20:14.89:128,15,0	1/1:17,0:17:5.34:23,5,0	1/1:35,3:38:13.43:96,13,0	0/1:10,0:10:11.84:12,0,41	1/1:24,0:24:7.98:104,8,0	0/1:19,0:18:10.52:68,0,11	1/1:4,0:4:5.94:41,6,0
chr10	15876248	.	GTC	G	8575.70	PASS	AB=0.860;AC=49;AF=0.875;AN=56;BaseQRankSum=-0.641;DP=589;FS=17.003;HRun=0;HaplotypeScore=164.0557;InbreedingCoeff=0.5026;MQ=43.28;MQ0=13;MQRankSum=-1.071;QD=15.88;ReadPosRankSum=2.894;VQSLOD=3.4749;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:21,22:42:84.71:1346,85,0	1/1:2,0:2:3:25,3,0	0/0:22,0:7:20.89:0,21,216	0/0:26,0:12:9.81:0,10,247	1/1:10,0:10:14.02:105,14,0	1/1:11,1:12:14.16:181,14,0	0/1:33,0:32:1.18:232,0,1	1/1:22,0:18:35.76:239,36,0	1/1:15,14:29:56.49:880,56,0	1/1:14,0:14:26.67:191,27,0	0/1:7,0:6:3.77:18,0,4	1/1:12,9:20:51.01:599,51,0	1/1:21,0:21:39.59:291,40,0	1/1:30,0:28:38.53:290,39,0	1/1:1,25:25:45.51:657,46,0	1/1:0,19:19:41.54:589,42,0	1/1:20,1:20:44.11:380,44,0	1/1:11,10:20:44.93:503,45,0	1/1:16,1:15:34.21:276,34,0	1/1:19,0:18:24.06:152,24,0	1/1:53,0:52:32.70:240,33,0	1/1:21,0:20:21.41:184,21,0	1/1:17,0:17:11.49:75,11,0	1/1:38,0:38:37.76:321,38,0	0/1:3,8:11:32.92:174,0,33	1/1:17,0:17:41.29:363,41,0	1/1:11,1:12:31.01:187,31,0	1/1:4,0:4:8.95:79,9,0
chr10	15876622	.	G	GGT	2001.16	PASS	AB=0.979;AC=27;AF=0.482;AN=56;BaseQRankSum=-1.265;DP=637;FS=6.716;HRun=0;HaplotypeScore=193.7438;InbreedingCoeff=0.3466;MQ=64.68;MQ0=10;MQRankSum=-6.313;QD=6.03;ReadPosRankSum=-2.314;VQSLOD=2.3007;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:36,0:36:14.90:15,0,139	1/1:3,3:6:6.02:91,6,0	0/0:47,0:35:69.08:0,69,828	0/0:50,0:34:59.90:0,60,658	0/1:14,3:16:14.70:39,0,15	1/1:17,8:25:11.75:363,12,0	1/1:22,5:28:29.98:366,30,0	0/1:34,0:31:1.18:58,0,1	0/0:20,0:20:6.66:0,7,150	1/1:25,4:29:4.19:309,4,0	1/1:6,2:8:4.24:27,4,0	0/0:22,0:22:29.91:0,30,183	0/1:20,0:20:4.03:4,0,73	0/0:24,0:24:30.64:0,31,128	0/0:33,0:33:1.69:0,2,133	0/1:17,0:17:4.14:4,0,102	1/1:2,7:10:6.02:91,6,0	0/1:15,0:15:7.73:8,0,141	0/0:21,0:20:1.65:0,2,24	1/1:12,0:11:5.79:38,6,0	0/0:20,0:18:1.67:0,2,24	0/0:15,0:15:18.37:0,18,109	0/1:15,0:15:13.10:13,0,38	0/0:19,0:18:1.56:0,2,23	0/0:33,0:33:20.80:0,21,152	1/1:25,3:28:32.97:375,33,0	1/1:17,8:25:24.52:332,25,0	1/1:3,3:6:3.01:46,3,0
chr10	15876635	.	GTA	G	4049.10	PASS	AB=0.959;AC=31;AF=0.554;AN=56;BaseQRankSum=-3.858;DP=652;FS=9.259;HRun=0;HaplotypeScore=190.1706;InbreedingCoeff=0.0598;MQ=47.44;MQ0=18;MQRankSum=-0.439;QD=8.75;ReadPosRankSum=-3.653;VQSLOD=1.9955;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:32:76.35:76,0,147	0/0:5,0:5:4.99:0,5,18	0/0:58,0:29:80.21:0,80,1252	0/0:53,0:27:36.80:0,37,812	0/1:17,0:16:31.44:31,0,41	0/1:27,0:26:48.62:51,0,49	0/1:30,0:30:6.19:131,0,6	1/1:34,4:34:65.27:681,65,0	0/0:17,0:16:3.79:0,4,145	0/1:26,0:26:65.34:130,0,65	1/1:4,1:5:6:67,6,0	0/1:24,1:25:55.52:56,0,146	1/1:13,7:20:9.96:345,10,0	1/1:2,20:22:39.10:499,39,0	0/1:27,0:27:99:107,0,120	0/1:16,1:17:22.12:22,0,113	0/0:12,0:12:1.07:0,1,13	0/1:13,1:14:66.80:67,0,120	1/1:18,2:17:29.78:278,30,0	1/1:8,3:10:8.49:107,8,0	1/1:19,7:23:15.95:178,16,0	0/1:12,8:20:30.65:296,0,31	1/1:9,7:16:21.02:315,21,0	1/1:3,15:17:15.05:213,15,0	0/0:37,0:37:6.13:0,6,178	1/1:26,0:25:19.99:245,20,0	0/1:25,0:25:23.97:154,0,24	0/0:7,0:7:1.36:0,1,7
chr10	15876675	.	T	TAC	547.16	PASS	AB=0.829;AC=9;AF=0.161;AN=56;BaseQRankSum=8.092;DP=530;FS=38.169;HRun=0;HaplotypeScore=234.1149;InbreedingCoeff=-0.1909;MQ=57.12;MQ0=2;MQRankSum=-6.355;QD=4.34;ReadPosRankSum=4.231;VQSLOD=1.7007;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:27.05:0,27,413	0/1:4,1:5:32.82:33,0,114	0/0:40,0:29:84.26:0,84,1223	0/0:35,0:23:60.17:0,60,852	0/1:8,3:11:69.41:69,0,175	0/0:19,0:19:33.11:0,33,494	0/0:30,0:30:36.69:0,37,544	0/0:45,0:43:99:0,126,1811	0/0:12,0:12:24.08:0,24,351	0/0:22,4:26:29.57:0,30,657	0/1:6,2:8:73.62:74,0,82	0/0:19,0:19:24.08:0,24,361	0/0:13,0:13:27.09:0,27,384	0/0:13,0:13:33.11:0,33,486	0/0:19,0:19:33.11:0,33,497	0/0:18,0:18:27.09:0,27,388	0/0:6,0:6:12.51:0,13,185	0/0:9,0:9:18.06:0,18,275	0/0:23,0:22:57.19:0,57,856	0/1:8,4:12:92.14:92,0,123	0/0:28,0:28:27.07:0,27,391	0/1:17,5:22:99:163,0,342	0/1:14,1:15:7.75:8,0,298	0/0:13,0:13:15.05:0,15,221	0/1:24,6:30:99:192,0,325	0/1:17,2:19:30.16:30,0,396	0/0:16,0:16:21.54:0,22,317	0/1:3,1:4:25.92:26,0,40
chr10	15876688	.	AGTTCTGTGTGTTGTATAT	A	10909.04	PASS	AB=0.721;AC=49;AF=0.875;AN=56;BaseQRankSum=3.388;DP=505;FS=23.607;HRun=0;HaplotypeScore=272.9532;InbreedingCoeff=0.3694;MQ=68.14;MQ0=0;MQRankSum=-7.461;QD=24.96;ReadPosRankSum=3.352;VQSLOD=2.0007;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:6,17:23:8.04:154,8,0	1/1:2,2:4:0.31:194,0,0	0/0:32,0:30:69.17:0,69,1196	0/0:36,0:31:74.06:0,74,1760	0/1:9,1:10:0.20:77,0,0	1/1:4,13:17:24.08:593,24,0	1/1:10,17:27:24.08:619,24,0	1/1:34,0:34:60.18:1028,60,0	1/1:2,8:10:9.03:450,9,0	0/1:9,15:24:41.08:723,0,41	1/1:6,1:7:5.40:42,5,0	1/1:2,16:18:12.04:305,12,0	1/1:5,8:13:18.06:801,18,0	1/1:9,2:11:18.06:391,18,0	1/1:4,19:23:18.06:409,18,0	1/1:1,17:18:18.06:900,18,0	1/1:6,0:6:6.02:103,6,0	1/1:1,10:11:9.03:352,9,0	1/1:5,20:25:54.17:1156,54,0	0/1:7,9:16:1.82:188,0,2	1/1:9,21:30:6.25:150,6,0	1/1:13,7:20:22.92:236,23,0	1/1:4,8:12:14.89:211,15,0	1/1:10,1:11:3.99:82,4,0	1/1:18,14:32:12.74:258,13,0	1/1:4,14:18:28.04:1231,28,0	1/1:4,10:14:6.02:202,6,0	1/1:3,0:3:3.48:52,3,0
chr10	15876692	.	C	CTG	5464.85	PASS	AB=0.943;AC=43;AF=0.768;AN=56;BaseQRankSum=2.191;DP=496;FS=3.432;HRun=0;HaplotypeScore=196.5695;InbreedingCoeff=0.2606;MQ=69.70;MQ0=0;MQRankSum=-5.958;QD=13.20;ReadPosRankSum=0.620;VQSLOD=4.8409;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:22:9.28:157,9,0	0/1:3,1:4:1.99:47,0,2	0/0:38,0:35:75.07:0,75,872	0/0:35,0:32:79.99:0,80,1040	1/1:7,2:9:11.82:103,12,0	1/1:15,1:16:15.13:318,15,0	1/1:22,4:26:24.07:388,24,0	1/1:10,21:31:60.18:977,60,0	0/0:9,0:9:7.49:0,7,26	0/1:22,1:23:32.40:166,0,32	1/1:6,1:7:5.10:63,5,0	1/1:17,0:17:3.10:147,3,0	0/1:12,1:13:8.48:104,0,8	1/1:6,4:10:18.06:276,18,0	1/1:23,0:23:17.93:274,18,0	0/1:18,0:18:19.56:51,0,20	1/1:1,4:5:6.02:103,6,0	0/1:10,1:11:0.96:73,0,1	1/1:25,0:25:45.13:748,45,0	1/1:15,0:15:22.94:241,23,0	1/1:29,2:30:12.04:206,12,0	1/1:19,1:20:18.38:272,18,0	1/1:12,1:13:13.09:204,13,0	1/1:6,5:11:5.38:84,5,0	0/1:32,0:32:26.35:96,0,26	1/1:17,1:18:14.83:246,15,0	0/1:12,0:12:3.05:46,0,3	1/1:1,1:2:5.98:72,6,0
chr10	15876701	.	GTA	G	678.26	PASS	AB=0.873;AC=20;AF=0.357;AN=56;BaseQRankSum=9.181;DP=441;FS=63.355;HRun=0;HaplotypeScore=193.0527;InbreedingCoeff=-0.1547;MQ=72.22;MQ0=0;MQRankSum=-7.488;QD=2.99;ReadPosRankSum=6.290;VQSLOD=0.6052;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:11.25:0,11,151	0/1:3,1:4:8.23:8,0,43	0/0:40,0:39:99:0,104,1752	0/0:45,0:42:99:0,105,1783	0/1:3,3:6:5.97:6,0,43	0/1:14,0:14:7.15:7,0,227	0/0:21,0:21:6.34:0,6,281	0/0:18,0:18:39.10:0,39,663	1/1:8,0:8:8.52:42,9,0	0/1:16,4:20:15.45:15,0,141	1/1:4,2:6:5.28:35,5,0	0/1:16,0:16:2.11:2,0,133	0/1:10,0:10:31.19:52,0,31	0/0:6,0:6:1.06:0,1,179	0/0:19,0:19:3.92:0,4,227	1/1:17,0:17:17.04:84,17,0	0/0:4,0:4:6.02:0,6,83	0/1:11,0:11:19.24:19,0,31	0/1:21,0:21:17.59:18,0,123	0/1:9,6:15:99:108,0,122	0/0:24,0:23:9:0,9,121	0/1:11,6:17:93.16:93,0,134	0/0:10,1:11:13.18:0,13,163	0/0:6,0:6:2.94:0,3,48	0/1:25,7:32:35.22:236,0,35	0/1:15,2:17:22.04:93,0,22	0/1:10,0:10:8.13:8,0,42	0/1:2,1:3:10.90:11,0,45
chr10	15876831	.	GTTCT	G	1242.01	PASS	AB=0.831;AC=4;AF=0.071;AN=56;BaseQRankSum=8.943;DP=660;FS=63.289;HRun=0;HaplotypeScore=174.2402;InbreedingCoeff=-0.0880;MQ=61.11;MQ0=1;MQRankSum=-8.002;QD=9.48;ReadPosRankSum=1.856;VQSLOD=1.0867;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:48.03:0,48,930	0/0:6,0:6:17.96:0,18,335	0/0:40,0:33:51.88:0,52,1607	0/0:37,0:33:75.10:0,75,1530	0/0:26,0:27:66.65:0,67,1631	0/0:13,1:14:2.79:0,3,674	0/1:33,5:39:63.89:64,0,1707	0/1:39,21:60:99:1030,0,2392	0/0:17,0:17:45.11:0,45,1027	0/0:46,3:53:11.87:0,12,3111	0/0:17,4:21:41.44:0,41,848	0/0:21,1:22:19.43:0,19,990	0/0:12,0:12:36.11:0,36,843	0/0:14,0:14:39.05:0,39,798	0/0:29,2:31:14.71:0,15,1622	0/0:18,0:18:48.12:0,48,1111	0/0:6,0:6:12.04:0,12,211	0/1:7,1:8:39.76:40,0,229	0/1:19,5:24:99:218,0,663	0/0:32,3:36:70.04:0,70,2046	0/0:25,0:25:72.25:0,72,1787	0/0:27,5:32:47.27:0,47,1799	0/0:16,2:18:43.63:0,44,801	0/0:14,0:14:33.44:0,33,678	0/0:18,0:18:37.22:0,37,886	0/0:21,0:22:26.36:0,26,1066	0/0:18,0:17:45.19:0,45,916	0/0:8,1:9:24.55:0,25,590
chr10	15877850	.	C	CT	3513.14	PASS	AB=0.833;AC=47;AF=0.839;AN=56;BaseQRankSum=1.706;DP=169;FS=40.296;HRun=1;HaplotypeScore=74.4403;InbreedingCoeff=0.4791;MQ=38.44;MQ0=12;MQRankSum=-1.300;QD=23.27;ReadPosRankSum=3.706;VQSLOD=1.5870;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,8:7:18.02:172,18,0	1/1:1,3:4:12:116,12,0	0/0:8,0:2:2.50:0,2,23	0/0:5,0:3:5.17:0,5,21	0/0:2,1:3:2.68:0,3,11	1/1:2,5:7:20.53:190,21,0	1/1:2,10:12:35.99:345,36,0	1/1:6,6:7:20.96:190,21,0	1/1:1,4:5:15:143,15,0	1/1:2,5:6:18:174,18,0	0/0:0,2:1:2.22:0,2,7	1/1:0,4:4:12.02:115,12,0	1/1:0,5:5:15.03:156,15,0	1/1:4,7:9:23.97:220,24,0	1/1:1,3:4:11.99:112,12,0	1/1:2,4:5:15:144,15,0	1/1:2,0:2:5.95:42,6,0	1/1:1,4:5:9.02:100,9,0	1/1:2,6:6:18.02:181,18,0	1/1:1,2:3:6.01:62,6,0	1/1:1,4:4:0.28:78,0,0	1/1:0,5:5:12.03:126,12,0	1/1:0,4:4:12.03:123,12,0	1/1:3,8:10:28.95:248,29,0	1/1:0,2:2:5.85:46,6,0	1/1:3,8:10:29.34:267,29,0	1/1:1,3:4:12:113,12,0	0/1:4,1:3:32.76:48,0,33
chr10	15877855	.	A	AG	850.21	PASS	AB=0.874;AC=30;AF=0.536;AN=56;BaseQRankSum=0.317;DP=268;FS=4.901;HRun=0;HaplotypeScore=101.0255;InbreedingCoeff=-0.3415;MQ=43.21;MQ0=9;MQRankSum=0.155;QD=3.63;ReadPosRankSum=1.332;VQSLOD=2.7059;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:9,8:15:23.54:27,0,24	0/1:5,0:5:13.83:14,0,20	0/0:12,0:4:6.02:0,6,69	0/0:9,0:4:8.45:0,8,58	1/1:4,0:4:2.98:22,3,0	0/1:7,0:7:4.19:4,0,17	0/1:12,5:17:30.43:30,0,48	0/1:21,0:17:34.36:166,0,34	0/1:9,0:9:23.68:41,0,24	0/1:7,10:17:12.67:122,0,13	1/1:3,0:2:5.97:45,6,0	0/1:6,0:6:3.30:32,0,3	1/1:6,0:6:1.66:23,2,0	0/1:13,0:12:27.54:28,0,36	0/1:4,4:8:10.95:18,0,11	0/0:5,3:7:4.03:0,4,39	0/1:5,0:5:12.29:12,0,31	1/1:12,0:12:1.35:81,1,0	0/1:9,5:12:25.51:58,0,26	1/1:3,6:9:8.19:56,8,0	1/1:9,0:8:12.30:67,12,0	0/1:6,0:6:1.17:18,0,1	0/1:5,3:8:4.24:4,0,6	0/1:15,0:14:34.80:36,0,35	0/1:3,0:3:16.91:21,0,17	0/1:10,4:13:43.51:44,0,60	0/1:4,2:6:10.88:32,0,11	0/0:5,0:3:3.02:0,3,36
chr10	15877863	.	A	AAAAAAG	9282.44	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-0.118;DP=309;FS=63.366;HRun=0;HaplotypeScore=103.4917;InbreedingCoeff=0.7016;MQ=53.38;MQ0=3;MQRankSum=-3.489;QD=32.57;ReadPosRankSum=1.998;VQSLOD=2.1698;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:17,3:18:20.97:389,21,0	1/1:2,3:5:11.89:200,12,0	0/0:12,0:6:8.18:0,8,137	0/0:12,0:7:14.99:0,15,156	1/1:1,1:5:5.95:93,6,0	1/1:1,4:11:18.06:493,18,0	1/1:10,6:16:24.08:613,24,0	1/1:23,1:21:52.94:523,53,0	1/1:7,2:9:23.77:325,24,0	1/1:16,3:19:41.49:578,41,0	1/1:4,1:4:5.96:111,6,0	1/1:4,1:6:17.93:323,18,0	1/1:5,3:8:23.88:453,24,0	1/1:10,4:13:29.69:486,30,0	1/1:6,3:9:17.91:309,18,0	1/1:6,2:7:6.02:166,6,0	1/1:8,0:8:8.87:130,9,0	1/1:13,3:16:41.65:517,42,0	1/1:11,4:14:32.48:484,32,0	1/1:8,2:10:17.93:260,18,0	1/1:7,4:11:29.81:447,30,0	1/1:7,2:9:12.36:266,12,0	1/1:8,1:9:14.23:216,14,0	1/1:9,7:15:35.75:672,36,0	1/1:4,1:5:14.97:198,15,0	1/1:13,3:15:33.03:608,33,0	1/1:4,3:7:17.95:319,18,0	1/1:3,1:3:5.97:102,6,0
chr10	15878080	.	C	CTG	3602.94	PASS	AB=0.679;AC=35;AF=0.673;AN=52;BaseQRankSum=-0.074;DP=369;FS=16.317;HRun=0;HaplotypeScore=66.1641;InbreedingCoeff=0.4780;MQ=63.95;MQ0=20;MQRankSum=-2.318;QD=15.94;ReadPosRankSum=5.121;VQSLOD=2.0647;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:1,0:7:0.89:0,1,2	1/1:0,5:5:0.37:0,0,0	0/0:38,0:12:30.10:0,30,434	0/0:34,0:13:35.80:0,36,474	./.	1/1:1,9:12:15.04:269,15,0	1/1:3,16:19:0.47:1,0,0	1/1:0,11:11:27.94:371,28,0	0/1:0,0:7:0:0,0,0	1/1:1,11:13:35.95:592,36,0	1/1:4,0:3:6.02:98,6,0	./.	1/1:16,0:16:4.24:423,4,0	0/1:12,0:11:19.51:168,0,20	0/0:0,0:6:0:0,0,0	0/0:1,0:4:2.97:0,3,20	1/1:2,22:25:9.74:160,10,0	1/1:1,0:14:2.92:17,3,0	1/1:1,8:11:26.77:306,27,0	1/1:4,0:4:6.02:97,6,0	0/0:4,27:32:9.01:0,9,87	1/1:4,5:9:3.01:49,3,0	1/1:5,0:5:2.50:9,2,0	1/1:24,2:27:23.23:454,23,0	0/0:5,0:5:8.51:0,9,45	1/1:1,10:11:14.48:411,14,0	0/1:1,5:7:16.83:55,0,17	1/1:2,6:7:6.02:122,6,0
chr10	15878833	.	GTGCA	G	4336.31	PASS	AB=0.851;AC=39;AF=0.696;AN=56;BaseQRankSum=3.174;DP=664;FS=143.306;HRun=0;HaplotypeScore=203.9123;InbreedingCoeff=0.2283;MQ=51.76;MQ0=11;MQRankSum=-1.971;QD=7.86;ReadPosRankSum=1.369;VQSLOD=-0.1754;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:33:8.14:8,0,102	1/1:7,2:9:3.52:76,4,0	0/0:20,0:10:15.05:0,15,265	0/0:31,0:14:19.89:0,20,305	0/1:9,16:25:2.09:74,0,2	1/1:5,21:26:16.95:217,17,0	1/1:18,7:25:17.35:245,17,0	1/1:28,0:28:14.40:165,14,0	1/1:23,2:25:1.77:76,2,0	1/1:28,13:40:58.42:817,58,0	1/1:11,8:19:16.94:252,17,0	0/1:24,1:24:2.06:2,0,11	0/1:5,14:19:23.34:188,0,23	1/1:14,8:22:12.55:260,13,0	0/1:21,1:20:17.02:95,0,17	0/1:16,1:16:3.76:69,0,4	1/1:5,21:26:3.58:90,4,0	0/1:27,0:27:24.36:61,0,24	1/1:22,1:22:17.08:158,17,0	0/1:12,21:32:5.21:143,0,5	0/0:17,21:38:1.02:0,1,10	1/1:2,16:18:8.51:99,9,0	1/1:5,7:11:13.06:176,13,0	0/0:10,13:22:6.09:0,6,42	0/1:15,0:14:0.28:7,0,0	1/1:14,15:29:21.75:515,22,0	1/1:6,17:23:12.58:374,13,0	1/1:0,10:10:12.04:171,12,0
chr10	15878836	.	CATGCGT	C	937.91	PASS	AB=0.960;AC=22;AF=0.393;AN=56;BaseQRankSum=1.590;DP=651;FS=37.163;HRun=0;HaplotypeScore=228.3581;InbreedingCoeff=-0.2916;MQ=51.42;MQ0=16;MQRankSum=-5.406;QD=2.20;ReadPosRankSum=-2.376;VQSLOD=1.2674;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:22.76:0,23,331	0/1:8,2:10:32.25:67,0,32	0/0:21,0:9:15.07:0,15,294	0/0:31,0:14:17.83:0,18,328	0/1:22,2:24:33.16:64,0,33	0/1:24,2:26:17.58:74,0,18	0/1:23,1:24:5.86:6,0,68	0/0:24,0:24:20.74:0,21,272	0/1:23,1:24:30.86:31,0,230	0/1:40,1:40:99:136,0,166	0/1:19,0:19:67.22:67,0,75	0/0:25,0:24:29.11:0,29,245	0/1:18,0:18:14.66:15,0,50	0/1:21,0:21:6.13:6,0,117	0/1:22,0:20:30.31:30,0,196	0/0:17,0:15:3:0,3,149	1/1:25,0:25:1.42:10,1,0	0/1:27,0:26:85.29:85,0,268	0/1:22,0:21:95.15:95,0,107	0/1:31,1:31:49.44:49,0,77	0/0:33,0:33:1.64:0,2,44	1/1:18,0:18:6.13:16,6,0	0/1:15,0:14:1.43:1,0,53	0/0:23,0:22:6.09:0,6,53	0/0:16,0:14:8.87:0,9,196	0/1:23,2:26:99:179,0,164	0/1:20,2:22:9.76:145,0,10	1/1:10,0:10:3.36:16,3,0
chr10	15878840	.	CGT	C	3604.25	PASS	AB=0.966;AC=31;AF=0.554;AN=56;BaseQRankSum=6.966;DP=680;FS=1.766;HRun=0;HaplotypeScore=200.6711;InbreedingCoeff=-0.1255;MQ=49.04;MQ0=16;MQRankSum=-3.453;QD=6.69;ReadPosRankSum=6.746;VQSLOD=3.0400;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,20:39:34.90:449,35,0	0/1:11,0:11:18.08:18,0,59	0/0:18,0:5:3.01:0,3,45	0/0:30,0:10:2.92:0,3,24	0/1:25,0:25:15.58:16,0,42	0/1:27,0:27:5.81:44,0,6	0/1:26,0:26:7.65:8,0,91	0/0:18,0:26:26.06:0,26,202	1/1:8,15:23:24.46:420,24,0	0/1:39,0:38:99:121,0,124	0/1:19,0:19:38.13:43,0,38	1/1:7,19:25:42.12:488,42,0	0/1:19,1:20:18.29:18,0,29	0/1:21,0:21:29.67:30,0,48	1/1:12,8:18:23.86:260,24,0	1/1:6,11:15:38.60:425,39,0	0/1:27,0:27:14.84:15,0,24	1/1:9,19:27:9.54:581,10,0	0/1:20,0:18:2.65:3,0,86	0/1:34,0:33:35.44:35,0,64	0/0:38,0:38:5.70:0,6,65	1/1:19,0:19:5.39:23,5,0	0/1:15,1:15:10.95:11,0,84	0/0:28,0:27:5.99:0,6,57	0/1:6,13:17:54.69:308,0,55	0/1:28,0:28:44.87:121,0,45	1/1:21,1:22:27.35:143,27,0	0/1:13,0:13:25.65:26,0,29
chr10	15878985	.	TGGAGCTGAATTGGACAGTCTGCCCTGGGGAGTCCAAGCTGTC	T	25159.91	PASS	AB=0.745;AC=24;AF=0.429;AN=56;BaseQRankSum=12.754;DP=327;FS=6.063;HRun=0;HaplotypeScore=387.5653;InbreedingCoeff=-0.2301;MQ=65.17;MQ0=0;MQRankSum=-4.424;QD=98.67;ReadPosRankSum=8.031;VQSLOD=2.2147;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:16,4:20:43.73:1156,0,44	0/1:4,4:8:1.78:1129,0,2	0/0:9,0:9:27.08:0,27,1570	0/0:11,0:11:33.11:0,33,1921	1/1:9,1:10:3.01:199,3,0	0/1:6,4:10:34.80:1019,0,35	0/0:15,0:15:19.57:0,20,90	0/0:9,0:9:7.62:0,8,42	0/1:5,5:11:20.67:1474,0,21	0/1:12,1:13:60.80:284,0,61	0/1:10,1:11:9.64:300,0,10	0/1:8,9:17:17.90:2635,0,18	0/1:8,7:15:37.19:1831,0,37	0/1:5,5:10:24.47:1527,0,24	0/1:11,5:16:52.07:1390,0,52	0/1:4,3:7:14.58:978,0,15	0/1:4,3:7:13.70:767,0,14	0/0:6,0:6:14.98:0,15,58	0/1:2,1:3:11.30:308,0,11	1/1:10,7:17:0.63:1672,1,0	0/0:11,0:11:16.31:0,16,72	0/1:9,3:12:1.08:668,0,1	0/1:9,6:15:0.81:1296,0,1	0/0:11,0:10:2.46:0,2,13	1/1:3,9:12:17.44:2543,17,0	0/1:13,4:17:20.31:1263,0,20	0/1:12,6:18:0.74:1888,0,1	0/1:3,3:6:5.67:831,0,6
chr10	15879022	.	GC	G	634.11	PASS	AC=42;AF=0.913;AN=46;BaseQRankSum=8.875;DP=147;FS=6.129;HRun=1;HaplotypeScore=186.5367;InbreedingCoeff=0.5216;MQ=133.14;MQ0=0;MQRankSum=-8.773;QD=6.22;ReadPosRankSum=7.014;VQSLOD=0.5913;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,0:5:6.17:20,6,0	1/1:4,0:4:8.22:25,8,0	0/0:22,0:22:63.20:0,63,920	0/0:20,0:20:42.19:0,42,785	1/1:2,0:2:3.46:24,3,0	1/1:4,0:4:7.81:23,8,0	./.	./.	1/1:6,0:6:13.12:54,13,0	1/1:2,0:2:5.20:28,5,0	1/1:1,0:1:1.82:5,2,0	1/1:9,1:10:21.99:81,22,0	1/1:7,0:7:13.32:42,13,0	1/1:5,0:5:11.10:35,11,0	1/1:5,0:5:9.35:29,9,0	1/1:4,0:4:6.66:21,7,0	1/1:3,0:3:4.44:14,4,0	./.	1/1:1,0:1:2.22:7,2,0	1/1:7,0:7:10.88:30,11,0	./.	1/1:4,0:4:5.86:31,6,0	1/1:6,1:7:8.76:53,9,0	./.	1/1:9,2:11:24.04:112,24,0	1/1:4,1:5:11.89:61,12,0	1/1:6,0:6:13.32:42,13,0	1/1:3,0:3:6.48:20,6,0
chr10	15880076	.	GGAGAGAGAGAGAGAGA	G	7773.24	PASS	AB=0.667;AC=13;AF=0.232;AN=56;BaseQRankSum=5.422;DP=671;FS=39.453;HRun=0;HaplotypeScore=275.4726;InbreedingCoeff=0.8260;MQ=61.58;MQ0=12;MQRankSum=-9.399;QD=42.95;ReadPosRankSum=2.392;VQSLOD=3.0620;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:21,18:38:27.09:832,27,0	0/0:7,0:7:12.04:0,12,563	0/0:24,0:10:0:0,0,0	0/0:28,0:16:8.83:0,9,194	0/0:23,0:26:23.11:0,23,1134	0/0:18,0:17:33.11:0,33,2067	0/0:27,0:27:39.13:0,39,2002	0/0:23,0:21:12.04:0,12,313	1/1:11,17:28:38.89:1654,39,0	0/0:27,0:26:51.16:0,51,2610	0/0:23,0:23:18.06:0,18,1006	1/1:13,14:28:33.11:1262,33,0	0/0:16,0:27:48.16:0,48,1253	0/0:22,0:35:30.10:0,30,565	1/1:14,11:27:33.11:1412,33,0	0/1:15,15:30:18.72:1618,0,19	0/0:23,0:26:35.33:0,35,1265	1/1:8,4:10:6.02:264,6,0	0/0:18,0:22:33.11:0,33,860	0/0:11,0:16:24.50:0,25,380	0/0:19,0:27:33.11:0,33,960	0/0:14,0:27:36.12:0,36,984	0/0:13,0:18:15.05:0,15,356	0/0:16,0:24:27.09:0,27,740	1/1:3,13:16:18.06:731,18,0	0/0:22,0:22:44.18:0,44,2608	0/0:20,0:25:34.47:0,34,1685	0/0:14,0:14:30.10:0,30,1343
chr10	15882164	.	AG	A	4186.81	PASS	AB=0.815;AC=26;AF=0.464;AN=56;BaseQRankSum=9.448;DP=832;FS=3.941;HRun=2;HaplotypeScore=248.4849;InbreedingCoeff=-0.8493;MQ=58.00;MQ0=2;MQRankSum=-7.022;QD=5.27;ReadPosRankSum=2.091;VQSLOD=0.6976;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:44,12:56:99:229,0,1162	0/1:6,2:8:4.29:4,0,246	0/0:19,0:18:38.60:0,39,437	0/0:19,0:17:51.03:0,51,671	0/1:12,6:18:76.44:76,0,270	0/1:27,8:35:99:121,0,926	0/1:49,9:58:99:220,0,1446	0/1:32,2:34:99:136,0,1025	0/1:22,10:32:99:242,0,716	0/1:30,6:36:99:138,0,934	0/1:14,3:17:19.76:20,0,455	0/1:27,10:37:99:123,0,929	0/1:14,8:22:99:128,0,408	0/1:28,17:45:99:180,0,905	0/1:20,11:31:99:289,0,496	0/1:13,4:17:99:121,0,355	0/1:31,10:41:99:248,0,624	0/1:17,8:25:99:282,0,242	0/1:16,2:18:99:176,0,284	0/1:15,3:18:61.45:61,0,448	0/1:69,6:75:99:278,0,1013	0/1:16,5:21:99:156,0,412	0/1:9,2:11:44.12:44,0,197	0/1:31,8:39:99:318,0,447	0/1:29,9:38:99:237,0,922	0/1:22,12:34:99:153,0,711	0/1:11,6:17:99:126,0,296	0/1:10,1:11:81.44:81,0,231
chr10	15882170	.	G	GC	3834.98	PASS	AB=0.823;AC=24;AF=0.429;AN=56;BaseQRankSum=10.585;DP=846;FS=3.657;HRun=1;HaplotypeScore=248.2949;InbreedingCoeff=-0.7485;MQ=57.89;MQ0=1;MQRankSum=-7.953;QD=5.07;ReadPosRankSum=2.241;VQSLOD=0.5136;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:43,11:54:99:288,0,1006	0/1:7,2:9:12.98:13,0,228	0/0:20,0:18:37.63:0,38,450	0/0:18,0:17:42.87:0,43,475	0/1:11,6:17:28.67:29,0,217	0/1:27,8:35:99:119,0,830	0/1:56,7:63:99:188,0,1457	0/0:34,1:35:19.12:0,19,1017	0/1:21,10:31:99:191,0,652	0/1:30,6:36:99:175,0,831	0/0:14,2:16:20.09:0,20,444	0/1:28,9:37:99:130,0,830	0/1:18,8:26:99:180,0,476	0/1:29,17:46:99:244,0,845	0/1:21,10:31:99:312,0,478	0/1:12,4:16:99:107,0,325	0/1:39,9:48:99:272,0,821	0/1:18,6:24:99:252,0,279	0/1:16,1:17:98.03:98,0,333	0/1:15,3:18:75.47:75,0,417	0/1:74,5:79:99:215,0,1203	0/1:17,5:22:99:124,0,389	0/1:11,2:13:83.29:83,0,272	0/1:30,7:37:99:229,0,473	0/1:26,7:33:63.14:63,0,805	0/1:24,12:36:99:226,0,678	0/1:13,5:18:99:111,0,301	0/1:10,1:11:99:111,0,201
chr10	15882283	.	A	AAG	31179.95	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-7.378;DP=682;FS=0.000;HRun=0;HaplotypeScore=81.6081;InbreedingCoeff=0.9955;MQ=81.23;MQ0=0;MQRankSum=-9.063;QD=48.49;ReadPosRankSum=5.378;VQSLOD=6.1262;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,64:65:99:3089,166,0	1/1:1,7:8:18.06:337,18,0	0/0:16,0:16:39.08:0,39,483	0/0:23,0:23:33.29:0,33,633	1/1:3,18:21:51.17:955,51,0	1/1:1,19:20:51.17:936,51,0	1/1:2,35:37:96.33:1796,96,0	1/1:2,34:36:99:1877,102,0	1/1:0,14:14:33.11:617,33,0	1/1:0,23:23:66.13:1167,66,0	1/1:2,13:16:39.13:730,39,0	1/1:0,17:18:45.15:842,45,0	1/1:2,20:22:54.19:1010,54,0	1/1:2,26:28:72.20:1310,72,0	1/1:2,26:28:75.26:1403,75,0	1/1:1,21:22:63.22:1180,63,0	1/1:0,27:27:60.21:1123,60,0	1/1:2,21:23:57.20:1067,57,0	1/1:2,21:24:72.16:1147,72,0	1/1:0,14:15:45.15:820,45,0	1/1:2,35:38:99:1966,105,0	1/1:1,16:17:45.15:823,45,0	1/1:0,22:22:60.21:1123,60,0	1/1:1,31:32:81.28:1516,81,0	1/1:1,26:27:75.26:1405,75,0	1/1:0,23:24:72.23:1316,72,0	1/1:2,14:16:42.14:786,42,0	1/1:1,17:18:45.15:840,45,0
chr10	15883337	.	A	AG	21583	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-7.786;DP=519;FS=3.473;HRun=0;HaplotypeScore=45.0305;InbreedingCoeff=0.9929;MQ=83.37;MQ0=0;MQRankSum=-8.383;QD=44.14;ReadPosRankSum=5.310;VQSLOD=4.6528;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,27:28:75.26:1198,75,0	1/1:0,14:14:36.12:576,36,0	0/0:17,0:17:51.07:0,51,666	0/0:13,0:13:18.78:0,19,479	1/1:1,22:23:60.20:947,60,0	1/1:0,23:23:66.23:1055,66,0	1/1:0,10:10:24.08:384,24,0	1/1:1,38:39:99:1798,114,0	1/1:0,16:16:42.14:670,42,0	1/1:1,24:25:72.23:1110,72,0	1/1:0,18:18:54.18:863,54,0	1/1:0,16:16:48.16:768,48,0	1/1:0,14:14:42.14:672,42,0	1/1:0,12:12:24.08:384,24,0	1/1:0,15:15:45.15:720,45,0	1/1:0,15:15:45.15:719,45,0	1/1:0,13:13:39.13:624,39,0	1/1:0,19:19:51.17:815,51,0	1/1:2,24:26:78.27:1231,78,0	1/1:0,22:22:60.20:958,60,0	1/1:0,9:9:24.08:384,24,0	1/1:0,13:13:39.13:624,39,0	1/1:1,18:19:42.14:671,42,0	1/1:0,11:11:30.10:480,30,0	1/1:0,26:26:75.26:1199,75,0	1/1:0,24:24:69.24:1104,69,0	1/1:0,22:22:57.19:911,57,0	1/1:0,17:17:45.15:719,45,0
chr10	15883861	.	GC	G	9846.84	PASS	AB=1.000;AC=53;AF=0.946;AN=56;BaseQRankSum=-6.648;DP=475;FS=7.337;HRun=9;HaplotypeScore=60.8399;InbreedingCoeff=0.7461;MQ=75.80;MQ0=0;MQRankSum=-5.048;QD=21.74;ReadPosRankSum=4.167;VQSLOD=5.5000;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,31:36:75.02:686,75,0	1/1:0,7:7:21.01:192,21,0	0/0:22,0:22:16.47:0,16,401	0/1:12,0:12:0.31:0,0,198	1/1:3,10:13:24:220,24,0	1/1:5,19:24:59.94:539,60,0	1/1:0,22:22:59.61:549,60,0	1/1:6,13:20:39:357,39,0	1/1:0,12:12:33.02:302,33,0	1/1:2,12:14:29.98:270,30,0	1/1:1,9:11:27.01:247,27,0	1/1:0,9:9:24.01:220,24,0	1/1:1,14:15:42.02:384,42,0	1/1:1,13:14:36.02:330,36,0	1/1:2,17:19:51.03:467,51,0	1/1:1,8:9:21.01:192,21,0	1/1:4,35:39:70.43:899,70,0	1/1:2,13:15:39.02:356,39,0	1/1:0,13:13:35.94:311,36,0	1/1:2,17:20:44:390,44,0	1/1:3,20:23:60.03:549,60,0	1/1:2,14:16:39.02:357,39,0	1/1:2,11:13:36.02:329,36,0	1/1:6,23:29:69.03:632,69,0	1/1:1,10:11:24.01:220,24,0	1/1:1,15:16:39:357,39,0	1/1:1,18:19:51.03:467,51,0	1/1:1,1:2:3:27,3,0
chr10	15884663	.	G	GTC	6311.62	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=5.122;DP=445;FS=4.859;HRun=0;HaplotypeScore=95.2461;InbreedingCoeff=0.9826;MQ=90.18;MQ0=0;MQRankSum=-3.736;QD=49.70;ReadPosRankSum=2.384;VQSLOD=5.6777;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:72.22:0,72,1148	1/1:0,5:5:15.05:304,15,0	0/0:19,0:19:54.13:0,54,815	0/0:21,0:21:22.14:0,22,777	1/1:1,9:9:15.05:304,15,0	1/1:1,5:6:15.05:304,15,0	1/1:1,27:30:75.26:1521,75,0	0/0:17,0:17:51.16:0,51,789	0/0:18,0:18:54.18:0,54,875	1/1:0,14:13:39.13:790,39,0	1/1:3,10:14:27.08:540,27,0	0/0:13,0:13:39.13:0,39,631	0/0:16,0:16:48.16:0,48,780	0/0:17,0:17:51.17:0,51,832	0/0:18,0:18:48.16:0,48,783	0/0:11,0:11:33.11:0,33,534	1/1:1,19:20:51.18:1032,51,0	0/0:20,0:20:60.20:0,60,979	0/0:19,0:19:51.17:0,51,831	0/0:9,0:9:27.09:0,27,441	0/0:33,0:33:82.31:0,82,1269	0/0:16,0:16:42.13:0,42,654	0/0:6,0:6:12.04:0,12,195	0/0:28,0:28:84.29:0,84,1367	0/0:12,0:12:36.12:0,36,587	1/1:0,7:9:24.08:474,24,0	1/1:2,13:15:42.14:799,42,0	1/1:0,4:4:12.04:244,12,0
chr10	15885168	.	GC	G	4356.35	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-2.821;DP=504;FS=0.766;HRun=8;HaplotypeScore=70.2673;InbreedingCoeff=0.9631;MQ=79.67;MQ0=0;MQRankSum=-2.168;QD=23.68;ReadPosRankSum=2.331;VQSLOD=5.6688;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,132,1557	1/1:1,8:9:24.04:232,24,0	0/0:16,0:15:13.08:0,13,198	0/0:17,1:16:1.42:0,1,246	1/1:2,18:20:39.05:376,39,0	1/1:1,21:22:60.10:579,60,0	1/1:3,20:23:54.08:521,54,0	0/0:3,0:20:43.31:0,43,243	0/0:14,0:14:39.10:0,39,449	1/1:3,17:20:54.08:518,54,0	1/1:1,14:15:36.06:347,36,0	0/0:17,0:17:45.14:0,45,543	0/0:1,0:14:31.55:0,32,159	0/0:2,0:20:45.89:0,46,233	0/0:12,0:12:33.08:0,33,377	0/0:18,0:18:44.81:0,45,518	1/1:2,18:20:42.06:405,42,0	0/0:13,0:13:39.12:0,39,471	0/0:4,0:13:31.87:0,32,197	0/0:0,0:11:31.59:0,32,160	0/0:5,0:27:55.06:0,55,278	0/0:3,0:12:28.80:0,29,153	0/0:2,0:14:25.81:0,26,131	0/0:1,0:14:34.50:0,35,175	0/0:18,0:18:29.11:0,29,546	1/1:4,17:21:54.04:510,54,0	1/1:2,20:22:57.09:550,57,0	1/1:0,12:12:33.05:318,33,0
chr10	15885707	.	G	GGGAGGAAGA	15365.71	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=-6.405;DP=700;FS=2.643;HRun=0;HaplotypeScore=160.0258;InbreedingCoeff=0.9337;MQ=64.30;MQ0=2;MQRankSum=-10.562;QD=35.82;ReadPosRankSum=-0.638;VQSLOD=4.3830;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:21,17:42:36.12:1575,36,0	0/0:6,0:6:15.05:0,15,416	0/0:22,0:16:3.09:0,3,103	0/0:29,0:24:15.34:0,15,325	0/0:14,0:14:12.10:0,12,571	0/0:17,0:17:33.09:0,33,776	0/0:30,0:30:57.17:0,57,1383	1/1:23,0:23:21.06:533,21,0	1/1:8,17:32:30.10:1368,30,0	0/0:26,0:26:36.12:0,36,887	0/0:18,0:18:20.84:0,21,536	1/1:8,14:29:35.92:1642,36,0	1/1:7,16:25:39.13:1761,39,0	1/1:12,12:27:18.06:820,18,0	1/1:9,17:31:26.92:1186,27,0	1/1:6,10:20:20.75:958,21,0	0/0:38,0:38:63.22:0,63,1708	1/1:12,7:24:9.03:406,9,0	1/1:15,11:31:53.92:1210,54,0	1/1:10,8:19:18.02:555,18,0	1/1:36,0:36:36.09:670,36,0	1/1:9,13:23:30.10:1178,30,0	1/1:5,9:18:15.05:684,15,0	1/1:15,12:32:8.71:410,9,0	1/1:8,6:16:9.03:411,9,0	0/0:30,0:30:54.16:0,54,1224	0/0:33,0:33:57.15:0,57,1276	0/0:8,0:8:15.05:0,15,246
chr10	15889307	.	C	CT	368.97	PASS	AB=1.000;AC=25;AF=0.543;AN=46;BaseQRankSum=-0.064;DP=130;FS=4.222;HRun=1;HaplotypeScore=36.1444;InbreedingCoeff=0.4288;MQ=107.36;MQ0=1;MQRankSum=-2.957;QD=7.53;ReadPosRankSum=-3.020;VQSLOD=-0.2631;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:6:2.60:0,3,6	1/1:1,0:1:3:25,3,0	0/0:27,0:18:19.66:0,20,325	0/0:26,0:21:46.99:0,47,436	./.	0/0:4,0:4:0.47:0,0,1	1/1:8,0:8:5.15:49,5,0	1/1:5,0:5:6.01:55,6,0	0/0:3,0:2:0:0,0,0	1/1:2,0:2:3:29,3,0	./.	0/0:3,0:3:0:0,0,0	./.	1/1:5,0:5:2.99:25,3,0	0/0:1,0:1:0:0,0,0	0/0:3,0:2:2.29:0,2,6	1/1:3,5:8:5.13:57,5,0	1/1:1,0:1:2.99:23,3,0	1/1:5,0:5:14.78:101,15,0	1/1:3,0:3:6.47:52,6,0	1/1:3,0:3:3.47:26,3,0	0/0:2,0:2:0.89:0,1,2	0/1:2,0:2:0:0,0,0	0/0:3,0:3:0.47:0,0,1	./.	1/1:2,0:2:3:28,3,0	1/1:4,0:4:2.88:15,3,0	./.
chr10	15889313	.	CCCCT	C	294.29	PASS	AB=1.000;AC=30;AF=0.682;AN=44;BaseQRankSum=-3.919;DP=139;FS=4.854;HRun=0;HaplotypeScore=29.4752;InbreedingCoeff=0.4030;MQ=92.73;MQ0=2;MQRankSum=-3.551;QD=4.46;ReadPosRankSum=-2.658;VQSLOD=-0.2753;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:5,1:6:11.53:62,12,0	./.	0/0:29,0:18:21.05:0,21,371	0/0:23,0:16:30.48:0,30,532	./.	1/1:4,0:4:2.88:15,3,0	0/0:7,0:7:0.68:0,1,1	1/1:4,1:5:2.98:22,3,0	1/1:6,0:5:2.88:27,3,0	1/1:4,0:4:8.97:69,9,0	./.	1/1:4,0:4:1.55:4,2,0	./.	1/1:3,1:4:3.90:20,4,0	0/0:2,0:2:0:0,0,0	1/1:3,0:2:2.70:7,3,0	0/1:9,0:9:0.58:1,0,6	1/1:1,0:1:2.98:22,3,0	1/1:2,1:3:8.97:104,9,0	0/0:1,0:1:1.25:0,1,3	1/1:3,0:3:2.60:19,3,0	1/1:2,0:2:0.32:1,0,0	1/1:0,5:5:2.98:22,3,0	0/0:6,0:6:0.47:0,0,1	0/1:3,0:3:0:0,0,0	./.	1/1:4,0:4:2.83:14,3,0	./.
chr10	15889314	.	CCCT	C	467.13	PASS	AC=34;AF=0.773;AN=44;BaseQRankSum=-4.214;DP=148;FS=6.646;HRun=0;HaplotypeScore=29.5954;InbreedingCoeff=0.3794;MQ=92.63;MQ0=2;MQRankSum=-3.253;QD=6.07;ReadPosRankSum=-3.137;VQSLOD=0.0376;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,0:7:11.58:66,12,0	./.	0/0:30,0:18:20.59:0,21,314	0/0:25,0:17:29.11:0,29,418	./.	1/1:4,0:4:2.90:16,3,0	1/1:6,0:6:2.43:13,2,0	1/1:5,0:5:2.98:22,3,0	1/1:6,0:5:2.86:27,3,0	1/1:0,4:4:8.97:69,9,0	./.	1/1:4,0:4:3:27,3,0	./.	1/1:4,0:4:2.44:18,2,0	0/0:2,0:2:0:0,0,0	1/1:4,0:3:6.06:33,6,0	1/1:9,0:9:2.61:54,3,0	1/1:1,0:1:2.98:22,3,0	1/1:1,2:3:8.99:99,9,0	0/0:1,0:1:0.89:0,1,2	1/1:4,0:4:5.17:39,5,0	1/1:3,0:3:0.37:1,0,0	1/1:5,0:5:3:26,3,0	0/0:7,0:7:0.47:0,0,1	1/1:3,0:3:1.55:4,2,0	./.	1/1:5,0:5:5.95:45,6,0	./.
chr10	15889316	.	CT	C	646.76	PASS	AB=1.000;AC=35;AF=0.795;AN=44;BaseQRankSum=-3.710;DP=165;FS=6.167;HRun=1;HaplotypeScore=30.2585;InbreedingCoeff=0.3705;MQ=83.93;MQ0=3;MQRankSum=-3.034;QD=6.88;ReadPosRankSum=-2.512;VQSLOD=-0.3383;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,0:12:20.74:143,21,0	./.	0/0:27,0:14:12.15:0,12,208	0/0:25,1:18:8.86:0,9,231	./.	1/1:0,5:5:2.96:19,3,0	1/1:6,1:7:5.94:44,6,0	1/1:6,0:6:2.98:22,3,0	1/1:6,0:5:3:27,3,0	1/1:4,0:4:8.97:69,9,0	./.	1/1:6,0:6:3:27,3,0	./.	1/1:1,3:4:2.25:17,2,0	0/1:2,0:2:0:0,0,0	1/1:3,1:3:5.80:34,6,0	1/1:9,0:9:5.44:68,5,0	1/1:1,0:1:2.98:22,3,0	1/1:3,0:3:8.95:68,9,0	0/0:2,0:2:1.76:0,2,5	1/1:6,0:6:8.12:60,8,0	1/1:4,0:4:2.81:24,3,0	1/1:5,0:5:2.96:19,3,0	0/0:0,8:8:0.47:0,0,1	1/1:4,0:4:3:27,3,0	./.	1/1:5,1:6:8.95:70,9,0	./.
chr10	15889819	.	T	TTTTTTG	6295	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-8.635;DP=619;FS=18.639;HRun=0;HaplotypeScore=115.2062;InbreedingCoeff=0.9509;MQ=64.88;MQ0=8;MQRankSum=-7.491;QD=37.03;ReadPosRankSum=-0.859;VQSLOD=3.3080;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:78.42:0,78,1919	1/1:1,4:5:9.03:230,9,0	0/0:42,0:28:46.53:0,47,671	0/0:22,0:14:21.06:0,21,294	1/1:7,11:19:24.08:639,24,0	1/1:3,12:15:21.07:683,21,0	1/1:5,15:22:21.07:684,21,0	0/0:32,0:32:66.19:0,66,1022	0/0:25,0:25:57.11:0,57,1042	1/1:7,13:20:33.11:753,33,0	1/1:4,6:9:15.05:427,15,0	0/0:25,0:25:54.15:0,54,986	0/0:27,0:27:60.21:0,60,1222	0/0:11,0:11:30.10:0,30,604	0/0:22,0:22:48.15:0,48,916	0/0:31,0:31:75.24:0,75,1339	1/1:11,11:22:9.03:293,9,0	0/0:28,0:28:69.20:0,69,1306	0/0:25,0:25:39.13:0,39,697	0/0:16,0:16:36.07:0,36,607	0/0:34,0:34:60.18:0,60,1106	0/0:14,0:14:24.07:0,24,430	0/0:11,0:11:27.09:0,27,541	0/0:32,0:32:78.24:0,78,1506	0/0:12,0:12:30.05:0,30,529	1/1:12,18:31:60.17:1511,60,0	1/1:5,13:18:30.10:977,30,0	1/1:3,2:5:3.01:98,3,0
chr10	15890139	.	CT	C	944.41	PASS	AB=1.000;AC=41;AF=0.891;AN=46;BaseQRankSum=-1.079;DP=121;FS=7.104;HRun=1;HaplotypeScore=23.9769;InbreedingCoeff=0.2851;MQ=54.23;MQ0=0;MQRankSum=-0.249;QD=8.59;ReadPosRankSum=0.979;VQSLOD=0.7363;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,0:4:8.04:41,8,0	1/1:5,0:5:8.42:59,8,0	0/0:4,0:4:0.81:0,1,2	0/1:4,0:3:0.81:6,0,1	1/1:2,0:2:2.96:19,3,0	./.	1/1:14,1:14:19.97:154,20,0	./.	1/1:8,0:8:14.24:71,14,0	1/1:1,0:1:2.74:12,3,0	./.	1/1:8,0:8:15.24:70,15,0	1/1:2,0:2:2.88:15,3,0	1/1:6,2:8:5.10:24,5,0	1/1:7,1:7:20.22:123,20,0	1/1:4,2:6:16.55:98,17,0	1/1:4,0:4:9.68:50,10,0	./.	1/1:1,0:1:2.04:6,2,0	0/0:3,0:3:2.71:0,3,19	1/1:6,0:5:5.48:31,5,0	./.	1/1:1,0:1:0.47:1,0,0	1/1:3,0:3:5.12:23,5,0	1/1:8,1:9:7.88:55,8,0	1/1:7,0:7:1.77:68,2,0	1/1:6,0:6:17.37:96,17,0	1/1:1,0:1:2.84:14,3,0
chr10	15891908	.	TG	T	20308.07	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-1.534;DP=618;FS=4.498;HRun=2;HaplotypeScore=68.2572;InbreedingCoeff=0.9798;MQ=91.02;MQ0=0;MQRankSum=-11.140;QD=35.69;ReadPosRankSum=6.728;VQSLOD=4.8448;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:0,44:44:99:1672,129,0	1/1:0,6:6:12.04:156,12,0	0/0:24,0:24:66.21:0,66,963	0/0:25,0:25:69.16:0,69,954	1/1:0,17:17:45.14:578,45,0	1/1:0,24:24:72.23:935,72,0	1/1:0,26:26:78.25:1013,78,0	1/1:2,18:20:48.16:623,48,0	1/1:0,16:16:45.15:584,45,0	1/1:1,20:21:60.17:761,60,0	1/1:0,19:19:54.18:700,54,0	1/1:1,19:20:54.15:683,54,0	1/1:1,23:24:57.18:739,57,0	1/1:0,17:17:45.15:584,45,0	1/1:0,25:25:72.23:935,72,0	1/1:1,15:16:42.14:545,42,0	1/1:0,37:37:99:1363,105,0	1/1:0,36:36:99:1324,102,0	1/1:0,16:16:48.16:621,48,0	1/1:0,20:20:54.18:700,54,0	1/1:0,36:36:93.30:1207,93,0	1/1:0,9:9:27.09:351,27,0	1/1:0,15:15:42.13:540,42,0	1/1:0,27:27:72.23:935,72,0	1/1:0,25:25:66.21:857,66,0	1/1:2,22:24:69.22:888,69,0	1/1:1,22:23:60.19:779,60,0	1/1:0,6:6:18.06:234,18,0
chr10	15893024	.	G	GA	4592.94	PASS	AB=0.909;AC=15;AF=0.268;AN=56;BaseQRankSum=-13.274;DP=683;FS=5.312;HRun=9;HaplotypeScore=64.9019;InbreedingCoeff=0.8721;MQ=73.38;MQ0=0;MQRankSum=-1.655;QD=21.77;ReadPosRankSum=0.799;VQSLOD=5.7925;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,39:42:93.25:1022,93,0	0/0:10,0:10:23.98:0,24,208	0/0:18,0:17:1.90:0,2,154	0/0:9,0:9:14.97:0,15,126	0/0:25,0:25:56.94:0,57,490	0/0:24,0:24:23.78:0,24,431	0/1:18,2:20:12.40:12,0,357	0/0:27,0:27:68.72:0,69,582	1/1:2,16:18:16.07:405,16,0	0/0:26,0:26:65.97:0,66,573	0/0:21,1:22:17.76:0,18,377	1/1:2,19:21:28.04:524,28,0	0/0:23,0:23:62.94:0,63,540	0/0:30,0:30:86.98:0,87,755	1/1:7,31:38:58.27:870,58,0	1/1:4,25:30:42.96:685,43,0	0/0:40,0:40:99:0,105,903	1/1:5,17:22:47.96:512,48,0	0/0:26,0:26:68.98:0,69,599	0/0:17,0:17:44.98:0,45,390	0/0:35,1:37:58.83:0,59,728	0/0:33,0:33:47.96:0,48,644	0/0:27,0:27:56.93:0,57,494	0/0:30,0:30:86.98:0,87,755	1/1:4,16:20:53.16:562,53,0	0/0:19,0:19:38.97:0,39,338	0/0:22,0:22:59.97:0,60,521	0/0:7,0:7:21:0,21,182
chr10	15895435	.	TTCTGC	T	22596.68	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-0.069;DP=584;FS=4.953;HRun=0;HaplotypeScore=129.7527;InbreedingCoeff=0.9590;MQ=85.88;MQ0=0;MQRankSum=-10.148;QD=42.08;ReadPosRankSum=5.632;VQSLOD=4.8107;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,48:55:99:2373,126,0	1/1:1,6:7:15.01:272,15,0	0/0:26,0:26:63.22:0,63,1832	0/0:21,0:20:56.83:0,57,1411	1/1:2,12:14:21.07:415,21,0	1/1:1,19:20:42.14:881,42,0	1/1:3,21:24:45.08:828,45,0	1/1:3,32:35:90.23:1674,90,0	1/1:3,13:16:35.90:579,36,0	1/1:4,17:21:48.15:954,48,0	1/1:1,9:10:24.04:437,24,0	1/1:0,21:21:54.07:1044,54,0	1/1:1,17:18:39.06:771,39,0	1/1:2,17:19:35.65:624,36,0	1/1:1,22:23:60.07:1168,60,0	1/1:2,16:18:30.07:587,30,0	1/1:3,29:32:71.35:1486,71,0	1/1:1,19:20:45.15:944,45,0	1/1:2,13:15:39.13:796,39,0	1/1:0,10:10:29.87:405,30,0	1/1:7,33:40:74.88:1361,75,0	1/1:0,13:13:29.93:537,30,0	1/1:1,17:18:41.84:652,42,0	1/1:2,22:24:45.15:896,45,0	1/1:1,20:21:41.90:680,42,0	1/1:1,22:23:66.14:1226,66,0	1/1:0,15:15:39.13:818,39,0	1/1:1,4:5:9.03:189,9,0
chr10	15895995	.	ATTT	A	5627.40	PASS	AB=1.000;AC=41;AF=0.732;AN=56;BaseQRankSum=7.660;DP=368;FS=12.132;HRun=6;HaplotypeScore=146.6806;InbreedingCoeff=0.3121;MQ=61.15;MQ0=1;MQRankSum=-6.280;QD=17.81;ReadPosRankSum=6.541;VQSLOD=0.7991;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,14:15:36.74:436,37,0	1/1:1,4:5:14.89:144,15,0	0/0:13,0:12:27.08:0,27,454	0/0:14,0:10:21.07:0,21,354	1/1:5,13:18:34.34:393,34,0	1/1:10,11:21:59.79:581,60,0	1/1:6,10:16:38.74:373,39,0	0/1:22,0:21:9.17:9,0,129	1/1:6,1:6:12.01:137,12,0	1/1:10,13:23:1.50:589,1,0	1/1:4,8:12:23.96:260,24,0	1/1:5,4:8:17.99:248,18,0	0/1:7,0:7:16.77:30,0,17	0/1:11,0:11:20.26:20,0,44	1/1:4,6:9:25.99:255,26,0	1/1:6,3:9:23.94:266,24,0	1/1:11,8:18:44.85:465,45,0	1/1:2,3:3:8.98:104,9,0	0/0:18,0:17:0.43:0,0,136	0/1:14,0:13:8.54:9,0,15	0/0:7,0:7:9.84:0,10,89	0/1:6,0:6:7.34:7,0,19	0/1:20,0:19:26.87:27,0,60	0/1:14,0:13:9.98:10,0,51	1/1:12,6:18:45.40:437,45,0	1/1:10,7:17:47.79:457,48,0	1/1:4,4:8:20.95:209,21,0	1/1:4,3:7:14.96:160,15,0
chr10	15896001	.	TA	T	3621.48	PASS	AB=0.904;AC=45;AF=0.804;AN=56;BaseQRankSum=0.227;DP=425;FS=1.912;HRun=1;HaplotypeScore=163.2853;InbreedingCoeff=0.1914;MQ=48.50;MQ0=6;MQRankSum=-1.060;QD=8.99;ReadPosRankSum=6.250;VQSLOD=1.4238;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:16:27.59:175,28,0	1/1:9,0:9:2.90:33,3,0	0/0:10,0:9:20.98:0,21,252	0/0:12,0:8:20.72:0,21,236	0/1:25,0:24:8.87:85,0,9	1/1:20,0:20:33.53:211,34,0	1/1:15,0:15:9.31:91,9,0	0/1:20,8:24:4.17:208,0,4	1/1:6,2:7:11.94:92,12,0	0/1:25,0:26:17.26:203,0,17	0/1:17,0:15:11.92:44,0,12	1/1:9,0:7:15.10:90,15,0	1/1:8,3:10:14.15:149,14,0	1/1:10,6:16:28.16:212,28,0	1/1:12,0:9:14.42:103,14,0	1/1:11,0:10:23.98:152,24,0	1/1:21,0:20:22.52:190,23,0	1/1:12,0:9:8.94:66,9,0	1/1:17,5:20:6.65:224,7,0	0/1:8,8:16:21.91:157,0,22	1/1:5,2:7:11.43:72,11,0	1/1:1,4:5:8.94:66,9,0	1/1:8,11:19:27.08:327,27,0	1/1:7,8:13:25.77:192,26,0	0/1:17,1:18:1.62:214,0,2	0/1:24,0:24:10.22:117,0,10	1/1:8,0:8:10.65:71,11,0	1/1:5,0:5:14.08:77,14,0
chr10	15896005	.	TA	T	3787.47	PASS	AB=0.705;AC=44;AF=0.786;AN=56;BaseQRankSum=0.255;DP=428;FS=1.216;HRun=1;HaplotypeScore=154.2468;InbreedingCoeff=0.1157;MQ=35.36;MQ0=9;MQRankSum=-1.952;QD=9.22;ReadPosRankSum=3.908;VQSLOD=1.5014;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,14:17:38.44:387,38,0	1/1:5,5:10:0.29:46,0,0	0/0:6,0:5:15.05:0,15,228	0/0:11,0:6:17.89:0,18,207	0/1:11,13:23:6.23:96,0,6	1/1:8,10:19:24.85:178,25,0	0/1:8,9:18:25.02:75,0,25	1/1:18,10:23:11.72:238,12,0	1/1:4,2:5:8.92:73,9,0	0/1:13,13:26:40.26:186,0,40	0/1:9,7:14:7:53,0,7	1/1:5,4:6:14.30:121,14,0	1/1:9,1:10:16.69:159,17,0	1/1:12,4:17:27.20:188,27,0	1/1:5,6:8:19.84:179,20,0	1/1:6,4:9:23.82:218,24,0	0/1:15,7:19:4.44:96,0,4	1/1:8,5:9:8.98:86,9,0	1/1:14,6:18:15.85:185,16,0	0/1:12,6:18:9.75:114,0,10	1/1:6,2:8:14.85:101,15,0	1/1:1,3:4:8.85:56,9,0	1/1:14,9:21:29.16:281,29,0	1/1:9,6:12:20.67:153,21,0	0/1:14,6:20:17.48:303,0,17	0/1:15,8:22:39.71:88,0,40	1/1:5,4:8:6.81:71,7,0	1/1:2,3:4:11.21:55,11,0
chr10	15896008	.	TTATTTA	T	9224.83	PASS	AB=0.981;AC=50;AF=0.893;AN=56;BaseQRankSum=2.674;DP=436;FS=10.601;HRun=0;HaplotypeScore=166.3188;InbreedingCoeff=0.5241;MQ=32.43;MQ0=11;MQRankSum=-3.445;QD=22.07;ReadPosRankSum=1.187;VQSLOD=4.0488;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:18:31.88:279,32,0	1/1:10,0:10:18.51:279,19,0	0/0:6,0:5:15.05:0,15,429	0/0:12,0:5:14.92:0,15,340	1/1:23,1:23:53.79:717,54,0	1/1:20,0:20:37.05:638,37,0	1/1:19,0:19:37.20:573,37,0	1/1:27,3:25:47.09:465,47,0	1/1:5,0:4:5.97:49,6,0	0/1:24,1:25:23.33:884,0,23	1/1:17,0:15:35.03:467,35,0	1/1:9,0:6:10.37:94,10,0	1/1:11,0:10:22.23:248,22,0	1/1:18,0:17:27.95:384,28,0	1/1:12,0:9:9.29:123,9,0	1/1:10,0:9:19.74:151,20,0	1/1:22,0:18:37.64:615,38,0	1/1:13,0:9:8.96:72,9,0	1/1:20,1:19:26.62:351,27,0	1/1:19,0:17:23.93:329,24,0	1/1:8,0:8:11.89:112,12,0	1/1:6,0:5:11.91:187,12,0	1/1:21,2:20:36.38:537,36,0	1/1:16,0:12:20.96:315,21,0	0/1:20,0:20:81.37:171,0,81	1/1:24,0:22:51.63:621,52,0	1/1:9,0:8:20.28:333,20,0	1/1:5,0:4:12.04:233,12,0
chr10	15896009	.	TATTTA	T	7696.21	PASS	AB=0.754;AC=50;AF=0.893;AN=56;BaseQRankSum=3.558;DP=408;FS=5.781;HRun=0;HaplotypeScore=155.2473;InbreedingCoeff=0.5429;MQ=32.35;MQ0=11;MQRankSum=-1.388;QD=19.73;ReadPosRankSum=1.777;VQSLOD=4.2635;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:18:40.88:412,41,0	1/1:2,4:9:16.80:177,17,0	0/0:6,0:5:15.05:0,15,395	0/0:12,0:5:14.69:0,15,285	1/1:4,12:23:44.92:400,45,0	1/1:3,10:15:34.90:442,35,0	1/1:4,9:16:34.84:396,35,0	1/1:21,5:21:42.90:466,43,0	1/1:4,0:4:5.98:59,6,0	0/1:5,12:24:13.12:608,0,13	1/1:2,7:15:24.85:247,25,0	1/1:9,0:6:14.63:164,15,0	1/1:10,1:10:20.84:229,21,0	1/1:13,3:16:26.47:341,26,0	1/1:10,0:9:23.09:264,23,0	1/1:10,0:9:23.48:223,23,0	1/1:10,7:17:37.85:433,38,0	1/1:13,0:9:8.99:95,9,0	1/1:11,4:13:24.22:342,24,0	1/1:14,5:17:18.51:291,19,0	1/1:5,2:7:11.89:109,12,0	1/1:3,3:5:12.02:169,12,0	1/1:16,7:20:34.74:492,35,0	1/1:10,5:12:20.60:298,21,0	0/1:18,0:19:56.60:264,0,57	1/1:2,7:18:40.62:380,41,0	1/1:2,4:8:18.87:223,19,0	1/1:2,3:4:12.04:170,12,0
chr10	15896013	.	TA	T	4583.41	PASS	AB=0.971;AC=50;AF=0.893;AN=56;BaseQRankSum=4.062;DP=420;FS=0.835;HRun=1;HaplotypeScore=146.3525;InbreedingCoeff=0.4941;MQ=30.52;MQ0=13;MQRankSum=-1.738;QD=11.40;ReadPosRankSum=2.692;VQSLOD=3.3825;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:17:35.82:370,36,0	1/1:11,2:13:15.94:94,16,0	0/0:6,0:4:12.02:0,12,159	0/0:12,0:5:9.43:0,9,113	1/1:18,8:25:40.12:270,40,0	1/1:13,2:15:31.54:187,32,0	1/1:13,3:16:35.42:218,35,0	1/1:27,0:22:14.41:271,14,0	1/1:4,1:4:5.98:55,6,0	1/1:22,6:28:49.80:378,50,0	1/1:10,7:15:27.65:188,28,0	1/1:9,0:6:14.30:121,14,0	1/1:9,0:8:10.46:87,10,0	1/1:16,0:15:22.58:156,23,0	1/1:11,0:8:21.31:195,21,0	1/1:9,0:8:20.97:200,21,0	1/1:17,4:17:24.24:231,24,0	1/1:13,0:9:8.98:85,9,0	1/1:15,0:13:10.15:170,10,0	0/1:20,0:18:10.32:106,0,10	1/1:8,0:6:8.91:62,9,0	1/1:6,0:5:11.90:86,12,0	1/1:23,0:20:17.55:186,18,0	1/1:15,1:11:19.77:116,20,0	0/1:15,1:16:28.87:219,0,29	1/1:13,10:21:52.86:345,53,0	1/1:8,3:10:20.11:117,20,0	1/1:8,0:7:11.60:68,12,0
chr10	15896023	.	C	CTTT	6318.36	PASS	AB=0.929;AC=52;AF=0.929;AN=56;BaseQRankSum=-0.928;DP=495;FS=2.069;HRun=10;HaplotypeScore=173.8695;InbreedingCoeff=0.2790;MQ=30.67;MQ0=16;MQRankSum=0.231;QD=12.76;ReadPosRankSum=-1.732;VQSLOD=1.0571;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:18,5:20:17.97:238,18,0	1/1:8,9:17:15.03:216,15,0	0/1:5,0:3:0:0,0,0	0/1:10,0:3:0:0,0,0	1/1:16,10:27:16.77:292,17,0	1/1:6,11:20:33.06:514,33,0	1/1:9,7:16:18.06:334,18,0	1/1:21,7:24:25.40:409,25,0	1/1:3,5:7:6.02:115,6,0	1/1:18,10:31:15.66:638,16,0	1/1:8,7:16:24.02:369,24,0	1/1:11,2:10:8.99:135,9,0	1/1:9,0:8:5.83:34,6,0	1/1:14,2:16:5.97:68,6,0	1/1:5,8:10:15.52:281,16,0	1/1:6,4:9:6.02:113,6,0	1/1:13,5:18:7.37:238,7,0	1/1:14,1:10:1.25:3,1,0	1/1:11,3:14:9.01:123,9,0	1/1:16,9:26:14.90:140,15,0	0/1:9,0:7:0:0,0,0	1/1:5,3:8:3.01:57,3,0	1/1:16,9:25:20.94:288,21,0	1/1:12,3:12:10.47:84,10,0	0/1:12,6:20:16.92:232,0,17	1/1:13,13:27:49.34:797,49,0	1/1:6,10:16:24.04:360,24,0	1/1:2,9:14:6.89:238,7,0
chr10	15896696	.	ATTTTT	A	7500.54	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=-3.304;DP=526;FS=2.964;HRun=16;HaplotypeScore=161.6711;InbreedingCoeff=0.9904;MQ=57.15;MQ0=4;MQRankSum=-10.501;QD=25.17;ReadPosRankSum=4.518;VQSLOD=2.3091;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,22:29:27.24:680,27,0	0/0:3,0:8:22.80:0,23,154	0/0:24,0:8:18.02:0,18,338	0/0:18,0:12:19.30:0,19,244	0/0:10,0:29:50.33:0,50,401	0/0:5,0:15:27.80:0,28,217	0/0:5,0:20:29.24:0,29,192	1/1:5,17:23:21.57:778,22,0	1/1:3,7:12:20.43:289,20,0	0/0:6,0:25:33.35:0,33,300	0/0:4,0:16:36.59:0,37,218	1/1:4,14:20:28.89:470,29,0	1/1:3,14:17:32.88:513,33,0	1/1:1,15:16:29.93:467,30,0	1/1:5,14:20:32.38:474,32,0	1/1:2,19:22:53.56:822,54,0	0/0:3,0:23:32.42:0,32,176	1/1:7,10:18:23.40:324,23,0	1/1:3,8:11:23.96:366,24,0	1/1:9,10:19:26.53:419,27,0	1/1:7,6:14:14.93:213,15,0	1/1:10,11:22:23.04:313,23,0	1/1:6,13:21:29.70:449,30,0	1/1:2,11:14:20.98:314,21,0	1/1:4,16:20:38.96:607,39,0	0/0:9,0:23:19.53:0,20,254	0/0:3,1:18:38.75:0,39,210	0/0:2,0:9:22.01:0,22,107
chr10	15897549	.	CTGTG	C	2754.88	PASS	AB=0.585;AC=34;AF=0.654;AN=52;BaseQRankSum=-1.733;DP=556;FS=15.793;HRun=0;HaplotypeScore=112.9403;InbreedingCoeff=0.6271;MQ=75.94;MQ0=22;MQRankSum=-3.746;QD=10.24;ReadPosRankSum=3.216;VQSLOD=2.0139;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	1/1:1,6:7:5.98:71,6,0	0/0:68,0:24:37.20:0,37,687	0/0:82,0:45:77.54:0,78,1328	1/1:8,8:16:17.93:211,18,0	1/1:0,17:17:8.93:63,9,0	1/1:19,3:22:16.12:593,16,0	0/0:13,0:36:60.52:0,61,268	1/1:11,0:11:8.94:91,9,0	1/1:5,10:14:33.11:542,33,0	1/1:1,5:6:5.93:40,6,0	1/1:15,5:20:32.95:441,33,0	1/1:21,0:21:2.65:31,3,0	0/1:10,0:23:21.71:47,0,22	1/1:9,0:9:2.96:20,3,0	1/1:13,1:14:6.02:98,6,0	1/1:8,10:18:9.03:152,9,0	1/1:18,0:18:3.01:51,3,0	0/0:11,1:10:5.74:0,6,37	0/0:13,0:13:15.43:0,15,92	0/0:13,0:35:4.08:0,4,147	0/0:7,0:9:8.04:0,8,39	0/0:14,0:14:7.92:0,8,41	0/1:2,0:14:0:0,0,0	1/1:10,0:11:2.97:20,3,0	1/1:6,6:10:15.05:257,15,0	1/1:7,7:13:12.04:202,12,0	./.
chr10	15897562	.	TGTGTTGTG	T	2126.94	PASS	AB=0.938;AC=26;AF=0.481;AN=54;BaseQRankSum=-1.945;DP=610;FS=20.955;HRun=0;HaplotypeScore=140.1540;InbreedingCoeff=0.0934;MQ=61.27;MQ0=52;MQRankSum=-3.154;QD=6.84;ReadPosRankSum=2.880;VQSLOD=1.1213;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:18:0.47:0,0,1	0/1:9,0:8:16.74:17,0,27	0/0:64,0:19:37.20:0,37,682	0/0:68,0:32:74.85:0,75,1313	0/1:13,0:15:13.51:44,0,14	1/1:21,0:20:7.90:61,8,0	0/1:19,0:22:99:399,0,115	0/0:32,0:29:59.12:0,59,266	1/1:6,10:17:8.09:109,8,0	0/1:15,0:15:87.06:384,0,87	1/1:11,0:10:5.74:39,6,0	1/1:19,1:21:33.42:442,33,0	0/1:23,0:21:18.90:19,0,56	0/1:21,0:20:11.73:12,0,52	1/1:4,9:11:2.96:20,3,0	1/1:7,0:15:11.63:201,12,0	0/1:19,0:16:33.48:57,0,33	1/1:6,13:19:9.01:113,9,0	0/0:8,0:5:11.59:0,12,71	0/0:16,0:14:28.66:0,29,139	0/0:46,0:38:0.44:0,0,232	0/1:15,0:13:5.65:6,0,31	0/0:17,0:15:8.72:0,9,41	0/0:21,0:21:4.31:0,4,26	1/1:6,8:13:2.96:20,3,0	0/1:18,0:12:99:161,0,239	0/1:13,0:12:33.85:192,0,34	./.
chr10	15897564	.	TGTTG	T	2470.65	PASS	AB=0.994;AC=33;AF=0.611;AN=54;BaseQRankSum=-1.341;DP=606;FS=13.100;HRun=0;HaplotypeScore=121.5486;InbreedingCoeff=0.2702;MQ=57.32;MQ0=54;MQRankSum=0.432;QD=6.12;ReadPosRankSum=5.054;VQSLOD=1.5540;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:18:0:0,0,0	0/0:9,0:8:3.42:0,3,34	0/0:59,0:14:13.11:0,13,338	0/0:62,0:28:59.50:0,60,675	1/1:15,0:15:0.85:5,1,0	0/0:22,0:20:0.64:0,1,2	1/1:27,0:23:15.91:143,16,0	1/1:32,0:29:75.09:848,75,0	1/1:17,0:17:2.92:18,3,0	0/1:17,0:16:31.17:110,0,31	0/1:11,0:10:0.13:0,0,0	1/1:22,0:21:19.90:103,20,0	1/1:6,17:21:9.88:95,10,0	1/1:20,0:19:8.27:116,8,0	0/1:13,0:11:0:0,0,0	1/1:14,0:15:11.88:97,12,0	0/1:21,0:16:6:28,0,6	1/1:19,0:19:6.28:33,6,0	0/1:7,0:4:4.97:30,0,5	1/1:15,0:13:29.02:366,29,0	0/1:47,0:38:99:194,0,109	1/1:16,0:14:17.38:240,17,0	1/1:4,13:15:8.52:60,9,0	0/0:21,0:21:0.46:0,0,1	0/1:15,0:14:0.34:0,0,0	0/1:20,0:12:48.75:49,0,85	0/1:14,0:12:1.60:76,0,2	./.
chr10	15897566	.	T	TG	410.83	PASS	AB=0.986;AC=19;AF=0.352;AN=54;BaseQRankSum=2.135;DP=617;FS=3.863;HRun=1;HaplotypeScore=123.2951;InbreedingCoeff=0.0764;MQ=55.03;MQ0=58;MQRankSum=-0.737;QD=1.40;ReadPosRankSum=3.473;VQSLOD=-0.6625;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:21,1:18:0.47:0,0,1	0/0:9,0:8:2.04:0,2,15	0/0:58,0:14:32.63:0,33,343	0/0:61,0:25:62.05:0,62,711	0/1:15,0:15:6.20:27,0,6	0/0:22,0:20:0.47:0,0,1	1/1:26,1:23:40.51:193,41,0	0/0:32,0:29:14.16:0,14,209	1/1:17,0:17:2.67:11,3,0	0/1:19,0:17:66.37:66,0,100	0/1:13,0:11:0.02:0,0,0	1/1:23,0:22:20.21:115,20,0	0/0:24,0:22:3.22:0,3,117	0/1:21,0:20:14.05:14,0,34	0/1:13,0:11:0.01:0,0,0	0/0:15,0:15:8.20:0,8,33	0/1:21,0:16:14.57:15,0,24	0/1:19,0:19:16.07:40,0,16	0/1:10,0:7:15.30:15,0,29	0/0:14,0:12:16.50:0,16,57	0/0:48,0:39:21.86:0,22,151	0/0:17,0:14:8.89:0,9,28	0/0:18,0:16:0.47:0,0,2	0/1:21,2:23:7.54:8,0,45	0/1:15,1:14:0.02:0,0,0	0/1:21,0:12:27.86:28,0,140	0/1:14,0:12:21.65:22,0,57	./.
chr10	15899985	.	GTAGATAGGGGAC	G	8185.51	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=12.865;DP=617;FS=9.846;HRun=0;HaplotypeScore=205.6760;InbreedingCoeff=0.9831;MQ=69.63;MQ0=0;MQRankSum=-13.613;QD=68.21;ReadPosRankSum=0.589;VQSLOD=3.5592;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,26:32:45.15:1592,45,0	0/0:8,0:8:15.05:0,15,920	0/0:16,0:16:48.16:0,48,2546	0/0:21,0:22:61.71:0,62,2393	0/0:23,0:23:60.21:0,60,3438	0/0:26,0:26:78.27:0,78,4590	0/0:27,0:27:81.25:0,81,4185	0/0:28,0:28:66.23:0,66,3327	1/1:3,19:22:51.18:1900,51,0	0/0:38,0:38:99:0,108,6073	0/0:13,0:13:33.10:0,33,1808	1/1:0,16:16:36.12:1341,36,0	0/0:23,0:23:63.22:0,63,3706	0/0:26,0:26:78.22:0,78,4225	1/1:1,15:16:42.14:1565,42,0	1/1:1,8:9:24.08:894,24,0	0/0:24,0:24:66.14:0,66,3651	1/1:1,17:18:15.05:559,15,0	0/0:20,0:20:54.17:0,54,2628	0/0:26,0:26:78.24:0,78,4386	0/0:38,0:38:99:0,114,5797	0/0:20,0:20:57.20:0,57,3422	0/0:24,0:24:69.22:0,69,4001	0/0:26,0:26:78.23:0,78,4336	1/1:1,6:7:9.03:335,9,0	0/0:20,0:20:57.17:0,57,3240	0/0:29,0:29:87.30:0,87,5155	0/0:20,0:20:60.19:0,60,3382
chr10	15900731	.	TC	T	7441.04	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=5.930;DP=576;FS=6.937;HRun=9;HaplotypeScore=67.1212;InbreedingCoeff=0.9732;MQ=78.00;MQ0=0;MQRankSum=-0.150;QD=19.63;ReadPosRankSum=1.188;VQSLOD=5.4807;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,108,1227	1/1:1,6:7:14.96:130,15,0	0/0:17,0:18:44.55:0,45,431	0/0:13,0:12:18.18:0,18,209	1/1:4,12:16:35.97:322,36,0	1/1:1,15:16:42.02:384,42,0	1/1:3,19:23:50.05:445,50,0	1/1:6,20:26:59.98:540,60,0	0/0:19,0:19:51.11:0,51,574	1/1:4,17:21:35.66:426,36,0	1/1:3,9:12:18.89:166,19,0	0/0:24,0:24:63.10:0,63,694	1/1:1,22:23:53.98:494,54,0	1/1:4,31:35:78.02:714,78,0	0/0:30,0:30:75.21:0,75,855	0/0:15,0:15:33.09:0,33,373	1/1:2,29:31:84.04:769,84,0	0/0:25,0:25:69.21:0,69,796	1/1:8,9:18:26.02:221,26,0	1/1:2,5:8:14.98:130,15,0	1/1:3,24:27:22.41:459,22,0	1/1:2,15:17:35.97:321,36,0	1/1:3,10:13:24.01:219,24,0	1/1:4,19:23:48.02:439,48,0	0/0:12,1:13:5.63:0,6,310	1/1:0,24:24:66.03:604,66,0	1/1:6,23:29:51:466,51,0	1/1:4,6:10:21.01:192,21,0
chr10	15900807	.	AG	A	6231.39	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=8.727;DP=613;FS=2.391;HRun=2;HaplotypeScore=66.9304;InbreedingCoeff=0.9866;MQ=89.98;MQ0=0;MQRankSum=-6.960;QD=37.09;ReadPosRankSum=7.749;VQSLOD=4.4097;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:0,44:44:99:1675,129,0	0/0:5,0:5:15.05:0,15,225	0/0:24,0:24:63.21:0,63,927	0/0:24,0:23:66.18:0,66,938	0/0:17,0:17:51.13:0,51,734	0/0:17,0:17:51.17:0,51,764	0/0:22,0:22:66.21:0,66,962	0/0:19,0:19:57.18:0,57,835	1/1:0,14:14:36.12:467,36,0	0/0:24,0:24:66.22:0,66,979	0/0:15,0:15:42.14:0,42,628	1/1:0,24:24:66.21:856,66,0	0/0:23,0:23:63.08:0,63,943	0/0:28,0:28:78.26:0,78,1169	1/1:0,30:30:87.28:1129,87,0	1/1:0,18:18:54.18:701,54,0	0/0:44,0:44:99:0,129,1888	1/1:0,22:22:63.13:818,63,0	0/0:18,0:18:51.17:0,51,763	0/0:16,0:16:48.15:0,48,698	0/0:37,0:37:96.30:0,96,1398	0/0:19,0:19:45.15:0,45,674	0/0:15,0:15:39.13:0,39,584	0/0:28,0:28:75.25:0,75,1108	1/1:0,16:16:45.15:584,45,0	0/0:18,0:18:51.17:0,51,759	0/0:29,0:29:75.24:0,75,1104	0/0:3,0:3:9.03:0,9,133
chr10	15902087	.	T	TG	18374.15	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-16.867;DP=719;FS=2.388;HRun=1;HaplotypeScore=63.6993;InbreedingCoeff=0.9916;MQ=88.91;MQ0=0;MQRankSum=-4.301;QD=41.48;ReadPosRankSum=3.102;VQSLOD=5.5260;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,46:48:99:2023,135,0	1/1:0,11:11:30.10:450,30,0	0/0:27,0:27:78.23:0,78,986	0/0:24,0:24:57.18:0,57,732	1/1:2,21:23:57.19:854,57,0	1/1:2,32:34:87.29:1304,87,0	1/1:0,35:35:96.33:1438,96,0	0/0:19,0:19:54.18:0,54,701	1/1:0,24:24:66.22:989,66,0	1/1:1,21:22:60.20:897,60,0	1/1:1,13:14:36.12:540,36,0	1/1:0,25:25:72.24:1079,72,0	0/0:24,0:24:69.22:0,69,895	0/0:28,0:28:78.25:0,78,1013	1/1:0,40:40:99:1709,114,0	1/1:0,29:29:84.28:1258,84,0	1/1:1,30:31:87.29:1304,87,0	1/1:1,17:18:51.17:764,51,0	0/0:21,0:21:63.20:0,63,818	0/0:23,0:23:57.17:0,57,724	0/0:29,0:29:81.23:0,81,1022	0/0:27,0:27:81.26:0,81,1051	0/0:28,0:28:78.24:0,78,993	0/0:26,0:26:78.25:0,78,1013	1/1:0,22:22:60.20:899,60,0	1/1:1,27:28:81.27:1206,81,0	1/1:0,35:36:99:1524,102,0	1/1:0,3:3:9.03:135,9,0
chr10	15903542	.	TGATG	T	6780.22	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=12.543;DP=653;FS=1.652;HRun=0;HaplotypeScore=129.2862;InbreedingCoeff=0.9977;MQ=84.56;MQ0=0;MQRankSum=-4.735;QD=41.34;ReadPosRankSum=3.347;VQSLOD=5.3514;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,45:48:99:1816,99,0	0/0:7,0:7:21.07:0,21,555	0/0:19,0:19:48.14:0,48,1102	0/0:23,0:23:66.13:0,66,1430	0/0:25,0:25:60.21:0,60,1499	0/0:23,0:23:63.20:0,63,1608	0/0:29,0:29:87.28:0,87,2225	0/0:27,0:27:66.17:0,66,1503	1/1:3,16:19:42.10:736,42,0	0/0:25,0:25:66.23:0,66,1707	0/0:9,0:9:24.07:0,24,566	1/1:3,23:26:66.18:1177,66,0	0/0:30,0:30:84.22:0,84,2041	0/0:20,0:20:57.20:0,57,1444	1/1:0,19:19:51.17:936,51,0	1/1:1,22:23:57.20:1048,57,0	0/0:31,0:31:83.84:0,84,2036	1/1:1,17:18:39.09:682,39,0	0/0:29,0:29:78.20:0,78,1797	0/0:15,0:15:39.12:0,39,917	0/0:52,0:52:99:0,141,3486	0/0:10,0:10:24.07:0,24,580	0/0:13,0:13:36.12:0,36,893	0/0:40,0:40:99:0,111,2812	1/1:2,9:11:21.07:386,21,0	0/0:28,0:28:75.24:0,75,1876	0/0:22,0:22:66.21:0,66,1672	0/0:12,0:12:33.11:0,33,871
chr10	15903883	.	AGTGTGT	A	997.88	PASS	AB=0.939;AC=24;AF=0.480;AN=50;BaseQRankSum=-1.862;DP=515;FS=6.723;HRun=0;HaplotypeScore=132.7683;InbreedingCoeff=-0.0987;MQ=53.62;MQ0=17;MQRankSum=-1.350;QD=2.74;ReadPosRankSum=-1.375;VQSLOD=1.8221;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:27:60.42:60,0,73	1/1:5,0:5:5.38:48,5,0	./.	./.	0/0:15,0:15:2.74:0,3,12	0/0:20,0:20:5.74:0,6,37	0/1:20,0:18:10.36:10,0,12	0/1:21,2:21:3.29:28,0,3	0/0:7,0:11:2.12:0,2,105	0/1:23,0:23:43.69:44,0,100	0/0:14,0:14:8.30:0,8,51	0/1:14,0:19:24.52:25,0,137	1/1:13,7:19:12.04:237,12,0	1/1:13,5:18:2.97:62,3,0	0/0:17,0:22:24.97:0,25,319	0/0:15,0:17:10.59:0,11,349	0/1:29,0:28:29:29,0,78	0/1:14,0:17:13.23:13,0,43	1/1:10,4:12:8.92:78,9,0	0/1:13,4:17:11.83:40,0,12	1/1:27,0:24:16.37:238,16,0	0/1:4,10:13:12.93:56,0,13	./.	1/1:9,21:29:3.01:42,3,0	0/1:24,0:23:24.94:25,0,110	0/1:16,0:16:37.15:37,0,105	0/1:17,0:18:29.58:81,0,30	0/0:11,0:11:8.55:0,9,34
chr10	15903912	.	GTGTGTGTGTCTGTGTGTC	G	1761.55	PASS	AB=0.977;AC=25;AF=0.481;AN=52;BaseQRankSum=1.825;DP=537;FS=23.509;HRun=0;HaplotypeScore=209.6164;InbreedingCoeff=-0.2652;MQ=47.25;MQ0=50;MQRankSum=0.108;QD=4.12;ReadPosRankSum=2.305;VQSLOD=1.1720;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:32,0:27:6.21:197,6,0	0/1:3,0:3:17.08:17,0,45	./.	./.	0/1:11,0:11:3.23:3,0,178	1/1:16,0:15:2.37:8,2,0	0/1:19,0:12:29.21:33,0,29	0/1:28,0:19:9.29:9,0,104	0/1:14,0:11:2.54:100,0,3	0/1:29,0:23:99:138,0,767	0/1:19,0:18:3.12:3,0,107	1/1:20,0:18:9.34:313,9,0	0/0:15,0:13:9.81:0,10,278	0/0:16,0:16:30.51:0,31,850	0/1:23,0:22:42.71:155,0,43	0/1:16,0:15:99:119,0,101	0/1:30,0:28:99:110,0,449	1/1:18,0:17:28.82:266,29,0	0/1:16,0:10:9.89:10,0,359	0/1:12,0:10:4.65:5,0,240	0/1:45,0:37:23.87:24,0,1674	0/0:24,0:21:27.02:0,27,782	0/0:16,0:14:12.04:0,12,367	0/0:33,0:32:24.03:0,24,536	0/1:8,15:20:38.01:194,0,38	0/1:26,0:23:35.36:35,0,554	0/1:17,0:16:48.06:48,0,81	0/1:11,0:11:99:130,0,123
chr10	15903916	.	GTGTGTC	G	2667.95	PASS	AB=0.994;AC=34;AF=0.654;AN=52;BaseQRankSum=6.009;DP=542;FS=6.464;HRun=0;HaplotypeScore=136.0735;InbreedingCoeff=-0.1008;MQ=47.45;MQ0=52;MQRankSum=1.876;QD=5.84;ReadPosRankSum=2.822;VQSLOD=2.0421;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:32,0:27:0.61:190,1,0	1/1:0,3:3:6.01:84,6,0	./.	./.	1/1:4,6:10:2.33:11,2,0	1/1:15,0:14:2.74:12,3,0	1/1:20,0:14:23.47:196,23,0	0/0:30,0:20:38.41:0,38,275	0/1:15,0:11:19.33:90,0,19	1/1:30,1:25:33.70:337,34,0	1/1:18,1:18:5.96:24,6,0	0/1:19,0:17:36.23:178,0,36	0/1:13,1:12:22.93:177,0,23	0/1:16,0:16:40.49:40,0,165	0/1:21,0:20:63.11:63,0,140	0/1:16,0:15:66.88:67,0,188	1/1:31,0:29:60.46:451,60,0	1/1:17,0:16:12.08:182,12,0	0/1:17,0:11:11.15:11,0,124	0/1:12,0:9:18.36:18,0,35	0/1:48,0:40:90.43:90,0,328	0/1:25,0:22:7.35:7,0,178	0/0:15,0:13:11.98:0,12,99	0/0:36,0:35:10.61:0,11,176	0/1:22,0:19:48.99:50,0,49	0/1:27,0:23:91.79:215,0,92	1/1:17,1:17:16.50:192,16,0	1/1:9,0:9:22.89:143,23,0
chr10	15903918	.	GTGTC	G	3144.07	PASS	AB=0.956;AC=31;AF=0.596;AN=52;BaseQRankSum=4.397;DP=544;FS=0.000;HRun=0;HaplotypeScore=123.5954;InbreedingCoeff=0.1170;MQ=47.57;MQ0=51;MQRankSum=0.547;QD=7.56;ReadPosRankSum=0.656;VQSLOD=2.6669;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:33,0:28:1.30:111,1,0	1/1:3,0:3:6:54,6,0	./.	./.	1/1:9,1:10:6:80,6,0	1/1:3,11:13:3.01:57,3,0	1/1:20,0:14:25.99:198,26,0	0/0:32,0:21:20.14:0,20,254	0/1:14,0:10:48.28:48,0,77	1/1:10,22:26:46.96:528,47,0	1/1:4,15:18:6.49:114,6,0	0/1:19,0:17:83.42:83,0,105	0/1:14,0:12:24.07:50,0,24	0/0:16,0:16:9.31:0,9,177	0/1:20,1:20:44.14:44,0,232	0/1:15,0:14:7:7,0,292	1/1:25,6:29:63.02:836,63,0	0/1:16,0:15:0.25:129,0,0	0/1:17,0:11:1.02:1,0,124	0/1:14,0:11:7.44:7,0,65	0/1:48,0:40:17.27:17,0,351	0/0:25,0:22:24.57:0,25,212	0/0:16,0:14:14.98:0,15,124	0/0:37,0:36:15.53:0,16,199	0/1:21,1:19:60.87:76,0,61	0/1:9,18:23:63.70:368,0,64	1/1:4,14:17:20.46:269,20,0	1/1:9,0:9:23.32:235,23,0
chr10	15904581	.	GAGGCGGA	G	1340.66	PASS	AB=0.929;AC=19;AF=0.339;AN=56;BaseQRankSum=1.110;DP=449;FS=8.498;HRun=0;HaplotypeScore=105.6733;InbreedingCoeff=-0.3648;MQ=63.10;MQ0=2;MQRankSum=-5.923;QD=4.62;ReadPosRankSum=-5.557;VQSLOD=-0.7039;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:21,2:23:99:178,0,359	0/1:14,1:14:6.15:6,0,647	0/1:34,0:26:1.84:2,0,1278	0/1:23,0:13:2.10:2,0,269	0/0:21,2:23:30.06:0,30,907	0/0:13,0:13:21:0,21,626	0/1:16,2:18:99:173,0,1057	0/1:12,0:12:17.47:17,0,559	0/1:7,1:8:57.03:57,0,318	0/1:14,5:19:99:367,0,624	0/0:14,0:14:30.07:0,30,644	0/0:18,1:19:1.25:0,1,400	0/0:11,1:12:25.28:0,25,717	0/1:18,1:19:9.40:9,0,1213	0/1:7,1:8:61.71:62,0,161	1/1:1,5:6:6.02:103,6,0	0/1:16,1:17:38.29:38,0,796	0/1:11,1:12:99:112,0,223	0/1:20,0:20:76.87:77,0,1010	0/0:15,1:16:27.46:0,27,525	0/0:35,1:34:49.53:0,50,1366	0/1:13,2:13:48.21:48,0,683	0/1:13,2:13:99:127,0,703	0/0:20,0:20:29.87:0,30,806	0/1:13,0:12:61.99:64,0,62	0/1:11,0:12:50.39:50,0,505	0/0:5,0:5:15.05:0,15,428	0/0:1,0:1:3.01:0,3,89
chr10	15904583	.	GGC	G	204.86	PASS	AB=0.880;AC=12;AF=0.214;AN=56;BaseQRankSum=6.824;DP=430;FS=2.599;HRun=0;HaplotypeScore=76.8696;InbreedingCoeff=-0.1481;MQ=64.42;MQ0=2;MQRankSum=-3.256;QD=1.21;ReadPosRankSum=-3.807;VQSLOD=0.6451;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:14,9:23:20.81:21,0,259	0/0:11,2:12:23.66:0,24,393	0/0:33,0:25:53.63:0,54,823	0/1:20,0:12:26.24:26,0,150	0/0:19,2:22:26.66:0,27,513	0/0:10,2:12:21.07:0,21,372	0/1:15,3:18:38.32:38,0,551	0/0:12,0:12:6.39:0,6,341	0/0:8,0:8:0.64:0,1,107	0/1:14,4:18:99:107,0,348	0/0:14,0:14:29.80:0,30,447	0/0:16,0:16:7.87:0,8,271	0/0:11,0:11:27.07:0,27,457	0/0:17,0:17:17.56:0,18,653	0/1:8,0:8:28.84:29,0,108	1/1:5,1:6:5.93:40,6,0	0/1:14,3:17:11.50:11,0,512	0/1:10,2:12:17.96:18,0,126	0/1:19,2:20:31.38:31,0,502	0/0:12,3:15:20.12:0,20,434	0/0:30,4:32:45.15:0,45,806	0/0:12,3:13:9.94:0,10,364	0/1:13,1:12:7.74:8,0,361	0/0:19,1:20:26.66:0,27,481	0/1:10,1:11:20.73:21,0,25	0/0:10,2:11:3.48:0,3,247	0/0:5,0:5:15.05:0,15,280	0/0:1,0:1:3.01:0,3,58
chr10	15905063	.	A	AGGG	1331.63	PASS	AB=0.962;AC=32;AF=0.593;AN=54;BaseQRankSum=0.778;DP=199;FS=1.909;HRun=3;HaplotypeScore=74.2817;InbreedingCoeff=-0.1541;MQ=66.70;MQ0=10;MQRankSum=-2.995;QD=7.93;ReadPosRankSum=0.033;VQSLOD=-0.3380;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:4,0:4:3.11:3,0,39	1/1:5,2:6:6.02:131,6,0	0/0:7,0:3:0.46:0,0,38	0/1:17,0:9:4.01:4,0,81	0/0:10,1:10:5.77:0,6,69	1/1:6,3:9:1.13:231,1,0	1/1:6,3:7:0.73:45,1,0	0/1:6,0:5:33.93:45,0,34	1/1:6,0:4:2.77:18,3,0	0/1:6,2:8:50.30:162,0,50	1/1:9,5:14:4.67:86,5,0	0/0:1,0:1:0:0,0,0	0/0:2,0:2:1.45:0,1,3	1/1:1,0:1:2.37:8,2,0	1/1:6,0:7:3.48:42,3,0	1/1:5,0:3:1.08:3,1,0	0/1:5,0:3:26.86:58,0,27	1/1:3,0:3:1.95:8,2,0	0/1:6,0:4:7.89:8,0,68	0/1:4,0:4:5.16:5,0,54	./.	0/1:11,0:9:3.25:3,0,78	0/1:8,0:6:34.73:36,0,35	0/0:6,0:5:6:0,6,70	0/1:7,0:5:33.04:33,0,36	0/1:11,1:12:66.33:167,0,66	1/1:2,2:4:5.97:87,6,0	0/1:11,3:13:29.69:283,0,30
chr10	15905628	.	A	AGTTCGCTCTTT	55342.42	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-6.605;DP=736;FS=5.938;HRun=0;HaplotypeScore=210.7747;InbreedingCoeff=0.9999;MQ=77.21;MQ0=0;MQRankSum=-20.170;QD=125.78;ReadPosRankSum=0.760;VQSLOD=4.7886;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,13:31:60.21:3039,60,0	1/1:5,11:17:45.15:2299,45,0	0/0:14,0:15:36.07:0,36,1035	0/0:36,0:35:74.99:0,75,2280	1/1:12,15:29:75.26:3117,75,0	1/1:7,11:20:48.16:2552,48,0	1/1:24,12:40:93.32:4680,93,0	0/0:27,0:27:75.25:0,75,2358	1/1:8,14:23:60.21:3173,60,0	1/1:15,12:28:75.21:3830,75,0	1/1:8,10:19:48.16:2345,48,0	1/1:6,14:25:50.97:2697,51,0	0/0:21,0:21:51.16:0,51,1704	0/0:28,0:28:75.26:0,75,2568	1/1:14,22:36:99:5311,102,0	1/1:10,16:28:75.26:4136,75,0	1/1:11,9:23:42.14:2280,42,0	1/1:7,9:18:39.13:2134,39,0	0/0:24,0:24:63.17:0,63,1970	0/0:19,0:19:51.12:0,51,1411	0/0:48,0:48:99:0,141,4675	0/0:32,0:32:96.33:0,96,3323	0/0:16,0:16:45.13:0,45,1291	0/0:30,0:30:75.26:0,75,2485	1/1:14,15:30:81.28:4229,81,0	1/1:15,21:36:99:5315,102,0	1/1:11,10:22:51.17:2745,51,0	1/1:9,5:14:30.10:1460,30,0
chr10	15907014	.	C	CGA	8851.09	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-17.166;DP=683;FS=10.902;HRun=0;HaplotypeScore=75.5485;InbreedingCoeff=0.9998;MQ=82.10;MQ0=1;MQRankSum=-2.097;QD=48.63;ReadPosRankSum=1.853;VQSLOD=5.3923;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,30:30:75.26:1374,75,0	0/0:11,0:11:33.09:0,33,453	0/0:14,0:14:36.06:0,36,467	0/0:22,0:22:50.66:0,51,681	0/0:19,0:19:57.19:0,57,810	0/0:21,0:21:60.20:0,60,857	0/0:25,0:25:72.24:0,72,1031	0/0:34,0:34:93.31:0,93,1331	1/1:0,23:23:69.24:1264,69,0	0/0:27,0:27:66.19:0,66,916	0/0:14,0:14:33.11:0,33,471	1/1:0,28:28:75.26:1374,75,0	0/0:29,0:29:87.29:0,87,1245	0/0:16,0:16:39.13:0,39,558	1/1:1,22:23:60.21:1100,60,0	1/1:0,24:24:66.23:1210,66,0	0/0:42,0:42:99:0,111,1539	1/1:2,25:28:69.24:1265,69,0	0/0:17,0:17:45.12:0,45,620	0/0:21,0:21:60.13:0,60,799	0/0:51,0:51:99:0,141,1959	0/0:15,0:15:33.11:0,33,472	0/0:17,0:17:45.15:0,45,640	0/0:46,0:46:99:0,138,1977	1/1:2,23:25:69.24:1265,69,0	0/0:21,0:21:63.19:0,63,868	0/0:16,0:16:42.12:0,42,574	0/0:23,0:23:69.21:0,69,968
chr10	15907472	.	A	AT	4906.65	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=-11.485;DP=653;FS=6.714;HRun=9;HaplotypeScore=63.0251;InbreedingCoeff=0.9377;MQ=73.28;MQ0=0;MQRankSum=-2.132;QD=22.61;ReadPosRankSum=-0.220;VQSLOD=5.5148;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,43:47:99:1331,122,0	0/0:5,0:5:12:0,12,104	0/1:24,0:19:1.42:1,0,248	0/0:16,0:16:25.37:0,25,201	0/0:33,0:33:83.95:0,84,729	0/0:28,0:28:74.97:0,75,651	0/0:25,0:24:65.97:0,66,568	0/0:32,0:32:64.76:0,65,564	1/1:3,16:19:39.05:431,39,0	0/0:23,0:23:59.97:0,60,518	0/0:21,0:21:56.97:0,57,491	1/1:6,26:32:69.19:762,69,0	0/0:20,0:20:50.99:0,51,443	0/0:23,0:23:53.96:0,54,465	1/1:2,17:19:42.11:465,42,0	1/1:4,22:26:57.15:631,57,0	0/0:33,0:33:83.98:0,84,729	1/1:6,22:28:69.18:755,69,0	0/0:16,0:16:30.14:0,30,277	0/0:23,0:23:53.93:0,54,462	0/0:13,0:13:38.99:0,39,338	0/0:22,0:22:59.98:0,60,521	0/0:18,0:18:44.98:0,45,391	0/0:19,0:19:50.97:0,51,439	1/1:6,16:22:48.13:531,48,0	0/0:31,0:31:80.98:0,81,703	0/0:27,0:27:68.95:0,69,594	0/0:7,0:7:15:0,15,130
chr10	15908037	.	G	GT	10338.70	PASS	AB=1.000;AC=39;AF=0.696;AN=56;BaseQRankSum=-9.626;DP=689;FS=0.000;HRun=10;HaplotypeScore=76.6711;InbreedingCoeff=0.8624;MQ=74.29;MQ0=0;MQRankSum=-0.944;QD=21.32;ReadPosRankSum=-3.065;VQSLOD=4.4122;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,2:36:16.04:0,16,519	1/1:0,6:6:18.05:192,18,0	0/0:16,0:15:6.24:0,6,101	0/1:13,0:13:32.92:33,0,69	1/1:2,20:22:45.11:480,45,0	1/1:4,16:22:50.93:515,51,0	1/1:4,28:32:59.53:827,60,0	1/1:13,19:33:48.81:591,49,0	0/0:26,1:27:58.22:0,58,596	1/1:2,24:27:62.92:628,63,0	1/1:1,15:16:42.10:444,42,0	0/0:30,0:31:82.92:0,83,668	1/1:7,14:21:5.43:263,5,0	1/1:2,19:23:46.03:447,46,0	0/0:27,0:27:65.91:0,66,542	0/0:26,1:27:36.90:0,37,507	1/1:8,35:42:90.23:960,90,0	0/0:15,0:15:38.94:0,39,320	1/1:4,19:24:38.46:591,38,0	1/1:2,20:22:35.41:548,35,0	1/1:17,27:46:83.20:1002,83,0	1/1:8,15:24:38.64:418,39,0	1/1:1,22:23:45.64:469,46,0	1/1:5,26:32:69.17:730,69,0	0/0:23,1:25:7.10:0,7,407	1/1:2,19:21:54.09:551,54,0	1/1:6,15:22:38.84:396,39,0	1/1:1,11:12:24.06:256,24,0
chr10	15908269	.	GA	G	4592.60	PASS	AB=0.729;AC=20;AF=0.357;AN=56;BaseQRankSum=1.689;DP=598;FS=10.444;HRun=10;HaplotypeScore=106.8497;InbreedingCoeff=0.8463;MQ=68.73;MQ0=0;MQRankSum=-3.722;QD=18.15;ReadPosRankSum=0.552;VQSLOD=4.3440;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:24:63.06:0,63,347	1/1:4,8:12:29.97:254,30,0	0/1:28,3:26:60.26:60,0,240	0/0:15,1:15:0.03:0,0,185	1/1:11,15:26:53.96:468,54,0	1/1:10,20:30:79.77:674,80,0	1/1:2,18:20:47.92:409,48,0	0/0:26,0:25:48.13:0,48,531	0/0:4,0:16:40.05:0,40,217	1/1:6,20:23:23.76:433,24,0	1/1:7,16:23:47.71:402,48,0	0/0:7,0:26:66.09:0,66,388	0/0:14,0:14:36.09:0,36,390	0/0:16,0:17:38.85:0,39,388	0/0:10,0:26:60.56:0,61,367	0/0:2,0:14:36.89:0,37,184	1/1:5,13:18:47.98:416,48,0	0/0:8,0:17:37.07:0,37,195	0/0:20,0:20:39.02:0,39,408	0/0:20,0:22:56.95:0,57,599	0/0:16,0:16:39.11:0,39,431	0/0:17,0:17:36.08:0,36,383	0/0:19,1:20:28.06:0,28,523	0/0:22,2:24:34.10:0,34,595	0/0:13,0:27:60.25:0,60,327	1/1:11,20:31:80.27:667,80,0	1/1:3,21:24:68.90:582,69,0	0/1:2,10:12:0.18:227,0,0
chr10	15908302	.	T	TA	5805.16	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=-3.102;DP=564;FS=15.675;HRun=10;HaplotypeScore=108.7940;InbreedingCoeff=0.9171;MQ=62.64;MQ0=0;MQRankSum=-0.572;QD=22.59;ReadPosRankSum=-0.110;VQSLOD=3.7906;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:19:33.30:0,33,101	1/1:1,10:11:27.07:288,27,0	0/1:14,0:11:27.70:28,0,79	0/0:14,0:13:16.67:0,17,126	1/1:6,23:29:41.46:632,41,0	1/1:6,24:30:51.13:628,51,0	1/1:6,6:12:21.05:224,21,0	0/0:21,1:22:15.91:0,16,333	0/0:1,0:10:18.33:0,18,53	1/1:3,26:26:50.33:694,50,0	1/1:2,20:22:35.42:556,35,0	0/0:6,0:21:33.98:0,34,111	0/0:16,0:16:35.90:0,36,292	0/0:18,0:18:50.94:0,51,418	0/0:4,0:18:31.98:0,32,109	0/0:2,0:16:27.36:0,27,79	1/1:4,17:22:32.33:532,32,0	0/0:4,0:13:18.78:0,19,56	0/0:18,0:18:41.93:0,42,344	0/0:25,0:25:59.57:0,60,473	0/0:12,0:12:26.93:0,27,218	0/0:14,0:15:35.80:0,36,273	0/0:20,0:20:41.91:0,42,345	0/0:18,0:18:39.10:0,39,340	0/0:6,0:29:50.81:0,51,167	1/1:11,33:44:77.54:985,78,0	1/1:3,28:31:81.20:863,81,0	1/1:2,11:13:36.08:376,36,0
chr10	15908319	.	TA	T	2571.50	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=6.576;DP=577;FS=0.837;HRun=9;HaplotypeScore=114.7550;InbreedingCoeff=0.9804;MQ=65.79;MQ0=0;MQRankSum=-9.392;QD=21.61;ReadPosRankSum=1.979;VQSLOD=3.1861;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,17:19:45:411,45,0	0/0:13,0:13:33.10:0,33,378	0/0:14,0:11:24.04:0,24,254	0/0:16,0:14:6.04:0,6,235	0/0:35,1:36:50.63:0,51,796	0/0:27,0:27:54.13:0,54,609	0/0:11,0:11:27.08:0,27,312	0/0:31,0:31:72.21:0,72,824	1/1:1,10:11:30.01:274,30,0	0/0:30,0:27:75.22:0,75,858	0/0:20,0:20:48.13:0,48,545	1/1:0,17:17:51.03:466,51,0	0/0:19,0:19:57.16:0,57,648	0/0:21,0:21:60.12:0,60,652	1/1:3,15:18:45.02:411,45,0	1/1:4,10:14:30.01:274,30,0	0/0:21,0:21:57.15:0,57,645	1/1:1,13:13:39.02:357,39,0	0/0:18,0:18:51.13:0,51,573	0/0:22,0:22:60.13:0,60,654	0/0:15,0:15:39.12:0,39,450	0/0:17,0:17:39.12:0,39,449	0/0:22,0:22:60.17:0,60,681	0/0:16,0:16:38.79:0,39,427	1/1:2,23:25:63.02:576,63,0	0/0:40,0:40:99:0,112,1253	0/0:36,0:36:84.20:0,84,944	0/0:13,0:13:39.10:0,39,439
chr10	15908462	.	CCT	C	1693.56	PASS	AB=0.979;AC=16;AF=0.286;AN=56;BaseQRankSum=13.592;DP=549;FS=19.654;HRun=0;HaplotypeScore=91.6957;InbreedingCoeff=0.6669;MQ=77.95;MQ0=5;MQRankSum=-0.463;QD=8.06;ReadPosRankSum=6.871;VQSLOD=1.5053;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:65.73:0,66,910	1/1:10,0:10:20.96:74,21,0	0/0:24,0:23:7.54:0,8,541	0/0:18,0:18:45.09:0,45,653	1/1:22,1:23:62.24:383,62,0	1/1:21,1:22:56.34:265,56,0	0/1:24,0:24:65.76:137,0,66	0/0:22,0:22:60.02:0,60,711	0/0:14,0:14:37.68:0,38,589	0/1:25,1:26:99:152,0,105	0/1:19,1:20:1.02:201,0,1	0/0:21,0:21:57.13:0,57,791	0/0:17,0:17:39.22:0,39,195	0/0:14,0:14:42.10:0,42,631	0/0:17,0:17:48.15:0,48,735	0/0:24,0:23:72.08:0,72,1131	1/1:23,0:21:7.73:171,8,0	0/0:19,0:19:53.97:0,54,841	0/0:15,0:15:44.50:0,44,614	0/0:14,0:14:35.33:0,35,489	0/0:25,0:25:71.99:0,72,1040	0/0:17,0:17:51:0,51,687	0/0:18,0:18:51.13:0,51,741	0/0:15,0:15:45.05:0,45,654	0/0:21,0:21:60.62:0,61,856	0/1:20,0:20:61.97:105,0,62	1/1:24,0:22:22.03:230,22,0	1/1:18,0:17:42.22:168,42,0
chr10	15908464	.	TCC	T	5816.46	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=5.521;DP=557;FS=18.158;HRun=10;HaplotypeScore=79.4948;InbreedingCoeff=0.9987;MQ=77.97;MQ0=5;MQRankSum=-0.328;QD=27.44;ReadPosRankSum=5.642;VQSLOD=3.1735;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:57.10:0,57,814	1/1:1,9:10:27.07:301,27,0	0/0:24,0:24:19.08:0,19,421	0/0:19,0:19:39.11:0,39,547	1/1:1,22:23:69.19:765,69,0	1/1:1,21:22:66.18:735,66,0	1/1:5,20:25:54.14:602,54,0	0/0:21,0:21:33.04:0,33,445	0/0:14,0:14:39.11:0,39,576	1/1:6,21:27:60.10:656,60,0	1/1:2,17:19:48.13:534,48,0	0/0:21,0:21:46.03:0,46,680	0/0:0,0:18:37.31:0,37,129	0/0:13,0:13:36.11:0,36,542	0/0:17,0:17:48.15:0,48,736	0/0:24,0:24:74.68:0,75,1079	1/1:1,23:22:54.14:602,54,0	0/0:18,0:19:56.60:0,57,789	0/0:15,0:15:39.10:0,39,551	0/0:14,0:15:35.60:0,36,497	0/0:25,0:26:69.14:0,69,974	0/0:16,0:17:41.48:0,41,580	0/0:18,0:18:42.14:0,42,647	0/0:14,0:15:39.10:0,39,573	0/0:22,0:22:65.67:0,66,927	1/1:4,15:19:42.10:462,42,0	1/1:3,21:23:50:594,50,0	1/1:2,16:17:51.14:565,51,0
chr10	15909335	.	AT	A	5393.60	PASS	AB=0.850;AC=35;AF=0.625;AN=56;BaseQRankSum=11.030;DP=456;FS=1.976;HRun=11;HaplotypeScore=58.7323;InbreedingCoeff=0.8306;MQ=71.17;MQ0=1;MQRankSum=0.042;QD=17.86;ReadPosRankSum=3.551;VQSLOD=5.9071;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,19:23:52.97:425,53,0	1/1:1,3:4:5.99:49,6,0	0/0:15,0:6:5.96:0,6,47	0/0:15,0:12:1.91:0,2,37	1/1:0,19:21:54.81:413,55,0	1/1:3,18:22:52.97:425,53,0	1/1:1,10:12:28.99:228,29,0	0/0:32,0:32:38.49:0,38,598	1/1:3,2:6:8.02:55,8,0	1/1:2,11:13:32.76:260,33,0	1/1:3,26:31:72.80:562,73,0	1/1:1,9:10:23.97:197,24,0	0/0:13,0:13:36.09:0,36,384	0/0:11,0:11:30.07:0,30,319	1/1:5,11:16:38.91:317,39,0	1/1:5,11:17:37.80:298,38,0	1/1:4,23:27:53.93:443,54,0	1/1:4,18:22:53.93:443,54,0	0/1:14,3:17:30.40:30,0,281	0/0:16,1:18:26.37:0,26,465	0/0:14,0:14:36.09:0,36,384	0/0:10,1:11:5.43:0,5,263	0/0:15,0:15:36.09:0,36,382	0/0:10,0:10:27.07:0,27,287	1/1:0,16:16:41.93:341,42,0	1/1:3,21:24:33.92:483,34,0	1/1:2,14:16:38.94:320,39,0	1/1:0,4:5:14.02:104,14,0
chr10	15910938	.	CGTGTGTGTGTGTGTGTGTGTGTGT	C	6100.63	PASS	AB=0.758;AC=19;AF=0.339;AN=56;BaseQRankSum=8.014;DP=696;FS=16.842;HRun=0;HaplotypeScore=369.4074;InbreedingCoeff=0.7658;MQ=52.90;MQ0=14;MQRankSum=-6.080;QD=28.38;ReadPosRankSum=0.757;VQSLOD=1.6098;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:36:27.56:0,28,850	1/1:3,4:7:6.49:377,6,0	0/0:24,0:10:3.01:0,3,177	0/0:38,0:17:9.03:0,9,481	1/1:12,11:22:8.63:296,9,0	1/1:7,7:14:9.03:450,9,0	1/1:29,11:38:6.02:242,6,0	0/0:16,0:16:15.05:0,15,792	0/0:17,0:28:39.10:0,39,962	1/1:14,14:28:26.40:1106,26,0	1/1:10,7:17:15.05:628,15,0	0/0:14,0:20:25.77:0,26,662	0/0:28,0:27:52.95:0,53,3733	0/0:31,0:31:47.52:0,48,3523	0/0:13,0:26:23.02:0,23,587	0/0:15,0:20:27.06:0,27,821	0/1:17,8:25:33.92:180,0,34	0/0:17,0:18:24.08:0,24,820	0/0:18,0:18:15.05:0,15,960	0/0:7,0:7:15.05:0,15,1057	0/0:64,0:63:83.04:0,83,5396	0/0:27,0:27:32.93:0,33,2111	0/0:15,0:15:33.11:0,33,2613	0/0:44,0:44:87.30:0,87,7374	0/0:7,0:15:2.26:0,2,206	1/1:19,10:30:30.09:1402,30,0	1/1:12,11:24:20.22:1231,20,0	1/1:6,1:7:2.66:187,3,0
chr10	15911114	.	T	TC	9970.82	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-11.115;DP=550;FS=4.235;HRun=5;HaplotypeScore=55.4466;InbreedingCoeff=0.9834;MQ=67.89;MQ0=0;MQRankSum=2.060;QD=30.40;ReadPosRankSum=1.948;VQSLOD=5.5295;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,25:28:51.17:669,51,0	1/1:0,4:4:9.03:116,9,0	0/0:22,0:20:36.74:0,37,535	0/0:15,0:15:16.74:0,17,241	1/1:1,7:8:21.04:258,21,0	1/1:1,16:17:42.14:553,42,0	1/1:11,29:39:75.24:987,75,0	0/0:12,0:12:30.07:0,30,322	1/1:2,17:20:48.16:629,48,0	1/1:2,19:21:57.19:749,57,0	1/1:1,6:8:18.06:235,18,0	1/1:3,24:27:72.23:944,72,0	0/0:23,0:23:63.16:0,63,677	0/0:27,0:27:69.17:0,69,741	1/1:2,18:20:48.16:631,48,0	1/1:2,17:19:45.15:592,45,0	1/1:0,22:22:60.20:789,60,0	1/1:6,22:28:66.21:866,66,0	0/0:11,0:11:24.06:0,24,258	0/0:5,0:5:15.04:0,15,161	0/0:53,0:53:99:0,135,1450	0/0:8,0:8:24.06:0,24,258	0/0:8,0:8:21.05:0,21,226	0/0:38,0:38:99:0,99,1051	1/1:0,9:9:24.08:316,24,0	1/1:1,19:19:57.16:731,57,0	1/1:2,21:23:50.97:670,51,0	1/1:7,7:14:18.06:237,18,0
chr10	15912462	.	AAC	A	10147.42	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=19.831;DP=731;FS=3.401;HRun=0;HaplotypeScore=127.2984;InbreedingCoeff=0.9993;MQ=81.20;MQ0=0;MQRankSum=-5.130;QD=45.50;ReadPosRankSum=2.811;VQSLOD=6.0866;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,138,2787	1/1:0,7:7:21.07:342,21,0	0/0:37,0:36:99:0,99,1849	0/0:28,0:25:65.98:0,66,1224	1/1:0,22:22:60.20:974,60,0	1/1:0,21:21:57.19:926,57,0	1/1:0,25:25:72.25:1170,72,0	0/0:29,0:29:87.30:0,87,1763	0/0:19,0:19:54.19:0,54,1097	1/1:0,36:36:99:1677,108,0	1/1:0,19:19:48.16:780,48,0	0/0:35,0:35:99:0,105,2134	0/0:24,0:24:72.25:0,72,1446	0/0:22,0:22:66.23:0,66,1324	0/0:21,0:21:63.22:0,63,1280	0/0:29,0:29:87.28:0,87,1732	1/1:0,31:31:81.28:1317,81,0	0/0:31,0:31:90.31:0,90,1810	0/0:27,0:27:81.28:0,81,1645	0/0:30,0:30:90.31:0,90,1827	0/0:26,0:26:78.27:0,78,1530	0/0:25,0:25:75.24:0,75,1487	0/0:19,0:19:57.20:0,57,1139	0/0:36,0:36:99:0,108,2124	0/0:23,0:23:69.24:0,69,1384	1/1:0,23:23:69.24:1118,69,0	1/1:2,27:28:84.29:1355,84,0	1/1:0,10:10:30.10:488,30,0
chr10	15913152	.	GGAAT	G	12293.30	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=-10.492;DP=717;FS=2.752;HRun=0;HaplotypeScore=141.1125;InbreedingCoeff=0.9446;MQ=73.53;MQ0=7;MQRankSum=-2.279;QD=27.50;ReadPosRankSum=4.423;VQSLOD=4.8868;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,23:37:51.17:803,51,0	0/0:4,0:11:21.06:0,21,342	0/0:22,0:16:0.47:0,0,1	0/0:17,0:17:3.21:0,3,236	0/0:10,0:23:42.14:0,42,688	0/0:17,0:32:42.13:0,42,710	0/0:15,0:35:63.19:0,63,1067	1/1:20,16:36:45.09:606,45,0	1/1:6,27:33:72.20:1153,72,0	0/0:12,0:29:57.17:0,57,977	0/0:9,0:17:29.95:0,30,400	1/1:9,13:22:30.10:480,30,0	1/1:5,10:15:18.06:288,18,0	1/1:11,24:36:69.23:1085,69,0	1/1:9,21:30:57.19:913,57,0	1/1:9,22:31:66.23:1057,66,0	0/0:12,0:27:36.12:0,36,669	1/1:10,16:26:39.13:604,39,0	1/1:12,15:26:45.13:696,45,0	1/1:10,15:26:39.13:624,39,0	1/1:10,21:30:54.18:865,54,0	1/1:5,19:24:54.18:865,54,0	1/1:4,14:18:28.66:478,29,0	1/1:6,19:25:51.17:817,51,0	1/1:6,22:28:60.20:961,60,0	0/0:5,0:28:72.24:0,72,1224	0/0:5,0:19:36.12:0,36,650	0/0:8,0:8:12:0,12,117
chr10	15913941	.	GAC	G	1986.40	PASS	AB=0.785;AC=18;AF=0.321;AN=56;BaseQRankSum=-4.002;DP=711;FS=4.749;HRun=0;HaplotypeScore=114.7496;InbreedingCoeff=0.6152;MQ=74.13;MQ0=16;MQRankSum=1.698;QD=7.98;ReadPosRankSum=2.044;VQSLOD=3.3312;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:35:37.26:0,37,369	0/0:6,0:8:8.99:0,9,76	0/0:56,1:36:6.01:0,6,65	0/0:54,0:29:6.02:0,6,87	0/0:9,0:28:26.14:0,26,191	0/0:12,0:22:15:0,15,130	0/0:25,0:25:14.97:0,15,150	0/1:16,9:26:30.72:188,0,31	1/1:7,9:17:23.73:230,24,0	0/0:15,0:26:40.31:0,40,256	0/0:8,0:19:11.81:0,12,71	0/0:10,0:24:30:0,30,283	1/1:8,14:22:23.96:269,24,0	1/1:9,6:16:11.76:115,12,0	0/0:23,0:34:35.99:0,36,330	0/0:7,0:22:30.02:0,30,301	0/0:19,0:29:3:0,3,26	0/1:20,1:32:22.20:22,0,344	1/1:11,1:11:14.87:148,15,0	1/1:6,10:18:31.80:285,32,0	0/1:15,14:28:78.38:82,0,78	1/1:7,5:18:29.41:258,29,0	0/1:8,1:11:4.03:96,0,4	1/1:18,24:42:25.41:492,25,0	0/0:4,0:17:29.98:0,30,257	0/0:22,0:22:35.73:0,36,275	0/0:10,0:27:24.86:0,25,207	0/0:3,0:10:11.92:0,12,93
chr10	15915237	.	A	AGTGT	6220.67	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=11.511;DP=777;FS=0.396;HRun=0;HaplotypeScore=149.7836;InbreedingCoeff=0.8960;MQ=64.92;MQ0=8;MQRankSum=-2.327;QD=23.39;ReadPosRankSum=-0.034;VQSLOD=4.7200;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:38:49.24:0,49,1290	1/1:4,6:11:12.04:285,12,0	0/1:51,0:26:12.09:12,0,30	0/0:35,0:19:8.24:0,8,97	1/1:8,22:31:29.07:674,29,0	1/1:13,11:26:19.37:497,19,0	1/1:17,6:27:20.79:286,21,0	0/0:38,0:39:47.46:0,47,845	0/0:15,0:15:30.09:0,30,465	1/1:4,13:19:8.87:823,9,0	1/1:4,10:15:18.48:387,18,0	0/0:24,0:25:54.13:0,54,806	0/0:23,0:23:26.30:0,26,711	0/0:24,0:25:44.58:0,45,860	0/0:17,0:17:33.10:0,33,515	0/0:24,0:24:51.13:0,51,761	1/1:7,12:25:11.53:756,12,0	0/0:22,0:22:54.10:0,54,824	0/0:15,0:15:24.06:0,24,343	0/0:29,0:30:56.48:0,56,1017	0/0:73,0:76:99:0,168,2532	0/0:27,0:28:51.15:0,51,787	0/0:21,0:22:51.17:0,51,807	0/0:46,0:50:95.13:0,95,1730	0/0:26,0:26:60.19:0,60,952	1/1:14,15:32:63.17:1296,63,0	1/1:10,10:21:27.09:626,27,0	1/1:0,8:8:24.08:577,24,0
chr10	15920867	.	T	TACACACACACACACAC	6466.62	PASS	AB=0.730;AC=50;AF=0.962;AN=52;BaseQRankSum=-2.733;DP=604;FS=0.000;HRun=0;HaplotypeScore=229.4574;InbreedingCoeff=-0.0357;MQ=57.32;MQ0=9;MQRankSum=0.454;QD=11.71;ReadPosRankSum=-0.195;VQSLOD=2.9695;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:35,0:33:17.54:441,18,0	1/1:7,0:7:6.02:313,6,0	./.	./.	1/1:21,0:21:6:89,6,0	1/1:25,0:25:6.02:127,6,0	1/1:38,0:38:18.88:253,19,0	1/1:23,0:22:20.14:302,20,0	1/1:14,0:14:3.01:107,3,0	1/1:17,0:17:23.45:1005,23,0	1/1:16,0:16:0.47:1,0,0	1/1:22,0:22:6.02:131,6,0	1/1:23,0:22:3.01:96,3,0	1/1:24,0:24:6.20:175,6,0	1/1:18,0:26:6.02:121,6,0	0/1:14,0:20:21.97:119,0,22	1/1:25,0:24:14.98:344,15,0	0/1:13,0:21:16.35:228,0,16	1/1:14,0:14:12.04:285,12,0	1/1:16,0:15:6.02:149,6,0	1/1:40,0:39:6.74:171,7,0	1/1:23,0:23:5.78:160,6,0	1/1:15,0:14:9.01:199,9,0	1/1:23,0:22:5.97:135,6,0	1/1:18,0:17:6.02:158,6,0	1/1:21,0:17:19.10:709,19,0	1/1:12,2:17:15.52:622,16,0	1/1:6,0:6:3:25,3,0
chr10	15920875	.	C	CAC	1218.63	PASS	AB=0.911;AC=48;AF=0.960;AN=50;DP=607;FS=0.000;HRun=0;HaplotypeScore=104.8552;InbreedingCoeff=0.1733;MQ=50.25;MQ0=12;QD=2.27;VQSLOD=1.5755;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:32,0:30:16.99:124,17,0	1/1:10,0:10:2.98:21,3,0	./.	./.	1/1:19,0:19:6:65,6,0	1/1:25,0:25:6.02:77,6,0	1/1:36,0:36:18.94:187,19,0	1/1:18,0:17:4.98:12,5,0	./.	1/1:19,0:18:6.64:17,7,0	0/1:16,0:16:0:0,0,0	1/1:23,0:23:6:68,6,0	0/1:18,4:22:0:0,0,0	1/1:26,0:26:5.92:49,6,0	1/1:25,0:25:3:26,3,0	1/1:22,0:21:6:52,6,0	1/1:26,0:25:9.45:85,9,0	1/1:23,0:22:6.88:54,7,0	1/1:14,0:14:9.03:108,9,0	1/1:18,0:17:5.97:47,6,0	1/1:41,0:40:5.90:47,6,0	1/1:24,0:24:5.92:50,6,0	1/1:16,0:15:8.19:53,8,0	1/1:24,0:23:5.55:47,6,0	1/1:18,0:17:6.01:67,6,0	1/1:18,0:14:1.72:4,2,0	1/1:16,0:15:3.89:28,4,0	1/1:6,0:6:1.25:3,1,0
chr10	15922018	.	TG	T	3689.13	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=11.173;DP=593;FS=0.779;HRun=10;HaplotypeScore=74.7789;InbreedingCoeff=0.9428;MQ=67.85;MQ0=0;MQRankSum=0.860;QD=18.35;ReadPosRankSum=3.435;VQSLOD=4.4188;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:66.11:0,66,701	1/1:2,11:13:29.99:260,30,0	0/0:9,0:9:5.11:0,5,105	0/0:13,0:10:7.85:0,8,66	1/1:8,18:26:50.97:442,51,0	1/1:7,16:23:44.98:391,45,0	1/1:3,21:24:50.99:443,51,0	0/0:13,0:14:24.06:0,24,265	0/0:20,1:21:22.05:0,22,460	1/1:8,16:24:38.98:338,39,0	1/1:1,12:13:32.99:286,33,0	0/0:17,2:19:10.01:0,10,315	0/0:28,1:30:45.93:0,46,696	0/0:18,0:18:38.79:0,39,430	0/0:30,1:31:46.09:0,46,709	0/0:30,0:30:63.16:0,63,689	1/1:6,26:32:80.97:703,81,0	0/0:25,0:25:63.16:0,63,688	0/0:17,0:17:27.01:0,27,267	0/0:21,0:21:24.06:0,24,265	0/0:32,0:32:69.15:0,69,743	0/0:26,1:27:45.11:0,45,490	0/0:14,1:15:7.01:0,7,293	0/0:17,2:19:18.88:0,19,405	0/0:19,1:20:13.03:0,13,363	1/1:5,9:14:26.99:234,27,0	1/1:4,20:24:26.80:462,27,0	1/1:3,5:8:15:130,15,0
chr10	15925268	.	A	AAAATAAAT	3749.67	PASS	AB=0.900;AC=35;AF=0.972;AN=36;BaseQRankSum=-0.969;DP=284;FS=0.000;HRun=0;HaplotypeScore=95.6372;InbreedingCoeff=-0.1188;MQ=76.70;MQ0=2;MQRankSum=-0.969;QD=17.36;ReadPosRankSum=0.247;VQSLOD=2.4406;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,0:12:11.99:109,12,0	1/1:1,2:3:6.02:244,6,0	./.	./.	1/1:2,1:3:6.02:186,6,0	1/1:17,2:19:18.06:518,18,0	1/1:5,0:6:2.99:24,3,0	1/1:38,0:37:21.03:430,21,0	./.	1/1:7,0:7:3.01:48,3,0	./.	./.	1/1:3,0:6:11.99:131,12,0	1/1:4,0:4:3.01:38,3,0	./.	1/1:6,0:6:3.01:57,3,0	1/1:22,3:25:26.86:692,27,0	0/1:16,0:18:46.17:117,0,46	1/1:17,0:19:15:139,15,0	1/1:7,0:7:2.99:24,3,0	./.	./.	1/1:5,0:5:3.01:47,3,0	./.	1/1:12,0:13:9:93,9,0	1/1:7,1:8:6.02:170,6,0	./.	1/1:14,3:17:21.07:681,21,0
chr10	15925314	.	C	CA	2357.66	PASS	AB=0.722;AC=42;AF=0.778;AN=54;BaseQRankSum=-0.174;DP=251;FS=1.133;HRun=13;HaplotypeScore=48.8894;InbreedingCoeff=0.1688;MQ=52.57;MQ0=8;MQRankSum=0.907;QD=10.72;ReadPosRankSum=0.843;VQSLOD=2.8916;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,0:9:5.24:32,5,0	0/1:1,1:2:14.54:22,0,15	0/0:11,0:5:3.84:0,4,10	0/0:13,0:3:2.94:0,3,20	0/1:2,4:6:8.57:72,0,9	1/1:1,1:8:11.64:76,12,0	1/1:1,0:4:8.67:53,9,0	0/1:10,11:21:28.74:173,0,29	1/1:0,4:4:6.01:56,6,0	0/0:4,1:5:2.29:0,2,19	1/1:0,8:8:21.02:195,21,0	1/1:2,0:3:2.84:14,3,0	1/1:4,4:8:9.01:84,9,0	0/1:2,0:2:0:0,0,0	1/1:2,1:10:18.39:93,18,0	1/1:1,1:8:8.68:57,9,0	0/1:14,13:28:11.02:308,0,11	1/1:7,0:22:16.69:160,17,0	1/1:6,13:19:37.40:336,37,0	1/1:2,8:10:18.02:167,18,0	./.	1/1:0,2:2:3:28,3,0	1/1:2,1:3:3:28,3,0	1/1:0,3:4:11.91:100,12,0	1/1:6,0:13:25.73:143,26,0	0/1:4,2:6:11.65:36,0,12	1/1:2,6:8:10.22:78,10,0	1/1:3,6:9:21:186,21,0
chr10	15926542	.	GTCTCTCTCTCTCTCTCTC	G	579.59	PASS	AB=1.000;AC=13;AF=0.250;AN=52;BaseQRankSum=-1.773;DP=441;FS=1.599;HRun=0;HaplotypeScore=202.1684;InbreedingCoeff=0.5289;MQ=53.04;MQ0=24;MQRankSum=-0.546;QD=6.30;ReadPosRankSum=0.647;VQSLOD=2.8838;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:17:15.05:0,15,541	0/0:14,0:12:5.97:0,6,178	./.	./.	0/0:23,0:22:3.46:0,3,24	0/0:18,0:17:11.87:0,12,466	0/0:19,0:19:5.76:0,6,84	0/0:20,0:20:7.23:0,7,26	1/1:11,2:13:3.01:144,3,0	0/0:15,0:15:30.10:0,30,1420	1/1:11,0:10:0.31:1,0,0	0/0:12,0:11:9.97:0,10,272	1/1:9,1:10:6.02:287,6,0	0/1:11,0:11:0:0,0,0	0/0:15,0:15:15.05:0,15,420	0/0:13,0:13:7.26:0,7,105	0/0:12,0:12:9.03:0,9,316	0/0:15,0:15:9.03:0,9,350	0/0:9,0:8:3.59:0,4,10	1/1:10,3:13:3.06:141,3,0	1/1:19,0:18:5.98:47,6,0	0/0:8,0:7:2.37:0,2,8	0/0:5,2:7:0.47:0,0,1	1/1:15,0:15:3.01:87,3,0	0/0:13,0:12:6.02:0,6,101	0/0:20,0:20:39.13:0,39,1642	0/0:21,0:20:24.01:0,24,1025	0/0:5,0:5:6.02:0,6,381
chr10	15926558	.	C	CTG	1034.89	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=7.925;DP=417;FS=7.688;HRun=0;HaplotypeScore=103.6324;InbreedingCoeff=0.6493;MQ=44.99;MQ0=36;MQRankSum=-4.926;QD=6.85;ReadPosRankSum=3.581;VQSLOD=2.5748;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:21:38.93:0,39,317	0/1:11,0:9:14.47:60,0,14	0/0:18,0:6:14.90:0,15,120	0/0:44,0:9:15.01:0,15,148	1/1:21,3:22:3.47:27,3,0	1/1:14,3:16:19.96:161,20,0	0/1:17,0:15:9.77:53,0,10	0/0:20,0:18:47.82:0,48,392	0/0:11,0:11:17.22:0,17,134	0/1:14,0:14:37.12:117,0,37	1/1:8,2:9:9.21:75,9,0	0/0:16,0:13:29.68:0,30,244	0/0:7,0:7:20.78:0,21,155	0/0:9,0:9:26.85:0,27,209	0/0:18,0:18:46.45:0,46,393	0/0:10,0:10:17.30:0,17,148	1/1:13,1:13:7.70:137,8,0	0/0:15,0:14:38.37:0,38,270	0/0:9,0:7:14.15:0,14,98	0/0:10,0:10:23.85:0,24,181	0/0:16,0:15:20.98:0,21,175	0/0:8,0:6:17.97:0,18,147	0/0:5,0:5:8.92:0,9,67	0/0:13,0:11:20.92:0,21,163	0/0:14,0:13:32.83:0,33,274	1/1:16,2:18:15.24:291,15,0	1/1:20,4:23:12.32:250,12,0	1/1:1,1:2:4.56:46,5,0
chr10	15926562	.	C	CTG	47.39	PASS	AB=0.922;AC=8;AF=0.143;AN=56;BaseQRankSum=6.449;DP=420;FS=14.217;HRun=0;HaplotypeScore=119.7241;InbreedingCoeff=0.1224;MQ=42.68;MQ0=37;MQRankSum=-6.422;QD=0.47;ReadPosRankSum=3.236;VQSLOD=1.4625;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:22:41.93:0,42,344	0/1:11,0:9:23.06:23,0,55	0/0:15,0:5:15.02:0,15,156	0/0:38,0:6:15:0,15,131	0/0:21,3:22:0.60:0,1,5	0/1:12,3:14:5.92:23,0,6	0/0:15,0:13:13.32:0,13,64	0/0:20,0:18:49.45:0,49,369	0/0:11,0:11:17.20:0,17,134	0/1:15,0:15:16.18:16,0,104	0/0:9,2:10:6.90:0,7,37	0/0:14,0:11:24.13:0,24,190	0/0:6,0:6:17.85:0,18,133	0/0:10,0:10:23.85:0,24,184	0/0:16,0:16:41.94:0,42,346	0/0:10,0:10:17.30:0,17,148	0/1:12,1:12:14.13:14,0,32	0/0:16,0:15:38.50:0,38,277	0/0:11,0:9:14.11:0,14,91	0/0:14,0:14:26.45:0,26,197	0/0:19,0:18:26.51:0,27,224	0/0:11,0:9:17.32:0,17,147	0/0:7,0:7:11.91:0,12,90	0/0:13,0:11:14.93:0,15,117	0/0:14,0:13:32.83:0,33,274	0/1:18,2:20:3.05:3,0,194	0/1:21,4:24:29.80:30,0,137	1/1:1,1:2:6.01:67,6,0
chr10	15926566	.	C	CTG	451.46	PASS	AB=0.908;AC=9;AF=0.161;AN=56;BaseQRankSum=7.548;DP=415;FS=15.766;HRun=0;HaplotypeScore=115.9666;InbreedingCoeff=0.1676;MQ=40.41;MQ0=38;MQRankSum=-7.252;QD=4.43;ReadPosRankSum=1.933;VQSLOD=1.9749;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:21:41.93:0,42,343	1/1:8,0:7:0.53:60,1,0	0/0:12,0:2:6.01:0,6,70	0/0:35,0:4:8.99:0,9,75	0/0:20,3:21:0.83:0,1,8	0/1:12,3:14:8.49:48,0,8	0/0:15,0:13:13.82:0,14,71	0/0:19,0:17:44.70:0,45,341	0/0:12,0:12:20.17:0,20,158	0/1:17,0:17:64.17:64,0,74	0/0:9,2:10:4.47:0,4,20	0/0:14,0:11:24.17:0,24,198	0/0:6,0:6:17.85:0,18,134	0/0:8,0:8:14.64:0,15,105	0/0:17,0:17:44.92:0,45,368	0/0:11,0:11:20.17:0,20,163	0/1:13,1:13:21.53:59,0,22	0/0:15,0:14:38.51:0,39,275	0/0:12,0:10:23.79:0,24,170	0/0:15,0:15:22.79:0,23,178	0/0:22,0:21:29.81:0,30,248	0/0:11,0:9:17.56:0,18,145	0/0:7,0:7:11.77:0,12,91	0/0:15,0:13:14.93:0,15,116	0/0:10,0:9:17.84:0,18,150	0/1:17,2:19:99:141,0,108	0/1:23,4:26:61.34:138,0,61	1/1:1,1:2:6.02:75,6,0
chr10	15926981	.	GTGTTGT	G	2725.27	PASS	AC=16;AF=0.308;AN=52;BaseQRankSum=8.930;DP=696;FS=1.110;HRun=0;HaplotypeScore=133.8052;InbreedingCoeff=0.9331;MQ=69.78;MQ0=9;MQRankSum=-2.548;QD=13.90;ReadPosRankSum=-0.614;VQSLOD=2.7742;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:60.12:0,60,1523	1/1:0,10:10:6.02:126,6,0	0/0:41,0:27:45:0,45,677	0/0:43,0:26:36.05:0,36,575	./.	1/1:7,19:26:18.06:377,18,0	1/1:9,22:31:9.03:188,9,0	0/0:35,0:35:54.49:0,54,757	0/0:25,0:25:60.20:0,60,1531	1/1:15,12:27:30.09:475,30,0	1/1:15,2:18:27.09:440,27,0	0/0:27,0:27:69.17:0,69,1380	0/0:26,0:26:54.19:0,54,1493	0/0:23,0:24:63.15:0,63,1446	0/0:30,0:30:72.24:0,72,1643	0/0:25,0:25:69.24:0,69,1656	1/1:8,18:26:3.01:63,3,0	0/0:20,0:20:48.10:0,48,1100	0/0:25,0:25:44.52:0,45,850	0/0:18,0:19:45.07:0,45,1012	0/0:35,0:34:82.07:0,82,1681	0/0:22,0:22:12.31:0,12,1216	0/0:18,0:18:33.10:0,33,754	0/0:30,0:31:75.19:0,75,1979	0/0:12,0:11:26.83:0,27,566	1/1:11,18:29:51.05:743,51,0	1/1:7,22:29:23.98:503,24,0	./.
chr10	15927587	.	C	CT	6743.65	PASS	AB=0.579;AC=19;AF=0.339;AN=56;BaseQRankSum=3.289;DP=659;FS=0.000;HRun=8;HaplotypeScore=89.4198;InbreedingCoeff=0.9459;MQ=72.42;MQ0=0;MQRankSum=-7.385;QD=29.84;ReadPosRankSum=0.673;VQSLOD=4.0898;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:63.01:0,63,577	0/1:3,8:11:0.37:250,0,0	0/0:16,0:16:38.01:0,38,341	0/0:9,0:8:9.19:0,9,83	1/1:7,30:37:96.28:1106,96,0	1/1:1,24:25:72.21:831,72,0	1/1:1,20:21:60.18:692,60,0	0/0:34,0:34:89.99:0,90,817	0/0:19,0:19:51.02:0,51,467	1/1:6,23:29:75.18:844,75,0	1/1:3,17:20:45.13:519,45,0	0/0:25,0:25:72.02:0,72,653	0/0:26,0:26:75.04:0,75,686	0/0:29,0:29:75.03:0,75,686	0/0:23,0:23:66.03:0,66,604	0/0:26,0:26:72:0,72,650	1/1:7,15:22:63.17:717,63,0	0/0:18,0:18:42.02:0,42,384	0/0:25,0:25:60.01:0,60,546	0/0:39,0:39:99:0,102,923	0/0:23,0:23:63:0,63,570	0/0:23,0:23:57.02:0,57,522	0/0:27,0:27:75.04:0,75,686	0/0:17,0:17:48.03:0,48,439	0/0:27,0:27:81.04:0,81,737	1/1:3,24:27:75.19:851,75,0	1/1:4,24:28:69.20:795,69,0	1/1:2,4:6:12.04:138,12,0
chr10	15927628	.	T	TTTAA	15934.95	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=2.760;DP=679;FS=5.063;HRun=0;HaplotypeScore=117.2172;InbreedingCoeff=0.9963;MQ=69.46;MQ0=0;MQRankSum=-10.036;QD=64.00;ReadPosRankSum=-1.505;VQSLOD=6.2070;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:63.22:0,63,1196	1/1:2,9:12:33.09:798,33,0	0/0:18,0:18:39.13:0,39,711	0/0:6,0:6:17.89:0,18,237	1/1:9,21:32:90.14:1946,90,0	1/1:3,24:27:78.25:1990,78,0	1/1:8,10:18:51.15:1135,51,0	0/0:45,0:45:99:0,126,2297	0/0:19,0:19:54.18:0,54,1006	1/1:6,22:29:84.28:2191,84,0	1/1:3,23:26:72.25:1717,72,0	0/0:23,0:23:69.20:0,69,1197	0/0:26,0:26:72.25:0,72,1367	0/0:24,0:24:63.19:0,63,1163	0/0:28,0:28:75.24:0,75,1363	0/0:24,0:24:66.23:0,66,1253	1/1:8,11:22:42.14:1106,42,0	0/0:22,0:22:60.19:0,60,1072	0/0:23,0:23:60.19:0,60,1092	0/0:40,0:40:99:0,108,1974	0/0:19,0:19:57.19:0,57,1035	0/0:27,0:27:75.25:0,75,1394	0/0:21,0:21:57.11:0,57,983	0/0:15,0:15:45.15:0,45,854	0/0:28,0:28:81.26:0,81,1479	1/1:8,29:39:99:2444,99,0	1/1:5,25:33:90.31:2218,90,0	1/1:0,5:11:15.05:390,15,0
chr10	15927630	.	T	TA	2847.75	PASS	AB=0.975;AC=18;AF=0.321;AN=56;BaseQRankSum=19.403;DP=670;FS=7.617;HRun=1;HaplotypeScore=120.1209;InbreedingCoeff=0.8000;MQ=68.23;MQ0=0;MQRankSum=-9.872;QD=11.35;ReadPosRankSum=1.651;VQSLOD=1.7440;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:63.20:0,63,817	1/1:12,0:12:31.25:177,31,0	0/0:15,0:16:42.13:0,42,532	0/0:6,0:6:18.03:0,18,209	1/1:30,2:32:9.84:416,10,0	1/1:25,2:27:74.35:428,74,0	0/1:18,1:19:9.34:277,0,9	0/0:44,0:44:99:0,129,1629	0/0:19,0:19:57.17:0,57,725	1/1:28,0:28:77.10:434,77,0	1/1:27,0:27:4.48:328,4,0	0/0:24,0:24:72.18:0,72,877	0/0:26,0:26:75.23:0,75,959	0/0:23,0:23:66.19:0,66,828	0/0:26,0:26:75.22:0,75,947	0/0:23,0:23:69.22:0,69,883	1/1:22,1:23:35.44:226,35,0	0/0:22,0:22:66.16:0,66,808	0/0:22,0:22:63.18:0,63,789	0/0:38,0:38:99:0,112,1400	0/0:19,0:19:57.19:0,57,738	0/0:25,0:25:75.24:0,75,961	0/0:20,0:20:57.11:0,57,705	0/0:15,0:15:45.15:0,45,584	0/0:28,0:28:81.25:0,81,1037	0/1:38,0:38:25.58:380,0,26	1/1:34,0:34:11.17:327,11,0	1/1:11,0:11:10.71:55,11,0
chr10	15928098	.	TTAATGGTGA	T	13516.29	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=17.964;DP=654;FS=2.424;HRun=0;HaplotypeScore=187.5707;InbreedingCoeff=0.9865;MQ=76.49;MQ0=0;MQRankSum=-16.469;QD=67.58;ReadPosRankSum=2.556;VQSLOD=4.9816;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,111,5080	1/1:3,4:7:12.04:360,12,0	0/0:20,0:20:54.19:0,54,2406	0/0:13,0:13:33.11:0,33,1550	1/1:2,31:33:69.06:1859,69,0	1/1:1,10:11:30.10:901,30,0	1/1:2,17:19:42.14:1261,42,0	0/0:35,0:35:99:0,99,4270	0/0:16,0:16:48.16:0,48,2306	1/1:3,27:30:81.27:2351,81,0	1/1:2,18:20:51.09:1391,51,0	0/0:27,0:27:81.28:0,81,3771	0/0:19,0:19:54.19:0,54,2399	0/0:29,0:29:81.28:0,81,3678	0/0:24,0:24:66.23:0,66,3106	0/0:21,0:21:63.22:0,63,3010	1/1:5,13:18:30.10:901,30,0	0/0:21,0:21:60.21:0,60,2883	0/0:18,0:18:48.14:0,48,1997	0/0:34,0:34:93.32:0,93,4391	0/0:32,0:32:93.32:0,93,4264	0/0:30,0:30:87.30:0,87,4162	0/0:31,0:31:90.31:0,90,4220	0/0:13,0:13:39.13:0,39,1770	0/0:33,0:33:96.32:0,96,4496	1/1:3,25:28:75.25:2150,75,0	1/1:3,25:27:69.24:2072,69,0	1/1:3,3:6:9.03:270,9,0
chr10	15929386	.	GTGTCC	G	7292.38	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=15.659;DP=671;FS=12.986;HRun=0;HaplotypeScore=152.5288;InbreedingCoeff=0.9843;MQ=81.50;MQ0=0;MQRankSum=-15.846;QD=45.29;ReadPosRankSum=1.402;VQSLOD=4.5631;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,135,3777	1/1:2,5:7:15.05:297,15,0	0/0:25,0:24:60.20:0,60,1530	0/0:39,0:34:81.23:0,81,1893	1/1:3,17:20:39.13:805,39,0	1/1:2,15:17:42.14:866,42,0	1/1:6,14:20:36.12:743,36,0	0/0:26,0:26:75.24:0,75,2070	0/0:25,0:25:69.24:0,69,2095	1/1:9,14:23:48.16:982,48,0	1/1:1,4:5:12.04:245,12,0	0/0:24,0:24:69.22:0,69,1948	0/0:27,0:27:75.26:0,75,2173	0/0:32,0:32:90.31:0,90,2657	0/0:31,0:31:87.30:0,87,2632	0/0:28,0:28:84.29:0,84,2541	1/1:8,17:25:51.18:1056,51,0	0/0:26,0:26:75.26:0,75,2306	0/0:19,0:19:54.19:0,54,1661	0/0:18,0:18:45.13:0,45,1248	0/0:51,0:50:99:0,144,4160	0/0:25,0:25:69.24:0,69,2074	0/0:19,0:19:51.18:0,51,1491	0/0:21,0:21:63.22:0,63,1915	0/0:24,0:23:69.22:0,69,1998	1/1:3,21:24:63.22:1304,63,0	1/1:2,13:15:39.13:808,39,0	1/1:1,4:5:9.03:186,9,0
chr10	15932108	.	GC	G	8404.43	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=16.685;DP=753;FS=1.243;HRun=5;HaplotypeScore=73.0558;InbreedingCoeff=0.9992;MQ=84.83;MQ0=0;MQRankSum=-4.066;QD=30.67;ReadPosRankSum=3.119;VQSLOD=5.5657;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:78.25:0,78,1049	1/1:0,8:8:21.06:238,21,0	0/0:23,0:23:66.13:0,66,829	0/0:26,0:26:39.40:0,39,734	1/1:2,25:26:66.19:748,66,0	1/1:1,30:31:78.22:885,78,0	1/1:1,27:28:78.22:885,78,0	0/0:37,0:37:99:0,108,1463	0/0:26,0:26:75.23:0,75,1008	1/1:1,34:35:99:1157,102,0	1/1:1,20:21:48.14:544,48,0	0/0:22,0:22:63.20:0,63,844	0/0:31,0:31:93.31:0,93,1272	0/0:27,0:27:75.25:0,75,1026	0/0:34,0:34:99:0,99,1354	0/0:32,0:32:90.30:0,90,1230	1/1:3,24:27:69.20:783,69,0	0/0:24,0:24:66.22:0,66,903	0/0:21,0:21:51.12:0,51,644	0/0:23,0:23:66.22:0,66,902	0/0:48,0:48:99:0,138,1887	0/0:27,0:27:75.25:0,75,1020	0/0:10,0:10:27.07:0,27,350	0/0:20,0:20:60.20:0,60,821	0/0:20,0:20:57.19:0,57,778	1/1:2,31:33:90.26:1021,90,0	1/1:0,40:40:99:1327,117,0	1/1:0,24:24:72.21:817,72,0
chr10	15935299	.	A	ACCTATTAG	21333.33	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-6.066;DP=665;FS=7.336;HRun=0;HaplotypeScore=161.3499;InbreedingCoeff=0.9989;MQ=86.91;MQ0=0;MQRankSum=-18.749;QD=96.97;ReadPosRankSum=-2.056;VQSLOD=4.9831;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,144,3829	1/1:3,6:9:27.09:1084,27,0	0/0:28,0:28:78.25:0,78,1966	0/0:28,0:28:75.22:0,75,1951	1/1:11,12:25:42.14:1063,42,0	1/1:8,16:26:72.25:2502,72,0	1/1:8,8:16:42.14:1755,42,0	0/0:36,0:36:99:0,105,2620	0/0:24,0:24:72.22:0,72,1862	1/1:10,24:35:99:3990,99,0	1/1:5,20:26:63.22:2465,63,0	0/0:19,0:19:51.18:0,51,1420	0/0:25,0:25:72.24:0,72,1963	0/0:18,0:18:48.15:0,48,1294	0/0:28,0:28:84.27:0,84,2308	0/0:15,0:15:45.14:0,45,1208	1/1:3,7:12:21.07:869,21,0	0/0:17,0:17:48.12:0,48,1293	0/0:25,0:25:75.25:0,75,2008	0/0:18,0:18:51.18:0,51,1444	0/0:35,0:35:90.27:0,90,2439	0/0:22,0:22:66.21:0,66,1788	0/0:16,0:16:42.14:0,42,1169	0/0:17,0:17:51.18:0,51,1431	0/0:20,0:20:54.19:0,54,1528	1/1:7,20:30:87.28:3519,87,0	1/1:9,21:32:87.30:3520,87,0	1/1:6,3:9:24.08:567,24,0
chr10	15939267	.	T	TTA	10409.99	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-16.703;DP=566;FS=10.010;HRun=0;HaplotypeScore=56.6778;InbreedingCoeff=0.9957;MQ=73.31;MQ0=2;MQRankSum=-1.576;QD=45.46;ReadPosRankSum=2.939;VQSLOD=6.0919;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:60.20:0,60,853	1/1:0,8:8:18.06:330,18,0	0/0:11,0:11:30.08:0,30,400	0/0:8,0:8:21.06:0,21,279	1/1:1,33:34:90.31:1611,90,0	1/1:2,17:19:45.15:825,45,0	1/1:0,8:8:18.06:330,18,0	0/0:39,0:39:99:0,105,1483	0/0:14,0:13:39.13:0,39,559	1/1:1,28:29:44.59:1408,45,0	1/1:0,28:29:69.24:1265,69,0	0/0:15,0:15:45.14:0,45,622	0/0:13,0:13:36.11:0,36,495	0/0:12,0:12:36.12:0,36,515	0/0:23,0:23:63.18:0,63,861	0/0:25,0:25:72.24:0,72,1026	1/1:0,27:27:69.24:1264,69,0	0/0:18,0:18:48.16:0,48,684	0/0:18,0:18:42.13:0,42,582	0/0:29,0:29:78.25:0,78,1094	0/0:14,0:14:42.12:0,42,577	0/0:16,0:16:45.15:0,45,641	0/0:24,0:24:69.23:0,69,986	0/0:7,0:7:18.06:0,18,255	0/0:30,0:30:90.30:0,90,1288	1/1:1,17:17:45.14:794,45,0	1/1:3,26:29:69.24:1265,69,0	1/1:0,28:28:72.25:1318,72,0
chr10	15939743	.	AAAAAC	A	5815.33	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=13.130;DP=727;FS=1.947;HRun=0;HaplotypeScore=134.7577;InbreedingCoeff=0.8153;MQ=61.16;MQ0=4;MQRankSum=-0.582;QD=21.15;ReadPosRankSum=1.395;VQSLOD=4.8782;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:38.32:0,38,1325	0/0:16,0:16:24.08:0,24,666	0/0:31,0:22:1.25:0,1,3	0/0:38,0:26:3.48:0,3,67	0/0:25,0:25:39.13:0,39,1082	0/0:23,0:23:33.11:0,33,920	0/0:19,0:19:24.06:0,24,607	1/1:26,0:26:3.01:53,3,0	1/1:23,17:40:45.15:806,45,0	0/0:34,0:33:54.18:0,54,1435	0/0:25,0:25:39.13:0,39,1049	0/0:21,0:21:30.10:0,30,793	1/1:9,9:18:27.09:484,27,0	1/1:8,20:28:48.16:861,48,0	0/0:37,0:37:60.17:0,60,1512	0/0:31,0:31:45.15:0,45,1256	0/0:31,0:30:33.11:0,33,915	0/0:15,0:15:21.07:0,21,539	1/1:15,8:23:24.08:419,24,0	1/1:17,17:34:48.06:827,48,0	1/1:13,9:22:24.08:397,24,0	1/1:11,14:25:33.07:556,33,0	1/1:7,16:23:48.16:858,48,0	1/1:8,10:18:29.94:536,30,0	0/0:24,0:24:45.15:0,45,1196	0/0:27,1:28:0.35:0,0,1243	0/0:20,0:20:24.08:0,24,665	0/1:17,0:17:17.56:18,0,885
chr10	15941573	.	GT	G	1116.15	PASS	AB=1.000;AC=19;AF=0.365;AN=52;BaseQRankSum=4.065;DP=170;FS=9.515;HRun=1;HaplotypeScore=30.9894;InbreedingCoeff=0.6931;MQ=94.16;MQ0=4;MQRankSum=-0.264;QD=24.80;ReadPosRankSum=0.970;VQSLOD=2.4368;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:13.70:0,14,293	1/1:1,0:1:3.01:39,3,0	0/0:17,0:11:22.90:0,23,225	0/0:24,0:19:38.62:0,39,369	1/1:0,3:3:8.94:82,9,0	1/1:0,4:4:9.03:125,9,0	1/1:2,13:13:39.13:544,39,0	0/0:4,0:4:9.02:0,9,115	./.	1/1:0,1:1:3.01:42,3,0	1/1:0,3:3:6.02:78,6,0	0/0:4,0:4:12.04:0,12,175	0/0:3,0:3:6.02:0,6,88	0/0:1,0:1:3.01:0,3,44	0/0:1,0:1:3.01:0,3,44	0/1:3,0:3:0.61:1,0,79	1/1:0,10:10:15.05:209,15,0	0/0:5,0:5:15.01:0,15,179	0/0:9,0:9:27.03:0,27,303	0/0:4,0:4:6.01:0,6,69	0/0:22,0:21:60.13:0,60,783	0/0:3,0:3:9.03:0,9,132	0/0:2,0:2:6.01:0,6,69	0/0:7,0:7:12:0,12,135	0/0:6,0:6:15.04:0,15,202	1/1:0,3:3:8.99:88,9,0	1/1:0,2:2:6.02:84,6,0	./.
chr10	15942008	.	A	AT	6069.64	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-13.968;DP=526;FS=13.572;HRun=7;HaplotypeScore=48.9924;InbreedingCoeff=0.9990;MQ=70.52;MQ0=0;MQRankSum=-0.253;QD=30.81;ReadPosRankSum=3.081;VQSLOD=3.9652;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:60.09:0,60,579	1/1:1,7:8:24.07:286,24,0	0/0:13,0:13:28.79:0,29,267	0/0:13,0:13:33:0,33,306	1/1:3,21:25:37.09:707,37,0	1/1:1,21:22:57.17:689,57,0	1/1:0,9:9:24.07:290,24,0	0/0:30,0:30:84.11:0,84,802	0/0:23,0:23:66.11:0,66,637	1/1:3,18:21:57.17:685,57,0	1/1:1,16:17:45.14:544,45,0	0/0:16,0:16:48.08:0,48,464	0/0:21,0:21:57.09:0,57,550	0/0:18,0:18:54.09:0,54,522	0/0:24,0:24:72.12:0,72,695	0/0:26,0:26:72.10:0,72,690	1/1:2,17:19:51.16:616,51,0	0/0:13,0:13:36.06:0,36,348	0/0:16,0:16:36.05:0,36,345	0/0:18,0:18:51.08:0,51,492	0/0:16,0:16:42.06:0,42,405	0/0:15,0:15:42.07:0,42,405	0/0:19,0:19:39.04:0,39,371	0/0:9,0:9:27.04:0,27,261	0/0:16,0:16:45.07:0,45,435	1/1:7,24:31:81.20:948,81,0	1/1:5,24:29:66.20:797,66,0	1/1:2,14:16:42.13:507,42,0
chr10	15944098	.	TACAC	T	1977.54	PASS	AB=0.693;AC=26;AF=0.500;AN=52;BaseQRankSum=-1.549;DP=717;FS=3.808;HRun=0;HaplotypeScore=128.8563;InbreedingCoeff=0.3690;MQ=60.57;MQ0=15;MQRankSum=-0.890;QD=4.34;ReadPosRankSum=1.189;VQSLOD=2.5070;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:19,1:36:30.11:62,0,30	0/0:2,0:6:6.02:0,6,114	./.	./.	0/0:11,0:19:12.01:0,12,153	1/1:15,10:25:11.17:115,11,0	1/1:11,12:23:12:160,12,0	1/1:36,0:34:8.97:84,9,0	0/1:18,7:25:22.43:82,0,22	0/0:34,0:34:55.61:0,56,797	0/0:7,0:12:11.94:0,12,95	0/0:24,0:23:2.99:0,3,24	1/1:15,16:32:8.18:140,8,0	1/1:22,2:25:27.10:274,27,0	0/1:13,1:27:32.11:75,0,32	0/1:13,1:28:27.81:28,0,59	0/0:11,0:17:20.15:0,20,257	0/0:10,0:24:7.47:0,7,36	1/1:8,5:13:3.37:80,3,0	1/1:14,10:24:9.03:141,9,0	0/1:32,19:47:67.77:119,0,68	1/1:15,12:27:8.49:228,8,0	1/1:10,11:22:4.67:289,5,0	1/1:17,17:34:7.89:248,8,0	0/1:12,1:22:32.13:32,0,59	0/0:15,0:28:59.11:0,59,794	0/0:11,0:21:18.58:0,19,256	0/0:6,0:15:11.87:0,12,167
chr10	15945961	.	TTAC	T	2805.34	PASS	AB=0.676;AC=29;AF=0.537;AN=54;BaseQRankSum=-1.297;DP=578;FS=0.000;HRun=0;HaplotypeScore=109.5274;InbreedingCoeff=0.7660;MQ=58.46;MQ0=8;MQRankSum=0.673;QD=9.41;ReadPosRankSum=3.765;VQSLOD=3.0586;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,12:23:22.62:282,23,0	1/1:5,0:12:6.42:43,6,0	1/1:12,0:10:2.04:6,2,0	./.	1/1:10,0:18:11.76:77,12,0	0/0:20,0:20:8.15:0,8,130	0/0:12,0:12:6.38:0,6,43	0/0:40,0:38:13.64:0,14,142	0/0:10,0:25:24.06:0,24,288	1/1:6,0:22:13.64:93,14,0	1/1:7,0:19:17.62:116,18,0	1/1:11,13:24:30.10:398,30,0	0/0:10,0:25:21.04:0,21,243	0/0:15,0:31:12.01:0,12,139	1/1:11,12:23:27.09:358,27,0	1/1:8,14:22:33.11:438,33,0	1/1:6,0:15:7.19:45,7,0	1/1:4,13:17:13.11:378,13,0	0/0:8,0:13:7.66:0,8,98	0/0:14,0:20:11.99:0,12,122	0/0:10,0:18:8.98:0,9,86	0/0:9,0:21:26.75:0,27,266	0/0:11,0:17:3.48:0,3,40	0/0:7,0:17:3.01:0,3,39	1/1:12,19:32:36.08:459,36,0	0/1:12,0:23:0.82:120,0,1	1/1:15,0:27:23.81:168,24,0	1/1:4,0:8:2.98:21,3,0
chr10	15946431	.	T	TC	5206.99	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-12.530;DP=601;FS=2.520;HRun=7;HaplotypeScore=54.7068;InbreedingCoeff=0.9817;MQ=82.84;MQ0=0;MQRankSum=-1.465;QD=30.45;ReadPosRankSum=1.445;VQSLOD=5.3376;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:45.06:0,45,434	1/1:1,5:6:8.94:109,9,0	0/0:28,0:27:59.26:0,59,591	0/0:13,0:13:9.77:0,10,249	1/1:0,24:24:66.20:796,66,0	0/0:28,0:28:69.09:0,69,662	0/0:16,0:16:45.06:0,45,430	0/0:28,0:28:72.08:0,72,680	0/0:24,0:24:72.10:0,72,690	1/1:2,21:23:63.19:761,63,0	1/1:3,15:18:41.96:468,42,0	0/0:17,0:17:51.08:0,51,492	0/0:21,0:21:54.08:0,54,521	0/0:25,0:25:69.11:0,69,666	0/0:29,0:29:78.11:0,78,748	0/0:28,0:28:75.10:0,75,719	1/1:4,32:36:90.28:1087,90,0	0/0:21,0:21:60.07:0,60,572	0/0:13,0:13:36.04:0,36,340	0/0:13,0:13:39.06:0,39,376	0/0:29,0:29:68.46:0,68,645	0/0:19,0:19:48.07:0,48,463	0/0:21,0:21:57.09:0,57,550	0/0:21,0:21:57.07:0,57,544	0/0:15,0:15:45.06:0,45,429	1/1:1,18:19:54.17:652,54,0	1/1:1,27:27:75.23:900,75,0	1/1:3,14:17:36.11:434,36,0
chr10	15947982	.	ATCTCTCTCTCTC	A	609.11	PASS	AC=18;AF=0.409;AN=44;BaseQRankSum=4.729;DP=537;FS=1.330;HRun=0;HaplotypeScore=162.2333;InbreedingCoeff=0.6118;MQ=68.73;MQ0=12;MQRankSum=-2.181;QD=3.67;ReadPosRankSum=0.542;VQSLOD=2.8981;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:21.07:0,21,733	0/0:7,0:7:0:0,0,0	./.	./.	./.	1/1:20,4:24:5.81:68,6,0	1/1:17,3:19:3:37,3,0	0/0:25,0:25:1.25:0,1,3	1/1:15,0:15:0.47:1,0,0	0/0:33,0:33:24.22:0,24,508	./.	0/0:13,0:13:12.03:0,12,292	1/1:19,1:21:8.60:245,9,0	1/1:12,2:12:6.02:156,6,0	0/0:13,0:12:12.04:0,12,361	0/0:12,0:14:9.50:0,10,293	0/0:24,0:25:32.14:0,32,1421	0/0:6,0:6:9.03:0,9,344	./.	./.	1/1:23,0:23:3:35,3,0	1/1:8,0:8:2.94:31,3,0	1/1:13,0:13:3.01:41,3,0	1/1:25,1:25:6.49:139,6,0	0/0:15,0:15:6.02:0,6,139	0/0:26,0:25:30.10:0,30,1011	0/0:13,0:13:6.02:0,6,309	0/0:14,0:13:3.01:0,3,166
chr10	15948889	.	TTCTCTCTC	T	1942.71	PASS	AB=0.840;AC=18;AF=0.346;AN=52;BaseQRankSum=4.006;DP=617;FS=0.649;HRun=0;HaplotypeScore=154.4423;InbreedingCoeff=0.6007;MQ=55.03;MQ0=18;MQRankSum=-4.603;QD=8.37;ReadPosRankSum=-0.728;VQSLOD=2.6722;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:27:21.05:0,21,512	0/0:4,0:4:0:0,0,0	./.	0/1:24,0:12:0:0,0,0	0/0:45,0:43:35.85:0,36,767	0/1:18,0:30:22.48:143,0,22	0/1:12,0:16:28.70:65,0,29	0/1:27,6:31:31.71:104,0,32	1/1:9,12:21:9.03:205,9,0	0/0:31,0:29:25.09:0,25,408	0/0:25,0:25:12.04:0,12,191	0/0:14,0:19:15.05:0,15,408	1/1:12,6:18:9.03:187,9,0	1/1:10,7:17:12.51:278,13,0	0/0:9,0:18:12.04:0,12,377	0/0:15,0:24:33.07:0,33,744	0/0:22,0:21:20.97:0,21,411	0/0:11,0:11:12.04:0,12,317	1/1:16,4:19:4.46:167,4,0	1/1:13,10:25:30.05:582,30,0	1/1:11,0:9:5.93:44,6,0	1/1:7,9:16:15.05:343,15,0	0/0:12,0:19:17.91:0,18,152	0/0:26,0:29:11.11:0,11,197	0/0:20,0:20:26.80:0,27,473	0/0:28,0:27:23.77:0,24,485	0/0:27,0:28:48.02:0,48,918	./.
chr10	15949581	.	A	AAT	6009.63	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-9.173;DP=521;FS=20.679;HRun=0;HaplotypeScore=65.8795;InbreedingCoeff=0.9964;MQ=96.70;MQ0=0;MQRankSum=-3.503;QD=42.03;ReadPosRankSum=2.536;VQSLOD=4.4719;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:38.65:0,39,528	1/1:0,9:9:21.07:378,21,0	0/0:26,0:26:72.20:0,72,949	0/0:28,0:28:69.12:0,69,929	1/1:4,17:21:45.15:810,45,0	0/0:15,0:15:39.13:0,39,544	0/0:15,0:15:45.13:0,45,611	0/0:33,0:33:78.23:0,78,1056	0/0:18,0:18:51.16:0,51,697	1/1:4,16:22:48.15:836,48,0	1/1:2,19:23:42.14:756,42,0	0/0:16,0:16:45.15:0,45,629	0/0:17,0:17:51.15:0,51,696	0/0:28,0:28:78.24:0,78,1073	0/0:16,0:16:42.14:0,42,588	0/0:21,0:21:63.19:0,63,863	1/1:0,18:18:51.17:918,51,0	0/0:10,0:10:27.05:0,27,355	0/0:19,0:19:54.18:0,54,756	0/0:24,0:23:48.15:0,48,655	0/0:15,0:15:45.15:0,45,630	0/0:15,0:15:42.14:0,42,588	0/0:19,0:19:45.09:0,45,590	0/0:12,0:12:36.12:0,36,503	0/0:15,0:15:42.11:0,42,551	1/1:0,20:20:57.20:1015,57,0	1/1:3,21:25:56.98:1026,57,0	1/1:0,5:5:15.05:270,15,0
chr10	15949860	.	T	TC	6749.82	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-11.597;DP=623;FS=8.875;HRun=1;HaplotypeScore=61.6691;InbreedingCoeff=0.9976;MQ=72.49;MQ0=0;MQRankSum=-0.975;QD=37.09;ReadPosRankSum=1.093;VQSLOD=4.8119;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,150,1925	1/1:0,8:8:24.08:359,24,0	0/0:22,0:21:57.17:0,57,711	0/0:22,0:21:48.15:0,48,606	1/1:5,25:30:74.87:1032,75,0	0/0:20,0:20:57.16:0,57,712	0/0:18,0:18:51.17:0,51,660	0/0:24,0:24:63.20:0,63,817	0/0:18,0:17:48.16:0,48,623	1/1:2,23:25:66.20:967,66,0	1/1:1,21:22:51.15:737,51,0	0/0:19,0:19:54.18:0,54,700	0/0:19,0:19:57.18:0,57,736	0/0:24,0:24:72.23:0,72,932	0/0:21,0:21:60.14:0,60,745	0/0:33,0:33:99:0,99,1252	1/1:0,38:38:96.33:1437,96,0	0/0:8,0:8:18.06:0,18,233	0/0:17,0:17:48.16:0,48,623	0/0:24,0:24:66.21:0,66,853	0/0:24,0:24:69.21:0,69,881	0/0:13,0:13:39.13:0,39,503	0/0:15,0:15:36.12:0,36,467	0/0:22,0:22:63.16:0,63,795	0/0:27,0:27:78.23:0,78,994	1/1:3,24:27:72.21:1030,72,0	1/1:0,22:22:60.16:873,60,0	1/1:0,10:10:21.07:314,21,0
chr10	15950195	.	G	GT	5807.85	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=0.925;DP=645;FS=4.537;HRun=8;HaplotypeScore=81.2604;InbreedingCoeff=0.9771;MQ=66.74;MQ0=0;MQRankSum=-1.708;QD=28.06;ReadPosRankSum=1.380;VQSLOD=5.1839;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:28:74.04:0,74,654	1/1:3,14:17:33.57:382,34,0	0/0:14,0:14:23.68:0,24,261	0/0:10,0:10:21.01:0,21,191	1/1:9,31:40:68.78:1031,69,0	0/0:21,0:21:57.03:0,57,521	0/0:24,0:24:54:0,54,489	0/0:36,0:37:89.06:0,89,792	0/0:19,0:19:53.97:0,54,485	1/1:2,28:30:59.79:942,60,0	1/1:3,13:16:39.07:435,39,0	0/0:18,0:18:51.01:0,51,462	0/0:27,1:28:37.39:0,37,587	0/0:14,0:14:42.01:0,42,381	0/0:24,0:24:63.01:0,63,571	0/0:22,0:22:51:0,51,462	1/1:1,25:26:75.22:864,75,0	0/0:13,0:13:4.76:0,5,289	0/0:25,0:25:60.01:0,60,542	0/0:30,0:30:81.01:0,81,734	0/0:30,0:30:81.02:0,81,735	0/0:18,0:18:51.01:0,51,462	0/0:22,0:22:35.47:0,35,497	0/0:23,0:24:62.01:0,62,544	0/0:17,0:17:48.02:0,48,437	1/1:5,28:33:84.25:970,84,0	1/1:4,24:27:41.88:734,42,0	1/1:2,15:17:39.12:450,39,0
chr10	15950521	.	A	AT	4313.54	PASS	AB=0.853;AC=18;AF=0.321;AN=56;BaseQRankSum=4.824;DP=663;FS=4.060;HRun=11;HaplotypeScore=83.3265;InbreedingCoeff=0.7002;MQ=73.96;MQ0=0;MQRankSum=0.356;QD=16.85;ReadPosRankSum=-0.862;VQSLOD=5.3449;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,1:31:43.96:0,44,508	1/1:3,9:13:9.24:199,9,0	0/1:11,0:13:5.10:5,0,56	0/1:11,0:12:0.46:0,0,94	1/1:9,32:42:39.83:766,40,0	0/0:16,0:16:38.82:0,39,300	0/0:23,0:23:56.73:0,57,435	0/0:27,0:27:35.09:0,35,451	0/0:21,0:22:58.77:0,59,442	1/1:4,24:28:42.85:598,43,0	1/1:1,23:25:59.92:582,60,0	0/0:18,0:19:40.86:0,41,308	0/0:27,0:27:74.68:0,75,578	0/0:16,0:16:47.82:0,48,372	0/0:22,0:23:64.77:0,65,488	0/0:18,0:19:43.82:0,44,329	0/1:10,20:30:17.81:558,0,18	0/1:13,2:15:28.03:28,0,176	0/0:27,0:27:53.70:0,54,415	0/0:31,0:35:86.73:0,87,642	0/0:24,0:24:59.75:0,60,464	0/0:25,0:25:62.73:0,63,485	0/0:25,0:25:53.08:0,53,399	0/0:27,0:27:67.65:0,68,505	0/0:21,0:21:28.21:0,28,369	1/1:4,26:30:71.99:672,72,0	1/1:4,29:34:65.80:654,66,0	1/1:3,10:13:6.82:251,7,0
chr10	15950983	.	T	TA	5638.04	PASS	AB=0.594;AC=32;AF=0.571;AN=56;BaseQRankSum=-14.205;DP=514;FS=13.143;HRun=11;HaplotypeScore=68.7229;InbreedingCoeff=0.7095;MQ=74.32;MQ0=0;MQRankSum=-1.903;QD=17.14;ReadPosRankSum=0.634;VQSLOD=4.7905;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,16:20:41.91:394,42,0	0/0:0,0:10:18.32:0,18,53	0/0:8,1:8:14.91:0,15,115	0/0:13,0:14:9.43:0,9,68	0/0:5,0:23:24.37:0,24,70	0/1:6,13:19:6.90:200,0,7	1/1:1,13:14:12.79:301,13,0	1/1:6,19:25:46.86:442,47,0	1/1:3,16:20:42.08:426,42,0	0/0:6,0:25:37.46:0,37,110	0/0:2,0:13:12.95:0,13,42	0/1:2,8:10:9.65:186,0,10	1/1:2,13:15:6.82:251,7,0	1/1:5,11:16:6.38:223,6,0	1/1:1,19:21:44.25:481,44,0	1/1:4,15:19:15.84:342,16,0	0/0:5,0:25:40.74:0,41,118	1/1:3,18:21:48.09:486,48,0	1/1:10,8:18:9.83:268,10,0	0/1:9,22:31:1.44:331,0,1	1/1:4,12:16:4.28:216,4,0	0/1:7,9:16:2.20:162,0,2	1/1:3,16:19:33.07:335,33,0	1/1:0,7:9:20.16:227,20,0	1/1:3,16:20:18.84:368,19,0	0/0:5,0:28:49.46:0,49,164	0/0:7,0:24:47.03:0,47,153	0/0:1,0:14:26.48:0,26,77
chr10	15951084	.	AT	A	3738.91	PASS	AB=0.911;AC=26;AF=0.464;AN=56;BaseQRankSum=-3.654;DP=482;FS=0.378;HRun=10;HaplotypeScore=61.8935;InbreedingCoeff=0.8652;MQ=65.83;MQ0=1;MQRankSum=-0.571;QD=17.07;ReadPosRankSum=0.182;VQSLOD=3.9379;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:66.12:0,66,708	0/0:0,0:5:14.20:0,14,71	0/1:10,1:9:5:5,0,178	0/0:6,0:6:6.02:0,6,66	0/0:2,0:25:68.44:0,68,356	1/1:2,13:15:32.98:287,33,0	1/1:3,14:17:38.98:339,39,0	1/1:6,16:22:44.94:387,45,0	1/1:0,11:11:29.99:260,30,0	0/0:5,0:21:48.56:0,49,260	0/0:2,0:20:51.10:0,51,255	0/0:14,0:14:33.08:0,33,358	1/1:1,10:11:26.99:234,27,0	1/1:0,22:23:56.03:475,56,0	0/1:17,2:19:6.99:7,0,386	0/0:15,1:16:15.12:0,15,432	0/0:1,0:20:51.04:0,51,254	0/0:17,0:17:51.11:0,51,552	1/1:3,10:13:29.99:260,30,0	1/1:4,18:22:44.96:391,45,0	1/1:2,10:12:26.99:234,27,0	1/1:4,8:12:20.99:182,21,0	1/1:1,17:18:44.99:391,45,0	1/1:0,13:13:32.99:286,33,0	0/0:27,0:27:66.17:0,66,724	0/0:3,0:19:42.47:0,42,213	0/0:5,0:28:56.94:0,57,289	0/0:6,0:17:42.95:0,43,245
chr10	15952346	.	TG	T	4165.92	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=15.731;DP=649;FS=5.239;HRun=9;HaplotypeScore=88.1859;InbreedingCoeff=0.9977;MQ=74.97;MQ0=2;MQRankSum=-2.478;QD=20.83;ReadPosRankSum=3.458;VQSLOD=4.3651;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:37:98.95:0,99,1039	1/1:2,8:10:23.61:201,24,0	0/0:32,1:26:23.77:0,24,372	0/0:23,0:15:22.52:0,23,206	1/1:11,20:31:40.91:475,41,0	0/0:13,0:13:30.05:0,30,332	0/0:16,0:16:42.10:0,42,468	0/0:30,0:30:69.08:0,69,726	0/0:25,0:25:54.13:0,54,603	1/1:8,24:33:82.83:714,83,0	1/1:5,16:21:47.51:416,48,0	0/0:22,0:23:66.02:0,66,705	0/0:19,0:19:51.13:0,51,572	0/0:19,0:19:54.12:0,54,592	0/0:20,0:20:51.14:0,51,578	0/0:12,0:12:27.07:0,27,302	1/1:1,26:27:57.03:519,57,0	0/0:18,0:18:54.08:0,54,583	0/0:17,0:17:45.11:0,45,499	0/0:31,0:31:77.83:0,78,817	0/0:21,0:21:54.14:0,54,604	0/0:18,0:18:39.05:0,39,406	0/0:26,0:27:59.17:0,59,633	0/0:15,2:17:20.71:0,21,492	0/0:30,0:30:60.86:0,61,647	1/1:6,25:33:87.89:738,88,0	1/1:5,21:26:71.63:636,72,0	1/1:0,19:19:51.03:466,51,0
chr10	15953053	.	T	TGG	2855.01	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-4.847;DP=551;FS=0.475;HRun=8;HaplotypeScore=76.5388;InbreedingCoeff=0.9681;MQ=83.34;MQ0=0;MQRankSum=-0.624;QD=22.30;ReadPosRankSum=-0.171;VQSLOD=2.5236;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:96.16:0,96,1050	1/1:5,2:9:5.98:67,6,0	0/0:17,0:16:35.71:0,36,337	0/0:19,0:20:15.13:0,15,291	1/1:2,10:14:27.05:389,27,0	0/0:22,0:22:51.11:0,51,565	0/0:32,0:32:78.17:0,78,859	0/0:27,0:27:48.08:0,48,535	0/0:18,0:18:45.11:0,45,501	1/1:8,6:14:18.02:236,18,0	1/1:7,5:14:11.01:112,11,0	0/0:21,0:21:54.12:0,54,602	0/0:20,0:21:53.88:0,54,579	0/0:22,0:22:57.11:0,57,626	0/0:26,0:26:63.14:0,63,702	0/0:21,0:21:57.15:0,57,634	1/1:2,23:25:48.16:762,48,0	0/0:14,0:14:39.10:0,39,433	0/0:21,0:20:54.13:0,54,601	0/0:16,0:16:39.08:0,39,430	0/0:22,0:22:54.13:0,54,602	0/0:18,0:18:48.10:0,48,526	0/0:17,0:17:42.06:0,42,447	0/0:15,0:15:39.01:0,39,407	0/0:14,0:15:22.11:0,22,326	1/1:4,10:14:30.07:445,30,0	1/1:5,22:28:51.17:807,51,0	1/1:2,8:10:15.05:238,15,0
chr10	15954101	.	C	CCCCTCT	3015.26	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=5.998;DP=388;FS=2.995;HRun=0;HaplotypeScore=81.4335;InbreedingCoeff=0.8988;MQ=47.04;MQ0=19;MQRankSum=-5.596;QD=33.13;ReadPosRankSum=-1.359;VQSLOD=2.6982;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:51.31:0,51,933	1/1:3,2:5:3.01:97,3,0	0/0:31,0:7:14.99:0,15,173	0/0:41,0:9:14.20:0,14,225	1/1:9,5:13:9.03:227,9,0	0/0:9,0:9:21.07:0,21,449	0/0:17,0:17:42.10:0,42,699	0/0:20,0:20:30.07:0,30,508	0/0:12,0:12:24.06:0,24,469	1/1:12,3:14:33.09:647,33,0	1/1:9,1:10:17.94:312,18,0	0/0:10,0:10:27.05:0,27,447	0/0:9,0:7:21.06:0,21,408	0/0:6,0:6:15.05:0,15,318	0/0:11,0:10:27.06:0,27,452	0/0:13,0:12:33.09:0,33,624	1/1:15,4:18:33.01:635,33,0	0/0:10,0:8:15.01:0,15,255	0/0:13,0:13:21.07:0,21,406	0/0:10,0:10:21.03:0,21,384	0/0:15,0:16:30.98:0,31,552	0/0:13,0:13:27.06:0,27,476	0/0:13,0:12:29.54:0,30,566	0/0:12,0:10:5.49:0,5,127	0/0:9,0:9:15.05:0,15,314	1/1:8,6:14:33.06:798,33,0	1/1:6,2:8:12.04:308,12,0	1/1:2,4:5:6.02:184,6,0
chr10	15954174	.	TA	T	3128.59	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=14.511;DP=440;FS=7.518;HRun=7;HaplotypeScore=71.5896;InbreedingCoeff=0.9643;MQ=78.77;MQ0=0;MQRankSum=-1.505;QD=23.88;ReadPosRankSum=1.057;VQSLOD=3.9440;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:78.24:0,78,963	1/1:0,3:3:9.02:92,9,0	0/0:16,0:16:39.08:0,39,463	0/0:10,1:11:5.83:0,6,132	1/1:4,18:22:51.11:520,51,0	0/0:17,0:17:48.15:0,48,592	0/0:17,0:17:39.12:0,39,488	0/0:18,0:18:48.15:0,48,604	0/0:10,0:10:30.10:0,30,377	1/1:3,15:18:42.09:427,42,0	1/1:4,7:11:18.04:183,18,0	0/0:29,0:29:81.24:0,81,993	0/0:20,0:20:57.17:0,57,702	0/0:13,0:13:36.12:0,36,453	0/0:19,0:19:51.16:0,51,641	0/0:15,0:15:42.13:0,42,526	1/1:1,27:28:69.15:704,69,0	0/0:17,0:17:51.15:0,51,627	0/0:15,0:15:42.09:0,42,499	0/0:15,0:15:42.12:0,42,515	0/0:10,0:10:30.08:0,30,364	0/0:9,0:9:21.07:0,21,264	0/0:13,0:13:36.11:0,36,451	0/0:9,0:8:24.06:0,24,288	0/0:10,0:10:30.10:0,30,377	1/1:2,28:30:84.19:857,84,0	1/1:1,14:15:42.09:427,42,0	1/1:0,4:4:12.03:122,12,0
chr10	15954502	.	CCACA	C	468.20	PASS	AB=0.976;AC=9;AF=0.196;AN=46;BaseQRankSum=3.889;DP=475;FS=8.394;HRun=0;HaplotypeScore=98.2623;InbreedingCoeff=0.3708;MQ=67.30;MQ0=11;MQRankSum=-1.486;QD=5.26;ReadPosRankSum=2.648;VQSLOD=0.7417;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:26:17.06:0,17,257	./.	./.	./.	./.	0/0:10,0:11:12.03:0,12,175	0/0:29,0:29:6.39:0,6,314	0/0:12,0:10:5.93:0,6,40	0/0:14,0:14:15.05:0,15,272	1/1:13,1:12:4.26:49,4,0	./.	0/0:21,0:25:12.02:0,12,159	0/0:12,0:12:1.13:0,1,38	0/0:20,0:20:27.96:0,28,498	0/0:15,0:15:11.29:0,11,162	0/0:12,0:15:6.02:0,6,105	0/1:24,0:24:1.44:132,0,1	0/0:26,0:27:15.81:0,16,661	0/1:15,0:14:20.06:20,0,96	0/0:7,0:7:3:0,3,25	0/0:43,0:44:31.37:0,31,535	0/0:9,0:12:6.02:0,6,123	0/0:6,0:7:9.01:0,9,138	0/0:30,0:33:17.59:0,18,582	0/0:10,0:10:11.37:0,11,220	1/1:15,2:18:21.07:269,21,0	0/1:12,1:12:54.31:82,0,54	1/1:4,1:4:3.01:46,3,0
chr10	15954562	.	GCGCA	G	444.57	PASS	AB=0.857;AC=11;AF=0.196;AN=56;BaseQRankSum=9.393;DP=501;FS=9.795;HRun=0;HaplotypeScore=106.3545;InbreedingCoeff=0.7091;MQ=58.09;MQ0=10;MQRankSum=-4.086;QD=5.93;ReadPosRankSum=0.909;VQSLOD=1.6546;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:24:42.47:0,42,1459	0/0:3,0:3:4.07:0,4,12	0/0:15,0:11:33.10:0,33,645	0/0:13,0:9:27.09:0,27,597	0/0:14,1:14:1.46:0,1,5	0/0:13,0:13:36.05:0,36,819	0/0:39,0:38:96.13:0,96,2303	0/0:20,0:18:50.93:0,51,1175	0/0:14,0:14:33.11:0,33,824	1/1:7,0:6:13.35:70,13,0	1/1:6,0:6:0.47:1,0,0	0/0:19,0:18:3.32:0,3,881	0/0:14,0:13:22.32:0,22,751	0/0:24,0:23:63.05:0,63,1553	0/0:10,0:10:23.22:0,23,638	0/0:12,0:12:30.10:0,30,752	1/1:25,3:25:14.26:158,14,0	0/0:32,0:29:83.10:0,83,2029	0/0:15,0:15:42.11:0,42,980	0/0:3,0:3:6.02:0,6,144	0/0:64,0:63:99:0,140,3742	0/0:14,0:14:33.11:0,33,738	0/0:14,0:14:27.09:0,27,700	0/0:31,0:30:75.26:0,75,1965	0/0:16,0:15:29.88:0,30,639	1/1:14,2:16:21.11:224,21,0	0/1:10,2:12:25.31:91,0,25	1/1:6,0:4:10.72:56,11,0
chr10	15954566	.	A	ACACG	2391.49	PASS	AC=14;AF=0.259;AN=54;BaseQRankSum=-2.337;DP=507;FS=7.266;HRun=0;HaplotypeScore=104.4523;InbreedingCoeff=0.8273;MQ=60.11;MQ0=8;MQRankSum=-2.474;QD=24.65;ReadPosRankSum=1.413;VQSLOD=2.9667;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:26:60.21:0,60,1089	./.	0/0:15,0:11:33.10:0,33,579	0/0:14,0:10:30.10:0,30,531	1/1:4,9:14:3.01:81,3,0	0/0:13,0:13:33.10:0,33,577	0/0:38,0:38:99:0,102,1714	0/0:21,0:20:54.06:0,54,858	0/0:13,0:13:33.11:0,33,607	1/1:3,5:10:5.90:444,6,0	1/1:1,5:6:3.01:81,3,0	0/0:21,0:20:45.04:0,45,739	0/0:14,0:13:19.38:0,19,554	0/0:24,0:23:63.18:0,63,1085	0/0:11,0:11:29.69:0,30,512	0/0:14,0:14:32.84:0,33,583	1/1:6,20:27:35.81:874,36,0	0/0:29,0:28:84.19:0,84,1440	0/0:15,0:15:42.11:0,42,731	0/0:3,0:3:5.80:0,6,114	0/0:61,0:60:99:0,153,2682	0/0:14,0:14:30.56:0,31,529	0/0:13,0:13:27.08:0,27,479	0/0:31,0:31:78.27:0,78,1444	0/0:16,0:15:12.06:0,12,457	1/1:6,11:17:18.75:623,19,0	1/1:4,7:11:0.63:203,1,0	1/1:7,0:5:12:253,12,0
chr10	15956132	.	A	AAGAC	3048.68	PASS	AB=0.651;AC=9;AF=0.161;AN=56;BaseQRankSum=-9.638;DP=831;FS=1.186;HRun=0;HaplotypeScore=158.1402;InbreedingCoeff=0.5537;MQ=59.73;MQ0=14;MQRankSum=1.381;QD=15.63;ReadPosRankSum=6.135;VQSLOD=3.2563;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:26,28:54:99:547,0,109	0/0:10,0:10:27.05:0,27,290	0/0:37,0:15:4.63:0,5,95	0/0:34,0:23:5.19:0,5,68	0/0:29,0:29:63.15:0,63,738	0/0:24,0:24:45.14:0,45,676	0/0:34,0:35:63.19:0,63,924	0/0:42,0:42:40.36:0,40,551	0/0:29,0:29:51.17:0,51,775	0/0:41,0:41:65.16:0,65,702	0/0:19,0:19:39.09:0,39,461	1/1:8,14:21:20.92:499,21,0	0/0:23,0:23:45.12:0,45,633	0/0:27,0:27:63.21:0,63,969	1/1:9,17:26:27.09:642,27,0	0/1:14,20:35:20.26:544,0,20	0/0:28,0:28:60.15:0,60,751	0/1:17,16:33:99:546,0,104	0/0:20,0:16:21.06:0,21,309	0/0:26,0:26:39.13:0,39,594	0/0:44,0:44:87.29:0,87,1333	0/0:24,0:24:39.13:0,39,572	0/0:13,0:13:30.09:0,30,432	0/0:45,0:45:78.24:0,78,1163	1/1:8,16:24:18.06:428,18,0	0/0:38,0:38:72.15:0,72,807	0/0:35,0:35:66.69:0,67,751	0/0:13,0:13:36.10:0,36,466
chr10	15956739	.	T	TG	2653.06	PASS	AB=0.626;AC=14;AF=0.250;AN=56;BaseQRankSum=-4.746;DP=615;FS=4.548;HRun=9;HaplotypeScore=74.6031;InbreedingCoeff=0.8132;MQ=83.42;MQ0=0;MQRankSum=-3.417;QD=17.23;ReadPosRankSum=-1.628;VQSLOD=3.4926;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,114,985	0/1:5,6:11:9.90:87,0,10	0/0:25,0:25:33.91:0,34,371	0/0:26,0:25:46.52:0,47,367	1/1:8,23:31:45.11:486,45,0	0/0:20,0:20:56.95:0,57,488	0/0:22,0:22:56.96:0,57,489	0/0:16,0:16:29.78:0,30,248	0/0:14,0:14:32.98:0,33,284	1/1:5,12:17:17.06:346,17,0	1/1:4,9:13:20.99:217,21,0	0/0:23,0:23:59.98:0,60,518	0/0:15,0:15:32.92:0,33,277	0/0:24,0:24:62.95:0,63,539	0/0:25,0:25:62.95:0,63,543	0/0:20,0:20:41.90:0,42,346	1/1:5,22:27:63.17:697,63,0	0/0:25,0:25:56.98:0,57,494	0/0:24,0:24:56.98:0,57,494	0/0:18,0:19:45.83:0,46,386	0/0:26,0:26:62.30:0,62,514	0/0:26,0:26:68.96:0,69,595	0/0:24,0:24:59.97:0,60,520	0/0:25,0:25:65.97:0,66,570	0/0:18,0:18:41.97:0,42,361	0/1:9,17:26:21.01:467,0,21	1/1:5,14:20:22.41:379,22,0	1/1:3,6:9:15.04:166,15,0
chr10	15957630	.	CTG	C	6519.64	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=17.297;DP=705;FS=7.960;HRun=0;HaplotypeScore=102.1875;InbreedingCoeff=0.9969;MQ=80.31;MQ0=0;MQRankSum=-4.568;QD=37.04;ReadPosRankSum=3.828;VQSLOD=7.1785;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,144,2608	1/1:0,15:15:39.13:558,39,0	0/0:17,0:17:45.15:0,45,792	0/0:22,0:22:63.14:0,63,1081	1/1:1,23:22:54.65:763,55,0	0/0:15,0:15:42.14:0,42,769	0/0:31,0:31:93.32:0,93,1672	0/0:26,0:26:78.27:0,78,1425	0/0:17,0:17:48.16:0,48,880	1/1:2,37:38:99:1504,105,0	1/1:1,10:11:24.05:344,24,0	0/0:25,0:25:66.23:0,66,1210	0/0:20,0:20:54.12:0,54,886	0/0:37,0:37:99:0,102,1832	0/0:18,0:18:51.17:0,51,924	0/0:19,0:19:51.17:0,51,935	1/1:1,46:47:99:1762,123,0	0/0:23,0:23:66.23:0,66,1210	0/0:20,0:20:57.19:0,57,1029	0/0:25,0:25:72.23:0,72,1288	0/0:78,0:78:99:0,229,4149	0/0:20,0:20:60.21:0,60,1086	0/0:18,0:18:51.17:0,51,929	0/0:17,0:17:45.15:0,45,824	0/0:29,0:29:78.27:0,78,1421	1/1:0,22:21:63.21:901,63,0	1/1:0,13:13:33.11:473,33,0	1/1:0,5:5:15.05:215,15,0
chr10	15958250	.	AG	A	9033.78	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=13.983;DP=679;FS=13.388;HRun=8;HaplotypeScore=82.6647;InbreedingCoeff=0.9992;MQ=73.80;MQ0=0;MQRankSum=-1.775;QD=24.42;ReadPosRankSum=4.462;VQSLOD=4.4349;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,43:49:99:1158,120,0	1/1:2,14:16:32.98:309,33,0	0/0:13,0:14:35.88:0,36,369	0/0:18,0:19:20.48:0,20,395	1/1:7,24:31:63.09:608,63,0	0/0:20,0:20:57.17:0,57,689	0/0:27,0:27:63.19:0,63,761	0/0:22,0:22:51.14:0,51,597	0/0:23,0:23:63.16:0,63,737	1/1:1,29:30:81.12:781,81,0	1/1:1,17:18:51.08:492,51,0	1/1:1,24:25:69.11:666,69,0	0/0:26,0:26:72.21:0,72,856	0/0:28,0:28:78.22:0,78,920	1/1:3,23:26:66.10:637,66,0	1/1:4,24:28:72.11:695,72,0	1/1:1,27:28:63.10:608,63,0	1/1:0,16:16:48.08:464,48,0	0/0:16,0:16:29.11:0,29,416	0/0:35,0:35:90.28:0,90,1086	0/0:22,0:22:57.17:0,57,688	0/0:20,0:20:54.17:0,54,652	0/0:22,0:22:60.17:0,60,708	0/0:15,0:15:42.10:0,42,483	1/1:2,32:34:93.15:898,93,0	1/1:2,23:25:69.05:645,69,0	1/1:4,25:29:66.10:637,66,0	1/1:0,15:15:45.07:434,45,0
chr10	15958600	.	C	CTG	12282.48	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=16.533;DP=911;FS=3.253;HRun=0;HaplotypeScore=119.4090;InbreedingCoeff=1.0000;MQ=92.73;MQ0=0;MQRankSum=-5.199;QD=51.82;ReadPosRankSum=2.982;VQSLOD=5.5662;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,108,1710	1/1:1,11:14:36.12:720,36,0	0/0:43,0:43:99:0,126,1948	0/0:35,0:35:99:0,102,1555	1/1:2,34:38:90.31:1824,90,0	0/0:38,0:38:99:0,114,1760	0/0:30,0:30:90.29:0,90,1438	0/0:39,0:39:99:0,114,1693	0/0:27,0:27:81.26:0,81,1297	1/1:3,25:32:93.28:1750,93,0	1/1:3,26:29:63.22:1277,63,0	0/0:22,0:22:66.20:0,66,1029	0/0:38,0:38:99:0,114,1854	0/0:39,0:39:99:0,117,1864	0/0:45,0:45:99:0,132,2125	0/0:40,0:40:99:0,120,1885	1/1:0,34:35:99:2070,102,0	0/0:21,0:21:63.22:0,63,1027	0/0:32,0:32:96.28:0,96,1444	0/0:40,0:40:99:0,114,1803	0/0:32,0:32:96.27:0,96,1469	0/0:28,0:28:81.28:0,81,1320	0/0:25,0:25:72.24:0,72,1165	0/0:28,0:28:84.27:0,84,1344	0/0:32,0:32:93.29:0,93,1464	1/1:1,36:38:99:2236,114,0	1/1:2,32:37:81.28:1632,81,0	1/1:3,11:14:39.13:774,39,0
chr10	15959888	.	G	GGACAGAGA	4245.83	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-0.069;DP=679;FS=1.207;HRun=0;HaplotypeScore=165.6142;InbreedingCoeff=0.9078;MQ=63.15;MQ0=1;MQRankSum=-6.315;QD=26.05;ReadPosRankSum=-3.001;VQSLOD=3.7537;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:56:99:0,123,2806	1/1:6,0:6:5.18:184,5,0	0/0:30,0:20:14.30:0,14,260	0/0:30,0:20:27.49:0,27,396	1/1:13,7:23:5.17:245,5,0	0/0:22,0:22:33.10:0,33,754	0/0:32,0:32:54.15:0,54,1085	0/0:24,0:24:27.08:0,27,491	0/0:21,0:21:36.11:0,36,837	1/1:16,13:30:45.14:1058,45,0	1/1:4,7:11:3.01:56,3,0	0/0:30,0:30:51.17:0,51,1189	0/0:19,0:19:36.09:0,36,758	0/0:21,0:21:36.09:0,36,738	0/0:23,0:23:54.16:0,54,1245	0/0:22,0:22:48.15:0,48,1069	1/1:14,13:32:18.06:665,18,0	0/0:33,0:33:72.22:0,72,1582	0/0:25,0:25:27.06:0,27,510	0/0:8,0:8:18.06:0,18,416	0/0:45,0:45:84.23:0,84,1877	0/0:11,0:11:18.03:0,18,334	0/0:13,0:13:21.07:0,21,494	0/0:35,0:35:60.14:0,60,1227	0/0:15,0:15:24.08:0,24,604	1/1:27,0:28:37.35:861,37,0	1/1:12,14:26:21.07:807,21,0	1/1:1,3:6:9.03:370,9,0
chr10	15959919	.	GAC	G	252.61	PASS	AB=0.885;AC=4;AF=0.071;AN=56;BaseQRankSum=4.052;DP=751;FS=1.055;HRun=0;HaplotypeScore=106.4510;InbreedingCoeff=-0.0721;MQ=67.21;MQ0=6;MQRankSum=-1.204;QD=2.81;ReadPosRankSum=-4.154;VQSLOD=1.0749;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:57:99:0,168,3041	0/1:5,3:8:30.70:31,0,152	0/0:46,0:28:67.82:0,68,1138	0/0:51,0:23:51.77:0,52,692	0/0:16,0:16:25.70:0,26,365	0/0:20,0:20:54.18:0,54,1032	0/0:35,0:35:99:0,105,1771	0/0:28,0:28:84.29:0,84,1604	0/0:21,0:21:60.19:0,60,1122	0/1:23,0:23:99:120,0,740	0/0:9,0:9:15.03:0,15,239	0/0:31,0:31:90.29:0,90,1660	0/0:26,0:26:69.19:0,69,1229	0/0:27,0:27:78.24:0,78,1428	0/0:34,0:34:99:0,99,1821	0/0:23,0:23:69.21:0,69,1264	0/1:33,0:33:4.06:4,0,567	0/0:29,0:29:84.74:0,85,1570	0/0:22,0:21:60.17:0,60,1053	0/0:13,0:13:33.10:0,33,599	0/0:53,0:53:99:0,153,2770	0/0:20,0:20:57.15:0,57,999	0/0:16,0:16:45.15:0,45,847	0/0:35,0:35:99:0,99,1756	0/0:14,0:14:39.13:0,39,753	0/1:20,6:26:99:201,0,900	0/0:26,0:26:51.14:0,51,776	0/0:9,0:9:18.05:0,18,292
chr10	15962642	.	TC	T	1686.44	PASS	AB=0.884;AC=43;AF=0.768;AN=56;BaseQRankSum=3.992;DP=269;FS=5.052;HRun=11;HaplotypeScore=52.1566;InbreedingCoeff=0.2828;MQ=77.73;MQ0=0;MQRankSum=-2.411;QD=6.88;ReadPosRankSum=2.893;VQSLOD=1.4804;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:7,2:9:9.40:9,0,113	1/1:0,0:3:6.11:18,6,0	0/1:8,1:9:16.47:16,0,49	0/0:15,0:12:13.30:0,13,107	1/1:2,0:7:6.11:18,6,0	1/1:4,12:16:32.94:269,33,0	1/1:0,6:6:11.99:98,12,0	1/1:7,6:14:13.98:104,14,0	1/1:0,8:8:20.98:172,21,0	1/1:2,0:6:10.18:30,10,0	1/1:2,0:5:6.11:18,6,0	0/1:8,1:9:6.60:7,0,142	1/1:2,5:8:17.02:129,17,0	1/1:2,8:10:20.97:172,21,0	0/0:5,0:5:15.04:0,15,159	0/1:11,0:11:6.04:6,0,142	1/1:5,0:14:20.84:60,21,0	0/1:27,0:27:12.93:13,0,423	0/1:6,3:10:2.42:62,0,2	1/1:3,0:3:2.99:24,3,0	1/1:2,14:16:35.95:295,36,0	0/1:3,1:4:12.68:13,0,69	1/1:1,3:4:2.99:25,3,0	1/1:1,3:4:11.99:98,12,0	0/0:4,0:4:9.02:0,9,96	1/1:2,0:12:20.37:59,20,0	1/1:3,0:15:24.44:71,24,0	1/1:1,0:15:22.41:65,22,0
chr10	15962696	.	GTTTC	G	1491.61	PASS	AC=12;AF=0.240;AN=50;BaseQRankSum=7.770;DP=228;FS=3.492;HRun=0;HaplotypeScore=50.6635;InbreedingCoeff=0.8760;MQ=82.02;MQ0=0;MQRankSum=-6.285;QD=33.90;ReadPosRankSum=-1.016;VQSLOD=3.0573;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:33.11:0,33,834	./.	0/0:12,0:10:16.68:0,17,238	0/0:10,0:8:17.98:0,18,192	1/1:0,3:3:9.03:169,9,0	0/0:7,0:7:21.07:0,21,531	0/0:9,0:9:27.09:0,27,609	0/0:34,0:34:93.27:0,93,2070	0/0:5,0:5:12.03:0,12,251	1/1:2,1:3:8.98:103,9,0	./.	0/0:6,0:6:18.06:0,18,420	0/0:9,0:9:24.07:0,24,555	0/0:7,0:7:21.07:0,21,531	0/0:5,0:5:12.04:0,12,303	0/0:10,0:10:27.08:0,27,620	1/1:3,12:16:33.10:572,33,0	0/0:22,0:22:63.18:0,63,1512	0/0:20,0:20:57.18:0,57,1294	0/0:3,0:3:9.03:0,9,190	0/0:5,0:5:15.02:0,15,314	0/0:1,0:1:3:0,3,25	./.	0/0:4,0:4:9.03:0,9,218	0/0:3,0:3:8.99:0,9,162	1/1:3,4:8:18.06:321,18,0	1/1:6,2:9:20.96:250,21,0	1/1:1,4:5:15.04:248,15,0
chr10	15962848	.	G	GA	782.25	PASS	AB=0.893;AC=22;AF=0.393;AN=56;BaseQRankSum=7.163;DP=307;FS=11.501;HRun=14;HaplotypeScore=53.2139;InbreedingCoeff=0.3736;MQ=64.94;MQ0=20;MQRankSum=-6.615;QD=3.83;ReadPosRankSum=-1.009;VQSLOD=-0.4948;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:14,1:15:0.22:0,0,127	1/1:2,0:2:2.84:14,3,0	0/1:26,0:9:1.77:2,0,53	0/1:28,0:8:7.78:8,0,19	1/1:10,0:9:14.16:69,14,0	0/0:11,0:11:18.12:0,18,129	0/1:6,1:5:11.54:12,0,62	0/1:30,4:28:16.43:16,0,219	0/0:1,0:1:2.96:0,3,19	1/1:4,0:4:5.49:26,5,0	1/1:9,0:9:19.89:98,20,0	0/0:6,0:6:8.84:0,9,58	0/1:5,2:7:9.72:10,0,66	0/0:4,0:4:8.82:0,9,58	0/0:4,0:4:8.84:0,9,58	0/0:6,0:6:8.84:0,9,58	1/1:22,0:24:51.18:258,51,0	0/0:24,0:24:50.08:0,50,326	0/1:9,3:11:53.28:53,0,76	0/0:5,0:4:7.90:0,8,44	0/0:5,0:4:5.90:0,6,38	0/0:3,0:3:2.95:0,3,19	0/0:4,0:2:2.91:0,3,19	0/0:7,0:7:14.72:0,15,96	0/0:7,0:7:8.84:0,9,58	1/1:6,0:6:14.11:68,14,0	1/1:7,0:6:8.43:40,8,0	1/1:25,0:25:59.52:289,60,0
chr10	15962860	.	A	AAAAAG	4725.53	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-1.438;DP=289;FS=4.369;HRun=0;HaplotypeScore=54.6146;InbreedingCoeff=0.8367;MQ=72.24;MQ0=4;MQRankSum=-4.850;QD=47.26;ReadPosRankSum=2.145;VQSLOD=4.5797;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:35.97:0,36,506	1/1:1,0:4:6.01:79,6,0	0/0:16,0:9:20.79:0,21,199	0/0:21,0:10:26.02:0,26,237	1/1:4,10:15:10.50:560,11,0	0/0:11,0:11:26.87:0,27,398	0/0:5,0:5:15:0,15,230	0/0:36,0:34:86.51:0,87,1084	0/0:1,0:1:3.01:0,3,53	1/1:0,0:4:9.50:156,10,0	1/1:0,9:10:21.07:560,21,0	0/0:4,0:4:8.99:0,9,158	0/0:9,0:9:23.79:0,24,295	0/0:4,0:4:12.01:0,12,179	0/0:5,0:5:15:0,15,205	0/0:4,0:4:12.03:0,12,185	1/1:12,6:21:58.88:1006,59,0	0/0:24,0:24:61.71:0,62,989	0/0:11,0:11:32.94:0,33,412	0/0:4,0:4:12.03:0,12,170	0/0:3,0:2:6.02:0,6,105	0/0:1,0:1:3.01:0,3,53	0/0:3,0:2:6.01:0,6,79	0/0:7,0:7:18.02:0,18,263	0/0:6,0:6:15:0,15,204	1/1:0,8:9:23.91:430,24,0	1/1:2,1:6:12.03:219,12,0	1/1:4,20:30:72.19:1716,72,0
chr10	15962896	.	C	CTATT	2595.40	PASS	AC=24;AF=0.571;AN=42;BaseQRankSum=-6.061;DP=239;FS=2.378;HRun=0;HaplotypeScore=52.1699;InbreedingCoeff=0.5914;MQ=66.93;MQ0=4;MQRankSum=1.598;QD=23.59;ReadPosRankSum=2.070;VQSLOD=3.1153;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:9:3:0,3,28	1/1:1,2:3:6.02:139,6,0	./.	./.	1/1:6,6:12:18.06:418,18,0	0/0:9,0:9:6.02:0,6,91	./.	./.	0/0:2,0:3:3:0,3,28	1/1:2,1:3:3.01:70,3,0	1/1:7,2:9:6.02:139,6,0	0/0:1,0:5:9.01:0,9,84	1/1:5,1:6:12.04:259,12,0	1/1:1,1:2:3.01:70,3,0	0/0:0,0:2:6.01:0,6,56	0/0:2,0:3:3:0,3,28	1/1:12,14:27:22.16:885,22,0	0/0:14,0:23:15.96:0,16,142	0/0:15,0:14:6.02:0,6,91	./.	./.	./.	1/1:2,1:3:3.01:70,3,0	1/1:1,1:2:3.01:70,3,0	0/0:3,0:10:18.02:0,18,168	1/1:8,1:9:3.01:70,3,0	1/1:2,1:3:3.01:70,3,0	1/1:25,6:31:21.07:487,21,0
chr10	15974159	.	CGTGT	C	1584.94	PASS	AB=0.761;AC=16;AF=0.286;AN=56;BaseQRankSum=-1.622;DP=612;FS=2.393;HRun=0;HaplotypeScore=118.9000;InbreedingCoeff=0.6787;MQ=69.48;MQ0=16;MQRankSum=-0.615;QD=10.93;ReadPosRankSum=2.821;VQSLOD=3.0967;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:32:20.81:0,21,357	1/1:4,5:9:12.04:188,12,0	0/0:56,0:20:3.01:0,3,42	0/0:47,0:22:3.48:0,3,34	1/1:10,0:18:2.99:28,3,0	0/0:12,0:15:12.01:0,12,155	0/0:10,0:16:12.04:0,12,228	0/0:22,0:22:16.87:0,17,268	0/0:13,0:18:20.99:0,21,381	1/1:11,4:16:12.03:164,12,0	1/1:2,10:13:18.53:264,19,0	0/0:11,0:18:18.02:0,18,333	0/0:12,0:18:30.57:0,31,617	0/0:10,0:17:17.39:0,17,375	0/0:13,0:28:24.01:0,24,368	0/0:10,0:19:15.52:0,16,264	1/1:12,5:18:15.03:197,15,0	0/0:10,0:23:36.12:0,36,665	0/1:15,1:19:29.37:29,0,144	0/0:10,0:19:24.05:0,24,406	0/0:32,1:38:26.81:0,27,453	0/0:14,0:18:23.44:0,23,444	0/0:7,0:10:3.01:0,3,71	0/0:27,0:29:32.85:0,33,632	0/0:6,0:16:12.04:0,12,228	1/1:14,7:22:21.04:286,21,0	0/1:9,7:16:49.88:260,0,50	1/1:5,7:13:24.07:356,24,0
chr10	15976087	.	GT	G	4272.67	PASS	AB=0.624;AC=43;AF=0.768;AN=56;BaseQRankSum=-0.604;DP=572;FS=4.494;HRun=15;HaplotypeScore=60.8072;InbreedingCoeff=0.0870;MQ=75.57;MQ0=1;MQRankSum=-0.421;QD=8.11;ReadPosRankSum=3.310;VQSLOD=4.1521;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,21:32:11.99:225,12,0	1/1:0,5:5:14.78:96,15,0	0/0:26,0:15:11.91:0,12,92	0/0:19,0:13:8.19:0,8,53	0/1:8,20:28:46.40:248,0,46	0/1:11,10:21:15.04:124,0,15	1/1:6,10:16:23.61:154,24,0	1/1:11,16:28:40.30:254,40,0	0/1:3,8:11:7.19:46,0,7	1/1:3,20:24:52.16:332,52,0	1/1:5,10:15:23.48:154,23,0	1/1:6,8:16:16.65:102,17,0	1/1:5,13:18:23.49:154,23,0	0/1:6,12:18:8.84:78,0,9	0/1:6,21:29:3.17:210,0,3	1/1:9,19:29:7.83:171,8,0	0/1:10,8:18:28.76:58,0,29	0/1:9,12:23:8.13:164,0,8	1/1:10,12:22:11.56:184,12,0	1/1:7,21:28:50.01:327,50,0	1/1:2,7:9:20.67:135,21,0	1/1:2,4:6:8.82:58,9,0	1/1:5,7:13:19.70:121,20,0	0/1:8,8:16:11.69:62,0,12	0/1:13,16:30:60.26:158,0,60	1/1:10,18:30:31.85:258,32,0	1/1:11,17:27:19.06:228,19,0	1/1:0,14:14:26.60:173,27,0
chr10	15977134	.	T	TTCTATCTA	7294.56	PASS	AB=0.905;AC=42;AF=0.808;AN=52;BaseQRankSum=0.919;DP=688;FS=11.154;HRun=0;HaplotypeScore=169.1269;InbreedingCoeff=0.6352;MQ=69.08;MQ0=3;MQRankSum=-3.838;QD=12.91;ReadPosRankSum=-3.872;VQSLOD=1.5216;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:27:6.02:88,6,0	1/1:5,0:7:2.99:24,3,0	./.	./.	0/1:26,0:34:55.82:87,0,56	1/1:18,15:35:18.06:709,18,0	1/1:17,0:17:11.94:151,12,0	0/1:34,0:33:0:0,0,0	1/1:18,0:18:10.59:140,11,0	1/1:16,0:25:26.96:243,27,0	1/1:11,0:13:2.99:25,3,0	1/1:18,10:29:20.98:817,21,0	0/0:28,0:28:33.11:0,33,675	0/0:17,0:17:27.09:0,27,661	1/1:20,12:32:27.09:1051,27,0	1/1:22,7:29:5.23:125,5,0	1/1:9,6:16:9.03:363,9,0	1/1:7,4:12:9.03:170,9,0	1/1:14,0:15:2.99:24,3,0	1/1:26,10:38:18.06:704,18,0	1/1:13,0:25:26.94:219,27,0	1/1:10,0:24:23.96:233,24,0	0/0:23,0:23:30.09:0,30,655	0/0:12,0:12:15.05:0,15,367	1/1:27,0:44:11.95:383,12,0	1/1:26,8:35:27.08:670,27,0	1/1:16,13:31:15.05:596,15,0	1/1:11,10:23:12.04:474,12,0
chr10	15978217	.	CGGGGG	C	1726.51	PASS	AB=0.808;AC=18;AF=0.321;AN=56;BaseQRankSum=5.600;DP=376;FS=5.276;HRun=17;HaplotypeScore=81.5044;InbreedingCoeff=0.5492;MQ=68.57;MQ0=5;MQRankSum=-3.364;QD=12.42;ReadPosRankSum=6.650;VQSLOD=-0.4651;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:14:3.90:0,4,39	1/1:3,4:8:11.83:164,12,0	0/0:31,0:10:1.86:0,2,92	0/0:17,0:10:12.40:0,12,117	1/1:7,3:14:14.84:180,15,0	0/0:12,0:12:5.96:0,6,45	0/0:17,0:19:18.49:0,18,140	0/0:4,0:4:0:0,0,0	0/0:8,0:11:5.96:0,6,45	1/1:9,5:14:17.72:249,18,0	0/1:5,4:9:6.03:124,0,6	0/0:10,0:10:0:0,0,0	0/0:17,0:17:16.24:0,16,165	0/0:12,0:12:9.01:0,9,102	0/0:16,0:16:3.56:0,4,14	0/0:17,0:18:18.06:0,18,295	1/1:10,11:21:20.88:316,21,0	0/1:11,0:12:0.31:0,0,99	1/1:4,0:5:1.17:3,1,0	0/0:7,0:7:0:0,0,0	0/0:14,0:14:11.16:0,11,134	0/0:8,0:8:3:0,3,25	0/0:8,0:9:3.01:0,3,51	0/0:4,0:4:4.37:0,4,56	0/0:9,0:11:2.37:0,2,8	1/1:18,3:24:20.63:266,21,0	1/1:12,12:26:38.50:543,38,0	1/1:4,1:5:2.81:45,3,0
chr10	15978821	.	GACAC	G	3641.16	PASS	AB=0.984;AC=22;AF=0.393;AN=56;BaseQRankSum=1.002;DP=507;FS=14.816;HRun=0;HaplotypeScore=95.8703;InbreedingCoeff=0.8293;MQ=71.81;MQ0=10;MQRankSum=-2.016;QD=15.56;ReadPosRankSum=1.715;VQSLOD=2.1663;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:30,1:31:15.36:15,0,666	0/0:7,0:8:15.05:0,15,308	0/0:26,0:14:3.01:0,3,71	0/0:35,0:21:3.48:0,3,72	0/0:10,0:19:22.78:0,23,358	1/1:7,9:17:18.05:265,18,0	1/1:13,9:24:33.03:482,33,0	0/1:15,0:14:0:0,0,0	1/1:6,7:13:17.96:284,18,0	0/0:8,0:13:27.09:0,27,482	0/0:13,0:18:23.11:0,23,410	0/0:13,0:16:27.30:0,27,578	1/1:6,12:18:27.09:426,27,0	1/1:2,10:13:21.06:312,21,0	0/0:25,0:28:41.88:0,42,917	0/0:21,0:26:47.10:0,47,894	0/0:4,0:9:15.05:0,15,281	0/0:13,0:17:38.29:0,38,732	0/0:8,0:12:13.25:0,13,71	1/1:7,7:16:27.04:361,27,0	1/1:15,6:21:12.04:189,12,0	1/1:8,7:16:21.06:312,21,0	1/1:7,7:14:15.05:237,15,0	1/1:16,19:36:48.16:758,48,0	0/0:13,0:13:20.71:0,21,361	0/0:13,0:12:18.04:0,18,368	0/0:4,0:9:12.04:0,12,223	0/0:2,0:9:21.07:0,21,379
chr10	15981086	.	AAAAC	A	21346.30	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=1.394;DP=743;FS=16.596;HRun=0;HaplotypeScore=128.8429;InbreedingCoeff=0.9636;MQ=67.76;MQ0=8;MQRankSum=-3.480;QD=31.12;ReadPosRankSum=5.802;VQSLOD=3.2791;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,24:34:41.33:920,41,0	1/1:1,4:5:9.03:153,9,0	0/0:32,0:26:22.18:0,22,723	0/0:25,0:23:26.96:0,27,746	1/1:5,36:40:99:1475,99,0	1/1:6,25:31:63.22:1069,63,0	1/1:7,16:23:27.09:458,27,0	1/1:8,20:28:31.92:879,32,0	1/1:2,19:21:42.14:713,42,0	1/1:11,30:40:90.30:1441,90,0	1/1:4,27:31:66.18:1050,66,0	1/1:6,13:19:24.08:406,24,0	1/1:9,19:28:41.98:713,42,0	1/1:4,22:26:48.16:814,48,0	1/1:7,22:29:48.16:802,48,0	1/1:5,20:25:23.77:406,24,0	1/1:13,20:33:32.93:560,33,0	1/1:5,12:15:33.07:519,33,0	1/1:6,15:19:42.13:635,42,0	1/1:7,28:34:72.10:1101,72,0	1/1:5,17:22:45.15:764,45,0	1/1:4,18:22:51.06:765,51,0	1/1:3,20:22:54.02:916,54,0	1/1:4,10:14:24.08:402,24,0	1/1:2,20:22:36.12:609,36,0	1/1:7,38:45:99:1907,114,0	1/1:5,37:42:87.34:1463,87,0	1/1:0,8:8:24.08:407,24,0
chr10	15983047	.	CA	C	1570.64	PASS	AB=0.859;AC=19;AF=0.339;AN=56;BaseQRankSum=2.294;DP=577;FS=0.422;HRun=13;HaplotypeScore=68.9564;InbreedingCoeff=0.3285;MQ=72.12;MQ0=16;MQRankSum=1.322;QD=4.86;ReadPosRankSum=3.687;VQSLOD=1.6233;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:8,1:9:9.82:10,0,76	0/1:3,5:8:3.39:61,0,3	0/1:65,0:24:30.89:31,0,108	0/0:43,1:20:7.96:0,8,82	1/1:10,17:29:56.37:381,56,0	0/0:21,0:23:31.96:0,32,440	0/0:9,0:9:23.15:0,23,174	0/1:39,0:39:0.31:0,0,405	0/0:15,0:15:41.95:0,42,368	1/1:8,17:25:0.55:315,1,0	0/1:7,9:16:55.60:104,0,56	0/0:17,0:17:37.52:0,38,262	0/0:17,0:18:45.97:0,46,383	0/0:14,0:14:27.43:0,27,254	0/0:21,0:22:41.89:0,42,387	0/0:16,0:16:16.90:0,17,280	1/1:6,11:16:20.84:151,21,0	0/0:18,0:18:15.71:0,16,282	0/0:18,0:19:49.48:0,49,449	0/1:21,1:23:13.67:14,0,331	0/0:10,0:10:24.38:0,24,220	0/1:11,0:11:3.83:4,0,172	0/0:18,0:18:35.35:0,35,305	0/1:5,0:4:15.85:16,0,23	0/0:10,0:11:5.19:0,5,196	1/1:17,9:26:29.95:309,30,0	0/1:12,17:31:3.63:153,0,4	1/1:11,7:17:31.28:199,31,0
chr10	15983529	.	TATATATATACACAC	T	281.89	PASS	AB=1.000;AC=12;AF=0.462;AN=26;BaseQRankSum=1.740;DP=64;FS=9.863;HRun=0;HaplotypeScore=33.2481;InbreedingCoeff=0.0938;MQ=41.82;MQ0=2;MQRankSum=-1.263;QD=7.62;ReadPosRankSum=-2.150;VQSLOD=-0.4559;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,0:6:0.03:0,0,0	./.	./.	./.	./.	./.	./.	0/1:12,0:11:74.76:75,0,271	./.	0/0:1,0:1:3.01:0,3,59	0/1:1,0:1:0:0,0,0	./.	./.	./.	0/1:2,0:2:44.48:56,0,44	0/0:2,1:3:0.47:0,0,1	0/0:6,0:6:2.62:0,3,42	1/1:3,0:3:3.01:60,3,0	0/0:2,0:2:6.02:0,6,197	./.	./.	./.	./.	./.	1/1:7,0:7:6.02:123,6,0	1/1:2,0:1:3:25,3,0	0/1:3,0:3:38.93:39,0,44	0/0:5,0:5:9.03:0,9,193
chr10	15983537	.	TACACACACAC	T	427.05	PASS	AB=0.857;AC=11;AF=0.688;AN=16;DP=73;FS=0.000;HRun=0;HaplotypeScore=33.2573;MQ=42.72;MQ0=5;QD=11.54;VQSLOD=0.5440;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:3,0:6:0.18:0,0,0	./.	./.	./.	./.	./.	./.	1/1:8,8:15:20.96:331,21,0	./.	./.	0/0:0,0:1:0:0,0,0	./.	./.	./.	1/1:1,0:2:2.84:14,3,0	./.	0/1:5,0:6:0:0,0,0	0/0:4,0:3:0:0,0,0	./.	./.	./.	./.	./.	./.	./.	1/1:1,0:1:3.01:70,3,0	1/1:1,0:4:2.75:79,3,0	./.
chr10	15984189	.	GT	G	6049.56	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=18.016;DP=640;FS=2.741;HRun=5;HaplotypeScore=74.5004;InbreedingCoeff=0.9985;MQ=88.10;MQ0=0;MQRankSum=-3.512;QD=31.84;ReadPosRankSum=1.545;VQSLOD=5.5940;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:57.05:0,57,706	1/1:0,10:10:30.09:340,30,0	0/0:18,0:18:51.17:0,51,684	0/0:27,0:27:75.24:0,75,1000	1/1:1,29:30:87.25:983,87,0	0/0:22,0:22:60.18:0,60,804	0/0:17,0:17:51.15:0,51,669	0/0:34,0:34:96.31:0,96,1287	0/0:25,0:25:69.22:0,69,927	1/1:0,31:31:93.27:1055,93,0	1/1:5,24:29:66.18:748,66,0	0/0:23,0:23:69.21:0,69,914	0/0:23,0:23:63.21:0,63,861	0/0:15,0:15:42.13:0,42,555	0/0:34,0:34:93.31:0,93,1272	0/0:22,0:22:63.20:0,63,845	1/1:0,18:18:48.14:544,48,0	0/0:6,0:6:18.06:0,18,246	0/0:13,0:13:39.11:0,39,497	0/0:27,0:27:72.24:0,72,984	0/0:36,0:36:96.31:0,96,1298	0/0:14,0:14:39.13:0,39,530	0/0:22,0:22:63.20:0,63,845	0/0:25,0:25:75.23:0,75,1009	0/0:26,0:26:78.24:0,78,1050	1/1:1,28:29:84.24:952,84,0	1/1:0,29:29:84.24:952,84,0	1/1:0,14:14:42.12:476,42,0
chr10	15986219	.	TG	T	3798.77	PASS	AB=0.798;AC=48;AF=0.960;AN=50;BaseQRankSum=0.379;DP=630;FS=1.882;HRun=1;HaplotypeScore=71.6119;InbreedingCoeff=-0.0680;MQ=20.36;MQ0=183;MQRankSum=0.277;QD=6.26;ReadPosRankSum=2.149;VQSLOD=0.8139;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:28,12:12:52.82:81,0,53	1/1:2,9:6:5.80:32,6,0	./.	./.	1/1:6,28:22:32.45:219,32,0	1/1:8,9:10:23.65:157,24,0	1/1:7,8:7:8.65:48,9,0	1/1:7,9:8:23.56:158,24,0	1/1:9,21:20:29.30:186,29,0	1/1:4,17:13:29.51:204,30,0	1/1:7,20:17:41.13:254,41,0	1/1:9,16:17:32.34:209,32,0	1/1:7,17:13:11.82:79,12,0	1/1:3,27:24:37.93:230,38,0	1/1:10,25:22:35.45:234,35,0	1/1:5,27:23:44.41:303,44,0	1/1:31,6:6:8.88:60,9,0	0/1:19,5:7:51.45:64,0,51	1/1:5,9:4:11.85:86,12,0	1/1:3,22:14:32.06:181,32,0	./.	1/1:1,22:16:23.58:151,24,0	1/1:8,13:10:17.67:121,18,0	1/1:17,4:3:2.98:21,3,0	1/1:1,12:6:5.85:34,6,0	1/1:5,16:13:38.21:246,38,0	1/1:5,32:30:61.84:401,62,0	1/1:12,2:2:5.94:42,6,0
chr10	15986221	.	CT	C	3809.67	PASS	AB=0.800;AC=48;AF=0.960;AN=50;BaseQRankSum=-0.583;DP=628;FS=2.479;HRun=1;HaplotypeScore=69.6366;InbreedingCoeff=-0.0650;MQ=19.91;MQ0=192;MQRankSum=1.427;QD=6.30;ReadPosRankSum=1.417;VQSLOD=0.7794;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:30,12:13:54.80:81,0,55	1/1:1,9:5:5.80:32,6,0	./.	./.	1/1:8,26:21:32.41:206,32,0	1/1:6,10:9:23.72:165,24,0	1/1:7,8:6:8.41:49,8,0	1/1:6,10:8:23.61:161,24,0	1/1:6,21:17:29.30:185,29,0	1/1:6,14:12:29.51:204,30,0	1/1:6,21:17:41.23:259,41,0	1/1:8,16:16:32.04:204,32,0	1/1:6,17:14:11.82:79,12,0	1/1:1,28:23:38.02:235,38,0	1/1:7,25:19:35.45:233,35,0	1/1:4,27:22:44.41:301,44,0	1/1:34,6:6:11.85:80,12,0	0/1:18,5:6:10.98:67,0,11	1/1:5,9:4:11.85:85,12,0	1/1:3,22:14:32.06:181,32,0	./.	1/1:3,22:16:23.58:150,24,0	1/1:9,13:10:17.63:110,18,0	1/1:18,4:2:2.98:21,3,0	1/1:2,12:6:5.85:34,6,0	1/1:6,16:14:38.21:246,38,0	1/1:4,33:29:61.92:402,62,0	1/1:12,2:2:5.94:42,6,0
chr10	15993849	.	TAA	T	3868.90	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-3.524;DP=543;FS=0.782;HRun=13;HaplotypeScore=84.6964;InbreedingCoeff=0.9813;MQ=77.55;MQ0=1;MQRankSum=-0.752;QD=22.49;ReadPosRankSum=5.814;VQSLOD=3.4645;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:20:50.61:0,51,662	1/1:2,5:7:18.02:174,18,0	0/0:26,0:18:20.48:0,20,137	0/0:18,0:12:7.67:0,8,92	1/1:4,28:34:80.51:749,81,0	0/0:5,0:18:33.05:0,33,321	0/0:3,0:10:21.03:0,21,200	0/0:11,0:33:78.91:0,79,740	0/0:3,0:16:24.04:0,24,229	1/1:3,22:26:56.99:602,57,0	1/1:1,23:24:69.07:660,69,0	0/0:13,0:16:41.62:0,42,540	0/0:5,0:21:57.11:0,57,598	0/0:4,0:22:57.04:0,57,560	0/0:18,0:19:56.32:0,56,720	0/0:23,0:23:54.11:0,54,708	1/1:4,16:20:51.05:487,51,0	0/0:20,0:20:47.07:0,47,576	0/0:12,0:20:36.94:0,37,368	0/0:4,0:23:63.96:0,64,658	0/0:2,0:11:24.04:0,24,229	0/0:2,0:10:21.04:0,21,224	0/0:4,0:17:41.70:0,42,384	0/0:1,0:9:24.04:0,24,229	0/0:19,0:19:54.17:0,54,757	1/1:3,15:19:38.97:428,39,0	1/1:3,28:33:31.02:599,31,0	1/1:0,9:9:18.02:170,18,0
chr10	16001181	.	ATT	A	6207.21	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=15.299;DP=753;FS=5.588;HRun=6;HaplotypeScore=88.0884;InbreedingCoeff=0.9986;MQ=79.54;MQ0=1;MQRankSum=-1.964;QD=33.02;ReadPosRankSum=3.118;VQSLOD=4.5580;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:87.27:0,87,1509	1/1:1,14:15:39.13:520,39,0	0/0:22,0:22:54.11:0,54,868	0/0:15,0:15:42.09:0,42,650	1/1:1,25:26:57.17:755,57,0	0/0:38,0:38:99:0,105,1787	0/0:25,0:25:72.23:0,72,1234	0/0:40,0:40:99:0,117,2102	0/0:23,0:23:69.20:0,69,1205	1/1:1,27:28:81.23:1048,81,0	1/1:3,23:26:63.20:838,63,0	0/0:30,0:30:84.23:0,84,1424	0/0:38,0:38:99:0,108,1894	0/0:26,0:26:78.26:0,78,1378	0/0:47,0:47:99:0,141,2513	0/0:34,0:34:99:0,102,1810	1/1:3,19:22:57.18:760,57,0	0/0:24,0:24:69.24:0,69,1235	0/0:15,0:15:39.13:0,39,677	0/0:30,0:30:87.28:0,87,1508	0/0:30,0:30:84.28:0,84,1477	0/0:27,0:27:81.27:0,81,1430	0/0:21,0:21:51.17:0,51,919	0/0:20,0:20:54.17:0,54,934	0/0:29,0:29:84.22:0,84,1393	1/1:3,26:29:78.20:1005,78,0	1/1:1,30:30:78.26:1040,78,0	1/1:5,6:11:18.05:240,18,0
chr10	16003613	.	TCACACACACACACACACA	T	5027.60	PASS	AB=0.775;AC=30;AF=0.600;AN=50;BaseQRankSum=4.767;DP=575;FS=8.085;HRun=0;HaplotypeScore=248.6000;InbreedingCoeff=0.5708;MQ=65.59;MQ0=12;MQRankSum=-3.655;QD=15.96;ReadPosRankSum=-1.076;VQSLOD=1.8762;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:23.93:0,24,783	./.	./.	./.	1/1:15,6:21:6.45:243,6,0	1/1:14,0:14:3.01:42,3,0	1/1:16,0:16:6.83:112,7,0	0/0:25,0:25:6.55:0,7,20	1/1:17,1:19:9.03:363,9,0	0/0:17,0:17:2.74:0,3,12	1/1:11,3:15:9.03:392,9,0	0/0:19,0:19:9.03:0,9,292	1/1:22,6:26:8.66:432,9,0	1/1:17,2:20:12.04:478,12,0	0/0:22,0:28:21.07:0,21,550	0/0:19,0:19:21.06:0,21,564	1/1:15,1:17:1.46:114,1,0	0/0:15,0:17:18.33:0,18,490	0/0:12,0:12:0:0,0,0	1/1:14,6:21:12.04:493,12,0	1/1:34,1:35:6.02:232,6,0	1/1:15,0:16:9.02:357,9,0	1/1:8,4:12:6.02:244,6,0	0/1:26,4:30:11.92:280,0,12	0/0:17,0:23:15.03:0,15,286	1/1:11,5:16:12.02:250,12,0	1/1:20,7:27:9.90:575,10,0	0/1:3,3:6:18.34:422,0,18
chr10	16005506	.	GT	G	1516.98	PASS	AB=0.839;AC=18;AF=0.321;AN=56;BaseQRankSum=2.963;DP=569;FS=4.545;HRun=15;HaplotypeScore=79.7827;InbreedingCoeff=0.6839;MQ=79.72;MQ0=3;MQRankSum=-0.699;QD=7.51;ReadPosRankSum=3.342;VQSLOD=3.1438;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:30:45.76:0,46,262	1/1:1,8:9:14.39:96,14,0	0/0:44,1:22:8.60:0,9,101	0/0:20,0:15:12.49:0,12,64	1/1:4,8:14:4.34:139,4,0	0/0:12,0:12:25.23:0,25,211	0/0:8,2:11:4.55:0,5,149	0/0:32,0:35:30.66:0,31,396	0/0:15,0:15:32.88:0,33,273	1/1:1,11:12:32.50:210,32,0	1/1:9,14:24:41.12:264,41,0	0/0:6,0:23:32.76:0,33,203	0/0:22,0:22:46.15:0,46,351	0/0:17,0:17:41.94:0,42,356	0/0:6,0:15:24.11:0,24,137	0/0:8,0:23:32.53:0,33,182	1/1:4,22:28:30.94:312,31,0	0/0:7,0:23:31.72:0,32,190	0/0:20,0:20:15.57:0,16,240	0/1:27,2:30:2.83:3,0,414	0/0:10,0:10:23.98:0,24,208	0/0:11,1:12:10.52:0,11,205	0/1:10,3:13:27.79:28,0,155	0/1:6,0:6:7.23:7,0,67	0/0:12,1:34:24.28:0,24,235	1/1:6,13:19:29.32:192,29,0	0/1:9,19:28:0.34:237,0,0	1/1:9,8:18:24.23:222,24,0
chr10	16009013	.	T	TGGAGGACAAA	20648.16	PASS	AC=14;AF=0.259;AN=54;BaseQRankSum=-7.735;DP=698;FS=0.703;HRun=0;HaplotypeScore=196.8632;InbreedingCoeff=0.9988;MQ=89.08;MQ0=0;MQRankSum=-17.196;QD=123.64;ReadPosRankSum=0.336;VQSLOD=4.9290;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:84.29:0,84,2701	1/1:4,7:13:33.11:1535,33,0	0/0:34,0:34:76.09:0,76,2326	0/0:24,0:24:68.98:0,69,1926	1/1:8,17:25:66.18:2914,66,0	0/0:27,0:27:75.24:0,75,2389	0/0:9,0:9:27.09:0,27,839	0/0:45,0:45:99:0,126,3880	0/0:22,0:22:66.20:0,66,1947	1/1:6,19:28:78.27:3964,78,0	1/1:8,13:25:63.11:2522,63,0	0/0:35,0:35:99:0,102,3260	0/0:49,0:49:99:0,141,4508	0/0:23,0:23:63.20:0,63,1948	0/0:31,0:31:90.31:0,90,2907	0/0:36,0:36:99:0,102,3228	1/1:5,5:13:27.05:1271,27,0	0/0:7,0:7:21.07:0,21,691	0/0:21,0:21:60.19:0,60,1802	0/0:28,0:28:81.28:0,81,2600	0/0:27,0:27:81.26:0,81,2436	0/0:20,0:20:60.21:0,60,1952	0/0:17,0:17:47.85:0,48,1466	0/0:21,0:21:57.20:0,57,1773	0/0:22,0:22:66.20:0,66,2100	1/1:4,23:30:87.27:4287,87,0	1/1:11,20:31:87.26:4155,87,0	./.
chr10	16009601	.	CT	C	1276.19	PASS	AB=0.837;AC=21;AF=0.375;AN=56;BaseQRankSum=6.741;DP=598;FS=9.701;HRun=15;HaplotypeScore=71.8781;InbreedingCoeff=0.4425;MQ=66.62;MQ0=1;MQRankSum=-0.480;QD=4.24;ReadPosRankSum=4.787;VQSLOD=0.6097;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,1:26:22.38:0,22,292	1/1:4,6:11:2.44:72,2,0	0/0:11,0:8:8.91:0,9,79	0/1:10,0:8:19.29:19,0,19	1/1:12,11:26:5.09:131,5,0	0/0:13,0:13:35.88:0,36,301	0/1:13,3:16:50.08:50,0,105	0/0:35,0:36:19.64:0,20,276	0/0:21,1:22:22.64:0,23,301	1/1:8,15:26:24.58:208,25,0	0/1:9,15:26:2.72:216,0,3	0/0:24,2:27:34.40:0,34,393	0/0:32,0:32:56.85:0,57,466	0/1:25,4:29:2.05:2,0,340	0/1:24,3:27:0.39:0,0,268	0/0:19,0:19:29.98:0,30,261	1/1:17,8:27:35.35:209,35,0	0/0:6,0:6:11.98:0,12,101	0/0:21,0:23:16.41:0,16,230	0/0:25,0:26:42.36:0,42,378	0/0:17,0:18:23.14:0,23,224	0/1:13,3:17:12.93:13,0,256	0/1:12,4:17:21.97:22,0,189	0/0:20,0:20:29.93:0,30,250	0/0:18,0:18:28.33:0,28,234	1/1:15,11:28:3.61:149,4,0	1/1:5,17:22:32.47:211,32,0	1/1:5,11:17:4.98:152,5,0
chr10	16012634	.	A	ATT	5686.82	PASS	AC=14;AF=0.259;AN=54;BaseQRankSum=-10.534;DP=552;FS=0.381;HRun=9;HaplotypeScore=66.0800;InbreedingCoeff=0.9908;MQ=74.45;MQ0=0;MQRankSum=-0.249;QD=37.41;ReadPosRankSum=1.008;VQSLOD=4.9657;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:69.10:0,69,704	1/1:0,7:7:21.07:323,21,0	0/0:14,0:14:17.95:0,18,189	0/0:14,0:15:11.55:0,12,238	1/1:6,20:27:58.35:1011,58,0	0/0:26,0:26:60.09:0,60,639	0/0:19,0:19:45.08:0,45,479	0/0:28,0:28:54.04:0,54,558	0/0:20,0:20:57.11:0,57,599	1/1:4,20:26:62.66:907,63,0	1/1:4,17:21:51.13:758,51,0	0/0:18,0:18:51.10:0,51,535	0/0:21,0:21:34.09:0,34,572	0/0:18,0:18:39.05:0,39,415	0/0:24,0:24:69.15:0,69,726	0/0:26,0:26:69.13:0,69,725	1/1:0,20:19:56.68:840,57,0	0/0:12,0:13:24.02:0,24,311	0/0:23,0:23:51.07:0,51,534	0/0:19,0:19:57.13:0,57,599	0/0:13,0:13:39.10:0,39,415	0/0:10,0:10:27.04:0,27,279	0/0:13,0:13:33.07:0,33,351	0/0:24,0:24:69.17:0,69,734	0/0:32,0:32:81.18:0,81,862	1/1:5,24:30:75.20:1088,75,0	1/1:0,20:20:51.15:761,51,0	./.
chr10	16016449	.	T	TA	2662.27	PASS	AB=0.846;AC=16;AF=0.286;AN=56;BaseQRankSum=-7.186;DP=520;FS=4.583;HRun=12;HaplotypeScore=53.6391;InbreedingCoeff=0.7798;MQ=67.88;MQ0=2;MQRankSum=0.728;QD=15.48;ReadPosRankSum=1.041;VQSLOD=4.5872;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:48.15:0,48,351	0/1:5,4:9:6.89:102,0,7	0/0:18,0:9:5.37:0,5,28	0/0:9,0:6:2.72:0,3,12	1/1:1,19:22:50.92:481,51,0	0/0:18,0:18:29.73:0,30,217	0/1:5,0:6:5.87:6,0,76	0/0:36,0:37:9.85:0,10,362	0/0:13,0:13:23.79:0,24,175	1/1:9,19:29:34.99:477,35,0	1/1:4,12:16:30:282,30,0	0/0:22,0:22:46.71:0,47,334	0/0:22,0:22:50.60:0,51,369	0/0:15,0:16:31.41:0,31,211	0/0:25,1:26:36.37:0,36,429	0/0:24,1:25:20.34:0,20,319	1/1:3,17:20:36.01:340,36,0	0/0:14,0:14:32.28:0,32,228	0/0:15,0:16:37.81:0,38,267	0/0:23,0:23:59.53:0,60,432	0/0:10,0:10:26.84:0,27,197	0/0:2,0:2:5.97:0,6,44	0/0:16,1:17:9.26:0,9,223	0/0:15,0:16:31.78:0,32,222	0/0:23,0:23:53.63:0,54,392	1/1:3,15:19:44.88:411,45,0	1/1:4,21:27:25.91:386,26,0	1/1:2,21:24:41.39:374,41,0
chr10	16016920	.	G	GTT	5301.72	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=8.499;DP=563;FS=0.384;HRun=9;HaplotypeScore=82.5337;InbreedingCoeff=0.9230;MQ=59.26;MQ0=5;MQRankSum=-8.356;QD=30.65;ReadPosRankSum=-1.600;VQSLOD=4.7438;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:80.69:0,81,952	1/1:5,6:11:26.45:402,26,0	0/0:16,0:10:20.10:0,20,163	0/1:12,0:8:9.03:9,0,58	1/1:13,16:27:61.97:875,62,0	0/0:21,0:21:61.98:0,62,666	0/0:23,0:22:60.05:0,60,708	0/0:29,0:30:66.50:0,66,782	0/0:12,0:12:27.07:0,27,317	1/1:3,12:14:36.10:501,36,0	1/1:6,12:18:49.60:761,50,0	0/0:18,0:18:51.15:0,51,613	0/0:23,0:22:63.16:0,63,735	0/0:14,0:13:30.09:0,30,365	0/0:25,0:25:69.20:0,69,824	0/0:20,0:19:48.13:0,48,570	1/1:13,15:29:60.10:853,60,0	0/0:26,0:26:51.11:0,51,598	0/0:29,0:28:69.18:0,69,811	0/0:26,0:26:73.83:0,74,856	0/0:10,0:10:27.07:0,27,313	0/0:21,0:21:54.17:0,54,656	0/0:13,0:13:36.08:0,36,410	0/0:15,0:13:33.08:0,33,384	0/0:14,0:13:29.83:0,30,360	1/1:11,12:24:60.03:855,60,0	1/1:12,8:21:42.79:582,43,0	1/1:3,10:13:30.02:463,30,0
chr10	16016927	.	G	GTT	3815.31	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=13.925;DP=555;FS=3.621;HRun=10;HaplotypeScore=94.3437;InbreedingCoeff=0.9513;MQ=55.54;MQ0=10;MQRankSum=-8.888;QD=24.46;ReadPosRankSum=-2.431;VQSLOD=3.1118;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:34:64.31:0,64,666	1/1:4,6:10:20.55:269,21,0	0/0:13,0:7:2.96:0,3,21	0/0:12,0:8:6.70:0,7,37	1/1:20,14:31:61.04:653,61,0	0/0:19,0:20:41.98:0,42,473	0/0:24,0:21:54.07:0,54,541	0/0:31,0:30:52.53:0,53,520	0/0:8,0:9:26.80:0,27,256	1/1:6,7:12:26.94:334,27,0	1/1:9,10:19:38.14:409,38,0	0/0:17,0:17:42.08:0,42,426	0/0:23,0:21:41.79:0,42,479	0/0:12,0:11:27.05:0,27,275	0/0:24,0:24:60.10:0,60,602	0/0:19,0:17:45.08:0,45,457	1/1:15,12:29:48.69:560,49,0	0/0:28,0:27:42.03:0,42,427	0/0:27,0:27:47.75:0,48,537	0/0:26,0:26:61.86:0,62,602	0/0:10,0:10:15.02:0,15,153	0/0:23,0:23:57.06:0,57,567	0/0:16,0:15:26.98:0,27,267	0/0:14,0:12:27.06:0,27,275	0/0:14,0:14:22.27:0,22,293	1/1:3,15:21:50.11:645,50,0	1/1:10,9:19:41.99:530,42,0	1/1:0,10:11:30.07:415,30,0
chr10	16018298	.	AGT	A	3386.53	PASS	AB=0.822;AC=42;AF=0.808;AN=52;BaseQRankSum=2.432;DP=619;FS=8.466;HRun=0;HaplotypeScore=92.5064;InbreedingCoeff=0.3769;MQ=64.67;MQ0=10;MQRankSum=1.711;QD=6.45;ReadPosRankSum=3.224;VQSLOD=2.4093;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:20,8:27:12.03:130,12,0	1/1:6,4:10:11.87:112,12,0	./.	./.	1/1:19,7:27:17.46:138,17,0	0/1:15,7:22:26.73:127,0,27	1/1:11,3:15:11.87:112,12,0	0/0:17,0:17:3.01:0,3,42	1/1:11,4:16:14.87:144,15,0	1/1:25,5:30:9.02:98,9,0	1/1:13,0:14:2.84:14,3,0	1/1:18,8:25:14.87:144,15,0	1/1:16,14:29:24.05:253,24,0	0/1:13,6:19:12.32:186,0,12	1/1:30,13:45:35.59:333,36,0	1/1:25,13:38:29.78:307,30,0	1/1:15,7:23:35.68:328,36,0	0/1:13,3:16:2.96:142,0,3	0/0:22,0:21:10.27:0,10,118	0/1:25,1:26:5.66:6,0,235	0/0:27,0:27:11.97:0,12,122	1/1:10,8:18:14.60:163,15,0	1/1:9,5:13:11.87:112,12,0	1/1:23,6:29:23.88:234,24,0	1/1:17,6:23:9.02:98,9,0	1/1:17,1:22:14.54:107,15,0	1/1:16,3:19:6.01:65,6,0	1/1:10,0:9:3.01:32,3,0
chr10	16018610	.	A	ATG	4167.22	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-11.241;DP=773;FS=4.575;HRun=0;HaplotypeScore=122.8791;InbreedingCoeff=0.8687;MQ=55.93;MQ0=16;MQRankSum=4.880;QD=22.40;ReadPosRankSum=3.184;VQSLOD=3.8833;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,30:37:48.16:787,48,0	0/0:3,0:11:25.37:0,25,154	0/0:27,0:7:1.65:0,2,66	0/0:30,0:8:5.67:0,6,107	0/0:4,0:25:31.53:0,32,166	0/0:20,0:20:48.09:0,48,564	0/0:27,0:27:72.17:0,72,861	0/0:37,0:37:66.03:0,66,717	0/0:27,0:27:68.75:0,69,786	0/0:17,0:31:67.02:0,67,351	0/0:2,0:10:8.53:0,9,43	1/1:3,20:24:36.12:590,36,0	0/0:27,0:27:69.20:0,69,842	0/0:35,0:37:87.04:0,87,1019	1/1:4,27:31:47.98:787,48,0	1/1:3,25:28:42.14:673,42,0	0/0:9,0:29:60.50:0,60,333	1/1:12,21:33:48.50:731,48,0	0/0:27,0:21:35.71:0,36,385	0/0:24,0:24:63.17:0,63,754	0/0:55,0:56:99:0,141,1685	0/0:21,0:20:45.14:0,45,555	0/0:22,0:22:48.12:0,48,577	0/0:36,0:37:84.08:0,84,1001	1/1:7,23:30:3.13:599,3,0	0/0:18,0:38:71.50:0,71,377	0/0:0,0:19:29.29:0,29,142	0/0:1,0:5:5.75:0,6,30
chr10	16018621	.	TGTGC	T	5504.59	PASS	AB=1.000;AC=18;AF=0.321;AN=56;BaseQRankSum=10.993;DP=762;FS=0.000;HRun=0;HaplotypeScore=143.8003;InbreedingCoeff=0.8502;MQ=55.63;MQ0=17;MQRankSum=-2.003;QD=24.36;ReadPosRankSum=0.299;VQSLOD=4.6516;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:37:63.20:0,63,1200	1/1:11,0:11:32.79:477,33,0	0/1:29,0:7:20.19:20,0,140	0/1:29,0:7:0.92:1,0,292	1/1:24,0:24:38.96:655,39,0	0/0:18,0:18:54.17:0,54,1395	0/0:29,0:29:87.27:0,87,2130	0/0:32,0:32:96.11:0,96,1967	0/0:26,0:26:78.11:0,78,1816	1/1:30,0:30:73.88:1018,74,0	1/1:10,0:10:11.97:177,12,0	0/0:25,0:25:48.05:0,48,815	0/0:26,0:26:75.24:0,75,1957	0/0:37,0:37:99:0,108,2464	0/0:30,0:30:54.03:0,54,1016	0/0:27,0:27:42.14:0,42,836	1/1:33,0:33:67.05:1110,67,0	0/0:32,0:32:7.90:0,8,952	0/0:25,0:19:31.25:0,31,1002	0/0:27,0:27:79.99:0,80,1751	0/0:57,0:57:99:0,165,3823	0/0:19,0:18:54.15:0,54,1322	0/0:21,0:21:54.17:0,54,1317	0/0:39,0:39:98.01:0,98,2360	0/0:27,0:26:48.04:0,48,907	1/1:25,8:33:73.38:1148,73,0	1/1:22,0:22:50.82:758,51,0	1/1:5,0:5:11.85:140,12,0
chr10	16018627	.	CGT	C	4018.34	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=14.347;DP=756;FS=2.730;HRun=0;HaplotypeScore=121.9469;InbreedingCoeff=0.9735;MQ=55.73;MQ0=17;MQRankSum=-1.964;QD=23.78;ReadPosRankSum=0.723;VQSLOD=4.1859;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:36:66.21:0,66,1032	1/1:3,8:11:27.08:324,27,0	0/0:26,1:7:7.57:0,8,74	0/0:29,0:6:12.02:0,12,156	1/1:10,14:24:45.12:530,45,0	0/0:19,0:19:51.17:0,51,844	0/0:29,0:29:78.07:0,78,1206	0/0:27,0:27:69.22:0,69,1087	0/0:24,0:24:62.87:0,63,970	1/1:6,21:27:63.02:690,63,0	1/1:6,5:11:15:166,15,0	0/0:29,0:29:60.18:0,60,898	0/0:25,0:25:69.22:0,69,1113	0/0:37,1:38:65.62:0,66,1503	0/0:28,0:28:57.18:0,57,918	0/0:24,0:24:45.15:0,45,724	1/1:5,30:35:66.58:780,67,0	0/0:30,0:30:61.43:0,61,926	0/0:29,0:23:62.75:0,63,808	0/0:25,0:25:72.14:0,72,1097	0/0:56,1:57:99:0,114,2294	0/0:19,0:18:51.17:0,51,859	0/0:22,0:22:48.11:0,48,695	0/0:37,0:37:96.04:0,96,1517	0/0:29,0:28:51.15:0,51,797	1/1:11,20:31:66.09:716,66,0	1/1:10,14:24:57.15:672,57,0	1/1:2,4:6:11.67:140,12,0
chr10	16023307	.	TA	T	4653.72	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=13.358;DP=565;FS=10.620;HRun=8;HaplotypeScore=54.4547;InbreedingCoeff=0.9687;MQ=74.16;MQ0=0;MQRankSum=-0.228;QD=27.54;ReadPosRankSum=2.121;VQSLOD=5.0465;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:93.23:0,93,1095	1/1:0,4:4:12.02:116,12,0	0/0:15,0:15:21.01:0,21,232	0/0:4,0:5:8.39:0,8,81	1/1:0,24:24:72.12:695,72,0	0/0:21,0:21:60.18:0,60,725	0/0:12,0:12:36.10:0,36,424	0/0:39,0:39:99:0,99,1165	0/0:10,0:10:30.09:0,30,362	1/1:1,21:22:63.09:604,63,0	1/1:0,24:24:72.12:695,72,0	0/0:21,0:21:60.18:0,60,724	0/0:20,0:20:54.16:0,54,640	0/0:21,0:21:63.18:0,63,743	0/0:28,0:28:84.25:0,84,1003	0/0:19,0:19:54.15:0,54,639	1/1:2,23:25:66.11:637,66,0	0/0:18,0:18:42.13:0,42,506	0/0:23,0:23:60.18:0,60,725	0/0:22,0:22:60.18:0,60,725	0/0:21,0:21:63.15:0,63,744	0/0:11,1:12:7.13:0,7,370	0/0:17,0:17:45.12:0,45,524	0/0:11,0:11:27.06:0,27,304	0/0:30,0:30:78.22:0,78,928	1/1:2,25:27:75.10:718,75,0	1/1:1,33:34:96.15:927,96,0	1/1:0,9:9:27.04:261,27,0
chr10	16026897	.	T	TA	3704.66	PASS	AB=1.000;AC=18;AF=0.321;AN=56;BaseQRankSum=-9.964;DP=487;FS=4.295;HRun=9;HaplotypeScore=47.8667;InbreedingCoeff=0.8534;MQ=76.04;MQ0=1;MQRankSum=-1.827;QD=22.45;ReadPosRankSum=0.444;VQSLOD=4.2851;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:65.92:0,66,560	1/1:3,9:12:24.06:265,24,0	0/0:19,0:17:23.88:0,24,196	0/1:10,0:10:5.78:6,0,66	1/1:4,17:21:19.07:438,19,0	0/0:20,1:21:56.98:0,57,495	0/0:12,0:12:32.98:0,33,282	0/0:46,1:47:98.79:0,99,1087	0/0:15,0:15:41.99:0,42,365	1/1:3,17:20:28.05:518,28,0	1/1:2,12:14:33.09:365,33,0	0/0:16,0:16:44.97:0,45,387	0/0:21,0:21:59.99:0,60,521	0/0:12,0:12:32.99:0,33,286	0/0:24,0:24:56.95:0,57,490	0/0:20,0:20:53.97:0,54,465	1/1:4,18:22:57.15:628,57,0	0/0:25,0:25:62.96:0,63,547	0/0:16,0:16:44.99:0,45,390	0/0:14,0:14:35.99:0,36,312	0/0:11,0:11:23.97:0,24,204	0/0:6,0:6:18:0,18,156	0/1:7,0:7:8.07:8,0,112	0/0:7,0:7:11.99:0,12,104	0/0:12,0:12:32.99:0,33,286	1/1:5,13:18:39.09:422,39,0	1/1:1,30:31:78.21:863,78,0	1/1:3,7:10:18.04:192,18,0
chr10	16032100	.	T	TC	4178.40	PASS	AB=0.995;AC=21;AF=0.375;AN=56;BaseQRankSum=-5.408;DP=617;FS=16.727;HRun=0;HaplotypeScore=76.0915;InbreedingCoeff=0.4534;MQ=71.50;MQ0=3;MQRankSum=-1.392;QD=12.47;ReadPosRankSum=5.790;VQSLOD=3.2654;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,26:33:8.01:678,8,0	0/1:9,0:9:10.45:19,0,10	0/0:27,0:17:7.49:0,7,364	0/1:24,0:20:20.41:20,0,228	0/1:26,0:26:60.26:60,0,71	0/0:24,0:24:63.51:0,64,668	0/0:18,0:18:49.78:0,50,607	0/0:30,0:30:81.55:0,82,939	0/0:13,0:13:30.03:0,30,309	1/1:21,1:22:11.61:110,12,0	0/0:13,0:13:0.43:0,0,13	1/1:3,17:20:30.87:396,31,0	0/0:26,0:26:67.76:0,68,765	0/0:14,0:14:38.87:0,39,427	1/1:2,27:28:49.72:674,50,0	1/1:2,24:27:55.91:699,56,0	0/1:27,0:27:16.24:62,0,16	1/1:2,29:31:66.02:854,66,0	0/0:15,0:15:41.41:0,41,467	0/0:23,0:23:64.01:0,64,742	0/0:17,0:19:54.05:0,54,668	0/0:22,0:22:58:0,58,675	0/0:11,0:11:24.50:0,24,256	0/0:26,0:27:70.59:0,71,851	1/1:1,23:23:25.73:465,26,0	0/1:21,0:21:10.82:78,0,11	0/1:24,0:24:19.84:26,0,20	0/1:17,0:17:3.36:36,0,3
chr10	16033949	.	G	GTGC	12239.53	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-14.171;DP=770;FS=4.197;HRun=0;HaplotypeScore=99.7510;InbreedingCoeff=0.9970;MQ=69.05;MQ0=0;MQRankSum=-3.941;QD=62.45;ReadPosRankSum=1.202;VQSLOD=6.4857;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,163,2909	1/1:1,11:13:30.10:731,30,0	0/0:7,0:7:15.94:0,16,281	0/0:12,0:12:32.98:0,33,489	1/1:1,14:16:33.11:811,33,0	0/0:25,0:24:75.22:0,75,1331	0/0:35,0:35:99:0,105,1911	0/0:32,0:32:93.28:0,93,1641	0/0:29,0:29:87.29:0,87,1592	1/1:0,30:31:87.30:2141,87,0	1/1:1,21:23:57.20:1399,57,0	0/0:29,0:29:87.27:0,87,1523	0/0:31,0:31:93.26:0,93,1594	0/0:31,0:31:93.29:0,93,1672	0/0:31,0:31:93.30:0,93,1669	0/0:31,0:31:93.31:0,93,1702	1/1:0,34:35:90.31:2216,90,0	0/0:37,0:37:99:0,111,2068	0/0:20,0:20:60.18:0,60,1078	0/0:30,0:30:90.29:0,90,1608	0/0:40,0:40:99:0,108,2006	0/0:16,0:16:42.14:0,42,783	0/0:21,0:21:63.19:0,63,1110	0/0:33,0:32:96.33:0,96,1780	0/0:29,0:29:87.29:0,87,1585	1/1:2,33:39:99:2508,111,0	1/1:2,28:31:78.27:1916,78,0	1/1:0,8:8:21.07:517,21,0
chr10	16036653	.	G	GGTGTGTGT	2402.27	PASS	AB=0.890;AC=21;AF=0.420;AN=50;BaseQRankSum=-3.643;DP=503;FS=29.352;HRun=0;HaplotypeScore=153.6394;InbreedingCoeff=0.5858;MQ=57.58;MQ0=8;MQRankSum=-4.302;QD=9.46;ReadPosRankSum=-3.928;VQSLOD=-0.0255;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:36,0:35:2.91:3,0,560	0/0:4,0:5:6.02:0,6,113	./.	./.	0/0:18,0:19:9.45:0,9,113	./.	1/1:16,0:15:6.48:82,6,0	1/1:35,0:34:42.24:1011,42,0	1/1:7,0:6:3.01:71,3,0	0/0:15,0:15:19.74:0,20,370	0/0:21,0:21:7.04:0,7,126	0/0:15,0:15:11.59:0,12,261	1/1:10,0:10:10.58:219,11,0	1/1:10,0:10:12.04:340,12,0	0/0:17,0:18:18.06:0,18,311	0/0:9,0:9:9.03:0,9,183	0/0:26,0:26:32.98:0,33,576	0/1:24,0:23:26.84:27,0,458	1/1:24,0:26:16.03:357,16,0	0/1:12,0:12:0:0,0,0	1/1:15,0:17:2.97:20,3,0	0/1:13,0:18:0:0,0,0	0/1:8,8:16:6.09:32,0,6	1/1:22,0:25:21.03:410,21,0	0/0:20,0:20:11.87:0,12,192	0/0:24,0:25:30.09:0,30,493	0/0:12,0:12:15.03:0,15,249	0/0:11,0:11:9.03:0,9,180
chr10	16036685	.	TGTGTGC	T	1226.58	PASS	AB=1.000;AC=17;AF=0.327;AN=52;BaseQRankSum=6.768;DP=460;FS=4.376;HRun=0;HaplotypeScore=119.4008;InbreedingCoeff=0.2591;MQ=48.78;MQ0=14;MQRankSum=-0.956;QD=5.73;ReadPosRankSum=1.737;VQSLOD=1.8731;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:40:34.25:0,34,264	1/1:5,1:6:6.89:91,7,0	./.	./.	0/1:16,0:15:19.74:32,0,20	0/0:14,0:13:20.36:0,20,202	0/0:18,0:17:29.88:0,30,284	0/0:27,0:26:63.56:0,64,818	0/0:5,0:4:3.85:0,4,22	1/1:22,0:22:6.55:256,7,0	1/1:15,1:16:10.23:95,10,0	0/1:15,0:15:5.18:5,0,146	0/0:8,0:8:3.27:0,3,18	0/0:10,0:10:7.91:0,8,129	0/1:15,0:15:27.55:28,0,136	0/0:13,0:13:14.73:0,15,147	1/1:26,2:28:2.40:369,2,0	0/1:35,0:33:25.02:25,0,156	0/0:19,0:17:26.80:0,27,511	0/0:11,0:11:6.01:0,6,131	0/0:12,0:10:8.06:0,8,92	0/0:15,0:14:6.01:0,6,76	0/1:18,0:18:11.89:12,0,154	0/0:17,0:16:27.02:0,27,507	0/0:28,0:28:14.08:0,14,103	0/1:22,0:21:59.10:181,0,59	0/1:11,0:10:4.62:150,0,5	1/1:10,0:8:19.75:146,20,0
chr10	16036687	.	TGTGC	T	2991.04	PASS	AB=0.996;AC=23;AF=0.442;AN=52;BaseQRankSum=8.566;DP=458;FS=0.000;HRun=0;HaplotypeScore=93.1708;InbreedingCoeff=0.4026;MQ=51.60;MQ0=14;MQRankSum=1.642;QD=10.21;ReadPosRankSum=5.422;VQSLOD=2.4216;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:42,0:41:3.37:239,0,3	1/1:5,1:6:9.46:100,9,0	./.	./.	1/1:13,3:15:11.96:124,12,0	0/0:13,0:12:17.35:0,17,131	0/0:17,0:16:23.86:0,24,183	0/0:30,0:28:67.10:0,67,514	0/0:5,0:4:3.44:0,3,21	1/1:17,5:22:45.52:480,46,0	1/1:9,6:15:16.70:188,17,0	0/1:14,0:14:37.02:48,0,37	0/0:8,0:8:2.86:0,3,17	0/0:10,0:10:7.89:0,8,73	0/1:15,0:15:31.90:92,0,32	0/1:13,0:13:33.93:74,0,34	1/1:22,6:28:54.30:666,54,0	0/1:34,0:33:0.22:198,0,0	0/0:17,0:15:23.72:0,24,337	0/0:13,0:13:12:0,12,157	0/0:13,0:11:10.95:0,11,69	0/0:14,0:13:6:0,6,51	0/1:18,0:18:11.90:12,0,102	0/0:17,0:16:26.94:0,27,318	0/1:28,0:28:5.96:88,0,6	1/1:15,6:20:39.33:439,39,0	1/1:6,4:9:0.63:205,1,0	1/1:8,2:8:19.76:219,20,0
chr10	16036689	.	TGCGC	T	2653.39	PASS	AB=0.771;AC=26;AF=0.500;AN=52;BaseQRankSum=7.291;DP=444;FS=4.981;HRun=0;HaplotypeScore=92.4621;InbreedingCoeff=0.6714;MQ=51.91;MQ0=13;MQRankSum=-0.408;QD=9.98;ReadPosRankSum=4.773;VQSLOD=2.2315;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,35:39:27.09:468,27,0	1/1:6,0:6:5.30:57,5,0	./.	./.	1/1:13,0:13:6.02:69,6,0	0/0:13,0:12:15.04:0,15,223	0/0:14,0:13:21.06:0,21,285	0/0:31,0:29:39.04:0,39,516	0/0:5,0:4:3.01:0,3,39	1/1:22,0:22:40.22:271,40,0	1/1:14,0:14:9.89:108,10,0	1/1:4,9:13:6.02:109,6,0	0/0:8,0:8:2.71:0,3,29	0/0:10,0:10:4.28:0,4,57	1/1:4,11:15:9.03:144,9,0	0/1:2,11:13:37.92:152,0,38	1/1:28,0:28:40.50:381,41,0	1/1:9,26:33:24.05:388,24,0	0/0:18,0:16:35.50:0,35,522	0/0:13,0:13:15.05:0,15,278	0/0:11,0:10:6.01:0,6,66	0/0:13,0:12:3.01:0,3,50	0/0:19,0:19:7.56:0,8,152	0/0:16,0:15:15.04:0,15,258	1/1:3,24:27:9.03:163,9,0	1/1:19,0:18:33.58:260,34,0	0/1:10,0:9:0.95:130,0,1	1/1:10,0:8:16.42:141,16,0
chr10	16036700	.	ACG	A	1690.07	PASS	AB=1.000;AC=17;AF=0.315;AN=54;BaseQRankSum=6.512;DP=396;FS=6.824;HRun=0;HaplotypeScore=79.5037;InbreedingCoeff=0.7944;MQ=60.24;MQ0=10;MQRankSum=-2.938;QD=12.90;ReadPosRankSum=0.131;VQSLOD=2.8296;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:35:6.53:0,7,84	1/1:2,5:7:11.95:104,12,0	./.	0/1:5,0:4:0.40:0,0,0	1/1:5,9:13:3.01:32,3,0	0/0:10,0:9:18.06:0,18,283	0/0:12,0:10:21.07:0,21,329	0/0:15,0:14:14.73:0,15,150	0/0:4,0:3:3.01:0,3,49	1/1:3,22:25:57.90:532,58,0	1/1:4,10:14:11.97:107,12,0	0/0:10,0:10:5.19:0,5,20	0/0:5,0:5:6.02:0,6,92	0/0:9,0:9:7.78:0,8,135	0/0:13,0:13:8.79:0,9,76	0/0:13,0:13:14.70:0,15,140	1/1:18,7:25:43.75:402,44,0	0/0:31,0:30:25.05:0,25,162	0/0:19,0:18:39.12:0,39,593	0/0:8,0:8:14.79:0,15,245	0/0:8,0:7:6.02:0,6,96	0/0:15,0:14:21.07:0,21,325	0/0:13,0:13:18.03:0,18,255	0/0:13,0:12:20.63:0,21,324	0/0:25,1:26:9.96:0,10,73	1/1:9,11:19:31.25:300,31,0	1/1:7,4:10:25.38:218,25,0	1/1:8,2:8:18.01:182,18,0
chr10	16037070	.	T	TA	2257.02	PASS	AB=0.837;AC=17;AF=0.304;AN=56;BaseQRankSum=-4.513;DP=618;FS=12.731;HRun=13;HaplotypeScore=73.3035;InbreedingCoeff=0.6871;MQ=64.66;MQ0=1;MQRankSum=-1.123;QD=10.21;ReadPosRankSum=-2.724;VQSLOD=0.9076;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:25:23.35:0,23,270	1/1:3,8:11:0.27:146,0,0	0/0:16,0:12:13.57:0,14,72	0/0:12,0:11:4.93:0,5,18	0/1:8,17:27:2.91:308,0,3	0/0:30,0:35:66.50:0,67,418	0/0:11,0:11:20.74:0,21,142	0/0:34,3:37:31.53:0,32,361	0/0:17,0:17:5.90:0,6,161	1/1:8,10:18:22.26:196,22,0	1/1:5,17:22:24.26:333,24,0	0/0:17,4:22:12.86:0,13,225	0/0:16,3:19:7.77:0,8,196	0/0:17,0:19:21.45:0,21,263	0/0:33,1:35:42.54:0,43,430	0/1:17,0:20:0.65:1,0,172	1/1:12,13:26:55.11:480,55,0	0/0:19,1:21:18.78:0,19,266	0/0:10,0:12:24.83:0,25,153	0/0:30,0:30:38.43:0,38,264	0/0:17,1:18:4.80:0,5,178	0/0:21,1:23:9.81:0,10,204	0/1:23,0:24:22.47:22,0,200	0/0:21,0:23:26.14:0,26,274	0/0:22,0:22:40.64:0,41,273	1/1:15,10:28:23.93:319,24,0	1/1:6,22:30:29.47:429,29,0	1/1:2,12:15:23.86:209,24,0
chr10	16038869	.	AT	A	3911.77	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=12.730;DP=753;FS=9.099;HRun=10;HaplotypeScore=73.3325;InbreedingCoeff=0.9433;MQ=74.36;MQ0=0;MQRankSum=-1.246;QD=20.70;ReadPosRankSum=3.500;VQSLOD=4.4288;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,45:46:99:989,114,0	0/0:16,0:16:45.12:0,45,498	0/0:17,2:18:1.97:0,2,255	0/0:12,0:14:19.55:0,20,197	0/0:21,1:23:30.93:0,31,552	0/0:29,0:29:84.23:0,84,929	0/0:21,2:24:19.90:0,20,650	0/0:43,0:44:99:0,111,1193	0/0:21,0:21:60.15:0,60,656	0/0:27,0:27:72.17:0,72,777	0/0:13,1:15:12.88:0,13,353	1/1:4,25:30:71.02:605,71,0	0/0:27,1:28:52.15:0,52,791	0/0:28,0:28:72.19:0,72,797	1/1:6,31:37:89.98:781,90,0	1/1:3,24:28:40.84:572,41,0	0/0:19,0:19:54.07:0,54,575	1/1:1,20:21:57.87:496,58,0	0/0:25,1:27:33.91:0,34,573	0/0:31,0:31:81.20:0,81,877	0/0:21,1:23:33.94:0,34,586	0/0:26,0:27:68.95:0,69,729	0/0:33,0:33:90.24:0,90,995	0/0:29,0:29:68.96:0,69,733	1/1:5,21:27:28.83:468,29,0	0/0:41,0:41:96.26:0,96,1062	0/0:32,0:32:87.22:0,87,951	0/0:13,1:14:10.04:0,10,339
chr10	16040804	.	C	CATGTATGT	14112.92	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=6.262;DP=847;FS=2.223;HRun=0;HaplotypeScore=225.7295;InbreedingCoeff=0.9727;MQ=64.95;MQ0=5;MQRankSum=-7.548;QD=31.93;ReadPosRankSum=0.869;VQSLOD=4.7008;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:47:56.95:477,57,0	1/1:5,12:19:18.06:678,18,0	0/0:25,0:19:17.88:0,18,191	0/0:21,0:16:24.96:0,25,468	1/1:2,22:31:27.08:870,27,0	0/0:25,0:25:63.18:0,63,1501	0/0:28,0:28:60.09:0,60,1164	0/0:27,0:27:62.92:0,63,932	0/0:25,0:25:57.12:0,57,1243	1/1:10,34:47:95.97:2909,96,0	1/1:4,22:27:15.05:583,15,0	1/1:14,0:32:73.29:625,73,0	0/0:45,0:45:99:0,120,2481	0/0:26,0:26:75.11:0,75,1504	1/1:9,0:45:77.71:635,78,0	1/1:20,0:39:80.87:654,81,0	1/1:8,12:20:9.03:351,9,0	1/1:6,0:19:23.97:199,24,0	0/0:21,0:21:45.03:0,45,738	0/0:42,0:42:99:0,114,2328	0/0:44,0:44:81.02:0,81,1703	0/0:25,0:25:57.08:0,57,1175	0/0:29,0:29:69.15:0,69,1510	0/0:22,0:22:51.08:0,51,1002	1/1:1,0:33:74.91:622,75,0	1/1:7,28:38:99:3101,99,0	1/1:19,13:32:66.21:2181,66,0	1/1:4,5:9:6.02:231,6,0
chr10	16040876	.	C	CGATA	7592.74	PASS	AB=0.827;AC=48;AF=0.923;AN=52;BaseQRankSum=-0.194;DP=824;FS=0.000;HRun=0;HaplotypeScore=238.0512;InbreedingCoeff=-0.1218;MQ=54.28;MQ0=1;MQRankSum=-0.376;QD=9.78;ReadPosRankSum=-1.430;VQSLOD=3.7627;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:32,1:40:20.51:190,21,0	1/1:7,0:10:8.02:53,8,0	./.	./.	1/1:32,0:41:18.26:206,18,0	1/1:11,17:27:30.10:693,30,0	1/1:12,9:22:12.04:279,12,0	1/1:39,0:39:5.46:26,5,0	1/1:14,8:22:15.05:349,15,0	0/1:33,3:36:42.68:454,0,43	1/1:27,0:30:1.16:64,1,0	1/1:23,1:35:17.86:95,18,0	0/1:32,13:46:6.87:762,0,7	0/1:20,10:30:21.78:464,0,22	1/1:31,1:43:23.74:210,24,0	1/1:29,2:44:18.20:140,18,0	1/1:12,0:13:6.02:98,6,0	1/1:14,6:20:30.10:686,30,0	0/1:22,2:26:24.79:346,0,25	1/1:34,0:43:14.16:125,14,0	1/1:14,0:14:3:25,3,0	1/1:16,8:25:6.02:140,6,0	1/1:16,8:25:18.06:419,18,0	1/1:13,13:26:24.08:559,24,0	1/1:33,1:40:16.63:186,17,0	1/1:28,1:31:18.53:340,19,0	1/1:29,1:42:39.73:543,40,0	1/1:5,0:5:8.82:140,9,0
chr10	16041802	.	TTCTCTC	T	6884.06	PASS	AB=0.773;AC=46;AF=0.852;AN=54;BaseQRankSum=3.543;DP=583;FS=20.967;HRun=0;HaplotypeScore=179.2326;InbreedingCoeff=-0.0681;MQ=53.34;MQ0=10;MQRankSum=-5.895;QD=12.56;ReadPosRankSum=-3.671;VQSLOD=2.2409;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,0:21:2.99:23,3,0	1/1:6,0:10:3.01:42,3,0	0/0:17,0:11:0:0,0,0	./.	1/1:13,0:19:7.06:116,7,0	1/1:9,12:21:30.10:569,30,0	0/1:14,4:18:4.96:94,0,5	1/1:43,0:43:17.65:158,18,0	1/1:4,8:13:10.39:400,10,0	0/1:19,0:35:27:125,0,27	1/1:9,0:13:9.03:126,9,0	1/1:6,0:15:24.02:298,24,0	1/1:11,16:29:20.59:416,21,0	1/1:4,11:15:18.06:338,18,0	1/1:11,0:27:51.16:677,51,0	1/1:7,0:22:21.07:293,21,0	1/1:14,0:27:15.52:208,16,0	1/1:11,0:12:9:104,9,0	1/1:18,7:22:10.81:365,11,0	0/1:12,6:17:2.99:62,0,3	0/1:21,0:21:8.70:192,0,9	1/1:14,6:20:23.09:321,23,0	0/1:9,7:16:42.54:289,0,43	0/1:13,11:24:25.91:52,0,26	1/1:12,0:30:35.45:597,35,0	1/1:16,0:26:7.85:390,8,0	1/1:3,0:16:18.13:465,18,0	1/1:1,0:7:12.04:162,12,0
chr10	16042065	.	GTGTGTGTGTA	G	2223.69	PASS	AB=0.708;AC=5;AF=0.089;AN=56;BaseQRankSum=9.720;DP=1259;FS=4.704;HRun=0;HaplotypeScore=325.8662;InbreedingCoeff=0.3735;MQ=54.76;MQ0=35;MQRankSum=-4.918;QD=9.84;ReadPosRankSum=-4.818;VQSLOD=1.1684;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:73,0:72:99:0,118,5219	0/0:16,0:16:33.11:0,33,1587	0/0:84,0:27:21.07:0,21,593	0/0:100,0:21:12.04:0,12,301	0/0:26,0:26:39.13:0,39,1393	0/0:21,0:19:45.15:0,45,2036	0/0:39,0:39:65.98:0,66,2961	0/1:38,15:49:41.35:840,0,41	0/0:45,0:45:99:0,114,5055	0/0:40,0:39:93.28:0,93,3952	0/0:30,0:29:69.24:0,69,3312	0/0:56,0:54:99:0,99,4065	0/0:53,0:53:99:0,111,4984	0/0:35,0:35:69.24:0,69,3156	0/0:65,0:65:99:0,126,5627	0/0:61,0:61:99:0,132,6072	0/0:36,0:35:66.21:0,66,2842	0/0:24,0:24:39.13:0,39,1719	0/1:15,10:18:8.69:735,0,9	1/1:12,27:38:38.74:526,39,0	0/1:45,64:105:59.82:246,0,60	0/0:32,0:32:66.23:0,66,2775	0/0:29,0:29:51.17:0,51,2020	0/0:46,0:46:84.27:0,84,3631	0/0:28,0:28:60.21:0,60,2671	0/0:54,0:50:81.90:0,82,5000	0/0:24,0:23:48.15:0,48,2096	0/0:16,0:16:42.14:0,42,1813
chr10	16042149	.	ATG	A	12219.19	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=16.019;DP=1173;FS=3.779;HRun=0;HaplotypeScore=196.0801;InbreedingCoeff=0.8736;MQ=57.23;MQ0=19;MQRankSum=5.248;QD=20.37;ReadPosRankSum=4.242;VQSLOD=5.0090;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,37:56:79.47:1010,79,0	1/1:2,10:12:18.05:225,18,0	0/1:63,0:18:4.65:5,0,234	0/0:60,1:19:3.76:0,4,463	1/1:7,15:22:27.09:338,27,0	0/0:29,0:29:78.25:0,78,1246	0/0:46,1:47:79.83:0,80,1746	0/0:39,0:37:80.41:0,80,1276	0/0:43,0:43:99:0,111,1715	1/1:7,34:41:99:1255,101,0	1/1:3,15:18:21.07:263,21,0	1/1:5,55:59:99:1463,117,0	0/0:53,1:54:98.58:0,99,2241	0/0:34,0:34:93.31:0,93,1498	1/1:10,47:58:99:1364,111,0	1/1:17,56:71:62.30:1540,62,0	1/1:8,38:46:98.33:1205,98,0	1/1:15,25:40:34.94:721,35,0	0/0:25,0:22:42.12:0,42,645	0/0:25,1:25:4.62:0,5,602	0/0:115,0:114:99:0,229,3643	0/0:35,0:35:63.22:0,63,1028	0/0:25,1:26:22.41:0,22,887	0/0:38,0:39:2.19:0,2,1261	1/1:4,26:30:65.93:825,66,0	1/1:10,29:38:71.72:1068,72,0	1/1:5,27:32:63.01:788,63,0	1/1:3,6:9:12.04:150,12,0
chr10	16050238	.	ATGTATG	A	2610.51	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=8.920;DP=755;FS=1.503;HRun=0;HaplotypeScore=167.6378;InbreedingCoeff=0.9861;MQ=54.64;MQ0=4;MQRankSum=-5.436;QD=21.22;ReadPosRankSum=-0.238;VQSLOD=3.4681;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:81.23:0,81,2292	1/1:7,1:8:23.94:271,24,0	0/0:41,0:30:75.15:0,75,1892	0/0:19,0:13:24.08:0,24,716	1/1:12,8:20:41.84:447,42,0	0/0:28,0:28:72.25:0,72,2326	0/0:26,0:26:69.21:0,69,1968	0/0:55,0:55:99:0,132,3751	0/0:35,0:35:90.31:0,90,2783	1/1:16,3:18:24.08:469,24,0	1/1:3,14:17:20.86:170,21,0	0/0:31,0:31:81.28:0,81,2620	0/0:28,0:28:72.23:0,72,2149	0/0:36,0:36:81.28:0,81,2643	0/0:36,0:36:90.31:0,90,2923	0/0:27,0:27:69.24:0,69,2087	1/1:14,1:15:17.90:175,18,0	0/0:35,0:35:87.14:0,87,2458	0/0:15,0:14:21.07:0,21,707	0/0:35,0:35:96.31:0,96,3022	0/0:28,0:28:69.18:0,69,2075	0/0:39,0:39:99:0,105,3263	0/0:25,0:25:69.24:0,69,2203	0/0:28,0:27:57:0,57,1579	0/0:28,0:28:72.23:0,72,2221	1/1:20,4:24:45.09:728,45,0	1/1:11,2:13:27:414,27,0	1/1:7,0:7:8.99:142,9,0
chr10	16052276	.	CCACACA	C	512.93	PASS	AB=0.769;AC=6;AF=0.111;AN=54;BaseQRankSum=-0.434;DP=705;FS=11.002;HRun=0;HaplotypeScore=161.3887;InbreedingCoeff=0.2119;MQ=62.20;MQ0=27;MQRankSum=-0.927;QD=3.13;ReadPosRankSum=1.705;VQSLOD=1.5647;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:25,21:46:12.35:53,0,12	0/0:11,0:11:5.93:0,6,44	./.	0/0:32,0:22:6:0,6,62	0/0:16,0:16:9.01:0,9,217	0/0:22,0:23:21.07:0,21,519	0/0:28,0:32:19.40:0,19,412	0/0:28,0:26:18.19:0,18,139	0/0:19,0:21:24.04:0,24,460	0/0:29,0:29:39.11:0,39,889	0/0:20,0:19:2.80:0,3,13	0/1:12,13:25:0:0,0,0	0/0:18,0:23:17.94:0,18,316	0/0:8,0:21:12.04:0,12,280	0/0:20,12:32:3:0,3,25	1/1:17,18:36:20.86:408,21,0	0/0:36,0:36:48.08:0,48,999	0/1:28,0:23:21.09:141,0,21	0/0:11,0:10:12.03:0,12,178	0/0:14,0:26:15.05:0,15,261	0/0:25,0:28:11.96:0,12,200	0/0:14,0:18:8.85:0,9,87	0/0:9,0:14:3.01:0,3,48	0/0:15,0:26:2.99:0,3,23	0/1:17,8:26:25.39:30,0,25	0/0:24,0:25:35.99:0,36,804	0/0:10,0:10:7.57:0,8,145	0/0:16,0:15:27.04:0,27,673
chr10	16052319	.	T	TAC	1874.16	PASS	AB=0.787;AC=14;AF=0.259;AN=54;BaseQRankSum=1.504;DP=752;FS=44.685;HRun=0;HaplotypeScore=134.1972;InbreedingCoeff=0.4518;MQ=49.29;MQ0=44;MQRankSum=1.164;QD=9.23;ReadPosRankSum=2.774;VQSLOD=1.4594;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:45:47.95:0,48,561	1/1:1,9:10:0.44:1,0,0	0/0:23,0:1:3:0,3,26	0/0:23,0:2:6.02:0,6,79	0/1:3,17:20:13.94:46,0,14	0/1:22,0:21:50.18:50,0,291	0/0:31,0:30:8.03:0,8,355	0/0:30,0:23:36.28:0,36,373	0/0:33,0:33:3.49:0,3,615	1/1:10,21:30:57.94:699,58,0	./.	0/0:32,0:31:39.11:0,39,491	0/0:16,0:15:10.20:0,10,295	0/0:29,0:28:43.57:0,44,537	0/0:36,0:36:52.98:0,53,632	0/0:36,0:35:62.17:0,62,704	0/1:14,25:39:23.67:110,0,24	0/0:29,0:26:29.38:0,29,537	0/0:19,0:19:6.70:0,7,354	0/1:20,0:20:5.94:6,0,180	0/0:51,0:47:62.04:0,62,843	0/0:24,0:23:41.72:0,42,521	0/0:18,0:16:21.07:0,21,276	0/0:27,0:25:39.10:0,39,479	0/0:24,0:23:30.10:0,30,393	1/1:6,27:33:52.83:763,53,0	1/1:3,11:14:6.69:67,7,0	1/1:12,0:10:8.16:291,8,0
chr10	16052419	.	TACAC	T	5660.20	PASS	AB=0.833;AC=32;AF=0.615;AN=52;BaseQRankSum=-9.438;DP=665;FS=11.608;HRun=0;HaplotypeScore=117.2046;InbreedingCoeff=0.6869;MQ=49.73;MQ0=26;MQRankSum=2.997;QD=15.13;ReadPosRankSum=0.431;VQSLOD=3.6088;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:33:30.56:0,31,480	1/1:5,0:5:6.02:93,6,0	./.	0/0:44,0:23:18.46:0,18,233	0/0:4,9:13:0:0,0,0	1/1:10,0:24:7.43:82,7,0	1/1:28,0:27:35.85:467,36,0	1/1:19,9:26:11.18:284,11,0	1/1:26,0:25:29.51:400,30,0	1/1:23,0:22:17.42:487,17,0	1/1:17,0:18:32.71:505,33,0	0/0:26,0:26:38.47:0,38,521	0/1:17,0:16:10.76:248,0,11	1/1:23,0:23:37.93:540,38,0	0/0:28,0:27:36.11:0,36,566	0/0:33,0:32:42.23:0,42,543	1/1:24,0:22:38.71:520,39,0	0/0:20,0:18:43.47:0,43,546	1/1:15,7:20:15.54:269,16,0	1/1:7,14:20:2.74:36,3,0	1/1:30,0:29:34.71:482,35,0	./.	0/0:9,10:18:0:0,0,0	0/1:17,0:32:17.79:39,0,18	0/0:21,0:20:7.84:0,8,92	1/1:20,0:20:5.91:307,6,0	1/1:20,0:20:41.18:549,41,0	1/1:9,0:9:24.08:351,24,0
chr10	16052443	.	CAGAGAGAGAGAGAGAGAG	C	390.95	PASS	AB=0.876;AC=6;AF=0.115;AN=52;BaseQRankSum=3.787;DP=587;FS=6.732;HRun=0;HaplotypeScore=227.2166;InbreedingCoeff=0.3006;MQ=46.43;MQ0=22;MQRankSum=-2.367;QD=4.20;ReadPosRankSum=2.339;VQSLOD=1.6811;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,10:39:0.89:0,1,3	0/0:9,0:9:4.83:0,5,181	./.	./.	0/0:17,0:17:9.03:0,9,422	0/0:21,0:21:9.25:0,9,295	0/0:30,0:29:16.47:0,16,986	0/0:23,0:20:18.02:0,18,587	0/0:16,0:15:12.14:0,12,370	0/0:25,0:24:54.17:0,54,2210	0/0:18,0:18:15.05:0,15,645	1/1:17,0:19:2.09:81,2,0	0/0:15,0:14:21.07:0,21,1115	0/0:24,0:24:25.33:0,25,1038	1/1:17,4:21:3:28,3,0	0/1:24,4:31:36.87:257,0,37	0/0:25,0:23:35:0,35,1267	0/1:19,1:18:30.42:135,0,30	0/0:21,0:15:19.68:0,20,708	0/0:18,0:17:9.24:0,9,167	0/0:32,0:31:25.02:0,25,1394	0/0:23,0:23:12.04:0,12,661	0/0:19,0:17:6.49:0,6,352	0/0:32,0:30:15.05:0,15,948	0/0:12,6:18:3.01:0,3,34	0/0:23,0:23:57.66:0,58,3364	0/0:19,0:19:20.10:0,20,1190	0/0:13,0:11:9.03:0,9,388
chr10	16053900	.	CATGCT	C	4213.25	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=10.429;DP=797;FS=0.994;HRun=0;HaplotypeScore=147.4278;InbreedingCoeff=0.9989;MQ=86.98;MQ0=0;MQRankSum=-3.872;QD=51.38;ReadPosRankSum=5.348;VQSLOD=5.1958;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:78.25:0,78,2339	0/0:10,0:10:27.09:0,27,872	0/0:23,0:23:66.14:0,66,1627	0/0:33,0:33:75.64:0,76,2411	0/0:33,0:33:93.32:0,93,2977	0/0:15,0:15:45.14:0,45,1330	0/0:32,0:32:90.30:0,90,2777	0/0:35,0:35:99:0,102,2987	0/0:42,1:43:62.52:0,63,3881	0/0:31,0:31:93.32:0,93,2936	0/0:20,0:20:57.20:0,57,1804	0/0:33,0:33:99:0,99,3128	0/0:32,0:32:96.33:0,96,2946	0/0:39,0:39:99:0,117,3583	1/1:0,26:26:69.24:1537,69,0	1/1:3,28:31:60.21:1338,60,0	0/0:22,0:22:66.23:0,66,2080	1/1:0,25:25:60.21:1338,60,0	0/0:26,0:26:78.22:0,78,2213	0/0:23,0:23:69.05:0,69,2025	0/0:57,0:57:99:0,169,5253	0/0:34,0:34:99:0,102,3070	0/0:22,0:22:66.20:0,66,2057	0/0:36,0:36:99:0,108,3358	0/0:23,0:23:66.23:0,66,2133	0/0:27,0:27:81.28:0,81,2524	0/0:30,0:30:90.31:0,90,2904	0/0:10,0:10:24.08:0,24,775
chr10	16054981	.	T	TC	6965.69	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-11.719;DP=674;FS=1.473;HRun=8;HaplotypeScore=72.1465;InbreedingCoeff=0.9940;MQ=88.70;MQ0=0;MQRankSum=-0.042;QD=22.91;ReadPosRankSum=4.944;VQSLOD=5.2562;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,39:41:84.25:967,84,0	1/1:2,5:7:15.04:173,15,0	0/0:28,0:27:53:0,53,464	0/0:30,0:29:41.46:0,41,346	1/1:4,14:18:30.09:346,30,0	0/0:11,0:11:27.01:0,27,247	0/0:19,0:19:48.02:0,48,439	0/0:31,0:31:56.99:0,57,518	0/0:33,0:33:90.03:0,90,823	1/1:5,14:19:36.11:416,36,0	1/1:2,8:10:15.04:173,15,0	1/1:4,30:34:72.21:831,72,0	0/0:23,0:23:56.99:0,57,509	0/0:39,0:39:92.99:0,93,841	1/1:4,22:26:23.74:527,24,0	1/1:5,21:25:32.73:631,33,0	1/1:3,23:27:57:632,57,0	1/1:3,13:16:30.09:346,30,0	0/0:20,0:20:47.97:0,48,432	0/0:11,0:11:27.01:0,27,247	0/0:51,0:51:99:0,130,1176	0/0:12,0:12:24:0,24,220	0/0:18,0:18:45:0,45,407	0/0:44,0:44:99:0,99,905	1/1:1,21:21:51.15:589,51,0	1/1:5,17:21:42.10:471,42,0	1/1:6,20:26:54.16:622,54,0	1/1:0,10:10:21.06:242,21,0
chr10	16057828	.	CAGAGAGAGAGAGAGAG	C	1277.79	PASS	AC=12;AF=0.286;AN=42;BaseQRankSum=4.689;DP=521;FS=9.858;HRun=0;HaplotypeScore=171.9066;InbreedingCoeff=0.5656;MQ=43.45;MQ0=28;MQRankSum=-4.355;QD=10.65;ReadPosRankSum=-0.811;VQSLOD=1.7692;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:28:21.07:0,21,881	0/0:11,0:11:0.89:0,1,2	./.	./.	./.	0/0:16,4:19:2.97:0,3,21	0/0:17,0:19:0.47:0,0,1	0/0:25,0:22:0:0,0,0	1/1:15,10:26:9.91:346,10,0	./.	./.	0/0:19,0:19:23.79:0,24,985	1/1:15,0:15:2.81:119,3,0	1/1:22,1:21:3.01:117,3,0	0/0:26,0:26:22:0,22,852	0/0:26,0:26:15.51:0,16,615	1/1:14,0:18:5.96:140,6,0	0/0:20,0:20:23.65:0,24,1117	1/1:17,3:19:8.67:307,9,0	0/0:16,2:16:0:0,0,0	./.	0/0:18,0:17:3.48:0,3,67	./.	0/0:26,2:24:2.96:0,3,19	0/0:15,0:15:6.02:0,6,175	0/0:22,0:21:2.22:0,2,7	1/1:13,0:13:10.90:377,11,0	0/0:7,0:5:0.47:0,0,2
chr10	16059385	.	C	CATCTCCCCTTCAGAACCCCGCTGCC	36863.76	PASS	AB=0.635;AC=54;AF=0.964;AN=56;BaseQRankSum=-0.791;DP=229;FS=22.330;HRun=0;HaplotypeScore=241.5572;InbreedingCoeff=-0.0490;MQ=62.28;MQ0=0;MQRankSum=-2.360;QD=160.98;ReadPosRankSum=1.910;VQSLOD=3.2262;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:15:30.10:1814,30,0	1/1:3,0:3:9.03:725,9,0	0/1:1,0:5:10.58:377,0,11	0/1:3,1:5:14.46:797,0,14	1/1:5,0:5:15.05:632,15,0	1/1:10,0:10:27.09:1854,27,0	1/1:11,0:11:33.11:1844,33,0	1/1:8,0:8:21.07:1243,21,0	1/1:13,0:13:24.07:1801,24,0	1/1:7,0:7:21.07:2063,21,0	1/1:3,0:3:9.03:498,9,0	1/1:9,0:9:21.07:1420,21,0	1/1:11,0:11:30.10:2072,30,0	1/1:10,0:10:25.90:1993,26,0	1/1:11,0:11:24.07:1604,24,0	1/1:10,0:10:23.95:1820,24,0	1/1:11,0:11:24.08:1751,24,0	1/1:5,0:5:6.02:522,6,0	1/1:11,0:11:30.10:1592,30,0	1/1:5,0:5:15.05:1184,15,0	1/1:13,0:13:24.06:1287,24,0	1/1:6,0:6:18.06:1146,18,0	1/1:6,0:6:15.94:921,16,0	1/1:5,0:5:12:318,12,0	1/1:8,0:8:21.07:1286,21,0	1/1:11,0:11:33.11:2095,33,0	1/1:7,0:7:12.04:782,12,0	1/1:5,0:5:15.05:1422,15,0
chr10	16060651	.	T	TTC	3108.06	PASS	AB=0.802;AC=40;AF=0.741;AN=54;BaseQRankSum=-2.459;DP=587;FS=1.103;HRun=0;HaplotypeScore=109.7627;InbreedingCoeff=-0.1189;MQ=71.15;MQ0=7;MQRankSum=-1.572;QD=5.75;ReadPosRankSum=1.094;VQSLOD=3.2623;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:21:3.91:27,4,0	./.	0/0:27,0:22:5.57:0,6,30	0/1:30,0:24:9.97:10,0,28	1/1:28,0:28:3:25,3,0	0/1:11,6:19:99:200,0,107	0/1:17,8:26:49.32:49,0,59	1/1:29,5:33:16.21:155,16,0	0/1:10,3:12:26.27:81,0,26	1/1:23,0:22:19.08:124,19,0	1/1:18,0:18:3:25,3,0	1/1:16,0:16:9:79,9,0	0/1:12,17:29:51.07:414,0,51	0/1:21,3:24:40.50:122,0,40	0/1:17,0:16:1.36:36,0,1	1/1:20,0:20:5.95:44,6,0	1/1:11,0:11:7.73:58,8,0	0/0:10,0:10:3.28:0,3,9	1/1:23,4:28:15.83:194,16,0	1/1:12,10:22:24.46:313,24,0	0/1:26,12:38:87.44:158,0,87	0/1:14,7:21:18.46:167,0,18	0/1:6,3:9:21.47:125,0,21	1/1:12,18:32:10.97:591,11,0	1/1:10,0:10:3:26,3,0	1/1:25,0:25:18.57:133,19,0	1/1:17,0:14:12.18:80,12,0	1/1:8,0:7:2.97:20,3,0
chr10	16061033	.	TG	T	7065.76	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=14.423;DP=706;FS=0.654;HRun=1;HaplotypeScore=69.4616;InbreedingCoeff=0.9996;MQ=64.88;MQ0=1;MQRankSum=-0.884;QD=37.99;ReadPosRankSum=0.988;VQSLOD=5.3612;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:84.25:0,84,1229	1/1:0,9:9:24.08:335,24,0	0/0:26,0:18:51.01:0,51,686	0/0:23,0:21:59.71:0,60,794	1/1:0,32:32:93.15:1213,93,0	0/0:18,0:18:54.18:0,54,808	0/0:25,0:25:68.05:0,68,1014	0/0:45,0:45:99:0,132,1897	0/0:20,0:20:60.20:0,60,898	1/1:0,29:29:87.28:1196,87,0	1/1:0,18:18:48.01:603,48,0	0/0:25,0:25:75.24:0,75,1083	0/0:14,0:14:42.14:0,42,608	0/0:19,0:19:57.17:0,57,820	0/0:20,0:20:60.19:0,60,872	0/0:30,0:30:90.29:0,90,1315	1/1:1,29:30:72.13:977,72,0	0/0:30,0:30:87.17:0,87,1199	0/0:27,0:27:81.24:0,81,1128	0/0:37,0:37:99:0,105,1495	0/0:26,0:26:78.26:0,78,1135	0/0:30,0:30:90.27:0,90,1296	0/0:30,0:30:90.22:0,90,1234	0/0:31,0:31:85.57:0,86,1291	0/0:11,0:11:33.09:0,33,465	1/1:0,23:23:69.21:939,69,0	1/1:0,29:29:84.28:1174,84,0	1/1:0,16:16:45.15:629,45,0
chr10	16062071	.	TTATCCATCCATC	T	6247.69	PASS	AB=1.000;AC=20;AF=0.370;AN=54;BaseQRankSum=13.452;DP=714;FS=2.247;HRun=0;HaplotypeScore=230.0773;InbreedingCoeff=0.5159;MQ=76.25;MQ0=12;MQRankSum=-2.273;QD=20.97;ReadPosRankSum=1.914;VQSLOD=3.7969;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:41,0:41:99:224,0,605	./.	0/0:47,0:36:78.91:0,79,951	0/0:47,0:37:90.18:0,90,916	1/1:0,23:22:38.41:431,38,0	0/0:31,0:31:75.04:0,75,1061	0/0:34,0:34:75.04:0,75,1145	0/0:25,0:23:68.95:0,69,646	0/0:38,0:38:96.06:0,96,1931	1/1:3,22:22:62.99:926,63,0	1/1:0,16:16:20.94:560,21,0	0/1:27,0:27:99:274,0,322	0/0:21,0:21:47.98:0,48,858	0/0:24,0:24:66.07:0,66,1748	0/1:24,0:24:99:527,0,221	0/1:32,0:31:99:664,0,388	1/1:10,0:10:29.89:238,30,0	0/1:10,0:10:67.46:67,0,75	0/0:24,0:21:56.87:0,57,1111	0/0:31,0:27:66.05:0,66,1131	0/0:26,0:24:62.63:0,63,896	0/0:25,0:24:64.71:0,65,1528	0/0:12,0:12:29.59:0,30,467	0/0:24,0:24:51.42:0,51,753	0/1:25,0:24:99:275,0,245	1/1:0,25:24:62.90:944,63,0	1/1:0,21:22:17.64:674,18,0	1/1:1,17:16:12.04:443,12,0
chr10	16062072	.	T	TATCCATCC	2566.80	PASS	AB=1.000;AC=19;AF=0.380;AN=50;BaseQRankSum=-7.460;DP=732;FS=0.000;HRun=0;HaplotypeScore=205.7739;InbreedingCoeff=0.7536;MQ=75.89;MQ0=15;MQRankSum=1.245;QD=9.47;ReadPosRankSum=-4.151;VQSLOD=1.0076;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:41:11.09:0,11,193	0/0:7,0:6:0:0,0,0	./.	./.	0/0:23,0:22:6.02:0,6,111	0/0:18,0:30:21.07:0,21,353	0/0:22,0:34:11.37:0,11,112	0/1:26,0:23:0:0,0,0	1/1:29,9:39:12.04:435,12,0	0/0:25,0:22:12.04:0,12,205	0/0:16,0:16:12:0,12,159	0/0:15,0:27:12.04:0,12,223	1/1:20,0:20:6:131,6,0	1/1:17,6:27:21.07:830,21,0	0/0:11,0:24:20.81:0,21,347	0/0:19,0:30:26.12:0,26,447	./.	0/0:7,0:10:11.78:0,12,155	1/1:22,3:23:15.05:394,15,0	1/1:19,10:31:15.01:327,15,0	1/1:22,3:28:2.66:94,3,0	1/1:19,7:26:5.77:240,6,0	1/1:10,2:15:2.98:120,3,0	1/1:24,0:24:9:169,9,0	0/0:14,0:23:15.05:0,15,274	0/0:25,0:24:10.44:0,10,148	0/0:22,0:22:17.74:0,18,303	0/0:18,0:15:6.07:0,6,37
chr10	16062099	.	C	CCATCCATC	2493.80	PASS	AB=1.000;AC=21;AF=0.420;AN=50;BaseQRankSum=-7.953;DP=718;FS=0.000;HRun=0;HaplotypeScore=188.5418;InbreedingCoeff=0.7557;MQ=52.52;MQ0=41;MQRankSum=-1.138;QD=8.54;ReadPosRankSum=-2.280;VQSLOD=2.2409;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:9.98:0,10,132	0/1:10,0:9:0:0,0,0	./.	./.	0/0:24,0:21:6.02:0,6,111	0/0:27,0:27:21.07:0,21,353	0/0:31,0:31:11.37:0,11,112	1/1:44,0:33:4.52:12,5,0	1/1:35,0:35:12.04:435,12,0	0/0:27,0:23:12.04:0,12,205	0/0:16,0:16:12:0,12,159	0/0:29,0:29:12.04:0,12,223	1/1:14,5:20:6:131,6,0	1/1:24,0:24:21.96:831,22,0	0/0:28,0:28:20.81:0,21,347	0/0:28,0:27:26.12:0,26,447	./.	0/0:14,0:13:5.75:0,6,41	1/1:32,0:19:15.05:394,15,0	1/1:31,0:27:15.01:327,15,0	1/1:30,0:27:5.67:132,6,0	1/1:28,0:26:5.81:240,6,0	1/1:13,0:13:3.01:120,3,0	1/1:25,0:25:6.46:49,6,0	0/0:21,0:20:15.05:0,15,274	0/0:28,0:26:9.97:0,10,147	0/0:27,0:27:17.74:0,18,303	0/0:19,0:16:6.07:0,6,37
chr10	16063993	.	AT	A	2211.69	PASS	AB=0.909;AC=19;AF=0.339;AN=56;BaseQRankSum=9.122;DP=504;FS=1.409;HRun=11;HaplotypeScore=66.3349;InbreedingCoeff=0.8075;MQ=81.83;MQ0=0;MQRankSum=1.269;QD=11.58;ReadPosRankSum=2.266;VQSLOD=3.4301;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,111,1140	1/1:2,7:10:20.97:172,21,0	0/1:15,1:15:6.62:7,0,131	0/0:17,0:15:12.01:0,12,115	1/1:1,17:18:32.23:270,32,0	0/0:13,0:13:36.08:0,36,377	0/0:17,0:17:42.11:0,42,448	0/0:32,0:32:72.18:0,72,768	0/1:10,1:11:0.64:1,0,181	1/1:4,13:18:37.97:301,38,0	1/1:2,15:17:35.94:296,36,0	0/0:14,0:15:39.02:0,39,389	0/0:11,0:11:30.08:0,30,320	0/0:24,0:24:57.12:0,57,595	0/0:17,0:18:44.95:0,45,462	0/0:12,0:12:24.21:0,24,283	1/1:7,8:15:23.96:197,24,0	0/0:16,0:17:41.92:0,42,422	0/0:20,0:20:48.08:0,48,494	0/0:15,0:15:33.08:0,33,352	0/0:17,1:18:20.43:0,20,411	0/0:13,0:13:29.97:0,30,301	0/0:11,0:11:27.07:0,27,288	0/1:17,2:20:11.03:11,0,340	0/0:18,0:18:45.03:0,45,464	1/1:10,17:27:47.89:394,48,0	1/1:1,20:22:52.98:424,53,0	1/1:3,14:17:41.95:344,42,0
chr10	16064033	.	A	AGT	313.14	PASS	AB=1.000;AC=23;AF=0.605;AN=38;BaseQRankSum=-3.578;DP=468;FS=3.909;HRun=0;HaplotypeScore=99.3764;InbreedingCoeff=0.2915;MQ=63.99;MQ0=16;MQRankSum=2.443;QD=1.55;ReadPosRankSum=-3.676;VQSLOD=1.0381;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:4,0:5:2.84:0,3,14	./.	./.	./.	1/1:12,0:12:5.82:47,6,0	0/1:23,0:22:0:0,0,0	./.	1/1:9,2:11:3.01:43,3,0	./.	0/0:7,0:10:5.44:0,5,24	1/1:16,0:15:0.88:2,1,0	1/1:14,0:14:2.99:24,3,0	0/1:14,0:14:25.41:37,0,25	0/0:14,0:15:2.68:0,3,11	0/0:11,0:15:2.84:0,3,14	0/0:12,0:12:2.84:0,3,14	1/1:15,0:14:0.47:1,0,0	0/1:23,0:23:4.96:5,0,23	1/1:14,0:14:2.94:18,3,0	1/1:22,0:19:3.01:43,3,0	1/1:9,1:10:3.01:43,3,0	1/1:6,3:8:3.01:43,3,0	1/1:18,1:19:14.25:123,14,0	./.	./.	0/0:13,0:15:8.36:0,8,39	./.
chr10	16067089	.	G	GCTGTCTGTCTGTCTGT	3761.02	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-0.882;DP=515;FS=30.775;HRun=0;HaplotypeScore=207.5529;InbreedingCoeff=0.8760;MQ=64.13;MQ0=4;MQRankSum=-4.233;QD=32.42;ReadPosRankSum=1.700;VQSLOD=1.1469;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:17:6.32:289,6,0	0/0:9,0:9:15.04:0,15,342	0/0:17,0:6:8.99:0,9,112	0/0:24,0:14:8.21:0,8,108	0/0:13,0:13:14.81:0,15,242	0/0:16,0:16:25.83:0,26,740	0/0:32,0:32:48.11:0,48,1361	0/0:29,0:29:57.07:0,57,912	0/0:26,0:26:51.09:0,51,1706	0/0:13,0:13:15.05:0,15,447	0/0:5,0:5:15.05:0,15,522	1/1:7,14:21:12.55:882,13,0	0/0:23,0:23:54.14:0,54,1691	0/0:25,0:25:57.17:0,57,2060	1/1:10,13:24:12.04:903,12,0	1/1:9,11:21:12.04:896,12,0	0/0:22,0:24:56.96:0,57,1847	1/1:18,0:18:31.79:695,32,0	0/0:13,0:12:14.77:0,15,249	0/0:6,0:6:12.03:0,12,298	0/0:46,0:46:99:0,108,2396	0/0:6,0:6:9.02:0,9,260	0/0:6,0:6:15.05:0,15,482	0/0:24,0:24:57.12:0,57,1712	1/1:14,0:15:6.01:97,6,0	0/0:16,0:16:21.07:0,21,634	0/0:16,0:16:30.06:0,30,1104	0/0:10,0:10:27.08:0,27,968
chr10	16069057	.	C	CA	12880.24	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-15.127;DP=756;FS=1.931;HRun=4;HaplotypeScore=69.1365;InbreedingCoeff=0.9999;MQ=84.50;MQ0=0;MQRankSum=-2.958;QD=35.39;ReadPosRankSum=4.877;VQSLOD=5.0930;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,47:52:99:1864,138,0	1/1:0,17:17:45.15:615,45,0	0/0:30,0:30:63.13:0,63,684	0/0:28,0:28:75.16:0,75,830	1/1:0,23:23:54.15:718,54,0	0/0:28,0:28:84.21:0,84,932	0/0:30,0:30:78.20:0,78,874	0/0:39,0:38:99:0,99,1123	0/0:29,0:29:78.22:0,78,885	1/1:1,39:40:99:1521,114,0	1/1:0,17:17:48.08:615,48,0	1/1:0,20:20:48.16:657,48,0	0/0:21,0:21:60.16:0,60,680	0/0:25,0:25:72.21:0,72,816	1/1:0,34:35:99:1349,99,0	1/1:2,25:27:66.22:903,66,0	1/1:1,24:25:60.20:821,60,0	1/1:2,15:17:39.13:533,39,0	0/0:23,0:23:57.15:0,57,639	0/0:33,0:33:84.24:0,84,952	0/0:30,0:30:81.21:0,81,908	0/0:24,0:24:69.20:0,69,782	0/0:18,0:18:51.11:0,51,559	0/0:34,0:34:99:0,99,1103	1/1:2,10:12:30.10:410,30,0	1/1:3,27:30:81.27:1108,81,0	1/1:2,30:32:87.29:1189,87,0	1/1:0,17:17:42.14:575,42,0
chr10	16069951	.	GCACACACA	G	358.67	PASS	AC=18;AF=0.563;AN=32;BaseQRankSum=1.944;DP=474;FS=25.652;HRun=0;HaplotypeScore=127.7680;InbreedingCoeff=0.5060;MQ=69.95;MQ0=11;MQRankSum=-2.143;QD=2.19;ReadPosRankSum=1.246;VQSLOD=0.5564;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:23:12.04:0,12,215	./.	./.	./.	./.	./.	1/1:17,0:18:2.68:11,3,0	./.	1/1:19,2:21:3.01:56,3,0	./.	./.	0/0:17,0:16:3.01:0,3,43	1/1:11,1:12:5.85:88,6,0	1/1:19,3:21:2.90:74,3,0	0/0:18,0:20:6.02:0,6,125	0/0:11,0:15:8.24:0,8,109	1/1:20,0:22:3.01:56,3,0	0/0:15,0:18:33.09:0,33,793	./.	1/1:6,0:6:3:25,3,0	0/0:32,0:32:0:0,0,0	1/1:7,0:8:3.48:56,3,0	./.	1/1:32,5:36:3.01:58,3,0	0/0:11,0:13:15.03:0,15,371	./.	1/1:12,0:16:3.01:56,3,0	./.
chr10	16070086	.	A	AAGAGAG	1296.44	PASS	AB=0.554;AC=16;AF=0.286;AN=56;BaseQRankSum=5.795;DP=451;FS=0.919;HRun=0;HaplotypeScore=116.7163;InbreedingCoeff=0.6095;MQ=67.22;MQ0=15;MQRankSum=-5.213;QD=9.60;ReadPosRankSum=-3.971;VQSLOD=1.1239;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:8,11:21:2.28:57,2,0	0/0:0,0:4:3.13:0,3,6	0/0:37,0:17:16.49:0,16,307	0/0:60,0:29:16.77:0,17,290	0/0:3,0:9:8.68:0,9,133	0/0:4,0:4:6.02:0,6,129	0/0:11,0:11:30.08:0,30,528	0/0:20,0:19:24.05:0,24,332	0/0:15,0:16:45.14:0,45,870	0/0:7,0:16:6.71:0,7,13	1/1:1,0:8:0.98:12,1,0	1/1:5,4:10:6.02:152,6,0	0/0:10,0:10:18.06:0,18,354	0/0:10,0:10:4.08:0,4,231	1/1:9,9:22:2.78:64,3,0	1/1:15,3:18:27.09:679,27,0	0/0:3,0:22:10.63:0,11,19	1/1:14,0:15:25.45:328,25,0	0/0:12,0:10:15.03:0,15,223	0/0:12,0:12:25.79:0,26,539	0/0:18,0:18:39.08:0,39,690	0/0:14,0:14:36.11:0,36,717	0/0:8,0:8:6.02:0,6,128	0/0:23,0:26:60.21:0,60,1224	1/1:7,2:9:8.71:131,9,0	0/1:2,0:17:0.32:22,0,0	0/1:4,0:15:18.42:18,0,85	0/0:0,0:4:0.89:0,1,2
chr10	16070124	.	G	GAGA	1030.06	PASS	AC=12;AF=0.222;AN=54;BaseQRankSum=7.985;DP=384;FS=30.662;HRun=0;HaplotypeScore=92.8360;InbreedingCoeff=0.8418;MQ=67.65;MQ0=25;MQRankSum=-7.135;QD=15.15;ReadPosRankSum=-4.558;VQSLOD=0.8671;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,3:8:7.22:56,7,0	0/0:3,0:3:9.03:0,9,138	0/0:66,0:23:38.18:0,38,519	0/0:98,0:32:14.29:0,14,297	0/0:2,0:2:6.02:0,6,93	0/0:3,0:3:9.03:0,9,139	0/0:6,0:6:14.22:0,14,231	0/0:14,0:12:18.03:0,18,217	0/0:9,0:9:24.08:0,24,364	0/0:10,0:10:30.10:0,30,453	0/0:3,0:3:6.02:0,6,83	1/1:4,4:9:21.90:137,22,0	0/0:5,0:4:12.04:0,12,186	0/0:5,0:5:15.05:0,15,231	1/1:11,5:16:29.66:222,30,0	1/1:6,8:16:35.83:377,36,0	0/0:14,0:14:27.09:0,27,398	1/1:4,7:11:18.06:354,18,0	0/0:5,0:5:9.02:0,9,119	0/0:10,0:10:21.06:0,21,301	0/0:10,0:10:24.08:0,24,362	0/0:8,0:8:21.07:0,21,325	0/0:1,0:1:3.01:0,3,45	0/0:21,0:21:53.89:0,54,769	1/1:5,2:8:9.37:60,9,0	0/0:13,0:13:36.12:0,36,547	0/0:8,0:8:24.04:0,24,334	./.
chr10	16070193	.	G	GA	298.45	PASS	AB=0.750;AC=7;AF=0.140;AN=50;BaseQRankSum=5.447;DP=152;FS=3.506;HRun=0;HaplotypeScore=50.3341;InbreedingCoeff=0.4176;MQ=80.65;MQ0=5;MQRankSum=-5.030;QD=14.21;ReadPosRankSum=4.612;VQSLOD=4.4031;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:2,2:4:3.48:0,3,42	0/0:1,0:1:3.01:0,3,42	0/0:31,0:12:20.59:0,21,167	0/0:30,0:12:26.39:0,26,326	0/0:1,0:1:3.01:0,3,42	0/0:1,0:1:3.01:0,3,42	0/0:3,0:3:9.01:0,9,108	0/0:7,0:7:16.41:0,16,161	0/0:1,0:1:3.01:0,3,42	0/0:8,0:7:20.13:0,20,213	0/0:2,0:2:6.02:0,6,83	1/1:2,3:5:8.95:99,9,0	./.	0/0:2,0:2:3.01:0,3,42	1/1:0,4:4:7.99:105,8,0	1/1:1,8:9:13.60:193,14,0	0/0:4,0:4:6.02:0,6,84	0/1:2,1:3:9.72:28,0,10	0/0:4,0:3:2.98:0,3,42	./.	0/0:6,0:6:18.05:0,18,234	0/0:2,0:2:6.02:0,6,84	0/0:4,0:4:9.03:0,9,125	0/0:8,0:8:22.62:0,23,284	0/0:3,2:5:6.39:0,6,85	0/0:3,0:3:9.03:0,9,126	0/0:3,0:3:9.03:0,9,126	./.
chr10	16070205	.	A	AGG	231.46	PASS	AB=0.767;AC=8;AF=0.182;AN=44;BaseQRankSum=4.807;DP=94;FS=15.862;HRun=5;HaplotypeScore=41.8914;InbreedingCoeff=0.1457;MQ=91.13;MQ0=2;MQRankSum=-4.302;QD=11.02;ReadPosRankSum=3.881;VQSLOD=-0.7044;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:1,1:2:3:0,3,29	./.	0/0:19,0:9:7.45:0,7,140	0/0:19,0:8:12.03:0,12,135	0/0:1,0:1:3.01:0,3,47	./.	0/0:1,0:1:3.01:0,3,48	0/1:3,0:4:9.16:9,0,44	0/0:1,0:1:3.01:0,3,47	0/0:6,0:6:16.86:0,17,217	0/0:2,0:2:6.02:0,6,94	1/1:2,3:5:8.98:107,9,0	./.	./.	0/1:1,2:3:11.87:76,0,12	1/1:0,4:4:11.98:125,12,0	0/0:3,0:3:9.03:0,9,147	0/1:1,1:2:23.93:32,0,24	0/0:2,0:1:2.80:0,3,13	./.	0/0:3,0:3:9.03:0,9,146	0/0:2,0:2:5.99:0,6,71	0/0:2,0:2:6.01:0,6,73	0/0:5,0:5:14.77:0,15,180	0/1:3,0:3:5.48:5,0,49	0/0:3,0:3:9.03:0,9,146	0/0:1,0:1:3.01:0,3,49	./.
chr10	16072381	.	T	TTCACAC	1337.54	PASS	AB=0.986;AC=14;AF=0.250;AN=56;BaseQRankSum=9.609;DP=594;FS=5.302;HRun=0;HaplotypeScore=130.6893;InbreedingCoeff=-0.1218;MQ=53.28;MQ0=16;MQRankSum=-7.228;QD=5.62;ReadPosRankSum=-3.722;VQSLOD=0.4704;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:27,2:34:98.70:99,0,188	0/1:6,0:6:19.11:24,0,19	0/0:27,0:6:5.86:0,6,61	0/0:29,0:5:8.94:0,9,67	0/1:20,0:19:48.56:49,0,139	0/0:21,0:21:48.02:0,48,621	0/0:25,0:25:72.03:0,72,1238	0/0:31,0:30:71.98:0,72,892	0/0:18,0:18:51.08:0,51,800	0/1:20,0:20:71.90:72,0,200	0/1:13,0:13:3.67:4,0,141	0/1:20,0:20:99:259,0,118	0/0:23,0:23:60.07:0,60,928	0/0:20,0:20:51.06:0,51,857	0/0:21,0:21:10.97:0,11,116	0/1:19,0:18:67.73:384,0,68	0/1:19,0:19:22.08:22,0,73	0/1:23,0:23:90.69:91,0,193	0/0:16,0:16:44.95:0,45,522	0/0:12,0:12:35.74:0,36,555	0/0:51,0:51:99:0,121,1641	0/0:17,0:17:12.49:0,12,665	0/0:14,0:14:41.42:0,41,619	0/0:31,0:31:84.08:0,84,1367	0/1:17,0:17:62.37:112,0,62	0/1:24,0:24:26.32:26,0,192	0/1:17,0:15:2.34:240,0,2	1/1:6,0:6:6.02:112,6,0
chr10	16072382	.	T	TCACACACACA	5463.91	PASS	AB=1.000;AC=29;AF=0.558;AN=52;BaseQRankSum=3.861;DP=638;FS=8.768;HRun=0;HaplotypeScore=181.6020;InbreedingCoeff=0.7509;MQ=52.32;MQ0=16;MQRankSum=-6.839;QD=17.68;ReadPosRankSum=-2.887;VQSLOD=2.1954;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:37,0:38:20.08:410,20,0	1/1:6,0:6:2.04:6,2,0	./.	./.	1/1:14,0:23:5.95:142,6,0	0/0:21,0:22:18.04:0,18,453	0/0:25,0:27:48.42:0,48,1325	0/0:31,0:31:24.16:0,24,624	0/0:16,0:18:30.10:0,30,836	1/1:20,0:20:10.27:283,10,0	1/1:15,0:15:5.86:85,6,0	1/1:13,11:27:21.01:909,21,0	0/0:23,0:23:30.57:0,31,846	0/0:17,0:19:33.11:0,33,882	1/1:12,13:27:1.86:147,2,0	1/1:9,12:22:30.10:1263,30,0	1/1:19,0:19:3.01:123,3,0	1/1:13,11:24:9.03:404,9,0	0/0:17,0:18:3.90:0,4,325	0/0:12,0:12:24.05:0,24,510	0/0:50,0:52:39.78:0,40,1355	0/1:15,0:16:13.69:14,0,774	0/0:16,0:16:21.06:0,21,543	0/0:30,0:32:57.19:0,57,1553	1/1:22,0:22:14.58:351,15,0	1/1:25,0:25:33.61:447,34,0	1/1:17,0:15:14.74:621,15,0	1/1:6,0:6:6.02:260,6,0
chr10	16072397	.	C	CACACACACACACACAG	7505.92	PASS	AB=1.000;AC=22;AF=0.393;AN=56;BaseQRankSum=-0.197;DP=744;FS=4.689;HRun=0;HaplotypeScore=270.2993;InbreedingCoeff=0.4447;MQ=51.73;MQ0=18;MQRankSum=-5.805;QD=21.69;ReadPosRankSum=1.550;VQSLOD=3.4902;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:37,0:37:96.28:151,0,96	1/1:2,0:12:4.19:28,4,0	0/0:30,0:7:12.01:0,12,113	0/0:37,0:13:21.01:0,21,193	1/1:21,1:21:11.97:298,12,0	0/0:19,0:19:45.01:0,45,913	0/0:33,0:33:84.87:0,85,2362	0/0:29,0:28:53.86:0,54,1143	0/0:19,0:19:45.55:0,46,1389	1/1:6,10:27:46.66:1437,47,0	1/1:10,0:21:11.54:177,12,0	0/1:27,0:27:36.34:648,0,36	0/0:25,0:25:54.44:0,54,1451	0/0:23,0:23:56.98:0,57,1624	0/1:31,0:31:99:135,0,104	0/1:26,0:25:71.66:719,0,72	1/1:4,12:23:6.01:212,6,0	0/1:22,0:22:87.49:323,0,87	0/0:26,0:26:48.53:0,49,802	0/0:17,0:17:20.58:0,21,855	0/0:66,0:66:99:0,145,2857	0/0:18,0:18:21.01:0,21,1239	0/0:19,0:19:42.49:0,42,993	0/0:37,0:37:81.11:0,81,2522	0/1:20,0:20:58.92:218,0,59	1/1:18,0:36:44.61:1698,45,0	1/1:2,13:27:1.98:1132,2,0	1/1:2,6:12:6.02:329,6,0
chr10	16072793	.	G	GT	2889.38	PASS	AB=0.552;AC=15;AF=0.268;AN=56;BaseQRankSum=-5.225;DP=550;FS=15.414;HRun=10;HaplotypeScore=62.2914;InbreedingCoeff=0.8785;MQ=74.27;MQ0=0;MQRankSum=0.694;QD=17.62;ReadPosRankSum=-2.340;VQSLOD=2.1271;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:40:82.80:0,83,667	1/1:4,7:12:23.85:226,24,0	0/0:20,0:20:30.62:0,31,234	0/0:8,0:8:7.20:0,7,42	1/1:17,5:22:18.88:333,19,0	0/0:14,1:17:2.01:0,2,201	0/0:21,0:22:31.01:0,31,395	0/0:29,0:29:43.35:0,43,342	0/0:12,0:12:20.94:0,21,172	1/1:4,21:25:54.03:525,54,0	1/1:4,13:17:29.90:263,30,0	0/0:24,0:24:35.85:0,36,295	0/0:18,0:19:49.96:0,50,399	0/0:11,0:11:23.92:0,24,193	0/0:29,0:30:64.89:0,65,518	0/0:18,0:18:32.92:0,33,271	0/1:6,26:32:1.43:600,0,1	0/0:19,0:20:43.96:0,44,351	0/0:26,0:26:44.85:0,45,363	0/0:12,0:12:10.47:0,10,96	0/0:26,0:26:12.86:0,13,313	0/0:15,0:15:17.76:0,18,137	0/0:7,0:7:11.97:0,12,98	0/0:15,0:15:29.90:0,30,243	0/0:14,0:14:17.88:0,18,144	1/1:9,14:25:24.64:423,25,0	1/1:5,17:22:48.12:510,48,0	1/1:0,8:9:20.89:206,21,0
chr10	16073882	.	C	CA	4827.87	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-12.245;DP=628;FS=5.365;HRun=9;HaplotypeScore=74.5062;InbreedingCoeff=0.9571;MQ=79.24;MQ0=0;MQRankSum=-0.816;QD=24.76;ReadPosRankSum=1.047;VQSLOD=5.6936;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:40:99:0,106,889	1/1:1,12:13:30.08:332,30,0	0/0:17,0:17:35.98:0,36,312	0/0:13,0:13:9.09:0,9,140	1/1:6,21:27:60.04:623,60,0	0/0:14,0:14:35.99:0,36,313	0/0:24,0:24:65.95:0,66,565	0/0:23,0:23:56.94:0,57,492	0/0:26,0:26:59.97:0,60,521	1/1:4,27:31:78.19:847,78,0	1/1:2,18:20:25.15:492,25,0	0/0:18,0:18:47.99:0,48,417	0/0:20,0:20:59.99:0,60,520	0/0:27,0:27:77.98:0,78,677	0/0:16,0:17:41.01:0,41,340	0/0:24,0:24:56.93:0,57,487	1/1:5,31:36:61.17:895,61,0	0/0:22,0:22:56.97:0,57,495	0/0:19,0:19:50.99:0,51,443	0/0:24,0:24:59.96:0,60,517	0/0:31,0:31:77.96:0,78,677	0/0:12,1:13:2.80:0,3,248	0/0:20,2:22:20.81:0,21,410	0/0:21,0:21:53.97:0,54,469	0/0:18,0:18:23.96:0,24,208	1/1:5,14:19:19.06:438,19,0	1/1:8,34:42:70.19:1002,70,0	1/1:0,6:6:18.05:199,18,0
chr10	16076437	.	GC	G	5950.07	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=16.557;DP=703;FS=0.326;HRun=3;HaplotypeScore=106.5860;InbreedingCoeff=0.9935;MQ=84.04;MQ0=0;MQRankSum=-1.862;QD=34.59;ReadPosRankSum=4.107;VQSLOD=4.6080;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,45:46:99:1636,132,0	0/0:4,0:4:12.04:0,12,173	0/0:26,0:26:69.22:0,69,965	0/0:18,0:18:51.17:0,51,728	0/0:25,0:25:72.21:0,72,996	0/0:23,0:23:69.23:0,69,993	0/0:31,0:31:93.31:0,93,1335	0/0:33,0:33:99:0,99,1410	0/0:24,0:24:69.19:0,69,969	0/0:24,0:24:72.23:0,72,1019	0/0:15,0:15:36.12:0,36,518	1/1:0,28:28:81.25:1004,81,0	0/0:25,0:25:75.25:0,75,1076	0/0:26,0:26:78.26:0,78,1123	1/1:0,35:34:96.30:1190,96,0	1/1:1,28:28:78.25:967,78,0	0/0:35,0:35:96.32:0,96,1381	1/1:0,16:16:45.14:558,45,0	0/0:21,0:21:63.18:0,63,870	0/0:22,0:22:63.19:0,63,872	0/0:35,0:35:96.32:0,96,1382	0/0:28,0:28:84.23:0,84,1150	0/0:17,0:17:51.17:0,51,731	0/0:37,0:37:99:0,105,1447	1/1:0,18:18:48.15:595,48,0	0/0:27,0:27:78.26:0,78,1119	0/0:24,0:24:66.22:0,66,949	0/0:11,0:11:27.06:0,27,347
chr10	16076632	.	GACAGACACACACACACACAC	G	7939.80	PASS	AB=1.000;AC=32;AF=0.571;AN=56;BaseQRankSum=-5.285;DP=755;FS=17.463;HRun=0;HaplotypeScore=324.7796;InbreedingCoeff=0.3573;MQ=50.87;MQ0=14;MQRankSum=-0.693;QD=14.65;ReadPosRankSum=-5.456;VQSLOD=0.9543;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:37:70.84:0,71,1644	0/1:16,0:16:99:177,0,635	0/0:11,0:6:11.83:0,12,94	0/1:16,0:13:4.86:5,0,70	0/1:28,0:28:99:337,0,401	1/1:3,18:22:6.02:256,6,0	1/1:30,0:30:56.89:798,57,0	1/1:33,0:31:41.33:448,41,0	1/1:3,43:47:15.52:667,16,0	0/1:37,0:36:99:455,0,1540	0/1:16,0:16:64.57:65,0,356	0/0:24,0:24:14.14:0,14,900	1/1:2,19:22:5.23:323,5,0	1/1:0,23:24:12.04:562,12,0	0/0:44,0:40:80.83:0,81,1802	0/0:36,0:32:58.74:0,59,1694	0/1:27,0:26:99:123,0,594	0/0:29,0:28:75.11:0,75,3242	1/1:9,13:21:35.59:642,36,0	1/1:1,16:17:11.99:396,12,0	1/1:44,0:40:74.99:1050,75,0	1/1:22,0:20:38.98:557,39,0	1/1:3,23:26:8:361,8,0	1/1:4,31:36:3.01:147,3,0	0/0:19,0:19:42.04:0,42,1229	0/1:31,0:31:99:318,0,1210	0/1:26,0:26:99:252,0,812	0/0:9,0:8:21.02:0,21,650
chr10	16076636	.	G	GAC	415.79	PASS	AB=0.961;AC=10;AF=0.200;AN=50;BaseQRankSum=-3.612;DP=754;FS=7.869;HRun=0;HaplotypeScore=196.1494;InbreedingCoeff=-0.0758;MQ=50.52;MQ0=14;MQRankSum=0.278;QD=1.45;ReadPosRankSum=1.995;VQSLOD=1.3291;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:44,2:42:14.31:14,0,32	0/1:14,0:16:2.52:3,0,82	./.	./.	0/0:26,0:27:18.01:0,18,187	0/0:22,0:22:5.85:0,6,46	0/0:30,0:30:12.03:0,12,125	./.	0/0:46,0:47:11.06:0,11,73	0/1:32,0:36:1.99:2,0,214	0/0:15,0:16:6.01:0,6,62	0/1:26,0:25:51.31:64,0,51	0/0:21,0:21:4.87:0,5,27	0/0:24,0:24:11.27:0,11,91	1/1:36,10:42:5.99:66,6,0	0/1:34,3:33:46.93:94,0,47	0/1:27,0:28:4.13:4,0,54	0/1:22,7:28:72.62:197,0,73	0/0:20,0:20:14.87:0,15,138	0/0:17,0:17:6.48:0,6,63	0/0:42,0:38:9.02:0,9,92	0/0:23,0:21:12.01:0,12,116	0/0:24,0:24:5.75:0,6,64	0/0:35,0:35:2.80:0,3,13	0/1:20,0:20:49.41:98,0,49	0/0:28,0:32:12.09:0,12,178	0/0:21,0:24:23.68:0,24,205	0/0:9,0:8:12.03:0,12,125
chr10	16076638	.	C	CAG	3843.59	PASS	AB=0.965;AC=20;AF=0.357;AN=56;BaseQRankSum=-4.601;DP=761;FS=50.177;HRun=0;HaplotypeScore=186.2920;InbreedingCoeff=0.0334;MQ=50.30;MQ0=14;MQRankSum=1.381;QD=8.09;ReadPosRankSum=4.201;VQSLOD=1.3637;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:47,0:43:14.67:435,0,15	1/1:16,0:16:2.33:175,2,0	0/0:8,0:4:6.01:0,6,59	0/0:11,0:8:17.91:0,18,168	0/1:27,0:27:24.69:151,0,25	0/0:22,0:22:5.68:0,6,29	0/0:30,0:30:49.52:0,50,357	0/0:33,0:31:11.80:0,12,95	0/1:47,0:47:1.92:2,0,62	0/1:37,0:36:7.19:420,0,7	0/1:16,0:16:7.62:59,0,8	0/1:7,19:26:32.81:95,0,33	0/0:21,0:21:8.08:0,8,43	0/1:25,0:25:5.81:6,0,43	1/1:46,0:43:49.97:561,50,0	0/1:39,0:35:56.41:267,0,56	1/1:30,1:30:19.14:272,19,0	0/1:29,0:28:68.30:457,0,68	0/0:20,0:20:25.62:0,26,165	0/0:17,0:17:8.55:0,9,45	0/0:41,0:37:55.45:0,55,421	0/0:23,0:21:36.06:0,36,234	0/0:25,0:25:8.41:0,8,47	0/0:35,0:35:2.84:0,3,14	0/1:21,0:21:64.45:247,0,64	1/1:33,0:33:37.43:445,37,0	0/1:24,0:24:14.91:206,0,15	0/1:9,0:8:18.72:46,0,19
chr10	16077550	.	A	AG	13368.22	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=21.047;DP=733;FS=11.251;HRun=1;HaplotypeScore=126.8413;InbreedingCoeff=0.9952;MQ=66.45;MQ0=0;MQRankSum=-4.105;QD=36.93;ReadPosRankSum=4.371;VQSLOD=3.2677;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,44:46:99:1571,117,0	1/1:0,7:7:21.06:273,21,0	0/0:27,0:26:78.24:0,78,989	0/0:30,0:25:72.22:0,72,898	1/1:3,29:32:78.24:1051,78,0	0/0:20,0:20:60.20:0,60,779	0/0:29,0:29:87.26:0,87,1102	0/0:27,0:27:75.24:0,75,963	0/0:20,0:20:60.18:0,60,765	1/1:3,17:20:60.14:800,60,0	1/1:2,13:15:39.13:530,39,0	1/1:1,25:26:72.23:967,72,0	0/0:17,0:17:51.17:0,51,659	0/0:29,0:29:87.27:0,87,1116	1/1:2,31:33:90.14:1223,90,0	1/1:0,28:28:81.27:1123,81,0	1/1:1,39:40:99:1360,99,0	1/1:2,38:40:99:1561,114,0	0/0:23,0:23:66.20:0,66,843	0/0:24,0:24:69.21:0,69,882	0/0:49,0:49:99:0,144,1822	0/0:29,0:29:84.26:0,84,1077	0/0:21,0:21:60.19:0,60,779	0/0:26,0:26:75.24:0,75,971	1/1:0,21:21:51.17:706,51,0	1/1:0,25:25:75.25:1046,75,0	1/1:1,24:25:72.19:989,72,0	1/1:0,4:4:12.04:167,12,0
chr10	16077806	.	A	AT	5424.85	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-8.951;DP=620;FS=1.564;HRun=7;HaplotypeScore=99.3734;InbreedingCoeff=0.9981;MQ=70.07;MQ0=0;MQRankSum=-1.019;QD=29.81;ReadPosRankSum=0.406;VQSLOD=4.5580;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:87.58:0,88,841	1/1:3,9:11:21.06:254,21,0	0/0:11,0:11:24.01:0,24,221	0/0:10,0:10:24:0,24,221	1/1:4,29:33:87.22:1034,87,0	0/0:23,0:23:57.08:0,57,550	0/0:24,0:24:54.08:0,54,521	0/0:34,0:34:87.11:0,87,829	0/0:22,0:22:54.05:0,54,511	1/1:3,28:32:84.26:1014,84,0	1/1:1,17:18:42.09:491,42,0	0/0:18,0:18:48.08:0,48,463	0/0:22,0:22:63.08:0,63,601	0/0:17,0:17:48.07:0,48,458	0/0:31,0:31:78.11:0,78,753	0/0:30,0:30:81.13:0,81,782	1/1:2,25:27:72.22:870,72,0	0/0:12,0:12:27.04:0,27,261	0/0:23,0:23:51.06:0,51,487	0/0:30,0:30:81.11:0,81,777	0/0:19,0:19:48.06:0,48,457	0/0:21,0:21:54.08:0,54,521	0/0:23,0:23:60.09:0,60,579	0/0:12,0:12:33.05:0,33,319	0/0:15,0:15:42.05:0,42,399	1/1:1,20:21:57.16:676,57,0	1/1:5,24:29:66.20:796,66,0	1/1:2,8:10:24.07:290,24,0
chr10	16077823	.	T	TCACA	9976.58	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=1.002;DP=609;FS=0.773;HRun=0;HaplotypeScore=127.5734;InbreedingCoeff=0.9988;MQ=79.97;MQ0=0;MQRankSum=-3.451;QD=66.07;ReadPosRankSum=3.572;VQSLOD=6.7777;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,35:42:99:2866,108,0	0/0:9,0:8:24.08:0,24,448	0/0:22,0:22:63.19:0,63,1095	0/0:13,0:13:35.83:0,36,593	0/0:30,0:30:69.24:0,69,1267	0/0:19,0:19:57.20:0,57,1064	0/0:18,0:18:54.17:0,54,976	0/0:29,0:29:78.26:0,78,1428	0/0:22,0:22:60.21:0,60,1112	0/0:29,0:29:81.28:0,81,1496	0/0:14,0:14:33.11:0,33,596	1/1:2,21:24:57.20:1516,57,0	0/0:24,0:24:60.20:0,60,1103	0/0:19,0:19:51.17:0,51,945	1/1:7,24:32:75.26:1998,75,0	1/1:5,27:32:84.29:2238,84,0	0/0:31,0:31:87.30:0,87,1613	1/1:1,9:10:24.08:640,24,0	0/0:15,0:15:39.13:0,39,728	0/0:22,0:22:60.21:0,60,1120	0/0:23,0:23:60.19:0,60,1088	0/0:17,0:17:51.17:0,51,952	0/0:23,0:23:63.20:0,63,1122	0/0:12,0:12:33.11:0,33,607	1/1:3,8:11:27.09:719,27,0	0/0:22,0:22:63.20:0,63,1140	0/0:30,0:30:81.24:0,81,1446	0/0:15,0:15:36.12:0,36,651
chr10	16078113	.	ACCT	A	4564.80	PASS	AB=0.676;AC=21;AF=0.375;AN=56;BaseQRankSum=7.814;DP=490;FS=0.434;HRun=0;HaplotypeScore=110.4624;InbreedingCoeff=0.4369;MQ=63.75;MQ0=0;MQRankSum=-3.837;QD=21.84;ReadPosRankSum=4.880;VQSLOD=4.6582;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,20:29:51.17:737,51,0	0/1:4,1:5:34.39:34,0,35	0/0:20,0:15:17.95:0,18,292	0/0:23,0:19:15.50:0,16,376	0/1:11,9:20:12.21:389,0,12	0/0:16,0:16:24.08:0,24,474	0/0:28,0:28:60.18:0,60,1163	0/0:35,0:35:54.14:0,54,939	0/0:11,0:11:24.08:0,24,463	0/1:7,4:11:40.76:153,0,41	0/1:6,8:14:67.81:195,0,68	1/1:2,12:14:27.09:390,27,0	0/0:19,0:19:42.14:0,42,786	0/0:15,0:15:33.11:0,33,646	1/1:4,17:21:9.18:407,9,0	1/1:6,13:19:26.43:489,26,0	1/1:8,5:13:12.04:173,12,0	1/1:1,9:10:21.07:304,21,0	0/0:15,0:15:30.10:0,30,561	0/0:22,0:22:60.20:0,60,1162	0/0:23,0:22:45.62:0,46,897	0/0:16,0:16:24.08:0,24,447	0/0:16,0:16:36.12:0,36,732	0/0:22,0:22:51.10:0,51,978	1/1:2,8:10:5.29:244,5,0	0/1:6,13:20:12.75:530,0,13	0/1:4,5:9:45.26:164,0,45	0/1:5,9:14:58.90:355,0,59
chr10	16078152	.	C	CCT	3511.39	PASS	AB=0.882;AC=24;AF=0.429;AN=56;BaseQRankSum=13.171;DP=513;FS=123.297;HRun=0;HaplotypeScore=167.9436;InbreedingCoeff=-0.4933;MQ=43.70;MQ0=7;MQRankSum=-11.317;QD=8.73;ReadPosRankSum=2.397;VQSLOD=0.7559;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:21,4:25:99:184,0,628	0/1:9,2:9:13.99:141,0,14	0/0:33,0:12:32.40:0,32,425	0/0:23,0:6:6.02:0,6,90	0/1:8,3:17:27.82:189,0,28	0/1:8,2:10:95.18:95,0,250	0/1:25,1:28:27.86:28,0,857	0/1:28,2:38:99:410,0,819	0/1:11,3:17:99:160,0,341	0/1:6,2:12:99:204,0,102	0/1:5,1:8:27.76:162,0,28	0/1:13,3:17:99:164,0,438	0/1:14,1:16:93.10:93,0,504	0/1:17,3:22:99:134,0,639	0/1:24,3:28:99:242,0,603	0/1:23,3:27:99:236,0,725	1/1:0,1:3:9.01:141,9,0	0/0:9,0:8:24.08:0,24,372	0/1:15,0:14:52.08:52,0,337	0/1:23,3:26:96.30:96,0,704	0/0:19,0:19:40.62:0,41,613	0/1:18,2:20:97.11:97,0,563	0/1:19,4:23:68.54:69,0,603	0/0:15,0:16:30.09:0,30,468	0/0:11,0:11:30.10:0,30,457	0/1:9,1:14:99:190,0,154	1/1:7,3:12:6.24:228,6,0	0/1:4,4:8:68.76:197,0,69
chr10	16078175	.	C	CCTAT	796.87	PASS	AB=0.980;AC=11;AF=0.196;AN=56;BaseQRankSum=6.294;DP=361;FS=29.075;HRun=0;HaplotypeScore=156.7740;InbreedingCoeff=-0.0391;MQ=40.59;MQ0=2;MQRankSum=-2.552;QD=5.61;ReadPosRankSum=-0.056;VQSLOD=1.1250;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:10.06:0,10,627	0/0:4,0:4:5.03:0,5,31	0/0:21,0:7:18.03:0,18,304	0/0:27,0:8:14.84:0,15,236	0/1:8,0:8:0.17:1,0,0	0/0:9,0:10:6.87:0,7,261	0/0:19,0:19:30.06:0,30,810	0/0:26,0:25:41.61:0,42,771	0/1:12,2:14:99:178,0,233	1/1:6,1:7:4.28:159,4,0	0/0:3,0:3:3.85:0,4,11	0/1:19,0:19:64.48:64,0,451	0/1:9,0:9:26.73:27,0,392	0/0:15,0:15:26.57:0,27,500	0/1:23,0:23:60.87:61,0,525	0/1:24,0:24:99:111,0,754	0/0:5,0:5:11.08:0,11,94	0/0:4,0:4:12.04:0,12,240	0/0:9,0:9:26.11:0,26,360	0/0:17,0:17:1.09:0,1,328	0/0:13,0:15:15.65:0,16,509	0/1:17,1:18:99:100,0,238	0/1:16,0:16:99:218,0,274	0/0:10,0:10:27.05:0,27,441	0/0:6,0:6:12.04:0,12,220	0/0:4,0:3:6.22:0,6,29	0/1:4,0:4:7.85:17,0,8	0/0:6,0:6:9.43:0,9,26
chr10	16078176	.	C	CT	478.86	PASS	AB=0.925;AC=18;AF=0.321;AN=56;BaseQRankSum=7.946;DP=335;FS=40.011;HRun=0;HaplotypeScore=121.9238;InbreedingCoeff=-0.0496;MQ=41.08;MQ0=2;MQRankSum=-4.158;QD=2.99;ReadPosRankSum=-1.375;VQSLOD=1.2881;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:6.09:0,6,423	1/1:3,0:3:0.82:23,1,0	0/0:21,0:7:17.40:0,17,219	0/0:27,0:8:14.90:0,15,200	1/1:4,2:6:4.44:14,4,0	0/0:10,0:10:9.31:0,9,189	0/0:15,0:15:24.55:0,25,504	0/0:22,0:21:42.86:0,43,542	0/1:12,1:13:99:111,0,156	0/1:3,1:4:0.02:79,0,0	1/1:2,0:2:5.59:26,6,0	0/1:19,0:19:20.84:21,0,310	0/1:8,1:9:16.30:16,0,274	0/0:14,0:14:22.61:0,23,342	0/1:22,0:22:55.48:55,0,366	0/1:19,2:21:54.68:55,0,463	0/0:4,0:4:7.47:0,7,59	0/0:4,0:4:12.04:0,12,168	0/0:9,0:9:24.94:0,25,264	0/1:14,2:16:9.22:9,0,240	0/0:15,0:15:0.97:0,1,364	0/1:13,3:16:72.18:72,0,175	0/1:12,3:15:99:106,0,179	0/0:10,0:10:27.01:0,27,321	0/0:6,0:6:12.04:0,12,165	0/1:4,0:3:4.53:5,0,16	0/1:4,0:4:10.88:34,0,11	0/1:6,0:6:8.68:9,0,18
chr10	16078942	.	C	CT	105.86	PASS	AB=0.836;AC=8;AF=0.143;AN=56;BaseQRankSum=4.467;DP=269;FS=2.727;HRun=0;HaplotypeScore=74.2306;InbreedingCoeff=-0.1255;MQ=59.86;MQ0=4;MQRankSum=-1.615;QD=1.45;ReadPosRankSum=-0.609;VQSLOD=1.8569;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,1:18:3.20:0,3,237	0/0:1,0:1:3.01:0,3,42	0/1:18,0:9:2.38:2,0,127	0/1:14,0:8:23.31:23,0,94	0/1:5,6:9:32.95:33,0,37	0/0:8,0:8:11.93:0,12,121	0/0:14,0:15:7.15:0,7,379	0/0:6,0:6:12.01:0,12,158	0/0:10,0:9:20.81:0,21,292	0/0:2,0:2:3.01:0,3,42	0/1:3,1:3:0:0,0,0	0/0:11,0:11:2.87:0,3,130	0/0:13,0:13:14.95:0,15,413	0/0:8,0:8:4.52:0,5,144	0/1:9,0:9:4.85:5,0,68	0/0:15,0:14:18.73:0,19,161	0/0:8,0:8:14.08:0,14,207	0/0:11,0:9:17.09:0,17,86	0/0:10,0:10:23.66:0,24,290	0/0:9,0:9:7.69:0,8,87	0/0:15,0:15:36.04:0,36,459	0/0:9,0:9:13.71:0,14,125	0/0:8,0:8:7.26:0,7,87	0/0:9,0:9:24.04:0,24,313	0/0:8,0:8:23.42:0,23,149	0/1:5,2:7:49.92:72,0,50	0/1:6,1:8:54.61:55,0,163	0/1:1,1:2:32.89:33,0,36
chr10	16078950	.	CCT	C	347.16	PASS	AB=0.875;AC=17;AF=0.304;AN=56;BaseQRankSum=4.187;DP=310;FS=23.492;HRun=0;HaplotypeScore=89.0133;InbreedingCoeff=-0.2779;MQ=63.55;MQ0=4;MQRankSum=-4.133;QD=1.78;ReadPosRankSum=-0.755;VQSLOD=-0.5246;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:21,1:21:4.59:5,0,898	0/0:2,0:2:6.02:0,6,97	0/1:21,0:10:2.98:3,0,277	0/1:24,0:15:52.39:52,0,273	0/1:3,7:9:35.53:36,0,55	0/1:11,0:11:2.80:3,0,240	0/1:13,2:15:26.50:27,0,433	0/0:8,0:8:12.03:0,12,188	0/0:11,1:11:27.05:0,27,505	0/0:3,0:3:9:0,9,123	1/1:4,2:5:3:31,3,0	0/0:11,1:12:26.58:0,27,470	0/1:14,0:14:15.77:16,0,432	0/1:6,2:8:61.06:61,0,318	0/0:12,0:12:36.12:0,36,663	0/1:14,2:15:56.32:56,0,591	0/1:7,1:8:1.38:1,0,343	0/0:11,1:9:21.07:0,21,387	0/1:8,0:8:14.50:15,0,342	0/1:10,1:11:31.94:32,0,220	0/0:17,0:17:45.15:0,45,849	0/0:9,0:9:12.11:0,12,223	0/0:7,1:8:6.47:0,6,168	0/0:10,0:10:30.10:0,30,589	0/0:10,0:10:30.10:0,30,570	0/1:3,3:6:23.93:77,0,24	0/1:10,1:11:48.34:48,0,355	0/1:1,1:2:35.01:35,0,55
chr10	16078951	.	CTA	C	230.15	PASS	AB=0.980;AC=15;AF=0.268;AN=56;BaseQRankSum=4.127;DP=304;FS=28.176;HRun=0;HaplotypeScore=88.2143;InbreedingCoeff=-0.1429;MQ=64.25;MQ0=4;MQRankSum=-5.779;QD=1.54;ReadPosRankSum=-1.862;VQSLOD=0.0234;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:21:0.81:0,1,871	0/0:2,0:2:6.02:0,6,110	0/1:19,2:11:15.54:16,0,310	0/1:24,0:15:51.80:52,0,278	0/1:11,0:9:17.64:18,0,51	0/0:9,0:9:12.68:0,13,277	0/1:12,1:13:21.39:21,0,393	0/0:6,0:6:8.93:0,9,168	0/0:12,0:11:23.88:0,24,461	0/0:3,0:3:9.03:0,9,153	1/1:4,1:5:2.90:16,3,0	0/0:11,1:12:5.53:0,6,438	0/1:12,0:14:49.79:50,0,372	0/1:8,0:8:46.32:46,0,313	0/0:12,0:12:36.12:0,36,677	0/1:14,0:13:32.36:32,0,592	0/0:9,0:9:13.59:0,14,338	0/0:12,0:9:21.07:0,21,403	0/1:8,0:9:35.05:35,0,374	0/1:10,0:10:8.05:8,0,267	0/0:17,0:17:45.15:0,45,859	0/0:8,0:8:1.91:0,2,214	0/0:8,0:9:3.89:0,4,215	0/0:11,0:11:33.11:0,33,619	0/0:10,0:10:30.10:0,30,576	1/1:6,0:6:7.80:53,8,0	0/1:11,0:11:20.58:21,0,360	0/1:2,0:2:15.10:15,0,52
chr10	16078952	.	T	TTCTC	507.23	PASS	AB=0.930;AC=14;AF=0.250;AN=56;BaseQRankSum=3.652;DP=304;FS=21.421;HRun=0;HaplotypeScore=100.4059;InbreedingCoeff=-0.0759;MQ=65.90;MQ0=4;MQRankSum=-4.814;QD=4.09;ReadPosRankSum=-1.696;VQSLOD=0.2836;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:21:4.71:0,5,939	0/0:2,0:2:6.02:0,6,99	0/0:22,0:12:6.91:0,7,308	0/1:25,0:16:8.21:8,0,313	0/1:9,0:8:23.93:24,0,58	0/1:7,1:8:68.61:69,0,254	0/1:11,1:13:99:111,0,453	0/0:5,0:6:9.03:0,9,163	0/0:11,0:10:24.08:0,24,500	0/0:3,0:3:9:0,9,138	1/1:6,0:5:2.92:18,3,0	0/0:11,0:11:23.92:0,24,491	0/1:13,1:13:96.31:96,0,410	0/0:8,0:8:7.86:0,8,356	0/0:12,0:12:36.12:0,36,693	0/0:13,0:13:12.18:0,12,650	0/0:10,0:10:18.53:0,19,377	0/0:12,0:9:21.07:0,21,425	0/1:8,0:9:99:100,0,377	0/1:8,2:10:24.95:25,0,249	0/0:17,0:17:45.15:0,45,902	0/0:8,0:8:11.97:0,12,241	0/1:8,0:9:41:41,0,188	0/0:12,0:12:33.07:0,33,635	0/0:10,0:10:30.10:0,30,612	1/1:5,0:6:6.02:76,6,0	0/1:9,0:11:50.95:51,0,379	0/1:2,0:2:42.32:42,0,57
chr10	16078985	.	CTT	C	4462.49	PASS	AB=0.533;AC=25;AF=0.463;AN=54;BaseQRankSum=11.783;DP=388;FS=12.997;HRun=2;HaplotypeScore=102.8226;InbreedingCoeff=0.9213;MQ=81.86;MQ0=3;MQRankSum=-6.869;QD=28.42;ReadPosRankSum=4.024;VQSLOD=3.1955;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,20:26:62.27:701,62,0	1/1:0,5:5:15.05:180,15,0	0/0:40,0:28:44.65:0,45,847	0/0:50,0:31:25.36:0,25,993	1/1:1,1:2:3.01:37,3,0	0/0:8,0:8:24.08:0,24,455	0/0:12,0:12:33.11:0,33,669	0/0:8,0:8:21.07:0,21,372	0/0:8,0:8:24.08:0,24,475	1/1:1,6:7:18.05:205,18,0	1/1:1,4:5:12.04:147,12,0	1/1:2,10:11:21.01:251,21,0	0/0:12,0:11:33.11:0,33,636	0/0:8,0:8:24.08:0,24,463	1/1:2,14:16:46.02:532,46,0	1/1:0,15:14:42.13:500,42,0	1/1:5,8:13:25.32:259,25,0	1/1:5,17:19:48.13:563,48,0	0/0:12,0:12:36.07:0,36,606	0/0:12,0:12:33.11:0,33,659	0/0:21,0:21:60.13:0,60,1074	0/0:13,0:13:39.13:0,39,789	0/0:10,0:10:30.10:0,30,606	0/0:16,0:16:48.15:0,48,936	1/1:0,11:11:33.10:389,33,0	0/1:1,7:8:1.44:216,0,1	1/1:1,13:14:42.09:483,42,0	./.
chr10	16079015	.	ATAGTG	A	4762.02	PASS	AC=14;AF=0.259;AN=54;BaseQRankSum=6.708;DP=441;FS=26.192;HRun=0;HaplotypeScore=134.8261;InbreedingCoeff=0.9937;MQ=82.74;MQ0=0;MQRankSum=-11.561;QD=58.79;ReadPosRankSum=2.262;VQSLOD=3.6373;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:36:84.29:0,84,2675	1/1:0,6:6:18.06:401,18,0	0/0:18,0:18:54.02:0,54,1596	0/0:16,0:15:39.13:0,39,1100	1/1:0,10:10:30.10:639,30,0	0/0:11,0:11:30.10:0,30,969	0/0:18,0:18:51.18:0,51,1646	0/0:21,0:21:63.21:0,63,1934	0/0:7,0:7:21.07:0,21,677	1/1:1,12:13:33.09:676,33,0	1/1:0,5:5:15.05:334,15,0	0/0:12,0:11:21.07:0,21,678	0/0:18,0:18:48.16:0,48,1544	0/0:11,0:11:33.11:0,33,1062	0/0:19,0:19:57.20:0,57,1822	0/0:16,0:15:42.14:0,42,1356	1/1:3,14:17:33.11:707,33,0	0/0:32,0:29:75.26:0,75,2366	0/0:15,0:15:42.14:0,42,1355	0/0:17,0:17:51.13:0,51,1565	0/0:24,0:24:69.24:0,69,2221	0/0:16,0:16:45.15:0,45,1452	0/0:16,0:16:45.15:0,45,1452	0/0:22,0:22:66.23:0,66,2130	0/0:13,0:13:39.13:0,39,1246	1/1:0,12:12:36.12:802,36,0	1/1:0,18:18:54.19:1203,54,0	./.
chr10	16079782	.	ATTTTGCCTAAAGTTTCAGGTTGATG	A	15235.02	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=14.267;DP=649;FS=4.030;HRun=0;HaplotypeScore=416.6856;InbreedingCoeff=0.9979;MQ=84.48;MQ0=0;MQRankSum=-14.160;QD=107.29;ReadPosRankSum=5.257;VQSLOD=3.6749;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,15:26:29.40:1816,29,0	0/0:10,0:10:30.10:0,30,3250	0/0:19,0:19:57.20:0,57,4340	0/0:25,0:26:74.99:0,75,4905	0/0:27,0:27:78.27:0,78,8618	0/0:25,0:25:75.26:0,75,7640	0/0:26,0:26:72.25:0,72,7510	0/0:25,0:25:75.26:0,75,6454	0/0:31,0:31:93.32:0,93,10383	0/0:27,0:27:81.28:0,81,7546	0/0:13,0:13:39.13:0,39,3857	1/1:10,17:27:39.13:2686,39,0	0/0:26,0:26:78.25:0,78,7739	0/0:23,0:23:69.24:0,69,6903	1/1:13,17:30:48.16:3185,48,0	1/1:12,24:36:69.24:4512,69,0	0/0:23,0:23:69.24:0,69,6468	1/1:3,6:9:18.06:1172,18,0	0/0:19,0:19:54.19:0,54,4430	0/0:26,0:26:78.27:0,78,8284	0/0:17,0:17:51.18:0,51,5322	0/0:23,0:23:69.24:0,69,6422	0/0:24,0:24:72.25:0,72,6750	0/0:38,0:38:99:0,114,12136	1/1:4,10:14:30.10:1864,30,0	0/0:25,0:25:75.25:0,75,8492	0/0:23,0:23:69.24:0,69,7334	0/0:11,0:11:30.10:0,30,3159
chr10	16080232	.	TCACA	T	5430.83	PASS	AB=0.868;AC=49;AF=0.907;AN=54;BaseQRankSum=3.887;DP=663;FS=8.970;HRun=0;HaplotypeScore=150.9859;InbreedingCoeff=0.1722;MQ=59.44;MQ0=8;MQRankSum=2.004;QD=8.68;ReadPosRankSum=3.568;VQSLOD=3.2822;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:23,7:30:9.03:139,9,0	1/1:4,0:10:12.01:112,12,0	0/0:15,0:3:0.47:0,0,1	./.	1/1:9,0:15:12.01:112,12,0	1/1:15,5:21:20.99:277,21,0	0/1:28,10:40:12.69:289,0,13	0/1:34,0:34:3.67:13,0,4	1/1:18,11:30:27.09:417,27,0	1/1:19,0:26:15.02:139,15,0	1/1:7,0:16:9.01:84,9,0	1/1:16,11:29:15.04:195,15,0	1/1:14,7:22:9.50:139,10,0	1/1:18,2:21:21.03:278,21,0	1/1:20,15:36:36.12:536,36,0	1/1:16,16:37:50.91:696,51,0	1/1:16,0:21:2.88:27,3,0	1/1:16,7:23:21.12:354,21,0	1/1:12,2:17:11.40:129,11,0	1/1:14,5:19:5.85:93,6,0	1/1:32,13:45:6.02:93,6,0	1/1:8,7:16:9.03:129,9,0	0/1:9,2:11:0:0,0,0	1/1:15,18:33:36.12:556,36,0	1/1:7,2:10:3.01:46,3,0	1/1:16,1:26:21.03:214,21,0	1/1:9,0:22:29.91:279,30,0	1/1:4,0:9:9.01:84,9,0
chr10	16080634	.	ACAAATAGTGC	A	7643.11	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=13.098;DP=591;FS=5.653;HRun=0;HaplotypeScore=176.9757;InbreedingCoeff=0.9978;MQ=83.84;MQ0=0;MQRankSum=-13.965;QD=73.49;ReadPosRankSum=2.566;VQSLOD=4.0988;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,13:15:27.09:914,27,0	0/0:6,0:6:18.06:0,18,862	0/0:19,0:19:57.18:0,57,2508	0/0:19,0:19:54.14:0,54,2336	0/0:37,0:37:99:0,111,5508	0/0:23,0:23:69.24:0,69,3723	0/0:22,0:22:66.23:0,66,3263	0/0:29,0:29:84.29:0,84,4340	0/0:21,0:21:63.22:0,63,3209	0/0:32,0:32:96.32:0,96,4903	0/0:28,0:28:84.29:0,84,4417	1/1:1,12:13:33.11:1119,33,0	0/0:22,0:22:66.23:0,66,3342	0/0:25,0:25:75.26:0,75,3691	1/1:4,13:17:36.04:993,36,0	1/1:2,25:27:63.14:2074,63,0	0/0:18,0:18:54.19:0,54,2745	1/1:1,13:14:30.10:1018,30,0	0/0:16,0:16:48.16:0,48,2384	0/0:28,0:28:81.28:0,81,4347	0/0:18,0:18:54.19:0,54,2774	0/0:17,0:17:51.14:0,51,2503	0/0:20,0:20:60.19:0,60,3091	0/0:18,0:18:54.14:0,54,2597	1/1:1,17:18:45.15:1525,45,0	0/0:27,0:27:81.28:0,81,4184	0/0:33,0:33:99:0,99,4928	0/0:9,0:9:27.09:0,27,1457
chr10	16082890	.	AGGGAAGCTGG	A	6774.51	PASS	AC=14;AF=0.259;AN=54;BaseQRankSum=13.121;DP=562;FS=3.960;HRun=0;HaplotypeScore=185.4993;InbreedingCoeff=0.9933;MQ=85.96;MQ0=0;MQRankSum=-12.831;QD=61.03;ReadPosRankSum=-0.009;VQSLOD=4.4126;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,154,7434	1/1:0,8:8:12:320,12,0	0/0:19,0:19:45.13:0,45,1854	0/0:23,0:23:63:0,63,2661	1/1:0,17:17:28.95:253,29,0	0/0:18,0:18:51.16:0,51,2257	0/0:20,0:20:57.20:0,57,3032	0/0:28,0:28:81.27:0,81,4027	0/0:19,0:19:57.20:0,57,2845	1/1:0,15:15:42.01:1124,42,0	1/1:0,11:11:23.82:484,24,0	0/0:22,0:22:66.22:0,66,3265	0/0:23,0:23:66.23:0,66,3392	0/0:15,0:15:45.11:0,45,1995	0/0:15,0:15:45.15:0,45,2297	0/0:16,0:16:48.15:0,48,2319	1/1:0,21:21:39.07:1194,39,0	0/0:26,0:26:75.26:0,75,3974	0/0:15,0:15:39.13:0,39,1781	0/0:16,0:16:48.15:0,48,2421	0/0:47,0:47:99:0,138,7155	0/0:19,0:19:54.14:0,54,2401	0/0:8,0:8:24.05:0,24,949	0/0:29,0:29:87.29:0,87,4307	0/0:20,0:20:60.20:0,60,3000	1/1:1,20:21:60.21:2000,60,0	1/1:1,17:18:42.14:1400,42,0	./.
chr10	16083501	.	T	TTATGCTGTGA	37200.46	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-10.451;DP=624;FS=22.734;HRun=0;HaplotypeScore=169.5035;InbreedingCoeff=0.9855;MQ=81.79;MQ0=0;MQRankSum=-18.757;QD=115.89;ReadPosRankSum=1.882;VQSLOD=3.3234;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,26:38:74.32:3945,74,0	1/1:3,9:13:27.09:1436,27,0	0/0:27,0:27:72.25:0,72,2020	0/0:18,0:18:45.15:0,45,1460	1/1:10,12:24:45.15:2296,45,0	0/0:19,0:19:54.15:0,54,1597	0/0:18,0:18:54.17:0,54,1641	0/0:26,0:26:69.24:0,69,2002	0/0:18,0:18:51.18:0,51,1656	1/1:7,21:32:90.29:4398,90,0	1/1:10,13:25:51.18:2637,51,0	1/1:3,17:23:48.16:2545,48,0	0/0:21,0:21:60.21:0,60,1953	0/0:21,0:21:63.20:0,63,1926	1/1:11,12:24:48.16:2491,48,0	1/1:4,23:29:75.26:3809,75,0	1/1:5,11:18:45.15:2324,45,0	1/1:7,10:19:39.13:2038,39,0	0/0:16,0:16:48.16:0,48,1521	0/0:29,0:29:78.24:0,78,2399	0/0:32,0:32:93.32:0,93,2938	0/0:15,0:15:42.14:0,42,1318	0/0:20,0:20:60.21:0,60,1981	0/0:23,0:23:63.22:0,63,1995	1/1:5,15:21:51.18:2680,51,0	1/1:12,10:27:81.26:3427,81,0	1/1:3,16:23:54.18:2854,54,0	1/1:0,2:5:6.02:319,6,0
chr10	16083668	.	GTA	G	5230.32	PASS	AB=1.000;AC=51;AF=0.911;AN=56;BaseQRankSum=-3.557;DP=483;FS=1.743;HRun=0;HaplotypeScore=90.1564;InbreedingCoeff=0.2077;MQ=55.59;MQ0=11;MQRankSum=2.163;QD=11.27;ReadPosRankSum=-0.036;VQSLOD=4.6716;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:24:25.61:187,26,0	1/1:4,2:6:14.93:116,15,0	0/1:18,0:5:13.91:14,0,54	0/0:19,0:10:12.69:0,13,201	1/1:15,3:18:8.61:50,9,0	1/1:0,16:16:3.01:46,3,0	1/1:0,20:20:14.97:199,15,0	1/1:24,0:22:37.38:389,37,0	1/1:13,1:14:15.49:286,15,0	1/1:18,2:19:39.18:338,39,0	1/1:7,2:9:17.97:148,18,0	0/1:11,0:11:2.83:19,0,3	1/1:0,18:18:8.72:136,9,0	1/1:1,16:17:10.57:120,11,0	1/1:18,0:18:14.14:155,14,0	1/1:16,0:16:17.82:143,18,0	1/1:11,6:17:41.55:306,42,0	1/1:22,0:22:2.17:138,2,0	1/1:15,0:14:27.49:216,27,0	1/1:18,0:18:14.89:264,15,0	0/1:45,0:43:59.38:335,0,59	1/1:14,0:14:35.94:312,36,0	1/1:0,13:13:6.01:90,6,0	1/1:26,3:29:74.76:716,75,0	1/1:15,0:15:2.97:25,3,0	1/1:1,12:13:29.94:247,30,0	1/1:9,1:10:23.86:185,24,0	1/1:4,0:4:5.99:50,6,0
chr10	16083696	.	GTGTGTGTGTGTA	G	1778.63	PASS	AC=14;AF=0.259;AN=54;BaseQRankSum=5.432;DP=504;FS=8.249;HRun=0;HaplotypeScore=173.9538;InbreedingCoeff=0.8632;MQ=57.03;MQ0=13;MQRankSum=-4.130;QD=19.98;ReadPosRankSum=-0.935;VQSLOD=1.8220;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:32.91:0,33,770	1/1:3,1:4:8.24:190,8,0	0/0:27,0:16:31.70:0,32,372	0/0:28,0:22:31.31:0,31,672	1/1:14,3:17:12.43:148,12,0	0/0:17,0:17:6.49:0,6,175	0/0:22,0:22:34.46:0,34,937	0/0:24,0:22:54.29:0,54,1108	0/0:11,0:11:29.39:0,29,1094	1/1:16,1:16:33.99:510,34,0	1/1:12,2:14:9:160,9,0	0/0:7,0:7:6.48:0,6,192	0/0:16,0:16:18.03:0,18,518	0/0:19,0:19:28.85:0,29,633	0/0:22,0:22:39.99:0,40,901	0/0:21,0:21:32.60:0,33,698	1/1:15,5:20:32.49:553,32,0	0/0:20,0:20:50.91:0,51,1104	0/0:20,0:16:42.41:0,42,918	0/0:13,0:13:34.53:0,35,1169	0/0:52,0:50:99:0,136,4880	0/0:13,0:13:27.55:0,28,761	0/0:8,0:8:8.90:0,9,319	0/0:34,0:34:81.13:0,81,1986	0/0:17,0:17:9.69:0,10,124	1/1:8,2:10:8.51:296,9,0	1/1:7,0:7:2.06:97,2,0	./.
chr10	16083706	.	GTA	G	1357.83	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=4.657;DP=512;FS=8.151;HRun=0;HaplotypeScore=103.6152;InbreedingCoeff=0.8936;MQ=68.14;MQ0=7;MQRankSum=-5.372;QD=14.60;ReadPosRankSum=-0.103;VQSLOD=3.1356;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:35.55:0,36,347	1/1:5,0:5:11.98:103,12,0	0/0:29,0:21:46.24:0,46,526	0/0:30,0:27:25.73:0,26,510	1/1:12,0:12:20.76:149,21,0	0/0:20,0:20:14.90:0,15,114	0/0:21,0:21:25.43:0,25,197	0/0:31,0:29:59.61:0,60,591	0/0:11,0:11:23.37:0,23,234	1/1:15,0:14:41.91:369,42,0	1/1:2,15:17:8.83:64,9,0	0/0:9,0:9:12:0,12,111	0/0:13,0:13:7.89:0,8,74	0/0:17,0:17:25.96:0,26,187	0/0:23,0:23:39.46:0,39,352	0/0:25,0:25:36.73:0,37,304	1/1:25,0:25:59.72:473,60,0	0/0:21,0:21:44.64:0,45,373	0/0:18,0:16:35.98:0,36,336	0/0:12,0:12:36.01:0,36,385	0/0:46,0:46:99:0,102,1175	0/0:12,0:12:18.69:0,19,157	0/0:11,0:11:10.62:0,11,117	0/0:32,0:32:1.86:0,2,382	0/0:14,0:14:12.65:0,13,103	1/1:10,0:10:27.03:257,27,0	1/1:7,0:7:11.92:93,12,0	1/1:2,0:2:5.98:46,6,0
chr10	16083927	.	T	TTTGG	6998.57	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=8.498;DP=508;FS=25.269;HRun=0;HaplotypeScore=114.1285;InbreedingCoeff=0.9786;MQ=69.48;MQ0=0;MQRankSum=-8.920;QD=59.82;ReadPosRankSum=1.374;VQSLOD=3.9781;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,19:25:62.89:1455,63,0	0/0:7,0:7:18.06:0,18,318	0/0:18,0:15:8.95:0,9,374	0/0:22,0:14:14.89:0,15,286	0/0:26,0:26:70.47:0,70,1227	0/0:23,0:23:60.20:0,60,1088	0/0:10,0:10:27.06:0,27,457	0/0:37,0:37:80.71:0,81,1368	0/0:12,0:12:36.10:0,36,634	0/0:19,0:19:45.15:0,45,839	0/0:14,0:14:33.11:0,33,587	1/1:5,10:15:42.06:849,42,0	0/0:14,0:14:42.11:0,42,764	0/0:13,0:13:36.12:0,36,647	1/1:9,17:26:69.22:1582,69,0	1/1:3,27:30:77.86:1850,78,0	0/0:23,0:23:63.15:0,63,1107	1/1:3,4:7:15.01:333,15,0	0/0:13,0:13:39.11:0,39,619	0/0:26,0:26:75.22:0,75,1380	0/0:13,0:13:30.10:0,30,509	0/0:17,0:17:45.15:0,45,844	0/0:15,0:15:42.11:0,42,722	0/0:13,0:13:33.07:0,33,558	1/1:2,12:14:39.13:930,39,0	0/0:26,0:25:72.22:0,72,1285	0/0:20,0:20:31.15:0,31,861	0/0:10,0:10:21.05:0,21,372
chr10	16083979	.	CT	C	4687.24	PASS	AB=0.872;AC=21;AF=0.375;AN=56;BaseQRankSum=4.076;DP=518;FS=0.000;HRun=4;HaplotypeScore=103.9954;InbreedingCoeff=0.6226;MQ=81.67;MQ0=0;MQRankSum=-3.878;QD=19.69;ReadPosRankSum=2.280;VQSLOD=3.9034;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:20,6:26:47.03:199,0,47	1/1:3,7:10:21.06:251,21,0	0/0:36,1:33:49.27:0,49,641	0/0:33,0:27:35.83:0,36,527	1/1:3,21:24:56.73:662,57,0	0/0:20,0:20:57.15:0,57,725	0/0:17,0:17:51.12:0,51,645	0/0:22,0:22:57.14:0,57,709	0/0:20,0:20:57.13:0,57,755	1/1:3,14:17:45.13:524,45,0	1/1:0,13:13:36.06:414,36,0	0/1:17,1:18:20.39:20,0,50	0/0:17,0:17:48.11:0,48,606	0/0:12,0:12:36.11:0,36,485	0/1:17,5:22:20.82:143,0,21	0/1:20,2:21:20.88:138,0,21	1/1:1,18:19:48.15:575,48,0	0/0:8,0:8:14.17:0,14,105	0/0:14,0:14:36.10:0,36,472	0/0:29,0:29:87.24:0,87,1149	0/0:17,0:17:45.14:0,45,613	0/0:12,0:12:36.12:0,36,502	0/0:15,0:15:45.05:0,45,524	0/0:7,0:7:21.07:0,21,294	0/1:11,2:13:11.54:85,0,12	1/1:2,14:16:42.12:492,42,0	1/1:0,25:25:66.20:790,66,0	1/1:0,13:13:33.10:395,33,0
chr10	16083980	.	T	TTTCCCCC	8091.13	PASS	AB=0.909;AC=15;AF=0.268;AN=56;BaseQRankSum=-0.994;DP=536;FS=5.871;HRun=0;HaplotypeScore=153.4332;InbreedingCoeff=0.5257;MQ=80.91;MQ0=0;MQRankSum=-10.798;QD=42.58;ReadPosRankSum=-0.460;VQSLOD=3.9190;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:15,11:26:69.18:1891,69,0	0/1:8,0:8:14.65:15,0,228	0/0:37,0:33:52.84:0,53,828	0/0:33,0:27:56.05:0,56,804	0/0:24,0:24:0.21:0,0,557	0/0:22,0:22:57.15:0,57,1162	0/0:17,0:17:51.12:0,51,1077	0/0:23,0:23:57.14:0,57,1101	0/0:21,0:21:57.12:0,57,1170	0/1:17,0:17:27.11:27,0,435	0/0:13,0:13:16.36:0,16,372	1/1:5,13:24:20.24:1380,20,0	0/0:17,0:17:48.12:0,48,1009	0/0:12,0:12:36.11:0,36,853	1/1:7,15:27:54.18:1743,54,0	1/1:12,9:20:56.95:1394,57,0	0/0:20,0:20:49.08:0,49,588	0/1:2,6:12:99:462,0,178	0/0:13,0:13:36.10:0,36,694	0/0:30,0:30:87.25:0,87,1913	0/0:16,0:16:45.13:0,45,1017	0/0:12,0:12:36.12:0,36,820	0/0:16,0:16:45.05:0,45,817	0/0:7,0:7:21.07:0,21,539	1/1:4,9:16:36.07:1130,36,0	0/1:14,0:14:43.83:44,0,372	0/1:25,0:25:5.19:5,0,739	0/0:13,0:13:33.11:0,33,448
chr10	16084458	.	T	TTTGG	6643.29	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=2.237;DP=672;FS=42.599;HRun=0;HaplotypeScore=125.0928;InbreedingCoeff=0.9988;MQ=59.30;MQ0=1;MQRankSum=-10.711;QD=45.82;ReadPosRankSum=2.643;VQSLOD=3.4503;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,30:37:51.18:1321,51,0	0/0:10,0:10:27.09:0,27,497	0/0:25,0:24:57.20:0,57,1029	0/0:20,0:17:44.25:0,44,724	0/0:30,0:30:66.23:0,66,1195	0/0:26,0:26:66.23:0,66,1214	0/0:30,0:30:81.27:0,81,1449	0/0:30,0:30:75.25:0,75,1351	0/0:29,0:29:87.28:0,87,1568	0/0:32,0:31:84.29:0,84,1541	0/0:14,0:14:33.11:0,33,607	1/1:2,15:16:33.07:763,33,0	0/0:30,0:30:75.26:0,75,1380	0/0:14,0:14:42.12:0,42,703	1/1:3,20:22:48.16:1264,48,0	1/1:3,26:29:57.20:1502,57,0	0/0:28,0:28:81.28:0,81,1488	1/1:6,14:19:24.26:935,24,0	0/0:15,0:15:33.11:0,33,596	0/0:33,0:33:87.28:0,87,1550	0/0:33,0:33:99:0,99,1808	0/0:18,0:18:45.15:0,45,825	0/0:18,0:18:50.84:0,51,938	0/0:21,0:21:57.20:0,57,1049	1/1:3,14:16:33.11:859,33,0	0/0:23,0:23:69.21:0,69,1225	0/0:38,0:38:99:0,105,1919	0/0:10,0:10:24.08:0,24,442
chr10	16084556	.	T	TG	244.54	PASS	AB=0.540;AC=11;AF=0.196;AN=56;BaseQRankSum=8.507;DP=654;FS=18.081;HRun=0;HaplotypeScore=94.7428;InbreedingCoeff=0.7763;MQ=53.46;MQ0=3;MQRankSum=-7.723;QD=2.66;ReadPosRankSum=0.625;VQSLOD=1.5638;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,5:6:5.42:23,5,0	0/0:8,0:8:24.08:0,24,336	0/0:27,0:14:41.87:0,42,535	0/0:31,0:23:60.19:0,60,817	0/0:17,0:17:48.16:0,48,671	0/0:35,0:35:99:0,99,1365	0/0:21,1:22:60.20:0,60,839	0/0:36,0:35:99:0,105,1441	0/0:28,0:28:78.16:0,78,1090	0/0:33,0:32:96.32:0,96,1329	0/0:15,0:15:45.15:0,45,629	1/1:1,17:12:7.95:32,8,0	0/0:24,0:24:63.18:0,63,845	0/0:23,0:23:60.17:0,60,804	1/1:4,21:17:20.06:175,20,0	0/1:4,23:18:11.37:123,0,11	0/0:28,0:28:81.27:0,81,1132	1/1:0,7:5:5.77:31,6,0	0/0:15,0:14:39.10:0,39,513	0/0:23,0:23:69.23:0,69,964	0/0:46,0:46:99:0,132,1847	0/0:28,0:28:78.25:0,78,1074	0/0:21,0:21:63.20:0,63,864	0/0:16,0:16:45.06:0,45,583	1/1:0,9:5:2.80:13,3,0	0/0:40,0:40:99:0,114,1544	0/0:35,0:35:90.28:0,90,1252	0/0:11,0:11:30.10:0,30,419
chr10	16084583	.	A	AG	10121.34	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-6.795;DP=700;FS=5.164;HRun=1;HaplotypeScore=69.8892;InbreedingCoeff=0.9639;MQ=52.01;MQ0=3;MQRankSum=2.709;QD=31.43;ReadPosRankSum=2.974;VQSLOD=4.4948;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,11:11:6.02:90,6,0	1/1:0,11:11:30.07:425,30,0	0/0:16,0:7:20.87:0,21,220	0/0:18,2:16:36.10:0,36,446	1/1:1,19:20:54.11:780,54,0	0/0:38,0:38:99:0,108,1387	0/0:24,1:25:66.21:0,66,856	0/0:31,0:31:93.29:0,93,1182	0/0:29,0:29:81.15:0,81,1037	1/1:1,33:33:96.30:1386,96,0	1/1:1,21:22:54.18:809,54,0	1/1:1,16:12:18.06:269,18,0	0/0:28,0:28:78.25:0,78,1013	0/0:15,0:15:30.10:0,30,388	1/1:1,27:21:33.11:493,33,0	1/1:2,29:23:9.20:633,9,0	1/1:1,37:38:93.32:1393,93,0	1/1:1,9:8:9.03:120,9,0	0/0:22,0:21:57.18:0,57,738	0/0:27,0:27:78.25:0,78,1012	0/0:50,0:49:99:0,150,1860	0/0:28,0:28:78.17:0,78,991	0/0:23,0:23:69.21:0,69,882	0/0:26,0:26:72.23:0,72,934	1/1:2,9:7:12.04:179,12,0	1/1:1,42:42:99:1838,123,0	1/1:0,36:36:87.29:1303,87,0	1/1:2,7:9:27.09:404,27,0
chr10	16084974	.	GA	G	4405.23	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=16.609;DP=702;FS=2.578;HRun=5;HaplotypeScore=96.3341;InbreedingCoeff=0.9964;MQ=78.50;MQ0=0;MQRankSum=-13.032;QD=28.98;ReadPosRankSum=-0.695;VQSLOD=4.4866;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,34:36:84.16:952,84,0	0/0:11,0:11:30.10:0,30,410	0/0:17,0:17:48.10:0,48,593	0/0:21,0:21:49.04:0,49,642	0/0:18,0:18:36.12:0,36,491	0/0:25,0:25:69.18:0,69,908	0/0:23,0:23:63.21:0,63,862	0/0:47,0:47:99:0,129,1751	0/0:30,0:30:80.84:0,81,1092	0/0:34,0:34:99:0,99,1349	0/0:20,0:20:45.15:0,45,616	1/1:1,19:20:60.16:669,60,0	0/0:24,0:24:72.24:0,72,979	0/0:26,0:26:69.17:0,69,906	1/1:0,26:26:78.22:884,78,0	1/1:6,33:39:26.20:1062,26,0	0/0:26,0:26:78.26:0,78,1067	1/1:2,11:13:36.08:396,36,0	0/0:18,0:18:45.13:0,45,586	0/0:15,0:15:45.15:0,45,616	0/0:36,0:36:99:0,99,1354	0/0:33,0:33:84.28:0,84,1148	0/0:26,0:26:78.24:0,78,1036	0/0:28,0:28:84.28:0,84,1149	1/1:1,17:17:39.11:442,39,0	0/0:32,0:32:96.32:0,96,1309	0/0:35,0:35:99:0,99,1354	0/0:5,0:5:15.05:0,15,205
chr10	16085001	.	TCTC	T	5595.41	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=15.123;DP=732;FS=6.630;HRun=0;HaplotypeScore=121.8514;InbreedingCoeff=0.9989;MQ=77.48;MQ0=1;MQRankSum=-15.349;QD=36.81;ReadPosRankSum=2.999;VQSLOD=5.8014;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,34:40:63.21:1032,63,0	0/0:15,0:15:42.14:0,42,950	0/0:22,0:22:66.18:0,66,1379	0/0:26,0:26:77.85:0,78,1629	0/0:22,0:22:51.18:0,51,1176	0/0:21,0:21:63.20:0,63,1409	0/0:23,0:23:63.22:0,63,1404	0/0:49,0:49:99:0,132,2908	0/0:24,0:24:72.25:0,72,1653	0/0:31,0:31:87.30:0,87,1975	0/0:16,0:16:45.15:0,45,1037	1/1:1,20:21:57.19:957,57,0	0/0:25,0:25:75.26:0,75,1714	0/0:21,0:21:63.22:0,63,1435	1/1:2,25:27:72.23:1182,72,0	1/1:4,31:35:24.02:1350,24,0	0/0:35,0:35:99:0,99,2262	1/1:2,12:14:27.09:460,27,0	0/0:16,0:16:45.15:0,45,1035	0/0:22,0:22:63.22:0,63,1432	0/0:38,0:37:99:0,105,2415	0/0:34,0:34:87.30:0,87,1988	0/0:28,0:28:84.29:0,84,1936	0/0:36,0:36:99:0,105,2403	1/1:1,14:14:36.12:613,36,0	0/0:30,0:30:87.30:0,87,1969	0/0:38,0:38:99:0,111,2534	0/0:8,0:8:24.08:0,24,553
chr10	16085510	.	AGCAGAC	A	5507.75	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=12.701;DP=551;FS=4.785;HRun=0;HaplotypeScore=121.0734;InbreedingCoeff=0.9301;MQ=83.21;MQ0=0;MQRankSum=-13.161;QD=52.96;ReadPosRankSum=-0.992;VQSLOD=4.6994;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:84.29:0,84,2795	1/1:0,7:7:21.07:497,21,0	0/0:16,0:16:45.15:0,45,1550	0/0:19,0:19:54.19:0,54,1788	1/1:0,13:13:27.08:350,27,0	0/0:12,0:12:33.11:0,33,1111	0/0:20,0:20:57.18:0,57,1908	0/0:19,0:19:51.17:0,51,1696	0/0:14,0:14:42.14:0,42,1415	1/1:1,18:19:51.16:1116,51,0	1/1:2,3:5:5.95:90,6,0	0/0:34,0:34:93.32:0,93,3123	0/0:35,0:35:99:0,102,3370	0/0:24,0:24:72.25:0,72,2516	0/0:33,0:33:99:0,99,3551	0/0:23,0:23:69.24:0,69,2428	1/1:2,19:21:45.15:1079,45,0	0/0:14,0:14:0.46:0,0,1258	0/0:13,0:13:36.10:0,36,1155	0/0:13,0:13:36.12:0,36,1114	0/0:52,0:52:99:0,150,4900	0/0:24,0:24:63.22:0,63,1988	0/0:13,0:13:29.75:0,30,1068	0/0:32,0:32:93.32:0,93,3331	0/0:9,0:9:24.08:0,24,775	1/1:2,15:17:45.15:1050,45,0	1/1:0,19:19:51.17:1108,51,0	1/1:0,3:3:9.03:216,9,0
chr10	16085737	.	ATTCACCTGCCACTTAGGGC	A	8497.87	PASS	AB=0.567;AC=11;AF=0.196;AN=56;BaseQRankSum=11.163;DP=520;FS=50.690;HRun=0;HaplotypeScore=256.4794;InbreedingCoeff=0.8756;MQ=84.02;MQ0=0;MQRankSum=-11.370;QD=80.93;ReadPosRankSum=5.385;VQSLOD=2.4776;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,16:29:27.09:1369,27,0	0/0:11,0:11:33.11:0,33,2927	0/0:22,0:22:57.20:0,57,3388	0/0:11,0:14:34:0,34,2018	0/0:13,0:13:39.12:0,39,2568	0/0:14,0:14:39.12:0,39,2417	0/0:26,0:26:72.23:0,72,5262	0/0:33,0:33:84.27:0,84,5061	0/0:23,0:23:69.24:0,69,5245	0/0:10,0:10:27.08:0,27,1904	0/0:5,0:5:12.04:0,12,459	1/1:5,17:22:42.14:2231,42,0	0/0:19,0:19:54.16:0,54,3794	0/0:25,0:25:66.23:0,66,5687	1/1:4,8:12:21.07:1110,21,0	0/1:4,13:17:99:1717,0,237	0/0:38,0:38:99:0,99,7784	1/1:3,8:11:18.06:956,18,0	0/0:20,0:20:57.19:0,57,3695	0/0:16,0:16:42.14:0,42,3229	0/0:38,0:38:99:0,108,7238	0/0:9,0:9:24.08:0,24,1811	0/0:10,0:10:27.09:0,27,2116	0/0:21,0:21:63.22:0,63,5110	1/1:3,11:14:21.07:1115,21,0	0/0:10,0:10:27.09:0,27,2105	0/0:24,0:24:72.25:0,72,5935	0/0:14,0:14:39.10:0,39,2826
chr10	16085934	.	T	TA	2511.05	PASS	AB=0.667;AC=43;AF=0.768;AN=56;BaseQRankSum=-2.199;DP=319;FS=10.658;HRun=1;HaplotypeScore=66.7220;InbreedingCoeff=0.5329;MQ=74.28;MQ0=1;MQRankSum=-1.474;QD=9.00;ReadPosRankSum=0.933;VQSLOD=0.0492;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:2,5:7:0.72:0,1,2	1/1:0,0:2:4.96:23,5,0	0/0:12,0:9:14.39:0,14,143	0/0:15,0:10:11.94:0,12,96	1/1:0,1:5:6.66:22,7,0	1/1:17,0:17:18.31:86,18,0	1/1:22,0:22:37.43:209,37,0	1/1:21,0:21:44.17:277,44,0	1/1:20,0:20:32.83:241,33,0	1/1:1,0:4:8.75:50,9,0	1/1:0,0:3:7:29,7,0	0/0:1,2:3:0:0,0,0	1/1:17,0:17:30.56:149,31,0	1/1:19,0:19:22.68:101,23,0	0/0:0,2:2:0:0,0,0	0/1:3,3:6:9.94:19,0,10	1/1:1,1:7:11.73:56,12,0	1/1:1,6:7:5.98:66,6,0	1/1:15,0:15:34.62:253,35,0	1/1:21,0:21:37.28:221,37,0	1/1:24,1:25:32.86:236,33,0	1/1:14,0:14:25.44:161,25,0	1/1:12,0:12:19.66:142,20,0	1/1:29,0:29:35.99:199,36,0	0/0:1,0:1:0:0,0,0	1/1:1,0:1:3:26,3,0	1/1:2,0:8:12.34:59,12,0	1/1:0,0:4:2.92:17,3,0
chr10	16085956	.	T	TG	2407.34	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-5.561;DP=428;FS=16.825;HRun=4;HaplotypeScore=71.8463;InbreedingCoeff=0.9063;MQ=75.52;MQ0=0;MQRankSum=-3.409;QD=28.66;ReadPosRankSum=-2.791;VQSLOD=1.4303;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:2,11:13:27.09:369,27,0	0/0:2,0:2:6.01:0,6,63	0/0:17,0:15:32.75:0,33,376	0/0:13,0:11:11.32:0,11,154	0/0:12,0:12:33.05:0,33,360	0/0:18,0:18:48.12:0,48,529	0/0:26,0:26:69.16:0,69,757	0/0:16,0:16:36.10:0,36,408	0/0:14,0:14:39.09:0,39,431	0/0:14,0:14:42.11:0,42,467	0/0:6,0:6:12.03:0,12,136	1/1:1,10:11:21.07:287,21,0	0/0:18,0:18:51.14:0,51,574	0/0:23,0:23:69.20:0,69,782	1/1:0,19:19:44.97:615,45,0	1/1:2,12:14:5.10:458,5,0	0/0:24,0:24:54.12:0,54,586	1/1:3,13:16:33.11:451,33,0	0/0:19,1:20:20.84:0,21,491	0/0:18,0:18:48.10:0,48,524	0/0:23,0:23:63.17:0,63,708	0/0:9,0:9:21.04:0,21,238	0/0:12,0:12:32.98:0,33,343	0/0:30,0:30:90.19:0,90,977	1/1:0,11:11:30.10:409,30,0	0/0:2,0:2:6.02:0,6,68	0/0:23,0:23:63.13:0,63,699	0/0:3,0:3:9.02:0,9,94
chr10	16086254	.	T	TTA	4925.01	PASS	AB=1.000;AC=22;AF=0.393;AN=56;BaseQRankSum=-13.418;DP=473;FS=3.435;HRun=0;HaplotypeScore=80.3747;InbreedingCoeff=0.4432;MQ=75.93;MQ0=2;MQRankSum=-1.694;QD=21.99;ReadPosRankSum=-2.632;VQSLOD=4.2492;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,108,1410	1/1:0,5:5:14.97:239,15,0	0/0:17,0:11:22.20:0,22,171	0/0:12,0:9:5.33:0,5,28	1/1:0,12:12:30.06:456,30,0	0/0:32,0:32:1.02:0,1,178	0/0:16,0:16:8.86:0,9,87	0/1:40,0:40:24.91:25,0,139	0/0:12,0:12:0.86:0,1,56	1/1:4,14:21:51.02:757,51,0	1/1:0,18:18:53.94:834,54,0	0/0:12,0:12:36.09:0,36,474	0/1:14,0:14:40.08:40,0,105	0/1:8,0:8:5.08:5,0,40	0/0:20,0:20:54.10:0,54,675	0/0:20,0:20:57.13:0,57,768	1/1:0,18:21:42.14:779,42,0	0/0:15,0:15:45.13:0,45,616	0/1:17,0:17:39.67:40,0,58	0/0:23,0:23:22.50:0,23,125	0/0:7,0:7:12.02:0,12,44	0/1:9,0:9:16.80:56,0,17	0/0:14,0:14:0.24:0,0,56	0/1:18,0:18:34.40:34,0,81	0/0:13,0:13:38.48:0,38,501	1/1:1,21:22:65.17:994,65,0	1/1:0,11:12:17.59:333,18,0	1/1:0,7:7:18.06:333,18,0
chr10	16086872	.	G	GC	3788.64	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=15.143;DP=789;FS=12.838;HRun=3;HaplotypeScore=158.9038;InbreedingCoeff=0.9996;MQ=79.68;MQ0=0;MQRankSum=-7.469;QD=23.98;ReadPosRankSum=0.109;VQSLOD=1.8326;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,120,1013	1/1:4,11:15:35.91:343,36,0	0/0:24,0:24:72.18:0,72,837	0/0:21,0:21:51.13:0,51,591	1/1:5,17:22:51.02:483,51,0	0/0:19,0:19:38.86:0,39,468	0/0:33,0:33:90.27:0,90,1075	0/0:26,0:26:63.18:0,63,747	0/0:21,0:21:63.19:0,63,756	1/1:2,15:18:51.02:498,51,0	1/1:3,15:18:38.72:343,39,0	0/0:37,0:37:99:0,108,986	0/0:29,0:29:84.26:0,84,1007	0/0:33,0:33:99:0,99,1170	0/0:32,0:32:77.72:0,78,709	0/0:36,0:36:99:0,108,1026	1/1:3,21:24:60.11:620,60,0	0/0:38,0:38:99:0,102,940	0/0:31,0:31:87.27:0,87,1043	0/0:20,0:20:54.16:0,54,647	0/0:78,0:78:99:0,229,2715	0/0:31,0:31:93.27:0,93,1102	0/0:11,0:11:33.09:0,33,384	0/0:37,0:37:99:0,102,1222	0/0:22,0:22:55.39:0,55,466	1/1:6,27:33:87.11:860,87,0	1/1:6,11:17:44.74:405,45,0	1/1:3,8:11:24.04:236,24,0
chr10	16086880	.	C	CT	14320.49	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=13.371;DP=787;FS=1.840;HRun=0;HaplotypeScore=119.9572;InbreedingCoeff=0.9997;MQ=80.31;MQ0=0;MQRankSum=-2.727;QD=37.78;ReadPosRankSum=3.682;VQSLOD=4.5220;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,49:50:99:2156,135,0	1/1:1,11:12:33.10:404,33,0	0/0:25,0:25:74.84:0,75,925	0/0:19,0:19:53.68:0,54,612	1/1:1,21:22:48.07:569,48,0	0/0:17,0:17:45.15:0,45,627	0/0:35,0:35:99:0,105,1399	0/0:23,0:23:66.22:0,66,919	0/0:22,0:22:63.21:0,63,877	1/1:1,18:19:54.13:660,54,0	1/1:1,17:18:39.11:475,39,0	1/1:0,41:41:99:1773,111,0	0/0:27,0:27:81.26:0,81,1112	0/0:37,0:37:99:0,105,1418	1/1:1,32:33:81.28:1294,81,0	1/1:0,37:37:99:1726,108,0	1/1:4,19:23:69.18:853,69,0	1/1:1,43:44:99:1591,102,0	0/0:29,0:29:87.28:0,87,1197	0/0:20,0:20:60.14:0,60,793	0/0:79,0:79:99:0,232,3127	0/0:31,0:31:90.26:0,90,1234	0/0:11,0:11:26.91:0,27,332	0/0:33,0:33:99:0,99,1339	1/1:1,23:24:60.20:950,60,0	1/1:3,28:31:87.26:1075,87,0	1/1:1,15:16:42.11:487,42,0	1/1:1,8:9:27.04:307,27,0
chr10	16087314	.	GGA	G	5600.52	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=16.419;DP=714;FS=8.345;HRun=0;HaplotypeScore=98.8886;InbreedingCoeff=0.9997;MQ=90.84;MQ0=0;MQRankSum=-5.145;QD=33.54;ReadPosRankSum=5.094;VQSLOD=6.8090;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,40:42:90.26:1257,90,0	0/0:10,0:10:30.03:0,30,473	0/0:31,0:32:84.21:0,84,1419	0/0:27,0:27:75.54:0,76,1312	0/0:25,0:25:75.26:0,75,1367	0/0:31,0:31:90.31:0,90,1649	0/0:39,0:39:99:0,108,1912	0/0:39,0:39:99:0,105,1804	0/0:26,0:26:72.25:0,72,1320	0/0:17,0:17:45.15:0,45,824	0/0:15,0:15:39.06:0,39,637	1/1:4,16:20:42.14:600,42,0	0/0:29,0:29:84.29:0,84,1539	0/0:21,0:21:60.21:0,60,1089	1/1:3,24:27:69.14:934,69,0	1/1:2,30:32:78.26:1110,78,0	0/0:45,0:45:99:0,132,2346	1/1:0,25:25:72.20:993,72,0	0/0:33,0:33:96.33:0,96,1746	0/0:12,0:12:30.10:0,30,544	0/0:31,0:31:93.31:0,93,1674	0/0:17,0:17:48.13:0,48,825	0/0:14,0:14:39.13:0,39,710	0/0:30,0:30:87.30:0,87,1585	1/1:3,18:21:51.17:707,51,0	0/0:21,0:21:60.17:0,60,1052	0/0:22,0:22:63.22:0,63,1154	0/0:11,0:11:33.11:0,33,585
chr10	16087621	.	TG	T	10270.55	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=14.849;DP=742;FS=1.564;HRun=4;HaplotypeScore=74.7513;InbreedingCoeff=0.9982;MQ=88.29;MQ0=0;MQRankSum=-0.057;QD=31.22;ReadPosRankSum=2.258;VQSLOD=5.4710;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,135,1836	0/0:6,0:6:18.06:0,18,252	0/0:20,0:20:51.13:0,51,656	0/0:32,0:32:75.57:0,76,988	0/0:21,0:21:60.20:0,60,836	1/1:2,18:20:41.19:632,41,0	1/1:0,30:30:69.21:827,69,0	1/1:1,23:24:69.19:806,69,0	1/1:2,27:29:66.20:792,66,0	0/0:26,0:26:72.18:0,72,955	0/0:8,0:8:24.07:0,24,318	0/0:31,0:31:84.25:0,84,1127	1/1:0,25:25:66.06:791,66,0	1/1:1,38:39:99:1259,105,0	0/0:45,0:45:99:0,135,1807	0/0:39,0:39:99:0,114,1574	0/0:31,0:31:93.28:0,93,1281	0/0:30,0:30:78.26:0,78,1090	1/1:1,21:22:60.15:696,60,0	1/1:1,12:13:36.11:432,36,0	1/1:2,49:51:99:1655,138,0	1/1:2,17:19:51.14:599,51,0	1/1:1,11:12:33.10:395,33,0	1/1:2,43:45:99:1387,117,0	0/0:13,0:13:36.12:0,36,504	0/0:25,0:25:69.23:0,69,964	0/0:29,0:28:87.27:0,87,1199	0/0:9,0:9:24.08:0,24,335
chr10	16089176	.	GTCT	G	3038.93	PASS	AB=0.681;AC=16;AF=0.286;AN=56;BaseQRankSum=10.535;DP=658;FS=2.911;HRun=0;HaplotypeScore=215.0782;InbreedingCoeff=0.7383;MQ=76.75;MQ0=0;MQRankSum=-13.419;QD=18.64;ReadPosRankSum=4.527;VQSLOD=3.6631;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,129,2921	1/1:2,11:13:38.99:410,39,0	0/0:31,0:31:57.94:0,58,1946	0/0:40,0:40:85.51:0,86,2527	1/1:1,12:13:25.23:237,25,0	0/0:19,0:19:14.90:0,15,223	0/0:25,0:25:12.62:0,13,122	0/0:31,0:31:25.67:0,26,840	0/0:28,0:28:12.70:0,13,91	1/1:3,19:22:13.51:545,14,0	1/1:0,6:6:12.03:126,12,0	0/0:27,0:27:78.27:0,78,1791	0/0:18,0:18:3.23:0,3,67	0/0:22,0:22:11.64:0,12,255	0/0:40,0:40:99:0,120,2763	0/0:30,0:30:90.31:0,90,2038	0/1:9,7:16:39.30:96,0,39	0/0:14,1:15:12.51:0,13,936	0/0:21,0:22:39.87:0,40,586	0/0:11,0:11:10.07:0,10,117	0/0:23,0:23:25.26:0,25,281	0/0:22,0:22:14.58:0,15,86	0/0:17,0:17:10.55:0,11,142	1/1:24,0:24:7.23:29,7,0	0/0:29,0:29:84.29:0,84,1936	1/1:4,25:29:30.49:815,30,0	1/1:5,25:30:57.02:817,57,0	0/1:5,5:10:34.89:158,0,35
chr10	16089177	.	T	TC	2082.62	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=5.545;DP=661;FS=2.717;HRun=1;HaplotypeScore=199.5748;InbreedingCoeff=0.9897;MQ=76.93;MQ0=0;MQRankSum=-12.119;QD=15.20;ReadPosRankSum=3.013;VQSLOD=3.9806;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,129,1660	1/1:11,2:13:36.17:229,36,0	0/0:32,0:32:46.88:0,47,1072	0/0:40,0:40:99:0,115,1428	1/1:13,0:13:24.65:159,25,0	0/0:18,0:18:42.08:0,42,433	0/0:25,0:25:51.08:0,51,510	0/0:30,0:30:83.87:0,84,918	0/0:28,0:28:78.11:0,78,749	1/1:19,2:21:59.49:367,59,0	1/1:6,0:6:11.10:62,11,0	0/0:27,0:27:78.25:0,78,1013	0/0:18,0:18:48.05:0,48,451	0/0:22,0:22:48.06:0,48,483	0/0:40,0:40:99:0,120,1558	0/0:30,0:30:90.29:0,90,1168	1/1:7,8:15:26.60:290,27,0	0/0:15,0:15:31.91:0,32,532	0/0:23,0:23:57.13:0,57,631	0/0:13,0:13:27:0,27,252	0/0:24,0:24:35.92:0,36,344	0/0:23,0:23:53.71:0,54,445	0/0:17,0:17:39.02:0,39,377	0/0:23,0:23:14.88:0,15,117	0/0:30,0:30:84.27:0,84,1090	1/1:25,4:29:82.92:519,83,0	1/1:25,5:30:80.90:462,81,0	1/1:5,5:10:23.10:201,23,0
chr10	16089179	.	TTCCTGTCCA	T	18831.02	PASS	AB=1.000;AC=41;AF=0.732;AN=56;BaseQRankSum=15.905;DP=664;FS=2.799;HRun=0;HaplotypeScore=235.8969;InbreedingCoeff=0.8928;MQ=78.23;MQ0=0;MQRankSum=-17.937;QD=45.16;ReadPosRankSum=1.656;VQSLOD=4.4079;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,129,5516	1/1:15,0:15:36.82:686,37,0	0/0:34,0:34:90.30:0,90,3768	0/0:41,0:41:99:0,110,4552	1/1:13,0:13:21.07:388,21,0	1/1:3,15:18:30.10:894,30,0	1/1:2,24:26:48.16:1367,48,0	1/1:8,20:28:63.18:1529,63,0	1/1:2,27:29:75.26:2232,75,0	1/1:21,0:21:54.19:1037,54,0	1/1:6,0:6:12.04:224,12,0	0/0:27,0:27:78.25:0,78,3439	1/1:1,18:19:48.16:1383,48,0	1/1:4,18:22:39.09:1092,39,0	0/0:40,0:40:99:0,114,5336	0/0:31,0:31:84.29:0,84,3973	1/1:16,0:16:12.43:158,12,0	0/1:15,0:15:18.24:18,0,1583	1/1:9,13:22:39.12:960,39,0	1/1:3,10:13:21.03:556,21,0	1/1:6,17:23:15.05:416,15,0	1/1:2,21:23:42.10:1182,42,0	1/1:2,15:17:36.08:952,36,0	1/1:4,19:23:15.52:447,16,0	0/0:29,0:29:87.30:0,87,3968	1/1:29,0:29:78.27:1501,78,0	1/1:30,0:30:78.27:1470,78,0	1/1:9,0:9:18.06:336,18,0
chr10	16089183	.	TGTCCA	T	9832.76	PASS	AB=0.859;AC=36;AF=0.643;AN=56;BaseQRankSum=18.997;DP=656;FS=2.195;HRun=0;HaplotypeScore=216.9917;InbreedingCoeff=0.5797;MQ=80.93;MQ0=0;MQRankSum=-18.834;QD=24.28;ReadPosRankSum=5.412;VQSLOD=4.1867;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,135,4186	1/1:5,11:16:37.68:634,38,0	0/0:37,0:37:99:0,111,3200	0/0:41,0:42:99:0,125,3679	1/1:0,12:12:21.07:344,21,0	1/1:17,0:17:30.09:349,30,0	1/1:25,0:25:45.59:497,46,0	0/1:26,0:26:99:435,0,209	1/1:28,0:28:75.22:870,75,0	1/1:4,19:23:23.68:887,24,0	0/1:2,6:8:0.18:184,0,0	0/0:27,0:27:81.26:0,81,2555	1/1:19,0:19:6.80:501,7,0	1/1:20,0:20:17.09:414,17,0	0/0:40,0:40:99:0,120,3910	0/0:30,0:30:90.31:0,90,2911	0/1:9,7:16:8.31:139,0,8	0/1:14,1:15:5.95:6,0,1207	0/1:18,1:19:99:324,0,105	1/1:12,0:12:21.02:229,21,0	0/1:21,0:21:7.39:127,0,7	1/1:23,0:23:41.82:474,42,0	1/1:15,0:16:19.46:356,19,0	1/1:22,0:22:15.04:175,15,0	0/0:30,0:30:90.31:0,90,2939	1/1:4,25:29:56.58:1310,57,0	1/1:5,25:30:66.01:1290,66,0	1/1:3,5:8:9.68:286,10,0
chr10	16091528	.	T	TC	1215.99	PASS	AB=1.000;AC=21;AF=0.420;AN=50;BaseQRankSum=-7.025;DP=134;FS=8.016;HRun=3;HaplotypeScore=17.1591;InbreedingCoeff=0.6710;MQ=85.18;MQ0=2;MQRankSum=-2.237;QD=22.94;ReadPosRankSum=-0.781;VQSLOD=1.8626;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:6,0:6:7.07:7,0,99	0/0:3,0:3:6.02:0,6,73	0/0:11,0:4:11.07:0,11,116	0/0:13,0:14:32.05:0,32,351	./.	1/1:0,3:3:9.03:129,9,0	1/1:6,2:8:15.05:206,15,0	1/1:3,6:9:18.06:257,18,0	1/1:0,2:2:6.02:86,6,0	0/0:1,0:1:3.01:0,3,37	0/0:2,0:2:3.01:0,3,37	0/0:4,0:4:9.02:0,9,109	./.	1/1:4,4:8:12.04:172,12,0	0/0:5,0:5:9.03:0,9,111	0/0:3,0:3:9.03:0,9,112	0/0:6,0:6:15.05:0,15,185	0/0:3,0:4:9.01:0,9,98	1/1:0,5:5:15.04:196,15,0	1/1:1,2:3:3.01:43,3,0	1/1:0,5:5:12.04:172,12,0	1/1:0,3:3:6.02:86,6,0	1/1:0,1:1:3.01:43,3,0	./.	0/0:7,0:7:15.05:0,15,182	0/0:6,0:6:15.05:0,15,186	0/0:8,0:8:24.08:0,24,297	0/0:1,0:1:3.01:0,3,37
chr10	16091605	.	C	CAA	3668.06	PASS	AB=1.000;AC=39;AF=0.722;AN=54;BaseQRankSum=-5.984;DP=243;FS=35.123;HRun=12;HaplotypeScore=54.1596;InbreedingCoeff=0.7683;MQ=77.68;MQ0=0;MQRankSum=-3.934;QD=21.08;ReadPosRankSum=-2.429;VQSLOD=-0.1217;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:27.56:0,28,98	./.	0/0:7,0:8:2.70:0,3,12	0/1:14,0:11:18.50:20,0,18	1/1:1,10:14:30.10:407,30,0	1/1:1,7:10:21.02:249,21,0	1/1:4,6:13:14.66:144,15,0	1/1:10,7:23:35.41:466,35,0	1/1:2,5:9:15.04:183,15,0	1/1:1,3:6:15.02:177,15,0	1/1:0,5:6:17.88:183,18,0	0/0:7,0:7:14.68:0,15,52	1/1:1,3:4:3.01:42,3,0	1/1:3,6:10:24.04:289,24,0	0/0:7,0:7:18.47:0,18,85	0/0:8,0:8:20.21:0,20,73	1/1:1,3:4:12.04:168,12,0	0/0:16,0:16:34.97:0,35,124	1/1:2,1:6:14.99:174,15,0	1/1:5,1:13:21.41:208,21,0	1/1:1,4:8:15.04:197,15,0	1/1:3,2:5:8.96:102,9,0	1/1:2,1:4:9.01:96,9,0	1/1:1,7:8:12.04:168,12,0	0/0:7,0:7:15.66:0,16,67	1/1:4,3:11:23.97:219,24,0	1/1:3,0:3:9.01:94,9,0	1/1:0,3:3:6.02:84,6,0
chr10	16091616	.	AAC	A	892.35	PASS	AB=0.994;AC=21;AF=0.375;AN=56;BaseQRankSum=-5.615;DP=279;FS=30.025;HRun=0;HaplotypeScore=60.9784;InbreedingCoeff=0.0005;MQ=73.11;MQ0=0;MQRankSum=0.518;QD=4.70;ReadPosRankSum=0.392;VQSLOD=0.9111;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:20:0.67:145,1,0	0/0:1,0:1:2.99:0,3,24	0/0:11,0:9:20.82:0,21,161	0/0:10,0:6:15.30:0,15,129	0/0:15,0:15:45.04:0,45,497	0/1:12,0:12:49.24:55,0,49	0/1:11,0:11:8.77:9,0,47	0/1:22,0:22:82.17:82,0,109	0/0:9,0:9:13.81:0,14,71	0/0:10,0:10:30.03:0,30,315	0/0:7,0:7:19.75:0,20,177	0/1:9,0:9:3.77:69,0,4	0/1:7,0:7:10.55:66,0,11	0/1:11,0:11:3.95:4,0,70	0/1:10,1:11:18.69:123,0,19	1/1:10,1:11:23.42:139,23,0	0/0:6,0:6:17.83:0,18,167	1/1:16,0:16:17.89:89,18,0	0/1:7,0:7:21.09:38,0,21	0/1:14,0:14:28.16:28,0,67	0/1:9,0:9:25.41:31,0,25	0/1:5,0:5:14.03:19,0,14	0/1:7,0:7:18.44:34,0,18	0/1:10,0:10:8.86:14,0,9	1/1:6,2:8:15.40:117,15,0	0/0:13,0:13:36.90:0,37,385	0/0:4,0:4:11.88:0,12,115	0/0:3,0:3:6.02:0,6,75
chr10	16091617	.	AC	A	2975.28	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-1.534;DP=264;FS=9.826;HRun=3;HaplotypeScore=47.1050;InbreedingCoeff=0.8790;MQ=76.00;MQ0=0;MQRankSum=-2.038;QD=16.08;ReadPosRankSum=2.710;VQSLOD=2.2319;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,10:18:46.70:507,47,0	0/0:1,0:1:2.99:0,3,24	0/0:11,0:9:20.55:0,21,157	0/0:11,0:7:13.48:0,13,119	0/0:15,0:15:43.91:0,44,352	1/1:12,0:12:11.42:113,11,0	1/1:8,0:8:15.22:72,15,0	1/1:19,0:19:33.36:227,33,0	1/1:7,0:7:9.03:40,9,0	0/0:9,0:9:26.94:0,27,223	0/0:6,0:6:11.96:0,12,93	1/1:3,6:9:24.05:274,24,0	1/1:6,0:6:11.59:89,12,0	1/1:10,0:10:15.31:74,15,0	1/1:7,4:11:25.67:272,26,0	1/1:5,7:12:33.01:354,33,0	0/0:6,0:6:14.89:0,15,110	1/1:3,13:16:43.78:523,44,0	1/1:7,0:7:12.15:76,12,0	1/1:11,0:11:17.18:94,17,0	1/1:9,0:9:7.03:77,7,0	1/1:5,0:5:8.28:48,8,0	1/1:7,0:7:13.88:87,14,0	1/1:10,0:10:19.10:112,19,0	1/1:3,5:8:14.90:146,15,0	0/0:13,0:13:35.83:0,36,290	0/0:4,0:4:8.98:0,9,72	0/0:3,0:3:5.98:0,6,47
chr10	16091620	.	CT	C	304.80	PASS	AB=0.975;AC=10;AF=0.179;AN=56;BaseQRankSum=-0.390;DP=259;FS=8.671;HRun=1;HaplotypeScore=54.5016;InbreedingCoeff=0.3269;MQ=77.40;MQ0=0;MQRankSum=1.634;QD=3.67;ReadPosRankSum=2.717;VQSLOD=-0.0701;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:18:6.93:104,7,0	0/0:2,0:2:6.01:0,6,70	0/0:12,0:10:24.07:0,24,338	0/0:10,0:7:11.39:0,11,190	0/0:15,0:15:38.75:0,39,551	0/0:10,1:11:8.42:0,8,73	0/0:6,0:6:12.57:0,13,49	0/0:18,1:19:29.06:0,29,177	0/0:5,0:5:9.97:0,10,39	0/0:10,0:10:30.10:0,30,449	0/0:4,2:6:11.86:0,12,158	1/1:8,0:8:19.09:91,19,0	0/0:4,0:4:0.23:0,0,6	0/0:7,1:8:9.57:0,10,40	0/1:10,0:10:15.44:36,0,15	0/1:14,0:14:39.02:54,0,39	0/0:6,0:6:18.04:0,18,230	1/1:16,0:16:9.11:133,9,0	0/0:10,0:10:21.26:0,21,141	0/0:9,0:9:19.50:0,20,108	0/1:8,1:9:14.80:15,0,35	0/0:4,2:6:1.83:0,2,23	0/0:6,0:6:2.26:0,2,13	0/0:10,0:10:15:0,15,70	0/1:8,0:8:19.34:19,0,27	0/0:14,0:14:39.05:0,39,502	0/0:4,0:4:12.03:0,12,155	0/0:3,0:3:6.02:0,6,88
chr10	16093371	.	T	TGCA	691.65	PASS	AB=0.952;AC=10;AF=0.208;AN=48;BaseQRankSum=3.464;DP=753;FS=1.697;HRun=0;HaplotypeScore=102.8519;InbreedingCoeff=-0.0752;MQ=42.81;MQ0=95;MQRankSum=1.039;QD=1.37;ReadPosRankSum=6.030;VQSLOD=1.4845;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	0/0:5,0:5:9.03:0,9,132	0/0:31,0:1:3.01:0,3,31	./.	./.	0/0:12,0:7:6.02:0,6,88	0/1:94,0:78:45.72:46,0,1357	0/0:16,0:10:15.05:0,15,219	0/1:54,0:48:31.34:31,0,613	0/0:10,0:8:24.08:0,24,351	0/0:1,0:1:3.01:0,3,44	0/1:17,3:14:0:0,0,0	0/1:37,0:32:54.45:54,0,411	0/1:72,0:64:99:134,0,599	0/0:20,1:13:2.89:0,3,44	1/1:23,3:21:21.01:285,21,0	0/0:16,14:27:21.07:0,21,307	0/0:4,5:6:2.97:0,3,20	0/0:18,0:9:15.05:0,15,218	0/0:9,0:7:12.93:0,13,184	0/1:122,0:88:76.48:76,0,435	0/0:4,0:3:3.01:0,3,46	0/0:7,0:6:6.02:0,6,88	0/1:66,0:56:99:99,0,784	0/0:12,0:3:3.01:0,3,44	0/0:13,0:6:12.04:0,12,176	0/1:10,4:14:95.67:96,0,280	./.
chr10	16093411	.	TGCA	T	311.09	PASS	AB=0.966;AC=8;AF=0.190;AN=42;BaseQRankSum=4.774;DP=690;FS=20.305;HRun=0;HaplotypeScore=87.3110;InbreedingCoeff=-0.1096;MQ=40.86;MQ0=94;MQRankSum=3.875;QD=0.98;ReadPosRankSum=1.527;VQSLOD=0.3438;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	0/0:8,0:4:3.01:0,3,62	./.	./.	0/0:6,0:2:3.01:0,3,62	./.	0/1:66,3:59:99:99,0,1963	0/0:23,0:14:29.57:0,30,432	0/1:41,3:38:59.49:59,0,1164	0/0:22,0:13:18.06:0,18,372	./.	0/0:5,0:4:2.67:0,3,55	0/1:31,1:28:37.20:37,0,873	0/0:74,0:61:99:0,129,2620	./.	0/0:8,0:5:6.02:0,6,113	0/1:20,1:19:67.45:76,0,67	0/0:3,0:1:3.01:0,3,60	0/0:19,0:6:14.88:0,15,258	1/1:8,0:8:6.02:85,6,0	0/1:128,3:80:41.96:42,0,779	0/1:11,0:7:32.51:33,0,67	0/0:8,0:5:6:0,6,86	0/0:62,1:57:19.89:0,20,1960	./.	0/0:29,0:7:18.06:0,18,370	0/0:12,0:12:11.88:0,12,165	0/0:5,0:5:0.99:0,1,117
chr10	16093500	.	T	TGCA	264.70	PASS	AB=0.813;AC=8;AF=0.167;AN=48;BaseQRankSum=2.818;DP=649;FS=9.209;HRun=0;HaplotypeScore=81.6962;InbreedingCoeff=0.4691;MQ=43.66;MQ0=61;MQRankSum=0.377;QD=4.73;ReadPosRankSum=-2.326;VQSLOD=0.2401;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:3,0:3:9:0,9,109	./.	0/1:29,0:3:16.08:27,0,16	0/0:12,0:8:6.02:0,6,88	0/0:15,0:14:27.09:0,27,395	0/0:59,0:57:87.74:0,88,1233	0/0:27,0:15:42.14:0,42,610	0/0:36,0:31:42.14:0,42,615	0/0:14,0:11:21.07:0,21,307	0/0:5,0:3:9.03:0,9,131	0/1:4,6:7:11.97:114,0,12	0/0:34,0:32:51.17:0,51,747	0/0:53,0:46:83.24:0,83,1125	1/1:8,1:8:9.02:136,9,0	./.	0/0:35,0:30:72.18:0,72,992	1/1:0,4:4:3:62,3,0	0/0:19,0:13:33.07:0,33,451	0/0:10,0:8:8.86:0,9,102	0/0:121,0:88:77.46:0,77,1116	0/0:9,0:7:15.05:0,15,219	./.	0/0:54,0:50:96.23:0,96,1330	1/1:2,0:1:3.01:50,3,0	0/0:22,0:13:18.06:0,18,251	0/0:13,0:13:33.11:0,33,481	0/0:3,0:3:3.01:0,3,44
chr10	16093540	.	TGCA	T	4471.10	PASS	AB=0.881;AC=20;AF=0.435;AN=46;BaseQRankSum=-1.542;DP=616;FS=0.000;HRun=0;HaplotypeScore=73.2129;InbreedingCoeff=0.6948;MQ=46.03;MQ0=73;MQRankSum=3.213;QD=11.74;ReadPosRankSum=1.556;VQSLOD=4.3646;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:10:12.04:0,12,232	0/0:7,0:6:12.04:0,12,247	./.	./.	0/0:7,0:5:3.01:0,3,62	1/1:11,3:9:9.03:131,9,0	0/1:25,8:27:3.89:373,0,4	1/1:11,0:6:0.89:2,1,0	1/1:14,29:35:21.77:469,22,0	0/0:30,0:17:27.09:0,27,525	./.	0/1:21,1:20:4.79:5,0,703	1/1:6,15:19:12.72:337,13,0	1/1:16,45:54:23.10:780,23,0	0/0:6,0:6:15.05:0,15,310	0/0:16,0:11:24.08:0,24,495	0/0:29,0:24:51.13:0,51,1011	0/0:11,0:11:24.03:0,24,494	1/1:12,0:6:3.01:40,3,0	1/1:6,0:3:2.99:24,3,0	1/1:68,29:72:33.67:629,34,0	./.	./.	1/1:27,34:58:94.78:1682,95,0	0/0:6,0:6:12.04:0,12,232	0/0:20,0:8:15.05:0,15,309	0/0:18,0:17:42.08:0,42,765	0/0:6,0:5:6.02:0,6,124
chr10	16094700	.	T	TA	6197.73	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=17.331;DP=582;FS=17.175;HRun=0;HaplotypeScore=94.3230;InbreedingCoeff=0.9623;MQ=78.02;MQ0=0;MQRankSum=-5.136;QD=24.02;ReadPosRankSum=1.884;VQSLOD=4.4640;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:81.24:0,81,1096	0/0:8,0:8:24.07:0,24,321	0/0:17,0:17:33.07:0,33,529	0/0:12,0:12:12.68:0,13,344	0/0:30,0:30:90.29:0,90,1243	1/1:2,25:27:65.11:720,65,0	1/1:5,17:22:38.66:546,39,0	1/1:8,23:31:64.54:752,65,0	1/1:5,14:19:16.14:387,16,0	0/0:20,0:19:57.19:0,57,796	0/0:18,0:18:54.16:0,54,724	0/0:29,0:29:86.50:0,87,1181	1/1:1,13:14:28.78:308,29,0	1/1:7,21:28:21.84:650,22,0	0/0:23,0:23:66.21:0,66,906	0/0:12,0:12:36.11:0,36,488	0/0:21,0:21:57.15:0,57,759	0/0:25,0:25:75.25:0,75,1049	1/1:3,16:19:23.65:493,24,0	1/1:2,20:22:48.88:525,49,0	1/1:1,15:16:39.98:420,40,0	1/1:3,14:17:43.64:467,44,0	1/1:3,13:16:2.83:387,3,0	1/1:8,19:27:10.63:542,11,0	0/0:18,0:18:54.16:0,54,723	0/0:24,0:24:69.22:0,69,943	0/0:21,0:21:63.21:0,63,880	0/0:18,0:18:54.14:0,54,717
chr10	16097615	.	AGAGCAGCAGGTTCTTACCCACT	A	15484.54	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=13.021;DP=529;FS=0.000;HRun=0;HaplotypeScore=329.7390;InbreedingCoeff=0.9336;MQ=68.17;MQ0=0;MQRankSum=-13.435;QD=95.00;ReadPosRankSum=2.374;VQSLOD=3.6238;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,148,12968	0/0:8,0:8:21.07:0,21,1969	0/0:19,0:19:51.17:0,51,3354	0/0:34,0:34:93.28:0,93,6629	0/0:13,0:13:39.13:0,39,3534	1/1:6,10:16:33.11:1847,33,0	1/1:12,19:31:63.22:3266,63,0	1/1:9,2:11:6.02:364,6,0	1/1:1,5:6:15.05:909,15,0	0/0:15,0:15:42.14:0,42,3801	0/0:10,0:10:30.09:0,30,2421	0/0:33,0:33:96.30:0,96,8794	1/1:8,15:23:51.17:2836,51,0	1/1:7,7:14:27.09:1635,27,0	0/0:31,0:31:93.32:0,93,9034	0/0:21,0:21:60.21:0,60,5650	0/0:31,0:31:90.31:0,90,8268	0/0:22,0:22:60.21:0,60,5569	1/1:6,4:10:12.04:727,12,0	1/1:2,2:4:6.02:363,6,0	1/1:15,4:19:6.47:365,6,0	1/1:2,8:10:18.06:1089,18,0	1/1:0,2:2:6.02:364,6,0	1/1:5,12:17:29.38:1720,29,0	0/0:15,0:15:42.14:0,42,4282	0/0:25,0:25:63.22:0,63,5962	0/0:28,0:28:81.28:0,81,8173	0/0:11,0:11:33.11:0,33,2883
chr10	16097672	.	G	GTCCT	16616.36	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-1.850;DP=687;FS=26.430;HRun=0;HaplotypeScore=158.9495;InbreedingCoeff=0.9351;MQ=66.69;MQ0=0;MQRankSum=-14.645;QD=61.54;ReadPosRankSum=-0.492;VQSLOD=3.7669;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,160,3265	0/0:8,0:8:21.07:0,21,439	0/0:12,0:12:3.47:0,3,137	0/0:9,0:9:9:0,9,147	0/0:21,0:21:60.21:0,60,1239	1/1:0,12:12:36.12:1040,36,0	1/1:4,20:27:57.19:1596,57,0	1/1:4,20:27:78.25:2102,78,0	1/1:1,17:21:48.16:1384,48,0	0/0:21,0:21:63.19:0,63,1237	0/0:13,0:13:36.08:0,36,688	0/0:47,0:47:99:0,138,2844	1/1:1,27:28:63.22:1819,63,0	1/1:2,22:25:72.25:2028,72,0	0/0:34,0:34:99:0,99,2039	0/0:28,1:29:0.65:0,1,1651	0/0:49,0:49:99:0,144,2794	0/0:27,0:27:81.26:0,81,1635	1/1:3,13:17:45.15:1252,45,0	1/1:5,13:19:36.12:1040,36,0	1/1:1,22:25:42.14:1214,42,0	1/1:1,24:25:36.12:988,36,0	1/1:2,15:18:27.09:779,27,0	1/1:1,23:26:51.17:1373,51,0	0/0:23,0:23:69.22:0,69,1358	0/0:30,0:30:84.26:0,84,1620	0/0:31,0:30:93.30:0,93,1879	0/0:9,0:9:27.09:0,27,566
chr10	16098136	.	CTGTGTGTGTGTG	C	2036.74	PASS	AB=0.959;AC=18;AF=0.321;AN=56;BaseQRankSum=1.476;DP=965;FS=12.188;HRun=0;HaplotypeScore=325.4633;InbreedingCoeff=0.3181;MQ=47.95;MQ0=25;MQRankSum=-3.254;QD=6.55;ReadPosRankSum=-1.093;VQSLOD=0.8567;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:36:14.42:0,14,415	1/1:6,0:7:3.90:85,4,0	0/0:28,0:23:11.86:0,12,178	0/0:30,0:22:18.06:0,18,283	1/1:14,3:19:6.02:135,6,0	0/0:20,0:19:11.80:0,12,113	0/1:47,0:46:97.40:97,0,265	0/0:54,0:39:29.31:0,29,431	0/1:43,0:43:12.45:12,0,624	0/1:35,3:36:99:604,0,108	1/1:10,3:15:11.86:112,12,0	0/0:40,0:35:31.61:0,32,715	0/0:29,0:28:13.90:0,14,240	0/0:41,0:38:4.90:0,5,283	0/0:46,0:44:30.24:0,30,821	0/0:42,0:38:51.66:0,52,1245	0/1:22,2:25:99:402,0,108	0/1:32,0:33:22.94:23,0,672	0/0:42,0:29:13.16:0,13,362	0/0:19,0:19:6.02:0,6,95	0/0:120,0:111:19.75:0,20,407	0/0:29,0:27:1.20:0,1,3	1/1:13,0:13:0.67:1,1,0	0/0:42,0:42:8.57:0,9,243	0/0:25,0:25:3.28:0,3,345	0/1:26,0:26:99:119,0,140	1/1:16,3:20:16.28:451,16,0	1/1:14,0:15:12.01:164,12,0
chr10	16098150	.	G	GCC	79.57	PASS	AB=0.987;AC=8;AF=0.143;AN=56;BaseQRankSum=6.954;DP=939;FS=5.716;HRun=0;HaplotypeScore=249.5129;InbreedingCoeff=-0.0310;MQ=37.94;MQ0=39;MQRankSum=-7.782;QD=0.40;ReadPosRankSum=-0.782;VQSLOD=1.9949;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:36:12.98:0,13,363	0/1:6,0:5:22.75:23,0,40	0/0:18,0:13:29.61:0,30,455	0/0:22,0:13:36.12:0,36,564	0/0:22,0:21:33.05:0,33,431	0/1:19,0:17:15.33:15,0,50	0/1:45,3:43:37.27:37,0,364	0/1:51,1:33:68.39:68,0,665	0/0:46,0:43:22.21:0,22,372	0/0:42,1:40:38.89:0,39,988	0/0:20,0:19:21.07:0,21,304	0/0:40,0:36:48.67:0,49,677	0/0:33,0:30:13.50:0,14,319	0/0:40,0:36:28.57:0,29,309	0/0:38,0:37:18.43:0,18,576	0/0:41,0:39:47.76:0,48,823	0/0:18,0:18:25.15:0,25,360	0/1:31,0:30:31.58:32,0,712	0/0:48,0:34:67.98:0,68,846	0/0:17,1:17:14.75:0,15,221	0/0:121,1:106:51.52:0,52,681	0/0:27,0:24:8.21:0,8,135	1/1:18,0:17:0.56:2,1,0	0/0:38,0:38:14.80:0,15,174	0/1:23,0:22:26.69:27,0,226	0/0:32,0:29:64.29:0,64,859	0/0:20,0:20:34.46:0,34,422	0/0:19,0:18:38.51:0,39,425
chr10	16098154	.	G	GCC	51.24	PASS	AB=0.980;AC=8;AF=0.143;AN=56;BaseQRankSum=7.357;DP=929;FS=23.010;HRun=0;HaplotypeScore=248.9385;InbreedingCoeff=-0.0452;MQ=36.82;MQ0=42;MQRankSum=-7.158;QD=0.25;ReadPosRankSum=-1.049;VQSLOD=0.9792;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,1:36:27.81:0,28,380	0/0:8,0:7:5.81:0,6,34	0/0:17,0:12:23.08:0,23,432	0/0:26,0:14:42.13:0,42,620	0/0:19,0:18:24.06:0,24,336	0/1:16,0:14:18.30:18,0,33	0/0:48,1:45:4.62:0,5,346	0/1:51,0:35:48.87:49,0,391	0/0:42,1:41:30.37:0,30,377	0/0:43,0:39:94.89:0,95,1212	0/0:21,0:20:27.09:0,27,399	0/0:39,1:36:54.58:0,55,769	0/1:31,0:28:37.68:38,0,276	0/0:37,0:33:23.06:0,23,256	0/0:36,1:36:39.58:0,40,563	0/1:39,2:37:17.51:18,0,680	0/1:17,0:18:34.27:34,0,326	0/1:31,0:30:16.07:16,0,819	0/0:47,0:33:58.56:0,59,753	0/0:20,0:19:14.34:0,14,221	0/0:116,0:100:30.15:0,30,422	0/0:25,0:23:6.87:0,7,124	1/1:18,0:16:0.56:2,1,0	0/0:38,1:39:16.33:0,16,203	0/0:24,0:23:16.95:0,17,248	0/0:30,1:28:31.54:0,32,967	0/0:18,0:18:41.41:0,41,430	0/0:21,0:20:44.31:0,44,525
chr10	16098156	.	G	GTGTACC	280.77	PASS	AB=0.973;AC=9;AF=0.161;AN=56;BaseQRankSum=5.859;DP=926;FS=44.482;HRun=0;HaplotypeScore=306.4321;InbreedingCoeff=-0.0910;MQ=36.07;MQ0=40;MQRankSum=-4.863;QD=0.98;ReadPosRankSum=2.598;VQSLOD=1.5271;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,1:36:34.28:0,34,532	0/0:9,0:8:6.49:0,6,103	0/0:16,0:12:18.06:0,18,321	0/0:25,0:11:30.10:0,30,575	0/0:18,0:17:18.06:0,18,313	0/0:16,0:14:6.34:0,6,75	0/1:51,0:47:43.59:44,0,343	0/1:54,0:35:53.18:53,0,729	0/1:42,0:40:9.57:10,0,504	0/0:41,0:37:86.08:0,86,1405	0/0:21,0:20:27.09:0,27,492	0/0:38,0:34:48.13:0,48,701	0/1:29,0:26:90:90,0,260	0/0:40,0:36:18.65:0,19,311	0/0:40,1:40:14.45:0,14,515	0/1:39,2:38:89.18:89,0,773	0/1:17,0:18:46.57:47,0,423	0/1:30,0:30:75.20:75,0,870	0/0:46,0:32:56.17:0,56,903	0/0:20,0:19:7.98:0,8,175	0/0:118,0:102:32.97:0,33,536	0/0:25,0:24:5.50:0,5,96	1/1:18,0:16:0.47:1,0,0	0/0:38,0:38:15.42:0,15,265	0/0:23,0:22:7.52:0,8,129	0/0:30,0:27:43.70:0,44,1018	0/0:18,0:18:32.13:0,32,459	0/0:18,0:17:40.01:0,40,671
chr10	16098158	.	G	GCC	114.73	PASS	AB=0.974;AC=8;AF=0.143;AN=56;BaseQRankSum=6.915;DP=922;FS=21.195;HRun=0;HaplotypeScore=259.7661;InbreedingCoeff=-0.0368;MQ=34.67;MQ0=39;MQRankSum=-6.021;QD=0.55;ReadPosRankSum=-0.561;VQSLOD=1.0856;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:37:24.87:0,25,359	0/0:9,0:8:5.91:0,6,63	0/0:16,0:11:18.07:0,18,342	0/0:25,0:10:30.10:0,30,456	0/0:17,1:16:21.03:0,21,269	0/1:17,0:15:18.30:18,0,33	0/1:50,0:44:12.43:12,0,230	0/1:55,0:35:87.68:88,0,544	0/0:44,0:41:27.64:0,28,398	0/0:42,0:38:82.22:0,82,1076	0/0:21,0:20:27.09:0,27,390	0/0:37,0:33:45.52:0,46,642	0/1:26,2:25:47.95:48,0,282	0/0:39,1:36:22.85:0,23,243	0/0:42,0:40:42.38:0,42,551	0/0:43,0:39:36.09:0,36,782	0/1:18,0:19:45.57:46,0,339	0/0:31,0:30:37.60:0,38,836	0/0:41,0:30:59.29:0,59,698	0/0:17,1:17:11.40:0,11,156	0/0:117,0:101:30.63:0,31,405	0/0:26,0:24:4.15:0,4,79	1/1:17,0:15:0.92:2,1,0	0/0:38,0:37:16.87:0,17,207	0/1:23,0:22:24.19:24,0,206	0/0:29,0:27:66.46:0,66,933	0/0:17,0:17:38.69:0,39,361	0/0:18,0:17:41.33:0,41,537
chr10	16098202	.	C	CTG	4704.51	PASS	AB=0.812;AC=29;AF=0.518;AN=56;BaseQRankSum=-1.497;DP=969;FS=12.806;HRun=0;HaplotypeScore=229.0227;InbreedingCoeff=0.5024;MQ=28.73;MQ0=91;MQRankSum=3.009;QD=12.41;ReadPosRankSum=6.669;VQSLOD=3.1792;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:17,11:26:27.97:439,28,0	1/1:3,4:6:5.71:96,6,0	0/0:37,0:2:3.01:0,3,36	0/0:33,0:2:3.01:0,3,34	0/1:13,7:17:24.63:134,0,25	0/1:18,2:17:3.58:4,0,67	0/0:55,0:54:34.90:0,35,431	0/0:86,0:70:99:0,121,1340	0/0:34,0:31:26.92:0,27,249	1/1:23,13:27:16.03:697,16,0	1/1:8,4:12:6.02:97,6,0	1/1:13,11:19:20.81:338,21,0	0/0:29,0:26:16.30:0,16,344	0/1:30,2:28:35.84:36,0,74	1/1:19,8:19:16.88:261,17,0	1/1:22,15:33:12.72:718,13,0	1/1:8,7:16:18.66:348,19,0	0/1:15,5:20:15.43:327,0,15	0/0:53,0:27:47.69:0,48,451	0/0:23,0:20:4.99:0,5,73	0/0:151,1:137:10.74:0,11,215	0/0:24,0:25:5.76:0,6,49	0/0:19,0:14:6.96:0,7,73	1/1:20,1:21:5.81:68,6,0	1/1:15,3:15:7.26:143,7,0	1/1:12,11:18:27.46:393,27,0	1/1:7,7:15:23.79:306,24,0	0/1:7,6:13:43.65:299,0,44
chr10	16098212	.	G	GCC	343.96	PASS	AB=0.981;AC=15;AF=0.268;AN=56;BaseQRankSum=6.715;DP=998;FS=5.781;HRun=0;HaplotypeScore=247.8515;InbreedingCoeff=-0.0571;MQ=28.91;MQ0=84;MQRankSum=-3.174;QD=0.74;ReadPosRankSum=1.309;VQSLOD=2.2107;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:26:27.85:28,0,30	1/1:6,0:6:4.55:23,5,0	0/0:34,0:1:3.01:0,3,49	0/0:30,0:3:6.02:0,6,93	0/0:18,0:16:5.78:0,6,94	0/1:20,0:19:3.95:4,0,94	0/0:61,4:57:42.39:0,42,612	0/0:108,0:81:99:0,194,3033	0/1:37,2:33:5.01:5,0,391	0/0:41,0:30:23.83:0,24,411	0/0:9,0:9:0:0,0,1	1/1:22,0:17:14.15:75,14,0	0/0:33,2:28:14.44:0,14,516	0/0:36,1:33:1.87:0,2,160	0/1:27,0:20:14.12:14,0,48	0/1:33,0:30:35.60:36,0,124	0/1:19,0:17:66.20:66,0,93	0/0:15,0:15:7.32:0,7,160	0/0:58,1:29:66.17:0,66,978	0/0:24,1:22:7.91:0,8,135	0/1:175,8:150:99:113,0,333	0/1:25,1:23:12.80:49,0,13	0/0:20,0:15:6.45:0,6,98	0/1:21,2:22:1.56:49,0,2	0/0:18,0:14:0.97:0,1,45	0/1:26,0:20:7.51:8,0,329	0/1:14,0:13:21.76:22,0,137	0/0:14,0:13:4.64:0,5,125
chr10	16098228	.	CTG	C	560.72	PASS	AB=0.942;AC=15;AF=0.278;AN=54;BaseQRankSum=0.226;DP=880;FS=0.000;HRun=0;HaplotypeScore=200.8913;InbreedingCoeff=-0.2449;MQ=28.48;MQ0=83;MQRankSum=-2.121;QD=0.90;ReadPosRankSum=2.286;VQSLOD=2.6142;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:15,0:14:0.27:0,0,1	0/0:1,0:2:2.99:0,3,24	0/0:39,0:2:2.80:0,3,13	0/0:31,0:4:9:0,9,118	0/0:5,0:9:9.01:0,9,97	0/1:15,3:17:49.25:49,0,106	0/1:58,2:54:7.60:8,0,802	0/1:95,16:83:99:362,0,1188	0/1:25,4:24:99:144,0,293	0/0:27,0:21:33.42:0,33,376	./.	0/0:15,0:8:2.65:0,3,66	0/0:32,2:27:0.58:0,1,160	0/1:31,2:28:28.88:29,0,90	0/1:18,0:12:0.77:1,0,44	0/1:29,0:29:6.30:6,0,162	0/1:7,0:14:3.80:4,0,70	0/0:13,0:13:15.04:0,15,144	0/1:50,1:20:25.12:25,0,135	0/1:22,2:20:32.10:32,0,42	0/1:161,12:145:3.31:3,0,186	0/0:17,1:15:2.46:0,2,48	0/1:15,1:11:12.50:12,0,48	1/1:18,3:20:2.50:15,3,0	0/0:10,0:6:4.26:0,4,47	0/0:18,1:21:45.04:0,45,526	0/0:6,0:11:23.98:0,24,231	0/0:10,0:9:3.90:0,4,51
chr10	16098233	.	T	TAC	51.83	PASS	AB=0.957;AC=8;AF=0.143;AN=56;BaseQRankSum=5.397;DP=834;FS=7.838;HRun=0;HaplotypeScore=190.9811;InbreedingCoeff=-0.0466;MQ=27.86;MQ0=82;MQRankSum=-2.753;QD=0.42;ReadPosRankSum=2.577;VQSLOD=2.1954;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:13:11.81:0,12,116	1/1:2,0:2:2.60:10,3,0	0/0:43,0:2:4.74:0,5,22	0/0:38,0:7:21.03:0,21,296	0/0:11,0:9:6.02:0,6,92	0/1:16,1:15:2.03:2,0,126	0/0:57,1:51:64.23:0,64,957	0/0:94,0:67:99:0,138,2206	0/1:23,4:21:82.40:82,0,340	0/0:31,0:20:40.75:0,41,600	0/0:4,0:4:3.01:0,3,46	0/0:14,0:7:17.68:0,18,165	0/0:31,3:26:26.84:0,27,470	0/0:31,1:27:17.92:0,18,214	0/0:16,0:10:2.63:0,3,101	0/0:31,0:29:30.13:0,30,420	0/1:15,0:13:19.67:20,0,83	0/0:12,0:11:4.62:0,5,241	0/0:46,0:17:36.03:0,36,465	0/0:22,0:19:5.64:0,6,70	0/0:161,1:135:24.35:0,24,369	0/0:16,1:14:2.63:0,3,48	0/0:15,0:10:7.42:0,7,91	0/1:23,0:21:10.46:10,0,39	0/0:10,0:5:7.27:0,7,95	0/1:26,0:21:5.48:5,0,401	0/1:12,0:12:37.78:38,0,93	0/0:7,0:6:6.60:0,7,94
chr10	16098238	.	G	GCC	40.68	PASS	AB=0.981;AC=9;AF=0.161;AN=56;BaseQRankSum=5.547;DP=778;FS=2.442;HRun=0;HaplotypeScore=184.0514;InbreedingCoeff=-0.0731;MQ=28.06;MQ0=74;MQRankSum=-3.432;QD=0.15;ReadPosRankSum=0.657;VQSLOD=2.9433;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:11:10.95:0,11,96	1/1:2,0:2:2.68:11,3,0	0/0:39,0:3:7:0,7,32	0/0:42,0:9:8.55:0,9,217	0/0:11,0:9:6.26:0,6,92	0/0:18,0:16:12.45:0,12,167	0/0:52,0:45:23.89:0,24,878	0/0:81,0:57:99:0,153,1918	0/0:26,0:20:40.22:0,40,431	0/0:32,0:21:42.77:0,43,584	0/0:4,0:4:3:0,3,25	0/0:16,0:10:23.49:0,23,235	0/0:26,0:20:35.70:0,36,402	0/1:28,2:26:34.99:35,0,121	0/0:16,0:11:8.27:0,8,77	0/0:32,0:29:33.70:0,34,426	0/1:14,0:12:21.55:22,0,29	0/0:11,0:10:6.18:0,6,174	0/0:37,0:12:23.79:0,24,282	0/0:18,1:18:5.31:0,5,69	0/1:147,1:123:3.69:4,0,278	0/0:15,0:12:2.10:0,2,48	0/1:13,1:9:13.76:14,0,72	0/1:22,0:20:13.76:24,0,14	0/0:10,0:4:4.26:0,4,49	0/1:27,0:22:7.63:8,0,402	0/1:14,0:13:50.65:51,0,98	0/0:7,0:6:7.58:0,8,98
chr10	16098242	.	GTGCC	G	1010.80	PASS	AB=0.972;AC=13;AF=0.241;AN=54;BaseQRankSum=2.581;DP=678;FS=20.340;HRun=0;HaplotypeScore=171.8091;InbreedingCoeff=-0.1472;MQ=28.34;MQ0=53;MQRankSum=0.733;QD=4.81;ReadPosRankSum=-2.688;VQSLOD=0.4038;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:9,1:10:37.15:122,0,37	1/1:2,0:2:1.25:3,1,0	0/1:40,0:4:18.25:23,0,18	0/0:43,0:10:27.02:0,27,335	0/0:11,0:8:6.02:0,6,89	0/0:17,0:15:1.34:0,1,154	0/0:47,0:41:57.13:0,57,1021	0/0:61,0:46:97.48:0,97,1779	0/0:24,0:20:25.14:0,25,289	0/1:25,2:17:99:132,0,243	./.	0/1:15,1:10:80.57:137,0,81	0/1:23,0:18:2.97:3,0,220	0/0:28,0:24:10.68:0,11,174	0/1:17,0:12:90.77:91,0,95	0/1:31,1:29:99:500,0,281	0/1:13,1:12:3.34:84,0,3	0/1:8,0:7:7.75:8,0,245	0/0:23,0:7:12.01:0,12,187	0/0:15,0:15:5.15:0,5,81	0/0:119,0:100:18.15:0,18,257	0/0:11,0:8:2.65:0,3,63	0/0:9,0:8:7.50:0,7,35	0/0:20,0:18:0.50:0,0,2	0/0:10,0:4:1.25:0,1,3	0/0:26,0:22:43.84:0,44,914	0/1:12,0:12:3.01:3,0,177	0/1:7,0:6:36.84:37,0,56
chr10	16098250	.	GTA	G	120.22	PASS	AB=0.826;AC=7;AF=0.135;AN=52;BaseQRankSum=4.293;DP=550;FS=8.168;HRun=0;HaplotypeScore=139.4452;InbreedingCoeff=-0.0348;MQ=27.67;MQ0=46;MQRankSum=-2.337;QD=1.23;ReadPosRankSum=-0.984;VQSLOD=1.7240;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:4,1:4:1.75:0,2,28	0/0:1,0:1:2.50:0,2,9	0/0:34,0:5:9.22:0,9,134	0/0:42,0:11:23.79:0,24,337	0/0:9,0:6:6.01:0,6,58	0/0:14,0:12:15.87:0,16,186	0/0:37,0:31:47.27:0,47,720	0/0:47,0:37:94.71:0,95,1267	0/0:21,0:18:26.29:0,26,300	0/0:12,0:8:20.86:0,21,176	./.	0/1:9,7:9:34.30:34,0,82	0/1:17,0:14:13.61:14,0,168	0/0:24,0:22:12.22:0,12,168	0/1:12,6:14:22.69:23,0,104	0/1:20,8:25:99:116,0,166	0/1:12,0:10:25.17:27,0,25	0/0:8,0:7:11.72:0,12,147	0/0:20,0:6:9.03:0,9,174	0/0:10,0:9:2.77:0,3,54	0/0:94,0:83:0.14:0,0,139	0/0:9,0:7:2.69:0,3,29	1/1:5,0:5:1.06:24,1,0	0/0:18,0:16:0.37:0,0,2	./.	0/0:20,0:19:51.03:0,51,519	0/0:12,0:11:14.88:0,15,162	0/0:1,0:1:3.01:0,3,33
chr10	16098259	.	TAC	T	493.26	PASS	AB=0.868;AC=11;AF=0.229;AN=48;BaseQRankSum=0.799;DP=445;FS=11.314;HRun=0;HaplotypeScore=121.5348;InbreedingCoeff=0.0910;MQ=35.32;MQ0=29;MQRankSum=-0.908;QD=4.15;ReadPosRankSum=-0.192;VQSLOD=1.5446;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:3:1.28:0,1,58	./.	0/1:31,0:7:19.66:20,0,143	0/0:43,0:12:24.04:0,24,421	0/0:9,0:6:6.02:0,6,74	0/1:6,2:8:39.81:40,0,54	0/1:12,13:20:99:334,0,127	0/0:33,0:21:48.15:0,48,892	0/1:13,2:11:24.18:37,0,24	0/0:13,0:9:23.56:0,24,257	./.	0/0:18,0:11:26.92:0,27,449	1/1:11,4:12:0.14:130,0,0	0/0:17,0:15:2.89:0,3,54	0/0:23,0:20:21.49:0,21,423	0/0:28,0:24:47.96:0,48,828	0/1:9,0:8:5.46:5,0,113	0/0:6,0:5:13.29:0,13,234	1/1:7,1:4:3.01:46,3,0	1/1:8,0:6:0.47:1,0,0	0/0:56,10:58:13.33:0,13,188	0/0:6,3:8:3.01:0,3,34	0/0:4,1:4:2.98:0,3,21	0/0:9,1:9:0.32:0,0,1	./.	0/0:16,0:16:42.13:0,42,545	0/0:10,0:9:11.27:0,11,160	./.
chr10	16098262	.	C	CTG	95.03	PASS	AB=0.960;AC=9;AF=0.188;AN=48;BaseQRankSum=1.129;DP=460;FS=14.531;HRun=0;HaplotypeScore=135.5755;InbreedingCoeff=-0.0243;MQ=37.10;MQ0=29;MQRankSum=-2.869;QD=0.68;ReadPosRankSum=1.028;VQSLOD=2.0814;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:4,1:3:3.01:0,3,41	./.	0/1:36,0:7:37.48:37,0,98	0/0:42,0:13:23.80:0,24,309	0/0:9,0:6:6.02:0,6,82	0/0:7,0:7:0.66:0,1,38	0/1:24,0:19:19.50:20,0,55	0/1:34,1:20:15.65:16,0,262	0/0:13,0:10:8.52:0,9,50	0/0:14,0:10:22.86:0,23,255	./.	0/0:20,0:13:26.98:0,27,300	0/1:18,0:14:1.23:1,0,35	0/0:15,0:13:2.99:0,3,39	0/0:27,0:22:26.50:0,26,286	0/0:34,1:31:8.94:0,9,557	0/1:9,0:8:35.13:35,0,122	0/1:4,2:5:90.61:91,0,109	1/1:4,0:3:2.22:7,2,0	0/1:7,0:6:0.08:0,0,0	0/0:62,0:54:10.30:0,10,128	0/0:9,0:8:2.91:0,3,22	0/0:5,0:4:5.89:0,6,56	0/0:10,0:9:0.47:0,0,1	./.	0/0:21,0:20:41.99:0,42,576	0/0:11,0:10:17.94:0,18,230	./.
chr10	16098274	.	GTACC	G	251.36	PASS	AB=0.984;AC=14;AF=0.269;AN=52;BaseQRankSum=2.225;DP=504;FS=17.254;HRun=0;HaplotypeScore=168.1619;InbreedingCoeff=-0.1219;MQ=39.36;MQ0=37;MQRankSum=0.531;QD=0.97;ReadPosRankSum=0.285;VQSLOD=1.9569;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:8,0:6:10.63:11,0,50	./.	0/1:38,0:9:28.81:29,0,85	0/0:39,0:12:25.06:0,25,326	0/0:10,0:7:6.02:0,6,104	0/0:4,1:5:3.01:0,3,38	0/1:21,2:21:75.94:76,0,229	0/1:21,0:8:34.65:35,0,35	0/1:13,0:12:16.64:24,0,17	0/0:14,0:11:28.49:0,28,386	0/0:7,0:7:0:0,0,0	0/1:33,1:27:45.55:46,0,497	0/0:19,1:18:19.32:0,19,261	0/0:15,1:14:4.78:0,5,30	0/1:34,1:28:6.38:6,0,342	0/1:41,0:37:67.17:67,0,372	0/1:10,0:8:0.39:0,0,103	0/1:11,0:9:25.84:26,0,180	0/0:11,1:6:9.74:0,10,153	1/1:6,0:5:0.47:1,0,0	0/0:53,4:48:6.41:0,6,76	0/0:8,2:9:3.48:0,3,57	0/0:6,0:5:3.90:0,4,38	0/0:8,0:7:0.14:0,0,1	1/1:16,0:10:3.01:59,3,0	0/0:31,0:28:58.39:0,58,975	0/0:10,0:9:13.55:0,14,247	./.
chr10	16098275	.	TAC	T	61.24	PASS	AB=0.977;AC=11;AF=0.220;AN=50;BaseQRankSum=2.007;DP=493;FS=7.629;HRun=0;HaplotypeScore=156.9470;InbreedingCoeff=0.0245;MQ=39.48;MQ0=39;MQRankSum=0.493;QD=0.39;ReadPosRankSum=0.486;VQSLOD=2.0964;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:8,0:6:0.92:1,0,55	./.	0/0:40,0:9:5.56:0,6,149	0/0:40,0:12:24.62:0,25,300	0/0:10,0:7:6.02:0,6,92	0/0:5,0:5:3.01:0,3,42	0/1:23,0:20:33.06:33,0,294	0/0:21,0:7:4.69:0,5,61	0/1:12,0:12:3.29:3,0,119	0/0:14,0:11:29.59:0,30,467	./.	0/1:35,0:28:30:30,0,576	0/0:20,0:18:22.42:0,22,318	0/0:16,0:14:5.83:0,6,49	0/0:31,2:26:19.79:0,20,395	0/1:37,3:36:54.13:54,0,390	0/0:8,1:7:15.09:0,15,157	0/1:9,1:8:18.31:18,0,173	0/0:13,0:7:17.85:0,18,203	1/1:6,0:5:0.47:1,0,0	0/0:46,4:41:3.22:0,3,116	0/0:10,0:9:3.01:0,3,61	0/0:6,0:5:4.26:0,4,47	0/1:8,0:7:0.03:0,0,0	1/1:16,0:10:3.01:34,3,0	0/0:31,0:28:74.63:0,75,1136	0/0:10,0:9:16.91:0,17,229	./.
chr10	16098278	.	CTGTG	C	353.81	PASS	AB=0.886;AC=14;AF=0.280;AN=50;BaseQRankSum=4.917;DP=562;FS=0.909;HRun=0;HaplotypeScore=185.2638;InbreedingCoeff=-0.1930;MQ=38.86;MQ0=43;MQRankSum=-4.132;QD=1.39;ReadPosRankSum=-0.397;VQSLOD=2.5843;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:15:7.45:0,7,199	./.	0/0:37,0:7:12.58:0,13,136	0/0:40,1:12:12.02:0,12,135	./.	0/1:4,0:6:0.04:0,0,0	0/1:21,1:20:16.73:89,0,17	0/1:18,2:6:41.30:41,0,84	0/1:11,3:16:77.52:78,0,109	0/1:14,1:12:63.15:63,0,346	0/0:7,0:7:0:0,0,0	0/0:39,0:32:70.43:0,70,1410	0/1:16,3:19:38.72:39,0,201	0/1:15,2:16:6.92:7,0,37	0/0:37,0:30:41.59:0,42,863	0/0:46,0:42:79.93:0,80,1448	0/1:8,0:7:29.88:30,0,85	0/0:16,0:13:36.02:0,36,650	0/0:14,1:9:1.52:0,2,247	1/1:10,0:9:0.16:0,0,0	0/1:53,2:49:25.26:25,0,137	0/0:13,0:11:2.83:0,3,65	0/0:8,0:7:3.01:0,3,56	0/1:9,3:11:0.08:1,0,0	0/0:19,0:13:2.73:0,3,12	0/1:35,0:31:78.01:78,0,328	0/1:10,0:9:27.09:27,0,136	./.
chr10	16098292	.	GTGTGCCTGTGTACC	G	2654.39	PASS	AB=0.929;AC=12;AF=0.222;AN=54;BaseQRankSum=1.948;DP=704;FS=22.467;HRun=0;HaplotypeScore=271.8599;InbreedingCoeff=-0.3020;MQ=39.37;MQ0=56;MQRankSum=-4.472;QD=8.09;ReadPosRankSum=-2.148;VQSLOD=0.7572;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:24:23.90:0,24,872	0/0:1,0:1:0:0,0,0	0/0:41,0:9:9.22:0,9,168	0/0:38,0:6:8.86:0,9,58	0/0:3,9:11:1.25:0,1,3	0/1:14,0:14:13.91:14,0,61	0/1:26,0:22:35.93:36,0,176	0/1:34,0:16:30.63:31,0,169	0/1:20,0:20:38.27:38,0,318	0/1:17,2:17:99:448,0,324	0/0:6,7:13:3.01:0,3,60	0/0:43,0:38:31.18:0,31,2841	0/1:22,0:19:6.41:6,0,224	0/1:24,0:22:47.16:47,0,95	0/0:48,0:41:81.88:0,82,2432	0/0:57,0:53:48.66:0,49,2952	0/1:12,2:12:99:283,0,119	0/0:23,0:19:24.63:0,25,1645	0/0:18,0:8:5.43:0,5,232	0/0:11,0:10:6.03:0,6,129	0/1:73,0:59:54.51:55,0,346	0/0:11,0:10:3.76:0,4,38	0/0:14,0:12:3.35:0,3,111	0/0:17,0:14:3.08:0,3,32	0/1:24,0:19:33.05:33,0,199	0/1:17,22:35:99:1297,0,205	0/1:11,5:15:99:505,0,106	./.
chr10	16098302	.	GTACC	G	775.67	PASS	AB=0.915;AC=11;AF=0.204;AN=54;BaseQRankSum=5.956;DP=729;FS=10.501;HRun=0;HaplotypeScore=235.2731;InbreedingCoeff=-0.1494;MQ=38.36;MQ0=55;MQRankSum=-5.401;QD=2.86;ReadPosRankSum=-0.532;VQSLOD=1.0935;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,2:27:17.57:0,18,855	0/1:2,0:2:0:0,0,0	0/0:41,0:9:4.22:0,4,299	0/1:40,0:5:6.91:7,0,49	0/0:12,0:11:1.25:0,1,3	0/0:12,1:12:8.58:0,9,104	0/0:34,0:29:13.51:0,14,271	0/0:34,1:16:31.71:0,32,361	0/1:20,0:19:25.54:26,0,253	0/1:19,2:18:99:114,0,696	0/0:13,0:13:3.01:0,3,30	0/0:48,1:44:83.71:0,84,2154	0/1:22,0:19:29.82:30,0,250	0/0:22,2:23:8.36:0,8,85	0/0:50,0:43:87.02:0,87,1867	0/0:57,1:55:93.25:0,93,2156	0/1:11,2:12:67.26:67,0,155	0/0:23,0:19:49.34:0,49,1170	0/1:15,0:7:47.48:47,0,197	0/0:11,1:11:7.57:0,8,128	0/1:71,5:63:11.44:11,0,317	0/1:9,2:10:0.12:1,0,0	0/0:17,0:15:2.88:0,3,56	0/0:17,0:15:3.42:0,3,32	0/0:27,0:23:11.99:0,12,177	0/1:34,1:31:99:393,0,229	0/1:6,7:12:45.51:208,0,46	./.
chr10	16098316	.	GTGTACC	G	437.47	PASS	AB=0.989;AC=12;AF=0.222;AN=54;BaseQRankSum=6.648;DP=904;FS=38.008;HRun=0;HaplotypeScore=295.6072;InbreedingCoeff=-0.1378;MQ=34.75;MQ0=65;MQRankSum=-6.320;QD=1.12;ReadPosRankSum=-1.957;VQSLOD=1.1621;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,2:35:61.34:0,61,1621	0/0:4,0:4:3.01:0,3,43	0/0:30,0:5:3.85:0,4,39	0/0:36,0:3:3.01:0,3,38	0/0:16,0:15:7.27:0,7,124	1/1:14,0:12:10.42:67,10,0	0/1:61,1:51:16.61:17,0,278	0/0:41,0:20:44.14:0,44,465	0/1:23,0:20:1.95:2,0,412	0/1:35,1:30:44.40:44,0,1559	0/0:14,0:13:6.38:0,6,123	0/0:57,2:53:76.34:0,76,3694	0/1:29,0:26:33.85:34,0,310	0/0:40,0:37:25.52:0,26,235	0/0:54,0:46:84.29:0,84,2726	0/0:60,0:56:19.09:0,19,2661	0/1:21,1:21:99:161,0,478	0/0:22,0:18:37.16:0,37,1322	0/1:17,0:8:8.93:9,0,245	0/1:16,0:14:8.70:9,0,182	0/1:105,0:87:37.55:38,0,489	0/0:22,0:20:4.47:0,4,24	0/0:22,0:19:5.98:0,6,143	0/1:25,0:22:6.34:6,0,87	0/0:33,0:27:17.35:0,17,463	0/1:40,1:35:99:191,0,1171	0/0:19,0:16:4.10:0,4,236	./.
chr10	16098360	.	GTGTACC	G	318.29	PASS	AB=0.981;AC=13;AF=0.232;AN=56;BaseQRankSum=5.289;DP=1100;FS=6.341;HRun=0;HaplotypeScore=338.6785;InbreedingCoeff=-0.2046;MQ=32.30;MQ0=113;MQRankSum=-7.229;QD=0.64;ReadPosRankSum=-1.166;VQSLOD=1.2055;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:42:55.08:0,55,1050	0/1:7,0:6:6.10:6,0,127	1/1:32,0:1:2.04:6,2,0	0/0:42,0:7:9.90:0,10,90	0/1:18,0:18:24.95:25,0,204	0/1:15,1:12:48.05:48,0,84	0/1:65,2:57:2.82:3,0,553	0/0:60,0:26:3.64:0,4,706	0/1:23,2:22:99:166,0,163	0/1:44,0:27:11.32:11,0,1114	0/0:12,0:10:5.72:0,6,48	0/0:59,0:55:90.57:0,91,1206	0/1:37,1:31:53.48:53,0,196	0/1:46,1:42:99:108,0,162	0/0:59,0:51:78.35:0,78,1388	0/0:66,0:61:76.16:0,76,1639	0/0:30,0:29:10.04:0,10,933	0/0:31,0:25:5.91:0,6,778	0/1:45,0:19:4.65:5,0,295	0/1:18,0:16:8.21:8,0,135	0/1:142,0:120:15.51:16,0,474	0/0:29,0:26:7.76:0,8,172	0/0:27,1:24:7.44:0,7,104	0/0:32,3:31:10.31:0,10,98	0/0:32,0:27:1.96:0,2,226	0/0:36,0:31:46.90:0,47,961	0/0:30,0:28:46.39:0,46,679	0/0:5,0:4:6.02:0,6,106
chr10	16098366	.	CTGTG	C	4038.24	PASS	AB=0.861;AC=18;AF=0.321;AN=56;BaseQRankSum=-1.262;DP=1058;FS=12.621;HRun=0;HaplotypeScore=298.7753;InbreedingCoeff=-0.3466;MQ=32.24;MQ0=105;MQRankSum=-1.092;QD=5.24;ReadPosRankSum=0.496;VQSLOD=0.8428;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:32,11:37:99:321,0,115	0/0:4,0:6:11.47:0,11,113	0/0:34,0:1:3.01:0,3,48	0/0:44,0:8:15.92:0,16,188	0/1:6,0:12:8.67:9,0,36	0/1:13,2:12:24.48:72,0,24	0/1:61,6:57:31.35:31,0,159	0/1:53,2:27:64.57:65,0,574	0/1:24,1:23:5.52:77,0,6	0/0:38,0:27:35.70:0,36,371	0/0:10,0:9:5.15:0,5,23	1/1:37,16:49:15.58:698,16,0	0/1:33,4:31:84.23:90,0,84	0/1:42,4:43:68.89:69,0,74	0/1:38,19:50:99:633,0,151	0/1:35,25:56:82.72:1176,0,83	0/0:8,0:25:55.84:0,56,329	0/1:19,10:23:24.98:527,0,25	0/1:41,3:18:70.57:87,0,71	0/1:13,4:15:7.84:8,0,98	0/1:129,6:116:33.09:33,0,91	0/0:28,1:26:4.16:0,4,84	0/0:24,1:22:2.35:0,2,43	0/1:31,0:30:43.64:44,0,50	0/1:30,3:28:98.26:98,0,123	0/0:23,0:28:52.34:0,52,453	0/0:10,0:27:34.26:0,34,162	0/0:3,0:5:2.74:0,3,12
chr10	16098404	.	CTG	C	168.77	PASS	AB=0.931;AC=15;AF=0.268;AN=56;BaseQRankSum=7.760;DP=700;FS=21.559;HRun=0;HaplotypeScore=195.4634;InbreedingCoeff=0.6024;MQ=45.71;MQ0=28;MQRankSum=-6.518;QD=1.03;ReadPosRankSum=-1.015;VQSLOD=1.2703;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:28:53.31:0,53,922	0/0:4,0:3:6.02:0,6,106	0/0:43,0:16:38.35:0,38,670	0/0:39,0:19:41.93:0,42,720	0/0:19,0:19:45.15:0,45,790	1/1:7,0:6:8.40:63,8,0	1/1:17,0:14:3.73:36,4,0	0/0:15,0:9:9.03:0,9,117	1/1:12,1:13:11.23:73,11,0	0/0:29,0:26:69.24:0,69,1215	0/0:14,0:14:23.83:0,24,426	0/0:56,0:54:99:0,113,2003	0/1:12,2:12:24.98:70,0,25	1/1:14,3:16:5.71:24,6,0	0/0:54,0:51:88.66:0,89,1661	0/0:63,2:61:99:0,132,2298	0/0:31,0:31:43.76:0,44,1363	0/0:26,0:25:75:0,75,1253	0/1:10,1:5:4.42:33,0,4	0/0:6,0:6:0:0,0,0	1/1:49,14:55:2.33:16,2,0	0/0:7,0:7:0.30:0,0,1	0/1:10,0:10:0:1,0,0	1/1:8,2:10:0.89:2,1,0	0/0:33,1:30:36.75:0,37,1094	0/0:38,0:33:93.32:0,93,1619	0/0:17,0:17:42.13:0,42,744	0/0:8,0:8:18.06:0,18,319
chr10	16098408	.	GTGTACC	G	372.62	PASS	AB=0.889;AC=10;AF=0.179;AN=56;BaseQRankSum=6.369;DP=680;FS=18.372;HRun=0;HaplotypeScore=215.5214;InbreedingCoeff=0.3530;MQ=46.36;MQ0=26;MQRankSum=-3.841;QD=4.49;ReadPosRankSum=0.497;VQSLOD=0.9070;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:30:62.29:0,62,1811	0/0:4,0:3:6.01:0,6,214	0/0:45,0:16:40.51:0,41,1186	0/0:38,0:17:42.99:0,43,1116	0/0:19,0:19:45.15:0,45,1383	0/1:6,1:6:32.66:41,0,33	0/1:14,1:13:32.25:49,0,32	0/0:11,0:4:2.74:0,3,36	0/1:9,3:11:64.94:155,0,65	0/0:29,0:26:63.22:0,63,2128	0/0:15,0:15:27.56:0,28,906	0/0:54,0:52:99:0,117,3761	1/1:10,2:12:12.50:177,12,0	1/1:9,4:11:2:51,2,0	0/0:53,0:50:85.68:0,86,3213	0/0:66,0:62:99:0,148,4513	0/0:32,0:32:87.25:0,87,2394	0/0:26,0:25:72.24:0,72,2491	0/1:6,0:3:3.01:29,0,3	0/0:7,0:7:0:0,0,0	0/0:62,0:56:3.80:0,4,29	0/0:6,2:8:0.42:0,0,1	0/1:8,2:10:0:0,0,0	0/1:7,1:8:0.11:0,0,0	0/0:34,0:30:69.05:0,69,2140	0/0:37,0:32:90.31:0,90,2935	0/0:18,0:18:42.02:0,42,1414	0/0:7,0:7:18.06:0,18,552
chr10	16098410	.	GTA	G	150.95	PASS	AB=0.917;AC=17;AF=0.304;AN=56;BaseQRankSum=7.988;DP=660;FS=28.488;HRun=0;HaplotypeScore=178.8739;InbreedingCoeff=0.6522;MQ=46.83;MQ0=30;MQRankSum=-5.742;QD=1.13;ReadPosRankSum=-0.608;VQSLOD=0.7238;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:54.11:0,54,1040	0/0:3,0:3:6.02:0,6,122	0/0:43,1:16:46.93:0,47,817	0/0:40,1:17:41.83:0,42,804	0/0:20,0:20:45.14:0,45,867	1/1:6,0:5:8.99:81,9,0	1/1:7,4:12:2.84:27,3,0	0/0:13,0:5:11.42:0,11,79	1/1:9,0:11:13.10:73,13,0	0/0:30,0:27:75.13:0,75,1365	0/0:15,0:15:26.82:0,27,507	0/0:53,0:51:99:0,117,2276	0/1:10,0:11:3.92:70,0,4	1/1:11,0:9:2.25:10,2,0	0/0:48,4:49:73.31:0,73,1860	0/0:60,1:58:99:0,134,2657	0/0:33,0:33:66.95:0,67,1586	0/0:27,0:26:75.21:0,75,1460	1/1:6,1:3:5.55:29,6,0	0/0:4,2:6:0:0,0,0	1/1:53,4:53:0.20:2,0,0	0/0:6,1:7:0.33:0,0,1	1/1:7,2:9:0.88:2,1,0	1/1:6,0:6:1.36:3,1,0	0/0:28,2:28:5.69:0,6,1207	0/0:36,0:32:93.28:0,93,1812	0/0:18,0:18:42.13:0,42,834	0/0:7,0:7:18.06:0,18,354
chr10	16098411	.	TAC	T	88.30	PASS	AB=1.000;AC=10;AF=0.179;AN=56;BaseQRankSum=7.230;DP=634;FS=18.763;HRun=0;HaplotypeScore=173.1494;InbreedingCoeff=0.5554;MQ=47.53;MQ0=26;MQRankSum=-4.602;QD=1.52;ReadPosRankSum=1.274;VQSLOD=1.7279;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:27:58.04:0,58,1083	0/0:3,1:4:6.02:0,6,122	0/0:42,0:16:46.67:0,47,815	0/0:41,0:17:41.42:0,41,769	0/0:20,0:20:45.15:0,45,861	1/1:5,1:5:8.18:63,8,0	0/1:12,0:11:8.84:9,0,15	0/0:10,0:2:5.96:0,6,57	0/1:10,0:10:1.32:50,0,1	0/0:30,0:27:69.23:0,69,1351	0/0:15,0:15:27.09:0,27,514	0/0:52,0:50:99:0,118,2309	1/1:8,1:9:11.09:78,11,0	1/1:10,1:9:1.97:13,2,0	0/0:52,0:49:95.59:0,96,1897	0/0:63,0:60:99:0,148,2733	0/0:33,0:33:87.39:0,87,1649	0/0:26,0:25:75.26:0,75,1497	0/1:5,0:3:2.41:3,0,2	0/0:5,0:5:0:0,0,0	0/0:50,5:51:5.19:0,5,29	0/0:4,0:4:0.80:0,1,1	0/0:4,0:4:0:0,0,0	0/1:5,0:5:0.12:0,0,0	0/0:30,0:29:39.37:0,39,1250	0/0:37,0:33:90.31:0,90,1791	0/0:18,0:18:42.13:0,42,839	0/0:7,0:7:18.06:0,18,353
chr10	16098416	.	GTGTACC	G	335.01	PASS	AB=0.906;AC=10;AF=0.179;AN=56;BaseQRankSum=6.655;DP=644;FS=11.497;HRun=0;HaplotypeScore=202.1493;InbreedingCoeff=0.3957;MQ=47.64;MQ0=28;MQRankSum=-3.402;QD=5.78;ReadPosRankSum=0.060;VQSLOD=1.8153;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:32:71.37:0,71,2046	0/0:4,0:4:6.01:0,6,213	0/0:47,0:16:35.43:0,35,1055	0/0:36,0:17:20.15:0,20,975	0/0:20,0:20:39.13:0,39,1327	0/1:5,1:5:34.16:41,0,34	0/1:10,2:10:35.91:36,0,74	0/0:9,0:2:6.29:0,6,71	0/1:9,1:10:59.51:128,0,60	0/0:32,0:28:75.26:0,75,2354	0/0:14,0:14:30.53:0,31,878	0/0:54,0:52:99:0,120,3711	1/1:7,1:7:12.03:152,12,0	1/1:11,0:9:2.06:44,2,0	0/0:53,0:50:79.90:0,80,3066	0/0:64,0:61:99:0,151,4540	0/0:32,0:32:78.27:0,78,2397	0/0:29,0:28:84.29:0,84,2636	0/1:5,0:3:2.32:50,0,2	0/0:5,0:5:0:0,0,0	0/0:55,0:51:6.05:0,6,47	0/0:4,0:4:0.42:0,0,1	0/0:4,0:4:0:0,0,0	1/1:6,0:6:2.76:21,3,0	0/0:30,0:29:69.07:0,69,2201	0/0:36,0:32:90.31:0,90,2869	0/0:18,0:18:42.02:0,42,1267	0/0:6,0:6:15.05:0,15,511
chr10	16098418	.	GTACC	G	258.96	PASS	AB=0.960;AC=12;AF=0.214;AN=56;BaseQRankSum=6.692;DP=639;FS=8.710;HRun=0;HaplotypeScore=186.0581;InbreedingCoeff=0.3700;MQ=47.77;MQ0=28;MQRankSum=-4.035;QD=3.55;ReadPosRankSum=-0.544;VQSLOD=1.7857;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:32:71.37:0,71,1773	0/0:4,0:4:6.02:0,6,167	0/0:46,0:14:12.31:0,12,903	0/0:33,0:15:20.89:0,21,783	0/0:19,0:19:39.13:0,39,1069	0/1:6,0:5:7.47:32,0,7	0/1:12,0:10:27.48:27,0,57	0/1:8,1:2:8.09:8,0,89	0/1:10,0:10:60.47:113,0,60	0/0:32,0:28:75.26:0,75,1984	0/0:15,0:15:33.07:0,33,785	0/0:53,0:51:99:0,121,3038	1/1:7,1:7:11.92:109,12,0	1/1:9,2:9:2:31,2,0	0/0:52,0:49:87.93:0,88,2499	0/0:60,0:58:99:0,150,3750	0/0:32,0:32:81.28:0,81,2115	0/0:29,0:28:84.29:0,84,2232	0/1:5,1:3:2.04:51,0,2	0/1:5,0:5:0.10:0,0,0	0/0:55,2:53:7.71:0,8,51	0/0:4,0:4:0.79:0,1,2	0/0:4,0:4:0:0,0,0	1/1:5,1:6:2.65:28,3,0	0/0:31,0:30:70.42:0,70,1797	0/0:35,0:31:90.31:0,90,2363	0/0:20,0:20:45.15:0,45,1099	0/0:6,0:6:15.05:0,15,396
chr10	16098420	.	ACCTGTG	A	354.42	PASS	AB=0.887;AC=10;AF=0.179;AN=56;BaseQRankSum=6.884;DP=636;FS=13.534;HRun=0;HaplotypeScore=196.9397;InbreedingCoeff=0.3589;MQ=48.13;MQ0=29;MQRankSum=-3.815;QD=6.01;ReadPosRankSum=-0.353;VQSLOD=1.4146;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:33:71.33:0,71,2156	0/0:4,0:4:6.01:0,6,225	0/0:45,0:14:35.45:0,35,1075	0/0:31,0:14:21.66:0,22,991	0/0:19,0:19:39.13:0,39,1369	0/1:5,1:5:24.50:25,0,34	0/1:11,1:10:52.71:53,0,100	0/0:9,0:2:8.95:0,9,114	0/1:7,3:10:77.90:155,0,78	0/0:32,0:28:78.27:0,78,2557	0/0:15,0:15:33.58:0,34,981	0/0:53,0:51:99:0,123,3855	1/1:5,2:6:12:167,12,0	1/1:7,4:9:2.06:56,2,0	0/0:52,0:48:82.80:0,83,3210	0/0:58,0:56:99:0,150,4693	0/0:32,0:32:84.24:0,84,2599	0/0:33,0:32:96.33:0,96,2899	0/1:6,0:3:8.08:29,0,8	0/0:5,0:5:0:0,0,0	0/0:55,0:51:6.97:0,7,65	0/0:2,2:4:0.42:0,0,1	0/0:2,2:4:0:0,0,0	1/1:6,1:7:1.34:4,1,0	0/0:30,0:30:68.98:0,69,2284	0/0:35,0:31:90.31:0,90,3020	0/0:20,0:20:45.03:0,45,1291	0/0:6,0:6:15.05:0,15,542
chr10	16098428	.	GTGTGCATC	G	193.59	PASS	AB=0.937;AC=8;AF=0.143;AN=56;BaseQRankSum=5.664;DP=698;FS=1.401;HRun=0;HaplotypeScore=220.0613;InbreedingCoeff=0.1581;MQ=46.04;MQ0=35;MQRankSum=-3.018;QD=3.58;ReadPosRankSum=-1.713;VQSLOD=2.6327;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:34:69.20:0,69,2539	0/0:5,0:5:6.01:0,6,182	0/0:47,0:14:25.63:0,26,521	0/0:30,0:11:23.49:0,23,702	0/0:24,0:24:39.13:0,39,1258	0/1:4,1:4:49.08:65,0,49	0/0:13,0:11:7.33:0,7,117	0/0:10,0:5:12.03:0,12,333	0/1:8,1:9:70.36:70,0,101	0/0:40,0:34:90.29:0,90,3174	0/0:14,0:13:30.08:0,30,1014	0/0:62,0:60:99:0,123,4774	0/1:7,1:6:62.73:63,0,71	0/0:14,0:12:2.97:0,3,24	0/0:59,0:55:44.40:0,44,3709	0/0:65,0:62:99:0,145,5231	0/0:32,0:32:87.30:0,87,3319	0/0:34,0:33:93.32:0,93,3780	0/1:11,0:4:74.89:101,0,75	0/1:8,0:8:0.02:0,0,0	0/0:55,4:54:4.83:0,5,96	0/0:5,0:5:0.47:0,0,1	0/1:5,0:5:0:0,0,0	1/1:8,0:8:0.42:1,0,0	0/0:30,0:30:66.15:0,66,2742	0/0:39,0:35:93.32:0,93,3296	0/0:18,0:18:30.09:0,30,842	0/0:8,0:8:21.07:0,21,588
chr10	16098432	.	GCA	G	48.37	PASS	AB=0.920;AC=8;AF=0.143;AN=56;BaseQRankSum=5.193;DP=681;FS=0.000;HRun=0;HaplotypeScore=164.3913;InbreedingCoeff=0.1649;MQ=46.20;MQ0=37;MQRankSum=-2.908;QD=0.82;ReadPosRankSum=-0.772;VQSLOD=2.1598;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:32:65.45:0,65,1290	0/0:5,0:5:6.02:0,6,111	0/0:43,0:11:22.12:0,22,396	0/0:31,0:10:23.87:0,24,485	0/0:24,0:24:39.13:0,39,739	0/1:5,0:4:15.22:15,0,36	0/1:10,1:10:40.79:41,0,62	0/0:9,0:5:10.40:0,10,209	0/1:9,1:10:46.07:46,0,101	0/0:41,0:35:90.38:0,90,1749	0/0:14,0:13:29.45:0,29,506	0/0:60,0:58:99:0,121,2322	0/1:7,0:5:1.02:1,0,76	0/0:13,1:12:3.47:0,3,31	0/0:58,0:54:99:0,106,1937	0/0:64,0:61:99:0,143,2721	0/0:33,0:33:90.21:0,90,1670	0/0:34,0:32:96.29:0,96,1878	0/1:11,1:4:48.08:48,0,48	0/0:6,0:7:0:0,0,0	0/0:42,5:48:2.70:0,3,62	0/0:5,0:5:0.47:0,0,1	0/1:4,0:5:0.01:0,0,0	1/1:6,1:8:2.97:10,3,0	0/0:30,0:30:67.44:0,67,1304	0/0:37,0:34:92.52:0,93,1631	0/0:17,0:17:30.07:0,30,528	0/0:9,0:9:20.85:0,21,330
chr10	16098534	.	GTGTGTT	G	1682.57	PASS	AB=0.990;AC=17;AF=0.304;AN=56;BaseQRankSum=8.673;DP=1169;FS=9.517;HRun=0;HaplotypeScore=342.5035;InbreedingCoeff=0.1054;MQ=39.45;MQ0=37;MQRankSum=-6.543;QD=2.79;ReadPosRankSum=-2.651;VQSLOD=0.3050;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:47:92.33:0,92,2852	0/0:10,0:10:24:0,24,500	0/1:39,0:10:5.62:6,0,105	0/0:43,0:8:24.07:0,24,488	0/0:24,0:23:44.86:0,45,1020	1/1:18,1:17:6.78:83,7,0	0/1:59,0:53:99:520,0,116	0/1:33,0:21:18.16:68,0,18	0/1:48,0:45:99:385,0,202	0/0:65,0:59:99:0,143,3199	0/0:18,0:18:11.54:0,12,397	0/0:72,0:69:99:0,143,2801	0/1:46,3:44:99:333,0,213	0/1:46,1:45:99:137,0,218	0/0:54,0:51:99:0,107,1972	0/0:51,0:51:99:0,112,2470	0/1:56,0:55:12.59:13,0,3104	0/0:40,0:35:44.86:0,45,1720	0/1:19,0:11:25.49:25,0,267	0/0:25,0:21:3.76:0,4,21	0/1:142,2:113:36.14:199,0,36	1/1:29,0:26:2.51:18,3,0	1/1:21,0:20:2.46:23,2,0	1/1:39,0:33:5.06:34,5,0	0/0:25,0:24:49.30:0,49,893	0/0:52,0:45:59.46:0,59,2671	0/0:26,0:25:63.81:0,64,1308	0/0:12,0:12:24.05:0,24,587
chr10	16098536	.	GTGTT	G	1334.05	PASS	AB=0.958;AC=15;AF=0.268;AN=56;BaseQRankSum=8.488;DP=1148;FS=18.774;HRun=0;HaplotypeScore=321.7953;InbreedingCoeff=0.0960;MQ=39.77;MQ0=31;MQRankSum=-6.450;QD=2.62;ReadPosRankSum=-3.333;VQSLOD=0.6200;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:48:99:0,101,2484	0/0:10,0:10:4.10:0,4,455	0/0:41,0:10:10.98:0,11,122	0/0:41,0:8:24:0,24,411	0/0:24,0:23:44.44:0,44,888	0/1:17,2:18:8.13:30,0,8	0/1:52,3:52:68.57:229,0,69	0/1:27,0:17:47.55:48,0,85	0/1:40,2:44:99:210,0,211	0/0:67,0:61:99:0,128,2927	0/0:18,0:18:11.97:0,12,348	0/0:72,0:68:79.89:0,80,2558	0/1:43,3:44:99:401,0,144	0/1:43,2:44:87.80:88,0,266	0/0:56,0:52:61.80:0,62,1680	0/0:51,0:51:99:0,105,2275	0/0:54,2:55:12.10:0,12,2773	0/0:38,1:33:34.67:0,35,1348	0/1:16,1:10:56.45:56,0,176	0/1:23,1:21:13.61:18,0,14	1/1:124,4:109:7.33:258,7,0	0/1:29,0:25:9.07:9,0,44	1/1:18,1:18:2.27:23,2,0	1/1:28,6:34:7.41:126,7,0	0/0:25,0:24:49.26:0,49,824	0/0:52,0:44:70.29:0,70,2157	0/0:26,0:25:60.73:0,61,1116	0/0:11,0:11:24.04:0,24,472
chr10	16098624	.	GTACC	G	125.82	PASS	AB=0.913;AC=6;AF=0.107;AN=56;BaseQRankSum=6.875;DP=894;FS=3.748;HRun=0;HaplotypeScore=279.7423;InbreedingCoeff=0.0902;MQ=40.17;MQ0=32;MQRankSum=-5.945;QD=1.02;ReadPosRankSum=-2.793;VQSLOD=1.6151;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,1:25:3.03:0,3,548	1/1:3,0:3:2:37,2,0	0/0:37,0:10:12.61:0,13,301	0/0:44,0:11:26.81:0,27,413	0/0:15,1:14:11.93:0,12,308	0/0:17,1:16:36:0,36,459	0/0:37,4:34:24.28:0,24,916	0/0:43,2:29:73.54:0,74,1512	0/1:29,5:32:66.58:67,0,564	0/0:43,0:42:99:0,114,2372	0/0:12,1:13:18.05:0,18,336	0/0:58,0:56:84.88:0,85,1739	0/1:24,3:26:99:106,0,417	0/1:35,3:36:9.65:10,0,449	0/0:34,0:34:47.29:0,47,1153	0/0:45,0:45:58.07:0,58,1420	0/0:37,1:37:33.52:0,34,1771	0/1:20,1:17:22.15:22,0,709	0/0:31,0:13:31.89:0,32,487	0/0:11,1:10:9.97:0,10,199	0/0:114,6:106:45.94:0,46,1356	0/0:21,4:23:14.92:0,15,240	0/0:8,1:8:13.80:0,14,199	0/0:25,3:25:30.37:0,30,584	0/0:12,0:10:11.91:0,12,114	0/0:45,0:39:99:0,107,2406	0/0:23,0:23:47.30:0,47,967	0/0:5,0:4:7.68:0,8,196
chr10	16098628	.	C	CTG	3953.82	PASS	AB=1.000;AC=38;AF=0.679;AN=56;BaseQRankSum=-7.005;DP=901;FS=1.294;HRun=0;HaplotypeScore=263.2720;InbreedingCoeff=0.1460;MQ=39.44;MQ0=33;MQRankSum=3.379;QD=5.30;ReadPosRankSum=1.104;VQSLOD=3.0283;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:24:8.29:8,0,64	1/1:3,0:3:6.02:92,6,0	0/0:41,0:10:11.46:0,11,119	0/0:47,0:11:18.90:0,19,153	1/1:15,0:15:8.75:71,9,0	1/1:20,0:17:8.82:130,9,0	1/1:38,0:31:22.10:248,22,0	0/1:45,0:27:14.28:14,0,79	0/1:30,0:29:21.69:195,0,22	1/1:51,0:49:75.71:727,76,0	1/1:13,0:13:10.25:99,10,0	0/0:55,0:53:35.72:0,36,261	0/1:26,0:25:14.83:208,0,15	1/1:35,0:33:15.68:167,16,0	0/1:33,0:33:14.53:15,0,20	0/1:46,0:46:27.77:28,0,154	1/1:39,0:38:36.71:362,37,0	0/1:18,0:16:32.79:33,0,49	0/1:27,0:13:48.91:49,0,54	1/1:12,0:10:6.02:93,6,0	1/1:110,13:102:29.82:391,30,0	1/1:27,0:23:8.87:110,9,0	1/1:10,0:9:6.02:91,6,0	1/1:25,2:25:14.93:200,15,0	0/0:12,0:9:2.93:0,3,24	1/1:55,0:46:10.50:525,11,0	0/1:21,0:21:2.12:92,0,2	0/1:5,0:4:3.96:6,0,4
chr10	16098632	.	GTGTGTGTA	G	5377.31	PASS	AB=0.993;AC=35;AF=0.625;AN=56;BaseQRankSum=-6.627;DP=885;FS=16.456;HRun=0;HaplotypeScore=281.7558;InbreedingCoeff=-0.1247;MQ=37.74;MQ0=34;MQRankSum=0.688;QD=6.83;ReadPosRankSum=-4.140;VQSLOD=1.6947;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:23,3:24:21.94:300,22,0	0/1:3,0:3:4.13:4,0,32	0/0:43,0:8:12.15:0,12,196	0/0:50,0:11:9.78:0,10,180	0/1:14,0:14:5.47:5,0,119	0/1:18,0:15:18.32:78,0,18	0/1:34,0:28:32.24:78,0,32	0/1:46,0:28:88.60:217,0,89	0/1:29,0:27:97.75:155,0,98	0/1:52,0:50:81.72:82,0,1278	0/1:12,0:12:58.86:59,0,69	1/1:40,13:51:67.11:1100,67,0	0/1:26,0:25:87.18:112,0,87	0/1:29,0:27:51.18:102,0,51	1/1:29,5:34:42.03:575,42,0	1/1:29,14:43:43.34:1081,43,0	0/1:34,0:34:99:121,0,484	0/1:15,2:14:15.58:250,0,16	0/1:26,0:13:57.29:65,0,57	1/1:12,0:10:6.49:144,6,0	1/1:126,0:101:34.19:367,34,0	1/1:25,0:21:8.93:67,9,0	1/1:11,0:9:6.02:105,6,0	1/1:26,0:24:15.36:194,15,0	1/1:7,5:9:6.01:86,6,0	0/1:57,0:48:29.97:30,0,677	0/1:22,0:22:0.68:1,0,536	0/0:5,0:4:5.75:0,6,53
chr10	16098636	.	GTGTA	G	3548.32	PASS	AB=0.997;AC=38;AF=0.679;AN=56;BaseQRankSum=-2.776;DP=879;FS=15.487;HRun=0;HaplotypeScore=262.5501;InbreedingCoeff=-0.0984;MQ=37.10;MQ0=40;MQRankSum=-0.094;QD=4.67;ReadPosRankSum=-7.185;VQSLOD=-0.1670;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:26:20.74:155,21,0	1/1:3,0:3:3.63:14,4,0	0/0:46,0:8:11.79:0,12,104	0/0:50,0:10:8.28:0,8,163	0/1:15,0:15:14.84:15,0,56	1/1:18,0:15:4.86:100,5,0	0/1:33,0:26:14.11:91,0,14	1/1:45,1:26:9.43:270,9,0	0/1:29,0:28:31.16:95,0,31	0/1:52,0:50:99:120,0,805	0/1:13,0:13:28.29:59,0,28	1/1:59,0:57:0.47:412,0,0	0/1:22,0:21:23.22:109,0,23	1/1:26,0:24:5.92:102,6,0	1/1:34,0:34:40.67:272,41,0	1/1:49,0:49:48.12:611,48,0	0/1:30,0:30:99:120,0,284	0/1:17,0:14:17.22:156,0,17	0/1:22,1:12:23.83:92,0,24	0/1:11,0:9:0.28:35,0,0	1/1:112,5:90:35.75:290,36,0	1/1:26,0:22:8.89:67,9,0	1/1:9,0:8:5.57:32,6,0	1/1:23,0:22:14.83:107,15,0	1/1:17,0:13:6.08:34,6,0	0/1:55,0:48:99:185,0,343	0/0:21,0:22:0.51:0,1,431	0/1:3,0:2:6.19:6,0,44
chr10	16098638	.	GTA	G	3742.07	PASS	AB=0.983;AC=42;AF=0.750;AN=56;BaseQRankSum=-3.328;DP=850;FS=12.846;HRun=0;HaplotypeScore=243.3002;InbreedingCoeff=-0.2359;MQ=36.92;MQ0=40;MQRankSum=1.948;QD=4.65;ReadPosRankSum=-8.545;VQSLOD=-0.7345;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:26,1:25:9.56:96,10,0	1/1:3,0:3:2.84:15,3,0	0/0:46,0:9:4.86:0,5,59	0/1:51,0:10:16.87:17,0,151	0/1:16,0:16:10.28:16,0,10	1/1:16,0:14:8.63:83,9,0	1/1:29,2:24:16.42:122,16,0	1/1:37,5:22:9.85:442,10,0	0/1:26,2:27:11.43:72,0,11	0/1:50,0:48:99:209,0,264	0/1:13,0:13:4.48:59,0,4	0/1:58,0:56:13.86:364,0,14	1/1:22,0:21:4.52:91,5,0	1/1:23,0:21:11.09:86,11,0	1/1:35,0:35:39.60:260,40,0	1/1:53,0:52:45.67:528,46,0	0/1:26,1:28:78.41:157,0,78	0/1:15,1:14:26.60:151,0,27	0/1:20,1:10:23.57:106,0,24	1/1:11,0:9:0.28:37,0,0	1/1:98,9:85:35.59:268,36,0	1/1:22,4:22:8.94:67,9,0	1/1:8,1:8:5.96:44,6,0	1/1:18,2:19:14.86:107,15,0	1/1:18,0:13:2.81:25,3,0	0/1:50,0:43:84.06:278,0,84	0/1:21,0:21:21.70:22,0,139	0/1:3,0:2:19.31:20,0,19
chr10	16098640	.	ATG	A	635.83	PASS	AB=0.988;AC=22;AF=0.393;AN=56;BaseQRankSum=1.135;DP=833;FS=2.070;HRun=0;HaplotypeScore=256.4854;InbreedingCoeff=-0.1266;MQ=36.70;MQ0=42;MQRankSum=0.024;QD=0.97;ReadPosRankSum=-1.990;VQSLOD=2.4119;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:24:2.58:52,0,3	0/0:3,0:3:4.51:0,5,23	0/0:47,0:9:2.49:0,2,20	0/1:50,0:9:21.57:22,0,84	0/0:16,0:16:1.36:0,1,3	0/0:14,0:13:1.43:0,1,19	0/1:23,0:18:12.80:13,0,22	1/1:44,0:23:1.13:127,1,0	0/0:25,0:24:19.50:0,19,147	0/1:50,3:50:88.79:89,0,179	0/0:12,1:13:2.60:0,3,10	0/1:58,0:56:76.57:77,0,184	0/0:19,0:20:3.37:0,3,78	0/1:22,0:20:5.76:6,0,28	1/1:36,0:34:5.44:19,5,0	0/1:53,0:52:21.92:113,0,22	0/1:26,1:27:2.88:3,0,72	0/1:18,0:15:18.17:18,0,66	0/1:15,0:9:10.92:27,0,11	0/1:11,0:9:2.84:10,0,3	1/1:111,0:86:3.23:24,3,0	0/1:26,0:23:0.01:0,0,0	0/1:9,0:8:0:0,0,0	0/1:20,0:19:0.02:0,0,0	0/0:21,0:16:5.60:0,6,24	0/1:42,3:38:99:169,0,132	0/0:21,0:21:27.56:0,28,126	0/1:3,0:2:1.55:2,0,18
chr10	16098641	.	T	TGC	511.66	PASS	AB=0.926;AC=9;AF=0.161;AN=56;BaseQRankSum=2.718;DP=837;FS=9.526;HRun=0;HaplotypeScore=269.0482;InbreedingCoeff=-0.0734;MQ=36.46;MQ0=41;MQRankSum=-2.234;QD=3.14;ReadPosRankSum=0.831;VQSLOD=0.3617;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:25:18:0,18,139	1/1:3,0:3:3.47:9,3,0	0/0:47,0:9:15.79:0,16,121	0/0:51,0:9:5.49:0,5,80	0/0:16,0:16:9.01:0,9,108	0/1:13,2:14:42.63:43,0,65	0/1:20,3:18:35.30:137,0,35	0/1:44,1:23:55.08:55,0,255	0/1:25,0:24:99:105,0,107	0/0:55,0:52:99:0,116,1170	0/0:12,0:12:6.01:0,6,68	0/0:59,0:57:79.28:0,79,677	0/1:16,3:19:52.35:176,0,52	0/1:18,3:19:50.82:86,0,51	0/0:37,0:35:32.62:0,33,233	0/0:52,0:51:74.33:0,74,581	0/0:27,0:27:53.96:0,54,569	0/0:19,0:16:22.86:0,23,211	0/1:12,0:6:33.30:33,0,56	0/0:11,0:9:5.54:0,6,36	0/0:106,3:85:23.77:0,24,148	0/0:27,0:23:2.15:0,2,23	0/0:9,0:8:5.66:0,6,45	0/0:19,2:20:13.48:0,13,93	0/0:23,0:18:9.88:0,10,65	0/0:47,0:39:92.91:0,93,813	0/0:21,0:21:47.09:0,47,551	0/0:3,0:2:5.38:0,5,51
chr10	16098650	.	G	GCC	674.06	PASS	AB=0.981;AC=23;AF=0.411;AN=56;BaseQRankSum=1.535;DP=788;FS=33.864;HRun=0;HaplotypeScore=274.3695;InbreedingCoeff=0.0584;MQ=34.69;MQ0=40;MQRankSum=2.095;QD=1.31;ReadPosRankSum=-3.681;VQSLOD=1.1548;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:24:19.86:20,0,25	0/0:3,0:3:5.87:0,6,36	0/0:36,0:5:12.01:0,12,156	0/1:45,0:8:4.51:5,0,71	0/0:17,0:17:8.90:0,9,112	1/1:10,1:10:6.45:54,6,0	1/1:20,1:15:9.72:156,10,0	0/1:33,0:17:28.92:29,0,148	0/1:22,0:21:70.76:91,0,71	0/0:67,0:59:99:0,144,1858	0/0:16,0:15:2.94:0,3,49	0/1:66,0:65:16.29:16,0,347	0/1:16,0:15:80.68:89,0,81	0/1:16,0:14:11.14:51,0,11	0/1:44,1:40:64.19:64,0,66	0/1:49,2:50:99:106,0,258	0/0:28,0:27:26.38:0,26,573	0/0:16,0:14:8:0,8,272	0/0:13,0:6:7.76:0,8,45	1/1:6,0:5:6.47:52,6,0	0/1:76,10:67:3.12:75,0,3	1/1:22,0:18:0.28:1,0,0	1/1:7,0:6:3.27:14,3,0	1/1:17,1:17:3.11:12,3,0	0/1:21,1:19:1.61:2,0,48	0/0:52,0:43:91.99:0,92,1023	0/0:21,0:20:45.01:0,45,650	0/0:3,0:2:6.02:0,6,93
chr10	16098662	.	GTGCC	G	1196.76	PASS	AB=0.989;AC=22;AF=0.393;AN=56;BaseQRankSum=5.569;DP=731;FS=9.725;HRun=0;HaplotypeScore=262.1628;InbreedingCoeff=-0.3140;MQ=30.08;MQ0=40;MQRankSum=-3.097;QD=2.06;ReadPosRankSum=3.931;VQSLOD=1.0967;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:24:52.92:53,0,146	1/1:4,0:4:5.95:49,6,0	0/0:33,0:3:6.02:0,6,91	0/1:33,0:4:6.19:6,0,34	0/0:19,0:18:6.01:0,6,79	0/0:5,0:4:7.51:0,8,48	0/0:22,0:15:10.92:0,11,146	0/1:27,0:11:20.40:20,0,169	0/1:17,0:16:8.51:9,0,56	0/1:60,1:52:99:403,0,509	0/0:15,0:14:2.63:0,3,35	0/1:65,0:64:22.02:22,0,845	0/1:17,0:16:8.75:9,0,120	0/1:12,1:12:14.82:15,0,46	0/1:46,0:40:13.51:14,0,178	0/1:55,0:54:93.94:94,0,688	0/1:20,0:19:85.61:86,0,174	0/1:16,0:14:16.37:16,0,365	1/1:7,0:3:1.55:4,2,0	0/0:6,0:4:5.51:0,6,85	0/1:81,0:62:1.36:1,0,89	1/1:22,0:18:2.53:13,3,0	0/0:6,1:5:0.47:0,0,1	0/0:17,0:16:0.47:0,0,1	0/0:26,0:22:13.35:0,13,151	0/1:43,1:37:99:363,0,262	0/1:21,1:21:99:138,0,166	0/1:3,0:2:15.29:27,0,15
chr10	16098665	.	CCTGT	C	1432.97	PASS	AB=0.982;AC=19;AF=0.339;AN=56;BaseQRankSum=5.213;DP=707;FS=23.697;HRun=0;HaplotypeScore=251.2478;InbreedingCoeff=-0.2297;MQ=30.00;MQ0=39;MQRankSum=-4.142;QD=2.94;ReadPosRankSum=5.156;VQSLOD=0.9519;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:24:14.98:15,0,252	1/1:2,0:2:2.94:18,3,0	0/0:33,0:3:5.95:0,6,81	0/1:32,0:4:0.35:0,0,49	0/0:17,0:17:5.98:0,6,47	0/0:4,0:3:8.72:0,9,50	0/0:23,0:16:21.57:0,22,144	0/1:21,0:7:14.06:14,0,106	0/1:19,0:18:39.87:42,0,40	0/1:56,3:51:99:599,0,260	0/0:14,1:14:2.75:0,3,26	0/0:63,0:62:35.32:0,35,1041	0/0:17,1:17:5.86:0,6,63	0/1:13,0:12:4.89:5,0,15	0/1:48,0:42:15:15,0,210	0/1:52,1:52:41.83:42,0,825	0/1:18,0:17:62.05:141,0,62	0/1:14,1:13:19.56:20,0,395	0/0:4,0:1:2.92:0,3,17	0/0:7,0:5:5.51:0,6,91	0/1:76,1:57:4.05:4,0,93	1/1:20,0:17:2.60:32,3,0	0/0:7,1:5:0:0,0,0	0/1:14,1:14:0.01:0,0,0	0/0:27,0:23:13.63:0,14,173	0/1:39,2:35:99:484,0,168	0/1:21,0:20:99:136,0,110	0/1:3,0:2:8.19:8,0,12
chr10	16098666	.	CTGTG	C	2476.74	PASS	AB=0.803;AC=19;AF=0.380;AN=50;BaseQRankSum=2.123;DP=735;FS=9.068;HRun=0;HaplotypeScore=254.0409;InbreedingCoeff=-0.0302;MQ=29.66;MQ0=43;MQRankSum=-2.486;QD=5.29;ReadPosRankSum=3.474;VQSLOD=1.1220;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:27,1:28:38.89:39,0,246	1/1:1,1:2:2.98:21,3,0	0/0:33,0:3:3.01:0,3,62	0/0:36,0:4:3.48:0,3,43	./.	0/0:2,0:3:5.54:0,6,25	0/0:18,0:16:14.86:0,15,93	0/1:18,0:7:41.74:43,0,42	1/1:12,2:17:8.60:96,9,0	0/1:34,25:52:45.86:972,0,46	0/1:8,4:14:0:0,0,0	0/0:57,2:63:10.63:0,11,1017	0/0:16,1:17:2.81:0,3,17	0/0:16,1:14:4.91:0,5,20	0/1:37,7:45:28.33:28,0,207	0/1:47,4:52:99:104,0,819	1/1:13,6:18:22.93:285,23,0	0/1:14,0:13:20.18:20,0,357	./.	0/0:7,0:5:5.51:0,6,83	0/1:53,2:57:10.22:10,0,78	1/1:20,2:18:3:51,3,0	./.	0/1:12,1:14:0.01:0,0,0	0/0:24,4:24:4.40:0,4,156	0/1:23,15:35:34.30:758,0,34	0/1:15,7:21:6.08:190,0,6	0/0:3,0:2:2.22:0,2,7
chr10	16098671	.	T	TAC	169.12	PASS	AB=0.984;AC=15;AF=0.268;AN=56;BaseQRankSum=4.324;DP=798;FS=11.805;HRun=0;HaplotypeScore=275.7113;InbreedingCoeff=0.0485;MQ=28.61;MQ0=63;MQRankSum=-2.660;QD=0.47;ReadPosRankSum=-1.837;VQSLOD=0.1594;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:29:19.71:0,20,265	1/1:2,0:2:0.47:1,0,0	0/0:44,0:3:5.78:0,6,82	0/0:44,0:5:6.49:0,6,87	0/0:17,1:17:3.01:0,3,46	0/0:6,0:4:5.21:0,5,30	0/1:20,0:15:1.77:2,0,73	0/1:24,1:10:61.55:97,0,62	1/1:18,0:18:3.11:56,3,0	0/0:70,0:55:17.28:0,17,913	0/0:18,0:16:2.94:0,3,46	0/1:66,1:67:5.61:6,0,949	0/0:17,0:14:3.66:0,4,25	0/1:16,0:12:7.56:8,0,37	0/0:56,0:50:16.79:0,17,247	0/0:58,0:57:21.30:0,21,794	0/0:21,0:20:22.03:0,22,265	0/0:16,0:14:20.80:0,21,323	0/0:7,0:1:3.01:0,3,40	0/0:8,0:5:2.77:0,3,48	0/1:80,0:57:6.16:6,0,75	1/1:21,0:17:1.08:3,1,0	0/1:10,0:7:0:0,0,0	0/1:20,0:15:0:0,0,0	0/1:27,1:24:38.37:38,0,136	0/1:48,1:42:70.83:71,0,622	0/0:20,0:19:38.89:0,39,401	0/0:3,0:2:6.02:0,6,85
chr10	16098678	.	G	GCC	102.27	PASS	AB=0.967;AC=16;AF=0.296;AN=54;BaseQRankSum=5.151;DP=830;FS=1.351;HRun=0;HaplotypeScore=271.1604;InbreedingCoeff=-0.1845;MQ=28.63;MQ0=76;MQRankSum=-0.573;QD=0.22;ReadPosRankSum=-4.341;VQSLOD=1.4090;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:32,3:33:4.89:5,0,221	0/0:3,0:3:2.74:0,3,12	0/0:51,0:5:2.38:0,2,79	0/0:52,0:4:6.44:0,6,61	1/1:19,0:19:0.47:1,0,0	0/0:6,0:4:5.20:0,5,30	0/1:25,0:20:13.61:14,0,41	0/1:27,0:12:25.84:26,0,140	0/0:14,0:14:3.08:0,3,46	0/0:72,1:60:38.60:0,39,816	0/1:17,0:15:0.07:0,0,0	0/1:66,2:64:11.85:12,0,850	0/1:16,0:12:15.48:21,0,15	0/0:17,0:12:7.30:0,7,53	0/1:54,1:51:9.32:9,0,219	0/1:53,2:54:78.19:78,0,608	0/0:21,0:18:2.53:0,3,213	0/1:17,1:16:6.35:6,0,362	./.	0/0:11,0:8:2.77:0,3,48	0/1:66,5:50:35.74:36,0,71	0/0:22,0:17:2.74:0,3,12	1/1:10,0:7:0.47:1,0,0	0/1:17,1:12:0:0,0,0	0/1:31,1:28:15.66:16,0,136	0/0:54,0:45:61.36:0,61,790	0/0:18,0:17:20.50:0,20,103	0/0:1,0:1:3.01:0,3,43
chr10	16098684	.	GCC	G	426.43	PASS	AB=0.940;AC=20;AF=0.357;AN=56;BaseQRankSum=2.088;DP=780;FS=2.049;HRun=2;HaplotypeScore=259.6852;InbreedingCoeff=-0.0965;MQ=31.27;MQ0=70;MQRankSum=-1.024;QD=0.81;ReadPosRankSum=2.232;VQSLOD=-0.6412;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:31,3:32:9.15:9,0,251	1/1:2,1:3:2.61:11,3,0	0/0:48,1:5:1.24:0,1,48	0/0:43,2:5:8.65:0,9,84	0/1:15,3:17:0:0,0,0	0/0:5,0:4:1.83:0,2,5	0/0:25,0:21:18.86:0,19,150	0/0:20,0:9:12.01:0,12,141	0/1:13,1:14:3.24:3,0,74	0/1:60,9:55:99:276,0,590	0/1:16,0:14:0:0,0,0	0/1:57,6:60:11.58:12,0,973	0/1:18,0:14:24.50:25,0,80	1/1:16,0:12:6.28:47,6,0	0/1:49,3:48:17.79:18,0,245	0/1:46,3:48:28.69:29,0,770	0/0:19,0:16:9.16:0,9,172	0/1:16,0:15:26.90:27,0,365	0/0:17,0:3:2.97:0,3,20	0/0:10,1:8:5.38:0,5,69	0/1:65,4:46:23.91:24,0,113	0/0:19,2:16:3.46:0,3,24	0/0:11,0:8:0.16:0,0,0	0/1:17,0:10:0:0,0,0	0/0:28,4:28:21.85:0,22,192	0/1:49,2:44:49.97:50,0,543	0/1:13,2:14:16.85:17,0,52	1/1:1,0:1:2.92:17,3,0
chr10	16098685	.	CCTGTGTACCT	C	1847.15	PASS	AB=0.992;AC=19;AF=0.352;AN=54;BaseQRankSum=2.001;DP=784;FS=9.724;HRun=0;HaplotypeScore=286.0730;InbreedingCoeff=-0.2411;MQ=32.58;MQ0=69;MQRankSum=-0.747;QD=3.53;ReadPosRankSum=0.316;VQSLOD=1.0226;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:32:99:134,0,307	0/0:3,0:3:1.70:0,2,5	0/0:51,0:7:8.80:0,9,221	0/0:46,0:5:8.08:0,8,163	0/1:18,0:17:0:0,0,0	0/1:5,0:4:4.07:4,0,51	0/0:27,0:23:26.28:0,26,348	0/0:21,0:10:15.05:0,15,232	0/0:15,0:15:10.82:0,11,190	0/1:66,0:53:99:591,0,1289	0/1:16,0:14:0:1,0,0	0/1:61,3:60:99:166,0,1194	0/1:18,0:14:26.86:27,0,175	0/1:17,0:12:8.10:54,0,8	0/1:53,0:49:99:113,0,307	0/1:46,1:47:99:200,0,980	0/1:19,0:16:35.82:36,0,494	0/1:16,0:15:89.02:89,0,528	0/0:17,0:3:3.01:0,3,58	0/0:11,0:8:6.38:0,6,74	0/1:69,0:47:27.73:28,0,221	0/0:21,0:16:11.25:0,11,78	1/1:11,0:8:0.21:0,0,0	./.	0/0:31,0:27:12.40:0,12,226	0/1:51,0:44:99:491,0,1265	0/1:16,0:15:46.21:46,0,149	1/1:1,0:1:2.04:6,2,0
chr10	16098686	.	CTGTGTACCTG	C	1797.04	PASS	AB=0.968;AC=20;AF=0.370;AN=54;BaseQRankSum=2.196;DP=792;FS=4.150;HRun=0;HaplotypeScore=290.8722;InbreedingCoeff=-0.2210;MQ=32.72;MQ0=69;MQRankSum=-1.119;QD=3.34;ReadPosRankSum=0.017;VQSLOD=2.0890;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:32,1:33:99:221,0,229	1/1:3,0:3:2.50:9,2,0	0/0:50,0:7:8.92:0,9,217	0/0:44,0:5:8.21:0,8,150	0/1:18,0:17:0:0,0,0	0/0:5,0:4:7.27:0,7,55	0/0:27,0:23:9.44:0,9,292	0/0:21,0:10:14.75:0,15,166	0/0:16,0:16:11.69:0,12,160	0/1:68,0:54:99:446,0,1000	0/1:16,0:14:0:1,0,0	0/1:61,3:60:99:193,0,921	0/0:20,0:16:0.96:0,1,159	0/1:17,0:12:8.39:62,0,8	0/1:47,7:50:99:132,0,237	0/1:41,6:47:99:238,0,750	0/1:18,0:15:21.63:22,0,434	0/1:15,0:15:99:135,0,393	0/0:17,0:3:3.01:0,3,62	0/0:13,0:10:5.20:0,5,45	0/1:69,0:46:26.06:26,0,176	0/0:21,0:16:10.12:0,10,61	1/1:11,0:8:0.47:1,0,0	./.	0/1:27,5:28:57.36:57,0,140	0/1:53,0:45:99:361,0,1061	0/1:16,0:15:29.19:29,0,130	1/1:1,0:1:0.89:2,1,0
chr10	16098688	.	GTGTACC	G	2214.86	PASS	AB=0.953;AC=26;AF=0.464;AN=56;BaseQRankSum=-0.039;DP=803;FS=2.447;HRun=0;HaplotypeScore=275.8631;InbreedingCoeff=-0.3023;MQ=32.63;MQ0=72;MQRankSum=-2.527;QD=3.56;ReadPosRankSum=-0.354;VQSLOD=2.2252;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:34,0:33:42.69:43,0,262	1/1:3,0:3:0.89:2,1,0	0/0:55,0:7:13.54:0,14,230	0/0:46,0:5:11.65:0,12,161	0/1:15,3:17:0.05:0,0,0	0/1:6,0:5:23.97:24,0,45	0/0:27,0:23:9.14:0,9,176	0/0:21,0:11:17.36:0,17,249	0/1:17,0:17:80.13:80,0,104	0/1:60,8:54:99:774,0,1070	0/1:14,2:14:0:1,0,0	0/1:64,0:60:68.79:69,0,934	0/1:20,0:16:22.54:81,0,23	1/1:18,0:13:6.43:62,6,0	0/1:54,0:50:76.46:76,0,218	0/1:48,0:47:63.10:63,0,700	0/1:16,2:15:42.38:42,0,396	0/1:16,0:15:50.55:51,0,406	0/0:18,0:3:3.01:0,3,41	0/0:13,0:10:3.98:0,4,40	0/1:69,0:46:12.33:12,0,210	0/1:21,0:16:25.69:64,0,26	1/1:10,1:8:0.33:0,0,0	0/1:18,0:11:0:0,0,0	0/1:33,0:29:9.26:9,0,150	0/1:42,12:46:99:752,0,1123	0/1:12,4:15:99:146,0,118	1/1:1,0:1:1.82:5,2,0
chr10	16098690	.	GTACC	G	1130.77	PASS	AB=0.944;AC=20;AF=0.357;AN=56;BaseQRankSum=1.014;DP=799;FS=3.268;HRun=0;HaplotypeScore=273.2643;InbreedingCoeff=-0.2879;MQ=32.64;MQ0=72;MQRankSum=-2.408;QD=2.12;ReadPosRankSum=0.079;VQSLOD=1.9250;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:32,2:33:70.03:70,0,261	0/0:3,0:3:0.89:0,1,2	0/0:56,0:7:13.09:0,13,173	0/0:44,0:5:8.27:0,8,115	0/0:16,1:16:0:0,0,0	0/0:6,0:5:6.48:0,6,56	0/1:27,0:23:18.44:18,0,188	0/0:21,0:11:17.81:0,18,266	0/1:17,1:18:48.69:49,0,143	0/1:58,9:53:99:416,0,1211	0/1:14,2:14:0:0,0,0	0/1:63,2:61:78.24:78,0,853	0/0:20,0:16:4.21:0,4,148	0/1:17,1:13:32.40:32,0,37	0/1:49,3:48:37.03:37,0,168	0/1:45,1:46:69.67:70,0,676	0/1:18,0:15:20.34:20,0,428	0/1:16,0:15:30.66:31,0,432	0/0:18,0:3:3:0,3,27	0/0:13,0:10:6.46:0,6,50	0/0:66,1:44:5.81:0,6,196	0/1:18,3:16:7.02:7,0,29	1/1:10,1:8:0.06:0,0,0	0/1:19,1:13:0.07:0,0,0	0/1:31,2:29:11.24:11,0,157	0/1:52,2:46:99:319,0,1191	0/1:14,1:15:89.58:90,0,125	1/1:1,0:1:2.96:19,3,0
chr10	16098691	.	TAC	T	426.01	PASS	AB=0.966;AC=21;AF=0.375;AN=56;BaseQRankSum=2.326;DP=792;FS=9.199;HRun=0;HaplotypeScore=267.3154;InbreedingCoeff=-0.1763;MQ=32.81;MQ0=72;MQRankSum=0.076;QD=0.77;ReadPosRankSum=1.792;VQSLOD=1.1418;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:34,0:33:38.74:39,0,223	1/1:2,1:3:2.67:11,3,0	0/0:55,0:7:6.84:0,7,189	0/0:44,0:5:8.85:0,9,125	0/1:16,0:15:0:0,0,0	0/1:7,0:6:9.72:10,0,46	0/0:26,1:24:32.56:0,33,311	0/0:20,0:11:14.40:0,14,228	0/0:16,0:16:12.37:0,12,152	0/1:67,1:54:99:206,0,1197	0/1:15,0:13:0:0,0,0	0/1:59,2:60:50.50:50,0,751	0/0:20,0:16:16.10:0,16,223	0/1:17,1:13:35.15:35,0,51	0/1:49,2:48:4.98:5,0,168	0/1:43,4:46:43.99:44,0,617	0/1:17,1:15:8.39:8,0,328	0/1:13,2:14:27.49:27,0,343	0/0:19,0:4:2.95:0,3,56	0/0:13,0:10:5.85:0,6,49	0/1:65,0:42:4.22:4,0,165	0/0:20,1:16:2.31:0,2,36	0/1:10,1:8:0.26:0,0,0	0/1:19,0:12:0.01:0,0,0	0/1:31,1:28:3.72:4,0,183	0/1:54,0:46:53.57:54,0,1195	0/1:15,0:14:33.21:33,0,143	1/1:0,1:1:3.01:31,3,0
chr10	16098693	.	CCT	C	145.55	PASS	AB=0.989;AC=15;AF=0.268;AN=56;BaseQRankSum=2.776;DP=844;FS=1.892;HRun=0;HaplotypeScore=285.5395;InbreedingCoeff=-0.0589;MQ=33.18;MQ0=77;MQRankSum=-0.635;QD=0.39;ReadPosRankSum=3.270;VQSLOD=2.4311;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:36,0:36:29.09:29,0,97	1/1:3,0:3:2.42:9,2,0	0/0:57,0:7:7.60:0,8,151	0/0:45,0:5:1.92:0,2,44	0/0:20,0:19:9.60:0,10,70	0/0:7,0:6:3.78:0,4,27	0/0:29,1:26:27.09:0,27,189	0/0:21,0:11:17.82:0,18,203	0/0:19,0:18:21.62:0,22,196	0/0:71,0:57:1.23:0,1,851	0/1:15,0:13:0:0,0,0	0/1:60,0:59:52.45:52,0,350	0/0:21,0:17:9.13:0,9,108	0/1:18,0:13:17.13:17,0,52	0/1:51,0:48:19.47:19,0,96	0/1:46,0:45:76.51:77,0,312	0/0:19,0:16:7.43:0,7,293	0/1:16,0:15:16.22:16,0,178	0/0:23,0:8:14:0,14,80	0/0:14,0:11:2.75:0,3,11	0/0:76,2:56:16.09:0,16,102	0/0:26,0:20:13.53:0,14,102	0/1:12,0:9:0.30:0,0,0	0/0:20,2:15:2.73:0,3,23	0/1:31,1:28:39.79:40,0,77	0/1:57,0:48:3.64:4,0,781	0/1:16,0:15:2.57:3,0,85	1/1:1,0:1:2.74:12,3,0
chr10	16098694	.	CTG	C	560.26	PASS	AB=0.935;AC=14;AF=0.250;AN=56;BaseQRankSum=2.252;DP=877;FS=1.226;HRun=0;HaplotypeScore=289.3513;InbreedingCoeff=-0.2016;MQ=33.16;MQ0=80;MQRankSum=-0.931;QD=1.48;ReadPosRankSum=1.264;VQSLOD=2.0843;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:39,1:38:42.17:111,0,42	1/1:3,0:3:0.81:2,1,0	0/0:56,0:7:10.38:0,10,112	0/0:45,0:5:1.88:0,2,15	0/0:22,0:21:11.77:0,12,150	0/0:7,1:7:8.84:0,9,57	0/1:30,1:27:31.41:31,0,32	0/0:24,0:12:11.53:0,12,144	0/1:18,1:19:0.01:0,0,137	0/0:75,1:59:35.87:0,36,657	0/0:16,0:14:2.63:0,3,24	0/1:56,6:58:99:126,0,139	0/1:20,0:17:11.99:12,0,28	0/1:17,1:13:3.16:3,0,37	0/1:45,3:47:42.01:95,0,42	0/1:44,3:46:99:183,0,116	0/1:19,1:17:10.76:11,0,181	0/1:15,3:17:61.72:94,0,62	0/0:25,0:9:17.88:0,18,110	0/0:16,0:13:2.59:0,3,16	0/0:83,1:60:8.67:0,9,37	0/0:24,0:20:10.12:0,10,67	0/1:12,0:10:0.04:0,0,0	0/0:21,0:15:2.23:0,2,9	0/1:33,0:29:16.03:19,0,16	0/0:57,0:52:1.40:0,1,527	0/0:15,0:15:0.45:0,0,72	0/0:1,0:1:0:0,0,0
chr10	16098696	.	G	GTGTGTGTGTGTGCC	5117.86	PASS	AB=0.975;AC=16;AF=0.286;AN=56;BaseQRankSum=2.075;DP=911;FS=8.834;HRun=0;HaplotypeScore=361.5951;InbreedingCoeff=-0.2023;MQ=33.29;MQ0=84;MQRankSum=-2.852;QD=8.62;ReadPosRankSum=5.431;VQSLOD=1.8576;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:26,12:41:22.58:336,0,23	1/1:3,0:3:2.97:92,3,0	0/0:58,0:7:7.97:0,8,80	0/1:48,0:5:3.05:10,0,3	0/0:24,0:22:15.06:0,15,147	0/0:10,0:8:0.98:0,1,37	0/0:32,0:27:20.21:0,20,222	0/0:26,0:14:5.13:0,5,85	0/0:21,0:20:2.95:0,3,111	0/1:78,0:61:63.23:833,0,63	0/0:16,0:14:3.46:0,3,25	0/1:63,0:59:99:830,0,135	0/0:21,0:16:0.86:0,1,201	0/1:19,0:14:61.71:66,0,62	0/1:51,0:47:52.01:368,0,52	0/1:48,0:48:49.96:1064,0,50	0/1:20,0:17:99:184,0,127	0/1:20,0:19:99:325,0,167	0/0:28,0:10:16.91:0,17,62	0/0:17,0:14:5.03:0,5,22	0/1:91,0:65:14.41:14,0,135	0/0:27,0:21:1.84:0,2,54	0/0:13,0:10:0.16:0,0,0	0/0:23,0:16:5.02:0,5,19	1/1:32,0:28:13.56:148,14,0	0/1:61,0:52:99:783,0,103	0/1:16,0:15:40.49:64,0,40	0/0:1,0:1:3.01:0,3,40
chr10	16098699	.	T	TAC	352.17	PASS	AB=0.922;AC=8;AF=0.143;AN=56;BaseQRankSum=2.191;DP=951;FS=13.020;HRun=0;HaplotypeScore=310.9325;InbreedingCoeff=0.0886;MQ=33.42;MQ0=94;MQRankSum=-1.050;QD=1.80;ReadPosRankSum=-3.391;VQSLOD=-0.1099;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:40:28.17:0,28,314	0/0:4,0:4:3.01:0,3,41	0/0:60,0:7:1.74:0,2,167	0/0:50,0:5:12.25:0,12,108	0/0:23,0:21:14.76:0,15,185	0/0:13,0:11:0.20:0,0,40	0/1:26,6:28:73.87:297,0,74	0/0:30,0:17:28.29:0,28,382	0/1:23,0:20:40:40,0,162	0/0:79,0:62:99:0,147,1841	0/0:17,0:15:5.95:0,6,86	0/0:65,0:62:64.33:0,64,741	0/1:20,2:17:24.41:83,0,24	0/0:20,2:16:8.44:0,8,91	0/0:54,0:50:20.58:0,21,233	0/0:50,0:49:52.08:0,52,644	0/0:22,0:19:33.36:0,33,407	0/0:21,0:20:35.99:0,36,432	0/0:30,0:11:21.71:0,22,161	1/1:15,1:13:3.91:13,4,0	0/1:84,5:64:34.42:34,0,203	0/0:26,0:19:11.57:0,12,77	1/1:13,0:9:0.20:0,0,0	0/0:26,1:17:5.14:0,5,22	0/0:35,0:30:19.10:0,19,146	0/0:65,0:56:99:0,137,1693	0/0:17,0:16:11.38:0,11,186	0/0:2,0:2:6.01:0,6,68
chr10	16098700	.	G	GCC	486.85	PASS	AB=0.959;AC=9;AF=0.161;AN=56;BaseQRankSum=1.959;DP=969;FS=12.002;HRun=0;HaplotypeScore=314.0918;InbreedingCoeff=0.0925;MQ=33.30;MQ0=96;MQRankSum=-2.150;QD=2.28;ReadPosRankSum=-3.480;VQSLOD=0.5983;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:41:28.27:0,28,330	0/0:4,0:4:3.01:0,3,41	0/0:61,0:7:11.19:0,11,169	0/0:49,0:5:11.95:0,12,95	0/0:23,0:21:14.75:0,15,184	0/1:11,2:11:30.74:32,0,31	0/1:33,1:29:69.39:324,0,69	0/0:34,0:17:30.08:0,30,410	0/1:24,0:21:58.80:59,0,148	0/0:81,0:64:99:0,146,1794	0/0:17,0:15:5.95:0,6,90	0/0:64,0:61:32.05:0,32,673	0/1:21,1:17:27.55:117,0,28	0/0:22,1:18:11.16:0,11,94	0/0:54,0:50:14.43:0,14,180	0/0:50,0:49:50.77:0,51,591	0/0:24,0:21:32.26:0,32,387	0/0:21,0:20:36.02:0,36,439	0/0:31,0:11:24.69:0,25,186	1/1:14,2:13:5.02:44,5,0	0/1:91,0:66:37.15:37,0,184	0/0:26,0:19:11.08:0,11,74	1/1:13,0:9:0.20:0,0,0	0/0:26,1:17:5.31:0,5,41	0/0:35,0:31:16.13:0,16,127	0/0:67,0:58:99:0,137,1692	0/0:18,0:17:10.88:0,11,189	0/0:2,0:2:5.99:0,6,61
chr10	16098704	.	G	GCA	1647.38	PASS	AB=0.878;AC=16;AF=0.286;AN=56;BaseQRankSum=-2.784;DP=1014;FS=0.000;HRun=0;HaplotypeScore=310.9935;InbreedingCoeff=-0.1548;MQ=32.90;MQ0=104;MQRankSum=0.233;QD=3.69;ReadPosRankSum=-4.236;VQSLOD=1.2973;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:41,3:43:25.81:26,0,277	0/0:4,0:4:3.01:0,3,39	0/0:59,0:6:5.70:0,6,141	0/0:47,0:5:8.83:0,9,77	0/0:24,0:23:17.59:0,18,201	0/1:12,2:12:43.82:52,0,44	0/1:31,4:30:92.69:157,0,93	0/0:45,1:23:39.10:0,39,529	0/1:17,5:20:99:199,0,117	0/0:80,0:63:99:0,146,1749	0/0:17,0:15:5.82:0,6,61	0/0:66,0:63:67.97:0,68,804	0/1:24,5:21:30.35:220,0,30	0/1:22,3:19:46.66:47,0,114	0/0:55,0:51:23.32:0,23,271	0/0:52,0:51:58.51:0,59,717	0/1:24,1:22:16.96:17,0,395	0/1:21,1:22:18.72:19,0,422	0/1:31,5:12:73.56:313,0,74	0/1:13,4:14:5.09:54,0,5	0/1:85,12:73:90.88:379,0,91	0/1:24,4:21:35.59:189,0,36	1/1:12,2:10:0.20:0,0,0	1/1:27,5:21:8.90:130,9,0	0/0:33,0:29:18.70:0,19,198	0/0:64,0:57:99:0,116,1660	0/0:17,0:16:12.21:0,12,236	0/0:2,0:2:6.02:0,6,82
chr10	16098706	.	G	GCC	827.76	PASS	AB=0.971;AC=17;AF=0.304;AN=56;BaseQRankSum=0.209;DP=1037;FS=1.718;HRun=0;HaplotypeScore=325.3509;InbreedingCoeff=-0.1929;MQ=33.52;MQ0=99;MQRankSum=-1.576;QD=1.45;ReadPosRankSum=-2.662;VQSLOD=1.2326;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:44:18.98:0,19,261	0/0:4,0:4:2.80:0,3,13	0/0:54,0:5:7.93:0,8,144	0/0:46,1:5:11:0,11,96	0/0:24,1:24:22.97:0,23,273	0/1:13,0:11:12.81:13,0,65	0/1:34,1:31:63.08:81,0,63	0/0:46,0:25:2.72:0,3,538	0/1:28,0:25:64.11:64,0,110	0/1:73,7:63:99:174,0,1464	0/0:15,1:14:5.73:0,6,83	0/0:64,0:62:28.88:0,29,754	0/1:30,0:22:37.23:65,0,37	0/1:29,0:22:13.52:14,0,57	0/0:54,0:50:9.44:0,9,252	0/0:52,0:50:48.53:0,49,718	0/1:26,2:25:39.38:39,0,324	0/0:22,0:22:9.27:0,9,332	0/1:43,0:16:99:131,0,132	0/1:20,0:16:4.72:17,0,5	0/1:98,0:76:39.61:200,0,40	0/1:31,0:24:17.19:66,0,17	1/1:16,1:14:3.19:25,3,0	1/1:34,0:24:6.11:38,6,0	0/0:33,0:29:21.72:0,22,215	0/1:57,5:54:40.99:41,0,1303	0/1:17,2:18:15.67:16,0,179	0/0:3,0:3:6.02:0,6,82
chr10	16098710	.	G	GCC	272.58	PASS	AB=0.984;AC=12;AF=0.214;AN=56;BaseQRankSum=6.288;DP=1036;FS=0.000;HRun=0;HaplotypeScore=327.6901;InbreedingCoeff=-0.1422;MQ=36.35;MQ0=87;MQRankSum=-3.629;QD=0.83;ReadPosRankSum=-1.016;VQSLOD=1.1839;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:45,0:43:3.93:4,0,210	1/1:4,0:4:1.98:6,2,0	0/0:49,0:5:5.80:0,6,118	0/1:41,0:7:21.47:21,0,103	0/1:24,1:24:33.24:33,0,263	0/0:15,0:13:4.39:0,4,49	0/1:34,1:32:67.46:226,0,67	0/1:49,0:27:1.96:2,0,320	0/1:29,1:26:49.15:49,0,77	0/0:76,0:60:66.01:0,66,1109	0/1:17,0:15:3.09:3,0,73	0/0:65,0:62:27.90:0,28,562	0/0:30,1:22:22.45:0,22,221	0/0:30,2:25:10.99:0,11,116	0/0:54,0:49:11.87:0,12,236	0/0:51,0:49:8.83:0,9,456	0/1:30,0:29:16.57:17,0,268	0/0:21,0:21:15.67:0,16,314	0/0:40,0:19:28.72:0,29,372	0/1:19,0:17:11.68:12,0,35	0/0:100,3:81:10.51:0,11,441	0/0:32,0:27:28.33:0,28,329	0/0:18,2:17:8.71:0,9,137	0/0:34,1:26:20.32:0,20,278	0/1:32,0:29:32.31:32,0,89	0/0:61,0:54:86.11:0,86,1011	0/0:19,0:18:17.77:0,18,342	0/0:3,0:3:6.02:0,6,83
chr10	16098850	.	CTG	C	1908.79	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=6.342;DP=973;FS=0.987;HRun=0;HaplotypeScore=355.3946;InbreedingCoeff=0.8466;MQ=40.52;MQ0=16;MQRankSum=-4.501;QD=8.56;ReadPosRankSum=0.252;VQSLOD=2.3211;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:18,10:27:14.38:122,14,0	0/0:12,0:12:18.06:0,18,299	0/0:29,0:6:12.04:0,12,201	0/0:26,0:7:17.96:0,18,236	0/0:30,0:30:21.89:0,22,342	0/0:33,0:32:42.47:0,42,687	0/0:38,0:36:64.45:0,64,1034	0/0:64,0:56:84.89:0,85,1374	0/0:36,0:36:63.15:0,63,1015	0/0:49,0:45:72.24:0,72,1195	0/0:23,0:22:27.09:0,27,450	1/1:20,16:36:19.03:419,19,0	0/0:38,0:38:50.80:0,51,749	0/0:45,0:45:52.46:0,52,845	1/1:12,25:37:39.82:533,40,0	1/1:14,16:30:37.17:421,37,0	0/1:29,0:29:18.20:18,0,402	1/1:18,11:29:15.53:357,16,0	0/0:28,0:24:57.18:0,57,873	0/0:18,0:18:11.94:0,12,197	0/0:118,0:116:99:0,108,1582	0/0:32,0:31:28.59:0,29,499	0/0:20,0:20:8.43:0,8,150	0/0:54,1:55:43.48:0,43,722	1/1:19,15:34:25.05:227,25,0	0/0:37,1:35:45.92:0,46,1183	0/0:15,0:15:17.97:0,18,245	0/0:2,0:2:6.02:0,6,99
chr10	16098882	.	ATG	A	2412.39	PASS	AB=0.786;AC=15;AF=0.268;AN=56;BaseQRankSum=-1.023;DP=819;FS=0.000;HRun=0;HaplotypeScore=340.9703;InbreedingCoeff=0.7015;MQ=40.29;MQ0=16;MQRankSum=-4.934;QD=13.40;ReadPosRankSum=-0.034;VQSLOD=2.0149;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:25:2.73:3,0,129	1/1:5,4:9:8.47:152,8,0	0/0:37,0:16:40.90:0,41,577	0/0:27,0:9:24.08:0,24,377	1/1:8,11:19:10.07:121,10,0	0/0:29,0:28:37.63:0,38,658	0/0:34,0:32:42.14:0,42,709	0/0:49,0:46:85.53:0,86,1417	0/0:35,0:35:62.84:0,63,1028	1/1:20,14:32:63.04:776,63,0	1/1:8,5:13:14.94:197,15,0	0/0:27,1:28:27.73:0,28,588	0/0:31,0:31:61.51:0,62,836	0/0:30,0:30:51.15:0,51,817	0/0:35,0:35:40.64:0,41,702	0/0:31,0:31:28.90:0,29,514	0/1:14,9:23:66.26:201,0,66	0/0:23,0:22:44.27:0,44,439	0/0:29,0:23:69.23:0,69,1137	0/0:14,0:13:12.04:0,12,206	0/0:97,0:97:89.81:0,90,1498	0/0:29,0:27:25.59:0,26,460	0/0:12,0:12:9.01:0,9,154	0/0:52,0:51:35.81:0,36,607	0/0:17,0:17:20.93:0,21,356	0/1:16,21:35:54.77:774,0,55	1/1:9,8:17:23.92:279,24,0	1/1:1,2:3:8.89:94,9,0
chr10	16098892	.	GCCTC	G	1492.79	PASS	AB=0.913;AC=14;AF=0.250;AN=56;BaseQRankSum=8.731;DP=754;FS=15.177;HRun=0;HaplotypeScore=336.7844;InbreedingCoeff=-0.0101;MQ=40.21;MQ0=20;MQRankSum=-9.456;QD=5.55;ReadPosRankSum=2.831;VQSLOD=0.9238;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:18,0:21:47.10:47,0,89	0/1:7,0:7:6.72:7,0,93	0/0:43,0:16:0.77:0,1,588	0/0:23,1:10:9.37:0,9,475	0/1:17,0:19:15.49:15,0,61	0/0:24,0:23:37.79:0,38,464	0/0:25,2:27:35.87:0,36,413	0/0:42,1:36:28.56:0,29,1539	0/0:31,1:32:39.84:0,40,460	0/1:23,1:26:99:351,0,103	0/0:8,0:9:14.70:0,15,150	0/1:27,1:30:81.64:82,0,691	0/1:24,6:30:99:111,0,401	0/0:22,2:25:22.94:0,23,369	0/0:29,1:31:39.84:0,40,645	0/1:28,2:32:51.19:51,0,490	0/1:24,0:25:19.81:20,0,157	0/1:21,0:22:99:191,0,352	0/0:28,0:24:13.24:0,13,962	0/0:15,2:16:12.15:0,12,118	0/0:86,2:86:78.30:0,78,1039	0/0:22,1:22:24.87:0,25,195	0/0:10,1:11:9.45:0,9,110	0/0:34,8:42:9.96:0,10,396	0/0:15,1:16:20.85:0,21,403	0/1:34,1:32:99:430,0,238	1/1:10,1:15:26.51:280,27,0	1/1:3,0:4:6.91:68,7,0
chr10	16098893	.	CCT	C	589.50	PASS	AB=0.995;AC=11;AF=0.196;AN=56;BaseQRankSum=6.808;DP=750;FS=2.333;HRun=0;HaplotypeScore=325.4359;InbreedingCoeff=0.1390;MQ=40.20;MQ0=20;MQRankSum=-7.464;QD=3.19;ReadPosRankSum=2.990;VQSLOD=1.7786;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:21,0:21:6.04:6,0,29	0/1:7,0:7:4.09:4,0,65	0/0:42,0:15:28.92:0,29,378	0/0:24,0:9:17.18:0,17,254	0/1:19,0:19:12.94:13,0,39	0/0:24,0:23:30.18:0,30,156	0/0:27,0:27:27.42:0,27,145	0/0:42,1:36:61.16:0,61,543	0/0:31,0:32:42.69:0,43,190	0/1:27,0:26:68.17:206,0,68	0/0:9,0:9:12.45:0,12,99	0/1:29,1:30:9.22:9,0,220	0/0:29,0:29:27.90:0,28,195	0/0:25,0:25:36.25:0,36,169	0/0:31,0:31:24.27:0,24,173	0/0:32,0:32:3.59:0,4,142	0/1:25,0:25:38.17:38,0,114	0/0:22,0:21:14.98:0,15,173	0/0:27,1:24:56.85:0,57,361	0/0:14,3:16:10.63:0,11,55	0/0:87,1:86:72.37:0,72,369	0/0:23,0:22:21.46:0,21,88	0/0:11,0:11:6.69:0,7,32	0/0:43,0:42:30.91:0,31,179	0/0:15,0:15:17.62:0,18,122	0/1:37,0:32:99:261,0,107	1/1:15,0:15:26.38:164,26,0	1/1:4,0:4:2.14:33,2,0
chr10	16098896	.	CTGTG	C	7207.60	PASS	AB=0.714;AC=38;AF=0.679;AN=56;BaseQRankSum=-4.789;DP=736;FS=9.843;HRun=0;HaplotypeScore=312.2190;InbreedingCoeff=0.0968;MQ=39.84;MQ0=20;MQRankSum=4.234;QD=10.57;ReadPosRankSum=3.801;VQSLOD=2.7651;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:10,0:20:11.91:100,0,12	0/0:4,0:8:3.33:0,3,27	0/1:41,0:14:30.41:30,0,281	0/0:22,0:9:15:0,15,313	1/1:4,0:19:2.54:7,3,0	1/1:12,12:23:24.73:384,25,0	1/1:14,10:27:18.98:442,19,0	1/1:24,18:34:31.18:561,31,0	1/1:11,20:31:45.07:851,45,0	0/1:9,1:26:16.46:144,0,16	0/0:7,0:9:3:0,3,26	0/1:16,0:28:41.17:71,0,41	0/1:19,10:29:81.33:475,0,81	1/1:10,16:26:39:642,39,0	0/1:17,0:28:4.48:44,0,4	1/1:17,0:32:22.89:167,23,0	0/1:14,1:24:24.99:25,0,82	0/1:14,0:21:52.68:235,0,53	1/1:15,12:22:33.11:569,33,0	1/1:11,6:16:12.63:181,13,0	1/1:32,42:81:47.23:984,47,0	1/1:9,15:23:30.88:503,31,0	1/1:4,6:10:9.19:124,9,0	1/1:24,16:42:29.94:407,30,0	0/0:6,0:14:11.40:0,11,65	0/1:17,0:33:65.34:114,0,65	1/1:4,0:15:15.87:123,16,0	0/1:2,0:5:21.52:22,0,26
chr10	16098902	.	G	GTGTGCCTC	3887.84	PASS	AB=0.937;AC=18;AF=0.321;AN=56;BaseQRankSum=6.049;DP=727;FS=22.691;HRun=0;HaplotypeScore=359.9156;InbreedingCoeff=0.3715;MQ=38.59;MQ0=23;MQRankSum=-5.835;QD=10.51;ReadPosRankSum=-4.505;VQSLOD=0.7595;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:21,3:23:10.69:513,11,0	0/0:7,0:7:8.96:0,9,156	0/0:43,0:13:16.03:0,16,378	0/0:30,0:9:24.04:0,24,519	0/0:18,0:18:2.21:0,2,56	0/0:24,0:23:28.74:0,29,323	0/1:26,0:26:86.96:87,0,177	0/0:43,0:33:34.05:0,34,286	0/0:31,0:31:14.14:0,14,564	0/0:26,0:25:8.12:0,8,812	0/0:5,0:5:3.01:0,3,53	1/1:29,0:29:22.91:312,23,0	0/0:23,0:22:30.70:0,31,275	0/0:21,0:21:29.15:0,29,389	1/1:28,0:28:32.72:292,33,0	1/1:30,0:30:30.96:430,31,0	0/1:21,4:25:99:512,0,128	1/1:19,2:20:44.46:1075,44,0	0/0:26,0:21:30:0,30,485	0/0:19,0:18:2.79:0,3,105	0/1:67,9:75:99:167,0,542	0/0:25,0:24:14.55:0,15,282	0/0:8,0:9:0.35:0,0,6	0/1:32,4:35:69.49:69,0,346	1/1:15,0:15:17.53:110,18,0	0/1:37,1:33:99:287,0,844	0/1:21,0:21:33.90:34,0,373	0/0:5,0:5:6.55:0,7,113
chr10	16098906	.	G	GCTTC	1253.62	PASS	AB=0.976;AC=10;AF=0.179;AN=56;BaseQRankSum=7.899;DP=710;FS=7.672;HRun=0;HaplotypeScore=326.4867;InbreedingCoeff=-0.0470;MQ=38.99;MQ0=26;MQRankSum=-4.309;QD=5.94;ReadPosRankSum=-2.372;VQSLOD=0.8602;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:22,2:23:69.80:139,0,70	0/0:6,0:6:7.53:0,8,128	0/0:42,0:10:4.06:0,4,306	0/0:35,0:10:24.05:0,24,446	0/1:19,0:19:3.29:3,0,29	0/0:19,0:18:25.10:0,25,318	0/0:25,1:26:3.37:0,3,294	0/0:46,0:33:78.45:0,78,866	0/1:30,1:31:11.61:12,0,542	0/0:24,0:23:57.12:0,57,666	0/0:6,0:5:3.01:0,3,52	0/1:27,0:27:80.58:254,0,81	0/0:22,0:21:38.51:0,39,348	0/0:20,0:20:36.12:0,36,406	0/1:23,0:23:61.36:284,0,61	0/1:27,0:27:95.48:95,0,130	0/1:25,0:26:66.48:66,0,278	0/1:19,2:20:81.11:377,0,81	0/0:24,0:19:46.43:0,46,562	0/0:17,2:18:4.97:0,5,145	0/0:74,0:72:63.35:0,63,640	0/0:24,1:24:2.84:0,3,274	0/0:8,0:8:5.48:0,5,49	0/0:35,0:34:22.92:0,23,294	1/1:12,0:13:14.88:164,15,0	0/0:39,0:34:27.75:0,28,972	0/0:22,0:22:27.58:0,28,420	0/0:6,0:6:14.97:0,15,153
chr10	16098908	.	GTGTGCC	G	1513.49	PASS	AB=0.992;AC=25;AF=0.446;AN=56;BaseQRankSum=6.383;DP=691;FS=32.603;HRun=0;HaplotypeScore=318.9537;InbreedingCoeff=-0.5317;MQ=37.23;MQ0=29;MQRankSum=-3.941;QD=2.42;ReadPosRankSum=0.077;VQSLOD=1.2447;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:24,1:24:96.84:97,0,116	0/0:6,0:6:14:0,14,119	0/1:40,0:8:3.16:3,0,240	0/0:34,0:8:21.03:0,21,456	0/0:19,0:19:5.77:0,6,75	0/1:18,0:17:11.40:11,0,93	0/1:25,0:25:50.86:96,0,51	0/1:41,0:28:3.50:3,0,592	0/1:30,0:30:53.23:53,0,106	0/1:23,0:22:3.18:3,0,522	0/0:6,0:5:2.90:0,3,22	0/1:26,0:26:10.34:202,0,10	0/1:21,0:19:1.34:1,0,101	0/1:20,0:20:7.78:8,0,101	0/1:23,0:23:35.47:70,0,35	1/1:27,0:27:9.67:254,10,0	0/1:24,1:25:37.39:37,0,182	0/1:22,1:22:99:327,0,121	0/1:21,0:15:21.09:21,0,133	0/1:19,0:17:31.33:55,0,31	0/1:74,0:72:40.77:41,0,237	0/1:24,0:24:56.95:84,0,57	0/1:8,0:8:13.36:46,0,13	0/1:34,0:33:21.47:21,0,81	0/1:13,0:13:0:0,0,0	0/1:37,1:33:99:165,0,878	0/1:21,1:22:54.93:55,0,414	0/1:6,0:6:2.56:3,0,83
chr10	16098911	.	TGC	T	840.86	PASS	AB=0.995;AC=18;AF=0.321;AN=56;BaseQRankSum=3.212;DP=686;FS=0.988;HRun=0;HaplotypeScore=297.8353;InbreedingCoeff=0.0233;MQ=36.58;MQ0=26;MQRankSum=-6.354;QD=2.78;ReadPosRankSum=4.020;VQSLOD=2.1033;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:23:17.44:0,17,93	0/1:6,0:6:23.73:24,0,24	0/0:40,0:7:14.91:0,15,170	0/0:34,0:10:14.20:0,14,213	0/1:18,1:19:3.97:16,0,4	0/1:17,0:16:1.11:1,0,48	0/1:22,0:22:7.11:7,0,77	0/0:44,0:31:70.22:0,70,438	0/1:30,0:30:14.85:15,0,97	1/1:21,2:22:28.52:272,29,0	0/1:5,0:4:0.11:0,0,0	0/1:27,0:27:25.85:26,0,63	0/0:21,0:19:10.32:0,10,85	0/0:20,0:20:15.09:0,15,106	0/0:23,0:23:5.96:0,6,30	0/0:26,0:27:7.86:0,8,78	0/1:25,0:25:8.89:9,0,164	0/0:23,0:22:17.18:0,17,215	0/0:22,0:15:12.35:0,12,106	0/1:17,0:15:8.86:25,0,9	0/0:73,0:71:56.76:0,57,254	0/1:24,0:24:31.76:32,0,50	0/1:8,0:8:1.76:14,0,2	0/0:32,0:31:3.69:0,4,51	0/1:15,0:15:0:0,0,0	0/1:36,1:32:61.14:360,0,61	0/1:22,0:22:34.40:151,0,34	1/1:6,0:6:6.75:42,7,0
chr10	16098924	.	GTGCTTC	G	3807.27	PASS	AB=0.961;AC=24;AF=0.429;AN=56;BaseQRankSum=-0.339;DP=763;FS=18.080;HRun=0;HaplotypeScore=331.9202;InbreedingCoeff=-0.5005;MQ=36.69;MQ0=19;MQRankSum=-1.708;QD=6.51;ReadPosRankSum=-0.053;VQSLOD=0.8729;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,1:31:9.92:0,10,395	0/1:5,0:5:91.73:92,0,92	0/1:40,0:7:21.52:22,0,189	0/0:37,0:11:28.62:0,29,568	0/0:19,1:19:6.01:0,6,66	0/1:16,0:16:25.32:25,0,482	0/1:25,0:25:74.70:75,0,422	0/0:50,0:37:10.78:0,11,1978	0/1:29,0:29:99:112,0,839	0/1:17,14:29:99:436,0,856	0/0:4,1:4:0:0,0,0	0/1:36,1:37:33.82:503,0,34	0/1:20,0:18:44.04:44,0,491	0/1:24,0:24:32.50:33,0,659	0/1:33,2:35:37.13:199,0,37	1/1:31,1:31:55.15:618,55,0	0/1:24,3:27:99:141,0,407	0/1:27,0:26:99:381,0,475	0/1:23,0:17:20.08:20,0,726	0/1:15,0:14:92.98:93,0,164	0/1:76,0:73:36:36,0,1045	0/1:25,0:25:99:129,0,482	0/1:8,0:8:28.55:46,0,29	0/0:34,0:34:27.63:0,28,568	1/1:17,0:17:9:89,9,0	0/1:37,4:37:99:428,0,1315	0/1:25,1:26:99:177,0,437	0/1:4,1:5:99:109,0,156
chr10	16098926	.	GCTTC	G	5165.12	PASS	AB=0.872;AC=27;AF=0.482;AN=56;BaseQRankSum=-2.091;DP=752;FS=17.252;HRun=0;HaplotypeScore=308.0256;InbreedingCoeff=-0.6185;MQ=36.58;MQ0=17;MQRankSum=-3.620;QD=7.81;ReadPosRankSum=0.975;VQSLOD=1.8656;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:21,10:31:27.59:28,0,360	0/1:5,0:5:81.10:81,0,90	0/1:36,1:6:19.66:20,0,198	0/0:35,2:11:28.62:0,29,558	0/0:20,0:19:6:0,6,60	0/1:16,0:16:23.10:23,0,463	0/1:21,3:25:99:103,0,421	0/1:44,5:39:99:191,0,1839	0/1:24,1:26:99:111,0,791	0/1:31,0:29:99:321,0,725	0/1:5,1:5:0:0,0,0	0/1:19,17:37:31.69:800,0,32	0/1:15,5:18:36.82:37,0,484	0/1:19,3:22:72.97:73,0,604	0/1:5,28:33:39.71:454,0,40	1/1:7,22:30:56.11:1113,56,0	0/1:26,1:27:80.21:80,0,423	0/1:17,10:27:99:650,0,450	0/1:21,1:18:32.12:32,0,765	0/1:11,3:13:90.80:91,0,162	0/1:72,1:70:57.53:58,0,1017	0/1:22,2:25:99:128,0,474	0/1:7,1:8:29.10:44,0,29	0/0:31,3:34:27.81:0,28,543	1/1:5,11:17:9.03:187,9,0	0/1:38,0:35:99:292,0,1285	0/1:25,1:26:99:153,0,483	0/1:4,1:5:97.03:97,0,150
chr10	16098930	.	C	CTGTGTGTG	7386.45	PASS	AB=0.986;AC=48;AF=0.857;AN=56;BaseQRankSum=-0.490;DP=777;FS=7.626;HRun=0;HaplotypeScore=343.2836;InbreedingCoeff=0.2128;MQ=36.51;MQ0=18;MQRankSum=-0.589;QD=9.98;ReadPosRankSum=2.209;VQSLOD=2.2451;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:34,0:33:2.75:17,3,0	1/1:4,2:6:6.02:142,6,0	0/1:36,0:8:22.28:22,0,159	0/0:37,0:14:5.60:0,6,255	0/1:20,2:21:0.44:0,0,0	1/1:19,0:18:2.88:70,3,0	1/1:28,0:27:9:120,9,0	0/1:52,0:40:24.34:391,0,24	1/1:24,0:24:11.52:216,12,0	1/1:30,1:29:29.67:635,30,0	0/1:8,0:7:0:0,0,0	1/1:37,0:38:13.16:635,13,0	0/1:20,0:18:21.54:22,0,23	1/1:20,0:20:11.55:117,12,0	1/1:33,0:33:22.71:289,23,0	1/1:32,0:31:59.24:890,59,0	1/1:20,5:25:14.92:479,15,0	1/1:30,0:29:32.19:431,32,0	1/1:30,0:22:26.28:383,26,0	1/1:16,0:14:6.02:139,6,0	1/1:74,0:71:5.06:102,5,0	1/1:26,0:26:9:196,9,0	1/1:10,0:10:9.02:140,9,0	0/1:32,0:31:0.11:1,0,0	1/1:18,0:18:8.86:73,9,0	1/1:38,2:36:42.12:1107,42,0	1/1:16,10:29:21.46:689,21,0	1/1:5,0:5:5.75:81,6,0
chr10	16101715	.	TTGTGTGAACA	T	12658.24	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=16.457;DP=719;FS=4.417;HRun=0;HaplotypeScore=225.6296;InbreedingCoeff=0.9979;MQ=79.78;MQ0=0;MQRankSum=-16.127;QD=76.72;ReadPosRankSum=5.183;VQSLOD=4.6695;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,151,7353	1/1:0,8:8:18.06:600,18,0	0/0:29,0:29:87.27:0,87,4264	0/0:16,0:16:45.15:0,45,2040	1/1:3,27:30:63.17:1957,63,0	0/0:20,0:20:60.21:0,60,3065	0/0:29,0:29:84.25:0,84,3912	0/0:36,0:36:99:0,99,5133	0/0:28,0:28:84.29:0,84,4399	1/1:5,18:23:54.18:1739,54,0	1/1:0,14:14:32.81:959,33,0	0/0:17,0:17:51.18:0,51,2554	0/0:29,0:29:87.30:0,87,4448	0/0:18,0:18:54.17:0,54,2371	0/0:43,0:43:99:0,126,6666	0/0:36,0:36:99:0,105,5604	1/1:4,18:22:45.11:1420,45,0	0/0:25,0:25:75.21:0,75,3671	0/0:13,0:13:33.11:0,33,1702	0/0:30,0:30:87.30:0,87,4400	0/0:36,0:36:99:0,102,5000	0/0:24,0:24:72.25:0,72,3669	0/0:27,0:27:81.28:0,81,4072	0/0:32,0:32:96.33:0,96,4938	0/0:16,0:16:45.15:0,45,2332	1/1:1,29:30:84.29:2710,84,0	1/1:1,29:30:78.27:2573,78,0	1/1:0,8:8:21.07:700,21,0
chr10	16102962	.	AC	A	2905.80	PASS	AB=0.978;AC=45;AF=0.804;AN=56;BaseQRankSum=5.937;DP=480;FS=1.203;HRun=13;HaplotypeScore=94.1782;InbreedingCoeff=0.3929;MQ=72.63;MQ0=1;MQRankSum=-0.758;QD=6.76;ReadPosRankSum=0.889;VQSLOD=2.8162;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:31.92:0,32,195	1/1:5,5:10:14.81:109,15,0	0/1:24,0:18:18.37:18,0,65	0/1:18,0:16:10.12:10,0,47	1/1:7,22:30:67.30:483,67,0	1/1:12,0:17:16.58:50,17,0	1/1:11,0:16:22.39:66,22,0	1/1:12,0:14:6.07:18,6,0	1/1:19,0:24:18.65:54,19,0	1/1:3,24:27:68:499,68,0	1/1:2,8:10:20.88:153,21,0	0/0:10,0:10:5.77:0,6,32	1/1:9,0:12:4.02:12,4,0	1/1:13,0:16:12.74:39,13,0	0/1:16,0:16:1.52:2,0,79	0/1:14,1:15:22.91:23,0,74	1/1:7,27:33:77.36:568,77,0	0/1:19,1:20:10.48:10,0,158	1/1:11,0:15:12.75:40,13,0	1/1:6,0:13:7.90:23,8,0	1/1:8,0:12:7.64:22,8,0	1/1:9,0:13:11.04:41,11,0	1/1:10,0:10:8.59:27,9,0	1/1:8,0:19:23.01:71,23,0	0/0:15,0:15:7.97:0,8,171	1/1:6,12:18:34.66:246,35,0	1/1:4,17:20:50.54:371,51,0	1/1:1,5:6:14.89:109,15,0
chr10	16104047	.	TA	T	3169.64	PASS	AB=0.796;AC=29;AF=0.518;AN=56;BaseQRankSum=9.410;DP=597;FS=0.375;HRun=14;HaplotypeScore=82.5179;InbreedingCoeff=0.5766;MQ=71.73;MQ0=1;MQRankSum=-0.834;QD=8.68;ReadPosRankSum=5.518;VQSLOD=3.0080;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:11,16:27:9.69:315,0,10	1/1:1,10:11:17.81:123,18,0	0/0:19,0:17:2.83:0,3,109	0/0:8,0:6:3.41:0,3,22	1/1:6,20:27:52.47:355,52,0	0/0:22,1:23:32.05:0,32,438	0/0:16,0:19:41.71:0,42,358	0/0:31,3:35:24.37:0,24,472	0/1:12,0:14:2.70:3,0,102	1/1:9,11:20:29.59:202,30,0	1/1:8,14:21:40.84:286,41,0	1/1:14,10:25:43.52:290,44,0	0/0:20,3:23:24.36:0,24,341	0/1:17,3:22:14.08:14,0,272	1/1:7,14:22:37.32:252,37,0	1/1:3,22:28:47.72:305,48,0	1/1:7,10:18:7.03:183,7,0	1/1:4,13:17:10.80:219,11,0	0/1:24,6:31:33.66:34,0,387	0/0:28,0:35:54.42:0,54,578	0/0:18,0:19:39.34:0,39,346	0/0:13,0:13:11.99:0,12,103	0/0:22,0:22:41.92:0,42,370	0/0:15,0:16:41.85:0,42,367	1/1:8,17:26:2.48:225,2,0	1/1:6,15:23:48.66:319,49,0	1/1:5,14:19:8.98:182,9,0	0/1:5,7:12:13:67,0,13
chr10	16104785	.	T	TTAGC	21626.72	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-13.788;DP=731;FS=6.266;HRun=0;HaplotypeScore=111.0515;InbreedingCoeff=0.9994;MQ=79.53;MQ0=0;MQRankSum=-4.597;QD=69.99;ReadPosRankSum=0.180;VQSLOD=7.0571;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,114,2378	0/0:9,0:9:24.08:0,24,503	0/0:20,0:20:60.19:0,60,1181	0/0:18,0:18:48.16:0,48,963	0/0:26,0:26:72.23:0,72,1470	1/1:4,16:21:54.19:1510,54,0	1/1:1,17:22:48.16:1355,48,0	1/1:5,19:30:87.22:2062,87,0	1/1:1,22:23:69.24:1997,69,0	0/0:19,0:19:57.20:0,57,1187	0/0:16,0:16:48.04:0,48,922	0/0:35,0:35:99:0,102,2123	1/1:1,29:31:84.29:2406,84,0	1/1:2,22:25:69.24:1963,69,0	0/0:33,0:33:99:0,99,2014	0/0:37,0:37:24.41:0,24,2140	0/0:39,0:39:99:0,117,2454	0/0:20,0:20:57.20:0,57,1195	1/1:3,16:19:57.20:1601,57,0	1/1:4,30:36:93.20:2471,93,0	1/1:0,25:29:60.21:1663,60,0	1/1:3,19:25:63.21:1749,63,0	1/1:3,11:15:29.84:851,30,0	1/1:4,27:33:72.36:1999,72,0	0/0:29,0:29:84.29:0,84,1762	0/0:36,0:36:99:0,108,2255	0/0:20,0:20:60.21:0,60,1246	0/0:26,0:26:69.24:0,69,1424
chr10	16105410	.	TATAA	T	3519.89	PASS	AB=0.515;AC=27;AF=0.482;AN=56;BaseQRankSum=11.493;DP=551;FS=6.984;HRun=0;HaplotypeScore=99.9757;InbreedingCoeff=0.9085;MQ=72.87;MQ0=2;MQRankSum=-1.410;QD=11.85;ReadPosRankSum=-2.043;VQSLOD=2.1237;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,0:25:10.64:59,11,0	1/1:0,0:7:14.47:128,14,0	0/0:16,0:13:29.10:0,29,285	0/0:12,0:11:13.94:0,14,160	1/1:0,0:14:34.83:213,35,0	0/0:24,0:24:39.40:0,39,344	0/0:16,0:16:43.01:0,43,329	0/0:19,0:17:48.01:0,48,424	0/0:17,0:17:27.41:0,27,222	1/1:1,0:27:68.91:618,69,0	1/1:13,0:13:35.90:316,36,0	1/1:0,0:21:14.97:161,15,0	0/0:13,0:13:28.46:0,28,218	0/0:21,0:21:60.33:0,60,492	1/1:1,31:32:20.82:354,21,0	0/1:2,32:34:6.94:279,0,7	1/1:0,0:24:12.04:149,12,0	1/1:0,25:25:15.01:254,15,0	0/0:20,0:19:38.91:0,39,403	0/0:14,0:14:27.14:0,27,228	0/0:24,0:24:28.84:0,29,389	0/0:15,0:15:38.68:0,39,294	0/0:23,0:23:54.35:0,54,440	0/0:20,0:20:41.63:0,42,309	1/1:0,26:26:21.07:396,21,0	1/1:0,0:15:41.86:407,42,0	1/1:4,0:26:14.59:130,15,0	1/1:0,0:8:8.85:56,9,0
chr10	16105466	.	AAGAAAGAAAGAAAGAT	A	1989.09	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=0.557;DP=632;FS=1.846;HRun=0;HaplotypeScore=224.0954;InbreedingCoeff=-0.0733;MQ=57.77;MQ0=19;MQRankSum=0.781;QD=5.49;ReadPosRankSum=-2.125;VQSLOD=2.6216;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:50.53:0,51,632	0/0:11,0:11:31.05:0,31,325	0/0:14,0:7:14.19:0,14,171	0/0:2,0:1:2.97:0,3,20	0/0:21,0:21:40.42:0,40,556	0/0:25,0:25:9.50:0,10,180	0/1:19,0:19:28.16:281,0,28	1/1:30,0:19:44.53:406,45,0	1/1:1,27:28:6.02:179,6,0	0/1:26,0:25:99:101,0,669	0/1:16,0:16:20.65:21,0,335	0/1:23,0:23:2.96:3,0,507	1/1:23,0:22:5.99:54,6,0	0/1:22,0:21:99:148,0,400	0/0:30,0:29:60.08:0,60,1515	0/0:29,0:28:44.98:0,45,1102	0/1:27,0:27:38.37:38,0,293	0/0:25,0:25:59.76:0,60,898	0/1:26,0:20:99:324,0,172	0/1:18,0:18:99:159,0,692	0/1:20,0:20:99:208,0,279	0/1:20,0:17:73.16:125,0,73	0/1:14,0:14:10.69:11,0,22	0/0:28,0:27:3.48:0,3,76	0/0:28,0:27:56.05:0,56,1582	0/1:35,0:34:95.41:95,0,899	0/0:21,0:21:51.41:0,51,838	0/1:15,0:15:0.98:1,0,475
chr10	16105470	.	AAGAAAGAAAGAT	A	3544.76	PASS	AB=0.940;AC=23;AF=0.411;AN=56;BaseQRankSum=1.457;DP=637;FS=0.784;HRun=0;HaplotypeScore=184.4047;InbreedingCoeff=0.2142;MQ=57.78;MQ0=19;MQRankSum=1.025;QD=9.26;ReadPosRankSum=-2.123;VQSLOD=2.2448;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:8.72:0,9,419	0/0:11,0:11:11.34:0,11,177	0/0:14,0:7:14.19:0,14,171	0/0:3,0:2:5.98:0,6,54	0/0:18,0:18:36.74:0,37,387	0/1:26,0:26:0.46:0,0,23	1/1:19,0:19:40.40:458,40,0	1/1:31,0:20:47.61:427,48,0	1/1:27,0:27:6.02:89,6,0	0/1:26,0:25:99:237,0,438	0/1:17,0:17:46.03:46,0,247	0/0:23,0:23:12.63:0,13,386	1/1:1,23:23:6.02:192,6,0	0/1:20,1:20:33.86:444,0,34	0/0:31,0:30:62.89:0,63,1094	0/0:28,0:27:21.70:0,22,690	0/1:28,0:28:99:232,0,272	0/0:26,0:26:43.48:0,43,658	1/1:27,0:21:49.77:444,50,0	0/1:19,0:19:99:230,0,344	0/1:22,0:22:18.67:314,0,19	1/1:4,17:18:4.24:164,4,0	1/1:0,13:13:0.83:15,1,0	0/1:1,27:28:19.98:63,0,20	0/0:27,0:26:43.51:0,44,1016	0/1:34,0:33:99:191,0,623	0/0:22,0:22:32.51:0,33,524	0/0:15,0:15:0.93:0,1,234
chr10	16105474	.	AAGAAAGAT	A	3939.39	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=-0.433;DP=651;FS=2.169;HRun=0;HaplotypeScore=152.3770;InbreedingCoeff=0.3732;MQ=58.64;MQ0=17;MQRankSum=0.054;QD=9.10;ReadPosRankSum=-2.011;VQSLOD=2.5836;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:62.57:0,63,473	0/1:12,0:12:35.27:35,0,177	0/0:17,0:10:23.18:0,23,251	0/0:3,0:2:5.98:0,6,54	0/0:17,0:17:36.24:0,36,296	1/1:1,28:29:5.75:144,6,0	1/1:18,0:18:44.19:404,44,0	1/1:35,0:24:59.72:542,60,0	1/1:27,0:27:5.80:33,6,0	0/1:26,0:26:35.57:36,0,395	0/0:17,0:17:2.84:0,3,244	0/1:25,0:25:98.36:98,0,291	1/1:24,0:23:6.02:102,6,0	1/1:21,0:20:53.83:624,54,0	0/0:31,0:30:65.89:0,66,795	0/0:28,0:27:47.70:0,48,553	0/1:30,0:30:63.92:64,0,312	0/0:26,0:26:65.52:0,66,588	1/1:5,21:21:62.94:672,63,0	0/1:20,0:20:37.27:274,0,37	1/1:22,0:22:53.44:653,53,0	1/1:21,0:18:29.53:192,30,0	1/1:13,0:13:1.77:17,2,0	1/1:28,0:27:2.99:24,3,0	0/0:26,0:25:53.74:0,54,744	0/1:34,0:33:9.48:9,0,615	0/1:22,0:22:16.97:17,0,303	0/0:15,0:15:32.78:0,33,253
chr10	16105878	.	TAGGTCTC	T	283.34	PASS	AB=0.916;AC=5;AF=0.093;AN=54;BaseQRankSum=4.986;DP=556;FS=0.000;HRun=0;HaplotypeScore=127.4807;InbreedingCoeff=-0.1185;MQ=73.51;MQ0=0;MQRankSum=-0.713;QD=3.15;ReadPosRankSum=-5.235;VQSLOD=0.5572;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:69.24:0,69,2786	0/0:9,0:9:24.08:0,24,969	0/0:18,0:18:47.33:0,47,1200	0/0:7,0:7:18.06:0,18,501	0/0:22,0:22:63.22:0,63,2535	0/1:20,0:20:20.58:21,0,297	0/0:20,0:20:18.49:0,18,499	0/1:15,2:17:72.32:72,0,1326	0/0:15,0:15:11.91:0,12,101	0/0:23,0:23:66.23:0,66,2645	0/0:8,0:8:21.07:0,21,848	0/0:24,0:24:72.25:0,72,2758	0/1:18,0:18:48.28:48,0,278	0/0:21,0:21:5.98:0,6,115	0/0:35,0:35:96.33:0,96,3828	0/0:49,0:49:99:0,144,5698	0/0:23,0:23:69.24:0,69,2741	0/0:30,0:30:90.31:0,90,3592	0/1:7,6:13:99:217,0,582	0/0:17,0:17:8.35:0,8,199	0/1:22,0:22:40.61:41,0,428	0/0:10,0:10:6.45:0,6,93	./.	0/0:13,0:13:8.94:0,9,113	0/0:17,0:17:51.18:0,51,2060	0/0:29,0:29:84.28:0,84,3244	0/0:28,0:28:84.29:0,84,3347	0/0:14,0:14:42.14:0,42,1661
chr10	16105884	.	T	TA	151.16	PASS	AB=0.954;AC=10;AF=0.200;AN=50;BaseQRankSum=5.769;DP=542;FS=0.000;HRun=0;HaplotypeScore=74.0238;InbreedingCoeff=0.3269;MQ=72.40;MQ0=0;MQRankSum=-0.434;QD=1.34;ReadPosRankSum=-5.456;VQSLOD=-0.5689;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:69.23:0,69,965	0/0:11,0:11:33.10:0,33,444	0/0:16,0:16:42.45:0,42,506	0/0:7,0:7:16.76:0,17,174	0/0:23,0:23:66.14:0,66,906	0/1:17,1:18:27.13:27,0,30	0/0:21,0:21:11.94:0,12,124	0/1:16,0:16:20.38:20,0,494	./.	0/0:22,0:22:66.22:0,66,910	0/0:8,0:8:21.07:0,21,294	0/0:22,0:22:66.22:0,66,923	1/1:15,2:17:2.96:26,3,0	1/1:20,0:20:3:25,3,0	0/0:31,0:31:93.31:0,93,1301	0/0:49,0:49:99:0,147,2056	0/0:24,0:24:69.20:0,69,945	0/0:30,0:30:90.30:0,90,1259	0/1:11,0:11:81.87:82,0,174	0/0:17,0:17:6.28:0,6,60	0/1:17,3:20:25.63:26,0,89	./.	1/1:11,0:11:6.02:82,6,0	./.	0/0:20,0:20:57.19:0,57,797	0/0:28,0:28:84.28:0,84,1175	0/0:28,0:28:84.27:0,84,1158	0/0:14,0:14:42.09:0,42,534
chr10	16106485	.	TGGGGTG	T	2608.72	PASS	AC=24;AF=0.500;AN=48;BaseQRankSum=4.021;DP=217;FS=0.000;HRun=0;HaplotypeScore=52.9865;InbreedingCoeff=0.6138;MQ=72.73;MQ0=0;MQRankSum=-5.666;QD=21.04;ReadPosRankSum=0.843;VQSLOD=2.4882;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:8:3.01:0,3,100	0/0:3,0:3:3.01:0,3,100	./.	0/0:14,0:12:3.01:0,3,97	0/0:4,0:4:3.01:0,3,98	1/1:5,5:10:15.05:291,15,0	1/1:6,5:11:6.02:119,6,0	1/1:11,2:13:6.02:122,6,0	1/1:1,8:9:18.06:380,18,0	./.	./.	0/0:10,0:10:18.05:0,18,477	1/1:4,6:10:21.07:386,21,0	1/1:3,8:11:18.06:380,18,0	0/0:6,0:6:6.02:0,6,151	0/0:6,0:6:6.02:0,6,199	0/0:4,0:4:3.01:0,3,99	0/0:4,0:4:3.01:0,3,44	1/1:7,5:12:15.04:275,15,0	1/1:5,3:8:6.02:101,6,0	1/1:13,6:19:6.02:100,6,0	1/1:1,6:7:15.05:303,15,0	1/1:2,4:6:12.04:254,12,0	1/1:3,5:8:3.01:63,3,0	0/0:2,0:2:3.01:0,3,100	0/0:7,0:7:6.02:0,6,172	0/0:8,0:8:3.01:0,3,87	./.
chr10	16106947	.	T	TG	2365.06	PASS	AC=48;AF=1.000;AN=48;DP=128;FS=0.000;HRun=1;HaplotypeScore=76.6646;InbreedingCoeff=-0.0889;MQ=48.75;MQ0=0;QD=19.07;VQSLOD=3.7544;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,9:10:9.02:97,9,0	./.	1/1:0,1:1:3.01:45,3,0	./.	1/1:2,1:3:3:25,3,0	1/1:1,2:3:5.97:51,6,0	1/1:0,4:4:5.97:51,6,0	1/1:1,4:5:14.98:167,15,0	1/1:1,6:7:9.49:99,9,0	1/1:1,1:2:5.96:46,6,0	1/1:0,2:2:3.01:33,3,0	1/1:1,7:8:24.06:258,24,0	1/1:1,6:7:11.98:115,12,0	1/1:2,9:11:23.75:222,24,0	1/1:0,6:6:9.01:88,9,0	1/1:3,4:7:17.99:179,18,0	1/1:2,5:7:21:208,21,0	1/1:1,1:2:3.01:37,3,0	1/1:3,3:6:18.05:214,18,0	./.	1/1:3,8:11:2.98:21,3,0	1/1:1,0:1:2.99:24,3,0	./.	1/1:0,3:3:3.01:30,3,0	1/1:0,2:2:3.01:31,3,0	1/1:1,7:8:23.97:259,24,0	1/1:2,4:6:6.02:70,6,0	1/1:0,2:2:6.02:71,6,0
chr10	16106950	.	G	GC	2046.70	PASS	AB=0.567;AC=42;AF=0.955;AN=44;BaseQRankSum=-0.174;DP=103;FS=8.451;HRun=0;HaplotypeScore=74.8193;InbreedingCoeff=0.0072;MQ=45.52;MQ0=0;MQRankSum=0.830;QD=20.47;ReadPosRankSum=0.637;VQSLOD=5.2819;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,9:10:12.04:141,12,0	./.	1/1:0,1:1:3.01:48,3,0	./.	./.	0/1:1,2:3:5.10:29,0,5	1/1:0,4:4:3.01:34,3,0	1/1:0,4:4:12.04:161,12,0	1/1:1,6:7:7.96:105,8,0	1/1:0,1:1:3.01:31,3,0	1/1:0,2:2:3.01:36,3,0	1/1:0,7:7:21.06:240,21,0	1/1:0,6:6:12.01:127,12,0	1/1:0,9:9:20.73:219,21,0	1/1:0,6:6:9.02:96,9,0	1/1:0,4:4:12.04:141,12,0	1/1:1,4:6:13.85:151,14,0	1/1:0,1:1:3.01:40,3,0	1/1:0,3:3:9.02:109,9,0	./.	0/1:0,7:8:0:0,0,0	./.	./.	1/1:0,3:3:3.01:32,3,0	1/1:0,2:2:3.01:34,3,0	1/1:0,7:7:21.01:238,21,0	1/1:0,4:4:3.01:36,3,0	1/1:0,2:2:6.02:77,6,0
chr10	16106954	.	C	CA	2260.51	PASS	AC=42;AF=0.955;AN=44;BaseQRankSum=2.375;DP=110;FS=0.000;HRun=0;HaplotypeScore=74.9437;InbreedingCoeff=0.0692;MQ=37.59;MQ0=0;MQRankSum=-0.954;QD=23.07;ReadPosRankSum=2.039;VQSLOD=5.1110;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,10:10:9.03:115,9,0	./.	1/1:0,1:1:3.01:48,3,0	./.	./.	1/1:2,3:5:4.26:41,4,0	1/1:0,4:4:3.01:38,3,0	1/1:1,4:5:12.02:169,12,0	1/1:0,7:7:11.83:129,12,0	1/1:1,1:2:3.01:35,3,0	1/1:1,1:2:3.01:32,3,0	1/1:0,7:7:21.07:266,21,0	1/1:0,6:6:12.04:149,12,0	1/1:2,8:10:23.08:258,23,0	1/1:0,6:6:9.02:104,9,0	1/1:0,4:4:12.04:156,12,0	1/1:0,5:5:11.27:156,11,0	1/1:0,1:1:3.01:42,3,0	1/1:2,3:5:11.69:140,12,0	./.	0/0:2,7:9:1.02:0,1,3	./.	./.	1/1:0,3:3:3.01:37,3,0	1/1:0,2:2:3.01:38,3,0	1/1:0,7:7:21.06:264,21,0	1/1:0,4:4:3.01:41,3,0	1/1:0,2:2:6.02:82,6,0
chr10	16106962	.	GA	G	2250.09	PASS	AB=0.538;AC=43;AF=0.977;AN=44;BaseQRankSum=1.489;DP=90;FS=0.000;HRun=1;HaplotypeScore=57.0344;InbreedingCoeff=0.0137;MQ=39.24;MQ0=0;MQRankSum=0.334;QD=25.57;ReadPosRankSum=1.672;VQSLOD=3.4608;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,6:6:9.03:126,9,0	./.	1/1:0,1:1:3.01:40,3,0	./.	./.	1/1:0,4:4:3.48:42,3,0	1/1:0,3:3:3.01:41,3,0	1/1:0,4:4:12.04:168,12,0	1/1:0,5:5:9.03:124,9,0	1/1:0,2:2:3.01:42,3,0	1/1:0,2:2:3.01:42,3,0	1/1:0,7:7:21.07:293,21,0	1/1:0,6:6:12.04:166,12,0	1/1:0,9:10:19.98:290,20,0	1/1:0,4:4:6.02:84,6,0	1/1:0,4:4:12.04:162,12,0	1/1:0,4:4:8.72:125,9,0	1/1:0,1:1:3.01:42,3,0	1/1:0,4:4:12.04:167,12,0	./.	0/1:1,6:7:0:0,0,0	./.	./.	1/1:0,3:3:3.01:42,3,0	1/1:0,1:1:3.01:41,3,0	1/1:0,5:5:15.05:207,15,0	1/1:0,4:4:3.01:42,3,0	1/1:0,1:1:3.01:42,3,0
chr10	16107361	.	G	GT	2400.73	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-7.151;DP=496;FS=9.539;HRun=6;HaplotypeScore=75.2744;InbreedingCoeff=0.9493;MQ=74.30;MQ0=1;MQRankSum=-3.728;QD=24.50;ReadPosRankSum=-2.075;VQSLOD=2.1495;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:63.09:0,63,626	1/1:1,2:3:6.02:75,6,0	0/0:25,0:21:18.43:0,18,344	0/0:17,0:13:16.88:0,17,131	1/1:3,20:21:54.17:679,54,0	0/0:17,0:17:42.09:0,42,428	0/0:26,0:26:60.13:0,60,612	0/0:37,0:37:75.14:0,75,759	0/0:18,0:18:51.09:0,51,511	1/1:5,12:17:36.11:452,36,0	1/1:1,2:3:9.02:101,9,0	0/0:38,0:38:65.88:0,66,662	0/0:16,0:16:48.09:0,48,482	0/0:18,0:18:42.07:0,42,421	0/0:14,0:14:30.05:0,30,306	0/0:14,0:14:26.88:0,27,266	1/1:10,14:23:36.10:440,36,0	0/0:21,0:21:29.98:0,30,289	0/0:30,0:30:69.12:0,69,691	0/0:13,0:13:36.08:0,36,367	0/0:16,0:16:42.09:0,42,428	0/0:11,0:11:24.05:0,24,245	0/0:8,0:8:24.05:0,24,245	0/0:18,0:18:39.06:0,39,390	0/0:9,0:9:21.05:0,21,212	1/1:3,10:13:27.07:324,27,0	1/1:1,12:13:36.12:452,36,0	1/1:0,2:2:6.02:75,6,0
chr10	16107654	.	TC	T	1439.69	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=20.637;DP=710;FS=5.755;HRun=1;HaplotypeScore=190.3637;InbreedingCoeff=0.9951;MQ=82.47;MQ0=0;MQRankSum=-17.602;QD=5.76;ReadPosRankSum=-0.082;VQSLOD=0.3032;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,144,2200	0/0:9,0:9:27:0,27,353	0/0:24,0:24:64.43:0,64,965	0/0:27,0:27:77.78:0,78,1123	0/0:27,0:26:72.69:0,73,1086	1/1:2,20:22:44.20:160,44,0	1/1:0,25:25:45.27:126,45,0	1/1:0,14:16:18.87:132,19,0	1/1:6,21:27:36.90:216,37,0	0/0:33,0:33:90.31:0,90,1438	0/0:19,0:19:54.07:0,54,779	0/0:39,0:39:99:0,117,1844	1/1:6,21:27:38.18:193,38,0	1/1:3,15:18:32.25:124,32,0	0/0:43,0:43:99:0,129,2062	0/0:29,0:29:84.26:0,84,1294	0/0:51,0:51:99:0,153,2415	0/0:23,0:23:66.23:0,66,1055	1/1:2,13:15:38.37:194,38,0	1/1:3,18:21:39.09:143,39,0	1/1:7,18:25:35.32:124,35,0	1/1:5,14:19:20.48:127,20,0	1/1:2,10:12:18.35:73,18,0	1/1:2,21:23:15.43:56,15,0	0/0:25,0:25:75.23:0,75,1160	0/0:23,0:23:69.18:0,69,1043	0/0:23,0:23:69.22:0,69,1079	0/0:15,0:15:45.15:0,45,719
chr10	16107659	.	A	AC	4790.31	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=20.467;DP=745;FS=3.303;HRun=0;HaplotypeScore=190.8255;InbreedingCoeff=0.9998;MQ=81.25;MQ0=0;MQRankSum=-18.475;QD=16.69;ReadPosRankSum=-1.039;VQSLOD=5.2256;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,132,1828	0/0:9,0:9:27.06:0,27,358	0/0:24,0:24:66.10:0,66,838	0/0:28,0:28:71.81:0,72,969	0/0:27,0:26:60.20:0,60,839	1/1:6,20:26:69.95:455,70,0	1/1:3,25:28:74.81:407,75,0	1/1:12,14:26:65.77:612,66,0	1/1:11,21:32:68.06:573,68,0	0/0:32,0:32:93.31:0,93,1300	0/0:16,0:16:42.14:0,42,587	0/0:39,0:39:99:0,114,1593	1/1:4,21:25:71.39:467,71,0	1/1:5,15:20:52.61:380,53,0	0/0:44,0:44:99:0,132,1831	0/0:27,0:27:81.26:0,81,1118	0/0:50,0:50:99:0,150,2077	0/0:26,0:26:72.24:0,72,1006	1/1:1,13:14:41.83:344,42,0	1/1:6,18:24:61.39:393,61,0	1/1:12,18:30:58.40:395,58,0	1/1:7,14:21:40.08:322,40,0	1/1:3,10:13:31.84:176,32,0	1/1:7,21:28:45.40:268,45,0	0/0:24,0:24:69.23:0,69,965	0/0:21,0:21:60.20:0,60,839	0/0:27,0:27:81.22:0,81,1068	0/0:19,0:19:57.19:0,57,794
chr10	16107983	.	TC	T	23177.32	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-5.906;DP=807;FS=8.700;HRun=3;HaplotypeScore=85.5114;InbreedingCoeff=0.9841;MQ=85.53;MQ0=0;MQRankSum=-10.939;QD=30.90;ReadPosRankSum=7.587;VQSLOD=3.7824;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,46:47:99:1395,115,0	1/1:0,11:11:30.04:352,30,0	0/0:29,0:29:72.07:0,72,829	0/0:28,0:25:62.18:0,62,737	1/1:1,17:18:48.05:556,48,0	1/1:0,34:34:84.26:1036,84,0	1/1:1,20:21:57.18:703,57,0	1/1:1,29:30:78.16:891,78,0	1/1:1,21:22:48.15:592,48,0	1/1:2,29:31:83.96:934,84,0	1/1:0,19:19:57.07:667,57,0	1/1:0,49:49:99:1368,111,0	1/1:0,32:32:78.25:962,78,0	1/1:0,34:34:75.24:925,75,0	1/1:0,55:55:99:1777,144,0	1/1:0,37:37:90.28:1110,90,0	1/1:2,36:38:96.30:1181,96,0	1/1:1,30:31:72.23:888,72,0	1/1:6,20:26:64.70:800,65,0	1/1:0,20:20:54.17:664,54,0	1/1:0,43:43:99:1258,102,0	1/1:0,24:24:69.09:814,69,0	1/1:0,14:14:39.12:479,39,0	1/1:5,29:34:94:1164,94,0	1/1:0,27:27:72.23:888,72,0	1/1:1,17:18:51.12:593,51,0	1/1:0,30:30:84.26:1036,84,0	1/1:0,5:5:12.04:148,12,0
chr10	16108621	.	GAAAAAAAA	G	4489.63	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=6.362;DP=626;FS=2.911;HRun=21;HaplotypeScore=161.7267;InbreedingCoeff=0.9686;MQ=64.57;MQ0=8;MQRankSum=-10.017;QD=31.18;ReadPosRankSum=9.831;VQSLOD=-0.6933;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,27:40:37.48:810,37,0	0/0:7,0:11:21.07:0,21,364	0/0:34,0:13:9.03:0,9,200	0/0:22,0:13:9.49:0,9,137	0/0:13,0:21:42.14:0,42,1013	0/0:20,0:20:18.04:0,18,368	0/0:27,0:28:57.19:0,57,1536	0/0:39,0:39:68.22:0,68,1435	0/0:27,0:27:27.09:0,27,629	0/0:15,0:20:48.06:0,48,787	0/0:18,0:20:51.17:0,51,991	1/1:3,19:22:48.01:999,48,0	0/0:23,0:24:60.20:0,60,1258	0/0:25,0:25:60.20:0,60,1449	1/1:7,27:34:47.72:999,48,0	1/1:3,18:21:41.79:875,42,0	0/0:14,0:21:48.15:0,48,1161	1/1:2,9:11:14.12:312,14,0	0/0:23,0:21:39.13:0,39,898	0/0:17,0:17:42.14:0,42,879	0/0:17,0:17:36.12:0,36,713	0/0:14,0:14:30.10:0,30,585	0/0:20,0:21:29.22:0,29,705	0/0:4,0:20:18.06:0,18,510	1/1:4,12:16:23.77:494,24,0	0/0:14,0:16:30.07:0,30,551	0/0:24,0:26:69.20:0,69,1406	0/0:8,0:15:27.04:0,27,560
chr10	16108639	.	A	AAAC	5763.19	PASS	AB=0.892;AC=41;AF=0.732;AN=56;BaseQRankSum=-10.789;DP=619;FS=58.695;HRun=0;HaplotypeScore=119.8212;InbreedingCoeff=-0.0173;MQ=61.16;MQ0=6;MQRankSum=5.962;QD=10.18;ReadPosRankSum=-6.425;VQSLOD=0.0297;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:35,0:35:11.84:76,0,12	0/1:7,0:7:3.51:29,0,4	0/0:26,0:8:23.79:0,24,210	0/0:27,0:17:35.84:0,36,222	0/1:17,0:17:76.84:105,0,77	0/1:7,0:18:15.17:16,0,15	1/1:8,2:31:47.44:431,47,0	0/1:14,13:32:5.61:418,0,6	1/1:7,17:28:2.25:131,2,0	1/1:23,0:23:58.44:449,58,0	1/1:21,0:21:11.26:261,11,0	0/1:21,0:21:11.81:12,0,44	1/1:25,0:25:46.09:475,46,0	1/1:21,0:23:39.51:559,40,0	0/1:29,0:29:11.38:11,0,46	0/1:22,0:22:30.58:31,0,34	0/1:23,0:23:36.33:173,0,36	1/1:13,0:13:1.80:68,2,0	1/1:27,0:24:2.81:423,3,0	1/1:6,11:19:29.38:318,29,0	1/1:14,0:14:18.71:258,19,0	0/1:3,0:14:3.36:169,0,3	1/1:6,12:24:17.11:183,17,0	1/1:21,2:24:31.54:302,32,0	0/1:15,0:15:12.89:35,0,13	1/1:18,0:18:41.17:340,41,0	1/1:29,0:29:33.68:394,34,0	1/1:13,0:13:0.38:93,0,0
chr10	16108865	.	GA	G	5392.75	PASS	AB=0.866;AC=26;AF=0.464;AN=56;BaseQRankSum=-3.780;DP=641;FS=3.303;HRun=10;HaplotypeScore=87.6561;InbreedingCoeff=0.7388;MQ=68.33;MQ0=1;MQRankSum=0.040;QD=17.23;ReadPosRankSum=0.211;VQSLOD=5.2998;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:38:77.20:0,77,440	0/0:14,0:14:36.09:0,36,390	0/1:14,0:9:9.40:9,0,70	0/1:23,0:17:14.69:15,0,217	0/0:22,0:22:51.13:0,51,556	1/1:3,22:27:67.06:559,67,0	1/1:3,35:38:99:911,105,0	1/1:6,23:29:68.98:599,69,0	1/1:2,10:12:29.99:260,30,0	0/0:20,0:20:48.11:0,48,513	0/1:16,2:18:13.02:13,0,311	0/0:3,0:30:62.50:0,62,323	1/1:3,8:11:20.98:182,21,0	1/1:3,18:21:47.99:417,48,0	0/0:10,0:32:86.44:0,86,487	0/0:2,0:19:39.80:0,40,199	0/0:33,0:33:93.21:0,93,997	0/0:4,0:25:42.51:0,43,218	1/1:3,18:19:47.99:417,48,0	1/1:3,20:22:56.98:495,57,0	1/1:3,15:18:41.98:365,42,0	1/1:1,17:18:47.98:417,48,0	0/1:3,10:13:6.19:181,0,6	1/1:3,22:26:65.19:554,65,0	0/0:3,0:24:42.65:0,43,213	0/0:38,0:38:84.22:0,84,921	0/0:17,1:19:22.06:0,22,464	0/0:14,0:14:35.92:0,36,369
chr10	16110227	.	GAAAAAAGA	G	8523.07	PASS	AB=1.000;AC=28;AF=0.500;AN=56;BaseQRankSum=-8.380;DP=585;FS=19.157;HRun=0;HaplotypeScore=158.2537;InbreedingCoeff=0.1220;MQ=56.81;MQ0=5;MQRankSum=3.957;QD=17.91;ReadPosRankSum=-4.776;VQSLOD=1.5278;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:32,0:32:99:151,0,1133	1/1:0,10:10:30.09:566,30,0	0/0:10,0:5:12.04:0,12,173	0/0:12,0:6:14.32:0,14,123	1/1:7,30:37:90.26:1528,90,0	0/0:18,0:18:36.12:0,36,1244	0/0:17,0:17:18.05:0,18,473	0/1:39,0:38:99:477,0,742	0/0:12,0:12:8.90:0,9,150	1/1:2,23:25:59.62:1069,60,0	1/1:2,18:20:51.13:737,51,0	0/1:14,0:14:99:151,0,517	0/0:11,0:11:12.04:0,12,367	0/0:10,0:10:18.06:0,18,631	0/1:15,0:15:99:116,0,714	0/1:27,0:27:99:189,0,810	1/1:3,30:33:12.04:324,12,0	0/1:30,0:30:99:145,0,1377	0/1:25,0:19:59.57:60,0,878	0/1:22,0:22:24.73:25,0,1021	0/1:11,0:11:99:99,0,297	0/1:21,0:21:46.98:47,0,593	0/1:22,0:22:9.02:9,0,616	0/0:19,0:19:13.86:0,14,365	0/1:26,0:26:99:215,0,983	1/1:2,24:26:72.20:1174,72,0	1/1:1,22:23:30.16:887,30,0	1/1:0,18:18:21.07:555,21,0
chr10	16110234	.	GA	G	8786.96	PASS	AB=0.908;AC=37;AF=0.661;AN=56;BaseQRankSum=-4.122;DP=561;FS=9.304;HRun=6;HaplotypeScore=97.3904;InbreedingCoeff=0.2871;MQ=60.96;MQ0=2;MQRankSum=7.132;QD=17.57;ReadPosRankSum=2.233;VQSLOD=3.8443;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,28:29:69.17:742,69,0	1/1:10,0:10:29.38:235,29,0	0/0:11,0:7:17.09:0,17,203	0/0:9,0:6:14.73:0,15,164	1/1:30,1:31:83.44:775,83,0	0/0:21,0:21:26.30:0,26,190	0/1:16,0:16:20.67:21,0,74	0/1:10,25:34:99:712,0,132	0/1:12,0:12:0.62:19,0,1	1/1:23,0:23:59.27:502,59,0	1/1:18,0:18:47.38:426,47,0	1/1:2,16:18:36.09:387,36,0	0/0:10,0:10:8.90:0,9,56	0/0:10,0:10:13.09:0,13,114	1/1:0,16:16:45.11:484,45,0	1/1:3,25:28:41.93:595,42,0	1/1:30,0:30:11.55:61,12,0	1/1:0,28:28:81.20:870,81,0	0/1:25,0:22:99:389,0,134	0/1:22,0:22:68.30:267,0,68	0/1:3,7:10:37.03:199,0,37	0/1:21,0:21:28.25:265,0,28	0/1:20,0:20:88.23:98,0,88	0/1:17,0:17:23.89:24,0,37	1/1:1,26:27:72.18:774,72,0	1/1:24,0:24:71.54:669,72,0	1/1:22,0:22:30.80:163,31,0	1/1:18,0:18:19.30:113,19,0
chr10	16110235	.	A	AAAAAAG	10381.78	PASS	AB=1.000;AC=39;AF=0.696;AN=56;BaseQRankSum=-10.454;DP=571;FS=22.906;HRun=0;HaplotypeScore=130.8552;InbreedingCoeff=0.0200;MQ=61.19;MQ0=1;MQRankSum=2.197;QD=19.59;ReadPosRankSum=-2.627;VQSLOD=2.0463;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:30:99:221,0,395	0/1:10,0:10:74.05:150,0,74	0/0:9,0:7:17.09:0,17,200	0/0:9,0:6:11.45:0,11,153	1/1:31,0:31:83.23:778,83,0	1/1:6,16:23:21.07:712,21,0	1/1:2,14:17:9.03:236,9,0	1/1:35,0:34:81.13:846,81,0	1/1:0,12:12:6.02:203,6,0	0/1:23,0:23:15.17:386,0,15	1/1:18,0:18:46.73:428,47,0	0/1:18,0:18:99:190,0,114	1/1:1,8:10:9.03:305,9,0	1/1:4,6:11:6.02:204,6,0	0/1:16,0:16:99:116,0,270	0/1:28,0:28:99:298,0,197	0/1:30,0:30:2.53:3,0,90	0/1:28,0:28:99:180,0,513	1/1:6,19:24:63.18:1097,63,0	1/1:5,20:26:60.17:1267,60,0	1/1:10,0:10:21.05:274,21,0	1/1:2,17:20:42.12:796,42,0	1/1:2,18:21:29.24:554,29,0	1/1:3,14:17:9.03:288,9,0	0/1:27,0:27:99:290,0,286	0/1:24,0:24:51.24:533,0,51	0/0:23,0:23:2.07:0,2,211	0/1:18,0:18:29.59:30,0,101
chr10	16112784	.	C	CGG	1112.18	PASS	AB=1.000;AC=43;AF=0.796;AN=54;BaseQRankSum=-0.488;DP=382;FS=4.520;HRun=13;HaplotypeScore=108.3978;InbreedingCoeff=0.0556;MQ=80.82;MQ0=1;MQRankSum=0.124;QD=3.08;ReadPosRankSum=-4.316;VQSLOD=-0.6224;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:25:3.40:25,3,0	0/1:1,0:1:0:0,0,0	0/1:15,0:14:9.97:10,0,27	0/1:19,0:17:23.67:24,0,32	1/1:9,0:9:2.96:19,3,0	0/1:18,0:19:6.04:18,0,6	1/1:11,8:20:2.96:19,3,0	0/1:8,0:8:0:0,0,0	1/1:8,0:8:9.01:103,9,0	1/1:10,0:10:3.01:40,3,0	1/1:4,0:4:2.99:24,3,0	1/1:18,0:18:11.97:95,12,0	1/1:12,0:12:8.97:71,9,0	1/1:23,0:23:23.99:242,24,0	0/0:16,0:20:2.08:0,2,25	1/1:15,0:15:6.47:59,6,0	1/1:13,0:13:9.46:88,9,0	0/1:27,0:27:13.46:59,0,13	0/1:7,0:7:28.66:75,0,29	0/1:4,0:4:0:0,0,0	1/1:29,0:38:2.99:24,3,0	0/1:7,0:7:0:0,0,0	1/1:4,0:4:0.47:1,0,0	1/1:15,0:15:11.99:113,12,0	1/1:16,0:16:2.96:20,3,0	1/1:10,0:10:2.96:19,3,0	1/1:12,0:12:6.02:80,6,0	./.
chr10	16113171	.	GTT	G	3929.98	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=17.156;DP=544;FS=7.640;HRun=2;HaplotypeScore=162.9122;InbreedingCoeff=0.9934;MQ=89.15;MQ0=0;MQRankSum=-16.310;QD=24.72;ReadPosRankSum=4.122;VQSLOD=2.3836;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,120,2439	0/0:8,0:8:24.07:0,24,454	0/0:22,0:22:66.19:0,66,1259	0/0:24,0:24:72.25:0,72,1446	0/0:27,0:27:81.28:0,81,1636	1/1:0,12:12:36.01:327,36,0	1/1:1,14:16:44.72:377,45,0	1/1:0,6:6:18:164,18,0	1/1:0,10:10:23.99:225,24,0	0/0:37,0:37:99:0,108,2144	0/0:14,0:14:42.14:0,42,853	0/0:27,0:27:81.28:0,81,1636	1/1:0,23:23:68.92:620,69,0	1/1:1,20:21:62.97:565,63,0	0/0:28,0:28:84.29:0,84,1706	0/0:29,0:29:87.30:0,87,1750	0/0:30,0:30:90.31:0,90,1828	0/0:23,0:22:69.24:0,69,1402	1/1:1,8:9:26.99:245,27,0	1/1:2,12:14:39.06:405,39,0	1/1:1,4:5:14.95:122,15,0	1/1:2,15:17:47.98:439,48,0	1/1:2,15:17:36:320,36,0	1/1:2,7:9:14.86:122,15,0	0/0:13,0:13:36.12:0,36,731	0/0:24,0:24:69.24:0,69,1403	0/0:29,0:28:87.30:0,87,1765	0/0:10,0:10:30.10:0,30,610
chr10	16113174	.	CAACCCTCAAAGGCTCG	C	17038.43	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=17.628;DP=535;FS=11.092;HRun=0;HaplotypeScore=272.4618;InbreedingCoeff=0.9852;MQ=92.17;MQ0=0;MQRankSum=-16.989;QD=112.84;ReadPosRankSum=4.299;VQSLOD=3.4961;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,126,9457	0/0:7,0:7:21.07:0,21,1693	0/0:24,0:24:72.24:0,72,4440	0/0:26,0:26:78.22:0,78,4562	0/0:26,0:26:75.23:0,75,5234	1/1:0,12:12:36.12:1497,36,0	1/1:2,14:16:45.15:1839,45,0	1/1:0,6:6:18.06:749,18,0	1/1:3,7:10:24:879,24,0	0/0:34,0:34:99:0,99,7179	0/0:14,0:14:42.14:0,42,3234	0/0:28,0:28:84.29:0,84,6586	1/1:1,22:23:69.15:2733,69,0	1/1:0,20:20:60.21:2470,60,0	0/0:29,0:29:87.30:0,87,6917	0/0:27,0:27:78.27:0,78,5936	0/0:30,0:30:90.29:0,90,6360	0/0:23,0:22:69.19:0,69,5027	1/1:0,8:8:24.08:999,24,0	1/1:2,12:14:42.10:1526,42,0	1/1:0,4:4:12.04:451,12,0	1/1:0,15:15:45.15:1827,45,0	1/1:1,15:16:45.15:1703,45,0	1/1:0,7:7:9.03:365,9,0	0/0:13,0:13:36.12:0,36,2857	0/0:22,0:22:66.23:0,66,5138	0/0:29,0:28:87.30:0,87,6446	0/0:10,0:10:30.10:0,30,2407
chr10	16113933	.	TACAC	T	2789.15	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=0.905;DP=630;FS=0.000;HRun=0;HaplotypeScore=146.2364;InbreedingCoeff=0.7517;MQ=55.65;MQ0=8;MQRankSum=4.630;QD=19.78;ReadPosRankSum=4.770;VQSLOD=3.1862;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:33:3.01:0,3,52	1/1:3,7:10:18.06:288,18,0	0/0:36,0:16:5.82:0,6,96	0/0:21,0:8:6:0,6,65	1/1:6,11:18:24.08:374,24,0	0/0:19,0:21:6.02:0,6,101	0/0:31,0:34:2.99:0,3,51	0/0:34,0:34:42.14:0,42,821	0/0:22,0:24:5.61:0,6,108	1/1:7,11:20:36.08:511,36,0	1/1:4,6:11:15.04:220,15,0	0/0:15,0:20:5.91:0,6,95	0/0:15,0:15:8.31:0,8,113	0/0:22,0:22:9.92:0,10,171	0/0:14,0:22:14.94:0,15,253	0/0:20,0:26:10.20:0,10,148	1/1:12,8:21:15.05:240,15,0	0/0:18,0:22:22.79:0,23,413	0/0:21,0:22:30.05:0,30,481	0/0:9,0:12:3.01:0,3,52	0/0:44,0:44:11.72:0,12,181	0/0:19,0:19:5.69:0,6,56	0/0:21,0:21:5.98:0,6,135	0/0:23,0:22:8.76:0,9,153	0/0:10,0:18:11.84:0,12,209	1/1:11,12:25:33.08:465,33,0	1/1:9,9:20:30.09:440,30,0	1/1:6,9:15:29.84:444,30,0
chr10	16114909	.	AGGCATTTGCCCTTG	A	30385.28	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=17.694;DP=619;FS=9.553;HRun=0;HaplotypeScore=271.8978;InbreedingCoeff=0.9914;MQ=86.20;MQ0=0;MQRankSum=-16.924;QD=77.51;ReadPosRankSum=1.964;VQSLOD=3.2678;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,160,9985	1/1:0,9:9:27.09:1152,27,0	0/0:32,0:32:84.29:0,84,4746	0/0:23,0:23:66.17:0,66,3191	1/1:3,10:13:24:910,24,0	1/1:3,22:24:42.14:1791,42,0	1/1:7,20:27:45.15:1914,45,0	1/1:10,11:21:33.11:1408,33,0	1/1:4,21:25:45.15:1920,45,0	1/1:1,24:25:69.24:2891,69,0	1/1:4,8:12:18.06:708,18,0	0/0:23,0:23:66.21:0,66,3892	1/1:2,21:23:51.18:2174,51,0	1/1:3,18:21:45.15:1917,45,0	0/0:30,0:29:87.30:0,87,5440	0/0:35,0:34:99:0,99,6648	1/1:6,15:21:33.58:1408,34,0	0/0:11,0:11:30.06:0,30,1696	1/1:4,7:11:21.07:896,21,0	1/1:1,14:15:39.13:1575,39,0	1/1:13,22:35:42.55:1568,43,0	1/1:3,19:22:45.15:1908,45,0	1/1:2,11:13:30.10:1278,30,0	1/1:5,17:22:14.78:529,15,0	0/0:20,0:20:60.21:0,60,4032	1/1:6,24:30:72.23:2775,72,0	1/1:3,8:11:15.05:640,15,0	1/1:3,8:11:24.08:1023,24,0
chr10	16115079	.	T	TACAC	7123.44	PASS	AB=1.000;AC=49;AF=0.907;AN=54;BaseQRankSum=-2.106;DP=583;FS=12.936;HRun=0;HaplotypeScore=136.6307;InbreedingCoeff=0.4790;MQ=63.77;MQ0=5;MQRankSum=1.320;QD=13.70;ReadPosRankSum=2.541;VQSLOD=3.9485;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:34,0:32:2.27:62,2,0	1/1:12,0:12:14.37:205,14,0	0/0:28,0:23:8.76:0,9,105	0/0:27,0:25:9:0,9,116	1/1:14,0:11:2.99:23,3,0	1/1:11,17:30:27.08:589,27,0	1/1:17,11:27:18.06:430,18,0	1/1:28,3:31:23.86:357,24,0	1/1:8,11:19:30.10:694,30,0	1/1:21,0:17:9.03:163,9,0	1/1:14,0:14:3.01:65,3,0	0/1:15,0:14:3.19:82,0,3	1/1:7,7:16:15.05:341,15,0	1/1:6,11:17:21.07:501,21,0	1/1:21,0:20:6.02:117,6,0	1/1:32,0:30:18.03:260,18,0	1/1:18,0:15:9.01:122,9,0	./.	1/1:13,6:18:19.58:373,20,0	1/1:9,11:21:26.68:570,27,0	1/1:18,14:38:24.08:549,24,0	1/1:13,0:13:11.68:157,12,0	1/1:7,5:16:23.55:445,24,0	1/1:8,9:19:14.95:327,15,0	1/1:28,0:24:14.97:296,15,0	1/1:30,0:29:15.04:214,15,0	1/1:7,0:7:7.82:77,8,0	1/1:5,0:6:6.02:105,6,0
chr10	16115552	.	GA	G	16441.63	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=9.294;DP=679;FS=3.800;HRun=1;HaplotypeScore=67.9109;InbreedingCoeff=0.9917;MQ=84.73;MQ0=0;MQRankSum=-3.044;QD=38.42;ReadPosRankSum=2.470;VQSLOD=5.6733;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,24:24:66.22:923,66,0	0/0:15,0:15:45.15:0,45,719	0/0:18,0:18:48.16:0,48,733	0/0:26,0:26:77.48:0,77,1190	0/0:39,0:39:99:0,111,1767	1/1:0,33:33:75.25:1049,75,0	1/1:0,14:14:42.14:587,42,0	1/1:0,31:31:93.27:1248,93,0	1/1:0,19:19:51.17:713,51,0	0/0:32,0:32:96.32:0,96,1501	0/0:27,0:27:75.26:0,75,1195	1/1:0,20:20:57.19:797,57,0	1/1:0,19:19:57.19:797,57,0	1/1:0,19:19:57.19:797,57,0	1/1:0,24:24:60.20:839,60,0	1/1:0,24:24:72.24:1007,72,0	0/0:17,0:17:51.17:0,51,815	1/1:1,20:21:9.25:707,9,0	1/1:0,24:24:72.22:978,72,0	1/1:0,27:27:69.23:965,69,0	1/1:0,18:18:51.17:713,51,0	1/1:0,33:33:93.31:1300,93,0	1/1:0,24:24:66.22:923,66,0	1/1:0,23:23:69.23:965,69,0	1/1:0,31:31:81.27:1132,81,0	0/0:30,0:30:90.30:0,90,1417	0/0:32,0:32:96.31:0,96,1494	0/0:15,0:15:45.15:0,45,719
chr10	16115851	.	C	CTTTTT	10021.75	PASS	AB=1.000;AC=42;AF=0.750;AN=56;BaseQRankSum=-12.375;DP=606;FS=8.263;HRun=11;HaplotypeScore=123.5793;InbreedingCoeff=0.8128;MQ=70.17;MQ0=4;MQRankSum=1.336;QD=21.65;ReadPosRankSum=-5.512;VQSLOD=0.9530;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:29.38:0,29,377	1/1:5,1:13:26.96:394,27,0	0/1:32,0:22:22.32:22,0,176	0/0:15,0:13:13.87:0,14,230	1/1:7,27:35:63.38:997,63,0	1/1:3,1:20:18.05:296,18,0	1/1:5,0:16:18.06:259,18,0	1/1:12,0:27:40.14:457,40,0	1/1:0,0:16:27.09:443,27,0	1/1:4,14:18:35.03:427,35,0	1/1:6,17:24:35.99:590,36,0	0/0:16,0:16:10.53:0,11,176	1/1:1,0:23:15.05:235,15,0	1/1:15,0:23:42.35:645,42,0	0/0:22,0:22:35.90:0,36,300	0/1:18,0:18:2.84:3,0,161	1/1:4,17:22:14.68:273,15,0	0/0:24,0:24:45.85:0,46,394	1/1:5,0:16:41.77:465,42,0	1/1:8,1:26:60.05:837,60,0	1/1:5,0:6:17.96:186,18,0	1/1:4,0:15:27.94:358,28,0	1/1:4,3:28:35.55:616,36,0	1/1:1,0:9:9.03:154,9,0	0/0:36,0:36:57.63:0,58,607	1/1:3,27:34:79.80:1182,80,0	1/1:2,20:26:26.45:565,26,0	1/1:1,9:12:24.08:617,24,0
chr10	16115858	.	TTTTTG	T	1989.62	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-0.459;DP=602;FS=6.441;HRun=0;HaplotypeScore=141.9213;InbreedingCoeff=0.9587;MQ=68.33;MQ0=4;MQRankSum=-3.148;QD=14.11;ReadPosRankSum=7.105;VQSLOD=1.6954;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:26,1:27:47.23:364,47,0	0/0:13,0:13:29.98:0,30,464	0/0:32,0:21:12.20:0,12,413	0/0:15,0:12:10.44:0,10,339	0/0:35,0:35:48.73:0,49,1026	0/0:20,0:20:24.01:0,24,381	0/0:16,0:16:21.03:0,21,419	0/0:27,0:25:60.01:0,60,842	0/0:16,0:16:27.09:0,27,596	0/0:17,0:17:38.96:0,39,526	0/0:24,0:23:42.04:0,42,650	1/1:13,2:15:31.09:286,31,0	0/0:22,0:22:15.05:0,15,310	0/0:24,0:24:65.88:0,66,1045	1/1:17,3:20:38.86:386,39,0	1/1:17,0:17:8.55:135,9,0	0/0:23,0:23:18.05:0,18,342	1/1:24,0:24:47.71:358,48,0	0/0:15,0:15:39.05:0,39,617	0/0:29,0:29:71.87:0,72,1118	0/0:7,0:7:20.81:0,21,234	0/0:15,0:16:35.08:0,35,457	0/0:29,0:29:45.19:0,45,808	0/0:9,0:9:12.03:0,12,219	1/1:36,2:37:77.61:644,78,0	0/0:33,0:33:90.21:0,90,1546	0/0:25,0:25:29.54:0,30,610	0/0:14,0:14:33.11:0,33,713
chr10	16115859	.	TTTTG	T	4270.57	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-6.262;DP=594;FS=15.053;HRun=0;HaplotypeScore=124.6844;InbreedingCoeff=0.9679;MQ=67.93;MQ0=4;MQRankSum=-3.378;QD=30.29;ReadPosRankSum=5.795;VQSLOD=3.7759;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,22:27:53.96:768,54,0	0/0:13,0:13:29.92:0,30,374	0/0:31,0:20:22.72:0,23,380	0/0:14,0:11:15.01:0,15,308	0/0:32,0:32:62.54:0,63,839	0/0:21,0:21:23.85:0,24,311	0/0:15,0:15:24.02:0,24,362	0/0:26,0:24:56.41:0,56,687	0/0:16,0:16:27.09:0,27,469	0/0:16,0:16:35.60:0,36,390	0/0:25,0:24:43.14:0,43,509	1/1:5,10:15:33:460,33,0	0/0:23,0:23:18.05:0,18,266	0/0:25,0:25:59.53:0,60,796	1/1:6,14:20:39.13:610,39,0	1/1:2,15:17:21.96:357,22,0	0/0:23,0:23:18.03:0,18,271	1/1:1,23:24:48.16:790,48,0	0/0:15,0:15:17.66:0,18,425	0/0:27,0:27:52.07:0,52,887	0/0:7,0:7:12.77:0,13,156	0/0:16,0:16:9.84:0,10,323	0/0:27,0:27:29.27:0,29,618	0/0:9,0:9:12.03:0,12,176	1/1:5,33:37:81.23:1285,81,0	0/0:33,0:33:89.74:0,90,1136	0/0:25,0:25:29.76:0,30,486	0/0:14,0:14:33.11:0,33,576
chr10	16116267	.	AC	A	5549.92	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=9.958;DP=776;FS=1.024;HRun=5;HaplotypeScore=79.3836;InbreedingCoeff=0.9996;MQ=89.37;MQ0=0;MQRankSum=-1.712;QD=30.49;ReadPosRankSum=4.396;VQSLOD=5.3259;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,114,1553	1/1:0,16:16:42.12:476,42,0	0/0:31,0:31:90.28:0,90,1201	0/0:26,0:26:72.11:0,72,895	1/1:1,20:21:63.18:714,63,0	0/0:29,0:29:81.24:0,81,1075	0/0:29,0:29:81.25:0,81,1089	0/0:34,0:34:87.29:0,87,1189	0/0:41,0:41:99:0,120,1636	1/1:2,33:35:95.29:1116,95,0	1/1:0,16:16:39.11:442,39,0	0/0:22,0:22:66.19:0,66,869	0/0:28,0:28:84.25:0,84,1116	0/0:30,0:30:87.29:0,87,1186	0/0:34,0:34:99:0,102,1378	0/0:23,0:23:66.22:0,66,903	1/1:1,19:20:48.14:545,48,0	0/0:37,0:37:99:0,102,1394	0/0:23,0:23:63.16:0,63,812	0/0:29,0:29:75.25:0,75,1022	0/0:38,0:38:99:0,108,1445	0/0:24,0:24:72.23:0,72,967	0/0:20,0:20:54.17:0,54,715	0/0:37,0:37:99:0,108,1395	0/0:19,0:19:57.11:0,57,742	1/1:1,28:29:84.22:940,84,0	1/1:3,32:35:93.25:1044,93,0	1/1:2,8:10:24.07:272,24,0
chr10	16117108	.	GA	G	10931.30	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-4.646;DP=547;FS=0.000;HRun=10;HaplotypeScore=70.1295;InbreedingCoeff=0.8123;MQ=79.22;MQ0=1;MQRankSum=-4.671;QD=21.43;ReadPosRankSum=4.660;VQSLOD=5.4007;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,20:26:23.79:435,24,0	1/1:3,12:15:38.97:334,39,0	0/0:24,0:19:39.21:0,39,345	0/0:12,0:13:0.27:0,0,82	1/1:9,20:30:74.81:615,75,0	1/1:2,29:31:83.98:729,84,0	1/1:3,11:14:26.99:234,27,0	1/1:5,26:31:77.92:666,78,0	1/1:2,14:16:41.99:365,42,0	1/1:4,20:24:59.99:521,60,0	1/1:0,21:21:59.88:510,60,0	1/1:1,12:13:29.99:260,30,0	1/1:2,13:15:26:254,26,0	1/1:0,12:12:32.99:286,33,0	1/1:2,19:21:44.99:391,45,0	1/1:2,20:22:56.98:495,57,0	1/1:3,13:16:41.97:359,42,0	1/1:1,23:24:59.98:521,60,0	1/1:2,28:30:86.93:747,87,0	1/1:0,15:15:41.99:365,42,0	1/1:1,5:6:15:130,15,0	1/1:1,18:19:50.98:442,51,0	1/1:2,14:16:29.99:260,30,0	1/1:0,11:11:26.99:234,27,0	1/1:0,14:14:41.99:364,42,0	1/1:5,26:31:77.92:664,78,0	1/1:3,20:23:50.99:443,51,0	1/1:5,9:14:8.82:305,9,0
chr10	16117194	.	GTT	G	3669.71	PASS	AB=0.771;AC=16;AF=0.286;AN=56;BaseQRankSum=10.956;DP=536;FS=10.645;HRun=12;HaplotypeScore=71.0962;InbreedingCoeff=0.8500;MQ=74.18;MQ0=0;MQRankSum=-0.024;QD=20.16;ReadPosRankSum=3.233;VQSLOD=2.0452;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:25:65.70:0,66,926	0/1:4,5:9:6.98:135,0,7	0/0:16,0:14:9.07:0,9,267	0/1:16,0:16:5.03:5,0,143	1/1:3,28:31:78.13:793,78,0	0/0:25,0:27:63.11:0,63,1044	0/0:12,0:12:33.11:0,33,491	0/0:31,0:32:71.72:0,72,1017	0/0:15,0:15:42.14:0,42,619	1/1:2,23:25:63.11:641,63,0	1/1:7,18:25:55.80:577,56,0	0/0:19,0:19:51.15:0,51,722	0/0:15,0:15:36.11:0,36,516	0/0:17,0:17:44.98:0,45,584	0/0:17,0:18:41.62:0,42,571	0/0:20,0:20:54.18:0,54,805	1/1:1,19:20:51.11:519,51,0	0/0:13,0:13:30.10:0,30,439	0/0:23,0:23:43.43:0,43,571	0/0:28,0:28:75.23:0,75,1080	0/0:7,0:7:21.07:0,21,313	0/0:11,0:11:33.11:0,33,492	0/0:23,0:25:60.17:0,60,825	0/0:16,0:16:39.12:0,39,563	0/0:14,0:14:33.11:0,33,479	1/1:9,10:20:38.52:359,39,0	1/1:7,12:19:36.05:366,36,0	1/1:4,10:14:27.06:275,27,0
chr10	16118869	.	A	AT	14834.29	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-17.548;DP=728;FS=6.780;HRun=6;HaplotypeScore=65.2958;InbreedingCoeff=0.9999;MQ=80.63;MQ0=0;MQRankSum=-2.130;QD=30.71;ReadPosRankSum=1.231;VQSLOD=5.4940;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,45:49:99:1472,117,0	0/0:15,0:15:45.07:0,45,449	0/0:26,0:26:64.89:0,65,621	0/0:13,0:12:30.05:0,30,299	0/0:32,0:32:78.17:0,78,795	1/1:0,30:30:78.12:958,78,0	1/1:2,29:31:78.25:981,78,0	1/1:5,29:34:87.21:1026,87,0	1/1:1,19:20:48.11:586,48,0	0/0:19,0:19:54.11:0,54,546	0/0:18,0:18:45.08:0,45,454	1/1:1,34:35:93.30:1170,93,0	1/1:2,25:28:66.21:829,66,0	1/1:2,18:20:45.14:559,45,0	1/1:3,28:31:80.85:991,81,0	1/1:1,24:25:57.18:717,57,0	0/0:35,0:35:96.21:0,96,979	1/1:3,16:19:42.13:528,42,0	1/1:2,17:19:51.13:604,51,0	1/1:1,20:21:57.18:717,57,0	1/1:1,26:27:75.24:943,75,0	1/1:3,15:18:33.11:415,33,0	1/1:3,17:20:45.14:563,45,0	1/1:4,31:35:87.28:1094,87,0	1/1:1,20:21:54.17:679,54,0	0/0:40,0:40:99:0,114,1145	0/0:34,0:34:99:0,101,987	0/0:13,0:13:39.09:0,39,398
chr10	16119588	.	CT	C	19635.85	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=12.720;DP=743;FS=2.398;HRun=1;HaplotypeScore=70.2878;InbreedingCoeff=0.9993;MQ=87.42;MQ0=0;MQRankSum=-5.392;QD=38.96;ReadPosRankSum=2.178;VQSLOD=5.6555;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,56:56:99:2139,154,0	0/0:14,0:14:42.14:0,42,669	0/0:25,0:25:75.01:0,75,1115	0/0:24,0:24:69.19:0,69,1061	0/0:24,0:24:69.24:0,69,1103	1/1:0,25:25:72.24:1007,72,0	1/1:0,21:21:57.19:797,57,0	1/1:0,50:50:99:2003,147,0	1/1:0,15:15:42.14:586,42,0	0/0:26,0:26:78.27:0,78,1246	0/0:20,0:20:60.20:0,60,954	1/1:0,37:37:99:1468,105,0	1/1:0,12:12:30.10:419,30,0	1/1:0,22:22:60.20:839,60,0	1/1:0,24:24:66.22:922,66,0	1/1:0,36:36:99:1385,99,0	0/0:37,0:37:99:0,111,1770	1/1:0,39:39:99:1510,108,0	1/1:0,20:20:60.18:819,60,0	1/1:0,22:22:66.22:919,66,0	1/1:6,35:41:99:1641,120,0	1/1:0,21:21:63.21:877,63,0	1/1:0,17:17:48.16:669,48,0	1/1:0,28:28:69.23:965,69,0	1/1:0,18:18:48.16:671,48,0	0/0:38,0:38:99:0,111,1775	0/0:24,0:23:72.23:0,72,1121	0/0:7,0:7:21.07:0,21,336
chr10	16119734	.	AT	A	9662.54	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=13.742;DP=622;FS=0.951;HRun=2;HaplotypeScore=62.0672;InbreedingCoeff=0.9995;MQ=79.87;MQ0=0;MQRankSum=-0.947;QD=35.66;ReadPosRankSum=0.258;VQSLOD=5.2075;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:99:0,99,1459	0/0:8,0:8:24.08:0,24,356	0/0:12,0:12:36.11:0,36,520	0/0:17,0:17:51.17:0,51,744	0/0:27,0:27:81.27:0,81,1196	1/1:1,18:19:51.17:662,51,0	1/1:1,13:14:39.13:506,39,0	1/1:1,39:40:99:1464,114,0	1/1:0,16:16:48.16:623,48,0	0/0:19,0:19:57.16:0,57,800	0/0:20,0:20:60.20:0,60,897	0/0:21,0:21:60.20:0,60,899	1/1:0,25:25:72.23:935,72,0	1/1:0,22:22:63.20:818,63,0	0/0:31,0:31:93.32:0,93,1393	0/0:21,0:21:63.21:0,63,944	0/0:40,0:40:99:0,117,1750	0/0:22,0:22:66.18:0,66,961	1/1:1,18:19:51.12:642,51,0	1/1:0,19:19:48.16:623,48,0	1/1:2,40:42:99:1402,108,0	1/1:0,21:21:54.18:701,54,0	1/1:0,9:9:27.09:350,27,0	1/1:0,25:25:72.23:935,72,0	0/0:23,0:23:69.23:0,69,1034	0/0:20,0:20:60.19:0,60,879	0/0:23,0:23:69.23:0,69,1033	0/0:14,0:14:42.14:0,42,628
chr10	16120353	.	GTTCCTC	G	16846.52	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=0.087;DP=525;FS=3.259;HRun=0;HaplotypeScore=136.1503;InbreedingCoeff=0.8911;MQ=80.00;MQ0=0;MQRankSum=-8.378;QD=35.17;ReadPosRankSum=6.614;VQSLOD=4.1608;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,30:36:38.96:874,39,0	1/1:0,4:4:9.03:202,9,0	0/0:17,0:17:41.78:0,42,1332	0/0:29,0:29:53.61:0,54,1327	1/1:2,16:18:18.53:368,19,0	1/1:4,17:21:33.11:741,33,0	1/1:4,28:32:75.26:1682,75,0	1/1:6,10:16:30.10:652,30,0	1/1:0,20:20:39.13:875,39,0	1/1:2,13:15:39.13:876,39,0	1/1:1,12:13:11.73:228,12,0	1/1:1,18:19:48.16:1076,48,0	1/1:3,14:17:27.09:604,27,0	1/1:0,12:12:20.92:471,21,0	1/1:2,13:15:33.11:741,33,0	1/1:3,17:20:48.16:1077,48,0	1/1:9,10:19:20.55:533,21,0	1/1:4,9:13:18.06:404,18,0	1/1:5,15:20:45.14:955,45,0	1/1:0,16:16:12.04:268,12,0	1/1:11,22:33:19.31:464,19,0	1/1:3,15:18:18.06:404,18,0	1/1:1,17:18:18.06:397,18,0	1/1:5,17:22:24.08:536,24,0	1/1:4,13:17:24.08:538,24,0	1/1:3,17:20:48.13:1007,48,0	1/1:2,17:19:30.10:673,30,0	1/1:0,6:6:9.03:202,9,0
chr10	16120594	.	G	GAGA	5972.58	PASS	AB=0.578;AC=35;AF=0.625;AN=56;BaseQRankSum=-0.670;DP=554;FS=2.823;HRun=0;HaplotypeScore=154.4658;InbreedingCoeff=0.9006;MQ=62.63;MQ0=11;MQRankSum=-2.280;QD=16.23;ReadPosRankSum=-0.205;VQSLOD=4.8428;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:44,0:43:19.39:418,19,0	0/0:8,0:7:20.99:0,21,267	0/0:22,0:13:33.11:0,33,539	0/0:35,0:27:60.03:0,60,849	0/0:9,0:9:24.08:0,24,406	1/1:11,0:11:24.81:230,25,0	0/1:7,19:26:6.62:115,0,7	1/1:17,0:14:20.18:280,20,0	1/1:14,1:16:37.23:552,37,0	0/0:30,0:30:78.05:0,78,1149	0/0:11,0:11:33.11:0,33,537	1/1:25,0:23:23.25:330,23,0	1/1:15,0:15:21.73:363,22,0	1/1:22,0:23:52.09:562,52,0	1/1:21,0:21:17.72:231,18,0	1/1:31,0:31:26.40:309,26,0	0/0:27,0:27:77.87:0,78,1195	1/1:16,0:16:4.83:139,5,0	1/1:11,0:11:25.87:307,26,0	1/1:11,0:11:30:337,30,0	1/1:5,28:32:10.61:120,11,0	1/1:10,1:11:23.16:315,23,0	1/1:14,1:15:27.08:451,27,0	1/1:26,3:29:44.89:812,45,0	1/1:13,0:13:10.79:101,11,0	0/0:23,0:23:60.21:0,60,1011	0/0:7,0:7:21.07:0,21,347	0/0:14,0:14:36.11:0,36,584
chr10	16120614	.	GGAA	G	4553.46	PASS	AB=0.990;AC=29;AF=0.518;AN=56;BaseQRankSum=7.237;DP=519;FS=12.775;HRun=0;HaplotypeScore=147.0874;InbreedingCoeff=0.4608;MQ=47.73;MQ0=24;MQRankSum=-6.822;QD=13.20;ReadPosRankSum=1.460;VQSLOD=3.6743;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:51,0:49:99:187,0,655	0/0:5,0:4:2.43:0,2,86	0/0:16,1:4:5.66:0,6,137	0/0:33,0:15:26.90:0,27,477	0/0:11,0:11:26.35:0,26,346	1/1:2,8:10:13.43:217,13,0	1/1:15,1:15:20.89:266,21,0	0/1:24,2:18:53.70:77,0,54	1/1:1,15:16:30.08:458,30,0	0/0:31,0:30:64.54:0,65,942	0/0:8,0:8:16.53:0,17,201	0/1:17,0:15:68.71:144,0,69	1/1:3,11:14:27.09:425,27,0	1/1:1,18:19:42.08:610,42,0	0/1:20,0:19:33.94:101,0,34	0/1:27,0:26:1.02:188,0,1	0/0:27,0:27:68.30:0,68,1118	0/1:16,0:15:48.40:48,0,123	1/1:6,6:11:15.35:232,15,0	1/1:2,6:7:8.98:112,9,0	1/1:24,1:22:9.88:212,10,0	1/1:4,9:12:21.07:312,21,0	1/1:1,10:11:24.08:343,24,0	1/1:5,22:27:38.98:575,39,0	0/1:17,0:17:46.10:46,0,156	0/0:23,0:23:39.19:0,39,695	0/0:5,0:5:12.29:0,12,150	0/0:14,0:14:35.51:0,36,578
chr10	16120617	.	A	AGAG	1499.83	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=4.622;DP=526;FS=18.611;HRun=0;HaplotypeScore=167.6308;InbreedingCoeff=0.3867;MQ=46.17;MQ0=27;MQRankSum=-3.670;QD=4.82;ReadPosRankSum=-0.827;VQSLOD=1.3064;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:49,0:47:79.40:631,79,0	0/1:6,0:5:3.13:3,0,21	0/0:18,0:5:9.03:0,9,117	0/0:32,0:13:24.03:0,24,333	0/0:12,0:12:21.32:0,21,183	0/0:11,0:11:7.01:0,7,40	0/1:16,0:15:15.56:16,0,20	0/0:25,0:17:10.03:0,10,120	1/1:17,0:17:0.36:23,0,0	0/0:32,0:31:36.40:0,36,467	0/0:9,0:9:8.42:0,8,72	1/1:17,0:15:28.30:149,28,0	0/1:13,0:14:7.66:8,0,63	0/0:19,0:19:17.85:0,18,116	1/1:9,10:20:19.57:127,20,0	1/1:14,15:28:31.71:164,32,0	0/0:27,0:27:45.47:0,45,520	1/1:16,0:15:16.82:248,17,0	0/1:12,0:10:19.34:40,0,19	0/0:7,0:6:2.79:0,3,13	0/1:22,0:19:0.21:0,0,19	0/1:12,0:11:1.47:1,0,28	0/1:12,0:12:11.17:31,0,11	0/1:29,0:29:2.73:3,0,53	1/1:17,0:17:19.34:234,19,0	0/1:22,0:22:0.26:0,0,283	0/0:8,0:8:12.43:0,12,99	0/0:14,0:14:35.88:0,36,297
chr10	16120620	.	GGAA	G	1956.36	PASS	AB=0.942;AC=27;AF=0.482;AN=56;BaseQRankSum=7.389;DP=556;FS=3.068;HRun=0;HaplotypeScore=163.2251;InbreedingCoeff=-0.5495;MQ=46.31;MQ0=25;MQRankSum=-5.244;QD=4.00;ReadPosRankSum=2.766;VQSLOD=2.4087;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:43,6:47:99:293,0,186	0/1:6,0:5:28.27:29,0,28	0/0:15,0:4:9.03:0,9,169	0/0:38,0:15:29.85:0,30,420	0/1:13,0:13:23.08:23,0,207	1/1:11,0:11:9.56:53,10,0	0/1:17,0:16:21.08:21,0,28	0/1:25,0:16:1.35:1,0,158	0/1:18,0:18:15.99:77,0,16	0/1:32,0:31:40.09:40,0,560	0/1:9,0:9:82.04:82,0,86	0/1:7,10:15:5.81:211,0,6	0/1:16,0:16:6.18:99,0,6	0/1:20,0:20:4.88:114,0,5	0/1:17,5:21:8.40:145,0,8	0/1:20,11:30:26.53:268,0,27	0/1:26,0:26:6.18:6,0,595	0/1:12,3:14:4.35:130,0,4	0/1:17,0:15:54.84:55,0,126	1/1:7,0:6:2.50:9,2,0	0/1:29,0:25:12.50:12,0,55	0/1:12,0:11:8.57:31,0,9	0/1:14,0:14:22.52:26,0,23	0/1:30,0:30:43.34:70,0,43	0/1:13,6:19:81.86:165,0,82	0/1:24,0:24:97.25:97,0,338	0/1:10,0:10:48.57:49,0,101	0/0:14,0:14:19.94:0,20,358
chr10	16120632	.	GGAA	G	1723.09	PASS	AB=0.910;AC=19;AF=0.352;AN=54;BaseQRankSum=7.911;DP=561;FS=5.306;HRun=0;HaplotypeScore=162.5540;InbreedingCoeff=-0.1758;MQ=46.14;MQ0=28;MQRankSum=-5.784;QD=4.85;ReadPosRankSum=3.953;VQSLOD=2.3356;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:35,6:40:99:224,0,222	0/0:5,0:4:2.80:0,3,69	0/0:23,0:8:8.32:0,8,156	0/0:51,0:18:0.65:0,1,402	0/0:12,0:12:29.99:0,30,487	1/1:8,0:8:11.99:69,12,0	0/1:16,0:15:18.81:76,0,19	0/1:26,0:17:18.33:18,0,194	0/1:16,0:16:16.34:54,0,16	0/0:30,0:29:87.18:0,87,1520	0/0:7,0:7:15.04:0,15,265	0/1:11,10:19:10.23:255,0,10	1/1:19,0:19:0.44:136,0,0	0/1:18,0:18:0.45:156,0,0	0/1:15,5:19:0.06:178,0,0	0/1:17,11:27:3.13:310,0,3	0/0:25,0:25:62.43:0,62,1464	0/1:13,3:15:24.65:88,0,25	0/1:19,0:14:36.54:37,0,138	./.	0/1:30,0:26:27.71:28,0,54	0/1:15,0:14:20.48:33,0,20	0/1:18,0:18:22.65:23,0,42	0/1:27,0:27:61.78:62,0,66	0/1:11,6:17:91.15:132,0,91	0/0:26,0:26:71.27:0,71,1196	0/0:10,0:10:26.81:0,27,424	0/0:14,0:14:38.96:0,39,633
chr10	16120635	.	A	AGAG	1354.93	PASS	AB=0.939;AC=16;AF=0.296;AN=54;BaseQRankSum=4.282;DP=572;FS=17.323;HRun=0;HaplotypeScore=169.2827;InbreedingCoeff=0.4626;MQ=48.65;MQ0=27;MQRankSum=-2.374;QD=4.72;ReadPosRankSum=0.333;VQSLOD=1.7857;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:39,0:38:46.30:266,46,0	0/0:4,0:3:0.48:0,0,44	0/0:30,0:12:6.43:0,6,172	0/1:54,0:18:6.10:6,0,363	0/0:12,0:12:29.96:0,30,369	0/0:8,0:8:9.45:0,9,95	0/1:16,0:15:1.38:1,0,114	0/1:24,0:15:9.04:9,0,28	0/0:16,0:16:12.98:0,13,115	0/0:33,0:32:87.03:0,87,1223	0/0:6,0:6:15.05:0,15,224	1/1:23,0:21:42.53:330,43,0	0/0:18,0:18:2.67:0,3,188	0/0:19,0:19:8.36:0,8,292	1/1:21,0:20:30.18:260,30,0	1/1:29,0:28:48.79:339,49,0	0/0:25,0:25:58.79:0,59,1056	0/1:8,8:16:3.43:70,0,3	0/1:18,0:13:19.39:19,0,45	./.	0/0:31,0:27:5.76:0,6,148	0/0:17,0:16:17.77:0,18,147	0/0:16,0:16:19:0,19,123	0/1:26,0:26:2.53:3,0,123	1/1:19,0:19:12.44:222,12,0	0/0:24,0:24:66.01:0,66,943	0/0:11,0:11:24.07:0,24,346	0/0:13,0:13:30.08:0,30,418
chr10	16122007	.	G	GA	21112.38	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=4.230;DP=773;FS=2.477;HRun=1;HaplotypeScore=138.3807;InbreedingCoeff=0.9996;MQ=75.45;MQ0=0;MQRankSum=-10.002;QD=38.81;ReadPosRankSum=0.869;VQSLOD=4.4734;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,45:51:99:1819,114,0	0/0:11,0:11:30.08:0,30,399	0/0:25,0:24:69.02:0,69,964	0/0:26,0:26:72.24:0,72,983	0/0:20,0:20:60.18:0,60,821	1/1:2,25:27:69.22:1077,69,0	1/1:7,18:26:63.21:979,63,0	1/1:7,37:45:99:2109,135,0	1/1:4,21:25:60.20:948,60,0	0/0:32,0:31:93.31:0,93,1298	0/0:15,0:15:42.14:0,42,585	1/1:1,30:32:81.28:1292,81,0	1/1:1,15:16:48.16:758,48,0	1/1:4,22:26:72.21:1098,72,0	1/1:1,39:40:99:1675,105,0	1/1:2,38:41:99:1818,114,0	0/0:37,0:37:99:0,105,1468	1/1:0,22:20:51.17:814,51,0	1/1:2,23:25:75.26:1198,75,0	1/1:3,16:19:26.47:718,26,0	1/1:4,32:37:60.20:955,60,0	1/1:2,20:24:45.14:696,45,0	1/1:3,12:16:30.10:478,30,0	1/1:2,33:36:69.24:1100,69,0	1/1:3,33:36:99:1580,99,0	0/0:27,0:27:81.27:0,81,1132	0/0:26,0:26:78.26:0,78,1091	0/0:10,0:10:30.10:0,30,419
chr10	16122031	.	C	CT	17259.38	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=7.190;DP=791;FS=2.477;HRun=3;HaplotypeScore=148.6436;InbreedingCoeff=0.9999;MQ=78.56;MQ0=0;MQRankSum=-13.861;QD=32.20;ReadPosRankSum=-0.919;VQSLOD=3.8046;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,53:58:99:1898,141,0	0/0:11,0:11:33.10:0,33,396	0/0:26,0:25:59.87:0,60,678	0/0:30,0:30:74.42:0,74,834	0/0:25,0:25:69.20:0,69,815	1/1:4,16:20:48.06:610,48,0	1/1:4,24:28:66.12:848,66,0	1/1:4,35:39:99:1462,108,0	1/1:3,23:26:66.15:898,66,0	0/0:29,0:28:81.24:0,81,961	0/0:15,0:15:39.12:0,39,467	1/1:3,28:31:66.22:917,66,0	1/1:3,18:21:54.11:731,54,0	1/1:0,25:25:69.18:941,69,0	1/1:1,37:38:96.32:1337,96,0	1/1:2,40:42:99:1460,108,0	0/0:44,0:44:99:0,124,1495	1/1:4,19:23:48.14:653,48,0	1/1:0,20:20:60.20:826,60,0	1/1:3,17:20:48.16:665,48,0	1/1:8,33:41:84.15:1083,84,0	1/1:1,23:24:60.05:770,60,0	1/1:3,16:19:30.03:397,30,0	1/1:4,32:36:62.82:838,63,0	1/1:1,24:25:69.16:925,69,0	0/0:35,0:35:90.27:0,90,1080	0/0:26,0:26:69.21:0,69,828	0/0:14,0:14:39.12:0,39,466
chr10	16123460	.	ACCATGTTACG	A	36996.75	PASS	AB=0.569;AC=51;AF=0.911;AN=56;BaseQRankSum=0.873;DP=559;FS=46.621;HRun=0;HaplotypeScore=202.2300;InbreedingCoeff=0.7580;MQ=72.38;MQ0=0;MQRankSum=-8.833;QD=70.47;ReadPosRankSum=6.194;VQSLOD=3.0042;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,27:30:48.16:1373,48,0	1/1:1,10:11:30.10:965,30,0	0/0:18,0:18:45.15:0,45,1618	0/0:16,0:16:36.12:0,36,1606	1/1:2,17:19:39.13:1201,39,0	1/1:0,15:15:39.13:1261,39,0	1/1:0,26:26:63.22:2032,63,0	1/1:2,21:23:63.19:1943,63,0	1/1:4,17:21:48.16:1552,48,0	1/1:3,11:14:33.11:1068,33,0	1/1:2,9:11:24.08:776,24,0	1/1:2,23:25:72.25:2328,72,0	1/1:2,23:25:60.21:1939,60,0	1/1:1,23:24:60.21:1939,60,0	1/1:3,31:34:84.29:2689,84,0	1/1:1,30:31:78.20:2443,78,0	1/1:4,12:16:30.10:911,30,0	1/1:2,10:12:30.10:971,30,0	1/1:6,15:21:48.15:1428,48,0	1/1:2,12:14:36.12:1142,36,0	0/1:8,25:33:99:1159,0,115	1/1:4,21:25:48.16:1467,48,0	1/1:2,11:13:24.07:776,24,0	1/1:3,13:16:24.08:659,24,0	1/1:6,17:23:48.64:1494,49,0	1/1:1,13:14:36.12:1153,36,0	1/1:1,25:26:63.22:2038,63,0	1/1:0,3:3:9.03:291,9,0
chr10	16124083	.	A	ATG	25308.24	PASS	AB=0.616;AC=47;AF=0.839;AN=56;BaseQRankSum=-4.703;DP=858;FS=7.208;HRun=0;HaplotypeScore=126.2855;InbreedingCoeff=0.1266;MQ=68.11;MQ0=6;MQRankSum=3.355;QD=30.68;ReadPosRankSum=3.521;VQSLOD=6.5103;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,30:44:44.60:1229,45,0	0/1:3,7:10:15.60:271,0,16	0/0:31,0:18:16.80:0,17,122	0/1:29,0:15:9.86:10,0,76	1/1:10,23:33:54.18:876,54,0	0/1:2,26:28:1.09:999,0,1	1/1:6,24:30:20.52:840,21,0	1/1:17,26:43:41.59:1158,42,0	1/1:5,30:35:56.57:1241,57,0	1/1:4,23:27:66.23:1065,66,0	0/1:8,14:22:28.13:577,0,28	0/1:4,23:27:7.11:907,0,7	1/1:5,27:32:38.59:1131,39,0	1/1:7,21:29:63.22:1020,63,0	1/1:4,38:43:96.33:1558,96,0	0/1:2,23:26:7.12:907,0,7	1/1:4,30:34:66.23:1071,66,0	1/1:1,12:14:36.12:584,36,0	1/1:8,12:20:33.11:528,33,0	1/1:1,27:28:72.25:1164,72,0	1/1:15,50:68:62.16:2020,62,0	1/1:7,25:32:23.53:888,24,0	1/1:9,25:34:27.02:937,27,0	1/1:4,25:30:63.22:1022,63,0	1/1:7,18:25:11.50:694,11,0	1/1:7,31:39:93.32:1504,93,0	1/1:12,22:33:23.53:884,24,0	0/1:1,7:8:18.60:225,0,19
chr10	16124601	.	CGTTTGTTTGTTT	C	13532.92	PASS	AB=0.750;AC=35;AF=0.625;AN=56;BaseQRankSum=-9.740;DP=550;FS=0.425;HRun=0;HaplotypeScore=227.3129;InbreedingCoeff=0.8254;MQ=61.79;MQ0=3;MQRankSum=-12.479;QD=42.29;ReadPosRankSum=1.293;VQSLOD=4.3228;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,8:13:15.05:518,15,0	0/0:1,0:12:30.10:0,30,770	0/0:18,0:15:18.06:0,18,586	0/0:15,0:11:9.03:0,9,418	0/0:8,0:27:63.22:0,63,1700	1/1:12,6:18:18.06:625,18,0	0/1:12,6:18:99:503,0,105	1/1:28,0:27:6:51,6,0	1/1:5,9:14:24.08:833,24,0	0/0:4,0:25:66.23:0,66,1762	0/0:6,0:18:39.13:0,39,1010	1/1:4,2:6:3.01:104,3,0	1/1:11,15:26:33.11:1146,33,0	1/1:11,12:23:36.12:1250,36,0	1/1:10,22:33:59.29:2161,59,0	1/1:6,17:23:45.15:1562,45,0	0/0:11,0:30:48.16:0,48,1228	1/1:5,2:7:6.02:197,6,0	1/1:10,7:16:18:459,18,0	1/1:11,13:24:36.09:1108,36,0	1/1:9,3:12:6.02:208,6,0	1/1:7,9:16:27.05:823,27,0	1/1:6,12:18:29.82:998,30,0	1/1:9,3:12:6.02:181,6,0	1/1:2,10:12:24.08:806,24,0	0/0:7,0:23:51.17:0,51,1345	0/0:5,0:34:78.74:0,79,2019	0/0:6,0:24:54.18:0,54,1385
chr10	16125198	.	TCTGCG	T	2746.30	PASS	AB=0.520;AC=26;AF=0.500;AN=52;BaseQRankSum=3.952;DP=560;FS=21.500;HRun=0;HaplotypeScore=206.6470;InbreedingCoeff=0.6795;MQ=65.64;MQ0=3;MQRankSum=-6.410;QD=8.30;ReadPosRankSum=-2.828;VQSLOD=0.6472;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:2,25:27:0.13:0,0,0	0/0:10,0:10:21.54:0,22,569	0/0:18,0:11:14.51:0,15,146	0/0:23,0:16:9.81:0,10,227	0/0:16,0:16:23.68:0,24,720	1/1:3,16:19:3.01:67,3,0	1/1:0,24:24:2.82:66,3,0	1/1:2,28:30:74.30:1060,74,0	1/1:3,19:22:5.86:133,6,0	0/0:27,0:27:69.54:0,70,1945	0/0:9,0:9:8.71:0,9,174	1/1:1,22:23:14.94:331,15,0	0/1:0,13:13:0:0,0,0	1/1:0,26:27:6.02:121,6,0	./.	0/1:4,20:24:0:0,0,0	0/0:27,0:27:51.17:0,51,1270	1/1:2,10:12:24.04:477,24,0	1/1:1,14:15:37.64:644,38,0	0/1:1,10:11:0:0,0,0	0/1:2,25:27:0:1,0,0	1/1:1,17:18:0.47:1,0,0	1/1:0,13:13:0.47:1,0,0	0/1:1,25:26:0.49:0,0,1	./.	0/0:30,0:29:87.29:0,87,2425	0/0:13,0:12:30.07:0,30,802	0/0:19,0:19:57.20:0,57,1723
chr10	16125199	.	C	CA	1184.07	PASS	AB=0.956;AC=25;AF=0.463;AN=54;BaseQRankSum=5.301;DP=558;FS=9.308;HRun=0;HaplotypeScore=199.9434;InbreedingCoeff=0.6448;MQ=65.44;MQ0=3;MQRankSum=-5.627;QD=3.53;ReadPosRankSum=-1.348;VQSLOD=1.7628;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:26,2:28:0:0,0,0	0/0:10,0:10:21.07:0,21,294	0/0:19,0:11:5.60:0,6,113	0/0:23,0:16:18.95:0,19,235	0/0:15,0:15:23.96:0,24,336	1/1:18,2:20:0.89:2,1,0	1/1:24,0:24:2.62:34,3,0	1/1:28,0:28:37:602,37,0	1/1:20,0:20:5.93:53,6,0	0/0:28,0:28:66.59:0,67,962	0/0:9,0:9:8.87:0,9,126	1/1:22,1:23:10.27:73,10,0	0/1:13,0:13:0:0,0,0	1/1:27,0:27:3.48:33,3,0	./.	0/1:21,4:25:0.09:0,0,0	0/0:27,0:27:51.17:0,51,713	1/1:12,2:14:22.90:205,23,0	1/1:14,0:14:27.48:331,27,0	0/0:10,0:10:0:0,0,0	0/1:26,0:26:0.42:0,0,0	1/1:18,0:18:0.47:1,0,0	0/1:13,0:13:0.01:0,0,0	0/1:25,0:25:0.33:0,0,0	0/1:15,2:17:0:0,0,0	0/0:30,0:29:87.28:0,87,1197	0/0:13,0:12:30.07:0,30,402	0/0:19,0:19:57.19:0,57,796
chr10	16125210	.	CAT	C	36.38	PASS	AB=0.983;AC=15;AF=0.313;AN=48;BaseQRankSum=3.568;DP=549;FS=2.260;HRun=0;HaplotypeScore=207.6611;InbreedingCoeff=0.1646;MQ=57.09;MQ0=5;MQRankSum=-4.243;QD=0.12;ReadPosRankSum=-0.239;VQSLOD=2.4081;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:31,0:31:0.02:0,0,0	0/0:9,0:9:18.02:0,18,290	0/0:16,0:7:5.51:0,6,51	0/0:21,0:13:2.72:0,3,8	0/0:17,0:17:24.08:0,24,385	0/0:19,2:21:2.47:0,2,14	1/1:25,0:24:2.57:19,3,0	0/1:26,0:26:21.74:22,0,393	1/1:18,0:18:1.92:16,2,0	0/0:26,0:25:62.73:0,63,1168	0/0:7,0:7:3.01:0,3,50	0/1:21,0:21:7.41:14,0,7	./.	0/1:26,0:26:21.90:22,0,25	./.	0/1:21,4:25:0.21:0,0,0	0/0:25,0:25:36.59:0,37,620	0/1:14,0:14:40.49:40,0,106	0/1:17,0:14:17.46:17,0,111	./.	0/1:30,0:30:0:0,0,1	0/1:19,0:19:0:0,0,0	./.	0/1:26,0:26:0.21:0,0,1	0/1:19,1:20:0.01:0,0,0	0/0:26,0:25:72.23:0,72,1282	0/0:11,0:10:24.08:0,24,446	0/0:19,0:19:57.19:0,57,998
chr10	16125220	.	C	CGT	1017.36	PASS	AB=0.995;AC=21;AF=0.420;AN=50;BaseQRankSum=-6.353;DP=518;FS=30.304;HRun=0;HaplotypeScore=217.3529;InbreedingCoeff=0.4163;MQ=49.99;MQ0=7;MQRankSum=4.340;QD=3.29;ReadPosRankSum=-1.575;VQSLOD=1.3406;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:26:0:0,0,0	1/1:6,0:6:2.04:6,2,0	1/1:13,0:4:0.30:1,0,0	0/1:18,0:11:0.01:0,0,2	1/1:13,3:16:8.50:55,8,0	0/0:22,0:21:2.90:0,3,31	0/1:26,0:24:0:0,0,1	0/0:25,0:23:47.15:0,47,473	0/0:22,0:22:5.67:0,6,35	1/1:22,0:21:2.21:320,2,0	./.	0/0:19,0:19:14.57:0,15,147	0/0:5,0:5:2.94:0,3,18	0/0:27,0:27:5.49:0,5,53	./.	0/1:20,0:20:0.04:0,0,0	0/1:20,1:21:0.09:57,0,0	0/0:13,0:13:28.67:0,29,254	0/0:19,0:15:28:0,28,249	./.	0/1:31,0:31:0:0,0,0	0/1:24,0:24:0.01:0,0,0	0/0:13,0:13:0:0,0,0	0/1:34,0:33:0.14:1,0,0	0/0:15,0:15:0:0,0,0	1/1:21,3:23:4.34:464,4,0	0/1:13,0:11:13.83:14,0,34	1/1:15,0:15:25.31:219,25,0
chr10	16125221	.	G	GCACACACA	557.45	PASS	AB=0.977;AC=24;AF=0.444;AN=54;BaseQRankSum=6.286;DP=506;FS=9.369;HRun=0;HaplotypeScore=235.2740;InbreedingCoeff=0.3237;MQ=47.66;MQ0=7;MQRankSum=-4.882;QD=1.54;ReadPosRankSum=-0.773;VQSLOD=1.4495;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:23,2:25:0:0,0,0	0/0:6,0:6:5.85:0,6,175	0/0:12,0:3:0:0,0,0	0/1:16,0:10:1.52:2,0,30	0/0:15,0:15:5.71:0,6,72	1/1:22,0:21:1.69:19,2,0	1/1:26,0:24:0.30:1,0,0	0/1:24,0:22:12.01:12,0,555	1/1:22,0:22:2.94:24,3,0	0/0:22,0:21:2.71:0,3,1004	0/1:6,0:6:0:0,0,0	1/1:17,0:18:11.86:147,12,0	0/0:5,0:5:2.90:0,3,17	0/1:27,0:27:3.21:3,0,43	./.	0/1:18,2:20:0.12:0,0,0	0/0:21,0:21:19.95:0,20,514	1/1:12,1:13:28.28:421,28,0	0/1:19,0:15:48.20:48,0,303	0/1:11,0:11:0:0,0,0	0/1:32,0:32:0.01:0,0,0	0/1:23,0:24:0.13:0,0,0	1/1:13,0:13:0.47:1,0,0	0/1:31,0:30:0.43:0,0,1	0/1:13,1:14:0.27:0,0,0	0/0:24,0:23:66.23:0,66,1628	0/0:13,0:11:21.07:0,21,572	0/0:15,0:15:45.10:0,45,995
chr10	16125223	.	G	GCA	87.30	PASS	AB=0.990;AC=19;AF=0.365;AN=52;BaseQRankSum=4.392;DP=462;FS=0.000;HRun=0;HaplotypeScore=192.5700;InbreedingCoeff=0.2148;MQ=47.12;MQ0=7;MQRankSum=-4.817;QD=0.30;ReadPosRankSum=-0.387;VQSLOD=2.6124;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:18,0:18:0:0,0,0	0/0:6,0:6:5.85:0,6,81	0/1:12,0:3:0:0,0,0	0/0:16,0:9:1.81:0,2,5	0/1:15,0:15:1.18:1,0,19	1/1:14,3:19:2.93:18,3,0	0/1:25,1:24:0.12:0,0,0	0/1:22,0:20:9.29:9,0,143	0/0:19,2:21:0.47:0,0,1	0/0:20,0:19:31.51:0,32,343	0/1:6,0:6:0:0,0,0	0/1:13,0:13:19.10:31,0,19	1/1:3,1:4:2.77:17,3,0	0/1:22,3:25:8.89:9,0,15	./.	0/1:17,0:17:0:0,0,0	0/0:22,0:22:17.53:0,18,223	0/1:9,0:9:0.61:88,0,1	0/1:18,0:14:20.34:20,0,104	0/1:9,0:9:0:0,0,0	0/1:29,0:29:0.16:0,0,0	0/1:23,0:23:0.01:0,0,0	./.	0/1:28,0:27:0.37:0,0,0	0/0:13,0:13:0:0,0,0	0/0:24,0:23:31.03:0,31,434	0/0:13,0:11:21.01:0,21,280	0/0:14,0:14:33.24:0,33,301
chr10	16125247	.	A	ACACACACACGCACG	3624.89	PASS	AB=0.937;AC=23;AF=0.411;AN=56;BaseQRankSum=-3.722;DP=550;FS=16.815;HRun=0;HaplotypeScore=260.6691;InbreedingCoeff=0.0563;MQ=35.73;MQ0=13;MQRankSum=-2.277;QD=10.63;ReadPosRankSum=1.492;VQSLOD=0.6117;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:2.55:0,3,47	1/1:1,4:8:0.47:1,0,0	0/0:15,0:2:2.93:0,3,41	0/0:28,0:8:20.78:0,21,279	0/1:8,0:18:0.27:0,0,0	0/1:21,0:20:18.87:51,0,19	0/1:22,0:20:20.08:20,0,80	0/1:27,0:24:56.79:57,0,319	0/0:16,0:16:2.36:0,2,50	1/1:2,10:19:46.32:1265,46,0	1/1:9,0:9:15.04:327,15,0	0/1:22,0:22:57.75:58,0,197	0/1:15,0:14:11.83:12,0,213	0/1:25,0:25:43.27:43,0,129	0/1:21,0:21:22.52:23,0,63	0/0:23,0:23:9.24:0,9,117	0/1:3,16:25:4.93:7,0,5	0/1:17,0:17:99:294,0,165	0/1:20,0:18:89.02:89,0,151	0/0:9,0:9:5.72:0,6,93	0/0:36,0:35:8.06:0,8,133	0/0:24,0:24:9.01:0,9,138	0/1:10,0:10:0:0,0,0	0/1:27,0:26:0.22:1,0,0	0/0:20,0:19:6.44:0,6,98	1/1:23,0:24:49.58:1081,50,0	0/0:6,0:13:7.65:0,8,46	1/1:10,0:10:23.98:296,24,0
chr10	16125249	.	ACG	A	1413.56	PASS	AB=0.962;AC=36;AF=0.643;AN=56;BaseQRankSum=0.187;DP=531;FS=19.342;HRun=0;HaplotypeScore=197.1747;InbreedingCoeff=0.3364;MQ=35.07;MQ0=14;MQRankSum=-1.263;QD=3.37;ReadPosRankSum=-1.986;VQSLOD=1.1962;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:22:2.99:24,3,0	0/0:5,0:5:2.74:0,3,12	0/0:16,0:2:5.59:0,6,26	0/0:29,0:9:5.46:0,5,86	0/0:17,1:18:7.99:0,8,35	0/1:21,0:20:0.07:1,0,0	1/1:22,0:20:8.76:56,9,0	1/1:26,0:23:18.16:121,18,0	1/1:16,0:16:2.99:25,3,0	0/1:13,0:13:13.83:14,0,126	0/0:9,0:9:14.95:0,15,141	0/1:22,0:22:12.79:91,0,13	1/1:15,0:14:17.12:120,17,0	0/1:26,0:26:1.34:114,0,1	1/1:20,0:20:8.46:57,8,0	1/1:20,0:20:8.42:56,8,0	0/0:19,0:19:5.49:0,5,40	1/1:17,0:17:9.71:172,10,0	1/1:20,0:18:15.82:121,16,0	1/1:9,0:9:3.46:24,3,0	1/1:34,1:34:8.88:68,9,0	1/1:24,0:24:11.98:99,12,0	1/1:10,0:10:2.99:24,3,0	1/1:26,1:26:2.61:24,3,0	1/1:20,0:19:5.99:51,6,0	0/1:21,4:25:99:225,0,218	0/0:14,1:13:9:0,9,80	0/1:9,1:10:40.38:95,0,40
chr10	16127105	.	GCT	G	9148.54	PASS	AB=1.000;AC=51;AF=0.911;AN=56;BaseQRankSum=-9.324;DP=643;FS=5.603;HRun=0;HaplotypeScore=133.4471;InbreedingCoeff=0.7163;MQ=64.52;MQ0=10;MQRankSum=-0.607;QD=15.40;ReadPosRankSum=5.887;VQSLOD=4.4081;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:26,1:26:45.34:397,45,0	1/1:9,1:10:20.42:134,20,0	0/0:20,0:11:28.99:0,29,258	0/0:29,0:21:24.76:0,25,310	1/1:22,2:24:44.76:396,45,0	1/1:11,0:11:22.78:204,23,0	1/1:41,1:40:81.74:675,82,0	1/1:11,5:15:35.31:302,35,0	1/1:32,1:32:52.77:535,53,0	1/1:23,1:24:62.06:555,62,0	1/1:10,1:11:14.52:122,15,0	1/1:23,1:24:22.92:273,23,0	1/1:18,0:18:8.95:249,9,0	1/1:26,0:26:51.78:434,52,0	1/1:22,0:22:25.14:274,25,0	0/1:14,0:14:1.54:115,0,2	1/1:32,1:33:62.21:527,62,0	1/1:30,1:31:10.85:406,11,0	1/1:17,0:16:36.03:373,36,0	1/1:11,0:11:17.80:146,18,0	1/1:72,0:71:22.01:1052,22,0	1/1:18,0:18:16.21:229,16,0	1/1:9,0:9:11.83:88,12,0	1/1:30,1:30:1.82:229,2,0	1/1:23,1:23:33.12:380,33,0	1/1:23,5:27:80.52:726,81,0	1/1:12,0:12:30.59:206,31,0	1/1:4,2:6:14.68:123,15,0
chr10	16127149	.	T	TGC	1634.57	PASS	AB=0.992;AC=34;AF=0.630;AN=54;BaseQRankSum=5.211;DP=653;FS=8.430;HRun=0;HaplotypeScore=123.2533;InbreedingCoeff=0.0191;MQ=52.81;MQ0=19;MQRankSum=-0.307;QD=2.78;ReadPosRankSum=2.781;VQSLOD=1.9614;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:35,0:32:4.22:128,0,4	1/1:7,0:7:2.99:24,3,0	0/0:4,0:1:2.98:0,3,22	0/0:10,0:4:5.39:0,5,27	1/1:17,0:17:3.43:11,3,0	1/1:16,1:17:5.42:60,5,0	0/1:39,1:38:50.99:51,0,140	0/1:25,0:22:18.61:174,0,19	1/1:26,1:26:10.81:90,11,0	0/1:24,0:23:10.49:148,0,10	1/1:12,0:12:1.82:5,2,0	0/1:31,0:29:0.79:58,0,1	0/1:27,0:27:21.48:21,0,65	0/1:25,1:26:14.22:45,0,14	0/0:25,0:25:7.33:0,7,57	0/1:25,0:25:1.08:1,0,43	1/1:23,0:23:12.15:92,12,0	0/1:35,0:35:5.10:5,0,100	1/1:12,0:11:16.67:134,17,0	1/1:13,0:12:14.80:100,15,0	0/1:71,3:73:99:144,0,121	0/0:6,9:15:4.91:0,5,32	./.	0/1:39,0:38:45.01:45,0,63	0/1:22,0:21:2.62:3,0,42	1/1:37,0:36:8.36:231,8,0	1/1:15,0:15:14.96:109,15,0	1/1:6,0:6:14.37:109,14,0
chr10	16127151	.	T	TGCGC	5918.05	PASS	AB=0.569;AC=51;AF=0.911;AN=56;BaseQRankSum=-0.859;DP=676;FS=12.358;HRun=0;HaplotypeScore=127.9388;InbreedingCoeff=0.4158;MQ=54.74;MQ0=17;MQRankSum=-0.435;QD=8.97;ReadPosRankSum=1.978;VQSLOD=3.1919;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:34,0:31:20.47:350,20,0	1/1:7,0:7:3.01:65,3,0	0/0:5,0:2:5.93:0,6,52	0/0:11,0:5:8.71:0,9,64	1/1:17,0:17:4.70:25,5,0	1/1:3,13:17:7.27:139,7,0	1/1:13,28:45:8.57:91,9,0	1/1:24,0:21:47.99:517,48,0	1/1:10,19:29:11.83:227,12,0	1/1:24,0:23:25.22:369,25,0	1/1:12,0:12:3.31:15,3,0	1/1:30,0:29:11.87:194,12,0	1/1:12,14:30:9.10:189,9,0	1/1:9,18:28:5.37:65,5,0	1/1:24,0:24:11.01:184,11,0	1/1:25,0:25:20.60:356,21,0	1/1:21,0:21:11.70:153,12,0	1/1:35,0:35:27.86:547,28,0	1/1:13,1:13:32.74:405,33,0	1/1:13,0:12:18.02:221,18,0	0/1:19,55:77:85.54:297,0,86	1/1:16,0:16:5.37:60,5,0	1/1:1,9:9:0.34:1,0,0	1/1:8,31:40:12.04:313,12,0	1/1:21,0:20:5.09:83,5,0	1/1:37,0:36:39.87:523,40,0	1/1:15,0:15:17.80:285,18,0	1/1:11,0:11:15.05:243,15,0
chr10	16127152	.	G	GCGCA	4560.24	PASS	AB=1.000;AC=38;AF=0.679;AN=56;BaseQRankSum=-0.850;DP=680;FS=4.157;HRun=0;HaplotypeScore=128.6428;InbreedingCoeff=0.0300;MQ=56.06;MQ0=16;MQRankSum=-0.881;QD=7.20;ReadPosRankSum=7.558;VQSLOD=3.1022;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:7,2:32:20.93:450,21,0	1/1:7,0:7:3.01:51,3,0	0/0:7,0:4:5.69:0,6,68	0/0:10,0:5:7.89:0,8,57	0/0:17,0:17:1.72:0,2,4	0/1:17,0:17:11.96:87,0,12	0/1:44,0:44:28.04:28,0,35	1/1:23,0:20:3.46:156,3,0	1/1:29,0:28:9.32:144,9,0	0/1:24,0:23:54.06:179,0,54	0/0:12,0:12:2.02:0,2,6	1/1:10,19:31:11.87:283,12,0	0/1:30,0:30:74.36:99,0,74	0/1:29,0:29:1.15:34,0,1	1/1:2,22:25:11.53:269,12,0	1/1:6,19:28:20.73:524,21,0	1/1:21,0:21:11.04:85,11,0	1/1:6,27:34:35.77:794,36,0	0/1:14,0:13:25.64:160,0,26	1/1:13,0:12:16.70:112,17,0	0/1:76,0:75:99:169,0,117	0/1:15,0:15:7.97:8,0,35	1/1:10,0:9:0.34:1,0,0	0/1:41,0:40:4.94:210,0,5	1/1:9,12:22:2.68:122,3,0	1/1:37,0:36:5.31:264,5,0	0/1:15,0:15:4.62:183,0,5	1/1:11,0:11:8.74:148,9,0
chr10	16127155	.	C	CCGCGT	1301.96	PASS	AB=0.896;AC=18;AF=0.321;AN=56;BaseQRankSum=0.295;DP=711;FS=8.810;HRun=0;HaplotypeScore=169.3745;InbreedingCoeff=0.0211;MQ=61.22;MQ0=15;MQRankSum=-4.096;QD=3.20;ReadPosRankSum=3.087;VQSLOD=1.8137;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:31:10.27:0,10,90	1/1:2,0:7:0.93:40,1,0	0/0:12,0:9:12.01:0,12,155	0/1:15,0:9:0.50:0,0,132	0/0:10,3:26:3.74:0,4,10	0/1:17,0:17:6.56:7,0,22	0/0:42,0:42:16.33:0,16,145	0/0:24,0:21:52.43:0,52,397	0/1:34,0:33:20.86:21,0,94	0/1:12,1:33:74.54:342,0,75	0/0:5,0:16:2.03:0,2,7	0/0:32,0:30:0.33:0,0,44	0/1:30,0:30:4.44:4,0,238	0/0:30,0:30:10.56:0,11,61	0/0:22,0:22:8.20:0,8,61	0/0:25,0:25:11.84:0,12,70	1/1:8,0:28:9.81:147,10,0	0/1:31,0:31:3.72:4,0,26	0/0:15,0:14:11.10:0,11,238	0/0:12,0:11:17.61:0,18,127	0/1:77,0:76:8.41:8,0,223	0/0:15,0:15:10.99:0,11,92	0/1:9,0:9:0:0,0,0	0/1:39,0:38:43.07:59,0,43	0/1:18,0:17:2.95:3,0,34	0/1:14,2:41:67.04:413,0,67	0/1:3,0:17:46.84:155,0,47	1/1:6,0:9:20.98:247,21,0
chr10	16127499	.	AT	A	1045.55	PASS	AB=0.828;AC=12;AF=0.214;AN=56;BaseQRankSum=-2.635;DP=467;FS=0.577;HRun=9;HaplotypeScore=102.0265;InbreedingCoeff=0.7169;MQ=63.55;MQ0=1;MQRankSum=-2.234;QD=9.96;ReadPosRankSum=1.426;VQSLOD=2.5466;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:10,11:21:37.74:211,0,38	0/0:7,0:7:18.05:0,18,208	0/1:16,0:11:0.64:1,0,120	0/0:18,0:9:15.04:0,15,170	0/0:31,0:31:81.23:0,81,922	0/0:12,0:13:21.50:0,22,176	0/0:22,1:23:5.63:0,6,318	0/0:23,0:23:48.12:0,48,534	0/0:15,0:15:12.04:0,12,138	0/0:22,1:24:38.57:0,39,679	0/0:19,0:19:51.15:0,51,588	1/1:3,8:11:9.86:154,10,0	0/0:19,0:19:14.83:0,15,140	0/0:6,0:6:3.01:0,3,34	1/1:5,1:6:5.98:55,6,0	1/1:6,7:13:20.65:191,21,0	0/0:26,0:26:72.21:0,72,829	1/1:8,13:21:27.31:270,27,0	0/0:18,0:18:39.09:0,39,418	0/0:14,0:14:18:0,18,179	0/0:5,0:5:9.03:0,9,104	0/0:15,0:15:32.76:0,33,349	0/0:13,0:12:26.91:0,27,291	0/0:10,0:9:18.01:0,18,193	1/1:6,11:17:27.85:331,28,0	0/0:20,0:19:42.12:0,42,484	0/0:26,0:25:54.03:0,54,571	0/0:17,0:17:51.15:0,51,588
chr10	16127515	.	C	CTTTTT	700.84	PASS	AB=0.974;AC=15;AF=0.268;AN=56;BaseQRankSum=2.457;DP=484;FS=12.762;HRun=6;HaplotypeScore=122.5869;InbreedingCoeff=-0.0543;MQ=50.07;MQ0=7;MQRankSum=-4.990;QD=3.34;ReadPosRankSum=-2.435;VQSLOD=-0.6273;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:22:69.87:70,0,295	0/0:7,0:7:17.99:0,18,279	0/0:14,0:6:14.03:0,14,95	0/0:14,0:5:11:0,11,91	0/0:28,0:28:75.21:0,75,1056	0/1:12,0:12:31.32:67,0,31	0/1:18,0:18:3.82:212,0,4	0/0:21,0:20:28.83:0,29,180	1/1:14,0:14:2.22:7,2,0	0/0:25,0:25:63.84:0,64,871	0/0:22,0:21:52.63:0,53,725	0/0:10,0:9:10.08:0,10,132	0/1:23,0:22:12.08:78,0,12	1/1:13,0:13:5.71:50,6,0	0/1:6,4:10:46.07:46,0,111	0/1:16,0:16:46.89:47,0,302	0/0:31,0:31:64.07:0,64,1072	0/1:19,0:19:9.80:10,0,240	0/1:15,0:14:14.13:14,0,164	0/1:14,0:14:47.67:151,0,48	0/0:7,0:5:1.56:0,2,16	0/1:16,0:16:82.16:98,0,82	0/1:17,0:16:2.22:2,0,119	0/0:12,0:11:11.93:0,12,87	0/0:17,0:17:6.05:0,6,323	0/0:21,0:19:39.09:0,39,535	0/0:26,0:25:59.97:0,60,875	0/0:18,0:18:42.11:0,42,621
chr10	16127522	.	CTTTTT	C	4560.81	PASS	AB=1.000;AC=18;AF=0.321;AN=56;BaseQRankSum=-4.229;DP=500;FS=11.546;HRun=14;HaplotypeScore=105.9617;InbreedingCoeff=0.7608;MQ=49.91;MQ0=9;MQRankSum=4.103;QD=22.25;ReadPosRankSum=6.796;VQSLOD=1.7737;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:23:41.61:0,42,765	1/1:2,6:8:11.70:198,12,0	0/0:15,0:6:8.86:0,9,127	0/0:16,0:6:6.49:0,6,126	1/1:7,20:27:29.69:497,30,0	0/0:4,0:12:18.06:0,18,419	0/0:3,0:16:18.06:0,18,400	0/0:2,0:23:34.22:0,34,503	0/0:14,0:14:6.45:0,6,87	1/1:9,17:26:51.01:733,51,0	1/1:4,16:19:38.99:635,39,0	0/0:7,0:6:9.03:0,9,221	0/0:3,0:24:13.29:0,13,286	0/0:3,0:15:5.97:0,6,90	0/0:12,0:12:26.90:0,27,458	0/0:18,0:19:48.93:0,49,914	1/1:3,29:32:54.09:889,54,0	0/0:17,0:18:28.24:0,28,531	0/0:9,0:18:11.12:0,11,369	0/0:3,0:16:26.96:0,27,415	0/0:6,0:4:5.77:0,6,33	0/1:5,0:18:4.31:4,0,287	0/0:18,0:17:24.78:0,25,532	0/1:12,0:11:24.92:25,0,156	0/0:16,0:17:45.09:0,45,906	1/1:6,14:18:39.03:604,39,0	1/1:4,24:27:28.35:726,28,0	1/1:9,5:14:14.91:248,15,0
chr10	16127526	.	T	TTC	849.39	PASS	AB=0.955;AC=13;AF=0.232;AN=56;BaseQRankSum=0.208;DP=466;FS=2.479;HRun=0;HaplotypeScore=95.2844;InbreedingCoeff=-0.0817;MQ=48.99;MQ0=11;MQRankSum=-2.251;QD=4.69;ReadPosRankSum=-1.363;VQSLOD=2.6967;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:8.80:0,9,240	0/0:8,0:8:14.99:0,15,129	0/0:16,0:6:11.95:0,12,111	0/0:14,0:5:5.72:0,6,55	0/0:26,0:26:71.60:0,72,551	0/1:13,0:13:30.54:31,0,67	0/1:14,0:14:12.97:101,0,13	1/1:20,0:19:25.56:309,26,0	0/1:4,11:14:32.19:37,0,32	0/0:20,0:20:44.65:0,45,368	0/0:19,0:18:34.94:0,35,352	0/0:6,0:5:8.91:0,9,61	0/1:24,0:23:22.42:35,0,22	0/1:16,0:15:10.56:11,0,59	0/0:12,0:12:20.86:0,21,152	0/0:20,0:20:50.53:0,51,350	0/0:32,0:31:53.67:0,54,496	0/0:14,0:14:27.71:0,28,183	0/1:14,0:13:67.88:68,0,82	0/1:15,0:15:65.09:81,0,65	0/1:6,0:4:11.05:28,0,11	0/1:14,0:14:22.06:67,0,22	0/1:18,0:17:8.37:113,0,8	0/1:11,1:11:35.13:127,0,35	0/0:16,0:16:35.15:0,35,240	0/0:19,0:17:24.22:0,24,257	0/0:27,0:26:56.55:0,57,454	0/0:14,0:14:29.90:0,30,238
chr10	16131868	.	T	TAC	1420.80	PASS	AB=0.909;AC=35;AF=0.700;AN=50;BaseQRankSum=1.066;DP=677;FS=31.400;HRun=0;HaplotypeScore=106.8835;InbreedingCoeff=0.2727;MQ=57.15;MQ0=23;MQRankSum=1.361;QD=3.05;ReadPosRankSum=-0.083;VQSLOD=0.4070;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:29:25.81:26,0,71	1/1:6,0:6:2.99:24,3,0	./.	./.	1/1:10,5:12:3.01:34,3,0	1/1:11,8:19:3.01:45,3,0	1/1:30,10:39:12.04:179,12,0	1/1:22,0:21:6.38:39,6,0	0/0:14,15:30:2.55:0,3,22	1/1:25,0:20:21.51:183,22,0	1/1:9,0:9:2.22:7,2,0	0/0:28,0:27:11.83:0,12,112	1/1:11,9:23:9.50:135,9,0	0/1:33,0:31:26.55:39,0,27	0/0:28,0:27:18.03:0,18,188	0/0:34,0:37:26.68:0,27,241	1/1:11,1:24:6.01:69,6,0	0/1:28,0:30:14.38:14,0,106	1/1:6,1:6:3.01:45,3,0	1/1:10,4:15:10.59:137,11,0	1/1:43,12:55:14.85:223,15,0	./.	0/1:14,5:18:26.72:39,0,27	0/1:25,9:36:20.70:104,0,21	0/0:17,0:17:9.02:0,9,99	1/1:15,7:19:15.62:123,16,0	1/1:19,0:22:2.67:24,3,0	1/1:8,0:6:11.49:92,11,0
chr10	16132957	.	TACACACACACACACACACACACACACACACACAC	T	2267.47	PASS	AB=0.800;AC=15;AF=0.268;AN=56;BaseQRankSum=6.021;DP=555;FS=3.516;HRun=0;HaplotypeScore=392.5952;InbreedingCoeff=0.7474;MQ=64.10;MQ0=16;MQRankSum=-2.994;QD=16.43;ReadPosRankSum=-1.487;VQSLOD=0.8979;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:35:32.70:0,33,2235	1/1:10,0:10:5.69:109,6,0	0/0:33,0:18:3.01:0,3,117	0/0:28,0:20:24.54:0,25,520	0/1:12,4:16:0:0,0,0	0/0:13,0:13:12.04:0,12,862	0/0:28,0:28:36.12:0,36,2118	0/0:20,0:23:28.81:0,29,2055	0/0:10,0:10:9.03:0,9,609	1/1:15,12:27:20.67:738,21,0	1/1:15,0:14:2.36:24,2,0	0/0:16,0:16:24.08:0,24,2036	0/0:9,0:10:15.05:0,15,649	0/0:17,0:21:27.09:0,27,1495	0/0:27,0:27:39.13:0,39,3881	0/0:28,0:28:39.13:0,39,3139	1/1:13,5:14:2.98:259,3,0	0/0:16,0:15:36.12:0,36,2597	0/0:15,0:16:21.07:0,21,1100	0/0:11,0:12:12.04:0,12,613	0/0:26,0:25:8.40:0,8,433	0/0:12,0:13:15.05:0,15,898	0/0:7,0:8:9.03:0,9,755	0/0:20,0:23:15.52:0,16,1000	0/0:27,0:27:26.76:0,27,2609	1/1:15,10:25:23.90:672,24,0	1/1:10,8:17:6.02:517,6,0	1/1:7,1:8:3.01:111,3,0
chr10	16133014	.	GGAGAGAGAGAGA	G	1734.41	PASS	AB=0.773;AC=17;AF=0.327;AN=52;BaseQRankSum=0.016;DP=509;FS=34.742;HRun=0;HaplotypeScore=182.1247;InbreedingCoeff=0.5592;MQ=35.55;MQ0=47;MQRankSum=-4.725;QD=8.76;ReadPosRankSum=0.792;VQSLOD=1.4651;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:26:1.41:0,1,2	0/0:9,0:9:10.79:0,11,258	./.	./.	0/0:13,0:11:3.01:0,3,128	0/1:10,4:13:12.46:97,0,12	1/1:21,6:22:3.64:36,4,0	1/1:22,0:19:2.98:22,3,0	1/1:10,8:22:24.04:689,24,0	0/0:20,0:19:29.75:0,30,1103	0/0:6,0:4:6.02:0,6,294	0/0:15,0:14:8.62:0,9,127	1/1:11,10:20:18.02:461,18,0	1/1:20,3:21:8.56:60,9,0	0/0:21,0:31:17.89:0,18,269	0/1:14,0:19:0.17:0,0,46	0/0:22,0:16:24.55:0,25,1007	0/0:12,0:17:7.73:0,8,44	1/1:7,6:13:17.59:492,18,0	1/1:11,7:18:5.18:33,5,0	0/0:29,0:24:0.63:0,1,1	0/1:9,1:10:0:0,0,0	0/0:11,3:13:1.41:0,1,2	0/0:18,6:22:0.54:0,1,1	0/0:15,0:16:0.87:0,1,24	0/0:28,0:25:51.18:0,51,2012	0/0:21,0:20:27.09:0,27,947	0/0:11,0:7:15.05:0,15,518
chr10	16136331	.	CGT	C	2300.44	PASS	AB=0.881;AC=39;AF=0.750;AN=52;BaseQRankSum=5.404;DP=597;FS=2.610;HRun=0;HaplotypeScore=77.1123;InbreedingCoeff=0.3572;MQ=67.64;MQ0=5;MQRankSum=-0.758;QD=4.69;ReadPosRankSum=3.510;VQSLOD=2.3500;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:27,11:40:17.87:197,18,0	0/0:8,0:8:6.02:0,6,80	./.	./.	0/0:11,0:11:15.03:0,15,200	1/1:10,8:19:12.03:131,12,0	1/1:17,13:32:16.87:158,17,0	1/1:17,0:20:1.57:12,2,0	1/1:14,0:15:12.34:113,12,0	0/1:22,1:21:14.79:15,0,205	0/1:11,3:13:17.98:18,0,106	1/1:11,8:19:9.02:99,9,0	1/1:11,5:16:12.03:132,12,0	0/1:17,8:28:24.49:120,0,24	1/1:9,9:23:26.40:220,26,0	1/1:14,2:17:14.56:145,15,0	0/1:17,1:19:76.48:76,0,122	1/1:16,7:25:20.31:192,20,0	1/1:26,0:26:6.01:66,6,0	1/1:9,0:13:8.65:48,9,0	1/1:22,19:42:20.89:211,21,0	1/1:17,1:20:5.98:54,6,0	1/1:10,5:13:9.02:99,9,0	1/1:13,5:24:23.73:225,24,0	1/1:16,1:21:17.50:128,18,0	0/0:25,0:25:21.06:0,21,284	0/0:16,0:16:8.70:0,9,100	0/1:19,0:19:10.76:11,0,77
chr10	16137191	.	T	TACAC	4291.67	PASS	AB=0.846;AC=35;AF=0.648;AN=54;BaseQRankSum=-1.075;DP=618;FS=39.253;HRun=0;HaplotypeScore=154.8461;InbreedingCoeff=0.5222;MQ=61.10;MQ0=14;MQRankSum=1.992;QD=10.24;ReadPosRankSum=-3.711;VQSLOD=2.0277;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:24.15:0,24,250	1/1:10,0:10:5.68:92,6,0	./.	0/0:33,0:19:3.01:0,3,40	1/1:19,0:18:2.92:44,3,0	1/1:7,7:16:11.39:225,11,0	0/1:17,8:34:29.65:202,0,30	1/1:25,0:25:6.46:60,6,0	0/1:10,1:14:38.24:74,0,38	1/1:28,0:28:24.06:346,24,0	0/1:23,0:21:0:0,0,0	0/0:20,0:19:17.78:0,18,201	0/1:15,2:17:35.16:160,0,35	1/1:18,1:19:20.64:242,21,0	0/0:19,0:19:14.89:0,15,152	0/0:24,0:24:27.03:0,27,333	1/1:19,0:19:13.37:144,13,0	0/0:24,0:24:30.53:0,31,425	1/1:16,1:17:6.02:127,6,0	1/1:28,0:27:14.67:255,15,0	1/1:41,3:45:44.44:597,44,0	0/1:15,1:16:11.93:145,0,12	1/1:12,1:13:14.95:206,15,0	1/1:19,13:35:29.53:623,30,0	0/0:12,0:12:12.03:0,12,148	1/1:22,0:21:29.92:414,30,0	1/1:12,0:12:15.03:211,15,0	1/1:4,0:4:9.03:123,9,0
chr10	16137479	.	ATG	A	5302.05	PASS	AB=0.561;AC=50;AF=0.893;AN=56;BaseQRankSum=-0.082;DP=383;FS=25.331;HRun=0;HaplotypeScore=109.0399;InbreedingCoeff=0.3921;MQ=44.27;MQ0=14;MQRankSum=0.854;QD=15.55;ReadPosRankSum=3.129;VQSLOD=2.6202;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,9:9:9.03:110,9,0	1/1:2,5:6:12.04:147,12,0	0/0:17,0:4:6.32:0,6,63	0/0:24,0:7:12.01:0,12,146	0/1:5,14:19:33.13:133,0,33	1/1:2,10:11:15.05:183,15,0	1/1:0,6:6:6.02:73,6,0	1/1:15,2:15:26.95:249,27,0	1/1:1,9:9:15.05:183,15,0	1/1:10,13:23:41.95:479,42,0	1/1:2,7:10:20.90:234,21,0	1/1:6,4:9:21.04:232,21,0	1/1:1,9:9:6.02:73,6,0	1/1:2,7:10:18.06:220,18,0	1/1:2,13:14:6.02:73,6,0	1/1:2,13:15:26.92:307,27,0	1/1:5,2:6:8.86:87,9,0	1/1:2,8:10:12.04:145,12,0	1/1:0,7:7:17.92:165,18,0	1/1:4,20:24:29.92:343,30,0	0/1:1,4:6:39.80:42,0,40	1/1:11,8:19:32.91:357,33,0	1/1:5,9:15:18.77:199,19,0	1/1:2,5:5:3.01:37,3,0	1/1:1,13:14:21.07:256,21,0	1/1:5,21:25:48.10:538,48,0	1/1:2,20:21:30.09:366,30,0	1/1:1,6:7:4.79:71,5,0
chr10	16137569	.	T	TACACACACACAC	6805.14	PASS	AB=0.882;AC=48;AF=0.889;AN=54;BaseQRankSum=-0.810;DP=537;FS=10.772;HRun=0;HaplotypeScore=189.1311;InbreedingCoeff=0.3235;MQ=43.81;MQ0=5;MQRankSum=1.399;QD=13.75;ReadPosRankSum=1.743;VQSLOD=3.2398;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:15,3:18:8.80:65,9,0	1/1:5,0:5:2.99:24,3,0	0/1:21,0:5:11.88:12,0,15	0/0:33,0:8:5.19:0,5,96	1/1:18,1:19:6.46:50,6,0	./.	1/1:18,0:18:15.15:307,15,0	1/1:36,0:33:68.68:783,69,0	1/1:16,0:16:3.01:48,3,0	1/1:21,0:19:44.77:533,45,0	0/1:2,12:17:0:0,0,0	1/1:19,3:21:19.41:373,19,0	1/1:20,0:20:5.94:42,6,0	1/1:15,0:15:17.94:234,18,0	1/1:22,2:23:18.35:169,18,0	1/1:19,0:19:14.97:236,15,0	1/1:1,8:12:8.57:473,9,0	1/1:12,0:12:17.83:257,18,0	1/1:17,0:16:21.77:715,22,0	0/1:21,0:21:1.02:19,0,1	0/1:16,0:16:0:0,0,0	1/1:22,0:21:11.96:95,12,0	1/1:13,0:13:5.81:171,6,0	1/1:13,0:13:9:95,9,0	1/1:22,2:22:18.22:409,18,0	1/1:25,0:23:44.62:583,45,0	1/1:31,1:31:42.08:665,42,0	1/1:10,1:13:13.98:448,14,0
chr10	16137595	.	C	CACACACACACACAT	8909.57	PASS	AB=0.932;AC=34;AF=0.654;AN=52;BaseQRankSum=3.633;DP=575;FS=17.941;HRun=0;HaplotypeScore=220.7572;InbreedingCoeff=-0.1070;MQ=54.33;MQ0=6;MQRankSum=-3.079;QD=18.41;ReadPosRankSum=4.339;VQSLOD=2.4502;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:27:23.40:23,0,120	0/1:5,0:5:14.93:106,0,15	0/0:30,0:21:50.16:0,50,682	0/0:31,0:14:39.29:0,39,548	0/1:23,0:23:65.87:66,0,75	1/1:5,0:5:6:235,6,0	1/1:19,0:19:26.94:486,27,0	1/1:40,0:37:99:1332,99,0	1/1:21,0:21:33.04:605,33,0	0/1:28,0:26:99:779,0,117	./.	0/1:19,0:18:4.93:254,0,5	./.	1/1:13,1:13:14.86:292,15,0	0/1:23,0:22:66.75:139,0,67	0/1:19,0:18:34.36:154,0,34	0/1:13,0:13:70.80:249,0,71	0/1:11,0:11:25.86:660,0,26	1/1:14,0:15:45.04:1006,45,0	0/1:3,16:31:0.04:0,0,0	0/1:2,8:21:0:0,0,0	1/1:20,1:21:9:120,9,0	1/1:1,8:21:3.01:211,3,0	1/1:19,0:19:29.96:286,30,0	0/1:25,0:23:27.49:237,0,27	0/1:30,0:28:86.11:768,0,86	1/1:23,0:22:8.11:598,8,0	0/1:10,0:10:35.66:304,0,36
chr10	16138312	.	ATCT	A	6079.22	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-10.854;DP=569;FS=10.785;HRun=0;HaplotypeScore=115.0539;InbreedingCoeff=0.9986;MQ=69.91;MQ0=0;MQRankSum=-2.479;QD=36.19;ReadPosRankSum=2.253;VQSLOD=5.5958;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:59.53:0,60,868	1/1:1,8:9:27.05:390,27,0	0/0:18,0:14:25.36:0,25,398	0/0:15,0:13:21.06:0,21,314	1/1:1,16:17:50.97:661,51,0	0/0:16,0:16:45.14:0,45,668	0/0:16,0:16:42.12:0,42,627	0/0:27,0:27:69.21:0,69,986	0/0:14,0:15:35.98:0,36,509	1/1:0,14:14:42.13:657,42,0	1/1:1,15:16:44.90:668,45,0	0/0:16,0:16:29.82:0,30,432	0/0:15,0:15:39.11:0,39,559	0/0:17,0:17:48.15:0,48,703	0/0:21,0:21:54.15:0,54,833	0/0:24,0:24:57.18:0,57,851	1/1:6,36:42:78.13:1236,78,0	0/0:20,0:20:51.17:0,51,784	0/0:27,0:27:75.21:0,75,1113	0/0:32,0:32:84.22:0,84,1272	0/0:15,0:15:30.06:0,30,413	0/0:15,0:15:42.11:0,42,610	0/0:23,0:23:60.20:0,60,896	0/0:20,0:20:42.09:0,42,579	0/0:25,0:25:63.18:0,63,943	1/1:1,20:21:57.08:758,57,0	1/1:4,30:34:74.85:1221,75,0	1/1:2,13:15:30.10:488,30,0
chr10	16138317	.	C	CT	7467.62	PASS	AB=0.781;AC=36;AF=0.643;AN=56;BaseQRankSum=-15.605;DP=571;FS=10.336;HRun=11;HaplotypeScore=92.4460;InbreedingCoeff=0.8045;MQ=70.33;MQ0=0;MQRankSum=4.382;QD=19.20;ReadPosRankSum=-0.012;VQSLOD=4.8860;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,22:27:27.86:464,28,0	0/0:9,0:9:19.41:0,19,66	0/0:16,0:13:9.74:0,10,46	0/1:14,0:12:9.49:9,0,38	0/0:19,0:19:26.58:0,27,118	1/1:1,15:16:42.08:426,42,0	0/1:3,13:18:11.82:250,0,12	1/1:6,21:27:63.52:610,64,0	1/1:3,12:15:33.04:326,33,0	0/0:15,0:15:33.20:0,33,117	0/0:16,0:16:33.87:0,34,119	1/1:3,14:17:23.88:243,24,0	1/1:2,13:15:33.05:328,33,0	1/1:3,12:16:41.92:410,42,0	1/1:4,16:20:44.82:416,45,0	1/1:1,24:25:54.11:548,54,0	0/0:39,0:39:62.57:0,63,219	1/1:3,19:22:27.97:464,28,0	1/1:8,18:27:10.46:448,10,0	1/1:6,24:31:43.57:591,44,0	1/1:7,8:15:0.80:185,1,0	1/1:4,12:16:32.98:319,33,0	1/1:3,20:23:57.11:577,57,0	1/1:4,16:20:30.06:305,30,0	1/1:4,21:25:54.11:548,54,0	0/0:23,0:23:13.90:0,14,110	0/0:31,0:31:62.30:0,62,225	0/0:13,0:13:24.04:0,24,82
chr10	16138977	.	T	TTA	9885.96	PASS	AC=34;AF=0.630;AN=54;BaseQRankSum=-12.655;DP=335;FS=7.445;HRun=0;HaplotypeScore=36.8149;InbreedingCoeff=0.9055;MQ=76.63;MQ0=0;MQRankSum=-0.016;QD=46.20;ReadPosRankSum=0.490;VQSLOD=5.6861;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,26:27:66.23:1204,66,0	0/0:3,0:3:9.03:0,9,129	0/0:8,0:8:8.91:0,9,188	0/0:7,0:7:12.03:0,12,155	0/0:16,0:16:42.14:0,42,602	1/1:0,22:22:57.20:1045,57,0	1/1:2,2:4:6.02:110,6,0	1/1:3,31:36:99:1705,99,0	1/1:0,4:4:6.02:110,6,0	0/0:14,0:14:42.13:0,42,586	0/0:11,0:11:33.10:0,33,455	1/1:0,7:7:18.06:330,18,0	1/1:1,7:8:24.08:434,24,0	1/1:0,5:5:15.05:275,15,0	1/1:2,13:15:39.13:714,39,0	1/1:1,6:7:15.05:275,15,0	0/0:22,0:22:66.18:0,66,890	1/1:2,24:27:69.24:1264,69,0	1/1:1,10:11:30.10:550,30,0	1/1:1,15:16:39.13:715,39,0	1/1:0,3:3:9.03:165,9,0	1/1:0,5:5:9.03:165,9,0	1/1:1,3:4:6.02:110,6,0	./.	1/1:0,13:13:39.13:715,39,0	0/0:16,0:16:39.13:0,39,558	0/0:17,0:16:48.16:0,48,684	0/0:6,0:6:18.06:0,18,258
chr10	16141026	.	G	GC	2102.65	PASS	AB=0.856;AC=26;AF=0.464;AN=56;BaseQRankSum=-6.649;DP=550;FS=6.346;HRun=10;HaplotypeScore=109.2830;InbreedingCoeff=0.3135;MQ=78.50;MQ0=8;MQRankSum=-0.934;QD=6.78;ReadPosRankSum=-0.897;VQSLOD=1.7881;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:31,0:30:23.94:24,0,31	0/0:11,0:11:14.61:0,15,93	0/0:59,1:28:6.41:0,6,130	0/1:55,1:31:5.40:5,0,56	0/0:14,0:14:26.91:0,27,169	1/1:6,13:19:24.06:255,24,0	0/1:10,10:20:9.47:224,0,9	1/1:7,9:16:1.43:149,1,0	1/1:4,10:14:2.41:215,2,0	0/0:12,0:12:24.78:0,25,120	0/0:10,0:10:25.81:0,26,138	0/1:21,0:21:13.44:75,0,13	1/1:5,3:8:6.02:64,6,0	1/1:3,9:12:17.89:181,18,0	0/0:22,0:22:0.80:0,1,66	0/0:16,0:16:13.72:0,14,51	0/0:32,0:32:59.87:0,60,296	0/1:21,0:21:45.98:46,0,50	0/1:4,4:9:49.57:104,0,50	1/1:8,2:10:17.95:158,18,0	1/1:6,9:14:7.54:94,8,0	0/1:2,6:8:9.71:90,0,10	1/1:2,8:10:9:81,9,0	1/1:4,18:23:45.11:480,45,0	0/1:16,0:16:25.03:44,0,25	0/0:28,0:28:67.70:0,68,357	0/0:19,0:19:37.95:0,38,224	0/0:15,0:15:25.53:0,26,125
chr10	16141036	.	CA	C	2755.51	PASS	AB=0.959;AC=23;AF=0.411;AN=56;BaseQRankSum=-7.911;DP=593;FS=2.838;HRun=9;HaplotypeScore=105.8800;InbreedingCoeff=0.4977;MQ=73.43;MQ0=11;MQRankSum=2.394;QD=9.47;ReadPosRankSum=1.257;VQSLOD=2.5402;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:35,1:35:68.86:134,0,69	1/1:4,3:7:5.99:55,6,0	0/0:67,0:26:14.92:0,15,276	0/0:69,0:32:14.08:0,14,223	1/1:1,14:15:35.85:303,36,0	0/0:20,0:20:41.87:0,42,329	0/0:17,0:17:38.89:0,39,318	0/0:21,0:21:50.30:0,50,427	0/0:13,0:14:32.76:0,33,257	1/1:2,10:12:32.84:268,33,0	1/1:1,11:12:20.99:192,21,0	0/1:20,1:21:30.36:70,0,30	0/0:7,0:7:17.93:0,18,139	0/0:10,0:10:17.92:0,18,141	0/1:22,3:25:48.63:49,0,101	0/1:19,0:19:64.65:76,0,65	1/1:4,26:31:50.86:504,51,0	0/1:24,0:24:6.15:6,0,94	0/0:13,0:13:31.58:0,32,254	0/0:11,0:11:21.48:0,21,156	0/0:13,0:12:20.18:0,20,153	0/1:10,0:10:1.36:1,0,136	0/0:13,0:13:14.97:0,15,123	0/0:27,0:27:68.75:0,69,537	0/1:15,2:17:38.06:72,0,38	1/1:4,29:33:65.75:676,66,0	1/1:9,10:19:31.95:304,32,0	1/1:0,10:10:27.01:247,27,0
chr10	16141516	.	TTC	T	10720.36	PASS	AB=1.000;AC=53;AF=0.981;AN=54;BaseQRankSum=1.830;DP=299;FS=6.051;HRun=0;HaplotypeScore=198.5753;InbreedingCoeff=-0.0035;MQ=32.46;MQ0=0;MQRankSum=-0.964;QD=35.97;ReadPosRankSum=5.273;VQSLOD=5.5665;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:25:60.46:867,60,0	1/1:3,0:3:9.03:127,9,0	1/1:1,0:1:2.92:17,3,0	./.	0/1:10,0:10:1.92:87,0,2	1/1:8,0:8:24.04:342,24,0	1/1:18,1:19:54:697,54,0	1/1:17,0:17:47.82:599,48,0	1/1:6,0:6:17.92:217,18,0	1/1:13,0:13:36.12:523,36,0	1/1:10,1:11:27.04:386,27,0	1/1:10,0:10:27.08:367,27,0	1/1:12,0:12:36.09:499,36,0	1/1:15,0:15:45.15:668,45,0	1/1:13,0:13:38.92:525,39,0	1/1:10,1:11:33.11:503,33,0	1/1:6,0:6:12.04:162,12,0	1/1:5,0:5:12:154,12,0	1/1:5,1:6:14.50:180,15,0	1/1:9,1:10:22.84:365,23,0	1/1:14,0:14:19.30:312,19,0	1/1:19,0:19:48.01:674,48,0	1/1:15,0:15:37.89:555,38,0	1/1:9,0:9:17.19:209,17,0	1/1:17,0:17:51.02:676,51,0	1/1:7,0:7:21.07:318,21,0	1/1:8,2:10:30.01:420,30,0	1/1:6,0:6:18.06:271,18,0
chr10	16141517	.	TC	T	5826.61	PASS	AC=54;AF=1.000;AN=54;BaseQRankSum=2.157;DP=300;FS=3.269;HRun=4;HaplotypeScore=213.5045;InbreedingCoeff=0.0153;MQ=32.45;MQ0=0;MQRankSum=2.053;QD=19.49;ReadPosRankSum=1.713;VQSLOD=3.1472;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,25:25:65.53:535,66,0	1/1:0,3:3:8.99:81,9,0	1/1:1,0:1:2.92:17,3,0	./.	1/1:1,9:10:23.38:139,23,0	1/1:1,7:8:23.64:169,24,0	1/1:3,16:19:47.81:401,48,0	1/1:5,12:17:35.98:313,36,0	1/1:2,4:6:11.94:91,12,0	1/1:1,12:13:35.89:305,36,0	1/1:1,10:11:26.51:193,27,0	1/1:2,8:10:25.60:181,26,0	1/1:1,11:12:31.74:233,32,0	1/1:0,15:15:44.62:335,45,0	1/1:1,12:13:35.92:308,36,0	1/1:1,10:11:32.56:246,33,0	1/1:0,6:6:11.99:114,12,0	1/1:1,4:5:11.94:93,12,0	1/1:4,3:7:14.55:92,15,0	1/1:1,9:10:29.51:211,30,0	1/1:2,12:14:32.38:218,32,0	1/1:2,17:19:44.66:329,45,0	1/1:0,15:15:41.44:286,41,0	1/1:3,6:9:9.05:83,9,0	1/1:1,16:17:47.65:363,48,0	1/1:0,7:7:20.96:171,21,0	1/1:3,7:10:26.29:177,26,0	1/1:0,6:6:17.95:143,18,0
chr10	16141530	.	TG	T	11181.09	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=0.460;DP=330;FS=0.000;HRun=1;HaplotypeScore=190.8393;InbreedingCoeff=0.7249;MQ=40.90;MQ0=0;MQRankSum=-0.983;QD=34.72;ReadPosRankSum=2.037;VQSLOD=4.3885;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,24:25:57.18:737,57,0	1/1:0,4:4:12.04:151,12,0	0/0:5,0:3:4.15:0,4,49	0/0:3,0:2:0.95:0,1,23	1/1:0,11:11:27.09:348,27,0	1/1:0,12:12:33.11:429,33,0	1/1:2,19:21:59.85:747,60,0	1/1:0,12:12:30.57:387,31,0	1/1:0,12:12:36.12:473,36,0	1/1:1,14:15:42.13:537,42,0	1/1:0,14:14:32.91:376,33,0	1/1:0,11:11:30.02:394,30,0	1/1:0,13:13:39.06:472,39,0	1/1:0,18:18:54.17:703,54,0	1/1:1,16:17:48.14:617,48,0	1/1:0,15:15:45.15:587,45,0	1/1:0,10:10:21.07:273,21,0	1/1:0,4:4:12.04:155,12,0	1/1:0,7:7:21.07:275,21,0	1/1:1,11:12:32.58:414,33,0	1/1:1,13:14:30.98:370,31,0	1/1:0,17:17:48.09:591,48,0	1/1:0,12:12:36.07:446,36,0	1/1:0,8:8:21.02:253,21,0	1/1:0,12:12:36.12:473,36,0	1/1:2,9:11:33.09:403,33,0	1/1:0,9:9:27.05:334,27,0	1/1:0,6:6:18.06:234,18,0
chr10	16141561	.	TG	T	13324.08	PASS	AB=0.778;AC=53;AF=0.946;AN=56;BaseQRankSum=-1.842;DP=440;FS=2.116;HRun=2;HaplotypeScore=153.0752;InbreedingCoeff=0.4843;MQ=52.89;MQ0=0;MQRankSum=-1.592;QD=30.49;ReadPosRankSum=2.282;VQSLOD=4.5469;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,26:26:45.15:584,45,0	1/1:0,5:5:12.04:156,12,0	0/0:3,0:2:5.60:0,6,42	0/1:5,2:6:32.04:32,0,42	1/1:0,14:14:30.10:389,30,0	1/1:0,12:12:30.10:389,30,0	1/1:1,23:24:39.13:506,39,0	1/1:1,17:19:51.17:662,51,0	1/1:0,19:19:45.15:584,45,0	1/1:0,22:22:66.21:857,66,0	1/1:0,16:16:42.14:545,42,0	1/1:4,16:20:51.15:647,51,0	1/1:0,17:17:48.16:623,48,0	1/1:0,22:22:51.17:661,51,0	1/1:1,19:20:51.17:661,51,0	1/1:1,16:17:48.16:622,48,0	1/1:0,15:15:33.11:428,33,0	1/1:0,13:13:36.12:467,36,0	1/1:2,7:9:21.07:270,21,0	1/1:1,16:17:27.09:350,27,0	1/1:1,25:26:66.21:856,66,0	1/1:0,22:22:45.15:584,45,0	1/1:0,12:12:36.12:467,36,0	1/1:0,12:12:27.09:350,27,0	1/1:3,10:13:24.08:311,24,0	1/1:0,18:18:54.18:701,54,0	1/1:1,16:17:42.14:545,42,0	1/1:0,3:3:6.02:78,6,0
chr10	16142263	.	GA	G	10489.16	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=6.839;DP=636;FS=0.334;HRun=9;HaplotypeScore=67.7851;InbreedingCoeff=0.9978;MQ=74.42;MQ0=0;MQRankSum=-1.265;QD=23.41;ReadPosRankSum=2.712;VQSLOD=5.6907;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,31:32:84.04:769,84,0	0/0:9,0:9:21.06:0,21,242	0/0:18,0:17:32.85:0,33,306	0/0:15,0:15:27.13:0,27,284	0/0:28,0:28:78.23:0,78,900	1/1:2,19:21:57.03:522,57,0	1/1:1,22:23:66.03:604,66,0	1/1:4,38:42:99:1026,114,0	1/1:3,18:21:51.02:467,51,0	0/0:29,0:29:78.22:0,78,887	0/0:15,0:15:45.13:0,45,519	1/1:3,15:18:42.02:384,42,0	1/1:1,27:28:69.04:631,69,0	1/1:1,16:17:48.02:439,48,0	1/1:4,26:30:75.02:686,75,0	1/1:0,26:26:72.04:659,72,0	0/0:26,2:28:26.29:0,26,790	1/1:4,28:32:78.03:714,78,0	1/1:4,25:29:72:650,72,0	1/1:2,16:18:48.02:439,48,0	1/1:2,24:26:69.04:631,69,0	1/1:3,21:24:51.02:466,51,0	1/1:1,17:18:47.86:439,48,0	1/1:2,21:23:57.03:522,57,0	1/1:1,19:20:48.02:439,48,0	0/0:22,0:22:60.18:0,60,690	0/0:18,0:18:51.13:0,51,568	0/0:6,0:6:18.05:0,18,208
chr10	16142638	.	CGTGGGT	C	754.23	PASS	AB=0.815;AC=3;AF=0.054;AN=56;BaseQRankSum=5.676;DP=512;FS=14.272;HRun=0;HaplotypeScore=136.2685;InbreedingCoeff=-0.0660;MQ=67.27;MQ0=0;MQRankSum=-5.293;QD=14.23;ReadPosRankSum=-2.308;VQSLOD=1.5702;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:16,9:25:99:281,0,673	0/0:4,0:4:9.03:0,9,227	0/0:12,0:11:20.21:0,20,445	0/0:13,0:13:19.18:0,19,667	0/0:13,0:13:36.12:0,36,1058	0/0:23,0:23:60.17:0,60,1422	0/0:44,0:44:99:0,120,3453	0/0:24,0:24:69.11:0,69,1346	0/0:10,0:10:30.09:0,30,799	0/0:14,0:14:33.11:0,33,937	0/0:9,0:9:21.06:0,21,553	0/1:10,7:17:99:500,0,166	0/0:24,0:24:72.19:0,72,2223	0/0:20,0:20:60.18:0,60,1752	0/0:12,0:12:11.97:0,12,182	0/1:11,0:11:50.79:72,0,51	0/0:30,0:30:87.20:0,87,2702	0/0:19,0:19:14.84:0,15,320	0/0:12,0:12:27.01:0,27,516	0/0:6,0:6:12.51:0,13,305	0/0:53,0:53:99:0,111,3235	0/0:7,0:7:21.07:0,21,517	0/0:5,0:5:15.05:0,15,388	0/0:43,0:43:99:0,124,3332	0/0:17,0:17:9:0,9,110	0/0:21,0:21:54.10:0,54,1212	0/0:19,0:18:54.19:0,54,1610	0/0:5,0:5:15.05:0,15,379
chr10	16142644	.	T	TGTGGGCATGGCC	4632.32	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-2.381;DP=527;FS=0.566;HRun=0;HaplotypeScore=189.7969;InbreedingCoeff=0.9087;MQ=67.64;MQ0=0;MQRankSum=-8.198;QD=40.28;ReadPosRankSum=1.773;VQSLOD=4.4439;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:25:41.57:930,42,0	0/0:3,0:3:9.03:0,9,280	0/0:11,0:10:4.83:0,5,112	0/0:15,0:15:32.94:0,33,455	0/0:12,0:12:31.33:0,31,1003	0/0:20,0:20:56.99:0,57,1225	0/0:45,0:45:99:0,129,3409	0/0:26,0:26:65.29:0,65,1005	0/0:11,0:11:30.05:0,30,728	0/0:14,0:14:38.97:0,39,715	0/0:8,0:8:18.04:0,18,470	1/1:17,0:17:45.07:1287,45,0	0/0:26,0:26:74.85:0,75,2276	0/0:22,0:22:63.04:0,63,1625	1/1:5,12:20:15.05:657,15,0	1/1:0,9:9:9.03:538,9,0	0/0:32,0:32:84.04:0,84,2443	1/1:2,18:26:15.05:855,15,0	0/0:10,0:10:26.99:0,27,420	0/0:5,0:5:11.55:0,12,233	0/0:49,0:49:99:0,135,2938	0/0:7,0:7:20.96:0,21,537	0/0:6,0:6:11.93:0,12,237	0/0:43,0:43:99:0,115,3233	1/1:1,14:18:7.27:366,7,0	0/0:20,0:20:50.46:0,50,864	0/0:21,0:20:62.91:0,63,1697	0/0:6,0:6:15.05:0,15,312
chr10	16142876	.	GCA	G	2838.57	PASS	AB=0.924;AC=17;AF=0.304;AN=56;BaseQRankSum=10.157;DP=717;FS=4.768;HRun=0;HaplotypeScore=86.4960;InbreedingCoeff=0.4676;MQ=61.88;MQ0=5;MQRankSum=1.980;QD=8.23;ReadPosRankSum=6.866;VQSLOD=2.5637;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:15,27:45:68.65:724,69,0	0/0:8,0:8:2.22:0,2,261	0/0:9,1:5:2.97:0,3,20	0/0:17,0:5:3:0,3,32	0/0:11,0:11:24.02:0,24,308	0/0:22,3:25:15.57:0,16,605	0/1:48,3:51:15.77:16,0,1022	0/0:24,0:24:32.05:0,32,435	0/1:23,4:27:13.84:14,0,632	0/0:21,0:21:39.10:0,39,534	0/0:11,0:11:24.04:0,24,300	1/1:7,37:45:6.47:531,6,0	0/1:28,2:29:1.82:2,0,701	0/0:25,4:28:33.53:0,34,735	1/1:4,15:20:23.88:249,24,0	1/1:4,28:32:19.99:472,20,0	0/0:30,1:30:36.76:0,37,973	1/1:13,22:36:55.12:600,55,0	0/0:23,0:23:10.86:0,11,371	0/0:8,0:8:15.04:0,15,213	0/0:80,3:82:8.96:0,9,2073	0/0:16,0:16:14.12:0,14,362	0/0:8,0:9:21.03:0,21,265	0/0:33,1:34:24.81:0,25,995	1/1:5,17:23:32.93:369,33,0	0/1:22,4:26:27.18:27,0,440	0/0:11,1:12:0.53:0,1,406	0/1:10,0:10:17.53:18,0,235
chr10	16144141	.	C	CGTT	27627.67	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-12.517;DP=743;FS=3.923;HRun=0;HaplotypeScore=94.1575;InbreedingCoeff=0.9998;MQ=76.14;MQ0=0;MQRankSum=-6.779;QD=55.04;ReadPosRankSum=1.040;VQSLOD=6.9366;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,38:39:96.29:2153,96,0	0/0:11,0:11:27.05:0,27,422	0/0:18,0:18:42.14:0,42,703	0/0:16,0:16:42.11:0,42,658	0/0:28,0:28:81.25:0,81,1324	1/1:1,21:23:54.19:1243,54,0	1/1:7,22:30:66.23:1490,66,0	1/1:8,23:33:90.28:1943,90,0	1/1:1,21:22:63.22:1451,63,0	0/0:35,0:35:99:0,102,1711	0/0:23,0:23:63.22:0,63,1067	1/1:1,23:25:63.22:1452,63,0	1/1:5,27:32:84.25:1840,84,0	1/1:2,31:34:87.26:1950,87,0	1/1:4,36:43:99:2431,108,0	1/1:4,34:39:87.29:1973,87,0	0/0:24,0:24:72.25:0,72,1223	1/1:1,23:25:54.19:1242,54,0	1/1:2,13:15:39.12:830,39,0	1/1:2,25:27:75.26:1680,75,0	1/1:3,17:20:48.16:1106,48,0	1/1:4,20:24:51.17:1146,51,0	1/1:2,22:25:66.18:1469,66,0	1/1:3,22:25:54.66:1241,55,0	1/1:1,18:21:45.11:987,45,0	0/0:28,0:28:78.27:0,78,1327	0/0:40,0:40:99:0,120,2034	0/0:18,0:18:54.18:0,54,920
chr10	16144754	.	AC	A	3071.15	PASS	AB=0.987;AC=42;AF=0.750;AN=56;BaseQRankSum=9.228;DP=343;FS=12.778;HRun=1;HaplotypeScore=137.3594;InbreedingCoeff=-0.3048;MQ=63.28;MQ0=0;MQRankSum=-6.867;QD=8.95;ReadPosRankSum=7.925;VQSLOD=-0.4845;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:39,0:39:42.64:415,43,0	1/1:5,0:5:14.73:92,15,0	0/1:6,1:7:6.11:6,0,57	0/1:6,0:6:8.07:8,0,38	0/1:7,0:7:23.09:23,0,40	0/1:5,0:5:20.39:41,0,20	1/1:17,0:17:40.65:225,41,0	0/1:12,0:12:28.58:29,0,43	0/1:13,0:13:14.92:143,0,15	1/1:7,0:7:13.55:75,14,0	1/1:7,0:7:3.36:73,3,0	1/1:22,0:22:12.53:282,13,0	1/1:9,0:9:5.55:133,6,0	1/1:16,1:17:30.36:270,30,0	0/1:15,0:15:17.39:140,0,17	1/1:14,0:14:19.93:168,20,0	0/1:18,0:18:7.23:153,0,7	0/1:14,0:14:5.73:80,0,6	1/1:10,0:10:25.65:138,26,0	0/1:5,0:5:17.37:17,0,36	0/1:31,2:32:47.24:215,0,47	1/1:8,1:9:2.80:70,3,0	1/1:3,0:3:5.52:25,6,0	1/1:15,0:15:6.42:126,6,0	0/1:11,0:11:26.24:67,0,26	1/1:12,0:12:29.47:149,29,0	0/1:5,0:5:12.52:13,0,28	0/1:6,0:6:15.36:50,0,15
chr10	16144779	.	GA	G	3072.74	PASS	AB=0.976;AC=50;AF=0.893;AN=56;BaseQRankSum=5.851;DP=292;FS=4.393;HRun=1;HaplotypeScore=128.8733;InbreedingCoeff=0.1643;MQ=72.84;MQ0=0;MQRankSum=-4.308;QD=10.90;ReadPosRankSum=5.153;VQSLOD=2.1403;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:32,0:32:61.76:393,62,0	1/1:5,1:6:3.72:68,4,0	0/0:10,0:10:7.70:0,8,201	0/1:10,0:10:22.27:22,0,142	0/1:6,0:6:0:0,0,0	1/1:1,1:2:5.97:49,6,0	1/1:15,0:15:38.48:252,38,0	1/1:8,1:9:2.10:59,2,0	1/1:13,0:13:23.26:186,23,0	1/1:3,0:3:5.54:28,6,0	1/1:4,0:4:8.91:62,9,0	1/1:14,0:14:41.41:269,41,0	1/1:8,0:8:17.47:102,17,0	1/1:15,0:15:38.27:246,38,0	1/1:12,0:12:23.67:154,24,0	1/1:11,0:11:12.33:159,12,0	1/1:14,0:14:31.42:200,31,0	1/1:12,0:12:9.35:146,9,0	0/1:17,2:19:6.01:175,0,6	1/1:6,1:7:5.71:33,6,0	1/1:23,0:23:22.40:139,22,0	1/1:2,0:2:2.68:11,3,0	0/1:5,0:5:15.55:16,0,16	1/1:13,1:14:1:110,1,0	1/1:9,2:11:0.65:128,1,0	1/1:9,0:9:20.64:127,21,0	1/1:3,0:3:1.82:5,2,0	1/1:3,0:3:8.79:52,9,0
chr10	16145027	.	A	AT	12762.40	PASS	AB=0.818;AC=53;AF=0.946;AN=56;BaseQRankSum=2.522;DP=405;FS=0.000;HRun=3;HaplotypeScore=349.0786;InbreedingCoeff=0.5687;MQ=56.58;MQ0=0;MQRankSum=-4.384;QD=32.15;ReadPosRankSum=2.903;VQSLOD=2.8689;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,18:21:39.60:540,40,0	1/1:1,6:7:18.06:252,18,0	0/1:7,2:9:54.97:87,0,55	0/0:8,0:8:13.89:0,14,69	1/1:5,13:18:34.67:465,35,0	1/1:2,17:19:45.15:629,45,0	1/1:2,12:14:30.10:419,30,0	1/1:5,18:23:45.15:629,45,0	1/1:1,7:8:21.07:293,21,0	1/1:1,20:21:60.20:833,60,0	1/1:1,13:14:39.13:544,39,0	1/1:3,13:16:42.10:562,42,0	1/1:2,14:16:42.14:586,42,0	1/1:4,12:16:33.11:461,33,0	1/1:3,17:20:51.17:712,51,0	1/1:0,20:20:57.19:796,57,0	1/1:2,5:7:13.86:172,14,0	1/1:3,7:10:24.08:335,24,0	1/1:9,5:14:21.01:251,21,0	1/1:5,20:25:57.19:795,57,0	1/1:0,4:4:12.04:167,12,0	1/1:1,13:14:39.13:544,39,0	1/1:3,10:13:30.10:412,30,0	1/1:0,6:6:10.56:165,11,0	1/1:5,16:21:48.12:648,48,0	1/1:6,11:17:39.13:544,39,0	1/1:2,18:20:54.18:753,54,0	1/1:0,4:4:12.04:168,12,0
chr10	16145037	.	C	CTT	19045.71	PASS	AB=1.000;AC=53;AF=0.946;AN=56;BaseQRankSum=1.050;DP=416;FS=0.000;HRun=2;HaplotypeScore=349.0188;InbreedingCoeff=0.6588;MQ=45.34;MQ0=0;MQRankSum=-3.823;QD=46.23;ReadPosRankSum=1.589;VQSLOD=3.3296;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,16:21:54.09:914,54,0	1/1:4,5:9:27.01:407,27,0	0/1:6,0:6:0.82:1,0,62	0/0:4,0:4:4.49:0,4,15	1/1:1,13:14:39.09:673,39,0	1/1:2,16:18:42.14:785,42,0	1/1:4,12:16:36.12:665,36,0	1/1:9,15:24:57.16:1016,57,0	1/1:1,8:9:27.09:492,27,0	1/1:5,17:22:60.17:1059,60,0	1/1:1,14:15:45.11:802,45,0	1/1:3,13:16:45.15:831,45,0	1/1:4,16:20:60.09:992,60,0	1/1:6,10:16:45.04:732,45,0	1/1:3,18:21:60.21:1110,60,0	1/1:4,18:22:63.18:1122,63,0	1/1:4,7:11:27.09:477,27,0	1/1:2,7:9:24.08:436,24,0	1/1:2,5:7:18.06:326,18,0	1/1:4,19:23:66.10:1118,66,0	1/1:1,5:6:12.04:224,12,0	1/1:7,11:18:51.09:832,51,0	1/1:7,9:16:42.01:661,42,0	1/1:1,6:7:17.97:257,18,0	1/1:5,16:21:60.09:1044,60,0	1/1:5,14:19:54.10:916,54,0	1/1:5,18:23:63.17:1110,63,0	1/1:3,0:3:5.97:44,6,0
chr10	16145739	.	G	GAC	4358.90	PASS	AB=0.657;AC=23;AF=0.411;AN=56;BaseQRankSum=3.216;DP=754;FS=2.957;HRun=0;HaplotypeScore=166.4343;InbreedingCoeff=0.5720;MQ=61.75;MQ0=19;MQRankSum=-3.872;QD=13.45;ReadPosRankSum=-0.229;VQSLOD=4.4152;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:28:5.84:52,6,0	1/1:5,4:9:15.05:226,15,0	0/0:59,0:21:13.54:0,14,124	0/0:49,0:17:2.52:0,3,18	1/1:5,5:11:12.03:183,12,0	0/0:25,0:31:59.16:0,59,557	0/0:35,1:39:5.14:0,5,452	0/0:23,0:23:8.10:0,8,159	0/0:29,0:30:38.94:0,39,415	0/1:10,10:20:57.34:326,0,57	0/1:6,8:14:7.33:302,0,7	1/1:26,0:37:44.40:359,44,0	0/0:28,0:30:62.81:0,63,669	0/0:30,0:31:56.99:0,57,621	1/1:21,0:32:36.43:302,36,0	1/1:23,0:37:59.37:483,59,0	0/1:15,20:35:36.57:504,0,37	1/1:14,0:15:14.98:128,15,0	0/0:12,0:11:9.01:0,9,93	0/0:12,0:14:29.29:0,29,311	0/0:42,0:49:99:0,101,1009	0/0:16,0:16:33.09:0,33,372	0/0:13,0:13:24.07:0,24,268	0/0:28,0:34:52.69:0,53,536	1/1:18,0:22:23.65:188,24,0	1/1:6,10:17:30.05:392,30,0	0/1:11,17:30:33.06:548,0,33	0/1:9,6:15:6.18:366,0,6
chr10	16145794	.	G	GTA	6089.16	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=14.874;DP=869;FS=37.786;HRun=0;HaplotypeScore=191.9501;InbreedingCoeff=0.9978;MQ=55.63;MQ0=8;MQRankSum=-13.952;QD=32.05;ReadPosRankSum=-2.957;VQSLOD=2.8711;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,16:21:20.87:401,21,0	0/0:7,0:7:21.07:0,21,320	0/0:36,0:15:26:0,26,428	0/0:41,0:26:37.12:0,37,593	0/0:30,0:30:87.29:0,87,1317	0/0:30,0:30:84.23:0,84,1215	0/0:51,0:51:99:0,141,2089	0/0:31,0:31:93.23:0,93,1279	0/0:29,0:29:87.24:0,87,1259	0/0:30,0:30:81.24:0,81,1132	0/0:21,0:21:60.15:0,60,831	1/1:12,23:35:35.77:931,36,0	0/0:33,0:33:96.26:0,96,1376	0/0:41,0:41:99:0,120,1780	1/1:12,28:41:80.76:1500,81,0	1/1:16,36:52:99:1988,108,0	0/0:31,0:31:71.99:0,72,1054	1/1:8,6:14:26.85:365,27,0	0/0:23,0:20:60.20:0,60,893	0/0:15,0:15:42.05:0,42,549	0/0:75,0:75:99:0,210,2915	0/0:20,0:20:57.16:0,57,819	0/0:22,0:22:60.17:0,60,871	0/0:36,0:36:99:0,102,1456	1/1:7,19:26:51.07:904,51,0	0/0:32,0:32:93.28:0,93,1321	0/0:32,0:32:87.03:0,87,1163	0/0:12,0:12:36.07:0,36,487
chr10	16145810	.	A	ATG	6599.35	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=11.071;DP=886;FS=8.417;HRun=0;HaplotypeScore=169.3846;InbreedingCoeff=0.9974;MQ=58.87;MQ0=7;MQRankSum=-12.245;QD=33.84;ReadPosRankSum=-1.122;VQSLOD=5.9609;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,19:27:45.15:757,45,0	0/0:9,0:9:21.07:0,21,270	0/0:37,0:25:47.15:0,47,611	0/0:41,0:32:52.04:0,52,629	0/0:31,0:31:81.25:0,81,1027	0/0:28,0:28:63.20:0,63,810	0/0:56,0:56:99:0,135,1719	0/0:37,0:37:93.29:0,93,1175	0/0:36,0:36:96.28:0,96,1204	0/0:30,0:30:78.25:0,78,992	0/0:20,0:20:48.16:0,48,615	1/1:7,26:33:59.83:1008,60,0	0/0:33,0:33:78.24:0,78,989	0/0:37,0:37:90.29:0,90,1158	1/1:8,29:37:70.63:1350,71,0	1/1:4,51:56:99:2121,126,0	0/0:33,0:33:68.96:0,69,856	1/1:2,7:8:18.06:303,18,0	0/0:27,0:24:57.18:0,57,732	0/0:16,0:16:42.10:0,42,524	0/0:67,0:67:99:0,159,2005	0/0:20,0:20:57.18:0,57,733	0/0:20,0:20:48.16:0,48,617	0/0:43,0:43:99:0,123,1534	1/1:6,26:32:63.22:1061,63,0	0/0:29,0:29:78.25:0,78,1004	0/0:28,0:28:75.07:0,75,907	0/0:13,0:13:29.92:0,30,385
chr10	16149264	.	A	ATCTTTC	22757.76	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-9.181;DP=696;FS=2.981;HRun=0;HaplotypeScore=141.7317;InbreedingCoeff=0.9998;MQ=83.61;MQ0=0;MQRankSum=-19.816;QD=80.13;ReadPosRankSum=-4.040;VQSLOD=4.5913;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,117,2667	0/0:12,0:12:33.11:0,33,767	0/0:30,0:30:46.43:0,46,1423	0/0:21,0:22:60.10:0,60,1288	0/0:21,0:21:63.22:0,63,1512	1/1:2,17:23:54.18:1869,54,0	1/1:5,16:23:54.19:1873,54,0	1/1:15,17:36:96.30:3029,96,0	1/1:4,22:26:78.27:2561,78,0	0/0:24,0:24:66.23:0,66,1585	0/0:13,0:13:39.13:0,39,915	0/0:30,0:30:87.30:0,87,2043	1/1:1,17:25:54.19:1907,54,0	1/1:3,17:22:60.21:2103,60,0	0/0:30,0:30:87.28:0,87,2044	0/0:34,0:34:99:0,102,2426	0/0:34,0:34:96.29:0,96,2187	0/0:29,0:29:87.22:0,87,1936	1/1:8,9:18:54.17:1592,54,0	1/1:1,21:23:60.21:2136,60,0	1/1:7,13:23:45.15:1429,45,0	1/1:2,14:19:42.11:1497,42,0	1/1:8,16:24:63.21:1871,63,0	1/1:5,13:22:28.86:891,29,0	0/0:15,0:15:45.15:0,45,1079	0/0:30,0:30:90.30:0,90,2065	0/0:37,0:36:99:0,111,2523	0/0:11,0:11:33.11:0,33,768
chr10	16149831	.	CA	C	647.06	PASS	AB=0.783;AC=21;AF=0.389;AN=54;BaseQRankSum=-1.320;DP=433;FS=3.582;HRun=16;HaplotypeScore=56.6806;InbreedingCoeff=0.5081;MQ=46.74;MQ0=12;MQRankSum=4.402;QD=3.32;ReadPosRankSum=1.645;VQSLOD=-0.3471;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:25:12.09:0,12,146	0/1:5,1:7:3.31:3,0,56	./.	0/0:5,1:2:2.97:0,3,20	0/0:8,1:11:14.58:0,15,83	0/1:13,11:27:8.59:107,0,9	1/1:9,8:18:12.21:64,12,0	1/1:9,11:20:17.16:106,17,0	0/1:14,3:17:2.60:53,0,3	0/0:7,1:9:11.81:0,12,78	0/0:11,0:17:27.61:0,28,167	0/0:13,0:16:5.70:0,6,111	1/1:4,4:9:16.20:87,16,0	0/1:14,3:18:47.16:47,0,70	0/0:11,0:12:29.44:0,29,190	0/0:8,0:17:20.07:0,20,108	0/0:26,0:29:32.22:0,32,257	0/0:13,1:14:2.54:0,3,92	1/1:13,7:20:0.94:89,1,0	1/1:10,5:17:10.61:59,11,0	1/1:3,2:6:7.91:42,8,0	1/1:5,3:9:5.60:36,6,0	0/1:9,5:11:35.61:39,0,36	1/1:2,6:9:17.33:98,17,0	0/0:9,0:16:23.19:0,23,134	0/0:12,0:20:31.91:0,32,200	0/0:11,0:20:29.55:0,30,173	0/0:6,0:7:11.52:0,12,68
chr10	16151101	.	G	GC	5875.75	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-8.449;DP=602;FS=3.008;HRun=4;HaplotypeScore=61.2904;InbreedingCoeff=0.9956;MQ=72.72;MQ0=0;MQRankSum=-0.579;QD=33.20;ReadPosRankSum=3.855;VQSLOD=5.5324;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,38:41:90.30:1216,90,0	0/0:10,0:10:27.07:0,27,302	0/0:10,0:10:20.22:0,20,235	0/0:13,0:13:32.72:0,33,304	0/0:14,0:14:36.16:0,36,424	0/0:18,0:18:50.75:0,51,530	0/0:30,0:30:81.14:0,81,858	0/0:15,0:15:38.77:0,39,411	0/0:21,0:21:63.11:0,63,679	0/0:15,0:15:39.08:0,39,422	0/0:11,0:11:29.76:0,30,317	1/1:1,36:37:96.30:1286,96,0	0/0:20,0:20:51.13:0,51,567	0/0:19,0:19:51.11:0,51,557	1/1:3,20:23:54.14:713,54,0	1/1:3,23:26:75.24:997,75,0	0/0:41,0:41:99:0,120,1296	1/1:2,33:35:87.29:1181,87,0	0/0:16,0:16:45.05:0,45,469	0/0:7,0:7:20.09:0,20,210	0/0:62,0:62:99:0,163,1765	0/0:16,0:16:42.12:0,42,471	0/0:15,0:15:27.07:0,27,306	0/0:26,0:26:78.15:0,78,847	1/1:1,13:15:36.12:483,36,0	0/0:18,0:18:32.09:0,32,400	0/0:22,0:22:57.13:0,57,619	0/0:6,0:6:18.03:0,18,191
chr10	16151715	.	G	GAGCTGGTGTT	29913.59	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-5.616;DP=646;FS=7.870;HRun=0;HaplotypeScore=183.2150;InbreedingCoeff=0.9994;MQ=83.24;MQ0=0;MQRankSum=-18.999;QD=104.23;ReadPosRankSum=-2.799;VQSLOD=4.0644;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,108,3143	0/0:9,0:9:27.09:0,27,811	0/0:21,0:21:51.15:0,51,1269	0/0:26,0:26:51.14:0,51,1377	0/0:24,0:24:66.23:0,66,2033	1/1:10,8:22:48.04:1819,48,0	1/1:20,14:37:99:4454,99,0	1/1:19,4:26:69.21:2829,69,0	1/1:7,13:23:54.19:2660,54,0	0/0:10,0:10:24.08:0,24,727	0/0:12,0:12:30.09:0,30,762	0/0:35,0:35:99:0,99,3015	1/1:7,14:24:54.19:2729,54,0	1/1:9,12:23:63.13:2881,63,0	0/0:26,0:26:69.24:0,69,2133	0/0:19,0:19:54.19:0,54,1709	0/0:31,0:31:87.30:0,87,2795	0/0:30,0:30:87.26:0,87,2709	1/1:11,6:20:57.17:1880,57,0	1/1:5,11:17:45.15:2181,45,0	1/1:13,11:27:48:1841,48,0	1/1:14,12:28:69.06:2689,69,0	1/1:1,9:13:29.86:1564,30,0	1/1:12,11:27:54.10:2387,54,0	0/0:18,0:18:51.18:0,51,1617	0/0:18,0:18:51.17:0,51,1573	0/0:19,0:19:57.18:0,57,1532	0/0:20,0:20:60.21:0,60,1938
chr10	16152137	.	G	GA	8368.32	PASS	AB=0.688;AC=34;AF=0.607;AN=56;BaseQRankSum=-11.557;DP=625;FS=14.122;HRun=10;HaplotypeScore=71.9243;InbreedingCoeff=0.7076;MQ=76.52;MQ0=1;MQRankSum=-0.353;QD=19.19;ReadPosRankSum=2.356;VQSLOD=4.6267;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,31:34:69.17:736,69,0	0/0:8,0:8:20.98:0,21,172	0/0:28,0:22:34.03:0,34,221	0/1:20,0:18:5.45:5,0,131	0/0:26,0:27:12.24:0,12,397	0/1:4,13:17:22.22:197,0,22	1/1:3,25:28:63.16:672,63,0	1/1:11,27:38:53.44:723,53,0	1/1:4,17:21:42.10:446,42,0	0/0:25,0:25:62.89:0,63,517	0/0:15,0:16:34.97:0,35,276	1/1:1,17:18:45.11:480,45,0	1/1:6,20:26:35.51:583,36,0	1/1:3,13:16:28.81:318,29,0	1/1:6,21:28:56.97:587,57,0	1/1:5,21:26:54.14:576,54,0	0/0:25,1:26:39.90:0,40,531	0/1:8,17:25:45.50:403,0,46	1/1:3,15:19:47.89:466,48,0	1/1:5,19:24:20.40:399,20,0	1/1:3,13:16:8.44:295,8,0	1/1:4,9:13:27.03:276,27,0	0/1:6,13:20:0.84:182,0,1	1/1:3,23:26:1.84:430,2,0	1/1:6,15:21:57.12:593,57,0	0/0:20,0:21:46.08:0,46,374	0/0:27,0:27:61.69:0,62,492	0/0:10,0:10:29.96:0,30,246
chr10	16156892	.	CAGGGACAAGGGACA	C	12211.63	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=13.229;DP=719;FS=0.456;HRun=0;HaplotypeScore=289.7528;InbreedingCoeff=0.8914;MQ=75.83;MQ0=0;MQRankSum=-12.483;QD=26.49;ReadPosRankSum=0.582;VQSLOD=3.2238;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:37:27.01:655,27,0	0/0:6,0:6:15.05:0,15,941	0/0:34,0:34:7.84:0,8,264	0/0:34,0:33:24.05:0,24,744	0/0:28,0:28:48.16:0,48,2642	1/1:15,14:29:33.11:1231,33,0	1/1:16,7:23:18.06:643,18,0	1/1:26,0:26:6.01:83,6,0	1/1:20,11:31:21.07:809,21,0	0/0:28,0:28:36.12:0,36,2136	0/0:23,0:23:45.14:0,45,2507	1/1:23,0:35:24.08:782,24,0	1/1:9,18:27:45.15:1755,45,0	1/1:13,11:24:30.10:1170,30,0	1/1:14,0:27:30.05:827,30,0	1/1:16,0:37:32.59:1073,33,0	0/0:48,0:48:96.33:0,96,5621	1/1:10,0:17:9.03:293,9,0	1/1:12,3:15:12.03:398,12,0	1/1:11,11:22:24.08:858,24,0	1/1:23,11:34:2.86:179,3,0	1/1:13,5:18:9.03:351,9,0	1/1:9,10:19:16.78:635,17,0	1/1:16,5:21:7.75:322,8,0	1/1:13,0:18:8.99:146,9,0	0/0:29,0:29:57.20:0,57,3468	0/0:25,0:25:57.20:0,57,3461	0/0:3,0:3:9.03:0,9,592
chr10	16157200	.	TGAGGTGCCAACCGCCTGTAA	T	12649.65	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=13.165;DP=485;FS=5.062;HRun=0;HaplotypeScore=258.0954;InbreedingCoeff=0.9446;MQ=91.12;MQ0=0;MQRankSum=-13.431;QD=150.59;ReadPosRankSum=4.032;VQSLOD=4.0515;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,20:20:54.19:3065,54,0	0/0:8,0:8:21.07:0,21,1610	0/0:25,0:25:75.26:0,75,4985	0/0:22,0:22:60.21:0,60,3302	0/0:9,0:9:27.09:0,27,2045	0/0:13,0:13:36.12:0,36,3246	0/0:32,0:32:96.33:0,96,7710	0/0:21,0:21:63.22:0,63,4374	0/0:30,0:30:90.31:0,90,8162	0/0:19,0:19:57.18:0,57,4470	0/0:6,0:6:15.04:0,15,651	1/1:0,12:12:36.12:2094,36,0	0/0:20,0:20:60.21:0,60,5525	0/0:27,0:27:78.27:0,78,6583	1/1:0,19:19:54.19:3104,54,0	1/1:0,20:20:57.20:3250,57,0	0/0:28,0:28:84.29:0,84,7758	1/1:0,10:10:18.06:993,18,0	0/0:16,0:16:48.16:0,48,3372	0/0:7,0:7:21.07:0,21,1838	0/0:34,0:34:99:0,99,7658	0/0:11,0:11:30.10:0,30,2161	0/0:7,0:7:21.07:0,21,1782	0/0:30,0:30:90.29:0,90,7635	1/1:0,3:3:3.01:143,3,0	0/0:15,0:15:45.15:0,45,3301	0/0:18,0:18:54.19:0,54,4582	0/0:3,0:3:9.03:0,9,884
chr10	16158828	.	A	AGG	530.77	PASS	AB=1.000;AC=21;AF=0.477;AN=44;BaseQRankSum=3.601;DP=105;FS=3.559;HRun=3;HaplotypeScore=28.7080;InbreedingCoeff=0.3452;MQ=48.63;MQ0=1;MQRankSum=-1.821;QD=9.00;ReadPosRankSum=-1.065;VQSLOD=0.0575;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:5:5.14:0,5,34	0/0:1,0:1:2.74:0,3,12	0/0:2,0:0:2.68:0,3,11	0/1:3,0:1:0:0,0,0	./.	1/1:0,3:3:3.01:31,3,0	1/1:6,1:6:14.92:119,15,0	1/1:12,1:13:4:209,4,0	./.	0/0:4,0:4:7.35:0,7,84	./.	0/1:5,0:5:24.92:25,0,64	1/1:3,0:3:2.97:20,3,0	1/1:2,0:2:2.97:20,3,0	1/1:3,0:3:2.92:17,3,0	0/0:4,0:4:12.04:0,12,142	0/0:3,0:3:5.99:0,6,48	./.	0/1:7,0:7:39.56:40,0,65	1/1:3,0:3:5.93:40,6,0	1/1:4,1:5:3.01:39,3,0	1/1:2,3:5:9.03:108,9,0	./.	./.	0/0:9,0:8:0.98:0,1,57	0/0:4,0:4:7.99:0,8,72	0/0:1,0:1:3:0,3,25	0/0:1,0:1:3.01:0,3,38
chr10	16161770	.	CA	C	20897.87	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=11.486;DP=791;FS=2.446;HRun=2;HaplotypeScore=77.9314;InbreedingCoeff=0.9994;MQ=84.01;MQ0=0;MQRankSum=-4.007;QD=36.41;ReadPosRankSum=3.476;VQSLOD=5.5832;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,46:47:99:1635,126,0	0/0:11,0:11:33.07:0,33,452	0/0:13,1:14:22.14:0,22,502	0/0:33,0:33:93.19:0,93,1309	0/0:21,0:21:60.16:0,60,869	1/1:0,26:26:72.23:935,72,0	1/1:0,36:36:99:1364,105,0	1/1:0,35:35:99:1324,102,0	1/1:0,31:31:87.28:1130,87,0	0/0:32,0:32:93.31:0,93,1378	0/0:22,0:22:66.22:0,66,989	1/1:0,41:41:99:1480,114,0	1/1:0,33:33:93.27:1208,93,0	1/1:0,24:24:69.22:896,69,0	1/1:0,39:39:99:1402,108,0	1/1:0,29:29:78.25:1013,78,0	0/0:31,0:31:90.30:0,90,1349	1/1:0,39:39:99:1480,114,0	1/1:0,17:17:51.14:643,51,0	1/1:0,31:31:84.27:1091,84,0	1/1:1,42:43:99:1558,120,0	1/1:0,25:25:69.22:896,69,0	1/1:0,34:34:99:1285,99,0	1/1:1,25:26:69.22:896,69,0	1/1:0,18:18:51.17:662,51,0	0/0:25,0:25:75.25:0,75,1107	0/0:17,0:17:51.16:0,51,746	0/0:11,0:11:33.11:0,33,495
chr10	16167525	.	C	CA	2566.28	PASS	AB=0.807;AC=39;AF=0.696;AN=56;BaseQRankSum=5.285;DP=615;FS=6.599;HRun=14;HaplotypeScore=106.5394;InbreedingCoeff=0.1436;MQ=72.40;MQ0=1;MQRankSum=-3.970;QD=4.62;ReadPosRankSum=-4.516;VQSLOD=0.8187;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:14,26:40:21:305,0,21	0/0:8,0:9:19.75:0,20,121	0/1:27,0:18:1.14:1,0,10	0/1:15,1:12:11.40:15,0,11	0/1:19,3:22:9.83:10,0,66	1/1:8,0:25:14.32:76,14,0	1/1:6,2:17:14.20:71,14,0	1/1:25,0:34:45.21:226,45,0	1/1:8,0:17:12.42:64,12,0	0/1:21,2:23:21.11:21,0,139	0/1:16,5:21:49.69:50,0,104	0/1:8,10:18:23.53:57,0,24	1/1:11,0:17:20.70:97,21,0	1/1:18,0:31:32.23:156,32,0	0/1:6,16:23:8.65:167,0,9	0/1:8,4:13:0.84:22,0,1	0/0:31,0:33:47.89:0,48,298	1/1:8,18:27:44.79:374,45,0	1/1:17,0:23:31.45:171,31,0	1/1:13,0:24:47.71:241,48,0	1/1:10,2:20:16.09:79,16,0	1/1:11,0:17:25.57:136,26,0	1/1:16,0:18:22.44:122,22,0	1/1:6,0:20:8.04:44,8,0	1/1:9,7:17:0.14:214,0,0	0/0:16,0:17:19.62:0,20,121	0/1:16,6:22:9.07:9,0,78	0/1:18,1:22:11.72:12,0,132
chr10	16167779	.	AC	A	4747.77	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=10.557;DP=622;FS=11.221;HRun=4;HaplotypeScore=128.6066;InbreedingCoeff=0.9932;MQ=83.71;MQ0=0;MQRankSum=-4.205;QD=32.08;ReadPosRankSum=3.507;VQSLOD=3.1963;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,37:39:87.27:1042,87,0	0/0:4,0:4:12.04:0,12,168	0/0:20,0:20:54.18:0,54,745	0/0:21,0:21:55.40:0,55,719	0/0:17,0:17:45.11:0,45,572	0/0:11,0:11:27.09:0,27,377	0/0:35,0:35:93.30:0,93,1284	0/0:32,0:32:96.30:0,96,1312	0/0:25,1:26:42.53:0,43,998	0/0:24,0:24:69.22:0,69,951	0/0:12,0:12:36.12:0,36,504	1/1:0,18:18:51.16:612,51,0	0/0:24,0:24:69.23:0,69,964	0/0:34,0:34:99:0,102,1411	1/1:0,23:23:69.21:828,69,0	1/1:0,21:21:63.19:755,63,0	0/0:43,0:43:99:0,129,1789	1/1:0,34:34:90.28:1080,90,0	0/0:20,0:20:54.15:0,54,733	0/0:15,0:15:45.14:0,45,612	0/0:39,0:39:99:0,117,1635	0/0:9,0:9:27.09:0,27,377	0/0:12,0:12:30.10:0,30,412	0/0:23,0:23:69.22:0,69,949	1/1:0,13:13:36.11:432,36,0	0/0:21,0:21:60.19:0,60,818	0/0:19,0:19:54.17:0,54,738	0/0:13,0:13:39.11:0,39,526
chr10	16168070	.	CT	C	959.86	PASS	AB=0.836;AC=14;AF=0.259;AN=54;BaseQRankSum=1.794;DP=517;FS=4.301;HRun=14;HaplotypeScore=62.3248;InbreedingCoeff=0.0941;MQ=71.92;MQ0=10;MQRankSum=1.325;QD=4.40;ReadPosRankSum=1.485;VQSLOD=1.3655;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:13.76:0,14,379	./.	0/0:45,0:19:12.04:0,12,183	0/0:35,2:17:14.55:0,15,197	1/1:7,12:19:11.82:195,12,0	0/0:19,0:17:45:0,45,404	0/1:16,2:18:8.11:8,0,218	0/0:31,0:32:45.91:0,46,495	0/0:12,0:12:9.29:0,9,193	0/1:7,1:8:16.01:45,0,16	0/1:8,4:12:35.04:63,0,35	0/1:14,0:14:1.14:1,0,195	0/0:7,0:8:14.85:0,15,125	0/1:8,0:8:2.57:3,0,113	0/0:14,0:15:29.85:0,30,256	0/0:16,0:16:12.51:0,13,258	0/1:19,16:37:29.20:293,0,29	0/1:18,2:20:16.60:17,0,278	0/1:22,2:25:15.95:16,0,258	0/0:13,0:13:8.35:0,8,204	0/0:8,0:8:15.02:0,15,139	0/0:10,2:12:3.38:0,3,160	0/0:15,0:15:9.25:0,9,210	0/0:22,2:24:12.91:0,13,398	0/0:11,0:11:24.03:0,24,222	0/1:9,10:19:1.20:138,0,1	0/1:10,11:21:16.18:150,0,16	1/1:4,13:17:26.76:185,27,0
chr10	16169138	.	TGTTACGTAGG	T	15967.05	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=17.183;DP=685;FS=3.888;HRun=0;HaplotypeScore=215.0130;InbreedingCoeff=0.9731;MQ=85.53;MQ0=0;MQRankSum=-16.301;QD=65.71;ReadPosRankSum=-0.193;VQSLOD=4.5712;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:47:99:0,138,7268	0/0:10,0:10:27.09:0,27,1370	0/0:25,0:25:72.24:0,72,3187	0/0:26,0:26:78.26:0,78,3355	0/0:32,0:32:93.32:0,93,4751	1/1:1,17:18:42.14:1399,42,0	1/1:4,12:16:24.08:800,24,0	1/1:6,19:25:57.17:1550,57,0	1/1:3,22:25:63.22:2099,63,0	0/0:26,0:26:75.26:0,75,3435	0/0:21,0:21:63.22:0,63,3135	0/0:29,0:29:81.26:0,81,4055	1/1:1,18:20:42.07:1398,42,0	1/1:2,19:21:51.18:1699,51,0	0/0:36,0:36:99:0,108,5290	0/0:25,0:25:75.26:0,75,3844	0/0:36,0:36:99:0,108,5624	0/0:25,0:25:72.25:0,72,3711	1/1:2,18:20:48.15:1426,48,0	1/1:0,22:22:51.18:1649,51,0	1/1:7,14:21:15.52:500,16,0	1/1:1,24:25:57.20:1850,57,0	1/1:0,21:21:43.41:1496,43,0	1/1:5,4:9:3.01:100,3,0	0/0:30,0:30:90.31:0,90,4576	0/0:31,0:31:93.32:0,93,4547	0/0:31,0:31:93.32:0,93,4770	0/0:11,0:11:30.10:0,30,1586
chr10	16169737	.	C	CT	1570.11	PASS	AB=0.902;AC=30;AF=0.536;AN=56;BaseQRankSum=5.626;DP=529;FS=9.999;HRun=14;HaplotypeScore=138.7270;InbreedingCoeff=-0.1873;MQ=64.11;MQ0=1;MQRankSum=-5.069;QD=3.69;ReadPosRankSum=-3.058;VQSLOD=-0.2071;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,2:42:20.91:0,21,367	1/1:1,5:12:6.21:132,6,0	0/0:17,0:12:10.15:0,10,52	0/0:13,0:10:5.35:0,5,26	0/1:9,6:14:43.11:50,0,43	0/1:13,0:13:32.56:33,0,47	0/1:26,0:26:75.50:79,0,76	0/1:27,0:27:22.47:22,0,67	0/1:11,0:10:31.14:42,0,31	1/1:19,4:24:6.95:150,7,0	1/1:8,10:19:25.38:216,25,0	0/0:17,0:17:18.09:0,18,104	0/1:20,0:20:16.99:80,0,17	0/1:20,0:19:18.43:88,0,18	0/1:18,1:19:23.21:42,0,23	0/0:13,0:15:22.40:0,22,129	0/1:11,20:32:16.74:96,0,17	0/1:26,3:30:52.21:52,0,124	0/1:20,0:19:12.39:55,0,12	1/1:5,0:5:10.01:38,10,0	1/1:12,0:11:2.59:9,3,0	1/1:16,0:16:8.31:81,8,0	0/1:20,0:17:39.82:52,0,40	0/1:23,0:23:3.27:68,0,3	0/1:8,1:9:11.91:22,0,12	0/1:11,10:22:5.59:188,0,6	1/1:8,8:16:7.06:84,7,0	0/1:7,6:13:7.50:61,0,8
chr10	16169746	.	T	TTTTGTTG	7280.30	PASS	AB=0.900;AC=22;AF=0.393;AN=56;BaseQRankSum=7.869;DP=555;FS=3.451;HRun=0;HaplotypeScore=160.1606;InbreedingCoeff=0.8178;MQ=54.00;MQ0=4;MQRankSum=-10.240;QD=30.85;ReadPosRankSum=2.951;VQSLOD=4.7456;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,132,2364	0/0:15,0:15:35.57:0,36,396	0/0:14,0:7:14.75:0,15,181	0/0:11,0:6:8.03:0,8,71	0/0:16,0:15:35.92:0,36,495	1/1:12,0:12:18.54:378,19,0	1/1:29,0:29:52.05:1007,52,0	1/1:28,0:27:6.02:541,6,0	1/1:17,0:15:26.97:510,27,0	0/0:27,0:27:71.87:0,72,912	0/0:18,0:18:44.37:0,44,501	0/0:16,0:16:48.02:0,48,733	1/1:21,0:21:23.78:835,24,0	0/1:18,3:23:8.61:751,0,9	0/0:17,0:17:42.13:0,42,696	0/0:17,0:17:42.13:0,42,759	0/0:30,0:30:31.40:0,31,394	0/0:31,0:31:52.15:0,52,1182	0/1:22,0:20:60.50:566,0,61	1/1:5,0:8:14.86:331,15,0	1/1:14,0:10:10.94:197,11,0	1/1:15,0:15:25.79:747,26,0	1/1:22,0:19:37.76:712,38,0	1/1:23,0:23:31.66:706,32,0	0/0:9,0:9:13.85:0,14,198	0/0:19,0:19:51.05:0,51,673	0/0:21,0:21:29.70:0,30,368	0/0:13,0:12:18.04:0,18,273
chr10	16169748	.	T	TG	529.17	PASS	AB=0.729;AC=12;AF=0.214;AN=56;BaseQRankSum=10.610;DP=543;FS=3.323;HRun=0;HaplotypeScore=118.5397;InbreedingCoeff=-0.1597;MQ=53.98;MQ0=4;MQRankSum=-7.818;QD=2.47;ReadPosRankSum=5.595;VQSLOD=2.4228;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,127,1348	0/0:15,0:15:22.91:0,23,174	0/0:14,0:7:17.90:0,18,191	0/0:11,0:6:8.98:0,9,77	0/0:17,0:16:27.85:0,28,300	0/1:6,5:11:46.49:46,0,48	0/1:16,10:26:81.42:81,0,88	0/1:22,4:25:96.59:117,0,97	0/1:11,6:15:26.08:50,0,26	0/0:28,0:28:68.09:0,68,536	0/0:19,0:19:24.02:0,24,186	0/0:17,0:17:47.89:0,48,468	0/1:12,9:21:47.06:81,0,47	0/1:14,10:23:58.66:117,0,59	0/0:16,0:16:44.74:0,45,393	0/0:18,0:18:48.02:0,48,509	0/0:29,0:29:21.99:0,22,181	0/0:30,0:30:71.31:0,71,677	0/1:17,4:19:47.68:48,0,89	0/0:8,2:9:8.25:0,8,60	1/1:11,0:7:0.06:22,0,0	0/1:7,8:15:42.25:47,0,42	0/1:14,8:19:14.69:15,0,106	0/1:9,11:20:50.44:52,0,50	0/0:8,0:8:15.83:0,16,142	0/0:20,0:20:33.79:0,34,282	0/0:20,0:20:36.41:0,36,301	0/0:12,0:11:12.08:0,12,115
chr10	16169749	.	T	TTGTTG	8004.19	PASS	AB=0.647;AC=23;AF=0.411;AN=56;BaseQRankSum=8.106;DP=561;FS=5.179;HRun=0;HaplotypeScore=137.6040;InbreedingCoeff=0.8670;MQ=53.91;MQ0=4;MQRankSum=-9.829;QD=33.08;ReadPosRankSum=2.201;VQSLOD=4.2699;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,126,2177	0/0:15,0:15:34.60:0,35,373	0/0:15,0:8:11.63:0,12,188	0/0:11,0:6:8.21:0,8,77	0/0:17,0:16:42.11:0,42,595	1/1:5,5:10:24.83:413,25,0	1/1:9,10:30:56.69:1016,57,0	1/1:15,5:31:24.19:802,24,0	1/1:4,7:17:20.68:468,21,0	0/0:28,0:28:73.42:0,73,969	0/0:19,0:19:43.01:0,43,537	0/0:17,0:17:48.10:0,48,729	1/1:6,10:25:20.06:802,20,0	1/1:11,10:22:0.37:792,0,0	0/0:14,0:14:42.14:0,42,697	0/0:18,0:18:48.15:0,48,811	0/0:29,0:29:28.61:0,29,344	0/0:31,0:31:76.90:0,77,1164	0/1:10,4:20:16.40:659,0,16	1/1:8,2:10:23.91:375,24,0	1/1:12,0:8:12.46:258,12,0	1/1:7,8:15:17.81:761,18,0	1/1:14,8:19:37.22:791,37,0	1/1:10,11:21:43.30:868,43,0	0/0:7,0:7:15.76:0,16,197	0/0:20,0:20:54.15:0,54,709	0/0:20,0:20:44.83:0,45,527	0/0:12,0:11:18.06:0,18,276
chr10	16170249	.	C	CATCCATGC	8192.74	PASS	AB=1.000;AC=25;AF=0.446;AN=56;BaseQRankSum=7.662;DP=808;FS=16.940;HRun=0;HaplotypeScore=287.2859;InbreedingCoeff=0.8904;MQ=61.65;MQ0=1;MQRankSum=-5.369;QD=18.70;ReadPosRankSum=-4.367;VQSLOD=2.3866;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:58.55:0,59,1276	0/0:12,0:12:12.22:0,12,106	0/1:9,0:9:25:25,0,159	0/0:15,0:14:9.03:0,9,164	0/0:11,0:11:15.52:0,16,222	1/1:19,0:19:48:880,48,0	1/1:61,0:61:89.57:922,90,0	1/1:39,0:39:73.37:721,73,0	1/1:22,15:38:31.16:814,31,0	0/0:21,0:18:32.92:0,33,418	0/0:16,0:16:26.25:0,26,320	0/0:49,0:49:99:0,123,2948	1/1:44,0:44:74.82:1323,75,0	1/1:47,0:46:83.73:1210,84,0	0/0:31,0:31:63.22:0,63,1516	0/0:26,0:26:57.18:0,57,1312	0/0:33,0:32:60.08:0,60,899	0/0:28,0:28:63.22:0,63,1469	1/1:25,0:25:26.93:379,27,0	1/1:21,0:21:33.28:431,33,0	1/1:66,0:66:33.42:555,33,0	1/1:19,0:19:11.92:246,12,0	1/1:20,0:20:12.01:242,12,0	1/1:30,0:30:41.39:445,41,0	0/0:22,0:22:51.17:0,51,1196	0/0:40,0:40:92.37:0,92,1151	0/0:20,0:20:36.01:0,36,475	0/0:7,0:7:5.97:0,6,49
chr10	16170261	.	C	CATGCATCC	9168.53	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=7.762;DP=790;FS=13.550;HRun=0;HaplotypeScore=267.3463;InbreedingCoeff=0.9377;MQ=69.20;MQ0=1;MQRankSum=-5.339;QD=22.47;ReadPosRankSum=-3.066;VQSLOD=2.5792;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:57:0,57,1272	0/0:12,0:12:12.22:0,12,106	0/0:14,0:14:9.02:0,9,171	0/0:19,0:19:9.03:0,9,164	0/0:13,0:13:15.52:0,16,222	1/1:25,0:25:51.01:970,51,0	1/1:55,0:55:95.59:1031,96,0	1/1:30,0:30:58.23:620,58,0	1/1:36,0:36:34.17:913,34,0	0/0:21,0:18:32.97:0,33,418	0/0:18,0:18:26.99:0,27,321	0/0:49,0:49:99:0,123,2948	1/1:44,0:44:92.88:1893,93,0	1/1:45,0:44:86.76:1306,87,0	0/0:30,0:30:63.22:0,63,1516	0/0:27,0:27:5.39:0,5,1257	0/0:34,0:33:60.08:0,60,899	0/0:29,0:29:66.23:0,66,1547	1/1:15,0:15:24:494,24,0	1/1:21,0:21:33.15:431,33,0	1/1:67,0:67:36.39:575,36,0	1/1:20,0:20:11.92:246,12,0	1/1:8,7:19:12.01:242,12,0	1/1:31,0:31:42.76:448,43,0	0/0:23,0:23:51.17:0,51,1196	0/0:38,0:38:95.23:0,95,1165	0/0:18,0:18:36.04:0,36,475	0/0:4,0:4:5.99:0,6,49
chr10	16170391	.	CG	C	14924.87	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=10.531;DP=758;FS=0.974;HRun=6;HaplotypeScore=78.6882;InbreedingCoeff=0.9972;MQ=81.05;MQ0=0;MQRankSum=-4.025;QD=27.59;ReadPosRankSum=3.886;VQSLOD=5.3815;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,49:50:99:1547,144,0	0/0:13,0:13:33.11:0,33,429	0/0:16,0:16:39.11:0,39,484	0/0:27,0:27:75.15:0,75,882	0/0:18,0:18:54.16:0,54,693	1/1:2,12:14:36.09:387,36,0	1/1:3,40:43:99:1160,108,0	1/1:2,11:13:33.07:344,33,0	1/1:0,37:37:99:1127,105,0	0/0:32,0:33:87.27:0,87,1111	0/0:10,0:10:24.08:0,24,316	1/1:3,33:36:99:1063,99,0	1/1:3,25:28:69.17:740,69,0	1/1:5,35:40:93.23:998,93,0	1/1:2,21:23:63.16:677,63,0	1/1:1,23:24:63.16:677,63,0	0/0:45,0:45:99:0,129,1613	1/1:2,39:41:99:1083,102,0	1/1:3,18:21:54.13:579,54,0	1/1:3,17:20:45.11:484,45,0	1/1:5,47:52:99:1450,135,0	1/1:1,20:21:57.14:612,57,0	1/1:1,18:19:39.10:419,39,0	1/1:3,26:29:69.17:742,69,0	1/1:4,26:30:78.19:836,78,0	0/0:25,0:25:72.18:0,72,914	0/0:25,0:25:69.21:0,69,894	0/0:5,0:5:15.05:0,15,197
chr10	16170397	.	GT	G	2757.69	PASS	AB=1.000;AC=30;AF=0.536;AN=56;BaseQRankSum=18.534;DP=760;FS=1.947;HRun=2;HaplotypeScore=118.2725;InbreedingCoeff=0.5033;MQ=79.78;MQ0=0;MQRankSum=-2.174;QD=5.05;ReadPosRankSum=8.450;VQSLOD=0.2814;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:56,0:56:21.76:249,0,22	0/0:17,0:17:51.08:0,51,616	0/0:16,0:16:45.12:0,45,594	0/0:27,0:27:71.39:0,71,1017	0/0:20,0:20:60.02:0,60,791	1/1:12,0:12:26.84:95,27,0	1/1:43,0:43:12.58:199,13,0	0/1:16,0:16:20.15:20,0,105	1/1:37,0:37:82.26:322,82,0	0/0:33,0:33:96.30:0,96,1342	0/0:9,0:9:27.08:0,27,371	1/1:36,1:37:0.04:169,0,0	1/1:27,1:28:12.90:217,13,0	1/1:36,0:36:52.57:258,53,0	1/1:22,2:24:22.74:162,23,0	0/1:26,0:26:24.95:89,0,25	0/0:40,0:40:99:0,120,1706	1/1:41,0:41:38.03:213,38,0	0/1:24,0:24:84.56:86,0,85	1/1:18,0:18:1.35:88,1,0	0/1:52,0:52:12.21:223,0,12	1/1:20,0:20:39.49:142,39,0	1/1:18,0:18:28.98:111,29,0	0/1:29,0:29:13.01:116,0,13	1/1:28,1:29:25.23:203,25,0	0/0:24,0:24:72.24:0,72,1044	0/0:23,0:23:66.22:0,66,959	0/0:5,0:5:15.05:0,15,219
chr10	16171862	.	TCTTTC	T	15126.30	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=17.220;DP=753;FS=2.870;HRun=0;HaplotypeScore=150.7481;InbreedingCoeff=0.9906;MQ=89.79;MQ0=0;MQRankSum=-14.212;QD=44.75;ReadPosRankSum=1.140;VQSLOD=4.6363;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,132,3766	0/0:7,0:7:21.07:0,21,618	0/0:30,0:30:84.25:0,84,2365	0/0:33,0:33:96.28:0,96,2448	0/0:23,0:23:66.23:0,66,2043	1/1:1,21:22:51.13:974,51,0	1/1:3,37:40:84.29:1662,84,0	1/1:5,25:30:75.20:1433,75,0	1/1:1,29:30:81.28:1669,81,0	0/0:22,0:22:63.21:0,63,1826	0/0:8,0:8:24.08:0,24,711	0/0:27,0:27:81.28:0,81,2477	1/1:0,39:39:90.31:1887,90,0	1/1:3,34:37:93.28:1907,93,0	0/0:34,0:34:99:0,99,2985	0/0:52,0:52:99:0,144,4344	0/0:33,0:33:99:0,99,2996	0/0:27,0:27:72.25:0,72,2203	1/1:4,20:24:60.21:1227,60,0	1/1:2,12:14:30.05:562,30,0	1/1:8,33:41:53.81:1040,54,0	1/1:2,14:16:24.04:446,24,0	1/1:0,5:5:9.03:180,9,0	1/1:1,39:40:99:2140,102,0	0/0:13,0:13:36.12:0,36,1047	0/0:21,0:21:57.20:0,57,1577	0/0:25,0:25:75.26:0,75,2303	0/0:12,0:12:36.12:0,36,1072
chr10	16172553	.	G	GA	6442.10	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-14.185;DP=626;FS=6.159;HRun=9;HaplotypeScore=58.5236;InbreedingCoeff=0.9993;MQ=78.53;MQ0=0;MQRankSum=0.510;QD=26.95;ReadPosRankSum=-0.118;VQSLOD=5.1310;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,102,871	0/0:13,0:13:38.99:0,39,339	0/0:23,0:23:30.59:0,31,256	0/0:20,0:20:35.96:0,36,312	0/0:26,0:26:74.97:0,75,647	1/1:1,15:16:42.11:465,42,0	1/1:2,15:17:42.11:465,42,0	1/1:7,35:42:82.26:1106,82,0	1/1:0,15:15:42.11:465,42,0	0/0:28,0:28:49.98:0,50,552	0/0:17,0:17:41.97:0,42,361	0/0:24,0:24:59.95:0,60,517	1/1:7,13:20:30.08:332,30,0	1/1:1,17:18:48.13:531,48,0	0/0:28,0:28:80.95:0,81,695	0/0:20,1:21:23.81:0,24,435	0/0:33,0:33:83.98:0,84,729	0/0:34,0:34:83.97:0,84,729	1/1:2,18:20:51.11:551,51,0	1/1:4,24:28:72.10:769,72,0	1/1:1,13:14:36.10:398,36,0	1/1:2,10:12:30.08:332,30,0	1/1:3,18:21:54.15:597,54,0	1/1:2,14:16:39.11:431,39,0	0/0:25,0:25:65.97:0,66,573	0/0:18,0:18:47.97:0,48,414	0/0:27,0:27:68.86:0,69,579	0/0:9,0:9:26.99:0,27,234
chr10	16174685	.	AGC	A	13088.50	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=14.498;DP=646;FS=7.046;HRun=0;HaplotypeScore=81.5552;InbreedingCoeff=0.9999;MQ=81.55;MQ0=1;MQRankSum=-1.931;QD=46.25;ReadPosRankSum=1.375;VQSLOD=6.1232;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,105,2096	0/0:11,0:11:30.10:0,30,593	0/0:22,0:22:66.23:0,66,1295	0/0:18,0:18:44.20:0,44,980	0/0:17,0:17:51.18:0,51,1035	1/1:0,18:18:51.17:832,51,0	1/1:0,18:18:48.16:783,48,0	1/1:0,25:25:75.26:1213,75,0	1/1:0,20:20:60.20:979,60,0	0/0:21,0:21:63.22:0,63,1276	0/0:15,0:15:45.14:0,45,879	0/0:24,0:24:72.25:0,72,1463	1/1:0,26:26:75.26:1224,75,0	1/1:0,21:21:63.22:1028,63,0	0/0:25,0:25:75.24:0,75,1454	0/0:25,0:25:75.26:0,75,1524	0/0:40,0:40:99:0,114,2304	0/0:24,0:24:72.25:0,72,1459	1/1:0,23:23:69.22:1101,69,0	1/1:0,24:24:66.22:1065,66,0	1/1:0,36:36:99:1586,99,0	1/1:0,19:19:54.18:881,54,0	1/1:1,17:18:48.03:780,48,0	1/1:0,35:34:99:1615,99,0	0/0:18,0:18:54.15:0,54,1023	0/0:22,0:22:63.21:0,63,1237	0/0:31,0:31:93.31:0,93,1853	0/0:15,0:15:45.15:0,45,900
chr10	16175113	.	CAATAA	C	10837.97	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=11.776;DP=534;FS=8.145;HRun=0;HaplotypeScore=106.1484;InbreedingCoeff=0.9591;MQ=78.73;MQ0=1;MQRankSum=-3.167;QD=30.97;ReadPosRankSum=1.580;VQSLOD=3.9172;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:11,20:31:43.39:841,43,0	0/0:9,0:9:9.03:0,9,242	0/0:19,0:17:15.05:0,15,360	0/0:25,0:21:17.44:0,17,513	0/0:18,0:18:39.09:0,39,957	1/1:6,20:26:51.17:957,51,0	1/1:5,8:13:15.05:281,15,0	1/1:8,14:22:42.14:742,42,0	1/1:3,10:13:18.06:338,18,0	0/0:26,0:26:48.16:0,48,1291	0/0:13,0:13:33.11:0,33,934	1/1:6,17:23:45.15:845,45,0	1/1:6,12:18:33.11:619,33,0	1/1:4,17:21:42.14:788,42,0	1/1:9,11:20:33.11:601,33,0	1/1:10,14:24:39.13:732,39,0	0/0:21,0:21:51.18:0,51,1451	1/1:6,23:29:51.17:957,51,0	1/1:9,9:18:27.05:440,27,0	1/1:8,14:22:39.13:732,39,0	1/1:4,3:7:4.26:110,4,0	1/1:7,9:16:21.07:394,21,0	1/1:3,9:12:14.74:282,15,0	1/1:8,13:21:30.10:563,30,0	1/1:2,12:14:33.11:616,33,0	0/0:22,0:22:51.18:0,51,1468	0/0:16,0:16:24.08:0,24,654	0/0:14,0:14:36.12:0,36,1036
chr10	16177210	.	T	TCACA	1585.99	PASS	AB=0.820;AC=20;AF=0.417;AN=48;BaseQRankSum=-3.619;DP=697;FS=4.905;HRun=0;HaplotypeScore=115.7141;InbreedingCoeff=0.3182;MQ=68.94;MQ0=17;MQRankSum=-0.370;QD=4.39;ReadPosRankSum=-2.238;VQSLOD=1.8041;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:30:12.01:0,12,112	0/0:3,0:3:6.02:0,6,90	./.	./.	0/0:18,0:19:12.03:0,12,154	1/1:9,0:17:2.74:12,3,0	0/1:25,8:39:7.68:286,0,8	1/1:25,0:25:0.94:2,1,0	0/1:13,6:22:53.31:254,0,53	0/0:16,0:18:1.77:0,2,25	0/1:16,0:18:3.45:3,0,43	0/0:15,0:23:23.84:0,24,223	0/1:17,5:25:16.15:141,0,16	1/1:16,6:28:10.85:220,11,0	0/0:22,0:31:27.04:0,27,270	0/0:11,0:15:9.02:0,9,102	0/0:33,0:33:27.06:0,27,361	0/0:19,0:30:30.03:0,30,279	1/1:23,0:23:21.53:360,22,0	./.	0/1:41,14:67:31.94:93,0,32	1/1:9,0:15:3.01:52,3,0	1/1:11,3:17:6.02:139,6,0	1/1:26,2:39:11.51:165,12,0	0/0:11,0:16:9.01:0,9,84	0/1:20,0:21:16.83:17,0,63	0/0:15,0:17:21.03:0,21,281	./.
chr10	16177670	.	CGAAAAAAAGACCCAAAAA	C	9586.33	PASS	AC=24;AF=0.444;AN=54;BaseQRankSum=12.352;DP=352;FS=18.958;HRun=0;HaplotypeScore=151.6883;InbreedingCoeff=0.9252;MQ=44.04;MQ0=7;MQRankSum=-3.674;QD=56.06;ReadPosRankSum=5.313;VQSLOD=2.7270;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:18:51.10:0,51,1694	0/0:7,0:7:14.97:0,15,515	0/0:1,0:1:3.01:0,3,110	./.	0/0:14,0:14:39.12:0,39,1266	1/1:0,19:19:24.08:1189,24,0	1/1:3,24:24:21.07:1028,21,0	1/1:0,0:13:38.81:814,39,0	1/1:0,10:10:11.77:622,12,0	0/0:14,0:14:42.14:0,42,1358	0/0:15,0:15:41.85:0,42,1594	0/0:12,0:11:29.84:0,30,1255	1/1:0,19:19:18.06:934,18,0	1/1:1,12:13:9.03:464,9,0	0/0:16,0:16:42.11:0,42,1603	0/0:9,0:9:24.03:0,24,634	0/0:15,0:15:32.84:0,33,995	0/0:15,0:13:39.03:0,39,1450	1/1:0,0:14:20.09:788,20,0	1/1:3,0:7:14.98:441,15,0	1/1:2,1:7:3.67:156,4,0	1/1:0,12:12:23.77:972,24,0	1/1:0,10:9:12.04:622,12,0	1/1:0,18:18:30.10:1556,30,0	0/0:14,0:14:33.08:0,33,1269	0/0:15,0:15:45.10:0,45,1271	0/0:8,0:8:24.07:0,24,1258	0/0:6,0:6:18.06:0,18,590
chr10	16177678	.	AGACCC	A	3187.19	PASS	AB=0.980;AC=29;AF=0.537;AN=54;BaseQRankSum=9.433;DP=406;FS=59.522;HRun=0;HaplotypeScore=123.0383;InbreedingCoeff=0.5454;MQ=42.22;MQ0=3;MQRankSum=-1.861;QD=12.16;ReadPosRankSum=4.957;VQSLOD=0.7653;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:21:28.97:0,29,610	0/0:7,0:7:14.77:0,15,188	0/0:3,0:1:3.01:0,3,38	./.	0/1:19,1:20:50.81:51,0,467	1/1:19,0:19:24.08:358,24,0	1/1:24,0:24:21.07:321,21,0	1/1:13,0:13:23.58:444,24,0	1/1:10,0:10:11.91:173,12,0	0/0:16,0:17:42.96:0,43,515	0/0:18,0:18:28.75:0,29,495	0/1:24,0:22:3.27:3,0,453	1/1:19,0:19:18.06:261,18,0	1/1:13,0:13:9.03:129,9,0	0/0:19,2:21:13.89:0,14,530	0/0:10,0:10:25.29:0,25,284	0/1:20,0:20:87.86:88,0,334	0/0:17,0:14:7.37:0,7,464	1/1:14,0:14:13.73:384,14,0	1/1:4,1:5:12.51:205,13,0	1/1:8,0:7:3.01:50,3,0	1/1:12,0:12:18.06:263,18,0	1/1:10,0:9:12.04:178,12,0	1/1:18,0:18:30.10:437,30,0	0/1:18,1:19:33.97:34,0,541	0/0:16,1:17:11.41:0,11,477	0/1:14,0:14:2.26:2,0,374	0/0:11,0:11:0.56:0,1,259
chr10	16178459	.	TACACACAC	T	994.52	PASS	AB=0.988;AC=25;AF=0.463;AN=54;BaseQRankSum=1.688;DP=539;FS=3.134;HRun=0;HaplotypeScore=135.4684;InbreedingCoeff=-0.0116;MQ=63.82;MQ0=28;MQRankSum=-1.966;QD=3.16;ReadPosRankSum=-0.870;VQSLOD=2.6445;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:30:23.11:0,23,156	0/1:5,0:5:3.08:3,0,7	0/0:31,0:18:3.01:0,3,41	0/0:32,0:20:2.97:0,3,20	0/0:11,0:11:3.77:0,4,25	1/1:9,1:9:6.02:101,6,0	1/1:16,16:32:5.99:59,6,0	0/0:25,0:24:7.01:0,7,28	1/1:13,7:18:5.86:125,6,0	0/0:23,0:22:11.92:0,12,180	0/1:12,0:9:16.11:16,0,17	0/1:12,0:11:9.86:10,0,70	0/1:8,1:9:17.32:68,0,17	1/1:10,4:13:5.98:96,6,0	0/0:20,0:19:2.94:0,3,140	0/1:18,0:27:13.17:13,0,98	0/1:18,0:19:24.56:25,0,41	0/0:21,0:20:6.35:0,6,188	1/1:11,1:10:2.39:91,2,0	1/1:9,0:7:5.96:45,6,0	0/1:37,0:34:24.32:191,0,24	1/1:6,7:12:2.97:20,3,0	0/0:8,4:12:0.96:0,1,3	0/1:31,1:28:0.96:224,0,1	0/1:12,0:11:13.27:13,0,62	0/1:25,0:24:30.96:31,0,98	./.	0/1:14,0:14:17.09:17,0,20
chr10	16178529	.	A	AAC	377.06	PASS	AB=0.960;AC=16;AF=0.333;AN=48;BaseQRankSum=4.973;DP=693;FS=4.642;HRun=0;HaplotypeScore=104.3195;InbreedingCoeff=0.4616;MQ=32.77;MQ0=169;MQRankSum=-4.819;QD=1.45;ReadPosRankSum=-0.194;VQSLOD=1.8637;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:33:11.63:0,12,381	0/0:8,0:8:15.05:0,15,187	./.	./.	0/0:26,0:17:15.47:0,15,183	1/1:9,4:11:11.98:128,12,0	1/1:32,0:11:7.14:77,7,0	0/1:37,0:6:14.13:31,0,14	0/1:15,0:7:0.38:13,0,0	0/0:30,0:21:56.95:0,57,629	0/0:22,0:15:13.42:0,13,182	0/0:25,0:20:17.17:0,17,222	./.	1/1:19,1:8:6.02:89,6,0	0/0:33,0:22:29.43:0,29,250	0/0:37,0:32:41.74:0,42,456	0/0:59,0:44:81.05:0,81,944	0/0:38,0:29:24.01:0,24,288	./.	1/1:5,2:3:3.01:43,3,0	0/1:75,2:35:34.48:34,0,46	1/1:9,0:3:0.11:29,0,0	1/1:12,0:6:3.01:33,3,0	0/1:31,5:19:28.71:52,0,29	0/0:10,0:7:4.78:0,5,41	0/0:38,0:30:46.61:0,47,751	0/0:22,0:17:36.07:0,36,428	0/0:9,0:6:7.24:0,7,77
chr10	16178559	.	CACATACACACAA	C	231.85	PASS	AB=0.854;AC=5;AF=0.093;AN=54;BaseQRankSum=5.447;DP=582;FS=6.270;HRun=0;HaplotypeScore=123.4046;InbreedingCoeff=-0.1131;MQ=37.96;MQ0=128;MQRankSum=-3.725;QD=3.18;ReadPosRankSum=-2.543;VQSLOD=1.4373;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:32:43.57:0,44,866	0/0:11,0:11:27.08:0,27,485	./.	0/0:18,0:1:3.01:0,3,46	0/0:19,0:16:23.47:0,23,404	0/1:8,0:7:10.31:10,0,63	0/0:10,0:5:5.93:0,6,55	0/1:11,9:13:94.78:283,0,95	0/0:11,0:4:5.87:0,6,36	0/0:30,0:23:63.61:0,64,1116	0/0:13,0:12:23.97:0,24,382	0/0:22,0:19:29.21:0,29,551	0/0:4,0:2:5.91:0,6,39	0/1:11,0:5:4.82:5,0,17	0/0:35,0:24:37.80:0,38,692	0/0:26,0:23:30.64:0,31,800	0/0:58,0:39:89.69:0,90,1650	0/0:33,0:24:9.85:0,10,288	0/0:8,0:2:5.72:0,6,29	0/1:3,0:3:14.62:19,0,15	0/0:58,0:19:23.75:0,24,267	0/0:11,0:3:2.97:0,3,20	0/0:5,0:3:2.97:0,3,20	0/1:25,0:10:15.76:21,0,16	0/0:8,0:6:12.31:0,12,196	0/0:36,0:30:82.40:0,82,1430	0/0:21,0:18:47.61:0,48,827	0/0:12,0:10:15.30:0,15,357
chr10	16178629	.	A	AACAC	1369.93	PASS	AB=0.979;AC=43;AF=0.896;AN=48;BaseQRankSum=-1.660;DP=599;FS=5.748;HRun=0;HaplotypeScore=120.3810;InbreedingCoeff=0.1699;MQ=38.19;MQ0=111;MQRankSum=0.425;QD=2.62;ReadPosRankSum=-1.949;VQSLOD=1.3236;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:48,1:37:9.85:129,10,0	1/1:10,0:10:0.94:1,1,0	./.	./.	0/0:13,0:12:2.78:0,3,23	1/1:9,0:6:5.99:48,6,0	./.	./.	1/1:15,0:8:10.53:63,11,0	1/1:23,0:19:3.14:8,3,0	0/1:16,0:17:0:0,0,0	1/1:29,0:26:15.20:151,15,0	1/1:7,0:4:8.89:83,9,0	1/1:12,0:6:2.37:8,2,0	1/1:30,9:32:6.02:131,6,0	1/1:18,0:17:2.74:12,3,0	1/1:53,0:39:3.04:115,3,0	0/1:28,0:27:13.04:278,0,13	1/1:12,0:8:2.68:11,3,0	1/1:8,0:11:4.62:12,5,0	1/1:67,0:38:2.97:20,3,0	1/1:11,0:6:3.01:43,3,0	1/1:8,0:4:1.25:3,1,0	1/1:30,0:18:16.62:128,17,0	1/1:16,1:16:12.54:160,13,0	1/1:23,0:17:3.90:38,4,0	0/1:14,0:14:6.41:6,0,22	1/1:9,0:9:3.45:23,3,0
chr10	16178811	.	GATGGAGA	G	9845.08	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=13.667;DP=558;FS=190.337;HRun=0;HaplotypeScore=147.5843;InbreedingCoeff=0.9811;MQ=81.74;MQ0=0;MQRankSum=-15.357;QD=60.03;ReadPosRankSum=-2.527;VQSLOD=1.0785;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,120,4654	0/0:11,0:11:33.11:0,33,1257	0/0:21,0:21:59.95:0,60,2013	0/0:28,0:28:69.22:0,69,2471	0/0:16,0:16:42.14:0,42,1702	1/1:0,8:8:24.08:647,24,0	1/1:2,24:26:57.20:1535,57,0	1/1:1,8:9:24.07:558,24,0	1/1:0,12:12:33.11:860,33,0	0/0:38,0:38:99:0,114,4434	0/0:10,0:10:27.09:0,27,1104	0/0:33,0:33:99:0,99,3848	1/1:0,14:14:42.14:1131,42,0	1/1:1,18:19:54.19:1454,54,0	0/0:32,0:31:87.30:0,87,3373	0/0:28,0:28:84.29:0,84,3427	0/0:27,0:27:81.28:0,81,3210	0/0:23,0:23:69.24:0,69,2742	1/1:3,3:6:9.03:243,9,0	1/1:2,7:9:21.03:504,21,0	1/1:5,21:26:48.16:1284,48,0	1/1:1,14:15:36.08:902,36,0	1/1:0,6:6:18.06:485,18,0	1/1:1,13:14:8.96:243,9,0	0/0:19,0:19:54.19:0,54,2062	0/0:35,0:35:99:0,105,4114	0/0:20,0:20:56.37:0,56,2293	0/0:12,0:12:36.12:0,36,1452
chr10	16179528	.	GGTGTGTGTGTGTGTGT	G	2349.70	PASS	AB=0.796;AC=17;AF=0.370;AN=46;BaseQRankSum=3.032;DP=530;FS=9.846;HRun=0;HaplotypeScore=196.9932;InbreedingCoeff=0.5182;MQ=51.36;MQ0=44;MQRankSum=-2.845;QD=13.20;ReadPosRankSum=-1.909;VQSLOD=1.5469;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:22:21.07:0,21,1034	1/1:5,0:5:0.89:2,1,0	./.	0/0:42,0:15:3.01:0,3,46	./.	1/1:20,3:23:13.84:351,14,0	1/1:14,3:18:9:120,9,0	0/1:32,0:29:45.81:171,0,46	1/1:6,9:15:15.05:617,15,0	0/0:15,0:15:11.98:0,12,257	0/0:13,0:12:3.01:0,3,150	0/0:17,0:16:21.06:0,21,781	0/1:5,0:8:9.96:194,0,10	0/1:9,1:15:99:377,0,153	0/0:19,0:17:24.08:0,24,1410	0/0:19,0:19:38.26:0,38,1450	0/0:19,0:14:21.04:0,21,552	0/0:11,0:10:12.04:0,12,583	1/1:14,3:17:12.04:484,12,0	1/1:6,4:12:3.01:129,3,0	1/1:27,0:20:3.01:63,3,0	./.	./.	./.	0/0:22,0:19:15.85:0,16,463	0/0:15,0:14:12.04:0,12,350	0/0:24,0:23:36.12:0,36,1158	0/0:16,0:12:18.06:0,18,488
chr10	16179813	.	G	GAGTCAGGGAGGAGG	16940.96	PASS	AB=0.689;AC=52;AF=0.963;AN=54;BaseQRankSum=0.471;DP=220;FS=15.798;HRun=0;HaplotypeScore=233.4427;InbreedingCoeff=-0.0847;MQ=42.43;MQ0=0;MQRankSum=-2.431;QD=77.71;ReadPosRankSum=1.840;VQSLOD=2.7976;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,0:9:18.06:659,18,0	1/1:4,0:4:11.05:376,11,0	0/1:1,0:3:17.59:193,0,18	0/1:5,1:7:28.68:402,0,29	1/1:13,0:13:30.10:1642,30,0	1/1:8,0:8:6.02:310,6,0	1/1:10,0:10:15.05:722,15,0	1/1:13,0:13:30.10:1191,30,0	1/1:7,0:7:6.02:299,6,0	1/1:6,0:6:9.03:397,9,0	1/1:3,0:3:5.93:160,6,0	1/1:7,0:7:9.03:400,9,0	1/1:5,0:5:5.05:188,5,0	1/1:7,0:7:14.26:632,14,0	1/1:16,0:16:30.10:1551,30,0	1/1:10,0:10:18.02:550,18,0	1/1:11,0:11:21.07:1040,21,0	1/1:2,0:2:3.01:127,3,0	1/1:4,0:4:9.03:300,9,0	1/1:9,0:9:8.06:307,8,0	1/1:7,0:7:6.02:171,6,0	1/1:7,0:7:15.05:756,15,0	1/1:6,0:6:12.03:458,12,0	1/1:9,0:9:12.04:629,12,0	1/1:15,0:15:27.09:1145,27,0	1/1:15,0:15:39.13:1852,39,0	./.	1/1:5,0:5:12.04:483,12,0
chr10	16183704	.	T	TAAA	6797.58	PASS	AB=1.000;AC=25;AF=0.446;AN=56;BaseQRankSum=4.337;DP=682;FS=1.616;HRun=12;HaplotypeScore=143.6882;InbreedingCoeff=0.9224;MQ=69.70;MQ0=3;MQRankSum=-8.938;QD=23.44;ReadPosRankSum=-5.908;VQSLOD=1.4355;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:44:94.41:0,94,1056	0/0:10,0:10:21:0,21,226	0/0:19,0:8:2.62:0,3,30	0/0:30,0:25:22.73:0,23,197	0/1:20,0:20:2.58:3,0,354	1/1:10,3:16:33.03:453,33,0	1/1:11,6:17:39.13:624,39,0	1/1:22,5:30:40.28:530,40,0	1/1:17,6:23:55.30:754,55,0	0/0:29,0:30:47.17:0,47,511	0/0:27,0:28:37.28:0,37,550	0/0:23,0:25:23.43:0,23,458	1/1:20,4:25:58.15:813,58,0	1/1:21,2:26:42.64:630,43,0	0/0:21,0:22:54.04:0,54,584	0/0:26,0:27:50.95:0,51,560	0/0:33,0:34:55.08:0,55,785	0/0:23,0:24:59.89:0,60,636	1/1:27,2:29:51.06:625,51,0	1/1:17,4:22:33.09:553,33,0	1/1:10,1:11:12.85:150,13,0	1/1:25,8:33:65.96:870,66,0	1/1:9,2:12:22.28:275,22,0	1/1:10,9:22:34.80:518,35,0	0/0:19,0:19:48.06:0,48,522	0/0:24,0:27:56.63:0,57,563	0/0:26,0:28:37.11:0,37,418	0/0:20,0:21:32.44:0,32,354
chr10	16183727	.	AG	A	694.05	PASS	AB=0.990;AC=19;AF=0.339;AN=56;BaseQRankSum=12.626;DP=664;FS=2.863;HRun=1;HaplotypeScore=122.4804;InbreedingCoeff=-0.2981;MQ=63.79;MQ0=3;MQRankSum=-1.350;QD=1.61;ReadPosRankSum=5.512;VQSLOD=-0.7351;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:44,0:44:28.04:28,0,40	0/0:12,0:12:35.89:0,36,374	0/0:20,0:8:11.01:0,11,119	0/0:28,0:17:4.08:0,4,160	0/0:21,0:21:56.73:0,57,654	0/1:15,0:14:20.77:21,0,75	1/1:23,0:23:16.22:82,16,0	0/1:26,0:26:63.83:64,0,113	0/1:24,0:23:39.95:40,0,84	0/0:29,0:29:83.81:0,84,923	0/0:25,0:25:69.58:0,70,670	0/1:26,0:26:22.05:22,0,77	0/1:25,0:25:0.67:101,0,1	0/1:24,0:24:29.53:73,0,30	0/1:21,0:21:15.41:15,0,73	0/1:21,0:21:10.18:10,0,26	0/0:31,0:31:85.92:0,86,956	0/1:27,0:27:22.37:22,0,74	0/1:31,1:32:44.73:67,0,45	0/1:15,0:15:19.01:64,0,19	0/1:15,0:15:3.74:4,0,24	0/1:29,1:29:80.60:96,0,81	0/1:14,1:14:21.28:57,0,21	0/1:20,1:21:38.16:67,0,38	0/1:28,0:27:22.55:23,0,70	0/0:26,0:26:59.71:0,60,844	0/0:25,0:25:67.96:0,68,719	0/0:15,0:15:45.04:0,45,510
chr10	16183728	.	GA	G	6610.05	PASS	AB=0.826;AC=36;AF=0.643;AN=56;BaseQRankSum=8.839;DP=660;FS=4.843;HRun=10;HaplotypeScore=102.4144;InbreedingCoeff=0.8533;MQ=64.65;MQ0=2;MQRankSum=0.669;QD=14.46;ReadPosRankSum=2.478;VQSLOD=5.0626;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,38:44:95.97:833,96,0	0/0:10,0:11:32.92:0,33,345	0/0:18,0:9:21.01:0,21,207	0/1:28,0:17:8.67:9,0,98	0/0:21,0:21:60.10:0,60,635	0/1:7,8:14:4.94:135,0,5	1/1:3,19:22:39.14:428,39,0	1/1:12,14:26:37.16:313,37,0	1/1:10,14:23:25.29:231,25,0	0/0:29,0:29:75.19:0,75,817	0/0:25,0:25:51.07:0,51,530	1/1:8,19:27:14.77:357,15,0	1/1:9,16:25:6.03:299,6,0	1/1:11,13:24:33.12:305,33,0	1/1:6,15:21:38.98:339,39,0	1/1:3,18:21:53.99:469,54,0	0/0:32,0:32:81.17:0,81,868	1/1:4,23:27:53.74:468,54,0	1/1:8,23:31:41.82:590,42,0	1/1:5,9:14:29.84:260,30,0	1/1:2,13:15:26.98:234,27,0	1/1:8,22:29:22.85:432,23,0	1/1:4,11:14:29.67:259,30,0	1/1:7,14:21:32.92:285,33,0	1/1:5,22:26:41.97:365,42,0	0/0:25,1:26:46.15:0,46,730	0/0:25,0:25:56.97:0,57,602	0/0:15,0:15:39.08:0,39,415
chr10	16185778	.	A	AACCTCGATGC	32019.37	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=1.285;DP=693;FS=6.945;HRun=0;HaplotypeScore=210.1066;InbreedingCoeff=0.9975;MQ=77.53;MQ0=0;MQRankSum=-19.526;QD=111.57;ReadPosRankSum=-2.835;VQSLOD=3.7782;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,117,3789	0/0:15,0:15:42.14:0,42,1310	0/0:21,0:21:60.12:0,60,1668	0/0:19,0:19:57.15:0,57,1609	0/0:25,0:25:72.25:0,72,2366	1/1:9,16:25:63.14:2980,63,0	1/1:13,12:30:66.23:3158,66,0	1/1:19,11:36:99:4764,105,0	1/1:3,8:13:27.09:1429,27,0	0/0:29,0:29:87.30:0,87,2821	0/0:16,0:16:42.13:0,42,1273	0/0:34,0:34:99:0,102,3126	1/1:13,15:29:78.16:3596,78,0	1/1:9,19:33:72.20:3644,72,0	0/0:22,0:22:63.21:0,63,1981	0/0:31,0:31:90.30:0,90,2881	0/0:43,0:43:99:0,126,4021	0/0:40,0:40:99:0,117,3627	1/1:6,8:15:42.14:1895,42,0	1/1:12,13:26:51.17:2528,51,0	1/1:12,11:26:45.15:2360,45,0	1/1:5,9:17:39.13:1976,39,0	1/1:5,13:18:45.15:2354,45,0	1/1:8,10:19:27.09:1337,27,0	0/0:17,0:17:51.15:0,51,1593	0/0:27,0:27:75.25:0,75,2419	0/0:23,0:23:69.20:0,69,2187	0/0:5,0:5:15.05:0,15,397
chr10	16186942	.	T	TTTG	6069.80	PASS	AB=0.680;AC=15;AF=0.268;AN=56;BaseQRankSum=-14.864;DP=698;FS=4.295;HRun=0;HaplotypeScore=185.2646;InbreedingCoeff=0.8696;MQ=62.82;MQ0=4;MQRankSum=1.748;QD=31.61;ReadPosRankSum=-0.528;VQSLOD=4.6035;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:47.71:0,48,324	1/1:7,12:19:30.05:472,30,0	0/0:19,0:12:9.03:0,9,112	0/0:24,0:21:7.02:0,7,117	1/1:14,14:28:42.14:820,42,0	0/0:20,0:20:32.74:0,33,229	0/0:16,0:16:42.52:0,43,290	0/0:29,0:29:20.82:0,21,132	0/0:28,0:28:41.46:0,41,289	1/1:13,22:36:66.09:1093,66,0	0/1:9,7:17:17.15:305,0,17	0/0:28,0:28:59.45:0,59,413	0/0:22,0:22:47.19:0,47,324	0/0:27,0:27:39.98:0,40,263	0/0:46,0:46:99:0,101,696	0/0:23,0:23:53.57:0,54,376	1/1:7,15:23:33.11:650,33,0	0/0:28,0:28:39.16:0,39,271	0/0:22,0:22:21.77:0,22,148	0/0:20,0:20:36.20:0,36,255	0/0:26,0:26:37.83:0,38,247	0/0:22,0:22:42.13:0,42,293	0/0:28,0:28:36.65:0,37,251	0/0:23,0:23:44.24:0,44,278	0/0:25,0:25:48.14:0,48,346	1/1:8,15:23:7.05:721,7,0	1/1:5,24:29:63.22:1241,63,0	1/1:3,14:17:39.13:768,39,0
chr10	16186944	.	TG	T	6371.43	PASS	AB=0.686;AC=28;AF=0.500;AN=56;BaseQRankSum=14.739;DP=697;FS=1.575;HRun=1;HaplotypeScore=151.9938;InbreedingCoeff=0.4281;MQ=62.04;MQ0=4;MQRankSum=-0.478;QD=13.91;ReadPosRankSum=6.745;VQSLOD=4.3314;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:15,16:30:13.98:342,0,14	0/0:18,0:18:45.27:0,45,481	0/0:19,0:12:24.64:0,25,347	0/0:24,0:21:60.17:0,60,753	0/0:30,0:30:90.07:0,90,911	0/1:10,11:21:6.04:248,0,6	1/1:3,13:16:38.75:359,39,0	0/1:15,8:29:20.53:175,0,21	0/1:15,12:27:11.54:295,0,12	0/0:36,0:36:99:0,108,1113	0/0:18,0:18:45.58:0,46,498	1/1:10,20:30:21.86:458,22,0	1/1:9,14:23:14.11:364,14,0	1/1:11,14:25:12.72:335,13,0	1/1:12,32:44:70.36:845,70,0	1/1:5,18:23:41.39:439,41,0	0/0:23,0:23:51.83:0,52,453	0/1:12,15:27:12.36:319,0,12	0/1:15,6:21:47.66:178,0,48	1/1:8,12:20:4.16:285,4,0	0/1:14,12:26:30.31:274,0,30	1/1:6,14:20:39.95:360,40,0	0/1:15,11:26:22.41:288,0,22	1/1:9,15:24:30.74:414,31,0	1/1:12,13:25:23.94:393,24,0	0/0:24,0:24:72.05:0,72,758	0/0:29,0:29:77.96:0,78,693	0/0:18,0:18:50.95:0,51,453
chr10	16186946	.	TTG	T	6589.51	PASS	AB=0.675;AC=23;AF=0.411;AN=56;BaseQRankSum=14.123;DP=702;FS=0.281;HRun=0;HaplotypeScore=164.8026;InbreedingCoeff=0.0325;MQ=61.51;MQ0=4;MQRankSum=-0.316;QD=14.20;ReadPosRankSum=7.972;VQSLOD=3.9038;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:16,16:31:55.16:383,0,55	0/0:18,0:18:45.81:0,46,652	0/0:18,0:11:25.70:0,26,338	0/0:23,0:20:57.17:0,57,802	0/0:30,0:30:87.28:0,87,1148	0/1:12,11:23:42.33:293,0,42	1/1:4,13:17:30.45:368,30,0	0/1:21,8:29:67.68:227,0,68	0/1:14,12:26:81.16:297,0,81	0/0:37,0:37:99:0,111,1577	0/0:18,0:18:48.83:0,49,678	0/1:11,20:31:17.82:479,0,18	0/1:11,14:25:21.29:383,0,21	0/1:10,14:24:31.37:326,0,31	1/1:12,32:44:22.49:822,22,0	1/1:6,17:24:25.03:457,25,0	0/0:23,0:23:52.98:0,53,698	0/1:12,15:27:64.52:305,0,65	0/1:16,6:22:99:194,0,112	0/1:7,12:19:20.71:283,0,21	0/1:15,12:27:95.81:283,0,96	1/1:6,14:20:34.52:380,35,0	0/1:15,11:26:75.21:316,0,75	1/1:10,14:24:7.43:423,7,0	0/1:11,12:24:14.22:371,0,14	0/0:24,0:24:72.24:0,72,1054	0/0:29,0:29:78.25:0,78,998	0/0:18,0:18:51.16:0,51,655
chr10	16187097	.	CCAT	C	5103.02	PASS	AB=0.997;AC=35;AF=0.625;AN=56;BaseQRankSum=-13.510;DP=630;FS=1.723;HRun=0;HaplotypeScore=164.9239;InbreedingCoeff=-0.3362;MQ=61.57;MQ0=3;MQRankSum=0.035;QD=8.78;ReadPosRankSum=-9.516;VQSLOD=1.8729;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:29:99:238,0,100	1/1:3,5:8:12.04:166,12,0	0/0:17,0:14:7.84:0,8,95	0/0:31,0:28:6.40:0,6,301	1/1:5,8:13:18.05:221,18,0	0/1:25,0:25:99:142,0,118	0/1:35,0:35:99:225,0,121	1/1:34,0:34:27.99:569,28,0	0/1:23,0:23:65.91:66,0,104	1/1:8,11:19:33.07:415,33,0	1/1:4,9:13:14.97:201,15,0	0/1:18,0:18:41.38:103,0,41	0/1:20,0:20:82.20:82,0,99	0/1:21,1:22:77.20:163,0,77	0/1:40,0:40:99:185,0,169	0/1:28,0:28:82.56:121,0,83	1/1:4,21:26:39.10:519,39,0	0/1:22,0:22:44.35:44,0,103	0/1:14,0:13:26.64:27,0,63	0/1:20,0:20:74.61:116,0,75	0/1:51,0:51:89.78:90,0,165	0/1:15,0:15:49.06:103,0,49	0/1:14,0:14:22.14:22,0,69	0/1:19,0:19:51.31:129,0,51	0/1:21,0:21:53.97:102,0,54	1/1:7,10:17:30.04:375,30,0	1/1:4,20:25:39.10:521,39,0	1/1:7,3:10:12.04:156,12,0
chr10	16187184	.	G	GTACA	9303.50	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-0.544;DP=666;FS=4.913;HRun=0;HaplotypeScore=143.4146;InbreedingCoeff=0.9247;MQ=60.14;MQ0=3;MQRankSum=-4.696;QD=20.14;ReadPosRankSum=0.766;VQSLOD=4.5893;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,18:31:30.10:720,30,0	0/0:12,0:12:24.06:0,24,364	0/0:27,0:20:0.03:0,0,100	0/0:24,0:22:21.37:0,21,257	0/0:21,0:21:48.16:0,48,778	1/1:6,0:22:24.08:418,24,0	1/1:16,0:33:23.11:367,23,0	1/1:35,0:35:24.54:376,25,0	1/1:13,0:24:15.05:262,15,0	0/0:26,0:26:48.16:0,48,778	0/0:16,0:16:30.09:0,30,461	1/1:9,10:20:21.07:508,21,0	1/1:12,0:28:32.14:528,32,0	1/1:12,0:19:9.03:157,9,0	1/1:9,26:37:48.16:1158,48,0	1/1:7,26:33:60.21:1454,60,0	0/0:20,0:19:27.09:0,27,438	1/1:5,14:20:26.17:929,26,0	1/1:8,0:14:20.31:258,20,0	1/1:11,0:23:22.14:326,22,0	1/1:20,0:36:11.07:163,11,0	1/1:10,0:21:18.06:313,18,0	1/1:5,1:21:18.94:267,19,0	1/1:5,0:15:9.03:157,9,0	1/1:8,20:29:39.13:944,39,0	0/0:28,0:28:66.23:0,66,1068	0/0:22,0:22:45.13:0,45,698	0/0:5,0:5:12.04:0,12,195
chr10	16187623	.	CG	C	3946.85	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=5.472;DP=516;FS=8.627;HRun=7;HaplotypeScore=66.1439;InbreedingCoeff=0.9108;MQ=68.44;MQ0=0;MQRankSum=0.910;QD=21.93;ReadPosRankSum=4.528;VQSLOD=3.0800;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,102,1265	1/1:3,9:12:27.06:275,27,0	0/1:19,0:17:22.48:22,0,250	0/0:16,0:10:15.01:0,15,103	1/1:4,16:20:39.08:396,39,0	0/0:15,0:15:30.07:0,30,350	0/0:31,0:31:72.19:0,72,857	0/0:16,0:17:33.10:0,33,411	0/0:11,0:11:33.06:0,33,376	1/1:3,21:24:63.14:642,63,0	1/1:7,15:22:48.09:479,48,0	0/0:26,0:26:78.20:0,78,922	0/0:11,0:11:31.87:0,32,340	0/0:11,0:11:33.09:0,33,391	0/0:17,0:17:45.11:0,45,529	0/0:23,0:24:63.14:0,63,729	1/1:1,26:27:63.14:642,63,0	0/0:26,0:26:63.17:0,63,766	0/0:11,0:11:24.08:0,24,302	0/0:11,0:11:27.04:0,27,286	0/0:20,0:20:51.15:0,51,623	0/0:15,0:15:45.14:0,45,564	0/0:15,0:15:42.10:0,42,496	0/0:11,0:11:30.10:0,30,377	0/0:11,0:11:24.05:0,24,277	1/1:3,27:30:81.16:817,81,0	1/1:1,19:20:48.11:489,48,0	1/1:0,6:6:18.04:184,18,0
chr10	16187630	.	GT	G	679.35	PASS	AB=0.974;AC=11;AF=0.196;AN=56;BaseQRankSum=12.495;DP=531;FS=0.818;HRun=1;HaplotypeScore=71.5679;InbreedingCoeff=0.4513;MQ=70.54;MQ0=0;MQRankSum=0.617;QD=4.19;ReadPosRankSum=7.213;VQSLOD=0.3001;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,111,1291	0/1:12,0:12:21.02:35,0,21	0/0:20,0:18:48.55:0,49,496	0/0:17,0:11:23.21:0,23,169	0/1:18,2:20:23.19:143,0,23	0/0:16,0:15:45.04:0,45,489	0/0:24,0:24:69.15:0,69,854	0/0:19,0:19:54.11:0,54,612	0/0:12,0:12:32.74:0,33,319	0/1:24,1:25:40.13:95,0,40	1/1:17,1:18:39.32:165,39,0	0/0:27,0:27:81.16:0,81,913	0/0:12,0:12:32.65:0,33,349	0/0:11,0:11:33.10:0,33,411	0/0:19,0:19:56.98:0,57,620	0/0:23,0:23:66.15:0,66,797	0/1:29,0:28:7.90:170,0,8	0/0:26,0:26:78.03:0,78,905	0/0:10,0:10:27.04:0,27,302	0/0:12,0:12:33.07:0,33,382	0/0:30,0:30:84.01:0,84,897	0/0:17,0:17:45.04:0,45,510	0/0:15,0:15:45.10:0,45,526	0/0:10,0:10:30.08:0,30,370	0/0:11,0:11:30:0,30,324	1/1:28,0:28:24.04:110,24,0	1/1:20,1:21:14.44:107,14,0	0/1:9,0:9:20.87:21,0,48
chr10	16188531	.	GC	G	8774.93	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=13.064;DP=420;FS=19.693;HRun=2;HaplotypeScore=104.4632;InbreedingCoeff=0.9637;MQ=91.04;MQ0=0;MQRankSum=-14.658;QD=33.36;ReadPosRankSum=-1.804;VQSLOD=2.7391;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,22:26:51.17:661,51,0	0/0:11,0:11:33.11:0,33,492	0/0:23,0:23:66.22:0,66,974	0/0:21,0:21:26.51:0,27,756	0/0:17,0:17:51.17:0,51,764	1/1:0,11:11:33.11:428,33,0	1/1:1,17:18:48.16:622,48,0	1/1:2,15:17:51.15:646,51,0	1/1:1,13:14:39.13:505,39,0	0/0:13,0:13:39.13:0,39,574	0/0:13,0:13:39.13:0,39,584	1/1:2,14:16:45.15:583,45,0	1/1:1,15:16:42.14:544,42,0	1/1:0,10:10:30.10:389,30,0	1/1:0,24:24:72.23:933,72,0	1/1:3,13:16:48.11:578,48,0	0/0:24,0:24:72.22:0,72,1053	1/1:3,16:19:3.15:518,3,0	1/1:2,6:8:24.08:311,24,0	1/1:0,17:17:48.16:622,48,0	1/1:4,5:9:12.02:152,12,0	1/1:0,16:16:39.13:505,39,0	1/1:0,4:4:12.04:155,12,0	1/1:2,11:13:21.07:272,21,0	1/1:0,9:9:27.09:350,27,0	0/0:14,0:14:36.12:0,36,538	0/0:14,0:14:42.13:0,42,609	0/0:7,0:7:21.07:0,21,315
chr10	16188538	.	GA	G	7769.34	PASS	AB=0.541;AC=35;AF=0.625;AN=56;BaseQRankSum=12.241;DP=406;FS=19.951;HRun=3;HaplotypeScore=100.2560;InbreedingCoeff=0.8923;MQ=86.14;MQ0=0;MQRankSum=-14.323;QD=30.00;ReadPosRankSum=-1.899;VQSLOD=2.7643;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,26:26:48.15:594,48,0	0/0:11,0:11:33.11:0,33,475	0/0:18,0:18:51.13:0,51,688	0/0:19,0:19:48.16:0,48,685	0/0:17,0:17:51.16:0,51,716	1/1:2,10:12:30.08:358,30,0	1/1:2,17:19:45.14:557,45,0	1/1:0,16:16:48.15:595,48,0	1/1:3,11:14:36.09:431,36,0	0/0:14,0:14:42.13:0,42,590	0/0:14,0:14:42.13:0,42,588	1/1:3,13:16:42.13:519,42,0	1/1:1,12:13:39.12:481,39,0	1/1:1,11:12:27.08:333,27,0	1/1:2,21:23:66.21:816,66,0	1/1:2,14:16:39.11:470,39,0	0/0:22,0:22:63.21:0,63,907	0/1:3,17:20:30.75:525,0,31	1/1:0,9:9:27.08:335,27,0	1/1:1,14:15:42.13:520,42,0	1/1:1,7:8:2.99:37,3,0	1/1:1,13:14:39.11:470,39,0	1/1:0,4:4:12.04:148,12,0	1/1:3,9:12:21.05:247,21,0	1/1:1,9:10:27.08:334,27,0	0/0:13,0:13:39.13:0,39,562	0/0:13,0:13:39.12:0,39,543	0/0:6,0:6:18.06:0,18,259
chr10	16188632	.	T	TGG	2177.71	PASS	AB=0.708;AC=42;AF=0.808;AN=52;BaseQRankSum=-2.116;DP=130;FS=2.728;HRun=4;HaplotypeScore=48.4863;InbreedingCoeff=0.3790;MQ=70.75;MQ0=0;MQRankSum=0.762;QD=19.62;ReadPosRankSum=-1.848;VQSLOD=0.1094;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	0/1:3,1:6:13.02:39,0,13	0/1:2,0:4:0.26:0,0,15	0/1:4,0:5:0.75:28,0,1	0/0:2,0:7:11.15:0,11,73	1/1:4,2:6:9.02:122,9,0	1/1:5,5:10:17.91:244,18,0	1/1:1,2:3:3.01:40,3,0	1/1:4,1:5:11.98:130,12,0	0/1:2,0:4:1.74:2,0,9	1/1:4,0:5:5.17:22,5,0	1/1:3,2:5:9.02:122,9,0	1/1:2,2:5:12.04:157,12,0	1/1:1,4:5:12.04:197,12,0	1/1:1,3:4:12.03:163,12,0	1/1:4,3:7:12.04:186,12,0	1/1:0,0:1:2.50:9,2,0	1/1:6,0:6:5.93:68,6,0	1/1:1,0:1:3:27,3,0	1/1:1,3:6:12.04:186,12,0	1/1:5,0:5:3.01:45,3,0	1/1:1,5:7:15.05:229,15,0	1/1:2,1:3:6.02:92,6,0	./.	1/1:2,5:7:14.91:193,15,0	0/0:1,0:3:4.59:0,5,15	0/0:3,0:5:6.71:0,7,23	1/1:0,0:1:2.88:15,3,0
chr10	16188658	.	GT	G	972.58	PASS	AB=1.000;AC=37;AF=0.685;AN=54;BaseQRankSum=4.632;DP=136;FS=1.066;HRun=1;HaplotypeScore=50.9052;InbreedingCoeff=0.0690;MQ=66.43;MQ0=0;MQRankSum=-3.316;QD=8.04;ReadPosRankSum=6.556;VQSLOD=0.8877;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:5:1.84:0,2,16	1/1:3,1:4:9.81:70,10,0	0/0:5,0:5:8.93:0,9,94	0/1:6,0:6:5.12:5,0,16	1/1:4,1:5:8.89:59,9,0	1/1:6,0:6:16.95:87,17,0	0/1:6,0:6:6.24:38,0,6	0/1:7,0:7:30.26:30,0,33	0/1:6,0:6:13.88:37,0,14	1/1:2,0:2:5.82:33,6,0	0/0:3,0:3:2.98:0,3,22	1/1:6,0:6:14.21:77,14,0	1/1:4,2:6:12:97,12,0	0/1:5,0:5:4.90:28,0,5	1/1:5,0:5:14.48:86,14,0	0/1:8,0:8:23.66:42,0,24	1/1:1,0:1:2.88:15,3,0	1/1:4,0:4:8.56:43,9,0	0/1:4,0:4:10.61:11,0,34	1/1:2,0:2:5.87:35,6,0	0/0:2,0:2:0.89:0,1,2	1/1:11,0:11:24.93:133,25,0	1/1:4,0:4:7.49:33,7,0	1/1:3,0:3:0.89:2,1,0	0/1:9,0:9:7.17:63,0,7	0/1:6,0:6:9.41:55,0,9	1/1:5,0:5:8.90:43,9,0	./.
chr10	16188751	.	C	CGAGAAGCACA	20626.53	PASS	AB=1.000;AC=42;AF=0.750;AN=56;BaseQRankSum=-0.826;DP=392;FS=13.369;HRun=0;HaplotypeScore=148.4174;InbreedingCoeff=0.4134;MQ=78.65;MQ0=0;MQRankSum=-12.802;QD=63.08;ReadPosRankSum=0.715;VQSLOD=4.2494;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:12,7:19:45.43:1429,45,0	0/1:3,0:3:15.97:16,0,133	0/0:20,0:20:53.33:0,53,1498	0/0:18,0:18:50.76:0,51,1132	0/0:12,0:12:8.11:0,8,651	1/1:6,8:14:41.81:1682,42,0	1/1:15,7:22:12.30:1810,12,0	1/1:25,2:27:38.17:2035,38,0	1/1:14,6:20:26.70:1263,27,0	0/1:18,0:18:38.21:38,0,757	0/1:8,0:8:25.86:26,0,401	1/1:7,9:16:47.50:1727,48,0	1/1:5,6:11:32.61:1123,33,0	1/1:13,8:21:23.45:1632,23,0	1/1:5,6:11:32.52:1094,33,0	1/1:8,9:17:47.64:1436,48,0	0/1:22,0:22:52.28:52,0,1071	1/1:6,4:10:30.02:964,30,0	1/1:10,0:10:27.06:675,27,0	1/1:4,1:5:12.91:323,13,0	1/1:18,2:20:12.67:595,13,0	1/1:9,3:12:9.40:693,9,0	1/1:5,0:5:3.65:74,4,0	1/1:8,3:11:12.04:513,12,0	1/1:7,8:15:39.11:1412,39,0	0/0:15,0:15:42.09:0,42,922	0/1:6,0:5:6.99:7,0,298	0/1:4,0:4:6.99:7,0,155
chr10	16191190	.	A	ATTT	12955.97	PASS	AB=0.557;AC=49;AF=0.875;AN=56;BaseQRankSum=-4.368;DP=613;FS=8.795;HRun=10;HaplotypeScore=96.9405;InbreedingCoeff=0.4786;MQ=69.41;MQ0=1;MQRankSum=-3.552;QD=22.45;ReadPosRankSum=2.387;VQSLOD=2.7614;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,41:49:99:1944,102,0	1/1:1,0:9:12.60:45,13,0	0/0:18,0:17:19.54:0,20,268	0/0:16,0:13:6.26:0,6,131	0/1:4,0:24:6.32:45,0,6	1/1:9,12:23:33.09:558,33,0	1/1:4,15:21:45.09:775,45,0	1/1:11,18:32:63.22:1166,63,0	1/1:6,10:18:24.06:424,24,0	1/1:5,0:26:27.56:83,28,0	1/1:5,0:22:20.43:63,20,0	1/1:8,12:23:33.09:581,33,0	1/1:4,16:22:29.94:557,30,0	1/1:8,19:27:51.17:971,51,0	1/1:7,11:18:27.09:504,27,0	1/1:2,12:15:30.10:577,30,0	1/1:4,0:34:35.38:98,35,0	1/1:10,15:25:42.14:784,42,0	1/1:7,9:17:29.58:528,30,0	1/1:7,13:22:48.16:820,48,0	1/1:5,10:17:24.02:352,24,0	1/1:2,12:16:30.06:519,30,0	1/1:5,6:12:18.04:310,18,0	1/1:4,15:20:36.10:653,36,0	1/1:7,15:24:29.66:507,30,0	0/1:5,0:19:17.28:19,0,17	1/1:5,0:22:15.84:37,16,0	0/1:3,0:17:15.54:37,0,16
chr10	16193205	.	A	AT	6831.53	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-4.032;DP=508;FS=23.552;HRun=2;HaplotypeScore=68.5289;InbreedingCoeff=0.6407;MQ=65.17;MQ0=1;MQRankSum=0.156;QD=14.06;ReadPosRankSum=3.041;VQSLOD=2.8061;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:26:17.73:99,18,0	1/1:0,7:7:11.95:143,12,0	0/0:12,0:9:22.95:0,23,195	0/0:10,0:7:10.95:0,11,108	1/1:0,26:26:71.73:857,72,0	1/1:26,0:26:5.88:148,6,0	1/1:13,0:13:9.61:27,10,0	1/1:34,0:34:9.16:191,9,0	1/1:15,0:15:11.47:48,11,0	1/1:0,29:29:84.09:991,84,0	1/1:0,14:14:42.03:543,42,0	1/1:15,0:15:20.33:97,20,0	1/1:16,0:16:16.83:99,17,0	1/1:19,0:19:8.03:26,8,0	1/1:12,0:12:2.82:31,3,0	1/1:20,0:20:18.05:123,18,0	1/1:1,36:37:93.31:1304,93,0	1/1:20,1:20:14.66:134,15,0	1/1:27,0:26:34.41:190,34,0	1/1:24,0:24:14.35:122,14,0	1/1:8,0:8:5.68:16,6,0	1/1:9,0:9:9.86:61,10,0	1/1:11,0:11:10.59:82,11,0	1/1:14,0:14:11.01:45,11,0	1/1:14,0:14:9.26:44,9,0	1/1:1,27:28:60.37:945,60,0	1/1:0,13:15:24:296,24,0	1/1:0,6:6:12.04:168,12,0
chr10	16193935	.	C	CGG	5100.97	PASS	AB=0.578;AC=50;AF=0.893;AN=56;BaseQRankSum=-0.827;DP=505;FS=19.250;HRun=7;HaplotypeScore=87.4344;InbreedingCoeff=0.6217;MQ=75.35;MQ0=0;MQRankSum=-5.536;QD=10.54;ReadPosRankSum=3.021;VQSLOD=1.2000;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:32:62.38:220,62,0	1/1:1,8:10:15.01:217,15,0	0/0:10,0:10:19.17:0,19,232	0/0:11,0:11:24.97:0,25,307	1/1:3,0:9:16.79:58,17,0	1/1:3,0:17:29.94:106,30,0	1/1:3,0:25:52.40:185,52,0	1/1:13,0:25:26:132,26,0	0/1:5,0:18:35.80:63,0,36	1/1:5,10:14:30.07:440,30,0	1/1:7,6:13:15.05:241,15,0	1/1:3,0:22:37.78:133,38,0	1/1:4,0:15:19.96:71,20,0	1/1:1,0:23:37.90:133,38,0	1/1:4,0:27:15.19:130,15,0	1/1:0,0:12:24.95:88,25,0	1/1:2,26:30:54.14:827,54,0	1/1:3,0:22:10.48:115,10,0	1/1:3,0:12:20.97:104,21,0	1/1:2,0:13:25.90:110,26,0	1/1:3,0:27:54.77:192,55,0	0/1:5,0:19:4.75:65,0,5	1/1:9,0:25:32.74:123,33,0	1/1:1,0:12:24.95:88,25,0	1/1:4,0:23:44.92:158,45,0	1/1:4,12:17:32.57:474,33,0	1/1:1,12:15:29.25:447,29,0	1/1:1,3:5:14.52:181,15,0
chr10	16194278	.	GA	G	5335.99	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=19.162;DP=786;FS=9.257;HRun=7;HaplotypeScore=109.2240;InbreedingCoeff=0.9971;MQ=77.34;MQ0=0;MQRankSum=-9.368;QD=25.41;ReadPosRankSum=-1.034;VQSLOD=3.7516;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,126,1571	1/1:5,11:16:42.04:410,42,0	0/0:23,0:23:54.02:0,54,610	0/0:14,0:14:36.06:0,36,404	1/1:11,16:27:63.13:635,63,0	0/0:11,0:11:27.09:0,27,340	0/0:26,0:26:75.24:0,75,942	0/0:35,0:35:96.28:0,96,1175	0/0:21,0:21:54.17:0,54,679	1/1:16,19:35:87.17:876,87,0	1/1:10,15:25:66.10:657,66,0	0/0:32,1:33:59.67:0,60,1063	0/0:33,0:33:96.29:0,96,1183	0/0:27,0:27:75.24:0,75,943	0/0:32,0:32:96.28:0,96,1180	0/0:38,0:38:99:0,108,1358	1/1:19,11:30:68.91:670,69,0	0/0:37,0:37:99:0,99,1195	0/0:20,0:20:51.15:0,51,620	0/0:23,0:23:63.20:0,63,792	0/0:41,0:41:99:0,123,1534	0/0:30,0:30:84.21:0,84,1016	0/0:31,0:31:93.30:0,93,1170	0/0:28,0:27:78.24:0,78,969	0/0:27,0:27:78.25:0,78,981	1/1:14,16:30:84.16:843,84,0	1/1:21,19:40:99:1091,108,0	1/1:2,5:7:15.03:152,15,0
chr10	16194290	.	C	CA	7823.13	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=14.407;DP=795;FS=18.617;HRun=2;HaplotypeScore=102.5962;InbreedingCoeff=0.9995;MQ=76.62;MQ0=0;MQRankSum=-7.874;QD=35.56;ReadPosRankSum=-0.869;VQSLOD=2.8124;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,132,1607	1/1:6,11:17:42.13:581,42,0	0/0:23,0:23:43.92:0,44,543	0/0:13,0:13:36.10:0,36,434	1/1:11,15:26:57.19:817,57,0	0/0:11,0:11:30.07:0,30,358	0/0:27,0:27:81.23:0,81,979	0/0:36,0:36:99:0,108,1301	0/0:20,0:20:60.18:0,60,731	1/1:11,26:37:99:1538,108,0	1/1:12,15:27:60.12:814,60,0	0/0:33,0:33:93.26:0,93,1126	0/0:35,0:35:99:0,102,1264	0/0:26,0:26:75.22:0,75,917	0/0:35,0:35:99:0,105,1278	0/0:37,0:37:99:0,108,1316	1/1:20,9:29:57.17:784,57,0	0/0:35,0:35:99:0,99,1210	0/0:18,0:18:54.17:0,54,668	0/0:21,0:21:60.19:0,60,743	0/0:44,0:44:99:0,126,1548	0/0:31,0:31:93.29:0,93,1152	0/0:32,0:32:84.24:0,84,1016	0/0:31,0:30:90.24:0,90,1075	0/0:23,0:23:66.19:0,66,805	1/1:15,21:36:99:1420,99,0	1/1:18,20:36:99:1547,111,0	1/1:3,7:10:24.07:321,24,0
chr10	16195238	.	G	GT	19998.46	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-19.441;DP=734;FS=1.712;HRun=2;HaplotypeScore=73.0177;InbreedingCoeff=0.9840;MQ=77.54;MQ0=0;MQRankSum=-1.425;QD=38.83;ReadPosRankSum=0.113;VQSLOD=5.2648;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,33:33:90.30:1296,90,0	0/0:12,0:12:36.11:0,36,446	0/0:9,0:9:24.08:0,24,298	0/0:21,0:21:50.71:0,51,552	0/0:37,0:37:99:0,108,1339	1/1:0,21:21:57.19:821,57,0	1/1:3,25:28:72.24:1037,72,0	1/1:3,35:38:99:1511,105,0	1/1:1,31:32:90.30:1296,90,0	0/0:37,0:37:99:0,102,1245	0/0:20,0:20:57.18:0,57,706	1/1:2,32:34:78.26:1123,78,0	1/1:1,31:33:84.28:1207,84,0	1/1:0,17:17:42.14:605,42,0	1/1:1,30:31:87.29:1253,87,0	1/1:0,25:25:72.24:1037,72,0	0/0:25,0:25:75.20:0,75,903	1/1:0,26:26:75.25:1080,75,0	1/1:3,20:23:63.21:907,63,0	1/1:0,31:31:90.30:1296,90,0	1/1:0,43:43:99:1685,117,0	1/1:0,25:25:72.24:1037,72,0	1/1:0,20:20:51.17:734,51,0	1/1:0,30:30:75.25:1080,75,0	1/1:0,25:25:69.23:994,69,0	0/0:26,0:26:74.79:0,75,907	0/0:30,0:30:81.22:0,81,976	0/0:2,0:2:6.02:0,6,74
chr10	16196371	.	CA	C	8370.19	PASS	AB=0.708;AC=52;AF=0.929;AN=56;BaseQRankSum=-2.843;DP=619;FS=20.907;HRun=11;HaplotypeScore=78.8493;InbreedingCoeff=0.5070;MQ=73.02;MQ0=2;MQRankSum=-4.344;QD=13.86;ReadPosRankSum=1.843;VQSLOD=3.3791;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,2:42:65.06:220,65,0	0/1:2,9:11:2.02:192,0,2	0/0:15,0:14:18:0,18,170	0/1:11,1:11:3.42:3,0,130	1/1:4,14:18:6.95:263,7,0	1/1:4,21:25:30.93:461,31,0	1/1:4,16:20:39.41:321,39,0	1/1:7,29:36:71.87:591,72,0	1/1:2,13:17:43.03:332,43,0	1/1:3,15:18:47.94:393,48,0	1/1:3,11:14:26.94:222,27,0	1/1:1,0:23:44.82:129,45,0	1/1:1,21:22:59.92:492,60,0	1/1:2,14:17:43.99:351,44,0	1/1:6,0:35:52.45:152,52,0	1/1:3,0:26:42.77:124,43,0	1/1:5,39:44:78.89:855,79,0	1/1:3,0:31:30.65:120,31,0	1/1:5,8:16:4.03:200,4,0	1/1:2,21:23:21.90:387,22,0	1/1:10,28:40:81.96:652,82,0	1/1:2,13:15:35.93:296,36,0	1/1:1,8:9:17.85:148,18,0	1/1:2,22:25:58.97:474,59,0	1/1:1,0:14:20.37:59,20,0	1/1:4,17:21:44.91:369,45,0	1/1:2,23:25:65.92:542,66,0	1/1:0,2:2:3:25,3,0
chr10	16200737	.	A	AGC	1632.55	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=6.637;DP=620;FS=0.944;HRun=0;HaplotypeScore=97.3428;InbreedingCoeff=0.8898;MQ=66.53;MQ0=14;MQRankSum=-0.189;QD=10.02;ReadPosRankSum=-2.535;VQSLOD=2.7623;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:29:64.20:516,64,0	0/0:7,0:7:13.69:0,14,121	0/0:36,0:23:56.96:0,57,584	0/0:43,0:29:78.03:0,78,809	0/0:16,0:15:14.38:0,14,202	0/0:16,0:16:9.09:0,9,189	0/0:24,0:28:39.41:0,39,416	0/0:20,0:20:56.98:0,57,509	0/0:14,0:14:10.73:0,11,119	0/0:19,0:19:2.07:0,2,238	0/0:12,0:12:19.66:0,20,206	1/1:7,28:35:11.78:205,12,0	0/0:12,0:13:23.96:0,24,200	0/0:24,0:24:26.24:0,26,354	1/1:20,0:20:8.44:83,8,0	1/1:21,4:25:13.77:291,14,0	0/0:25,0:25:15.53:0,16,366	1/1:25,0:25:38.91:450,39,0	0/0:9,0:9:22.48:0,22,178	0/0:16,0:16:27.81:0,28,232	0/0:35,0:36:59.94:0,60,516	0/0:19,0:19:40.91:0,41,342	0/0:13,0:15:17.22:0,17,129	0/0:33,0:33:43.30:0,43,392	1/1:17,0:20:31.58:247,32,0	0/0:20,0:20:25.94:0,26,359	0/0:22,0:21:16.45:0,16,264	1/1:4,0:5:5.93:27,6,0
chr10	16200738	.	G	GCGCACACA	3080.43	PASS	AB=0.950;AC=23;AF=0.411;AN=56;BaseQRankSum=5.001;DP=702;FS=1.375;HRun=0;HaplotypeScore=178.6642;InbreedingCoeff=-0.0218;MQ=63.97;MQ0=14;MQRankSum=-0.973;QD=6.80;ReadPosRankSum=-3.838;VQSLOD=1.8048;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:36,0:34:68.59:715,69,0	0/0:7,0:10:6.82:0,7,113	0/0:36,0:23:57.32:0,57,585	0/0:43,0:29:78.03:0,78,809	0/1:18,0:17:37.44:37,0,122	0/1:18,0:17:75.10:75,0,176	0/1:35,0:35:99:156,0,370	0/0:23,0:23:37.13:0,37,486	0/1:17,0:16:31.66:32,0,108	0/1:20,0:20:99:110,0,228	0/1:13,0:12:36.55:37,0,180	1/1:36,0:37:6.47:184,6,0	0/1:18,0:15:99:126,0,167	0/0:21,0:32:34.13:0,34,386	1/1:1,18:23:8.44:273,8,0	0/1:13,0:29:41.32:128,0,41	0/0:20,0:31:30.99:0,31,427	0/1:30,0:30:7.87:726,0,8	0/0:9,0:9:20.83:0,21,153	0/0:17,0:17:6.78:0,7,211	0/1:44,0:40:51.84:52,0,424	0/0:24,0:23:16.63:0,17,273	0/1:19,0:18:65.65:66,0,84	0/1:27,0:43:34.22:34,0,348	1/1:21,0:20:32.46:398,32,0	0/1:24,0:24:90.98:91,0,333	0/0:15,0:23:30.79:0,31,307	1/1:2,0:5:3.92:19,4,0
chr10	16201594	.	C	CAAAAA	17626.56	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-4.009;DP=591;FS=17.603;HRun=11;HaplotypeScore=109.8107;InbreedingCoeff=0.8641;MQ=60.18;MQ0=4;MQRankSum=-4.186;QD=31.25;ReadPosRankSum=2.396;VQSLOD=1.8505;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,10:18:27.09:728,27,0	1/1:1,1:3:6.02:134,6,0	0/0:12,0:7:13.51:0,14,95	0/0:13,0:13:10.66:0,11,203	1/1:13,14:30:57.15:1159,57,0	1/1:6,0:27:39.13:657,39,0	1/1:7,1:19:30.10:505,30,0	1/1:18,0:29:48.13:716,48,0	1/1:5,9:15:15.05:411,15,0	1/1:17,13:33:63.21:1385,63,0	1/1:2,9:14:27.09:649,27,0	1/1:6,20:30:36.12:922,36,0	1/1:10,0:28:33.07:526,33,0	1/1:7,1:20:21.07:382,21,0	1/1:10,22:33:54.18:1337,54,0	1/1:5,13:21:33.11:825,33,0	1/1:7,1:17:18.04:322,18,0	1/1:3,0:21:33.01:495,33,0	1/1:9,1:14:20.72:237,21,0	1/1:5,1:17:39.13:660,39,0	1/1:4,0:16:18.06:307,18,0	1/1:9,2:18:33.11:626,33,0	1/1:5,0:17:24.08:399,24,0	1/1:7,0:14:9.03:154,9,0	1/1:4,14:20:27.09:708,27,0	1/1:15,21:39:92.04:1918,92,0	1/1:7,20:30:39.13:987,39,0	1/1:3,11:15:18.06:480,18,0
chr10	16202342	.	TGGG	T	15376.76	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-7.286;DP=702;FS=14.729;HRun=11;HaplotypeScore=99.5690;InbreedingCoeff=0.9843;MQ=63.63;MQ0=25;MQRankSum=-0.298;QD=28.53;ReadPosRankSum=5.774;VQSLOD=2.1847;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,23:27:54.17:708,54,0	1/1:1,6:7:18.06:237,18,0	0/0:64,0:16:28.90:0,29,395	0/0:97,0:23:28.27:0,28,338	1/1:4,20:24:54.12:686,54,0	1/1:2,10:11:24.08:315,24,0	1/1:1,14:15:33.05:414,33,0	1/1:10,17:27:51.05:667,51,0	1/1:6,11:18:36.01:452,36,0	1/1:5,27:32:78.22:1025,78,0	1/1:3,12:15:33.01:393,33,0	1/1:5,22:27:54.16:708,54,0	1/1:2,11:13:30.09:394,30,0	1/1:4,18:22:45.11:591,45,0	1/1:2,25:27:69.21:905,69,0	1/1:4,16:20:42.12:552,42,0	1/1:3,23:26:60.19:783,60,0	1/1:6,33:39:81.23:1057,81,0	1/1:4,15:18:36.09:470,36,0	1/1:4,17:21:51.10:651,51,0	1/1:1,16:17:39.11:512,39,0	1/1:3,22:25:60.09:749,60,0	1/1:2,9:11:24.06:315,24,0	1/1:4,19:23:42.12:552,42,0	1/1:3,17:21:48.15:629,48,0	1/1:4,17:22:49.70:665,50,0	1/1:1,20:21:57.18:749,57,0	1/1:2,6:8:15.05:197,15,0
chr10	16202351	.	GGGT	G	5809.55	PASS	AB=0.997;AC=44;AF=0.786;AN=56;BaseQRankSum=4.376;DP=654;FS=20.628;HRun=0;HaplotypeScore=126.4708;InbreedingCoeff=0.1428;MQ=65.54;MQ0=17;MQRankSum=-1.027;QD=11.37;ReadPosRankSum=12.519;VQSLOD=1.9250;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:26,1:27:35.18:329,35,0	1/1:7,0:7:1.98:68,2,0	0/0:59,0:21:28.33:0,28,521	0/0:83,0:18:39.79:0,40,435	1/1:22,1:23:5.95:240,6,0	0/1:12,0:12:22.68:103,0,23	1/1:15,0:15:6.90:139,7,0	0/1:24,0:24:99:197,0,119	1/1:12,0:12:31.41:180,31,0	1/1:29,0:29:47.38:367,47,0	1/1:12,1:13:10.10:191,10,0	1/1:24,1:25:6.31:304,6,0	0/1:13,0:13:18.73:165,0,19	1/1:19,0:19:25.69:254,26,0	1/1:27,1:27:23.13:366,23,0	1/1:17,0:17:33.89:222,34,0	1/1:25,0:25:39.88:318,40,0	0/1:37,1:38:1.83:391,0,2	0/1:20,0:20:75.63:167,0,76	1/1:20,1:21:21.79:244,22,0	1/1:19,0:19:13.40:182,13,0	1/1:22,0:22:52.22:285,52,0	0/1:11,0:11:0.96:109,0,1	0/1:21,0:21:3.07:170,0,3	1/1:20,0:20:6.32:250,6,0	1/1:19,0:19:16.56:229,17,0	0/1:25,0:25:53.39:269,0,53	1/1:6,0:6:14.12:73,14,0
chr10	16203726	.	TC	T	1955.65	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=13.928;DP=549;FS=3.194;HRun=1;HaplotypeScore=100.9557;InbreedingCoeff=0.9888;MQ=97.91;MQ0=0;MQRankSum=-12.799;QD=20.37;ReadPosRankSum=1.895;VQSLOD=4.0289;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,117,1867	1/1:0,4:4:11.98:101,12,0	0/0:32,0:32:96.31:0,96,1473	0/0:31,0:31:43.76:0,44,1128	1/1:2,14:16:32.41:250,32,0	0/0:21,0:21:63.20:0,63,984	0/0:18,0:18:52.98:0,53,797	0/0:14,0:14:39.13:0,39,623	0/0:18,0:18:54.17:0,54,838	1/1:0,10:10:29.83:261,30,0	1/1:1,14:15:44.87:374,45,0	0/0:31,0:31:93.32:0,93,1485	0/0:26,0:26:78.27:0,78,1245	0/0:26,0:26:78.25:0,78,1222	0/0:26,0:26:78.25:0,78,1221	0/0:20,0:20:60.19:0,60,937	1/1:1,20:21:47.89:451,48,0	0/0:30,0:30:87.25:0,87,1340	0/0:20,0:20:60.20:0,60,939	0/0:11,0:11:33.11:0,33,520	0/0:30,0:30:87.30:0,87,1391	0/0:12,0:12:36.11:0,36,552	0/0:10,0:10:30.10:0,30,471	0/0:28,0:28:78.27:0,78,1234	0/0:9,0:9:24.06:0,24,359	1/1:1,11:12:35.23:315,35,0	1/1:1,13:14:35.98:310,36,0	1/1:0,4:4:11.98:100,12,0
chr10	16203730	.	GACCTTCT	G	5260.99	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=14.359;DP=535;FS=0.000;HRun=0;HaplotypeScore=153.0700;InbreedingCoeff=0.9881;MQ=96.46;MQ0=0;MQRankSum=-13.708;QD=56.57;ReadPosRankSum=1.526;VQSLOD=4.6973;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,117,4716	1/1:0,4:4:12.04:257,12,0	0/0:30,0:30:90.31:0,90,3461	0/0:31,0:31:85.89:0,86,2830	1/1:1,14:15:20.54:645,21,0	0/0:20,0:20:60.21:0,60,2414	0/0:21,0:21:63.20:0,63,2429	0/0:13,0:13:36.12:0,36,1391	0/0:18,0:18:54.19:0,54,2212	1/1:1,9:12:33.09:671,33,0	1/1:1,14:15:45.15:952,45,0	0/0:30,0:30:90.30:0,90,3669	0/0:26,0:26:78.27:0,78,3055	0/0:26,0:26:78.27:0,78,3265	0/0:24,0:24:72.25:0,72,2883	0/0:20,0:20:60.21:0,60,2427	1/1:0,20:20:54.79:1110,55,0	0/0:27,0:27:81.28:0,81,3351	0/0:22,0:22:66.23:0,66,2541	0/0:10,0:10:30.10:0,30,1220	0/0:29,0:29:87.30:0,87,3503	0/0:11,0:11:33.11:0,33,1379	0/0:10,0:10:27.09:0,27,1113	0/0:26,0:26:69.24:0,69,2790	0/0:8,0:8:24.06:0,24,888	1/1:1,9:10:29.46:602,29,0	1/1:0,13:13:39.12:767,39,0	1/1:0,4:4:12.04:256,12,0
chr10	16206760	.	GT	G	6609.42	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=14.694;DP=832;FS=0.966;HRun=4;HaplotypeScore=81.1942;InbreedingCoeff=0.9993;MQ=84.27;MQ0=0;MQRankSum=0.237;QD=33.89;ReadPosRankSum=1.467;VQSLOD=5.3640;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:56:99:0,156,2149	1/1:0,7:7:21.06:252,21,0	0/0:25,0:25:69.20:0,69,911	0/0:28,0:28:75.24:0,75,1021	1/1:1,25:26:69.21:820,69,0	0/0:20,0:20:60.20:0,60,838	0/0:36,0:36:99:0,108,1457	0/0:30,0:30:87.28:0,87,1202	0/0:25,0:25:72.24:0,72,1008	1/1:1,37:38:99:1295,108,0	1/1:1,21:22:63.19:756,63,0	0/0:36,0:36:99:0,105,1470	0/0:45,0:45:99:0,126,1745	0/0:39,0:39:99:0,114,1567	0/0:44,0:44:99:0,132,1830	0/0:35,0:35:99:0,102,1424	1/1:1,31:32:87.27:1044,87,0	0/0:18,0:18:51.17:0,51,709	0/0:26,0:25:63.20:0,63,867	0/0:21,0:21:63.21:0,63,882	0/0:46,0:46:99:0,126,1712	0/0:35,0:35:93.31:0,93,1293	0/0:18,0:18:48.16:0,48,672	0/0:29,0:28:84.27:0,84,1155	0/0:24,0:24:72.22:0,72,975	1/1:1,30:31:93.28:1111,93,0	1/1:1,23:24:66.20:792,66,0	1/1:0,15:15:45.14:540,45,0
chr10	16207623	.	ATC	A	2608.47	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=-5.134;DP=753;FS=0.000;HRun=0;HaplotypeScore=117.0658;InbreedingCoeff=-0.0105;MQ=60.42;MQ0=27;MQRankSum=2.565;QD=5.45;ReadPosRankSum=0.399;VQSLOD=3.0935;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,20:23:3.01:37,3,0	0/0:13,0:13:22.97:0,23,199	0/0:51,0:17:6.09:0,6,160	0/0:59,0:25:17.94:0,18,148	0/0:12,0:12:11.98:0,12,99	0/1:26,0:26:58.57:148,0,59	0/1:14,0:14:47.30:93,0,47	0/1:37,0:34:31.87:205,0,32	0/1:33,0:33:89.97:202,0,90	0/1:33,0:32:18.16:18,0,427	0/0:12,0:12:17.71:0,18,152	1/1:27,4:31:25.99:333,26,0	0/1:29,0:29:93.75:94,0,113	0/1:19,0:19:88.28:95,0,88	0/0:9,19:28:2.22:0,2,7	1/1:8,22:30:14.67:149,15,0	0/0:29,0:28:21.07:0,21,294	1/1:15,0:15:37.94:330,38,0	0/1:22,0:19:22.99:215,0,23	0/1:14,0:14:4.41:85,0,4	0/1:46,0:46:80.10:158,0,80	0/1:27,0:26:65.45:82,0,65	0/1:12,0:12:53.82:54,0,57	0/1:32,0:31:75.15:198,0,75	1/1:34,0:35:38.18:291,38,0	0/0:44,0:44:84.06:0,84,729	0/0:18,0:17:28.58:0,29,227	0/0:8,0:8:8.98:0,9,90
chr10	16207638	.	TCTCA	T	1913.19	PASS	AB=0.995;AC=19;AF=0.339;AN=56;BaseQRankSum=-5.805;DP=646;FS=3.737;HRun=0;HaplotypeScore=130.2483;InbreedingCoeff=-0.3449;MQ=51.77;MQ0=37;MQRankSum=2.367;QD=4.27;ReadPosRankSum=-4.011;VQSLOD=0.6758;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:26:3.19:4,0,3	0/0:12,0:12:17.05:0,17,192	0/0:26,0:10:6.30:0,6,162	0/0:30,0:9:17.94:0,18,149	0/0:11,0:10:11.98:0,12,99	0/1:21,0:21:99:131,0,155	0/1:19,0:18:82.95:90,0,83	0/1:23,0:20:79.26:180,0,79	0/1:31,0:30:99:182,0,149	0/1:28,0:27:26.60:27,0,459	0/0:13,0:13:17.71:0,18,155	0/1:28,0:28:24.32:142,0,24	0/1:24,0:24:82.18:82,0,202	0/1:21,0:20:56.91:57,0,142	0/0:24,0:24:4.72:0,5,16	0/1:32,1:32:36.90:90,0,37	0/0:25,0:23:21.51:0,22,331	0/1:17,0:17:87.93:134,0,88	0/1:21,0:18:96.08:96,0,162	0/1:13,0:11:31.22:77,0,31	0/1:40,0:38:84.52:85,0,253	0/1:21,0:20:60.10:60,0,64	0/1:15,0:14:46.52:47,0,139	0/1:34,0:32:99:146,0,193	1/1:24,7:31:39.99:449,40,0	0/0:37,0:37:82.30:0,82,774	0/0:15,0:14:28.40:0,28,227	0/0:3,0:3:8.98:0,9,93
chr10	16207661	.	CAT	C	2692.86	PASS	AB=0.985;AC=34;AF=0.654;AN=52;BaseQRankSum=-2.106;DP=575;FS=10.990;HRun=0;HaplotypeScore=117.4887;InbreedingCoeff=-0.2023;MQ=45.21;MQ0=26;MQRankSum=-0.349;QD=4.89;ReadPosRankSum=-0.592;VQSLOD=2.0521;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:31,0:28:9.23:139,9,0	1/1:8,0:8:11.97:96,12,0	./.	./.	1/1:10,0:8:2.99:24,3,0	0/1:21,0:21:3.30:3,0,173	0/1:20,0:17:2.36:2,0,156	0/1:20,0:18:25.08:25,0,74	0/1:27,0:26:60.04:60,0,173	1/1:22,0:22:58.35:415,58,0	1/1:11,0:10:5.98:48,6,0	0/1:23,0:23:3.53:166,0,4	0/1:24,0:24:31.76:32,0,133	0/0:19,2:20:29.50:0,30,221	1/1:25,0:25:15.52:104,16,0	1/1:34,0:33:3.57:242,4,0	1/1:24,0:20:26.80:209,27,0	0/1:19,0:18:80.68:81,0,103	0/1:16,4:18:28.67:29,0,255	0/1:14,0:12:38.34:81,0,38	0/1:50,0:46:99:129,0,269	0/1:23,0:21:91.84:101,0,92	0/1:15,0:13:29.67:30,0,85	0/1:43,0:41:99:117,0,260	0/1:22,1:23:7.28:100,0,7	1/1:31,0:30:62.14:500,62,0	1/1:13,0:12:8.01:114,8,0	0/0:3,0:2:0.89:0,1,2
chr10	16207663	.	TACACAC	T	1266.67	PASS	AB=1.000;AC=14;AF=0.304;AN=46;BaseQRankSum=0.577;DP=572;FS=1.484;HRun=0;HaplotypeScore=153.3963;InbreedingCoeff=0.6178;MQ=45.33;MQ0=26;MQRankSum=2.178;QD=6.56;ReadPosRankSum=-0.141;VQSLOD=2.7126;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:29,1:27:12.96:120,13,0	1/1:8,0:8:1.94:36,2,0	./.	./.	./.	0/0:23,0:23:24.07:0,24,488	0/0:20,0:17:7.84:0,8,200	0/0:19,0:16:10.05:0,10,65	0/0:27,0:26:9.50:0,10,200	./.	0/0:11,0:10:0:0,0,0	1/1:20,1:23:27.04:257,27,0	0/0:25,0:25:32.27:0,32,522	0/0:21,0:20:8.97:0,9,268	1/1:25,1:26:18.12:262,18,0	1/1:33,1:33:34.52:525,35,0	0/0:24,0:20:0.46:0,0,1	0/1:19,0:18:11.92:145,0,12	0/0:19,0:17:25.96:0,26,502	0/0:14,0:12:9.03:0,9,236	0/0:48,0:44:36.59:0,37,631	0/0:24,0:22:25.16:0,25,364	0/0:16,0:14:20.53:0,21,336	0/0:41,0:39:52.61:0,53,865	1/1:19,4:23:8.87:51,9,0	0/1:30,0:29:28.09:28,0,41	0/0:13,0:12:0:0,0,0	./.
chr10	16207703	.	C	CG	31.33	PASS	AB=0.982;AC=8;AF=0.143;AN=56;BaseQRankSum=5.307;DP=618;FS=0.000;HRun=0;HaplotypeScore=107.4449;InbreedingCoeff=0.2530;MQ=56.54;MQ0=30;MQRankSum=0.002;QD=0.56;ReadPosRankSum=-3.593;VQSLOD=1.0377;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:25:57.19:0,57,772	0/1:4,0:4:3.97:4,0,19	0/0:37,0:17:47.45:0,47,595	0/0:40,0:17:35.05:0,35,495	1/1:5,2:6:2.60:11,3,0	0/0:27,0:26:60.19:0,60,808	0/0:23,0:21:42.13:0,42,565	0/0:24,0:24:64.23:0,64,812	0/0:20,0:20:51.17:0,51,695	0/1:8,0:7:41.08:49,0,41	0/1:3,0:2:0:1,0,0	0/0:28,0:28:69.02:0,69,873	0/0:31,0:31:72.21:0,72,944	0/0:26,0:24:47.99:0,48,661	0/0:23,0:23:63.05:0,63,778	0/0:27,0:27:71.98:0,72,875	0/1:14,0:13:10.16:40,0,10	0/0:14,0:14:36.08:0,36,469	0/0:24,0:23:48.96:0,49,590	0/0:19,0:18:45.12:0,45,580	0/0:68,0:64:99:0,142,1892	0/0:19,0:17:45.12:0,45,601	0/0:24,0:23:54.05:0,54,683	0/0:33,0:33:77.92:0,78,1030	0/0:21,0:21:45.74:0,46,604	0/1:15,2:15:37.13:37,0,83	0/0:8,0:8:3.24:0,3,22	0/1:3,0:2:0.01:0,0,0
chr10	16210815	.	ACTC	A	5992.37	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=13.429;DP=724;FS=11.425;HRun=0;HaplotypeScore=105.5227;InbreedingCoeff=0.9878;MQ=81.48;MQ0=0;MQRankSum=-3.319;QD=34.64;ReadPosRankSum=4.449;VQSLOD=5.3051;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,47:54:99:1569,99,0	0/0:9,0:9:24.07:0,24,484	0/0:29,0:30:60.19:0,60,1198	0/0:24,0:24:60.21:0,60,1258	0/0:16,0:16:39.13:0,39,836	0/0:28,0:28:81.28:0,81,1741	0/0:33,0:33:93.32:0,93,2034	0/0:32,0:32:72.23:0,72,1471	0/0:18,0:18:51.18:0,51,1115	0/0:27,0:27:72.24:0,72,1538	0/0:15,0:15:39.13:0,39,852	1/1:1,20:21:48.16:761,48,0	0/0:24,0:24:66.23:0,66,1441	0/0:24,0:24:72.25:0,72,1572	1/1:2,23:25:51.17:809,51,0	1/1:2,18:20:51.17:809,51,0	0/0:44,0:44:99:0,126,2755	1/1:3,28:31:75.26:1189,75,0	0/0:21,0:21:54.19:0,54,1180	0/0:25,0:25:66.23:0,66,1426	0/0:48,0:48:99:0,129,2819	0/0:20,0:20:54.19:0,54,1157	0/0:15,0:15:42.14:0,42,918	0/0:43,0:42:99:0,120,2600	1/1:2,20:22:54.18:856,54,0	0/0:19,0:19:54.17:0,54,1128	0/0:33,0:33:93.32:0,93,2030	0/0:3,0:3:9.03:0,9,197
chr10	16215919	.	A	AC	3894.03	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=13.786;DP=643;FS=4.527;HRun=1;HaplotypeScore=92.4212;InbreedingCoeff=0.9924;MQ=70.46;MQ0=0;MQRankSum=-3.369;QD=32.45;ReadPosRankSum=-0.390;VQSLOD=3.1309;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,99,1269	1/1:1,5:6:15.05:225,15,0	0/0:19,0:19:23.11:0,23,620	0/0:24,0:24:66.20:0,66,827	1/1:2,11:13:17.93:244,18,0	0/0:12,0:12:33.11:0,33,428	0/0:34,0:34:96.31:0,96,1245	0/0:29,0:29:81.05:0,81,1025	0/0:25,0:25:72.23:0,72,935	1/1:2,13:15:36.09:511,36,0	1/1:3,9:12:15.05:225,15,0	0/0:36,0:36:99:0,108,1400	0/0:31,0:31:90.29:0,90,1168	0/0:31,0:31:93.30:0,93,1207	0/0:41,0:41:99:0,123,1597	0/0:25,0:25:72.22:0,72,920	1/1:0,17:17:38.97:584,39,0	0/0:19,0:19:51.17:0,51,661	0/0:19,0:19:51.14:0,51,646	0/0:20,0:20:57.18:0,57,736	0/0:31,0:31:87.28:0,87,1129	0/0:21,0:21:63.20:0,63,818	0/0:16,0:16:45.15:0,45,584	0/0:35,0:35:99:0,102,1307	0/0:15,0:15:45.15:0,45,584	1/1:2,17:19:48.11:673,48,0	1/1:2,28:30:72.24:1073,72,0	1/1:0,8:8:24.08:360,24,0
chr10	16216165	.	AACTGTTCTC	A	8139.53	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=15.162;DP=735;FS=38.852;HRun=0;HaplotypeScore=208.2641;InbreedingCoeff=0.9988;MQ=88.45;MQ0=0;MQRankSum=-14.058;QD=61.66;ReadPosRankSum=0.148;VQSLOD=2.9986;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,132,5867	1/1:1,8:8:21.07:650,21,0	0/0:30,0:30:87.16:0,87,3459	0/0:27,0:27:74.47:0,74,2973	1/1:1,19:20:35.95:713,36,0	0/0:31,0:31:93.31:0,93,4410	0/0:43,0:43:99:0,126,6063	0/0:25,0:25:75.25:0,75,3307	0/0:27,0:27:78.27:0,78,3679	1/1:1,12:12:30.10:897,30,0	1/1:1,12:13:24.47:526,24,0	0/0:34,0:34:99:0,99,4430	0/0:27,0:27:81.26:0,81,3838	0/0:31,0:31:93.31:0,93,4304	0/0:45,0:45:99:0,135,6262	0/0:24,0:24:72.24:0,72,3354	1/1:1,16:17:39.13:1156,39,0	0/0:20,0:20:57.20:0,57,2721	0/0:23,0:23:69.24:0,69,3363	0/0:21,0:21:60.19:0,60,2791	0/0:54,0:54:99:0,163,7408	0/0:22,0:22:63.20:0,63,2968	0/0:22,0:22:60.21:0,60,2898	0/0:28,0:28:69.24:0,69,3286	0/0:22,0:22:57.16:0,57,2421	1/1:1,22:23:63.18:1760,63,0	1/1:1,24:24:48.12:1416,48,0	1/1:1,11:12:33.11:1022,33,0
chr10	16227982	.	AGTGATG	A	932.73	PASS	AB=0.918;AC=23;AF=0.523;AN=44;BaseQRankSum=-1.897;DP=852;FS=3.993;HRun=0;HaplotypeScore=195.6159;InbreedingCoeff=0.3842;MQ=69.46;MQ0=15;MQRankSum=2.602;QD=2.18;ReadPosRankSum=0.366;VQSLOD=2.7979;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:50,0:49:5.46:5,0,285	./.	./.	./.	./.	0/1:12,5:17:0:0,0,0	1/1:34,0:34:12:148,12,0	./.	0/1:22,7:29:0:0,0,0	0/0:31,0:31:1.55:0,2,4	0/1:22,0:22:0:0,0,0	0/1:30,0:30:19.80:20,0,121	1/1:14,9:23:2.87:36,3,0	0/1:18,4:22:0:0,0,0	0/0:49,0:49:6.68:0,7,560	0/0:28,0:36:21.03:0,21,397	1/1:28,0:28:2.39:9,2,0	0/0:24,0:24:23.34:0,23,283	1/1:19,0:19:9.01:104,9,0	1/1:14,5:19:5.93:72,6,0	1/1:61,0:61:32.52:383,33,0	0/0:21,0:21:6.37:0,6,60	1/1:22,0:22:18.03:273,18,0	./.	0/1:31,0:31:10.36:10,0,234	1/1:21,0:20:1.25:3,1,0	0/0:21,0:21:3.39:0,3,9	0/0:10,0:10:2.04:0,2,6
chr10	16228109	.	AT	A	6376.41	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=12.984;DP=803;FS=7.167;HRun=3;HaplotypeScore=87.2817;InbreedingCoeff=0.9973;MQ=84.27;MQ0=1;MQRankSum=-5.603;QD=34.10;ReadPosRankSum=1.779;VQSLOD=5.2623;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,108,1513	1/1:0,12:12:36.11:446,36,0	0/0:33,0:33:75.02:0,75,1093	0/0:32,0:31:64.61:0,65,827	1/1:0,16:16:45.14:558,45,0	0/0:26,0:26:78.25:0,78,1106	0/0:47,0:47:99:0,138,1955	0/0:29,0:29:78.26:0,78,1108	0/0:40,0:40:99:0,120,1708	1/1:2,28:30:81.21:975,81,0	1/1:1,15:16:42.13:520,42,0	0/0:36,0:36:99:0,105,1462	0/0:29,0:29:84.25:0,84,1180	0/0:31,0:31:87.29:0,87,1249	0/0:50,0:50:99:0,150,2122	0/0:30,0:30:90.30:0,90,1296	1/1:2,38:40:99:1376,111,0	0/0:27,0:27:72.24:0,72,1031	0/0:23,0:23:57.17:0,57,785	0/0:14,0:14:42.14:0,42,604	0/0:46,0:46:99:0,138,1904	0/0:17,0:17:48.15:0,48,675	0/0:14,0:14:42.12:0,42,569	0/0:36,0:36:99:0,102,1400	0/0:18,0:18:54.18:0,54,776	1/1:0,34:34:99:1200,99,0	1/1:1,33:34:89.98:1115,90,0	1/1:0,5:5:15.05:186,15,0
chr10	16229297	.	A	AAGTGC	9289.29	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=7.093;DP=647;FS=28.244;HRun=0;HaplotypeScore=127.4171;InbreedingCoeff=0.9931;MQ=91.41;MQ0=1;MQRankSum=-13.893;QD=76.77;ReadPosRankSum=-0.641;VQSLOD=3.4183;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,150,2991	1/1:2,9:11:33.11:989,33,0	0/0:28,0:28:75.21:0,75,1368	0/0:28,0:28:60.18:0,60,1107	1/1:2,5:7:18.06:539,18,0	0/0:12,0:12:36.12:0,36,746	0/0:31,0:31:87.30:0,87,1788	0/0:31,0:31:78.24:0,78,1506	0/0:23,0:23:63.22:0,63,1296	1/1:4,11:15:39.13:1046,39,0	1/1:5,8:15:33.11:988,33,0	0/0:38,0:38:99:0,108,2188	0/0:25,0:25:69.23:0,69,1365	0/0:17,0:17:48.12:0,48,911	0/0:24,0:24:66.23:0,66,1368	0/0:25,0:25:72.25:0,72,1460	1/1:6,19:25:57.17:1742,57,0	0/0:33,0:33:93.26:0,93,1820	0/0:27,0:27:75.21:0,75,1434	0/0:16,0:16:48.15:0,48,948	0/0:50,0:49:99:0,132,2658	0/0:16,0:16:45.15:0,45,872	0/0:13,0:13:30.10:0,30,599	0/0:29,0:29:84.29:0,84,1729	0/0:9,0:9:27.09:0,27,560	1/1:5,19:25:75.24:2208,75,0	1/1:3,15:19:48.16:1409,48,0	1/1:0,4:4:12.04:368,12,0
chr10	16230109	.	G	GGA	4949.40	PASS	AB=0.770;AC=16;AF=0.286;AN=56;BaseQRankSum=-8.728;DP=842;FS=5.383;HRun=0;HaplotypeScore=113.9116;InbreedingCoeff=0.8461;MQ=65.59;MQ0=17;MQRankSum=-0.008;QD=16.95;ReadPosRankSum=-0.610;VQSLOD=4.4654;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:44:96.26:0,96,1137	1/1:0,13:14:24.08:376,24,0	0/0:62,0:32:12.22:0,12,319	0/1:87,0:44:1.15:1,0,256	1/1:10,18:28:8.28:564,8,0	0/0:24,0:24:63.20:0,63,768	0/0:31,0:32:74.05:0,74,835	0/0:41,0:40:66.19:0,66,787	0/0:21,0:21:54.17:0,54,659	1/1:15,19:34:60.04:848,60,0	1/1:5,10:15:17.97:249,18,0	0/0:27,0:27:70.77:0,71,846	0/0:21,0:22:45.86:0,46,528	0/0:22,0:22:47.82:0,48,560	0/0:33,0:34:71.72:0,72,829	0/0:28,0:28:57.18:0,57,695	1/1:10,33:43:59.87:935,60,0	0/0:23,0:23:50.71:0,51,580	0/0:12,0:12:20.90:0,21,233	0/0:26,0:26:60.17:0,60,711	0/0:32,0:33:78.06:0,78,917	0/0:19,0:17:30.09:0,30,366	0/0:17,0:17:36.11:0,36,439	0/0:35,0:35:84.22:0,84,1008	0/0:24,0:25:60.02:0,60,709	1/1:3,23:26:29.55:937,30,0	1/1:9,13:24:47.75:730,48,0	0/1:4,12:18:12.44:310,0,12
chr10	16231178	.	A	AAAAT	3830.42	PASS	AC=26;AF=0.520;AN=50;BaseQRankSum=3.713;DP=277;FS=0.000;HRun=0;HaplotypeScore=61.8966;InbreedingCoeff=0.7448;MQ=67.06;MQ0=0;MQRankSum=-3.808;QD=27.36;ReadPosRankSum=1.010;VQSLOD=3.3110;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,0:13:12.02:195,12,0	1/1:5,1:6:15.05:307,15,0	0/0:10,0:7:3.01:0,3,37	./.	1/1:13,0:13:12.04:211,12,0	0/0:17,0:17:24.08:0,24,369	0/0:7,0:7:15.04:0,15,218	0/0:25,0:25:24.08:0,24,379	0/0:4,0:4:6.02:0,6,83	1/1:5,5:9:15.05:319,15,0	1/1:7,3:10:18.06:381,18,0	1/1:5,0:5:3.01:36,3,0	0/0:5,0:5:6.02:0,6,89	0/0:6,0:6:3.01:0,3,41	./.	1/1:2,0:3:3.01:52,3,0	1/1:17,4:21:42.14:966,42,0	1/1:10,0:13:15.05:274,15,0	0/0:20,0:20:18.06:0,18,259	0/0:13,0:13:9.03:0,9,130	0/0:9,0:9:18.06:0,18,279	./.	0/0:3,0:3:3.01:0,3,41	0/0:2,0:2:3.01:0,3,48	1/1:12,0:13:6.02:93,6,0	1/1:8,2:10:9.03:214,9,0	1/1:7,0:7:12.04:277,12,0	1/1:14,2:16:27.09:504,27,0
chr10	16231210	.	TTG	T	1706.14	PASS	AB=1.000;AC=25;AF=0.446;AN=56;BaseQRankSum=-7.156;DP=323;FS=12.091;HRun=0;HaplotypeScore=84.5111;InbreedingCoeff=0.7983;MQ=50.95;MQ0=4;MQRankSum=8.301;QD=13.87;ReadPosRankSum=0.512;VQSLOD=2.4873;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:19:3:0,3,26	0/0:9,0:9:21:0,21,193	0/0:16,0:8:9.02:0,9,115	0/0:19,0:10:18.02:0,18,261	0/0:13,0:13:15:0,15,129	1/1:7,4:12:11.87:117,12,0	1/1:4,5:9:15.04:172,15,0	1/1:21,11:36:45.95:411,46,0	1/1:0,6:6:18.05:207,18,0	0/0:11,0:10:18.46:0,18,186	0/0:8,0:10:8.86:0,9,63	0/0:6,0:9:9:0,9,79	1/1:3,3:6:9.03:103,9,0	1/1:1,3:5:11.87:117,12,0	0/1:4,0:3:0:0,0,0	0/0:10,0:10:0.47:0,0,1	0/0:25,0:25:29.91:0,30,257	0/0:9,0:10:8.98:0,9,84	1/1:7,5:12:14.87:152,15,0	1/1:2,5:7:15.04:172,15,0	1/1:5,7:12:23.89:247,24,0	1/1:1,2:3:6.02:69,6,0	1/1:1,5:7:6.02:69,6,0	1/1:1,2:3:6.02:69,6,0	0/0:12,0:12:3.48:0,3,42	0/0:10,0:10:21:0,21,184	0/0:13,0:13:20.93:0,21,171	0/0:13,0:12:18:0,18,156
chr10	16231234	.	G	GTGTGTA	4970.57	PASS	AB=1.000;AC=20;AF=0.357;AN=56;BaseQRankSum=-0.120;DP=418;FS=1.322;HRun=0;HaplotypeScore=128.0198;InbreedingCoeff=0.7153;MQ=61.34;MQ0=7;MQRankSum=-8.848;QD=27.16;ReadPosRankSum=3.188;VQSLOD=4.8155;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:28:89.10:89,0,166	1/1:2,8:11:20.02:567,20,0	0/0:32,0:19:51.04:0,51,547	0/0:31,0:19:43.75:0,44,547	1/1:7,0:20:14.97:421,15,0	0/0:13,0:13:30:0,30,337	0/0:9,0:9:24.04:0,24,317	0/0:33,0:33:76.16:0,76,809	0/0:6,0:6:18.06:0,18,290	1/1:12,0:12:29.19:458,29,0	1/1:5,7:13:11.62:310,12,0	0/1:11,0:11:34.88:168,0,35	0/0:8,0:9:17.91:0,18,219	0/0:8,0:8:18.03:0,18,241	0/1:5,0:4:0:0,0,0	0/0:12,0:12:10.48:0,10,90	1/1:8,13:27:24.08:730,24,0	0/1:8,0:7:9.49:91,0,9	0/0:14,0:14:42.01:0,42,482	0/0:8,0:8:20.85:0,21,251	0/0:18,0:19:48:0,48,593	0/0:8,0:8:18.01:0,18,196	0/0:10,0:10:15:0,15,171	0/0:10,0:10:23.99:0,24,242	0/0:13,0:13:8.01:0,8,73	1/1:3,14:18:38.85:789,39,0	1/1:5,9:15:23.91:700,24,0	1/1:2,11:13:21.04:647,21,0
chr10	16233084	.	TAA	T	3524.47	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=13.419;DP=602;FS=7.248;HRun=10;HaplotypeScore=98.2682;InbreedingCoeff=0.9962;MQ=73.25;MQ0=0;MQRankSum=-3.663;QD=26.90;ReadPosRankSum=2.790;VQSLOD=3.4877;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:37:99:0,108,1672	1/1:3,4:7:15.03:162,15,0	0/0:19,0:20:46.04:0,46,667	0/0:15,0:16:33.08:0,33,446	1/1:2,18:20:45.09:497,45,0	0/0:23,0:23:66.21:0,66,1018	0/0:30,0:30:75.20:0,75,1128	0/0:19,0:19:42.14:0,42,658	0/0:18,0:18:54.08:0,54,824	1/1:7,20:27:63.13:688,63,0	1/1:1,9:10:27.07:297,27,0	0/0:27,0:27:78.27:0,78,1237	0/0:33,0:33:96.33:0,96,1521	0/0:21,0:21:60.16:0,60,915	0/0:32,0:33:84.22:0,84,1279	0/0:40,0:40:99:0,104,1604	1/1:1,17:18:51.13:566,51,0	0/0:25,0:25:72.24:0,72,1120	0/0:22,0:22:52.37:0,52,760	0/0:11,0:11:27.09:0,27,429	0/0:26,0:26:78.27:0,78,1233	0/0:17,0:17:51.17:0,51,799	0/0:13,0:13:36.12:0,36,556	0/0:31,0:30:81.10:0,81,1223	0/0:9,0:9:24.08:0,24,379	1/1:6,17:24:42.04:526,42,0	1/1:2,15:17:48.09:521,48,0	1/1:0,8:8:24.06:268,24,0
chr10	16233237	.	A	AT	1320.76	PASS	AC=50;AF=0.926;AN=54;BaseQRankSum=0.756;DP=135;FS=0.000;HRun=0;HaplotypeScore=140.6053;InbreedingCoeff=0.3525;MQ=36.20;MQ0=0;MQRankSum=-2.689;QD=9.93;ReadPosRankSum=1.546;VQSLOD=3.8403;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,5:5:7.79:30,8,0	1/1:0,1:1:2.88:15,3,0	0/0:1,0:1:1.82:0,2,5	0/0:1,0:1:2.98:0,3,22	1/1:0,5:5:7.36:26,7,0	1/1:0,8:8:22.01:97,22,0	1/1:0,5:5:13.51:57,14,0	1/1:0,6:6:17.64:108,18,0	1/1:0,4:4:9.84:41,10,0	1/1:0,5:5:13.07:65,13,0	1/1:0,4:4:5.09:19,5,0	1/1:0,6:6:16.40:71,16,0	1/1:0,10:10:26.61:112,27,0	1/1:0,6:6:15.42:59,15,0	1/1:1,11:12:28.82:118,29,0	1/1:0,12:12:27.42:121,27,0	./.	1/1:0,3:3:5.78:32,6,0	1/1:0,5:5:14.74:92,15,0	1/1:0,4:4:8.17:35,8,0	1/1:0,3:3:2.68:11,3,0	1/1:0,1:1:2.74:12,3,0	1/1:0,4:4:9.91:36,10,0	1/1:0,4:4:7.49:27,7,0	1/1:0,6:6:16.32:70,16,0	1/1:0,4:4:6.75:46,7,0	1/1:0,7:7:19.24:88,19,0	1/1:0,3:3:5.80:32,6,0
chr10	16233434	.	TCC	T	5095.33	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-4.254;DP=628;FS=2.569;HRun=8;HaplotypeScore=101.3398;InbreedingCoeff=0.9945;MQ=59.37;MQ0=4;MQRankSum=-0.338;QD=30.69;ReadPosRankSum=1.796;VQSLOD=4.9233;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:41:99:0,108,1752	1/1:0,4:4:12.04:146,12,0	0/0:24,0:20:47.98:0,48,685	0/0:27,0:16:29.50:0,29,434	1/1:1,20:21:54.17:658,54,0	0/0:24,0:25:68.49:0,68,843	0/0:21,0:18:42.13:0,42,517	0/0:18,0:18:37.90:0,38,427	0/0:21,0:20:55.33:0,55,674	1/1:6,24:30:69.19:841,69,0	1/1:0,22:22:60.19:730,60,0	0/0:22,0:22:57.19:0,57,912	0/0:18,0:18:51.16:0,51,668	0/0:21,0:21:54.53:0,55,671	0/0:24,0:24:69.19:0,69,1123	0/0:18,0:18:45.15:0,45,760	1/1:1,32:33:81.25:988,81,0	0/0:21,0:20:51.17:0,51,860	0/0:18,0:19:27.39:0,27,458	0/0:19,0:18:44.21:0,44,546	0/0:34,0:34:83.54:0,84,941	0/0:24,0:24:57.91:0,58,736	0/0:20,0:20:54.11:0,54,705	0/0:26,0:26:62.44:0,62,709	0/0:17,0:18:53.67:0,54,871	1/1:2,19:21:57.16:680,57,0	1/1:3,22:25:57.17:686,57,0	1/1:0,10:10:30.09:366,30,0
chr10	16233904	.	C	CT	3005.02	PASS	AC=46;AF=0.920;AN=50;BaseQRankSum=4.115;DP=137;FS=0.000;HRun=1;HaplotypeScore=191.9379;InbreedingCoeff=0.4611;MQ=63.61;MQ0=0;MQRankSum=-4.127;QD=23.12;ReadPosRankSum=2.988;VQSLOD=3.5363;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,9:9:14.80:109,15,0	1/1:0,2:2:6.02:64,6,0	0/0:4,0:4:8.73:0,9,68	0/0:3,0:3:6.48:0,6,58	1/1:0,4:4:11.99:103,12,0	1/1:0,8:8:24.02:224,24,0	1/1:0,9:9:26.68:210,27,0	./.	1/1:0,10:10:26.71:245,27,0	1/1:0,3:3:9.03:110,9,0	1/1:0,2:2:5.99:51,6,0	1/1:0,13:13:38.89:328,39,0	1/1:0,11:11:29.95:260,30,0	1/1:0,12:12:29.95:258,30,0	1/1:0,11:11:29.96:261,30,0	1/1:0,13:13:36:321,36,0	1/1:0,2:2:6.01:57,6,0	1/1:0,2:2:6.02:67,6,0	1/1:0,2:2:3.01:33,3,0	1/1:0,2:2:6:54,6,0	1/1:0,4:4:6:54,6,0	1/1:0,3:3:9.01:85,9,0	1/1:0,2:2:6.01:56,6,0	1/1:0,3:3:8.97:69,9,0	./.	1/1:0,2:2:6.02:68,6,0	1/1:0,1:1:3.01:31,3,0	./.
chr10	16233909	.	CA	C	2697.19	PASS	AC=46;AF=0.920;AN=50;BaseQRankSum=3.385;DP=134;FS=0.000;HRun=1;HaplotypeScore=191.3020;InbreedingCoeff=0.4087;MQ=51.89;MQ0=0;MQRankSum=-3.400;QD=20.75;ReadPosRankSum=3.385;VQSLOD=3.6653;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,9:9:14.93:113,15,0	1/1:0,2:2:6.01:57,6,0	0/0:3,0:3:8.90:0,9,80	0/0:1,0:1:2.37:0,2,8	1/1:0,4:4:11.94:91,12,0	1/1:0,8:8:23.96:199,24,0	1/1:0,9:9:26.48:191,26,0	./.	1/1:0,10:10:26.66:216,27,0	1/1:0,3:3:9.02:100,9,0	1/1:0,2:2:5.96:45,6,0	1/1:0,13:13:38.73:296,39,0	1/1:0,11:11:29.83:225,30,0	1/1:0,12:12:29.89:236,30,0	1/1:0,11:11:29.91:239,30,0	1/1:0,13:13:35.89:284,36,0	1/1:0,2:2:6:51,6,0	1/1:0,2:2:6.01:61,6,0	1/1:0,2:2:3:29,3,0	1/1:0,2:2:5.99:49,6,0	1/1:0,4:4:5.98:47,6,0	1/1:0,3:3:8.99:75,9,0	1/1:0,2:2:5.99:50,6,0	1/1:0,3:3:8.90:60,9,0	./.	1/1:0,2:2:6.01:61,6,0	1/1:0,1:1:3:26,3,0	./.
chr10	16234003	.	C	CAA	7720.26	PASS	AB=0.857;AC=53;AF=0.981;AN=54;BaseQRankSum=2.131;DP=387;FS=15.172;HRun=1;HaplotypeScore=269.7314;InbreedingCoeff=-0.0226;MQ=49.77;MQ0=0;MQRankSum=-2.318;QD=19.95;ReadPosRankSum=1.751;VQSLOD=0.6943;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,10:15:35.67:262,36,0	1/1:2,3:5:14.91:115,15,0	1/1:6,0:6:13.89:62,14,0	0/1:5,1:6:17.53:48,0,18	1/1:1,11:12:35.73:281,36,0	1/1:3,13:16:41.88:364,42,0	1/1:7,16:23:49.13:434,49,0	1/1:8,10:18:42.01:424,42,0	1/1:4,10:14:41.33:307,41,0	1/1:4,15:19:56.98:579,57,0	1/1:4,5:9:20.79:145,21,0	1/1:5,13:18:44.77:353,45,0	1/1:9,17:26:53.58:418,54,0	1/1:8,9:17:32.81:247,33,0	1/1:6,21:27:62.79:497,63,0	1/1:9,12:21:47.85:390,48,0	1/1:2,6:8:15:152,15,0	1/1:4,6:10:23.99:231,24,0	1/1:5,8:13:32.94:322,33,0	1/1:5,8:13:35.60:252,36,0	1/1:2,5:7:14.95:119,15,0	1/1:0,16:17:47.75:377,48,0	1/1:3,11:14:38.63:289,39,0	1/1:3,8:11:11.82:78,12,0	1/1:4,10:14:35.75:270,36,0	1/1:6,12:18:50.99:472,51,0	1/1:3,7:10:29.70:233,30,0	./.
chr10	16234205	.	GGCAA	G	5857.30	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=12.305;DP=662;FS=14.023;HRun=0;HaplotypeScore=117.1894;InbreedingCoeff=0.9929;MQ=85.43;MQ0=0;MQRankSum=-3.104;QD=48.81;ReadPosRankSum=4.034;VQSLOD=5.3820;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,99,2424	1/1:1,9:10:27.09:459,27,0	0/0:26,0:26:72.25:0,72,1825	0/0:21,0:21:54.17:0,54,1190	1/1:0,10:10:18.06:327,18,0	0/0:18,0:18:48.12:0,48,1241	0/0:27,0:27:75.26:0,75,2052	0/0:25,0:25:66.22:0,66,1726	0/0:31,0:31:93.27:0,93,2374	1/1:0,13:13:39.12:712,39,0	1/1:1,10:11:24.08:465,24,0	0/0:31,0:31:90.27:0,90,2404	0/0:30,0:30:90.27:0,90,2385	0/0:26,0:26:72.25:0,72,1970	0/0:36,0:36:99:0,108,2636	0/0:20,0:19:60.17:0,60,1579	1/1:0,25:25:60.20:1122,60,0	0/0:35,0:35:99:0,102,2762	0/0:18,0:18:51.16:0,51,1239	0/0:19,0:19:51:0,51,1265	0/0:48,0:48:99:0,138,3635	0/0:20,0:20:57.04:0,57,1331	0/0:15,0:15:39.13:0,39,1067	0/0:37,0:37:99:0,105,2786	0/0:25,0:25:69.19:0,69,1795	1/1:0,24:24:72.25:1377,72,0	1/1:0,22:22:60.21:1162,60,0	1/1:0,5:5:12.04:233,12,0
chr10	16235063	.	T	TA	5334.03	PASS	AB=0.950;AC=17;AF=0.304;AN=56;BaseQRankSum=-11.270;DP=689;FS=5.179;HRun=7;HaplotypeScore=71.2189;InbreedingCoeff=0.9560;MQ=82.48;MQ0=0;MQRankSum=0.042;QD=27.21;ReadPosRankSum=1.835;VQSLOD=5.7599;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,120,1126	1/1:1,11:12:24.07:290,24,0	0/0:21,0:22:31.31:0,31,349	0/1:18,0:19:0.09:0,0,248	1/1:5,18:23:54.10:634,54,0	0/0:18,0:18:47.29:0,47,442	0/0:23,0:23:60.08:0,60,573	0/0:39,0:39:96.11:0,96,913	0/0:14,0:14:42.02:0,42,395	1/1:3,27:30:81.23:956,81,0	1/1:2,21:23:60.03:669,60,0	0/0:22,0:22:60.04:0,60,564	0/0:32,0:32:90.13:0,90,865	0/0:33,0:33:93.14:0,93,894	0/0:23,0:23:57.06:0,57,541	0/0:20,0:20:51.08:0,51,492	1/1:2,30:32:84.26:1015,84,0	0/0:18,0:18:54.08:0,54,516	0/0:26,0:26:57.04:0,57,533	0/0:29,0:29:75.08:0,75,712	0/0:25,0:25:66.06:0,66,625	0/0:19,0:19:45.06:0,45,431	0/0:25,0:25:72.07:0,72,685	0/0:35,0:35:96.09:0,96,907	0/0:25,0:25:66.08:0,66,627	1/1:3,20:23:60.10:682,60,0	1/1:3,21:24:63.19:761,63,0	1/1:1,9:10:27.08:326,27,0
chr10	16235467	.	C	CT	6157.98	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=5.500;DP=678;FS=8.831;HRun=3;HaplotypeScore=79.6648;InbreedingCoeff=0.9917;MQ=67.38;MQ0=1;MQRankSum=1.685;QD=38.01;ReadPosRankSum=1.378;VQSLOD=4.8176;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,126,1460	1/1:0,7:7:18.06:252,18,0	0/0:31,0:22:10.74:0,11,506	0/0:43,0:34:76.13:0,76,843	1/1:1,17:18:48.16:672,48,0	0/0:25,0:25:66.63:0,67,758	0/0:32,0:32:90.20:0,90,1019	0/0:29,0:29:72.15:0,72,822	0/0:19,0:19:54.06:0,54,627	1/1:0,26:26:78.26:1091,78,0	1/1:1,13:14:36.12:504,36,0	0/0:28,0:28:84.22:0,84,982	0/0:23,0:23:69.21:0,69,828	0/0:24,0:24:72.20:0,72,842	0/0:25,0:25:72.22:0,72,864	0/0:20,0:20:54.15:0,54,638	1/1:1,26:27:69.23:965,69,0	0/0:14,0:14:39.10:0,39,455	0/0:19,0:19:57.17:0,57,674	0/0:19,0:19:57.16:0,57,672	0/0:34,0:34:99:0,102,1175	0/0:24,0:24:69.21:0,69,827	0/0:21,0:21:57.17:0,57,684	0/0:21,0:21:63.19:0,63,755	0/0:18,0:18:51.16:0,51,612	1/1:1,33:34:99:1331,99,0	1/1:1,24:25:66.22:924,66,0	1/1:0,11:11:30.10:419,30,0
chr10	16235707	.	TA	T	5678.80	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=12.451;DP=594;FS=11.121;HRun=4;HaplotypeScore=63.7064;InbreedingCoeff=0.9988;MQ=87.26;MQ0=0;MQRankSum=-1.032;QD=33.02;ReadPosRankSum=4.009;VQSLOD=4.8722;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,105,1449	1/1:0,8:8:21.06:252,21,0	0/0:29,0:29:46.76:0,47,851	0/0:19,0:19:30.98:0,31,432	1/1:0,22:22:66.17:776,66,0	0/0:18,0:18:48.15:0,48,656	0/0:19,0:19:57.15:0,57,746	0/0:30,0:30:84.25:0,84,1106	0/0:16,0:16:42.14:0,42,575	1/1:0,26:26:78.23:925,78,0	1/1:0,26:26:69.17:811,69,0	0/0:14,0:14:42.14:0,42,587	0/0:22,0:22:66.20:0,66,892	0/0:18,0:18:48.16:0,48,671	0/0:26,0:26:72.24:0,72,1008	0/0:21,0:21:60.20:0,60,840	1/1:2,21:23:51.16:612,51,0	0/0:18,0:18:51.13:0,51,688	0/0:19,0:19:57.16:0,57,778	0/0:19,0:19:57.18:0,57,781	0/0:12,0:12:33.11:0,33,462	0/0:25,0:25:72.13:0,72,978	0/0:22,0:22:63.17:0,63,827	0/0:22,0:22:66.22:0,66,922	0/0:17,0:17:51.17:0,51,713	1/1:0,21:21:63.19:756,63,0	1/1:1,37:38:99:1259,105,0	1/1:0,8:8:24.07:288,24,0
chr10	16238106	.	C	CAT	9546.84	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=2.718;DP=776;FS=0.659;HRun=0;HaplotypeScore=97.8318;InbreedingCoeff=0.9999;MQ=82.33;MQ0=0;MQRankSum=0.205;QD=51.05;ReadPosRankSum=-0.124;VQSLOD=5.4579;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,114,1689	1/1:1,10:12:33.11:617,33,0	0/0:22,0:22:57.13:0,57,820	0/0:20,0:20:51.10:0,51,716	1/1:1,25:27:69.24:1331,69,0	0/0:30,0:30:87.30:0,87,1325	0/0:36,0:36:99:0,102,1450	0/0:32,0:32:90.29:0,90,1340	0/0:41,0:41:99:0,120,1788	1/1:1,27:28:81.24:1468,81,0	1/1:1,21:23:57.20:1098,57,0	0/0:36,0:36:99:0,105,1583	0/0:31,0:31:87.26:0,87,1302	0/0:35,0:35:99:0,102,1504	0/0:37,0:37:99:0,108,1648	0/0:35,0:35:99:0,99,1471	1/1:3,29:32:84.29:1621,84,0	0/0:20,0:20:54.18:0,54,826	0/0:25,0:25:72.21:0,72,1054	0/0:19,0:19:51.17:0,51,780	0/0:44,0:44:99:0,132,1966	0/0:20,0:20:57.14:0,57,803	0/0:20,0:20:51.02:0,51,778	0/0:26,0:26:78.25:0,78,1171	0/0:21,0:21:57.19:0,57,871	1/1:2,31:33:96.31:1790,96,0	1/1:0,20:20:48.16:926,48,0	1/1:0,12:12:36.12:695,36,0
chr10	16238262	.	AGAACC	A	8924.21	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=11.377;DP=673;FS=0.725;HRun=0;HaplotypeScore=132.8838;InbreedingCoeff=0.9997;MQ=80.97;MQ0=0;MQRankSum=-6.456;QD=52.50;ReadPosRankSum=6.028;VQSLOD=4.8507;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,47:50:99:2198,102,0	0/0:14,0:14:39.13:0,39,1170	0/0:22,0:22:66.19:0,66,1838	0/0:17,0:17:48.16:0,48,1475	0/0:13,0:13:39.13:0,39,1201	0/0:23,0:23:66.23:0,66,2090	0/0:39,0:38:99:0,117,3633	0/0:30,0:30:87.29:0,87,2562	0/0:18,0:18:54.19:0,54,1690	0/0:31,0:31:90.30:0,90,2739	0/0:22,0:22:63.19:0,63,1880	1/1:1,19:20:51.18:1137,51,0	0/0:9,0:9:27.09:0,27,800	0/0:27,0:27:81.28:0,81,2558	1/1:0,24:24:63.22:1404,63,0	1/1:1,26:27:69.24:1538,69,0	0/0:27,0:27:81.28:0,81,2507	1/1:1,24:25:69.24:1539,69,0	0/0:18,0:18:51.18:0,51,1591	0/0:20,0:20:60.21:0,60,1833	0/0:48,0:48:99:0,135,4205	0/0:23,0:23:69.22:0,69,2146	0/0:20,0:20:60.21:0,60,1844	0/0:29,0:29:84.29:0,84,2642	1/1:1,23:24:51.17:1108,51,0	0/0:29,0:29:87.29:0,87,2739	0/0:12,0:12:36.11:0,36,1089	0/0:12,0:12:33.11:0,33,1005
chr10	16240298	.	AC	A	5664.77	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=19.209;DP=709;FS=32.350;HRun=1;HaplotypeScore=118.8970;InbreedingCoeff=0.9986;MQ=69.16;MQ0=0;MQRankSum=-6.919;QD=31.82;ReadPosRankSum=3.900;VQSLOD=2.7770;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,121,1685	1/1:3,4:7:19.93:168,20,0	0/0:35,0:31:80.92:0,81,934	0/0:28,2:25:47.69:0,48,625	1/1:1,28:29:85.71:983,86,0	0/0:17,0:16:51.15:0,51,701	0/0:27,0:27:81.27:0,81,1150	0/0:41,0:41:99:0,111,1475	0/0:20,0:20:60.17:0,60,817	1/1:7,28:35:96.58:1135,97,0	1/1:2,17:19:56.70:573,57,0	0/0:23,0:23:69.16:0,69,885	0/0:21,0:21:63.18:0,63,861	0/0:23,0:23:69.20:0,69,942	0/0:25,0:25:75.24:0,75,1050	0/0:33,0:33:99:0,99,1349	1/1:3,20:23:26.60:717,27,0	0/0:25,0:25:69.18:0,69,932	0/0:30,0:30:90.23:0,90,1145	0/0:25,0:25:72.19:0,72,958	0/0:20,0:20:60.17:0,60,802	0/0:17,0:17:51.15:0,51,687	0/0:32,0:32:96.26:0,96,1290	0/0:19,0:19:54.18:0,54,768	0/0:26,0:26:78.15:0,78,1028	1/1:2,22:24:68.71:825,69,0	1/1:3,30:33:95:1018,95,0	1/1:1,7:8:23.89:246,24,0
chr10	16240299	.	CA	C	2751.84	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=18.984;DP=708;FS=25.114;HRun=6;HaplotypeScore=127.8083;InbreedingCoeff=0.9985;MQ=67.92;MQ0=0;MQRankSum=-6.582;QD=15.55;ReadPosRankSum=3.718;VQSLOD=2.1582;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,123,1728	1/1:4,3:7:20.53:161,21,0	0/0:34,0:30:77.88:0,78,1012	0/0:30,0:26:46.98:0,47,684	1/1:29,0:29:84.69:525,85,0	0/0:17,0:16:51.17:0,51,730	0/0:28,0:28:84.27:0,84,1188	0/0:41,0:41:99:0,108,1510	0/0:20,0:20:60.20:0,60,861	1/1:34,0:34:80.23:536,80,0	1/1:19,0:19:46.21:261,46,0	0/0:23,0:23:63.19:0,63,867	0/0:21,0:21:63.21:0,63,891	0/0:23,0:23:69.20:0,69,955	0/0:26,0:26:78.25:0,78,1102	0/0:33,0:33:96.31:0,96,1361	1/1:22,1:23:24.47:365,24,0	0/0:25,0:25:69.23:0,69,984	0/0:29,0:29:84.27:0,84,1175	0/0:26,0:26:75.24:0,75,1054	0/0:20,0:20:60.20:0,60,854	0/0:17,0:17:48.12:0,48,664	0/0:30,0:30:87.28:0,87,1231	0/0:19,0:19:54.18:0,54,776	0/0:26,0:26:78.25:0,78,1099	1/1:22,2:24:67.57:458,68,0	1/1:33,0:33:87.37:507,87,0	1/1:7,1:8:23.21:146,23,0
chr10	16240301	.	A	ACC	8104.80	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=18.769;DP=713;FS=24.694;HRun=0;HaplotypeScore=125.0733;InbreedingCoeff=0.9987;MQ=67.25;MQ0=0;MQRankSum=-4.305;QD=45.79;ReadPosRankSum=4.136;VQSLOD=3.7080;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,129,1995	1/1:3,4:7:21.07:338,21,0	0/0:32,0:28:77.29:0,77,1210	0/0:31,0:26:56.34:0,56,837	1/1:1,28:29:87.29:1422,87,0	0/0:17,0:16:51.17:0,51,830	0/0:30,0:30:84.27:0,84,1343	0/0:42,0:42:99:0,114,1747	0/0:20,0:20:60.20:0,60,979	1/1:4,27:32:91.19:1541,91,0	1/1:1,17:18:54.15:785,54,0	0/0:21,0:21:63.20:0,63,999	0/0:21,0:21:63.21:0,63,1019	0/0:25,0:25:72.20:0,72,1102	0/0:26,0:26:78.27:0,78,1270	0/0:33,0:33:99:0,99,1587	1/1:4,20:24:24.42:1016,24,0	0/0:25,0:25:69.24:0,69,1122	0/0:28,0:28:84.25:0,84,1274	0/0:27,0:27:78.25:0,78,1244	0/0:23,0:23:66.19:0,66,1026	0/0:16,0:16:48.16:0,48,778	0/0:29,0:29:87.28:0,87,1391	0/0:20,0:20:57.18:0,57,906	0/0:26,0:26:78.26:0,78,1246	1/1:2,22:24:69.23:1166,69,0	1/1:6,29:35:96.25:1472,96,0	1/1:1,7:8:24.08:365,24,0
chr10	16240694	.	AT	A	7834.35	PASS	AB=0.571;AC=51;AF=0.911;AN=56;BaseQRankSum=-0.927;DP=706;FS=6.270;HRun=13;HaplotypeScore=93.9366;InbreedingCoeff=0.5555;MQ=72.26;MQ0=2;MQRankSum=-2.239;QD=11.69;ReadPosRankSum=2.113;VQSLOD=4.6337;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:11,47:60:99:931,129,0	1/1:3,0:8:10.18:29,10,0	0/0:19,2:19:7.73:0,8,216	0/0:14,1:14:7.41:0,7,70	1/1:3,0:19:24.39:71,24,0	1/1:5,23:31:16.36:419,16,0	1/1:1,12:13:29.82:219,30,0	1/1:7,24:33:72.62:515,73,0	1/1:7,16:24:14.59:261,15,0	1/1:10,1:36:51.13:161,51,0	1/1:4,0:17:26.48:76,26,0	1/1:8,18:27:47.97:337,48,0	1/1:7,19:27:26.48:349,26,0	1/1:3,12:15:9.57:231,10,0	1/1:3,27:35:83.81:561,84,0	1/1:4,19:24:55.66:400,56,0	1/1:8,0:45:65.15:188,65,0	1/1:3,20:23:59.65:438,60,0	1/1:3,17:21:26.54:347,27,0	1/1:6,24:33:71.72:513,72,0	1/1:3,20:23:50.71:372,51,0	1/1:5,20:27:2.34:325,2,0	0/1:7,19:28:20.78:339,0,21	1/1:6,17:23:21.50:321,22,0	1/1:8,9:18:4.56:157,5,0	1/1:2,0:21:38.70:112,39,0	1/1:3,0:30:46.72:135,47,0	1/1:0,0:8:10.19:29,10,0
chr10	16242384	.	T	TA	5791.14	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=3.976;DP=656;FS=4.917;HRun=3;HaplotypeScore=66.0002;InbreedingCoeff=0.9992;MQ=88.98;MQ0=0;MQRankSum=-6.347;QD=37.60;ReadPosRankSum=1.440;VQSLOD=5.3750;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:96.27:0,96,1137	1/1:0,10:10:30.10:420,30,0	0/0:28,0:28:72.19:0,72,825	0/0:21,0:21:47.59:0,48,532	1/1:0,23:23:63.21:882,63,0	0/0:19,0:19:54.17:0,54,648	0/0:32,0:32:90.26:0,90,1068	0/0:33,0:33:96.28:0,96,1142	0/0:29,0:29:84.26:0,84,1008	1/1:0,19:20:60.18:814,60,0	1/1:1,14:15:39.09:524,39,0	0/0:23,0:23:66.20:0,66,792	0/0:24,0:24:72.20:0,72,849	0/0:20,0:20:54.16:0,54,648	0/0:23,0:23:66.19:0,66,781	0/0:26,0:26:72.21:0,72,853	1/1:2,28:30:72.24:1008,72,0	0/0:24,0:24:69.18:0,69,812	0/0:23,0:23:63.19:0,63,754	0/0:18,0:18:54.15:0,54,637	0/0:27,0:27:78.24:0,78,936	0/0:20,0:20:60.18:0,60,720	0/0:13,0:13:39.11:0,39,457	0/0:43,0:43:99:0,111,1332	0/0:16,0:16:48.15:0,48,576	1/1:1,21:22:63.21:882,63,0	1/1:1,23:23:69.23:966,69,0	1/1:3,7:10:21.07:294,21,0
chr10	16243519	.	C	CGAAT	17239.53	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-0.187;DP=796;FS=4.874;HRun=0;HaplotypeScore=128.3548;InbreedingCoeff=0.9305;MQ=68.39;MQ0=3;MQRankSum=-2.624;QD=31.63;ReadPosRankSum=-0.851;VQSLOD=4.6007;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:81.21:0,81,1197	1/1:10,0:10:24.08:411,24,0	0/0:16,0:14:9.03:0,9,127	0/0:17,0:14:11.96:0,12,160	1/1:37,0:37:46.34:1167,46,0	1/1:12,25:37:51.17:1222,51,0	1/1:9,17:27:36.12:860,36,0	1/1:21,9:31:35.88:463,36,0	1/1:13,24:38:60.21:1437,60,0	1/1:38,0:38:46.45:1108,46,0	1/1:28,0:28:17.92:935,18,0	0/0:35,0:35:66.21:0,66,1030	1/1:9,18:27:48.16:1127,48,0	1/1:4,21:26:45.15:1079,45,0	0/0:27,0:27:60.18:0,60,914	0/0:33,0:33:63.16:0,63,930	1/1:22,0:22:39.13:711,39,0	0/0:14,0:14:33.04:0,33,430	1/1:19,8:27:24.03:476,24,0	0/0:41,1:42:12.31:0,12,1113	1/1:11,14:27:33.05:726,33,0	1/1:10,21:33:9.28:1247,9,0	1/1:5,19:24:42.14:1002,42,0	1/1:10,15:26:39.13:935,39,0	0/0:27,0:27:48.15:0,48,721	1/1:33,0:33:8.74:842,9,0	1/1:37,0:37:25.30:1156,25,0	1/1:15,0:15:2.13:336,2,0
chr10	16243547	.	T	TGAAA	17468.97	PASS	AB=1.000;AC=27;AF=0.482;AN=56;BaseQRankSum=8.715;DP=796;FS=6.584;HRun=0;HaplotypeScore=137.3643;InbreedingCoeff=0.2140;MQ=68.35;MQ0=4;MQRankSum=-4.376;QD=32.17;ReadPosRankSum=6.412;VQSLOD=4.3251;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,99,1502	1/1:3,8:11:33.08:697,33,0	0/0:19,0:14:30.05:0,30,361	0/0:21,0:19:30.55:0,31,437	1/1:10,24:34:96.17:1953,96,0	0/1:39,0:38:99:722,0,186	0/1:34,0:34:99:433,0,315	0/1:26,0:26:99:238,0,405	0/1:34,0:34:93.66:860,0,94	1/1:18,18:36:99:1894,99,0	1/1:15,18:33:90.12:1664,90,0	0/0:32,0:32:93.13:0,93,1377	0/1:29,0:29:99:664,0,127	0/1:26,0:26:18.80:651,0,19	0/0:30,0:30:84.15:0,84,1206	0/0:28,0:28:78.16:0,78,1142	1/1:8,12:19:40.05:1051,40,0	0/0:18,0:18:45.02:0,45,577	0/1:28,0:28:99:196,0,383	0/0:41,0:41:55.25:0,55,1393	0/1:24,0:24:99:407,0,115	0/1:37,0:36:99:743,0,321	0/1:25,0:25:99:614,0,107	0/1:21,0:21:44.81:563,0,45	0/0:25,0:25:69.12:0,69,970	1/1:19,13:32:63.51:1515,64,0	1/1:20,18:40:99:2108,111,0	1/1:11,3:14:35.92:497,36,0
chr10	16243595	.	GT	G	7431.32	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=14.499;DP=774;FS=3.085;HRun=1;HaplotypeScore=92.7364;InbreedingCoeff=0.9993;MQ=81.81;MQ0=0;MQRankSum=-5.349;QD=37.53;ReadPosRankSum=3.846;VQSLOD=5.3279;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,117,1839	1/1:0,8:8:21.07:294,21,0	0/0:21,0:21:63.20:0,63,950	0/0:21,0:21:53.20:0,53,842	1/1:0,24:24:51.17:713,51,0	0/0:37,0:36:93.30:0,93,1456	0/0:36,0:36:99:0,108,1679	0/0:37,0:37:99:0,111,1713	0/0:22,0:22:54.18:0,54,859	1/1:1,33:34:99:1385,102,0	1/1:0,27:27:72.24:999,72,0	0/0:32,0:32:96.33:0,96,1532	0/0:26,0:26:75.26:0,75,1198	0/0:19,0:19:45.14:0,45,695	0/0:29,0:29:87.27:0,87,1339	0/0:35,0:35:99:0,105,1653	1/1:0,26:26:63.21:880,63,0	0/0:17,0:17:48.09:0,48,712	0/0:24,0:24:72.18:0,72,1101	0/0:34,0:34:99:0,102,1597	0/0:30,0:30:78.25:0,78,1220	0/0:39,0:38:99:0,114,1750	0/0:26,0:26:75.24:0,75,1171	0/0:24,0:24:63.21:0,63,1000	0/0:27,0:27:81.28:0,81,1292	1/1:0,33:33:99:1364,99,0	1/1:0,32:32:90.30:1253,90,0	1/1:0,14:14:39.13:544,39,0
chr10	16244469	.	G	GT	1271.72	PASS	AB=0.961;AC=25;AF=0.446;AN=56;BaseQRankSum=-2.522;DP=583;FS=26.830;HRun=0;HaplotypeScore=109.7666;InbreedingCoeff=0.0625;MQ=71.79;MQ0=1;MQRankSum=0.140;QD=3.24;ReadPosRankSum=-4.964;VQSLOD=0.2512;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:86.99:0,87,923	1/1:6,0:6:5.98:48,6,0	0/0:15,0:14:35.18:0,35,348	0/0:15,0:16:28.05:0,28,223	0/1:14,0:13:13.39:43,0,13	0/1:23,0:23:5.39:5,0,22	0/1:25,0:25:7.41:50,0,7	1/1:20,0:20:19.92:129,20,0	0/1:16,1:17:4.75:89,0,5	0/1:10,1:11:44.61:61,0,45	1/1:11,0:11:5.13:40,5,0	0/0:19,0:19:53.97:0,54,598	0/1:32,0:32:8.48:91,0,8	0/1:32,1:33:31.77:32,0,48	0/0:29,0:29:69.08:0,69,791	0/0:28,0:28:72.08:0,72,820	1/1:21,0:21:5.31:143,5,0	0/0:19,0:19:51.01:0,51,578	1/1:24,0:24:7.91:153,8,0	1/1:15,0:15:3.16:63,3,0	0/1:44,0:44:9.04:167,0,9	0/1:27,0:27:3.61:95,0,4	0/1:24,0:24:16.71:17,0,27	0/1:15,0:15:11.68:30,0,12	0/0:21,0:21:39.50:0,39,440	0/1:9,9:18:15.44:171,0,15	0/1:12,0:12:20.14:20,0,93	0/0:7,0:7:7.24:0,7,90
chr10	16245552	.	GATGA	G	6011.62	PASS	AB=0.962;AC=19;AF=0.339;AN=56;BaseQRankSum=15.418;DP=809;FS=5.886;HRun=0;HaplotypeScore=130.9140;InbreedingCoeff=0.8495;MQ=72.28;MQ0=2;MQRankSum=-0.413;QD=24.05;ReadPosRankSum=0.307;VQSLOD=4.2231;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:93.28:0,93,2158	1/1:4,11:15:27.05:400,27,0	0/0:25,0:18:6.02:0,6,143	0/0:21,0:17:3.01:0,3,65	1/1:16,22:38:60.16:922,60,0	0/0:26,1:27:9.70:0,10,1238	0/0:31,0:31:42.14:0,42,1000	0/0:38,0:38:39.13:0,39,928	0/0:36,0:36:69.24:0,69,1596	1/1:8,15:23:45.13:687,45,0	1/1:10,12:23:39.08:570,39,0	0/0:26,0:26:54.19:0,54,1287	0/0:42,0:42:99:0,105,2471	1/1:10,17:27:54.18:855,54,0	0/0:28,0:28:57.18:0,57,1288	0/0:54,0:54:99:0,111,2619	1/1:16,15:31:36.12:570,36,0	0/0:17,0:17:30.10:0,30,704	0/0:22,0:22:30.10:0,30,674	0/0:25,0:25:54.17:0,54,1223	0/1:24,1:25:11.39:11,0,658	0/0:20,0:20:36.12:0,36,852	0/0:39,0:38:72.25:0,72,1694	0/0:19,0:19:42.14:0,42,1001	0/0:43,0:43:99:0,99,2351	1/1:4,27:31:81.25:1237,81,0	1/1:13,18:31:45.15:713,45,0	1/1:4,2:6:3.01:47,3,0
chr10	16250463	.	CTT	C	5005.93	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=9.346;DP=579;FS=20.692;HRun=14;HaplotypeScore=91.3285;InbreedingCoeff=0.9367;MQ=67.07;MQ0=8;MQRankSum=-1.160;QD=12.24;ReadPosRankSum=0.991;VQSLOD=1.9747;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:35:73.15:0,73,853	1/1:4,0:11:13.66:59,14,0	0/0:21,0:13:20.70:0,21,193	0/0:15,0:6:2.83:0,3,40	1/1:6,0:25:48.60:214,49,0	1/1:2,18:21:50.77:456,51,0	1/1:4,6:10:17.66:150,18,0	1/1:14,21:35:50.36:487,50,0	1/1:1,7:9:5.85:103,6,0	1/1:9,0:22:31.91:147,32,0	1/1:6,0:19:30.78:131,31,0	0/0:13,0:15:26.57:0,27,331	1/1:4,8:12:20.99:194,21,0	1/1:7,7:14:11.91:111,12,0	0/0:17,0:20:52.63:0,53,643	0/0:17,0:16:45.15:0,45,627	1/1:7,0:33:64.25:276,64,0	0/0:22,0:22:47.60:0,48,608	1/1:7,14:20:29.81:320,30,0	1/1:6,16:24:41.58:419,42,0	1/1:5,9:15:23.67:206,24,0	1/1:4,16:22:38.59:392,39,0	1/1:3,6:11:20.68:178,21,0	1/1:3,25:29:63.01:583,63,0	0/0:19,0:20:41.51:0,42,495	1/1:8,0:33:63.06:272,63,0	1/1:3,0:26:54.85:237,55,0	1/1:1,1:8:16.45:71,16,0
chr10	16251884	.	T	TAATAAC	2335.89	PASS	AB=1.000;AC=18;AF=0.321;AN=56;BaseQRankSum=3.222;DP=280;FS=8.083;HRun=0;HaplotypeScore=55.1077;InbreedingCoeff=0.6698;MQ=69.18;MQ0=2;MQRankSum=-3.405;QD=16.22;ReadPosRankSum=0.370;VQSLOD=1.4176;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:39.57:0,40,769	1/1:0,3:3:5.91:123,6,0	0/0:8,0:7:17.85:0,18,180	0/0:1,0:1:2.04:0,2,6	1/1:10,0:10:29.94:318,30,0	0/0:9,0:9:24.02:0,24,365	0/0:2,0:2:6.01:0,6,97	0/1:46,0:45:99:441,0,752	0/0:5,0:5:14.99:0,15,143	1/1:10,0:10:27.04:369,27,0	1/1:8,0:8:20.97:226,21,0	0/0:5,0:5:14.99:0,15,171	0/0:6,0:6:8.98:0,9,138	0/0:5,0:5:3.76:0,4,67	0/0:8,0:8:24.01:0,24,334	0/0:9,0:9:27.02:0,27,390	1/1:2,1:22:6.02:135,6,0	0/0:16,0:16:41.38:0,41,562	0/0:13,0:13:30.80:0,31,278	0/1:12,0:12:87.70:88,0,157	0/0:3,0:3:8.92:0,9,64	0/0:4,0:4:12:0,12,126	0/0:6,0:6:17.97:0,18,148	0/0:1,0:1:2.99:0,3,24	0/0:19,0:19:54:0,54,632	1/1:0,10:11:26.86:365,27,0	1/1:0,8:10:6.02:215,6,0	1/1:12,0:11:32.79:248,33,0
chr10	16252479	.	C	CA	6531.86	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-14.487;DP=796;FS=0.982;HRun=7;HaplotypeScore=72.5320;InbreedingCoeff=0.9999;MQ=80.28;MQ0=0;MQRankSum=-0.851;QD=32.18;ReadPosRankSum=1.561;VQSLOD=4.6375;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:87.14:0,87,840	1/1:0,14:14:42.13:507,42,0	0/0:30,0:30:69.20:0,69,728	0/0:19,0:19:50.50:0,50,429	1/1:2,31:33:90.28:1087,90,0	0/0:26,0:26:63.08:0,63,603	0/0:32,0:32:84.11:0,84,805	0/0:33,0:33:84.11:0,84,801	0/0:26,0:26:75.12:0,75,724	1/1:0,23:23:69.20:822,69,0	1/1:3,23:25:60.18:725,60,0	0/0:31,0:31:87.14:0,87,840	0/0:37,0:37:99:0,111,1060	0/0:34,0:34:99:0,102,980	0/0:40,0:41:99:0,114,1101	0/0:37,0:37:96.14:0,96,926	1/1:2,28:30:81.25:978,81,0	0/0:19,0:19:54.09:0,54,521	0/0:23,0:23:63.10:0,63,608	0/0:38,0:38:99:0,99,950	0/0:29,0:29:72.08:0,72,688	0/0:21,0:21:32.86:0,33,445	0/0:26,0:26:69.10:0,69,665	0/0:30,0:30:81.13:0,81,782	0/0:29,0:29:81.13:0,81,782	1/1:5,30:35:93.22:1072,93,0	1/1:2,22:24:66.20:797,66,0	1/1:1,17:18:45.14:544,45,0
chr10	16254436	.	A	AGAG	7079.95	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-3.904;DP=395;FS=1.793;HRun=0;HaplotypeScore=66.4907;InbreedingCoeff=0.8699;MQ=52.04;MQ0=3;MQRankSum=0.868;QD=30.26;ReadPosRankSum=-0.842;VQSLOD=4.8412;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:23.44:0,23,339	1/1:0,1:1:3.01:62,3,0	0/0:36,0:6:11.39:0,11,64	0/0:45,0:15:1.97:0,2,51	1/1:12,2:14:26.59:353,27,0	1/1:12,5:17:27.08:435,27,0	1/1:14,3:17:30.09:479,30,0	1/1:11,0:10:14.99:145,15,0	1/1:5,3:7:12.04:228,12,0	1/1:9,5:14:33.05:533,33,0	1/1:8,3:11:23.94:318,24,0	0/0:16,0:16:39.02:0,39,444	1/1:7,2:9:21.07:363,21,0	1/1:4,8:13:15.05:294,15,0	0/0:9,0:9:26.60:0,27,292	0/0:18,0:18:48.15:0,48,686	1/1:8,6:14:36.04:565,36,0	0/0:13,0:13:27.06:0,27,353	1/1:5,3:8:15.05:290,15,0	1/1:3,2:5:9.03:162,9,0	1/1:12,12:24:48.13:901,48,0	1/1:9,4:13:33.08:526,33,0	1/1:1,5:6:6.02:125,6,0	1/1:1,16:19:21.07:435,21,0	0/0:11,0:11:30.05:0,30,396	1/1:11,2:12:27.06:453,27,0	1/1:2,6:8:15.05:288,15,0	1/1:2,7:9:6.02:125,6,0
chr10	16256029	.	AT	A	2586.41	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=9.910;DP=435;FS=0.429;HRun=10;HaplotypeScore=44.4664;InbreedingCoeff=0.8652;MQ=74.50;MQ0=7;MQRankSum=0.044;QD=16.47;ReadPosRankSum=3.163;VQSLOD=3.7834;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:66.18:0,66,730	1/1:1,11:12:23.98:208,24,0	0/1:26,0:12:12.86:13,0,96	0/0:22,0:13:9.24:0,9,145	1/1:2,21:23:59.95:513,60,0	0/0:23,0:23:60.15:0,60,656	0/0:12,0:12:33.07:0,33,356	0/0:20,0:20:48.11:0,48,522	0/0:10,0:10:30.08:0,30,331	1/1:1,19:20:56.99:495,57,0	1/1:4,13:17:35.99:311,36,0	0/0:17,0:17:42.09:0,42,449	0/0:16,0:16:42.11:0,42,464	0/0:15,0:15:38.51:0,39,385	0/0:8,0:8:24.06:0,24,265	0/0:12,0:12:30.08:0,30,332	1/1:1,22:23:59.99:521,60,0	0/0:21,0:21:57.13:0,57,621	0/0:19,0:19:48.13:0,48,526	0/0:11,0:11:33.09:0,33,365	0/0:11,0:11:33.09:0,33,365	0/0:1,0:1:3.01:0,3,33	0/0:11,0:11:33.09:0,33,365	0/0:11,0:11:30.08:0,30,332	0/0:14,0:14:42.11:0,42,465	1/1:2,16:18:47.98:417,48,0	1/1:3,13:16:29.97:260,30,0	1/1:0,2:2:6:52,6,0
chr10	16267423	.	T	TTATAGTTGAAATTGG	21515.99	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-4.461;DP=527;FS=51.196;HRun=0;HaplotypeScore=202.8007;InbreedingCoeff=0.9791;MQ=86.76;MQ0=0;MQRankSum=-13.737;QD=152.60;ReadPosRankSum=0.032;VQSLOD=3.2550;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,117,4960	0/0:3,0:3:9.03:0,9,364	0/0:22,0:22:63.14:0,63,2268	0/0:22,0:22:66.01:0,66,2170	0/0:17,0:17:48.16:0,48,2009	1/1:7,6:17:39.13:2451,39,0	1/1:5,6:12:27.09:2049,27,0	1/1:14,3:19:57.17:3022,57,0	1/1:1,9:13:30.10:2159,30,0	0/0:24,0:24:69.23:0,69,2952	0/0:11,0:11:23.64:0,24,971	0/0:31,0:31:93.32:0,93,4006	1/1:1,10:15:36.12:2575,36,0	1/1:3,11:15:42.14:3017,42,0	0/0:33,0:33:96.33:0,96,4380	0/0:31,0:31:90.31:0,90,4048	0/0:41,0:41:99:0,114,4797	0/0:15,0:15:39.11:0,39,1439	1/1:3,3:10:27.05:929,27,0	1/1:1,4:7:15.05:1134,15,0	1/1:3,3:11:12.04:765,12,0	1/1:1,4:7:15.05:1078,15,0	1/1:3,4:7:21.07:1306,21,0	1/1:2,4:8:15.05:1031,15,0	0/0:19,0:19:48.16:0,48,2205	0/0:35,0:35:99:0,99,4202	0/0:34,0:34:99:0,99,4064	0/0:8,0:8:21.07:0,21,935
chr10	16271527	.	CAA	C	7789.70	PASS	AB=0.962;AC=42;AF=0.750;AN=56;BaseQRankSum=7.074;DP=673;FS=7.159;HRun=13;HaplotypeScore=116.3515;InbreedingCoeff=0.8097;MQ=78.95;MQ0=5;MQRankSum=-1.775;QD=13.94;ReadPosRankSum=2.639;VQSLOD=3.5690;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:23:66.19:0,66,907	1/1:2,0:13:30.18:131,30,0	0/1:43,0:29:15.84:16,0,232	0/1:38,0:19:30.13:30,0,65	1/1:7,0:41:85.04:371,85,0	1/1:1,24:24:63.10:611,63,0	1/1:1,19:20:54.08:524,54,0	1/1:11,35:46:99:994,103,0	1/1:4,11:15:26.71:262,27,0	1/1:4,0:26:55.82:241,56,0	1/1:5,0:24:46.60:203,47,0	0/0:16,0:16:33.11:0,33,476	1/1:9,17:27:44.74:419,45,0	1/1:1,23:24:69.10:669,69,0	0/0:17,1:21:21.55:0,22,616	0/0:16,1:20:24.55:0,25,644	1/1:2,0:18:38.42:168,38,0	0/0:11,0:13:29.58:0,30,377	1/1:4,16:21:44.99:486,45,0	1/1:4,18:22:51:485,51,0	1/1:1,18:19:48.07:466,48,0	1/1:4,15:18:36.01:349,36,0	1/1:4,13:17:33.01:320,33,0	1/1:6,15:21:33.02:320,33,0	0/0:18,2:21:21.54:0,22,601	1/1:5,0:41:98.56:427,99,0	1/1:1,0:19:41.17:179,41,0	1/1:3,0:13:27.43:120,27,0
chr10	16272539	.	AT	A	6451.53	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=15.860;DP=798;FS=4.735;HRun=2;HaplotypeScore=83.9580;InbreedingCoeff=0.9996;MQ=86.41;MQ0=0;MQRankSum=-3.840;QD=35.45;ReadPosRankSum=1.835;VQSLOD=5.4537;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,126,1861	1/1:0,10:10:24.08:312,24,0	0/0:27,0:27:75.22:0,75,1061	0/0:26,0:26:77.43:0,77,1029	1/1:0,21:21:54.14:682,54,0	0/0:34,0:34:99:0,102,1507	0/0:49,0:49:99:0,147,2170	0/0:29,0:29:78.26:0,78,1165	0/0:30,0:30:90.29:0,90,1315	1/1:0,21:21:63.20:818,63,0	1/1:0,18:18:48.16:623,48,0	0/0:27,0:27:81.27:0,81,1214	0/0:36,0:36:99:0,105,1551	0/0:39,0:39:99:0,117,1735	0/0:35,0:35:99:0,105,1535	0/0:32,0:32:96.33:0,96,1438	1/1:1,29:30:75.24:974,75,0	0/0:29,0:29:78.26:0,78,1164	0/0:12,0:12:36.11:0,36,513	0/0:21,0:21:63.20:0,63,924	0/0:57,0:57:99:0,172,2540	0/0:27,0:27:81.26:0,81,1192	0/0:20,0:20:60.20:0,60,899	0/0:28,0:28:84.09:0,84,1172	0/0:14,0:14:42.13:0,42,610	1/1:1,40:41:99:1525,120,0	1/1:0,25:25:72.23:935,72,0	1/1:0,16:16:45.15:584,45,0
chr10	16273344	.	TA	T	6503.29	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=16.286;DP=803;FS=2.142;HRun=4;HaplotypeScore=86.9378;InbreedingCoeff=0.9996;MQ=84.58;MQ0=0;MQRankSum=-6.423;QD=31.72;ReadPosRankSum=0.786;VQSLOD=5.2377;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,126,1722	1/1:0,17:17:48.15:574,48,0	0/0:30,0:29:84.25:0,84,1144	0/0:23,0:23:64.96:0,65,840	1/1:2,23:25:63.06:730,63,0	0/0:26,0:26:75.25:0,75,1049	0/0:30,0:30:87.28:0,87,1202	0/0:37,0:37:99:0,99,1349	0/0:37,0:37:99:0,111,1545	1/1:1,26:27:78.24:935,78,0	1/1:3,17:20:51.15:606,51,0	0/0:34,0:34:99:0,99,1355	0/0:34,0:34:99:0,99,1370	0/0:37,0:37:99:0,106,1424	0/0:32,0:32:96.31:0,96,1328	0/0:39,0:39:99:0,117,1590	1/1:0,34:34:84.26:1008,84,0	0/0:26,0:26:75.23:0,75,1032	0/0:15,0:15:45.15:0,45,630	0/0:28,0:28:75.24:0,75,1033	0/0:26,0:26:75.22:0,75,1016	0/0:27,0:27:78.26:0,78,1082	0/0:12,0:12:36.12:0,36,504	0/0:27,0:27:81.27:0,81,1132	0/0:31,0:31:93.30:0,93,1284	1/1:3,29:32:87.21:997,87,0	1/1:3,38:41:99:1365,114,0	1/1:0,9:9:24.07:288,24,0
chr10	16273988	.	AT	A	7204.64	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=16.116;DP=746;FS=0.000;HRun=3;HaplotypeScore=69.4508;InbreedingCoeff=0.9986;MQ=66.84;MQ0=0;MQRankSum=1.976;QD=34.97;ReadPosRankSum=3.711;VQSLOD=5.4004;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:78.22:0,78,1100	1/1:0,7:7:18.06:223,18,0	0/0:28,0:27:69.22:0,69,963	0/0:27,0:27:81.24:0,81,1130	1/1:0,33:33:96.30:1190,96,0	0/0:25,0:25:72.20:0,72,996	0/0:21,0:21:63.21:0,63,906	0/0:48,0:48:99:0,138,1972	0/0:31,0:31:90.30:0,90,1293	1/1:3,29:32:87.24:1044,87,0	1/1:0,21:21:63.20:781,63,0	0/0:28,0:28:84.27:0,84,1192	0/0:26,0:26:75.25:0,75,1076	0/0:22,0:22:60.20:0,60,863	0/0:34,0:34:99:0,102,1415	0/0:27,0:27:81.26:0,81,1148	1/1:0,23:23:60.19:744,60,0	0/0:19,0:19:54.18:0,54,777	0/0:20,0:20:48.14:0,48,645	0/0:33,0:33:99:0,99,1370	0/0:25,0:25:72.23:0,72,1018	0/0:27,0:27:75.23:0,75,1042	0/0:38,0:38:99:0,111,1581	0/0:18,0:18:48.16:0,48,691	0/0:17,0:17:48.15:0,48,674	1/1:0,30:30:90.27:1102,90,0	1/1:2,40:42:99:1451,117,0	1/1:0,18:18:54.17:669,54,0
chr10	16275626	.	G	GAA	11822.10	PASS	AB=0.778;AC=40;AF=0.714;AN=56;BaseQRankSum=-8.350;DP=665;FS=10.568;HRun=9;HaplotypeScore=83.4122;InbreedingCoeff=0.7951;MQ=63.15;MQ0=9;MQRankSum=0.205;QD=24.58;ReadPosRankSum=0.060;VQSLOD=3.4158;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:33:89.60:0,90,906	1/1:1,2:4:6.02:82,6,0	0/1:43,0:18:11.33:11,0,199	0/0:37,0:21:5.37:0,5,298	1/1:8,24:33:75.12:1051,75,0	1/1:5,18:24:39.13:583,39,0	1/1:3,13:17:28.63:398,29,0	1/1:10,19:30:60.45:778,60,0	1/1:5,9:15:36.11:531,36,0	1/1:6,17:25:55.12:684,55,0	1/1:4,21:23:53.92:744,54,0	0/0:17,0:17:48.10:0,48,510	0/1:4,15:19:1.94:355,0,2	1/1:2,12:15:30.10:462,30,0	0/0:26,0:26:75.17:0,75,789	0/0:22,0:22:57.12:0,57,606	1/1:4,27:33:57.52:805,58,0	0/0:26,0:27:56.19:0,56,651	1/1:5,12:19:9.68:485,10,0	1/1:5,18:23:50.62:698,51,0	1/1:3,11:15:26.58:368,27,0	1/1:5,14:20:45:626,45,0	1/1:3,21:24:42.07:615,42,0	1/1:2,17:19:42.14:646,42,0	0/0:21,0:21:57.12:0,57,605	1/1:6,19:25:54.09:749,54,0	1/1:3,21:27:50.64:713,51,0	1/1:2,17:19:4.19:437,4,0
chr10	16275961	.	C	CTTT	3919.83	PASS	AB=0.657;AC=46;AF=0.821;AN=56;BaseQRankSum=-0.116;DP=491;FS=2.394;HRun=14;HaplotypeScore=84.8007;InbreedingCoeff=0.2440;MQ=64.99;MQ0=2;MQRankSum=0.260;QD=8.58;ReadPosRankSum=-1.275;VQSLOD=0.1752;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:13,0:30:3.67:10,0,4	1/1:2,0:7:11.92:87,12,0	0/0:9,0:8:2.75:0,3,19	0/0:11,0:6:0.55:0,1,62	1/1:5,0:20:27.98:188,28,0	1/1:0,6:11:6:75,6,0	1/1:6,8:17:11.99:176,12,0	1/1:23,6:30:29.64:264,30,0	1/1:3,1:12:8.97:95,9,0	1/1:7,0:17:23.72:192,24,0	1/1:6,0:23:29.55:194,30,0	0/0:6,0:14:0.36:0,0,51	1/1:9,10:22:20.98:261,21,0	1/1:4,6:12:8.93:91,9,0	1/1:10,0:22:8.72:19,9,0	1/1:1,0:14:11.73:58,12,0	1/1:4,0:28:2.08:195,2,0	1/1:4,0:15:7.95:16,8,0	1/1:8,8:21:38.99:459,39,0	1/1:6,11:20:34.31:287,34,0	0/1:6,5:10:21.78:96,0,22	1/1:4,8:12:34.86:353,35,0	1/1:4,6:13:18.40:205,18,0	1/1:12,0:12:12.50:180,13,0	0/1:10,0:31:15.40:15,0,75	0/1:9,2:17:4.53:162,0,5	1/1:7,0:17:11:74,11,0	1/1:3,1:13:20.38:165,20,0
chr10	16277656	.	TCACACACACACACACACACACACACACACACACA	T	2767	PASS	AB=0.641;AC=15;AF=0.268;AN=56;BaseQRankSum=4.241;DP=504;FS=31.071;HRun=0;HaplotypeScore=383.9801;InbreedingCoeff=0.8178;MQ=73.05;MQ0=7;MQRankSum=-1.035;QD=23.06;ReadPosRankSum=0.664;VQSLOD=0.4645;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:33.58:0,34,2457	1/1:7,0:7:8.99:119,9,0	0/0:31,0:25:21.06:0,21,407	0/0:25,0:18:33.08:0,33,981	1/1:6,12:19:18.06:448,18,0	0/0:16,0:21:33.58:0,34,2588	0/0:22,0:30:34.65:0,35,2323	0/0:24,0:24:51.15:0,51,1926	0/0:16,0:21:27.08:0,27,1488	0/1:11,14:25:10.86:617,0,11	1/1:3,10:13:9.03:509,9,0	0/0:11,0:13:18.06:0,18,1493	0/0:13,0:16:30.10:0,30,2461	0/0:12,0:13:24.06:0,24,1496	0/0:18,0:25:23.08:0,23,1499	0/0:16,0:17:24.07:0,24,1539	1/1:7,13:20:3.48:261,3,0	0/0:13,0:14:33.08:0,33,2076	0/0:12,0:12:15.04:0,15,819	0/0:5,0:5:3.01:0,3,226	0/0:33,0:31:51.16:0,51,3309	0/0:13,0:16:17.24:0,17,967	0/0:11,0:10:24.07:0,24,944	0/0:15,0:20:15.04:0,15,681	0/0:9,0:13:15.05:0,15,1155	1/1:15,0:16:25:566,25,0	1/1:14,0:14:24.03:262,24,0	1/1:6,0:5:14.96:171,15,0
chr10	16280748	.	C	CTT	5593.79	PASS	AB=0.717;AC=49;AF=0.875;AN=56;BaseQRankSum=-0.569;DP=473;FS=19.317;HRun=13;HaplotypeScore=71.2771;InbreedingCoeff=0.1985;MQ=55.23;MQ0=11;MQRankSum=1.283;QD=12.11;ReadPosRankSum=1.834;VQSLOD=1.9198;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,1:18:26.28:129,26,0	1/1:4,7:11:17.60:224,18,0	0/1:15,0:10:0.47:0,0,19	0/0:8,0:10:3.03:0,3,46	1/1:10,19:27:35.93:390,36,0	1/1:3,12:16:20.56:253,21,0	1/1:6,13:18:8.64:322,9,0	0/1:12,4:16:13.65:163,0,14	1/1:10,4:11:22.99:225,23,0	1/1:6,13:19:33.78:366,34,0	1/1:4,0:4:5.50:46,6,0	0/1:7,0:14:11.04:30,0,11	1/1:5,2:5:6.02:81,6,0	1/1:7,9:14:15.05:198,15,0	1/1:5,0:18:6.93:46,7,0	1/1:4,0:15:22.46:78,22,0	1/1:15,18:33:41.55:477,42,0	0/1:9,0:23:58.69:74,0,59	1/1:5,3:8:14.07:156,14,0	1/1:10,11:20:17.45:170,17,0	0/1:0,4:5:0.20:81,0,0	1/1:4,15:19:35.55:435,36,0	1/1:9,11:22:32.50:363,33,0	1/1:5,7:12:15:182,15,0	1/1:9,1:21:28.76:148,29,0	1/1:5,12:18:38.50:411,38,0	1/1:6,14:20:33:394,33,0	1/1:0,5:6:11.62:150,12,0
chr10	16284560	.	C	CCTT	1956.54	PASS	AB=0.588;AC=27;AF=0.587;AN=46;BaseQRankSum=-1.233;DP=394;FS=56.722;HRun=0;HaplotypeScore=42.5690;InbreedingCoeff=0.7347;MQ=51.19;MQ0=24;MQRankSum=-6.651;QD=12.96;ReadPosRankSum=-1.002;VQSLOD=0.7369;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:75.14:0,75,1073	./.	0/0:20,0:14:36.10:0,36,508	0/0:22,0:14:24.08:0,24,355	1/1:0,13:10:18.02:344,18,0	1/1:1,11:4:6.02:130,6,0	1/1:5,11:6:6.02:129,6,0	0/0:21,2:15:6.02:0,6,94	1/1:2,6:3:5.98:85,6,0	1/1:5,4:8:12.03:220,12,0	1/1:2,6:7:2.92:17,3,0	0/0:20,0:20:39.13:0,39,608	./.	1/1:1,7:3:5.97:84,6,0	0/0:22,0:22:45.13:0,45,683	0/0:27,0:27:51.16:0,51,775	./.	0/0:17,0:17:42.13:0,42,630	1/1:5,6:3:6.02:130,6,0	1/1:5,9:11:20.99:364,21,0	0/1:3,7:4:11.98:12,0,40	1/1:2,6:7:8.95:146,9,0	1/1:0,7:6:8.94:105,9,0	./.	0/0:21,0:21:30.07:0,30,423	1/1:2,14:7:15.02:243,15,0	1/1:0,7:4:6.02:130,6,0	./.
chr10	16287680	.	A	ATGTGTGTGTGTGTG	1578.62	PASS	AB=1.000;AC=26;AF=0.650;AN=40;BaseQRankSum=1.712;DP=286;FS=3.443;HRun=0;HaplotypeScore=87.2875;InbreedingCoeff=0.4421;MQ=51.14;MQ0=9;MQRankSum=-3.598;QD=9.63;ReadPosRankSum=-3.248;VQSLOD=0.9543;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:8,0:8:27.51:28,0,179	./.	0/1:27,0:15:9.86:10,0,81	0/0:16,0:8:2.80:0,3,80	1/1:7,0:7:2.99:24,3,0	1/1:4,0:4:2.99:24,3,0	1/1:14,0:14:6:142,6,0	1/1:22,0:19:17.08:385,17,0	1/1:12,0:12:3.01:118,3,0	1/1:9,0:7:6.02:154,6,0	./.	0/0:8,0:8:9.03:0,9,216	./.	1/1:7,0:7:3.48:49,3,0	0/0:11,0:10:15.04:0,15,407	0/0:9,0:9:9.02:0,9,173	1/1:16,7:21:5.81:246,6,0	0/0:22,0:19:27.05:0,27,798	1/1:8,0:8:12.88:98,13,0	./.	./.	./.	1/1:7,0:6:2.99:24,3,0	./.	0/0:8,0:8:6.02:0,6,219	./.	1/1:10,0:10:14.97:415,15,0	1/1:6,0:2:1.55:4,2,0
chr10	16288489	.	T	TGTGC	9100.51	PASS	AB=0.920;AC=27;AF=0.482;AN=56;BaseQRankSum=15.053;DP=664;FS=2.390;HRun=0;HaplotypeScore=166.7580;InbreedingCoeff=0.9242;MQ=79.57;MQ0=0;MQRankSum=-14.800;QD=32.97;ReadPosRankSum=-1.415;VQSLOD=4.7779;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:44:99:0,126,2574	0/0:11,0:11:33.11:0,33,688	0/0:28,0:28:70.57:0,71,1424	0/0:20,0:19:54.13:0,54,1048	0/0:26,0:26:75.24:0,75,1528	1/1:3,16:15:39.13:915,39,0	1/1:3,18:19:50.72:921,51,0	1/1:1,8:5:15.05:371,15,0	1/1:0,16:16:44.75:871,45,0	0/0:31,0:31:90.30:0,90,1797	0/0:11,0:11:30.09:0,30,592	0/0:26,0:26:75.26:0,75,1548	1/1:5,28:26:62.76:1218,63,0	1/1:5,28:29:66.60:1108,67,0	0/0:33,0:33:93.30:0,93,1888	0/1:21,2:23:68.84:69,0,1202	0/0:51,0:51:99:0,151,3122	0/0:33,0:33:93.31:0,93,1893	1/1:3,7:9:27.08:562,27,0	1/1:1,13:14:26.97:513,27,0	1/1:6,25:31:18.11:274,18,0	1/1:1,10:12:26.94:508,27,0	1/1:2,11:13:35.46:671,35,0	1/1:6,16:20:32.02:583,32,0	1/1:3,14:17:26.90:518,27,0	0/0:40,0:40:99:0,120,2503	0/0:25,0:25:75.26:0,75,1556	0/0:8,0:8:24.07:0,24,465
chr10	16288491	.	T	TG	4542.72	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=19.473;DP=653;FS=2.275;HRun=0;HaplotypeScore=147.8220;InbreedingCoeff=0.9902;MQ=81.14;MQ0=0;MQRankSum=-17.674;QD=18.62;ReadPosRankSum=-4.131;VQSLOD=4.8351;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:42:99:0,126,1760	0/0:11,0:11:33.10:0,33,447	0/0:30,0:30:83.90:0,84,1065	0/0:20,0:19:48.61:0,49,640	0/0:25,0:25:72.24:0,72,1007	1/1:4,16:17:37.97:310,38,0	1/1:1,18:17:50.65:479,51,0	1/1:3,8:7:12.44:122,12,0	1/1:1,17:17:47.63:456,48,0	0/0:28,0:28:84.27:0,84,1146	0/0:11,0:11:33.10:0,33,445	0/0:27,0:27:75.24:0,75,1034	1/1:0,33:26:67.74:586,68,0	1/1:3,29:27:72.48:650,72,0	0/0:34,0:34:99:0,99,1314	0/0:20,2:22:11.32:0,11,784	0/0:52,0:52:99:0,156,2160	0/0:33,0:33:96.26:0,96,1302	1/1:3,7:9:27.02:266,27,0	1/1:0,13:13:36.99:271,37,0	1/1:3,25:27:39.71:281,40,0	1/1:1,11:12:29.16:245,29,0	1/1:1,11:12:35.57:324,36,0	1/1:2,16:16:31.20:232,31,0	1/1:0,17:17:42.62:321,43,0	0/0:41,0:41:99:0,120,1646	0/0:25,0:25:75.25:0,75,1046	0/0:7,0:7:21.07:0,21,294
chr10	16289108	.	T	TCTCC	9003.03	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=11.336;DP=598;FS=13.555;HRun=0;HaplotypeScore=110.0400;InbreedingCoeff=0.9952;MQ=60.93;MQ0=3;MQRankSum=-12.341;QD=37.20;ReadPosRankSum=-1.698;VQSLOD=3.7786;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:30:63.91:0,64,1058	0/0:5,0:5:15.05:0,15,244	0/0:27,0:21:38.94:0,39,518	0/0:33,0:16:24.08:0,24,377	0/0:20,0:20:51.17:0,51,862	1/1:20,0:20:48.16:952,48,0	1/1:17,1:17:39.05:828,39,0	1/1:26,1:27:38.99:609,39,0	1/1:14,1:15:27.08:511,27,0	0/0:35,0:35:81.26:0,81,1285	0/0:21,0:21:51.10:0,51,764	0/0:21,0:21:51.15:0,51,800	1/1:29,1:30:48.16:946,48,0	1/1:14,1:15:39.08:678,39,0	0/0:28,0:28:69.21:0,69,1120	0/0:21,0:21:51.17:0,51,862	0/0:32,0:31:93.17:0,93,1460	0/0:12,0:12:27.09:0,27,440	1/1:11,0:11:21.07:351,21,0	1/1:18,0:18:38.62:618,39,0	1/1:12,0:12:18.03:274,18,0	1/1:17,1:18:40.90:761,41,0	1/1:17,0:17:42.13:784,42,0	1/1:11,1:11:24.08:420,24,0	1/1:28,1:29:66.22:1270,66,0	0/0:24,0:24:54.18:0,54,905	0/0:30,0:30:60.18:0,60,965	0/0:14,0:14:39.09:0,39,586
chr10	16289118	.	T	TC	5730.83	PASS	AB=0.678;AC=20;AF=0.357;AN=56;BaseQRankSum=13.395;DP=635;FS=10.342;HRun=3;HaplotypeScore=91.7215;InbreedingCoeff=0.6031;MQ=54.74;MQ0=9;MQRankSum=-12.648;QD=22.65;ReadPosRankSum=0.609;VQSLOD=3.4832;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:31:65.87:0,66,913	0/0:7,0:7:18.06:0,18,223	0/0:34,0:20:44.93:0,45,492	0/0:38,0:14:27.08:0,27,335	0/0:24,0:24:69.13:0,69,846	1/1:8,16:23:31.17:639,31,0	0/1:7,14:20:2.35:423,0,2	0/1:20,7:26:99:348,0,101	1/1:9,6:15:23.15:323,23,0	0/0:31,0:31:87.27:0,87,1078	0/0:22,0:22:60.19:0,60,741	0/0:23,0:23:63.19:0,63,769	1/1:10,16:26:48.07:649,48,0	0/1:11,10:21:16.37:397,0,16	0/0:36,0:35:84.26:0,84,1036	0/0:21,0:21:60.19:0,60,743	0/0:37,0:36:99:0,102,1247	0/0:13,0:13:39.12:0,39,482	0/1:4,5:9:46.95:230,0,47	0/1:15,9:24:70.11:385,0,70	0/1:4,6:10:0.92:155,0,1	1/1:7,12:19:37.03:461,37,0	1/1:5,13:18:42.12:567,42,0	1/1:4,7:10:21.05:278,21,0	1/1:8,20:28:60.77:875,61,0	0/0:23,0:23:63.20:0,63,780	0/0:26,0:26:69.21:0,69,847	0/0:14,0:14:39.08:0,39,451
chr10	16289126	.	CT	C	3144.50	PASS	AB=0.783;AC=22;AF=0.393;AN=56;BaseQRankSum=14.254;DP=633;FS=18.610;HRun=2;HaplotypeScore=98.7607;InbreedingCoeff=0.6689;MQ=47.04;MQ0=19;MQRankSum=-12.892;QD=12.73;ReadPosRankSum=0.613;VQSLOD=1.3258;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:30:75.25:0,75,1115	0/0:8,0:7:18.06:0,18,268	0/0:30,0:10:24.08:0,24,358	0/0:36,0:12:27.09:0,27,401	0/0:24,0:24:66.13:0,66,967	0/1:11,14:24:9.67:443,0,10	1/1:10,10:19:25.80:305,26,0	0/1:18,3:20:5.54:172,0,6	1/1:11,6:16:14.47:242,14,0	0/0:32,0:32:91.83:0,92,1322	0/0:24,0:23:54.18:0,54,810	0/0:22,0:22:56.66:0,57,877	1/1:12,13:25:22.28:419,22,0	1/1:13,7:20:6.46:243,6,0	0/0:36,0:35:96.23:0,96,1352	0/0:21,0:20:60.20:0,60,893	0/0:39,0:38:99:0,105,1527	0/0:16,0:14:39.02:0,39,553	0/1:6,1:7:30.38:62,0,30	0/1:15,8:23:31.16:243,0,31	1/1:9,1:9:6.31:67,6,0	1/1:10,10:20:25.61:303,26,0	1/1:13,9:22:7.42:287,7,0	1/1:8,3:10:8.67:83,9,0	1/1:13,13:26:40.54:480,41,0	0/0:24,0:24:72.01:0,72,1017	0/0:27,0:25:68.88:0,69,964	0/0:16,0:16:29.36:0,29,485
chr10	16289129	.	CT	C	3504.76	PASS	AB=0.987;AC=23;AF=0.411;AN=56;BaseQRankSum=15.659;DP=627;FS=23.143;HRun=3;HaplotypeScore=95.3717;InbreedingCoeff=0.7328;MQ=46.35;MQ0=21;MQRankSum=-13.610;QD=14.31;ReadPosRankSum=-2.281;VQSLOD=1.4906;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:30:75.19:0,75,1011	0/0:7,0:6:18.06:0,18,259	0/0:28,0:9:24.08:0,24,336	0/0:34,0:11:18.06:0,18,259	0/0:23,0:23:66.14:0,66,950	0/1:24,1:24:5.73:452,0,6	1/1:21,0:19:36.04:308,36,0	1/1:19,1:19:15.26:193,15,0	1/1:16,1:16:26.71:265,27,0	0/0:32,1:32:76.36:0,76,1293	0/0:20,3:22:54.20:0,54,802	0/0:22,0:22:30.57:0,31,709	1/1:24,1:25:37.72:428,38,0	1/1:20,0:20:29.82:305,30,0	0/0:34,0:33:84.24:0,84,1185	0/0:20,1:20:60.20:0,60,864	0/0:40,0:38:99:0,99,1387	0/0:16,0:14:37.01:0,37,520	0/1:7,0:7:25.30:77,0,25	0/1:24,0:24:11.44:251,0,11	1/1:9,0:8:5.11:55,5,0	1/1:19,1:20:18.61:299,19,0	1/1:21,2:23:17.27:306,17,0	1/1:7,2:8:9.39:83,9,0	1/1:22,3:25:48.40:481,48,0	0/0:24,2:26:29.84:0,30,902	0/0:21,6:25:26.90:0,27,850	0/0:12,2:14:0.39:0,0,434
chr10	16289134	.	T	TTC	4659.54	PASS	AB=0.995;AC=34;AF=0.607;AN=56;BaseQRankSum=15.047;DP=637;FS=56.071;HRun=0;HaplotypeScore=100.6636;InbreedingCoeff=0.4023;MQ=43.45;MQ0=27;MQRankSum=-15.345;QD=10.79;ReadPosRankSum=-6.908;VQSLOD=1.6686;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:28:58.64:0,59,808	0/1:10,0:9:96.99:97,0,221	0/0:26,0:7:21.06:0,21,275	0/0:30,0:8:18.06:0,18,249	0/0:29,0:28:39.95:0,40,876	1/1:22,6:27:31.58:445,32,0	1/1:22,0:20:32.57:287,33,0	1/1:19,0:18:45.06:507,45,0	1/1:12,6:17:31.60:264,32,0	0/1:37,0:35:99:169,0,1044	0/1:25,0:24:31.13:31,0,662	0/1:21,1:22:99:120,0,624	1/1:18,9:26:45.91:362,46,0	1/1:20,1:20:51.71:503,52,0	0/0:33,0:32:58.10:0,58,1025	0/0:21,0:20:60.10:0,60,780	0/0:36,0:34:91.83:0,92,1236	0/1:17,0:15:0.95:1,0,398	1/1:12,0:11:17.67:184,18,0	1/1:15,12:25:0.46:301,0,0	1/1:9,0:8:14.95:151,15,0	1/1:13,6:19:18.32:216,18,0	1/1:11,11:22:42.17:386,42,0	1/1:8,0:8:9.87:78,10,0	1/1:17,5:22:47.70:387,48,0	0/1:25,0:25:9.91:10,0,749	0/1:28,0:23:60.62:61,0,720	0/1:14,0:14:99:100,0,375
chr10	16289259	.	CTG	C	2322.57	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=10.568;DP=418;FS=4.290;HRun=0;HaplotypeScore=73.9868;InbreedingCoeff=0.9311;MQ=58.38;MQ0=9;MQRankSum=-0.469;QD=12.22;ReadPosRankSum=-0.253;VQSLOD=2.8453;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:21:44.79:0,45,373	0/0:4,0:4:11.98:0,12,121	0/0:16,0:10:17.18:0,17,205	0/0:19,0:9:24.37:0,24,206	1/1:18,0:18:32.87:270,33,0	1/1:14,0:13:17.87:135,18,0	1/1:14,0:13:17.91:139,18,0	1/1:2,10:12:29.97:254,30,0	1/1:9,0:9:7.94:72,8,0	0/0:29,0:29:72.05:0,72,674	0/0:12,0:12:20.95:0,21,167	0/0:19,0:19:38.75:0,39,318	1/1:16,0:15:20.86:159,21,0	1/1:11,0:11:16.10:113,16,0	0/0:22,0:22:36.83:0,37,325	0/0:7,0:7:14.99:0,15,131	0/0:18,0:17:27.72:0,28,239	0/0:17,0:15:29.83:0,30,246	1/1:2,6:7:17.96:146,18,0	1/1:16,0:14:32.90:265,33,0	1/1:10,0:10:9.88:76,10,0	1/1:16,0:16:35.96:297,36,0	1/1:0,9:9:2.73:17,3,0	1/1:15,0:13:32.89:260,33,0	1/1:22,0:21:37.69:345,38,0	0/0:17,0:17:35.97:0,36,308	0/0:15,0:15:35.55:0,36,316	0/0:11,0:11:6.49:0,6,126
chr10	16292701	.	CAGGGAGGG	C	1910.56	PASS	AB=0.986;AC=19;AF=0.432;AN=44;BaseQRankSum=-1.184;DP=281;FS=14.725;HRun=0;HaplotypeScore=88.2734;InbreedingCoeff=-0.0261;MQ=71.60;MQ0=3;MQRankSum=-2.084;QD=9.01;ReadPosRankSum=2.608;VQSLOD=0.8792;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:7:6.02:0,6,170	./.	0/1:8,0:6:0:0,0,0	0/0:11,0:10:3.01:0,3,44	0/0:7,0:7:3.01:0,3,76	0/1:13,1:14:37.09:218,0,37	1/1:23,0:23:3.66:152,4,0	1/1:11,4:13:11.95:155,12,0	0/1:17,0:17:34.01:356,0,34	./.	0/0:4,0:4:0:0,0,0	0/0:8,0:8:3.01:0,3,91	0/1:15,1:16:11.06:202,0,11	0/1:17,0:17:43.35:211,0,43	0/0:6,0:5:6.02:0,6,141	./.	0/0:9,0:9:9.03:0,9,246	0/1:7,0:7:58.02:58,0,59	0/1:9,0:8:35.97:36,0,39	0/1:11,0:11:12.95:64,0,13	1/1:22,0:22:5.21:92,5,0	0/1:8,0:8:11.98:18,0,12	./.	1/1:21,5:26:2.68:66,3,0	1/1:19,0:18:6.10:416,6,0	./.	0/0:4,0:4:9.03:0,9,185	./.
chr10	16292722	.	A	AGG	1831.93	PASS	AB=0.802;AC=17;AF=0.340;AN=50;BaseQRankSum=0.756;DP=231;FS=1.564;HRun=3;HaplotypeScore=71.1408;InbreedingCoeff=-0.2036;MQ=54.85;MQ0=12;MQRankSum=-2.765;QD=11.24;ReadPosRankSum=5.014;VQSLOD=0.6848;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:5:12.04:0,12,166	./.	0/0:13,0:6:3.89:0,4,29	0/0:18,0:9:2.52:0,3,60	0/0:4,0:3:8.97:0,9,87	0/1:7,8:14:24.97:201,0,25	0/1:9,8:17:45.06:176,0,45	0/1:17,0:14:69.90:70,0,83	0/1:4,9:13:35.98:374,0,36	./.	0/1:1,0:1:0:0,0,0	0/0:4,0:4:7.35:0,7,88	0/1:8,5:13:31.79:281,0,32	0/1:9,7:16:99:174,0,112	0/0:6,0:4:9.03:0,9,124	0/0:2,0:2:6.01:0,6,68	0/0:3,0:3:9.03:0,9,126	0/1:3,1:4:41.71:42,0,91	0/1:3,4:6:43.35:164,0,43	0/1:5,3:8:27.55:45,0,28	0/1:11,1:11:4.77:67,0,5	0/1:5,0:5:17.89:18,0,20	0/1:7,0:7:0.26:0,0,1	1/1:14,1:15:2.67:52,3,0	1/1:3,10:12:1.60:304,2,0	./.	0/0:6,0:5:12.01:0,12,164	0/0:1,0:1:2.99:0,3,23
chr10	16293793	.	T	TGATATTATTGCTATTCTGAGTAGTTCT	70996.27	PASS	AB=0.692;AC=55;AF=0.982;AN=56;BaseQRankSum=-1.044;DP=312;FS=11.292;HRun=0;HaplotypeScore=265.0595;InbreedingCoeff=-0.0233;MQ=64.46;MQ0=0;MQRankSum=-2.780;QD=227.55;ReadPosRankSum=2.393;VQSLOD=3.3973;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:14:36.12:2696,36,0	1/1:5,0:5:12.04:569,12,0	1/1:2,0:6:18.03:785,18,0	0/1:5,1:9:26.16:1078,0,26	1/1:16,0:16:45.14:3147,45,0	1/1:19,0:19:54.14:3727,54,0	1/1:15,0:15:45.15:3610,45,0	1/1:15,0:15:45.15:3362,45,0	1/1:9,0:9:27.09:2804,27,0	1/1:18,0:18:54.19:4362,54,0	1/1:8,0:8:18.06:1420,18,0	1/1:13,0:13:39.13:3601,39,0	1/1:10,0:10:30.10:2437,30,0	1/1:11,0:11:33.11:3219,33,0	1/1:7,0:7:21.07:1812,21,0	1/1:8,0:8:24.08:2307,24,0	1/1:9,0:9:27.09:2520,27,0	1/1:6,0:6:18.06:1504,18,0	1/1:15,0:15:45.15:3765,45,0	1/1:10,0:10:30.10:2176,30,0	1/1:4,0:4:9.03:541,9,0	1/1:12,0:12:30.10:2464,30,0	1/1:9,0:9:21.07:1849,21,0	1/1:9,0:9:18.06:1272,18,0	1/1:11,0:11:30.10:2793,30,0	1/1:21,0:21:63.17:5279,63,0	1/1:17,0:17:51.16:4350,51,0	1/1:6,0:6:18.06:1547,18,0
chr10	16294252	.	TGGG	T	6534.93	PASS	AB=0.714;AC=27;AF=0.500;AN=54;BaseQRankSum=-2.970;DP=365;FS=13.766;HRun=11;HaplotypeScore=69.2250;InbreedingCoeff=0.7947;MQ=84.02;MQ0=5;MQRankSum=-3.738;QD=27.23;ReadPosRankSum=8.333;VQSLOD=1.4825;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:21.07:0,21,386	0/0:2,0:2:5.99:0,6,83	0/0:31,0:21:30.41:0,30,524	0/0:19,0:16:25.93:0,26,323	0/0:9,0:9:12.03:0,12,193	1/1:1,20:21:54.17:705,54,0	1/1:3,13:16:27.07:354,27,0	1/1:5,13:18:33.05:408,33,0	1/1:1,13:14:39.12:512,39,0	0/0:2,0:2:3.01:0,3,39	0/0:1,0:1:3:0,3,25	./.	1/1:7,15:22:42.12:550,42,0	1/1:1,21:22:51.16:670,51,0	0/0:4,0:4:9.03:0,9,160	0/1:6,1:10:15.42:15,0,207	0/0:11,0:11:18.06:0,18,290	0/0:9,0:9:18.05:0,18,302	1/1:6,12:19:36:451,36,0	1/1:0,11:11:27.07:354,27,0	1/1:2,25:27:54.15:708,54,0	1/1:0,13:14:42.07:529,42,0	1/1:2,16:19:45.08:570,45,0	1/1:2,16:18:29.66:393,30,0	1/1:0,9:9:24.08:315,24,0	0/0:7,0:7:2.97:0,3,20	0/0:9,0:9:15.03:0,15,234	0/0:3,0:3:2.84:0,3,14
chr10	16296311	.	GCC	G	6531.69	PASS	AB=0.522;AC=27;AF=0.482;AN=56;BaseQRankSum=-3.482;DP=517;FS=13.449;HRun=11;HaplotypeScore=75.1180;InbreedingCoeff=0.8716;MQ=73.63;MQ0=1;MQRankSum=-0.079;QD=22.68;ReadPosRankSum=3.335;VQSLOD=2.8221;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:25:50.51:0,51,702	0/0:1,0:5:9.98:0,10,34	0/0:12,0:12:20.54:0,21,244	0/0:10,0:10:17.53:0,18,201	0/0:4,0:14:25.49:0,25,96	1/1:8,16:25:48.09:510,48,0	1/1:2,34:38:78.12:885,78,0	1/1:1,13:14:36.08:383,36,0	1/1:3,18:22:53.86:555,54,0	0/0:3,1:16:1.02:0,1,71	0/0:1,0:7:6.71:0,7,24	0/0:15,0:17:32.55:0,33,389	1/1:4,15:20:41.84:427,42,0	1/1:1,19:20:54.12:575,54,0	0/0:14,0:16:29.55:0,30,363	0/0:16,0:15:36.09:0,36,492	0/0:8,0:33:55.41:0,55,226	0/0:23,1:30:32.69:0,33,737	1/1:4,17:22:42.01:500,42,0	1/1:2,12:14:33.08:350,33,0	1/1:5,32:37:72.16:766,72,0	1/1:2,15:17:39.04:397,39,0	1/1:1,8:9:17.73:191,18,0	1/1:2,19:21:45.11:479,45,0	1/1:1,16:16:42.11:447,42,0	0/1:1,3:12:39.92:67,0,40	0/0:3,0:13:14.97:0,15,51	0/0:5,0:14:20.19:0,20,82
chr10	16296696	.	CTCTGCTCTCTGCCT	C	13329.62	PASS	AB=0.923;AC=27;AF=0.482;AN=56;BaseQRankSum=15.904;DP=707;FS=3.935;HRun=0;HaplotypeScore=268.7645;InbreedingCoeff=0.9208;MQ=75.95;MQ0=0;MQRankSum=-14.096;QD=42.86;ReadPosRankSum=1.261;VQSLOD=4.3138;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,138,8516	0/1:11,1:12:94.79:95,0,1342	0/0:35,0:33:71.40:0,71,3492	0/0:24,0:24:60.21:0,60,2935	0/0:23,0:23:57.20:0,57,3812	1/1:3,17:20:24.08:977,24,0	1/1:17,21:38:27.09:1084,27,0	1/1:9,13:22:38.88:596,39,0	1/1:4,10:14:24.08:978,24,0	0/0:36,0:36:96.33:0,96,6019	0/0:10,0:10:12.04:0,12,820	0/0:23,0:23:57.20:0,57,3334	1/1:5,18:23:24.08:978,24,0	1/1:2,20:22:27.09:1084,27,0	0/0:34,0:34:81.28:0,81,4829	0/0:34,0:34:96.33:0,96,6152	0/0:39,0:39:99:0,108,6914	0/0:20,0:20:54.19:0,54,3587	1/1:7,13:20:41.98:926,42,0	1/1:5,10:15:27.09:1100,27,0	1/1:7,16:23:21.07:737,21,0	1/1:7,22:29:39.13:1590,39,0	1/1:4,23:27:38.63:1538,39,0	1/1:11,16:27:17.70:666,18,0	1/1:3,16:19:24.08:978,24,0	0/0:32,0:32:81.28:0,81,4741	0/0:25,0:25:72.25:0,72,4404	0/0:9,0:9:27.09:0,27,1840
chr10	16297642	.	C	CTCCCTCAGCCCTTT	19743.85	PASS	AB=0.900;AC=55;AF=0.982;AN=56;BaseQRankSum=1.668;DP=194;FS=28.234;HRun=0;HaplotypeScore=241.7311;InbreedingCoeff=-0.0538;MQ=76.48;MQ0=0;MQRankSum=-3.059;QD=101.77;ReadPosRankSum=2.776;VQSLOD=3.1213;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,0:12:30.10:1678,30,0	1/1:2,0:2:6.02:345,6,0	1/1:2,2:6:15.05:976,15,0	0/1:8,1:9:63.08:713,0,63	1/1:14,0:14:26.88:1226,27,0	1/1:4,0:3:6.02:386,6,0	1/1:8,0:8:21.03:931,21,0	1/1:5,0:5:12.51:654,13,0	1/1:6,0:6:15.05:724,15,0	1/1:7,0:7:15.05:799,15,0	1/1:10,0:10:21.07:962,21,0	1/1:7,0:7:15.05:795,15,0	1/1:4,0:4:11.73:396,12,0	1/1:9,0:9:12.04:732,12,0	1/1:8,0:8:15.05:726,15,0	1/1:5,0:5:8.77:262,9,0	1/1:7,0:7:15.05:785,15,0	1/1:1,0:1:3.01:182,3,0	1/1:3,0:3:6.02:369,6,0	1/1:7,0:7:18.05:726,18,0	1/1:5,0:5:9.03:579,9,0	1/1:11,0:11:15.05:905,15,0	1/1:7,0:7:15.05:490,15,0	1/1:6,0:6:15.05:807,15,0	1/1:10,0:10:15.05:849,15,0	1/1:12,0:12:18.06:993,18,0	1/1:6,0:6:12.04:258,12,0	1/1:3,0:3:9.03:497,9,0
chr10	16299242	.	TGATA	T	6421.13	PASS	AC=34;AF=0.680;AN=50;BaseQRankSum=-4.383;DP=706;FS=8.639;HRun=0;HaplotypeScore=148.9633;InbreedingCoeff=0.8915;MQ=65.39;MQ0=1;MQRankSum=2.009;QD=14.90;ReadPosRankSum=2.263;VQSLOD=4.2864;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:24,22:46:57.15:837,57,0	0/0:10,0:18:27.02:0,27,497	./.	./.	0/0:32,0:39:9.02:0,9,129	1/1:15,0:15:6.02:91,6,0	1/1:19,0:19:5.93:62,6,0	./.	1/1:25,0:25:24.07:343,24,0	0/0:25,0:31:33.08:0,33,557	0/0:13,0:20:2.80:0,3,52	1/1:19,6:25:12.04:181,12,0	1/1:21,0:21:30.09:434,30,0	1/1:38,0:38:39.06:554,39,0	1/1:16,5:22:15.04:209,15,0	1/1:14,10:24:21.07:318,21,0	0/0:16,0:28:30.09:0,30,522	1/1:12,11:23:30.10:454,30,0	1/1:17,0:17:12.04:181,12,0	1/1:32,0:32:42.14:617,42,0	1/1:27,0:27:15:227,15,0	1/1:22,0:22:33.11:499,33,0	1/1:27,0:27:36.12:544,36,0	1/1:16,0:16:18.06:272,18,0	1/1:32,0:32:42.13:599,42,0	0/0:38,0:38:54.08:0,54,915	0/0:19,0:34:39.12:0,39,665	0/0:5,0:5:9.03:0,9,163
chr10	16299295	.	GAT	G	1660.75	PASS	AB=0.751;AC=11;AF=0.196;AN=56;BaseQRankSum=14.728;DP=699;FS=18.436;HRun=0;HaplotypeScore=145.4185;InbreedingCoeff=-0.2443;MQ=64.28;MQ0=14;MQRankSum=-0.434;QD=6.95;ReadPosRankSum=2.812;VQSLOD=1.9967;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:23.66:0,24,611	0/0:19,0:19:54.08:0,54,760	0/0:38,0:19:57.19:0,57,813	0/0:22,0:9:27.09:0,27,383	0/0:26,0:25:39.12:0,39,577	0/1:11,3:13:6.35:6,0,175	0/0:17,2:19:8.91:0,9,251	0/0:41,0:37:98.15:0,98,611	0/1:11,5:16:99:139,0,101	0/0:39,0:37:99:0,107,1580	0/0:20,0:20:36.09:0,36,502	0/0:24,0:24:45.11:0,45,701	0/1:13,6:20:99:169,0,154	0/1:18,10:29:99:263,0,188	0/0:19,0:19:27.26:0,27,501	0/0:24,0:24:31.73:0,32,548	0/0:19,0:19:48.16:0,48,679	0/0:21,0:21:11.97:0,12,343	0/1:16,4:19:53.08:53,0,253	0/1:18,10:28:99:253,0,195	0/1:15,4:19:99:131,0,103	0/1:7,10:16:35.99:230,0,36	0/1:14,12:26:99:210,0,205	0/1:11,5:16:99:105,0,106	0/1:22,12:34:99:247,0,288	0/0:35,0:35:99:0,105,1676	0/0:33,0:33:84.28:0,84,1206	0/0:13,0:13:39.13:0,39,601
chr10	16299299	.	GAT	G	1515.07	PASS	AB=0.752;AC=11;AF=0.196;AN=56;BaseQRankSum=12.847;DP=691;FS=20.071;HRun=0;HaplotypeScore=140.7621;InbreedingCoeff=-0.2394;MQ=67.39;MQ0=11;MQRankSum=-2.576;QD=6.47;ReadPosRankSum=-0.941;VQSLOD=1.5461;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:56.58:0,57,694	0/0:16,0:16:48.13:0,48,666	0/0:41,0:22:63.20:0,63,902	0/0:23,0:10:30.10:0,30,452	0/0:24,0:23:42.13:0,42,644	0/1:12,3:14:6.22:6,0,173	0/0:18,2:20:21.29:0,21,262	0/0:43,0:43:58.95:0,59,616	0/1:11,5:16:99:113,0,118	0/0:40,0:38:99:0,106,1532	0/0:17,0:17:33.11:0,33,505	0/0:23,0:23:53.06:0,53,782	0/1:16,6:22:99:191,0,145	0/1:17,10:27:99:215,0,190	0/0:19,0:19:41.02:0,41,598	0/0:23,0:23:41.96:0,42,600	0/0:18,0:18:48.16:0,48,694	0/0:21,0:21:31.80:0,32,418	0/1:17,4:20:54.19:54,0,250	0/1:17,10:27:99:236,0,192	0/1:14,4:18:99:104,0,104	0/1:6,10:15:37.79:216,0,38	0/1:13,12:25:99:210,0,201	0/1:10,5:15:99:105,0,104	0/1:20,12:32:99:212,0,287	0/0:37,0:37:99:0,105,1531	0/0:35,0:35:93.26:0,93,1328	0/0:13,0:13:39.13:0,39,598
chr10	16300730	.	TAC	T	1809.21	PASS	AB=0.689;AC=14;AF=0.250;AN=56;BaseQRankSum=-5.733;DP=592;FS=7.705;HRun=0;HaplotypeScore=143.1914;InbreedingCoeff=0.7065;MQ=48.75;MQ0=23;MQRankSum=3.150;QD=14.71;ReadPosRankSum=1.556;VQSLOD=3.2208;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:48.08:0,48,717	1/1:1,7:8:2.81:36,3,0	0/0:25,0:3:6.01:0,6,73	0/0:28,0:8:17.88:0,18,210	1/1:13,2:14:25.51:355,26,0	0/0:18,0:17:23.75:0,24,345	0/0:22,0:21:33.06:0,33,480	0/0:37,0:36:83.45:0,83,1099	0/0:20,0:20:32.03:0,32,473	1/1:19,2:20:43.60:479,44,0	0/1:2,9:10:23.80:64,0,24	0/0:21,0:21:2.28:0,2,469	0/0:27,0:26:53.75:0,54,616	0/0:23,0:24:24.40:0,24,326	0/0:26,0:23:45.15:0,45,693	0/0:24,0:23:53.81:0,54,776	0/1:19,5:22:10.14:250,0,10	0/0:23,0:21:14.37:0,14,509	0/0:20,0:16:33.08:0,33,447	0/0:24,0:22:21.06:0,21,311	0/0:33,0:31:33.72:0,34,601	0/0:14,0:14:18.05:0,18,246	0/0:19,0:18:9.94:0,10,195	0/0:23,0:23:36.06:0,36,534	0/0:15,0:15:26.83:0,27,381	1/1:17,4:19:22.71:445,23,0	1/1:14,2:16:11.51:225,12,0	1/1:7,0:4:12.03:136,12,0
chr10	16300749	.	ATC	A	2468.78	PASS	AB=0.982;AC=20;AF=0.357;AN=56;BaseQRankSum=8.535;DP=650;FS=1.364;HRun=0;HaplotypeScore=167.0898;InbreedingCoeff=0.4883;MQ=57.89;MQ0=16;MQRankSum=4.795;QD=8.31;ReadPosRankSum=-1.589;VQSLOD=3.3727;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:27:60.16:0,60,973	0/0:9,0:9:8.85:0,9,92	0/0:44,0:16:7.43:0,7,428	0/0:47,0:23:23.39:0,23,471	0/0:16,0:16:28.28:0,28,297	1/1:21,1:21:17.62:180,18,0	0/1:18,0:18:32.44:164,0,32	1/1:42,0:41:51.18:626,51,0	0/1:21,2:23:45.52:112,0,46	0/0:23,0:22:60.20:0,60,606	0/0:13,0:12:14.64:0,15,170	0/0:23,0:23:50.40:0,50,812	0/1:24,0:23:3.82:88,0,4	1/1:26,0:26:22.35:213,22,0	0/0:22,0:19:42.13:0,42,665	0/0:23,0:22:60.13:0,60,903	0/0:29,0:29:43.03:0,43,557	0/0:19,0:19:10.92:0,11,462	0/1:15,0:14:39.34:83,0,39	1/1:14,0:13:8.58:68,9,0	0/1:33,1:33:33.50:253,0,34	1/1:14,1:15:4.22:161,4,0	1/1:16,2:19:12.42:219,12,0	0/1:23,0:23:16.87:171,0,17	1/1:21,1:22:14.53:324,15,0	0/0:29,0:27:71.61:0,72,735	0/0:17,0:17:28.53:0,29,270	0/0:8,0:6:14.42:0,14,94
chr10	16300788	.	TCA	T	9242.49	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=12.900;DP=692;FS=1.731;HRun=0;HaplotypeScore=140.9523;InbreedingCoeff=0.9997;MQ=69.63;MQ0=2;MQRankSum=-0.860;QD=29.16;ReadPosRankSum=2.769;VQSLOD=6.6756;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:96.28:0,96,1537	0/0:10,0:10:27.09:0,27,455	0/0:30,0:29:62.40:0,62,1096	0/0:43,0:38:58.42:0,58,917	0/0:24,0:24:66.14:0,66,1019	1/1:2,23:24:63.20:803,63,0	1/1:5,14:19:33.11:424,33,0	1/1:7,40:47:99:1491,120,0	1/1:2,15:17:39.13:501,39,0	0/0:26,0:26:57.19:0,57,956	0/0:17,0:17:45.15:0,45,756	0/0:27,0:27:78.25:0,78,1278	1/1:4,18:22:48.02:614,48,0	1/1:2,25:27:60.19:765,60,0	0/0:25,0:25:66.18:0,66,1029	0/0:28,0:28:75.24:0,75,1231	0/0:29,0:29:74.26:0,74,1193	0/0:15,0:15:42.02:0,42,617	1/1:2,12:14:36.11:449,36,0	1/1:1,15:16:45.15:573,45,0	1/1:7,27:34:69.69:884,70,0	1/1:0,16:16:42.14:540,42,0	1/1:1,25:26:56.56:732,57,0	1/1:3,28:29:59.44:771,59,0	1/1:2,21:23:54.17:694,54,0	0/0:32,0:32:81.28:0,81,1365	0/0:23,0:23:69.22:0,69,1131	0/0:11,0:11:33.11:0,33,556
chr10	16300895	.	TCA	T	5480.89	PASS	AB=0.563;AC=25;AF=0.446;AN=56;BaseQRankSum=7.051;DP=768;FS=23.757;HRun=0;HaplotypeScore=133.6270;InbreedingCoeff=0.9220;MQ=63.52;MQ0=24;MQRankSum=2.183;QD=16.36;ReadPosRankSum=0.956;VQSLOD=3.2263;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,127,2180	0/0:13,0:13:27.06:0,27,408	0/0:52,1:35:32.58:0,33,898	0/0:52,0:36:64.39:0,64,935	0/0:23,0:23:45.14:0,45,728	1/1:12,5:17:20.81:229,21,0	1/1:3,15:18:21.07:273,21,0	1/1:13,33:46:81.29:1210,81,0	1/1:19,9:25:54.15:683,54,0	0/0:36,0:36:93.31:0,93,1546	0/0:11,0:11:33.09:0,33,521	0/0:23,0:23:44.99:0,45,831	1/1:14,13:22:51.16:651,51,0	1/1:4,24:26:18.06:234,18,0	0/0:29,0:29:66.20:0,66,1094	0/0:27,0:27:68.25:0,68,1062	0/0:27,0:26:63.19:0,63,965	0/0:24,0:24:59.66:0,60,976	1/1:3,9:10:24.03:279,24,0	1/1:2,13:15:21.07:265,21,0	0/1:11,38:44:67.70:387,0,68	1/1:1,23:22:18.05:234,18,0	1/1:7,9:15:36.10:453,36,0	1/1:4,35:34:27.05:349,27,0	1/1:3,11:12:18.06:234,18,0	0/0:23,0:23:45.15:0,45,742	0/0:16,0:16:39.12:0,39,630	0/0:20,0:20:51.17:0,51,834
chr10	16300940	.	TCTCACACACACA	T	1311.90	PASS	AB=0.974;AC=14;AF=0.250;AN=56;BaseQRankSum=5.409;DP=672;FS=23.244;HRun=0;HaplotypeScore=201.3732;InbreedingCoeff=-0.3208;MQ=51.82;MQ0=37;MQRankSum=-0.328;QD=3.80;ReadPosRankSum=-0.645;VQSLOD=1.3012;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:27.30:0,27,1498	0/1:10,0:10:61.17:61,0,107	0/0:27,0:3:8.90:0,9,62	0/0:19,0:11:18.81:0,19,158	0/1:24,0:23:99:108,0,104	0/0:19,0:16:14.30:0,14,189	0/0:23,0:20:23.97:0,24,273	0/0:21,0:19:50.72:0,51,424	0/0:25,0:20:19.30:0,19,322	0/1:34,0:33:99:671,0,471	0/0:21,0:21:11.67:0,12,233	0/0:31,0:31:17.47:0,17,1310	0/1:16,0:10:11.18:11,0,107	0/1:27,0:24:0.41:0,0,461	0/0:30,0:29:66.15:0,66,1961	0/0:24,0:24:18.68:0,19,1398	0/1:31,0:30:99:133,0,270	0/1:27,0:27:5.25:5,0,1495	0/0:17,0:14:10.53:0,11,512	0/0:15,0:15:5.28:0,5,526	0/1:42,0:35:7.63:8,0,333	0/1:19,0:17:12.77:13,0,124	0/1:9,0:8:18.57:19,0,26	0/1:47,0:41:26.61:27,0,812	0/0:9,0:7:12.03:0,12,219	0/1:7,9:16:99:252,0,203	0/1:31,0:28:99:138,0,170	0/1:12,0:11:13.92:14,0,168
chr10	16300942	.	TCACACACACA	T	1449.81	PASS	AB=0.805;AC=9;AF=0.173;AN=52;BaseQRankSum=2.217;DP=669;FS=18.406;HRun=0;HaplotypeScore=184.8315;InbreedingCoeff=-0.1700;MQ=49.58;MQ0=37;MQRankSum=-2.621;QD=6.62;ReadPosRankSum=-1.980;VQSLOD=1.1923;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:30.91:0,31,825	0/1:5,5:10:16.98:67,0,17	./.	./.	0/1:10,12:22:21.51:76,0,22	0/0:20,0:17:8.03:0,8,95	0/0:26,0:23:6.82:0,7,71	0/0:21,0:19:5.92:0,6,39	0/0:24,0:19:11.77:0,12,111	0/1:16,16:32:42.34:747,0,42	0/1:18,0:21:32.94:56,0,33	0/0:30,0:30:34.50:0,34,1061	0/0:16,0:11:3.48:0,3,53	0/0:27,0:24:20.19:0,20,364	0/0:30,0:29:39.10:0,39,1438	0/0:23,0:23:38.42:0,38,1219	0/1:20,11:30:38.63:158,0,39	0/0:25,0:26:36.76:0,37,1131	0/0:18,0:15:28.82:0,29,385	0/0:16,0:16:17.93:0,18,312	0/1:41,0:34:4.29:4,0,178	0/0:20,0:18:5.77:0,6,84	0/0:8,0:7:2.92:0,3,17	0/0:49,0:43:34.64:0,35,602	0/0:9,0:7:9.03:0,9,152	0/1:16,0:16:12.64:263,0,13	0/1:16,16:30:10.33:159,0,10	0/1:12,0:11:6.06:51,0,6
chr10	16300981	.	CACACAT	C	4562.11	PASS	AB=1.000;AC=33;AF=0.589;AN=56;BaseQRankSum=2.582;DP=636;FS=1.881;HRun=0;HaplotypeScore=134.6487;InbreedingCoeff=0.4036;MQ=53.80;MQ0=21;MQRankSum=-1.346;QD=9.98;ReadPosRankSum=0.782;VQSLOD=3.5533;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:57.41:0,57,837	0/1:12,0:11:18.99:19,0,81	0/0:13,0:5:14.92:0,15,123	0/0:23,0:12:35.85:0,36,315	0/1:24,0:23:22.98:23,0,74	1/1:16,0:14:20.67:242,21,0	1/1:22,0:21:2.58:34,3,0	1/1:24,0:24:68.31:550,68,0	1/1:21,1:20:35.84:336,36,0	0/1:36,0:35:99:150,0,276	0/1:15,0:14:14.46:14,0,48	0/0:31,0:31:55.28:0,55,901	1/1:19,0:17:2.39:34,2,0	1/1:28,3:30:59.24:561,59,0	0/0:29,0:29:65.44:0,65,1302	0/0:26,0:26:54.31:0,54,941	0/1:25,0:25:30.03:30,0,131	0/0:18,0:18:26.79:0,27,721	1/1:5,10:14:9.42:186,9,0	1/1:15,0:15:4.08:169,4,0	1/1:45,0:41:83.53:845,84,0	1/1:15,0:13:8.97:70,9,0	1/1:14,0:14:14.99:160,15,0	1/1:47,0:46:73.03:693,73,0	1/1:15,0:15:36.86:314,37,0	0/1:23,0:22:54.07:54,0,205	0/1:22,0:20:9.08:77,0,9	0/0:9,0:8:11.93:0,12,91
chr10	16300983	.	CACAT	C	4856.72	PASS	AB=1.000;AC=31;AF=0.554;AN=56;BaseQRankSum=2.456;DP=630;FS=2.339;HRun=0;HaplotypeScore=117.1672;InbreedingCoeff=0.5873;MQ=55.14;MQ0=18;MQRankSum=-1.371;QD=11.73;ReadPosRankSum=0.112;VQSLOD=4.5727;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:39.21:0,39,626	0/1:12,0:11:1.55:2,0,81	0/0:13,0:5:14.92:0,15,123	0/0:24,0:13:38.82:0,39,336	0/1:24,0:23:5.33:5,0,74	1/1:16,0:14:21.01:251,21,0	1/1:5,18:22:3.01:52,3,0	1/1:25,0:25:73.03:587,73,0	1/1:23,0:21:41.62:384,42,0	0/1:34,0:33:26.90:27,0,281	0/0:14,0:13:3.83:0,4,53	0/0:33,0:33:66.25:0,66,702	1/1:2,16:17:2.34:55,2,0	1/1:30,0:30:62.83:617,63,0	0/0:28,0:28:48.43:0,48,953	0/0:27,0:27:40.57:0,41,720	0/0:23,0:23:0.77:0,1,133	0/0:18,0:18:12.65:0,13,486	1/1:15,0:14:17.55:256,18,0	1/1:15,0:15:24.46:258,24,0	1/1:44,0:41:89.70:859,90,0	1/1:14,1:13:8.97:70,9,0	1/1:13,1:14:14.99:152,15,0	1/1:46,0:46:86.30:860,86,0	1/1:15,0:15:38.98:387,39,0	0/1:22,0:21:2.19:2,0,205	0/1:23,0:21:33.19:33,0,52	0/0:8,0:7:11.93:0,12,91
chr10	16302746	.	T	TC	264.74	PASS	AC=14;AF=0.318;AN=44;BaseQRankSum=3.488;DP=224;FS=10.868;HRun=0;HaplotypeScore=36.6319;InbreedingCoeff=0.7475;MQ=93.39;MQ0=0;MQRankSum=-1.600;QD=20.36;ReadPosRankSum=-4.539;VQSLOD=3.1937;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:42.12:0,42,563	0/0:4,0:4:12.04:0,12,168	0/0:18,0:17:51.13:0,51,681	0/0:18,0:17:45.09:0,45,620	0/0:11,0:11:33.11:0,33,461	./.	1/1:1,1:2:3.01:48,3,0	1/1:2,2:4:6.02:90,6,0	./.	0/0:18,0:18:54.18:0,54,755	0/0:11,0:11:33.11:0,33,458	0/0:14,0:14:21.07:0,21,292	./.	1/1:0,1:1:3.01:47,3,0	0/0:14,0:14:36.12:0,36,499	0/0:7,0:7:18.06:0,18,252	0/0:26,0:25:60.20:0,60,838	0/0:19,0:19:42.12:0,42,568	1/1:0,1:1:3.01:42,3,0	./.	1/1:0,2:2:6.02:91,6,0	./.	./.	1/1:0,2:2:3.01:44,3,0	1/1:0,1:1:3.01:45,3,0	0/0:15,0:15:39.13:0,39,546	0/0:14,0:14:24.08:0,24,336	0/0:4,0:4:12.04:0,12,168
chr10	16305182	.	T	TCAGACAGACAGA	20676.25	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-6.186;DP=792;FS=0.000;HRun=0;HaplotypeScore=252.1827;InbreedingCoeff=0.9669;MQ=65.04;MQ0=0;MQRankSum=-14.155;QD=56.19;ReadPosRankSum=-5.615;VQSLOD=3.0275;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:26.60:0,27,2090	0/0:10,0:10:24.08:0,24,780	0/0:33,0:29:33.56:0,34,713	0/0:22,0:21:32.97:0,33,782	0/0:35,0:35:78.26:0,78,2488	1/1:18,4:24:15.05:859,15,0	1/1:22,0:22:21.05:874,21,0	1/1:42,0:40:42.14:1438,42,0	1/1:23,12:36:45.15:2593,45,0	0/0:41,0:40:78.26:0,78,2350	0/0:28,0:29:45.15:0,45,1559	0/0:31,0:31:48.16:0,48,1488	1/1:18,11:32:45.15:2620,45,0	1/1:13,7:24:24.08:1379,24,0	0/0:24,0:24:48.16:0,48,1512	0/0:26,0:26:36.07:0,36,1086	0/0:33,0:33:66.20:0,66,2051	0/0:12,0:12:21.03:0,21,608	1/1:24,3:29:38.07:1180,38,0	1/1:21,12:36:42.14:2441,42,0	1/1:15,2:21:9.03:516,9,0	1/1:19,13:34:49.03:2951,49,0	1/1:12,4:19:17.72:1027,18,0	1/1:18,2:22:4.25:347,4,0	1/1:11,14:27:42.14:2450,42,0	0/0:41,0:41:69.22:0,69,2140	0/0:41,0:41:84.29:0,84,2689	0/0:13,0:13:27.09:0,27,935
chr10	16306707	.	T	TAG	428.33	PASS	AB=0.985;AC=18;AF=0.391;AN=46;BaseQRankSum=1.204;DP=456;FS=2.090;HRun=0;HaplotypeScore=73.0328;InbreedingCoeff=0.4595;MQ=59.96;MQ0=31;MQRankSum=-1.556;QD=2.93;ReadPosRankSum=2.849;VQSLOD=1.7688;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:15.30:0,15,129	1/1:7,0:7:6.02:83,6,0	0/0:64,0:17:13.15:0,13,89	0/0:86,0:22:17.92:0,18,174	0/0:15,0:16:11.02:0,11,121	1/1:7,0:6:2.94:18,3,0	0/1:10,0:10:0:0,0,0	1/1:17,0:15:0.89:2,1,0	1/1:9,0:9:2.94:19,3,0	0/1:9,1:10:37.06:37,0,57	0/0:12,0:12:12.03:0,12,129	0/0:11,0:13:8.78:0,9,82	0/1:11,0:11:0:0,0,0	./.	0/0:15,0:14:20.64:0,21,207	0/0:10,0:10:15.04:0,15,170	1/1:14,6:20:30.10:362,30,0	0/1:23,0:23:21.20:21,0,189	./.	./.	0/1:21,0:20:0:0,0,0	0/1:5,0:5:0:0,0,0	./.	1/1:6,0:6:2.96:19,3,0	./.	0/0:17,0:17:1.60:0,2,109	0/0:13,0:13:26.75:0,27,279	0/0:7,0:6:9.03:0,9,102
chr10	16307134	.	T	TG	9749.68	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-16.991;DP=712;FS=5.971;HRun=6;HaplotypeScore=66.1333;InbreedingCoeff=0.9956;MQ=82.90;MQ0=0;MQRankSum=-0.126;QD=30.37;ReadPosRankSum=0.958;VQSLOD=5.5702;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,135,1377	0/0:4,0:4:12.03:0,12,122	0/0:21,0:21:62.83:0,63,598	0/0:21,0:21:45.02:0,45,499	0/0:28,0:28:69.14:0,69,703	1/1:3,13:16:39.12:491,39,0	1/1:4,24:28:63.20:793,63,0	1/1:3,21:24:63.19:776,63,0	1/1:6,28:34:84.27:1051,84,0	0/0:32,0:32:87.19:0,87,887	0/0:17,0:17:48.11:0,48,489	0/0:32,0:32:87.19:0,87,888	1/1:4,18:22:51.16:642,51,0	1/1:4,26:30:75.24:941,75,0	0/0:27,0:27:69.15:0,69,704	0/0:24,0:24:63.13:0,63,642	0/0:41,0:41:99:0,114,1138	0/0:30,0:30:84.18:0,84,856	1/1:4,24:28:72.23:906,72,0	1/1:4,18:22:48.11:585,48,0	1/1:7,38:45:99:1341,108,0	1/1:3,15:18:42.13:528,42,0	1/1:1,21:22:48.15:603,48,0	1/1:1,18:19:54.17:679,54,0	1/1:1,12:13:33.11:415,33,0	0/0:26,0:26:66.14:0,66,668	0/0:26,0:26:78.16:0,78,788	0/0:10,0:10:30.07:0,30,306
chr10	16307929	.	CG	C	9817.74	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=11.675;DP=677;FS=9.224;HRun=6;HaplotypeScore=69.1239;InbreedingCoeff=0.9999;MQ=84.95;MQ0=0;MQRankSum=-3.529;QD=27.58;ReadPosRankSum=-0.831;VQSLOD=4.7122;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:78.25:0,78,1020	0/0:13,0:13:39.12:0,39,499	0/0:25,0:25:50.05:0,50,645	0/0:21,0:21:54.13:0,54,679	0/0:17,0:17:45.15:0,45,587	1/1:2,20:22:54.13:580,54,0	1/1:1,22:23:63.16:677,63,0	1/1:5,29:34:78.19:837,78,0	1/1:1,28:29:81.20:870,81,0	0/0:24,0:24:63.20:0,63,817	0/0:20,0:20:57.17:0,57,735	0/0:28,0:28:78.25:0,78,1026	1/1:1,23:24:60.15:644,60,0	1/1:4,21:25:63.16:677,63,0	0/0:22,0:22:63.20:0,63,828	0/0:21,0:21:60.20:0,60,789	0/0:22,0:22:60.14:0,60,756	0/0:21,0:21:57.17:0,57,734	1/1:1,20:21:60.15:644,60,0	1/1:2,30:32:90.03:937,90,0	1/1:1,44:45:99:1257,117,0	1/1:1,22:23:63.16:677,63,0	1/1:3,20:23:48.06:502,48,0	1/1:1,22:23:57.14:612,57,0	1/1:2,30:32:84.21:903,84,0	0/0:29,0:29:84.26:0,84,1089	0/0:16,0:16:39.13:0,39,513	0/0:12,0:12:30.10:0,30,395
chr10	16310123	.	CAT	C	983.22	PASS	AB=0.898;AC=19;AF=0.559;AN=34;BaseQRankSum=4.601;DP=183;FS=0.000;HRun=0;HaplotypeScore=21.7907;InbreedingCoeff=0.4307;MQ=89.44;MQ0=1;MQRankSum=-0.141;QD=9.93;ReadPosRankSum=-0.208;VQSLOD=2.8590;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:16,1:17:3.58:4,0,374	1/1:3,0:3:6.01:62,6,0	./.	0/0:21,0:14:8.60:0,9,62	1/1:4,0:4:3.01:37,3,0	./.	0/0:5,0:5:3:0,3,25	0/0:5,0:5:5.99:0,6,51	./.	1/1:2,7:9:21.02:203,21,0	1/1:2,3:5:9.03:110,9,0	0/1:4,1:5:21.61:22,0,177	./.	./.	./.	0/0:9,0:9:12.04:0,12,189	1/1:5,20:26:32.93:380,33,0	0/1:10,1:11:3.56:4,0,422	./.	./.	./.	./.	./.	0/0:2,0:2:2.99:0,3,24	0/0:6,0:6:2.99:0,3,23	1/1:2,4:6:12:111,12,0	1/1:1,3:4:6.02:73,6,0	1/1:0,9:9:9.03:110,9,0
chr10	16310140	.	ATTTTTT	A	186.06	PASS	AC=4;AF=0.118;AN=34;BaseQRankSum=-0.028;DP=133;FS=7.927;HRun=10;HaplotypeScore=38.5140;InbreedingCoeff=0.5266;MQ=90.21;MQ0=1;MQRankSum=-2.960;QD=23.26;ReadPosRankSum=-1.205;VQSLOD=-0.6609;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:39.13:0,39,1156	0/0:3,0:3:9:0,9,151	0/0:5,0:2:5.69:0,6,98	0/0:16,0:10:10.39:0,10,227	0/0:1,0:1:3.01:0,3,66	./.	./.	1/1:2,4:6:12.04:231,12,0	./.	0/0:7,0:7:12.03:0,12,242	0/0:3,0:3:9.03:0,9,201	0/0:6,0:6:18.06:0,18,577	1/1:2,0:2:3.01:51,3,0	./.	0/0:1,0:1:3.01:0,3,82	0/0:6,0:6:15.05:0,15,507	0/0:25,0:25:45.15:0,45,1043	0/0:13,0:13:39.12:0,39,1185	./.	./.	./.	./.	./.	./.	./.	0/0:4,0:4:3.01:0,3,70	0/0:5,0:5:12.04:0,12,298	0/0:10,0:10:12.04:0,12,283
chr10	16310201	.	GTATA	G	100.01	PASS	AC=8;AF=0.267;AN=30;BaseQRankSum=0.966;DP=122;FS=11.279;HRun=0;HaplotypeScore=44.5690;InbreedingCoeff=0.5702;MQ=97.48;MQ0=1;MQRankSum=-1.892;QD=5.00;ReadPosRankSum=-0.367;VQSLOD=-0.1004;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:6:12.04:0,12,270	./.	./.	0/0:12,0:10:6.87:0,7,82	0/0:4,0:4:9.01:0,9,128	1/1:1,5:6:2.79:28,3,0	./.	1/1:8,1:10:6.01:78,6,0	./.	0/0:4,0:4:3:0,3,27	./.	0/0:6,0:7:17.80:0,18,358	./.	./.	./.	./.	0/0:18,0:18:36.07:0,36,781	0/0:16,0:16:35.84:0,36,757	1/1:1,1:2:2.33:49,2,0	./.	./.	0/0:0,2:2:0:0,0,0	./.	./.	1/1:0,2:2:3.01:50,3,0	0/0:2,0:2:3.01:0,3,74	0/0:6,0:7:20.79:0,21,401	0/0:8,0:7:12.04:0,12,297
chr10	16310252	.	TATATATATAC	T	577.23	PASS	AC=10;AF=0.294;AN=34;BaseQRankSum=-0.107;DP=137;FS=30.805;HRun=0;HaplotypeScore=55.8606;InbreedingCoeff=0.6657;MQ=53.77;MQ0=8;MQRankSum=-1.054;QD=15.60;ReadPosRankSum=-2.398;VQSLOD=0.0200;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:7:21.02:0,21,502	./.	./.	./.	0/0:5,0:5:15:0,15,253	1/1:7,1:8:9.58:149,10,0	./.	1/1:19,0:14:25.11:327,25,0	./.	0/0:2,0:2:6.01:0,6,128	0/0:2,0:2:6:0,6,95	0/0:6,0:6:18.06:0,18,687	./.	1/1:2,0:2:3.01:39,3,0	0/0:3,0:3:9.01:0,9,164	0/0:2,0:2:3.01:0,3,47	0/0:19,0:19:51.10:0,51,1402	0/0:23,0:21:66.16:0,66,2264	1/1:4,1:4:4.65:115,5,0	1/1:3,0:3:3.01:73,3,0	./.	0/0:1,1:2:0:0,0,0	./.	./.	./.	./.	0/0:3,0:3:5.99:0,6,48	0/0:10,0:8:15.05:0,15,594
chr10	16310260	.	TAC	T	315.30	PASS	AB=1.000;AC=12;AF=0.316;AN=38;BaseQRankSum=-0.021;DP=163;FS=12.911;HRun=0;HaplotypeScore=36.8602;InbreedingCoeff=0.5526;MQ=55.03;MQ0=7;MQRankSum=-1.480;QD=6.31;ReadPosRankSum=0.012;VQSLOD=1.0638;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:9.61:0,10,167	./.	0/0:9,0:3:8.97:0,9,78	0/0:7,0:3:3.01:0,3,31	0/0:5,0:5:13.53:0,14,100	1/1:7,1:8:8.98:72,9,0	./.	1/1:22,0:18:27:239,27,0	./.	0/1:2,0:2:2.10:2,0,22	0/0:5,0:5:14.97:0,15,120	0/0:5,0:5:8.80:0,9,86	./.	1/1:0,2:2:3:25,3,0	0/1:5,0:5:2.10:2,0,58	0/0:1,0:1:3:0,3,25	0/0:21,0:21:22.59:0,23,377	0/0:27,0:25:50.76:0,51,772	1/1:6,0:5:8.99:83,9,0	1/1:2,3:5:2.99:23,3,0	./.	./.	./.	./.	./.	0/0:4,0:4:12:0,12,104	0/0:2,0:2:2.99:0,3,24	0/0:8,0:7:12.04:0,12,169
chr10	16310893	.	A	ATT	5708.30	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=12.507;DP=612;FS=7.867;HRun=12;HaplotypeScore=108.5083;InbreedingCoeff=0.9826;MQ=77.80;MQ0=0;MQRankSum=-4.622;QD=20.39;ReadPosRankSum=-3.630;VQSLOD=2.9169;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:41:92.23:0,92,822	0/0:9,0:10:14.86:0,15,185	0/0:24,0:25:9.11:0,9,167	0/0:14,0:15:17.26:0,17,134	0/0:28,0:28:62.90:0,63,574	1/1:3,12:16:32.55:408,33,0	1/1:5,10:18:31.95:351,32,0	1/1:11,9:25:46.42:544,46,0	1/1:8,7:19:25.54:267,26,0	0/0:22,0:22:34.63:0,35,331	0/0:26,0:26:41.69:0,42,559	0/0:23,0:24:53.60:0,54,473	1/1:7,12:22:38.50:447,39,0	1/1:0,9:11:17.65:220,18,0	0/0:16,0:16:35.97:0,36,328	0/0:22,0:22:53.96:0,54,500	0/0:22,0:22:60.05:0,60,555	0/0:18,0:18:35.89:0,36,333	1/1:6,10:19:38.79:420,39,0	1/1:8,13:24:46.67:530,47,0	1/1:7,21:34:67.21:799,67,0	1/1:7,11:19:32.49:327,32,0	1/1:4,6:19:39.46:372,39,0	1/1:8,21:32:47.55:591,48,0	1/1:5,14:22:35.09:433,35,0	0/0:19,0:21:47.49:0,47,412	0/0:28,0:30:71.08:0,71,665	0/0:8,0:8:11.96:0,12,111
chr10	16317427	.	TCA	T	3768.49	PASS	AB=0.872;AC=38;AF=0.679;AN=56;BaseQRankSum=8.232;DP=590;FS=0.547;HRun=0;HaplotypeScore=84.9308;InbreedingCoeff=0.3542;MQ=70.65;MQ0=11;MQRankSum=0.355;QD=8.51;ReadPosRankSum=-0.085;VQSLOD=3.1643;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:41,1:43:6.52:7,0,457	0/1:7,0:7:0:0,0,0	0/0:40,0:18:3.01:0,3,45	0/0:44,0:22:3.93:0,4,76	1/1:6,4:11:14.88:148,15,0	0/1:14,7:21:23.18:159,0,23	1/1:15,11:28:3.88:409,4,0	0/1:26,1:27:2.23:38,0,2	1/1:9,10:18:21.06:235,21,0	1/1:16,5:21:12.03:134,12,0	1/1:5,5:13:20.72:196,21,0	0/0:18,0:18:21.07:0,21,316	1/1:6,3:9:9.03:101,9,0	1/1:9,5:17:23.40:206,23,0	0/1:19,1:20:3.43:3,0,380	0/0:18,1:19:8.62:0,9,544	1/1:14,12:26:36.10:402,36,0	0/0:26,0:26:54.15:0,54,795	0/1:13,3:15:16.86:79,0,17	1/1:11,5:16:15.03:162,15,0	0/1:22,6:29:3.36:146,0,3	1/1:7,4:11:6.02:67,6,0	1/1:9,2:11:6.01:67,6,0	0/1:21,14:36:37.12:450,0,37	1/1:8,6:15:20.37:191,20,0	1/1:14,7:21:14.99:168,15,0	1/1:10,8:17:21.06:235,21,0	1/1:5,3:8:15.04:167,15,0
chr10	16317484	.	TG	T	4384.67	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=7.446;DP=503;FS=0.808;HRun=10;HaplotypeScore=71.3740;InbreedingCoeff=0.9638;MQ=71.76;MQ0=0;MQRankSum=-1.778;QD=19.49;ReadPosRankSum=2.288;VQSLOD=5.8309;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,1:32:49.66:0,50,750	0/0:7,0:8:17.88:0,18,180	0/0:25,0:25:37.52:0,38,586	0/0:19,0:17:27.40:0,27,291	0/0:10,1:12:3.86:0,4,253	1/1:3,21:24:38.49:491,38,0	1/1:6,16:22:47.97:413,48,0	1/1:9,17:26:37.62:318,38,0	1/1:1,11:12:32.99:286,33,0	0/0:13,0:13:27.07:0,27,293	0/0:12,0:12:24.06:0,24,258	0/0:20,1:21:34.07:0,34,580	1/1:4,8:12:23.98:208,24,0	1/1:0,15:15:38.99:338,39,0	0/0:21,0:21:51.02:0,51,556	0/0:15,1:16:19.07:0,19,439	0/0:25,1:26:46.16:0,46,737	0/0:25,1:27:42.94:0,43,675	1/1:3,8:11:29.82:240,30,0	1/1:2,13:15:35.98:312,36,0	1/1:4,19:23:57.43:491,57,0	1/1:0,15:16:44.03:370,44,0	1/1:2,10:12:23.99:208,24,0	1/1:6,13:19:41.98:364,42,0	1/1:2,15:18:41.02:344,41,0	0/0:14,0:14:42.11:0,42,465	0/0:21,0:20:42.09:0,42,447	0/0:10,1:11:7.01:0,7,292
chr10	16320395	.	TGTGG	T	3598.25	PASS	AB=1.000;AC=26;AF=0.464;AN=56;BaseQRankSum=8.216;DP=437;FS=54.312;HRun=0;HaplotypeScore=78.4864;InbreedingCoeff=0.7369;MQ=71.02;MQ0=1;MQRankSum=-4.442;QD=14.39;ReadPosRankSum=1.265;VQSLOD=1.2493;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:22:54.14:0,54,1220	0/0:9,0:9:23.54:0,24,445	0/0:15,0:13:16.58:0,17,634	0/0:14,0:13:11.49:0,11,693	0/0:2,0:2:3.01:0,3,83	1/1:14,3:17:17.54:287,18,0	1/1:26,2:28:35.01:537,35,0	1/1:22,0:22:47.64:417,48,0	0/1:11,0:11:43.76:44,0,83	0/0:3,0:3:5.97:0,6,156	0/0:4,0:4:9.03:0,9,200	0/0:14,0:13:36.12:0,36,867	1/1:6,14:20:21.07:351,21,0	1/1:15,2:17:3.78:201,4,0	0/0:12,0:12:30.99:0,31,720	0/1:8,0:8:40.23:40,0,388	0/0:22,0:22:57:0,57,1278	0/0:24,0:24:66.22:0,66,1595	1/1:20,0:20:52:537,52,0	1/1:21,0:21:31.46:201,31,0	1/1:28,0:28:20.14:232,20,0	1/1:8,1:9:4.97:107,5,0	1/1:7,0:7:5.60:28,6,0	1/1:26,1:27:31.31:522,31,0	1/1:14,1:15:8.69:94,9,0	0/0:7,0:7:18.06:0,18,439	0/0:20,0:20:57.67:0,58,1466	0/0:17,0:17:42.04:0,42,865
chr10	16320846	.	C	CAAA	5878.87	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=-3.818;DP=624;FS=20.353;HRun=10;HaplotypeScore=97.3664;InbreedingCoeff=0.8928;MQ=74.05;MQ0=0;MQRankSum=-0.543;QD=30.78;ReadPosRankSum=-2.392;VQSLOD=1.7547;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:43:99:0,111,1304	1/1:1,2:3:6.02:96,6,0	0/0:19,0:19:21.37:0,21,253	0/1:13,0:12:47.06:47,0,94	1/1:6,21:28:65.88:914,66,0	0/0:17,0:18:46.50:0,46,581	0/0:19,0:19:45.11:0,45,546	0/0:23,0:25:35.83:0,36,679	0/0:19,0:20:57.10:0,57,674	1/1:5,15:23:48.09:789,48,0	1/1:1,12:16:45.07:738,45,0	0/0:19,0:19:54.16:0,54,657	0/0:18,0:18:42.09:0,42,506	0/0:20,0:20:16.19:0,16,430	0/0:28,0:28:72.16:0,72,875	0/0:23,0:23:69.21:0,69,838	1/1:5,34:40:81.28:1526,81,0	0/0:28,0:28:63.07:0,63,752	0/0:23,0:24:39.97:0,40,679	0/0:19,0:19:48.12:0,48,581	0/0:28,0:28:72.13:0,72,834	0/0:20,0:21:31.36:0,31,553	0/0:16,0:16:39.11:0,39,473	0/0:28,0:28:69.09:0,69,823	0/0:16,0:17:45.05:0,45,528	1/1:5,18:25:63.10:1020,63,0	1/1:6,14:22:15.52:289,16,0	1/1:3,14:20:30:460,30,0
chr10	16321058	.	CGTGGTCATGTT	C	16764.95	PASS	AB=0.929;AC=27;AF=0.482;AN=56;BaseQRankSum=15.487;DP=562;FS=1.547;HRun=0;HaplotypeScore=190.8390;InbreedingCoeff=0.9156;MQ=86.25;MQ0=0;MQRankSum=-16.581;QD=79.45;ReadPosRankSum=1.906;VQSLOD=4.7778;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,160,8482	0/0:8,0:8:24.08:0,24,1336	0/0:17,0:17:51.05:0,51,2267	0/0:26,0:26:77.63:0,78,3172	0/0:18,0:18:54.19:0,54,3123	1/1:0,13:13:33.11:1229,33,0	1/1:0,21:21:54.19:2010,54,0	1/1:0,23:23:66.19:2122,66,0	1/1:0,3:3:9.03:335,9,0	0/0:30,0:30:87.29:0,87,4667	0/0:14,0:14:42.14:0,42,2386	0/0:32,0:32:96.33:0,96,5658	1/1:0,16:16:36.12:1339,36,0	1/1:0,14:14:36.12:1336,36,0	0/0:25,0:25:75.26:0,75,4368	0/1:12,1:13:72.57:73,0,2084	0/0:47,0:47:99:0,138,7421	0/0:21,0:21:63.22:0,63,3563	1/1:0,11:11:30.08:1029,30,0	1/1:0,18:18:33.11:1228,33,0	1/1:0,23:23:36.12:1320,36,0	1/1:0,18:18:42.14:1563,42,0	1/1:0,11:11:30.10:1116,30,0	1/1:0,12:12:15.05:502,15,0	1/1:0,15:15:42.14:1563,42,0	0/0:30,0:30:84.25:0,84,4672	0/0:25,0:25:75.26:0,75,4193	0/0:5,0:5:15.05:0,15,759
chr10	16324272	.	AACACACACACAC	A	2541.87	PASS	AB=0.806;AC=15;AF=0.268;AN=56;BaseQRankSum=2.715;DP=531;FS=0.685;HRun=0;HaplotypeScore=182.2783;InbreedingCoeff=0.0322;MQ=68.90;MQ0=7;MQRankSum=-5.094;QD=9.28;ReadPosRankSum=0.191;VQSLOD=2.1915;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:48.05:0,48,1704	0/0:8,0:9:9.03:0,9,151	0/0:23,0:16:2.37:0,2,8	0/0:29,0:25:5.97:0,6,60	0/0:12,0:13:11.92:0,12,251	0/1:13,2:17:1.05:401,0,1	0/1:19,4:24:11.93:77,0,12	1/1:21,0:21:17:120,17,0	0/1:15,2:18:26.21:363,0,26	0/0:11,0:14:20.97:0,21,367	0/0:12,0:13:14.98:0,15,235	0/0:16,0:17:35.79:0,36,1474	0/1:18,0:18:3.79:166,0,4	0/1:10,8:18:32.89:253,0,33	0/0:14,0:16:36.10:0,36,1550	0/0:10,0:15:24.07:0,24,931	0/0:16,0:27:24.95:0,25,344	0/0:16,0:20:24.91:0,25,841	0/1:12,0:13:1.08:79,0,1	0/1:13,0:13:17.95:101,0,18	0/1:20,8:28:85.31:85,0,105	0/1:14,2:19:15.22:457,0,15	0/1:6,5:12:0.25:282,0,0	0/1:20,11:31:0.56:1,0,67	0/1:9,12:21:81.73:291,0,82	0/0:10,0:16:24.02:0,24,403	0/1:14,0:18:20.82:21,0,529	0/0:8,0:10:24.50:0,24,480
chr10	16324981	.	CGTGTGTGTGTGTGT	C	1619.85	PASS	AB=0.846;AC=13;AF=0.241;AN=54;BaseQRankSum=5.601;DP=626;FS=8.783;HRun=0;HaplotypeScore=223.3536;InbreedingCoeff=0.7125;MQ=63.56;MQ0=13;MQRankSum=-4.898;QD=11.57;ReadPosRankSum=-0.095;VQSLOD=1.1648;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:50:72.23:0,72,3574	1/1:7,2:10:9.03:332,9,0	0/0:38,0:26:0.25:0,0,6	0/0:25,0:17:1.82:0,2,5	1/1:15,1:19:9.03:306,9,0	0/0:22,0:22:21.07:0,21,1121	0/0:18,0:19:14.52:0,15,647	0/0:27,0:26:21.06:0,21,896	0/0:19,0:19:33.10:0,33,1484	1/1:18,1:21:7.58:276,8,0	1/1:9,3:13:8.70:170,9,0	0/0:20,0:22:42.14:0,42,2035	0/0:15,0:14:15.52:0,16,816	0/0:18,0:16:24.08:0,24,1259	0/0:18,0:18:18.04:0,18,715	0/0:17,0:19:33.11:0,33,1562	1/1:32,5:36:6.01:235,6,0	0/0:22,0:23:46:0,46,2338	0/0:24,0:22:30.83:0,31,1399	0/0:16,0:16:9.03:0,9,474	0/0:45,0:45:51.16:0,51,2320	0/0:22,0:22:12.02:0,12,552	0/0:11,0:11:9.03:0,9,534	0/0:26,0:26:42.14:0,42,2204	0/0:22,0:22:36.12:0,36,2095	1/1:15,1:18:8.11:240,8,0	0/1:18,4:22:98.27:225,0,98	./.
chr10	16326681	.	C	CT	1873.64	PASS	AB=0.883;AC=44;AF=0.786;AN=56;BaseQRankSum=1.779;DP=545;FS=3.119;HRun=17;HaplotypeScore=111.4057;InbreedingCoeff=0.3156;MQ=68.76;MQ0=1;MQRankSum=-2.868;QD=3.93;ReadPosRankSum=-2.814;VQSLOD=0.3311;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:30:6.82:7,0,51	1/1:9,0:9:9.41:45,9,0	0/1:20,1:15:2.79:3,0,36	0/0:14,0:14:5.39:0,5,25	1/1:28,0:26:24.34:101,24,0	0/1:8,2:20:10.63:18,0,11	1/1:11,3:23:9.24:56,9,0	1/1:17,6:22:0.56:66,1,0	1/1:12,8:19:6.66:33,7,0	1/1:16,0:15:14.49:64,14,0	1/1:18,0:18:10.45:49,10,0	1/1:25,0:25:6.89:45,7,0	1/1:10,0:10:9.71:59,10,0	1/1:25,0:25:37.57:214,38,0	0/1:17,1:20:13.67:14,0,21	0/0:18,0:18:1.73:0,2,14	1/1:19,0:19:13.55:63,14,0	0/0:19,0:19:0.47:0,0,11	1/1:13,0:20:16.04:117,16,0	1/1:11,2:20:6.35:91,6,0	0/0:10,0:17:1.24:0,1,12	1/1:6,0:11:2.32:62,2,0	1/1:12,0:12:20.63:136,21,0	1/1:26,0:25:44.41:300,44,0	1/1:17,0:17:21.14:115,21,0	1/1:25,0:23:24.59:119,25,0	1/1:25,0:23:20.97:89,21,0	1/1:13,0:13:29.49:149,29,0
chr10	16327180	.	TG	T	4344.60	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=13.042;DP=784;FS=9.969;HRun=5;HaplotypeScore=74.8652;InbreedingCoeff=0.9691;MQ=91.13;MQ0=0;MQRankSum=-0.449;QD=28.77;ReadPosRankSum=1.656;VQSLOD=4.9748;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:93.31:0,93,1267	1/1:1,7:8:18.05:204,18,0	0/0:28,0:28:75.22:0,75,997	0/0:33,0:33:81.19:0,81,1059	1/1:2,19:21:51.04:548,51,0	0/0:27,0:27:81.23:0,81,1059	0/0:45,0:45:99:0,129,1715	0/0:40,0:40:99:0,105,1409	0/0:20,0:20:60.19:0,60,805	1/1:1,30:31:87.22:968,87,0	1/1:0,19:19:54.15:612,54,0	0/0:46,0:46:99:0,138,1873	0/0:39,0:39:99:0,108,1443	0/0:29,0:29:84.23:0,84,1087	0/0:28,0:28:81.26:0,81,1094	0/0:29,0:29:78.25:0,78,1050	1/1:1,30:31:75.21:851,75,0	0/0:22,0:22:63.21:0,63,862	0/0:28,0:28:78.24:0,78,1039	0/0:22,0:22:63.21:0,63,857	0/0:46,0:46:99:0,129,1747	0/0:25,0:25:72.19:0,72,935	0/0:22,0:22:60.18:0,60,799	0/0:47,1:48:98.48:0,98,1699	0/0:24,0:24:66.21:0,66,888	1/1:0,20:20:60.13:651,60,0	1/1:2,18:20:42.12:476,42,0	1/1:0,1:1:3.01:34,3,0
chr10	16327552	.	AG	A	5945.74	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=17.089;DP=697;FS=1.461;HRun=2;HaplotypeScore=81.3901;InbreedingCoeff=0.9901;MQ=84.22;MQ0=0;MQRankSum=-5.646;QD=37.16;ReadPosRankSum=3.982;VQSLOD=5.4612;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,102,1461	1/1:0,9:9:27.09:348,27,0	0/0:25,0:25:62.49:0,62,855	0/0:20,0:20:56.90:0,57,764	1/1:0,30:30:81.19:1050,81,0	0/0:25,0:25:69.22:0,69,1013	0/0:25,0:25:75.21:0,75,1080	0/0:36,0:36:99:0,105,1572	0/0:25,0:25:75.25:0,75,1123	1/1:1,21:22:63.19:803,63,0	1/1:0,15:15:45.15:584,45,0	0/0:25,0:25:72.22:0,72,1038	0/0:31,0:31:93.29:0,93,1370	0/0:16,0:16:48.16:0,48,718	0/0:36,0:36:99:0,108,1598	0/0:29,0:29:87.29:0,87,1303	1/1:0,26:26:75.24:973,75,0	0/0:25,0:25:75.20:0,75,1060	0/0:33,0:33:93.29:0,93,1337	0/0:23,0:23:69.23:0,69,1031	0/0:35,0:35:96.79:0,97,1420	0/0:30,0:30:90.30:0,90,1339	0/0:25,0:25:75.23:0,75,1082	0/0:14,0:14:42.14:0,42,629	0/0:25,0:25:72.24:0,72,1079	1/1:0,28:28:84.26:1077,84,0	1/1:0,27:27:78.21:993,78,0	1/1:0,3:3:9.03:117,9,0
chr10	16329090	.	G	GGT	2314.30	PASS	AB=0.871;AC=15;AF=0.268;AN=56;BaseQRankSum=-0.459;DP=793;FS=3.419;HRun=0;HaplotypeScore=162.4458;InbreedingCoeff=0.6279;MQ=51.56;MQ0=18;MQRankSum=-4.160;QD=10.81;ReadPosRankSum=1.869;VQSLOD=3.5893;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:51.30:0,51,624	1/1:9,6:15:21.07:318,21,0	0/1:28,0:5:3.08:3,0,38	0/0:29,0:8:7.71:0,8,57	1/1:20,7:26:20.97:309,21,0	0/0:15,0:15:15:0,15,158	0/0:30,0:30:45.68:0,46,732	0/0:45,1:39:3.22:0,3,450	0/0:23,0:24:56.56:0,57,598	1/1:33,10:42:18.79:674,19,0	0/1:13,6:19:29.82:283,0,30	0/0:28,0:29:48.11:0,48,536	0/0:30,0:30:57.17:0,57,666	0/0:32,0:34:42.43:0,42,673	0/0:23,0:22:30.05:0,30,334	0/0:29,0:28:57.11:0,57,641	0/1:19,4:18:29.41:159,0,29	0/0:20,0:23:48.30:0,48,508	0/0:28,0:22:18.35:0,18,229	0/0:33,0:35:74.47:0,74,802	0/0:56,0:56:97.71:0,98,1136	0/0:34,0:34:0.87:0,1,458	0/0:20,0:21:26.41:0,26,251	0/0:28,1:28:12.88:0,13,609	0/0:17,0:20:35.77:0,36,381	1/1:26,7:29:4.26:467,4,0	1/1:15,3:15:14.93:170,15,0	1/1:6,1:5:9:110,9,0
chr10	16329176	.	A	ATG	3605.84	PASS	AB=0.871;AC=16;AF=0.286;AN=56;BaseQRankSum=1.684;DP=1098;FS=2.645;HRun=0;HaplotypeScore=197.4143;InbreedingCoeff=0.7938;MQ=45.23;MQ0=74;MQRankSum=-5.183;QD=15.48;ReadPosRankSum=0.069;VQSLOD=3.7436;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:43:79.83:0,80,1132	1/1:4,8:11:21.07:345,21,0	0/1:62,0:4:5.98:6,0,33	0/0:79,0:11:16.68:0,17,133	1/1:12,6:15:5.83:101,6,0	0/0:20,0:19:35.83:0,36,494	0/0:45,0:44:89.98:0,90,1114	0/0:82,0:60:99:0,142,1566	0/0:28,0:27:60.19:0,60,762	0/1:28,15:33:60.82:1055,0,61	1/1:11,8:16:14.88:253,15,0	0/0:47,0:44:95.20:0,95,1219	0/0:33,0:32:60.14:0,60,747	0/0:33,0:28:42.08:0,42,523	0/0:34,0:30:60.17:0,60,759	0/0:39,0:33:72.21:0,72,898	1/1:13,13:21:45.70:673,46,0	0/0:35,0:35:74.01:0,74,1060	0/0:47,0:30:71.96:0,72,886	0/0:28,0:27:42.12:0,42,542	0/0:119,0:111:99:0,237,2990	0/0:27,0:25:38.92:0,39,490	0/0:23,0:21:33.07:0,33,414	0/0:63,0:61:99:0,120,1656	0/0:37,0:35:62.91:0,63,771	1/1:26,12:25:39.34:844,39,0	1/1:8,3:9:15.05:243,15,0	1/1:1,2:3:6.02:86,6,0
chr10	16329238	.	G	GTGTA	4538.13	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=6.089;DP=1082;FS=41.443;HRun=0;HaplotypeScore=219.6878;InbreedingCoeff=0.8860;MQ=47.35;MQ0=47;MQRankSum=-5.898;QD=31.08;ReadPosRankSum=-0.267;VQSLOD=3.1327;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,103,1715	1/1:5,7:11:17.52:410,18,0	0/0:62,0:10:23.99:0,24,344	0/0:60,0:7:8.01:0,8,168	1/1:5,6:11:11.93:229,12,0	0/0:17,0:15:35.97:0,36,603	0/0:44,0:44:99:0,117,1968	0/0:102,0:73:99:0,195,2933	0/0:40,0:38:99:0,105,1778	1/1:14,20:29:13.47:1293,13,0	1/1:4,12:17:17.38:370,17,0	0/0:33,0:33:95.59:0,96,1583	0/0:49,0:49:99:0,135,2377	0/0:40,0:40:99:0,102,1711	0/0:41,0:40:99:0,105,1798	0/0:36,0:35:95.94:0,96,1482	1/1:11,17:28:19.60:628,20,0	0/0:41,0:41:99:0,110,1821	0/0:38,0:22:57.10:0,57,902	0/0:25,0:24:36.08:0,36,588	0/0:116,0:113:99:0,252,4188	0/0:28,0:27:58.41:0,58,1036	0/0:24,0:21:43.35:0,43,690	0/0:67,0:65:99:0,149,2501	0/0:29,0:26:39.03:0,39,633	1/1:12,11:19:45.08:953,45,0	1/1:2,13:12:29.99:638,30,0	0/1:3,0:3:15.97:18,0,16
chr10	16329278	.	TTG	T	747.74	PASS	AB=0.966;AC=9;AF=0.161;AN=56;BaseQRankSum=9.817;DP=1096;FS=11.912;HRun=0;HaplotypeScore=192.9731;InbreedingCoeff=0.2480;MQ=48.70;MQ0=40;MQRankSum=-1.361;QD=5.09;ReadPosRankSum=-4.960;VQSLOD=0.9192;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:51:99:0,123,1999	0/0:8,0:7:8.41:0,8,45	0/0:71,0:4:3.01:0,3,44	0/0:65,0:8:12.03:0,12,157	1/1:15,0:14:6.49:67,6,0	0/0:22,0:21:22.10:0,22,814	0/0:43,0:43:99:0,105,1623	0/0:58,0:51:99:0,99,1763	0/0:42,0:41:99:0,105,1722	0/1:29,2:29:35.22:271,0,35	0/1:18,0:17:6.85:31,0,7	0/0:41,0:41:99:0,105,1728	0/0:52,0:50:99:0,135,2031	0/0:46,0:44:99:0,109,1746	0/0:41,0:40:99:0,101,1654	0/0:37,0:37:99:0,99,1549	0/1:29,0:29:35.23:93,0,35	0/0:38,1:37:37.73:0,38,1195	0/0:25,0:19:46.97:0,47,742	0/0:22,0:22:42.14:0,42,649	0/0:142,0:138:99:0,260,4040	0/0:29,0:27:57.19:0,57,915	0/0:20,0:20:33.09:0,33,511	0/0:65,0:64:99:0,166,2572	0/0:20,0:20:36.78:0,37,530	1/1:23,3:24:3.66:259,4,0	0/1:19,0:17:22.63:153,0,23	0/1:7,1:6:11.32:11,0,23
chr10	16329307	.	G	GGT	5294.95	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=9.019;DP=1192;FS=8.724;HRun=0;HaplotypeScore=197.2233;InbreedingCoeff=0.9199;MQ=47.92;MQ0=77;MQRankSum=-2.253;QD=23.64;ReadPosRankSum=-0.852;VQSLOD=4.4680;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:55:99:0,111,1520	1/1:5,3:6:12.04:198,12,0	0/0:32,0:1:2.88:0,3,15	0/0:33,0:5:3.01:0,3,34	1/1:8,11:19:25.97:450,26,0	0/0:24,0:23:62.23:0,62,763	0/0:33,0:33:68.25:0,68,922	0/0:106,0:76:99:0,140,1711	0/0:33,0:32:66.21:0,66,839	1/1:29,19:39:59.94:915,60,0	1/1:10,9:16:15.05:247,15,0	0/0:55,0:53:99:0,108,1353	0/0:48,0:45:93.24:0,93,1135	0/0:41,0:38:84.25:0,84,1055	0/0:44,0:40:99:0,105,1274	0/0:47,0:46:99:0,114,1374	1/1:10,21:30:57.19:948,57,0	0/0:38,0:37:59.74:0,60,932	0/0:35,0:20:39.19:0,39,492	0/0:32,0:29:54.08:0,54,642	0/0:146,0:138:99:0,226,3085	0/0:38,0:35:74.71:0,75,939	0/0:20,0:18:30.07:0,30,367	0/0:70,0:68:99:0,149,1875	0/0:26,0:26:45.33:0,45,565	1/1:20,34:47:94.32:1495,94,0	1/1:11,15:24:6.97:661,7,0	1/1:6,9:10:24.08:382,24,0
chr10	16330541	.	CAGAG	C	1095.98	PASS	AB=0.935;AC=10;AF=0.179;AN=56;BaseQRankSum=-0.263;DP=546;FS=17.282;HRun=0;HaplotypeScore=114.7702;InbreedingCoeff=-0.0030;MQ=74.97;MQ0=2;MQRankSum=-0.373;QD=6.37;ReadPosRankSum=1.136;VQSLOD=1.5642;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:23:44.84:0,45,845	1/1:1,0:1:3.01:47,3,0	0/0:24,0:16:15.30:0,15,209	0/1:29,0:23:1.39:1,0,224	0/1:21,2:23:9.49:346,0,9	0/0:26,0:26:57.17:0,57,1250	0/0:25,0:26:62.89:0,63,1189	0/0:22,0:22:39.10:0,39,634	0/0:10,0:10:23.43:0,23,478	0/1:18,2:20:99:199,0,240	0/1:20,0:20:99:113,0,111	0/0:14,0:16:32.50:0,33,513	0/0:16,0:16:42.11:0,42,935	0/0:14,0:15:35.81:0,36,636	0/0:11,0:11:27.09:0,27,606	0/0:15,0:15:36.08:0,36,811	0/1:30,1:31:20.61:21,0,239	0/0:35,0:35:75.18:0,75,1612	0/0:18,0:18:39.09:0,39,613	0/0:29,0:29:54.02:0,54,855	0/0:17,0:16:45.09:0,45,812	0/0:15,0:15:35.94:0,36,772	0/0:14,0:14:30.07:0,30,601	0/0:27,0:28:47.84:0,48,902	0/0:12,0:12:30.06:0,30,568	0/1:21,4:25:21.84:413,0,22	0/1:15,1:16:60.66:61,0,192	0/1:6,1:7:34.01:34,0,76
chr10	16330567	.	G	GGGAA	6143.24	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=9.715;DP=528;FS=6.189;HRun=0;HaplotypeScore=98.5425;InbreedingCoeff=0.9924;MQ=65.56;MQ0=7;MQRankSum=-2.593;QD=39.13;ReadPosRankSum=1.751;VQSLOD=5.0287;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:20:48.08:0,48,791	1/1:5,0:5:15.01:189,15,0	0/0:31,0:17:42:0,42,568	0/0:26,0:17:17.95:0,18,243	1/1:6,18:25:32.75:418,33,0	0/0:24,0:24:60.18:0,60,1036	0/0:23,0:23:63.05:0,63,1008	0/0:21,0:21:38.97:0,39,538	0/0:8,0:8:22.30:0,22,369	1/1:2,18:20:56.58:1225,57,0	1/1:2,15:19:38.86:728,39,0	0/0:16,0:15:39.11:0,39,640	0/0:17,0:17:48.14:0,48,825	0/0:12,0:12:36.12:0,36,614	0/0:13,0:13:38.84:0,39,581	0/0:13,0:13:39.11:0,39,673	1/1:4,25:30:28.22:1192,28,0	0/0:26,0:27:62.13:0,62,1197	0/0:15,0:15:39.05:0,39,578	0/0:15,0:14:42.06:0,42,585	0/0:16,0:15:36.10:0,36,582	0/0:15,0:15:42.12:0,42,714	0/0:19,0:19:48.15:0,48,801	0/0:20,0:20:45.14:0,45,779	0/0:17,0:17:51.15:0,51,839	1/1:6,19:25:67.21:1111,67,0	1/1:3,19:23:36.10:909,36,0	1/1:1,8:9:15.05:372,15,0
chr10	16332816	.	T	TATCAA	11659.36	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-12.390;DP=721;FS=0.000;HRun=0;HaplotypeScore=130.4149;InbreedingCoeff=0.9971;MQ=88.39;MQ0=0;MQRankSum=-2.682;QD=70.66;ReadPosRankSum=0.674;VQSLOD=6.2220;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,102,1978	1/1:1,9:11:27.09:793,27,0	0/0:24,0:25:60.09:0,60,1044	0/0:30,0:30:76.05:0,76,1370	1/1:4,23:28:69.02:1678,69,0	0/0:26,0:26:69.21:0,69,1391	0/0:24,0:24:69.22:0,69,1391	0/0:33,0:33:81.21:0,81,1494	0/0:29,0:29:81.28:0,81,1666	1/1:7,25:33:87.26:2553,87,0	1/1:1,12:13:33.11:1014,33,0	0/0:26,0:26:75.26:0,75,1553	0/0:36,0:36:99:0,102,2015	0/0:28,0:28:78.27:0,78,1616	0/0:38,0:38:99:0,102,2099	0/0:19,0:19:57.18:0,57,1144	1/1:0,16:17:42.62:1292,43,0	0/0:14,0:14:39.09:0,39,762	0/0:25,0:25:66.16:0,66,1225	0/0:26,0:26:72.25:0,72,1492	0/0:26,0:26:72.22:0,72,1437	0/0:39,0:39:99:0,108,2142	0/0:31,0:31:90.29:0,90,1795	0/0:30,0:30:78.25:0,78,1557	0/0:15,0:15:36.12:0,36,746	1/1:9,20:32:74.97:2061,75,0	1/1:3,23:26:63.22:1879,63,0	1/1:1,4:5:15.02:389,15,0
chr10	16333482	.	T	TA	4384.86	PASS	AB=0.610;AC=20;AF=0.357;AN=56;BaseQRankSum=-10.740;DP=542;FS=8.255;HRun=11;HaplotypeScore=57.0706;InbreedingCoeff=0.5858;MQ=78.63;MQ0=0;MQRankSum=-1.172;QD=17.13;ReadPosRankSum=0.196;VQSLOD=5.5379;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,1:35:50.19:0,50,570	0/0:4,0:4:8.96:0,9,70	0/0:11,0:11:2.92:0,3,56	0/0:20,0:20:10.46:0,10,121	0/0:16,1:19:15.30:0,15,272	1/1:2,17:19:33.07:335,33,0	1/1:1,14:18:37.91:388,38,0	1/1:14,17:31:27.84:456,28,0	1/1:3,13:16:15.03:314,15,0	0/0:19,0:19:44.81:0,45,347	0/0:18,0:19:55.80:0,56,419	0/0:20,0:20:47.79:0,48,371	0/1:4,13:17:7.39:296,0,7	1/1:7,19:26:54.11:548,54,0	0/0:29,0:29:62.71:0,63,488	0/0:15,0:16:10.45:0,10,251	0/0:22,0:23:49.83:0,50,377	0/0:17,0:18:46.84:0,47,354	0/1:7,11:20:10.13:278,0,10	0/1:7,10:17:13.41:241,0,13	0/1:7,9:15:25.39:131,0,25	0/1:6,15:21:1.38:351,0,1	0/1:9,15:24:0.70:351,0,1	1/1:2,8:10:24.04:240,24,0	1/1:3,18:21:44.09:455,44,0	0/0:18,0:19:46.83:0,47,352	0/0:22,0:22:32.73:0,33,392	0/0:11,0:11:31.92:0,32,238
chr10	16338006	.	GC	G	580.54	PASS	AB=0.792;AC=32;AF=0.941;AN=34;BaseQRankSum=-2.934;DP=49;FS=8.695;HRun=1;HaplotypeScore=22.2590;InbreedingCoeff=-0.0584;MQ=107.54;MQ0=0;MQRankSum=-1.567;QD=12.62;ReadPosRankSum=-2.308;VQSLOD=0.5754;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	1/1:0,1:1:3.01:36,3,0	0/1:2,1:3:30.50:61,0,31	0/1:4,1:5:13.18:13,0,27	./.	1/1:5,0:5:12.01:108,12,0	1/1:4,0:4:3.14:41,3,0	1/1:4,0:4:3.95:30,4,0	1/1:1,0:1:3:26,3,0	1/1:0,2:2:6.02:76,6,0	1/1:3,0:3:2.96:19,3,0	1/1:1,0:1:1.25:3,1,0	1/1:1,0:1:0.47:1,0,0	1/1:4,0:4:6.94:54,7,0	1/1:1,0:1:2.97:20,3,0	./.	1/1:0,3:3:3.01:37,3,0	1/1:3,0:3:5.96:44,6,0	1/1:2,0:2:3.47:28,3,0	./.	./.	./.	./.	1/1:3,0:3:8.99:75,9,0	./.	./.	./.	./.
chr10	16338350	.	C	CTTTT	5934.93	PASS	AB=0.828;AC=42;AF=0.750;AN=56;BaseQRankSum=5.606;DP=503;FS=24.792;HRun=16;HaplotypeScore=138.7363;InbreedingCoeff=0.7054;MQ=60.40;MQ0=8;MQRankSum=-6.860;QD=15.66;ReadPosRankSum=-4.608;VQSLOD=-0.6518;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:36:61.82:0,62,703	1/1:2,0:2:5.85:36,6,0	0/1:15,0:10:12.68:13,0,27	0/0:9,0:9:4.66:0,5,32	1/1:25,0:24:47.80:417,48,0	1/1:12,0:14:20.67:260,21,0	1/1:21,0:26:51.71:696,52,0	1/1:39,1:39:25.48:660,25,0	1/1:5,1:12:6.49:119,6,0	1/1:19,0:18:33.90:380,34,0	1/1:8,0:8:16.92:140,17,0	0/0:14,0:15:20.20:0,20,197	1/1:8,0:8:13.52:146,14,0	1/1:17,0:20:33.73:402,34,0	0/0:14,0:14:17.78:0,18,178	0/0:23,0:22:30.70:0,31,330	1/1:25,0:22:30.43:225,30,0	0/0:25,0:24:6.85:0,7,235	1/1:18,1:20:31.91:439,32,0	1/1:8,0:12:19.31:262,19,0	1/1:9,0:10:7.73:56,8,0	1/1:8,6:14:29.99:374,30,0	0/1:6,4:10:24.09:102,0,24	1/1:14,2:19:15.99:154,16,0	1/1:5,1:13:12.04:168,12,0	1/1:26,0:24:44.95:374,45,0	1/1:27,0:27:40.68:371,41,0	1/1:8,0:8:13.69:141,14,0
chr10	16338916	.	A	AGTG	1127.79	PASS	AC=34;AF=0.895;AN=38;BaseQRankSum=1.583;DP=55;FS=7.803;HRun=0;HaplotypeScore=151.8201;InbreedingCoeff=0.2137;MQ=29.00;MQ0=0;MQRankSum=0.605;QD=22.11;ReadPosRankSum=2.002;VQSLOD=3.1096;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:0,3:3:2.75:0,3,15	1/1:0,1:1:3.01:46,3,0	./.	./.	1/1:0,2:2:2.84:9,3,0	1/1:0,2:2:6.02:82,6,0	./.	./.	1/1:1,5:6:12.86:111,13,0	1/1:0,1:1:3.01:53,3,0	./.	1/1:0,6:6:10.76:104,11,0	1/1:0,9:9:24.54:292,25,0	1/1:0,3:3:8.95:83,9,0	1/1:0,2:2:6.02:80,6,0	1/1:0,3:3:6.49:83,6,0	./.	1/1:1,0:1:2.50:9,2,0	./.	./.	./.	1/1:0,5:5:2.20:45,2,0	0/0:0,1:1:0:0,0,0	1/1:0,2:2:4.24:28,4,0	1/1:0,2:2:2.04:7,2,0	1/1:0,1:1:3.01:52,3,0	1/1:0,4:4:8.90:118,9,0	1/1:0,1:1:2.68:11,3,0
chr10	16338922	.	T	TC	797.22	PASS	AB=0.500;AC=32;AF=0.889;AN=36;BaseQRankSum=2.075;DP=55;FS=0.000;HRun=0;HaplotypeScore=152.2080;InbreedingCoeff=0.1293;MQ=29.00;MQ0=0;MQRankSum=0.194;QD=15.63;ReadPosRankSum=2.403;VQSLOD=4.9704;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:0,3:3:1.61:0,2,13	1/1:0,1:1:3.01:33,3,0	./.	./.	1/1:0,2:2:1.97:6,2,0	1/1:0,2:2:6.01:60,6,0	./.	./.	1/1:1,5:6:5.47:63,5,0	1/1:0,1:1:3.01:33,3,0	./.	0/1:0,6:6:5.73:58,0,6	1/1:0,9:9:24.92:233,25,0	1/1:0,3:3:8.91:72,9,0	1/1:0,2:2:6.01:58,6,0	0/1:0,3:3:0.28:50,0,0	./.	1/1:0,1:1:1.55:4,2,0	./.	./.	./.	1/1:0,5:5:6.19:45,6,0	./.	1/1:0,2:2:3.93:12,4,0	1/1:0,2:2:0.44:1,0,0	1/1:0,1:1:3.01:34,3,0	1/1:0,4:4:11.89:109,12,0	1/1:0,1:1:2.74:12,3,0
chr10	16339005	.	G	GA	2994.11	PASS	AC=48;AF=0.923;AN=52;BaseQRankSum=4.866;DP=402;FS=5.526;HRun=0;HaplotypeScore=247.3446;InbreedingCoeff=0.6064;MQ=44.86;MQ0=0;MQRankSum=-3.334;QD=8.11;ReadPosRankSum=4.008;VQSLOD=2.9235;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:18:2.50:9,2,0	./.	0/0:0,0:6:7.91:0,8,18	0/0:0,0:1:1.82:0,2,5	1/1:0,6:6:7.87:31,8,0	1/1:0,11:11:24.85:108,25,0	1/1:1,23:24:57.08:222,57,0	1/1:0,6:6:14.08:67,14,0	1/1:22,0:22:2.50:9,2,0	1/1:0,16:16:44.73:214,45,0	1/1:2,10:12:20:81,20,0	1/1:5,25:30:41.19:204,41,0	1/1:1,20:21:55.11:216,55,0	1/1:2,19:21:45.50:179,46,0	1/1:1,21:22:51.88:200,52,0	1/1:1,26:27:68.27:269,68,0	1/1:0,10:10:26.34:104,26,0	1/1:1,14:15:41.86:194,42,0	1/1:0,10:10:25.39:128,25,0	1/1:0,14:14:31.79:143,32,0	1/1:0,11:11:15.64:61,16,0	./.	1/1:2,16:18:25.88:105,26,0	1/1:2,10:12:17.07:60,17,0	1/1:0,10:10:26.72:114,27,0	1/1:1,15:16:44.44:204,44,0	1/1:0,15:14:37.93:161,38,0	1/1:1,1:2:2.74:12,3,0
chr10	16339657	.	TAA	T	4971.45	PASS	AB=1.000;AC=27;AF=0.482;AN=56;BaseQRankSum=9.233;DP=499;FS=7.199;HRun=12;HaplotypeScore=64.9442;InbreedingCoeff=0.9298;MQ=67.27;MQ0=1;MQRankSum=-0.440;QD=21.80;ReadPosRankSum=2.650;VQSLOD=4.1996;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:51.13:0,51,696	0/0:8,0:8:18.06:0,18,268	0/0:15,0:13:26.75:0,27,335	0/1:8,0:6:9.56:10,0,163	0/0:28,0:32:80.13:0,80,1028	1/1:0,16:16:30.07:305,30,0	1/1:0,14:14:36.08:366,36,0	1/1:7,21:28:45.48:620,45,0	1/1:3,12:15:32.82:323,33,0	0/0:22,0:23:60.19:0,60,859	0/0:15,0:15:42.12:0,42,585	0/0:11,0:13:29.57:0,30,376	1/1:3,23:26:63.04:641,63,0	1/1:3,11:14:27.05:275,27,0	0/0:17,0:17:45.15:0,45,663	0/0:14,0:16:44.63:0,45,616	0/0:30,0:31:83.76:0,84,1196	0/0:13,0:13:36.07:0,36,492	1/1:1,7:9:23.78:225,24,0	1/1:1,14:15:42.08:427,42,0	1/1:0,10:10:30.07:305,30,0	1/1:1,16:17:42.09:427,42,0	1/1:5,15:21:36.05:366,36,0	1/1:4,11:15:33.04:336,33,0	1/1:5,13:20:12.92:347,13,0	0/0:22,0:24:69.20:0,69,966	0/0:33,0:35:89.77:0,90,1270	0/0:8,0:8:24.04:0,24,300
chr10	16339998	.	GACAC	G	1609.03	PASS	AC=26;AF=0.500;AN=52;BaseQRankSum=4.593;DP=582;FS=0.000;HRun=0;HaplotypeScore=103.3420;InbreedingCoeff=0.7793;MQ=65.29;MQ0=12;MQRankSum=-1.945;QD=6.26;ReadPosRankSum=0.321;VQSLOD=1.9659;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:32:21.06:0,21,437	0/0:3,0:4:3.01:0,3,52	./.	./.	0/0:12,0:16:18.06:0,18,324	1/1:15,1:16:5.96:65,6,0	1/1:19,1:20:8.79:81,9,0	1/1:16,0:15:1.27:19,1,0	1/1:13,6:21:4.16:159,4,0	0/0:17,0:18:20.81:0,21,387	0/0:13,0:17:6.69:0,7,143	0/0:16,0:17:20.75:0,21,224	1/1:15,1:19:8.82:108,9,0	1/1:9,4:15:15.03:191,15,0	0/0:19,0:20:21.28:0,21,408	0/0:17,0:24:29.04:0,29,450	0/0:20,0:33:29.84:0,30,513	0/0:20,0:21:32.83:0,33,626	1/1:13,2:13:3.08:88,3,0	1/1:9,0:11:9.01:82,9,0	1/1:35,1:34:8.76:87,9,0	1/1:15,0:19:12.01:120,12,0	1/1:8,6:16:21.49:288,21,0	1/1:28,11:39:9.63:440,10,0	1/1:10,3:14:6.01:74,6,0	0/0:16,0:16:21.07:0,21,333	0/0:16,0:17:24.08:0,24,475	0/0:3,0:4:6.02:0,6,123
chr10	16341022	.	AAAATAAAT	A	6058.63	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=11.901;DP=319;FS=0.000;HRun=0;HaplotypeScore=85.8830;InbreedingCoeff=0.8816;MQ=53.78;MQ0=4;MQRankSum=-8.171;QD=54.09;ReadPosRankSum=2.384;VQSLOD=4.3974;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:54.19:0,54,2288	1/1:0,6:6:15.05:397,15,0	0/0:9,0:3:5.99:0,6,95	0/0:5,0:3:9.03:0,9,227	1/1:3,20:23:54.18:1326,54,0	0/0:24,0:24:66.23:0,66,2480	0/0:7,0:7:18.06:0,18,764	0/0:35,0:34:78.26:0,78,2816	0/0:4,0:4:12.04:0,12,403	1/1:1,11:11:30.10:752,30,0	1/1:1,15:16:42.14:1062,42,0	0/0:11,0:11:21.07:0,21,764	0/0:10,0:10:24.07:0,24,850	0/0:6,0:6:18.05:0,18,663	0/0:7,0:7:18.05:0,18,643	0/0:5,0:5:9.03:0,9,383	1/1:6,9:15:15.05:397,15,0	0/0:13,0:13:30.10:0,30,1251	0/0:12,0:12:30.09:0,30,1008	0/0:6,0:6:15.05:0,15,616	0/0:1,0:1:3.01:0,3,111	0/0:2,0:2:6.02:0,6,231	0/0:7,0:7:15.04:0,15,534	0/0:5,0:5:6.02:0,6,241	0/0:18,0:18:39.13:0,39,1511	1/1:0,15:15:42.14:1019,42,0	1/1:5,10:15:21.07:556,21,0	1/1:0,10:10:21.07:550,21,0
chr10	16341175	.	CCGATCAT	C	12808.60	PASS	AC=40;AF=0.741;AN=54;BaseQRankSum=13.124;DP=429;FS=4.641;HRun=0;HaplotypeScore=115.9618;InbreedingCoeff=0.9672;MQ=82.07;MQ0=0;MQRankSum=-13.158;QD=44.79;ReadPosRankSum=0.248;VQSLOD=4.6336;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,123,4699	1/1:1,3:4:9.03:188,9,0	0/0:14,0:14:33.11:0,33,1126	0/0:19,0:19:35.20:0,35,996	1/1:1,16:17:39.13:753,39,0	1/1:3,16:19:39.13:941,39,0	1/1:4,16:20:27.09:578,27,0	1/1:13,22:35:66.21:1523,66,0	1/1:1,10:11:27.09:606,27,0	1/1:3,12:15:39.11:826,39,0	1/1:2,6:8:18.06:370,18,0	0/0:11,0:11:33.11:0,33,1274	1/1:3,20:23:57.20:1369,57,0	1/1:0,9:9:27.09:627,27,0	0/0:18,0:18:48.16:0,48,1814	0/0:9,0:9:27.09:0,27,1027	1/1:1,7:8:18.06:423,18,0	0/0:27,0:27:69.24:0,69,2614	1/1:8,6:14:18.06:444,18,0	1/1:0,10:10:30.10:625,30,0	1/1:6,11:17:14.59:333,15,0	1/1:2,6:8:9.03:180,9,0	1/1:3,6:9:18.06:405,18,0	1/1:3,15:18:26.98:647,27,0	1/1:4,10:14:21.07:501,21,0	1/1:1,14:15:39.13:953,39,0	1/1:2,10:12:21.07:517,21,0	./.
chr10	16341656	.	AAAAC	A	5645.98	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=13.807;DP=580;FS=1.264;HRun=0;HaplotypeScore=94.8896;InbreedingCoeff=0.9975;MQ=65.16;MQ0=2;MQRankSum=-1.666;QD=35.07;ReadPosRankSum=2.381;VQSLOD=4.7746;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:96.31:0,96,2148	1/1:1,10:11:27.09:456,27,0	0/0:20,0:14:24.51:0,25,473	0/0:19,0:18:27.05:0,27,491	1/1:6,15:20:41.88:512,42,0	0/0:22,0:22:54.13:0,54,1139	0/0:20,0:20:51.14:0,51,1131	0/0:29,0:29:66.19:0,66,1363	0/0:25,0:25:72.20:0,72,1610	1/1:8,19:26:63.08:971,63,0	1/1:2,9:11:27.09:427,27,0	0/0:21,0:21:60.21:0,60,1457	0/0:19,0:19:45.13:0,45,1056	0/0:18,0:18:48.13:0,48,1053	0/0:23,0:23:45.15:0,45,1088	0/0:11,0:11:30.10:0,30,734	1/1:3,30:33:75.26:1271,75,0	0/0:15,0:15:33.06:0,33,717	0/0:11,0:11:27.09:0,27,616	0/0:19,0:19:51.16:0,51,1139	0/0:29,0:29:60.20:0,60,1426	0/0:23,0:23:45.10:0,45,956	0/0:13,0:13:36.12:0,36,855	0/0:20,0:20:48.16:0,48,1151	0/0:27,0:27:78.23:0,78,1781	1/1:3,14:17:42.08:651,42,0	1/1:3,31:34:63.14:1053,63,0	1/1:1,6:7:18.06:305,18,0
chr10	16343413	.	CGTGTGT	C	1800.46	PASS	AB=0.864;AC=30;AF=0.577;AN=52;BaseQRankSum=2.981;DP=639;FS=0.822;HRun=0;HaplotypeScore=154.9188;InbreedingCoeff=0.4764;MQ=64.14;MQ0=15;MQRankSum=-5.288;QD=5.04;ReadPosRankSum=-1.117;VQSLOD=2.6280;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:32:42.14:0,42,1218	0/0:8,0:10:1.87:0,2,33	./.	./.	0/0:19,0:24:9.01:0,9,58	1/1:10,5:17:12.04:224,12,0	1/1:20,3:23:6.35:53,6,0	0/0:27,0:27:2.44:0,2,6	1/1:21,9:29:15.01:234,15,0	0/1:23,0:24:0.38:0,0,20	1/1:13,2:16:3.46:26,3,0	0/0:30,0:30:20:0,20,537	1/1:16,6:22:33.07:590,33,0	1/1:14,5:20:6.02:102,6,0	0/0:14,0:16:17.58:0,18,444	0/0:34,0:34:45.36:0,45,1132	0/0:14,0:22:0.35:0,0,59	0/0:13,0:15:6.02:0,6,141	1/1:10,4:14:6.02:119,6,0	1/1:14,6:21:9.92:161,10,0	1/1:33,5:36:0.88:2,1,0	0/1:18,1:18:0:0,0,0	1/1:8,1:12:5.05:44,5,0	1/1:27,15:44:8.59:141,9,0	1/1:8,6:13:3.01:39,3,0	0/1:6,0:11:67.76:114,0,68	1/1:10,1:13:4.78:64,5,0	0/1:15,2:18:52.17:52,0,53
chr10	16343997	.	G	GT	8068.44	PASS	AB=0.706;AC=41;AF=0.732;AN=56;BaseQRankSum=-2.932;DP=537;FS=11.618;HRun=11;HaplotypeScore=65.1389;InbreedingCoeff=0.6833;MQ=69.54;MQ0=0;MQRankSum=0.673;QD=18.51;ReadPosRankSum=0.987;VQSLOD=5.3338;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:23.87:0,24,186	1/1:2,11:13:12.72:286,13,0	0/1:20,1:18:24.86:25,0,115	0/0:6,0:6:8.58:0,9,68	1/1:10,31:41:32.11:671,32,0	1/1:3,14:17:39.03:384,39,0	1/1:3,10:13:12.97:285,13,0	1/1:10,18:28:30.86:488,31,0	1/1:2,13:15:15.98:342,16,0	1/1:3,12:15:9.83:281,10,0	1/1:2,20:22:53.88:509,54,0	0/0:17,0:17:20.93:0,21,301	1/1:8,15:23:45.09:457,45,0	1/1:3,17:21:44.92:440,45,0	0/0:21,0:21:55.81:0,56,422	0/0:21,0:22:61.81:0,62,470	1/1:2,25:28:63.09:629,63,0	0/0:19,0:19:47.74:0,48,363	1/1:6,18:24:57.03:553,57,0	0/1:6,13:19:11.30:294,0,11	1/1:3,5:8:12.02:122,12,0	1/1:3,10:14:27.05:274,27,0	1/1:7,13:20:3.57:321,4,0	0/1:3,10:13:4.52:241,0,5	1/1:10,10:20:18.68:350,19,0	1/1:5,18:24:36.99:506,37,0	1/1:6,20:26:44.69:536,45,0	1/1:3,5:9:8.85:75,9,0
chr10	16344124	.	GGAGAGAGAGAGAGA	G	323.39	PASS	AB=0.964;AC=12;AF=0.231;AN=52;BaseQRankSum=-1.832;DP=449;FS=2.444;HRun=0;HaplotypeScore=199.1423;InbreedingCoeff=-0.0784;MQ=61.54;MQ0=12;MQRankSum=0.217;QD=1.80;ReadPosRankSum=-2.488;VQSLOD=2.6750;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:29:7.86:8,0,72	0/0:5,0:5:2.97:0,3,20	./.	0/0:23,0:16:0:0,0,0	1/1:18,0:18:0.47:1,0,0	0/0:22,0:20:8.08:0,8,31	0/1:17,0:17:21.91:22,0,54	0/0:24,0:24:4.44:0,4,16	0/0:23,0:23:18.82:0,19,142	0/0:14,0:14:5.93:0,6,58	0/1:16,0:16:7.60:8,0,38	0/1:14,0:14:21.47:21,0,125	1/1:22,0:19:3.01:94,3,0	0/0:16,0:15:4.13:0,4,27	0/1:20,0:20:15.01:22,0,15	0/1:9,5:15:62.91:138,0,63	0/0:15,0:13:2.89:0,3,16	0/1:17,0:17:13.69:127,0,14	0/0:11,0:11:6.49:0,6,74	0/0:11,0:11:2.90:0,3,16	0/0:20,0:19:12.38:0,12,126	0/0:13,0:13:4.59:0,5,18	0/1:12,0:12:5.45:5,0,13	0/0:14,0:13:7.99:0,8,54	0/0:5,0:5:3.37:0,3,9	0/0:14,0:14:1.82:0,2,5	0/0:12,0:11:10.83:0,11,87	./.
chr10	16344183	.	GAA	G	4797.74	PASS	AB=1.000;AC=45;AF=0.804;AN=56;BaseQRankSum=6.691;DP=514;FS=4.932;HRun=3;HaplotypeScore=91.5095;InbreedingCoeff=0.6072;MQ=53.15;MQ0=25;MQRankSum=-3.973;QD=11.96;ReadPosRankSum=0.373;VQSLOD=1.5250;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:63.88:0,64,671	1/1:5,0:4:11.85:81,12,0	0/0:33,0:7:8.15:0,8,97	0/1:49,0:16:30.07:30,0,148	1/1:14,0:14:17.36:107,17,0	1/1:13,0:12:26.75:195,27,0	1/1:31,0:28:71.57:552,72,0	1/1:39,0:39:92.47:712,92,0	1/1:15,0:15:17.94:148,18,0	1/1:3,10:13:26.95:228,27,0	1/1:8,0:8:23.86:184,24,0	0/1:22,0:22:12.19:12,0,385	1/1:14,0:14:2.96:19,3,0	1/1:13,0:12:32.78:251,33,0	0/0:26,0:26:48.21:0,48,581	0/0:22,0:19:38.78:0,39,353	1/1:11,0:11:26.85:208,27,0	0/1:18,0:17:17.24:17,0,216	1/1:10,0:9:14.62:113,15,0	1/1:16,0:15:38.71:286,39,0	1/1:25,0:25:54.01:407,54,0	1/1:10,0:8:14.67:88,15,0	1/1:11,0:10:20.76:147,21,0	1/1:23,0:21:35.11:280,35,0	1/1:11,0:11:23.88:187,24,0	1/1:3,5:8:20.94:171,21,0	1/1:12,0:12:29.58:200,30,0	1/1:10,0:10:23.83:176,24,0
chr10	16344353	.	C	CAT	331.53	PASS	AB=0.835;AC=10;AF=0.192;AN=52;BaseQRankSum=0.480;DP=306;FS=14.966;HRun=0;HaplotypeScore=56.7200;InbreedingCoeff=-0.0714;MQ=102.75;MQ0=0;MQRankSum=-2.320;QD=4.14;ReadPosRankSum=-3.050;VQSLOD=-0.3548;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:51.17:0,51,827	1/1:1,1:2:3.01:60,3,0	0/0:20,0:20:49.28:0,49,832	0/0:23,0:23:60.17:0,60,884	0/1:5,2:7:47.74:48,0,49	0/0:7,0:7:6.02:0,6,97	0/1:24,1:25:30.72:31,0,371	0/0:4,0:4:9.03:0,9,147	0/0:7,0:7:9.03:0,9,146	0/1:7,1:9:42.83:43,0,212	0/1:2,2:4:13.96:54,0,14	0/0:35,0:35:93.30:0,93,1465	0/1:4,1:5:48.07:48,0,105	0/0:12,0:12:18.02:0,18,264	0/0:17,0:17:51.17:0,51,832	0/0:16,0:16:42.14:0,42,685	0/0:11,0:11:9.03:0,9,145	0/0:10,0:10:30.10:0,30,489	0/1:7,2:9:92.33:92,0,223	0/1:7,1:8:45.40:45,0,134	0/0:20,0:20:30.08:0,30,489	0/1:10,1:11:47.25:47,0,134	0/0:2,0:2:1.55:0,2,4	0/0:5,0:5:6.02:0,6,98	./.	0/0:8,0:8:21.07:0,21,342	0/0:6,0:6:12.04:0,12,195	./.
chr10	16345372	.	TCC	T	7831.21	PASS	AB=1.000;AC=43;AF=0.768;AN=56;BaseQRankSum=4.664;DP=489;FS=19.599;HRun=13;HaplotypeScore=114.4831;InbreedingCoeff=0.7796;MQ=72.41;MQ0=2;MQRankSum=-2.833;QD=18.73;ReadPosRankSum=6.126;VQSLOD=2.1799;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:4.81:0,5,30	1/1:0,4:4:9.01:87,9,0	0/1:15,0:11:32.28:32,0,95	0/0:19,0:14:3.63:0,4,126	1/1:3,14:17:33.03:320,33,0	1/1:7,19:28:46.21:420,46,0	1/1:3,9:14:12.37:229,12,0	1/1:3,18:22:56.37:487,56,0	1/1:2,26:28:67.65:643,68,0	1/1:5,0:5:5.97:51,6,0	1/1:10,7:18:37.47:315,37,0	0/0:11,0:11:9:0,9,93	1/1:5,19:24:50.66:471,51,0	1/1:2,12:15:32.78:302,33,0	0/0:14,0:14:12.93:0,13,102	0/0:9,0:10:20.45:0,20,155	1/1:2,23:25:54.56:524,55,0	0/0:8,0:7:12.44:0,12,97	1/1:7,8:15:26.99:252,27,0	1/1:6,11:18:35.93:341,36,0	1/1:3,22:25:48.07:465,48,0	1/1:1,24:25:60.05:581,60,0	1/1:3,18:22:45.07:436,45,0	1/1:7,16:23:56.60:497,57,0	1/1:2,7:9:21.03:203,21,0	1/1:7,19:26:44.46:508,44,0	1/1:3,20:23:33:320,33,0	1/1:3,13:16:36.04:349,36,0
chr10	16345854	.	C	CT	1729.65	PASS	AB=0.839;AC=18;AF=0.321;AN=56;BaseQRankSum=3.149;DP=690;FS=10.062;HRun=0;HaplotypeScore=169.4007;InbreedingCoeff=-0.4493;MQ=64.86;MQ0=7;MQRankSum=-5.347;QD=4.25;ReadPosRankSum=-5.496;VQSLOD=1.1193;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,102,1374	0/1:7,4:11:99:114,0,263	0/1:23,1:22:3.14:3,0,470	0/0:35,0:24:71.71:0,72,817	0/0:23,8:29:56.70:0,57,707	0/1:13,4:17:99:140,0,493	0/1:17,4:18:65.22:65,0,494	0/0:24,1:23:21.22:0,21,824	0/1:18,8:26:99:307,0,621	0/0:19,3:20:12.23:0,12,718	0/0:9,2:11:14.84:0,15,194	0/0:46,0:46:99:0,138,1861	0/1:23,7:29:99:203,0,747	0/1:35,4:38:80.16:80,0,1167	0/0:24,0:24:72.23:0,72,989	0/0:34,0:34:99:0,99,1286	0/1:13,4:17:50.47:50,0,478	0/0:17,0:17:48.15:0,48,654	0/1:25,2:24:21.58:22,0,727	0/1:11,6:15:99:180,0,332	0/1:48,3:49:1.75:2,0,1196	0/1:15,4:17:47.57:48,0,539	0/1:16,2:18:99:106,0,377	0/1:16,3:19:79.39:79,0,495	0/1:14,4:18:99:137,0,518	0/1:28,7:32:99:200,0,863	0/1:9,3:11:99:114,0,259	0/1:4,1:4:35.91:36,0,114
chr10	16346001	.	TC	T	7788.85	PASS	AB=0.668;AC=21;AF=0.375;AN=56;BaseQRankSum=12.632;DP=786;FS=1.671;HRun=4;HaplotypeScore=133.7166;InbreedingCoeff=-0.5940;MQ=56.53;MQ0=36;MQRankSum=3.838;QD=13.45;ReadPosRankSum=6.530;VQSLOD=3.0732;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:75.24:0,75,1032	0/1:2,8:9:11.23:261,0,11	0/0:26,0:9:23.92:0,24,261	0/0:22,0:7:14.92:0,15,178	0/1:11,6:15:84.07:84,0,179	0/1:6,8:13:99:195,0,122	0/1:19,29:45:99:677,0,438	0/1:22,12:32:99:328,0,725	0/1:10,19:27:99:570,0,234	0/1:20,17:34:99:473,0,487	0/1:5,10:15:30.90:258,0,31	0/0:47,0:47:99:0,132,1797	0/1:13,15:27:99:396,0,271	0/1:18,27:44:99:723,0,473	0/0:24,0:24:63.21:0,63,882	0/0:28,0:28:81.27:0,81,1134	0/1:12,13:23:99:339,0,257	0/0:27,0:27:75.25:0,75,1048	0/1:19,11:21:99:330,0,317	0/1:7,4:9:99:123,0,105	0/1:38,36:69:99:972,0,949	0/1:12,15:26:99:405,0,273	0/1:4,17:21:88.80:407,0,89	0/1:18,15:29:99:328,0,397	0/1:14,8:21:99:236,0,312	0/1:15,16:27:99:395,0,382	0/1:14,10:21:99:262,0,362	0/1:3,1:4:26.97:27,0,75
chr10	16346163	.	GC	G	14208.62	PASS	AB=0.607;AC=31;AF=0.554;AN=56;BaseQRankSum=4.598;DP=760;FS=10.154;HRun=1;HaplotypeScore=104.6600;InbreedingCoeff=0.1315;MQ=55.08;MQ0=23;MQRankSum=1.028;QD=24.88;ReadPosRankSum=5.106;VQSLOD=3.8293;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:34:96.33:0,96,1529	1/1:1,11:11:33.11:461,33,0	0/0:21,0:7:20.89:0,21,263	0/0:32,0:11:27.08:0,27,374	1/1:7,18:25:1.07:563,1,0	0/1:8,13:18:99:374,0,132	1/1:5,39:42:63.40:1457,63,0	1/1:1,20:20:60.19:822,60,0	0/1:7,19:24:77.69:731,0,78	0/1:6,27:30:19.13:833,0,19	1/1:3,7:10:21.07:294,21,0	0/0:35,1:36:66.40:0,66,1612	0/1:4,21:24:31.95:695,0,32	0/1:18,21:36:99:849,0,245	0/0:23,0:23:66.22:0,66,1047	0/0:20,0:20:60.17:0,60,912	0/1:10,25:32:99:758,0,192	0/0:22,0:22:66.23:0,66,1055	1/1:9,9:11:24.08:331,24,0	0/1:6,16:20:83.90:614,0,84	0/1:34,60:85:99:2213,0,296	1/1:11,9:13:27.09:374,27,0	0/1:5,7:11:68.84:267,0,69	0/1:12,22:32:99:721,0,200	0/1:17,10:19:48.08:419,0,48	1/1:10,15:19:0.28:581,0,0	1/1:9,16:23:12.23:727,12,0	1/1:0,3:3:9.03:126,9,0
chr10	16346693	.	A	AACAC	1656.76	PASS	AB=0.983;AC=27;AF=0.519;AN=52;BaseQRankSum=-0.093;DP=561;FS=7.112;HRun=0;HaplotypeScore=136.4449;InbreedingCoeff=0.3864;MQ=58.85;MQ0=13;MQRankSum=-0.622;QD=4.84;ReadPosRankSum=-1.107;VQSLOD=2.0238;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:36:6:0,6,91	0/0:8,0:9:8.94:0,9,109	./.	./.	0/0:17,0:17:15.04:0,15,210	1/1:14,9:22:3.01:70,3,0	1/1:22,4:29:14.50:189,15,0	1/1:23,0:22:7.77:60,8,0	1/1:12,7:20:8.82:153,9,0	0/0:15,0:15:3.01:0,3,46	0/1:10,0:10:11.91:12,0,126	0/0:18,0:21:9.02:0,9,118	1/1:12,0:12:12.51:223,13,0	1/1:13,0:13:9.01:109,9,0	0/0:14,0:14:14.81:0,15,206	0/0:18,0:17:17.99:0,18,248	0/0:18,0:24:29.65:0,30,389	0/1:25,0:23:39.13:39,0,84	1/1:13,0:11:6.01:96,6,0	0/1:16,0:15:40.21:42,0,40	1/1:30,0:33:21.49:297,21,0	1/1:11,4:16:3.01:63,3,0	1/1:13,5:18:5.71:113,6,0	0/1:40,3:44:68.79:280,0,69	1/1:11,8:20:5.72:83,6,0	0/0:20,0:20:2.65:0,3,45	0/1:25,0:25:4.92:5,0,173	0/0:4,0:4:3.01:0,3,45
chr10	16346728	.	A	ACACA	1509.46	PASS	AB=0.955;AC=26;AF=0.500;AN=52;BaseQRankSum=-2.324;DP=586;FS=4.322;HRun=0;HaplotypeScore=107.2379;InbreedingCoeff=0.4292;MQ=58.26;MQ0=15;MQRankSum=0.899;QD=4.87;ReadPosRankSum=-3.118;VQSLOD=1.4915;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:33:8.73:0,9,109	0/0:10,0:10:8.94:0,9,109	./.	./.	0/0:26,0:26:15.04:0,15,210	1/1:18,0:16:3.01:70,3,0	1/1:33,0:32:11.51:165,12,0	1/1:17,0:16:1.25:3,1,0	1/1:19,0:19:8.82:153,9,0	0/0:13,0:13:3.01:0,3,46	0/1:13,0:13:11.91:12,0,126	0/0:22,0:22:9.02:0,9,118	1/1:16,0:15:12.04:221,12,0	1/1:13,0:13:9.01:109,9,0	0/0:16,0:16:14.81:0,15,206	0/0:22,0:22:19.24:0,19,251	0/0:26,0:26:29.57:0,30,389	0/0:25,0:23:4.68:0,5,90	1/1:14,0:12:6.01:96,6,0	0/1:11,0:11:40.21:42,0,40	1/1:37,0:37:18.34:270,18,0	1/1:12,0:12:3.01:63,3,0	1/1:19,0:19:4.58:110,5,0	0/1:35,8:44:68.79:280,0,69	1/1:19,0:19:5.75:83,6,0	0/0:19,0:18:3:0,3,46	0/1:24,0:24:4.92:5,0,173	0/0:2,0:2:2.93:0,3,45
chr10	16346888	.	GCA	G	8566.36	PASS	AB=1.000;AC=43;AF=0.768;AN=56;BaseQRankSum=10.738;DP=620;FS=1.979;HRun=0;HaplotypeScore=84.9432;InbreedingCoeff=0.8980;MQ=57.61;MQ0=12;MQRankSum=1.830;QD=18.54;ReadPosRankSum=2.734;VQSLOD=4.6009;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,111,1777	1/1:0,8:8:18.06:223,18,0	0/0:41,0:14:6.02:0,6,81	0/1:34,0:17:0:0,0,91	1/1:5,20:23:42.13:520,42,0	1/1:10,11:22:20.90:237,21,0	1/1:3,15:17:24.07:294,24,0	1/1:7,20:27:59.52:631,60,0	1/1:6,9:15:8.70:111,9,0	1/1:6,16:22:51.10:611,51,0	1/1:5,14:20:26.92:311,27,0	0/0:17,1:18:8.03:0,8,574	1/1:2,17:20:29.93:348,30,0	1/1:1,15:16:18.06:223,18,0	0/0:14,0:14:33.10:0,33,511	0/0:18,0:18:48.15:0,48,760	1/1:5,15:20:30.09:372,30,0	0/0:19,0:19:47.14:0,47,690	1/1:3,18:20:50.91:521,51,0	1/1:2,13:14:15.05:186,15,0	1/1:7,27:33:54.11:669,54,0	1/1:1,14:15:39.12:483,39,0	1/1:2,14:16:26.99:334,27,0	1/1:7,18:25:39.12:483,39,0	1/1:5,13:20:38.79:437,39,0	1/1:6,22:27:42.82:679,43,0	1/1:3,20:23:45.14:557,45,0	1/1:4,13:17:27.08:335,27,0
chr10	16347016	.	T	TATACCC	17371.21	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=-5.143;DP=621;FS=2.446;HRun=0;HaplotypeScore=142.9698;InbreedingCoeff=0.9275;MQ=82.35;MQ0=0;MQRankSum=-13.330;QD=38.78;ReadPosRankSum=-0.058;VQSLOD=4.4971;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:96.29:0,96,1997	1/1:2,9:12:18.06:550,18,0	0/0:27,0:27:51.11:0,51,980	0/0:19,0:19:33.05:0,33,585	1/1:4,15:20:2.74:92,3,0	1/1:6,21:29:36.12:1185,36,0	1/1:10,16:26:35.97:1028,36,0	1/1:16,22:39:87.17:2243,87,0	1/1:3,12:15:24.08:806,24,0	1/1:10,16:27:60.21:1881,60,0	1/1:2,12:15:17.91:430,18,0	0/0:21,0:21:48.12:0,48,959	1/1:6,12:18:30.10:979,30,0	1/1:8,19:28:42.14:1315,42,0	0/0:18,0:18:51.15:0,51,1052	0/0:19,0:19:51.16:0,51,1066	1/1:10,13:25:27.09:891,27,0	0/0:28,0:28:72.13:0,72,1380	1/1:17,8:25:42.12:1158,42,0	1/1:3,13:19:15:416,15,0	1/1:10,10:21:18.01:596,18,0	1/1:4,9:14:14.98:420,15,0	1/1:6,17:25:12.04:315,12,0	1/1:8,10:19:5.91:119,6,0	1/1:4,13:20:27.02:754,27,0	1/1:5,12:17:36.05:947,36,0	1/1:7,13:20:27.09:842,27,0	1/1:3,6:9:12.04:404,12,0
chr10	16349310	.	G	GT	19985.76	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=-7.234;DP=728;FS=2.091;HRun=1;HaplotypeScore=94.9030;InbreedingCoeff=0.9971;MQ=94.29;MQ0=0;MQRankSum=-5.039;QD=39.81;ReadPosRankSum=2.819;VQSLOD=5.3179;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,129,1622	1/1:0,17:17:45.11:648,45,0	0/0:42,0:42:99:0,117,1485	0/0:24,0:24:59.86:0,60,717	1/1:0,35:35:99:1501,102,0	1/1:1,22:23:60.20:878,60,0	1/1:0,20:20:54.18:809,54,0	1/1:2,28:30:84.27:1237,84,0	1/1:1,27:28:81.27:1212,81,0	1/1:0,33:33:99:1459,99,0	1/1:0,19:19:51.13:739,51,0	0/0:26,0:26:78.24:0,78,998	1/1:2,27:29:66.20:988,66,0	1/1:5,26:31:75.25:1123,75,0	0/0:41,0:41:99:0,120,1543	0/0:31,0:31:93.29:0,93,1195	1/1:0,27:27:72.24:1079,72,0	0/0:17,0:17:48.16:0,48,622	1/1:2,34:36:99:1477,99,0	1/1:1,17:18:54.14:772,54,0	1/1:1,21:22:54.18:809,54,0	1/1:2,14:16:42.07:602,42,0	1/1:0,16:16:45.15:674,45,0	1/1:1,31:32:81.27:1213,81,0	1/1:1,16:17:42.14:629,42,0	1/1:1,20:21:60.19:878,60,0	1/1:2,23:25:69.23:1031,69,0	1/1:0,7:7:15.05:225,15,0
chr10	16349784	.	AT	A	17692.04	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=9.750;DP=727;FS=2.185;HRun=4;HaplotypeScore=73.9637;InbreedingCoeff=0.9998;MQ=78.60;MQ0=0;MQRankSum=-5.181;QD=33.01;ReadPosRankSum=2.138;VQSLOD=5.6049;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,129,1804	1/1:0,9:9:27.08:324,27,0	0/0:29,0:29:76.13:0,76,1006	0/0:22,0:22:63.18:0,63,829	1/1:0,23:23:69.21:828,69,0	1/1:3,26:29:78.24:936,78,0	1/1:2,19:21:54.17:648,54,0	1/1:1,30:31:90.26:1069,90,0	1/1:2,27:29:72.22:864,72,0	1/1:0,39:39:99:1378,117,0	1/1:1,19:20:54.17:648,54,0	0/0:27,0:27:81.25:0,81,1116	1/1:0,27:27:81.25:972,81,0	1/1:0,18:18:39.12:468,39,0	0/0:29,0:29:87.28:0,87,1203	0/0:13,0:13:39.13:0,39,546	1/1:1,27:28:78.24:936,78,0	0/0:27,0:27:81.27:0,81,1132	1/1:1,18:19:51.15:610,51,0	1/1:2,39:41:99:1332,111,0	1/1:2,19:21:51.16:612,51,0	1/1:1,30:31:90.28:1080,90,0	1/1:0,31:31:87.27:1042,87,0	1/1:0,20:20:54.16:648,54,0	1/1:2,25:27:75.23:900,75,0	1/1:2,28:30:84.24:995,84,0	1/1:1,27:28:81.25:971,81,0	1/1:1,13:14:36.11:432,36,0
chr10	16349945	.	C	CT	21444.21	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=19.080;DP=802;FS=4.805;HRun=1;HaplotypeScore=184.0832;InbreedingCoeff=0.9895;MQ=82.02;MQ0=0;MQRankSum=-7.496;QD=36.97;ReadPosRankSum=1.554;VQSLOD=4.2701;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,126,1582	1/1:0,14:14:39.13:542,39,0	0/0:27,0:27:78.25:0,78,1012	0/0:24,0:24:60.18:0,60,750	1/1:4,23:27:67.06:902,67,0	1/1:1,21:22:66.15:895,66,0	1/1:7,30:37:99:1391,105,0	1/1:10,36:46:99:1806,129,0	1/1:0,20:20:54.18:746,54,0	1/1:5,24:29:84.14:1054,84,0	1/1:2,23:25:63.21:876,63,0	0/0:41,0:41:99:0,123,1576	1/1:1,31:32:90.30:1256,90,0	1/1:2,27:29:66.22:913,66,0	0/0:47,0:47:99:0,135,1721	0/0:22,0:22:66.19:0,66,829	1/1:0,32:32:90.30:1250,90,0	0/0:18,0:18:54.18:0,54,701	1/1:3,20:23:66.21:891,66,0	1/1:2,28:30:87.24:1178,87,0	1/1:0,42:42:99:1404,102,0	1/1:2,30:32:87.24:1184,87,0	1/1:3,23:26:69.23:954,69,0	1/1:1,27:28:78.26:1082,78,0	1/1:4,18:22:57.18:768,57,0	1/1:3,24:27:81.18:1088,81,0	1/1:1,31:31:81.27:1136,81,0	1/1:0,5:5:9.03:128,9,0
chr10	16351290	.	AG	A	17972.47	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=10.911;DP=693;FS=1.385;HRun=2;HaplotypeScore=71.7689;InbreedingCoeff=0.9992;MQ=88.51;MQ0=0;MQRankSum=-4.889;QD=35.87;ReadPosRankSum=2.027;VQSLOD=5.4687;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,123,1839	1/1:0,11:11:33.11:428,33,0	0/0:26,0:27:68.88:0,69,992	0/0:25,0:25:63.47:0,63,760	1/1:1,21:22:57.18:736,57,0	1/1:0,24:24:60.20:779,60,0	1/1:1,19:20:57.18:738,57,0	1/1:1,37:38:99:1385,108,0	1/1:0,20:20:54.18:701,54,0	1/1:0,34:34:99:1309,102,0	1/1:1,19:20:57.18:738,57,0	0/0:24,0:24:72.24:0,72,1077	1/1:0,23:23:63.20:817,63,0	1/1:0,28:28:75.24:970,75,0	0/0:34,0:34:99:0,102,1463	0/0:27,0:27:81.27:0,81,1210	1/1:1,15:16:42.14:545,42,0	0/0:13,0:13:36.10:0,36,513	1/1:0,34:34:99:1284,99,0	1/1:0,33:33:93.30:1207,93,0	1/1:1,31:32:90.29:1168,90,0	1/1:0,22:22:59.41:747,59,0	1/1:0,16:16:39.13:506,39,0	1/1:1,18:19:48.16:623,48,0	1/1:0,16:16:39.13:506,39,0	1/1:0,26:26:78.24:998,78,0	1/1:0,40:40:99:1518,117,0	1/1:0,7:7:21.07:273,21,0
chr10	16352991	.	C	CT	18544.83	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=-14.672;DP=646;FS=1.150;HRun=3;HaplotypeScore=54.1806;InbreedingCoeff=0.9997;MQ=87.35;MQ0=1;MQRankSum=-5.846;QD=36.87;ReadPosRankSum=2.414;VQSLOD=5.3648;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:78.24:0,78,936	1/1:2,10:12:33.11:456,33,0	0/0:24,0:24:63.15:0,63,720	0/0:22,0:22:60.12:0,60,684	1/1:1,24:25:72.20:986,72,0	1/1:0,28:28:75.25:1050,75,0	1/1:1,14:15:42.14:588,42,0	1/1:4,27:31:78.25:1077,78,0	1/1:1,20:21:47.77:786,48,0	1/1:3,22:25:72.22:981,72,0	1/1:2,32:34:96.28:1322,96,0	0/0:14,0:14:42.13:0,42,504	1/1:1,22:23:60.20:840,60,0	1/1:1,18:19:51.17:714,51,0	0/0:16,0:16:48.13:0,48,565	0/0:19,0:18:51.14:0,51,601	1/1:0,20:19:48.16:672,48,0	0/0:22,0:22:57.13:0,57,657	1/1:1,9:10:27.09:377,27,0	1/1:2,22:24:63.09:817,63,0	1/1:1,27:28:72.24:1008,72,0	1/1:1,21:22:57.19:798,57,0	1/1:0,39:39:99:1638,117,0	1/1:0,20:20:54.18:756,54,0	1/1:1,31:32:84.28:1176,84,0	1/1:3,24:27:72.23:990,72,0	1/1:0,30:30:75.25:1049,75,0	1/1:7,11:18:33.11:462,33,0
chr10	16353218	.	TA	T	8104.67	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=6.076;DP=544;FS=1.961;HRun=11;HaplotypeScore=60.8800;InbreedingCoeff=0.9652;MQ=75.43;MQ0=2;MQRankSum=-0.767;QD=19.91;ReadPosRankSum=2.899;VQSLOD=5.9686;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,1:35:62.32:0,62,812	1/1:2,4:6:8.99:74,9,0	0/0:14,0:14:11.17:0,11,120	0/0:17,0:17:7.26:0,7,179	1/1:0,23:23:56.82:460,57,0	1/1:1,18:19:47.95:394,48,0	1/1:1,10:11:20.97:172,21,0	1/1:2,20:22:59.91:490,60,0	1/1:3,18:21:50.92:419,51,0	1/1:3,18:21:50.93:419,51,0	1/1:3,24:27:68.80:558,69,0	0/0:18,1:19:23.46:0,23,448	1/1:2,18:20:50.94:419,51,0	1/1:0,15:15:44.95:369,45,0	0/0:10,0:10:27.07:0,27,288	0/0:15,0:15:33.08:0,33,352	1/1:2,34:36:95.88:788,96,0	0/0:24,0:24:51.09:0,51,525	1/1:5,15:20:44.92:368,45,0	1/1:4,18:22:56.92:467,57,0	1/1:0,9:9:23.97:197,24,0	1/1:2,16:18:38.92:320,39,0	1/1:3,25:28:65.70:542,66,0	1/1:3,12:15:32.96:271,33,0	1/1:2,18:20:41.95:345,42,0	1/1:5,14:19:41.94:345,42,0	1/1:3,21:24:56.93:468,57,0	1/1:1,10:11:26.97:222,27,0
chr10	16356447	.	AGG	A	5250.12	PASS	AB=0.543;AC=28;AF=0.500;AN=56;BaseQRankSum=5.923;DP=638;FS=1.625;HRun=10;HaplotypeScore=113.4946;InbreedingCoeff=0.8698;MQ=73.18;MQ0=17;MQRankSum=-0.520;QD=21.26;ReadPosRankSum=1.319;VQSLOD=4.1135;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:84.27:0,84,1296	0/0:2,0:5:7.71:0,8,37	0/0:93,0:34:40.71:0,41,590	0/0:77,0:24:48.63:0,49,447	0/0:5,0:24:45.16:0,45,200	1/1:7,12:19:51.10:541,51,0	1/1:3,14:17:44.84:466,45,0	1/1:9,7:16:2.20:345,2,0	1/1:12,6:18:43.84:465,44,0	0/0:3,0:27:58.57:0,59,246	0/1:3,0:15:0.80:1,0,98	0/0:18,0:18:51.17:0,51,781	1/1:3,11:14:30.06:314,30,0	1/1:4,13:17:41.54:416,42,0	0/0:11,0:13:30.06:0,30,447	0/0:16,0:17:44.51:0,45,667	0/0:4,0:25:26.27:0,26,132	0/0:18,0:17:48.06:0,48,675	1/1:3,9:12:33.07:353,33,0	1/1:8,12:18:38.98:385,39,0	1/1:4,6:10:27.02:276,27,0	1/1:1,25:25:54.14:590,54,0	1/1:5,9:14:27.50:282,28,0	1/1:7,4:11:27.04:281,27,0	1/1:10,11:21:51.07:532,51,0	0/0:7,0:27:15.20:0,15,128	0/1:2,0:16:3.70:4,0,40	0/0:0,0:12:19.18:0,19,72
chr10	16356458	.	C	CA	5263.08	PASS	AB=1.000;AC=27;AF=0.482;AN=56;BaseQRankSum=7.144;DP=664;FS=7.052;HRun=9;HaplotypeScore=112.6372;InbreedingCoeff=0.9069;MQ=68.19;MQ0=17;MQRankSum=-1.833;QD=16.60;ReadPosRankSum=0.461;VQSLOD=4.1594;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:38:99:0,101,857	0/0:7,0:7:14.99:0,15,129	0/0:89,1:31:32.80:0,33,379	0/1:74,0:21:61.43:61,0,119	0/0:24,0:24:54.62:0,55,463	1/1:11,13:24:47.34:624,47,0	1/1:8,9:17:8.42:321,8,0	1/1:18,7:25:63.09:636,63,0	1/1:9,5:15:8.27:295,8,0	0/0:30,0:30:44.93:0,45,546	0/0:13,0:13:35.77:0,36,292	0/0:19,0:19:47.90:0,48,406	1/1:11,6:17:30.04:295,30,0	1/1:8,9:17:40.61:407,41,0	0/0:12,0:12:23.98:0,24,207	0/0:19,0:19:47.99:0,48,416	0/0:26,0:26:68.98:0,69,591	0/0:14,0:13:38.92:0,39,328	1/1:8,9:17:50.37:491,50,0	1/1:8,11:17:31.60:349,32,0	1/1:7,4:11:24.04:252,24,0	1/1:15,12:26:36.09:387,36,0	1/1:5,9:14:27.05:277,27,0	1/1:14,2:16:31.31:299,31,0	1/1:9,13:22:57.05:569,57,0	0/0:23,0:23:44.92:0,45,380	0/0:19,0:19:35.84:0,36,301	0/0:11,0:12:29.03:0,29,238
chr10	16358130	.	A	AG	7809.73	PASS	AB=0.833;AC=42;AF=0.750;AN=56;BaseQRankSum=-8.825;DP=515;FS=1.780;HRun=8;HaplotypeScore=57.3096;InbreedingCoeff=0.7743;MQ=77.19;MQ0=1;MQRankSum=-0.817;QD=20.77;ReadPosRankSum=0.157;VQSLOD=4.6718;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:93.04:0,93,850	1/1:3,0:3:3:25,3,0	0/0:21,0:21:47.93:0,48,412	0/1:19,0:18:1.56:2,0,143	1/1:6,14:20:17.62:442,18,0	1/1:7,18:25:45.13:519,45,0	1/1:5,19:24:51.15:589,51,0	1/1:11,12:24:33.10:380,33,0	1/1:4,16:20:48.14:554,48,0	1/1:5,15:20:17.66:456,18,0	1/1:1,3:4:6.02:69,6,0	0/0:18,0:18:47.98:0,48,431	1/1:3,21:24:60.15:673,60,0	1/1:3,20:23:22.74:448,23,0	0/0:18,0:18:48.03:0,48,439	0/0:20,1:21:19.40:0,19,432	1/1:5,19:24:26.70:557,27,0	0/0:24,0:24:66.03:0,66,604	1/1:6,9:15:24.04:263,24,0	0/1:6,6:12:9.33:155,0,9	1/1:8,19:27:48.14:554,48,0	1/1:3,14:17:36.11:414,36,0	1/1:2,3:5:9.03:104,9,0	1/1:4,16:20:48.14:554,48,0	1/1:0,7:7:12.04:139,12,0	1/1:4,12:16:12.13:357,12,0	1/1:3,15:17:20.68:490,21,0	1/1:0,8:8:6.02:69,6,0
chr10	16359431	.	GT	G	13257.31	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=12.440;DP=628;FS=3.503;HRun=6;HaplotypeScore=64.6857;InbreedingCoeff=0.9914;MQ=82.08;MQ0=0;MQRankSum=-4.481;QD=28.76;ReadPosRankSum=0.883;VQSLOD=5.5713;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,102,1342	1/1:0,5:5:12.03:129,12,0	0/0:19,0:19:44.63:0,45,562	0/0:16,0:16:38.73:0,39,487	1/1:2,19:21:54.14:580,54,0	1/1:2,22:24:63.16:677,63,0	1/1:0,27:27:75.19:806,75,0	1/1:2,23:25:69.02:701,69,0	1/1:1,20:21:54.14:580,54,0	1/1:0,36:36:99:1161,108,0	1/1:0,16:16:48.12:516,48,0	0/0:26,0:26:78.25:0,78,1019	1/1:1,20:21:57.14:613,57,0	1/1:1,15:16:33.08:355,33,0	0/0:22,0:22:60.18:0,60,775	0/0:20,0:20:60.20:0,60,789	1/1:0,21:21:54.14:580,54,0	0/0:28,0:28:81.25:0,81,1050	1/1:1,13:14:39.10:419,39,0	1/1:6,22:28:72.14:755,72,0	1/1:1,27:28:75.19:806,75,0	1/1:3,22:25:60.15:645,60,0	1/1:1,22:23:66.17:709,66,0	1/1:5,22:27:66.16:709,66,0	1/1:1,24:25:72.18:774,72,0	1/1:1,25:26:75.19:806,75,0	1/1:1,25:26:72.18:774,72,0	1/1:1,5:6:15.04:161,15,0
chr10	16363112	.	T	TA	8077.72	PASS	AB=1.000;AC=43;AF=0.768;AN=56;BaseQRankSum=-8.793;DP=343;FS=6.015;HRun=8;HaplotypeScore=29.6262;InbreedingCoeff=0.8509;MQ=73.04;MQ0=0;MQRankSum=-0.466;QD=28.54;ReadPosRankSum=0.505;VQSLOD=4.6753;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:24.01:0,24,219	1/1:2,4:6:12.04:139,12,0	0/0:6,0:6:8.81:0,9,78	0/1:5,0:5:15.82:16,0,22	1/1:2,24:26:66.15:747,66,0	1/1:0,12:13:35.97:395,36,0	1/1:0,7:7:18.05:208,18,0	1/1:6,19:25:54.11:588,54,0	1/1:1,7:8:21.06:242,21,0	1/1:2,16:18:48.14:554,48,0	1/1:0,17:17:48.14:554,48,0	0/0:10,0:10:27.01:0,27,247	1/1:0,14:14:39.12:450,39,0	1/1:0,2:2:6.02:69,6,0	0/0:12,0:12:36.02:0,36,330	0/0:7,0:7:21:0,21,188	1/1:4,16:20:39.12:450,39,0	0/0:16,0:16:30.01:0,30,274	1/1:2,12:14:36.11:415,36,0	1/1:3,7:10:24.04:260,24,0	1/1:0,8:8:24.07:277,24,0	1/1:0,8:8:21.06:242,21,0	1/1:0,10:10:30.09:346,30,0	1/1:0,3:3:9.03:104,9,0	1/1:3,8:12:26.91:291,27,0	1/1:1,13:14:39.12:450,39,0	1/1:3,15:18:42.12:483,42,0	1/1:0,24:24:69.21:796,69,0
chr10	16365892	.	TG	T	19508.56	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=11.386;DP=723;FS=2.301;HRun=1;HaplotypeScore=92.9464;InbreedingCoeff=0.9996;MQ=55.65;MQ0=14;MQRankSum=0.677;QD=36.95;ReadPosRankSum=1.285;VQSLOD=5.1313;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:87.12:0,87,1251	1/1:0,11:11:33.07:439,33,0	0/0:36,2:19:56.91:0,57,795	0/0:27,0:20:57.19:0,57,868	1/1:1,24:25:66.17:881,66,0	1/1:1,29:30:69.18:942,69,0	1/1:3,22:24:61.75:831,62,0	1/1:1,37:36:99:1371,108,0	1/1:0,32:32:90.30:1258,90,0	1/1:1,32:32:96.29:1291,96,0	1/1:1,19:20:57.09:751,57,0	0/0:22,0:22:63.20:0,63,962	1/1:0,30:30:84.28:1174,84,0	1/1:0,21:21:63.21:881,63,0	0/0:29,0:29:84.27:0,84,1292	0/0:29,0:29:87.28:0,87,1337	1/1:2,14:16:45.07:566,45,0	0/0:20,0:19:57.15:0,57,861	1/1:1,23:23:46.94:870,47,0	1/1:0,32:32:93.27:1271,93,0	1/1:0,23:23:66.22:922,66,0	1/1:0,21:21:54.14:733,54,0	1/1:0,25:25:57.85:797,58,0	1/1:0,21:21:51.17:712,51,0	1/1:0,37:37:99:1522,111,0	1/1:0,22:22:60.17:817,60,0	1/1:4,25:29:87.25:1162,87,0	1/1:1,12:13:24.07:318,24,0
chr10	16365905	.	T	TTTG	5494.37	PASS	AB=0.750;AC=16;AF=0.286;AN=56;BaseQRankSum=1.731;DP=720;FS=3.149;HRun=0;HaplotypeScore=171.2997;InbreedingCoeff=0.7816;MQ=55.14;MQ0=12;MQRankSum=-8.888;QD=24.20;ReadPosRankSum=-2.793;VQSLOD=4.5335;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:23:33.05:0,33,393	0/1:6,6:12:19.24:328,0,19	0/0:34,0:15:3.01:0,3,40	0/0:23,0:17:6:0,6,63	1/1:17,8:26:33.56:519,34,0	0/0:30,0:31:51.07:0,51,617	0/0:21,0:20:24.08:0,24,322	0/0:38,0:36:39.09:0,39,468	0/0:30,0:30:60.18:0,60,790	1/1:28,8:34:34.36:602,34,0	1/1:14,8:23:30.09:490,30,0	0/0:23,0:23:36.08:0,36,464	0/0:29,0:30:56.73:0,57,698	0/0:21,0:21:33.11:0,33,443	0/0:28,0:28:57.17:0,57,738	0/0:30,0:30:54.17:0,54,711	1/1:7,9:17:27.09:520,27,0	0/0:18,0:17:18.02:0,18,221	0/0:25,0:24:21.07:0,21,282	0/0:30,0:30:54.16:0,54,696	0/0:22,0:23:45.02:0,45,503	0/0:19,0:19:33.07:0,33,421	0/0:24,0:24:45.06:0,45,602	0/0:21,0:22:26.93:0,27,362	1/1:26,1:42:69.68:951,70,0	0/1:16,4:20:19.23:285,0,19	1/1:12,23:35:75.26:1401,75,0	1/1:11,4:15:24.05:398,24,0
chr10	16368035	.	C	CAG	11002.07	PASS	AB=0.604;AC=23;AF=0.411;AN=56;BaseQRankSum=3.736;DP=737;FS=0.310;HRun=0;HaplotypeScore=106.9045;InbreedingCoeff=0.7573;MQ=75.52;MQ0=2;MQRankSum=1.836;QD=31.08;ReadPosRankSum=1.525;VQSLOD=6.9042;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,120,1462	0/0:5,0:5:6.02:0,6,74	0/0:31,0:30:27.83:0,28,475	0/0:36,0:32:9.60:0,10,472	0/0:25,0:25:63.20:0,63,776	1/1:4,23:27:57.19:930,57,0	0/1:6,14:21:0.82:502,0,1	1/1:4,18:23:20.25:834,20,0	1/1:6,19:25:17.25:795,17,0	0/0:28,0:28:69.20:0,69,832	0/0:23,0:23:60.19:0,60,738	0/0:25,0:25:54.16:0,54,654	1/1:6,23:30:63.22:1028,63,0	0/1:11,17:30:25.72:637,0,26	0/0:33,0:33:78.23:0,78,948	0/0:16,0:17:47.97:0,48,555	0/0:22,0:24:65.87:0,66,767	0/0:16,0:18:50.82:0,51,581	1/1:7,11:20:36.10:561,36,0	1/1:10,22:32:4.39:1097,4,0	1/1:9,27:35:7.40:1148,7,0	0/1:11,18:29:19.68:717,0,20	1/1:7,26:33:72.25:1174,72,0	1/1:3,18:21:48.16:783,48,0	1/1:7,19:27:17.25:795,17,0	0/0:24,0:25:69.02:0,69,804	0/0:26,0:27:62.97:0,63,723	0/0:17,0:17:51.16:0,51,628
chr10	16368560	.	A	AAAAG	11521.68	PASS	AB=1.000;AC=43;AF=0.768;AN=56;BaseQRankSum=0.233;DP=572;FS=5.428;HRun=0;HaplotypeScore=102.6961;InbreedingCoeff=0.9054;MQ=71.83;MQ0=3;MQRankSum=-2.711;QD=24.88;ReadPosRankSum=-1.481;VQSLOD=4.2248;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:70.46:0,70,1211	1/1:0,12:12:20.90:410,21,0	0/0:20,0:20:22.50:0,23,349	0/1:19,0:14:5.36:5,0,192	1/1:2,15:24:44.14:681,44,0	1/1:0,1:24:54.18:796,54,0	1/1:2,0:25:33.06:446,33,0	1/1:2,0:32:84.82:903,85,0	1/1:0,0:17:20.97:325,21,0	1/1:3,16:22:56.86:787,57,0	1/1:2,23:28:60.88:1228,61,0	0/0:12,0:12:29.90:0,30,393	1/1:3,0:18:21.02:320,21,0	1/1:2,1:14:8.98:137,9,0	0/0:14,0:14:42.09:0,42,578	0/0:19,0:19:52.36:0,52,732	1/1:0,22:28:27.09:664,27,0	0/0:10,0:10:27.06:0,27,420	1/1:3,1:16:43.18:511,43,0	1/1:5,0:18:32.99:441,33,0	1/1:3,2:29:38.16:531,38,0	1/1:1,0:17:42.29:472,42,0	1/1:2,1:19:31.73:439,32,0	1/1:3,0:20:24.55:337,25,0	1/1:1,0:14:21.96:297,22,0	1/1:3,25:30:59.75:1014,60,0	1/1:2,14:19:17.95:325,18,0	1/1:4,8:14:18.06:453,18,0
chr10	16368940	.	G	GT	7276.33	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-4.828;DP=613;FS=19.264;HRun=8;HaplotypeScore=78.1469;InbreedingCoeff=0.9992;MQ=82.53;MQ0=0;MQRankSum=-2.477;QD=27.99;ReadPosRankSum=0.266;VQSLOD=3.3265;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:77.41:0,77,667	0/0:15,0:15:39.02:0,39,356	0/0:27,0:26:46.78:0,47,405	0/0:18,0:18:32.93:0,33,287	0/0:35,0:35:90.04:0,90,823	1/1:0,7:7:21.06:242,21,0	1/1:0,8:9:27.08:310,27,0	1/1:9,27:36:78.23:899,78,0	1/1:1,19:20:42.12:485,42,0	0/0:24,0:24:60:0,60,538	0/0:25,0:25:72.04:0,72,657	0/0:22,0:22:51.02:0,51,467	1/1:1,20:21:54.16:623,54,0	1/1:2,13:15:33.10:381,33,0	0/0:19,0:19:45.02:0,45,412	0/0:17,0:17:44.99:0,45,401	0/0:38,0:38:95.99:0,96,862	0/0:20,0:20:50.22:0,50,439	1/1:1,13:15:41.93:445,42,0	1/1:3,25:28:66.11:725,66,0	1/1:4,19:23:54.16:623,54,0	1/1:0,13:13:39.07:435,39,0	1/1:2,15:18:45.13:518,45,0	1/1:0,27:27:72.21:831,72,0	1/1:5,23:28:64.52:759,65,0	0/0:22,0:22:62.96:0,63,566	0/0:30,0:30:81:0,81,730	0/0:13,0:13:39.02:0,39,356
chr10	16369562	.	GA	G	7164.18	PASS	AB=0.699;AC=40;AF=0.714;AN=56;BaseQRankSum=8.871;DP=652;FS=3.338;HRun=12;HaplotypeScore=82.5951;InbreedingCoeff=0.6389;MQ=75.97;MQ0=2;MQRankSum=-1.136;QD=14.19;ReadPosRankSum=0.925;VQSLOD=5.4690;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:71.45:0,71,886	1/1:2,17:19:35.84:279,36,0	0/1:25,0:22:20.57:21,0,133	0/0:17,0:18:2.15:0,2,116	1/1:5,14:19:32.82:255,33,0	1/1:3,17:20:36.52:333,37,0	1/1:8,17:25:47.77:371,48,0	1/1:4,22:27:64.68:487,65,0	1/1:8,25:33:24.58:482,25,0	1/1:8,22:31:65.22:495,65,0	1/1:5,15:22:45.90:337,46,0	0/0:23,2:26:19.49:0,19,542	0/1:6,17:23:15.97:216,0,16	1/1:2,21:23:56.77:441,57,0	0/0:27,0:27:63.12:0,63,634	0/0:20,0:22:59.79:0,60,577	1/1:4,27:31:65.74:511,66,0	0/0:13,0:14:35.90:0,36,347	1/1:7,21:28:41.57:489,42,0	0/1:6,10:16:1.54:163,0,2	1/1:8,11:20:31.57:237,32,0	1/1:2,17:20:43.87:331,44,0	1/1:5,19:24:17.12:317,17,0	1/1:4,14:19:19.39:263,19,0	1/1:6,20:26:56.77:441,57,0	1/1:8,12:20:8.39:248,8,0	1/1:7,17:24:44.76:348,45,0	0/1:3,5:8:9.50:98,0,9
chr10	16370606	.	AAAG	A	1332.46	PASS	AB=0.948;AC=18;AF=0.321;AN=56;BaseQRankSum=4.030;DP=516;FS=56.964;HRun=0;HaplotypeScore=82.8907;InbreedingCoeff=-0.1929;MQ=47.73;MQ0=29;MQRankSum=2.897;QD=5.20;ReadPosRankSum=0.184;VQSLOD=-0.3602;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:29:54.37:0,54,671	0/0:8,0:7:17.52:0,18,168	1/1:3,0:2:0.89:11,1,0	0/0:3,0:1:2.84:0,3,14	0/0:29,0:29:42:0,42,602	0/1:23,0:21:19.96:119,0,20	0/1:19,1:18:33.19:52,0,33	0/1:26,4:29:31.27:228,0,31	0/1:9,3:11:15.77:176,0,16	0/1:11,0:10:16.26:16,0,171	0/1:16,0:14:8.68:9,0,205	0/0:18,0:18:46.90:0,47,492	0/1:12,0:12:43.45:116,0,43	1/1:9,3:12:16.67:129,17,0	0/0:21,0:19:18.48:0,18,337	0/0:14,0:13:10.82:0,11,284	0/0:38,0:35:61.56:0,62,798	0/0:32,0:32:24.94:0,25,823	0/1:15,1:12:28.74:87,0,29	0/1:16,1:17:51.30:119,0,51	0/1:10,1:10:3.57:63,0,4	0/1:14,0:14:51.08:51,0,79	0/1:15,0:15:30.65:31,0,63	0/1:21,5:25:30.15:242,0,30	0/1:18,0:16:27.69:45,0,28	0/0:25,0:24:31.74:0,32,546	0/0:19,0:18:1.88:0,2,324	0/0:21,0:17:36.93:0,37,266
chr10	16370609	.	GAAA	G	2476.32	PASS	AB=0.772;AC=24;AF=0.429;AN=56;BaseQRankSum=-0.902;DP=515;FS=4.648;HRun=17;HaplotypeScore=81.4739;InbreedingCoeff=0.8074;MQ=48.86;MQ0=29;MQRankSum=3.971;QD=11.06;ReadPosRankSum=3.943;VQSLOD=0.4760;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:30:62.95:0,63,731	0/0:8,0:7:14.97:0,15,167	0/0:4,0:3:5.90:0,6,22	0/0:3,0:1:3.01:0,3,43	0/0:27,0:29:61.59:0,62,751	1/1:6,12:19:35.63:328,36,0	1/1:9,8:16:0.89:139,1,0	1/1:13,18:31:57.29:491,57,0	1/1:10,2:11:15.79:194,16,0	0/0:11,0:10:24.70:0,25,266	0/0:15,0:13:33.15:0,33,420	0/0:18,0:18:47.84:0,48,677	1/1:9,2:12:14.94:120,15,0	1/1:4,10:14:14.98:150,15,0	0/0:19,0:18:40.56:0,41,458	0/0:12,0:13:30.78:0,31,356	0/0:37,0:35:80.95:0,81,917	0/0:31,0:32:78.97:0,79,985	0/1:18,0:17:1.48:144,0,1	0/1:5,11:16:6.01:141,0,6	1/1:5,4:8:11.58:101,12,0	1/1:5,7:12:14.44:133,14,0	1/1:6,7:14:17.59:171,18,0	1/1:11,14:25:39.51:436,40,0	1/1:5,10:15:13.27:137,13,0	0/0:21,0:23:59.27:0,59,600	0/0:15,0:17:39.83:0,40,409	0/0:23,0:19:44.09:0,44,487
chr10	16370788	.	G	GACAGCTC	10188.10	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-4.048;DP=472;FS=2.501;HRun=0;HaplotypeScore=124.7516;InbreedingCoeff=0.9542;MQ=76.06;MQ0=0;MQRankSum=-11.060;QD=48.51;ReadPosRankSum=-3.318;VQSLOD=4.2619;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:66.17:0,66,1348	0/0:9,0:9:21.04:0,21,398	0/0:12,0:12:12.06:0,12,357	0/0:13,0:13:20.43:0,20,378	0/0:11,0:11:27.09:0,27,613	1/1:11,5:16:24.08:776,24,0	1/1:16,5:22:27.07:830,27,0	1/1:25,4:29:63.20:1542,63,0	1/1:11,11:22:42.13:1476,42,0	0/0:11,0:11:24.08:0,24,522	0/0:8,0:8:21.06:0,21,447	0/0:24,0:24:63.20:0,63,1420	1/1:2,2:4:9.03:274,9,0	1/1:4,7:13:36.12:1324,36,0	0/0:16,0:16:42.14:0,42,970	0/0:21,0:20:57.15:0,57,1217	0/0:36,0:36:87.23:0,87,1837	0/0:25,0:25:63.18:0,63,1372	1/1:16,3:19:30.09:822,30,0	1/1:3,2:5:6.02:167,6,0	1/1:20,4:24:20.85:540,21,0	1/1:7,4:11:18.06:664,18,0	1/1:9,5:14:24.04:736,24,0	1/1:17,8:25:33.02:813,33,0	1/1:4,2:6:6.02:224,6,0	0/0:19,0:19:42.12:0,42,881	0/0:15,0:15:36.09:0,36,772	0/0:16,0:16:42.14:0,42,918
chr10	16370826	.	C	CT	2824.70	PASS	AB=0.736;AC=24;AF=0.429;AN=56;BaseQRankSum=-3.493;DP=536;FS=0.413;HRun=13;HaplotypeScore=96.1964;InbreedingCoeff=0.6440;MQ=70.03;MQ0=1;MQRankSum=-0.732;QD=11.77;ReadPosRankSum=-3.980;VQSLOD=2.2669;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,3:29:22.51:0,23,301	0/0:3,0:11:14.21:0,14,41	0/0:17,0:13:3.84:0,4,44	0/1:17,0:11:9.57:10,0,33	0/0:4,0:16:20.33:0,20,59	1/1:4,13:17:30.03:279,30,0	0/1:8,7:15:17.09:143,0,17	0/1:11,17:28:32.11:334,0,32	1/1:7,12:19:12.45:258,12,0	0/0:5,0:16:24.19:0,24,69	0/0:3,0:14:25.14:0,25,84	0/0:28,0:28:44.08:0,44,307	1/1:2,11:13:27.01:243,27,0	1/1:5,5:11:14.17:157,14,0	0/0:28,0:29:58.38:0,58,396	0/0:20,1:22:12.74:0,13,221	0/0:10,0:41:52.89:0,53,153	0/0:21,0:24:50.68:0,51,326	1/1:11,7:19:18.56:184,19,0	1/1:3,9:12:3.44:174,3,0	0/1:8,11:19:13.38:161,0,13	1/1:3,8:13:26.82:229,27,0	1/1:5,7:12:15.02:139,15,0	1/1:7,22:30:36.06:464,36,0	1/1:3,11:14:12.46:258,12,0	0/0:6,0:21:22.33:0,22,65	0/0:4,0:20:28.50:0,28,82	0/0:3,0:7:8.13:0,8,24
chr10	16371882	.	TA	T	7298.22	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=9.798;DP=685;FS=13.616;HRun=1;HaplotypeScore=88.8466;InbreedingCoeff=0.9994;MQ=85.25;MQ0=0;MQRankSum=-6.514;QD=40.10;ReadPosRankSum=3.583;VQSLOD=4.0625;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,135,2047	1/1:0,11:11:24.08:335,24,0	0/0:40,0:39:99:0,101,1633	0/0:22,0:21:51.09:0,51,774	1/1:0,28:28:84.24:1143,84,0	0/0:24,0:24:69.22:0,69,1078	0/0:29,0:29:87.20:0,87,1240	0/0:21,0:21:63.21:0,63,983	0/0:19,0:19:57.19:0,57,908	1/1:0,25:25:75.24:1030,75,0	1/1:0,11:11:33.11:458,33,0	0/0:25,0:25:75.24:0,75,1174	0/0:25,0:25:72.17:0,72,1075	0/0:16,0:16:48.15:0,48,740	0/0:27,0:27:81.25:0,81,1249	0/0:11,0:11:33.10:0,33,503	1/1:0,35:35:99:1425,102,0	0/0:20,0:20:60.17:0,60,932	0/0:21,0:21:63.21:0,63,981	0/0:23,0:23:69.24:0,69,1101	0/0:38,0:38:99:0,114,1710	0/0:24,0:24:72.22:0,72,1091	0/0:18,0:18:54.18:0,54,860	0/0:32,0:32:96.31:0,96,1507	0/0:23,0:23:69.24:0,69,1097	1/1:0,30:30:87.22:1150,87,0	1/1:0,33:33:99:1379,99,0	1/1:0,9:9:27.09:377,27,0
chr10	16373463	.	A	ATG	15328.85	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-10.973;DP=989;FS=0.000;HRun=0;HaplotypeScore=215.7583;InbreedingCoeff=0.9740;MQ=56.78;MQ0=3;MQRankSum=4.164;QD=34.06;ReadPosRankSum=1.945;VQSLOD=4.9012;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:39:95.54:0,96,1288	0/0:16,0:16:20.73:0,21,387	0/0:64,0:52:99:0,111,1337	0/0:54,0:43:68.77:0,69,873	0/0:33,0:33:52.51:0,53,614	1/1:4,13:17:36.12:602,36,0	1/1:6,20:26:51.17:853,51,0	1/1:18,33:52:99:1695,105,0	1/1:12,38:50:36.57:1489,37,0	0/0:60,0:60:99:0,129,1688	0/0:23,0:23:37.77:0,38,432	0/0:38,0:38:99:0,99,1232	1/1:3,38:42:99:1804,108,0	1/1:5,19:25:51.17:829,51,0	0/0:42,0:41:99:0,114,1422	0/0:34,0:34:87.23:0,87,1063	0/0:24,0:24:35.24:0,35,537	0/0:27,0:27:53.57:0,54,700	1/1:10,15:25:34.15:740,34,0	1/1:7,20:27:24.97:904,25,0	1/1:13,51:64:99:2202,135,0	1/1:4,23:27:48.16:788,48,0	1/1:2,18:20:51.17:853,51,0	1/1:5,36:39:86.32:1436,86,0	1/1:4,28:32:69.23:1135,69,0	0/0:42,0:42:93.46:0,93,1255	0/0:33,0:33:74.16:0,74,898	0/0:9,0:9:2.69:0,3,209
chr10	16373486	.	GGTA	G	317.02	PASS	AB=0.811;AC=4;AF=0.071;AN=56;BaseQRankSum=9.163;DP=917;FS=10.988;HRun=0;HaplotypeScore=300.0768;InbreedingCoeff=-0.0857;MQ=55.13;MQ0=4;MQRankSum=-9.194;QD=2.48;ReadPosRankSum=-1.393;VQSLOD=0.5787;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,106,2673	0/1:11,4:15:34.25:34,0,355	0/0:65,1:43:99:0,126,2792	0/0:54,0:40:83.10:0,83,2156	0/0:29,5:34:25.02:0,25,732	0/0:18,0:18:48.10:0,48,1092	0/0:21,0:21:54.17:0,54,1179	0/0:40,0:40:99:0,120,2717	0/0:36,0:36:96.32:0,96,2220	0/1:51,7:58:99:116,0,2919	0/0:24,2:26:6.18:0,6,537	0/0:29,0:29:87.30:0,87,2075	0/0:40,0:40:99:0,115,2661	0/0:26,0:26:72.72:0,73,1722	0/0:43,0:42:99:0,126,3038	0/0:32,0:32:85.97:0,86,2101	0/0:19,3:22:5.40:0,5,731	0/0:27,0:27:80.95:0,81,1893	0/0:19,0:19:45.60:0,46,968	0/0:24,0:24:63.20:0,63,1473	0/0:59,0:59:99:0,144,3395	0/0:26,0:26:75.20:0,75,1785	0/0:19,0:19:57.15:0,57,1282	0/0:39,0:39:98.90:0,99,2354	0/0:25,0:25:60.09:0,60,1366	0/1:35,9:44:99:220,0,1828	0/0:23,1:24:44.20:0,44,1128	0/1:7,4:11:55.78:56,0,268
chr10	16373521	.	GT	G	1110.89	PASS	AB=0.812;AC=7;AF=0.125;AN=56;BaseQRankSum=10.861;DP=863;FS=6.392;HRun=1;HaplotypeScore=260.6513;InbreedingCoeff=-0.1418;MQ=48.97;MQ0=39;MQRankSum=-10.168;QD=6.53;ReadPosRankSum=0.721;VQSLOD=0.3654;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:40:99:0,108,1562	0/1:13,1:15:65.62:66,0,151	0/0:50,0:15:42.12:0,42,598	0/0:45,1:17:45.04:0,45,636	0/1:11,8:23:28.13:86,0,28	0/0:25,0:24:56.92:0,57,778	0/0:28,0:28:31.27:0,31,742	0/0:32,0:30:87.05:0,87,1042	0/0:35,0:33:87.10:0,87,1032	0/1:20,16:37:99:565,0,390	0/1:18,11:29:78.58:79,0,129	0/0:25,0:25:72.22:0,72,1070	0/0:32,0:30:75.20:0,75,913	0/0:23,0:23:57.16:0,57,763	0/0:40,0:40:99:0,113,1717	0/0:37,0:36:99:0,99,1552	0/0:21,1:23:23.13:0,23,226	0/0:27,0:26:73.77:0,74,1116	0/0:21,0:17:39.11:0,39,473	0/0:18,0:17:33.10:0,33,431	0/0:64,0:61:99:0,122,1543	0/0:37,0:37:77.48:0,77,1019	0/0:28,0:26:52.89:0,53,731	0/0:38,0:38:84.25:0,84,1123	0/0:20,0:19:39.11:0,39,507	0/1:28,8:30:99:242,0,597	0/1:11,5:17:27.19:182,0,27	0/1:8,0:9:21.89:22,0,96
chr10	16373524	.	TGTGG	T	6179.86	PASS	AB=0.928;AC=31;AF=0.554;AN=56;BaseQRankSum=5.663;DP=859;FS=2.662;HRun=0;HaplotypeScore=275.1523;InbreedingCoeff=0.0706;MQ=48.61;MQ0=44;MQRankSum=-3.980;QD=9.64;ReadPosRankSum=-6.366;VQSLOD=2.9716;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:40:44.96:0,45,1033	1/1:16,2:17:35.70:350,36,0	0/0:45,0:12:19.90:0,20,179	0/1:42,0:14:7.32:7,0,149	1/1:22,3:25:20.02:162,20,0	0/1:22,3:24:98.45:184,0,98	0/1:26,1:27:99:109,0,185	1/1:29,0:26:71.51:534,72,0	0/1:31,2:31:99:310,0,128	1/1:40,1:40:99:784,100,0	1/1:26,5:30:30.72:325,31,0	0/0:23,0:23:32.63:0,33,649	0/1:23,8:28:99:266,0,163	0/1:22,1:23:83.40:83,0,205	0/0:39,0:39:75.23:0,75,1226	0/0:39,0:38:35.46:0,35,1380	1/1:25,4:26:40.28:434,40,0	0/0:28,0:27:60.68:0,61,1249	0/1:18,1:15:23.81:124,0,24	0/1:18,0:17:46.79:121,0,47	0/1:56,7:60:99:457,0,135	0/1:34,2:36:99:211,0,263	0/1:26,2:26:49.74:193,0,50	0/1:35,3:38:99:228,0,431	0/1:18,3:19:58.51:143,0,59	1/1:35,1:30:79.75:587,80,0	1/1:14,4:17:33.94:342,34,0	1/1:3,6:9:17.91:226,18,0
chr10	16377818	.	TA	T	1967.18	PASS	AB=0.639;AC=37;AF=0.661;AN=56;BaseQRankSum=1.553;DP=556;FS=0.456;HRun=14;HaplotypeScore=82.2755;InbreedingCoeff=0.5571;MQ=66.02;MQ0=1;MQRankSum=2.305;QD=5.11;ReadPosRankSum=6.258;VQSLOD=2.1114;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,3:50:52.27:0,52,607	1/1:1,0:5:2:8,2,0	0/0:19,0:13:14:0,14,77	0/0:20,0:14:1.02:0,1,91	1/1:4,2:18:20.60:86,21,0	1/1:5,14:21:33.35:216,33,0	0/1:7,15:22:13.25:169,0,13	1/1:6,15:21:18.92:224,19,0	1/1:16,4:20:22.28:154,22,0	1/1:8,0:29:15.10:87,15,0	1/1:9,0:17:2.37:12,2,0	0/0:24,0:24:50.30:0,50,402	1/1:11,6:16:17.64:123,18,0	1/1:9,11:20:23.64:164,24,0	0/0:22,0:22:13.22:0,13,216	0/0:16,3:20:12.66:0,13,227	1/1:7,0:28:32.57:95,33,0	0/0:15,0:15:24.01:0,24,227	1/1:7,9:16:22.14:133,22,0	0/1:14,5:19:1.39:67,0,1	1/1:12,14:27:15.80:107,16,0	0/1:3,5:9:0.40:88,0,0	0/1:7,8:17:22.39:91,0,22	0/1:5,11:18:14.23:69,0,14	1/1:4,5:10:13.76:82,14,0	1/1:6,0:15:16.58:49,17,0	1/1:5,0:23:19.72:61,20,0	1/1:2,0:13:19.77:70,20,0
chr10	16378179	.	CTCTG	C	1806.05	PASS	AB=0.675;AC=12;AF=0.222;AN=54;BaseQRankSum=10.303;DP=629;FS=0.000;HRun=0;HaplotypeScore=131.0518;InbreedingCoeff=0.7857;MQ=56.35;MQ0=5;MQRankSum=-9.002;QD=14.45;ReadPosRankSum=1.173;VQSLOD=3.2019;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:90.31:0,90,2123	./.	0/0:23,0:13:6.02:0,6,113	0/0:45,0:27:30.65:0,31,705	1/1:9,12:21:5.25:80,5,0	0/0:13,0:13:12.04:0,12,292	0/0:30,0:30:72.23:0,72,1622	0/0:20,0:20:36.12:0,36,788	0/0:19,0:19:39.13:0,39,939	1/1:15,9:24:22.77:395,23,0	0/1:12,6:18:0:0,0,0	0/0:28,0:28:36.12:0,36,814	0/0:25,0:25:51.17:0,51,1154	0/0:19,0:19:36.12:0,36,865	0/0:23,0:23:42.14:0,42,1017	0/0:19,0:19:42.14:0,42,1019	1/1:11,9:20:23.82:385,24,0	0/0:12,0:12:30.10:0,30,726	0/0:15,0:15:15.02:0,15,313	0/0:19,0:19:42.13:0,42,902	0/0:36,0:36:81.27:0,81,1842	0/0:14,0:14:27.08:0,27,603	0/0:20,0:20:36.11:0,36,791	0/0:50,0:50:87.26:0,87,2018	0/0:24,0:24:36.09:0,36,870	0/1:8,16:24:12.84:810,0,13	1/1:3,5:8:12.04:162,12,0	1/1:5,5:10:9.03:138,9,0
chr10	16378208	.	ATTCTCTCT	A	3585.70	PASS	AB=0.615;AC=10;AF=0.185;AN=54;BaseQRankSum=10.640;DP=685;FS=3.061;HRun=0;HaplotypeScore=165.7121;InbreedingCoeff=0.7369;MQ=50.92;MQ0=40;MQRankSum=-9.753;QD=31.18;ReadPosRankSum=0.747;VQSLOD=3.0859;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:42:99:0,103,2814	./.	0/0:60,0:7:3.98:0,4,161	0/0:77,0:28:54.12:0,54,626	0/1:6,15:21:1.10:5,0,1	0/0:10,0:10:20.24:0,20,481	0/0:29,0:29:76.27:0,76,1417	0/0:24,0:23:69.17:0,69,1724	0/0:17,0:17:39.10:0,39,1080	1/1:4,11:15:41.85:805,42,0	0/0:1,11:14:0.94:0,1,3	0/0:29,0:27:36.16:0,36,633	0/0:17,0:17:49.70:0,50,1520	0/0:20,0:20:42.02:0,42,1156	0/0:24,0:24:57.12:0,57,1560	0/0:19,0:19:53.38:0,53,1668	1/1:5,24:29:29.96:525,30,0	0/0:13,0:13:39.13:0,39,1209	0/0:12,0:11:33:0,33,790	0/0:18,0:18:42.05:0,42,1029	0/0:38,0:36:84.47:0,84,2040	0/0:14,0:14:30.77:0,31,907	0/0:16,0:16:33.94:0,34,879	0/0:56,0:54:97.10:0,97,2597	0/0:16,0:16:35.95:0,36,765	0/1:13,13:28:48.35:1422,0,48	1/1:2,9:12:8.04:600,8,0	1/1:4,3:6:12.03:229,12,0
chr10	16378209	.	T	TTC	42.08	PASS	AB=0.911;AC=4;AF=0.074;AN=54;BaseQRankSum=0.531;DP=696;FS=1.206;HRun=0;HaplotypeScore=135.4405;InbreedingCoeff=0.1695;MQ=50.82;MQ0=41;MQRankSum=-0.114;QD=0.51;ReadPosRankSum=-4.515;VQSLOD=0.4636;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:43:23.06:0,23,405	./.	0/0:60,0:7:2.87:0,3,21	0/0:77,0:28:2.12:0,2,40	0/1:22,0:21:0.19:0,0,0	0/0:10,0:10:8.15:0,8,68	0/0:30,0:30:29.13:0,29,226	0/0:25,0:24:22.14:0,22,201	0/0:17,0:17:23.94:0,24,191	0/0:17,0:15:19.42:0,19,97	0/1:14,0:14:0:0,0,0	0/1:14,16:29:31.72:115,0,32	0/0:17,0:17:26.38:0,26,237	0/0:20,0:20:15.75:0,16,186	0/0:20,0:24:29.86:0,30,274	0/0:19,0:19:32.95:0,33,279	0/0:29,0:29:13.11:0,13,57	0/0:14,0:14:20.92:0,21,186	0/0:12,0:11:6.46:0,6,51	0/0:19,0:19:8:0,8,134	0/0:37,0:35:38.64:0,39,297	0/1:15,0:15:3.75:4,0,71	0/0:16,0:16:13.96:0,14,99	0/0:57,0:55:36.84:0,37,410	0/0:16,0:16:11.73:0,12,85	0/0:30,0:30:17.27:0,17,197	0/0:12,0:12:18.85:0,19,95	0/0:7,0:6:5.68:0,6,23
chr10	16378234	.	TCA	T	1231.70	PASS	AB=0.954;AC=28;AF=0.538;AN=52;BaseQRankSum=-0.851;DP=702;FS=17.732;HRun=0;HaplotypeScore=124.8579;InbreedingCoeff=0.3687;MQ=46.24;MQ0=32;MQRankSum=2.579;QD=2.79;ReadPosRankSum=-1.531;VQSLOD=1.1215;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:46:4.82:0,5,292	0/0:5,0:5:5.93:0,6,41	./.	./.	0/0:19,0:19:5.84:0,6,39	1/1:16,0:15:8.74:55,9,0	1/1:29,0:29:11.87:146,12,0	0/1:20,0:17:0.50:33,0,0	1/1:11,7:18:3.48:34,3,0	0/0:22,0:20:8.71:0,9,179	0/0:13,0:12:2.98:0,3,21	0/1:27,0:24:12.34:12,0,89	1/1:32,0:32:52.78:387,53,0	1/1:12,14:26:6.01:66,6,0	0/0:23,0:22:22.82:0,23,336	0/1:29,0:29:22.79:23,0,263	0/1:28,0:28:6.96:7,0,71	0/0:18,0:17:23.46:0,23,234	1/1:12,0:12:9.94:56,10,0	1/1:11,8:19:5.71:51,6,0	1/1:44,0:42:31.23:219,31,0	1/1:25,1:26:23.75:188,24,0	1/1:19,0:19:2.79:32,3,0	0/1:37,22:58:27.53:65,0,28	1/1:9,7:16:2.90:16,3,0	0/0:28,1:29:9.74:0,10,189	0/1:20,0:20:15.87:16,0,134	0/0:12,0:11:22.41:0,22,158
chr10	16380783	.	G	GC	4285.81	PASS	AC=14;AF=0.259;AN=54;BaseQRankSum=7.142;DP=604;FS=0.000;HRun=6;HaplotypeScore=66.4138;InbreedingCoeff=0.9961;MQ=80.78;MQ0=0;MQRankSum=-1.502;QD=31.28;ReadPosRankSum=2.014;VQSLOD=5.2748;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,105,1070	1/1:0,12:12:30.09:377,30,0	0/0:22,0:22:55.73:0,56,534	0/0:18,0:18:14.23:0,14,213	1/1:0,20:20:56.81:664,57,0	0/0:19,0:19:51.11:0,51,520	0/0:30,0:30:84.17:0,84,850	0/0:32,0:32:75.12:0,75,755	0/0:13,0:13:30.06:0,30,306	1/1:3,15:18:45.14:566,45,0	1/1:2,11:13:30.10:377,30,0	0/0:20,0:20:60.12:0,60,605	0/0:12,0:12:36.06:0,36,360	0/0:17,0:17:42.09:0,42,429	0/0:22,0:22:60.12:0,60,605	0/0:28,0:28:78.16:0,78,789	1/1:4,31:35:90.29:1132,90,0	0/0:22,0:22:60.11:0,60,604	0/0:16,0:16:45.07:0,45,449	0/0:19,0:19:51.11:0,51,520	0/0:47,0:47:99:0,135,1369	0/0:23,0:23:69.15:0,69,702	0/0:13,0:13:33.08:0,33,337	0/0:28,0:28:69.15:0,69,704	0/0:22,0:22:57.12:0,57,576	1/1:3,12:15:36.12:453,36,0	1/1:3,21:24:57.18:716,57,0	./.
chr10	16382497	.	T	TAGA	7307.72	PASS	AB=0.556;AC=25;AF=0.463;AN=54;BaseQRankSum=-10.055;DP=433;FS=5.516;HRun=0;HaplotypeScore=79.3363;InbreedingCoeff=0.8895;MQ=49.95;MQ0=12;MQRankSum=-2.999;QD=38.67;ReadPosRankSum=-2.321;VQSLOD=4.7719;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:51.14:0,51,798	0/0:7,0:6:18.03:0,18,259	0/0:6,0:3:6.02:0,6,91	./.	0/0:13,0:13:33.10:0,33,524	1/1:3,11:13:15.05:339,15,0	1/1:2,6:8:12.04:272,12,0	1/1:12,11:23:51.14:1027,51,0	1/1:3,11:14:33.11:682,33,0	0/0:15,0:15:45.15:0,45,747	0/0:13,0:13:33.11:0,33,545	0/0:10,0:9:24.07:0,24,375	1/1:2,9:12:21.07:464,21,0	1/1:1,11:12:21.07:475,21,0	0/0:15,0:14:36.12:0,36,598	0/0:8,0:8:18.06:0,18,294	0/0:25,0:25:66.18:0,66,1065	0/0:25,0:25:60.20:0,60,999	1/1:11,16:22:51.14:1070,51,0	1/1:1,9:10:20.99:380,21,0	1/1:4,13:14:18.06:408,18,0	1/1:1,12:13:24.08:542,24,0	1/1:2,10:12:24.08:543,24,0	0/1:4,16:20:49:902,0,49	1/1:0,7:7:9.03:204,9,0	0/0:21,0:21:57.19:0,57,949	0/0:31,0:31:78.24:0,78,1245	0/0:11,0:11:33.09:0,33,494
chr10	16382994	.	C	CA	8845.74	PASS	AC=52;AF=0.963;AN=54;BaseQRankSum=6.728;DP=281;FS=0.000;HRun=1;HaplotypeScore=306.3342;InbreedingCoeff=0.3410;MQ=32.61;MQ0=0;MQRankSum=0.835;QD=31.59;ReadPosRankSum=6.589;VQSLOD=3.4116;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,10:14:25.07:372,25,0	1/1:0,1:1:3.01:42,3,0	0/0:1,0:1:0:0,0,0	./.	1/1:7,15:22:41.07:537,41,0	1/1:1,8:9:24.08:331,24,0	1/1:1,9:10:26:347,26,0	1/1:5,11:16:31.43:463,31,0	1/1:2,10:12:28.42:415,28,0	1/1:3,8:11:27.09:387,27,0	1/1:4,10:14:28.39:403,28,0	1/1:1,11:12:31.43:455,31,0	1/1:1,5:6:17.99:213,18,0	1/1:1,9:10:26.04:374,26,0	1/1:3,9:12:24.98:370,25,0	1/1:1,11:11:25.41:372,25,0	1/1:1,12:13:31.40:449,31,0	1/1:1,4:5:12.04:170,12,0	1/1:0,4:4:12.04:173,12,0	1/1:3,11:14:29.29:444,29,0	1/1:2,6:8:16.35:247,16,0	1/1:3,6:9:15.30:242,15,0	1/1:4,16:20:44.10:621,44,0	1/1:2,8:10:10.33:152,10,0	1/1:2,7:9:18.96:287,19,0	1/1:2,11:13:35.67:508,36,0	1/1:2,10:12:26.82:410,27,0	1/1:1,1:2:5.98:62,6,0
chr10	16383015	.	A	AC	10930.79	PASS	AC=52;AF=0.963;AN=54;BaseQRankSum=1.569;DP=265;FS=0.000;HRun=0;HaplotypeScore=325.8975;InbreedingCoeff=0.6027;MQ=32.72;MQ0=0;MQRankSum=-1.732;QD=41.40;ReadPosRankSum=0.587;VQSLOD=3.0997;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,9:10:24.08:370,24,0	1/1:0,4:4:12.04:191,12,0	0/0:1,0:1:3:0,3,25	./.	1/1:0,12:12:30.10:476,30,0	1/1:0,13:13:36.08:545,36,0	1/1:0,7:7:14.95:239,15,0	1/1:1,13:14:30.10:479,30,0	1/1:0,13:13:38.16:576,38,0	1/1:1,12:13:39.13:622,39,0	1/1:0,11:11:33.11:524,33,0	1/1:1,12:13:36.12:561,36,0	1/1:1,7:8:18.06:286,18,0	1/1:2,9:11:33.11:523,33,0	1/1:0,9:9:27.09:429,27,0	1/1:1,14:14:36.12:569,36,0	1/1:0,11:11:27.09:427,27,0	1/1:0,3:3:9.03:143,9,0	1/1:1,8:9:27.09:421,27,0	1/1:1,9:10:27.09:429,27,0	1/1:0,6:6:12.04:178,12,0	1/1:0,6:6:18.06:286,18,0	1/1:0,20:20:54.18:858,54,0	1/1:0,9:9:12.01:191,12,0	1/1:0,8:8:21.07:326,21,0	1/1:0,15:15:45.15:717,45,0	1/1:2,9:11:27.09:429,27,0	1/1:1,2:3:9.03:135,9,0
chr10	16383030	.	A	AG	4801.98	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=1.768;DP=260;FS=18.921;HRun=0;HaplotypeScore=346.1254;InbreedingCoeff=0.6150;MQ=39.50;MQ0=0;MQRankSum=-2.961;QD=18.68;ReadPosRankSum=0.918;VQSLOD=1.5318;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,9:10:26.15:162,26,0	1/1:1,4:5:11.58:74,12,0	0/0:1,0:1:2.99:0,3,23	0/0:2,0:2:2.90:0,3,16	1/1:1,10:11:22.34:131,22,0	1/1:0,13:13:38.11:244,38,0	1/1:0,4:4:11.78:88,12,0	1/1:2,10:12:29.92:298,30,0	1/1:0,16:16:44.11:320,44,0	1/1:2,13:15:44.71:369,45,0	1/1:1,9:10:25.39:131,25,0	1/1:1,13:14:38.18:264,38,0	1/1:0,11:11:29.43:233,29,0	1/1:1,10:11:22.79:136,23,0	1/1:0,7:7:20.36:116,20,0	1/1:1,14:14:38.44:297,38,0	1/1:0,5:5:11.68:75,12,0	1/1:0,3:3:8.77:51,9,0	1/1:1,7:8:23.89:196,24,0	1/1:0,11:11:32.35:240,32,0	1/1:0,2:2:2.84:14,3,0	1/1:0,9:9:26.47:221,26,0	1/1:1,18:19:52.64:369,53,0	1/1:0,9:9:11.36:57,11,0	1/1:1,8:9:23.34:136,23,0	1/1:1,13:14:41.61:304,42,0	1/1:1,8:9:23.45:187,23,0	1/1:1,4:5:11.66:88,12,0
chr10	16383065	.	C	CA	5929.26	PASS	AC=50;AF=0.926;AN=54;BaseQRankSum=5.633;DP=227;FS=105.539;HRun=3;HaplotypeScore=305.3377;InbreedingCoeff=0.6409;MQ=72.93;MQ0=0;MQRankSum=-6.197;QD=28.10;ReadPosRankSum=4.034;VQSLOD=-0.1528;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,4:4:9.03:103,9,0	1/1:1,4:5:12.04:141,12,0	0/0:4,0:4:11.89:0,12,100	0/0:12,0:12:7.11:0,7,230	1/1:4,5:9:15.04:172,15,0	1/1:2,9:11:27.08:315,27,0	1/1:0,5:5:15.04:172,15,0	1/1:4,2:6:8.99:92,9,0	1/1:3,9:12:27.08:321,27,0	1/1:3,13:16:41.33:464,41,0	1/1:3,8:11:24.07:292,24,0	1/1:1,6:7:18.05:206,18,0	1/1:1,10:11:29.83:336,30,0	1/1:0,7:7:21.06:247,21,0	1/1:1,3:4:9.03:104,9,0	1/1:2,8:10:24.07:280,24,0	1/1:0,2:2:6.02:69,6,0	1/1:0,1:1:3.01:37,3,0	1/1:0,1:1:3.01:36,3,0	1/1:1,9:10:27.08:318,27,0	./.	1/1:3,11:14:38.44:411,38,0	1/1:3,15:18:45.09:510,45,0	1/1:1,3:4:9.03:104,9,0	1/1:5,7:12:23.28:251,23,0	1/1:2,11:13:30.09:352,30,0	1/1:3,7:10:29.92:306,30,0	1/1:0,8:8:24.07:287,24,0
chr10	16383069	.	G	GC	5861.50	PASS	AC=50;AF=0.926;AN=54;BaseQRankSum=4.553;DP=202;FS=106.373;HRun=1;HaplotypeScore=263.7274;InbreedingCoeff=0.6892;MQ=76.64;MQ0=0;MQRankSum=-5.965;QD=31.51;ReadPosRankSum=3.461;VQSLOD=-0.3812;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,4:4:9.02:101,9,0	1/1:1,4:5:15.01:156,15,0	0/0:4,0:4:12:0,12,111	0/0:12,0:12:25.79:0,26,230	1/1:2,6:8:16.29:200,16,0	1/1:0,9:9:27.08:305,27,0	1/1:0,5:5:15.04:170,15,0	1/1:0,3:3:9.03:113,9,0	1/1:1,9:10:26.11:277,26,0	1/1:0,14:14:42.12:497,42,0	1/1:0,9:9:25.46:233,25,0	1/1:0,6:6:18.05:201,18,0	1/1:0,11:11:29.30:314,29,0	1/1:0,7:7:20.27:204,20,0	1/1:0,3:3:9.03:101,9,0	1/1:0,8:8:24.07:270,24,0	1/1:0,2:2:6.02:67,6,0	1/1:0,1:1:3.01:37,3,0	1/1:0,1:1:3.01:35,3,0	1/1:1,9:10:26.19:276,26,0	./.	1/1:0,13:13:39.11:451,39,0	1/1:0,16:16:44.34:477,44,0	1/1:0,3:3:9.02:100,9,0	1/1:1,8:9:25.62:283,26,0	1/1:0,11:11:30.09:352,30,0	1/1:0,10:10:30.09:362,30,0	1/1:0,8:8:24.07:277,24,0
chr10	16383875	.	T	TG	1394.19	PASS	AB=0.900;AC=37;AF=0.925;AN=40;BaseQRankSum=-2.176;DP=362;FS=2.884;HRun=4;HaplotypeScore=60.1355;InbreedingCoeff=0.0129;MQ=74.88;MQ0=0;MQRankSum=-2.065;QD=4.94;ReadPosRankSum=-2.231;VQSLOD=-0.6001;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:18,4:22:13.24:141,13,0	./.	1/1:5,11:16:11.40:128,11,0	0/1:8,1:9:0.84:74,0,1	./.	1/1:11,2:13:6.02:82,6,0	./.	1/1:12,4:16:12.04:158,12,0	1/1:16,1:17:3.01:40,3,0	1/1:6,3:9:9.03:120,9,0	1/1:4,4:8:5.98:77,6,0	1/1:15,5:20:9.03:119,9,0	1/1:18,1:19:3.01:40,3,0	1/1:21,0:21:2.97:20,3,0	1/1:22,3:25:6.02:82,6,0	1/1:15,1:16:5.98:60,6,0	1/1:3,2:5:5.98:61,6,0	./.	1/1:9,1:10:3.01:41,3,0	1/1:12,2:14:5.98:60,6,0	1/1:16,0:16:12:126,12,0	1/1:8,2:10:2.97:20,3,0	0/0:10,0:10:0.47:0,0,1	./.	1/1:16,0:16:2.97:20,3,0	./.	./.	./.
chr10	16392145	.	CTG	C	5505.09	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=9.051;DP=880;FS=0.000;HRun=0;HaplotypeScore=120.9559;InbreedingCoeff=0.9974;MQ=74.01;MQ0=2;MQRankSum=-2.909;QD=27.80;ReadPosRankSum=4.041;VQSLOD=6.1925;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,1:50:99:0,120,1899	1/1:2,11:13:27.08:335,27,0	0/0:38,0:35:67.04:0,67,944	0/0:50,0:46:99:0,110,1532	1/1:10,14:24:25.14:467,25,0	0/0:27,0:27:63.22:0,63,1027	0/0:21,1:22:16.95:0,17,765	0/0:25,0:25:51.16:0,51,803	0/0:37,0:37:90.31:0,90,1468	1/1:4,38:42:99:1305,111,0	1/1:2,19:21:51.16:632,51,0	0/0:32,1:33:44.08:0,44,1225	0/0:32,0:32:93.30:0,93,1481	0/0:36,0:36:99:0,99,1612	0/0:40,1:41:68.16:0,68,1631	0/0:34,0:34:84.25:0,84,1345	1/1:5,21:26:48.15:595,48,0	0/0:26,0:26:63.22:0,63,1033	0/0:18,0:18:45.61:0,46,692	0/0:24,0:24:57.19:0,57,935	0/0:50,0:50:99:0,126,2042	0/0:34,0:34:84.26:0,84,1308	0/0:27,0:27:71.73:0,72,1129	0/0:51,0:51:99:0,126,2062	0/0:26,1:27:32.01:0,32,1015	1/1:4,25:29:75.24:929,75,0	1/1:4,24:29:78.08:944,78,0	1/1:2,11:13:24.08:298,24,0
chr10	16392859	.	G	GC	3636.33	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-9.310;DP=465;FS=0.000;HRun=7;HaplotypeScore=50.6417;InbreedingCoeff=0.9908;MQ=66.02;MQ0=3;MQRankSum=1.013;QD=26.74;ReadPosRankSum=1.112;VQSLOD=4.0661;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:72.11:0,72,695	1/1:0,9:9:21.06:251,21,0	0/0:26,0:13:29.27:0,29,257	0/0:20,0:13:20.91:0,21,191	1/1:5,17:22:42.13:507,42,0	0/0:10,0:10:24.03:0,24,232	0/0:13,0:13:33.05:0,33,318	0/0:18,0:18:35.91:0,36,347	0/0:20,0:20:45.06:0,45,435	1/1:2,13:15:36.10:421,36,0	1/1:2,9:11:14.72:175,15,0	0/0:12,0:12:33.05:0,33,319	0/0:20,0:20:54.08:0,54,521	0/0:11,0:11:30.01:0,30,281	0/0:13,0:13:30.05:0,30,290	0/0:18,0:18:48.08:0,48,463	1/1:1,29:30:78.24:943,78,0	0/0:16,0:16:39.06:0,39,377	0/0:13,0:13:30.04:0,30,290	0/0:18,0:18:51.08:0,51,492	0/0:20,0:20:60.07:0,60,571	0/0:16,0:16:45.07:0,45,434	0/0:16,0:16:45.02:0,45,423	0/0:7,0:7:15.02:0,15,145	0/0:15,0:15:30.04:0,30,290	1/1:5,17:22:48.09:541,48,0	1/1:2,18:20:48.15:580,48,0	1/1:1,6:7:18.06:217,18,0
chr10	16397012	.	A	ATTGTTGCATCTTCTGTGAAGA	36213.38	PASS	AB=0.843;AC=51;AF=0.944;AN=54;BaseQRankSum=-3.714;DP=264;FS=15.137;HRun=0;HaplotypeScore=310.8869;InbreedingCoeff=-0.0828;MQ=59.02;MQ0=0;MQRankSum=-1.800;QD=137.17;ReadPosRankSum=1.981;VQSLOD=3.1080;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:21:42.13:2423,42,0	1/1:3,0:3:9.03:688,9,0	0/1:5,1:3:25.42:810,0,25	0/1:6,0:6:11.50:761,0,11	1/1:7,0:7:18.53:838,19,0	1/1:9,0:9:27.09:2017,27,0	1/1:13,0:13:36.12:2123,36,0	1/1:6,0:6:12.04:505,12,0	1/1:19,0:19:57.20:3113,57,0	1/1:4,0:4:8.75:499,9,0	1/1:7,0:7:4.08:317,4,0	1/1:17,0:17:44.36:3045,44,0	1/1:7,0:7:1.49:950,1,0	1/1:13,0:13:24.18:2077,24,0	1/1:13,0:13:26.26:1597,26,0	1/1:11,0:11:7.72:1560,8,0	1/1:6,0:6:15.05:983,15,0	1/1:3,0:3:3.01:265,3,0	1/1:7,0:7:21.07:1203,21,0	0/1:7,0:7:1.63:704,0,2	1/1:15,0:15:26.76:1328,27,0	1/1:6,0:6:12.04:881,12,0	1/1:12,0:12:31.72:1291,32,0	1/1:12,0:12:28.34:1447,28,0	1/1:11,0:11:20.43:1073,20,0	1/1:12,0:12:26.60:2365,27,0	1/1:7,0:6:20.94:1350,21,0	./.
chr10	16397821	.	T	TTAAG	25835.62	PASS	AB=0.941;AC=43;AF=0.768;AN=56;BaseQRankSum=-11.809;DP=651;FS=0.353;HRun=0;HaplotypeScore=98.8393;InbreedingCoeff=0.8968;MQ=73.37;MQ0=0;MQRankSum=-5.908;QD=51.88;ReadPosRankSum=1.914;VQSLOD=5.5998;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,123,2189	1/1:2,7:11:24.08:586,24,0	0/0:20,0:20:43.91:0,44,702	0/0:18,0:18:26.68:0,27,544	1/1:7,16:23:48.16:1101,48,0	1/1:1,16:18:45.15:1092,45,0	1/1:6,28:34:69.24:1763,69,0	1/1:7,22:30:78.25:1777,78,0	1/1:4,18:23:51.17:1284,51,0	1/1:5,26:33:87.24:2041,87,0	1/1:4,5:9:18.06:359,18,0	0/0:27,0:27:75.26:0,75,1356	1/1:1,16:18:39.13:976,39,0	1/1:5,22:30:66.22:1620,66,0	0/0:26,0:26:75.23:0,75,1266	0/0:17,0:17:48.14:0,48,816	1/1:2,23:25:63.22:1650,63,0	0/1:15,1:16:33.46:33,0,695	1/1:6,13:19:45.14:1083,45,0	1/1:6,17:24:51.17:1255,51,0	1/1:7,23:31:51.17:1292,51,0	1/1:4,21:25:45.07:1070,45,0	1/1:2,13:16:27.05:527,27,0	1/1:5,19:25:45.15:1171,45,0	1/1:0,15:15:33.11:863,33,0	1/1:5,23:28:69.24:1803,69,0	1/1:6,29:34:75.26:1940,75,0	1/1:1,7:8:21.07:550,21,0
chr10	16398790	.	A	AAC	8106.34	PASS	AB=0.677;AC=23;AF=0.411;AN=56;BaseQRankSum=-11.008;DP=944;FS=0.343;HRun=0;HaplotypeScore=128.2372;InbreedingCoeff=0.6307;MQ=64.39;MQ0=16;MQRankSum=0.405;QD=15.65;ReadPosRankSum=-1.416;VQSLOD=4.6040;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:50:98.86:0,99,1039	0/0:12,0:13:23.90:0,24,255	0/0:36,0:20:5.73:0,6,36	0/1:51,0:25:13.99:14,0,46	0/0:23,1:28:1.48:0,1,442	1/1:10,11:21:27.09:418,27,0	1/1:13,29:42:9.36:877,9,0	1/1:26,18:45:54.97:735,55,0	1/1:11,20:31:39.13:604,39,0	0/0:38,0:39:66:0,66,721	0/0:20,0:19:36.09:0,36,404	0/0:34,0:36:89.71:0,90,943	1/1:10,16:25:9.96:483,10,0	0/1:11,30:43:10.56:773,0,11	0/0:52,0:53:99:0,106,1134	0/0:38,0:38:74.98:0,75,816	0/0:21,0:21:24.29:0,24,430	0/0:28,0:28:23.50:0,23,606	1/1:10,7:16:25.49:359,25,0	1/1:12,16:29:33.11:511,33,0	0/1:23,45:71:39.57:960,0,40	1/1:17,3:46:48.02:481,48,0	0/1:11,17:28:1.36:431,0,1	1/1:13,27:40:46.60:987,47,0	0/1:7,19:26:5.28:472,0,5	0/0:33,0:33:57.13:0,57,628	0/0:17,0:17:45.13:0,45,517	0/0:13,0:13:27.06:0,27,298
chr10	16398986	.	G	GACAC	10190.70	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-11.428;DP=919;FS=1.075;HRun=0;HaplotypeScore=163.4943;InbreedingCoeff=0.9923;MQ=61.47;MQ0=4;MQRankSum=-0.803;QD=46.32;ReadPosRankSum=0.056;VQSLOD=5.4307;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,102,1676	1/1:1,7:10:17.70:447,18,0	0/0:47,0:31:51.16:0,51,786	0/0:52,0:36:62.51:0,63,882	1/1:3,27:35:56.55:1286,57,0	0/0:19,0:19:45.58:0,46,681	0/0:31,0:31:66.21:0,66,1077	0/0:35,0:36:72.23:0,72,1168	0/0:36,0:36:99:0,99,1658	1/1:5,35:49:99:2595,101,0	1/1:4,23:29:56.35:1355,56,0	0/0:30,0:32:59.78:0,60,1032	0/0:34,0:35:93.27:0,93,1474	0/0:35,0:35:69.24:0,69,1164	0/0:32,0:33:12.42:0,12,1100	0/0:34,0:34:93.32:0,93,1567	1/1:3,18:21:36.12:895,36,0	0/0:26,0:26:51.17:0,51,857	0/0:24,0:26:60.13:0,60,838	0/0:24,0:25:57.16:0,57,883	0/0:58,0:57:99:0,117,1863	0/0:37,0:37:99:0,99,1610	0/0:34,0:35:93.26:0,93,1484	0/0:28,0:29:78.23:0,78,1228	0/0:24,0:26:63.15:0,63,1031	1/1:8,22:34:74.73:1572,75,0	1/1:3,29:35:68.97:1654,69,0	1/1:0,6:7:17.80:386,18,0
chr10	16401241	.	GA	G	5959.50	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=13.873;DP=756;FS=0.000;HRun=4;HaplotypeScore=73.0634;InbreedingCoeff=0.9986;MQ=79.24;MQ0=0;MQRankSum=-1.805;QD=31.53;ReadPosRankSum=1.707;VQSLOD=5.2819;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:53:99:0,157,2158	1/1:0,15:15:45.14:540,45,0	0/0:18,0:18:45.12:0,45,558	0/0:23,0:22:64.93:0,65,813	1/1:2,34:36:99:1188,99,0	0/0:19,0:19:57.18:0,57,783	0/0:43,0:43:99:0,123,1681	0/0:38,0:38:99:0,111,1510	0/0:22,0:22:66.22:0,66,922	1/1:3,24:27:72.19:849,72,0	1/1:0,13:13:30.09:360,30,0	0/0:34,0:34:99:0,102,1397	0/0:37,0:37:99:0,105,1455	0/0:33,0:33:99:0,99,1386	0/0:24,0:24:69.22:0,69,948	0/0:29,0:29:84.28:0,84,1176	1/1:5,31:36:90.27:1080,90,0	0/0:26,0:26:75.25:0,75,1049	0/0:20,0:20:60.19:0,60,825	0/0:23,0:23:66.22:0,66,924	0/0:35,0:35:93.29:0,93,1266	0/0:20,0:20:57.19:0,57,798	0/0:27,0:27:66.22:0,66,924	0/0:22,0:22:63.20:0,63,867	0/0:20,0:20:57.18:0,57,782	1/1:0,29:29:87.27:1043,87,0	1/1:2,23:25:57.17:684,57,0	1/1:0,8:8:18.06:216,18,0
chr10	16401772	.	CG	C	9339.92	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=8.959;DP=583;FS=0.000;HRun=3;HaplotypeScore=76.5015;InbreedingCoeff=0.9974;MQ=99.56;MQ0=0;MQRankSum=-2.975;QD=32.77;ReadPosRankSum=2.639;VQSLOD=5.2700;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:38:99:0,111,1559	0/0:7,0:7:21.04:0,21,280	0/0:36,0:36:99:0,99,1347	0/0:35,0:35:65.37:0,65,1228	0/0:14,0:14:39.13:0,39,561	1/1:1,19:20:51.16:632,51,0	1/1:0,18:18:51.16:632,51,0	1/1:2,26:28:78.23:954,78,0	1/1:0,15:15:45.13:546,45,0	0/0:22,0:22:60.20:0,60,849	0/0:9,0:9:18.06:0,18,258	0/0:20,0:20:60.19:0,60,845	1/1:0,20:20:57.18:706,57,0	1/1:1,26:27:66.21:817,66,0	0/0:24,0:24:69.18:0,69,917	0/0:9,0:9:24.08:0,24,345	0/0:26,0:26:51.17:0,51,733	0/0:17,0:17:51.15:0,51,710	1/1:1,18:19:45.14:557,45,0	1/1:2,12:14:36.08:430,36,0	1/1:0,35:35:93.29:1152,93,0	1/1:1,19:20:57.14:689,57,0	1/1:1,12:13:36.11:446,36,0	1/1:2,34:36:89.22:1111,89,0	1/1:1,19:20:54.17:669,54,0	0/0:19,0:19:42.13:0,42,588	0/0:14,0:14:36.12:0,36,517	0/0:7,0:7:21.07:0,21,298
chr10	16401804	.	TCA	T	2101.25	PASS	AB=0.855;AC=21;AF=0.404;AN=52;BaseQRankSum=5.090;DP=630;FS=13.578;HRun=0;HaplotypeScore=120.3612;InbreedingCoeff=0.1452;MQ=72.59;MQ0=7;MQRankSum=2.435;QD=5.99;ReadPosRankSum=2.275;VQSLOD=2.4666;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:38:53.97:0,54,744	0/0:10,0:10:6:0,6,61	./.	./.	0/0:16,0:16:6.02:0,6,84	0/1:15,3:18:71.74:83,0,72	1/1:19,9:31:5.69:424,6,0	1/1:17,0:17:5.16:63,5,0	1/1:14,7:22:35.93:375,36,0	0/0:26,0:34:58.12:0,58,550	0/0:9,0:9:5.52:0,6,47	0/1:18,4:22:89.67:90,0,378	0/1:11,5:17:53.73:155,0,54	1/1:22,3:25:14.87:144,15,0	0/1:22,0:22:2.85:3,0,346	0/1:12,4:16:38.83:39,0,265	0/0:19,0:33:6.44:0,6,48	0/0:22,0:22:41.24:0,41,481	1/1:14,0:14:2.97:20,3,0	0/0:8,1:9:0:0,0,0	0/1:42,6:48:66.13:290,0,66	0/1:16,2:18:23.98:149,0,24	1/1:18,1:18:11.99:114,12,0	0/1:25,9:36:15.41:239,0,15	0/1:21,2:23:80.67:81,0,116	0/0:26,0:26:49.64:0,50,387	0/0:13,0:13:11.99:0,12,116	0/0:4,0:4:8.94:0,9,66
chr10	16403510	.	CTCTA	C	6943.35	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=13.752;DP=650;FS=13.557;HRun=0;HaplotypeScore=124.2178;InbreedingCoeff=0.9988;MQ=83.34;MQ0=0;MQRankSum=-6.741;QD=39.90;ReadPosRankSum=5.021;VQSLOD=4.5169;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:63.22:0,63,1639	1/1:0,13:13:23.92:455,24,0	0/0:37,0:36:57.87:0,58,2070	0/0:36,0:33:78.55:0,79,1729	1/1:1,30:31:60.21:1137,60,0	0/0:26,0:26:75.24:0,75,1964	0/0:15,0:15:45.12:0,45,1099	0/0:36,0:36:99:0,102,2392	0/0:26,0:26:72.23:0,72,1742	1/1:0,25:24:69.23:1238,69,0	1/1:1,11:12:21.07:399,21,0	0/0:16,0:16:48.16:0,48,1197	0/0:27,0:27:72.18:0,72,1734	0/0:20,0:20:60.19:0,60,1517	0/0:25,0:25:75.20:0,75,1961	0/0:26,0:26:78.25:0,78,2006	1/1:2,18:20:42.14:797,42,0	0/0:12,0:12:36.07:0,36,838	0/0:29,0:29:77.47:0,77,1918	0/0:24,0:24:69.24:0,69,1823	0/0:29,0:29:84.29:0,84,2244	0/0:18,0:17:42.10:0,42,1104	0/0:11,0:11:30.10:0,30,809	0/0:27,0:27:75.26:0,75,1950	0/0:15,0:15:45.15:0,45,1196	1/1:2,31:32:78.24:1410,78,0	1/1:1,25:26:51.17:938,51,0	1/1:0,14:14:30.10:569,30,0
chr10	16403703	.	GTC	G	410.70	PASS	AB=0.873;AC=7;AF=0.125;AN=56;BaseQRankSum=8.059;DP=777;FS=0.000;HRun=0;HaplotypeScore=149.4359;InbreedingCoeff=-0.1415;MQ=53.00;MQ0=18;MQRankSum=-5.657;QD=2.54;ReadPosRankSum=-3.406;VQSLOD=1.4138;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,114,1899	0/1:15,1:16:23.29:23,0,180	0/1:25,0:3:4.63:5,0,28	0/0:46,0:7:14.52:0,15,146	0/0:16,9:21:8.82:0,9,110	0/0:30,0:30:46.29:0,46,953	0/0:26,0:25:57.17:0,57,943	0/0:41,0:32:87.26:0,87,1368	0/0:25,0:25:63.67:0,64,1040	0/1:18,10:25:99:192,0,124	0/0:12,8:20:11.17:0,11,65	0/0:23,0:23:60.19:0,60,985	0/0:25,0:25:60.19:0,60,984	0/0:22,0:22:57.19:0,57,957	0/0:26,0:26:66.14:0,66,1051	0/0:25,0:25:66.21:0,66,1092	0/1:15,2:16:33.79:34,0,148	0/0:24,0:24:63.16:0,63,1026	0/0:35,0:32:81.17:0,81,1267	0/0:28,0:28:78.25:0,78,1286	0/0:43,0:43:96.31:0,96,1572	0/0:25,0:25:40.23:0,40,893	0/0:27,0:27:66.16:0,66,1054	0/0:34,0:34:63.15:0,63,1031	0/0:18,0:18:39.13:0,39,646	0/1:19,6:19:90.97:91,0,109	0/1:32,4:36:95.65:96,0,388	0/1:12,3:15:97.18:97,0,233
chr10	16403709	.	C	CTG	3706.33	PASS	AB=0.831;AC=14;AF=0.250;AN=56;BaseQRankSum=11.795;DP=791;FS=1.812;HRun=0;HaplotypeScore=162.0066;InbreedingCoeff=0.8141;MQ=54.63;MQ0=16;MQRankSum=-5.094;QD=19.30;ReadPosRankSum=0.508;VQSLOD=3.7031;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,129,1832	1/1:6,8:14:12.10:369,12,0	0/0:26,0:3:6.73:0,7,37	0/0:42,0:10:19.89:0,20,198	1/1:24,6:26:20.99:330,21,0	0/0:33,0:33:65.74:0,66,920	0/0:23,0:23:57.17:0,57,849	0/0:39,0:32:93.27:0,93,1312	0/0:27,0:27:72.65:0,73,998	0/1:22,6:25:3.87:539,0,4	1/1:16,6:22:15.03:233,15,0	0/0:21,0:21:60.19:0,60,892	0/0:22,0:22:60.18:0,60,891	0/0:22,0:22:57.19:0,57,868	0/0:26,0:26:78.12:0,78,1054	0/0:24,0:24:69.21:0,69,1011	1/1:15,4:18:23.74:338,24,0	0/0:27,1:28:38.25:0,38,917	0/0:37,0:32:93:0,93,1242	0/0:29,0:29:78.25:0,78,1164	0/0:44,0:44:96.29:0,96,1429	0/0:25,0:25:63.15:0,63,877	0/0:29,0:29:72.10:0,72,1007	0/0:36,0:36:63.10:0,63,936	0/0:15,0:15:39.13:0,39,593	0/1:25,6:25:20.35:565,0,20	1/1:16,17:33:44.92:864,45,0	1/1:10,5:15:30.02:468,30,0
chr10	16403713	.	CTG	C	512.60	PASS	AB=0.967;AC=12;AF=0.214;AN=56;BaseQRankSum=10.560;DP=777;FS=0.000;HRun=0;HaplotypeScore=172.0005;InbreedingCoeff=0.3597;MQ=54.92;MQ0=12;MQRankSum=-5.742;QD=2.43;ReadPosRankSum=-5.823;VQSLOD=0.5413;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,132,2224	0/1:13,2:15:16.96:17,0,57	0/1:26,0:3:0.07:0,0,30	0/0:39,0:10:6.12:0,6,219	0/1:27,0:23:0.50:46,0,1	0/0:35,0:35:32.12:0,32,1093	0/0:23,0:23:57.18:0,57,1081	0/0:41,0:35:99:0,99,1600	0/0:28,0:28:56.67:0,57,1269	1/1:25,1:23:12.45:186,12,0	1/1:22,0:22:6.69:39,7,0	0/0:21,0:21:63.17:0,63,1101	0/0:21,0:21:60.18:0,60,1102	0/0:23,0:23:57.20:0,57,1078	0/0:25,0:25:69.16:0,69,1193	0/0:23,0:23:66.18:0,66,1197	0/1:17,1:17:25.72:63,0,26	0/0:26,0:26:72.10:0,72,1244	0/0:36,0:31:84.23:0,84,1479	0/0:29,0:29:78.20:0,78,1323	0/0:42,0:42:93.30:0,93,1754	0/0:27,0:27:54.15:0,54,973	0/0:27,0:27:63.08:0,63,1102	0/0:36,0:36:60.04:0,60,1116	0/0:14,0:14:42.04:0,42,692	1/1:30,0:24:1.45:167,1,0	0/1:32,1:33:78.09:106,0,78	0/1:14,0:14:36.01:37,0,36
chr10	16403717	.	CTT	C	2245.92	PASS	AB=0.665;AC=14;AF=0.250;AN=56;BaseQRankSum=12.737;DP=743;FS=3.625;HRun=3;HaplotypeScore=162.8197;InbreedingCoeff=0.8060;MQ=55.31;MQ0=10;MQRankSum=-6.286;QD=12.76;ReadPosRankSum=-0.073;VQSLOD=0.3651;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,136,2370	0/1:7,8:15:3.93:215,0,4	0/0:26,0:5:2.28:0,2,62	0/0:38,0:11:10.35:0,10,271	1/1:15,10:21:10.72:171,11,0	0/0:35,0:35:40.80:0,41,1162	0/0:25,0:25:66.45:0,66,1053	0/0:39,0:35:99:0,105,1746	0/0:28,0:28:81.13:0,81,1454	1/1:16,8:21:6.97:327,7,0	0/1:11,10:21:3.38:54,0,3	0/0:19,0:19:57.15:0,57,1063	0/0:23,0:23:55.41:0,55,997	0/0:24,0:24:57.10:0,57,1028	0/0:23,0:23:66.23:0,66,1274	0/0:23,0:23:69.19:0,69,1248	1/1:8,9:16:32.33:262,32,0	0/0:25,0:25:72.19:0,72,1348	0/0:31,0:28:84.15:0,84,1352	0/0:25,0:25:69.10:0,69,1132	0/0:41,0:41:98.62:0,99,1705	0/0:24,0:24:68.76:0,69,1083	0/0:25,0:25:57.64:0,58,1045	0/0:35,0:35:58.32:0,58,1104	0/0:12,0:12:33.11:0,33,607	1/1:18,11:23:36.47:547,36,0	1/1:13,18:31:58.99:563,59,0	1/1:9,5:14:19.23:292,19,0
chr10	16403741	.	CTTTCTCTCTG	C	3068.11	PASS	AB=0.950;AC=8;AF=0.143;AN=56;BaseQRankSum=6.874;DP=718;FS=1.013;HRun=0;HaplotypeScore=235.6614;InbreedingCoeff=0.0674;MQ=53.91;MQ0=9;MQRankSum=-9.085;QD=20.45;ReadPosRankSum=1.396;VQSLOD=2.9276;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,123,2909	0/1:13,0:13:99:130,0,187	0/0:25,0:9:16.52:0,17,200	0/0:38,0:9:17.92:0,18,222	0/0:23,2:20:22.89:0,23,182	0/0:34,0:34:48.10:0,48,1446	0/0:25,0:25:28.17:0,28,983	0/0:38,0:38:99:0,114,1888	0/0:26,0:27:75.04:0,75,1980	1/1:26,3:26:5.31:1112,5,0	0/1:20,2:22:65.40:107,0,65	0/0:20,0:20:51.93:0,52,1977	0/0:23,0:23:42.10:0,42,1609	0/0:25,0:25:45.07:0,45,1466	0/0:19,0:19:57.17:0,57,1563	0/0:25,0:25:75.24:0,75,2134	0/1:15,0:14:61.55:249,0,62	0/0:22,0:22:63.18:0,63,1526	0/0:28,0:24:67.44:0,67,1971	0/0:19,0:19:48.09:0,48,1265	0/0:33,0:33:70.26:0,70,1910	0/0:26,0:26:57.08:0,57,1291	0/0:22,0:22:35.70:0,36,765	0/0:37,0:37:44.49:0,44,1487	0/0:14,0:14:27.09:0,27,940	0/1:29,2:27:99:1016,0,128	0/1:24,1:24:99:411,0,277	0/1:13,2:13:99:179,0,376
chr10	16403751	.	G	GTC	2687.18	PASS	AB=0.643;AC=14;AF=0.250;AN=56;BaseQRankSum=10.554;DP=708;FS=3.031;HRun=0;HaplotypeScore=155.8843;InbreedingCoeff=0.8203;MQ=49.62;MQ0=20;MQRankSum=-9.874;QD=14.14;ReadPosRankSum=-0.918;VQSLOD=3.2758;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:37:87.18:0,87,1163	1/1:5,8:13:10.26:131,10,0	0/0:18,0:8:10.86:0,11,182	0/0:29,0:6:9.03:0,9,120	0/1:14,16:28:0:0,0,0	0/0:33,0:33:39.10:0,39,501	0/0:22,0:20:18.06:0,18,245	0/0:40,0:38:99:0,108,1439	0/0:30,0:30:73.09:0,73,965	1/1:13,18:26:60.28:927,60,0	1/1:10,14:24:9.03:139,9,0	0/0:20,0:19:51.64:0,52,701	0/0:24,0:24:35.99:0,36,494	0/0:22,0:22:30.08:0,30,394	0/0:18,0:18:36.12:0,36,494	0/0:25,0:24:66.20:0,66,888	1/1:14,8:20:10.09:223,10,0	0/0:21,0:21:57.16:0,57,753	0/0:28,0:24:63.19:0,63,829	0/0:20,0:19:33.11:0,33,452	0/0:26,0:24:33:0,33,428	0/0:28,0:28:30.03:0,30,378	0/0:21,0:19:15.05:0,15,205	0/0:39,0:38:19.30:0,19,392	0/0:15,0:14:24.06:0,24,299	1/1:15,18:28:26.17:873,26,0	0/1:11,14:24:11.40:432,0,11	1/1:9,2:8:10.85:141,11,0
chr10	16403781	.	C	CTG	1989.73	PASS	AB=0.781;AC=10;AF=0.192;AN=52;BaseQRankSum=3.826;DP=718;FS=1.228;HRun=0;HaplotypeScore=163.7207;InbreedingCoeff=0.3918;MQ=45.14;MQ0=43;MQRankSum=-5.750;QD=13.91;ReadPosRankSum=2.975;VQSLOD=3.2104;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:42:62.98:0,63,848	0/1:4,1:5:0:0,0,0	./.	./.	0/0:15,17:31:2.80:0,3,13	0/0:38,0:37:29.50:0,30,377	0/0:28,0:25:3:0,3,46	0/0:50,0:39:99:0,113,1530	0/0:32,0:32:72.07:0,72,1036	1/1:20,11:24:40.10:760,40,0	1/1:9,15:24:1.27:55,1,0	0/0:19,0:18:36.53:0,37,464	0/0:26,0:26:3.95:0,4,192	0/0:27,0:26:24:0,24,274	0/0:25,0:22:12.63:0,13,416	0/0:27,0:24:54.18:0,54,820	0/1:17,3:19:99:186,0,169	0/0:22,0:20:46.58:0,47,684	0/0:23,0:19:53.86:0,54,702	0/0:23,0:22:20.98:0,21,248	0/0:30,0:27:23.76:0,24,255	0/0:28,0:28:12.01:0,12,139	0/0:28,0:25:8.69:0,9,111	0/0:49,0:47:31.06:0,31,375	0/0:15,0:13:11.84:0,12,182	0/1:20,14:27:34.40:726,0,34	0/1:12,8:18:49.82:313,0,50	1/1:6,3:5:7.27:87,7,0
chr10	16403793	.	C	CTG	2111.02	PASS	AB=0.753;AC=23;AF=0.442;AN=52;BaseQRankSum=0.864;DP=725;FS=9.271;HRun=0;HaplotypeScore=154.3378;InbreedingCoeff=0.3493;MQ=44.93;MQ0=57;MQRankSum=-1.565;QD=4.70;ReadPosRankSum=-0.382;VQSLOD=2.5873;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:40:47.53:0,48,381	0/0:3,0:3:3:0,3,25	./.	./.	0/1:37,0:35:2.88:3,0,20	0/1:7,28:34:45.46:142,0,45	1/1:6,21:24:3.01:37,3,0	1/1:45,0:32:80.07:581,80,0	1/1:32,6:37:49.73:521,50,0	0/0:35,0:29:76.65:0,77,601	0/1:24,0:24:1.06:1,0,61	0/0:18,0:17:28:0,28,202	0/1:27,1:27:17.97:145,0,18	1/1:4,20:23:1.04:124,1,0	0/0:34,0:29:30.84:0,31,236	0/0:27,0:23:41.83:0,42,340	0/0:22,0:21:9.01:0,9,153	0/0:22,0:19:31.07:0,31,319	1/1:19,2:19:22.85:364,23,0	1/1:5,17:22:8.83:54,9,0	0/1:11,18:27:40.22:97,0,40	0/1:3,26:28:5.94:60,0,6	1/1:6,20:23:3.01:53,3,0	0/1:17,29:45:28.70:47,0,29	1/1:4,11:13:3.01:54,3,0	0/0:31,0:25:68:0,68,463	0/0:26,0:23:36.25:0,36,268	0/0:13,0:5:5.91:0,6,38
chr10	16403801	.	C	CTG	1955.45	PASS	AB=0.946;AC=19;AF=0.365;AN=52;BaseQRankSum=4.225;DP=689;FS=3.678;HRun=0;HaplotypeScore=140.8344;InbreedingCoeff=0.1409;MQ=44.74;MQ0=60;MQRankSum=0.643;QD=4.99;ReadPosRankSum=0.504;VQSLOD=3.0406;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:36:47.55:0,48,384	0/0:3,0:3:3:0,3,25	./.	./.	0/0:35,0:33:3.11:0,3,66	0/1:34,0:33:64.66:137,0,65	1/1:28,0:23:5.98:68,6,0	0/1:42,0:30:11.35:307,0,11	1/1:39,0:38:40.47:581,40,0	0/0:32,0:26:73.90:0,74,578	0/0:18,0:17:8.97:0,9,74	0/0:19,0:18:28.21:0,28,211	0/1:5,21:25:15.25:128,0,15	0/1:23,1:23:13.89:170,0,14	0/0:33,0:28:28.75:0,29,230	0/0:26,0:22:41.90:0,42,340	0/1:22,0:21:49.41:49,0,92	0/0:24,0:21:36.75:0,37,353	0/1:16,0:16:13.27:246,0,13	1/1:22,0:21:5.84:34,6,0	0/1:27,0:23:28.89:91,0,29	0/1:29,0:28:8.37:102,0,8	1/1:25,0:22:6:78,6,0	0/1:44,0:41:48.48:53,0,48	1/1:14,0:12:6:77,6,0	0/0:30,0:24:59.93:0,60,403	0/0:24,0:21:31.70:0,32,244	0/0:12,0:3:6.40:0,6,40
chr10	16405243	.	T	TCCAGTGGAGACACA	24258.12	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-11.882;DP=800;FS=1.508;HRun=0;HaplotypeScore=309.0536;InbreedingCoeff=0.9895;MQ=87.28;MQ0=2;MQRankSum=-13.627;QD=111.79;ReadPosRankSum=0.402;VQSLOD=3.9981;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,154,5901	1/1:6,11:18:42.14:2532,42,0	0/0:31,0:31:80.62:0,81,2716	0/0:36,0:36:50.53:0,51,2480	1/1:6,11:20:27.09:1888,27,0	0/0:32,0:32:96.29:0,96,3687	0/0:27,0:26:81.23:0,81,3043	0/0:27,0:27:78.16:0,78,2691	0/0:30,0:30:84.22:0,84,3128	1/1:14,20:44:99:4955,108,0	1/1:10,14:25:27.09:1822,27,0	0/0:29,0:28:81.27:0,81,3064	0/0:35,0:35:99:0,105,3929	0/0:26,0:26:75.21:0,75,2936	0/0:24,0:24:69.18:0,69,2318	0/0:20,0:20:60.16:0,60,2016	1/1:4,12:21:24.08:1603,24,0	0/0:19,0:19:57.15:0,57,2143	0/0:24,0:24:63.08:0,63,1816	0/0:36,0:36:96.33:0,96,3730	0/0:34,0:34:99:0,102,3621	0/0:26,0:26:72.24:0,72,2768	0/0:19,0:19:51.09:0,51,1712	0/0:31,0:31:87.30:0,87,3555	0/0:25,0:25:75.25:0,75,2863	1/1:10,20:41:99:6056,114,0	1/1:9,22:38:68.68:4767,69,0	1/1:0,5:8:9.03:634,9,0
chr10	16406603	.	GA	G	4478.53	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=17.066;DP=635;FS=2.632;HRun=4;HaplotypeScore=105.1688;InbreedingCoeff=0.9888;MQ=89.38;MQ0=1;MQRankSum=-14.625;QD=30.26;ReadPosRankSum=3.172;VQSLOD=4.6810;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,135,1872	1/1:0,4:4:9.03:108,9,0	0/0:34,0:34:86.80:0,87,1183	0/0:19,0:19:57.15:0,57,738	1/1:2,20:22:51.16:611,51,0	0/0:21,0:21:60.18:0,60,818	0/0:26,0:26:78.26:0,78,1089	0/0:30,0:30:87.25:0,87,1136	0/0:35,0:35:99:0,102,1413	1/1:3,20:23:60.17:707,60,0	1/1:0,15:15:42.13:503,42,0	0/0:16,0:16:45.14:0,45,612	0/0:26,0:26:78.26:0,78,1089	0/0:29,0:29:87.29:0,87,1212	0/0:31,0:31:90.29:0,90,1242	0/0:21,0:21:60.20:0,60,837	1/1:2,21:23:48.14:575,48,0	0/0:27,0:27:81.27:0,81,1134	0/0:13,0:13:33.10:0,33,443	0/0:15,0:15:45.15:0,45,630	0/0:28,0:28:81.27:0,81,1127	0/0:15,0:15:42.14:0,42,585	0/0:14,0:14:39.12:0,39,522	0/0:26,0:26:78.23:0,78,1052	0/0:14,0:14:42.13:0,42,568	1/1:0,15:14:42.13:503,42,0	1/1:0,38:37:99:1256,105,0	1/1:1,7:7:18.06:216,18,0
chr10	16409263	.	GGA	G	226.59	PASS	AB=0.967;AC=14;AF=0.304;AN=46;BaseQRankSum=-1.044;DP=551;FS=28.440;HRun=0;HaplotypeScore=91.3466;InbreedingCoeff=0.3715;MQ=74.75;MQ0=11;MQRankSum=0.757;QD=1.39;ReadPosRankSum=-0.261;VQSLOD=0.1744;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:23:8.85:0,9,57	0/0:4,0:3:2.80:0,3,13	./.	./.	0/0:23,0:22:2.98:0,3,22	1/1:15,2:17:3.01:32,3,0	1/1:22,0:21:0.85:3,1,0	0/1:27,0:27:0.01:0,0,0	1/1:11,2:13:12.01:120,12,0	0/0:23,0:23:17.46:0,17,154	0/0:13,0:12:3.01:0,3,41	0/0:15,0:14:17.72:0,18,135	1/1:11,0:11:6:56,6,0	1/1:18,1:18:11.66:95,12,0	0/0:11,0:11:5.99:0,6,48	0/0:14,0:22:11.92:0,12,91	0/0:19,0:19:12.46:0,12,101	0/0:24,0:23:15.41:0,15,130	0/0:17,0:17:3:0,3,28	0/1:9,0:9:18.87:19,0,35	0/1:24,1:25:26.14:26,0,35	./.	./.	0/1:17,2:18:14.11:14,0,178	./.	0/0:27,0:27:24.67:0,25,197	0/0:19,0:20:8.94:0,9,68	0/0:12,0:12:17.58:0,18,174
chr10	16409491	.	A	AGTGTGT	2903.44	PASS	AB=1.000;AC=27;AF=0.540;AN=50;BaseQRankSum=-1.706;DP=712;FS=0.561;HRun=0;HaplotypeScore=188.5213;InbreedingCoeff=0.6721;MQ=57.06;MQ0=21;MQRankSum=-3.141;QD=7.35;ReadPosRankSum=-1.878;VQSLOD=2.4039;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:46:50.05:0,50,745	0/0:7,0:9:7.85:0,8,61	./.	./.	0/0:11,0:17:8.35:0,8,90	1/1:17,3:18:8.99:184,9,0	1/1:29,1:30:24.20:349,24,0	1/1:27,0:25:17.91:186,18,0	1/1:14,9:28:16.63:389,17,0	0/1:17,0:17:65.37:65,0,72	0/0:13,0:18:15.05:0,15,209	0/0:25,0:27:36.58:0,37,653	1/1:17,5:23:19.88:539,20,0	1/1:18,2:21:11.38:122,11,0	0/0:22,0:26:48.05:0,48,719	0/0:20,0:22:39.55:0,40,734	0/0:19,0:30:21.37:0,21,331	0/1:19,0:21:44.08:44,0,367	1/1:31,0:26:23.48:295,23,0	./.	1/1:44,1:42:14.42:181,14,0	1/1:23,2:27:18.69:272,19,0	1/1:18,0:17:9.16:74,9,0	1/1:26,6:34:20.88:279,21,0	1/1:13,4:18:8.65:98,9,0	0/1:23,0:24:20.93:21,0,114	0/0:11,0:15:12.51:0,13,163	0/0:10,0:12:6.02:0,6,83
chr10	16409550	.	CAGAGGCAG	C	3801.44	PASS	AB=0.670;AC=23;AF=0.411;AN=56;BaseQRankSum=3.331;DP=721;FS=0.000;HRun=0;HaplotypeScore=204.1116;InbreedingCoeff=0.6299;MQ=59.16;MQ0=13;MQRankSum=-2.863;QD=10.77;ReadPosRankSum=-2.162;VQSLOD=2.3491;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:48,1:49:99:0,105,3647	0/0:9,0:9:21.06:0,21,604	0/0:49,0:22:26.24:0,26,786	0/1:60,0:28:5.99:6,0,652	0/0:20,0:20:23.07:0,23,809	0/1:5,19:24:2.53:143,0,3	1/1:13,18:29:4.09:152,4,0	0/1:11,17:28:8.72:823,0,9	1/1:10,6:16:15.05:357,15,0	0/0:31,0:31:69.24:0,69,1969	0/0:10,0:10:11.90:0,12,421	0/0:29,0:28:69.11:0,69,2546	1/1:6,20:26:24.01:597,24,0	1/1:4,13:17:5.83:156,6,0	0/0:33,0:33:84.29:0,84,2810	0/0:23,1:23:39.13:0,39,1324	0/0:38,0:38:52.42:0,52,1387	0/0:18,0:18:0.64:0,1,1250	1/1:10,10:18:30.10:707,30,0	1/1:8,3:11:10.28:256,10,0	1/1:17,3:20:12.88:299,13,0	0/1:6,15:21:0:0,0,1	0/1:4,8:12:0:0,0,0	1/1:19,25:42:2.93:78,3,0	1/1:5,17:22:5.64:228,6,0	0/0:34,0:33:72.21:0,72,2098	0/0:17,0:17:16.85:0,17,960	0/0:6,0:6:5.52:0,6,182
chr10	16409569	.	AGG	A	838.69	PASS	AB=0.979;AC=12;AF=0.214;AN=56;BaseQRankSum=6.719;DP=686;FS=0.508;HRun=2;HaplotypeScore=156.4669;InbreedingCoeff=-0.1172;MQ=52.28;MQ0=18;MQRankSum=-4.385;QD=3.58;ReadPosRankSum=2.878;VQSLOD=-0.4406;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,132,2582	0/0:9,0:9:26.29:0,26,424	0/0:49,0:17:51.04:0,51,897	0/0:45,0:21:44.95:0,45,737	0/1:21,0:20:18.50:19,0,455	0/0:23,0:23:5.58:0,6,304	1/1:19,0:19:3.50:20,3,0	0/1:26,0:26:99:445,0,396	0/1:21,1:22:43.91:44,0,509	0/0:30,0:30:90.09:0,90,1650	0/0:11,0:11:17.57:0,18,324	0/0:33,0:32:96.32:0,96,1894	0/1:23,0:23:67.65:68,0,133	0/1:16,0:16:6.95:7,0,148	0/0:36,0:36:99:0,102,1944	0/0:21,0:20:51.18:0,51,1030	0/0:35,0:35:53.47:0,53,1007	0/0:23,0:23:38.13:0,38,1125	0/1:17,0:12:95.22:118,0,95	0/1:11,0:11:78.47:94,0,78	0/1:19,3:22:99:152,0,217	0/0:18,1:19:9.03:0,9,181	0/0:12,0:12:3.01:0,3,61	0/1:35,2:36:0.48:0,0,144	0/1:20,0:20:14.08:14,0,179	0/0:34,0:34:95.96:0,96,1607	0/0:17,0:17:26.01:0,26,725	0/0:7,0:7:11.46:0,11,172
chr10	16409603	.	A	ACAGAGAAG	6738.52	PASS	AB=0.557;AC=15;AF=0.268;AN=56;BaseQRankSum=4.015;DP=683;FS=19.872;HRun=0;HaplotypeScore=199.9510;InbreedingCoeff=0.8378;MQ=47.59;MQ0=12;MQRankSum=-4.936;QD=41.60;ReadPosRankSum=-2.140;VQSLOD=2.3602;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,120,2724	1/1:5,2:7:18.06:485,18,0	0/0:19,0:5:3:0,3,43	0/0:25,0:6:9.03:0,9,111	1/1:3,13:17:24.55:544,25,0	0/0:20,0:20:27.02:0,27,735	0/0:26,0:26:18.83:0,19,630	0/0:32,0:25:59.66:0,60,1099	0/0:25,0:25:63.21:0,63,1558	1/1:22,3:23:63.21:1709,63,0	1/1:14,1:15:23.99:332,24,0	0/0:36,0:35:93.32:0,93,2296	0/0:25,0:25:53.54:0,54,1206	0/0:20,0:20:35.18:0,35,836	0/0:29,0:29:78.27:0,78,2021	0/0:16,0:16:35.97:0,36,777	0/1:7,23:34:13.58:14,0,96	0/0:25,0:25:51.24:0,51,1505	0/0:24,0:19:43.86:0,44,824	0/0:10,0:10:21.07:0,21,506	0/0:29,0:27:46.33:0,46,980	0/0:26,0:26:34.34:0,34,801	0/0:14,0:14:7.27:0,7,208	0/0:42,0:40:29.62:0,30,679	0/0:23,0:23:48.52:0,49,1135	1/1:5,22:29:66.21:2028,66,0	1/1:21,2:23:54.18:1386,54,0	1/1:1,6:11:6.02:241,6,0
chr10	16409693	.	TGACAGAGA	T	3843.51	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=5.667;DP=740;FS=14.144;HRun=0;HaplotypeScore=199.2936;InbreedingCoeff=0.9003;MQ=62.27;MQ0=13;MQRankSum=-4.903;QD=32.03;ReadPosRankSum=-0.925;VQSLOD=2.3275;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,129,3369	1/1:4,2:4:3.01:55,3,0	0/0:36,0:20:28.75:0,29,385	0/0:67,0:28:3.10:0,3,60	1/1:12,5:14:20.96:318,21,0	0/0:22,0:21:50.91:0,51,1225	0/0:33,0:32:73.44:0,73,1538	0/0:37,0:32:93.16:0,93,1576	0/0:21,0:21:56.58:0,57,1333	1/1:17,7:23:68.54:1096,69,0	1/1:8,5:12:8.90:200,9,0	0/0:34,0:34:99:0,99,2912	0/0:17,0:17:45:0,45,972	0/0:25,0:25:60.15:0,60,1449	0/0:24,0:24:69.18:0,69,1913	0/0:19,0:19:51.14:0,51,1610	1/1:14,2:15:4.22:300,4,0	0/0:28,0:28:72.66:0,73,1888	0/0:34,0:32:91.76:0,92,1695	0/0:20,0:20:57.09:0,57,1346	0/0:40,0:40:99:0,102,2236	0/0:23,0:23:56.03:0,56,1735	0/0:26,0:26:63:0,63,1349	0/0:51,0:47:99:0,102,2448	0/0:16,0:16:39.11:0,39,1236	1/1:14,8:19:57.07:1015,57,0	1/1:10,7:17:32.91:625,33,0	1/1:4,1:5:12.03:234,12,0
chr10	16409755	.	ACAGAGAGG	A	2740.41	PASS	AB=0.919;AC=13;AF=0.241;AN=54;BaseQRankSum=4.962;DP=763;FS=21.032;HRun=0;HaplotypeScore=172.4100;InbreedingCoeff=0.6156;MQ=48.30;MQ0=46;MQRankSum=-2.425;QD=17.79;ReadPosRankSum=-2.481;VQSLOD=1.3391;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:50:99:0,106,2799	1/1:5,0:3:8.95:91,9,0	0/0:41,0:3:3.01:0,3,32	./.	0/1:18,3:17:61.47:102,0,61	0/0:21,0:21:38.92:0,39,850	0/0:36,0:33:75.59:0,76,1547	0/0:44,0:34:80.36:0,80,1320	0/0:25,0:25:59.82:0,60,1612	0/1:30,1:27:65.65:995,0,66	1/1:17,1:17:15.01:211,15,0	0/0:31,0:31:78.22:0,78,2044	0/0:16,0:16:45.12:0,45,1043	0/0:22,0:22:60.98:0,61,1466	0/0:21,0:19:45.14:0,45,1289	0/0:23,0:23:69.18:0,69,1616	1/1:17,1:18:10.46:259,10,0	0/0:26,0:26:57.09:0,57,1213	0/0:22,0:15:30.06:0,30,698	0/0:21,0:21:39.35:0,39,1051	0/0:56,0:52:99:0,115,2677	0/0:16,0:16:17.09:0,17,459	0/0:23,0:20:39.57:0,40,930	0/0:56,0:51:97.32:0,97,2241	0/0:16,0:15:33.04:0,33,718	0/1:29,3:24:30.33:483,0,30	1/1:17,3:20:37.28:612,37,0	1/1:2,7:8:6.02:158,6,0
chr10	16409861	.	T	TGGGAGGCATGCTGGTGTGTG	16829.39	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=0.988;DP=598;FS=17.184;HRun=0;HaplotypeScore=291.3236;InbreedingCoeff=0.9698;MQ=84.20;MQ0=0;MQRankSum=-11.625;QD=119.36;ReadPosRankSum=0.271;VQSLOD=3.2471;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:78.25:0,78,3725	1/1:5,1:6:15.05:933,15,0	0/0:23,0:23:60.07:0,60,2314	0/0:22,0:22:32.56:0,33,1899	1/1:13,1:13:6.02:363,6,0	0/0:18,0:18:45.15:0,45,2208	0/0:32,0:32:93.30:0,93,4593	0/0:23,0:23:66.23:0,66,2760	0/0:23,0:23:63.20:0,63,3146	1/1:18,6:24:54.16:3957,54,0	1/1:8,4:16:14.69:1090,15,0	0/0:36,0:36:99:0,99,4932	0/0:15,0:15:45.15:0,45,2353	0/0:16,0:16:45.14:0,45,2167	0/0:22,0:22:57.20:0,57,3026	0/0:20,0:20:57.18:0,57,2755	1/1:24,3:26:33.11:2481,33,0	0/0:27,0:27:72.18:0,72,3129	0/0:23,0:23:54.19:0,54,2202	0/0:12,0:12:30.10:0,30,1500	0/0:56,0:56:99:0,163,8552	0/0:12,0:12:27.08:0,27,1335	0/0:7,0:7:12.04:0,12,600	0/0:25,0:25:66.23:0,66,3118	0/0:13,0:13:30.09:0,30,1488	1/1:11,7:21:51.17:3388,51,0	1/1:11,8:19:42.14:3449,42,0	1/1:7,1:8:18.06:1170,18,0
chr10	16410741	.	T	TA	1471.74	PASS	AB=0.855;AC=16;AF=0.286;AN=56;BaseQRankSum=4.729;DP=600;FS=2.997;HRun=13;HaplotypeScore=108.5197;InbreedingCoeff=0.5805;MQ=69.04;MQ0=2;MQRankSum=-1.473;QD=7.43;ReadPosRankSum=-2.758;VQSLOD=2.2734;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:41:22.97:0,23,370	0/1:3,1:4:14.58:22,0,15	0/0:19,0:15:5.82:0,6,54	0/0:17,1:11:0.17:0,0,1	0/1:17,5:22:22.16:90,0,22	0/1:13,2:15:26.74:27,0,134	0/0:25,0:25:33.88:0,34,241	0/0:24,0:25:42:0,42,267	0/0:20,0:21:22.69:0,23,260	1/1:21,8:30:21.02:286,21,0	1/1:9,5:14:18.02:167,18,0	0/0:27,1:31:11.70:0,12,210	0/0:12,0:12:15.72:0,16,105	0/0:17,0:18:31.05:0,31,191	0/0:18,0:18:32.61:0,33,223	0/0:25,0:27:58.42:0,58,383	1/1:17,9:26:10.92:215,11,0	0/0:22,0:21:44.52:0,45,308	0/1:22,2:24:3.20:3,0,256	0/0:22,1:23:4.63:0,5,174	0/0:15,0:16:28.63:0,29,187	0/0:20,1:21:3.91:0,4,168	0/0:15,0:15:22.90:0,23,149	0/0:30,0:30:49.40:0,49,329	0/0:18,0:18:25.46:0,25,180	1/1:17,14:32:33.41:433,33,0	1/1:13,7:21:22.11:309,22,0	1/1:4,6:10:11.98:104,12,0
chr10	16410764	.	TGA	T	395.61	PASS	AB=0.983;AC=14;AF=0.250;AN=56;BaseQRankSum=7.544;DP=547;FS=1.972;HRun=0;HaplotypeScore=109.0679;InbreedingCoeff=-0.2579;MQ=59.05;MQ0=8;MQRankSum=3.646;QD=1.61;ReadPosRankSum=-1.589;VQSLOD=1.9079;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:35:15.42:0,15,745	0/0:2,0:2:3.01:0,3,34	0/0:25,0:9:19.86:0,20,169	0/0:30,0:12:3.58:0,4,93	0/0:12,0:12:8.36:0,8,58	0/1:16,1:17:66.17:66,0,113	0/1:25,0:25:26.04:26,0,171	0/1:26,0:25:4.74:5,0,268	0/0:19,0:19:27.84:0,28,304	0/0:19,0:19:6.03:0,6,368	0/0:15,0:14:14.59:0,15,141	0/0:22,0:22:31.56:0,32,592	0/1:7,0:7:21.07:34,0,21	0/1:13,0:13:23.27:36,0,23	0/0:18,0:18:48.09:0,48,746	0/0:20,0:20:28.89:0,29,608	0/0:22,0:22:32.82:0,33,325	0/0:19,0:18:1.96:0,2,507	0/1:20,1:20:24.67:25,0,246	0/1:19,0:19:16.18:16,0,90	0/1:38,0:38:73.05:92,0,73	0/1:14,0:14:19.61:20,0,110	0/1:13,1:13:36.14:36,0,77	0/1:23,1:23:62.79:111,0,63	1/1:22,0:21:0.22:52,0,0	0/0:29,0:29:42.85:0,43,348	0/0:14,0:14:19.96:0,20,202	0/1:5,0:5:24.01:24,0,64
chr10	16410766	.	AGT	A	2673.78	PASS	AB=0.901;AC=28;AF=0.519;AN=54;BaseQRankSum=0.220;DP=541;FS=0.000;HRun=0;HaplotypeScore=101.8389;InbreedingCoeff=0.5165;MQ=58.70;MQ0=8;MQRankSum=2.412;QD=8.23;ReadPosRankSum=0.720;VQSLOD=3.2949;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,2:36:6.09:0,6,475	0/0:1,0:2:3:0,3,26	./.	0/0:31,0:12:3.47:0,3,26	0/1:10,0:11:0:0,0,0	1/1:7,9:16:20.63:194,21,0	1/1:14,11:26:29.60:313,30,0	1/1:16,7:23:21:195,21,0	0/1:17,1:19:17.90:18,0,97	0/0:18,0:20:19.06:0,19,228	0/0:13,0:15:6:0,6,68	0/1:21,2:23:58.35:58,0,433	1/1:2,4:7:14.87:148,15,0	1/1:4,7:11:18.05:201,18,0	0/0:18,0:18:36.11:0,36,525	0/1:20,0:20:4.16:4,0,340	0/0:15,0:21:20.86:0,21,195	0/1:16,2:17:33.94:34,0,363	1/1:17,2:21:14.79:132,15,0	1/1:9,8:19:20.89:215,21,0	1/1:13,26:40:38.81:557,39,0	0/1:7,4:13:30.50:119,0,30	1/1:8,6:13:12.03:134,12,0	1/1:10,12:22:32.92:342,33,0	1/1:8,11:18:18.05:201,18,0	0/0:26,0:26:27.01:0,27,305	0/0:11,0:14:14.97:0,15,139	0/0:6,0:6:6.46:0,6,60
chr10	16410819	.	C	CTGTG	4585.02	PASS	AB=0.735;AC=15;AF=0.268;AN=56;BaseQRankSum=-6.008;DP=722;FS=4.521;HRun=0;HaplotypeScore=157.9154;InbreedingCoeff=0.6787;MQ=57.61;MQ0=13;MQRankSum=-3.074;QD=25.76;ReadPosRankSum=0.451;VQSLOD=4.7475;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:34:72.23:0,72,1192	1/1:1,3:4:3.01:75,3,0	0/0:59,0:27:24.13:0,24,541	0/1:48,0:23:6.48:6,0,317	0/1:6,8:15:26.85:500,0,27	0/0:21,0:22:54.18:0,54,888	0/0:33,0:33:69.21:0,69,1129	0/0:37,0:37:94.55:0,95,1530	0/0:24,0:24:33.19:0,33,852	1/1:9,16:24:51.13:1155,51,0	1/1:3,7:10:6.02:150,6,0	0/0:26,0:26:44.98:0,45,725	0/0:11,0:11:24.06:0,24,377	0/0:23,0:23:60.20:0,60,1014	0/0:33,0:33:78.25:0,78,1288	0/0:25,0:27:60.19:0,60,960	0/1:5,14:21:6.75:632,0,7	0/0:21,0:21:38.89:0,39,534	0/0:15,0:14:33.11:0,33,560	0/0:16,0:17:23.71:0,24,358	0/0:82,0:82:99:0,156,2486	0/0:14,0:14:27.09:0,27,456	0/0:16,0:16:29.90:0,30,509	0/0:25,0:26:54.11:0,54,833	0/0:19,0:19:33.08:0,33,507	1/1:7,17:26:57.15:1251,57,0	1/1:5,12:17:26.62:596,27,0	1/1:3,5:9:5.45:219,5,0
chr10	16411185	.	ATGTG	A	5309.28	PASS	AB=1.000;AC=27;AF=0.500;AN=54;BaseQRankSum=7.106;DP=935;FS=4.730;HRun=0;HaplotypeScore=173.7998;InbreedingCoeff=0.9037;MQ=57.71;MQ0=20;MQRankSum=0.584;QD=10.77;ReadPosRankSum=2.404;VQSLOD=4.2219;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:49:63.19:0,63,1293	0/0:8,0:9:5.75:0,6,81	0/1:86,0:22:0:0,0,0	./.	0/0:20,0:20:45.02:0,45,847	1/1:12,14:27:15.05:238,15,0	1/1:13,14:27:21.07:334,21,0	1/1:30,9:38:24.07:350,24,0	1/1:14,16:31:33.10:504,33,0	0/0:32,0:33:50.87:0,51,1068	0/0:11,0:11:15.03:0,15,305	0/0:34,1:36:3.31:0,3,987	1/1:18,9:27:42.61:629,43,0	1/1:14,8:22:27.48:398,27,0	0/0:26,0:28:57.35:0,57,954	0/0:34,0:35:56.52:0,57,1207	0/0:46,0:46:66.40:0,66,1269	0/0:27,0:27:39.10:0,39,830	1/1:19,6:24:22.84:295,23,0	1/1:15,11:26:18.03:285,18,0	1/1:50,25:74:32.75:523,33,0	1/1:7,21:29:32.74:524,33,0	1/1:10,6:17:5.82:96,6,0	1/1:13,24:37:54.18:849,54,0	1/1:9,13:24:18.06:284,18,0	0/0:28,0:27:45.15:0,45,939	0/0:22,0:26:47.46:0,47,867	0/0:5,0:5:8.95:0,9,113
chr10	16413704	.	AC	A	7312.30	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=15.395;DP=801;FS=15.018;HRun=2;HaplotypeScore=80.6031;InbreedingCoeff=0.9993;MQ=88.49;MQ0=0;MQRankSum=-9.135;QD=36.93;ReadPosRankSum=3.945;VQSLOD=3.8871;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:56:99:0,169,2617	1/1:0,17:17:45.15:628,45,0	0/0:27,0:27:74.91:0,75,1107	0/0:33,0:33:92.86:0,93,1325	1/1:0,34:34:87.25:1183,87,0	0/0:23,0:23:66.22:0,66,1044	0/0:31,0:31:93.30:0,93,1449	0/0:26,0:26:72.11:0,72,1043	0/0:32,0:32:96.31:0,96,1497	1/1:0,25:25:72.24:992,72,0	1/1:0,17:17:45.15:620,45,0	0/0:21,0:21:63.18:0,63,952	0/0:40,0:40:99:0,120,1829	0/0:24,0:24:72.23:0,72,1107	0/0:27,0:27:81.22:0,81,1231	0/0:34,0:34:99:0,102,1576	1/1:0,38:38:99:1383,99,0	0/0:26,0:26:72.23:0,72,1106	0/0:23,0:23:66.18:0,66,967	0/0:22,0:22:66.22:0,66,1046	0/0:61,0:61:99:0,178,2732	0/0:28,0:28:84.23:0,84,1286	0/0:19,0:19:54.17:0,54,835	0/0:29,0:29:81.13:0,81,1182	0/0:21,0:21:60.20:0,60,949	1/1:0,28:28:81.27:1129,81,0	1/1:0,30:30:78.26:1088,78,0	1/1:0,9:9:21.07:289,21,0
chr10	16413933	.	A	AC	5271.01	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=15.353;DP=678;FS=1.256;HRun=1;HaplotypeScore=74.0165;InbreedingCoeff=0.9689;MQ=54.14;MQ0=8;MQRankSum=-8.724;QD=36.35;ReadPosRankSum=-2.005;VQSLOD=4.4466;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:52:99:0,156,1973	1/1:0,12:12:33.11:494,33,0	0/0:17,0:8:21.07:0,21,273	0/0:14,0:7:21.07:0,21,270	1/1:0,22:22:54.06:792,54,0	0/0:20,0:19:57.18:0,57,739	0/0:34,1:35:99:0,99,1271	0/0:27,0:27:78.24:0,78,999	0/0:22,0:22:66.21:0,66,857	1/1:0,30:30:85.53:1260,86,0	1/1:0,13:12:30.10:448,30,0	0/0:18,0:18:54.18:0,54,701	0/0:33,0:33:93.30:0,93,1207	0/0:25,0:25:75.24:0,75,974	0/0:34,0:33:99:0,99,1285	0/0:28,0:28:81.26:0,81,1052	1/1:2,14:16:33.11:485,33,0	0/0:31,0:30:90.26:0,90,1150	0/0:25,0:23:57.16:0,57,711	0/0:30,0:30:84.27:0,84,1090	0/0:35,0:35:99:0,102,1300	0/0:22,0:21:63.19:0,63,804	0/0:17,0:17:51.17:0,51,662	0/0:25,0:25:66.21:0,66,857	0/0:21,0:21:60.19:0,60,776	1/1:2,25:25:72.19:1032,72,0	1/1:1,22:22:48.16:716,48,0	1/1:0,2:2:3.01:45,3,0
chr10	16414046	.	A	AGAGAGAGC	4082.35	PASS	AB=0.958;AC=15;AF=0.268;AN=56;BaseQRankSum=12.200;DP=597;FS=0.467;HRun=0;HaplotypeScore=177.5400;InbreedingCoeff=0.8836;MQ=75.88;MQ0=2;MQRankSum=-7.905;QD=30.47;ReadPosRankSum=-2.463;VQSLOD=2.9888;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,111,2872	1/1:10,2:10:21.06:454,21,0	0/0:26,0:19:37.02:0,37,772	0/0:47,0:32:43.87:0,44,972	0/1:22,0:23:9.79:55,0,10	0/0:18,0:18:54.13:0,54,1326	0/0:28,0:28:84.25:0,84,2075	0/0:25,0:25:69.17:0,69,1341	0/0:17,0:17:51.08:0,51,1205	1/1:7,15:22:54.36:1067,54,0	1/1:3,7:10:3:132,3,0	0/0:17,0:17:48.15:0,48,1230	0/0:15,0:15:45.15:0,45,1202	0/0:20,0:20:54.16:0,54,1400	0/0:25,0:25:69.21:0,69,1765	0/0:27,0:27:78.25:0,78,2085	1/1:13,1:14:29.90:442,30,0	0/0:13,0:13:36.12:0,36,985	0/0:23,0:22:66.21:0,66,1593	0/0:21,0:21:60.18:0,60,1401	0/0:18,0:18:51.10:0,51,1144	0/0:19,0:19:51.14:0,51,1235	0/0:24,0:24:69.18:0,69,1587	0/0:26,0:26:78.21:0,78,2009	0/0:16,0:16:45.13:0,45,1058	1/1:21,0:18:45.07:836,45,0	1/1:18,2:19:36.01:743,36,0	1/1:7,0:7:17.96:353,18,0
chr10	16414302	.	G	GA	9419.10	PASS	AB=0.773;AC=42;AF=0.750;AN=56;BaseQRankSum=-7.055;DP=549;FS=4.545;HRun=9;HaplotypeScore=54.7052;InbreedingCoeff=0.7965;MQ=62.31;MQ0=3;MQRankSum=-1.478;QD=22.11;ReadPosRankSum=1.841;VQSLOD=5.7684;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,2:33:44.78:0,45,617	1/1:0,3:3:6.02:66,6,0	0/0:13,0:6:17.96:0,18,149	0/1:18,0:11:13.91:14,0,67	1/1:4,23:27:57.08:599,57,0	1/1:2,19:21:45.12:498,45,0	1/1:5,23:28:54.15:597,54,0	1/1:2,22:24:60.14:652,60,0	1/1:2,16:18:42.11:465,42,0	1/1:1,21:23:59.91:630,60,0	1/1:2,8:9:21.05:228,21,0	0/0:14,0:14:32.97:0,33,285	1/1:3,19:22:48.09:517,48,0	1/1:6,17:23:36.10:398,36,0	0/0:25,0:25:56.02:0,56,474	0/0:18,1:19:11.79:0,12,327	1/1:3,31:34:87.24:962,87,0	0/0:19,0:19:53.99:0,54,468	1/1:9,11:20:36.06:371,36,0	1/1:1,16:17:46.34:462,46,0	1/1:3,9:12:18.05:199,18,0	1/1:1,12:13:30.08:330,30,0	0/1:2,10:11:1.99:206,0,2	1/1:0,23:23:60.16:659,60,0	1/1:1,11:12:24.06:265,24,0	1/1:2,21:23:57.15:630,57,0	1/1:7,16:22:4.50:274,4,0	1/1:0,20:20:36.10:398,36,0
chr10	16414664	.	ATGTGTGTG	A	134.96	PASS	AB=0.625;AC=5;AF=0.104;AN=48;BaseQRankSum=1.651;DP=263;FS=2.406;HRun=0;HaplotypeScore=78.5723;InbreedingCoeff=0.4462;MQ=67.86;MQ0=2;MQRankSum=-1.604;QD=9.00;ReadPosRankSum=0.122;VQSLOD=1.7094;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:45.28:0,45,1669	./.	0/0:15,0:9:9.03:0,9,195	0/0:9,0:5:6.02:0,6,183	./.	0/0:8,0:8:11.87:0,12,197	0/0:7,0:7:12.04:0,12,408	0/0:28,0:28:72.24:0,72,2703	0/0:7,0:7:18.06:0,18,737	1/1:7,0:7:6.02:127,6,0	./.	0/0:9,0:9:18.06:0,18,731	0/0:3,0:4:9.50:0,10,298	0/0:10,0:10:21.06:0,21,668	0/0:11,0:11:24.08:0,24,911	0/0:10,0:10:24.07:0,24,792	0/1:2,2:5:14.84:35,0,15	0/0:23,0:23:54.16:0,54,2005	0/0:9,0:9:22.63:0,23,708	0/0:8,0:9:18.05:0,18,591	0/0:5,0:5:9.03:0,9,309	0/0:10,0:10:21.07:0,21,717	0/0:9,0:9:20.96:0,21,697	0/0:5,0:5:6.02:0,6,160	0/0:3,0:4:5.91:0,6,66	1/1:2,1:3:3.01:79,3,0	./.	0/0:7,0:7:5.80:0,6,43
chr10	16414678	.	G	GTATATATATA	685.47	PASS	AB=0.875;AC=9;AF=0.180;AN=50;BaseQRankSum=4.322;DP=238;FS=1.349;HRun=0;HaplotypeScore=85.8022;InbreedingCoeff=0.5272;MQ=59.55;MQ0=3;MQRankSum=-4.654;QD=24.48;ReadPosRankSum=-1.666;VQSLOD=2.6718;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:49.08:0,49,1390	./.	0/0:11,0:4:9.02:0,9,178	0/0:10,0:6:6.02:0,6,160	./.	0/0:8,0:8:0.64:0,1,90	0/0:6,0:6:12.04:0,12,372	0/0:29,0:29:87.28:0,87,2666	0/0:6,0:6:18.06:0,18,609	1/1:1,3:5:6.49:146,6,0	./.	0/0:7,0:7:20.10:0,20,617	0/0:4,0:4:8.87:0,9,280	0/0:7,0:7:21.06:0,21,590	0/0:11,0:11:27.09:0,27,879	0/0:8,0:8:24.07:0,24,706	0/1:6,1:7:9.03:344,0,9	0/0:22,0:21:56.96:0,57,1718	0/0:9,0:9:24.55:0,25,723	0/0:8,0:8:17.99:0,18,550	0/0:4,0:4:9.03:0,9,292	0/0:8,0:8:21.07:0,21,639	0/0:9,0:9:20.96:0,21,620	0/0:3,0:3:5.44:0,5,158	0/0:4,0:4:3.01:0,3,50	1/1:3,0:3:3.01:79,3,0	1/1:5,0:5:3.01:55,3,0	1/1:3,5:8:4.44:189,4,0
chr10	16414696	.	ATGTG	A	429.82	PASS	AB=0.932;AC=5;AF=0.114;AN=44;BaseQRankSum=3.096;DP=172;FS=0.000;HRun=0;HaplotypeScore=51.6687;InbreedingCoeff=0.1952;MQ=63.50;MQ0=3;MQRankSum=-0.623;QD=8.43;ReadPosRankSum=0.040;VQSLOD=1.9551;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:39.19:0,39,854	./.	0/1:5,0:3:0:0,0,0	0/0:9,0:5:1.42:0,1,4	./.	0/0:5,0:5:9.34:0,9,55	./.	0/1:26,9:35:99:462,0,1240	0/0:4,0:4:12.04:0,12,192	0/0:2,0:2:3.01:0,3,30	./.	0/0:5,0:5:15.01:0,15,277	0/0:4,0:4:6.02:0,6,83	0/0:2,0:2:6.02:0,6,96	0/0:10,0:10:21.07:0,21,433	0/0:4,0:4:12.04:0,12,185	0/1:7,0:7:11.79:14,0,12	0/0:21,0:20:54.14:0,54,1194	0/0:2,0:2:6.02:0,6,101	0/0:6,0:6:14.64:0,15,198	./.	0/0:4,0:4:9.03:0,9,146	0/0:4,0:4:3.01:0,3,48	./.	0/0:4,0:4:0.89:0,1,2	0/0:1,0:1:3.01:0,3,30	1/1:4,0:4:3.01:49,3,0	0/0:6,0:6:5.21:0,5,22
chr10	16415014	.	C	CA	1304.06	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=9.855;DP=596;FS=12.804;HRun=0;HaplotypeScore=75.9320;InbreedingCoeff=0.9418;MQ=81.04;MQ0=0;MQRankSum=-9.819;QD=21.38;ReadPosRankSum=0.012;VQSLOD=4.4471;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,132,1780	1/1:0,5:5:15.05:217,15,0	0/0:33,0:31:87.27:0,87,1188	0/0:26,0:26:76.12:0,76,1018	1/1:0,10:7:17.98:241,18,0	0/0:18,0:18:54.17:0,54,738	0/0:35,0:35:99:0,105,1410	0/0:27,0:27:78.25:0,78,1074	0/0:30,0:30:90.30:0,90,1259	1/1:0,7:3:9.03:135,9,0	1/1:0,6:4:11.97:144,12,0	0/0:31,0:31:90.30:0,90,1253	0/0:34,0:34:99:0,102,1384	0/0:26,0:26:72.23:0,72,990	0/0:31,0:31:93.28:0,93,1251	0/0:27,0:26:78.26:0,78,1088	1/1:0,5:5:15.05:224,15,0	0/0:16,0:15:45.15:0,45,626	0/0:31,0:31:90.25:0,90,1188	0/0:10,0:10:30.10:0,30,420	0/0:39,0:39:99:0,111,1500	0/0:20,0:20:60.20:0,60,839	0/0:13,0:13:39.12:0,39,527	0/0:33,0:33:99:0,99,1381	0/0:11,0:11:33.11:0,33,461	1/1:1,16:8:21.07:312,21,0	1/1:1,8:6:12.04:182,12,0	1/1:0,2:1:3.01:44,3,0
chr10	16415211	.	G	GC	5765.41	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=15.249;DP=577;FS=11.218;HRun=0;HaplotypeScore=66.9524;InbreedingCoeff=0.9969;MQ=79.58;MQ0=0;MQRankSum=-4.334;QD=39.76;ReadPosRankSum=2.337;VQSLOD=4.7462;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,105,1468	1/1:0,6:6:18.06:279,18,0	0/0:16,0:16:48.16:0,48,671	0/0:14,0:14:26.57:0,27,494	1/1:3,21:24:60.19:892,60,0	0/0:12,0:12:36.10:0,36,485	0/0:30,0:30:90.26:0,90,1216	0/0:24,0:24:72.24:0,72,1007	0/0:18,0:18:54.18:0,54,754	1/1:0,18:17:51.17:785,51,0	1/1:0,20:20:54.18:818,54,0	0/0:16,0:16:48.14:0,48,647	0/0:33,0:33:99:0,99,1367	0/0:20,0:20:60.20:0,60,839	0/0:27,0:27:81.25:0,81,1113	0/0:21,0:21:63.21:0,63,881	1/1:0,40:38:99:1577,105,0	0/0:15,0:15:42.10:0,42,565	0/0:19,0:19:57.19:0,57,797	0/0:24,0:24:72.23:0,72,990	0/0:30,0:30:90.30:0,90,1258	0/0:20,0:20:60.20:0,60,839	0/0:19,0:19:57.18:0,57,780	0/0:22,0:22:66.22:0,66,923	0/0:17,0:17:51.17:0,51,713	1/1:0,19:17:48.16:738,48,0	1/1:0,12:11:27.09:403,27,0	1/1:0,6:6:18.06:273,18,0
chr10	16418066	.	ATG	A	4184.16	PASS	AB=0.917;AC=27;AF=0.482;AN=56;BaseQRankSum=12.126;DP=1041;FS=2.444;HRun=0;HaplotypeScore=146.8110;InbreedingCoeff=0.1882;MQ=55.63;MQ0=16;MQRankSum=0.478;QD=6.12;ReadPosRankSum=2.925;VQSLOD=3.5500;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:71,3:73:13.30:13,0,1575	1/1:5,7:13:20.89:222,21,0	0/0:34,1:12:6.02:0,6,90	0/0:38,0:16:12.04:0,12,179	1/1:8,17:25:33.10:383,33,0	0/1:21,4:25:99:100,0,368	0/1:30,2:32:15.83:16,0,665	0/0:39,1:38:5.26:0,5,375	0/0:32,0:32:59.69:0,60,894	1/1:20,27:48:45.74:897,46,0	1/1:9,13:22:30.03:346,30,0	0/0:43,1:44:59.75:0,60,1308	0/0:42,1:43:68.38:0,68,1478	0/1:40,4:45:28.33:28,0,1037	0/1:45,1:46:10.84:11,0,1080	0/1:37,5:42:93.99:94,0,879	1/1:14,21:35:41.53:436,42,0	0/1:26,3:29:74.71:75,0,620	0/1:26,1:25:19.80:20,0,129	0/1:27,5:32:53.34:53,0,597	0/1:83,8:87:76.59:77,0,1595	0/0:37,1:39:17.70:0,18,868	0/0:23,1:28:30.98:0,31,611	0/0:57,1:58:39.97:0,40,1627	0/1:21,3:24:27.55:28,0,492	1/1:11,22:34:69.34:754,69,0	1/1:9,13:24:32.76:341,33,0	1/1:3,9:13:26.91:290,27,0
chr10	16418420	.	C	CAA	3139.47	PASS	AB=0.912;AC=42;AF=0.750;AN=56;BaseQRankSum=1.382;DP=659;FS=1.351;HRun=16;HaplotypeScore=127.0475;InbreedingCoeff=0.0008;MQ=68.97;MQ0=2;MQRankSum=-2.371;QD=4.94;ReadPosRankSum=-3.535;VQSLOD=-0.4243;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:32,0:35:47.95:48,0,105	0/0:6,0:9:4.59:0,5,64	0/1:15,0:15:5.46:5,0,56	0/1:11,0:8:0:1,0,0	1/1:22,0:29:20.85:130,21,0	1/1:11,10:27:1.55:146,2,0	1/1:9,10:21:9.63:79,10,0	1/1:17,10:29:42.52:393,43,0	1/1:5,1:20:3.01:31,3,0	1/1:15,2:29:21.60:157,22,0	0/1:13,0:22:42.85:54,0,43	0/1:26,0:26:14.87:50,0,15	1/1:5,9:15:8.96:90,9,0	1/1:20,0:20:34.24:344,34,0	0/1:20,0:24:8.94:9,0,92	0/1:18,0:20:15.17:15,0,135	1/1:10,0:31:16.60:60,17,0	0/0:12,0:14:2.26:0,2,58	1/1:11,0:15:24.68:164,25,0	1/1:15,17:36:46.06:432,46,0	0/1:11,3:17:13.28:65,0,13	1/1:9,13:29:23.94:162,24,0	1/1:12,1:35:22.27:143,22,0	1/1:7,1:25:13.74:104,14,0	1/1:15,16:33:1.20:221,1,0	1/1:15,0:23:16.80:117,17,0	0/1:28,0:30:20.67:204,0,21	0/1:12,0:13:19.21:66,0,19
chr10	16418762	.	CA	C	4007.93	PASS	AB=0.895;AC=17;AF=0.304;AN=56;BaseQRankSum=14.325;DP=676;FS=1.039;HRun=11;HaplotypeScore=74.7173;InbreedingCoeff=0.9075;MQ=73.55;MQ0=0;MQRankSum=-0.978;QD=18.38;ReadPosRankSum=1.719;VQSLOD=4.7453;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:96.24:0,96,1023	1/1:0,8:8:20.97:172,21,0	0/1:15,1:15:2.27:2,0,184	0/0:21,0:20:2.11:0,2,225	1/1:2,24:27:73.95:597,74,0	0/0:27,0:27:78.20:0,78,831	0/0:23,0:23:63.16:0,63,672	0/0:21,2:23:13.85:0,14,545	0/0:20,0:20:51.12:0,51,534	1/1:7,29:36:83.88:690,84,0	1/1:4,18:22:50.93:419,51,0	0/0:22,0:22:60.14:0,60,633	0/0:29,0:29:75.11:0,75,764	0/0:15,0:15:39.10:0,39,414	0/0:18,0:18:42.11:0,42,448	0/0:14,0:14:30.08:0,30,320	1/1:4,29:35:58.98:670,59,0	0/0:23,0:23:57.14:0,57,603	0/0:24,0:24:57.13:0,57,600	0/0:24,0:25:56.94:0,57,584	0/0:21,2:23:13.87:0,14,559	0/0:35,0:35:87.22:0,87,925	0/0:25,0:25:63.16:0,63,672	0/0:26,0:26:66.13:0,66,692	0/0:27,2:30:28.57:0,29,683	1/1:5,21:29:71.07:541,71,0	1/1:2,26:28:71.92:591,72,0	1/1:2,13:16:40.96:326,41,0
chr10	16419432	.	GGA	G	1074.15	PASS	AB=0.987;AC=26;AF=0.464;AN=56;BaseQRankSum=-6.574;DP=429;FS=41.744;HRun=0;HaplotypeScore=220.3608;InbreedingCoeff=-0.3292;MQ=45.97;MQ0=3;MQRankSum=0.438;QD=2.80;ReadPosRankSum=-2.571;VQSLOD=0.7225;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:11,0:10:10.07:18,0,10	0/0:9,0:9:11.59:0,12,39	0/0:9,0:5:3.20:0,3,24	0/0:12,0:8:3.39:0,3,36	1/1:20,2:23:3.35:107,3,0	0/0:9,0:8:6.40:0,6,17	0/1:16,0:15:6.47:49,0,6	0/1:28,0:27:33.73:79,0,34	0/1:16,1:16:17.27:40,0,17	0/1:12,2:13:6.24:107,0,6	0/1:14,0:14:22.84:23,0,24	0/1:23,0:23:25.24:25,0,34	0/1:17,0:16:19.29:28,0,19	0/1:27,0:26:9.73:87,0,10	0/1:35,0:35:51.64:84,0,52	0/1:16,0:16:0.96:1,0,51	0/1:9,0:9:4.55:19,0,5	0/0:3,0:3:5.81:0,6,43	1/1:16,0:16:0.15:96,0,0	0/1:15,0:15:19.35:54,0,19	1/1:7,0:7:7.57:65,8,0	0/1:17,0:17:33.96:63,0,34	0/1:19,0:19:5.33:70,0,5	0/0:2,0:2:3.73:0,4,16	0/1:15,0:15:8.63:37,0,9	1/1:16,1:14:3.12:79,3,0	0/1:17,1:18:10.75:76,0,11	0/1:9,0:9:3.68:18,0,4
chr10	16419440	.	CA	C	1189.91	PASS	AB=0.992;AC=45;AF=0.804;AN=56;BaseQRankSum=5.147;DP=430;FS=4.856;HRun=1;HaplotypeScore=213.5020;InbreedingCoeff=0.1334;MQ=42.00;MQ0=6;MQRankSum=-2.309;QD=3.00;ReadPosRankSum=6.020;VQSLOD=0.0546;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,0:11:2.87:15,3,0	1/1:9,0:9:5.52:27,6,0	0/0:10,0:5:7.76:0,8,112	0/1:11,0:7:0.74:1,0,123	0/0:23,1:23:3:0,3,25	0/1:11,0:10:0:0,0,0	0/1:16,0:14:12.38:12,0,14	0/1:28,0:22:63.02:183,0,63	1/1:15,0:13:5.91:38,6,0	1/1:12,2:13:2.65:133,3,0	1/1:14,0:14:2.97:20,3,0	1/1:23,1:24:8.93:63,9,0	0/1:17,1:16:6.90:44,0,7	1/1:28,0:27:8.34:41,8,0	1/1:33,1:34:20.36:125,20,0	1/1:16,0:16:0.81:100,1,0	1/1:11,0:11:6.05:27,6,0	1/1:3,0:3:8.78:53,9,0	0/1:14,0:11:38.86:44,0,39	1/1:16,2:18:4.02:29,4,0	0/1:6,0:5:0:0,0,0	1/1:18,0:17:8.34:44,8,0	1/1:19,0:19:2.50:9,2,0	1/1:3,0:2:2.74:12,3,0	1/1:14,1:15:4.15:15,4,0	1/1:15,0:12:28.85:151,29,0	1/1:15,0:15:10.59:47,11,0	1/1:9,0:9:2.96:88,3,0
chr10	16419441	.	AC	A	3509.20	PASS	AB=0.863;AC=51;AF=0.911;AN=56;BaseQRankSum=1.762;DP=440;FS=0.000;HRun=2;HaplotypeScore=215.5428;InbreedingCoeff=0.1122;MQ=41.44;MQ0=6;MQRankSum=-2.997;QD=7.98;ReadPosRankSum=1.858;VQSLOD=1.0008;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,1:11:3.01:33,3,0	1/1:8,1:9:6.01:64,6,0	0/1:9,1:5:28.79:29,0,64	0/1:8,2:6:55.48:88,0,55	0/1:15,9:23:0:0,0,0	0/1:9,2:10:0:0,0,0	1/1:14,3:15:3.48:38,3,0	1/1:12,15:20:49.06:563,49,0	1/1:9,6:13:6.02:74,6,0	1/1:10,5:14:31.12:334,31,0	1/1:9,5:14:3.01:37,3,0	1/1:16,7:23:9.71:117,10,0	1/1:13,5:16:11.82:121,12,0	1/1:15,13:27:9.02:95,9,0	1/1:22,11:33:21.06:248,21,0	1/1:10,7:17:20.98:242,21,0	1/1:9,2:11:8.94:82,9,0	1/1:3,1:4:9.03:115,9,0	1/1:11,3:11:21.04:222,21,0	1/1:19,3:22:5.95:47,6,0	0/1:6,0:5:0:0,0,0	1/1:18,2:19:9.02:95,9,0	1/1:12,7:19:2.99:24,3,0	1/1:3,0:2:3:29,3,0	1/1:9,7:16:5.98:50,6,0	1/1:9,6:12:31.58:370,32,0	1/1:14,4:18:17.14:146,17,0	1/1:4,5:9:21.06:244,21,0
chr10	16419442	.	C	CA	4378.13	PASS	AB=0.808;AC=51;AF=0.911;AN=56;BaseQRankSum=1.816;DP=493;FS=0.000;HRun=1;HaplotypeScore=261.5213;InbreedingCoeff=0.1201;MQ=40.10;MQ0=6;MQRankSum=-2.928;QD=8.88;ReadPosRankSum=1.414;VQSLOD=2.1541;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,10:13:2.41:34,2,0	1/1:2,5:7:6.02:92,6,0	0/1:10,0:5:28.79:29,0,60	0/1:10,0:6:55.60:88,0,56	0/1:19,8:26:0:0,0,0	0/1:2,8:9:0:0,0,0	1/1:8,13:18:3.01:37,3,0	1/1:21,7:20:54.64:666,55,0	1/1:8,7:13:8.39:83,8,0	1/1:13,4:16:38.51:407,39,0	1/1:10,7:16:3:43,3,0	1/1:11,12:23:10.86:102,11,0	1/1:8,12:18:12.04:169,12,0	1/1:15,13:27:8.84:130,9,0	1/1:15,20:35:20.88:239,21,0	1/1:8,9:17:20.99:221,21,0	1/1:6,7:13:13.78:132,14,0	1/1:4,2:6:12.01:134,12,0	1/1:11,3:10:26.78:311,27,0	1/1:15,6:21:5.82:74,6,0	0/1:6,4:9:0:0,0,0	1/1:16,14:28:8.63:132,9,0	1/1:11,11:22:3.01:47,3,0	1/1:5,3:7:2.96:47,3,0	1/1:15,7:22:6.02:86,6,0	1/1:11,8:16:43.79:553,44,0	1/1:7,10:17:17.78:232,18,0	1/1:8,4:12:23.99:289,24,0
chr10	16419477	.	AC	A	1661.42	PASS	AB=0.919;AC=46;AF=0.920;AN=50;BaseQRankSum=2.188;DP=451;FS=0.000;HRun=2;HaplotypeScore=258.2819;InbreedingCoeff=0.3693;MQ=36.44;MQ0=4;MQRankSum=-2.961;QD=4.16;ReadPosRankSum=3.422;VQSLOD=0.1882;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:16,1:16:2.94:18,3,0	1/1:6,2:8:8.84:58,9,0	0/1:11,0:3:2.48:2,0,4	0/0:10,0:5:9.45:0,9,65	0/1:21,5:25:0.02:0,0,0	./.	1/1:19,1:17:0.39:1,0,0	1/1:15,4:11:30.03:186,30,0	./.	1/1:17,4:20:46.37:290,46,0	1/1:12,2:13:2.69:21,3,0	1/1:14,4:18:10.32:40,10,0	1/1:17,3:18:5.90:36,6,0	1/1:18,1:19:11.78:79,12,0	1/1:21,7:28:16.37:75,16,0	1/1:6,5:11:16.62:85,17,0	1/1:12,2:14:14.64:87,15,0	1/1:5,1:6:3.18:35,3,0	1/1:8,1:8:14.76:69,15,0	1/1:18,1:18:5.81:43,6,0	./.	1/1:25,5:28:5.84:43,6,0	1/1:15,0:15:2.97:20,3,0	1/1:9,3:11:2.82:19,3,0	1/1:14,3:17:5.93:39,6,0	1/1:16,3:17:43.59:251,44,0	1/1:13,1:14:16.38:97,16,0	1/1:11,1:12:26.76:165,27,0
chr10	16419478	.	C	CA	2067.75	PASS	AB=0.802;AC=45;AF=0.900;AN=50;BaseQRankSum=3.413;DP=231;FS=1.714;HRun=1;HaplotypeScore=171.7112;InbreedingCoeff=0.3487;MQ=52.26;MQ0=3;MQRankSum=-3.534;QD=10.14;ReadPosRankSum=3.913;VQSLOD=1.9496;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,1:7:2.99:23,3,0	1/1:2,2:4:8.97:73,9,0	0/1:11,0:3:3:3,0,4	0/0:13,0:8:9.45:0,9,66	0/1:6,6:17:0:0,0,0	./.	0/1:1,2:4:0.01:0,0,0	1/1:4,0:9:26.65:215,27,0	./.	1/1:4,2:13:38.73:325,39,0	1/1:2,4:8:2.70:27,3,0	1/1:4,1:8:11.67:67,12,0	1/1:4,1:7:5.96:45,6,0	1/1:1,3:7:11.93:110,12,0	1/1:7,2:9:17.61:108,18,0	1/1:5,1:7:17.70:119,18,0	1/1:2,3:7:14.90:129,15,0	1/1:1,2:4:2.34:44,2,0	1/1:3,1:4:8.87:57,9,0	1/1:2,7:10:5.97:76,6,0	./.	1/1:5,11:18:5.48:63,5,0	1/1:0,5:5:3.01:40,3,0	1/1:3,2:9:3.19:29,3,0	1/1:3,8:11:6.02:74,6,0	1/1:3,2:10:29.74:249,30,0	1/1:1,4:5:8.95:88,9,0	1/1:1,3:8:23.82:203,24,0
chr10	16419480	.	AC	A	1406.70	PASS	AB=0.791;AC=43;AF=0.860;AN=50;BaseQRankSum=4.234;DP=231;FS=0.000;HRun=2;HaplotypeScore=174.5668;InbreedingCoeff=0.4237;MQ=54.87;MQ0=2;MQRankSum=-2.757;QD=7.29;ReadPosRankSum=4.465;VQSLOD=0.9489;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,2:7:2.90:16,3,0	1/1:3,1:4:7.77:35,8,0	0/0:11,0:3:2.84:0,3,9	0/0:13,0:9:12.93:0,13,70	0/1:12,5:17:0.02:0,0,0	./.	0/1:3,1:4:0.02:0,0,0	1/1:5,4:9:26.75:214,27,0	./.	1/1:8,5:13:38.82:331,39,0	1/1:6,2:8:1.93:7,2,0	1/1:3,5:8:9.38:33,9,0	1/1:5,2:7:3.01:30,3,0	1/1:6,1:7:10.32:72,10,0	1/1:1,8:9:14.61:54,15,0	1/1:2,5:7:15.58:66,16,0	1/1:6,1:7:14.08:84,14,0	0/1:3,1:4:0.90:9,0,1	1/1:4,1:4:8.94:81,9,0	1/1:10,1:10:3.92:12,4,0	./.	1/1:15,3:18:3.51:11,4,0	1/1:4,1:5:1.55:4,2,0	1/1:8,1:9:1.42:4,1,0	1/1:9,2:11:3.85:12,4,0	1/1:7,3:10:29.29:230,29,0	1/1:4,1:5:6.56:22,7,0	1/1:5,3:8:22.95:187,23,0
chr10	16419481	.	C	CA	1357.91	PASS	AB=0.813;AC=45;AF=0.900;AN=50;BaseQRankSum=3.720;DP=232;FS=0.000;HRun=1;HaplotypeScore=175.1987;InbreedingCoeff=0.3161;MQ=57.23;MQ0=2;MQRankSum=-1.786;QD=6.59;ReadPosRankSum=3.797;VQSLOD=0.7457;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,0:7:2.84:14,3,0	1/1:1,1:4:8.79:56,9,0	0/0:12,0:4:5.60:0,6,44	0/1:13,0:9:3.14:3,0,39	0/1:11,5:17:0:0,0,0	./.	0/1:2,2:4:0.01:0,0,0	1/1:9,0:9:25.22:145,25,0	./.	1/1:12,1:13:35.60:211,36,0	1/1:4,3:8:2.66:20,3,0	1/1:8,0:8:11.53:60,12,0	1/1:5,1:7:2.60:11,3,0	1/1:4,2:7:11.23:66,11,0	1/1:8,0:9:17.32:96,17,0	1/1:6,1:7:17.44:102,17,0	1/1:3,3:7:14.17:88,14,0	1/1:2,2:4:2.08:32,2,0	1/1:4,0:4:7.56:27,8,0	1/1:4,7:10:5.91:44,6,0	./.	1/1:5,9:18:5.35:35,5,0	1/1:1,4:5:2.99:23,3,0	1/1:5,2:9:3.09:17,3,0	1/1:2,6:11:5.96:46,6,0	1/1:8,1:10:27.38:159,27,0	1/1:1,4:5:8.87:64,9,0	1/1:7,1:8:22.78:140,23,0
chr10	16419483	.	AC	A	1081.49	PASS	AB=0.913;AC=46;AF=0.920;AN=50;BaseQRankSum=1.896;DP=233;FS=2.023;HRun=2;HaplotypeScore=177.3853;InbreedingCoeff=0.1043;MQ=63.96;MQ0=2;MQRankSum=-2.144;QD=4.94;ReadPosRankSum=2.638;VQSLOD=0.7782;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,0:7:1.82:5,2,0	1/1:4,0:4:8.16:45,8,0	1/1:12,0:5:5.16:26,5,0	0/1:14,0:11:25.09:25,0,35	0/1:14,3:17:0.02:0,0,0	./.	0/1:3,1:4:0.02:0,0,0	1/1:9,0:9:23.47:115,23,0	./.	1/1:12,1:13:34.48:163,34,0	1/1:8,0:8:2.69:21,3,0	0/1:8,0:8:6.74:10,0,7	1/1:6,1:7:2.80:13,3,0	1/1:5,2:7:11.52:71,12,0	1/1:9,0:9:10.21:42,10,0	1/1:7,0:7:11.89:46,12,0	1/1:7,0:7:13.04:62,13,0	1/1:3,1:4:4.24:21,4,0	1/1:5,0:4:6.57:29,7,0	1/1:9,2:10:5.80:43,6,0	./.	1/1:14,4:18:5.84:43,6,0	1/1:3,2:5:2.97:20,3,0	1/1:8,1:9:2.83:19,3,0	1/1:6,5:11:5.92:39,6,0	1/1:10,0:10:27.20:125,27,0	1/1:3,2:5:8.82:65,9,0	1/1:8,0:8:21.90:128,22,0
chr10	16419484	.	CCA	C	1368.91	PASS	AB=0.754;AC=47;AF=0.940;AN=50;BaseQRankSum=1.628;DP=228;FS=0.000;HRun=0;HaplotypeScore=177.6859;InbreedingCoeff=0.1085;MQ=64.57;MQ0=1;MQRankSum=-2.185;QD=6.37;ReadPosRankSum=2.011;VQSLOD=3.1300;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,2:7:2.92:17,3,0	1/1:2,2:4:8.81:57,9,0	1/1:8,0:5:8.27:45,8,0	0/1:8,0:11:35.31:35,0,64	0/1:9,5:16:0.28:0,0,0	./.	0/1:2,1:4:0:0,0,0	1/1:5,4:9:26.19:162,26,0	./.	1/1:8,5:13:36.88:202,37,0	1/1:3,4:8:2.98:24,3,0	1/1:4,4:8:1.54:41,2,0	1/1:4,2:6:2.84:14,3,0	1/1:6,1:7:11.39:57,11,0	1/1:1,8:9:17.39:102,17,0	1/1:1,6:7:17.40:102,17,0	1/1:3,3:7:16.12:77,16,0	1/1:2,2:4:9.18:49,9,0	1/1:3,1:3:6.25:32,6,0	1/1:4,1:10:5.26:24,5,0	./.	1/1:10,7:18:5.94:29,6,0	1/1:2,1:5:2.67:11,3,0	1/1:7,2:9:2.22:14,2,0	1/1:8,2:11:5.37:24,5,0	1/1:6,3:10:28.56:156,29,0	1/1:2,2:5:8.82:58,9,0	1/1:4,4:8:22.94:124,23,0
chr10	16419487	.	TTTA	T	2997.97	PASS	AB=0.731;AC=47;AF=0.904;AN=52;BaseQRankSum=5.204;DP=229;FS=2.765;HRun=0;HaplotypeScore=174.3629;InbreedingCoeff=0.2725;MQ=66.63;MQ0=1;MQRankSum=-5.113;QD=14.41;ReadPosRankSum=4.970;VQSLOD=3.1987;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,7:7:2.99:32,3,0	1/1:0,4:4:9.03:124,9,0	0/0:12,0:6:0.98:0,1,4	0/1:13,1:11:1.48:1,0,178	0/1:5,11:16:0.01:0,0,0	./.	0/1:2,2:4:0:0,0,0	1/1:0,9:9:27.07:334,27,0	1/1:0,5:5:2.90:16,3,0	1/1:1,12:13:39.08:445,39,0	1/1:1,7:8:3.01:46,3,0	1/1:1,7:8:11.40:109,11,0	1/1:1,5:6:3.01:31,3,0	1/1:2,5:7:12.01:128,12,0	1/1:0,9:9:18.05:214,18,0	1/1:0,7:7:18.05:219,18,0	1/1:2,6:8:17.96:188,18,0	1/1:1,3:4:6.64:90,7,0	1/1:0,3:3:8.51:78,9,0	1/1:7,3:10:5.76:71,6,0	./.	1/1:5,13:18:5.75:72,6,0	1/1:4,1:5:3.01:33,3,0	1/1:1,8:9:2.70:33,3,0	1/1:6,5:11:6.02:69,6,0	1/1:1,9:10:30.06:336,30,0	1/1:3,2:5:9.03:139,9,0	1/1:0,8:8:24.07:283,24,0
chr10	16419488	.	TTA	T	2381.13	PASS	AB=0.787;AC=49;AF=0.942;AN=52;BaseQRankSum=4.107;DP=234;FS=6.553;HRun=0;HaplotypeScore=175.8925;InbreedingCoeff=0.1003;MQ=68.15;MQ0=1;MQRankSum=-4.086;QD=10.58;ReadPosRankSum=3.699;VQSLOD=3.0664;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,0:7:2.99:26,3,0	1/1:4,0:4:9:84,9,0	1/1:12,0:7:1.98:11,2,0	0/1:13,1:11:19.04:19,0,178	0/1:11,5:16:0.29:0,0,0	./.	0/1:2,2:4:0:0,0,0	1/1:9,0:9:27.02:264,27,0	1/1:5,0:5:2.90:16,3,0	1/1:12,1:13:38.74:366,39,0	1/1:8,0:8:2.99:31,3,0	1/1:10,0:10:6.77:54,7,0	1/1:6,1:7:2.99:25,3,0	1/1:5,2:7:11.89:103,12,0	1/1:9,0:9:17.56:123,18,0	1/1:7,0:7:17.87:138,18,0	1/1:7,1:8:17.97:162,18,0	1/1:3,1:4:11.98:118,12,0	1/1:3,0:3:7.26:61,7,0	1/1:4,7:11:8.90:86,9,0	./.	1/1:13,5:18:6.24:59,6,0	1/1:1,4:5:3:30,3,0	1/1:8,1:9:2.35:25,2,0	1/1:5,6:11:6.01:58,6,0	1/1:9,1:10:29.90:269,30,0	1/1:2,3:5:9.01:107,9,0	1/1:8,0:8:23.99:237,24,0
chr10	16419494	.	T	TC	2130.37	PASS	AB=0.965;AC=47;AF=0.904;AN=52;BaseQRankSum=3.867;DP=266;FS=11.978;HRun=2;HaplotypeScore=182.8370;InbreedingCoeff=0.3321;MQ=67.79;MQ0=1;MQRankSum=-4.106;QD=8.84;ReadPosRankSum=2.179;VQSLOD=0.1302;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,0:7:2.94:18,3,0	1/1:5,0:5:11.88:84,12,0	0/0:12,0:6:10.17:0,10,60	0/1:15,0:13:34.30:34,0,118	0/1:15,2:17:0:0,0,0	./.	0/1:4,0:4:0.01:0,0,0	1/1:12,0:12:32.50:225,32,0	1/1:6,0:6:3:25,3,0	1/1:12,1:13:37.76:272,38,0	1/1:9,0:9:2.68:21,3,0	1/1:9,1:10:11.51:72,12,0	1/1:8,0:8:9:79,9,0	1/1:8,0:8:11.81:79,12,0	1/1:9,0:9:16.78:93,17,0	1/1:9,0:9:17.48:105,17,0	1/1:10,0:10:20.67:151,21,0	1/1:6,0:6:9.40:69,9,0	1/1:5,0:5:5.99:49,6,0	1/1:12,0:12:11.99:107,12,0	./.	1/1:18,1:19:5.41:40,5,0	1/1:9,0:9:8.98:72,9,0	1/1:10,0:10:2.64:17,3,0	1/1:11,1:12:11.94:96,12,0	1/1:11,0:11:32.72:240,33,0	1/1:6,0:6:11.88:87,12,0	1/1:9,0:9:26.83:203,27,0
chr10	16419495	.	C	CA	5443.93	PASS	AB=0.674;AC=47;AF=0.904;AN=52;BaseQRankSum=2.680;DP=342;FS=17.849;HRun=0;HaplotypeScore=200.5994;InbreedingCoeff=0.2202;MQ=66.03;MQ0=1;MQRankSum=-4.359;QD=17.56;ReadPosRankSum=1.521;VQSLOD=3.9472;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,7:11:3.01:37,3,0	1/1:3,5:8:15.05:212,15,0	0/0:14,0:9:5.89:0,6,61	0/1:11,4:13:99:141,0,147	1/1:6,14:20:3:25,3,0	./.	0/1:2,4:6:0.01:0,0,0	1/1:10,10:20:57.14:808,57,0	1/1:3,5:8:3.01:43,3,0	1/1:2,12:14:42.12:563,42,0	1/1:5,8:13:5.70:64,6,0	1/1:5,8:13:12.03:129,12,0	1/1:1,8:9:9.03:137,9,0	1/1:2,9:11:12.03:147,12,0	1/1:3,9:12:18.04:203,18,0	1/1:3,9:12:18.05:216,18,0	1/1:1,10:11:30.01:368,30,0	1/1:2,4:6:12.01:152,12,0	1/1:7,3:10:18.06:279,18,0	1/1:4,11:15:12.04:181,12,0	./.	1/1:5,16:22:5.48:76,5,0	0/1:5,7:12:10.89:127,0,11	1/1:4,9:13:2.72:36,3,0	1/1:4,10:14:15.04:206,15,0	1/1:3,11:14:42.14:604,42,0	1/1:7,5:11:21.02:309,21,0	1/1:0,9:9:27.09:382,27,0
chr10	16420096	.	AAT	A	1096.12	PASS	AC=14;AF=0.304;AN=46;BaseQRankSum=7.324;DP=151;FS=22.301;HRun=0;HaplotypeScore=25.9913;InbreedingCoeff=0.6637;MQ=82.85;MQ0=0;MQRankSum=-0.613;QD=27.40;ReadPosRankSum=1.580;VQSLOD=1.9026;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:21.07:0,21,348	1/1:0,2:2:6.02:76,6,0	0/0:4,0:4:1.28:0,1,4	0/0:14,0:7:0.81:0,1,4	1/1:0,4:4:12.04:152,12,0	0/0:5,0:5:9.02:0,9,125	./.	0/0:30,0:30:60.16:0,60,874	0/0:2,0:2:2.99:0,3,24	./.	1/1:0,1:1:3.01:38,3,0	0/0:2,0:2:6:0,6,74	0/0:6,0:6:15.05:0,15,249	./.	0/0:2,0:2:6.02:0,6,99	0/0:2,0:2:6.02:0,6,100	1/1:0,8:8:21.07:266,21,0	0/0:19,0:19:48.13:0,48,747	0/0:7,0:7:18.01:0,18,268	0/0:2,0:2:6.01:0,6,75	0/0:1,0:1:3.01:0,3,47	0/0:1,0:1:3.01:0,3,50	./.	./.	0/0:4,0:4:12.03:0,12,173	1/1:0,5:5:15.05:190,15,0	1/1:3,2:5:6.02:76,6,0	1/1:0,15:15:36.12:456,36,0
chr10	16424517	.	C	CT	1361.49	PASS	AB=1.000;AC=43;AF=0.768;AN=56;BaseQRankSum=1.418;DP=174;FS=0.000;HRun=1;HaplotypeScore=67.3532;InbreedingCoeff=0.5875;MQ=56.45;MQ0=1;MQRankSum=-3.020;QD=9.79;ReadPosRankSum=-0.731;VQSLOD=0.8404;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:20.60:0,21,130	1/1:5,1:6:14.69:103,15,0	0/1:13,0:9:32.49:32,0,44	0/0:6,0:3:5.23:0,5,39	1/1:9,0:9:9.03:121,9,0	1/1:1,1:2:5.50:42,6,0	1/1:3,0:3:3.74:12,4,0	1/1:6,0:5:8.20:47,8,0	1/1:6,2:8:17.03:140,17,0	1/1:2,0:2:5.58:33,6,0	1/1:8,0:9:5.45:29,5,0	0/0:3,0:3:8.87:0,9,62	1/1:6,2:8:9.50:66,10,0	1/1:9,0:9:21.65:172,22,0	0/0:7,0:7:17.69:0,18,126	0/0:8,0:8:20.76:0,21,153	1/1:1,1:2:3.01:41,3,0	0/0:2,0:2:2.53:0,3,16	1/1:4,0:4:11.22:65,11,0	1/1:3,0:3:7.88:55,8,0	1/1:7,0:8:8.32:65,8,0	1/1:9,0:9:6.15:50,6,0	1/1:6,1:7:12.08:81,12,0	1/1:4,1:5:8.94:78,9,0	1/1:8,1:9:7.20:54,7,0	1/1:2,0:2:4.99:18,5,0	1/1:7,3:10:20.70:130,21,0	1/1:4,1:5:13.03:99,13,0
chr10	16430773	.	CA	C	3769.14	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=13.153;DP=494;FS=2.300;HRun=8;HaplotypeScore=51.8315;InbreedingCoeff=0.9011;MQ=76.15;MQ0=0;MQRankSum=-0.884;QD=24.32;ReadPosRankSum=-0.075;VQSLOD=4.1901;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:93.26:0,93,1099	1/1:1,6:7:15.02:145,15,0	0/1:12,0:12:25.58:26,0,123	0/0:11,0:10:9:0,9,99	1/1:2,19:21:54.05:513,54,0	0/0:20,0:20:54.10:0,54,634	0/0:12,0:12:33.10:0,33,399	0/0:29,0:29:66.19:0,66,779	0/0:10,0:10:27.08:0,27,326	1/1:0,21:21:63.10:608,63,0	1/1:0,14:14:42.07:406,42,0	0/0:16,0:16:48.15:0,48,580	0/0:20,0:20:54.17:0,54,652	0/0:9,0:9:24.07:0,24,290	0/0:23,0:24:69.20:0,69,821	0/0:18,0:18:48.13:0,48,568	1/1:1,19:20:54.06:514,54,0	0/0:34,0:34:90.22:0,90,1047	0/0:17,0:17:36.10:0,36,425	0/0:19,0:19:48.13:0,48,568	0/0:8,0:8:18.04:0,18,206	0/0:11,0:11:30.09:0,30,362	0/0:11,0:11:30.08:0,30,350	0/0:9,0:9:21.06:0,21,253	0/0:27,0:27:81.25:0,81,978	1/1:1,18:19:54.06:516,54,0	1/1:3,29:32:84.13:811,84,0	1/1:0,8:8:24.04:232,24,0
chr10	16430951	.	T	TAC	1208.27	PASS	AB=0.743;AC=11;AF=0.212;AN=52;BaseQRankSum=-5.734;DP=436;FS=0.701;HRun=0;HaplotypeScore=73.4530;InbreedingCoeff=0.0979;MQ=69.66;MQ0=10;MQRankSum=-0.699;QD=8.82;ReadPosRankSum=-1.840;VQSLOD=2.8562;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:38.96:0,39,393	0/1:2,2:4:27.15:39,0,27	./.	./.	0/1:9,7:16:31.21:121,0,31	0/0:14,0:14:26.85:0,27,269	0/0:18,0:19:17.88:0,18,179	0/0:26,0:26:15.91:0,16,160	0/0:6,0:7:14.83:0,15,145	0/1:8,4:15:45.28:195,0,45	1/1:7,5:13:12.04:178,12,0	0/1:6,1:7:33.14:33,0,87	0/0:13,0:14:29.88:0,30,294	0/0:4,0:4:8.87:0,9,88	0/0:7,0:7:9.01:0,9,91	0/0:11,0:12:26.89:0,27,270	0/1:15,16:31:72.16:371,0,72	0/1:17,1:19:15.10:15,0,268	0/0:13,0:13:23.87:0,24,224	0/0:15,0:15:14.99:0,15,145	0/0:31,0:31:27.05:0,27,289	0/0:5,0:4:3.01:0,3,33	0/0:4,0:4:3.01:0,3,33	0/0:16,0:16:21.05:0,21,232	0/0:12,0:13:26.88:0,27,260	1/1:4,5:10:18.06:259,18,0	0/1:9,8:21:99:148,0,128	0/0:7,0:6:1.07:0,1,89
chr10	16431849	.	TA	T	1063.30	PASS	AB=0.836;AC=27;AF=0.482;AN=56;BaseQRankSum=-1.087;DP=376;FS=22.186;HRun=15;HaplotypeScore=66.6056;InbreedingCoeff=0.6414;MQ=71.73;MQ0=3;MQRankSum=0.038;QD=6.48;ReadPosRankSum=0.171;VQSLOD=0.7133;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:13,1:14:10.69:0,11,208	0/0:2,0:4:8.65:0,9,48	0/1:22,0:13:7.21:7,0,33	0/0:19,0:8:4.22:0,4,29	0/0:17,1:27:40.47:0,40,241	1/1:3,10:13:26.56:173,27,0	1/1:1,3:4:8.86:58,9,0	1/1:4,8:16:25.76:139,26,0	1/1:1,3:8:9.93:50,10,0	0/0:6,0:15:29.21:0,29,186	0/0:8,1:15:8.54:0,9,148	0/0:13,1:15:23.75:0,24,185	0/1:5,5:10:31.85:59,0,32	1/1:1,7:8:11.75:77,12,0	0/1:13,3:16:36.83:37,0,78	0/0:14,2:16:16.77:0,17,268	0/0:14,0:20:32.27:0,32,224	0/0:11,2:13:6.94:0,7,168	1/1:6,6:13:19.60:121,20,0	1/1:4,12:18:33.51:204,34,0	1/1:0,4:4:5.89:38,6,0	1/1:3,0:4:4.92:24,5,0	1/1:4,6:10:19.71:121,20,0	1/1:0,3:3:5.91:38,6,0	1/1:2,11:14:19.71:121,20,0	0/0:5,1:13:2.16:0,2,76	0/0:10,1:21:13.06:0,13,185	0/0:8,0:20:28.57:0,29,153
chr10	16433901	.	A	AC	11578.42	PASS	AB=0.778;AC=55;AF=0.982;AN=56;BaseQRankSum=-4.621;DP=367;FS=12.251;HRun=1;HaplotypeScore=145.7602;InbreedingCoeff=-0.0295;MQ=47.78;MQ0=0;MQRankSum=-1.813;QD=31.55;ReadPosRankSum=3.541;VQSLOD=3.1406;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,23:29:53.50:757,54,0	1/1:0,3:3:9.03:135,9,0	1/1:3,1:4:5.41:92,5,0	0/1:5,2:7:19.97:130,0,20	1/1:2,19:21:35.06:487,35,0	1/1:1,19:20:43.75:753,44,0	1/1:5,14:19:43.78:534,44,0	1/1:4,16:20:51.16:742,51,0	1/1:3,10:13:23.97:310,24,0	1/1:0,21:21:63.21:943,63,0	1/1:1,11:12:27.05:379,27,0	1/1:0,14:14:29.95:345,30,0	1/1:1,8:9:24.04:334,24,0	1/1:4,17:21:45.02:597,45,0	1/1:1,15:16:36.08:513,36,0	1/1:2,13:15:35.96:464,36,0	1/1:2,10:12:30.07:424,30,0	1/1:0,7:7:18.02:245,18,0	1/1:2,7:9:27.09:405,27,0	1/1:0,8:8:21.06:313,21,0	1/1:3,11:14:22.83:295,23,0	1/1:0,6:6:15.05:224,15,0	1/1:0,11:11:15.05:218,15,0	1/1:1,9:10:11.74:154,12,0	1/1:0,14:14:36.12:538,36,0	1/1:3,8:11:23.34:332,23,0	1/1:0,18:18:54.14:783,54,0	1/1:0,3:3:9.03:135,9,0
chr10	16436372	.	T	TA	4722.55	PASS	AB=0.754;AC=25;AF=0.446;AN=56;BaseQRankSum=-9.711;DP=669;FS=3.095;HRun=11;HaplotypeScore=108.2133;InbreedingCoeff=0.5202;MQ=71.54;MQ0=6;MQRankSum=4.342;QD=13.01;ReadPosRankSum=-0.725;VQSLOD=4.5575;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:23,4:30:59.07:59,0,287	0/1:11,0:11:9.57:10,0,43	0/1:25,0:19:11.05:11,0,52	0/0:26,0:21:9.23:0,9,194	0/0:25,0:26:42.17:0,42,256	0/1:4,15:20:1.55:335,0,2	0/1:2,13:15:5.20:134,0,5	1/1:13,9:22:4.22:269,4,0	1/1:9,17:27:44.92:440,45,0	0/0:30,0:30:53.83:0,54,317	0/0:24,0:24:45.76:0,46,215	0/0:31,0:32:76.65:0,77,578	1/1:4,15:19:12.02:279,12,0	1/1:7,13:20:12.80:303,13,0	0/0:25,0:25:58.74:0,59,444	0/0:34,0:36:69.76:0,70,522	0/0:28,0:28:37.41:0,37,199	0/0:15,0:15:35.86:0,36,279	1/1:10,12:21:2.08:338,2,0	1/1:4,20:25:53.86:509,54,0	1/1:4,14:19:17.19:207,17,0	0/1:10,10:21:25.03:275,0,25	1/1:6,27:33:48.72:654,49,0	1/1:6,16:23:24.06:403,24,0	0/1:13,15:28:0.85:497,0,1	0/0:22,0:22:41.78:0,42,216	0/0:30,0:30:49.21:0,49,253	0/0:10,0:9:15.43:0,15,76
chr10	16436377	.	AAAAAAAC	A	5280.69	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=2.514;DP=653;FS=1.370;HRun=0;HaplotypeScore=168.5221;InbreedingCoeff=0.9834;MQ=68.54;MQ0=6;MQRankSum=-8.351;QD=28.24;ReadPosRankSum=-0.083;VQSLOD=4.7555;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:30:48.15:0,48,1379	1/1:4,8:12:15.05:333,15,0	0/0:23,0:15:16.25:0,16,319	0/0:26,0:19:18.31:0,18,356	1/1:14,11:25:39.80:567,40,0	0/0:20,0:20:48.16:0,48,1332	0/0:14,0:14:12.04:0,12,371	0/0:23,0:23:33.11:0,33,913	0/0:22,0:22:42.14:0,42,1217	1/1:9,28:36:74.96:1005,75,0	1/1:6,17:23:51.03:939,51,0	0/0:29,0:29:81.24:0,81,2593	0/0:19,0:19:35.93:0,36,975	0/0:17,0:18:42.13:0,42,1153	0/0:26,0:25:63.08:0,63,1697	0/0:35,0:35:78.26:0,78,2601	1/1:11,16:27:30.06:570,30,0	0/0:13,0:13:30.05:0,30,945	0/0:22,0:20:41.82:0,42,1190	0/0:22,0:22:51.18:0,51,1607	0/0:19,0:19:33.11:0,33,950	0/0:18,0:18:39.13:0,39,1256	0/0:33,0:32:69.52:0,70,1856	0/0:22,0:22:37.87:0,38,1014	0/0:31,0:30:81.26:0,81,2352	1/1:9,16:25:51.04:870,51,0	1/1:10,18:28:32.22:730,32,0	1/1:5,5:9:12.04:266,12,0
chr10	16436894	.	TACACACACACACACACACAC	T	1666.60	PASS	AB=0.778;AC=22;AF=0.393;AN=56;BaseQRankSum=4.744;DP=768;FS=2.055;HRun=0;HaplotypeScore=328.1176;InbreedingCoeff=0.5193;MQ=48.13;MQ0=30;MQRankSum=-4.435;QD=4.69;ReadPosRankSum=-6.138;VQSLOD=0.9701;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:21:18.90:0,19,1253	0/0:11,0:13:20.43:0,20,287	0/0:46,0:15:0:0,0,0	0/0:41,0:14:0:0,0,0	0/0:16,0:21:7.83:0,8,164	0/1:6,7:12:17.97:20,0,18	1/1:21,0:20:12.04:149,12,0	1/1:28,7:35:3.73:272,4,0	1/1:13,1:14:23.89:486,24,0	0/0:27,0:37:46.56:0,47,1275	0/0:13,0:17:17.58:0,18,338	0/0:30,0:30:18.42:0,18,964	1/1:21,15:38:11.45:94,11,0	0/1:22,11:33:34.09:34,0,36	0/0:40,0:38:37.47:0,37,2170	0/0:25,0:23:20.20:0,20,713	0/0:18,0:25:4.01:0,4,100	0/0:28,0:26:37.01:0,37,1567	1/1:14,3:17:6.66:228,7,0	1/1:16,12:28:15.91:144,16,0	0/1:36,0:32:99:155,0,127	1/1:27,14:39:7.04:94,7,0	1/1:13,10:23:12.37:102,12,0	1/1:19,8:25:4.73:41,5,0	0/1:16,11:27:14.75:35,0,15	0/0:23,0:34:31.02:0,31,1023	0/0:10,0:16:6.75:0,7,428	0/0:11,0:11:5.93:0,6,148
chr10	16441676	.	TACACAC	T	2371.62	PASS	AB=0.703;AC=19;AF=0.365;AN=52;BaseQRankSum=5.311;DP=525;FS=27.661;HRun=0;HaplotypeScore=123.6463;InbreedingCoeff=0.7996;MQ=56.63;MQ0=10;MQRankSum=-6.391;QD=12.68;ReadPosRankSum=-0.146;VQSLOD=1.0270;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:12.04:0,12,198	1/1:7,0:7:4.74:22,5,0	./.	./.	0/1:15,9:26:30.65:187,0,31	1/1:12,11:25:29.99:488,30,0	1/1:14,6:21:9.03:163,9,0	0/0:19,0:19:20:0,20,185	0/0:23,0:24:35.31:0,35,958	1/1:11,5:18:21.04:329,21,0	1/1:16,10:26:18.45:321,18,0	0/0:13,0:22:18.06:0,18,455	0/0:18,0:19:30.10:0,30,821	0/0:11,0:15:24.08:0,24,540	0/0:17,0:21:24.06:0,24,498	0/0:10,0:13:18.06:0,18,479	1/1:11,4:15:6.02:121,6,0	0/0:18,0:24:18.06:0,18,496	0/0:15,0:15:12.04:0,12,243	0/0:18,0:18:12.04:0,12,281	0/0:14,0:17:18.06:0,18,432	0/0:14,0:14:17.93:0,18,409	0/0:14,0:16:27.07:0,27,567	0/0:22,0:22:33.11:0,33,902	0/0:13,0:12:18.04:0,18,488	1/1:10,10:22:28.60:431,29,0	1/1:8,9:18:3.78:397,4,0	1/1:4,4:9:6.02:103,6,0
chr10	16449387	.	GATATATATATATATATATATATATATATATATATATATATATAT	G	859.17	PASS	AC=10;AF=0.357;AN=28;BaseQRankSum=-0.141;DP=153;FS=6.435;HRun=0;HaplotypeScore=143.3141;InbreedingCoeff=0.4587;MQ=64.14;MQ0=1;MQRankSum=0.352;QD=15.62;ReadPosRankSum=0.141;VQSLOD=1.5636;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:6,0:4:3.01:0,3,44	0/0:17,0:7:8.05:0,8,105	./.	1/1:2,5:7:3.01:330,3,0	./.	1/1:24,0:24:9.02:186,9,0	1/1:5,1:6:3.01:330,3,0	0/0:5,0:5:6.02:0,6,282	./.	./.	1/1:8,0:8:3.01:112,3,0	./.	./.	./.	0/0:9,0:9:9.03:0,9,678	0/0:1,0:1:3.01:0,3,333	1/1:10,0:10:1.55:4,2,0	./.	./.	./.	./.	0/0:9,0:9:0.47:0,0,1	./.	0/0:5,0:5:6.02:0,6,451	0/0:7,0:7:6.02:0,6,469	0/0:2,0:2:3.01:0,3,207
chr10	16449430	.	A	AGG	128.45	PASS	AB=1.000;AC=11;AF=0.393;AN=28;BaseQRankSum=1.774;DP=55;FS=0.000;HRun=0;HaplotypeScore=21.3168;InbreedingCoeff=0.4157;MQ=78.96;MQ0=3;MQRankSum=2.135;QD=5.35;ReadPosRankSum=-2.186;VQSLOD=1.7604;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:4,0:3:3.90:0,4,44	0/1:13,0:3:5.99:6,0,18	./.	0/0:5,0:5:2.84:0,3,14	./.	1/1:1,2:4:9.02:121,9,0	0/0:1,0:1:2.84:0,3,14	0/0:2,0:2:6.02:0,6,93	0/0:2,0:2:2.97:0,3,20	./.	./.	./.	./.	./.	0/0:6,0:6:11.79:0,12,169	0/0:4,0:4:6.02:0,6,93	1/1:2,0:2:6.01:70,6,0	1/1:2,0:2:2.98:21,3,0	1/1:1,0:1:2.74:12,3,0	./.	./.	./.	1/1:1,0:1:2.04:6,2,0	./.	./.	0/0:6,0:5:12.04:0,12,167
chr10	16449658	.	T	TTG	1086.93	PASS	AB=0.972;AC=25;AF=0.481;AN=52;BaseQRankSum=-5.426;DP=371;FS=11.421;HRun=0;HaplotypeScore=96.8777;InbreedingCoeff=0.1391;MQ=47.64;MQ0=7;MQRankSum=2.620;QD=4.73;ReadPosRankSum=2.362;VQSLOD=1.5741;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:14:2.99:24,3,0	1/1:2,2:4:3.01:44,3,0	./.	./.	1/1:12,1:13:6:68,6,0	0/1:13,0:13:23.09:51,0,23	0/1:11,0:11:5.08:5,0,91	0/1:22,0:21:6.20:6,0,29	0/0:10,0:10:6.43:0,6,46	1/1:18,2:19:0.46:210,0,0	1/1:10,0:10:11.97:106,12,0	0/1:9,0:9:12.21:12,0,39	0/1:11,1:12:51.24:54,0,51	0/0:12,0:12:11.83:0,12,86	0/0:15,0:15:26.66:0,27,192	0/0:11,0:11:14.93:0,15,118	0/1:18,5:23:20.44:182,0,20	0/0:16,0:16:3.77:0,4,20	0/1:19,0:18:10.04:22,0,10	0/1:11,0:11:8.97:9,0,85	0/0:9,0:7:2.94:0,3,18	0/0:13,0:13:5.61:0,6,56	0/0:16,0:17:23.55:0,24,162	0/1:11,0:11:16.97:17,0,19	0/0:13,0:13:11.43:0,11,78	1/1:21,0:21:9.63:145,10,0	1/1:4,6:11:18.05:249,18,0	1/1:6,0:5:7.21:47,7,0
chr10	16449697	.	TGC	T	1306.96	PASS	AB=0.932;AC=21;AF=0.375;AN=56;BaseQRankSum=4.306;DP=340;FS=8.078;HRun=0;HaplotypeScore=145.7936;InbreedingCoeff=-0.3537;MQ=42.62;MQ0=7;MQRankSum=-3.578;QD=5.01;ReadPosRankSum=0.381;VQSLOD=2.7438;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:2.93:0,3,19	0/0:4,0:4:2.04:0,2,6	0/1:11,0:2:0.89:1,0,12	0/0:11,0:3:8.70:0,9,84	0/0:7,0:7:5.42:0,5,26	0/1:13,1:14:34.32:34,0,43	0/1:13,1:14:13.08:13,0,109	1/1:24,0:22:35.55:349,36,0	0/1:7,1:8:21.29:30,0,21	0/1:15,0:14:32.02:32,0,40	0/0:10,0:10:8.89:0,9,64	0/1:5,3:8:22.81:104,0,23	0/1:11,1:12:52.54:63,0,53	0/1:10,1:11:40.76:52,0,41	0/1:17,0:16:53.86:54,0,123	0/1:10,1:11:67.69:68,0,82	0/1:19,1:20:54.63:55,0,82	0/1:11,1:12:20.07:102,0,20	1/1:15,0:14:6.88:134,7,0	0/0:8,0:8:14.97:0,15,125	0/0:8,0:6:3:0,3,27	0/1:6,1:7:30.34:30,0,58	0/1:13,1:14:82.97:83,0,99	0/0:10,0:10:2.95:0,3,27	0/1:10,1:11:32.42:32,0,61	0/1:19,0:19:96.09:119,0,96	0/1:18,0:18:2.05:105,0,2	0/0:4,0:3:2.90:0,3,17
chr10	16450876	.	A	AT	7116.76	PASS	AB=0.826;AC=27;AF=0.482;AN=56;BaseQRankSum=-6.984;DP=730;FS=9.605;HRun=10;HaplotypeScore=103.5284;InbreedingCoeff=0.7563;MQ=71.30;MQ0=0;MQRankSum=0.469;QD=18.83;ReadPosRankSum=-1.292;VQSLOD=4.0315;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:48,1:49:78.77:0,79,844	0/0:3,0:18:30.55:0,31,88	0/0:18,0:19:34.22:0,34,266	0/1:15,0:15:7.59:8,0,105	0/0:7,0:31:46.83:0,47,135	1/1:4,26:30:69.17:736,69,0	0/1:3,10:13:19.21:226,0,19	1/1:12,24:36:44.47:653,44,0	1/1:2,10:12:30.08:320,30,0	0/0:4,0:29:50.92:0,51,147	0/0:2,0:26:48.89:0,49,141	0/0:20,0:20:44.94:0,45,369	1/1:5,30:35:69.17:736,69,0	1/1:6,17:23:39.10:416,39,0	0/0:37,0:37:89.80:0,90,729	0/1:28,3:31:21.08:21,0,464	0/0:3,0:35:65.18:0,65,188	0/0:23,0:23:59.92:0,60,492	1/1:11,14:26:4.69:445,5,0	1/1:5,41:46:95.56:1189,96,0	1/1:1,12:13:14.45:359,14,0	1/1:5,13:20:21.05:369,21,0	1/1:7,17:25:4.68:445,5,0	1/1:3,16:21:19.47:432,19,0	1/1:5,25:31:74.86:764,75,0	0/0:2,0:29:53.43:0,53,154	0/0:2,0:22:36.65:0,37,106	0/0:1,0:13:24.44:0,24,71
chr10	16452508	.	AATAT	A	2856.65	PASS	AB=0.778;AC=28;AF=0.500;AN=56;BaseQRankSum=-4.296;DP=229;FS=0.000;HRun=0;HaplotypeScore=45.9712;InbreedingCoeff=0.6235;MQ=81.82;MQ0=4;MQRankSum=-3.006;QD=21.64;ReadPosRankSum=-3.435;VQSLOD=2.3477;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:8:18.06:0,18,451	0/0:0,0:3:8.39:0,8,38	0/0:6,0:2:2.84:0,3,14	0/1:26,0:15:10.50:11,0,92	0/0:3,0:5:5.60:0,6,25	1/1:4,7:11:18.06:307,18,0	1/1:0,4:4:12.04:193,12,0	1/1:13,27:40:81.20:1213,81,0	1/1:0,2:2:3.01:51,3,0	0/0:2,0:4:5.60:0,6,25	0/0:3,0:9:16.95:0,17,99	0/0:1,0:4:11.40:0,11,113	1/1:4,3:7:9:123,9,0	1/1:0,3:3:6.02:102,6,0	0/0:6,0:6:18.06:0,18,451	0/0:2,0:2:3.01:0,3,75	0/0:2,0:13:27.98:0,28,125	0/0:8,0:8:18.06:0,18,451	1/1:4,6:10:18.06:307,18,0	1/1:0,5:5:15.05:256,15,0	1/1:1,1:2:3.01:51,3,0	1/1:0,1:1:3.01:51,3,0	1/1:0,1:1:3.01:51,3,0	1/1:1,3:4:9.03:153,9,0	1/1:1,5:6:9.03:153,9,0	0/0:5,0:12:22.79:0,23,176	0/1:2,1:10:28.68:29,0,65	0/0:3,0:17:36.37:0,36,163
chr10	16453404	.	C	CT	16513.64	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-18.527;DP=791;FS=2.229;HRun=0;HaplotypeScore=71.1923;InbreedingCoeff=0.9998;MQ=76.11;MQ0=0;MQRankSum=-2.303;QD=41.70;ReadPosRankSum=2.467;VQSLOD=5.6795;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,132,1798	0/0:15,0:15:42.13:0,42,571	0/0:17,0:18:43.86:0,44,479	0/0:16,0:15:42.13:0,42,543	0/0:26,0:26:72.24:0,72,1002	1/1:0,15:15:30.10:479,30,0	1/1:0,33:33:87.30:1390,87,0	1/1:1,26:27:78.27:1245,78,0	1/1:0,27:28:63.21:989,63,0	0/0:25,0:25:72.24:0,72,991	0/0:25,0:25:75.25:0,75,1046	0/0:39,0:39:99:0,117,1628	1/1:0,35:35:93.32:1485,93,0	1/1:0,36:36:90.31:1439,90,0	0/0:28,0:28:78.25:0,78,1073	0/0:31,1:32:45.37:0,45,1209	0/0:40,0:40:99:0,117,1612	0/0:25,0:25:75.23:0,75,1029	1/1:0,24:24:72.25:1145,72,0	1/1:0,25:25:69.24:1103,69,0	1/1:0,51:51:99:2254,141,0	1/1:0,28:28:66.20:1054,66,0	1/1:0,26:26:72.25:1151,72,0	1/1:1,46:47:99:1965,123,0	1/1:1,20:21:51.17:815,51,0	0/0:28,0:28:84.24:0,84,1151	0/0:24,0:24:63.21:0,63,870	0/0:10,0:10:30.10:0,30,419
chr10	16453611	.	ACCCCTCT	A	18674.57	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=20.520;DP=717;FS=1.669;HRun=0;HaplotypeScore=194.8803;InbreedingCoeff=0.9978;MQ=78.46;MQ0=0;MQRankSum=-20.106;QD=62.88;ReadPosRankSum=1.426;VQSLOD=5.0293;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,144,5772	0/0:5,0:5:15.05:0,15,625	0/0:21,0:21:63.22:0,63,2525	0/0:23,0:23:49.99:0,50,2380	0/0:24,0:24:72.25:0,72,3016	1/1:0,15:15:39.13:1089,39,0	1/1:0,23:23:57.20:1566,57,0	1/1:0,26:26:75.24:1962,75,0	1/1:0,22:22:60.21:1605,60,0	0/0:30,0:30:87.30:0,87,3613	0/0:22,0:22:66.23:0,66,2623	0/0:45,0:45:99:0,135,5418	1/1:0,28:29:81.28:2236,81,0	1/1:0,25:25:66.23:1843,66,0	0/0:50,0:50:99:0,148,6017	0/0:26,0:26:78.25:0,78,3143	0/0:23,0:23:69.24:0,69,2873	0/0:22,0:22:66.23:0,66,2697	1/1:0,14:14:39.13:1090,39,0	1/1:0,21:21:42.14:1127,42,0	1/1:0,28:28:42.14:1143,42,0	1/1:0,19:19:42.14:1128,42,0	1/1:1,26:27:51.18:1396,51,0	1/1:0,24:24:42.14:1173,42,0	1/1:0,24:24:48.16:1315,48,0	0/0:40,0:40:99:0,120,5024	0/0:28,0:28:84.24:0,84,3264	0/0:13,0:13:39.13:0,39,1637
chr10	16454279	.	ATGAG	A	2784.65	PASS	AC=24;AF=0.444;AN=54;BaseQRankSum=5.412;DP=540;FS=0.410;HRun=0;HaplotypeScore=149.5443;InbreedingCoeff=0.8773;MQ=66.21;MQ0=8;MQRankSum=-3.596;QD=11.95;ReadPosRankSum=-6.766;VQSLOD=1.0424;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:27:43.49:0,43,360	0/0:11,0:11:29.94:0,30,243	0/0:19,0:16:35.31:0,35,386	0/0:16,0:12:4.48:0,4,95	0/0:17,0:17:32.83:0,33,260	1/1:1,17:17:5.98:58,6,0	1/1:1,0:17:3:26,3,0	1/1:4,0:29:58.65:472,59,0	1/1:0,14:14:3.01:60,3,0	0/0:26,0:26:77.70:0,78,670	0/0:22,0:22:44.73:0,45,351	0/0:18,0:18:43.13:0,43,401	1/1:9,4:14:41.86:457,42,0	1/1:0,16:16:2.97:20,3,0	0/0:18,0:18:39.17:0,39,331	0/0:20,0:21:57.75:0,58,517	0/0:20,0:19:38.35:0,38,386	0/0:20,0:21:36.26:0,36,442	1/1:24,2:22:62.71:586,63,0	1/1:16,6:23:50.09:404,50,0	1/1:14,0:13:29.77:216,30,0	1/1:13,4:19:29.89:241,30,0	1/1:13,1:14:28.09:208,28,0	1/1:23,1:24:34.13:245,34,0	./.	0/0:19,0:18:24.41:0,24,357	0/0:28,0:29:52.09:0,52,547	0/0:6,0:6:7.56:0,8,97
chr10	16454280	.	TGA	T	1086	PASS	AB=0.988;AC=26;AF=0.867;AN=30;BaseQRankSum=2.415;DP=533;FS=4.105;HRun=0;HaplotypeScore=139.4585;InbreedingCoeff=0.0986;MQ=64.21;MQ0=11;MQRankSum=-1.508;QD=3.73;ReadPosRankSum=-2.357;VQSLOD=2.2481;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:28:1.19:1,0,2	./.	./.	./.	1/1:14,2:17:3:32,3,0	0/1:18,0:17:0:0,0,0	./.	./.	1/1:15,0:15:2.84:14,3,0	1/1:19,6:26:21.04:216,21,0	./.	1/1:16,1:17:1.23:69,1,0	1/1:14,0:14:11.67:72,12,0	./.	0/1:17,0:17:5.21:5,0,19	1/1:19,2:21:13.37:122,13,0	1/1:17,3:19:12.02:124,12,0	0/1:19,1:20:19.59:161,0,20	1/1:25,0:21:5.80:33,6,0	./.	./.	./.	./.	./.	./.	1/1:13,4:17:14.86:136,15,0	1/1:24,2:29:10.08:171,10,0	1/1:5,0:6:2.96:19,3,0
chr10	16454341	.	G	GAC	163.20	PASS	AB=0.979;AC=7;AF=0.135;AN=52;BaseQRankSum=5.729;DP=596;FS=0.932;HRun=0;HaplotypeScore=176.5143;InbreedingCoeff=0.0727;MQ=35.98;MQ0=56;MQRankSum=-4.275;QD=1.07;ReadPosRankSum=-2.224;VQSLOD=2.3603;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:28:37.01:0,37,549	0/0:10,0:10:18.06:0,18,275	./.	./.	0/0:18,1:16:6.02:0,6,89	0/0:15,0:12:5.87:0,6,91	0/0:26,0:24:16.95:0,17,231	0/0:46,0:41:99:0,114,1610	0/0:17,0:15:9.93:0,10,220	0/1:26,0:19:13.39:13,0,595	0/0:19,0:15:9.42:0,9,136	0/0:25,0:24:56.82:0,57,674	0/0:19,0:16:34.30:0,34,435	0/0:16,0:14:5.70:0,6,87	0/0:26,0:25:45.14:0,45,667	0/0:31,0:30:75.22:0,75,1098	0/1:27,2:24:63.41:63,0,435	0/0:33,0:24:48.05:0,48,667	0/0:22,0:18:43.53:0,44,626	0/0:19,0:18:4.37:0,4,48	0/0:24,0:18:0.62:0,1,3	1/1:22,0:20:0.33:4,0,0	0/0:10,0:9:0.06:0,0,0	0/0:26,0:19:5.42:0,5,88	0/0:11,0:8:0:0,0,0	0/1:32,0:20:11.46:11,0,526	0/1:24,1:22:99:166,0,194	0/1:18,0:12:15.34:15,0,284
chr10	16454357	.	GAC	G	343.93	PASS	AB=0.824;AC=13;AF=0.260;AN=50;BaseQRankSum=7.370;DP=578;FS=8.340;HRun=0;HaplotypeScore=165.0355;InbreedingCoeff=0.0261;MQ=37.81;MQ0=52;MQRankSum=-5.853;QD=1.40;ReadPosRankSum=-2.116;VQSLOD=1.6622;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:27:45.06:0,45,818	0/0:10,0:10:21.07:0,21,328	./.	./.	0/0:23,0:20:21.04:0,21,328	0/1:12,5:14:1.98:2,0,45	0/1:21,1:22:3.68:4,0,99	0/1:42,0:37:22.39:22,0,574	0/1:10,4:12:38.62:39,0,61	0/0:28,0:20:38.34:0,38,827	0/0:18,0:15:14.62:0,15,204	0/0:23,0:22:48.09:0,48,955	0/1:5,12:14:43.42:82,0,43	0/0:6,12:16:6.32:0,6,62	0/0:27,0:26:54.19:0,54,1027	0/0:31,1:31:81.21:0,81,1475	0/0:32,0:27:48.47:0,48,791	0/1:27,4:23:83.17:83,0,667	0/1:10,8:15:99:173,0,122	1/1:9,6:15:2.61:18,3,0	1/1:16,4:15:2.63:7,3,0	0/0:8,11:18:0.85:0,1,2	0/0:8,3:10:0:0,0,0	0/1:17,9:19:8.50:40,0,9	./.	0/0:31,1:20:39.33:0,39,692	0/1:24,0:21:3.65:4,0,363	0/0:17,1:11:20.96:0,21,304
chr10	16454369	.	GAC	G	424.84	PASS	AB=0.693;AC=13;AF=0.260;AN=50;BaseQRankSum=9.014;DP=598;FS=3.169;HRun=0;HaplotypeScore=173.3078;InbreedingCoeff=0.3813;MQ=39.33;MQ0=48;MQRankSum=-7.750;QD=2.46;ReadPosRankSum=-0.439;VQSLOD=2.5822;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:26:51.07:0,51,877	0/0:10,0:10:21.07:0,21,378	./.	./.	0/0:25,0:23:27.09:0,27,511	0/1:11,6:15:21.31:21,0,42	0/0:17,0:17:6.33:0,6,107	0/0:30,0:24:38.19:0,38,506	0/1:11,6:15:21.21:21,0,69	0/0:32,0:24:69.03:0,69,1097	0/0:23,0:18:18.06:0,18,341	0/0:22,0:21:57.11:0,57,1081	0/1:6,14:17:0.89:117,0,1	0/1:6,14:19:1.90:2,0,48	0/0:30,0:29:66.23:0,66,1228	0/0:33,0:31:84.26:0,84,1514	0/0:37,0:32:66.07:0,66,1140	0/0:31,0:24:54.17:0,54,910	1/1:11,9:17:7.40:288,7,0	1/1:7,10:17:2.80:45,3,0	1/1:16,4:16:2.15:6,2,0	0/0:9,12:20:1.17:0,1,3	1/1:10,6:15:5.72:47,6,0	0/1:20,6:19:17.45:17,0,28	./.	0/0:31,1:20:5.98:0,6,832	0/0:24,0:21:23.09:0,23,378	0/0:17,0:11:20.90:0,21,337
chr10	16454375	.	GAC	G	1039.86	PASS	AB=0.849;AC=11;AF=0.220;AN=50;BaseQRankSum=8.002;DP=621;FS=2.030;HRun=0;HaplotypeScore=182.4284;InbreedingCoeff=0.3285;MQ=39.75;MQ0=45;MQRankSum=-10.301;QD=5.75;ReadPosRankSum=-3.100;VQSLOD=2.8805;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:26:54.06:0,54,937	0/0:10,0:10:21.07:0,21,378	./.	./.	0/0:25,0:23:30.09:0,30,538	0/1:12,5:15:25.87:26,0,53	0/0:10,8:18:9.33:0,9,140	1/1:37,4:34:38.30:331,38,0	0/1:14,4:16:69.18:69,0,77	0/0:29,0:21:57.15:0,57,1004	0/0:24,0:19:18.06:0,18,341	0/0:22,0:21:57.09:0,57,1087	0/1:20,2:20:34.51:288,0,35	0/1:19,2:20:36.08:36,0,47	0/0:29,0:28:66.23:0,66,1249	0/0:36,0:34:93.24:0,93,1652	0/0:36,0:31:66.09:0,66,1139	0/0:29,0:22:57.14:0,57,1040	1/1:16,5:18:22.56:425,23,0	0/1:15,4:19:4.52:5,0,25	1/1:17,5:18:2.15:5,2,0	0/0:16,5:20:1.17:0,1,3	0/0:17,1:17:7.72:0,8,49	0/0:28,1:22:5.37:0,5,70	./.	0/0:34,0:22:45.70:0,46,937	0/0:24,0:22:27.08:0,27,443	0/0:17,0:11:20.81:0,21,334
chr10	16454381	.	GAC	G	1647.34	PASS	AB=1.000;AC=15;AF=0.300;AN=50;BaseQRankSum=9.178;DP=631;FS=1.848;HRun=0;HaplotypeScore=182.8634;InbreedingCoeff=0.5920;MQ=40.86;MQ0=41;MQRankSum=-10.209;QD=7.23;ReadPosRankSum=-3.247;VQSLOD=2.6063;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:54.09:0,54,963	0/0:10,0:10:21.07:0,21,378	./.	./.	0/0:23,0:21:30.10:0,30,571	1/1:18,0:16:7.35:50,7,0	0/0:17,0:17:8.54:0,9,113	1/1:32,12:34:60.90:799,61,0	0/1:18,0:16:57.58:77,0,58	0/0:30,0:23:69.19:0,69,1193	0/0:22,0:17:18.06:0,18,341	0/0:24,0:23:63.01:0,63,1186	1/1:23,0:21:29.32:335,29,0	0/1:22,0:21:36.88:37,0,46	0/0:32,0:31:78.23:0,78,1407	0/0:36,0:33:93.32:0,93,1731	0/0:39,0:35:69.18:0,69,1213	0/0:28,0:21:57.09:0,57,1047	1/1:19,1:18:44.61:494,45,0	0/1:18,0:18:2.10:2,0,5	0/1:21,0:18:0.64:1,0,1	0/1:24,0:23:0.18:0,0,1	1/1:20,0:19:0.87:10,1,0	0/0:26,1:20:5.50:0,6,105	./.	0/0:33,0:22:54.18:0,54,967	0/0:26,0:24:38.95:0,39,569	0/0:14,0:10:17.99:0,18,284
chr10	16454387	.	GAC	G	1613.43	PASS	AB=0.693;AC=16;AF=0.320;AN=50;BaseQRankSum=8.572;DP=620;FS=0.540;HRun=0;HaplotypeScore=176.9939;InbreedingCoeff=0.6415;MQ=42.30;MQ0=39;MQRankSum=-9.235;QD=7.61;ReadPosRankSum=-2.790;VQSLOD=2.8096;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,1:30:60.15:0,60,992	0/0:11,0:11:27:0,27,357	./.	./.	0/0:23,0:22:30.05:0,30,464	1/1:9,7:14:8.49:121,8,0	0/1:14,2:16:31.28:34,0,31	1/1:31,5:25:55.58:517,56,0	0/1:8,8:14:42.85:50,0,43	0/0:34,0:27:64.47:0,64,858	0/0:20,0:15:18.04:0,18,294	0/0:23,0:22:66.20:0,66,1197	1/1:2,23:23:33.80:307,34,0	0/1:4,18:21:2.34:2,0,47	0/0:30,0:29:78.18:0,78,1357	0/0:39,0:36:96.27:0,96,1717	0/0:39,0:35:64.67:0,65,937	0/0:27,0:21:57.19:0,57,1066	1/1:7,14:19:48.69:507,49,0	1/1:4,13:17:8.82:119,9,0	0/0:9,11:17:1.25:0,1,3	0/1:12,12:23:0.15:0,0,1	1/1:4,15:18:9.01:128,9,0	0/0:15,9:17:5.44:0,5,102	./.	0/0:32,0:22:60.02:0,60,861	0/0:26,0:24:36:0,36,456	0/0:15,0:11:17.83:0,18,171
chr10	16454393	.	GAC	G	1510.02	PASS	AB=0.977;AC=27;AF=0.500;AN=54;BaseQRankSum=7.867;DP=600;FS=14.966;HRun=0;HaplotypeScore=165.7512;InbreedingCoeff=0.3193;MQ=43.72;MQ0=33;MQRankSum=-5.281;QD=3.78;ReadPosRankSum=-4.067;VQSLOD=0.7242;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:72.09:0,72,1152	0/0:8,0:8:2.64:0,3,121	./.	0/0:2,0:1:2.98:0,3,22	0/1:23,0:22:2.41:2,0,153	1/1:14,0:12:11.92:146,12,0	1/1:14,0:14:5.12:50,5,0	1/1:36,0:25:46.26:312,46,0	0/1:17,0:15:44.12:46,0,44	0/1:32,0:29:41.28:41,0,189	0/0:16,0:13:10.22:0,10,114	0/0:26,0:25:75.24:0,75,1332	1/1:24,0:22:32.09:317,32,0	0/1:23,0:22:2.39:2,0,47	0/0:27,0:26:72.21:0,72,1317	0/0:36,0:33:93.23:0,93,1687	0/1:38,0:35:11.48:11,0,336	0/0:29,0:23:63.16:0,63,1091	1/1:21,0:19:36.94:403,37,0	1/1:18,0:18:11.82:156,12,0	1/1:20,0:18:1.03:22,1,0	0/1:17,6:22:0:0,0,0	1/1:18,0:17:9.01:128,9,0	0/0:23,0:18:5.79:0,6,46	1/1:14,0:10:2.89:24,3,0	0/1:30,0:23:8.88:9,0,264	0/1:25,0:24:9.97:10,0,131	0/1:10,0:8:1.61:2,0,23
chr10	16454395	.	C	CAG	5183.09	PASS	AB=0.935;AC=25;AF=0.463;AN=54;BaseQRankSum=-8.728;DP=603;FS=39.740;HRun=0;HaplotypeScore=151.0119;InbreedingCoeff=0.4626;MQ=45.57;MQ0=31;MQRankSum=1.619;QD=15.75;ReadPosRankSum=0.116;VQSLOD=2.9482;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:72.04:0,72,921	1/1:2,6:8:9.03:159,9,0	./.	0/1:5,0:3:0.15:0,0,17	1/1:2,22:23:30.02:495,30,0	0/0:16,0:14:2.75:0,3,10	0/0:14,0:14:4.67:0,5,24	0/0:34,0:24:25.36:0,25,100	0/0:16,0:14:8.46:0,8,61	1/1:3,29:30:84.22:1345,84,0	1/1:3,11:11:15.05:266,15,0	0/0:26,0:25:72.22:0,72,962	0/0:23,0:21:19.71:0,20,110	0/1:23,0:22:13.99:14,0,52	0/0:27,0:27:72.22:0,72,951	0/0:35,0:32:90.25:0,90,1171	0/1:7,33:37:21.41:1039,0,21	0/0:30,0:24:66.16:0,66,851	0/1:21,0:19:4.90:5,0,86	0/1:17,0:17:4.16:18,0,4	1/1:19,0:17:2.59:10,3,0	0/1:20,0:19:0:0,0,0	0/0:17,0:17:4.88:0,5,14	0/1:23,0:18:14.62:15,0,29	1/1:14,0:11:3:25,3,0	1/1:7,25:27:72.11:1105,72,0	1/1:3,21:24:32.45:582,32,0	1/1:2,7:8:6.02:106,6,0
chr10	16454399	.	GAC	G	607.95	PASS	AB=0.937;AC=6;AF=0.107;AN=56;BaseQRankSum=6.275;DP=633;FS=5.313;HRun=0;HaplotypeScore=161.6046;InbreedingCoeff=0.0022;MQ=46.84;MQ0=32;MQRankSum=-7.225;QD=4.44;ReadPosRankSum=-0.468;VQSLOD=2.2258;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:84.15:0,84,1312	0/0:7,0:7:11.98:0,12,119	0/0:5,0:2:3:0,3,26	0/0:9,0:4:2.27:0,2,63	0/0:23,0:23:24.09:0,24,249	0/0:18,0:16:4.29:0,4,99	0/1:15,0:15:2.74:3,0,4	0/1:22,15:26:99:614,0,113	0/0:16,0:14:5.50:0,5,96	0/0:37,0:33:41.63:0,42,659	0/0:18,0:15:24:0,24,229	0/0:28,0:27:75.18:0,75,1272	0/1:23,0:21:6.48:6,0,23	0/0:24,0:23:15.02:0,15,182	0/0:27,0:27:78.16:0,78,1293	0/0:34,0:31:89.99:0,90,1523	0/0:40,0:37:69.82:0,70,521	0/0:31,0:25:69.06:0,69,1099	0/1:22,1:20:78.41:78,0,89	0/0:17,0:17:1.24:0,1,14	0/1:19,0:17:1.23:1,0,63	0/1:19,1:19:0:0,0,0	0/0:18,0:18:2.94:0,3,30	0/0:23,0:19:5.77:0,6,45	0/0:14,1:12:5.32:0,5,72	0/0:33,0:27:52.40:0,52,511	0/0:25,0:25:14.92:0,15,267	0/0:12,0:10:11.93:0,12,93
chr10	16456276	.	CACACAG	C	7037.70	PASS	AB=0.580;AC=40;AF=0.714;AN=56;BaseQRankSum=12.832;DP=769;FS=0.441;HRun=0;HaplotypeScore=194.0885;InbreedingCoeff=0.7487;MQ=54.77;MQ0=8;MQRankSum=-8.835;QD=14.30;ReadPosRankSum=-1.912;VQSLOD=3.7114;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:56:99:0,129,3596	1/1:2,8:10:15.05:307,15,0	0/0:51,0:31:30.13:0,30,631	0/0:53,0:35:41.62:0,42,891	1/1:13,12:25:0.47:1,0,0	1/1:3,15:18:15.05:316,15,0	1/1:10,18:28:5.81:126,6,0	1/1:16,16:31:48.08:704,48,0	1/1:8,28:36:22.25:621,22,0	1/1:10,16:26:48.12:915,48,0	1/1:7,16:23:14.56:314,15,0	0/0:21,0:21:48.16:0,48,1418	1/1:9,16:25:36.10:717,36,0	1/1:4,17:21:18.06:379,18,0	0/0:39,0:39:93.32:0,93,2992	0/0:34,0:34:75.26:0,75,2335	1/1:9,22:31:7.35:187,7,0	0/0:23,0:22:48.13:0,48,1268	1/1:12,3:15:9.03:183,9,0	1/1:6,17:23:21.07:407,21,0	0/1:5,22:27:0:0,0,0	1/1:3,22:25:5.63:115,6,0	1/1:3,14:17:5.91:126,6,0	0/1:15,26:41:74.18:235,0,74	1/1:6,13:19:2.93:63,3,0	1/1:9,8:17:27.07:440,27,0	1/1:7,18:25:33.11:687,33,0	1/1:6,1:7:12.03:197,12,0
chr10	16458677	.	TACATAC	T	3461.12	PASS	AB=1.000;AC=41;AF=0.732;AN=56;BaseQRankSum=2.225;DP=221;FS=10.286;HRun=0;HaplotypeScore=73.2371;InbreedingCoeff=0.6431;MQ=72.12;MQ0=1;MQRankSum=-5.284;QD=19.67;ReadPosRankSum=0.264;VQSLOD=2.1542;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:6:18.05:0,18,270	1/1:6,0:8:18.03:235,18,0	0/0:7,0:5:15:0,15,230	0/1:16,0:12:15.98:16,0,167	1/1:3,0:3:2.98:25,3,0	1/1:7,0:7:2.85:50,3,0	0/0:0,5:5:0:0,0,0	1/1:23,0:22:60.17:867,60,0	1/1:7,1:8:15.03:231,15,0	1/1:3,0:3:9.02:108,9,0	1/1:5,1:9:12.04:203,12,0	0/0:4,0:4:12.04:0,12,197	1/1:3,0:3:5.83:38,6,0	1/1:3,1:5:6.49:87,6,0	0/0:6,0:6:18.02:0,18,225	0/0:7,0:7:18.02:0,18,224	1/1:18,0:21:18.01:196,18,0	0/0:10,0:9:18.80:0,19,223	1/1:1,9:10:27.09:409,27,0	1/1:10,1:11:9:125,9,0	1/1:5,0:5:2.98:22,3,0	1/1:6,0:6:3:25,3,0	1/1:4,0:4:8.99:75,9,0	1/1:3,0:3:2.88:24,3,0	1/1:10,0:9:14.99:148,15,0	1/1:6,0:7:21.05:275,21,0	1/1:7,0:7:9.03:112,9,0	1/1:6,0:7:14.98:191,15,0
chr10	16458681	.	TAC	T	1282.65	PASS	AB=1.000;AC=31;AF=0.620;AN=50;BaseQRankSum=4.639;DP=201;FS=25.629;HRun=0;HaplotypeScore=68.0697;InbreedingCoeff=0.5220;MQ=67.52;MQ0=1;MQRankSum=-3.386;QD=8.73;ReadPosRankSum=1.238;VQSLOD=1.2661;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:6:14.98:0,15,123	1/1:5,2:7:11.98:98,12,0	0/0:7,0:5:9:0,9,92	0/0:13,0:9:0.76:0,1,78	./.	0/1:8,0:8:0.94:20,0,1	0/0:5,0:5:0:0,0,0	1/1:20,0:19:47.76:380,48,0	1/1:8,0:8:14.82:104,15,0	1/1:3,0:3:5.93:40,6,0	1/1:6,3:9:11.96:95,12,0	0/0:4,0:4:11.98:0,12,98	0/1:4,0:4:8.26:8,0,9	1/1:5,0:5:5.85:55,6,0	0/0:5,0:5:8.99:0,9,75	0/0:5,0:5:8.99:0,9,75	1/1:17,3:20:8.80:62,9,0	0/1:9,0:8:34.56:35,0,87	1/1:9,0:9:26.79:194,27,0	1/1:10,0:10:5.99:50,6,0	./.	./.	0/1:3,0:3:0:0,0,0	0/1:3,0:3:0.04:0,0,0	1/1:8,0:8:5.84:39,6,0	1/1:6,1:7:17.62:123,18,0	1/1:8,0:8:8.84:55,9,0	1/1:5,1:6:11.82:82,12,0
chr10	16458736	.	A	ATG	1482.73	PASS	AB=0.651;AC=21;AF=0.477;AN=44;BaseQRankSum=0.752;DP=215;FS=2.994;HRun=0;HaplotypeScore=89.6377;InbreedingCoeff=0.0838;MQ=54.10;MQ0=4;MQRankSum=-3.185;QD=10.02;ReadPosRankSum=1.499;VQSLOD=3.4841;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:3,0:3:9.01:0,9,115	0/0:1,2:3:2.92:0,3,17	./.	0/0:9,0:4:7.83:0,8,68	./.	1/1:3,5:7:0.89:2,1,0	1/1:1,1:2:3.01:51,3,0	0/1:25,7:32:1.73:428,0,2	0/1:2,3:5:13.79:31,0,14	1/1:1,8:9:15.05:256,15,0	1/1:6,6:11:3.01:32,3,0	0/0:3,0:3:9.03:0,9,137	0/1:2,1:3:10.93:49,0,11	0/1:2,5:8:10.61:69,0,11	0/0:3,0:3:6.02:0,6,92	./.	0/1:10,19:29:24.37:169,0,24	0/0:11,0:10:6.58:0,7,282	0/1:2,1:3:8.79:63,0,9	1/1:5,4:9:3.01:55,3,0	./.	./.	0/1:0,2:2:0:0,0,0	./.	0/0:5,9:15:2.41:0,2,11	0/1:2,3:5:1.81:150,0,2	1/1:0,10:10:12.04:212,12,0	0/1:4,6:10:30.14:47,0,30
chr10	16459181	.	T	TC	555.45	PASS	AB=0.950;AC=14;AF=0.250;AN=56;BaseQRankSum=4.423;DP=308;FS=0.000;HRun=2;HaplotypeScore=80.6221;InbreedingCoeff=0.6746;MQ=79.04;MQ0=4;MQRankSum=-5.546;QD=11.11;ReadPosRankSum=-0.699;VQSLOD=1.3927;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:51.14:0,51,638	1/1:0,2:2:3.01:41,3,0	0/0:36,0:20:45.21:0,45,539	0/0:38,0:18:25.85:0,26,271	1/1:5,3:8:14.09:125,14,0	0/0:8,0:8:24.06:0,24,297	0/0:15,0:15:33.95:0,34,512	0/0:14,0:14:36.11:0,36,450	0/0:7,0:7:21.04:0,21,243	0/1:8,1:9:9.28:171,0,9	1/1:8,0:7:8.61:75,9,0	0/0:10,0:10:27.09:0,27,351	0/0:9,0:9:24.07:0,24,298	0/0:12,0:11:33.10:0,33,416	0/0:9,0:9:27.09:0,27,351	0/0:7,0:7:21.07:0,21,272	0/1:3,0:3:26.52:31,0,27	0/0:8,0:8:21.59:0,22,221	0/0:8,0:8:24.08:0,24,310	0/0:6,1:7:12.04:0,12,151	0/0:20,0:20:31.41:0,31,455	0/0:6,0:6:11.28:0,11,159	0/0:6,0:6:15.01:0,15,175	0/0:8,0:8:15.04:0,15,186	0/0:10,0:10:27.04:0,27,308	1/1:4,1:5:8.69:67,9,0	1/1:9,3:12:1.49:174,1,0	1/1:3,0:3:8.32:37,8,0
chr10	16459182	.	CTCTT	C	1079.59	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=3.429;DP=309;FS=1.388;HRun=0;HaplotypeScore=90.4391;InbreedingCoeff=0.8428;MQ=78.77;MQ0=4;MQRankSum=-5.739;QD=22.49;ReadPosRankSum=-1.436;VQSLOD=3.0587;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:51.15:0,51,1311	1/1:2,0:2:2.92:17,3,0	0/0:38,0:21:29.28:0,29,1115	0/0:41,0:18:29.52:0,30,502	1/1:6,2:8:14.40:159,14,0	0/0:9,0:8:21.54:0,22,437	0/0:15,0:15:37.18:0,37,757	0/0:14,0:14:36.07:0,36,708	0/0:7,0:7:21.03:0,21,352	1/1:2,7:9:19.36:319,19,0	1/1:1,7:7:9.03:123,9,0	0/0:9,0:9:27.09:0,27,768	0/0:9,0:9:24.08:0,24,430	0/0:12,0:11:33.09:0,33,564	0/0:9,0:9:27.09:0,27,769	0/0:7,0:7:21.07:0,21,573	1/1:3,0:3:1.56:16,2,0	0/0:8,0:8:5.64:0,6,477	0/0:8,0:8:24.07:0,24,430	0/0:7,0:7:14.88:0,15,220	0/0:20,0:20:32.97:0,33,680	0/0:6,0:6:3.75:0,4,247	0/0:7,0:6:15.04:0,15,246	0/0:8,0:8:15.52:0,16,254	0/0:10,0:10:27.07:0,27,434	1/1:1,2:3:9.03:125,9,0	1/1:6,6:12:26.82:375,27,0	1/1:0,3:3:9.03:130,9,0
chr10	16459193	.	CT	C	1152.87	PASS	AB=1.000;AC=37;AF=0.661;AN=56;BaseQRankSum=6.174;DP=306;FS=4.139;HRun=1;HaplotypeScore=74.4679;InbreedingCoeff=0.5077;MQ=73.67;MQ0=7;MQRankSum=-0.295;QD=7.21;ReadPosRankSum=-1.263;VQSLOD=0.2417;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:42.12:0,42,632	0/1:2,0:2:0:0,0,0	0/0:37,1:16:24.70:0,25,483	0/0:54,0:19:28.19:0,28,328	1/1:2,2:3:5.90:42,6,0	1/1:9,0:8:0.69:31,1,0	1/1:11,0:11:0.10:55,0,0	0/1:11,0:11:8.04:8,0,26	1/1:5,0:5:0.90:28,1,0	1/1:2,7:9:11.87:130,12,0	1/1:4,3:6:8.89:68,9,0	0/0:12,0:12:33.10:0,33,490	0/1:9,0:9:10.38:20,0,10	1/1:12,0:11:22.14:117,22,0	0/0:9,0:9:27.06:0,27,378	0/0:9,0:9:24.07:0,24,353	0/1:3,0:3:0.78:11,0,1	0/0:8,0:8:20.17:0,20,251	1/1:6,0:6:11.40:70,11,0	1/1:8,0:8:9.32:121,9,0	1/1:19,0:19:12.52:156,13,0	1/1:8,0:8:0.90:31,1,0	1/1:6,0:5:7.64:66,8,0	0/1:7,0:7:2.43:40,0,2	1/1:7,0:7:1.17:33,1,0	1/1:1,2:3:8.97:72,9,0	1/1:3,6:9:16.38:140,16,0	1/1:2,3:5:11.94:92,12,0
chr10	16459698	.	C	CA	5345.31	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=2.824;DP=750;FS=6.880;HRun=8;HaplotypeScore=129.9155;InbreedingCoeff=0.9997;MQ=81.85;MQ0=0;MQRankSum=-0.678;QD=27.55;ReadPosRankSum=1.914;VQSLOD=3.3924;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:59,0:59:99:0,150,1341	1/1:1,13:14:33.10:381,33,0	0/0:23,0:24:47.51:0,48,464	0/0:21,0:20:32.92:0,33,359	1/1:5,25:30:69.12:765,69,0	0/0:30,0:30:86.86:0,87,777	0/0:39,0:39:99:0,105,947	0/0:27,0:27:60.48:0,60,550	0/0:21,0:21:56.96:0,57,505	1/1:3,27:30:59.40:897,59,0	1/1:1,18:19:54.12:608,54,0	0/0:28,1:29:49.43:0,49,706	0/0:27,0:27:77.99:0,78,699	0/0:21,0:21:54.02:0,54,494	0/0:35,0:35:99:0,102,919	0/0:24,1:25:37.39:0,37,590	1/1:2,35:37:93.28:1073,93,0	0/0:18,0:18:51.03:0,51,467	0/0:21,0:21:48.02:0,48,437	0/0:28,0:28:78.02:0,78,709	0/0:30,0:30:81.01:0,81,734	0/0:35,0:36:99:0,104,929	0/0:25,0:25:68.75:0,69,610	0/0:22,0:22:57.03:0,57,522	0/0:18,0:18:48.01:0,48,435	1/1:3,17:20:51.12:566,51,0	1/1:4,25:30:66.03:742,66,0	1/1:2,12:14:27.97:313,28,0
chr10	16459971	.	T	TGA	26729.99	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=-16.378;DP=759;FS=4.413;HRun=0;HaplotypeScore=76.9609;InbreedingCoeff=0.9999;MQ=82.93;MQ0=5;MQRankSum=-4.311;QD=46.65;ReadPosRankSum=1.731;VQSLOD=6.3161;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,99,1385	1/1:1,17:18:45.15:811,45,0	0/0:24,0:25:53.58:0,54,765	0/0:21,0:21:48.05:0,48,667	1/1:2,39:41:99:1837,102,0	1/1:1,24:25:63.22:1135,63,0	1/1:3,13:16:36.12:648,36,0	1/1:1,39:42:99:2157,123,0	1/1:1,22:23:57.20:1026,57,0	1/1:2,35:37:99:1828,102,0	1/1:1,29:30:87.30:1567,87,0	0/0:34,0:34:96.29:0,96,1302	1/1:3,29:33:87.30:1561,87,0	1/1:0,25:24:60.21:1080,60,0	0/0:31,0:31:90.29:0,90,1244	0/0:17,0:17:45.14:0,45,613	1/1:1,25:26:75.26:1350,75,0	0/0:22,0:22:63.21:0,63,882	1/1:2,18:21:57.18:999,57,0	1/1:2,31:34:78.27:1405,78,0	1/1:1,26:27:66.23:1189,66,0	1/1:2,24:26:63.22:1135,63,0	1/1:1,26:25:69.24:1243,69,0	1/1:1,10:11:30.10:540,30,0	1/1:0,23:22:57.20:1027,57,0	1/1:2,27:30:81.28:1459,81,0	1/1:6,33:38:96.33:1708,96,0	1/1:0,19:19:57.20:1026,57,0
chr10	16461591	.	TG	T	11385.18	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=13.739;DP=627;FS=0.000;HRun=5;HaplotypeScore=148.6486;InbreedingCoeff=0.9979;MQ=74.39;MQ0=0;MQRankSum=-12.413;QD=27.11;ReadPosRankSum=-0.995;VQSLOD=2.5366;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,123,1672	1/1:4,6:10:24.06:264,24,0	0/0:22,0:22:54.18:0,54,739	0/0:21,0:21:55.67:0,56,689	1/1:1,14:15:33.09:366,33,0	1/1:1,14:15:39.11:442,39,0	1/1:3,21:24:57.16:646,57,0	1/1:8,24:32:75.06:826,75,0	1/1:2,19:21:48.14:544,48,0	1/1:4,16:20:48.13:541,48,0	1/1:5,15:20:48.10:522,48,0	0/0:39,0:39:99:0,102,1375	1/1:1,20:21:60.16:672,60,0	1/1:3,18:21:57.15:635,57,0	0/0:20,0:20:60.20:0,60,821	0/0:22,0:21:60.20:0,60,821	1/1:3,23:26:69.14:759,69,0	0/0:41,0:41:99:0,117,1599	1/1:0,14:14:42.12:476,42,0	1/1:2,22:24:54.15:615,54,0	1/1:2,33:35:72.02:766,72,0	1/1:3,15:18:36.10:408,36,0	1/1:2,10:12:18.05:203,18,0	1/1:1,21:22:48.09:529,48,0	1/1:2,14:16:48.10:520,48,0	1/1:5,18:23:60.16:673,60,0	1/1:3,19:22:60.16:674,60,0	1/1:0,9:9:27.08:306,27,0
chr10	16461622	.	ACCATTC	A	23548.83	PASS	AB=0.538;AC=41;AF=0.732;AN=56;BaseQRankSum=16.457;DP=561;FS=3.855;HRun=0;HaplotypeScore=168.1526;InbreedingCoeff=0.9069;MQ=83.98;MQ0=0;MQRankSum=-17.856;QD=65.05;ReadPosRankSum=1.477;VQSLOD=5.4582;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,117,4080	1/1:0,8:8:18.06:461,18,0	0/0:27,0:27:75.11:0,75,2484	0/0:22,0:22:57.20:0,57,1930	1/1:0,15:15:42.14:1075,42,0	1/1:1,15:16:36.12:892,36,0	1/1:0,23:23:60.21:1519,60,0	1/1:2,25:27:78:1948,78,0	0/1:2,12:14:76.80:802,0,77	1/1:0,18:18:51.01:1294,51,0	1/1:1,13:14:36.12:907,36,0	0/0:34,0:34:99:0,102,3774	1/1:0,31:31:81.28:2066,81,0	1/1:0,23:23:63.22:1610,63,0	0/0:18,0:18:54.19:0,54,1917	0/0:19,0:18:57.20:0,57,2030	1/1:3,21:24:54.17:1292,54,0	0/0:40,0:40:99:0,117,4115	1/1:0,10:10:27.09:692,27,0	1/1:2,17:19:54.19:1373,54,0	1/1:4,18:22:45.10:1061,45,0	1/1:1,13:14:39.13:998,39,0	1/1:1,8:9:27.09:664,27,0	1/1:2,18:20:30.10:768,30,0	1/1:1,10:11:33.11:812,33,0	1/1:0,11:11:33.10:791,33,0	1/1:3,21:24:72.25:1834,72,0	1/1:0,9:9:27.09:692,27,0
chr10	16462395	.	AT	A	15896.43	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=12.334;DP=630;FS=2.150;HRun=1;HaplotypeScore=105.3606;InbreedingCoeff=0.9404;MQ=73.12;MQ0=3;MQRankSum=0.820;QD=32.78;ReadPosRankSum=3.402;VQSLOD=4.7059;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,108,1508	1/1:0,3:3:9.03:125,9,0	0/0:20,0:18:1.08:0,1,457	0/0:15,0:15:15.53:0,16,244	1/1:0,17:17:47.91:602,48,0	1/1:0,24:24:60.20:825,60,0	1/1:1,33:33:72.24:998,72,0	1/1:0,22:21:63.08:749,63,0	1/1:2,23:25:24.37:705,24,0	1/1:0,18:18:54:628,54,0	1/1:0,12:12:24.08:332,24,0	0/0:20,0:20:59.95:0,60,814	1/1:0,25:25:60.20:816,60,0	1/1:0,32:32:69.23:954,69,0	0/0:10,0:10:30.10:0,30,452	0/0:17,0:17:51.16:0,51,776	1/1:3,35:37:90.20:1236,90,0	0/0:24,0:24:69.12:0,69,971	1/1:0,24:24:72.12:891,72,0	1/1:2,13:14:36.12:499,36,0	1/1:0,61:61:99:1932,141,0	1/1:0,14:14:36.12:498,36,0	1/1:0,14:14:36.03:470,36,0	1/1:1,33:34:81.27:1114,81,0	1/1:0,27:27:69.23:954,69,0	1/1:0,22:22:66.11:818,66,0	1/1:1,18:19:41.90:544,42,0	1/1:0,5:5:15.05:207,15,0
chr10	16462625	.	A	AAT	3693.30	PASS	AB=0.539;AC=18;AF=0.321;AN=56;BaseQRankSum=1.769;DP=621;FS=10.872;HRun=0;HaplotypeScore=103.4371;InbreedingCoeff=0.3145;MQ=78.55;MQ0=3;MQRankSum=-0.552;QD=12.44;ReadPosRankSum=2.752;VQSLOD=2.4827;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,108,1536	0/0:1,0:6:12.74:0,13,52	0/0:15,0:15:6.42:0,6,406	0/0:20,0:20:41.40:0,41,569	0/0:2,0:26:47.27:0,47,172	0/1:2,1:19:9.57:215,0,10	0/1:3,0:17:41.61:195,0,42	0/1:5,0:25:23.96:336,0,24	0/1:4,0:28:9.11:342,0,9	0/0:9,0:36:78.16:0,78,367	0/0:3,0:15:27.21:0,27,109	0/0:23,0:23:69.15:0,69,1033	1/1:3,0:30:33.73:438,34,0	1/1:2,0:23:2.42:280,2,0	0/0:23,0:23:69.19:0,69,1044	0/0:22,0:22:63.20:0,63,996	0/0:4,0:31:38.21:0,38,189	0/0:14,0:14:42.13:0,42,651	0/1:3,0:22:19.39:241,0,19	0/1:3,0:29:51.02:325,0,51	0/1:4,0:23:49.22:214,0,49	1/1:1,0:24:23.84:354,24,0	0/1:2,0:15:18.20:201,0,18	1/1:1,0:16:18.61:200,19,0	1/1:1,0:23:25.25:352,25,0	0/0:0,0:25:29.43:0,29,129	0/0:4,0:21:22.13:0,22,113	0/0:2,0:11:21.17:0,21,89
chr10	16463807	.	TAAAGTTA	T	24875.21	PASS	AB=0.543;AC=41;AF=0.732;AN=56;BaseQRankSum=14.446;DP=579;FS=6.448;HRun=0;HaplotypeScore=159.3635;InbreedingCoeff=0.8956;MQ=69.30;MQ0=0;MQRankSum=-15.004;QD=57.98;ReadPosRankSum=-2.293;VQSLOD=3.6954;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,120,4493	1/1:0,11:11:33.11:849,33,0	0/0:18,0:18:51.15:0,51,1393	0/0:14,0:13:8.66:0,9,992	1/1:0,32:32:75.11:1740,75,0	1/1:4,26:30:66.23:1709,66,0	1/1:0,14:14:30.10:771,30,0	1/1:1,27:28:81.26:1826,81,0	1/1:3,18:21:42.14:1074,42,0	1/1:3,18:21:54.17:1313,54,0	1/1:0,21:21:54.13:1327,54,0	0/0:20,0:20:60.21:0,60,2083	1/1:0,22:22:54.19:1388,54,0	0/1:4,21:25:65.32:1192,0,65	0/0:18,0:18:48.16:0,48,1813	0/0:21,0:21:57.19:0,57,2069	1/1:1,11:13:24.08:575,24,0	0/0:19,0:19:48.11:0,48,1717	1/1:1,13:14:39.13:887,39,0	1/1:0,24:24:60.20:1528,60,0	1/1:3,15:18:36.12:794,36,0	1/1:2,16:18:45.15:1116,45,0	1/1:1,16:17:36.59:914,37,0	1/1:1,13:14:21.07:511,21,0	1/1:0,17:17:45.15:1164,45,0	1/1:3,36:39:99:2502,108,0	1/1:2,19:21:45.01:1158,45,0	1/1:0,9:9:21.07:538,21,0
chr10	16465600	.	G	GTCCA	36456.23	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=-14.006;DP=806;FS=24.660;HRun=0;HaplotypeScore=116.8569;InbreedingCoeff=1.0000;MQ=82.87;MQ0=0;MQRankSum=-10.581;QD=61.07;ReadPosRankSum=2.322;VQSLOD=4.3137;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,135,2458	1/1:1,14:16:39.13:1035,39,0	0/0:29,0:29:78.20:0,78,1327	0/0:25,0:25:63.15:0,63,1073	1/1:3,26:30:63.10:1664,63,0	1/1:3,20:22:51.18:1359,51,0	1/1:6,26:33:66.23:1745,66,0	1/1:8,26:36:99:2382,99,0	1/1:2,27:30:75.26:1952,75,0	1/1:5,20:24:60.21:1553,60,0	1/1:5,16:21:48.16:1236,48,0	0/0:23,0:23:60.21:0,60,1120	1/1:2,19:23:54.19:1430,54,0	1/1:6,26:32:81.28:2131,81,0	0/0:29,0:29:84.24:0,84,1462	0/0:28,0:28:78.27:0,78,1446	1/1:7,27:32:75.26:1957,75,0	0/0:20,0:20:45.11:0,45,804	1/1:6,15:21:54.16:1321,54,0	1/1:7,29:38:90.31:2316,90,0	1/1:7,33:40:99:2628,102,0	1/1:6,27:34:78.27:2076,78,0	1/1:4,20:25:51.17:1316,51,0	1/1:6,21:26:48.16:1264,48,0	1/1:3,20:24:57.20:1510,57,0	1/1:4,36:38:99:2803,108,0	1/1:2,19:21:57.20:1496,57,0	1/1:0,17:18:48.16:1280,48,0
chr10	16466352	.	CGT	C	1030.63	PASS	AB=0.862;AC=26;AF=0.481;AN=54;BaseQRankSum=3.129;DP=537;FS=11.217;HRun=0;HaplotypeScore=84.5078;InbreedingCoeff=0.4757;MQ=67.93;MQ0=7;MQRankSum=0.829;QD=3.59;ReadPosRankSum=2.035;VQSLOD=1.3671;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:25,5:29:5.76:6,0,310	0/0:3,0:6:3:0,3,26	./.	0/0:22,0:16:3.01:0,3,43	0/0:13,0:12:9.03:0,9,129	1/1:10,7:17:21.06:230,21,0	1/1:20,2:23:12.03:131,12,0	1/1:32,0:31:2.86:25,3,0	0/1:10,3:13:30.79:86,0,31	0/0:15,0:15:17.98:0,18,217	0/0:17,0:15:15.02:0,15,183	0/0:22,0:20:20.43:0,20,277	1/1:16,7:24:11.87:113,12,0	1/1:11,4:16:10.49:110,10,0	0/1:11,0:11:17.94:18,0,134	0/0:25,3:28:6.28:0,6,461	0/0:19,0:19:12.96:0,13,133	0/0:11,0:12:6.92:0,7,207	1/1:20,0:19:2.84:14,3,0	1/1:12,0:12:2.97:20,3,0	1/1:31,7:37:12.50:132,13,0	1/1:10,1:12:8.82:67,9,0	1/1:6,2:8:2.87:20,3,0	0/1:15,6:21:29.58:116,0,30	1/1:6,3:10:14.71:126,15,0	0/0:20,0:24:4.68:0,5,297	0/0:21,0:30:30.06:0,30,358	0/0:11,0:15:15.02:0,15,166
chr10	16469860	.	TAA	T	4880.73	PASS	AB=0.859;AC=42;AF=0.778;AN=54;BaseQRankSum=4.927;DP=297;FS=2.088;HRun=12;HaplotypeScore=41.3867;InbreedingCoeff=0.7362;MQ=52.74;MQ0=25;MQRankSum=-4.044;QD=21.50;ReadPosRankSum=0.230;VQSLOD=3.5655;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:16:27.09:0,27,401	1/1:1,3:3:9.02:92,9,0	0/1:7,0:5:8.06:8,0,80	0/1:8,0:4:10.62:11,0,84	1/1:1,8:8:24.05:244,24,0	1/1:5,5:9:12:122,12,0	1/1:2,7:8:18.04:183,18,0	1/1:7,21:24:18.51:565,19,0	1/1:1,8:9:24.05:244,24,0	1/1:1,4:5:12.02:121,12,0	1/1:0,6:6:11.99:110,12,0	0/0:10,0:9:24.08:0,24,356	1/1:2,12:13:36.08:365,36,0	1/1:1,7:9:23.64:223,24,0	0/0:10,0:10:21.07:0,21,313	0/0:19,0:20:44.63:0,45,613	1/1:3,13:14:39.08:396,39,0	0/0:9,0:5:12.04:0,12,179	1/1:4,12:14:36.08:366,36,0	1/1:0,9:9:24.05:244,24,0	1/1:3,3:3:9.02:92,9,0	./.	1/1:0,4:4:12.03:122,12,0	1/1:2,4:4:9.02:92,9,0	1/1:0,4:4:9.02:92,9,0	1/1:4,11:12:33.07:335,33,0	1/1:0,16:16:42.10:427,42,0	1/1:0,14:14:42.10:427,42,0
chr10	16471511	.	GGA	G	204.28	PASS	AB=0.879;AC=5;AF=0.089;AN=56;BaseQRankSum=4.014;DP=538;FS=1.540;HRun=0;HaplotypeScore=128.9236;InbreedingCoeff=-0.1086;MQ=67.41;MQ0=7;MQRankSum=-3.777;QD=2.38;ReadPosRankSum=-5.682;VQSLOD=0.5573;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,105,2069	0/1:3,1:4:25.48:25,0,147	0/0:38,0:20:28.60:0,29,732	0/0:71,0:35:53.18:0,53,894	0/0:13,0:13:26.82:0,27,422	0/0:14,0:14:24.95:0,25,380	0/1:21,4:24:34.59:35,0,816	0/1:14,8:22:99:213,0,400	0/0:17,0:17:29.45:0,29,437	0/0:20,0:20:26.20:0,26,872	0/0:13,0:13:2.51:0,3,220	0/0:14,0:14:42.13:0,42,782	0/0:21,0:21:30.05:0,30,436	0/0:24,0:24:30.09:0,30,474	0/0:16,0:16:45.14:0,45,867	0/0:16,0:16:48.16:0,48,953	0/0:14,0:14:21.87:0,22,429	0/0:7,0:7:21.06:0,21,390	0/0:22,1:23:50.95:0,51,1059	0/0:15,0:15:24.05:0,24,396	0/0:16,0:16:13.92:0,14,339	0/0:18,0:18:25.85:0,26,393	0/0:20,0:20:28.29:0,28,418	0/1:16,0:16:8.76:9,0,93	0/0:13,0:13:15.02:0,15,176	0/1:19,0:19:36.89:37,0,660	0/0:6,0:5:8.90:0,9,142	0/0:7,0:7:15.05:0,15,297
chr10	16471513	.	A	AGGG	1898.64	PASS	AB=0.985;AC=22;AF=0.393;AN=56;BaseQRankSum=12.438;DP=534;FS=2.036;HRun=4;HaplotypeScore=127.5761;InbreedingCoeff=-0.5472;MQ=67.36;MQ0=6;MQRankSum=-10.472;QD=5.55;ReadPosRankSum=1.534;VQSLOD=-0.2216;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,102,1848	0/1:4,0:4:25.49:25,0,124	0/0:36,0:20:28.21:0,28,596	0/0:68,0:35:33.74:0,34,760	0/1:13,0:13:40.98:41,0,145	0/1:14,1:15:99:122,0,140	0/1:20,3:22:99:215,0,639	0/1:17,3:20:99:371,0,303	0/1:17,0:17:99:103,0,140	0/1:20,0:20:57.07:57,0,534	0/1:13,0:13:56.98:57,0,95	0/0:13,0:13:39.13:0,39,699	0/1:21,0:21:80.67:127,0,81	0/1:25,0:25:93.47:93,0,140	0/0:16,0:16:45.14:0,45,793	0/0:16,0:16:48.16:0,48,879	0/1:14,0:14:53.03:53,0,96	0/0:7,0:7:21.06:0,21,360	0/1:24,0:24:63.90:64,0,929	0/1:15,0:15:15.79:16,0,276	0/1:18,0:18:81.91:82,0,262	0/1:18,0:18:83.57:84,0,197	0/1:20,0:20:99:102,0,197	0/1:16,0:16:58.50:116,0,59	0/1:13,0:13:37.69:60,0,38	0/1:19,0:19:99:239,0,495	0/1:7,0:6:29.02:29,0,42	1/1:7,0:7:0.24:0,0,0
chr10	16471520	.	G	GGAGGGAGAGGGA	20169.40	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=-6.152;DP=566;FS=8.362;HRun=0;HaplotypeScore=141.5318;InbreedingCoeff=0.8958;MQ=68.82;MQ0=2;MQRankSum=-9.302;QD=51.72;ReadPosRankSum=-0.739;VQSLOD=4.1279;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:96.03:0,96,2934	1/1:2,0:2:5.97:75,6,0	0/0:32,0:20:31.89:0,32,595	0/0:53,0:30:4.21:0,4,670	1/1:13,0:13:21:993,21,0	1/1:3,12:17:18.06:1001,18,0	1/1:21,0:20:44.96:1336,45,0	1/1:24,0:24:65.63:1158,66,0	1/1:2,12:23:21.07:1134,21,0	1/1:20,0:20:51.06:1830,51,0	1/1:12,0:12:14.97:647,15,0	0/0:12,0:12:33.11:0,33,1122	1/1:1,23:29:24.08:1449,24,0	1/1:3,22:30:18.06:1088,18,0	0/0:16,0:16:45.05:0,45,1222	0/0:18,0:18:54.15:0,54,1648	1/1:13,0:13:18.06:982,18,0	0/0:7,0:7:18.05:0,18,513	1/1:7,13:27:64.04:2137,64,0	1/1:1,9:21:26.70:495,27,0	1/1:5,13:20:8.06:340,8,0	1/1:2,14:22:12.04:725,12,0	1/1:4,14:21:15.05:907,15,0	1/1:3,14:21:14.76:633,15,0	1/1:0,13:18:12.04:724,12,0	1/1:20,0:20:44.96:1370,45,0	1/1:7,0:6:6.47:330,6,0	1/1:9,0:9:15.05:818,15,0
chr10	16471521	.	G	GAGGGAGAGGGAC	19463.46	PASS	AB=1.000;AC=41;AF=0.732;AN=56;BaseQRankSum=-5.545;DP=561;FS=5.556;HRun=0;HaplotypeScore=145.8868;InbreedingCoeff=0.8464;MQ=70.56;MQ0=2;MQRankSum=-9.573;QD=50.55;ReadPosRankSum=0.708;VQSLOD=4.0582;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,102,3172	1/1:2,0:2:5.97:93,6,0	0/0:32,0:21:44.82:0,45,811	0/0:51,0:31:20.37:0,20,842	1/1:0,11:18:27.02:1163,27,0	1/1:17,0:17:18.06:892,18,0	1/1:22,0:21:34.83:1084,35,0	1/1:24,0:24:29.90:760,30,0	1/1:21,0:21:21.07:1010,21,0	1/1:1,15:23:63.08:2283,63,0	1/1:1,10:13:14.97:713,15,0	0/0:12,0:12:33.11:0,33,1184	1/1:29,0:29:24.08:1312,24,0	1/1:25,0:25:18.06:981,18,0	0/0:16,0:16:45.09:0,45,1361	0/0:18,0:18:54.18:0,54,1783	1/1:1,10:15:18.06:1089,18,0	0/0:7,0:7:18.05:0,18,549	1/1:24,0:24:34.86:1691,35,0	1/1:19,0:19:11.31:349,11,0	1/1:20,0:20:11.07:467,11,0	1/1:19,0:19:12.04:656,12,0	1/1:18,0:18:15.05:820,15,0	0/1:19,0:19:10.14:529,0,10	1/1:15,0:15:12.04:651,12,0	1/1:2,15:21:47.90:1641,48,0	1/1:1,7:9:6.47:365,6,0	1/1:0,9:11:15.05:912,15,0
chr10	16472270	.	TTAATAA	T	2348.43	PASS	AC=26;AF=0.500;AN=52;BaseQRankSum=-0.045;DP=264;FS=11.450;HRun=0;HaplotypeScore=57.3350;InbreedingCoeff=0.7479;MQ=62.23;MQ0=1;MQRankSum=-3.497;QD=21.74;ReadPosRankSum=-1.206;VQSLOD=1.6302;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:33.02:0,33,915	0/0:4,0:4:4.88:0,5,20	./.	./.	0/0:1,0:5:11.95:0,12,191	1/1:8,15:22:27.09:515,27,0	1/1:3,5:8:3.01:63,3,0	1/1:7,14:21:42.07:667,42,0	1/1:6,3:9:3.01:63,3,0	0/0:4,0:6:12.03:0,12,225	0/0:3,0:8:12.04:0,12,315	0/0:6,0:6:15.05:0,15,496	1/1:4,9:13:18.06:352,18,0	1/1:2,2:4:6.02:100,6,0	0/0:5,0:5:9.03:0,9,211	0/0:9,0:9:24.08:0,24,770	0/0:8,0:19:27.08:0,27,654	0/0:21,0:21:51.17:0,51,1486	1/1:3,7:10:21.04:364,21,0	1/1:4,2:6:5.95:81,6,0	1/1:0,3:3:3.01:63,3,0	1/1:1,1:2:3.01:63,3,0	1/1:0,3:3:5.84:126,6,0	1/1:0,2:2:3.01:63,3,0	1/1:4,0:4:2.92:17,3,0	0/0:2,0:8:15.05:0,15,395	0/0:10,0:19:20.74:0,21,137	0/0:7,0:20:18.06:0,18,474
chr10	16473637	.	A	AAAAAG	10954.64	PASS	AB=0.631;AC=39;AF=0.696;AN=56;BaseQRankSum=-3.648;DP=590;FS=4.940;HRun=0;HaplotypeScore=115.5175;InbreedingCoeff=0.6301;MQ=50.72;MQ0=15;MQRankSum=-2.009;QD=31.75;ReadPosRankSum=2.511;VQSLOD=4.2662;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:30:75.90:0,76,1176	1/1:6,2:8:17.84:272,18,0	0/0:76,0:14:12.15:0,12,152	0/0:78,0:21:21.40:0,21,283	1/1:14,3:17:19.13:406,19,0	1/1:4,13:19:11.06:428,11,0	1/1:2,16:19:27.06:715,27,0	1/1:9,10:19:30.75:659,31,0	1/1:3,12:15:18.06:476,18,0	1/1:5,14:19:43.65:942,44,0	0/1:8,6:14:5.41:444,0,5	0/0:9,0:9:21.05:0,21,286	1/1:9,1:9:10.74:249,11,0	1/1:2,4:7:7.86:184,8,0	0/0:13,0:13:11.94:0,12,129	0/0:17,0:17:36.48:0,36,594	0/1:7,6:15:31.58:115,0,32	0/0:20,0:20:38.01:0,38,508	1/1:3,17:21:37.50:1013,38,0	1/1:20,2:22:31.23:768,31,0	1/1:13,3:15:29.43:597,29,0	1/1:4,6:10:6.04:211,6,0	1/1:6,11:18:23.95:782,24,0	0/1:3,15:20:11.01:401,0,11	1/1:10,11:22:1.90:385,2,0	1/1:14,18:31:33.67:1380,34,0	1/1:9,1:10:0.76:280,1,0	1/1:6,2:7:3.10:247,3,0
chr10	16473641	.	A	AG	1090.38	PASS	AB=0.970;AC=24;AF=0.429;AN=56;BaseQRankSum=5.310;DP=557;FS=54.352;HRun=0;HaplotypeScore=105.1403;InbreedingCoeff=-0.2089;MQ=44.55;MQ0=16;MQRankSum=-3.952;QD=3.55;ReadPosRankSum=4.270;VQSLOD=1.2718;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:80.90:0,81,951	0/1:8,0:8:33.44:33,0,55	0/0:76,0:11:22.72:0,23,245	0/0:78,0:23:25.63:0,26,312	0/1:17,1:18:54.01:54,0,58	1/1:20,0:18:10.86:62,11,0	1/1:17,0:17:1.39:89,1,0	0/1:17,0:17:53.20:53,0,92	1/1:13,0:13:12.74:43,13,0	0/1:17,3:20:47.96:113,0,48	0/1:12,0:13:20.43:20,0,71	0/0:8,0:8:21:0,21,251	1/1:7,1:7:9.64:56,10,0	0/1:7,0:7:11.85:20,0,12	0/0:12,0:12:15.02:0,15,156	0/0:15,0:15:39.01:0,39,484	0/0:14,0:14:14.81:0,15,135	0/0:16,0:16:40.88:0,41,462	0/1:23,0:23:25.48:25,0,256	0/1:17,2:19:33.15:231,0,33	0/1:16,1:16:54.10:95,0,54	0/1:9,0:9:10.27:10,0,11	0/1:18,0:18:81.27:92,0,81	0/1:13,0:13:21.07:54,0,21	0/1:18,0:18:47.42:47,0,64	0/1:30,0:29:82.60:83,0,132	0/1:11,1:11:35.53:63,0,36	0/1:7,0:6:18.67:19,0,39
chr10	16473653	.	AGAAGG	A	1215.63	PASS	AB=0.917;AC=26;AF=0.684;AN=38;BaseQRankSum=2.385;DP=434;FS=0.000;HRun=0;HaplotypeScore=103.3832;InbreedingCoeff=0.3384;MQ=41.57;MQ0=27;MQRankSum=-1.922;QD=6.75;ReadPosRankSum=0.997;VQSLOD=2.1140;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:15.05:0,15,367	1/1:3,3:6:6.02:104,6,0	./.	0/0:64,0:18:0:0,0,0	1/1:11,0:10:9.02:130,9,0	./.	0/0:13,0:14:0.47:0,0,1	./.	1/1:12,0:12:3.01:35,3,0	1/1:21,1:21:11.92:164,12,0	1/1:7,2:9:6.02:104,6,0	./.	./.	./.	./.	./.	1/1:8,3:10:9.03:157,9,0	0/0:11,0:10:0:0,0,0	0/1:25,0:24:0:0,0,0	1/1:8,0:8:5.84:35,6,0	./.	1/1:10,0:10:2.98:22,3,0	0/1:12,0:15:27.53:30,0,28	0/0:9,0:9:0:0,0,0	1/1:7,0:11:6.86:46,7,0	1/1:21,5:24:21.07:349,21,0	1/1:4,2:6:6.02:87,6,0	1/1:5,1:6:3.01:52,3,0
chr10	16473663	.	G	GA	328.46	PASS	AB=0.880;AC=10;AF=0.179;AN=56;BaseQRankSum=-0.181;DP=412;FS=12.223;HRun=0;HaplotypeScore=86.3884;InbreedingCoeff=-0.2417;MQ=43.89;MQ0=31;MQRankSum=-2.357;QD=2.59;ReadPosRankSum=-4.048;VQSLOD=0.3538;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:26:66.93:0,67,918	0/0:6,0:6:17.89:0,18,196	0/1:32,0:6:12.73:13,0,70	0/0:52,0:16:12.27:0,12,273	0/0:13,0:12:32.92:0,33,361	0/1:8,2:9:72.56:73,0,181	0/1:13,2:15:72.54:73,0,226	0/0:21,0:19:43.68:0,44,583	0/1:12,2:14:99:113,0,216	0/0:23,0:22:44.68:0,45,527	0/0:9,0:8:17.80:0,18,154	0/0:8,0:5:12.04:0,12,164	0/1:2,1:3:38.31:38,0,49	0/1:5,1:6:38.90:39,0,75	0/0:6,0:5:8.78:0,9,113	0/0:8,0:8:21.07:0,21,293	0/0:12,0:11:23.80:0,24,227	0/0:12,0:9:24.71:0,25,287	0/0:17,0:16:45.15:0,45,620	0/0:12,0:11:11.67:0,12,237	0/0:15,1:12:0.11:0,0,231	0/1:10,1:10:32.72:33,0,82	0/1:14,1:15:23.51:24,0,311	0/1:8,2:9:32.20:32,0,151	0/1:10,1:10:34.40:34,0,136	0/0:30,0:29:66.14:0,66,805	0/0:6,0:6:11.89:0,12,114	0/0:6,0:6:11.95:0,12,143
chr10	16476576	.	GAC	G	3087.35	PASS	AB=0.571;AC=15;AF=0.268;AN=56;BaseQRankSum=0.553;DP=725;FS=8.193;HRun=0;HaplotypeScore=141.5939;InbreedingCoeff=0.9290;MQ=66.81;MQ0=30;MQRankSum=2.441;QD=24.31;ReadPosRankSum=2.500;VQSLOD=4.4003;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:47:99:0,138,2225	0/1:2,6:8:3.04:25,0,3	0/0:50,0:23:65.89:0,66,1036	0/0:50,0:25:67.87:0,68,970	1/1:11,3:13:27.04:352,27,0	0/0:18,0:18:34.40:0,34,468	0/0:36,0:34:29.36:0,29,365	0/0:21,0:20:55.37:0,55,827	0/0:28,0:25:46.92:0,47,676	1/1:3,19:21:62.34:754,62,0	1/1:7,0:7:12.04:162,12,0	0/0:25,0:24:66.03:0,66,1056	0/0:30,0:28:51.68:0,52,777	0/0:34,0:33:60.97:0,61,897	0/0:31,0:31:87.26:0,87,1408	0/0:23,0:22:65.57:0,66,940	1/1:17,9:26:59.46:838,59,0	0/0:20,0:19:53.97:0,54,827	0/0:19,0:18:51.06:0,51,745	0/0:18,0:18:30.08:0,30,430	0/0:36,0:35:63.21:0,63,957	0/0:27,0:26:53.12:0,53,698	0/0:23,0:23:53.64:0,54,747	0/0:37,0:34:45.86:0,46,633	0/0:24,0:24:35.32:0,35,603	1/1:1,20:21:51.59:659,52,0	1/1:2,18:20:17.16:235,17,0	1/1:7,2:9:14.13:259,14,0
chr10	16476585	.	G	GTC	4545.37	PASS	AB=0.576;AC=24;AF=0.429;AN=56;BaseQRankSum=-0.958;DP=779;FS=13.999;HRun=0;HaplotypeScore=156.8645;InbreedingCoeff=0.8508;MQ=59.94;MQ0=34;MQRankSum=-3.221;QD=12.56;ReadPosRankSum=-1.564;VQSLOD=3.4092;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:54:99:0,122,1221	0/0:10,0:10:9.62:0,10,72	0/0:46,0:20:55.44:0,55,501	0/0:46,0:21:36.53:0,37,454	0/0:18,0:17:23.77:0,24,186	1/1:17,2:19:18.30:274,18,0	0/1:12,26:36:21.18:230,0,21	1/1:29,0:28:50.48:451,50,0	1/1:22,4:23:25.05:370,25,0	0/0:29,0:27:70.82:0,71,544	0/0:10,0:10:5.99:0,6,49	0/0:30,0:28:72.74:0,73,761	1/1:25,5:28:28.45:432,28,0	1/1:26,7:33:38.30:502,38,0	0/0:32,0:32:62.75:0,63,858	0/0:27,0:26:45.52:0,46,581	0/0:32,0:32:31.64:0,32,366	0/0:20,0:17:44.99:0,45,489	0/1:4,15:18:3.99:332,0,4	1/1:18,0:18:26.86:219,27,0	1/1:35,2:35:33.01:371,33,0	1/1:23,2:24:37.13:251,37,0	1/1:24,0:24:34.94:346,35,0	1/1:32,6:35:41.83:437,42,0	1/1:24,1:25:19.31:331,19,0	0/0:27,0:27:41.51:0,42,338	0/0:23,0:23:20.72:0,21,131	0/0:11,0:11:26.02:0,26,178
chr10	16476615	.	G	GTCTGTC	5460.41	PASS	AB=0.732;AC=23;AF=0.411;AN=56;BaseQRankSum=-2.840;DP=735;FS=9.110;HRun=0;HaplotypeScore=175.2565;InbreedingCoeff=0.5247;MQ=53.14;MQ0=26;MQRankSum=-6.790;QD=13.82;ReadPosRankSum=2.505;VQSLOD=3.7085;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:54:99:0,115,1738	0/0:7,0:7:9.50:0,9,127	0/0:20,0:8:11.38:0,11,189	0/0:28,0:14:26.97:0,27,550	0/0:17,0:16:5.84:0,6,70	1/1:5,17:27:3.51:526,4,0	1/1:31,0:31:54.32:863,54,0	1/1:36,0:35:58.03:728,58,0	0/1:9,14:23:4.77:529,0,5	0/0:20,0:20:47.61:0,48,571	0/0:14,0:14:2.04:0,2,6	0/0:26,0:25:15.25:0,15,874	1/1:10,21:30:11.87:595,12,0	1/1:11,26:41:17.45:772,17,0	0/0:30,0:30:70.76:0,71,1177	0/1:27,0:27:26.34:26,0,768	0/0:30,0:30:45.01:0,45,849	0/0:20,0:17:21.60:0,22,638	1/1:23,0:21:0.09:432,0,0	1/1:0,12:18:3.01:109,3,0	0/0:11,15:26:4.64:0,5,17	0/1:4,17:22:0:0,0,0	1/1:4,17:23:1.21:216,1,0	1/1:9,30:41:12:269,12,0	0/1:5,20:31:21.45:394,0,21	0/0:23,0:23:36.93:0,37,562	0/0:21,0:21:38.57:0,39,510	0/1:9,0:9:2.04:2,0,184
chr10	16476617	.	GTCTGTC	G	3428.44	PASS	AB=1.000;AC=14;AF=0.259;AN=54;BaseQRankSum=-1.581;DP=705;FS=10.312;HRun=0;HaplotypeScore=173.8794;InbreedingCoeff=0.8186;MQ=52.86;MQ0=25;MQRankSum=-0.521;QD=22.12;ReadPosRankSum=0.975;VQSLOD=2.5198;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:52:99:0,105,2013	0/1:6,0:6:1.76:57,0,2	0/0:19,0:8:21.03:0,21,384	0/1:25,0:14:7.64:8,0,504	1/1:5,13:18:7.25:97,7,0	0/0:24,0:24:23.57:0,24,508	0/0:32,0:31:49.46:0,49,1073	0/0:35,0:34:59.89:0,60,1074	0/0:25,0:22:30.03:0,30,661	1/1:19,0:19:45.56:551,46,0	./.	0/0:27,0:25:43.27:0,43,1677	0/0:32,0:30:32.64:0,33,794	0/0:37,0:36:30.87:0,31,798	0/0:29,0:29:78.02:0,78,1725	0/0:25,0:24:45.56:0,46,1333	1/1:24,2:30:21.44:1012,21,0	0/0:19,0:16:38.86:0,39,899	0/0:23,0:21:48.10:0,48,782	0/0:14,0:14:20.65:0,21,192	0/0:28,0:26:12.04:0,12,229	0/0:22,0:21:35.37:0,35,246	0/0:22,0:22:24.24:0,24,362	0/0:41,0:38:12.92:0,13,235	0/0:29,0:29:7.49:0,7,455	1/1:24,0:24:50.56:627,51,0	1/1:19,3:23:48.23:727,48,0	1/1:7,1:9:20.96:349,21,0
chr10	16476621	.	GTC	G	1244.30	PASS	AB=0.970;AC=10;AF=0.185;AN=54;BaseQRankSum=2.919;DP=680;FS=17.685;HRun=0;HaplotypeScore=143.8242;InbreedingCoeff=0.4312;MQ=54.69;MQ0=19;MQRankSum=0.340;QD=10.37;ReadPosRankSum=4.937;VQSLOD=1.8124;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:48:99:0,117,1992	0/1:5,0:5:17.80:40,0,18	0/0:11,0:8:21.03:0,21,382	0/0:20,0:18:41.24:0,41,670	1/1:16,1:16:1.22:23,1,0	0/0:26,0:26:31.66:0,32,488	0/0:34,0:33:63.21:0,63,1119	0/0:37,0:37:99:0,111,1769	0/0:25,0:22:32.76:0,33,511	0/1:18,0:18:51.31:253,0,51	./.	0/0:26,0:24:66.21:0,66,1181	0/0:31,0:29:32.56:0,33,524	0/0:37,0:36:38.60:0,39,543	0/0:28,0:28:72.19:0,72,1296	0/0:23,0:22:63.22:0,63,1157	0/1:25,4:29:18.53:367,0,19	0/0:20,0:17:45.08:0,45,736	0/0:23,0:21:62.97:0,63,948	0/0:14,0:14:22.46:0,22,148	0/0:28,0:27:15.02:0,15,237	0/0:22,0:21:33.20:0,33,188	0/0:23,0:23:27.07:0,27,297	0/0:41,0:38:12.93:0,13,200	0/0:28,0:28:18.06:0,18,315	0/1:23,0:23:34.69:246,0,35	1/1:19,1:20:22.48:306,22,0	1/1:7,1:8:20.90:160,21,0
chr10	16476964	.	CA	C	1883.66	PASS	AB=0.796;AC=41;AF=0.732;AN=56;BaseQRankSum=4.632;DP=409;FS=1.879;HRun=13;HaplotypeScore=64.3618;InbreedingCoeff=0.4020;MQ=58.27;MQ0=20;MQRankSum=-0.491;QD=6.02;ReadPosRankSum=1.523;VQSLOD=2.3698;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:47.32:0,47,405	0/1:3,4:7:16.06:54,0,16	0/0:28,1:12:9.55:0,10,91	0/1:17,0:9:13.50:14,0,46	1/1:2,14:17:4.68:179,5,0	1/1:9,0:9:7.77:20,8,0	1/1:10,0:9:12.55:44,13,0	0/1:20,0:17:3:24,0,3	1/1:6,0:5:3.11:8,3,0	1/1:0,12:12:29.80:219,30,0	1/1:0,11:11:23.86:175,24,0	0/1:5,2:6:32.66:50,0,33	1/1:8,0:7:4.81:25,5,0	1/1:8,0:8:9.07:27,9,0	0/0:8,1:9:1.96:0,2,166	0/0:13,0:13:24.04:0,24,233	1/1:10,18:25:37.63:266,38,0	0/0:15,1:15:10.30:0,10,293	1/1:22,0:21:23.75:69,24,0	1/1:13,0:13:14.13:40,14,0	1/1:12,0:11:6.48:17,6,0	1/1:12,0:12:8.94:29,9,0	1/1:17,0:16:18.32:50,18,0	1/1:7,0:6:5.14:14,5,0	1/1:16,0:16:17.51:48,18,0	1/1:2,14:16:41.64:299,42,0	0/1:5,16:21:16.51:210,0,17	1/1:4,10:12:23.85:175,24,0
chr10	16476975	.	AAAG	A	1053.91	PASS	AB=0.808;AC=24;AF=0.429;AN=56;BaseQRankSum=8.134;DP=430;FS=0.935;HRun=0;HaplotypeScore=84.9981;InbreedingCoeff=0.7065;MQ=66.92;MQ0=14;MQRankSum=-3.566;QD=6.27;ReadPosRankSum=0.780;VQSLOD=2.4788;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:25:72.09:0,72,1183	0/0:7,0:7:15.03:0,15,175	0/0:37,0:15:18.91:0,19,259	0/0:22,0:12:0.67:0,1,234	0/0:19,0:18:49.65:0,50,521	1/1:8,0:8:12.48:47,12,0	1/1:13,0:13:16.92:60,17,0	1/1:23,0:21:0.96:232,1,0	1/1:5,0:4:4.99:19,5,0	0/0:13,0:13:36.09:0,36,400	0/0:16,0:16:39.07:0,39,395	0/0:9,0:8:21.91:0,22,245	0/1:3,5:7:11.94:43,0,12	1/1:11,0:11:4.43:27,4,0	0/0:10,0:9:24.08:0,24,483	0/0:12,0:12:36.03:0,36,629	0/0:25,0:22:41.67:0,42,410	0/0:16,0:15:44.67:0,45,816	0/1:24,0:23:39.47:146,0,39	1/1:15,2:17:33.70:237,34,0	1/1:8,1:8:9.71:36,10,0	1/1:7,0:7:4.49:28,4,0	1/1:19,1:19:33.04:172,33,0	1/1:8,1:8:8:65,8,0	1/1:13,1:14:25.73:144,26,0	0/0:14,0:14:39.54:0,40,403	0/0:22,0:22:52.89:0,53,553	0/0:11,0:11:24.06:0,24,255
chr10	16476976	.	AAG	A	3510.60	PASS	AB=1.000;AC=27;AF=0.482;AN=56;BaseQRankSum=4.504;DP=427;FS=0.000;HRun=0;HaplotypeScore=70.6289;InbreedingCoeff=0.8681;MQ=69.17;MQ0=14;MQRankSum=-3.584;QD=19.61;ReadPosRankSum=-0.349;VQSLOD=3.1726;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:25:66.12:0,66,919	0/0:6,0:6:14.72:0,15,114	0/0:40,0:18:22.27:0,22,263	0/0:23,0:13:0.28:0,0,181	0/0:19,0:18:28.79:0,29,299	1/1:0,8:8:15.05:199,15,0	1/1:0,13:13:21.07:272,21,0	1/1:14,10:22:31.96:556,32,0	1/1:1,4:4:6.02:80,6,0	0/0:13,0:13:35.04:0,35,228	0/0:16,0:16:38.22:0,38,258	0/0:9,0:8:15.99:0,16,168	1/1:6,1:6:5.83:57,6,0	1/1:1,10:11:14.26:163,14,0	0/0:10,0:9:23.97:0,24,370	0/0:12,0:12:36.03:0,36,517	0/0:24,0:21:30.85:0,31,188	0/0:15,0:14:37.77:0,38,615	1/1:1,21:21:51.40:559,51,0	1/1:3,13:16:41.79:392,42,0	1/1:3,6:8:12.04:157,12,0	1/1:1,6:7:14.07:164,14,0	1/1:2,18:19:38.68:450,39,0	1/1:2,7:8:9.01:102,9,0	1/1:2,12:14:30.06:358,30,0	0/1:14,0:14:1.04:1,0,144	0/0:21,0:21:14.87:0,15,277	0/0:11,0:11:23.20:0,23,130
chr10	16478052	.	CAAA	C	3016.54	PASS	AB=0.806;AC=38;AF=0.679;AN=56;BaseQRankSum=2.860;DP=516;FS=1.575;HRun=18;HaplotypeScore=92.3890;InbreedingCoeff=0.5479;MQ=51.12;MQ0=13;MQRankSum=0.242;QD=7.64;ReadPosRankSum=3.055;VQSLOD=-0.6048;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:71.79:0,72,962	1/1:7,2:10:8.77:72,9,0	0/0:10,0:4:5.69:0,6,62	0/0:7,0:5:8.74:0,9,46	1/1:5,12:17:13.14:102,13,0	1/1:12,4:17:18.23:185,18,0	1/1:14,1:15:15.39:108,15,0	1/1:20,7:26:0.84:249,1,0	1/1:10,0:10:8.17:28,8,0	1/1:13,13:24:33.18:309,33,0	1/1:10,10:20:19.56:168,20,0	0/0:18,0:19:41.87:0,42,477	1/1:17,2:20:3.98:114,4,0	0/1:14,2:16:23.22:94,0,23	0/0:13,0:13:17.91:0,18,184	0/0:12,0:13:28.75:0,29,350	0/1:10,15:23:17.86:105,0,18	0/0:21,0:20:41.28:0,41,560	0/1:19,4:23:41.59:164,0,42	1/1:19,6:25:34.50:294,35,0	1/1:16,1:17:6.57:60,7,0	1/1:16,5:21:15.27:151,15,0	1/1:6,6:11:26.90:247,27,0	0/1:13,2:15:2.94:42,0,3	1/1:19,3:19:12.09:193,12,0	1/1:8,9:18:13.16:149,13,0	1/1:17,7:24:36.38:318,36,0	1/1:4,3:8:4.13:54,4,0
chr10	16478095	.	AT	A	9187.27	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=2.879;DP=553;FS=1.879;HRun=3;HaplotypeScore=81.1321;InbreedingCoeff=0.9984;MQ=76.03;MQ0=0;MQRankSum=-2.326;QD=32.69;ReadPosRankSum=-1.774;VQSLOD=4.4521;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:93.29:0,93,1317	0/0:10,0:10:30.10:0,30,432	0/0:16,0:16:44.49:0,44,590	0/0:9,0:9:24.08:0,24,329	0/0:19,0:19:51.17:0,51,728	1/1:0,12:12:33.10:409,33,0	1/1:2,20:22:45.14:558,45,0	1/1:1,23:24:69.22:855,69,0	1/1:0,20:20:60.19:744,60,0	0/0:30,0:30:87.28:0,87,1236	0/0:13,0:13:33.11:0,33,474	0/0:17,0:17:45.15:0,45,648	1/1:1,18:19:54.17:669,54,0	1/1:0,21:21:54.17:669,54,0	0/0:17,0:17:45.15:0,45,648	0/0:17,0:17:48.16:0,48,691	0/0:22,0:22:48.13:0,48,667	0/0:17,0:16:48.16:0,48,691	1/1:1,31:32:90.27:1100,90,0	1/1:1,22:23:51.16:632,51,0	1/1:0,33:33:84.26:1041,84,0	1/1:0,17:17:45.14:558,45,0	1/1:2,10:12:33.08:390,33,0	1/1:2,21:23:60.19:744,60,0	1/1:2,21:23:66.21:818,66,0	0/0:21,0:21:60.20:0,60,864	0/0:24,0:24:72.20:0,72,1012	0/0:7,0:7:18.06:0,18,259
chr10	16478357	.	CTAGAG	C	8310.11	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=7.054;DP=782;FS=2.477;HRun=0;HaplotypeScore=165.3046;InbreedingCoeff=0.9991;MQ=80.40;MQ0=0;MQRankSum=-5.494;QD=48.88;ReadPosRankSum=4.647;VQSLOD=5.2402;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:64,0:64:99:0,178,5163	1/1:1,13:14:27.09:575,27,0	0/0:27,0:27:66.95:0,67,1953	0/0:24,0:23:57.67:0,58,1482	1/1:0,16:16:36.12:754,36,0	0/0:16,0:16:45.15:0,45,1387	0/0:27,0:27:78.25:0,78,2356	0/0:36,0:36:99:0,102,3019	0/0:30,0:30:84.29:0,84,2519	1/1:3,30:33:78.25:1623,78,0	1/1:1,22:23:57.20:1202,57,0	0/0:30,0:30:87.26:0,87,2512	0/0:23,0:23:69.22:0,69,2089	0/0:30,0:29:87.27:0,87,2486	0/0:40,0:40:99:0,120,3664	0/0:17,0:17:51.16:0,51,1506	1/1:0,18:18:42.14:895,42,0	0/0:27,0:27:81.21:0,81,2274	0/0:25,0:25:72.24:0,72,2060	0/0:25,0:25:75.26:0,75,2284	0/0:47,0:47:99:0,141,4367	0/0:29,0:28:75.26:0,75,2345	0/0:25,0:25:63.20:0,63,1865	0/0:46,0:46:99:0,135,4062	0/0:24,0:23:66.23:0,66,1859	1/1:3,29:32:84.27:1734,84,0	1/1:1,23:24:51.18:1087,51,0	1/1:3,7:10:21.07:440,21,0
chr10	16478500	.	A	ATT	7484.87	PASS	AB=1.000;AC=42;AF=0.750;AN=56;BaseQRankSum=2.754;DP=536;FS=1.281;HRun=1;HaplotypeScore=118.3276;InbreedingCoeff=0.8204;MQ=72.72;MQ0=5;MQRankSum=-5.203;QD=19.34;ReadPosRankSum=-0.659;VQSLOD=2.2590;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:98.52:0,99,1026	1/1:14,0:14:36.91:280,37,0	0/0:32,0:23:59.28:0,59,574	0/0:26,0:14:21.52:0,22,240	1/1:22,0:22:38.14:301,38,0	1/1:13,0:13:27.21:187,27,0	1/1:14,0:14:41.77:363,42,0	1/1:37,0:37:91.69:833,92,0	1/1:17,0:17:33.77:324,34,0	1/1:20,0:20:50.93:378,51,0	1/1:19,0:19:53.74:429,54,0	0/0:13,0:13:32.01:0,32,332	1/1:9,0:9:24:277,24,0	1/1:13,0:13:28.76:256,29,0	0/0:27,0:27:72.03:0,72,763	0/0:11,0:11:30.04:0,30,371	1/1:13,0:13:29.37:229,29,0	0/1:16,0:15:13.09:13,0,163	1/1:10,4:13:30.75:291,31,0	1/1:26,2:28:70.75:742,71,0	1/1:13,0:12:11.88:107,12,0	1/1:21,0:21:41.22:419,41,0	1/1:22,0:22:46.39:458,46,0	1/1:15,0:15:29.95:283,30,0	1/1:20,0:20:51.25:428,51,0	1/1:16,0:15:42.29:339,42,0	1/1:24,0:23:61.91:479,62,0	0/1:7,0:6:7.46:68,0,7
chr10	16478531	.	TCTCTCTCACTCACA	T	3091.10	PASS	AB=1.000;AC=17;AF=0.315;AN=54;BaseQRankSum=1.239;DP=444;FS=13.014;HRun=0;HaplotypeScore=153.7605;InbreedingCoeff=0.5904;MQ=42.95;MQ0=23;MQRankSum=-6.150;QD=19.69;ReadPosRankSum=-1.094;VQSLOD=1.3601;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:56.90:0,57,1710	1/1:2,6:8:6.01:196,6,0	0/0:5,0:2:3.01:0,3,69	0/0:6,0:2:3:0,3,29	1/1:12,3:17:9.49:245,9,0	0/0:17,0:15:18.35:0,18,450	0/0:16,0:15:4.10:0,4,102	0/1:30,0:25:99:126,0,750	0/0:21,0:21:33.03:0,33,788	1/1:12,2:13:34.77:776,35,0	1/1:16,4:20:2.61:49,3,0	0/0:17,0:17:24.52:0,25,911	0/1:12,0:11:28.78:29,0,369	0/0:9,0:9:15.94:0,16,397	0/0:21,0:21:36.04:0,36,1513	0/0:18,0:18:30.57:0,31,1151	1/1:8,2:10:13.29:368,13,0	0/0:14,0:13:27.09:0,27,761	0/0:9,0:7:21.07:0,21,639	0/0:18,0:17:27.56:0,28,928	./.	0/0:26,0:25:20.39:0,20,676	0/0:22,0:20:24.07:0,24,634	0/0:11,0:10:9.01:0,9,200	0/0:14,0:13:23.04:0,23,481	1/1:12,2:12:32.88:754,33,0	1/1:20,3:24:25.77:629,26,0	0/1:7,0:5:99:101,0,205
chr10	16478537	.	TCACTCACA	T	2256.26	PASS	AB=0.968;AC=21;AF=0.420;AN=50;BaseQRankSum=4.163;DP=432;FS=8.121;HRun=0;HaplotypeScore=137.1174;InbreedingCoeff=0.2815;MQ=40.63;MQ0=24;MQRankSum=-5.627;QD=9.90;ReadPosRankSum=1.146;VQSLOD=2.2038;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:52.29:0,52,697	1/1:7,0:7:5.97:84,6,0	./.	./.	1/1:20,0:20:8.77:61,9,0	0/1:18,0:16:4.21:4,0,68	0/0:17,0:15:2.97:0,3,24	0/1:15,10:19:83.80:160,0,84	0/1:19,0:19:54.91:55,0,198	1/1:17,0:16:44.69:625,45,0	0/1:22,0:21:0:0,0,0	0/0:18,0:18:22.43:0,22,458	0/1:12,0:11:31.98:104,0,32	0/1:7,0:7:17.15:17,0,99	0/0:21,0:21:38.97:0,39,942	0/0:24,0:24:39.58:0,40,762	1/1:10,0:10:13.28:250,13,0	0/0:13,0:13:24.12:0,24,292	0/1:8,0:6:2.70:3,0,143	0/0:16,0:15:26.98:0,27,239	./.	0/0:26,0:25:19.97:0,20,148	0/1:19,0:17:4.01:4,0,109	0/0:8,0:7:5.96:0,6,43	0/0:12,0:11:2.33:0,2,74	1/1:12,0:10:26.76:505,27,0	1/1:25,0:24:29.64:448,30,0	0/1:7,0:5:99:102,0,120
chr10	16478541	.	TCACACA	T	1054.48	PASS	AB=0.991;AC=22;AF=0.478;AN=46;BaseQRankSum=4.850;DP=439;FS=0.000;HRun=0;HaplotypeScore=136.0697;InbreedingCoeff=0.2310;MQ=40.69;MQ0=27;MQRankSum=-5.521;QD=4.73;ReadPosRankSum=0.811;VQSLOD=2.4919;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:36.08:0,36,469	1/1:7,0:7:3.01:31,3,0	./.	./.	0/0:20,0:20:0:0,0,0	0/1:18,0:16:20.31:47,0,20	0/1:16,0:14:0.10:0,0,1	1/1:24,0:17:3.19:24,3,0	0/1:19,0:19:73.02:73,0,115	1/1:19,0:17:28.95:250,29,0	./.	0/0:19,0:19:24.08:0,24,413	1/1:11,0:10:5.50:34,5,0	0/1:7,0:7:48.03:48,0,68	0/0:21,0:20:30.08:0,30,616	0/0:26,0:25:30.09:0,30,577	1/1:11,0:11:8.14:117,8,0	0/0:15,0:14:9.03:0,9,170	0/1:7,0:6:8.84:9,0,68	0/0:14,0:13:8.18:0,8,37	./.	0/1:25,0:26:3.60:4,0,30	0/0:19,1:17:3.01:0,3,36	./.	0/1:11,0:10:15.53:16,0,24	1/1:12,0:10:26.77:251,27,0	1/1:24,2:25:20.56:253,21,0	0/1:8,0:5:52.62:53,0,78
chr10	16478566	.	C	CAGAGAGAGAG	396.66	PASS	AB=1.000;AC=15;AF=0.300;AN=50;BaseQRankSum=3.893;DP=460;FS=6.754;HRun=0;HaplotypeScore=143.2250;InbreedingCoeff=0.0103;MQ=43.12;MQ0=25;MQRankSum=-2.175;QD=2.02;ReadPosRankSum=-2.512;VQSLOD=1.7393;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:72.21:0,72,2013	0/1:8,0:8:22.11:22,0,124	0/0:8,0:3:2.38:0,2,143	0/0:12,0:2:5.93:0,6,77	./.	1/1:15,0:14:5.88:177,6,0	1/1:17,0:14:3.03:29,3,0	0/1:17,0:14:2.51:3,0,264	0/1:18,0:16:98.24:98,0,275	0/0:19,0:17:18.87:0,19,999	1/1:20,0:21:0.47:1,0,0	0/0:19,0:19:33.11:0,33,1047	0/0:5,0:5:5.64:0,6,69	0/1:9,0:9:82.81:130,0,83	0/0:22,0:21:45.12:0,45,1330	0/0:29,0:28:45.12:0,45,1280	0/1:13,0:13:14.11:14,0,311	0/0:10,0:9:9.03:0,9,305	0/0:9,0:9:26.84:0,27,385	0/1:16,0:15:14.12:14,0,77	./.	0/0:22,0:21:3.01:0,3,62	./.	0/1:8,0:5:0:0,0,0	0/0:11,0:10:5.86:0,6,53	0/1:22,0:20:33.34:33,0,767	0/1:31,0:31:8.32:8,0,261	0/0:9,0:6:8.87:0,9,267
chr10	16478568	.	CACACAGAGAG	C	3060.09	PASS	AB=0.926;AC=18;AF=0.333;AN=54;BaseQRankSum=4.822;DP=466;FS=11.956;HRun=0;HaplotypeScore=132.6165;InbreedingCoeff=0.1133;MQ=45.10;MQ0=26;MQRankSum=-4.404;QD=13.60;ReadPosRankSum=2.559;VQSLOD=1.7041;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:71.46:0,71,1629	1/1:8,0:8:7.47:151,7,0	0/0:9,0:3:9:0,9,172	0/1:15,0:3:8.46:8,0,62	./.	0/1:15,0:14:71.80:72,0,87	0/0:15,0:12:3.01:0,3,78	0/1:18,0:15:33.74:34,0,237	0/1:19,0:17:32.04:32,0,225	1/1:17,4:19:54.15:1025,54,0	0/0:10,12:22:0:0,0,0	0/0:19,0:19:36.09:0,36,924	0/0:4,0:5:4.24:0,4,28	0/1:10,0:10:22.73:23,0,343	0/0:21,0:20:48.16:0,48,1384	0/0:27,0:26:42.12:0,42,1362	0/1:3,9:12:1.24:305,0,1	0/0:13,0:12:18.06:0,18,588	0/1:9,0:9:34.89:35,0,86	0/0:15,0:14:13.99:0,14,182	0/0:8,0:4:3.01:0,3,62	0/1:11,0:22:11.50:12,0,119	0/0:19,0:16:9.03:0,9,125	0/0:8,0:5:0:0,0,0	0/1:12,0:11:45.26:45,0,85	1/1:6,15:20:53.51:879,54,0	1/1:10,21:31:20.99:416,21,0	0/1:5,4:6:99:187,0,147
chr10	16478572	.	C	CAGAGAGAGAGAGAGAG	2313.48	PASS	AB=1.000;AC=29;AF=0.537;AN=54;BaseQRankSum=-5.936;DP=528;FS=2.877;HRun=0;HaplotypeScore=193.5808;InbreedingCoeff=0.6422;MQ=46.68;MQ0=27;MQRankSum=-1.217;QD=8.70;ReadPosRankSum=-6.782;VQSLOD=0.6203;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:54.19:0,54,2210	0/0:7,0:8:4.67:0,5,213	0/0:14,0:5:2.69:0,3,184	0/1:20,0:4:9.57:10,0,12	./.	1/1:17,0:16:7.14:266,7,0	1/1:21,0:18:12.48:240,12,0	1/1:27,0:21:31.30:766,31,0	1/1:19,0:17:7.43:262,7,0	0/0:17,0:21:42.14:0,42,1248	1/1:22,0:22:0.47:1,0,0	0/0:20,0:20:27.08:0,27,868	1/1:10,0:9:7.24:52,7,0	1/1:12,0:11:12.04:410,12,0	0/0:22,0:21:33.10:0,33,1138	0/0:28,0:27:30.10:0,30,1227	0/0:12,0:12:9.03:0,9,330	0/0:13,0:12:5.61:0,6,350	1/1:13,0:12:9.02:130,9,0	1/1:22,0:21:8.94:149,9,0	1/1:11,0:8:3.01:42,3,0	1/1:23,0:22:3.01:45,3,0	1/1:23,0:20:2.99:24,3,0	1/1:6,4:7:0.43:1,0,0	1/1:16,0:15:6:98,6,0	0/0:21,0:20:26.83:0,27,936	0/0:32,0:31:9.12:0,9,257	0/0:9,0:6:4.54:0,5,221
chr10	16479225	.	TTTTG	T	167.39	PASS	AB=0.981;AC=14;AF=0.259;AN=54;BaseQRankSum=9.946;DP=518;FS=57.096;HRun=0;HaplotypeScore=111.5343;InbreedingCoeff=-0.1218;MQ=44.61;MQ0=35;MQRankSum=-2.826;QD=0.73;ReadPosRankSum=8.078;VQSLOD=-0.7158;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:43:72.57:0,73,896	0/1:8,0:7:6.79:14,0,7	./.	0/0:8,0:6:12.08:0,12,78	0/0:22,0:21:24.91:0,25,171	0/1:20,0:19:11.40:11,0,240	0/0:26,0:25:13.30:0,13,302	0/1:23,1:22:5.78:6,0,283	0/1:11,0:11:7.98:8,0,143	0/0:20,0:18:5.73:0,6,117	0/0:9,0:9:17.34:0,17,112	0/0:15,0:14:7.12:0,7,263	0/1:15,0:15:25.84:26,0,136	0/1:17,1:17:52.79:53,0,138	0/0:22,0:20:52.16:0,52,545	0/0:24,0:24:59.92:0,60,668	0/1:36,0:28:22.87:23,0,67	0/0:24,0:19:52.33:0,52,721	0/1:10,1:11:27.63:28,0,103	0/0:15,0:13:14.14:0,14,225	0/0:13,0:12:24.24:0,24,150	0/0:19,0:18:19.95:0,20,194	0/1:16,1:16:44.47:44,0,125	0/1:23,0:19:27.53:28,0,69	0/0:18,0:18:16.31:0,16,199	0/1:23,0:23:18.68:19,0,116	1/1:18,0:16:17.15:58,17,0	0/1:5,0:3:2.25:2,0,18
chr10	16479877	.	T	TG	5820.10	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-0.876;DP=638;FS=20.188;HRun=3;HaplotypeScore=68.6798;InbreedingCoeff=0.9938;MQ=92.97;MQ0=0;MQRankSum=-1.929;QD=36.84;ReadPosRankSum=1.379;VQSLOD=2.9326;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,153,1836	1/1:1,13:14:30.10:420,30,0	0/0:30,0:30:60.90:0,61,920	0/0:25,0:25:69.12:0,69,770	1/1:3,21:24:60.16:807,60,0	0/0:17,0:17:51.16:0,51,612	0/0:28,0:28:78.24:0,78,933	0/0:38,0:38:99:0,105,1252	0/0:17,0:17:48.15:0,48,576	1/1:2,17:19:54.14:720,54,0	1/1:2,14:16:45.11:604,45,0	0/0:22,0:22:63.18:0,63,742	0/0:22,0:22:66.19:0,66,779	0/0:31,0:31:90.26:0,90,1068	0/0:9,0:9:27.07:0,27,313	0/0:15,0:15:36.11:0,36,432	1/1:2,29:31:54.41:1182,54,0	0/0:15,0:14:42.10:0,42,487	0/0:14,0:14:39.12:0,39,465	0/0:22,0:22:66.20:0,66,791	0/0:30,0:30:87.26:0,87,1033	0/0:20,0:20:51.14:0,51,601	0/0:20,0:20:54.14:0,54,624	0/0:31,0:31:84.23:0,84,984	0/0:22,0:22:60.18:0,60,720	1/1:0,29:29:87.29:1216,87,0	1/1:2,19:21:54.16:737,54,0	1/1:0,4:4:11.40:134,11,0
chr10	16481834	.	A	AT	5941.49	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-15.157;DP=487;FS=9.717;HRun=7;HaplotypeScore=41.8613;InbreedingCoeff=0.9688;MQ=68.54;MQ0=0;MQRankSum=0.855;QD=27.51;ReadPosRankSum=0.025;VQSLOD=4.7841;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:60.09:0,60,579	0/0:9,0:9:24.02:0,24,226	0/0:2,0:2:3:0,3,29	0/0:8,0:8:12:0,12,106	0/0:27,0:27:72.05:0,72,680	1/1:3,23:26:66.20:797,66,0	1/1:3,9:12:24.07:290,24,0	1/1:4,27:31:81.21:952,81,0	1/1:3,9:12:24.07:290,24,0	0/0:26,0:26:69.10:0,69,665	0/0:18,0:18:48.08:0,48,464	0/0:17,0:17:48.08:0,48,463	1/1:4,17:21:45.14:543,45,0	1/1:2,12:14:33.10:398,33,0	0/0:16,0:16:39.06:0,39,376	0/0:15,0:15:39.05:0,39,371	0/0:22,0:22:66.05:0,66,618	0/0:16,0:16:42.04:0,42,398	1/1:4,12:16:36.11:434,36,0	1/1:8,20:28:63.19:754,63,0	1/1:2,6:8:18.06:217,18,0	1/1:2,9:11:27.08:322,27,0	1/1:3,9:12:24.07:290,24,0	1/1:1,8:9:21.06:254,21,0	1/1:2,14:16:33.10:399,33,0	0/0:28,0:28:84.14:0,84,811	0/0:26,0:25:72.04:0,72,667	0/0:18,0:18:42.06:0,42,406
chr10	16484454	.	C	CAGT	29938.86	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=-5.809;DP=721;FS=8.093;HRun=0;HaplotypeScore=109.0729;InbreedingCoeff=0.9981;MQ=75.40;MQ0=0;MQRankSum=-8.467;QD=57.57;ReadPosRankSum=1.513;VQSLOD=6.8721;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:78.27:0,78,1330	1/1:1,5:6:18.06:398,18,0	0/0:37,0:37:99:0,102,1686	0/0:35,0:35:83.56:0,84,1308	1/1:1,17:18:42.14:968,42,0	1/1:1,29:30:84.29:1923,84,0	1/1:6,19:25:64.46:1453,64,0	1/1:9,28:39:99:2287,108,0	1/1:3,32:36:96.33:2211,96,0	1/1:5,21:26:72.23:1554,72,0	1/1:1,16:18:45.15:1035,45,0	0/0:24,0:24:69.22:0,69,1129	1/1:4,19:24:54.19:1242,54,0	1/1:3,25:29:78.27:1775,78,0	0/0:20,0:20:48.16:0,48,816	0/0:26,0:26:75.26:0,75,1268	1/1:0,30:31:72.25:1660,72,0	0/0:30,0:30:49.74:0,50,1432	1/1:2,21:23:66.18:1386,66,0	1/1:3,31:35:87.30:2000,87,0	1/1:5,32:37:78.27:1796,78,0	1/1:2,16:18:42.14:964,42,0	1/1:1,9:10:23.95:550,24,0	1/1:0,17:17:42.14:968,42,0	1/1:2,16:18:42.14:966,42,0	1/1:3,33:37:99:2398,108,0	1/1:8,22:31:69.01:1574,69,0	1/1:0,12:12:36.12:830,36,0
chr10	16484897	.	C	CT	2082.75	PASS	AB=0.681;AC=21;AF=0.375;AN=56;BaseQRankSum=-7.058;DP=309;FS=13.592;HRun=11;HaplotypeScore=34.7179;InbreedingCoeff=0.4975;MQ=73.79;MQ0=0;MQRankSum=1.105;QD=14.98;ReadPosRankSum=-1.858;VQSLOD=1.8576;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:68.60:0,69,524	0/0:4,0:4:5.96:0,6,46	0/1:7,0:8:15.34:15,0,15	0/0:6,0:5:2.83:0,3,26	0/0:16,0:17:15.59:0,16,251	1/1:2,10:12:27.05:274,27,0	0/1:4,12:16:10.40:268,0,10	1/1:6,20:26:53.97:497,54,0	1/1:2,3:5:8.99:83,9,0	0/0:9,0:9:26.83:0,27,203	0/0:9,0:9:23.40:0,23,170	0/0:4,0:5:14.55:0,15,103	0/1:1,1:3:21.07:22,0,21	0/1:3,5:8:8.21:107,0,8	0/0:11,0:11:32.84:0,33,249	0/0:9,0:9:23.91:0,24,186	0/0:17,0:18:49.85:0,50,377	0/0:16,0:19:44.85:0,45,307	1/1:5,5:10:12.02:122,12,0	0/1:4,7:11:1.31:162,0,1	0/1:5,7:12:5.20:134,0,5	1/1:1,6:7:18.04:183,18,0	1/1:2,2:4:6.01:61,6,0	0/1:3,7:10:2.20:162,0,2	1/1:1,6:6:18.04:183,18,0	0/0:13,0:13:35.83:0,36,275	0/0:15,0:15:35.82:0,36,274	0/0:6,0:6:11.83:0,12,85
chr10	16485010	.	G	GA	3590.62	PASS	AB=0.833;AC=26;AF=0.464;AN=56;BaseQRankSum=-10.103;DP=408;FS=31.242;HRun=10;HaplotypeScore=47.5402;InbreedingCoeff=0.8316;MQ=62.40;MQ0=11;MQRankSum=0.753;QD=19.20;ReadPosRankSum=-0.290;VQSLOD=2.0354;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:40:88.07:0,88,714	0/0:1,0:3:3.85:0,4,11	0/0:9,0:5:6.37:0,6,35	0/1:9,0:7:1.27:1,0,22	0/0:1,0:10:18.11:0,18,52	1/1:1,20:21:26.48:487,26,0	1/1:2,13:13:30.08:320,30,0	1/1:9,17:25:26.81:478,27,0	1/1:0,10:10:15.03:154,15,0	0/0:4,0:12:14.25:0,14,41	0/0:2,0:5:9.70:0,10,28	0/0:10,0:10:23.92:0,24,197	0/1:3,3:6:12.67:70,0,13	1/1:1,11:12:21.05:224,21,0	0/0:10,0:9:23.97:0,24,197	0/0:10,0:10:23.96:0,24,197	0/0:4,0:23:31.31:0,31,95	0/0:25,1:25:27.90:0,28,430	1/1:10,12:21:35.70:382,36,0	1/1:1,3:4:9.02:96,9,0	1/1:4,9:10:24.06:255,24,0	1/1:3,7:10:18.04:189,18,0	1/1:1,8:9:20.96:198,21,0	1/1:2,15:17:42.11:448,42,0	1/1:3,9:12:27.07:288,27,0	0/0:3,0:23:43.25:0,43,125	0/0:0,0:10:18.33:0,18,53	0/0:3,0:21:26.48:0,26,76
chr10	16486340	.	CA	C	2542.39	PASS	AB=0.714;AC=25;AF=0.446;AN=56;BaseQRankSum=8.303;DP=520;FS=12.147;HRun=13;HaplotypeScore=73.4053;InbreedingCoeff=0.5879;MQ=77.73;MQ0=4;MQRankSum=-1.415;QD=9.97;ReadPosRankSum=3.650;VQSLOD=1.7817;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,2:42:79.86:0,80,880	0/0:8,0:8:21.03:0,21,200	0/0:33,0:20:1.23:0,1,92	0/0:32,1:22:4.66:0,5,168	0/1:16,2:18:13.85:14,0,180	1/1:4,12:18:0.12:172,0,0	1/1:4,18:24:47.35:355,47,0	1/1:5,15:21:46.70:328,47,0	1/1:3,9:12:17.85:131,18,0	0/0:11,0:11:14.94:0,15,133	0/0:10,0:10:18.02:0,18,171	0/0:23,0:23:50.92:0,51,444	1/1:3,12:15:20.44:153,20,0	0/1:5,9:15:3.31:133,0,3	0/0:14,0:15:31.11:0,31,271	0/1:13,2:15:4.78:5,0,273	0/0:16,1:18:29.01:0,29,430	0/0:21,1:22:50.96:0,51,469	1/1:8,9:18:8.50:210,8,0	0/1:7,16:24:8.30:187,0,8	1/1:6,10:17:28.85:203,29,0	1/1:0,7:7:14.90:109,15,0	0/1:5,10:15:28.58:145,0,29	1/1:1,15:16:41.75:306,42,0	1/1:6,13:20:40.76:290,41,0	0/0:22,1:24:16.95:0,17,298	0/0:14,0:19:41.72:0,42,370	0/0:6,0:6:18.02:0,18,169
chr10	16487840	.	C	CACAG	11743.37	PASS	AB=0.635;AC=22;AF=0.393;AN=56;BaseQRankSum=-14.978;DP=714;FS=28.230;HRun=0;HaplotypeScore=113.7641;InbreedingCoeff=0.7178;MQ=62.59;MQ0=3;MQRankSum=2.003;QD=36.81;ReadPosRankSum=0.162;VQSLOD=2.6304;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:96.33:0,96,1551	0/0:7,0:7:15.05:0,15,242	0/0:43,0:29:38.11:0,38,519	0/0:36,0:33:29.99:0,30,439	0/0:23,0:23:48.16:0,48,776	1/1:8,19:28:2.70:1111,3,0	0/1:10,15:25:3.32:954,0,3	1/1:26,8:36:42.12:869,42,0	1/1:9,16:24:39.13:942,39,0	0/0:31,0:31:60.20:0,60,960	0/0:26,0:26:57.17:0,57,869	0/0:25,0:25:60.19:0,60,942	0/1:10,13:24:6.33:900,0,6	0/1:9,15:24:6.33:900,0,6	0/0:30,0:30:51.16:0,51,800	0/0:16,0:16:10.69:0,11,412	0/0:25,0:26:57.19:0,57,900	0/0:23,0:23:54.18:0,54,872	1/1:14,6:19:21.07:471,21,0	1/1:10,24:36:69.24:1629,69,0	1/1:11,8:20:18.06:435,18,0	0/1:6,6:12:30.37:344,0,30	1/1:6,9:15:21.07:506,21,0	1/1:9,20:29:54.19:1305,54,0	1/1:6,19:24:57.20:1377,57,0	0/0:30,0:30:75.25:0,75,1191	0/0:19,0:19:54.16:0,54,847	0/0:14,0:14:33.11:0,33,533
chr10	16488324	.	TGAGAGAGAGA	T	8326.10	PASS	AB=1.000;AC=27;AF=0.482;AN=56;BaseQRankSum=7.933;DP=625;FS=10.737;HRun=0;HaplotypeScore=209.6523;InbreedingCoeff=0.9070;MQ=65.68;MQ0=2;MQRankSum=-11.731;QD=27.66;ReadPosRankSum=2.031;VQSLOD=3.5235;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:23:21.05:0,21,745	0/0:9,0:9:15.05:0,15,668	0/1:16,0:10:0:0,0,0	0/0:24,0:10:3.01:0,3,49	0/0:32,0:39:56.40:0,56,2335	1/1:4,17:21:42.14:1178,42,0	1/1:9,11:21:27.09:791,27,0	1/1:28,7:35:10.92:318,11,0	1/1:7,11:19:27.09:791,27,0	0/0:13,0:16:27.09:0,27,1133	0/0:22,0:25:45.08:0,45,1674	0/0:13,0:23:36.12:0,36,1447	1/1:7,4:12:12.04:313,12,0	1/1:9,1:21:29.65:337,30,0	0/0:11,0:17:27.55:0,28,1099	0/0:16,0:28:42.14:0,42,1925	0/0:25,0:26:63.22:0,63,2762	0/0:11,0:22:39.05:0,39,1534	1/1:12,3:15:5.95:133,6,0	1/1:9,14:26:42.14:1201,42,0	1/1:7,5:12:6.49:181,6,0	1/1:8,11:21:36.12:1041,36,0	1/1:14,14:28:24.55:687,25,0	1/1:10,8:18:15.05:451,15,0	1/1:20,15:35:30.10:902,30,0	0/0:39,0:40:96.33:0,96,4105	0/0:21,0:25:45.14:0,45,1846	0/0:5,0:6:15.05:0,15,568
chr10	16488777	.	A	ATCTC	1557.85	PASS	AB=0.862;AC=25;AF=0.543;AN=46;BaseQRankSum=-3.579;DP=570;FS=15.807;HRun=0;HaplotypeScore=120.5787;InbreedingCoeff=0.4525;MQ=69.71;MQ0=33;MQRankSum=3.432;QD=5.54;ReadPosRankSum=-3.089;VQSLOD=0.2153;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:21:11.86:158,12,0	1/1:5,0:5:2.82:43,3,0	./.	./.	1/1:19,0:19:2.71:42,3,0	./.	0/1:23,0:23:0.08:0,0,0	./.	0/0:19,0:19:23.99:0,24,215	1/1:16,0:22:21.93:288,22,0	1/1:16,0:15:8.37:63,8,0	1/1:16,7:24:9.88:179,10,0	0/0:24,0:23:5.89:0,6,56	0/0:10,0:10:4.33:0,4,23	0/1:20,4:31:14.64:164,0,15	1/1:11,0:17:2.68:12,3,0	1/1:12,7:21:15.13:299,15,0	1/1:19,0:22:9.65:153,10,0	0/0:25,0:24:1.20:0,1,25	0/0:13,0:13:3:0,3,28	./.	0/0:14,0:14:3.47:0,3,29	0/0:8,0:8:6.41:0,6,56	0/0:15,0:15:2.87:0,3,28	0/0:6,0:6:10.83:0,11,88	1/1:15,0:14:15.93:237,16,0	0/1:23,4:28:38.60:66,0,39	1/1:16,0:16:1.83:4,2,0
chr10	16488816	.	TCTCTCA	T	2996.37	PASS	AB=0.529;AC=25;AF=0.446;AN=56;BaseQRankSum=3.012;DP=544;FS=20.624;HRun=0;HaplotypeScore=105.8710;InbreedingCoeff=0.8032;MQ=69.61;MQ0=17;MQRankSum=-5.188;QD=13.08;ReadPosRankSum=2.449;VQSLOD=0.8978;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:29.82:0,30,434	0/0:10,0:10:20.26:0,20,400	0/0:32,0:19:47.22:0,47,532	0/0:44,0:21:0.07:0,0,348	0/0:15,0:15:34.97:0,35,520	1/1:17,0:17:26.87:209,27,0	1/1:2,27:29:5.81:68,6,0	1/1:19,0:18:43.77:359,44,0	1/1:1,19:20:24.08:581,24,0	0/0:25,0:25:69.06:0,69,1284	0/0:17,0:17:39.01:0,39,637	0/0:24,0:24:33.83:0,34,428	1/1:13,1:13:29.74:346,30,0	1/1:1,14:15:9.03:209,9,0	0/0:32,0:32:56.92:0,57,809	0/0:15,0:15:21.42:0,21,242	0/0:17,0:17:33.46:0,33,601	0/0:11,0:11:19.19:0,19,429	1/1:2,12:14:36.38:399,36,0	1/1:0,10:10:5.97:92,6,0	1/1:17,0:17:17.32:243,17,0	1/1:2,20:22:6.02:140,6,0	0/1:2,16:18:41.95:200,0,42	1/1:1,17:18:3.01:72,3,0	1/1:0,16:16:12.04:289,12,0	0/0:23,0:22:61.42:0,61,1078	0/0:22,0:22:42.92:0,43,790	0/0:8,0:8:13.22:0,13,100
chr10	16489006	.	AGAG	A	12060.91	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=19.753;DP=662;FS=1.321;HRun=0;HaplotypeScore=135.0075;InbreedingCoeff=0.9998;MQ=92.24;MQ0=0;MQRankSum=-6.697;QD=41.30;ReadPosRankSum=0.429;VQSLOD=6.0539;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,141,3150	0/0:9,0:9:27.09:0,27,599	0/0:30,0:30:78.06:0,78,1547	0/0:35,0:35:90.28:0,90,1880	0/0:25,0:25:75.26:0,75,1697	1/1:1,19:20:54.18:882,54,0	1/1:4,27:31:78.26:1250,78,0	1/1:6,30:36:87.29:1399,87,0	1/1:0,14:14:39.13:636,39,0	0/0:26,0:26:75.25:0,75,1636	0/0:20,0:20:57.20:0,57,1276	0/0:20,0:20:54.19:0,54,1224	1/1:1,22:22:66.22:1062,66,0	1/1:2,12:14:36.12:572,36,0	0/0:34,0:34:99:0,99,2242	0/0:18,0:18:51.18:0,51,1153	0/0:20,0:20:60.19:0,60,1314	0/0:20,0:20:57.15:0,57,1239	1/1:4,22:26:60.20:980,60,0	1/1:0,22:22:66.18:1050,66,0	1/1:1,18:19:39.13:637,39,0	1/1:1,19:20:51.17:832,51,0	1/1:2,17:19:54.14:852,54,0	1/1:0,26:26:56.95:931,57,0	1/1:2,20:22:60.20:978,60,0	0/0:27,0:27:78.27:0,78,1730	0/0:23,0:23:69.24:0,69,1561	0/0:15,0:15:45.15:0,45,974
chr10	16489889	.	TG	T	8532.61	PASS	AB=1.000;AC=53;AF=0.946;AN=56;BaseQRankSum=1.049;DP=519;FS=4.190;HRun=1;HaplotypeScore=82.9665;InbreedingCoeff=0.3620;MQ=47.62;MQ0=31;MQRankSum=-1.214;QD=17.17;ReadPosRankSum=2.966;VQSLOD=5.3864;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:31,0:31:53.97:370,54,0	1/1:10,0:10:17.53:92,18,0	0/0:22,0:1:0.47:0,0,1	0/1:37,0:5:1.25:37,0,1	1/1:22,0:21:48.48:262,48,0	1/1:1,17:18:45.14:540,45,0	1/1:0,10:10:27.08:323,27,0	1/1:2,9:11:27.01:285,27,0	1/1:0,19:19:42.13:503,42,0	1/1:16,0:16:42.99:198,43,0	1/1:13,0:13:23.02:134,23,0	1/1:12,0:12:34.16:185,34,0	1/1:0,21:20:48.15:575,48,0	1/1:0,16:16:48.15:575,48,0	1/1:20,0:20:39.10:244,39,0	1/1:9,0:9:22.72:122,23,0	1/1:23,0:22:51.37:282,51,0	1/1:16,0:16:20.04:178,20,0	1/1:0,6:6:15.05:180,15,0	1/1:1,20:21:54.17:647,54,0	1/1:1,11:11:24.07:288,24,0	1/1:0,13:13:33.03:377,33,0	1/1:1,24:24:47.51:541,48,0	1/1:25,0:24:5.98:57,6,0	1/1:1,19:20:27.16:485,27,0	1/1:25,0:25:66.68:373,67,0	1/1:35,0:35:92.01:518,92,0	1/1:11,0:11:28.75:164,29,0
chr10	16489890	.	GC	G	13146.48	PASS	AB=1.000;AC=53;AF=0.946;AN=56;BaseQRankSum=-2.784;DP=521;FS=0.000;HRun=3;HaplotypeScore=66.2898;InbreedingCoeff=0.3135;MQ=47.31;MQ0=36;MQRankSum=-0.090;QD=26.35;ReadPosRankSum=1.921;VQSLOD=4.1323;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,30:30:78.24:958,78,0	1/1:0,10:10:18.53:224,19,0	0/0:22,0:1:0.47:0,0,1	0/1:37,0:5:14.16:14,0,29	1/1:0,22:21:51.16:620,51,0	1/1:18,0:18:45.14:540,45,0	1/1:10,0:10:27.08:323,27,0	1/1:12,0:10:25.85:268,26,0	1/1:19,0:19:42.13:503,42,0	1/1:0,16:16:48.15:595,48,0	1/1:0,13:13:24.08:297,24,0	1/1:0,12:12:36.11:446,36,0	1/1:22,0:20:48.15:575,48,0	1/1:16,0:16:48.15:575,48,0	1/1:1,19:20:57.18:706,57,0	1/1:0,9:9:24.08:297,24,0	1/1:0,23:22:54.17:665,54,0	1/1:2,15:16:39.12:483,39,0	1/1:6,0:6:15.05:180,15,0	1/1:21,0:21:54.16:647,54,0	1/1:12,0:11:24.07:288,24,0	1/1:13,0:13:33.03:377,33,0	1/1:24,0:23:47.51:534,48,0	1/1:0,25:24:6.02:73,6,0	1/1:20,0:20:27.92:486,28,0	1/1:0,25:25:75.22:916,75,0	1/1:0,35:35:96.30:1189,96,0	1/1:1,11:11:30.09:368,30,0
chr10	16490007	.	GCACACA	G	1811.32	PASS	AB=0.944;AC=32;AF=0.667;AN=48;BaseQRankSum=6.073;DP=525;FS=0.000;HRun=0;HaplotypeScore=183.9323;InbreedingCoeff=0.5449;MQ=60.85;MQ0=16;MQRankSum=-6.839;QD=6.29;ReadPosRankSum=0.198;VQSLOD=2.4202;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:26:39.13:0,39,942	0/1:7,0:6:0:0,0,0	./.	./.	1/1:20,0:24:10.01:118,10,0	1/1:3,5:8:3.01:61,3,0	1/1:18,2:20:2.61:35,3,0	./.	1/1:7,4:11:6.02:121,6,0	1/1:16,0:21:6.02:84,6,0	1/1:4,0:6:2.99:24,3,0	0/0:19,0:19:24.08:0,24,650	1/1:14,1:16:0.88:2,1,0	1/1:11,2:14:12.04:224,12,0	0/0:19,0:22:45.14:0,45,1065	0/0:14,0:15:18.06:0,18,430	1/1:21,0:25:12.04:168,12,0	0/0:30,0:30:40.02:0,40,1117	1/1:12,0:13:3.01:42,3,0	1/1:16,7:23:9.50:152,9,0	0/0:12,3:14:0:0,0,0	1/1:13,0:15:6.02:87,6,0	./.	0/0:24,4:26:3.01:0,3,78	1/1:15,5:22:18.06:310,18,0	1/1:22,0:30:0.04:263,0,0	1/1:13,0:23:17.74:244,18,0	0/1:7,0:7:32.86:33,0,75
chr10	16490412	.	G	GCA	19688.84	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=-13.890;DP=633;FS=4.540;HRun=0;HaplotypeScore=69.2049;InbreedingCoeff=0.9984;MQ=86.93;MQ0=3;MQRankSum=-6.591;QD=43.18;ReadPosRankSum=1.515;VQSLOD=6.3222;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:78.26:0,78,1054	1/1:1,7:8:21.07:368,21,0	0/0:25,0:24:66.21:0,66,870	0/0:22,0:22:59.76:0,60,761	1/1:1,11:12:30.10:524,30,0	1/1:1,17:20:51.17:891,51,0	1/1:2,29:31:75.26:1303,75,0	1/1:4,20:24:60.19:1025,60,0	1/1:2,17:20:42.14:736,42,0	1/1:1,21:23:63.21:1088,63,0	1/1:0,14:14:36.12:630,36,0	0/0:29,0:29:81.27:0,81,1096	1/1:2,27:29:78.26:1342,78,0	1/1:1,22:22:22.62:1011,23,0	0/0:28,0:28:81.27:0,81,1093	0/0:18,0:18:54.16:0,54,714	1/1:2,27:29:75.26:1315,75,0	0/0:27,0:26:72.20:0,72,953	1/1:5,15:21:51.14:815,51,0	1/1:2,13:17:36.12:630,36,0	1/1:3,48:51:99:2051,117,0	1/1:1,12:14:36.12:630,36,0	1/1:1,12:13:27.09:472,27,0	1/1:4,32:37:81.28:1420,81,0	1/1:0,13:13:39.13:684,39,0	1/1:0,19:19:57.19:984,57,0	1/1:1,20:22:57.19:980,57,0	1/1:0,16:16:45.15:788,45,0
chr10	16490693	.	CACGTGACTTCTT	C	20322.85	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=15.123;DP=515;FS=5.848;HRun=0;HaplotypeScore=191.9570;InbreedingCoeff=0.9206;MQ=70.23;MQ0=0;MQRankSum=-14.661;QD=61.03;ReadPosRankSum=2.234;VQSLOD=4.3869;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,126,7086	1/1:0,3:3:6.02:214,6,0	0/0:17,0:17:33.07:0,33,1325	0/0:21,0:21:42.11:0,42,1888	1/1:2,10:12:27.09:961,27,0	1/1:4,17:21:45.15:1602,45,0	1/1:10,13:23:30.10:1068,30,0	1/1:11,7:18:21.07:681,21,0	1/1:9,14:23:39.13:1388,39,0	1/1:3,12:15:33.11:1174,33,0	1/1:5,15:20:42.14:1495,42,0	0/0:26,0:26:69.24:0,69,3951	1/1:11,15:26:42.14:1495,42,0	1/1:4,10:14:30.10:1068,30,0	0/0:21,0:21:51.17:0,51,2637	0/0:23,0:23:60.21:0,60,3297	1/1:6,8:14:15.05:534,15,0	0/0:27,0:27:54.14:0,54,2690	1/1:7,8:15:24.06:656,24,0	1/1:2,7:9:18.06:641,18,0	1/1:15,5:20:1.29:104,1,0	1/1:0,4:4:9.03:320,9,0	1/1:1,12:13:33.11:1175,33,0	1/1:8,7:15:12.04:427,12,0	1/1:2,19:21:48.16:1709,48,0	1/1:3,14:17:42.14:1478,42,0	1/1:6,16:22:39.13:1388,39,0	1/1:1,7:8:21.07:748,21,0
chr10	16492674	.	CCTGCCTGCCTGA	C	3444.64	PASS	AC=34;AF=0.708;AN=48;BaseQRankSum=1.058;DP=389;FS=6.493;HRun=0;HaplotypeScore=91.0443;InbreedingCoeff=0.6415;MQ=49.95;MQ0=27;MQRankSum=-4.414;QD=14.85;ReadPosRankSum=-0.460;VQSLOD=0.6162;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:7:9.64:0,10,290	./.	0/0:45,0:9:1.30:0,1,45	0/0:32,0:8:2.65:0,3,25	1/1:2,0:2:3:25,3,0	1/1:4,13:16:6.02:213,6,0	1/1:29,0:28:62.51:573,63,0	1/1:3,0:3:3.88:26,4,0	1/1:1,19:20:11.55:428,12,0	1/1:6,4:10:11.01:156,11,0	1/1:1,0:1:3:25,3,0	0/0:14,0:14:33.02:0,33,810	1/1:1,10:11:3.01:108,3,0	1/1:3,16:19:9.89:325,10,0	0/0:8,0:8:21.02:0,21,534	0/0:7,0:7:21.03:0,21,718	1/1:6,27:33:5.78:125,6,0	0/0:34,0:33:68.09:0,68,3319	1/1:6,0:3:4.07:12,4,0	1/1:2,0:2:2.04:6,2,0	1/1:25,1:26:42.32:394,42,0	./.	./.	1/1:18,5:23:17.16:490,17,0	1/1:9,0:7:5.97:70,6,0	1/1:6,0:5:6.73:37,7,0	1/1:4,11:15:11.60:431,12,0	./.
chr10	16494112	.	CAGAAAGAA	C	1889.42	PASS	AB=1.000;AC=22;AF=0.579;AN=38;BaseQRankSum=-3.114;DP=412;FS=2.390;HRun=0;HaplotypeScore=55.1951;InbreedingCoeff=0.4533;MQ=22.22;MQ0=184;MQRankSum=-1.432;QD=8.47;ReadPosRankSum=0.849;VQSLOD=1.1409;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:14,0:4:13.04:14,0,13	0/0:5,0:4:2.84:0,3,14	./.	./.	1/1:27,1:23:4.97:135,5,0	./.	1/1:14,0:2:3.01:57,3,0	0/0:19,0:1:0:0,0,0	./.	1/1:19,0:13:21.07:449,21,0	1/1:9,1:7:6.02:89,6,0	1/1:16,0:11:3.01:74,3,0	0/0:26,0:7:2.74:0,3,90	0/0:13,0:5:3.01:0,3,77	1/1:14,10:20:12.04:288,12,0	1/1:8,6:10:6.02:148,6,0	./.	0/1:12,0:3:33.18:66,0,33	./.	0/0:24,0:23:22.53:0,23,171	./.	0/0:19,0:16:11.99:0,12,150	0/0:20,0:14:12.92:0,13,170	./.	1/1:26,1:19:15:272,15,0	1/1:22,1:13:15.05:353,15,0	1/1:21,1:11:5.99:84,6,0	./.
chr10	16494247	.	AGAAGGAAGGAAG	A	4956.45	PASS	AB=1.000;AC=29;AF=0.580;AN=50;BaseQRankSum=7.325;DP=423;FS=44.434;HRun=0;HaplotypeScore=113.7673;InbreedingCoeff=0.3741;MQ=33.20;MQ0=76;MQRankSum=-7.336;QD=21.83;ReadPosRankSum=-0.251;VQSLOD=1.9107;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:51.18:0,51,2543	1/1:8,0:8:0.95:145,1,0	0/0:14,0:1:1.25:0,1,3	0/0:16,0:2:6.02:0,6,140	0/1:28,0:26:68.82:412,0,69	1/1:0,2:2:3.01:106,3,0	1/1:14,1:11:12.04:306,12,0	./.	1/1:4,2:4:6.02:165,6,0	0/1:25,0:21:43.05:256,0,43	0/1:12,0:12:2.80:307,0,3	0/0:9,0:29:9.01:0,9,418	1/1:4,2:6:6.02:210,6,0	./.	0/0:39,0:30:87.30:0,87,3310	0/0:23,0:20:57.20:0,57,2325	./.	0/0:22,0:15:33.11:0,33,1733	1/1:9,0:1:3.01:113,3,0	1/1:9,18:27:33.11:887,33,0	1/1:7,0:5:6.02:123,6,0	1/1:3,12:13:15.01:397,15,0	1/1:9,5:14:15.05:398,15,0	1/1:4,0:3:3.01:96,3,0	1/1:7,17:24:24.08:748,24,0	0/1:19,0:14:64.73:151,0,65	0/0:6,0:5:6.02:0,6,79	0/1:6,0:6:25.49:137,0,25
chr10	16494253	.	AAGGAAG	A	1618.54	PASS	AB=0.897;AC=20;AF=0.385;AN=52;BaseQRankSum=9.058;DP=420;FS=32.368;HRun=0;HaplotypeScore=98.9031;InbreedingCoeff=-0.2755;MQ=34.62;MQ0=65;MQRankSum=-9.037;QD=7.39;ReadPosRankSum=4.365;VQSLOD=0.2816;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:66.23:0,66,2101	0/1:6,2:8:55.37:86,0,55	0/0:11,0:1:0.89:0,1,2	0/0:15,0:2:6.02:0,6,132	0/1:18,10:26:85.76:86,0,132	1/1:2,0:2:3.01:38,3,0	0/1:12,0:11:67.94:68,0,89	0/0:14,0:5:5.64:0,6,87	0/1:6,0:4:35.34:40,0,35	0/1:17,6:19:99:186,0,164	0/1:7,6:13:24:254,0,24	0/0:32,0:29:17.99:0,18,517	0/1:7,0:7:52.92:63,0,53	./.	0/0:44,0:35:99:0,105,3009	0/0:26,0:24:72.25:0,72,2148	./.	0/0:23,0:16:42.14:0,42,1351	1/1:8,0:1:3.01:35,3,0	0/1:24,0:24:99:212,0,127	0/1:6,0:4:13.43:13,0,28	0/1:15,0:13:70.37:107,0,70	0/1:15,0:15:37.36:88,0,37	1/1:3,0:2:2.90:16,3,0	0/1:24,0:24:86.24:209,0,86	0/1:14,5:14:95.19:184,0,95	0/0:4,1:4:9.01:0,9,83	0/1:4,2:6:13.69:85,0,14
chr10	16494267	.	G	GACA	127.11	PASS	AB=0.943;AC=8;AF=0.148;AN=54;BaseQRankSum=3.379;DP=423;FS=0.000;HRun=0;HaplotypeScore=95.5403;InbreedingCoeff=-0.0271;MQ=38.04;MQ0=31;MQRankSum=-4.462;QD=1.34;ReadPosRankSum=2.969;VQSLOD=1.4837;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:72.25:0,72,1315	0/0:8,0:8:24.01:0,24,284	0/0:12,0:2:3.79:0,4,18	0/0:16,0:5:12.04:0,12,205	0/0:28,0:27:43.90:0,44,610	0/0:2,0:2:2.88:0,3,15	0/1:15,1:16:41.30:41,0,310	0/0:17,0:11:30.09:0,30,500	0/0:4,0:4:5.93:0,6,70	0/1:19,1:17:23.71:24,0,225	0/0:15,0:15:36.02:0,36,461	0/0:30,0:30:26.55:0,27,403	0/0:9,0:9:12.49:0,12,170	./.	0/0:44,0:39:99:0,114,2123	0/0:31,0:29:87.30:0,87,1580	0/0:3,0:2:3.01:0,3,56	0/0:23,0:19:45.15:0,45,838	0/1:4,1:2:44.47:61,0,44	0/1:21,0:21:32.62:33,0,358	0/0:9,0:8:18.06:0,18,290	0/1:16,0:15:6.57:7,0,297	0/1:13,1:14:39.98:40,0,187	1/1:2,1:3:3.01:48,3,0	0/0:21,0:21:4.54:0,5,312	0/0:14,0:11:27.01:0,27,294	0/0:4,0:3:6.02:0,6,79	0/0:6,0:6:18.04:0,18,243
chr10	16494270	.	AGGAAG	A	852.35	PASS	AB=0.985;AC=20;AF=0.385;AN=52;BaseQRankSum=9.614;DP=426;FS=24.952;HRun=0;HaplotypeScore=104.5749;InbreedingCoeff=0.1309;MQ=38.67;MQ0=23;MQRankSum=-7.499;QD=4.96;ReadPosRankSum=6.716;VQSLOD=-0.2584;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:78.22:0,78,1929	1/1:7,0:7:2.46:68,2,0	0/0:13,0:3:3.90:0,4,43	0/0:15,0:6:16.78:0,17,206	0/0:24,3:26:2.89:0,3,85	1/1:2,0:2:3:29,3,0	0/1:19,0:19:4.98:5,0,344	0/0:19,0:14:42.01:0,42,517	1/1:4,0:4:0.51:25,1,0	1/1:17,1:16:6.96:121,7,0	0/1:13,2:15:10.45:117,0,10	0/0:31,0:31:30.10:0,30,580	0/1:10,0:10:38.63:39,0,148	./.	0/0:44,0:40:99:0,120,2696	0/0:32,0:30:90.31:0,90,2028	0/0:2,0:2:2.50:0,2,9	0/0:25,0:21:40.46:0,40,1252	0/1:6,0:3:5.21:5,0,74	0/1:20,0:20:99:132,0,168	0/0:9,0:8:20.50:0,21,254	0/1:17,0:16:57.11:57,0,207	0/1:13,0:13:40.95:41,0,71	0/0:3,0:3:4.56:0,5,45	0/1:22,0:22:99:135,0,173	1/1:11,2:11:15.08:170,15,0	./.	1/1:5,1:6:0.63:63,1,0
chr10	16494285	.	C	CAGGA	1525.53	PASS	AB=1.000;AC=22;AF=0.407;AN=54;BaseQRankSum=6.695;DP=481;FS=37.048;HRun=0;HaplotypeScore=121.6625;InbreedingCoeff=0.4646;MQ=39.77;MQ0=9;MQRankSum=-8.245;QD=8.87;ReadPosRankSum=-2.634;VQSLOD=1.0381;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:62.99:0,63,912	1/1:9,1:10:23.97:344,24,0	0/0:18,0:7:8.09:0,8,124	0/0:15,0:9:24.07:0,24,342	1/1:19,5:23:26.56:259,27,0	0/1:3,0:3:2.06:15,0,2	0/1:20,0:20:33.55:34,0,437	0/0:26,0:23:60.09:0,60,828	0/0:9,0:8:8.55:0,9,64	1/1:14,2:14:12.01:234,12,0	1/1:14,0:14:20.57:124,21,0	0/0:34,0:34:26.60:0,27,445	0/1:17,0:17:48.59:49,0,152	./.	0/0:46,0:46:99:0,105,1588	0/0:40,0:40:99:0,105,1666	1/1:0,2:2:3.01:71,3,0	0/0:19,0:19:51.94:0,52,744	0/0:6,0:4:5.38:0,5,48	0/0:19,0:19:14.53:0,15,319	0/0:15,0:15:29.97:0,30,372	0/1:22,0:21:36.25:36,0,239	0/1:14,0:13:10.84:11,0,132	0/1:9,0:9:41.37:45,0,41	0/0:25,0:25:4.39:0,4,266	1/1:11,0:10:11.99:167,12,0	1/1:3,1:4:6.02:114,6,0	1/1:5,1:6:14.92:212,15,0
chr10	16494309	.	C	CACAG	4587.65	PASS	AB=0.976;AC=26;AF=0.481;AN=54;BaseQRankSum=4.543;DP=516;FS=29.064;HRun=0;HaplotypeScore=124.0322;InbreedingCoeff=0.0346;MQ=42.41;MQ0=7;MQRankSum=-3.174;QD=15.29;ReadPosRankSum=-0.173;VQSLOD=2.1985;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:27:63.21:0,63,1000	1/1:7,3:10:18.53:394,19,0	0/0:19,0:10:21.05:0,21,307	0/0:15,0:9:15.89:0,16,219	1/1:16,0:16:11.21:188,11,0	0/1:10,0:10:40.49:40,0,274	0/1:37,0:37:99:448,0,689	0/1:40,0:34:99:629,0,212	0/1:13,0:12:85.45:85,0,92	1/1:12,1:12:21.01:319,21,0	./.	0/0:31,0:31:44.24:0,44,789	0/1:25,1:26:99:164,0,412	0/0:10,0:10:6.02:0,6,103	0/0:42,0:42:99:0,102,1508	0/0:41,0:40:99:0,102,1550	1/1:3,0:3:2.99:24,3,0	0/0:20,0:20:42.10:0,42,682	0/1:6,0:6:31.62:175,0,32	0/1:17,1:18:99:376,0,105	0/1:23,0:23:99:271,0,346	0/1:20,1:21:99:418,0,103	0/1:13,1:13:99:192,0,114	0/1:11,0:11:5.80:6,0,211	0/1:18,2:20:29.05:377,0,29	1/1:8,0:7:8.39:120,8,0	1/1:6,1:7:12.04:287,12,0	1/1:3,1:4:3.01:75,3,0
chr10	16494313	.	GACAGACAGGAAGGAAGGAAGGAAGGAAGGCAGGC	G	3056.75	PASS	AB=0.981;AC=18;AF=0.321;AN=56;BaseQRankSum=0.925;DP=528;FS=27.401;HRun=0;HaplotypeScore=384.7960;InbreedingCoeff=-0.3558;MQ=42.52;MQ0=7;MQRankSum=-1.672;QD=10.36;ReadPosRankSum=-1.850;VQSLOD=0.9572;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:27:69.23:0,69,3076	0/1:8,0:8:73.61:74,0,309	0/0:21,0:10:22:0,22,558	0/0:16,0:9:15.89:0,16,294	0/1:17,0:16:58.19:58,0,135	0/0:9,0:9:23.75:0,24,961	0/1:37,0:37:99:396,0,2178	0/1:26,19:39:99:687,0,1277	0/1:13,0:12:24.86:25,0,377	0/1:14,0:13:99:121,0,601	1/1:6,0:6:4.56:49,5,0	0/0:31,0:31:54.12:0,54,2538	0/1:26,0:26:70.42:70,0,1449	0/0:11,0:11:6.02:0,6,351	0/0:42,0:42:99:0,102,3064	0/0:43,0:42:99:0,108,4003	0/1:6,0:6:12.44:12,0,86	0/0:20,0:20:45.11:0,45,2387	0/1:8,0:8:99:109,0,226	0/1:16,0:16:99:335,0,385	0/1:25,0:25:99:266,0,1204	0/1:19,0:19:99:411,0,282	0/1:16,0:13:99:188,0,359	0/1:11,0:11:5.79:6,0,658	0/1:18,0:18:99:345,0,333	0/1:10,0:10:64.38:64,0,311	0/0:9,0:9:17.99:0,18,458	0/0:3,0:3:2.59:0,3,80
chr10	16494319	.	C	CAGACAGGA	4867	PASS	AB=0.926;AC=23;AF=0.411;AN=56;BaseQRankSum=2.907;DP=516;FS=31.452;HRun=0;HaplotypeScore=150.4123;InbreedingCoeff=-0.3043;MQ=42.74;MQ0=8;MQRankSum=-3.398;QD=15.31;ReadPosRankSum=-2.095;VQSLOD=2.1549;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:24:69.23:0,69,1546	1/1:8,0:8:18.50:209,19,0	0/0:16,0:8:21.05:0,21,452	0/0:14,0:8:18.90:0,19,298	0/1:18,0:17:56.54:123,0,57	0/1:8,2:10:99:111,0,456	0/1:33,3:36:99:645,0,1181	0/1:45,0:38:99:763,0,758	0/1:9,4:11:99:158,0,160	0/1:15,0:14:99:180,0,150	1/1:7,0:7:0.89:2,1,0	0/0:30,0:30:54.08:0,54,1299	0/1:23,2:26:99:225,0,730	0/0:12,0:12:6.02:0,6,172	0/0:42,0:41:99:0,102,1879	0/0:41,0:40:99:0,108,2213	0/1:6,0:6:12.33:12,0,91	0/0:17,0:17:45.11:0,45,1093	0/1:4,5:9:99:238,0,189	0/1:13,1:14:99:468,0,174	0/1:25,0:24:99:265,0,645	0/1:17,1:18:99:544,0,155	0/1:16,1:14:99:182,0,247	0/1:10,1:11:5.80:6,0,350	0/1:17,1:18:66.15:480,0,66	0/1:10,0:10:81.81:82,0,199	0/1:9,0:9:57.16:84,0,57	1/1:3,0:3:8.98:91,9,0
chr10	16494357	.	CAGGAAGGA	C	431.32	PASS	AB=0.927;AC=12;AF=0.429;AN=28;BaseQRankSum=-1.049;DP=371;FS=0.000;HRun=0;HaplotypeScore=93.8479;InbreedingCoeff=0.0954;MQ=35.16;MQ0=42;MQRankSum=1.927;QD=3.82;ReadPosRankSum=2.708;VQSLOD=1.4837;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:19,3:19:5.95:93,6,0	./.	./.	./.	0/1:6,0:6:0:0,0,0	0/0:9,0:8:3.01:0,3,34	0/1:24,0:24:30.86:50,0,31	0/0:49,0:31:2.98:0,3,21	./.	0/0:14,0:12:8.99:0,9,309	./.	1/1:19,0:18:5.02:91,5,0	./.	./.	./.	./.	0/1:8,0:9:82.45:82,0,258	0/1:12,2:14:30.96:159,0,31	./.	./.	./.	0/0:10,0:7:3.01:0,3,72	1/1:10,0:8:0.72:2,1,0	./.	0/0:8,0:8:3.01:0,3,38	0/0:8,0:8:3.01:0,3,100	1/1:7,0:8:3.01:56,3,0	./.
chr10	16494419	.	CAGGAAGGAAGGAAGGA	C	1749.72	PASS	AB=0.713;AC=17;AF=0.386;AN=44;BaseQRankSum=4.675;DP=335;FS=7.589;HRun=0;HaplotypeScore=96.8065;InbreedingCoeff=0.4447;MQ=38.86;MQ0=36;MQRankSum=-3.686;QD=16.35;ReadPosRankSum=1.114;VQSLOD=1.2516;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:19:39.13:0,39,1921	0/0:0,0:1:3.01:0,3,49	./.	./.	0/0:5,0:6:15.01:0,15,274	1/1:0,5:5:14.98:453,15,0	1/1:2,15:15:2.75:133,3,0	0/1:19,11:14:99:298,0,207	1/1:0,8:6:6.02:169,6,0	0/0:4,0:4:9.03:0,9,163	0/0:2,0:4:3.01:0,3,124	0/0:37,0:34:87.23:0,87,5316	1/1:0,5:4:6.02:266,6,0	1/1:0,7:7:3.01:133,3,0	0/0:34,0:28:54.10:0,54,3378	0/0:24,0:22:54.19:0,54,3436	./.	0/0:19,0:18:45.15:0,45,2915	0/1:7,2:5:99:127,0,144	./.	0/1:6,14:19:44.71:45,0,149	./.	1/1:3,0:1:2.68:11,3,0	0/0:0,9:9:0.47:0,0,1	1/1:0,3:3:6.02:266,6,0	0/0:0,0:9:21.07:0,21,428	0/0:5,0:11:27.06:0,27,436	./.
chr10	16494532	.	AGTAT	A	7620.97	PASS	AB=1.000;AC=44;AF=0.815;AN=54;BaseQRankSum=-10.814;DP=504;FS=10.644;HRun=0;HaplotypeScore=168.6321;InbreedingCoeff=-0.0536;MQ=46.19;MQ0=2;MQRankSum=4.509;QD=15.36;ReadPosRankSum=-8.870;VQSLOD=1.0532;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:24:18.10:431,18,0	0/1:5,0:5:2.74:130,0,3	1/1:3,0:2:2.99:23,3,0	0/0:7,0:5:2.66:0,3,12	1/1:15,0:15:5.40:134,5,0	1/1:8,4:12:30.10:474,30,0	1/1:10,6:16:45.12:619,45,0	1/1:19,0:17:41.53:490,42,0	1/1:19,0:19:38.60:305,39,0	1/1:22,0:22:12.40:350,12,0	1/1:3,0:2:5.98:53,6,0	0/1:24,0:24:21.93:334,0,22	0/1:28,0:28:4.76:362,0,5	1/1:28,0:28:17.18:475,17,0	0/1:36,0:35:62.02:499,0,62	0/1:49,0:48:31.45:751,0,31	0/1:13,0:13:0.59:85,0,1	1/1:23,0:22:26.97:335,27,0	1/1:15,0:14:34.42:330,34,0	1/1:15,0:14:20.51:160,21,0	1/1:19,0:18:11.55:171,12,0	0/1:16,0:16:35.88:125,0,36	1/1:21,1:22:17.67:199,18,0	1/1:19,0:19:22.95:176,23,0	1/1:27,0:25:43.33:290,43,0	0/1:15,0:13:2.96:210,0,3	1/1:7,0:7:2.42:110,2,0	./.
chr10	16494545	.	G	GGAA	10973.38	PASS	AB=1.000;AC=55;AF=0.982;AN=56;BaseQRankSum=-2.669;DP=528;FS=7.737;HRun=0;HaplotypeScore=157.5276;InbreedingCoeff=0.0243;MQ=48.08;MQ0=1;MQRankSum=-0.972;QD=20.78;ReadPosRankSum=0.475;VQSLOD=4.4141;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:18,7:24:58.89:768,59,0	1/1:6,0:6:15.76:141,16,0	1/1:5,0:4:5.81:45,6,0	0/1:16,0:11:41.90:130,0,42	1/1:15,3:18:19.62:204,20,0	1/1:14,0:14:30.33:199,30,0	1/1:14,0:14:21.42:187,21,0	1/1:28,0:27:74.59:580,75,0	1/1:20,0:17:30.05:309,30,0	1/1:17,4:21:41.70:512,42,0	1/1:5,1:5:12.26:60,12,0	1/1:19,9:28:70.80:962,71,0	1/1:27,0:26:45.70:456,46,0	1/1:29,0:29:46.63:330,47,0	1/1:17,15:31:86.22:1451,86,0	1/1:25,17:41:99:1562,113,0	1/1:11,3:14:23.56:281,24,0	1/1:19,2:21:45.02:543,45,0	1/1:13,0:13:35.88:342,36,0	1/1:19,0:18:28.31:189,28,0	1/1:18,0:17:35.13:293,35,0	1/1:18,0:17:24.66:179,25,0	1/1:26,0:25:35.44:235,35,0	1/1:21,0:21:28.54:185,29,0	1/1:25,0:23:44.13:395,44,0	1/1:12,3:12:25.37:262,25,0	1/1:4,2:5:12.33:160,12,0	1/1:1,0:1:2.68:11,3,0
chr10	16495869	.	ATT	A	6832.08	PASS	AB=0.744;AC=26;AF=0.464;AN=56;BaseQRankSum=-1.501;DP=561;FS=0.335;HRun=10;HaplotypeScore=88.8908;InbreedingCoeff=0.8635;MQ=71.21;MQ0=2;MQRankSum=-2.987;QD=25.12;ReadPosRankSum=0.775;VQSLOD=4.7113;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:23:62.69:0,63,934	0/0:0,0:4:9.86:0,10,34	0/0:6,0:6:17.79:0,18,188	0/1:9,0:11:10.43:10,0,36	0/0:2,0:31:75.68:0,76,280	1/1:2,28:30:72.17:803,72,0	1/1:2,24:26:57.15:635,57,0	1/1:6,32:38:96.14:1030,96,0	0/1:4,12:15:5.38:383,0,5	0/0:5,0:20:42.60:0,43,148	0/0:0,0:14:33.38:0,33,134	0/0:35,0:36:95.76:0,96,1376	1/1:1,14:14:33.07:368,33,0	1/1:2,7:9:14.97:226,15,0	0/0:21,0:21:57.19:0,57,884	0/0:21,0:21:51.16:0,51,787	0/0:7,0:24:51.50:0,51,209	0/0:29,0:32:85.73:0,86,1220	1/1:3,18:21:51.12:568,51,0	1/1:2,13:15:33.06:368,33,0	1/1:3,19:22:51.13:569,51,0	1/1:2,13:15:33.06:368,33,0	1/1:0,20:20:60.16:669,60,0	1/1:2,6:8:18.04:201,18,0	1/1:0,25:24:57.13:635,57,0	0/0:3,0:20:42.42:0,42,146	0/0:6,0:27:55.90:0,56,222	0/0:5,0:10:12.48:0,12,43
chr10	16495947	.	AAAAG	A	4142.74	PASS	AB=0.987;AC=37;AF=0.661;AN=56;BaseQRankSum=12.727;DP=568;FS=30.415;HRun=0;HaplotypeScore=162.9548;InbreedingCoeff=0.6020;MQ=74.97;MQ0=0;MQRankSum=-5.229;QD=10.23;ReadPosRankSum=3.092;VQSLOD=1.5104;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:81.24:0,81,1901	1/1:8,0:8:14.09:70,14,0	0/0:20,0:18:32.92:0,33,496	0/0:19,0:17:42.66:0,43,569	1/1:30,0:30:31.54:267,32,0	1/1:22,1:23:35.52:271,36,0	0/1:25,0:25:16.16:142,0,16	0/1:33,1:34:46.63:338,0,47	1/1:19,0:19:34.22:170,34,0	1/1:23,0:23:64.74:331,65,0	1/1:10,1:11:20.82:169,21,0	0/0:25,0:25:69.22:0,69,1629	1/1:16,1:17:11.36:188,11,0	1/1:13,0:13:22.96:119,23,0	0/0:21,0:21:54.17:0,54,1269	0/0:27,0:27:62.54:0,63,1654	1/1:17,0:17:39.81:216,40,0	0/0:23,0:22:66.09:0,66,1465	0/1:25,1:25:32.28:254,0,32	1/1:16,0:16:33.69:172,34,0	1/1:12,0:12:11.04:149,11,0	0/1:13,0:13:16.16:91,0,16	1/1:16,0:16:17.14:137,17,0	1/1:20,1:21:19.22:223,19,0	1/1:30,0:30:54.30:304,54,0	1/1:17,0:17:37.29:208,37,0	1/1:28,0:28:58.49:266,58,0	0/1:6,0:6:6.55:55,0,7
chr10	16495948	.	AAAG	A	13668.46	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=11.421;DP=568;FS=29.379;HRun=0;HaplotypeScore=119.8070;InbreedingCoeff=0.9933;MQ=75.68;MQ0=0;MQRankSum=-2.888;QD=33.67;ReadPosRankSum=0.051;VQSLOD=3.1917;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:81.18:0,81,1531	1/1:0,8:8:15:197,15,0	0/0:21,0:19:24.81:0,25,354	0/0:19,0:17:30.30:0,30,370	1/1:11,20:31:72.13:951,72,0	1/1:7,16:23:68.51:869,69,0	1/1:2,23:25:45.15:669,45,0	1/1:7,26:33:81.11:991,81,0	1/1:2,17:19:45.14:650,45,0	1/1:0,23:23:69.20:970,69,0	1/1:4,7:11:32.61:388,33,0	0/0:26,0:26:72.21:0,72,1331	1/1:7,10:17:45.08:605,45,0	1/1:2,11:13:29.77:406,30,0	0/0:20,0:20:54.16:0,54,1009	0/0:24,1:25:30.84:0,31,1288	1/1:7,11:18:45.06:585,45,0	0/0:23,0:22:63.09:0,63,1148	1/1:14,13:26:63.13:821,63,0	1/1:4,10:14:36.07:492,36,0	1/1:3,9:12:30.04:379,30,0	1/1:5,8:13:30.10:444,30,0	1/1:5,11:16:39.08:534,39,0	1/1:2,19:21:51.63:742,52,0	1/1:11,20:31:92.59:1193,93,0	1/1:7,10:17:48.13:644,48,0	1/1:0,28:28:63.21:936,63,0	1/1:4,2:6:15.04:200,15,0
chr10	16495949	.	AAG	A	7153.32	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=13.540;DP=564;FS=34.338;HRun=0;HaplotypeScore=130.5047;InbreedingCoeff=0.9638;MQ=75.09;MQ0=0;MQRankSum=-6.242;QD=17.79;ReadPosRankSum=1.386;VQSLOD=2.6126;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:81.17:0,81,1256	1/1:8,0:8:14.88:105,15,0	0/0:19,0:17:23.23:0,23,236	0/0:20,0:18:28.29:0,28,325	1/1:29,0:29:69.95:511,70,0	1/1:21,2:23:62.29:495,62,0	1/1:25,0:25:7.61:284,8,0	1/1:33,0:33:18.01:505,18,0	1/1:19,0:19:42.61:302,43,0	1/1:23,0:23:68.62:506,69,0	1/1:11,0:11:32.36:220,32,0	0/0:26,0:26:75.08:0,75,1104	1/1:16,0:16:42.16:297,42,0	1/1:12,1:13:29.83:233,30,0	0/0:20,0:20:54.14:0,54,835	0/0:26,0:26:57.02:0,57,1111	1/1:16,0:16:44.76:333,45,0	0/0:23,0:22:63.11:0,63,959	1/1:27,0:26:7.55:405,8,0	1/1:15,0:15:38.76:287,39,0	1/1:12,0:12:29.83:222,30,0	1/1:11,1:12:29.82:223,30,0	1/1:16,0:16:38.73:279,39,0	1/1:21,0:21:30.58:341,31,0	1/1:30,2:32:90.47:707,90,0	1/1:17,0:17:46.35:344,46,0	1/1:28,0:28:62.56:449,63,0	1/1:6,0:6:14.87:107,15,0
chr10	16495953	.	AGAT	A	6190.01	PASS	AB=0.982;AC=39;AF=0.696;AN=56;BaseQRankSum=12.938;DP=544;FS=24.821;HRun=0;HaplotypeScore=140.1586;InbreedingCoeff=0.7787;MQ=73.54;MQ0=0;MQRankSum=-3.324;QD=16.16;ReadPosRankSum=2.564;VQSLOD=2.9978;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:84.25:0,84,1833	0/1:8,0:8:1.19:73,0,1	0/0:16,0:14:37.70:0,38,586	0/0:20,0:19:19.68:0,20,573	1/1:25,1:26:64.95:494,65,0	1/1:21,0:21:31.84:359,32,0	1/1:24,0:24:22.75:316,23,0	1/1:27,0:27:60.44:409,60,0	1/1:17,0:17:41.83:330,42,0	1/1:24,0:24:35.59:405,36,0	1/1:11,1:12:7.41:186,7,0	0/0:25,0:25:75.24:0,75,1628	0/1:17,1:18:4.11:244,0,4	1/1:13,0:13:15.38:207,15,0	0/0:21,0:21:60.15:0,60,1235	0/0:26,0:26:48.78:0,49,1556	0/1:19,0:19:19.45:203,0,19	0/0:24,0:23:63.19:0,63,1357	1/1:24,1:24:31.76:289,32,0	1/1:14,0:14:32.89:250,33,0	1/1:11,0:11:25.19:161,25,0	1/1:9,1:10:29.85:257,30,0	1/1:15,0:15:12.54:225,13,0	1/1:20,0:20:50.19:361,50,0	1/1:31,0:31:63.39:547,63,0	1/1:15,0:15:40.51:252,41,0	1/1:28,0:28:51.89:540,52,0	1/1:5,0:5:13.07:84,13,0
chr10	16496671	.	T	TAGTC	4841.34	PASS	AB=0.963;AC=34;AF=0.607;AN=56;BaseQRankSum=-5.508;DP=741;FS=0.000;HRun=0;HaplotypeScore=191.8322;InbreedingCoeff=0.3014;MQ=64.19;MQ0=6;MQRankSum=-1.954;QD=8.03;ReadPosRankSum=-7.427;VQSLOD=0.6187;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:20,17:39:21.07:497,21,0	1/1:8,0:8:11.95:127,12,0	0/0:19,0:18:8.96:0,9,68	0/0:19,0:14:2.96:0,3,19	1/1:1,0:20:11.97:129,12,0	0/0:21,0:21:34.67:0,35,334	0/1:37,0:36:93.53:94,0,287	1/1:43,0:41:17.47:154,17,0	0/1:21,0:21:17.57:18,0,215	1/1:29,0:31:44.80:470,45,0	1/1:0,1:18:11.95:136,12,0	1/1:13,18:32:33.11:780,33,0	0/0:34,0:34:43.66:0,44,599	0/0:35,0:35:15.91:0,16,463	0/1:11,14:26:16.83:608,0,17	1/1:13,11:29:18.06:426,18,0	0/1:20,0:20:1.74:161,0,2	1/1:6,13:20:12.04:284,12,0	0/1:26,0:23:7.65:8,0,134	0/1:25,0:25:24:24,0,343	0/1:64,0:64:31.61:32,0,679	0/1:28,0:28:11.56:12,0,246	0/1:14,0:13:3.07:3,0,148	0/1:29,0:29:1.11:1,0,344	0/0:10,0:10:17.53:0,18,153	1/1:2,0:24:27.06:405,27,0	1/1:2,0:32:20.78:351,21,0	1/1:17,0:17:14.84:124,15,0
chr10	16496848	.	AAG	A	15023.33	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=9.913;DP=734;FS=11.732;HRun=0;HaplotypeScore=101.9412;InbreedingCoeff=0.9976;MQ=74.52;MQ0=8;MQRankSum=-2.056;QD=29.06;ReadPosRankSum=4.686;VQSLOD=6.0314;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:78.13:0,78,1298	1/1:0,7:6:18.06:243,18,0	0/0:35,0:26:60.27:0,60,791	0/0:50,0:33:53.51:0,54,716	1/1:3,28:31:78:931,78,0	1/1:1,23:24:57.19:771,57,0	1/1:4,25:29:51.17:685,51,0	1/1:4,28:32:84.21:1097,84,0	1/1:4,16:19:33.11:446,33,0	1/1:2,34:36:99:1250,99,0	1/1:1,20:21:48.03:587,48,0	0/0:19,0:19:57.17:0,57,926	1/1:1,29:30:75.08:1010,75,0	1/1:2,30:32:63.21:850,63,0	0/0:29,0:29:72.25:0,72,1227	0/0:31,0:31:75.24:0,75,1269	1/1:0,23:23:53.98:730,54,0	0/0:23,0:23:60.59:0,61,938	1/1:1,20:21:60.15:749,60,0	1/1:2,27:29:75.04:907,75,0	1/1:1,21:22:42.14:568,42,0	1/1:2,33:35:69.19:913,69,0	1/1:2,16:17:30.10:406,30,0	1/1:3,22:25:47.90:649,48,0	1/1:3,18:21:33.11:446,33,0	1/1:3,26:28:74.92:973,75,0	1/1:2,15:17:39.13:527,39,0	1/1:0,15:15:21.07:284,21,0
chr10	16497320	.	A	AG	3860.84	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=17.322;DP=586;FS=16.515;HRun=0;HaplotypeScore=139.9534;InbreedingCoeff=0.9959;MQ=88.37;MQ0=3;MQRankSum=-16.221;QD=20.43;ReadPosRankSum=0.339;VQSLOD=3.6770;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:58:99:0,172,2351	0/0:14,0:14:42.14:0,42,586	0/0:31,0:31:66.61:0,67,1059	0/0:25,0:25:62.76:0,63,752	0/0:22,0:22:63.19:0,63,857	1/1:0,15:15:38.86:328,39,0	1/1:0,17:17:41.76:344,42,0	1/1:2,9:11:32.97:336,33,0	1/1:0,17:17:44.58:330,45,0	0/0:21,0:21:60.19:0,60,821	0/0:16,0:16:48.15:0,48,648	0/0:25,0:25:75.25:0,75,1049	1/1:2,17:19:56.73:477,57,0	1/1:1,16:16:43.40:414,43,0	0/0:38,0:38:99:0,114,1577	0/0:31,0:31:93.30:0,93,1283	0/0:42,0:42:99:0,126,1761	0/0:21,0:21:63.21:0,63,881	1/1:1,5:6:17.94:163,18,0	1/1:3,11:14:29.63:251,30,0	1/1:2,17:19:32.88:281,33,0	1/1:4,6:10:14.87:113,15,0	1/1:0,11:11:23.15:147,23,0	1/1:3,13:16:35.27:289,35,0	1/1:1,13:15:44.87:388,45,0	0/0:21,0:21:63.21:0,63,880	0/0:23,0:23:69.23:0,69,965	0/0:9,0:9:27.09:0,27,378
chr10	16497323	.	CTCT	C	4505	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=17.746;DP=579;FS=14.007;HRun=0;HaplotypeScore=155.4667;InbreedingCoeff=0.9944;MQ=86.95;MQ0=3;MQRankSum=-17.623;QD=25.03;ReadPosRankSum=2.918;VQSLOD=4.4631;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:59,0:59:99:0,172,4168	0/0:15,0:15:42.14:0,42,1009	0/0:30,0:30:87.13:0,87,1863	0/0:22,0:22:57.19:0,57,1327	0/0:22,0:22:63.20:0,63,1503	1/1:0,15:15:37.35:377,37,0	1/1:1,16:17:39.05:429,39,0	1/1:2,9:11:27.07:295,27,0	1/1:0,17:17:45.12:486,45,0	0/0:23,0:23:66.23:0,66,1575	0/0:16,0:16:48.16:0,48,1182	0/0:26,0:26:78.27:0,78,1896	1/1:1,17:18:51.11:556,51,0	1/1:1,15:15:43.63:454,44,0	0/0:37,0:37:99:0,111,2711	0/0:30,0:30:90.31:0,90,2213	0/0:41,0:41:99:0,123,2952	0/0:24,0:24:72.23:0,72,1639	1/1:2,5:6:15.04:162,15,0	1/1:1,11:12:27.07:296,27,0	1/1:0,17:17:27.14:269,27,0	1/1:4,6:10:14.44:121,14,0	1/1:0,11:11:24.02:237,24,0	1/1:2,13:14:32.96:350,33,0	1/1:1,13:14:42.12:473,42,0	0/0:21,0:21:63.22:0,63,1531	0/0:24,0:24:72.25:0,72,1685	0/0:9,0:9:27.09:0,27,666
chr10	16497329	.	GAA	G	2912.64	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=17.970;DP=589;FS=19.147;HRun=2;HaplotypeScore=152.9758;InbreedingCoeff=0.9931;MQ=84.95;MQ0=0;MQRankSum=-16.233;QD=15.49;ReadPosRankSum=2.515;VQSLOD=-0.2327;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:61,0:61:99:0,181,3600	0/0:13,0:13:39.13:0,39,768	0/0:30,0:30:62.33:0,62,1415	0/0:20,0:20:51.08:0,51,933	0/0:21,0:21:60.21:0,60,1211	1/1:1,15:16:38.21:254,38,0	1/1:1,16:17:41.42:284,41,0	1/1:4,9:13:32.69:254,33,0	1/1:1,17:18:50.34:349,50,0	0/0:25,0:25:75.25:0,75,1470	0/0:18,0:18:54.18:0,54,1064	0/0:29,0:29:87.28:0,87,1721	1/1:1,17:18:51.73:374,52,0	1/1:0,15:15:41.19:333,41,0	0/0:37,0:37:99:0,111,2247	0/0:30,0:30:90.31:0,90,1820	0/0:41,0:41:99:0,123,2387	0/0:24,0:24:72.25:0,72,1461	1/1:2,5:7:17.68:120,18,0	1/1:3,11:14:32.70:242,33,0	1/1:3,17:20:20.27:165,20,0	1/1:5,6:11:11.85:83,12,0	1/1:1,11:12:25.75:178,26,0	1/1:0,13:13:32.26:229,32,0	1/1:1,13:14:39.38:279,39,0	0/0:23,0:23:69.20:0,69,1345	0/0:21,0:21:63.22:0,63,1280	0/0:8,0:8:24.08:0,24,488
chr10	16500256	.	CATATCTATATCTATACCTATATAT	C	562.79	PASS	AB=1.000;AC=11;AF=0.324;AN=34;BaseQRankSum=3.130;DP=194;FS=0.000;HRun=0;HaplotypeScore=106.5763;InbreedingCoeff=0.3596;MQ=69.58;MQ0=11;MQRankSum=-2.017;QD=10.05;ReadPosRankSum=-1.439;VQSLOD=1.2115;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:8:18.06:0,18,1205	./.	0/0:26,0:4:7.51:0,8,112	0/0:40,0:18:7.56:0,8,389	./.	0/1:6,0:6:0.18:0,0,0	./.	1/1:6,5:11:11.22:258,11,0	./.	1/1:6,0:6:3.01:75,3,0	./.	0/0:3,0:3:9.03:0,9,725	0/0:2,0:2:3.01:0,3,45	./.	0/0:10,0:10:27.03:0,27,794	0/0:4,0:4:6.02:0,6,334	0/1:4,0:4:64.18:64,0,102	0/0:11,0:11:27.09:0,27,1933	./.	0/1:4,0:4:0:0,0,0	./.	./.	0/1:5,0:5:0:0,0,0	./.	./.	1/1:7,0:7:6.02:121,6,0	0/0:2,0:2:3.01:0,3,60	0/1:13,0:12:99:154,0,519
chr10	16500259	.	AT	A	83.54	PASS	AC=10;AF=0.357;AN=28;BaseQRankSum=5.645;DP=138;FS=4.397;HRun=1;HaplotypeScore=51.0816;InbreedingCoeff=0.6803;MQ=79.89;MQ0=13;MQRankSum=-4.271;QD=4.40;ReadPosRankSum=0.766;VQSLOD=0.5402;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:6:18.06:0,18,288	./.	0/0:28,0:4:6.49:0,6,65	0/0:40,0:18:23.35:0,23,322	./.	./.	./.	0/0:5,0:5:5.95:0,6,43	./.	0/0:1,0:1:2.98:0,3,22	./.	0/0:3,0:3:9.03:0,9,144	1/1:0,1:1:2.90:16,3,0	./.	0/0:9,0:9:27.09:0,27,432	0/0:3,0:3:9.02:0,9,121	1/1:0,3:3:8.59:47,9,0	0/0:13,0:13:27.09:0,27,432	./.	./.	./.	./.	./.	./.	./.	1/1:0,2:2:5.56:31,6,0	1/1:0,1:1:2.94:18,3,0	1/1:3,8:11:11.28:91,11,0
chr10	16500261	.	CT	C	88.54	PASS	AC=10;AF=0.357;AN=28;BaseQRankSum=5.452;DP=137;FS=6.290;HRun=1;HaplotypeScore=50.4288;InbreedingCoeff=0.6735;MQ=77.08;MQ0=13;MQRankSum=-4.628;QD=4.66;ReadPosRankSum=1.696;VQSLOD=0.5203;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:6:18.06:0,18,288	./.	0/0:25,0:4:6.49:0,6,76	0/0:41,0:18:26.86:0,27,313	./.	./.	./.	0/0:5,0:5:5.95:0,6,43	./.	0/0:1,0:1:2.98:0,3,22	./.	0/0:3,0:3:9.03:0,9,144	1/1:0,1:1:2.90:16,3,0	./.	0/0:9,0:9:27.08:0,27,408	0/0:2,0:2:6.02:0,6,96	1/1:0,3:3:8.59:46,9,0	0/0:14,0:14:33.11:0,33,511	./.	./.	./.	./.	./.	./.	./.	1/1:0,2:2:5.65:31,6,0	1/1:0,1:1:2.94:18,3,0	1/1:4,8:11:13.53:96,14,0
chr10	16502742	.	AC	A	5880.80	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=12.469;DP=675;FS=14.588;HRun=1;HaplotypeScore=67.7813;InbreedingCoeff=0.9999;MQ=64.28;MQ0=8;MQRankSum=1.153;QD=38.95;ReadPosRankSum=1.407;VQSLOD=4.0008;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,102,1630	1/1:0,19:19:51.64:714,52,0	0/0:28,0:16:44.84:0,45,611	0/0:31,0:18:39.43:0,39,661	1/1:1,18:19:54.13:722,54,0	0/0:25,0:25:69.24:0,69,1100	0/0:34,0:34:99:0,99,1580	0/0:30,0:29:84.29:0,84,1342	0/0:28,0:28:84.27:0,84,1316	1/1:0,19:19:54.18:753,54,0	1/1:1,15:15:36.12:504,36,0	0/0:18,0:18:54.17:0,54,840	0/0:25,0:25:75.23:0,75,1174	0/0:22,0:22:66.23:0,66,1055	0/0:36,0:36:99:0,108,1715	0/0:23,0:23:69.24:0,69,1101	1/1:0,26:26:78.26:1091,78,0	0/0:16,0:16:48.16:0,48,767	0/0:17,0:14:42.13:0,42,648	0/0:19,0:19:54.17:0,54,834	0/0:43,0:43:99:0,126,1978	0/0:34,0:33:96.33:0,96,1535	0/0:16,0:16:42.12:0,42,625	0/0:27,0:27:81.28:0,81,1295	0/0:17,0:17:51.15:0,51,790	1/1:0,17:17:51.17:713,51,0	1/1:0,22:22:60.19:837,60,0	1/1:0,13:13:39.13:546,39,0
chr10	16504107	.	AGG	A	1859.78	PASS	AB=0.995;AC=33;AF=0.635;AN=52;BaseQRankSum=2.344;DP=640;FS=139.861;HRun=3;HaplotypeScore=275.3902;InbreedingCoeff=-0.4872;MQ=28.34;MQ0=24;MQRankSum=0.266;QD=2.96;ReadPosRankSum=-1.684;VQSLOD=-0.1046;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:17,0:13:28.35:28,0,89	0/1:17,0:16:52.22:54,0,52	./.	./.	1/1:25,0:24:5.70:50,6,0	0/1:31,0:28:22.43:107,0,22	1/1:23,1:20:5.46:112,5,0	0/1:30,0:23:54:54,0,62	0/1:16,0:16:21.81:85,0,22	0/1:24,0:23:73.89:74,0,106	1/1:21,0:20:9.59:35,10,0	0/1:24,0:22:25.40:25,0,69	1/1:19,1:18:4.47:112,4,0	0/1:22,1:22:11.36:62,0,11	0/1:33,0:29:70.61:71,0,159	0/1:22,0:18:45.60:46,0,134	1/1:7,0:5:5.16:36,5,0	0/1:9,0:8:25.34:25,0,60	0/1:13,0:10:6.52:7,0,51	1/1:48,2:49:10:152,10,0	0/0:12,0:9:2.54:0,3,11	0/1:50,1:50:17.63:171,0,18	0/1:34,1:34:14.57:132,0,15	1/1:15,1:15:2.03:5,2,0	1/1:54,4:56:37.63:412,38,0	0/1:18,0:16:14.93:80,0,15	0/1:14,0:13:16.81:45,0,17	0/1:30,0:28:28.66:29,0,208
chr10	16504122	.	G	GA	213.86	PASS	AB=1.000;AC=16;AF=0.400;AN=40;BaseQRankSum=0.872;DP=115;FS=4.743;HRun=0;HaplotypeScore=42.2745;InbreedingCoeff=0.4466;MQ=25.16;MQ0=17;MQRankSum=-0.961;QD=5.09;ReadPosRankSum=-2.084;VQSLOD=2.2793;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:5:12:0,12,145	./.	./.	./.	0/1:4,0:3:0:0,0,0	0/0:2,1:3:1.36:0,1,3	./.	1/1:2,1:2:3.01:37,3,0	1/1:1,0:1:2.92:17,3,0	0/1:3,0:3:3.81:12,0,4	0/0:4,0:4:2.68:0,3,11	0/0:8,0:6:0.47:0,0,1	1/1:1,1:2:3:26,3,0	1/1:5,0:5:8.82:54,9,0	0/0:10,0:7:2.83:0,3,20	0/0:9,0:5:15:0,15,184	0/0:2,0:2:2.96:0,3,19	0/0:4,0:3:6.02:0,6,83	./.	1/1:5,1:6:3.01:30,3,0	./.	1/1:7,1:7:5.91:45,6,0	0/0:4,1:4:1.06:0,1,11	./.	1/1:10,0:8:13.78:118,14,0	0/0:2,0:1:2.50:0,2,9	./.	0/0:5,0:4:9.57:0,10,40
chr10	16504202	.	AAG	A	433.42	PASS	AB=0.955;AC=22;AF=0.407;AN=54;BaseQRankSum=1.783;DP=327;FS=18.343;HRun=0;HaplotypeScore=100.7658;InbreedingCoeff=-0.0340;MQ=35.73;MQ0=8;MQRankSum=-0.810;QD=1.95;ReadPosRankSum=-2.900;VQSLOD=-0.0987;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:11:29.37:0,29,320	0/0:3,0:3:5.94:0,6,41	./.	0/1:7,2:4:25.48:25,0,28	0/1:9,0:9:3.20:3,0,36	1/1:14,0:12:9.78:98,10,0	0/1:10,1:10:24.86:71,0,25	0/1:35,6:29:99:112,0,165	1/1:6,0:6:3.45:31,3,0	0/0:14,0:12:4.42:0,4,134	0/1:8,0:8:3.98:4,0,31	0/0:11,0:11:26.99:0,27,294	1/1:6,0:6:8.78:56,9,0	1/1:4,0:4:2.80:19,3,0	0/0:11,0:11:33.01:0,33,380	0/0:16,0:16:48.14:0,48,611	1/1:5,0:5:0.89:2,1,0	0/0:15,0:14:32.96:0,33,454	0/1:14,2:14:40.18:40,0,185	0/1:24,1:24:38.64:39,0,156	0/0:7,0:5:3:0,3,25	0/1:15,0:14:16.02:16,0,32	0/1:16,0:16:28.73:29,0,91	0/1:12,0:11:9.75:14,0,10	0/1:17,0:17:27.60:28,0,49	0/1:8,0:7:3.75:4,0,29	0/0:6,0:6:11.90:0,12,111	0/0:7,0:7:8.31:0,8,61
chr10	16504204	.	G	GAGAA	766.04	PASS	AB=0.941;AC=16;AF=0.296;AN=54;BaseQRankSum=-0.530;DP=350;FS=7.929;HRun=0;HaplotypeScore=116.5492;InbreedingCoeff=-0.2136;MQ=36.19;MQ0=9;MQRankSum=-1.165;QD=3.53;ReadPosRankSum=-2.052;VQSLOD=1.3350;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:12:31.34:0,31,347	0/0:3,0:3:5.78:0,6,31	./.	0/1:9,0:5:25.48:25,0,26	0/0:10,0:10:14.27:0,14,67	0/1:13,1:12:14.46:105,0,14	0/1:11,1:11:31.34:31,0,66	0/1:41,0:29:99:125,0,249	1/1:5,1:6:0.27:99,0,0	0/0:15,0:13:23.37:0,23,167	0/0:8,0:8:6.12:0,6,72	0/0:11,0:11:27:0,27,381	0/1:4,2:6:0.17:72,0,0	0/1:8,0:8:9.56:30,0,10	0/0:12,0:12:33:0,33,471	0/0:16,0:16:48.08:0,48,661	0/0:5,0:5:0:0,0,0	0/0:16,0:15:41.89:0,42,574	0/1:17,0:15:74.30:118,0,74	0/1:22,2:23:49.60:50,0,192	0/0:8,0:6:3:0,3,25	0/1:13,1:13:28.93:118,0,29	0/1:14,2:16:72.21:72,0,119	0/1:12,0:11:8.57:9,0,32	0/1:16,1:18:49.17:49,0,64	0/0:10,0:9:18.01:0,18,133	0/1:7,0:7:3.37:3,0,46	0/1:11,0:11:2.72:3,0,31
chr10	16504208	.	GAGAGAA	G	1411.21	PASS	AB=0.958;AC=20;AF=0.357;AN=56;BaseQRankSum=-1.899;DP=372;FS=11.983;HRun=0;HaplotypeScore=119.5104;InbreedingCoeff=-0.3261;MQ=36.45;MQ0=10;MQRankSum=0.238;QD=5.45;ReadPosRankSum=-5.136;VQSLOD=-0.4130;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:12:25.68:0,26,441	0/0:3,0:3:5.97:0,6,45	0/0:11,0:2:6.02:0,6,103	0/0:12,0:5:6.17:0,6,126	0/1:11,0:11:48.21:194,0,48	0/1:15,0:13:28.23:78,0,28	0/1:13,0:12:59.57:60,0,108	0/1:45,0:33:99:136,0,227	0/1:6,0:6:26.36:26,0,71	0/1:13,2:13:99:310,0,188	0/1:7,1:8:9.08:67,0,9	0/0:13,0:13:32.61:0,33,403	0/1:6,0:6:2.78:3,0,24	0/1:8,0:8:13.09:13,0,26	0/0:12,0:12:35.56:0,36,465	0/0:16,0:16:47.41:0,47,714	1/1:0,5:5:3.01:56,3,0	0/0:16,0:15:28.37:0,28,803	0/1:18,0:15:18.94:19,0,282	0/1:24,0:23:12.78:13,0,239	0/1:8,0:6:0.04:0,0,0	0/1:14,0:13:2.11:2,0,50	0/0:17,0:17:14.12:0,14,203	0/1:13,0:12:10.30:11,0,10	0/1:19,0:19:2.32:2,0,133	0/1:9,3:11:11.86:319,0,12	0/1:6,1:7:18.39:18,0,198	0/1:9,3:12:78.96:233,0,79
chr10	16505822	.	TA	T	15552.78	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=19.901;DP=723;FS=5.505;HRun=1;HaplotypeScore=180.8626;InbreedingCoeff=0.9995;MQ=57.45;MQ0=1;MQRankSum=-0.507;QD=31.94;ReadPosRankSum=3.577;VQSLOD=4.3735;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,117,1863	1/1:1,8:9:27.08:323,27,0	0/0:34,0:25:71.56:0,72,1007	0/0:32,0:27:66.05:0,66,1074	1/1:0,15:15:39.12:467,39,0	1/1:1,22:23:63.15:754,63,0	1/1:1,35:35:99:1185,99,0	1/1:0,23:23:66.19:781,66,0	1/1:0,20:20:54.17:648,54,0	1/1:4,27:30:83.06:972,83,0	1/1:0,13:13:36.11:431,36,0	0/0:36,0:36:99:0,108,1712	1/1:0,32:32:96.29:1151,96,0	1/1:3,18:21:54.07:648,54,0	0/0:32,0:32:96.33:0,96,1521	0/0:31,0:31:93.30:0,93,1461	1/1:0,28:28:78.24:935,78,0	0/0:32,0:32:93.31:0,93,1450	1/1:1,14:14:31.34:363,31,0	1/1:2,18:20:48.01:524,48,0	1/1:4,43:46:99:1467,127,0	1/1:4,24:28:75.27:862,75,0	1/1:0,14:13:33.10:395,33,0	1/1:0,27:27:69.21:828,69,0	1/1:3,24:27:78.69:916,79,0	1/1:2,24:26:68.97:789,69,0	1/1:0,22:22:66.20:791,66,0	1/1:0,10:10:27.08:324,27,0
chr10	16506683	.	C	CAA	4854.72	PASS	AB=0.869;AC=27;AF=0.482;AN=56;BaseQRankSum=-3.677;DP=591;FS=12.235;HRun=11;HaplotypeScore=95.0056;InbreedingCoeff=0.7945;MQ=75.36;MQ0=7;MQRankSum=-0.893;QD=15.08;ReadPosRankSum=-4.704;VQSLOD=1.2124;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:47:65.36:0,65,802	0/0:11,0:11:20.22:0,20,202	0/1:23,0:16:5.76:6,0,100	0/1:26,0:20:3.38:3,0,99	0/0:16,0:18:29.53:0,30,273	1/1:6,8:16:20.04:232,20,0	1/1:9,14:24:23.10:545,23,0	1/1:7,16:23:45.09:586,45,0	0/1:8,8:18:6.80:178,0,7	0/0:12,0:13:16.66:0,17,222	0/0:15,0:15:26.91:0,27,254	0/0:17,0:17:9.63:0,10,287	1/1:11,0:11:24.04:271,24,0	1/1:4,11:15:8.99:99,9,0	0/0:13,0:16:15.94:0,16,198	0/0:21,1:22:4.52:0,5,386	0/0:24,0:25:65.79:0,66,615	0/0:35,0:33:71.90:0,72,692	1/1:12,5:20:44:491,44,0	1/1:6,14:23:39.31:415,39,0	1/1:5,23:30:35.09:451,35,0	1/1:3,15:22:38.51:461,39,0	1/1:3,13:18:31.52:340,32,0	1/1:3,22:26:39.13:565,39,0	1/1:5,13:21:17.54:211,18,0	0/0:24,0:24:32.81:0,33,319	0/0:15,0:15:29.96:0,30,285	0/0:11,0:11:27.01:0,27,261
chr10	16507311	.	T	TC	4539.28	PASS	AB=0.563;AC=25;AF=0.446;AN=56;BaseQRankSum=5.496;DP=525;FS=0.400;HRun=9;HaplotypeScore=67.4755;InbreedingCoeff=0.9073;MQ=87.79;MQ0=0;MQRankSum=-0.805;QD=20.17;ReadPosRankSum=-1.658;VQSLOD=4.6369;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:73.22:0,73,628	0/0:9,0:9:11.97:0,12,104	0/0:24,0:24:20.32:0,20,297	0/0:18,0:21:33.94:0,34,349	0/0:12,0:12:17.89:0,18,156	1/1:4,15:19:19.10:439,19,0	1/1:4,18:22:48.13:531,48,0	1/1:10,17:27:35.60:366,36,0	1/1:2,16:18:19.07:438,19,0	0/0:20,0:20:44.98:0,45,391	0/0:12,0:12:29.92:0,30,249	0/0:23,0:23:59.98:0,60,521	1/1:4,6:10:18.05:199,18,0	1/1:8,17:25:36.09:389,36,0	0/0:15,0:15:38.99:0,39,339	0/0:23,0:23:47.96:0,48,414	0/0:23,0:23:53.97:0,54,469	0/0:23,0:23:56.94:0,57,488	1/1:2,10:12:30.06:321,30,0	1/1:3,10:13:27.07:295,27,0	1/1:3,12:16:23.90:246,24,0	0/1:2,7:8:4.99:178,0,5	1/1:3,2:5:3.01:33,3,0	1/1:2,31:33:68.71:762,69,0	1/1:5,11:16:12.34:342,12,0	0/0:20,0:20:41.98:0,42,364	0/0:27,0:27:74.97:0,75,647	0/0:17,0:17:47.99:0,48,417
chr10	16507741	.	C	CAATA	898.09	PASS	AB=1.000;AC=13;AF=0.433;AN=30;BaseQRankSum=-4.818;DP=214;FS=13.579;HRun=0;HaplotypeScore=37.9954;InbreedingCoeff=0.4039;MQ=68.50;MQ0=0;MQRankSum=-0.471;QD=10.44;ReadPosRankSum=1.394;VQSLOD=0.7935;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:12,0:12:10.40:10,0,249	1/1:1,1:2:3.01:70,3,0	./.	./.	./.	0/1:9,0:9:7.72:8,0,144	0/0:3,0:3:3:0,3,29	0/1:24,0:22:0:0,0,0	0/0:6,0:6:3.01:0,3,32	1/1:7,1:8:3.01:70,3,0	1/1:3,1:4:3.01:70,3,0	./.	./.	./.	0/0:7,0:7:12.01:0,12,141	./.	1/1:5,14:19:27.05:578,27,0	0/0:15,0:15:18.06:0,18,272	0/0:13,0:12:6.01:0,6,60	./.	0/0:3,0:3:6.01:0,6,61	./.	./.	./.	0/0:14,0:14:18.03:0,18,177	./.	./.	1/1:4,4:8:9.03:209,9,0
chr10	16509000	.	T	TTAAA	10755.10	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-13.876;DP=708;FS=3.001;HRun=0;HaplotypeScore=115.9213;InbreedingCoeff=0.9935;MQ=76.51;MQ0=0;MQRankSum=-2.553;QD=52.21;ReadPosRankSum=1.414;VQSLOD=6.1799;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:87.28:0,87,1440	1/1:5,6:11:24.08:562,24,0	0/0:15,0:15:21.07:0,21,341	0/0:16,0:16:27.07:0,27,430	1/1:3,13:18:42.10:926,42,0	0/0:26,0:26:60.18:0,60,966	0/0:23,0:23:63.19:0,63,1018	0/0:25,0:25:36.12:0,36,609	0/0:29,0:29:72.25:0,72,1208	1/1:15,20:36:75.24:1772,75,0	1/1:8,22:31:69.19:1567,69,0	0/0:24,0:24:57.19:0,57,938	0/0:29,0:29:60.20:0,60,1007	0/0:25,0:25:69.24:0,69,1163	0/0:20,0:20:48.15:0,48,789	0/0:22,0:22:54.18:0,54,906	1/1:8,38:47:99:2472,99,0	0/0:24,0:24:63.22:0,63,1057	0/0:23,0:23:54.18:0,54,902	0/0:35,0:35:90.31:0,90,1519	0/0:10,0:10:30.10:0,30,509	0/0:23,0:23:42.14:0,42,709	0/0:35,0:35:87.28:0,87,1446	0/0:27,0:27:69.19:0,69,1106	0/0:33,0:33:78.27:0,78,1324	1/1:6,20:27:69.24:1659,69,0	1/1:6,21:28:60.21:1497,60,0	1/1:5,3:8:12.04:299,12,0
chr10	16509887	.	A	AT	5016.97	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-5.187;DP=584;FS=0.357;HRun=6;HaplotypeScore=63.8217;InbreedingCoeff=0.9950;MQ=79.90;MQ0=0;MQRankSum=-1.638;QD=32.79;ReadPosRankSum=1.423;VQSLOD=5.0299;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,147,1491	1/1:0,9:9:27.05:323,27,0	0/0:18,0:18:32.10:0,32,336	0/0:17,0:17:16.37:0,16,222	1/1:1,21:22:51.12:623,51,0	0/0:17,0:17:51.10:0,51,513	0/0:25,0:25:69.13:0,69,695	0/0:16,0:16:42.08:0,42,424	0/0:14,0:14:39.09:0,39,398	1/1:1,16:17:51.15:626,51,0	1/1:1,13:14:39.12:490,39,0	0/0:25,0:25:72.16:0,72,734	0/0:21,0:21:63.13:0,63,635	0/0:27,0:27:75.13:0,75,754	0/0:16,0:16:48.02:0,48,466	0/0:20,0:20:57.09:0,57,567	1/1:1,38:39:99:1359,108,0	0/0:17,0:17:51.12:0,51,520	0/0:32,0:32:90.15:0,90,893	0/0:14,0:14:33.07:0,33,337	0/0:22,0:22:66.11:0,66,657	0/0:13,0:13:39.06:0,39,384	0/0:20,0:20:54.12:0,54,550	0/0:36,0:36:99:0,105,1052	0/0:11,0:11:30.07:0,30,306	1/1:3,27:30:53.64:974,54,0	1/1:2,13:15:36.06:433,36,0	1/1:0,7:7:15.05:189,15,0
chr10	16512196	.	G	GTT	6221.47	PASS	AB=1.000;AC=27;AF=0.482;AN=56;BaseQRankSum=-4.343;DP=763;FS=7.260;HRun=12;HaplotypeScore=107.6953;InbreedingCoeff=0.9153;MQ=73.51;MQ0=7;MQRankSum=-0.985;QD=17.88;ReadPosRankSum=0.650;VQSLOD=3.7202;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:53:99:0,107,1077	0/0:8,0:9:20.75:0,21,179	0/0:67,0:39:35.24:0,35,286	0/1:43,0:23:25.65:26,0,38	0/0:27,0:28:62.17:0,62,553	1/1:6,9:21:38.09:440,38,0	1/1:8,17:26:36.12:492,36,0	1/1:9,14:24:32.96:507,33,0	1/1:2,23:26:54.80:727,55,0	0/0:28,0:30:47.26:0,47,399	0/0:20,0:20:23:0,23,366	0/0:32,0:36:74.17:0,74,741	1/1:3,23:27:42.10:556,42,0	1/1:7,16:26:34.96:411,35,0	0/0:29,0:30:74.77:0,75,677	0/0:24,0:26:47.91:0,48,469	0/0:37,0:37:48.96:0,49,776	0/0:24,0:25:55.74:0,56,477	1/1:12,7:21:19.73:251,20,0	1/1:2,12:18:34.62:458,35,0	1/1:2,13:16:30.10:407,30,0	1/1:9,18:34:52.30:552,52,0	1/1:5,10:15:24.08:336,24,0	1/1:1,18:23:43.09:497,43,0	1/1:2,19:26:46.62:562,47,0	0/0:12,0:12:29.97:0,30,277	0/0:26,0:27:54.52:0,55,533	0/0:11,0:12:7.33:0,7,113
chr10	16513282	.	TAC	T	13855.72	PASS	AB=0.913;AC=43;AF=0.768;AN=56;BaseQRankSum=10.289;DP=600;FS=9.992;HRun=0;HaplotypeScore=81.1004;InbreedingCoeff=0.8719;MQ=65.35;MQ0=4;MQRankSum=0.169;QD=29.93;ReadPosRankSum=1.851;VQSLOD=6.3937;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,105,1755	1/1:0,11:11:21.07:273,21,0	0/0:10,0:10:24.08:0,24,385	0/0:24,0:22:38.70:0,39,556	1/1:1,9:10:18.06:234,18,0	1/1:2,14:16:39.13:507,39,0	1/1:1,28:29:72.23:936,72,0	1/1:5,18:23:54.18:700,54,0	1/1:3,24:27:72.23:936,72,0	1/1:2,9:11:27.09:351,27,0	1/1:1,6:7:18.06:234,18,0	0/0:24,0:24:69.24:0,69,1173	1/1:0,19:17:51.13:645,51,0	1/1:4,30:34:90.29:1170,90,0	0/0:10,0:10:30.10:0,30,510	0/1:19,2:21:17.85:18,0,837	1/1:4,29:33:78.25:1014,78,0	0/0:29,0:29:72.25:0,72,1223	1/1:4,17:20:48.62:612,49,0	1/1:1,8:9:24.08:312,24,0	1/1:6,64:70:99:2067,160,0	1/1:2,9:11:27.09:351,27,0	1/1:0,4:4:5.85:78,6,0	1/1:2,40:42:99:1443,111,0	1/1:2,13:16:36.12:468,36,0	1/1:2,21:23:63.19:804,63,0	1/1:4,18:22:41.97:546,42,0	1/1:0,4:4:12.04:156,12,0
chr10	16514028	.	AC	A	2342.49	PASS	AB=1.000;AC=41;AF=0.732;AN=56;BaseQRankSum=7.597;DP=436;FS=9.931;HRun=6;HaplotypeScore=87.9439;InbreedingCoeff=0.7774;MQ=82.62;MQ0=5;MQRankSum=-1.014;QD=9.41;ReadPosRankSum=1.661;VQSLOD=0.6391;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:42.07:0,42,469	1/1:2,0:2:2.80:13,3,0	0/0:40,0:13:6.23:0,6,87	0/0:33,0:23:16.05:0,16,153	0/1:13,0:13:0.16:50,0,0	1/1:2,9:13:20.09:149,20,0	1/1:12,3:17:26.69:175,27,0	1/1:7,9:16:15.65:130,16,0	1/1:3,4:7:6.01:62,6,0	1/1:13,3:16:21.67:162,22,0	1/1:8,1:9:0.98:49,1,0	0/0:21,0:21:46.23:0,46,451	1/1:5,1:7:10.04:57,10,0	1/1:8,4:13:26.02:225,26,0	0/0:20,0:19:43.31:0,43,372	0/0:14,0:14:14.08:0,14,214	1/1:15,4:20:43.86:290,44,0	0/0:32,0:32:77.31:0,77,776	1/1:5,3:16:32.70:241,33,0	1/1:2,0:11:23.45:139,23,0	1/1:4,2:12:10.15:74,10,0	1/1:1,5:8:14.03:88,14,0	1/1:2,8:10:9:94,9,0	1/1:2,13:16:22.84:200,23,0	1/1:0,1:7:5.75:43,6,0	1/1:12,1:13:23:140,23,0	1/1:9,1:10:8.85:77,9,0	1/1:11,0:11:9.78:71,10,0
chr10	16514032	.	C	CT	123.38	PASS	AB=0.977;AC=13;AF=0.232;AN=56;BaseQRankSum=5.681;DP=479;FS=19.468;HRun=0;HaplotypeScore=102.8533;InbreedingCoeff=-0.1257;MQ=80.06;MQ0=6;MQRankSum=-0.265;QD=0.81;ReadPosRankSum=4.376;VQSLOD=0.4582;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:60.05:0,60,679	1/1:3,1:4:2.35:14,2,0	0/0:48,0:15:16.32:0,16,155	0/0:34,0:23:36.25:0,36,384	0/0:14,0:14:20.70:0,21,121	0/0:17,0:17:1.82:0,2,70	0/1:15,0:16:36.40:36,0,83	0/0:17,0:17:12.95:0,13,101	0/0:10,0:10:10.03:0,10,109	0/1:14,1:15:37.30:54,0,37	0/1:8,0:8:14.48:14,0,70	0/0:20,0:20:59.22:0,59,639	0/0:12,0:12:24.06:0,24,166	0/1:12,0:12:6.43:6,0,52	0/0:21,0:20:57.04:0,57,642	0/0:15,0:15:42.62:0,43,450	0/1:20,1:21:37.70:53,0,38	0/0:32,0:32:94.44:0,94,1075	0/0:21,0:20:15.44:0,15,151	0/1:9,0:9:6.74:36,0,7	0/1:11,0:11:0.09:0,0,51	0/1:9,0:9:7.29:7,0,44	0/0:11,0:11:0.60:0,1,61	0/1:20,0:19:8.34:8,0,69	0/0:15,0:15:14.52:0,15,135	0/1:16,1:17:27.54:28,0,52	0/1:9,1:10:3.06:3,0,97	0/0:15,0:15:28.80:0,29,186
chr10	16514088	.	AT	A	1019.57	PASS	AB=0.838;AC=19;AF=0.339;AN=56;BaseQRankSum=4.941;DP=358;FS=4.594;HRun=14;HaplotypeScore=63.4220;InbreedingCoeff=0.6139;MQ=72.63;MQ0=1;MQRankSum=0.316;QD=7.23;ReadPosRankSum=0.636;VQSLOD=2.6292;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:25:35.02:0,35,404	1/1:2,4:7:13.89:88,14,0	0/0:14,0:11:2.40:0,2,21	0/0:4,0:4:5.21:0,5,30	1/1:4,9:15:21.82:135,22,0	0/0:13,1:15:21.30:0,21,328	0/1:17,3:21:14.48:14,0,329	0/0:12,0:13:7.40:0,7,180	0/0:9,0:9:18.48:0,18,164	1/1:4,5:11:18.94:114,19,0	1/1:1,4:5:11.88:82,12,0	0/0:18,1:20:3.68:0,4,290	0/0:12,2:14:3.38:0,3,157	0/1:8,1:10:11.55:12,0,66	0/0:10,0:10:20.85:0,21,177	0/0:2,0:8:14.20:0,14,72	1/1:4,11:17:36.70:237,37,0	0/1:12,3:16:22.96:23,0,212	0/0:11,1:12:9.38:0,9,215	0/0:9,0:9:12:0,12,107	0/0:19,2:21:18.47:0,18,307	0/0:5,0:5:6.01:0,6,56	0/0:7,0:7:14.91:0,15,123	0/0:20,1:20:30.45:0,30,414	0/0:10,0:10:20.75:0,21,175	1/1:6,11:17:7.79:195,8,0	1/1:3,9:13:25.82:170,26,0	1/1:1,8:9:20.82:144,21,0
chr10	16514848	.	CG	C	7694.56	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=10.897;DP=393;FS=1.759;HRun=3;HaplotypeScore=42.0277;InbreedingCoeff=0.9363;MQ=74.81;MQ0=1;MQRankSum=-2.189;QD=33.31;ReadPosRankSum=1.796;VQSLOD=4.9156;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:39.13:0,39,561	0/0:3,0:3:9.03:0,9,129	0/0:9,0:9:21.07:0,21,289	0/0:4,0:4:7.36:0,7,113	0/0:8,0:8:24.08:0,24,344	1/1:1,8:9:21.07:260,21,0	1/1:0,26:26:75.24:929,75,0	1/1:1,14:15:39.11:471,39,0	1/1:0,9:9:24.08:297,24,0	0/0:11,0:11:30.07:0,30,409	0/0:2,0:2:6.02:0,6,86	0/0:22,0:22:66.14:0,66,856	1/1:0,16:16:45.14:556,45,0	1/1:0,23:23:66.20:814,66,0	0/0:6,0:6:18.05:0,18,242	0/0:5,0:5:15.05:0,15,216	0/0:28,0:28:84.28:0,84,1202	0/0:25,0:26:75.08:0,75,1050	1/1:0,16:16:48.13:580,48,0	1/1:0,2:2:6.02:74,6,0	1/1:3,51:53:99:1819,147,0	1/1:0,8:8:15.05:186,15,0	1/1:1,4:5:12.03:149,12,0	1/1:0,33:33:87.27:1078,87,0	1/1:0,15:15:39.12:482,39,0	0/0:13,0:13:39.13:0,39,558	0/0:8,0:8:24.01:0,24,320	0/0:4,0:4:12.04:0,12,173
chr10	16516277	.	AACG	A	11607.77	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=14.740;DP=550;FS=0.000;HRun=0;HaplotypeScore=82.7012;InbreedingCoeff=0.9986;MQ=80.01;MQ0=0;MQRankSum=-5.933;QD=42.36;ReadPosRankSum=-0.666;VQSLOD=5.6793;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:57.20:0,57,1313	0/0:6,0:6:18.06:0,18,415	0/0:16,0:16:48.16:0,48,1045	0/0:14,0:14:42.12:0,42,857	0/0:22,0:22:57.20:0,57,1284	1/1:0,17:17:48.16:818,48,0	1/1:3,21:24:54.18:921,54,0	1/1:1,35:36:99:1703,105,0	1/1:0,20:20:54.18:921,54,0	0/0:20,0:20:57.20:0,57,1300	0/0:13,0:13:33.39:0,33,753	0/0:13,0:13:33.10:0,33,713	1/1:0,27:27:72.25:1228,72,0	1/1:1,16:17:45.15:767,45,0	0/0:18,0:18:54.19:0,54,1244	0/0:21,0:21:63.22:0,63,1449	0/0:23,0:23:63.22:0,63,1450	0/0:26,0:26:78.27:0,78,1797	1/1:2,16:18:48.16:799,48,0	1/1:1,14:15:42.10:684,42,0	1/1:1,28:29:57.19:956,57,0	1/1:1,12:13:27.09:458,27,0	1/1:2,15:17:33.11:563,33,0	1/1:1,28:29:72.25:1227,72,0	1/1:0,12:12:33.11:563,33,0	0/0:19,0:19:51.18:0,51,1172	0/0:30,0:30:90.31:0,90,2070	0/0:14,0:14:42.14:0,42,967
chr10	16516554	.	C	CT	5769.93	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-12.992;DP=649;FS=8.472;HRun=8;HaplotypeScore=59.8637;InbreedingCoeff=0.9994;MQ=77.94;MQ0=0;MQRankSum=-0.975;QD=29.90;ReadPosRankSum=4.716;VQSLOD=4.4797;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:87:0,87,784	1/1:1,9:10:27.08:312,27,0	0/0:19,0:19:35.15:0,35,298	0/0:14,0:14:24.48:0,24,220	1/1:2,33:35:91.15:1040,91,0	0/0:36,0:36:96.03:0,96,874	0/0:15,0:15:42.02:0,42,384	0/0:26,0:26:32.12:0,32,368	0/0:16,0:16:42:0,42,379	1/1:2,30:32:93.23:1054,93,0	1/1:3,24:27:72.21:831,72,0	0/0:24,0:24:60.02:0,60,549	0/0:22,0:22:66.02:0,66,599	0/0:19,0:19:51.01:0,51,462	0/0:32,0:32:93.03:0,93,846	0/0:18,0:18:48.02:0,48,439	1/1:5,19:24:51.15:589,51,0	0/0:31,0:31:81.03:0,81,741	0/0:21,0:21:63.02:0,63,572	0/0:22,0:22:60.03:0,60,549	0/0:16,0:16:45.02:0,45,412	0/0:24,0:24:66.03:0,66,604	0/0:20,0:20:53.97:0,54,489	0/0:24,0:24:63.03:0,63,577	0/0:22,0:22:63.02:0,63,573	1/1:0,14:14:42.12:485,42,0	1/1:8,26:33:53.78:871,54,0	1/1:0,17:17:51.15:589,51,0
chr10	16517440	.	A	AGAG	8424.99	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-11.737;DP=708;FS=5.607;HRun=0;HaplotypeScore=98.8248;InbreedingCoeff=0.9971;MQ=84.95;MQ0=0;MQRankSum=-3.834;QD=51.69;ReadPosRankSum=2.125;VQSLOD=7.3751;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,141,2178	1/1:0,9:11:30.10:638,30,0	0/0:20,0:20:57.12:0,57,796	0/0:25,0:25:66.19:0,66,986	1/1:3,11:15:27.09:583,27,0	0/0:25,0:25:60.17:0,60,894	0/0:27,0:27:78.25:0,78,1196	0/0:22,0:22:63.21:0,63,985	0/0:31,0:31:84.29:0,84,1312	1/1:3,30:33:93.28:1950,93,0	1/1:1,15:16:42.14:905,42,0	0/0:28,0:28:72.23:0,72,1104	0/0:30,0:30:81.28:0,81,1267	0/0:33,0:33:90.28:0,90,1363	0/0:35,0:35:96.31:0,96,1473	0/0:21,0:21:63.21:0,63,986	1/1:2,27:31:69.24:1493,69,0	0/0:33,0:33:78.22:0,78,1188	0/0:15,0:15:38.34:0,38,607	0/0:30,0:30:75.26:0,75,1173	0/0:34,0:34:93.30:0,93,1425	0/0:18,0:18:42.14:0,42,653	0/0:13,0:13:39.13:0,39,610	0/0:31,0:31:84.27:0,84,1291	0/0:23,0:23:63.20:0,63,964	1/1:6,22:28:69.24:1493,69,0	1/1:2,19:22:48.16:1039,48,0	1/1:2,5:7:15.05:325,15,0
chr10	16517557	.	G	GCCGCCA	7352.38	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-3.342;DP=686;FS=0.956;HRun=0;HaplotypeScore=160.7111;InbreedingCoeff=0.9446;MQ=82.12;MQ0=0;MQRankSum=-12.130;QD=49.02;ReadPosRankSum=-3.190;VQSLOD=4.4413;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:78.24:0,78,1620	1/1:4,9:15:15.05:512,15,0	0/0:16,0:16:45.14:0,45,819	0/0:24,0:25:41.95:0,42,731	1/1:7,4:13:5.46:202,5,0	0/0:13,0:13:39.12:0,39,796	0/0:31,0:31:87.28:0,87,1899	0/0:27,0:27:60.16:0,60,1126	0/0:19,0:19:54.19:0,54,1206	1/1:11,5:20:41.69:1034,42,0	1/1:12,0:12:3.01:102,3,0	0/0:31,0:31:84.27:0,84,1822	0/0:30,0:30:81.26:0,81,1764	0/0:30,0:30:78.24:0,78,1640	0/0:32,0:32:96.30:0,96,1984	0/0:24,0:24:63.22:0,63,1389	1/1:9,22:32:60.21:1987,60,0	0/0:49,0:49:99:0,144,3083	0/0:18,0:18:39.13:0,39,801	0/0:15,0:15:30.08:0,30,556	0/0:61,0:61:99:0,138,2723	0/0:10,0:10:18.05:0,18,362	0/0:13,0:13:33.08:0,33,599	0/0:37,0:37:99:0,108,2344	0/0:25,0:25:66.19:0,66,1332	1/1:13,17:34:60.21:1902,60,0	1/1:4,10:16:29.67:999,30,0	1/1:0,8:8:18.06:613,18,0
chr10	16519527	.	GA	G	4830.29	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=12.589;DP=710;FS=19.211;HRun=8;HaplotypeScore=71.9907;InbreedingCoeff=0.9818;MQ=85.47;MQ0=0;MQRankSum=-0.659;QD=25.83;ReadPosRankSum=1.074;VQSLOD=3.4928;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,114,1355	1/1:1,2:3:6.01:58,6,0	0/0:23,1:24:28.18:0,28,600	0/0:24,0:24:34.87:0,35,627	1/1:2,27:29:75.11:724,75,0	0/0:16,0:16:42.13:0,42,507	0/0:27,0:27:72.22:0,72,870	0/0:25,0:25:69.20:0,69,824	0/0:37,0:37:99:0,99,1183	1/1:0,33:33:99:956,99,0	1/1:0,19:19:51.08:492,51,0	0/0:29,0:29:78.24:0,78,941	0/0:31,0:32:81.11:0,81,957	0/0:26,0:26:69.21:0,69,834	0/0:32,0:32:87.26:0,87,1042	0/0:27,0:27:78.23:0,78,932	1/1:3,27:30:47.89:746,48,0	0/0:11,0:11:33.08:0,33,384	0/0:10,0:10:27.06:0,27,313	0/0:26,0:26:66.20:0,66,797	0/0:31,0:31:90.26:0,90,1075	0/0:29,0:29:87.27:0,87,1050	0/0:23,0:23:63.19:0,63,760	0/0:28,0:28:75.21:0,75,893	0/0:27,0:27:72.22:0,72,870	1/1:3,27:30:81.13:782,81,0	1/1:0,33:33:84.14:811,84,0	1/1:1,9:10:27.04:261,27,0
chr10	16523797	.	TC	T	6789.27	PASS	AB=0.850;AC=42;AF=0.750;AN=56;BaseQRankSum=5.005;DP=484;FS=0.903;HRun=9;HaplotypeScore=57.2248;InbreedingCoeff=0.7712;MQ=80.46;MQ0=0;MQRankSum=-3.414;QD=18.96;ReadPosRankSum=2.408;VQSLOD=5.2282;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,1:32:41.68:0,42,694	1/1:0,5:5:11.59:109,12,0	0/0:24,0:23:14.39:0,14,211	0/1:15,0:14:50.09:50,0,109	1/1:4,10:14:26.98:247,27,0	1/1:1,11:12:27:241,27,0	1/1:2,35:37:96.05:877,96,0	0/1:8,6:14:4.87:95,0,5	1/1:2,8:11:23.04:198,23,0	1/1:2,5:7:5.99:55,6,0	1/1:1,5:6:9:82,9,0	0/0:27,0:27:61.94:0,62,653	1/1:3,10:13:21:192,21,0	1/1:4,14:18:42.02:383,42,0	0/0:14,0:14:39.12:0,39,450	0/0:13,0:13:36.11:0,36,415	1/1:3,42:45:99:1141,126,0	0/0:15,1:16:17.67:0,18,457	1/1:5,13:18:39:352,39,0	1/1:4,7:11:14.99:136,15,0	1/1:5,34:39:81.04:741,81,0	1/1:1,10:11:30.01:272,30,0	1/1:1,10:11:24.01:219,24,0	1/1:6,16:22:48.01:439,48,0	1/1:2,11:13:30.01:274,30,0	1/1:3,12:15:33.01:302,33,0	1/1:4,11:15:36:328,36,0	1/1:3,2:5:5.99:55,6,0
chr10	16524995	.	CT	C	2186.62	PASS	AB=0.742;AC=40;AF=0.714;AN=56;BaseQRankSum=5.848;DP=555;FS=1.922;HRun=19;HaplotypeScore=86.9549;InbreedingCoeff=0.6375;MQ=74.85;MQ0=10;MQRankSum=2.336;QD=5.86;ReadPosRankSum=4.981;VQSLOD=2.3851;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:0.16:0,0,52	1/1:5,3:8:9.75:47,10,0	0/0:38,0:12:6.09:0,6,30	0/0:34,0:23:11.12:0,11,46	1/1:12,8:22:19.91:95,20,0	1/1:8,14:22:2.01:97,2,0	1/1:14,8:24:18.20:130,18,0	1/1:19,10:29:32.49:189,32,0	1/1:15,3:18:0.19:66,0,0	1/1:5,10:15:30.77:154,31,0	1/1:10,11:21:22.48:144,22,0	0/0:26,0:26:16.24:0,16,174	1/1:12,6:19:40.47:188,40,0	1/1:10,4:14:20.16:100,20,0	0/0:19,0:20:9.81:0,10,124	0/0:26,0:27:12.99:0,13,155	1/1:10,13:23:31.85:202,32,0	0/0:23,0:23:4.04:0,4,51	0/1:7,3:10:0.89:30,0,1	1/1:12,7:19:19.88:119,20,0	1/1:4,4:8:10.92:56,11,0	1/1:4,2:8:9.17:39,9,0	1/1:8,5:14:18.38:90,18,0	1/1:10,14:25:52.62:247,53,0	1/1:4,19:23:26.81:159,27,0	0/1:18,12:30:9.49:113,0,9	1/1:10,5:15:10.16:55,10,0	1/1:0,5:5:8.52:42,9,0
chr10	16526549	.	T	TAA	6208.09	PASS	AB=1.000;AC=43;AF=0.768;AN=56;BaseQRankSum=8.133;DP=476;FS=5.579;HRun=13;HaplotypeScore=107.1829;InbreedingCoeff=0.7742;MQ=65.82;MQ0=7;MQRankSum=-5.088;QD=16.73;ReadPosRankSum=-5.204;VQSLOD=2.6238;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:21.53:0,22,331	1/1:1,2:3:6.02:81,6,0	0/1:50,0:19:6.49:6,0,75	0/0:34,0:17:1.35:0,1,22	1/1:9,10:28:54.79:582,55,0	1/1:3,6:10:14.84:172,15,0	1/1:12,7:18:20.98:257,21,0	1/1:12,5:20:42.44:485,42,0	1/1:11,7:20:13.77:394,14,0	1/1:9,4:15:24.96:279,25,0	1/1:7,6:15:36.43:402,36,0	0/0:6,0:6:5.74:0,6,47	1/1:8,2:10:20.81:203,21,0	1/1:2,2:7:11.93:125,12,0	0/0:20,0:21:38.46:0,38,331	0/0:13,0:13:26.82:0,27,238	1/1:12,5:17:26.30:276,26,0	0/0:13,0:13:32.92:0,33,290	1/1:14,4:20:32.47:335,32,0	1/1:7,6:15:21.82:321,22,0	1/1:4,4:8:3.01:41,3,0	1/1:9,9:19:39.02:458,39,0	1/1:9,5:14:20.34:238,20,0	1/1:5,6:13:17.68:182,18,0	1/1:4,13:18:39.07:495,39,0	1/1:9,8:17:33.04:399,33,0	1/1:18,4:24:41.02:406,41,0	1/1:1,2:5:8.71:70,9,0
chr10	16526945	.	TACGTACAC	T	7125.17	PASS	AC=40;AF=0.741;AN=54;BaseQRankSum=5.533;DP=500;FS=3.379;HRun=0;HaplotypeScore=129.6455;InbreedingCoeff=0.8020;MQ=74.28;MQ0=10;MQRankSum=-1.145;QD=23.28;ReadPosRankSum=-1.545;VQSLOD=3.7363;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:69.22:0,69,1530	1/1:3,0:3:2.97:20,3,0	0/0:29,0:20:60.17:0,60,1046	0/0:44,0:27:57.56:0,58,1159	1/1:0,14:15:6.02:172,6,0	1/1:11,0:11:2.73:85,3,0	1/1:18,0:18:48.06:668,48,0	1/1:16,0:16:45.04:603,45,0	1/1:18,0:18:30.89:374,31,0	1/1:1,20:21:57.17:872,57,0	1/1:0,9:10:5.15:151,5,0	0/0:23,0:23:17.38:0,17,1501	1/1:9,0:8:15.23:208,15,0	1/1:18,0:18:6:53,6,0	0/0:18,0:18:51.17:0,51,1427	0/0:18,0:18:51.16:0,51,1412	1/1:3,23:26:3.01:83,3,0	0/0:28,0:28:75.26:0,75,2025	1/1:17,0:17:30.63:596,31,0	1/1:8,0:8:15:180,15,0	1/1:21,0:21:11.75:352,12,0	1/1:21,0:21:2.84:85,3,0	./.	1/1:18,0:18:35.10:459,35,0	1/1:10,0:10:27.02:361,27,0	1/1:0,18:18:50.47:790,50,0	1/1:2,14:17:33.09:775,33,0	1/1:0,9:10:9.03:238,9,0
chr10	16526947	.	CGT	C	6611.92	PASS	AC=40;AF=0.741;AN=54;BaseQRankSum=5.056;DP=512;FS=0.443;HRun=0;HaplotypeScore=94.6907;InbreedingCoeff=0.8139;MQ=72.74;MQ0=10;MQRankSum=-0.872;QD=20.99;ReadPosRankSum=-0.567;VQSLOD=4.8888;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:68.89:0,69,1025	1/1:0,3:3:2.97:20,3,0	0/0:29,0:20:60.17:0,60,1017	0/0:43,0:26:57.92:0,58,1127	1/1:15,0:15:5.99:49,6,0	1/1:2,11:13:2.72:30,3,0	1/1:17,0:17:48.10:713,48,0	1/1:0,15:15:45.10:624,45,0	1/1:9,6:15:36.11:499,36,0	1/1:20,0:20:57.14:749,57,0	1/1:10,0:10:5.88:49,6,0	0/0:21,0:21:59.92:0,60,915	1/1:8,4:11:24.06:303,24,0	1/1:1,17:18:6.01:62,6,0	0/0:20,0:20:59.72:0,60,878	0/0:19,0:19:53.91:0,54,876	1/1:23,0:23:3.01:32,3,0	0/0:28,0:28:74.74:0,75,1236	1/1:1,17:18:42.64:697,43,0	1/1:8,3:11:15.05:202,15,0	1/1:18,3:21:42.13:595,42,0	1/1:1,20:21:3:31,3,0	./.	1/1:18,4:22:38.64:514,39,0	1/1:13,0:13:27.09:411,27,0	1/1:19,0:19:51.26:670,51,0	1/1:19,0:19:35.36:288,35,0	1/1:10,0:10:8.99:74,9,0
chr10	16526949	.	TAC	T	628.99	PASS	AB=0.911;AC=42;AF=0.875;AN=48;BaseQRankSum=7.623;DP=533;FS=4.159;HRun=0;HaplotypeScore=117.4862;InbreedingCoeff=-0.0043;MQ=69.32;MQ0=11;MQRankSum=-5.319;QD=1.51;ReadPosRankSum=-0.263;VQSLOD=2.0754;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:28,5:33:12.01:12,0,200	./.	./.	./.	1/1:15,0:15:5.68:28,6,0	1/1:14,0:14:2.67:14,3,0	1/1:18,0:18:2.98:21,3,0	1/1:16,0:16:2.95:19,3,0	1/1:16,0:16:14.07:78,14,0	1/1:20,0:20:5.68:28,6,0	1/1:10,0:10:5.56:28,6,0	0/1:19,1:21:26.14:26,0,194	1/1:14,0:13:2.60:15,3,0	1/1:20,0:20:5.09:30,5,0	0/1:19,2:21:30.02:30,0,369	0/1:18,1:19:6:6,0,290	1/1:23,0:23:2.68:11,3,0	0/0:29,2:31:6.01:0,6,413	1/1:19,0:19:2.57:25,3,0	1/1:11,0:11:2.60:10,3,0	1/1:23,0:23:4.83:34,5,0	1/1:23,0:22:5.68:35,6,0	1/1:8,0:8:2.96:19,3,0	1/1:24,0:23:5.47:31,5,0	./.	1/1:19,0:19:5.68:28,6,0	1/1:19,0:19:27.90:145,28,0	1/1:11,0:11:11.53:75,12,0
chr10	16526986	.	ACACG	A	2976.90	PASS	AB=1.000;AC=31;AF=0.554;AN=56;BaseQRankSum=2.601;DP=561;FS=17.573;HRun=0;HaplotypeScore=107.3981;InbreedingCoeff=0.5383;MQ=66.39;MQ0=13;MQRankSum=-3.460;QD=9.48;ReadPosRankSum=-0.306;VQSLOD=1.6046;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:65.95:0,66,932	0/0:3,0:3:5.95:0,6,44	0/0:32,0:15:30.94:0,31,390	0/0:34,0:21:38.01:0,38,431	0/1:13,0:13:16.66:17,0,66	1/1:16,0:16:32.93:287,33,0	1/1:27,0:27:65.64:535,66,0	1/1:16,0:16:35.07:368,35,0	1/1:14,6:20:41.99:421,42,0	0/1:11,0:11:0.39:0,0,130	0/1:13,0:13:10.26:10,0,94	0/0:30,0:30:61.21:0,61,812	1/1:14,2:15:16.70:113,17,0	1/1:16,2:18:23.45:205,23,0	0/0:27,0:27:71.95:0,72,1093	0/0:22,0:22:40.81:0,41,829	0/0:32,0:32:52.92:0,53,457	0/0:33,0:33:92.84:0,93,1356	1/1:18,0:17:14.57:270,15,0	1/1:6,2:8:3.01:41,3,0	1/1:30,1:30:47:508,47,0	1/1:9,0:9:9.72:120,10,0	1/1:10,1:11:6.27:65,6,0	1/1:23,4:26:6.02:81,6,0	0/1:10,0:10:0:0,0,0	0/1:17,0:17:2.61:3,0,142	0/1:22,0:22:99:114,0,142	0/1:11,0:11:14.22:14,0,61
chr10	16526988	.	ACG	A	3637.68	PASS	AB=0.750;AC=26;AF=0.464;AN=56;BaseQRankSum=1.340;DP=543;FS=30.218;HRun=0;HaplotypeScore=87.0796;InbreedingCoeff=0.8399;MQ=67.67;MQ0=11;MQRankSum=-1.576;QD=14.85;ReadPosRankSum=-0.048;VQSLOD=1.7197;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:58.59:0,59,698	0/0:3,0:3:5.95:0,6,44	0/0:31,0:16:34.15:0,34,404	0/0:33,0:21:37.55:0,38,430	0/0:13,0:13:10.48:0,10,81	1/1:13,1:14:32.93:271,33,0	1/1:27,0:27:71.84:604,72,0	1/1:19,0:19:56.99:520,57,0	1/1:21,0:21:47.96:426,48,0	0/0:11,0:11:25.47:0,25,178	0/0:14,0:14:17.10:0,17,139	0/0:25,0:25:56.06:0,56,628	1/1:2,13:15:15.86:102,16,0	1/1:14,0:14:29.49:260,29,0	0/0:26,0:26:34.33:0,34,679	0/0:21,0:21:43.48:0,43,600	0/0:32,0:32:67.78:0,68,490	0/0:32,0:32:73.53:0,74,937	1/1:16,1:16:18.25:315,18,0	1/1:3,5:8:3.01:34,3,0	1/1:35,0:34:83.88:730,84,0	1/1:6,1:7:17.97:172,18,0	1/1:10,0:10:14.95:134,15,0	1/1:5,22:26:6.02:66,6,0	0/1:0,9:9:0:0,0,0	0/0:13,0:13:24.97:0,25,172	0/1:22,0:22:2.33:2,0,158	0/0:10,0:10:3.21:0,3,56
chr10	16527396	.	CA	C	1329.58	PASS	AB=0.975;AC=18;AF=0.321;AN=56;BaseQRankSum=18.562;DP=646;FS=4.474;HRun=1;HaplotypeScore=86.7898;InbreedingCoeff=0.3495;MQ=79.84;MQ0=0;MQRankSum=-3.202;QD=4.32;ReadPosRankSum=3.395;VQSLOD=0.8889;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,123,1661	0/0:5,0:5:15.05:0,15,214	0/0:26,0:25:72.19:0,72,965	0/0:13,0:15:33.68:0,34,367	0/0:11,0:11:33.11:0,33,467	1/1:21,1:21:41.41:137,41,0	1/1:30,0:30:0.94:128,1,0	0/1:25,0:24:29.11:29,0,44	0/1:23,0:23:79.53:80,0,88	0/0:22,0:22:62.98:0,63,762	0/0:12,0:12:30.08:0,30,399	0/0:33,0:33:99:0,99,1323	0/1:27,0:27:33.08:147,0,33	1/1:18,2:20:25:160,25,0	0/0:26,0:26:78.19:0,78,1036	0/0:26,0:26:75.68:0,76,1007	0/0:29,0:29:74.55:0,75,1091	0/0:19,0:19:54.16:0,54,741	0/1:24,0:24:14.15:83,0,14	1/1:17,0:17:35.92:131,36,0	0/1:34,1:35:5.43:141,0,5	0/1:18,0:18:40.21:40,0,75	0/1:15,4:19:5.03:187,0,5	1/1:33,0:33:27.20:191,27,0	0/1:15,0:15:17.64:60,0,18	0/0:35,0:35:99:0,102,1358	0/0:28,0:28:84.23:0,84,1129	0/0:10,0:10:29.98:0,30,385
chr10	16527397	.	AC	A	7835.49	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=11.796;DP=650;FS=8.973;HRun=7;HaplotypeScore=66.7214;InbreedingCoeff=0.9902;MQ=79.14;MQ0=0;MQRankSum=-2.707;QD=25.03;ReadPosRankSum=-0.473;VQSLOD=4.8360;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,111,1380	0/0:5,0:5:15.05:0,15,189	0/0:26,0:25:66.12:0,66,790	0/0:14,0:14:10.59:0,11,277	0/0:11,0:11:33.09:0,33,401	1/1:1,21:22:57.13:582,57,0	1/1:3,27:30:78.17:796,78,0	1/1:2,23:25:66.05:640,66,0	1/1:3,18:21:16.38:482,16,0	0/0:22,1:23:45.13:0,45,549	0/0:12,0:12:27.09:0,27,339	0/0:34,0:34:93.27:0,93,1150	1/1:5,22:27:63.14:642,63,0	1/1:4,17:21:57.12:581,57,0	0/0:25,0:25:69.22:0,69,868	0/0:25,0:25:69.68:0,70,856	0/0:29,1:30:56.95:0,57,995	0/0:19,0:19:54.13:0,54,638	1/1:3,21:24:60.12:604,60,0	1/1:0,17:17:45.10:459,45,0	1/1:10,30:40:95.20:943,95,0	1/1:5,13:18:39.08:398,39,0	1/1:6,13:19:45.10:454,45,0	1/1:3,31:34:90.20:918,90,0	1/1:2,13:15:33.07:337,33,0	0/0:35,0:35:90.28:0,90,1121	0/0:28,0:28:75.23:0,75,930	0/0:10,0:10:30.10:0,30,377
chr10	16527883	.	T	TA	10577	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=-10.990;DP=581;FS=0.402;HRun=9;HaplotypeScore=54.7313;InbreedingCoeff=0.9754;MQ=64.08;MQ0=4;MQRankSum=0.886;QD=24.77;ReadPosRankSum=1.193;VQSLOD=5.5017;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:86.94:0,87,750	1/1:3,10:13:27.07:299,27,0	0/0:18,0:10:8.70:0,9,56	0/0:18,0:14:24.03:0,24,182	1/1:2,23:25:61.57:694,62,0	1/1:5,23:28:60.16:662,60,0	1/1:2,17:19:19.09:438,19,0	1/1:12,25:36:49.10:756,49,0	1/1:4,9:13:12.03:133,12,0	1/1:0,13:13:39.09:421,39,0	1/1:3,20:22:54.14:593,54,0	0/0:17,0:17:38.98:0,39,339	1/1:1,19:20:57.12:617,57,0	1/1:2,15:17:36.10:398,36,0	0/0:20,0:20:53.97:0,54,465	0/0:18,0:18:41.98:0,42,365	1/1:4,18:22:42.11:465,42,0	0/0:27,0:27:59.97:0,60,521	1/1:5,13:18:38.96:402,39,0	1/1:0,14:14:33.05:352,33,0	1/1:0,4:4:12.03:133,12,0	1/1:2,10:12:27.07:299,27,0	1/1:3,18:20:39.11:432,39,0	1/1:2,18:19:42.11:465,42,0	1/1:1,29:30:72.19:797,72,0	1/1:2,24:26:72.19:796,72,0	1/1:1,22:23:57.13:630,57,0	1/1:0,29:29:72.19:796,72,0
chr10	16528024	.	G	GTCCT	9233.84	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-9.980;DP=429;FS=41.420;HRun=0;HaplotypeScore=83.5505;InbreedingCoeff=0.9318;MQ=76.93;MQ0=0;MQRankSum=-4.203;QD=43.76;ReadPosRankSum=2.397;VQSLOD=3.2720;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:24:69.21:0,69,1296	0/0:3,0:6:8.96:0,9,103	0/0:12,0:17:41.50:0,42,646	0/0:11,0:12:23.89:0,24,517	0/0:3,0:5:8.89:0,9,77	1/1:1,18:19:33.11:855,33,0	1/1:4,23:31:60.30:1741,60,0	1/1:2,19:24:63.65:1064,64,0	1/1:3,10:14:27.09:662,27,0	0/0:3,0:8:14.65:0,15,210	0/0:3,0:8:5.85:0,6,60	0/0:17,0:18:51.63:0,52,894	1/1:2,11:13:21.07:591,21,0	1/1:1,11:13:23.75:682,24,0	0/0:13,0:15:42.13:0,42,763	0/0:18,0:18:50.73:0,51,895	0/0:7,0:20:33.44:0,33,319	0/0:23,0:24:72.25:0,72,1372	1/1:0,6:9:27.06:471,27,0	1/1:2,6:11:15.05:393,15,0	1/1:5,17:30:33.11:823,33,0	1/1:1,5:9:6.02:173,6,0	1/1:0,9:9:15.05:343,15,0	1/1:3,14:21:44.92:1226,45,0	1/1:0,6:7:9.03:209,9,0	0/0:18,0:24:41.45:0,41,719	0/0:4,0:9:11.98:0,12,107	0/0:2,0:9:14.91:0,15,142
chr10	16528559	.	A	AT	2002.06	PASS	AB=0.986;AC=34;AF=0.607;AN=56;BaseQRankSum=8.300;DP=448;FS=52.158;HRun=0;HaplotypeScore=93.2750;InbreedingCoeff=0.1998;MQ=60.07;MQ0=5;MQRankSum=-2.991;QD=5.82;ReadPosRankSum=4.507;VQSLOD=1.5043;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:34:73.98:0,74,653	1/1:8,0:8:3.44:54,3,0	0/1:38,0:10:0.28:0,0,55	0/1:21,0:8:2.73:3,0,32	1/1:16,1:17:7.17:138,7,0	1/1:19,0:19:42.24:227,42,0	0/1:20,0:20:0.03:202,0,0	1/1:23,1:24:43.64:268,44,0	0/1:9,0:9:2.88:106,0,3	1/1:10,1:11:19.78:121,20,0	1/1:5,0:5:14.36:75,14,0	0/0:13,0:13:33.40:0,33,238	0/1:14,0:14:12.72:63,0,13	0/1:16,0:16:47.22:55,0,47	0/0:21,0:21:58.53:0,59,515	0/0:17,0:17:49.18:0,49,373	1/1:18,0:18:23.11:142,23,0	0/0:18,0:18:49.33:0,49,383	0/1:19,0:19:18.95:87,0,19	1/1:12,0:12:3.07:65,3,0	1/1:5,0:5:9.55:52,10,0	0/1:12,0:12:7.65:50,0,8	0/1:8,1:9:7.59:65,0,8	0/1:12,0:12:27.40:27,0,36	0/1:13,0:13:1.35:76,0,1	0/1:12,1:13:18.10:103,0,18	1/1:22,0:22:13.41:141,13,0	1/1:7,0:7:5.23:56,5,0
chr10	16528562	.	A	ATT	6368.12	PASS	AB=1.000;AC=41;AF=0.732;AN=56;BaseQRankSum=7.370;DP=469;FS=12.646;HRun=0;HaplotypeScore=95.5576;InbreedingCoeff=0.7867;MQ=59.89;MQ0=6;MQRankSum=-1.135;QD=20.95;ReadPosRankSum=5.635;VQSLOD=4.6559;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:32:79.26:0,79,1180	1/1:1,8:9:24.06:326,24,0	0/0:39,0:9:17.56:0,18,112	0/0:22,0:9:9.81:0,10,50	1/1:7,12:20:26.81:546,27,0	1/1:17,0:17:49.64:429,50,0	1/1:19,0:19:25.43:448,25,0	1/1:22,0:22:57.57:495,58,0	1/1:7,0:7:19.62:158,20,0	1/1:4,8:14:28.84:381,29,0	1/1:5,5:10:11.61:203,12,0	0/0:14,0:14:36.04:0,36,456	0/1:13,0:13:20.65:144,0,21	1/1:15,0:15:24.30:192,24,0	0/0:21,0:21:63.20:0,63,910	0/0:17,0:17:51.12:0,51,691	1/1:4,13:21:35.77:477,36,0	0/0:19,0:19:54.13:0,54,751	1/1:19,0:19:6.37:308,6,0	1/1:13,0:13:21.61:234,22,0	1/1:3,0:3:8.51:73,9,0	1/1:13,0:13:26.52:185,27,0	1/1:9,0:9:2.19:166,2,0	1/1:11,0:11:28.23:198,28,0	1/1:12,0:12:30.34:211,30,0	1/1:7,11:20:44.45:606,44,0	1/1:4,17:24:9.54:390,10,0	1/1:7,5:13:0.57:199,1,0
chr10	16528628	.	AT	A	5788.52	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=8.061;DP=552;FS=0.692;HRun=10;HaplotypeScore=78.3897;InbreedingCoeff=0.9983;MQ=70.95;MQ0=0;MQRankSum=-0.361;QD=21.36;ReadPosRankSum=-0.589;VQSLOD=5.3568;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,1:31:61.18:0,61,903	0/0:14,0:14:33.09:0,33,364	0/0:14,0:13:23.38:0,23,209	0/0:12,0:12:19.80:0,20,181	0/0:26,1:28:48.96:0,49,738	1/1:1,12:13:35.98:309,36,0	1/1:3,20:23:53.01:449,53,0	1/1:6,25:31:71.90:614,72,0	1/1:2,17:19:50.98:443,51,0	0/0:20,1:22:27.89:0,28,506	0/0:19,0:19:51.14:0,51,564	0/0:11,0:11:33.09:0,33,365	1/1:2,16:18:53.03:449,53,0	1/1:2,14:16:44.97:388,45,0	0/0:16,0:16:42.11:0,42,465	0/0:17,0:17:49.33:0,49,521	0/0:19,0:19:45.12:0,45,497	0/0:13,0:13:33.09:0,33,365	1/1:4,14:19:46.05:377,46,0	1/1:3,30:33:35.44:698,35,0	1/1:0,8:8:24:208,24,0	1/1:2,16:18:47.98:416,48,0	1/1:5,19:24:44.96:391,45,0	1/1:3,17:20:47.98:417,48,0	1/1:3,25:29:74.01:631,74,0	0/0:23,1:24:35.31:0,35,594	0/0:20,0:20:39.10:0,39,424	0/0:19,0:19:48.09:0,48,511
chr10	16529493	.	CT	C	8983.50	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=12.626;DP=545;FS=0.000;HRun=1;HaplotypeScore=56.7786;InbreedingCoeff=0.9986;MQ=76.40;MQ0=0;MQRankSum=-1.402;QD=35.79;ReadPosRankSum=0.563;VQSLOD=4.7213;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:99:0,99,1445	0/0:12,0:12:36.12:0,36,549	0/0:17,0:17:48.08:0,48,636	0/0:7,0:7:20.65:0,21,198	0/0:13,0:13:39.12:0,39,574	1/1:0,10:10:30.10:418,30,0	1/1:0,17:17:51.17:710,51,0	1/1:0,35:35:99:1354,102,0	1/1:0,21:21:54.18:751,54,0	0/0:16,0:16:45.15:0,45,672	0/0:19,0:19:54.14:0,54,759	0/0:24,0:24:72.23:0,72,1076	1/1:0,15:15:39.13:542,39,0	1/1:1,21:22:54.18:746,54,0	0/0:25,0:25:72.24:0,72,1101	0/0:26,0:26:78.26:0,78,1191	0/0:24,0:23:72.18:0,72,1030	0/0:22,0:22:66.18:0,66,981	1/1:0,19:19:54.11:726,54,0	1/1:0,20:20:57.12:768,57,0	1/1:0,17:17:36.12:502,36,0	1/1:0,21:21:54.18:751,54,0	1/1:0,16:16:33.11:461,33,0	1/1:0,24:24:60.20:837,60,0	1/1:0,14:14:30.10:418,30,0	0/0:17,0:17:51.17:0,51,781	0/0:32,0:32:96.31:0,96,1444	0/0:7,0:7:21.07:0,21,321
chr10	16529650	.	TG	T	2533.56	PASS	AB=0.996;AC=30;AF=0.536;AN=56;BaseQRankSum=13.594;DP=653;FS=8.248;HRun=1;HaplotypeScore=136.9423;InbreedingCoeff=0.1933;MQ=53.40;MQ0=20;MQRankSum=-5.709;QD=6.26;ReadPosRankSum=4.968;VQSLOD=0.4742;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:76.76:0,77,1007	0/1:8,0:7:11.26:35,0,11	0/0:58,4:15:29.68:0,30,339	0/0:68,3:23:17.56:0,18,165	1/1:24,0:24:13.25:185,13,0	0/1:12,0:12:11.03:72,0,11	0/1:15,0:15:17.43:44,0,17	0/1:25,0:25:16.80:67,0,17	0/1:26,0:26:19.21:152,0,19	1/1:18,0:18:32.75:123,33,0	1/1:11,0:11:22.35:107,22,0	0/0:15,0:15:45.14:0,45,596	0/1:17,0:17:70.09:85,0,70	1/1:13,0:13:10.16:109,10,0	0/0:22,0:22:66.17:0,66,844	0/0:21,0:21:47.56:0,48,637	0/1:33,0:33:1.63:196,0,2	0/0:27,0:27:68.80:0,69,962	0/1:21,1:22:24.15:117,0,24	1/1:19,1:20:18.95:206,19,0	0/1:18,0:18:15.10:106,0,15	0/1:18,0:18:25.87:121,0,26	0/1:13,0:13:2.66:95,0,3	1/1:30,0:29:39.77:198,40,0	0/1:22,0:22:17.49:140,0,17	1/1:20,0:20:42.80:188,43,0	1/1:31,1:32:56.97:307,57,0	1/1:8,0:8:19.26:73,19,0
chr10	16529651	.	GT	G	10178.85	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=7.056;DP=660;FS=5.229;HRun=7;HaplotypeScore=113.8235;InbreedingCoeff=0.9863;MQ=53.11;MQ0=22;MQRankSum=-3.281;QD=25.38;ReadPosRankSum=1.846;VQSLOD=4.4435;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:78.71:0,79,961	1/1:3,5:7:12.02:122,12,0	0/0:60,0:16:28.84:0,29,313	0/0:75,0:23:20:0,20,205	1/1:8,17:25:42.45:577,42,0	1/1:3,9:12:27.05:275,27,0	1/1:3,11:14:36.08:367,36,0	1/1:2,22:24:63.06:617,63,0	1/1:7,19:26:43.88:638,44,0	1/1:4,14:18:51.11:519,51,0	1/1:2,9:11:13.22:258,13,0	0/0:15,0:15:45.13:0,45,552	1/1:8,9:17:30.53:307,31,0	1/1:3,10:13:36.07:362,36,0	0/0:23,0:23:60.18:0,60,740	0/0:21,0:21:53.86:0,54,646	1/1:10,24:34:70.30:857,70,0	0/0:29,0:29:82.68:0,83,931	1/1:5,15:20:45.09:455,45,0	1/1:3,17:20:53.90:531,54,0	1/1:4,14:18:44.31:437,44,0	1/1:3,14:17:45.01:437,45,0	1/1:2,11:13:16.72:338,17,0	1/1:4,24:28:75.14:758,75,0	1/1:3,19:22:45.61:565,46,0	1/1:8,13:21:56.70:572,57,0	1/1:5,27:32:93.19:941,93,0	1/1:1,7:8:24.05:245,24,0
chr10	16529689	.	GTTTT	G	6784.55	PASS	AB=0.978;AC=27;AF=0.482;AN=56;BaseQRankSum=2.927;DP=729;FS=5.636;HRun=13;HaplotypeScore=174.7143;InbreedingCoeff=0.8996;MQ=54.05;MQ0=32;MQRankSum=-5.135;QD=18.95;ReadPosRankSum=-1.126;VQSLOD=1.5337;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:30:56.04:0,56,1527	0/0:2,0:9:18.53:0,19,137	0/0:85,0:13:9.41:0,9,101	0/1:86,0:25:35.88:36,0,52	0/0:6,0:30:74.14:0,74,438	1/1:5,7:12:10.59:393,11,0	1/1:3,10:13:11.99:147,12,0	1/1:19,4:23:48.09:637,48,0	1/1:6,12:18:32.31:552,32,0	0/0:7,0:20:32.17:0,32,331	0/0:4,0:18:41.02:0,41,250	0/0:12,0:12:27.07:0,27,527	1/1:9,14:23:8.55:360,9,0	1/1:3,14:17:24.94:346,25,0	0/0:14,0:21:33.10:0,33,608	0/0:17,0:17:41.84:0,42,791	0/0:13,0:32:66.06:0,66,408	0/0:27,0:28:72.11:0,72,1381	1/1:19,7:26:41.76:578,42,0	1/1:7,26:33:68.70:1102,69,0	1/1:5,13:18:30.01:382,30,0	1/1:9,5:16:37.28:468,37,0	1/1:6,16:21:44.73:609,45,0	1/1:8,13:21:37.66:436,38,0	1/1:5,18:23:54.08:739,54,0	0/0:6,0:23:52.45:0,52,309	0/0:19,0:35:76.39:0,76,512	0/0:2,0:8:17.62:0,18,112
chr10	16529701	.	TTG	T	1017.44	PASS	AB=0.993;AC=17;AF=0.304;AN=56;BaseQRankSum=8.446;DP=664;FS=13.825;HRun=0;HaplotypeScore=150.2181;InbreedingCoeff=0.1065;MQ=51.37;MQ0=27;MQRankSum=-5.582;QD=4.09;ReadPosRankSum=6.815;VQSLOD=1.4085;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:31:72.65:0,73,988	1/1:10,0:10:0.76:35,1,0	0/0:63,0:9:6.59:0,7,99	0/0:73,0:17:2.99:0,3,112	1/1:26,2:28:37.40:236,37,0	0/1:11,0:11:7.79:8,0,26	0/0:11,0:11:0.67:0,1,24	0/0:23,0:22:32.23:0,32,167	0/1:16,0:16:9.91:10,0,35	0/1:22,0:22:25.35:25,0,168	0/1:18,0:18:32.58:92,0,33	0/0:10,0:10:23.85:0,24,272	0/1:22,0:22:40.57:51,0,41	1/1:15,0:15:10.28:46,10,0	0/0:19,0:19:16.63:0,17,392	0/0:17,0:17:34.24:0,34,504	0/1:26,2:28:23.10:205,0,23	0/0:30,0:30:69.75:0,70,803	0/0:22,0:21:35.35:0,35,229	0/0:35,0:35:8.03:0,8,133	0/0:21,0:21:17.64:0,18,107	0/0:16,0:16:5.65:0,6,66	0/1:21,0:20:11.87:12,0,21	0/0:20,0:20:5.44:0,5,73	0/0:23,0:23:11.81:0,12,78	0/1:23,0:22:65.87:66,0,79	1/1:24,4:28:7.77:355,8,0	0/1:7,0:7:7.21:40,0,7
chr10	16531770	.	G	GT	9093.92	PASS	AB=0.605;AC=36;AF=0.643;AN=56;BaseQRankSum=-2.099;DP=555;FS=0.812;HRun=10;HaplotypeScore=74.3223;InbreedingCoeff=0.5513;MQ=72.90;MQ0=2;MQRankSum=-0.726;QD=21.97;ReadPosRankSum=-0.025;VQSLOD=5.5350;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,1:38:60.82:0,61,697	0/1:3,2:5:15.62:55,0,16	0/0:14,0:12:7.98:0,8,110	0/0:16,0:13:5.95:0,6,95	1/1:4,20:24:47.99:483,48,0	1/1:1,14:15:42.11:448,42,0	0/1:6,18:24:1.16:400,0,1	1/1:11,32:43:71.53:933,72,0	0/1:4,12:16:4.36:313,0,4	1/1:4,17:21:51.11:529,51,0	1/1:5,13:18:17.46:389,17,0	0/0:22,0:22:41.91:0,42,342	0/1:4,10:14:5.33:170,0,5	1/1:3,7:10:23.89:238,24,0	0/0:17,0:18:46.98:0,47,375	0/0:13,0:13:4.27:0,4,239	1/1:6,24:29:7.27:694,7,0	0/0:20,0:20:53.87:0,54,434	1/1:5,20:25:60.12:623,60,0	1/1:3,20:24:38.25:572,38,0	1/1:1,9:10:27.07:288,27,0	1/1:3,11:14:8.72:295,9,0	1/1:4,18:22:42.11:448,42,0	1/1:3,8:11:24.06:256,24,0	1/1:3,22:25:63.16:671,63,0	0/1:7,22:29:17.53:599,0,18	0/1:5,8:13:1.48:171,0,1	1/1:4,17:21:29.49:519,29,0
chr10	16533345	.	CG	C	2181.28	PASS	AB=0.882;AC=43;AF=0.768;AN=56;BaseQRankSum=1.571;DP=258;FS=4.648;HRun=6;HaplotypeScore=60.3469;InbreedingCoeff=0.6732;MQ=83.81;MQ0=1;MQRankSum=-3.635;QD=10.80;ReadPosRankSum=3.621;VQSLOD=1.0544;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:21.41:0,21,203	1/1:3,1:4:6.01:62,6,0	0/0:17,0:17:25.53:0,26,262	0/1:13,0:11:1.55:2,0,68	1/1:6,5:11:26.99:246,27,0	1/1:6,6:12:23.54:189,24,0	1/1:14,7:20:37.64:321,38,0	1/1:12,4:16:17.94:168,18,0	1/1:2,2:4:5.98:49,6,0	1/1:7,2:9:7.52:78,8,0	1/1:5,2:7:5.89:40,6,0	0/0:9,0:9:17.89:0,18,210	1/1:3,3:6:11.73:91,12,0	1/1:6,1:7:2.75:17,3,0	0/0:3,0:3:5.98:0,6,59	0/0:8,0:8:21.02:0,21,220	1/1:13,3:16:11.99:115,12,0	0/0:8,0:8:13.23:0,13,126	1/1:5,7:12:27.05:270,27,0	1/1:1,0:1:2.99:23,3,0	1/1:4,2:6:3:29,3,0	1/1:3,1:4:2.96:19,3,0	1/1:1,2:3:8.67:52,9,0	1/1:12,3:15:15.02:147,15,0	1/1:1,3:4:3.01:32,3,0	1/1:7,1:8:9.01:85,9,0	1/1:6,7:13:24.05:206,24,0	1/1:8,0:8:15.63:118,16,0
chr10	16533356	.	GGGGT	G	2630.65	PASS	AB=1.000;AC=42;AF=0.750;AN=56;BaseQRankSum=4.352;DP=209;FS=24.079;HRun=0;HaplotypeScore=80.3927;InbreedingCoeff=0.6096;MQ=75.18;MQ0=1;MQRankSum=-7.183;QD=16.14;ReadPosRankSum=-1.711;VQSLOD=1.3944;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:6,0:6:1.50:1,0,126	1/1:1,0:1:3.01:45,3,0	0/0:16,0:16:33.70:0,34,456	0/0:9,0:5:11.40:0,11,208	1/1:14,0:14:9.92:118,10,0	1/1:6,2:8:23.96:310,24,0	1/1:12,1:12:25.05:265,25,0	1/1:13,0:13:17.41:172,17,0	1/1:8,1:9:26.81:279,27,0	1/1:5,0:5:5.60:38,6,0	1/1:5,1:6:4.91:62,5,0	0/0:4,0:4:12.04:0,12,261	1/1:6,1:7:14.92:175,15,0	1/1:6,0:6:12.42:117,12,0	0/1:2,0:2:13.92:14,0,41	0/0:7,0:7:18.06:0,18,373	1/1:11,0:11:26.50:205,27,0	0/0:6,0:6:9.75:0,10,248	1/1:6,1:7:11.96:141,12,0	1/1:3,0:3:2.94:20,3,0	1/1:4,0:4:5.98:69,6,0	1/1:5,0:5:6.02:74,6,0	1/1:3,0:3:9.03:125,9,0	1/1:10,0:10:3.01:37,3,0	0/0:4,0:4:0.36:0,0,1	1/1:12,0:12:20.19:119,20,0	1/1:12,0:12:26.09:271,26,0	1/1:6,0:6:17.66:144,18,0
chr10	16533357	.	GGGT	G	2543.29	PASS	AB=1.000;AC=44;AF=0.786;AN=56;BaseQRankSum=4.769;DP=226;FS=23.473;HRun=0;HaplotypeScore=84.3808;InbreedingCoeff=0.5944;MQ=71.77;MQ0=1;MQRankSum=-6.585;QD=13.75;ReadPosRankSum=-2.238;VQSLOD=1.3614;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:7,0:7:3.25:3,0,103	1/1:1,0:1:3.01:44,3,0	0/0:15,0:15:29.62:0,30,374	0/0:9,0:5:11.83:0,12,178	1/1:12,2:14:12.35:105,12,0	1/1:4,5:9:23.91:257,24,0	1/1:11,3:13:31.08:288,31,0	1/1:13,2:15:20.47:177,20,0	1/1:6,3:9:26.78:253,27,0	1/1:5,0:5:5.50:36,5,0	1/1:7,1:8:4.35:51,4,0	0/0:4,0:4:12.04:0,12,208	1/1:4,4:8:17.54:152,18,0	1/1:5,2:7:12.80:100,13,0	0/1:2,0:2:13.95:14,0,26	0/0:7,0:7:18.05:0,18,302	1/1:11,0:11:28.85:235,29,0	0/0:6,0:6:5.89:0,6,180	1/1:9,1:10:17.72:148,18,0	1/1:6,0:6:3.77:21,4,0	1/1:6,1:7:6.86:63,7,0	1/1:3,2:5:6.01:63,6,0	1/1:0,3:3:9:91,9,0	1/1:8,2:10:5.97:52,6,0	1/1:5,0:5:2.09:18,2,0	1/1:12,0:12:22.01:125,22,0	1/1:10,1:11:26.88:270,27,0	1/1:5,1:6:17.66:148,18,0
chr10	16533358	.	GGT	G	2176.38	PASS	AB=1.000;AC=45;AF=0.804;AN=56;BaseQRankSum=4.538;DP=220;FS=24.303;HRun=0;HaplotypeScore=80.6104;InbreedingCoeff=0.5264;MQ=72.25;MQ0=1;MQRankSum=-7.068;QD=11.76;ReadPosRankSum=-2.652;VQSLOD=1.2795;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:7,0:7:4.86:5,0,76	1/1:0,1:1:3.01:32,3,0	0/0:15,0:15:33.56:0,34,323	0/0:9,0:5:10.27:0,10,134	1/1:12,2:14:12.26:86,12,0	1/1:9,0:9:23.64:196,24,0	1/1:14,0:13:30.99:235,31,0	1/1:13,0:13:20.47:159,20,0	1/1:9,0:9:26.40:209,26,0	1/1:4,1:5:5.60:38,6,0	1/1:7,1:8:4.59:51,5,0	0/0:4,0:4:11.93:0,12,156	1/1:7,0:7:17.41:130,17,0	1/1:7,0:7:11.71:73,12,0	0/1:2,0:2:10.47:14,0,10	0/0:7,0:7:18.03:0,18,235	1/1:10,1:11:29.06:230,29,0	0/1:6,0:6:5.01:5,0,123	1/1:7,0:7:17.72:129,18,0	1/1:6,0:6:3.84:21,4,0	1/1:7,0:7:6.86:52,7,0	1/1:5,0:5:5.96:44,6,0	1/1:3,0:3:8.94:71,9,0	1/1:10,0:10:5.95:43,6,0	1/1:5,0:5:2.85:19,3,0	1/1:11,1:12:21.76:124,22,0	1/1:8,3:11:26.90:241,27,0	1/1:6,0:6:17.83:137,18,0
chr10	16533369	.	AG	A	4711.38	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=5.049;DP=218;FS=45.014;HRun=8;HaplotypeScore=72.3380;InbreedingCoeff=0.8598;MQ=61.22;MQ0=0;MQRankSum=-6.194;QD=27.08;ReadPosRankSum=-1.102;VQSLOD=1.8052;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:7:15.05:0,15,219	1/1:1,2:3:9.02:106,9,0	0/0:10,0:10:14.67:0,15,258	0/0:8,0:5:12.04:0,12,191	1/1:3,13:15:23.81:214,24,0	1/1:0,10:10:22.49:288,22,0	1/1:0,9:9:24.07:295,24,0	1/1:1,13:13:39.13:506,39,0	1/1:1,10:11:33.06:382,33,0	1/1:0,4:4:12.03:141,12,0	1/1:1,7:8:5.42:86,5,0	0/0:5,0:5:15.05:0,15,216	1/1:1,7:8:20.45:181,20,0	1/1:1,5:6:17.78:145,18,0	0/0:2,0:2:3.01:0,3,47	0/0:7,0:7:18.06:0,18,287	1/1:0,12:12:30.06:363,30,0	0/0:5,0:5:12.01:0,12,165	1/1:0,10:10:30.02:335,30,0	1/1:0,8:8:23.96:252,24,0	1/1:0,6:6:11.93:114,12,0	1/1:0,4:4:11.99:127,12,0	1/1:0,5:5:5.98:57,6,0	1/1:2,8:9:15.05:178,15,0	1/1:0,6:6:8.98:108,9,0	1/1:0,10:10:29.99:336,30,0	1/1:0,8:9:24.04:308,24,0	1/1:0,5:5:15.05:190,15,0
chr10	16533396	.	ATTT	A	3452.99	PASS	AB=0.640;AC=29;AF=0.518;AN=56;BaseQRankSum=4.828;DP=287;FS=43.642;HRun=14;HaplotypeScore=77.4332;InbreedingCoeff=0.0532;MQ=55.52;MQ0=19;MQRankSum=-3.547;QD=16.21;ReadPosRankSum=4.728;VQSLOD=-0.7198;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:14:30.10:0,30,437	0/1:1,2:4:32.07:61,0,32	0/0:13,0:6:14.21:0,14,143	0/0:10,0:6:12.04:0,12,160	0/1:3,14:17:0.66:381,0,1	0/1:4,10:12:32.35:221,0,32	1/1:4,6:6:15.04:175,15,0	1/1:8,3:7:8.96:105,9,0	1/1:3,5:8:15.01:175,15,0	0/1:4,2:6:32.33:89,0,32	0/1:1,4:8:40.71:121,0,41	0/0:8,0:8:21.07:0,21,351	0/1:5,5:9:19.21:148,0,19	1/1:6,6:9:11.97:138,12,0	0/0:5,0:5:15.05:0,15,268	0/0:8,0:9:15.05:0,15,269	0/1:7,12:19:64.74:326,0,65	0/0:7,0:11:20.55:0,21,306	0/1:6,7:13:36.62:174,0,37	0/1:2,5:7:19.27:155,0,19	1/1:3,6:7:12.04:140,12,0	0/1:1,5:7:20.48:157,0,20	1/1:3,3:5:9:105,9,0	1/1:1,7:8:17.38:209,17,0	0/1:3,8:10:12.15:253,0,12	0/1:4,6:9:21.53:157,0,22	0/1:7,5:12:65.48:90,0,65	1/1:2,2:2:6.02:70,6,0
chr10	16533505	.	A	ATTT	2470.75	PASS	AB=0.750;AC=34;AF=0.654;AN=52;BaseQRankSum=0.481;DP=240;FS=14.556;HRun=12;HaplotypeScore=36.9698;InbreedingCoeff=0.4111;MQ=63.57;MQ0=11;MQRankSum=-3.530;QD=14.20;ReadPosRankSum=-0.230;VQSLOD=0.1817;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:15,2:19:14.36:14,0,387	0/1:1,0:1:0:0,0,0	0/0:12,0:6:4.85:0,5,54	0/0:7,0:3:5.94:0,6,53	1/1:6,0:6:11.79:95,12,0	1/1:4,5:10:12.02:188,12,0	0/1:6,5:11:1.78:207,0,2	0/1:7,2:8:11.68:101,0,12	1/1:2,4:6:6.02:110,6,0	0/1:3,0:5:34.10:40,0,34	0/1:3,0:3:0:0,0,0	0/0:11,0:10:17.88:0,18,202	1/1:2,3:4:3.01:55,3,0	1/1:1,2:3:5.60:77,6,0	0/0:8,0:7:15.02:0,15,168	0/0:3,0:3:6.02:0,6,67	1/1:8,1:13:17.81:219,18,0	0/0:20,0:20:1:0,1,395	1/1:6,4:11:21.02:281,21,0	1/1:1,4:6:12.02:188,12,0	1/1:2,1:4:6:78,6,0	./.	1/1:2,0:2:5.98:55,6,0	1/1:5,7:11:18.04:298,18,0	1/1:8,6:13:24.06:353,24,0	1/1:6,1:8:6.02:98,6,0	1/1:7,0:10:12.51:171,13,0	./.
chr10	16533819	.	C	CA	2209.93	PASS	AB=0.683;AC=33;AF=0.589;AN=56;BaseQRankSum=-3.248;DP=414;FS=14.407;HRun=14;HaplotypeScore=57.9800;InbreedingCoeff=0.4447;MQ=65.84;MQ0=5;MQRankSum=-0.273;QD=7.73;ReadPosRankSum=0.123;VQSLOD=0.8664;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:9,15:24:17.49:225,17,0	0/1:2,1:3:13.27:20,0,13	0/0:18,1:10:8.70:0,9,53	0/0:12,0:7:15.10:0,15,80	0/0:11,1:12:17.68:0,18,115	1/1:5,3:17:26.04:164,26,0	0/1:8,1:15:9.40:112,0,9	1/1:7,6:16:24.05:176,24,0	1/1:9,4:22:18.65:160,19,0	0/0:12,1:13:3.13:0,3,147	0/0:4,0:6:16.08:0,16,90	0/1:7,10:18:2.15:128,0,2	1/1:6,1:12:7.60:46,8,0	1/1:7,0:11:10.66:80,11,0	0/1:4,12:16:0.93:227,0,1	0/1:5,10:16:22.31:172,0,22	0/0:34,1:39:46.76:0,47,400	1/1:8,18:26:0.47:249,0,0	1/1:12,2:21:29.07:194,29,0	1/1:3,2:8:11.64:74,12,0	1/1:3,1:8:5.84:41,6,0	0/1:3,0:6:7.75:31,0,8	1/1:5,2:13:13.24:73,13,0	1/1:6,2:15:12.40:124,12,0	1/1:1,2:8:14.52:95,15,0	0/0:10,0:12:18.77:0,19,108	0/0:13,0:12:23.40:0,23,147	0/1:6,1:6:11.56:12,0,62
chr10	16534787	.	A	AC	19133.23	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=-14.491;DP=678;FS=14.614;HRun=1;HaplotypeScore=69.7643;InbreedingCoeff=0.9969;MQ=78.50;MQ0=0;MQRankSum=-6.329;QD=39.53;ReadPosRankSum=1.899;VQSLOD=4.0571;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,150,1914	1/1:0,10:10:27.09:404,27,0	0/0:20,0:19:56.90:0,57,697	0/0:37,0:37:99:0,102,1268	1/1:2,27:30:78.12:1106,78,0	1/1:1,27:28:66.22:989,66,0	1/1:0,24:24:69.15:1006,69,0	1/1:0,30:30:90.29:1325,90,0	1/1:0,14:14:39.13:584,39,0	1/1:1,27:27:78.19:1120,78,0	1/1:1,20:21:45.15:667,45,0	0/0:11,0:11:33.11:0,33,428	1/1:1,18:19:51.17:763,51,0	1/1:0,18:18:48.16:719,48,0	0/0:26,0:26:78.24:0,78,998	0/0:28,0:28:81.23:0,81,1010	1/1:0,28:28:75.25:1123,75,0	0/0:21,0:21:54.15:0,54,682	1/1:4,29:33:87.29:1298,87,0	1/1:1,22:23:60.20:892,60,0	1/1:1,25:26:72.24:1078,72,0	1/1:0,27:27:78.16:1139,78,0	1/1:0,25:24:56.85:819,57,0	1/1:0,19:19:54.18:809,54,0	1/1:0,22:22:57.19:854,57,0	1/1:0,26:26:75.23:1093,75,0	1/1:1,25:26:75.25:1121,75,0	1/1:0,7:7:15.05:225,15,0
chr10	16536595	.	AAGAGAG	A	399.41	PASS	AB=0.865;AC=7;AF=0.130;AN=54;BaseQRankSum=0.440;DP=581;FS=0.000;HRun=0;HaplotypeScore=136.0056;InbreedingCoeff=0.5124;MQ=71.86;MQ0=13;MQRankSum=-2.975;QD=4.03;ReadPosRankSum=0.563;VQSLOD=2.1431;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:38,7:45:31.76:60,0,32	0/0:6,0:6:6.02:0,6,118	./.	0/0:61,0:31:0:0,0,0	0/0:11,0:11:6.01:0,6,92	0/0:12,0:12:12.04:0,12,248	0/0:33,0:33:33.11:0,33,594	0/0:23,0:23:17.54:0,18,211	0/0:19,0:19:23.99:0,24,350	0/0:12,0:12:15.01:0,15,262	0/0:14,0:13:0:0,0,0	1/1:14,3:17:5.68:83,6,0	0/0:11,0:12:12.04:0,12,190	0/0:19,0:19:12.04:0,12,254	0/0:19,0:25:1.61:0,2,81	1/1:9,7:17:15.01:239,15,0	0/0:21,0:17:12:0,12,239	1/1:14,6:20:9.02:146,9,0	0/0:18,0:18:15.89:0,16,218	0/0:16,0:16:12.04:0,12,200	0/0:32,0:31:36.12:0,36,804	0/0:18,0:17:12.03:0,12,273	0/0:11,0:11:3.01:0,3,62	0/0:28,0:27:32.10:0,32,529	0/0:12,0:11:6.02:0,6,121	0/0:20,0:20:27.56:0,28,409	0/0:13,0:12:6.02:0,6,85	0/0:9,0:8:6.02:0,6,110
chr10	16539157	.	ATG	A	14464.87	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=17.669;DP=590;FS=2.514;HRun=0;HaplotypeScore=170.6465;InbreedingCoeff=0.9827;MQ=78.59;MQ0=0;MQRankSum=-17.721;QD=34.69;ReadPosRankSum=1.985;VQSLOD=6.3876;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,120,2211	1/1:1,5:6:12.04:183,12,0	0/0:22,0:22:63.18:0,63,1144	0/0:23,0:23:69.20:0,69,1159	1/1:2,15:17:33.11:500,33,0	1/1:5,14:19:36.12:549,36,0	1/1:8,16:24:45.15:686,45,0	1/1:5,24:29:72.23:1079,72,0	1/1:2,12:14:33.11:504,33,0	1/1:2,22:24:66.18:982,66,0	1/1:3,11:14:33.11:502,33,0	0/0:30,0:30:90.31:0,90,1730	1/1:1,19:20:51.17:778,51,0	1/1:3,17:20:48.16:732,48,0	0/0:22,0:22:66.23:0,66,1260	0/0:14,0:14:42.14:0,42,803	1/1:2,16:18:39.13:583,39,0	0/0:22,0:22:66.23:0,66,1275	1/1:4,8:12:24.05:324,24,0	1/1:1,24:25:69.23:1053,69,0	1/1:8,6:14:9.50:137,10,0	1/1:2,19:21:57.19:869,57,0	1/1:1,16:17:48.16:731,48,0	1/1:2,15:17:26.68:411,27,0	1/1:5,30:35:81.28:1236,81,0	1/1:4,24:28:69.19:1028,69,0	1/1:2,30:32:87.30:1323,87,0	1/1:2,9:11:18.06:275,18,0
chr10	16539763	.	C	CA	9203.11	PASS	AB=0.743;AC=42;AF=0.750;AN=56;BaseQRankSum=5.990;DP=579;FS=3.026;HRun=10;HaplotypeScore=95.6175;InbreedingCoeff=0.6294;MQ=69.53;MQ0=0;MQRankSum=-2.711;QD=19.71;ReadPosRankSum=0.065;VQSLOD=5.1928;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,2:24:24.87:0,25,404	1/1:1,5:6:14.95:145,15,0	0/0:16,0:16:13.14:0,13,92	0/1:10,0:11:4.67:5,0,79	1/1:3,28:31:75.18:793,75,0	1/1:6,13:19:11.45:327,11,0	1/1:0,7:8:20.89:206,21,0	1/1:2,21:24:59.87:564,60,0	1/1:2,13:15:8.44:295,8,0	1/1:4,18:22:51.27:522,51,0	1/1:2,20:22:54.96:563,55,0	0/0:18,0:18:41.87:0,42,336	0/1:5,13:18:10.18:310,0,10	1/1:6,16:22:14.45:359,14,0	0/0:26,0:26:65.81:0,66,529	0/0:27,0:27:65.86:0,66,539	1/1:4,16:20:20.48:423,20,0	0/1:6,1:7:11.01:11,0,127	1/1:6,9:17:11.09:282,11,0	1/1:6,24:33:58.92:730,59,0	1/1:3,13:16:11.55:327,12,0	1/1:6,17:24:37.60:358,38,0	1/1:3,22:26:13.66:528,14,0	1/1:0,10:10:27.07:288,27,0	1/1:3,29:32:50.54:743,51,0	1/1:5,23:28:44.50:663,44,0	1/1:8,35:44:63.82:645,64,0	0/1:4,8:12:9.60:113,0,10
chr10	16540511	.	CA	C	5200.19	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=14.322;DP=723;FS=3.676;HRun=9;HaplotypeScore=145.1201;InbreedingCoeff=0.9521;MQ=64.89;MQ0=5;MQRankSum=-3.633;QD=9.81;ReadPosRankSum=1.654;VQSLOD=2.7203;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:72.20:0,72,819	1/1:12,0:12:23.66:115,24,0	0/0:23,0:16:15.37:0,15,200	0/0:24,0:13:4.27:0,4,64	1/1:28,0:28:37.44:214,37,0	1/1:20,0:20:38.42:207,38,0	1/1:9,0:9:19.78:101,20,0	1/1:32,0:32:61.90:355,62,0	1/1:25,0:25:13.49:189,13,0	1/1:34,1:35:75.46:423,75,0	1/1:38,0:38:44.84:336,45,0	0/0:30,0:30:81.21:0,81,907	1/1:20,1:21:28.42:160,28,0	1/1:18,0:18:40.35:219,40,0	0/0:31,0:31:90.26:0,90,1030	0/0:29,0:29:66.18:0,66,752	1/1:28,1:30:44.69:264,45,0	0/0:25,1:26:53.27:0,53,753	1/1:21,2:21:17.88:249,18,0	1/1:42,0:42:77.19:472,77,0	1/1:20,2:22:13.77:204,14,0	1/1:19,0:19:32.90:178,33,0	1/1:19,0:19:33.45:181,33,0	1/1:27,1:28:47.86:251,48,0	1/1:31,0:30:51.57:258,52,0	1/1:35,0:35:90.01:519,90,0	1/1:36,0:36:26.25:253,26,0	1/1:7,0:6:10.52:52,11,0
chr10	16540517	.	A	AAAC	12029.03	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=13.665;DP=732;FS=1.088;HRun=0;HaplotypeScore=144.9980;InbreedingCoeff=0.9827;MQ=64.32;MQ0=5;MQRankSum=-2.708;QD=22.15;ReadPosRankSum=3.142;VQSLOD=4.8764;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:78.20:0,78,1172	1/1:12,0:12:26.97:294,27,0	0/0:26,0:16:15.93:0,16,278	0/0:24,0:12:12.77:0,13,167	1/1:29,0:29:47.99:530,48,0	1/1:19,0:19:44.89:505,45,0	1/1:12,0:12:21.06:255,21,0	1/1:39,0:39:82.83:747,83,0	1/1:27,1:28:39.76:587,40,0	1/1:35,0:35:93.41:956,93,0	1/1:36,0:36:50.57:751,51,0	0/0:27,0:27:81.24:0,81,1227	1/1:20,0:20:30.07:350,30,0	1/1:20,0:20:42.13:519,42,0	0/0:32,0:32:96.30:0,96,1444	0/0:24,0:24:69.21:0,69,1034	1/1:32,0:32:52:602,52,0	0/0:27,0:27:53.53:0,54,1063	1/1:25,0:23:34.80:486,35,0	1/1:37,0:37:53.68:888,54,0	1/1:22,0:22:15.75:533,16,0	1/1:18,2:20:21.74:401,22,0	1/1:19,0:19:24.71:407,25,0	1/1:28,0:28:50.87:620,51,0	1/1:29,0:28:57.12:642,57,0	1/1:36,1:37:99:1150,102,0	1/1:35,0:35:36.67:664,37,0	1/1:9,0:8:12.03:140,12,0
chr10	16540518	.	A	AAC	17746.85	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=13.077;DP=749;FS=2.953;HRun=0;HaplotypeScore=115.4646;InbreedingCoeff=0.9653;MQ=64.44;MQ0=5;MQRankSum=-2.812;QD=31.86;ReadPosRankSum=2.485;VQSLOD=7.0179;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:81.19:0,81,1091	1/1:0,13:13:27.01:460,27,0	0/0:27,0:17:22.55:0,23,241	0/0:25,0:12:4.14:0,4,159	1/1:2,26:30:54.58:838,55,0	1/1:4,15:19:44.62:686,45,0	1/1:1,12:13:20.81:367,21,0	1/1:8,35:43:91.09:1254,91,0	1/1:2,26:28:48.63:814,49,0	1/1:2,33:35:92.95:1412,93,0	1/1:2,32:35:49.46:1150,49,0	0/0:27,0:27:81.24:0,81,1119	1/1:1,19:20:30.10:497,30,0	1/1:1,20:21:41.82:733,42,0	0/0:33,0:33:96.30:0,96,1330	0/0:24,0:24:69.22:0,69,957	1/1:4,29:34:39.54:842,40,0	0/0:27,0:27:74.81:0,75,1008	1/1:6,18:22:50.48:676,50,0	1/1:2,36:39:66.85:1390,67,0	1/1:4,19:23:35.27:768,35,0	1/1:3,17:20:23.07:489,23,0	1/1:2,17:19:36.91:607,37,0	1/1:3,27:31:30.83:865,31,0	1/1:3,24:26:57.19:980,57,0	1/1:2,34:37:99:1669,108,0	1/1:2,32:35:54.94:1043,55,0	1/1:2,9:10:12.04:207,12,0
chr10	16541059	.	CATATATATATAT	C	6376.68	PASS	AC=30;AF=0.789;AN=38;BaseQRankSum=-0.262;DP=302;FS=6.329;HRun=0;HaplotypeScore=142.4761;InbreedingCoeff=0.6102;MQ=45.80;MQ0=1;MQRankSum=-2.482;QD=27.97;ReadPosRankSum=-1.016;VQSLOD=3.3510;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:0,0:5:6.02:0,6,298	1/1:2,3:5:9.03:264,9,0	./.	./.	./.	1/1:9,14:23:12.04:428,12,0	1/1:1,4:4:3.01:107,3,0	1/1:14,25:38:72.02:1135,72,0	1/1:2,3:5:3.01:105,3,0	1/1:14,6:20:39.13:1019,39,0	1/1:7,5:12:9.03:201,9,0	./.	1/1:6,7:13:12.04:418,12,0	./.	0/0:3,0:3:3:0,3,25	0/0:2,0:3:3.01:0,3,158	1/1:13,8:22:5.79:206,6,0	0/0:7,0:19:24.08:0,24,1020	1/1:7,3:10:12.04:377,12,0	1/1:4,8:13:6.02:170,6,0	./.	./.	./.	./.	1/1:7,9:16:6.02:163,6,0	1/1:11,4:15:27.09:719,27,0	1/1:13,12:24:27.02:824,27,0	1/1:3,2:5:9.03:241,9,0
chr10	16541155	.	G	GA	13276.68	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=-10.052;DP=454;FS=10.430;HRun=4;HaplotypeScore=41.6604;InbreedingCoeff=0.9884;MQ=76.31;MQ0=0;MQRankSum=-3.342;QD=37.09;ReadPosRankSum=0.867;VQSLOD=4.2304;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:48.07:0,48,519	1/1:1,8:9:24.08:328,24,0	0/0:15,0:16:45.10:0,45,488	0/0:7,0:7:21.03:0,21,224	1/1:0,18:18:51.08:655,51,0	1/1:1,22:23:63.21:861,63,0	1/1:0,16:16:45.15:615,45,0	1/1:5,28:33:84.25:1103,84,0	1/1:0,9:9:27.09:366,27,0	1/1:1,24:25:72.22:967,72,0	1/1:1,22:23:66.22:901,66,0	0/0:7,0:7:21.06:0,21,238	1/1:1,15:16:45.15:615,45,0	1/1:1,12:13:36.12:492,36,0	0/0:9,0:9:27.08:0,27,306	0/0:15,0:15:45.13:0,45,510	1/1:0,30:30:81.27:1107,81,0	0/0:23,0:23:57.15:0,57,636	1/1:0,12:12:36.11:476,36,0	1/1:1,19:20:51.17:697,51,0	1/1:0,12:12:30.06:389,30,0	1/1:0,4:4:12.04:164,12,0	1/1:1,6:7:18.05:232,18,0	1/1:0,6:6:18.06:246,18,0	1/1:1,15:16:42.14:574,42,0	1/1:1,24:25:72.19:949,72,0	1/1:0,33:31:93.27:1250,93,0	1/1:1,7:8:21.07:287,21,0
chr10	16543067	.	C	CG	865.35	PASS	AB=0.778;AC=15;AF=0.268;AN=56;BaseQRankSum=1.728;DP=383;FS=4.069;HRun=9;HaplotypeScore=71.0321;InbreedingCoeff=0.6387;MQ=81.70;MQ0=2;MQRankSum=-2.438;QD=9.72;ReadPosRankSum=-0.730;VQSLOD=2.2871;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:26.93:0,27,229	1/1:1,1:2:3.01:33,3,0	0/0:21,0:17:25.37:0,25,261	0/0:22,0:20:6.55:0,7,151	0/1:8,0:8:2.40:58,0,2	0/0:11,0:11:18.46:0,18,157	0/0:24,3:27:26.39:0,26,443	0/1:7,4:11:40.16:42,0,40	0/0:13,0:13:27.07:0,27,255	1/1:4,2:6:9.49:93,9,0	1/1:1,4:5:3.01:33,3,0	0/0:17,0:17:40.99:0,41,333	0/0:21,0:21:32.03:0,32,401	0/0:18,0:18:44.65:0,45,364	0/0:13,0:13:29.96:0,30,257	0/0:14,0:14:26.68:0,27,258	1/1:4,25:29:48.13:531,48,0	0/0:22,1:23:20.74:0,21,398	0/0:8,0:8:20.03:0,20,161	0/0:7,0:7:11.99:0,12,104	0/0:13,0:13:32.98:0,33,286	0/0:11,0:11:26.97:0,27,230	0/0:12,0:12:17.84:0,18,156	0/0:17,0:17:47.77:0,48,412	0/0:9,0:9:23.99:0,24,208	1/1:8,4:12:6.01:66,6,0	1/1:3,10:12:14.91:166,15,0	0/1:1,2:3:16.51:17,0,20
chr10	16543267	.	TGTGAGAGAGTGAGAGA	T	2638.79	PASS	AC=20;AF=0.476;AN=42;BaseQRankSum=3.566;DP=673;FS=10.062;HRun=0;HaplotypeScore=292.5574;InbreedingCoeff=0.7737;MQ=76.12;MQ0=3;MQRankSum=-5.515;QD=12.33;ReadPosRankSum=0.086;VQSLOD=0.6715;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:39.13:0,39,2594	0/0:4,0:6:6.02:0,6,132	./.	./.	0/0:26,0:29:9.01:0,9,261	1/1:17,4:21:12.04:481,12,0	./.	./.	1/1:20,3:23:6.02:258,6,0	0/0:13,0:14:9.03:0,9,174	./.	0/0:29,0:29:36.12:0,36,1835	1/1:18,7:25:12.04:408,12,0	1/1:16,6:22:12.04:516,12,0	0/0:24,0:24:24.08:0,24,1641	0/0:22,0:22:27.09:0,27,1733	0/0:21,0:27:18.06:0,18,367	0/0:29,0:29:36.12:0,36,2345	1/1:25,2:26:6:153,6,0	1/1:17,3:20:3.01:129,3,0	./.	1/1:15,3:18:3.01:129,3,0	1/1:16,2:18:9.03:387,9,0	1/1:26,4:30:3.01:129,3,0	1/1:10,0:10:6.02:212,6,0	0/0:27,0:29:24.08:0,24,580	0/0:13,0:20:21.07:0,21,369	./.
chr10	16547049	.	TCACACA	T	1455.31	PASS	AB=0.954;AC=22;AF=0.407;AN=54;BaseQRankSum=0.586;DP=599;FS=0.679;HRun=0;HaplotypeScore=124.0884;InbreedingCoeff=0.3343;MQ=63.92;MQ0=29;MQRankSum=1.478;QD=4.55;ReadPosRankSum=1.650;VQSLOD=2.4638;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:32:29.62:0,30,451	0/0:7,0:7:2.45:0,2,22	./.	0/0:33,0:21:2.99:0,3,23	0/1:23,0:22:7.70:8,0,54	1/1:17,0:13:8.94:120,9,0	1/1:22,1:23:8.68:251,9,0	0/1:18,0:17:33.16:145,0,33	0/1:19,0:19:7.45:190,0,7	0/1:21,0:18:4.69:5,0,166	0/0:15,0:15:2.37:0,2,8	0/0:19,0:18:21.04:0,21,286	1/1:10,0:10:9.02:141,9,0	1/1:11,11:22:2.80:13,3,0	0/0:15,0:13:24.06:0,24,463	0/0:22,0:21:27.02:0,27,384	0/0:23,0:22:20.98:0,21,156	0/0:19,0:20:11.85:0,12,471	1/1:11,0:10:10.79:214,11,0	1/1:9,8:17:0.47:1,0,0	0/1:54,0:52:6.30:128,0,6	0/1:17,0:16:14.01:14,0,15	1/1:16,0:17:14.56:228,15,0	0/1:34,1:31:1.48:161,0,1	0/1:9,6:15:0.01:0,0,0	0/0:30,0:30:27.49:0,27,250	0/0:17,0:17:4.71:0,5,28	0/0:12,0:11:8.94:0,9,65
chr10	16547082	.	C	CAT	966.43	PASS	AB=0.958;AC=12;AF=0.222;AN=54;BaseQRankSum=-0.361;DP=683;FS=10.572;HRun=0;HaplotypeScore=109.4617;InbreedingCoeff=-0.0722;MQ=44.18;MQ0=99;MQRankSum=4.242;QD=2.94;ReadPosRankSum=1.496;VQSLOD=1.6899;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:42:55.86:0,56,621	0/0:2,0:2:3.46:0,3,24	./.	0/0:8,0:1:2.99:0,3,23	0/1:29,0:24:7.71:8,0,54	0/1:14,1:11:31.06:80,0,31	1/1:24,2:20:8.34:216,8,0	0/1:29,2:27:99:109,0,277	0/1:21,0:19:80.39:142,0,80	0/0:38,0:25:23.65:0,24,357	0/0:15,0:14:2.37:0,2,8	0/0:18,0:15:28.97:0,29,336	0/1:19,0:15:66.26:66,0,135	0/0:22,0:21:8.17:0,8,56	0/0:19,0:14:26.90:0,27,367	0/0:30,0:28:53.61:0,54,516	0/0:29,0:25:6.08:0,6,84	0/0:24,0:22:32.44:0,32,471	0/1:20,0:17:97.67:107,0,98	0/0:13,0:12:2.91:0,3,18	0/1:54,24:71:59.15:59,0,137	0/1:23,0:19:14.01:14,0,15	0/1:19,0:16:9.45:171,0,9	0/1:42,2:36:1.67:139,0,2	0/0:19,0:18:11.92:0,12,94	0/0:32,0:28:67.11:0,67,478	0/0:18,0:17:34.21:0,34,234	0/0:15,0:13:8.02:0,8,62
chr10	16547084	.	CACACAT	C	2040.78	PASS	AB=0.977;AC=34;AF=0.680;AN=50;BaseQRankSum=7.903;DP=678;FS=5.700;HRun=0;HaplotypeScore=125.3066;InbreedingCoeff=-0.1919;MQ=43.79;MQ0=99;MQRankSum=4.220;QD=3.32;ReadPosRankSum=-2.423;VQSLOD=1.4275;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:48,0:42:70.10:70,0,250	1/1:2,0:2:2.96:19,3,0	./.	./.	1/1:29,0:24:4.83:47,5,0	1/1:15,0:11:6.98:123,7,0	1/1:26,0:20:10.87:141,11,0	0/1:31,0:27:29.08:29,0,254	0/1:20,0:18:24.40:132,0,24	0/1:39,0:26:76.10:93,0,76	./.	0/1:19,0:16:4.61:5,0,156	1/1:19,0:15:27.80:251,28,0	0/1:23,0:22:0.95:40,0,1	0/0:17,0:13:13.79:0,14,341	0/1:26,0:24:67.91:68,0,304	0/1:30,0:26:5.61:30,0,6	0/1:26,0:24:14.78:15,0,403	0/1:13,8:18:70.60:228,0,71	1/1:12,0:11:2.84:14,3,0	1/1:81,0:69:5.05:224,5,0	0/0:12,10:18:0.82:0,1,3	0/1:19,0:16:51.02:106,0,51	1/1:45,0:37:9.03:104,9,0	1/1:19,0:18:4.97:72,5,0	0/1:32,0:28:65.13:167,0,65	1/1:18,0:17:24.52:201,25,0	1/1:15,0:13:0.98:3,1,0
chr10	16547086	.	CACAT	C	1784.12	PASS	AB=0.970;AC=33;AF=0.660;AN=50;BaseQRankSum=8.246;DP=666;FS=5.616;HRun=0;HaplotypeScore=121.3954;InbreedingCoeff=-0.1456;MQ=43.67;MQ0=98;MQRankSum=3.418;QD=3.09;ReadPosRankSum=-2.729;VQSLOD=1.5703;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:48,0:42:63.09:63,0,265	1/1:2,0:2:5.96:45,6,0	./.	./.	1/1:28,0:23:4.77:24,5,0	1/1:14,0:11:0.99:86,1,0	1/1:28,0:22:5.18:29,5,0	0/0:31,0:27:14.99:0,15,276	0/1:22,0:20:49.95:63,0,50	0/1:41,0:28:95:95,0,96	./.	0/1:18,0:15:4.86:5,0,180	1/1:18,0:14:27.75:209,28,0	0/1:23,0:22:7.37:39,0,7	0/0:17,0:13:12.05:0,12,415	0/1:25,0:23:68.44:68,0,270	1/1:27,2:25:2.76:228,3,0	0/1:25,0:23:30.04:30,0,365	0/1:21,0:18:71.32:105,0,71	1/1:12,0:11:2.84:14,3,0	0/1:81,0:69:18.77:165,0,19	0/0:22,0:18:2.09:0,2,10	0/1:17,0:14:29.62:36,0,30	1/1:44,0:36:2.76:7,3,0	1/1:19,0:18:5.08:72,5,0	0/1:15,15:26:61.40:262,0,61	1/1:17,0:16:26.60:221,27,0	1/1:4,11:13:5.97:65,6,0
chr10	16547088	.	CAT	C	1578.78	PASS	AB=0.995;AC=31;AF=0.620;AN=50;BaseQRankSum=8.124;DP=667;FS=2.207;HRun=0;HaplotypeScore=112.7844;InbreedingCoeff=-0.3289;MQ=43.51;MQ0=98;MQRankSum=4.881;QD=2.62;ReadPosRankSum=-2.019;VQSLOD=2.0640;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:52,0:45:75.66:76,0,265	1/1:2,0:2:5.95:44,6,0	./.	./.	1/1:27,0:22:4.77:23,5,0	0/1:15,0:12:7.93:80,0,8	0/1:26,1:21:8.70:37,0,9	0/0:32,0:28:7.55:0,8,327	0/1:21,0:19:59.40:68,0,59	0/1:40,0:27:58.28:58,0,141	./.	0/1:18,0:15:11.82:12,0,165	1/1:18,0:14:20.42:198,20,0	0/1:23,0:22:7.97:39,0,8	0/0:17,0:13:12.07:0,12,363	0/1:26,0:24:66.21:66,0,235	0/1:28,1:25:10.62:79,0,11	0/1:24,0:22:49.56:50,0,290	0/1:22,0:18:78.29:78,0,100	1/1:11,1:11:2.84:14,3,0	0/1:80,0:69:34.82:152,0,35	1/1:22,0:18:2.80:13,3,0	0/1:17,0:14:8.83:58,0,9	0/1:44,0:36:7.89:8,0,8	1/1:20,0:19:5.01:72,5,0	0/1:29,0:25:89.44:229,0,89	1/1:18,0:17:30.52:241,31,0	1/1:15,0:13:4.40:30,4,0
chr10	16547094	.	CACAT	C	1455.59	PASS	AB=1.000;AC=33;AF=0.660;AN=50;BaseQRankSum=8.477;DP=654;FS=0.511;HRun=0;HaplotypeScore=129.6676;InbreedingCoeff=0.1354;MQ=43.40;MQ0=96;MQRankSum=4.910;QD=2.63;ReadPosRankSum=-0.346;VQSLOD=2.4888;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:49,0:42:99:100,0,183	1/1:3,0:3:6.41:44,6,0	./.	./.	1/1:26,0:21:2.99:23,3,0	1/1:15,1:13:13.28:100,13,0	1/1:27,1:21:7.36:41,7,0	0/0:25,0:22:60.83:0,61,387	1/1:21,0:19:8.19:105,8,0	0/1:38,0:25:21.51:22,0,87	./.	0/1:21,0:18:8.45:8,0,103	1/1:22,0:18:31.06:216,31,0	1/1:23,0:21:11.81:96,12,0	0/0:19,0:14:15.70:0,16,147	0/1:23,0:21:3.85:4,0,303	0/1:30,0:26:0.26:0,0,20	0/0:27,0:25:0.99:0,1,296	0/1:20,0:16:86.84:87,0,89	1/1:11,0:10:2.84:14,3,0	1/1:78,1:69:25.20:247,25,0	0/1:20,0:16:0:1,0,0	0/1:16,0:13:45.98:46,0,60	1/1:43,1:36:3.56:25,4,0	1/1:19,0:18:5.08:72,5,0	0/1:27,0:23:71.09:157,0,71	1/1:17,0:16:23.55:195,24,0	0/0:16,0:14:0.47:0,0,2
chr10	16547096	.	CAT	C	1698.67	PASS	AB=0.963;AC=34;AF=0.680;AN=50;BaseQRankSum=9.204;DP=649;FS=1.061;HRun=0;HaplotypeScore=117.4547;InbreedingCoeff=0.0474;MQ=43.36;MQ0=97;MQRankSum=5.662;QD=2.95;ReadPosRankSum=-0.674;VQSLOD=2.3264;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:48,0:41:99:135,0,164	1/1:3,0:3:8.94:68,9,0	./.	./.	1/1:17,9:21:2.99:23,3,0	1/1:16,0:13:13.52:100,14,0	1/1:27,0:20:9.15:54,9,0	0/0:25,0:22:61.77:0,62,394	1/1:20,0:18:7.91:121,8,0	0/1:38,0:25:35.18:35,0,89	./.	0/1:20,0:17:8.67:9,0,109	1/1:22,0:18:31.07:219,31,0	1/1:23,0:21:11.97:96,12,0	0/0:19,0:14:15.70:0,16,147	0/1:23,0:21:1.78:2,0,206	0/1:12,18:26:17.22:21,0,17	0/1:28,0:26:37.89:38,0,235	0/1:21,0:17:87.28:87,0,97	1/1:10,0:9:3.31:16,3,0	1/1:79,0:69:33.74:313,34,0	0/1:21,0:16:0:0,0,0	0/1:15,0:12:36.39:66,0,36	1/1:17,26:35:4.54:26,5,0	1/1:19,0:18:5.98:74,6,0	0/1:26,0:22:74.29:156,0,74	1/1:17,0:16:22.64:191,23,0	0/0:16,0:14:0.47:0,0,1
chr10	16547098	.	TACACACACACACACAC	T	3646.45	PASS	AB=0.971;AC=31;AF=0.620;AN=50;BaseQRankSum=-1.500;DP=645;FS=23.050;HRun=0;HaplotypeScore=190.1203;InbreedingCoeff=0.3612;MQ=43.36;MQ0=96;MQRankSum=2.225;QD=7.76;ReadPosRankSum=-2.892;VQSLOD=0.6613;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:39:43.73:0,44,905	1/1:3,0:3:5.38:86,5,0	./.	./.	1/1:26,0:21:3.01:36,3,0	1/1:15,0:13:8.53:229,9,0	1/1:26,0:19:4.56:135,5,0	0/0:24,0:21:0:0,0,0	1/1:21,0:19:8.85:135,9,0	0/1:26,9:22:1.25:242,0,1	0/1:13,0:12:0:0,0,0	0/0:19,0:16:20.97:0,21,407	1/1:23,0:19:29.88:488,30,0	1/1:22,0:20:8.84:231,9,0	0/0:19,0:14:6.49:0,6,90	0/0:23,0:21:39.12:0,39,1139	1/1:31,0:27:8.04:166,8,0	0/0:28,0:26:52.98:0,53,1262	1/1:19,0:15:10.17:241,10,0	0/1:9,0:8:43.46:43,0,79	1/1:82,0:71:16.70:714,17,0	0/1:21,0:16:0.42:1,0,0	0/1:15,0:12:23.59:24,0,140	1/1:44,0:36:3.01:70,3,0	0/1:20,0:19:44.13:271,0,44	0/1:27,0:23:99:167,0,177	1/1:18,0:16:20.76:366,21,0	./.
chr10	16548212	.	TACACACACACAC	T	4169.10	PASS	AB=0.793;AC=32;AF=0.615;AN=52;BaseQRankSum=7.981;DP=554;FS=4.825;HRun=0;HaplotypeScore=177.2072;InbreedingCoeff=0.3209;MQ=53.80;MQ0=10;MQRankSum=-7.419;QD=11.74;ReadPosRankSum=-3.509;VQSLOD=1.8672;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:32:43.03:0,43,2031	0/1:5,0:6:16.90:38,0,17	./.	0/0:24,0:9:3.01:0,3,45	0/1:8,0:10:19.74:20,0,37	1/1:7,11:19:21.07:666,21,0	1/1:18,0:18:2.31:44,2,0	1/1:26,0:25:6.01:80,6,0	1/1:13,8:22:15.05:459,15,0	0/1:24,0:26:59.49:154,0,59	0/1:10,0:17:54.61:155,0,55	0/0:26,0:26:39.13:0,39,1822	1/1:11,0:11:6.01:92,6,0	1/1:13,10:23:3:103,3,0	0/0:23,0:23:33.10:0,33,1310	0/0:20,0:20:27.03:0,27,1129	0/1:17,0:24:99:154,0,194	0/0:16,0:17:30.10:0,30,1209	./.	1/1:14,3:17:9.03:299,9,0	1/1:21,0:21:2.87:23,3,0	1/1:12,11:25:21.96:681,22,0	1/1:10,1:12:3.01:103,3,0	1/1:12,5:17:6.02:206,6,0	1/1:12,7:19:12.04:412,12,0	0/0:21,0:21:11.99:0,12,118	1/1:14,1:17:13.29:240,13,0	0/1:13,0:22:57.27:240,0,57
chr10	16550362	.	AAG	A	276.81	PASS	AB=0.968;AC=21;AF=0.375;AN=56;BaseQRankSum=3.911;DP=328;FS=2.957;HRun=0;HaplotypeScore=62.2811;InbreedingCoeff=-0.2657;MQ=56.98;MQ0=14;MQRankSum=-2.484;QD=1.34;ReadPosRankSum=4.222;VQSLOD=1.2185;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:52.57:0,53,525	0/1:6,0:5:7.90:8,0,18	0/1:12,0:6:16.18:16,0,101	0/1:9,0:4:0.04:1,0,0	0/1:15,1:15:4.46:23,0,4	0/1:8,0:6:11.16:11,0,25	0/1:19,1:19:30.28:38,0,30	0/0:15,0:12:18.60:0,19,133	0/1:11,2:12:62.11:62,0,72	0/1:10,0:10:1.78:2,0,63	0/1:11,2:13:20.80:35,0,21	0/0:12,0:11:23.16:0,23,216	1/1:5,0:5:2.80:13,3,0	0/0:9,0:7:2.66:0,3,64	0/0:13,0:13:21.48:0,21,274	0/0:7,0:7:9.33:0,9,112	0/1:16,0:16:9.05:9,0,113	0/0:14,0:14:13.99:0,14,178	0/1:15,1:15:32.83:33,0,69	0/1:17,0:15:44.52:45,0,48	0/1:4,0:4:33.55:34,0,37	1/1:6,1:6:6.29:51,6,0	0/1:6,0:5:7.41:7,0,20	0/1:12,0:10:16.50:16,0,75	0/0:7,0:6:6.14:0,6,49	0/0:16,1:17:1.98:0,2,98	0/1:7,1:8:15.35:15,0,16	0/1:9,0:7:7.61:8,0,19
chr10	16550414	.	G	GC	1959.42	PASS	AB=1.000;AC=40;AF=0.714;AN=56;BaseQRankSum=-1.018;DP=221;FS=0.000;HRun=0;HaplotypeScore=45.5028;InbreedingCoeff=0.6350;MQ=81.59;MQ0=1;MQRankSum=-0.871;QD=11.88;ReadPosRankSum=1.355;VQSLOD=3.4146;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:20.70:0,21,143	0/1:4,0:5:0.73:12,0,1	0/0:12,0:12:29.64:0,30,277	0/1:9,0:7:12.22:12,0,45	1/1:10,0:10:17.87:106,18,0	1/1:5,1:5:8.66:58,9,0	1/1:15,2:17:6.08:183,6,0	1/1:9,0:9:14.75:106,15,0	1/1:8,2:10:15.31:154,15,0	1/1:4,0:4:2.50:39,2,0	1/1:1,0:1:2.22:7,2,0	0/0:7,0:7:9.31:0,9,65	1/1:6,0:6:14.77:103,15,0	0/0:2,4:6:1.25:0,1,3	0/0:6,0:6:15.46:0,15,127	0/0:5,0:5:11.86:0,12,85	1/1:20,0:20:53.14:275,53,0	0/0:10,0:10:23.87:0,24,192	1/1:2,9:11:24:225,24,0	1/1:0,0:1:2.99:23,3,0	1/1:6,0:6:5.94:43,6,0	1/1:8,0:8:9.85:73,10,0	1/1:0,1:1:3.01:38,3,0	1/1:13,1:13:29.44:314,29,0	1/1:4,0:4:8.57:55,9,0	1/1:10,1:11:18.21:146,18,0	1/1:9,0:9:20.28:116,20,0	1/1:3,0:3:8.78:52,9,0
chr10	16552186	.	TTCTCTGTTTCATGATTGGA	T	20566.84	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=14.142;DP=597;FS=0.428;HRun=0;HaplotypeScore=304.1635;InbreedingCoeff=0.8652;MQ=66.19;MQ0=0;MQRankSum=-12.564;QD=53.01;ReadPosRankSum=2.788;VQSLOD=3.4338;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,110,8481	1/1:2,6:8:18.02:790,18,0	0/0:28,0:28:42.14:0,42,2778	0/0:24,0:23:45.15:0,45,2411	1/1:4,10:14:24.05:942,24,0	1/1:8,9:17:27.09:1385,27,0	1/1:12,8:20:18.06:924,18,0	1/1:24,0:24:3:28,3,0	1/1:10,10:19:21.07:1078,21,0	1/1:4,13:17:39.13:1632,39,0	1/1:9,2:11:3.01:154,3,0	0/0:19,0:19:39.13:0,39,3238	1/1:8,7:15:18.06:924,18,0	1/1:10,9:19:18.06:924,18,0	0/0:34,0:34:69.24:0,69,5529	0/0:25,0:25:57.18:0,57,4542	1/1:10,11:21:21.07:1078,21,0	0/0:28,0:28:60.16:0,60,4348	1/1:13,5:18:15.05:561,15,0	1/1:8,10:18:30.10:1356,30,0	1/1:20,0:20:1.25:47,1,0	1/1:3,11:14:19.31:1014,19,0	1/1:4,12:16:29.80:1372,30,0	1/1:19,12:31:6.02:308,6,0	1/1:5,6:11:12.04:616,12,0	1/1:14,15:29:44.98:2063,45,0	1/1:12,19:31:51.17:2604,51,0	1/1:8,6:14:15.05:770,15,0
chr10	16552399	.	T	TG	1644.38	PASS	AB=0.749;AC=18;AF=0.321;AN=56;BaseQRankSum=-0.644;DP=533;FS=3.765;HRun=10;HaplotypeScore=68.1799;InbreedingCoeff=0.2058;MQ=74.45;MQ0=1;MQRankSum=0.611;QD=6.37;ReadPosRankSum=-2.066;VQSLOD=1.2875;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:52.77:0,53,563	0/0:7,0:7:11.98:0,12,98	0/1:16,0:15:7.11:7,0,26	0/0:10,0:8:14.89:0,15,112	0/0:9,0:9:14.18:0,14,105	0/1:10,4:14:29.67:104,0,30	0/1:13,15:28:10.19:313,0,10	0/1:21,4:25:12.17:12,0,108	0/1:11,9:20:99:126,0,108	0/0:23,0:23:20.91:0,21,172	0/0:6,0:7:14.62:0,15,89	0/0:24,0:24:53.89:0,54,442	0/1:11,3:14:0.60:190,0,1	0/1:6,12:18:96.02:100,0,96	0/0:31,0:32:69.17:0,69,545	0/0:16,0:19:52.02:0,52,405	0/0:29,1:33:51.10:0,51,581	0/0:21,0:24:45.95:0,46,351	0/1:9,1:10:20.48:42,0,20	1/1:6,3:9:8.99:85,9,0	1/1:6,19:25:18.05:192,18,0	1/1:17,0:17:29.56:214,30,0	1/1:3,6:10:5.65:91,6,0	0/1:10,21:32:56.19:261,0,56	0/1:6,14:20:12.55:84,0,13	0/0:12,0:13:10.95:0,11,77	0/0:24,0:28:53.99:0,54,410	0/0:9,0:9:12.90:0,13,87
chr10	16552401	.	G	GC	337.93	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=7.603;DP=517;FS=16.674;HRun=0;HaplotypeScore=70.8668;InbreedingCoeff=0.1291;MQ=72.55;MQ0=1;MQRankSum=1.027;QD=2.66;ReadPosRankSum=3.436;VQSLOD=1.1497;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,113,1318	0/0:6,0:6:15.04:0,15,193	0/0:12,0:12:2.70:0,3,103	0/0:10,0:8:21.05:0,21,262	0/0:8,0:8:18.05:0,18,225	0/0:14,0:14:5.05:0,5,143	0/1:24,0:24:11.08:11,0,209	0/0:25,0:25:61.11:0,61,622	0/0:19,0:19:8.49:0,8,273	0/0:22,0:22:54.07:0,54,572	0/0:7,0:7:18.44:0,18,195	0/0:25,0:25:72.18:0,72,911	0/1:12,0:12:20.30:20,0,88	0/1:18,0:18:0.36:0,0,202	0/0:32,0:32:94.44:0,94,1157	0/0:19,0:19:54.09:0,54,708	0/0:31,0:31:81.71:0,82,1112	0/0:22,0:22:60.03:0,60,715	0/0:9,0:9:15.23:0,15,154	0/0:8,0:8:4.57:0,5,92	0/1:25,0:25:10.12:10,0,54	1/1:2,13:16:30.08:405,30,0	0/0:10,0:10:1.81:0,2,73	0/1:32,0:32:15.43:15,0,172	0/0:21,0:21:8.41:0,8,146	0/0:14,0:14:32.94:0,33,319	0/0:26,0:26:74.97:0,75,860	0/0:10,0:10:21.03:0,21,238
chr10	16553930	.	CT	C	6655.78	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=7.481;DP=438;FS=0.458;HRun=10;HaplotypeScore=46.4061;InbreedingCoeff=0.9125;MQ=72.59;MQ0=0;MQRankSum=-0.107;QD=20.35;ReadPosRankSum=0.708;VQSLOD=5.4991;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,1:26:40.11:0,40,662	1/1:2,6:8:17.99:156,18,0	0/0:17,0:14:6.17:0,6,82	0/0:11,0:9:6.86:0,7,109	1/1:2,14:16:32.95:280,33,0	1/1:3,14:17:38.99:339,39,0	1/1:1,14:16:44.03:371,44,0	1/1:2,16:18:47.95:407,48,0	1/1:3,9:12:18:156,18,0	1/1:8,15:23:44.98:391,45,0	1/1:1,13:14:5.71:270,6,0	0/0:17,1:18:25.07:0,25,496	1/1:2,4:6:8.83:78,9,0	1/1:3,13:16:41.99:364,42,0	0/0:11,0:11:30.08:0,30,332	0/0:11,0:11:24.05:0,24,257	1/1:8,24:32:59.96:521,60,0	0/0:17,0:17:51.14:0,51,563	1/1:3,11:14:17.17:268,17,0	1/1:3,13:16:35.97:313,36,0	1/1:1,3:6:13.07:90,13,0	1/1:0,7:7:17.99:156,18,0	1/1:2,17:19:44.99:390,45,0	1/1:0,3:3:9:78,9,0	1/1:2,11:13:35.99:312,36,0	1/1:4,20:24:65.97:570,66,0	1/1:1,29:30:86.98:755,87,0	1/1:1,16:17:44.99:391,45,0
chr10	16554204	.	T	TC	5460.96	PASS	AB=0.571;AC=41;AF=0.732;AN=56;BaseQRankSum=-3.975;DP=496;FS=6.474;HRun=9;HaplotypeScore=62.2708;InbreedingCoeff=0.8056;MQ=74.49;MQ0=5;MQRankSum=-0.981;QD=17.07;ReadPosRankSum=1.166;VQSLOD=4.8617;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,102,865	1/1:2,2:7:11.98:107,12,0	0/0:40,0:19:21.98:0,22,201	0/0:32,0:18:5.21:0,5,175	1/1:9,8:17:15:151,15,0	1/1:5,9:14:38.68:365,39,0	1/1:5,15:20:33.09:365,33,0	1/1:23,4:27:35.82:362,36,0	1/1:2,6:9:15:151,15,0	1/1:3,10:13:27.06:291,27,0	1/1:5,3:9:17.18:188,17,0	0/0:17,0:17:35.92:0,36,304	1/1:3,10:13:18.05:199,18,0	1/1:5,11:16:10.29:339,10,0	0/0:9,0:9:23.99:0,24,206	0/0:8,0:8:20.98:0,21,179	1/1:6,24:30:57.09:611,57,0	0/0:27,0:27:65.94:0,66,566	1/1:11,14:25:6.13:303,6,0	1/1:5,0:5:5.03:30,5,0	1/1:1,12:13:24.06:265,24,0	1/1:3,2:5:2.71:32,3,0	0/1:3,8:12:8.01:122,0,8	1/1:8,19:26:16.07:405,16,0	1/1:4,9:12:18.03:190,18,0	1/1:6,16:22:25.07:489,25,0	1/1:3,11:14:27.07:296,27,0	1/1:5,3:9:20.96:197,21,0
chr10	16558509	.	AAAT	A	103.02	PASS	AB=0.915;AC=7;AF=0.125;AN=56;BaseQRankSum=2.590;DP=398;FS=16.618;HRun=0;HaplotypeScore=83.2127;InbreedingCoeff=-0.1559;MQ=74.84;MQ0=10;MQRankSum=-3.571;QD=1.17;ReadPosRankSum=-3.590;VQSLOD=-0.5622;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:16,5:21:11.64:12,0,595	0/1:2,1:3:45.24:45,0,114	0/0:36,0:20:29.75:0,30,823	0/0:41,0:16:35.55:0,36,645	0/0:18,2:20:51:0,51,1076	0/1:17,0:16:6.97:7,0,645	0/1:14,0:14:14.16:14,0,435	0/0:7,0:7:21.04:0,21,421	0/0:10,2:11:24.08:0,24,553	0/1:9,2:11:28.02:28,0,552	0/0:10,0:10:26.29:0,26,516	0/0:11,0:11:30.06:0,30,570	0/0:13,0:13:8.29:0,8,639	0/0:10,0:10:20.86:0,21,425	0/0:11,0:11:32.97:0,33,548	0/0:7,0:7:6.02:0,6,119	0/0:16,0:15:5.28:0,5,827	0/0:18,0:18:37.89:0,38,643	0/1:7,0:7:75.24:75,0,216	0/0:9,2:11:23.11:0,23,470	0/0:8,0:8:8.93:0,9,87	0/0:10,6:16:23.76:0,24,462	0/0:8,1:9:17.86:0,18,396	0/0:17,0:17:22.37:0,22,554	0/0:13,0:13:14.10:0,14,410	0/1:15,0:14:47.11:47,0,726	0/0:18,0:18:33.04:0,33,651	0/0:5,1:5:12.03:0,12,238
chr10	16558512	.	T	TGAGAGA	3343.50	PASS	AB=0.978;AC=49;AF=0.942;AN=52;BaseQRankSum=-2.626;DP=420;FS=9.103;HRun=0;HaplotypeScore=101.5807;InbreedingCoeff=-0.0063;MQ=73.08;MQ0=11;MQRankSum=-2.022;QD=9.72;ReadPosRankSum=1.162;VQSLOD=1.6971;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:22:9.97:143,10,0	1/1:4,0:4:6.49:71,6,0	./.	./.	1/1:21,0:21:9.03:149,9,0	0/1:20,0:19:47.10:177,0,47	1/1:9,0:18:9.03:114,9,0	1/1:9,0:9:11.53:131,12,0	1/1:11,0:10:6.02:73,6,0	1/1:11,0:11:12.02:185,12,0	1/1:10,0:10:6.02:102,6,0	1/1:7,0:11:8.13:96,8,0	1/1:8,5:14:9.03:249,9,0	1/1:6,3:11:3.01:96,3,0	0/1:13,0:14:3.02:139,0,3	1/1:2,5:10:3.01:90,3,0	1/1:15,0:14:24.03:335,24,0	1/1:5,0:19:9.47:148,9,0	1/1:6,0:6:9.03:173,9,0	1/1:9,0:9:3.47:26,3,0	1/1:2,0:8:3.01:38,3,0	1/1:14,0:14:9.01:115,9,0	0/1:9,0:9:0.02:0,0,0	1/1:13,2:16:18.06:291,18,0	1/1:5,0:16:10.90:104,11,0	1/1:15,0:14:10.80:131,11,0	1/1:11,1:24:5.85:156,6,0	1/1:6,0:5:2.68:11,3,0
chr10	16560941	.	T	TGG	15743.86	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=-12.367;DP=625;FS=0.363;HRun=7;HaplotypeScore=77.0683;InbreedingCoeff=0.9981;MQ=83.96;MQ0=2;MQRankSum=-3.107;QD=34.38;ReadPosRankSum=1.757;VQSLOD=4.7249;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:90.19:0,90,1012	1/1:3,8:11:18.06:296,18,0	0/0:23,0:23:29.51:0,30,489	0/0:22,0:22:44.98:0,45,566	1/1:3,27:31:80.72:1258,81,0	1/1:5,19:25:50.43:841,50,0	1/1:3,14:17:27.09:444,27,0	1/1:5,19:25:57.11:826,57,0	1/1:0,20:20:57.19:935,57,0	1/1:10,18:28:48.14:760,48,0	1/1:4,16:20:39.13:639,39,0	0/0:22,0:22:57.13:0,57,641	1/1:1,15:16:36.12:591,36,0	1/1:3,19:24:47.65:747,48,0	0/0:28,0:28:75.20:0,75,861	0/0:22,0:22:60.17:0,60,699	1/1:6,18:24:48.16:788,48,0	0/0:13,0:13:39.07:0,39,430	1/1:1,9:10:30.06:440,30,0	1/1:3,22:25:57.15:905,57,0	1/1:7,24:31:51.17:837,51,0	1/1:2,15:19:44.37:659,44,0	1/1:1,16:18:42.12:687,42,0	1/1:3,19:25:58.66:863,59,0	1/1:0,14:14:36.12:591,36,0	1/1:6,17:23:48.13:734,48,0	1/1:4,25:30:63.21:1019,63,0	1/1:3,18:20:54.18:886,54,0
chr10	16563412	.	GAA	G	9943.48	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=8.379;DP=544;FS=2.353;HRun=11;HaplotypeScore=78.1348;InbreedingCoeff=0.9868;MQ=76.77;MQ0=1;MQRankSum=-1.869;QD=25.50;ReadPosRankSum=2.352;VQSLOD=5.0901;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:37:88.71:0,89,1218	1/1:1,7:8:21.05:224,21,0	0/0:20,0:16:23.06:0,23,318	0/0:20,0:17:9.67:0,10,177	1/1:3,14:17:33.02:351,33,0	1/1:4,12:16:30.07:319,30,0	1/1:3,17:20:39.09:415,39,0	1/1:7,15:24:50.31:483,50,0	1/1:4,16:20:45.10:479,45,0	1/1:6,14:20:39.06:414,39,0	1/1:0,15:15:42.10:445,42,0	0/0:15,0:16:39.12:0,39,561	1/1:1,8:9:21.05:224,21,0	1/1:2,10:12:27.06:286,27,0	0/0:23,0:24:63.20:0,63,928	0/0:14,0:14:42.14:0,42,646	1/1:1,31:32:78.19:830,78,0	0/0:23,0:23:57.18:0,57,839	1/1:1,14:15:42.09:440,42,0	1/1:5,12:17:45.11:479,45,0	1/1:3,23:26:57.14:607,57,0	1/1:2,22:24:60.15:639,60,0	1/1:1,14:15:42.11:447,42,0	1/1:3,22:25:66.14:702,66,0	1/1:1,15:16:42.10:447,42,0	1/1:1,28:29:84.18:883,84,0	1/1:1,21:22:60.15:639,60,0	1/1:1,6:7:18.04:192,18,0
chr10	16563519	.	GA	G	8155.18	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=10.817;DP=558;FS=7.907;HRun=10;HaplotypeScore=76.0089;InbreedingCoeff=0.9604;MQ=61.29;MQ0=4;MQRankSum=-2.066;QD=19.94;ReadPosRankSum=0.844;VQSLOD=5.6277;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,117,1265	1/1:2,5:6:11.99:104,12,0	0/0:15,1:11:7.06:0,7,293	0/0:8,0:4:11.94:0,12,108	1/1:4,19:23:47.94:417,48,0	1/1:0,19:19:53.99:469,54,0	1/1:2,21:23:47.98:417,48,0	1/1:8,17:24:38:318,38,0	1/1:1,14:15:41.99:365,42,0	1/1:4,22:26:68.98:598,69,0	1/1:2,21:23:59.98:521,60,0	0/0:21,0:21:54.14:0,54,588	1/1:3,13:16:38.99:339,39,0	1/1:0,7:7:18:156,18,0	0/0:21,0:21:51.13:0,51,557	0/0:18,0:18:42.11:0,42,465	1/1:3,30:33:68.98:599,69,0	0/0:20,0:20:48.13:0,48,531	1/1:8,19:27:26.75:454,27,0	1/1:1,18:19:53.99:469,54,0	1/1:0,12:12:32.99:287,33,0	1/1:6,12:18:32.99:286,33,0	1/1:2,18:20:44.99:391,45,0	1/1:1,18:19:50.99:443,51,0	1/1:3,22:24:56.97:495,57,0	1/1:3,25:28:41.80:592,42,0	1/1:4,15:19:41.95:359,42,0	1/1:1,4:5:8.99:78,9,0
chr10	16563801	.	AAC	A	1116.39	PASS	AB=1.000;AC=19;AF=0.396;AN=48;BaseQRankSum=0.459;DP=780;FS=6.977;HRun=0;HaplotypeScore=121.3878;InbreedingCoeff=0.4672;MQ=58.45;MQ0=35;MQRankSum=-0.643;QD=4.31;ReadPosRankSum=1.094;VQSLOD=2.4854;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:2.95:0,3,20	1/1:12,2:15:5.36:72,5,0	./.	./.	1/1:24,1:25:17.99:159,18,0	0/0:27,0:24:5.94:0,6,43	./.	./.	0/0:19,0:19:8.99:0,9,80	1/1:28,2:28:19.19:177,19,0	1/1:21,4:25:15.50:159,16,0	0/1:25,0:25:27.63:28,0,69	0/0:17,0:16:4.91:0,5,21	0/1:27,0:23:5.16:5,0,19	0/0:30,0:28:10.12:0,10,96	0/0:26,0:25:8.89:0,9,73	1/1:21,3:23:21.78:215,22,0	0/1:15,0:14:20.52:21,0,102	0/0:23,0:22:2.46:0,2,20	0/0:24,0:24:8.43:0,8,49	0/0:69,0:58:8.67:0,9,88	0/0:20,0:20:5.67:0,6,40	0/0:16,0:16:7.22:0,7,48	0/0:52,0:47:20.80:0,21,130	0/0:22,0:21:2.99:0,3,24	1/1:25,1:24:3.45:72,3,0	1/1:21,2:22:0.65:129,1,0	1/1:20,4:20:21.97:245,22,0
chr10	16563953	.	CAG	C	786.87	PASS	AB=0.993;AC=18;AF=0.346;AN=52;BaseQRankSum=10.729;DP=955;FS=2.075;HRun=0;HaplotypeScore=137.8387;InbreedingCoeff=-0.3747;MQ=35.94;MQ0=129;MQRankSum=-5.829;QD=1.34;ReadPosRankSum=4.229;VQSLOD=2.2969;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:68,0:59:93.17:0,93,1576	0/1:10,0:9:16.39:18,0,16	./.	./.	0/0:32,0:27:8.71:0,9,74	0/0:27,1:21:0.76:0,1,2	0/0:53,0:49:12.50:0,12,159	0/1:57,1:19:76.14:76,0,109	0/1:33,0:29:21.36:21,0,53	0/1:38,0:24:92.41:92,0,155	0/1:18,0:14:14.47:14,0,39	0/0:50,0:45:79.23:0,79,1556	0/1:34,0:28:10.63:11,0,12	0/1:37,0:32:23.42:23,0,54	0/0:39,0:35:63.15:0,63,1004	0/0:36,0:27:43.55:0,44,677	0/1:37,1:32:30.76:158,0,31	0/0:35,0:29:72.48:0,72,1126	0/1:31,1:20:99:114,0,188	0/1:22,0:13:7.14:7,0,19	0/1:97,0:73:48.75:49,0,67	0/1:29,0:25:5.36:5,0,154	0/1:15,0:13:10.99:11,0,38	0/1:51,0:43:55.72:56,0,116	0/0:21,0:13:5.99:0,6,50	0/1:45,0:33:99:184,0,162	0/1:21,1:19:14.34:76,0,14	1/1:6,1:6:2.75:20,3,0
chr10	16563955	.	GAC	G	2237.65	PASS	AB=0.877;AC=31;AF=0.596;AN=52;BaseQRankSum=3.835;DP=945;FS=10.206;HRun=0;HaplotypeScore=135.7063;InbreedingCoeff=0.3225;MQ=35.92;MQ0=128;MQRankSum=-3.101;QD=3.52;ReadPosRankSum=0.308;VQSLOD=2.2632;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:69,0:60:86.60:0,87,1453	1/1:7,3:9:5.92:76,6,0	./.	./.	0/1:28,3:26:0.27:0,0,0	1/1:21,7:21:2.97:24,3,0	0/0:45,7:48:7.56:0,8,55	0/1:54,2:18:18.04:59,0,18	1/1:18,15:29:7.47:53,7,0	0/1:29,8:23:40.61:248,0,41	1/1:14,4:14:5.89:76,6,0	0/0:51,0:46:43.54:0,44,1357	1/1:14,21:29:2.83:14,3,0	0/1:32,5:32:2.63:133,0,3	0/0:37,0:34:60.20:0,60,966	0/0:36,0:27:42.10:0,42,623	0/1:34,4:32:18.71:248,0,19	0/0:35,0:29:40.35:0,40,932	0/1:22,6:17:34.39:138,0,34	1/1:17,4:13:5.69:49,6,0	1/1:86,11:73:14.34:174,14,0	1/1:24,5:25:9.03:110,9,0	1/1:13,1:12:9.02:99,9,0	1/1:46,4:42:6.42:213,6,0	0/0:12,9:13:2.96:0,3,19	0/1:35,9:32:72.33:481,0,72	1/1:18,3:20:17.77:209,18,0	1/1:6,1:6:0.25:1,0,0
chr10	16563957	.	CACACACACACAG	C	3552.03	PASS	AB=1.000;AC=33;AF=0.635;AN=52;BaseQRankSum=2.434;DP=943;FS=6.514;HRun=0;HaplotypeScore=204.9644;InbreedingCoeff=0.2348;MQ=35.70;MQ0=127;MQRankSum=-3.942;QD=5.42;ReadPosRankSum=-1.139;VQSLOD=2.0278;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:69,0:60:88.96:0,89,2915	1/1:10,0:9:5.70:100,6,0	./.	./.	1/1:14,16:25:2.58:26,3,0	1/1:28,0:21:3.85:26,4,0	0/0:49,0:46:5.99:0,6,102	0/1:57,0:17:46.34:55,0,46	1/1:31,0:28:6.18:55,6,0	0/1:35,0:23:78.66:327,0,79	1/1:17,1:14:5.97:97,6,0	0/0:52,0:46:65.45:0,65,2456	1/1:35,0:30:2:22,2,0	0/1:38,0:33:10.79:133,0,11	0/0:38,0:35:63.21:0,63,1875	0/0:36,0:28:45.61:0,46,1300	0/1:39,0:33:33.23:600,0,33	0/0:34,0:28:54.40:0,54,2008	0/1:27,0:16:92.51:175,0,93	1/1:22,0:14:6.02:76,6,0	1/1:98,0:74:14.83:175,15,0	1/1:27,0:24:9.03:156,9,0	1/1:14,0:12:9.02:123,9,0	0/1:50,0:41:4.65:214,0,5	1/1:23,0:15:1.25:3,1,0	0/1:44,0:32:99:814,0,171	1/1:21,0:19:20.80:352,21,0	1/1:7,0:6:2.18:24,2,0
chr10	16563967	.	CAG	C	1434.48	PASS	AB=0.991;AC=34;AF=0.654;AN=52;BaseQRankSum=10.591;DP=857;FS=2.120;HRun=0;HaplotypeScore=143.7776;InbreedingCoeff=0.3811;MQ=34.94;MQ0=110;MQRankSum=-5.076;QD=2.44;ReadPosRankSum=-4.014;VQSLOD=1.3606;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:65,0:57:98.70:0,99,1690	1/1:7,0:6:8.56:44,9,0	./.	./.	1/1:26,1:23:2.59:18,3,0	0/1:28,0:22:0:1,0,0	0/0:40,1:39:5.55:0,6,83	0/1:50,0:15:19.03:97,0,19	1/1:29,1:26:6.92:33,7,0	0/1:30,0:21:47.05:144,0,47	1/1:16,0:12:5.47:26,5,0	0/0:46,0:41:78.28:0,78,1516	1/1:35,0:30:7.98:52,8,0	1/1:34,0:29:17.99:111,18,0	0/0:42,0:39:51.27:0,51,1186	0/0:36,0:28:51.06:0,51,786	0/1:33,1:31:15.11:202,0,15	0/0:28,1:23:19.81:0,20,1041	0/1:18,0:11:50.86:51,0,65	1/1:19,0:13:8.48:43,8,0	1/1:89,2:67:17.85:103,18,0	1/1:23,1:20:8.51:69,9,0	1/1:9,0:6:7.67:60,8,0	1/1:46,2:39:20.19:121,20,0	1/1:24,0:17:4.98:30,5,0	0/1:38,1:28:67.37:264,0,67	1/1:18,1:17:18.41:123,18,0	1/1:6,0:5:2.74:19,3,0
chr10	16563969	.	G	GAC	527.49	PASS	AB=1.000;AC=23;AF=0.442;AN=52;BaseQRankSum=7.329;DP=872;FS=9.967;HRun=0;HaplotypeScore=163.5378;InbreedingCoeff=0.1529;MQ=35.18;MQ0=102;MQRankSum=-3.024;QD=1.13;ReadPosRankSum=-4.695;VQSLOD=0.3838;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:68,0:59:72.53:0,73,1135	0/0:7,0:6:3.66:0,4,25	./.	./.	1/1:28,0:24:2.99:26,3,0	1/1:27,0:22:0.52:2,1,0	0/0:38,3:39:7.91:0,8,89	0/0:50,0:15:5.07:0,5,64	1/1:29,1:26:5.47:22,5,0	0/1:31,0:22:76.90:77,0,90	0/0:16,0:12:2.94:0,3,22	0/0:49,0:44:80.86:0,81,1017	1/1:33,0:30:5.37:39,5,0	0/1:33,0:28:13.87:14,0,52	0/0:43,1:41:66.17:0,66,827	0/0:37,0:29:48:0,48,603	0/1:35,0:32:66.99:190,0,67	0/0:29,0:24:50.27:0,50,740	0/1:18,0:10:20.54:21,0,70	1/1:20,0:14:5.75:50,6,0	1/1:91,1:68:2.73:24,3,0	0/1:23,0:19:11.06:11,0,18	0/0:9,0:6:1.25:0,1,3	0/0:47,0:38:6.16:0,6,43	1/1:25,0:18:2.85:8,3,0	0/1:40,0:30:99:141,0,193	0/1:23,0:21:26.59:32,0,27	1/1:7,0:6:2.98:25,3,0
chr10	16563975	.	C	CAG	121	PASS	AB=0.991;AC=13;AF=0.250;AN=52;BaseQRankSum=5.560;DP=844;FS=7.941;HRun=0;HaplotypeScore=160.5438;InbreedingCoeff=0.0800;MQ=35.39;MQ0=88;MQRankSum=-2.591;QD=0.50;ReadPosRankSum=-1.752;VQSLOD=1.3282;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:68,1:61:99:0,100,1451	0/0:7,0:6:5.96:0,6,52	./.	./.	1/1:28,0:25:2.36:9,2,0	0/0:28,0:23:2.71:0,3,13	0/0:42,0:40:14.53:0,15,156	0/0:48,0:15:7.83:0,8,156	0/0:28,0:24:4.72:0,5,19	0/0:30,0:22:6.39:0,6,235	0/0:17,0:14:5.96:0,6,52	0/0:46,0:41:91.74:0,92,1278	1/1:31,0:29:2.55:61,3,0	0/0:31,0:27:11.78:0,12,121	0/0:43,0:40:75.15:0,75,1070	0/0:35,1:30:54.14:0,54,782	0/1:31,0:29:53.55:54,0,197	0/0:28,0:23:65.39:0,65,940	0/1:18,0:9:1.65:2,0,99	0/1:17,0:11:7.50:14,0,8	0/0:92,0:68:8.34:0,8,48	0/1:19,0:16:11.04:11,0,28	0/0:10,0:8:1.24:0,1,23	0/0:39,0:33:13.64:0,14,101	0/1:25,0:20:11:11,0,18	0/1:39,1:31:78.80:79,0,339	0/1:22,1:21:0.49:0,0,87	1/1:9,0:8:1.80:5,2,0
chr10	16563977	.	CAG	C	448.48	PASS	AB=0.992;AC=22;AF=0.423;AN=52;BaseQRankSum=8.701;DP=837;FS=14.923;HRun=0;HaplotypeScore=157.3255;InbreedingCoeff=0.0005;MQ=35.93;MQ0=82;MQRankSum=-5.310;QD=0.86;ReadPosRankSum=-1.397;VQSLOD=1.8663;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:67,0:60:64.21:0,64,1638	0/1:7,0:6:1.56:19,0,2	./.	./.	1/1:27,1:25:2.58:17,3,0	0/0:25,0:21:1.59:0,2,15	0/1:44,1:43:10.19:10,0,168	0/1:46,0:14:68.38:68,0,76	1/1:27,1:26:0.30:18,0,0	0/1:28,1:21:42.62:43,0,146	0/0:17,0:14:2.68:0,3,48	0/0:46,0:41:88.45:0,88,1410	0/1:32,1:31:6.41:83,0,6	1/1:32,0:28:6.74:72,7,0	0/0:43,0:40:51.12:0,51,1199	0/0:33,1:29:54.15:0,54,928	0/1:30,0:28:18.48:18,0,258	0/0:28,0:23:59.41:0,59,1095	0/0:17,0:8:4.25:0,4,74	0/0:18,0:12:0.79:0,1,24	0/1:90,0:66:13.56:14,0,37	1/1:17,2:16:1.80:36,2,0	1/1:8,0:7:7.19:45,7,0	0/1:39,0:34:9.45:44,0,9	1/1:23,2:20:5.24:31,5,0	0/1:40,0:32:30.83:31,0,241	0/1:23,0:21:28.12:50,0,28	0/0:8,0:7:2.58:0,3,16
chr10	16563987	.	CAT	C	1102.92	PASS	AB=0.943;AC=26;AF=0.481;AN=54;BaseQRankSum=7.197;DP=781;FS=11.515;HRun=0;HaplotypeScore=154.7304;InbreedingCoeff=0.0214;MQ=37.54;MQ0=60;MQRankSum=-2.840;QD=2.08;ReadPosRankSum=-3.293;VQSLOD=0.9209;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:69,0:64:99:0,105,1576	1/1:8,0:7:5.30:27,5,0	./.	0/0:11,0:1:3.01:0,3,37	1/1:23,3:24:2.36:17,2,0	0/1:18,2:18:0.42:0,0,1	0/1:40,0:38:30:30,0,141	0/1:42,0:16:24.49:24,0,90	1/1:25,3:25:20.22:137,20,0	0/1:22,4:20:91.93:136,0,92	0/0:15,0:13:3.01:0,3,34	0/0:38,0:35:23.62:0,24,800	0/1:20,6:25:35.40:93,0,35	1/1:26,3:26:5.50:70,5,0	0/0:41,0:38:42.22:0,42,1004	0/0:36,0:32:37.01:0,37,815	0/1:26,0:25:33.49:33,0,404	0/0:26,0:24:66.09:0,66,1017	0/1:14,0:8:9.31:9,0,32	0/1:17,0:11:12.51:13,0,18	0/1:85,0:69:16.99:17,0,24	1/1:16,2:15:4.80:66,5,0	1/1:9,0:8:14.61:94,15,0	0/1:32,2:30:6.18:98,0,6	1/1:18,2:16:10.08:61,10,0	0/1:31,7:32:99:268,0,159	0/1:21,1:20:64.08:77,0,64	0/0:7,2:8:2.67:0,3,26
chr10	16563995	.	C	CAG	235.94	PASS	AB=0.996;AC=15;AF=0.268;AN=56;BaseQRankSum=6.188;DP=796;FS=5.192;HRun=0;HaplotypeScore=163.0682;InbreedingCoeff=-0.2700;MQ=38.98;MQ0=53;MQRankSum=0.709;QD=0.56;ReadPosRankSum=3.169;VQSLOD=2.5868;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:63,0:58:99:0,102,1431	0/1:9,0:8:18.81:19,0,35	0/0:11,0:3:2.97:0,3,21	0/0:17,0:3:6.02:0,6,87	0/1:27,0:25:3.98:4,0,60	1/1:18,0:18:0.05:1,0,0	0/1:44,0:42:9.72:10,0,207	0/0:39,0:20:38.56:0,39,331	0/1:26,1:25:14.74:15,0,60	0/1:29,0:24:25.68:26,0,248	0/1:15,0:14:15.41:15,0,18	0/0:37,1:35:52.98:0,53,801	0/0:29,0:27:10.79:0,11,130	0/1:29,0:26:22.34:22,0,95	0/0:40,0:37:59.97:0,60,823	0/0:36,2:34:59.84:0,60,788	0/0:22,0:22:8.09:0,8,397	0/0:24,0:23:63.08:0,63,863	0/1:17,0:8:6.28:6,0,58	0/1:16,0:10:13.85:14,0,14	0/1:88,2:76:20.87:21,0,110	0/0:20,0:16:5.08:0,5,48	0/0:10,0:9:8.25:0,8,72	0/1:35,0:33:2.39:2,0,139	0/0:17,0:15:11.91:0,12,95	0/1:38,0:33:99:141,0,233	0/1:24,0:22:79.54:80,0,100	0/0:7,0:9:5.97:0,6,63
chr10	16564008	.	ACACG	A	2640.81	PASS	AB=0.985;AC=31;AF=0.554;AN=56;BaseQRankSum=2.747;DP=748;FS=22.094;HRun=0;HaplotypeScore=172.2024;InbreedingCoeff=0.1122;MQ=45.02;MQ0=22;MQRankSum=-1.548;QD=5.06;ReadPosRankSum=-5.438;VQSLOD=-0.5526;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:56:95.43:0,95,1949	1/1:7,0:7:6.01:29,6,0	0/0:16,0:6:1.27:0,1,82	0/0:21,0:9:4.11:0,4,155	1/1:23,0:23:6.02:41,6,0	1/1:18,2:20:12.44:97,12,0	0/1:45,0:44:70.69:207,0,71	0/1:33,0:22:30.97:269,0,31	1/1:26,3:28:25.87:205,26,0	0/1:31,0:28:55.22:304,0,55	0/1:15,0:15:10.29:81,0,10	0/0:34,0:33:17.05:0,17,1042	0/1:19,3:22:12.03:240,0,12	1/1:26,3:28:7.26:176,7,0	0/0:39,0:37:62.09:0,62,1232	0/0:31,0:29:54.11:0,54,1084	0/1:21,0:21:65.35:65,0,316	0/0:27,0:26:69.94:0,70,1274	1/1:14,0:9:14.78:115,15,0	0/1:11,0:10:13.80:33,0,14	1/1:75,0:70:13.79:241,14,0	0/1:20,1:17:1.36:66,0,1	1/1:12,0:12:19.22:134,19,0	1/1:34,0:33:4.72:160,5,0	1/1:16,0:15:5.67:90,6,0	0/1:31,0:28:79.65:134,0,80	0/1:23,0:21:37.76:100,0,38	0/1:10,0:9:18.43:35,0,18
chr10	16564010	.	ACG	A	3562.27	PASS	AB=0.983;AC=39;AF=0.696;AN=56;BaseQRankSum=3.747;DP=739;FS=17.382;HRun=0;HaplotypeScore=157.3936;InbreedingCoeff=0.5118;MQ=46.30;MQ0=19;MQRankSum=0.547;QD=6.52;ReadPosRankSum=-3.269;VQSLOD=1.4824;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:56:95.60:0,96,1603	1/1:7,0:7:8.40:53,8,0	0/0:17,0:7:1.26:0,1,61	0/0:22,0:10:7.29:0,7,188	1/1:21,1:23:11.34:90,11,0	1/1:20,0:20:12.46:102,12,0	1/1:41,2:43:16.04:315,16,0	0/1:29,0:21:2.06:290,0,2	1/1:27,1:27:34.21:264,34,0	1/1:33,0:30:13.75:402,14,0	1/1:17,0:17:17:142,17,0	0/1:32,0:31:5.35:5,0,733	1/1:19,2:21:13.40:204,13,0	0/1:29,0:28:3.68:160,0,4	0/0:37,0:35:64.91:0,65,979	0/0:32,0:30:40.84:0,41,846	0/1:19,1:21:51.76:52,0,165	0/0:28,0:27:72.94:0,73,1074	1/1:14,0:10:17.48:135,17,0	1/1:11,0:10:4.96:33,5,0	1/1:68,0:64:30.22:248,30,0	1/1:21,1:18:7.75:88,8,0	1/1:13,0:13:26.67:213,27,0	1/1:34,0:33:24.06:234,24,0	1/1:14,2:15:10.34:62,10,0	1/1:30,0:27:23.72:253,24,0	1/1:22,1:22:3.77:166,4,0	0/1:11,0:10:12.45:52,0,12
chr10	16564333	.	A	AACAC	6757.47	PASS	AB=0.776;AC=39;AF=0.722;AN=54;BaseQRankSum=-3.732;DP=556;FS=1.204;HRun=0;HaplotypeScore=87.7235;InbreedingCoeff=0.5065;MQ=68.95;MQ0=15;MQRankSum=1.575;QD=16.89;ReadPosRankSum=-0.467;VQSLOD=4.1771;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:31:63.18:0,63,929	1/1:2,5:8:6.02:145,6,0	0/1:68,0:41:27.58:28,0,339	0/0:56,0:24:13.10:0,13,168	1/1:9,2:18:11.96:274,12,0	1/1:5,13:20:14.97:336,15,0	0/1:8,11:21:21.53:491,0,22	0/1:20,4:24:26.68:387,0,27	1/1:6,12:20:23.82:518,24,0	1/1:4,4:9:14.78:242,15,0	1/1:0,4:5:6.02:145,6,0	0/1:5,0:7:0.52:1,0,113	1/1:3,7:13:23.82:514,24,0	1/1:6,4:14:15.05:362,15,0	0/0:15,0:16:36.11:0,36,537	0/0:9,0:12:27.07:0,27,365	1/1:6,12:26:37.59:580,38,0	0/0:23,0:25:57.14:0,57,848	1/1:8,1:12:16.46:222,16,0	./.	1/1:6,7:17:11.78:229,12,0	1/1:2,2:15:9.03:138,9,0	1/1:1,4:8:5.75:85,6,0	1/1:7,6:25:40.18:592,40,0	1/1:3,7:12:8.77:157,9,0	1/1:5,4:13:23.80:366,24,0	1/1:7,7:21:35.06:596,35,0	0/1:4,7:13:27.49:353,0,27
chr10	16564463	.	A	ATGTGTGTGTGTG	4958.62	PASS	AB=0.830;AC=37;AF=0.685;AN=54;BaseQRankSum=1.799;DP=456;FS=16.878;HRun=0;HaplotypeScore=158.5233;InbreedingCoeff=0.6195;MQ=59.32;MQ0=4;MQRankSum=-6.634;QD=15.45;ReadPosRankSum=-3.253;VQSLOD=2.2643;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:25:23.29:0,23,715	1/1:2,1:7:6.02:213,6,0	./.	0/0:20,0:10:2.99:0,3,24	0/1:12,3:25:0:0,0,0	1/1:3,0:22:10.39:192,10,0	1/1:9,0:9:2.99:23,3,0	1/1:40,0:40:45.07:716,45,0	1/1:5,0:11:12.04:163,12,0	1/1:7,3:15:24.04:981,24,0	1/1:4,3:10:3.01:132,3,0	0/0:3,0:3:3.01:0,3,104	1/1:8,0:12:13.28:152,13,0	1/1:4,0:11:9.88:188,10,0	0/0:8,0:8:12.04:0,12,415	0/0:13,0:13:24.06:0,24,643	0/1:14,0:14:3.61:82,0,4	0/0:24,0:26:44.25:0,44,1044	1/1:12,0:16:21.03:271,21,0	1/1:7,0:23:14.59:214,15,0	0/0:12,0:18:0.47:0,0,1	1/1:3,0:10:5.86:87,6,0	1/1:5,0:14:2.85:43,3,0	0/1:12,0:15:0:0,0,0	1/1:5,0:15:13.29:182,13,0	1/1:9,0:15:10.85:311,11,0	1/1:8,2:20:15.34:659,15,0	1/1:3,2:12:9.03:351,9,0
chr10	16565889	.	AAC	A	9148.46	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=13.753;DP=700;FS=6.171;HRun=0;HaplotypeScore=161.5000;InbreedingCoeff=0.9828;MQ=73.53;MQ0=4;MQRankSum=-3.651;QD=18.67;ReadPosRankSum=0.951;VQSLOD=4.7509;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,135,2110	1/1:9,1:10:13.08:150,13,0	0/0:44,0:26:68.05:0,68,811	0/0:34,0:26:47.40:0,47,581	1/1:21,0:21:22.76:269,23,0	1/1:21,0:21:56.88:475,57,0	1/1:14,0:14:33:290,33,0	1/1:42,0:42:99:870,105,0	1/1:26,0:26:71.93:612,72,0	1/1:22,1:23:60.02:368,60,0	1/1:18,2:20:44.05:281,44,0	0/0:24,0:24:72.24:0,72,1160	1/1:26,0:26:68.20:559,68,0	1/1:22,0:22:53.89:451,54,0	0/0:21,0:21:63.22:0,63,1045	0/0:20,0:20:57.11:0,57,832	1/1:28,2:30:38.96:234,39,0	0/0:21,0:21:60.16:0,60,961	1/1:17,0:16:46.99:365,47,0	1/1:24,0:24:62.31:501,62,0	1/1:31,0:31:80.87:695,81,0	1/1:31,0:31:86.77:728,87,0	1/1:23,0:23:65.74:545,66,0	1/1:25,0:25:56.95:488,57,0	1/1:15,0:15:38.84:333,39,0	1/1:27,1:27:68.50:450,69,0	1/1:22,2:24:42.37:348,42,0	1/1:17,0:17:8.30:136,8,0
chr10	16565890	.	AC	A	16016.06	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=13.401;DP=697;FS=4.918;HRun=1;HaplotypeScore=123.7454;InbreedingCoeff=0.9997;MQ=74.27;MQ0=4;MQRankSum=-2.325;QD=32.82;ReadPosRankSum=1.133;VQSLOD=4.4487;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,133,1697	1/1:4,6:10:26.65:338,27,0	0/0:42,0:25:69.73:0,70,698	0/0:34,0:27:47.40:0,47,485	1/1:10,11:21:53.28:617,53,0	1/1:0,21:21:57.19:780,57,0	1/1:0,14:14:33.11:453,33,0	1/1:3,39:42:99:1387,117,0	1/1:0,26:26:72.24:981,72,0	1/1:1,22:23:66.84:704,67,0	1/1:10,10:20:56.76:606,57,0	0/0:24,0:24:72.05:0,72,892	1/1:1,25:26:68.73:899,69,0	1/1:0,22:22:54.18:738,54,0	0/0:22,0:22:66.20:0,66,839	0/0:19,0:19:57.13:0,57,679	1/1:2,28:30:42.07:540,42,0	0/0:21,0:21:60.15:0,60,756	1/1:2,15:16:47.71:560,48,0	1/1:0,22:22:62.85:766,63,0	1/1:0,31:31:81.16:1086,81,0	1/1:0,31:31:87.10:1145,87,0	1/1:0,23:23:66.08:876,66,0	1/1:0,25:25:57.19:782,57,0	1/1:0,15:15:39.13:526,39,0	1/1:16,12:27:75.15:875,75,0	1/1:9,15:24:63.77:841,64,0	1/1:8,9:17:43.19:514,43,0
chr10	16566746	.	GTA	G	254.94	PASS	AC=12;AF=1.000;AN=12;DP=84;FS=0.000;HRun=0;HaplotypeScore=12.5597;MQ=14.42;MQ0=67;QD=10.62;VQSLOD=2.4614;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	1/1:2,1:1:3.01:38,3,0	./.	./.	./.	./.	1/1:3,1:3:3.01:38,3,0	1/1:2,1:1:3.01:38,3,0	./.	./.	./.	./.	./.	./.	./.	./.	1/1:2,3:5:2.97:20,3,0	./.	./.	./.	./.	./.	./.	1/1:2,1:1:3.01:36,3,0	1/1:2,4:4:12.04:153,12,0
chr10	16569703	.	T	TC	5109.96	PASS	AB=0.750;AC=47;AF=0.979;AN=48;BaseQRankSum=-1.363;DP=244;FS=0.000;HRun=1;HaplotypeScore=26.1044;InbreedingCoeff=-0.0610;MQ=23.01;MQ0=42;MQRankSum=-1.732;QD=25.55;ReadPosRankSum=1.590;VQSLOD=4.5622;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,7:4:12.04:179,12,0	1/1:5,4:7:14.26:186,14,0	./.	./.	1/1:4,6:7:11.95:151,12,0	1/1:2,7:7:20.93:259,21,0	1/1:5,4:2:3.01:45,3,0	1/1:5,1:1:3.01:45,3,0	1/1:0,7:5:12.04:179,12,0	1/1:1,3:4:12.04:172,12,0	1/1:1,4:4:9.03:134,9,0	1/1:0,15:15:42.14:612,42,0	1/1:2,3:2:6.02:89,6,0	1/1:0,8:8:24.08:357,24,0	1/1:1,13:12:36.12:536,36,0	1/1:2,7:7:18.06:268,18,0	1/1:3,3:4:11.93:150,12,0	1/1:5,7:4:8.96:108,9,0	./.	1/1:0,9:9:24.08:357,24,0	./.	1/1:3,3:4:6.02:78,6,0	1/1:0,5:5:12.04:172,12,0	0/1:2,1:2:13.82:39,0,14	1/1:2,7:8:17.95:216,18,0	1/1:4,6:7:21.03:288,21,0	1/1:0,10:8:21.07:313,21,0	1/1:0,4:4:12.04:179,12,0
chr10	16570219	.	C	CT	13262.33	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=-9.501;DP=641;FS=47.417;HRun=8;HaplotypeScore=65.0260;InbreedingCoeff=0.9974;MQ=70.23;MQ0=0;MQRankSum=-3.511;QD=27.40;ReadPosRankSum=-0.507;VQSLOD=1.7131;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,137,1231	1/1:1,9:10:21.06:238,21,0	0/0:9,0:9:18.48:0,18,166	0/0:13,0:12:23.97:0,24,211	1/1:4,32:36:53.72:842,54,0	1/1:2,29:31:72.10:794,72,0	1/1:2,10:12:30.09:346,30,0	1/1:7,26:32:75.22:865,75,0	1/1:3,17:20:48.14:554,48,0	1/1:0,20:21:63.01:694,63,0	1/1:0,19:19:48.08:537,48,0	0/0:22,0:22:54:0,54,489	1/1:1,16:17:33.10:380,33,0	1/1:0,18:18:48.14:554,48,0	0/0:24,0:24:62.95:0,63,562	0/0:29,0:29:84.04:0,84,765	1/1:1,24:25:69.21:796,69,0	0/0:14,0:14:35.97:0,36,321	1/1:2,27:29:81.21:921,81,0	1/1:2,20:22:48.10:535,48,0	1/1:5,14:19:45.08:504,45,0	1/1:3,15:18:42.12:479,42,0	1/1:3,19:22:54.16:623,54,0	1/1:1,18:19:45.13:519,45,0	1/1:3,24:27:63.13:704,63,0	1/1:4,26:30:78.19:870,78,0	1/1:3,26:29:66.02:748,66,0	1/1:0,27:27:66.19:758,66,0
chr10	16571675	.	C	CAG	2651.94	PASS	AB=0.794;AC=31;AF=0.596;AN=52;BaseQRankSum=-1.931;DP=423;FS=1.595;HRun=0;HaplotypeScore=63.7939;InbreedingCoeff=0.4025;MQ=42.36;MQ0=15;MQRankSum=-1.043;QD=10.65;ReadPosRankSum=-0.672;VQSLOD=3.0772;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:27.08:0,27,316	0/0:6,0:6:0.30:0,0,1	0/0:32,0:3:3:0,3,25	0/0:49,0:9:2.84:0,3,46	./.	1/1:7,5:12:9.03:142,9,0	0/1:5,8:13:40.22:346,0,40	0/1:18,4:21:11.12:277,0,11	1/1:18,6:24:32.83:417,33,0	0/1:16,0:16:10.99:72,0,11	./.	0/0:12,0:12:18.05:0,18,209	0/1:6,1:7:3.22:78,0,3	1/1:13,2:15:14.88:186,15,0	0/0:12,0:12:15.04:0,15,172	0/0:10,0:11:14.24:0,14,125	1/1:10,0:10:8.62:51,9,0	0/0:6,0:6:7.26:0,7,102	1/1:15,2:15:12.02:148,12,0	1/1:1,1:2:3.01:47,3,0	0/1:5,7:11:11.04:306,0,11	1/1:8,4:12:9.03:142,9,0	1/1:3,3:6:3.01:47,3,0	1/1:9,13:22:18.06:258,18,0	1/1:10,2:12:5.75:59,6,0	1/1:21,0:21:7.74:110,8,0	1/1:15,0:14:9.68:83,10,0	1/1:10,0:9:9.14:53,9,0
chr10	16572578	.	CCTCTCTCTCTCTCTCTCTCT	C	6439.41	PASS	AB=0.829;AC=23;AF=0.426;AN=54;BaseQRankSum=9.376;DP=537;FS=2.151;HRun=0;HaplotypeScore=254.3463;InbreedingCoeff=0.8137;MQ=65.49;MQ0=8;MQRankSum=-7.899;QD=29.14;ReadPosRankSum=3.552;VQSLOD=3.5507;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:45:54.17:0,54,3222	0/0:6,0:5:8.39:0,8,322	0/0:10,0:8:2.70:0,3,176	0/0:20,0:17:9.82:0,10,319	0/0:17,0:22:24.07:0,24,889	1/1:5,6:11:18.06:929,18,0	1/1:19,6:26:8.94:277,9,0	1/1:22,0:20:6.01:75,6,0	1/1:9,14:23:27.09:1449,27,0	0/0:31,0:29:57.19:0,57,3760	0/0:9,0:9:9.50:0,10,503	0/0:13,0:13:27.56:0,28,1752	1/1:6,5:11:12.04:644,12,0	1/1:10,12:24:33.11:1650,33,0	0/0:14,0:15:30.10:0,30,2234	0/0:13,0:15:36.12:0,36,2441	0/0:23,0:29:66.19:0,66,4481	0/0:17,0:23:36.12:0,36,2523	./.	1/1:5,0:5:3.01:83,3,0	0/1:27,7:34:0:0,0,0	1/1:10,5:15:6.02:247,6,0	1/1:9,2:11:5.83:321,6,0	1/1:12,12:23:10.27:441,10,0	1/1:10,4:14:6.02:322,6,0	0/0:23,0:29:54.19:0,54,3263	0/0:19,0:22:34:0,34,2222	0/0:15,0:14:30.08:0,30,1323
chr10	16573374	.	A	AG	8442.30	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=14.290;DP=464;FS=0.786;HRun=3;HaplotypeScore=119.5683;InbreedingCoeff=0.9801;MQ=65.52;MQ0=7;MQRankSum=-12.307;QD=29.11;ReadPosRankSum=-1.313;VQSLOD=3.7509;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,114,1383	1/1:0,3:3:9.03:129,9,0	0/0:23,0:20:28.03:0,28,641	0/0:32,0:29:58.66:0,59,713	1/1:1,10:11:27.09:381,27,0	1/1:8,4:12:33.02:364,33,0	1/1:7,11:16:36.90:435,37,0	1/1:22,7:26:61.60:632,62,0	1/1:5,4:8:23.95:272,24,0	1/1:5,10:13:39.11:511,39,0	1/1:3,8:11:26.98:360,27,0	0/0:17,0:17:48.15:0,48,591	1/1:6,11:17:45.14:619,45,0	1/1:3,10:13:39.12:521,39,0	0/0:15,0:15:45.14:0,45,558	0/0:7,0:7:21.07:0,21,260	1/1:9,4:13:28.11:289,28,0	0/0:40,0:40:99:0,117,1419	1/1:9,7:15:38.43:453,38,0	1/1:2,7:9:21.07:297,21,0	1/1:8,4:12:14.37:177,14,0	1/1:5,15:20:54.03:700,54,0	1/1:6,8:14:27.07:350,27,0	1/1:9,7:15:28.90:357,29,0	1/1:3,5:7:15.01:192,15,0	1/1:3,8:11:30.09:411,30,0	1/1:14,10:23:53.69:647,54,0	1/1:4,4:9:27.08:343,27,0
chr10	16573376	.	GA	G	6177.70	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=14.406;DP=479;FS=0.000;HRun=1;HaplotypeScore=131.0038;InbreedingCoeff=0.9806;MQ=72.47;MQ0=9;MQRankSum=-12.922;QD=21.30;ReadPosRankSum=-0.110;VQSLOD=4.6567;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,117,1749	1/1:3,0:3:8.90:61,9,0	0/0:28,0:25:40.91:0,41,925	0/0:38,0:35:69.75:0,70,939	1/1:11,1:12:29.74:225,30,0	1/1:7,5:12:32.70:314,33,0	1/1:12,6:16:41.64:316,42,0	1/1:14,17:28:71.88:742,72,0	1/1:5,4:8:23.92:237,24,0	1/1:12,3:13:38.75:348,39,0	1/1:9,2:11:26.74:192,27,0	0/0:17,0:17:51.16:0,51,780	1/1:12,4:16:44.69:383,45,0	1/1:12,2:13:38.75:345,39,0	0/0:16,0:16:48.15:0,48,744	0/0:8,0:8:24.07:0,24,350	1/1:8,6:14:28.66:239,29,0	0/0:40,0:40:99:0,117,1825	1/1:8,7:14:37.36:362,37,0	1/1:7,2:9:20.80:160,21,0	1/1:7,6:12:14.85:122,15,0	1/1:17,3:20:53.70:487,54,0	1/1:9,4:13:26.82:227,27,0	1/1:8,7:14:29.86:299,30,0	1/1:6,2:7:14.84:101,15,0	1/1:9,2:11:32.60:256,33,0	1/1:17,5:21:56.70:481,57,0	1/1:7,2:9:26.92:280,27,0
chr10	16573384	.	GA	G	5331.66	PASS	AB=0.771;AC=40;AF=0.714;AN=56;BaseQRankSum=13.065;DP=486;FS=6.393;HRun=1;HaplotypeScore=134.4897;InbreedingCoeff=0.7762;MQ=75.11;MQ0=9;MQRankSum=-13.316;QD=18.13;ReadPosRankSum=3.442;VQSLOD=5.1219;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,112,1734	1/1:4,0:4:11.88:97,12,0	0/0:27,1:25:71.13:0,71,989	0/0:40,0:37:82.22:0,82,1076	1/1:10,2:12:26.65:192,27,0	1/1:10,3:13:23.87:242,24,0	0/1:14,5:16:4.45:239,0,4	1/1:12,13:25:68.89:736,69,0	1/1:5,5:10:26.86:271,27,0	1/1:11,3:12:35.67:299,36,0	1/1:9,2:11:26.67:184,27,0	0/0:18,0:18:54.18:0,54,853	1/1:12,2:14:19.25:270,19,0	1/1:11,6:15:10.83:270,11,0	0/0:18,0:18:54.18:0,54,843	0/0:9,0:9:27.09:0,27,411	1/1:11,6:16:1.85:154,2,0	0/0:38,0:38:99:0,114,1793	1/1:8,8:16:14.97:368,15,0	1/1:8,4:12:3.89:213,4,0	1/1:8,6:13:9.55:82,10,0	1/1:21,0:21:27.51:409,28,0	1/1:9,6:15:32.69:293,33,0	1/1:9,3:12:20.90:203,21,0	1/1:6,2:8:14.84:117,15,0	1/1:8,2:10:29.65:222,30,0	1/1:20,1:21:20.24:331,20,0	0/1:6,3:7:7.48:140,0,7
chr10	16573385	.	A	AG	9034.87	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=12.110;DP=487;FS=5.760;HRun=1;HaplotypeScore=121.9074;InbreedingCoeff=0.9805;MQ=74.96;MQ0=8;MQRankSum=-13.150;QD=30.63;ReadPosRankSum=2.582;VQSLOD=4.4968;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,111,1394	1/1:1,3:4:12.04:174,12,0	0/0:28,0:25:69.43:0,69,806	0/0:40,0:37:69.18:0,69,886	1/1:2,10:12:27.09:397,27,0	1/1:4,9:13:24.06:304,24,0	1/1:7,11:16:35.73:528,36,0	1/1:14,13:27:72.19:928,72,0	1/1:7,4:11:27.07:349,27,0	1/1:4,10:12:36.11:489,36,0	1/1:2,9:11:27.09:401,27,0	0/0:18,0:18:54.18:0,54,699	1/1:4,11:15:36.88:556,37,0	1/1:6,11:15:33.82:499,34,0	0/0:19,0:19:54.17:0,54,699	0/0:9,0:9:24.08:0,24,309	1/1:7,10:16:19.24:294,19,0	0/0:38,0:38:99:0,114,1443	1/1:10,7:17:39.48:563,39,0	1/1:5,7:12:24.88:385,25,0	1/1:6,7:12:12:179,12,0	1/1:2,18:20:48.86:710,49,0	1/1:7,8:15:32.13:423,32,0	1/1:4,8:12:21.07:287,21,0	1/1:4,4:8:15.05:219,15,0	1/1:2,8:10:30.09:417,30,0	1/1:2,17:20:45.63:694,46,0	1/1:3,6:7:17.07:239,17,0
chr10	16573919	.	GTTTTTTTTTGT	G	1702.80	PASS	AB=0.965;AC=17;AF=0.304;AN=56;BaseQRankSum=0.264;DP=529;FS=16.512;HRun=0;HaplotypeScore=205.3869;InbreedingCoeff=0.0572;MQ=64.09;MQ0=10;MQRankSum=-3.283;QD=6.84;ReadPosRankSum=5.477;VQSLOD=1.3042;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:82.48:0,82,3212	0/0:8,0:8:18.04:0,18,386	0/0:30,0:16:30.46:0,30,624	0/0:17,0:9:11.50:0,12,231	0/0:16,0:16:25.62:0,26,782	0/1:15,2:17:27.75:145,0,28	0/1:18,0:18:1.55:141,0,2	0/1:21,1:22:4.41:304,0,4	1/1:15,0:15:3.53:144,4,0	0/0:22,0:21:0.37:0,0,908	0/0:18,0:18:10.04:0,10,822	0/0:17,0:17:39.09:0,39,1611	0/1:11,1:12:27.42:131,0,27	0/1:11,0:12:61.78:71,0,62	0/0:12,0:12:24.05:0,24,1136	0/0:21,0:21:39.09:0,39,1686	0/1:17,0:16:10.70:11,0,787	0/0:21,0:21:54.16:0,54,2299	0/1:17,0:16:99:233,0,136	0/1:18,0:18:23.29:23,0,160	1/1:15,1:16:14.67:270,15,0	0/1:20,0:20:39.72:56,0,40	1/1:21,0:21:6.31:112,6,0	0/1:21,1:22:18.79:83,0,19	0/1:21,1:22:46.86:145,0,47	0/0:25,0:23:57.12:0,57,1445	0/0:28,0:26:20.63:0,21,1917	0/0:13,0:13:18.04:0,18,496
chr10	16573921	.	TTTTTTTTG	T	2840.75	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=5.500;DP=525;FS=28.086;HRun=0;HaplotypeScore=175.9456;InbreedingCoeff=0.4755;MQ=62.35;MQ0=11;MQRankSum=-3.049;QD=8.48;ReadPosRankSum=4.880;VQSLOD=1.1489;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:90.18:0,90,2542	0/0:6,0:6:16.67:0,17,261	0/0:29,0:14:30.05:0,30,510	0/0:18,0:9:0.44:0,0,155	0/1:16,0:16:26.90:27,0,456	1/1:16,0:16:26.69:258,27,0	1/1:16,0:16:23.86:221,24,0	1/1:21,1:22:17.82:348,18,0	1/1:15,1:16:29.89:303,30,0	0/1:21,0:20:52.51:53,0,553	0/1:17,0:17:51.92:52,0,495	0/0:16,0:16:39.04:0,39,1166	1/1:10,0:10:7.10:130,7,0	1/1:13,0:13:15.77:171,16,0	0/0:14,0:14:30.02:0,30,982	0/0:21,0:21:39.06:0,39,1221	0/1:17,0:16:11.01:11,0,521	0/0:21,0:21:54.11:0,54,1639	0/1:19,0:18:8.04:214,0,8	1/1:19,0:19:13.49:213,13,0	1/1:16,0:16:21.01:278,21,0	1/1:21,0:21:38.25:294,38,0	1/1:22,1:23:7.61:110,8,0	0/1:22,0:22:2.67:103,0,3	1/1:22,1:23:21.20:250,21,0	0/0:24,0:22:6.21:0,6,937	0/1:28,0:26:4.97:5,0,1239	0/0:9,0:9:17.70:0,18,300
chr10	16573924	.	TTTTTG	T	5520.93	PASS	AB=0.921;AC=30;AF=0.536;AN=56;BaseQRankSum=4.090;DP=512;FS=23.713;HRun=0;HaplotypeScore=139.8552;InbreedingCoeff=0.5455;MQ=58.53;MQ0=11;MQRankSum=-3.105;QD=16.99;ReadPosRankSum=2.213;VQSLOD=2.4908;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:95.31:0,95,1659	0/0:6,0:6:9.28:0,9,119	0/0:26,0:11:29.64:0,30,333	0/0:18,0:8:0.48:0,0,94	0/1:15,0:15:18.93:19,0,224	1/1:6,10:16:27.09:479,27,0	1/1:3,12:15:24.08:442,24,0	1/1:7,10:17:31.72:457,32,0	1/1:2,15:17:30.10:571,30,0	0/1:20,0:19:29.83:30,0,322	0/1:17,0:17:39.87:40,0,241	0/0:13,0:13:39.07:0,39,767	1/1:3,7:10:15.02:231,15,0	1/1:3,11:14:26.53:417,27,0	0/0:12,0:12:29.03:0,29,595	0/0:22,0:22:41.96:0,42,820	0/1:17,0:16:13.40:13,0,270	0/0:21,0:21:54.02:0,54,1027	1/1:3,15:17:40.68:404,41,0	1/1:0,20:20:53.73:628,54,0	1/1:2,15:17:21.07:366,21,0	1/1:2,19:21:41.93:612,42,0	1/1:1,21:22:11.45:146,11,0	0/1:2,20:22:1.81:194,0,2	1/1:2,21:23:26.98:457,27,0	0/1:24,0:22:13:13,0,429	0/0:28,0:26:10.31:0,10,612	0/0:7,0:7:17.77:0,18,142
chr10	16573928	.	TG	T	4299.61	PASS	AB=1.000;AC=41;AF=0.732;AN=56;BaseQRankSum=9.455;DP=506;FS=30.689;HRun=1;HaplotypeScore=115.4933;InbreedingCoeff=0.8525;MQ=57.26;MQ0=14;MQRankSum=-7.213;QD=12.15;ReadPosRankSum=-1.575;VQSLOD=1.6327;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:47.09:0,47,625	1/1:6,0:6:14.99:85,15,0	0/0:28,0:11:21.39:0,21,184	0/0:18,1:7:1.07:0,1,56	1/1:16,1:17:35.49:189,35,0	1/1:12,0:12:26.89:210,27,0	1/1:13,0:13:23.92:189,24,0	1/1:13,0:13:32.13:249,32,0	1/1:16,0:16:29.94:244,30,0	1/1:20,0:19:27.18:253,27,0	1/1:16,1:16:38.01:222,38,0	0/0:14,0:14:17.74:0,18,310	1/1:9,0:9:14.92:114,15,0	1/1:14,0:14:26.88:207,27,0	0/0:11,0:11:10.28:0,10,186	0/0:21,0:22:46.01:0,46,375	0/1:17,0:16:6.13:83,0,6	0/0:23,0:22:34.72:0,35,363	1/1:17,0:16:42.28:326,42,0	1/1:20,0:20:53.61:392,54,0	1/1:17,0:17:20.92:165,21,0	1/1:21,0:21:41.77:316,42,0	1/1:22,0:22:12.31:90,12,0	1/1:22,0:22:11.94:92,12,0	1/1:23,0:23:26.89:210,27,0	1/1:23,1:22:40.41:317,40,0	1/1:26,1:25:53.38:268,53,0	1/1:7,0:7:14.90:80,15,0
chr10	16573997	.	T	TTTTTG	5741.01	PASS	AB=0.639;AC=15;AF=0.268;AN=56;BaseQRankSum=-1.150;DP=607;FS=1.012;HRun=0;HaplotypeScore=154.0077;InbreedingCoeff=0.8551;MQ=52.23;MQ0=12;MQRankSum=-8.969;QD=38.79;ReadPosRankSum=2.567;VQSLOD=4.8415;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:80.08:0,80,1417	1/1:0,4:5:6.02:170,6,0	0/0:34,0:10:6.02:0,6,93	0/0:51,0:11:11.77:0,12,148	1/1:5,12:17:30.10:725,30,0	0/0:17,0:16:33.11:0,33,608	0/0:17,0:17:36.11:0,36,631	0/0:24,0:24:38.17:0,38,683	0/0:14,0:14:24.07:0,24,414	1/1:9,21:30:57.19:1554,57,0	1/1:5,12:17:30.10:837,30,0	0/0:13,0:12:24.08:0,24,442	0/0:13,0:13:30.09:0,30,524	0/0:17,0:17:30.10:0,30,553	0/0:19,0:19:39.13:0,39,719	0/0:18,0:18:48.15:0,48,839	0/1:10,12:23:31.48:497,0,31	0/0:21,0:21:41.12:0,41,783	0/0:17,0:17:12.04:0,12,180	0/0:27,0:27:45.15:0,45,809	0/0:14,0:14:33.05:0,33,536	0/0:25,0:25:42.07:0,42,717	0/0:15,0:15:26.51:0,27,468	0/0:25,0:25:57.16:0,57,987	0/0:37,0:36:72.15:0,72,1250	1/1:10,15:25:45.14:1160,45,0	1/1:8,10:19:18.06:457,18,0	1/1:5,6:11:13.29:341,13,0
chr10	16575942	.	A	ATTT	10366.96	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=-0.588;DP=451;FS=7.291;HRun=10;HaplotypeScore=76.6324;InbreedingCoeff=0.9305;MQ=67.07;MQ0=1;MQRankSum=-0.379;QD=29.29;ReadPosRankSum=-0.867;VQSLOD=3.4565;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:45.09:0,45,547	1/1:3,0:9:17.33:129,17,0	0/0:15,0:13:20.44:0,20,188	0/0:4,0:3:2.59:0,3,10	1/1:4,0:26:39.20:316,39,0	1/1:2,12:16:36.12:662,36,0	1/1:5,13:22:51.17:940,51,0	1/1:5,15:21:51.15:936,51,0	1/1:3,7:11:21.07:404,21,0	1/1:4,0:14:29.91:249,30,0	1/1:2,0:29:74.72:599,75,0	0/0:11,0:11:33.10:0,33,401	1/1:4,9:14:33.11:599,33,0	1/1:3,13:16:39.13:750,39,0	0/0:15,0:15:36.10:0,36,435	0/0:14,0:15:39.03:0,39,456	1/1:8,0:37:69.63:564,70,0	0/0:17,0:17:39.09:0,39,474	1/1:11,12:27:48.08:784,48,0	1/1:0,7:9:27.07:447,27,0	1/1:3,8:11:12.04:212,12,0	1/1:2,7:10:24.06:407,24,0	1/1:2,10:13:21.07:404,21,0	1/1:2,12:14:33.11:635,33,0	1/1:0,11:11:30.10:576,30,0	1/1:2,0:20:51.96:404,52,0	1/1:3,0:19:5.44:261,5,0	1/1:0,0:4:11.95:92,12,0
chr10	16576273	.	CATAAAATAAAATAAA	C	4326.93	PASS	AB=0.619;AC=26;AF=0.520;AN=50;BaseQRankSum=7.088;DP=310;FS=24.963;HRun=0;HaplotypeScore=138.4045;InbreedingCoeff=0.6593;MQ=75.09;MQ0=4;MQRankSum=-6.890;QD=33.03;ReadPosRankSum=2.637;VQSLOD=2.0815;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:33.11:0,33,2042	1/1:3,1:4:3.01:126,3,0	0/0:19,0:10:6.01:0,6,66	0/0:33,0:17:15.48:0,15,252	1/1:2,10:12:18.06:645,18,0	1/1:2,0:10:9.33:25,9,0	1/1:3,0:5:1.55:4,2,0	0/0:9,0:16:13.75:0,14,262	1/1:2,0:8:7.77:21,8,0	1/1:1,10:11:23.81:983,24,0	1/1:6,7:13:17.98:618,18,0	0/0:6,0:6:12.04:0,12,630	0/1:7,0:14:0.92:1,0,157	1/1:3,0:8:8.59:25,9,0	0/0:7,0:7:6.02:0,6,432	0/0:11,0:11:12.04:0,12,834	./.	0/0:18,0:18:42.14:0,42,2659	0/0:12,0:14:6.81:0,7,137	0/0:3,0:3:3.01:0,3,50	0/0:7,0:7:8.97:0,9,74	1/1:5,0:7:1.55:4,2,0	./.	./.	0/1:2,0:8:4.68:5,0,66	1/1:2,10:12:27.05:820,27,0	1/1:7,10:17:24.08:1005,24,0	1/1:2,0:2:3.01:45,3,0
chr10	16576493	.	T	TA	4865.53	PASS	AC=40;AF=0.741;AN=54;BaseQRankSum=-2.770;DP=205;FS=0.000;HRun=7;HaplotypeScore=31.7731;InbreedingCoeff=0.8380;MQ=76.69;MQ0=0;MQRankSum=-3.258;QD=30.22;ReadPosRankSum=-0.078;VQSLOD=4.3438;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:8:18.03:0,18,174	1/1:2,5:7:15.05:181,15,0	0/0:6,0:6:15:0,15,135	0/0:7,0:7:17.81:0,18,150	1/1:1,2:3:6.90:74,7,0	1/1:1,8:9:24.07:290,24,0	1/1:0,6:6:9.03:109,9,0	1/1:6,25:31:75.19:889,75,0	1/1:0,3:3:9.03:109,9,0	1/1:1,7:8:21.06:253,21,0	1/1:1,3:4:9.03:109,9,0	0/0:5,0:5:14.96:0,15,133	1/1:0,3:3:6.02:73,6,0	1/1:0,2:2:6.02:72,6,0	0/0:3,0:3:9.01:0,9,87	0/0:5,0:5:11.55:0,12,115	1/1:1,18:19:51.16:616,51,0	0/0:10,0:10:25.85:0,26,237	1/1:0,12:12:36.11:435,36,0	1/1:0,2:2:6.02:72,6,0	1/1:5,3:8:12.02:133,12,0	./.	1/1:0,3:3:6.02:72,6,0	1/1:0,4:4:12.04:145,12,0	1/1:1,5:6:15.05:181,15,0	1/1:0,9:9:27.08:326,27,0	1/1:2,11:13:33.10:398,33,0	1/1:0,9:9:27.08:326,27,0
chr10	16577455	.	A	ACTG	5884.71	PASS	AC=40;AF=0.741;AN=54;BaseQRankSum=13.404;DP=317;FS=0.875;HRun=0;HaplotypeScore=171.3748;InbreedingCoeff=0.9158;MQ=99.35;MQ0=0;MQRankSum=-14.043;QD=41.74;ReadPosRankSum=3.398;VQSLOD=5.9578;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,144,2685	1/1:0,3:3:9.03:135,9,0	0/0:26,0:26:74.94:0,75,1135	0/0:16,0:16:48.09:0,48,713	1/1:0,10:10:23.39:324,23,0	1/1:2,10:12:36.12:582,36,0	1/1:1,9:10:30.10:457,30,0	1/1:1,0:1:3.01:53,3,0	1/1:0,17:17:51.17:779,51,0	1/1:2,4:6:18.06:310,18,0	1/1:1,3:4:9.03:162,9,0	0/0:19,0:19:57.20:0,57,1058	1/1:0,6:6:18.06:281,18,0	1/1:0,9:9:27.09:406,27,0	0/0:31,0:31:90.31:0,90,1679	0/0:19,0:19:54.19:0,54,1006	1/1:0,6:6:15.05:230,15,0	0/0:16,0:16:45.12:0,45,804	1/1:0,7:7:21.07:339,21,0	1/1:0,5:5:15.05:227,15,0	1/1:2,6:8:20.06:161,20,0	1/1:0,3:3:9.03:136,9,0	1/1:1,3:4:12.02:157,12,0	1/1:1,11:12:29.43:304,29,0	1/1:0,8:8:24.08:365,24,0	1/1:0,5:5:15.05:237,15,0	1/1:0,5:5:15.05:239,15,0	./.
chr10	16577456	.	A	AG	1235.38	PASS	AC=38;AF=0.704;AN=54;BaseQRankSum=14.082;DP=317;FS=1.397;HRun=0;HaplotypeScore=180.1095;InbreedingCoeff=0.8615;MQ=99.35;MQ0=0;MQRankSum=-13.857;QD=8.89;ReadPosRankSum=4.890;VQSLOD=3.9629;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,144,2013	1/1:0,3:3:8.17:35,8,0	0/0:26,0:26:63.20:0,63,811	0/0:16,0:16:44.34:0,44,526	1/1:0,10:10:8.47:53,8,0	1/1:2,10:12:32.17:151,32,0	1/1:1,9:10:24.47:107,24,0	0/0:1,0:1:0.47:0,0,1	1/1:0,17:17:46.66:207,47,0	1/1:2,4:6:12.11:58,12,0	1/1:1,3:4:6.99:25,7,0	0/0:20,0:20:57.18:0,57,782	1/1:0,6:6:15.05:65,15,0	1/1:0,9:9:23.82:99,24,0	0/0:31,0:31:93.30:0,93,1285	0/0:20,0:20:57.18:0,57,780	1/1:0,6:6:12.66:52,13,0	0/0:15,0:15:42.14:0,42,587	1/1:0,7:7:20.48:121,20,0	1/1:0,5:5:13.44:57,13,0	1/1:1,6:7:4.65:25,5,0	1/1:0,3:3:8.17:35,8,0	1/1:1,3:4:7.95:32,8,0	1/1:1,11:12:16.71:69,17,0	1/1:0,8:8:22.04:98,22,0	1/1:0,5:5:14.45:79,14,0	1/1:0,5:5:13.46:60,13,0	./.
chr10	16577458	.	T	TGTAGC	9680.28	PASS	AC=38;AF=0.731;AN=52;BaseQRankSum=14.680;DP=325;FS=0.000;HRun=0;HaplotypeScore=175.1209;InbreedingCoeff=0.9129;MQ=98.61;MQ0=0;MQRankSum=-14.502;QD=66.76;ReadPosRankSum=6.244;VQSLOD=5.5711;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,144,3352	1/1:0,3:3:9.03:244,9,0	0/0:24,0:24:69.19:0,69,1415	0/0:18,0:18:48.05:0,48,927	1/1:0,10:10:30.10:699,30,0	1/1:1,10:11:28.20:812,28,0	1/1:0,9:9:27.09:729,27,0	./.	1/1:0,17:17:51.18:1377,51,0	1/1:4,4:8:11.72:330,12,0	1/1:1,3:4:8.56:173,9,0	0/0:19,0:19:57.20:0,57,1304	1/1:0,6:6:18.06:482,18,0	1/1:3,7:10:30.08:735,30,0	0/0:33,0:33:96.31:0,96,2159	0/0:20,0:20:60.21:0,60,1359	1/1:0,6:6:15.05:405,15,0	0/0:15,0:15:45.15:0,45,1018	1/1:3,6:9:21.07:596,21,0	1/1:0,5:5:15.05:407,15,0	1/1:2,6:8:11:216,11,0	1/1:1,3:4:12.03:264,12,0	1/1:0,3:3:9.03:240,9,0	1/1:1,11:12:5.17:486,5,0	1/1:0,8:8:24.08:653,24,0	1/1:2,5:7:15.05:427,15,0	1/1:0,4:5:15.05:404,15,0	./.
chr10	16577460	.	GGGGCC	G	471.48	PASS	AB=1.000;AC=18;AF=0.346;AN=52;BaseQRankSum=7.279;DP=329;FS=5.384;HRun=0;HaplotypeScore=209.5912;InbreedingCoeff=0.5191;MQ=98.17;MQ0=0;MQRankSum=-5.603;QD=5.82;ReadPosRankSum=0.514;VQSLOD=2.3698;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,157,5073	0/0:3,0:3:0.66:0,1,1	0/0:23,0:23:66.23:0,66,2093	0/0:18,0:18:54.13:0,54,1568	1/1:10,0:10:11.69:165,12,0	1/1:11,0:11:2.38:21,2,0	0/0:10,0:10:7.86:0,8,16	./.	0/0:17,0:17:2.72:0,3,10	1/1:4,3:7:16.59:167,17,0	0/0:4,0:4:2.24:0,2,5	0/0:20,0:20:60.21:0,60,1895	0/0:6,0:6:5.48:0,5,19	0/1:8,0:10:2.24:2,0,12	0/0:33,0:33:99:0,99,3212	0/0:20,0:20:60.21:0,60,1994	0/0:6,0:6:2.76:0,3,8	0/0:16,0:16:48.16:0,48,1587	1/1:6,2:9:22.48:146,22,0	1/1:6,0:6:4.47:13,4,0	0/1:8,0:8:22.33:22,0,77	0/1:5,0:5:6.42:11,0,6	1/1:3,0:3:0.84:2,1,0	0/0:11,0:11:17.67:0,18,117	0/0:8,0:8:0.24:0,0,2	1/1:7,0:7:15.90:78,16,0	0/1:5,0:5:0.78:1,0,4	./.
chr10	16577461	.	G	GTCTGA	11343.71	PASS	AC=38;AF=0.704;AN=54;BaseQRankSum=14.751;DP=332;FS=1.363;HRun=0;HaplotypeScore=164.2669;InbreedingCoeff=0.8900;MQ=97.85;MQ0=0;MQRankSum=-14.542;QD=77.17;ReadPosRankSum=6.308;VQSLOD=6.1214;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,156,3402	1/1:0,3:3:9.03:282,9,0	0/0:23,0:23:66.22:0,66,1449	0/0:18,0:18:51.17:0,51,1059	1/1:0,9:10:30.10:860,30,0	1/1:1,10:11:30.10:946,30,0	1/1:2,9:11:27.09:841,27,0	0/0:1,0:1:0:0,0,0	1/1:0,17:17:51.18:1600,51,0	1/1:3,4:7:12.51:381,13,0	1/1:1,3:4:6.01:185,6,0	0/0:20,0:20:60.17:0,60,1281	1/1:0,6:6:18.06:559,18,0	1/1:3,7:10:30.10:901,30,0	0/0:33,0:33:96.33:0,96,2216	0/0:20,0:20:60.21:0,60,1396	1/1:0,6:6:15.05:464,15,0	0/0:16,0:16:48.15:0,48,1068	1/1:2,6:9:21.54:665,22,0	1/1:1,5:6:15.05:471,15,0	1/1:2,6:8:11.03:253,11,0	1/1:2,3:5:15.03:373,15,0	1/1:0,3:3:9.03:279,9,0	1/1:0,11:11:6.51:554,7,0	1/1:0,8:8:24.08:753,24,0	1/1:2,5:7:18.03:505,18,0	1/1:0,5:5:15.05:472,15,0	./.
chr10	16577682	.	CAAAT	C	14397.29	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=13.302;DP=680;FS=11.592;HRun=0;HaplotypeScore=117.1084;InbreedingCoeff=0.9915;MQ=77.78;MQ0=4;MQRankSum=-2.129;QD=31.64;ReadPosRankSum=2.768;VQSLOD=4.2290;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:58:99:0,174,3646	1/1:0,13:13:23.47:295,23,0	0/0:34,0:29:56.62:0,57,954	0/0:32,0:30:55.27:0,55,942	1/1:0,20:20:53.55:717,54,0	1/1:1,15:16:18.06:340,18,0	1/1:1,18:19:27.09:508,27,0	1/1:1,18:19:54.05:719,54,0	1/1:0,21:21:27.09:511,27,0	1/1:4,18:22:48.07:710,48,0	1/1:2,15:17:44.52:610,45,0	0/0:26,0:26:78.21:0,78,1814	1/1:0,18:18:33.11:623,33,0	1/1:0,26:26:48.16:908,48,0	0/0:22,0:22:66.14:0,66,1398	0/0:22,0:22:63.14:0,63,1357	1/1:2,42:43:69.24:1289,69,0	0/0:31,0:31:90.16:0,90,1885	1/1:0,23:23:68.92:712,69,0	1/1:1,12:13:35.97:592,36,0	1/1:0,33:33:42.14:796,42,0	1/1:2,21:22:53.32:739,53,0	1/1:0,17:17:26.31:470,26,0	1/1:7,31:36:59.57:1088,60,0	1/1:1,18:19:24.08:455,24,0	1/1:1,28:29:81.16:1353,81,0	1/1:1,19:20:38.41:735,38,0	1/1:0,5:5:12.04:227,12,0
chr10	16586484	.	A	AAG	988.10	PASS	AB=0.833;AC=32;AF=0.615;AN=52;BaseQRankSum=-1.150;DP=505;FS=13.514;HRun=0;HaplotypeScore=79.9876;InbreedingCoeff=0.4871;MQ=64.00;MQ0=14;MQRankSum=-0.093;QD=3.08;ReadPosRankSum=0.510;VQSLOD=1.0378;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:22,8:31:35.48:35,0,48	0/0:10,0:10:2.85:0,3,32	./.	0/1:25,0:10:0:0,0,0	0/0:19,0:19:11.96:0,12,105	1/1:9,6:15:3.01:45,3,0	1/1:11,4:16:8.06:85,8,0	1/1:34,0:32:11.41:69,11,0	0/1:16,7:23:23.18:35,0,23	0/0:23,0:23:12.28:0,12,111	0/0:18,0:18:17.86:0,18,166	1/1:14,4:18:9.03:134,9,0	1/1:10,0:10:9.48:108,9,0	1/1:12,1:13:7.83:75,8,0	1/1:20,1:22:9:90,9,0	1/1:13,0:11:3:25,3,0	0/0:28,0:30:17.70:0,18,156	0/0:13,0:18:8.52:0,9,42	1/1:18,0:17:11.95:110,12,0	1/1:12,0:12:3.01:41,3,0	1/1:12,0:11:2.04:6,2,0	1/1:10,0:10:5.99:50,6,0	1/1:10,7:17:5.77:63,6,0	1/1:6,0:16:18:157,18,0	0/1:11,4:14:35.30:35,0,56	0/0:20,0:21:11.85:0,12,98	0/0:21,0:21:17.87:0,18,174	./.
chr10	16587851	.	TAATA	T	1650.79	PASS	AC=34;AF=0.850;AN=40;BaseQRankSum=5.061;DP=260;FS=1.141;HRun=0;HaplotypeScore=38.6519;InbreedingCoeff=0.4885;MQ=62.05;MQ0=2;MQRankSum=0.196;QD=9.22;ReadPosRankSum=0.588;VQSLOD=1.8976;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:21.07:0,21,465	1/1:5,1:6:3.01:46,3,0	./.	./.	1/1:7,2:9:6.02:93,6,0	1/1:1,4:5:6.02:92,6,0	1/1:7,0:7:2.99:23,3,0	1/1:34,0:31:3.01:39,3,0	1/1:5,2:7:3.01:46,3,0	1/1:5,3:8:9.03:140,9,0	./.	0/0:7,0:7:12.04:0,12,282	1/1:3,2:5:3.01:46,3,0	./.	./.	./.	1/1:14,13:27:24.08:372,24,0	0/0:15,0:15:18.06:0,18,422	1/1:10,3:13:9.03:139,9,0	1/1:7,2:9:6.02:93,6,0	./.	./.	1/1:5,1:6:3.01:46,3,0	1/1:4,2:6:6.02:93,6,0	1/1:5,6:11:12.04:186,12,0	1/1:2,3:5:9.03:139,9,0	1/1:5,1:6:3.01:46,3,0	1/1:7,8:15:9.03:137,9,0
chr10	16591148	.	ACGTC	A	24841.75	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=12.714;DP=719;FS=4.656;HRun=0;HaplotypeScore=133.8025;InbreedingCoeff=0.9999;MQ=77.83;MQ0=2;MQRankSum=-9.155;QD=45.66;ReadPosRankSum=2.242;VQSLOD=5.6142;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:78.25:0,78,1965	1/1:0,13:13:36.07:645,36,0	0/0:22,0:22:62.90:0,63,1490	0/0:16,0:16:38.27:0,38,957	1/1:2,21:23:47.82:903,48,0	1/1:0,25:25:63.22:1191,63,0	1/1:4,34:38:78.27:1479,78,0	1/1:4,31:35:93.29:1676,93,0	1/1:0,26:26:57.20:1077,57,0	1/1:3,29:31:81.27:1507,81,0	1/1:0,20:20:51.17:968,51,0	0/0:29,0:29:81.28:0,81,2165	1/1:0,27:27:81.28:1534,81,0	1/1:2,24:26:63.22:1183,63,0	0/0:28,0:28:84.27:0,84,2189	0/0:20,0:20:60.21:0,60,1619	1/1:1,26:27:63.22:1196,63,0	0/0:15,0:15:36.12:0,36,972	1/1:0,17:17:51.09:861,51,0	1/1:2,20:22:57.20:1081,57,0	1/1:2,27:29:60.15:1108,60,0	1/1:1,22:21:54.19:1014,54,0	1/1:0,24:24:60.21:1121,60,0	1/1:2,26:28:63.22:1188,63,0	1/1:2,24:26:54.19:1021,54,0	1/1:2,35:37:99:1931,105,0	1/1:2,23:25:60.21:1135,60,0	1/1:1,20:21:54.19:1024,54,0
chr10	16593675	.	TA	T	455.09	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.450;DP=595;FS=2.798;HRun=9;HaplotypeScore=58.6657;InbreedingCoeff=0.9950;MQ=71.19;MQ0=0;MQRankSum=-2.619;QD=17.50;ReadPosRankSum=1.293;VQSLOD=3.8479;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,132,1512	0/0:12,0:12:30.06:0,30,333	0/0:15,0:12:27.06:0,27,292	0/0:8,0:8:21.05:0,21,225	0/0:43,0:43:99:0,117,1347	0/0:12,0:12:33.10:0,33,381	0/0:26,0:26:66.18:0,66,746	0/0:29,1:30:59.78:0,60,924	0/0:14,0:14:39.12:0,39,450	0/0:24,0:24:63.19:0,63,725	0/0:22,0:22:60.16:0,60,676	0/0:15,0:15:39.12:0,39,450	0/0:15,0:15:45.11:0,45,503	0/0:19,0:19:48.14:0,48,554	0/0:24,0:24:72.20:0,72,821	1/1:1,11:12:27.01:247,27,0	0/0:21,0:21:54.16:0,54,623	1/1:2,12:14:36.02:329,36,0	0/0:21,0:21:51.15:0,51,589	0/0:38,0:38:99:0,102,1169	0/0:12,0:12:33.10:0,33,381	0/0:23,0:23:63.17:0,63,708	0/0:23,0:23:66.19:0,66,753	0/0:17,0:17:48.14:0,48,554	0/0:27,0:27:75.21:0,75,856	0/0:22,0:22:57.16:0,57,650	0/0:24,0:24:60.18:0,60,692	0/0:15,1:16:23.73:0,24,495
chr10	16594078	.	AC	A	267.09	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.783;DP=644;FS=0.000;HRun=2;HaplotypeScore=86.2158;InbreedingCoeff=0.9147;MQ=79.52;MQ0=0;MQRankSum=-6.194;QD=9.21;ReadPosRankSum=2.576;VQSLOD=1.3309;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,120,1735	0/0:8,0:8:24.08:0,24,358	0/0:18,0:19:33.57:0,34,461	0/0:24,0:24:29.72:0,30,457	0/0:29,0:29:87.28:0,87,1282	0/0:26,0:26:78.26:0,78,1168	0/0:22,0:22:66.21:0,66,968	0/0:36,0:35:99:0,108,1592	0/0:19,0:19:57.19:0,57,849	0/0:28,0:28:84.28:0,84,1257	0/0:18,0:18:54.17:0,54,787	0/0:17,0:17:51.17:0,51,764	0/0:21,0:21:63.17:0,63,883	0/0:25,0:25:75.25:0,75,1122	0/0:31,0:31:90.30:0,90,1330	1/1:5,16:21:47.74:350,48,0	0/0:19,0:19:57.16:0,57,830	1/1:6,2:8:3.88:26,4,0	0/0:22,0:22:63.20:0,63,925	0/0:26,0:26:75.25:0,75,1123	0/0:31,0:31:90.27:0,90,1308	0/0:26,0:26:75.25:0,75,1124	0/0:21,0:21:60.18:0,60,874	0/0:21,0:21:63.21:0,63,944	0/0:16,0:16:45.13:0,45,649	0/0:27,0:27:81.27:0,81,1214	0/0:29,0:29:87.28:0,87,1273	0/0:13,0:13:39.13:0,39,584
chr10	16594081	.	ATGGTTCCCCCCCCTCTCCCCGGG	A	3083.46	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.328;DP=644;FS=0.874;HRun=0;HaplotypeScore=377.5448;InbreedingCoeff=0.9424;MQ=78.54;MQ0=0;MQRankSum=-6.538;QD=171.30;ReadPosRankSum=3.334;VQSLOD=2.9229;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,129,11803	0/0:8,0:8:24.08:0,24,1970	0/0:19,0:19:45.66:0,46,2451	0/0:24,0:25:65.74:0,66,2126	0/0:29,0:29:87.30:0,87,8829	0/0:27,0:27:81.28:0,81,8316	0/0:23,0:23:69.24:0,69,6973	0/0:37,0:36:99:0,111,7430	0/0:20,0:20:60.21:0,60,5968	0/0:30,0:30:90.31:0,90,9157	0/0:20,0:20:60.21:0,60,5527	0/0:17,0:17:51.16:0,51,4792	0/0:19,0:19:57.20:0,57,5535	0/0:26,0:26:78.27:0,78,7919	0/0:30,0:30:90.31:0,90,8646	1/1:0,16:16:48.16:2859,48,0	0/0:19,0:19:57.20:0,57,5968	1/1:0,2:2:6.02:336,6,0	0/0:21,0:21:63.21:0,63,4422	0/0:27,0:27:81.28:0,81,8338	0/0:29,0:29:87.30:0,87,9061	0/0:28,0:28:81.28:0,81,8108	0/0:22,0:22:66.23:0,66,6467	0/0:22,0:22:66.21:0,66,6258	0/0:15,0:15:45.15:0,45,4565	0/0:28,0:28:84.29:0,84,8163	0/0:28,0:28:84.27:0,84,8096	0/0:13,0:13:39.13:0,39,3797
chr10	16594381	.	A	AC	1575.23	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.999;DP=590;FS=8.082;HRun=0;HaplotypeScore=58.5909;InbreedingCoeff=0.9989;MQ=84.98;MQ0=1;MQRankSum=-1.969;QD=43.76;ReadPosRankSum=0.440;VQSLOD=3.7579;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:96.32:0,96,1340	0/0:8,0:8:24.08:0,24,335	0/0:22,0:23:50.56:0,51,810	0/0:17,0:17:50.64:0,51,651	0/0:23,0:23:69.22:0,69,948	0/0:26,0:26:75.25:0,75,1047	0/0:15,0:15:45.12:0,45,594	0/0:30,0:30:87.28:0,87,1188	0/0:23,0:23:69.20:0,69,929	0/0:39,0:38:99:0,111,1551	0/0:16,0:16:48.16:0,48,671	0/0:17,0:17:51.16:0,51,696	0/0:25,0:25:72.24:0,72,1007	0/0:18,0:18:54.17:0,54,737	0/0:28,0:28:84.28:0,84,1174	1/1:2,18:20:60.19:930,60,0	0/0:24,0:24:72.24:0,72,1007	1/1:0,16:16:48.16:767,48,0	0/0:14,0:14:42.13:0,42,570	0/0:19,0:19:57.19:0,57,797	0/0:22,0:22:63.21:0,63,880	0/0:21,0:21:63.18:0,63,844	0/0:20,0:20:60.20:0,60,828	0/0:15,0:15:45.15:0,45,629	0/0:27,0:27:81.26:0,81,1114	0/0:15,0:15:42.14:0,42,588	0/0:23,0:23:66.22:0,66,921	0/0:13,0:13:39.13:0,39,545
chr10	16594469	.	TA	T	994.39	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=10.246;DP=620;FS=0.594;HRun=8;HaplotypeScore=58.8084;InbreedingCoeff=0.9719;MQ=67.87;MQ0=0;MQRankSum=-0.703;QD=22.10;ReadPosRankSum=0.742;VQSLOD=3.9519;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:81.22:0,81,954	0/0:4,0:4:12.04:0,12,145	0/0:10,0:10:24.07:0,24,290	0/0:6,0:6:15.04:0,15,176	0/0:43,0:43:99:0,123,1474	0/0:27,0:27:81.25:0,81,979	0/0:13,0:13:39.12:0,39,471	0/0:38,0:38:93.29:0,93,1124	0/0:16,0:16:45.14:0,45,544	0/0:27,0:27:75.23:0,75,906	0/0:35,0:35:99:0,99,1196	0/0:22,0:22:63.14:0,63,744	0/0:18,0:18:51.16:0,51,616	0/0:21,0:21:54.17:0,54,652	0/0:25,0:25:63.18:0,63,750	1/1:3,22:25:29.88:572,30,0	0/0:21,0:21:54.17:0,54,652	1/1:1,19:20:57.08:544,57,0	0/0:8,0:8:24.07:0,24,290	0/0:31,1:32:61.30:0,61,1022	0/0:10,0:10:30.09:0,30,362	0/0:20,0:20:54.17:0,54,650	0/0:24,0:24:66.20:0,66,797	0/0:7,0:7:21.06:0,21,254	0/0:37,0:37:99:0,105,1246	0/0:31,0:31:84.26:0,84,1015	0/0:34,0:34:99:0,99,1196	0/0:17,0:17:45.14:0,45,544
chr10	16594936	.	C	CA	3020.23	PASS	AB=0.858;AC=24;AF=0.429;AN=56;BaseQRankSum=-3.292;DP=677;FS=5.185;HRun=11;HaplotypeScore=120.8649;InbreedingCoeff=0.6034;MQ=60.38;MQ0=18;MQRankSum=0.356;QD=8.53;ReadPosRankSum=-1.423;VQSLOD=2.1366;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:31.41:0,31,359	0/0:10,0:10:22.43:0,22,161	0/0:52,0:14:0.34:0,0,50	0/1:43,0:16:7:7,0,65	0/1:20,2:23:21.78:22,0,309	0/0:12,0:12:11.95:0,12,129	0/0:14,0:14:33.09:0,33,237	1/1:11,18:28:30.72:470,31,0	1/1:11,6:17:0.19:258,0,0	0/0:34,0:33:71.57:0,72,546	0/0:27,1:28:25.97:0,26,349	0/0:23,0:23:50.96:0,51,386	1/1:9,10:19:30.14:257,30,0	0/1:8,12:20:5.10:117,0,5	0/0:24,0:24:61.57:0,62,447	0/0:13,0:13:19.49:0,19,59	0/1:30,3:33:54.73:55,0,379	0/0:14,0:14:15.22:0,15,53	1/1:14,12:26:18.84:296,19,0	1/1:28,10:38:6.40:490,6,0	1/1:6,6:10:21.04:213,21,0	1/1:9,8:14:2.98:171,3,0	1/1:10,16:26:20.74:314,21,0	1/1:4,15:19:18.04:183,18,0	1/1:11,19:30:18.58:367,19,0	0/0:23,1:23:9.23:0,9,343	0/0:23,0:22:28.37:0,28,384	0/0:22,0:23:11.65:0,12,291
chr10	16594942	.	AAAAAAC	A	864.13	PASS	AB=1.000;AC=6;AF=0.107;AN=56;BaseQRankSum=6.678;DP=688;FS=5.301;HRun=0;HaplotypeScore=184.1402;InbreedingCoeff=0.6270;MQ=60.77;MQ0=17;MQRankSum=-5.429;QD=5.96;ReadPosRankSum=-0.658;VQSLOD=1.7660;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:74.39:0,74,1825	0/0:10,0:10:27.09:0,27,803	0/1:64,0:18:17.81:18,0,289	0/1:53,0:17:25.03:25,0,233	0/0:25,0:24:70.10:0,70,1935	0/0:11,0:11:29.95:0,30,772	0/0:13,0:13:39.13:0,39,1015	0/0:28,0:28:71.12:0,71,1286	0/0:17,0:17:45.12:0,45,982	0/0:30,0:29:65.03:0,65,2274	0/0:27,0:27:73.62:0,74,1923	0/0:24,0:24:64.22:0,64,1613	0/0:19,0:19:29.34:0,29,704	0/0:19,0:19:24.50:0,25,501	0/0:25,0:25:72.24:0,72,1957	1/1:8,5:13:39.05:519,39,0	0/0:35,0:35:99:0,100,2515	1/1:10,4:14:37.27:438,37,0	0/0:26,0:24:49.57:0,50,959	0/0:32,0:32:83.98:0,84,1894	0/0:12,0:10:27.04:0,27,596	0/0:14,0:11:29.86:0,30,640	0/0:24,0:24:44.72:0,45,986	0/0:20,0:20:22.47:0,22,501	0/0:31,0:31:63.05:0,63,1382	0/0:25,0:23:69.22:0,69,1911	0/0:24,0:22:63.18:0,63,1730	0/0:23,0:23:57.20:0,57,1719
chr10	16594969	.	CA	C	200.97	PASS	AB=0.903;AC=16;AF=0.286;AN=56;BaseQRankSum=3.324;DP=659;FS=1.599;HRun=17;HaplotypeScore=130.9602;InbreedingCoeff=-0.0611;MQ=63.66;MQ0=11;MQRankSum=-1.880;QD=0.74;ReadPosRankSum=0.625;VQSLOD=-0.2394;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:19,6:26:22.77:23,0,256	0/0:8,2:11:1.03:0,1,93	0/0:77,1:24:6.53:0,7,106	0/0:55,0:22:7.58:0,8,96	0/0:26,1:30:15.86:0,16,292	0/0:12,0:12:5.30:0,5,124	0/1:10,0:10:1.97:2,0,128	0/1:17,0:18:1.93:2,0,58	0/0:14,0:16:28.76:0,29,189	0/0:18,1:21:15.69:0,16,190	0/0:23,4:30:7.18:0,7,239	0/0:15,0:15:24.51:0,25,181	0/1:14,2:18:50.90:51,0,64	0/1:18,0:18:5.55:6,0,110	0/1:17,4:22:11.14:11,0,215	1/1:6,1:16:21.35:70,21,0	0/0:31,1:35:10.83:0,11,322	1/1:10,1:18:16.06:47,16,0	0/0:17,1:18:19.35:0,19,237	0/0:24,1:28:37.65:0,38,326	0/0:9,1:10:7.08:0,7,141	0/1:10,0:11:11.24:11,0,92	0/1:16,3:21:21.61:22,0,156	0/1:17,1:17:15.73:16,0,59	0/1:19,4:25:45.28:45,0,117	0/1:16,6:23:44.82:45,0,156	0/0:22,3:25:21.92:0,22,242	0/1:22,1:25:7.53:8,0,175
chr10	16595530	.	AGGTTGG	A	1175.56	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=4.973;DP=487;FS=20.981;HRun=0;HaplotypeScore=108.3684;InbreedingCoeff=0.9894;MQ=72.50;MQ0=0;MQRankSum=-7.245;QD=33.59;ReadPosRankSum=3.717;VQSLOD=2.0147;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:78.23:0,78,1910	0/0:8,0:8:18.03:0,18,343	0/0:18,0:18:50.75:0,51,1047	0/0:16,0:15:32.96:0,33,610	0/0:17,0:17:45.14:0,45,938	0/0:18,0:18:48.63:0,49,1188	0/0:18,0:18:44.76:0,45,1107	0/0:16,0:16:39.04:0,39,627	0/0:14,0:14:42.13:0,42,1051	0/0:20,0:20:57.19:0,57,1461	0/0:13,0:13:39.13:0,39,891	0/0:22,0:22:66.20:0,66,1682	0/0:19,0:19:57.17:0,57,1402	0/0:22,0:22:63.20:0,63,1423	0/0:20,0:20:57.16:0,57,1501	1/1:1,17:18:39.08:863,39,0	0/0:34,0:34:97.19:0,97,2725	1/1:1,16:17:18.53:432,19,0	0/0:17,0:17:48.13:0,48,1044	0/0:13,0:13:36.12:0,36,861	0/0:15,0:15:42.14:0,42,1064	0/0:20,0:20:48.96:0,49,1099	0/0:11,0:11:30.10:0,30,721	0/0:18,0:18:51.14:0,51,1322	0/0:18,0:18:49.94:0,50,1294	0/0:19,0:19:51.17:0,51,1203	0/0:9,0:9:24.08:0,24,704	0/0:9,0:9:24.08:0,24,593
chr10	16597321	.	CG	C	963.41	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.537;DP=550;FS=9.233;HRun=2;HaplotypeScore=53.6232;InbreedingCoeff=0.9988;MQ=88.26;MQ0=0;MQRankSum=-2.433;QD=32.11;ReadPosRankSum=2.424;VQSLOD=2.8785;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,120,1767	0/0:10,0:10:30.10:0,30,448	0/0:12,0:12:36.12:0,36,535	0/0:29,0:29:81.12:0,81,1097	0/0:25,0:25:66.07:0,66,879	0/0:19,0:19:51.17:0,51,762	0/0:27,0:27:81.15:0,81,1101	0/0:22,0:22:66.21:0,66,961	0/0:18,0:18:54.18:0,54,803	0/0:26,0:26:75.21:0,75,1082	0/0:17,0:17:51.13:0,51,719	0/0:18,0:18:54.18:0,54,805	0/0:14,0:14:42.14:0,42,623	0/0:17,0:17:51.16:0,51,741	0/0:9,0:9:27.08:0,27,385	1/1:0,15:15:45.15:580,45,0	0/0:34,0:34:99:0,99,1456	1/1:0,15:15:39.13:505,39,0	0/0:15,0:15:45.12:0,45,633	0/0:14,0:14:36.11:0,36,519	0/0:30,0:30:90.28:0,90,1306	0/0:18,0:18:51.12:0,51,715	0/0:13,0:13:33.11:0,33,490	0/0:24,0:24:69.22:0,69,1012	0/0:15,0:15:45.15:0,45,672	0/0:25,0:24:72.24:0,72,1071	0/0:14,0:14:42.11:0,42,587	0/0:14,0:14:42.14:0,42,627
chr10	16599043	.	G	GTA	68.71	PASS	AB=0.571;AC=1;AF=0.018;AN=56;BaseQRankSum=3.357;DP=578;FS=2.000;HRun=0;HaplotypeScore=76.3357;InbreedingCoeff=0.3356;MQ=65.23;MQ0=3;MQRankSum=-1.722;QD=8.59;ReadPosRankSum=1.867;VQSLOD=2.9919;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:39:99:0,99,1419	0/0:8,0:8:24.08:0,24,362	0/0:15,0:12:16.23:0,16,280	0/0:17,0:13:24.03:0,24,324	0/0:28,0:28:78.24:0,78,1157	0/0:21,0:21:54.17:0,54,800	0/0:13,0:13:35.87:0,36,482	0/0:41,0:41:99:0,116,1645	0/0:20,0:20:54.12:0,54,737	0/0:20,0:20:60.19:0,60,875	0/0:21,0:21:57.18:0,57,844	0/0:14,0:14:42.07:0,42,590	0/0:17,0:17:51.14:0,51,734	0/0:20,0:20:60.19:0,60,884	0/0:23,0:23:63.17:0,63,896	0/0:2,4:6:3.01:0,3,44	0/0:13,0:13:39.10:0,39,563	0/1:2,6:8:3.79:143,0,4	0/0:20,0:20:60.14:0,60,799	0/0:28,0:28:84.18:0,84,1201	0/0:22,0:22:63.18:0,63,901	0/0:22,0:22:63.19:0,63,916	0/0:18,0:18:53.99:0,54,764	0/0:27,0:27:75.04:0,75,1134	0/0:23,0:23:63.18:0,63,902	0/0:24,0:24:69.22:0,69,1026	0/0:29,0:28:87.26:0,87,1257	0/0:20,0:20:59.96:0,60,758
chr10	16599849	.	ACTCTCTCT	A	1087.11	PASS	AB=0.966;AC=16;AF=0.308;AN=52;BaseQRankSum=1.193;DP=604;FS=36.929;HRun=0;HaplotypeScore=143.1902;InbreedingCoeff=-0.1237;MQ=78.48;MQ0=24;MQRankSum=0.754;QD=4.42;ReadPosRankSum=0.805;VQSLOD=1.3373;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:27:17.35:390,0,17	1/1:8,0:8:1.25:3,1,0	./.	0/0:56,0:30:0.47:0,0,1	1/1:13,0:13:6.02:98,6,0	0/1:16,0:14:30.30:30,0,78	0/0:24,0:22:9.48:0,9,176	0/0:24,0:24:7.79:0,8,93	0/0:9,0:9:5.28:0,5,30	0/1:18,3:21:50.54:115,0,51	1/1:12,1:13:0.89:2,1,0	0/0:21,0:21:8.69:0,9,216	0/1:20,0:20:20.52:21,0,261	0/0:20,0:18:12.04:0,12,429	0/0:20,6:24:3.43:0,3,10	0/0:18,0:18:12.02:0,12,215	0/1:13,0:12:18.82:89,0,19	0/0:17,0:17:12.04:0,12,278	0/0:19,0:17:5.03:0,5,31	0/0:32,0:32:3.01:0,3,76	0/1:26,0:21:50.49:76,0,50	0/0:18,0:18:2.87:0,3,55	./.	0/1:30,0:30:10.89:11,0,161	0/1:21,0:21:19.27:97,0,19	0/1:17,3:19:17.63:135,0,18	0/1:17,0:18:8.96:156,0,9	0/0:22,0:22:0.89:0,1,2
chr10	16599895	.	T	TCACA	314.84	PASS	AB=0.956;AC=6;AF=0.107;AN=56;BaseQRankSum=3.615;DP=468;FS=0.000;HRun=0;HaplotypeScore=101.4251;InbreedingCoeff=-0.1681;MQ=51.80;MQ0=38;MQRankSum=1.314;QD=2.39;ReadPosRankSum=-0.868;VQSLOD=1.8041;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:28:33.74:34,0,438	0/0:5,0:5:3.48:0,3,51	0/0:12,0:3:3.01:0,3,52	0/0:25,0:8:2.21:0,2,93	0/0:8,0:7:16.34:0,16,212	0/0:16,0:14:32.77:0,33,462	0/0:27,0:25:40.37:0,40,710	0/0:22,0:21:55.11:0,55,746	0/1:10,0:9:4.53:5,0,182	0/0:14,0:13:30.15:0,30,352	0/0:10,0:10:12.04:0,12,198	0/0:15,0:15:14.52:0,15,228	0/0:21,0:21:32.83:0,33,575	0/0:19,0:17:24.55:0,25,375	0/0:22,0:20:33.66:0,34,478	0/1:21,0:21:88.13:256,0,88	0/1:21,0:20:22.81:23,0,479	0/1:9,5:13:99:102,0,110	0/0:9,0:8:1.10:0,1,278	0/0:7,0:6:5.70:0,6,52	0/0:34,0:28:32.42:0,32,753	0/0:8,0:7:2.97:0,3,20	0/0:12,0:12:21.06:0,21,321	0/1:38,0:36:11.05:11,0,139	0/0:13,0:12:9.07:0,9,334	0/0:18,0:16:45.29:0,45,591	0/0:14,0:14:16.42:0,16,128	0/0:5,0:4:6.02:0,6,99
chr10	16599897	.	TCTCA	T	3164.88	PASS	AB=0.920;AC=39;AF=0.696;AN=56;BaseQRankSum=-1.723;DP=485;FS=34.785;HRun=0;HaplotypeScore=85.8370;InbreedingCoeff=0.2841;MQ=51.75;MQ0=39;MQRankSum=1.384;QD=7.83;ReadPosRankSum=-0.103;VQSLOD=0.1230;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:29:99:149,0,119	1/1:6,0:6:11.53:74,12,0	0/0:18,0:6:7.97:0,8,73	0/0:27,0:9:20.49:0,20,146	1/1:9,0:8:23.88:192,24,0	0/1:17,0:15:32.34:32,0,185	0/1:27,0:25:3.79:4,0,273	1/1:23,0:22:20.54:206,21,0	1/1:9,0:8:14.72:117,15,0	0/1:14,0:13:4.08:125,0,4	1/1:10,0:10:2.58:73,3,0	0/0:15,0:15:20.83:0,21,160	1/1:20,0:20:18.63:275,19,0	0/1:18,0:16:83.53:84,0,87	1/1:23,0:21:38.70:311,39,0	0/0:21,0:21:10.76:0,11,228	1/1:22,0:21:32.12:304,32,0	0/1:14,0:13:0.10:0,0,187	1/1:11,0:10:14.89:143,15,0	1/1:8,0:7:5.32:50,5,0	1/1:34,0:28:33.84:439,34,0	0/1:5,4:8:0:0,0,0	1/1:13,0:13:1:146,1,0	0/1:11,27:36:32.94:50,0,33	1/1:13,0:12:5.13:155,5,0	1/1:18,0:16:35.74:287,36,0	1/1:14,0:14:14.24:101,14,0	0/1:5,0:4:18.56:19,0,19
chr10	16599899	.	TCA	T	2516.29	PASS	AB=1.000;AC=35;AF=0.648;AN=54;BaseQRankSum=-3.644;DP=494;FS=13.542;HRun=0;HaplotypeScore=78.0626;InbreedingCoeff=0.4645;MQ=51.61;MQ0=40;MQRankSum=2.482;QD=7.72;ReadPosRankSum=-0.059;VQSLOD=2.1505;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:4.07:0,4,157	1/1:6,0:6:8.60:53,9,0	0/0:22,0:6:7.97:0,8,73	0/0:28,0:9:20.12:0,20,142	1/1:9,0:8:20.85:162,21,0	0/1:17,0:15:19.34:19,0,146	0/0:27,0:25:16.47:0,16,292	1/1:25,0:24:6.92:217,7,0	1/1:9,0:8:11.98:97,12,0	0/1:15,0:14:5.08:126,0,5	1/1:10,0:10:2.58:73,3,0	0/0:16,0:16:4.93:0,5,139	1/1:20,0:20:26.84:200,27,0	1/1:18,0:16:17.22:119,17,0	1/1:23,0:21:32.57:271,33,0	0/0:21,0:21:26.92:0,27,229	1/1:21,0:20:23.90:250,24,0	0/0:16,0:15:20.96:0,21,200	1/1:11,0:10:11.70:116,12,0	1/1:8,0:7:8.60:76,9,0	1/1:34,0:28:22.34:336,22,0	./.	1/1:13,0:13:1:146,1,0	0/1:38,0:36:17.97:21,0,18	0/1:11,0:10:2.55:115,0,3	1/1:18,0:16:26.98:237,27,0	1/1:7,8:15:5.55:44,6,0	0/1:5,0:4:18.56:19,0,19
chr10	16600471	.	T	TAGACAGACAGACAGAC	31692.25	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-1.747;DP=824;FS=10.644;HRun=0;HaplotypeScore=326.9201;InbreedingCoeff=0.9403;MQ=53.80;MQ0=4;MQRankSum=-12.903;QD=52.73;ReadPosRankSum=-4.153;VQSLOD=2.4752;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:96.33:0,96,3899	1/1:8,1:10:11.96:624,12,0	0/0:29,0:20:26.84:0,27,543	0/0:25,0:21:23.53:0,24,558	1/1:25,5:33:9.92:643,10,0	0/0:27,0:27:63.18:0,63,2341	0/0:23,0:23:42.14:0,42,1741	1/1:49,0:46:57.17:1756,57,0	1/1:29,14:45:42.14:2958,42,0	1/1:21,7:29:51.18:2744,51,0	1/1:20,3:27:11.98:786,12,0	0/0:26,0:26:51.16:0,51,1877	1/1:27,2:30:18.06:1313,18,0	1/1:18,5:23:15.05:1096,15,0	1/1:27,13:43:51.18:3817,51,0	0/0:27,0:27:66.21:0,66,2747	1/1:28,2:32:12.04:562,12,0	0/0:18,0:18:33.05:0,33,1228	1/1:26,3:30:33.11:1315,33,0	1/1:31,4:37:42.14:2499,42,0	1/1:37,5:46:8.52:500,9,0	1/1:22,6:29:21.07:1471,21,0	1/1:12,4:18:17.94:1148,18,0	1/1:22,4:29:15.94:1021,16,0	1/1:17,5:24:27.09:1765,27,0	1/1:17,9:29:51.15:3226,51,0	1/1:26,5:32:30.10:2061,30,0	1/1:3,1:5:6.02:388,6,0
chr10	16603622	.	TTG	T	636.88	PASS	AB=0.973;AC=21;AF=0.500;AN=42;BaseQRankSum=0.233;DP=507;FS=2.631;HRun=0;HaplotypeScore=68.3972;InbreedingCoeff=0.2221;MQ=75.00;MQ0=13;MQRankSum=1.922;QD=2.36;ReadPosRankSum=0.024;VQSLOD=1.7509;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:29,1:28:11.82:92,12,0	0/0:1,0:1:3.01:0,3,44	./.	./.	0/0:15,0:15:3.01:0,3,38	1/1:19,0:19:6:51,6,0	1/1:18,1:19:3.01:32,3,0	./.	0/1:12,0:12:26.18:26,0,35	0/0:16,0:15:11.85:0,12,96	0/0:14,0:15:5.74:0,6,38	0/0:15,0:15:2.88:0,3,15	0/1:13,0:12:34.64:37,0,35	1/1:11,0:10:5.95:49,6,0	0/0:10,0:10:6:0,6,67	1/1:18,2:21:1.02:141,1,0	0/1:41,4:43:13.81:14,0,142	1/1:19,8:28:17.85:172,18,0	./.	./.	./.	1/1:11,0:11:12:108,12,0	./.	1/1:24,8:32:3.27:32,3,0	0/1:12,0:11:6.99:16,0,7	0/0:16,0:16:3.01:0,3,38	0/1:16,0:16:7.58:8,0,19	0/0:9,0:9:9.01:0,9,111
chr10	16604009	.	T	TAA	621.20	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-1.668;DP=419;FS=1.901;HRun=12;HaplotypeScore=72.2246;InbreedingCoeff=0.8847;MQ=75.84;MQ0=2;MQRankSum=-1.887;QD=20.04;ReadPosRankSum=-0.329;VQSLOD=3.0195;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:59.90:0,60,548	0/0:6,0:6:11.94:0,12,106	0/0:15,0:11:8.59:0,9,68	0/0:14,0:11:14.26:0,14,108	0/0:17,0:17:29.17:0,29,276	0/0:14,0:14:32.93:0,33,293	0/0:9,0:9:23.88:0,24,209	0/0:25,0:26:50.54:0,51,451	0/0:10,0:10:21:0,21,194	0/0:21,0:22:41.43:0,41,353	0/0:14,0:15:28.24:0,28,240	0/0:11,0:11:26.72:0,27,234	0/0:14,0:14:26.96:0,27,250	0/0:12,0:14:29.39:0,29,245	0/0:17,0:17:29.91:0,30,277	1/1:7,7:14:27.08:361,27,0	0/0:18,0:18:39.01:0,39,361	1/1:6,9:17:32.51:381,33,0	0/0:20,0:20:41.95:0,42,388	0/0:15,0:15:36.02:0,36,333	0/0:7,0:7:5.94:0,6,55	0/0:13,0:13:24:0,24,222	0/0:6,0:6:18.02:0,18,167	0/0:20,0:21:44.44:0,44,382	0/0:13,0:15:32.46:0,32,273	0/0:16,0:17:40.27:0,40,342	0/0:14,0:14:29.97:0,30,278	0/0:9,0:9:20.97:0,21,194
chr10	16604067	.	GC	G	6437.09	PASS	AB=0.526;AC=43;AF=0.768;AN=56;BaseQRankSum=4.333;DP=412;FS=2.256;HRun=9;HaplotypeScore=51.6974;InbreedingCoeff=0.8517;MQ=84.55;MQ0=0;MQRankSum=-2.866;QD=21.31;ReadPosRankSum=1.962;VQSLOD=5.6517;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:25:66:0,66,721	1/1:2,4:6:6:55,6,0	0/0:14,0:14:21.04:0,21,224	0/0:19,0:19:24.52:0,25,252	1/1:0,8:8:21:189,21,0	0/0:10,0:10:27.08:0,27,312	0/0:26,0:26:78.20:0,78,880	1/1:6,14:20:35.99:325,36,0	1/1:2,12:14:36.01:325,36,0	1/1:4,9:13:27:242,27,0	1/1:3,4:7:11.75:109,12,0	0/0:14,0:14:36.11:0,36,415	1/1:4,8:12:24:217,24,0	1/1:3,19:22:57.03:521,57,0	1/1:1,19:20:22.40:435,22,0	1/1:1,17:18:51.03:466,51,0	1/1:1,24:25:66.04:604,66,0	1/1:1,14:15:45.02:411,45,0	1/1:2,13:15:38.70:321,39,0	1/1:1,13:14:26.99:244,27,0	1/1:1,10:11:21.01:192,21,0	1/1:1,12:13:24.01:219,24,0	1/1:1,4:5:12:110,12,0	0/1:2,18:20:12.20:410,0,12	1/1:1,14:15:42.02:384,42,0	1/1:0,14:14:42.02:384,42,0	1/1:0,10:10:24.01:220,24,0	1/1:1,4:5:6:55,6,0
chr10	16605990	.	A	AT	6974.89	PASS	AB=0.777;AC=40;AF=0.714;AN=56;BaseQRankSum=-7.881;DP=446;FS=3.785;HRun=10;HaplotypeScore=48.0028;InbreedingCoeff=0.6681;MQ=73.88;MQ0=0;MQRankSum=-0.373;QD=21.26;ReadPosRankSum=-0.258;VQSLOD=5.5883;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:46:99:0,125,1013	1/1:1,6:7:12.03:125,12,0	0/1:4,0:5:11.32:11,0,61	0/1:16,0:14:12.64:37,0,13	1/1:2,14:17:42.50:424,42,0	0/0:11,0:12:32:0,32,252	0/0:19,0:19:50.86:0,51,409	1/1:8,13:22:20.30:405,20,0	1/1:1,9:10:27.07:288,27,0	1/1:3,17:21:53.94:543,54,0	1/1:2,9:12:17.91:174,18,0	0/0:12,0:12:32.93:0,33,268	1/1:0,8:9:23.93:238,24,0	0/1:3,8:11:0.30:192,0,0	1/1:4,6:10:15.04:160,15,0	0/0:7,0:7:17.98:0,18,148	1/1:4,26:30:50.54:743,51,0	0/0:22,0:22:59.91:0,60,489	1/1:8,12:20:36.09:383,36,0	1/1:2,15:17:36.09:384,36,0	1/1:1,12:13:30.08:320,30,0	1/1:3,12:15:5.43:263,5,0	0/1:1,8:9:3.57:171,0,4	1/1:3,21:24:51.13:544,51,0	1/1:1,14:16:41.94:430,42,0	1/1:2,20:22:57.14:608,57,0	1/1:2,8:11:3.24:231,3,0	1/1:3,8:11:30.03:301,30,0
chr10	16606816	.	G	GGAGA	3834.07	PASS	AB=0.805;AC=47;AF=0.839;AN=56;BaseQRankSum=0.138;DP=602;FS=2.601;HRun=0;HaplotypeScore=112.4903;InbreedingCoeff=-0.0111;MQ=78.25;MQ0=19;MQRankSum=1.027;QD=6.93;ReadPosRankSum=1.490;VQSLOD=1.9959;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:30:12.03:227,12,0	1/1:3,0:3:2.68:11,3,0	0/0:49,0:28:2.78:0,3,24	0/1:62,0:36:0.31:0,0,33	0/1:14,0:23:19.61:20,0,74	1/1:11,7:20:15.05:318,15,0	1/1:15,4:21:8.77:155,9,0	0/1:27,0:26:24.04:24,0,63	1/1:7,5:14:11.51:167,12,0	0/1:16,0:22:61.08:68,0,61	1/1:5,0:9:2.74:12,3,0	1/1:11,6:17:27.05:502,27,0	1/1:9,5:15:9.03:214,9,0	1/1:10,5:17:6.02:143,6,0	0/1:15,0:23:36.07:36,0,114	1/1:18,0:16:14.66:198,15,0	0/1:10,0:26:14.04:101,0,14	1/1:17,0:17:12.04:205,12,0	1/1:10,0:17:20.78:303,21,0	1/1:12,0:14:2.74:12,3,0	1/1:14,0:21:8.23:37,8,0	1/1:11,3:15:3.01:70,3,0	1/1:10,4:14:2.57:70,3,0	1/1:14,15:30:26.83:582,27,0	1/1:7,8:19:6.02:142,6,0	0/1:15,0:22:50.27:59,0,50	1/1:10,0:23:27.45:122,27,0	1/1:5,0:9:8.23:37,8,0
chr10	16613162	.	G	GT	5719.29	PASS	AB=0.857;AC=55;AF=0.982;AN=56;BaseQRankSum=-3.388;DP=172;FS=9.072;HRun=0;HaplotypeScore=47.9504;InbreedingCoeff=0.0384;MQ=69.93;MQ0=0;MQRankSum=-3.222;QD=33.25;ReadPosRankSum=-0.195;VQSLOD=3.3207;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,9:11:21.05:279,21,0	1/1:1,1:2:6:70,6,0	1/1:3,2:5:8.99:101,9,0	0/1:5,1:6:7.66:51,0,8	1/1:0,2:2:3.01:34,3,0	1/1:1,6:7:21.05:301,21,0	1/1:1,17:18:51.16:711,51,0	1/1:1,11:12:36.11:539,36,0	1/1:0,7:7:21.07:320,21,0	1/1:1,4:5:13.28:170,13,0	1/1:1,3:4:5.88:49,6,0	1/1:2,6:8:17.35:211,17,0	1/1:1,4:5:15.04:197,15,0	1/1:0,3:3:8.96:109,9,0	1/1:0,9:9:27.09:391,27,0	1/1:2,4:6:18.03:235,18,0	1/1:2,6:8:18.02:249,18,0	1/1:1,1:2:3.01:47,3,0	1/1:1,2:3:9.02:121,9,0	1/1:1,2:3:9.02:117,9,0	1/1:1,9:10:18.04:231,18,0	1/1:0,1:1:3.01:34,3,0	1/1:0,1:1:1.25:3,1,0	1/1:1,7:8:14.85:133,15,0	1/1:0,4:4:12.04:184,12,0	1/1:2,7:10:27.08:380,27,0	1/1:3,8:10:27.98:408,28,0	1/1:0,1:1:3.01:47,3,0
chr10	16613321	.	CTT	C	630.85	PASS	AB=0.963;AC=37;AF=0.925;AN=40;BaseQRankSum=-3.513;DP=61;FS=7.732;HRun=2;HaplotypeScore=15.0207;InbreedingCoeff=-0.0398;MQ=94.42;MQ0=0;MQRankSum=-1.366;QD=11.07;ReadPosRankSum=-0.468;VQSLOD=0.0351;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,0:3:2.97:44,3,0	1/1:2,0:2:4.26:44,4,0	0/1:9,0:7:1.57:2,0,81	0/1:7,1:6:42.35:42,0,60	1/1:3,0:3:3.01:41,3,0	./.	1/1:5,1:6:12:128,12,0	1/1:1,0:1:3.01:45,3,0	./.	./.	./.	./.	1/1:1,0:1:2.74:12,3,0	1/1:1,0:1:3.01:44,3,0	1/1:2,0:2:2.98:22,3,0	1/1:0,1:1:3.01:36,3,0	1/1:1,0:1:2.60:10,3,0	1/1:3,1:4:1.31:2,1,0	0/1:2,0:2:13.64:37,0,14	./.	1/1:3,0:3:5.99:60,6,0	1/1:1,0:1:3.01:44,3,0	./.	1/1:2,0:2:2.11:44,2,0	1/1:2,0:2:0.47:1,0,0	1/1:2,0:2:3:27,3,0	1/1:3,0:2:3.01:42,3,0	./.
chr10	16614882	.	TG	T	1054.99	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.629;DP=711;FS=0.590;HRun=8;HaplotypeScore=76.4115;InbreedingCoeff=0.9956;MQ=74.78;MQ0=0;MQRankSum=-3.826;QD=22.45;ReadPosRankSum=0.651;VQSLOD=4.0439;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,134,1567	0/0:6,0:6:18.06:0,18,217	0/0:24,0:24:45.76:0,46,632	0/0:15,0:15:35.67:0,36,378	0/0:19,0:19:48.14:0,48,569	0/0:22,0:22:63.19:0,63,759	0/0:29,0:29:69.20:0,69,820	0/0:22,0:22:39.08:0,39,447	0/0:28,0:28:75.21:0,75,886	0/0:28,0:28:69.21:0,69,832	0/0:17,0:17:39.12:0,39,471	0/0:29,0:29:78.24:0,78,941	0/0:24,0:24:63.19:0,63,759	0/0:24,0:24:62.38:0,62,708	0/0:35,0:35:96.27:0,96,1135	1/1:3,23:26:69.10:665,69,0	0/0:29,0:29:75.23:0,75,906	1/1:2,19:21:54.03:512,54,0	0/0:30,0:30:75.19:0,75,879	0/0:17,0:17:42.13:0,42,501	0/0:50,0:50:99:0,129,1533	0/0:35,0:35:93.27:0,93,1108	0/0:17,0:17:42.12:0,42,493	0/0:29,0:29:81.21:0,81,960	0/0:23,0:23:60.04:0,60,693	0/0:22,0:22:54.12:0,54,634	0/0:25,0:26:72.18:0,72,854	0/0:13,0:13:36.11:0,36,435
chr10	16615565	.	ATGGG	A	1905.30	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.975;DP=926;FS=25.117;HRun=0;HaplotypeScore=160.9579;InbreedingCoeff=0.9674;MQ=69.33;MQ0=0;MQRankSum=-1.997;QD=36.64;ReadPosRankSum=1.616;VQSLOD=1.9350;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:58:99:0,147,3321	0/0:13,0:13:36.11:0,36,813	0/0:30,0:30:40.28:0,40,1163	0/0:30,0:30:69.15:0,69,1380	0/0:23,0:23:66.14:0,66,1367	0/0:27,0:27:72.12:0,72,1589	0/0:31,0:31:63.27:0,63,1810	0/0:33,0:31:72.16:0,72,1382	0/0:35,0:35:93.28:0,93,2200	0/0:50,0:49:99:0,123,2832	0/0:20,0:20:44.94:0,45,995	0/0:42,0:42:99:0,110,2424	0/0:37,0:37:99:0,102,2350	0/0:43,0:43:99:0,108,2524	0/0:49,0:49:99:0,129,3116	1/1:12,23:34:19.25:1405,19,0	0/0:51,0:51:99:0,141,3221	1/1:6,11:16:34.34:620,34,0	0/0:22,0:22:42.12:0,42,860	0/0:28,0:28:72.20:0,72,1562	0/0:79,0:79:99:0,192,4177	0/0:31,0:31:69.13:0,69,1592	0/0:29,0:29:81.21:0,81,1780	0/0:34,0:34:73.12:0,73,1936	0/0:25,0:25:46.59:0,47,1666	0/0:33,0:33:87.28:0,87,2098	0/0:16,0:15:45.14:0,45,1068	0/0:5,0:5:9.03:0,9,231
chr10	16615647	.	TGATG	T	1388.98	PASS	AB=0.906;AC=4;AF=0.071;AN=56;BaseQRankSum=4.961;DP=1030;FS=5.120;HRun=0;HaplotypeScore=224.8289;InbreedingCoeff=0.4448;MQ=63.88;MQ0=20;MQRankSum=-2.883;QD=10.68;ReadPosRankSum=1.672;VQSLOD=2.6038;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:38:86.20:0,86,1842	0/0:13,0:13:36.12:0,36,907	0/1:79,4:42:31.87:32,0,1242	0/0:91,1:55:16.89:0,17,1492	0/0:26,0:26:39.06:0,39,884	0/0:24,0:23:60.14:0,60,1351	0/0:41,0:40:84.10:0,84,1818	0/0:51,0:48:95.87:0,96,1957	0/0:43,0:43:79.09:0,79,1489	0/0:44,0:38:90.28:0,90,1808	0/0:13,0:12:12.03:0,12,252	0/0:49,0:48:99:0,114,2732	0/0:42,0:42:96.13:0,96,1986	0/0:48,0:47:99:0,102,2008	0/0:44,0:44:81.10:0,81,1580	1/1:17,11:28:70.46:1114,70,0	0/0:36,0:36:69.20:0,69,1493	0/1:15,3:18:55.25:359,0,55	0/0:27,0:21:42.14:0,42,874	0/0:21,0:21:41.96:0,42,913	0/0:74,0:75:85.30:0,85,1865	0/0:23,0:22:33.11:0,33,764	0/0:16,0:13:21.07:0,21,461	0/0:33,0:32:42.35:0,42,1176	0/0:26,0:26:42.14:0,42,1013	0/0:32,0:29:57.07:0,57,1187	0/0:35,0:35:66.21:0,66,1296	0/0:6,0:6:14.91:0,15,195
chr10	16615664	.	TGATGGATG	T	5735.80	PASS	AB=0.822;AC=25;AF=0.500;AN=50;BaseQRankSum=2.602;DP=1083;FS=10.651;HRun=0;HaplotypeScore=260.1255;InbreedingCoeff=0.2461;MQ=53.82;MQ0=100;MQRankSum=-7.165;QD=9.79;ReadPosRankSum=1.942;VQSLOD=1.9363;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:39:54.62:0,55,1754	./.	./.	./.	0/1:16,11:25:0.16:43,0,0	0/0:19,0:18:32.52:0,33,916	0/0:43,0:41:28.68:0,29,1095	0/1:66,0:56:36.12:36,0,137	0/1:19,19:38:10.04:713,0,10	1/1:42,4:38:36.12:788,36,0	0/0:8,4:11:0.47:0,0,1	0/0:46,0:45:69.22:0,69,1915	1/1:23,20:42:20.84:663,21,0	1/1:24,24:48:33.11:819,33,0	0/1:19,17:35:11.01:564,0,11	0/1:30,0:30:99:197,0,329	1/1:17,17:33:11.63:234,12,0	0/1:18,0:18:9.35:9,0,266	1/1:38,2:27:6.91:152,7,0	1/1:14,14:28:6.02:122,6,0	0/0:44,35:77:1.65:0,2,19	0/0:16,8:20:0:0,0,0	0/1:12,6:13:0:0,0,0	0/1:19,17:34:6.35:221,0,6	0/0:19,14:31:3:0,3,28	0/1:28,3:24:62.09:268,0,62	1/1:16,19:35:23.53:597,24,0	1/1:4,8:11:14.79:311,15,0
chr10	16615676	.	G	GT	740.71	PASS	AB=0.888;AC=6;AF=0.107;AN=56;BaseQRankSum=3.482;DP=1058;FS=2.865;HRun=1;HaplotypeScore=186.1285;InbreedingCoeff=-0.1112;MQ=48.29;MQ0=108;MQRankSum=-2.991;QD=3.76;ReadPosRankSum=-1.814;VQSLOD=-0.3888;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,1:43:99:0,100,1432	0/0:15,0:14:30.09:0,30,403	0/1:75,1:13:3.15:3,0,211	0/0:78,4:25:2.31:0,2,566	0/0:23,0:20:24.06:0,24,314	0/0:19,0:17:10.13:0,10,592	0/0:39,0:37:93.86:0,94,1231	0/0:74,0:60:99:0,165,1934	0/0:37,0:36:69.93:0,70,707	0/0:48,2:41:65.87:0,66,1102	0/0:11,2:11:10.22:0,10,111	0/0:42,1:42:99:0,121,1678	0/0:46,0:45:80.98:0,81,931	0/0:43,0:42:69.30:0,69,718	0/0:34,0:33:15.83:0,16,577	0/1:19,15:34:99:561,0,566	0/0:31,0:30:23.75:0,24,423	0/1:14,6:20:99:246,0,307	0/0:37,0:25:53.79:0,54,617	0/0:25,0:25:39.61:0,40,438	0/0:81,0:76:67.25:0,67,871	0/1:21,1:18:3.31:3,0,229	0/0:17,0:12:15.92:0,16,195	0/0:33,0:31:38.86:0,39,436	0/1:33,0:30:2.54:3,0,465	0/0:38,0:30:79.36:0,79,936	0/0:30,0:30:37.88:0,38,374	0/1:11,1:11:30.49:30,0,79
chr10	16616227	.	C	CTT	907.69	PASS	AB=0.579;AC=2;AF=0.036;AN=56;BaseQRankSum=7.755;DP=925;FS=4.961;HRun=0;HaplotypeScore=135.0558;InbreedingCoeff=0.3776;MQ=53.49;MQ0=1;MQRankSum=-5.759;QD=29.28;ReadPosRankSum=2.793;VQSLOD=5.5022;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:68,0:68:99:0,202,3171	0/0:14,0:14:33.07:0,33,537	0/0:27,0:23:60.20:0,60,944	0/0:20,0:18:54.18:0,54,871	0/0:34,0:34:71.98:0,72,1173	0/0:25,0:25:72.25:0,72,1174	0/0:33,0:33:93.27:0,93,1460	0/0:36,0:36:99:0,102,1660	0/0:40,0:40:99:0,117,1843	0/0:46,0:46:99:0,135,2118	0/0:31,0:31:90.29:0,90,1435	0/0:43,0:43:99:0,123,1976	0/0:37,0:37:99:0,111,1781	0/0:33,0:33:93.32:0,93,1512	0/0:45,0:45:99:0,123,2004	0/1:3,14:17:0.71:593,0,1	0/0:46,0:46:99:0,138,2246	0/1:5,9:14:12.85:403,0,13	0/0:19,0:19:57.19:0,57,929	0/0:29,0:29:81.26:0,81,1294	0/0:66,0:66:99:0,199,3203	0/0:36,0:36:99:0,105,1709	0/0:22,0:22:60.20:0,60,978	0/0:44,0:44:99:0,120,1878	0/0:27,0:27:81.28:0,81,1320	0/0:34,0:34:99:0,99,1591	0/0:25,0:25:72.23:0,72,1150	0/0:14,0:14:42.14:0,42,685
chr10	16616228	.	A	AATTT	2060.23	PASS	AB=0.627;AC=2;AF=0.036;AN=56;BaseQRankSum=8.359;DP=935;FS=5.255;HRun=0;HaplotypeScore=170.3895;InbreedingCoeff=0.2693;MQ=53.92;MQ0=0;MQRankSum=-7.252;QD=54.22;ReadPosRankSum=0.781;VQSLOD=4.5137;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:70,0:70:99:0,202,4117	0/0:14,0:14:36.11:0,36,701	0/0:28,0:24:63.20:0,63,1245	0/0:19,0:18:54.19:0,54,1084	0/0:34,0:34:72.12:0,72,1501	0/0:25,0:25:72.25:0,72,1509	0/0:33,0:33:93.30:0,93,1871	0/0:37,0:37:99:0,108,2111	0/0:40,0:40:99:0,117,2324	0/0:45,0:45:99:0,129,2640	0/0:31,0:31:90.31:0,90,1868	0/0:45,0:45:99:0,123,2545	0/0:38,0:38:99:0,111,2302	0/0:33,0:33:93.30:0,93,1910	0/0:45,0:45:99:0,126,2601	0/1:6,14:20:2.63:1194,0,3	0/0:46,0:46:99:0,138,2801	0/1:9,9:18:78.60:955,0,79	0/0:19,0:19:57.20:0,57,1196	0/0:29,0:29:84.26:0,84,1668	0/0:66,0:66:99:0,196,4089	0/0:36,0:36:99:0,105,2194	0/0:22,0:22:63.20:0,63,1282	0/0:42,0:42:99:0,114,2364	0/0:28,0:28:81.28:0,81,1650	0/0:34,0:34:99:0,102,2096	0/0:24,0:24:69.24:0,69,1446	0/0:14,0:14:42.14:0,42,873
chr10	16616333	.	G	GA	6341.85	PASS	AB=0.782;AC=19;AF=0.339;AN=56;BaseQRankSum=23.369;DP=1247;FS=10.282;HRun=0;HaplotypeScore=377.6398;InbreedingCoeff=-0.4828;MQ=52.24;MQ0=0;MQRankSum=-13.314;QD=7.02;ReadPosRankSum=-10.475;VQSLOD=2.1655;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,111,1615	0/1:18,18:36:99:592,0,401	0/1:43,2:39:2.16:2,0,1146	0/0:38,1:31:38.38:0,38,1085	0/1:41,22:63:99:162,0,562	0/1:23,6:29:99:186,0,653	0/1:35,4:39:21.70:22,0,1106	0/0:31,2:32:60.81:0,61,1169	0/1:32,4:36:55.57:56,0,1100	0/1:51,21:71:99:861,0,1414	0/1:23,19:42:99:238,0,378	0/1:33,13:46:99:270,0,1038	0/1:34,7:41:39.25:39,0,1175	0/1:36,5:41:29.04:29,0,1244	0/1:48,8:56:2.11:2,0,1604	0/0:35,0:35:99:0,99,1381	0/0:37,1:38:82.51:0,83,1372	0/0:26,1:27:51.91:0,52,982	0/0:19,0:19:51.14:0,51,691	0/1:32,28:60:99:504,0,584	0/0:58,0:58:99:0,141,1928	0/1:32,24:56:99:547,0,613	0/1:26,19:45:99:386,0,541	0/0:42,1:43:73.84:0,74,1306	0/1:32,35:68:99:942,0,548	0/1:44,17:61:99:688,0,1282	0/1:25,9:34:99:228,0,705	0/1:18,16:33:99:588,0,575
chr10	16616338	.	T	TA	5436.78	PASS	AB=0.798;AC=17;AF=0.304;AN=56;BaseQRankSum=24.992;DP=1354;FS=25.309;HRun=1;HaplotypeScore=479.7745;InbreedingCoeff=-0.4402;MQ=50.29;MQ0=0;MQRankSum=-15.806;QD=6.05;ReadPosRankSum=-8.990;VQSLOD=0.9399;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,1:51:55.07:0,55,1526	0/1:22,12:42:99:499,0,457	0/0:48,4:44:16.02:0,16,1237	0/0:48,1:38:61.01:0,61,1306	0/1:42,20:66:99:197,0,546	0/1:18,5:27:99:182,0,631	0/0:41,1:44:0.69:0,1,1083	0/0:38,0:38:5.75:0,6,1109	0/1:35,0:37:8.01:8,0,1150	0/1:61,22:90:99:1076,0,1329	0/1:31,13:49:99:253,0,390	0/1:39,2:47:99:146,0,970	0/1:40,1:45:15.93:16,0,1111	0/1:43,2:46:1.44:1,0,1269	0/1:55,0:58:67.24:67,0,1468	0/0:35,0:35:73.64:0,74,1313	0/0:35,0:35:32.27:0,32,1106	0/0:25,0:26:56.05:0,56,948	0/0:19,0:19:42.83:0,43,608	0/1:41,19:67:99:407,0,555	0/0:56,0:55:99:0,132,1807	0/1:35,18:62:99:426,0,630	0/1:29,15:52:99:300,0,466	0/0:43,0:43:74.33:0,74,1294	0/1:37,28:75:99:669,0,603	0/1:43,16:61:99:572,0,1153	0/1:29,5:37:99:217,0,663	0/1:19,11:33:99:400,0,570
chr10	16616386	.	TG	T	5250.84	PASS	AB=0.848;AC=25;AF=0.446;AN=56;BaseQRankSum=8.826;DP=1270;FS=2.473;HRun=2;HaplotypeScore=452.8122;InbreedingCoeff=-0.8017;MQ=37.96;MQ0=9;MQRankSum=-4.970;QD=4.37;ReadPosRankSum=-1.593;VQSLOD=0.6150;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:47,6:53:85.64:86,0,1198	0/1:29,8:37:99:284,0,637	0/1:22,15:19:99:217,0,284	0/1:35,12:31:99:262,0,452	0/1:42,21:63:76.33:76,0,145	0/1:22,5:27:99:115,0,411	0/1:34,1:35:69.52:70,0,601	0/1:35,5:35:99:105,0,773	0/1:35,2:37:25.80:26,0,859	0/1:76,27:99:99:882,0,1476	0/1:43,14:56:99:196,0,371	0/1:46,6:52:62.68:63,0,688	0/1:37,1:38:99:116,0,519	0/1:36,3:39:41.62:42,0,460	0/1:47,4:51:41.79:42,0,698	0/1:27,3:30:74.95:75,0,683	0/0:25,1:26:14.66:0,15,719	0/0:14,0:14:30.03:0,30,393	0/1:19,6:21:69.24:69,0,443	0/1:45,22:66:99:363,0,373	0/1:37,1:36:8.80:9,0,328	0/1:55,17:72:99:290,0,628	0/1:34,16:49:99:381,0,138	0/0:28,0:28:25.04:0,25,332	0/1:63,21:83:99:661,0,861	0/1:49,13:60:99:404,0,1413	0/1:24,7:31:99:197,0,444	0/1:20,7:27:99:221,0,496
chr10	16616400	.	G	GA	607.01	PASS	AB=1.000;AC=39;AF=0.929;AN=42;BaseQRankSum=-1.676;DP=92;FS=13.358;HRun=0;HaplotypeScore=27.6573;InbreedingCoeff=-0.0035;MQ=51.08;MQ0=2;MQRankSum=0.791;QD=8.55;ReadPosRankSum=0.348;VQSLOD=1.6621;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,1:4:3:25,3,0	1/1:1,0:1:3:25,3,0	0/1:7,0:4:29.51:51,0,30	0/0:12,1:7:3.48:0,3,33	./.	1/1:4,0:4:2.98:22,3,0	1/1:3,0:3:5.99:49,6,0	./.	1/1:3,1:4:3.01:45,3,0	1/1:5,0:4:5.99:50,6,0	1/1:3,0:3:3.01:46,3,0	1/1:3,0:3:3.01:45,3,0	1/1:3,0:3:2.99:24,3,0	./.	1/1:2,1:3:3.01:46,3,0	1/1:2,4:6:2.97:20,3,0	1/1:4,0:4:4.95:45,5,0	./.	1/1:1,2:2:3.01:46,3,0	./.	1/1:2,0:2:3:25,3,0	./.	./.	1/1:3,0:3:3:27,3,0	1/1:5,0:5:6:69,6,0	1/1:2,0:2:2.99:23,3,0	1/1:2,0:2:1.25:3,1,0	1/1:3,0:3:2.90:16,3,0
chr10	16616655	.	GCA	G	5609.81	PASS	AB=0.818;AC=20;AF=0.357;AN=56;BaseQRankSum=19.280;DP=931;FS=33.013;HRun=0;HaplotypeScore=352.0370;InbreedingCoeff=-0.5525;MQ=38.51;MQ0=6;MQRankSum=-7.399;QD=7.56;ReadPosRankSum=5.638;VQSLOD=3.0699;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:27,5:32:99:144,0,603	0/1:21,7:31:99:570,0,236	0/0:18,0:8:24:0,24,260	0/0:19,0:12:11.47:0,11,186	0/0:24,24:53:14.14:0,14,199	0/1:22,5:29:99:451,0,379	0/1:16,6:25:99:231,0,269	0/0:28,0:28:58.20:0,58,698	0/1:40,2:44:99:156,0,942	0/1:36,20:59:99:880,0,763	0/1:19,10:31:43.22:299,0,43	0/1:29,3:32:99:135,0,653	0/1:21,4:27:99:153,0,443	0/1:38,2:40:99:102,0,660	0/1:31,4:35:99:142,0,595	0/1:34,3:39:99:221,0,586	0/1:19,1:21:6.45:6,0,536	0/0:12,0:12:32.79:0,33,334	0/0:13,3:12:33.03:0,33,362	0/1:36,12:52:99:226,0,312	0/0:14,0:14:36.02:0,36,445	0/1:34,14:52:99:333,0,449	0/1:31,7:37:99:108,0,249	0/0:26,1:28:23.45:0,23,259	0/1:31,9:41:99:526,0,568	0/1:36,9:48:99:503,0,777	0/1:28,3:32:84.82:85,0,573	0/1:14,9:24:99:337,0,248
chr10	16616669	.	T	TG	5843.20	PASS	AB=0.764;AC=20;AF=0.357;AN=56;BaseQRankSum=21.282;DP=999;FS=36.067;HRun=1;HaplotypeScore=365.4131;InbreedingCoeff=-0.5607;MQ=41.46;MQ0=5;MQRankSum=-9.686;QD=7.45;ReadPosRankSum=3.255;VQSLOD=0.9429;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:30,6:38:99:116,0,802	0/1:15,9:31:99:546,0,233	0/0:25,0:15:30.47:0,30,419	0/0:23,0:16:45.09:0,45,522	0/0:37,7:53:15:0,15,196	0/1:17,9:33:99:457,0,526	0/1:18,4:28:99:321,0,346	0/0:33,2:34:54.32:0,54,1171	0/1:30,7:39:99:187,0,978	0/1:53,7:66:99:674,0,1187	0/1:17,9:30:99:144,0,121	0/1:23,9:33:99:161,0,732	0/1:21,5:32:99:182,0,564	0/1:30,6:41:99:279,0,781	0/1:27,7:35:99:271,0,612	0/1:19,17:37:99:538,0,598	0/0:19,1:21:4.75:0,5,609	0/0:15,0:15:45.15:0,45,584	0/1:14,1:15:7.09:7,0,373	0/1:32,17:56:99:348,0,351	0/0:15,0:15:36.12:0,36,467	0/1:41,8:58:99:301,0,610	0/1:28,12:40:99:231,0,369	0/0:27,1:28:45.86:0,46,618	0/1:34,11:47:99:218,0,824	0/1:41,9:54:99:444,0,1078	0/1:23,8:33:99:287,0,621	0/1:21,0:26:99:131,0,556
chr10	16616676	.	T	TG	3939.83	PASS	AB=0.825;AC=20;AF=0.357;AN=56;BaseQRankSum=20.232;DP=1030;FS=8.630;HRun=1;HaplotypeScore=369.6632;InbreedingCoeff=-0.5992;MQ=47.13;MQ0=5;MQRankSum=-11.520;QD=4.83;ReadPosRankSum=0.363;VQSLOD=-0.7028;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:36,3:40:23.98:24,0,924	0/1:20,10:31:99:467,0,247	0/1:28,1:20:33.95:34,0,500	0/0:24,0:18:48.09:0,48,592	0/0:30,17:53:18.02:0,18,221	0/1:30,5:35:99:190,0,549	0/1:23,3:28:99:205,0,383	0/0:35,2:36:57.37:0,57,1240	0/1:36,5:41:99:131,0,1097	0/1:50,13:66:99:615,0,1329	0/1:16,12:31:99:109,0,145	0/1:33,3:37:78.02:78,0,880	0/1:29,5:35:99:133,0,746	0/1:33,4:37:73.58:74,0,885	0/1:27,6:33:88.50:89,0,806	0/1:30,11:41:99:423,0,686	0/0:20,1:21:0.45:0,0,640	0/0:16,0:16:48.12:0,48,605	0/0:16,1:16:1.91:0,2,466	0/1:31,19:54:99:187,0,351	0/0:19,0:19:42.12:0,42,530	0/1:45,10:59:99:222,0,615	0/1:32,14:45:99:192,0,417	0/0:25,2:27:9.30:0,9,616	0/1:36,9:49:99:159,0,801	0/1:46,8:57:99:327,0,1236	0/1:27,7:34:99:158,0,657	0/1:19,3:24:99:123,0,504
chr10	16616845	.	GT	G	1720.36	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.079;DP=828;FS=5.140;HRun=3;HaplotypeScore=85.6531;InbreedingCoeff=0.9988;MQ=80.53;MQ0=0;MQRankSum=0.015;QD=33.73;ReadPosRankSum=0.027;VQSLOD=3.8466;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,126,1771	0/0:12,0:12:24.08:0,24,345	0/0:28,0:28:78.23:0,78,1078	0/0:25,0:25:69.13:0,69,893	0/0:23,0:23:54.18:0,54,774	0/0:29,0:29:84.28:0,84,1209	0/0:27,0:27:78.26:0,78,1123	0/0:29,0:29:84.28:0,84,1209	0/0:39,0:39:99:0,111,1559	0/0:38,0:37:99:0,108,1493	0/0:31,0:31:78.26:0,78,1119	0/0:28,0:28:81.26:0,81,1148	0/0:29,0:29:87.28:0,87,1235	0/0:37,0:37:99:0,108,1555	0/0:34,0:34:93.31:0,93,1335	1/1:0,26:26:78.25:967,78,0	0/0:31,0:30:93.23:0,93,1284	1/1:0,25:25:72.18:875,72,0	0/0:22,0:22:66.21:0,66,929	0/0:29,0:28:72.20:0,72,1012	0/0:63,0:63:99:0,190,2683	0/0:26,0:26:75.24:0,75,1060	0/0:26,0:24:60.20:0,60,863	0/0:36,0:36:99:0,102,1467	0/0:21,0:21:57.15:0,57,792	0/0:27,0:27:72.24:0,72,1037	0/0:28,0:27:81.24:0,81,1142	0/0:13,0:13:33.10:0,33,458
chr10	16620586	.	G	GT	1400.59	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-8.723;DP=682;FS=2.807;HRun=7;HaplotypeScore=64.2137;InbreedingCoeff=0.9995;MQ=73.24;MQ0=0;MQRankSum=-3.470;QD=24.15;ReadPosRankSum=2.386;VQSLOD=4.1997;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,102,978	0/0:12,0:12:30.05:0,30,290	0/0:20,0:19:34.37:0,34,299	0/0:19,0:19:41.64:0,42,356	0/0:26,0:26:72.12:0,72,695	0/0:28,0:28:78.09:0,78,741	0/0:16,0:16:42.07:0,42,406	0/0:37,0:37:93.13:0,93,894	0/0:20,0:20:48.07:0,48,463	0/0:27,0:27:72.10:0,72,692	0/0:22,0:22:57.07:0,57,545	0/0:13,0:13:39.05:0,39,371	0/0:17,0:17:45.07:0,45,434	0/0:22,0:22:60.09:0,60,579	0/0:35,0:35:93.13:0,93,888	1/1:3,20:23:54.17:653,54,0	0/0:22,0:22:60.07:0,60,571	1/1:4,31:35:72.22:870,72,0	0/0:20,0:20:48.05:0,48,453	0/0:22,0:22:63.08:0,63,602	0/0:16,0:16:45.05:0,45,427	0/0:27,0:27:74.99:0,75,709	0/0:23,0:23:54.07:0,54,515	0/0:22,0:22:63.02:0,63,586	0/0:31,0:31:87.07:0,87,824	0/0:27,0:27:78.12:0,78,753	0/0:35,0:36:95.15:0,95,892	0/0:24,0:24:54.04:0,54,513
chr10	16625021	.	C	CT	244.70	PASS	AB=0.777;AC=4;AF=0.071;AN=56;BaseQRankSum=-0.177;DP=343;FS=3.455;HRun=12;HaplotypeScore=32.5614;InbreedingCoeff=0.1085;MQ=63.30;MQ0=31;MQRankSum=2.265;QD=4.29;ReadPosRankSum=1.061;VQSLOD=-0.2947;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:21,2:19:2.25:2,0,221	0/0:2,0:2:5.97:0,6,44	0/0:19,0:9:5.21:0,5,39	0/0:12,0:7:5.81:0,6,35	0/0:13,0:14:19.26:0,19,206	0/0:18,0:14:29.78:0,30,216	0/0:4,0:4:5.95:0,6,44	0/0:34,0:27:41.66:0,42,363	0/0:6,0:6:11.93:0,12,88	0/0:7,0:7:17.88:0,18,129	0/0:4,0:3:5.94:0,6,44	0/0:8,0:9:17.81:0,18,124	0/1:2,0:2:0:0,0,0	0/0:5,0:4:8.94:0,9,66	0/0:9,0:9:11.88:0,12,87	0/1:1,5:6:3.79:128,0,4	0/0:37,0:27:68.51:0,69,496	0/1:11,14:19:13.75:204,0,14	0/0:16,0:16:35.68:0,36,254	0/0:4,0:3:8.94:0,9,64	0/0:4,0:4:2.97:0,3,22	0/0:5,0:4:3.84:0,4,24	0/0:7,0:7:17.84:0,18,125	0/0:1,0:1:2.98:0,3,22	0/0:13,0:13:17.83:0,18,130	0/0:19,1:16:18.33:0,18,285	0/0:10,0:10:17.74:0,18,122	0/0:24,0:22:50.67:0,51,369
chr10	16625330	.	G	GTGCTGTGAACGGCTATCCTCCAGAT	14165.63	PASS	AB=0.775;AC=42;AF=0.955;AN=44;BaseQRankSum=-0.248;DP=126;FS=53.463;HRun=0;HaplotypeScore=141.0399;InbreedingCoeff=-0.0963;MQ=89.59;MQ0=0;MQRankSum=-3.510;QD=115.17;ReadPosRankSum=3.142;VQSLOD=2.3055;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,0:9:21.06:1019,21,0	./.	0/1:6,0:8:99:671,0,110	0/1:4,1:6:34.88:588,0,35	1/1:2,0:2:3.01:129,3,0	1/1:5,0:5:14.64:925,15,0	1/1:11,0:11:30.10:1678,30,0	1/1:10,0:10:27.08:1813,27,0	1/1:2,0:2:2.98:277,3,0	./.	./.	1/1:6,0:6:12.01:677,12,0	1/1:3,0:3:6.02:286,6,0	./.	1/1:5,0:5:11.64:536,12,0	1/1:3,0:3:6.02:597,6,0	1/1:8,0:8:15.05:1078,15,0	1/1:5,0:5:15.01:872,15,0	1/1:4,0:4:5.45:79,5,0	./.	1/1:14,0:14:21.07:778,21,0	./.	1/1:2,0:2:3.01:85,3,0	1/1:9,0:9:9.03:307,9,0	1/1:2,0:2:2.60:10,3,0	1/1:5,0:5:11.78:856,12,0	1/1:2,0:2:6.02:409,6,0	1/1:2,0:2:6.02:495,6,0
chr10	16625805	.	T	TC	1708.35	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=11.440;DP=684;FS=1.151;HRun=1;HaplotypeScore=78.6160;InbreedingCoeff=0.9971;MQ=73.69;MQ0=0;MQRankSum=-3.731;QD=30.51;ReadPosRankSum=2.382;VQSLOD=3.4874;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,120,1530	0/0:7,0:7:21:0,21,224	0/0:17,0:17:45.03:0,45,523	0/0:15,0:15:39.12:0,39,483	0/0:15,0:15:42.12:0,42,529	0/0:22,0:22:66.21:0,66,843	0/0:42,0:42:99:0,126,1582	0/0:29,0:29:84.26:0,84,1057	0/0:30,0:30:84.26:0,84,1075	0/0:24,0:24:69.22:0,69,890	0/0:9,0:9:26.97:0,27,309	0/0:30,0:30:84.25:0,84,1059	0/0:26,0:26:75.24:0,75,973	0/0:25,0:25:75.20:0,75,931	0/0:24,0:24:69.21:0,69,882	1/1:1,21:22:62.93:791,63,0	0/0:36,0:36:99:0,102,1295	1/1:4,30:34:83.74:1039,84,0	0/0:16,0:16:45.12:0,45,568	0/0:17,0:17:51.14:0,51,644	0/0:49,0:49:99:0,144,1853	0/0:15,0:15:45.15:0,45,584	0/0:13,0:13:39.13:0,39,506	0/0:34,0:34:99:0,99,1244	0/0:25,0:25:72.23:0,72,933	0/0:36,0:36:99:0,105,1352	0/0:18,0:18:54.16:0,54,687	0/0:11,0:11:33.09:0,33,413
chr10	16629427	.	GCCTGCATGTGTGTGTGCCCCGGGC	G	3646.94	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.113;DP=629;FS=4.585;HRun=0;HaplotypeScore=368.9659;InbreedingCoeff=0.9922;MQ=72.34;MQ0=0;MQRankSum=-7.150;QD=130.25;ReadPosRankSum=3.933;VQSLOD=2.7272;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,157,15233	0/0:6,0:6:18.06:0,18,1967	0/0:13,0:13:30.10:0,30,1366	0/0:10,0:10:24.08:0,24,912	0/0:24,0:24:72.25:0,72,7425	0/0:21,0:21:63.17:0,63,6407	0/0:23,0:23:69.24:0,69,6263	0/0:29,0:29:87.30:0,87,7146	0/0:13,0:13:39.13:0,39,3922	0/0:25,0:25:73.49:0,73,7402	0/0:22,0:22:63.22:0,63,6303	0/0:29,0:29:87.27:0,87,8063	0/0:24,0:24:72.25:0,72,7773	0/0:23,0:23:69.24:0,69,7035	0/0:27,0:27:81.26:0,81,7237	1/1:0,15:15:33.11:2228,33,0	0/0:38,0:38:99:0,114,11313	1/1:0,13:13:21.07:1418,21,0	0/0:14,0:14:42.14:0,42,3629	0/0:20,0:20:60.19:0,60,5779	0/0:34,0:34:99:0,102,9769	0/0:24,0:24:69.24:0,69,6762	0/0:18,0:18:54.19:0,54,5278	0/0:31,0:31:93.32:0,93,9339	0/0:22,0:22:66.23:0,66,6424	0/0:26,0:26:78.27:0,78,8454	0/0:22,0:22:66.21:0,66,6375	0/0:11,0:11:33.11:0,33,3625
chr10	16629729	.	AGAG	A	1827.67	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.960;DP=567;FS=7.208;HRun=0;HaplotypeScore=82.8746;InbreedingCoeff=0.9976;MQ=72.57;MQ0=0;MQRankSum=-3.183;QD=34.48;ReadPosRankSum=2.946;VQSLOD=3.8407;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:96.33:0,96,2121	0/0:10,0:10:27.09:0,27,611	0/0:24,0:22:54.17:0,54,1060	0/0:24,0:24:39.19:0,39,1135	0/0:15,0:15:45.14:0,45,954	0/0:18,0:18:45.15:0,45,1020	0/0:27,0:27:72.25:0,72,1629	0/0:20,0:20:51.16:0,51,1063	0/0:16,0:16:42.14:0,42,952	0/0:17,0:17:39.13:0,39,844	0/0:12,0:12:36.11:0,36,757	0/0:14,0:14:39.13:0,39,884	0/0:24,0:24:69.22:0,69,1516	0/0:22,0:22:63.20:0,63,1359	0/0:27,0:27:78.26:0,78,1726	1/1:1,23:24:54.18:899,54,0	0/0:24,0:24:69.22:0,69,1516	1/1:4,25:29:63.69:1050,64,0	0/0:17,0:17:45.15:0,45,960	0/0:20,0:20:60.21:0,60,1351	0/0:29,0:29:84.27:0,84,1860	0/0:12,0:12:36.12:0,36,815	0/0:10,0:10:27.08:0,27,570	0/0:32,0:32:93.31:0,93,2060	0/0:12,0:12:36.12:0,36,801	0/0:23,0:23:63.22:0,63,1424	0/0:24,0:23:72.25:0,72,1616	0/0:8,0:8:24.08:0,24,543
chr10	16630434	.	TTGATTGAC	T	1934.22	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=-7.514;DP=701;FS=2.629;HRun=0;HaplotypeScore=262.3719;InbreedingCoeff=0.3551;MQ=77.76;MQ0=0;MQRankSum=-1.532;QD=12.09;ReadPosRankSum=-2.700;VQSLOD=1.9508;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:40:80.65:0,81,671	0/0:8,0:8:20.92:0,21,161	0/1:26,0:22:6.41:6,0,499	0/1:39,0:31:9.32:9,0,447	0/0:22,0:22:41.74:0,42,365	0/0:21,0:21:53.83:0,54,515	0/0:26,0:26:52.07:0,52,449	0/1:21,0:20:49.25:49,0,367	0/0:33,0:33:83.36:0,83,683	0/1:20,0:20:19.18:19,0,390	0/0:17,0:17:20.91:0,21,285	0/0:30,0:30:47.82:0,48,371	0/0:33,0:33:74.67:0,75,622	0/0:37,0:37:80.71:0,81,671	0/0:28,0:28:65.75:0,66,508	1/1:2,19:21:34.02:1497,34,0	0/0:33,0:33:72.24:0,72,663	1/1:0,13:13:18.06:483,18,0	0/1:20,0:20:18.02:18,0,474	0/0:26,0:26:38.07:0,38,379	0/0:42,0:42:62.78:0,63,744	0/0:24,0:24:50.58:0,51,435	0/0:22,0:22:32.24:0,32,332	0/0:21,0:21:41.84:0,42,323	0/0:21,0:20:38.87:0,39,349	0/0:28,0:28:18.29:0,18,527	0/0:20,0:20:47.86:0,48,469	0/0:9,0:9:17.93:0,18,139
chr10	16631417	.	TA	T	437.03	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.221;DP=270;FS=0.943;HRun=7;HaplotypeScore=34.1883;InbreedingCoeff=0.5888;MQ=81.28;MQ0=1;MQRankSum=-2.886;QD=20.81;ReadPosRankSum=0.370;VQSLOD=2.5199;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:66.20:0,66,815	0/0:2,0:2:6.02:0,6,75	0/0:15,0:11:18.01:0,18,208	0/0:11,0:10:14.27:0,14,125	0/0:5,0:5:15.05:0,15,189	0/0:11,0:11:27.09:0,27,340	0/0:4,0:4:9.03:0,9,113	0/0:38,0:38:87.27:0,87,1083	0/0:4,0:4:12.04:0,12,150	0/0:10,0:10:27.09:0,27,340	0/0:12,0:12:27.09:0,27,339	0/0:3,0:3:9.03:0,9,113	0/0:1,0:1:3.01:0,3,38	0/0:2,0:2:6.02:0,6,75	0/0:5,0:5:15.05:0,15,189	1/1:0,3:3:9.02:92,9,0	0/0:20,0:20:57.13:0,57,686	1/1:1,17:18:13.38:453,13,0	0/0:18,0:18:54.15:0,54,664	0/0:5,0:5:15.05:0,15,187	0/0:3,0:3:6.02:0,6,75	0/0:3,0:3:6.01:0,6,62	0/0:5,0:5:15.03:0,15,175	0/0:2,0:2:6.02:0,6,75	0/0:17,0:17:45.14:0,45,558	0/0:15,0:15:36.09:0,36,438	0/0:11,0:11:27.09:0,27,340	0/0:4,0:4:6.02:0,6,75
chr10	16631448	.	T	TTG	557.95	PASS	AB=0.960;AC=22;AF=0.440;AN=50;BaseQRankSum=-1.091;DP=301;FS=1.415;HRun=0;HaplotypeScore=55.9041;InbreedingCoeff=0.2138;MQ=60.23;MQ0=8;MQRankSum=0.232;QD=3.49;ReadPosRankSum=-2.740;VQSLOD=1.1282;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:23:17.68:0,18,146	1/1:4,0:4:6.02:84,6,0	./.	./.	1/1:5,2:8:3.01:44,3,0	0/1:11,4:15:35.43:35,0,55	1/1:2,4:6:6.02:89,6,0	0/0:17,0:16:3.01:0,3,31	0/0:7,0:6:9.02:0,9,95	1/1:16,0:14:9.01:89,9,0	1/1:7,1:8:3.01:44,3,0	0/0:8,0:8:2.62:0,3,31	0/0:4,0:4:3.01:0,3,32	0/0:7,0:7:5.80:0,6,49	0/1:10,0:10:12.90:72,0,13	0/0:5,0:5:2.84:0,3,14	1/1:14,2:15:6.02:89,6,0	0/1:14,0:17:10.74:11,0,32	0/1:22,0:21:0:0,0,0	0/0:8,0:7:2.88:0,3,32	0/0:10,0:10:2.59:0,3,32	0/0:5,0:5:5.84:0,6,52	./.	0/1:9,0:9:13.52:14,0,114	0/0:17,0:17:6.01:0,6,65	1/1:13,0:13:7.36:57,7,0	0/1:9,0:8:11.97:43,0,12	1/1:6,0:5:3.01:37,3,0
chr10	16631947	.	CGTTTTTTTGTTTTT	C	1300.21	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.425;DP=580;FS=1.973;HRun=0;HaplotypeScore=204.7255;InbreedingCoeff=0.9676;MQ=63.09;MQ0=16;MQRankSum=-3.585;QD=52.01;ReadPosRankSum=2.582;VQSLOD=3.3865;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:78.31:0,78,4175	0/0:14,0:14:42.14:0,42,2077	0/0:40,0:14:22.38:0,22,515	0/0:31,0:8:10.53:0,11,195	0/0:30,0:30:81.22:0,81,3846	0/0:18,0:19:48.08:0,48,2310	0/0:22,0:22:66.20:0,66,3305	0/0:28,0:27:70.38:0,70,2649	0/0:18,0:18:48.10:0,48,2412	0/0:21,0:21:57.11:0,57,2823	0/0:15,0:15:42.10:0,42,2058	0/0:19,0:19:36.05:0,36,1275	0/0:14,0:14:36.02:0,36,1659	0/0:14,0:13:36.06:0,36,1785	0/0:15,0:15:45.11:0,45,1751	1/1:5,6:11:33.03:831,33,0	0/0:30,0:30:87.23:0,87,4111	1/1:1,13:14:15.05:588,15,0	0/0:32,0:30:87.19:0,87,3259	0/0:17,0:17:51.05:0,51,2239	0/0:11,0:10:27.04:0,27,857	0/0:20,0:20:60.15:0,60,3037	0/0:16,0:15:45.09:0,45,2220	0/0:16,0:16:45.15:0,45,2508	0/0:21,0:21:63.16:0,63,3451	0/0:27,0:26:78.11:0,78,3425	0/0:22,0:22:66.21:0,66,3346	0/0:10,0:10:30.10:0,30,1381
chr10	16631962	.	T	TG	1258.78	PASS	AB=0.924;AC=15;AF=0.268;AN=56;BaseQRankSum=0.441;DP=587;FS=71.620;HRun=0;HaplotypeScore=82.2323;InbreedingCoeff=0.6703;MQ=63.07;MQ0=20;MQRankSum=4.578;QD=6.95;ReadPosRankSum=2.684;VQSLOD=0.7259;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:95.13:0,95,866	1/1:12,1:13:17.53:135,18,0	0/0:48,0:11:21.96:0,22,121	0/1:37,0:11:17.73:18,0,27	0/0:39,0:39:91.33:0,91,767	0/0:26,0:26:51.94:0,52,432	0/0:18,0:18:49.50:0,50,421	0/0:24,0:23:46.67:0,47,434	0/0:17,0:17:43.24:0,43,401	1/1:19,1:20:24.10:259,24,0	0/1:12,5:17:52.54:116,0,53	0/0:14,0:14:23.55:0,24,166	0/0:12,0:12:28.25:0,28,271	0/0:17,0:16:38.17:0,38,344	0/1:12,0:12:5.84:6,0,59	0/0:8,0:8:18.42:0,18,73	1/1:30,0:30:0.63:201,1,0	0/0:20,0:20:24.40:0,24,109	0/0:26,0:24:69.98:0,70,589	0/0:16,0:16:47.97:0,48,490	0/0:8,0:7:18:0,18,162	0/0:16,0:16:46.24:0,46,415	0/0:19,0:18:49.58:0,50,423	0/0:18,0:18:49.45:0,49,460	0/0:25,0:25:74.06:0,74,660	1/1:17,3:19:16.15:271,16,0	1/1:20,1:21:40.81:337,41,0	1/1:10,1:11:7.24:96,7,0
chr10	16633098	.	A	ATATTATT	240.68	PASS	AB=0.750;AC=3;AF=0.058;AN=52;BaseQRankSum=-2.970;DP=234;FS=2.521;HRun=0;HaplotypeScore=54.5308;InbreedingCoeff=0.2756;MQ=74.80;MQ0=1;MQRankSum=-2.862;QD=20.06;ReadPosRankSum=0.657;VQSLOD=2.6946;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:24.07:0,24,520	0/0:5,0:5:15.05:0,15,358	0/0:2,0:3:2.53:0,3,69	0/0:15,0:9:3.16:0,3,16	0/0:5,0:5:12.03:0,12,234	0/0:9,0:9:15.05:0,15,358	0/0:4,0:4:9.03:0,9,191	0/0:32,0:32:78.25:0,78,1743	0/0:5,0:5:12.04:0,12,264	0/0:6,0:6:18.05:0,18,378	0/0:5,0:5:15.04:0,15,297	0/0:10,0:10:27.08:0,27,578	0/0:3,0:3:9.03:0,9,215	0/0:2,0:2:6.02:0,6,143	0/0:10,0:10:21.07:0,21,501	0/1:2,1:3:65.60:107,0,66	0/0:34,0:34:69.24:0,69,1629	1/1:5,4:9:6.02:226,6,0	0/0:11,0:11:20.55:0,21,446	0/0:8,0:8:21.05:0,21,384	0/0:1,0:1:3.01:0,3,72	./.	0/0:2,0:2:6.02:0,6,138	./.	0/0:15,0:15:36.11:0,36,804	0/0:5,0:5:15.05:0,15,358	0/0:8,0:8:18.06:0,18,420	0/0:13,0:13:30.10:0,30,685
chr10	16633306	.	A	AGG	450.87	PASS	AB=0.722;AC=9;AF=0.173;AN=52;BaseQRankSum=3.936;DP=410;FS=2.941;HRun=1;HaplotypeScore=79.2609;InbreedingCoeff=0.5742;MQ=87.67;MQ0=1;MQRankSum=-2.834;QD=6.26;ReadPosRankSum=1.958;VQSLOD=0.1740;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:93.30:0,93,1385	0/0:3,0:3:6.38:0,6,50	0/0:33,0:28:47.63:0,48,873	0/0:23,0:20:44.85:0,45,701	0/1:12,0:12:1.72:2,0,37	0/0:12,0:12:30.10:0,30,451	0/0:26,0:26:72.18:0,72,1011	0/0:15,0:15:24.38:0,24,293	1/1:4,3:8:11.93:160,12,0	0/0:13,0:13:26.68:0,27,256	./.	0/0:17,0:17:51.16:0,51,757	1/1:1,9:11:15:206,15,0	0/1:3,6:10:0.05:42,0,0	0/0:20,0:20:19.29:0,19,217	0/0:20,0:20:3.43:0,3,21	0/0:20,0:20:23.31:0,23,147	0/0:8,0:8:20.78:0,21,143	0/0:14,0:13:9.58:0,10,167	0/0:8,0:8:4.24:0,4,36	0/0:17,0:17:26.98:0,27,304	./.	1/1:4,5:9:3.01:47,3,0	0/1:6,15:21:2.25:130,0,2	0/0:4,2:6:2.74:0,3,21	0/0:9,0:8:11.66:0,12,111	0/0:17,0:17:11.18:0,11,214	0/0:19,0:19:15.40:0,15,168
chr10	16633308	.	A	AGG	3628.80	PASS	AB=0.926;AC=37;AF=0.712;AN=52;BaseQRankSum=-1.035;DP=410;FS=37.366;HRun=8;HaplotypeScore=77.2545;InbreedingCoeff=0.6729;MQ=89.83;MQ0=1;MQRankSum=-3.011;QD=13.75;ReadPosRankSum=2.210;VQSLOD=-0.5156;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:78.16:0,78,848	1/1:1,2:3:6.02:95,6,0	0/0:32,0:27:40.27:0,40,448	0/0:26,0:23:44.58:0,45,446	1/1:0,6:6:12:162,12,0	0/0:10,0:10:27.07:0,27,301	0/0:24,0:24:66.12:0,66,707	1/1:13,4:18:15.50:194,15,0	1/1:9,0:9:12:161,12,0	1/1:3,6:11:23.03:259,23,0	./.	0/0:18,0:18:45.05:0,45,479	1/1:14,0:14:15.47:209,15,0	1/1:11,0:11:3.01:47,3,0	1/1:4,16:22:29.58:418,30,0	0/1:20,0:20:4.49:26,0,4	1/1:5,17:22:33.11:518,33,0	0/1:8,0:8:2.84:3,0,31	0/1:10,4:13:3.95:274,0,4	1/1:2,2:5:8.47:76,8,0	1/1:8,7:18:17.03:208,17,0	./.	1/1:9,0:9:3.01:47,3,0	1/1:19,0:18:9.03:142,9,0	1/1:9,0:9:5.99:49,6,0	1/1:6,0:7:14.50:115,14,0	1/1:4,10:15:23.55:342,24,0	1/1:4,19:23:18.06:286,18,0
chr10	16633592	.	CTG	C	1511.50	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.884;DP=785;FS=15.662;HRun=0;HaplotypeScore=95.3479;InbreedingCoeff=0.9992;MQ=85.72;MQ0=0;MQRankSum=-1.950;QD=35.99;ReadPosRankSum=3.204;VQSLOD=4.9656;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,114,2105	0/0:9,0:9:27.09:0,27,498	0/0:30,0:30:81.28:0,81,1412	0/0:21,0:21:54.68:0,55,767	0/0:28,0:28:81.25:0,81,1446	0/0:28,0:28:84.29:0,84,1563	0/0:37,0:37:99:0,102,1838	0/0:27,0:27:69.20:0,69,1197	0/0:33,0:33:96.33:0,96,1797	0/0:42,0:42:99:0,123,2300	0/0:23,0:23:69.24:0,69,1269	0/0:22,0:22:66.17:0,66,1173	0/0:36,0:36:99:0,105,1947	0/0:37,0:37:99:0,102,1877	0/0:36,0:36:99:0,108,2008	1/1:1,24:25:63.21:927,63,0	0/0:35,0:35:99:0,105,1956	1/1:0,17:17:48.16:706,48,0	0/0:28,0:28:78.27:0,78,1446	0/0:20,0:20:60.19:0,60,1068	0/0:46,0:46:99:0,135,2461	0/0:25,0:25:72.24:0,72,1302	0/0:21,0:21:60.21:0,60,1120	0/0:20,0:20:57.16:0,57,1002	0/0:29,0:29:87.30:0,87,1621	0/0:33,0:33:96.32:0,96,1764	0/0:27,0:26:78.25:0,78,1428	0/0:11,0:11:30.10:0,30,561
chr10	16635026	.	ATAT	A	655.71	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.589;DP=452;FS=3.490;HRun=0;HaplotypeScore=63.3691;InbreedingCoeff=0.9409;MQ=60.19;MQ0=1;MQRankSum=-6.648;QD=31.22;ReadPosRankSum=1.379;VQSLOD=3.8580;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:49:99:0,135,2624	0/0:15,0:15:39.08:0,39,722	0/0:3,0:3:9:0,9,138	0/0:5,0:4:9.92:0,10,187	0/0:22,0:22:63.17:0,63,1204	0/0:16,0:16:48.16:0,48,1025	0/0:14,0:14:39.12:0,39,747	0/0:32,0:32:81.22:0,81,1640	0/0:17,0:17:51.12:0,51,924	0/0:17,0:17:51.10:0,51,903	0/0:17,0:17:45.14:0,45,863	0/0:14,0:14:36.09:0,36,718	0/0:14,0:14:42.13:0,42,892	0/0:20,0:20:57.13:0,57,1117	0/0:11,0:11:33.11:0,33,717	1/1:1,6:9:18.06:269,18,0	0/0:29,0:28:74.79:0,75,1457	1/1:1,10:12:30.10:506,30,0	0/0:12,0:12:36.09:0,36,718	0/0:20,0:20:57.15:0,57,1124	0/0:10,0:10:27.08:0,27,596	0/0:10,0:10:27.09:0,27,523	0/0:20,0:20:54.16:0,54,1158	0/0:13,0:13:36.04:0,36,588	0/0:16,0:16:45.14:0,45,937	0/0:11,0:11:30.10:0,30,640	0/0:15,0:14:42.12:0,42,811	0/0:9,0:9:27.06:0,27,515
chr10	16635132	.	CT	C	1352.69	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.306;DP=609;FS=3.724;HRun=4;HaplotypeScore=65.2019;InbreedingCoeff=0.9517;MQ=74.95;MQ0=0;MQRankSum=-2.328;QD=28.18;ReadPosRankSum=0.677;VQSLOD=3.1218;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:73,0:73:99:0,202,2771	0/0:9,0:9:24.08:0,24,336	0/0:11,1:12:7.06:0,7,367	0/0:11,0:11:30.10:0,30,407	0/0:21,0:21:57.19:0,57,798	0/0:22,0:22:57.19:0,57,798	0/0:21,0:21:63.20:0,63,866	0/0:22,0:22:51.17:0,51,714	0/0:15,0:15:45.14:0,45,615	0/0:22,0:22:57.19:0,57,798	0/0:15,0:15:45.13:0,45,600	0/0:18,0:18:51.17:0,51,714	0/0:12,0:12:36.12:0,36,504	0/0:25,0:25:72.20:0,72,986	0/0:17,0:17:45.15:0,45,630	1/1:0,16:16:42.13:504,42,0	0/0:51,0:51:99:0,150,2043	1/1:2,30:32:81.25:970,81,0	0/0:22,0:22:63.20:0,63,863	0/0:17,0:17:51.17:0,51,714	0/0:35,0:35:99:0,102,1380	0/0:11,0:11:30.09:0,30,399	0/0:10,0:10:30.10:0,30,420	0/0:30,0:30:87.25:0,87,1196	0/0:22,0:22:63.21:0,63,881	0/0:20,0:20:60.20:0,60,840	0/0:20,0:20:60.18:0,60,821	0/0:8,0:8:18.06:0,18,252
chr10	16637088	.	G	GC	783.67	PASS	AB=0.696;AC=13;AF=0.241;AN=54;BaseQRankSum=-1.026;DP=374;FS=6.967;HRun=11;HaplotypeScore=47.5176;InbreedingCoeff=0.0935;MQ=75.62;MQ0=0;MQRankSum=-0.011;QD=5.52;ReadPosRankSum=-0.439;VQSLOD=0.5890;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:38.80:0,39,298	0/1:2,2:5:17.24:18,0,17	0/0:13,0:11:5.59:0,6,84	0/1:15,1:16:3.56:99,0,4	0/1:4,7:11:28.44:103,0,28	0/0:11,0:11:26.88:0,27,207	0/0:13,0:13:29.86:0,30,232	0/0:12,0:12:14.91:0,15,116	0/0:15,0:15:29.85:0,30,229	0/1:8,7:15:44.98:102,0,45	1/1:7,2:9:5.59:60,6,0	0/0:14,0:14:20.89:0,21,162	0/0:9,0:10:16.97:0,17,122	0/0:16,0:16:29.85:0,30,232	0/1:5,6:10:11.21:79,0,11	0/1:7,5:12:34.45:49,0,34	1/1:5,11:16:18.01:175,18,0	0/1:6,5:11:31.44:76,0,31	0/0:15,0:16:23.64:0,24,167	0/0:11,0:11:17.88:0,18,139	0/0:19,0:19:23.85:0,24,182	0/0:8,0:9:16.95:0,17,120	0/0:10,0:10:8.87:0,9,69	0/0:23,0:25:45.84:0,46,336	0/0:13,0:14:37.87:0,38,280	0/1:9,5:16:18.55:20,0,19	0/1:7,13:20:19.43:159,0,19	./.
chr10	16637222	.	C	CCACCCACAGCCA	1681.38	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=0.231;DP=457;FS=0.000;HRun=0;HaplotypeScore=146.5757;InbreedingCoeff=0.8912;MQ=93.09;MQ0=0;MQRankSum=-5.317;QD=49.45;ReadPosRankSum=-0.363;VQSLOD=3.1942;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:84.02:0,84,2339	0/0:6,0:6:18.02:0,18,527	0/0:19,0:19:50.55:0,51,1162	0/0:22,0:22:57.76:0,58,1197	0/0:14,0:14:39.04:0,39,944	0/0:8,0:8:24.08:0,24,748	0/0:19,0:19:53.74:0,54,1725	0/0:28,0:28:80.92:0,81,2029	0/0:16,0:16:48.15:0,48,1569	0/0:7,0:7:21.07:0,21,561	0/0:13,0:13:35.98:0,36,858	0/0:15,0:15:45.09:0,45,1338	0/0:10,0:10:27.01:0,27,797	0/0:18,0:18:54.06:0,54,1670	0/0:7,0:7:21.03:0,21,634	1/1:0,7:8:3.01:187,3,0	0/0:30,0:30:90.25:0,90,2917	1/1:5,11:26:27.09:1603,27,0	0/0:18,0:18:51.05:0,51,1504	0/0:11,0:11:30.08:0,30,831	0/0:28,0:28:84.27:0,84,2824	0/0:17,0:17:44.93:0,45,1171	0/0:17,0:17:48.09:0,48,1297	0/0:23,0:23:63.14:0,63,1938	0/0:11,0:11:33.07:0,33,922	0/0:15,0:15:42.12:0,42,1363	0/0:13,0:13:36.12:0,36,1185	0/0:10,0:10:27.09:0,27,833
chr10	16638860	.	T	TG	860.51	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-5.823;DP=471;FS=0.771;HRun=6;HaplotypeScore=45.7613;InbreedingCoeff=0.8070;MQ=80.23;MQ0=0;MQRankSum=-0.876;QD=28.68;ReadPosRankSum=0.561;VQSLOD=3.8829;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,102,1041	0/0:5,0:5:15.03:0,15,153	0/0:15,0:15:0.38:0,0,241	0/0:14,0:13:27.03:0,27,264	0/0:23,0:23:62.17:0,62,618	0/0:15,0:15:45.10:0,45,459	0/0:13,0:13:30.06:0,30,306	0/0:29,0:29:75.15:0,75,760	0/0:15,0:15:39.06:0,39,384	0/0:15,0:15:39.09:0,39,398	0/0:20,0:20:51.11:0,51,520	0/0:16,0:16:45.10:0,45,459	0/0:14,0:14:30.06:0,30,306	0/0:11,0:11:27.06:0,27,275	0/0:12,0:12:24.05:0,24,245	1/1:1,12:13:33.11:415,33,0	0/0:22,0:22:60.10:0,60,603	1/1:2,15:17:45.14:566,45,0	0/0:15,0:15:36.08:0,36,367	0/0:35,0:35:99:0,102,1040	0/0:24,0:24:60.11:0,60,605	0/0:10,0:10:27.06:0,27,276	0/0:12,0:12:33.07:0,33,336	0/0:13,0:13:36.08:0,36,367	0/0:15,0:15:45.08:0,45,452	0/0:20,0:20:51.11:0,51,520	0/0:22,0:22:66.15:0,66,673	0/0:1,0:1:3.01:0,3,31
chr10	16638955	.	TTGCTTGCTTGCTTG	T	1309.46	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.345;DP=555;FS=10.049;HRun=0;HaplotypeScore=208.0261;InbreedingCoeff=0.9950;MQ=66.86;MQ0=4;MQRankSum=-7.777;QD=48.50;ReadPosRankSum=2.759;VQSLOD=2.2648;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:63.22:0,63,2724	0/0:9,0:9:24.08:0,24,1200	0/0:17,0:13:34:0,34,823	0/0:17,0:12:36.12:0,36,1347	0/0:24,0:23:69.24:0,69,3397	0/0:12,0:12:33.11:0,33,1512	0/0:34,0:34:99:0,99,4432	0/0:28,0:27:81.27:0,81,3192	0/0:15,0:15:39.11:0,39,1791	0/0:26,0:26:78.26:0,78,3192	0/0:12,0:12:36.12:0,36,1670	0/0:24,0:24:72.25:0,72,3911	0/0:22,0:22:66.23:0,66,2998	0/0:13,0:13:36.59:0,37,1573	0/0:8,0:8:24.08:0,24,1069	1/1:14,5:19:23.33:1023,23,0	0/0:23,0:23:57.20:0,57,2904	1/1:7,1:8:23.74:406,24,0	0/0:23,0:21:63.21:0,63,2638	0/0:17,0:17:51.18:0,51,2291	0/0:23,0:22:66.23:0,66,3039	0/0:12,0:12:36.12:0,36,1756	0/0:29,0:29:87.28:0,87,3539	0/0:32,0:31:81.27:0,81,3899	0/0:18,0:18:54.19:0,54,2401	0/0:18,0:18:54.19:0,54,2414	0/0:19,0:19:54.17:0,54,2647	0/0:31,0:30:90.31:0,90,4911
chr10	16639051	.	C	CT	208.67	PASS	AB=0.889;AC=5;AF=0.089;AN=56;BaseQRankSum=5.675;DP=427;FS=2.308;HRun=2;HaplotypeScore=50.7161;InbreedingCoeff=0.3355;MQ=49.96;MQ0=47;MQRankSum=-3.896;QD=3.94;ReadPosRankSum=-0.376;VQSLOD=0.3414;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:16:35.40:0,35,418	0/0:9,0:9:9.03:0,9,111	0/0:13,0:3:3.01:0,3,37	0/1:9,0:6:14.69:15,0,63	0/0:11,0:10:30.09:0,30,361	0/0:20,0:19:47.89:0,48,569	0/0:24,0:17:40.11:0,40,535	0/0:25,0:16:33.44:0,33,387	0/0:23,0:17:39.10:0,39,460	0/0:7,0:7:18.06:0,18,223	0/0:9,0:9:15.85:0,16,166	0/0:17,0:16:32.94:0,33,362	0/0:18,0:16:39.59:0,40,482	0/0:17,0:14:36.58:0,37,449	0/0:13,0:12:27.08:0,27,333	1/1:5,6:9:23.98:245,24,0	0/0:23,0:22:39.12:0,39,477	0/1:3,3:4:5.79:59,0,6	0/0:19,0:10:24.07:0,24,293	0/0:13,0:13:24.08:0,24,296	0/0:17,0:13:27.46:0,27,292	0/0:14,0:14:22.88:0,23,265	0/0:11,0:10:15.05:0,15,184	0/1:27,0:24:8.13:8,0,302	0/0:15,0:12:21.05:0,21,245	0/0:19,0:18:54.02:0,54,618	0/0:10,0:8:18.06:0,18,222	0/0:9,0:9:2.90:0,3,37
chr10	16639516	.	A	AT	865.70	PASS	AB=0.904;AC=6;AF=0.107;AN=56;BaseQRankSum=-1.753;DP=557;FS=0.599;HRun=10;HaplotypeScore=61.3532;InbreedingCoeff=0.5773;MQ=76.32;MQ0=0;MQRankSum=-2.383;QD=11.10;ReadPosRankSum=-1.259;VQSLOD=2.5647;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:32:86.88:0,87,714	0/0:3,0:4:11.03:0,11,80	0/0:14,0:14:22.29:0,22,169	0/0:16,0:17:20.85:0,21,153	0/0:23,1:24:30.92:0,31,457	0/1:18,2:21:14.01:14,0,301	0/0:15,0:16:43.96:0,44,347	0/0:24,0:24:33.22:0,33,355	0/0:20,1:21:21.93:0,22,386	0/0:24,0:25:70.96:0,71,572	0/0:21,0:21:50.91:0,51,415	0/1:15,2:17:19.04:19,0,275	0/0:12,0:12:32.96:0,33,271	0/0:23,0:24:55.95:0,56,449	0/0:18,0:18:53.88:0,54,435	1/1:2,19:21:51.13:544,51,0	0/0:28,0:29:64.95:0,65,523	1/1:3,16:19:20.47:423,20,0	0/0:12,0:15:30.07:0,30,215	0/0:28,0:28:71.89:0,72,590	0/0:17,0:19:42.98:0,43,329	0/0:21,0:21:44.06:0,44,367	0/0:19,0:19:53.93:0,54,443	0/0:13,0:13:5.01:0,5,196	0/0:17,0:17:10.22:0,10,245	0/0:22,0:22:50.93:0,51,419	0/0:31,0:30:24.98:0,25,472	0/0:13,0:13:32.93:0,33,271
chr10	16640220	.	AC	A	260.08	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=3.018;DP=162;FS=6.578;HRun=5;HaplotypeScore=18.4000;InbreedingCoeff=0.5132;MQ=88.42;MQ0=4;MQRankSum=-1.742;QD=16.26;ReadPosRankSum=2.477;VQSLOD=1.5691;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:8:18.06:0,18,245	0/0:1,0:1:3:0,3,25	0/0:9,0:8:13.75:0,14,145	0/0:16,0:11:20.93:0,21,223	0/0:5,0:5:11.94:0,12,124	0/0:1,0:1:3:0,3,25	0/0:10,0:10:24.03:0,24,276	0/0:8,0:7:15.02:0,15,172	0/0:5,0:5:15.04:0,15,189	0/0:5,0:5:12.04:0,12,153	0/0:5,0:5:12.03:0,12,148	0/0:8,0:8:15.05:0,15,205	0/0:6,0:6:18.06:0,18,246	0/0:1,0:1:3.01:0,3,41	0/0:4,0:4:12.01:0,12,132	1/1:0,5:5:12.03:136,12,0	0/0:12,0:11:27.09:0,27,365	1/1:4,7:10:21.06:237,21,0	0/0:6,0:6:15.05:0,15,203	0/0:6,0:6:15.05:0,15,205	0/0:2,0:2:3.01:0,3,41	0/0:3,0:3:5.63:0,6,66	0/0:9,0:9:27:0,27,345	0/0:6,0:6:18.02:0,18,224	0/0:2,0:2:6.02:0,6,81	0/0:3,0:3:6.02:0,6,82	0/0:4,0:4:12.04:0,12,164	0/0:1,0:1:3.01:0,3,41
chr10	16640291	.	T	TGT	958.57	PASS	AB=1.000;AC=17;AF=0.386;AN=44;BaseQRankSum=-0.244;DP=99;FS=0.000;HRun=0;HaplotypeScore=15.4875;InbreedingCoeff=0.5368;MQ=64.22;MQ0=4;MQRankSum=-0.330;QD=29.05;ReadPosRankSum=0.301;VQSLOD=3.5233;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:5:9.03:0,9,112	1/1:2,0:2:3.01:47,3,0	0/0:5,0:4:8.94:0,9,92	./.	1/1:3,0:3:3.01:46,3,0	0/0:3,0:3:9.02:0,9,100	0/0:1,0:1:3.01:0,3,38	0/0:11,0:11:32.93:0,33,374	0/1:3,0:3:29.35:29,0,31	1/1:7,0:6:18.06:295,18,0	1/1:4,0:4:12.04:187,12,0	0/0:2,0:2:3.01:0,3,37	./.	./.	1/1:1,0:1:3.01:47,3,0	0/0:2,0:2:5.68:0,6,29	1/1:7,0:7:15.05:209,15,0	0/0:5,0:5:2.92:0,3,17	./.	0/0:3,0:3:9.03:0,9,112	0/0:1,0:1:3.01:0,3,38	./.	0/0:4,0:4:12.02:0,12,137	0/0:3,0:3:6.02:0,6,75	0/0:2,0:2:3.01:0,3,36	1/1:4,0:4:12.03:163,12,0	1/1:2,0:2:6.02:90,6,0	./.
chr10	16640413	.	AGT	A	1975.01	PASS	AC=48;AF=1.000;AN=48;BaseQRankSum=1.686;DP=305;FS=0.000;HRun=0;HaplotypeScore=44.1357;InbreedingCoeff=-0.0711;MQ=55.28;MQ0=17;MQRankSum=1.132;QD=7.37;ReadPosRankSum=1.640;VQSLOD=2.8804;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:17,5:20:5.85:47,6,0	./.	./.	./.	1/1:8,0:9:8.65:60,9,0	1/1:5,5:11:8.86:80,9,0	1/1:7,2:9:6.02:66,6,0	1/1:22,4:24:8.97:76,9,0	1/1:4,5:9:6.02:66,6,0	1/1:4,4:8:9:87,9,0	1/1:4,2:6:6.49:66,6,0	1/1:3,1:4:6.02:66,6,0	1/1:4,0:4:2.99:23,3,0	1/1:8,0:8:8.87:72,9,0	1/1:3,8:11:15.04:164,15,0	1/1:0,0:8:19.89:98,20,0	1/1:9,8:17:11.98:131,12,0	1/1:9,0:10:2.84:14,3,0	1/1:10,1:9:3.01:33,3,0	1/1:6,1:7:3.01:33,3,0	1/1:9,8:17:11.90:114,12,0	./.	1/1:3,2:4:3.01:33,3,0	1/1:6,10:15:18.05:197,18,0	1/1:7,4:11:6.01:66,6,0	1/1:14,8:22:22.29:249,22,0	1/1:6,0:5:2.96:19,3,0	1/1:1,5:8:20.72:192,21,0
chr10	16640540	.	C	CA	1133.61	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-4.684;DP=451;FS=14.912;HRun=1;HaplotypeScore=44.8875;InbreedingCoeff=0.9515;MQ=99.17;MQ0=0;MQRankSum=-4.396;QD=35.43;ReadPosRankSum=-0.758;VQSLOD=1.6663;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:93.30:0,93,1207	0/0:3,0:3:9.03:0,9,117	0/0:24,0:24:62.51:0,63,829	0/0:24,0:25:51.97:0,52,786	0/0:14,0:14:42.14:0,42,544	0/0:15,0:15:42.14:0,42,545	0/0:18,0:17:54.17:0,54,688	0/0:20,0:20:54.16:0,54,677	0/0:12,0:12:36.12:0,36,467	0/0:14,0:14:42.13:0,42,534	0/0:4,0:4:12.04:0,12,156	0/0:11,0:11:33.10:0,33,416	0/0:8,0:8:24.06:0,24,295	0/0:8,0:8:24.08:0,24,312	0/0:16,0:16:48.16:0,48,623	1/1:0,17:17:48.13:695,48,0	0/0:31,0:31:87.27:0,87,1114	1/1:0,15:15:39.10:560,39,0	0/0:12,0:12:36.12:0,36,467	0/0:14,0:14:42.14:0,42,545	0/0:37,0:37:99:0,105,1348	0/0:9,0:9:24.08:0,24,312	0/0:11,0:11:33.11:0,33,428	0/0:21,0:21:60.18:0,60,766	0/0:8,0:8:24.08:0,24,312	0/0:17,0:17:48.14:0,48,609	0/0:25,0:25:75.23:0,75,956	0/0:11,0:11:33.09:0,33,413
chr10	16641153	.	GGCAGCA	G	1000.96	PASS	AC=12;AF=0.600;AN=20;BaseQRankSum=0.032;DP=377;FS=0.000;HRun=0;HaplotypeScore=82.1326;InbreedingCoeff=0.8438;MQ=62.90;MQ0=15;MQRankSum=-5.638;QD=7.31;ReadPosRankSum=1.723;VQSLOD=1.6594;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	./.	./.	0/0:43,0:43:21.07:0,21,508	./.	1/1:12,4:16:6.02:109,6,0	./.	./.	0/0:20,0:21:8.96:0,9,187	1/1:16,3:18:6:119,6,0	1/1:15,6:20:12.04:203,12,0	1/1:5,6:11:15.05:270,15,0	0/0:19,0:19:15.05:0,15,429	1/1:22,9:33:12.04:203,12,0	0/0:20,0:20:30.57:0,31,847	./.	./.	./.	./.	./.	1/1:26,10:36:11.77:212,12,0	./.	./.	./.	./.
chr10	16642028	.	A	AAAG	1615.22	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=1.724;DP=593;FS=11.017;HRun=0;HaplotypeScore=84.7249;InbreedingCoeff=0.9798;MQ=68.56;MQ0=0;MQRankSum=-2.379;QD=47.51;ReadPosRankSum=0.730;VQSLOD=5.4408;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,160,2548	0/0:15,0:15:45.15:0,45,733	0/0:8,0:6:12.04:0,12,202	0/0:7,0:7:18.05:0,18,255	0/0:24,0:24:69.21:0,69,1110	0/0:13,0:13:33.10:0,33,531	0/0:35,0:35:99:0,102,1608	0/0:33,0:33:93.28:0,93,1435	0/0:23,0:23:66.21:0,66,1060	0/0:23,0:23:63.18:0,63,923	0/0:16,0:16:39.13:0,39,635	0/0:19,0:19:57.17:0,57,887	0/0:17,0:17:51.13:0,51,756	0/0:19,0:19:54.14:0,54,792	0/0:28,0:28:84.18:0,84,1262	1/1:0,18:18:45.15:944,45,0	0/0:23,0:23:69.22:0,69,1133	1/1:0,16:16:39.13:793,39,0	0/0:14,0:14:39.10:0,39,582	0/0:24,0:24:66.21:0,66,1065	0/0:23,0:23:66.21:0,66,1085	0/0:14,0:14:42.08:0,42,624	0/0:21,0:21:63.19:0,63,965	0/0:23,0:23:69.16:0,69,1069	0/0:27,0:27:75.04:0,75,1203	0/0:21,0:21:63.18:0,63,926	0/0:24,0:24:69.21:0,69,1088	0/0:10,0:10:30.09:0,30,464
chr10	16644868	.	GATTT	G	2005.50	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.186;DP=700;FS=2.019;HRun=0;HaplotypeScore=113.1301;InbreedingCoeff=0.9916;MQ=61.17;MQ0=0;MQRankSum=1.143;QD=43.60;ReadPosRankSum=1.874;VQSLOD=4.4020;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,141,3504	0/0:18,0:18:51.15:0,51,1273	0/0:22,0:21:60.20:0,60,1448	0/0:8,0:8:14.92:0,15,455	0/0:31,0:31:90.27:0,90,2286	0/0:25,0:25:66.21:0,66,1624	0/0:25,0:25:60.19:0,60,1518	0/0:36,0:36:90.31:0,90,2346	0/0:17,0:17:48.16:0,48,1205	0/0:31,0:31:90.26:0,90,2090	0/0:20,0:20:51.14:0,51,1274	0/0:15,0:15:45.15:0,45,1127	0/0:21,0:21:57.13:0,57,1378	0/0:21,0:21:57.20:0,57,1484	0/0:25,0:25:63.20:0,63,1597	1/1:1,16:17:45.15:818,45,0	0/0:30,0:30:84.29:0,84,2194	1/1:3,26:29:72.25:1309,72,0	0/0:19,0:19:51.18:0,51,1310	0/0:31,0:31:90.20:0,90,2133	0/0:22,0:22:60.21:0,60,1572	0/0:28,0:28:75.25:0,75,1912	0/0:36,0:36:99:0,99,2538	0/0:19,0:19:54.09:0,54,1242	0/0:28,0:28:72.21:0,72,1826	0/0:29,0:29:84.28:0,84,2144	0/0:30,0:30:78.27:0,78,2038	0/0:16,0:16:42.12:0,42,989
chr10	16645247	.	A	AATGT	8660.28	PASS	AB=0.706;AC=38;AF=0.731;AN=52;BaseQRankSum=-4.340;DP=834;FS=0.000;HRun=0;HaplotypeScore=151.6442;InbreedingCoeff=0.6836;MQ=63.91;MQ0=6;MQRankSum=-0.901;QD=14.96;ReadPosRankSum=-1.857;VQSLOD=3.7535;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:41:45.13:0,45,640	1/1:13,9:22:21.07:491,21,0	./.	./.	1/1:14,14:28:30.10:683,30,0	0/0:28,0:29:45.15:0,45,672	0/0:38,0:38:27.09:0,27,414	1/1:37,0:37:7.18:43,7,0	1/1:13,0:23:21:274,21,0	1/1:21,12:34:11.26:764,11,0	1/1:10,10:20:5.17:600,5,0	0/0:33,0:33:69.20:0,69,998	1/1:8,1:25:24.03:391,24,0	1/1:15,1:31:24.03:358,24,0	1/1:8,23:32:39.13:911,39,0	0/0:25,0:24:36.11:0,36,532	0/1:22,12:34:46.92:463,0,47	0/0:19,0:19:24.04:0,24,335	1/1:25,0:24:6.02:113,6,0	1/1:24,2:36:15.44:188,15,0	1/1:17,5:25:12.04:259,12,0	1/1:13,0:28:16.94:132,17,0	1/1:19,0:27:2.97:20,3,0	1/1:17,1:30:0.47:1,0,0	1/1:15,2:34:33:473,33,0	1/1:12,20:32:63.22:1430,63,0	0/1:19,18:37:93.12:796,0,93	1/1:12,7:19:12.04:270,12,0
chr10	16645305	.	CCA	C	1621.18	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=4.589;DP=723;FS=1.304;HRun=0;HaplotypeScore=126.8317;InbreedingCoeff=0.9978;MQ=70.45;MQ0=0;MQRankSum=-0.805;QD=38.60;ReadPosRankSum=2.352;VQSLOD=5.5296;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,126,2341	0/0:16,0:16:45.14:0,45,811	0/0:26,0:23:63.19:0,63,1121	0/0:22,0:19:51.12:0,51,830	0/0:28,0:28:81.26:0,81,1443	0/0:28,0:28:81.28:0,81,1506	0/0:21,0:21:63.20:0,63,1147	0/0:33,0:33:90.30:0,90,1649	0/0:29,0:29:78.27:0,78,1437	0/0:32,0:32:90.29:0,90,1610	0/0:19,0:19:54.19:0,54,998	0/0:33,0:33:99:0,99,1823	0/0:31,0:31:69.22:0,69,1260	0/0:31,0:31:72.25:0,72,1345	0/0:27,0:27:63.20:0,63,1149	1/1:0,25:25:72.24:1060,72,0	0/0:25,0:24:75.24:0,75,1358	1/1:0,17:17:48.12:683,48,0	0/0:18,0:18:54.19:0,54,1002	0/0:19,0:19:48.16:0,48,893	0/0:41,0:41:99:0,105,1945	0/0:29,0:29:56.93:0,57,1011	0/0:20,0:20:51.15:0,51,910	0/0:24,0:24:35.81:0,36,674	0/0:26,0:26:51.17:0,51,954	0/0:26,0:26:78.27:0,78,1461	0/0:27,0:27:69.24:0,69,1284	0/0:7,0:7:21.07:0,21,393
chr10	16645740	.	T	TGAGAAAGAGAGAGA	2620.85	PASS	AB=0.986;AC=22;AF=0.393;AN=56;BaseQRankSum=9.519;DP=532;FS=2.329;HRun=0;HaplotypeScore=200.4081;InbreedingCoeff=-0.5255;MQ=59.66;MQ0=12;MQRankSum=-4.407;QD=6.83;ReadPosRankSum=-5.449;VQSLOD=0.6433;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:36,0:36:6.95:7,0,258	0/0:8,0:8:18.45:0,18,150	0/0:29,0:21:22.58:0,23,250	0/0:34,0:12:14.70:0,15,121	0/1:15,0:15:30.56:83,0,31	0/0:14,0:14:18.02:0,18,346	0/0:28,0:28:67.95:0,68,895	0/1:13,0:12:41.68:42,0,89	0/1:18,0:18:99:123,0,183	0/1:23,0:23:39.15:558,0,39	0/1:18,0:16:36.93:37,0,41	0/0:17,0:17:17.60:0,18,163	0/1:19,0:19:96.56:97,0,161	0/1:23,0:22:99:239,0,119	0/1:22,0:22:23.81:24,0,148	0/1:14,0:14:34.44:128,0,34	0/1:15,7:25:99:248,0,170	0/1:14,0:14:99:166,0,101	0/1:18,0:17:81.33:81,0,139	0/0:18,0:17:2.79:0,3,176	0/1:15,0:14:40.10:55,0,40	0/1:13,0:13:20.60:21,0,62	0/1:13,0:13:39.12:39,0,81	1/1:26,0:24:6.02:122,6,0	0/1:13,0:13:10.54:11,0,86	0/1:19,0:19:77.78:443,0,78	0/1:15,0:15:99:162,0,110	0/1:12,0:12:97:97,0,113
chr10	16645745	.	A	AAGAGAGAG	4203.70	PASS	AB=1.000;AC=47;AF=0.904;AN=52;BaseQRankSum=2.084;DP=557;FS=20.605;HRun=0;HaplotypeScore=147.8215;InbreedingCoeff=0.3581;MQ=58.12;MQ0=15;MQRankSum=-0.295;QD=8.79;ReadPosRankSum=0.586;VQSLOD=1.0827;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:35,0:36:9.03:195,9,0	0/1:7,0:7:0:0,0,0	./.	./.	1/1:20,0:21:18.03:230,18,0	0/0:16,0:17:14.20:0,14,211	0/1:26,0:26:3.97:4,0,345	1/1:14,0:13:12.04:144,12,0	1/1:19,0:19:16.85:234,17,0	1/1:25,0:25:48.95:659,49,0	1/1:17,0:15:6.01:72,6,0	0/1:18,0:19:5.14:38,0,5	1/1:11,0:20:6.02:72,6,0	1/1:20,0:21:17.56:257,18,0	1/1:22,0:23:11.96:143,12,0	1/1:12,0:12:14.92:220,15,0	1/1:25,0:26:3.01:104,3,0	1/1:13,0:13:17.52:224,18,0	1/1:24,0:23:11.68:114,12,0	1/1:19,0:18:9.28:89,9,0	1/1:17,0:16:8.99:121,9,0	1/1:12,0:11:9.02:110,9,0	1/1:15,0:15:5.74:88,6,0	1/1:7,18:27:6.02:171,6,0	1/1:12,0:12:5.84:75,6,0	1/1:16,0:16:27.07:347,27,0	1/1:17,0:17:24.02:255,24,0	1/1:17,0:15:20.29:240,20,0
chr10	16645786	.	AGC	A	657.90	PASS	AB=1.000;AC=12;AF=0.214;AN=56;BaseQRankSum=5.087;DP=575;FS=4.881;HRun=0;HaplotypeScore=98.3014;InbreedingCoeff=0.3294;MQ=64.01;MQ0=15;MQRankSum=-0.804;QD=4.19;ReadPosRankSum=-4.723;VQSLOD=0.5011;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,6:28:53.65:0,54,524	0/0:11,0:11:14.11:0,14,92	0/0:27,0:12:15.85:0,16,141	0/0:40,0:15:21.11:0,21,181	0/1:25,0:23:21.57:22,0,170	0/0:16,0:16:18.32:0,18,315	0/0:27,0:27:13.13:0,13,607	0/0:30,0:28:36.14:0,36,358	0/0:15,0:15:24.63:0,25,163	0/0:33,0:33:5.43:0,5,371	0/1:12,0:12:7.39:7,0,75	0/0:22,0:22:5.73:0,6,322	0/0:15,0:15:3.98:0,4,146	0/1:19,0:19:25.24:25,0,188	0/1:16,0:16:1.32:1,0,96	1/1:17,0:17:9.82:225,10,0	0/0:20,0:20:24.26:0,24,266	1/1:18,0:18:29.55:290,30,0	0/0:19,0:18:19.88:0,20,214	0/0:20,0:19:31.55:0,32,280	0/0:22,0:22:12.37:0,12,248	1/1:18,0:17:18.12:219,18,0	0/0:14,0:14:13.80:0,14,90	0/0:35,0:35:41.75:0,42,351	0/1:15,0:14:17:17,0,162	0/1:17,0:17:8.53:9,0,247	0/0:12,0:11:21.27:0,21,191	0/0:12,0:10:14.41:0,14,104
chr10	16647039	.	G	GT	311.49	PASS	AB=0.757;AC=2;AF=0.036;AN=56;BaseQRankSum=7.951;DP=993;FS=0.848;HRun=1;HaplotypeScore=128.5942;InbreedingCoeff=-0.0370;MQ=59.25;MQ0=10;MQRankSum=-4.148;QD=5.56;ReadPosRankSum=-1.579;VQSLOD=-0.1402;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:60,0:60:99:0,159,2140	0/0:18,0:18:51.17:0,51,709	0/0:58,0:34:53.20:0,53,1161	0/0:75,1:39:86.33:0,86,1181	0/0:24,0:24:72.24:0,72,1001	0/0:33,0:33:59.24:0,59,1141	0/0:35,0:35:99:0,102,1400	0/0:45,0:43:86.69:0,87,1632	0/0:41,0:41:99:0,120,1659	0/0:23,0:23:66.20:0,66,879	0/0:21,0:21:63.21:0,63,881	0/0:35,0:35:99:0,99,1349	0/0:33,0:33:96.32:0,96,1340	0/0:34,0:34:99:0,99,1362	0/0:36,0:36:99:0,105,1448	0/1:27,9:35:99:160,0,435	0/0:30,0:30:48.81:0,49,1111	0/1:11,7:20:99:240,0,277	0/0:26,0:26:32:0,32,787	0/0:28,0:28:84.20:0,84,1131	0/0:51,0:49:99:0,132,1842	0/0:32,0:32:93.30:0,93,1279	0/0:33,0:33:99:0,99,1362	0/0:49,2:51:99:0,129,1800	0/0:21,0:21:63.12:0,63,818	0/0:42,0:41:99:0,123,1695	0/0:26,0:26:78.25:0,78,1072	0/0:23,0:23:69.23:0,69,957
chr10	16647058	.	GA	G	377.05	PASS	AB=0.754;AC=2;AF=0.036;AN=56;BaseQRankSum=7.696;DP=963;FS=2.941;HRun=1;HaplotypeScore=126.1303;InbreedingCoeff=-0.0371;MQ=61.77;MQ0=10;MQRankSum=-6.131;QD=6.86;ReadPosRankSum=-0.238;VQSLOD=0.5376;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:57,1:58:99:0,131,2256	0/0:21,0:21:54.18:0,54,863	0/0:57,1:37:99:0,102,1545	0/0:68,0:51:99:0,131,1840	0/0:24,0:24:71.98:0,72,1107	0/0:33,1:34:67.37:0,67,1428	0/0:34,0:34:99:0,99,1579	0/0:46,1:46:99:0,111,2063	0/0:39,0:39:99:0,114,1790	0/0:23,0:23:69.24:0,69,1103	0/0:22,0:22:63.20:0,63,981	0/0:30,0:30:90.03:0,90,1379	0/0:29,0:29:84.71:0,85,1315	0/0:31,0:31:93.32:0,93,1486	0/0:39,0:39:99:0,114,1799	0/1:22,14:36:99:261,0,283	0/0:34,1:35:99:0,99,1552	0/1:13,5:18:99:205,0,281	0/0:26,1:27:27.34:0,27,971	0/0:28,0:28:78.27:0,78,1246	0/0:47,0:45:99:0,117,1847	0/0:28,0:28:84.29:0,84,1342	0/0:29,0:29:87.27:0,87,1340	0/0:49,0:50:99:0,135,2145	0/0:19,0:19:51.17:0,51,815	0/0:42,0:41:99:0,123,1944	0/0:24,0:24:69.23:0,69,1098	0/0:22,0:22:66.22:0,66,1039
chr10	16647359	.	G	GAC	865.04	PASS	AB=0.712;AC=3;AF=0.054;AN=56;BaseQRankSum=9.907;DP=832;FS=22.757;HRun=0;HaplotypeScore=126.1053;InbreedingCoeff=0.6173;MQ=78.77;MQ0=0;MQRankSum=-7.581;QD=17.30;ReadPosRankSum=0.107;VQSLOD=1.8663;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,114,1819	0/0:14,0:14:39.13:0,39,636	0/0:24,0:24:33.94:0,34,791	0/0:19,0:19:37.38:0,37,627	0/0:23,0:23:66.23:0,66,1076	0/0:27,0:27:81.28:0,81,1321	0/0:26,0:26:75.26:0,75,1216	0/0:23,0:23:69.24:0,69,1122	0/0:39,0:39:99:0,117,1908	0/0:27,0:27:78.27:0,78,1270	0/0:20,0:20:60.20:0,60,972	0/0:36,0:36:99:0,105,1684	0/0:25,0:25:72.23:0,72,1139	0/0:46,0:46:99:0,138,2225	0/0:30,0:30:87.30:0,87,1416	0/1:22,15:37:70.66:643,0,71	0/0:51,0:51:99:0,153,2434	1/1:8,5:13:11.64:321,12,0	0/0:18,0:18:54.18:0,54,842	0/0:21,0:21:63.20:0,63,1000	0/0:88,0:88:99:0,259,4145	0/0:21,0:21:63.22:0,63,1023	0/0:21,0:21:63.22:0,63,1022	0/0:57,0:57:99:0,166,2660	0/0:19,0:19:57.19:0,57,925	0/0:24,0:24:72.24:0,72,1154	0/0:22,0:22:66.21:0,66,1044	0/0:21,0:21:63.22:0,63,1027
chr10	16647361	.	G	GAC	72.64	PASS	AB=0.717;AC=2;AF=0.036;AN=56;BaseQRankSum=8.472;DP=833;FS=21.671;HRun=0;HaplotypeScore=125.3160;InbreedingCoeff=-0.0365;MQ=78.31;MQ0=0;MQRankSum=-6.528;QD=1.45;ReadPosRankSum=1.771;VQSLOD=1.1147;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,111,1799	0/0:14,0:14:42.12:0,42,657	0/0:24,0:24:63.15:0,63,903	0/0:17,1:18:13.96:0,14,663	0/0:22,0:22:66.23:0,66,1076	0/0:27,0:27:81.28:0,81,1322	0/0:26,0:26:75.26:0,75,1216	0/0:25,0:25:72.19:0,72,1080	0/0:40,0:40:99:0,120,1934	0/0:28,0:28:81.26:0,81,1277	0/0:20,0:20:60.20:0,60,973	0/0:36,0:36:99:0,108,1750	0/0:26,0:26:72.25:0,72,1160	0/0:47,0:47:99:0,138,2247	0/0:29,0:29:87.30:0,87,1416	0/1:22,15:37:48.13:120,0,48	0/0:51,0:51:99:0,151,2442	0/1:8,5:13:28.90:41,0,29	0/0:17,0:17:51.17:0,51,826	0/0:19,0:19:57.19:0,57,927	0/0:90,0:90:99:0,253,4097	0/0:22,0:22:63.20:0,63,998	0/0:21,0:21:63.20:0,63,1002	0/0:56,0:56:99:0,163,2638	0/0:20,0:20:57.17:0,57,904	0/0:24,0:24:72.25:0,72,1175	0/0:21,0:21:60.20:0,60,975	0/0:21,0:21:63.22:0,63,1024
chr10	16647363	.	G	GTTC	379.94	PASS	AB=0.709;AC=2;AF=0.036;AN=56;BaseQRankSum=7.782;DP=829;FS=11.151;HRun=0;HaplotypeScore=139.7668;InbreedingCoeff=-0.0370;MQ=77.91;MQ0=0;MQRankSum=-7.711;QD=7.75;ReadPosRankSum=2.986;VQSLOD=2.6827;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,111,2067	0/0:14,0:14:42.12:0,42,740	0/0:23,0:23:62.93:0,63,1017	0/0:18,0:18:41.47:0,41,716	0/0:24,0:24:66.23:0,66,1225	0/0:27,0:27:81.28:0,81,1510	0/0:27,0:27:78.23:0,78,1389	0/0:23,0:23:69.22:0,69,1216	0/0:41,0:41:99:0,123,2243	0/0:26,0:26:78.25:0,78,1357	0/0:19,0:19:54.19:0,54,1006	0/0:37,0:37:99:0,108,1968	0/0:25,0:25:75.21:0,75,1330	0/0:47,0:47:99:0,141,2591	0/0:29,0:29:87.30:0,87,1621	0/1:22,15:37:99:350,0,288	0/0:52,0:52:99:0,153,2785	0/1:7,5:12:99:119,0,146	0/0:18,0:18:51.17:0,51,950	0/0:19,0:19:57.20:0,57,1053	0/0:91,0:91:99:0,262,4707	0/0:21,0:21:63.20:0,63,1128	0/0:21,0:21:60.21:0,60,1101	0/0:56,0:56:99:0,163,2977	0/0:19,0:19:57.18:0,57,1031	0/0:24,0:24:72.25:0,72,1342	0/0:20,0:20:60.19:0,60,1087	0/0:21,0:21:63.22:0,63,1174
chr10	16647364	.	AGT	A	665.30	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.062;DP=825;FS=14.354;HRun=0;HaplotypeScore=119.7340;InbreedingCoeff=0.9753;MQ=77.54;MQ0=0;MQRankSum=-7.724;QD=13.58;ReadPosRankSum=1.624;VQSLOD=2.9575;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,108,1892	0/0:13,0:13:39.12:0,39,650	0/0:22,0:22:44.36:0,44,730	0/0:18,0:18:10.29:0,10,525	0/0:24,0:24:69.19:0,69,1136	0/0:27,0:27:75.26:0,75,1322	0/0:27,0:27:78.27:0,78,1366	0/0:24,0:24:54.16:0,54,876	0/0:41,0:41:99:0,111,1917	0/0:25,0:25:69.23:0,69,1178	0/0:19,0:19:54.17:0,54,918	0/0:37,0:37:99:0,108,1894	0/0:25,0:25:75.26:0,75,1320	0/0:47,0:47:99:0,135,2385	0/0:30,0:30:81.25:0,81,1379	1/1:22,15:37:59.83:558,60,0	0/0:51,0:51:99:0,148,2555	1/1:9,3:12:21.04:228,21,0	0/0:18,0:18:54.17:0,54,890	0/0:19,0:19:51.17:0,51,892	0/0:89,0:89:99:0,250,4302	0/0:21,0:21:60.21:0,60,1051	0/0:22,0:22:60.16:0,60,972	0/0:55,0:55:99:0,151,2646	0/0:19,0:19:54.18:0,54,937	0/0:24,0:24:72.23:0,72,1249	0/0:20,0:20:60.19:0,60,1022	0/0:21,0:21:51.17:0,51,880
chr10	16647366	.	T	TGTGA	1515.41	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.289;DP=827;FS=8.665;HRun=0;HaplotypeScore=154.8953;InbreedingCoeff=0.9983;MQ=76.27;MQ0=0;MQRankSum=-8.376;QD=30.93;ReadPosRankSum=1.248;VQSLOD=3.2725;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,108,2012	0/0:13,0:13:39.12:0,39,692	0/0:20,0:20:47.32:0,47,793	0/0:18,0:18:26.75:0,27,607	0/0:25,0:25:72.18:0,72,1221	0/0:27,0:27:75.26:0,75,1416	0/0:28,0:28:78.27:0,78,1446	0/0:24,0:24:60.17:0,60,968	0/0:41,0:41:99:0,114,2072	0/0:24,0:24:69.24:0,69,1282	0/0:20,0:20:54.17:0,54,984	0/0:36,0:36:99:0,108,2017	0/0:25,0:25:75.26:0,75,1387	0/0:47,0:47:99:0,135,2545	0/0:31,0:31:81.25:0,81,1467	1/1:22,15:37:63.37:1158,63,0	0/0:52,0:52:99:0,150,2747	1/1:7,5:12:24.06:478,24,0	0/0:19,0:19:54.17:0,54,942	0/0:18,0:18:51.17:0,51,966	0/0:92,0:92:99:0,253,4605	0/0:20,0:20:60.21:0,60,1122	0/0:20,0:20:60.16:0,60,1032	0/0:55,0:55:99:0,154,2839	0/0:19,0:19:54.18:0,54,1001	0/0:24,0:24:72.23:0,72,1329	0/0:20,0:20:60.19:0,60,1096	0/0:21,0:21:51.17:0,51,939
chr10	16647783	.	T	TG	2094.40	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-3.768;DP=744;FS=3.997;HRun=4;HaplotypeScore=75.9252;InbreedingCoeff=0.9989;MQ=85.46;MQ0=0;MQRankSum=-2.745;QD=33.78;ReadPosRankSum=1.932;VQSLOD=4.4032;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,117,1318	0/0:10,0:10:30.07:0,30,329	0/0:24,0:24:60.61:0,61,659	0/0:26,0:26:63.08:0,63,681	0/0:20,0:20:57.12:0,57,632	0/0:26,0:26:72.19:0,72,805	0/0:31,0:31:87.25:0,87,986	0/0:31,0:31:90.23:0,90,1003	0/0:24,1:25:25.12:0,25,663	0/0:34,0:34:90.25:0,90,1021	0/0:13,0:13:39.09:0,39,430	0/0:35,0:35:99:0,105,1190	0/0:25,0:25:66.15:0,66,728	0/0:30,0:30:84.21:0,84,941	0/0:25,0:25:72.19:0,72,807	1/1:0,25:25:72.24:985,72,0	0/0:36,0:36:99:0,105,1191	1/1:6,31:37:90.30:1231,90,0	0/0:25,0:25:66.19:0,66,749	0/0:17,0:17:51.13:0,51,569	0/0:56,0:56:99:0,150,1702	0/0:20,0:20:57.15:0,57,637	0/0:22,0:22:60.12:0,60,657	0/0:25,0:24:75.20:0,75,840	0/0:21,0:21:63.18:0,63,714	0/0:24,0:24:66.19:0,66,749	0/0:25,0:25:72.21:0,72,817	0/0:16,0:16:48.14:0,48,544
chr10	16650595	.	GT	G	228.76	PASS	AC=4;AF=0.083;AN=48;BaseQRankSum=2.073;DP=474;FS=0.000;HRun=7;HaplotypeScore=36.4468;InbreedingCoeff=0.5543;MQ=20.89;MQ0=274;MQRankSum=-2.553;QD=12.71;ReadPosRankSum=0.489;VQSLOD=1.4883;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:7:6.02:0,6,75	0/0:10,0:6:15.04:0,15,177	./.	./.	0/0:13,0:6:6.02:0,6,75	0/0:20,0:9:18.06:0,18,226	0/0:9,0:4:8.98:0,9,91	0/0:18,0:8:18.06:0,18,226	0/0:24,0:15:15.05:0,15,189	0/0:21,0:5:9.03:0,9,113	0/0:14,0:3:6.02:0,6,70	0/0:25,0:13:21.06:0,21,261	0/0:19,0:6:5.94:0,6,75	0/0:28,0:15:21.07:0,21,264	0/0:29,0:20:24.08:0,24,298	1/1:0,12:11:27.06:275,27,0	0/0:20,0:5:12.04:0,12,149	1/1:0,6:2:6.01:61,6,0	0/0:17,0:4:12.04:0,12,151	0/0:20,0:8:24.08:0,24,298	0/0:17,0:4:6.02:0,6,75	./.	0/0:11,0:3:3.01:0,3,32	0/0:22,0:8:6.02:0,6,75	0/0:20,0:15:26.94:0,27,335	0/0:23,0:13:36.09:0,36,437	0/0:16,0:5:9.03:0,9,113	./.
chr10	16651186	.	T	TA	526.19	PASS	AB=0.806;AC=9;AF=0.161;AN=56;BaseQRankSum=1.537;DP=491;FS=1.453;HRun=12;HaplotypeScore=56.1982;InbreedingCoeff=0.2224;MQ=45.56;MQ0=3;MQRankSum=-1.492;QD=5.11;ReadPosRankSum=-0.428;VQSLOD=1.2786;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:92.23:0,92,669	0/0:6,0:6:17.87:0,18,128	1/1:12,0:4:2.50:10,2,0	0/0:7,0:4:2.79:0,3,21	0/0:28,0:28:32.34:0,32,345	0/1:13,1:14:2.31:2,0,148	0/0:15,0:15:29.76:0,30,219	0/0:34,0:34:65.92:0,66,473	0/0:11,0:11:20.83:0,21,153	0/0:22,0:22:50.65:0,51,370	0/0:14,0:14:32.75:0,33,240	0/0:18,0:18:41.69:0,42,306	0/0:10,0:10:23.69:0,24,167	0/0:10,0:10:14.84:0,15,109	0/0:16,1:17:3.53:0,4,182	1/1:1,9:10:5.09:202,5,0	0/0:23,0:24:52.43:0,52,356	0/1:5,17:22:8.81:384,0,9	0/0:17,0:16:12.89:0,13,210	0/0:24,0:24:53.64:0,54,391	0/1:9,4:13:31.50:31,0,126	0/0:10,0:10:17.81:0,18,128	0/1:18,2:20:13.64:14,0,237	0/0:17,0:17:44.67:0,45,321	0/0:21,0:21:47.19:0,47,330	0/0:21,0:21:47.67:0,48,350	0/1:10,2:12:8.28:8,0,110	0/0:17,0:17:50.52:0,51,353
chr10	16658302	.	TGTCCTTCCA	T	16241.42	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=14.846;DP=538;FS=1.199;HRun=0;HaplotypeScore=149.0574;InbreedingCoeff=0.9558;MQ=57.31;MQ0=9;MQRankSum=-14.842;QD=53.78;ReadPosRankSum=0.716;VQSLOD=4.3465;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,111,5088	1/1:1,8:9:14.89:453,15,0	0/0:26,0:20:56.13:0,56,2333	0/0:33,0:22:52.44:0,52,2196	1/1:2,22:23:39.09:1066,39,0	0/0:30,0:30:78.27:0,78,3494	0/0:29,0:28:78.27:0,78,3473	1/1:6,6:4:8.97:136,9,0	1/1:0,18:17:45.15:1358,45,0	1/1:2,10:12:33.11:897,33,0	1/1:3,16:19:39.13:1047,39,0	0/0:29,0:29:84.29:0,84,3904	1/1:2,23:21:45.15:1347,45,0	1/1:1,12:11:27.09:817,27,0	1/1:2,12:12:33.11:989,33,0	0/0:24,0:23:45.15:0,45,2171	1/1:14,10:23:39.13:1126,39,0	0/0:23,0:23:60.21:0,60,2672	1/1:3,13:14:36.11:861,36,0	1/1:1,15:16:45.07:1271,45,0	1/1:3,14:16:8.71:273,9,0	1/1:1,11:12:24.08:726,24,0	1/1:2,10:11:21.07:611,21,0	1/1:7,6:12:14.87:261,15,0	1/1:4,10:13:27.09:765,27,0	1/1:2,18:18:48.16:1331,48,0	1/1:1,9:10:24.08:726,24,0	1/1:0,2:2:6.02:182,6,0
chr10	16658382	.	A	ATT	10712.73	PASS	AB=1.000;AC=45;AF=0.804;AN=56;BaseQRankSum=-2.579;DP=501;FS=1.507;HRun=10;HaplotypeScore=76.7955;InbreedingCoeff=0.8935;MQ=53.76;MQ0=4;MQRankSum=-4.693;QD=26.92;ReadPosRankSum=0.804;VQSLOD=5.0525;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:81.11:0,81,814	1/1:3,6:9:18.06:262,18,0	0/1:14,0:5:0.45:0,0,68	0/0:14,0:11:14.15:0,14,110	1/1:9,10:19:36.12:536,36,0	0/0:22,0:22:54.08:0,54,547	0/0:18,0:20:32.52:0,33,440	1/1:11,16:24:54.47:711,54,0	1/1:3,15:20:50.10:664,50,0	1/1:13,10:23:41.86:547,42,0	1/1:6,9:15:36.06:476,36,0	0/0:14,0:14:42.08:0,42,421	1/1:12,14:25:53.59:721,54,0	1/1:6,10:16:33.10:473,33,0	1/1:5,8:15:41.96:494,42,0	1/1:2,0:15:32.98:291,33,0	1/1:2,21:23:57.19:849,57,0	1/1:0,1:9:6.01:55,6,0	1/1:10,12:18:39.05:552,39,0	1/1:8,6:12:27.01:352,27,0	1/1:1,9:11:26.58:366,27,0	1/1:9,10:20:41.54:525,42,0	1/1:5,6:9:20.60:287,21,0	1/1:0,16:18:50.65:708,51,0	1/1:10,8:18:41.44:471,41,0	1/1:13,16:30:74.16:972,74,0	1/1:4,6:12:28.98:309,29,0	1/1:0,2:3:6.02:90,6,0
chr10	16658697	.	T	TA	8803.53	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-8.057;DP=492;FS=24.113;HRun=9;HaplotypeScore=54.7070;InbreedingCoeff=0.9676;MQ=66.06;MQ0=0;MQRankSum=0.744;QD=24.39;ReadPosRankSum=-0.595;VQSLOD=3.2101;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:92.98:0,93,806	1/1:1,12:13:30:315,30,0	0/0:18,0:13:10.43:0,10,161	0/0:10,0:6:11.21:0,11,85	1/1:2,21:23:31.06:558,31,0	0/0:21,0:21:56.99:0,57,495	0/0:12,0:12:32.98:0,33,286	1/1:9,21:29:40.08:656,40,0	1/1:2,9:11:21.04:232,21,0	1/1:2,24:26:69.16:743,69,0	1/1:2,15:17:45.05:480,45,0	0/0:15,0:15:38.99:0,39,338	1/1:6,12:19:19.02:423,19,0	1/1:2,12:14:27.07:299,27,0	1/1:2,20:22:10.05:339,10,0	0/0:10,0:10:23.98:0,24,204	1/1:1,24:25:69.19:763,69,0	0/0:13,0:13:32.98:0,33,286	1/1:6,25:32:78.02:825,78,0	1/1:5,13:18:36.10:395,36,0	1/1:3,9:12:27.07:296,27,0	1/1:0,4:4:12.03:127,12,0	1/1:2,11:13:22.41:235,22,0	1/1:2,7:9:15.04:166,15,0	1/1:0,12:12:30.08:332,30,0	1/1:4,20:24:50.24:624,50,0	1/1:4,17:21:48.13:531,48,0	1/1:1,15:16:42.11:465,42,0
chr10	16658819	.	AACACACACACACACACACACACACAC	A	5961.51	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=1.836;DP=600;FS=0.000;HRun=0;HaplotypeScore=361.3745;InbreedingCoeff=0.8691;MQ=58.02;MQ0=6;MQRankSum=1.693;QD=23.38;ReadPosRankSum=-1.572;VQSLOD=2.2849;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:32:2.64:0,3,19	0/0:1,0:6:18.06:0,18,1057	0/0:18,0:14:15.02:0,15,213	0/0:25,0:21:27.07:0,27,421	0/0:13,0:22:36.09:0,36,1755	0/0:20,0:20:20.42:0,20,1491	0/0:35,0:35:14.84:0,15,115	1/1:17,26:43:78.10:928,78,0	1/1:9,12:21:3.01:143,3,0	0/0:12,0:14:27.08:0,27,1272	0/0:6,0:15:28.79:0,29,1528	0/0:24,0:24:30.05:0,30,1806	1/1:7,21:28:15.05:845,15,0	1/1:2,19:21:12.04:768,12,0	0/0:11,0:20:45.14:0,45,2203	0/0:10,0:17:21.04:0,21,836	0/0:21,0:27:47.96:0,48,1186	0/0:17,0:20:29.93:0,30,732	1/1:10,14:23:41.99:796,42,0	1/1:3,13:16:11.99:573,12,0	1/1:33,0:33:14.99:145,15,0	1/1:1,8:8:12.04:762,12,0	1/1:4,15:19:6:325,6,0	1/1:5,14:19:3.01:203,3,0	1/1:4,18:22:9.03:472,9,0	0/0:16,0:23:54.17:0,54,2363	0/0:9,0:16:39.08:0,39,1557	0/0:4,0:7:12.04:0,12,742
chr10	16658848	.	A	ACGCACG	942.34	PASS	AB=0.556;AC=7;AF=0.125;AN=56;BaseQRankSum=-2.567;DP=564;FS=5.511;HRun=0;HaplotypeScore=205.4583;InbreedingCoeff=0.7127;MQ=42.71;MQ0=16;MQRankSum=-1.834;QD=7.54;ReadPosRankSum=3.162;VQSLOD=2.3546;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:7,19:32:0.02:0,0,0	0/0:10,0:10:26.25:0,26,361	0/0:7,0:1:3.01:0,3,39	0/0:26,0:13:30.56:0,31,494	0/0:26,0:26:29.98:0,30,354	1/1:4,17:26:15.04:419,15,0	1/1:8,26:37:4.42:76,4,0	0/0:30,0:28:50.90:0,51,514	0/0:13,0:13:3:0,3,28	0/0:14,0:13:24.49:0,24,277	0/0:24,0:24:25.56:0,26,297	1/1:3,21:26:11.78:572,12,0	0/0:26,0:25:24.03:0,24,272	0/0:19,0:19:12.04:0,12,164	0/0:23,0:22:50.38:0,50,624	0/0:14,0:14:33.09:0,33,501	0/0:20,0:19:37.95:0,38,403	0/0:15,0:15:41.41:0,41,565	0/0:18,0:15:35.75:0,36,321	0/0:14,0:14:15.04:0,15,183	0/0:29,0:28:23.70:0,24,214	0/0:10,0:9:14.96:0,15,180	0/0:18,0:17:9.42:0,9,86	0/0:17,0:17:6.02:0,6,81	0/0:19,0:19:9.03:0,9,116	0/0:25,0:25:61.22:0,61,770	0/0:17,0:17:43.81:0,44,539	0/0:5,0:5:14.94:0,15,212
chr10	16658865	.	TACAC	T	3794.08	PASS	AB=0.848;AC=19;AF=0.339;AN=56;BaseQRankSum=7.951;DP=621;FS=0.456;HRun=0;HaplotypeScore=211.9593;InbreedingCoeff=0.7122;MQ=48.03;MQ0=13;MQRankSum=-6.582;QD=18.24;ReadPosRankSum=6.219;VQSLOD=3.1819;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:23:9.50:0,10,143	1/1:5,5:10:27.09:403,27,0	0/0:19,0:8:23.30:0,23,409	0/0:30,0:15:41.13:0,41,627	0/1:4,21:25:8.92:170,0,9	0/0:30,0:30:38.49:0,38,687	0/0:28,0:28:6.02:0,6,117	0/0:43,0:41:72.24:0,72,1227	0/0:15,0:15:6.02:0,6,96	1/1:6,14:19:35.22:353,35,0	1/1:22,7:29:23.04:312,23,0	0/0:24,0:24:39.13:0,39,776	0/0:27,0:26:5.06:0,5,190	0/1:22,0:22:3.53:4,0,103	1/1:15,9:23:48.08:682,48,0	0/0:16,0:16:22.33:0,22,354	1/1:15,4:19:33.06:432,33,0	0/0:16,0:16:37.92:0,38,511	0/0:31,0:28:50.20:0,50,732	0/0:15,0:15:8.12:0,8,213	0/0:27,0:26:26.37:0,26,369	0/1:11,0:10:7.61:8,0,69	0/0:22,0:21:12.97:0,13,274	0/0:22,0:22:7.19:0,7,158	0/0:23,0:23:8.18:0,8,181	1/1:4,20:24:20.99:600,21,0	1/1:10,7:17:39.03:543,39,0	1/1:4,3:7:18.06:288,18,0
chr10	16658954	.	G	GC	1988.19	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-4.673;DP=615;FS=0.000;HRun=0;HaplotypeScore=99.1298;InbreedingCoeff=0.9968;MQ=90.11;MQ0=0;MQRankSum=-2.080;QD=42.30;ReadPosRankSum=3.121;VQSLOD=3.8567;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:69.21:0,69,943	0/0:7,0:7:21.07:0,21,294	0/0:24,0:24:69.23:0,69,944	0/0:27,0:27:78.19:0,78,1050	0/0:26,0:26:63.21:0,63,881	0/0:26,0:26:75.25:0,75,1047	0/0:22,0:22:63.21:0,63,879	0/0:44,0:44:99:0,120,1648	0/0:25,0:25:63.21:0,63,881	0/0:26,0:26:75.25:0,75,1046	0/0:16,0:16:45.14:0,45,611	0/0:22,0:22:63.21:0,63,880	0/0:23,0:23:66.20:0,66,905	0/0:26,0:26:63.21:0,63,881	0/0:29,0:29:84.28:0,84,1175	1/1:0,28:28:81.28:1295,81,0	0/0:27,0:27:78.26:0,78,1091	1/1:2,17:19:51.17:815,51,0	0/0:18,0:18:48.16:0,48,671	0/0:11,0:11:33.11:0,33,461	0/0:24,0:24:66.22:0,66,922	0/0:9,0:9:27.09:0,27,377	0/0:12,0:12:33.11:0,33,461	0/0:23,0:23:63.18:0,63,859	0/0:11,0:11:30.10:0,30,419	0/0:21,0:21:57.18:0,57,782	0/0:26,0:26:72.24:0,72,1006	0/0:18,0:18:48.16:0,48,668
chr10	16659007	.	TA	T	10255.61	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=4.667;DP=580;FS=3.648;HRun=8;HaplotypeScore=64.6339;InbreedingCoeff=0.9923;MQ=82.11;MQ0=0;MQRankSum=-1.223;QD=24.71;ReadPosRankSum=5.908;VQSLOD=5.2434;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:60.17:0,60,712	1/1:1,14:15:39.06:377,39,0	0/0:18,0:19:36.03:0,36,412	0/0:17,0:18:34.22:0,34,314	1/1:2,29:31:84.13:811,84,0	0/0:32,0:32:93.25:0,93,1107	0/0:23,0:23:57.16:0,57,677	1/1:1,16:17:44.73:411,45,0	1/1:2,18:20:42.07:406,42,0	1/1:5,34:39:99:953,99,0	1/1:2,14:16:19.44:370,19,0	0/0:19,0:19:57.06:0,57,642	1/1:4,21:25:34.01:513,34,0	1/1:0,21:21:54.08:521,54,0	1/1:2,19:21:57.09:550,57,0	0/0:20,0:20:54.16:0,54,642	1/1:1,26:27:78.13:753,78,0	0/0:14,0:14:42.11:0,42,494	1/1:2,13:15:35.99:333,36,0	1/1:3,12:15:33.05:319,33,0	1/1:2,25:27:72.11:695,72,0	1/1:0,4:4:12.02:116,12,0	1/1:0,14:14:39.06:377,39,0	1/1:1,15:16:45.07:435,45,0	1/1:1,8:9:18.03:174,18,0	1/1:1,33:34:99:956,99,0	1/1:5,18:23:51.07:492,51,0	1/1:0,26:26:72.12:695,72,0
chr10	16659518	.	G	GT	4773.51	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-8.968;DP=475;FS=2.286;HRun=10;HaplotypeScore=51.1127;InbreedingCoeff=0.9761;MQ=73.83;MQ0=0;MQRankSum=0.301;QD=21.80;ReadPosRankSum=-0.914;VQSLOD=5.4051;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,1:25:33.93:0,34,485	0/0:9,0:9:26.97:0,27,222	0/0:16,0:14:28.89:0,29,209	0/0:10,0:8:10.49:0,10,75	0/0:21,1:22:15.90:0,16,335	0/0:14,0:14:41.95:0,42,345	0/0:17,0:17:7.21:0,7,257	1/1:9,22:32:72.72:693,73,0	1/1:3,14:18:44.98:462,45,0	0/0:25,0:25:56.89:0,57,463	0/0:20,0:21:41.92:0,42,345	0/0:13,0:14:37.99:0,38,300	1/1:1,16:18:38.93:398,39,0	1/1:1,9:10:18.05:192,18,0	0/0:19,0:19:50.93:0,51,416	1/1:2,17:19:48.12:512,48,0	0/0:12,0:12:32.96:0,33,271	1/1:7,10:17:18.04:189,18,0	1/1:3,10:14:29.93:296,30,0	1/1:5,18:23:51.09:530,51,0	1/1:0,8:10:26.72:245,27,0	1/1:1,9:11:24.62:292,25,0	1/1:2,12:14:33.08:352,33,0	1/1:1,7:8:18.05:192,18,0	1/1:8,17:25:20.77:420,21,0	0/0:21,0:21:44.91:0,45,368	0/0:19,0:19:47.92:0,48,391	0/0:11,0:11:32.96:0,33,271
chr10	16660456	.	G	GA	1861.22	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=-6.033;DP=173;FS=0.000;HRun=2;HaplotypeScore=16.9052;InbreedingCoeff=0.7347;MQ=71.87;MQ0=0;MQRankSum=0.148;QD=31.55;ReadPosRankSum=1.693;VQSLOD=2.8170;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:44.84:0,45,495	1/1:0,1:1:3.01:43,3,0	0/0:2,0:2:6.02:0,6,74	0/1:7,0:6:33.57:34,0,97	1/1:0,2:2:5.98:63,6,0	0/0:3,0:3:9.03:0,9,111	0/0:13,0:13:36.01:0,36,400	0/0:8,0:8:24.08:0,24,297	0/0:2,0:2:6.02:0,6,74	1/1:1,10:11:30.10:426,30,0	1/1:0,3:3:5.98:63,6,0	0/0:4,0:4:12.04:0,12,149	0/0:6,0:6:15.05:0,15,186	0/0:3,0:3:9.03:0,9,112	1/1:1,8:9:21.07:302,21,0	0/0:5,0:5:15.05:0,15,186	1/1:0,13:13:39.13:561,39,0	0/0:8,0:8:21.07:0,21,260	0/0:7,0:7:21.07:0,21,260	0/0:5,0:5:15.05:0,15,186	0/0:7,0:7:21.05:0,21,248	0/0:5,0:5:12.04:0,12,149	0/0:1,0:1:3.01:0,3,37	0/0:13,0:13:39.01:0,39,423	0/0:5,0:5:15.05:0,15,186	1/1:0,7:7:21.07:302,21,0	1/1:0,5:5:15.05:216,15,0	1/1:0,1:1:3.01:43,3,0
chr10	16665951	.	A	AAAAC	10214.71	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-13.342;DP=784;FS=0.722;HRun=0;HaplotypeScore=118.4023;InbreedingCoeff=0.9978;MQ=66.40;MQ0=5;MQRankSum=0.935;QD=47.29;ReadPosRankSum=0.688;VQSLOD=5.6370;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:14,32:45:87.30:2071,87,0	0/0:15,0:15:39.13:0,39,612	0/0:24,0:16:18.05:0,18,256	0/0:22,0:19:22.86:0,23,328	0/0:28,0:28:72.22:0,72,1112	1/1:5,19:24:48.16:1180,48,0	1/1:12,26:38:63.22:1514,63,0	0/0:22,0:22:45.14:0,45,661	0/0:37,0:37:93.30:0,93,1476	0/0:29,0:29:78.26:0,78,1216	0/0:17,0:17:45.15:0,45,713	1/1:9,23:30:57.20:1387,57,0	0/0:26,0:26:60.18:0,60,928	0/0:25,0:25:48.16:0,48,786	0/0:46,0:45:99:0,108,1692	1/1:4,35:39:90.31:2224,90,0	0/0:28,0:28:66.22:0,66,1055	1/1:10,26:36:79.81:1839,80,0	0/0:18,0:18:36.12:0,36,522	0/0:29,0:29:72.23:0,72,1139	0/0:27,0:27:63.20:0,63,1007	0/0:29,0:29:69.23:0,69,1125	0/0:24,0:24:63.21:0,63,1013	0/0:24,0:24:56:0,56,881	0/0:21,0:21:60.20:0,60,986	0/0:30,0:30:72.24:0,72,1163	0/0:25,0:24:48.16:0,48,763	0/0:22,0:22:57.12:0,57,894
chr10	16670114	.	TTATATATA	T	5231.75	PASS	AB=0.600;AC=45;AF=0.900;AN=50;BaseQRankSum=-0.909;DP=176;FS=2.306;HRun=0;HaplotypeScore=48.4318;InbreedingCoeff=0.1623;MQ=80.31;MQ0=4;MQRankSum=-1.819;QD=36.33;ReadPosRankSum=2.027;VQSLOD=4.4235;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	1/1:1,2:3:6.02:156,6,0	0/0:10,0:8:2.97:0,3,21	0/0:19,0:8:1.11:0,1,6	1/1:6,0:6:8.99:149,9,0	1/1:5,4:9:12.04:312,12,0	./.	1/1:14,10:24:30.09:667,30,0	1/1:2,6:8:15.05:349,15,0	1/1:2,4:6:12.04:261,12,0	1/1:2,2:4:6.02:156,6,0	1/1:0,1:2:6.02:134,6,0	1/1:2,1:3:3.01:78,3,0	1/1:2,1:3:3.01:78,3,0	1/1:2,1:3:3.01:78,3,0	1/1:0,2:2:6.02:156,6,0	1/1:7,5:12:12.04:228,12,0	1/1:2,2:5:9.03:212,9,0	1/1:4,9:13:30.10:749,30,0	1/1:5,1:6:3.01:78,3,0	1/1:3,0:3:3.01:78,3,0	1/1:2,1:3:3.01:78,3,0	1/1:2,3:5:6.02:156,6,0	./.	1/1:3,2:7:12.04:250,12,0	0/1:1,2:3:28.80:147,0,29	1/1:2,1:3:3.01:78,3,0	1/1:3,7:9:24.08:602,24,0
chr10	16670132	.	AT	A	293.73	PASS	AB=0.951;AC=27;AF=0.519;AN=52;BaseQRankSum=5.143;DP=177;FS=2.547;HRun=1;HaplotypeScore=48.6260;InbreedingCoeff=-0.0267;MQ=84.56;MQ0=8;MQRankSum=-4.513;QD=2.72;ReadPosRankSum=6.875;VQSLOD=-0.6254;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/0:4,0:4:0.65:0,1,53	0/1:21,0:10:3.72:4,0,55	0/0:37,0:14:5.02:0,5,109	0/1:1,4:5:25.14:87,0,25	0/0:9,0:9:4.35:0,4,171	0/0:1,0:1:3.01:0,3,38	0/1:14,0:14:68.30:68,0,168	0/1:7,0:7:4.69:5,0,59	0/1:5,0:5:25.58:75,0,26	1/1:2,0:2:3.37:9,3,0	0/0:4,0:4:1.14:0,1,67	0/0:2,0:2:0.18:0,0,33	1/1:1,0:1:1.55:4,2,0	1/1:1,0:1:1.55:4,2,0	1/1:3,0:3:3.11:8,3,0	0/0:9,0:9:6.72:0,7,124	0/1:8,0:8:4.54:5,0,14	0/1:13,0:13:41.83:42,0,97	1/1:1,0:1:1.55:4,2,0	1/1:2,0:2:2.60:10,3,0	1/1:1,0:1:2.04:6,2,0	1/1:3,0:3:3.11:8,3,0	./.	0/1:7,0:7:37.72:38,0,60	0/1:3,0:3:2.31:2,0,29	0/0:2,0:2:0.36:0,0,34	1/1:9,2:9:14.16:44,14,0
chr10	16671039	.	CT	C	9343.84	PASS	AB=0.784;AC=50;AF=0.893;AN=56;BaseQRankSum=-2.008;DP=607;FS=1.935;HRun=11;HaplotypeScore=87.1263;InbreedingCoeff=0.2837;MQ=64.01;MQ0=7;MQRankSum=1.430;QD=16.22;ReadPosRankSum=2.513;VQSLOD=5.7136;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,23:25:52.98:425,53,0	1/1:8,6:14:33.98:257,34,0	0/1:29,1:12:15.56:16,0,60	0/0:30,0:12:11.71:0,12,86	1/1:11,12:23:51.64:417,52,0	0/1:6,11:16:2.03:192,0,2	1/1:2,14:16:35.96:296,36,0	1/1:21,18:38:57.88:488,58,0	1/1:12,10:22:56.90:463,57,0	1/1:16,8:24:53.91:443,54,0	1/1:12,5:17:23.11:345,23,0	1/1:2,15:17:3.20:217,3,0	1/1:12,4:16:38.94:320,39,0	1/1:10,9:19:50.87:406,51,0	1/1:19,10:29:73.70:595,74,0	1/1:2,16:18:32.95:271,33,0	1/1:22,5:27:71.90:591,72,0	0/1:6,21:28:2.01:387,0,2	1/1:19,4:24:26.78:416,27,0	1/1:18,9:27:59.87:486,60,0	1/1:12,6:18:29.93:246,30,0	0/1:16,0:16:4.98:170,0,5	1/1:13,4:17:44.93:368,45,0	1/1:22,1:23:10.77:389,11,0	1/1:5,6:11:26.97:222,27,0	1/1:19,11:30:59.84:486,60,0	1/1:15,4:19:10.89:286,11,0	1/1:9,1:10:17.96:148,18,0
chr10	16671059	.	C	CT	9171.30	PASS	AC=40;AF=0.741;AN=54;BaseQRankSum=-4.191;DP=547;FS=0.460;HRun=7;HaplotypeScore=83.4825;InbreedingCoeff=0.9286;MQ=52.94;MQ0=8;MQRankSum=-2.688;QD=22.99;ReadPosRankSum=-0.708;VQSLOD=4.4709;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:60.09:0,60,578	1/1:10,5:15:30.04:335,30,0	./.	0/0:15,0:3:3:0,3,29	1/1:17,9:26:48.12:546,48,0	0/0:12,0:11:18.03:0,18,174	0/0:20,0:20:45.02:0,45,416	1/1:19,16:34:44.91:497,45,0	1/1:14,6:20:42.12:489,42,0	1/1:17,2:19:28.63:321,29,0	1/1:13,4:17:39.11:457,39,0	0/0:16,0:16:39.05:0,39,372	1/1:12,3:15:2.92:292,3,0	1/1:17,4:21:42.12:489,42,0	1/1:12,9:21:54.16:631,54,0	0/0:13,0:13:27.04:0,27,261	1/1:25,4:29:78.22:920,78,0	0/0:33,0:33:66.03:0,66,616	1/1:14,7:20:42.13:507,42,0	1/1:20,7:27:57.12:658,57,0	1/1:14,4:18:21.06:254,21,0	1/1:6,1:7:21.06:244,21,0	1/1:9,8:17:33.08:377,33,0	1/1:15,8:23:54.30:652,54,0	1/1:11,5:15:24.06:271,24,0	1/1:17,8:25:48.12:544,48,0	1/1:19,1:19:42.13:507,42,0	1/1:7,0:7:15.05:180,15,0
chr10	16671471	.	A	AT	13502.52	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-6.009;DP=482;FS=10.250;HRun=8;HaplotypeScore=41.3198;InbreedingCoeff=0.9785;MQ=75.41;MQ0=0;MQRankSum=-6.073;QD=29.16;ReadPosRankSum=3.588;VQSLOD=4.4996;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,20:22:57.17:658,57,0	1/1:1,9:10:27.08:312,27,0	0/0:10,0:10:14.33:0,14,107	0/0:9,0:8:19.01:0,19,139	1/1:4,21:25:35.72:665,36,0	1/1:5,12:17:39.12:450,39,0	1/1:3,15:18:39.12:450,39,0	1/1:3,37:40:99:1223,111,0	1/1:5,15:20:42.12:485,42,0	1/1:2,17:19:51.15:589,51,0	1/1:0,12:12:36.11:415,36,0	1/1:0,15:15:42.12:485,42,0	1/1:4,21:25:60.17:685,60,0	1/1:1,12:13:36.11:415,36,0	1/1:1,13:14:39.12:450,39,0	1/1:2,17:19:48.14:554,48,0	1/1:1,18:19:48.14:554,48,0	1/1:1,14:15:42.12:483,42,0	1/1:3,12:15:36.07:402,36,0	1/1:3,18:21:54.16:623,54,0	1/1:3,5:8:17.95:176,18,0	1/1:0,7:7:21.06:242,21,0	1/1:0,13:13:33.10:381,33,0	1/1:1,11:12:27.08:312,27,0	1/1:2,20:22:57.17:658,57,0	1/1:1,25:26:75.22:866,75,0	1/1:4,20:24:57.17:658,57,0	1/1:2,10:12:27.08:312,27,0
chr10	16673105	.	GA	G	4055.93	PASS	AB=0.591;AC=21;AF=0.375;AN=56;BaseQRankSum=-3.448;DP=580;FS=2.081;HRun=12;HaplotypeScore=100.1165;InbreedingCoeff=0.9143;MQ=56.76;MQ0=7;MQRankSum=3.695;QD=17.04;ReadPosRankSum=1.043;VQSLOD=4.1505;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:39:84.02:0,84,556	0/0:1,0:5:14.20:0,14,71	0/0:6,0:3:5.98:0,6,49	0/0:11,0:7:8.38:0,8,105	0/0:13,0:34:60.93:0,61,328	0/0:1,0:18:31.42:0,31,165	0/0:4,0:12:22.85:0,23,119	1/1:13,30:42:86.40:672,86,0	1/1:1,12:13:13.29:213,13,0	0/0:10,0:15:27.60:0,28,144	0/0:7,0:24:33.59:0,34,170	0/0:5,0:10:17.04:0,17,86	0/1:4,9:13:3.55:159,0,4	1/1:3,20:23:59.76:464,60,0	0/0:6,0:20:34.50:0,34,193	0/0:12,0:12:27.05:0,27,273	0/0:16,0:33:76.51:0,77,416	0/0:24,0:23:54.11:0,54,548	1/1:4,22:26:65.69:508,66,0	1/1:7,18:25:53.68:411,54,0	1/1:2,17:19:47.81:372,48,0	1/1:3,9:12:23.90:186,24,0	1/1:6,16:23:43.82:331,44,0	1/1:3,19:22:50.80:395,51,0	1/1:4,14:19:46.77:347,47,0	0/0:11,0:36:69.99:0,70,359	0/0:6,0:20:43.17:0,43,219	0/0:4,0:17:34.72:0,35,222
chr10	16673270	.	TA	T	4419.37	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=11.159;DP=549;FS=4.684;HRun=10;HaplotypeScore=62.5310;InbreedingCoeff=0.9098;MQ=69.89;MQ0=0;MQRankSum=-0.493;QD=22.32;ReadPosRankSum=2.958;VQSLOD=5.8899;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:32:84.69:0,85,922	1/1:0,8:8:23.95:201,24,0	0/0:11,0:10:26.53:0,27,239	0/1:11,0:11:38.56:39,0,53	1/1:2,30:32:89.78:762,90,0	0/0:11,0:11:33.08:0,33,357	0/0:9,0:9:20.65:0,21,209	0/0:39,0:41:92.86:0,93,961	0/0:16,0:17:44.95:0,45,478	1/1:4,22:26:71.89:612,72,0	1/1:4,10:14:29.94:253,30,0	0/0:19,0:19:57.14:0,57,618	0/0:17,0:17:48.12:0,48,523	0/0:19,0:19:42.09:0,42,450	1/1:4,15:19:47.97:413,48,0	0/0:19,1:20:28.10:0,28,525	1/1:0,25:25:71.99:625,72,0	0/0:6,0:6:9.02:0,9,99	0/0:32,0:32:90.22:0,90,976	0/0:30,1:31:52.16:0,52,804	0/0:12,0:13:29.87:0,30,299	0/0:15,0:15:33.09:0,33,365	0/0:25,0:25:48.12:0,48,524	0/0:10,0:10:24.06:0,24,266	0/0:23,0:23:63.16:0,63,688	1/1:3,28:31:86.95:749,87,0	1/1:3,19:22:59.87:505,60,0	1/1:0,10:10:29.99:260,30,0
chr10	16673347	.	CT	C	4234.18	PASS	AB=0.847;AC=47;AF=0.839;AN=56;BaseQRankSum=4.867;DP=600;FS=8.933;HRun=12;HaplotypeScore=97.7989;InbreedingCoeff=0.4054;MQ=85.73;MQ0=4;MQRankSum=-0.901;QD=7.62;ReadPosRankSum=4.237;VQSLOD=3.2981;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,2:29:18.70:0,19,565	1/1:3,0:9:12.21:35,12,0	0/1:47,0:27:32.63:33,0,134	0/1:47,1:39:45.18:45,0,231	1/1:6,0:29:48.17:140,48,0	0/1:14,3:17:8.53:9,0,256	0/0:12,0:15:28.07:0,28,315	1/1:15,16:33:1.97:326,2,0	1/1:2,20:22:47.73:364,48,0	1/1:3,1:24:42.16:137,42,0	1/1:2,1:25:41.61:120,42,0	0/1:17,3:20:1.41:1,0,334	1/1:3,13:17:13.45:277,13,0	1/1:3,11:14:14.94:116,15,0	1/1:2,0:19:33.05:97,33,0	1/1:6,12:19:34.89:261,35,0	1/1:2,0:19:34.62:100,35,0	1/1:1,5:6:14.94:116,15,0	1/1:8,12:20:35.82:277,36,0	0/1:3,18:23:3.03:325,0,3	1/1:1,5:7:16.98:122,17,0	1/1:5,18:23:47.79:371,48,0	1/1:3,17:20:35.85:279,36,0	1/1:1,12:13:20.65:162,21,0	1/1:5,12:18:34.89:261,35,0	1/1:13,0:32:40.69:117,41,0	1/1:3,0:24:40.72:118,41,0	1/1:1,0:6:8.15:24,8,0
chr10	16676648	.	A	AAAC	18483.73	PASS	AC=50;AF=0.926;AN=54;BaseQRankSum=-4.882;DP=421;FS=21.819;HRun=0;HaplotypeScore=69.6971;InbreedingCoeff=0.9341;MQ=72.63;MQ0=0;MQRankSum=-6.929;QD=46.79;ReadPosRankSum=4.505;VQSLOD=4.1318;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,17:21:42.14:910,42,0	1/1:3,3:6:12.04:253,12,0	0/0:12,0:10:24.08:0,24,384	0/0:13,0:13:32.60:0,33,430	1/1:5,24:30:59.87:1073,60,0	1/1:3,12:15:30.03:614,30,0	1/1:2,9:11:27.09:595,27,0	1/1:1,18:20:51.16:973,51,0	1/1:1,13:15:36.12:793,36,0	1/1:5,13:19:48.13:967,48,0	1/1:3,20:23:56.94:1079,57,0	1/1:0,6:6:18.06:396,18,0	1/1:1,16:17:33.58:726,34,0	1/1:0,13:13:33.11:727,33,0	1/1:1,6:7:17.93:300,18,0	1/1:2,8:10:21.07:431,21,0	1/1:2,21:23:48.16:1059,48,0	1/1:0,7:7:21.07:463,21,0	1/1:4,5:9:15.05:285,15,0	1/1:6,23:29:66.10:1318,66,0	./.	1/1:1,12:13:36.12:781,36,0	1/1:1,19:20:45.07:913,45,0	1/1:2,8:10:9.03:186,9,0	1/1:5,23:28:63.08:1281,63,0	1/1:1,12:13:36.12:779,36,0	1/1:3,17:20:48.10:997,48,0	1/1:0,9:9:27.09:586,27,0
chr10	16678298	.	GAA	G	2722.55	PASS	AB=0.693;AC=30;AF=0.536;AN=56;BaseQRankSum=1.634;DP=652;FS=3.184;HRun=17;HaplotypeScore=115.8466;InbreedingCoeff=0.5480;MQ=62.53;MQ0=7;MQRankSum=0.565;QD=6.79;ReadPosRankSum=3.180;VQSLOD=0.5229;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:9,0:23:43.36:72,0,43	0/0:7,0:7:17.25:0,17,112	0/1:32,0:8:11.80:14,0,12	0/0:30,0:11:9.33:0,9,59	0/0:30,0:31:69.51:0,70,546	0/1:6,0:17:3.64:65,0,4	1/1:3,0:15:8.37:94,8,0	0/1:23,10:35:52.45:189,0,52	0/1:4,8:13:5.57:68,0,6	0/0:19,0:19:43.69:0,44,300	0/0:32,0:33:71.75:0,72,566	1/1:10,0:23:7.87:133,8,0	1/1:29,6:35:52.93:456,53,0	1/1:12,13:25:13.50:214,14,0	0/0:26,0:29:53.03:0,53,429	1/1:2,0:23:38.21:161,38,0	0/0:32,0:34:86.09:0,86,632	0/1:5,0:16:5.10:68,0,5	1/1:15,4:23:2.80:122,3,0	1/1:23,7:33:49.58:351,50,0	1/1:5,3:8:17.88:136,18,0	1/1:12,9:23:34.45:239,34,0	1/1:8,10:20:29.21:213,29,0	1/1:12,2:14:8.57:167,9,0	1/1:11,8:21:5.34:163,5,0	0/0:25,0:25:55.13:0,55,391	0/0:33,0:34:82.80:0,83,656	0/0:9,0:8:20.91:0,21,158
chr10	16678311	.	A	AG	1275.63	PASS	AB=0.963;AC=16;AF=0.286;AN=56;BaseQRankSum=-6.492;DP=636;FS=28.343;HRun=0;HaplotypeScore=115.1263;InbreedingCoeff=0.5398;MQ=63.04;MQ0=8;MQRankSum=2.782;QD=4.76;ReadPosRankSum=-0.174;VQSLOD=1.4003;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:20,2:22:46.09:46,0,121	1/1:7,0:7:7.41:37,7,0	0/0:34,0:9:2.86:0,3,102	0/1:34,0:12:3.39:3,0,99	0/1:26,2:28:1.23:156,0,1	0/0:12,0:12:16.88:0,17,81	0/0:17,0:17:36.07:0,36,190	0/0:39,0:39:93.57:0,94,702	0/0:14,0:14:23.85:0,24,184	1/1:19,0:19:30.47:195,30,0	0/1:28,0:29:23.61:84,0,24	0/0:19,0:19:20.90:0,21,168	0/0:33,0:32:90.13:0,90,607	0/0:23,0:23:47.65:0,48,349	0/1:26,1:27:0.58:149,0,1	0/0:25,0:25:52.29:0,52,323	1/1:30,5:35:18.12:294,18,0	0/0:18,0:18:12.66:0,13,203	0/0:22,0:21:51.36:0,51,384	0/0:25,0:25:70.83:0,71,454	0/0:10,0:10:28.78:0,29,203	0/0:21,0:21:55.61:0,56,379	0/0:20,0:20:44.57:0,45,317	0/0:15,0:14:38.63:0,39,277	0/0:21,0:21:53.65:0,54,408	1/1:19,3:22:31.97:276,32,0	0/1:35,0:35:29.48:146,0,29	1/1:10,0:9:14.65:71,15,0
chr10	16679031	.	GAACAAC	G	2832.58	PASS	AB=0.703;AC=29;AF=0.580;AN=50;BaseQRankSum=3.616;DP=642;FS=7.206;HRun=0;HaplotypeScore=155.7367;InbreedingCoeff=0.7622;MQ=68.77;MQ0=7;MQRankSum=-5.431;QD=8.80;ReadPosRankSum=2.495;VQSLOD=1.8999;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:32:6.02:82,6,0	0/0:5,0:5:12.04:0,12,242	./.	./.	0/0:18,0:18:15.05:0,15,408	1/1:10,0:25:18.05:232,18,0	./.	0/0:25,0:24:1.82:0,2,5	0/1:15,11:26:70.22:397,0,70	0/0:12,0:18:24.08:0,24,694	0/0:13,0:20:28.28:0,28,501	1/1:7,0:22:21.07:292,21,0	1/1:12,8:20:15.05:301,15,0	1/1:12,16:27:30.03:540,30,0	0/0:32,0:40:39.11:0,39,969	1/1:17,0:25:12.04:167,12,0	0/0:16,0:28:16.29:0,16,274	1/1:8,0:15:9.03:126,9,0	1/1:14,4:19:12.03:185,12,0	1/1:10,6:16:17.40:139,17,0	1/1:25,0:25:4.79:67,5,0	1/1:10,0:10:3.01:46,3,0	1/1:11,3:14:8.77:91,9,0	1/1:17,14:31:11.87:240,12,0	1/1:8,6:14:5.85:120,6,0	0/0:14,0:26:50.88:0,51,1159	0/0:16,0:32:38.02:0,38,860	0/0:15,0:16:24.08:0,24,590
chr10	16680438	.	G	GA	5470.24	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-11.282;DP=544;FS=0.748;HRun=8;HaplotypeScore=49.5412;InbreedingCoeff=0.9378;MQ=58.36;MQ0=12;MQRankSum=-0.216;QD=25.33;ReadPosRankSum=-0.141;VQSLOD=5.2751;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:31:77.04:0,77,759	0/0:5,0:5:12.01:0,12,110	0/0:16,0:7:2.14:0,2,60	0/0:10,0:6:2.25:0,2,73	0/0:22,0:22:60.03:0,60,549	0/0:18,0:17:54.03:0,54,494	0/0:19,0:19:48.03:0,48,439	1/1:8,24:26:69.13:758,69,0	1/1:2,18:20:54.16:623,54,0	0/0:22,0:22:56.06:0,56,498	0/0:21,0:21:59.81:0,60,544	0/0:12,0:12:33.02:0,33,302	1/1:2,11:12:30.09:346,30,0	1/1:1,16:16:45.13:519,45,0	0/0:11,0:11:26.81:0,27,239	0/0:18,0:18:45.02:0,45,412	0/0:31,0:30:77.98:0,78,701	0/0:23,0:21:50.99:0,51,461	1/1:6,22:23:63.18:721,63,0	1/1:2,12:14:29.95:324,30,0	1/1:0,9:9:18.05:208,18,0	1/1:4,8:12:21.06:239,21,0	1/1:3,20:23:39.35:450,39,0	1/1:3,21:23:48.14:554,48,0	1/1:1,23:23:63.19:727,63,0	0/0:26,0:26:72.04:0,72,659	0/0:26,0:25:72.04:0,72,659	0/0:15,0:12:36.02:0,36,329
chr10	16681895	.	C	CG	489.47	PASS	AB=0.988;AC=14;AF=0.259;AN=54;BaseQRankSum=3.025;DP=265;FS=8.614;HRun=7;HaplotypeScore=50.3468;InbreedingCoeff=0.4192;MQ=76.00;MQ0=12;MQRankSum=-1.517;QD=4.89;ReadPosRankSum=-2.121;VQSLOD=-0.6049;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:14:18.45:99,18,0	0/1:5,0:5:14.43:14,0,41	0/0:22,0:8:5.75:0,6,52	0/1:19,0:12:12.09:12,0,66	0/1:2,0:2:9.72:13,0,10	./.	1/1:10,0:11:13.13:57,13,0	0/0:14,0:14:27.03:0,27,253	0/0:3,0:3:9.01:0,9,87	0/0:7,0:7:8.92:0,9,86	0/0:7,0:7:2.45:0,2,70	1/1:8,0:11:14.31:72,14,0	0/0:19,0:19:38.77:0,39,367	0/1:15,0:15:4.51:5,0,140	0/0:13,0:13:11.18:0,11,77	1/1:2,3:5:9.03:109,9,0	0/0:21,0:21:4.23:0,4,36	1/1:3,13:16:24.03:274,24,0	0/0:3,0:3:2.97:0,3,20	0/0:1,0:1:3:0,3,29	0/0:8,0:8:12.02:0,12,116	0/0:4,0:4:9:0,9,82	0/0:7,0:7:9.01:0,9,86	0/0:5,0:5:8.98:0,9,81	0/0:4,0:4:5.96:0,6,58	0/0:7,1:8:5.85:0,6,69	0/0:11,0:11:6.74:0,7,40	0/0:5,0:5:8.62:0,9,44
chr10	16681903	.	T	TG	1043.59	PASS	AB=0.778;AC=24;AF=0.429;AN=56;BaseQRankSum=0.852;DP=260;FS=3.472;HRun=9;HaplotypeScore=39.1373;InbreedingCoeff=0.4240;MQ=83.78;MQ0=2;MQRankSum=-1.312;QD=8.35;ReadPosRankSum=1.332;VQSLOD=0.7367;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,6:13:7.02:63,7,0	1/1:5,0:5:8.84:68,9,0	0/0:15,0:10:12.74:0,13,139	0/0:18,0:13:3.76:0,4,107	1/1:0,2:2:6.02:66,6,0	1/1:1,3:4:3.01:32,3,0	0/1:8,2:10:11.76:84,0,12	0/0:12,0:12:20.98:0,21,178	0/1:6,0:6:15.19:15,0,112	0/1:5,4:9:17.07:37,0,17	1/1:1,5:7:17.67:160,18,0	1/1:5,3:8:13.39:130,13,0	0/0:20,0:20:48.46:0,48,400	0/0:17,0:17:17.69:0,18,273	1/1:2,11:13:15.04:166,15,0	0/0:4,0:4:7.67:0,8,28	0/1:3,17:20:29.64:142,0,30	0/0:15,0:15:4.74:0,5,76	0/0:3,0:3:5.97:0,6,46	0/1:4,0:4:0.27:0,0,21	0/0:5,0:5:12:0,12,104	0/0:4,0:4:8.68:0,9,63	0/0:6,0:6:5.96:0,6,47	0/0:10,0:10:20.81:0,21,184	0/0:5,0:5:11.93:0,12,99	1/1:5,4:9:9.02:100,9,0	1/1:3,6:9:8.86:80,9,0	0/1:2,4:6:11.91:88,0,12
chr10	16682892	.	C	CT	8440.06	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-15.925;DP=667;FS=1.354;HRun=5;HaplotypeScore=60.2868;InbreedingCoeff=0.9999;MQ=85.27;MQ0=0;MQRankSum=-1.512;QD=32.84;ReadPosRankSum=0.540;VQSLOD=5.3684;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:66.14:0,66,699	0/0:10,0:10:30.06:0,30,314	0/0:29,0:29:44.98:0,45,682	0/0:17,0:17:38.54:0,39,395	0/0:27,0:26:72.17:0,72,767	0/0:26,0:26:75.19:0,75,806	0/0:25,0:25:72.18:0,72,773	1/1:10,27:37:81.26:1066,81,0	1/1:1,12:13:39.13:510,39,0	0/0:40,0:40:99:0,117,1214	0/0:37,0:37:99:0,99,1056	0/0:16,0:16:48.11:0,48,508	1/1:3,19:22:48.16:632,48,0	1/1:0,13:13:36.12:474,36,0	0/0:27,0:27:78.14:0,78,811	0/0:27,0:27:81.16:0,81,847	0/0:20,0:20:48.12:0,48,516	0/0:13,0:13:39.08:0,39,410	1/1:3,28:31:81.26:1064,81,0	1/1:2,27:29:81.18:1027,81,0	1/1:0,20:20:54.18:711,54,0	1/1:1,18:19:54.18:711,54,0	1/1:0,19:19:51.17:671,51,0	1/1:2,20:22:45.15:590,45,0	1/1:3,29:32:75.24:987,75,0	0/0:27,0:27:78.19:0,78,838	0/0:25,0:24:60.14:0,60,645	0/0:17,0:17:45.07:0,45,465
chr10	16683691	.	TA	T	8073.61	PASS	AB=0.588;AC=51;AF=0.911;AN=56;BaseQRankSum=-3.212;DP=570;FS=2.080;HRun=12;HaplotypeScore=66.0390;InbreedingCoeff=0.7014;MQ=69.93;MQ0=2;MQRankSum=-2.308;QD=14.92;ReadPosRankSum=3.118;VQSLOD=5.8315;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,0:19:28.52:82,29,0	1/1:1,9:12:24.78:174,25,0	0/0:15,0:14:23.14:0,23,213	0/0:14,0:9:11.98:0,12,104	1/1:5,16:23:5.93:287,6,0	1/1:5,0:28:38.69:112,39,0	1/1:2,0:8:10.18:29,10,0	1/1:10,17:27:53.28:401,53,0	1/1:3,12:15:29.86:232,30,0	1/1:2,17:21:54.88:406,55,0	1/1:4,17:22:52.81:400,53,0	1/1:7,0:19:26.46:76,26,0	0/1:6,14:20:22.03:216,0,22	1/1:2,12:14:32.87:255,33,0	1/1:2,15:18:37.89:285,38,0	1/1:1,14:16:40.89:308,41,0	1/1:4,29:33:74.68:580,75,0	1/1:4,20:25:25.38:370,25,0	1/1:2,11:14:34.88:259,35,0	1/1:3,24:27:68.48:523,68,0	1/1:0,3:4:11:76,11,0	1/1:3,18:21:50.78:394,51,0	1/1:4,16:23:44.84:319,45,0	1/1:5,12:18:34.89:261,35,0	1/1:7,19:26:47.78:371,48,0	1/1:3,17:21:49.81:377,50,0	1/1:6,33:39:89.64:696,90,0	1/1:0,28:28:75.18:581,75,0
chr10	16686940	.	T	TA	6316.85	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-13.588;DP=558;FS=5.169;HRun=8;HaplotypeScore=50.7319;InbreedingCoeff=0.9916;MQ=82.76;MQ0=0;MQRankSum=-2.838;QD=29.80;ReadPosRankSum=2.932;VQSLOD=4.9844;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:69:0,69,621	1/1:2,9:11:27.08:312,27,0	0/0:19,0:18:19.67:0,20,250	0/0:14,0:14:29.93:0,30,264	1/1:4,28:32:81.20:920,81,0	0/0:19,0:19:50.97:0,51,449	0/0:13,0:13:12.34:0,12,273	0/0:24,0:24:66.03:0,66,601	0/0:12,0:12:33.01:0,33,302	1/1:2,20:22:60.18:693,60,0	1/1:3,27:30:78.15:882,78,0	0/0:11,0:11:30:0,30,270	0/0:14,0:14:42.02:0,42,384	0/0:14,0:14:33.01:0,33,302	1/1:4,21:25:57.17:658,57,0	0/0:23,0:23:60.03:0,60,549	1/1:0,25:25:72.21:831,72,0	0/0:15,0:15:45.02:0,45,412	0/0:13,0:13:39:0,39,348	0/0:36,0:36:93.02:0,93,846	0/0:15,0:15:35.99:0,36,323	0/0:21,0:21:60:0,60,539	0/0:25,0:25:75.01:0,75,679	0/0:12,0:12:30.02:0,30,275	0/0:20,0:20:60.03:0,60,549	1/1:5,29:34:87.23:983,87,0	1/1:0,27:25:75.22:865,75,0	1/1:0,6:6:15.04:173,15,0
chr10	16689089	.	AG	A	8692.35	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=9.094;DP=562;FS=54.699;HRun=1;HaplotypeScore=75.6074;InbreedingCoeff=0.9744;MQ=76.87;MQ0=0;MQRankSum=-3.243;QD=38.63;ReadPosRankSum=-1.977;VQSLOD=0.2026;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:41.95:0,42,639	0/0:14,0:14:42.11:0,42,584	0/0:18,0:18:54.11:0,54,757	0/0:12,0:12:30.07:0,30,430	0/0:39,0:39:99:0,117,1744	0/0:19,0:19:57.18:0,57,851	0/0:18,0:18:54.17:0,54,803	1/1:0,39:39:99:1555,114,0	1/1:3,19:22:66.20:891,66,0	0/0:26,0:26:78.25:0,78,1161	0/0:24,0:24:72.23:0,72,1081	0/0:23,0:23:69.23:0,69,1053	1/1:1,18:19:51.15:675,51,0	1/1:2,15:17:51.16:694,51,0	0/0:22,0:22:57.18:0,57,849	0/0:17,0:17:48.15:0,48,713	0/0:13,0:13:39.04:0,39,542	0/0:11,0:11:30.10:0,30,458	1/1:5,10:15:42.12:543,42,0	1/1:2,23:25:75.08:932,75,0	1/1:0,7:7:21.03:271,21,0	1/1:1,20:21:63.12:819,63,0	1/1:2,24:26:69.21:931,69,0	1/1:0,14:14:42.10:563,42,0	1/1:1,19:20:60.19:819,60,0	0/0:25,0:25:75.15:0,75,1080	0/0:36,0:36:99:0,108,1584	0/0:2,0:2:3.01:0,3,44
chr10	16689141	.	TAAAC	T	15610.30	PASS	AB=0.624;AC=42;AF=0.750;AN=56;BaseQRankSum=9.374;DP=596;FS=10.457;HRun=0;HaplotypeScore=120.3595;InbreedingCoeff=0.8061;MQ=63.06;MQ0=0;MQRankSum=0.762;QD=31.99;ReadPosRankSum=3.243;VQSLOD=4.2469;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:42.14:0,42,913	1/1:3,15:18:39.09:618,39,0	0/0:26,0:24:36.11:0,36,689	0/0:15,0:13:12.04:0,12,267	1/1:7,22:29:60.04:880,60,0	0/0:17,0:17:45.15:0,45,1096	0/0:12,0:12:27.09:0,27,644	1/1:15,17:32:51.13:751,51,0	1/1:4,19:23:63.11:941,63,0	1/1:5,17:22:51.17:849,51,0	1/1:14,20:34:51.17:849,51,0	0/0:22,0:22:45.12:0,45,958	1/1:4,16:20:48.13:770,48,0	1/1:7,15:22:45.11:719,45,0	1/1:6,22:28:57.19:949,57,0	1/1:6,12:18:24.04:370,24,0	0/1:5,13:18:15.99:513,0,16	1/1:4,14:18:36.12:599,36,0	1/1:5,12:17:39.13:649,39,0	1/1:8,17:25:60.11:916,60,0	1/1:3,10:13:24.04:370,24,0	1/1:4,19:23:59.89:765,60,0	1/1:10,17:27:63.02:882,63,0	0/1:8,8:16:5.54:389,0,6	1/1:7,13:20:42.04:616,42,0	1/1:6,20:26:60.19:970,60,0	1/1:11,24:35:69.24:1143,69,0	1/1:1,3:4:6.02:100,6,0
chr10	16689676	.	T	TTGTGTGTG	10330.54	PASS	AC=50;AF=1.000;AN=50;BaseQRankSum=-1.352;DP=611;FS=0.000;HRun=0;HaplotypeScore=197.8408;InbreedingCoeff=-0.0317;MQ=62.20;MQ0=19;MQRankSum=1.479;QD=19.27;ReadPosRankSum=1.648;VQSLOD=3.9884;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:25:19:404,19,0	1/1:14,0:14:11.91:263,12,0	./.	./.	1/1:26,0:25:6.04:180,6,0	1/1:30,0:29:21.54:511,22,0	1/1:14,0:13:6.49:87,6,0	./.	1/1:17,0:17:21.44:571,21,0	1/1:27,0:25:27.23:569,27,0	1/1:21,0:20:3.01:37,3,0	1/1:20,0:20:15.06:269,15,0	1/1:21,0:19:10.59:186,11,0	1/1:11,0:10:12.51:326,13,0	1/1:26,0:25:30.07:632,30,0	1/1:30,0:30:49.83:1115,50,0	1/1:13,8:18:9.46:94,9,0	1/1:14,0:14:23.99:408,24,0	1/1:20,0:19:18.06:454,18,0	1/1:22,0:23:15.52:341,16,0	1/1:11,0:9:3.01:96,3,0	1/1:29,0:28:24.53:572,25,0	1/1:20,0:20:18.53:501,19,0	1/1:20,0:16:11.60:340,12,0	1/1:26,0:26:21.99:454,22,0	1/1:27,0:27:37.83:554,38,0	1/1:29,0:29:43.39:946,43,0	1/1:12,0:9:22.61:420,23,0
chr10	16689711	.	TGAGAGAGAGAGAGAGAGAGAGA	T	1732.56	PASS	AB=0.828;AC=8;AF=0.160;AN=50;BaseQRankSum=-0.609;DP=475;FS=43.326;HRun=0;HaplotypeScore=250.5036;InbreedingCoeff=-0.1045;MQ=39.25;MQ0=35;MQRankSum=-3.242;QD=10.44;ReadPosRankSum=1.604;VQSLOD=1.4804;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:20:6.88:0,7,34	0/0:5,5:10:7.16:0,7,48	./.	./.	0/0:15,9:25:2.94:0,3,18	0/1:21,0:24:54.05:78,0,54	0/0:16,0:10:0.30:0,0,1	0/0:12,0:10:23.88:0,24,243	0/0:22,0:22:18.32:0,18,472	0/1:13,8:19:34.81:352,0,35	./.	0/0:13,0:14:10.21:0,10,43	0/0:16,0:14:11.40:0,11,249	0/0:16,0:13:3.01:0,3,48	0/1:17,7:23:7.72:8,0,43	0/1:20,0:24:76.20:199,0,76	0/1:13,1:12:2.53:15,0,3	0/0:13,0:13:13.16:0,13,123	0/0:15,0:12:26.97:0,27,603	0/0:19,0:19:18.13:0,18,917	0/0:13,0:8:2.92:0,3,17	0/0:27,0:24:6.91:0,7,287	0/0:16,0:16:11.96:0,12,129	0/0:17,0:13:14.88:0,15,532	0/0:20,0:19:14.29:0,14,593	0/1:15,3:19:8.32:840,0,8	0/1:19,0:21:99:205,0,182	0/1:11,0:8:65.84:160,0,66
chr10	16689751	.	AGG	A	542	PASS	AB=1.000;AC=18;AF=0.321;AN=56;BaseQRankSum=4.699;DP=438;FS=4.604;HRun=3;HaplotypeScore=108.0498;InbreedingCoeff=0.5145;MQ=50.87;MQ0=36;MQRankSum=1.877;QD=2.61;ReadPosRankSum=1.380;VQSLOD=-0.4825;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:10:8.93:0,9,66	0/0:8,0:8:11.89:0,12,91	0/1:20,0:10:18.86:19,0,92	0/0:19,0:10:10.22:0,10,148	0/0:18,0:18:11.96:0,12,98	0/0:22,0:19:47.61:0,48,348	0/0:9,0:7:12.01:0,12,108	1/1:27,0:23:25.63:192,26,0	1/1:21,0:21:10.95:62,11,0	0/0:17,0:17:17.99:0,18,185	0/0:14,0:13:17.95:0,18,153	0/0:11,0:10:26.83:0,27,205	0/1:22,0:22:0.40:44,0,0	0/1:16,0:14:0.21:1,0,0	0/0:17,0:17:11.89:0,12,86	0/0:12,0:12:22.33:0,22,170	0/0:15,0:12:29.74:0,30,215	0/0:12,0:11:26.89:0,27,213	0/1:13,0:11:13.41:112,0,13	1/1:15,2:17:19.08:165,19,0	1/1:15,0:9:1.55:4,2,0	0/1:19,0:18:21.71:22,0,32	1/1:16,0:16:2.77:15,3,0	0/0:11,0:10:8.48:0,8,64	1/1:10,5:14:5.28:73,5,0	0/0:15,0:14:31.77:0,32,212	0/0:16,0:16:7.76:0,8,177	0/1:7,0:5:0.34:0,0,0
chr10	16689761	.	A	AGG	3821.85	PASS	AB=0.567;AC=20;AF=0.357;AN=56;BaseQRankSum=-1.491;DP=482;FS=5.293;HRun=1;HaplotypeScore=102.1260;InbreedingCoeff=0.7865;MQ=58.53;MQ0=26;MQRankSum=0.653;QD=18.46;ReadPosRankSum=0.825;VQSLOD=1.2929;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:10:14.98:0,15,164	0/0:9,0:9:15.02:0,15,179	0/0:25,0:15:41.71:0,42,502	0/0:29,0:20:51.09:0,51,658	0/0:20,0:20:27.01:0,27,296	0/0:26,0:23:60.14:0,60,761	0/0:8,0:7:15.05:0,15,228	1/1:6,28:31:81.01:1250,81,0	1/1:5,17:22:4.30:158,4,0	0/0:19,0:19:44.71:0,45,564	0/0:14,0:13:21.06:0,21,288	0/0:11,0:10:27.09:0,27,374	1/1:2,18:20:6.02:93,6,0	0/1:2,14:14:0.01:0,0,0	0/0:17,0:17:30.01:0,30,313	0/0:14,0:14:30.36:0,30,389	0/0:13,0:12:30.10:0,30,423	0/0:12,0:12:30.09:0,30,437	1/1:5,11:15:33.07:529,33,0	1/1:20,0:20:51.08:772,51,0	1/1:5,8:9:2.99:58,3,0	1/1:2,15:16:9.03:166,9,0	1/1:1,17:19:3:54,3,0	0/1:4,8:11:10.13:70,0,10	1/1:18,0:17:47.74:671,48,0	0/0:23,0:22:63.14:0,63,786	0/0:16,0:16:38.99:0,39,492	0/0:7,0:5:11.11:0,11,77
chr10	16690857	.	TGG	T	1203.10	PASS	AB=0.938;AC=26;AF=0.464;AN=56;BaseQRankSum=-1.409;DP=352;FS=4.075;HRun=14;HaplotypeScore=52.5238;InbreedingCoeff=0.5518;MQ=67.07;MQ0=8;MQRankSum=-0.214;QD=6.68;ReadPosRankSum=5.710;VQSLOD=-0.6751;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:12,0:16:2.66:12,3,0	1/1:2,2:4:2.99:28,3,0	0/0:39,0:16:15.88:0,16,136	0/0:21,0:15:14.04:0,14,88	1/1:7,6:13:5.88:47,6,0	0/1:6,0:7:6.26:6,0,35	0/0:7,0:14:7.96:0,8,27	0/0:11,0:10:6.79:0,7,68	0/0:7,0:7:2.97:0,3,20	1/1:9,2:12:1.22:25,1,0	1/1:9,2:13:3:27,3,0	0/0:9,0:9:3:0,3,25	0/0:10,0:10:10.71:0,11,71	0/0:6,0:6:3.01:0,3,42	1/1:12,9:23:17.25:134,17,0	1/1:2,21:23:57.06:527,57,0	1/1:17,3:21:17.58:144,18,0	1/1:1,12:13:36.04:333,36,0	0/0:10,0:10:3.01:0,3,34	0/1:10,0:10:0.21:0,0,0	0/0:11,0:11:11.75:0,12,95	0/0:11,0:11:10.81:0,11,91	0/0:4,0:4:2.99:0,3,24	0/0:4,0:5:5.61:0,6,52	0/0:13,0:13:11.96:0,12,124	1/1:6,3:9:2.96:28,3,0	1/1:4,4:7:6:56,6,0	1/1:5,0:6:2.74:12,3,0
chr10	16691663	.	AACACACACAC	A	3031.64	PASS	AB=0.779;AC=20;AF=0.385;AN=52;BaseQRankSum=3.688;DP=559;FS=4.533;HRun=0;HaplotypeScore=170.9223;InbreedingCoeff=0.7082;MQ=64.00;MQ0=15;MQRankSum=-5.701;QD=13.18;ReadPosRankSum=2.458;VQSLOD=2.4776;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:12:24.08:0,24,663	0/0:9,0:9:8.67:0,9,383	./.	./.	0/0:15,0:28:12.68:0,13,552	0/0:22,0:22:51.18:0,51,2027	0/0:17,0:16:18.06:0,18,744	1/1:29,0:28:0.72:2,1,0	1/1:12,8:18:21.07:581,21,0	0/0:21,0:20:45.15:0,45,1771	0/0:20,0:20:12.04:0,12,492	0/0:11,0:15:15.05:0,15,569	1/1:14,6:20:12.04:310,12,0	1/1:8,5:12:6.02:178,6,0	0/0:17,0:17:18.03:0,18,641	0/0:4,0:11:27.07:0,27,987	0/0:26,0:24:24.08:0,24,844	0/0:14,0:19:15.30:0,15,473	1/1:9,2:12:8.77:171,9,0	0/1:21,5:25:29.97:252,0,30	1/1:15,0:15:2.75:81,3,0	0/1:14,9:22:6.72:350,0,7	1/1:14,12:26:9.17:267,9,0	1/1:21,2:23:12.04:273,12,0	1/1:12,10:22:27.09:750,27,0	0/0:31,0:31:57.19:0,57,2098	0/0:18,0:18:21.05:0,21,579	0/0:6,0:14:9.03:0,9,352
chr10	16692805	.	CT	C	3867.57	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=11.580;DP=440;FS=1.294;HRun=8;HaplotypeScore=41.7763;InbreedingCoeff=0.9489;MQ=67.07;MQ0=1;MQRankSum=-1.246;QD=24.48;ReadPosRankSum=3.320;VQSLOD=4.0676;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:99:0,99,1172	1/1:1,5:6:12.02:116,12,0	0/0:18,0:9:20.68:0,21,196	0/0:14,0:8:11.31:0,11,113	1/1:2,18:20:51.08:492,51,0	0/0:18,0:18:51.14:0,51,604	0/0:9,0:9:24.07:0,24,290	0/0:35,1:36:61.27:0,61,1000	0/0:5,0:5:12.04:0,12,145	1/1:0,18:18:54.04:508,54,0	1/1:0,14:14:36.05:348,36,0	0/0:9,0:9:24.07:0,24,290	0/0:14,0:14:36.11:0,36,434	0/0:13,0:13:33.09:0,33,388	1/1:2,17:19:45.07:435,45,0	0/0:9,0:9:21.06:0,21,254	1/1:0,27:27:72.12:695,72,0	0/0:21,0:21:57.11:0,57,659	0/0:18,0:18:48.14:0,48,570	0/0:20,0:20:45.14:0,45,544	0/0:9,0:9:27.08:0,27,326	0/0:2,0:2:6.02:0,6,72	0/0:8,0:8:24.07:0,24,290	0/0:8,0:8:21.06:0,21,254	0/0:18,0:18:51.16:0,51,616	1/1:3,19:22:57.09:551,57,0	1/1:2,28:30:69.02:666,69,0	1/1:0,2:2:6.01:58,6,0
chr10	16693986	.	C	CAAAA	3597.58	PASS	AB=1.000;AC=49;AF=0.875;AN=56;BaseQRankSum=-1.965;DP=412;FS=4.593;HRun=17;HaplotypeScore=83.8289;InbreedingCoeff=0.5118;MQ=41.50;MQ0=14;MQRankSum=-1.147;QD=9.13;ReadPosRankSum=1.618;VQSLOD=-0.4384;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:12,0:24:17.85:170,18,0	0/1:4,0:3:0:0,0,0	0/0:11,0:4:7.67:0,8,38	0/0:6,0:3:4.81:0,5,30	1/1:14,0:14:1.55:5,2,0	1/1:9,3:16:11.76:159,12,0	1/1:20,0:18:11.95:104,12,0	1/1:24,0:25:14.98:237,15,0	1/1:12,0:13:11.39:133,11,0	1/1:15,1:20:26.44:460,26,0	1/1:14,0:14:2.97:22,3,0	0/1:9,0:6:0:1,0,0	1/1:17,0:15:11.16:84,11,0	1/1:17,0:18:26.17:234,26,0	1/1:18,0:18:15.03:182,15,0	1/1:6,1:8:11.87:176,12,0	1/1:16,0:16:22.62:300,23,0	1/1:12,0:11:9.42:99,9,0	1/1:12,0:12:12:156,12,0	1/1:10,3:11:2.98:22,3,0	0/1:4,0:4:0:0,0,0	1/1:11,3:15:11.25:156,11,0	1/1:16,0:16:9.03:117,9,0	1/1:11,0:11:8.24:107,8,0	1/1:14,0:13:15.64:154,16,0	1/1:16,0:22:22.40:268,22,0	1/1:24,0:24:14.25:198,14,0	1/1:5,0:3:3.01:54,3,0
chr10	16694305	.	CA	C	16159.95	PASS	AB=0.875;AC=53;AF=0.946;AN=56;BaseQRankSum=1.270;DP=579;FS=10.706;HRun=6;HaplotypeScore=88.2805;InbreedingCoeff=0.6530;MQ=72.33;MQ0=0;MQRankSum=-5.294;QD=28.60;ReadPosRankSum=4.403;VQSLOD=4.7590;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,34:37:99:1096,102,0	1/1:1,11:12:30.08:322,30,0	0/0:14,0:14:28.30:0,28,321	0/1:6,1:7:18.27:18,0,97	1/1:0,24:24:66.03:680,66,0	1/1:0,21:21:57.14:613,57,0	1/1:1,16:17:45.11:484,45,0	1/1:3,20:23:60.15:645,60,0	1/1:1,20:21:60.15:645,60,0	1/1:0,32:32:93.19:991,93,0	1/1:3,14:17:42.10:451,42,0	1/1:2,27:29:81.20:871,81,0	1/1:0,21:21:63.16:677,63,0	1/1:3,27:30:75.19:806,75,0	1/1:1,21:22:57.14:613,57,0	1/1:1,16:17:42.11:451,42,0	1/1:1,32:33:90.16:967,90,0	1/1:0,17:17:48.12:516,48,0	1/1:0,15:15:45.10:476,45,0	1/1:3,17:20:48.12:516,48,0	1/1:0,15:15:39.10:419,39,0	1/1:2,9:11:30.06:312,30,0	1/1:3,27:30:78.20:838,78,0	1/1:2,11:13:30.07:322,30,0	1/1:2,15:17:42.10:451,42,0	1/1:0,26:26:78.16:821,78,0	1/1:1,23:24:69.17:741,69,0	1/1:0,14:14:39.10:419,39,0
chr10	16694440	.	CACACATACACATACACAG	C	2301.55	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.220;DP=706;FS=7.941;HRun=0;HaplotypeScore=318.4007;InbreedingCoeff=0.9630;MQ=73.35;MQ0=0;MQRankSum=-7.306;QD=62.20;ReadPosRankSum=1.139;VQSLOD=1.7925;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:62,0:62:99:0,161,13072	0/0:8,0:8:21.07:0,21,1366	0/0:32,0:27:50.90:0,51,3310	0/0:48,0:46:99:0,110,6327	0/0:8,0:8:24.08:0,24,1966	0/0:22,0:22:54.13:0,54,3887	0/0:28,0:28:75.22:0,75,5146	0/0:32,0:32:90.22:0,90,6619	0/0:25,0:25:72.23:0,72,5385	0/0:31,0:31:93.31:0,93,7023	0/0:10,0:10:21.07:0,21,1606	0/0:29,0:29:72.23:0,72,4676	0/0:20,0:20:60.21:0,60,4724	0/0:28,0:28:72.23:0,72,5549	0/0:25,0:25:66.20:0,66,4701	1/1:4,20:24:42.14:2000,42,0	0/0:26,0:26:75.21:0,75,5758	1/1:1,12:13:9.03:416,9,0	0/0:15,0:15:45.15:0,45,2894	0/0:26,0:26:72.25:0,72,5800	0/0:45,0:45:99:0,120,8692	0/0:20,0:20:57.18:0,57,4302	0/0:15,0:15:39.12:0,39,2774	0/0:36,0:36:99:0,102,7721	0/0:25,0:25:69.23:0,69,4914	0/0:26,0:26:75.23:0,75,5359	0/0:19,0:19:57.20:0,57,4152	0/0:8,0:8:24.04:0,24,1649
chr10	16694920	.	G	GT	22958.30	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-7.950;DP=692;FS=7.766;HRun=4;HaplotypeScore=54.8084;InbreedingCoeff=0.9973;MQ=82.33;MQ0=0;MQRankSum=-8.786;QD=35.05;ReadPosRankSum=5.260;VQSLOD=4.9267;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,26:30:72.71:973,73,0	1/1:0,10:10:21.07:287,21,0	0/0:14,0:14:30.05:0,30,312	0/0:23,0:23:50.64:0,51,528	1/1:2,29:31:87.24:1162,87,0	1/1:1,25:26:66.22:903,66,0	1/1:1,19:20:51.17:697,51,0	1/1:3,34:37:99:1351,102,0	1/1:0,25:25:75.25:1025,75,0	1/1:2,40:42:99:1510,114,0	1/1:0,13:13:39.13:533,39,0	1/1:3,28:31:78.26:1062,78,0	1/1:2,25:27:69.23:934,69,0	1/1:1,29:30:81.27:1108,81,0	1/1:3,26:29:60.20:820,60,0	1/1:1,29:29:60.20:821,60,0	1/1:0,27:26:72.24:984,72,0	1/1:0,14:14:33.08:431,33,0	1/1:2,20:22:60.18:785,60,0	1/1:1,18:19:51.10:674,51,0	1/1:0,19:19:51.17:697,51,0	1/1:3,22:25:60.20:821,60,0	1/1:1,17:18:48.16:656,48,0	1/1:1,25:26:69.23:943,69,0	1/1:2,20:22:54.18:739,54,0	1/1:1,32:33:96.29:1279,96,0	1/1:3,34:37:96.32:1312,96,0	1/1:0,12:12:33.07:451,33,0
chr10	16695443	.	AAAAG	A	3979.17	PASS	AB=0.990;AC=30;AF=0.556;AN=54;BaseQRankSum=-3.606;DP=508;FS=13.547;HRun=0;HaplotypeScore=84.8421;InbreedingCoeff=0.5236;MQ=64.70;MQ0=16;MQRankSum=0.657;QD=12.55;ReadPosRankSum=-6.068;VQSLOD=-0.2949;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:29:23.51:0,24,324	1/1:10,0:10:26.02:216,26,0	0/0:41,0:13:11.58:0,12,182	0/0:31,0:11:10.67:0,11,90	1/1:24,2:26:51.89:414,52,0	0/0:17,0:17:21.03:0,21,265	0/0:8,0:8:9.81:0,10,170	0/1:19,0:18:41.22:100,0,41	0/0:14,0:14:2.51:0,3,11	1/1:19,1:20:37.22:441,37,0	1/1:19,0:19:45.43:399,45,0	0/0:12,0:12:13.53:0,14,330	1/1:13,0:12:14.45:165,14,0	1/1:12,0:12:12.99:92,13,0	0/1:14,1:15:8.60:166,0,9	0/0:12,0:11:23.99:0,24,284	1/1:30,0:29:37.64:370,38,0	0/0:24,0:24:56.25:0,56,739	0/1:15,0:14:9.85:107,0,10	0/1:31,0:30:77.95:134,0,78	0/1:2,0:2:2.29:14,0,2	1/1:7,0:7:10.54:52,11,0	0/1:16,0:16:9.78:84,0,10	./.	1/1:19,0:18:8.23:159,8,0	1/1:25,0:24:58.23:489,58,0	1/1:21,0:21:36.39:349,36,0	1/1:16,1:16:13.18:228,13,0
chr10	16695446	.	AG	A	5907.11	PASS	AB=0.945;AC=42;AF=0.778;AN=54;BaseQRankSum=-0.470;DP=502;FS=51.563;HRun=1;HaplotypeScore=57.3590;InbreedingCoeff=0.4693;MQ=68.08;MQ0=16;MQRankSum=-0.797;QD=14.10;ReadPosRankSum=-2.804;VQSLOD=1.0961;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:27:23.67:24,0,187	1/1:10,0:10:25.97:190,26,0	0/1:35,4:16:14.85:15,0,123	0/0:31,0:12:6.28:0,6,59	1/1:24,1:25:61.48:424,61,0	0/0:17,0:17:9.53:0,10,102	0/1:6,1:7:7.08:7,0,79	1/1:21,1:21:51.09:357,51,0	1/1:1,13:14:2.97:20,3,0	1/1:22,0:22:60.47:447,60,0	1/1:18,0:19:43.86:372,44,0	0/1:11,0:11:21.95:22,0,125	1/1:13,0:12:34.06:255,34,0	1/1:12,0:12:30.14:233,30,0	1/1:15,0:15:31.28:229,31,0	0/0:11,1:11:23.87:0,24,186	1/1:29,0:28:73.47:556,73,0	0/0:22,0:22:2.69:0,3,306	1/1:2,13:14:32.74:252,33,0	1/1:28,3:30:82.12:673,82,0	1/1:3,0:3:8.80:57,9,0	1/1:0,7:7:13.08:79,13,0	1/1:16,0:16:42.10:282,42,0	./.	1/1:18,0:17:41.23:329,41,0	1/1:24,0:23:67.37:533,67,0	1/1:21,2:23:53.96:359,54,0	1/1:15,0:14:12.91:193,13,0
chr10	16697864	.	CT	C	430.32	PASS	AB=0.816;AC=14;AF=0.259;AN=54;BaseQRankSum=-4.039;DP=475;FS=7.750;HRun=17;HaplotypeScore=107.5316;InbreedingCoeff=0.3630;MQ=68.25;MQ0=8;MQRankSum=4.648;QD=2.71;ReadPosRankSum=5.266;VQSLOD=-0.3083;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:30:11.78:0,12,234	0/1:6,1:8:14.51:15,0,16	0/0:13,0:11:4.92:0,5,26	0/1:13,0:12:5.09:5,0,56	1/1:22,3:25:0.76:63,1,0	0/0:18,1:18:6.97:0,7,136	0/0:8,0:9:0.99:0,1,82	0/0:21,0:28:44.90:0,45,215	0/0:8,0:22:20.57:0,21,97	1/1:9,15:26:38.61:210,39,0	0/1:10,5:15:23.30:35,0,23	0/0:21,0:21:24.39:0,24,176	0/0:13,0:14:17.99:0,18,93	0/0:12,0:15:21.47:0,21,117	0/0:5,5:10:3.88:0,4,26	0/0:13,1:14:0.40:0,0,101	1/1:10,6:16:9.92:53,10,0	0/0:16,1:16:3.25:0,3,67	0/0:17,0:18:19.08:0,19,153	0/0:14,0:18:30.64:0,31,159	./.	0/0:13,0:16:31.14:0,31,161	0/0:8,0:13:17.05:0,17,82	0/0:7,0:6:3.41:0,3,19	0/0:15,0:28:44.42:0,44,244	1/1:12,11:25:29.06:157,29,0	0/1:14,5:23:31.97:32,0,40	1/1:3,1:4:2.88:17,3,0
chr10	16698760	.	T	TTAAATAAA	5804.30	PASS	AB=1.000;AC=41;AF=0.976;AN=42;DP=313;FS=0.000;HRun=0;HaplotypeScore=75.1679;InbreedingCoeff=0.1077;MQ=52.17;MQ0=4;QD=21.90;VQSLOD=3.3547;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,0:15:14.97:122,15,0	1/1:3,2:5:6.02:245,6,0	./.	./.	./.	1/1:6,0:17:26.94:220,27,0	1/1:1,0:3:2.99:24,3,0	1/1:40,0:40:36.11:925,36,0	1/1:2,0:5:9.03:309,9,0	1/1:5,3:9:12.02:392,12,0	1/1:7,3:14:24:673,24,0	1/1:9,0:11:5.99:49,6,0	1/1:10,0:10:9.03:272,9,0	./.	1/1:9,1:9:3.01:123,3,0	1/1:5,4:10:12.04:491,12,0	1/1:14,0:14:6.91:186,7,0	1/1:9,2:12:9.03:326,9,0	1/1:19,0:19:9.03:160,9,0	1/1:9,0:11:6.02:206,6,0	0/1:6,0:7:0:0,0,0	./.	./.	./.	1/1:11,0:11:9.03:246,9,0	1/1:4,1:5:3.01:123,3,0	1/1:14,3:18:12.04:486,12,0	1/1:14,0:13:11.97:225,12,0
chr10	16702069	.	T	TA	692.53	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-3.152;DP=540;FS=5.447;HRun=7;HaplotypeScore=49.8491;InbreedingCoeff=0.9807;MQ=69.58;MQ0=0;MQRankSum=-3.648;QD=22.34;ReadPosRankSum=0.904;VQSLOD=3.2700;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:60.10:0,60,579	0/0:7,0:7:18.03:0,18,174	0/0:12,0:11:19.56:0,20,170	0/0:9,0:9:14.95:0,15,126	0/0:30,0:30:84.09:0,84,792	0/0:22,0:22:60.06:0,60,567	0/0:15,0:15:42.05:0,42,398	0/0:40,0:40:99:0,111,1052	0/0:17,0:17:42.06:0,42,405	0/0:15,0:15:45.07:0,45,431	0/0:20,0:20:51.06:0,51,483	0/0:21,0:21:50.99:0,51,472	0/0:13,0:13:30.04:0,30,289	0/0:13,0:13:36.05:0,36,344	0/0:16,0:16:45.06:0,45,429	1/1:3,11:14:27.08:325,27,0	0/0:30,0:30:87.06:0,87,817	1/1:1,16:17:42.09:489,42,0	0/0:22,0:22:63.08:0,63,600	0/0:28,0:28:81.10:0,81,768	0/0:18,0:18:51.02:0,51,477	0/0:8,0:8:21.02:0,21,197	0/0:20,0:20:54.08:0,54,521	0/0:10,0:9:24.03:0,24,232	0/0:31,0:31:81.06:0,81,757	0/0:24,0:24:69.09:0,69,658	0/0:32,0:32:84.11:0,84,804	0/0:14,0:14:39.06:0,39,375
chr10	16702612	.	CA	C	569.60	PASS	AB=0.575;AC=1;AF=0.018;AN=56;BaseQRankSum=3.013;DP=731;FS=3.165;HRun=1;HaplotypeScore=96.7695;InbreedingCoeff=-0.0227;MQ=80.96;MQ0=0;MQRankSum=-0.832;QD=24.77;ReadPosRankSum=-0.330;VQSLOD=3.5018;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:99:0,99,1537	0/0:11,0:11:33.10:0,33,502	0/0:27,0:27:81.25:0,81,1245	0/0:14,1:15:5.13:0,5,551	0/0:30,0:30:90.28:0,90,1392	0/0:42,0:42:99:0,126,1988	0/0:20,0:20:60.20:0,60,950	0/0:33,0:33:99:0,99,1520	0/0:13,0:13:39.13:0,39,621	0/0:38,0:38:99:0,114,1791	0/0:43,0:43:99:0,129,2029	0/0:22,0:22:66.22:0,66,1047	0/0:35,0:35:99:0,105,1673	0/0:22,0:22:66.23:0,66,1055	0/0:33,0:33:99:0,99,1573	0/0:35,0:35:99:0,105,1650	0/0:16,0:16:48.16:0,48,767	0/0:7,0:7:21.07:0,21,335	0/0:29,0:29:87.28:0,87,1349	0/0:29,0:29:87.30:0,87,1391	0/0:20,0:20:60.20:0,60,959	0/0:31,0:31:93.30:0,93,1464	0/0:19,0:19:54.18:0,54,853	0/1:6,17:23:99:644,0,219	0/0:20,0:20:57.19:0,57,906	0/0:38,0:37:99:0,114,1795	0/0:29,0:29:87.30:0,87,1383	0/0:18,0:17:51.14:0,51,766
chr10	16703849	.	TA	T	7227.97	PASS	AC=40;AF=0.741;AN=54;BaseQRankSum=4.276;DP=339;FS=1.935;HRun=4;HaplotypeScore=32.1772;InbreedingCoeff=0.8554;MQ=54.69;MQ0=10;MQRankSum=-0.347;QD=27.80;ReadPosRankSum=-2.052;VQSLOD=2.7859;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:18:33.11:0,33,462	1/1:0,4:4:9.03:108,9,0	1/1:2,0:1:1.25:3,1,0	0/0:5,0:3:8.50:0,9,75	1/1:4,29:33:75.23:900,75,0	0/0:13,0:13:33.11:0,33,462	0/0:6,0:5:6.02:0,6,84	1/1:7,20:21:60.18:719,60,0	1/1:1,10:11:27.08:324,27,0	1/1:0,20:20:57.16:672,57,0	1/1:0,11:11:27.08:321,27,0	0/0:9,0:9:21.07:0,21,285	1/1:0,7:7:18.06:216,18,0	1/1:0,8:8:18.05:214,18,0	1/1:0,9:9:24.07:286,24,0	0/0:6,0:6:18.06:0,18,252	1/1:3,24:26:46.96:545,47,0	0/0:18,0:18:36.12:0,36,504	1/1:0,11:11:30.09:359,30,0	1/1:2,8:9:21.06:252,21,0	1/1:0,4:3:6.02:72,6,0	1/1:1,1:2:3.01:36,3,0	1/1:1,3:4:6.02:72,6,0	./.	1/1:0,17:17:39.12:466,39,0	1/1:1,22:22:66.19:779,66,0	1/1:1,19:20:42.41:600,42,0	1/1:2,8:9:24.07:285,24,0
chr10	16704544	.	A	AACAC	4768.42	PASS	AB=0.958;AC=41;AF=0.732;AN=56;BaseQRankSum=-6.563;DP=781;FS=6.045;HRun=0;HaplotypeScore=168.3058;InbreedingCoeff=-0.0061;MQ=52.75;MQ0=18;MQRankSum=2.966;QD=6.54;ReadPosRankSum=-3.997;VQSLOD=2.6863;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:20,20:42:16.59:222,17,0	0/1:16,0:16:40.30:48,0,40	0/1:33,0:5:10.27:10,0,29	0/1:37,0:8:5.81:6,0,9	0/1:27,0:27:0.81:123,0,1	1/1:8,12:23:5.93:146,6,0	0/1:19,19:41:14.26:189,0,14	1/1:37,0:37:63.69:788,64,0	1/1:24,0:23:15.61:191,16,0	0/1:35,0:35:70.89:104,0,71	0/1:23,0:23:67.25:67,0,100	1/1:9,20:31:2.71:54,3,0	1/1:24,0:24:23.75:275,24,0	1/1:22,0:22:24.09:324,24,0	0/1:29,0:29:40.11:138,0,40	0/0:21,0:21:13.05:0,13,119	0/1:21,0:23:21.81:64,0,22	0/1:16,0:15:21.18:21,0,22	1/1:18,0:16:26.82:338,27,0	1/1:23,0:23:37.22:431,37,0	1/1:58,0:55:3.86:117,4,0	1/1:20,0:20:21.98:161,22,0	1/1:21,0:21:5.58:212,6,0	1/1:40,0:39:27.81:427,28,0	0/0:31,0:30:18.79:0,19,117	1/1:31,0:30:16:280,16,0	0/1:20,0:20:27.83:28,0,51	1/1:12,0:11:2.03:6,2,0
chr10	16705447	.	T	TAA	4874.26	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-10.822;DP=500;FS=20.224;HRun=9;HaplotypeScore=63.8664;InbreedingCoeff=0.9863;MQ=85.82;MQ0=0;MQRankSum=-1.501;QD=34.82;ReadPosRankSum=1.868;VQSLOD=3.6686;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:78.19:0,78,830	1/1:0,3:5:11.53:146,12,0	0/0:14,0:14:17.90:0,18,329	0/0:19,0:19:26.83:0,27,357	1/1:6,22:29:65.68:953,66,0	0/0:15,0:15:33.07:0,33,351	0/0:8,0:8:18.01:0,18,192	0/0:31,0:31:81.18:0,81,862	0/0:14,0:14:36.08:0,36,383	1/1:7,14:23:45.15:664,45,0	1/1:3,14:17:42.10:612,42,0	0/0:5,0:5:15.04:0,15,160	0/0:27,0:27:72.16:0,72,766	0/0:23,0:23:69.15:0,69,726	1/1:3,14:17:42.13:618,42,0	0/0:20,0:20:57.14:0,57,607	1/1:3,8:11:27.08:395,27,0	0/0:5,0:5:15.04:0,15,160	0/0:25,0:25:63.12:0,63,663	0/0:23,0:25:62.83:0,63,698	0/0:23,0:23:57.13:0,57,607	0/0:16,0:17:41.82:0,42,427	0/0:28,0:28:72.15:0,72,766	0/0:11,0:11:33.08:0,33,351	0/0:22,0:22:54.09:0,54,565	1/1:2,10:13:32.60:469,33,0	1/1:2,15:17:42.14:647,42,0	1/1:0,8:8:24.08:369,24,0
chr10	16705528	.	A	AG	1166.27	PASS	AB=0.821;AC=16;AF=0.308;AN=52;BaseQRankSum=-8.288;DP=384;FS=2.126;HRun=8;HaplotypeScore=59.5696;InbreedingCoeff=0.8051;MQ=80.95;MQ0=1;MQRankSum=-0.176;QD=17.41;ReadPosRankSum=-2.784;VQSLOD=3.0861;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:42.01:0,42,384	1/1:0,1:1:3.01:35,3,0	0/1:10,0:9:2.43:2,0,119	0/0:13,0:13:18:0,18,164	1/1:1,3:4:6.02:69,6,0	0/0:10,0:11:26:0,26,217	0/0:6,0:6:11.99:0,12,105	0/0:28,0:28:54:0,54,494	0/0:28,0:28:71.98:0,72,658	1/1:2,7:9:21.05:233,21,0	0/1:4,5:9:3.40:218,0,3	0/0:11,0:11:27.01:0,27,247	0/0:25,0:25:65.98:0,66,599	0/0:22,0:22:41.95:0,42,382	1/1:2,3:5:12.03:131,12,0	0/0:8,0:8:18.01:0,18,165	1/1:2,11:13:30.09:346,30,0	./.	0/0:23,0:23:50.95:0,51,463	0/0:22,0:22:47.99:0,48,439	0/0:23,0:23:59.98:0,60,549	0/0:19,0:19:38.91:0,39,343	0/0:26,0:26:53.98:0,54,493	0/0:15,0:15:39.01:0,39,357	0/0:16,0:16:36:0,36,329	1/1:5,3:8:15.04:173,15,0	1/1:5,3:8:12.04:138,12,0	./.
chr10	16706338	.	AAC	A	1605.60	PASS	AB=0.686;AC=19;AF=0.365;AN=52;BaseQRankSum=-3.977;DP=519;FS=6.770;HRun=0;HaplotypeScore=104.1286;InbreedingCoeff=0.5731;MQ=62.74;MQ0=10;MQRankSum=3.369;QD=8.63;ReadPosRankSum=5.215;VQSLOD=2.1900;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:29:9.01:0,9,95	1/1:2,1:3:3.01:33,3,0	./.	./.	0/1:12,7:21:15.69:212,0,16	0/0:11,0:20:20.99:0,21,182	0/0:18,0:27:12.01:0,12,122	0/0:26,0:26:17.92:0,18,152	0/0:14,0:21:17.96:0,18,154	1/1:10,10:20:24.91:268,25,0	1/1:7,10:18:17.88:180,18,0	0/0:15,0:15:24.04:0,24,272	0/0:11,0:16:12.48:0,12,116	0/0:9,0:9:8.97:0,9,92	0/1:6,8:17:12.68:242,0,13	1/1:7,1:15:20.05:117,20,0	1/1:10,6:18:2.53:203,3,0	1/1:14,0:17:7.26:40,7,0	0/0:14,0:14:7.76:0,8,64	0/0:10,0:14:9.11:0,9,44	0/0:24,0:23:15.02:0,15,166	0/0:9,0:10:3.47:0,3,27	0/0:10,0:13:0.24:0,0,1	0/0:12,0:13:5.71:0,6,51	0/0:9,0:11:5.72:0,6,52	1/1:12,2:18:14.54:108,15,0	1/1:10,9:20:26.74:261,27,0	0/1:12,6:17:4.91:118,0,5
chr10	16706611	.	C	CAACA	2984.53	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=0.450;DP=456;FS=2.106;HRun=0;HaplotypeScore=93.0504;InbreedingCoeff=0.1490;MQ=46.62;MQ0=19;MQRankSum=-5.914;QD=10.05;ReadPosRankSum=0.149;VQSLOD=2.9766;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:26:27.32:0,27,419	1/1:3,0:3:8.93:70,9,0	0/0:37,0:5:0.42:0,0,51	0/0:29,0:8:4.79:0,5,52	0/1:23,0:22:9.79:195,0,10	0/0:14,0:13:33.81:0,34,386	0/0:9,0:8:14.68:0,15,114	0/1:20,0:16:7.96:202,0,8	1/1:4,5:12:9.02:113,9,0	0/1:24,0:23:12.59:199,0,13	1/1:24,1:24:36.08:385,36,0	0/0:13,0:12:26.38:0,26,244	1/1:14,0:11:12.73:93,13,0	0/1:12,0:9:24.99:94,0,25	0/1:13,0:11:4.66:170,0,5	0/0:15,0:15:38.92:0,39,481	0/1:17,0:15:13.50:164,0,13	0/0:11,0:11:17.53:0,18,138	0/1:17,0:13:31.55:84,0,32	1/1:13,0:12:30.08:232,30,0	0/1:16,0:16:30.24:170,0,30	1/1:2,0:2:5.84:39,6,0	1/1:13,0:12:3.75:190,4,0	0/1:7,0:6:8.96:9,0,18	0/1:13,0:13:20.20:103,0,20	1/1:22,0:22:13.78:336,14,0	1/1:17,0:16:24.05:239,24,0	0/1:10,0:9:57.60:83,0,58
chr10	16706613	.	A	AC	1666.92	PASS	AB=0.868;AC=28;AF=0.500;AN=56;BaseQRankSum=1.678;DP=469;FS=22.556;HRun=0;HaplotypeScore=76.9900;InbreedingCoeff=0.2227;MQ=46.53;MQ0=21;MQRankSum=-2.027;QD=5.59;ReadPosRankSum=-2.929;VQSLOD=1.3325;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:26:51.51:0,52,443	1/1:2,1:3:8.80:57,9,0	0/0:40,0:5:11.38:0,11,70	0/0:30,0:8:2.42:0,2,48	0/1:16,5:21:6.89:110,0,7	0/0:14,0:12:34.17:0,34,329	0/0:11,0:9:17.88:0,18,146	0/1:20,2:17:19.70:163,0,20	1/1:11,1:12:8.35:46,8,0	0/1:16,6:21:5.77:148,0,6	1/1:20,3:23:37.23:229,37,0	0/0:13,0:12:26.48:0,26,239	0/1:14,1:12:11.23:42,0,11	0/1:12,1:11:30.39:62,0,30	1/1:13,0:11:19.98:100,20,0	0/0:15,0:15:42.04:0,42,460	0/1:17,1:16:26.90:65,0,27	0/0:12,0:11:13.97:0,14,144	0/1:17,1:13:17.53:82,0,18	1/1:11,3:13:28.12:168,28,0	0/1:10,6:16:5.25:113,0,5	1/1:3,0:3:5.83:38,6,0	1/1:9,3:12:8.01:101,8,0	0/0:7,1:7:1:0,1,11	0/1:12,1:12:13.38:60,0,13	1/1:19,1:23:21.80:173,22,0	1/1:17,1:18:9.43:60,9,0	0/1:8,2:9:34.71:35,0,71
chr10	16706614	.	A	AAC	201.02	PASS	AB=0.920;AC=16;AF=0.286;AN=56;BaseQRankSum=6.401;DP=473;FS=3.319;HRun=0;HaplotypeScore=89.9563;InbreedingCoeff=-0.2950;MQ=47.94;MQ0=22;MQRankSum=-1.057;QD=0.72;ReadPosRankSum=2.630;VQSLOD=1.6849;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:26:51.66:0,52,476	0/0:3,0:3:5.99:0,6,25	0/0:41,0:6:11.75:0,12,102	0/1:31,0:8:7.09:7,0,51	0/1:19,3:21:10.56:11,0,144	0/0:15,0:13:35.81:0,36,365	0/0:11,0:9:20.84:0,21,171	0/1:20,0:15:16.89:17,0,108	1/1:12,1:12:2.74:19,3,0	0/1:19,5:23:39.18:39,0,133	0/1:21,3:23:13.88:14,0,96	0/0:12,0:11:23.94:0,24,251	0/1:14,1:12:13.43:13,0,34	0/0:14,0:11:15.61:0,16,151	0/1:14,0:11:16.52:17,0,71	0/0:15,0:15:42.04:0,42,494	0/1:18,1:17:0.36:0,0,112	0/0:12,0:11:20.64:0,21,190	0/0:18,0:13:0.84:0,1,78	0/1:11,2:12:17.08:17,0,21	0/1:14,3:17:43.75:44,0,120	0/0:3,0:3:2.18:0,2,18	0/1:12,1:12:23.95:24,0,46	0/0:7,0:7:2.79:0,3,36	0/0:13,0:12:13.58:0,14,120	0/1:25,0:24:52.90:53,0,56	0/1:18,1:18:57.06:57,0,60	0/1:8,2:9:16.44:16,0,139
chr10	16706807	.	T	TA	2569.88	PASS	AB=0.742;AC=25;AF=0.446;AN=56;BaseQRankSum=-9.204;DP=492;FS=12.664;HRun=13;HaplotypeScore=65.9820;InbreedingCoeff=0.7138;MQ=57.04;MQ0=12;MQRankSum=-1.495;QD=11.22;ReadPosRankSum=-1.840;VQSLOD=1.4612;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:15:29.63:0,30,204	0/0:1,0:5:9.03:0,9,25	0/0:25,0:7:5.34:0,5,36	0/1:38,0:14:10.13:10,0,28	0/0:3,0:26:43.71:0,44,138	0/0:20,0:21:25.24:0,25,285	0/0:14,0:13:20.76:0,21,144	1/1:4,22:25:59.95:523,60,0	1/1:2,7:10:17.86:154,18,0	0/0:2,0:14:24.22:0,24,70	0/0:5,0:22:35.80:0,36,115	0/0:11,0:11:22.38:0,22,148	0/1:4,5:10:8.26:58,0,8	1/1:2,14:16:15.46:286,15,0	0/0:4,0:20:20.05:0,20,58	1/1:0,9:10:17.86:153,18,0	0/0:11,0:27:20.35:0,20,79	1/1:6,15:20:24.03:223,24,0	1/1:12,14:24:6.62:319,7,0	1/1:3,17:22:30.07:386,30,0	1/1:0,7:7:15.02:139,15,0	1/1:3,0:3:3:28,3,0	0/1:4,7:12:37.52:77,0,38	1/1:1,7:8:15.02:139,15,0	1/1:4,14:18:15.46:285,15,0	0/0:10,0:32:57.81:0,58,217	0/0:3,0:18:29.37:0,29,84	0/0:3,0:7:8.12:0,8,23
chr10	16706986	.	CT	C	8786.45	PASS	AB=0.769;AC=52;AF=0.929;AN=56;BaseQRankSum=-5.385;DP=583;FS=0.000;HRun=11;HaplotypeScore=66.6940;InbreedingCoeff=0.5613;MQ=71.93;MQ0=10;MQRankSum=0.247;QD=16.45;ReadPosRankSum=3.166;VQSLOD=5.7374;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,14:16:32:251,32,0	1/1:0,6:6:17.91:140,18,0	0/0:46,1:23:31.64:0,32,229	0/1:41,0:18:5.02:5,0,72	1/1:5,22:27:21.84:386,22,0	1/1:0,21:21:56.94:468,57,0	1/1:1,15:17:37.99:301,38,0	1/1:11,38:50:99:964,119,0	1/1:0,9:9:20.98:172,21,0	1/1:5,28:31:79.91:650,80,0	1/1:3,12:15:38.95:319,39,0	1/1:2,14:16:38.95:320,39,0	1/1:3,12:15:32.96:271,33,0	1/1:3,12:15:29.96:246,30,0	1/1:3,19:22:38.69:320,39,0	1/1:2,19:22:55.97:449,56,0	1/1:4,25:29:39.68:469,40,0	1/1:2,14:17:23.30:305,23,0	1/1:4,14:19:11.90:293,12,0	1/1:6,17:23:50.91:418,51,0	1/1:1,11:12:20.98:172,21,0	1/1:3,4:7:5.97:49,6,0	0/1:2,12:14:2:192,0,2	1/1:0,9:9:20.98:172,21,0	1/1:1,12:13:26.97:221,27,0	1/1:3,20:23:59.92:492,60,0	1/1:3,26:29:59.92:493,60,0	1/1:1,12:13:29.96:246,30,0
chr10	16710297	.	A	AGAG	21816.84	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-14.038;DP=773;FS=12.991;HRun=0;HaplotypeScore=100.8703;InbreedingCoeff=0.9983;MQ=58.50;MQ0=4;MQRankSum=0.705;QD=41.79;ReadPosRankSum=3.528;VQSLOD=5.7031;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,129,1995	1/1:3,12:15:30.10:643,30,0	0/0:27,0:16:36.09:0,36,483	0/0:31,0:21:31.64:0,32,688	1/1:3,18:21:42.14:888,42,0	0/0:20,0:20:57.19:0,57,904	0/0:28,0:28:78.13:0,78,1092	1/1:4,7:13:24.03:436,24,0	1/1:3,31:34:69.24:1505,69,0	1/1:9,25:33:72.25:1569,72,0	1/1:1,21:24:36.12:756,36,0	0/0:32,0:32:84.29:0,84,1323	1/1:5,29:34:71.96:1570,72,0	1/1:2,29:30:63.22:1376,63,0	1/1:4,23:27:54.19:1180,54,0	0/0:33,0:33:93.31:0,93,1455	1/1:8,25:34:69.19:1461,69,0	0/0:30,0:30:78.23:0,78,1181	1/1:3,8:9:21.06:419,21,0	1/1:5,33:39:69.24:1478,69,0	1/1:4,29:34:63.22:1338,63,0	1/1:4,21:24:51.17:1056,51,0	1/1:3,15:18:23.43:515,23,0	1/1:4,16:20:36.07:786,36,0	1/1:8,14:21:39.13:851,39,0	1/1:6,29:35:93.28:1895,93,0	1/1:2,30:30:59.80:1309,60,0	1/1:4,12:15:36.12:786,36,0
chr10	16712184	.	AT	A	591.40	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.890;DP=558;FS=0.738;HRun=9;HaplotypeScore=50.2370;InbreedingCoeff=0.9364;MQ=68.91;MQ0=0;MQRankSum=0.529;QD=15.56;ReadPosRankSum=1.114;VQSLOD=3.5298;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:69.18:0,69,785	0/0:12,0:12:33.09:0,33,372	0/0:9,0:10:21.05:0,21,226	0/0:6,0:6:14.93:0,15,128	0/0:31,0:32:90.10:0,90,1014	0/0:23,0:23:66.18:0,66,752	0/0:10,0:10:27.08:0,27,312	0/0:37,0:37:96.26:0,96,1090	0/0:13,0:13:36.09:0,36,405	0/0:26,0:26:66.19:0,66,755	0/0:29,0:29:81.24:0,81,935	0/0:14,0:14:30.09:0,30,346	0/0:19,0:19:54.16:0,54,623	0/0:18,0:18:51.15:0,51,588	0/0:21,0:21:51.15:0,51,589	1/1:5,18:23:10.40:350,10,0	0/0:23,0:23:63.19:0,63,727	1/1:1,14:15:39.02:357,39,0	0/0:17,0:17:45.12:0,45,510	0/0:34,0:35:93.11:0,93,1053	0/0:11,0:11:27.08:0,27,312	0/0:20,0:20:54.15:0,54,613	0/0:24,0:24:72.19:0,72,812	0/0:13,0:13:36.09:0,36,406	0/0:22,0:22:63.18:0,63,719	0/0:29,0:29:78.22:0,78,892	0/0:27,0:27:78.19:0,78,885	0/0:3,0:3:9.01:0,9,93
chr10	16712761	.	T	TATG	39286.98	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-7.121;DP=730;FS=4.741;HRun=0;HaplotypeScore=92.4676;InbreedingCoeff=0.9916;MQ=82.25;MQ0=0;MQRankSum=-10.709;QD=57.61;ReadPosRankSum=4.790;VQSLOD=7.0936;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,47:52:99:2568,114,0	1/1:1,14:15:42.14:968,42,0	0/0:23,0:23:54.18:0,54,909	0/0:25,0:25:69.20:0,69,1125	1/1:5,23:28:69.24:1542,69,0	1/1:0,27:28:78.27:1797,78,0	1/1:4,22:26:60.21:1381,60,0	1/1:7,26:34:90.30:1989,90,0	1/1:3,22:25:63.22:1425,63,0	1/1:7,23:30:87.25:1870,87,0	1/1:1,22:24:69.24:1584,69,0	1/1:6,24:30:72.25:1656,72,0	1/1:2,28:30:78.18:1744,78,0	1/1:2,27:29:72.25:1644,72,0	1/1:3,27:30:81.28:1814,81,0	1/1:1,32:33:90.31:2073,90,0	1/1:4,24:28:72.25:1615,72,0	1/1:2,20:22:51.17:1175,51,0	1/1:5,12:17:45.15:1035,45,0	1/1:3,25:29:81.28:1844,81,0	1/1:2,17:20:45.15:1007,45,0	1/1:3,29:32:84.29:1915,84,0	1/1:0,13:14:39.13:897,39,0	1/1:3,19:23:48.64:1089,49,0	1/1:1,11:14:30.10:691,30,0	1/1:6,22:29:75.26:1684,75,0	1/1:4,29:33:84.29:1934,84,0	1/1:2,5:7:15.05:345,15,0
chr10	16713283	.	TCA	T	9408.78	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=10.676;DP=671;FS=7.643;HRun=0;HaplotypeScore=89.2659;InbreedingCoeff=0.9754;MQ=65.83;MQ0=3;MQRankSum=1.070;QD=21.93;ReadPosRankSum=2.691;VQSLOD=4.8152;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:49.94:0,50,1150	1/1:1,3:4:6.02:72,6,0	0/0:52,0:33:35.68:0,36,502	0/0:33,0:22:11.91:0,12,346	1/1:4,17:22:47.98:556,48,0	0/0:28,0:28:66.17:0,66,987	0/0:20,0:20:33.11:0,33,530	1/1:14,15:31:50.71:515,51,0	1/1:6,7:14:20.90:231,21,0	0/0:27,0:27:72.05:0,72,1066	0/0:20,0:20:48.15:0,48,742	0/0:25,0:25:54.16:0,54,839	1/1:6,19:27:53.34:606,53,0	1/1:4,22:26:54.17:651,54,0	1/1:7,18:25:45.14:540,45,0	1/1:6,11:17:21.06:253,21,0	1/1:5,23:28:63.19:759,63,0	1/1:5,15:19:33.08:398,33,0	1/1:9,13:21:39.04:425,39,0	1/1:4,17:20:36.04:403,36,0	1/1:8,10:18:27.08:320,27,0	1/1:3,18:21:51.11:597,51,0	1/1:1,21:22:38.89:470,39,0	1/1:6,23:29:60.18:723,60,0	1/1:5,11:17:26.87:287,27,0	1/1:6,10:16:33.10:394,33,0	1/1:5,25:31:59.30:700,59,0	1/1:2,16:18:42.13:506,42,0
chr10	16714135	.	GAAC	G	20544.28	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=12.436;DP=644;FS=4.013;HRun=0;HaplotypeScore=105.7218;InbreedingCoeff=0.9935;MQ=74.07;MQ0=0;MQRankSum=-6.152;QD=43.07;ReadPosRankSum=3.372;VQSLOD=6.4426;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:72.23:0,72,1587	1/1:0,6:6:18.06:298,18,0	0/0:20,0:20:51.17:0,51,1098	0/0:17,0:17:48.16:0,48,976	1/1:1,36:37:93.32:1544,93,0	0/0:29,0:28:87.30:0,87,1934	0/0:20,0:20:60.19:0,60,1316	1/1:1,47:48:99:2182,138,0	1/1:0,15:15:42.14:699,42,0	1/1:2,16:18:51.17:839,51,0	1/1:1,25:26:63.22:1048,63,0	0/0:16,0:16:45.15:0,45,1016	1/1:1,19:20:51.17:848,51,0	1/1:2,27:29:75.26:1249,75,0	1/1:1,28:29:81.28:1348,81,0	0/0:21,0:21:63.19:0,63,1323	1/1:0,27:27:66.23:1099,66,0	0/0:20,0:20:57.20:0,57,1286	1/1:5,14:19:38.51:648,39,0	1/1:2,30:32:84.29:1397,84,0	1/1:2,19:21:45.15:750,45,0	1/1:1,18:19:48.16:800,48,0	1/1:0,24:24:66.20:1099,66,0	1/1:1,19:20:42.14:700,42,0	1/1:0,24:24:60.21:999,60,0	1/1:0,30:30:90.31:1499,90,0	1/1:0,28:28:78.27:1298,78,0	1/1:0,5:5:12.04:200,12,0
chr10	16716749	.	GAC	G	12353.65	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=11.528;DP=727;FS=0.000;HRun=0;HaplotypeScore=109.8279;InbreedingCoeff=0.9902;MQ=67.10;MQ0=4;MQRankSum=0.349;QD=22.42;ReadPosRankSum=2.939;VQSLOD=5.2186;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:68.30:0,68,1138	1/1:1,12:14:23.91:269,24,0	0/0:38,1:30:38.16:0,38,488	0/0:27,0:19:27.50:0,28,393	1/1:3,15:18:36.11:437,36,0	0/0:22,0:22:57.19:0,57,915	0/0:27,0:28:12.84:0,13,861	1/1:10,20:30:57.14:654,57,0	1/1:6,19:25:35.41:436,35,0	1/1:7,26:34:81.02:910,81,0	1/1:3,13:16:33.10:400,33,0	0/0:25,0:25:54.18:0,54,837	1/1:3,24:28:63.01:742,63,0	1/1:7,18:28:50.65:552,51,0	1/1:3,27:30:66.20:797,66,0	1/1:5,29:35:65.87:756,66,0	1/1:3,22:25:51.16:619,51,0	1/1:3,13:16:33.06:383,33,0	1/1:5,18:23:54.10:610,54,0	1/1:2,17:19:30.09:364,30,0	1/1:7,32:38:38.93:704,39,0	1/1:2,15:17:24.07:291,24,0	1/1:9,19:27:42.13:510,42,0	1/1:8,28:37:75.06:888,75,0	1/1:6,24:30:51.16:619,51,0	1/1:5,20:26:62.80:707,63,0	1/1:4,20:25:44.97:524,45,0	1/1:2,6:8:15.05:182,15,0
chr10	16717154	.	TGGAC	T	4126.72	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=18.337;DP=666;FS=2.317;HRun=0;HaplotypeScore=150.3653;InbreedingCoeff=0.1499;MQ=65.41;MQ0=0;MQRankSum=-5.051;QD=15.81;ReadPosRankSum=5.812;VQSLOD=3.3339;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,105,2722	0/0:7,0:7:21.03:0,21,479	0/0:22,0:20:53.68:0,54,1255	0/0:20,0:20:46.53:0,47,1243	0/0:31,0:31:87.28:0,87,2327	0/0:26,0:26:78.22:0,78,1778	0/0:21,0:21:63.20:0,63,1641	0/1:32,0:32:79.50:446,0,79	0/1:15,0:15:8.15:289,0,8	0/0:36,0:36:99:0,108,2611	0/0:14,0:14:41.91:0,42,754	0/0:20,0:20:60.19:0,60,1587	0/1:26,0:26:5.34:504,0,5	0/1:29,0:29:64.79:441,0,65	0/0:35,0:35:99:0,105,2781	0/0:34,0:34:99:0,102,2547	0/0:25,0:25:75.23:0,75,1978	0/0:13,0:13:39.12:0,39,999	0/1:25,0:25:99:194,0,156	0/1:21,0:21:57.35:377,0,57	0/1:35,0:35:71.55:421,0,72	0/1:17,0:17:36.32:275,0,36	0/1:18,0:17:28.94:278,0,29	1/1:18,5:23:26.40:433,26,0	1/1:20,0:20:48.14:469,48,0	0/0:22,0:22:40.21:0,40,1427	0/0:31,0:31:93.28:0,93,2375	0/0:13,0:13:39.01:0,39,917
chr10	16717161	.	AC	A	2960.06	PASS	AB=0.628;AC=16;AF=0.286;AN=56;BaseQRankSum=18.271;DP=655;FS=5.528;HRun=1;HaplotypeScore=115.7700;InbreedingCoeff=0.5174;MQ=64.60;MQ0=0;MQRankSum=-5.552;QD=11.38;ReadPosRankSum=4.978;VQSLOD=2.1950;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,108,1695	0/0:5,0:5:15.05:0,15,240	0/0:22,0:20:60.19:0,60,912	0/0:23,0:23:59.05:0,59,854	0/0:34,0:34:99:0,99,1531	0/0:24,0:24:72.22:0,72,1125	0/0:25,0:25:72.72:0,73,1148	0/1:18,16:34:49.54:294,0,50	0/1:5,10:15:12.82:184,0,13	0/0:31,0:31:93.26:0,93,1452	0/0:7,0:7:21.07:0,21,336	0/0:22,0:22:66.20:0,66,1006	0/1:7,18:25:3.88:317,0,4	1/1:10,18:28:55.67:531,56,0	0/0:35,0:35:99:0,105,1629	0/0:30,0:30:86.63:0,87,1390	0/0:25,0:25:75.23:0,75,1169	0/0:15,0:15:45.15:0,45,705	0/1:12,9:21:28.34:140,0,28	1/1:3,15:18:30.66:311,31,0	0/1:14,21:35:9:346,0,9	1/1:6,11:17:28.72:218,29,0	0/1:6,15:20:32.04:206,0,32	1/1:9,15:24:20.56:294,21,0	1/1:6,16:22:18.22:307,18,0	0/0:18,0:18:54.18:0,54,842	0/0:31,0:31:93.32:0,93,1476	0/0:11,0:11:33.11:0,33,527
chr10	16717163	.	AGAT	A	5906.45	PASS	AB=0.615;AC=21;AF=0.375;AN=56;BaseQRankSum=19.564;DP=664;FS=3.482;HRun=0;HaplotypeScore=133.8602;InbreedingCoeff=0.9084;MQ=65.92;MQ0=0;MQRankSum=-3.474;QD=22.63;ReadPosRankSum=2.601;VQSLOD=4.7515;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,108,2606	0/0:5,0:5:15.05:0,15,370	0/0:23,0:21:63.21:0,63,1455	0/0:24,0:24:59.72:0,60,1425	0/0:34,0:34:99:0,99,2357	0/0:25,0:25:72.21:0,72,1586	0/0:25,0:25:72.68:0,73,1678	1/1:17,16:33:11.24:601,11,0	0/1:6,10:16:4.76:352,0,5	0/0:32,0:32:96.33:0,96,2312	0/0:7,0:7:21.07:0,21,518	0/0:23,0:23:66.23:0,66,1569	1/1:8,18:26:27.87:634,28,0	1/1:9,18:27:59.60:804,60,0	0/0:34,0:34:99:0,102,2409	0/0:29,0:29:87.30:0,87,2057	0/0:25,0:25:72.25:0,72,1735	0/0:17,0:17:48.16:0,48,1126	1/1:10,9:19:33:364,33,0	1/1:4,15:19:11.49:502,11,0	1/1:14,21:35:50.51:706,51,0	1/1:6,11:17:34.67:417,35,0	1/1:6,15:20:4.29:387,4,0	1/1:10,15:25:27.97:541,28,0	1/1:7,16:23:38.69:597,39,0	0/0:19,0:19:57.20:0,57,1357	0/0:33,0:33:99:0,99,2314	0/0:11,0:11:33.11:0,33,813
chr10	16717808	.	TTCC	T	3705.42	PASS	AB=1.000;AC=51;AF=0.911;AN=56;BaseQRankSum=-3.977;DP=258;FS=0.000;HRun=0;HaplotypeScore=43.1000;InbreedingCoeff=0.6370;MQ=73.19;MQ0=5;MQRankSum=-3.730;QD=17.00;ReadPosRankSum=3.636;VQSLOD=2.7260;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:11:6.33:117,6,0	1/1:2,0:2:2.90:16,3,0	0/0:22,0:20:40.26:0,40,462	0/0:18,0:15:31.15:0,31,327	1/1:8,0:8:20.94:167,21,0	1/1:4,0:4:9.36:65,9,0	1/1:10,0:10:29.89:238,30,0	1/1:14,0:14:32.72:269,33,0	1/1:10,0:10:26.85:206,27,0	1/1:7,0:6:14.68:107,15,0	1/1:4,0:4:5.95:44,6,0	1/1:14,0:14:32.86:267,33,0	0/1:8,0:8:0:0,0,0	1/1:9,0:9:20.59:151,21,0	1/1:2,9:10:5.99:49,6,0	1/1:6,0:5:14.98:123,15,0	1/1:12,0:11:32.68:232,33,0	1/1:5,0:5:11.95:93,12,0	1/1:5,0:5:12.90:112,13,0	1/1:7,0:7:20.78:151,21,0	1/1:24,0:23:59.45:449,59,0	1/1:7,0:7:8.99:76,9,0	1/1:5,0:5:14.96:120,15,0	1/1:15,0:15:32.93:266,33,0	1/1:4,0:4:8.95:69,9,0	1/1:5,0:5:14.72:109,15,0	1/1:10,0:10:26.17:192,26,0	1/1:1,0:1:2.97:20,3,0
chr10	16717809	.	TCCTCCACCACCACCA	T	3523.88	PASS	AB=1.000;AC=47;AF=0.839;AN=56;BaseQRankSum=-4.987;DP=259;FS=1.495;HRun=0;HaplotypeScore=99.6551;InbreedingCoeff=0.2236;MQ=70.80;MQ0=5;MQRankSum=-2.866;QD=16.02;ReadPosRankSum=2.659;VQSLOD=1.6554;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:12,0:12:88.05:88,0,99	1/1:2,0:2:2.90:16,3,0	0/0:21,0:19:40.27:0,40,462	0/0:18,0:15:31.15:0,31,327	0/1:8,0:8:10.55:121,0,11	0/1:4,0:4:31.12:31,0,39	1/1:10,0:10:29.89:238,30,0	1/1:16,0:16:32.72:270,33,0	1/1:10,0:10:26.85:206,27,0	1/1:8,0:7:14.68:107,15,0	1/1:2,0:2:5.95:44,6,0	0/1:14,0:14:99:207,0,221	1/1:0,7:7:2.97:20,3,0	1/1:8,0:8:20.59:151,21,0	1/1:11,0:10:5.99:49,6,0	1/1:6,0:5:14.98:123,15,0	0/1:12,0:11:18.47:180,0,18	1/1:5,0:5:11.95:93,12,0	1/1:7,0:7:12.90:112,13,0	1/1:7,0:7:20.78:151,21,0	1/1:26,0:24:59.45:449,59,0	1/1:7,0:7:8.99:76,9,0	1/1:5,0:5:14.96:120,15,0	1/1:13,0:13:32.95:286,33,0	1/1:4,0:4:8.95:69,9,0	1/1:5,0:5:14.72:109,15,0	1/1:10,0:10:25.89:191,26,0	1/1:1,0:1:2.97:20,3,0
chr10	16718301	.	C	CT	2382.15	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=-11.627;DP=426;FS=4.485;HRun=3;HaplotypeScore=62.7195;InbreedingCoeff=0.7913;MQ=56.49;MQ0=15;MQRankSum=1.775;QD=17.78;ReadPosRankSum=1.555;VQSLOD=3.2867;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,41:46:84.19:1125,84,0	0/0:8,0:8:23.97:0,24,197	0/0:5,0:6:8.77:0,9,60	0/0:6,0:3:7.81:0,8,62	0/0:22,0:21:44.91:0,45,363	1/1:0,18:18:39.13:542,39,0	1/1:0,8:8:21.07:286,21,0	0/0:22,0:7:17.93:0,18,141	0/0:8,0:7:14.95:0,15,118	0/0:14,0:14:38.94:0,39,321	0/0:14,0:14:38.74:0,39,296	1/1:1,20:20:36.12:500,36,0	0/0:14,0:12:26.83:0,27,200	0/0:4,0:4:8.98:0,9,73	0/0:15,0:15:26.97:0,27,221	1/1:14,0:14:15.87:46,16,0	0/0:22,0:21:44.92:0,45,366	0/1:25,0:24:17.38:58,0,17	0/0:23,0:13:35.70:0,36,274	0/0:14,0:12:26.78:0,27,218	0/0:6,0:4:11.96:0,12,94	0/0:2,0:1:2.99:0,3,24	0/0:9,0:9:20.95:0,21,168	0/0:6,0:4:8.97:0,9,72	0/0:19,0:17:38.91:0,39,315	0/0:22,0:21:50.94:0,51,422	0/0:14,0:11:29.06:0,29,225	0/0:21,0:20:38.89:0,39,309
chr10	16718304	.	TA	T	2671.07	PASS	AB=1.000;AC=41;AF=0.732;AN=56;BaseQRankSum=-4.585;DP=427;FS=5.772;HRun=12;HaplotypeScore=61.2301;InbreedingCoeff=0.8513;MQ=58.31;MQ0=11;MQRankSum=0.117;QD=9.44;ReadPosRankSum=0.756;VQSLOD=2.6396;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:45:89.53:0,90,575	1/1:0,7:8:22.96:168,23,0	0/0:8,0:7:13.73:0,14,126	0/1:7,0:3:0.66:1,0,25	1/1:6,16:21:47.72:360,48,0	0/0:18,0:18:38.21:0,38,236	0/0:8,0:8:18.50:0,19,110	1/1:6,0:7:12.56:38,13,0	1/1:1,0:7:8.03:23,8,0	1/1:1,12:14:37.89:282,38,0	1/1:1,13:14:35.85:277,36,0	0/0:22,0:21:38.28:0,38,242	1/1:4,0:12:12.21:35,12,0	1/1:0,0:4:6.11:18,6,0	1/1:4,10:15:25.95:192,26,0	0/0:2,0:15:29.15:0,29,180	1/1:2,19:20:44.83:348,45,0	0/0:4,0:25:63.05:0,63,341	1/1:7,0:14:19.21:55,19,0	1/1:1,0:12:23.76:76,24,0	1/1:1,0:5:8.15:24,8,0	1/1:0,0:2:2.03:6,2,0	1/1:1,0:9:14.26:41,14,0	1/1:1,0:4:6.11:18,6,0	1/1:1,0:16:26.48:77,26,0	1/1:3,18:20:47.77:366,48,0	1/1:3,12:13:26.89:209,27,0	1/1:2,18:20:32.86:255,33,0
chr10	16720281	.	CCACA	C	4604.43	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-3.913;DP=467;FS=0.000;HRun=0;HaplotypeScore=69.4409;InbreedingCoeff=0.7830;MQ=43.79;MQ0=39;MQRankSum=0.456;QD=16.62;ReadPosRankSum=0.460;VQSLOD=4.1042;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:15:2.68:0,3,11	1/1:5,0:5:8.96:103,9,0	0/0:40,0:10:29.88:0,30,558	0/0:53,0:9:24.08:0,24,496	1/1:5,8:13:21.07:345,21,0	0/0:10,0:11:15.38:0,15,76	0/0:10,0:9:13.59:0,14,60	1/1:14,13:22:30.07:442,30,0	1/1:8,2:7:18.06:302,18,0	1/1:15,5:16:15.05:251,15,0	1/1:10,9:17:22.23:297,22,0	0/0:13,0:12:8.29:0,8,37	1/1:7,4:11:21:314,21,0	1/1:9,3:10:9.03:151,9,0	1/1:13,0:13:6.02:87,6,0	0/0:6,0:18:8.10:0,8,35	1/1:6,7:8:3.01:39,3,0	0/0:7,0:17:8.13:0,8,36	1/1:6,8:12:24.04:350,24,0	1/1:5,9:14:24.08:400,24,0	0/0:4,3:5:0.47:0,0,1	1/1:6,4:7:15.05:248,15,0	1/1:8,9:14:8.70:115,9,0	1/1:8,11:18:6.02:82,6,0	1/1:11,2:12:11.96:169,12,0	1/1:9,10:16:27.08:426,27,0	1/1:19,4:20:13.25:446,13,0	1/1:3,1:3:5.91:38,6,0
chr10	16720284	.	CA	C	1272.28	PASS	AB=0.923;AC=30;AF=0.536;AN=56;BaseQRankSum=1.522;DP=454;FS=0.783;HRun=1;HaplotypeScore=69.0642;InbreedingCoeff=0.2698;MQ=46.89;MQ0=38;MQRankSum=2.463;QD=4.84;ReadPosRankSum=1.386;VQSLOD=0.3918;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:16:1.24:0,1,3	1/1:1,3:4:8.51:45,9,0	0/0:42,0:13:32.97:0,33,465	0/0:54,0:10:27.07:0,27,389	1/1:11,1:12:20.15:120,20,0	0/0:15,0:13:16.29:0,16,76	0/0:12,0:10:9.24:0,9,44	0/1:25,0:21:99:135,0,148	1/1:10,0:7:16.63:82,17,0	0/1:16,1:13:61.77:62,0,79	0/1:16,1:14:20.34:66,0,20	0/0:12,0:11:6.73:0,7,33	1/1:9,0:10:8.72:98,9,0	1/1:7,6:11:8.67:49,9,0	1/1:2,10:12:5.98:61,6,0	0/0:14,0:14:3.74:0,4,8	1/1:12,0:8:2.68:11,3,0	0/0:16,0:16:9.75:0,10,70	1/1:12,0:10:7.96:86,8,0	1/1:14,0:14:22.83:118,23,0	0/0:7,0:5:0:0,0,0	1/1:8,1:6:14.57:98,15,0	0/1:17,0:14:9.78:34,0,10	1/1:18,0:17:1.58:10,2,0	0/1:6,7:12:0.64:29,0,1	0/1:19,0:16:56.77:113,0,57	0/1:20,1:18:23.45:127,0,23	0/1:7,1:7:5.66:101,0,6
chr10	16720555	.	CT	C	4553.02	PASS	AB=0.789;AC=45;AF=0.804;AN=56;BaseQRankSum=3.084;DP=497;FS=2.792;HRun=13;HaplotypeScore=58.1382;InbreedingCoeff=0.2194;MQ=66.77;MQ0=7;MQRankSum=-0.216;QD=10.03;ReadPosRankSum=2.897;VQSLOD=4.3052;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:31:47.85:0,48,437	1/1:1,3:4:5.96:44,6,0	0/1:23,1:12:15.38:15,0,27	0/1:11,0:7:0.90:7,0,1	1/1:2,11:13:20.78:153,21,0	0/1:14,1:15:10.61:11,0,144	0/0:12,0:12:2.40:0,2,183	1/1:5,23:29:64.56:460,65,0	1/1:5,13:17:20.80:150,21,0	1/1:6,17:24:49.73:355,50,0	1/1:0,8:8:17.85:128,18,0	0/1:18,2:20:6.90:7,0,244	1/1:3,12:15:8.67:195,9,0	1/1:4,13:17:17.84:131,18,0	1/1:8,13:21:26.78:197,27,0	1/1:5,10:14:14.89:109,15,0	1/1:6,24:28:53.65:394,54,0	1/1:4,15:18:32.79:241,33,0	1/1:6,16:24:50.79:340,51,0	1/1:3,10:13:23.76:171,24,0	1/1:1,14:15:29.83:219,30,0	1/1:1,5:6:11.89:88,12,0	0/1:5,11:16:14.46:73,0,14	1/1:1,24:25:47.69:350,48,0	0/1:5,7:13:38.43:73,0,38	1/1:8,14:22:31.23:253,31,0	0/1:2,12:14:6:114,0,6	1/1:3,17:20:15.59:277,16,0
chr10	16723320	.	CG	C	2283.37	PASS	AC=40;AF=0.909;AN=44;BaseQRankSum=-2.941;DP=142;FS=13.576;HRun=7;HaplotypeScore=40.7424;InbreedingCoeff=0.3711;MQ=62.01;MQ0=0;MQRankSum=-2.941;QD=17.70;ReadPosRankSum=0.845;VQSLOD=1.9253;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,5:7:15.03:150,15,0	./.	0/0:5,0:4:3.01:0,3,36	0/0:5,0:3:3.43:0,3,20	./.	1/1:1,2:3:3.01:31,3,0	1/1:2,16:18:33:321,33,0	1/1:1,5:6:12.02:120,12,0	1/1:2,1:3:6.01:61,6,0	1/1:0,8:8:21.04:213,21,0	./.	1/1:3,5:8:14.98:140,15,0	1/1:1,1:2:3:30,3,0	1/1:1,3:4:9.02:91,9,0	1/1:2,1:3:3:30,3,0	1/1:0,3:3:9.02:91,9,0	1/1:3,8:11:15.02:152,15,0	1/1:1,10:11:24.01:233,24,0	1/1:1,4:5:12.02:118,12,0	./.	1/1:7,14:21:29.97:280,30,0	./.	1/1:0,1:1:2.97:20,3,0	1/1:0,5:5:9.02:92,9,0	1/1:0,1:1:3.01:30,3,0	1/1:2,4:6:11.97:102,12,0	1/1:0,3:3:8.98:80,9,0	./.
chr10	16723335	.	G	GC	2314.97	PASS	AC=34;AF=0.944;AN=36;BaseQRankSum=-2.251;DP=100;FS=5.246;HRun=3;HaplotypeScore=32.9756;InbreedingCoeff=0.2770;MQ=47.34;MQ0=0;MQRankSum=-2.410;QD=25.72;ReadPosRankSum=1.056;VQSLOD=2.6532;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,5:6:15.01:188,15,0	./.	0/0:2,0:2:6.01:0,6,61	./.	./.	./.	1/1:2,10:12:27.05:355,27,0	1/1:1,3:4:9.03:126,9,0	1/1:0,1:1:3.01:42,3,0	1/1:3,5:8:21.06:271,21,0	./.	1/1:0,8:8:18.06:251,18,0	1/1:0,1:1:3.01:42,3,0	1/1:0,3:3:9.03:126,9,0	1/1:1,1:2:3.01:42,3,0	1/1:1,3:4:9.03:126,9,0	1/1:2,7:9:18.06:252,18,0	1/1:3,7:9:12.04:168,12,0	1/1:1,1:2:3.01:42,3,0	./.	1/1:2,10:12:14.97:166,15,0	./.	./.	./.	1/1:0,2:2:3.48:43,3,0	1/1:0,3:3:9.03:126,9,0	1/1:0,3:3:3.01:42,3,0	./.
chr10	16727409	.	TGGTG	T	21040.22	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=16.633;DP=703;FS=9.877;HRun=0;HaplotypeScore=153.2249;InbreedingCoeff=0.9996;MQ=77.13;MQ0=0;MQRankSum=-7.843;QD=44.30;ReadPosRankSum=3.337;VQSLOD=5.0231;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,117,3024	1/1:2,12:14:27.09:504,27,0	0/0:21,0:21:60.21:0,60,1573	0/0:29,0:28:63.06:0,63,1457	1/1:2,19:21:45.15:837,45,0	0/0:21,0:21:60.21:0,60,1566	0/0:29,0:29:84.27:0,84,2120	1/1:4,32:36:96.31:1750,96,0	1/1:1,24:25:60.21:1119,60,0	1/1:3,22:25:69.20:1250,69,0	1/1:4,18:22:51.17:928,51,0	0/0:38,0:38:99:0,114,2998	1/1:5,20:25:54.18:1007,54,0	1/1:1,26:27:72.25:1343,72,0	1/1:3,34:37:84.29:1567,84,0	0/0:35,0:35:57.21:0,57,2672	1/1:2,22:24:60.21:1120,60,0	0/0:13,0:13:36.08:0,36,898	1/1:3,22:25:69.23:1260,69,0	1/1:1,17:18:42.14:780,42,0	1/1:3,22:25:48.16:877,48,0	1/1:0,15:15:33.11:616,33,0	1/1:3,13:16:33.58:616,34,0	1/1:0,22:22:44.99:839,45,0	1/1:2,24:26:57.19:1045,57,0	1/1:0,24:24:69.24:1287,69,0	1/1:1,37:38:93.32:1735,93,0	1/1:0,10:10:30.10:560,30,0
chr10	16728233	.	C	CT	930.25	PASS	AB=0.895;AC=12;AF=0.214;AN=56;BaseQRankSum=-0.828;DP=652;FS=32.103;HRun=14;HaplotypeScore=83.5816;InbreedingCoeff=0.2744;MQ=66.72;MQ0=7;MQRankSum=-1.235;QD=4.23;ReadPosRankSum=-0.276;VQSLOD=-0.5068;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:10,38:48:30.02:490,30,0	0/1:6,0:6:14.62:15,0,46	0/1:11,0:9:3.38:3,0,26	0/0:13,0:11:8.53:0,9,50	0/0:22,0:23:51.50:0,51,315	1/1:11,8:20:0.77:241,1,0	1/1:9,12:22:4.96:185,5,0	0/0:34,0:36:7.39:0,7,148	0/0:22,0:23:34.60:0,35,197	0/0:24,1:23:0.83:0,1,139	0/1:19,3:22:34.87:35,0,198	0/1:11,18:28:1.83:90,0,2	0/0:16,0:16:9.56:0,10,58	0/0:11,0:10:12.01:0,12,66	0/0:28,1:31:21.46:0,21,306	0/0:38,0:37:12.02:0,12,323	0/0:24,0:26:41.26:0,41,280	0/0:22,0:21:42.17:0,42,259	0/1:26,1:27:11.86:12,0,190	0/0:26,1:28:15.26:0,15,249	0/0:13,0:13:12.10:0,12,69	0/0:21,1:22:4.66:0,5,147	0/0:18,4:22:11.26:0,11,181	0/0:24,5:29:16.33:0,16,220	0/0:15,1:16:36.66:0,37,231	0/1:26,3:30:4.12:4,0,211	0/0:23,0:23:47.99:0,48,297	0/0:13,0:13:22.66:0,23,131
chr10	16728709	.	T	TA	8752.21	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-18.355;DP=980;FS=0.594;HRun=1;HaplotypeScore=92.7393;InbreedingCoeff=0.9983;MQ=79.76;MQ0=1;MQRankSum=-6.476;QD=42.49;ReadPosRankSum=2.528;VQSLOD=4.8878;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,61:62:99:2640,178,0	0/0:9,0:9:24.05:0,24,294	0/0:17,0:17:48.08:0,48,572	0/0:31,0:31:87.08:0,87,1020	0/0:24,0:24:71.97:0,72,907	1/1:0,41:40:99:1663,111,0	1/1:2,34:36:99:1483,99,0	0/0:40,0:40:99:0,111,1405	0/0:40,0:39:99:0,117,1517	0/0:28,0:28:81.25:0,81,1039	0/0:15,0:15:45.12:0,45,551	1/1:0,67:67:99:2966,199,0	0/0:38,0:38:99:0,111,1410	0/0:43,0:43:99:0,126,1533	0/0:60,0:60:99:0,178,2296	0/0:61,0:61:99:0,181,2279	0/0:38,0:38:99:0,114,1462	0/0:20,0:20:57.14:0,57,707	0/0:19,0:19:54.17:0,54,690	0/0:28,0:28:81.26:0,81,1049	0/0:63,0:63:99:0,187,2381	0/0:36,0:36:99:0,105,1339	0/0:27,0:27:81.25:0,81,1031	0/0:40,0:39:99:0,114,1434	0/0:23,0:23:66.21:0,66,857	0/0:38,0:38:99:0,111,1390	0/0:29,0:27:84.24:0,84,1060	0/0:7,0:7:21.07:0,21,273
chr10	16729437	.	A	AAAAACAAAAC	28628.16	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-2.914;DP=513;FS=23.633;HRun=0;HaplotypeScore=171.8098;InbreedingCoeff=0.8746;MQ=66.20;MQ0=2;MQRankSum=-3.950;QD=63.48;ReadPosRankSum=2.528;VQSLOD=2.7246;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,9:24:54.96:2072,55,0	1/1:7,1:8:18.06:623,18,0	0/0:32,0:23:24.62:0,25,361	0/0:29,0:20:17.52:0,18,174	1/1:16,3:20:48.03:1505,48,0	1/1:5,6:12:9.03:453,9,0	1/1:5,8:13:12.04:466,12,0	1/1:31,0:29:63.19:1709,63,0	1/1:13,1:14:39.13:1215,39,0	1/1:8,1:9:19.88:759,20,0	1/1:12,0:12:21.07:785,21,0	1/1:10,18:28:26.61:1089,27,0	1/1:27,3:30:48.05:1977,48,0	1/1:15,3:18:36.09:1238,36,0	1/1:16,4:20:33.11:1281,33,0	1/1:16,4:20:38.10:971,38,0	1/1:15,3:18:36.10:1194,36,0	1/1:23,2:24:40.98:1495,41,0	1/1:11,3:14:13.09:691,13,0	1/1:11,4:14:30.09:1142,30,0	1/1:15,0:15:15.05:421,15,0	1/1:13,5:18:42.12:1551,42,0	1/1:10,1:11:26.27:918,26,0	1/1:14,0:13:24.02:638,24,0	1/1:16,3:19:39.12:1653,39,0	1/1:23,2:25:47.87:1570,48,0	1/1:15,1:16:23.97:911,24,0	1/1:2,0:2:6.02:302,6,0
chr10	16729447	.	CAAA	C	2844.77	PASS	AB=0.933;AC=23;AF=0.411;AN=56;BaseQRankSum=-4.408;DP=474;FS=21.951;HRun=7;HaplotypeScore=176.1322;InbreedingCoeff=-0.5596;MQ=62.07;MQ0=3;MQRankSum=1.283;QD=7.67;ReadPosRankSum=2.913;VQSLOD=-0.5033;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:22,1:24:99:176,0,381	0/1:8,0:8:37.66:38,0,307	0/0:31,0:20:28.50:0,29,380	0/0:25,0:14:18.42:0,18,191	0/1:16,4:20:99:235,0,231	0/0:12,0:12:14.88:0,15,147	0/0:11,0:11:18.02:0,18,281	0/1:29,5:31:99:357,0,415	0/1:10,3:13:69.50:288,0,69	1/1:7,1:7:20.11:152,20,0	0/1:11,1:12:93.02:130,0,93	0/0:21,0:21:35.87:0,36,534	0/1:24,0:24:99:107,0,537	0/1:13,2:15:99:167,0,196	0/1:18,1:19:49.86:50,0,385	0/1:15,2:17:99:140,0,254	0/1:17,0:17:99:135,0,256	0/1:24,0:23:73.99:74,0,744	0/1:14,0:14:72.86:73,0,257	0/1:14,0:13:53.89:54,0,385	0/1:13,1:14:48.82:49,0,151	0/1:15,1:16:99:133,0,272	0/1:6,3:9:71.07:199,0,71	0/1:15,0:14:93.82:94,0,156	0/1:18,1:19:98.83:99,0,428	0/1:17,1:18:89.21:219,0,89	0/1:16,1:17:42.19:42,0,432	0/0:3,0:3:9.03:0,9,180
chr10	16729450	.	A	AAC	7839.03	PASS	AB=0.789;AC=26;AF=0.464;AN=56;BaseQRankSum=1.058;DP=469;FS=18.913;HRun=0;HaplotypeScore=157.8158;InbreedingCoeff=-0.6872;MQ=60.57;MQ0=3;MQRankSum=-1.330;QD=18.98;ReadPosRankSum=8.825;VQSLOD=3.1174;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:21,4:25:82.37:540,0,82	0/1:8,1:9:93.07:93,0,226	0/0:30,0:19:29.21:0,29,324	0/0:23,0:12:17.80:0,18,191	0/1:12,7:19:57.56:495,0,58	0/1:10,0:10:33.73:66,0,34	0/1:11,0:11:9.99:10,0,191	0/1:22,12:31:99:699,0,285	0/1:7,7:14:6.63:544,0,7	1/1:5,3:7:21.03:300,21,0	0/1:5,6:11:72:344,0,72	0/1:22,0:22:99:115,0,250	0/1:12,12:24:99:445,0,266	0/1:9,4:13:50.54:387,0,51	0/1:10,8:18:99:321,0,168	0/1:17,1:18:87.42:336,0,87	0/1:13,4:17:99:330,0,117	0/1:20,5:24:99:229,0,493	0/1:10,4:14:99:185,0,143	0/1:12,3:14:99:247,0,196	0/1:5,8:13:99:129,0,109	0/1:12,4:16:44.42:443,0,44	0/1:6,3:9:3.43:333,0,3	0/1:10,4:13:99:163,0,134	0/1:13,5:18:99:365,0,254	0/1:8,11:19:61.32:586,0,61	0/1:10,7:17:99:136,0,310	0/0:3,0:3:9.03:0,9,137
chr10	16729477	.	A	AC	7718.11	PASS	AB=0.557;AC=37;AF=0.661;AN=56;BaseQRankSum=1.572;DP=377;FS=92.365;HRun=0;HaplotypeScore=127.7352;InbreedingCoeff=0.6744;MQ=48.42;MQ0=6;MQRankSum=-4.764;QD=32.16;ReadPosRankSum=1.677;VQSLOD=-0.3655;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,1:23:0.59:0,1,554	1/1:1,7:8:24:351,24,0	0/0:12,0:8:21.53:0,22,169	0/0:15,0:7:12.61:0,13,104	1/1:3,6:11:27.67:347,28,0	0/0:11,0:11:24.06:0,24,305	0/0:10,0:10:24.04:0,24,299	1/1:5,16:19:35.73:565,36,0	1/1:4,4:8:16.19:202,16,0	1/1:3,1:4:6.08:59,6,0	1/1:5,4:9:21.46:225,21,0	0/0:23,0:23:56.54:0,57,785	1/1:5,13:18:46.77:618,47,0	1/1:2,8:9:25.76:354,26,0	1/1:5,11:16:39.28:530,39,0	0/0:20,0:19:30.40:0,30,383	0/1:3,12:16:77.07:537,0,77	0/0:22,0:22:51.13:0,51,657	1/1:3,8:10:3.88:384,4,0	1/1:6,10:15:40.86:557,41,0	0/1:2,6:9:21.12:254,0,21	1/1:4,8:11:32.65:392,33,0	1/1:3,4:7:15.56:192,16,0	0/1:2,8:8:20.57:264,0,21	1/1:7,13:20:54.93:702,55,0	1/1:7,8:15:37.25:453,37,0	1/1:1,10:11:30.05:456,30,0	1/1:3,4:6:18.06:274,18,0
chr10	16729480	.	C	CAA	3015.21	PASS	AB=1.000;AC=43;AF=0.768;AN=56;BaseQRankSum=3.269;DP=392;FS=14.625;HRun=11;HaplotypeScore=152.5048;InbreedingCoeff=0.7296;MQ=50.99;MQ0=6;MQRankSum=-6.444;QD=10.15;ReadPosRankSum=2.048;VQSLOD=0.4733;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:26.84:0,27,301	1/1:8,0:8:3.26:43,3,0	0/0:12,0:10:12.18:0,12,99	0/0:14,0:6:3.31:0,3,77	1/1:12,0:13:22.51:198,23,0	0/0:13,0:13:22.91:0,23,190	0/0:7,0:8:8.86:0,9,137	1/1:20,0:20:27.79:167,28,0	1/1:8,0:8:6.28:61,6,0	1/1:4,0:4:1.25:3,1,0	1/1:8,0:9:14.99:163,15,0	0/0:22,0:23:17.67:0,18,400	1/1:18,0:18:35.23:224,35,0	1/1:12,0:11:14.46:102,14,0	1/1:18,0:18:13.12:117,13,0	1/1:8,13:21:17.28:194,17,0	1/1:16,0:16:1.95:113,2,0	1/1:4,19:23:41.63:573,42,0	1/1:10,0:9:13.98:82,14,0	1/1:17,0:16:32.42:237,32,0	0/1:9,0:9:2.15:49,0,2	1/1:13,0:12:18.88:156,19,0	1/1:8,0:8:14.49:114,14,0	1/1:11,0:9:7.84:71,8,0	1/1:21,0:21:27.76:232,28,0	1/1:15,0:15:12.20:118,12,0	1/1:12,0:11:19.58:131,20,0	1/1:6,0:6:11.34:42,11,0
chr10	16729482	.	A	AC	5981.11	PASS	AB=0.571;AC=38;AF=0.679;AN=56;BaseQRankSum=1.655;DP=404;FS=63.566;HRun=0;HaplotypeScore=137.5834;InbreedingCoeff=0.8107;MQ=53.53;MQ0=6;MQRankSum=-4.269;QD=23.00;ReadPosRankSum=3.279;VQSLOD=0.9404;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:49.87:0,50,533	1/1:0,7:7:21.07:278,21,0	0/0:14,0:10:25.07:0,25,213	0/0:15,0:7:17.07:0,17,156	1/1:10,4:14:14.29:185,14,0	0/0:13,0:13:33.03:0,33,366	0/0:10,0:10:19.40:0,19,243	1/1:14,8:21:32.17:352,32,0	1/1:3,5:8:12.18:173,12,0	1/1:6,0:6:2.43:29,2,0	1/1:5,4:9:11.39:151,11,0	0/0:23,0:23:47.72:0,48,688	1/1:6,13:19:42.20:503,42,0	1/1:2,10:11:25.02:322,25,0	1/1:7,11:18:45.91:517,46,0	0/0:22,0:21:28.21:0,28,203	0/1:4,12:16:3.99:430,0,4	0/0:24,0:23:35.46:0,35,221	1/1:6,5:10:20.05:234,20,0	1/1:11,7:18:7.45:352,7,0	0/1:2,6:8:2.23:182,0,2	1/1:7,6:12:29:264,29,0	1/1:6,3:9:20.99:199,21,0	1/1:1,10:9:5.24:263,5,0	1/1:6,16:22:45.31:577,45,0	1/1:12,6:18:36.17:375,36,0	1/1:2,10:11:30.48:371,30,0	1/1:4,3:6:18.06:226,18,0
chr10	16729603	.	CG	C	1933.98	PASS	AC=12;AF=0.333;AN=36;BaseQRankSum=-5.092;DP=149;FS=2.811;HRun=7;HaplotypeScore=28.3193;InbreedingCoeff=0.6002;MQ=117.41;MQ0=0;MQRankSum=-4.620;QD=23.30;ReadPosRankSum=6.734;VQSLOD=2.1872;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,11:12:30.07:306,30,0	0/0:1,0:1:2.97:0,3,20	0/0:12,1:13:2.23:0,2,278	0/0:15,0:15:29.34:0,29,416	./.	1/1:0,15:15:41.85:428,42,0	1/1:2,11:13:33.02:324,33,0	0/0:6,0:6:5.91:0,6,38	0/0:1,0:1:2.98:0,3,22	0/0:2,0:2:3:0,3,28	./.	1/1:3,11:14:33.07:335,33,0	0/0:4,0:4:0:0,0,0	./.	./.	1/1:2,12:14:36.08:367,36,0	0/0:2,0:2:2.98:0,3,21	1/1:3,12:15:30.06:305,30,0	./.	./.	0/0:4,0:4:3:0,3,25	0/0:2,0:2:2.94:0,3,18	0/0:1,0:1:0:0,0,0	./.	0/0:4,0:4:2.37:0,2,9	./.	./.	./.
chr10	16731039	.	GTCTC	G	5195.25	PASS	AC=36;AF=0.692;AN=52;BaseQRankSum=6.815;DP=619;FS=19.354;HRun=0;HaplotypeScore=210.9061;InbreedingCoeff=0.8240;MQ=72.65;MQ0=18;MQRankSum=-6.808;QD=17.55;ReadPosRankSum=3.417;VQSLOD=3.2922;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:27:45.14:0,45,1100	1/1:6,9:15:21.05:276,21,0	0/0:61,0:33:45.68:0,46,784	0/0:71,0:41:39.45:0,39,659	1/1:7,6:13:6.02:94,6,0	0/0:29,0:28:57.14:0,57,1285	0/0:25,0:20:33.10:0,33,803	1/1:14,11:23:48.15:779,48,0	1/1:8,7:15:3.01:51,3,0	1/1:9,19:28:69.17:944,69,0	1/1:5,8:12:6.01:74,6,0	0/0:36,0:36:75.13:0,75,1848	1/1:5,9:15:15.05:240,15,0	1/1:7,9:16:3.01:58,3,0	1/1:10,14:23:12.98:201,13,0	0/0:26,0:26:51.09:0,51,1235	1/1:12,1:11:8.58:120,9,0	0/0:22,0:21:53.89:0,54,1233	1/1:9,3:11:26.55:425,27,0	1/1:10,1:12:4.23:99,4,0	./.	1/1:12,0:11:17.41:255,17,0	./.	1/1:8,4:11:5.98:71,6,0	1/1:11,6:17:0.47:1,0,0	1/1:7,9:16:41.97:541,42,0	1/1:6,19:25:48.13:632,48,0	1/1:5,8:13:26.99:332,27,0
chr10	16731045	.	C	CTG	2608.31	PASS	AC=36;AF=0.692;AN=52;BaseQRankSum=7.424;DP=610;FS=11.226;HRun=0;HaplotypeScore=206.9246;InbreedingCoeff=0.8071;MQ=70.28;MQ0=23;MQRankSum=-5.877;QD=9.45;ReadPosRankSum=2.272;VQSLOD=2.3459;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:26:45.14:0,45,664	1/1:15,0:15:12.39:94,12,0	0/0:71,0:32:45.48:0,45,614	0/0:80,0:40:36.72:0,37,543	1/1:11,0:11:6:72,6,0	0/0:29,0:28:56.77:0,57,785	0/0:26,0:20:36.06:0,36,502	1/1:20,1:19:46.31:360,46,0	1/1:8,6:14:3.01:51,3,0	1/1:26,0:26:57.58:302,58,0	1/1:12,0:11:6.01:66,6,0	0/0:35,0:35:75.22:0,75,1097	1/1:11,3:14:15.05:233,15,0	1/1:9,7:16:3.01:55,3,0	1/1:24,0:23:16.73:160,17,0	0/0:25,0:25:51.16:0,51,756	1/1:12,0:10:11.51:108,12,0	0/0:22,0:21:56.85:0,57,768	1/1:6,5:10:30.01:429,30,0	1/1:2,9:11:8.95:124,9,0	./.	1/1:5,4:8:4.27:174,4,0	./.	1/1:8,3:10:5.94:74,6,0	1/1:7,8:15:2.99:24,3,0	1/1:19,0:18:8.86:196,9,0	1/1:22,0:22:39.66:195,40,0	1/1:13,0:13:20.11:84,20,0
chr10	16731052	.	TCG	T	3570.84	PASS	AB=1.000;AC=36;AF=0.692;AN=52;BaseQRankSum=8.090;DP=581;FS=14.385;HRun=0;HaplotypeScore=193.1648;InbreedingCoeff=0.7086;MQ=63.26;MQ0=28;MQRankSum=-7.599;QD=10.95;ReadPosRankSum=-0.022;VQSLOD=2.5379;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:25:36.11:0,36,635	1/1:3,11:14:21.04:239,21,0	0/1:71,0:24:26.15:26,0,395	0/0:82,0:36:29.21:0,29,366	1/1:3,7:10:6:67,6,0	0/0:24,0:23:47.59:0,48,797	0/0:26,0:20:35.95:0,36,640	1/1:19,0:17:42.33:240,42,0	1/1:14,0:14:2.37:8,2,0	1/1:3,24:27:78.16:1010,78,0	1/1:2,9:10:3.01:53,3,0	0/0:32,0:32:62.93:0,63,1138	1/1:14,0:14:12.03:47,12,0	1/1:15,0:15:2.84:14,3,0	1/1:8,17:24:12.95:131,13,0	0/0:22,0:22:38.91:0,39,671	1/1:7,2:7:7.27:84,7,0	0/0:19,0:18:45:0,45,748	1/1:11,0:9:19.43:77,19,0	1/1:10,0:10:5.19:20,5,0	0/1:6,0:5:0.08:0,0,0	1/1:8,0:7:10.69:50,11,0	./.	1/1:8,1:8:2.60:10,3,0	./.	1/1:4,14:17:45.12:604,45,0	1/1:0,21:21:45.14:566,45,0	1/1:2,12:14:27.07:323,27,0
chr10	16731063	.	GTC	G	1888.48	PASS	AB=0.948;AC=26;AF=0.542;AN=48;BaseQRankSum=9.056;DP=594;FS=0.544;HRun=0;HaplotypeScore=203.0752;InbreedingCoeff=0.6223;MQ=53.65;MQ0=33;MQRankSum=-7.616;QD=7.93;ReadPosRankSum=0.286;VQSLOD=2.8458;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:22:21.07:0,21,344	1/1:15,0:13:16.69:123,17,0	0/0:55,1:17:12.54:0,13,360	0/0:71,0:25:10.10:0,10,148	./.	0/0:24,0:22:39.11:0,39,595	0/0:26,0:20:28.41:0,28,403	0/1:22,1:17:26.44:26,0,116	1/1:14,0:13:2.96:19,3,0	1/1:33,0:32:33.20:549,33,0	./.	0/0:30,0:30:47.89:0,48,792	1/1:15,3:18:12.27:75,12,0	1/1:13,0:13:2.88:38,3,0	1/1:22,0:21:3:26,3,0	0/0:23,0:23:22.91:0,23,291	1/1:6,0:4:6.01:55,6,0	0/0:18,0:17:46.33:0,46,639	0/1:14,1:11:59.39:59,0,111	1/1:11,1:12:7.50:33,7,0	0/0:9,1:8:0:0,0,0	1/1:8,0:7:5.15:47,5,0	./.	0/0:14,0:13:0.89:0,1,2	./.	1/1:20,0:19:28.12:329,28,0	1/1:27,0:27:51.40:477,51,0	1/1:12,0:12:23.98:205,24,0
chr10	16731069	.	CTG	C	3468.60	PASS	AB=0.972;AC=24;AF=0.480;AN=50;BaseQRankSum=4.876;DP=565;FS=8.363;HRun=0;HaplotypeScore=188.1900;InbreedingCoeff=0.2921;MQ=50.74;MQ0=35;MQRankSum=-7.220;QD=10.45;ReadPosRankSum=-1.750;VQSLOD=2.4765;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:24:21.94:22,0,145	1/1:2,14:14:17.79:199,18,0	0/0:47,0:15:6.88:0,7,334	0/1:62,0:19:7.82:8,0,139	./.	0/0:26,0:24:33.39:0,33,281	0/1:28,0:22:23.39:23,0,156	0/1:14,2:9:38.03:84,0,38	1/1:13,0:12:1.25:3,1,0	1/1:4,27:30:81.11:1086,81,0	./.	0/0:32,0:32:47.07:0,47,420	1/1:18,0:18:9.58:38,10,0	0/0:10,0:10:0:0,0,0	1/1:1,19:19:3.01:45,3,0	0/1:19,0:19:3.15:3,0,131	1/1:2,2:3:6.02:91,6,0	0/0:18,0:17:23.45:0,23,361	0/1:15,1:12:29.91:30,0,107	0/0:13,0:13:0.17:0,0,6	0/0:9,0:7:0:0,0,0	0/0:5,0:5:2.22:0,2,7	./.	0/0:15,0:13:2.22:0,2,7	0/0:14,0:12:0:0,0,0	1/1:4,17:19:53.57:679,54,0	1/1:6,24:29:58.31:807,58,0	1/1:0,12:12:25.89:349,26,0
chr10	16731073	.	CTCTG	C	136.17	PASS	AB=0.980;AC=9;AF=0.188;AN=48;BaseQRankSum=3.491;DP=572;FS=0.000;HRun=0;HaplotypeScore=204.1252;InbreedingCoeff=0.4382;MQ=45.23;MQ0=45;MQRankSum=-0.336;QD=1.11;ReadPosRankSum=-0.015;VQSLOD=2.5562;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:22:20.79:0,21,269	0/0:16,0:14:7.12:0,7,24	0/0:42,0:12:13.37:0,13,346	0/1:53,0:15:36.05:36,0,61	./.	0/0:27,0:25:32.25:0,32,449	0/0:27,0:20:20.69:0,21,354	0/0:18,0:10:22.26:0,22,111	1/1:12,0:11:3.01:32,3,0	0/0:33,0:31:64.49:0,64,564	./.	0/0:32,0:32:50.01:0,50,568	1/1:17,2:19:7.04:78,7,0	0/1:12,0:12:0:0,0,0	0/0:21,0:20:2.25:0,2,8	0/0:20,0:20:17.84:0,18,228	0/0:5,0:3:1.79:0,2,6	0/0:18,0:17:41.77:0,42,622	0/1:15,1:12:61.58:94,0,62	1/1:10,1:11:2.74:14,3,0	0/0:11,0:7:0:0,0,0	./.	./.	0/0:16,0:14:0.85:0,1,2	0/0:15,0:13:0.47:0,0,1	0/0:21,0:19:49.01:0,49,401	0/0:32,0:29:30.11:0,30,255	0/0:14,0:13:19.40:0,19,101
chr10	16731075	.	CTG	C	577.96	PASS	AB=0.926;AC=23;AF=0.479;AN=48;BaseQRankSum=8.921;DP=558;FS=2.005;HRun=0;HaplotypeScore=188.1006;InbreedingCoeff=0.4508;MQ=45.19;MQ0=47;MQRankSum=-5.508;QD=2.06;ReadPosRankSum=3.165;VQSLOD=2.7076;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:22:21.05:0,21,306	1/1:15,2:15:8.05:28,8,0	0/0:38,0:11:11.43:0,11,284	0/1:44,3:13:8.32:8,0,67	./.	0/0:26,0:24:33.09:0,33,515	0/0:24,0:17:20.87:0,21,379	1/1:18,0:10:12.07:142,12,0	1/1:5,7:11:3.01:32,3,0	0/1:32,0:30:43.69:44,0,124	./.	0/0:31,1:32:50.86:0,51,745	1/1:14,4:18:9:90,9,0	0/0:7,6:12:0:0,0,0	1/1:21,0:20:3.15:12,3,0	0/0:18,0:18:17.92:0,18,252	1/1:4,1:3:5.27:20,5,0	0/0:17,0:16:41.98:0,42,667	0/1:13,3:12:2.17:168,0,2	1/1:7,4:11:2.37:8,2,0	0/0:11,1:8:0:0,0,0	./.	./.	0/1:13,2:13:0:0,0,0	0/0:7,8:13:0:0,0,0	0/1:23,0:20:20.54:21,0,62	1/1:30,0:27:25.51:113,26,0	1/1:14,0:13:8.19:44,8,0
chr10	16731083	.	GTC	G	479.02	PASS	AB=0.799;AC=12;AF=0.250;AN=48;BaseQRankSum=0.421;DP=577;FS=1.661;HRun=0;HaplotypeScore=189.7199;InbreedingCoeff=0.3719;MQ=37.11;MQ0=65;MQRankSum=-3.165;QD=2.85;ReadPosRankSum=-0.705;VQSLOD=2.6165;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,2:21:15.02:0,15,187	0/0:17,0:15:5.03:0,5,74	0/1:20,0:7:14.68:15,0,38	0/1:28,0:6:0:0,0,0	./.	0/0:28,2:25:26.06:0,26,279	0/0:26,0:19:8.05:0,8,279	0/1:15,7:12:8.95:293,0,9	1/1:7,7:13:2.98:22,3,0	0/0:35,0:31:62.40:0,62,801	./.	0/0:29,2:31:34.68:0,35,421	1/1:11,8:18:10.15:70,10,0	0/1:7,7:13:0:0,0,0	0/0:26,0:24:2.94:0,3,23	0/0:15,2:17:8.52:0,9,103	0/0:9,1:7:7.31:0,7,41	0/0:17,0:15:34.75:0,35,435	0/1:10,7:13:13.22:177,0,13	1/1:11,7:14:2.86:25,3,0	0/0:13,5:13:0:0,0,0	./.	./.	0/1:9,5:11:0:0,0,0	0/0:10,9:15:0:0,0,0	0/0:30,0:26:40:0,40,407	0/0:29,0:26:14.73:0,15,271	0/0:17,0:13:19.48:0,19,222
chr10	16731091	.	G	GTC	1205.78	PASS	AB=0.963;AC=19;AF=0.413;AN=46;BaseQRankSum=-4.609;DP=584;FS=3.554;HRun=0;HaplotypeScore=187.8837;InbreedingCoeff=0.2393;MQ=30.08;MQ0=74;MQRankSum=6.105;QD=4.02;ReadPosRankSum=-0.148;VQSLOD=2.7487;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:28,1:24:9.03:144,9,0	0/0:17,0:15:10.95:0,11,64	./.	./.	./.	0/1:33,0:27:2.04:163,0,2	0/1:29,0:18:17.86:48,0,18	0/1:27,0:16:37.31:37,0,204	1/1:12,0:11:2.04:6,2,0	0/0:36,0:32:36.35:0,36,694	./.	1/1:31,1:32:6.22:313,6,0	0/1:19,0:18:0.44:0,0,28	0/1:12,0:12:0.10:0,0,0	0/0:24,0:23:2.36:0,2,9	1/1:5,12:17:9.03:155,9,0	0/0:13,0:10:5.66:0,6,56	0/1:9,8:16:23.74:428,0,24	0/1:19,0:14:18.19:18,0,161	0/0:18,0:15:2.55:0,3,11	0/1:20,0:12:0:0,0,0	1/1:14,0:13:2.99:24,3,0	./.	0/0:14,0:11:0:0,0,0	0/1:18,0:14:0:0,0,0	0/0:31,0:27:10.84:0,11,592	0/0:29,0:26:41.02:0,41,442	0/0:18,0:13:20.98:0,21,203
chr10	16731097	.	CTG	C	307.97	PASS	AB=0.987;AC=19;AF=0.413;AN=46;BaseQRankSum=-2.174;DP=582;FS=29.661;HRun=0;HaplotypeScore=183.2334;InbreedingCoeff=-0.2313;MQ=29.98;MQ0=77;MQRankSum=2.765;QD=0.83;ReadPosRankSum=-4.046;VQSLOD=-0.0439;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:31,0:24:0.46:0,0,4	0/1:16,0:14:37.51:38,0,38	./.	./.	./.	0/1:35,0:29:22.56:23,0,47	0/1:30,0:17:14.63:15,0,45	0/1:25,3:16:92.70:93,0,290	1/1:12,0:11:2.92:17,3,0	0/0:37,0:32:11.61:0,12,650	./.	0/1:31,0:31:18.16:139,0,18	0/1:18,1:18:16.66:17,0,72	0/1:12,0:11:0:0,0,0	1/1:25,1:24:1.55:4,2,0	0/1:18,0:18:16.79:17,0,23	0/1:12,0:9:18.12:18,0,29	0/1:17,1:16:10.42:10,0,129	0/1:19,0:14:26.08:26,0,221	0/0:21,0:16:2.13:0,2,7	0/0:20,0:12:0:0,0,0	0/1:15,0:14:1.43:5,0,1	./.	0/1:16,0:13:0:0,0,0	0/0:18,0:14:0:0,0,0	0/1:33,0:28:5.72:6,0,425	0/0:27,0:24:41.45:0,41,281	0/0:18,0:13:20.43:0,20,145
chr10	16731109	.	GTC	G	1342.16	PASS	AB=0.816;AC=12;AF=0.250;AN=48;BaseQRankSum=3.928;DP=581;FS=28.028;HRun=0;HaplotypeScore=162.2574;InbreedingCoeff=-0.2312;MQ=28.94;MQ0=72;MQRankSum=-3.468;QD=5.12;ReadPosRankSum=4.951;VQSLOD=1.5888;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:26:5.98:0,6,60	0/0:8,6:12:3.12:0,3,26	./.	./.	0/0:19,9:24:0.88:0,1,2	0/0:36,0:30:9.91:0,10,96	0/0:28,0:19:5.74:0,6,52	0/1:29,2:20:29.44:167,0,29	./.	0/1:31,8:34:99:271,0,328	0/0:12,11:20:6.02:0,6,84	0/1:28,0:28:15.33:15,0,31	0/1:11,6:16:23.08:23,0,30	0/0:9,2:10:5.87:0,6,35	0/0:12,10:20:2.97:0,3,20	0/0:20,0:20:3.30:0,3,26	0/1:11,2:10:26.12:28,0,26	0/1:19,1:18:25.93:26,0,98	0/1:14,3:13:19.45:62,0,19	1/1:17,4:16:5.76:37,6,0	0/0:19,4:15:0:0,0,0	0/0:14,3:16:4.75:0,5,23	0/0:9,9:13:2.22:0,2,7	./.	0/0:12,7:15:2.04:0,2,7	0/1:23,13:31:99:463,0,135	0/1:8,17:22:12.10:298,0,12	0/1:7,8:9:11.89:78,0,12
chr10	16731111	.	CTCTCTG	C	987.12	PASS	AB=1.000;AC=23;AF=0.460;AN=50;BaseQRankSum=-0.262;DP=598;FS=5.175;HRun=0;HaplotypeScore=184.8214;InbreedingCoeff=0.0987;MQ=29.45;MQ0=72;MQRankSum=-0.090;QD=2.64;ReadPosRankSum=2.245;VQSLOD=2.3015;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:32,0:26:0.78:20,1,0	0/0:14,0:12:2.07:0,2,5	./.	./.	1/1:28,0:24:2.99:23,3,0	0/1:36,0:30:27.38:27,0,46	0/0:28,0:19:6.68:0,7,43	0/1:36,0:26:53.45:53,0,206	1/1:13,0:11:0.47:1,0,0	0/1:41,0:36:99:151,0,350	0/0:22,0:19:6.01:0,6,61	0/0:29,0:29:17.11:0,17,87	0/1:17,0:16:31.52:32,0,65	1/1:11,0:10:1.79:5,2,0	0/0:24,0:22:1.07:0,1,3	1/1:17,4:21:17.27:175,17,0	0/0:14,0:11:8.81:0,9,67	1/1:19,0:18:6.58:214,7,0	0/1:17,0:13:37.54:38,0,113	0/1:22,0:17:6.78:41,0,7	0/0:23,0:15:0:0,0,0	0/0:17,0:16:4.42:0,4,16	1/1:19,0:14:2.88:15,3,0	./.	0/0:20,0:16:1.41:0,1,3	0/1:36,0:31:99:164,0,222	1/1:25,0:22:26.02:168,26,0	0/0:15,0:9:1.18:0,1,3
chr10	16731115	.	CTG	C	1544.74	PASS	AB=0.986;AC=32;AF=0.615;AN=52;BaseQRankSum=1.572;DP=588;FS=1.229;HRun=0;HaplotypeScore=156.0959;InbreedingCoeff=-0.1395;MQ=30.40;MQ0=71;MQRankSum=2.076;QD=3.08;ReadPosRankSum=0.549;VQSLOD=2.9148;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:31,0:25:9.49:19,0,9	1/1:13,1:12:12.22:88,12,0	./.	./.	1/1:28,0:24:5.98:47,6,0	0/1:36,0:30:29.91:65,0,30	0/0:20,5:17:5.46:0,5,36	0/1:33,0:24:44.07:44,0,275	1/1:13,0:11:5.99:49,6,0	0/1:39,0:34:99:290,0,338	0/1:21,0:18:16.10:16,0,25	0/1:30,0:30:15.52:16,0,48	0/1:15,1:15:46.43:46,0,54	1/1:12,0:11:9.26:44,9,0	1/1:24,1:23:5.93:41,6,0	1/1:22,0:22:16.94:150,17,0	0/1:14,1:12:3.16:13,0,3	0/1:20,1:19:5.60:186,0,6	0/1:12,0:8:16.08:16,0,93	1/1:23,0:18:5.39:28,5,0	0/0:23,0:15:0:0,0,0	0/1:17,0:16:1.73:4,0,2	1/1:18,0:13:2.92:17,3,0	0/0:18,0:15:0:0,0,0	0/0:20,0:16:2.74:0,3,13	0/1:36,0:31:99:289,0,106	1/1:25,0:22:27.77:184,28,0	1/1:15,0:9:5.36:34,5,0
chr10	16731123	.	CTG	C	1357.02	PASS	AB=0.989;AC=32;AF=0.615;AN=52;BaseQRankSum=1.252;DP=606;FS=4.451;HRun=0;HaplotypeScore=153.5794;InbreedingCoeff=-0.1571;MQ=31.02;MQ0=70;MQRankSum=1.273;QD=2.55;ReadPosRankSum=0.184;VQSLOD=2.6604;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:34,0:28:19.46:19,0,22	1/1:15,0:13:9.69:76,10,0	./.	./.	1/1:32,0:28:5.61:35,6,0	0/1:34,0:29:9.33:71,0,9	0/1:27,0:19:10.11:18,0,10	0/0:34,0:25:15.19:0,15,236	1/1:14,0:12:10.15:54,10,0	0/1:37,0:33:99:241,0,148	0/1:22,0:20:22.32:35,0,22	0/1:26,1:27:5.44:62,0,5	0/1:15,0:14:12.93:38,0,13	1/1:13,0:12:10.11:63,10,0	1/1:26,0:24:6.51:58,7,0	0/1:22,0:22:25.10:25,0,78	0/1:18,0:15:3.50:11,0,4	0/1:18,1:17:50.72:51,0,127	0/1:12,1:10:20.33:20,0,71	1/1:27,0:22:11.49:68,11,0	0/0:23,0:15:0:0,0,0	0/0:16,1:16:6.64:0,7,36	1/1:19,0:14:2.79:17,3,0	0/1:18,0:15:0:0,0,0	0/1:21,0:17:5.48:15,0,5	0/1:36,0:31:49.23:331,0,49	1/1:28,0:25:28.65:190,29,0	1/1:15,0:9:0.94:3,1,0
chr10	16731125	.	GTC	G	339.38	PASS	AB=0.990;AC=17;AF=0.327;AN=52;BaseQRankSum=-2.976;DP=609;FS=3.714;HRun=0;HaplotypeScore=153.5624;InbreedingCoeff=0.2908;MQ=31.25;MQ0=70;MQRankSum=1.994;QD=1.39;ReadPosRankSum=-2.382;VQSLOD=2.1600;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:29:5.95:0,6,45	0/1:14,0:12:9.25:18,0,9	./.	./.	1/1:30,0:26:6.47:54,6,0	0/0:33,0:28:8.19:0,8,63	0/0:27,0:19:0.30:0,0,2	0/0:38,0:29:10.48:0,10,54	1/1:13,1:12:10.50:72,10,0	0/0:35,0:31:0.81:0,1,103	0/1:23,0:21:8.71:9,0,58	0/0:27,0:27:8.80:0,9,63	1/1:14,1:14:4.78:50,5,0	1/1:11,2:12:9.86:62,10,0	0/1:24,0:23:14.53:42,0,15	0/0:22,0:22:15.39:0,15,177	0/0:12,6:15:4.42:0,4,34	0/1:18,1:17:5.58:6,0,162	0/0:16,0:13:5.81:0,6,34	1/1:26,1:22:8.68:75,9,0	0/0:23,0:14:0:0,0,0	0/0:18,0:17:7.84:0,8,79	0/0:17,2:14:1.82:0,2,5	0/0:16,3:16:2.68:0,3,11	0/0:21,0:17:5.81:0,6,44	0/1:37,0:32:30.64:31,0,121	1/1:26,2:25:9.38:73,9,0	0/0:14,0:8:2.99:0,3,23
chr10	16732080	.	GTTTA	G	8198.60	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=16.431;DP=729;FS=5.033;HRun=0;HaplotypeScore=120.6938;InbreedingCoeff=0.9993;MQ=78.06;MQ0=3;MQRankSum=-4.937;QD=39.23;ReadPosRankSum=2.103;VQSLOD=5.2003;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,117,2912	1/1:0,15:15:42.14:755,42,0	0/0:36,0:36:69.21:0,69,1551	0/0:16,0:15:29.58:0,30,754	1/1:0,22:22:63:1047,63,0	0/0:19,0:19:56.21:0,56,1300	0/0:22,0:22:57.18:0,57,1428	0/0:28,0:28:78.18:0,78,1915	0/0:28,0:28:69.79:0,70,2005	1/1:4,22:26:66.22:1119,66,0	1/1:2,16:18:45.07:767,45,0	0/0:36,0:36:99:0,99,2497	0/0:22,0:22:66.21:0,66,1658	0/0:26,0:26:69.21:0,69,1621	1/1:2,36:37:72.14:1288,72,0	0/0:49,0:48:99:0,144,3374	1/1:6,23:29:45.13:770,45,0	0/0:27,0:27:78.27:0,78,2013	0/0:21,0:21:54.19:0,54,1403	0/0:28,0:28:78.22:0,78,1806	0/0:35,0:34:96.33:0,96,2415	0/0:17,0:17:51.15:0,51,1190	0/0:17,0:17:48.14:0,48,1099	0/0:25,0:25:72.25:0,72,1844	0/0:26,0:26:72.25:0,72,1857	1/1:4,24:28:72.19:1214,72,0	1/1:1,21:22:48.16:862,48,0	1/1:2,9:11:21.07:377,21,0
chr10	16732265	.	T	TG	1223.80	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-10.461;DP=651;FS=0.000;HRun=0;HaplotypeScore=126.7295;InbreedingCoeff=0.9705;MQ=64.40;MQ0=9;MQRankSum=-1.117;QD=21.47;ReadPosRankSum=0.683;VQSLOD=4.9017;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,102,956	0/0:11,0:11:27.35:0,27,164	0/0:53,0:12:26.26:0,26,210	0/0:31,0:12:21.42:0,21,160	0/0:18,0:18:45.86:0,46,260	0/0:17,0:17:48.05:0,48,443	0/0:20,0:20:48.06:0,48,464	0/0:41,0:41:86.25:0,86,409	0/0:26,0:26:47.73:0,48,245	0/0:17,0:17:48.08:0,48,246	0/0:20,0:20:52.67:0,53,298	0/0:27,0:27:63.23:0,63,559	0/0:19,0:19:51.61:0,52,268	0/0:23,0:23:51.85:0,52,276	0/0:26,0:25:71.80:0,72,415	1/1:2,35:37:71.97:793,72,0	0/0:22,0:22:55.07:0,55,316	1/1:1,19:20:50.93:552,51,0	0/0:20,0:20:46.85:0,47,221	0/0:21,0:21:49.61:0,50,245	0/0:16,0:16:37.63:0,38,202	0/0:16,0:16:41.83:0,42,219	0/0:12,0:12:10.43:0,10,138	0/0:14,0:14:34:0,34,185	0/0:30,0:30:67.17:0,67,329	0/0:20,0:20:57.03:0,57,300	0/0:28,0:27:69.02:0,69,386	0/0:9,0:8:17.51:0,18,104
chr10	16734632	.	ACAC	A	2498.64	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=6.936;DP=554;FS=8.642;HRun=0;HaplotypeScore=113.6816;InbreedingCoeff=0.7006;MQ=72.04;MQ0=0;MQRankSum=-2.896;QD=13.80;ReadPosRankSum=4.761;VQSLOD=2.6545;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:52.76:0,53,599	1/1:7,0:7:20.57:147,21,0	0/0:16,0:16:45.09:0,45,598	0/0:14,0:12:5.17:0,5,211	0/1:25,0:25:31.79:324,0,32	0/0:27,0:27:64.47:0,64,531	0/0:22,0:22:62.46:0,62,543	0/0:19,0:19:45.06:0,45,536	0/0:17,0:17:47.38:0,47,415	1/1:23,1:24:14.76:298,15,0	1/1:10,0:10:21.34:190,21,0	0/0:30,0:30:74.65:0,75,651	0/0:21,0:21:51.53:0,52,471	0/0:18,0:18:29.80:0,30,382	1/1:33,1:34:53.57:530,54,0	0/0:34,0:34:92.80:0,93,1571	1/1:19,0:18:24.21:241,24,0	0/0:11,0:10:30.03:0,30,454	0/0:18,0:18:46.62:0,47,665	0/0:15,0:16:35.61:0,36,626	0/0:22,0:21:48.10:0,48,739	0/0:16,0:16:44.29:0,44,315	0/0:18,0:18:38.81:0,39,351	0/0:17,0:17:46.53:0,47,389	0/0:7,0:7:15.05:0,15,248	1/1:27,2:29:70.04:601,70,0	0/1:24,0:24:34.85:286,0,35	0/1:9,0:9:46.36:74,0,46
chr10	16734634	.	ACCC	A	5648.80	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-6.763;DP=548;FS=8.332;HRun=11;HaplotypeScore=104.1437;InbreedingCoeff=0.9922;MQ=71.46;MQ0=0;MQRankSum=-1.502;QD=31.04;ReadPosRankSum=3.085;VQSLOD=3.8131;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:26:62.77:0,63,505	1/1:0,8:8:21.07:267,21,0	0/0:16,0:15:27.09:0,27,451	0/0:14,0:12:15.93:0,16,220	1/1:4,21:25:56.88:716,57,0	0/0:12,0:25:56.77:0,57,437	0/0:10,0:21:50.82:0,51,393	0/0:16,0:17:21.05:0,21,372	0/0:2,0:17:47.82:0,48,369	1/1:3,21:24:63.17:810,63,0	1/1:0,9:10:27.02:330,27,0	0/0:13,0:30:59.76:0,60,460	0/0:8,0:21:50.10:0,50,403	0/0:10,0:17:35.82:0,36,329	1/1:2,32:34:81.25:1064,81,0	0/0:34,0:34:75.16:0,75,1342	1/1:1,18:18:39.12:512,39,0	0/0:12,0:12:27.06:0,27,427	0/0:17,0:17:27.07:0,27,462	0/0:16,0:17:35.33:0,35,562	0/0:22,0:22:45.04:0,45,676	0/0:8,0:16:35.85:0,36,286	0/0:5,0:18:35.83:0,36,271	0/0:7,0:17:39.33:0,39,304	0/0:6,0:6:15.02:0,15,217	1/1:3,27:30:84.22:1084,84,0	1/1:4,19:23:48.13:630,48,0	1/1:3,6:9:18.05:237,18,0
chr10	16735027	.	G	GT	1016.25	PASS	AB=0.900;AC=5;AF=0.089;AN=56;BaseQRankSum=-8.426;DP=563;FS=1.305;HRun=9;HaplotypeScore=66.1701;InbreedingCoeff=0.7688;MQ=69.41;MQ0=0;MQRankSum=1.192;QD=20.33;ReadPosRankSum=0.431;VQSLOD=4.0556;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:56.95:0,57,490	0/1:8,1:9:18.19:18,0,89	0/0:7,0:7:14.29:0,14,110	0/0:15,0:15:14.35:0,14,188	0/0:31,0:31:71.61:0,72,624	0/0:23,0:23:65.99:0,66,573	0/0:14,0:14:32.98:0,33,286	0/0:47,0:49:99:0,124,1059	0/0:17,0:17:44.99:0,45,391	0/0:14,0:14:35.98:0,36,313	0/0:25,0:25:71.98:0,72,624	0/0:12,0:12:32.99:0,33,286	0/0:18,0:18:41.98:0,42,364	0/0:23,0:23:59.96:0,60,517	0/0:28,0:28:83.98:0,84,729	1/1:2,22:24:57.15:631,57,0	0/0:22,0:22:50.75:0,51,425	1/1:2,15:16:45.12:497,45,0	0/0:22,0:22:50.97:0,51,443	0/0:27,0:27:28.49:0,28,552	0/0:16,0:16:32.96:0,33,286	0/0:12,0:11:29.99:0,30,260	0/0:18,0:18:38.96:0,39,334	0/0:15,0:15:38.99:0,39,338	0/0:20,0:20:56.99:0,57,495	0/0:29,0:29:71.97:0,72,625	0/0:22,1:23:26.82:0,27,461	0/0:11,0:11:26.99:0,27,234
chr10	16735831	.	TA	T	3470.42	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=11.154;DP=554;FS=4.639;HRun=12;HaplotypeScore=116.1411;InbreedingCoeff=0.9587;MQ=58.53;MQ0=5;MQRankSum=-5.388;QD=9.78;ReadPosRankSum=3.334;VQSLOD=2.9250;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,18:24:45.90:337,46,0	1/1:9,0:9:8.13:24,8,0	0/0:13,1:7:8.08:0,8,68	0/0:15,0:10:14.17:0,14,110	1/1:35,0:35:46.23:133,46,0	1/1:2,17:19:47.81:371,48,0	1/1:2,12:13:32.87:255,33,0	0/0:37,2:38:57.72:0,58,731	1/1:3,8:11:20.91:162,21,0	1/1:17,0:17:27.26:78,27,0	1/1:18,0:18:28.03:81,28,0	1/1:1,14:17:42.92:314,43,0	1/1:2,14:18:36.85:267,37,0	1/1:2,13:15:32.87:255,33,0	1/1:26,0:25:36.43:104,36,0	0/0:24,1:25:46.42:0,46,340	1/1:29,0:25:22.36:65,22,0	0/0:23,0:22:58.35:0,58,338	0/0:18,0:18:41.17:0,41,369	0/0:23,1:27:36.55:0,37,517	0/0:5,0:5:9.02:0,9,91	1/1:2,7:9:20.91:163,21,0	1/1:3,16:19:44.82:348,45,0	1/1:1,9:10:23.90:186,24,0	0/0:29,2:31:37.68:0,38,731	1/1:25,0:22:41.01:141,41,0	1/1:31,0:30:52.74:152,53,0	1/1:8,0:8:12.21:35,12,0
chr10	16735838	.	AAAAAAG	A	3685.36	PASS	AB=1.000;AC=16;AF=0.286;AN=56;BaseQRankSum=12.178;DP=570;FS=3.626;HRun=0;HaplotypeScore=173.3537;InbreedingCoeff=0.8355;MQ=63.27;MQ0=1;MQRankSum=-11.307;QD=17.22;ReadPosRankSum=1.507;VQSLOD=2.7760;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:22:48.15:0,48,1006	1/1:8,1:9:14.93:153,15,0	0/0:16,0:11:4.39:0,4,394	0/0:16,0:12:28.23:0,28,511	1/1:34,1:35:77.67:654,78,0	0/0:18,0:18:51.18:0,51,1157	0/0:12,0:11:33.11:0,33,730	0/0:38,0:37:93.32:0,93,2870	0/0:8,0:8:21.07:0,21,468	1/1:21,1:22:60.75:531,61,0	1/1:22,0:22:53.72:424,54,0	0/0:18,0:18:51.17:0,51,1084	0/0:16,0:16:39.13:0,39,828	0/0:14,0:14:36.11:0,36,759	1/1:26,0:25:52.34:402,52,0	0/0:25,0:25:72.25:0,72,2238	0/1:24,0:21:10.25:217,0,10	0/0:23,0:22:66.21:0,66,1905	0/0:21,0:21:63.16:0,63,1694	0/0:28,0:28:75.23:0,75,2240	0/0:4,0:4:12.03:0,12,334	0/0:10,0:10:29.13:0,29,579	0/0:21,0:21:57.55:0,58,1099	0/0:12,0:12:33.09:0,33,660	0/0:32,0:32:96.33:0,96,3021	1/1:27,1:25:36.30:537,36,0	1/1:36,0:35:77.77:646,78,0	0/1:12,0:12:2.64:120,0,3
chr10	16735839	.	AAAAAG	A	7966.77	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=2.413;DP=575;FS=1.568;HRun=0;HaplotypeScore=148.9209;InbreedingCoeff=0.9622;MQ=63.24;MQ0=1;MQRankSum=-10.871;QD=37.40;ReadPosRankSum=1.278;VQSLOD=5.0850;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:22:47.95:0,48,783	1/1:1,8:9:15:226,15,0	0/0:16,0:11:4.36:0,4,328	0/0:17,0:12:10.54:0,11,406	1/1:4,31:35:78.11:1342,78,0	0/0:18,0:18:51.17:0,51,919	0/0:12,0:11:33.11:0,33,575	0/0:40,0:39:99:0,102,2510	0/0:8,0:8:21.07:0,21,369	1/1:1,21:22:63.08:935,63,0	1/1:1,20:21:54:871,54,0	0/0:18,0:18:51.17:0,51,848	0/0:16,0:16:39.13:0,39,645	0/0:14,0:14:33.11:0,33,578	1/1:3,23:25:54.10:980,54,0	0/0:25,0:25:72.25:0,72,1921	1/1:5,19:21:32.95:623,33,0	0/0:23,0:22:66.21:0,66,1630	0/0:22,0:22:63.16:0,63,1465	0/0:30,0:30:78.22:0,78,1936	0/0:4,0:4:12.03:0,12,292	0/0:10,0:10:28.32:0,28,448	0/0:21,0:21:60.07:0,60,901	0/0:12,0:12:30.09:0,30,508	0/0:33,0:33:99:0,99,2588	1/1:2,26:26:74.55:1179,75,0	1/1:1,35:35:78.26:1471,78,0	1/1:1,11:12:18.04:340,18,0
chr10	16736847	.	GACAT	G	5033.22	PASS	AB=0.868;AC=29;AF=0.558;AN=52;BaseQRankSum=11.956;DP=716;FS=3.131;HRun=0;HaplotypeScore=138.4837;InbreedingCoeff=0.7041;MQ=63.83;MQ0=7;MQRankSum=-0.931;QD=12.13;ReadPosRankSum=1.159;VQSLOD=4.3632;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:40,2:42:21.39:21,0,1454	0/1:8,5:13:34.78:35,0,201	./.	./.	1/1:11,13:23:24.08:373,24,0	0/0:27,0:27:33.11:0,33,779	0/0:23,0:23:27.09:0,27,614	1/1:33,0:33:2.37:8,2,0	0/1:24,2:26:45.48:45,0,938	1/1:12,16:27:45.15:680,45,0	1/1:8,14:22:33.11:514,33,0	0/0:32,1:33:13.38:0,13,1265	0/0:37,0:37:63.22:0,63,1446	0/0:27,0:27:54.15:0,54,1147	1/1:13,23:36:54.18:843,54,0	0/0:18,0:37:48.16:0,48,870	1/1:9,6:16:12.38:188,12,0	0/0:14,0:21:24.04:0,24,401	1/1:12,0:23:30.03:279,30,0	1/1:17,0:38:48.65:267,49,0	1/1:18,0:23:4.96:18,5,0	0/0:18,0:18:27.08:0,27,591	0/0:27,0:27:54.19:0,54,1267	0/0:16,0:16:14.98:0,15,302	1/1:7,0:30:48.71:313,49,0	1/1:9,16:25:48.16:746,48,0	1/1:11,14:24:36.12:562,36,0	1/1:5,5:10:9.03:140,9,0
chr10	16737594	.	GACAC	G	3066.73	PASS	AB=0.830;AC=42;AF=0.840;AN=50;BaseQRankSum=2.892;DP=609;FS=1.067;HRun=0;HaplotypeScore=138.8695;InbreedingCoeff=0.0127;MQ=56.11;MQ0=14;MQRankSum=-4.300;QD=6.71;ReadPosRankSum=-1.308;VQSLOD=2.6709;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:31:3:28,3,0	1/1:7,3:11:6.01:75,6,0	./.	0/0:53,0:24:0.47:0,0,1	1/1:8,6:15:14.79:193,15,0	0/1:19,0:23:34.23:97,0,34	1/1:23,0:30:12.01:112,12,0	./.	1/1:14,0:22:24.02:221,24,0	1/1:8,5:13:15.04:211,15,0	1/1:7,4:12:3:47,3,0	1/1:16,0:27:30.03:279,30,0	1/1:9,0:20:18.02:168,18,0	1/1:13,0:19:17.90:167,18,0	1/1:20,6:28:27.07:363,27,0	0/1:23,3:31:75.33:111,0,75	0/1:14,6:21:8.36:152,0,8	0/1:15,0:22:11.26:11,0,43	1/1:5,0:9:6.48:56,6,0	1/1:10,0:14:8.95:74,9,0	./.	1/1:11,0:14:9.01:84,9,0	0/1:7,0:7:0:1,0,0	1/1:18,0:21:11.21:90,11,0	1/1:8,0:15:21.02:195,21,0	0/1:15,2:19:3.49:66,0,3	1/1:10,8:19:17.56:260,18,0	1/1:5,4:10:9.02:121,9,0
chr10	16737654	.	C	CACAA	10881.40	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-5.655;DP=714;FS=3.852;HRun=0;HaplotypeScore=175.2282;InbreedingCoeff=0.9898;MQ=59.28;MQ0=1;MQRankSum=-5.445;QD=44.78;ReadPosRankSum=2.449;VQSLOD=5.5264;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,22:29:57.20:1417,57,0	0/0:9,0:9:18.06:0,18,301	0/0:32,0:20:12.19:0,12,353	0/0:57,0:35:63.45:0,63,999	0/0:20,0:20:35.95:0,36,586	1/1:9,10:19:30.10:743,30,0	1/1:9,21:32:50.69:1263,51,0	0/0:37,0:37:75.23:0,75,1186	1/1:8,15:25:47.94:1155,48,0	0/0:23,0:23:51.16:0,51,828	0/0:14,0:14:15.05:0,15,247	1/1:15,28:43:94.21:2259,94,0	1/1:12,3:15:18.06:439,18,0	1/1:8,17:27:45.10:1061,45,0	0/0:38,0:38:90.20:0,90,1357	0/0:29,0:29:60.17:0,60,942	0/0:31,0:31:69.23:0,69,1146	0/0:30,0:30:75.21:0,75,1209	0/0:21,0:21:42.14:0,42,682	0/0:13,0:13:24.08:0,24,391	0/0:39,0:39:84.27:0,84,1379	1/1:5,10:15:30.10:736,30,0	1/1:3,9:13:24.08:572,24,0	1/1:6,17:25:50.34:1236,50,0	0/0:24,0:24:48.16:0,48,804	0/0:15,0:15:27.02:0,27,423	0/0:22,0:22:57.19:0,57,932	0/0:14,0:14:30.10:0,30,506
chr10	16737821	.	ATGTGTG	A	10247.70	PASS	AB=0.613;AC=48;AF=0.857;AN=56;BaseQRankSum=-1.957;DP=541;FS=12.235;HRun=0;HaplotypeScore=129.8271;InbreedingCoeff=0.2850;MQ=56.04;MQ0=9;MQRankSum=-2.546;QD=20.33;ReadPosRankSum=2.286;VQSLOD=3.7935;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:21,9:29:42.67:644,43,0	1/1:4,5:10:12.01:209,12,0	0/0:15,0:10:3.01:0,3,45	0/0:22,0:12:9.90:0,10,236	1/1:6,12:18:20.89:239,21,0	1/1:8,15:24:29.98:491,30,0	1/1:3,6:9:14.97:213,15,0	1/1:24,12:32:14.47:440,14,0	1/1:8,5:12:14.96:228,15,0	1/1:8,15:23:42.14:830,42,0	0/1:5,11:16:5.94:245,0,6	1/1:6,16:22:38.75:637,39,0	1/1:10,6:16:11.02:249,11,0	1/1:3,15:18:23.98:415,24,0	1/1:2,19:22:41.99:709,42,0	0/1:7,13:21:11.68:565,0,12	0/1:18,17:35:53.91:462,0,54	0/1:6,13:20:12.69:348,0,13	1/1:15,8:25:29.27:418,29,0	1/1:9,11:20:20.99:347,21,0	1/1:14,11:26:5.92:39,6,0	1/1:6,6:11:14.97:219,15,0	1/1:2,9:11:20.89:257,21,0	1/1:6,8:14:2.97:20,3,0	1/1:5,14:19:32.85:433,33,0	1/1:6,14:20:42.08:795,42,0	1/1:6,11:17:27.09:564,27,0	1/1:0,5:5:14.97:229,15,0
chr10	16738015	.	T	TA	1963.80	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-4.291;DP=323;FS=12.888;HRun=1;HaplotypeScore=43.5337;InbreedingCoeff=0.8325;MQ=62.62;MQ0=2;MQRankSum=0.926;QD=26.18;ReadPosRankSum=0.676;VQSLOD=1.9949;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,21:22:50.99:672,51,0	0/0:3,0:3:9.03:0,9,117	0/0:7,0:4:6.01:0,6,70	0/0:12,0:6:5.67:0,6,56	0/0:16,0:16:42.11:0,42,519	1/1:0,15:15:33.11:494,33,0	1/1:0,2:2:3.01:45,3,0	0/0:42,0:42:99:0,117,1460	1/1:0,2:2:3.01:45,3,0	0/0:16,0:16:48.16:0,48,621	0/0:10,0:10:27.09:0,27,350	1/1:0,13:13:21.07:314,21,0	1/1:0,8:8:15.05:224,15,0	1/1:1,4:5:9.03:135,9,0	0/0:6,0:6:15.05:0,15,194	0/0:6,0:6:17.99:0,18,211	0/0:26,0:26:69.22:0,69,894	0/0:24,0:24:63.16:0,63,782	0/0:6,0:6:18.06:0,18,233	0/0:7,0:7:21.07:0,21,272	0/0:5,0:5:12.04:0,12,156	1/1:0,3:3:6.02:90,6,0	1/1:0,3:3:5.94:90,6,0	1/1:1,1:2:5.05:51,5,0	0/0:15,0:14:39.12:0,39,493	0/0:15,0:15:45.15:0,45,584	0/0:22,0:22:57.18:0,57,739	0/0:10,0:10:30.07:0,30,371
chr10	16738030	.	T	TTA	2994.02	PASS	AB=1.000;AC=11;AF=0.212;AN=52;BaseQRankSum=-10.334;DP=312;FS=14.164;HRun=0;HaplotypeScore=46.8946;InbreedingCoeff=0.7727;MQ=69.50;MQ0=2;MQRankSum=1.643;QD=31.52;ReadPosRankSum=-3.498;VQSLOD=3.0107;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:57.11:0,57,701	0/0:3,0:3:6.02:0,6,78	0/0:10,0:5:12.02:0,12,127	0/1:13,0:8:2.87:3,0,7	0/0:16,0:16:45.15:0,45,585	0/0:11,0:11:21.07:0,21,273	0/0:2,0:2:6.02:0,6,77	1/1:11,38:50:99:1893,117,0	./.	0/0:13,0:13:33.11:0,33,429	0/0:9,0:9:18.06:0,18,234	0/0:10,0:10:21.07:0,21,273	0/0:3,0:3:9.03:0,9,117	0/0:4,0:4:9.03:0,9,117	0/0:5,0:5:9.03:0,9,117	0/0:6,0:6:15.05:0,15,195	0/0:27,0:27:63.73:0,64,853	0/0:24,0:24:60.16:0,60,759	1/1:0,6:6:18.06:306,18,0	1/1:0,8:8:24.08:394,24,0	1/1:0,4:4:9.03:153,9,0	0/0:2,0:2:6.02:0,6,78	./.	0/0:2,0:2:3.01:0,3,39	1/1:2,12:13:24.08:408,24,0	0/0:16,0:16:48.16:0,48,622	0/0:16,0:16:39.13:0,39,507	0/0:8,0:8:21.07:0,21,273
chr10	16738148	.	TTA	T	4157.16	PASS	AB=0.875;AC=34;AF=0.630;AN=54;BaseQRankSum=-10.925;DP=301;FS=3.189;HRun=0;HaplotypeScore=49.7905;InbreedingCoeff=0.5817;MQ=69.88;MQ0=4;MQRankSum=2.198;QD=19.34;ReadPosRankSum=-2.155;VQSLOD=2.9561;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,28:35:52.24:774,52,0	0/0:2,0:2:3:0,3,28	0/1:11,0:9:10.10:10,0,77	0/1:18,0:6:4.48:4,0,35	0/0:8,0:8:17.96:0,18,161	1/1:3,11:14:21.07:263,21,0	1/1:0,3:3:6.02:75,6,0	1/1:9,22:31:66.12:725,66,0	1/1:1,1:2:3.01:38,3,0	0/0:14,0:14:38.94:0,39,327	0/0:8,0:8:15.03:0,15,148	1/1:2,10:12:21.07:263,21,0	1/1:1,7:8:21.07:263,21,0	1/1:0,2:2:6.02:75,6,0	0/0:5,0:5:15.02:0,15,141	1/1:0,5:5:15.05:188,15,0	0/0:23,0:23:13.20:0,13,422	0/1:4,17:21:1.37:514,0,1	1/1:3,6:9:0.24:204,0,0	1/1:1,2:3:6.02:75,6,0	1/1:0,5:5:15.05:188,15,0	./.	1/1:1,3:4:9.03:111,9,0	1/1:0,7:7:12.04:150,12,0	1/1:0,6:7:17.89:202,18,0	0/1:17,1:18:36.14:36,0,289	0/0:18,0:18:26.23:0,26,429	0/0:8,0:8:20.92:0,21,179
chr10	16740259	.	CTGTG	C	466.04	PASS	AB=1.000;AC=19;AF=0.380;AN=50;BaseQRankSum=1.900;DP=455;FS=0.000;HRun=0;HaplotypeScore=72.3549;InbreedingCoeff=0.5111;MQ=65.21;MQ0=12;MQRankSum=0.061;QD=3.15;ReadPosRankSum=0.790;VQSLOD=1.3316;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:21:17.79:0,18,309	1/1:5,1:6:3.01:46,3,0	./.	./.	1/1:7,0:6:2.80:13,3,0	0/0:18,0:19:17.77:0,18,214	0/0:15,0:14:3.01:0,3,59	0/0:24,0:24:0:0,0,0	1/1:12,0:12:6.02:86,6,0	1/1:8,0:7:2.92:46,3,0	1/1:16,2:18:6.02:92,6,0	0/0:9,0:8:8.97:0,9,70	0/0:15,0:15:5.99:0,6,50	./.	1/1:13,0:13:3.01:43,3,0	1/1:11,0:12:3:28,3,0	1/1:16,11:24:14.72:228,15,0	1/1:17,0:20:3.89:30,4,0	0/0:24,0:23:9:0,9,150	0/0:11,0:10:6.01:0,6,95	0/0:28,0:33:11.76:0,12,141	0/0:16,0:16:6.02:0,6,108	0/0:7,0:8:8.75:0,9,78	0/1:24,0:24:5.58:6,0,367	0/0:19,0:20:14.79:0,15,258	0/0:11,0:11:0:0,0,0	0/0:15,0:14:2.74:0,3,12	0/0:11,0:10:2.60:0,3,10
chr10	16743923	.	T	TTTTTTTTG	9738.27	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=-6.938;DP=686;FS=4.526;HRun=0;HaplotypeScore=183.4180;InbreedingCoeff=0.7701;MQ=60.59;MQ0=2;MQRankSum=-8.385;QD=34.29;ReadPosRankSum=-3.612;VQSLOD=3.9592;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:28.99:0,29,1285	1/1:6,3:10:15.05:515,15,0	0/0:20,0:12:1.30:0,1,3	0/1:17,0:10:6.29:6,0,26	1/1:16,13:30:36.11:1235,36,0	0/0:15,0:15:27.09:0,27,619	0/0:28,0:28:60.20:0,60,1380	0/0:24,0:24:16.21:0,16,376	0/0:22,0:22:30.10:0,30,713	1/1:19,13:34:48.10:1596,48,0	1/1:11,7:19:25.32:694,25,0	0/0:21,0:21:45.15:0,45,970	0/0:26,0:26:57.16:0,57,1192	0/0:27,0:27:60.18:0,60,1276	1/1:10,21:33:45.15:1740,45,0	0/0:40,0:40:75.72:0,76,1339	1/1:11,5:17:18.26:489,18,0	0/0:29,0:29:27.28:0,27,428	0/1:23,0:23:31.21:31,0,165	0/0:30,0:30:48.16:0,48,824	0/0:21,0:21:23.51:0,24,586	0/0:22,0:22:33.11:0,33,765	0/0:20,0:20:36.12:0,36,862	0/0:28,0:28:48.16:0,48,1153	0/1:29,0:29:3.76:4,0,675	1/1:11,11:21:39.13:1312,39,0	1/1:16,14:31:48.16:1754,48,0	1/1:10,6:18:9.03:361,9,0
chr10	16743940	.	TTTTTTTG	T	2341.11	PASS	AB=1.000;AC=6;AF=0.107;AN=56;BaseQRankSum=2.675;DP=701;FS=7.708;HRun=0;HaplotypeScore=190.2471;InbreedingCoeff=0.6298;MQ=63.85;MQ0=4;MQRankSum=-6.381;QD=18.58;ReadPosRankSum=0.961;VQSLOD=2.5225;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:78.93:0,79,2482	0/0:8,0:8:21.05:0,21,553	0/1:31,0:18:10.52:11,0,231	0/0:24,0:10:9.50:0,9,68	0/0:29,0:29:74.69:0,75,1830	0/0:13,0:13:33.10:0,33,1131	0/0:22,0:22:66.21:0,66,2306	0/0:27,0:27:61.49:0,61,1146	0/0:19,0:18:54.16:0,54,1583	0/0:38,0:38:99:0,99,2238	0/0:19,0:19:48.14:0,48,1408	0/0:22,0:22:60.19:0,60,1917	0/0:30,0:30:84.23:0,84,2347	0/0:26,0:26:75.25:0,75,2515	0/0:34,0:34:62.93:0,63,1759	1/1:1,41:42:78.27:1886,78,0	0/0:17,0:17:33.56:0,34,685	1/1:4,25:29:15.89:568,16,0	0/1:24,0:24:5.76:6,0,467	0/0:34,0:33:30.13:0,30,1160	0/0:17,0:17:38.70:0,39,873	0/0:21,0:21:54.15:0,54,1731	0/0:21,0:21:54.14:0,54,1558	0/0:28,0:28:81.22:0,81,2246	0/0:31,0:31:54.17:0,54,1285	0/0:22,0:21:66.21:0,66,1741	0/0:31,0:31:69.19:0,69,1992	0/0:10,0:10:9.03:0,9,301
chr10	16746959	.	A	AAT	11941.63	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-16.743;DP=708;FS=3.904;HRun=0;HaplotypeScore=79.6753;InbreedingCoeff=0.9993;MQ=82.84;MQ0=0;MQRankSum=-1.976;QD=49.96;ReadPosRankSum=0.834;VQSLOD=5.4356;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,117,1682	1/1:0,8:8:24.08:445,24,0	0/0:22,0:22:66.22:0,66,971	0/0:19,0:19:33.04:0,33,439	1/1:3,32:35:93.32:1733,93,0	0/0:28,0:28:81.27:0,81,1193	0/0:28,0:28:78.25:0,78,1125	0/0:33,0:33:93.30:0,93,1336	0/0:20,0:20:60.20:0,60,880	1/1:3,38:41:99:2197,120,0	1/1:0,17:17:45.15:838,45,0	0/0:24,0:24:72.24:0,72,1059	0/0:27,0:27:75.25:0,75,1103	0/0:22,0:22:63.20:0,63,907	1/1:2,31:34:87.30:1630,87,0	0/0:31,0:31:93.30:0,93,1351	1/1:1,31:32:81.28:1517,81,0	0/0:21,0:21:60.20:0,60,883	0/0:19,0:19:57.19:0,57,838	0/0:34,0:34:96.32:0,96,1413	0/0:23,0:23:69.19:0,69,974	0/0:22,0:22:63.21:0,63,925	0/0:18,0:18:51.16:0,51,733	0/0:25,0:25:72.24:0,72,1060	0/0:12,0:12:36.08:0,36,488	1/1:2,27:30:87.25:1563,87,0	1/1:0,30:31:84.29:1569,84,0	1/1:2,8:11:24.08:450,24,0
chr10	16747864	.	CCACACACACACACACACACA	C	1240.81	PASS	AC=8;AF=0.167;AN=48;BaseQRankSum=4.632;DP=611;FS=1.348;HRun=0;HaplotypeScore=261.5652;InbreedingCoeff=0.7499;MQ=60.82;MQ0=40;MQRankSum=-1.995;QD=14.26;ReadPosRankSum=0.615;VQSLOD=2.5038;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:30:30.10:0,30,1552	./.	./.	0/0:31,0:18:0:0,0,0	0/0:15,6:21:0.47:0,0,1	0/0:12,0:12:12.04:0,12,651	0/0:34,0:36:42.97:0,43,1847	0/0:32,0:28:18.03:0,18,203	0/0:24,0:23:15.52:0,16,853	./.	./.	0/0:25,0:24:30.10:0,30,1444	0/0:16,0:16:22.63:0,23,1050	0/0:13,0:14:21.07:0,21,1187	1/1:29,8:38:8.93:476,9,0	0/0:23,0:22:24.97:0,25,1251	0/0:22,4:27:2.97:0,3,20	0/0:17,0:21:35.71:0,36,2287	0/0:9,0:9:9.87:0,10,345	0/0:14,0:13:9.03:0,9,748	0/0:42,0:41:45.15:0,45,2960	0/0:16,0:17:30.08:0,30,1509	0/0:17,0:16:15.05:0,15,1102	0/0:30,0:28:51.15:0,51,3181	0/0:11,0:11:15.05:0,15,1238	1/1:21,5:24:9.47:141,9,0	1/1:10,5:14:12.04:596,12,0	1/1:5,1:6:3.01:159,3,0
chr10	16747919	.	C	CAG	4887.58	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=0.509;DP=626;FS=4.843;HRun=0;HaplotypeScore=105.0324;InbreedingCoeff=0.9307;MQ=69.13;MQ0=20;MQRankSum=0.279;QD=13.69;ReadPosRankSum=1.462;VQSLOD=4.3550;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:34,0:34:68.05:586,68,0	0/0:6,0:4:8.99:0,9,74	0/0:31,0:22:62.83:0,63,590	0/0:34,0:23:62.91:0,63,607	0/0:17,0:17:29.82:0,30,243	1/1:25,0:25:56.75:468,57,0	1/1:31,0:30:74.19:588,74,0	1/1:25,0:24:59.95:532,60,0	1/1:15,0:15:35.24:267,35,0	0/0:27,0:24:65.97:0,66,600	0/0:7,0:7:17.94:0,18,143	1/1:20,0:19:33.38:299,33,0	1/1:18,0:18:53.85:431,54,0	1/1:17,0:16:41.01:304,41,0	0/0:21,0:20:35.66:0,36,275	0/0:29,0:28:51.25:0,51,487	0/0:32,0:28:53.58:0,54,400	0/0:22,0:22:12.99:0,13,283	1/1:18,0:17:41.91:350,42,0	1/1:16,0:16:35.39:271,35,0	1/1:11,51:63:5.68:67,6,0	1/1:15,0:14:27.92:212,28,0	1/1:12,0:11:9.30:136,9,0	1/1:33,0:31:16.47:321,16,0	1/1:0,14:14:3.01:56,3,0	0/0:25,0:24:59.93:0,60,519	0/0:15,0:14:29.81:0,30,235	0/0:3,0:3:8.98:0,9,73
chr10	16749175	.	CGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	C	3743.02	PASS	AB=0.743;AC=13;AF=0.250;AN=52;BaseQRankSum=6.051;DP=685;FS=0.750;HRun=0;HaplotypeScore=491.6703;InbreedingCoeff=0.7474;MQ=59.22;MQ0=11;MQRankSum=-2.444;QD=21.15;ReadPosRankSum=-3.340;VQSLOD=0.0070;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:31:44.14:0,44,4853	1/1:4,6:10:2.95:287,3,0	0/0:35,0:11:9.50:0,9,318	0/0:42,0:17:21.07:0,21,711	1/1:10,0:10:6.02:116,6,0	0/0:13,0:15:23.04:0,23,2480	0/0:25,0:25:57.20:0,57,5959	0/0:26,0:26:36.12:0,36,1897	0/0:17,0:17:33.08:0,33,3648	1/1:15,16:31:40.36:1131,40,0	./.	0/0:27,0:29:42.08:0,42,4000	0/0:12,0:12:21.86:0,22,1587	0/0:23,0:24:42.62:0,43,4451	1/1:19,14:33:3.01:248,3,0	0/0:17,0:17:38.12:0,38,3279	1/1:18,16:33:5.95:440,6,0	0/0:27,0:25:60.21:0,60,8045	0/0:21,0:21:15.05:0,15,988	0/0:13,0:15:25.44:0,25,1275	0/0:55,0:58:80.24:0,80,7526	0/0:16,0:16:18.06:0,18,1643	0/0:11,0:11:18.06:0,18,1932	0/0:47,0:50:99:0,102,14265	0/0:20,0:20:24.55:0,25,2163	0/1:17,9:25:11.34:683,0,11	1/1:17,15:32:7.72:838,8,0	./.
chr10	16749213	.	T	TC	788.82	PASS	AB=1.000;AC=13;AF=0.241;AN=54;BaseQRankSum=7.692;DP=657;FS=0.767;HRun=0;HaplotypeScore=95.7332;InbreedingCoeff=0.6823;MQ=49.57;MQ0=42;MQRankSum=-0.069;QD=9.17;ReadPosRankSum=-4.283;VQSLOD=2.8700;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:39:83.68:0,84,1090	1/1:6,0:6:3:29,3,0	0/0:66,0:8:7.36:0,7,158	0/0:67,0:11:20.48:0,20,262	1/1:2,6:7:3:40,3,0	0/0:19,0:18:33.38:0,33,374	0/0:29,0:27:68.85:0,69,763	0/0:15,0:12:30.10:0,30,414	0/0:17,0:16:39.13:0,39,538	1/1:20,0:19:34.46:523,34,0	1/1:2,4:5:9.03:137,9,0	0/0:16,0:16:32.94:0,33,405	0/0:17,0:17:39.13:0,39,539	0/0:21,0:21:42.10:0,42,557	1/1:17,0:17:3.01:45,3,0	0/0:18,0:18:40.06:0,40,524	1/1:17,0:17:0.72:47,1,0	0/0:33,0:30:84:0,84,1045	0/0:11,0:11:32.84:0,33,425	0/0:14,0:13:27.09:0,27,362	0/0:60,0:58:99:0,123,1538	0/0:18,0:17:33.10:0,33,438	0/0:13,0:13:33.11:0,33,455	0/0:54,0:53:99:0,129,1740	0/0:24,0:24:48.16:0,48,660	0/1:12,0:10:22.85:123,0,23	0/0:17,0:16:6:0,6,18	./.
chr10	16749821	.	G	GA	4647.44	PASS	AB=0.889;AC=20;AF=0.357;AN=56;BaseQRankSum=-14.107;DP=677;FS=0.000;HRun=9;HaplotypeScore=111.8200;InbreedingCoeff=0.6978;MQ=87.45;MQ0=1;MQRankSum=-1.336;QD=15.39;ReadPosRankSum=-0.417;VQSLOD=4.4117;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,104,864	1/1:2,12:14:27.07:297,27,0	0/0:57,0:44:36.12:0,36,384	0/1:53,0:39:30.08:30,0,191	1/1:3,21:24:60.08:637,60,0	0/0:17,0:17:47.95:0,48,409	0/0:20,0:20:47.07:0,47,383	0/1:32,0:32:20.67:161,0,21	0/0:16,0:16:47.99:0,48,415	0/1:3,12:15:4.73:331,0,5	1/1:4,13:17:33:345,33,0	0/0:18,0:18:53.57:0,54,448	0/0:14,0:15:41.09:0,41,328	0/0:20,0:20:51.91:0,52,439	1/1:5,24:30:60.03:646,60,0	0/0:25,0:25:65.96:0,66,568	1/1:3,24:27:38:639,38,0	0/0:26,0:26:65.93:0,66,564	0/0:21,0:21:24.83:0,25,70	0/1:24,0:24:6.42:6,0,88	0/0:12,0:12:16.09:0,16,50	0/0:20,0:20:47.99:0,48,416	0/0:21,0:21:50.97:0,51,438	0/0:22,0:23:57.71:0,58,450	0/0:19,0:19:34.98:0,35,111	1/1:4,16:20:25.06:485,25,0	1/1:5,30:35:72.03:797,72,0	1/1:2,9:11:4.05:273,4,0
chr10	16751699	.	CT	C	4653.16	PASS	AB=0.643;AC=27;AF=0.482;AN=56;BaseQRankSum=7.782;DP=597;FS=7.944;HRun=11;HaplotypeScore=68.2498;InbreedingCoeff=0.9064;MQ=72.44;MQ0=10;MQRankSum=0.232;QD=16.05;ReadPosRankSum=2.819;VQSLOD=5.4997;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:79.38:0,79,797	1/1:6,12:18:35.94:295,36,0	0/0:22,2:9:11.90:0,12,95	0/0:30,0:20:10.25:0,10,193	1/1:3,15:17:19.51:298,20,0	0/0:14,0:16:35.92:0,36,366	0/0:27,0:27:60.04:0,60,594	1/1:6,24:29:71.31:563,71,0	0/0:24,0:24:51.11:0,51,529	1/1:4,21:23:56.88:464,57,0	1/1:1,8:9:20.96:172,21,0	0/0:28,0:28:63:0,63,606	0/0:14,0:14:32.08:0,32,309	0/0:24,0:24:54.07:0,54,538	1/1:5,18:21:50.05:417,50,0	0/0:19,0:19:46.88:0,47,472	1/1:7,24:30:50.17:417,50,0	0/0:16,0:16:36.07:0,36,374	0/1:8,10:16:5.08:164,0,5	1/1:3,13:17:37.95:301,38,0	1/1:5,21:23:50.91:418,51,0	0/0:20,0:20:43.80:0,44,430	0/0:14,0:14:2.50:0,3,224	0/0:13,0:13:27.07:0,27,287	1/1:5,12:16:29.94:246,30,0	1/1:9,23:31:62.35:498,62,0	1/1:6,12:18:31.97:252,32,0	1/1:1,6:7:17.97:148,18,0
chr10	16753408	.	TGGATG	T	3912.02	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.974;DP=899;FS=5.521;HRun=0;HaplotypeScore=168.0046;InbreedingCoeff=0.9979;MQ=68.08;MQ0=0;MQRankSum=-3.568;QD=57.53;ReadPosRankSum=2.232;VQSLOD=4.0492;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,160,5040	0/0:7,0:7:21.07:0,21,679	0/0:24,0:22:62.58:0,63,1866	0/0:31,0:28:78.26:0,78,2323	0/0:26,0:26:78.27:0,78,2468	0/0:25,0:25:72.23:0,72,2252	0/0:33,0:33:99:0,99,3128	0/0:44,0:44:99:0,129,3998	0/0:43,0:43:99:0,129,4081	0/0:33,0:33:93.32:0,93,3006	0/0:22,0:22:63.22:0,63,1941	0/0:33,0:33:96.33:0,96,3100	0/0:29,0:29:87.30:0,87,2716	0/0:37,0:37:99:0,108,3387	0/0:53,0:53:99:0,160,5047	1/1:0,41:41:99:2440,111,0	0/0:38,0:38:99:0,114,3556	1/1:1,26:27:66.23:1472,66,0	0/0:20,0:20:60.21:0,60,1874	0/0:26,0:26:78.27:0,78,2450	0/0:63,0:63:99:0,190,6006	0/0:19,0:19:57.20:0,57,1832	0/0:25,0:25:75.26:0,75,2330	0/0:40,0:40:99:0,120,3867	0/0:15,0:15:42.14:0,42,1291	0/0:43,0:43:99:0,126,3856	0/0:33,0:33:96.33:0,96,2956	0/0:14,0:14:42.14:0,42,1337
chr10	16755169	.	TACACAC	T	1476.40	PASS	AC=22;AF=0.423;AN=52;BaseQRankSum=3.983;DP=620;FS=0.839;HRun=0;HaplotypeScore=134.9322;InbreedingCoeff=0.7697;MQ=75.06;MQ0=15;MQRankSum=-5.695;QD=6.26;ReadPosRankSum=2.577;VQSLOD=1.8572;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:41,0:40:9.01:119,9,0	0/0:12,0:11:15.05:0,15,366	./.	./.	0/0:24,0:24:18.06:0,18,477	1/1:12,3:15:3.01:60,3,0	1/1:18,0:18:2.98:22,3,0	0/0:27,0:25:20.10:0,20,429	1/1:13,2:15:5.98:74,6,0	0/0:17,0:17:33.11:0,33,838	0/0:15,0:15:5.07:0,5,125	1/1:19,6:26:21.03:365,21,0	1/1:10,4:15:6.02:121,6,0	1/1:14,3:17:12.04:219,12,0	0/0:22,0:35:15.05:0,15,435	1/1:16,0:29:24.08:333,24,0	0/0:12,0:27:9.03:0,9,232	1/1:12,0:17:12.04:167,12,0	0/0:10,0:9:9.03:0,9,233	0/0:15,0:14:24.08:0,24,645	0/0:38,0:35:39.12:0,39,965	1/1:9,7:16:6.02:121,6,0	0/0:7,3:9:0:0,0,1	1/1:23,4:26:2.58:60,3,0	0/0:14,0:13:12.03:0,12,287	0/0:25,0:25:27.56:0,28,723	0/0:24,0:24:15.05:0,15,412	0/0:10,0:10:12.04:0,12,325
chr10	16757177	.	GT	G	8560.77	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=16.494;DP=641;FS=1.039;HRun=9;HaplotypeScore=135.8121;InbreedingCoeff=0.9991;MQ=81.36;MQ0=0;MQRankSum=-5.432;QD=22.41;ReadPosRankSum=2.499;VQSLOD=3.4812;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:75.20:0,75,846	1/1:1,17:18:48.02:439,48,0	0/0:27,0:27:49.05:0,49,485	0/0:25,1:25:26.21:0,26,353	1/1:3,17:20:48.50:440,48,0	0/0:21,0:21:57.17:0,57,658	0/0:22,0:23:59.90:0,60,634	1/1:9,24:33:75.89:678,76,0	0/0:14,0:14:36.11:0,36,415	1/1:6,23:29:72.41:641,72,0	1/1:0,21:21:57.03:521,57,0	0/0:14,0:14:39.08:0,39,422	0/0:19,0:19:42.10:0,42,466	0/0:25,0:25:69.19:0,69,787	1/1:3,24:27:65.93:586,66,0	1/1:5,24:29:66.81:592,67,0	1/1:1,24:25:72.04:658,72,0	1/1:2,17:19:51.03:466,51,0	1/1:4,23:27:68.97:613,69,0	1/1:2,15:17:36.01:329,36,0	1/1:4,14:18:36.01:329,36,0	0/0:16,0:16:39.09:0,39,427	0/0:25,0:26:66.17:0,66,742	0/0:19,1:20:29.71:0,30,584	1/1:2,20:22:54.03:493,54,0	1/1:3,35:38:99:955,105,0	1/1:2,29:31:72:656,72,0	1/1:3,5:8:21.12:165,21,0
chr10	16757421	.	T	TA	10845.98	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-17.277;DP=691;FS=2.086;HRun=8;HaplotypeScore=68.8272;InbreedingCoeff=0.9994;MQ=79.94;MQ0=0;MQRankSum=-1.575;QD=29.39;ReadPosRankSum=0.176;VQSLOD=5.0034;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:84.03:0,84,762	1/1:2,8:10:24.07:277,24,0	0/0:23,0:23:41.95:0,42,383	0/0:10,0:11:32.97:0,33,291	1/1:1,25:26:69.16:781,69,0	0/0:23,0:23:56.98:0,57,507	0/0:18,0:18:51.01:0,51,461	1/1:3,26:29:74.71:855,75,0	0/0:20,0:20:45.01:0,45,412	1/1:1,23:24:63.15:703,63,0	1/1:1,8:9:24.07:277,24,0	0/0:30,0:30:63.01:0,63,576	0/0:20,0:20:54.03:0,54,494	0/0:31,0:31:87.03:0,87,792	1/1:2,40:42:99:1281,111,0	0/0:39,0:39:90.02:0,90,816	1/1:4,35:39:99:1143,99,0	0/0:23,0:23:66.01:0,66,597	1/1:3,26:30:81.06:879,81,0	1/1:8,21:30:44.54:734,45,0	1/1:5,17:22:48.14:554,48,0	0/0:18,0:18:48.02:0,48,439	0/0:18,0:18:51.03:0,51,467	0/0:18,0:18:48.01:0,48,436	1/1:2,26:28:78.23:900,78,0	1/1:1,32:33:96.27:1098,96,0	1/1:2,30:32:78.23:900,78,0	1/1:0,14:15:41.96:465,42,0
chr10	16757964	.	A	AAACAAAC	942.40	PASS	AB=0.977;AC=18;AF=0.321;AN=56;BaseQRankSum=-3.026;DP=605;FS=12.635;HRun=0;HaplotypeScore=139.1045;InbreedingCoeff=-0.3183;MQ=51.18;MQ0=78;MQRankSum=-0.969;QD=2.70;ReadPosRankSum=-3.168;VQSLOD=1.0878;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:27:17.06:0,17,102	0/0:8,0:5:5.14:0,5,48	0/0:41,0:8:15.93:0,16,134	0/0:62,0:11:17.55:0,18,222	0/1:27,0:23:39.60:40,0,83	0/0:17,0:14:14.62:0,15,105	0/1:17,0:15:15.44:15,0,57	0/1:36,0:33:55.06:78,0,55	0/1:10,0:9:2.02:2,0,31	0/1:27,0:22:26.08:26,0,64	0/1:19,0:18:4.48:58,0,4	0/0:18,0:18:23.80:0,24,160	0/1:13,0:12:8.10:8,0,40	0/0:9,0:9:17.03:0,17,72	0/1:18,0:18:14.10:22,0,14	0/1:8,8:19:83.31:83,0,87	0/0:21,0:19:27.09:0,27,123	0/1:31,0:28:22.20:541,0,22	0/1:26,0:16:25.62:53,0,26	0/1:20,0:17:36.23:36,0,74	0/0:7,0:4:2.96:0,3,8	0/1:6,0:6:5.01:5,0,12	0/0:12,0:10:5.49:0,5,29	0/1:14,0:13:26.58:27,0,41	1/1:16,0:16:0.26:23,0,0	0/1:23,0:19:63.79:65,0,64	0/1:27,0:25:10.83:11,0,98	0/0:33,0:18:19.13:0,19,175
chr10	16757966	.	A	AC	2978.92	PASS	AB=0.924;AC=28;AF=0.500;AN=56;BaseQRankSum=-8.359;DP=625;FS=269.075;HRun=0;HaplotypeScore=71.9195;InbreedingCoeff=-0.3960;MQ=50.40;MQ0=86;MQRankSum=4.050;QD=6.32;ReadPosRankSum=6.780;VQSLOD=-0.4560;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,14:30:10.85:0,11,129	1/1:7,0:4:11.65:75,12,0	0/0:43,0:8:18.78:0,19,127	0/0:64,0:11:10.86:0,11,137	1/1:28,0:23:2.04:243,2,0	0/1:18,0:15:45.78:174,0,46	0/1:6,11:16:12.57:13,0,19	0/1:21,15:32:95.30:234,0,95	0/1:10,0:9:41.16:41,0,50	0/1:27,0:21:11.29:292,0,11	0/1:19,0:18:2.96:196,0,3	0/1:18,0:18:59.53:60,0,165	0/1:13,0:12:0.64:182,0,1	0/1:9,0:9:41.30:102,0,41	0/1:3,15:18:20.27:31,0,20	0/0:16,0:16:8.51:0,9,128	0/1:24,0:21:53.18:200,0,53	0/1:27,1:25:67.85:178,0,68	0/1:32,0:20:62.03:113,0,62	0/1:21,0:18:16.05:246,0,16	0/1:8,0:5:21.84:50,0,22	1/1:4,2:6:17.65:114,18,0	1/1:13,0:11:4.71:63,5,0	0/1:14,0:13:66.87:76,0,67	0/1:16,0:15:0.24:109,0,0	0/1:27,0:23:76.15:200,0,76	0/1:14,13:25:16.12:16,0,144	0/1:33,0:18:47.78:131,0,48
chr10	16758971	.	AACACACACACACAC	A	4166.40	PASS	AB=0.753;AC=15;AF=0.278;AN=54;BaseQRankSum=0.733;DP=588;FS=7.535;HRun=0;HaplotypeScore=205.3909;InbreedingCoeff=0.5357;MQ=49.35;MQ0=11;MQRankSum=-2.885;QD=20.13;ReadPosRankSum=0.756;VQSLOD=1.6328;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:19,20:39:19.92:168,0,20	0/0:9,0:9:12.04:0,12,173	./.	0/0:24,0:7:9.03:0,9,128	0/0:21,0:21:30.54:0,31,501	0/1:8,18:25:47.30:491,0,47	0/1:17,1:18:34.52:279,0,35	0/0:38,0:38:54.63:0,55,878	1/1:6,9:16:9.03:334,9,0	0/0:23,0:21:33.54:0,34,1043	0/0:20,0:20:27.39:0,27,407	0/1:5,16:21:3.49:603,0,3	1/1:4,11:15:21:632,21,0	1/1:1,12:12:15.01:493,15,0	0/0:23,0:23:12.86:0,13,465	0/1:16,0:16:2.08:2,0,431	0/0:20,0:20:24.55:0,25,650	0/0:14,0:14:33.09:0,33,678	0/0:16,0:15:25.47:0,25,483	0/0:24,0:23:20.93:0,21,443	0/0:28,0:25:17.07:0,17,508	1/1:2,16:18:18.41:511,18,0	1/1:11,13:24:24.77:654,25,0	0/0:15,14:29:3.32:0,3,29	0/0:20,0:19:15.57:0,16,254	0/0:21,0:21:34.32:0,34,1368	0/0:21,0:21:17.10:0,17,568	0/0:5,0:5:15.05:0,15,466
chr10	16758993	.	C	CACACGCACAA	1303.10	PASS	AB=0.934;AC=9;AF=0.167;AN=54;BaseQRankSum=1.508;DP=612;FS=8.001;HRun=0;HaplotypeScore=213.1669;InbreedingCoeff=0.0482;MQ=44.91;MQ0=22;MQRankSum=-3.140;QD=6.72;ReadPosRankSum=2.219;VQSLOD=1.7272;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:36:34.51:0,35,430	0/0:9,0:9:20.51:0,21,195	./.	0/0:26,0:4:8.96:0,9,68	0/0:25,0:24:44.38:0,44,529	0/0:25,0:24:33.05:0,33,499	0/0:18,0:18:37.62:0,38,476	0/1:44,0:44:99:141,0,1121	0/0:17,0:16:15.03:0,15,287	0/1:21,0:19:25.76:26,0,213	0/0:20,0:20:32.09:0,32,388	0/0:24,0:24:42.08:0,42,663	0/0:15,0:15:30.06:0,30,483	0/0:15,0:14:18.05:0,18,333	0/0:25,0:25:38.03:0,38,447	0/1:3,16:21:64.20:375,0,64	0/1:21,0:21:59.66:60,0,358	1/1:17,0:17:47.72:708,48,0	0/1:26,0:25:99:118,0,435	0/0:26,0:25:43.16:0,43,412	0/0:26,0:23:1.57:0,2,367	0/0:20,0:20:27.33:0,27,413	0/0:19,0:19:27.72:0,28,468	0/1:23,0:23:3.73:4,0,109	0/1:21,0:20:12.13:12,0,305	0/0:27,0:26:37.37:0,37,733	0/0:20,0:20:16.04:0,16,443	0/0:8,0:8:8.57:0,9,279
chr10	16759866	.	T	TG	8494.82	PASS	AB=1.000;AC=28;AF=0.500;AN=56;BaseQRankSum=0.049;DP=669;FS=2.571;HRun=1;HaplotypeScore=77.6880;InbreedingCoeff=0.6828;MQ=72.77;MQ0=0;MQRankSum=0.092;QD=20.62;ReadPosRankSum=3.781;VQSLOD=5.2697;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,129,1638	1/1:0,12:12:23.96:317,24,0	0/0:23,0:15:8.19:0,8,212	0/0:16,0:10:3.95:0,4,120	1/1:0,30:29:80.65:972,81,0	0/0:29,0:29:87.16:0,87,996	0/0:15,0:15:45.14:0,45,569	0/1:31,0:31:75.70:86,0,76	0/0:16,0:16:48.12:0,48,580	1/1:1,27:29:80.73:1001,81,0	1/1:1,30:31:89.84:1190,90,0	0/0:16,0:16:45.13:0,45,557	0/0:18,0:18:54.13:0,54,645	0/0:21,0:21:63.18:0,63,786	1/1:2,26:28:60.20:889,60,0	1/1:26,0:26:51.70:194,52,0	1/1:0,34:34:72.24:1076,72,0	1/1:33,0:33:17.99:180,18,0	0/1:33,0:33:62.93:63,0,134	0/1:18,0:18:53.10:76,0,53	0/1:10,0:10:24.11:38,0,24	0/0:19,0:19:54.05:0,54,650	0/0:23,0:23:69.21:0,69,864	0/0:16,0:16:42.11:0,42,515	1/1:27,0:27:31.27:167,31,0	1/1:1,27:28:81.22:1132,81,0	1/1:1,29:29:51.17:754,51,0	1/1:0,12:12:24.08:358,24,0
chr10	16759867	.	G	GT	7780.01	PASS	AB=1.000;AC=33;AF=0.589;AN=56;BaseQRankSum=0.781;DP=668;FS=0.683;HRun=8;HaplotypeScore=78.8658;InbreedingCoeff=0.8922;MQ=73.96;MQ0=0;MQRankSum=-0.638;QD=18.39;ReadPosRankSum=1.894;VQSLOD=4.7879;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,123,1108	1/1:12,0:12:20.67:133,21,0	0/0:26,0:17:0.06:0,0,141	0/1:15,0:10:11.50:11,0,42	1/1:29,0:28:40.04:364,40,0	0/0:29,0:29:59.97:0,60,536	0/0:16,0:16:42.01:0,42,384	1/1:6,25:31:75.15:813,75,0	0/0:16,0:16:39:0,39,349	1/1:28,0:28:32.78:328,33,0	1/1:29,1:30:77.07:542,77,0	0/0:17,0:17:39:0,39,353	0/0:18,0:18:42.02:0,42,384	0/0:21,0:21:57:0,57,514	1/1:28,0:28:39:358,39,0	1/1:0,25:25:60.18:693,60,0	1/1:34,0:34:70.85:449,71,0	1/1:2,30:32:78.23:899,78,0	1/1:8,25:33:75.07:786,75,0	1/1:3,15:18:42.09:471,42,0	1/1:2,8:10:21.06:242,21,0	0/0:19,0:19:51.01:0,51,461	0/0:24,0:24:62.99:0,63,567	0/0:16,0:16:38.98:0,39,347	1/1:1,26:27:66.20:762,66,0	1/1:28,0:28:49.74:433,50,0	1/1:30,0:29:34.20:327,34,0	1/1:12,0:12:23.80:168,24,0
chr10	16761942	.	GA	G	5337.27	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=12.207;DP=671;FS=15.009;HRun=9;HaplotypeScore=71.9382;InbreedingCoeff=0.9937;MQ=75.13;MQ0=0;MQRankSum=0.180;QD=19.69;ReadPosRankSum=6.402;VQSLOD=3.7890;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,39:45:98.07:888,98,0	0/0:8,0:8:21.06:0,21,242	0/0:25,1:21:22.23:0,22,409	0/0:27,0:24:42.07:0,42,443	0/0:25,0:25:63.14:0,63,693	1/1:5,22:27:51.01:458,51,0	1/1:4,19:23:39.02:357,39,0	0/0:31,0:31:78.13:0,78,829	1/1:0,17:17:42.02:384,42,0	0/0:25,0:25:63.17:0,63,705	0/0:16,0:16:42.10:0,42,471	1/1:3,34:37:83.91:767,84,0	1/1:0,19:19:44.39:410,44,0	1/1:2,14:16:33.02:302,33,0	0/0:27,0:27:72.18:0,72,808	0/0:19,0:19:51.14:0,51,579	0/0:28,0:28:75.16:0,75,821	0/0:17,0:17:51.15:0,51,588	0/0:28,0:28:78.08:0,78,818	0/0:7,0:7:21.03:0,21,216	0/0:25,0:25:72.20:0,72,817	1/1:6,31:37:87.01:784,87,0	1/1:2,23:25:57.03:520,57,0	1/1:2,23:25:51.02:466,51,0	0/0:27,0:27:75.19:0,75,831	0/0:26,1:28:53.60:0,54,834	0/0:30,0:30:84.21:0,84,946	0/0:6,0:6:12:0,12,116
chr10	16762535	.	T	TAAA	10981.35	PASS	AB=0.797;AC=48;AF=0.857;AN=56;BaseQRankSum=1.873;DP=578;FS=0.000;HRun=12;HaplotypeScore=106.9113;InbreedingCoeff=0.6709;MQ=67.95;MQ0=5;MQRankSum=-1.955;QD=21.41;ReadPosRankSum=-2.527;VQSLOD=3.2775;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:32:64.03:494,64,0	1/1:2,10:16:36.01:556,36,0	0/0:17,0:10:15.25:0,15,148	0/1:14,0:13:10.09:10,0,74	1/1:8,24:33:83.87:1154,84,0	1/1:1,0:9:11.95:92,12,0	1/1:0,0:10:20.92:160,21,0	1/1:18,0:24:35.96:371,36,0	1/1:3,2:20:37.15:324,37,0	1/1:10,12:26:47.19:644,47,0	1/1:7,11:20:36.04:522,36,0	1/1:1,0:16:32.42:264,32,0	0/1:6,1:19:5.96:191,0,6	1/1:1,1:13:20.94:192,21,0	1/1:7,12:19:18.02:296,18,0	0/0:20,0:22:34.15:0,34,557	1/1:5,12:21:37.35:601,37,0	0/0:24,0:26:58.46:0,58,646	1/1:13,1:16:41.69:478,42,0	1/1:1,1:20:50.98:594,51,0	1/1:3,1:14:15.01:191,15,0	1/1:5,0:17:0.82:192,1,0	1/1:5,1:27:16.34:353,16,0	1/1:2,0:7:14.94:114,15,0	1/1:5,6:32:54.12:782,54,0	1/1:7,27:39:87.11:1205,87,0	1/1:5,23:32:48.14:807,48,0	1/1:3,5:12:27.05:393,27,0
chr10	16763027	.	AG	A	1890.29	PASS	AB=0.924;AC=28;AF=0.500;AN=56;BaseQRankSum=-8.011;DP=538;FS=22.086;HRun=11;HaplotypeScore=89.2652;InbreedingCoeff=0.2059;MQ=82.14;MQ0=8;MQRankSum=-0.344;QD=4.62;ReadPosRankSum=0.572;VQSLOD=0.2991;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,17:24:25.27:300,25,0	0/0:8,0:8:11.61:0,12,88	0/1:55,1:25:0.98:1,0,109	0/1:48,1:27:72.47:72,0,84	0/0:27,0:27:32.76:0,33,249	0/1:5,9:14:15.52:109,0,16	1/1:3,16:19:35.90:292,36,0	0/1:29,0:29:24.31:79,0,24	1/1:11,9:20:18.86:169,19,0	0/0:0,0:9:8.87:0,9,57	0/0:19,0:19:23.85:0,24,182	1/1:6,13:19:11.85:187,12,0	1/1:5,3:8:17.35:122,17,0	0/1:4,6:10:18.59:19,0,25	0/0:16,0:16:20.90:0,21,161	0/1:22,0:22:48.66:49,0,54	0/0:13,0:13:26.82:0,27,193	0/1:14,0:14:16.11:16,0,40	0/1:18,0:19:3.24:3,0,64	0/1:18,1:19:21.49:21,0,74	0/1:16,1:17:54.93:75,0,55	1/1:5,8:13:26.53:196,27,0	1/1:11,7:18:17.95:141,18,0	1/1:3,11:14:23.95:197,24,0	0/1:6,0:6:16.86:29,0,17	0/0:12,0:12:17.52:0,18,116	0/1:19,0:19:2.49:2,0,91	0/0:24,0:25:46.96:0,47,333
chr10	16764249	.	G	GACTTA	169.47	PASS	AB=0.714;AC=1;AF=0.018;AN=56;BaseQRankSum=3.321;DP=477;FS=2.431;HRun=0;HaplotypeScore=94.1568;InbreedingCoeff=-0.0245;MQ=76.91;MQ0=0;MQRankSum=1.660;QD=16.95;ReadPosRankSum=-1.782;VQSLOD=2.9208;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:69.21:0,69,1493	0/0:9,0:9:24.08:0,24,559	0/1:6,4:9:99:244,0,100	0/0:10,0:10:20.49:0,20,306	0/0:9,0:9:27.04:0,27,510	0/0:10,0:10:30.10:0,30,699	0/0:27,0:27:81.28:0,81,1861	0/0:22,0:22:66.18:0,66,1360	0/0:20,0:20:57.18:0,57,1278	0/0:16,0:16:45.15:0,45,1006	0/0:9,0:9:24.08:0,24,549	0/0:18,0:18:54.19:0,54,1207	0/0:10,0:10:27.09:0,27,624	0/0:21,0:21:63.22:0,63,1438	0/0:17,0:17:51.18:0,51,1188	0/0:20,0:20:60.21:0,60,1394	0/0:30,0:30:87.30:0,87,1983	0/0:25,0:25:75.26:0,75,1689	0/0:13,0:13:30.07:0,30,627	0/0:2,0:2:6.02:0,6,140	0/0:65,0:65:99:0,190,4338	0/0:18,0:18:51.17:0,51,1156	0/0:9,0:9:27.09:0,27,622	0/0:22,0:22:66.23:0,66,1493	0/0:10,0:10:25.89:0,26,582	0/0:16,0:16:48.16:0,48,1112	0/0:12,0:11:30.09:0,30,653	0/0:3,0:3:9.03:0,9,208
chr10	16764991	.	TACAG	T	14345.49	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=20.699;DP=724;FS=8.935;HRun=0;HaplotypeScore=220.3104;InbreedingCoeff=0.9971;MQ=87.93;MQ0=0;MQRankSum=-21.419;QD=39.09;ReadPosRankSum=-0.466;VQSLOD=3.4823;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:56:99:0,166,4726	1/1:1,6:7:21.07:328,21,0	0/0:40,0:40:99:0,117,3091	0/0:25,0:25:75.26:0,75,1997	1/1:0,35:36:72:896,72,0	0/0:18,0:18:54.18:0,54,1475	0/0:34,0:34:99:0,102,2894	1/1:1,18:19:54.18:859,54,0	0/0:30,0:30:90.31:0,90,2566	1/1:4,26:31:93.31:1446,93,0	1/1:0,14:14:32.85:402,33,0	0/0:30,0:30:90.31:0,90,2567	0/0:21,0:21:63.22:0,63,1809	0/0:26,0:26:78.27:0,78,2203	1/1:2,39:41:99:1739,123,0	1/1:1,44:50:53.80:1865,54,0	1/1:0,19:19:48.63:737,49,0	1/1:0,13:13:39.13:596,39,0	1/1:0,19:22:65.96:1020,66,0	1/1:2,11:13:36.11:495,36,0	1/1:5,14:20:35.71:367,36,0	0/0:23,0:23:69.24:0,69,1935	0/0:24,0:24:72.25:0,72,2040	0/0:30,0:30:90.31:0,90,2601	1/1:2,21:23:66.05:979,66,0	1/1:3,26:29:87.29:1351,87,0	1/1:0,24:25:72.07:1036,72,0	1/1:0,5:5:15.05:231,15,0
chr10	16764996	.	TG	T	4119.95	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=21.820;DP=717;FS=1.927;HRun=1;HaplotypeScore=215.0307;InbreedingCoeff=0.9959;MQ=87.21;MQ0=0;MQRankSum=-20.674;QD=11.32;ReadPosRankSum=-0.215;VQSLOD=1.9717;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,163,2564	1/1:6,1:7:19.21:82,19,0	0/0:39,0:39:99:0,117,1802	0/0:24,0:24:69.22:0,69,1052	1/1:37,0:37:70.47:403,70,0	0/0:17,0:17:51.17:0,51,815	0/0:33,0:33:99:0,99,1577	1/1:18,0:18:46.75:201,47,0	0/0:31,0:31:93.32:0,93,1482	1/1:28,3:31:78.98:348,79,0	1/1:16,0:16:28.08:141,28,0	0/0:29,0:29:87.30:0,87,1390	0/0:21,0:21:63.21:0,63,1007	0/0:24,0:24:72.25:0,72,1151	1/1:39,0:39:99:469,100,0	1/1:47,0:46:60.52:490,61,0	1/1:19,1:20:46.88:207,47,0	1/1:14,0:14:32.87:139,33,0	1/1:20,0:20:32.43:197,32,0	1/1:13,0:13:33.93:190,34,0	1/1:18,0:18:32.04:199,32,0	0/0:24,0:24:72.23:0,72,1123	0/0:24,0:24:72.25:0,72,1151	0/0:33,0:33:99:0,99,1574	1/1:21,4:25:60.93:282,61,0	1/1:27,3:30:80.21:389,80,0	1/1:24,0:24:64.13:325,64,0	1/1:5,0:5:13.72:58,14,0
chr10	16764997	.	GTA	G	9722.56	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=21.303;DP=721;FS=4.449;HRun=0;HaplotypeScore=208.6997;InbreedingCoeff=0.9971;MQ=87.51;MQ0=0;MQRankSum=-20.662;QD=26.56;ReadPosRankSum=-1.182;VQSLOD=4.7822;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,163,3233	1/1:1,6:7:21.06:230,21,0	0/0:40,0:40:99:0,115,2153	0/0:25,0:24:72.17:0,72,1288	1/1:6,30:36:79.68:673,80,0	0/0:17,0:17:51.18:0,51,1030	0/0:33,0:33:99:0,99,1928	1/1:0,18:18:51.15:577,51,0	0/0:31,0:31:93.32:0,93,1856	1/1:5,26:31:92.66:970,93,0	1/1:2,14:16:31.64:284,32,0	0/0:29,0:29:87.30:0,87,1759	0/0:22,0:22:66.21:0,66,1295	0/0:24,0:24:72.25:0,72,1461	1/1:1,39:40:99:1098,114,0	1/1:3,44:47:73.66:1188,74,0	1/1:1,19:20:56.50:556,57,0	1/1:0,13:15:36.56:393,37,0	1/1:1,19:20:58.72:664,59,0	1/1:2,11:13:38.75:344,39,0	1/1:1,14:18:30.26:251,30,0	0/0:23,0:23:69.24:0,69,1386	0/0:24,0:24:72.25:0,72,1444	0/0:33,0:33:99:0,99,1955	1/1:4,21:25:65.32:677,65,0	1/1:4,27:31:90.20:973,90,0	1/1:0,24:24:68.18:685,68,0	1/1:0,5:5:15.04:161,15,0
chr10	16765505	.	TAATC	T	18356.43	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=14.302;DP=565;FS=3.733;HRun=0;HaplotypeScore=107.7123;InbreedingCoeff=0.9992;MQ=85.37;MQ0=0;MQRankSum=-5.879;QD=54.80;ReadPosRankSum=1.944;VQSLOD=6.2919;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:81.28:0,81,2326	1/1:0,9:9:27.09:566,27,0	0/0:21,0:21:63.17:0,63,1591	0/0:19,0:19:56.59:0,57,1404	1/1:0,29:29:84.07:1546,84,0	0/0:15,0:15:45.15:0,45,1208	0/0:19,0:19:57.18:0,57,1534	1/1:0,20:20:60.15:1093,60,0	0/0:15,0:15:45.15:0,45,1302	1/1:0,23:23:66.20:1343,66,0	1/1:0,17:17:42.06:825,42,0	0/0:19,0:19:57.20:0,57,1636	0/0:22,0:22:63.15:0,63,1557	0/0:23,0:23:63.22:0,63,1805	1/1:0,25:25:75.26:1571,75,0	1/1:0,24:24:63.08:1320,63,0	1/1:0,25:25:66.23:1383,66,0	1/1:0,21:21:51.18:1069,51,0	1/1:0,10:10:30.06:516,30,0	1/1:0,23:23:69.12:1332,69,0	1/1:0,11:11:20.99:354,21,0	0/0:13,0:13:39.13:0,39,1129	0/0:22,0:22:66.23:0,66,1869	0/0:14,0:14:42.14:0,42,1198	1/1:0,24:24:63.17:1267,63,0	1/1:0,37:37:99:2225,108,0	1/1:0,20:20:57.20:1193,57,0	1/1:0,17:17:36.12:754,36,0
chr10	16766164	.	C	CTT	10417.24	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=-9.389;DP=616;FS=0.352;HRun=10;HaplotypeScore=80.9588;InbreedingCoeff=0.9831;MQ=73.94;MQ0=2;MQRankSum=-2.097;QD=27.85;ReadPosRankSum=-2.992;VQSLOD=4.3804;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:69.07:0,69,694	1/1:0,8:7:15.05:224,15,0	0/0:14,0:15:16.27:0,16,187	0/0:10,0:8:7.47:0,7,110	1/1:3,20:28:62.45:745,62,0	0/0:26,0:27:50.80:0,51,571	0/0:15,0:15:36.07:0,36,366	1/1:7,23:35:77.19:1007,77,0	0/0:25,0:25:69.07:0,69,683	1/1:5,20:26:55.37:747,55,0	1/1:5,11:16:30:396,30,0	0/0:27,0:27:62.13:0,62,616	0/0:22,0:23:35.72:0,36,418	0/0:24,0:24:57.10:0,57,573	1/1:2,21:22:48.16:715,48,0	1/1:3,29:33:71.73:1038,72,0	1/1:4,21:28:56.16:778,56,0	1/1:4,14:18:42.14:610,42,0	1/1:9,11:25:18.79:530,19,0	1/1:5,21:26:59.95:712,60,0	1/1:2,12:14:27.09:402,27,0	0/0:12,0:12:23.98:0,24,244	0/0:18,0:18:33:0,33,329	0/0:16,0:16:42.06:0,42,420	1/1:1,19:19:32.91:467,33,0	1/1:4,27:32:77.69:1050,78,0	1/1:8,14:26:45.14:638,45,0	1/1:0,13:14:24.08:357,24,0
chr10	16766376	.	C	CT	2613.15	PASS	AB=0.746;AC=25;AF=0.446;AN=56;BaseQRankSum=-6.062;DP=520;FS=10.594;HRun=14;HaplotypeScore=74.9426;InbreedingCoeff=0.3580;MQ=59.14;MQ0=6;MQRankSum=0.341;QD=8.17;ReadPosRankSum=-1.800;VQSLOD=1.3891;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,1:31:47.69:0,48,275	1/1:2,4:7:14.84:119,15,0	0/0:13,0:12:0.88:0,1,22	0/0:6,0:3:2.95:0,3,19	0/1:11,12:26:21.12:212,0,21	0/0:14,1:18:1.11:0,1,119	0/1:15,1:15:3.67:4,0,98	1/1:19,9:28:11.19:217,11,0	0/0:14,0:13:20.57:0,21,134	1/1:9,7:17:3.34:107,3,0	1/1:7,10:18:23.53:215,24,0	0/0:19,0:20:19.43:0,19,121	0/0:10,2:13:7.14:0,7,150	0/0:13,0:13:14.61:0,15,95	1/1:7,11:17:26.74:223,27,0	0/0:4,0:17:25.77:0,26,96	1/1:9,18:29:7.59:296,8,0	0/0:3,0:16:24.43:0,24,71	0/1:16,3:18:57.02:134,0,57	1/1:8,15:23:35.83:298,36,0	1/1:11,11:20:18:158,18,0	0/0:12,1:15:1.36:0,1,120	0/0:22,0:22:27.79:0,28,166	0/1:14,3:19:39.44:39,0,145	0/1:8,8:16:30.65:85,0,31	0/1:13,18:31:4.71:434,0,5	0/1:9,11:19:42.59:152,0,43	1/1:3,4:6:12:105,12,0
chr10	16767029	.	C	CAT	18855.62	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=-18.073;DP=734;FS=6.091;HRun=0;HaplotypeScore=78.2791;InbreedingCoeff=0.9998;MQ=80.87;MQ0=3;MQRankSum=-2.712;QD=49.10;ReadPosRankSum=1.114;VQSLOD=5.8148;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,132,1922	1/1:0,13:13:36.12:656,36,0	0/0:18,0:18:32.46:0,32,635	0/0:28,0:28:51.21:0,51,858	1/1:2,20:22:54.19:1004,54,0	0/0:31,0:31:87.29:0,87,1281	0/0:30,0:30:87.29:0,87,1275	1/1:2,38:41:99:2148,120,0	0/0:33,0:33:96.32:0,96,1410	1/1:1,18:19:48.16:899,48,0	1/1:2,25:27:63.22:1179,63,0	0/0:39,0:39:99:0,114,1679	0/0:22,0:22:66.22:0,66,967	0/0:36,0:35:99:0,99,1450	1/1:0,29:29:78.27:1460,78,0	1/1:2,20:22:60.21:1124,60,0	1/1:1,25:27:60.21:1122,60,0	1/1:1,23:24:60.20:1104,60,0	1/1:0,16:16:48.15:856,48,0	1/1:0,12:12:30.10:544,30,0	1/1:0,42:42:99:2135,114,0	0/0:27,0:27:78.26:0,78,1148	0/0:12,0:12:30.09:0,30,422	0/0:28,0:27:84.28:0,84,1232	1/1:0,22:22:60.21:1122,60,0	1/1:1,24:25:75.22:1369,75,0	1/1:2,26:28:75.26:1403,75,0	1/1:1,13:13:39.13:730,39,0
chr10	16767291	.	GCTGA	G	15030.76	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=14.671;DP=589;FS=18.042;HRun=0;HaplotypeScore=105.6580;InbreedingCoeff=0.9984;MQ=85.28;MQ0=1;MQRankSum=-7.205;QD=47.57;ReadPosRankSum=5.126;VQSLOD=4.2080;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,102,2738	1/1:0,8:8:18.06:348,18,0	0/0:27,0:27:61.09:0,61,2027	0/0:18,0:18:45.15:0,45,1230	1/1:0,18:18:48.16:929,48,0	0/0:24,0:24:69.24:0,69,1847	0/0:22,0:22:63.22:0,63,1709	1/1:3,23:26:72.20:1266,72,0	0/0:18,0:18:54.19:0,54,1477	1/1:2,20:22:57.18:1038,57,0	1/1:1,15:16:33.11:639,33,0	0/0:27,0:27:78.27:0,78,2098	0/0:19,0:19:57.20:0,57,1549	0/0:27,0:27:75.26:0,75,2036	1/1:3,31:33:81.28:1548,81,0	1/1:1,18:19:48.14:930,48,0	1/1:2,22:23:54.18:1027,54,0	1/1:1,17:18:42.14:814,42,0	1/1:0,15:15:45.14:839,45,0	1/1:0,22:22:51.17:988,51,0	1/1:0,10:10:24.08:444,24,0	0/0:29,0:29:87.30:0,87,2369	0/0:14,0:14:39.13:0,39,1057	0/0:10,0:10:27.09:0,27,739	1/1:0,18:17:51.17:987,51,0	1/1:3,31:34:93.32:1783,93,0	1/1:0,17:17:42.14:813,42,0	1/1:1,14:15:33.11:639,33,0
chr10	16769431	.	T	TA	1152.20	PASS	AB=0.868;AC=26;AF=0.765;AN=34;BaseQRankSum=-3.004;DP=267;FS=3.514;HRun=1;HaplotypeScore=13.1068;InbreedingCoeff=0.2693;MQ=28.59;MQ0=49;MQRankSum=-2.231;QD=6.70;ReadPosRankSum=0.744;VQSLOD=0.7265;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:9,0:4:12.04:12,0,12	1/1:2,7:4:6.02:95,6,0	0/0:18,0:4:12.02:0,12,150	0/0:17,0:2:6.02:0,6,84	1/1:2,13:6:3.01:47,3,0	./.	./.	./.	./.	0/1:9,5:6:15.42:83,0,15	1/1:3,6:2:3.01:47,3,0	1/1:6,0:3:2.94:18,3,0	./.	./.	1/1:3,11:6:3.01:47,3,0	./.	./.	1/1:6,2:4:5.99:69,6,0	1/1:4,2:1:3:25,3,0	1/1:6,11:8:8.98:114,9,0	0/0:7,6:3:2.84:0,3,14	./.	./.	./.	1/1:1,11:9:11.40:151,11,0	1/1:4,13:5:15.05:239,15,0	1/1:8,10:4:3.01:47,3,0	1/1:8,10:12:8.79:274,9,0
chr10	16770852	.	T	TC	4286.81	PASS	AB=1.000;AC=26;AF=0.722;AN=36;BaseQRankSum=-7.257;DP=352;FS=0.519;HRun=8;HaplotypeScore=70.3486;InbreedingCoeff=0.4119;MQ=67.79;MQ0=3;MQRankSum=-0.219;QD=14.99;ReadPosRankSum=1.018;VQSLOD=4.8152;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	1/1:0,8:8:21.06:242,21,0	0/0:16,0:16:20.98:0,21,186	0/1:17,0:15:8.45:8,0,174	1/1:2,14:16:2.59:267,3,0	./.	./.	0/1:21,0:18:11.28:81,0,11	./.	1/1:7,14:21:39.09:432,39,0	1/1:4,15:19:27.08:311,27,0	./.	./.	./.	1/1:4,18:22:42.12:483,42,0	0/0:23,0:23:56.76:0,57,495	1/1:3,32:35:84.03:933,84,0	0/0:27,0:27:77.45:0,77,681	1/1:16,0:15:6.59:65,7,0	0/1:23,0:23:50.84:87,0,51	0/1:22,0:22:20:104,0,20	./.	./.	./.	1/1:18,0:18:33.57:130,34,0	1/1:5,18:23:54.06:573,54,0	1/1:2,18:20:38.92:433,39,0	1/1:0,4:4:12.04:138,12,0
chr10	16770860	.	C	CT	3139.15	PASS	AB=1.000;AC=26;AF=0.722;AN=36;BaseQRankSum=-4.742;DP=360;FS=2.662;HRun=7;HaplotypeScore=74.3694;InbreedingCoeff=-0.0783;MQ=61.92;MQ0=7;MQRankSum=2.116;QD=9.10;ReadPosRankSum=3.139;VQSLOD=1.0661;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	0/1:10,0:10:21.42:66,0,21	0/0:14,0:12:18:0,18,167	0/1:16,0:14:1.57:2,0,183	0/1:19,0:18:21:66,0,21	./.	./.	1/1:7,17:18:38.99:401,39,0	./.	0/1:21,0:21:38.49:38,0,119	0/1:18,0:18:35.91:56,0,36	./.	./.	./.	1/1:20,0:20:4.20:116,4,0	0/1:25,0:25:64.44:81,0,64	1/1:38,0:37:10.92:225,11,0	0/1:31,0:31:44.91:45,0,45	1/1:3,13:15:36.06:403,36,0	1/1:5,17:22:42:452,42,0	1/1:4,17:21:48.15:573,48,0	./.	./.	./.	1/1:1,14:15:39.12:465,39,0	0/1:22,0:22:6.51:95,0,7	1/1:21,0:21:1.28:134,1,0	1/1:5,0:5:11.14:50,11,0
chr10	16771656	.	G	GA	1905.46	PASS	AB=0.731;AC=27;AF=0.587;AN=46;BaseQRankSum=-4.309;DP=438;FS=0.000;HRun=10;HaplotypeScore=34.9490;InbreedingCoeff=0.1846;MQ=44.97;MQ0=66;MQRankSum=1.589;QD=5.72;ReadPosRankSum=-0.394;VQSLOD=-0.2362;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:9,9:7:3:0,3,25	./.	0/0:26,0:8:0.14:0,0,73	0/1:24,0:6:2.24:21,0,2	1/1:5,16:14:6.02:64,6,0	0/0:10,3:6:3:0,3,25	0/0:4,6:1:3:0,3,25	0/1:9,2:3:15.62:55,0,16	./.	1/1:8,13:14:23.99:232,24,0	1/1:8,19:15:12.03:128,12,0	./.	0/1:6,7:2:0:0,0,0	./.	0/1:3,8:8:15.62:55,0,16	0/1:3,12:13:6.60:142,0,7	1/1:8,26:27:8.45:294,8,0	1/1:7,22:25:29.64:318,30,0	1/1:7,7:7:10.57:97,11,0	0/1:9,7:10:12.58:76,0,13	1/1:2,14:15:9.02:96,9,0	0/0:4,0:1:3:0,3,25	0/0:2,0:2:5.99:0,6,49	./.	1/1:0,11:11:9.02:96,9,0	0/1:13,6:8:12.82:66,0,13	1/1:13,18:22:2.32:210,2,0	1/1:7,5:7:9.02:96,9,0
chr10	16771673	.	A	AAG	285.13	PASS	AB=0.870;AC=13;AF=0.295;AN=44;BaseQRankSum=1.772;DP=428;FS=15.367;HRun=0;HaplotypeScore=35.8500;InbreedingCoeff=0.4427;MQ=32.04;MQ0=88;MQRankSum=-0.466;QD=2.59;ReadPosRankSum=-1.163;VQSLOD=-0.7462;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:14,5:7:3.01:57,3,0	0/0:8,0:2:3.01:0,3,38	./.	0/1:19,0:2:0.98:1,0,4	0/0:21,0:14:9.03:0,9,137	1/1:6,5:6:3.01:57,3,0	1/1:7,3:1:3.01:57,3,0	0/0:23,0:5:15.05:0,15,229	./.	0/0:19,1:10:20.90:0,21,320	0/0:23,2:14:9:0,9,113	./.	./.	./.	0/0:17,0:14:27.06:0,27,379	0/0:13,0:10:18.03:0,18,251	0/0:34,0:24:36.08:0,36,502	0/0:28,0:23:29.93:0,30,436	0/0:19,0:11:14.98:0,15,229	0/1:12,3:9:44.79:45,0,99	0/0:16,0:13:9.03:0,9,138	1/1:3,2:1:3.01:57,3,0	1/1:0,2:2:6.02:113,6,0	./.	0/0:13,0:13:15.01:0,15,202	0/0:20,0:7:15.01:0,15,203	0/1:22,6:19:32.69:33,0,275	0/0:8,2:6:9.03:0,9,138
chr10	16771967	.	TCACACA	T	260.68	PASS	AB=0.935;AC=8;AF=0.308;AN=26;BaseQRankSum=1.645;DP=329;FS=3.909;HRun=0;HaplotypeScore=53.6504;InbreedingCoeff=0.3408;MQ=31.46;MQ0=25;MQRankSum=-1.804;QD=3.03;ReadPosRankSum=0.265;VQSLOD=1.2859;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	1/1:3,0:3:3.01:39,3,0	./.	./.	./.	0/0:3,0:3:6.02:0,6,189	0/0:4,0:2:5.98:0,6,59	./.	./.	./.	0/1:7,0:3:0:0,0,0	./.	./.	0/0:1,0:1:3.01:0,3,85	1/1:15,4:20:15.05:265,15,0	0/0:17,0:17:15.05:0,15,481	0/1:23,4:19:51.27:51,0,182	0/0:20,0:17:13.29:0,13,357	0/0:12,0:9:6.02:0,6,169	./.	1/1:25,0:18:0.46:1,0,0	./.	./.	./.	./.	./.	0/0:18,0:14:2.12:0,2,95	0/0:5,0:3:3.01:0,3,96
chr10	16772381	.	GT	G	2847.43	PASS	AB=0.618;AC=21;AF=0.438;AN=48;BaseQRankSum=2.042;DP=637;FS=11.436;HRun=2;HaplotypeScore=42.1921;InbreedingCoeff=0.5889;MQ=18.38;MQ0=221;MQRankSum=0.211;QD=11.30;ReadPosRankSum=1.225;VQSLOD=0.4555;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:16:3.01:0,3,45	1/1:0,6:5:6.02:78,6,0	./.	./.	1/1:2,18:16:27.09:348,27,0	0/0:16,0:8:3.01:0,3,45	0/0:30,0:11:12.04:0,12,179	./.	0/0:23,0:9:2.84:0,3,44	1/1:3,27:21:54.18:700,54,0	1/1:0,19:18:27.09:350,27,0	0/0:27,0:9:9.03:0,9,135	0/0:18,0:10:5.81:0,6,89	0/0:22,0:6:3.01:0,3,45	1/1:10,27:9:5.85:78,6,0	0/0:29,0:3:2.80:0,3,45	1/1:24,11:3:3.01:39,3,0	0/0:23,0:2:3.01:0,3,45	0/0:15,6:2:3.01:0,3,45	1/1:6,20:17:33.11:427,33,0	./.	0/0:16,0:14:27.05:0,27,379	0/0:12,0:11:14.89:0,15,224	0/0:37,0:10:2.84:0,3,45	1/1:2,14:10:18.06:233,18,0	0/1:13,21:11:56.79:317,0,57	1/1:5,13:6:12.04:155,12,0	1/1:0,11:10:24.04:292,24,0
chr10	16774991	.	T	TCGA	919.22	PASS	AB=0.536;AC=22;AF=0.524;AN=42;BaseQRankSum=-0.046;DP=133;FS=1.154;HRun=0;HaplotypeScore=24.6940;InbreedingCoeff=0.6272;MQ=37.77;MQ0=21;MQRankSum=0.798;QD=14.59;ReadPosRankSum=0.743;VQSLOD=3.0934;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:8:17.86:0,18,237	0/1:1,2:4:0.06:0,0,0	./.	./.	1/1:4,0:4:5.81:89,6,0	0/0:7,0:6:2.68:0,3,26	0/0:11,0:6:6.17:0,6,79	./.	0/0:3,0:3:6:0,6,101	1/1:1,4:5:8.32:109,8,0	./.	./.	0/0:9,0:7:11.97:0,12,142	0/0:3,0:3:6.01:0,6,66	1/1:4,0:4:6:69,6,0	1/1:0,4:7:8.99:132,9,0	1/1:8,1:8:12:143,12,0	1/1:6,0:4:9.03:126,9,0	1/1:0,3:3:5.98:72,6,0	./.	1/1:8,0:6:12.51:179,13,0	0/0:6,0:6:2.55:0,3,37	0/0:3,0:2:6.02:0,6,87	0/0:8,0:8:8.99:0,9,95	0/1:0,2:3:0:0,0,0	1/1:6,0:4:8.99:106,9,0	1/1:3,0:3:3.01:41,3,0	./.
chr10	16776347	.	GTTT	G	8287.97	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=3.333;DP=546;FS=20.663;HRun=13;HaplotypeScore=130.7576;InbreedingCoeff=0.9504;MQ=83.24;MQ0=6;MQRankSum=-4.483;QD=27.08;ReadPosRankSum=3.216;VQSLOD=2.2405;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:24:58.04:0,58,502	1/1:1,3:4:9.02:109,9,0	0/0:54,0:31:44.96:0,45,580	0/0:48,0:29:26.11:0,26,358	1/1:2,21:23:57.13:690,57,0	0/0:6,0:16:32.38:0,32,238	0/0:5,0:14:28.15:0,28,212	1/1:6,14:20:39.01:458,39,0	0/0:0,0:9:23.91:0,24,183	1/1:4,16:20:48.12:583,48,0	1/1:2,17:19:48.11:581,48,0	0/0:9,0:18:35.88:0,36,342	0/0:4,0:11:29.89:0,30,235	0/0:0,0:3:8.97:0,9,69	1/1:3,15:18:42.10:508,42,0	1/1:5,11:16:5.09:303,5,0	1/1:5,24:29:60.57:730,61,0	1/1:3,10:14:30:344,30,0	1/1:1,14:14:39.11:474,39,0	1/1:11,26:37:84.06:986,84,0	1/1:1,16:17:36.09:437,36,0	0/0:4,0:8:6.01:0,6,101	0/0:9,0:22:44.88:0,45,417	0/0:3,0:8:21.54:0,22,146	1/1:5,17:22:51.12:619,51,0	1/1:0,14:14:42.09:493,42,0	1/1:8,16:23:45:535,45,0	1/1:0,13:13:36.09:438,36,0
chr10	16776487	.	T	TAAC	20200.84	PASS	AB=0.583;AC=47;AF=0.839;AN=56;BaseQRankSum=-5.490;DP=610;FS=18.417;HRun=0;HaplotypeScore=90.9004;InbreedingCoeff=0.8335;MQ=69.09;MQ0=0;MQRankSum=-1.332;QD=38.26;ReadPosRankSum=1.927;VQSLOD=4.3307;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,28:32:57.11:1115,57,0	1/1:0,7:9:21.07:406,21,0	0/0:18,0:18:22.87:0,23,272	0/0:15,0:14:6.11:0,6,217	1/1:8,16:25:39.05:729,39,0	1/1:6,18:24:42.14:851,42,0	1/1:3,7:10:15.05:306,15,0	1/1:18,10:28:30.10:577,30,0	1/1:1,18:20:51.18:1031,51,0	1/1:5,16:21:48.16:960,48,0	1/1:1,14:15:29.99:541,30,0	1/1:7,19:27:48.16:963,48,0	1/1:3,13:16:27.09:551,27,0	1/1:0,21:22:60.21:1224,60,0	1/1:1,13:14:36.12:711,36,0	0/0:28,0:28:63.19:0,63,875	1/1:6,25:31:60.21:1218,60,0	0/0:21,0:21:42.73:0,43,611	1/1:3,20:23:60.09:918,60,0	1/1:7,19:26:51.09:972,51,0	1/1:8,31:40:63.22:1286,63,0	1/1:1,12:13:27.09:527,27,0	1/1:2,17:19:48.16:955,48,0	1/1:4,24:29:66.23:1347,66,0	0/1:4,10:14:19.28:405,0,19	1/1:4,20:28:72.19:1258,72,0	1/1:7,21:28:42.14:857,42,0	1/1:5,8:13:24.08:490,24,0
chr10	16777609	.	C	CAGAG	3980.97	PASS	AB=0.944;AC=45;AF=0.865;AN=52;BaseQRankSum=-5.337;DP=668;FS=11.642;HRun=0;HaplotypeScore=187.2834;InbreedingCoeff=0.5224;MQ=66.83;MQ0=7;MQRankSum=4.112;QD=7.28;ReadPosRankSum=-2.576;VQSLOD=1.6700;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:25:12.03:155,12,0	1/1:8,0:8:6.02:125,6,0	./.	./.	0/1:24,6:30:0:0,0,0	1/1:31,0:31:9.03:181,9,0	1/1:17,0:17:12.04:231,12,0	1/1:29,0:29:37.06:553,37,0	1/1:28,0:28:11.81:166,12,0	1/1:26,0:26:12.03:145,12,0	1/1:11,0:11:3:25,3,0	1/1:29,0:32:5.94:101,6,0	1/1:29,0:29:15.01:239,15,0	1/1:14,0:16:3.01:53,3,0	1/1:28,1:29:14.94:285,15,0	0/0:31,0:30:26.68:0,27,220	1/1:20,0:20:9.03:134,9,0	0/0:17,0:17:11.79:0,12,111	1/1:22,0:22:12.02:189,12,0	1/1:23,0:23:9.03:165,9,0	1/1:17,0:16:3.01:64,3,0	1/1:19,0:18:3.01:40,3,0	0/1:20,0:20:0.22:0,0,0	1/1:17,0:17:9.01:121,9,0	1/1:25,0:24:8.98:120,9,0	1/1:23,0:23:24.08:441,24,0	1/1:32,0:30:30.05:450,30,0	0/1:15,0:15:0:0,0,0
chr10	16777640	.	AGAGAGAGAGAGTGT	A	3818.95	PASS	AB=0.931;AC=8;AF=0.143;AN=56;BaseQRankSum=1.700;DP=727;FS=6.297;HRun=0;HaplotypeScore=273.9410;InbreedingCoeff=0.0982;MQ=57.84;MQ0=7;MQRankSum=0.149;QD=20.64;ReadPosRankSum=-2.900;VQSLOD=1.0486;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:33.11:0,33,1741	0/0:14,0:14:10.27:0,10,423	0/0:22,0:12:25.75:0,26,621	0/0:41,0:25:50.75:0,51,1305	0/0:31,0:31:17.95:0,18,669	0/0:36,0:36:63.20:0,63,1884	0/0:22,0:22:51.16:0,51,1356	0/1:46,0:44:99:919,0,1879	0/0:24,0:24:23.94:0,24,1028	0/0:26,0:26:15.31:0,15,1372	0/0:25,0:25:2.51:0,3,348	0/0:34,0:32:38.74:0,39,1000	0/0:26,0:26:54.18:0,54,1907	0/0:26,0:26:35.30:0,35,878	0/0:33,0:32:36.72:0,37,1434	1/1:10,16:26:30.10:1230,30,0	0/0:24,0:23:15.49:0,15,731	0/1:5,12:15:20.88:529,0,21	0/1:24,0:23:99:396,0,980	0/1:22,0:22:99:168,0,719	0/1:26,0:25:99:354,0,503	0/0:27,0:26:51.03:0,51,1112	0/0:24,0:24:35.29:0,35,783	0/0:20,0:20:21.07:0,21,1031	0/1:24,0:23:99:223,0,605	0/0:21,0:21:43.19:0,43,2046	0/0:36,0:35:50.90:0,51,2452	0/0:10,0:10:24.97:0,25,917
chr10	16777650	.	AGTGT	A	3888.18	PASS	AB=1.000;AC=18;AF=0.321;AN=56;BaseQRankSum=1.268;DP=715;FS=4.921;HRun=0;HaplotypeScore=180.8665;InbreedingCoeff=0.4263;MQ=62.88;MQ0=5;MQRankSum=-0.604;QD=11.21;ReadPosRankSum=-0.446;VQSLOD=3.1377;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:36.12:0,36,757	0/0:15,0:15:3.41:0,3,19	0/0:24,0:16:33.16:0,33,812	0/0:36,0:27:56.52:0,57,1036	0/1:31,0:31:2.70:3,0,8	0/0:36,0:36:63.05:0,63,1100	0/0:22,0:22:49.87:0,50,773	1/1:14,27:42:86.51:1346,87,0	0/0:23,0:23:24.05:0,24,501	0/1:23,0:23:8.05:8,0,75	0/1:23,0:23:4.39:4,0,12	0/0:32,0:30:41.84:0,42,628	0/0:27,0:27:53.13:0,53,804	0/0:23,0:23:32.53:0,33,538	0/1:35,0:34:6.51:7,0,214	1/1:19,0:18:30.09:379,30,0	0/1:27,0:26:11.44:11,0,47	1/1:14,0:12:12.04:160,12,0	1/1:24,0:23:11.32:635,11,0	0/1:18,0:18:3.71:230,0,4	1/1:28,0:29:39.10:729,39,0	0/0:27,0:26:57.19:0,57,960	0/0:26,0:26:36.02:0,36,599	0/0:21,0:21:24.01:0,24,442	0/1:25,0:24:10.28:375,0,10	0/0:25,0:25:12.97:0,13,232	0/1:36,0:35:0.71:1,0,232	0/0:12,0:12:1.74:0,2,57
chr10	16778038	.	G	GT	944.96	PASS	AB=0.869;AC=42;AF=0.750;AN=56;BaseQRankSum=2.257;DP=289;FS=13.484;HRun=17;HaplotypeScore=56.1144;InbreedingCoeff=0.3824;MQ=69.85;MQ0=2;MQRankSum=-2.300;QD=4.20;ReadPosRankSum=0.616;VQSLOD=-0.1473;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,6:14:7.31:40,7,0	1/1:3,0:3:2.68:11,3,0	0/0:12,0:7:5.40:0,5,26	0/0:15,0:10:4.79:0,5,24	1/1:18,0:18:19.19:86,19,0	1/1:6,0:6:2.96:19,3,0	0/1:8,4:13:4.46:115,0,4	0/0:15,0:18:3.65:0,4,10	0/1:5,2:7:3.63:52,0,4	1/1:14,0:14:21.59:91,22,0	1/1:10,0:10:8.33:39,8,0	1/1:3,3:6:8.97:68,9,0	1/1:7,0:9:2.84:15,3,0	1/1:7,0:7:5.72:29,6,0	1/1:14,0:14:30.11:134,30,0	1/1:6,0:6:7.40:33,7,0	1/1:19,0:19:24.30:103,24,0	1/1:2,0:4:3.31:15,3,0	0/0:8,0:10:8.75:0,9,32	0/1:8,0:10:6.19:6,0,17	0/0:7,0:7:2.79:0,3,15	0/1:9,0:9:1.77:2,0,9	1/1:5,0:5:2.94:18,3,0	1/1:4,2:6:3.46:23,3,0	1/1:4,0:6:0.47:1,0,0	1/1:12,0:12:13.50:58,13,0	1/1:16,0:15:19.69:89,20,0	1/1:10,0:10:10.91:48,11,0
chr10	16778043	.	T	TTG	2341.37	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-5.491;DP=259;FS=8.988;HRun=0;HaplotypeScore=36.1220;InbreedingCoeff=0.8563;MQ=68.14;MQ0=2;MQRankSum=1.295;QD=22.95;ReadPosRankSum=6.291;VQSLOD=2.5550;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:19.54:0,20,113	1/1:0,2:2:3.01:44,3,0	0/0:11,0:6:17.73:0,18,163	0/0:14,0:9:21.14:0,21,153	1/1:1,16:17:44.38:422,44,0	0/0:3,0:3:8.90:0,9,60	0/0:12,0:11:14.67:0,15,210	0/0:18,0:17:36.43:0,36,317	0/0:6,0:6:14.86:0,15,125	1/1:0,12:12:36.05:443,36,0	1/1:0,7:7:11.92:136,12,0	0/0:5,0:5:14.76:0,15,98	0/0:9,0:9:8.42:0,8,151	0/0:5,0:5:14.91:0,15,114	1/1:2,11:13:34.63:447,35,0	0/0:6,0:6:6.78:0,7,37	1/1:0,18:19:27.09:395,27,0	0/0:4,0:4:5.70:0,6,31	0/0:11,0:10:30.02:0,30,299	0/0:9,0:9:25.49:0,25,227	0/0:5,0:5:9.01:0,9,96	0/0:10,0:9:20.83:0,21,179	0/0:5,0:5:11.92:0,12,89	0/0:5,0:5:5.57:0,6,44	0/0:5,0:5:8.91:0,9,64	1/1:2,9:11:17.05:289,17,0	1/1:2,12:13:20.73:257,21,0	1/1:2,5:7:11.38:112,11,0
chr10	16778044	.	T	TG	947.86	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=2.185;DP=247;FS=4.901;HRun=0;HaplotypeScore=35.4869;InbreedingCoeff=0.8546;MQ=68.54;MQ0=2;MQRankSum=0.696;QD=10.30;ReadPosRankSum=5.776;VQSLOD=2.6055;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:20.60:0,21,127	1/1:1,0:1:2.84:14,3,0	0/0:11,0:6:17.73:0,18,154	0/0:14,0:9:21.52:0,22,144	1/1:15,1:16:43.35:240,43,0	0/0:3,0:3:8.91:0,9,61	0/0:12,0:11:20.57:0,21,178	0/0:17,0:16:36.41:0,36,306	0/0:6,0:6:9.09:0,9,87	1/1:10,0:10:28.04:152,28,0	1/1:4,0:4:11.61:75,12,0	0/0:5,0:5:8.16:0,8,55	0/0:9,0:9:23.75:0,24,182	0/0:5,0:5:14.91:0,15,115	1/1:12,0:12:30.97:154,31,0	0/0:6,0:6:11.67:0,12,67	1/1:18,0:18:25.38:121,25,0	0/0:4,0:4:8.27:0,8,48	0/0:11,0:10:30:0,30,280	0/0:9,0:9:25.74:0,26,214	0/0:4,0:4:9.01:0,9,94	0/0:10,0:9:20.87:0,21,180	0/0:5,0:5:11.92:0,12,89	0/0:5,0:5:2.81:0,3,26	0/0:5,0:5:8.92:0,9,65	1/1:11,0:11:11.37:167,11,0	1/1:13,1:13:20.64:129,21,0	1/1:4,2:6:11.70:97,12,0
chr10	16780180	.	T	TC	10184.44	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=3.486;DP=374;FS=1.410;HRun=1;HaplotypeScore=81.6249;InbreedingCoeff=0.6727;MQ=32.57;MQ0=28;MQRankSum=-1.003;QD=30.04;ReadPosRankSum=2.777;VQSLOD=4.7221;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,15:13:12.04:176,12,0	1/1:0,2:2:6.02:91,6,0	0/0:18,0:5:12.04:0,12,161	0/0:17,0:5:12.04:0,12,168	1/1:1,10:11:14.67:168,15,0	1/1:0,22:18:32.83:505,33,0	1/1:1,7:7:9.03:141,9,0	1/1:0,23:23:69.19:1056,69,0	1/1:1,14:11:23.79:371,24,0	1/1:0,7:7:21.07:327,21,0	1/1:1,7:8:8.64:127,9,0	1/1:1,8:7:15.05:234,15,0	1/1:1,18:14:30.10:425,30,0	1/1:1,20:16:30.10:456,30,0	1/1:1,22:14:36.12:549,36,0	1/1:0,26:26:69.24:1100,69,0	1/1:2,4:3:6.02:94,6,0	1/1:0,17:17:30.10:479,30,0	1/1:1,15:15:45.15:718,45,0	1/1:0,17:17:48.16:726,48,0	1/1:1,5:6:12.04:192,12,0	1/1:0,3:2:6.02:81,6,0	1/1:0,6:3:5.87:90,6,0	1/1:0,8:8:8.96:142,9,0	1/1:0,17:17:48.16:728,48,0	1/1:0,10:9:21.07:321,21,0	1/1:1,20:19:48.16:751,48,0	1/1:0,3:3:9.03:138,9,0
chr10	16780185	.	C	CT	4262.67	PASS	AB=0.583;AC=37;AF=0.661;AN=56;BaseQRankSum=10.348;DP=354;FS=1.634;HRun=0;HaplotypeScore=94.3776;InbreedingCoeff=0.7862;MQ=35.68;MQ0=23;MQRankSum=-6.116;QD=21.97;ReadPosRankSum=3.919;VQSLOD=6.6700;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:4,10:12:11.55:336,0,12	1/1:0,2:2:6.02:81,6,0	0/0:20,0:8:21.07:0,21,293	0/0:17,0:7:21.05:0,21,273	1/1:1,7:8:8.82:119,9,0	1/1:2,19:17:36.09:476,36,0	1/1:0,3:3:9.03:125,9,0	0/0:22,0:22:66.14:0,66,756	1/1:1,13:11:24.08:332,24,0	1/1:0,4:4:12.04:162,12,0	1/1:3,6:9:15.05:208,15,0	1/1:1,7:6:12.04:166,12,0	1/1:4,15:14:24.08:326,24,0	1/1:0,18:14:24.08:334,24,0	1/1:3,21:15:39.13:532,39,0	0/0:26,0:26:66.65:0,67,835	1/1:3,2:2:3.01:42,3,0	0/0:17,0:17:33.11:0,33,447	0/0:16,0:15:43.37:0,43,516	0/0:18,0:18:40.33:0,40,469	0/0:6,0:6:18.06:0,18,251	1/1:2,0:2:3.01:36,3,0	1/1:2,6:5:9.03:122,9,0	1/1:1,5:6:3.01:32,3,0	0/0:18,0:18:39.56:0,40,464	1/1:1,9:9:18.06:247,18,0	1/1:1,15:14:33.11:463,33,0	1/1:0,3:3:9.03:123,9,0
chr10	16780749	.	TA	T	2312.37	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-1.413;DP=485;FS=4.131;HRun=2;HaplotypeScore=94.3965;InbreedingCoeff=0.8970;MQ=57.37;MQ0=5;MQRankSum=3.119;QD=21.81;ReadPosRankSum=0.910;VQSLOD=3.5453;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:30:75.62:0,76,451	0/0:5,0:5:11.43:0,11,68	0/0:23,0:6:2.92:0,3,27	0/0:15,0:8:0.48:0,0,36	0/0:17,0:17:46.47:0,46,309	0/0:18,0:18:46.22:0,46,304	0/0:15,0:15:42.72:0,43,261	1/1:18,5:21:56.87:499,57,0	0/0:12,0:12:27.50:0,27,163	0/0:18,0:18:47.37:0,47,366	0/0:12,0:12:29.31:0,29,205	0/0:17,0:17:49.72:0,50,310	0/0:10,0:10:20.39:0,20,130	0/0:13,0:13:28.40:0,28,171	0/0:13,0:12:29:0,29,182	0/0:17,0:16:40.54:0,41,244	0/0:21,0:21:44:0,44,294	0/0:17,0:16:36.07:0,36,241	1/1:3,11:14:36.76:327,37,0	1/1:9,23:33:95.74:983,96,0	1/1:2,16:18:30.03:322,30,0	0/0:18,0:18:43.96:0,44,326	0/0:17,0:16:40.36:0,40,289	0/0:25,0:25:71.96:0,72,417	1/1:0,18:18:29.96:354,30,0	0/0:17,0:16:42.63:0,43,312	0/0:10,0:10:20.28:0,20,126	0/0:16,0:16:38.25:0,38,277
chr10	16782111	.	CTT	C	1821.26	PASS	AB=0.697;AC=22;AF=0.393;AN=56;BaseQRankSum=1.094;DP=536;FS=7.849;HRun=17;HaplotypeScore=69.4068;InbreedingCoeff=0.5508;MQ=69.70;MQ0=3;MQRankSum=0.528;QD=6.05;ReadPosRankSum=6.243;VQSLOD=-0.6703;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:22:23.91:0,24,203	1/1:1,6:8:5.83:86,6,0	0/0:29,0:11:12.74:0,13,82	0/0:25,0:17:7.23:0,7,86	1/1:9,18:29:34.71:311,35,0	0/0:8,0:17:15.03:0,15,159	0/0:3,0:11:9.02:0,9,95	0/1:21,4:33:3.16:3,0,166	0/0:9,0:15:42.68:0,43,419	1/1:12,14:27:34.45:306,34,0	1/1:6,11:19:32.01:235,32,0	0/0:7,0:12:14.99:0,15,137	0/0:7,0:16:17.53:0,18,168	0/0:7,0:16:14.88:0,15,116	1/1:1,13:14:23.90:190,24,0	0/0:5,0:12:23.37:0,23,214	1/1:4,14:19:23.68:229,24,0	0/0:10,0:23:23.41:0,23,194	0/1:20,2:24:34.62:35,0,138	0/1:13,2:30:16.31:16,0,117	0/1:5,0:8:0.75:15,0,1	0/0:8,0:8:15.05:0,15,179	0/0:12,0:20:36.44:0,36,344	0/0:2,0:8:9.01:0,9,89	0/1:14,1:29:24.92:25,0,158	1/1:12,20:34:43.13:331,43,0	0/1:5,7:14:18.60:116,0,19	1/1:1,7:10:11.58:122,12,0
chr10	16783294	.	TCCTTATATCGG	T	10956.74	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=15.405;DP=586;FS=0.810;HRun=0;HaplotypeScore=190.5330;InbreedingCoeff=0.9802;MQ=94.16;MQ0=0;MQRankSum=-14.690;QD=74.03;ReadPosRankSum=6.246;VQSLOD=4.2459;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,120,6336	1/1:0,8:8:21.07:734,21,0	0/0:28,0:28:80.61:0,81,3557	0/0:30,0:30:81.23:0,81,3589	1/1:2,21:23:63.05:1793,63,0	0/0:22,0:22:57.20:0,57,3114	0/0:15,0:15:45.15:0,45,2451	0/0:37,0:37:99:0,108,4994	0/0:22,0:22:66.23:0,66,3671	1/1:1,16:17:45.15:1573,45,0	1/1:3,8:10:15.01:439,15,0	0/0:15,0:15:39.13:0,39,2221	0/0:18,0:18:51.17:0,51,2585	0/0:15,0:15:42.13:0,42,2047	1/1:2,17:19:45.15:1573,45,0	0/0:23,0:23:69.24:0,69,3739	1/1:5,15:20:30.10:1049,30,0	0/0:24,0:24:69.24:0,69,3440	0/0:28,0:28:72.24:0,72,3605	0/0:18,0:18:54.19:0,54,2842	0/0:21,0:21:60.17:0,60,2774	0/0:27,0:27:78.27:0,78,3872	0/0:18,0:18:48.16:0,48,2711	0/0:18,0:18:51.18:0,51,2673	0/0:15,0:15:45.15:0,45,2505	1/1:5,18:23:57.17:1907,57,0	1/1:3,20:23:48.16:1678,48,0	1/1:0,4:4:6.02:210,6,0
chr10	16783591	.	G	GA	3455.32	PASS	AB=0.625;AC=17;AF=0.304;AN=56;BaseQRankSum=-9.467;DP=575;FS=5.520;HRun=11;HaplotypeScore=66.0748;InbreedingCoeff=0.8410;MQ=68.35;MQ0=0;MQRankSum=-1.204;QD=16.86;ReadPosRankSum=-1.321;VQSLOD=4.1251;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:77.64:0,78,603	1/1:1,6:7:15.03:152,15,0	0/0:11,0:11:10.99:0,11,74	0/0:5,0:6:4.96:0,5,29	1/1:8,20:29:8.12:430,8,0	0/0:20,0:20:41.81:0,42,325	0/0:20,1:21:23.35:0,23,364	0/0:18,0:18:32.82:0,33,255	0/0:14,0:14:35.86:0,36,279	1/1:8,17:26:5.07:400,5,0	0/1:8,12:20:33.36:227,0,33	0/0:25,0:25:62.74:0,63,486	0/0:17,0:17:44.80:0,45,348	0/0:17,0:17:41.81:0,42,325	1/1:6,23:30:64.21:626,64,0	0/0:19,1:20:8.36:0,8,248	1/1:5,25:30:63.13:640,63,0	0/0:17,0:18:43.80:0,44,326	0/0:22,0:22:44.79:0,45,347	0/0:17,0:17:44.79:0,45,348	0/0:18,0:18:38.84:0,39,302	0/0:24,0:24:41.76:0,42,325	0/0:20,0:20:47.79:0,48,371	0/0:28,0:28:65.71:0,66,511	0/0:18,0:18:47.76:0,48,368	1/1:15,14:29:27.82:449,28,0	1/1:5,20:25:38.86:395,39,0	1/1:4,4:9:14.86:136,15,0
chr10	16785332	.	T	TA	3007.15	PASS	AC=20;AF=0.370;AN=54;BaseQRankSum=-8.867;DP=364;FS=0.970;HRun=9;HaplotypeScore=48.8984;InbreedingCoeff=0.8686;MQ=69.01;MQ0=4;MQRankSum=0.957;QD=20.18;ReadPosRankSum=2.580;VQSLOD=4.0247;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:61.06:0,61,522	1/1:1,2:3:2.84:33,3,0	1/1:19,0:7:3.41:19,3,0	0/0:12,0:7:5.64:0,6,31	1/1:1,15:16:36.03:383,36,0	0/0:15,0:15:44.85:0,45,376	0/0:10,0:10:26.99:0,27,234	0/0:31,0:31:63.44:0,63,514	0/0:13,0:13:26.99:0,27,234	1/1:3,16:19:48.09:505,48,0	1/1:1,7:8:14.86:122,15,0	0/0:4,0:4:11.99:0,12,101	0/0:9,0:9:17.98:0,18,156	0/0:8,0:8:14.97:0,15,125	1/1:2,9:11:24.06:265,24,0	0/0:10,0:10:26.98:0,27,230	1/1:3,26:28:69.19:763,69,0	0/0:23,0:23:58.78:0,59,495	0/0:18,0:18:45.88:0,46,305	0/0:5,0:5:14.87:0,15,119	0/0:10,0:10:17.17:0,17,123	./.	0/0:3,0:3:2.98:0,3,23	0/0:3,0:3:6:0,6,52	0/0:13,0:13:29.18:0,29,228	1/1:3,14:17:42.01:409,42,0	1/1:3,19:22:53.60:579,54,0	1/1:1,4:5:12.03:133,12,0
chr10	16787645	.	TG	T	4316.40	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=2.019;DP=627;FS=0.786;HRun=2;HaplotypeScore=100.1386;InbreedingCoeff=0.9996;MQ=84.39;MQ0=0;MQRankSum=-2.241;QD=34.81;ReadPosRankSum=-2.965;VQSLOD=3.8592;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,120,1730	0/0:12,0:12:33.11:0,33,492	0/0:20,0:19:49.11:0,49,705	0/0:28,0:28:75.16:0,75,1038	0/0:23,0:23:63.20:0,63,922	0/0:12,0:12:36.11:0,36,520	0/0:16,0:16:48.14:0,48,679	1/1:1,38:39:99:1442,114,0	0/0:21,0:21:63.19:0,63,905	0/0:31,0:31:93.30:0,93,1369	0/0:16,0:16:42.14:0,42,628	0/0:16,0:16:48.15:0,48,699	0/0:23,0:23:69.23:0,69,1030	0/0:23,0:23:63.21:0,63,943	0/0:27,0:27:81.27:0,81,1196	0/0:18,0:18:54.18:0,54,808	0/0:26,0:26:75.21:0,75,1099	0/0:22,0:22:66.22:0,66,982	1/1:0,15:15:45.15:584,45,0	1/1:0,15:15:33.11:425,33,0	1/1:1,31:32:76.15:1009,76,0	0/0:22,0:22:60.20:0,60,898	0/0:20,0:20:57.19:0,57,846	0/0:22,0:21:66.22:0,66,989	1/1:0,23:22:66.21:856,66,0	0/0:29,0:29:84.28:0,84,1249	0/0:27,0:27:78.26:0,78,1169	0/0:9,0:9:27.09:0,27,405
chr10	16787882	.	AAG	A	1642.83	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.361;DP=588;FS=0.000;HRun=0;HaplotypeScore=68.5971;InbreedingCoeff=0.9985;MQ=77.98;MQ0=1;MQRankSum=0.274;QD=32.21;ReadPosRankSum=1.573;VQSLOD=5.6458;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:96.28:0,96,1667	0/0:9,0:9:24.08:0,24,421	0/0:15,0:15:42.10:0,42,677	0/0:14,0:14:33.02:0,33,516	0/0:27,0:27:75.23:0,75,1302	0/0:19,0:19:57.20:0,57,1025	0/0:14,0:14:33.11:0,33,594	0/0:30,0:30:69.15:0,69,1128	0/0:21,0:20:57.20:0,57,1025	0/0:23,0:23:66.23:0,66,1181	0/0:17,0:17:48.16:0,48,859	0/0:23,0:23:60.19:0,60,1062	0/0:19,0:19:48.16:0,48,850	0/0:15,0:15:39.13:0,39,702	0/0:21,0:21:51.13:0,51,801	1/1:1,20:21:51.17:714,51,0	0/0:26,0:26:75.19:0,75,1302	1/1:0,30:29:75.25:1050,75,0	0/0:27,0:26:78.22:0,78,1307	0/0:21,0:21:63.22:0,63,1134	0/0:18,0:18:54.19:0,54,972	0/0:16,0:16:45.15:0,45,802	0/0:19,0:19:54.18:0,54,958	0/0:19,0:19:48.16:0,48,860	0/0:21,0:21:60.19:0,60,1052	0/0:29,0:29:75.24:0,75,1320	0/0:29,0:29:87.30:0,87,1555	0/0:11,0:11:33.11:0,33,585
chr10	16788005	.	C	CTTTT	7452.79	PASS	AB=0.583;AC=47;AF=0.839;AN=56;BaseQRankSum=1.368;DP=517;FS=4.017;HRun=14;HaplotypeScore=120.5485;InbreedingCoeff=0.7152;MQ=58.60;MQ0=2;MQRankSum=-5.691;QD=16.79;ReadPosRankSum=-3.008;VQSLOD=2.3972;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,16:36:44.82:773,45,0	1/1:9,0:11:16.30:271,16,0	0/0:14,0:8:11.47:0,11,108	0/0:14,0:12:5.56:0,6,41	1/1:24,0:28:39.96:502,40,0	1/1:6,8:19:18.06:300,18,0	1/1:13,5:20:41.05:585,41,0	1/1:36,0:36:32.78:299,33,0	1/1:6,8:16:15:264,15,0	1/1:21,0:21:38.46:509,38,0	1/1:8,0:10:11.05:143,11,0	1/1:13,10:24:21.54:360,22,0	1/1:5,8:14:6.02:130,6,0	1/1:8,1:10:14.96:173,15,0	1/1:14,0:17:29.31:471,29,0	0/0:3,0:17:29.46:0,29,229	1/1:18,0:19:30.01:489,30,0	0/0:11,0:28:63.70:0,64,440	1/1:27,0:27:35.32:386,35,0	1/1:15,0:14:21.95:258,22,0	1/1:8,0:8:4.57:67,5,0	1/1:12,6:19:22.40:228,22,0	1/1:13,0:17:23.97:260,24,0	1/1:4,6:11:3.01:65,3,0	1/1:15,0:14:13.60:229,14,0	1/1:18,0:21:28.34:293,28,0	1/1:19,0:22:16.27:300,16,0	0/1:2,0:7:12.28:97,0,12
chr10	16788016	.	T	TTTTTC	5988.19	PASS	AB=1.000;AC=32;AF=0.571;AN=56;BaseQRankSum=3.695;DP=516;FS=11.396;HRun=0;HaplotypeScore=109.7222;InbreedingCoeff=0.0722;MQ=45.15;MQ0=3;MQRankSum=-2.792;QD=14.36;ReadPosRankSum=2.887;VQSLOD=3.2877;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:31,0:31:77.82:193,0,78	1/1:2,10:13:17.73:408,18,0	0/0:10,0:4:11.95:0,12,156	0/0:7,0:5:5.94:0,6,59	1/1:6,19:27:40.89:790,41,0	0/1:20,0:20:31.36:31,0,106	0/1:21,0:21:14.16:153,0,14	0/1:29,0:29:68.74:184,0,69	0/1:17,0:17:31.32:31,0,113	1/1:4,14:25:53.43:990,53,0	1/1:4,8:14:16.56:275,17,0	0/1:23,0:23:40.89:41,0,113	0/1:12,0:12:16.47:47,0,16	1/1:9,0:9:9.30:73,9,0	1/1:7,13:23:29.18:710,29,0	0/0:18,0:18:39:0,39,457	1/1:8,15:24:20.09:724,20,0	0/0:29,0:29:84.96:0,85,923	0/0:27,0:26:29.64:0,30,326	0/1:15,0:14:31.12:31,0,122	0/0:8,0:8:10.87:0,11,60	0/1:14,0:14:34.40:34,0,98	0/1:15,0:15:13.50:13,0,56	0/1:9,0:9:18.69:19,0,20	0/1:15,0:14:15.14:15,0,111	1/1:12,2:25:31.61:556,32,0	1/1:9,12:26:26.63:480,27,0	1/1:9,0:9:1.47:189,1,0
chr10	16788438	.	G	GAA	7419.37	PASS	AB=0.923;AC=29;AF=0.518;AN=56;BaseQRankSum=-8.987;DP=570;FS=25.194;HRun=10;HaplotypeScore=78.1243;InbreedingCoeff=0.9249;MQ=58.36;MQ0=11;MQRankSum=0.170;QD=26.50;ReadPosRankSum=-3.113;VQSLOD=2.2211;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:48:99:0,116,1105	1/1:0,6:6:18.06:268,18,0	0/0:10,0:8:14.87:0,15,142	0/1:11,0:10:12.02:12,0,129	1/1:7,9:19:26.53:320,27,0	0/0:20,0:20:56.85:0,57,553	0/0:24,0:22:54.08:0,54,549	1/1:16,18:35:59.69:856,60,0	0/0:17,0:17:36.05:0,36,366	1/1:4,20:25:66.13:915,66,0	1/1:6,12:17:38.92:517,39,0	0/0:20,0:19:48.10:0,48,488	0/0:23,0:23:39.50:0,39,523	0/0:24,0:24:69.15:0,69,701	1/1:6,9:16:30.09:431,30,0	0/0:21,0:20:48.09:0,48,488	1/1:4,17:20:44.59:609,45,0	0/0:35,0:33:80.88:0,81,800	1/1:3,14:20:51.15:696,51,0	1/1:4,4:9:14.87:146,15,0	1/1:4,12:17:39.09:556,39,0	0/0:7,0:7:16.34:0,16,180	0/0:12,0:12:30.04:0,30,305	0/0:25,0:25:65.86:0,66,652	1/1:4,11:14:27.05:377,27,0	1/1:9,16:27:50.65:699,51,0	1/1:4,16:20:39.13:582,39,0	1/1:5,10:15:32.58:435,33,0
chr10	16789197	.	G	GCC	10150.80	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=4.660;DP=568;FS=3.410;HRun=7;HaplotypeScore=86.4349;InbreedingCoeff=0.9843;MQ=81.15;MQ0=0;MQRankSum=-2.441;QD=40.12;ReadPosRankSum=-0.112;VQSLOD=4.2710;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,123,1433	1/1:5,6:12:27.09:406,27,0	0/0:27,0:25:40.82:0,41,613	0/0:26,0:25:48.54:0,49,537	1/1:5,19:24:63.21:1017,63,0	0/0:33,0:33:87.18:0,87,969	0/0:23,0:23:63.16:0,63,723	1/1:5,22:27:63.21:1023,63,0	0/0:21,0:21:60.13:0,60,668	1/1:3,12:15:36.12:590,36,0	1/1:1,10:11:30.10:492,30,0	0/0:19,0:19:57.17:0,57,664	0/0:18,0:18:48.14:0,48,559	0/0:20,0:20:51.14:0,51,594	1/1:2,12:14:39.13:632,39,0	0/0:21,0:21:51.13:0,51,593	1/1:5,18:23:63.19:986,63,0	0/0:8,0:8:17.95:0,18,210	1/1:6,13:19:42.14:670,42,0	1/1:2,9:13:35.61:539,36,0	1/1:9,22:31:72.05:1152,72,0	0/0:18,0:18:48.14:0,48,559	0/0:13,0:13:33.08:0,33,372	0/0:25,0:25:66.18:0,66,767	1/1:6,13:19:51.17:831,51,0	1/1:6,18:24:66.21:1029,66,0	1/1:1,16:17:42.14:685,42,0	1/1:0,4:4:6.02:98,6,0
chr10	16789285	.	C	CT	14218.96	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-12.701;DP=673;FS=1.597;HRun=0;HaplotypeScore=62.7930;InbreedingCoeff=0.9999;MQ=84.69;MQ0=0;MQRankSum=-1.620;QD=44.57;ReadPosRankSum=1.558;VQSLOD=5.2184;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,144,1949	1/1:1,10:11:30.09:456,30,0	0/0:19,0:19:36.54:0,37,693	0/0:25,0:25:69.21:0,69,949	1/1:0,29:29:81.28:1289,81,0	0/0:19,0:19:57.19:0,57,793	0/0:29,0:29:84.05:0,84,1083	1/1:0,30:30:90.24:1346,90,0	0/0:23,0:23:69.23:0,69,963	1/1:0,23:23:69.22:1076,69,0	1/1:0,23:23:63.21:1006,63,0	0/0:20,0:20:60.17:0,60,803	0/0:16,0:16:48.16:0,48,670	0/0:24,0:24:72.21:0,72,984	1/1:4,22:26:72.23:1119,72,0	0/0:23,0:23:69.20:0,69,942	1/1:3,37:40:99:1686,108,0	0/0:21,0:21:60.11:0,60,804	1/1:0,17:17:48.14:741,48,0	1/1:0,21:21:63.21:994,63,0	1/1:1,32:33:96.31:1510,96,0	0/0:25,0:25:75.24:0,75,1031	0/0:28,0:28:75.23:0,75,1014	0/0:34,0:34:99:0,102,1402	1/1:0,12:12:36.12:562,36,0	1/1:1,23:24:66.23:1055,66,0	1/1:3,12:16:48.13:709,48,0	1/1:0,14:14:42.14:671,42,0
chr10	16789537	.	CG	C	6537.50	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=13.675;DP=633;FS=9.124;HRun=2;HaplotypeScore=62.4890;InbreedingCoeff=0.9948;MQ=84.61;MQ0=0;MQRankSum=-1.718;QD=35.15;ReadPosRankSum=2.357;VQSLOD=4.9422;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,123,1833	1/1:0,10:10:27.09:350,27,0	0/0:20,0:20:57.19:0,57,829	0/0:18,0:18:50.48:0,50,748	1/1:1,31:32:90.25:1122,90,0	0/0:19,0:19:57.11:0,57,825	0/0:18,0:18:54.17:0,54,786	0/0:31,0:31:90.29:0,90,1289	0/0:20,0:20:60.17:0,60,872	1/1:0,24:24:72.22:919,72,0	1/1:0,9:9:27.08:342,27,0	0/0:22,0:22:66.12:0,66,935	0/0:29,0:29:81.26:0,81,1191	0/0:23,0:23:69.22:0,69,1004	1/1:1,19:20:54.17:691,54,0	0/0:34,0:34:99:0,102,1461	1/1:0,23:23:60.20:778,60,0	0/0:15,0:15:45.14:0,45,653	0/0:13,0:13:30.08:0,30,425	0/0:17,0:17:51.17:0,51,762	0/0:44,0:44:99:0,132,1916	0/0:23,0:23:60.19:0,60,876	0/0:17,0:17:51.16:0,51,724	0/0:27,0:27:81.27:0,81,1211	0/0:15,0:15:42.14:0,42,624	1/1:0,27:27:81.26:1050,81,0	1/1:0,36:36:87.28:1129,87,0	1/1:0,5:5:12.04:156,12,0
chr10	16789647	.	G	GTT	4219.01	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=-5.195;DP=690;FS=5.965;HRun=12;HaplotypeScore=114.7572;InbreedingCoeff=0.9146;MQ=70.21;MQ0=3;MQRankSum=1.791;QD=17.43;ReadPosRankSum=0.182;VQSLOD=3.7479;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:40:99:0,100,857	1/1:2,10:12:21.07:295,21,0	0/0:29,0:12:19.55:0,20,119	0/1:25,0:21:2.85:3,0,171	1/1:8,19:31:41.43:591,41,0	0/0:31,0:31:68.96:0,69,630	0/0:22,0:23:39.72:0,40,373	0/0:31,0:34:41.74:0,42,440	0/0:14,0:14:32.85:0,33,286	1/1:6,16:29:53.81:570,54,0	1/1:3,10:13:30.05:386,30,0	0/0:27,0:27:47.82:0,48,485	0/0:25,0:27:53.55:0,54,463	0/0:19,0:20:40.89:0,41,408	1/1:7,16:23:2.33:333,2,0	0/0:4,0:25:62.69:0,63,277	1/1:2,25:31:62.69:836,63,0	0/0:7,0:20:35.21:0,35,151	0/0:21,0:21:35.83:0,36,314	0/0:21,0:21:54.87:0,55,496	0/0:21,0:21:50.84:0,51,460	0/0:13,0:13:32.98:0,33,305	0/0:31,0:32:68.93:0,69,633	0/0:29,0:29:77.72:0,78,691	0/0:20,0:20:44.90:0,45,415	1/1:12,3:33:57.10:611,57,0	1/1:12,2:30:32.80:342,33,0	1/1:9,1:13:27.13:252,27,0
chr10	16789683	.	GAGCC	G	6019.81	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=7.373;DP=514;FS=5.016;HRun=0;HaplotypeScore=101.8304;InbreedingCoeff=0.9965;MQ=85.29;MQ0=0;MQRankSum=-8.669;QD=47.78;ReadPosRankSum=-0.516;VQSLOD=5.2264;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:93.19:0,93,2208	0/0:8,0:8:15.05:0,15,402	0/0:18,0:18:48.14:0,48,1167	0/0:20,0:19:36.25:0,36,860	0/0:12,0:12:27.09:0,27,729	0/0:21,0:21:63.21:0,63,1646	0/0:22,0:22:60.21:0,60,1605	1/1:0,12:12:33.10:573,33,0	0/0:17,0:17:51.14:0,51,1256	0/0:21,0:21:60.20:0,60,1566	0/0:12,0:12:33.11:0,33,859	0/0:19,0:19:54.19:0,54,1455	0/0:22,0:22:66.23:0,66,1751	0/0:20,0:20:60.16:0,60,1545	0/0:16,0:16:39.13:0,39,1030	1/1:1,16:17:51.17:956,51,0	0/0:24,0:24:57.20:0,57,1537	1/1:1,23:24:63.22:1176,63,0	1/1:1,15:16:42.13:754,42,0	1/1:1,18:19:45.15:854,45,0	1/1:1,26:27:57.14:1082,57,0	0/0:11,0:11:29.87:0,30,809	0/0:19,0:19:51.18:0,51,1376	0/0:31,0:31:87.30:0,87,2348	1/1:0,11:11:33.11:626,33,0	0/0:15,0:15:42.14:0,42,1087	0/0:18,0:18:48.16:0,48,1255	0/0:10,0:10:30.10:0,30,808
chr10	16790855	.	CA	C	9461.76	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=13.545;DP=619;FS=0.000;HRun=7;HaplotypeScore=72.6445;InbreedingCoeff=0.9993;MQ=65.99;MQ0=0;MQRankSum=-3.599;QD=26.07;ReadPosRankSum=1.950;VQSLOD=5.5165;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:90.75:0,91,1119	1/1:1,12:13:33.07:337,33,0	0/0:15,0:15:36.01:0,36,425	0/0:22,0:21:24.32:0,24,431	1/1:2,28:30:75.16:763,75,0	0/0:18,0:18:48.15:0,48,604	0/0:31,0:31:87.25:0,87,1067	1/1:5,18:23:51.11:519,51,0	0/0:19,0:19:45.14:0,45,566	1/1:1,19:20:57.13:582,57,0	1/1:0,23:23:63.14:642,63,0	0/0:27,0:27:75.23:0,75,930	0/0:27,0:27:81.26:0,81,1016	0/0:17,0:17:51.14:0,51,617	1/1:4,18:22:45.10:459,45,0	1/1:2,26:28:34.40:666,34,0	1/1:1,16:17:42.10:429,42,0	1/1:0,24:24:66.15:673,66,0	1/1:0,22:22:57.11:575,57,0	1/1:1,27:28:78.17:794,78,0	1/1:2,23:25:57.13:581,57,0	0/0:17,0:17:48.12:0,48,566	0/0:19,0:19:54.17:0,54,679	0/0:11,0:11:30.10:0,30,377	1/1:4,21:25:60.13:612,60,0	1/1:1,30:31:87.18:882,87,0	1/1:0,24:24:69.16:704,69,0	1/1:0,8:8:24.05:245,24,0
chr10	16791162	.	C	CCT	8242.75	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=4.179;DP=650;FS=5.832;HRun=0;HaplotypeScore=105.7248;InbreedingCoeff=0.9894;MQ=85.09;MQ0=0;MQRankSum=-4.563;QD=48.20;ReadPosRankSum=3.012;VQSLOD=5.9498;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,129,1816	1/1:0,6:6:18.06:337,18,0	0/0:25,0:25:66.19:0,66,929	0/0:16,0:16:32.51:0,33,546	1/1:0,25:25:72.25:1338,72,0	0/0:21,0:21:60.20:0,60,878	0/0:29,0:29:87.23:0,87,1236	0/0:31,0:31:84.27:0,84,1189	0/0:23,0:23:69.20:0,69,976	1/1:0,14:14:42.13:745,42,0	1/1:1,13:15:30.10:555,30,0	0/0:31,0:31:90.29:0,90,1305	0/0:32,0:32:90.30:0,90,1322	0/0:30,0:30:90.30:0,90,1324	1/1:2,23:25:69.24:1292,69,0	0/0:24,0:24:63.21:0,63,919	1/1:4,28:32:81.19:1457,81,0	0/0:26,0:26:75.20:0,75,1060	0/0:26,0:26:72.23:0,72,1025	0/0:14,0:14:42.14:0,42,606	0/0:42,0:42:99:0,126,1772	0/0:21,0:21:63.19:0,63,888	0/0:12,0:12:33.11:0,33,483	0/0:17,0:17:51.14:0,51,711	0/0:15,0:15:45.14:0,45,643	1/1:2,15:18:51.14:889,51,0	1/1:9,23:32:84.02:1462,84,0	1/1:0,4:4:9.03:168,9,0
chr10	16791730	.	AC	A	6091.75	PASS	AB=0.588;AC=31;AF=0.574;AN=54;BaseQRankSum=13.941;DP=459;FS=16.450;HRun=3;HaplotypeScore=99.2613;InbreedingCoeff=0.8593;MQ=40.35;MQ0=70;MQRankSum=-4.108;QD=24.97;ReadPosRankSum=-0.695;VQSLOD=3.1694;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:45,1:42:64.72:0,65,1271	1/1:0,4:4:12.04:149,12,0	./.	0/0:2,1:1:2.97:0,3,20	1/1:1,12:11:30.09:371,30,0	0/0:23,0:21:45.11:0,45,623	0/0:16,0:10:30.08:0,30,412	1/1:1,23:21:57.18:706,57,0	0/0:24,0:20:54.17:0,54,758	1/1:0,10:10:27.08:334,27,0	1/1:1,3:3:9.03:111,9,0	0/0:13,0:12:36.11:0,36,503	0/0:15,0:15:42.10:0,42,581	0/0:19,0:17:36.08:0,36,491	1/1:4,18:19:45.14:557,45,0	1/1:1,12:12:30.09:371,30,0	1/1:11,17:19:39.12:483,39,0	0/1:6,14:15:6.97:373,0,7	1/1:2,11:11:30.09:372,30,0	1/1:1,6:6:15.05:186,15,0	1/1:17,8:8:18.06:223,18,0	0/0:6,0:3:6.02:0,6,85	0/0:8,0:7:11.82:0,12,172	0/0:39,1:33:72.20:0,72,1013	1/1:1,12:12:36.11:446,36,0	1/1:4,16:18:51.16:630,51,0	1/1:4,20:20:57.18:706,57,0	1/1:2,2:2:6.02:74,6,0
chr10	16791954	.	GTTTC	G	1473.11	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.409;DP=537;FS=0.000;HRun=0;HaplotypeScore=87.9626;InbreedingCoeff=0.9961;MQ=70.73;MQ0=0;MQRankSum=-2.515;QD=44.64;ReadPosRankSum=2.728;VQSLOD=3.5425;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:78.27:0,78,2106	0/0:7,0:7:21.07:0,21,567	0/0:11,0:11:30.06:0,30,701	0/0:20,0:19:44.82:0,45,1063	0/0:24,0:24:72.25:0,72,1909	0/0:17,0:17:48.16:0,48,1221	0/0:28,0:28:78.25:0,78,2019	0/0:33,0:33:93.32:0,93,2462	0/0:23,0:23:69.24:0,69,1842	0/0:14,0:14:42.14:0,42,1124	0/0:18,0:18:54.19:0,54,1457	0/0:24,0:24:63.20:0,63,1640	0/0:17,0:17:51.18:0,51,1366	0/0:11,0:11:30.10:0,30,810	0/0:20,0:20:57.20:0,57,1525	1/1:0,17:17:45.13:854,45,0	0/0:28,0:28:72.25:0,72,1897	1/1:0,16:16:39.13:741,39,0	0/0:28,0:28:78.27:0,78,2091	0/0:11,0:11:33.11:0,33,891	0/0:22,0:22:60.21:0,60,1600	0/0:11,0:11:27.09:0,27,706	0/0:13,0:13:36.11:0,36,903	0/0:19,0:19:54.19:0,54,1457	0/0:15,0:15:42.14:0,42,1113	0/0:26,0:26:72.25:0,72,1938	0/0:26,0:26:72.25:0,72,1833	0/0:9,0:9:27.09:0,27,728
chr10	16792585	.	GAAAAGAA	G	4375.95	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-0.132;DP=516;FS=43.350;HRun=0;HaplotypeScore=143.8458;InbreedingCoeff=0.9692;MQ=54.19;MQ0=9;MQRankSum=-1.996;QD=31.94;ReadPosRankSum=0.172;VQSLOD=2.3437;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:47:99:0,111,3488	1/1:0,5:5:6.02:108,6,0	0/0:25,0:6:14.84:0,15,232	0/0:31,0:12:25.75:0,26,411	1/1:2,12:13:19.24:403,19,0	0/0:15,0:14:36.10:0,36,1053	0/0:18,0:16:41.28:0,41,1162	0/0:29,0:28:58:0,58,1302	0/0:14,0:13:33.06:0,33,968	1/1:1,11:12:20.99:364,21,0	1/1:1,13:14:33.09:522,33,0	0/0:21,0:20:51.16:0,51,1359	0/0:15,0:14:29.76:0,30,690	0/0:14,0:12:30.09:0,30,849	1/1:1,15:16:12.04:305,12,0	0/0:15,0:15:30.10:0,30,847	1/1:7,24:31:39.13:979,39,0	0/0:20,0:19:40.86:0,41,928	0/0:16,0:13:24.02:0,24,709	0/0:20,0:19:51.99:0,52,1392	0/0:9,0:9:24.43:0,24,419	0/0:12,0:12:33.11:0,33,810	0/0:17,0:17:36.12:0,36,1226	0/0:22,0:21:34.24:0,34,1501	0/0:18,0:18:17.88:0,18,684	1/1:3,13:14:32.93:522,33,0	1/1:3,16:20:36.10:792,36,0	1/1:1,8:8:15.05:382,15,0
chr10	16792596	.	A	AAAC	1558.05	PASS	AB=0.875;AC=10;AF=0.179;AN=56;BaseQRankSum=3.451;DP=514;FS=25.120;HRun=0;HaplotypeScore=128.0175;InbreedingCoeff=0.7154;MQ=59.98;MQ0=7;MQRankSum=-7.534;QD=14.98;ReadPosRankSum=-1.231;VQSLOD=1.2248;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:43:99:0,111,1714	0/0:5,0:5:4.56:0,5,31	0/0:31,0:12:31.64:0,32,347	0/0:34,0:15:23.70:0,24,299	0/0:15,0:15:24.02:0,24,177	0/0:17,0:16:39.05:0,39,540	0/0:21,0:19:50.89:0,51,711	1/1:27,1:27:51.74:375,52,0	0/0:16,0:15:39.09:0,39,554	0/0:11,0:11:23.04:0,23,161	0/0:14,0:13:13.14:0,13,104	0/0:19,0:19:53.94:0,54,755	0/0:12,0:12:30.10:0,30,479	0/0:15,0:14:33.07:0,33,479	0/0:16,0:16:12.01:0,12,110	0/1:14,0:14:30.13:30,0,111	0/0:29,0:28:48.05:0,48,392	0/0:17,0:16:1.66:0,2,150	1/1:11,3:11:25.37:273,25,0	1/1:10,10:19:44.13:555,44,0	0/1:8,4:12:3.88:187,0,4	0/0:12,0:12:35.72:0,36,509	0/0:18,0:18:42.13:0,42,649	0/0:23,0:22:62.75:0,63,888	1/1:12,4:16:29.70:305,30,0	0/0:15,0:15:23.93:0,24,179	0/0:17,0:17:31.27:0,31,257	0/0:9,0:8:15.01:0,15,137
chr10	16792597	.	A	AAC	1473.82	PASS	AB=1.000;AC=12;AF=0.214;AN=56;BaseQRankSum=3.961;DP=519;FS=23.383;HRun=0;HaplotypeScore=121.6560;InbreedingCoeff=0.7453;MQ=61.89;MQ0=7;MQRankSum=-7.299;QD=12.28;ReadPosRankSum=-1.963;VQSLOD=1.4275;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:43:99:0,111,1562	0/0:5,0:5:5.98:0,6,48	0/0:33,0:14:35.63:0,36,363	0/0:34,0:15:28.59:0,29,325	0/0:15,0:15:29.85:0,30,233	0/0:19,0:18:39.03:0,39,491	0/0:23,0:21:53.98:0,54,670	1/1:26,0:25:58.67:415,59,0	0/0:15,0:15:39.07:0,39,504	0/0:12,0:12:23.70:0,24,181	0/0:14,0:13:26.79:0,27,179	0/0:19,0:19:53.93:0,54,680	0/0:13,0:13:30.10:0,30,433	0/0:15,0:14:35.94:0,36,456	0/0:15,0:15:14.98:0,15,127	0/1:14,0:14:66.61:67,0,96	0/0:29,0:28:48.53:0,49,373	0/1:16,0:16:19.33:19,0,146	1/1:14,1:12:29.43:241,29,0	1/1:20,1:20:47.78:412,48,0	1/1:12,0:12:7.51:209,8,0	0/0:12,0:12:35.75:0,36,464	0/0:18,0:18:42.13:0,42,590	0/0:23,0:22:66.05:0,66,848	1/1:14,2:16:32.84:288,33,0	0/0:15,0:15:24.82:0,25,197	0/0:17,0:17:32.94:0,33,278	0/0:9,0:8:15.01:0,15,137
chr10	16792601	.	AC	A	790.09	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=8.744;DP=480;FS=14.577;HRun=3;HaplotypeScore=112.1491;InbreedingCoeff=0.9433;MQ=65.98;MQ0=5;MQRankSum=-4.118;QD=9.52;ReadPosRankSum=-0.808;VQSLOD=0.2089;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,108,1323	0/0:4,0:4:5.28:0,5,21	0/0:33,0:15:26.60:0,27,359	0/0:34,0:16:41.67:0,42,396	0/0:17,0:17:33.92:0,34,188	0/0:17,0:18:47.80:0,48,481	0/0:24,0:23:57.58:0,58,626	1/1:3,11:13:34.25:247,34,0	0/0:14,0:15:38.92:0,39,430	0/0:12,0:12:28.39:0,28,171	0/0:12,0:11:29.99:0,30,132	0/0:19,0:20:44.23:0,44,539	0/0:13,0:13:38.65:0,39,423	0/0:15,0:15:38.98:0,39,415	0/0:15,0:15:14.03:0,14,68	1/1:8,0:8:4.83:13,5,0	0/0:30,0:29:58.70:0,59,307	1/1:5,4:9:15.81:151,16,0	1/1:10,2:11:22.15:158,22,0	1/1:11,5:16:34.07:154,34,0	1/1:13,1:14:21.27:131,21,0	0/0:14,0:14:39.04:0,39,445	0/0:18,0:18:45.11:0,45,537	0/0:22,0:22:60.52:0,61,681	1/1:8,2:10:22.46:127,22,0	0/0:13,0:13:26.94:0,27,145	0/0:16,0:16:33.04:0,33,150	0/0:9,0:8:14.16:0,14,69
chr10	16792602	.	C	CAAAAA	3600.16	PASS	AB=0.778;AC=13;AF=0.232;AN=56;BaseQRankSum=5.117;DP=484;FS=19.395;HRun=11;HaplotypeScore=131.6198;InbreedingCoeff=0.8744;MQ=67.86;MQ0=4;MQRankSum=-5.143;QD=43.38;ReadPosRankSum=-0.837;VQSLOD=0.6028;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,108,2359	0/0:4,0:4:6.02:0,6,103	0/0:36,0:17:43.30:0,43,640	0/0:33,0:16:34.91:0,35,534	0/0:17,0:17:36.09:0,36,513	0/0:18,0:18:51.03:0,51,851	0/0:25,0:24:66.08:0,66,1115	1/1:13,1:13:32.96:422,33,0	0/0:15,0:15:39.13:0,39,807	0/0:12,0:12:32.89:0,33,445	0/0:12,0:11:32.97:0,33,425	0/0:19,0:19:54.07:0,54,948	0/0:14,0:14:38.65:0,39,693	0/0:16,0:16:42.04:0,42,719	0/0:16,0:16:15.05:0,15,284	1/1:2,7:10:12.04:332,12,0	0/0:31,0:30:63.54:0,64,943	1/1:5,1:7:21.06:371,21,0	1/1:10,3:11:27.95:546,28,0	1/1:6,10:16:42.06:999,42,0	0/1:10,4:14:11.65:343,0,12	0/0:14,0:14:39.10:0,39,749	0/0:18,0:18:45.14:0,45,946	0/0:21,0:21:60.67:0,61,1235	1/1:5,4:9:27.09:587,27,0	0/0:13,0:13:28.27:0,28,452	0/0:17,0:17:36.08:0,36,662	0/0:9,0:8:15.05:0,15,316
chr10	16792885	.	ATATC	A	4223.81	PASS	AB=1.000;AC=36;AF=0.643;AN=56;BaseQRankSum=-6.107;DP=363;FS=31.165;HRun=0;HaplotypeScore=145.8717;InbreedingCoeff=-0.3936;MQ=47.20;MQ0=1;MQRankSum=-3.301;QD=11.70;ReadPosRankSum=-7.949;VQSLOD=0.1727;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:35,0:35:99:118,0,696	0/0:2,0:2:2.98:0,3,21	0/1:6,0:5:45.40:58,0,45	0/1:9,0:7:44.01:51,0,44	0/1:20,0:20:63.97:64,0,139	0/1:12,0:11:25.33:25,0,316	0/1:19,0:19:99:145,0,219	1/1:22,2:24:71.91:791,72,0	0/1:8,0:8:7.73:8,0,159	0/1:23,0:23:72.74:73,0,241	0/1:17,0:17:87.48:87,0,91	0/1:8,0:8:13.86:14,0,178	0/1:13,0:13:99:99,0,138	0/1:13,0:13:60.13:60,0,382	0/1:4,0:4:12.02:12,0,35	1/1:6,2:8:23.95:285,24,0	1/1:6,0:6:9.70:59,10,0	1/1:7,1:8:20.95:224,21,0	1/1:14,0:13:32.96:342,33,0	1/1:7,10:17:51.09:805,51,0	1/1:5,2:7:15.01:228,15,0	0/1:14,0:14:45.44:45,0,402	0/1:22,0:22:43.23:43,0,503	0/1:17,0:17:2.49:2,0,390	1/1:8,2:10:27.01:376,27,0	0/1:9,0:9:40.04:40,0,66	0/1:16,0:16:45.89:147,0,46	1/1:1,0:1:2.98:21,3,0
chr10	16792889	.	C	CAA	4318.35	PASS	AB=0.692;AC=10;AF=0.185;AN=54;BaseQRankSum=2.326;DP=378;FS=0.959;HRun=0;HaplotypeScore=174.6234;InbreedingCoeff=0.3625;MQ=44.93;MQ0=1;MQRankSum=-7.244;QD=35.11;ReadPosRankSum=2.903;VQSLOD=5.8478;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:36:96.28:0,96,1471	0/1:3,1:4:14.13:98,0,14	0/0:6,0:5:6.95:0,7,178	0/0:9,0:6:15.05:0,15,208	0/1:11,17:27:28.65:878,0,29	0/0:11,0:10:30.10:0,30,488	0/0:19,0:19:51.15:0,51,800	0/0:20,0:20:53.05:0,53,775	0/0:6,0:6:18.06:0,18,284	0/1:5,19:23:5.18:1077,0,5	1/1:5,15:20:9.81:826,10,0	0/0:8,0:8:18.06:0,18,292	0/0:13,0:13:36.12:0,36,583	0/0:12,0:12:36.12:0,36,577	0/1:5,2:7:2.01:158,0,2	0/0:8,0:8:23.55:0,24,296	0/1:5,3:8:7.69:179,0,8	0/0:7,0:7:20.47:0,20,238	0/0:13,0:12:33.06:0,33,427	0/0:17,0:17:28.46:0,28,370	0/0:7,0:7:14.52:0,15,143	0/0:14,0:14:42.14:0,42,680	0/0:21,0:21:54.18:0,54,859	0/0:16,0:16:42.14:0,42,665	0/0:11,0:11:23.24:0,23,250	0/1:8,8:16:38.61:402,0,39	1/1:5,11:16:24.04:700,24,0	./.
chr10	16792907	.	T	TTC	2342.69	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=3.081;DP=340;FS=15.028;HRun=0;HaplotypeScore=117.5343;InbreedingCoeff=0.9144;MQ=43.35;MQ0=6;MQRankSum=-7.991;QD=17.75;ReadPosRankSum=3.740;VQSLOD=3.0529;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:28:68.65:0,69,766	1/1:2,4:6:14.91:182,15,0	0/0:4,0:3:5.59:0,6,68	0/0:10,0:6:8.31:0,8,50	1/1:23,10:32:41.57:384,42,0	0/0:12,0:11:30.05:0,30,399	0/0:15,0:15:32.68:0,33,370	0/0:12,0:9:17.75:0,18,202	0/0:7,0:6:17.89:0,18,163	1/1:20,3:22:59.32:501,59,0	1/1:12,7:19:40.82:351,41,0	0/0:8,0:8:18.02:0,18,225	0/0:11,0:10:27.01:0,27,330	0/0:11,0:11:30.04:0,30,397	1/1:6,2:9:17.64:187,18,0	0/0:4,0:4:8.89:0,9,59	1/1:10,2:12:17.67:171,18,0	0/0:5,0:5:13.75:0,14,75	0/0:6,0:5:12.45:0,12,124	0/0:16,0:16:44.89:0,45,429	0/0:7,0:7:17.84:0,18,141	0/0:12,0:12:36.07:0,36,482	0/0:18,0:18:45:0,45,535	0/0:14,0:14:36.04:0,36,457	0/0:6,0:6:14.96:0,15,154	1/1:7,6:13:32.94:406,33,0	1/1:10,3:14:32.86:336,33,0	1/1:2,0:1:3.01:31,3,0
chr10	16792944	.	C	CT	4411.59	PASS	AB=1.000;AC=53;AF=0.946;AN=56;DP=228;FS=0.000;HRun=1;HaplotypeScore=74.9961;InbreedingCoeff=0.2267;MQ=31.88;MQ0=14;QD=20.42;VQSLOD=4.7794;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,4:8:9.03:135,9,0	1/1:4,2:6:14.94:148,15,0	0/1:11,0:3:0:0,0,0	0/0:12,0:1:0:0,0,0	1/1:15,4:18:17.60:144,18,0	1/1:5,2:6:9.02:116,9,0	1/1:6,11:15:33.06:433,33,0	1/1:2,8:9:24.08:359,24,0	1/1:2,3:4:12:154,12,0	1/1:4,2:6:12.01:151,12,0	1/1:8,2:9:8.94:83,9,0	1/1:0,9:9:24.04:325,24,0	1/1:4,9:12:27.01:354,27,0	1/1:1,2:3:6.02:90,6,0	1/1:2,5:7:15.02:200,15,0	1/1:1,2:3:8.95:86,9,0	1/1:3,4:7:9:111,9,0	1/1:1,3:4:12.01:157,12,0	1/1:1,3:4:9.03:135,9,0	1/1:11,0:11:14.85:102,15,0	1/1:1,2:3:3.01:45,3,0	1/1:2,0:3:8.95:86,9,0	1/1:7,1:7:3.01:45,3,0	1/1:4,8:11:24.01:303,24,0	1/1:5,1:6:5.87:39,6,0	1/1:6,5:11:20.99:260,21,0	1/1:5,5:10:26.94:307,27,0	1/1:1,1:1:3.01:45,3,0
chr10	16793032	.	CTGGTTCTTTTTTT	C	111.71	PASS	AC=4;AF=0.143;AN=28;BaseQRankSum=3.204;DP=219;FS=1.825;HRun=0;HaplotypeScore=91.0148;InbreedingCoeff=0.7307;MQ=45.72;MQ0=64;MQRankSum=-0.439;QD=7.98;ReadPosRankSum=1.909;VQSLOD=1.6146;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:25:39.95:0,40,1424	./.	0/0:21,0:1:3.01:0,3,52	0/0:13,0:3:8.06:0,8,70	./.	0/0:17,0:13:33.11:0,33,1346	0/0:14,0:9:21.96:0,22,748	1/1:4,5:4:12.04:185,12,0	0/0:9,0:8:24.08:0,24,961	./.	./.	0/0:13,0:11:24.08:0,24,1034	0/0:15,0:14:33.01:0,33,1173	0/0:16,0:14:27.56:0,28,1098	./.	./.	./.	1/1:5,0:1:2.98:21,3,0	./.	./.	./.	0/0:8,0:8:18.06:0,18,598	0/0:7,0:4:11.99:0,12,357	0/0:16,0:15:30.10:0,30,1160	./.	./.	./.	./.
chr10	16793389	.	TG	T	1328.90	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=3.618;DP=656;FS=2.086;HRun=3;HaplotypeScore=77.5414;InbreedingCoeff=0.9989;MQ=75.53;MQ0=0;MQRankSum=-0.143;QD=30.90;ReadPosRankSum=0.920;VQSLOD=3.5345;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,102,1428	0/0:9,0:9:24.08:0,24,344	0/0:15,0:15:45.15:0,45,625	0/0:22,0:22:61.75:0,62,846	0/0:28,0:28:57.17:0,57,800	0/0:34,0:34:93.29:0,93,1306	0/0:25,0:25:75.25:0,75,1078	0/0:31,0:31:90.30:0,90,1296	0/0:20,0:20:54.18:0,54,769	0/0:24,0:24:69.23:0,69,993	0/0:24,0:24:51.15:0,51,714	0/0:18,0:18:45.15:0,45,648	0/0:27,0:27:75.25:0,75,1078	0/0:21,0:21:60.20:0,60,863	0/0:25,0:25:72.24:0,72,1036	1/1:0,27:27:72.23:893,72,0	0/0:24,0:24:72.20:0,72,1014	1/1:0,16:16:45.14:558,45,0	0/0:25,0:25:72.22:0,72,1014	0/0:31,0:31:72.23:0,72,1017	0/0:26,0:26:75.17:0,75,1018	0/0:22,0:22:60.19:0,60,846	0/0:18,0:18:48.15:0,48,672	0/0:17,0:17:51.17:0,51,735	0/0:22,0:22:60.20:0,60,863	0/0:24,0:24:63.21:0,63,907	0/0:23,0:23:69.23:0,69,992	0/0:23,0:23:66.22:0,66,950
chr10	16793641	.	TTCC	T	1385.05	PASS	AB=0.957;AC=10;AF=0.179;AN=56;BaseQRankSum=7.756;DP=726;FS=23.898;HRun=0;HaplotypeScore=171.2759;InbreedingCoeff=0.0253;MQ=66.10;MQ0=9;MQRankSum=-5.375;QD=6.63;ReadPosRankSum=-6.693;VQSLOD=-0.6686;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,129,2535	0/1:12,0:12:34:122,0,34	0/0:36,0:23:41.58:0,42,734	0/0:29,0:22:32.44:0,32,542	0/1:31,1:31:36.95:37,0,109	0/0:22,0:21:54.17:0,54,1094	0/0:29,0:28:66.19:0,66,1274	0/0:32,0:31:69.11:0,69,1244	0/0:23,0:23:63.22:0,63,1290	1/1:14,3:17:20.98:284,21,0	0/1:21,0:21:61.78:68,0,62	0/0:28,0:28:69.24:0,69,1449	0/0:23,0:23:66.23:0,66,1332	0/0:32,0:32:41.43:0,41,1469	0/1:23,3:26:88.43:257,0,88	0/0:32,0:31:93.26:0,93,1728	0/1:25,1:26:78.36:78,0,140	0/0:15,0:15:35.07:0,35,816	0/0:21,0:19:36.11:0,36,611	0/0:21,0:21:63.21:0,63,1202	0/0:37,0:35:99:0,99,1850	0/0:19,0:19:51.10:0,51,940	0/0:24,0:24:57.09:0,57,937	0/0:22,0:22:60.09:0,60,1068	0/0:24,0:24:69.23:0,69,1323	0/1:24,3:27:24.46:326,0,24	0/1:23,2:25:99:234,0,114	0/1:23,0:23:99:130,0,125
chr10	16794376	.	CAAACCAAACCAA	C	5069	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=9.492;DP=457;FS=1.243;HRun=0;HaplotypeScore=137.4268;InbreedingCoeff=0.9432;MQ=62.94;MQ0=11;MQRankSum=-4.414;QD=45.67;ReadPosRankSum=0.833;VQSLOD=4.6240;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:78.20:0,78,3142	1/1:0,6:6:12.04:394,12,0	0/0:60,0:18:15.39:0,15,269	0/0:68,0:21:17.84:0,18,576	1/1:3,6:9:11.98:282,12,0	0/0:13,0:12:32.47:0,32,1094	0/0:12,0:12:27.07:0,27,1050	0/0:32,0:31:37.59:0,38,1940	0/0:7,0:7:18.04:0,18,611	1/1:4,10:13:30.05:715,30,0	1/1:2,10:12:20.96:646,21,0	0/0:10,0:10:26.39:0,26,766	0/0:8,0:8:15.05:0,15,717	0/0:8,0:8:18.06:0,18,457	1/1:1,13:17:24.93:837,25,0	0/0:5,0:5:12.03:0,12,479	1/1:11,9:20:29.54:768,30,0	0/0:20,0:20:43.41:0,43,1566	0/0:11,0:11:24.06:0,24,537	0/0:17,0:17:47.65:0,48,1842	0/0:8,0:8:19.62:0,20,881	0/0:12,0:12:33.11:0,33,1456	0/0:8,0:8:21.07:0,21,797	0/0:8,0:8:20.43:0,20,831	0/0:11,0:11:27.09:0,27,1022	1/1:3,12:15:21.02:714,21,0	1/1:1,13:14:19.04:622,19,0	1/1:0,3:3:3.01:91,3,0
chr10	16794386	.	CA	C	735.59	PASS	AB=0.859;AC=36;AF=0.643;AN=56;BaseQRankSum=4.371;DP=541;FS=0.000;HRun=17;HaplotypeScore=97.9091;InbreedingCoeff=0.1829;MQ=62.93;MQ0=24;MQRankSum=-3.852;QD=1.94;ReadPosRankSum=2.177;VQSLOD=-0.6889;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,3:30:2.14:0,2,241	1/1:6,0:6:8.15:25,8,0	0/1:70,0:17:3.93:4,0,7	0/0:80,0:22:21.48:0,21,125	1/1:8,0:9:4.48:15,4,0	0/1:15,5:18:35.29:35,0,42	0/1:12,2:13:6.59:7,0,138	0/1:20,14:35:61.65:128,0,62	0/1:5,1:6:11.50:11,0,31	1/1:16,0:15:18.79:61,19,0	1/1:11,1:12:12.33:47,12,0	0/1:11,3:14:14.34:14,0,73	0/0:9,0:10:15.18:0,15,98	0/1:4,1:8:4.93:5,0,48	1/1:17,0:18:18.98:65,19,0	0/1:3,1:13:8.84:9,0,29	1/1:15,1:18:18.43:71,18,0	0/0:8,1:29:18.39:0,18,163	1/1:7,5:12:13.57:69,14,0	1/1:13,3:21:1.20:82,1,0	1/1:6,3:9:11.51:66,12,0	0/0:9,1:12:4.04:0,4,117	0/1:8,1:9:7.77:8,0,36	0/1:12,1:13:1.81:2,0,77	1/1:6,4:12:4.96:104,5,0	1/1:18,1:19:5.53:41,6,0	1/1:13,0:14:10.18:32,10,0	1/1:3,0:3:2.04:6,2,0
chr10	16794674	.	A	AG	8220.30	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=-0.684;DP=581;FS=11.851;HRun=8;HaplotypeScore=69.3078;InbreedingCoeff=0.9792;MQ=77.89;MQ0=0;MQRankSum=-3.784;QD=25.77;ReadPosRankSum=2.000;VQSLOD=5.0359;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:92.99:0,93,839	1/1:2,2:4:5.98:54,6,0	0/0:17,0:17:32.40:0,32,294	0/0:15,0:15:26.60:0,27,227	1/1:3,8:11:24.07:277,24,0	0/0:15,0:15:39:0,39,354	0/0:25,0:25:65.97:0,66,590	1/1:9,12:22:36.05:382,36,0	0/0:21,0:21:57.01:0,57,517	1/1:4,16:20:23.66:514,24,0	1/1:1,14:15:30.09:346,30,0	0/0:28,0:28:81.04:0,81,741	0/0:33,0:33:84.01:0,84,768	0/0:29,0:29:86.91:0,87,768	1/1:1,24:25:63.19:727,63,0	1/1:2,27:29:75.22:862,75,0	1/1:7,25:32:72.20:822,72,0	1/1:3,16:19:39.11:449,39,0	1/1:5,9:15:27.03:290,27,0	1/1:0,11:11:27.08:312,27,0	1/1:11,39:50:99:1246,108,0	0/0:18,0:18:47.97:0,48,430	0/0:7,0:7:21.01:0,21,192	0/0:18,0:18:51.01:0,51,462	1/1:5,5:10:15.04:173,15,0	1/1:0,23:23:66.20:762,66,0	1/1:1,26:27:72.21:831,72,0	1/1:0,6:6:15.04:173,15,0
chr10	16794992	.	T	TC	4493.94	PASS	AB=0.729;AC=32;AF=0.593;AN=54;BaseQRankSum=-8.731;DP=604;FS=70.061;HRun=0;HaplotypeScore=94.0104;InbreedingCoeff=0.4737;MQ=64.25;MQ0=59;MQRankSum=-0.532;QD=10.24;ReadPosRankSum=4.464;VQSLOD=2.4178;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,1:30:11.28:137,11,0	0/0:4,0:4:7.49:0,7,41	0/0:28,0:16:46.35:0,46,589	0/0:31,0:18:46.56:0,47,649	0/0:23,0:22:30.49:0,30,162	1/1:4,1:27:17.23:161,17,0	1/1:8,1:20:3.45:23,3,0	1/1:5,14:16:26.45:594,26,0	1/1:9,10:18:28.83:367,29,0	0/1:12,0:12:11.86:12,0,59	0/0:7,0:6:5.60:0,6,40	1/1:6,1:25:11.89:140,12,0	1/1:8,7:11:0.68:166,1,0	1/1:13,1:27:2.99:24,3,0	0/0:27,0:22:32.18:0,32,154	0/1:13,16:25:2.60:437,0,3	0/1:23,0:20:1.11:1,0,35	0/1:5,0:18:16.88:23,0,17	1/1:4,13:15:14.52:572,15,0	1/1:0,0:6:3:26,3,0	0/1:20,46:57:3.32:1101,0,3	1/1:3,0:17:2.94:26,3,0	1/1:2,8:8:8.82:119,9,0	1/1:5,18:19:21.07:328,21,0	0/1:3,9:12:3.78:235,0,4	0/0:21,0:18:25.01:0,25,208	0/0:19,0:15:30.63:0,31,187	./.
chr10	16794993	.	G	GTGTC	2737.84	PASS	AB=1.000;AC=38;AF=0.704;AN=54;BaseQRankSum=3.563;DP=558;FS=30.704;HRun=0;HaplotypeScore=106.6434;InbreedingCoeff=-0.0066;MQ=66.33;MQ0=59;MQRankSum=-3.591;QD=5.88;ReadPosRankSum=6.164;VQSLOD=0.0204;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:27:29.40:29,0,40	1/1:3,0:3:5.96:45,6,0	0/0:29,0:16:40.95:0,41,421	0/0:31,0:18:46.93:0,47,503	1/1:19,0:18:29.06:187,29,0	0/1:28,0:26:21.83:91,0,22	1/1:26,0:20:2.94:18,3,0	1/1:18,0:15:32.89:126,33,0	0/1:22,0:17:60.26:68,0,60	1/1:15,0:15:32.53:288,33,0	1/1:5,0:4:2.96:21,3,0	0/1:22,0:21:21.20:61,0,21	0/1:15,0:11:12.71:13,0,55	0/0:29,0:23:2.99:0,3,24	1/1:24,0:19:38.66:291,39,0	1/1:24,0:20:0.15:56,0,0	1/1:4,11:17:5.82:147,6,0	1/1:17,0:15:3.01:39,3,0	1/1:16,0:14:36.16:173,36,0	0/1:5,0:5:13.91:25,0,14	1/1:65,0:56:85.53:622,86,0	0/1:17,0:16:19.88:25,0,20	0/1:11,0:8:27.75:31,0,28	0/1:24,0:19:18.50:36,0,18	0/1:12,0:12:4.33:69,0,4	1/1:17,0:14:38.63:303,39,0	1/1:14,0:11:19.55:135,20,0	./.
chr10	16796053	.	AC	A	7047.41	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-18.070;DP=615;FS=21.170;HRun=9;HaplotypeScore=118.3166;InbreedingCoeff=0.9328;MQ=69.52;MQ0=1;MQRankSum=-1.910;QD=20.97;ReadPosRankSum=1.149;VQSLOD=3.6082;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,33:43:73.12:787,73,0	0/0:13,0:13:32.99:0,33,148	0/0:31,1:29:30.45:0,30,537	0/0:25,0:22:38.58:0,39,351	0/0:21,0:21:54.88:0,55,244	1/1:1,15:15:39.02:357,39,0	1/1:2,18:20:45.02:412,45,0	1/1:7,17:24:50.99:461,51,0	1/1:2,23:25:63.03:575,63,0	0/0:29,0:29:60.38:0,60,269	0/0:9,0:9:24.63:0,25,109	1/1:7,21:28:60.01:547,60,0	1/1:2,20:22:57.02:520,57,0	1/1:5,24:29:54.02:494,54,0	0/0:29,0:29:65.87:0,66,294	0/0:4,0:10:2.84:0,3,14	0/0:32,0:32:71.58:0,72,326	0/0:2,0:8:2.24:0,2,14	1/1:3,8:11:23.98:210,24,0	1/1:3,10:13:29.96:262,30,0	1/1:4,32:38:97.12:863,97,0	1/1:4,7:11:29.97:265,30,0	1/1:2,10:13:35.05:307,35,0	1/1:2,17:19:51.02:465,51,0	1/1:2,21:23:57.03:522,57,0	0/0:38,0:39:99:0,102,461	0/0:30,0:30:71.29:0,71,317	0/0:2,0:2:5.49:0,5,25
chr10	16796058	.	C	CCT	9543.68	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=-11.866;DP=626;FS=4.957;HRun=0;HaplotypeScore=122.9085;InbreedingCoeff=0.8810;MQ=70.75;MQ0=1;MQRankSum=-1.145;QD=44.18;ReadPosRankSum=2.290;VQSLOD=6.2574;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,104,800	1/1:1,12:13:36.12:632,36,0	0/0:41,0:35:88.66:0,89,1017	0/0:25,0:21:39.61:0,40,539	1/1:1,19:21:60.20:1054,60,0	0/0:17,0:17:41.78:0,42,315	0/0:20,0:20:47.74:0,48,359	0/0:23,0:23:62.72:0,63,485	0/0:24,0:24:62.65:0,63,468	1/1:2,27:29:78.18:1248,78,0	1/1:0,9:9:27.09:475,27,0	0/0:29,0:29:77.68:0,78,606	0/0:23,0:23:59.67:0,60,449	0/0:27,0:26:56.67:0,57,422	1/1:2,27:30:72.23:1268,72,0	0/0:10,0:10:1.13:0,1,17	1/1:0,31:31:78.26:1350,78,0	0/1:8,0:8:8.69:20,0,9	0/0:11,0:11:32.64:0,33,249	0/0:13,0:13:35.77:0,36,268	0/0:41,0:41:99:0,110,829	0/0:10,0:10:29.80:0,30,220	0/0:14,0:14:35.79:0,36,266	0/0:19,0:19:53.72:0,54,405	0/0:22,0:22:56.68:0,57,423	1/1:3,41:44:99:2031,126,0	1/1:0,28:29:78.27:1360,78,0	1/1:0,2:2:6.02:106,6,0
chr10	16796344	.	G	GC	6663.98	PASS	AB=0.526;AC=17;AF=0.304;AN=56;BaseQRankSum=-12.510;DP=618;FS=2.946;HRun=3;HaplotypeScore=79.5907;InbreedingCoeff=0.9229;MQ=64.42;MQ0=0;MQRankSum=-0.301;QD=35.26;ReadPosRankSum=-0.307;VQSLOD=5.2028;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,99,1173	1/1:1,9:10:27.09:378,27,0	0/0:24,0:18:45.14:0,45,537	0/0:26,0:22:60.15:0,60,696	1/1:1,23:24:57.19:795,57,0	0/0:16,0:16:39.12:0,39,466	0/0:25,0:25:63.18:0,63,744	0/0:20,0:20:60.17:0,60,701	0/0:22,0:22:54.16:0,54,647	1/1:5,20:24:54.18:751,54,0	1/1:1,13:14:39.13:545,39,0	0/0:25,0:25:72.22:0,72,864	0/0:21,0:21:57.13:0,57,668	0/0:20,0:20:51.16:0,51,612	1/1:0,14:14:39.13:546,39,0	0/0:21,0:21:51.16:0,51,612	1/1:0,29:29:81.23:1112,81,0	0/0:37,0:37:99:0,108,1296	0/0:21,0:20:48.15:0,48,576	0/0:21,0:21:60.17:0,60,708	0/0:28,0:28:69.20:0,69,817	0/0:14,0:14:39.12:0,39,468	0/0:19,0:19:48.14:0,48,576	0/0:20,0:20:51.16:0,51,612	0/0:12,0:12:33.10:0,33,396	1/1:1,32:33:96.30:1324,96,0	1/1:1,29:30:69.19:943,69,0	0/1:1,9:10:10.21:270,0,10
chr10	16796363	.	TC	T	5104.60	PASS	AB=0.952;AC=25;AF=0.446;AN=56;BaseQRankSum=-4.825;DP=558;FS=2.067;HRun=10;HaplotypeScore=80.8405;InbreedingCoeff=0.9098;MQ=69.15;MQ0=0;MQRankSum=-0.043;QD=17.60;ReadPosRankSum=4.678;VQSLOD=5.4377;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:11,23:35:59.01:501,59,0	0/0:7,0:7:21.06:0,21,232	0/1:19,1:17:3.43:3,0,303	0/0:14,0:14:11.27:0,11,127	0/0:17,1:18:21.95:0,22,436	1/1:2,15:17:35.99:312,36,0	1/1:4,19:23:50.98:443,51,0	0/0:18,0:19:35.11:0,35,397	1/1:3,19:22:53.91:460,54,0	0/0:18,0:18:19.36:0,19,318	0/0:8,0:8:18.05:0,18,199	1/1:4,18:23:56.49:475,56,0	1/1:4,21:25:26.80:461,27,0	1/1:4,15:19:44.99:390,45,0	0/0:15,0:15:33.07:0,33,355	1/1:0,15:15:38.99:339,39,0	0/0:33,0:33:32.98:0,33,797	1/1:4,28:33:80.01:683,80,0	0/0:12,1:12:3.99:0,4,260	0/0:20,0:20:33.30:0,33,444	0/0:22,4:26:40.04:0,40,645	1/1:1,13:15:31.93:257,32,0	1/1:4,12:17:32.99:285,33,0	1/1:4,22:26:56.99:495,57,0	0/0:12,0:12:7.38:0,7,290	0/0:26,0:26:71.28:0,71,734	0/0:27,0:27:50.81:0,51,488	0/0:12,0:12:20.98:0,21,194
chr10	16796480	.	A	AG	4693.66	PASS	AC=16;AF=0.296;AN=54;BaseQRankSum=4.214;DP=620;FS=1.633;HRun=7;HaplotypeScore=79.7434;InbreedingCoeff=0.9958;MQ=76.55;MQ0=0;MQRankSum=-2.561;QD=28.80;ReadPosRankSum=0.047;VQSLOD=5.2173;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,99,955	1/1:0,6:6:18.05:213,18,0	0/0:30,1:29:38.03:0,38,445	0/0:22,0:21:47.06:0,47,426	1/1:1,14:15:39.12:470,39,0	0/0:20,0:20:54.09:0,54,521	0/0:31,0:31:87.11:0,87,829	0/0:22,0:22:54.07:0,54,521	0/0:21,0:21:54.08:0,54,521	1/1:2,14:16:39.10:457,39,0	1/1:0,10:10:24.07:290,24,0	0/0:24,0:24:63.10:0,63,608	0/0:25,0:25:72.12:0,72,695	0/0:18,0:19:44.09:0,44,411	1/1:4,17:21:16.18:478,16,0	0/0:32,0:32:81.10:0,81,768	1/1:2,32:34:90.28:1087,90,0	0/0:28,0:28:70.35:0,70,670	0/0:16,0:16:42.06:0,42,402	0/0:14,0:14:42:0,42,390	0/0:37,0:37:93.14:0,93,898	0/0:12,0:12:24.01:0,24,232	0/0:14,0:14:39.06:0,39,376	0/0:32,0:32:96.08:0,96,910	0/0:19,0:19:41.98:0,42,394	1/1:6,22:28:66.20:797,66,0	1/1:3,30:33:74.63:901,75,0	./.
chr10	16797254	.	AGAGGAG	A	2620.67	PASS	AB=1.000;AC=30;AF=0.536;AN=56;BaseQRankSum=10.666;DP=575;FS=3.487;HRun=0;HaplotypeScore=176.2231;InbreedingCoeff=-0.0841;MQ=59.32;MQ0=5;MQRankSum=-10.977;QD=5.98;ReadPosRankSum=1.849;VQSLOD=2.7219;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:35,0:35:82.43:82,0,216	1/1:1,0:1:1.25:3,1,0	0/0:31,0:15:24.65:0,25,483	0/0:27,0:17:33.03:0,33,751	1/1:8,0:8:8.25:113,8,0	0/1:22,0:22:50.48:50,0,312	0/1:24,0:24:92.62:93,0,181	0/0:37,0:37:47.71:0,48,1215	0/1:25,0:25:63.37:63,0,326	0/1:10,0:9:8.72:126,0,9	1/1:7,0:7:10.26:106,10,0	0/1:27,0:27:85.72:139,0,86	0/1:24,0:24:82.64:141,0,83	0/1:29,0:28:84.15:84,0,221	1/1:19,0:19:42.89:509,43,0	0/0:14,0:14:38.92:0,39,783	1/1:16,0:16:2.98:323,3,0	0/0:11,0:11:33:0,33,486	0/0:16,0:16:8.25:0,8,404	0/1:20,0:20:86.90:87,0,163	0/1:38,0:38:95:95,0,122	0/1:18,0:18:63.83:64,0,118	1/1:20,0:20:14:131,14,0	0/1:38,0:38:44.53:45,0,195	1/1:19,0:19:28.07:134,28,0	1/1:5,14:19:0.51:361,1,0	0/1:1,0:11:9:9,0,64	0/1:7,0:7:8.16:38,0,8
chr10	16797265	.	AGGAGGT	A	12184.30	PASS	AB=1.000;AC=44;AF=0.786;AN=56;BaseQRankSum=-7.095;DP=546;FS=1.535;HRun=0;HaplotypeScore=130.6903;InbreedingCoeff=-0.1088;MQ=56.17;MQ0=5;MQRankSum=-0.103;QD=22.36;ReadPosRankSum=-1.751;VQSLOD=4.5276;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,31:33:42.08:882,42,0	0/0:1,0:1:2.90:0,3,16	0/1:25,0:8:20.72:52,0,21	0/1:25,0:15:87.62:127,0,88	1/1:10,0:10:1.05:18,1,0	1/1:3,17:20:30.10:644,30,0	1/1:2,21:24:36.12:778,36,0	1/1:2,36:38:95.58:1144,96,0	1/1:4,21:25:24.08:551,24,0	0/1:7,0:6:8.25:8,0,69	1/1:7,0:7:8.86:63,9,0	1/1:3,25:28:45.15:997,45,0	1/1:1,24:25:42.14:965,42,0	1/1:5,23:27:36.07:751,36,0	0/1:14,0:14:33.20:204,0,33	0/1:13,0:13:85.14:111,0,85	0/1:11,0:11:19.33:19,0,29	0/1:10,0:10:68.43:98,0,68	1/1:1,16:17:47.84:562,48,0	1/1:5,13:18:42.09:849,42,0	1/1:2,36:38:31.28:623,31,0	1/1:0,17:17:30.03:622,30,0	1/1:0,21:21:36.08:790,36,0	1/1:1,34:35:17.90:403,18,0	1/1:1,18:19:30.10:689,30,0	0/1:20,0:20:99:158,0,103	0/1:5,0:4:12.96:13,0,65	0/1:11,0:11:40.91:64,0,41
chr10	16797268	.	AGGT	A	6157.84	PASS	AB=1.000;AC=48;AF=0.857;AN=56;BaseQRankSum=-5.470;DP=529;FS=0.894;HRun=0;HaplotypeScore=129.6271;InbreedingCoeff=-0.1236;MQ=55.13;MQ0=5;MQRankSum=-0.593;QD=11.64;ReadPosRankSum=-0.914;VQSLOD=4.0168;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:32,1:33:41.43:337,41,0	1/1:1,0:1:2.98:21,3,0	0/1:23,0:7:30.56:40,0,31	0/1:26,0:16:99:174,0,102	1/1:9,0:9:9.67:59,10,0	1/1:17,0:17:29.81:248,30,0	1/1:23,0:24:35.79:299,36,0	1/1:36,0:36:95.64:773,96,0	1/1:22,0:22:24.01:215,24,0	0/1:6,0:5:11.66:12,0,28	1/1:8,0:8:13.19:106,13,0	1/1:25,0:26:44.93:393,45,0	1/1:24,0:24:42.02:377,42,0	1/1:27,0:26:34.43:269,34,0	0/1:15,0:15:0.37:150,0,0	1/1:13,0:13:26.47:174,26,0	0/1:10,0:10:2.20:116,0,2	0/1:11,0:11:25.42:108,0,25	1/1:17,0:17:46.64:361,47,0	1/1:13,4:17:39.39:334,39,0	1/1:36,1:37:31.16:263,31,0	1/1:17,0:17:29.78:253,30,0	1/1:21,0:21:35.91:312,36,0	1/1:34,0:34:16.46:150,16,0	1/1:18,1:19:30.02:270,30,0	1/1:21,0:20:14.33:212,14,0	0/1:5,0:4:11.99:12,0,26	0/1:10,0:10:17.78:123,0,18
chr10	16797291	.	GAGT	G	651.20	PASS	AB=0.973;AC=16;AF=0.286;AN=56;BaseQRankSum=9.703;DP=524;FS=13.803;HRun=0;HaplotypeScore=142.9853;InbreedingCoeff=0.2436;MQ=56.88;MQ0=1;MQRankSum=-8.467;QD=4.72;ReadPosRankSum=4.716;VQSLOD=1.1053;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,1:36:17.90:0,18,240	1/1:2,0:2:2.93:18,3,0	0/0:12,0:8:14.15:0,14,192	0/0:16,0:14:41.93:0,42,503	1/1:10,0:10:9.08:60,9,0	0/0:20,0:20:21.69:0,22,168	0/0:26,0:26:25.73:0,26,272	0/0:37,0:37:39.37:0,39,439	0/0:20,0:20:11.91:0,12,121	0/1:8,0:7:24.71:52,0,25	1/1:9,0:9:11.55:94,12,0	0/0:34,0:34:17.99:0,18,231	0/0:25,0:25:14.45:0,14,141	0/0:22,0:22:9.10:0,9,90	0/1:14,0:14:25.68:31,0,26	0/0:12,0:12:20.60:0,21,175	0/1:8,0:8:7.03:98,0,7	0/0:8,0:8:20.21:0,20,222	0/0:17,0:17:32.86:0,33,311	0/1:17,4:21:18.36:18,0,114	0/0:45,0:45:29.69:0,30,337	0/1:12,0:12:3.76:4,0,17	0/0:18,0:18:7.42:0,7,114	0/0:38,0:38:33.80:0,34,274	0/1:15,1:16:11.40:11,0,40	1/1:19,0:18:5.69:255,6,0	0/1:6,0:4:11.52:12,0,28	0/1:13,0:13:11.74:162,0,12
chr10	16797994	.	GAGAACCCTGAATGTT	G	16143.58	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=15.339;DP=664;FS=1.585;HRun=0;HaplotypeScore=324.3639;InbreedingCoeff=0.9717;MQ=71.03;MQ0=0;MQRankSum=-14.283;QD=84.08;ReadPosRankSum=2.207;VQSLOD=4.1474;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,154,10303	1/1:4,7:11:21.07:957,21,0	0/0:22,0:22:66.23:0,66,3580	0/0:16,0:16:48.16:0,48,2876	1/1:1,27:28:65.69:2423,66,0	0/0:21,0:21:60.21:0,60,4053	0/0:23,0:23:66.21:0,66,4534	0/0:37,0:37:99:0,105,6167	0/0:23,0:23:69.22:0,69,4525	1/1:4,25:29:69.15:2609,69,0	1/1:3,11:14:28.88:895,29,0	0/0:13,0:13:39.13:0,39,2461	0/0:25,0:25:75.22:0,75,4905	0/0:32,0:32:96.33:0,96,6765	1/1:8,18:26:48.16:2187,48,0	0/0:32,0:32:93.31:0,93,6163	1/1:7,24:31:44.51:1699,45,0	0/0:20,0:20:60.21:0,60,4394	0/0:17,0:17:51.13:0,51,2828	0/0:20,0:20:60.21:0,60,4423	0/0:22,0:22:66.23:0,66,4257	0/0:15,0:15:42.14:0,42,2903	0/0:27,0:27:78.27:0,78,5703	0/0:26,0:26:78.23:0,78,4924	0/0:29,0:29:87.30:0,87,6400	1/1:6,16:23:51.17:2228,51,0	1/1:5,23:28:66.23:3008,66,0	1/1:1,1:2:3.01:137,3,0
chr10	16798184	.	TCC	T	8171.59	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=15.450;DP=661;FS=8.833;HRun=3;HaplotypeScore=82.8102;InbreedingCoeff=0.9982;MQ=58.59;MQ0=3;MQRankSum=1.011;QD=41.06;ReadPosRankSum=3.336;VQSLOD=3.9200;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,105,2028	1/1:0,7:7:18.06:275,18,0	0/0:31,0:23:66.23:0,66,1266	0/0:41,0:32:82.84:0,83,1483	1/1:2,20:22:54.18:827,54,0	0/0:18,0:18:54.19:0,54,1044	0/0:21,0:21:60.21:0,60,1160	0/0:39,0:39:99:0,114,2188	0/0:19,0:19:54.17:0,54,1002	1/1:2,23:24:69.23:1052,69,0	1/1:0,14:14:33.11:505,33,0	0/0:19,0:19:57.20:0,57,1101	0/0:26,0:26:78.24:0,78,1433	0/0:23,0:23:69.24:0,69,1327	1/1:1,33:34:93.32:1423,93,0	0/0:26,0:25:75.26:0,75,1449	1/1:0,38:38:99:1608,105,0	0/0:15,0:15:42.14:0,42,803	0/0:19,0:19:57.20:0,57,1084	0/0:16,0:16:48.16:0,48,927	0/0:33,0:33:93.32:0,93,1773	0/0:18,0:18:51.17:0,51,978	0/0:24,0:24:72.23:0,72,1352	0/0:29,0:29:84.28:0,84,1591	0/0:9,0:9:27.09:0,27,522	1/1:1,24:25:72.24:1103,72,0	1/1:0,24:24:66.22:1010,66,0	1/1:0,10:10:24.08:368,24,0
chr10	16799088	.	GA	G	2685.92	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=11.397;DP=590;FS=2.400;HRun=9;HaplotypeScore=65.5587;InbreedingCoeff=0.9667;MQ=57.01;MQ0=17;MQRankSum=-0.450;QD=16.68;ReadPosRankSum=-0.018;VQSLOD=3.7754;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:93.21:0,93,1037	1/1:3,5:8:12.01:110,12,0	0/0:33,1:8:11.97:0,12,104	0/0:46,2:12:7.62:0,8,115	1/1:8,7:13:20.94:179,21,0	0/0:15,0:15:39.11:0,39,442	0/0:20,0:19:45.10:0,45,497	0/0:23,0:23:50.98:0,51,568	0/0:17,0:17:45.13:0,45,516	1/1:8,12:19:16.39:303,16,0	1/1:7,24:27:62.94:565,63,0	0/0:21,0:21:51.10:0,51,565	0/0:21,0:21:60.15:0,60,673	0/0:21,0:19:42.08:0,42,470	1/1:6,10:16:32.98:297,33,0	0/0:22,0:21:57.14:0,57,638	1/1:6,12:18:41.76:384,42,0	0/0:21,0:21:54.13:0,54,601	0/0:17,0:16:45.12:0,45,510	0/0:19,0:20:57.11:0,57,631	0/0:13,0:13:36.11:0,36,416	0/0:15,0:15:33.08:0,33,366	0/0:18,0:18:51.14:0,51,576	0/0:25,0:25:60.18:0,60,692	0/0:13,0:13:29.19:0,29,375	1/1:5,17:22:53.82:479,54,0	1/1:9,14:23:47.97:429,48,0	1/1:3,5:8:9.21:153,9,0
chr10	16799118	.	G	GA	3628.78	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=2.460;DP=678;FS=0.000;HRun=10;HaplotypeScore=76.7101;InbreedingCoeff=0.8815;MQ=60.27;MQ0=21;MQRankSum=-3.384;QD=14.29;ReadPosRankSum=-0.440;VQSLOD=3.6786;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,2:38:55.05:0,55,646	1/1:3,1:3:3:26,3,0	0/0:78,0:16:19.45:0,19,153	0/1:88,0:23:31.18:31,0,102	1/1:1,9:11:20.72:187,21,0	0/0:23,0:23:59.87:0,60,486	0/0:23,0:23:47.91:0,48,394	0/0:34,0:34:38.76:0,39,596	0/0:17,0:16:10.03:0,10,265	1/1:5,18:23:32.53:551,33,0	1/1:4,15:21:44.90:445,45,0	0/0:20,0:20:59.53:0,60,478	0/0:19,0:19:47.94:0,48,394	0/0:15,0:15:38.93:0,39,319	1/1:2,14:16:39.10:414,39,0	0/0:18,0:18:53.94:0,54,443	1/1:5,20:26:33.57:577,34,0	0/0:20,1:21:21.94:0,22,385	0/0:24,0:24:46.43:0,46,367	0/0:20,0:20:47.92:0,48,392	0/0:14,0:14:21.97:0,22,214	0/0:11,0:11:26.96:0,27,222	0/0:14,0:14:29.92:0,30,242	0/0:16,0:16:47.93:0,48,392	0/0:18,0:18:50.94:0,51,419	1/1:8,24:32:72.18:767,72,0	1/1:7,17:24:24.62:438,25,0	1/1:1,7:8:18.05:192,18,0
chr10	16799817	.	A	AAT	281.58	PASS	AB=0.618;AC=3;AF=0.054;AN=56;BaseQRankSum=-3.703;DP=236;FS=0.000;HRun=0;HaplotypeScore=28.1326;InbreedingCoeff=0.1900;MQ=71.90;MQ0=2;MQRankSum=0.673;QD=12.24;ReadPosRankSum=2.074;VQSLOD=2.4595;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:30.08:0,30,365	0/0:2,0:2:6.02:0,6,76	0/0:8,0:8:8.88:0,9,76	0/0:6,0:4:2.55:0,3,25	0/0:3,0:3:6.02:0,6,76	0/0:18,0:18:45.14:0,45,567	0/0:2,0:2:6:0,6,62	0/0:48,0:48:99:0,114,1384	0/0:3,0:3:6.02:0,6,76	0/0:7,0:7:21.06:0,21,255	0/0:2,0:2:6.02:0,6,75	0/0:3,0:3:9.03:0,9,114	0/0:3,0:3:6.02:0,6,76	0/0:2,0:2:6.02:0,6,76	0/0:1,0:1:3.01:0,3,38	1/1:0,2:2:6.02:100,6,0	0/0:22,0:22:54.16:0,54,668	0/1:8,13:20:51.64:275,0,52	0/0:14,0:14:24.06:0,24,279	0/0:5,0:5:12.03:0,12,140	0/0:3,0:3:9.03:0,9,114	0/0:1,0:1:3.01:0,3,38	0/0:4,0:4:12.03:0,12,140	0/0:3,0:3:9.01:0,9,99	0/0:12,0:12:27.08:0,27,330	0/0:5,0:5:15.05:0,15,189	0/0:8,0:8:24.06:0,24,290	0/0:16,0:16:48.13:0,48,590
chr10	16802568	.	T	TCCCTCTGGGCCCGGCTCCTTAC	53124.74	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=6.065;DP=641;FS=0.000;HRun=0;HaplotypeScore=346.2040;InbreedingCoeff=0.9920;MQ=68.87;MQ0=0;MQRankSum=-18.370;QD=177.08;ReadPosRankSum=-3.348;VQSLOD=3.1509;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:93.27:0,93,4588	1/1:6,2:9:15.52:1250,16,0	0/0:14,0:14:29.69:0,30,1267	0/0:12,0:12:20.23:0,20,1108	1/1:19,4:23:47.96:2175,48,0	0/0:18,0:18:48.16:0,48,2631	0/0:23,0:23:69.20:0,69,3719	1/1:25,0:25:69.22:4212,69,0	0/0:30,0:30:81.23:0,81,4345	1/1:15,3:21:54.19:3823,54,0	1/1:17,3:21:48.16:2559,48,0	0/0:40,0:40:99:0,108,5743	0/0:28,0:28:84.29:0,84,4474	0/0:23,0:23:63.19:0,63,3209	1/1:19,12:33:90.31:7268,90,0	0/0:27,0:27:78.27:0,78,4512	1/1:18,6:24:60.21:5070,60,0	0/0:29,0:29:69.24:0,69,3954	1/1:15,6:23:54.17:3880,54,0	1/1:9,3:12:18.06:1329,18,0	1/1:20,1:24:36.12:1878,36,0	0/0:12,0:12:36.10:0,36,1764	0/0:16,0:16:42.14:0,42,2517	0/0:33,0:33:93.32:0,93,4794	1/1:20,5:25:66.23:5967,66,0	1/1:18,4:26:75.18:5151,75,0	1/1:23,5:30:87.30:7417,87,0	1/1:1,3:4:12.04:1147,12,0
chr10	16803012	.	TTCTCTCTCTCTTTCTCTCTCTC	T	6967.66	PASS	AB=1.000;AC=51;AF=0.911;AN=56;BaseQRankSum=-2.152;DP=514;FS=9.746;HRun=0;HaplotypeScore=261.0600;InbreedingCoeff=0.5747;MQ=80.96;MQ0=9;MQRankSum=-2.766;QD=15.62;ReadPosRankSum=2.937;VQSLOD=1.9316;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:24:11.30:297,11,0	1/1:13,0:13:17.73:137,18,0	0/0:26,0:18:33.23:0,33,357	0/0:42,0:29:0.52:0,1,171	1/1:12,0:10:14.97:121,15,0	1/1:18,0:18:31.83:271,32,0	1/1:25,0:25:50.95:446,51,0	1/1:25,0:25:42.01:338,42,0	1/1:4,14:19:6.02:257,6,0	1/1:23,0:23:54.03:499,54,0	1/1:10,0:10:20.97:173,21,0	1/1:23,0:23:40.13:333,40,0	1/1:14,0:14:15.83:247,16,0	1/1:18,0:18:29.22:237,29,0	1/1:16,0:15:26.97:224,27,0	1/1:17,0:17:17.46:249,17,0	1/1:11,0:11:20.87:160,21,0	1/1:22,0:23:26.98:466,27,0	1/1:12,0:12:9.94:217,10,0	1/1:9,0:9:8.34:54,8,0	1/1:26,0:26:32.45:375,32,0	1/1:13,0:13:19.52:171,20,0	1/1:8,0:8:14.62:119,15,0	1/1:29,1:30:49.63:602,50,0	0/1:11,0:11:6.49:63,0,6	1/1:12,0:12:35.86:292,36,0	1/1:17,0:17:33.67:246,34,0	1/1:16,0:16:47.81:372,48,0
chr10	16803588	.	G	GGTCT	7932.75	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-12.276;DP=767;FS=0.000;HRun=0;HaplotypeScore=121.7937;InbreedingCoeff=0.9846;MQ=87.57;MQ0=0;MQRankSum=-4.240;QD=51.18;ReadPosRankSum=-1.998;VQSLOD=5.2823;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:93.32:0,93,1642	0/0:4,0:4:9.03:0,9,160	0/0:26,0:26:72.19:0,72,1153	0/0:36,0:36:87.10:0,87,1380	0/0:22,0:22:48.14:0,48,800	0/0:19,0:19:54.17:0,54,933	0/0:22,0:22:54.17:0,54,929	1/1:12,23:36:87.18:1961,87,0	0/0:36,0:36:99:0,99,1722	0/0:27,0:27:66.20:0,66,1073	0/0:14,0:14:36.08:0,36,580	0/0:26,0:26:72.22:0,72,1225	0/0:38,0:38:99:0,99,1729	0/0:31,0:31:81.28:0,81,1425	0/0:20,0:20:57.18:0,57,986	0/0:38,0:38:99:0,108,1812	0/0:48,0:48:99:0,138,2396	0/0:37,0:37:93.21:0,93,1510	1/1:10,14:24:62.81:1381,63,0	1/1:3,12:15:33.11:843,33,0	1/1:9,46:58:99:2787,108,0	0/0:31,0:31:81.28:0,81,1437	0/0:15,0:15:33.08:0,33,555	0/0:30,0:30:87.28:0,87,1513	1/1:4,17:22:39.13:961,39,0	0/0:29,0:29:63.20:0,63,1091	0/0:23,0:23:54.17:0,54,926	0/0:6,0:6:18.02:0,18,260
chr10	16804629	.	T	TG	6467.52	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=8.134;DP=714;FS=6.653;HRun=0;HaplotypeScore=77.6357;InbreedingCoeff=0.9981;MQ=95.06;MQ0=0;MQRankSum=-3.912;QD=45.55;ReadPosRankSum=-2.655;VQSLOD=3.8054;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:56:99:0,169,2346	0/0:7,0:7:18.06:0,18,252	0/0:39,0:39:92.98:0,93,1455	0/0:25,0:25:75.20:0,75,972	0/0:14,0:14:42.14:0,42,587	0/0:30,0:30:90.29:0,90,1242	0/0:28,0:28:84.28:0,84,1175	1/1:1,43:44:99:1957,126,0	0/0:19,0:19:57.19:0,57,797	0/0:17,0:17:51.17:0,51,713	0/0:15,0:15:45.15:0,45,629	0/0:33,0:33:99:0,99,1369	0/0:28,0:28:84.28:0,84,1172	0/0:23,0:23:69.22:0,69,948	0/0:29,0:29:87.28:0,87,1201	0/0:29,0:29:84.28:0,84,1174	0/0:36,0:36:99:0,108,1492	0/0:18,0:18:48.16:0,48,670	1/1:0,29:29:87.27:1344,87,0	1/1:0,16:16:48.16:767,48,0	1/1:1,36:37:99:1679,105,0	0/0:20,0:20:60.20:0,60,839	0/0:19,0:19:54.17:0,54,739	0/0:25,0:25:75.24:0,75,1031	1/1:0,16:16:45.15:720,45,0	0/0:27,0:27:81.26:0,81,1116	0/0:20,0:20:60.20:0,60,839	0/0:15,0:15:45.14:0,45,611
chr10	16805217	.	AACACACACAC	A	4249.21	PASS	AB=0.931;AC=22;AF=0.407;AN=54;BaseQRankSum=7.590;DP=618;FS=0.998;HRun=0;HaplotypeScore=238.1980;InbreedingCoeff=0.5194;MQ=66.12;MQ0=4;MQRankSum=-5.402;QD=15.91;ReadPosRankSum=-4.722;VQSLOD=2.7883;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:93.32:0,93,4232	1/1:6,2:8:9.02:184,9,0	0/1:28,0:15:26.12:26,0,1079	0/1:27,0:16:20.66:21,0,617	1/1:17,2:19:5.78:91,6,0	0/0:20,0:20:45.15:0,45,2311	0/0:45,0:46:99:0,129,6194	1/1:18,2:28:34.87:882,35,0	0/0:25,0:25:60.21:0,60,2934	0/1:21,2:24:31.81:395,0,32	./.	0/0:31,0:31:81.26:0,81,3807	0/0:25,0:25:61.15:0,61,2879	0/0:25,0:24:69.24:0,69,3368	1/1:30,1:33:19.93:412,20,0	0/0:24,0:24:60.19:0,60,2716	1/1:17,0:17:6.31:206,6,0	0/0:20,0:20:39.13:0,39,1834	0/1:6,1:8:0.08:227,0,0	1/1:5,0:12:8.24:150,8,0	0/0:5,0:7:0:0,0,0	0/0:21,0:21:51.65:0,52,2415	0/0:13,0:13:36.12:0,36,1694	0/0:48,0:48:99:0,105,4990	1/1:10,2:14:9.01:202,9,0	0/1:18,0:19:28.57:172,0,29	1/1:18,5:23:33.56:1141,34,0	0/1:5,0:5:4.75:140,0,5
chr10	16805222	.	A	ACTCT	2622.22	PASS	AB=1.000;AC=22;AF=0.407;AN=54;BaseQRankSum=9.195;DP=627;FS=35.457;HRun=0;HaplotypeScore=182.2799;InbreedingCoeff=0.7475;MQ=58.65;MQ0=15;MQRankSum=-7.470;QD=11.92;ReadPosRankSum=-1.850;VQSLOD=1.5499;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:93.32:0,93,1765	1/1:5,1:7:8.80:75,9,0	0/1:44,0:14:3.16:3,0,478	0/0:35,0:10:16.68:0,17,287	1/1:10,5:16:5.96:70,6,0	0/0:20,0:20:44.76:0,45,898	0/0:48,0:46:99:0,129,2514	0/0:12,0:12:10.62:0,11,47	0/0:26,0:26:60.17:0,60,1176	1/1:11,10:23:38.78:860,39,0	./.	0/0:32,0:32:84.26:0,84,1611	0/0:29,0:29:65.66:0,66,1192	0/0:30,0:29:78.25:0,78,1486	1/1:23,10:34:14.20:247,14,0	0/0:23,0:23:60.17:0,60,1042	1/1:15,2:17:2.88:234,3,0	0/0:19,0:19:39.13:0,39,672	1/1:5,0:4:2.54:24,3,0	1/1:11,0:11:1.23:33,1,0	0/0:4,0:4:0:0,0,0	0/0:25,0:25:54.15:0,54,964	0/0:16,0:16:36.12:0,36,681	0/0:44,0:44:99:0,105,2001	0/1:15,0:14:0.40:18,0,0	1/1:10,9:21:37.05:731,37,0	1/1:17,3:22:20.91:404,21,0	1/1:4,1:5:7.44:111,7,0
chr10	16805249	.	CTGAGTGTGTGTG	C	3167.85	PASS	AB=0.914;AC=13;AF=0.241;AN=54;BaseQRankSum=12.584;DP=712;FS=23.371;HRun=0;HaplotypeScore=259.1538;InbreedingCoeff=0.4542;MQ=47.93;MQ0=23;MQRankSum=-10.766;QD=16.16;ReadPosRankSum=1.240;VQSLOD=1.2576;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:34:51.77:0,52,970	1/1:5,1:6:9.03:234,9,0	0/0:60,0:10:23.61:0,24,176	0/0:49,0:9:15.76:0,16,108	0/0:18,0:19:0.17:0,0,1	0/0:25,0:25:42.01:0,42,911	0/0:43,0:41:98.67:0,99,2058	0/0:19,0:18:11.96:0,12,339	0/0:26,0:26:29.61:0,30,1536	0/1:29,0:29:1.16:386,0,1	./.	0/0:30,0:30:74.61:0,75,2105	0/0:26,0:26:55.44:0,55,1750	0/0:27,0:26:60.08:0,60,1453	1/1:34,0:33:8.81:76,9,0	0/1:18,0:19:99:369,0,105	1/1:9,6:15:7.55:184,8,0	0/1:21,0:21:99:358,0,166	0/0:9,0:8:11.52:0,12,213	0/0:9,0:9:5.97:0,6,138	0/0:17,0:17:10.44:0,10,402	0/0:24,0:24:24.30:0,24,1386	0/0:21,0:21:39.95:0,40,1348	0/0:49,0:48:99:0,101,3778	0/0:18,0:17:11.96:0,12,607	0/1:37,0:39:81.27:623,0,81	1/1:16,3:21:38.23:939,38,0	0/1:5,1:10:99:162,0,215
chr10	16805250	.	TGA	T	727.15	PASS	AB=0.987;AC=15;AF=0.278;AN=54;BaseQRankSum=9.347;DP=659;FS=59.092;HRun=0;HaplotypeScore=162.4977;InbreedingCoeff=0.3529;MQ=49.04;MQ0=23;MQRankSum=-7.959;QD=3.75;ReadPosRankSum=-0.258;VQSLOD=1.0516;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:51.41:0,51,416	1/1:5,1:6:4.91:66,5,0	0/0:60,0:10:23.61:0,24,176	0/0:48,0:9:14.88:0,15,106	0/1:16,1:17:0.13:0,0,0	0/0:25,0:25:41.97:0,42,368	0/0:42,0:40:79.87:0,80,787	0/0:11,0:10:12.45:0,12,169	0/0:25,0:25:30.31:0,30,426	0/1:24,1:25:22.21:172,0,22	./.	0/0:31,0:31:32.61:0,33,520	0/0:26,0:26:52.27:0,52,490	0/0:25,0:24:58.31:0,58,485	1/1:23,3:25:8.80:77,9,0	0/0:18,0:18:29.81:0,30,167	1/1:14,0:13:1.31:41,1,0	0/1:21,0:21:2.10:2,0,144	0/0:5,0:4:11.23:0,11,70	0/1:2,0:2:2.65:3,0,14	0/1:17,0:17:39.39:39,0,43	0/0:26,0:26:25.93:0,26,391	0/0:22,0:22:29.62:0,30,399	0/0:48,0:47:98.38:0,98,986	0/0:10,0:10:9.03:0,9,141	0/1:36,0:36:99:211,0,104	1/1:19,1:19:26.06:226,26,0	0/1:10,0:10:43.16:43,0,91
chr10	16805252	.	A	AGTGT	2180.60	PASS	AB=0.871;AC=20;AF=0.400;AN=50;BaseQRankSum=-6.932;DP=669;FS=0.000;HRun=0;HaplotypeScore=183.2854;InbreedingCoeff=0.4346;MQ=49.06;MQ0=23;MQRankSum=6.379;QD=6.21;ReadPosRankSum=-1.488;VQSLOD=2.2316;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:22,9:34:10.18:101,10,0	0/0:4,0:6:9.01:0,9,82	./.	./.	0/1:13,0:17:0:0,0,0	1/1:15,8:24:6.02:141,6,0	1/1:35,8:41:14.76:247,15,0	0/1:11,0:10:0:0,0,0	1/1:14,1:24:14.12:224,14,0	0/0:19,0:26:12.01:0,12,110	./.	1/1:30,1:31:26.78:348,27,0	0/1:15,11:27:10.19:173,0,10	1/1:17,8:27:14.34:183,14,0	0/0:15,0:25:3:0,3,27	0/0:9,0:18:17.68:0,18,165	0/0:12,0:13:6.01:0,6,56	0/0:8,0:21:18.03:0,18,174	0/0:6,0:5:3:0,3,31	0/0:1,0:2:3:0,3,28	0/0:16,0:17:8.60:0,9,93	1/1:16,11:29:4.45:81,4,0	0/1:18,4:22:66.63:106,0,67	0/1:27,19:49:72.68:682,0,73	0/0:7,0:10:9.02:0,9,116	0/0:23,0:36:22.61:0,23,183	0/0:14,0:19:29.61:0,30,249	0/1:11,0:10:43.71:59,0,44
chr10	16806955	.	G	GA	3442.70	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-10.047;DP=743;FS=6.118;HRun=8;HaplotypeScore=75.2869;InbreedingCoeff=0.9995;MQ=82.19;MQ0=0;MQRankSum=0.792;QD=27.99;ReadPosRankSum=-4.449;VQSLOD=2.1273;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:61,0:61:99:0,162,1481	0/0:14,0:14:33.01:0,33,302	0/0:23,0:23:27.01:0,27,320	0/0:23,0:23:34.51:0,35,315	0/0:15,0:17:43.08:0,43,369	0/0:21,0:21:53.98:0,54,479	0/0:34,0:34:93.03:0,93,851	1/1:1,25:26:72.15:786,72,0	0/0:38,0:38:99:0,108,985	0/0:28,0:28:60.01:0,60,546	0/0:13,0:13:32.98:0,33,293	0/0:29,0:29:81.04:0,81,741	0/0:20,0:20:54:0,54,489	0/0:38,0:38:99:0,105,961	0/0:30,0:30:87.04:0,87,793	0/0:26,0:26:69.03:0,69,631	0/0:31,0:31:87.02:0,87,790	0/0:32,0:32:86.98:0,87,788	1/1:4,20:24:63.12:689,63,0	1/1:2,21:24:56.96:623,57,0	1/1:4,27:33:83.91:929,84,0	0/0:21,0:21:54.03:0,54,494	0/0:15,0:15:39.01:0,39,356	0/0:37,0:37:99:0,108,984	1/1:2,14:15:36.11:416,36,0	0/0:33,0:33:90.51:0,91,821	0/0:23,0:23:63.03:0,63,576	0/0:13,0:13:36.01:0,36,329
chr10	16808839	.	AAG	A	90.42	PASS	AB=0.990;AC=10;AF=0.238;AN=42;BaseQRankSum=-1.302;DP=498;FS=5.044;HRun=0;HaplotypeScore=93.7584;InbreedingCoeff=0.2065;MQ=64.81;MQ0=7;MQRankSum=0.405;QD=0.61;ReadPosRankSum=0.928;VQSLOD=1.1182;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:16,9:25:15:150,15,0	0/1:3,0:3:0:0,0,0	./.	./.	./.	0/1:16,0:16:1.91:2,0,15	0/1:26,0:24:5.88:6,0,150	0/0:19,0:19:5.96:0,6,42	0/0:12,0:12:14.18:0,14,109	0/0:26,0:26:20.95:0,21,140	./.	0/0:16,0:16:8.74:0,9,95	0/0:14,0:14:8.98:0,9,73	0/0:17,0:16:2.37:0,2,9	0/0:26,0:25:9.46:0,9,75	0/1:15,1:15:19.72:20,0,95	0/0:22,0:22:17.74:0,18,126	0/0:21,0:21:16.71:0,17,161	0/0:14,0:14:2.88:0,3,15	1/1:17,0:17:0.04:2,0,0	0/0:19,0:18:0:0,0,0	0/1:17,0:21:5.31:5,0,8	./.	0/1:24,0:24:12.39:15,0,12	./.	0/0:15,0:15:10.58:0,11,67	0/0:24,0:24:15.85:0,16,122	./.
chr10	16808882	.	AGGGAGG	A	1336.46	PASS	AB=0.975;AC=23;AF=0.500;AN=46;BaseQRankSum=-3.390;DP=377;FS=23.032;HRun=0;HaplotypeScore=90.5163;InbreedingCoeff=0.1082;MQ=40.21;MQ0=58;MQRankSum=4.784;QD=6.05;ReadPosRankSum=-0.568;VQSLOD=0.0252;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:18:13.12:0,13,79	1/1:3,0:3:3.01:51,3,0	./.	./.	./.	0/1:12,0:11:14.51:15,0,98	0/0:34,0:23:5.94:0,6,329	0/1:31,0:22:58.73:59,0,309	0/1:10,0:10:10.16:10,0,54	1/1:8,9:13:25.38:184,25,0	./.	0/1:12,0:9:64.86:65,0,96	0/1:16,0:14:40.90:41,0,88	0/0:11,0:13:14.39:0,14,81	1/1:17,0:14:21.02:274,21,0	0/1:14,0:13:45.23:45,0,74	1/1:11,0:10:13.56:177,14,0	0/0:12,0:12:2.13:0,2,106	0/0:8,0:7:7.39:0,7,130	1/1:4,0:4:5.55:91,6,0	0/1:18,0:10:4.59:19,0,5	0/1:24,0:19:16.95:17,0,50	0/0:13,0:8:1.55:0,2,4	0/0:20,0:20:18.20:0,18,116	0/1:5,0:5:7.37:49,0,7	1/1:12,0:8:22.02:223,22,0	1/1:12,0:10:17.99:173,18,0	./.
chr10	16808896	.	AGAGAGAGAGAGAGAGG	A	325.75	PASS	AB=1.000;AC=11;AF=0.212;AN=52;BaseQRankSum=3.339;DP=419;FS=0.000;HRun=0;HaplotypeScore=121.4815;InbreedingCoeff=0.0947;MQ=38.27;MQ0=64;MQRankSum=-3.085;QD=2.99;ReadPosRankSum=4.617;VQSLOD=2.0001;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:17:24.23:0,24,489	0/1:5,0:4:11.55:14,0,12	0/0:8,0:2:3.73:0,4,16	0/0:26,0:2:5.81:0,6,50	0/0:8,0:6:5.99:0,6,51	0/0:25,0:24:33.62:0,34,700	0/0:37,0:23:30:0,30,677	1/1:26,0:15:0.59:100,1,0	0/1:11,0:10:3.48:3,0,182	0/0:10,0:6:7.47:0,7,67	./.	0/0:15,0:12:21.87:0,22,436	0/0:16,0:14:26.70:0,27,448	0/0:16,0:14:14.88:0,15,263	0/1:12,0:9:38:38,0,39	0/0:15,0:14:7.85:0,8,198	0/1:11,0:9:12.34:12,0,14	0/0:21,0:19:18.51:0,19,296	1/1:5,7:10:25.04:231,25,0	./.	0/1:14,0:8:3.90:4,0,21	0/0:30,0:25:6.35:0,6,368	0/0:19,0:14:6.96:0,7,120	0/0:25,0:22:18.44:0,18,492	0/1:9,0:7:8.78:17,0,9	0/1:9,0:6:43.29:43,0,70	0/0:5,0:4:10.20:0,10,75	0/0:6,0:3:6:0,6,51
chr10	16808912	.	GGA	G	211.85	PASS	AB=0.989;AC=9;AF=0.161;AN=56;BaseQRankSum=2.473;DP=510;FS=0.000;HRun=0;HaplotypeScore=86.0154;InbreedingCoeff=0.2826;MQ=48.07;MQ0=66;MQRankSum=-0.181;QD=1.77;ReadPosRankSum=2.402;VQSLOD=1.0589;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:18:27.09:0,27,383	0/0:9,0:8:5.93:0,6,52	0/0:24,0:9:6.48:0,6,139	0/0:48,0:8:18.66:0,19,144	0/0:13,0:11:0.58:0,1,24	0/0:29,0:28:10.97:0,11,600	0/0:32,0:21:2.63:0,3,506	0/0:33,0:24:7.93:0,8,76	0/0:13,0:12:15.05:0,15,224	0/0:16,0:12:6.18:0,6,57	0/0:3,0:1:3:0,3,25	0/0:14,0:12:21.07:0,21,328	0/1:12,0:10:22.25:22,0,117	0/0:13,0:11:13.27:0,13,182	0/0:18,0:15:10.41:0,10,79	1/1:5,11:15:15.04:177,15,0	0/0:16,0:14:9.44:0,9,73	1/1:8,12:19:8.04:106,8,0	0/0:11,0:8:0.47:0,0,1	0/0:4,0:3:3:0,3,25	1/1:24,0:17:0.35:1,0,0	0/0:34,0:29:12.15:0,12,645	0/1:19,0:14:23.96:24,0,125	0/1:27,1:25:6.42:6,0,387	0/0:9,0:7:0.65:0,1,2	0/0:14,0:11:6.71:0,7,49	0/0:8,0:7:6.69:0,7,49	0/0:8,0:5:0.94:0,1,2
chr10	16809555	.	A	ACAT	11619.23	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-12.504;DP=600;FS=18.039;HRun=0;HaplotypeScore=85.7795;InbreedingCoeff=0.9683;MQ=97.54;MQ0=0;MQRankSum=-7.382;QD=45.57;ReadPosRankSum=-1.341;VQSLOD=4.9300;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:78.27:0,78,1252	1/1:0,3:3:9.03:198,9,0	0/0:33,0:33:75.23:0,75,1154	0/0:30,0:30:75.25:0,75,1168	1/1:3,10:13:30.10:662,30,0	0/0:13,0:13:33.11:0,33,530	0/0:30,0:30:87.28:0,87,1373	1/1:4,20:25:66.23:1378,66,0	0/0:25,0:25:66.23:0,66,1060	1/1:2,12:15:39.12:815,39,0	1/1:3,3:7:6.02:132,6,0	0/0:39,0:39:99:0,117,1850	0/0:25,0:25:69.24:0,69,1109	0/0:25,0:25:72.24:0,72,1154	1/1:3,32:37:81.28:1784,81,0	0/0:30,0:29:84.29:0,84,1348	1/1:2,27:31:60.21:1322,60,0	0/0:26,0:26:69.24:0,69,1109	1/1:6,15:22:54.17:1123,54,0	1/1:2,6:9:15.05:331,15,0	1/1:2,34:37:59.77:1320,60,0	0/0:9,0:9:24.08:0,24,380	0/0:4,0:4:12.04:0,12,191	0/0:29,0:29:81.28:0,81,1294	1/1:2,9:11:15.05:331,15,0	1/1:4,13:17:42.14:925,42,0	1/1:6,14:20:39.13:840,39,0	1/1:1,6:8:21.07:458,21,0
chr10	16811953	.	C	CGG	1974.40	PASS	AB=0.711;AC=44;AF=0.786;AN=56;BaseQRankSum=7.679;DP=587;FS=3.849;HRun=9;HaplotypeScore=145.5931;InbreedingCoeff=0.5466;MQ=73.22;MQ0=0;MQRankSum=-4.432;QD=3.86;ReadPosRankSum=-4.223;VQSLOD=-0.7596;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:45:37.81:145,38,0	1/1:8,0:8:8.33:43,8,0	0/0:12,0:12:20.18:0,20,203	0/0:14,0:14:28.64:0,29,300	1/1:11,0:11:2.26:7,2,0	0/1:9,0:18:16.45:28,0,16	1/1:6,1:27:32.95:149,33,0	1/1:17,0:18:0.89:2,1,0	1/1:6,0:29:25.39:98,25,0	1/1:20,0:20:21.47:119,21,0	1/1:10,0:10:2.26:8,2,0	1/1:6,0:29:20.06:70,20,0	0/1:8,0:33:4.35:58,0,4	0/1:11,1:31:10.55:57,0,11	1/1:20,5:26:29.72:313,30,0	0/0:24,0:24:45.02:0,45,479	1/1:14,6:22:8.93:75,9,0	0/0:25,0:26:59.83:0,60,617	1/1:11,1:13:17.79:153,18,0	0/1:4,0:4:0:0,0,0	1/1:25,1:26:11.01:95,11,0	1/1:11,0:21:16.64:72,17,0	1/1:6,0:19:5.43:34,5,0	1/1:10,0:37:25.56:154,26,0	1/1:12,0:12:15.69:136,16,0	1/1:18,1:20:16.90:126,17,0	1/1:20,0:20:17.58:133,18,0	1/1:10,1:11:5.98:64,6,0
chr10	16811963	.	AGT	A	2239.07	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=0.426;DP=477;FS=24.972;HRun=0;HaplotypeScore=73.9612;InbreedingCoeff=0.8863;MQ=75.43;MQ0=0;MQRankSum=-1.909;QD=15.44;ReadPosRankSum=-7.848;VQSLOD=0.2776;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:84.26:0,84,1330	1/1:7,0:7:10.65:100,11,0	0/0:10,0:10:28.91:0,29,468	0/0:14,0:14:41.50:0,42,652	1/1:5,0:5:6.48:70,6,0	0/0:17,0:17:36.11:0,36,557	0/0:27,0:27:60.20:0,60,1031	1/1:1,15:16:43.02:582,43,0	0/0:30,0:30:44.58:0,45,649	1/1:12,0:12:28.76:282,29,0	1/1:3,1:4:8.70:75,9,0	0/0:25,0:25:30.08:0,30,454	0/0:33,0:33:48.42:0,48,622	0/0:25,0:25:35.33:0,35,553	1/1:20,0:19:16.75:223,17,0	0/0:23,0:23:69.21:0,69,1213	1/1:11,0:11:2.55:42,3,0	0/0:24,0:24:72.25:0,72,1280	1/1:10,0:10:21.40:190,21,0	1/1:2,0:2:2.68:43,3,0	1/1:21,0:21:29.32:317,29,0	0/0:17,0:17:36.09:0,36,560	0/0:15,0:15:11.44:0,11,203	0/0:32,0:32:74.98:0,75,1200	1/1:8,0:8:13.69:101,14,0	1/1:14,1:15:38.63:313,39,0	1/1:10,0:10:7.60:57,8,0	1/1:4,0:4:5.79:62,6,0
chr10	16812915	.	G	GGTCCATCGTCC	36920.55	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=-7.948;DP=703;FS=12.036;HRun=0;HaplotypeScore=203.4081;InbreedingCoeff=0.9825;MQ=70.90;MQ0=0;MQRankSum=-17.331;QD=99.52;ReadPosRankSum=-1.590;VQSLOD=3.7711;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,150,4791	1/1:3,8:15:30.06:1542,30,0	0/0:22,0:22:51.01:0,51,1219	0/0:12,0:12:24.08:0,24,753	1/1:2,8:21:15.05:848,15,0	0/0:21,0:21:60.19:0,60,1968	0/0:33,0:33:93.28:0,93,2885	1/1:14,4:33:90.26:3326,90,0	0/0:25,0:25:75.24:0,75,2399	1/1:6,17:29:78.23:3974,78,0	1/1:10,10:26:24.08:1359,24,0	0/0:39,0:39:99:0,111,3357	0/0:32,0:32:90.31:0,90,2965	0/0:24,0:24:69.22:0,69,2207	1/1:24,16:41:96.30:4434,96,0	1/1:7,0:28:72.18:3378,72,0	1/1:13,4:17:36.08:1574,36,0	1/1:6,0:16:30.10:1492,30,0	1/1:5,3:15:36.11:1527,36,0	1/1:10,18:32:69.24:3871,69,0	1/1:22,3:25:45.05:1416,45,0	0/0:35,0:35:99:0,102,3323	0/0:19,0:19:57.20:0,57,1984	0/0:16,0:16:48.13:0,48,1409	1/1:5,8:17:33.11:1712,33,0	1/1:10,11:27:66.18:3018,66,0	1/1:11,13:23:66.18:3111,66,0	1/1:1,1:5:6.02:337,6,0
chr10	16813014	.	CAGATTT	C	12960.03	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=15.469;DP=686;FS=8.730;HRun=0;HaplotypeScore=159.5172;InbreedingCoeff=0.9824;MQ=74.21;MQ0=0;MQRankSum=-16.072;QD=35.22;ReadPosRankSum=2.113;VQSLOD=3.8607;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:40:99:0,99,3317	1/1:3,15:18:36.02:701,36,0	0/0:27,0:27:57.10:0,57,1639	0/0:18,0:18:44.74:0,45,1310	1/1:2,38:40:33.06:646,33,0	0/0:17,0:17:45.11:0,45,1451	0/0:22,0:22:54.19:0,54,1808	1/1:12,21:33:63.20:1271,63,0	0/0:24,0:24:63.22:0,63,2130	1/1:2,23:25:69.21:1423,69,0	1/1:0,18:18:27.09:595,27,0	0/0:24,0:24:60.21:0,60,1893	0/0:30,0:30:72.24:0,72,2326	0/0:30,0:30:84.29:0,84,2745	1/1:3,24:27:51.60:1080,52,0	1/1:8,19:27:39.13:860,39,0	1/1:4,10:14:22.32:526,22,0	1/1:5,16:21:27.09:595,27,0	1/1:11,14:25:42.12:814,42,0	1/1:7,18:25:42.14:900,42,0	1/1:9,8:17:7.01:166,7,0	0/0:32,0:32:90.27:0,90,2894	0/0:33,0:33:81.28:0,81,2724	0/0:20,0:20:54.19:0,54,1799	1/1:3,20:23:39.09:814,39,0	1/1:5,19:24:57.20:1255,57,0	1/1:5,20:25:51.17:1098,51,0	1/1:0,6:6:11.56:218,12,0
chr10	16813934	.	C	CCTGT	22882.59	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-6.087;DP=765;FS=18.999;HRun=0;HaplotypeScore=135.0182;InbreedingCoeff=0.9946;MQ=91.70;MQ0=0;MQRankSum=-12.762;QD=67.30;ReadPosRankSum=0.040;VQSLOD=5.2333;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,99,1892	1/1:1,13:14:36.12:992,36,0	0/0:33,0:33:90.26:0,90,1645	0/0:36,0:36:96.27:0,96,1749	1/1:0,15:15:39.13:1089,39,0	0/0:20,0:20:60.17:0,60,1127	0/0:30,0:30:87.30:0,87,1725	1/1:8,22:32:87.26:2297,87,0	0/0:29,0:29:84.25:0,84,1573	1/1:1,32:33:99:2716,99,0	1/1:2,11:14:18.06:498,18,0	0/0:38,0:38:99:0,108,2112	0/0:39,0:39:99:0,117,2200	0/0:33,0:33:93.31:0,93,1822	1/1:6,32:40:84.29:2346,84,0	0/0:33,0:33:93.30:0,93,1790	1/1:3,25:28:72.25:2008,72,0	0/0:31,0:31:93.32:0,93,1844	1/1:5,13:19:51.17:1254,51,0	1/1:2,16:19:48.16:1328,48,0	1/1:3,43:47:99:2847,101,0	0/0:25,0:25:75.25:0,75,1449	0/0:12,0:12:33.09:0,33,622	0/0:29,0:29:81.28:0,81,1605	1/1:2,14:16:30.10:838,30,0	1/1:5,26:31:90.27:2388,90,0	1/1:2,25:27:72.20:1947,72,0	1/1:0,5:5:12.04:335,12,0
chr10	16817022	.	CT	C	4617.47	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=17.983;DP=647;FS=20.057;HRun=7;HaplotypeScore=101.0916;InbreedingCoeff=0.9935;MQ=76.29;MQ0=0;MQRankSum=-1.760;QD=26.54;ReadPosRankSum=2.522;VQSLOD=3.4160;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,126,1584	1/1:2,4:6:12.03:122,12,0	0/0:18,0:18:39.10:0,39,454	0/0:11,0:11:18.26:0,18,202	1/1:2,19:21:48.10:489,48,0	0/0:24,0:24:66.21:0,66,828	0/0:22,0:22:60.18:0,60,743	0/0:39,0:39:90.29:0,90,1132	0/0:22,0:22:63.20:0,63,792	1/1:3,18:21:54.12:549,54,0	1/1:1,13:14:30.06:306,30,0	0/0:32,0:32:87.28:0,87,1093	0/0:25,0:25:72.19:0,72,866	0/0:30,0:30:87.27:0,87,1080	1/1:0,24:24:72.16:735,72,0	0/0:23,0:23:66.20:0,66,817	1/1:0,26:26:75.17:765,75,0	0/0:27,0:28:78.12:0,78,957	0/0:25,0:25:60.16:0,60,718	0/0:20,0:20:57.18:0,57,717	0/0:22,0:22:54.15:0,54,652	0/0:18,0:18:54.16:0,54,666	0/0:20,0:20:60.19:0,60,754	0/0:23,0:23:66.21:0,66,830	0/0:26,0:26:66.20:0,66,819	1/1:1,20:21:60.14:612,60,0	1/1:1,28:29:78.05:795,78,0	1/1:1,11:12:24.05:245,24,0
chr10	16817161	.	AC	A	4171.56	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=11.694;DP=728;FS=5.574;HRun=6;HaplotypeScore=77.6834;InbreedingCoeff=0.9901;MQ=83.28;MQ0=0;MQRankSum=-0.269;QD=25.75;ReadPosRankSum=2.858;VQSLOD=3.9628;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,117,1508	1/1:0,4:4:12.03:129,12,0	0/0:24,0:24:60.14:0,60,737	0/0:23,1:23:44.99:0,45,662	1/1:1,20:21:29.96:306,30,0	0/0:16,0:16:42.14:0,42,550	0/0:39,0:39:99:0,102,1297	0/0:40,0:40:99:0,99,1267	0/0:30,0:30:75.24:0,75,973	1/1:4,19:23:60.15:644,60,0	1/1:1,14:15:33.55:355,34,0	0/0:37,0:37:99:0,111,1442	0/0:26,0:26:78.24:0,78,1013	0/0:27,0:27:75.21:0,75,956	1/1:1,20:21:54.14:580,54,0	0/0:31,0:31:90.28:0,90,1162	1/1:0,30:30:84.21:903,84,0	0/0:24,0:24:72.23:0,72,940	0/0:24,0:24:63.20:0,63,828	0/0:14,0:14:36.09:0,36,443	0/0:65,0:65:99:0,187,2432	0/0:22,0:22:63.19:0,63,811	0/0:17,0:17:45.12:0,45,560	0/0:50,0:50:99:0,141,1838	0/0:14,0:14:36.09:0,36,454	1/1:1,17:18:51.13:547,51,0	1/1:4,18:22:53.79:579,54,0	1/1:3,5:8:12.03:129,12,0
chr10	16817395	.	C	CT	8006.97	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-3.240;DP=693;FS=4.761;HRun=1;HaplotypeScore=77.3353;InbreedingCoeff=0.9987;MQ=83.11;MQ0=0;MQRankSum=-1.171;QD=39.06;ReadPosRankSum=2.402;VQSLOD=5.6498;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,105,1302	1/1:0,8:9:21.07:308,21,0	0/0:20,0:20:57.13:0,57,683	0/0:28,0:27:56.03:0,56,636	1/1:0,18:18:51.17:764,51,0	0/0:25,0:25:75.24:0,75,973	0/0:39,0:39:93.01:0,93,1254	0/0:33,0:33:99:0,99,1255	0/0:22,0:22:57.17:0,57,725	1/1:1,22:23:63.19:921,63,0	1/1:0,17:17:48.16:719,48,0	0/0:28,0:28:84.27:0,84,1089	0/0:16,0:16:48.16:0,48,622	0/0:22,0:22:66.21:0,66,843	1/1:1,33:34:84.28:1257,84,0	0/0:30,0:30:90.26:0,90,1128	1/1:1,46:47:99:1662,111,0	0/0:30,0:30:90.23:0,90,1118	0/0:16,0:16:42.09:0,42,528	0/0:21,0:21:57.18:0,57,738	0/0:36,0:36:99:0,102,1310	0/0:14,0:14:39.13:0,39,506	0/0:18,0:18:48.14:0,48,607	0/0:26,0:26:75.21:0,75,956	0/0:28,0:28:84.26:0,84,1075	1/1:0,27:27:78.23:1126,78,0	1/1:2,21:23:63.21:935,63,0	1/1:0,7:7:21.07:315,21,0
chr10	16817524	.	A	AAAAAC	10250.38	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-12.865;DP=737;FS=7.393;HRun=0;HaplotypeScore=130.1897;InbreedingCoeff=0.9762;MQ=71.03;MQ0=0;MQRankSum=-2.295;QD=45.56;ReadPosRankSum=0.568;VQSLOD=4.7713;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,105,1872	1/1:6,4:11:15.05:415,15,0	0/0:32,0:24:20.24:0,20,290	0/0:26,0:16:19.26:0,19,330	1/1:10,21:32:57.19:1415,57,0	0/0:19,0:19:51.17:0,51,942	0/0:34,0:34:84.29:0,84,1549	0/0:25,0:25:39.09:0,39,629	0/0:26,0:26:66.20:0,66,1161	1/1:7,15:23:45.07:1179,45,0	1/1:14,3:17:8.99:191,9,0	0/0:35,0:35:81.28:0,81,1500	0/0:26,0:26:69.24:0,69,1277	0/0:23,0:23:51.17:0,51,914	1/1:14,24:41:13.45:1828,13,0	0/0:30,0:30:57.17:0,57,972	1/1:12,22:36:51.18:1456,51,0	0/0:27,0:27:57.13:0,57,1016	0/0:17,0:17:24.08:0,24,438	0/0:19,0:19:39.10:0,39,661	0/0:25,0:25:66.22:0,66,1175	0/0:31,0:31:87.28:0,87,1586	0/0:7,0:7:12.03:0,12,194	0/0:47,0:47:99:0,108,1840	0/0:18,0:18:24.03:0,24,403	1/1:7,25:35:84.25:2141,84,0	1/1:6,13:22:39.13:1113,39,0	1/1:2,6:8:18.06:514,18,0
chr10	16818177	.	G	GA	4152	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=8.181;DP=711;FS=0.711;HRun=11;HaplotypeScore=99.2261;InbreedingCoeff=0.9322;MQ=71.94;MQ0=0;MQRankSum=-1.917;QD=18.87;ReadPosRankSum=-1.631;VQSLOD=3.3357;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:41:81.99:0,82,692	1/1:1,5:6:11.98:111,12,0	0/0:18,0:16:12.96:0,13,72	0/0:15,0:15:3.32:0,3,66	1/1:6,16:23:28.55:439,29,0	0/0:25,0:25:56.74:0,57,438	0/0:17,1:19:16.36:0,16,293	0/0:42,0:45:53.39:0,53,563	0/0:19,0:20:45.82:0,46,331	1/1:7,15:23:24.66:398,25,0	1/1:4,21:26:57:546,57,0	0/0:31,0:31:52.84:0,53,589	0/0:23,0:25:66.75:0,67,487	0/0:28,1:29:41.20:0,41,484	1/1:6,18:24:4.66:410,5,0	0/0:38,0:41:92.37:0,92,678	1/1:5,39:49:98.69:951,99,0	0/0:20,0:22:23.54:0,24,306	0/0:23,1:28:46.57:0,47,483	0/0:26,0:27:64.75:0,65,490	0/0:22,0:27:57.80:0,58,425	0/0:19,0:19:35.77:0,36,274	0/0:17,0:17:24.76:0,25,187	0/0:23,0:24:52.80:0,53,398	0/0:15,0:17:48.84:0,49,353	1/1:3,20:27:48.20:591,48,0	1/1:7,29:35:42.85:615,43,0	1/1:3,3:6:9.02:91,9,0
chr10	16819839	.	C	CTTTGT	9354.44	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=4.622;DP=567;FS=12.558;HRun=0;HaplotypeScore=101.6428;InbreedingCoeff=0.9746;MQ=75.94;MQ0=0;MQRankSum=-9.731;QD=46.08;ReadPosRankSum=-0.013;VQSLOD=4.4734;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:75.19:0,75,1334	1/1:3,5:8:9.03:261,9,0	0/0:24,0:24:23.75:0,24,380	0/0:15,0:13:12.03:0,12,169	1/1:6,22:30:57.20:1543,57,0	0/0:17,0:17:36.07:0,36,607	0/0:14,0:14:36.12:0,36,677	0/0:35,0:35:69.21:0,69,1218	0/0:15,0:15:30.10:0,30,571	1/1:11,10:26:45.12:1102,45,0	1/1:2,18:21:48.08:1212,48,0	0/0:14,0:14:36.11:0,36,637	0/0:22,0:22:54.16:0,54,944	0/0:14,0:14:33.11:0,33,619	1/1:5,13:19:33.07:861,33,0	0/0:23,0:23:60.21:0,60,1142	1/1:8,19:28:43.03:1168,43,0	0/0:17,0:17:45.06:0,45,749	0/0:20,0:20:33.10:0,33,569	0/0:23,0:23:60.19:0,60,1110	0/0:16,0:16:27.09:0,27,514	0/0:8,0:8:18.06:0,18,343	0/0:16,0:16:36.10:0,36,621	0/0:16,0:16:27.09:0,27,504	0/0:20,0:20:48.11:0,48,815	1/1:8,27:37:78.23:2017,78,0	1/1:2,17:19:33.11:929,33,0	1/1:4,10:15:9.03:261,9,0
chr10	16820011	.	CT	C	2396.46	PASS	AB=0.939;AC=20;AF=0.357;AN=56;BaseQRankSum=1.666;DP=566;FS=4.109;HRun=11;HaplotypeScore=82.8032;InbreedingCoeff=0.8165;MQ=64.33;MQ0=9;MQRankSum=1.804;QD=12.88;ReadPosRankSum=3.343;VQSLOD=3.9519;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:38,1:40:66.36:0,66,906	0/0:7,0:6:15.04:0,15,160	0/1:17,1:8:8.18:8,0,99	0/1:25,2:16:9.71:10,0,81	0/0:24,0:24:57.08:0,57,582	1/1:3,19:22:53.93:443,54,0	1/1:2,20:22:53.91:443,54,0	0/0:27,1:30:34.95:0,35,528	1/1:2,10:12:26.96:222,27,0	0/0:24,0:24:51.13:0,51,542	0/0:17,1:17:14.86:0,15,328	1/1:1,14:17:40.03:307,40,0	1/1:2,17:20:43.99:351,44,0	1/1:3,6:9:17.01:129,17,0	0/0:19,0:20:27.17:0,27,470	0/0:22,1:23:0.04:0,0,390	0/0:38,2:41:30.31:0,30,768	0/0:27,0:27:29.97:0,30,403	0/0:19,0:19:42.09:0,42,438	0/0:19,0:19:48.10:0,48,495	0/0:11,0:11:24.06:0,24,256	1/1:1,7:8:20.97:172,21,0	1/1:1,10:12:22.88:178,23,0	1/1:2,16:16:41.94:345,42,0	0/0:13,1:14:29.96:0,30,296	0/0:17,0:18:44.73:0,45,436	0/0:22,0:22:36.15:0,36,542	0/0:21,0:21:57.08:0,57,581
chr10	16821885	.	GT	G	8178.69	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=15.741;DP=806;FS=1.984;HRun=3;HaplotypeScore=80.4672;InbreedingCoeff=0.9992;MQ=74.51;MQ0=0;MQRankSum=-2.587;QD=33.38;ReadPosRankSum=3.112;VQSLOD=5.4663;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:60,0:60:99:0,174,2421	1/1:0,9:9:27.08:334,27,0	0/0:17,0:17:51.17:0,51,699	0/0:15,0:15:39.02:0,39,470	1/1:0,32:32:90.28:1112,90,0	0/0:19,0:19:54.18:0,54,777	0/0:35,0:35:99:0,105,1512	0/0:25,0:25:75.18:0,75,1055	0/0:18,0:18:54.18:0,54,777	1/1:1,37:38:99:1249,102,0	1/1:0,20:20:48.01:594,48,0	0/0:33,0:33:99:0,99,1404	0/0:29,0:29:84.27:0,84,1191	0/0:37,0:37:99:0,108,1553	1/1:0,31:31:84.26:1041,84,0	0/0:39,0:39:99:0,114,1626	1/1:2,32:34:90.28:1116,90,0	0/0:37,0:37:99:0,108,1543	0/0:24,0:24:66.22:0,66,950	0/0:16,0:16:48.14:0,48,655	0/0:80,0:80:99:0,226,3201	0/0:14,0:14:42.14:0,42,593	0/0:12,0:12:36.12:0,36,518	0/0:35,0:35:99:0,102,1428	0/0:16,0:16:45.15:0,45,648	1/1:2,43:45:86.22:1504,86,0	1/1:1,26:27:78.25:967,78,0	1/1:1,8:9:21.05:260,21,0
chr10	16822594	.	AATACATAC	A	12660.11	PASS	AB=0.801;AC=40;AF=0.769;AN=52;BaseQRankSum=-6.430;DP=801;FS=3.458;HRun=0;HaplotypeScore=218.7662;InbreedingCoeff=0.7148;MQ=63.88;MQ0=19;MQRankSum=-8.883;QD=21.79;ReadPosRankSum=0.678;VQSLOD=4.3025;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:23,7:30:65.80:211,0,66	1/1:6,5:11:8.90:223,9,0	./.	./.	1/1:18,10:28:17.93:351,18,0	1/1:11,15:25:33.07:764,33,0	0/1:28,10:38:9.57:497,0,10	0/0:41,0:41:21.07:0,21,358	1/1:12,10:22:27.09:670,27,0	1/1:19,19:38:54.17:1225,54,0	1/1:12,8:20:20.61:402,21,0	1/1:19,18:37:42.14:1042,42,0	1/1:20,20:40:42.14:1042,42,0	1/1:19,14:34:39.13:949,39,0	1/1:23,15:38:33.11:819,33,0	1/1:15,16:31:36.12:893,36,0	1/1:15,3:18:12.03:248,12,0	1/1:18,5:24:9.03:205,9,0	0/0:16,0:18:8.98:0,9,73	0/0:17,0:29:35.94:0,36,326	0/0:19,0:29:35.97:0,36,376	1/1:10,12:22:18.06:408,18,0	1/1:12,11:23:14.50:372,14,0	1/1:18,8:26:8.70:223,9,0	0/0:12,0:34:68.75:0,69,586	1/1:20,15:35:45.12:1014,45,0	1/1:14,17:31:45.03:954,45,0	1/1:6,3:8:6.02:149,6,0
chr10	16826848	.	TGCGCGCGCGC	T	1586.36	PASS	AB=0.980;AC=20;AF=0.357;AN=56;BaseQRankSum=4.996;DP=458;FS=0.724;HRun=0;HaplotypeScore=142.9118;InbreedingCoeff=0.3771;MQ=58.56;MQ0=2;MQRankSum=-7.193;QD=7.02;ReadPosRankSum=-3.216;VQSLOD=1.6083;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:30:0.29:53,0,0	0/0:9,0:9:24.07:0,24,496	0/0:5,0:4:3.01:0,3,55	0/1:11,0:6:0.82:1,0,25	0/0:17,0:17:26.63:0,27,684	1/1:18,0:19:6.02:131,6,0	0/1:32,3:37:40.07:316,0,40	0/0:31,0:31:9:0,9,165	1/1:10,0:10:11.97:200,12,0	0/0:18,0:17:36.12:0,36,894	0/0:15,0:15:26.62:0,27,559	0/1:20,0:20:40.47:56,0,40	0/1:18,0:18:6.93:210,0,7	0/1:15,0:15:33.92:175,0,34	0/0:8,0:8:15.05:0,15,373	1/1:16,0:16:9.03:231,9,0	0/0:32,0:32:54.08:0,54,1346	1/1:3,8:13:12.04:330,12,0	0/0:8,0:9:6.01:0,6,144	0/0:8,0:8:12.03:0,12,320	0/0:16,0:16:21.07:0,21,582	1/1:14,0:14:0.47:1,0,0	0/1:11,0:11:10.13:10,0,16	1/1:12,0:11:2.80:40,3,0	0/0:21,0:21:33.11:0,33,1018	0/0:17,0:17:45.08:0,45,902	0/0:14,0:14:12.51:0,13,271	0/0:12,0:12:20.20:0,20,653
chr10	16826861	.	GCGCGCGCGCGCA	G	1782.92	PASS	AB=0.997;AC=19;AF=0.339;AN=56;BaseQRankSum=5.191;DP=481;FS=0.000;HRun=0;HaplotypeScore=135.6963;InbreedingCoeff=0.3238;MQ=54.92;MQ0=13;MQRankSum=-7.475;QD=7.16;ReadPosRankSum=2.839;VQSLOD=2.4708;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:35,0:35:5.98:77,6,0	0/0:13,0:13:24.37:0,24,521	0/0:2,0:1:3.01:0,3,55	0/1:7,0:3:0.82:1,0,25	0/0:18,0:18:26.63:0,27,757	1/1:20,0:19:6.91:161,7,0	0/1:43,0:43:40.49:329,0,40	0/0:10,0:9:9.01:0,9,165	1/1:11,0:11:12.04:242,12,0	0/0:23,0:21:54.18:0,54,1258	0/0:15,0:15:26.58:0,27,599	0/1:21,0:21:40.47:70,0,40	0/1:14,0:14:6.92:273,0,7	0/1:20,0:19:34.25:189,0,34	0/0:6,0:6:15.05:0,15,398	1/1:3,13:16:9.50:312,10,0	0/0:39,0:39:60.11:0,60,1676	0/1:16,0:15:75.47:218,0,75	0/0:7,0:6:14.90:0,15,244	0/0:10,0:10:12.03:0,12,320	0/0:19,0:17:21.07:0,21,592	1/1:17,0:17:0.47:1,0,0	0/1:13,0:13:15.55:24,0,16	1/1:14,0:12:2.82:54,3,0	0/0:22,0:22:33.11:0,33,1018	0/0:17,0:17:50.77:0,51,1039	0/0:15,0:15:21.37:0,21,415	0/0:16,0:15:22.99:0,23,749
chr10	16826863	.	GCGCGCGCGCACACA	G	2424.77	PASS	AB=1.000;AC=23;AF=0.426;AN=54;BaseQRankSum=1.795;DP=466;FS=1.604;HRun=0;HaplotypeScore=134.6413;InbreedingCoeff=0.6959;MQ=53.49;MQ0=13;MQRankSum=-6.460;QD=10.54;ReadPosRankSum=2.925;VQSLOD=2.5852;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:3,33:36:4.57:58,5,0	0/0:13,0:13:21.40:0,21,408	0/0:2,0:1:3.01:0,3,66	./.	0/0:17,0:17:19.24:0,19,658	1/1:6,15:20:6.91:258,7,0	1/1:8,32:39:21.05:506,21,0	0/0:12,0:11:6:0,6,95	1/1:2,9:10:12.04:356,12,0	0/0:23,0:21:53.15:0,53,1166	0/0:14,0:14:17.64:0,18,455	1/1:4,14:19:3.48:130,3,0	1/1:3,11:14:15.05:526,15,0	1/1:2,16:17:8.61:283,9,0	0/0:6,0:6:15.02:0,15,321	1/1:14,1:15:9.50:233,10,0	0/0:39,0:39:55.76:0,56,1531	0/1:15,0:14:77.46:77,0,253	0/0:7,0:6:8.77:0,9,143	0/0:10,0:10:9.03:0,9,220	0/0:19,0:17:20.92:0,21,445	1/1:4,9:13:0.47:1,0,0	1/1:3,11:14:3.01:75,3,0	1/1:4,10:12:2.70:106,3,0	0/0:20,0:20:33.06:0,33,763	0/0:17,0:17:44.42:0,44,862	0/0:15,0:15:21.51:0,22,395	0/0:16,0:15:23.34:0,23,799
chr10	16826871	.	GCACACA	G	636.74	PASS	AB=0.976;AC=21;AF=0.457;AN=46;BaseQRankSum=5.729;DP=461;FS=0.995;HRun=0;HaplotypeScore=106.7348;InbreedingCoeff=0.5889;MQ=51.12;MQ0=15;MQRankSum=-4.867;QD=2.98;ReadPosRankSum=-0.136;VQSLOD=2.1284;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:40,0:41:4.43:15,0,4	0/0:10,0:14:3.42:0,3,74	./.	./.	0/0:17,0:17:12.02:0,12,191	1/1:20,0:20:6.02:100,6,0	1/1:41,0:39:8.93:109,9,0	0/0:15,0:13:1.36:0,1,3	1/1:11,0:10:9.03:133,9,0	0/0:26,0:24:30.09:0,30,535	0/0:14,0:14:6.02:0,6,115	1/1:18,0:17:3.01:51,3,0	1/1:12,0:12:14.15:161,14,0	1/1:17,0:16:2.71:50,3,0	0/0:2,0:2:3.01:0,3,72	1/1:15,0:15:8.69:79,9,0	0/0:38,0:38:22.30:0,22,445	0/0:18,0:17:24.55:0,25,399	0/0:8,0:7:0.89:0,1,2	./.	./.	1/1:11,0:12:0.47:1,0,0	1/1:13,0:13:2.44:37,2,0	1/1:13,0:11:2.86:54,3,0	./.	0/0:17,0:17:18.04:0,18,363	0/0:13,0:13:12.02:0,12,171	0/0:17,0:16:15.03:0,15,300
chr10	16826890	.	C	CAT	1544.40	PASS	AB=0.577;AC=14;AF=0.250;AN=56;BaseQRankSum=-0.063;DP=533;FS=1.340;HRun=0;HaplotypeScore=99.6753;InbreedingCoeff=0.4633;MQ=50.53;MQ0=19;MQRankSum=5.768;QD=8.77;ReadPosRankSum=2.841;VQSLOD=3.5583;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:20.94:0,21,166	1/1:13,1:14:3.36:144,3,0	0/0:4,0:2:5.98:0,6,62	0/0:11,0:3:8.96:0,9,70	0/1:6,17:23:15.21:85,0,15	0/0:19,0:18:8.71:0,9,81	0/0:38,0:36:24.89:0,25,167	0/0:30,0:27:77.11:0,77,563	0/0:17,0:16:26.94:0,27,223	1/1:5,18:21:38.39:403,38,0	0/1:5,10:16:21.78:102,0,22	0/0:21,0:20:6:0,6,52	0/0:13,0:13:17.86:0,18,142	0/0:20,0:19:20.88:0,21,168	0/1:1,4:5:4.56:52,0,5	0/0:15,0:15:15.01:0,15,140	1/1:5,29:38:0.58:259,1,0	0/0:17,0:16:28.33:0,28,212	0/0:9,0:8:12.59:0,13,78	0/0:13,0:13:2.99:0,3,24	0/0:20,0:17:8.82:0,9,72	0/0:16,0:15:8.93:0,9,74	0/0:18,0:18:8.98:0,9,77	0/0:13,0:11:3:0,3,26	0/0:14,0:14:8.92:0,9,67	1/1:6,15:21:20.80:382,21,0	0/1:5,12:17:2.88:29,0,3	1/1:2,17:18:15:254,15,0
chr10	16827533	.	G	GTT	35192.03	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-3.554;DP=743;FS=2.267;HRun=0;HaplotypeScore=92.0055;InbreedingCoeff=0.9633;MQ=87.82;MQ0=0;MQRankSum=-7.354;QD=55.77;ReadPosRankSum=4.469;VQSLOD=5.4348;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,54:54:99:3086,154,0	1/1:0,2:2:6.02:122,6,0	0/0:29,0:29:75.25:0,75,1186	0/0:24,0:24:64.66:0,65,970	1/1:0,15:16:42.11:813,42,0	1/1:0,19:19:57.20:1158,57,0	1/1:2,34:36:96.33:1928,96,0	1/1:3,35:39:99:2258,114,0	1/1:1,35:36:99:2129,105,0	1/1:1,13:15:39.13:782,39,0	1/1:2,13:16:42.10:812,42,0	1/1:0,26:28:75.26:1523,75,0	1/1:1,29:32:87.30:1768,87,0	1/1:0,35:36:99:2005,99,0	1/1:1,48:50:99:2803,138,0	0/0:34,0:34:99:0,99,1565	1/1:0,36:39:99:2012,99,0	0/0:24,1:25:13.04:0,13,1030	1/1:1,19:22:63.20:1244,63,0	1/1:1,13:14:42.06:744,42,0	1/1:1,37:40:99:2073,102,0	1/1:0,16:16:48.08:870,48,0	1/1:0,12:12:36.12:732,36,0	1/1:1,29:31:87.30:1768,87,0	1/1:0,20:20:57.20:1159,57,0	1/1:0,27:27:81.28:1635,81,0	1/1:1,23:23:66.23:1340,66,0	1/1:0,7:7:21.07:427,21,0
chr10	16828846	.	G	GGGTA	15302.39	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=18.446;DP=1235;FS=0.250;HRun=0;HaplotypeScore=234.3183;InbreedingCoeff=0.9985;MQ=66.92;MQ0=9;MQRankSum=-2.559;QD=36.78;ReadPosRankSum=7.906;VQSLOD=4.3679;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,160,3224	1/1:1,0:11:18.04:337,18,0	0/0:52,0:44:99:0,122,2083	0/0:66,0:56:99:0,148,2648	1/1:1,0:31:54.10:955,54,0	0/0:21,0:21:63.21:0,63,1240	0/0:45,0:45:99:0,134,2660	0/0:47,0:47:99:0,141,2601	0/0:53,0:53:99:0,156,3067	1/1:2,0:57:99:2187,108,0	1/1:0,0:24:47.48:826,47,0	0/0:52,0:52:99:0,147,2987	0/0:42,0:42:99:0,123,2484	0/0:43,0:43:99:0,123,2339	1/1:1,0:58:99:2012,110,0	1/1:5,0:73:50.91:2563,51,0	1/1:7,0:46:26.01:1567,26,0	1/1:3,0:19:33.11:632,33,0	0/0:29,0:28:84.25:0,84,1612	0/0:32,0:32:96.28:0,96,1868	0/0:106,0:106:99:0,301,5960	0/0:39,0:39:99:0,111,2120	0/0:23,0:23:66.23:0,66,1350	0/0:78,0:78:99:0,226,4538	0/0:36,0:36:99:0,108,2199	1/1:1,1:48:68.77:2129,69,0	1/1:3,0:33:63.33:1575,63,0	1/1:0,0:12:27.09:521,27,0
chr10	16828964	.	G	GGT	3086.96	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.894;DP=1304;FS=2.003;HRun=0;HaplotypeScore=221.6498;InbreedingCoeff=0.9999;MQ=61.29;MQ0=3;MQRankSum=-1.408;QD=32.16;ReadPosRankSum=-1.312;VQSLOD=3.6662;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:67,0:68:99:0,146,1968	0/0:16,0:16:42.13:0,42,530	0/0:63,0:42:84.46:0,84,996	0/0:61,0:49:99:0,104,1205	0/0:31,0:31:78.23:0,78,970	0/0:23,0:23:46.16:0,46,602	0/0:47,0:48:99:0,99,1203	0/0:54,0:54:99:0,114,1439	0/0:47,0:47:86.14:0,86,1463	0/0:56,0:57:99:0,150,1852	0/0:30,0:30:69.22:0,69,870	0/0:64,0:64:99:0,156,1954	0/0:35,0:35:86.96:0,87,1185	0/0:55,0:55:99:0,144,1804	0/0:71,0:71:99:0,184,2308	1/1:15,54:70:99:2445,122,0	0/0:47,0:47:99:0,123,1552	1/1:12,14:26:51.09:764,51,0	0/0:35,0:35:84.16:0,84,997	0/0:30,0:30:63.19:0,63,782	0/0:133,0:133:99:0,272,3537	0/0:33,0:33:84.25:0,84,1046	0/0:26,0:26:60.15:0,60,737	0/0:58,0:57:99:0,126,1571	0/0:25,0:25:45.13:0,45,556	0/0:46,0:47:99:0,123,1511	0/0:35,0:33:93.28:0,93,1159	0/0:15,0:16:41.97:0,42,506
chr10	16829010	.	TGTGA	T	886.03	PASS	AB=0.938;AC=4;AF=0.071;AN=56;BaseQRankSum=7.327;DP=1203;FS=1.084;HRun=0;HaplotypeScore=246.0060;InbreedingCoeff=0.5494;MQ=57.33;MQ0=20;MQRankSum=-2.622;QD=6.03;ReadPosRankSum=-4.533;VQSLOD=1.8570;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:65,0:65:99:0,145,3549	0/0:16,0:16:48.09:0,48,1022	0/0:64,0:22:26.26:0,26,439	0/1:60,0:21:44.48:44,0,226	0/0:29,0:29:80.92:0,81,1779	0/0:27,0:27:69.13:0,69,1431	0/0:44,0:44:99:0,120,2543	0/0:52,0:52:70.07:0,70,1052	0/0:39,0:39:99:0,108,2338	0/0:56,0:56:99:0,139,3585	0/0:27,0:27:81.08:0,81,1673	0/0:57,0:57:99:0,156,3466	0/0:37,0:37:99:0,106,2111	0/0:45,0:45:99:0,132,2902	0/0:50,0:50:99:0,111,2416	1/1:50,16:66:32.04:664,32,0	0/0:51,0:51:99:0,147,3019	0/1:18,3:21:4.49:293,0,4	0/0:24,0:24:50.25:0,50,450	0/0:25,0:25:38.72:0,39,278	0/0:111,0:111:99:0,210,1565	0/0:34,0:34:99:0,99,2186	0/0:25,0:25:71.96:0,72,1557	0/0:63,0:62:99:0,168,3614	0/0:18,0:18:12.31:0,12,241	0/0:44,0:44:99:0,129,2965	0/0:34,0:33:78.18:0,78,1971	0/0:19,0:19:51.09:0,51,1124
chr10	16829012	.	TGA	T	3121.43	PASS	AB=0.993;AC=10;AF=0.179;AN=56;BaseQRankSum=18.101;DP=1196;FS=3.129;HRun=0;HaplotypeScore=192.3564;InbreedingCoeff=0.2779;MQ=57.50;MQ0=19;MQRankSum=-1.021;QD=8.41;ReadPosRankSum=2.792;VQSLOD=3.6326;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:65,0:65:99:0,137,2557	0/0:16,0:16:36.82:0,37,687	0/0:63,0:22:27.89:0,28,381	0/1:56,0:19:45:45,0,191	0/0:28,0:28:43.20:0,43,1165	0/0:27,0:27:56.92:0,57,994	0/0:45,0:45:99:0,123,1839	0/1:53,0:53:99:108,0,492	0/0:37,1:38:80.84:0,81,1609	0/0:57,0:57:89.60:0,90,2492	0/0:27,0:27:55.53:0,56,1154	0/0:56,0:56:99:0,150,2513	0/0:36,0:36:99:0,102,1515	0/0:45,0:45:99:0,115,2041	0/0:51,0:51:99:0,105,1804	1/1:36,31:67:99:1818,162,0	0/0:51,0:51:99:0,122,2130	1/1:13,8:21:59.80:662,60,0	0/1:21,1:22:90.81:91,0,135	0/1:25,0:25:13.03:93,0,13	0/1:108,0:108:99:407,0,278	0/0:35,0:35:69.19:0,69,1484	0/0:26,0:26:75.13:0,75,1149	0/0:63,0:62:99:0,102,2449	0/1:18,0:18:54.48:54,0,73	0/0:44,0:44:99:0,113,2094	0/0:34,0:33:57.89:0,58,1359	0/0:18,0:18:38.92:0,39,791
chr10	16829014	.	AGT	A	4857.71	PASS	AB=0.870;AC=15;AF=0.268;AN=56;BaseQRankSum=14.446;DP=1182;FS=0.000;HRun=0;HaplotypeScore=181.8460;InbreedingCoeff=0.8515;MQ=57.64;MQ0=18;MQRankSum=0.589;QD=12.99;ReadPosRankSum=2.495;VQSLOD=4.7202;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:62,1:64:83.54:0,84,2044	0/0:15,1:16:5.17:0,5,517	0/0:62,0:21:17.66:0,18,253	0/0:55,0:20:10.66:0,11,56	0/0:27,1:29:7.91:0,8,1038	0/0:25,1:26:23.28:0,23,874	0/0:45,0:45:99:0,102,1546	1/1:23,29:53:89.63:997,90,0	0/0:38,1:39:55.93:0,56,1283	0/0:53,1:54:99:0,100,2236	0/0:25,1:26:26.01:0,26,838	0/0:54,0:54:99:0,141,2112	0/0:34,0:34:86.64:0,87,1318	0/0:44,2:46:74.20:0,74,1520	0/0:48,0:48:68.40:0,68,1502	1/1:66,0:66:87.55:623,88,0	0/0:50,2:52:46.46:0,46,1586	1/1:23,0:23:9.41:199,9,0	1/1:8,15:23:42.05:461,42,0	1/1:2,23:25:36.05:426,36,0	1/1:25,81:106:99:1808,147,0	0/0:35,0:35:48.21:0,48,1200	0/0:26,0:26:63.15:0,63,939	0/1:51,8:59:34.06:34,0,1939	1/1:4,13:18:26.92:309,27,0	0/0:44,1:45:77.44:0,77,1620	0/0:32,2:33:19.41:0,19,1192	0/0:16,1:17:11.21:0,11,632
chr10	16829445	.	ATGTGCAGGTGACATGAGAACGCCACGCCCTC	A	6137.42	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=9.421;DP=740;FS=18.219;HRun=0;HaplotypeScore=522.0986;InbreedingCoeff=0.8610;MQ=81.38;MQ0=0;MQRankSum=-7.131;QD=29.79;ReadPosRankSum=-0.270;VQSLOD=1.0624;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:57.17:0,57,6249	1/1:3,5:8:6.02:435,6,0	0/0:34,0:33:24.01:0,24,1099	0/0:25,0:25:21.07:0,21,974	1/1:6,6:12:3.01:223,3,0	0/0:18,0:18:33.08:0,33,3385	0/0:37,0:37:72.15:0,72,5389	0/0:21,0:21:18.04:0,18,826	0/0:37,0:37:45.15:0,45,4094	1/1:13,9:22:11.94:512,12,0	1/1:2,3:5:3.01:153,3,0	0/0:32,0:32:63.22:0,63,6862	0/0:40,0:40:87.28:0,87,8570	0/0:34,0:34:84.29:0,84,9228	1/1:15,13:28:15.05:918,15,0	1/1:16,17:33:9.03:634,9,0	1/1:18,19:37:15.05:1029,15,0	1/1:8,0:8:5.96:44,6,0	0/0:22,0:22:12.04:0,12,1619	0/0:20,0:20:33.11:0,33,3729	0/0:83,0:83:99:0,166,16257	0/0:25,0:25:33.11:0,33,3582	0/0:18,0:18:36.11:0,36,3290	0/0:30,0:30:60.18:0,60,5066	0/0:18,0:18:39.13:0,39,4309	1/1:10,16:26:32.98:1272,33,0	1/1:4,9:13:5.68:444,6,0	1/1:9,5:14:6.02:473,6,0
chr10	16830188	.	C	CG	107.43	PASS	AB=0.829;AC=20;AF=0.385;AN=52;BaseQRankSum=2.256;DP=244;FS=1.254;HRun=0;HaplotypeScore=54.5184;InbreedingCoeff=0.0544;MQ=90.00;MQ0=0;MQRankSum=-1.082;QD=0.93;ReadPosRankSum=-0.461;VQSLOD=1.2900;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:10,1:11:15.09:15,0,18	1/1:2,1:3:1.25:3,1,0	0/0:15,0:15:39.26:0,39,446	0/1:6,0:6:7.35:7,0,27	./.	0/1:7,0:7:12.12:15,0,12	0/1:11,0:12:9.38:9,0,11	0/0:13,0:13:33.09:0,33,415	0/0:2,1:3:5.20:0,5,29	0/0:3,0:3:2.94:0,3,21	./.	1/1:7,1:8:5.82:33,6,0	0/1:5,0:5:7.42:7,0,44	0/1:2,6:8:5.76:19,0,6	0/1:6,2:8:9.55:10,0,36	0/0:5,0:16:19.46:0,19,54	0/1:4,9:13:18.23:18,0,34	0/0:0,0:12:20.35:0,20,59	0/0:12,0:12:33.98:0,34,422	0/0:4,0:4:9.03:0,9,119	0/0:29,0:29:72.14:0,72,904	0/1:4,0:5:3.67:4,0,33	1/1:1,1:2:3:25,3,0	0/1:3,8:11:33.19:36,0,33	0/0:12,0:12:30.10:0,30,414	0/0:5,0:5:4.83:0,5,17	1/1:13,0:13:2.95:19,3,0	1/1:0,3:3:3.01:36,3,0
chr10	16830841	.	GC	G	7467.40	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-4.373;DP=645;FS=20.105;HRun=7;HaplotypeScore=80.5091;InbreedingCoeff=0.9984;MQ=83.30;MQ0=0;MQRankSum=-1.581;QD=24.64;ReadPosRankSum=2.705;VQSLOD=3.4456;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,50:57:99:1439,141,0	0/0:10,0:10:24.08:0,24,302	0/0:16,0:16:31.67:0,32,413	0/0:22,0:23:54.09:0,54,622	0/0:16,0:16:45.13:0,45,552	1/1:0,21:21:60.14:612,60,0	1/1:0,31:31:78.18:796,78,0	0/0:30,0:30:78.22:0,78,936	1/1:3,13:16:33.07:337,33,0	0/0:24,0:24:72.21:0,72,882	0/0:8,0:8:18.06:0,18,225	1/1:3,33:36:99:1010,99,0	1/1:4,18:22:54.11:550,54,0	1/1:5,23:28:60.13:612,60,0	0/0:22,0:22:63.19:0,63,777	1/1:5,15:20:33.07:337,33,0	0/0:36,0:36:93.28:0,93,1150	1/1:0,18:18:48.11:490,48,0	0/0:23,0:23:63.19:0,63,768	0/0:19,0:19:45.12:0,45,549	0/0:34,0:34:90.29:0,90,1132	1/1:3,17:20:51.11:520,51,0	1/1:1,15:16:42.09:428,42,0	1/1:7,11:18:33.07:337,33,0	0/0:22,0:22:54.11:0,54,674	0/0:17,0:17:51.16:0,51,642	0/0:32,0:30:90.29:0,90,1128	0/0:10,0:10:30.10:0,30,377
chr10	16832980	.	G	GA	7668.98	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=-4.102;DP=710;FS=0.000;HRun=7;HaplotypeScore=82.8781;InbreedingCoeff=0.9386;MQ=77.32;MQ0=0;MQRankSum=-2.000;QD=29.27;ReadPosRankSum=2.604;VQSLOD=5.1272;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:75.09:0,75,716	1/1:1,6:8:20.93:232,21,0	0/0:25,0:24:53.92:0,54,490	0/1:14,0:13:4.94:5,0,229	1/1:4,31:35:93.20:1087,93,0	0/0:23,0:22:66.09:0,66,631	0/0:18,0:18:48.06:0,48,458	0/0:31,0:31:78:0,78,740	0/0:21,0:21:54.07:0,54,516	1/1:2,28:30:81.25:979,81,0	1/1:2,21:23:60.18:721,60,0	0/0:22,0:22:60.07:0,60,573	0/0:21,0:21:51.06:0,51,487	0/0:18,0:18:44.57:0,45,434	1/1:8,31:39:87.22:1035,87,0	0/0:29,0:29:75.12:0,75,724	1/1:1,26:27:78.22:929,78,0	0/0:16,0:16:42.95:0,43,407	0/0:31,0:31:84.12:0,84,806	0/0:32,0:32:96.15:0,96,927	0/0:21,0:21:54.07:0,54,515	0/0:26,0:26:72.10:0,72,689	0/0:22,0:22:66.09:0,66,631	0/0:24,0:24:63.05:0,63,598	0/0:40,0:40:99:0,108,1038	1/1:5,32:37:96.29:1159,96,0	1/1:3,32:35:90.28:1087,90,0	1/1:0,14:14:36.11:435,36,0
chr10	16833645	.	T	TG	1391.36	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-7.482;DP=688;FS=11.085;HRun=6;HaplotypeScore=66.7644;InbreedingCoeff=0.9428;MQ=81.30;MQ0=0;MQRankSum=-4.479;QD=28.40;ReadPosRankSum=1.144;VQSLOD=3.8090;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,42:49:99:1486,120,0	0/0:8,0:8:24.05:0,24,245	0/0:18,0:18:30.10:0,30,381	0/0:20,0:20:54.05:0,54,523	0/0:23,0:23:60.09:0,60,593	0/0:18,0:18:51.11:0,51,520	0/0:25,0:25:66.11:0,66,658	0/0:22,0:22:54.09:0,54,543	0/0:33,0:33:96.19:0,96,966	0/0:34,0:34:90.15:0,90,895	0/0:23,0:23:66.14:0,66,668	0/0:34,0:34:93.21:0,93,949	0/0:18,0:18:51.11:0,51,520	0/0:28,0:28:81.14:0,81,811	0/0:30,0:30:84.19:0,84,857	0/0:34,0:34:99:0,99,1003	0/0:31,0:31:84.16:0,84,848	0/0:21,0:21:57.08:0,57,565	0/0:20,0:20:60.14:0,60,612	0/0:15,0:15:39.09:0,39,398	0/0:40,0:40:99:0,99,1010	0/0:35,0:35:88.18:0,88,941	0/0:15,0:15:45.10:0,45,454	0/0:19,0:19:51.10:0,51,515	0/0:15,0:15:39.08:0,39,393	0/0:28,0:28:69.15:0,69,704	0/0:29,0:29:75.15:0,75,758	0/0:3,0:3:9.02:0,9,92
chr10	16834128	.	G	GCAAAAGAAACCAAGACATTC	59009.18	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-1.051;DP=698;FS=2.408;HRun=0;HaplotypeScore=340.0502;InbreedingCoeff=0.9993;MQ=77.12;MQ0=0;MQRankSum=-20.290;QD=202.09;ReadPosRankSum=3.378;VQSLOD=4.1804;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:93.32:0,93,4822	1/1:11,5:17:45.15:3231,45,0	0/0:29,0:29:74.71:0,75,3204	0/0:16,0:16:42.14:0,42,1718	1/1:14,8:22:51.17:4082,51,0	0/0:17,0:17:51.16:0,51,2480	0/0:24,0:24:72.25:0,72,3753	0/0:29,0:28:87.30:0,87,3666	0/0:15,0:15:42.14:0,42,2112	1/1:25,9:38:99:7876,111,0	1/1:7,4:12:30.10:2377,30,0	0/0:33,0:33:99:0,99,5048	0/0:26,0:26:78.27:0,78,3970	0/0:32,0:32:87.28:0,87,4505	1/1:29,18:48:99:10216,129,0	1/1:16,16:35:93.32:7256,93,0	1/1:15,5:24:51.18:3719,51,0	1/1:8,9:20:45.15:3955,45,0	0/0:17,0:17:48.16:0,48,2020	0/0:16,0:16:48.16:0,48,2404	0/0:32,0:32:96.33:0,96,5118	0/0:16,0:16:48.16:0,48,2444	0/0:16,0:16:42.13:0,42,1957	0/0:29,0:29:87.30:0,87,4121	0/0:27,0:27:78.27:0,78,3748	1/1:20,9:33:96.32:7142,96,0	1/1:25,8:36:96.31:7503,96,0	1/1:4,3:7:21.07:1652,21,0
chr10	16836421	.	G	GA	3946.91	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=16.979;DP=587;FS=2.020;HRun=1;HaplotypeScore=92.2950;InbreedingCoeff=0.9586;MQ=74.56;MQ0=2;MQRankSum=-2.188;QD=18.02;ReadPosRankSum=3.242;VQSLOD=4.2177;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,141,1829	1/1:8,0:8:13.94:91,14,0	0/0:6,0:6:12.04:0,12,155	0/0:17,0:17:2.78:0,3,448	1/1:21,0:20:41.70:262,42,0	0/0:31,0:31:93.29:0,93,1190	0/0:20,0:20:60.19:0,60,778	0/0:36,0:36:99:0,105,1348	0/0:20,0:20:60.20:0,60,779	1/1:23,0:22:53.65:356,54,0	1/1:10,0:10:17.72:112,18,0	0/0:20,0:20:51.15:0,51,647	0/0:14,0:14:42.14:0,42,545	0/0:19,0:19:57.15:0,57,697	1/1:27,0:27:63.86:412,64,0	1/1:9,13:22:49.50:595,49,0	1/1:27,1:28:66.37:426,66,0	1/1:2,29:31:84.74:1067,85,0	0/0:25,0:25:75.23:0,75,960	0/0:27,0:27:75.22:0,75,958	0/0:13,0:13:39.11:0,39,488	0/0:15,0:15:42.14:0,42,545	0/0:13,0:13:36.12:0,36,466	0/0:20,0:20:57.19:0,57,740	0/0:23,0:23:66.19:0,66,840	1/1:23,0:23:49.89:344,50,0	1/1:19,0:19:36.33:226,36,0	1/1:7,0:7:9.80:56,10,0
chr10	16836427	.	A	AAAT	8670.38	PASS	AB=1.000;AC=20;AF=0.357;AN=56;BaseQRankSum=14.021;DP=570;FS=1.193;HRun=0;HaplotypeScore=94.1966;InbreedingCoeff=0.8337;MQ=69.98;MQ0=2;MQRankSum=-2.881;QD=40.33;ReadPosRankSum=1.251;VQSLOD=5.7245;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,135,2146	1/1:0,7:7:14.74:348,15,0	0/0:3,0:3:9.01:0,9,106	0/0:13,0:13:31.04:0,31,454	1/1:1,21:24:54.11:1095,54,0	0/0:28,0:28:84.26:0,84,1355	0/0:23,0:23:63.19:0,63,995	0/0:38,0:38:99:0,108,1617	0/0:19,0:19:57.19:0,57,929	1/1:2,22:23:63.22:1354,63,0	1/1:1,9:11:23.83:449,24,0	0/0:15,0:15:45.14:0,45,718	0/0:16,0:16:48.14:0,48,743	0/0:18,0:18:54.16:0,54,841	1/1:1,24:27:63.21:1431,63,0	0/1:17,0:17:20.11:66,0,20	1/1:1,27:28:66.23:1515,66,0	0/1:33,0:33:15.20:77,0,15	0/0:24,0:24:69.21:0,69,1083	0/0:31,0:31:87.26:0,87,1338	0/0:11,0:11:33.11:0,33,540	0/0:16,0:16:48.16:0,48,788	0/0:11,0:11:30.10:0,30,487	0/0:19,0:19:57.19:0,57,910	0/0:24,0:24:72.23:0,72,1152	1/1:1,20:21:57.19:1213,57,0	1/1:1,14:15:36.12:836,36,0	1/1:0,7:7:15.05:288,15,0
chr10	16836931	.	GGCCCAA	G	10020.78	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=15.405;DP=611;FS=2.526;HRun=0;HaplotypeScore=136.1571;InbreedingCoeff=0.9983;MQ=74.48;MQ0=0;MQRankSum=-15.581;QD=62.63;ReadPosRankSum=1.891;VQSLOD=5.4495;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,108,3824	1/1:0,10:10:23.95:590,24,0	0/0:19,0:19:57.19:0,57,1832	0/0:13,0:13:39.12:0,39,1078	1/1:0,11:11:33.11:812,33,0	0/0:11,0:11:30.10:0,30,1045	0/0:34,0:34:99:0,102,3354	0/0:24,0:24:69.24:0,69,2423	0/0:22,0:22:66.23:0,66,2302	1/1:1,25:26:75.26:1793,75,0	1/1:0,15:15:42.14:1031,42,0	0/0:29,0:29:87.30:0,87,3090	0/0:22,0:22:63.22:0,63,2255	0/0:22,0:22:66.23:0,66,2342	1/1:1,27:28:66.23:1606,66,0	0/0:21,0:21:60.21:0,60,2079	1/1:3,22:25:51.18:1210,51,0	0/0:25,0:25:72.21:0,72,2466	0/0:23,0:23:63.22:0,63,2201	0/0:13,0:13:39.13:0,39,1331	0/0:41,0:41:99:0,120,4097	0/0:16,0:16:48.16:0,48,1645	0/0:14,0:14:42.14:0,42,1455	0/0:35,0:35:99:0,102,3474	0/0:31,0:31:90.31:0,90,3095	1/1:1,18:19:54.16:1208,54,0	1/1:0,20:20:54.19:1327,54,0	1/1:0,6:6:18.06:443,18,0
chr10	16837153	.	CAAG	C	2230.44	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.234;DP=749;FS=1.182;HRun=0;HaplotypeScore=114.6154;InbreedingCoeff=0.9687;MQ=87.36;MQ0=1;MQRankSum=-2.827;QD=40.55;ReadPosRankSum=3.768;VQSLOD=5.0184;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,154,3497	0/0:14,0:14:42.14:0,42,944	0/0:28,0:29:84.26:0,84,1759	0/0:23,0:23:66.11:0,66,1344	0/0:12,0:12:33.09:0,33,714	0/0:22,0:22:66.21:0,66,1453	0/0:36,0:36:99:0,99,2165	0/0:36,0:36:99:0,105,2214	0/0:28,0:28:84.29:0,84,1919	0/0:29,0:29:84.29:0,84,1891	0/0:8,0:8:21.05:0,21,439	0/0:40,0:40:99:0,120,2607	0/0:32,0:32:96.33:0,96,2123	0/0:32,0:32:96.32:0,96,2147	0/0:30,0:30:87.30:0,87,2001	1/1:0,25:25:69.24:1176,69,0	0/0:35,0:35:99:0,102,2337	1/1:0,30:30:69.24:1176,69,0	0/0:17,0:17:51.14:0,51,1048	0/0:23,0:23:69.24:0,69,1569	0/0:38,0:38:99:0,111,2492	0/0:22,0:22:63.20:0,63,1403	0/0:13,0:13:39.13:0,39,878	0/0:42,0:41:99:0,114,2587	0/0:27,0:27:81.26:0,81,1779	0/0:32,0:32:93.31:0,93,2099	0/0:20,0:20:57.20:0,57,1301	0/0:3,0:3:9.03:0,9,207
chr10	16837918	.	TTTTGGG	T	6695.66	PASS	AB=1.000;AC=26;AF=0.464;AN=56;BaseQRankSum=0.188;DP=582;FS=18.496;HRun=0;HaplotypeScore=155.0581;InbreedingCoeff=0.4289;MQ=59.13;MQ0=7;MQRankSum=-8.128;QD=18.60;ReadPosRankSum=5.613;VQSLOD=3.0653;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:34,0:34:24.14:24,0,608	1/1:0,6:6:9.01:190,9,0	0/0:52,0:17:36.49:0,36,456	0/0:24,0:12:16.68:0,17,278	1/1:2,21:23:42.02:739,42,0	0/0:20,0:19:27.01:0,27,562	0/1:30,0:30:47.28:47,0,607	0/0:15,0:15:42.06:0,42,641	0/1:19,0:19:14.48:14,0,452	1/1:2,19:21:51.04:806,51,0	1/1:1,11:12:27.03:475,27,0	0/1:26,0:26:48.28:48,0,814	0/1:17,0:17:18.82:19,0,390	0/1:19,0:19:37.39:37,0,437	1/1:0,29:29:63.15:1304,63,0	0/0:21,0:21:42.09:0,42,679	1/1:0,19:19:23.81:539,24,0	0/0:18,0:18:42.05:0,42,727	0/0:11,0:11:27.48:0,27,344	0/0:9,0:9:27.09:0,27,453	0/0:16,0:15:42.05:0,42,551	0/0:22,0:22:32.99:0,33,693	0/1:17,0:17:4.20:4,0,392	0/1:31,0:30:36.18:36,0,483	0/0:13,0:12:32.23:0,32,554	1/1:1,27:28:63.13:1127,63,0	1/1:1,22:23:51.17:1093,51,0	1/1:0,6:6:9.03:192,9,0
chr10	16837921	.	TG	T	1857.47	PASS	AB=0.980;AC=45;AF=0.804;AN=56;BaseQRankSum=1.407;DP=546;FS=2.920;HRun=12;HaplotypeScore=126.1234;InbreedingCoeff=0.3546;MQ=59.52;MQ0=7;MQRankSum=-2.249;QD=4.09;ReadPosRankSum=3.094;VQSLOD=1.6561;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:23,6:32:45.09:233,45,0	1/1:6,0:6:6.66:20,7,0	0/0:51,1:16:3.82:0,4,95	0/0:25,0:12:11.34:0,11,80	1/1:23,0:23:28.01:85,28,0	1/1:14,4:19:17.79:99,18,0	1/1:16,7:29:48.65:254,49,0	0/0:15,0:15:9.04:0,9,56	1/1:14,3:19:17.71:113,18,0	1/1:21,0:21:17.24:51,17,0	1/1:11,0:12:17.76:54,18,0	1/1:20,0:23:8.09:25,8,0	1/1:14,0:18:21.45:87,21,0	1/1:13,2:17:17.39:68,17,0	1/1:29,0:29:42.16:128,42,0	1/1:10,0:10:8.94:65,9,0	1/1:19,0:19:17.36:53,17,0	0/1:15,0:15:4.02:58,0,4	0/1:8,0:9:14.65:15,0,21	0/1:7,0:7:12.91:13,0,17	0/1:13,0:12:10.33:10,0,46	1/1:15,4:19:12.91:112,13,0	1/1:11,4:16:15.74:80,16,0	1/1:22,4:28:23.93:135,24,0	0/1:11,0:10:25.08:25,0,41	1/1:27,0:28:33.47:102,33,0	1/1:23,0:23:36.67:110,37,0	1/1:6,0:6:6.48:20,6,0
chr10	16839057	.	TTGTGTGTGTG	T	6225.42	PASS	AB=0.646;AC=34;AF=0.654;AN=52;BaseQRankSum=7.282;DP=593;FS=6.653;HRun=0;HaplotypeScore=229.9178;InbreedingCoeff=0.7217;MQ=63.22;MQ0=9;MQRankSum=-4.519;QD=17.74;ReadPosRankSum=5.309;VQSLOD=2.9532;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:26,10:36:5.20:168,5,0	1/1:3,0:9:6:124,6,0	0/0:29,0:16:12.04:0,12,368	0/0:34,0:25:21.54:0,22,619	0/1:8,0:15:0:0,0,0	1/1:3,8:11:6.02:182,6,0	1/1:13,11:24:24.08:658,24,0	0/0:37,0:34:42.61:0,43,1309	1/1:5,14:19:21:545,21,0	1/1:9,0:21:21.07:445,21,0	1/1:8,0:9:3.01:37,3,0	1/1:7,9:16:9.03:232,9,0	1/1:7,10:17:24.08:652,24,0	0/0:7,8:14:0:0,0,0	./.	1/1:9,21:30:12.04:329,12,0	0/1:8,0:22:7.47:203,0,7	1/1:6,12:20:24.08:601,24,0	0/0:14,0:16:29.45:0,29,718	0/0:18,0:23:36.12:0,36,1366	0/0:25,0:31:66.21:0,66,2238	1/1:8,8:16:3.01:83,3,0	./.	1/1:19,7:26:9.03:179,9,0	0/0:16,0:20:40.02:0,40,1216	1/1:11,0:33:53.97:1160,54,0	1/1:3,0:18:18.06:418,18,0	1/1:3,0:8:9.03:209,9,0
chr10	16839080	.	T	TACAC	1007.46	PASS	AB=0.979;AC=12;AF=0.214;AN=56;BaseQRankSum=-0.035;DP=675;FS=17.802;HRun=0;HaplotypeScore=227.6216;InbreedingCoeff=-0.0643;MQ=38.74;MQ0=19;MQRankSum=1.240;QD=4.20;ReadPosRankSum=-1.799;VQSLOD=0.8472;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:34,3:35:99:148,0,351	0/0:9,0:9:5.78:0,6,76	0/0:52,0:11:27.98:0,28,562	0/0:68,0:19:54.07:0,54,1031	0/0:14,0:14:3.01:0,3,63	0/0:13,0:13:21.03:0,21,310	0/1:30,1:31:99:369,0,571	0/0:37,0:33:93.74:0,94,1706	0/1:21,0:21:39.03:39,0,238	0/0:26,0:25:32.56:0,33,785	1/1:8,0:8:2.56:37,3,0	0/1:14,0:14:35.54:36,0,144	0/1:18,0:18:99:235,0,304	0/0:15,0:14:12.04:0,12,233	0/1:19,0:19:0:0,0,0	0/1:29,0:28:59.12:59,0,129	0/0:20,0:20:8.95:0,9,164	0/1:23,0:23:0.81:1,0,471	0/0:15,0:14:39.21:0,39,622	0/0:26,0:26:42.14:0,42,730	0/0:43,0:39:90.29:0,90,1682	0/1:13,1:14:68.49:68,0,219	0/0:19,0:19:24.08:0,24,499	0/1:25,1:26:99:155,0,246	0/0:18,0:18:42.14:0,42,733	0/0:34,0:34:36.77:0,37,1051	0/0:17,0:17:18.04:0,18,183	0/0:9,0:9:18.04:0,18,289
chr10	16839113	.	GTGTA	G	1510.85	PASS	AB=0.930;AC=13;AF=0.232;AN=56;BaseQRankSum=10.476;DP=756;FS=8.135;HRun=0;HaplotypeScore=244.9910;InbreedingCoeff=0.4624;MQ=40.89;MQ0=30;MQRankSum=-10.082;QD=9.44;ReadPosRankSum=2.488;VQSLOD=1.4650;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:38:42.10:0,42,975	1/1:5,2:7:3.96:68,4,0	0/0:80,0:19:47.98:0,48,778	0/0:90,0:17:44.21:0,44,697	1/1:16,1:17:3.46:24,3,0	0/0:11,0:11:17.90:0,18,483	0/0:34,0:34:63.82:0,64,1512	0/0:33,0:33:67.23:0,67,1826	0/0:23,0:22:35.18:0,35,893	0/1:20,5:24:4.92:510,0,5	0/1:10,1:11:0.10:0,0,0	0/0:21,0:21:33.11:0,33,882	0/0:20,0:20:30.05:0,30,996	0/0:19,0:19:39.13:0,39,974	0/0:19,1:20:1.72:0,2,7	0/0:23,0:22:7.15:0,7,87	1/1:16,0:15:0.90:81,1,0	0/1:25,0:25:58.11:58,0,212	0/0:18,0:13:39.07:0,39,648	0/0:20,0:20:37.63:0,38,793	0/0:45,0:45:76.02:0,76,2294	0/0:23,0:23:36.12:0,36,962	0/0:25,0:25:33.11:0,33,888	0/0:37,0:37:54.19:0,54,1391	0/0:15,0:15:29.10:0,29,582	1/1:31,7:38:13.22:727,13,0	0/1:12,0:12:49.35:67,0,49	0/1:8,1:9:3.76:124,0,4
chr10	16839126	.	T	TGCGC	3678.71	PASS	AB=0.813;AC=15;AF=0.268;AN=56;BaseQRankSum=11.786;DP=720;FS=6.199;HRun=0;HaplotypeScore=230.2812;InbreedingCoeff=0.6338;MQ=42.57;MQ0=27;MQRankSum=-11.175;QD=20.55;ReadPosRankSum=0.615;VQSLOD=2.2635;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:40:54.18:0,54,1001	1/1:8,1:8:6.89:68,7,0	0/0:62,0:15:39.13:0,39,721	0/0:71,0:12:33.11:0,33,600	0/0:14,1:15:0.47:0,0,1	0/0:15,0:15:29.97:0,30,562	0/0:34,0:34:71.57:0,72,1283	0/0:30,0:30:90.31:0,90,1700	0/0:21,0:20:36:0,36,675	1/1:22,8:27:71.99:1257,72,0	0/1:5,6:12:0.08:0,0,0	0/0:21,0:21:42.14:0,42,807	0/0:21,0:21:50.22:0,50,970	0/0:20,0:20:42.14:0,42,828	0/1:9,9:18:0.28:1,0,0	0/1:25,0:23:9.82:10,0,72	0/1:9,4:12:14.03:262,0,14	0/1:24,0:24:99:146,0,412	0/0:19,0:12:36.09:0,36,591	0/0:20,0:20:37.68:0,38,673	0/0:51,0:50:99:0,105,1997	0/0:26,0:26:42.14:0,42,801	0/0:23,0:23:42.14:0,42,828	0/0:36,0:36:60.21:0,60,1197	0/0:15,0:15:23.96:0,24,436	1/1:24,8:33:34.71:1383,35,0	1/1:6,1:8:21.01:263,21,0	1/1:6,1:7:12.56:289,13,0
chr10	16839131	.	GTGCA	G	990.44	PASS	AB=0.955;AC=11;AF=0.196;AN=56;BaseQRankSum=9.799;DP=704;FS=16.941;HRun=0;HaplotypeScore=228.5966;InbreedingCoeff=0.2160;MQ=43.59;MQ0=27;MQRankSum=-8.977;QD=6.04;ReadPosRankSum=1.892;VQSLOD=1.4246;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:43:52.55:0,53,1282	0/1:9,0:8:20.77:21,0,31	0/0:52,0:15:39.11:0,39,877	0/0:56,0:9:27.05:0,27,560	1/1:12,0:12:0.47:1,0,0	0/0:15,0:15:29.94:0,30,690	0/0:35,0:35:73.61:0,74,1651	0/0:28,0:28:81.25:0,81,1831	0/0:23,0:22:21.38:0,21,864	0/1:32,0:29:99:223,0,293	0/1:11,0:11:0.10:1,0,0	0/0:22,0:21:44.64:0,45,1053	0/0:21,0:21:52.06:0,52,1264	0/0:20,0:20:45.05:0,45,1170	0/0:18,0:18:1.40:0,1,6	0/1:14,12:25:2.13:52,0,2	0/1:14,0:13:7.14:7,0,133	1/1:16,9:25:9.34:517,9,0	0/0:17,0:9:27.08:0,27,577	0/0:20,0:20:35.79:0,36,782	0/0:54,0:52:99:0,113,2719	0/0:28,0:28:51.17:0,51,1226	0/0:23,0:23:45.05:0,45,1154	0/0:39,0:39:69.24:0,69,1696	0/0:15,0:15:25.89:0,26,557	0/1:29,0:29:99:253,0,307	0/0:9,0:9:1:0,1,152	0/1:6,0:6:38.79:48,0,39
chr10	16839133	.	GCA	G	789.76	PASS	AB=0.952;AC=11;AF=0.196;AN=56;BaseQRankSum=10.754;DP=687;FS=17.677;HRun=0;HaplotypeScore=207.5595;InbreedingCoeff=0.1766;MQ=44.24;MQ0=26;MQRankSum=-8.978;QD=4.85;ReadPosRankSum=1.267;VQSLOD=1.8235;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,2:42:51.97:0,52,1018	0/1:9,0:8:15.81:16,0,30	0/0:48,0:14:39.03:0,39,694	0/0:53,0:9:27.05:0,27,459	0/1:11,1:12:0:0,0,0	0/0:15,0:15:33.08:0,33,594	0/0:38,0:37:64.57:0,65,1333	0/0:27,0:27:81.21:0,81,1473	0/0:21,2:22:1.34:0,1,637	0/1:30,2:29:99:213,0,201	0/1:11,0:11:0.26:0,0,0	0/0:23,0:22:47.37:0,47,853	0/0:21,0:21:51.64:0,52,978	0/0:18,0:18:45.05:0,45,886	0/0:19,0:19:2.51:0,3,8	0/1:20,1:19:0.91:18,0,1	0/1:12,1:12:32.57:33,0,81	1/1:20,1:21:31.97:298,32,0	0/0:17,0:9:26.98:0,27,440	0/0:21,0:21:35.81:0,36,634	0/0:54,0:52:99:0,113,2055	0/0:28,0:28:51.17:0,51,948	0/0:24,0:24:45.05:0,45,856	0/0:38,0:38:72.25:0,72,1361	0/0:14,0:14:25.87:0,26,428	0/1:28,1:29:99:287,0,169	0/1:9,0:9:18.58:19,0,75	0/1:5,1:6:20.53:48,0,21
chr10	16839134	.	CAT	C	1161.14	PASS	AB=0.835;AC=10;AF=0.179;AN=56;BaseQRankSum=11.054;DP=679;FS=6.815;HRun=0;HaplotypeScore=201.3580;InbreedingCoeff=0.1320;MQ=44.55;MQ0=25;MQRankSum=-10.607;QD=7.21;ReadPosRankSum=0.522;VQSLOD=2.4129;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:40:60.01:0,60,1083	0/1:6,3:8:30.99:45,0,31	0/0:46,0:14:39.11:0,39,666	0/0:51,1:8:24.07:0,24,388	0/1:6,7:13:0.04:0,0,0	0/0:15,0:15:33.04:0,33,602	0/0:38,0:37:86.92:0,87,1488	0/0:28,0:28:84.26:0,84,1505	0/0:22,0:21:20.37:0,20,701	0/1:24,8:29:99:394,0,141	0/1:8,2:10:0.16:0,0,0	0/0:23,0:22:48.16:0,48,919	0/0:20,0:20:51.61:0,52,948	0/0:19,0:19:48.16:0,48,929	0/0:15,3:18:1.93:0,2,7	0/1:20,1:19:4.15:8,0,4	0/1:12,0:11:28.37:28,0,91	0/1:20,1:21:4.30:128,0,4	0/0:18,0:10:25.85:0,26,405	0/0:20,0:20:36.06:0,36,614	0/0:53,0:51:99:0,110,2120	0/0:27,0:27:51.17:0,51,1006	0/0:24,0:24:45.15:0,45,903	0/0:39,0:39:75.22:0,75,1412	0/0:15,0:15:28.87:0,29,484	0/1:18,10:28:99:531,0,108	0/1:9,0:9:53.64:54,0,66	0/1:3,3:6:0.24:104,0,0
chr10	16839142	.	TGC	T	1127.14	PASS	AB=0.833;AC=15;AF=0.268;AN=56;BaseQRankSum=9.799;DP=677;FS=12.429;HRun=0;HaplotypeScore=191.1246;InbreedingCoeff=0.2168;MQ=46.00;MQ0=22;MQRankSum=-6.268;QD=5.64;ReadPosRankSum=-3.312;VQSLOD=1.5947;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:41:69.16:0,69,1097	0/1:5,2:7:13.47:20,0,13	0/0:33,0:11:31.56:0,32,385	0/0:38,1:7:14.98:0,15,175	1/1:14,1:15:3.89:26,4,0	0/0:16,0:16:36.06:0,36,589	0/0:38,0:37:81.75:0,82,1435	0/0:31,0:30:70.39:0,70,1089	0/0:19,0:18:35.83:0,36,609	0/1:25,6:26:70.49:318,0,70	1/1:8,3:11:2.74:25,3,0	0/0:23,0:22:54.17:0,54,915	0/0:21,0:21:45.62:0,46,781	0/0:20,0:20:45.05:0,45,812	1/1:16,3:21:6.25:73,6,0	1/1:26,0:24:0.98:23,1,0	0/1:13,1:13:30.81:62,0,31	0/1:23,0:27:48.55:117,0,49	0/0:15,0:8:21.04:0,21,286	0/0:16,0:16:27.07:0,27,413	0/0:56,0:54:93.97:0,94,1792	0/0:29,0:29:54.17:0,54,914	0/0:23,0:23:45.05:0,45,779	0/0:36,0:36:78.21:0,78,1359	0/0:17,0:17:27.93:0,28,500	0/1:25,6:31:35.53:412,0,36	0/1:7,3:10:13.96:135,0,14	0/1:5,1:6:13.18:74,0,13
chr10	16840528	.	CCT	C	19283.19	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=11.530;DP=709;FS=2.909;HRun=0;HaplotypeScore=95.5526;InbreedingCoeff=0.9912;MQ=75.35;MQ0=4;MQRankSum=-3.932;QD=36.52;ReadPosRankSum=6.243;VQSLOD=7.0894;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,37:43:99:1462,102,0	1/1:1,6:7:15.05:214,15,0	0/0:23,0:23:54.16:0,54,886	0/0:18,0:18:54.16:0,54,922	1/1:3,11:14:36.12:515,36,0	1/1:4,15:19:51.17:730,51,0	1/1:5,27:32:87.26:1207,87,0	0/0:27,0:27:66.23:0,66,1196	1/1:2,26:28:72.24:1032,72,0	1/1:0,21:21:63.18:867,63,0	1/1:0,12:12:30.10:430,30,0	1/1:2,25:27:66.22:945,66,0	1/1:4,22:25:69.12:989,69,0	1/1:3,26:27:69.23:988,69,0	1/1:4,35:38:99:1587,111,0	1/1:5,35:40:99:1547,108,0	1/1:4,35:39:87.26:1246,87,0	1/1:3,25:28:75.25:1074,75,0	0/0:20,0:20:54.18:0,54,954	0/0:15,0:15:45.15:0,45,825	0/0:64,0:64:99:0,184,3321	1/1:0,19:19:48.16:688,48,0	1/1:1,10:11:27.09:387,27,0	1/1:9,34:43:99:1401,99,0	0/0:14,0:14:42.14:0,42,751	1/1:0,18:18:54.18:774,54,0	1/1:4,25:29:72.24:1030,72,0	1/1:0,4:4:12.04:172,12,0
chr10	16840531	.	CT	C	2203.28	PASS	AB=1.000;AC=41;AF=0.732;AN=56;BaseQRankSum=16.726;DP=686;FS=0.676;HRun=1;HaplotypeScore=140.8583;InbreedingCoeff=0.8629;MQ=75.30;MQ0=4;MQRankSum=-3.808;QD=4.35;ReadPosRankSum=8.125;VQSLOD=0.0302;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:39,0:38:1.48:123,1,0	0/1:6,0:6:6.94:15,0,7	0/0:23,0:23:57.17:0,57,847	0/0:18,0:18:54.15:0,54,815	1/1:13,0:13:24:69,24,0	1/1:17,0:17:34.81:100,35,0	1/1:30,0:30:31.40:125,31,0	0/0:24,0:24:72.24:0,72,1119	1/1:27,0:27:48.89:140,49,0	1/1:21,0:21:33.41:123,33,0	1/1:12,0:12:20.55:59,21,0	1/1:26,1:27:10.67:92,11,0	1/1:24,1:24:47.19:135,47,0	1/1:27,0:25:47.31:137,47,0	1/1:38,1:38:53.49:190,53,0	1/1:39,0:39:73.85:211,74,0	1/1:37,1:38:59.01:169,59,0	1/1:27,2:29:53.79:157,54,0	0/0:19,0:19:53.55:0,54,822	0/0:15,0:15:45.15:0,45,719	0/0:66,0:66:99:0,192,3001	1/1:20,0:20:10.86:68,11,0	1/1:10,1:11:18.11:52,18,0	1/1:36,1:37:49.67:173,50,0	0/0:15,0:15:42.14:0,42,671	1/1:18,0:18:36.67:104,37,0	1/1:27,0:27:48.67:138,49,0	1/1:4,0:4:8.15:23,8,0
chr10	16841955	.	ACCCC	A	12870.44	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=6.864;DP=568;FS=19.743;HRun=12;HaplotypeScore=150.6823;InbreedingCoeff=0.9943;MQ=70.57;MQ0=0;MQRankSum=-7.445;QD=29.32;ReadPosRankSum=8.501;VQSLOD=1.1369;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:13,20:33:51.05:746,51,0	1/1:3,14:18:33.09:487,33,0	0/0:26,0:25:32.54:0,33,780	0/0:22,0:20:30.10:0,30,595	1/1:5,22:27:42.06:635,42,0	1/1:7,9:16:24.51:364,25,0	1/1:6,18:24:36.54:546,37,0	0/0:14,0:20:27.95:0,28,408	1/1:1,18:19:51.16:771,51,0	1/1:6,19:25:57.17:861,57,0	1/1:1,11:12:20.84:317,21,0	1/1:7,22:29:63.17:952,63,0	1/1:3,17:20:54.63:796,55,0	1/1:1,21:22:60.20:896,60,0	1/1:3,17:20:46.09:682,46,0	1/1:3,0:24:50.49:369,50,0	1/1:7,12:19:21.51:318,22,0	1/1:1,0:15:32.62:227,33,0	0/0:13,0:14:26.99:0,27,375	0/0:8,0:11:26.90:0,27,346	0/0:26,0:29:55.56:0,56,674	1/1:3,17:20:45.61:681,46,0	1/1:6,9:15:27.07:408,27,0	1/1:8,16:24:42.11:635,42,0	0/0:7,0:7:17.97:0,18,269	1/1:4,18:22:54.15:817,54,0	1/1:2,25:28:72.23:1089,72,0	1/1:0,7:7:18.06:272,18,0
chr10	16844415	.	A	AACAGACAGACAG	22385.80	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-8.871;DP=764;FS=2.730;HRun=0;HaplotypeScore=242.5823;InbreedingCoeff=0.9949;MQ=67.12;MQ0=1;MQRankSum=-16.124;QD=74.37;ReadPosRankSum=-2.946;VQSLOD=4.2998;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:27,17:45:45.15:2550,45,0	0/0:10,0:10:21.07:0,21,734	0/0:24,0:20:21.99:0,22,547	0/0:33,0:26:19.74:0,20,1151	0/0:33,0:33:57.20:0,57,1896	1/1:18,13:36:42.14:2433,42,0	1/1:23,10:35:48.16:2621,48,0	0/0:26,0:26:45.15:0,45,1319	1/1:9,11:22:42.14:2460,42,0	0/0:21,0:21:54.19:0,54,1775	0/0:18,0:18:39.13:0,39,1198	1/1:16,11:29:39.13:2212,39,0	1/1:13,16:33:51.65:2934,52,0	1/1:14,6:21:30.10:1756,30,0	0/0:34,0:34:84.26:0,84,2726	0/0:35,0:35:84.28:0,84,2759	0/0:52,0:53:99:0,114,3783	0/0:31,0:31:72.25:0,72,2265	0/0:17,0:17:18.05:0,18,530	0/0:21,0:21:36.12:0,36,1109	0/0:36,0:36:81.26:0,81,2607	1/1:19,13:34:54.19:3001,54,0	1/1:12,10:24:24.08:1361,24,0	1/1:15,6:21:17.97:1057,18,0	0/0:16,0:16:36.12:0,36,1201	0/0:19,0:19:45.05:0,45,1481	0/0:26,0:26:54.19:0,54,1867	0/0:10,0:10:24.08:0,24,838
chr10	16846968	.	A	AACACACACACACAC	6128.43	PASS	AB=0.922;AC=26;AF=0.520;AN=50;BaseQRankSum=1.191;DP=593;FS=6.135;HRun=0;HaplotypeScore=225.0703;InbreedingCoeff=0.6442;MQ=62.85;MQ0=12;MQRankSum=-7.561;QD=23.48;ReadPosRankSum=-4.469;VQSLOD=2.6379;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:28:27:0,27,721	1/1:8,0:8:3.01:142,3,0	./.	./.	./.	0/0:23,0:23:24.08:0,24,830	0/1:27,0:28:11.27:11,0,866	1/1:28,0:27:27.96:898,28,0	0/0:21,0:21:24.08:0,24,749	1/1:24,0:25:30.68:1067,31,0	1/1:12,0:11:2.88:24,3,0	0/0:15,0:16:12.03:0,12,356	0/0:15,0:15:18.06:0,18,619	0/0:7,0:9:6.02:0,6,141	1/1:21,0:24:11.98:524,12,0	1/1:19,3:23:9.03:469,9,0	0/1:22,3:27:18.71:378,0,19	1/1:17,0:20:18.01:593,18,0	1/1:8,0:8:2.50:9,2,0	1/1:6,0:6:2.89:25,3,0	0/0:28,0:27:2.04:0,2,7	0/0:14,0:14:18.06:0,18,699	0/0:5,0:6:9.03:0,9,295	0/0:36,0:38:87.30:0,87,2802	0/0:10,0:16:15.04:0,15,351	1/1:23,0:22:38.92:1101,39,0	1/1:19,0:19:17.55:652,18,0	1/1:5,0:8:6.02:234,6,0
chr10	16847115	.	GC	G	2707.40	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=7.419;DP=490;FS=7.174;HRun=2;HaplotypeScore=60.7780;InbreedingCoeff=0.9746;MQ=87.09;MQ0=0;MQRankSum=-2.990;QD=26.03;ReadPosRankSum=2.799;VQSLOD=3.0441;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:78.21:0,78,1086	0/0:10,0:10:24.04:0,24,316	0/0:14,0:14:39.08:0,39,518	0/0:22,0:22:60.14:0,60,816	0/0:13,0:13:21.06:0,21,294	0/0:13,0:13:33.09:0,33,473	0/0:22,0:22:66.18:0,66,927	1/1:1,10:11:18.05:220,18,0	0/0:10,0:10:30.10:0,30,441	0/0:22,0:22:57.19:0,57,846	0/0:7,0:7:6.02:0,6,90	0/0:19,0:19:57.15:0,57,807	0/0:14,0:14:39.13:0,39,578	0/0:14,0:14:42.14:0,42,629	0/0:16,0:16:45.14:0,45,651	1/1:1,21:22:66.15:822,66,0	0/0:33,0:33:75.21:0,75,1097	1/1:0,18:18:54.18:701,54,0	1/1:4,8:12:20.87:269,21,0	1/1:4,18:22:30.10:389,30,0	1/1:6,13:19:39.12:493,39,0	0/0:10,0:10:24.08:0,24,358	0/0:19,0:19:48.62:0,49,699	0/0:19,0:18:57.19:0,57,854	0/0:17,0:17:39.12:0,39,561	0/0:20,0:19:35.78:0,36,516	0/0:20,0:20:57.17:0,57,808	0/0:20,0:20:54.14:0,54,730
chr10	16847167	.	GA	G	3745.34	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=8.302;DP=510;FS=12.796;HRun=2;HaplotypeScore=85.5502;InbreedingCoeff=0.9784;MQ=89.04;MQ0=1;MQRankSum=-1.308;QD=32.57;ReadPosRankSum=-2.488;VQSLOD=1.5874;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:90.25:0,90,1268	0/0:3,0:3:6.01:0,6,57	0/0:35,0:30:72.92:0,73,809	0/0:22,0:21:28.31:0,28,487	0/0:12,0:12:36.02:0,36,331	0/0:17,0:17:51.16:0,51,736	0/0:21,0:21:58.43:0,58,773	1/1:0,25:25:75.10:863,75,0	0/0:13,0:13:33.09:0,33,467	0/0:13,0:13:36.02:0,36,331	0/0:12,0:12:36.03:0,36,354	0/0:20,0:20:57.75:0,58,813	0/0:18,0:18:51.06:0,51,678	0/0:15,0:15:40.82:0,41,544	0/0:14,0:14:36.01:0,36,339	1/1:4,21:25:27.39:811,27,0	0/0:37,0:37:93.10:0,93,887	1/1:9,12:21:55.89:612,56,0	1/1:2,13:15:45.07:509,45,0	1/1:2,12:14:39.04:433,39,0	1/1:2,13:15:45.03:516,45,0	0/0:12,0:12:36.11:0,36,516	0/0:16,0:16:48.16:0,48,713	0/0:18,0:18:54.16:0,54,765	0/0:16,0:16:39.13:0,39,576	0/0:23,0:22:65.51:0,66,606	0/0:15,0:15:45.02:0,45,408	0/0:13,0:13:32.92:0,33,284
chr10	16847169	.	A	AT	3517.62	PASS	AB=0.609;AC=17;AF=0.304;AN=56;BaseQRankSum=-9.659;DP=509;FS=2.911;HRun=10;HaplotypeScore=87.5730;InbreedingCoeff=0.9364;MQ=87.03;MQ0=1;MQRankSum=0.311;QD=24.09;ReadPosRankSum=0.941;VQSLOD=3.8959;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:77.85:0,78,635	1/1:1,3:4:6.02:64,6,0	0/0:36,0:30:37.16:0,37,308	0/0:20,0:19:18.18:0,18,170	1/1:1,11:12:35.88:365,36,0	0/0:17,0:17:44.93:0,45,369	0/0:20,1:21:49.92:0,50,394	0/0:28,0:28:59.63:0,60,252	0/0:11,0:11:29.96:0,30,246	1/1:4,10:14:27.07:287,27,0	1/1:0,14:14:35.93:344,36,0	0/0:19,0:20:55.97:0,56,449	0/0:17,0:17:44.91:0,45,366	0/0:14,0:15:40.99:0,41,326	0/1:5,9:14:0.58:200,0,1	0/0:25,0:25:57.92:0,58,220	1/1:1,36:37:90.23:960,90,0	0/0:19,0:19:36.23:0,36,141	0/0:15,0:15:32.10:0,32,126	0/0:14,0:14:25.91:0,26,90	0/0:15,0:15:28.15:0,28,104	0/0:12,0:12:32.96:0,33,271	0/0:16,0:16:47.95:0,48,394	0/0:18,0:18:50.92:0,51,415	0/0:15,0:15:44.85:0,45,354	1/1:2,22:23:60.13:630,60,0	1/1:3,11:14:33.08:351,33,0	1/1:1,12:13:30.07:318,30,0
chr10	16847555	.	C	CA	1974.61	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=3.288;DP=578;FS=2.412;HRun=1;HaplotypeScore=353.2449;InbreedingCoeff=0.9858;MQ=39.61;MQ0=0;MQRankSum=-1.481;QD=10.73;ReadPosRankSum=1.089;VQSLOD=1.9852;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:63.48:0,63,444	1/1:5,0:5:13.81:64,14,0	0/0:10,0:10:24.07:0,24,282	0/0:7,0:7:17.97:0,18,195	1/1:20,2:23:40.67:204,41,0	0/0:21,0:21:59.23:0,59,402	0/0:18,0:18:51.55:0,52,310	0/0:32,0:32:83.11:0,83,560	0/0:25,0:26:63.81:0,64,439	1/1:20,1:21:59.40:308,59,0	1/1:19,1:20:34.73:145,35,0	0/0:27,0:27:75:0,75,510	0/0:32,0:32:76.72:0,77,532	0/0:23,0:23:58.02:0,58,374	1/1:31,0:31:81.06:351,81,0	0/0:28,0:28:62.67:0,63,431	1/1:18,0:18:48.97:222,49,0	0/0:18,0:18:50.47:0,50,363	0/0:13,0:13:14.02:0,14,192	0/0:12,0:12:18.38:0,18,124	0/0:25,0:25:16.46:0,16,131	0/0:19,0:19:29.85:0,30,240	0/0:11,0:11:17.73:0,18,116	0/0:17,0:17:17.92:0,18,134	0/0:24,0:24:52.39:0,52,335	1/1:28,0:28:79.58:408,80,0	1/1:29,1:30:75.06:389,75,0	1/1:8,0:8:22.02:99,22,0
chr10	16848139	.	TAGA	T	6121.21	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=13.740;DP=688;FS=2.074;HRun=0;HaplotypeScore=96.5548;InbreedingCoeff=0.9989;MQ=70.96;MQ0=0;MQRankSum=-5.359;QD=39.49;ReadPosRankSum=-0.670;VQSLOD=5.7383;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,120,2573	0/0:14,0:14:42.14:0,42,902	0/0:11,0:11:21.07:0,21,420	0/0:12,0:12:33.11:0,33,676	0/0:22,0:22:63.22:0,63,1375	0/0:20,0:20:51.18:0,51,1121	0/0:29,0:29:84.25:0,84,1738	1/1:3,38:41:99:1745,111,0	0/0:40,0:40:99:0,111,2316	0/0:25,0:25:72.23:0,72,1531	0/0:13,0:13:36.12:0,36,787	0/0:36,0:36:99:0,102,2230	0/0:22,0:22:63.22:0,63,1388	0/0:32,0:32:90.31:0,90,1955	0/0:27,0:27:78.27:0,78,1723	1/1:3,22:25:57.19:928,57,0	0/0:35,0:35:99:0,102,2180	1/1:2,22:24:54.18:869,54,0	1/1:1,14:15:42.14:681,42,0	1/1:1,24:25:66.23:1077,66,0	1/1:2,23:25:51.17:821,51,0	0/0:25,0:25:72.23:0,72,1526	0/0:10,0:10:27.09:0,27,586	0/0:39,0:39:99:0,114,2420	0/0:24,0:24:66.21:0,66,1432	0/0:20,0:20:57.18:0,57,1221	0/0:22,0:22:63.18:0,63,1359	0/0:13,0:13:39.13:0,39,805
chr10	16850061	.	GA	G	1487.46	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=16.680;DP=770;FS=2.296;HRun=2;HaplotypeScore=135.6463;InbreedingCoeff=0.9850;MQ=71.24;MQ0=0;MQRankSum=-0.869;QD=6.67;ReadPosRankSum=0.301;VQSLOD=0.7861;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,129,1999	1/1:20,0:20:14.91:92,15,0	0/0:11,0:11:32.78:0,33,491	0/0:15,0:15:38.99:0,39,552	1/1:17,1:18:14.83:125,15,0	0/0:24,0:24:72.25:0,72,1150	0/0:34,0:34:99:0,102,1579	0/0:31,0:31:91.09:0,91,1200	0/0:30,0:30:75.35:0,75,1248	1/1:29,1:30:35.14:238,35,0	1/1:12,2:14:13.57:121,14,0	0/0:40,0:40:99:0,120,1889	0/0:36,0:36:99:0,108,1719	0/0:41,0:41:99:0,123,1935	1/1:46,0:46:99:564,104,0	0/0:47,0:47:99:0,141,1949	1/1:40,0:40:59.11:255,59,0	0/0:27,0:27:78.24:0,78,1084	0/0:19,0:19:57.16:0,57,771	0/0:16,0:16:44.94:0,45,601	0/0:44,0:44:99:0,129,1817	0/0:18,0:18:54.17:0,54,838	0/0:15,0:15:45.14:0,45,696	0/0:38,0:38:99:0,114,1769	0/0:18,0:18:54.17:0,54,834	1/1:29,0:29:16.27:179,16,0	1/1:19,0:18:18.05:78,18,0	1/1:7,0:7:14.08:47,14,0
chr10	16850331	.	TGTGCGTGCGTGC	T	5387.94	PASS	AC=16;AF=0.296;AN=54;BaseQRankSum=10.293;DP=816;FS=19.404;HRun=0;HaplotypeScore=272.6653;InbreedingCoeff=0.9491;MQ=53.51;MQ0=14;MQRankSum=-9.167;QD=26.03;ReadPosRankSum=-0.758;VQSLOD=2.5415;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:30.10:0,30,1531	1/1:8,6:14:18.05:546,18,0	0/0:48,0:20:15.05:0,15,343	0/0:47,0:27:15.03:0,15,353	1/1:12,8:20:15.03:438,15,0	0/0:19,0:20:45.15:0,45,1771	0/0:45,0:45:78.25:0,78,3371	0/0:29,0:26:18.02:0,18,427	0/0:23,0:23:45.15:0,45,2559	1/1:25,13:38:24.07:698,24,0	1/1:9,3:12:9.03:312,9,0	0/0:45,0:45:90.31:0,90,4168	0/0:23,0:23:42.14:0,42,1989	0/0:47,0:47:87.30:0,87,4747	1/1:27,37:64:57.20:1977,57,0	0/0:17,0:32:33.11:0,33,799	./.	0/0:12,0:29:25.33:0,25,619	0/0:16,0:17:9.02:0,9,194	0/0:9,0:13:15.05:0,15,387	0/0:40,0:54:36.08:0,36,828	0/0:13,0:13:18.06:0,18,896	0/0:13,0:13:15.03:0,15,816	0/0:42,0:41:78.27:0,78,3995	0/0:16,0:15:21.07:0,21,957	1/1:16,8:24:21.06:579,21,0	1/1:8,15:23:18.06:609,18,0	1/1:9,3:12:8.99:228,9,0
chr10	16850582	.	GA	G	7667	PASS	AB=0.888;AC=32;AF=0.571;AN=56;BaseQRankSum=11.651;DP=672;FS=5.238;HRun=10;HaplotypeScore=73.0015;InbreedingCoeff=0.8652;MQ=75.55;MQ0=0;MQRankSum=-2.706;QD=19.31;ReadPosRankSum=1.746;VQSLOD=5.8529;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,1:45:99:0,100,1325	1/1:2,9:11:26.99:234,27,0	0/1:11,1:11:1.34:1,0,176	0/0:25,1:22:1.81:0,2,183	1/1:4,20:24:50.97:442,51,0	0/0:24,0:23:51.14:0,51,562	0/0:20,0:20:52.02:0,52,566	1/1:8,32:40:95.92:823,96,0	0/0:22,0:22:57.14:0,57,618	1/1:3,23:26:65.92:559,66,0	1/1:2,10:12:23.98:208,24,0	0/0:39,0:39:99:0,108,1194	0/0:30,0:31:90.01:0,90,951	0/0:25,0:26:72.03:0,72,777	1/1:7,44:51:99:989,114,0	1/1:4,29:33:86.98:755,87,0	1/1:3,27:30:68.97:599,69,0	1/1:4,26:30:74.97:651,75,0	1/1:0,15:15:44.99:391,45,0	1/1:4,12:16:32.99:286,33,0	1/1:4,21:25:53.99:469,54,0	0/0:14,0:14:33.08:0,33,358	0/1:8,1:9:8.01:8,0,148	0/0:18,0:18:22.06:0,22,456	0/0:10,0:10:30.07:0,30,325	1/1:4,28:32:80.96:703,81,0	1/1:6,10:16:30.45:262,30,0	1/1:2,11:13:32.99:286,33,0
chr10	16851311	.	CATCTGGGAAGA	C	8908.20	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=14.320;DP=723;FS=8.715;HRun=0;HaplotypeScore=230.1868;InbreedingCoeff=0.9874;MQ=88.80;MQ0=0;MQRankSum=-12.700;QD=73.02;ReadPosRankSum=2.000;VQSLOD=3.4689;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:96.27:0,96,5076	0/0:13,0:13:39.13:0,39,2173	0/0:26,0:26:66.70:0,67,3435	0/0:29,0:30:82.14:0,82,3978	0/0:36,0:36:99:0,108,5636	0/0:26,0:26:78.27:0,78,4378	0/0:23,0:23:69.24:0,69,3815	1/1:6,21:27:63.20:2069,63,0	0/0:29,0:29:84.29:0,84,4620	0/0:40,0:40:99:0,117,6276	0/0:26,0:26:75.26:0,75,4030	0/0:18,0:18:54.19:0,54,3113	0/0:23,0:23:69.24:0,69,3824	0/0:23,0:23:69.22:0,69,3728	0/0:47,0:47:99:0,138,7313	1/1:8,28:37:78.27:2783,78,0	0/0:28,0:28:84.29:0,84,4522	1/1:3,10:13:24.08:856,24,0	1/1:2,9:11:27.08:826,27,0	1/1:0,22:22:60.21:2141,60,0	1/1:4,8:12:8.99:234,9,0	0/0:22,0:22:66.23:0,66,3786	0/0:24,0:24:72.25:0,72,4060	0/0:44,0:44:99:0,132,7194	0/0:15,0:15:42.14:0,42,2408	0/0:30,0:30:87.30:0,87,4894	0/0:27,0:27:81.28:0,81,4232	0/0:18,0:18:51.17:0,51,2672
chr10	16852298	.	CA	C	11880.44	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=16.763;DP=514;FS=13.025;HRun=2;HaplotypeScore=82.4272;InbreedingCoeff=0.9996;MQ=78.74;MQ0=0;MQRankSum=-3.690;QD=36.33;ReadPosRankSum=2.008;VQSLOD=4.3516;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:75.25:0,75,1122	1/1:0,13:13:39.13:506,39,0	0/0:14,0:14:37.83:0,38,500	0/0:10,0:10:27.09:0,27,391	1/1:3,20:23:57.18:737,57,0	0/0:18,0:18:54.18:0,54,807	0/0:12,0:11:30.08:0,30,429	1/1:1,28:29:84.27:1091,84,0	0/0:20,0:20:60.19:0,60,878	1/1:1,21:22:63.20:818,63,0	1/1:0,11:11:33.11:429,33,0	0/0:21,0:21:63.21:0,63,943	0/0:12,0:12:36.12:0,36,540	0/0:19,0:19:57.19:0,57,853	1/1:1,19:20:57.19:740,57,0	1/1:0,21:21:63.20:818,63,0	1/1:0,26:26:75.24:974,75,0	1/1:1,27:28:69.22:896,69,0	1/1:1,21:22:62.98:743,63,0	1/1:0,15:15:42.14:545,42,0	1/1:0,14:14:33.11:428,33,0	0/0:13,0:13:33.11:0,33,495	0/0:12,0:12:36.12:0,36,540	0/0:11,0:11:33.11:0,33,495	1/1:0,23:23:66.21:857,66,0	1/1:1,20:21:60.19:779,60,0	1/1:0,16:16:48.16:623,48,0	1/1:0,23:23:69.22:896,69,0
chr10	16852480	.	T	TG	11005.51	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=-1.566;DP=505;FS=20.830;HRun=2;HaplotypeScore=57.4877;InbreedingCoeff=0.9964;MQ=57.29;MQ0=6;MQRankSum=-2.051;QD=37.18;ReadPosRankSum=1.563;VQSLOD=2.9198;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:93.29:0,93,1153	1/1:2,8:10:23.88:321,24,0	0/0:22,0:12:36.11:0,36,438	0/0:26,0:14:32.59:0,33,376	1/1:0,15:15:42.14:605,42,0	0/0:27,0:27:75.24:0,75,930	0/0:18,0:17:51.16:0,51,632	1/1:2,40:40:99:1681,120,0	0/0:13,0:13:36.11:0,36,446	1/1:0,11:11:33.11:475,33,0	1/1:1,10:11:24.04:322,24,0	0/0:17,0:17:51.16:0,51,632	0/0:10,0:10:30.06:0,30,345	0/0:15,0:15:33.10:0,33,408	1/1:1,11:12:30.10:432,30,0	1/1:0,9:9:27.06:367,27,0	1/1:4,24:28:60.19:846,60,0	1/1:1,33:34:96.31:1364,96,0	1/1:0,12:12:36.12:518,36,0	1/1:1,17:18:39.06:561,39,0	1/1:1,23:24:60.16:841,60,0	0/0:9,0:9:27.07:0,27,322	0/0:5,0:5:15.03:0,15,173	0/0:16,0:16:48.15:0,48,595	1/1:2,17:19:51.17:734,51,0	1/1:0,27:27:75.25:1074,75,0	1/1:0,12:11:27.09:389,27,0	1/1:0,11:11:33.11:475,33,0
chr10	16852626	.	AG	A	4614.96	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=13.743;DP=620;FS=0.000;HRun=6;HaplotypeScore=68.1316;InbreedingCoeff=0.9961;MQ=78.19;MQ0=0;MQRankSum=-3.459;QD=28.84;ReadPosRankSum=-0.861;VQSLOD=5.0149;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,102,1321	0/0:6,0:6:15.04:0,15,183	0/0:21,0:21:59.99:0,60,779	0/0:20,0:21:62.84:0,63,772	0/0:22,0:22:60.19:0,60,783	0/0:28,0:28:78.25:0,78,1026	0/0:26,0:26:75.24:0,75,985	1/1:5,37:41:99:1144,108,0	0/0:17,0:17:45.15:0,45,591	0/0:33,0:33:87.28:0,87,1144	0/0:10,0:10:30.10:0,30,394	0/0:21,0:21:57.17:0,57,733	0/0:17,0:17:51.17:0,51,671	0/0:30,0:30:84.24:0,84,1074	0/0:25,0:25:60.18:0,60,775	1/1:0,26:26:72.18:774,72,0	0/0:35,0:35:93.30:0,93,1223	1/1:0,17:17:48.12:516,48,0	1/1:1,15:16:48.10:504,48,0	1/1:1,10:11:33.08:355,33,0	1/1:1,24:25:63.16:677,63,0	0/0:19,0:19:54.18:0,54,711	0/0:10,0:10:30.10:0,30,395	0/0:16,0:16:48.16:0,48,632	1/1:2,21:23:60.15:645,60,0	0/0:29,0:29:78.25:0,78,1026	0/0:31,0:31:84.27:0,84,1105	0/0:7,0:7:21.07:0,21,276
chr10	16854475	.	TAC	T	491.51	PASS	AB=0.957;AC=26;AF=0.520;AN=50;BaseQRankSum=4.466;DP=629;FS=10.731;HRun=0;HaplotypeScore=86.3815;InbreedingCoeff=-0.0961;MQ=62.17;MQ0=6;MQRankSum=-1.465;QD=1.09;ReadPosRankSum=0.555;VQSLOD=0.1811;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:36,0:36:24.68:25,0,189	0/0:9,0:9:2.99:0,3,24	./.	./.	0/1:18,0:18:14.32:14,0,144	0/1:15,2:17:23.25:23,0,57	0/1:29,0:29:9.04:9,0,182	1/1:20,0:19:2.97:20,3,0	0/0:24,0:24:3.10:0,3,250	0/0:17,0:17:3.90:0,4,45	./.	0/1:28,0:28:16.15:16,0,176	0/1:15,0:16:25.64:92,0,26	0/1:22,1:23:23.53:24,0,36	0/1:31,6:37:16.32:16,0,211	1/1:14,0:20:17:83,17,0	0/1:34,3:36:13.49:13,0,162	1/1:14,0:24:10.89:50,11,0	1/1:20,0:20:11.75:94,12,0	1/1:13,0:13:2.84:14,3,0	1/1:42,19:64:14.53:106,15,0	0/0:21,0:21:14.16:0,14,148	0/1:10,0:11:8.13:8,0,36	0/0:29,0:29:13.55:0,14,513	1/1:12,0:15:2.84:14,3,0	0/0:24,0:24:17.99:0,18,179	0/1:17,0:17:11.18:11,0,212	0/1:5,0:5:12:16,0,12
chr10	16855089	.	CACA	C	1396.63	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=1.306;DP=330;FS=1.220;HRun=0;HaplotypeScore=63.8949;InbreedingCoeff=0.7848;MQ=74.46;MQ0=0;MQRankSum=-1.851;QD=20.24;ReadPosRankSum=0.081;VQSLOD=2.8637;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,1:21:22.34:0,22,444	1/1:4,0:4:12.04:196,12,0	0/0:11,0:7:21.03:0,21,356	0/0:16,0:13:35.92:0,36,527	1/1:1,3:4:9.03:115,9,0	0/0:12,0:12:14.31:0,14,253	0/0:26,2:28:1.54:0,2,421	0/0:19,0:19:51.13:0,51,744	0/0:11,0:11:19.99:0,20,261	1/1:0,2:2:6.02:87,6,0	1/1:3,0:3:9.03:142,9,0	0/1:16,0:16:5.13:5,0,197	0/0:14,0:14:20.72:0,21,339	0/0:24,0:24:14.11:0,14,587	1/1:0,12:12:4.56:44,5,0	0/0:12,1:13:18.37:0,18,315	1/1:14,0:14:39.07:554,39,0	0/0:16,0:16:28.50:0,29,308	0/0:7,0:7:19.62:0,20,295	0/0:5,0:5:12.04:0,12,173	0/0:16,1:17:39.09:0,39,593	0/0:12,0:12:21.03:0,21,339	0/0:5,0:5:8.38:0,8,104	0/0:15,0:15:30.79:0,31,341	0/0:15,0:15:24.69:0,25,262	1/1:3,0:4:6.01:61,6,0	1/1:8,0:8:21.05:285,21,0	1/1:2,0:2:6.02:99,6,0
chr10	16855091	.	CA	C	514.71	PASS	AB=0.867;AC=19;AF=0.339;AN=56;BaseQRankSum=5.284;DP=315;FS=2.060;HRun=1;HaplotypeScore=54.7127;InbreedingCoeff=0.7923;MQ=76.31;MQ0=1;MQRankSum=-0.872;QD=8.17;ReadPosRankSum=0.520;VQSLOD=0.9041;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:20.30:0,20,203	1/1:4,0:4:11.95:93,12,0	0/0:13,0:8:18.85:0,19,211	0/0:16,0:13:28.04:0,28,248	1/1:4,0:4:8.88:57,9,0	0/0:10,1:11:9.58:0,10,118	0/0:27,0:27:33.65:0,34,250	0/0:16,0:16:38.92:0,39,330	0/0:8,2:10:21.26:0,21,131	1/1:2,0:2:5.94:42,6,0	1/1:3,0:3:8.89:64,9,0	0/0:12,3:15:9.19:0,9,111	0/0:12,2:14:10.73:0,11,156	0/0:20,2:22:7.02:0,7,230	1/1:12,0:12:5.34:28,5,0	0/1:11,2:13:0.32:0,0,133	1/1:12,0:12:29.92:241,30,0	0/0:12,3:15:12.57:0,13,136	0/0:7,0:7:17.95:0,18,157	0/0:5,0:5:11.87:0,12,85	0/0:16,0:16:38.48:0,38,288	0/0:11,0:11:20.98:0,21,173	0/0:5,0:5:8.95:0,9,71	0/0:15,0:15:30.34:0,30,188	0/0:15,0:15:21.27:0,21,133	1/1:3,1:4:2.93:18,3,0	1/1:6,1:7:16.76:111,17,0	1/1:2,0:2:5.99:48,6,0
chr10	16855101	.	CCCCCCG	C	1448.98	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=6.946;DP=308;FS=14.339;HRun=0;HaplotypeScore=69.5014;InbreedingCoeff=0.1209;MQ=73.41;MQ0=1;MQRankSum=-5.647;QD=6.97;ReadPosRankSum=7.996;VQSLOD=-0.3168;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:14:12.84:117,13,0	0/0:1,0:1:3:0,3,27	0/0:13,0:7:21:0,21,302	0/0:14,0:11:19.97:0,20,388	0/0:5,0:5:2.97:0,3,20	1/1:11,1:12:26.19:231,26,0	1/1:21,2:23:20.53:354,21,0	0/0:7,0:7:6.01:0,6,63	0/1:14,0:14:16.59:40,0,17	0/0:4,0:4:6.01:0,6,58	0/0:2,0:2:3:0,3,27	0/1:18,0:18:23.64:141,0,24	0/1:13,0:13:45.41:125,0,45	0/1:18,0:18:24.72:25,0,121	0/0:7,0:7:0:0,0,0	0/1:12,0:12:15.22:15,0,109	0/0:13,0:13:36.02:0,36,457	0/1:17,0:17:72.06:72,0,133	0/1:6,0:6:25.62:33,0,26	0/1:10,0:10:44.83:45,0,110	0/1:13,0:13:63:63,0,76	0/0:17,0:17:2.99:0,3,24	1/1:7,1:8:2.83:18,3,0	1/1:16,0:16:18.32:149,18,0	1/1:1,13:14:7.38:193,7,0	0/0:8,0:8:11.91:0,12,97	0/0:8,0:8:18.02:0,18,213	0/0:1,0:1:2.94:0,3,18
chr10	16855102	.	CCCCCG	C	2875.75	PASS	AB=0.907;AC=28;AF=0.500;AN=56;BaseQRankSum=4.764;DP=287;FS=0.637;HRun=0;HaplotypeScore=56.6861;InbreedingCoeff=0.4393;MQ=73.14;MQ0=1;MQRankSum=-4.581;QD=13.56;ReadPosRankSum=8.004;VQSLOD=1.3981;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,10:13:13.44:250,13,0	0/0:1,0:1:3:0,3,27	0/0:13,0:7:21.05:0,21,296	0/0:13,0:10:17.38:0,17,270	0/0:4,0:4:5.93:0,6,40	1/1:8,2:10:26.39:337,26,0	1/1:5,16:21:39.03:667,39,0	0/1:8,0:8:13.84:19,0,14	1/1:3,9:12:5.94:115,6,0	0/0:7,0:7:14.99:0,15,135	0/0:2,0:2:3:0,3,27	1/1:5,12:17:20.94:367,21,0	1/1:6,3:9:17.93:318,18,0	1/1:6,9:15:5.80:115,6,0	0/0:4,0:4:0:0,0,0	0/1:12,0:12:43.82:95,0,44	0/0:13,0:13:35.96:0,36,392	0/1:17,1:19:45.30:155,0,45	1/1:5,0:5:8.48:54,8,0	0/1:10,0:10:56.22:56,0,67	0/1:11,0:11:10.60:64,0,11	0/1:2,13:15:0:0,0,0	1/1:1,6:7:2.90:18,3,0	1/1:1,13:14:18.46:314,18,0	1/1:14,0:14:7.81:116,8,0	0/0:8,0:8:11.93:0,12,98	0/0:8,0:8:19.09:0,19,187	0/0:2,0:2:5.94:0,6,44
chr10	16855103	.	CCCCG	C	2407.37	PASS	AB=0.969;AC=32;AF=0.593;AN=54;BaseQRankSum=4.706;DP=271;FS=4.419;HRun=0;HaplotypeScore=52.6627;InbreedingCoeff=0.7167;MQ=75.88;MQ0=1;MQRankSum=-5.085;QD=12.16;ReadPosRankSum=7.828;VQSLOD=1.4868;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,0:12:14.69:154,15,0	0/0:1,0:1:3:0,3,27	0/0:14,0:8:23.91:0,24,248	0/0:13,0:10:16.33:0,16,227	0/0:3,0:3:5.93:0,6,40	1/1:8,1:9:26.81:235,27,0	1/1:20,0:21:39.05:441,39,0	1/1:6,1:7:5.93:48,6,0	1/1:9,2:11:5.98:66,6,0	0/0:7,0:7:18:0,18,163	0/0:2,0:2:3:0,3,27	1/1:12,3:15:21.01:220,21,0	1/1:4,2:6:18.04:195,18,0	1/1:9,2:11:5.98:67,6,0	./.	1/1:5,7:12:17.94:313,18,0	0/0:13,0:13:35.95:0,36,352	1/1:9,9:18:20.95:320,21,0	1/1:5,0:5:7.14:48,7,0	0/1:14,1:15:4.88:73,0,5	1/1:8,0:8:11.69:110,12,0	0/1:14,0:14:0:0,0,0	1/1:7,0:7:2.86:18,3,0	1/1:13,0:13:17.83:190,18,0	1/1:14,0:14:8.33:99,8,0	0/0:8,0:8:11.93:0,12,97	0/0:8,0:8:14.92:0,15,145	0/0:2,0:2:5.94:0,6,44
chr10	16855104	.	CCCG	C	1904.18	PASS	AB=1.000;AC=33;AF=0.589;AN=56;BaseQRankSum=5.217;DP=265;FS=10.016;HRun=0;HaplotypeScore=50.6676;InbreedingCoeff=0.7688;MQ=77.16;MQ0=1;MQRankSum=-4.813;QD=10.13;ReadPosRankSum=7.638;VQSLOD=0.5924;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,0:12:14.93:131,15,0	0/0:1,0:1:3:0,3,27	0/0:14,0:8:19.28:0,19,152	0/0:12,0:10:14.13:0,14,166	0/0:3,0:3:5.93:0,6,40	1/1:9,0:9:26.79:211,27,0	1/1:21,0:21:39.01:357,39,0	1/1:7,0:7:5.95:48,6,0	1/1:11,0:11:5.98:54,6,0	0/0:9,0:9:23.96:0,24,211	0/0:3,0:3:6:0,6,54	1/1:15,0:15:20.97:185,21,0	1/1:6,0:6:18.02:165,18,0	1/1:11,0:11:5.98:57,6,0	0/0:3,0:3:2.97:0,3,20	1/1:8,2:10:18:175,18,0	0/0:13,0:13:35.95:0,36,329	1/1:11,3:14:20.98:192,21,0	1/1:5,0:5:8.34:70,8,0	1/1:1,12:13:11.86:104,12,0	1/1:7,0:7:11.73:89,12,0	0/1:14,0:14:0:0,0,0	1/1:7,0:7:2.85:17,3,0	1/1:13,0:13:17.99:162,18,0	1/1:13,0:13:9:82,9,0	0/0:8,0:8:11.93:0,12,97	0/0:8,0:8:19.69:0,20,165	0/0:2,0:2:5.94:0,6,44
chr10	16858895	.	CAAA	C	1911.73	PASS	AB=0.796;AC=15;AF=0.268;AN=56;BaseQRankSum=-0.637;DP=574;FS=5.170;HRun=18;HaplotypeScore=92.3593;InbreedingCoeff=0.6912;MQ=77.27;MQ0=1;MQRankSum=-2.408;QD=10.80;ReadPosRankSum=5.620;VQSLOD=0.1963;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:33:58.22:0,58,619	0/0:6,0:13:14.53:0,15,247	0/0:41,0:13:14.54:0,15,122	0/1:23,0:19:4.37:4,0,153	0/0:10,0:20:36.34:0,36,452	0/0:0,0:11:23.41:0,23,164	0/1:11,0:17:6.34:6,0,157	1/1:7,18:29:25.66:511,26,0	0/0:6,0:11:11.98:0,12,105	0/0:21,0:22:41.67:0,42,542	0/0:9,0:20:40:0,40,434	0/0:14,0:20:26.48:0,26,259	0/0:11,0:13:22.21:0,22,232	0/0:13,0:15:29.76:0,30,306	0/0:8,0:18:27.09:0,27,373	1/1:2,12:17:25.59:383,26,0	0/0:11,0:28:15.45:0,15,184	1/1:5,10:14:1.14:173,1,0	1/1:8,12:22:37.16:362,37,0	1/1:6,13:20:30.99:309,31,0	0/1:6,6:13:26.18:75,0,26	0/0:8,0:16:30.21:0,30,293	0/0:15,0:23:33.45:0,33,360	0/0:9,1:17:7.62:0,8,340	1/1:6,9:18:30.06:271,30,0	0/0:21,0:36:71.31:0,71,887	0/0:11,0:25:27.56:0,28,368	0/0:9,0:14:30.07:0,30,412
chr10	16861683	.	G	GT	5983.79	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-11.594;DP=735;FS=18.372;HRun=8;HaplotypeScore=79.7218;InbreedingCoeff=0.9952;MQ=80.41;MQ0=5;MQRankSum=-1.962;QD=27.32;ReadPosRankSum=5.612;VQSLOD=3.4638;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,31:37:92.94:1030,93,0	0/0:7,0:7:15.01:0,15,137	0/0:60,0:37:35.95:0,36,392	0/0:70,2:36:16.22:0,16,342	0/0:21,0:21:63.02:0,63,571	1/1:3,22:25:26.83:561,27,0	1/1:4,12:16:24.07:277,24,0	0/0:33,0:32:81.01:0,81,732	1/1:1,15:16:42.12:485,42,0	0/0:24,0:24:63.01:0,63,572	0/0:19,0:19:50.71:0,51,435	1/1:2,21:23:57.17:657,57,0	1/1:0,14:14:36.11:416,36,0	1/1:1,16:17:42.12:485,42,0	0/0:27,0:27:72.01:0,72,654	0/0:31,0:31:89.99:0,90,805	0/0:44,0:44:99:0,111,1039	0/0:24,0:24:68.96:0,69,621	0/0:24,0:24:60.01:0,60,542	0/0:23,0:23:34.67:0,35,471	0/0:12,0:12:33.02:0,33,302	1/1:3,16:19:45.13:517,45,0	1/1:2,18:20:54.16:623,54,0	1/1:1,31:32:81.24:935,81,0	0/0:19,0:19:48.02:0,48,439	0/0:27,0:27:63:0,63,569	0/0:35,0:34:90.02:0,90,819	0/0:12,0:12:33.01:0,33,302
chr10	16861842	.	C	CA	9327.16	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-17.720;DP=746;FS=2.892;HRun=4;HaplotypeScore=65.9229;InbreedingCoeff=0.9964;MQ=86.17;MQ0=0;MQRankSum=-6.191;QD=34.42;ReadPosRankSum=1.591;VQSLOD=5.5536;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,39:41:99:1415,105,0	0/0:6,0:6:15.04:0,15,170	0/0:29,0:29:66.18:0,66,748	0/0:21,0:21:42.12:0,42,475	0/0:26,0:26:78.22:0,78,885	1/1:4,17:21:48.16:657,48,0	1/1:2,38:40:99:1471,108,0	0/0:36,0:36:96.24:0,96,1065	1/1:2,22:24:48.16:657,48,0	0/0:23,0:23:66.16:0,66,736	0/0:16,0:16:48.14:0,48,544	1/1:1,26:27:66.22:903,66,0	1/1:0,16:16:36.12:492,36,0	1/1:2,29:31:84.28:1149,84,0	0/0:29,0:29:81.20:0,81,900	0/0:40,0:40:99:0,120,1338	0/0:44,0:44:99:0,117,1350	0/0:38,0:38:99:0,114,1268	0/0:21,0:21:51.14:0,51,579	0/0:25,0:25:72.20:0,72,816	0/0:31,0:31:78.22:0,78,884	1/1:3,15:18:39.13:533,39,0	1/1:0,17:17:45.15:615,45,0	1/1:1,35:36:99:1436,105,0	0/0:31,0:31:87.23:0,87,977	0/0:26,0:26:78.22:0,78,885	0/0:27,0:27:78.21:0,78,873	0/0:6,0:6:18.05:0,18,204
chr10	16862191	.	TAAA	T	4509.17	PASS	AB=0.628;AC=21;AF=0.375;AN=56;BaseQRankSum=-0.012;DP=610;FS=18.142;HRun=16;HaplotypeScore=104.5305;InbreedingCoeff=0.8660;MQ=73.71;MQ0=1;MQRankSum=-0.917;QD=19.19;ReadPosRankSum=5.337;VQSLOD=2.1767;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,32:43:85.27:904,85,0	0/0:7,0:7:18.06:0,18,305	0/0:27,0:18:20.65:0,21,248	0/0:19,0:15:8.99:0,9,90	0/0:22,0:27:75.21:0,75,1200	1/1:0,10:10:30.08:323,30,0	1/1:3,18:22:56.99:599,57,0	0/0:9,0:34:5.95:0,6,93	1/1:3,14:18:41.97:437,42,0	0/0:21,0:24:54.10:0,54,771	0/0:15,0:18:51.04:0,51,748	1/1:7,20:30:61.27:643,61,0	1/1:2,12:14:20.39:225,20,0	1/1:5,21:26:41.74:452,42,0	0/0:16,0:19:54.14:0,54,879	0/0:6,0:27:21.18:0,21,47	0/0:24,0:29:75.17:0,75,1156	0/0:2,0:16:14.95:0,15,33	0/0:7,0:17:0.95:0,1,111	0/1:11,2:27:10.10:56,0,10	0/0:4,0:18:14.95:0,15,33	1/1:1,11:14:31.51:338,32,0	1/1:2,9:13:19.76:209,20,0	1/1:2,16:18:30.04:323,30,0	0/0:8,0:22:37.13:0,37,307	0/0:20,0:25:51.13:0,51,802	0/0:22,0:26:60.14:0,60,929	0/0:16,0:19:33.07:0,33,517
chr10	16863956	.	CTTTT	C	2879.38	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=0.854;DP=595;FS=0.933;HRun=18;HaplotypeScore=112.3790;InbreedingCoeff=0.9534;MQ=69.80;MQ0=3;MQRankSum=-0.046;QD=13.71;ReadPosRankSum=8.824;VQSLOD=-0.0793;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,22:37:32.58:406,33,0	0/0:6,0:8:12.04:0,12,165	0/0:26,0:16:31.68:0,32,367	0/0:18,0:12:14.49:0,14,139	0/0:15,0:18:27.06:0,27,389	1/1:4,14:21:32.70:358,33,0	1/1:9,11:23:29.24:337,29,0	0/0:35,0:37:78.13:0,78,1099	1/1:5,9:15:20.86:235,21,0	0/0:17,0:20:31.54:0,32,357	0/0:9,0:16:36.80:0,37,364	1/1:5,16:22:37.47:451,37,0	1/1:11,10:21:14.39:182,14,0	1/1:7,7:15:9.89:144,10,0	0/0:16,0:23:41.47:0,41,548	0/0:25,0:27:64.37:0,64,892	0/0:12,0:21:38.92:0,39,523	0/0:21,0:24:59.10:0,59,727	0/0:22,0:23:48.09:0,48,593	0/0:17,0:19:33.92:0,34,451	0/0:23,0:24:48.06:0,48,648	1/1:8,9:17:24.77:257,25,0	1/1:4,10:17:15.36:217,15,0	1/1:6,15:22:41.92:506,42,0	0/0:16,0:17:39.13:0,39,709	0/0:18,0:24:44.85:0,45,479	0/0:14,0:25:38.87:0,39,438	0/0:10,0:10:0:0,0,0
chr10	16863974	.	T	TA	2115.50	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=4.266;DP=596;FS=2.923;HRun=1;HaplotypeScore=91.7964;InbreedingCoeff=0.9653;MQ=75.27;MQ0=3;MQRankSum=0.667;QD=14.59;ReadPosRankSum=-0.943;VQSLOD=2.9117;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:70.78:0,71,466	0/0:6,0:6:14.81:0,15,105	0/0:34,0:26:49.82:0,50,351	0/0:19,0:10:12.40:0,12,94	0/0:19,0:19:50.66:0,51,387	0/0:24,0:24:53.22:0,53,363	0/0:22,0:22:59.06:0,59,393	1/1:35,3:37:80.34:624,80,0	0/0:18,0:18:44.34:0,44,303	0/0:15,0:15:44.50:0,44,339	0/0:19,0:19:47.23:0,47,330	0/0:22,0:22:50.01:0,50,322	0/0:21,0:21:43.48:0,43,284	0/0:15,0:15:32.54:0,33,218	0/0:21,0:21:59.44:0,59,429	1/1:27,0:27:65.25:446,65,0	0/0:26,0:26:59.50:0,59,437	1/1:19,1:20:39.09:303,39,0	1/1:18,0:18:14.04:321,14,0	1/1:7,13:20:43.52:262,44,0	1/1:22,0:22:44.74:346,45,0	0/0:20,0:20:50.37:0,50,360	0/0:22,0:22:47.28:0,47,335	0/0:23,0:23:59.07:0,59,384	0/0:14,0:14:38.93:0,39,332	0/0:26,0:26:74.37:0,74,569	0/0:22,0:22:44.16:0,44,303	0/0:2,0:2:5.83:0,6,37
chr10	16863979	.	C	CT	2416.15	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=4.782;DP=574;FS=0.000;HRun=0;HaplotypeScore=86.2378;InbreedingCoeff=0.9271;MQ=76.28;MQ0=2;MQRankSum=-0.484;QD=15.20;ReadPosRankSum=-2.692;VQSLOD=4.0403;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:69.22:0,69,928	0/0:5,0:5:15.01:0,15,187	0/0:33,0:24:52.56:0,53,673	0/1:20,0:12:3.04:3,0,205	0/0:22,0:22:60.09:0,60,772	0/0:22,0:22:54.17:0,54,733	0/0:19,0:19:54.18:0,54,742	1/1:33,3:35:84.78:732,85,0	0/0:18,0:18:45.08:0,45,574	0/0:15,0:15:42.07:0,42,530	0/0:15,0:15:33.11:0,33,459	0/0:21,0:21:48.11:0,48,622	0/0:22,0:22:39.02:0,39,523	0/0:13,0:13:31.35:0,31,420	0/0:22,0:22:60.10:0,60,770	1/1:25,0:25:62.32:486,62,0	0/0:24,0:24:57.10:0,57,750	1/1:19,0:19:39.20:300,39,0	1/1:17,0:17:46.99:379,47,0	1/1:18,1:19:44.10:309,44,0	1/1:23,0:23:48.38:395,48,0	0/0:22,0:22:56.92:0,57,736	0/0:19,0:19:45.15:0,45,617	0/0:24,0:24:63.16:0,63,839	0/0:14,0:14:39.05:0,39,500	0/0:26,0:26:78.05:0,78,978	0/0:18,0:18:39.04:0,39,518	0/0:9,0:9:18:0,18,180
chr10	16864506	.	GGATA	G	5993.19	PASS	AB=0.553;AC=11;AF=0.196;AN=56;BaseQRankSum=10.462;DP=718;FS=4.670;HRun=0;HaplotypeScore=151.3817;InbreedingCoeff=0.9089;MQ=85.24;MQ0=0;MQRankSum=-8.394;QD=38.67;ReadPosRankSum=-2.123;VQSLOD=4.5566;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,111,2794	0/0:9,0:9:18.03:0,18,410	0/0:25,0:26:55.43:0,55,1314	0/0:33,0:33:84.29:0,84,1976	0/0:25,0:25:51:0,51,1320	0/0:20,0:20:39.13:0,39,1013	0/0:19,0:19:42.14:0,42,1090	1/1:4,33:37:99:1768,99,0	0/0:31,0:31:90.31:0,90,2227	0/0:29,0:29:78.27:0,78,2025	0/0:18,0:18:36.59:0,37,934	0/0:30,0:30:75.26:0,75,1908	0/0:27,0:27:48.16:0,48,1212	0/0:26,0:26:54.19:0,54,1402	0/0:40,0:39:99:0,117,2992	1/1:4,24:28:69.19:1206,69,0	0/0:35,0:34:96.13:0,96,2323	0/1:4,17:21:5.84:605,0,6	1/1:2,14:16:30.10:513,30,0	1/1:3,21:23:54.19:970,54,0	1/1:6,23:29:53.58:931,54,0	0/0:20,0:20:42.14:0,42,1025	0/0:16,0:16:33.11:0,33,821	0/0:22,0:22:49.42:0,49,1322	0/0:22,0:22:51.18:0,51,1325	0/0:34,0:34:93.32:0,93,2364	0/0:26,0:24:75.26:0,75,1929	0/0:9,0:9:21.07:0,21,536
chr10	16864568	.	G	GGCTGGATA	4607.28	PASS	AB=0.954;AC=15;AF=0.268;AN=56;BaseQRankSum=3.038;DP=744;FS=2.842;HRun=0;HaplotypeScore=275.7055;InbreedingCoeff=-0.2418;MQ=42.69;MQ0=9;MQRankSum=-8.096;QD=11.84;ReadPosRankSum=5.745;VQSLOD=3.2260;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:96.37:0,96,1036	0/0:14,0:14:0.99:0,1,60	0/0:22,0:10:23.89:0,24,338	0/0:21,0:10:17.77:0,18,222	0/1:20,0:20:14.21:14,0,46	0/1:22,0:22:3.38:3,0,33	0/0:29,0:29:25.33:0,25,709	0/1:54,0:47:99:1369,0,156	0/0:29,0:29:38.42:0,38,509	0/1:25,0:25:19.25:19,0,407	0/0:23,0:21:3.50:0,3,330	0/1:33,0:33:8.52:9,0,473	0/1:24,0:24:6.39:6,0,81	0/0:28,0:28:3.02:0,3,140	0/0:49,0:49:34.74:0,35,871	0/1:34,9:43:99:1366,0,166	0/1:25,0:24:16.98:17,0,403	0/1:16,3:19:83.60:706,0,84	0/1:15,2:17:36.16:633,0,36	0/1:18,5:22:23.49:23,0,125	1/1:25,3:28:9.17:244,9,0	0/0:28,0:28:31.47:0,31,398	0/0:17,0:17:3.01:0,3,34	0/0:19,0:19:31.63:0,32,324	0/0:29,0:29:84.25:0,84,1872	0/1:32,0:32:65.38:65,0,643	0/1:24,0:22:99:131,0,213	0/0:1,0:1:2.96:0,3,19
chr10	16864576	.	G	GGATAGATGGATGGATGGACA	24481.60	PASS	AB=0.543;AC=49;AF=0.875;AN=56;BaseQRankSum=5.553;DP=766;FS=9.706;HRun=0;HaplotypeScore=342.0885;InbreedingCoeff=0.7313;MQ=44.47;MQ0=8;MQRankSum=-5.290;QD=35.12;ReadPosRankSum=0.136;VQSLOD=2.1157;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:43,0:43:73.89:1876,74,0	1/1:3,0:19:5.71:249,6,0	0/0:21,0:11:14.33:0,14,491	0/0:17,0:9:18.80:0,19,362	1/1:20,0:24:9.03:218,9,0	1/1:4,20:30:5.97:226,6,0	1/1:26,0:26:57.15:1123,57,0	1/1:57,0:51:99:1705,112,0	1/1:28,0:28:72.11:1780,72,0	1/1:26,0:26:65.24:1384,65,0	1/1:20,0:21:29.82:583,30,0	1/1:32,0:32:63.16:1654,63,0	1/1:0,22:29:3.01:229,3,0	1/1:2,22:32:3.01:81,3,0	1/1:39,0:47:92.62:2013,93,0	1/1:35,0:44:99:2344,108,0	1/1:21,0:22:53.74:1177,54,0	1/1:13,0:18:20.99:1288,21,0	1/1:14,0:15:36.56:727,37,0	1/1:19,0:22:33.10:681,33,0	1/1:26,0:26:18.06:379,18,0	1/1:29,0:29:42.61:947,43,0	0/1:4,15:25:0:0,0,0	1/1:19,0:19:33.58:705,34,0	0/0:31,0:31:87.30:0,87,3180	1/1:29,0:32:78.27:1819,78,0	1/1:16,0:23:48.16:1234,48,0	1/1:3,0:3:3.01:60,3,0
chr10	16864578	.	A	ACAGA	12260.50	PASS	AB=1.000;AC=37;AF=0.661;AN=56;BaseQRankSum=-0.255;DP=749;FS=2.484;HRun=0;HaplotypeScore=218.5319;InbreedingCoeff=0.0935;MQ=44.72;MQ0=7;MQRankSum=-1.832;QD=18.86;ReadPosRankSum=6.248;VQSLOD=4.4844;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:42,0:42:31.78:937,0,32	1/1:17,0:17:6.02:115,6,0	0/0:23,0:13:16.83:0,17,380	0/0:19,0:12:18.78:0,19,334	1/1:14,11:27:8.61:125,9,0	1/1:26,0:26:3.01:59,3,0	0/1:26,0:26:35.59:543,0,36	0/1:56,0:50:99:889,0,279	0/1:26,0:26:22.82:633,0,23	0/1:27,0:27:45.69:696,0,46	1/1:22,0:20:16.93:383,17,0	1/1:33,0:33:54.11:974,54,0	1/1:21,0:21:3.01:60,3,0	1/1:25,0:25:3.01:57,3,0	0/1:48,0:48:8.74:987,0,9	1/1:43,0:43:26.20:1189,26,0	0/1:24,0:23:17.52:455,0,18	0/1:19,0:19:14.13:626,0,14	1/1:16,0:16:1.50:337,1,0	1/1:23,0:22:32.08:553,32,0	1/1:27,0:27:6.15:189,6,0	1/1:28,0:28:19.49:704,19,0	0/0:23,0:23:0:0,0,0	1/1:19,0:19:26.19:451,26,0	0/0:31,0:31:90.27:0,90,1557	0/1:31,0:31:99:838,0,140	1/1:24,0:23:20.42:464,20,0	0/0:3,0:3:2.96:0,3,19
chr10	16864580	.	A	AGATGGATGGATG	5256.47	PASS	AB=0.987;AC=23;AF=0.411;AN=56;BaseQRankSum=1.260;DP=748;FS=23.083;HRun=0;HaplotypeScore=325.3147;InbreedingCoeff=-0.5691;MQ=45.43;MQ0=6;MQRankSum=-10.342;QD=8.79;ReadPosRankSum=-3.077;VQSLOD=1.7472;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:40,0:40:99:295,0,701	0/1:12,0:12:11.96:28,0,12	0/0:22,0:12:35.91:0,36,494	0/0:21,0:15:33.47:0,33,432	0/1:27,0:27:13.61:14,0,91	0/1:27,0:27:73.05:73,0,107	0/1:25,0:25:99:261,0,469	0/1:55,0:50:99:239,0,622	0/1:27,0:27:99:836,0,246	0/1:28,0:28:99:389,0,509	0/1:23,0:21:11.14:11,0,318	0/1:24,9:34:99:272,0,461	1/1:21,0:21:3.01:121,3,0	0/1:26,0:26:6.10:6,0,19	0/1:48,0:48:99:432,0,538	0/1:43,0:43:99:493,0,557	0/1:24,0:23:99:131,0,380	0/1:19,0:19:99:235,0,182	0/1:17,0:17:99:195,0,210	0/0:24,0:24:34.95:0,35,475	0/1:27,0:27:55.69:56,0,175	0/0:20,2:28:37.51:0,38,456	0/0:24,0:24:5.87:0,6,50	0/1:18,1:19:53.84:54,0,288	0/0:31,0:31:90.25:0,90,2260	0/1:29,0:29:99:450,0,437	0/1:24,0:23:99:615,0,136	0/1:3,0:3:37.97:51,0,38
chr10	16864885	.	G	GAT	9471.28	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-0.994;DP=583;FS=8.779;HRun=0;HaplotypeScore=175.9022;InbreedingCoeff=0.9991;MQ=83.40;MQ0=3;MQRankSum=-9.947;QD=44.47;ReadPosRankSum=1.680;VQSLOD=4.4706;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,21:22:54.19:1007,54,0	0/0:18,0:18:54.07:0,54,758	0/0:28,0:28:77.90:0,78,1052	0/0:23,0:23:54.18:0,54,772	0/0:17,0:17:48.14:0,48,678	1/1:2,23:25:69.24:1287,69,0	1/1:3,22:25:60.21:1120,60,0	0/0:26,0:26:75.25:0,75,1103	1/1:2,21:23:54.19:1008,54,0	0/0:26,0:26:75.23:0,75,1063	0/0:12,0:11:33.11:0,33,485	1/1:3,13:16:39.13:688,39,0	1/1:5,17:22:51.17:951,51,0	1/1:3,24:26:69.24:1253,69,0	0/0:32,0:32:90.29:0,90,1297	0/0:24,0:24:63.21:0,63,920	0/0:15,0:15:36.12:0,36,516	0/0:26,0:26:66.20:0,66,949	0/0:15,0:15:42.12:0,42,578	0/0:20,0:20:51.09:0,51,715	0/0:12,0:12:27.09:0,27,397	1/1:1,13:14:39.13:728,39,0	1/1:4,16:21:48.16:871,48,0	1/1:1,14:16:29.96:559,30,0	0/0:19,0:19:51.16:0,51,731	0/0:24,0:24:69.19:0,69,985	0/0:25,0:25:69.23:0,69,995	0/0:7,0:7:21.07:0,21,309
chr10	16867121	.	A	AC	20059.38	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-1.339;DP=640;FS=24.449;HRun=3;HaplotypeScore=87.3410;InbreedingCoeff=0.9376;MQ=89.70;MQ0=0;MQRankSum=-8.900;QD=34.89;ReadPosRankSum=5.694;VQSLOD=2.8793;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,29:30:69.23:966,69,0	1/1:1,13:14:36.08:473,36,0	0/0:22,0:22:63.16:0,63,728	0/0:25,0:25:66.19:0,66,781	1/1:1,16:17:42.14:587,42,0	1/1:2,13:15:39.13:546,39,0	1/1:2,38:40:99:1511,108,0	1/1:2,20:22:60.20:839,60,0	1/1:1,18:19:42.14:587,42,0	1/1:1,24:25:72.21:986,72,0	1/1:2,8:10:27.07:347,27,0	1/1:2,17:19:42.14:582,42,0	1/1:0,22:22:54.18:755,54,0	1/1:0,28:28:69.23:966,69,0	1/1:2,30:31:72.24:1008,72,0	1/1:1,32:33:83.83:1153,84,0	1/1:1,28:29:72.24:1008,72,0	1/1:0,35:35:81.27:1129,81,0	1/1:0,13:13:39.13:546,39,0	1/1:0,18:18:54.18:756,54,0	1/1:2,44:46:99:1553,111,0	1/1:3,8:11:18.06:251,18,0	1/1:2,16:18:42.14:588,42,0	1/1:0,36:36:96.07:1344,96,0	0/0:18,0:17:45.12:0,45,526	1/1:0,21:21:60.18:821,60,0	1/1:0,21:21:51.17:714,51,0	1/1:0,1:1:3.01:42,3,0
chr10	16868959	.	T	TCTC	38887.74	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-9.390;DP=801;FS=0.485;HRun=0;HaplotypeScore=101.6271;InbreedingCoeff=0.9991;MQ=74.99;MQ0=0;MQRankSum=-10.425;QD=52.62;ReadPosRankSum=4.004;VQSLOD=7.1568;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,47:52:99:2743,118,0	1/1:1,6:8:24.08:534,24,0	0/0:17,0:17:48.12:0,48,722	0/0:26,0:27:77.60:0,78,1123	1/1:4,16:20:38.96:793,39,0	1/1:0,30:29:75.19:1675,75,0	1/1:3,24:29:75.15:1620,75,0	1/1:3,30:36:99:2019,102,0	1/1:3,21:25:57.15:1250,57,0	1/1:0,32:34:99:2166,102,0	1/1:1,13:14:34.98:660,35,0	1/1:1,31:32:90.31:2060,90,0	1/1:2,33:36:93.24:2090,93,0	1/1:6,33:40:78.27:1795,78,0	1/1:1,34:35:90.13:2045,90,0	1/1:2,41:43:93.25:2065,93,0	1/1:2,26:31:54.19:1241,54,0	1/1:3,37:39:35.78:1786,36,0	1/1:6,13:21:48.04:873,48,0	1/1:0,16:16:48.16:1064,48,0	1/1:3,39:44:99:2220,102,0	1/1:1,19:21:50.96:1021,51,0	1/1:3,11:14:39.01:711,39,0	1/1:1,39:41:81.19:1814,81,0	0/0:18,0:18:54.18:0,54,918	1/1:4,33:37:99:2327,105,0	1/1:2,25:27:66.10:1487,66,0	1/1:0,12:12:36.12:829,36,0
chr10	16869070	.	CT	C	17725.22	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=8.887;DP=760;FS=6.232;HRun=1;HaplotypeScore=85.0832;InbreedingCoeff=0.9997;MQ=75.03;MQ0=2;MQRankSum=-1.739;QD=37.16;ReadPosRankSum=3.883;VQSLOD=5.3517;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,44:44:99:1571,114,0	0/0:11,0:11:33.11:0,33,526	0/0:15,1:16:27.53:0,28,397	0/0:21,0:21:43.15:0,43,550	0/0:27,0:27:78.27:0,78,1243	1/1:0,23:23:60.20:839,60,0	1/1:0,33:33:84.24:1152,84,0	1/1:1,28:29:78.23:1036,78,0	1/1:0,26:26:75.25:1049,75,0	0/0:24,0:24:69.22:0,69,1078	0/0:13,0:13:39.03:0,39,563	1/1:0,25:25:63.21:880,63,0	1/1:1,29:30:78.26:1091,78,0	1/1:1,30:31:90.30:1247,90,0	0/0:36,0:36:99:0,108,1663	1/1:0,37:37:99:1385,99,0	0/0:49,0:49:99:0,141,2220	1/1:0,28:28:72.24:1006,72,0	1/1:0,20:20:60.19:823,60,0	1/1:0,16:16:36.12:503,36,0	1/1:1,50:50:99:1900,138,0	1/1:0,21:21:54.18:755,54,0	1/1:0,18:18:54.18:751,54,0	1/1:0,45:45:99:1737,126,0	0/0:25,0:25:75.24:0,75,1171	0/0:23,0:23:66.23:0,66,1051	0/0:27,0:25:75.24:0,75,1161	0/0:10,0:10:30.10:0,30,478
chr10	16870238	.	AACCATGC	A	26097.12	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-2.419;DP=757;FS=9.906;HRun=0;HaplotypeScore=250.9432;InbreedingCoeff=0.9990;MQ=83.24;MQ0=0;MQRankSum=-19.843;QD=53.37;ReadPosRankSum=2.069;VQSLOD=3.0873;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,34:44:64.13:1942,64,0	0/0:14,0:14:42.14:0,42,1675	0/0:29,0:29:78.24:0,78,2756	0/0:32,0:32:93.32:0,93,3345	0/0:17,0:17:45.15:0,45,1799	1/1:1,28:29:75.12:1826,75,0	1/1:7,28:35:69.13:1672,69,0	1/1:5,14:19:42.13:1016,42,0	1/1:6,24:30:72.25:1855,72,0	0/0:27,0:27:78.27:0,78,3062	0/0:16,0:16:45.15:0,45,1783	1/1:5,38:43:99:2801,108,0	1/1:5,36:41:93.24:2411,93,0	1/1:4,27:31:72.25:1843,72,0	0/0:34,0:34:96.33:0,96,3771	1/1:2,31:33:84.29:2143,84,0	0/0:40,0:39:99:0,120,4683	1/1:1,15:16:36.07:875,36,0	1/1:5,16:21:48.12:1082,48,0	1/1:4,30:34:77.99:1674,78,0	1/1:5,21:26:33.03:696,33,0	1/1:3,29:32:72.16:1601,72,0	1/1:0,15:15:33.11:852,33,0	1/1:3,13:16:21.07:545,21,0	1/1:3,20:24:51.11:1263,51,0	0/0:27,0:27:78.27:0,78,3120	0/0:24,0:22:69.24:0,69,2744	0/0:8,0:8:24.08:0,24,960
chr10	16871110	.	G	GTA	14974.49	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-11.441;DP=763;FS=3.622;HRun=0;HaplotypeScore=94.1647;InbreedingCoeff=0.9954;MQ=78.46;MQ0=0;MQRankSum=-2.697;QD=47.09;ReadPosRankSum=4.788;VQSLOD=6.2153;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,52:54:99:2526,135,0	0/0:9,0:9:27.09:0,27,398	0/0:21,0:21:54.17:0,54,783	0/0:15,0:15:35.93:0,36,462	0/0:25,0:25:75.25:0,75,1104	1/1:1,13:15:36.12:674,36,0	1/1:1,26:27:66.23:1236,66,0	0/0:30,0:30:90.30:0,90,1320	1/1:1,24:26:60.21:1123,60,0	0/0:23,0:23:66.22:0,66,967	0/0:19,0:19:48.16:0,48,706	1/1:2,41:43:99:2190,117,0	1/1:2,24:26:63.22:1160,63,0	1/1:2,29:31:81.28:1517,81,0	0/0:36,0:36:99:0,102,1482	0/0:41,1:42:61.17:0,61,1601	0/0:34,0:34:99:0,99,1452	0/0:32,0:32:87.29:0,87,1277	0/0:21,0:21:63.21:0,63,917	0/0:25,0:25:69.22:0,69,994	0/0:59,0:59:99:0,175,2531	1/1:1,18:21:42.14:786,42,0	1/1:1,26:27:81.28:1514,81,0	1/1:2,27:28:72.25:1348,72,0	1/1:2,16:18:48.16:899,48,0	0/0:30,0:30:90.28:0,90,1304	0/0:20,0:20:60.20:0,60,884	0/0:4,0:4:12.04:0,12,177
chr10	16871640	.	CGT	C	7170.67	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=12.477;DP=704;FS=8.566;HRun=0;HaplotypeScore=168.0468;InbreedingCoeff=0.9607;MQ=63.22;MQ0=1;MQRankSum=-5.773;QD=14.43;ReadPosRankSum=0.564;VQSLOD=4.0323;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:30:35.54:240,36,0	0/0:6,0:6:9.02:0,9,120	0/0:20,0:17:23.02:0,23,208	0/0:20,0:15:14.93:0,15,156	0/0:17,0:17:33.06:0,33,473	1/1:23,0:23:44.58:306,45,0	1/1:30,0:30:47.13:336,47,0	1/1:8,19:27:50.95:537,51,0	1/1:23,0:23:44.58:306,45,0	0/0:26,0:26:42.11:0,42,631	0/0:8,0:8:24.08:0,24,388	1/1:48,0:48:88.74:595,89,0	1/1:27,0:27:47.36:318,47,0	1/1:45,0:45:67.91:458,68,0	0/0:29,1:30:3.23:0,3,798	1/1:3,18:21:30.10:382,30,0	0/0:27,1:28:27.96:0,28,812	1/1:5,19:24:48.15:610,48,0	1/1:3,13:16:38.85:389,39,0	1/1:1,10:10:15.05:191,15,0	1/1:12,68:80:99:1353,108,0	1/1:24,1:25:32.29:226,32,0	1/1:16,0:16:23.76:162,24,0	1/1:31,0:31:59.44:408,59,0	1/1:5,15:20:39.01:354,39,0	0/0:24,0:24:57.13:0,57,772	0/0:17,0:17:48.08:0,48,714	0/0:11,0:11:21.07:0,21,346
chr10	16871650	.	TGTGC	T	10571.79	PASS	AB=1.000;AC=24;AF=0.429;AN=56;BaseQRankSum=7.224;DP=685;FS=5.377;HRun=0;HaplotypeScore=195.0378;InbreedingCoeff=0.8417;MQ=56.22;MQ0=2;MQRankSum=-9.063;QD=30.29;ReadPosRankSum=3.669;VQSLOD=4.4538;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,28:29:36.12:707,36,0	0/0:5,0:5:9.02:0,9,190	0/0:14,0:10:23.33:0,23,191	0/0:16,0:11:15.82:0,16,158	0/0:19,0:19:33.06:0,33,736	1/1:2,21:23:45.15:891,45,0	1/1:3,28:31:47.84:935,48,0	0/1:26,0:26:99:111,0,254	1/1:5,20:25:44.99:890,45,0	0/0:17,0:17:42.14:0,42,1017	0/0:9,0:9:24.08:0,24,642	1/1:1,41:42:93.26:1782,93,0	1/1:0,23:23:47.95:902,48,0	1/1:3,39:42:69.24:1344,69,0	0/0:30,0:30:41.19:0,41,1353	0/0:22,0:22:36.73:0,37,209	0/0:32,0:32:69.34:0,69,1374	0/0:21,0:21:47.62:0,48,221	0/1:15,0:14:33.43:106,0,33	0/0:11,0:10:16.99:0,17,90	0/0:83,0:83:99:0,132,717	1/1:2,22:24:33.11:648,33,0	1/1:1,16:17:24.08:473,24,0	1/1:2,30:32:60.21:1186,60,0	1/1:19,1:20:39.13:596,39,0	0/0:26,0:26:59.27:0,59,1175	0/0:18,0:18:51.16:0,51,1221	0/0:11,0:11:23.97:0,24,582
chr10	16871660	.	CGCGT	C	4199.77	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=15.200;DP=683;FS=2.531;HRun=0;HaplotypeScore=247.1125;InbreedingCoeff=0.9154;MQ=53.01;MQ0=2;MQRankSum=-8.832;QD=12.61;ReadPosRankSum=5.638;VQSLOD=3.0633;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:37,0:37:3.95:203,0,4	0/0:5,0:5:6.02:0,6,161	0/0:12,0:7:13:0,13,140	0/0:13,0:6:8.06:0,8,108	0/0:16,0:16:24.08:0,24,668	1/1:24,0:24:42.84:281,43,0	1/1:31,0:31:47.85:403,48,0	0/0:26,0:26:55:0,55,1017	1/1:25,0:25:43.22:289,43,0	0/0:16,0:16:36.11:0,36,860	0/0:11,0:11:24.07:0,24,575	1/1:40,0:40:77.99:677,78,0	1/1:25,0:25:36.46:292,36,0	1/1:44,0:44:67.62:553,68,0	0/0:28,0:28:48.09:0,48,1108	0/0:20,0:20:41.91:0,42,618	0/0:27,0:27:51.43:0,51,1139	0/0:22,0:22:60.17:0,60,758	0/0:16,0:15:22.27:0,22,377	0/0:10,0:9:21.07:0,21,295	0/0:75,0:75:99:0,162,2387	1/1:26,0:26:32.24:287,32,0	1/1:17,0:17:23.73:196,24,0	1/1:43,0:43:57.72:401,58,0	1/1:4,17:21:39.13:618,39,0	0/0:25,0:25:52.41:0,52,1081	0/0:16,0:16:42.13:0,42,1090	0/0:12,0:12:27.05:0,27,600
chr10	16871692	.	CGTGTGTGTGTGTGTGT	C	13062.56	PASS	AB=0.638;AC=38;AF=0.679;AN=56;BaseQRankSum=10.752;DP=691;FS=9.162;HRun=0;HaplotypeScore=357.8647;InbreedingCoeff=0.7560;MQ=46.90;MQ0=14;MQRankSum=-9.323;QD=29.16;ReadPosRankSum=0.127;VQSLOD=2.3093;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:27,6:32:26.12:681,26,0	1/1:1,0:5:8.90:225,9,0	0/0:27,0:17:11.97:0,12,260	0/0:21,0:16:9.03:0,9,209	1/1:3,0:17:6.01:72,6,0	1/1:14,7:21:21.07:784,21,0	1/1:24,4:26:23.86:417,24,0	0/0:25,0:23:30.10:0,30,943	1/1:16,13:28:31.67:1592,32,0	0/1:9,0:16:15.57:101,0,16	1/1:4,0:12:3.48:36,3,0	1/1:25,9:35:56.80:1486,57,0	1/1:11,5:17:29.98:825,30,0	1/1:25,13:39:54.04:1602,54,0	1/1:3,0:18:16.53:525,17,0	0/0:23,0:24:36.12:0,36,2096	0/1:9,0:25:8.63:498,0,9	0/0:24,0:24:42.09:0,42,1701	0/0:28,0:27:21.07:0,21,1234	0/0:11,0:10:15.05:0,15,745	0/0:83,0:83:99:0,132,6147	1/1:11,10:21:33.01:817,33,0	1/1:8,7:15:26.32:780,26,0	1/1:33,12:45:15.50:214,16,0	1/1:12,10:22:33.07:1213,33,0	1/1:8,0:21:17.30:555,17,0	1/1:9,0:15:6.02:195,6,0	1/1:4,0:10:12.04:445,12,0
chr10	16875090	.	GAGAGAAGAGA	G	7395.43	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=7.659;DP=572;FS=1.044;HRun=0;HaplotypeScore=181.0688;InbreedingCoeff=0.8668;MQ=69.01;MQ0=11;MQRankSum=-9.996;QD=48.02;ReadPosRankSum=1.069;VQSLOD=4.5669;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:45.15:0,45,1960	1/1:1,5:6:9.03:267,9,0	0/0:57,0:30:2.68:0,3,11	0/0:67,0:29:0.70:0,1,1	1/1:5,11:16:24.03:625,24,0	0/0:16,0:16:39.13:0,39,1530	0/0:25,0:25:42.14:0,42,1714	0/0:29,0:26:15.05:0,15,320	0/0:6,0:20:39.09:0,39,397	1/1:8,14:22:42.08:1032,42,0	1/1:3,10:13:20.76:473,21,0	0/0:15,0:15:36.11:0,36,1414	0/0:12,0:12:30.10:0,30,1465	0/0:24,0:24:45.15:0,45,2095	1/1:6,18:24:51.18:1512,51,0	0/0:22,0:22:42.14:0,42,1781	1/1:3,5:8:3.01:89,3,0	0/0:7,0:8:12.04:0,12,163	0/0:9,0:9:6.02:0,6,298	0/0:26,0:26:39.13:0,39,1831	0/0:14,0:14:39.13:0,39,1910	0/0:4,0:24:60.21:0,60,2448	0/0:13,0:13:30.99:0,31,1463	0/0:15,0:15:39.13:0,39,1838	1/1:6,13:19:30.10:889,30,0	1/1:3,12:15:36.10:908,36,0	1/1:5,22:27:50.97:1512,51,0	1/1:2,2:4:3.01:89,3,0
chr10	16875155	.	CATCTGTTGAAG	C	2272.97	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.411;DP=634;FS=9.531;HRun=0;HaplotypeScore=230.4719;InbreedingCoeff=0.9841;MQ=73.41;MQ0=1;MQRankSum=-7.216;QD=68.88;ReadPosRankSum=3.130;VQSLOD=2.1639;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,105,5821	0/0:7,0:7:18.06:0,18,1003	0/0:22,0:21:60.18:0,60,2536	0/0:17,0:14:39.13:0,39,1701	0/0:13,0:13:33.11:0,33,1793	0/0:13,0:13:39.12:0,39,2032	0/0:38,0:38:99:0,114,6231	0/0:41,0:41:99:0,123,6539	0/0:23,0:22:60.21:0,60,3152	0/0:27,0:27:78.74:0,79,4095	0/0:12,0:12:24.08:0,24,1261	0/0:22,0:22:63.22:0,63,3508	0/0:23,0:23:66.23:0,66,3658	0/0:31,0:31:90.31:0,90,4406	0/0:34,0:34:87.30:0,87,4693	1/1:4,20:24:51.18:1848,51,0	0/0:24,0:23:57.20:0,57,3233	1/1:2,7:9:15.05:544,15,0	0/0:17,0:17:51.18:0,51,2536	0/0:16,0:16:48.16:0,48,2628	0/0:36,0:36:99:0,105,5733	0/0:23,0:23:66.19:0,66,2939	0/0:10,0:10:30.10:0,30,1707	0/0:32,0:32:93.28:0,93,5147	0/0:16,0:16:42.14:0,42,1890	0/0:30,0:30:81.23:0,81,4129	0/0:30,0:30:78.22:0,78,4071	0/0:8,0:8:21.07:0,21,1184
chr10	16877690	.	C	CT	1525.41	PASS	AB=0.841;AC=12;AF=0.214;AN=56;BaseQRankSum=-5.373;DP=429;FS=8.277;HRun=10;HaplotypeScore=64.0428;InbreedingCoeff=0.6343;MQ=71.10;MQ0=2;MQRankSum=-4.340;QD=12.30;ReadPosRankSum=-1.135;VQSLOD=2.5356;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:26:68.83:0,69,559	0/0:12,0:12:32.93:0,33,266	0/0:13,0:13:17:0,17,128	0/1:11,0:10:0.10:0,0,126	0/0:28,0:28:65.90:0,66,542	0/0:21,0:22:61.87:0,62,490	0/1:15,1:16:5.08:5,0,167	0/1:19,18:33:7.74:517,0,8	0/0:10,0:11:20:0,20,154	0/0:19,0:19:49.96:0,50,399	0/0:15,0:15:41.95:0,42,345	0/0:9,0:9:20.97:0,21,172	0/0:7,0:7:14.97:0,15,123	0/0:11,0:11:26.81:0,27,204	0/0:11,0:11:23.97:0,24,197	1/1:1,10:10:18.05:192,18,0	0/0:25,0:26:49.94:0,50,400	1/1:3,4:6:12.03:128,12,0	1/1:6,9:14:34.83:327,35,0	1/1:5,16:20:45.10:467,45,0	0/1:4,2:6:15.62:55,0,16	0/0:6,0:6:11.97:0,12,99	0/0:10,0:10:26.94:0,27,218	0/0:8,0:8:14.93:0,15,117	0/0:14,0:14:20.55:0,21,158	0/0:21,0:21:47.91:0,48,394	0/0:15,0:15:26.86:0,27,222	0/0:19,0:19:53.94:0,54,443
chr10	16877721	.	AT	A	7151.52	PASS	AB=0.610;AC=27;AF=0.500;AN=54;BaseQRankSum=2.599;DP=436;FS=2.710;HRun=1;HaplotypeScore=52.9028;InbreedingCoeff=0.8814;MQ=42.36;MQ0=43;MQRankSum=0.687;QD=28.61;ReadPosRankSum=0.071;VQSLOD=4.5265;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:22:63.21:0,63,994	1/1:0,8:8:21.07:291,21,0	./.	0/0:9,0:2:5.97:0,6,57	1/1:0,23:23:57.19:797,57,0	0/0:23,0:23:66.22:0,66,1043	0/0:20,0:18:45.15:0,45,708	0/1:9,16:9:23.85:256,0,24	0/0:9,0:9:21.07:0,21,324	1/1:2,19:20:57.18:778,57,0	1/1:0,12:12:30.10:419,30,0	0/0:8,0:8:18.06:0,18,276	0/0:16,0:16:39.13:0,39,620	0/0:12,0:12:24.08:0,24,382	1/1:0,18:18:36.12:503,36,0	0/0:13,0:11:24.08:0,24,382	1/1:3,29:30:72.19:982,72,0	0/0:10,0:8:15.05:0,15,239	1/1:4,13:13:24.02:292,24,0	1/1:2,14:15:42.03:506,42,0	1/1:3,3:3:5.98:62,6,0	0/0:7,0:7:18.06:0,18,284	0/0:19,0:19:45.15:0,45,704	0/0:10,0:4:9.03:0,9,143	1/1:0,23:22:45.15:626,45,0	1/1:0,16:16:48.13:637,48,0	1/1:1,17:17:33.11:459,33,0	1/1:2,13:14:39.13:545,39,0
chr10	16879782	.	AT	A	6933.02	PASS	AB=0.941;AC=21;AF=0.375;AN=56;BaseQRankSum=12.126;DP=479;FS=15.407;HRun=1;HaplotypeScore=50.3805;InbreedingCoeff=0.9028;MQ=66.43;MQ0=7;MQRankSum=0.500;QD=32.86;ReadPosRankSum=5.529;VQSLOD=2.9775;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:81.10:0,81,1059	1/1:0,7:7:15.01:187,15,0	0/1:15,0:5:35.66:36,0,83	0/0:15,0:10:20.76:0,21,228	1/1:0,25:25:69.23:950,69,0	0/0:23,0:23:57.13:0,57,771	0/0:5,0:5:15.04:0,15,200	0/0:30,0:30:90.27:0,90,1259	0/0:17,0:17:48.13:0,48,660	1/1:0,22:22:66.22:920,66,0	1/1:0,23:23:66.18:893,66,0	0/0:10,0:10:21.06:0,21,288	0/0:16,0:16:45.13:0,45,633	0/0:15,0:15:45.12:0,45,616	1/1:0,9:9:18.06:251,18,0	0/0:16,0:16:48.16:0,48,700	1/1:0,25:25:57.19:795,57,0	0/0:36,0:36:99:0,108,1525	0/0:19,0:19:57.18:0,57,801	0/0:14,0:14:42.13:0,42,584	0/0:4,0:4:12.04:0,12,175	0/0:3,0:3:8.96:0,9,105	0/0:12,0:12:36.11:0,36,506	0/0:6,0:6:18.04:0,18,243	1/1:0,23:22:54.18:754,54,0	1/1:0,23:23:69.17:893,69,0	1/1:0,20:20:36.12:502,36,0	1/1:0,18:18:54.18:753,54,0
chr10	16883964	.	AACAGCACGGCTCCTTAG	A	20673.71	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=17.438;DP=700;FS=4.794;HRun=0;HaplotypeScore=324.0370;InbreedingCoeff=0.9885;MQ=84.37;MQ0=0;MQRankSum=-17.679;QD=74.63;ReadPosRankSum=6.266;VQSLOD=3.7869;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,21:30:39.13:1752,39,0	0/0:3,0:3:9.03:0,9,562	0/0:26,0:26:69.24:0,69,4140	0/0:26,0:26:69.23:0,69,4551	0/0:21,0:21:57.20:0,57,3887	1/1:6,19:25:42.14:1898,42,0	1/1:9,15:24:27.09:1303,27,0	0/0:39,0:39:99:0,99,7161	1/1:8,17:25:30.57:1448,31,0	0/0:26,0:26:69.24:0,69,4877	0/0:11,0:11:27.09:0,27,1654	1/1:12,19:31:57.20:2750,57,0	1/1:8,31:39:78.03:3757,78,0	1/1:6,22:28:47.91:2316,48,0	0/0:25,0:25:69.24:0,69,5156	0/0:29,0:29:78.27:0,78,5779	0/0:28,0:28:81.28:0,81,6120	0/0:32,0:32:84.29:0,84,6539	0/0:23,0:23:63.22:0,63,3717	0/0:17,0:17:45.11:0,45,2989	0/0:43,0:43:99:0,120,9511	1/1:5,23:28:54.19:2605,54,0	1/1:1,14:15:27.09:1303,27,0	1/1:8,24:32:38.81:1542,39,0	0/0:13,0:13:39.13:0,39,3166	0/0:29,0:29:75.26:0,75,5117	0/0:26,0:26:75.22:0,75,5490	0/0:6,0:6:15.05:0,15,1234
chr10	16884469	.	TACACACACACACAC	T	1998.72	PASS	AB=0.839;AC=18;AF=0.360;AN=50;BaseQRankSum=2.344;DP=624;FS=0.731;HRun=0;HaplotypeScore=207.7315;InbreedingCoeff=0.4121;MQ=60.26;MQ0=14;MQRankSum=-1.692;QD=8.58;ReadPosRankSum=0.966;VQSLOD=2.6713;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:60.74:0,61,1872	1/1:5,7:12:6.49:235,6,0	./.	./.	0/1:11,5:16:0.95:130,0,1	0/0:21,0:22:27.09:0,27,1003	0/0:31,0:31:13.76:0,14,340	0/1:23,0:19:3.04:3,0,56	0/0:16,0:16:7.74:0,8,276	1/1:15,0:13:3.01:71,3,0	0/0:6,3:9:0:0,0,0	0/0:22,0:23:26.08:0,26,996	0/0:20,0:20:9.03:0,9,237	0/0:27,0:27:19.02:0,19,605	1/1:12,10:23:9.02:232,9,0	0/0:30,0:31:50.34:0,50,2516	./.	0/0:23,0:23:45.55:0,46,1819	0/1:11,2:13:3.86:68,0,4	0/1:14,0:21:16.77:17,0,55	0/1:37,0:37:15.97:32,0,16	0/0:19,0:19:5.05:0,5,184	0/0:11,0:11:8.05:0,8,223	0/0:36,0:37:48.13:0,48,2133	0/1:9,9:18:11.94:127,0,12	1/1:10,13:23:12.70:676,13,0	1/1:5,13:18:2.69:100,3,0	1/1:3,10:12:12.04:468,12,0
chr10	16884509	.	C	CACAG	3022.73	PASS	AB=0.760;AC=18;AF=0.321;AN=56;BaseQRankSum=-2.124;DP=669;FS=5.169;HRun=0;HaplotypeScore=143.5163;InbreedingCoeff=0.3686;MQ=61.06;MQ0=16;MQRankSum=2.094;QD=9.02;ReadPosRankSum=3.242;VQSLOD=2.8299;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:43,4:45:18.32:658,0,18	0/0:13,0:13:23.95:0,24,200	0/0:36,0:21:36.93:0,37,516	0/0:41,0:20:12.75:0,13,382	0/0:16,0:16:29.56:0,30,218	1/1:9,1:26:22.29:312,22,0	1/1:2,18:25:7.78:185,8,0	0/0:33,0:32:86.84:0,87,735	0/1:4,16:23:8.80:75,0,9	0/0:20,0:18:50.98:0,51,469	0/0:8,0:7:8.79:0,9,58	0/1:3,19:27:5.35:244,0,5	1/1:3,0:13:7.71:106,8,0	0/1:4,19:28:3.38:240,0,3	0/0:23,0:23:35.39:0,35,280	0/1:37,0:36:99:328,0,238	0/0:21,0:21:17.97:0,18,148	0/1:25,0:24:99:111,0,238	0/0:13,0:13:32.91:0,33,275	0/1:12,0:12:3.10:3,0,80	0/0:28,0:26:41.92:0,42,343	1/1:3,11:20:2.64:80,3,0	1/1:1,12:15:2.48:79,2,0	0/1:6,27:36:0.22:772,0,0	0/0:18,0:17:23.98:0,24,207	0/0:23,0:22:47.25:0,47,386	0/0:23,0:23:26.12:0,26,210	0/0:18,0:17:29.99:0,30,276
chr10	16885089	.	G	GA	3605.06	PASS	AB=0.824;AC=22;AF=0.393;AN=56;BaseQRankSum=-5.892;DP=619;FS=12.092;HRun=12;HaplotypeScore=69.0914;InbreedingCoeff=0.7203;MQ=65.26;MQ0=0;MQRankSum=1.209;QD=12.69;ReadPosRankSum=-2.230;VQSLOD=1.7065;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:33:46.09:0,46,447	1/1:3,7:10:15.02:146,15,0	0/0:15,0:11:6.83:0,7,45	0/0:10,0:10:5.72:0,6,22	1/1:9,25:37:64.57:563,65,0	0/0:27,0:28:52.64:0,53,378	0/0:20,0:22:43.74:0,44,310	0/0:29,2:30:39.42:0,39,451	0/0:19,3:22:15.52:0,16,277	1/1:10,9:19:9.38:244,9,0	1/1:3,16:20:29.08:421,29,0	0/0:24,0:25:58.62:0,59,421	0/1:14,2:17:0.31:0,0,152	0/0:20,1:22:30.28:0,30,314	1/1:8,14:23:35.89:335,36,0	0/0:22,1:24:20.50:0,20,302	1/1:6,19:25:48.08:467,48,0	0/0:26,1:29:18.96:0,19,390	0/1:17,2:19:28.30:28,0,196	0/0:20,0:20:41.72:0,42,306	0/0:16,0:16:29.77:0,30,217	0/0:16,0:16:25.92:0,26,195	0/0:22,0:22:44.68:0,45,328	0/1:21,2:23:7.66:8,0,278	0/1:4,11:15:5.63:104,0,6	1/1:3,25:28:60.94:568,61,0	1/1:5,21:27:26:401,26,0	1/1:2,17:21:35.73:320,36,0
chr10	16885200	.	AG	A	8815.60	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=12.107;DP=663;FS=7.540;HRun=1;HaplotypeScore=64.0852;InbreedingCoeff=0.9994;MQ=81.29;MQ0=0;MQRankSum=2.229;QD=36.43;ReadPosRankSum=3.178;VQSLOD=5.1637;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,33:34:76.83:1281,77,0	0/0:7,0:7:21.07:0,21,335	0/0:22,0:22:47.17:0,47,802	0/0:16,0:15:42.14:0,42,625	0/0:30,0:30:90.24:0,90,1402	1/1:0,32:32:81.27:1132,81,0	1/1:0,25:25:54.18:755,54,0	0/0:36,0:36:99:0,105,1594	1/1:0,23:23:69.23:964,69,0	0/0:23,0:23:69.23:0,69,1090	0/0:26,0:26:78.23:0,78,1194	1/1:0,21:21:60.20:839,60,0	1/1:0,20:20:60.20:837,60,0	1/1:0,22:22:57.19:797,57,0	0/0:24,0:24:72.21:0,72,1095	0/0:29,0:29:87.28:0,87,1361	0/0:26,0:26:78.27:0,78,1240	0/0:22,0:22:66.20:0,66,1008	0/0:20,0:20:60.19:0,60,935	0/0:19,0:19:54.10:0,54,760	0/0:16,0:16:48.16:0,48,756	1/1:0,25:25:63.21:869,63,0	1/1:0,21:21:51.17:713,51,0	1/1:0,19:19:45.15:629,45,0	0/0:28,0:27:81.28:0,81,1283	0/0:25,0:25:75.26:0,75,1192	0/0:23,0:22:69.17:0,69,1035	0/0:29,0:29:87.30:0,87,1377
chr10	16885518	.	C	CTT	2586.21	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=8.777;DP=609;FS=17.125;HRun=1;HaplotypeScore=115.9242;InbreedingCoeff=0.9104;MQ=60.86;MQ0=12;MQRankSum=2.906;QD=13.19;ReadPosRankSum=4.128;VQSLOD=-0.6630;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:31,0:31:55.63:590,56,0	0/0:7,0:7:13.11:0,13,99	0/0:24,0:13:37.64:0,38,321	0/0:29,0:13:22.39:0,22,324	0/0:26,0:25:32.90:0,33,261	1/1:2,14:16:1.82:5,2,0	1/1:18,0:14:36.02:408,36,0	0/0:24,0:24:58.79:0,59,473	1/1:22,0:21:38.19:361,38,0	0/0:21,0:19:43.77:0,44,341	0/0:20,0:18:29.48:0,29,237	1/1:25,0:25:51:521,51,0	1/1:19,0:19:45.02:467,45,0	1/1:4,12:17:4.95:57,5,0	0/0:27,0:26:35.95:0,36,297	0/0:36,0:35:34.90:0,35,308	0/0:26,0:23:36.25:0,36,275	0/0:16,0:15:30.11:0,30,210	0/0:26,0:26:73.51:0,74,609	0/0:15,0:13:20.96:0,21,171	0/0:29,0:26:38.98:0,39,337	1/1:13,0:13:20.32:202,20,0	1/1:11,0:11:16.11:122,16,0	1/1:0,24:24:3.01:58,3,0	0/0:14,0:13:8.63:0,9,103	0/0:21,0:21:47.88:0,48,339	0/0:19,0:16:29.75:0,30,228	0/0:32,0:30:47.43:0,47,348
chr10	16886119	.	TACATACACAC	T	1486.59	PASS	AB=0.960;AC=18;AF=0.321;AN=56;BaseQRankSum=9.668;DP=610;FS=13.189;HRun=0;HaplotypeScore=188.4215;InbreedingCoeff=-0.0855;MQ=62.86;MQ0=11;MQRankSum=-8.653;QD=4.66;ReadPosRankSum=5.830;VQSLOD=1.3838;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:39,0:39:77.90:78,0,117	1/1:7,0:7:3.01:54,3,0	0/0:34,0:25:60.39:0,60,751	0/0:33,0:25:68.94:0,69,718	0/0:26,0:26:14.93:0,15,123	0/0:14,0:14:5.57:0,6,50	0/1:21,0:20:99:202,0,136	0/0:24,0:24:60.01:0,60,1104	0/1:22,0:22:44.25:44,0,62	0/1:28,0:28:99:177,0,438	0/0:10,0:10:8.98:0,9,72	0/1:29,0:29:44.21:44,0,81	0/1:18,0:17:99:147,0,100	0/0:27,0:26:26.96:0,27,223	0/0:34,0:33:20.98:0,21,175	1/1:2,12:15:8.65:251,9,0	0/1:15,0:15:40.78:41,0,61	0/1:2,11:12:11.99:32,0,12	0/0:7,0:7:19.59:0,20,528	0/0:14,0:14:36.06:0,36,1301	0/0:31,0:31:67.61:0,68,1611	0/1:29,0:29:27.91:28,0,148	0/0:24,0:24:2.97:0,3,20	0/1:23,0:23:40.99:41,0,59	0/0:13,0:13:5.99:0,6,48	0/1:20,0:19:99:117,0,204	0/1:28,0:28:99:239,0,130	1/1:11,0:10:9.03:158,9,0
chr10	16886123	.	TACACACACACACACACACAC	T	4531.59	PASS	AB=0.798;AC=23;AF=0.479;AN=48;BaseQRankSum=7.959;DP=610;FS=0.764;HRun=0;HaplotypeScore=237.4379;InbreedingCoeff=0.3520;MQ=57.40;MQ0=14;MQRankSum=-4.708;QD=14.30;ReadPosRankSum=3.528;VQSLOD=3.5037;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:17,0:36:91.83:117,0,92	1/1:0,8:8:3.01:160,3,0	0/0:30,0:21:21.07:0,21,848	0/0:31,0:23:30.08:0,30,977	1/1:23,0:24:1.25:3,1,0	0/0:4,0:13:5.81:0,6,49	0/1:12,0:21:34.89:361,0,35	0/0:23,0:23:36.12:0,36,2176	0/1:22,0:23:13.09:130,0,13	1/1:19,10:29:17.35:827,17,0	./.	1/1:27,0:30:3.01:117,3,0	0/1:11,0:16:56:256,0,56	0/0:13,0:27:3.01:0,3,46	./.	0/0:13,0:13:7.05:0,7,45	1/1:14,1:15:3.01:140,3,0	0/0:14,0:12:6.02:0,6,217	0/0:10,0:10:27.08:0,27,1477	0/0:17,0:17:33.09:0,33,2264	0/0:29,0:29:40.46:0,40,2627	0/1:27,0:28:38.91:160,0,39	./.	1/1:24,0:24:2.71:136,3,0	./.	1/1:10,10:19:16.82:617,17,0	1/1:9,19:28:21.07:1028,21,0	1/1:1,10:10:9.03:480,9,0
chr10	16886137	.	CACACACACACACACACACACACAG	C	3761.34	PASS	AB=0.950;AC=17;AF=0.327;AN=52;BaseQRankSum=9.222;DP=595;FS=3.119;HRun=0;HaplotypeScore=253.5377;InbreedingCoeff=0.0254;MQ=43.37;MQ0=24;MQRankSum=-5.516;QD=13.06;ReadPosRankSum=5.268;VQSLOD=2.2899;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:38,0:37:80.08:80,0,180	1/1:9,0:9:1.09:140,1,0	0/0:19,0:11:24.08:0,24,1062	0/0:22,0:14:42.05:0,42,1364	0/0:23,0:23:1.13:0,1,21	0/0:15,0:15:5.80:0,6,98	0/1:20,0:16:59.87:290,0,60	0/0:20,0:20:57.20:0,57,3035	0/1:26,0:26:46.97:85,0,47	0/1:20,0:18:61.16:699,0,61	0/0:10,0:9:3:0,3,25	1/1:34,0:33:2.34:100,2,0	0/1:21,0:19:99:216,0,195	0/0:26,0:24:6.47:0,6,96	0/0:29,0:28:3:0,3,25	0/0:21,0:21:22.12:0,22,524	0/1:3,14:17:1.85:233,0,2	0/0:20,0:16:27.09:0,27,1011	0/0:15,0:14:42.14:0,42,2205	0/0:17,0:17:33.09:0,33,2570	0/0:33,0:33:52.38:0,52,3341	0/1:26,0:26:60.37:134,0,60	./.	1/1:23,0:23:2.48:78,2,0	./.	0/1:19,0:17:99:433,0,267	0/1:24,0:24:16.58:851,0,17	1/1:11,0:10:9.03:424,9,0
chr10	16886139	.	CACACACACACACACACACACAGAG	C	4560.35	PASS	AB=1.000;AC=23;AF=0.479;AN=48;BaseQRankSum=9.021;DP=602;FS=2.136;HRun=0;HaplotypeScore=250.4582;InbreedingCoeff=0.2078;MQ=42.80;MQ0=24;MQRankSum=-5.133;QD=13.22;ReadPosRankSum=4.922;VQSLOD=3.6672;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:40,0:39:93.30:117,0,93	1/1:9,0:9:1.49:157,1,0	0/0:18,0:10:21.07:0,21,848	0/0:20,0:12:30.08:0,30,977	1/1:5,18:24:1.25:3,1,0	0/0:16,0:16:1.38:0,1,42	0/1:19,0:15:34.89:361,0,35	0/0:22,0:22:63.11:0,63,2657	0/1:27,0:27:21.13:123,0,21	1/1:19,0:17:17.16:827,17,0	./.	1/1:34,0:33:2.34:118,2,0	0/1:21,0:19:89.67:308,0,90	0/1:28,0:26:25.02:25,0,37	./.	0/0:22,0:22:23.19:0,23,606	1/1:17,0:17:5.28:225,5,0	0/0:20,0:16:27.09:0,27,983	0/0:15,0:14:42.13:0,42,1884	0/0:17,0:17:33.08:0,33,2309	0/0:34,0:34:46.47:0,46,2883	0/1:29,0:29:36.32:185,0,36	./.	1/1:23,0:23:2.48:96,2,0	./.	0/1:20,0:18:99:542,0,313	1/1:24,0:24:9.52:993,10,0	1/1:11,0:10:9.03:480,9,0
chr10	16886143	.	CACACACACACACACACAGAG	C	4785.99	PASS	AB=1.000;AC=28;AF=0.583;AN=48;BaseQRankSum=9.376;DP=577;FS=7.524;HRun=0;HaplotypeScore=212.1912;InbreedingCoeff=0.4838;MQ=41.88;MQ0=27;MQRankSum=-3.310;QD=13.64;ReadPosRankSum=4.368;VQSLOD=2.8566;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:40,0:38:10.82:296,11,0	1/1:10,0:10:1.68:121,2,0	0/0:11,0:7:15:0,15,472	0/0:13,0:6:15.05:0,15,496	0/0:23,0:23:1.61:0,2,16	1/1:14,0:14:6.02:86,6,0	1/1:20,0:15:12.04:517,12,0	0/0:25,0:25:57.04:0,57,1882	1/1:6,21:27:9.03:245,9,0	1/1:15,0:13:13.80:598,14,0	./.	1/1:13,0:33:2.74:151,3,0	1/1:21,0:19:18.78:593,19,0	0/1:27,0:25:27.82:62,0,28	./.	0/1:23,0:23:29.41:29,0,556	0/1:19,0:19:5.50:151,0,5	0/0:21,0:17:30.03:0,30,704	0/0:17,0:15:39.11:0,39,1270	0/0:16,0:16:27.09:0,27,1765	0/0:32,0:31:42.09:0,42,2053	1/1:8,1:28:8.74:292,9,0	./.	1/1:5,18:23:2.45:170,2,0	./.	0/1:19,0:17:99:354,0,275	1/1:20,0:20:16.72:757,17,0	1/1:11,0:10:9.03:365,9,0
chr10	16887464	.	AC	A	16623.42	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-5.150;DP=739;FS=8.785;HRun=8;HaplotypeScore=87.2414;InbreedingCoeff=0.9945;MQ=78.15;MQ0=0;MQRankSum=-8.219;QD=23.82;ReadPosRankSum=6.233;VQSLOD=4.6537;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:10,26:36:66.10:637,66,0	1/1:1,10:11:27.04:261,27,0	0/0:24,0:24:69.18:0,69,782	0/0:17,0:16:44.94:0,45,471	1/1:4,11:15:35.75:321,36,0	1/1:1,16:17:36.06:348,36,0	1/1:6,22:28:66.10:637,66,0	1/1:4,20:24:60.09:579,60,0	1/1:1,24:25:69.11:666,69,0	1/1:2,24:26:75.03:710,75,0	1/1:2,6:8:18.03:174,18,0	1/1:7,35:42:99:956,99,0	1/1:1,44:45:99:1216,126,0	1/1:2,30:32:90.14:869,90,0	1/1:5,47:52:99:1188,123,0	1/1:1,31:32:84.14:811,84,0	1/1:1,26:27:78.13:753,78,0	1/1:4,26:30:72.11:695,72,0	1/1:2,18:20:54.06:515,54,0	1/1:1,12:13:29.97:272,30,0	1/1:7,62:69:99:1592,165,0	1/1:0,15:15:39.06:377,39,0	1/1:4,10:14:30.04:289,30,0	1/1:6,23:29:63.10:608,63,0	1/1:2,17:19:45.07:435,45,0	1/1:2,20:22:60.05:567,60,0	1/1:1,32:33:87.06:828,87,0	1/1:1,13:14:33.05:319,33,0
chr10	16889226	.	T	TG	6185.45	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-12.179;DP=507;FS=0.761;HRun=5;HaplotypeScore=49.6117;InbreedingCoeff=0.9928;MQ=84.77;MQ0=1;MQRankSum=-0.913;QD=30.77;ReadPosRankSum=1.811;VQSLOD=5.2445;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,35:37:90.29:1180,90,0	0/0:6,0:6:18.04:0,18,190	0/0:21,0:20:24.78:0,25,508	0/0:17,0:17:38.22:0,38,365	0/0:15,0:15:42.11:0,42,451	1/1:4,12:16:24.08:316,24,0	1/1:2,28:30:72.23:947,72,0	0/0:13,0:13:30.07:0,30,322	1/1:3,8:11:24.08:315,24,0	0/0:25,0:25:66.16:0,66,709	0/0:9,0:9:27.07:0,27,290	1/1:3,26:29:78.25:1024,78,0	1/1:2,8:10:21.07:276,21,0	1/1:0,13:13:33.11:434,33,0	0/0:11,0:11:30.07:0,30,322	0/0:14,0:14:39.10:0,39,419	0/0:20,0:20:60.15:0,60,644	0/0:25,0:24:60.12:0,60,633	0/0:13,0:13:36.09:0,36,387	0/0:9,0:9:21.05:0,21,226	0/0:44,0:44:99:0,123,1320	1/1:1,17:18:39.60:508,40,0	1/1:0,6:6:15.05:197,15,0	1/1:2,29:31:75.24:987,75,0	0/0:17,0:17:51.13:0,51,548	0/0:28,0:28:75.18:0,75,796	0/0:13,0:13:39.10:0,39,419	0/0:6,0:6:18.05:0,18,193
chr10	16891520	.	C	CTT	8442.17	PASS	AB=0.703;AC=49;AF=0.875;AN=56;BaseQRankSum=-2.070;DP=571;FS=0.000;HRun=13;HaplotypeScore=94.1568;InbreedingCoeff=0.0853;MQ=74.47;MQ0=6;MQRankSum=-3.734;QD=15.78;ReadPosRankSum=2.096;VQSLOD=4.1029;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,24:34:43.60:502,44,0	1/1:2,3:7:11.52:119,12,0	0/0:35,0:18:1.11:0,1,91	0/1:24,0:18:12.76:13,0,68	1/1:9,14:26:37.31:413,37,0	1/1:9,10:21:27.04:333,27,0	1/1:8,9:19:38.34:421,38,0	1/1:21,13:37:28.02:554,28,0	1/1:5,10:15:29.54:355,30,0	1/1:9,9:19:6.60:308,7,0	1/1:9,11:23:22.28:496,22,0	1/1:6,3:10:26.16:293,26,0	1/1:4,8:12:21.02:264,21,0	1/1:5,9:14:17.63:195,18,0	1/1:3,12:16:24.04:301,24,0	0/1:7,0:15:24.76:25,0,34	1/1:8,11:24:42.52:426,43,0	0/1:10,1:28:21.79:103,0,22	0/1:13,10:27:3.70:415,0,4	1/1:2,12:18:37.29:342,37,0	1/1:7,3:12:15.39:160,15,0	1/1:5,11:17:36.03:435,36,0	1/1:5,15:21:15.06:406,15,0	1/1:4,11:15:24.08:326,24,0	1/1:5,14:21:28.28:305,28,0	1/1:9,19:29:45.33:517,45,0	1/1:7,8:18:20.14:223,20,0	0/1:3,5:9:5.88:192,0,6
chr10	16891926	.	CACA	C	6612.81	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=11.981;DP=510;FS=2.109;HRun=0;HaplotypeScore=84.6485;InbreedingCoeff=0.9458;MQ=88.19;MQ0=1;MQRankSum=-5.365;QD=28.38;ReadPosRankSum=-1.823;VQSLOD=4.4288;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,126,2808	1/1:2,0:4:11.86:99,12,0	0/0:22,0:22:63.21:0,63,1321	0/0:20,0:19:48.16:0,48,984	1/1:5,0:8:12.96:129,13,0	0/0:22,0:22:63.21:0,63,1320	0/0:22,0:22:63.20:0,63,1301	1/1:0,17:17:48.11:738,48,0	0/0:18,0:18:54.19:0,54,1220	1/1:2,5:8:5.67:109,6,0	1/1:0,4:5:6.02:72,6,0	0/0:26,0:26:75.25:0,75,1617	0/0:19,0:19:57.19:0,57,1256	0/0:24,0:24:72.22:0,72,1403	1/1:12,0:22:63.55:708,64,0	1/1:1,19:21:32.63:552,33,0	1/1:0,12:29:54.06:596,54,0	1/1:0,18:18:39.13:711,39,0	1/1:0,16:16:45.10:719,45,0	1/1:0,9:9:24.08:344,24,0	1/1:1,34:35:51.11:876,51,0	0/0:17,0:17:45.14:0,45,938	0/0:12,0:12:29.41:0,29,525	0/0:29,0:29:87.28:0,87,1885	1/1:9,1:10:6.02:74,6,0	1/1:8,0:12:24.06:287,24,0	1/1:4,0:12:35.98:387,36,0	1/1:4,0:6:18.05:212,18,0
chr10	16891928	.	CA	C	2789.69	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=15.284;DP=517;FS=1.656;HRun=1;HaplotypeScore=82.4144;InbreedingCoeff=0.9326;MQ=90.51;MQ0=1;MQRankSum=-5.669;QD=11.87;ReadPosRankSum=-1.788;VQSLOD=1.3938;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,127,1689	1/1:4,1:5:8.97:72,9,0	0/0:25,0:25:65.96:0,66,820	0/0:21,0:20:50.94:0,51,613	1/1:6,3:9:13.29:93,13,0	0/0:23,0:23:57.68:0,58,756	0/0:21,0:21:60.13:0,60,756	1/1:17,0:17:41.25:290,41,0	0/0:18,0:18:54.17:0,54,741	1/1:7,1:8:2.94:37,3,0	1/1:5,0:5:5.96:45,6,0	0/0:28,0:28:75.10:0,75,970	0/0:20,0:20:60.05:0,60,769	0/0:23,0:23:66.07:0,66,796	1/1:18,4:22:59.78:480,60,0	1/1:20,1:21:30.92:163,31,0	1/1:19,10:29:52.38:390,52,0	1/1:18,0:18:36.54:176,37,0	1/1:16,0:16:40.35:269,40,0	1/1:9,0:9:23.31:165,23,0	1/1:35,1:35:45.13:228,45,0	0/0:16,0:16:42.12:0,42,537	0/0:13,0:13:23.45:0,23,295	0/0:28,0:28:84.19:0,84,1127	1/1:10,0:10:5.92:39,6,0	1/1:9,3:12:23.87:184,24,0	1/1:7,5:12:35.48:256,35,0	1/1:6,0:6:17.68:126,18,0
chr10	16892900	.	C	CTTT	9829.12	PASS	AB=0.750;AC=17;AF=0.304;AN=56;BaseQRankSum=19.574;DP=733;FS=15.014;HRun=1;HaplotypeScore=169.3714;InbreedingCoeff=0.9235;MQ=77.20;MQ0=1;MQRankSum=-19.428;QD=46.81;ReadPosRankSum=-0.781;VQSLOD=3.3532;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,126,2195	1/1:5,14:19:53.93:991,54,0	0/0:28,0:28:80.48:0,80,1334	0/0:20,0:20:57.17:0,57,970	1/1:5,21:26:61.82:789,62,0	0/0:27,0:27:81.26:0,81,1400	0/0:26,0:26:75.26:0,75,1324	0/0:24,0:24:63.19:0,63,1082	0/0:31,0:31:93.32:0,93,1637	1/1:8,18:26:72.24:1313,72,0	1/1:3,18:21:57.15:933,57,0	0/0:43,0:43:99:0,123,2170	0/0:19,0:19:57.20:0,57,1005	0/0:25,0:25:75.26:0,75,1320	1/1:10,24:34:99:1886,99,0	0/0:37,0:37:99:0,105,1820	1/1:5,12:17:48.14:837,48,0	0/0:28,0:28:75.26:0,75,1323	0/0:12,0:12:36.12:0,36,635	0/0:14,0:14:36.12:0,36,635	0/0:57,0:57:99:0,169,2868	0/0:21,0:21:57.19:0,57,993	0/0:20,0:20:57.19:0,57,1006	0/0:29,0:29:87.28:0,87,1497	0/0:19,0:19:54.16:0,54,897	1/1:14,30:44:58.43:1975,58,0	1/1:5,14:19:54.19:1053,54,0	0/1:2,1:3:9.91:52,0,10
chr10	16892901	.	TGGA	T	3680.47	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=18.598;DP=699;FS=17.107;HRun=0;HaplotypeScore=169.1324;InbreedingCoeff=0.9231;MQ=78.80;MQ0=1;MQRankSum=-16.652;QD=21.03;ReadPosRankSum=0.706;VQSLOD=2.2221;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,129,3176	1/1:15,0:15:41.39:277,41,0	0/0:26,0:28:84.15:0,84,1901	0/0:20,0:20:57.20:0,57,1389	1/1:21,3:24:35.39:616,35,0	0/0:27,0:27:81.26:0,81,1945	0/0:26,0:26:78.27:0,78,1899	0/0:24,0:24:66.23:0,66,1608	0/0:31,0:31:93.32:0,93,2270	1/1:18,2:20:38.13:409,38,0	1/1:19,0:19:53.49:486,53,0	0/0:42,0:42:99:0,126,3059	0/0:19,0:19:57.20:0,57,1402	0/0:25,0:25:75.26:0,75,1826	1/1:25,0:25:73.61:502,74,0	0/0:38,0:38:99:0,114,2703	1/1:16,1:16:35.06:361,35,0	0/0:28,0:28:84.29:0,84,1972	0/0:13,0:13:39.13:0,39,919	0/0:14,0:14:42.14:0,42,1023	0/0:57,0:57:99:0,172,4010	0/0:21,0:21:63.22:0,63,1549	0/0:20,0:20:60.21:0,60,1476	0/0:30,0:30:90.31:0,90,2193	0/0:18,0:18:54.19:0,54,1330	1/1:31,7:38:36.07:704,36,0	1/1:14,0:14:41.46:285,41,0	0/1:3,0:3:10.14:41,0,10
chr10	16892902	.	G	GC	2619.63	PASS	AB=0.750;AC=17;AF=0.304;AN=56;BaseQRankSum=18.782;DP=705;FS=14.674;HRun=0;HaplotypeScore=145.5506;InbreedingCoeff=0.9537;MQ=79.72;MQ0=1;MQRankSum=-17.824;QD=15.14;ReadPosRankSum=1.832;VQSLOD=5.0353;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,129,1803	1/1:0,14:14:38.51:260,39,0	0/0:29,0:29:52.93:0,53,1023	0/0:21,0:21:57.19:0,57,784	1/1:3,21:24:46.91:282,47,0	0/0:27,0:27:78.26:0,78,1091	0/0:26,0:26:78.25:0,78,1075	0/0:26,0:26:66.21:0,66,909	0/0:31,0:31:93.30:0,93,1284	1/1:2,18:20:51.45:347,51,0	1/1:1,18:19:49.81:296,50,0	0/0:42,0:42:99:0,126,1737	0/0:19,0:19:57.19:0,57,794	0/0:26,0:26:75.24:0,75,1034	1/1:1,24:25:70.63:456,71,0	0/0:38,0:38:99:0,111,1519	1/1:4,12:15:39.98:249,40,0	0/0:28,0:28:84.15:0,84,1109	0/0:15,0:15:39.12:0,39,529	0/0:14,0:14:42.14:0,42,586	0/0:55,0:55:99:0,163,2231	0/0:21,0:21:63.21:0,63,880	0/0:20,0:20:60.20:0,60,838	0/0:31,0:31:90.26:0,90,1237	0/0:18,0:18:54.18:0,54,755	1/1:8,29:38:53.09:609,53,0	1/1:0,14:14:41.62:293,42,0	0/1:2,1:3:0.97:38,0,1
chr10	16892904	.	A	AT	5475.46	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=20.274;DP=744;FS=9.691;HRun=3;HaplotypeScore=159.5902;InbreedingCoeff=0.9835;MQ=77.96;MQ0=1;MQRankSum=-18.538;QD=26.45;ReadPosRankSum=-1.180;VQSLOD=2.7857;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,132,1583	1/1:1,14:15:39.07:386,39,0	0/0:29,0:29:45.66:0,46,872	0/0:20,0:21:47.30:0,47,579	1/1:12,21:33:86.03:704,86,0	0/0:27,0:27:75.23:0,75,900	0/0:26,0:26:78.24:0,78,936	0/0:26,0:26:71.91:0,72,806	0/0:31,0:31:93.26:0,93,1093	1/1:6,17:23:62.78:624,63,0	1/1:2,19:21:59.97:557,60,0	0/0:42,0:42:99:0,120,1426	0/0:20,0:20:57.14:0,57,669	0/0:27,0:27:81.22:0,81,949	1/1:6,24:30:84.13:820,84,0	0/0:36,0:36:99:0,108,1295	1/1:8,12:19:53.67:516,54,0	0/0:28,0:28:75.23:0,75,896	0/0:15,0:15:42.13:0,42,503	0/0:15,0:15:39.12:0,39,468	0/0:55,0:55:99:0,153,1822	0/0:22,0:22:63.19:0,63,754	0/0:20,0:20:60.18:0,60,720	0/0:32,0:32:93.27:0,93,1104	0/0:19,0:19:54.16:0,54,648	1/1:17,29:46:93.26:1266,93,0	1/1:3,14:17:51.11:530,51,0	1/1:1,1:2:6.02:72,6,0
chr10	16894278	.	A	AGACAGGAAGAACAAGAAGCAATTA	48641.99	PASS	AB=0.764;AC=54;AF=0.964;AN=56;BaseQRankSum=-0.544;DP=354;FS=19.985;HRun=0;HaplotypeScore=422.7592;InbreedingCoeff=-0.0431;MQ=62.69;MQ0=0;MQRankSum=-2.440;QD=137.41;ReadPosRankSum=2.132;VQSLOD=4.0246;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:17:33.42:2102,33,0	1/1:6,0:6:12.04:912,12,0	0/1:5,0:7:23.72:959,0,24	0/1:6,2:9:12.26:976,0,12	1/1:14,0:14:27.09:1694,27,0	1/1:12,0:12:24.08:1786,24,0	1/1:15,0:15:33.11:2481,33,0	1/1:15,0:15:36.10:1843,36,0	1/1:17,0:17:30.40:1905,30,0	1/1:28,0:28:68.57:4325,69,0	1/1:5,0:5:9.03:581,9,0	1/1:19,0:19:26.97:1257,27,0	1/1:17,0:17:35.94:1848,36,0	1/1:13,0:13:24.08:1668,24,0	1/1:15,0:15:30.10:2332,30,0	1/1:19,0:19:42.13:2763,42,0	1/1:10,0:10:18.05:1003,18,0	1/1:5,0:5:12.04:464,12,0	1/1:9,0:9:23.57:878,24,0	1/1:7,0:7:15.05:885,15,0	1/1:12,0:12:15.05:1022,15,0	1/1:17,0:17:45.15:3526,45,0	1/1:7,0:7:18.06:1135,18,0	1/1:15,0:15:28.91:1968,29,0	1/1:11,0:11:24.08:2195,24,0	1/1:14,0:14:35.54:1931,36,0	1/1:14,0:14:39.13:3078,39,0	1/1:5,0:5:15.05:1124,15,0
chr10	16894830	.	A	ACCG	8926.18	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-10.626;DP=663;FS=9.398;HRun=0;HaplotypeScore=93.3704;InbreedingCoeff=0.9627;MQ=77.36;MQ0=0;MQRankSum=-5.202;QD=57.59;ReadPosRankSum=1.432;VQSLOD=6.3834;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,147,2471	1/1:0,1:2:3.01:69,3,0	0/0:23,0:23:59.21:0,59,981	0/0:21,0:21:54.16:0,54,863	1/1:2,12:15:33.11:747,33,0	0/0:21,0:21:63.21:0,63,1053	0/0:40,0:40:99:0,105,1782	0/0:34,0:34:96.32:0,96,1604	0/0:32,0:32:96.31:0,96,1605	1/1:1,20:22:63.20:1399,63,0	1/1:0,8:9:24.08:551,24,0	0/0:32,0:33:96.33:0,96,1620	0/0:30,0:30:90.31:0,90,1522	0/0:24,0:24:66.21:0,66,1095	1/1:2,21:23:60.14:1330,60,0	0/0:28,0:28:78.26:0,78,1294	1/1:5,29:35:90.31:2048,90,0	0/0:25,0:25:69.24:0,69,1153	0/0:21,0:21:60.20:0,60,989	0/0:16,0:16:48.12:0,48,787	0/0:36,0:36:99:0,105,1784	0/0:13,0:13:39.13:0,39,663	0/0:14,0:14:42.14:0,42,699	0/0:29,0:29:66.23:0,66,1117	0/0:13,0:13:36.12:0,36,614	1/1:2,23:25:72.25:1612,72,0	1/1:0,15:18:42.14:963,42,0	1/1:2,3:5:9.03:207,9,0
chr10	16896031	.	AAT	A	1124.36	PASS	AC=12;AF=0.333;AN=36;BaseQRankSum=4.755;DP=259;FS=12.817;HRun=0;HaplotypeScore=34.5912;InbreedingCoeff=0.6534;MQ=75.45;MQ0=12;MQRankSum=-0.477;QD=22.05;ReadPosRankSum=3.652;VQSLOD=2.6500;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:3,0:3:9.03:0,9,150	./.	0/0:42,0:7:12.01:0,12,120	0/0:91,1:26:16.76:0,17,227	1/1:1,0:1:3.01:39,3,0	./.	./.	0/0:37,0:37:99:0,99,1673	./.	1/1:1,1:2:3.01:39,3,0	./.	0/0:2,0:2:3.01:0,3,51	0/0:1,0:1:3.01:0,3,51	0/0:2,0:2:6.02:0,6,100	1/1:4,5:9:6.02:79,6,0	0/0:2,0:2:3.01:0,3,51	1/1:1,14:15:36.12:473,36,0	0/0:10,0:10:30.10:0,30,493	0/0:4,0:3:6.02:0,6,95	./.	0/0:1,0:1:3.01:0,3,51	./.	./.	./.	0/0:6,0:6:15.05:0,15,257	1/1:2,4:6:12.04:158,12,0	./.	1/1:3,15:18:36.12:473,36,0
chr10	16896814	.	C	CTGTG	1514.72	PASS	AB=0.969;AC=33;AF=0.786;AN=42;BaseQRankSum=-1.274;DP=666;FS=10.364;HRun=0;HaplotypeScore=134.0065;InbreedingCoeff=0.0137;MQ=63.18;MQ0=16;MQRankSum=-1.657;QD=2.98;ReadPosRankSum=-3.326;VQSLOD=1.0605;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:34,0:34:0:0,0,0	./.	./.	./.	0/1:19,0:18:32.47:32,0,52	1/1:23,0:23:15.03:224,15,0	1/1:42,0:42:9.84:142,10,0	./.	1/1:14,0:14:6.02:82,6,0	1/1:11,0:11:2.19:4,2,0	./.	1/1:33,0:33:24.05:283,24,0	1/1:23,0:23:11.57:122,12,0	1/1:29,0:27:5.22:64,5,0	1/1:23,0:23:9.96:109,10,0	0/1:24,0:24:0:0,0,0	1/1:43,0:43:12.55:107,13,0	0/1:23,0:24:33.55:34,0,63	./.	0/0:18,0:18:2.71:0,3,13	1/1:64,0:64:5.84:87,6,0	1/1:11,0:10:3.01:41,3,0	1/1:10,0:10:3.01:42,3,0	0/1:29,6:40:39.51:63,0,40	./.	1/1:26,0:25:13.83:142,14,0	0/1:10,0:10:17.95:18,0,22	0/1:4,0:3:31.87:35,0,32
chr10	16897248	.	CG	C	17022.71	PASS	AB=1.000;AC=54;AF=0.964;AN=56;BaseQRankSum=4.747;DP=655;FS=3.412;HRun=1;HaplotypeScore=300.0232;InbreedingCoeff=-0.0357;MQ=68.76;MQ0=0;MQRankSum=-4.053;QD=25.99;ReadPosRankSum=4.406;VQSLOD=4.0985;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:37,0:37:92.22:761,92,0	1/1:1,11:12:33.09:412,33,0	0/1:21,0:21:12.13:233,0,12	0/1:16,0:16:14.86:186,0,15	1/1:0,20:20:51.17:658,51,0	1/1:22,0:22:62.74:526,63,0	1/1:22,0:22:64.02:548,64,0	1/1:21,0:21:62.12:483,62,0	1/1:25,0:25:68.95:601,69,0	1/1:1,37:38:99:1455,114,0	1/1:0,18:18:45.15:582,45,0	1/1:28,0:28:76.97:668,77,0	1/1:19,0:19:56.80:499,57,0	1/1:37,0:37:99:868,102,0	1/1:0,38:38:99:1475,114,0	1/1:32,0:32:69.46:709,69,0	1/1:1,14:15:39.13:505,39,0	1/1:16,0:16:47.81:376,48,0	1/1:17,0:17:48.22:374,48,0	1/1:24,0:24:63.05:582,63,0	1/1:20,0:20:30:266,30,0	1/1:22,0:22:43.05:526,43,0	1/1:18,0:18:38.96:340,39,0	1/1:24,0:24:50.39:471,50,0	1/1:30,0:30:57.97:667,58,0	1/1:2,28:30:87.26:1109,87,0	1/1:3,24:27:72.17:911,72,0	1/1:0,6:6:18.06:233,18,0
chr10	16898706	.	CA	C	3893.94	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=7.957;DP=675;FS=7.089;HRun=2;HaplotypeScore=78.5042;InbreedingCoeff=0.9914;MQ=85.74;MQ0=4;MQRankSum=-3.593;QD=37.44;ReadPosRankSum=-2.306;VQSLOD=3.1271;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,132,1938	0/0:12,0:12:36.12:0,36,538	0/0:24,0:24:69.20:0,69,963	0/0:22,0:22:48.26:0,48,795	0/0:22,0:22:66.22:0,66,987	0/0:21,0:21:63.21:0,63,941	0/0:35,0:35:99:0,105,1516	1/1:1,23:24:69.20:879,69,0	0/0:26,0:26:78.26:0,78,1164	0/0:22,0:21:60.20:0,60,899	0/0:15,0:15:42.13:0,42,599	0/0:21,0:21:60.20:0,60,899	0/0:26,0:26:78.26:0,78,1169	0/0:23,0:23:69.20:0,69,984	0/0:41,0:41:99:0,114,1668	0/0:21,0:21:63.20:0,63,924	0/0:32,0:31:90.30:0,90,1344	0/0:23,0:23:66.14:0,66,935	1/1:4,20:24:69.22:883,69,0	1/1:3,21:24:69.22:889,69,0	1/1:1,31:32:96.31:1243,96,0	0/0:18,0:18:54.18:0,54,794	0/0:22,0:22:66.22:0,66,989	0/0:28,0:28:81.27:0,81,1213	0/0:14,0:14:42.14:0,42,629	0/0:30,0:28:81.25:0,81,1174	0/0:24,0:24:63.18:0,63,920	0/0:4,0:4:12.04:0,12,180
chr10	16898773	.	T	TCA	17994.46	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=10.943;DP=768;FS=1.506;HRun=0;HaplotypeScore=120.9282;InbreedingCoeff=0.9919;MQ=86.72;MQ0=4;MQRankSum=-4.315;QD=42.04;ReadPosRankSum=1.840;VQSLOD=6.1088;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,144,2120	1/1:2,12:14:35.88:663,36,0	0/0:27,0:27:75.21:0,75,1047	0/0:26,0:26:66.67:0,67,941	1/1:2,40:42:99:2134,114,0	0/0:25,0:25:72.21:0,72,1021	0/0:21,0:21:63.19:0,63,888	1/1:27,0:27:72.12:736,72,0	0/0:31,0:31:90.24:0,90,1263	1/1:3,19:21:57.20:1068,57,0	1/1:1,22:25:63.22:1161,63,0	0/0:29,0:29:87.28:0,87,1261	0/0:30,0:30:84.28:0,84,1235	0/0:23,0:23:69.18:0,69,955	1/1:2,38:40:99:1966,105,0	1/1:29,0:29:84.23:922,84,0	1/1:1,33:33:96.29:1761,96,0	1/1:21,0:21:60.17:680,60,0	1/1:18,0:18:51.10:524,51,0	1/1:33,0:33:99:1143,99,0	1/1:30,0:30:86.97:990,87,0	0/0:28,0:28:78.23:0,78,1107	0/0:28,0:28:84.24:0,84,1212	0/0:20,0:20:54.18:0,54,795	1/1:23,0:23:60.16:653,60,0	1/1:1,30:29:84.29:1574,84,0	1/1:1,34:36:99:1851,99,0	1/1:0,3:3:9.03:169,9,0
chr10	16898774	.	C	CAT	16939.48	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=3.882;DP=770;FS=1.838;HRun=0;HaplotypeScore=126.0599;InbreedingCoeff=0.9910;MQ=86.60;MQ0=4;MQRankSum=-4.620;QD=39.12;ReadPosRankSum=2.303;VQSLOD=6.4476;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,150,2250	1/1:13,0:13:36.09:386,36,0	0/0:27,0:27:78.22:0,78,1129	0/0:26,0:26:65.60:0,66,982	1/1:42,0:42:99:1219,114,0	0/0:24,0:24:72.24:0,72,1097	0/0:21,0:21:63.20:0,63,940	1/1:4,23:27:78.25:1441,78,0	0/0:31,0:31:90.27:0,90,1347	1/1:22,0:21:19.12:494,19,0	1/1:25,0:25:62.95:669,63,0	0/0:29,0:29:87.30:0,87,1329	0/0:29,0:29:84.29:0,84,1285	0/0:23,0:23:69.20:0,69,1009	1/1:40,0:40:99:1108,105,0	1/1:2,28:30:84.29:1623,84,0	1/1:33,0:32:93.70:997,94,0	1/1:0,21:22:60.21:1159,60,0	1/1:2,17:20:57.20:1095,57,0	1/1:1,33:35:99:1907,99,0	1/1:1,30:31:87.03:1671,87,0	0/0:28,0:28:81.25:0,81,1195	0/0:28,0:28:84.24:0,84,1261	0/0:21,0:21:60.14:0,60,871	1/1:1,22:23:60.21:1159,60,0	1/1:31,0:29:84.15:834,84,0	1/1:36,0:36:99:1080,99,0	1/1:3,0:3:9.02:97,9,0
chr10	16899293	.	TG	T	7341.58	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=19.015;DP=610;FS=5.414;HRun=2;HaplotypeScore=114.0487;InbreedingCoeff=0.9999;MQ=81.77;MQ0=0;MQRankSum=-5.678;QD=35.99;ReadPosRankSum=1.174;VQSLOD=4.4905;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,129,1826	1/1:0,10:10:30.10:386,30,0	0/0:23,0:23:65.39:0,65,900	0/0:19,0:19:55.69:0,56,761	1/1:0,24:24:66.17:836,66,0	0/0:13,0:13:39.10:0,39,560	0/0:19,0:19:54.18:0,54,808	0/0:32,0:31:93.31:0,93,1374	0/0:18,0:18:54.15:0,54,766	1/1:1,23:24:68.89:868,69,0	1/1:0,20:20:60.15:759,60,0	0/0:24,0:24:69.23:0,69,1034	0/0:19,0:19:57.18:0,57,833	0/0:16,0:16:45.15:0,45,657	1/1:1,27:28:81.20:1030,81,0	0/0:17,0:17:51.16:0,51,743	1/1:2,30:32:90.29:1165,90,0	0/0:25,0:25:75.25:0,75,1121	0/0:22,0:22:64.46:0,64,947	0/0:18,0:18:54.18:0,54,807	0/0:28,0:28:81.27:0,81,1214	0/0:13,0:13:39.13:0,39,583	0/0:18,0:18:50.90:0,51,741	0/0:22,0:22:60.20:0,60,890	0/0:15,0:15:44.98:0,45,643	1/1:2,27:29:78.21:994,78,0	1/1:1,24:25:69.17:875,69,0	1/1:1,11:12:33.11:428,33,0
chr10	16900915	.	CCTGG	C	149.48	PASS	AB=0.774;AC=1;AF=0.018;AN=56;BaseQRankSum=3.784;DP=808;FS=7.360;HRun=0;HaplotypeScore=132.6579;InbreedingCoeff=-0.0182;MQ=73.95;MQ0=0;MQRankSum=-0.705;QD=6.23;ReadPosRankSum=-1.733;VQSLOD=1.8802;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,151,4141	0/0:14,0:14:39.13:0,39,1091	0/1:14,7:22:99:224,0,1015	0/0:20,3:20:57.18:0,57,1417	0/0:18,0:18:51.18:0,51,1409	0/0:23,0:23:66.21:0,66,1787	0/0:38,0:38:99:0,111,3055	0/0:31,0:31:87.30:0,87,2429	0/0:31,0:31:93.30:0,93,2517	0/0:29,0:29:87.29:0,87,2318	0/0:19,0:19:57.18:0,57,1511	0/0:37,0:37:99:0,108,2990	0/0:23,0:23:66.23:0,66,1827	0/0:34,0:34:99:0,99,2700	0/0:33,0:33:99:0,99,2737	0/0:44,0:44:99:0,129,3480	0/0:43,0:42:99:0,129,3536	0/0:27,0:27:81.28:0,81,2243	0/0:21,0:21:63.22:0,63,1750	0/0:20,0:20:60.21:0,60,1646	0/0:75,0:75:99:0,220,5910	0/0:21,0:21:63.22:0,63,1701	0/0:13,0:13:39.13:0,39,1091	0/0:17,0:17:51.18:0,51,1417	0/0:15,0:15:42.14:0,42,1174	0/0:29,0:29:87.30:0,87,2401	0/0:38,0:38:99:0,111,2974	0/0:15,0:15:42.09:0,42,975
chr10	16902403	.	AG	A	5131.84	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=8.902;DP=672;FS=8.404;HRun=7;HaplotypeScore=92.7313;InbreedingCoeff=0.9997;MQ=76.33;MQ0=0;MQRankSum=-3.578;QD=26.45;ReadPosRankSum=1.992;VQSLOD=5.1360;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,114,1364	1/1:1,12:13:36.08:367,36,0	0/0:21,0:21:54.17:0,54,666	0/0:27,0:27:66.15:0,66,779	1/1:3,27:30:54.35:740,54,0	0/0:18,0:18:54.16:0,54,665	0/0:33,0:33:87.24:0,87,1063	0/0:28,0:28:78.24:0,78,962	0/0:18,0:18:54.17:0,54,679	1/1:4,28:32:84.19:856,84,0	1/1:2,10:12:33.07:335,33,0	0/0:15,0:15:33.09:0,33,402	0/0:25,0:25:63.20:0,63,785	0/0:31,0:31:84.26:0,84,1043	1/1:2,23:25:69.15:703,69,0	0/0:28,0:28:78.25:0,78,980	1/1:3,27:30:78.18:796,78,0	0/0:19,0:18:48.15:0,48,604	0/0:23,0:23:60.17:0,60,739	0/0:23,0:23:69.21:0,69,853	0/0:33,0:33:84.27:0,84,1054	0/0:19,0:19:57.18:0,57,714	0/0:22,0:22:63.20:0,63,789	0/0:27,0:27:72.21:0,72,885	0/0:25,0:25:66.19:0,66,805	1/1:4,21:25:69.12:691,69,0	1/1:4,14:18:36.07:367,36,0	1/1:0,9:9:27.06:275,27,0
chr10	16902410	.	GT	G	878.74	PASS	AB=0.991;AC=14;AF=0.250;AN=56;BaseQRankSum=14.786;DP=664;FS=0.710;HRun=1;HaplotypeScore=103.7747;InbreedingCoeff=0.6029;MQ=77.06;MQ0=0;MQRankSum=-3.699;QD=4.51;ReadPosRankSum=3.742;VQSLOD=0.5122;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,120,1620	1/1:13,0:13:4.08:57,4,0	0/0:24,0:24:72.18:0,72,962	0/0:27,0:27:75.87:0,76,1038	0/1:32,0:31:22.13:149,0,22	0/0:19,0:19:57.16:0,57,808	0/0:30,0:30:87.28:0,87,1267	0/0:36,0:36:99:0,108,1363	0/0:19,0:19:57.18:0,57,832	1/1:28,0:28:42.04:155,42,0	1/1:11,1:12:3.44:86,3,0	0/0:12,0:12:36.09:0,36,499	0/0:24,0:24:72.19:0,72,990	0/0:30,0:30:87.24:0,87,1218	0/1:27,1:28:51.24:141,0,51	0/0:27,0:27:81.20:0,81,1144	1/1:29,0:29:17.01:142,17,0	0/0:17,0:16:51.13:0,51,708	0/0:19,0:19:57.19:0,57,850	0/0:26,0:26:78.21:0,78,1077	0/0:31,0:31:93.24:0,93,1323	0/0:19,0:19:57.19:0,57,838	0/0:22,0:22:66.21:0,66,947	0/0:24,0:24:72.22:0,72,1045	0/0:22,0:22:63.19:0,63,880	1/1:23,2:25:45.75:233,46,0	0/1:18,0:18:50.43:50,0,84	0/1:10,0:10:0.61:40,0,1
chr10	16902451	.	GC	G	4256.74	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=5.335;DP=695;FS=34.160;HRun=2;HaplotypeScore=80.4714;InbreedingCoeff=1.0000;MQ=64.53;MQ0=0;MQRankSum=0.445;QD=38.01;ReadPosRankSum=-1.155;VQSLOD=2.1900;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,123,1836	0/0:17,0:17:51.17:0,51,764	0/0:21,0:21:63.20:0,63,908	0/0:25,0:25:68.99:0,69,995	0/0:37,0:37:99:0,108,1588	0/0:27,0:27:81.27:0,81,1213	0/0:22,0:22:63.21:0,63,943	1/1:1,33:34:99:1231,99,0	0/0:16,0:16:48.16:0,48,719	0/0:24,0:24:72.22:0,72,1023	0/0:19,0:19:57.19:0,57,854	0/0:26,0:25:75.24:0,75,1104	0/0:27,0:27:81.24:0,81,1171	0/0:23,0:23:66.21:0,66,967	0/0:34,0:34:93.31:0,93,1384	0/0:27,0:27:81.27:0,81,1196	0/0:24,0:24:69.23:0,69,1034	0/0:20,0:19:54.18:0,54,809	1/1:0,24:24:72.23:923,72,0	1/1:0,31:31:93.30:1207,93,0	1/1:0,23:23:69.22:896,69,0	0/0:24,0:24:72.24:0,72,1079	0/0:24,0:24:72.24:0,72,1075	0/0:24,0:24:69.19:0,69,972	0/0:18,0:18:54.17:0,54,788	0/0:24,0:24:72.19:0,72,1035	0/0:25,0:25:72.24:0,72,1077	0/0:13,0:13:39.13:0,39,584
chr10	16902631	.	A	ACAGC	14906.33	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-4.942;DP=700;FS=18.274;HRun=0;HaplotypeScore=113.9381;InbreedingCoeff=0.9951;MQ=75.53;MQ0=0;MQRankSum=-7.088;QD=72.71;ReadPosRankSum=1.279;VQSLOD=5.3586;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,120,2280	1/1:0,5:5:12.04:328,12,0	0/0:22,0:22:60.20:0,60,1118	0/0:17,0:18:36.16:0,36,707	1/1:4,20:26:60.21:1585,60,0	0/0:24,0:24:72.23:0,72,1353	0/0:23,0:23:66.21:0,66,1233	0/0:40,0:40:99:0,120,2216	0/0:22,0:22:66.23:0,66,1279	1/1:3,16:20:54.19:1459,54,0	1/1:2,15:17:48.16:1286,48,0	0/0:41,0:41:99:0,120,2285	0/0:22,0:22:65.02:0,65,1192	0/0:19,0:19:57.20:0,57,1105	1/1:3,34:37:99:2693,99,0	0/0:26,0:26:78.25:0,78,1468	1/1:2,26:29:81.28:2215,81,0	0/0:25,0:25:75.26:0,75,1454	0/0:24,0:24:66.20:0,66,1213	0/0:17,0:17:51.17:0,51,980	0/0:28,0:28:84.29:0,84,1609	0/0:20,0:20:57.20:0,57,1098	0/0:29,0:29:84.29:0,84,1614	0/0:28,0:28:81.26:0,81,1536	0/0:26,0:26:78.27:0,78,1512	1/1:3,23:29:81.24:1976,81,0	1/1:1,26:29:84.29:2297,84,0	1/1:0,13:13:39.13:1067,39,0
chr10	16902846	.	G	GGTTTTT	4640.05	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=12.436;DP=561;FS=30.480;HRun=0;HaplotypeScore=139.7997;InbreedingCoeff=0.9749;MQ=64.13;MQ0=0;MQRankSum=-10.033;QD=34.12;ReadPosRankSum=-1.570;VQSLOD=2.5138;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:87.02:0,87,1782	1/1:4,1:5:9.02:201,9,0	0/0:22,0:15:35.45:0,35,611	0/0:12,0:9:17.82:0,18,261	1/1:14,0:14:19.88:388,20,0	0/0:19,0:18:57.16:0,57,1301	0/0:24,0:24:72.22:0,72,1610	0/0:31,0:31:90.19:0,90,1682	0/0:29,0:29:81.26:0,81,1873	1/1:21,1:22:46.37:806,46,0	1/1:7,0:7:9.67:88,10,0	0/0:11,0:11:30.10:0,30,709	0/0:24,0:24:72.23:0,72,1732	0/0:18,0:18:51.12:0,51,1087	1/1:16,1:17:23.22:633,23,0	0/0:21,0:21:51.16:0,51,1178	1/1:12,3:14:27.65:583,28,0	0/0:22,0:22:54.15:0,54,1247	0/0:25,0:25:65.10:0,65,1425	0/0:34,0:34:99:0,99,2064	0/0:12,0:12:33.11:0,33,806	0/0:17,0:17:48.14:0,48,1121	0/0:20,0:20:60.12:0,60,1364	0/0:21,0:21:63.22:0,63,1568	0/0:31,0:31:89.40:0,89,2097	1/1:28,1:29:55.71:1062,56,0	1/1:16,0:18:27.03:591,27,0	1/1:9,0:9:12.04:288,12,0
chr10	16902847	.	AT	A	666.99	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=3.212;DP=577;FS=5.803;HRun=11;HaplotypeScore=100.4346;InbreedingCoeff=0.8829;MQ=63.58;MQ0=0;MQRankSum=3.167;QD=15.51;ReadPosRankSum=2.456;VQSLOD=4.0587;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:30:41.42:0,41,630	0/0:5,0:5:5.68:0,6,28	0/0:23,0:15:15.40:0,15,201	0/0:13,0:9:11.51:0,12,101	0/0:14,0:14:13.36:0,13,75	0/0:19,0:18:48.12:0,48,512	0/0:24,0:24:41.63:0,42,590	0/0:30,0:32:58.79:0,59,594	0/0:25,3:29:41.35:0,41,629	0/0:23,0:23:22.19:0,22,162	0/0:9,0:9:11.98:0,12,68	0/0:12,0:12:30.06:0,30,312	0/0:24,0:24:66.15:0,66,694	0/0:17,0:17:39.09:0,39,409	0/0:17,0:17:22.47:0,22,112	1/1:1,20:21:47.94:394,48,0	0/0:18,0:17:32.61:0,33,160	1/1:2,20:22:47.94:394,48,0	0/0:24,0:25:47.95:0,48,491	0/0:32,3:35:31.91:0,32,743	0/0:13,0:13:30.08:0,30,320	0/0:18,0:18:42.11:0,42,448	0/0:20,0:20:48.12:0,48,511	0/0:22,1:23:41.46:0,41,626	0/0:30,1:31:48.01:0,48,711	0/0:29,0:29:42.88:0,43,330	0/0:18,0:18:15.13:0,15,102	0/0:13,0:12:15.44:0,15,72
chr10	16902856	.	T	TTTTTTTG	5794.54	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=10.480;DP=610;FS=33.298;HRun=0;HaplotypeScore=151.7971;InbreedingCoeff=0.9234;MQ=63.06;MQ0=0;MQRankSum=-9.008;QD=27.33;ReadPosRankSum=-2.861;VQSLOD=2.6879;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:75.15:0,75,1362	1/1:2,0:9:8.94:168,9,0	0/1:24,0:15:3.71:4,0,351	0/0:17,0:13:22.20:0,22,264	1/1:1,1:14:18.02:409,18,0	0/0:20,0:19:57.13:0,57,1153	0/0:24,0:24:65.16:0,65,1089	0/0:29,0:29:57.44:0,57,1142	0/0:27,0:27:75.22:0,75,1454	1/1:4,1:27:67.27:938,67,0	1/1:10,0:11:15.98:165,16,0	0/0:13,0:13:39.09:0,39,674	0/0:23,0:23:66.20:0,66,1478	0/0:16,0:16:42.07:0,42,833	1/1:4,2:27:27.09:731,27,0	0/0:23,0:23:56.63:0,57,795	1/1:8,0:21:30.56:547,31,0	0/0:25,0:25:62.53:0,63,833	0/0:21,0:21:50.13:0,50,935	0/0:32,0:32:93.21:0,93,1710	0/0:13,0:13:36.10:0,36,607	0/0:17,0:17:48.12:0,48,949	0/0:20,0:20:57.13:0,57,1079	0/0:22,0:22:66.14:0,66,1269	0/0:29,0:29:67.25:0,67,1494	1/1:4,0:38:85.38:1776,85,0	1/1:4,1:24:29.70:712,30,0	1/1:5,0:15:10.40:344,10,0
chr10	16903339	.	G	GCT	1352.64	PASS	AB=0.853;AC=31;AF=0.596;AN=52;BaseQRankSum=-0.433;DP=517;FS=13.806;HRun=0;HaplotypeScore=111.3760;InbreedingCoeff=0.4038;MQ=58.48;MQ0=7;MQRankSum=-4.089;QD=3.63;ReadPosRankSum=-3.914;VQSLOD=0.2076;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:32:29.70:0,30,287	./.	1/1:21,0:12:0.47:1,0,0	./.	0/1:23,0:21:0:0,0,0	0/1:7,9:18:35.55:79,0,36	0/1:10,11:22:5.71:152,0,6	1/1:33,7:39:3.62:311,4,0	0/0:10,0:10:5.07:0,5,114	1/1:20,0:19:5.82:55,6,0	1/1:18,0:17:5.82:36,6,0	0/0:21,0:22:35.92:0,36,374	0/0:11,0:12:17.53:0,18,176	0/1:16,1:17:15.37:15,0,262	0/1:14,0:14:0:0,0,0	1/1:19,0:17:2.43:17,2,0	1/1:12,0:10:2.74:12,3,0	1/1:13,0:13:9.37:62,9,0	1/1:9,7:15:20.93:259,21,0	1/1:12,6:19:23.84:311,24,0	0/1:7,4:11:45.85:79,0,46	0/0:10,0:10:11.99:0,12,120	0/0:13,0:14:17.88:0,18,182	0/0:14,0:14:18.02:0,18,182	1/1:26,0:26:2.42:25,2,0	1/1:28,0:26:2.16:7,2,0	1/1:26,0:25:14.43:89,14,0	0/1:10,0:10:0:0,0,0
chr10	16903491	.	T	TGC	10763.08	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=3.794;DP=543;FS=1.654;HRun=0;HaplotypeScore=62.8789;InbreedingCoeff=0.9699;MQ=49.58;MQ0=25;MQRankSum=-14.266;QD=43.93;ReadPosRankSum=-4.843;VQSLOD=4.5814;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,147,2375	1/1:1,12:12:26.85:536,27,0	0/0:30,0:3:9.03:0,9,136	0/0:28,0:7:15.05:0,15,244	1/1:0,17:17:42.14:830,42,0	0/0:30,0:30:87.30:0,87,1420	0/0:16,0:16:48.16:0,48,783	1/1:9,21:30:81.19:1556,81,0	0/0:11,0:11:33.10:0,33,513	1/1:3,13:15:45.14:876,45,0	1/1:0,7:8:15.05:303,15,0	0/0:25,0:25:75.24:0,75,1198	0/0:21,0:21:63.22:0,63,1028	0/0:18,0:17:48.16:0,48,783	1/1:1,16:17:39.13:783,39,0	1/1:0,16:15:27.09:547,27,0	1/1:0,2:2:6.02:122,6,0	1/1:0,10:10:15.05:304,15,0	1/1:2,13:15:45.15:893,45,0	1/1:2,21:23:39.13:766,39,0	1/1:1,12:13:30.10:606,30,0	0/0:22,0:22:66.23:0,66,1077	0/0:20,0:20:60.20:0,60,979	0/0:27,0:27:81.28:0,81,1322	1/1:1,18:20:33.11:669,33,0	1/1:1,16:17:45.14:876,45,0	1/1:0,13:14:24.08:486,24,0	1/1:0,11:11:30.10:608,30,0
chr10	16904243	.	T	TGG	13727.43	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=13.822;DP=817;FS=1.600;HRun=0;HaplotypeScore=111.9578;InbreedingCoeff=0.9999;MQ=90.16;MQ0=0;MQRankSum=-3.723;QD=55.80;ReadPosRankSum=4.773;VQSLOD=4.9503;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:81.23:0,81,1245	1/1:0,14:14:36.12:728,36,0	0/0:35,0:35:99:0,99,1556	0/0:28,0:28:84.23:0,84,1276	1/1:2,26:30:75.26:1523,75,0	0/0:27,0:27:78.27:0,78,1273	0/0:26,0:26:78.24:0,78,1244	0/0:44,0:44:99:0,129,2057	0/0:36,0:36:99:0,108,1711	1/1:0,27:27:81.26:1611,81,0	1/1:1,24:25:72.25:1455,72,0	0/0:42,0:42:99:0,120,1957	0/0:28,0:28:84.27:0,84,1339	0/0:32,0:32:96.26:0,96,1511	1/1:3,40:43:99:2431,120,0	0/0:43,0:43:99:0,129,2080	1/1:0,19:20:48.16:951,48,0	0/0:26,0:26:78.27:0,78,1272	0/0:22,0:22:63.22:0,63,1024	0/0:23,0:23:63.22:0,63,1028	0/0:35,0:35:99:0,99,1615	0/0:24,0:24:72.25:0,72,1175	0/0:25,0:25:75.26:0,75,1212	0/0:29,0:29:87.30:0,87,1417	0/0:19,0:19:57.19:0,57,930	1/1:1,42:43:99:2534,126,0	1/1:2,30:32:90.31:1824,90,0	1/1:1,10:11:33.11:670,33,0
chr10	16904634	.	TG	T	5437.13	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-0.319;DP=614;FS=0.332;HRun=6;HaplotypeScore=77.2695;InbreedingCoeff=0.9954;MQ=84.29;MQ0=0;MQRankSum=-1.087;QD=28.77;ReadPosRankSum=0.873;VQSLOD=5.3905;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:81.26:0,81,1059	0/0:6,0:6:18.04:0,18,209	0/0:16,0:17:38.60:0,39,461	0/0:23,0:23:60.13:0,60,750	0/0:18,0:18:29.17:0,29,514	0/0:20,0:20:54.18:0,54,711	0/0:24,0:24:60.19:0,60,788	1/1:3,24:27:69.17:741,69,0	0/0:23,0:23:63.20:0,63,823	0/0:18,0:18:43.46:0,43,509	0/0:15,0:15:41.91:0,42,489	0/0:20,0:20:60.14:0,60,738	0/0:33,0:33:99:0,99,1271	0/0:17,0:17:42.14:0,42,552	0/0:21,0:21:54.17:0,54,681	1/1:1,25:26:72.18:774,72,0	0/0:35,0:35:96.30:0,96,1196	1/1:1,39:40:99:1161,108,0	1/1:2,14:16:42.08:441,42,0	1/1:3,17:20:51.10:547,51,0	1/1:1,42:43:99:1322,123,0	0/0:21,0:21:51.16:0,51,662	0/0:17,0:17:45.15:0,45,587	0/0:26,0:26:78.25:0,78,1025	1/1:3,14:17:42.10:450,42,0	0/0:22,0:22:48.15:0,48,607	0/0:12,0:12:33.55:0,34,385	0/0:6,0:6:15.05:0,15,189
chr10	16904640	.	GT	G	863.87	PASS	AB=0.970;AC=11;AF=0.196;AN=56;BaseQRankSum=12.497;DP=616;FS=1.051;HRun=1;HaplotypeScore=88.8292;InbreedingCoeff=0.5766;MQ=82.44;MQ0=0;MQRankSum=-2.725;QD=4.48;ReadPosRankSum=2.511;VQSLOD=0.5620;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:99:0,99,1342	0/0:6,0:6:18.05:0,18,252	0/0:16,1:17:45.78:0,46,581	0/0:20,0:20:57.17:0,57,821	0/0:18,0:18:47.40:0,47,644	0/0:20,0:20:60.16:0,60,838	0/0:20,0:20:60.20:0,60,903	0/1:27,1:28:34.62:85,0,35	0/0:22,0:22:66.21:0,66,986	0/0:19,0:19:51.15:0,51,696	0/0:14,0:14:42.09:0,42,575	0/0:22,0:22:63.17:0,63,886	0/0:34,0:34:99:0,99,1459	0/0:18,0:18:51.07:0,51,706	0/0:22,0:22:66.11:0,66,854	1/1:25,0:25:53.78:184,54,0	0/0:37,0:37:99:0,108,1499	1/1:44,0:44:0.72:184,1,0	0/1:16,0:16:19.69:50,0,20	1/1:18,1:19:7.23:135,7,0	1/1:44,0:44:55.42:294,55,0	0/0:20,0:20:57.17:0,57,814	0/0:15,0:15:45.15:0,45,667	0/0:27,0:27:81.26:0,81,1205	0/1:16,1:17:13.25:90,0,13	0/0:20,0:20:54.16:0,54,771	0/0:14,0:14:42.07:0,42,539	0/0:5,0:5:15.05:0,15,223
chr10	16906126	.	GTTTTTT	G	4051.83	PASS	AB=1.000;AC=22;AF=0.393;AN=56;BaseQRankSum=15.542;DP=600;FS=6.327;HRun=15;HaplotypeScore=206.3500;InbreedingCoeff=0.8231;MQ=68.23;MQ0=9;MQRankSum=-12.448;QD=18.01;ReadPosRankSum=6.822;VQSLOD=-0.4294;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:20:44.37:0,44,1260	1/1:3,8:13:23.02:267,23,0	0/0:51,0:19:25.53:0,26,236	0/0:29,0:15:9.56:0,10,204	1/1:11,13:32:72.85:521,73,0	0/0:21,0:24:63.13:0,63,1523	0/0:32,0:36:96.22:0,96,2384	0/0:21,0:21:9.91:0,10,223	0/0:11,0:11:30.09:0,30,872	1/1:3,8:15:35.43:365,35,0	1/1:5,7:16:33.69:254,34,0	0/0:11,0:14:30.07:0,30,669	0/0:18,0:21:54.15:0,54,1354	0/0:19,0:19:40.62:0,41,941	1/1:5,16:22:57.47:533,57,0	0/0:12,0:22:54.16:0,54,804	1/1:7,7:20:10.89:235,11,0	0/0:16,0:22:51.42:0,51,616	0/1:9,0:8:13.59:14,0,80	0/1:18,0:18:38.92:39,0,78	0/0:9,0:8:11.93:0,12,91	0/0:13,0:17:44.95:0,45,905	0/0:27,0:27:75.15:0,75,1631	0/0:25,0:27:71.83:0,72,1845	1/1:4,11:17:32.67:383,33,0	1/1:6,12:22:36.46:455,36,0	1/1:7,23:32:80.82:781,81,0	1/1:1,6:9:11.40:204,11,0
chr10	16906146	.	T	TG	5976.45	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=16.960;DP=587;FS=2.422;HRun=0;HaplotypeScore=164.0626;InbreedingCoeff=0.9459;MQ=58.68;MQ0=13;MQRankSum=-12.771;QD=24.70;ReadPosRankSum=4.984;VQSLOD=5.0365;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:63.09:0,63,793	1/1:3,11:14:38.74:401,39,0	0/0:63,0:16:32.82:0,33,322	0/1:43,0:14:2.08:2,0,131	1/1:6,21:27:75.15:729,75,0	0/0:21,0:21:63.14:0,63,811	0/0:25,0:25:75.10:0,75,955	0/0:13,0:13:30.24:0,30,203	0/0:12,0:12:35.82:0,36,424	1/1:2,14:16:48.08:546,48,0	1/1:4,11:15:25.14:371,25,0	0/0:12,0:12:32.96:0,33,401	0/0:19,0:19:53.91:0,54,621	0/0:15,0:15:40.27:0,40,434	1/1:0,22:22:66.13:711,66,0	0/0:26,0:26:69.18:0,69,855	1/1:7,19:25:69.31:740,69,0	0/0:24,0:24:67.40:0,67,704	0/0:9,0:8:17.12:0,17,116	0/0:13,0:13:30.92:0,31,190	0/0:5,0:4:11.89:0,12,84	0/0:15,0:15:36.81:0,37,466	0/0:22,0:22:63.12:0,63,770	0/0:28,0:28:77.67:0,78,930	1/1:1,18:19:57.13:636,57,0	1/1:1,15:16:48.12:525,48,0	1/1:4,30:34:93.67:1014,94,0	1/1:1,9:10:27.54:300,28,0
chr10	16906155	.	T	TG	5752.63	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=15.692;DP=556;FS=2.070;HRun=0;HaplotypeScore=153.7729;InbreedingCoeff=0.9942;MQ=59.93;MQ0=12;MQRankSum=-12.558;QD=31.10;ReadPosRankSum=7.513;VQSLOD=3.9896;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:65.93:0,66,864	1/1:0,11:11:31.89:358,32,0	0/0:57,0:17:23.13:0,23,378	0/0:39,0:14:25.10:0,25,257	1/1:1,20:21:45:474,45,0	0/0:18,0:18:54.07:0,54,665	0/0:25,0:25:72.18:0,72,912	0/0:15,0:15:34.93:0,35,251	0/0:11,0:11:33.03:0,33,391	1/1:1,12:13:39.11:480,39,0	1/1:3,11:14:32.45:363,32,0	0/0:14,0:14:39.03:0,39,446	0/0:18,0:18:51.05:0,51,590	0/0:13,0:13:32.78:0,33,376	1/1:0,23:23:66.12:752,66,0	0/0:23,0:23:58.75:0,59,367	1/1:0,22:21:54.17:718,54,0	0/0:19,0:19:44.75:0,45,269	0/0:11,0:10:26.60:0,27,205	0/0:15,0:15:33.64:0,34,236	0/0:6,0:5:11.90:0,12,84	0/0:15,0:15:38.96:0,39,517	0/0:20,0:20:57.15:0,57,739	0/0:27,0:27:75.20:0,75,956	1/1:0,19:19:51.13:614,51,0	1/1:0,17:17:51.10:594,51,0	1/1:1,32:33:89.90:1022,90,0	1/1:0,12:12:30.09:377,30,0
chr10	16906647	.	ACTCAC	A	4948.48	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=15.385;DP=544;FS=1.802;HRun=0;HaplotypeScore=149.4428;InbreedingCoeff=0.9894;MQ=74.45;MQ0=0;MQRankSum=-14.500;QD=45.82;ReadPosRankSum=3.052;VQSLOD=5.1372;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:90.27:0,90,2719	1/1:0,8:8:24.08:407,24,0	0/0:19,0:19:56.66:0,57,1522	0/0:16,0:16:44.90:0,45,972	1/1:2,10:12:29.77:382,30,0	0/0:18,0:18:48.16:0,48,1507	0/0:23,0:23:66.21:0,66,2009	0/0:27,0:27:75.24:0,75,2171	0/0:18,0:18:54.19:0,54,1696	1/1:2,10:12:36.09:565,36,0	1/1:0,11:11:33.11:542,33,0	0/0:28,0:28:81.28:0,81,2571	0/0:23,0:23:69.24:0,69,2228	0/0:30,0:30:90.31:0,90,2858	1/1:2,14:17:48.14:763,48,0	0/0:25,0:25:75.26:0,75,2355	1/1:0,13:13:36.42:574,36,0	0/0:30,0:30:90.31:0,90,2808	0/0:14,0:14:39.13:0,39,1254	0/0:17,0:17:51.18:0,51,1618	0/0:48,0:48:99:0,144,4365	0/0:9,0:9:20.88:0,21,535	0/0:12,0:12:33.11:0,33,987	0/0:39,0:39:99:0,117,3780	0/0:9,0:9:27.09:0,27,873	1/1:0,10:10:30.10:523,30,0	1/1:2,20:22:63.19:1037,63,0	1/1:0,3:3:9.03:156,9,0
chr10	16906655	.	GCC	G	2592	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=15.228;DP=573;FS=1.853;HRun=2;HaplotypeScore=123.9380;InbreedingCoeff=0.9893;MQ=76.44;MQ0=0;MQRankSum=-14.796;QD=25.92;ReadPosRankSum=4.730;VQSLOD=2.9181;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,102,2017	1/1:0,8:8:24.05:240,24,0	0/0:19,0:19:56.50:0,56,935	0/0:15,0:14:32.31:0,32,614	1/1:0,10:10:20.39:180,20,0	0/0:22,0:22:63.20:0,63,1217	0/0:22,0:22:63.22:0,63,1280	0/0:22,0:22:63.20:0,63,1208	0/0:20,0:20:60.21:0,60,1181	1/1:0,10:10:30.05:310,30,0	1/1:0,11:11:33.04:316,33,0	0/0:32,0:32:96.33:0,96,1896	0/0:27,0:27:81.28:0,81,1628	0/0:35,0:35:99:0,102,2034	1/1:1,14:15:40.28:409,40,0	0/0:24,0:24:72.22:0,72,1390	1/1:0,13:13:33.08:344,33,0	0/0:29,0:29:87.30:0,87,1745	0/0:16,0:16:48.16:0,48,940	0/0:20,0:20:60.21:0,60,1219	0/0:53,0:53:99:0,157,3129	0/0:11,0:11:27.56:0,28,511	0/0:14,0:14:42.14:0,42,831	0/0:42,0:42:99:0,126,2540	0/0:16,0:16:48.16:0,48,941	1/1:0,10:10:30.07:317,30,0	1/1:0,20:20:60.10:597,60,0	1/1:0,3:3:9.02:92,9,0
chr10	16906658	.	ACC	A	2753.30	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=15.556;DP=578;FS=1.301;HRun=2;HaplotypeScore=123.7707;InbreedingCoeff=0.9891;MQ=77.66;MQ0=0;MQRankSum=-14.437;QD=26.22;ReadPosRankSum=3.694;VQSLOD=2.9936;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,102,2057	1/1:0,8:8:24.05:249,24,0	0/0:20,0:20:53.76:0,54,909	0/0:15,0:14:42.02:0,42,699	1/1:0,10:10:18.91:179,19,0	0/0:21,0:21:60.21:0,60,1211	0/0:22,0:22:63.22:0,63,1280	0/0:22,0:22:66.21:0,66,1274	0/0:20,0:20:60.15:0,60,1141	1/1:2,9:11:32.29:323,32,0	1/1:1,10:11:33.05:324,33,0	0/0:33,0:33:99:0,99,1914	0/0:27,0:27:81.28:0,81,1644	0/0:35,0:35:99:0,105,2030	1/1:3,14:17:51.07:495,51,0	0/0:22,0:22:66.23:0,66,1339	1/1:2,13:15:37.62:371,38,0	0/0:29,0:29:87.30:0,87,1767	0/0:18,0:18:54.16:0,54,1026	0/0:20,0:20:60.21:0,60,1218	0/0:53,0:53:99:0,160,3151	0/0:11,0:11:27.08:0,27,514	0/0:14,0:14:42.14:0,42,830	0/0:42,0:42:99:0,126,2520	0/0:15,0:15:45.15:0,45,914	1/1:0,10:10:30.07:320,30,0	1/1:0,20:20:60.10:612,60,0	1/1:0,3:3:9.02:95,9,0
chr10	16906923	.	C	CTTG	9536.47	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-12.380;DP=600;FS=8.007;HRun=0;HaplotypeScore=79.1707;InbreedingCoeff=0.9490;MQ=90.33;MQ0=0;MQRankSum=-4.325;QD=62.74;ReadPosRankSum=2.179;VQSLOD=6.3896;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,129,2292	1/1:0,1:1:3.01:74,3,0	0/0:21,0:21:63.19:0,63,1128	0/0:26,0:26:69.24:0,69,1267	1/1:0,15:17:41.81:934,42,0	0/0:15,0:15:45.15:0,45,839	0/0:24,0:24:72.25:0,72,1333	0/0:32,0:32:87.26:0,87,1559	0/0:20,0:20:60.21:0,60,1111	1/1:0,15:18:54.17:1232,54,0	1/1:0,7:7:12.04:295,12,0	0/0:37,0:37:99:0,111,2068	0/0:21,0:21:63.22:0,63,1161	0/0:27,0:27:81.28:0,81,1510	1/1:1,30:33:84.29:2056,84,0	0/0:20,0:20:60.19:0,60,1079	1/1:0,35:37:96.33:2367,96,0	0/0:29,0:29:81.23:0,81,1462	0/0:23,0:23:69.19:0,69,1251	0/0:4,0:4:9.03:0,9,168	0/0:42,0:42:99:0,120,2171	0/0:10,0:10:30.10:0,30,559	0/0:13,0:13:39.13:0,39,724	0/0:23,0:23:69.24:0,69,1257	0/0:14,0:14:42.14:0,42,783	1/1:1,16:19:54.17:1249,54,0	1/1:1,16:17:45.15:1109,45,0	1/1:0,3:3:9.03:222,9,0
chr10	16907037	.	T	TTTCC	2834.70	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-9.289;DP=484;FS=1.581;HRun=0;HaplotypeScore=74.8047;InbreedingCoeff=0.9914;MQ=93.34;MQ0=0;MQRankSum=-2.569;QD=72.68;ReadPosRankSum=2.511;VQSLOD=6.0604;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:54.19:0,54,1000	0/0:7,0:7:21.07:0,21,392	0/0:22,0:22:63.22:0,63,1151	0/0:21,0:21:57.19:0,57,1010	0/0:17,0:17:51.17:0,51,952	0/0:14,0:14:42.14:0,42,778	0/0:15,0:15:45.13:0,45,779	0/0:36,0:36:93.30:0,93,1672	0/0:12,0:12:27.09:0,27,498	0/0:22,0:22:66.23:0,66,1225	0/0:13,0:13:36.08:0,36,636	0/0:24,0:24:69.24:0,69,1282	0/0:16,0:16:45.15:0,45,839	0/0:15,0:15:45.15:0,45,835	0/0:18,0:18:45.14:0,45,809	1/1:0,20:20:60.21:1598,60,0	0/0:20,0:20:57.16:0,57,993	1/1:2,17:19:54.18:1358,54,0	0/0:23,0:23:63.21:0,63,1146	0/0:12,0:12:33.11:0,33,601	0/0:25,0:25:75.26:0,75,1386	0/0:15,0:15:45.15:0,45,840	0/0:14,0:14:39.13:0,39,728	0/0:9,0:9:24.08:0,24,448	0/0:9,0:9:27.08:0,27,474	0/0:18,0:18:54.14:0,54,970	0/0:23,0:23:69.22:0,69,1257	0/0:6,0:6:18.06:0,18,325
chr10	16907721	.	GA	G	2207.33	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=10.432;DP=662;FS=3.204;HRun=8;HaplotypeScore=69.5704;InbreedingCoeff=0.9955;MQ=75.67;MQ0=0;MQRankSum=0.072;QD=21.22;ReadPosRankSum=-3.454;VQSLOD=2.6834;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:84.26:0,84,1014	0/0:13,0:13:33.10:0,33,399	0/0:21,0:19:48.07:0,48,518	0/0:8,0:8:16.77:0,17,198	0/0:26,0:26:75.23:0,75,906	0/0:24,0:24:63.18:0,63,749	0/0:13,0:13:30.09:0,30,362	1/1:8,33:41:99:948,99,0	0/0:24,0:24:66.18:0,66,774	0/0:24,0:24:66.20:0,66,789	0/0:25,0:25:66.20:0,66,797	0/0:30,0:30:81.25:0,81,978	0/0:24,0:24:63.11:0,63,719	0/0:25,0:25:72.21:0,72,858	0/0:36,0:33:84.19:0,84,996	0/0:22,0:22:63.13:0,63,733	0/0:19,0:18:48.15:0,48,580	0/0:28,0:28:81.22:0,81,953	1/1:2,8:10:24.04:232,24,0	1/1:4,33:37:81.11:782,81,0	1/1:1,15:16:42.07:406,42,0	0/0:20,0:20:60.13:0,60,697	0/0:22,1:23:34.22:0,34,696	0/0:13,0:13:36.11:0,36,435	0/0:18,0:18:48.15:0,48,580	0/0:47,0:45:99:0,126,1494	0/0:35,0:32:78.16:0,78,909	0/0:8,0:8:24.07:0,24,290
chr10	16907884	.	C	CTATG	427.44	PASS	AB=0.899;AC=4;AF=0.077;AN=52;BaseQRankSum=3.964;DP=861;FS=0.000;HRun=0;HaplotypeScore=213.0455;InbreedingCoeff=0.0311;MQ=46.78;MQ0=33;MQRankSum=-1.422;QD=3.42;ReadPosRankSum=-0.271;VQSLOD=2.3232;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:42:64.67:0,65,969	0/0:12,0:11:7.35:0,7,53	./.	./.	0/0:46,0:41:19.73:0,20,197	0/0:28,0:27:54.17:0,54,928	0/0:23,0:23:27.06:0,27,440	0/0:71,0:59:63.51:0,64,1173	0/0:42,0:37:81.06:0,81,1250	0/0:37,0:34:81.91:0,82,904	0/0:16,0:14:2.35:0,2,23	0/0:45,0:44:99:0,108,1854	0/0:29,0:28:63.01:0,63,1006	0/0:34,0:33:51.17:0,51,893	0/0:32,0:26:30.20:0,30,305	0/0:37,0:36:75.10:0,75,1150	0/0:24,0:23:13.96:0,14,139	0/0:25,0:24:49.50:0,49,694	0/1:21,0:15:27.23:27,0,294	0/1:23,21:44:42.23:42,0,162	0/1:32,3:25:99:209,0,127	0/0:26,0:24:57.01:0,57,892	0/0:36,0:34:81.23:0,81,1414	0/0:32,0:31:78.14:0,78,1251	0/1:25,0:21:3.54:257,0,4	0/0:33,0:29:54.77:0,55,623	0/0:45,0:42:22.63:0,23,150	0/0:17,0:17:9.36:0,9,68
chr10	16907896	.	GTATC	G	1044	PASS	AB=0.934;AC=17;AF=0.327;AN=52;BaseQRankSum=12.538;DP=869;FS=2.342;HRun=0;HaplotypeScore=216.4199;InbreedingCoeff=0.4246;MQ=45.72;MQ0=34;MQRankSum=-0.173;QD=2.98;ReadPosRankSum=-5.975;VQSLOD=1.1658;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:46,1:44:67.46:0,67,1600	1/1:9,1:9:8.27:63,8,0	./.	./.	0/0:20,26:41:5.03:0,5,17	0/0:26,0:25:54.15:0,54,1114	0/0:25,0:25:24.06:0,24,569	0/0:69,0:58:99:0,156,2345	0/0:43,0:38:84.25:0,84,1900	0/1:38,0:35:0.11:147,0,0	1/1:19,0:17:6.28:52,6,0	0/0:45,0:44:99:0,117,2701	0/0:28,0:26:51.18:0,51,1250	0/0:34,0:32:47.92:0,48,1127	1/1:31,2:27:26.89:171,27,0	0/0:33,0:32:67.47:0,67,1463	0/1:20,2:21:53.53:74,0,54	0/0:26,0:25:41.39:0,41,837	0/1:23,0:15:4.67:5,0,690	0/1:43,0:41:10.67:11,0,450	0/1:39,0:29:99:100,0,619	0/0:23,0:21:45.14:0,45,977	0/0:40,0:38:81.22:0,81,1701	0/0:34,0:33:78.22:0,78,1667	0/1:31,0:27:5.14:5,0,69	0/1:15,23:34:99:281,0,120	1/1:14,27:38:15.28:191,15,0	1/1:9,4:13:17.14:117,17,0
chr10	16907920	.	G	GTATC	607.81	PASS	AB=1.000;AC=10;AF=0.192;AN=52;BaseQRankSum=1.842;DP=854;FS=2.774;HRun=0;HaplotypeScore=222.2657;InbreedingCoeff=0.0401;MQ=45.84;MQ0=32;MQRankSum=-1.822;QD=1.89;ReadPosRankSum=-2.141;VQSLOD=2.6108;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:50:25.20:0,25,537	0/0:8,0:8:7.71:0,8,55	./.	./.	0/0:42,0:37:3.77:0,4,27	0/0:22,0:21:27.02:0,27,343	0/0:26,0:24:6.02:0,6,91	0/1:56,0:48:0:0,0,0	0/0:42,0:37:50.98:0,51,693	0/0:31,0:29:26.92:0,27,264	0/0:23,0:21:9.41:0,9,61	0/0:46,0:45:54.13:0,54,756	0/0:17,12:27:2.87:0,3,25	0/1:32,0:30:37.32:76,0,37	0/0:30,0:26:19.38:0,19,137	0/1:37,0:36:38.96:39,0,216	0/0:25,0:24:12.83:0,13,92	0/1:28,0:27:4.59:5,0,136	0/1:25,0:19:28.94:29,0,98	1/1:37,0:35:27.09:488,27,0	0/0:50,0:41:24.94:0,25,395	0/0:24,0:22:20.91:0,21,301	0/0:36,0:34:33.08:0,33,455	0/0:31,0:30:38.80:0,39,559	0/1:24,0:28:28.99:29,0,81	0/1:36,0:32:28.03:28,0,91	0/1:38,0:35:50.48:50,0,120	0/0:15,0:14:9.87:0,10,83
chr10	16908521	.	CT	C	1958.70	PASS	AB=0.912;AC=36;AF=0.643;AN=56;BaseQRankSum=12.724;DP=624;FS=7.738;HRun=14;HaplotypeScore=105.8882;InbreedingCoeff=0.5856;MQ=68.33;MQ0=2;MQRankSum=-1.564;QD=4.52;ReadPosRankSum=6.258;VQSLOD=1.5655;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,1:40:58.91:0,59,593	1/1:13,0:13:12.08:35,12,0	0/1:18,0:11:29.61:45,0,30	0/0:14,0:10:3.32:0,3,33	1/1:18,0:18:5.09:22,5,0	0/0:23,0:23:18.93:0,19,245	0/1:18,4:22:1.67:2,0,390	1/1:10,18:29:55.26:361,55,0	0/1:25,3:28:27.48:27,0,336	1/1:25,0:25:30.40:85,30,0	1/1:7,0:7:5.60:16,6,0	0/0:32,2:34:43.76:0,44,465	0/0:23,0:23:21.65:0,22,319	0/0:23,0:24:41.95:0,42,346	1/1:28,0:28:27.51:103,28,0	1/1:9,27:37:61.33:417,61,0	1/1:29,0:29:30.53:87,31,0	1/1:4,7:11:17.81:123,18,0	1/1:9,10:18:4.58:169,5,0	1/1:13,8:22:5.88:206,6,0	1/1:10,17:27:23.62:164,24,0	0/0:21,1:22:28.35:0,28,331	0/0:10,1:11:0.56:0,1,111	0/1:24,3:27:4.96:5,0,330	1/1:2,13:15:23.77:164,24,0	1/1:20,0:20:6.98:44,7,0	1/1:28,0:28:19.03:54,19,0	1/1:10,0:10:8.38:24,8,0
chr10	16908532	.	TTTTC	T	1679.60	PASS	AB=0.976;AC=16;AF=0.286;AN=56;BaseQRankSum=15.554;DP=669;FS=6.680;HRun=0;HaplotypeScore=152.9577;InbreedingCoeff=0.8037;MQ=68.21;MQ0=3;MQRankSum=-4.310;QD=9.13;ReadPosRankSum=6.055;VQSLOD=1.9587;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:97.19:0,97,1939	1/1:10,1:11:12.73:197,13,0	0/0:23,0:14:9.95:0,10,320	0/0:14,0:8:13.76:0,14,167	0/1:19,1:20:8.70:182,0,9	0/0:22,0:22:66.04:0,66,1134	0/0:28,0:28:81.17:0,81,1562	0/0:31,0:31:93.24:0,93,1241	0/0:29,0:29:87.27:0,87,1659	1/1:31,1:32:9.87:402,10,0	1/1:8,0:8:14.39:79,14,0	0/0:34,0:34:99:0,99,1755	0/0:25,0:25:75.21:0,75,1403	0/0:25,0:25:70.42:0,70,1207	1/1:31,0:31:35.10:357,35,0	0/0:40,0:40:99:0,102,1433	1/1:25,1:26:43.26:263,43,0	0/0:12,0:12:33.05:0,33,430	0/0:23,0:22:66.12:0,66,895	0/0:31,0:31:93.06:0,93,1309	0/0:26,0:26:51.16:0,51,763	0/0:23,0:23:69.08:0,69,1211	0/0:14,0:14:42.08:0,42,695	0/0:23,0:23:69.20:0,69,1409	0/0:20,0:20:42.10:0,42,598	1/1:20,0:20:31.66:237,32,0	0/1:27,0:27:23.26:99,0,23	1/1:9,0:9:12.31:60,12,0
chr10	16908533	.	TTTC	T	4831.20	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=14.348;DP=663;FS=3.735;HRun=0;HaplotypeScore=130.5168;InbreedingCoeff=0.9891;MQ=68.31;MQ0=3;MQRankSum=-4.261;QD=27.45;ReadPosRankSum=5.852;VQSLOD=4.5874;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:96.46:0,96,1601	1/1:5,6:11:29.87:346,30,0	0/0:23,0:14:15.77:0,16,290	0/0:14,0:8:13.51:0,14,127	1/1:3,17:20:37.07:345,37,0	0/0:22,0:22:62.88:0,63,906	0/0:27,0:27:78.18:0,78,1266	0/0:33,0:33:98.70:0,99,988	0/0:30,0:30:90.20:0,90,1352	1/1:3,27:30:71.66:881,72,0	1/1:0,7:7:14.91:170,15,0	0/0:34,0:34:95.05:0,95,1439	0/0:24,0:24:71.77:0,72,1103	0/0:25,0:25:72.14:0,72,1007	1/1:12,20:32:91.33:1165,91,0	0/0:41,0:41:98.83:0,99,1032	1/1:2,23:25:45.15:666,45,0	0/0:12,0:12:33.01:0,33,315	0/0:23,0:22:61.95:0,62,620	0/0:31,0:31:89.65:0,90,967	0/0:26,0:26:48.09:0,48,533	0/0:23,0:23:65.11:0,65,937	0/0:14,0:14:40.80:0,41,532	0/0:23,0:23:69.15:0,69,1115	0/0:20,0:20:39.08:0,39,422	1/1:0,18:18:50.90:623,51,0	1/1:2,23:25:31.93:436,32,0	1/1:1,7:8:15:200,15,0
chr10	16909411	.	G	GTGTGTGTGTGTGTGTGTACATGTA	11238.97	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=-6.059;DP=729;FS=4.425;HRun=0;HaplotypeScore=348.9451;InbreedingCoeff=0.8042;MQ=58.49;MQ0=4;MQRankSum=-5.922;QD=44.78;ReadPosRankSum=-2.589;VQSLOD=2.7644;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:39.10:0,39,1711	1/1:2,2:9:3.01:337,3,0	0/0:35,0:24:54.17:0,54,1718	0/0:35,0:26:34.50:0,35,1337	1/1:1,8:27:3.01:257,3,0	0/0:18,0:18:42.14:0,42,2062	0/1:24,0:24:7.34:7,0,2674	0/0:39,0:38:96.29:0,96,3663	0/0:22,0:22:66.23:0,66,3510	1/1:3,4:25:51.15:2218,51,0	1/1:2,7:33:12.04:1010,12,0	0/0:29,0:29:84.06:0,84,4290	0/0:18,0:18:54.17:0,54,2760	0/0:23,0:23:57.16:0,57,2793	1/1:5,8:30:12.04:1081,12,0	0/0:26,0:26:69.20:0,69,3410	1/1:2,1:12:3.01:277,3,0	0/0:16,0:16:39.12:0,39,1805	0/0:21,0:20:51.14:0,51,2641	0/0:41,0:41:99:0,120,6344	0/0:40,0:40:99:0,108,4966	0/0:25,0:25:63.20:0,63,3169	0/0:32,0:32:93.30:0,93,4561	0/0:20,0:20:47.77:0,48,2186	0/0:21,0:21:57.18:0,57,2947	1/1:7,10:37:95.59:4998,96,0	1/1:5,4:38:12.93:717,13,0	1/1:1,5:15:3.01:338,3,0
chr10	16909546	.	A	ATGTGTG	1389	PASS	AB=0.933;AC=11;AF=0.196;AN=56;BaseQRankSum=5.114;DP=674;FS=1.942;HRun=0;HaplotypeScore=172.4165;InbreedingCoeff=0.4551;MQ=53.65;MQ0=21;MQRankSum=-3.750;QD=5.56;ReadPosRankSum=-5.945;VQSLOD=0.8250;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:15:11.89:0,12,85	0/0:8,0:8:11.95:0,12,94	0/0:29,0:15:14.85:0,15,179	0/0:34,0:13:11.98:0,12,145	0/1:26,0:25:16.17:16,0,163	0/0:20,0:18:36.12:0,36,726	0/0:19,0:18:33.08:0,33,612	1/1:43,0:43:42.17:438,42,0	0/0:18,0:18:20:0,20,682	0/0:30,0:30:27.99:0,28,359	0/0:26,0:26:13.71:0,14,104	0/0:28,0:27:47.72:0,48,880	0/0:15,0:15:26.87:0,27,269	0/0:24,0:24:41.47:0,41,765	0/1:27,0:26:6.01:6,0,173	0/1:10,16:33:0:0,0,0	0/1:22,0:22:11.95:12,0,320	0/1:15,1:16:6.21:522,0,6	0/1:17,0:16:0.32:73,0,0	0/1:29,0:28:0.26:1,0,0	1/1:37,0:36:50.85:468,51,0	0/0:26,0:24:19.71:0,20,412	0/0:13,0:13:21.07:0,21,399	0/0:35,0:33:43.70:0,44,1303	0/0:19,0:18:24.08:0,24,490	0/0:28,0:25:32.57:0,33,266	0/0:26,0:26:15.58:0,16,478	0/0:10,0:10:20.90:0,21,222
chr10	16909550	.	G	GTC	2862.86	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=-1.503;DP=668;FS=4.882;HRun=0;HaplotypeScore=128.4239;InbreedingCoeff=0.7879;MQ=52.96;MQ0=21;MQRankSum=-2.159;QD=18.96;ReadPosRankSum=-2.536;VQSLOD=3.2646;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:15:1.09:0,1,3	0/0:8,0:8:7.08:0,7,36	0/0:27,0:13:29.97:0,30,321	0/0:27,0:9:18.92:0,19,212	0/0:25,0:24:18.38:0,18,130	0/0:18,0:16:48.10:0,48,615	0/0:19,0:18:39.09:0,39,516	1/1:21,21:42:99:1224,107,0	0/0:18,0:18:47.38:0,47,610	0/0:29,0:29:38.64:0,39,282	0/0:25,0:25:18.90:0,19,146	0/0:26,0:25:65.26:0,65,807	0/0:16,0:16:19.87:0,20,180	0/0:26,0:26:65.73:0,66,784	0/0:26,0:25:26.89:0,27,250	0/0:32,0:32:14.85:0,15,125	0/0:21,0:21:10.59:0,11,122	0/0:16,0:16:21.75:0,22,152	1/1:15,5:19:25.08:377,25,0	1/1:16,17:32:29.72:248,30,0	1/1:37,0:36:47.42:930,47,0	0/0:26,0:24:13.71:0,14,170	0/0:13,0:13:33.05:0,33,389	0/0:37,0:35:80.25:0,80,1067	0/1:19,0:18:13.67:246,0,14	0/0:29,0:26:42.84:0,43,323	0/0:26,0:26:18.59:0,19,186	0/0:11,0:11:9.90:0,10,104
chr10	16909567	.	TGAGAGAGAGAGAGAGAGA	T	1367.06	PASS	AB=0.792;AC=11;AF=0.229;AN=48;BaseQRankSum=5.503;DP=574;FS=5.748;HRun=0;HaplotypeScore=243.0829;InbreedingCoeff=0.6729;MQ=49.89;MQ0=19;MQRankSum=-3.008;QD=11.68;ReadPosRankSum=-0.613;VQSLOD=1.9509;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:17:15.04:0,15,315	./.	./.	0/0:12,0:5:0:0,0,0	1/1:16,1:20:2.99:25,3,0	0/0:23,0:21:17.14:0,17,1058	0/0:19,0:18:3.01:0,3,179	0/0:35,0:35:14.16:0,14,337	0/0:18,0:18:18.06:0,18,1093	1/1:17,2:22:15.05:696,15,0	0/1:14,4:19:0:0,0,1	0/0:22,0:21:25.33:0,25,1323	0/0:17,0:20:16.49:0,16,2249	0/0:23,0:23:21.54:0,22,1312	./.	0/0:28,0:28:9.47:0,9,712	1/1:18,1:19:3.01:145,3,0	0/0:16,0:16:17.98:0,18,899	0/0:12,0:11:20.66:0,21,724	0/0:25,0:25:3.07:0,3,8	0/0:32,0:31:38.87:0,39,1640	0/0:27,0:25:15.51:0,16,786	0/0:12,0:12:3.01:0,3,180	0/0:42,0:38:51.11:0,51,2337	0/0:12,0:12:18.06:0,18,705	1/1:18,3:23:17.70:544,18,0	./.	1/1:8,0:10:3.01:93,3,0
chr10	16910945	.	G	GC	7631.81	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-6.543;DP=509;FS=2.993;HRun=4;HaplotypeScore=65.0648;InbreedingCoeff=0.9860;MQ=76.34;MQ0=0;MQRankSum=-3.078;QD=33.47;ReadPosRankSum=1.502;VQSLOD=5.6131;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:60.16:0,60,671	1/1:4,5:8:15.05:205,15,0	0/0:10,0:10:20.20:0,20,200	0/0:12,0:12:26.99:0,27,288	1/1:1,10:11:24.08:328,24,0	0/0:14,0:14:42.12:0,42,476	0/0:30,0:30:81.15:0,81,876	1/1:2,13:15:36.12:487,36,0	0/0:14,0:14:42.12:0,42,475	1/1:2,15:17:47.99:608,48,0	1/1:2,5:6:12.03:149,12,0	0/0:27,0:27:78.21:0,78,876	0/0:20,0:20:51.12:0,51,563	0/0:23,0:23:66.19:0,66,745	1/1:1,14:14:42.11:553,42,0	0/0:21,0:21:57.10:0,57,630	1/1:0,22:22:66.22:899,66,0	0/0:21,0:21:57.05:0,57,603	1/1:6,11:17:39.13:531,39,0	1/1:0,6:6:15.05:205,15,0	1/1:5,51:55:99:1682,126,0	0/0:18,0:18:48.13:0,48,540	0/0:7,0:7:12.01:0,12,118	0/0:24,0:24:63.14:0,63,693	0/0:18,0:18:45.11:0,45,499	1/1:1,23:24:69.19:921,69,0	1/1:2,13:15:45.15:612,45,0	1/1:0,14:14:33.11:451,33,0
chr10	16910997	.	TCCTCCTCCTCTTCCTCCCCC	T	2760.86	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=2.659;DP=545;FS=1.605;HRun=0;HaplotypeScore=307.1914;InbreedingCoeff=0.9232;MQ=68.34;MQ0=3;MQRankSum=-5.022;QD=98.60;ReadPosRankSum=1.996;VQSLOD=3.0994;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:23:57.19:0,57,4159	0/0:7,0:7:18.06:0,18,817	0/0:27,0:16:15.15:0,15,210	0/0:44,0:26:35.23:0,35,1245	0/0:14,0:13:29.58:0,30,1170	0/0:14,0:14:42.13:0,42,3021	0/0:29,0:29:81.24:0,81,4549	0/0:30,0:29:66.20:0,66,1629	0/0:14,0:14:36.11:0,36,2513	0/0:24,0:24:48.16:0,48,2199	0/0:8,0:7:15.05:0,15,806	0/0:20,0:20:48.12:0,48,2680	0/0:17,0:17:48.16:0,48,3364	0/0:20,0:20:51.15:0,51,3378	0/0:11,0:11:33.11:0,33,1536	1/1:8,12:20:57.09:2270,57,0	0/0:21,0:21:48.06:0,48,2098	1/1:2,6:8:12.04:607,12,0	0/0:17,0:17:35.69:0,36,1391	0/0:6,0:6:15.05:0,15,805	0/0:46,0:46:99:0,111,5155	0/0:20,0:20:54.17:0,54,3093	0/0:7,0:7:18.06:0,18,1381	0/0:28,0:28:12.43:0,12,4271	0/0:15,0:15:30.09:0,30,1406	0/0:23,0:23:57.16:0,57,2667	0/0:20,0:19:50.76:0,51,2645	0/0:9,0:9:12:0,12,370
chr10	16911012	.	TCC	T	933.42	PASS	AB=0.935;AC=15;AF=0.268;AN=56;BaseQRankSum=5.126;DP=540;FS=10.289;HRun=7;HaplotypeScore=134.5976;InbreedingCoeff=-0.0018;MQ=59.26;MQ0=5;MQRankSum=-5.641;QD=4.15;ReadPosRankSum=-2.622;VQSLOD=-0.6314;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:27:81.22:0,81,1294	0/1:7,1:8:6.82:7,0,62	0/0:32,0:10:14.07:0,14,159	0/0:47,0:20:32.46:0,32,388	0/0:9,2:10:19.70:0,20,107	0/0:14,0:14:42.13:0,42,696	0/0:26,0:26:69.20:0,69,1092	0/1:23,0:22:85.09:97,0,85	0/0:18,0:18:45.12:0,45,707	0/1:21,0:20:29.90:30,0,158	0/1:7,2:8:16.44:16,0,82	0/0:17,0:17:51.17:0,51,824	0/0:20,0:19:54.17:0,54,871	0/0:19,0:19:51.17:0,51,880	0/1:12,1:13:76.43:76,0,122	1/1:13,2:19:53.13:466,53,0	0/1:18,2:20:60.27:60,0,133	1/1:6,0:12:20.66:108,21,0	0/1:13,2:15:67.45:142,0,67	0/1:10,0:11:16.68:17,0,84	0/1:39,4:43:55.72:56,0,326	0/0:20,0:20:54.10:0,54,815	0/0:7,0:8:23.57:0,24,375	0/0:30,0:30:29.37:0,29,1186	0/1:13,0:14:13.55:14,0,108	0/0:22,1:22:52.30:0,52,281	0/1:16,1:16:11.60:12,0,189	0/0:2,0:2:4.48:0,4,21
chr10	16911017	.	C	CT	7995.51	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=6.481;DP=558;FS=59.590;HRun=0;HaplotypeScore=108.5030;InbreedingCoeff=0.9666;MQ=55.11;MQ0=10;MQRankSum=-5.050;QD=30.52;ReadPosRankSum=1.248;VQSLOD=0.3199;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:31:93.22:0,93,1168	1/1:1,6:7:18.03:243,18,0	0/0:35,1:9:15:0,15,154	0/0:55,0:17:35.37:0,35,362	1/1:2,9:10:21.07:309,21,0	0/0:17,0:17:51.11:0,51,642	0/0:26,0:26:75.66:0,76,962	1/1:2,19:20:50.82:580,51,0	0/0:17,0:17:45.12:0,45,579	1/1:5,20:24:59.67:767,60,0	1/1:4,6:9:21.07:303,21,0	0/0:19,0:19:57.17:0,57,761	0/0:19,0:18:54.17:0,54,737	0/0:18,0:18:54.17:0,54,737	1/1:2,10:12:35.41:452,35,0	1/1:21,0:21:24.44:291,24,0	1/1:4,16:20:42.14:611,42,0	1/1:13,0:13:6.37:100,6,0	1/1:6,9:15:42.10:552,42,0	1/1:1,9:10:24.04:309,24,0	1/1:9,33:41:84.84:1293,85,0	0/0:19,0:19:54.15:0,54,718	0/0:9,0:9:26.94:0,27,328	0/0:29,0:28:54.60:0,55,1014	1/1:1,13:14:39.12:545,39,0	1/1:4,19:22:60.13:848,60,0	1/1:1,15:16:48.16:703,48,0	1/1:0,2:2:6.02:90,6,0
chr10	16911050	.	TTCTCTC	T	6524.71	PASS	AB=0.815;AC=23;AF=0.426;AN=54;BaseQRankSum=11.410;DP=701;FS=25.463;HRun=0;HaplotypeScore=178.5714;InbreedingCoeff=0.7302;MQ=47.70;MQ0=44;MQRankSum=-11.348;QD=26.63;ReadPosRankSum=0.554;VQSLOD=3.0460;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:42:99:0,105,2405	1/1:2,2:4:8.95:144,9,0	0/0:72,0:7:5.81:0,6,87	0/0:105,0:15:14.44:0,14,143	1/1:9,8:17:20.90:314,21,0	0/0:13,0:15:24.08:0,24,637	0/0:24,0:27:54.16:0,54,1372	0/0:13,0:13:4.96:0,5,54	0/0:20,0:20:45.11:0,45,1124	1/1:10,12:22:50.76:903,51,0	1/1:6,4:9:18.02:289,18,0	0/0:21,0:24:66.20:0,66,1706	0/0:20,0:21:42.64:0,43,928	0/0:22,0:25:57.16:0,57,1365	1/1:3,11:14:42.11:807,42,0	1/1:7,17:24:51.09:1030,51,0	1/1:17,10:27:31.53:571,32,0	1/1:8,10:18:33.04:648,33,0	0/1:16,0:16:48.51:55,0,49	0/1:8,1:11:19.56:58,0,20	0/1:24,0:28:13.51:14,0,69	0/0:19,0:21:51.16:0,51,1446	0/0:12,0:13:27.06:0,27,658	0/0:28,0:30:66.16:0,66,1736	0/0:14,0:23:47.91:0,48,1025	1/1:15,14:27:57:1034,57,0	1/1:8,11:18:33.06:657,33,0	./.
chr10	16913205	.	G	GC	5931.51	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-15.130;DP=665;FS=6.941;HRun=1;HaplotypeScore=63.0454;InbreedingCoeff=0.9998;MQ=82.34;MQ0=0;MQRankSum=-1.201;QD=41.19;ReadPosRankSum=-0.187;VQSLOD=5.0271;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,120,1558	0/0:10,0:10:30.10:0,30,390	0/0:20,0:20:57.10:0,57,680	0/0:25,0:25:69.16:0,69,843	0/0:21,0:21:63.20:0,63,817	0/0:25,0:25:66.18:0,66,828	0/0:12,0:12:33.11:0,33,428	1/1:0,28:28:84.26:1219,84,0	0/0:26,0:25:78.23:0,78,985	0/0:19,0:19:57.19:0,57,740	0/0:14,0:14:39.11:0,39,490	0/0:27,0:27:78.25:0,78,1013	0/0:22,0:22:66.21:0,66,856	0/0:28,0:28:81.25:0,81,1037	0/0:27,0:27:81.26:0,81,1052	0/0:14,0:14:42.14:0,42,545	0/0:33,0:33:96.28:0,96,1229	0/0:22,0:22:60.19:0,60,779	1/1:1,18:19:57.19:853,57,0	1/1:1,17:18:48.16:719,48,0	1/1:2,50:53:99:2106,141,0	0/0:19,0:19:51.17:0,51,662	0/0:21,0:21:60.17:0,60,749	0/0:40,0:40:99:0,120,1522	1/1:2,24:26:69.23:1034,69,0	0/0:25,0:25:72.23:0,72,935	0/0:15,0:15:39.13:0,39,505	0/0:12,0:11:36.12:0,36,467
chr10	16913744	.	A	AT	7181.87	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-14.822;DP=666;FS=2.280;HRun=3;HaplotypeScore=61.3487;InbreedingCoeff=0.9996;MQ=86.44;MQ0=0;MQRankSum=-2.505;QD=38.20;ReadPosRankSum=1.015;VQSLOD=5.3228;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:84.23:0,84,995	1/1:0,8:8:24.08:335,24,0	0/0:23,0:23:60.18:0,60,720	0/0:22,0:22:60.16:0,60,706	1/1:2,29:31:81.18:1089,81,0	0/0:24,0:24:72.22:0,72,863	0/0:22,0:22:60.18:0,60,720	0/0:33,0:33:90.26:0,90,1068	0/0:26,0:26:78.24:0,78,934	1/1:1,21:22:63.21:881,63,0	1/1:0,12:12:33.11:462,33,0	0/0:25,0:25:72.22:0,72,864	0/0:27,0:27:72.22:0,72,864	0/0:27,0:27:69.21:0,69,828	1/1:2,25:27:69.23:966,69,0	0/0:28,0:28:81.24:0,81,961	1/1:2,20:22:57.19:798,57,0	0/0:18,0:18:48.15:0,48,576	0/0:21,0:21:57.16:0,57,664	0/0:21,0:21:57.16:0,57,672	0/0:35,0:35:99:0,103,1226	0/0:23,0:23:69.21:0,69,828	0/0:26,0:26:78.24:0,78,935	0/0:27,0:27:72.22:0,72,864	0/0:19,0:19:57.15:0,57,670	1/1:0,29:29:87.25:1181,87,0	1/1:1,26:27:75.25:1048,75,0	1/1:0,10:10:30.10:420,30,0
chr10	16915150	.	AC	A	1787.21	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.815;DP=756;FS=1.125;HRun=2;HaplotypeScore=71.5208;InbreedingCoeff=0.9937;MQ=89.67;MQ0=0;MQRankSum=-0.428;QD=33.72;ReadPosRankSum=1.873;VQSLOD=3.9259;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,138,2004	0/0:12,0:12:36.12:0,36,539	0/0:32,0:32:90.28:0,90,1257	0/0:26,0:26:69.20:0,69,989	0/0:24,0:24:72.24:0,72,1078	0/0:23,0:23:69.23:0,69,1033	0/0:33,0:33:99:0,99,1443	0/0:21,0:21:60.17:0,60,827	0/0:25,0:25:75.24:0,75,1103	0/0:26,0:26:75.24:0,75,1104	0/0:8,0:8:18.06:0,18,258	0/0:43,0:43:99:0,129,1891	0/0:26,0:26:78.25:0,78,1139	0/0:29,0:29:87.29:0,87,1277	0/0:29,0:29:87.28:0,87,1284	1/1:0,30:30:81.26:1052,81,0	0/0:19,0:19:57.19:0,57,854	1/1:0,23:23:66.21:857,66,0	0/0:30,0:30:90.29:0,90,1315	0/0:23,0:23:69.22:0,69,1002	0/0:57,1:58:99:0,136,2504	0/0:26,0:26:78.26:0,78,1168	0/0:25,0:25:69.22:0,69,1006	0/0:30,0:30:87.29:0,87,1303	0/0:26,0:26:75.25:0,75,1104	0/0:23,0:23:69.23:0,69,1033	0/0:32,0:32:96.29:0,96,1413	0/0:7,0:7:21.07:0,21,315
chr10	16915711	.	T	TTCCCTCG	5581.87	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-7.433;DP=766;FS=2.366;HRun=0;HaplotypeScore=189.5882;InbreedingCoeff=0.9986;MQ=90.61;MQ0=0;MQRankSum=-8.747;QD=51.68;ReadPosRankSum=-4.019;VQSLOD=4.1481;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:93.29:0,93,2136	0/0:14,0:14:36.12:0,36,852	0/0:36,0:36:69.15:0,69,1531	0/0:28,0:28:69.19:0,69,1472	0/0:29,0:29:75.26:0,75,1820	0/0:21,0:21:54.19:0,54,1308	0/0:27,0:27:69.21:0,69,1576	1/1:26,13:40:66.20:1993,66,0	0/0:14,0:14:33.11:0,33,804	0/0:38,0:38:90.31:0,90,2164	0/0:21,0:21:54.19:0,54,1308	0/0:29,0:29:75.20:0,75,1716	0/0:32,0:32:63.20:0,63,1487	0/0:28,0:28:69.24:0,69,1682	0/0:39,0:39:99:0,111,2572	0/0:35,0:35:81.26:0,81,1896	0/0:22,0:22:45.14:0,45,998	0/0:27,0:27:72.25:0,72,1720	1/1:11,3:18:30.06:807,30,0	1/1:13,18:31:54.19:2001,54,0	1/1:10,7:18:21.07:781,21,0	0/0:31,0:31:69.12:0,69,1479	0/0:30,0:30:78.25:0,78,1831	0/0:25,0:25:72.17:0,72,1570	0/0:21,0:21:54.16:0,54,1208	0/0:24,0:24:60.21:0,60,1435	0/0:29,0:29:69.22:0,69,1586	0/0:19,0:19:57.20:0,57,1383
chr10	16916279	.	AT	A	3190.36	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=11.555;DP=607;FS=5.206;HRun=8;HaplotypeScore=64.3805;InbreedingCoeff=0.9928;MQ=75.88;MQ0=0;MQRankSum=-1.527;QD=23.29;ReadPosRankSum=-1.531;VQSLOD=3.8741;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:43:99:0,111,1285	0/0:4,0:4:12.04:0,12,145	0/0:15,0:15:39.11:0,39,455	0/0:10,0:10:20.62:0,21,240	0/0:19,0:19:57.17:0,57,678	0/0:19,0:19:54.14:0,54,630	0/0:29,0:29:75.20:0,75,881	1/1:7,23:30:69.10:666,69,0	0/0:18,0:18:54.16:0,54,643	0/0:22,0:22:60.16:0,60,698	0/0:16,0:16:45.13:0,45,533	0/0:27,0:27:78.24:0,78,942	0/0:23,0:23:60.16:0,60,701	0/0:20,0:20:60.18:0,60,721	0/0:20,0:20:60.18:0,60,725	1/1:0,21:21:57.09:550,57,0	0/0:36,0:36:99:0,102,1208	1/1:4,24:28:41.88:686,42,0	1/1:1,19:20:57.09:549,57,0	1/1:2,15:17:48.08:463,48,0	1/1:3,18:21:48.07:464,48,0	0/0:18,0:18:54.17:0,54,652	0/0:11,0:11:33.10:0,33,399	0/0:23,0:22:66.16:0,66,781	0/0:22,0:22:57.17:0,57,688	0/0:34,0:34:96.29:0,96,1160	0/0:24,0:23:66.20:0,66,797	0/0:16,0:16:45.14:0,45,544
chr10	16916570	.	C	CT	3737.21	PASS	AB=0.749;AC=30;AF=0.536;AN=56;BaseQRankSum=0.873;DP=582;FS=13.102;HRun=12;HaplotypeScore=100.7502;InbreedingCoeff=0.5763;MQ=71.78;MQ0=0;MQRankSum=-2.253;QD=10.21;ReadPosRankSum=-4.845;VQSLOD=0.2500;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:77.52:0,78,569	0/1:5,7:12:24.02:102,0,24	0/0:15,0:15:13.93:0,14,91	0/1:12,0:13:0.15:0,0,30	1/1:4,12:16:27.88:255,28,0	0/0:24,1:27:41.46:0,41,458	0/0:17,0:17:41.71:0,42,303	1/1:27,0:22:16.82:104,17,0	0/0:13,0:15:28.84:0,29,203	1/1:10,20:31:35.02:489,35,0	0/1:7,7:14:18.48:153,0,18	0/0:26,0:27:61.62:0,62,443	0/0:19,0:21:29.40:0,29,276	0/0:17,0:17:44.73:0,45,328	0/1:9,24:33:56.28:480,0,56	1/1:12,0:16:7.32:104,7,0	0/1:8,13:21:7.75:256,0,8	1/1:14,0:15:21.65:111,22,0	1/1:21,0:19:20.70:115,21,0	1/1:24,0:24:36.36:200,36,0	1/1:4,0:3:2.96:19,3,0	0/0:16,1:20:13.61:0,14,245	0/1:21,0:22:5.50:5,0,281	0/0:24,0:24:47.61:0,48,343	1/1:27,0:30:51.50:250,51,0	1/1:7,18:25:7.23:382,7,0	1/1:10,20:30:15.40:453,15,0	1/1:0,10:10:27.04:263,27,0
chr10	16916656	.	GCCAGCTTCCCTCA	G	5280.90	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=11.377;DP=577;FS=12.475;HRun=0;HaplotypeScore=210.6528;InbreedingCoeff=0.9730;MQ=88.59;MQ0=0;MQRankSum=-9.433;QD=47.58;ReadPosRankSum=-0.645;VQSLOD=3.0221;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,102,6194	0/0:11,0:11:27.09:0,27,1532	0/0:28,0:28:57.20:0,57,2654	0/0:17,0:17:33.03:0,33,1168	0/0:27,0:27:75.26:0,75,4317	0/0:25,0:25:66.23:0,66,4033	0/0:20,0:20:51.16:0,51,2744	1/1:8,10:18:27:649,27,0	0/0:10,0:10:30.10:0,30,1774	0/0:25,0:25:69.24:0,69,3888	0/0:7,0:7:21.07:0,21,1284	0/0:19,0:19:57.20:0,57,3535	0/0:22,0:22:60.21:0,60,3591	0/0:18,0:18:51.18:0,51,3109	0/0:35,0:35:93.32:0,93,5792	1/1:4,8:12:18.06:688,18,0	0/0:31,0:31:87.30:0,87,5363	1/1:8,10:18:12.04:458,12,0	1/1:8,12:20:33.08:797,33,0	1/1:2,11:13:21.07:797,21,0	1/1:8,0:8:6.47:128,6,0	0/0:15,0:15:39.13:0,39,2503	0/0:19,0:19:45.15:0,45,2808	0/0:33,0:33:84.27:0,84,4820	1/1:2,20:22:48.16:1765,48,0	0/0:21,0:21:54.19:0,54,3225	0/0:26,0:25:66.23:0,66,4176	0/0:19,0:19:51.18:0,51,3127
chr10	16917666	.	CTTTGTTTTGTTTTGT	C	2895.40	PASS	AC=10;AF=0.185;AN=54;BaseQRankSum=9.012;DP=749;FS=0.000;HRun=0;HaplotypeScore=283.3629;InbreedingCoeff=0.9907;MQ=69.94;MQ0=5;MQRankSum=-7.451;QD=24.96;ReadPosRankSum=-1.011;VQSLOD=2.1909;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,105,6797	0/0:18,0:18:39.13:0,39,2575	0/0:34,0:23:21.07:0,21,979	0/0:38,0:21:23.29:0,23,960	0/0:25,0:25:54.17:0,54,3139	0/0:22,0:22:42.14:0,42,2794	0/0:27,0:29:51.18:0,51,3241	1/1:20,9:29:23.86:227,24,0	0/0:19,0:19:51.18:0,51,3464	0/0:37,0:37:69.24:0,69,4722	0/0:20,0:20:36.12:0,36,2425	0/0:29,0:29:57.20:0,57,3794	0/0:26,0:26:48.16:0,48,3041	0/0:23,0:23:54.18:0,54,3024	0/0:33,0:33:75.26:0,75,4494	1/1:13,12:25:21.54:879,22,0	0/0:45,0:45:99:0,111,6989	1/1:12,12:24:15.05:627,15,0	1/1:9,8:17:20.89:455,21,0	1/1:9,12:21:21.07:878,21,0	./.	0/0:29,0:29:66.23:0,66,4407	0/0:13,0:13:24.08:0,24,1453	0/0:25,0:25:54.16:0,54,3438	0/0:9,0:20:33.11:0,33,1859	0/0:32,0:33:72.25:0,72,4524	0/0:30,0:28:66.23:0,66,3843	0/0:18,0:18:30.07:0,30,1760
chr10	16920442	.	G	GGT	4660.55	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-8.140;DP=296;FS=5.616;HRun=0;HaplotypeScore=40.5452;InbreedingCoeff=0.9558;MQ=76.79;MQ0=0;MQRankSum=0.520;QD=41.99;ReadPosRankSum=3.233;VQSLOD=6.5338;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:48.13:0,48,666	1/1:0,5:5:15.05:274,15,0	0/0:13,0:10:23.41:0,23,330	0/0:13,0:13:26.83:0,27,378	1/1:2,9:11:21.07:383,21,0	0/0:12,0:12:33.11:0,33,497	0/0:17,0:17:51.06:0,51,680	0/0:12,0:12:27.08:0,27,388	0/0:3,0:3:9.03:0,9,136	1/1:0,7:7:21.07:384,21,0	1/1:1,4:5:9.03:165,9,0	0/0:19,0:19:57.19:0,57,862	0/0:10,0:10:30.05:0,30,374	0/0:10,0:10:30.06:0,30,428	1/1:1,15:16:42.14:764,42,0	1/1:0,8:8:15.05:274,15,0	1/1:0,12:13:30.10:548,30,0	1/1:1,17:18:39.13:699,39,0	0/0:6,0:6:9.02:0,9,117	0/0:6,0:6:18.06:0,18,272	0/0:17,0:17:48.16:0,48,725	0/0:6,0:6:18.05:0,18,253	0/0:6,0:6:18.05:0,18,251	0/0:15,0:15:45.14:0,45,660	1/1:1,8:9:18.06:325,18,0	1/1:0,9:9:24.08:404,24,0	1/1:1,4:6:12.03:219,12,0	1/1:0,4:4:12.04:220,12,0
chr10	16923760	.	C	CA	1454.44	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-8.970;DP=435;FS=2.160;HRun=3;HaplotypeScore=51.5622;InbreedingCoeff=0.9584;MQ=78.60;MQ0=0;MQRankSum=-2.179;QD=35.47;ReadPosRankSum=1.985;VQSLOD=4.2082;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:63.17:0,63,735	0/0:3,0:3:9.03:0,9,108	0/0:9,0:9:19.41:0,19,216	0/0:9,0:10:20.60:0,21,204	0/0:37,0:37:99:0,102,1210	0/0:17,0:17:51.16:0,51,612	0/0:11,0:11:33.10:0,33,396	0/0:19,0:19:51.15:0,51,603	0/0:14,0:14:36.11:0,36,431	0/0:18,0:18:54.16:0,54,639	0/0:23,0:23:66.20:0,66,792	0/0:9,0:9:27.08:0,27,324	0/0:8,0:8:24.07:0,24,288	0/0:17,0:17:42.13:0,42,504	0/0:9,0:9:24.06:0,24,277	1/1:0,9:9:21.07:294,21,0	0/0:25,0:25:69.21:0,69,828	1/1:0,12:12:36.12:504,36,0	0/0:23,0:23:60.17:0,60,708	0/0:29,0:29:84.26:0,84,1008	0/0:7,0:7:18.06:0,18,216	0/0:10,0:10:27.08:0,27,324	0/0:13,0:13:39.12:0,39,468	0/0:4,0:4:12.04:0,12,144	1/1:0,20:20:57.19:798,57,0	0/0:25,0:25:75.22:0,75,891	0/0:24,0:24:69.21:0,69,828	0/0:8,0:8:24.07:0,24,288
chr10	16924592	.	T	TATAA	2738.55	PASS	AC=22;AF=0.458;AN=48;BaseQRankSum=-6.132;DP=298;FS=2.838;HRun=0;HaplotypeScore=46.7895;InbreedingCoeff=0.7555;MQ=62.86;MQ0=3;MQRankSum=0.510;QD=25.12;ReadPosRankSum=-0.267;VQSLOD=3.1083;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:25.34:0,25,420	1/1:3,3:6:6.02:124,6,0	./.	./.	1/1:1,5:6:12.04:281,12,0	0/0:15,0:15:27.09:0,27,421	./.	0/0:49,0:48:30.08:0,30,401	0/0:7,0:7:6.02:0,6,94	1/1:5,2:10:12.03:209,12,0	1/1:2,4:6:12.04:267,12,0	0/0:7,0:7:9.03:0,9,141	0/0:7,0:7:9.03:0,9,141	0/0:2,0:2:3.01:0,3,47	1/1:4,4:8:9.03:213,9,0	1/1:6,0:6:9.03:195,9,0	1/1:11,6:17:15.05:353,15,0	1/1:5,4:10:12.04:284,12,0	0/0:15,0:14:18.06:0,18,282	0/0:7,0:7:3.01:0,3,47	0/0:4,0:4:3.01:0,3,47	./.	0/0:3,0:3:3.01:0,3,47	0/0:3,0:3:3.01:0,3,47	0/0:16,0:16:33.10:0,33,493	1/1:4,4:8:12.04:284,12,0	1/1:9,7:17:18.06:426,18,0	1/1:10,4:14:12.04:284,12,0
chr10	16925240	.	CAGA	C	8542.03	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=15.387;DP=771;FS=3.615;HRun=0;HaplotypeScore=115.5625;InbreedingCoeff=0.9720;MQ=76.73;MQ0=0;MQRankSum=-3.087;QD=41.27;ReadPosRankSum=2.624;VQSLOD=6.3730;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,138,3061	1/1:1,1:2:3.01:49,3,0	0/0:11,0:11:27.09:0,27,501	0/0:23,0:23:26.86:0,27,926	1/1:1,19:20:42.13:664,42,0	0/0:21,0:21:60.19:0,60,1297	0/0:33,0:33:90.29:0,90,1923	0/0:30,0:30:78.24:0,78,1599	0/0:29,0:29:87.30:0,87,1892	1/1:2,37:39:99:1750,108,0	1/1:0,12:12:30.06:461,30,0	0/0:44,0:44:99:0,129,2818	0/0:24,0:24:60.21:0,60,1340	0/0:26,0:26:72.25:0,72,1580	1/1:1,36:37:90.31:1470,90,0	0/0:39,0:39:99:0,114,2530	1/1:1,27:28:75.26:1214,75,0	0/0:37,0:37:99:0,102,2276	0/0:24,0:24:63.21:0,63,1344	0/0:17,0:17:51.18:0,51,1140	0/0:63,0:63:99:0,181,3989	0/0:19,0:19:51.17:0,51,1090	0/0:20,0:20:60.21:0,60,1335	0/0:39,0:39:99:0,114,2543	0/0:18,0:18:51.18:0,51,1135	1/1:0,34:34:99:1661,102,0	1/1:0,18:18:39.13:637,39,0	1/1:0,17:17:39.13:637,39,0
chr10	16925428	.	AAAG	A	797.28	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.826;DP=607;FS=0.813;HRun=0;HaplotypeScore=81.4375;InbreedingCoeff=0.9542;MQ=67.54;MQ0=1;MQRankSum=-0.800;QD=31.89;ReadPosRankSum=-0.266;VQSLOD=3.4420;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,123,2562	0/0:9,0:9:24.07:0,24,477	0/0:12,0:10:17.22:0,17,368	0/0:13,0:10:11.39:0,11,234	0/0:32,0:32:87.24:0,87,1681	0/0:25,0:24:72.23:0,72,1475	0/0:19,0:19:51.15:0,51,1043	0/0:28,0:28:59.25:0,59,1386	0/0:19,0:19:54.19:0,54,1147	0/0:21,0:21:63.19:0,63,1157	0/0:17,0:17:48.16:0,48,1033	0/0:31,0:31:87.28:0,87,1791	0/0:19,0:19:57.16:0,57,1118	0/0:21,0:21:63.17:0,63,1227	0/0:29,0:29:84.23:0,84,1628	0/0:23,0:23:66.23:0,66,1404	0/0:20,0:20:60.08:0,60,1077	0/0:16,0:16:42.14:0,42,904	0/0:20,0:20:57.17:0,57,1153	0/0:17,0:17:45.15:0,45,966	0/0:22,0:22:63.20:0,63,1316	0/0:22,0:22:60.19:0,60,1248	0/0:18,0:18:54.19:0,54,1138	0/0:25,0:25:75.24:0,75,1571	1/1:1,24:25:57.19:892,57,0	0/0:26,0:26:75.25:0,75,1468	0/0:27,0:27:81.23:0,81,1598	0/0:9,0:9:27.09:0,27,580
chr10	16926337	.	TG	T	8806.17	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=13.107;DP=841;FS=1.258;HRun=1;HaplotypeScore=83.3332;InbreedingCoeff=0.9694;MQ=72.96;MQ0=1;MQRankSum=0.031;QD=39.14;ReadPosRankSum=-3.225;VQSLOD=4.0915;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:66,0:66:99:0,196,3085	0/0:14,1:15:3.16:0,3,601	0/0:16,0:15:41.95:0,42,579	0/0:17,0:17:40.64:0,41,510	0/0:17,0:17:48.16:0,48,765	0/0:20,0:20:60.20:0,60,959	0/0:27,0:27:81.28:0,81,1293	1/1:0,43:43:99:1739,126,0	0/0:31,0:31:93.32:0,93,1482	0/0:37,0:37:99:0,111,1773	0/0:21,0:21:60.20:0,60,959	0/0:34,0:34:99:0,102,1624	0/0:25,0:25:75.24:0,75,1170	0/0:26,0:26:78.27:0,78,1247	0/0:40,0:40:99:0,120,1914	1/1:0,32:32:87.29:1217,87,0	0/0:43,0:43:99:0,129,2037	1/1:0,27:27:72.24:1005,72,0	1/1:4,37:41:99:1575,114,0	1/1:0,27:27:81.18:1089,81,0	1/1:0,38:37:99:1553,111,0	0/0:30,0:30:90.27:0,90,1407	0/0:24,0:24:72.25:0,72,1145	0/0:40,0:40:99:0,120,1912	1/1:0,17:17:45.15:630,45,0	0/0:43,0:43:99:0,129,2061	0/0:22,0:22:66.23:0,66,1055	0/0:22,0:22:66.15:0,66,971
chr10	16927180	.	TTC	T	681.76	PASS	AB=0.897;AC=13;AF=0.250;AN=52;BaseQRankSum=1.364;DP=714;FS=6.685;HRun=0;HaplotypeScore=119.6660;InbreedingCoeff=0.0490;MQ=61.89;MQ0=6;MQRankSum=2.603;QD=2.49;ReadPosRankSum=5.014;VQSLOD=1.5817;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,1:31:11.53:0,12,336	0/0:11,0:11:12.03:0,12,131	./.	./.	0/0:20,0:20:0:0,0,0	0/1:23,3:26:42.56:43,0,230	0/1:21,3:24:11.84:12,0,169	0/0:53,0:53:9.59:0,10,36	0/0:16,0:16:15.03:0,15,203	0/0:27,0:27:20.63:0,21,214	0/0:12,0:11:2.37:0,2,8	0/1:23,1:25:28.73:29,0,140	0/1:23,3:26:41.12:41,0,199	0/1:20,1:23:76.68:77,0,126	0/1:19,0:33:5.27:5,0,10	1/1:10,5:19:16.70:206,17,0	0/0:16,0:29:6:0,6,52	1/1:9,4:14:19.75:165,20,0	0/0:38,0:36:23.87:0,24,189	0/0:23,0:22:6.19:0,6,63	0/0:34,0:34:8.94:0,9,82	0/1:20,4:24:68.10:68,0,164	0/1:16,2:18:20.72:21,0,92	0/1:34,7:41:99:168,0,392	0/0:35,0:35:14.08:0,14,77	0/0:19,0:30:23.27:0,23,242	0/0:21,0:22:22.58:0,23,189	0/0:13,0:12:17.14:0,17,145
chr10	16927279	.	TC	T	1681.51	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.380;DP=647;FS=2.693;HRun=1;HaplotypeScore=73.3940;InbreedingCoeff=0.9996;MQ=82.41;MQ0=0;MQRankSum=-0.070;QD=33.63;ReadPosRankSum=1.769;VQSLOD=3.6039;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:81.24:0,81,1219	0/0:11,0:11:33.10:0,33,490	0/0:25,0:25:73.05:0,73,989	0/0:31,0:30:52.53:0,53,1097	0/0:22,0:22:62.83:0,63,985	0/0:29,0:29:87.26:0,87,1313	0/0:21,0:21:63.21:0,63,983	0/0:37,0:37:99:0,111,1666	0/0:18,0:18:54.17:0,54,821	0/0:31,0:31:90.29:0,90,1358	0/0:11,0:11:33.03:0,33,485	0/0:17,0:17:45.14:0,45,679	0/0:25,0:25:75.24:0,75,1134	0/0:21,0:21:60.68:0,61,938	0/0:29,0:29:87.25:0,87,1284	1/1:0,24:24:60.20:839,60,0	0/0:18,0:18:54.18:0,54,841	1/1:0,26:26:69.23:964,69,0	0/0:21,0:21:63.14:0,63,892	0/0:19,0:19:57.18:0,57,866	0/0:25,0:25:60.19:0,60,916	0/0:18,0:18:54.15:0,54,818	0/0:17,0:17:48.16:0,48,750	0/0:32,0:32:93.25:0,93,1363	0/0:27,0:27:78.22:0,78,1153	0/0:36,0:36:99:0,108,1689	0/0:15,0:15:45.11:0,45,676	0/0:13,0:13:36.12:0,36,563
chr10	16928328	.	GTT	G	1356.65	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=3.262;DP=622;FS=6.815;HRun=14;HaplotypeScore=85.2029;InbreedingCoeff=0.9800;MQ=69.73;MQ0=1;MQRankSum=-0.326;QD=13.99;ReadPosRankSum=-1.203;VQSLOD=2.3900;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:20:54.09:0,54,684	0/0:12,0:12:27.09:0,27,379	0/0:20,0:15:19.26:0,19,207	0/0:14,0:11:10.21:0,10,144	0/0:22,0:24:51.16:0,51,696	0/0:25,0:27:68.12:0,68,842	0/0:26,0:27:56.62:0,57,709	1/1:14,20:35:50.51:498,51,0	0/0:22,0:22:57.17:0,57,751	0/0:24,0:28:77.67:0,78,964	0/0:14,0:15:29.04:0,29,319	0/0:14,0:15:44.63:0,45,587	0/0:15,0:17:48.15:0,48,640	0/0:19,0:20:53.62:0,54,701	0/0:28,0:28:75.19:0,75,981	0/0:9,0:28:53.92:0,54,247	0/0:24,0:30:66.16:0,66,830	0/0:3,1:23:28.63:0,29,182	1/1:8,13:21:38.68:340,39,0	1/1:3,25:28:56.95:527,57,0	1/1:5,6:12:17.70:151,18,0	0/0:13,0:16:35.06:0,35,390	0/0:12,0:13:35.61:0,36,470	0/0:21,0:21:54.13:0,54,727	0/0:5,0:13:17.47:0,17,60	0/0:28,0:30:69.12:0,69,896	0/0:36,0:39:99:0,102,1352	0/0:19,0:21:50.61:0,51,643
chr10	16928537	.	G	GA	3674.37	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-11.863;DP=604;FS=4.115;HRun=8;HaplotypeScore=66.0339;InbreedingCoeff=0.9896;MQ=80.12;MQ0=0;MQRankSum=-2.499;QD=27.22;ReadPosRankSum=-2.555;VQSLOD=3.4753;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:60.01:0,60,549	0/0:6,0:6:15.01:0,15,137	0/0:18,0:18:38.96:0,39,342	0/0:13,0:14:26.83:0,27,228	0/0:18,1:19:13.39:0,13,373	0/0:31,0:31:72.01:0,72,659	0/0:24,0:24:57:0,57,521	1/1:11,29:40:87.20:968,87,0	0/0:21,0:21:57.01:0,57,515	0/0:27,0:27:75.04:0,75,687	0/0:18,0:18:42.01:0,42,383	0/0:18,0:18:45.01:0,45,412	0/0:22,0:22:63.03:0,63,577	0/0:17,0:17:45.01:0,45,407	0/0:31,0:31:87.05:0,87,796	0/0:32,0:32:87.04:0,87,796	0/0:22,0:22:53.99:0,54,484	0/0:10,0:10:20.99:0,21,192	1/1:6,17:23:54.14:612,54,0	1/1:2,22:24:63.15:712,63,0	1/1:2,31:33:84.25:969,84,0	0/0:19,0:19:51.03:0,51,466	0/0:15,0:15:39:0,39,352	0/0:15,0:15:33.01:0,33,302	1/1:2,13:15:36.11:412,36,0	0/0:25,1:26:37.41:0,37,593	0/0:27,0:26:78.02:0,78,708	0/0:12,0:12:33:0,33,296
chr10	16928685	.	CT	C	70.16	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.244;DP=594;FS=3.535;HRun=1;HaplotypeScore=108.7647;InbreedingCoeff=0.9123;MQ=62.54;MQ0=30;MQRankSum=-1.855;QD=6.38;ReadPosRankSum=-2.698;VQSLOD=-0.3531;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:53.96:0,54,832	0/0:6,0:6:15.05:0,15,239	0/0:73,0:19:21.52:0,22,474	0/0:107,0:26:26.78:0,27,398	0/0:15,0:15:24.08:0,24,370	0/0:19,0:19:48.63:0,49,739	0/0:22,0:22:57.18:0,57,858	0/0:26,0:26:75.16:0,75,1082	0/0:12,0:12:33.11:0,33,508	0/0:17,0:17:42.14:0,42,652	0/0:4,0:4:9.03:0,9,142	0/0:8,0:8:21.07:0,21,315	0/0:17,0:17:51.16:0,51,781	0/0:11,0:10:30.10:0,30,469	0/0:23,0:22:63.14:0,63,972	0/0:22,0:22:53.64:0,54,823	0/0:16,0:16:42.12:0,42,633	0/0:11,0:10:27.09:0,27,396	0/0:11,0:10:27.02:0,27,403	0/0:8,0:8:18.52:0,19,286	0/0:18,0:17:39.99:0,40,599	0/0:14,0:14:42.14:0,42,640	0/0:13,0:13:33.11:0,33,505	0/0:26,0:26:66.06:0,66,1026	1/1:1,10:10:28.61:164,29,0	0/0:21,0:21:63.17:0,63,942	0/0:17,0:17:47.49:0,47,644	0/0:15,0:15:39.02:0,39,540
chr10	16928712	.	TTC	T	2015.21	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=6.867;DP=520;FS=1.004;HRun=0;HaplotypeScore=101.1091;InbreedingCoeff=0.8877;MQ=71.54;MQ0=11;MQRankSum=1.442;QD=20.15;ReadPosRankSum=0.444;VQSLOD=3.9175;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,1:26:22.65:0,23,814	0/0:6,0:6:12.03:0,12,171	0/0:50,0:18:16.86:0,17,209	0/0:91,0:38:13.35:0,13,429	0/0:15,0:15:33.11:0,33,536	0/0:21,0:21:51.13:0,51,778	0/0:19,1:20:1.93:0,2,551	1/1:5,16:21:45.14:557,45,0	0/0:9,0:9:27.09:0,27,440	0/0:16,0:16:36.04:0,36,529	0/0:4,0:4:6.02:0,6,98	0/0:7,0:7:21.07:0,21,342	0/0:16,0:16:39.13:0,39,632	0/0:10,0:10:24.07:0,24,369	0/0:20,1:21:1.95:0,2,517	1/1:1,0:19:45.23:222,45,0	0/0:18,0:18:43.77:0,44,608	1/1:0,0:7:11.22:56,11,0	1/1:6,6:12:15.05:184,15,0	1/1:1,8:9:27.08:334,27,0	1/1:2,14:17:34.32:476,34,0	0/0:14,0:14:33.10:0,33,517	0/0:10,0:10:24.08:0,24,394	0/0:25,0:25:60.20:0,60,970	1/1:6,8:15:32.93:377,33,0	0/0:17,0:17:42.13:0,42,645	0/0:11,0:11:30.99:0,31,482	0/0:13,0:13:27.09:0,27,438
chr10	16928768	.	A	AACAC	1505.32	PASS	AB=0.859;AC=14;AF=0.292;AN=48;BaseQRankSum=-1.205;DP=498;FS=5.931;HRun=0;HaplotypeScore=127.2492;InbreedingCoeff=0.6602;MQ=60.05;MQ0=8;MQRankSum=-0.213;QD=11.85;ReadPosRankSum=-2.956;VQSLOD=2.4664;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:37:9.02:0,9,120	1/1:7,1:7:6.02:129,6,0	./.	./.	1/1:16,0:19:14.27:227,14,0	0/0:31,0:31:36.07:0,36,469	0/0:25,0:26:14.98:0,15,194	./.	0/0:14,0:14:21.07:0,21,323	0/1:13,0:13:12.42:12,0,133	0/0:11,0:11:21.06:0,21,291	0/0:5,0:13:14.48:0,14,121	0/0:11,0:12:9.02:0,9,120	0/0:16,0:15:8.99:0,9,112	1/1:11,5:22:20.54:375,21,0	0/0:16,0:23:21.02:0,21,195	0/1:17,7:28:63.18:260,0,63	0/0:6,0:11:18.02:0,18,167	./.	0/0:8,0:13:9.48:0,9,82	0/0:10,0:10:0.47:0,0,1	0/0:12,0:13:9.02:0,9,109	0/0:7,0:7:9.02:0,9,119	0/0:29,0:31:23.63:0,24,476	0/0:9,0:20:26.97:0,27,242	1/1:17,4:22:25.77:331,26,0	1/1:4,5:9:8.76:210,9,0	1/1:4,1:6:9:129,9,0
chr10	16928996	.	C	CCCA	1852.29	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=11.408;DP=453;FS=1.931;HRun=0;HaplotypeScore=86.7067;InbreedingCoeff=0.8984;MQ=76.46;MQ0=2;MQRankSum=-0.521;QD=9.36;ReadPosRankSum=-2.901;VQSLOD=2.7309;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:60.14:0,60,825	1/1:6,0:6:14.98:124,15,0	0/0:22,0:21:56.93:0,57,688	0/0:13,0:13:22.72:0,23,233	1/1:3,1:9:8.92:83,9,0	0/0:15,0:15:42.11:0,42,590	0/0:22,0:22:63.16:0,63,898	1/1:1,0:23:50:244,50,0	0/0:20,0:20:57.12:0,57,818	1/1:2,0:7:12.21:131,12,0	1/1:2,0:7:2.94:18,3,0	0/0:22,0:22:57.14:0,57,847	0/0:12,0:12:30.07:0,30,447	0/0:15,0:15:42.12:0,42,613	1/1:4,2:23:17.89:282,18,0	0/0:21,0:21:63.20:0,63,960	1/1:7,0:7:6.45:48,6,0	0/0:18,0:18:51.13:0,51,747	1/1:2,0:15:32.20:177,32,0	1/1:2,0:12:23.58:86,24,0	1/1:3,0:34:66.43:256,66,0	0/0:14,0:13:36.59:0,37,561	0/0:10,0:10:27.08:0,27,400	0/0:29,0:29:84.23:0,84,1219	1/1:0,0:15:30.42:122,30,0	1/1:5,2:18:29.99:387,30,0	1/1:5,3:14:2.99:66,3,0	1/1:1,0:6:3.01:46,3,0
chr10	16930053	.	TTTTTCTTTTC	T	5161.27	PASS	AB=0.925;AC=11;AF=0.196;AN=56;BaseQRankSum=1.919;DP=613;FS=4.622;HRun=0;HaplotypeScore=236.4907;InbreedingCoeff=-0.2411;MQ=68.29;MQ0=7;MQRankSum=-8.565;QD=20.81;ReadPosRankSum=3.415;VQSLOD=3.3115;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:75.24:0,75,2794	0/1:11,0:11:99:309,0,210	0/0:26,0:20:16.28:0,16,428	0/0:41,0:15:16.34:0,16,118	0/1:29,10:38:99:300,0,330	0/0:21,0:21:42.14:0,42,1552	0/0:18,0:18:39.07:0,39,999	0/0:24,0:24:35.84:0,36,403	0/1:15,0:15:0.26:0,0,1432	0/1:11,11:21:99:529,0,117	0/1:15,10:25:99:359,0,204	0/0:13,0:13:30.10:0,30,1235	0/0:17,0:17:33.10:0,33,1249	0/0:17,0:17:27.08:0,27,947	0/1:31,0:30:99:884,0,124	0/0:27,0:26:56.29:0,56,791	0/1:23,0:23:40.71:750,0,41	0/0:18,0:18:36.22:0,36,458	0/0:16,0:16:32.11:0,32,254	0/0:27,0:27:68.08:0,68,1011	0/0:11,0:11:5.97:0,6,58	0/0:5,0:5:9.03:0,9,360	0/0:19,0:18:36.11:0,36,1321	0/0:23,0:22:45.12:0,45,1528	0/1:24,0:24:99:776,0,166	0/1:23,0:22:99:467,0,231	0/1:26,0:26:99:672,0,209	0/1:9,0:8:99:115,0,148
chr10	16930074	.	T	TCTTC	4916.43	PASS	AB=0.954;AC=21;AF=0.375;AN=56;BaseQRankSum=10.745;DP=626;FS=6.411;HRun=0;HaplotypeScore=190.8429;InbreedingCoeff=0.7971;MQ=49.08;MQ0=40;MQRankSum=-10.187;QD=18.62;ReadPosRankSum=1.686;VQSLOD=4.1463;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:75.24:0,75,1460	1/1:7,1:8:19.83:186,20,0	0/0:21,0:8:16.28:0,16,277	0/0:48,0:8:16.43:0,16,118	1/1:19,9:30:51.35:728,51,0	0/1:22,0:21:9.51:10,0,764	0/1:17,0:17:0.55:1,0,618	0/0:33,0:23:66.64:0,67,981	0/0:15,0:15:41.35:0,41,777	1/1:25,2:23:33.32:406,33,0	1/1:22,3:26:35.17:453,35,0	0/0:14,0:14:42.14:0,42,823	0/0:18,0:18:36.11:0,36,701	0/0:17,0:17:27.08:0,27,505	1/1:21,3:24:63.63:669,64,0	0/0:25,0:24:29.71:0,30,660	0/1:21,2:24:99:339,0,107	0/0:21,0:20:50.30:0,50,612	0/0:15,0:14:35.98:0,36,467	0/0:31,0:30:62.63:0,63,988	0/0:12,0:11:9.36:0,9,176	0/0:6,0:5:15.05:0,15,306	0/0:19,0:18:35.41:0,35,711	0/0:25,0:24:51.14:0,51,911	1/1:25,0:24:68.75:813,69,0	1/1:19,3:23:58.23:565,58,0	1/1:18,1:20:47.36:509,47,0	1/1:7,2:7:17.99:238,18,0
chr10	16930078	.	CT	C	2682.35	PASS	AB=0.842;AC=20;AF=0.357;AN=56;BaseQRankSum=10.107;DP=618;FS=0.802;HRun=4;HaplotypeScore=171.7214;InbreedingCoeff=0.0804;MQ=43.52;MQ0=40;MQRankSum=-9.360;QD=7.11;ReadPosRankSum=4.698;VQSLOD=0.0802;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:69.20:0,69,930	0/1:5,4:8:22.09:113,0,22	0/0:16,0:5:12.04:0,12,165	0/1:42,0:5:2.91:5,0,3	1/1:25,6:30:6.87:245,7,0	0/1:18,4:21:50.24:50,0,459	0/0:14,1:14:9.71:0,10,336	0/0:40,1:31:29.49:0,29,617	0/0:15,0:15:43.38:0,43,574	0/1:27,2:24:45.94:169,0,46	0/1:17,9:26:32.83:233,0,33	0/0:14,0:14:41.76:0,42,503	0/0:17,0:17:33:0,33,425	0/0:18,0:18:24.08:0,24,330	1/1:12,14:25:16.28:433,16,0	0/1:25,0:24:52.86:53,0,167	0/1:15,10:24:99:302,0,102	0/1:20,0:18:7.76:8,0,64	0/1:12,1:12:36.41:36,0,46	0/1:23,8:30:24.78:25,0,217	0/0:10,0:9:13.27:0,13,157	0/0:7,0:6:16.58:0,17,180	0/0:21,0:20:33.11:0,33,462	0/0:27,0:26:42.14:0,42,579	1/1:6,20:24:64.38:549,64,0	0/1:17,8:22:31.51:235,0,32	0/1:10,8:18:12.50:298,0,13	1/1:6,3:6:11.83:108,12,0
chr10	16930079	.	T	TTTC	5624.48	PASS	AB=0.985;AC=23;AF=0.411;AN=56;BaseQRankSum=11.844;DP=620;FS=8.138;HRun=0;HaplotypeScore=180.9569;InbreedingCoeff=0.5330;MQ=43.23;MQ0=40;MQRankSum=-11.546;QD=17.20;ReadPosRankSum=2.362;VQSLOD=4.1965;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:69.20:0,69,1108	1/1:9,1:9:11.27:200,11,0	0/0:16,0:5:12.04:0,12,195	0/0:41,0:5:3.38:0,3,11	1/1:22,10:31:61.14:800,61,0	0/0:22,0:21:7.71:0,8,568	0/1:14,0:13:30.71:31,0,394	0/1:43,0:32:6.80:7,0,713	0/0:15,0:15:23.86:0,24,651	1/1:27,2:24:0.45:413,0,0	1/1:23,3:26:39.27:528,39,0	0/0:14,0:14:42.13:0,42,661	0/0:17,0:17:33.11:0,33,542	0/0:18,0:18:24.08:0,24,396	1/1:23,3:25:62.96:764,63,0	0/0:25,0:24:9.91:0,10,272	0/1:22,2:23:61.62:425,0,62	0/0:20,0:18:26.26:0,26,273	0/1:13,0:12:10.09:10,0,216	0/1:33,0:32:64.80:65,0,493	0/0:11,0:10:1.51:0,2,170	0/0:7,0:6:16.61:0,17,247	0/0:21,0:20:32.77:0,33,562	0/0:25,0:24:41.67:0,42,680	1/1:20,5:23:66.19:992,66,0	1/1:22,3:22:55.99:594,56,0	1/1:16,2:18:48.07:572,48,0	1/1:7,2:6:15.05:225,15,0
chr10	16930080	.	T	TTC	5003.36	PASS	AB=0.950;AC=22;AF=0.393;AN=56;BaseQRankSum=11.904;DP=615;FS=2.097;HRun=0;HaplotypeScore=175.0506;InbreedingCoeff=0.5935;MQ=42.76;MQ0=40;MQRankSum=-12.618;QD=16.79;ReadPosRankSum=2.317;VQSLOD=4.8218;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:69.19:0,69,987	1/1:7,3:9:26.47:227,26,0	0/0:16,0:5:12.04:0,12,178	0/0:38,0:2:1.82:0,2,5	1/1:28,5:32:48.74:787,49,0	0/0:21,0:20:3.07:0,3,505	0/1:13,0:12:15.26:15,0,358	0/0:41,0:30:52.42:0,52,731	0/0:15,0:15:44.35:0,44,630	1/1:20,8:24:1.29:431,1,0	1/1:23,4:27:49.64:519,50,0	0/0:14,0:14:42.09:0,42,565	0/0:17,0:17:33.10:0,33,472	0/0:18,0:18:24.08:0,24,354	1/1:21,4:24:65.31:633,65,0	0/1:22,0:24:20.12:20,0,253	0/1:18,6:23:99:330,0,100	0/0:18,0:18:16.31:0,16,261	0/0:13,0:12:5.31:0,5,225	0/1:33,0:32:32.25:32,0,570	0/0:11,0:10:10.95:0,11,190	0/0:7,0:6:16.57:0,17,188	0/0:22,0:21:35.54:0,36,520	0/0:25,0:24:41.84:0,42,606	1/1:25,0:23:65.46:651,65,0	1/1:17,10:24:62.13:709,62,0	1/1:13,5:18:49.97:465,50,0	1/1:8,1:6:14.91:184,15,0
chr10	16930084	.	TC	T	6093.86	PASS	AB=0.760;AC=25;AF=0.446;AN=56;BaseQRankSum=6.741;DP=597;FS=8.077;HRun=1;HaplotypeScore=156.9814;InbreedingCoeff=-0.2551;MQ=42.67;MQ0=41;MQRankSum=-8.398;QD=14.04;ReadPosRankSum=3.047;VQSLOD=4.1728;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:38:63.14:0,63,928	0/1:6,4:10:99:122,0,135	0/0:14,0:3:9.03:0,9,138	0/0:35,0:1:0.47:0,0,1	0/1:17,6:32:34.56:365,0,35	0/1:15,4:18:74.11:74,0,484	0/1:11,1:11:25.49:25,0,306	0/1:26,10:25:99:292,0,277	0/0:13,0:13:39.13:0,39,623	0/1:24,3:24:99:189,0,140	0/1:15,9:27:99:266,0,124	0/1:10,4:14:99:115,0,383	0/1:19,0:19:6.88:7,0,396	0/0:18,0:18:20.26:0,20,275	0/1:7,13:22:66.93:451,0,67	1/1:10,16:25:63.03:676,63,0	0/1:12,9:22:53.03:367,0,53	1/1:9,10:17:35.15:391,35,0	0/1:5,8:11:16.44:303,0,16	1/1:1,31:31:62.99:827,63,0	0/1:3,7:9:45.82:46,0,57	0/1:3,6:8:99:102,0,121	0/0:21,0:20:38.98:0,39,536	0/0:22,2:24:4.73:0,5,337	1/1:0,25:23:66.17:767,66,0	0/1:16,8:24:99:254,0,278	0/1:8,8:18:99:352,0,136	0/1:4,3:6:28.42:104,0,28
chr10	16930085	.	C	CTTCT	4052.95	PASS	AB=1.000;AC=43;AF=0.827;AN=52;BaseQRankSum=1.352;DP=605;FS=12.461;HRun=0;HaplotypeScore=193.4322;InbreedingCoeff=-0.0110;MQ=42.62;MQ0=41;MQRankSum=-2.468;QD=7.45;ReadPosRankSum=5.119;VQSLOD=1.6016;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:19,19:39:9.02:193,9,0	0/1:11,0:10:9.63:10,0,64	./.	./.	1/1:33,0:32:9.74:348,10,0	1/1:19,0:18:15.04:173,15,0	1/1:12,0:11:8.92:88,9,0	1/1:37,0:26:20.54:125,21,0	0/0:13,0:13:27.07:0,27,358	0/1:29,0:24:75.57:76,0,79	0/1:27,0:27:24.17:131,0,24	1/1:15,0:15:23.98:316,24,0	1/1:10,10:20:9.03:194,9,0	1/1:8,10:19:5.78:137,6,0	0/1:24,0:23:53.91:87,0,54	1/1:26,0:25:35.46:334,35,0	0/1:24,0:23:23.96:83,0,24	1/1:19,0:17:11.01:86,11,0	1/1:13,0:11:5.97:54,6,0	1/1:32,0:31:44.61:436,45,0	1/1:10,0:9:3.01:43,3,0	1/1:9,0:8:12.03:219,12,0	1/1:9,12:20:2.67:70,3,0	1/1:11,13:26:18.05:351,18,0	1/1:25,0:23:40.31:365,40,0	0/1:27,0:24:52.14:52,0,119	0/1:18,0:18:34.38:34,0,103	1/1:9,0:6:9.48:46,9,0
chr10	16930127	.	T	TC	947.48	PASS	AB=0.988;AC=25;AF=0.481;AN=52;BaseQRankSum=10.512;DP=561;FS=3.867;HRun=0;HaplotypeScore=152.1507;InbreedingCoeff=-0.4671;MQ=45.15;MQ0=18;MQRankSum=-4.292;QD=1.92;ReadPosRankSum=-6.226;VQSLOD=0.6088;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:35,0:32:1.21:1,0,437	0/1:8,0:7:4.36:4,0,21	./.	./.	1/1:34,0:32:9.99:206,10,0	0/1:12,6:16:49.03:49,0,222	0/1:12,0:10:27.63:28,0,196	0/1:30,0:20:8.28:8,0,155	0/0:18,0:18:54.10:0,54,662	0/1:27,0:24:17.81:80,0,18	0/1:24,0:24:36.02:110,0,36	0/1:16,0:16:47.55:48,0,286	0/0:19,0:19:5.68:0,6,221	0/1:20,0:19:4.30:4,0,149	0/1:22,0:21:27.90:71,0,28	0/1:27,0:26:11.75:12,0,593	0/0:25,0:23:23.42:0,23,130	0/1:22,0:19:11.72:12,0,317	0/1:12,0:11:2.18:2,0,29	1/1:29,0:27:1.89:195,2,0	0/1:7,0:6:15.27:15,0,18	0/1:11,0:10:17.45:17,0,182	0/1:15,0:13:1.39:1,0,75	0/1:37,0:35:16.36:16,0,428	0/1:24,0:21:1.85:131,0,2	0/1:31,0:28:38.54:39,0,61	0/1:24,0:24:13.91:14,0,86	0/1:8,0:7:4.40:24,0,4
chr10	16930694	.	T	TTTTG	4793.08	PASS	AB=1.000;AC=26;AF=0.464;AN=56;BaseQRankSum=0.349;DP=582;FS=21.030;HRun=0;HaplotypeScore=151.7882;InbreedingCoeff=0.7440;MQ=68.00;MQ0=5;MQRankSum=-2.080;QD=14.84;ReadPosRankSum=-1.687;VQSLOD=2.8749;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:38:92.90:0,93,999	1/1:12,0:12:10.02:145,10,0	0/0:31,0:18:50.81:0,51,480	0/0:18,0:15:44.77:0,45,376	1/1:24,0:24:43.87:448,44,0	0/1:14,0:14:15.62:16,0,231	0/0:13,0:19:32.35:0,32,268	1/1:22,0:22:59.48:528,59,0	0/0:11,0:13:20.91:0,21,264	1/1:31,0:31:67.19:642,67,0	0/1:29,0:29:6.95:253,0,7	0/0:13,0:14:24.87:0,25,356	0/0:13,0:13:33.03:0,33,476	0/0:17,0:19:53.65:0,54,699	1/1:27,0:27:24.92:355,25,0	0/0:18,0:21:53.26:0,53,729	1/1:24,0:24:14.17:207,14,0	0/0:14,0:14:26.64:0,27,396	1/1:18,0:18:51.41:451,51,0	1/1:15,0:15:20.91:198,21,0	1/1:25,0:25:42.44:383,42,0	0/0:16,0:18:50.92:0,51,591	0/0:14,0:14:35.96:0,36,363	0/0:26,0:26:62.91:0,63,755	1/1:5,16:26:26.86:589,27,0	1/1:27,0:27:27.46:330,27,0	0/1:21,0:21:6.10:208,0,6	0/1:7,0:7:6.20:40,0,6
chr10	16931329	.	CT	C	1160.23	PASS	AB=0.956;AC=22;AF=0.393;AN=56;BaseQRankSum=11.707;DP=605;FS=13.123;HRun=12;HaplotypeScore=105.2117;InbreedingCoeff=0.6761;MQ=65.85;MQ0=6;MQRankSum=-6.602;QD=4.46;ReadPosRankSum=0.747;VQSLOD=0.6708;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,1:29:38.35:0,38,516	1/1:7,0:7:5.75:35,6,0	0/1:41,0:23:18.87:19,0,140	0/0:30,0:14:10.83:0,11,125	1/1:16,0:15:29.31:178,29,0	0/1:22,2:24:4.39:4,0,323	0/0:23,0:23:54.98:0,55,543	0/0:23,0:23:7.63:0,8,80	0/0:16,0:16:25.45:0,25,324	1/1:32,0:32:27.04:246,27,0	1/1:12,0:12:14.16:84,14,0	0/0:28,1:29:36.86:0,37,541	0/0:17,0:17:20.70:0,21,305	0/0:16,2:18:18.40:0,18,341	1/1:22,0:22:37.62:219,38,0	0/0:33,0:34:61.76:0,62,773	1/1:30,0:29:2.81:150,3,0	0/1:15,2:18:1.55:2,0,334	0/0:22,0:20:11.56:0,12,90	0/0:19,0:19:2.83:0,3,7	0/0:19,0:19:9.54:0,10,45	0/0:15,0:15:30.02:0,30,293	0/0:28,1:29:40.67:0,41,558	0/0:18,1:22:27.50:0,27,417	0/1:15,0:15:0.25:0,0,20	1/1:13,0:12:20.98:110,21,0	1/1:25,1:25:36.71:254,37,0	1/1:4,0:4:8.78:53,9,0
chr10	16931340	.	TTG	T	4378.34	PASS	AB=1.000;AC=30;AF=0.536;AN=56;BaseQRankSum=13.811;DP=601;FS=10.430;HRun=0;HaplotypeScore=108.8397;InbreedingCoeff=0.8585;MQ=67.51;MQ0=12;MQRankSum=-6.992;QD=12.73;ReadPosRankSum=-5.244;VQSLOD=2.7629;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:63.14:0,63,834	1/1:6,0:6:8.73:73,9,0	0/1:58,0:24:22.20:22,0,155	0/1:40,0:16:3.93:4,0,80	1/1:18,0:17:44.53:346,45,0	0/0:18,0:18:53.15:0,53,620	0/0:21,0:21:63.08:0,63,810	1/1:18,0:18:33.50:245,34,0	0/0:14,0:14:18.58:0,19,420	1/1:26,2:28:73.78:667,74,0	1/1:12,0:11:25.96:184,26,0	0/0:24,0:24:71.53:0,72,845	0/0:17,0:17:22.42:0,22,432	0/0:19,0:19:50.35:0,50,541	1/1:25,1:26:46.95:446,47,0	0/0:33,0:33:82.68:0,83,1080	1/1:26,0:25:18.30:312,18,0	0/0:21,0:21:55.64:0,56,607	1/1:20,0:17:42.10:308,42,0	1/1:15,0:15:36.51:257,37,0	1/1:17,0:17:48.40:373,48,0	0/0:13,0:13:35.92:0,36,441	0/0:28,0:28:64.43:0,64,815	0/0:23,0:23:56.33:0,56,660	1/1:13,0:13:29.77:238,30,0	1/1:14,0:13:37.34:271,37,0	1/1:28,1:26:69.97:557,70,0	1/1:3,0:3:8.98:75,9,0
chr10	16931341	.	TG	T	5548.84	PASS	AB=0.928;AC=30;AF=0.536;AN=56;BaseQRankSum=13.466;DP=604;FS=10.433;HRun=1;HaplotypeScore=95.4304;InbreedingCoeff=0.8319;MQ=68.13;MQ0=13;MQRankSum=-6.116;QD=15.99;ReadPosRankSum=-4.787;VQSLOD=2.8135;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:54.34:0,54,626	1/1:1,5:6:8.87:98,9,0	0/1:57,5:26:36.54:37,0,135	0/1:37,3:16:21.78:22,0,48	1/1:7,10:16:44.70:468,45,0	0/0:19,0:19:52.37:0,52,505	0/0:21,0:21:63.04:0,63,633	1/1:14,3:17:38.01:266,38,0	0/0:14,0:14:11.40:0,11,305	1/1:4,24:28:80.03:843,80,0	1/1:8,5:11:26.94:258,27,0	0/0:25,0:25:70.98:0,71,659	0/0:19,0:19:12.69:0,13,329	0/0:19,0:19:42.43:0,42,372	1/1:3,23:26:47.06:565,47,0	0/0:33,1:34:47.17:0,47,812	1/1:13,13:25:29.17:456,29,0	0/0:20,0:20:51.78:0,52,467	1/1:19,1:17:49.66:364,50,0	1/1:15,0:15:38.65:287,39,0	1/1:17,0:17:50.23:405,50,0	0/0:12,0:12:35.41:0,35,322	0/0:26,0:26:65.15:0,65,620	0/0:21,1:22:54.35:0,54,510	1/1:12,0:12:29.79:238,30,0	1/1:9,6:14:38.20:355,38,0	1/1:13,16:26:71.64:768,72,0	1/1:0,3:3:9.03:119,9,0
chr10	16931351	.	TG	T	1843.02	PASS	AB=0.990;AC=28;AF=0.500;AN=56;BaseQRankSum=12.536;DP=591;FS=3.725;HRun=1;HaplotypeScore=102.0587;InbreedingCoeff=0.7444;MQ=71.09;MQ0=12;MQRankSum=-7.347;QD=6.12;ReadPosRankSum=-3.880;VQSLOD=-0.7217;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:54.05:0,54,701	1/1:5,0:5:7.75:35,8,0	0/1:59,0:25:26.51:27,0,104	0/0:40,1:16:16.22:0,16,92	1/1:20,0:19:21.87:98,22,0	0/0:22,0:22:66.13:0,66,725	0/0:26,0:26:74.73:0,75,741	1/1:3,15:18:40.81:291,41,0	0/1:13,0:13:16.46:16,0,248	1/1:23,0:23:5.39:75,5,0	1/1:12,0:10:19.97:81,20,0	0/0:26,0:26:72:0,72,715	0/0:23,0:23:31.31:0,31,522	0/0:19,0:19:41.03:0,41,368	1/1:21,1:22:15.50:86,16,0	0/0:31,0:31:38.51:0,39,783	1/1:25,1:26:34.69:156,35,0	0/0:22,0:22:63.12:0,63,689	1/1:16,1:15:26.62:249,27,0	1/1:13,0:13:35.78:276,36,0	1/1:16,0:16:45.32:347,45,0	0/0:12,0:12:34.70:0,35,323	0/0:22,0:22:59.81:0,60,629	0/0:23,0:23:63.04:0,63,684	1/1:10,0:10:23.86:191,24,0	1/1:17,0:16:10.86:73,11,0	0/1:24,1:22:1.79:50,0,2	0/1:5,0:5:1.51:4,0,2
chr10	16931359	.	TG	T	3786.08	PASS	AB=0.986;AC=22;AF=0.393;AN=56;BaseQRankSum=11.705;DP=549;FS=5.416;HRun=1;HaplotypeScore=84.1033;InbreedingCoeff=0.7574;MQ=71.52;MQ0=10;MQRankSum=-6.642;QD=14.23;ReadPosRankSum=-3.815;VQSLOD=1.6684;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:55.15:0,55,760	1/1:4,1:5:9:98,9,0	0/1:49,0:20:0.59:1,0,190	0/1:37,0:15:7.36:7,0,70	1/1:3,16:19:47.91:512,48,0	0/0:21,0:21:63.18:0,63,804	0/0:24,0:24:72.19:0,72,892	0/1:18,0:18:28.30:28,0,170	0/0:13,0:13:15.85:0,16,364	1/1:11,10:21:62.93:717,63,0	1/1:1,11:10:26.99:320,27,0	0/0:28,0:28:77.75:0,78,861	0/0:22,0:22:65.47:0,65,784	0/0:15,0:15:35.29:0,35,416	1/1:10,11:21:54.10:638,54,0	0/0:26,0:26:74.18:0,74,894	1/1:7,16:23:38.48:397,38,0	0/0:22,0:22:59.02:0,59,735	0/1:16,1:16:0.30:0,0,273	0/0:7,0:7:17.93:0,18,138	0/0:13,0:13:9.98:0,10,212	0/0:11,0:11:32.96:0,33,363	0/0:22,0:22:48.84:0,49,611	0/0:26,0:26:60.27:0,60,845	0/0:10,0:10:25.04:0,25,155	1/1:3,15:18:44.89:501,45,0	1/1:10,10:17:38.26:438,38,0	1/1:4,1:5:14.94:130,15,0
chr10	16931507	.	CTTGT	C	6192.51	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=3.799;DP=585;FS=50.605;HRun=0;HaplotypeScore=123.2835;InbreedingCoeff=0.9910;MQ=53.61;MQ0=1;MQRankSum=0.117;QD=24.87;ReadPosRankSum=1.622;VQSLOD=2.5273;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:74.70:0,75,1587	1/1:1,9:10:27.09:443,27,0	0/0:24,0:19:30.09:0,30,548	0/0:12,0:12:15.01:0,15,247	1/1:5,7:12:21.04:316,21,0	0/0:26,0:26:60.21:0,60,1413	0/0:30,0:29:69.15:0,69,1500	1/1:11,11:22:33.07:467,33,0	0/0:21,0:21:39.13:0,39,943	1/1:10,10:20:33.09:496,33,0	1/1:5,12:17:36.08:546,36,0	0/0:21,0:21:48.16:0,48,1130	0/0:24,0:24:57.16:0,57,1295	0/0:20,0:19:42.06:0,42,897	1/1:7,10:17:27.02:411,27,0	0/0:23,0:23:48.09:0,48,978	1/1:13,9:22:21.02:314,21,0	0/0:27,0:27:60.17:0,60,1324	1/1:7,10:15:32.95:425,33,0	1/1:4,7:11:21.07:345,21,0	1/1:14,17:31:48.16:776,48,0	0/0:18,0:18:45:0,45,889	0/0:12,0:12:26.44:0,26,513	0/0:40,0:40:78.23:0,78,1730	1/1:7,16:23:39.01:579,39,0	1/1:6,15:20:38.98:495,39,0	1/1:9,9:18:24.08:394,24,0	1/1:4,4:8:12.04:185,12,0
chr10	16931567	.	AG	A	11777.13	PASS	AB=0.773;AC=54;AF=0.964;AN=56;BaseQRankSum=-2.802;DP=392;FS=13.549;HRun=3;HaplotypeScore=100.1142;InbreedingCoeff=-0.0415;MQ=54.25;MQ0=0;MQRankSum=-4.508;QD=30.04;ReadPosRankSum=2.325;VQSLOD=3.4471;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,23:26:69.15:833,69,0	1/1:0,4:4:12:131,12,0	0/1:5,3:8:78.38:87,0,78	0/1:7,2:6:59.93:60,0,60	1/1:0,9:8:23.95:244,24,0	1/1:0,9:9:27.08:333,27,0	1/1:2,16:17:51.05:583,51,0	1/1:9,10:19:48.09:538,48,0	1/1:2,12:14:36.11:445,36,0	1/1:2,15:17:39.04:437,39,0	1/1:2,10:12:29.97:321,30,0	1/1:0,18:18:45.09:537,45,0	1/1:2,19:21:54.08:647,54,0	1/1:2,14:15:42.08:500,42,0	1/1:1,12:13:36.11:444,36,0	1/1:2,20:22:63.14:758,63,0	1/1:3,5:8:15.02:170,15,0	1/1:2,9:12:32.27:361,32,0	1/1:6,8:14:32.66:356,33,0	1/1:1,14:15:45.09:537,45,0	1/1:1,8:9:23.91:242,24,0	1/1:1,13:14:39.04:450,39,0	1/1:4,14:18:51.01:577,51,0	1/1:1,21:22:60.05:699,60,0	1/1:2,16:18:54.10:625,54,0	1/1:0,16:15:45.11:540,45,0	1/1:2,6:8:18.05:212,18,0	1/1:0,3:3:9.03:111,9,0
chr10	16931706	.	G	GA	194.48	PASS	AB=0.892;AC=13;AF=0.241;AN=54;BaseQRankSum=6.263;DP=366;FS=2.764;HRun=0;HaplotypeScore=80.1146;InbreedingCoeff=-0.2667;MQ=55.95;MQ0=2;MQRankSum=-2.613;QD=1.09;ReadPosRankSum=-4.148;VQSLOD=0.5718;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,1:21:33.58:0,34,456	0/0:2,0:2:6.02:0,6,78	0/0:14,0:10:35.14:0,35,435	0/0:7,0:5:13.47:0,13,169	./.	0/1:12,1:13:17.04:17,0,342	0/0:22,0:22:27.28:0,27,370	0/1:7,1:8:29.34:29,0,176	0/1:14,1:15:10.26:10,0,289	0/0:12,0:12:30.10:0,30,415	0/0:8,1:9:2.89:0,3,42	0/1:21,2:23:53.64:54,0,262	0/1:15,1:16:6.07:6,0,324	0/1:21,1:22:15.06:15,0,233	0/0:11,0:11:12.97:0,13,161	0/1:9,1:10:21.89:22,0,189	0/0:17,0:15:25.31:0,25,314	0/0:13,0:13:33.10:0,33,442	0/1:13,2:15:2.73:3,0,403	0/1:4,1:5:0:0,0,1	0/0:33,0:33:14.88:0,15,210	0/1:5,3:8:29.44:29,0,36	0/1:8,1:9:27.40:27,0,76	0/1:19,1:20:12.78:13,0,269	0/0:8,2:10:3.40:0,3,19	0/1:11,3:14:99:107,0,340	0/0:10,1:11:13.85:0,14,172	0/0:3,0:3:9.03:0,9,124
chr10	16932242	.	A	ATTGTTG	10877.76	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-5.468;DP=757;FS=7.153;HRun=0;HaplotypeScore=157.7310;InbreedingCoeff=0.9827;MQ=69.63;MQ0=0;MQRankSum=-12.107;QD=49.22;ReadPosRankSum=-3.123;VQSLOD=3.7101;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:96.27:0,96,1832	1/1:8,5:13:36.11:1005,36,0	0/0:23,0:22:7.20:0,7,298	0/0:17,0:16:14.33:0,14,241	1/1:12,20:32:65.88:1534,66,0	0/0:29,0:29:78.26:0,78,1594	0/0:26,0:26:63.22:0,63,1349	0/0:34,0:33:57.11:0,57,963	0/0:25,0:25:63.22:0,63,1314	1/1:10,15:28:69.17:1832,69,0	1/1:7,11:19:30.02:773,30,0	0/0:34,0:34:78.24:0,78,1543	0/0:21,0:21:45.15:0,45,928	0/0:19,0:19:51.15:0,51,980	1/1:7,30:37:51.17:1698,51,0	0/0:34,0:34:81.25:0,81,1612	1/1:11,7:18:20.80:699,21,0	0/0:29,0:29:66.21:0,66,1356	0/0:33,0:33:63.15:0,63,1117	0/0:23,0:23:45.15:0,45,928	0/0:28,0:28:51.14:0,51,980	0/0:33,0:33:81.24:0,81,1622	0/0:17,0:17:39.39:0,39,895	0/0:38,0:38:99:0,99,2084	0/0:29,0:29:69.20:0,69,1317	1/1:9,17:28:54.02:1295,54,0	1/1:15,16:31:44.73:1342,45,0	1/1:6,9:15:21.07:700,21,0
chr10	16932352	.	TTTTCTTTC	T	2922.09	PASS	AC=30;AF=0.600;AN=50;BaseQRankSum=12.223;DP=604;FS=2.355;HRun=0;HaplotypeScore=243.5774;InbreedingCoeff=0.8768;MQ=58.54;MQ0=1;MQRankSum=-11.873;QD=9.05;ReadPosRankSum=-0.658;VQSLOD=2.1746;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:60.11:0,60,1056	1/1:11,0:11:12.49:154,12,0	./.	./.	1/1:16,0:16:22.60:180,23,0	0/0:17,0:17:33.09:0,33,837	0/0:20,0:20:24.08:0,24,407	./.	0/0:19,0:19:24.08:0,24,876	1/1:18,0:18:17.97:198,18,0	1/1:18,0:18:26.93:261,27,0	0/0:29,0:29:33.11:0,33,904	0/0:26,0:26:33.09:0,33,780	0/0:21,0:21:45.14:0,45,1187	1/1:27,0:25:38.65:386,39,0	1/1:18,12:30:3.48:72,3,0	1/1:18,0:18:9.38:78,9,0	1/1:16,15:31:2.24:73,2,0	1/1:13,0:21:9.03:160,9,0	1/1:23,0:23:15.05:205,15,0	1/1:20,0:20:0.60:97,1,0	0/0:22,0:21:24.07:0,24,558	0/0:10,0:10:21.06:0,21,414	0/0:35,0:35:56.13:0,56,1479	1/1:19,0:19:26.95:324,27,0	1/1:26,0:26:33.07:386,33,0	1/1:29,0:29:36.04:395,36,0	1/1:16,0:16:18.18:153,18,0
chr10	16932356	.	C	CT	4143.89	PASS	AB=0.750;AC=17;AF=0.304;AN=56;BaseQRankSum=13.390;DP=560;FS=3.793;HRun=4;HaplotypeScore=154.5577;InbreedingCoeff=0.9232;MQ=54.59;MQ0=1;MQRankSum=-12.489;QD=25.74;ReadPosRankSum=0.933;VQSLOD=2.1001;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:86.89:0,87,997	0/1:6,3:9:8.94:216,0,9	0/0:17,0:11:27.03:0,27,302	0/0:11,0:7:19.87:0,20,215	1/1:9,7:16:42.89:425,43,0	0/0:15,0:15:39.12:0,39,468	0/0:19,0:19:56.95:0,57,647	0/0:12,0:12:30.09:0,30,356	0/0:19,0:19:57.17:0,57,684	1/1:7,10:17:42.05:450,42,0	1/1:11,6:17:41.07:369,41,0	0/0:29,0:29:87.27:0,87,1043	0/0:23,0:23:63.19:0,63,756	0/0:21,0:21:60.18:0,60,720	1/1:14,10:22:60.45:587,60,0	0/0:27,0:27:46.69:0,47,540	1/1:7,9:16:20.07:347,20,0	0/0:28,0:28:38.95:0,39,445	0/0:20,0:20:53.81:0,54,588	0/0:21,0:21:57.04:0,57,658	0/0:19,0:19:41.01:0,41,398	0/0:22,0:21:63.02:0,63,703	0/0:10,0:10:27.08:0,27,316	0/0:33,0:33:84.26:0,84,1006	0/0:19,0:19:47.91:0,48,530	1/1:13,10:23:65.48:625,65,0	1/1:14,12:26:73.69:743,74,0	1/1:2,11:13:36.04:382,36,0
chr10	16932357	.	TTTC	T	5408.55	PASS	AB=0.692;AC=17;AF=0.304;AN=56;BaseQRankSum=14.455;DP=557;FS=2.569;HRun=0;HaplotypeScore=169.0510;InbreedingCoeff=0.8892;MQ=54.60;MQ0=1;MQRankSum=-13.401;QD=33.80;ReadPosRankSum=0.046;VQSLOD=5.2207;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:92.33:0,92,1501	0/1:5,4:9:8.83:293,0,9	0/0:17,0:11:27.06:0,27,306	0/0:11,0:7:18.94:0,19,213	1/1:9,7:16:44.95:495,45,0	0/0:14,0:14:39.13:0,39,731	0/0:19,0:19:55.73:0,56,818	0/0:12,0:12:30.09:0,30,357	0/0:19,0:19:57.18:0,57,942	1/1:11,5:16:42.13:563,42,0	1/1:7,10:17:45.42:529,45,0	0/0:29,0:29:87.28:0,87,1360	0/0:23,0:23:63.20:0,63,1016	0/0:21,0:21:60.20:0,60,1117	1/1:12,12:22:63.08:819,63,0	0/0:27,0:27:11.04:0,11,498	1/1:13,3:16:34.87:403,35,0	0/0:28,0:28:21.53:0,22,390	0/0:20,0:20:25.34:0,25,508	0/0:21,0:21:43.53:0,44,555	0/0:19,0:19:2.72:0,3,360	0/0:22,0:21:63.20:0,63,950	0/0:10,0:10:27.09:0,27,457	0/0:33,0:33:86.77:0,87,1539	0/0:19,0:19:26.04:0,26,371	1/1:13,10:23:66.19:886,66,0	1/1:13,12:26:75.23:980,75,0	1/1:11,2:13:36.11:440,36,0
chr10	16932360	.	C	CT	3144.92	PASS	AB=0.750;AC=17;AF=0.304;AN=56;BaseQRankSum=12.750;DP=552;FS=0.000;HRun=3;HaplotypeScore=155.5622;InbreedingCoeff=0.9070;MQ=54.59;MQ0=1;MQRankSum=-13.243;QD=20.29;ReadPosRankSum=0.582;VQSLOD=2.8923;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:87.18:0,87,1010	0/1:6,3:9:23.74:127,0,24	0/0:17,0:11:21:0,21,223	0/0:11,0:7:16.65:0,17,161	1/1:8,8:16:39.53:353,40,0	0/0:14,0:14:42.13:0,42,504	0/0:20,0:20:48.01:0,48,553	0/0:10,0:10:27.08:0,27,322	0/0:21,0:21:60.16:0,60,697	1/1:7,9:16:37.04:392,37,0	1/1:12,5:17:44.43:359,44,0	0/0:31,0:31:93.27:0,93,1103	0/0:21,0:21:63.17:0,63,742	0/0:23,0:23:63.18:0,63,744	1/1:12,10:20:47.52:433,48,0	0/0:29,0:29:27.29:0,27,462	1/1:7,9:16:11.28:298,11,0	0/0:28,0:28:33.53:0,34,370	0/0:18,0:18:47.60:0,48,514	0/0:20,0:20:53.95:0,54,621	0/0:18,0:18:38.34:0,38,360	0/0:23,0:22:63:0,63,688	0/0:12,0:12:33.07:0,33,371	0/0:31,0:31:84.26:0,84,1006	0/0:17,0:17:44.77:0,45,493	1/1:10,10:20:46.86:442,47,0	1/1:15,11:26:70.35:606,70,0	1/1:2,11:13:30.37:341,30,0
chr10	16932365	.	TTTC	T	4479.14	PASS	AB=0.917;AC=20;AF=0.357;AN=56;BaseQRankSum=15.035;DP=542;FS=0.000;HRun=0;HaplotypeScore=168.9480;InbreedingCoeff=0.7371;MQ=51.13;MQ0=2;MQRankSum=-13.814;QD=21.64;ReadPosRankSum=-0.757;VQSLOD=4.4381;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:84.28:0,84,1451	0/1:4,2:8:11.96:181,0,12	0/0:14,0:9:13.89:0,14,151	0/0:10,0:6:16.25:0,16,154	1/1:10,5:17:50.39:455,50,0	0/0:17,0:17:51.17:0,51,875	0/0:17,0:17:47.37:0,47,734	0/0:9,0:9:21.06:0,21,252	0/0:21,0:21:63.20:0,63,1014	1/1:11,4:16:45.06:494,45,0	1/1:6,6:16:43.78:450,44,0	0/0:34,0:34:90.29:0,90,1396	0/0:19,0:19:54.17:0,54,907	0/0:23,0:23:69.23:0,69,1225	1/1:11,8:21:63.02:705,63,0	0/0:32,0:32:48.76:0,49,672	1/1:12,3:15:22.63:299,23,0	0/0:26,0:26:22.05:0,22,358	0/1:17,0:16:0.28:0,0,300	0/1:19,0:19:31.49:31,0,367	0/1:17,0:17:5.07:5,0,220	0/0:22,0:21:63.18:0,63,958	0/0:13,0:13:39.13:0,39,621	0/0:29,0:29:77.75:0,78,1431	0/0:17,0:17:14.25:0,14,275	1/1:11,7:21:63.05:737,63,0	1/1:13,10:25:71.93:798,72,0	1/1:11,1:13:35.97:323,36,0
chr10	16932376	.	CTTTCTTTCTTTCTTTCTTT	C	2938.34	PASS	AB=0.985;AC=15;AF=0.268;AN=56;BaseQRankSum=10.755;DP=544;FS=0.876;HRun=0;HaplotypeScore=348.6499;InbreedingCoeff=-0.2515;MQ=48.85;MQ0=2;MQRankSum=-10.385;QD=11.61;ReadPosRankSum=4.418;VQSLOD=1.4503;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,99,4799	0/1:7,0:7:6.57:7,0,37	0/0:5,0:1:2.96:0,3,19	0/0:6,0:3:6:0,6,61	0/1:20,0:20:95.02:95,0,149	0/0:20,0:20:60.21:0,60,3405	0/0:17,0:17:51.16:0,51,2076	0/1:4,0:4:16.45:21,0,16	0/0:21,0:21:63.17:0,63,3147	0/1:21,0:21:99:201,0,189	0/1:18,0:18:99:154,0,196	0/0:30,0:30:90.21:0,90,4125	0/0:18,0:18:54.17:0,54,2770	0/0:23,0:23:69.22:0,69,4344	0/1:31,0:29:99:154,0,270	0/0:30,0:30:57.15:0,57,2019	0/1:19,0:19:24.77:25,0,143	0/0:28,0:28:42.08:0,42,913	1/1:13,0:12:1.54:305,2,0	0/1:17,0:17:86.53:368,0,87	0/1:16,0:16:22.84:350,0,23	0/0:16,0:15:45.15:0,45,2498	0/0:13,0:13:39.13:0,39,2067	0/0:30,0:30:87.71:0,88,5355	0/1:19,6:25:99:840,0,116	0/1:21,0:21:99:125,0,235	0/1:29,0:27:99:264,0,245	0/1:12,0:12:56.98:183,0,57
chr10	16933091	.	GA	G	5445.89	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=11.164;DP=719;FS=0.643;HRun=8;HaplotypeScore=73.5145;InbreedingCoeff=0.9862;MQ=89.18;MQ0=0;MQRankSum=-4.192;QD=25.33;ReadPosRankSum=3.554;VQSLOD=5.5661;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:69.17:0,69,797	1/1:0,8:8:21.03:203,21,0	0/0:29,0:29:50.22:0,50,785	0/0:23,0:23:44.32:0,44,484	1/1:1,18:19:51.08:492,51,0	0/0:23,0:23:57.17:0,57,689	0/0:27,0:27:78.23:0,78,930	0/0:48,1:49:99:0,132,1585	0/0:32,0:32:81.24:0,81,967	1/1:2,30:32:90.14:869,90,0	1/1:3,22:25:57.08:550,57,0	0/0:32,0:32:87.23:0,87,1016	0/0:32,0:32:93.26:0,93,1109	0/0:25,0:25:60.18:0,60,722	1/1:3,36:39:93.15:898,93,0	0/0:3,0:26:66.37:0,66,356	1/1:4,25:29:66.10:637,66,0	0/0:0,0:14:31.63:0,32,161	0/0:13,1:14:7.19:0,7,370	0/0:25,0:25:72.22:0,72,868	0/0:40,0:40:99:0,111,1300	0/0:21,0:21:60.18:0,60,725	0/0:18,0:18:48.15:0,48,580	0/0:39,0:39:99:0,105,1268	0/0:10,0:10:30.09:0,30,362	1/1:0,18:18:54.09:521,54,0	1/1:1,23:24:69.11:666,69,0	1/1:0,21:21:63.10:608,63,0
chr10	16933350	.	ATG	A	1737.76	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=3.754;DP=470;FS=1.791;HRun=0;HaplotypeScore=74.2816;InbreedingCoeff=0.9242;MQ=66.64;MQ0=8;MQRankSum=-0.458;QD=19.97;ReadPosRankSum=-2.018;VQSLOD=3.2481;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:47.85:0,48,673	0/0:4,0:4:9.03:0,9,150	0/0:13,0:11:18.03:0,18,260	0/0:16,0:11:24.08:0,24,392	0/0:14,0:14:33.11:0,33,548	0/0:15,0:15:38.45:0,38,552	0/0:8,0:8:21.06:0,21,314	1/1:11,29:40:87.17:1008,87,0	0/0:12,0:12:33.91:0,34,424	0/0:29,0:27:77.01:0,77,1183	0/0:15,0:15:27.07:0,27,419	0/0:13,0:12:28.25:0,28,421	0/0:14,0:14:33.11:0,33,545	0/0:11,0:11:30.08:0,30,455	0/0:25,0:24:42.13:0,42,672	0/0:19,0:19:51.15:0,51,797	0/0:21,0:21:36.11:0,36,561	0/0:15,0:15:23.97:0,24,520	1/1:3,10:11:2.81:211,3,0	1/1:8,11:17:32.67:406,33,0	1/1:3,12:15:21.07:263,21,0	0/0:9,0:9:24.08:0,24,401	0/0:12,0:12:24.06:0,24,355	0/0:18,0:18:54.14:0,54,871	0/0:16,0:16:39.05:0,39,596	0/0:24,0:23:43.78:0,44,535	0/0:25,0:24:57.84:0,58,938	0/0:13,0:13:30.10:0,30,499
chr10	16933414	.	TCTCTCC	T	3556.16	PASS	AB=1.000;AC=24;AF=0.429;AN=56;BaseQRankSum=0.657;DP=417;FS=0.000;HRun=0;HaplotypeScore=114.2213;InbreedingCoeff=0.4921;MQ=57.66;MQ0=25;MQRankSum=-0.015;QD=14.11;ReadPosRankSum=2.621;VQSLOD=2.6684;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:54.05:0,54,609	1/1:3,1:3:8.98:160,9,0	0/1:6,0:2:8.89:9,0,24	0/0:16,0:5:3.45:0,3,57	0/1:18,0:17:4.17:35,0,4	0/0:13,0:12:26.54:0,27,310	0/0:12,0:9:15.93:0,16,217	0/1:20,0:19:86.31:277,0,86	0/0:13,0:12:32.56:0,33,375	1/1:19,0:18:44.99:374,45,0	1/1:2,17:18:3.01:36,3,0	0/0:14,0:12:29.75:0,30,330	0/0:7,0:6:17.60:0,18,214	0/0:8,0:8:20.92:0,21,329	1/1:7,27:32:29.84:541,30,0	0/0:17,0:17:17.89:0,18,163	1/1:2,16:17:6.02:133,6,0	0/0:21,0:20:19.80:0,20,186	0/1:12,0:12:79.45:99,0,79	0/1:15,0:15:19.19:149,0,19	1/1:14,0:14:13.32:101,13,0	0/0:9,0:8:18.02:0,18,194	0/0:7,0:6:13.83:0,14,122	0/0:9,0:9:18.86:0,19,256	0/1:12,0:13:99:135,0,123	1/1:5,23:25:67.80:773,68,0	1/1:6,13:17:36.03:644,36,0	1/1:3,9:11:5.97:92,6,0
chr10	16933418	.	TCC	T	2615.28	PASS	AB=0.857;AC=31;AF=0.554;AN=56;BaseQRankSum=1.657;DP=410;FS=10.932;HRun=4;HaplotypeScore=98.4103;InbreedingCoeff=0.7848;MQ=57.96;MQ0=24;MQRankSum=-0.560;QD=9.83;ReadPosRankSum=2.421;VQSLOD=-0.3408;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:41.37:0,41,324	1/1:4,0:3:8.96:73,9,0	0/1:4,0:2:5.72:6,0,24	0/0:18,0:6:5.68:0,6,91	0/0:4,14:17:1.73:0,2,6	0/0:13,0:12:13.40:0,13,170	0/0:12,0:9:11.82:0,12,90	1/1:13,8:20:44.79:375,45,0	0/0:13,0:12:23.44:0,23,284	1/1:6,13:18:12.41:237,12,0	1/1:19,0:18:2.25:16,2,0	0/0:13,0:12:23.67:0,24,213	0/0:8,0:7:10.91:0,11,152	0/0:7,0:7:14.90:0,15,143	1/1:33,0:31:11.78:171,12,0	1/1:0,17:17:15.05:215,15,0	1/1:17,0:16:5.90:42,6,0	1/1:2,16:17:18.06:259,18,0	1/1:3,7:10:18.30:204,18,0	1/1:16,0:16:13.74:160,14,0	1/1:15,0:15:20.95:173,21,0	0/0:9,0:8:17.64:0,18,144	0/0:7,0:6:10.65:0,11,84	0/0:8,0:9:13.32:0,13,104	1/1:11,2:13:13.56:200,14,0	1/1:26,0:24:58.64:473,59,0	1/1:20,0:17:8.51:173,9,0	1/1:12,0:11:5.96:46,6,0
chr10	16933869	.	T	TGA	10599.03	PASS	AB=0.897;AC=30;AF=0.536;AN=56;BaseQRankSum=-11.971;DP=609;FS=2.877;HRun=0;HaplotypeScore=91.3066;InbreedingCoeff=0.8373;MQ=79.59;MQ0=1;MQRankSum=-3.016;QD=31.83;ReadPosRankSum=-0.028;VQSLOD=6.8695;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,114,1623	1/1:1,6:7:12.04:218,12,0	0/0:13,0:13:35.49:0,35,388	0/0:19,0:20:37.14:0,37,395	1/1:0,21:22:44.92:762,45,0	0/0:20,0:20:48.08:0,48,664	0/0:19,0:19:52.37:0,52,698	1/1:5,19:24:57.03:821,57,0	0/0:22,0:22:57.13:0,57,805	1/1:3,16:20:45.15:788,45,0	1/1:3,13:18:24.08:436,24,0	0/0:30,0:30:78.23:0,78,1110	0/0:26,0:28:83.69:0,84,1111	0/0:20,0:21:60.12:0,60,809	1/1:0,23:23:60.21:1093,60,0	0/1:20,0:27:16.87:17,0,122	1/1:1,35:39:99:1767,99,0	0/1:17,0:17:22.90:50,0,23	1/1:2,16:19:51.08:798,51,0	1/1:1,16:17:39.01:638,39,0	1/1:10,33:43:89.77:1482,90,0	0/0:17,0:18:46.93:0,47,654	0/0:8,0:8:21.06:0,21,300	0/0:29,0:30:84.19:0,84,1194	1/1:2,1:14:8.97:79,9,0	1/1:2,14:16:41.91:611,42,0	1/1:2,17:19:48.16:873,48,0	1/1:2,4:7:9.03:164,9,0
chr10	16933870	.	G	GA	4208.18	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=11.248;DP=561;FS=14.858;HRun=0;HaplotypeScore=89.4904;InbreedingCoeff=0.9770;MQ=79.73;MQ0=1;MQRankSum=-2.587;QD=15.82;ReadPosRankSum=2.164;VQSLOD=5.1398;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,120,1560	1/1:7,0:7:11.59:79,12,0	0/0:14,0:13:30.99:0,31,332	0/0:18,0:18:39.73:0,40,391	1/1:24,0:23:27.22:278,27,0	0/0:18,0:18:48.59:0,49,613	0/0:21,0:21:55.36:0,55,672	1/1:22,0:22:32.49:379,32,0	0/0:20,0:20:57.14:0,57,756	1/1:19,0:19:44.04:311,44,0	1/1:14,0:14:23.44:159,23,0	0/0:29,0:29:81.22:0,81,1051	0/0:28,0:28:76.99:0,77,1030	0/0:20,0:20:60.06:0,60,742	1/1:23,0:23:59.34:401,59,0	0/0:21,0:21:27.63:0,28,198	1/1:36,0:36:97.89:659,98,0	0/0:11,0:11:25.10:0,25,124	1/1:18,0:18:28.70:306,29,0	1/1:16,0:16:38.53:258,39,0	1/1:33,4:37:89.21:700,89,0	0/0:18,0:18:40.60:0,41,587	0/0:7,0:7:21.06:0,21,276	0/0:28,0:28:84.13:0,84,1091	1/1:11,0:11:8.70:50,9,0	1/1:14,1:15:38.23:271,38,0	1/1:18,1:19:27.80:298,28,0	1/1:5,0:5:8.90:60,9,0
chr10	16934079	.	A	AG	5033.68	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=4.878;DP=661;FS=5.939;HRun=1;HaplotypeScore=67.5027;InbreedingCoeff=0.9999;MQ=82.37;MQ0=0;MQRankSum=-2.880;QD=41.95;ReadPosRankSum=-6.151;VQSLOD=2.3609;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,117,1505	0/0:16,0:16:45.15:0,45,584	0/0:23,0:23:59.67:0,60,716	0/0:17,0:17:39.05:0,39,449	0/0:36,0:36:99:0,108,1372	0/0:28,0:28:81.26:0,81,1052	0/0:26,0:26:75.24:0,75,974	1/1:4,38:42:99:1727,117,0	0/0:17,0:17:48.16:0,48,623	0/0:27,0:27:81.26:0,81,1039	0/0:14,0:14:42.14:0,42,545	0/0:20,0:20:60.19:0,60,779	0/0:25,0:25:75.23:0,75,959	0/0:22,0:22:66.21:0,66,854	0/0:24,0:24:69.22:0,69,896	0/0:25,0:25:72.23:0,72,935	0/0:24,0:24:69.22:0,69,896	0/0:23,0:23:66.15:0,66,808	1/1:3,23:26:75.24:1104,75,0	1/1:0,15:15:45.15:674,45,0	1/1:0,19:19:54.18:809,54,0	0/0:21,0:21:60.18:0,60,765	0/0:21,0:21:63.19:0,63,803	0/0:20,0:20:60.18:0,60,765	1/1:1,17:18:48.16:718,48,0	0/0:27,0:27:78.25:0,78,1013	0/0:33,0:32:99:0,99,1284	0/0:11,0:11:33.07:0,33,396
chr10	16934217	.	C	CA	14441.17	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-16.848;DP=732;FS=7.875;HRun=1;HaplotypeScore=67.4093;InbreedingCoeff=0.9955;MQ=90.59;MQ0=0;MQRankSum=-2.722;QD=43.50;ReadPosRankSum=1.189;VQSLOD=4.7028;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,156,2153	1/1:0,10:10:24.08:384,24,0	0/0:31,0:31:47.82:0,48,1050	0/0:25,0:25:60.20:0,60,834	1/1:0,23:23:60.20:959,60,0	0/0:26,0:26:72.24:0,72,1006	0/0:26,0:26:78.23:0,78,1049	1/1:2,34:37:99:1517,102,0	0/0:25,0:25:72.23:0,72,989	1/1:0,40:40:99:1796,117,0	1/1:0,13:13:39.13:623,39,0	0/0:30,0:30:90.30:0,90,1254	0/0:34,0:34:99:0,99,1364	0/0:19,0:19:57.19:0,57,796	1/1:1,33:34:90.31:1439,90,0	0/0:36,0:36:99:0,99,1362	1/1:1,31:32:84.29:1343,84,0	0/0:18,0:18:48.14:0,48,652	1/1:1,17:17:54.18:864,54,0	1/1:0,21:21:54.18:863,54,0	1/1:0,21:21:51.17:815,51,0	0/0:22,0:22:66.21:0,66,906	0/0:18,0:18:51.16:0,51,695	0/0:35,0:35:99:0,99,1361	1/1:0,11:11:33.11:528,33,0	1/1:0,39:39:99:1871,117,0	1/1:0,29:27:78.27:1247,78,0	1/1:0,4:4:12.04:192,12,0
chr10	16934710	.	A	AAAAAC	2458.34	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-8.717;DP=698;FS=3.391;HRun=0;HaplotypeScore=144.6065;InbreedingCoeff=0.9349;MQ=66.34;MQ0=2;MQRankSum=-0.944;QD=40.30;ReadPosRankSum=-0.818;VQSLOD=3.6859;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:60.15:0,60,990	0/0:8,0:8:18.06:0,18,295	0/0:19,0:15:5.49:0,5,262	0/0:22,0:20:23.59:0,24,344	0/0:35,0:35:66.22:0,66,1188	0/0:27,0:27:69.23:0,69,1185	0/0:26,0:26:60.20:0,60,1056	0/0:33,0:33:51.17:0,51,888	0/0:18,0:18:36.12:0,36,668	0/0:28,0:28:57.18:0,57,974	0/0:27,0:27:57.17:0,57,1008	0/0:21,0:21:54.18:0,54,965	0/0:23,0:23:39.13:0,39,707	0/0:16,0:16:42.14:0,42,743	0/0:25,0:25:63.20:0,63,1115	1/1:7,26:37:53.96:1548,54,0	0/0:22,0:22:48.16:0,48,855	1/1:9,15:24:35.88:1032,36,0	0/0:14,0:13:18.06:0,18,315	0/0:32,0:32:84.29:0,84,1517	0/0:22,0:22:42.14:0,42,722	0/0:26,0:26:54.17:0,54,974	0/0:27,0:27:63.21:0,63,1106	0/0:23,0:23:57.19:0,57,999	0/0:29,0:29:69.24:0,69,1265	0/0:40,0:40:90.29:0,90,1574	0/0:25,0:25:57.17:0,57,990	0/0:19,0:19:48.15:0,48,863
chr10	16936249	.	TC	T	2262.91	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=0.096;DP=713;FS=3.826;HRun=1;HaplotypeScore=89.2921;InbreedingCoeff=0.9994;MQ=81.47;MQ0=0;MQRankSum=-0.888;QD=32.80;ReadPosRankSum=1.172;VQSLOD=3.4524;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,156,2422	0/0:14,0:14:42.11:0,42,622	0/0:20,0:20:57.18:0,57,857	0/0:16,0:17:45.20:0,45,684	0/0:22,0:22:66.14:0,66,994	0/0:22,0:22:66.23:0,66,1050	0/0:26,0:26:75.19:0,75,1122	0/0:24,0:24:69.17:0,69,1008	0/0:35,0:35:99:0,105,1616	0/0:28,0:28:84.25:0,84,1306	0/0:17,0:17:51.11:0,51,737	0/0:34,0:34:99:0,99,1546	0/0:21,0:21:63.17:0,63,930	0/0:18,0:18:54.17:0,54,836	0/0:35,0:35:99:0,105,1649	1/1:0,30:30:75.25:1044,75,0	0/0:34,0:34:99:0,102,1567	1/1:0,39:39:96.32:1341,96,0	0/0:18,0:18:54.17:0,54,831	0/0:21,0:21:63.13:0,63,907	0/0:39,0:39:99:0,117,1752	0/0:21,0:21:63.05:0,63,912	0/0:21,0:21:63.17:0,63,974	0/0:33,0:33:99:0,99,1550	0/0:22,0:22:63.17:0,63,926	0/0:21,0:21:63.21:0,63,1001	0/0:20,0:20:57.17:0,57,859	0/0:9,0:9:27.09:0,27,430
chr10	16936542	.	C	CCA	9518.34	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=4.206;DP=702;FS=3.222;HRun=0;HaplotypeScore=114.6466;InbreedingCoeff=0.9998;MQ=85.62;MQ0=0;MQRankSum=-4.485;QD=45.76;ReadPosRankSum=3.152;VQSLOD=6.2649;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,123,1774	1/1:0,13:13:33.11:614,33,0	0/0:31,0:30:84.01:0,84,1214	0/0:27,0:26:63.16:0,63,884	1/1:1,18:20:45.13:814,45,0	0/0:11,0:11:30.10:0,30,459	0/0:19,0:19:54.16:0,54,787	0/0:31,0:31:84.23:0,84,1123	0/0:26,0:26:78.26:0,78,1194	1/1:4,19:24:66.21:1120,66,0	1/1:0,12:13:30.10:558,30,0	0/0:28,0:28:81.27:0,81,1212	0/0:21,0:21:57.18:0,57,851	0/0:26,0:26:75.25:0,75,1144	1/1:5,29:37:81.21:1477,81,0	0/0:36,0:36:97.19:0,97,1378	1/1:2,32:34:81.17:1472,81,0	0/0:31,0:31:87.76:0,88,1278	0/0:13,0:13:39.13:0,39,563	0/0:27,0:27:78.10:0,78,1109	0/0:29,0:29:77.82:0,78,1110	0/0:26,0:26:78.25:0,78,1148	0/0:15,0:15:45.15:0,45,689	0/0:25,0:25:69.21:0,69,1013	0/0:30,0:30:80.06:0,80,1233	1/1:2,23:25:72.21:1289,72,0	1/1:1,24:25:72.20:1302,72,0	1/1:0,16:17:48.16:873,48,0
chr10	16937500	.	CG	C	3058.91	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=8.539;DP=675;FS=1.371;HRun=4;HaplotypeScore=77.0521;InbreedingCoeff=0.9979;MQ=63.13;MQ0=13;MQRankSum=-2.080;QD=27.07;ReadPosRankSum=-0.185;VQSLOD=2.6258;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:46:99:0,132,1807	0/0:11,0:11:33.11:0,33,461	0/0:13,0:9:24.06:0,24,318	0/0:15,0:13:25.71:0,26,414	0/0:23,0:22:54.18:0,54,754	0/0:25,0:25:60.20:0,60,838	0/0:24,0:24:54.17:0,54,736	1/1:3,27:27:75.19:873,75,0	0/0:22,0:22:66.18:0,66,901	0/0:27,0:27:75.24:0,75,1026	0/0:9,0:9:24.08:0,24,335	0/0:25,0:25:75.23:0,75,1030	0/0:23,0:23:69.20:0,69,929	0/0:28,0:27:78.26:0,78,1089	0/0:29,0:28:78.25:0,78,1073	0/0:37,0:36:99:0,105,1438	0/0:34,0:34:93.27:0,93,1273	0/0:35,0:35:93.28:0,93,1258	1/1:3,10:11:24.05:274,24,0	1/1:2,21:21:60.18:719,60,0	1/1:3,22:24:57.17:683,57,0	0/0:21,0:21:60.16:0,60,815	0/0:24,0:23:66.21:0,66,900	0/0:35,0:34:99:0,99,1384	1/1:1,21:22:57.17:684,57,0	0/0:22,0:21:60.18:0,60,821	0/0:21,0:21:54.18:0,54,755	0/0:11,0:11:27.09:0,27,378
chr10	16937595	.	G	GAA	4221.21	PASS	AB=0.772;AC=22;AF=0.393;AN=56;BaseQRankSum=2.109;DP=726;FS=21.772;HRun=12;HaplotypeScore=99.7382;InbreedingCoeff=0.6850;MQ=58.14;MQ0=52;MQRankSum=0.121;QD=11.79;ReadPosRankSum=-0.974;VQSLOD=1.5099;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:37:76.29:0,76,607	1/1:1,9:9:24.08:336,24,0	0/0:15,0:12:1.16:0,1,93	0/0:13,0:7:8.74:0,9,70	1/1:14,7:21:22.04:430,22,0	0/0:26,0:26:68.49:0,68,606	0/0:23,0:22:47.38:0,47,459	0/0:9,0:33:64.18:0,64,290	0/0:18,0:20:35.55:0,36,363	1/1:16,12:29:54.25:692,54,0	1/1:8,17:25:34:321,34,0	0/0:21,0:21:38.74:0,39,360	0/0:28,0:22:47.91:0,48,438	0/0:18,0:18:38.85:0,39,338	0/1:11,11:20:7.25:175,0,7	1/1:9,0:31:28.16:187,28,0	1/1:11,21:32:53.45:694,53,0	0/1:18,0:28:11.03:110,0,11	0/1:7,0:21:7.95:8,0,105	0/0:8,0:20:40.35:0,40,173	0/0:9,0:9:18.54:0,19,76	0/0:23,0:24:50.66:0,51,456	0/0:24,0:23:53.41:0,53,467	0/0:31,0:28:71.79:0,72,650	0/1:23,0:32:14.16:149,0,14	1/1:11,21:31:38.23:723,38,0	1/1:10,18:26:11.52:135,12,0	1/1:6,10:16:20.56:261,21,0
chr10	16938162	.	CTT	C	5970.20	PASS	AB=0.564;AC=19;AF=0.339;AN=56;BaseQRankSum=1.894;DP=770;FS=0.635;HRun=11;HaplotypeScore=110.5689;InbreedingCoeff=0.9159;MQ=71.65;MQ0=1;MQRankSum=0.374;QD=22.70;ReadPosRankSum=4.821;VQSLOD=4.3068;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:35:98.78:0,99,1403	1/1:3,15:18:36.08:383,36,0	0/0:22,0:23:38.01:0,38,414	0/0:12,0:12:24.24:0,24,222	1/1:4,26:30:75.17:798,75,0	0/0:23,0:24:66.21:0,66,977	0/0:26,0:30:80.71:0,81,1131	0/0:12,1:27:12.27:0,12,164	0/0:26,0:26:69.18:0,69,975	1/1:5,27:32:81.18:862,81,0	1/1:2,13:17:35.78:418,36,0	0/0:35,1:38:67.36:0,67,1331	0/0:35,0:39:94.98:0,95,1317	0/0:26,0:26:72.15:0,72,983	1/1:6,33:40:80.97:900,81,0	0/0:51,0:55:99:0,155,2134	1/1:6,36:41:99:1054,99,0	0/0:21,0:24:67.66:0,68,890	0/1:5,1:22:18.13:18,0,90	0/0:4,0:22:48.91:0,49,249	0/0:4,0:30:54.90:0,55,188	0/0:14,0:14:36.04:0,36,444	0/0:17,0:20:47.13:0,47,642	0/0:39,0:42:99:0,117,1680	0/0:2,0:19:20.11:0,20,108	1/1:5,18:23:54.10:567,54,0	1/1:4,26:30:52.44:682,52,0	1/1:0,9:9:27.07:287,27,0
chr10	16938314	.	C	CG	443.03	PASS	AB=0.805;AC=2;AF=0.036;AN=56;BaseQRankSum=7.158;DP=858;FS=4.572;HRun=0;HaplotypeScore=94.8953;InbreedingCoeff=-0.0373;MQ=79.48;MQ0=0;MQRankSum=2.389;QD=6.92;ReadPosRankSum=-4.066;VQSLOD=2.5441;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,111,1533	0/0:16,0:16:48.16:0,48,671	0/1:18,9:27:99:353,0,442	0/1:31,6:35:99:179,0,682	0/0:24,0:24:72.23:0,72,990	0/0:29,0:29:87.29:0,87,1216	0/0:25,0:25:75.25:0,75,1045	0/0:33,0:33:96.31:0,96,1327	0/0:32,0:32:96.32:0,96,1340	0/0:34,0:34:99:0,102,1425	0/0:22,0:22:63.21:0,63,881	0/0:50,0:50:99:0,147,2053	0/0:27,0:27:81.25:0,81,1112	0/0:24,0:24:72.24:0,72,1006	0/0:52,0:52:99:0,150,2081	0/0:67,0:67:99:0,202,2794	0/0:38,0:38:99:0,111,1552	0/0:24,0:24:72.24:0,72,1007	0/0:25,0:25:75.23:0,75,1030	0/0:26,0:26:78.25:0,78,1072	0/0:47,0:47:99:0,138,1889	0/0:24,0:24:69.22:0,69,949	0/0:19,0:19:57.18:0,57,780	0/0:33,0:33:96.28:0,96,1321	0/0:24,0:24:72.24:0,72,1005	0/0:28,0:28:84.26:0,84,1143	0/0:25,0:24:75.25:0,75,1049	0/0:6,0:6:18.06:0,18,252
chr10	16938722	.	C	CCCA	4735.07	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=2.722;DP=474;FS=41.807;HRun=0;HaplotypeScore=72.2314;InbreedingCoeff=0.9272;MQ=68.62;MQ0=1;MQRankSum=-3.735;QD=40.47;ReadPosRankSum=0.887;VQSLOD=2.9580;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:69.20:0,69,1068	0/0:6,0:6:18.04:0,18,251	0/0:13,0:12:32.99:0,33,430	0/0:9,0:9:26.64:0,27,334	0/0:7,0:7:21.06:0,21,324	0/0:17,0:17:48.12:0,48,760	0/0:20,0:20:60.13:0,60,869	1/1:3,17:22:55.24:875,55,0	0/0:14,0:14:39.12:0,39,622	0/0:15,0:15:33.47:0,33,490	0/0:7,0:7:21.01:0,21,278	0/0:27,0:27:72.23:0,72,1141	0/0:18,0:18:54.16:0,54,841	0/0:17,0:17:48.13:0,48,723	0/0:30,0:30:87.26:0,87,1345	0/0:24,0:24:2:0,2,120	0/0:17,0:17:51.16:0,51,812	0/0:17,0:17:7.92:0,8,78	1/1:3,15:17:33.73:709,34,0	1/1:0,5:5:15.05:291,15,0	1/1:3,47:53:87.29:1856,87,0	0/0:7,0:7:18.04:0,18,251	0/0:8,0:8:20.85:0,21,314	0/0:21,0:20:56.32:0,56,918	1/1:1,17:19:48.16:1005,48,0	0/0:19,0:19:57.06:0,57,840	0/0:10,0:10:30.09:0,30,473	0/0:7,0:7:21.07:0,21,348
chr10	16938979	.	CCA	C	7910.17	PASS	AB=0.529;AC=31;AF=0.554;AN=56;BaseQRankSum=11.204;DP=418;FS=1.019;HRun=0;HaplotypeScore=55.2087;InbreedingCoeff=0.8915;MQ=98.44;MQ0=3;MQRankSum=-3.060;QD=34.10;ReadPosRankSum=2.292;VQSLOD=6.9596;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:69.24:0,69,1223	1/1:0,4:4:12.04:164,12,0	0/0:20,0:20:43.32:0,43,702	0/0:30,0:29:31.62:0,32,828	1/1:1,0:1:3:26,3,0	0/0:11,0:11:33.11:0,33,586	0/0:17,0:17:45.15:0,45,798	1/1:3,18:21:54.18:741,54,0	0/0:11,0:11:33.11:0,33,575	1/1:1,15:16:36.10:476,36,0	1/1:0,8:8:15.05:206,15,0	0/0:12,0:12:36.12:0,36,629	0/0:14,0:14:42.14:0,42,735	0/0:15,0:15:45.14:0,45,760	1/1:4,27:30:78.26:1072,78,0	1/1:0,20:20:54.18:742,54,0	1/1:4,20:24:57.19:783,57,0	1/1:0,18:17:51.17:701,51,0	1/1:0,15:15:42.14:577,42,0	1/1:0,6:6:15.05:201,15,0	1/1:5,28:33:72.24:989,72,0	0/0:6,0:6:18.06:0,18,319	0/0:8,0:8:24.08:0,24,426	0/0:16,0:16:48.16:0,48,841	1/1:0,10:10:27.09:371,27,0	0/1:1,8:9:26.19:284,0,26	1/1:0,11:10:27.09:371,27,0	1/1:0,5:5:15.05:206,15,0
chr10	16939156	.	GCGAGCAAAGC	G	6222.37	PASS	AC=30;AF=0.556;AN=54;BaseQRankSum=9.826;DP=218;FS=28.413;HRun=0;HaplotypeScore=76.5245;InbreedingCoeff=0.8838;MQ=90.64;MQ0=0;MQRankSum=-9.700;QD=58.70;ReadPosRankSum=-0.136;VQSLOD=2.6223;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:51.17:0,51,2487	1/1:0,1:1:3.01:94,3,0	0/0:12,0:12:25.91:0,26,1121	0/0:10,0:10:11.05:0,11,587	1/1:0,1:1:3.01:94,3,0	0/0:10,0:10:27.09:0,27,1368	0/0:11,0:11:30.10:0,30,1465	1/1:8,5:13:15.05:468,15,0	0/0:5,0:5:15.05:0,15,768	1/1:0,6:6:18.05:495,18,0	1/1:0,4:4:8.96:205,9,0	0/0:4,0:4:12.04:0,12,615	0/0:12,0:12:36.12:0,36,1808	0/0:8,0:8:24.08:0,24,1227	1/1:2,7:9:21.07:641,21,0	1/1:0,7:7:21.07:656,21,0	1/1:1,9:10:24.08:750,24,0	1/1:1,6:7:15.05:468,15,0	1/1:3,5:8:15.02:396,15,0	1/1:0,3:3:9.03:270,9,0	1/1:4,14:18:9.03:281,9,0	0/0:7,0:7:21.07:0,21,1069	0/0:4,0:4:9.03:0,9,459	0/0:11,0:11:33.11:0,33,1577	1/1:0,5:5:9.03:281,9,0	1/1:0,6:6:18.06:562,18,0	1/1:1,7:8:18.06:562,18,0	./.
chr10	16939444	.	C	CGT	17711.76	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-16.839;DP=673;FS=19.888;HRun=0;HaplotypeScore=74.4002;InbreedingCoeff=0.9902;MQ=79.60;MQ0=0;MQRankSum=-2.031;QD=54.16;ReadPosRankSum=0.881;VQSLOD=3.6683;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,99,1562	1/1:0,9:9:21.07:426,21,0	0/0:18,0:17:42.10:0,42,617	0/0:17,0:17:37.82:0,38,546	1/1:0,7:7:18.06:365,18,0	0/0:25,0:25:75.26:0,75,1224	0/0:33,0:33:99:0,99,1591	1/1:4,37:42:99:2366,120,0	0/0:26,0:26:78.27:0,78,1272	1/1:0,18:18:54.19:1096,54,0	1/1:0,10:11:30.10:598,30,0	0/0:36,0:36:99:0,108,1731	0/0:25,0:25:72.23:0,72,1151	0/0:21,0:21:63.22:0,63,1025	1/1:0,40:40:99:2255,111,0	0/0:40,0:40:99:0,114,1836	1/1:0,23:25:63.22:1279,63,0	0/0:25,0:25:72.24:0,72,1175	1/1:1,17:19:57.15:1059,57,0	1/1:2,12:14:36.12:695,36,0	1/1:0,57:59:99:3229,160,0	0/0:10,0:10:30.10:0,30,489	0/0:13,0:13:36.12:0,36,587	0/0:22,0:22:63.17:0,63,996	1/1:0,18:18:44.84:914,45,0	1/1:2,22:23:66.23:1316,66,0	1/1:6,29:35:96.33:1932,96,0	1/1:0,5:5:9.03:183,9,0
chr10	16939692	.	AAAG	A	2431.46	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=8.781;DP=563;FS=20.422;HRun=0;HaplotypeScore=80.1490;InbreedingCoeff=0.9957;MQ=70.15;MQ0=3;MQRankSum=-4.900;QD=31.99;ReadPosRankSum=-2.689;VQSLOD=1.2637;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,108,2172	0/0:14,0:14:36.08:0,36,680	0/0:19,0:18:54.08:0,54,922	0/0:13,0:12:27.49:0,27,416	0/0:14,0:14:39.11:0,39,781	0/0:21,0:21:57.18:0,57,1199	0/0:25,0:25:75.20:0,75,1409	1/1:6,27:29:81.05:1092,81,0	0/0:14,0:14:36.08:0,36,680	0/0:21,0:20:57.16:0,57,1136	0/0:12,0:12:36.12:0,36,732	0/0:18,0:18:51.17:0,51,1073	0/0:15,0:15:42.09:0,42,746	0/0:18,0:18:54.14:0,54,1003	0/0:24,0:24:72.25:0,72,1445	0/0:20,0:20:60.16:0,60,1133	0/0:30,0:30:87.29:0,87,1755	0/0:28,0:28:81.26:0,81,1594	1/1:5,11:16:20.31:540,20,0	1/1:2,11:13:27.06:411,27,0	1/1:0,14:14:36.08:548,36,0	0/0:19,0:19:57.18:0,57,1137	0/0:31,0:31:90.29:0,90,1785	0/0:13,0:12:39.13:0,39,820	0/0:25,0:25:72.23:0,72,1463	0/0:24,0:24:69.20:0,69,1286	0/0:25,0:25:75.22:0,75,1406	0/0:6,0:6:18.02:0,18,335
chr10	16939842	.	A	ACCC	2637.19	PASS	AB=0.947;AC=19;AF=0.339;AN=56;BaseQRankSum=-5.313;DP=585;FS=3.056;HRun=7;HaplotypeScore=101.3806;InbreedingCoeff=0.8702;MQ=74.56;MQ0=0;MQRankSum=-0.843;QD=15.16;ReadPosRankSum=-2.051;VQSLOD=-0.0949;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,102,1357	1/1:1,0:1:3.01:62,3,0	0/0:18,0:18:37.49:0,37,443	0/0:13,0:13:9.40:0,9,240	1/1:3,5:9:8.94:102,9,0	0/0:20,0:20:48.13:0,48,639	0/0:22,0:22:63.13:0,63,806	0/0:31,1:32:38.06:0,38,222	0/0:13,0:13:24.04:0,24,311	1/1:10,8:20:21.47:242,21,0	1/1:11,2:14:18.46:242,18,0	0/0:23,0:23:57.12:0,57,753	0/0:19,0:19:54.15:0,54,719	0/0:21,0:21:54.14:0,54,718	1/1:8,12:23:30.08:549,30,0	0/0:2,0:26:61.78:0,62,376	1/1:6,25:35:38.77:729,39,0	0/0:1,0:27:73.46:0,73,444	0/1:17,0:18:4.87:5,0,99	0/0:14,0:14:29.36:0,29,136	0/0:39,0:39:70.57:0,71,352	0/0:10,0:10:30.10:0,30,409	0/0:17,0:17:39.09:0,39,515	0/0:36,0:36:93.20:0,93,1210	0/0:21,0:21:48.13:0,48,635	1/1:6,14:22:44.96:593,45,0	1/1:11,10:22:12.04:230,12,0	1/1:2,6:9:6:85,6,0
chr10	16939849	.	C	CG	2612.14	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-9.083;DP=539;FS=13.640;HRun=1;HaplotypeScore=76.4665;InbreedingCoeff=0.8413;MQ=71.57;MQ0=0;MQRankSum=0.402;QD=28.70;ReadPosRankSum=0.223;VQSLOD=2.1010;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,117,1433	0/0:2,0:2:2.75:0,3,20	0/0:16,0:15:36.66:0,37,420	0/0:16,0:16:13.24:0,13,345	0/0:8,0:8:5.02:0,5,20	0/0:18,0:18:54.12:0,54,667	0/0:25,0:25:63.12:0,63,767	1/1:4,17:27:53.88:613,54,0	0/0:12,0:12:32.96:0,33,359	0/0:14,0:14:20.32:0,20,111	0/0:9,0:9:13.46:0,13,70	0/0:23,0:23:65.86:0,66,765	0/0:21,0:21:60.17:0,60,740	0/0:22,0:22:63.16:0,63,748	0/0:15,0:15:28.21:0,28,127	0/0:27,0:27:69.26:0,69,382	0/0:33,0:33:34.24:0,34,126	0/0:32,0:32:83.81:0,84,469	1/1:2,18:20:50.02:590,50,0	1/1:1,13:15:33.06:449,33,0	1/1:2,27:29:78.26:1119,78,0	0/0:10,0:10:30.09:0,30,380	0/0:19,0:19:50.98:0,51,569	0/0:32,0:32:96.26:0,96,1205	0/0:21,0:21:60.05:0,60,689	0/0:15,0:15:28.99:0,29,137	0/0:12,0:12:3.86:0,4,65	0/0:6,0:6:4.44:0,4,14
chr10	16941518	.	A	AT	2625.61	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=-12.252;DP=630;FS=10.682;HRun=9;HaplotypeScore=66.8678;InbreedingCoeff=0.8664;MQ=74.92;MQ0=0;MQRankSum=-0.054;QD=20.35;ReadPosRankSum=-3.914;VQSLOD=2.0024;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:59.98:0,60,521	0/0:9,0:9:20.98:0,21,182	0/1:22,0:21:3.23:3,0,186	0/0:13,0:12:4.07:0,4,118	0/0:31,0:31:71.94:0,72,621	0/0:32,0:32:86.94:0,87,748	0/0:19,0:19:41.87:0,42,344	1/1:8,45:53:99:1440,132,0	0/0:17,1:18:14.77:0,15,351	0/0:27,0:27:68.43:0,68,573	0/0:14,0:14:35.96:0,36,304	0/0:25,0:25:68.94:0,69,589	0/0:21,0:21:50.98:0,51,442	0/0:19,0:19:53.98:0,54,466	0/0:35,0:35:58.39:0,58,701	0/0:2,0:33:55:0,55,162	0/0:21,0:20:56.99:0,57,495	0/0:2,0:26:42.77:0,43,126	1/1:3,14:18:42.10:456,42,0	1/1:5,20:25:57.01:588,57,0	1/1:1,10:11:27.07:299,27,0	0/0:19,1:20:27.05:0,27,458	0/0:12,0:12:26.97:0,27,234	0/0:16,0:16:41.98:0,42,362	0/0:27,0:27:37.26:0,37,541	0/0:26,0:26:74.02:0,74,628	0/0:25,0:25:59.96:0,60,516	0/0:8,0:8:24:0,24,208
chr10	16942101	.	T	TG	4636.47	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-8.709;DP=515;FS=2.889;HRun=5;HaplotypeScore=55.5630;InbreedingCoeff=0.9916;MQ=80.83;MQ0=0;MQRankSum=-1.677;QD=32.20;ReadPosRankSum=-1.166;VQSLOD=5.0033;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:90.23:0,90,967	0/0:7,0:7:15.04:0,15,161	0/0:18,0:18:38.78:0,39,440	0/0:19,0:19:42.88:0,43,421	0/0:19,0:19:54.11:0,54,565	0/0:13,0:13:39.06:0,39,407	0/0:16,0:16:45.10:0,45,476	1/1:2,23:25:69.18:861,69,0	0/0:13,0:13:33.08:0,33,354	0/0:26,0:26:63.14:0,63,667	0/0:11,0:11:33.08:0,33,351	0/0:23,0:23:69.15:0,69,732	0/0:12,0:12:33.08:0,33,355	0/0:13,0:13:36.09:0,36,387	0/0:19,0:19:57.13:0,57,605	1/1:2,11:13:33.11:434,33,0	0/0:30,0:30:90.21:0,90,958	1/1:2,19:21:57.19:750,57,0	1/1:2,14:16:39.12:500,39,0	1/1:1,6:7:15.05:197,15,0	1/1:5,40:45:99:1421,108,0	0/0:13,0:13:30.06:0,30,314	0/0:7,0:7:18.05:0,18,193	0/0:26,0:26:72.14:0,72,761	1/1:4,13:17:36.12:474,36,0	0/0:26,0:26:72.18:0,72,774	0/0:21,0:21:60.11:0,60,627	0/0:7,0:7:21.05:0,21,226
chr10	16942211	.	CCT	C	301.13	PASS	AB=0.964;AC=17;AF=0.327;AN=52;BaseQRankSum=-0.169;DP=232;FS=19.393;HRun=0;HaplotypeScore=47.4674;InbreedingCoeff=0.2384;MQ=102.21;MQ0=2;MQRankSum=-2.509;QD=3.76;ReadPosRankSum=-1.305;VQSLOD=0.0411;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:1.54:0,2,147	0/0:3,0:3:0.47:0,0,1	0/0:40,0:28:12.35:0,12,361	0/0:34,1:19:15.37:0,15,169	0/0:6,0:6:2.52:0,3,24	0/1:9,0:8:7.99:8,0,88	0/0:12,0:12:14.09:0,14,104	0/1:1,0:1:0:0,0,0	0/1:7,0:7:30.26:30,0,31	0/0:7,0:7:11.54:0,12,98	0/0:4,0:4:8.94:0,9,68	0/1:15,0:15:25.96:26,0,137	0/0:4,0:4:4.27:0,4,46	0/0:5,0:5:5.77:0,6,34	0/0:9,0:9:9.34:0,9,64	1/1:0,7:7:3.01:35,3,0	0/1:16,0:16:62.84:63,0,85	1/1:2,1:3:5.98:48,6,0	1/1:5,1:6:14.93:116,15,0	./.	1/1:5,0:5:9:78,9,0	./.	0/1:1,0:1:0:0,0,0	0/0:5,0:5:6.46:0,6,49	1/1:4,0:4:2.97:20,3,0	0/1:4,2:6:23.24:23,0,51	0/0:7,0:7:4.62:0,5,44	0/0:4,0:4:4.49:0,4,26
chr10	16942489	.	C	CG	5256.66	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-2.722;DP=456;FS=5.676;HRun=0;HaplotypeScore=67.8299;InbreedingCoeff=0.9321;MQ=79.66;MQ0=0;MQRankSum=-1.809;QD=41.72;ReadPosRankSum=0.138;VQSLOD=5.3355;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:90.30:0,90,1255	0/0:3,0:3:9.03:0,9,126	0/0:18,0:18:51.16:0,51,674	0/0:10,0:10:27.09:0,27,372	0/0:8,0:8:17.82:0,18,251	0/0:10,0:10:27.09:0,27,378	0/0:43,0:43:99:0,126,1674	1/1:0,11:11:30.07:431,30,0	0/0:11,0:11:33.07:0,33,439	0/0:10,0:10:27.08:0,27,364	0/0:7,0:7:21.07:0,21,293	0/0:22,0:22:66.21:0,66,906	0/0:16,0:16:45.14:0,45,613	0/0:20,0:20:60.18:0,60,807	0/0:13,0:13:39.13:0,39,545	1/1:0,12:12:30.10:479,30,0	0/0:38,0:38:99:0,114,1503	1/1:1,21:22:63.21:1006,63,0	1/1:0,13:13:39.13:620,39,0	1/1:0,4:4:9.03:143,9,0	1/1:0,57:57:99:2386,151,0	0/0:4,0:4:12.03:0,12,155	0/0:2,0:2:3.01:0,3,42	0/0:33,0:33:96.27:0,96,1304	1/1:0,7:7:12.04:192,12,0	0/0:18,0:18:54.17:0,54,738	0/0:8,0:8:24.08:0,24,335	0/0:6,0:6:18.04:0,18,234
chr10	16942826	.	T	TCC	2426.52	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-6.042;DP=421;FS=15.048;HRun=7;HaplotypeScore=59.3255;InbreedingCoeff=0.9108;MQ=75.06;MQ0=0;MQRankSum=-1.352;QD=29.24;ReadPosRankSum=-1.446;VQSLOD=1.6695;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:84.21:0,84,963	1/1:1,3:6:14.02:164,14,0	0/0:13,0:13:26.01:0,26,275	0/0:11,0:11:13.56:0,14,225	1/1:1,3:4:6.02:90,6,0	0/0:11,0:11:30.09:0,30,349	0/0:28,0:28:72.19:0,72,826	0/0:11,0:11:30.09:0,30,349	0/0:12,0:12:33.10:0,33,384	1/1:3,11:15:36.07:538,36,0	1/1:0,5:5:15.05:246,15,0	0/0:19,0:19:57.17:0,57,660	0/0:11,0:11:27.06:0,27,303	0/0:18,0:18:45.11:0,45,513	1/1:3,1:4:6.02:78,6,0	0/0:6,0:6:18.05:0,18,210	1/1:3,17:21:36.12:591,36,0	0/0:35,0:35:90.15:0,90,994	0/0:12,0:12:30.07:0,30,338	0/0:2,0:2:6.02:0,6,70	0/0:57,0:57:99:0,141,1590	0/0:6,0:6:15.04:0,15,174	0/0:3,0:3:9.03:0,9,105	0/0:31,0:31:66.13:0,66,753	0/0:17,0:17:45.13:0,45,520	1/1:4,10:15:34.94:482,35,0	1/1:3,6:9:27.07:395,27,0	1/1:4,0:4:5.97:45,6,0
chr10	16945129	.	AC	A	2478.05	PASS	AB=0.916;AC=33;AF=0.589;AN=56;BaseQRankSum=2.388;DP=502;FS=5.547;HRun=11;HaplotypeScore=77.4799;InbreedingCoeff=0.2297;MQ=74.95;MQ0=2;MQRankSum=-1.505;QD=6.72;ReadPosRankSum=6.082;VQSLOD=1.8595;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:27,1:28:27.05:27,0,298	1/1:7,1:10:15.99:101,16,0	0/0:31,2:30:2.66:0,3,298	0/0:19,0:17:29.42:0,29,228	0/1:8,7:15:6.04:146,0,6	0/0:7,0:7:11.99:0,12,111	0/0:19,2:21:8.46:0,8,294	0/1:26,0:26:7.45:7,0,55	0/1:22,2:24:41.36:41,0,341	1/1:3,5:8:14.98:123,15,0	1/1:6,5:11:8:148,8,0	0/1:12,1:13:0.61:1,0,186	0/1:10,2:12:23.20:23,0,164	0/0:11,3:14:2.34:0,2,203	1/1:16,8:25:52.75:396,53,0	1/1:18,0:18:1.56:57,2,0	1/1:13,8:23:46.98:330,47,0	1/1:26,0:26:32.58:95,33,0	0/1:16,0:16:6.42:65,0,6	1/1:6,0:6:1.53:31,2,0	0/0:28,0:27:2.81:0,3,41	0/0:10,1:11:1:0,1,168	0/1:9,0:9:3.49:3,0,128	0/1:28,4:31:77.29:77,0,351	1/1:13,0:13:14.26:41,14,0	1/1:18,7:25:53.27:402,53,0	1/1:3,12:17:43.89:340,44,0	1/1:5,7:11:23.94:193,24,0
chr10	16945138	.	CCCA	C	1883.63	PASS	AB=0.886;AC=8;AF=0.143;AN=56;BaseQRankSum=-1.871;DP=505;FS=14.497;HRun=0;HaplotypeScore=97.7996;InbreedingCoeff=0.4105;MQ=79.41;MQ0=2;MQRankSum=1.133;QD=17.60;ReadPosRankSum=2.837;VQSLOD=2.6326;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:77.11:0,77,1072	0/0:10,0:10:17.02:0,17,152	0/0:34,0:31:38.87:0,39,980	0/0:23,0:21:40.24:0,40,511	0/0:13,0:13:18.01:0,18,334	0/0:12,0:12:33.06:0,33,470	0/0:16,0:16:45.11:0,45,837	0/1:19,0:19:29.47:29,0,259	0/0:24,0:24:66.14:0,66,1112	0/0:8,0:8:23.72:0,24,222	0/0:10,0:10:26.99:0,27,276	0/0:14,0:14:39.03:0,39,585	0/0:12,0:12:33.07:0,33,551	0/0:16,0:16:42.05:0,42,632	0/0:26,0:26:70.74:0,71,664	0/1:3,16:19:20.59:682,0,21	0/0:24,0:24:69.57:0,70,645	1/1:2,22:24:51.13:800,51,0	0/1:19,0:19:91.79:92,0,93	0/1:14,0:14:30.56:88,0,31	0/0:22,0:21:14.83:0,15,212	0/0:11,0:11:33.10:0,33,554	0/0:10,0:10:30.05:0,30,450	0/0:29,0:28:81.16:0,81,1274	1/1:1,11:12:21.07:341,21,0	0/0:26,0:26:67.64:0,68,683	0/0:20,0:20:49.41:0,49,490	0/0:11,0:11:27.06:0,27,280
chr10	16945139	.	CCA	C	1058.29	PASS	AB=0.963;AC=11;AF=0.196;AN=56;BaseQRankSum=5.507;DP=557;FS=6.247;HRun=0;HaplotypeScore=95.1752;InbreedingCoeff=0.5211;MQ=77.94;MQ0=2;MQRankSum=0.398;QD=6.74;ReadPosRankSum=3.736;VQSLOD=2.1498;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:43.10:0,43,903	0/0:12,0:12:10.63:0,11,113	0/0:34,0:31:35.31:0,35,752	0/0:22,0:20:34.74:0,35,376	0/0:13,0:13:17.72:0,18,217	0/0:17,0:17:47.98:0,48,491	0/0:19,0:19:54.01:0,54,743	0/1:18,0:18:70.72:77,0,71	0/0:24,0:24:58.84:0,59,791	0/0:9,0:9:26.11:0,26,169	0/0:9,0:9:24.58:0,25,153	0/0:15,0:15:44.87:0,45,511	0/0:13,0:13:35.77:0,36,430	0/0:23,0:23:56.91:0,57,632	0/1:25,0:25:0.04:0,0,341	0/1:17,2:19:6.90:293,0,7	0/0:28,0:28:1.88:0,2,367	1/1:22,2:24:50.78:383,51,0	0/1:17,1:18:1.06:139,0,1	1/1:14,0:14:23.15:135,23,0	0/1:26,1:26:32.87:33,0,37	0/0:15,0:15:44.95:0,45,504	0/0:14,0:14:37.73:0,38,406	0/0:32,0:31:80.55:0,81,965	1/1:11,1:12:20.91:159,21,0	0/0:31,0:31:68.16:0,68,559	0/0:24,0:24:40.30:0,40,363	0/0:12,0:12:32.12:0,32,205
chr10	16945140	.	CA	C	1105.96	PASS	AB=0.640;AC=13;AF=0.232;AN=56;BaseQRankSum=6.799;DP=544;FS=10.109;HRun=3;HaplotypeScore=84.5661;InbreedingCoeff=0.7852;MQ=80.34;MQ0=2;MQRankSum=-0.347;QD=8.92;ReadPosRankSum=5.617;VQSLOD=0.2123;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:78.44:0,78,741	0/0:12,0:12:17.40:0,17,107	0/0:34,0:31:16.93:0,17,578	0/0:22,0:21:35.96:0,36,331	0/0:13,0:13:15.27:0,15,115	0/0:17,0:17:44.96:0,45,392	0/0:19,0:19:51.96:0,52,561	0/1:7,9:16:9.68:158,0,10	0/0:22,0:22:48.41:0,48,537	0/0:9,0:9:14.26:0,14,100	0/0:9,0:9:3.43:0,3,28	0/0:15,0:15:35.82:0,36,369	0/0:12,0:12:22.34:0,22,280	0/0:23,0:23:42.66:0,43,459	0/0:26,0:26:32.77:0,33,249	1/1:19,0:19:7.76:215,8,0	0/0:29,0:29:52.77:0,53,376	1/1:24,0:24:49.76:289,50,0	1/1:3,14:17:35.16:308,35,0	1/1:2,11:13:14.95:177,15,0	1/1:3,20:22:2.92:17,3,0	0/0:15,0:15:30.92:0,31,315	0/0:14,0:14:36.30:0,36,323	0/0:29,0:28:54.81:0,55,582	1/1:12,0:12:20.45:118,20,0	0/0:30,0:30:55.49:0,55,375	0/0:24,0:24:24.27:0,24,208	0/0:12,0:12:2.99:0,3,72
chr10	16945551	.	GT	G	7040.33	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=14.929;DP=733;FS=0.306;HRun=3;HaplotypeScore=69.5162;InbreedingCoeff=0.9992;MQ=82.39;MQ0=0;MQRankSum=-0.923;QD=34.34;ReadPosRankSum=-0.438;VQSLOD=5.0388;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,114,1622	0/0:7,0:7:21.07:0,21,302	0/0:16,0:16:37.56:0,38,547	0/0:23,1:24:66.18:0,66,902	0/0:36,0:36:99:0,108,1510	0/0:21,0:21:63.21:0,63,905	0/0:23,0:23:69.21:0,69,959	1/1:1,38:39:99:1333,111,0	0/0:30,0:30:87.28:0,87,1235	0/0:28,0:28:81.25:0,81,1120	0/0:21,0:21:63.18:0,63,886	0/0:28,0:28:84.27:0,84,1183	0/0:24,0:24:72.23:0,72,1016	0/0:22,0:22:65.57:0,66,897	0/0:34,0:34:96.27:0,96,1339	1/1:1,33:34:53.09:1109,53,0	0/0:20,0:20:54.18:0,54,774	1/1:0,29:29:81.25:1004,81,0	1/1:0,24:24:72.15:858,72,0	1/1:1,29:30:84.26:1031,84,0	1/1:0,24:24:72.23:892,72,0	0/0:19,0:19:57.19:0,57,820	0/0:35,0:35:99:0,102,1430	0/0:19,0:19:54.18:0,54,776	1/1:0,25:25:66.21:815,66,0	0/0:29,0:29:81.26:0,81,1132	0/0:30,0:30:87.28:0,87,1233	0/0:24,0:24:72.24:0,72,1032
chr10	16946194	.	CGTGT	C	4605.45	PASS	AB=0.714;AC=23;AF=0.411;AN=56;BaseQRankSum=11.983;DP=687;FS=0.825;HRun=0;HaplotypeScore=159.3483;InbreedingCoeff=0.8976;MQ=67.38;MQ0=12;MQRankSum=-5.950;QD=18.42;ReadPosRankSum=2.018;VQSLOD=4.2155;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:36:62.68:0,63,1227	1/1:5,3:8:12.02:148,12,0	0/0:37,0:20:6.02:0,6,83	0/0:46,0:22:19.42:0,19,173	1/1:5,21:28:15.34:298,15,0	0/0:29,0:30:62.70:0,63,1199	0/0:25,0:25:35.84:0,36,570	0/0:31,0:31:38.39:0,38,356	0/0:19,0:20:41.36:0,41,850	1/1:15,10:25:41.73:594,42,0	1/1:15,3:19:19.29:281,19,0	0/0:33,0:34:46.62:0,47,1397	0/0:21,0:21:52.21:0,52,1005	0/0:15,0:16:35.86:0,36,717	1/1:12,13:25:60:813,60,0	1/1:3,1:27:53.71:467,54,0	1/1:12,7:19:30:387,30,0	0/1:18,0:30:99:220,0,117	0/0:17,0:17:30.10:0,30,389	0/0:23,0:23:28.39:0,28,429	0/0:29,0:28:26.88:0,27,396	0/0:20,0:20:24.07:0,24,522	0/0:24,0:25:25.81:0,26,1046	0/0:24,0:25:56.49:0,56,1052	1/1:10,0:16:23.81:192,24,0	1/1:15,6:21:37.36:539,37,0	1/1:8,13:22:31.70:515,32,0	1/1:6,3:9:11.93:155,12,0
chr10	16946222	.	AGT	A	6132.26	PASS	AB=0.955;AC=36;AF=0.643;AN=56;BaseQRankSum=9.000;DP=720;FS=2.176;HRun=0;HaplotypeScore=139.3558;InbreedingCoeff=0.5763;MQ=55.20;MQ0=8;MQRankSum=-4.731;QD=12.02;ReadPosRankSum=1.410;VQSLOD=4.9792;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:59.66:0,60,967	1/1:2,9:11:5.96:54,6,0	0/1:31,0:16:4.40:4,0,238	0/0:53,0:26:21.17:0,21,380	1/1:16,15:31:35.77:391,36,0	0/0:26,1:27:20.68:0,21,815	0/1:19,1:19:9.48:9,0,314	0/1:24,0:24:30.38:336,0,30	0/0:20,0:20:45.01:0,45,640	1/1:6,14:20:44.92:508,45,0	1/1:6,10:16:14.07:140,14,0	0/0:29,0:29:77.78:0,78,1092	0/0:24,0:24:18.07:0,18,733	0/1:15,0:15:6.37:6,0,363	1/1:7,21:29:38.81:386,39,0	1/1:20,16:37:90.08:1018,90,0	1/1:4,11:16:21.06:235,21,0	1/1:12,24:36:37.14:411,37,0	1/1:20,2:20:22.21:291,22,0	1/1:20,0:20:3.49:153,3,0	1/1:32,2:33:46.89:525,47,0	0/0:18,0:18:39.12:0,39,581	0/1:24,2:26:19.66:20,0,584	0/1:28,6:34:0.86:1,0,845	1/1:4,17:21:21.06:234,21,0	1/1:10,22:31:66.17:759,66,0	1/1:0,26:26:45.12:505,45,0	1/1:5,3:8:14.26:147,14,0
chr10	16947491	.	GGTCTTGCAGAGACTGGA	G	12493.76	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=15.827;DP=732;FS=5.541;HRun=0;HaplotypeScore=324.2579;InbreedingCoeff=0.9993;MQ=88.39;MQ0=0;MQRankSum=-12.288;QD=81.66;ReadPosRankSum=-0.384;VQSLOD=3.8303;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,151,11213	0/0:12,0:12:36.12:0,36,2527	0/0:28,0:28:81.28:0,81,4723	0/0:29,0:29:78.27:0,78,5024	0/0:27,0:27:78.27:0,78,5257	0/0:22,0:22:66.23:0,66,5081	0/0:30,0:30:84.29:0,84,5407	1/1:9,19:28:57.11:1463,57,0	0/0:45,0:45:99:0,135,10173	0/0:21,0:21:54.19:0,54,4222	0/0:18,0:18:48.16:0,48,3880	0/0:29,0:29:87.27:0,87,6160	0/0:26,0:26:69.20:0,69,4420	0/0:23,0:23:66.23:0,66,4996	0/0:42,0:42:99:0,123,9279	1/1:2,36:38:81.28:3989,81,0	0/0:34,0:34:99:0,99,7671	1/1:0,19:19:27.09:1312,27,0	1/1:4,16:20:47.63:1599,48,0	1/1:4,12:16:36.12:1643,36,0	1/1:2,17:19:24.08:1018,24,0	0/0:24,0:24:69.22:0,69,4739	0/0:20,0:20:60.21:0,60,4102	0/0:28,0:28:81.28:0,81,6354	1/1:1,12:13:30.10:1470,30,0	0/0:23,0:23:63.22:0,63,5062	0/0:32,0:32:96.32:0,96,7068	0/0:15,0:15:42.14:0,42,3335
chr10	16947977	.	CATT	C	415.87	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=3.704;DP=250;FS=5.537;HRun=0;HaplotypeScore=41.6954;InbreedingCoeff=0.6585;MQ=93.65;MQ0=1;MQRankSum=-1.855;QD=6.12;ReadPosRankSum=-2.287;VQSLOD=0.4479;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:27.04:0,27,443	0/0:3,0:3:9.03:0,9,153	0/0:17,0:14:36:0,36,562	0/0:22,0:19:47.97:0,48,683	0/0:6,0:6:15:0,15,295	0/0:12,0:12:36.12:0,36,676	0/0:18,0:18:21.27:0,21,673	1/1:9,1:10:29.75:233,30,0	0/0:6,0:6:18.02:0,18,325	0/0:7,0:7:21.07:0,21,413	0/0:5,0:5:9.03:0,9,177	0/0:5,0:5:9:0,9,177	0/0:6,0:6:15.03:0,15,275	0/0:8,0:8:20.81:0,21,365	0/0:10,0:10:24.97:0,25,475	0/1:2,0:2:15.81:16,0,18	0/0:15,0:15:41.17:0,41,732	1/1:6,0:6:0.68:50,1,0	1/1:10,1:11:25.40:150,25,0	1/1:6,1:7:7.91:61,8,0	1/1:21,1:22:2.88:17,3,0	0/0:1,0:1:3.01:0,3,59	0/0:3,0:3:6:0,6,131	0/0:5,0:5:12.04:0,12,236	1/1:0,10:10:3.01:49,3,0	0/0:10,0:10:27.09:0,27,496	0/0:10,0:10:30.08:0,30,552	0/0:3,0:3:9.03:0,9,185
chr10	16947978	.	ATT	A	1069.95	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-0.986;DP=246;FS=2.635;HRun=2;HaplotypeScore=34.9651;InbreedingCoeff=0.7938;MQ=92.63;MQ0=1;MQRankSum=-0.862;QD=16.46;ReadPosRankSum=-2.237;VQSLOD=0.3306;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:27.02:0,27,387	0/0:3,0:3:8.92:0,9,132	0/0:17,0:14:39.06:0,39,525	0/0:22,0:18:29.31:0,29,540	0/0:6,0:6:17.73:0,18,268	0/0:12,0:12:36.08:0,36,574	0/0:19,0:19:38.37:0,38,596	1/1:10,0:10:30.10:446,30,0	0/0:6,0:6:18.02:0,18,249	0/0:7,0:7:21.07:0,21,367	0/0:5,0:5:9.03:0,9,153	0/0:5,0:5:11.78:0,12,178	0/0:5,0:5:15.03:0,15,204	0/0:7,0:7:20.26:0,20,296	0/0:11,0:11:26.76:0,27,436	1/1:1,0:1:3.01:46,3,0	0/0:15,0:15:40.95:0,41,660	1/1:6,0:6:17.05:176,17,0	1/1:2,9:11:26.79:345,27,0	1/1:6,0:6:12.02:159,12,0	1/1:1,19:21:2.97:35,3,0	0/0:1,0:1:3.01:0,3,52	0/0:2,0:2:6.02:0,6,102	0/0:5,0:5:12.04:0,12,209	1/1:10,0:10:3.01:37,3,0	0/0:10,0:10:24.07:0,24,400	0/0:10,0:10:30.10:0,30,484	0/0:3,0:3:9.03:0,9,151
chr10	16948261	.	CCCGCCTG	C	2120.93	PASS	AC=12;AF=0.222;AN=54;BaseQRankSum=3.307;DP=326;FS=4.493;HRun=0;HaplotypeScore=82.2452;InbreedingCoeff=0.8719;MQ=67.36;MQ0=0;MQRankSum=-6.108;QD=21.21;ReadPosRankSum=1.364;VQSLOD=2.8372;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:8:15.05:0,15,521	0/0:2,0:2:6.02:0,6,200	0/0:4,0:4:9.03:0,9,236	0/0:4,0:4:9:0,9,225	0/0:10,0:10:15.05:0,15,494	0/0:8,0:8:21.07:0,21,807	0/0:28,0:28:66.23:0,66,2461	1/1:7,9:16:22.21:408,22,0	0/0:12,0:12:33.11:0,33,1149	0/0:13,0:13:27.09:0,27,814	0/0:3,0:3:9.03:0,9,302	0/0:13,0:13:33.11:0,33,1095	0/0:7,0:7:21.07:0,21,751	0/0:10,0:10:24.08:0,24,812	0/0:11,0:11:30.10:0,30,951	1/1:2,10:12:24.08:588,24,0	0/0:27,0:27:78.27:0,78,2570	1/1:6,12:18:27.09:662,27,0	1/1:7,4:11:12.04:216,12,0	./.	1/1:19,16:35:8.61:202,9,0	0/0:4,0:4:9.03:0,9,333	0/0:2,0:2:6.02:0,6,216	0/0:18,0:18:42.14:0,42,1452	1/1:4,4:8:9.03:221,9,0	0/0:12,0:12:33.11:0,33,1086	0/0:21,0:20:63.22:0,63,2087	0/0:7,0:7:21.07:0,21,707
chr10	16948395	.	C	CT	4483.85	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-6.200;DP=534;FS=12.263;HRun=10;HaplotypeScore=68.1574;InbreedingCoeff=0.9802;MQ=73.77;MQ0=0;MQRankSum=-0.889;QD=22.09;ReadPosRankSum=1.143;VQSLOD=5.0667;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:41:99:0,112,898	1/1:1,6:7:18.05:191,18,0	0/0:14,0:16:33.55:0,34,238	0/0:13,0:12:20.86:0,21,111	1/1:3,9:12:26.99:263,27,0	0/0:19,0:19:31.88:0,32,413	0/0:26,0:26:62.91:0,63,514	0/0:25,0:25:50.93:0,51,418	0/0:11,0:11:26.95:0,27,222	1/1:3,11:14:30.53:312,31,0	1/1:1,6:7:18.05:192,18,0	0/0:22,0:22:8.56:0,9,364	0/0:20,0:20:59.90:0,60,488	0/0:15,0:15:35.90:0,36,292	1/1:7,13:20:33.08:352,33,0	1/1:2,13:15:11.45:327,11,0	1/1:6,29:35:78.20:832,78,0	1/1:6,24:32:71.78:717,72,0	0/0:20,0:20:44.87:0,45,365	0/0:12,0:14:31.98:0,32,252	0/0:30,0:30:68.87:0,69,561	0/0:14,0:15:37.13:0,37,274	0/0:15,0:15:29.22:0,29,245	0/0:26,0:26:65.83:0,66,535	1/1:1,16:17:30.08:320,30,0	1/1:4,17:22:26.43:466,26,0	1/1:1,12:13:33.08:352,33,0	1/1:2,7:9:15.04:160,15,0
chr10	16949033	.	CTT	C	1652.08	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=6.829;DP=475;FS=7.774;HRun=13;HaplotypeScore=95.1501;InbreedingCoeff=0.9494;MQ=65.02;MQ0=19;MQRankSum=0.572;QD=12.33;ReadPosRankSum=5.663;VQSLOD=2.2518;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,1:27:39.32:0,39,731	0/0:7,0:8:14.92:0,15,130	0/0:19,0:16:21.42:0,21,319	0/0:22,0:10:1.29:0,1,77	0/0:10,0:20:23.88:0,24,167	0/0:15,0:16:45.10:0,45,598	0/0:9,0:11:25.95:0,26,284	1/1:7,13:20:38.98:372,39,0	0/0:12,0:12:30.10:0,30,411	0/0:15,0:18:35.75:0,36,276	0/0:11,0:12:21.78:0,22,170	0/0:21,0:22:53.12:0,53,625	0/0:12,0:11:27.06:0,27,355	0/0:22,0:21:59.91:0,60,663	0/0:7,0:10:20.81:0,21,148	1/1:4,0:19:28.17:155,28,0	0/0:11,0:13:21.87:0,22,209	1/1:5,1:20:14.14:153,14,0	1/1:7,10:18:23.90:282,24,0	1/1:6,15:21:41.97:407,42,0	1/1:2,11:13:35.62:323,36,0	0/0:12,0:14:39.05:0,39,475	0/0:16,0:18:41.02:0,41,474	0/0:14,0:13:36.07:0,36,481	1/1:6,0:18:35.63:156,36,0	0/0:8,0:12:29.87:0,30,246	0/0:17,0:18:48.09:0,48,416	0/0:13,0:12:27.69:0,28,195
chr10	16951640	.	GCTCTCTCTCTCTCT	G	1513.09	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=4.892;DP=521;FS=22.113;HRun=0;HaplotypeScore=194.5799;InbreedingCoeff=0.5287;MQ=70.46;MQ0=9;MQRankSum=-4.926;QD=27.02;ReadPosRankSum=2.555;VQSLOD=1.4426;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:16:36.06:0,36,1613	0/0:10,0:9:9.50:0,10,352	0/0:24,0:17:15.05:0,15,459	0/0:37,0:22:20.51:0,21,496	0/0:5,0:5:3.01:0,3,180	0/0:11,0:14:33.11:0,33,1692	0/0:12,0:12:18.06:0,18,1200	0/0:29,0:26:24.08:0,24,1123	0/0:7,0:13:21.07:0,21,1092	0/0:14,0:18:36.11:0,36,1656	0/0:8,0:7:3.01:0,3,112	0/0:12,0:12:27.09:0,27,1653	0/0:21,0:24:60.21:0,60,3192	0/0:20,0:20:33.58:0,34,1772	0/0:15,0:19:9.44:0,9,180	1/1:5,18:25:37.01:1463,37,0	0/0:36,0:37:46.04:0,46,1790	1/1:7,2:9:3.01:119,3,0	0/1:22,0:21:48.16:48,0,1610	0/0:20,0:19:18.53:0,19,870	0/0:16,0:16:12.04:0,12,638	0/0:11,0:10:18.06:0,18,744	0/0:11,0:13:18.06:0,18,862	0/0:19,0:20:36.12:0,36,2322	0/0:18,0:18:11.80:0,12,477	0/0:19,0:25:55.88:0,56,2323	0/0:24,0:23:30.09:0,30,1236	0/0:18,0:17:30.08:0,30,1361
chr10	16951726	.	CATCTATCT	C	636.48	PASS	AB=0.889;AC=11;AF=0.220;AN=50;BaseQRankSum=1.037;DP=497;FS=0.000;HRun=0;HaplotypeScore=134.7380;InbreedingCoeff=0.2771;MQ=52.53;MQ0=5;MQRankSum=-1.136;QD=4.79;ReadPosRankSum=-2.154;VQSLOD=2.0431;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:16,6:21:0.47:0,0,1	0/0:3,0:3:3:0,3,25	./.	./.	0/1:19,0:18:11.09:28,0,11	./.	1/1:12,0:11:2.96:19,3,0	0/0:44,0:39:0.89:0,1,2	1/1:14,3:17:9.03:215,9,0	0/1:14,0:13:57.28:57,0,169	0/0:5,0:5:3.01:0,3,114	0/1:11,6:18:15.34:135,0,15	0/1:23,1:25:85.57:241,0,86	0/0:12,0:19:8.97:0,9,70	0/0:24,0:24:30.10:0,30,1027	0/0:27,0:26:33.11:0,33,808	0/0:28,0:28:24.40:0,24,530	0/0:15,0:15:22.32:0,22,474	0/0:24,0:19:18.06:0,18,512	0/0:12,0:12:12.02:0,12,242	0/0:8,0:8:5.89:0,6,40	0/0:3,3:6:0:0,0,0	1/1:8,0:8:3.01:70,3,0	0/1:15,5:20:0:0,0,0	0/0:12,0:12:3.01:0,3,54	0/0:30,0:30:50.84:0,51,1580	0/0:23,0:23:37:0,37,1138	0/0:17,0:17:21.07:0,21,813
chr10	16951734	.	T	TATCC	633.74	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=3.761;DP=490;FS=1.377;HRun=0;HaplotypeScore=96.3745;InbreedingCoeff=-0.0943;MQ=52.19;MQ0=13;MQRankSum=-1.440;QD=3.64;ReadPosRankSum=-2.925;VQSLOD=0.8407;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:18:20.91:0,21,164	0/0:3,0:3:8.99:0,9,74	0/0:4,0:2:3:0,3,28	0/0:8,0:4:9.02:0,9,96	0/1:19,0:18:10.35:10,0,311	0/0:19,0:19:35.77:0,36,282	0/1:16,0:15:85.63:86,0,138	0/0:47,0:31:89.85:0,90,768	0/1:17,0:17:99:126,0,247	0/1:14,0:13:36.35:36,0,209	0/0:5,0:5:11.99:0,12,100	0/1:18,0:18:74.12:74,0,208	0/1:26,0:26:99:137,0,425	0/0:19,0:19:41.93:0,42,380	0/0:24,0:24:59.91:0,60,691	0/1:28,0:27:87.78:88,0,628	0/0:27,0:27:12.15:0,12,274	0/1:16,0:16:78.11:78,0,347	0/0:24,0:19:45.81:0,46,387	0/0:12,0:12:28.23:0,28,256	0/0:8,0:8:8.71:0,9,65	0/0:6,0:6:8.82:0,9,75	0/1:6,0:6:56.53:57,0,85	0/0:18,0:18:20.92:0,21,167	1/1:1,12:14:5.23:88,5,0	0/0:33,0:33:90.10:0,90,1214	0/0:25,0:25:68.45:0,68,856	0/0:14,0:14:39.87:0,40,446
chr10	16951906	.	AGTGTGT	A	869.64	PASS	AB=0.972;AC=22;AF=0.550;AN=40;BaseQRankSum=3.114;DP=421;FS=4.057;HRun=0;HaplotypeScore=95.9511;InbreedingCoeff=0.5450;MQ=63.05;MQ0=15;MQRankSum=-4.706;QD=6.17;ReadPosRankSum=1.384;VQSLOD=1.8373;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:12.49:0,12,145	0/1:6,0:6:0:0,0,0	./.	./.	1/1:7,1:8:2.97:20,3,0	0/0:15,0:15:6.02:0,6,91	0/0:17,0:20:11.52:0,12,157	./.	1/1:10,0:12:0.88:2,1,0	./.	1/1:5,2:7:3.01:60,3,0	0/0:13,0:13:9.03:0,9,117	0/0:10,0:11:6.02:0,6,69	./.	./.	1/1:10,2:14:9.91:182,10,0	1/1:18,3:20:6.02:120,6,0	1/1:8,0:8:6.91:92,7,0	1/1:8,0:13:6.02:84,6,0	1/1:2,0:9:12.02:137,12,0	./.	0/0:11,0:9:3.01:0,3,42	0/0:7,1:7:6.01:0,6,67	0/0:27,0:28:21.04:0,21,253	1/1:7,0:11:6.02:84,6,0	0/1:16,0:16:43.81:54,0,44	1/1:9,5:14:9.03:180,9,0	./.
chr10	16952682	.	ACTG	A	7659.05	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=17.382;DP=632;FS=4.674;HRun=0;HaplotypeScore=120.0423;InbreedingCoeff=0.9997;MQ=84.48;MQ0=0;MQRankSum=-7.812;QD=42.55;ReadPosRankSum=4.890;VQSLOD=6.4420;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,132,3069	1/1:1,9:10:27.09:473,27,0	0/0:26,0:26:49.71:0,50,1357	0/0:19,0:19:52.99:0,53,1003	1/1:1,21:22:33.11:581,33,0	0/0:24,0:24:72.25:0,72,1702	0/0:23,0:23:69.24:0,69,1605	0/0:40,0:40:99:0,117,2690	0/0:24,0:24:69.24:0,69,1611	1/1:0,16:16:48.16:827,48,0	1/1:1,15:16:33.11:582,33,0	0/0:22,0:22:66.23:0,66,1536	0/0:20,0:20:60.21:0,60,1418	0/0:22,0:22:60.21:0,60,1419	1/1:0,21:21:63.22:1111,63,0	0/0:23,0:23:69.24:0,69,1626	1/1:0,26:26:69.24:1210,69,0	0/0:19,0:19:54.19:0,54,1272	0/0:19,0:19:48.14:0,48,1012	0/0:27,0:27:78.27:0,78,1838	0/0:29,0:29:87.30:0,87,2033	0/0:12,0:12:33.11:0,33,774	0/0:17,0:17:51.18:0,51,1176	0/0:26,0:26:75.26:0,75,1762	0/0:15,0:15:45.15:0,45,1063	1/1:4,24:28:72.20:1236,72,0	1/1:2,25:27:57.20:1005,57,0	1/1:2,12:14:36.12:635,36,0
chr10	16953266	.	TACAC	T	218.67	PASS	AB=0.870;AC=6;AF=0.130;AN=46;BaseQRankSum=4.362;DP=580;FS=1.273;HRun=0;HaplotypeScore=105.2272;InbreedingCoeff=0.3965;MQ=66.05;MQ0=16;MQRankSum=-1.783;QD=3.17;ReadPosRankSum=0.409;VQSLOD=1.9258;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:21.06:0,21,406	./.	./.	./.	0/0:9,0:10:14.75:0,15,174	0/0:13,0:14:9.21:0,9,63	0/0:23,0:22:3.08:0,3,129	./.	0/1:16,1:18:24.97:25,0,304	0/0:21,0:22:13.09:0,13,150	0/0:9,0:9:3.01:0,3,43	0/0:21,0:21:9.03:0,9,148	0/0:17,0:17:15.03:0,15,277	0/0:22,0:22:27.01:0,27,450	0/0:26,0:28:17.80:0,18,302	1/1:12,2:14:6.89:76,7,0	0/0:29,0:30:22.61:0,23,390	0/1:14,5:19:5.30:124,0,5	0/0:18,0:18:3.01:0,3,67	./.	0/0:58,0:55:30.10:0,30,594	0/0:7,0:12:8.06:0,8,120	0/0:9,0:9:6.02:0,6,116	0/0:41,0:41:45.12:0,45,983	1/1:10,0:17:12.01:112,12,0	0/0:23,0:23:15.01:0,15,274	0/0:15,0:18:12.03:0,12,245	0/0:5,0:4:6.02:0,6,94
chr10	16953681	.	T	TC	2932.21	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-5.087;DP=644;FS=9.084;HRun=6;HaplotypeScore=84.6007;InbreedingCoeff=0.9918;MQ=82.68;MQ0=1;MQRankSum=-3.775;QD=29.62;ReadPosRankSum=-2.327;VQSLOD=2.8917;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,108,1095	0/0:10,0:10:21.03:0,21,208	0/0:17,0:17:50.14:0,50,493	0/0:22,1:23:27.28:0,27,334	0/0:25,0:25:72.09:0,72,719	0/0:17,0:17:51.12:0,51,520	0/0:24,0:24:66.14:0,66,673	1/1:4,24:28:72.20:879,72,0	0/0:21,0:21:54.12:0,54,550	0/0:29,0:29:72.14:0,72,723	0/0:14,0:14:33.07:0,33,336	0/0:25,0:25:72.15:0,72,726	0/0:25,0:25:66.13:0,66,665	0/0:23,0:23:66.09:0,66,654	0/0:31,0:31:72.12:0,72,720	0/0:22,0:22:63.14:0,63,643	0/0:32,0:32:87.18:0,87,880	0/0:33,0:33:90.20:0,90,917	1/1:2,15:17:45.13:553,45,0	1/1:3,6:9:18.06:226,18,0	1/1:2,43:45:99:1434,114,0	0/0:17,0:17:45.09:0,45,456	0/0:20,0:20:51.10:0,51,516	0/0:22,0:22:60.11:0,60,603	0/0:16,0:16:36.08:0,36,367	0/0:29,0:29:72.15:0,72,734	0/0:21,0:21:51.10:0,51,520	0/0:5,0:5:15.03:0,15,153
chr10	16953973	.	T	TCC	5122.61	PASS	AB=1.000;AC=33;AF=0.589;AN=56;BaseQRankSum=8.017;DP=568;FS=4.440;HRun=7;HaplotypeScore=105.9111;InbreedingCoeff=0.9380;MQ=79.98;MQ0=0;MQRankSum=-0.596;QD=16.37;ReadPosRankSum=-0.187;VQSLOD=2.4181;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,101,1140	1/1:13,0:13:32.33:338,32,0	0/1:34,0:26:0.18:0,0,282	0/0:25,0:21:22.40:0,22,189	1/1:12,0:13:32.09:248,32,0	0/0:21,0:21:47.94:0,48,510	0/0:25,0:25:57.15:0,57,663	1/1:20,2:22:16.25:130,16,0	0/0:13,0:13:33.08:0,33,372	1/1:21,0:21:45.58:468,46,0	1/1:12,0:15:31.07:294,31,0	0/0:22,0:22:48.10:0,48,543	0/0:19,0:19:51.10:0,51,561	0/0:25,0:25:57.09:0,57,634	1/1:18,0:18:43.54:312,44,0	1/1:17,0:17:47.29:333,47,0	1/1:35,1:36:99:786,100,0	1/1:22,0:22:53.58:444,54,0	1/1:7,2:9:11.77:140,12,0	1/1:5,2:8:6.02:84,6,0	1/1:14,4:22:20.66:270,21,0	0/0:14,0:14:36.10:0,36,414	0/0:21,0:21:54.13:0,54,616	0/0:23,0:23:63.14:0,63,700	1/1:12,0:13:24.57:317,25,0	1/1:23,0:23:49.83:497,50,0	1/1:19,0:20:44.53:289,45,0	1/1:5,0:6:14.86:173,15,0
chr10	16954515	.	A	AC	6496.13	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-2.734;DP=627;FS=5.774;HRun=5;HaplotypeScore=68.1781;InbreedingCoeff=0.9974;MQ=79.53;MQ0=0;MQRankSum=-0.419;QD=34.74;ReadPosRankSum=2.040;VQSLOD=5.1366;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,141,1495	1/1:0,8:8:18.06:237,18,0	0/0:12,0:12:30.02:0,30,305	0/0:22,0:22:45.05:0,45,470	1/1:2,22:24:57.19:749,57,0	0/0:25,0:25:63.14:0,63,666	0/0:21,0:21:63.14:0,63,668	0/0:25,0:25:63.15:0,63,670	0/0:27,0:27:78.18:0,78,829	1/1:1,17:18:51.14:654,51,0	1/1:1,15:16:48.13:614,48,0	0/0:18,0:18:51.13:0,51,548	0/0:13,0:13:39.10:0,39,419	0/0:19,0:19:54.12:0,54,568	1/1:0,24:24:69.22:908,69,0	0/0:23,0:22:69.16:0,69,734	1/1:1,39:40:99:1421,108,0	0/0:20,0:20:54.13:0,54,580	0/0:21,0:21:42.10:0,42,451	0/0:18,0:18:45.11:0,45,482	0/0:24,0:24:69.17:0,69,742	0/0:28,0:28:78.20:0,78,838	0/0:20,0:20:57.14:0,57,612	0/0:36,0:36:99:0,102,1088	0/0:20,0:20:57.14:0,57,613	1/1:4,25:29:78.24:1005,78,0	1/1:1,21:22:50.91:671,51,0	1/1:0,6:6:18.06:237,18,0
chr10	16954892	.	G	GGA	1832.70	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=2.845;DP=685;FS=3.860;HRun=0;HaplotypeScore=123.1626;InbreedingCoeff=0.9897;MQ=58.16;MQ0=13;MQRankSum=-3.175;QD=38.99;ReadPosRankSum=1.153;VQSLOD=5.2599;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:75.21:0,75,1005	0/0:10,0:10:27.09:0,27,370	0/0:31,0:22:34.72:0,35,496	0/0:48,0:35:72.26:0,72,879	0/0:26,0:25:60.13:0,60,801	0/0:22,0:22:66.21:0,66,890	0/0:32,0:31:90.26:0,90,1184	0/0:28,0:10:24.08:0,24,330	0/0:30,0:30:87.26:0,87,1161	0/0:34,0:34:90.30:0,90,1237	0/0:15,0:15:33.11:0,33,453	0/0:19,0:19:57.19:0,57,783	0/0:22,0:22:63.21:0,63,865	0/0:17,0:17:48.13:0,48,624	0/0:23,0:23:57.19:0,57,783	1/1:4,22:25:72.24:1242,72,0	0/0:25,0:22:48.16:0,48,653	1/1:8,13:19:42.11:712,42,0	0/0:21,0:15:33.10:0,33,440	0/0:15,0:15:30.99:0,31,414	0/0:13,0:12:15.05:0,15,206	0/0:20,0:20:51.17:0,51,699	0/0:16,0:16:42.14:0,42,577	0/0:45,0:45:99:0,120,1632	0/0:27,0:27:69.19:0,69,927	0/0:26,0:25:66.10:0,66,841	0/0:28,0:28:56.93:0,57,752	0/0:16,0:16:42.10:0,42,527
chr10	16954935	.	C	CG	516.83	PASS	AB=1.000;AC=4;AF=0.071;AN=56;BaseQRankSum=6.864;DP=556;FS=9.242;HRun=2;HaplotypeScore=104.4109;InbreedingCoeff=0.4101;MQ=51.99;MQ0=7;MQRankSum=-1.504;QD=8.20;ReadPosRankSum=3.229;VQSLOD=0.6022;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:34:84.26:0,84,1138	0/0:13,0:13:28.18:0,28,203	0/0:17,0:13:39.13:0,39,544	0/0:25,0:19:51.16:0,51,689	0/0:18,0:16:11.17:0,11,131	0/0:15,0:15:42.13:0,42,568	0/0:39,0:38:99:0,108,1478	0/0:8,0:3:4.44:0,4,14	0/0:24,0:24:63.21:0,63,872	0/0:25,0:23:56.53:0,57,312	0/0:7,0:7:11.19:0,11,80	0/0:21,0:21:60.20:0,60,828	0/0:18,0:18:45.15:0,45,615	0/0:18,0:18:51.17:0,51,699	0/0:37,0:34:54.26:0,54,328	0/1:30,0:27:8.77:9,0,245	0/0:14,0:11:27.76:0,28,176	0/1:14,0:11:8.72:9,0,13	0/0:17,0:9:23:0,23,150	0/0:11,0:10:13.07:0,13,81	0/0:7,0:4:2.98:0,3,23	0/0:15,0:15:41.85:0,42,529	0/0:16,0:16:39.07:0,39,504	0/0:42,0:42:99:0,120,1647	1/1:4,14:19:38.44:607,38,0	0/0:20,0:17:28.17:0,28,153	0/0:20,0:17:31.08:0,31,185	0/0:11,0:10:19.64:0,20,116
chr10	16954936	.	A	AG	1463.54	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=5.693;DP=562;FS=20.444;HRun=2;HaplotypeScore=102.1707;InbreedingCoeff=0.5860;MQ=50.50;MQ0=7;MQRankSum=-0.470;QD=14.64;ReadPosRankSum=-0.889;VQSLOD=1.9283;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:35:35.47:0,35,715	0/0:14,0:14:23.71:0,24,181	0/0:17,0:13:39.12:0,39,476	0/0:24,0:18:45.14:0,45,555	0/0:20,0:17:2.94:0,3,119	0/0:16,0:16:9.67:0,10,341	0/0:39,0:38:84.02:0,84,958	0/1:7,0:3:0:0,0,0	0/0:23,0:23:46.30:0,46,525	0/0:27,0:25:32.14:0,32,240	0/0:8,0:7:8.93:0,9,68	0/0:20,0:20:48.40:0,48,527	0/0:17,0:17:36.58:0,37,446	0/0:18,0:18:37.73:0,38,428	0/0:37,0:34:35.52:0,36,242	1/1:10,21:27:48.07:610,48,0	0/0:14,0:11:23.31:0,23,153	1/1:0,13:10:24.08:345,24,0	0/0:17,0:9:19.42:0,19,132	0/0:12,0:11:8.62:0,9,66	0/0:7,0:4:2.98:0,3,23	0/1:15,0:15:14.31:14,0,335	0/1:15,0:15:13.20:13,0,336	0/0:42,0:42:94.50:0,94,1110	1/1:19,0:19:45.99:630,46,0	0/0:21,0:18:11.49:0,11,90	0/0:22,0:17:23.04:0,23,148	0/0:11,0:10:10.94:0,11,84
chr10	16955082	.	TA	T	2216.38	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=12.385;DP=621;FS=4.527;HRun=1;HaplotypeScore=102.1215;InbreedingCoeff=0.9754;MQ=62.77;MQ0=1;MQRankSum=-3.278;QD=27.03;ReadPosRankSum=3.085;VQSLOD=3.6546;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:31:87.30:0,87,1384	0/0:5,0:5:15.05:0,15,240	0/0:23,0:22:60.20:0,60,940	0/0:27,0:25:71.91:0,72,1112	0/0:13,0:13:39.13:0,39,623	0/0:19,0:19:54.18:0,54,863	0/0:39,0:39:99:0,114,1750	1/1:0,5:5:12:133,12,0	0/0:20,0:20:57.19:0,57,907	0/0:28,0:28:81.28:0,81,1295	0/0:21,0:21:60.20:0,60,959	0/0:17,0:16:48.16:0,48,764	0/0:16,0:16:48.15:0,48,742	0/0:19,0:19:54.18:0,54,863	0/0:36,0:36:99:0,102,1601	0/0:28,0:28:69.24:0,69,1102	0/0:26,0:26:66.23:0,66,1055	0/0:30,0:29:78.24:0,78,1212	1/1:0,9:9:27.09:342,27,0	1/1:1,19:20:39.12:491,39,0	1/1:0,25:25:69.22:874,69,0	0/0:24,0:24:72.25:0,72,1147	0/0:22,0:22:66.23:0,66,1055	0/0:35,0:35:99:0,102,1607	1/1:0,23:23:45.13:549,45,0	0/0:26,0:26:78.27:0,78,1246	0/0:30,0:30:87.28:0,87,1364	0/0:3,0:3:9.03:0,9,144
chr10	16956533	.	GA	G	12939.54	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=17.303;DP=835;FS=3.264;HRun=4;HaplotypeScore=85.7704;InbreedingCoeff=0.9978;MQ=82.53;MQ0=0;MQRankSum=-4.100;QD=32.35;ReadPosRankSum=1.983;VQSLOD=5.4793;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,153,2083	1/1:2,8:10:18.05:215,18,0	0/0:28,0:28:81.19:0,81,1047	0/0:18,0:18:45.06:0,45,547	1/1:3,28:31:75.23:894,75,0	0/0:26,0:26:78.18:0,78,1046	0/0:31,0:31:93.30:0,93,1284	1/1:1,31:32:93.20:1046,93,0	0/0:42,0:42:99:0,126,1730	1/1:0,27:27:81.23:958,81,0	1/1:1,13:14:36.11:432,36,0	0/0:25,0:25:72.24:0,72,1006	0/0:32,0:32:93.30:0,93,1287	0/0:35,0:35:99:0,105,1454	1/1:1,33:34:96.29:1151,96,0	0/0:31,0:31:90.28:0,90,1227	1/1:1,34:35:96.29:1152,96,0	0/0:27,0:27:81.25:0,81,1112	1/1:1,22:23:66.20:792,66,0	1/1:2,30:32:78.19:914,78,0	1/1:1,61:62:99:2051,172,0	0/0:28,0:28:81.27:0,81,1133	0/0:26,0:26:78.24:0,78,1055	0/0:33,0:33:93.19:0,93,1190	1/1:0,22:22:60.18:720,60,0	1/1:2,38:40:99:1321,111,0	1/1:0,31:31:90.28:1079,90,0	1/1:0,7:7:18.06:216,18,0
chr10	16957312	.	GGTGTGTGT	G	1075.62	PASS	AB=0.868;AC=7;AF=0.135;AN=52;BaseQRankSum=4.691;DP=599;FS=0.000;HRun=0;HaplotypeScore=192.3938;InbreedingCoeff=0.5948;MQ=50.44;MQ0=7;MQRankSum=-2.275;QD=10.24;ReadPosRankSum=-0.352;VQSLOD=2.6006;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:45.15:0,45,1564	0/0:7,0:6:2.13:0,2,7	./.	./.	0/0:28,0:28:5.95:0,6,89	0/0:20,0:20:23.94:0,24,753	0/0:29,0:30:30.09:0,30,941	0/1:28,5:31:75.32:169,0,75	0/0:20,0:19:33.11:0,33,1273	0/0:26,0:25:48.16:0,48,1413	0/0:17,0:17:6.46:0,6,100	0/0:24,0:23:12.04:0,12,460	0/0:18,0:20:36.07:0,36,903	0/0:15,0:15:21.04:0,21,598	0/0:30,0:30:6.49:0,6,186	0/0:29,0:27:9.03:0,9,220	0/0:17,0:17:9.03:0,9,216	0/0:22,0:22:19.86:0,20,527	1/1:19,6:25:16.82:291,17,0	1/1:6,13:19:27.09:674,27,0	1/1:23,5:27:3.01:76,3,0	0/0:15,0:15:21.07:0,21,766	0/0:16,0:17:18.04:0,18,482	0/0:28,0:28:33.11:0,33,1192	0/0:18,0:19:14.92:0,15,560	0/0:32,0:31:55.53:0,56,1730	0/0:17,0:16:18.06:0,18,453	0/0:8,0:8:6.02:0,6,146
chr10	16957354	.	T	TAG	1594.70	PASS	AB=0.717;AC=12;AF=0.214;AN=56;BaseQRankSum=4.902;DP=565;FS=23.059;HRun=0;HaplotypeScore=155.6778;InbreedingCoeff=0.4268;MQ=58.47;MQ0=7;MQRankSum=-0.619;QD=9.61;ReadPosRankSum=2.389;VQSLOD=1.9427;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:69.04:0,69,1018	1/1:11,1:11:17.41:220,17,0	0/0:30,0:19:54.14:0,54,790	0/0:22,0:18:50.72:0,51,783	1/1:8,14:23:2.80:35,3,0	0/0:17,0:17:38.93:0,39,555	0/0:20,0:20:51.15:0,51,767	0/0:40,0:40:99:0,102,1523	0/0:28,0:28:69.19:0,69,993	0/1:13,14:27:99:458,0,104	0/1:7,7:14:0:0,0,0	0/0:13,0:13:27.07:0,27,416	0/0:15,0:15:36.05:0,36,456	0/0:16,0:16:24.94:0,25,411	0/0:11,18:29:3.95:0,4,29	0/0:19,0:17:19.48:0,19,175	0/1:6,13:19:0.53:34,0,1	0/0:17,0:17:40.50:0,41,488	0/0:17,0:17:48.10:0,48,665	0/0:23,0:23:53.99:0,54,624	0/0:20,0:19:14.57:0,15,205	0/0:15,0:15:42.11:0,42,589	0/0:10,0:10:19.90:0,20,260	0/0:21,0:21:48.15:0,48,721	0/1:11,8:19:3.14:3,0,94	0/1:16,8:24:99:401,0,156	0/1:15,0:15:30.63:297,0,31	1/1:10,1:11:7.48:295,7,0
chr10	16958073	.	C	CT	6209.48	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=4.928;DP=477;FS=23.226;HRun=0;HaplotypeScore=53.8121;InbreedingCoeff=0.9825;MQ=69.07;MQ0=2;MQRankSum=-0.327;QD=44.67;ReadPosRankSum=3.578;VQSLOD=2.8485;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:84.26:0,84,1150	1/1:0,5:5:12.04:192,12,0	0/0:24,0:23:66.11:0,66,871	0/0:27,0:26:69.10:0,69,838	1/1:0,14:14:39.13:623,39,0	0/0:21,0:21:60.16:0,60,816	0/0:15,0:15:42.14:0,42,587	0/0:25,0:25:72.20:0,72,982	0/0:22,0:22:63.17:0,63,857	1/1:0,16:16:48.16:767,48,0	1/1:0,7:7:21.07:336,21,0	0/0:17,0:17:51.17:0,51,711	0/0:17,0:17:45.14:0,45,611	0/0:10,0:10:27.09:0,27,372	1/1:0,18:18:51.17:815,51,0	0/0:8,0:8:24.08:0,24,335	1/1:1,36:37:99:1630,102,0	0/0:13,0:13:39.13:0,39,543	0/0:13,0:13:39.13:0,39,541	0/0:4,0:4:12.04:0,12,168	0/0:58,0:57:99:0,169,2328	0/0:10,0:10:30.10:0,30,419	0/0:5,0:5:15.05:0,15,198	0/0:20,0:20:54.09:0,54,706	1/1:0,14:14:33.11:527,33,0	1/1:0,15:15:45.14:696,45,0	1/1:0,9:9:27.09:432,27,0	1/1:0,4:4:12.04:192,12,0
chr10	16958214	.	T	TAATAATAATAATA	6755.94	PASS	AB=0.930;AC=19;AF=0.352;AN=54;BaseQRankSum=5.962;DP=214;FS=23.168;HRun=0;HaplotypeScore=91.7049;InbreedingCoeff=-0.1313;MQ=65.02;MQ0=1;MQRankSum=-7.884;QD=41.96;ReadPosRankSum=2.463;VQSLOD=2.8331;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:16,0:16:31.68:32,0,1238	0/1:2,1:3:3.14:251,0,3	0/0:6,0:3:2.88:0,3,38	0/1:7,0:4:3.58:5,0,4	0/1:10,0:10:54.71:174,0,55	0/0:16,0:16:45.14:0,45,1323	0/0:3,0:3:9.03:0,9,128	0/1:29,0:28:49.47:982,0,49	0/0:4,0:4:12.04:0,12,239	0/1:3,0:3:11.65:79,0,12	0/1:4,3:7:4.42:614,0,4	0/0:7,0:7:21.07:0,21,765	0/0:3,0:3:9.03:0,9,284	0/0:3,0:3:9.02:0,9,102	0/1:5,0:5:13.07:248,0,13	1/1:5,0:7:6.80:308,7,0	1/1:11,2:13:3.20:1112,3,0	0/1:12,0:12:27.05:532,0,27	0/1:7,0:7:15.54:294,0,16	0/1:5,0:5:0.13:199,0,0	0/0:2,0:2:2.98:0,3,22	0/0:3,0:3:9.03:0,9,116	0/0:6,0:6:12.04:0,12,155	./.	0/1:10,0:14:25.09:568,0,25	0/1:7,0:7:14.53:443,0,15	0/1:7,0:7:27.12:362,0,27	0/1:5,3:8:1.60:552,0,2
chr10	16959187	.	CT	C	2018.84	PASS	AB=0.583;AC=17;AF=0.315;AN=54;BaseQRankSum=8.431;DP=311;FS=5.773;HRun=10;HaplotypeScore=31.5308;InbreedingCoeff=0.8093;MQ=53.34;MQ0=21;MQRankSum=-0.443;QD=17.26;ReadPosRankSum=2.493;VQSLOD=3.4431;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:18:48.60:0,49,531	1/1:2,4:6:11.99:104,12,0	0/0:16,0:5:9.02:0,9,99	0/0:8,1:3:2.88:0,3,16	1/1:4,18:20:53.98:468,54,0	0/0:14,0:14:39.11:0,39,431	0/0:5,0:5:12.03:0,12,133	0/0:20,0:17:42.11:0,42,464	0/0:9,0:7:15.04:0,15,166	1/1:3,10:11:29.99:260,30,0	1/1:1,9:10:23.03:188,23,0	0/0:9,0:7:18.05:0,18,199	0/0:3,0:1:3:0,3,28	0/0:6,0:6:12.02:0,12,124	0/1:2,5:6:15.15:112,0,15	0/0:7,0:7:18.03:0,18,187	1/1:5,18:22:50.98:442,51,0	0/0:12,0:10:27.07:0,27,298	0/0:20,0:18:30.08:0,30,332	0/0:6,0:6:15.04:0,15,165	0/0:7,0:6:15.04:0,15,166	0/0:4,0:3:6.02:0,6,66	0/0:6,0:6:18.05:0,18,199	./.	0/0:18,0:18:45.06:0,45,474	1/1:2,7:9:20.99:182,21,0	1/1:3,9:11:17.06:199,17,0	1/1:1,13:14:29.99:260,30,0
chr10	16959979	.	GGAT	G	513.07	PASS	AC=2;AF=0.100;AN=20;BaseQRankSum=1.633;DP=1006;FS=2.604;HRun=0;HaplotypeScore=52.1813;InbreedingCoeff=0.7311;MQ=9.13;MQ0=807;MQRankSum=-0.748;QD=17.10;ReadPosRankSum=0.249;VQSLOD=2.8651;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/0:23,0:8:18.06:0,18,406	./.	./.	0/0:56,0:6:9.03:0,9,203	./.	./.	./.	./.	0/0:50,0:3:9.03:0,9,203	0/0:46,0:14:36.12:0,36,794	./.	./.	./.	./.	./.	./.	./.	./.	0/0:59,0:21:42.14:0,42,929	./.	0/0:63,0:7:12.04:0,12,271	0/0:65,0:10:27.09:0,27,609	./.	1/1:17,13:13:36.12:598,36,0	0/0:53,0:3:9.03:0,9,175	./.	0/0:19,0:3:6.02:0,6,107
chr10	16962070	.	CA	C	3442.34	PASS	AC=8;AF=0.148;AN=54;BaseQRankSum=8.200;DP=689;FS=12.297;HRun=4;HaplotypeScore=89.3899;InbreedingCoeff=0.9997;MQ=86.19;MQ0=0;MQRankSum=-1.777;QD=32.47;ReadPosRankSum=-0.234;VQSLOD=2.8239;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,156,2137	0/0:9,0:9:27.09:0,27,378	0/0:29,0:29:81.05:0,81,1004	0/0:18,0:18:39.54:0,40,477	0/0:23,0:23:66.22:0,66,924	0/0:24,0:24:66.22:0,66,924	0/0:31,0:31:93.26:0,93,1235	1/1:2,30:32:87.25:1031,87,0	0/0:30,0:30:78.26:0,78,1088	0/0:17,0:17:51.17:0,51,714	0/0:19,0:19:57.18:0,57,779	0/0:34,0:34:96.31:0,96,1327	0/0:21,0:21:63.21:0,63,882	0/0:19,0:19:51.17:0,51,714	0/0:20,0:20:60.20:0,60,840	0/0:20,0:20:60.20:0,60,840	0/0:40,0:40:99:0,111,1553	0/0:28,0:28:81.25:0,81,1116	1/1:2,23:25:69.21:828,69,0	1/1:1,17:18:51.16:612,51,0	1/1:2,29:31:81.25:972,81,0	0/0:23,0:23:66.20:0,66,879	0/0:18,0:18:54.16:0,54,723	0/0:30,0:30:90.28:0,90,1240	0/0:21,0:21:60.20:0,60,840	0/0:31,0:31:87.29:0,87,1218	0/0:24,0:24:66.22:0,66,924	./.
chr10	16963056	.	GA	G	728.42	PASS	AB=0.889;AC=3;AF=0.054;AN=56;BaseQRankSum=5.326;DP=671;FS=4.016;HRun=2;HaplotypeScore=65.7509;InbreedingCoeff=0.6545;MQ=85.94;MQ0=0;MQRankSum=-0.721;QD=24.28;ReadPosRankSum=0.530;VQSLOD=3.4068;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,157,2321	0/1:7,1:8:14.88:15,0,291	0/0:24,0:24:62.68:0,63,796	0/0:26,0:26:41.70:0,42,768	0/0:15,0:15:45.11:0,45,649	0/0:22,0:22:60.20:0,60,897	0/0:38,0:38:99:0,114,1706	0/0:25,0:25:72.24:0,72,1079	0/0:28,0:28:81.26:0,81,1193	0/0:29,0:29:84.28:0,84,1243	0/0:9,0:9:24.05:0,24,340	0/0:18,0:18:54.18:0,54,809	0/0:19,0:19:57.15:0,57,808	0/0:21,0:21:63.21:0,63,942	0/0:24,0:24:72.22:0,72,1055	0/0:33,0:33:99:0,99,1484	0/0:34,0:34:99:0,99,1464	0/0:33,0:33:99:0,99,1431	0/0:20,0:20:60.19:0,60,870	0/0:18,0:18:54.18:0,54,809	0/0:37,0:37:99:0,111,1643	0/0:17,0:17:49.39:0,49,702	0/0:18,0:18:54.18:0,54,809	0/0:31,0:31:90.30:0,90,1332	1/1:0,22:22:63.20:818,63,0	0/0:17,0:17:51.17:0,51,747	0/0:18,0:18:54.18:0,54,808	0/0:15,0:15:42.14:0,42,629
chr10	16964700	.	TG	T	2373.15	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=4.437;DP=581;FS=2.657;HRun=6;HaplotypeScore=150.7435;InbreedingCoeff=0.9951;MQ=83.61;MQ0=0;MQRankSum=-2.047;QD=22.60;ReadPosRankSum=-1.203;VQSLOD=1.5759;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:90.14:0,90,1121	0/0:11,0:11:23.86:0,24,315	0/0:21,0:21:57.16:0,57,695	0/0:21,0:21:51.16:0,51,652	0/0:22,0:22:54.10:0,54,666	0/0:13,0:13:39.13:0,39,513	0/0:17,0:17:39.07:0,39,480	1/1:3,28:31:84.13:866,84,0	0/0:27,0:27:69.17:0,69,871	0/0:21,0:21:51.11:0,51,631	0/0:7,0:7:18.06:0,18,237	0/0:22,0:22:60.19:0,60,786	0/0:16,0:16:36.12:0,36,473	0/0:20,0:20:48.08:0,48,578	0/0:22,0:22:48:0,48,623	0/0:20,0:20:48.10:0,48,603	0/0:23,0:23:51.08:0,51,626	0/0:19,0:19:42.10:0,42,534	1/1:4,16:20:48.11:508,48,0	1/1:1,19:20:44.98:444,45,0	1/1:4,30:32:69.09:716,69,0	0/0:26,0:26:69.06:0,69,833	0/0:12,0:12:23.91:0,24,270	0/0:19,0:19:33.10:0,33,420	0/0:15,0:15:30.10:0,30,394	0/0:28,0:28:78.25:0,78,1013	0/0:26,0:26:69.15:0,69,849	0/0:10,0:10:21.03:0,21,253
chr10	16964739	.	AGACACTG	A	22349.05	PASS	AB=0.767;AC=54;AF=0.964;AN=56;BaseQRankSum=-3.975;DP=502;FS=10.653;HRun=0;HaplotypeScore=153.1819;InbreedingCoeff=-0.0413;MQ=67.55;MQ0=0;MQRankSum=-4.282;QD=44.52;ReadPosRankSum=3.439;VQSLOD=3.8425;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,23:29:54.19:1330,54,0	1/1:1,7:8:15.04:351,15,0	0/1:8,6:13:99:345,0,102	0/1:12,3:15:99:213,0,129	1/1:2,15:17:20.86:517,21,0	1/1:1,17:18:42.14:1034,42,0	1/1:5,19:24:48.13:1182,48,0	1/1:10,12:22:53.96:1012,54,0	1/1:2,26:28:72.25:1773,72,0	1/1:1,13:14:33.10:763,33,0	1/1:0,6:6:12.04:295,12,0	1/1:3,20:23:45.15:1108,45,0	1/1:5,8:13:12.04:295,12,0	1/1:3,14:17:36.12:887,36,0	1/1:1,22:23:51.16:1256,51,0	1/1:1,24:25:54.19:1330,54,0	1/1:6,17:23:39.13:942,39,0	1/1:4,9:13:15.05:369,15,0	1/1:10,7:17:38.94:648,39,0	1/1:4,10:14:33.10:764,33,0	1/1:14,13:24:36.11:837,36,0	1/1:1,14:15:30.10:738,30,0	1/1:0,10:10:21.07:517,21,0	1/1:1,18:19:21.06:517,21,0	1/1:3,10:13:21.07:517,21,0	1/1:8,12:20:36.12:887,36,0	1/1:5,21:26:57.20:1403,57,0	1/1:0,9:9:21.07:517,21,0
chr10	16964746	.	G	GGA	2062.47	PASS	AB=0.981;AC=29;AF=0.518;AN=56;BaseQRankSum=-2.398;DP=492;FS=27.867;HRun=0;HaplotypeScore=203.6412;InbreedingCoeff=-0.2515;MQ=69.37;MQ0=0;MQRankSum=-0.316;QD=4.80;ReadPosRankSum=-11.562;VQSLOD=-0.5330;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:31,0:31:20.28:299,20,0	0/1:8,0:8:29.21:48,0,29	0/1:12,1:12:31.59:32,0,89	0/1:15,2:20:58.98:248,0,59	1/1:15,0:15:0.93:56,1,0	0/1:18,0:18:45.33:45,0,66	0/1:22,0:22:40.83:60,0,41	0/1:26,1:27:74.81:238,0,75	0/1:27,0:27:1.16:1,0,123	0/1:17,0:17:65.18:157,0,65	1/1:7,0:7:12.37:116,12,0	0/0:20,0:20:11.84:0,12,93	0/0:9,0:9:10.81:0,11,47	0/1:15,0:15:4.54:5,0,75	0/1:23,0:23:43.06:43,0,69	0/0:24,0:24:46.34:0,46,192	0/1:21,0:21:81.51:82,0,90	0/1:11,0:11:0.39:0,0,62	0/1:15,0:15:48.15:91,0,48	0/1:15,1:16:4.67:191,0,5	1/1:30,2:29:15.83:184,16,0	0/1:15,0:15:0.31:89,0,0	1/1:10,0:10:14.16:90,14,0	0/1:20,0:20:23.30:26,0,23	0/1:11,0:11:6.09:55,0,6	0/1:15,0:15:10.09:10,0,92	0/1:21,0:21:58.33:58,0,91	0/0:9,0:9:19.21:0,19,82
chr10	16966325	.	AT	A	344.48	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.343;DP=523;FS=0.949;HRun=9;HaplotypeScore=53.9131;InbreedingCoeff=0.9270;MQ=70.08;MQ0=3;MQRankSum=1.526;QD=18.13;ReadPosRankSum=0.378;VQSLOD=3.6963;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:92.65:0,93,1041	0/0:7,0:7:18.05:0,18,208	0/0:13,0:11:13.89:0,14,145	0/0:9,0:8:12.91:0,13,125	0/0:18,0:18:48.05:0,48,526	0/0:22,0:22:60.17:0,60,684	0/0:17,0:17:45.13:0,45,519	0/0:32,0:31:72.20:0,72,820	0/0:18,0:18:42.08:0,42,470	0/0:25,0:25:63.19:0,63,727	0/0:9,0:9:24.07:0,24,277	0/0:11,0:11:24.07:0,24,277	0/0:17,0:17:42.12:0,42,485	0/0:10,0:10:21.06:0,21,242	0/0:22,0:22:54.16:0,54,622	0/0:19,0:19:45.13:0,45,519	0/0:37,0:35:78.23:0,78,897	0/0:22,0:22:57.14:0,57,634	0/0:23,0:21:50.99:0,51,556	0/0:13,0:13:33.06:0,33,366	0/0:23,0:23:60.18:0,60,692	0/0:6,0:6:18.05:0,18,207	0/0:14,0:14:36.11:0,36,415	0/0:15,0:15:36.07:0,36,401	1/1:1,18:19:48.03:439,48,0	0/0:22,0:22:57.17:0,57,658	0/0:33,0:33:90.21:0,90,1013	0/0:6,0:6:18.05:0,18,208
chr10	16966555	.	TCAGCAG	T	1089.83	PASS	AB=0.614;AC=11;AF=0.393;AN=28;BaseQRankSum=4.514;DP=509;FS=6.476;HRun=0;HaplotypeScore=106.4157;InbreedingCoeff=0.6273;MQ=65.91;MQ0=10;MQRankSum=-6.880;QD=7.52;ReadPosRankSum=-0.462;VQSLOD=1.5620;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	./.	1/1:22,0:13:0.47:1,0,0	./.	./.	./.	0/0:30,0:32:45.04:0,45,1178	./.	0/0:14,0:14:5.81:0,6,183	./.	./.	0/0:26,0:28:29.90:0,30,866	0/0:17,0:18:24.01:0,24,620	0/0:25,0:25:30.10:0,30,924	1/1:10,22:28:27.09:517,27,0	0/0:12,0:17:8.78:0,9,59	1/1:23,9:31:5.34:119,5,0	0/1:10,1:27:33.46:33,0,145	./.	./.	0/0:38,0:37:3.01:0,3,48	./.	./.	0/0:38,0:38:72.18:0,72,2151	./.	./.	1/1:13,16:27:21.07:421,21,0	1/1:1,2:2:6.02:120,6,0
chr10	16971401	.	ATG	A	796.65	PASS	AB=0.969;AC=9;AF=0.167;AN=54;BaseQRankSum=2.911;DP=770;FS=10.044;HRun=0;HaplotypeScore=131.9214;InbreedingCoeff=0.1722;MQ=54.14;MQ0=6;MQRankSum=4.424;QD=3.46;ReadPosRankSum=2.750;VQSLOD=1.5744;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:50,2:51:42.65:43,0,588	0/0:9,0:8:2.88:0,3,17	./.	0/0:25,0:8:3.01:0,3,40	0/0:21,0:19:6:0,6,64	0/0:21,2:23:0.34:0,0,410	0/1:32,0:32:0.38:0,0,417	0/0:32,0:32:23.86:0,24,220	0/0:27,0:28:51.14:0,51,726	0/0:32,0:30:29.55:0,30,241	0/0:21,0:21:9.66:0,10,112	0/1:24,1:25:31.19:31,0,381	0/0:27,1:28:5.41:0,5,457	0/0:24,1:25:20.50:0,20,708	0/0:32,0:30:2.78:0,3,18	1/1:11,19:31:53.99:586,54,0	0/0:18,0:18:3.48:0,3,41	1/1:13,7:20:7.10:249,7,0	0/0:15,0:16:4.36:0,4,30	0/0:8,0:20:22.31:0,22,167	0/0:55,0:77:26.99:0,27,256	0/0:28,1:29:46.95:0,47,668	0/1:24,1:24:9.62:10,0,270	0/1:43,2:45:10.66:11,0,1000	0/0:6,0:19:12:0,12,105	0/0:31,0:28:47.12:0,47,451	0/0:19,0:19:17.85:0,18,172	0/0:13,0:12:14.86:0,15,106
chr10	16971439	.	GCACATACA	G	790.57	PASS	AB=0.822;AC=6;AF=0.107;AN=56;BaseQRankSum=5.838;DP=655;FS=42.955;HRun=0;HaplotypeScore=167.6420;InbreedingCoeff=-0.1218;MQ=56.17;MQ0=12;MQRankSum=-5.244;QD=8.98;ReadPosRankSum=-1.750;VQSLOD=1.3106;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:44:99:0,117,5322	0/1:11,1:11:73.98:74,0,674	0/0:31,0:4:12.04:0,12,296	0/0:31,0:8:18.06:0,18,586	0/0:13,2:14:24.08:0,24,1111	0/0:17,0:17:48.16:0,48,2142	0/0:21,0:21:57.20:0,57,2624	0/0:24,0:24:72.25:0,72,3306	0/0:24,0:24:66.23:0,66,2897	0/1:13,5:16:99:210,0,1732	0/1:15,2:17:42.23:42,0,941	0/0:19,0:19:57.20:0,57,2549	0/0:22,0:22:63.22:0,63,2721	0/0:32,0:32:93.32:0,93,3958	0/0:24,5:27:50.84:0,51,2313	0/0:37,0:37:99:0,105,4627	0/0:14,2:16:30:0,30,1233	0/0:19,0:19:54.07:0,54,2069	0/0:10,0:10:30.10:0,30,1340	0/0:25,0:25:58.51:0,59,2436	0/0:49,0:49:93.32:0,93,4187	0/0:27,0:26:72.22:0,72,2886	0/0:14,0:14:42.13:0,42,1779	0/0:42,0:42:99:0,126,5581	0/0:18,0:18:39.13:0,39,1714	0/1:17,3:18:39.43:39,0,2167	0/1:11,3:14:99:214,0,1414	0/1:3,4:7:99:336,0,328
chr10	16973336	.	GTC	G	5732.91	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=9.674;DP=570;FS=0.366;HRun=0;HaplotypeScore=71.8762;InbreedingCoeff=0.9995;MQ=80.98;MQ0=1;MQRankSum=-2.438;QD=35.39;ReadPosRankSum=3.026;VQSLOD=7.1758;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:35:99:0,99,1735	1/1:0,11:11:30.10:412,30,0	0/0:16,0:16:45.63:0,46,774	0/0:16,0:16:38.96:0,39,580	1/1:1,18:19:51.17:689,51,0	0/0:15,0:15:36.09:0,36,589	0/0:29,0:29:75.26:0,75,1302	0/0:21,0:20:54.18:0,54,956	0/0:18,0:18:51.17:0,51,898	1/1:1,23:24:69.21:923,69,0	1/1:1,16:16:42.14:577,42,0	0/0:17,0:17:45.15:0,45,793	0/0:14,0:14:33.09:0,33,541	0/0:12,0:12:33.11:0,33,563	1/1:1,21:22:54.18:742,54,0	0/0:21,0:21:60.21:0,60,1044	1/1:2,25:27:69.23:948,69,0	0/0:37,0:37:96.33:0,96,1673	0/0:14,0:14:39.13:0,39,680	0/0:18,0:18:48.15:0,48,823	0/0:37,0:36:99:0,108,1901	0/0:17,0:17:51.17:0,51,904	0/0:22,0:22:60.21:0,60,1043	0/0:27,0:27:75.22:0,75,1231	0/0:21,0:21:60.21:0,60,1053	1/1:2,14:16:39.13:535,39,0	1/1:2,15:17:42.14:577,42,0	1/1:0,9:9:24.08:330,24,0
chr10	16974443	.	TTTTTTTTTTTTTTTTGGTTCTTTTTTTCGGAGCTGGGGACC	T	12699.07	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=11.274;DP=402;FS=0.000;HRun=0;HaplotypeScore=359.5929;InbreedingCoeff=0.9007;MQ=63.79;MQ0=3;MQRankSum=-6.588;QD=181.42;ReadPosRankSum=7.571;VQSLOD=3.4557;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,129,11697	1/1:0,1:1:3.01:306,3,0	0/0:12,0:7:11.48:0,11,634	0/0:11,0:8:17.43:0,17,805	1/1:0,5:5:11.98:723,12,0	0/0:17,0:17:51.18:0,51,5606	0/0:17,0:17:48.16:0,48,4752	0/0:38,0:38:99:0,114,6374	0/0:18,0:17:42.14:0,42,3939	1/1:0,5:5:15.05:1319,15,0	1/1:0,4:4:5.95:218,6,0	0/0:17,0:17:48.16:0,48,4652	0/0:18,0:18:49.04:0,49,4301	0/0:18,0:17:48.16:0,48,4190	1/1:0,10:10:18.06:1837,18,0	1/1:0,7:7:9.03:918,9,0	1/1:1,7:7:12.04:1224,12,0	1/1:0,7:7:15.05:1531,15,0	0/0:21,0:21:57.20:0,57,3676	0/0:18,0:18:48.15:0,48,4754	0/0:30,0:30:45.12:0,45,2705	0/0:18,0:18:51.16:0,51,4283	0/0:10,0:10:27.94:0,28,1762	0/0:24,0:24:55.96:0,56,5838	1/1:0,2:2:6.02:577,6,0	1/1:0,8:8:21:1292,21,0	1/1:0,7:7:21.07:2143,21,0	1/1:0,6:6:6.02:612,6,0
chr10	16974948	.	G	GCAAAA	10426.74	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-12.394;DP=803;FS=0.000;HRun=0;HaplotypeScore=140.0108;InbreedingCoeff=0.9551;MQ=68.85;MQ0=6;MQRankSum=0.008;QD=42.04;ReadPosRankSum=1.244;VQSLOD=4.5362;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:90.17:0,90,1491	1/1:4,9:13:24.08:675,24,0	0/0:43,0:36:14.81:0,15,212	0/0:47,0:29:0.06:0,0,50	1/1:17,16:34:51.11:1262,51,0	0/0:23,0:23:42.14:0,42,755	0/0:22,0:22:18.03:0,18,266	0/0:35,0:35:28.45:0,28,425	0/0:20,0:20:36.11:0,36,621	1/1:11,7:18:27.08:684,27,0	1/1:10,9:19:25.33:669,25,0	0/0:17,0:17:39.12:0,39,677	0/0:29,0:29:54.17:0,54,943	0/0:29,0:29:54.17:0,54,940	1/1:11,23:34:51.18:1435,51,0	0/0:29,0:29:63.22:0,63,1141	1/1:12,19:32:39.13:1097,39,0	0/0:28,0:27:45.14:0,45,774	0/0:19,0:19:36.03:0,36,577	0/0:23,0:23:33.10:0,33,562	0/0:30,0:30:63.17:0,63,1052	0/0:18,0:18:33.11:0,33,598	0/0:27,0:27:54.17:0,54,949	0/0:42,0:42:96.31:0,96,1692	0/0:28,0:28:33.11:0,33,598	1/1:12,26:41:87.30:2277,87,0	1/1:10,31:42:54.19:1502,54,0	1/1:1,9:14:30.10:824,30,0
chr10	16975298	.	AC	A	487.96	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.333;DP=770;FS=0.993;HRun=2;HaplotypeScore=72.7931;InbreedingCoeff=0.9959;MQ=61.09;MQ0=0;MQRankSum=-0.820;QD=32.53;ReadPosRankSum=1.577;VQSLOD=3.6689;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,108,1613	0/0:8,0:8:24.08:0,24,360	0/0:32,0:31:90.30:0,90,1326	0/0:33,0:33:87.28:0,87,1262	0/0:23,0:23:69.22:0,69,1010	0/0:17,0:17:48.15:0,48,693	0/0:31,0:31:93.30:0,93,1372	0/0:40,0:40:99:0,120,1745	0/0:42,0:42:99:0,126,1838	0/0:23,0:23:69.23:0,69,1029	0/0:20,0:20:60.20:0,60,898	0/0:32,0:32:93.29:0,93,1343	0/0:30,0:30:90.28:0,90,1310	0/0:27,0:27:75.25:0,75,1120	0/0:40,0:40:99:0,120,1797	0/0:37,0:37:99:0,111,1643	0/0:35,0:35:99:0,102,1508	0/0:24,0:24:72.22:0,72,1055	0/0:20,0:20:60.19:0,60,866	0/0:29,0:29:84.27:0,84,1230	0/0:31,0:31:90.30:0,90,1347	0/0:18,0:18:54.18:0,54,809	0/0:14,0:14:39.13:0,39,583	0/0:46,0:46:99:0,138,2041	1/1:1,14:15:45.15:583,45,0	0/0:32,0:32:96.30:0,96,1410	0/0:25,0:25:75.24:0,75,1103	0/0:8,0:8:24.08:0,24,360
chr10	16975337	.	AG	A	371.48	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.838;DP=761;FS=1.117;HRun=2;HaplotypeScore=71.3178;InbreedingCoeff=0.9972;MQ=58.05;MQ0=4;MQRankSum=0.195;QD=24.77;ReadPosRankSum=-0.412;VQSLOD=3.3232;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,108,1597	0/0:10,0:10:27.09:0,27,405	0/0:26,0:15:36.59:0,37,527	0/0:30,0:24:69.22:0,69,994	0/0:27,0:27:81.27:0,81,1213	0/0:24,0:24:72.24:0,72,1079	0/0:33,0:33:99:0,99,1481	0/0:23,0:23:63.20:0,63,926	0/0:36,0:36:99:0,108,1614	0/0:25,0:25:75.25:0,75,1124	0/0:17,0:17:48.14:0,48,681	0/0:29,0:29:81.27:0,81,1213	0/0:25,0:25:72.24:0,72,1063	0/0:32,0:32:96.31:0,96,1420	0/0:44,0:44:99:0,126,1889	0/0:32,0:32:96.33:0,96,1438	0/0:33,0:33:96.33:0,96,1439	0/0:28,0:28:84.27:0,84,1239	0/0:30,0:28:78.24:0,78,1128	0/0:21,0:21:57.18:0,57,833	0/0:44,0:44:99:0,123,1843	0/0:18,0:18:54.17:0,54,787	0/0:10,0:10:27.09:0,27,405	0/0:41,0:41:99:0,120,1771	1/1:1,14:15:36.12:466,36,0	0/0:30,0:30:90.28:0,90,1294	0/0:27,0:27:75.24:0,75,1105	0/0:10,0:10:30.10:0,30,450
chr10	16975783	.	CGTGT	C	436.80	PASS	AB=1.000;AC=13;AF=0.283;AN=46;BaseQRankSum=3.125;DP=499;FS=4.001;HRun=0;HaplotypeScore=80.5446;InbreedingCoeff=0.5540;MQ=68.83;MQ0=9;MQRankSum=-0.030;QD=4.20;ReadPosRankSum=2.259;VQSLOD=1.3117;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:12.04:0,12,249	./.	./.	./.	1/1:13,0:13:5.99:51,6,0	0/0:17,0:17:4.06:0,4,99	0/0:25,0:24:6.02:0,6,123	0/0:22,0:22:0:0,0,0	0/1:12,0:12:8.44:8,0,74	./.	1/1:9,0:9:3.01:46,3,0	0/0:10,0:11:6.02:0,6,122	0/0:15,0:15:6.02:0,6,102	0/0:16,0:17:11.78:0,12,206	1/1:11,2:13:6.02:92,6,0	0/0:6,0:11:6.01:0,6,77	1/1:24,3:28:18.30:239,18,0	0/0:27,0:26:30.88:0,31,549	0/0:16,0:14:5.84:0,6,35	0/0:15,0:15:2.97:0,3,20	0/0:52,0:51:20.75:0,21,303	0/0:10,0:9:11.78:0,12,203	0/0:12,0:12:6.01:0,6,88	0/0:33,0:32:27.06:0,27,423	0/0:11,0:10:9.03:0,9,161	1/1:18,4:22:6:71,6,0	1/1:4,2:7:6.01:73,6,0	./.
chr10	16976993	.	TAC	T	3750.46	PASS	AB=0.989;AC=33;AF=0.611;AN=54;BaseQRankSum=4.389;DP=526;FS=0.000;HRun=0;HaplotypeScore=89.9020;InbreedingCoeff=0.6896;MQ=75.31;MQ0=11;MQRankSum=0.983;QD=13.35;ReadPosRankSum=-0.070;VQSLOD=3.1443;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:28:0.07:0,0,461	1/1:5,1:6:15:160,15,0	0/0:41,0:26:14.37:0,14,161	0/0:44,0:26:24.24:0,24,164	1/1:0,14:14:0.47:1,0,0	0/1:19,0:19:29.77:30,0,456	0/0:25,0:24:33.34:0,33,947	1/1:9,10:19:27.08:323,27,0	0/0:23,0:23:18.32:0,18,734	1/1:4,15:19:45.07:501,45,0	1/1:6,6:13:19.29:205,19,0	0/0:16,0:16:32.17:0,32,410	0/0:23,0:23:12.07:0,12,619	0/1:14,0:14:9.67:10,0,271	1/1:4,14:18:8.89:91,9,0	1/1:13,0:14:15.04:167,15,0	1/1:14,3:17:30.05:338,30,0	1/1:13,0:14:6.37:299,6,0	1/1:6,7:13:21.05:238,21,0	./.	1/1:25,1:24:45.10:534,45,0	0/0:12,0:12:24.07:0,24,348	0/0:19,0:19:3.04:0,3,476	0/0:33,0:33:66.13:0,66,946	1/1:1,8:9:3.01:36,3,0	1/1:7,12:19:36.02:394,36,0	1/1:13,4:17:33.01:352,33,0	1/1:2,0:1:6.02:72,6,0
chr10	16977012	.	ACT	A	2026.74	PASS	AB=0.994;AC=33;AF=0.589;AN=56;BaseQRankSum=11.913;DP=580;FS=3.215;HRun=0;HaplotypeScore=112.3284;InbreedingCoeff=0.2449;MQ=57.88;MQ0=18;MQRankSum=0.209;QD=4.92;ReadPosRankSum=-2.327;VQSLOD=2.5725;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:28:13.87:0,14,343	1/1:8,0:8:21.88:124,22,0	0/1:20,0:9:42.11:42,0,69	0/1:32,0:15:13.39:78,0,13	1/1:19,0:19:5.98:48,6,0	0/0:27,0:27:9.08:0,9,369	0/0:30,0:28:55.85:0,56,724	0/1:15,0:15:27.36:75,0,27	0/0:27,0:25:44.38:0,44,652	1/1:31,0:31:53.35:406,53,0	1/1:19,0:19:22.44:114,22,0	0/1:17,0:17:6.27:6,0,305	0/0:25,0:25:26.71:0,27,530	0/1:17,0:17:25.15:25,0,195	1/1:17,0:17:17.65:123,18,0	0/1:17,0:17:37.87:55,0,38	1/1:14,0:15:10.20:93,10,0	0/1:18,1:19:61.73:124,0,62	1/1:13,0:13:6.29:137,6,0	1/1:4,8:11:2.92:17,3,0	1/1:36,0:32:46.35:221,46,0	0/0:14,0:14:8.53:0,9,234	0/1:21,0:21:8.59:9,0,333	0/1:42,0:42:10.89:11,0,651	0/0:14,0:14:1.29:0,1,54	1/1:22,0:22:49.06:289,49,0	1/1:18,0:18:33.71:191,34,0	1/1:2,0:1:5.49:24,5,0
chr10	16977014	.	TCACACACACACA	T	2359.59	PASS	AB=0.917;AC=15;AF=0.300;AN=50;BaseQRankSum=2.434;DP=582;FS=28.096;HRun=0;HaplotypeScore=198.3976;InbreedingCoeff=0.8039;MQ=57.80;MQ0=18;MQRankSum=-2.648;QD=15.84;ReadPosRankSum=-3.131;VQSLOD=0.8780;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:29:27.09:0,27,1143	1/1:6,1:7:12.04:216,12,0	./.	./.	1/1:16,3:19:6.49:88,6,0	0/0:25,0:26:45.37:0,45,1736	0/0:30,0:28:48.64:0,49,1885	0/0:14,0:15:6.86:0,7,49	0/0:28,0:26:44.81:0,45,1995	1/1:31,0:31:34.78:480,35,0	1/1:5,12:20:11.56:216,12,0	0/0:17,0:17:35.99:0,36,1210	0/0:25,0:27:57.18:0,57,1923	0/0:17,0:18:24.55:0,25,985	1/1:13,4:17:17.61:450,18,0	0/0:15,0:16:19.31:0,19,460	1/1:12,2:14:8.68:243,9,0	0/0:19,0:19:39.13:0,39,1548	0/0:13,0:13:15.05:0,15,358	0/0:12,0:11:6.42:0,6,131	0/0:28,0:32:31.35:0,31,824	0/0:15,0:15:24.05:0,24,737	0/0:22,0:22:36.11:0,36,1070	0/0:39,0:42:64.05:0,64,2890	0/0:14,0:14:12.04:0,12,473	0/1:20,2:22:26.26:417,0,26	1/1:16,3:19:7.87:429,8,0	./.
chr10	16977163	.	ACGCGCG	A	2957.36	PASS	AB=0.984;AC=20;AF=0.357;AN=56;BaseQRankSum=5.071;DP=639;FS=1.465;HRun=0;HaplotypeScore=163.2163;InbreedingCoeff=0.0242;MQ=58.92;MQ0=8;MQRankSum=-1.749;QD=8.91;ReadPosRankSum=-2.460;VQSLOD=2.2217;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:87.30:0,87,2603	0/1:14,0:14:21.18:21,0,66	0/0:24,0:9:17.55:0,18,191	0/1:25,0:9:11.24:11,0,124	0/0:19,0:19:10.48:0,10,88	0/0:22,0:22:54.04:0,54,1593	0/0:19,0:19:47.74:0,48,1573	1/1:5,15:18:42.12:788,42,0	0/0:27,0:27:69.24:0,69,1951	0/1:20,0:20:99:127,0,428	0/1:14,0:14:59.56:83,0,60	0/0:23,0:24:65.84:0,66,1330	0/0:23,0:23:53.75:0,54,1588	0/0:25,0:25:69.22:0,69,1976	0/1:26,0:26:22.99:23,0,290	0/1:23,2:26:99:258,0,255	0/1:20,0:20:11.59:12,0,133	0/1:9,1:9:20.37:284,0,20	1/1:4,7:10:21.03:367,21,0	1/1:5,24:30:33.10:689,33,0	1/1:9,33:41:0.94:2,1,0	0/0:24,0:24:66.21:0,66,1861	0/0:21,0:21:48.88:0,49,1517	0/0:46,0:46:99:0,132,3801	0/1:24,0:24:99:153,0,102	0/1:24,0:24:99:199,0,341	0/1:17,0:17:54.09:54,0,195	0/1:9,0:9:62.46:62,0,176
chr10	16977166	.	C	CGTGT	972.67	PASS	AB=0.959;AC=15;AF=0.268;AN=56;BaseQRankSum=8.069;DP=623;FS=0.591;HRun=0;HaplotypeScore=154.4062;InbreedingCoeff=-0.1694;MQ=57.93;MQ0=8;MQRankSum=-6.004;QD=3.67;ReadPosRankSum=-3.687;VQSLOD=1.6966;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:93.26:0,93,1721	0/1:13,0:13:38.08:38,0,109	0/0:23,0:8:17.97:0,18,235	0/0:24,0:8:15.31:0,15,145	0/0:19,0:19:11.62:0,12,144	0/0:21,0:21:54.10:0,54,996	0/0:21,0:21:60.17:0,60,1095	0/1:15,0:14:17.46:135,0,17	0/0:28,0:28:75.17:0,75,1333	0/0:19,0:19:17:0,17,458	0/1:14,0:14:11.41:11,0,176	0/0:24,0:24:66.22:0,66,1145	0/0:24,0:24:54.03:0,54,1010	0/0:24,0:24:69.22:0,69,1310	0/1:24,0:24:99:99,0,144	0/1:7,15:25:46.39:468,0,46	0/1:17,0:17:15.46:15,0,118	1/1:10,0:9:0.94:39,1,0	0/1:8,0:8:31.91:32,0,32	0/1:25,0:27:1.98:2,0,120	0/1:37,0:37:0.02:0,0,0	0/0:26,0:26:72.20:0,72,1277	0/0:20,0:20:60.14:0,60,1042	0/0:48,0:48:99:0,132,2500	0/1:20,0:23:99:111,0,189	0/1:23,0:23:43.47:43,0,477	0/1:17,0:17:47.32:47,0,139	0/1:9,0:9:79.49:79,0,209
chr10	16977168	.	C	CGTGTGT	2744.20	PASS	AB=0.854;AC=22;AF=0.393;AN=56;BaseQRankSum=8.046;DP=626;FS=1.067;HRun=0;HaplotypeScore=167.0006;InbreedingCoeff=0.4740;MQ=57.59;MQ0=8;MQRankSum=-4.825;QD=9.12;ReadPosRankSum=-3.745;VQSLOD=1.4273;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,105,2164	1/1:13,0:13:3.70:91,4,0	0/0:22,0:7:12.01:0,12,182	0/0:23,0:7:19.83:0,20,172	0/1:8,11:22:0.02:1,0,0	0/0:21,0:21:54.17:0,54,1238	0/0:21,0:21:63.15:0,63,1320	0/1:16,0:14:45.59:57,0,46	0/0:28,0:28:78.22:0,78,1660	1/1:9,1:23:6.54:303,7,0	0/1:6,7:15:2.33:92,0,2	0/0:23,0:23:59.28:0,59,1161	0/0:23,0:23:57.56:0,58,1249	0/0:25,0:25:66.21:0,66,1528	1/1:8,13:26:14.55:481,15,0	0/1:22,0:22:53.39:397,0,53	0/1:7,13:22:19.64:92,0,20	0/1:9,0:8:4.65:15,0,5	0/0:9,0:7:9.75:0,10,56	0/1:27,0:27:52.60:53,0,162	0/1:34,0:33:0.01:1,0,0	0/0:25,0:25:68.79:0,69,1499	0/0:19,0:19:57.14:0,57,1199	0/0:48,0:48:99:0,132,2957	1/1:21,0:21:25.82:468,26,0	1/1:21,3:24:12.93:421,13,0	1/1:16,1:18:7.70:226,8,0	1/1:6,1:9:9.49:231,9,0
chr10	16977170	.	C	CGTGTGT	2900.28	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=8.360;DP=649;FS=1.055;HRun=0;HaplotypeScore=175.6222;InbreedingCoeff=0.4759;MQ=54.91;MQ0=9;MQRankSum=-5.519;QD=9.39;ReadPosRankSum=-3.358;VQSLOD=2.3377;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,102,1874	1/1:4,7:13:0.02:88,0,0	0/0:21,0:6:8.09:0,8,100	0/0:24,0:8:3.61:0,4,106	0/0:20,0:20:0.87:0,1,1	0/0:20,0:20:51.17:0,51,984	0/0:25,0:25:69.09:0,69,1176	0/1:22,0:20:2.81:3,0,113	0/0:28,0:28:78.16:0,78,1398	1/1:24,0:24:33.13:528,33,0	1/1:14,0:14:4.21:116,4,0	0/1:24,0:24:3.55:4,0,527	0/0:23,0:23:57.11:0,57,1070	0/0:26,0:26:69.16:0,69,1234	1/1:23,0:23:13.77:480,14,0	0/1:23,0:23:52.90:403,0,53	0/1:21,0:21:20.23:91,0,20	0/0:9,0:8:3.03:0,3,10	0/0:13,0:11:5.78:0,6,63	0/1:28,0:28:31.73:32,0,188	1/1:43,0:42:0.46:1,0,0	0/0:24,0:24:62.78:0,63,1204	0/0:20,0:20:51.14:0,51,912	0/0:48,0:48:99:0,132,2515	1/1:20,0:20:25.20:398,25,0	1/1:25,0:25:9.89:439,10,0	1/1:7,11:19:9.51:254,10,0	1/1:10,0:9:10.75:244,11,0
chr10	16978741	.	ATG	A	791.82	PASS	AB=0.938;AC=3;AF=0.054;AN=56;BaseQRankSum=8.419;DP=1078;FS=14.465;HRun=0;HaplotypeScore=152.7609;InbreedingCoeff=0.7667;MQ=54.77;MQ0=14;MQRankSum=-0.548;QD=12.37;ReadPosRankSum=-1.212;VQSLOD=2.3617;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:67.77:0,68,1063	0/0:20,0:20:55.05:0,55,839	0/0:37,0:10:11.99:0,12,274	0/0:64,0:21:43.88:0,44,595	0/0:36,0:36:90.29:0,90,1474	0/0:35,0:35:87:0,87,1439	0/0:39,0:39:99:0,105,1680	0/0:50,0:47:99:0,101,1677	0/0:38,0:38:93.30:0,93,1498	0/0:47,0:46:99:0,104,1882	0/0:36,0:36:92.90:0,93,1500	0/0:38,1:39:99:0,108,1764	0/0:29,0:29:78.21:0,78,1208	0/0:36,0:36:99:0,102,1677	0/0:48,0:48:99:0,123,2004	0/0:42,0:41:90.29:0,90,1458	0/0:30,0:30:60.13:0,60,958	0/0:26,0:26:62.19:0,62,920	0/0:27,0:27:35.27:0,35,774	0/0:39,0:39:96.33:0,96,1590	0/0:94,0:93:99:0,228,3639	0/0:42,0:42:99:0,111,1763	0/0:29,0:29:65.21:0,65,1076	0/1:28,2:30:0.22:0,0,1063	1/1:28,6:32:72.68:886,73,0	0/0:39,1:40:69.72:0,70,1614	0/0:34,0:34:64.80:0,65,1351	0/0:24,0:24:49.91:0,50,815
chr10	16978763	.	A	ATG	3064.07	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-2.282;DP=1117;FS=4.828;HRun=0;HaplotypeScore=158.9939;InbreedingCoeff=0.9630;MQ=56.62;MQ0=10;MQRankSum=0.308;QD=29.46;ReadPosRankSum=1.580;VQSLOD=5.2394;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:61.07:0,61,742	0/0:20,0:20:48.15:0,48,604	0/0:38,0:18:29.31:0,29,321	0/0:56,0:26:29.45:0,29,425	0/0:39,0:39:96.29:0,96,1193	0/0:31,0:31:78.04:0,78,956	0/0:40,0:40:99:0,102,1263	0/0:52,0:49:99:0,111,1321	0/0:37,0:37:99:0,105,1309	0/0:55,0:55:99:0,129,1596	0/0:41,0:41:99:0,108,1302	0/0:42,0:42:99:0,102,1285	0/0:38,0:38:99:0,99,1204	0/0:42,0:42:99:0,105,1268	0/0:46,0:47:99:0,108,1284	1/1:5,36:40:8.80:1221,9,0	0/0:29,0:29:65.96:0,66,798	1/1:5,21:26:23.29:723,23,0	0/0:24,0:23:47.10:0,47,566	0/0:33,0:33:75.24:0,75,946	0/0:108,0:108:99:0,252,3146	0/0:42,0:42:99:0,111,1385	0/0:34,0:34:80.29:0,80,1050	0/0:32,0:32:76.78:0,77,936	1/1:30,7:34:12.06:1253,12,0	0/0:35,0:36:96.14:0,96,1187	0/0:37,0:37:83.92:0,84,1014	0/0:26,0:26:19.43:0,19,658
chr10	16978948	.	GTA	G	472.65	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.320;DP=1090;FS=12.712;HRun=0;HaplotypeScore=207.9972;InbreedingCoeff=0.9989;MQ=59.01;MQ0=9;MQRankSum=-3.105;QD=21.48;ReadPosRankSum=-2.287;VQSLOD=2.0843;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,1:32:65.27:0,65,1081	0/0:12,0:12:30.10:0,30,519	0/0:43,0:25:44.84:0,45,805	0/0:41,0:30:51.26:0,51,797	0/0:34,0:34:90.25:0,90,1470	0/0:27,0:27:75.26:0,75,1293	0/0:25,0:25:63.18:0,63,1027	0/0:46,0:45:99:0,119,1768	0/0:55,0:55:99:0,147,2485	0/0:60,0:60:99:0,159,2614	0/0:35,0:35:87.16:0,87,1263	0/0:50,0:50:99:0,124,2198	0/0:52,0:52:99:0,138,2262	0/0:51,0:51:99:0,150,2507	0/0:68,0:67:99:0,150,2394	0/0:50,0:50:99:0,129,2140	0/0:32,0:32:75.21:0,75,1219	0/0:34,0:31:78.25:0,78,1314	0/0:17,0:14:30.10:0,30,520	0/0:31,0:31:81.18:0,81,1259	0/0:67,0:67:99:0,150,2503	0/0:32,0:32:93.21:0,93,1437	0/0:24,0:24:72.23:0,72,1212	0/0:45,0:45:99:0,120,1952	1/1:6,16:20:45.12:568,45,0	0/0:46,0:46:99:0,123,1999	0/0:35,0:34:78.23:0,78,1288	0/0:23,0:23:45.13:0,45,748
chr10	16978976	.	A	ATG	23696.15	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=-12.494;DP=1050;FS=9.088;HRun=0;HaplotypeScore=143.7926;InbreedingCoeff=0.9995;MQ=58.64;MQ0=9;MQRankSum=-0.647;QD=39.36;ReadPosRankSum=2.159;VQSLOD=6.0258;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:87.27:0,87,1173	1/1:1,14:15:33.11:579,33,0	0/0:33,0:20:22.48:0,22,439	0/0:28,0:20:34.57:0,35,533	1/1:1,35:35:93.32:1630,93,0	0/0:29,0:29:75.24:0,75,998	0/0:21,0:21:44.89:0,45,608	1/1:10,45:56:99:2324,138,0	0/0:54,0:54:99:0,147,1973	1/1:3,52:55:99:2674,154,0	1/1:0,24:24:66.23:1156,66,0	0/0:44,0:44:99:0,120,1623	0/0:49,0:49:99:0,135,1806	0/0:49,0:49:99:0,126,1704	1/1:4,66:70:99:2787,160,0	1/1:42,6:48:42.20:1734,42,0	1/1:10,24:34:56.56:954,57,0	1/1:28,3:30:78.06:1160,78,0	1/1:2,13:14:39.13:684,39,0	1/1:3,21:23:39.13:683,39,0	1/1:7,64:71:99:2524,144,0	0/0:35,0:35:99:0,99,1321	0/0:23,0:23:57.17:0,57,752	0/0:47,0:46:99:0,114,1542	1/1:0,23:21:51.17:892,51,0	1/1:1,38:39:99:1921,114,0	1/1:5,26:31:57.20:998,57,0	1/1:3,24:26:57.20:996,57,0
chr10	16978982	.	GCA	G	1277.87	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.748;DP=1070;FS=19.093;HRun=0;HaplotypeScore=223.2025;InbreedingCoeff=0.9001;MQ=58.70;MQ0=9;MQRankSum=-0.300;QD=15.78;ReadPosRankSum=0.596;VQSLOD=2.2871;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:90.24:0,90,1750	0/0:17,0:17:41.46:0,41,464	0/0:39,0:25:68.71:0,69,1103	0/0:35,1:26:64.48:0,64,1043	0/0:37,0:36:97.93:0,98,971	0/0:27,0:27:81.28:0,81,1597	0/0:22,0:22:60.19:0,60,1160	0/0:57,0:56:70.28:0,70,1494	0/0:54,0:54:99:0,163,3192	0/0:64,0:64:99:0,152,1849	0/0:27,0:27:71.63:0,72,723	0/0:47,1:48:99:0,119,2731	0/0:48,0:48:99:0,141,2762	0/0:48,0:48:99:0,141,2700	0/0:67,0:66:99:0,168,1712	1/1:42,1:43:3.55:814,4,0	0/0:28,3:31:13.67:0,14,542	1/1:35,2:35:33.46:573,33,0	0/0:20,0:18:47.95:0,48,572	0/0:24,0:23:48.11:0,48,535	0/0:68,0:68:99:0,156,1538	0/0:35,0:35:99:0,102,2058	0/0:21,0:21:63.20:0,63,1186	0/0:46,0:45:99:0,126,2424	0/0:25,0:23:54.99:0,55,585	0/0:38,0:38:91.99:0,92,1090	0/0:29,0:28:65.44:0,65,681	0/0:25,0:24:56.47:0,56,540
chr10	16978984	.	ATG	A	1952.17	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.930;DP=1073;FS=10.364;HRun=0;HaplotypeScore=221.2637;InbreedingCoeff=1.0000;MQ=58.54;MQ0=9;MQRankSum=-2.149;QD=24.40;ReadPosRankSum=2.343;VQSLOD=3.1821;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:87.25:0,87,1471	0/0:18,0:18:42.14:0,42,719	0/0:40,0:26:62.01:0,62,964	0/0:36,0:26:49.90:0,50,850	0/0:36,0:35:96.33:0,96,1643	0/0:26,0:26:75.26:0,75,1278	0/0:22,0:22:57.18:0,57,975	0/0:56,0:55:99:0,138,2285	0/0:54,0:54:99:0,150,2519	0/0:67,0:67:99:0,178,3013	0/0:28,0:28:75.26:0,75,1266	0/0:50,0:50:99:0,116,2289	0/0:49,0:49:99:0,135,2254	0/0:47,0:47:99:0,114,1960	0/0:63,0:62:99:0,169,2895	1/1:37,7:44:61.95:1211,62,0	0/0:31,0:31:56.16:0,56,1021	1/1:30,6:33:72.65:863,73,0	0/0:20,0:18:45.15:0,45,777	0/0:25,0:24:51.17:0,51,870	0/0:68,0:68:99:0,163,2693	0/0:35,0:35:99:0,102,1758	0/0:20,0:20:60.21:0,60,1020	0/0:48,0:47:99:0,117,1986	0/0:25,0:23:54.18:0,54,924	0/0:39,0:39:99:0,105,1812	0/0:28,0:27:63.15:0,63,1075	0/0:23,0:22:54.18:0,54,922
chr10	16978992	.	GTA	G	496.83	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=11.673;DP=1092;FS=11.267;HRun=0;HaplotypeScore=223.4336;InbreedingCoeff=0.6476;MQ=58.61;MQ0=9;MQRankSum=-3.614;QD=5.91;ReadPosRankSum=3.125;VQSLOD=1.8163;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:91.45:0,91,1620	0/0:16,0:16:42.14:0,42,809	0/0:46,0:30:75.76:0,76,1245	0/0:47,0:28:58.02:0,58,912	0/0:35,0:34:99:0,102,1819	0/0:26,0:26:78.18:0,78,1313	0/0:22,0:22:63.14:0,63,1058	0/0:53,0:52:99:0,150,2558	0/0:57,0:57:99:0,165,2830	0/0:64,0:64:99:0,187,3345	0/0:29,0:29:84.13:0,84,1365	0/0:53,0:53:99:0,145,2545	0/0:46,0:46:99:0,138,2365	0/0:46,0:46:99:0,135,2277	0/0:68,0:67:99:0,181,3263	0/1:48,0:48:81.05:299,0,81	0/0:26,3:29:42.32:0,42,1126	1/1:34,2:33:34.10:304,34,0	0/0:20,0:18:54.12:0,54,930	0/0:24,0:23:63.16:0,63,1062	0/0:65,0:65:99:0,174,3025	0/0:41,0:41:99:0,120,2055	0/0:22,0:22:66.16:0,66,1125	0/0:48,0:47:99:0,132,2196	0/0:26,0:24:54.18:0,54,975	0/0:38,0:38:99:0,114,2065	0/0:28,0:28:78.11:0,78,1347	0/0:22,0:21:60.19:0,60,1072
chr10	16979165	.	ATGTGTG	A	5056.40	PASS	AB=0.766;AC=17;AF=0.315;AN=54;BaseQRankSum=11.023;DP=975;FS=10.630;HRun=0;HaplotypeScore=266.4090;InbreedingCoeff=0.4548;MQ=52.85;MQ0=16;MQRankSum=-8.161;QD=13.31;ReadPosRankSum=-3.897;VQSLOD=2.1541;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:40:92.14:0,92,2070	0/1:5,9:15:37.53:112,0,38	0/0:24,0:9:9:0,9,92	./.	0/1:14,17:30:0.33:0,0,2	0/0:20,0:23:36.12:0,36,908	0/0:29,0:29:57.06:0,57,1513	0/0:35,0:32:29.85:0,30,237	0/0:39,0:44:70.52:0,71,1646	1/1:24,21:45:57.07:1059,57,0	0/0:2,10:12:0:0,0,1	0/0:35,0:38:74.25:0,74,1811	0/0:54,0:55:99:0,113,3177	0/0:35,0:41:96.02:0,96,2318	1/1:17,28:46:32.33:670,32,0	1/1:9,0:48:63.20:809,63,0	0/1:17,5:24:3.51:448,0,4	0/1:15,0:21:76.75:227,0,77	0/1:22,0:22:26.27:26,0,71	0/1:37,0:37:16.04:16,0,35	0/0:69,0:68:9.44:0,9,74	0/0:32,0:37:66.21:0,66,1874	0/0:27,0:28:63.02:0,63,1586	0/0:54,0:58:99:0,129,3535	0/0:16,0:26:21.32:0,21,237	1/1:18,20:38:54.15:954,54,0	1/1:10,21:30:23.41:500,23,0	0/1:5,16:19:15.69:234,0,16
chr10	16979176	.	TGTGTGTGTGTGTGTGTGTGC	T	960.11	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=1.164;DP=935;FS=2.234;HRun=0;HaplotypeScore=466.0894;InbreedingCoeff=0.6548;MQ=50.93;MQ0=17;MQRankSum=-0.343;QD=7.01;ReadPosRankSum=-1.866;VQSLOD=0.4162;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:88.18:0,88,5522	0/0:14,0:14:12.50:0,12,417	0/0:34,0:10:12.04:0,12,395	0/0:42,0:6:3.01:0,3,56	0/0:27,0:26:2.77:0,3,128	0/0:21,0:21:42.14:0,42,2720	0/0:36,0:36:84.29:0,84,5460	0/1:22,0:19:61:68,0,61	0/0:40,0:40:87.25:0,87,5437	0/0:44,0:44:89.83:0,90,3469	0/0:13,0:12:0:0,0,1	0/0:38,0:38:87.30:0,87,5674	0/0:50,0:50:99:0,129,8764	0/0:41,0:41:99:0,102,6876	0/0:44,0:44:45.63:0,46,1759	0/0:45,0:45:66.16:0,66,1373	0/0:24,0:24:35.22:0,35,924	0/0:21,0:21:43.80:0,44,880	1/1:17,6:22:14.90:314,15,0	1/1:11,24:35:6.41:303,6,0	1/1:51,6:56:10.39:410,10,0	0/0:32,0:32:66.23:0,66,4793	0/0:27,0:27:57.15:0,57,4082	0/0:60,0:58:99:0,144,10487	0/0:19,0:18:33.11:0,33,1947	0/0:34,0:34:60.68:0,61,2309	0/0:30,0:28:30.10:0,30,1331	0/0:22,0:20:18.06:0,18,690
chr10	16980718	.	GT	G	2309.20	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=9.925;DP=682;FS=15.033;HRun=8;HaplotypeScore=76.2022;InbreedingCoeff=0.9651;MQ=74.05;MQ0=1;MQRankSum=-0.290;QD=21.19;ReadPosRankSum=-2.753;VQSLOD=1.8595;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,141,1703	0/0:12,0:12:30.09:0,30,362	0/0:28,0:24:29.81:0,30,452	0/0:34,0:26:9.65:0,10,473	0/0:24,0:24:60.18:0,60,724	0/0:13,0:13:36.10:0,36,424	0/0:20,0:20:58.73:0,59,692	1/1:9,25:34:74.95:714,75,0	0/0:14,0:14:36.11:0,36,434	0/0:18,0:18:54.14:0,54,630	0/0:25,0:25:66.20:0,66,797	0/0:18,0:18:39.12:0,39,470	0/0:23,0:23:60.14:0,60,708	0/0:16,0:16:42.12:0,42,496	0/0:28,0:28:72.20:0,72,846	0/0:19,0:19:54.17:0,54,652	0/0:49,0:49:99:0,147,1730	0/0:31,0:30:56.09:0,56,946	1/1:4,21:25:60.06:569,60,0	1/1:3,22:25:63.09:607,63,0	1/1:2,23:25:60.10:579,60,0	0/0:16,0:16:36.11:0,36,435	0/0:22,0:22:54.14:0,54,629	0/0:23,0:23:63.19:0,63,760	0/0:25,0:25:69.20:0,69,822	0/0:26,0:26:57.17:0,57,684	0/0:27,0:27:75.22:0,75,890	0/0:9,0:9:7.73:0,8,170
chr10	16980888	.	GCA	G	1525.04	PASS	AB=0.917;AC=28;AF=0.583;AN=48;BaseQRankSum=6.937;DP=517;FS=20.679;HRun=0;HaplotypeScore=79.0946;InbreedingCoeff=0.2841;MQ=62.94;MQ0=9;MQRankSum=-0.591;QD=5.07;ReadPosRankSum=1.457;VQSLOD=0.9941;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:27:3.93:0,4,185	1/1:6,3:9:9.02:98,9,0	./.	./.	0/0:15,0:15:11.87:0,12,127	0/1:11,2:13:23.49:23,0,77	0/0:20,0:21:18.89:0,19,346	./.	0/1:12,0:14:13.47:13,0,147	0/1:15,0:15:18.26:18,0,38	1/1:9,4:13:12.03:130,12,0	0/0:15,0:15:6.92:0,7,248	0/1:14,0:15:13.97:14,0,161	0/1:11,1:13:28.59:29,0,154	1/1:16,9:25:30.07:299,30,0	0/1:12,0:13:8.08:8,0,39	1/1:18,12:29:24.22:260,24,0	1/1:17,0:26:19.89:98,20,0	0/1:9,0:12:11.83:19,0,12	1/1:10,0:15:11.36:56,11,0	./.	0/0:11,0:11:17.57:0,18,189	0/1:19,0:19:4.84:5,0,241	0/0:21,0:22:17.65:0,18,258	1/1:11,0:20:11.36:56,11,0	1/1:18,5:23:17.16:182,17,0	1/1:9,7:16:18.05:195,18,0	1/1:3,6:9:18.05:195,18,0
chr10	16982379	.	CT	C	4150.71	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=10.543;DP=649;FS=8.052;HRun=5;HaplotypeScore=64.2184;InbreedingCoeff=0.9964;MQ=90.47;MQ0=0;MQRankSum=-1.316;QD=29.03;ReadPosRankSum=-0.322;VQSLOD=3.6258;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,132,1738	0/0:6,0:6:15.04:0,15,188	0/0:24,0:24:66.07:0,66,733	0/0:28,0:28:74.55:0,75,875	0/0:16,0:16:42.13:0,42,558	0/0:20,0:20:60.18:0,60,790	0/0:20,0:20:54.16:0,54,708	1/1:4,25:29:75.18:830,75,0	0/0:29,0:29:84.28:0,84,1147	0/0:19,0:19:54.17:0,54,720	0/0:15,0:15:39.13:0,39,522	0/0:29,0:29:78.24:0,78,1036	0/0:27,0:27:78.24:0,78,1046	0/0:21,0:21:60.20:0,60,809	0/0:27,0:27:75.24:0,75,1009	1/1:1,23:24:25.16:673,25,0	0/0:33,0:33:96.31:0,96,1297	1/1:1,12:13:33.09:374,33,0	1/1:0,18:18:54.09:574,54,0	1/1:0,22:22:63.18:714,63,0	1/1:1,36:37:87.25:986,87,0	0/0:16,0:16:48.15:0,48,636	0/0:18,0:18:51.13:0,51,649	0/0:31,0:31:87.28:0,87,1174	0/0:20,0:20:48.16:0,48,656	0/0:25,0:25:75.24:0,75,1012	0/0:21,0:21:60.18:0,60,790	0/0:17,0:17:45.12:0,45,595
chr10	16983263	.	GGAA	G	782.52	PASS	AB=0.922;AC=21;AF=0.389;AN=54;BaseQRankSum=0.193;DP=221;FS=7.199;HRun=0;HaplotypeScore=89.3741;InbreedingCoeff=-0.4062;MQ=41.46;MQ0=14;MQRankSum=-1.491;QD=4.55;ReadPosRankSum=1.890;VQSLOD=1.3500;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:23.85:0,24,209	0/1:5,0:5:36.26:36,0,42	0/0:4,0:2:7.06:0,7,43	./.	0/0:2,0:2:2.89:0,3,19	0/1:6,1:7:58.08:58,0,135	0/1:8,1:9:22.96:23,0,71	0/1:9,0:9:0.25:0,0,75	0/1:10,1:9:37.59:38,0,86	0/1:7,1:7:31.81:32,0,104	1/1:3,0:3:1.82:5,2,0	0/1:12,1:13:98.11:98,0,135	0/1:12,2:14:95.42:95,0,193	0/1:6,2:9:60.61:167,0,61	0/0:2,0:2:5.05:0,5,42	0/1:10,3:13:99:116,0,166	0/0:5,0:3:5.89:0,6,59	0/0:3,0:3:8.94:0,9,94	0/1:7,0:6:10.47:10,0,78	0/1:7,1:9:34.50:57,0,34	0/1:25,0:24:3.04:3,0,123	0/1:9,1:10:31.73:32,0,167	0/1:6,0:6:13.64:14,0,43	0/0:5,0:3:3.01:0,3,45	0/1:4,0:2:2.57:3,0,19	0/0:13,0:9:26.17:0,26,274	1/1:3,1:4:2.99:96,3,0	0/1:4,1:5:42.75:43,0,67
chr10	16983277	.	GGAC	G	486.34	PASS	AB=0.963;AC=19;AF=0.339;AN=56;BaseQRankSum=2.987;DP=307;FS=1.424;HRun=0;HaplotypeScore=112.4130;InbreedingCoeff=-0.3615;MQ=42.94;MQ0=18;MQRankSum=-2.783;QD=2.42;ReadPosRankSum=0.631;VQSLOD=1.7474;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:9,1:10:25.84:26,0,382	0/1:7,1:6:56.14:116,0,56	0/1:10,0:3:2.58:3,0,69	0/1:11,0:3:0.76:1,0,30	0/0:3,1:4:8.83:0,9,92	0/0:10,0:9:12.28:0,12,277	0/1:11,0:11:17.45:17,0,321	0/0:25,0:25:44.32:0,44,471	0/1:11,2:11:90.35:90,0,150	0/0:11,0:10:0.77:0,1,249	0/1:4,0:4:0.23:0,0,15	0/1:13,1:14:61.62:62,0,210	0/1:15,1:16:62.52:63,0,455	0/1:15,0:15:44.17:44,0,179	0/0:5,0:5:6.02:0,6,141	0/1:17,0:17:44.89:45,0,229	0/0:8,0:6:18.06:0,18,402	0/0:3,0:3:2.44:0,2,89	0/1:11,0:9:2.56:3,0,121	0/1:11,0:11:6.58:7,0,92	0/0:29,0:28:34.94:0,35,293	0/1:12,0:12:34.87:35,0,254	0/1:7,1:8:8.01:8,0,193	0/0:6,1:5:5.93:0,6,88	1/1:5,1:4:4.08:56,4,0	0/1:14,1:10:41.97:42,0,447	0/1:8,0:8:14.17:14,0,157	0/0:4,0:4:11.07:0,11,183
chr10	16983441	.	C	CCTG	317.35	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-1.943;DP=469;FS=7.364;HRun=0;HaplotypeScore=67.0973;InbreedingCoeff=0.8676;MQ=85.45;MQ0=0;MQRankSum=-0.218;QD=39.67;ReadPosRankSum=2.285;VQSLOD=4.4459;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:93.23:0,93,1465	0/0:9,0:9:27.09:0,27,438	0/0:16,0:16:39.13:0,39,613	0/0:16,0:16:45.15:0,45,715	0/0:5,0:5:15.05:0,15,250	0/0:13,0:13:33.10:0,33,524	0/0:23,0:23:69.24:0,69,1149	0/0:24,0:24:60.20:0,60,958	0/0:19,0:19:51.16:0,51,819	0/0:19,0:19:51.13:0,51,799	0/0:3,0:3:9.03:0,9,150	0/0:15,0:15:42.14:0,42,699	0/0:16,0:16:48.16:0,48,784	0/0:12,0:12:30.09:0,30,474	0/0:9,0:9:24.08:0,24,395	0/0:16,0:16:42.14:0,42,699	0/0:31,0:31:90.27:0,90,1437	0/0:20,0:20:57.17:0,57,910	0/0:13,0:13:33.11:0,33,550	0/0:9,0:9:27.09:0,27,450	0/0:63,0:63:99:0,178,2934	0/0:9,0:9:27.09:0,27,450	0/0:4,0:4:12.04:0,12,199	0/0:27,0:27:81.23:0,81,1314	1/1:0,7:8:18.06:408,18,0	0/0:15,0:15:45.14:0,45,726	0/0:15,0:15:42.10:0,42,670	0/0:4,0:4:12.04:0,12,200
chr10	16985512	.	GAAAA	G	3907.80	PASS	AB=0.561;AC=22;AF=0.393;AN=56;BaseQRankSum=6.051;DP=537;FS=23.145;HRun=16;HaplotypeScore=103.0596;InbreedingCoeff=0.7156;MQ=72.12;MQ0=2;MQRankSum=-3.004;QD=16.08;ReadPosRankSum=6.140;VQSLOD=-0.0963;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:57:99:0,139,2739	1/1:6,7:13:17.98:236,18,0	0/0:32,0:16:23.25:0,23,310	0/0:23,0:20:25.30:0,25,338	1/1:5,8:16:21.91:247,22,0	0/0:16,0:17:34.15:0,34,786	0/0:16,0:19:48.08:0,48,980	0/1:9,1:34:52.11:79,0,52	0/0:16,0:19:39.13:0,39,762	1/1:5,15:20:45.03:575,45,0	1/1:3,14:19:33.98:401,34,0	0/0:13,0:13:21.07:0,21,447	0/0:12,0:16:33.11:0,33,582	0/0:10,0:12:30.10:0,30,573	1/1:2,14:17:31.21:358,31,0	0/0:6,0:14:26.52:0,27,188	1/1:5,12:17:30:394,30,0	0/0:7,0:18:32.30:0,32,200	0/1:4,1:17:29.68:44,0,30	0/1:0,1:11:36.96:37,0,39	0/1:7,0:21:5.54:6,0,11	0/0:10,0:10:27.09:0,27,545	0/0:14,0:18:48.16:0,48,947	0/0:11,0:15:36.12:0,36,727	0/0:3,0:9:20.90:0,21,242	1/1:5,14:20:43.17:539,43,0	1/1:2,14:17:27.86:357,28,0	1/1:1,19:21:49.36:634,49,0
chr10	16989288	.	C	CTGTG	1184.57	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-5.158;DP=759;FS=14.052;HRun=0;HaplotypeScore=140.6529;InbreedingCoeff=0.9916;MQ=84.96;MQ0=0;MQRankSum=-1.912;QD=45.56;ReadPosRankSum=3.095;VQSLOD=3.8682;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,111,1974	0/0:13,0:13:33.11:0,33,616	0/0:25,0:25:72.25:0,72,1336	0/0:23,0:23:62.13:0,62,1048	0/0:21,0:21:57.18:0,57,1016	0/0:21,0:21:57.05:0,57,858	0/0:20,0:20:60.21:0,60,1109	0/0:16,0:16:42.14:0,42,781	0/0:32,0:32:90.30:0,90,1644	0/0:20,0:20:57.18:0,57,1005	0/0:7,0:7:21.06:0,21,361	0/0:45,0:45:99:0,123,2288	0/0:38,0:38:99:0,105,1943	0/0:29,0:29:84.28:0,84,1538	0/0:36,0:36:99:0,105,1852	0/0:21,0:21:57.20:0,57,1064	0/0:43,0:43:99:0,120,2227	0/0:33,0:33:96.33:0,96,1791	0/0:22,0:22:60.18:0,60,1034	0/0:21,0:21:54.14:0,54,905	0/0:81,0:81:99:0,214,3783	0/0:15,0:15:39.09:0,39,678	0/0:19,0:19:54.17:0,54,964	0/0:37,0:37:99:0,108,2004	1/1:5,21:26:48.16:1279,48,0	0/0:29,0:29:72.25:0,72,1317	0/0:17,0:17:42.10:0,42,733	0/0:7,0:7:21.06:0,21,355
chr10	16989390	.	GCTCAGTTGGCTTCCGGGCAA	G	1449.68	PASS	AC=2;AF=0.037;AN=54;BaseQRankSum=5.079;DP=691;FS=2.844;HRun=0;HaplotypeScore=384.8523;InbreedingCoeff=0.9985;MQ=73.96;MQ0=0;MQRankSum=-5.091;QD=90.60;ReadPosRankSum=1.239;VQSLOD=2.5046;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,126,11595	0/0:11,0:11:33.11:0,33,2578	0/0:27,0:27:81.28:0,81,4395	0/0:13,0:13:36.08:0,36,2226	0/0:13,0:13:39.13:0,39,2618	0/0:18,0:18:51.18:0,51,4131	0/0:35,0:35:99:0,105,9156	0/0:24,0:24:69.24:0,69,5036	0/0:24,0:24:72.25:0,72,5926	0/0:20,0:20:57.20:0,57,3745	0/0:18,0:18:54.19:0,54,4447	0/0:36,0:36:99:0,108,9807	0/0:36,0:36:99:0,108,9537	0/0:23,0:23:69.24:0,69,5946	0/0:32,0:32:93.32:0,93,7590	0/0:29,0:29:87.30:0,87,6741	0/0:29,0:28:84.29:0,84,6840	0/0:27,0:27:78.27:0,78,6178	0/0:20,0:19:54.19:0,54,3774	0/0:21,0:21:63.22:0,63,5159	0/0:47,0:47:99:0,141,10959	0/0:23,0:23:69.24:0,69,6429	0/0:26,0:26:78.27:0,78,6421	0/0:31,0:31:90.31:0,90,8138	1/1:6,10:16:27.09:1543,27,0	0/0:25,0:25:75.26:0,75,6158	0/0:25,0:25:75.26:0,75,6014	./.
chr10	16990019	.	TTG	T	161.71	PASS	AB=0.987;AC=9;AF=0.173;AN=52;BaseQRankSum=2.068;DP=582;FS=3.094;HRun=0;HaplotypeScore=97.4718;InbreedingCoeff=-0.0039;MQ=65.42;MQ0=26;MQRankSum=1.185;QD=1.02;ReadPosRankSum=0.759;VQSLOD=1.9161;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:23:3.89:0,4,28	0/1:10,0:10:14.27:14,0,18	./.	./.	0/0:17,0:16:5.99:0,6,65	0/0:19,0:18:8.23:0,8,72	0/0:26,0:24:4.23:0,4,47	0/0:41,0:40:2.97:0,3,20	0/0:19,0:19:3.73:0,4,17	0/1:29,0:28:14.42:14,0,80	0/1:9,0:9:5.01:5,0,6	0/0:15,0:15:7.27:0,7,71	0/0:21,0:20:9.88:0,10,51	0/0:16,0:16:1.08:0,1,3	0/1:25,0:24:7.41:7,0,29	1/1:11,2:13:14.97:142,15,0	0/1:27,0:25:3.34:3,0,9	0/1:18,2:18:3.96:79,0,4	0/0:17,0:16:2.53:0,3,23	0/0:16,0:15:4.76:0,5,37	0/0:34,0:29:3.95:0,4,33	0/0:12,0:11:3:0,3,25	0/0:15,0:13:6.38:0,6,39	0/1:24,0:22:19.08:19,0,60	0/0:15,1:16:6.01:0,6,61	0/0:25,0:24:9.23:0,9,40	0/0:12,0:12:5.69:0,6,48	0/0:6,0:4:3.89:0,4,30
chr10	16990085	.	CTG	C	116.21	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=1.463;DP=577;FS=0.000;HRun=0;HaplotypeScore=146.9372;InbreedingCoeff=0.6076;MQ=45.29;MQ0=55;MQRankSum=-1.027;QD=3.23;ReadPosRankSum=-1.038;VQSLOD=2.5154;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:35:30.91:0,31,978	0/0:12,0:12:16.31:0,16,135	0/0:19,1:5:12.79:0,13,150	0/0:19,0:7:0.24:0,0,55	0/0:24,0:20:20.97:0,21,199	0/0:20,0:19:36.12:0,36,602	0/0:31,0:29:48.63:0,49,779	0/0:18,0:13:30.05:0,30,434	0/0:24,0:23:27.28:0,27,596	0/0:19,0:14:29.56:0,30,277	0/0:9,0:9:6.02:0,6,66	0/0:18,0:18:24.87:0,25,461	0/0:17,0:15:30.01:0,30,334	0/0:24,1:24:24.33:0,24,397	0/0:24,0:19:14.99:0,15,140	1/1:7,11:17:2.22:33,2,0	0/0:19,0:17:23.57:0,24,223	1/1:18,0:12:14.23:186,14,0	0/0:13,0:11:26.84:0,27,327	0/0:19,0:18:9.79:0,10,256	0/0:32,0:23:12.93:0,13,182	0/0:14,0:9:18.03:0,18,270	0/0:12,0:11:29.99:0,30,449	0/0:43,0:41:89.76:0,90,1373	0/0:20,0:18:14.92:0,15,237	0/0:31,0:28:68.60:0,69,728	0/0:9,0:9:17.72:0,18,183	0/0:7,0:4:3.01:0,3,31
chr10	16990114	.	CGAGAGAGAGA	C	5400.54	PASS	AB=1.000;AC=28;AF=0.500;AN=56;BaseQRankSum=9.213;DP=635;FS=8.724;HRun=0;HaplotypeScore=216.3803;InbreedingCoeff=0.8032;MQ=56.49;MQ0=15;MQRankSum=-9.647;QD=16.07;ReadPosRankSum=-0.051;VQSLOD=2.8543;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:43:99:0,111,3459	1/1:9,4:13:12.04:221,12,0	0/1:57,0:12:3.76:4,0,64	0/1:63,0:19:12.99:13,0,176	1/1:14,1:13:7.99:50,8,0	0/0:17,0:18:45.11:0,45,1403	0/0:28,0:32:67.09:0,67,1838	1/1:24,0:23:60.08:735,60,0	0/0:26,0:26:65.80:0,66,2627	1/1:10,4:14:26.61:570,27,0	1/1:6,5:11:3.01:66,3,0	0/0:16,0:16:42.14:0,42,1673	0/0:10,0:11:27.09:0,27,1225	0/0:17,0:18:38.39:0,38,1247	1/1:10,12:21:9.84:149,10,0	0/0:22,0:21:24.04:0,24,1037	1/1:17,6:23:32.07:527,32,0	0/0:14,0:12:36.04:0,36,1406	1/1:9,7:16:39.07:823,39,0	1/1:14,3:17:20.94:183,21,0	1/1:17,3:19:9:99,9,0	0/0:13,0:12:35.48:0,35,1220	0/0:14,0:14:24.08:0,24,721	0/0:46,0:47:99:0,117,4077	0/0:22,0:22:27.09:0,27,905	1/1:21,6:27:66.10:1209,66,0	1/1:4,9:13:33.09:727,33,0	1/1:1,0:1:3:25,3,0
chr10	16990123	.	G	GAC	2046.11	PASS	AB=0.975;AC=27;AF=0.482;AN=56;BaseQRankSum=10.428;DP=612;FS=4.431;HRun=0;HaplotypeScore=156.3180;InbreedingCoeff=0.7297;MQ=56.55;MQ0=16;MQRankSum=-9.575;QD=7.63;ReadPosRankSum=-0.383;VQSLOD=3.3955;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,120,1467	1/1:13,0:13:11.63:79,12,0	0/1:49,0:10:17.31:17,0,60	0/0:56,0:16:14.42:0,14,188	1/1:10,1:10:7.96:48,8,0	0/0:18,0:18:51.06:0,51,645	0/0:35,0:35:71.45:0,71,898	1/1:22,0:20:59.62:508,60,0	0/0:26,0:26:69.15:0,69,962	1/1:9,1:10:25.25:174,25,0	1/1:9,1:10:2.85:49,3,0	0/0:16,0:16:45.13:0,45,647	0/0:12,0:12:30.04:0,30,391	0/0:19,0:19:48.06:0,48,583	1/1:20,0:20:8.56:87,9,0	0/0:23,0:22:30.06:0,30,373	0/1:23,2:24:1.47:153,0,1	0/0:16,0:15:43.69:0,44,498	1/1:13,1:13:32.30:237,32,0	1/1:16,0:16:20.73:145,21,0	1/1:16,0:16:9:99,9,0	0/0:15,0:15:45.06:0,45,588	0/0:13,0:13:27.07:0,27,389	0/0:47,0:45:99:0,116,1555	0/1:23,0:22:15.10:15,0,136	1/1:24,1:25:60.92:492,61,0	1/1:13,0:13:11.16:127,11,0	1/1:1,0:1:3:25,3,0
chr10	16990131	.	GAGAC	G	2866.13	PASS	AB=1.000;AC=30;AF=0.536;AN=56;BaseQRankSum=12.413;DP=618;FS=4.933;HRun=0;HaplotypeScore=170.9789;InbreedingCoeff=0.6414;MQ=57.17;MQ0=16;MQRankSum=-10.795;QD=8.50;ReadPosRankSum=-3.567;VQSLOD=1.8749;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:59.47:0,59,1740	1/1:5,8:13:14.91:165,15,0	0/0:36,0:8:4.31:0,4,53	0/1:45,0:14:0.70:1,0,79	1/1:11,1:11:2.65:18,3,0	0/0:18,0:18:48.07:0,48,828	0/0:32,0:32:60.99:0,61,990	1/1:20,3:20:55.90:497,56,0	0/0:26,0:26:60.22:0,60,1458	1/1:18,1:19:38.77:381,39,0	1/1:10,0:10:5.98:56,6,0	0/0:20,0:20:56.23:0,56,922	0/0:14,0:14:38.98:0,39,720	0/0:17,0:17:41.92:0,42,707	1/1:25,1:26:8.72:78,9,0	0/1:23,0:22:37.57:38,0,211	1/1:27,3:28:32.18:274,32,0	0/1:18,0:16:10.85:11,0,323	1/1:13,0:12:29.64:289,30,0	1/1:8,8:16:14.59:117,15,0	1/1:17,2:19:6.21:37,6,0	0/0:17,0:17:33.67:0,34,783	0/0:12,0:12:16.07:0,16,395	0/0:44,0:42:99:0,105,2024	0/1:9,0:26:26.72:27,0,134	1/1:22,6:28:73.85:725,74,0	1/1:11,3:14:29.84:339,30,0	1/1:1,0:1:2.97:20,3,0
chr10	16990135	.	CAG	C	1650.05	PASS	AB=0.830;AC=25;AF=0.446;AN=56;BaseQRankSum=9.673;DP=606;FS=21.745;HRun=0;HaplotypeScore=153.6346;InbreedingCoeff=0.6338;MQ=56.73;MQ0=15;MQRankSum=-7.577;QD=7.08;ReadPosRankSum=-2.049;VQSLOD=1.5513;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:53.41:0,53,1162	1/1:8,5:13:8.05:58,8,0	0/0:32,0:6:3.01:0,3,36	0/0:45,0:13:2.69:0,3,8	0/1:5,5:9:0:1,0,0	0/0:16,1:17:38.89:0,39,528	0/0:32,1:33:53.89:0,54,692	1/1:17,4:18:10.29:151,10,0	0/0:25,0:25:59.92:0,60,888	1/1:5,14:19:18.49:367,18,0	1/1:4,6:10:4.25:33,4,0	0/0:20,1:21:17.64:0,18,696	0/0:18,0:18:53.88:0,54,744	0/0:16,0:16:0.16:0,0,481	1/1:9,18:28:5.55:26,6,0	0/0:23,0:22:2.40:0,2,237	1/1:13,15:26:19.80:188,20,0	0/1:17,0:16:19.80:20,0,325	1/1:3,8:10:24.88:284,25,0	0/1:11,3:14:3.24:73,0,3	1/1:10,9:19:3.01:37,3,0	0/0:17,0:17:36.01:0,36,526	0/0:13,0:13:17.41:0,17,221	0/0:41,1:40:47.46:0,47,1122	0/0:26,0:25:9.28:0,9,181	1/1:15,13:28:31.61:415,32,0	1/1:3,11:14:19.58:181,20,0	1/1:1,0:1:1.55:4,2,0
chr10	16991072	.	TACACACACACACACACAC	T	8619.90	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=9.992;DP=581;FS=5.565;HRun=0;HaplotypeScore=276.4141;InbreedingCoeff=0.9279;MQ=65.96;MQ0=13;MQRankSum=-7.448;QD=44.90;ReadPosRankSum=0.755;VQSLOD=3.2435;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:23:30.10:0,30,1634	1/1:9,3:12:9.03:387,9,0	0/0:35,0:21:9.03:0,9,271	0/0:25,0:16:9.03:0,9,282	1/1:12,6:18:12:308,12,0	0/0:20,0:23:45.15:0,45,3193	0/0:28,0:28:66.20:0,66,3453	0/0:20,0:19:18.06:0,18,581	0/0:27,0:27:60.21:0,60,3834	1/1:22,15:37:47.73:1496,48,0	1/1:9,8:19:24.04:937,24,0	0/0:16,0:17:39.13:0,39,2556	0/0:13,0:16:36.11:0,36,2395	0/0:16,0:18:36.12:0,36,2514	1/1:14,8:23:20.69:972,21,0	0/0:7,0:18:27.08:0,27,404	1/1:11,3:13:12.01:435,12,0	0/0:10,0:14:24.08:0,24,620	0/0:10,0:10:9.03:0,9,276	0/0:5,0:10:27.08:0,27,637	0/0:25,0:28:12.04:0,12,335	0/0:17,0:18:33.10:0,33,2166	0/0:13,0:16:33.11:0,33,2486	0/0:23,0:24:50.57:0,51,2773	0/0:8,0:14:27.07:0,27,1495	1/1:16,15:33:51.12:2075,51,0	1/1:17,13:31:42.14:1788,42,0	1/1:2,1:4:5.55:221,6,0
chr10	16991137	.	CT	C	81.72	PASS	AB=0.905;AC=4;AF=0.071;AN=56;BaseQRankSum=-0.655;DP=594;FS=2.604;HRun=14;HaplotypeScore=121.9971;InbreedingCoeff=0.3110;MQ=53.33;MQ0=4;MQRankSum=0.952;QD=1.17;ReadPosRankSum=1.608;VQSLOD=0.1326;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:25,1:24:8.08:8,0,230	0/0:6,0:8:9.70:0,10,54	0/0:20,0:14:15.99:0,16,104	0/0:18,0:8:0:0,0,0	0/0:12,0:15:30.03:0,30,152	0/0:18,0:18:29.97:0,30,267	0/0:18,1:20:6.29:0,6,246	0/0:14,0:19:27.12:0,27,189	0/0:23,0:24:29.46:0,29,276	0/0:27,0:33:44.60:0,45,266	0/0:20,0:22:34.65:0,35,209	0/0:24,1:25:5.54:0,6,159	0/0:13,0:13:20.70:0,21,215	0/1:18,4:22:3.88:4,0,240	0/0:26,0:30:36.82:0,37,203	0/0:25,0:25:51.18:0,51,405	0/0:10,0:20:18.51:0,19,96	0/0:14,1:15:17.66:0,18,190	0/0:12,0:17:23.65:0,24,135	0/0:15,0:17:33.95:0,34,211	0/0:7,0:18:13.64:0,14,72	0/0:27,1:30:42.58:0,43,504	0/0:19,1:19:6.38:0,6,188	0/0:14,2:16:3.28:0,3,140	1/1:9,13:22:4.77:159,5,0	0/0:40,0:43:83.37:0,83,516	0/0:27,0:29:54.40:0,54,341	0/0:3,0:5:5.24:0,5,24
chr10	16992231	.	T	TC	2470.88	PASS	AB=0.974;AC=31;AF=0.554;AN=56;BaseQRankSum=11.112;DP=544;FS=3.921;HRun=7;HaplotypeScore=77.8308;InbreedingCoeff=0.8879;MQ=70.39;MQ0=33;MQRankSum=-2.758;QD=8.61;ReadPosRankSum=-0.934;VQSLOD=1.0733;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:25:48.07:0,48,463	1/1:6,0:6:9.26:53,9,0	0/0:38,0:26:63.01:0,63,585	0/0:35,0:25:63.67:0,64,550	1/1:19,1:19:41.91:260,42,0	0/0:17,0:15:39.01:0,39,366	0/0:19,0:18:45.01:0,45,429	1/1:20,1:19:23.32:142,23,0	0/0:18,0:15:35.35:0,35,346	1/1:22,0:20:43.04:236,43,0	1/1:16,1:15:20.52:121,21,0	0/0:18,0:17:39.04:0,39,370	0/0:9,0:8:18.03:0,18,174	0/0:15,0:13:36.06:0,36,346	1/1:19,1:19:34.62:228,35,0	1/1:3,13:16:12.04:145,12,0	1/1:24,2:22:31.82:252,32,0	1/1:0,10:10:15.05:181,15,0	1/1:14,0:13:29.02:178,29,0	1/1:16,0:16:20.47:118,20,0	0/1:37,1:32:15.04:243,0,15	0/0:20,0:20:41.98:0,42,455	0/0:8,0:8:12.01:0,12,115	0/0:33,0:32:63.05:0,63,607	1/1:15,0:15:7.26:141,7,0	1/1:21,0:19:9.81:155,10,0	1/1:14,0:13:23.60:155,24,0	1/1:10,1:9:14.65:87,15,0
chr10	16992238	.	CT	C	4712.68	PASS	AB=0.690;AC=25;AF=0.446;AN=56;BaseQRankSum=6.673;DP=555;FS=0.798;HRun=1;HaplotypeScore=67.8843;InbreedingCoeff=0.5823;MQ=64.54;MQ0=36;MQRankSum=-0.771;QD=16.77;ReadPosRankSum=-1.245;VQSLOD=4.5703;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:48.37:0,48,736	1/1:1,5:6:9.50:127,10,0	0/0:34,0:22:63.11:0,63,807	0/0:32,0:22:63.01:0,63,806	1/1:5,18:22:22.01:555,22,0	0/0:16,0:14:41.93:0,42,569	0/0:20,0:19:37.89:0,38,632	1/1:3,16:16:28.51:307,29,0	0/0:22,0:19:15.03:0,15,492	0/1:5,20:23:13.01:567,0,13	0/1:4,13:16:11.05:266,0,11	0/0:15,0:14:39.11:0,39,543	0/0:13,0:12:16.24:0,16,310	0/0:18,0:15:38.53:0,39,496	0/1:7,11:20:10.49:249,0,10	0/1:16,0:16:5.04:5,0,65	1/1:12,14:22:17.98:334,18,0	0/0:12,0:12:6.02:0,6,76	1/1:0,13:12:35.02:413,35,0	1/1:1,12:13:21.07:293,21,0	1/1:15,20:30:4.73:600,5,0	0/0:25,0:25:28.12:0,28,686	0/0:7,0:7:15.03:0,15,184	0/0:30,0:29:49.10:0,49,863	1/1:13,0:15:8.11:30,8,0	0/1:11,12:21:20.81:479,0,21	1/1:3,11:14:15.89:321,16,0	1/1:3,8:9:2.35:168,2,0
chr10	16993046	.	ACAAG	A	7933.81	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=13.794;DP=681;FS=2.607;HRun=0;HaplotypeScore=115.3605;InbreedingCoeff=0.9821;MQ=66.81;MQ0=3;MQRankSum=1.981;QD=22.73;ReadPosRankSum=2.984;VQSLOD=4.9212;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:66.86:0,67,1210	1/1:4,7:11:11.99:166,12,0	0/0:31,0:23:18.06:0,18,336	0/0:42,0:37:65.98:0,66,982	1/1:8,17:25:50.74:610,51,0	0/0:23,0:23:57.17:0,57,1210	0/0:22,0:22:50.11:0,50,793	1/1:25,0:25:21.04:255,21,0	0/0:23,0:23:60.15:0,60,1244	1/1:7,18:25:57.12:790,57,0	1/1:3,19:22:50.67:597,51,0	0/0:25,0:24:48.07:0,48,968	0/0:16,0:16:36.08:0,36,696	0/0:21,0:21:45.10:0,45,856	1/1:6,24:30:42.14:688,42,0	1/1:8,13:21:18.06:295,18,0	1/1:9,12:21:18.06:295,18,0	1/1:5,17:22:10.09:393,10,0	1/1:6,6:12:15.02:197,15,0	1/1:4,21:25:63.04:916,63,0	1/1:14,23:37:45.15:736,45,0	0/0:19,0:19:42.12:0,42,846	0/0:18,0:18:35.90:0,36,712	0/0:36,0:36:87.13:0,87,1774	0/0:23,0:23:39.12:0,39,893	1/1:8,24:32:72.12:964,72,0	1/1:10,21:31:45.15:737,45,0	1/1:2,8:10:18.06:295,18,0
chr10	16994119	.	TGGTACTGCAGCACAGCACTGTAACCAA	T	6920.73	PASS	AB=0.783;AC=23;AF=0.411;AN=56;BaseQRankSum=10.202;DP=824;FS=13.156;HRun=0;HaplotypeScore=536.1979;InbreedingCoeff=0.7890;MQ=70.31;MQ0=0;MQRankSum=-5.569;QD=20.42;ReadPosRankSum=2.178;VQSLOD=0.9587;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:72,0:72:99:0,160,15602	1/1:7,5:12:6.02:418,6,0	0/0:23,0:22:18.06:0,18,731	0/0:21,0:21:24.08:0,24,1032	0/1:20,12:32:1.07:11,0,1	0/0:25,0:25:60.21:0,60,6315	0/0:45,0:45:72.25:0,72,5788	1/1:22,0:21:9:106,9,0	0/0:27,0:27:47.73:0,48,3899	1/1:20,13:33:17.94:556,18,0	0/1:7,11:18:0.52:203,0,1	0/0:46,0:46:99:0,108,11516	0/0:31,0:31:72.25:0,72,6964	0/0:47,0:47:90.31:0,90,10101	1/1:30,19:49:24.08:1621,24,0	0/0:25,0:25:60.21:0,60,6212	1/1:18,15:33:12.04:818,12,0	0/0:31,0:31:54.19:0,54,5679	1/1:16,0:16:5.99:50,6,0	1/1:8,14:22:4.26:274,4,0	0/1:39,0:39:5.56:73,0,6	0/0:23,0:23:39.13:0,39,3454	0/0:18,0:18:30.10:0,30,3285	0/0:30,0:30:54.19:0,54,5644	0/0:21,0:20:36.10:0,36,2859	1/1:20,13:33:26.56:998,27,0	1/1:11,12:23:18.06:1166,18,0	1/1:1,6:7:9.03:627,9,0
chr10	16994148	.	GTA	G	516.76	PASS	AB=0.962;AC=13;AF=0.232;AN=56;BaseQRankSum=9.732;DP=647;FS=5.945;HRun=0;HaplotypeScore=124.3940;InbreedingCoeff=-0.1156;MQ=64.30;MQ0=0;MQRankSum=-6.377;QD=3.27;ReadPosRankSum=3.967;VQSLOD=2.0622;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:69,0:69:99:0,202,4083	0/1:6,0:6:18.37:18,0,39	0/0:22,0:20:60.21:0,60,1201	0/0:23,0:23:69.24:0,69,1345	0/0:12,0:12:9.03:0,9,181	0/0:25,0:25:75.26:0,75,1524	0/0:38,0:38:99:0,114,2299	0/1:7,3:10:35.12:35,0,386	0/0:33,0:33:96.32:0,96,1890	0/1:15,0:15:29.09:29,0,291	0/1:13,0:13:27.18:27,0,54	0/0:48,0:48:99:0,144,2924	0/0:33,0:33:99:0,99,1989	0/0:38,0:38:99:0,114,2303	0/1:20,0:20:48.37:152,0,48	0/0:31,0:31:93.32:0,93,1889	1/1:16,0:16:11.70:107,12,0	0/0:31,0:31:93.32:0,93,1865	0/1:7,2:8:22.87:23,0,398	0/1:14,0:14:30.53:31,0,107	0/1:21,0:21:44.84:45,0,280	0/0:21,0:21:63.22:0,63,1268	0/0:17,0:17:51.18:0,51,1025	0/0:27,0:27:81.28:0,81,1646	0/0:21,0:21:63.19:0,63,1240	0/1:14,0:14:60.86:61,0,208	0/1:13,0:12:40.69:112,0,41	0/1:7,0:7:34.84:35,0,48
chr10	16994637	.	AAG	A	4700.15	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=9.887;DP=360;FS=4.488;HRun=0;HaplotypeScore=50.0682;InbreedingCoeff=0.9724;MQ=77.62;MQ0=0;MQRankSum=1.099;QD=37.01;ReadPosRankSum=3.755;VQSLOD=6.9687;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:63.18:0,63,1056	1/1:0,4:4:12.04:170,12,0	0/0:8,0:8:23.98:0,24,243	0/0:8,0:8:20.93:0,21,194	1/1:1,11:12:35.33:474,35,0	0/0:20,0:20:60.19:0,60,1033	0/0:8,0:8:24.08:0,24,424	0/0:27,0:27:79.10:0,79,1318	0/0:9,0:9:26.93:0,27,381	1/1:1,11:12:33.09:435,33,0	1/1:2,12:14:39.13:550,39,0	0/0:6,0:6:18.06:0,18,318	0/0:11,0:11:30.06:0,30,445	0/0:11,0:11:30.10:0,30,530	1/1:1,5:6:15.05:212,15,0	0/0:9,0:9:24.08:0,24,425	1/1:3,31:34:87.29:1232,87,0	0/0:25,0:25:66.23:0,66,1154	0/0:18,0:18:54.18:0,54,915	0/0:15,0:15:42.06:0,42,676	0/0:7,0:7:21.05:0,21,342	0/0:4,0:4:12.03:0,12,174	0/0:3,0:3:9.03:0,9,159	0/0:5,0:5:15.04:0,15,237	0/0:18,0:18:51.17:0,51,886	1/1:0,17:17:48.11:625,48,0	1/1:0,18:18:42.14:595,42,0	1/1:1,9:10:30.09:408,30,0
chr10	16994722	.	A	AT	4643.82	PASS	AB=0.784;AC=32;AF=0.571;AN=56;BaseQRankSum=2.811;DP=447;FS=13.311;HRun=11;HaplotypeScore=60.3977;InbreedingCoeff=0.6534;MQ=64.79;MQ0=3;MQRankSum=-0.775;QD=16.29;ReadPosRankSum=-1.247;VQSLOD=4.0546;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,1:34:62.02:0,62,653	0/1:4,3:8:8.27:94,0,8	0/1:9,0:6:11.50:12,0,41	0/0:10,0:10:4.99:0,5,41	1/1:6,16:22:31.66:477,32,0	0/0:20,0:20:43.85:0,44,328	0/0:19,1:20:20.36:0,20,341	1/1:13,12:26:18.49:332,18,0	0/0:19,0:19:35.81:0,36,274	1/1:7,5:12:27.93:271,28,0	1/1:3,9:12:29.98:288,30,0	0/0:9,0:9:23.89:0,24,186	0/0:9,0:8:15.88:0,16,150	0/1:9,0:11:9.77:10,0,116	1/1:2,11:13:3.82:220,4,0	1/1:3,6:11:21.76:198,22,0	1/1:5,24:29:28.66:643,29,0	1/1:5,18:24:41.75:394,42,0	1/1:7,4:11:15.03:151,15,0	0/1:6,9:15:16.44:200,0,16	1/1:3,8:12:23.70:213,24,0	0/0:12,0:12:23.87:0,24,184	0/0:8,0:8:20.91:0,21,163	0/0:20,0:20:56.77:0,57,441	1/1:5,1:18:28.97:178,29,0	1/1:6,15:21:54.07:534,54,0	1/1:6,14:20:5.06:383,5,0	1/1:9,1:10:5.85:45,6,0
chr10	16995095	.	GA	G	6806.55	PASS	AB=0.529;AC=27;AF=0.482;AN=56;BaseQRankSum=11.661;DP=649;FS=2.609;HRun=10;HaplotypeScore=69.3495;InbreedingCoeff=0.9388;MQ=69.04;MQ0=1;MQRankSum=0.100;QD=21.20;ReadPosRankSum=0.723;VQSLOD=5.8729;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,1:25:45.89:0,46,683	0/1:1,8:9:6.19:181,0,6	0/0:22,0:18:26.02:0,26,268	0/0:16,1:13:14.20:0,14,158	1/1:4,31:36:95.89:819,96,0	0/0:19,0:19:51.14:0,51,564	0/0:27,0:28:84.06:0,84,910	1/1:3,24:27:71.93:618,72,0	0/0:16,0:18:47.79:0,48,491	1/1:2,22:24:65.40:542,65,0	1/1:3,17:20:35.95:312,36,0	0/0:23,0:25:66.01:0,66,711	0/0:28,0:28:69.18:0,69,754	0/0:28,0:28:75.18:0,75,811	1/1:2,24:26:65.98:573,66,0	0/0:29,0:29:69.17:0,69,754	1/1:1,19:21:53.02:449,53,0	0/0:18,1:19:24.92:0,25,473	1/1:0,13:13:38.99:338,39,0	1/1:3,21:23:62.93:540,63,0	1/1:1,28:30:68.98:599,69,0	0/0:22,0:22:60.13:0,60,641	0/0:28,1:31:57.98:0,58,828	0/0:16,0:16:45.12:0,45,498	1/1:9,16:25:53.93:463,54,0	1/1:0,24:24:71.38:592,71,0	1/1:2,29:31:68.92:599,69,0	1/1:2,9:11:20.99:182,21,0
chr10	16995739	.	T	TGCA	22041.13	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-17.069;DP=754;FS=1.210;HRun=0;HaplotypeScore=97.6470;InbreedingCoeff=0.9761;MQ=76.03;MQ0=0;MQRankSum=-4.968;QD=56.23;ReadPosRankSum=1.341;VQSLOD=7.0660;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,106,1694	1/1:0,11:11:33.11:744,33,0	0/0:24,0:24:63.13:0,63,926	0/0:17,0:17:45.13:0,45,684	1/1:1,26:27:66.23:1490,66,0	0/0:28,0:28:78.27:0,78,1299	0/0:14,0:14:39.12:0,39,624	1/1:8,36:45:99:2866,132,0	0/0:31,0:31:90.29:0,90,1468	1/1:2,28:30:90.31:2020,90,0	1/1:5,21:25:54.19:1222,54,0	0/0:34,0:34:99:0,99,1617	0/0:30,0:30:84.27:0,84,1370	0/0:18,0:18:42.14:0,42,694	1/1:5,37:43:99:2243,99,0	0/0:32,0:32:96.30:0,96,1549	1/1:0,28:28:81.28:1835,81,0	0/0:24,0:24:69.21:0,69,1122	1/1:8,14:25:66.05:1252,66,0	1/1:1,23:24:63.22:1427,63,0	1/1:1,32:33:75.26:1700,75,0	0/0:24,0:24:69.22:0,69,1119	0/0:19,0:19:54.18:0,54,899	0/0:28,0:28:81.28:0,81,1345	1/1:3,18:21:45.15:1017,45,0	1/1:5,30:35:90.31:2003,90,0	1/1:6,34:43:96.33:2154,96,0	1/1:0,1:1:3.01:68,3,0
chr10	16998115	.	GT	G	770.91	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.100;DP=616;FS=11.328;HRun=1;HaplotypeScore=57.8812;InbreedingCoeff=0.9925;MQ=66.43;MQ0=23;MQRankSum=0.936;QD=24.87;ReadPosRankSum=-0.563;VQSLOD=2.1233;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:87.15:0,87,1145	0/0:10,0:10:30.09:0,30,400	0/0:21,0:11:25.99:0,26,339	0/0:20,0:12:20.25:0,20,270	0/0:32,0:32:95.93:0,96,1166	0/0:19,0:19:57.16:0,57,760	0/0:25,0:25:68.87:0,69,894	0/0:33,0:33:93.22:0,93,1184	0/0:8,0:8:24.08:0,24,334	0/0:21,0:21:60.15:0,60,798	0/0:18,0:18:42.96:0,43,572	0/0:17,0:17:51.15:0,51,692	0/0:24,0:24:72.23:0,72,985	0/0:19,0:19:57.19:0,57,792	0/0:26,0:24:72.17:0,72,946	1/1:1,14:15:35.99:456,36,0	0/0:12,0:10:26.65:0,27,358	1/1:1,15:16:33.07:437,33,0	0/0:13,0:11:33.03:0,33,404	0/0:29,0:29:86.98:0,87,1032	0/0:41,0:40:99:0,114,1489	0/0:29,0:29:78.53:0,79,1009	0/0:28,0:28:84.22:0,84,1087	0/0:28,0:27:84.21:0,84,1111	0/0:24,0:24:72.17:0,72,946	0/0:18,0:17:51.17:0,51,711	0/0:33,0:32:86.72:0,87,1242	0/0:8,0:7:21.07:0,21,293
chr10	16998761	.	CG	C	1223.49	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.471;DP=584;FS=1.391;HRun=1;HaplotypeScore=61.1365;InbreedingCoeff=0.9996;MQ=68.99;MQ0=0;MQRankSum=-0.104;QD=32.20;ReadPosRankSum=3.308;VQSLOD=3.4127;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:54.18:0,54,849	0/0:11,0:11:33.11:0,33,522	0/0:17,0:17:48.16:0,48,766	0/0:12,0:12:35.86:0,36,539	0/0:29,0:28:87.21:0,87,1332	0/0:29,0:29:87.30:0,87,1390	0/0:17,0:17:48.15:0,48,744	0/0:35,0:35:99:0,105,1653	0/0:20,0:20:60.20:0,60,958	0/0:24,0:24:72.25:0,72,1149	0/0:26,0:26:78.27:0,78,1235	0/0:21,0:21:63.21:0,63,1005	0/0:14,0:14:42.12:0,42,642	0/0:15,0:15:42.14:0,42,668	0/0:22,0:22:66.21:0,66,1031	1/1:0,25:24:66.18:839,66,0	0/0:18,0:18:54.18:0,54,857	1/1:0,13:13:39.13:506,39,0	0/0:18,0:18:54.15:0,54,816	0/0:30,0:30:90.31:0,90,1438	0/0:29,0:29:84.26:0,84,1294	0/0:12,0:12:36.12:0,36,574	0/0:22,0:22:63.21:0,63,1006	0/0:19,0:19:57.18:0,57,882	0/0:17,0:17:51.17:0,51,815	0/0:13,0:13:39.13:0,39,623	0/0:41,0:41:99:0,123,1954	0/0:16,0:16:48.16:0,48,767
chr10	16999046	.	CA	C	1627.81	PASS	AB=0.848;AC=21;AF=0.375;AN=56;BaseQRankSum=2.501;DP=425;FS=4.210;HRun=13;HaplotypeScore=50.0779;InbreedingCoeff=0.6731;MQ=55.14;MQ0=8;MQRankSum=1.081;QD=8.70;ReadPosRankSum=1.475;VQSLOD=2.4457;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,1:31:47.22:0,47,620	1/1:1,8:9:14.77:109,15,0	0/0:6,0:3:4.25:0,4,32	0/0:4,0:1:3:0,3,25	1/1:6,14:24:34.83:215,35,0	0/0:15,0:14:28.18:0,28,316	0/0:12,0:8:17.85:0,18,155	0/0:27,1:24:20.12:0,20,349	0/0:11,1:13:4.21:0,4,218	1/1:9,12:22:7.66:201,8,0	1/1:5,13:19:31.79:225,32,0	0/0:12,0:12:36.06:0,36,350	0/0:8,0:8:12.02:0,12,116	0/0:12,0:12:17.98:0,18,165	1/1:4,7:10:17.88:131,18,0	0/0:4,0:9:20.38:0,20,125	1/1:6,8:16:21:127,21,0	0/0:3,0:2:5.90:0,6,37	0/0:8,0:14:29.37:0,29,204	0/0:6,0:22:46.12:0,46,261	0/1:1,1:6:13.22:13,0,20	0/1:7,3:10:43.38:43,0,96	0/0:22,0:23:47.89:0,48,442	0/1:10,1:11:0.88:1,0,154	0/0:7,0:22:54.63:0,55,330	1/1:4,8:14:1.73:158,2,0	1/1:7,20:28:55.68:399,56,0	1/1:5,9:11:28.87:203,29,0
chr10	17000724	.	A	AGCAAGGAG	24115.31	PASS	AB=0.545;AC=29;AF=0.537;AN=54;BaseQRankSum=-11.908;DP=564;FS=17.617;HRun=0;HaplotypeScore=129.4015;InbreedingCoeff=0.9217;MQ=62.96;MQ0=0;MQRankSum=-15.829;QD=81.47;ReadPosRankSum=0.219;VQSLOD=3.8562;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,99,2589	1/1:2,1:5:6.02:171,6,0	0/0:16,0:16:45.15:0,45,1220	0/0:28,0:28:69.18:0,69,1502	1/1:2,11:19:30.05:1071,30,0	0/0:18,0:18:45.15:0,45,1180	0/0:22,0:22:63.19:0,63,1575	1/1:11,16:35:84.25:3304,84,0	0/0:18,0:18:54.19:0,54,1507	1/1:3,5:16:48.14:1540,48,0	1/1:1,9:15:23.95:830,24,0	0/0:30,0:30:90.30:0,90,2411	0/0:19,0:19:51.16:0,51,1336	0/0:20,0:20:56.98:0,57,1473	1/1:0,20:25:54.19:2384,54,0	0/1:5,22:30:6.62:3232,0,7	1/1:6,7:17:33.11:1417,33,0	1/1:2,11:16:36.12:1508,36,0	1/1:8,13:23:60.15:2225,60,0	1/1:5,4:15:17.67:561,18,0	1/1:5,14:22:33.11:1190,33,0	0/0:25,0:25:72.19:0,72,1875	0/0:21,0:21:57.14:0,57,1501	0/0:17,0:17:48.16:0,48,1296	1/1:1,8:11:21.07:928,21,0	1/1:1,11:13:39.12:1478,39,0	1/1:6,19:29:54.19:2274,54,0	./.
chr10	17001493	.	C	CT	1379.99	PASS	AB=0.871;AC=14;AF=0.250;AN=56;BaseQRankSum=-5.615;DP=639;FS=0.000;HRun=13;HaplotypeScore=86.9259;InbreedingCoeff=0.5528;MQ=66.74;MQ0=0;MQRankSum=-0.349;QD=6.67;ReadPosRankSum=-1.147;VQSLOD=2.3952;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,2:30:30.49:0,30,337	0/1:12,1:13:1.11:1,0,133	0/0:34,0:24:1.43:0,1,98	0/1:17,0:15:36.98:53,0,37	0/0:25,0:29:45.61:0,46,298	0/0:14,0:16:27.81:0,28,176	0/0:10,0:12:27.82:0,28,172	1/1:12,16:28:34.28:349,34,0	0/0:23,0:23:47.56:0,48,326	0/0:32,0:35:78.56:0,79,515	0/0:15,0:16:34.72:0,35,230	0/0:12,0:12:29.63:0,30,200	0/0:13,0:13:14.85:0,15,103	0/0:15,1:17:13.62:0,14,229	0/0:23,1:24:30.19:0,30,331	1/1:4,23:27:27.47:397,27,0	0/0:30,0:32:52.18:0,52,397	1/1:9,13:22:21.25:243,21,0	1/1:5,8:13:14.23:175,14,0	0/1:15,17:31:23.51:254,0,24	1/1:6,9:15:1.39:73,1,0	0/0:25,1:28:21.31:0,21,266	0/0:18,0:20:37.42:0,37,245	0/0:20,2:23:5.94:0,6,165	0/0:3,0:25:27.38:0,27,88	0/0:26,0:26:56.37:0,56,383	0/1:32,4:36:4.81:5,0,368	0/0:14,1:15:7.86:0,8,197
chr10	17001847	.	AGAAATTTT	A	3708.35	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=12.237;DP=669;FS=4.179;HRun=0;HaplotypeScore=184.5143;InbreedingCoeff=0.9930;MQ=71.07;MQ0=0;MQRankSum=-11.847;QD=55.35;ReadPosRankSum=1.356;VQSLOD=3.0901;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,123,5386	0/0:8,0:8:24.08:0,24,1097	0/0:25,0:24:69.24:0,69,2850	0/0:21,0:22:66.22:0,66,2617	0/0:35,0:35:99:0,105,4662	0/0:38,0:38:99:0,111,4908	0/0:32,0:32:96.33:0,96,4294	1/1:0,9:8:24.08:571,24,0	0/0:29,0:29:87.30:0,87,3918	0/0:28,0:28:81.26:0,81,3629	0/0:17,0:17:51.16:0,51,2083	0/0:30,0:30:90.31:0,90,4103	0/0:23,0:23:69.24:0,69,2999	0/0:31,0:31:93.32:0,93,4172	0/0:35,0:35:99:0,105,4619	1/1:0,17:17:48.16:1079,48,0	0/0:29,0:29:87.30:0,87,4003	1/1:1,5:6:15.94:349,16,0	1/1:0,11:11:30.10:694,30,0	1/1:0,15:15:30.10:678,30,0	1/1:1,8:9:14.99:338,15,0	0/0:24,0:24:72.25:0,72,3236	0/0:24,0:24:69.24:0,69,3180	0/0:32,0:32:96.31:0,96,4197	0/0:16,0:16:48.16:0,48,2223	0/0:40,0:40:99:0,120,5487	0/0:27,0:27:78.27:0,78,3532	0/0:15,0:15:45.15:0,45,2084
chr10	17001856	.	CGTAAG	C	2346.18	PASS	AB=0.543;AC=10;AF=0.179;AN=56;BaseQRankSum=12.346;DP=675;FS=3.241;HRun=0;HaplotypeScore=149.2704;InbreedingCoeff=0.7346;MQ=72.95;MQ0=0;MQRankSum=-11.770;QD=33.04;ReadPosRankSum=1.304;VQSLOD=3.8118;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,123,4060	0/0:7,0:7:21.07:0,21,672	0/0:27,0:27:75.24:0,75,2115	0/0:18,0:18:54.14:0,54,1653	0/0:35,0:35:99:0,105,3431	0/0:34,0:34:99:0,102,3290	0/0:32,0:32:96.33:0,96,2883	1/1:0,9:8:24.08:403,24,0	0/0:28,0:28:84.29:0,84,2755	0/0:30,0:30:90.31:0,90,2942	0/0:15,0:15:45.11:0,45,1418	0/0:29,0:29:87.30:0,87,2893	0/0:20,0:20:57.18:0,57,1822	0/0:32,0:32:96.32:0,96,3040	0/0:35,0:35:99:0,105,3441	0/1:3,17:20:45.85:711,0,46	0/0:32,0:32:93.32:0,93,3070	0/1:1,5:6:3.04:224,0,3	1/1:0,11:11:30.10:484,30,0	1/1:2,15:17:15.11:467,15,0	1/1:0,8:8:0.95:215,1,0	0/0:25,0:25:75.26:0,75,2462	0/0:29,0:29:84.29:0,84,2675	0/0:29,0:29:87.26:0,87,2756	0/0:18,0:18:54.19:0,54,1637	0/0:41,0:41:99:0,123,3958	0/0:26,0:26:78.27:0,78,2481	0/0:20,0:20:60.21:0,60,1969
chr10	17001861	.	G	GAC	1257.74	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=13.014;DP=712;FS=2.090;HRun=0;HaplotypeScore=121.0799;InbreedingCoeff=0.9720;MQ=73.45;MQ0=0;MQRankSum=-12.458;QD=12.58;ReadPosRankSum=-0.862;VQSLOD=3.5554;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,126,1904	0/0:8,0:8:24.08:0,24,367	0/0:24,0:24:66.20:0,66,957	0/0:18,0:18:54.11:0,54,764	0/0:37,0:37:99:0,111,1610	0/0:34,0:34:99:0,102,1534	0/0:29,0:29:84.25:0,84,1232	1/1:14,0:12:28.19:225,28,0	0/0:31,0:31:90.29:0,90,1353	0/0:30,0:30:90.30:0,90,1361	0/0:14,0:14:42.14:0,42,642	0/0:32,0:32:93.30:0,93,1401	0/0:21,0:21:60.19:0,60,895	0/0:32,0:32:96.31:0,96,1448	0/0:36,0:36:99:0,108,1608	1/1:23,2:26:5.37:430,5,0	0/0:32,0:32:93.32:0,93,1422	1/1:7,1:10:17.87:104,18,0	1/1:14,0:14:24.83:130,25,0	1/1:19,3:25:33.74:340,34,0	1/1:11,0:11:20.16:212,20,0	0/0:27,0:27:78.25:0,78,1171	0/0:28,0:28:78.25:0,78,1171	0/0:29,0:29:84.27:0,84,1264	0/0:18,0:18:51.15:0,51,738	0/0:42,0:42:99:0,126,1890	0/0:26,0:26:75.19:0,75,1060	0/0:20,0:20:60.20:0,60,918
chr10	17002168	.	TG	T	5952.35	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=16.082;DP=714;FS=16.612;HRun=2;HaplotypeScore=87.9659;InbreedingCoeff=0.9936;MQ=85.19;MQ0=0;MQRankSum=-3.433;QD=34.01;ReadPosRankSum=-0.826;VQSLOD=2.9642;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:60,0:60:99:0,169,2471	0/0:4,0:4:12.04:0,12,180	0/0:24,0:24:72.23:0,72,1025	0/0:23,0:23:64.76:0,65,938	0/0:27,0:27:78.26:0,78,1165	0/0:18,0:18:54.18:0,54,797	0/0:27,0:27:81.27:0,81,1212	1/1:3,29:32:87.27:1115,87,0	0/0:20,0:20:57.18:0,57,834	0/0:21,0:21:60.20:0,60,892	0/0:11,0:11:33.11:0,33,491	0/0:21,0:21:63.21:0,63,943	0/0:22,0:22:60.20:0,60,895	0/0:31,0:31:93.32:0,93,1394	0/0:32,0:32:96.33:0,96,1439	1/1:0,28:28:81.26:1052,81,0	0/0:33,0:33:99:0,99,1457	1/1:0,20:20:60.20:779,60,0	1/1:3,26:29:81.25:1039,81,0	1/1:4,18:22:54.15:682,54,0	1/1:5,39:44:99:1285,99,0	0/0:29,0:29:87.29:0,87,1284	0/0:16,0:16:48.16:0,48,719	0/0:29,0:28:87.29:0,87,1304	0/0:15,0:15:39.13:0,39,584	0/0:34,0:34:99:0,102,1528	0/0:29,0:29:78.25:0,78,1143	0/0:13,0:13:30.10:0,30,450
chr10	17002214	.	T	TG	3504.43	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=7.242;DP=677;FS=3.021;HRun=4;HaplotypeScore=92.1224;InbreedingCoeff=0.9427;MQ=74.53;MQ0=0;MQRankSum=-3.595;QD=31.86;ReadPosRankSum=-3.858;VQSLOD=2.0915;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,132,1473	0/0:6,0:6:18.04:0,18,194	0/0:23,1:24:23.15:0,23,546	0/0:21,0:21:2.26:0,2,454	0/0:20,0:20:48.10:0,48,519	0/0:20,0:20:54.15:0,54,612	0/0:30,0:30:66.14:0,66,739	1/1:6,20:26:69.20:901,69,0	0/0:23,0:23:66.17:0,66,732	0/0:23,0:23:60.17:0,60,680	0/0:10,0:10:30.04:0,30,319	0/0:24,0:24:69.17:0,69,762	0/0:21,0:21:63.18:0,63,714	0/0:28,0:28:81.23:0,81,919	0/0:22,0:22:63.18:0,63,714	0/0:27,0:26:72.13:0,72,781	0/0:31,0:31:87.25:0,87,986	0/0:27,0:27:78.20:0,78,871	1/1:2,23:25:72.22:953,72,0	1/1:3,25:28:63.15:836,63,0	1/1:7,24:31:60.20:814,60,0	0/0:33,0:33:87.20:0,87,963	0/0:23,0:23:63.15:0,63,694	0/0:22,0:22:57.14:0,57,637	0/0:21,0:21:58.89:0,59,632	0/0:32,0:32:84.24:0,84,952	0/0:25,0:25:75.20:0,75,840	0/0:7,0:7:18.05:0,18,204
chr10	17002425	.	TTCTCCAG	T	18176.86	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=18.214;DP=641;FS=13.235;HRun=0;HaplotypeScore=163.4120;InbreedingCoeff=0.9954;MQ=81.59;MQ0=0;MQRankSum=-17.201;QD=55.25;ReadPosRankSum=0.110;VQSLOD=3.9292;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:41:99:0,126,4807	1/1:0,10:10:27.09:685,27,0	0/0:29,0:29:69.17:0,69,2282	0/0:22,0:22:62.67:0,63,1817	1/1:6,16:22:39.05:878,39,0	0/0:20,0:20:60.21:0,60,2358	0/0:24,0:24:66.23:0,66,2529	1/1:7,21:28:63.16:1356,63,0	0/0:23,0:23:63.22:0,63,2464	1/1:1,19:20:57.20:1420,57,0	1/1:3,11:14:33.11:765,33,0	0/0:27,0:27:81.28:0,81,3185	0/0:22,0:22:60.21:0,60,2315	0/0:25,0:25:66.23:0,66,2589	1/1:0,26:26:78.27:1980,78,0	1/1:1,26:27:63.22:1598,63,0	1/1:3,21:24:57.20:1446,57,0	1/1:3,15:18:33.11:838,33,0	1/1:4,15:19:45.15:1118,45,0	1/1:2,17:18:48.12:1050,48,0	1/1:11,12:23:28.73:477,29,0	0/0:31,0:31:81.28:0,81,3036	0/0:18,0:18:51.18:0,51,1964	0/0:29,0:28:84.29:0,84,3238	1/1:2,25:27:63.17:1536,63,0	1/1:2,22:24:63.22:1512,63,0	1/1:2,21:23:47.99:1213,48,0	1/1:1,4:5:12.04:305,12,0
chr10	17002681	.	A	ATCTGTCTGTCTG	14216.36	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-1.794;DP=652;FS=7.270;HRun=0;HaplotypeScore=218.2226;InbreedingCoeff=0.9798;MQ=71.15;MQ0=1;MQRankSum=-13.852;QD=65.21;ReadPosRankSum=-1.600;VQSLOD=3.1454;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:90.27:0,90,2889	1/1:4,2:6:9.03:516,9,0	0/0:27,0:26:24.05:0,24,531	0/0:17,0:17:20.26:0,20,483	1/1:13,8:22:24.08:1374,24,0	0/0:19,0:19:39.11:0,39,1119	0/0:29,0:29:54.17:0,54,1667	0/0:21,0:21:45.15:0,45,1422	0/0:15,0:15:36.12:0,36,1268	1/1:14,7:21:35.95:1832,36,0	1/1:15,7:22:18.06:1049,18,0	0/0:16,0:16:45.15:0,45,1585	0/0:25,0:25:63.22:0,63,2164	0/0:25,0:25:66.23:0,66,2075	1/1:7,15:24:39.13:2299,39,0	0/0:26,0:26:63.22:0,63,2161	1/1:22,6:30:27.09:1593,27,0	0/0:33,0:32:72.22:0,72,2296	0/0:21,0:21:33.11:0,33,1115	0/0:23,0:23:54.18:0,54,1712	0/0:28,0:28:48.16:0,48,1662	0/0:19,0:19:42.14:0,42,1476	0/0:18,0:18:39.13:0,39,1310	0/0:32,0:32:72.23:0,72,2342	1/1:9,0:28:43.05:1177,43,0	1/1:20,7:28:36.12:1906,36,0	1/1:18,7:29:39.13:1938,39,0	1/1:4,4:8:9.03:532,9,0
chr10	17003499	.	T	TGG	5099.04	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=9.906;DP=532;FS=64.587;HRun=3;HaplotypeScore=128.3944;InbreedingCoeff=0.9470;MQ=68.16;MQ0=0;MQRankSum=-9.659;QD=34.45;ReadPosRankSum=3.875;VQSLOD=1.0742;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:66.20:0,66,897	0/0:4,0:4:9.03:0,9,125	0/0:19,0:18:23.09:0,23,391	0/0:10,0:10:13.14:0,13,204	0/0:22,0:22:51.15:0,51,708	0/0:11,0:11:27.09:0,27,375	0/0:37,0:37:62.80:0,63,875	1/1:18,8:26:69.22:1074,69,0	0/0:10,0:10:21.07:0,21,289	0/0:21,0:21:42.10:0,42,565	0/0:12,0:12:27.09:0,27,369	0/0:18,0:18:51.13:0,51,661	0/0:13,0:13:36.11:0,36,485	0/0:15,0:15:36.12:0,36,494	0/0:19,0:19:42.14:0,42,585	1/1:15,13:28:57.04:846,57,0	0/0:24,0:24:60.16:0,60,794	1/1:9,4:13:33.06:520,33,0	1/1:19,4:23:60.20:930,60,0	1/1:24,2:26:63.21:936,63,0	1/1:28,4:32:53.77:792,54,0	0/0:14,0:14:32.40:0,32,446	0/0:16,0:16:24.06:0,24,315	0/0:25,0:24:51.04:0,51,687	0/0:14,0:14:27.09:0,27,375	0/0:22,0:22:53.69:0,54,736	0/0:27,0:27:72.24:0,72,996	0/0:1,0:1:3.01:0,3,41
chr10	17003502	.	GAT	G	3830.98	PASS	AB=0.886;AC=14;AF=0.250;AN=56;BaseQRankSum=13.506;DP=513;FS=53.807;HRun=0;HaplotypeScore=114.1221;InbreedingCoeff=0.7875;MQ=66.85;MQ0=0;MQRankSum=-9.853;QD=23.08;ReadPosRankSum=5.864;VQSLOD=1.7093;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:56.72:0,57,1053	0/0:4,0:4:9.02:0,9,122	0/1:15,3:17:55.80:56,0,335	0/1:9,1:10:26.14:26,0,148	0/0:22,0:23:37.14:0,37,688	0/0:11,0:11:30.05:0,30,458	0/0:39,0:39:75.69:0,76,995	1/1:8,16:24:65.37:780,65,0	0/0:10,0:10:24.04:0,24,366	0/0:17,0:17:42.54:0,43,680	0/0:10,0:10:27.04:0,27,387	0/0:17,0:17:48.13:0,48,747	0/0:12,0:12:36.08:0,36,474	0/0:15,0:15:36.08:0,36,572	0/0:18,0:18:51.07:0,51,645	1/1:21,3:24:43.93:354,44,0	0/0:24,0:24:62.85:0,63,814	1/1:11,2:13:19.57:157,20,0	1/1:5,15:20:56.31:773,56,0	1/1:2,24:26:67.16:919,67,0	1/1:4,26:30:53.53:766,54,0	0/0:15,0:15:21.35:0,21,549	0/0:13,0:14:28.06:0,28,455	0/0:21,0:20:50.96:0,51,784	0/0:13,0:13:27.06:0,27,422	0/0:21,0:22:57.91:0,58,778	0/0:27,0:27:74.90:0,75,950	0/0:3,0:3:8.75:0,9,76
chr10	17003574	.	AAACAGCG	A	1579.03	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.252;DP=616;FS=2.981;HRun=0;HaplotypeScore=148.9293;InbreedingCoeff=0.9688;MQ=88.18;MQ0=0;MQRankSum=-7.473;QD=52.63;ReadPosRankSum=-0.463;VQSLOD=3.2811;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,111,4358	0/0:14,0:14:42.14:0,42,1615	0/0:24,0:24:72.12:0,72,2488	0/0:21,0:21:57.20:0,57,2081	0/0:31,0:31:90.30:0,90,3528	0/0:21,0:21:63.22:0,63,2553	0/0:19,0:19:57.20:0,57,2283	0/0:37,0:37:99:0,108,3847	0/0:14,0:14:42.14:0,42,1635	0/0:30,0:30:90.31:0,90,3615	0/0:13,0:13:39.13:0,39,1596	0/0:12,0:12:36.12:0,36,1475	0/0:14,0:14:42.14:0,42,1661	0/0:17,0:17:51.18:0,51,2079	0/0:22,0:22:63.22:0,63,2471	1/1:5,18:23:54.18:1451,54,0	0/0:22,0:22:66.23:0,66,2492	1/1:3,4:7:9.03:242,9,0	0/0:19,0:19:51.18:0,51,1984	0/0:29,0:29:87.16:0,87,3130	0/0:46,0:46:99:0,129,5236	0/0:19,0:19:57.20:0,57,2258	0/0:13,0:13:36.12:0,36,1416	0/0:24,0:23:69.22:0,69,2669	0/0:21,0:21:63.22:0,63,2557	0/0:35,0:35:99:0,105,4032	0/0:22,0:22:66.23:0,66,2536	0/0:10,0:10:30.10:0,30,1229
chr10	17003724	.	A	AG	862.56	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=3.857;DP=647;FS=0.000;HRun=4;HaplotypeScore=76.2361;InbreedingCoeff=0.9949;MQ=76.26;MQ0=0;MQRankSum=-0.993;QD=25.37;ReadPosRankSum=0.721;VQSLOD=2.3829;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,111,1238	0/0:6,0:6:18.05:0,18,204	0/0:22,0:19:38.84:0,39,439	0/0:17,0:17:26.87:0,27,367	0/0:34,0:34:96.27:0,96,1088	0/0:17,0:17:51.13:0,51,567	0/0:19,0:19:53.73:0,54,578	0/0:43,0:43:99:0,99,1121	0/0:18,0:18:45.13:0,45,510	0/0:25,0:25:72.21:0,72,816	0/0:15,0:15:42.12:0,42,474	0/0:19,0:19:48.13:0,48,544	0/0:26,0:26:72.20:0,72,816	0/0:26,0:26:66.18:0,66,747	0/0:28,0:28:78.22:0,78,884	1/1:2,15:17:36.12:492,36,0	0/0:26,0:26:75.15:0,75,820	1/1:1,16:17:36.12:492,36,0	0/0:23,0:23:63.17:0,63,704	0/0:29,0:29:78.20:0,78,870	0/0:10,0:10:30.09:0,30,340	0/0:23,0:23:63.18:0,63,714	0/0:28,0:28:75.20:0,75,841	0/0:28,0:28:72.20:0,72,816	0/0:22,0:22:60.17:0,60,681	0/0:32,0:32:78.22:0,78,885	0/0:20,0:19:51.14:0,51,577	0/0:19,0:19:57.16:0,57,647
chr10	17004270	.	AGGCAGGATTGGGAGGC	A	3214.43	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.762;DP=651;FS=0.776;HRun=0;HaplotypeScore=280.6169;InbreedingCoeff=0.9810;MQ=74.09;MQ0=0;MQRankSum=-8.602;QD=100.45;ReadPosRankSum=1.203;VQSLOD=3.2454;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,120,8953	0/0:9,0:9:24.07:0,24,1380	0/0:12,0:12:33.11:0,33,2073	0/0:14,0:14:42.14:0,42,2251	0/0:29,0:29:84.29:0,84,5228	0/0:24,0:24:72.23:0,72,4818	0/0:36,0:36:99:0,105,7053	0/0:20,0:20:54.17:0,54,2751	0/0:27,0:27:81.26:0,81,5851	0/0:20,0:20:60.20:0,60,3756	0/0:17,0:17:51.18:0,51,3489	0/0:31,0:31:87.28:0,87,6485	0/0:19,0:19:54.19:0,54,4015	0/0:26,0:26:69.24:0,69,5332	0/0:34,0:34:96.33:0,96,7319	1/1:0,17:17:51.18:2351,51,0	0/0:20,0:20:57.20:0,57,4325	1/1:4,11:15:21.07:984,21,0	0/0:21,0:21:57.20:0,57,3702	0/0:17,0:17:36.12:0,36,2541	0/0:60,0:60:99:0,172,12663	0/0:25,0:25:68.46:0,68,4880	0/0:17,0:17:45.15:0,45,3197	0/0:30,0:30:84.29:0,84,5860	0/0:20,0:20:53.31:0,53,3841	0/0:27,0:27:72.25:0,72,4904	0/0:18,0:18:51.18:0,51,3512	0/0:4,0:4:12.04:0,12,817
chr10	17005289	.	ATCTC	A	1328.53	PASS	AB=1.000;AC=19;AF=0.413;AN=46;BaseQRankSum=-2.992;DP=586;FS=8.368;HRun=0;HaplotypeScore=118.4383;InbreedingCoeff=0.6746;MQ=71.01;MQ0=13;MQRankSum=2.620;QD=6.88;ReadPosRankSum=2.601;VQSLOD=2.0565;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:25.33:0,25,393	1/1:8,0:13:2.85:37,3,0	./.	0/0:40,0:20:0:0,0,0	./.	0/0:23,0:23:15.92:0,16,213	0/0:15,0:15:6.02:0,6,100	0/0:23,0:23:12.48:0,12,129	0/0:23,0:22:18.83:0,19,302	1/1:15,10:24:23.71:331,24,0	./.	0/0:20,0:19:3.01:0,3,50	0/0:20,0:20:10.25:0,10,102	0/0:19,0:19:15.03:0,15,237	1/1:25,0:24:21.06:282,21,0	1/1:13,0:14:6.49:81,6,0	1/1:12,11:23:6.02:78,6,0	1/1:12,0:12:9.03:123,9,0	0/0:29,0:27:24.08:0,24,369	0/1:22,0:22:29.91:30,0,142	0/0:31,0:30:32.14:0,32,530	./.	0/0:16,0:16:3.01:0,3,49	0/0:17,0:17:18.06:0,18,292	./.	1/1:17,9:26:16.62:295,17,0	1/1:14,0:17:14.04:204,14,0	1/1:9,0:12:3.01:37,3,0
chr10	17005333	.	CTGTGTGTGTGTGTGTGTGTGTG	C	94.97	PASS	AC=2;AF=0.038;AN=52;BaseQRankSum=0.017;DP=538;FS=6.832;HRun=0;HaplotypeScore=253.0135;InbreedingCoeff=0.3975;MQ=45.12;MQ0=28;MQRankSum=-2.170;QD=7.91;ReadPosRankSum=0.436;VQSLOD=1.2934;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:23:27.03:0,27,1317	0/0:16,0:15:4.23:0,4,231	./.	./.	0/0:32,0:32:24.08:0,24,2002	0/0:15,0:15:21.33:0,21,1408	0/0:14,0:13:10.52:0,11,1026	0/0:17,0:16:24:0,24,713	0/0:26,0:25:27.50:0,27,1861	0/0:35,0:33:65.03:0,65,3105	0/0:15,0:14:6.91:0,7,516	0/0:15,0:14:20.92:0,21,1641	0/0:15,0:14:24:0,24,1408	0/0:17,0:17:26.98:0,27,1908	0/0:21,0:18:15.52:0,16,1038	1/1:5,7:12:2.53:171,3,0	0/0:24,0:23:24.46:0,24,1319	0/0:10,0:10:3.31:0,3,63	0/0:19,0:17:21.02:0,21,1013	0/0:17,0:16:26.89:0,27,1548	0/0:47,0:41:69.23:0,69,4575	0/0:20,0:20:18.06:0,18,1465	0/0:12,0:12:12.04:0,12,1097	0/0:29,0:28:48.16:0,48,3630	0/0:29,0:27:24:0,24,1587	0/0:23,0:22:42.14:0,42,2683	0/0:19,0:18:27.09:0,27,1518	0/0:12,0:7:3.01:0,3,240
chr10	17005746	.	A	AC	1359.51	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.085;DP=762;FS=1.350;HRun=2;HaplotypeScore=97.4681;InbreedingCoeff=0.9976;MQ=80.25;MQ0=0;MQRankSum=-5.578;QD=34.86;ReadPosRankSum=-0.390;VQSLOD=3.4710;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:58:99:0,162,1984	0/0:8,0:8:21.07:0,21,260	0/0:24,0:24:69.20:0,69,820	0/0:15,0:15:45.09:0,45,517	0/0:21,0:21:54.17:0,54,669	0/0:30,0:30:90.28:0,90,1115	0/0:33,0:33:93.29:0,93,1153	0/0:27,0:27:78.24:0,78,956	0/0:40,0:40:99:0,117,1436	0/0:26,0:26:75.23:0,75,917	0/0:25,0:24:69.15:0,69,836	0/0:32,0:32:93.29:0,93,1150	0/0:30,0:30:81.22:0,81,978	0/0:30,0:30:87.24:0,87,1050	0/0:32,0:32:96.25:0,96,1160	1/1:1,21:22:66.15:919,66,0	0/0:37,0:37:99:0,105,1287	1/1:2,14:17:42.05:562,42,0	0/0:18,0:18:51.13:0,51,607	0/0:21,0:21:60.19:0,60,743	0/0:52,0:52:99:0,156,1871	0/0:31,0:31:90.20:0,90,1082	0/0:21,0:21:60.19:0,60,743	0/0:37,0:37:99:0,111,1333	0/0:17,0:17:45.14:0,45,557	0/0:32,0:32:96.29:0,96,1177	0/0:11,0:11:30.08:0,30,355	0/0:15,0:15:39.11:0,39,470
chr10	17006364	.	G	GT	2313.11	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=11.466;DP=654;FS=4.164;HRun=0;HaplotypeScore=75.8424;InbreedingCoeff=0.9967;MQ=87.19;MQ0=0;MQRankSum=-2.243;QD=43.64;ReadPosRankSum=0.659;VQSLOD=4.1937;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,120,1624	0/0:7,0:7:21.06:0,21,277	0/0:29,0:29:63.72:0,64,1122	0/0:16,0:16:44.65:0,45,541	0/0:17,0:17:51.17:0,51,712	0/0:17,0:17:45.15:0,45,629	0/0:37,0:37:99:0,111,1545	0/0:18,0:18:51.16:0,51,699	0/0:22,0:22:66.21:0,66,906	0/0:32,0:32:90.26:0,90,1216	0/0:11,0:11:30.09:0,30,401	0/0:28,0:28:84.28:0,84,1174	0/0:28,0:28:84.28:0,84,1174	0/0:22,0:22:66.20:0,66,892	0/0:34,0:34:99:0,102,1388	1/1:0,32:33:99:1573,99,0	0/0:26,0:26:78.23:0,78,1054	1/1:2,18:20:54.18:862,54,0	0/0:25,0:25:72.18:0,72,952	0/0:10,0:10:30.09:0,30,402	0/0:40,0:40:99:0,120,1659	0/0:19,0:19:57.18:0,57,774	0/0:11,0:11:33.11:0,33,459	0/0:31,0:31:90.30:0,90,1258	0/0:15,0:15:42.13:0,42,572	0/0:35,0:35:99:0,105,1391	0/0:22,0:22:66.20:0,66,904	0/0:9,0:9:27.09:0,27,373
chr10	17006660	.	TC	T	287.37	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.159;DP=613;FS=19.079;HRun=2;HaplotypeScore=63.7759;InbreedingCoeff=0.9357;MQ=87.95;MQ0=0;MQRankSum=-3.715;QD=20.53;ReadPosRankSum=-1.486;VQSLOD=2.0345;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,144,2068	0/0:6,0:6:18.06:0,18,258	0/0:20,0:20:50.55:0,51,700	0/0:31,0:31:52.66:0,53,1013	0/0:14,0:14:42.12:0,42,586	0/0:18,0:18:54.17:0,54,786	0/0:24,0:24:69.23:0,69,1032	0/0:26,0:26:75.25:0,75,1103	0/0:16,0:16:48.15:0,48,699	0/0:30,0:30:87.28:0,87,1285	0/0:13,0:13:39.13:0,39,582	0/0:28,0:28:84.28:0,84,1256	0/0:18,0:18:54.18:0,54,808	0/0:23,0:23:69.23:0,69,1029	0/0:29,0:29:84.28:0,84,1256	1/1:0,9:9:27.09:341,27,0	0/0:53,0:53:99:0,160,2334	1/1:1,4:5:5.97:58,6,0	0/0:18,0:18:51.17:0,51,757	0/0:15,0:15:45.15:0,45,673	0/0:37,0:37:99:0,111,1622	0/0:8,0:8:21.05:0,21,293	0/0:13,0:13:32.63:0,33,492	0/0:37,0:36:99:0,105,1538	0/0:21,0:21:63.20:0,63,919	0/0:24,0:24:69.03:0,69,1033	0/0:18,0:18:51.17:0,51,764	0/0:10,0:10:30.10:0,30,450
chr10	17006672	.	C	CTG	455.30	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.493;DP=620;FS=11.845;HRun=0;HaplotypeScore=79.7446;InbreedingCoeff=0.9262;MQ=85.35;MQ0=0;MQRankSum=-4.294;QD=28.46;ReadPosRankSum=-1.573;VQSLOD=3.7248;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,150,2247	0/0:4,0:4:12.04:0,12,184	0/0:19,0:20:42.19:0,42,767	0/0:27,0:27:74.72:0,75,1050	0/0:15,0:15:45.14:0,45,665	0/0:15,0:15:39.12:0,39,573	0/0:27,0:27:81.23:0,81,1171	0/0:20,0:20:48.16:0,48,717	0/0:16,0:16:48.15:0,48,710	0/0:32,0:32:90.30:0,90,1355	0/0:15,0:15:39.12:0,39,574	0/0:29,0:29:84.26:0,84,1243	0/0:20,0:20:57.14:0,57,821	0/0:20,0:20:60.20:0,60,915	0/0:29,0:29:87.26:0,87,1288	1/1:1,8:9:24.08:451,24,0	0/0:55,0:55:99:0,156,2335	1/1:1,6:7:6.02:116,6,0	0/0:17,0:17:48.14:0,48,711	0/0:15,0:15:45.14:0,45,662	0/0:40,0:40:99:0,120,1771	0/0:10,0:10:30.06:0,30,396	0/0:17,0:17:42.14:0,42,637	0/0:37,0:36:99:0,111,1655	0/0:20,0:20:57.17:0,57,846	0/0:26,0:26:71.90:0,72,1100	0/0:18,0:18:48.16:0,48,732	0/0:10,0:10:30.10:0,30,453
chr10	17007737	.	A	AGCAGCAGCAGTG	6687.68	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=10.194;DP=855;FS=3.814;HRun=0;HaplotypeScore=297.8145;InbreedingCoeff=0.9997;MQ=65.87;MQ0=0;MQRankSum=-10.488;QD=142.29;ReadPosRankSum=1.121;VQSLOD=4.6700;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:56:99:0,160,5802	0/0:12,0:12:36.12:0,36,1353	0/0:29,0:27:69.22:0,69,2297	0/0:24,0:24:63.12:0,63,2104	0/0:22,0:22:57.17:0,57,1868	0/0:21,0:21:60.16:0,60,2023	0/0:44,0:44:99:0,129,4492	0/0:26,0:26:63.21:0,63,2202	0/0:36,0:36:99:0,105,3687	0/0:25,0:25:75.26:0,75,2627	0/0:20,0:20:57.18:0,57,1968	0/0:41,0:41:99:0,120,4211	0/0:48,0:48:99:0,141,5106	0/0:42,0:42:99:0,126,4364	0/0:32,0:32:93.32:0,93,3374	1/1:14,15:29:78.27:4564,78,0	0/0:40,0:40:99:0,111,3846	1/1:10,8:18:39.13:2123,39,0	0/0:25,0:25:66.22:0,66,2179	0/0:17,0:17:51.16:0,51,1715	0/0:84,0:84:99:0,229,8068	0/0:22,0:22:60.21:0,60,2256	0/0:13,0:13:36.12:0,36,1244	0/0:47,0:47:99:0,138,5077	0/0:13,0:13:39.10:0,39,1365	0/0:28,0:28:75.26:0,75,2708	0/0:30,0:30:84.27:0,84,3129	0/0:11,0:11:33.11:0,33,1143
chr10	17007766	.	C	CAGCCAA	3152.46	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=2.328;DP=895;FS=0.000;HRun=0;HaplotypeScore=194.1426;InbreedingCoeff=0.9812;MQ=65.41;MQ0=0;MQRankSum=-9.807;QD=80.83;ReadPosRankSum=-0.463;VQSLOD=3.9940;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:60,0:60:99:0,178,4120	0/0:10,0:10:30.10:0,30,687	0/0:27,0:26:69.24:0,69,1481	0/0:23,0:23:60.20:0,60,1258	0/0:25,0:25:66.23:0,66,1533	0/0:19,0:19:54.19:0,54,1191	0/0:47,0:47:99:0,120,2878	0/0:26,0:26:63.21:0,63,1406	0/0:32,0:32:90.28:0,90,1955	0/0:29,0:29:78.27:0,78,1798	0/0:18,0:18:54.19:0,54,1257	0/0:38,0:38:99:0,108,2363	0/0:44,0:44:99:0,129,2866	0/0:49,0:49:99:0,147,3341	0/0:38,0:38:99:0,105,2425	1/1:8,11:19:57.20:1925,57,0	0/0:50,0:50:99:0,150,3399	1/1:5,11:20:11.41:1343,11,0	0/0:27,0:27:72.25:0,72,1615	0/0:21,0:21:57.18:0,57,1280	0/0:83,0:83:99:0,232,5259	0/0:28,0:28:78.27:0,78,1770	0/0:21,0:21:60.19:0,60,1341	0/0:58,0:58:99:0,166,3783	0/0:15,0:15:45.15:0,45,1053	0/0:26,0:26:78.27:0,78,1802	0/0:30,0:30:84.29:0,84,1958	0/0:12,0:12:36.12:0,36,825
chr10	17009134	.	AGGAGAGGCCCTTGTGGTCTATCCAG	A	18764.85	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=13.797;DP=489;FS=1.927;HRun=0;HaplotypeScore=308.4670;InbreedingCoeff=0.9670;MQ=81.40;MQ0=0;MQRankSum=-11.056;QD=80.54;ReadPosRankSum=2.738;VQSLOD=3.7047;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,123,11866	1/1:3,7:10:15.05:1010,15,0	0/0:15,0:15:36.11:0,36,1971	0/0:20,0:21:48.12:0,48,2568	1/1:5,8:13:21.07:1079,21,0	0/0:12,0:12:33.11:0,33,3365	0/0:27,0:27:75.26:0,75,7116	1/1:7,5:12:12.01:311,12,0	0/0:21,0:21:63.22:0,63,6765	1/1:2,10:12:30.09:1714,30,0	1/1:2,7:9:9.03:547,9,0	0/0:25,0:25:69.24:0,69,7803	0/0:19,0:19:57.18:0,57,5715	0/0:21,0:21:63.22:0,63,5968	1/1:5,10:15:24.08:1621,24,0	1/1:4,16:20:33.11:2227,33,0	1/1:8,13:20:21.07:1419,21,0	1/1:9,10:19:18.06:1087,18,0	1/1:5,10:15:30.09:1136,30,0	1/1:1,9:10:21.07:1193,21,0	1/1:17,14:31:12.04:695,12,0	0/0:12,0:12:33.11:0,33,3245	0/0:11,0:11:27.09:0,27,2777	0/0:30,0:30:87.30:0,87,9282	1/1:3,7:10:9.03:608,9,0	1/1:3,9:12:27.09:1548,27,0	1/1:8,8:16:24.08:1558,24,0	1/1:1,7:8:15.05:1013,15,0
chr10	17009997	.	A	AGCAGAGCTGTACGTAGCCCAGGCAG	33272.44	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=1.187;DP=729;FS=5.970;HRun=0;HaplotypeScore=434.3852;InbreedingCoeff=0.9765;MQ=73.04;MQ0=0;MQRankSum=-14.771;QD=147.88;ReadPosRankSum=-0.590;VQSLOD=3.6287;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:56:99:0,166,10139	1/1:10,1:12:24.08:1681,24,0	0/0:16,0:16:39.13:0,39,1669	0/0:15,0:15:33.11:0,33,863	1/1:21,0:22:11.33:822,11,0	0/0:17,0:17:51.17:0,51,2602	0/0:28,0:28:84.25:0,84,4665	0/0:30,0:30:75.25:0,75,3082	0/0:28,0:28:78.25:0,78,4103	1/1:18,2:45:99:7946,117,0	1/1:15,0:15:6.02:665,6,0	0/0:37,0:37:99:0,105,5936	0/0:15,0:15:45.15:0,45,2470	0/0:27,0:27:78.27:0,78,4360	1/1:16,5:33:57.20:5436,57,0	0/0:36,0:36:99:0,102,5966	1/1:11,2:22:30.10:3005,30,0	0/0:27,0:27:78.27:0,78,4997	0/0:23,0:23:26.55:0,27,3069	0/0:16,0:16:42.13:0,42,2153	0/0:42,0:42:99:0,123,6834	0/0:17,0:17:45.15:0,45,2433	0/0:15,0:15:39.13:0,39,2142	0/0:35,0:35:96.31:0,96,5918	0/0:24,0:24:69.24:0,69,3885	1/1:18,3:45:99:8747,117,0	1/1:13,1:22:42.14:2863,42,0	1/1:6,2:9:21.07:2108,21,0
chr10	17011172	.	ACTCC	A	8217.52	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=9.467;DP=397;FS=4.857;HRun=0;HaplotypeScore=79.1629;InbreedingCoeff=0.9613;MQ=94.55;MQ0=2;MQRankSum=-3.744;QD=39.70;ReadPosRankSum=1.574;VQSLOD=4.7497;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:66.21:0,66,1670	1/1:2,0:2:5.99:50,6,0	0/0:26,0:25:54.62:0,55,1049	0/0:39,0:36:53.54:0,54,1251	1/1:1,12:13:29.88:417,30,0	0/0:8,0:8:24.08:0,24,628	0/0:16,0:16:45.13:0,45,1045	1/1:2,11:13:30.05:452,30,0	0/0:8,0:8:24.08:0,24,618	1/1:1,6:7:15.04:243,15,0	1/1:0,7:7:15.01:238,15,0	0/0:8,0:8:24.08:0,24,628	0/0:17,0:17:48.15:0,48,1146	0/0:6,0:6:12.04:0,12,313	1/1:3,19:21:45.14:817,45,0	1/1:0,11:11:27.09:488,27,0	1/1:0,25:24:57.20:1035,57,0	1/1:0,23:22:63.22:1143,63,0	1/1:2,15:16:45.09:713,45,0	1/1:0,7:7:15.05:272,15,0	1/1:2,11:13:23.97:398,24,0	0/0:5,0:5:15.05:0,15,393	0/0:8,0:8:24.07:0,24,548	0/0:22,0:22:66.23:0,66,1691	1/1:0,4:4:9.03:163,9,0	1/1:1,13:14:33.10:571,33,0	1/1:2,20:22:54.18:962,54,0	1/1:0,7:7:17.95:256,18,0
chr10	17013395	.	C	CGGAGT	7659.18	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-10.127;DP=684;FS=1.877;HRun=0;HaplotypeScore=124.1889;InbreedingCoeff=0.9953;MQ=84.88;MQ0=0;MQRankSum=-10.060;QD=63.30;ReadPosRankSum=-3.468;VQSLOD=4.9452;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,102,2039	0/0:13,0:13:36.12:0,36,746	0/0:16,0:16:45.11:0,45,778	0/0:29,0:29:75.25:0,75,1437	0/0:14,0:14:42.09:0,42,778	0/0:24,0:24:69.24:0,69,1414	0/0:33,0:33:81.20:0,81,1549	1/1:8,24:33:93.29:2537,93,0	0/0:19,0:19:54.14:0,54,1077	0/0:19,0:19:54.18:0,54,1087	0/0:16,0:16:45.12:0,45,858	0/0:25,0:25:69.22:0,69,1375	0/0:24,0:24:63.19:0,63,1252	0/0:34,0:34:87.28:0,87,1744	0/0:38,0:38:99:0,99,2014	0/0:14,0:14:39.13:0,39,805	0/0:33,0:33:87.28:0,87,1764	0/0:28,0:28:84.22:0,84,1622	1/1:11,16:28:66.22:1775,66,0	1/1:2,15:19:33.07:933,33,0	1/1:10,30:41:81.23:2414,81,0	0/0:19,0:19:45.13:0,45,840	0/0:11,0:11:30.10:0,30,622	0/0:33,0:33:93.31:0,93,1890	0/0:28,0:28:75.18:0,75,1434	0/0:33,0:33:93.28:0,93,1769	0/0:16,0:15:45.15:0,45,930	0/0:5,0:5:15.05:0,15,311
chr10	17017193	.	C	CA	14373.14	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=-16.759;DP=623;FS=3.930;HRun=6;HaplotypeScore=54.4758;InbreedingCoeff=0.9653;MQ=76.87;MQ0=0;MQRankSum=-0.356;QD=41.78;ReadPosRankSum=2.800;VQSLOD=2.4042;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,132,1777	1/1:0,6:6:18.06:287,18,0	0/0:13,0:13:32.32:0,32,406	0/0:11,0:11:20.77:0,21,228	1/1:0,18:20:51.17:804,51,0	0/0:15,0:15:45.14:0,45,612	0/0:28,0:28:84.21:0,84,1101	1/1:0,19:19:57.19:896,57,0	0/0:20,0:20:60.20:0,60,838	1/1:0,27:27:81.28:1281,81,0	1/1:0,9:9:24.08:383,24,0	0/0:41,0:41:99:0,123,1702	0/0:20,0:20:60.20:0,60,838	0/0:25,0:25:75.24:0,75,1033	1/1:0,23:23:60.20:958,60,0	1/1:0,23:23:60.20:958,60,0	1/1:2,28:30:0.92:1117,1,0	1/1:1,25:26:57.19:907,57,0	1/1:1,22:23:66.19:1006,66,0	1/1:0,16:16:48.16:754,48,0	1/1:1,38:39:99:1629,102,0	0/0:20,0:20:60.18:0,60,809	0/0:20,0:20:60.20:0,60,835	0/0:21,0:21:63.11:0,63,819	1/1:0,20:21:60.20:946,60,0	1/1:0,22:23:67.78:1058,68,0	1/1:0,24:24:61.09:958,61,0	1/1:1,14:15:27.09:430,27,0
chr10	17017818	.	T	TG	6844.48	PASS	AB=0.774;AC=54;AF=0.964;AN=56;BaseQRankSum=-2.844;DP=255;FS=0.000;HRun=1;HaplotypeScore=39.3028;InbreedingCoeff=-0.0643;MQ=60.87;MQ0=0;MQRankSum=-2.662;QD=26.84;ReadPosRankSum=1.217;VQSLOD=4.5094;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,17:19:13.06:429,13,0	1/1:1,5:6:15:181,15,0	0/1:3,1:4:21.95:36,0,22	0/1:4,1:3:8.55:56,0,9	1/1:1,2:3:5.95:62,6,0	1/1:0,9:9:26.98:327,27,0	1/1:0,15:15:35.74:409,36,0	1/1:1,9:10:24.08:356,24,0	1/1:0,15:15:44.84:533,45,0	1/1:0,15:15:42.07:559,42,0	1/1:2,1:3:3.01:44,3,0	1/1:0,10:10:29.51:256,30,0	1/1:0,15:15:41.43:351,41,0	1/1:0,9:9:23.77:218,24,0	1/1:1,5:6:11.97:141,12,0	1/1:1,13:14:35.87:408,36,0	1/1:2,12:14:27.04:372,27,0	1/1:1,8:9:18.06:269,18,0	1/1:3,5:8:21.07:297,21,0	1/1:2,0:2:3:26,3,0	1/1:1,14:15:26.98:317,27,0	1/1:1,8:9:17.99:215,18,0	1/1:5,5:10:17.86:167,18,0	1/1:0,10:10:12.04:160,12,0	1/1:3,3:6:11.97:131,12,0	1/1:0,7:7:21.05:289,21,0	1/1:0,5:5:14.98:191,15,0	1/1:0,1:1:3.01:45,3,0
chr10	17018495	.	A	AAC	846.17	PASS	AB=1.000;AC=32;AF=0.640;AN=50;BaseQRankSum=-0.649;DP=501;FS=3.751;HRun=0;HaplotypeScore=92.8682;InbreedingCoeff=0.2861;MQ=68.17;MQ0=6;MQRankSum=-1.203;QD=2.64;ReadPosRankSum=-0.051;VQSLOD=2.0364;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:26:5.99:6,0,18	1/1:2,0:2:3.01:42,3,0	./.	./.	1/1:4,1:12:6:52,6,0	1/1:12,0:12:11.99:128,12,0	0/0:26,0:26:4.66:0,5,27	1/1:25,0:25:2.13:5,2,0	0/1:12,0:12:0:0,0,0	1/1:17,0:15:11.99:132,12,0	0/1:9,0:9:18.93:19,0,26	0/0:23,0:23:9.72:0,10,97	0/1:12,0:14:8.13:28,0,8	0/0:9,0:9:3.01:0,3,32	1/1:26,0:26:12.01:129,12,0	0/0:10,0:13:5.57:0,6,28	1/1:11,11:23:6.01:70,6,0	0/0:15,0:25:14.20:0,14,70	1/1:22,0:22:3.45:22,3,0	1/1:10,0:10:2.90:39,3,0	1/1:31,0:30:8.97:88,9,0	0/1:21,0:21:18.93:19,0,26	./.	0/0:26,0:26:18.03:0,18,184	1/1:12,0:11:3:25,3,0	0/1:13,0:13:14.24:61,0,14	1/1:24,0:23:5.98:86,6,0	1/1:5,3:8:6.46:50,6,0
chr10	17020218	.	A	ACT	2672.21	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-10.358;DP=659;FS=0.489;HRun=0;HaplotypeScore=93.0882;InbreedingCoeff=0.9976;MQ=73.62;MQ0=1;MQRankSum=0.295;QD=24.07;ReadPosRankSum=-2.333;VQSLOD=3.8059;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:84.15:0,84,986	0/0:8,0:8:21.07:0,21,262	0/0:33,0:31:47.98:0,48,518	0/0:37,0:31:48.97:0,49,548	0/0:12,0:12:24.07:0,24,300	0/0:18,0:18:42.02:0,42,430	0/0:23,0:24:50.89:0,51,533	1/1:9,17:27:51.14:755,51,0	0/0:19,0:19:51.12:0,51,597	0/0:13,0:13:27.08:0,27,328	0/0:13,0:14:32.68:0,33,383	0/0:29,0:29:81.24:0,81,998	0/0:28,0:29:78.06:0,78,938	0/0:26,0:26:69.15:0,69,807	0/0:15,0:15:42.11:0,42,499	0/0:26,0:26:69.16:0,69,819	0/0:34,0:35:84.07:0,84,1005	0/0:35,0:35:75.08:0,75,846	1/1:3,9:14:32.69:349,33,0	1/1:3,12:15:30.10:488,30,0	1/1:7,29:37:54.18:890,54,0	0/0:26,0:26:60.07:0,60,642	0/0:17,0:18:39.12:0,39,481	0/0:36,0:36:87.14:0,87,977	1/1:6,12:18:24.04:366,24,0	0/0:23,0:23:57.15:0,57,670	0/0:20,0:20:57.15:0,57,684	0/0:17,0:17:39.03:0,39,417
chr10	17021626	.	CAT	C	535.39	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=5.341;DP=269;FS=17.374;HRun=0;HaplotypeScore=54.6454;InbreedingCoeff=0.5733;MQ=54.92;MQ0=6;MQRankSum=-5.527;QD=5.15;ReadPosRankSum=-2.519;VQSLOD=0.4773;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:0.83:0,1,356	0/0:4,0:4:1.24:0,1,38	1/1:6,0:2:2.04:6,2,0	0/0:6,0:2:0.47:0,0,1	0/0:9,0:8:16.38:0,16,124	0/0:13,0:12:33.01:0,33,388	0/0:4,0:4:12:0,12,161	1/1:36,0:34:5.30:266,5,0	0/0:9,0:9:27.07:0,27,434	0/0:15,0:15:8.25:0,8,320	0/0:14,0:14:35.08:0,35,384	0/0:5,0:5:14.84:0,15,244	0/0:4,0:4:11.82:0,12,154	0/0:2,0:2:6:0,6,72	0/0:12,0:12:25.87:0,26,242	1/1:0,2:2:3.01:44,3,0	0/0:16,0:15:16.71:0,17,223	1/1:0,9:9:12:149,12,0	0/1:14,0:12:52.49:52,0,81	1/1:18,0:18:24.72:110,25,0	1/1:12,0:11:0.34:1,0,0	0/0:2,0:2:2.80:0,3,13	0/0:2,0:2:6.01:0,6,83	0/0:2,0:2:6.02:0,6,115	1/1:7,0:7:13.66:63,14,0	0/0:15,0:15:41.68:0,42,465	0/0:6,0:6:14.31:0,14,138	0/0:10,0:9:21.67:0,22,189
chr10	17021638	.	CAT	C	1929.26	PASS	AB=0.792;AC=30;AF=0.577;AN=52;BaseQRankSum=6.781;DP=269;FS=0.000;HRun=0;HaplotypeScore=55.1445;InbreedingCoeff=0.2222;MQ=53.49;MQ0=7;MQRankSum=-0.811;QD=8.50;ReadPosRankSum=2.438;VQSLOD=3.1423;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:12,3:15:8.71:9,0,284	1/1:0,3:4:8.86:85,9,0	0/0:4,0:1:0.47:0,0,1	0/0:3,0:2:0:0,0,0	1/1:1,5:7:14.71:135,15,0	0/1:14,0:13:5.55:6,0,324	0/0:4,0:4:12.04:0,12,187	1/1:22,0:36:12.99:163,13,0	0/0:10,0:10:15.04:0,15,208	0/1:5,7:13:20.51:220,0,21	0/1:6,9:16:29.73:161,0,30	0/1:4,1:5:20.69:21,0,169	0/1:4,1:5:20.70:21,0,153	0/0:3,0:3:3.01:0,3,48	1/1:3,8:12:17.89:193,18,0	./.	1/1:4,11:16:29.75:309,30,0	0/1:10,0:10:0.91:4,0,1	1/1:6,0:11:18.23:87,18,0	1/1:6,0:19:22.73:112,23,0	./.	1/1:0,1:1:3.01:36,3,0	0/0:1,0:1:3.01:0,3,48	0/0:2,0:2:6.02:0,6,96	1/1:2,0:4:2.84:14,3,0	1/1:7,9:16:23.87:240,24,0	0/1:1,4:6:14.41:95,0,14	1/1:4,7:10:15.05:179,15,0
chr10	17021897	.	TG	T	843.13	PASS	AB=0.895;AC=19;AF=0.365;AN=52;BaseQRankSum=4.565;DP=409;FS=24.380;HRun=12;HaplotypeScore=61.0247;InbreedingCoeff=-0.0654;MQ=72.63;MQ0=1;MQRankSum=-0.130;QD=3.28;ReadPosRankSum=6.272;VQSLOD=-0.5965;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:11,4:15:41.97:73,0,42	./.	0/1:9,0:9:21.73:34,0,22	0/1:17,0:14:15.30:15,0,72	0/0:9,0:9:6.01:0,6,56	0/0:10,0:10:3.01:0,3,30	0/1:17,5:24:55.12:116,0,55	1/1:17,6:25:11.32:62,11,0	0/1:13,0:13:9.05:9,0,60	0/0:8,0:8:5.98:0,6,52	0/1:3,1:4:17.22:17,0,24	0/1:22,0:23:38.34:57,0,38	0/0:17,0:17:0:0,0,0	0/1:17,1:18:21.52:37,0,22	0/0:28,0:28:3.95:0,4,169	0/0:23,0:24:14.44:0,14,119	0/1:17,3:20:28.46:28,0,91	0/0:9,0:9:12.88:0,13,110	1/1:9,6:15:24.73:158,25,0	1/1:5,0:5:4.79:28,5,0	1/1:25,8:37:39.67:269,40,0	0/0:6,0:6:3.01:0,3,30	0/0:3,0:3:0:0,0,0	0/0:22,0:22:32.89:0,33,273	./.	0/1:10,3:13:18.36:58,0,18	0/1:15,2:17:33.93:34,0,41	0/0:7,0:7:2.99:0,3,24
chr10	17025429	.	TAC	T	419.48	PASS	AB=0.949;AC=17;AF=0.304;AN=56;BaseQRankSum=10.201;DP=689;FS=2.286;HRun=0;HaplotypeScore=110.6354;InbreedingCoeff=0.4436;MQ=56.39;MQ0=38;MQRankSum=-6.850;QD=1.60;ReadPosRankSum=-0.582;VQSLOD=1.8255;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:62.83:0,63,864	0/0:11,0:10:9.98:0,10,36	0/0:58,0:26:23.42:0,23,268	0/0:53,0:19:16.86:0,17,211	0/1:19,0:18:5.64:6,0,40	0/1:23,3:26:17.25:17,0,703	0/0:33,0:33:4.61:0,5,1141	0/1:33,0:33:25.05:25,0,27	0/0:18,0:18:48.15:0,48,730	0/0:23,0:16:23.07:0,23,111	0/0:12,0:11:6.04:0,6,37	0/0:22,0:22:45.15:0,45,712	0/0:19,0:19:6.60:0,7,577	0/1:27,2:29:5.26:5,0,880	0/0:19,0:17:1.35:0,1,58	1/1:21,0:21:30.66:138,31,0	1/1:28,0:26:26.52:110,27,0	1/1:18,0:16:13.92:63,14,0	1/1:13,0:12:7.67:36,8,0	1/1:25,0:19:1.63:74,2,0	0/0:32,0:25:2.69:0,3,19	0/0:18,1:19:10.63:0,11,623	0/0:17,0:17:39.13:0,39,590	0/1:28,2:31:10.96:11,0,903	1/1:19,0:16:24.69:110,25,0	0/0:19,0:17:15.89:0,16,94	0/0:22,0:17:19.73:0,20,100	0/0:17,0:16:31.68:0,32,253
chr10	17025444	.	ACACACAC	A	3764.38	PASS	AB=0.994;AC=18;AF=0.321;AN=56;BaseQRankSum=5.632;DP=816;FS=29.712;HRun=0;HaplotypeScore=153.2047;InbreedingCoeff=0.4256;MQ=47.96;MQ0=98;MQRankSum=-6.497;QD=13.25;ReadPosRankSum=-2.224;VQSLOD=1.1343;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,99,2431	0/1:8,0:6:23.09:23,0,220	0/0:77,0:20:36.10:0,36,561	0/0:65,0:16:31.94:0,32,616	0/1:28,0:20:33.87:34,0,493	0/0:24,0:24:65.03:0,65,2029	0/0:37,0:37:96.47:0,96,2832	1/1:5,24:28:66.21:944,66,0	0/0:30,0:29:81.20:0,81,2286	0/1:30,0:14:8.91:9,0,393	0/1:17,0:13:87.39:87,0,251	0/0:22,0:22:59.23:0,59,1812	0/0:17,0:16:46.96:0,47,1413	0/0:31,0:31:90.26:0,90,2688	0/0:20,0:13:29.07:0,29,470	1/1:6,19:22:36.12:859,36,0	0/1:28,0:24:41.32:41,0,101	1/1:9,14:16:21.04:433,21,0	1/1:3,12:12:27.08:439,27,0	1/1:9,17:18:30:709,30,0	0/0:21,23:28:2.16:0,2,37	0/0:23,0:23:62.95:0,63,1587	0/0:17,0:17:48.16:0,48,1650	0/0:37,0:36:96.20:0,96,2666	1/1:27,0:20:12:131,12,0	0/1:27,0:15:53.91:54,0,442	0/0:22,0:14:0.88:0,1,568	0/0:24,0:17:0.96:0,1,646
chr10	17025446	.	ACACAC	A	3701.67	PASS	AB=0.996;AC=22;AF=0.393;AN=56;BaseQRankSum=8.994;DP=828;FS=29.697;HRun=0;HaplotypeScore=133.8068;InbreedingCoeff=0.3948;MQ=49.41;MQ0=105;MQRankSum=-4.931;QD=10.40;ReadPosRankSum=-1.297;VQSLOD=1.3732;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:64.77:0,65,1929	0/1:8,0:6:23.10:23,0,115	0/0:76,0:18:36.09:0,36,502	0/0:68,0:19:18.28:0,18,558	0/1:28,0:18:52.06:52,0,212	0/0:25,0:25:68.04:0,68,1636	0/0:37,0:37:90.16:0,90,2219	1/1:29,0:28:66.21:856,66,0	0/0:30,0:29:81.20:0,81,1809	0/1:31,0:15:99:99,0,188	0/1:18,0:14:92.68:93,0,113	0/0:24,0:24:64.31:0,64,1534	0/0:17,0:16:46.96:0,47,1153	0/0:31,0:31:90.26:0,90,2123	0/1:20,0:13:19.55:20,0,216	1/1:25,0:22:36.12:490,36,0	1/1:24,4:24:22.94:270,23,0	1/1:23,0:16:21.07:281,21,0	1/1:15,0:12:27.08:339,27,0	1/1:27,0:18:30.10:403,30,0	0/0:43,0:27:1.12:0,1,5	0/0:24,0:24:56.55:0,57,1316	0/0:16,0:16:48.16:0,48,1271	0/0:36,0:35:92.86:0,93,2141	1/1:8,19:20:27.09:559,27,0	0/1:30,1:17:99:188,0,209	0/1:22,0:14:24.19:24,0,278	0/1:24,0:17:4.80:5,0,336
chr10	17025448	.	ACAC	A	3773.67	PASS	AB=0.972;AC=24;AF=0.429;AN=56;BaseQRankSum=9.694;DP=821;FS=40.900;HRun=0;HaplotypeScore=111.9165;InbreedingCoeff=0.5279;MQ=49.44;MQ0=105;MQRankSum=-4.950;QD=10.72;ReadPosRankSum=-1.138;VQSLOD=1.2785;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:67.77:0,68,1569	0/1:8,0:6:13.71:27,0,14	0/0:75,0:14:39.09:0,39,492	0/0:70,0:21:25.68:0,26,524	1/1:26,3:19:1.85:258,2,0	0/0:26,0:26:70.02:0,70,1266	0/0:37,0:37:90.17:0,90,1760	1/1:26,0:25:66.19:808,66,0	0/0:30,0:29:81.20:0,81,1415	0/1:31,0:15:1.18:157,0,1	1/1:16,1:13:0.09:153,0,0	0/0:24,0:24:63.99:0,64,1195	0/0:17,0:16:46.96:0,47,892	0/0:30,0:30:89.11:0,89,1614	0/1:17,3:13:36.11:114,0,36	1/1:25,0:22:36.03:344,36,0	1/1:10,17:23:30.09:423,30,0	1/1:23,0:16:21.03:212,21,0	1/1:15,0:12:27.06:303,27,0	1/1:27,0:18:30.05:310,30,0	0/0:41,0:26:1.51:0,2,6	0/0:24,0:24:32.36:0,32,1014	0/0:17,0:17:51.17:0,51,990	0/0:36,0:35:91.77:0,92,1671	1/1:27,0:20:27.51:260,28,0	0/1:31,0:17:3.95:231,0,4	0/1:22,0:14:25.17:116,0,25	0/1:23,1:17:55.95:59,0,56
chr10	17025450	.	AC	A	5258.05	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=11.431;DP=818;FS=20.189;HRun=2;HaplotypeScore=88.5377;InbreedingCoeff=0.9732;MQ=50.43;MQ0=105;MQRankSum=-1.928;QD=13.55;ReadPosRankSum=3.206;VQSLOD=2.7990;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:38,1:39:67.74:0,68,1269	1/1:2,6:6:15.05:194,15,0	0/0:78,0:17:48.10:0,48,549	0/0:72,0:23:22.61:0,23,460	1/1:6,22:18:41.72:475,42,0	0/0:26,0:26:69.10:0,69,930	0/0:38,0:38:94.75:0,95,1401	1/1:25,1:25:65.93:784,66,0	0/0:30,0:29:81.19:0,81,1104	1/1:8,24:16:36.12:463,36,0	1/1:4,13:13:27.08:343,27,0	0/0:24,0:24:64.49:0,64,877	0/0:17,0:16:46.95:0,47,642	0/0:30,0:30:88.09:0,88,1199	1/1:8,11:12:28.16:308,28,0	1/1:21,2:20:34:203,34,0	1/1:26,1:23:29.18:182,29,0	1/1:15,8:16:20.01:142,20,0	1/1:15,0:12:26.84:283,27,0	1/1:26,0:17:28.82:225,29,0	1/1:28,12:25:3.47:29,3,0	0/0:22,1:23:28.89:0,29,794	0/0:17,0:17:51.17:0,51,730	0/0:36,0:35:98.18:0,98,1286	1/1:27,0:20:26.35:134,26,0	1/1:9,22:17:45.01:555,45,0	1/1:6,16:14:39.11:490,39,0	1/1:9,15:17:37.28:447,37,0
chr10	17027559	.	G	GTA	9556.04	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=2.251;DP=518;FS=2.072;HRun=0;HaplotypeScore=82.8687;InbreedingCoeff=0.9496;MQ=77.34;MQ0=1;MQRankSum=-3.753;QD=28.96;ReadPosRankSum=3.593;VQSLOD=6.3096;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,44:49:88.30:1839,88,0	1/1:8,0:8:8.71:47,9,0	0/0:18,0:19:43.66:0,44,518	0/0:10,0:10:1.52:0,2,233	1/1:14,0:14:37.68:206,38,0	0/0:15,0:15:45.14:0,45,646	0/0:23,0:25:75.13:0,75,980	1/1:2,18:20:57.08:870,57,0	0/0:14,0:14:39.08:0,39,530	1/1:11,0:11:31.81:176,32,0	1/1:8,0:8:23.18:126,23,0	0/0:19,0:19:57.18:0,57,846	0/0:26,0:26:72.23:0,72,1060	0/0:12,0:12:33.08:0,33,443	1/1:18,0:18:34.77:189,35,0	1/1:2,21:23:42.14:751,42,0	1/1:27,0:27:67.51:414,68,0	1/1:4,30:34:81.06:1377,81,0	1/1:0,15:17:51.14:834,51,0	1/1:1,15:17:39.05:631,39,0	1/1:0,19:21:51.17:916,51,0	0/0:4,0:4:12.04:0,12,183	0/0:12,0:12:36.08:0,36,483	0/0:31,0:32:96.27:0,96,1344	1/1:2,6:8:21.07:376,21,0	1/1:22,0:22:64.15:377,64,0	1/1:27,0:27:61.66:365,62,0	1/1:5,0:5:11.61:63,12,0
chr10	17027560	.	T	TA	8102.36	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=10.131;DP=513;FS=2.068;HRun=0;HaplotypeScore=77.8296;InbreedingCoeff=0.9806;MQ=78.17;MQ0=1;MQRankSum=-3.374;QD=24.93;ReadPosRankSum=3.668;VQSLOD=5.7449;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:48,0:47:71.50:693,72,0	1/1:1,7:8:9.02:125,9,0	0/0:20,0:20:43.14:0,43,484	0/0:10,0:10:18.09:0,18,229	1/1:0,14:14:39.13:542,39,0	0/0:15,0:15:45.13:0,45,588	0/0:25,0:25:75.07:0,75,915	1/1:20,0:20:33.64:380,34,0	0/0:13,0:13:39.08:0,39,490	1/1:0,11:11:32.84:428,33,0	1/1:0,8:8:23.99:308,24,0	0/0:19,0:19:57.18:0,57,775	0/0:25,0:25:75.22:0,75,996	0/0:12,0:12:33.08:0,33,408	1/1:2,15:17:36.11:501,36,0	1/1:22,0:22:41.59:287,42,0	1/1:3,24:27:75.30:1040,75,0	1/1:31,2:33:80.47:623,80,0	1/1:17,0:17:50.68:383,51,0	1/1:17,0:17:38.59:267,39,0	1/1:21,0:21:50.59:352,51,0	0/0:5,0:5:12.04:0,12,167	0/0:12,0:12:36.11:0,36,478	0/0:32,0:32:96.23:0,96,1234	1/1:8,0:8:20.80:144,21,0	1/1:0,22:22:66.17:868,66,0	1/1:1,26:27:69.32:996,69,0	1/1:0,5:5:12.04:167,12,0
chr10	17027632	.	G	GA	309.16	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-0.676;DP=509;FS=14.580;HRun=1;HaplotypeScore=68.1697;InbreedingCoeff=0.9654;MQ=91.69;MQ0=0;MQRankSum=-2.046;QD=34.35;ReadPosRankSum=0.343;VQSLOD=2.0004;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,105,1347	0/0:4,0:4:12.04:0,12,156	0/0:24,0:24:68.95:0,69,848	0/0:20,0:20:49.90:0,50,687	0/0:15,0:15:39.13:0,39,506	0/0:23,0:23:66.18:0,66,828	0/0:20,0:20:60.18:0,60,765	0/0:17,0:17:51.17:0,51,662	0/0:12,0:12:33.11:0,33,427	0/0:9,0:9:24.08:0,24,312	0/0:13,0:13:36.12:0,36,464	0/0:11,0:11:33.11:0,33,428	0/0:14,0:14:42.14:0,42,545	0/0:11,0:11:33.11:0,33,428	0/0:16,0:16:48.15:0,48,610	0/0:22,0:22:63.20:0,63,815	0/0:27,0:27:81.24:0,81,1034	0/0:31,0:30:81.21:0,81,1031	0/0:17,0:17:51.12:0,51,643	0/0:17,0:17:51.17:0,51,662	0/0:29,0:29:75.23:0,75,958	0/0:16,0:16:45.13:0,45,568	0/0:15,0:15:45.15:0,45,582	0/0:35,0:35:99:0,105,1363	1/1:0,8:9:27.09:403,27,0	0/0:20,0:20:57.19:0,57,740	0/0:13,0:13:39.13:0,39,506	0/0:9,0:9:27.09:0,27,350
chr10	17028493	.	CA	C	5604.76	PASS	AB=0.987;AC=49;AF=0.875;AN=56;BaseQRankSum=4.141;DP=544;FS=0.827;HRun=1;HaplotypeScore=156.1034;InbreedingCoeff=-0.1313;MQ=66.41;MQ0=0;MQRankSum=-4.736;QD=10.30;ReadPosRankSum=7.854;VQSLOD=2.4667;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:18,0:18:39.01:89,0,39	1/1:10,0:10:26.03:151,26,0	0/1:10,0:10:29.50:29,0,70	0/1:13,0:13:20.98:21,0,136	0/1:16,0:16:25.28:47,0,25	1/1:14,0:14:32.17:183,32,0	1/1:24,0:24:33.56:304,34,0	1/1:21,0:21:49.32:247,49,0	1/1:15,0:15:32.17:188,32,0	1/1:27,0:27:62.01:340,62,0	1/1:17,1:18:32.43:189,32,0	1/1:29,0:29:68.02:408,68,0	1/1:16,0:16:33.73:187,34,0	1/1:11,0:11:22.89:114,23,0	1/1:22,0:22:57.63:337,58,0	1/1:17,0:17:21.67:234,22,0	1/1:27,0:27:49.96:297,50,0	1/1:15,0:14:31.70:176,32,0	0/1:23,1:24:35.76:208,0,36	0/1:24,0:24:14.15:148,0,14	1/1:19,0:19:12.49:134,12,0	1/1:22,1:23:28.44:167,28,0	1/1:27,0:26:14.04:140,14,0	0/1:18,1:19:0.90:92,0,1	1/1:22,0:22:45.14:254,45,0	1/1:29,0:29:83.64:478,84,0	1/1:20,0:20:24.34:247,24,0	1/1:14,0:14:34.63:193,35,0
chr10	17028581	.	G	GT	485.18	PASS	AB=0.994;AC=24;AF=0.444;AN=54;BaseQRankSum=2.181;DP=326;FS=11.850;HRun=0;HaplotypeScore=349.1873;InbreedingCoeff=-0.1233;MQ=32.91;MQ0=2;MQRankSum=-1.948;QD=2.00;ReadPosRankSum=3.314;VQSLOD=1.0791;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:6.99:0,7,29	0/0:3,0:3:5.67:0,6,20	1/1:3,0:0:2.22:7,2,0	./.	0/0:13,0:12:1.94:0,2,9	1/1:6,1:6:2.56:8,3,0	0/0:10,0:10:6.74:0,7,55	0/1:4,0:3:30.12:30,0,30	0/1:12,0:12:6.25:7,0,6	0/1:11,1:12:19.27:32,0,19	0/1:8,0:8:1.59:2,0,6	0/1:21,0:21:13.05:53,0,13	0/1:21,0:20:15.85:30,0,16	0/1:20,0:20:35.08:89,0,35	0/1:28,0:28:32.76:67,0,33	0/1:23,0:23:18.40:58,0,18	0/1:9,0:9:16.99:87,0,17	1/1:6,0:6:2.46:24,2,0	0/0:4,3:7:11.30:0,11,32	0/0:6,0:6:7.78:0,8,27	0/0:12,1:12:3.31:0,3,22	1/1:6,0:6:1.79:16,2,0	0/0:11,0:9:7.80:0,8,73	0/1:26,0:26:16.21:84,0,16	0/1:24,0:24:23.80:24,0,54	1/1:8,0:6:2.36:9,2,0	1/1:4,0:4:0.89:2,1,0	0/0:9,0:9:14.42:0,14,88
chr10	17032712	.	T	TAC	434.62	PASS	AB=0.828;AC=15;AF=0.326;AN=46;BaseQRankSum=-0.254;DP=421;FS=3.168;HRun=0;HaplotypeScore=73.2700;InbreedingCoeff=0.3009;MQ=61.65;MQ0=8;MQRankSum=-0.906;QD=3.42;ReadPosRankSum=-1.829;VQSLOD=1.8974;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:18,1:19:28.67:35,0,29	1/1:8,3:12:5.98:65,6,0	./.	./.	1/1:9,0:9:2.68:25,3,0	0/0:16,0:18:2.84:0,3,14	0/0:16,0:21:14.02:0,14,76	./.	0/0:11,0:11:5.97:0,6,52	1/1:9,0:9:3.48:45,3,0	0/0:7,0:8:2.84:0,3,14	0/0:7,0:7:2.99:0,3,24	./.	0/0:11,0:12:5.83:0,6,46	0/1:13,6:21:13.38:78,0,13	0/0:13,0:13:0:0,0,0	0/1:19,5:25:55.66:133,0,56	0/0:8,0:9:2.84:0,3,14	0/0:13,0:15:5.85:0,6,47	0/0:8,0:8:8.67:0,9,62	0/0:26,0:24:6.01:0,6,64	0/0:6,0:6:2.99:0,3,24	0/0:9,0:9:2.87:0,3,32	0/0:28,0:29:17.74:0,18,158	./.	1/1:10,0:10:10.23:87,10,0	1/1:8,0:8:5.98:62,6,0	1/1:13,0:13:5.98:46,6,0
chr10	17033512	.	G	GT	10107.84	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-12.759;DP=703;FS=2.964;HRun=1;HaplotypeScore=67.8689;InbreedingCoeff=0.9937;MQ=89.76;MQ0=0;MQRankSum=-8.331;QD=42.47;ReadPosRankSum=2.685;VQSLOD=5.3523;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,39:41:96.33:1533,96,0	0/0:6,0:6:18.06:0,18,251	0/0:25,0:25:69.22:0,69,946	0/0:28,0:28:81.05:0,81,1037	0/0:17,0:17:48.16:0,48,671	0/0:27,0:27:78.25:0,78,1068	0/0:34,0:34:99:0,99,1381	0/0:30,0:30:87.28:0,87,1185	1/1:2,24:26:72.25:1151,72,0	0/0:20,0:20:57.17:0,57,778	0/0:7,0:7:15.05:0,15,210	1/1:2,40:42:99:1909,120,0	1/1:1,34:35:90.31:1439,90,0	1/1:0,17:17:48.16:767,48,0	0/0:27,0:27:81.26:0,81,1115	0/0:24,0:24:72.23:0,72,989	0/0:35,0:35:99:0,105,1447	0/0:34,0:33:99:0,102,1396	0/0:25,0:25:75.06:0,75,988	0/0:13,0:13:39.11:0,39,525	0/0:59,0:59:99:0,166,2286	1/1:0,6:6:15.05:240,15,0	1/1:1,16:17:35.99:575,36,0	1/1:1,37:38:99:1727,108,0	1/1:0,16:16:48.16:767,48,0	0/0:25,0:25:72.23:0,72,989	0/0:17,0:17:51.17:0,51,713	0/0:12,0:12:36.12:0,36,503
chr10	17036121	.	A	AC	20066.09	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-12.862;DP=652;FS=2.488;HRun=1;HaplotypeScore=66.8314;InbreedingCoeff=0.9967;MQ=92.74;MQ0=0;MQRankSum=-5.386;QD=39.81;ReadPosRankSum=7.144;VQSLOD=4.7180;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,35:35:99:1483,99,0	1/1:0,6:6:18.06:269,18,0	0/0:30,0:30:81.23:0,81,1001	0/0:25,0:24:70.57:0,71,815	1/1:3,27:30:69.23:1034,69,0	1/1:1,12:13:36.12:540,36,0	1/1:0,31:31:87.29:1304,87,0	0/0:24,0:24:72.22:0,72,913	1/1:1,24:25:69.23:1034,69,0	1/1:3,22:25:69.19:983,69,0	1/1:0,11:11:21.07:314,21,0	1/1:2,31:33:93.31:1387,93,0	1/1:0,19:19:51.17:764,51,0	1/1:0,33:33:87.29:1303,87,0	1/1:1,28:29:75.20:1124,75,0	1/1:1,24:25:66.22:989,66,0	1/1:1,31:32:84.28:1259,84,0	1/1:0,23:23:66.22:986,66,0	0/0:25,0:25:75.23:0,75,960	0/0:8,0:8:24.08:0,24,312	0/0:36,0:36:99:0,105,1334	1/1:2,20:22:57.19:849,57,0	1/1:1,18:19:45.15:674,45,0	1/1:0,20:20:51.17:764,51,0	1/1:0,19:19:57.19:854,57,0	1/1:1,23:24:69.19:986,69,0	1/1:1,18:20:54.18:807,54,0	1/1:0,10:10:24.08:359,24,0
chr10	17039875	.	CG	C	2871.88	PASS	AB=0.586;AC=17;AF=0.304;AN=56;BaseQRankSum=20.323;DP=783;FS=5.484;HRun=1;HaplotypeScore=149.8583;InbreedingCoeff=0.9450;MQ=80.70;MQ0=0;MQRankSum=-19.531;QD=11.53;ReadPosRankSum=3.666;VQSLOD=2.4182;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,31:46:50.22:457,50,0	0/0:17,0:17:48.12:0,48,735	0/0:28,0:28:70.62:0,71,1101	0/0:25,0:25:60.19:0,60,938	0/0:27,0:27:81.28:0,81,1294	0/0:19,0:19:57.19:0,57,910	0/0:34,0:34:99:0,99,1523	0/0:46,0:46:99:0,135,2126	1/1:2,23:25:68.48:382,68,0	0/0:33,0:33:96.33:0,96,1529	0/0:16,0:16:45.14:0,45,697	1/1:6,34:40:55.57:531,56,0	1/1:4,29:33:90.15:504,90,0	1/1:5,15:20:41.23:235,41,0	0/0:31,0:31:93.30:0,93,1450	0/0:30,0:30:90.27:0,90,1411	0/0:36,0:36:99:0,108,1725	0/0:34,0:33:99:0,102,1605	0/0:16,0:16:48.16:0,48,767	0/0:16,0:16:48.16:0,48,766	0/0:46,0:46:99:0,138,2204	1/1:2,25:27:48.97:341,49,0	1/1:3,19:22:49.30:279,49,0	1/1:6,13:19:29.46:182,29,0	0/1:5,12:17:2.82:171,0,3	0/0:43,0:43:99:0,129,2024	0/0:25,0:25:75.26:0,75,1198	0/0:12,0:12:36.07:0,36,503
chr10	17039876	.	GTCATCC	G	13063.95	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=20.027;DP=777;FS=0.959;HRun=0;HaplotypeScore=190.8813;InbreedingCoeff=0.9999;MQ=79.86;MQ0=0;MQRankSum=-19.922;QD=53.11;ReadPosRankSum=2.838;VQSLOD=4.9842;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:47,0:47:99:2018,99,0	0/0:17,0:17:48.15:0,48,1544	0/0:26,0:26:68.66:0,69,1926	0/0:25,0:25:57.12:0,57,1565	0/0:27,0:27:78.27:0,78,2722	0/0:20,0:20:60.21:0,60,1972	0/0:33,0:33:84.29:0,84,2789	0/0:47,0:47:99:0,126,4000	1/1:25,0:25:72.25:1594,72,0	0/0:33,0:33:81.28:0,81,2743	0/0:15,0:15:45.13:0,45,1364	1/1:40,0:40:99:2374,108,0	1/1:32,0:32:93.32:2036,93,0	1/1:15,4:19:48.16:1043,48,0	0/0:30,0:30:87.30:0,87,2893	0/0:29,0:29:87.30:0,87,3025	0/0:37,0:37:99:0,102,3401	0/0:34,0:33:96.33:0,96,3233	0/0:16,0:16:42.13:0,42,1282	0/0:16,0:16:45.15:0,45,1565	0/0:46,0:46:99:0,132,4392	1/1:27,0:27:72.25:1581,72,0	1/1:21,0:21:42.09:930,42,0	1/1:19,0:19:30.03:647,30,0	1/1:16,0:16:39.13:841,39,0	0/0:43,0:43:99:0,120,3959	0/0:25,0:25:72.25:0,72,2497	0/0:12,0:12:33.11:0,33,989
chr10	17039877	.	TCATCC	T	8497.72	PASS	AB=0.636;AC=17;AF=0.304;AN=56;BaseQRankSum=20.814;DP=799;FS=2.887;HRun=0;HaplotypeScore=196.3006;InbreedingCoeff=0.9248;MQ=78.66;MQ0=0;MQRankSum=-20.303;QD=32.31;ReadPosRankSum=4.109;VQSLOD=4.5282;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:21,31:52:30.45:1269,30,0	0/0:17,0:17:48.16:0,48,1547	0/0:26,0:26:78.12:0,78,2070	0/0:25,0:25:68.82:0,69,1788	0/0:27,0:27:81.28:0,81,2637	0/0:20,0:20:60.21:0,60,1963	0/0:32,0:32:93.32:0,93,2892	0/0:46,0:46:99:0,135,4167	1/1:2,23:25:72.24:1056,72,0	0/0:33,0:33:96.32:0,96,2867	0/0:15,0:15:45.15:0,45,1422	1/1:7,34:41:69.94:1527,70,0	1/1:2,29:31:93.31:1351,93,0	1/1:4,15:19:48.15:660,48,0	0/0:30,0:30:90.31:0,90,2940	0/0:30,0:30:90.31:0,90,2963	0/0:39,0:39:99:0,117,3588	0/0:34,0:33:99:0,102,3229	0/0:17,0:17:51.17:0,51,1472	0/0:17,0:17:51.17:0,51,1599	0/0:48,0:48:99:0,144,4525	1/1:5,25:30:48.11:1017,48,0	1/1:3,19:22:48.04:643,48,0	1/1:9,13:22:33.53:450,34,0	0/1:9,12:21:9.18:524,0,9	0/0:43,0:43:99:0,129,4070	0/0:25,0:25:75.26:0,75,2437	0/0:12,0:12:36.12:0,36,1096
chr10	17044514	.	G	GTC	6542.08	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-10.730;DP=815;FS=7.139;HRun=0;HaplotypeScore=119.0144;InbreedingCoeff=0.9839;MQ=56.89;MQ0=11;MQRankSum=5.754;QD=26.06;ReadPosRankSum=5.356;VQSLOD=5.9922;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,36:40:43.17:739,43,0	0/0:10,0:10:30.09:0,30,384	0/0:26,0:11:27.05:0,27,336	0/0:31,0:11:6.50:0,7,215	0/0:17,0:17:26.69:0,27,327	0/0:37,0:36:95.95:0,96,1273	0/0:32,0:30:60.16:0,60,765	0/0:52,0:51:99:0,126,1594	1/1:2,27:29:51.17:883,51,0	0/0:36,0:36:84.23:0,84,1098	0/0:12,0:11:23.94:0,24,319	1/1:4,22:26:48.16:831,48,0	1/1:6,30:37:60.21:1027,60,0	1/1:4,17:21:32.90:569,33,0	0/0:33,0:33:76.79:0,77,1004	0/0:38,0:38:99:0,108,1404	0/0:31,0:31:72.19:0,72,935	0/0:23,0:23:45.25:0,45,817	0/0:20,0:16:42.12:0,42,539	0/0:28,0:28:69.19:0,69,898	0/0:44,0:44:99:0,111,1428	1/1:3,14:16:23.50:415,23,0	1/1:10,6:16:42.13:679,42,0	1/1:5,32:36:35.22:622,35,0	1/1:2,25:27:45.15:779,45,0	0/0:45,0:45:99:0,123,1593	0/0:30,0:30:69.22:0,69,910	0/0:17,0:17:45.15:0,45,594
chr10	17044614	.	CTCTCTGTCTCTCTG	C	2568.34	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=6.198;DP=727;FS=0.611;HRun=0;HaplotypeScore=277.7163;InbreedingCoeff=0.8664;MQ=55.63;MQ0=13;MQRankSum=-4.087;QD=14.35;ReadPosRankSum=-6.301;VQSLOD=1.0255;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:22,6:26:15.73:349,16,0	0/0:11,0:11:21.07:0,21,1091	0/0:27,0:4:6.02:0,6,132	0/0:48,0:23:21.54:0,22,379	0/0:20,0:19:36.12:0,36,1719	0/0:24,0:23:45.15:0,45,1491	0/0:29,0:25:33.11:0,33,1062	0/0:53,0:53:99:0,102,3457	1/1:8,7:14:6.81:307,7,0	0/0:34,0:34:81.27:0,81,3792	0/0:13,0:13:26.45:0,26,1447	1/1:15,10:24:33.54:1028,34,0	1/1:8,4:11:27.93:624,28,0	1/1:10,5:16:14.69:267,15,0	0/0:33,0:32:75.24:0,75,4020	0/0:37,0:37:53.93:0,54,2389	0/0:48,0:47:95.55:0,96,4938	0/0:23,0:23:53.92:0,54,1745	0/0:31,0:26:57.08:0,57,2368	0/0:19,0:19:51.18:0,51,2384	0/0:32,0:32:72.25:0,72,3326	1/1:3,20:23:2.71:6,3,0	1/1:6,16:21:0.89:2,1,0	1/1:17,3:20:3.05:26,3,0	1/1:14,4:17:8.68:144,9,0	0/0:29,0:29:81.28:0,81,3672	0/0:19,0:19:36.12:0,36,1577	0/0:18,0:18:50.30:0,50,2229
chr10	17044620	.	G	GTC	4149.45	PASS	AB=0.992;AC=23;AF=0.411;AN=56;BaseQRankSum=-4.119;DP=700;FS=6.006;HRun=0;HaplotypeScore=153.8705;InbreedingCoeff=0.6477;MQ=55.03;MQ0=14;MQRankSum=-1.065;QD=13.34;ReadPosRankSum=-0.037;VQSLOD=3.1413;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:29:14.65:192,15,0	0/0:9,0:9:20.83:0,21,275	0/0:22,0:3:6.02:0,6,75	0/1:40,0:19:6.32:6,0,144	0/0:18,0:17:36.12:0,36,478	1/1:1,22:22:45.15:778,45,0	1/1:2,28:26:33.11:572,33,0	0/0:46,0:46:99:0,111,1399	1/1:16,0:15:2.33:77,2,0	0/0:31,0:31:84.26:0,84,1096	0/0:16,0:16:27.09:0,27,359	0/1:21,0:20:12.32:177,0,12	1/1:14,0:13:10.68:173,11,0	1/1:19,0:20:8.07:102,8,0	0/0:33,0:32:75.21:0,75,981	1/1:2,32:34:66.23:1140,66,0	0/0:48,0:47:94.46:0,94,1239	1/1:2,22:24:19.44:848,19,0	0/0:28,0:23:66.09:0,66,822	0/0:19,0:19:51.17:0,51,677	0/0:34,0:34:84.25:0,84,1089	0/0:20,0:20:1.15:0,1,3	0/0:20,0:19:0.42:0,0,1	1/1:20,0:21:2.97:25,3,0	1/1:18,0:16:4.94:46,5,0	0/0:27,0:27:81.27:0,81,1078	0/0:17,0:17:36.12:0,36,478	0/1:18,0:18:13.42:13,0,545
chr10	17044624	.	C	CTG	1925.10	PASS	AB=0.955;AC=17;AF=0.304;AN=56;BaseQRankSum=10.547;DP=714;FS=15.765;HRun=0;HaplotypeScore=167.6794;InbreedingCoeff=0.4207;MQ=55.80;MQ0=16;MQRankSum=3.176;QD=6.46;ReadPosRankSum=1.524;VQSLOD=2.6339;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:26,5:29:17.69:65,0,18	0/0:8,0:8:20.83:0,21,321	0/0:24,0:3:6.02:0,6,91	0/1:42,0:18:18.93:19,0,159	0/0:20,0:19:39.12:0,39,574	1/1:25,0:24:25.06:387,25,0	1/1:29,0:25:33.01:293,33,0	0/0:45,0:45:99:0,123,1804	1/1:14,2:15:9.30:69,9,0	0/0:32,0:32:96.23:0,96,1375	0/0:16,0:16:27.09:0,27,413	0/1:20,1:20:57.62:106,0,58	1/1:13,0:12:5.84:113,6,0	0/1:21,1:22:4.80:37,0,5	0/0:32,0:31:75.24:0,75,1145	1/1:36,0:36:44.06:575,44,0	0/0:49,0:48:94.47:0,94,1423	0/1:24,0:24:7:426,0,7	0/0:32,0:27:75.22:0,75,1079	0/0:19,0:19:54.17:0,54,804	0/0:34,0:34:87.28:0,87,1306	0/0:20,0:20:1.15:0,1,3	0/0:19,0:18:0.42:0,0,1	0/1:18,2:21:0.21:1,0,0	0/0:19,0:17:2.11:0,2,79	0/0:29,0:29:87.27:0,87,1290	0/0:17,0:17:39.12:0,39,574	0/1:18,0:18:6.54:7,0,629
chr10	17044626	.	CTG	C	986.39	PASS	AB=0.979;AC=16;AF=0.286;AN=56;BaseQRankSum=8.154;DP=716;FS=4.116;HRun=0;HaplotypeScore=171.8327;InbreedingCoeff=0.7792;MQ=56.58;MQ0=17;MQRankSum=-0.598;QD=5.36;ReadPosRankSum=-5.500;VQSLOD=0.9619;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:27,4:29:14.77:119,15,0	0/0:8,0:8:20.90:0,21,386	0/0:27,0:3:5.99:0,6,80	0/0:40,0:18:20.85:0,21,272	0/0:19,0:18:36.12:0,36,682	0/0:26,0:25:54.05:0,54,506	0/0:29,0:25:36.05:0,36,344	0/0:43,0:43:99:0,123,2089	1/1:16,1:16:1.44:100,1,0	0/0:31,0:31:93.23:0,93,1646	0/0:15,0:15:26.77:0,27,519	1/1:20,1:20:28.44:230,28,0	1/1:13,1:13:32.78:336,33,0	1/1:15,7:22:26.54:286,27,0	0/0:32,0:31:75.24:0,75,1412	0/0:37,0:36:59.94:0,60,673	0/0:49,0:48:94.39:0,94,1751	0/0:25,0:25:59.05:0,59,550	0/0:31,0:26:77.93:0,78,1307	0/0:21,0:21:60.15:0,60,1037	0/0:34,0:34:87.28:0,87,1617	1/1:20,0:20:0.94:3,1,0	0/1:17,0:16:0:1,0,0	0/1:22,1:23:17.74:19,0,18	1/1:14,5:17:10.68:69,11,0	0/0:29,0:29:87.28:0,87,1630	0/0:17,0:17:36.11:0,36,647	0/0:18,0:18:36.77:0,37,853
chr10	17044628	.	G	GTC	656.82	PASS	AB=0.952;AC=12;AF=0.214;AN=56;BaseQRankSum=10.016;DP=714;FS=11.029;HRun=0;HaplotypeScore=175.1983;InbreedingCoeff=0.0218;MQ=56.45;MQ0=18;MQRankSum=3.275;QD=2.58;ReadPosRankSum=2.391;VQSLOD=2.1796;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:26,5:29:13.11:13,0,36	0/0:8,0:8:17.82:0,18,247	0/0:27,0:4:6.01:0,6,65	0/0:42,0:19:26.29:0,26,242	0/0:18,0:17:33.10:0,33,435	0/1:26,0:25:26.52:27,0,78	0/1:29,0:25:2.74:3,0,51	0/0:39,0:39:99:0,108,1391	0/1:14,2:15:5.63:110,0,6	0/0:30,0:30:87.27:0,87,1162	0/0:17,0:17:27.09:0,27,370	0/1:21,1:21:73.45:129,0,73	1/1:13,1:13:3.92:176,4,0	0/1:20,1:21:1.52:209,0,2	0/0:35,0:34:72.22:0,72,986	0/1:37,0:36:27.07:27,0,59	0/0:49,0:48:91.41:0,91,1212	0/1:25,0:25:51.89:52,0,65	0/0:33,0:28:72.02:0,72,911	0/0:21,0:21:54.14:0,54,706	0/0:33,0:33:84.24:0,84,1116	0/0:21,0:21:1.15:0,1,3	0/0:17,0:16:0.42:0,0,1	0/0:19,2:21:2.78:0,3,23	0/1:16,0:14:10.81:40,0,11	0/0:29,0:29:84.26:0,84,1123	0/0:18,0:18:30.09:0,30,394	0/1:15,0:18:13.80:14,0,560
chr10	17044690	.	GTCTCTGTCTCTC	G	5263.72	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=3.314;DP=754;FS=0.851;HRun=0;HaplotypeScore=274.5593;InbreedingCoeff=0.9054;MQ=52.73;MQ0=19;MQRankSum=-0.133;QD=21.31;ReadPosRankSum=-0.854;VQSLOD=3.6399;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:36:47.12:0,47,1186	1/1:1,10:12:5.27:179,5,0	0/0:12,0:4:8.90:0,9,61	0/0:16,0:4:3.47:0,3,29	1/1:4,32:35:24.95:398,25,0	0/0:25,0:24:56.45:0,56,1336	0/0:24,0:24:46.80:0,47,932	0/0:44,0:41:99:0,102,1118	0/0:21,0:21:40.21:0,40,1064	1/1:3,32:35:97.03:1448,97,0	1/1:3,19:21:9.78:161,10,0	0/0:23,0:23:59.75:0,60,1960	0/0:17,0:16:17.96:0,18,497	0/0:26,0:26:55.96:0,56,2222	1/1:1,26:27:15.05:330,15,0	0/0:28,0:26:56.82:0,57,1460	1/1:4,36:40:2.87:101,3,0	0/0:23,0:25:46.05:0,46,1306	0/0:24,0:18:42.98:0,43,1105	0/0:32,0:30:78.14:0,78,2198	0/0:38,0:37:84.11:0,84,2374	0/0:23,0:23:43.40:0,43,1117	0/0:27,0:26:41.69:0,42,802	0/0:39,0:37:51.53:0,52,1634	0/0:26,0:26:55.85:0,56,1687	1/1:1,37:38:99:1603,104,0	1/1:3,26:29:35.99:885,36,0	1/1:7,0:7:20.89:158,21,0
chr10	17044696	.	G	GTC	4771.41	PASS	AB=0.699;AC=14;AF=0.250;AN=56;BaseQRankSum=-10.264;DP=758;FS=5.244;HRun=0;HaplotypeScore=170.9252;InbreedingCoeff=0.4111;MQ=52.64;MQ0=21;MQRankSum=0.749;QD=19.72;ReadPosRankSum=0.971;VQSLOD=5.0015;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:23,13:35:56.59:503,0,57	0/0:11,0:11:5.73:0,6,39	0/0:17,0:3:9.02:0,9,97	0/0:17,0:3:2.77:0,3,21	0/0:33,0:33:17.63:0,18,159	0/0:13,0:24:36.54:0,37,175	0/0:8,0:27:0.84:0,1,108	0/0:49,0:46:53.99:0,54,661	1/1:11,8:19:0.03:471,0,0	0/0:34,0:34:57.98:0,58,509	0/0:21,0:20:5.09:0,5,40	1/1:13,10:24:12.92:605,13,0	1/1:6,11:16:9.03:140,9,0	1/1:15,13:28:19.26:707,19,0	0/0:27,0:27:5.85:0,6,49	0/0:14,0:25:20.70:0,21,147	0/0:37,0:37:2.99:0,3,23	0/0:13,0:25:26.53:0,27,177	0/0:25,0:19:32.87:0,33,346	0/0:31,0:30:63.17:0,63,714	0/0:32,0:33:46.70:0,47,590	0/1:19,7:26:31.63:415,0,32	1/1:21,8:28:45.03:638,45,0	0/1:24,14:36:84.95:598,0,85	0/1:4,20:25:10.78:694,0,11	0/0:37,0:38:70.41:0,70,696	0/0:26,0:26:24.52:0,25,177	0/0:7,0:7:12.04:0,12,139
chr10	17044825	.	AACACACACACACACACAC	A	1590.25	PASS	AB=0.934;AC=30;AF=0.556;AN=54;BaseQRankSum=2.263;DP=511;FS=3.620;HRun=0;HaplotypeScore=208.5782;InbreedingCoeff=0.2174;MQ=60.21;MQ0=30;MQRankSum=2.346;QD=5.03;ReadPosRankSum=0.795;VQSLOD=2.5197;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:34,0:34:8.99:74,9,0	0/1:4,0:3:6.52:7,0,14	./.	0/0:24,0:14:0:0,0,0	0/1:11,0:11:17.09:17,0,55	1/1:17,0:16:0.47:1,0,0	1/1:21,0:20:12.04:195,12,0	0/0:24,0:23:2.60:0,3,10	1/1:3,0:3:6.02:173,6,0	0/0:29,0:27:19.99:0,20,330	0/1:14,0:13:16:16,0,39	1/1:15,0:14:9.48:125,9,0	1/1:15,0:14:9.48:109,9,0	1/1:13,1:15:3.01:126,3,0	0/0:15,0:13:2.98:0,3,22	1/1:20,0:18:5.99:49,6,0	0/1:27,0:26:24.69:75,0,25	0/1:20,6:26:99:133,0,479	0/0:17,0:16:9:0,9,314	0/0:20,0:18:12.04:0,12,688	0/0:23,0:21:24.08:0,24,1417	1/1:16,0:15:6.02:100,6,0	1/1:8,0:8:6:51,6,0	1/1:32,1:29:20.31:334,20,0	0/1:14,0:14:12.93:91,0,13	0/0:22,0:20:14.41:0,14,226	0/1:8,0:12:36.15:80,0,36	0/1:8,0:8:4.38:4,0,72
chr10	17045831	.	T	TC	6041.83	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=17.166;DP=655;FS=39.272;HRun=6;HaplotypeScore=92.4091;InbreedingCoeff=0.9992;MQ=86.53;MQ0=0;MQRankSum=-2.681;QD=24.26;ReadPosRankSum=2.698;VQSLOD=2.5119;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,43:51:84.26:1035,84,0	0/0:15,0:15:42.09:0,42,427	0/0:28,0:28:54.09:0,54,615	0/0:16,0:16:33.03:0,33,322	0/0:17,0:17:45.10:0,45,459	0/0:27,0:27:69.15:0,69,704	0/0:22,0:22:57.11:0,57,574	0/0:24,0:24:63.14:0,63,642	1/1:2,17:19:48.15:591,48,0	0/0:30,0:30:81.18:0,81,825	0/0:15,0:15:39.08:0,39,396	1/1:3,28:31:55.89:834,56,0	1/1:3,24:27:60.19:740,60,0	1/1:4,29:33:69.22:851,69,0	0/0:28,0:28:84.19:0,84,856	0/0:24,0:24:66.14:0,66,673	0/0:18,0:18:51.12:0,51,520	0/0:17,0:17:48.11:0,48,490	0/0:18,0:18:39.09:0,39,398	0/0:20,0:20:57.11:0,57,570	0/0:28,0:28:78.17:0,78,795	1/1:5,16:21:22.36:393,22,0	1/1:2,11:14:26.96:295,27,0	1/1:3,28:31:75.24:925,75,0	1/1:7,15:22:33.06:377,33,0	0/0:19,0:19:54.12:0,54,550	0/0:28,0:28:69.15:0,69,703	0/0:12,0:12:36.08:0,36,366
chr10	17047411	.	C	CCA	2158.58	PASS	AB=0.905;AC=19;AF=0.339;AN=56;BaseQRankSum=4.025;DP=533;FS=4.461;HRun=0;HaplotypeScore=77.8592;InbreedingCoeff=0.7696;MQ=65.96;MQ0=18;MQRankSum=-0.718;QD=11.48;ReadPosRankSum=1.364;VQSLOD=3.2755;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,16:22:10.96:100,11,0	0/0:6,0:5:12.04:0,12,158	0/0:35,0:16:48.08:0,48,598	0/0:41,0:21:59.53:0,60,742	0/0:6,0:6:6.02:0,6,81	0/0:22,0:25:28.59:0,29,484	0/0:24,0:28:63.18:0,63,802	0/0:20,0:20:51.13:0,51,665	1/1:1,8:12:12.03:144,12,0	0/0:13,0:12:20.79:0,21,283	0/0:5,0:5:15.05:0,15,202	1/1:22,1:29:57.18:858,57,0	1/1:9,1:9:18.06:247,18,0	1/1:4,13:20:5.39:44,5,0	0/0:16,0:15:29.86:0,30,361	0/0:20,0:22:47.33:0,47,634	0/0:30,0:31:72.01:0,72,891	0/1:17,0:18:13.01:13,0,438	0/0:5,0:5:12.04:0,12,162	0/0:4,0:4:8.83:0,9,122	0/0:51,0:48:99:0,104,1302	1/1:17,1:17:33.05:488,33,0	1/1:4,0:4:2.98:22,3,0	1/1:3,26:34:5.28:62,5,0	1/1:16,0:16:24.08:376,24,0	0/0:17,0:17:38.73:0,39,494	0/0:15,0:14:7.14:0,7,332	0/0:3,0:4:2.42:0,2,113
chr10	17049814	.	G	GGT	1932.30	PASS	AB=0.817;AC=16;AF=0.296;AN=54;BaseQRankSum=2.021;DP=390;FS=13.759;HRun=0;HaplotypeScore=121.1569;InbreedingCoeff=0.6497;MQ=58.92;MQ0=0;MQRankSum=-3.923;QD=14.98;ReadPosRankSum=1.027;VQSLOD=2.5985;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:22.73:0,23,119	1/1:7,0:7:3.01:47,3,0	0/0:11,0:7:8.41:0,8,69	0/0:14,0:9:13.89:0,14,95	1/1:14,0:14:2.92:17,3,0	0/0:16,0:16:29.63:0,30,204	0/0:17,0:17:8.99:0,9,75	0/0:15,0:15:14.97:0,15,187	0/0:11,0:11:11.37:0,11,56	1/1:18,0:18:36.10:512,36,0	1/1:9,0:9:1.85:173,2,0	0/0:15,0:15:5.76:0,6,30	./.	0/0:14,0:15:20.33:0,20,125	1/1:16,0:16:35.99:487,36,0	0/0:13,0:13:8.93:0,9,66	0/1:8,11:19:10.55:44,0,11	0/0:17,0:17:14.94:0,15,117	0/0:11,0:11:18:0,18,173	0/0:8,0:8:11.93:0,12,102	0/0:24,0:24:37.55:0,38,362	0/0:13,0:14:12.72:0,13,60	0/0:8,0:8:8.94:0,9,64	0/0:12,0:12:8.59:0,9,45	0/0:11,0:11:14.14:0,14,76	1/1:18,0:18:42.09:589,42,0	0/1:20,0:20:5.99:86,0,6	1/1:8,0:8:12.01:152,12,0
chr10	17049822	.	T	TGT	1883.54	PASS	AB=0.821;AC=14;AF=0.259;AN=54;BaseQRankSum=2.301;DP=360;FS=13.787;HRun=0;HaplotypeScore=122.1123;InbreedingCoeff=0.6462;MQ=55.60;MQ0=0;MQRankSum=-3.942;QD=18.11;ReadPosRankSum=2.150;VQSLOD=3.0224;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:22.60:0,23,119	1/1:5,0:5:3.01:47,3,0	0/0:11,0:7:8.41:0,8,69	0/0:11,0:6:13.89:0,14,95	0/1:14,0:14:0.88:1,0,6	0/0:13,0:13:29.63:0,30,204	0/0:17,0:17:8.99:0,9,75	0/0:13,0:13:14.72:0,15,187	0/0:11,0:11:10.10:0,10,54	1/1:18,0:18:36.10:512,36,0	1/1:9,0:9:1.85:173,2,0	0/0:15,0:15:5.18:0,5,29	./.	0/0:13,0:13:20.33:0,20,126	1/1:15,0:15:35.98:487,36,0	0/0:13,0:13:8.93:0,9,66	0/0:20,0:20:1.20:0,1,15	0/0:18,0:18:14.94:0,15,117	0/0:9,0:9:18:0,18,173	0/0:8,0:8:7.99:0,8,96	0/0:22,0:22:38.44:0,38,364	0/0:12,0:12:10.29:0,10,46	0/0:6,0:6:8.94:0,9,64	0/0:10,0:10:8.59:0,9,45	0/0:11,0:11:11.93:0,12,66	1/1:17,0:17:42.09:589,42,0	0/1:8,9:18:5.99:87,0,6	1/1:8,0:8:12.01:153,12,0
chr10	17049825	.	GT	G	1296.06	PASS	AB=1.000;AC=22;AF=0.393;AN=56;BaseQRankSum=-0.357;DP=330;FS=5.491;HRun=1;HaplotypeScore=102.4421;InbreedingCoeff=0.5811;MQ=56.33;MQ0=0;MQRankSum=-1.669;QD=9.46;ReadPosRankSum=0.516;VQSLOD=1.2078;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,11:13:30.04:370,30,0	0/0:3,0:3:2.32:0,2,9	0/0:11,0:7:12.25:0,12,129	0/0:11,0:6:1.36:0,1,87	0/0:13,0:13:3:0,3,25	0/1:12,0:12:16.75:61,0,17	0/1:17,0:17:6.15:6,0,17	0/0:12,0:12:27.07:0,27,350	1/1:1,6:7:17.31:182,17,0	0/0:17,0:17:39.15:0,39,249	0/0:9,0:9:17.70:0,18,119	1/1:1,12:13:8.39:89,8,0	1/1:2,4:6:3.37:9,3,0	1/1:7,5:12:27.54:239,28,0	0/0:15,0:15:35.13:0,35,249	0/0:13,0:13:3.02:0,3,60	0/0:18,0:18:13.99:0,14,91	0/1:18,0:18:3.88:4,0,70	0/0:7,1:8:18.97:0,19,206	0/1:6,0:6:7.90:8,0,108	0/0:22,0:22:20.27:0,20,389	1/1:4,5:9:10.71:150,11,0	1/1:3,0:3:8.97:72,9,0	1/1:5,5:10:17.93:182,18,0	1/1:9,2:11:11.88:116,12,0	0/0:16,0:16:43.71:0,44,271	0/0:17,0:17:24.15:0,24,166	0/0:8,0:8:23.77:0,24,185
chr10	17049826	.	TG	T	661.02	PASS	AB=1.000;AC=21;AF=0.404;AN=52;BaseQRankSum=-2.245;DP=341;FS=2.721;HRun=9;HaplotypeScore=133.9293;InbreedingCoeff=0.6412;MQ=53.52;MQ0=0;MQRankSum=-0.315;QD=4.53;ReadPosRankSum=0.343;VQSLOD=0.6809;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:14:26.07:164,26,0	0/0:3,0:3:1.55:0,2,4	0/0:10,0:6:0.79:0,1,22	0/0:11,0:6:2.99:0,3,23	./.	1/1:5,7:12:23.69:202,24,0	1/1:1,16:17:6:55,6,0	0/0:14,0:14:30.55:0,31,335	1/1:7,0:7:14.56:93,15,0	0/0:11,0:17:15.30:0,15,42	0/0:9,0:9:8.57:0,9,32	1/1:17,0:17:8.16:42,8,0	0/0:10,0:10:5.35:0,5,38	1/1:14,0:14:2.27:36,2,0	0/0:14,0:14:20.91:0,21,77	1/1:2,10:12:3:27,3,0	0/0:18,0:18:7.23:0,7,41	1/1:4,14:18:9:82,9,0	0/0:7,0:8:6.02:0,6,69	0/0:6,0:6:9.92:0,10,81	0/0:21,0:21:8.27:0,8,180	1/1:10,0:10:7.52:73,8,0	./.	1/1:11,0:12:8.61:59,9,0	0/1:13,0:13:5.50:6,0,16	0/0:16,0:16:15.85:0,16,42	0/0:17,0:17:16.30:0,16,73	0/0:5,0:5:6.37:0,6,33
chr10	17049827	.	G	GT	944.19	PASS	AB=0.895;AC=13;AF=0.241;AN=54;BaseQRankSum=2.655;DP=338;FS=13.245;HRun=1;HaplotypeScore=145.3395;InbreedingCoeff=0.6239;MQ=53.25;MQ0=0;MQRankSum=-2.766;QD=11.80;ReadPosRankSum=1.967;VQSLOD=1.0850;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:2.45:0,2,100	1/1:2,1:3:2.98:22,3,0	0/0:10,0:6:10.13:0,10,74	0/0:10,0:6:14.66:0,15,110	./.	0/0:12,0:12:10.78:0,11,88	0/0:20,0:20:3.80:0,4,39	0/0:14,0:14:30.55:0,31,368	0/0:7,0:7:3.53:0,4,56	1/1:12,5:17:28.25:279,28,0	1/1:2,7:9:16.94:118,17,0	0/0:17,0:17:4.37:0,4,37	0/0:10,0:10:4.84:0,5,28	0/0:14,0:14:21.82:0,22,140	1/1:4,9:13:35.73:256,36,0	0/0:12,0:12:8.55:0,9,55	0/0:17,0:17:4.79:0,5,22	0/0:16,0:16:13.74:0,14,73	0/0:8,0:8:18:0,18,180	0/0:6,0:6:12.88:0,13,108	0/0:19,0:19:32.43:0,32,372	0/0:11,0:11:8.88:0,9,53	0/0:3,0:3:8.94:0,9,66	0/0:12,0:12:14.59:0,15,85	0/0:13,0:13:14.15:0,14,84	1/1:5,11:16:35.53:317,36,0	0/1:15,2:17:26.19:26,0,29	1/1:2,3:5:4.97:94,5,0
chr10	17049828	.	G	GT	466.23	PASS	AB=0.840;AC=13;AF=0.232;AN=56;BaseQRankSum=4.344;DP=335;FS=36.169;HRun=0;HaplotypeScore=146.9141;InbreedingCoeff=0.4981;MQ=49.50;MQ0=0;MQRankSum=-5.275;QD=4.81;ReadPosRankSum=2.811;VQSLOD=1.8143;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:5.19:0,5,103	1/1:2,1:3:2.94:18,3,0	0/0:8,0:4:4.49:0,4,61	0/0:8,0:4:11.91:0,12,103	0/0:11,2:13:2.68:0,3,11	0/0:13,0:13:29.52:0,30,190	0/0:20,0:20:8.50:0,8,62	0/0:14,0:14:24.40:0,24,383	0/0:7,0:7:3.53:0,4,55	1/1:12,5:17:23.23:178,23,0	1/1:2,7:9:11.62:57,12,0	0/1:16,0:16:0.77:1,0,53	0/0:10,0:10:5.77:0,6,36	0/0:15,0:15:21.97:0,22,153	1/1:4,9:13:12.92:138,13,0	0/0:12,0:12:8.91:0,9,65	0/0:17,0:17:4.32:0,4,24	0/0:16,0:16:11.81:0,12,77	0/0:8,0:8:17.91:0,18,169	0/0:6,0:6:12.88:0,13,108	0/0:19,0:19:32.42:0,32,372	0/0:11,0:11:15.49:0,15,79	0/0:2,0:2:2.99:0,3,25	0/0:12,0:12:8.76:0,9,55	0/0:13,0:13:14.37:0,14,110	1/1:6,11:17:17.82:190,18,0	0/1:15,2:17:15.04:15,0,69	0/1:2,3:5:10.43:31,0,10
chr10	17050228	.	GC	G	59.73	PASS	AB=0.769;AC=3;AF=0.75;AN=4;BaseQRankSum=0.747;DP=22;FS=0.000;HRun=1;HaplotypeScore=78.6205;MQ=171.97;MQ0=11;MQRankSum=-0.747;QD=2.99;ReadPosRankSum=0.747;VQSLOD=-0.3699;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	./.	1/1:9,1:6:11.35:104,11,0	0/1:7,3:5:3.07:21,0,3	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.
chr10	17050577	.	T	TC	2451.07	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-11.738;DP=556;FS=0.000;HRun=7;HaplotypeScore=70.0846;InbreedingCoeff=0.9492;MQ=77.82;MQ0=0;MQRankSum=0.951;QD=26.93;ReadPosRankSum=-0.662;VQSLOD=3.9244;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:70.91:0,71,683	0/0:2,0:2:3:0,3,29	0/0:15,0:15:35.99:0,36,327	0/0:21,0:21:21.20:0,21,276	0/0:11,0:11:24.03:0,24,231	1/1:1,17:18:51.16:616,51,0	1/1:6,29:35:75.23:906,75,0	0/0:15,0:15:33.04:0,33,317	0/0:16,0:16:41.90:0,42,391	0/0:24,0:24:69.11:0,69,665	0/0:13,0:13:24.03:0,24,231	0/0:19,0:19:36.04:0,36,348	0/0:31,0:31:87.13:0,87,839	0/0:16,0:16:36.05:0,36,346	0/0:25,0:24:66.10:0,66,637	1/1:2,15:17:33.99:400,34,0	0/0:30,0:30:78.11:0,78,752	1/1:1,20:21:57.17:688,57,0	0/0:16,0:17:38.09:0,38,354	0/0:19,0:19:42.07:0,42,405	0/0:45,0:45:99:0,126,1205	0/0:11,0:11:24.03:0,24,230	0/0:8,0:8:24.03:0,24,227	0/0:30,0:30:78.12:0,78,753	0/0:13,0:13:30.05:0,30,290	0/0:19,0:19:33.03:0,33,317	0/0:20,0:20:48.07:0,48,463	0/0:11,0:11:30.05:0,30,289
chr10	17051167	.	G	GAA	2917.11	PASS	AB=0.644;AC=24;AF=0.429;AN=56;BaseQRankSum=4.400;DP=592;FS=31.338;HRun=11;HaplotypeScore=84.4150;InbreedingCoeff=0.7748;MQ=48.86;MQ0=65;MQRankSum=-0.186;QD=11.58;ReadPosRankSum=0.042;VQSLOD=-0.0820;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:47:76.09:0,76,803	1/1:8,0:6:11.67:108,12,0	0/0:48,0:9:6.91:0,7,102	0/0:39,0:7:13.80:0,14,113	1/1:25,0:20:35.88:305,36,0	1/1:8,8:19:14.33:135,14,0	0/1:7,13:18:8.82:180,0,9	0/0:32,0:29:19.08:0,19,301	0/0:16,0:14:23.94:0,24,232	1/1:25,0:21:41.95:371,42,0	1/1:20,0:18:32.95:341,33,0	0/0:18,0:18:17.86:0,18,169	0/0:9,0:7:5.97:0,6,58	0/0:13,0:11:12.02:0,12,116	1/1:24,1:23:30.29:278,30,0	0/1:6,5:10:9.12:185,0,9	1/1:30,0:26:53.81:513,54,0	1/1:7,8:13:14.92:168,15,0	0/0:16,0:14:17.51:0,18,150	0/0:14,0:14:1.74:0,2,172	0/0:11,0:11:14.94:0,15,139	0/0:19,0:18:23.95:0,24,226	0/0:15,0:12:23.99:0,24,230	0/0:22,0:19:35.27:0,35,316	0/0:20,0:19:13.55:0,14,239	1/1:22,0:18:29.94:248,30,0	1/1:19,0:16:27.64:237,28,0	1/1:11,0:8:6.01:61,6,0
chr10	17051174	.	A	AAC	4474.50	PASS	AB=0.950;AC=22;AF=0.393;AN=56;BaseQRankSum=-5.529;DP=603;FS=0.000;HRun=0;HaplotypeScore=86.0832;InbreedingCoeff=0.6844;MQ=56.85;MQ0=52;MQRankSum=1.606;QD=17.28;ReadPosRankSum=5.389;VQSLOD=4.6294;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,116,1412	1/1:2,9:9:12.04:183,12,0	0/0:47,0:13:25.98:0,26,223	0/0:41,0:9:20.04:0,20,241	1/1:7,16:19:35.78:530,36,0	0/1:18,0:18:19.07:19,0,52	0/1:24,0:21:38.08:38,0,81	0/0:34,0:32:62.90:0,63,714	0/0:15,0:15:39.52:0,40,474	1/1:6,19:22:37.49:720,37,0	1/1:9,13:21:16.87:521,17,0	0/0:15,0:15:32.90:0,33,342	0/0:8,0:7:14.99:0,15,159	0/0:13,0:12:15.04:0,15,199	1/1:14,13:26:17:457,17,0	0/1:10,0:10:53.16:55,0,53	1/1:7,21:25:48.89:840,49,0	1/1:16,0:14:8.08:54,8,0	0/0:22,0:20:53.34:0,53,519	0/0:15,0:15:41.86:0,42,427	0/0:15,0:15:35.42:0,35,379	0/0:14,0:13:35.03:0,35,418	0/0:18,0:15:38.76:0,39,451	0/0:21,0:18:41.58:0,42,516	0/0:23,0:22:55.26:0,55,585	1/1:5,15:16:36.55:569,37,0	1/1:8,11:17:11.81:386,12,0	0/1:9,3:9:7.57:102,0,8
chr10	17053515	.	C	CTT	2897.69	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-10.657;DP=529;FS=2.890;HRun=9;HaplotypeScore=97.4411;InbreedingCoeff=0.9543;MQ=77.58;MQ0=0;MQRankSum=2.224;QD=29.87;ReadPosRankSum=1.324;VQSLOD=3.8872;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:47:99:0,123,1298	0/0:6,0:6:12.01:0,12,128	0/0:14,0:14:29.41:0,29,279	0/0:13,0:13:11.53:0,12,125	0/0:16,0:16:14.93:0,15,159	1/1:5,21:26:36.12:554,36,0	1/1:1,24:27:71.73:1071,72,0	0/0:20,0:20:51.12:0,51,543	0/0:16,0:16:45.07:0,45,461	0/0:13,0:13:30.05:0,30,319	0/0:13,0:13:14.93:0,15,159	0/0:24,0:24:66.13:0,66,693	0/0:24,0:24:66.15:0,66,694	0/0:16,0:16:42.10:0,42,447	0/0:15,0:15:45.11:0,45,479	1/1:2,10:14:23.53:307,24,0	0/0:19,0:19:36.02:0,36,382	1/1:3,25:30:77.24:1126,77,0	0/0:20,0:20:45.08:0,45,473	0/0:16,0:17:48.10:0,48,511	0/0:22,0:22:60.13:0,60,630	0/0:15,0:15:34.81:0,35,381	0/0:10,0:10:8.97:0,9,96	0/0:24,0:24:63.12:0,63,660	0/0:13,0:13:39.10:0,39,415	0/0:24,0:24:51.08:0,51,543	0/0:22,0:22:57.13:0,57,606	0/0:9,0:9:17.88:0,18,174
chr10	17053545	.	GAGCGTTTAC	G	9250.76	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=10.793;DP=524;FS=6.630;HRun=0;HaplotypeScore=154.6706;InbreedingCoeff=0.9831;MQ=76.95;MQ0=0;MQRankSum=-14.314;QD=67.03;ReadPosRankSum=2.771;VQSLOD=4.3270;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,117,5293	1/1:0,3:3:9.03:279,9,0	0/0:17,0:17:48.16:0,48,2272	0/0:10,0:10:26.39:0,26,1143	1/1:1,14:15:18.06:558,18,0	0/0:22,0:22:54.19:0,54,2546	0/0:32,0:32:87.30:0,87,4085	0/0:22,0:22:60.17:0,60,2473	0/0:19,0:19:54.15:0,54,2378	1/1:3,7:10:21.07:651,21,0	1/1:2,15:17:39.13:1209,39,0	0/0:19,0:19:54.13:0,54,2132	0/0:21,0:21:63.20:0,63,2940	0/0:16,0:16:48.12:0,48,2223	1/1:0,17:17:48.16:1482,48,0	0/0:15,0:15:33.58:0,34,1431	1/1:5,14:19:30.10:929,30,0	0/0:25,0:25:75.18:0,75,3259	0/0:17,0:17:51.15:0,51,2296	0/0:18,0:18:54.19:0,54,2534	0/0:28,0:28:81.28:0,81,3839	0/0:13,0:13:36.12:0,36,1657	0/0:7,0:7:21.06:0,21,906	0/0:29,0:29:84.29:0,84,4012	0/0:15,0:15:39.12:0,39,1791	1/1:5,22:27:60.16:1723,60,0	1/1:0,24:24:66.23:2047,66,0	1/1:0,6:6:12.04:372,12,0
chr10	17054244	.	G	GGTGTGTGTGT	6457.97	PASS	AB=0.921;AC=44;AF=0.786;AN=56;BaseQRankSum=-4.448;DP=684;FS=1.572;HRun=0;HaplotypeScore=240.6811;InbreedingCoeff=0.0774;MQ=59.50;MQ0=10;MQRankSum=-1.386;QD=10.78;ReadPosRankSum=-2.783;VQSLOD=3.4696;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:32,0:31:3.47:26,3,0	1/1:5,0:12:9.03:231,9,0	0/0:29,0:12:3.01:0,3,31	0/0:39,0:17:3:0,3,30	1/1:14,0:20:3.01:48,3,0	1/1:19,0:19:3.20:62,3,0	0/1:25,0:25:32.75:33,0,48	0/1:29,0:31:19.39:19,0,267	1/1:29,0:29:18.06:473,18,0	1/1:17,0:24:45.11:1011,45,0	1/1:11,0:12:6.02:175,6,0	1/1:22,12:39:3.48:150,3,0	1/1:8,0:11:3.01:131,3,0	1/1:27,0:28:6.41:249,6,0	1/1:14,0:19:21:431,21,0	0/1:19,0:19:10.80:11,0,18	1/1:30,0:34:33.11:693,33,0	0/1:32,0:31:39.24:65,0,39	0/0:14,0:17:2.15:0,2,42	0/1:8,0:13:8.08:8,0,101	0/1:41,0:45:92.65:93,0,155	1/1:23,0:23:9.03:255,9,0	1/1:23,0:23:2.64:69,3,0	1/1:28,0:28:11.22:337,11,0	1/1:22,0:22:21.03:558,21,0	1/1:20,0:25:39.13:877,39,0	1/1:7,0:17:13.60:366,14,0	1/1:6,0:5:6.02:86,6,0
chr10	17054251	.	G	GTGTA	3834.70	PASS	AB=1.000;AC=24;AF=0.429;AN=56;BaseQRankSum=4.837;DP=636;FS=12.218;HRun=0;HaplotypeScore=131.5876;InbreedingCoeff=-0.1604;MQ=53.13;MQ0=12;MQRankSum=-0.082;QD=8.56;ReadPosRankSum=7.670;VQSLOD=0.4774;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:22:20.72:0,21,149	0/1:13,0:12:69.78:85,0,70	0/0:34,0:13:35.88:0,36,362	0/0:38,0:15:35.85:0,36,343	0/0:18,0:17:19.49:0,19,144	1/1:4,14:20:0.49:359,0,0	1/1:3,25:28:27.78:899,28,0	0/0:26,0:25:44.84:0,45,457	0/1:26,0:26:5.51:6,0,193	0/1:21,0:21:90.14:90,0,150	0/1:10,0:8:40.61:41,0,57	0/1:37,0:36:14.80:15,0,120	0/1:10,0:10:20.45:20,0,81	0/1:25,0:24:3.37:3,0,145	0/1:17,0:17:70.59:71,0,93	1/1:1,20:23:26.76:723,27,0	0/1:33,0:32:99:176,0,197	1/1:10,28:37:36.45:1095,36,0	0/0:18,0:17:35.72:0,36,297	0/0:11,0:11:12.97:0,13,145	0/1:41,0:39:6.27:6,0,408	0/1:20,0:20:2.79:3,0,138	0/0:20,0:20:2:0,2,149	0/1:27,0:27:10.90:11,0,55	0/1:16,0:16:21.04:21,0,118	0/1:20,0:19:99:107,0,112	0/1:17,0:17:74.99:75,0,104	0/1:6,0:5:13.27:29,0,13
chr10	17054629	.	CA	C	3778.58	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=11.059;DP=832;FS=9.837;HRun=2;HaplotypeScore=77.9334;InbreedingCoeff=0.9998;MQ=81.97;MQ0=0;MQRankSum=-2.256;QD=34.67;ReadPosRankSum=2.344;VQSLOD=3.6299;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:59,0:59:99:0,178,2649	0/0:10,0:10:30.10:0,30,449	0/0:26,0:26:78.25:0,78,1124	0/0:18,0:18:41.86:0,42,590	0/0:29,0:29:87.27:0,87,1263	1/1:0,28:28:66.21:857,66,0	1/1:0,22:22:60.20:779,60,0	0/0:31,0:31:90.30:0,90,1348	0/0:37,0:37:99:0,108,1619	0/0:28,0:28:81.26:0,81,1180	0/0:24,0:24:72.24:0,72,1079	0/0:40,0:40:99:0,120,1799	0/0:35,0:35:99:0,102,1528	0/0:30,0:30:90.28:0,90,1294	0/0:46,0:46:99:0,138,2065	1/1:0,41:41:99:1597,123,0	0/0:32,0:32:93.25:0,93,1307	1/1:0,18:18:42.14:545,42,0	0/0:32,0:32:96.33:0,96,1437	0/0:20,0:20:60.20:0,60,896	0/0:66,0:66:99:0,196,2901	0/0:19,0:19:57.19:0,57,854	0/0:13,0:13:36.08:0,36,515	0/0:27,0:27:81.27:0,81,1214	0/0:16,0:16:48.16:0,48,718	0/0:42,0:42:99:0,123,1844	0/0:29,0:29:87.29:0,87,1301	0/0:14,0:14:42.14:0,42,630
chr10	17056108	.	GGGT	G	3809.76	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=13.321;DP=622;FS=12.641;HRun=0;HaplotypeScore=97.6248;InbreedingCoeff=0.9973;MQ=73.03;MQ0=0;MQRankSum=-2.830;QD=34.02;ReadPosRankSum=2.576;VQSLOD=3.9995;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:84.38:0,84,1935	0/0:9,0:9:27.09:0,27,518	0/0:17,0:17:41.96:0,42,755	0/0:13,0:13:33.07:0,33,549	0/0:24,0:24:69.18:0,69,1255	1/1:3,22:25:66.22:997,66,0	1/1:8,23:31:57.19:847,57,0	0/0:19,0:19:51.13:0,51,818	0/0:18,0:18:51.14:0,51,995	0/0:19,0:19:57.19:0,57,1140	0/0:13,0:13:36.10:0,36,704	0/0:28,0:28:64.30:0,64,1595	0/0:19,0:19:57.17:0,57,1055	0/0:21,0:21:63.22:0,63,1289	0/0:22,0:22:63.21:0,63,1252	1/1:2,23:25:57.19:868,57,0	0/0:39,0:39:99:0,108,2163	1/1:5,26:31:72.24:1097,72,0	0/0:14,0:14:37.33:0,37,643	0/0:18,0:18:47.22:0,47,947	0/0:41,0:41:99:0,116,2209	0/0:17,0:17:36.09:0,36,834	0/0:8,0:8:21.05:0,21,396	0/0:30,0:30:90.25:0,90,1793	0/0:25,0:25:66.21:0,66,1369	0/0:27,0:27:67.10:0,67,1320	0/0:24,0:24:69.19:0,69,1323	0/0:7,0:7:21.07:0,21,441
chr10	17056575	.	TC	T	6941.42	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=5.272;DP=662;FS=6.662;HRun=2;HaplotypeScore=76.0901;InbreedingCoeff=0.9995;MQ=92.75;MQ0=1;MQRankSum=-7.859;QD=33.21;ReadPosRankSum=4.248;VQSLOD=4.8421;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,32:33:84.27:1089,84,0	0/0:11,0:11:32.98:0,33,462	0/0:28,0:28:71.14:0,71,999	0/0:33,0:33:85.01:0,85,1140	0/0:13,0:13:39.10:0,39,559	0/0:20,0:20:60.19:0,60,877	0/0:21,0:21:60.17:0,60,857	0/0:35,0:35:99:0,102,1433	1/1:0,16:16:45.15:583,45,0	0/0:25,0:25:75.18:0,75,1010	0/0:11,0:11:33.11:0,33,493	1/1:1,23:24:66.21:856,66,0	1/1:0,16:16:45.15:583,45,0	1/1:1,23:24:72.20:915,72,0	0/0:14,0:14:42.13:0,42,609	0/0:16,0:16:45.14:0,45,656	0/0:37,0:37:99:0,108,1587	0/0:40,0:40:99:0,120,1749	0/0:21,0:21:57.18:0,57,832	0/0:27,0:27:78.16:0,78,1084	0/0:54,0:53:99:0,156,2275	1/1:2,12:14:33.11:428,33,0	1/1:0,18:18:51.17:659,51,0	1/1:0,32:32:72.23:934,72,0	1/1:1,31:32:69.22:895,69,0	0/0:13,0:13:39.12:0,39,565	0/0:25,0:25:75.25:0,75,1117	0/0:9,0:9:24.08:0,24,359
chr10	17056687	.	G	GTGT	12538.82	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-14.326;DP=617;FS=2.330;HRun=0;HaplotypeScore=88.5388;InbreedingCoeff=0.9992;MQ=84.05;MQ0=0;MQRankSum=-3.904;QD=65.99;ReadPosRankSum=2.748;VQSLOD=6.1799;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,31:35:96.33:2315,96,0	0/0:13,0:13:39.12:0,39,684	0/0:17,0:16:39.05:0,39,686	0/0:28,0:28:74.03:0,74,1211	0/0:11,0:11:33.11:0,33,605	0/0:23,0:23:66.23:0,66,1208	0/0:28,0:28:84.27:0,84,1520	0/0:19,0:19:57.17:0,57,974	1/1:1,21:22:63.22:1550,63,0	0/0:24,0:24:69.24:0,69,1284	0/0:14,0:14:39.13:0,39,726	1/1:1,22:23:66.23:1604,66,0	1/1:2,11:13:39.13:883,39,0	1/1:1,24:25:72.25:1772,72,0	0/0:21,0:21:63.20:0,63,1143	0/0:25,0:25:75.24:0,75,1329	0/0:41,0:41:99:0,123,2284	0/0:25,0:25:75.16:0,75,1231	0/0:20,0:20:60.19:0,60,1064	0/0:15,0:15:42.14:0,42,758	0/0:47,0:47:99:0,138,2552	1/1:2,11:13:30.10:735,30,0	1/1:2,7:9:21.07:503,21,0	1/1:3,31:34:87.30:2143,87,0	1/1:0,14:16:42.14:1034,42,0	0/0:22,0:22:66.20:0,66,1143	0/0:22,0:22:66.23:0,66,1216	0/0:12,0:12:36.12:0,36,671
chr10	17056999	.	CA	C	8294.13	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=11.669;DP=709;FS=1.326;HRun=1;HaplotypeScore=74.8797;InbreedingCoeff=0.9994;MQ=88.94;MQ0=0;MQRankSum=-2.995;QD=38.58;ReadPosRankSum=4.406;VQSLOD=5.4358;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,120,1833	1/1:0,22:22:57.19:793,57,0	0/0:27,0:27:81.25:0,81,1215	0/0:30,1:30:77.99:0,78,1152	1/1:0,17:17:51.17:712,51,0	0/0:17,0:17:51.17:0,51,815	0/0:27,0:27:81.28:0,81,1290	0/0:33,0:33:99:0,99,1521	0/0:21,1:22:21.35:0,21,917	1/1:0,30:30:87.22:1182,87,0	1/1:0,13:13:33.11:460,33,0	0/0:36,0:36:99:0,108,1660	0/0:29,0:29:87.28:0,87,1366	0/0:19,0:19:57.17:0,57,865	1/1:0,34:34:90.30:1257,90,0	0/0:34,0:34:99:0,102,1631	1/1:0,34:34:93.31:1298,93,0	0/0:36,0:36:99:0,108,1672	0/0:20,0:20:60.19:0,60,917	0/0:13,0:13:39.13:0,39,623	0/0:35,0:35:99:0,102,1627	0/0:17,0:17:48.14:0,48,741	0/0:18,0:18:51.16:0,51,785	0/0:21,0:21:63.21:0,63,1001	0/0:19,0:19:57.17:0,57,885	1/1:0,25:25:75.25:1046,75,0	1/1:0,18:18:51.17:709,51,0	1/1:0,22:22:60.20:838,60,0
chr10	17058036	.	AGT	A	12073.69	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=8.467;DP=467;FS=1.223;HRun=0;HaplotypeScore=62.6794;InbreedingCoeff=0.9907;MQ=85.73;MQ0=2;MQRankSum=-4.085;QD=38.57;ReadPosRankSum=6.195;VQSLOD=6.9357;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,23:23:60.20:883,60,0	1/1:0,6:6:18.06:265,18,0	0/0:22,0:22:54.17:0,54,947	0/0:27,0:24:63.21:0,63,1105	1/1:0,13:13:36.12:530,36,0	1/1:0,18:18:48.16:706,48,0	1/1:1,14:15:33.11:486,33,0	0/0:30,0:30:87.29:0,87,1596	1/1:0,14:14:36.12:529,36,0	1/1:0,16:16:48.16:707,48,0	1/1:0,5:5:15.05:221,15,0	1/1:0,11:11:30.07:441,30,0	1/1:1,13:14:30.10:442,30,0	1/1:0,7:7:21.07:309,21,0	1/1:1,15:15:39.13:574,39,0	1/1:1,12:13:36.12:529,36,0	1/1:1,20:21:57.19:839,57,0	1/1:2,18:20:39.11:553,39,0	0/0:22,0:22:63.22:0,63,1163	0/0:15,0:15:36.11:0,36,643	0/0:38,0:38:99:0,114,2069	1/1:0,13:13:33.11:486,33,0	1/1:0,5:5:15.05:221,15,0	1/1:1,22:23:59.88:882,60,0	1/1:0,12:12:36.12:530,36,0	1/1:2,19:20:57.19:836,57,0	1/1:1,12:13:36.12:529,36,0	1/1:0,14:14:39.13:578,39,0
chr10	17058189	.	AGTTTTTTTTTTT	A	2167.30	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=2.345;DP=459;FS=0.636;HRun=0;HaplotypeScore=182.5219;InbreedingCoeff=0.7901;MQ=74.00;MQ0=2;MQRankSum=-5.535;QD=29.69;ReadPosRankSum=3.151;VQSLOD=2.4265;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:27.08:0,27,546	0/0:7,0:7:8.98:0,9,181	0/0:26,0:16:12.28:0,12,322	0/0:16,0:11:15:0,15,247	0/0:13,0:13:9.77:0,10,731	1/1:19,4:23:38.92:925,39,0	1/1:16,0:16:21.07:458,21,0	0/0:30,0:30:66.20:0,66,3094	0/0:18,0:18:42.94:0,43,1044	0/0:19,0:19:6.82:0,7,741	0/0:10,0:10:26.92:0,27,656	0/0:14,0:14:31.65:0,32,628	0/0:8,0:8:12.84:0,13,395	0/0:9,0:9:21.07:0,21,458	0/0:14,0:13:33.11:0,33,963	1/1:10,1:11:9.71:416,10,0	0/0:14,0:14:33.09:0,33,1040	1/1:15,1:16:21.07:493,21,0	0/0:30,0:30:63.18:0,63,2882	0/0:17,0:17:39.11:0,39,1992	0/0:13,0:13:36.12:0,36,1741	0/0:17,0:17:34.39:0,34,648	0/0:18,0:18:43.41:0,43,766	0/0:24,0:24:48.16:0,48,984	0/0:20,0:20:54.17:0,54,1083	0/0:19,0:19:41.32:0,41,1021	0/0:12,0:12:26.30:0,26,690	0/1:7,0:7:35.62:36,0,166
chr10	17058190	.	GTT	G	3600.24	PASS	AB=1.000;AC=27;AF=0.482;AN=56;BaseQRankSum=10.170;DP=463;FS=8.953;HRun=11;HaplotypeScore=97.5048;InbreedingCoeff=0.4697;MQ=72.86;MQ0=3;MQRankSum=-5.437;QD=13.69;ReadPosRankSum=7.629;VQSLOD=1.0654;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,10:15:30.01:297,30,0	0/0:10,0:9:0.74:0,1,2	0/0:27,0:15:8.98:0,9,126	0/0:17,0:11:16.26:0,16,103	0/1:14,0:14:4.27:4,0,30	0/1:23,0:23:5.61:86,0,6	0/1:16,0:16:15.05:53,0,15	0/0:30,0:30:72.19:0,72,1016	1/1:6,12:19:50.77:512,51,0	0/0:19,0:19:1.72:0,2,93	0/1:10,0:10:1.09:1,0,1	1/1:3,10:13:33.06:336,33,0	1/1:4,4:8:21.05:222,21,0	1/1:0,8:8:21.05:218,21,0	0/0:14,0:13:3.85:0,4,28	1/1:11,0:12:16.33:67,16,0	0/1:13,0:13:13.43:13,0,19	0/1:16,0:16:18.63:53,0,19	0/0:29,0:30:68.17:0,68,907	0/0:17,0:18:47.47:0,47,594	0/0:15,0:15:42:0,42,559	1/1:4,13:17:29.81:303,30,0	1/1:2,16:18:41.94:416,42,0	1/1:1,22:23:45.10:467,45,0	1/1:6,13:19:54.02:547,54,0	0/1:19,0:19:7.17:7,0,20	0/0:12,0:12:3.38:0,3,8	0/0:8,0:8:4.34:0,4,46
chr10	17058191	.	TTTTTTTTTTTG	T	2791.32	PASS	AB=1.000;AC=10;AF=0.179;AN=56;BaseQRankSum=-0.034;DP=472;FS=3.678;HRun=0;HaplotypeScore=176.0774;InbreedingCoeff=0.7254;MQ=71.54;MQ0=3;MQRankSum=-4.994;QD=28.78;ReadPosRankSum=3.071;VQSLOD=3.2442;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:27.54:0,28,433	0/0:10,0:9:11.98:0,12,216	0/0:27,0:15:19.69:0,20,392	0/0:18,0:12:18.68:0,19,350	0/0:14,0:14:11.93:0,12,725	1/1:7,16:23:39.13:1086,39,0	1/1:2,14:16:21.07:662,21,0	0/0:31,0:31:72.20:0,72,3140	0/0:19,0:19:46.03:0,46,880	0/1:19,0:19:34.45:34,0,584	0/0:11,0:11:25.82:0,26,631	0/0:13,0:13:13.84:0,14,471	0/0:8,0:8:12.93:0,13,315	0/0:8,0:8:21.07:0,21,366	0/0:15,0:14:36.10:0,36,860	1/1:5,7:12:19.82:507,20,0	0/0:13,0:13:32.94:0,33,885	1/1:5,11:16:21.07:646,21,0	0/0:31,0:31:66.16:0,66,2726	0/0:18,0:18:42.10:0,42,1962	0/0:15,0:15:42.13:0,42,1864	0/0:17,0:17:22.02:0,22,483	0/0:19,0:19:33.09:0,33,681	0/0:23,0:23:48.16:0,48,779	0/0:19,0:19:54.06:0,54,846	0/0:19,0:19:27.48:0,27,803	0/0:11,0:11:16.09:0,16,560	0/1:11,0:11:23.64:24,0,555
chr10	17058198	.	TTTTG	T	7260.50	PASS	AB=1.000;AC=43;AF=0.768;AN=56;BaseQRankSum=6.312;DP=497;FS=11.795;HRun=0;HaplotypeScore=107.4592;InbreedingCoeff=0.8542;MQ=65.37;MQ0=5;MQRankSum=-3.304;QD=20.86;ReadPosRankSum=3.034;VQSLOD=4.0705;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:18:29.45:352,29,0	1/1:9,0:8:7.88:59,8,0	0/0:29,0:13:0.54:0,1,152	0/0:20,0:11:14.84:0,15,127	1/1:16,1:17:15.81:280,16,0	1/1:23,0:23:39.08:468,39,0	1/1:16,0:16:21.07:271,21,0	0/0:35,0:35:83.73:0,84,1261	1/1:19,0:19:47.66:579,48,0	1/1:22,0:22:41.48:345,41,0	1/1:12,0:12:26.01:215,26,0	1/1:11,0:11:32.79:420,33,0	1/1:9,0:9:24.52:198,25,0	1/1:10,0:10:23.43:242,23,0	1/1:19,1:19:32.92:300,33,0	1/1:11,0:11:20.76:251,21,0	1/1:15,0:15:15.28:193,15,0	1/1:14,0:14:21.07:271,21,0	0/0:27,0:26:66.05:0,66,1004	0/0:19,0:19:41.97:0,42,707	0/0:19,0:19:44.47:0,44,729	1/1:14,1:15:21.22:373,21,0	1/1:18,0:18:25.32:492,25,0	1/1:24,0:24:50.52:615,51,0	1/1:18,1:19:52.08:572,52,0	1/1:17,1:18:46.45:355,46,0	1/1:12,1:13:28.17:247,28,0	0/1:15,0:14:2.95:161,0,3
chr10	17058199	.	TTTG	T	6642.12	PASS	AB=1.000;AC=45;AF=0.804;AN=56;BaseQRankSum=6.214;DP=499;FS=7.915;HRun=0;HaplotypeScore=103.0586;InbreedingCoeff=0.8991;MQ=65.38;MQ0=5;MQRankSum=-3.259;QD=17.48;ReadPosRankSum=2.151;VQSLOD=4.3173;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:17:29.35:242,29,0	1/1:1,8:8:11.74:74,12,0	0/1:29,0:12:1.35:1,0,105	0/0:21,0:12:5.28:0,5,109	1/1:17,0:17:38.40:328,38,0	1/1:23,0:23:38.99:388,39,0	1/1:16,0:16:21.05:224,21,0	0/0:35,0:35:84.15:0,84,1033	1/1:19,0:19:49.13:409,49,0	1/1:22,2:24:52.86:413,53,0	1/1:12,1:13:37.86:292,38,0	1/1:11,0:11:32.78:296,33,0	1/1:9,0:9:24.45:144,24,0	1/1:10,0:10:23.41:174,23,0	1/1:20,0:19:48.15:422,48,0	1/1:11,0:11:20.83:211,21,0	1/1:15,0:15:37.84:326,38,0	1/1:14,0:14:21.05:223,21,0	0/0:26,0:25:60.45:0,60,812	0/0:18,0:18:41.93:0,42,568	0/0:19,0:19:41.94:0,42,591	1/1:15,0:15:22.43:265,22,0	1/1:19,0:19:31.13:355,31,0	1/1:24,0:24:50.39:423,50,0	1/1:18,0:18:51.98:408,52,0	1/1:2,15:17:47.92:454,48,0	1/1:13,0:13:37.88:281,38,0	1/1:16,1:16:33.11:286,33,0
chr10	17058200	.	TTG	T	6133.36	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=5.730;DP=500;FS=6.214;HRun=0;HaplotypeScore=97.9112;InbreedingCoeff=0.8929;MQ=65.29;MQ0=5;MQRankSum=-2.010;QD=17.33;ReadPosRankSum=1.958;VQSLOD=4.4681;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:16:29.32:189,29,0	1/1:9,0:8:11.83:77,12,0	0/0:28,0:12:0.21:0,0,80	0/0:20,0:12:19.90:0,20,121	1/1:18,0:18:47.75:381,48,0	1/1:23,0:23:38.79:311,39,0	1/1:17,0:17:1.41:154,1,0	0/0:36,0:36:52.21:0,52,793	1/1:21,0:21:54.14:344,54,0	1/1:5,18:23:53.69:451,54,0	1/1:13,1:14:41.71:330,42,0	1/1:12,0:12:35.36:250,35,0	1/1:9,0:9:24.24:117,24,0	1/1:10,0:10:23.22:141,23,0	1/1:20,0:19:53.34:438,53,0	1/1:11,0:11:20.85:170,21,0	1/1:14,1:15:44.34:379,44,0	1/1:13,0:13:20.97:176,21,0	0/0:24,0:23:41.49:0,41,632	0/0:18,0:18:34.57:0,35,454	0/0:18,0:18:31.57:0,32,456	1/1:16,0:16:26.09:221,26,0	1/1:19,0:19:32.64:285,33,0	1/1:24,0:24:49.91:331,50,0	1/1:18,0:18:51.59:329,52,0	1/1:17,0:17:47.93:415,48,0	1/1:13,0:13:38.64:302,39,0	1/1:15,1:15:41.32:341,41,0
chr10	17058201	.	TG	T	5390.76	PASS	AB=0.983;AC=44;AF=0.786;AN=56;BaseQRankSum=5.369;DP=495;FS=4.625;HRun=1;HaplotypeScore=95.5326;InbreedingCoeff=0.8038;MQ=64.53;MQ0=5;MQRankSum=-3.014;QD=14.30;ReadPosRankSum=1.994;VQSLOD=4.5399;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:15:27.67:137,28,0	1/1:8,1:8:11.86:79,12,0	0/1:28,1:12:4.71:5,0,56	0/0:20,0:11:18.10:0,18,96	1/1:15,2:17:47.16:393,47,0	1/1:21,0:21:38.20:235,38,0	0/1:16,0:16:11.36:103,0,11	0/0:36,0:36:35.93:0,36,598	1/1:21,0:21:52.79:259,53,0	1/1:21,0:21:53.84:438,54,0	1/1:13,1:14:41.72:327,42,0	1/1:12,0:12:34.30:191,34,0	1/1:9,0:9:23.18:91,23,0	1/1:10,0:10:22.29:108,22,0	1/1:19,1:19:53.85:458,54,0	1/1:12,0:12:9.49:116,9,0	1/1:15,0:15:44.96:385,45,0	1/1:14,0:14:20.62:129,21,0	0/0:25,0:24:36.85:0,37,522	0/0:18,0:18:31.35:0,31,338	0/0:19,0:19:22.95:0,23,379	1/1:16,0:16:25.81:176,26,0	1/1:19,0:19:32.42:214,32,0	1/1:24,0:24:47.56:239,48,0	1/1:18,0:18:49.74:250,50,0	1/1:16,0:16:47.91:396,48,0	1/1:13,0:13:38.81:310,39,0	1/1:16,0:15:41.94:354,42,0
chr10	17058202	.	GTT	G	3018.27	PASS	AB=1.000;AC=27;AF=0.482;AN=56;BaseQRankSum=9.381;DP=505;FS=9.287;HRun=12;HaplotypeScore=108.0871;InbreedingCoeff=0.4137;MQ=64.87;MQ0=5;MQRankSum=-4.763;QD=10.70;ReadPosRankSum=8.856;VQSLOD=0.6263;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:1,14:15:29.96:287,30,0	0/0:9,0:8:1.25:0,1,3	0/0:31,0:14:21.09:0,21,179	0/0:20,0:11:23.32:0,23,194	0/1:16,0:16:2.97:3,0,20	0/1:23,0:23:10.43:107,0,10	0/1:20,0:20:59.24:59,0,69	0/0:33,0:36:63.18:0,63,843	1/1:7,14:21:50.96:497,51,0	0/1:21,0:21:7.28:7,0,19	0/0:15,0:15:3.70:0,4,28	1/1:2,10:12:30.03:291,30,0	1/1:3,5:8:18:181,18,0	1/1:4,6:10:18:179,18,0	0/0:20,0:19:6.83:0,7,38	0/1:13,0:13:18.78:55,0,19	0/1:15,0:15:13.01:13,0,21	0/1:16,0:16:39.66:62,0,40	0/0:25,0:24:49.69:0,50,660	0/0:18,0:18:36.59:0,37,512	0/0:18,1:19:20.54:0,21,592	1/1:7,8:15:29.42:269,29,0	1/1:7,12:19:38.77:369,39,0	1/1:9,15:24:48.07:475,48,0	1/1:7,11:18:35.88:342,36,0	1/1:16,0:16:2.88:11,3,0	0/0:14,0:14:5.51:0,6,31	0/0:15,0:14:0.68:0,1,37
chr10	17058347	.	C	CCA	4122.22	PASS	AB=0.556;AC=7;AF=0.125;AN=56;BaseQRankSum=-0.535;DP=545;FS=6.698;HRun=0;HaplotypeScore=65.9058;InbreedingCoeff=0.8510;MQ=85.03;MQ0=0;MQRankSum=-4.091;QD=43.85;ReadPosRankSum=0.747;VQSLOD=5.1777;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:90.30:0,90,1259	0/0:6,0:6:15.05:0,15,210	0/0:26,0:26:72.18:0,72,963	0/0:11,0:11:24.08:0,24,336	0/0:12,0:12:36.11:0,36,485	1/1:1,22:23:54.19:971,54,0	1/1:1,26:27:78.27:1403,78,0	0/0:31,0:31:81.27:0,81,1134	0/0:21,0:21:60.20:0,60,833	0/0:16,0:16:48.15:0,48,652	0/0:12,0:12:33.11:0,33,459	0/0:11,0:11:30.10:0,30,420	0/0:12,0:12:33.09:0,33,443	0/0:13,0:13:39.09:0,39,521	0/0:17,0:17:45.15:0,45,625	0/1:3,12:15:8.86:507,0,9	0/0:42,0:42:99:0,111,1537	1/1:3,26:29:69.24:1242,69,0	0/0:28,0:27:72.22:0,72,981	0/0:12,0:12:33.11:0,33,462	0/0:33,0:33:87.29:0,87,1217	0/0:9,0:9:21.07:0,21,294	0/0:15,0:15:39.13:0,39,546	0/0:24,0:24:69.23:0,69,966	0/0:17,0:17:51.17:0,51,714	0/0:27,0:27:75.25:0,75,1050	0/0:13,0:13:39.13:0,39,541	0/0:12,0:12:36.12:0,36,504
chr10	17058574	.	AGCCAGGCTT	A	3056.06	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=9.381;DP=521;FS=2.187;HRun=0;HaplotypeScore=144.4586;InbreedingCoeff=0.9870;MQ=78.50;MQ0=0;MQRankSum=-9.519;QD=59.92;ReadPosRankSum=0.165;VQSLOD=3.7471;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,105,4690	0/0:10,0:10:27.07:0,27,1010	0/0:9,0:9:12.04:0,12,388	0/0:22,0:22:50.21:0,50,1798	0/0:10,0:10:24.08:0,24,1085	1/1:2,13:15:30.10:850,30,0	1/1:2,12:14:27.09:756,27,0	0/0:18,0:18:51.16:0,51,1817	0/0:31,0:31:90.30:0,90,4116	0/0:13,0:13:36.12:0,36,1496	0/0:18,0:18:48.16:0,48,2160	0/0:27,0:27:72.25:0,72,3318	0/0:12,0:12:33.11:0,33,1474	0/0:24,0:24:60.21:0,60,2869	0/0:19,0:19:51.18:0,51,2342	1/1:0,9:9:27.09:805,27,0	0/0:38,0:38:99:0,108,5156	1/1:4,9:13:27.09:805,27,0	0/0:26,0:26:78.27:0,78,3349	0/0:8,0:8:21.07:0,21,952	0/0:47,0:47:99:0,138,6255	0/0:9,0:9:24.08:0,24,1052	0/0:13,0:13:30.10:0,30,1254	0/0:25,0:25:69.24:0,69,3175	0/0:14,0:14:39.13:0,39,1695	0/0:12,0:12:30.10:0,30,1436	0/0:18,0:18:42.14:0,42,1987	0/0:9,0:8:24.08:0,24,1049
chr10	17059332	.	ATGG	A	10349.57	PASS	AB=0.905;AC=37;AF=0.661;AN=56;BaseQRankSum=12.978;DP=648;FS=4.437;HRun=0;HaplotypeScore=123.7989;InbreedingCoeff=0.9223;MQ=72.03;MQ0=0;MQRankSum=-1.620;QD=24.29;ReadPosRankSum=4.476;VQSLOD=4.8651;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:23,21:44:63.21:893,63,0	1/1:6,7:13:24.08:340,24,0	0/0:23,0:21:27.04:0,27,380	0/0:27,0:25:17.36:0,17,425	1/1:5,13:18:33.08:468,33,0	0/0:19,0:19:39.13:0,39,784	0/0:28,0:28:60.21:0,60,1211	0/0:23,0:23:18.06:0,18,363	1/1:8,13:21:36.12:510,36,0	1/1:9,9:18:33.07:428,33,0	1/1:6,6:12:15.05:213,15,0	1/1:11,25:36:78.26:1106,78,0	1/1:7,15:22:39.13:553,39,0	1/1:13,27:40:87.29:1234,87,0	1/1:6,17:23:48:680,48,0	0/1:17,2:19:6.27:6,0,625	1/1:10,12:22:33.11:468,33,0	0/0:21,0:21:39.10:0,39,748	0/0:22,0:22:30.99:0,31,604	0/0:11,0:11:12.04:0,12,242	0/0:48,0:48:90.31:0,90,1798	1/1:9,10:19:33.11:468,33,0	1/1:5,4:9:15.02:213,15,0	1/1:14,16:30:39.08:529,39,0	1/1:6,9:15:21.07:298,21,0	1/1:11,18:29:63.20:878,63,0	1/1:6,15:21:42.14:596,42,0	1/1:4,11:15:33.11:468,33,0
chr10	17060940	.	T	TG	22272.81	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-7.976;DP=700;FS=0.000;HRun=1;HaplotypeScore=75.1678;InbreedingCoeff=0.9998;MQ=83.15;MQ0=0;MQRankSum=-5.472;QD=39.77;ReadPosRankSum=6.284;VQSLOD=4.7952;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,48:48:99:1978,132,0	1/1:2,16:18:48.16:712,48,0	0/0:23,0:23:66.19:0,66,839	0/0:18,0:19:33.42:0,33,515	1/1:0,26:26:72.24:1078,72,0	1/1:1,23:24:60.20:899,60,0	1/1:1,29:30:78.26:1169,78,0	0/0:25,0:25:75.22:0,75,944	1/1:1,20:21:57.19:854,57,0	1/1:1,23:24:66.21:967,66,0	1/1:0,15:15:36.12:540,36,0	1/1:2,31:33:87.29:1304,87,0	1/1:1,30:31:84.28:1258,84,0	1/1:1,30:31:84.28:1259,84,0	1/1:0,29:29:77.29:1130,77,0	1/1:0,22:22:54.18:809,54,0	1/1:0,26:26:69.23:1034,69,0	1/1:2,33:35:87.08:1304,87,0	0/0:18,0:18:54.18:0,54,701	0/0:17,0:17:48.16:0,48,622	0/0:38,0:38:99:0,111,1410	1/1:2,27:29:75.25:1124,75,0	1/1:0,19:19:51.17:764,51,0	1/1:1,14:15:36.12:540,36,0	1/1:0,28:28:78.26:1169,78,0	1/1:0,28:28:84.28:1256,84,0	1/1:1,16:17:45.15:674,45,0	1/1:0,11:11:30.10:449,30,0
chr10	17061150	.	A	ACT	7256.72	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=15.932;DP=710;FS=1.562;HRun=0;HaplotypeScore=94.4544;InbreedingCoeff=0.9968;MQ=85.14;MQ0=0;MQRankSum=-6.489;QD=46.52;ReadPosRankSum=3.238;VQSLOD=6.2887;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,144,2294	1/1:0,6:6:15.05:265,15,0	0/0:23,0:23:68.04:0,68,1043	0/0:23,0:23:62.47:0,62,857	1/1:0,13:13:36.12:642,36,0	0/0:18,0:18:54.18:0,54,879	0/0:33,0:33:99:0,99,1592	0/0:31,0:31:87.29:0,87,1419	0/0:16,0:16:45.15:0,45,728	1/1:1,15:16:48.14:861,48,0	1/1:2,16:18:42.14:758,42,0	0/0:30,0:30:90.27:0,90,1396	0/0:29,0:29:87.29:0,87,1395	0/0:30,0:30:87.30:0,87,1409	1/1:1,23:23:57.15:999,57,0	0/0:27,0:27:75.25:0,75,1201	1/1:0,25:25:63.13:1108,63,0	0/0:35,0:35:99:0,102,1555	0/0:24,0:24:72.22:0,72,1104	0/0:23,0:23:69.24:0,69,1125	0/0:68,0:68:99:0,202,3265	0/0:30,0:30:90.29:0,90,1424	0/0:13,0:13:36.12:0,36,585	0/0:28,0:28:84.29:0,84,1370	0/0:22,0:22:66.21:0,66,1052	1/1:0,21:21:63.22:1153,63,0	1/1:0,22:23:60.21:1091,60,0	1/1:0,10:10:21.07:379,21,0
chr10	17064653	.	GAA	G	1633.45	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-6.751;DP=320;FS=5.559;HRun=2;HaplotypeScore=65.4028;InbreedingCoeff=0.9349;MQ=71.74;MQ0=0;MQRankSum=-4.638;QD=37.12;ReadPosRankSum=1.043;VQSLOD=3.6564;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:69.17:0,69,777	0/0:5,0:5:12.92:0,13,152	0/0:9,0:9:19.62:0,20,353	0/0:12,0:12:26.52:0,27,486	0/0:4,0:4:6.02:0,6,66	1/1:0,7:7:18.06:293,18,0	1/1:0,11:11:30.10:487,30,0	0/0:12,0:12:36.12:0,36,729	0/0:18,0:18:48.14:0,48,561	0/0:13,0:13:36.10:0,36,408	0/0:4,0:4:12.04:0,12,143	0/0:19,0:19:54.13:0,54,628	0/0:13,0:13:39.11:0,39,459	0/0:9,0:9:27.02:0,27,307	0/0:19,0:19:57.17:0,57,665	1/1:0,8:8:24.08:389,24,0	0/0:13,0:13:26.99:0,27,279	1/1:0,18:18:39.13:624,39,0	0/0:7,0:7:18.06:0,18,356	0/0:8,0:8:18.06:0,18,364	0/0:17,0:17:48.07:0,48,890	0/0:10,0:10:30:0,30,329	0/0:7,0:7:20.79:0,21,211	0/0:13,0:13:15.04:0,15,169	0/0:7,0:7:18.05:0,18,214	0/0:8,0:8:24.07:0,24,276	0/0:18,0:18:48.13:0,48,536	0/0:5,0:5:15.04:0,15,168
chr10	17064771	.	C	CT	3797.08	PASS	AB=0.892;AC=54;AF=0.964;AN=56;BaseQRankSum=-0.248;DP=465;FS=0.830;HRun=1;HaplotypeScore=158.6340;InbreedingCoeff=0.0278;MQ=69.72;MQ0=0;MQRankSum=-0.722;QD=8.17;ReadPosRankSum=0.987;VQSLOD=0.8902;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:25,1:26:34.43:176,34,0	1/1:13,1:14:21.35:183,21,0	0/1:9,1:10:31.24:31,0,120	0/1:12,2:14:10.02:10,0,203	1/1:10,1:11:10.89:83,11,0	1/1:19,0:19:25.11:117,25,0	1/1:22,0:22:20.86:123,21,0	1/1:13,2:15:26.42:215,26,0	1/1:17,0:17:19.81:100,20,0	1/1:21,0:21:47.07:280,47,0	1/1:9,2:11:3.52:51,4,0	1/1:19,0:19:15.67:105,16,0	1/1:13,0:13:9.92:94,10,0	1/1:20,0:20:17.06:103,17,0	1/1:16,1:17:17.85:140,18,0	1/1:18,1:19:25.51:166,26,0	1/1:14,0:14:27.72:125,28,0	1/1:14,0:14:25.63:127,26,0	1/1:13,2:15:34.58:245,35,0	1/1:18,0:18:26.62:121,27,0	1/1:28,0:28:38.87:268,39,0	1/1:18,0:18:25.88:157,26,0	1/1:10,0:10:3.33:11,3,0	1/1:35,0:35:54.19:275,54,0	1/1:13,0:13:18.61:106,19,0	1/1:18,0:18:40.86:303,41,0	1/1:8,0:8:9.17:40,9,0	1/1:6,0:6:10.68:40,11,0
chr10	17065304	.	CACCACCCATCT	C	4060.79	PASS	AB=0.906;AC=16;AF=0.286;AN=56;BaseQRankSum=8.543;DP=488;FS=2.868;HRun=0;HaplotypeScore=172.1792;InbreedingCoeff=0.7745;MQ=83.03;MQ0=0;MQRankSum=-9.742;QD=42.30;ReadPosRankSum=-0.029;VQSLOD=3.3854;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:14,0:13:87.10:191,0,87	0/0:11,0:11:27.07:0,27,1125	0/0:20,0:20:44.64:0,45,1635	0/0:22,0:20:48.16:0,48,1983	0/0:17,0:17:42.14:0,42,2231	0/0:17,0:17:45.15:0,45,1883	0/0:29,0:29:37.25:0,37,1904	0/0:25,0:25:56.24:0,56,2795	1/1:12,0:12:18.06:599,18,0	0/0:25,0:25:57.18:0,57,2686	0/0:17,0:17:27.09:0,27,1411	1/1:8,1:9:12.04:385,12,0	1/1:8,2:10:12.04:402,12,0	1/1:11,3:15:27.09:900,27,0	0/0:26,0:26:45.63:0,46,2200	0/0:14,0:13:30.10:0,30,1214	0/0:23,0:23:36.12:0,36,1793	0/0:30,0:29:42.55:0,43,2820	0/0:26,0:26:57.17:0,57,2668	0/0:9,0:9:18.06:0,18,968	0/0:28,0:28:48.16:0,48,2239	1/1:6,1:6:6.02:202,6,0	1/1:6,1:7:9.03:295,9,0	0/1:10,2:13:67.86:682,0,68	1/1:8,1:9:12.04:404,12,0	0/0:29,0:29:78.27:0,78,3777	0/0:16,0:16:39.13:0,39,1985	0/0:8,0:8:24.08:0,24,1239
chr10	17065309	.	CCCATCTACCA	C	2334.50	PASS	AB=0.926;AC=12;AF=0.214;AN=56;BaseQRankSum=10.062;DP=476;FS=4.698;HRun=0;HaplotypeScore=165.1585;InbreedingCoeff=0.3229;MQ=83.66;MQ0=0;MQRankSum=-9.473;QD=28.47;ReadPosRankSum=3.382;VQSLOD=3.1163;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:9,0:8:99:116,0,115	0/0:11,0:11:27.09:0,27,1267	0/0:23,0:21:50.07:0,50,1992	0/0:21,0:19:56.86:0,57,2253	0/0:18,0:18:45.15:0,45,2364	0/0:17,0:17:45.15:0,45,2201	0/0:32,0:32:54.45:0,54,2761	0/0:26,0:26:65.29:0,65,3228	0/1:6,3:9:14.66:371,0,15	0/0:25,0:25:60.20:0,60,2780	0/0:13,0:13:27.09:0,27,1435	1/1:8,0:8:12.04:251,12,0	0/1:8,0:8:20.74:243,0,21	0/1:13,1:14:71.62:551,0,72	0/0:27,0:27:54.63:0,55,2418	0/0:15,0:14:39.12:0,39,1736	0/0:23,0:23:45.13:0,45,1959	0/0:28,0:28:33.31:0,33,3335	0/0:21,0:21:60.20:0,60,2887	0/0:9,0:9:24.08:0,24,1087	0/0:27,0:27:54.18:0,54,2497	1/1:6,0:5:6.02:130,6,0	0/1:6,1:7:23.96:175,0,24	0/1:13,0:13:60.85:396,0,61	1/1:6,2:8:12.04:261,12,0	0/0:29,0:29:84.29:0,84,4100	0/0:18,0:18:48.63:0,49,2135	0/0:10,0:10:30.10:0,30,1429
chr10	17065315	.	TA	T	312.23	PASS	AB=0.779;AC=16;AF=0.286;AN=56;BaseQRankSum=10.978;DP=463;FS=7.707;HRun=1;HaplotypeScore=109.6798;InbreedingCoeff=0.7336;MQ=78.45;MQ0=1;MQRankSum=-9.132;QD=4.00;ReadPosRankSum=3.534;VQSLOD=0.3737;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:5,4:7:30.76:31,0,33	0/0:10,0:10:27.06:0,27,405	0/0:22,0:19:41.41:0,41,712	0/0:19,0:16:48.16:0,48,724	0/0:20,0:20:45.15:0,45,718	0/0:19,0:18:45.15:0,45,713	0/0:31,0:31:64.75:0,65,960	0/0:25,0:25:63.12:0,63,1007	1/1:6,4:10:2.02:63,2,0	0/0:27,0:27:60.15:0,60,888	0/0:15,0:15:27.01:0,27,427	1/1:7,2:9:18.92:92,19,0	1/1:4,2:6:12.97:53,13,0	1/1:8,3:11:22.62:84,23,0	0/0:26,0:26:45.15:0,45,718	0/0:14,0:13:36.12:0,36,561	0/0:19,0:19:36.12:0,36,573	0/0:27,0:27:55.89:0,56,1104	0/0:23,0:23:69.18:0,69,1035	0/0:7,0:7:21.07:0,21,335	0/0:22,0:22:51.17:0,51,810	1/1:4,2:5:4.90:18,5,0	1/1:6,2:8:7.73:32,8,0	0/1:11,2:12:19.75:87,0,20	1/1:4,2:6:9.80:35,10,0	0/0:29,0:27:81.25:0,81,1262	0/0:18,0:18:48.16:0,48,737	0/0:11,0:11:30.10:0,30,470
chr10	17065317	.	CCACCCATCTCTT	C	2774	PASS	AB=0.786;AC=10;AF=0.179;AN=56;BaseQRankSum=10.153;DP=475;FS=4.747;HRun=0;HaplotypeScore=180.5610;InbreedingCoeff=0.0838;MQ=77.62;MQ0=3;MQRankSum=-9.132;QD=32.64;ReadPosRankSum=5.869;VQSLOD=2.6005;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:7,3:9:99:154,0,111	0/0:12,0:12:27.09:0,27,1023	0/0:22,0:19:53.52:0,54,1620	0/0:19,0:16:48.13:0,48,1756	0/0:21,0:21:51.05:0,51,2331	0/0:20,0:19:45.14:0,45,1748	0/0:28,0:28:36.76:0,37,1998	0/0:26,0:26:69.20:0,69,3064	0/1:6,4:10:7.10:486,0,7	0/0:26,0:26:66.05:0,66,2783	0/0:17,0:17:31.29:0,31,1398	0/1:7,2:9:25.59:286,0,26	0/1:5,2:7:12.92:301,0,13	1/1:7,3:11:2.23:686,2,0	0/0:26,0:26:48.55:0,49,2032	0/0:14,0:13:36.08:0,36,1352	0/0:19,0:19:36.12:0,36,1652	0/0:28,0:27:39:0,39,2497	0/0:23,0:23:69.24:0,69,3061	0/0:7,0:7:21.07:0,21,1120	0/0:22,0:22:51.16:0,51,2316	0/1:4,0:5:0.66:142,0,1	0/1:7,2:9:37.50:193,0,37	0/1:12,1:12:80.05:453,0,80	0/1:6,0:8:47.71:216,0,48	0/0:29,0:27:81.25:0,81,3607	0/0:18,0:18:51.26:0,51,2123	0/0:12,0:12:35.75:0,36,1479
chr10	17065327	.	CT	C	1396.91	PASS	AB=0.717;AC=39;AF=0.696;AN=56;BaseQRankSum=4.628;DP=458;FS=2.136;HRun=15;HaplotypeScore=94.7272;InbreedingCoeff=0.3774;MQ=59.49;MQ0=14;MQRankSum=-2.384;QD=3.98;ReadPosRankSum=5.266;VQSLOD=1.2527;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,0:10:7.79:24,8,0	0/1:4,2:6:13.27:13,0,20	0/0:15,0:9:8.58:0,9,57	0/0:14,0:9:2.22:0,2,7	0/1:8,13:20:16.46:107,0,16	1/1:4,11:17:25.53:159,26,0	1/1:13,7:21:9.92:62,10,0	0/0:21,1:26:5.20:0,5,212	1/1:5,0:13:15.82:45,16,0	1/1:16,9:27:19.36:120,19,0	1/1:4,11:15:9.96:62,10,0	1/1:4,0:11:10.62:30,11,0	1/1:5,0:7:10.70:36,11,0	1/1:7,0:12:18.45:56,18,0	1/1:12,14:26:10.54:63,11,0	1/1:5,6:11:16.75:102,17,0	1/1:7,13:23:18.78:108,19,0	1/1:12,9:22:6.08:142,6,0	0/0:21,0:23:31.94:0,32,282	0/0:8,0:8:7.24:0,7,56	0/0:16,2:18:4.72:0,5,161	1/1:3,6:8:5.78:38,6,0	1/1:6,1:9:4.92:25,5,0	1/1:9,0:10:8.10:23,8,0	0/1:6,2:8:31.78:59,0,32	1/1:18,5:23:22.55:139,23,0	0/1:12,5:17:11.79:62,0,12	0/1:6,6:14:19.57:95,0,20
chr10	17065394	.	GTAT	G	1026.04	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=10.048;DP=479;FS=11.774;HRun=0;HaplotypeScore=107.7669;InbreedingCoeff=0.9168;MQ=42.57;MQ0=34;MQRankSum=-7.219;QD=20.12;ReadPosRankSum=3.106;VQSLOD=2.6296;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:21:54.19:0,54,1320	0/0:6,0:6:15.05:0,15,369	0/0:19,0:3:9.03:0,9,216	0/0:14,0:2:6.02:0,6,148	0/0:29,0:26:60.21:0,60,1470	1/1:0,10:9:21.04:208,21,0	1/1:2,18:19:34.46:456,34,0	0/0:17,0:15:39.13:0,39,924	0/0:17,0:16:39.13:0,39,960	0/0:30,0:30:81.27:0,81,1950	0/0:13,0:11:27.09:0,27,664	0/0:21,0:21:48.16:0,48,1181	0/0:14,0:13:24.08:0,24,587	0/0:25,0:25:57.20:0,57,1402	0/0:16,0:16:36.12:0,36,886	1/1:0,10:9:27.04:266,27,0	0/0:24,0:22:54.19:0,54,1324	1/1:1,10:9:24.06:256,24,0	0/0:26,0:26:78.22:0,78,1698	0/0:5,0:4:9.03:0,9,203	0/0:22,0:19:48.16:0,48,1166	0/0:20,0:18:42.14:0,42,1030	0/0:8,0:7:9.03:0,9,222	0/0:17,0:15:42.14:0,42,1032	0/0:10,0:10:21.07:0,21,517	0/0:17,1:17:19.88:0,20,1097	0/0:22,0:21:66.23:0,66,1584	0/0:13,0:13:27.09:0,27,664
chr10	17065398	.	CCTAGGT	C	1791.55	PASS	AB=0.637;AC=5;AF=0.089;AN=56;BaseQRankSum=9.505;DP=489;FS=14.821;HRun=0;HaplotypeScore=131.8283;InbreedingCoeff=0.0401;MQ=43.03;MQ0=32;MQRankSum=-7.355;QD=22.39;ReadPosRankSum=3.137;VQSLOD=2.7121;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:22:60.12:0,60,1914	0/0:6,0:6:15.05:0,15,516	0/0:16,0:3:9.03:0,9,255	0/0:13,0:2:6.02:0,6,181	0/0:29,0:26:60.21:0,60,2211	0/1:2,10:11:9.89:328,0,10	0/1:7,18:24:89.60:761,0,90	0/0:20,0:19:51.17:0,51,1595	0/0:16,0:15:39.13:0,39,1453	0/0:28,0:29:81.28:0,81,2935	0/0:13,0:11:30.10:0,30,1046	0/0:21,0:21:54.19:0,54,1862	0/0:13,0:12:27.52:0,28,899	0/0:24,0:24:60.21:0,60,2154	0/0:17,0:17:45.15:0,45,1466	0/1:3,10:12:64.79:416,0,65	0/0:23,0:21:54.19:0,54,1874	0/1:2,10:10:3.93:395,0,4	0/0:26,0:25:75.23:0,75,2381	0/0:5,0:4:6.02:0,6,225	0/0:22,0:19:48.16:0,48,1768	0/0:20,0:17:42.10:0,42,1478	0/0:8,0:7:8.90:0,9,339	0/0:18,0:16:45.15:0,45,1564	0/0:10,0:10:21.07:0,21,784	0/1:17,1:17:0.88:1,0,1656	0/0:22,0:21:63.22:0,63,2359	0/0:13,0:13:27.09:0,27,1014
chr10	17065459	.	ACCATCCAT	A	11637.81	PASS	AB=0.817;AC=41;AF=0.732;AN=56;BaseQRankSum=11.346;DP=614;FS=1.543;HRun=0;HaplotypeScore=190.6531;InbreedingCoeff=0.6788;MQ=58.13;MQ0=5;MQRankSum=-10.545;QD=26.33;ReadPosRankSum=2.659;VQSLOD=4.6329;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:17,6:21:12.04:290,12,0	1/1:2,6:8:15.05:350,15,0	0/0:30,0:25:21.07:0,21,729	0/0:27,0:25:26.08:0,26,708	0/1:9,17:26:62.22:400,0,62	1/1:13,0:13:18.06:335,18,0	1/1:25,0:25:30.10:558,30,0	0/0:30,0:30:51.18:0,51,1801	1/1:5,5:10:9.03:230,9,0	1/1:14,16:26:42.09:873,42,0	1/1:7,14:21:21.91:436,22,0	1/1:6,16:22:42.14:998,42,0	1/1:4,14:18:27.09:663,27,0	1/1:12,10:22:18.06:460,18,0	1/1:3,23:25:45.15:1134,45,0	1/1:16,0:15:21.07:391,21,0	0/1:18,4:21:11.60:275,0,12	0/1:16,0:16:64.64:206,0,65	0/0:22,0:20:39.13:0,39,1556	0/0:19,0:19:45.15:0,45,1865	0/0:44,0:44:99:0,114,4620	1/1:12,15:26:36.08:809,36,0	1/1:7,11:18:17.80:375,18,0	1/1:10,11:21:12.04:268,12,0	1/1:4,14:18:21.07:498,21,0	1/1:13,23:36:66.18:1485,66,0	1/1:9,5:14:24.06:529,24,0	1/1:7,3:9:3.01:77,3,0
chr10	17065468	.	CCATCCATCCAT	C	2090.13	PASS	AB=0.876;AC=10;AF=0.179;AN=56;BaseQRankSum=15.698;DP=624;FS=4.585;HRun=0;HaplotypeScore=248.0630;InbreedingCoeff=-0.2306;MQ=54.44;MQ0=10;MQRankSum=-13.069;QD=11.24;ReadPosRankSum=11.660;VQSLOD=-0.0324;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:22:23.93:0,24,414	0/0:10,0:10:2.80:0,3,128	0/0:36,0:23:63.20:0,63,1798	0/0:29,0:24:69.22:0,69,1875	0/0:25,0:25:42.76:0,43,709	0/1:6,7:13:50.49:490,0,50	0/1:11,11:22:99:767,0,104	0/0:34,0:31:90.30:0,90,3533	0/1:9,0:9:2.83:3,0,164	0/0:28,0:24:7.58:0,8,597	0/0:19,0:19:19.58:0,20,355	0/1:22,0:22:13.57:14,0,357	0/1:18,0:18:17.48:17,0,196	0/0:22,0:22:4.72:0,5,425	0/1:27,0:26:40.88:41,0,150	0/1:6,7:13:16.64:558,0,17	0/0:24,0:23:36.09:0,36,655	0/1:11,4:15:99:306,0,304	0/0:27,0:23:69.23:0,69,2857	0/0:20,0:20:60.20:0,60,2884	0/0:49,0:49:99:0,141,7198	0/0:28,0:26:9.31:0,9,414	0/0:18,0:18:20.94:0,21,283	0/0:19,0:19:12.19:0,12,217	0/0:17,0:17:1.55:0,2,132	0/1:33,0:33:25.54:26,0,596	0/1:14,0:14:2.56:3,0,220	0/0:9,0:8:11.14:0,11,247
chr10	17065657	.	TATCC	T	13992.49	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=10.350;DP=805;FS=6.237;HRun=0;HaplotypeScore=140.5829;InbreedingCoeff=0.9260;MQ=53.88;MQ0=27;MQRankSum=0.961;QD=23.28;ReadPosRankSum=5.145;VQSLOD=4.3413;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,24:32:42.14:699,42,0	1/1:6,6:12:17.98:284,18,0	0/0:22,0:8:23.67:0,24,395	0/0:22,0:6:11.22:0,11,286	1/1:5,18:23:23.56:362,24,0	1/1:5,16:21:39.13:584,39,0	1/1:36,9:44:89.75:1424,90,0	0/0:44,1:31:5.28:0,5,784	1/1:5,29:34:60.20:983,60,0	1/1:15,18:28:54.01:810,54,0	1/1:7,11:17:8.53:150,9,0	1/1:10,26:36:39.13:648,39,0	1/1:6,30:36:48.05:777,48,0	1/1:10,29:39:33.11:549,33,0	1/1:16,16:31:75.25:1170,75,0	1/1:13,18:31:63.20:959,63,0	1/1:20,13:33:38.99:776,39,0	1/1:10,5:15:27.04:388,27,0	0/0:32,0:21:62.90:0,63,1274	0/0:10,0:10:24.08:0,24,570	0/0:71,1:71:99:0,107,3402	1/1:7,14:21:17.79:299,18,0	1/1:3,6:8:9.03:150,9,0	1/1:10,32:41:60.20:998,60,0	1/1:5,18:23:30.10:487,30,0	1/1:12,25:36:69.13:1040,69,0	1/1:9,14:22:21.07:332,21,0	1/1:3,2:5:9.01:123,9,0
chr10	17065714	.	T	TCATC	12887.51	PASS	AB=0.798;AC=26;AF=0.464;AN=56;BaseQRankSum=-8.125;DP=890;FS=2.054;HRun=0;HaplotypeScore=180.3856;InbreedingCoeff=0.8772;MQ=64.70;MQ0=4;MQRankSum=-4.442;QD=34.09;ReadPosRankSum=0.840;VQSLOD=4.6140;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:37:66.22:0,66,1057	1/1:7,2:10:18.02:295,18,0	0/0:35,0:24:45.15:0,45,731	0/0:35,0:30:47.67:0,48,714	1/1:13,13:26:30.09:636,30,0	1/1:10,15:25:48.15:1058,48,0	1/1:17,29:47:60.21:1478,60,0	0/0:32,0:32:51.16:0,51,824	0/0:42,0:42:75.22:0,75,1198	1/1:16,16:32:63.20:1419,63,0	1/1:9,7:16:18.05:291,18,0	0/0:41,0:41:81.22:0,81,1239	0/0:42,0:42:66.17:0,66,1035	0/0:41,0:41:63.19:0,63,1015	1/1:12,36:56:99:2330,99,0	1/1:11,21:32:66.23:1590,66,0	0/1:11,22:33:5.02:918,0,5	1/1:6,7:13:22.95:573,23,0	0/0:21,0:21:39.12:0,39,617	0/0:23,0:23:51.14:0,51,789	0/0:72,0:72:99:0,109,2313	0/0:30,0:29:45.04:0,45,655	0/0:8,0:8:9.03:0,9,150	0/0:53,0:53:80.91:0,81,1306	0/1:21,0:21:4.61:5,0,495	1/1:20,12:31:48.14:1079,48,0	1/1:14,11:25:39.13:921,39,0	1/1:1,7:8:12.04:297,12,0
chr10	17065766	.	T	TCATC	11642.20	PASS	AB=0.920;AC=25;AF=0.463;AN=54;BaseQRankSum=-2.452;DP=1005;FS=0.767;HRun=0;HaplotypeScore=182.5425;InbreedingCoeff=0.8872;MQ=52.28;MQ0=24;MQRankSum=0.951;QD=24.25;ReadPosRankSum=0.163;VQSLOD=4.7285;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:28,4:31:39.05:638,39,0	0/0:10,0:10:12.04:0,12,159	./.	0/0:56,0:19:8.97:0,9,73	0/0:30,0:30:20.95:0,21,298	0/1:21,2:22:8.33:562,0,8	1/1:49,3:52:69.89:874,70,0	0/0:33,0:28:24.01:0,24,245	1/1:41,8:49:99:1668,105,0	0/0:31,0:28:32.99:0,33,395	0/0:21,0:20:19.12:0,19,280	1/1:53,11:64:81.27:1868,81,0	1/1:37,11:48:45.66:1663,46,0	1/1:34,7:41:67.69:1164,68,0	0/0:54,0:53:60.01:0,60,806	1/1:26,4:30:48.15:940,48,0	0/0:35,0:35:62.02:0,62,929	1/1:17,7:24:48.14:953,48,0	0/0:24,0:17:14.98:0,15,163	0/0:21,0:21:30.05:0,30,417	0/0:88,0:89:99:0,137,1765	1/1:16,8:22:5.87:91,6,0	1/1:6,8:13:6.02:143,6,0	1/1:30,27:58:37.28:804,37,0	1/1:18,0:20:24.86:275,25,0	0/0:32,0:31:45.03:0,45,554	0/0:19,0:19:24.03:0,24,355	0/0:16,0:16:27.06:0,27,397
chr10	17067888	.	A	ACCC	5741.99	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-6.400;DP=649;FS=10.159;HRun=8;HaplotypeScore=99.0492;InbreedingCoeff=0.9969;MQ=83.43;MQ0=1;MQRankSum=-0.358;QD=26.96;ReadPosRankSum=0.245;VQSLOD=2.2573;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,31:47:65.33:1215,65,0	0/0:9,0:9:27.09:0,27,355	0/0:17,0:17:39.07:0,39,482	0/0:26,0:25:36.07:0,36,496	0/0:19,0:19:57.13:0,57,711	0/0:22,0:22:63.19:0,63,813	0/0:30,0:30:75.21:0,75,986	0/0:34,0:34:78.22:0,78,1023	1/1:4,19:25:41.78:779,42,0	0/0:22,0:23:40.53:0,41,549	0/0:10,0:10:24.02:0,24,296	1/1:7,14:24:35.73:597,36,0	1/1:5,15:22:48.12:892,48,0	1/1:3,16:20:33.56:630,34,0	0/0:15,0:15:36.09:0,36,473	0/0:28,0:28:75.21:0,75,970	0/0:22,0:22:54.16:0,54,708	0/0:17,0:17:45.11:0,45,576	0/0:34,0:33:93.24:0,93,1187	0/0:19,0:19:36.03:0,36,454	0/0:41,0:41:90.18:0,90,1159	1/1:4,12:18:17.79:362,18,0	1/1:7,4:14:21.02:342,21,0	1/1:5,11:19:23.65:447,24,0	1/1:8,12:24:26.81:480,27,0	0/0:25,0:25:57.13:0,57,749	0/0:28,0:28:75.17:0,75,951	0/0:17,0:16:42.07:0,42,532
chr10	17068512	.	TAA	T	26128.58	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=17.404;DP=813;FS=6.459;HRun=3;HaplotypeScore=148.0450;InbreedingCoeff=0.9977;MQ=59.14;MQ0=10;MQRankSum=3.205;QD=40.57;ReadPosRankSum=5.575;VQSLOD=3.9394;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,56:58:99:2434,160,0	1/1:0,13:13:39.13:597,39,0	0/0:19,0:13:24.08:0,24,464	0/0:8,0:8:18.06:0,18,326	1/1:0,32:32:93.32:1424,93,0	1/1:0,33:33:87.30:1332,87,0	1/1:0,26:26:60.20:919,60,0	0/0:44,0:41:99:0,117,2190	1/1:2,30:31:78.26:1194,78,0	1/1:2,21:23:66.21:989,66,0	1/1:0,21:21:60.20:918,60,0	1/1:0,24:24:72.24:1102,72,0	1/1:2,35:37:96.33:1470,96,0	1/1:0,31:31:69.23:1056,69,0	1/1:0,33:33:93.32:1424,93,0	1/1:1,47:47:99:1929,126,0	1/1:0,16:16:48.16:735,48,0	1/1:2,31:32:78.26:1194,78,0	0/0:35,0:33:99:0,99,1908	0/0:28,0:28:84.28:0,84,1590	0/0:34,0:34:96.30:0,96,1788	1/1:0,25:26:75.25:1146,75,0	1/1:2,19:20:54.18:827,54,0	1/1:2,34:36:90.31:1378,90,0	1/1:1,25:26:69.23:1056,69,0	1/1:2,32:33:93.29:1399,93,0	1/1:1,27:28:78.26:1193,78,0	1/1:0,13:13:27.09:413,27,0
chr10	17068680	.	CA	C	3196.34	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=6.968;DP=723;FS=4.657;HRun=1;HaplotypeScore=75.4619;InbreedingCoeff=0.9977;MQ=79.43;MQ0=0;MQRankSum=-0.254;QD=38.05;ReadPosRankSum=2.254;VQSLOD=4.3720;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,123,1961	0/0:14,0:14:39.13:0,39,606	0/0:24,0:24:72.25:0,72,1148	0/0:19,0:19:54.15:0,54,822	0/0:26,0:26:75.21:0,75,1169	1/1:0,25:25:72.24:1007,72,0	1/1:0,17:17:48.16:671,48,0	0/0:40,0:40:99:0,120,1871	0/0:29,0:29:87.28:0,87,1368	0/0:29,0:29:84.26:0,84,1299	0/0:23,0:23:69.22:0,69,1073	0/0:36,0:36:99:0,108,1676	0/0:29,0:29:87.26:0,87,1334	0/0:24,0:24:72.25:0,72,1151	0/0:36,0:36:99:0,108,1727	1/1:0,29:29:81.27:1133,81,0	0/0:24,0:24:72.18:0,72,1097	1/1:0,13:13:39.13:545,39,0	0/0:27,0:27:81.28:0,81,1296	0/0:28,0:28:84.26:0,84,1318	0/0:34,0:34:99:0,102,1626	0/0:25,0:25:75.26:0,75,1199	0/0:14,0:14:42.14:0,42,671	0/0:26,0:26:78.14:0,78,1157	0/0:19,0:19:57.19:0,57,898	0/0:30,0:30:87.30:0,87,1390	0/0:35,0:35:99:0,102,1509	0/0:6,0:6:18.06:0,18,288
chr10	17069006	.	C	CTAG	20160.77	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=13.735;DP=606;FS=1.160;HRun=0;HaplotypeScore=164.7429;InbreedingCoeff=0.9876;MQ=76.10;MQ0=0;MQRankSum=-6.387;QD=43.83;ReadPosRankSum=5.125;VQSLOD=6.0453;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:14,12:27:54.18:961,54,0	1/1:3,5:8:23.91:317,24,0	0/0:14,0:14:39.07:0,39,632	0/0:20,0:20:49.27:0,49,702	1/1:8,16:24:42.10:634,42,0	1/1:15,6:21:63.21:1244,63,0	1/1:0,16:16:48.14:578,48,0	0/0:24,0:24:66.23:0,66,1225	1/1:18,6:24:72.20:1285,72,0	1/1:10,24:34:99:1572,102,0	1/1:10,7:17:38.82:638,39,0	1/1:17,11:28:78.04:1239,78,0	1/1:15,4:19:57.02:927,57,0	1/1:18,9:28:78.21:1455,78,0	1/1:21,9:30:81.26:1489,81,0	1/1:9,7:16:48.16:846,48,0	1/1:22,8:29:63.16:1099,63,0	1/1:18,4:22:42.14:857,42,0	0/0:27,0:27:81.28:0,81,1489	0/0:21,0:21:63.22:0,63,1170	0/0:40,0:40:99:0,114,2042	1/1:9,2:11:30.01:516,30,0	1/1:11,4:15:42.14:761,42,0	1/1:20,9:29:30.03:558,30,0	1/1:12,10:22:66.05:1163,66,0	1/1:7,11:18:54.18:956,54,0	1/1:13,4:17:48.16:922,48,0	1/1:2,2:4:9.03:146,9,0
chr10	17069008	.	CTTA	C	12847.89	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=14.982;DP=597;FS=2.575;HRun=0;HaplotypeScore=187.0603;InbreedingCoeff=0.9854;MQ=77.01;MQ0=0;MQRankSum=-6.044;QD=28.55;ReadPosRankSum=5.786;VQSLOD=5.1911;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:14,12:26:52.17:589,52,0	1/1:3,5:8:16.80:171,17,0	0/0:15,0:15:42.12:0,42,862	0/0:20,0:20:39.29:0,39,752	1/1:6,16:22:31.03:248,31,0	1/1:15,6:21:63:867,63,0	1/1:1,16:17:49.83:317,50,0	0/0:25,0:25:72.25:0,72,1775	1/1:16,6:22:62.64:793,63,0	1/1:10,24:34:97.82:992,98,0	1/1:9,7:16:30.61:389,31,0	1/1:16,11:27:65.96:770,66,0	1/1:14,4:18:50.35:608,50,0	1/1:18,9:27:71.57:920,72,0	1/1:19,9:28:74.41:921,74,0	1/1:10,7:17:50.65:588,51,0	1/1:20,8:28:56.46:712,56,0	1/1:19,4:23:45.05:633,45,0	0/0:28,0:28:81.28:0,81,1987	0/0:21,0:21:63.22:0,63,1505	0/0:38,0:38:99:0,114,2745	1/1:9,2:11:26.85:338,27,0	1/1:11,4:15:38.37:479,38,0	1/1:20,9:29:29.60:379,30,0	1/1:12,10:22:61.01:769,61,0	1/1:7,11:18:53.91:633,54,0	1/1:13,4:17:48.01:640,48,0	1/1:2,2:4:8.96:92,9,0
chr10	17069994	.	AAC	A	3145.72	PASS	AB=0.842;AC=17;AF=0.304;AN=56;BaseQRankSum=-1.256;DP=739;FS=25.310;HRun=0;HaplotypeScore=124.4021;InbreedingCoeff=0.7287;MQ=68.07;MQ0=10;MQRankSum=3.019;QD=11.61;ReadPosRankSum=3.704;VQSLOD=1.3591;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,21:38:44.63:458,45,0	0/0:3,0:8:8.99:0,9,76	0/0:39,0:22:12.51:0,13,180	0/0:43,0:26:26.59:0,27,246	0/0:9,0:19:12.21:0,12,147	0/0:20,0:23:11.61:0,12,101	0/0:32,0:34:21.20:0,21,168	0/0:26,0:26:45.30:0,45,734	0/1:14,23:38:48.53:364,0,49	0/0:9,0:20:43.49:0,43,370	0/0:5,0:18:18.64:0,19,175	1/1:11,11:22:27.08:312,27,0	1/1:3,19:22:39.11:450,39,0	1/1:12,16:27:27.08:312,27,0	0/0:4,0:19:17.83:0,18,158	0/0:6,0:16:11.94:0,12,97	0/0:8,0:40:53.96:0,54,474	0/0:11,0:18:17.10:0,17,123	0/0:24,0:24:30.99:0,31,599	0/1:16,0:16:4.45:4,0,367	0/0:53,1:54:60.36:0,60,1241	1/1:9,15:25:17.53:279,18,0	1/1:5,15:20:30.09:347,30,0	1/1:12,28:40:16.32:611,16,0	0/1:19,2:21:63.68:208,0,64	0/0:13,0:27:57.35:0,57,534	0/0:13,0:25:21.46:0,21,185	0/0:9,0:12:14.71:0,15,145
chr10	17070501	.	TTCCCC	T	8891.15	PASS	AB=0.568;AC=25;AF=0.446;AN=56;BaseQRankSum=13.044;DP=709;FS=7.605;HRun=0;HaplotypeScore=143.4471;InbreedingCoeff=0.9175;MQ=72.41;MQ0=6;MQRankSum=-7.313;QD=36.14;ReadPosRankSum=4.152;VQSLOD=4.5641;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:96.33:0,96,2787	1/1:1,6:7:12.04:237,12,0	0/0:57,0:38:79.57:0,80,1587	0/0:59,0:36:47.81:0,48,1168	1/1:1,13:14:27.04:496,27,0	1/1:5,14:19:30.10:595,30,0	1/1:7,32:39:60.21:1176,60,0	0/0:22,0:22:51.17:0,51,1228	0/0:28,0:28:69.24:0,69,1974	1/1:1,11:12:33.07:615,33,0	1/1:2,8:10:17.78:317,18,0	0/0:26,0:26:60.20:0,60,1700	0/0:25,0:25:72.23:0,72,1980	0/0:34,0:34:93.30:0,93,2647	1/1:10,30:38:72.25:1429,72,0	0/1:6,19:25:37.95:901,0,38	1/1:6,19:25:48.16:952,48,0	1/1:2,13:15:27.09:536,27,0	0/0:23,0:23:54.18:0,54,1484	0/0:18,0:18:51.18:0,51,1500	0/0:57,0:55:99:0,115,3962	0/0:26,0:26:72.25:0,72,2032	0/0:12,0:12:33.11:0,33,879	0/0:27,0:27:72.23:0,72,1888	0/0:13,0:13:36.12:0,36,1062	1/1:1,11:12:33.11:631,33,0	1/1:8,16:24:39.13:773,39,0	1/1:1,3:4:12.04:233,12,0
chr10	17070636	.	A	AGAGGGAG	11109.25	PASS	AB=0.938;AC=45;AF=0.804;AN=56;BaseQRankSum=-5.258;DP=519;FS=23.756;HRun=0;HaplotypeScore=119.1276;InbreedingCoeff=0.6682;MQ=64.25;MQ0=0;MQRankSum=-9.025;QD=27.63;ReadPosRankSum=1.235;VQSLOD=2.8558;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:15,10:26:12.04:441,12,0	1/1:2,2:6:12.04:354,12,0	0/0:16,0:12:2.35:0,2,69	0/1:14,0:12:20.50:21,0,79	1/1:11,9:22:6.02:84,6,0	1/1:7,6:14:15.05:543,15,0	1/1:13,10:25:15.05:519,15,0	0/0:17,0:17:12.04:0,12,276	1/1:16,10:28:27.09:935,27,0	1/1:12,9:22:30.10:1024,30,0	1/1:7,1:9:6.02:148,6,0	1/1:9,10:19:21.07:778,21,0	1/1:11,10:22:24.08:821,24,0	1/1:10,15:26:33.11:1222,33,0	1/1:10,14:24:18.06:653,18,0	1/1:15,5:22:12.04:435,12,0	1/1:11,3:15:15.05:490,15,0	1/1:5,3:8:6.02:223,6,0	0/0:22,0:22:33.10:0,33,706	0/0:12,0:12:20.90:0,21,426	0/0:50,0:50:90.27:0,90,1918	1/1:11,5:17:12.04:434,12,0	1/1:7,8:15:8.78:218,9,0	1/1:11,6:19:6.02:222,6,0	1/1:6,5:13:9.03:334,9,0	1/1:9,5:15:18.06:558,18,0	1/1:5,6:12:14.74:542,15,0	1/1:4,1:6:3.01:111,3,0
chr10	17070986	.	A	AACACAC	5054.23	PASS	AB=0.988;AC=36;AF=0.720;AN=50;BaseQRankSum=4.917;DP=692;FS=29.441;HRun=0;HaplotypeScore=254.8673;InbreedingCoeff=0.3938;MQ=58.69;MQ0=21;MQRankSum=-4.491;QD=10.17;ReadPosRankSum=-0.014;VQSLOD=2.4705;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:27:1:140,0,1	1/1:10,0:9:8.62:110,9,0	0/0:35,0:15:3.01:0,3,62	0/0:38,0:23:20.38:0,20,292	1/1:18,0:16:6.02:90,6,0	1/1:17,0:17:5.90:47,6,0	0/1:25,0:22:0:0,0,0	0/0:28,0:28:39.07:0,39,714	1/1:30,0:29:19.88:369,20,0	1/1:39,0:37:56.42:898,56,0	./.	1/1:32,0:27:10.84:157,11,0	1/1:31,0:29:28.44:503,28,0	1/1:30,0:29:14.16:240,14,0	1/1:37,0:34:12.02:218,12,0	1/1:23,3:26:28.27:495,28,0	1/1:14,0:14:12.01:176,12,0	0/1:12,1:13:32.87:337,0,33	0/1:13,0:12:9.03:9,0,38	0/1:21,0:21:31.95:32,0,244	0/0:43,0:40:36.74:0,37,485	1/1:33,0:33:17.86:293,18,0	1/1:24,0:22:3.01:43,3,0	./.	./.	1/1:20,0:20:38.72:562,39,0	1/1:26,0:23:17.44:220,17,0	0/1:8,0:6:13.99:116,0,14
chr10	17071008	.	CAGAG	C	1717.38	PASS	AB=0.968;AC=28;AF=0.636;AN=44;BaseQRankSum=-0.531;DP=633;FS=0.000;HRun=0;HaplotypeScore=234.8816;InbreedingCoeff=0.2010;MQ=36.40;MQ0=33;MQRankSum=1.068;QD=4.18;ReadPosRankSum=0.170;VQSLOD=2.1673;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:22:2.22:0,2,7	1/1:6,1:8:2.43:31,2,0	./.	./.	1/1:9,1:11:1.19:17,1,0	0/1:21,0:19:0:0,0,0	0/0:14,0:12:0:0,0,0	0/0:29,0:28:4.17:0,4,20	1/1:20,1:19:5.98:50,6,0	1/1:26,0:27:21.02:219,21,0	./.	1/1:32,1:30:11.75:86,12,0	1/1:22,4:25:13.68:144,14,0	1/1:21,3:26:2.56:33,3,0	0/1:29,1:31:0:0,0,0	0/1:27,0:25:5.79:91,0,6	1/1:10,0:9:3.89:37,4,0	0/1:16,0:15:23.21:23,0,93	0/1:19,0:17:99:151,0,158	1/1:18,0:19:16.50:216,17,0	0/1:56,0:51:10.55:423,0,11	0/0:22,2:28:4.12:0,4,18	0/0:19,0:22:0.72:0,1,2	./.	./.	1/1:13,2:16:12.03:156,12,0	1/1:19,1:23:15.91:159,16,0	./.
chr10	17071033	.	AGAGAGAGAGAGAGAGAG	A	1960.55	PASS	AB=0.959;AC=16;AF=0.296;AN=54;BaseQRankSum=3.922;DP=647;FS=13.506;HRun=0;HaplotypeScore=305.1696;InbreedingCoeff=-0.2610;MQ=35.48;MQ0=50;MQRankSum=-3.111;QD=5.52;ReadPosRankSum=2.128;VQSLOD=0.9410;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:19:5.83:0,6,141	0/1:8,1:8:99:125,0,103	./.	0/0:2,0:1:3.01:0,3,37	0/1:24,1:23:17.53:18,0,174	0/1:20,0:17:0:0,0,0	0/0:20,0:14:2.11:0,2,26	0/0:45,0:38:99:0,117,3103	0/1:21,1:20:99:103,0,109	0/1:24,1:23:99:368,0,527	0/0:6,2:6:3.12:0,3,8	0/1:40,0:34:99:241,0,171	0/1:25,0:21:99:289,0,251	0/0:29,0:27:4.77:0,5,64	0/1:36,4:36:67.61:68,0,113	0/1:24,0:23:78.01:78,0,408	0/1:16,0:14:99:200,0,203	0/1:18,0:16:56.79:57,0,565	0/0:20,0:16:42.01:0,42,1690	0/0:25,0:25:66.22:0,66,2574	0/0:60,0:53:99:0,99,4068	0/0:27,0:25:9.18:0,9,205	0/0:23,0:22:2.61:0,3,76	0/1:31,0:28:0:0,0,0	1/1:21,0:18:2.88:15,3,0	0/1:20,1:19:99:121,0,548	0/1:14,2:14:99:417,0,166	0/0:8,0:2:6.02:0,6,68
chr10	17071035	.	AGAGAGAGAGAGAGAGAACACACAC	A	2166.64	PASS	AB=0.900;AC=15;AF=0.288;AN=52;BaseQRankSum=4.247;DP=655;FS=50.191;HRun=0;HaplotypeScore=352.7139;InbreedingCoeff=-0.0629;MQ=36.43;MQ0=50;MQRankSum=-5.292;QD=6.90;ReadPosRankSum=1.031;VQSLOD=0.8336;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:22,1:18:27.89:28,0,88	0/0:11,0:10:18.83:0,19,347	./.	0/0:3,0:2:5.98:0,6,140	0/0:25,0:24:41.88:0,42,1277	0/0:8,0:17:8.90:0,9,142	0/1:22,0:16:1.75:2,0,208	0/0:47,0:40:99:0,116,2854	0/1:21,0:20:49.44:214,0,49	0/1:23,0:22:99:171,0,1185	0/0:8,0:6:9.03:0,9,270	0/1:21,18:34:99:529,0,117	0/1:17,8:21:99:743,0,135	1/1:14,15:28:9.83:80,10,0	0/0:37,0:34:65.21:0,65,2027	0/1:24,0:23:82.96:83,0,384	0/1:18,0:15:5.72:6,0,849	0/1:17,0:16:99:219,0,470	0/0:22,0:18:42.14:0,42,2022	0/0:25,0:25:64.77:0,65,3791	0/0:61,0:54:99:0,102,5893	0/1:26,2:26:96.41:96,0,109	0/1:12,9:20:30.36:42,0,30	./.	1/1:11,10:18:8.77:107,9,0	0/0:22,0:20:52.49:0,52,1323	0/0:14,0:14:13.22:0,13,631	0/0:8,0:2:6.02:0,6,201
chr10	17071037	.	AGAGAGAGAGAGAGAACACACAC	A	2070.50	PASS	AB=0.968;AC=14;AF=0.269;AN=52;BaseQRankSum=4.318;DP=660;FS=42.733;HRun=0;HaplotypeScore=339.2963;InbreedingCoeff=-0.0523;MQ=37.11;MQ0=51;MQRankSum=-5.305;QD=6.92;ReadPosRankSum=0.430;VQSLOD=1.4066;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:18:27.89:28,0,71	0/0:11,0:10:18.81:0,19,340	./.	0/0:3,0:2:5.98:0,6,140	0/0:23,0:22:41.88:0,42,1260	0/0:20,0:17:8.90:0,9,141	0/1:23,0:17:11.05:11,0,208	0/0:47,0:40:99:0,103,2303	0/1:18,0:18:32.33:195,0,32	0/1:24,0:23:99:158,0,1328	0/0:7,0:5:9.03:0,9,270	0/1:39,0:34:95.79:509,0,96	0/1:24,1:21:99:731,0,107	1/1:28,0:27:9.83:89,10,0	0/0:37,0:34:68.24:0,68,2146	0/1:28,0:27:74.22:74,0,355	0/0:20,0:17:3.56:0,4,943	0/1:19,0:16:99:186,0,419	0/0:23,0:19:42.14:0,42,1862	0/0:26,0:25:64.77:0,65,3327	0/0:61,0:54:99:0,102,5278	0/1:22,7:27:95.51:96,0,96	0/1:20,0:19:22.34:42,0,22	./.	1/1:21,0:18:8.77:107,9,0	0/0:22,0:20:57.80:0,58,1267	0/0:17,0:15:21.31:0,21,755	0/0:8,0:2:6.02:0,6,201
chr10	17071043	.	AGAGAGAGAACAC	A	1276.58	PASS	AB=0.975;AC=18;AF=0.321;AN=56;BaseQRankSum=7.180;DP=673;FS=25.255;HRun=0;HaplotypeScore=268.6388;InbreedingCoeff=0.0411;MQ=38.23;MQ0=52;MQRankSum=-7.552;QD=3.45;ReadPosRankSum=5.484;VQSLOD=0.9349;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:18:5.73:0,6,39	0/0:11,0:10:7.56:0,8,199	0/0:6,0:2:5.38:0,5,68	0/0:5,0:3:6.02:0,6,120	0/0:22,0:21:41.59:0,42,677	0/1:20,0:17:0:0,0,0	0/1:27,0:21:7.93:8,0,64	0/0:46,0:39:71.50:0,72,1048	0/1:19,0:18:2.76:72,0,3	0/1:24,0:22:99:156,0,686	0/0:10,0:8:18.06:0,18,327	1/1:39,0:35:1.71:279,2,0	0/1:25,0:21:5.40:353,0,5	1/1:29,0:28:6.28:49,6,0	0/0:40,0:36:78.40:0,78,1375	0/1:19,9:27:95.64:150,0,96	0/0:23,0:19:7.17:0,7,620	0/1:19,0:16:99:144,0,211	0/1:22,0:19:50.31:50,0,643	0/0:27,0:27:64.51:0,65,1345	0/0:58,0:52:96.20:0,96,2246	0/1:29,0:27:2.39:2,0,50	0/0:20,0:20:2.51:0,3,10	0/1:31,0:28:0:0,0,0	1/1:20,0:17:2.92:44,3,0	0/1:19,0:17:31.42:31,0,587	0/1:17,1:16:83.89:84,0,427	0/0:9,0:3:9.03:0,9,155
chr10	17071046	.	GAGAGAA	G	854.42	PASS	AB=0.994;AC=19;AF=0.339;AN=56;BaseQRankSum=4.604;DP=676;FS=8.386;HRun=0;HaplotypeScore=230.9069;InbreedingCoeff=-0.0255;MQ=38.42;MQ0=55;MQRankSum=-2.558;QD=2.21;ReadPosRankSum=7.308;VQSLOD=1.0076;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:19:3:0,3,27	0/1:11,0:10:16.86:17,0,79	1/1:9,0:2:4.78:18,5,0	0/0:8,0:5:0.80:0,1,30	0/0:21,1:21:38:0,38,280	0/1:21,0:18:0:0,0,0	0/0:25,0:19:6.27:0,6,35	0/0:46,0:39:99:0,105,737	1/1:19,0:18:5.65:46,6,0	0/1:22,1:21:99:151,0,268	0/0:10,0:8:17.92:0,18,149	0/1:38,0:33:2.07:99,0,2	1/1:24,0:20:9.04:159,9,0	0/1:29,0:28:21.62:22,0,27	0/0:40,0:36:71.02:0,71,541	0/1:25,0:24:51.89:67,0,52	0/0:25,0:21:9.98:0,10,261	0/1:21,0:18:0.14:0,0,172	0/1:23,1:21:68.13:68,0,390	0/1:27,0:26:96.14:96,0,245	0/1:58,0:51:99:99,0,531	0/0:29,0:27:11.70:0,12,71	0/0:20,1:20:5.42:0,5,23	0/0:30,0:27:0:0,0,0	0/1:21,0:18:0.09:0,0,9	0/1:19,0:17:70.62:71,0,250	0/1:18,0:16:90.73:91,0,148	0/0:9,0:3:8.92:0,9,65
chr10	17071047	.	AGAGAACACACAC	A	1525.45	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=6.505;DP=673;FS=14.452;HRun=0;HaplotypeScore=260.6495;InbreedingCoeff=0.4283;MQ=38.61;MQ0=56;MQRankSum=-6.161;QD=4.10;ReadPosRankSum=-0.173;VQSLOD=1.0836;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:19:0.31:32,0,0	0/0:11,0:10:14.97:0,15,449	0/0:9,0:2:6.02:0,6,180	0/0:8,0:5:15.01:0,15,485	0/0:22,0:21:20.26:0,20,1174	0/0:21,0:18:8.79:0,9,141	0/1:25,0:19:11.53:12,0,207	0/0:43,0:36:61.74:0,62,1608	1/1:7,12:18:11.87:150,12,0	0/1:23,0:21:43.38:43,0,1370	0/0:10,0:8:18.06:0,18,608	1/1:38,0:33:17.60:445,18,0	1/1:24,0:20:24.91:516,25,0	1/1:27,1:27:12.07:169,12,0	0/0:38,0:36:81.10:0,81,2548	0/1:25,0:24:4.43:4,0,91	0/0:24,0:20:41.58:0,42,1406	0/1:21,0:18:20.08:20,0,220	0/1:26,0:22:4.73:5,0,1037	0/0:25,0:25:15.63:0,16,1908	0/0:58,0:51:28.30:0,28,2804	1/1:28,1:27:1.40:99,1,0	1/1:20,0:20:7.60:51,8,0	0/1:30,0:27:0:0,0,0	1/1:21,0:18:8.77:107,9,0	0/1:18,0:16:52.97:53,0,1200	0/0:20,0:18:37.99:0,38,1206	0/0:9,0:3:9.03:0,9,307
chr10	17071048	.	GAGAA	G	647.52	PASS	AB=0.996;AC=20;AF=0.357;AN=56;BaseQRankSum=4.785;DP=672;FS=3.790;HRun=0;HaplotypeScore=216.4373;InbreedingCoeff=0.0465;MQ=38.94;MQ0=54;MQRankSum=-2.291;QD=1.67;ReadPosRankSum=6.846;VQSLOD=2.2390;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:19:0.17:1,0,0	0/0:12,0:11:6.66:0,7,133	1/1:10,0:2:4.78:18,5,0	0/1:9,0:6:3.03:3,0,27	0/0:22,0:21:36.80:0,37,266	0/1:21,0:18:0:0,0,0	0/0:25,0:19:6.27:0,6,35	0/0:43,0:36:91.80:0,92,653	1/1:18,1:18:5.98:55,6,0	0/1:20,1:20:62.46:62,0,253	0/0:10,0:8:17.92:0,18,149	1/1:37,1:33:0.22:75,0,0	1/1:23,0:19:12.27:97,12,0	0/1:28,0:27:4.58:5,0,28	0/0:40,0:36:71:0,71,541	0/1:25,0:24:27.07:36,0,27	0/0:24,0:20:25.22:0,25,273	0/0:20,0:17:1.66:0,2,127	0/1:27,0:23:53.09:53,0,328	0/1:27,0:26:99:154,0,240	0/1:58,0:52:99:148,0,387	0/0:29,0:27:2.13:0,2,42	0/0:21,0:20:4.05:0,4,10	0/0:28,1:26:0:0,0,0	0/1:20,0:17:0.09:0,0,9	0/1:18,0:16:55.41:55,0,234	0/1:20,0:18:30.82:31,0,188	0/0:9,0:4:8.92:0,9,65
chr10	17071051	.	AACAC	A	421.04	PASS	AB=0.899;AC=20;AF=0.370;AN=54;BaseQRankSum=5.012;DP=716;FS=12.942;HRun=0;HaplotypeScore=223.3923;InbreedingCoeff=0.5387;MQ=38.91;MQ0=58;MQRankSum=-5.783;QD=1.29;ReadPosRankSum=1.937;VQSLOD=1.4929;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:18,0:19:0.01:0,0,0	0/0:10,0:11:20.98:0,21,395	0/0:12,0:2:5.38:0,5,68	0/0:12,0:8:18.53:0,19,379	0/0:24,0:24:38.96:0,39,712	0/1:20,1:19:0:0,0,0	0/1:14,12:21:8.29:8,0,65	0/0:42,0:35:50.28:0,50,827	1/1:20,0:19:3:28,3,0	0/0:30,0:30:73.94:0,74,1307	0/0:10,0:9:17.89:0,18,326	1/1:39,0:33:14.84:139,15,0	1/1:23,0:20:14.89:127,15,0	0/1:29,0:28:13.61:15,0,14	0/0:36,0:39:79.61:0,80,1489	1/1:21,0:22:2.78:18,3,0	0/0:24,0:23:44.94:0,45,844	1/1:9,8:17:14.52:178,15,0	0/1:28,0:23:16.02:16,0,419	0/0:27,0:26:59.38:0,59,1113	0/0:60,0:55:92.90:0,93,1975	1/1:29,0:28:2.27:11,2,0	0/1:21,0:20:0.09:0,0,0	./.	1/1:20,0:17:2.92:44,3,0	0/0:19,0:18:42.14:0,42,742	0/0:19,0:21:34.61:0,35,818	0/0:9,0:4:9.03:0,9,155
chr10	17073563	.	TACACAC	T	2430.99	PASS	AB=0.936;AC=43;AF=0.827;AN=52;BaseQRankSum=3.386;DP=619;FS=1.451;HRun=0;HaplotypeScore=135.6874;InbreedingCoeff=0.0571;MQ=69.44;MQ0=26;MQRankSum=-0.308;QD=4.84;ReadPosRankSum=0.633;VQSLOD=2.5584;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:30,14:43:2.87:60,3,0	1/1:5,0:11:12.04:168,12,0	./.	./.	1/1:6,0:11:3.01:42,3,0	0/0:13,0:17:1.28:0,1,46	0/1:30,0:30:1.67:2,0,56	0/1:26,0:26:13.98:14,0,15	1/1:16,9:26:14.56:272,15,0	1/1:12,0:21:0.34:80,0,0	1/1:10,0:13:3.01:42,3,0	1/1:13,6:21:15.02:235,15,0	1/1:9,5:14:6.02:121,6,0	1/1:5,3:7:3.01:61,3,0	1/1:17,0:24:8.82:125,9,0	1/1:19,0:28:4.43:10,4,0	1/1:21,0:24:6.02:84,6,0	0/1:8,2:14:27.10:112,0,27	0/1:22,0:20:20.80:21,0,53	0/1:13,0:12:14.58:46,0,15	0/0:20,0:19:3:0,3,25	1/1:17,7:24:9.10:125,9,0	1/1:12,3:14:3.48:61,3,0	1/1:36,2:38:22.52:314,23,0	1/1:6,9:16:6.02:102,6,0	1/1:14,0:20:7.49:88,7,0	1/1:12,0:22:20.92:293,21,0	1/1:3,0:6:6.02:84,6,0
chr10	17074039	.	ACACC	A	4318.24	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-5.737;DP=627;FS=8.545;HRun=0;HaplotypeScore=176.3299;InbreedingCoeff=0.9942;MQ=85.61;MQ0=1;MQRankSum=-7.440;QD=46.94;ReadPosRankSum=0.297;VQSLOD=5.0466;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:96.33:0,96,1650	0/0:7,0:7:21.07:0,21,361	0/0:18,0:18:54.18:0,54,1403	0/0:24,0:25:58.14:0,58,1700	0/0:28,0:28:60.21:0,60,1021	1/1:4,22:26:57.20:1104,57,0	1/1:4,16:20:45.11:832,45,0	0/0:26,0:26:78.27:0,78,2046	0/0:19,0:19:54.18:0,54,954	0/0:25,0:25:69.24:0,69,1253	0/0:14,0:14:30.10:0,30,519	0/0:33,0:33:90.31:0,90,1578	0/0:11,0:11:30.10:0,30,520	0/0:17,0:17:51.17:0,51,883	0/0:20,0:20:51.16:0,51,879	1/1:1,27:28:72.25:1394,72,0	0/0:44,0:44:99:0,114,1979	1/1:1,17:18:51.17:988,51,0	0/0:18,0:18:51.18:0,51,1393	0/0:24,0:24:72.25:0,72,1907	0/0:23,0:23:66.23:0,66,1806	0/0:19,0:19:54.18:0,54,957	0/0:17,0:17:44.99:0,45,768	0/0:40,0:39:99:0,102,1738	0/0:16,0:16:42.14:0,42,773	0/0:25,0:25:75.25:0,75,1283	0/0:23,0:22:60.16:0,60,996	0/0:6,0:6:15.05:0,15,268
chr10	17074045	.	A	ACG	21276.36	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-9.204;DP=640;FS=0.361;HRun=0;HaplotypeScore=95.6378;InbreedingCoeff=0.9956;MQ=85.13;MQ0=1;MQRankSum=-5.782;QD=42.22;ReadPosRankSum=5.894;VQSLOD=6.6627;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,37:39:96.33:1947,96,0	1/1:0,9:11:21.07:425,21,0	0/0:19,0:19:53.20:0,53,815	0/0:24,0:24:63.20:0,63,1008	1/1:0,25:26:57.03:1153,57,0	1/1:25,0:25:44.19:195,44,0	1/1:19,0:19:28.94:88,29,0	0/0:27,0:27:81.24:0,81,1233	1/1:0,19:19:51.18:1035,51,0	1/1:1,22:23:66.12:1250,66,0	1/1:1,15:16:30.10:608,30,0	1/1:0,30:31:87.30:1765,87,0	1/1:1,15:16:30.10:609,30,0	1/1:0,18:18:51.18:1035,51,0	1/1:0,17:20:44.96:913,45,0	1/1:27,0:27:44.12:183,44,0	1/1:1,44:46:99:2252,111,0	1/1:19,0:19:40.26:162,40,0	0/0:20,0:20:60.17:0,60,947	0/0:23,0:23:66.23:0,66,1076	0/0:23,0:23:69.22:0,69,1097	1/1:0,21:21:54.19:1094,54,0	1/1:0,16:17:44.66:912,45,0	1/1:0,38:37:99:2009,99,0	1/1:2,14:18:36.12:730,36,0	1/1:0,26:28:81.23:1547,81,0	1/1:1,19:21:54.18:1070,54,0	1/1:0,6:6:15.05:294,15,0
chr10	17074404	.	CCTT	C	6765.22	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=13.814;DP=686;FS=11.571;HRun=0;HaplotypeScore=120.8986;InbreedingCoeff=0.9900;MQ=81.18;MQ0=0;MQRankSum=-5.792;QD=39.11;ReadPosRankSum=3.152;VQSLOD=5.8874;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,138,3007	1/1:1,9:10:24.08:375,24,0	0/0:17,0:17:40.02:0,40,805	0/0:20,0:20:57.19:0,57,1139	1/1:0,9:9:9.03:144,9,0	0/0:23,0:23:69.24:0,69,1469	0/0:44,0:44:99:0,123,2634	0/0:25,0:25:63.18:0,63,1276	0/0:23,0:23:60.21:0,60,1312	1/1:3,20:23:63.21:987,63,0	1/1:1,10:11:24.08:386,24,0	0/0:30,0:30:84.22:0,84,1803	0/0:23,0:23:63.20:0,63,1304	0/0:28,0:28:78.27:0,78,1673	1/1:0,28:28:69.24:1107,69,0	0/0:27,0:26:81.23:0,81,1611	1/1:3,42:45:99:1611,102,0	0/0:21,0:21:57.20:0,57,1258	0/0:23,0:23:66.20:0,66,1354	0/0:13,0:13:39.13:0,39,860	0/0:69,0:69:99:0,199,4158	0/0:11,0:11:30.10:0,30,615	0/0:18,0:18:42.14:0,42,923	0/0:31,0:31:93.32:0,93,2045	0/0:20,0:20:54.16:0,54,1082	1/1:0,23:23:69.24:1107,69,0	1/1:0,13:13:36.12:567,36,0	1/1:0,11:11:30.10:482,30,0
chr10	17074966	.	C	CAT	2715.28	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-1.299;DP=786;FS=0.396;HRun=0;HaplotypeScore=174.6855;InbreedingCoeff=0.9129;MQ=70.17;MQ0=14;MQRankSum=5.368;QD=13.25;ReadPosRankSum=-2.323;VQSLOD=2.5801;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:77.57:0,78,597	1/1:10,0:10:23.92:214,24,0	0/0:47,0:22:22.08:0,22,413	0/0:65,0:34:54.79:0,55,409	1/1:19,0:19:47.79:370,48,0	0/0:25,0:25:9.22:0,9,262	0/0:29,0:28:54.08:0,54,469	0/0:36,0:36:88.36:0,88,822	0/0:19,0:17:32.76:0,33,248	1/1:2,22:26:69.14:603,69,0	1/1:26,0:26:65.67:551,66,0	0/0:28,0:28:44.92:0,45,366	0/0:28,0:27:66.22:0,66,519	0/0:32,0:32:45.20:0,45,358	1/1:28,0:28:6.02:78,6,0	0/0:24,0:24:37.97:0,38,343	1/1:33,2:34:21.40:349,21,0	0/0:27,0:26:37.94:0,38,360	0/0:21,0:21:37.79:0,38,437	0/0:21,0:21:19.35:0,19,271	0/0:43,0:43:18.21:0,18,629	0/0:12,0:12:26.88:0,27,212	0/0:15,0:15:21.43:0,21,170	0/0:32,0:32:35.85:0,36,281	0/0:28,0:28:68.82:0,69,556	1/1:25,0:25:56.58:656,57,0	1/1:20,0:20:2.77:39,3,0	1/1:2,14:14:3.01:56,3,0
chr10	17074967	.	ATCTCTCTCTCTCTCTCTCTC	A	10311.13	PASS	AB=0.847;AC=18;AF=0.321;AN=56;BaseQRankSum=10.530;DP=833;FS=0.000;HRun=0;HaplotypeScore=349.1110;InbreedingCoeff=0.7781;MQ=68.15;MQ0=15;MQRankSum=-9.303;QD=35.56;ReadPosRankSum=4.483;VQSLOD=2.1715;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:28,21:49:34.66:1199,0,35	0/0:11,0:11:12.04:0,12,928	0/1:47,0:22:33.11:33,0,285	0/0:63,0:32:23.01:0,23,383	0/0:20,0:20:33.11:0,33,2242	0/0:27,0:27:44.17:0,44,3003	0/0:29,0:33:33.58:0,34,1757	0/0:38,0:38:42.79:0,43,2050	1/1:9,9:17:21.07:1012,21,0	0/0:31,0:31:55.72:0,56,3665	0/0:27,0:27:45.14:0,45,3174	1/1:15,13:28:27.09:1422,27,0	1/1:18,8:27:9.69:1362,10,0	1/1:18,14:32:18.06:823,18,0	0/0:6,0:35:8.90:0,9,800	0/0:19,0:28:27.08:0,27,1342	0/0:10,0:39:39.60:0,40,2858	0/0:21,0:32:47.34:0,47,2898	0/0:17,0:22:24.08:0,24,2065	0/0:22,0:25:34.89:0,35,2102	0/0:44,0:44:69.71:0,70,5060	1/1:4,8:12:21.07:961,21,0	1/1:7,6:15:14.96:519,15,0	1/1:15,16:32:20.94:1072,21,0	1/1:11,16:27:39.13:1907,39,0	0/0:25,0:25:57.18:0,57,4259	0/0:2,0:23:6.36:0,6,466	0/0:17,0:15:6.02:0,6,317
chr10	17075252	.	TG	T	3973.76	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=10.183;DP=798;FS=0.778;HRun=3;HaplotypeScore=77.7954;InbreedingCoeff=0.9998;MQ=85.79;MQ0=0;MQRankSum=-1.061;QD=31.79;ReadPosRankSum=1.267;VQSLOD=3.9058;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:60,0:60:99:0,172,2403	0/0:10,0:10:30.10:0,30,432	0/0:28,0:28:72.11:0,72,1012	0/0:25,0:25:63.35:0,63,855	0/0:28,0:28:78.25:0,78,1100	1/1:0,27:27:78.25:967,78,0	1/1:2,33:35:84.26:1042,84,0	0/0:32,0:32:96.32:0,96,1382	0/0:21,0:21:63.21:0,63,896	0/0:29,0:29:84.28:0,84,1198	0/0:23,0:23:65.81:0,66,948	0/0:22,0:22:66.22:0,66,942	0/0:33,0:33:99:0,99,1425	0/0:24,0:24:69.23:0,69,988	0/0:31,0:31:87.28:0,87,1233	1/1:0,30:30:84.26:1041,84,0	0/0:33,0:33:87.29:0,87,1252	1/1:3,30:33:38.08:924,38,0	0/0:18,0:18:48.16:0,48,681	0/0:25,0:25:72.24:0,72,1031	0/0:52,0:52:99:0,153,2184	0/0:27,0:27:75.25:0,75,1072	0/0:22,0:22:66.21:0,66,929	0/0:33,0:33:99:0,99,1426	0/0:28,0:28:78.22:0,78,1067	0/0:33,0:33:93.31:0,93,1339	0/0:21,0:20:63.20:0,63,889	0/0:15,0:15:42.08:0,42,562
chr10	17077391	.	T	TA	12266.49	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-17.852;DP=671;FS=2.019;HRun=1;HaplotypeScore=68.9946;InbreedingCoeff=1.0000;MQ=84.76;MQ0=0;MQRankSum=-8.009;QD=39.70;ReadPosRankSum=3.475;VQSLOD=5.5856;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,24:24:60.20:899,60,0	0/0:11,0:11:33.11:0,33,428	0/0:22,0:22:63.14:0,63,762	0/0:21,0:21:46.47:0,46,618	0/0:27,0:27:81.24:0,81,1021	1/1:0,23:23:60.20:899,60,0	1/1:1,41:42:99:1664,111,0	0/0:28,0:28:77.55:0,78,936	1/1:1,22:23:66.22:989,66,0	0/0:31,0:31:87.28:0,87,1118	0/0:16,0:16:45.12:0,45,567	1/1:0,21:21:63.21:944,63,0	1/1:1,19:20:54.18:808,54,0	1/1:2,23:25:63.17:919,63,0	0/0:16,0:16:48.14:0,48,609	1/1:0,21:21:54.18:809,54,0	0/0:27,0:27:81.23:0,81,1021	1/1:0,17:17:48.16:719,48,0	0/0:19,0:19:54.17:0,54,686	0/0:22,0:22:66.18:0,66,838	0/0:34,0:34:93.26:0,93,1175	1/1:1,21:22:63.04:874,63,0	1/1:0,15:15:42.14:629,42,0	1/1:0,33:33:87.29:1303,87,0	1/1:1,22:23:54.18:809,54,0	0/0:29,0:29:81.25:0,81,1028	0/0:33,0:33:96.30:0,96,1233	0/0:26,0:26:78.25:0,78,1008
chr10	17081111	.	A	ACCCTG	15574.32	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-12.159;DP=788;FS=17.055;HRun=0;HaplotypeScore=136.4010;InbreedingCoeff=0.9969;MQ=84.12;MQ0=0;MQRankSum=-7.791;QD=70.47;ReadPosRankSum=0.330;VQSLOD=5.1659;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,132,2699	1/1:2,11:13:36.12:1111,36,0	0/0:29,0:30:21.22:0,21,1307	0/0:30,0:30:84.65:0,85,1664	1/1:7,16:24:42.14:1207,42,0	0/0:20,0:20:57.20:0,57,1181	0/0:29,0:29:87.30:0,87,1808	0/0:39,0:39:99:0,105,2100	0/0:34,0:34:90.31:0,90,1889	1/1:4,27:32:93.30:2695,93,0	1/1:1,18:20:51.18:1574,51,0	0/0:38,0:38:99:0,111,2272	0/0:28,0:28:75.24:0,75,1535	0/0:24,0:24:63.22:0,63,1259	1/1:9,42:54:99:3624,126,0	0/0:36,0:36:99:0,105,2118	1/1:4,18:23:48.16:1415,48,0	0/0:18,0:18:48.16:0,48,983	0/0:31,0:31:78.27:0,78,1624	0/0:21,0:21:60.21:0,60,1231	0/0:59,0:59:99:0,163,3332	0/0:23,0:23:63.22:0,63,1295	0/0:13,0:13:36.12:0,36,756	0/0:20,0:20:60.16:0,60,1215	0/0:25,0:25:72.25:0,72,1512	1/1:0,25:26:78.22:2185,78,0	1/1:3,17:22:41.97:1299,42,0	1/1:0,7:7:15.05:464,15,0
chr10	17082279	.	G	GC	6891.59	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-10.588;DP=590;FS=2.904;HRun=2;HaplotypeScore=54.0174;InbreedingCoeff=0.9897;MQ=81.52;MQ0=0;MQRankSum=-1.544;QD=40.07;ReadPosRankSum=0.140;VQSLOD=5.0346;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,123,1510	1/1:0,11:11:33.11:475,33,0	0/0:12,0:12:30.07:0,30,357	0/0:18,0:18:51.16:0,51,629	1/1:0,15:15:42.14:605,42,0	0/0:16,0:16:48.14:0,48,582	0/0:24,0:24:69.20:0,69,842	0/0:29,0:29:84.25:0,84,1022	0/0:23,0:23:66.21:0,66,818	1/1:0,24:24:72.24:1037,72,0	1/1:1,12:13:36.12:518,36,0	0/0:28,0:28:84.26:0,84,1041	0/0:27,0:28:77.44:0,77,923	0/0:23,0:23:69.22:0,69,855	1/1:2,23:25:66.22:950,66,0	0/0:28,0:28:84.25:0,84,1030	1/1:2,24:26:69.23:994,69,0	0/0:8,0:8:24.08:0,24,298	0/0:16,0:16:42.13:0,42,521	0/0:13,0:13:33.10:0,33,409	0/0:43,0:43:99:0,123,1524	0/0:14,0:14:39.12:0,39,483	0/0:7,0:7:21.07:0,21,260	0/0:34,0:34:99:0,102,1250	0/0:13,0:13:39.12:0,39,484	1/1:0,17:17:51.17:732,51,0	1/1:2,35:35:99:1452,102,0	1/1:0,4:4:9.03:130,9,0
chr10	17082599	.	TG	T	13297.25	PASS	AB=0.745;AC=54;AF=0.964;AN=56;BaseQRankSum=-5.046;DP=514;FS=4.791;HRun=5;HaplotypeScore=60.1345;InbreedingCoeff=-0.0388;MQ=84.03;MQ0=0;MQRankSum=-4.986;QD=25.87;ReadPosRankSum=3.502;VQSLOD=4.6105;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,30:32:72.20:817,72,0	1/1:0,8:8:24.07:272,24,0	0/1:11,8:18:10.61:242,0,11	0/1:15,5:17:99:118,0,127	1/1:2,10:12:27.08:306,27,0	1/1:1,20:21:48.14:544,48,0	1/1:1,24:25:63.18:715,63,0	1/1:1,15:16:39.10:435,39,0	1/1:1,9:10:24.07:272,24,0	1/1:0,21:21:60.17:674,60,0	1/1:0,13:13:15.04:170,15,0	1/1:0,25:25:66.19:748,66,0	1/1:1,12:13:33.09:374,33,0	1/1:0,21:21:51.15:578,51,0	1/1:0,16:16:45.13:511,45,0	1/1:3,12:15:33.09:374,33,0	1/1:1,33:34:87.25:987,87,0	1/1:3,26:29:69.20:783,69,0	1/1:2,15:17:48.12:535,48,0	1/1:0,14:14:33.09:374,33,0	1/1:7,28:35:78.22:885,78,0	1/1:2,10:12:27.08:306,27,0	1/1:1,5:6:12.03:136,12,0	1/1:0,22:22:51.15:578,51,0	1/1:0,12:12:21.06:238,21,0	1/1:0,15:15:42.12:476,42,0	1/1:4,22:26:63.18:715,63,0	1/1:0,4:4:12.03:136,12,0
chr10	17087560	.	GAGGA	G	3196.23	PASS	AC=16;AF=0.296;AN=54;BaseQRankSum=10.474;DP=646;FS=56.298;HRun=0;HaplotypeScore=115.5203;InbreedingCoeff=0.9402;MQ=77.12;MQ0=0;MQRankSum=-4.061;QD=42.62;ReadPosRankSum=5.002;VQSLOD=1.7532;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:56:99:0,156,3907	1/1:0,1:1:3.01:57,3,0	0/0:23,0:23:61.66:0,62,1256	0/0:31,0:31:72.40:0,72,1598	1/1:1,4:5:9.03:171,9,0	0/0:28,0:28:81.28:0,81,2131	0/0:34,0:34:99:0,99,2583	0/0:25,0:25:72.24:0,72,1838	0/0:31,0:31:93.28:0,93,2227	1/1:0,7:7:21.07:399,21,0	1/1:0,5:5:6.02:114,6,0	0/0:21,0:21:57.18:0,57,1420	0/0:24,0:24:72.23:0,72,1845	0/0:33,0:33:93.32:0,93,2479	1/1:0,15:15:36.12:683,36,0	0/0:24,0:24:72.22:0,72,1734	1/1:0,10:10:24.08:455,24,0	0/0:26,0:26:72.25:0,72,1888	0/0:19,0:19:57.19:0,57,1348	0/0:26,0:26:78.25:0,78,1938	0/0:59,0:59:99:0,175,4401	0/0:27,0:27:75.26:0,75,1963	0/0:15,0:15:42.13:0,42,979	0/0:39,0:38:99:0,114,2835	0/0:29,0:29:87.26:0,87,2143	1/1:1,11:12:33.07:543,33,0	1/1:2,18:20:51.17:967,51,0	./.
chr10	17090455	.	TCAACCAACCAACCAAC	T	9804.57	PASS	AB=0.693;AC=35;AF=0.625;AN=56;BaseQRankSum=5.958;DP=845;FS=0.506;HRun=0;HaplotypeScore=328.7637;InbreedingCoeff=0.2032;MQ=59.00;MQ0=5;MQRankSum=-9.448;QD=14.42;ReadPosRankSum=1.416;VQSLOD=2.9482;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:22,29:51:15.05:448,15,0	1/1:1,10:11:6.08:278,6,0	0/0:35,0:30:6:0,6,57	0/0:25,0:19:0:0,0,0	0/1:24,0:27:37.17:37,0,188	0/1:8,0:22:9.87:111,0,10	0/1:17,0:35:22.88:23,0,39	0/0:16,0:14:14.71:0,15,269	1/1:13,16:29:9.03:394,9,0	0/1:19,0:25:97.47:97,0,192	0/1:11,0:21:54.83:55,0,169	1/1:14,22:36:42.14:1824,42,0	1/1:14,33:47:41.86:1709,42,0	1/1:14,24:38:30.10:1298,30,0	0/1:16,0:43:43.85:167,0,44	1/1:18,0:44:29.27:441,29,0	0/1:19,0:36:48.87:49,0,101	0/1:14,0:23:7.16:82,0,7	0/0:23,0:27:26.29:0,26,1209	0/0:11,0:20:27.09:0,27,1249	0/0:23,0:42:42.13:0,42,2386	1/1:12,18:29:29.42:925,29,0	1/1:11,14:25:14.67:527,15,0	1/1:23,17:41:5.92:262,6,0	1/1:5,16:21:11.77:509,12,0	0/1:12,0:34:99:225,0,240	1/1:14,0:31:2.53:230,3,0	1/1:2,0:8:12:115,12,0
chr10	17091184	.	TCCCAGC	T	10626.09	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=16.854;DP=665;FS=0.337;HRun=0;HaplotypeScore=161.2681;InbreedingCoeff=0.9990;MQ=83.31;MQ0=0;MQRankSum=-18.237;QD=57.13;ReadPosRankSum=3.768;VQSLOD=4.8777;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:99:0,99,3431	1/1:0,11:11:33.11:767,33,0	0/0:27,0:27:69.23:0,69,2168	0/0:22,0:22:57.19:0,57,1587	1/1:1,21:23:48.16:1116,48,0	0/0:15,0:15:45.15:0,45,1514	0/0:20,0:20:60.21:0,60,2076	0/0:16,0:16:39.13:0,39,1331	0/0:29,0:29:84.29:0,84,2994	1/1:2,17:19:51.18:1205,51,0	1/1:0,11:11:27.09:637,27,0	0/0:40,0:40:99:0,114,3914	0/0:39,0:39:99:0,117,4031	0/0:30,0:30:87.30:0,87,3021	1/1:2,32:34:84.29:1970,84,0	0/0:27,0:27:72.25:0,72,2478	1/1:4,20:24:45.15:1048,45,0	0/0:25,0:25:75.26:0,75,2551	0/0:17,0:17:48.16:0,48,1635	0/0:9,0:9:27.09:0,27,951	0/0:42,0:42:99:0,123,4309	0/0:20,0:20:57.20:0,57,2029	0/0:13,0:13:36.12:0,36,1204	0/0:37,0:37:99:0,111,3829	0/0:18,0:18:48.14:0,48,1577	1/1:0,32:32:90.28:2054,90,0	1/1:2,23:25:57.20:1333,57,0	1/1:0,7:7:21.07:496,21,0
chr10	17091484	.	TG	T	2936.50	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=8.947;DP=763;FS=0.000;HRun=5;HaplotypeScore=77.2532;InbreedingCoeff=0.9989;MQ=89.66;MQ0=0;MQRankSum=-1.252;QD=26.70;ReadPosRankSum=1.839;VQSLOD=3.6014;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:56:99:0,166,2255	0/0:19,0:19:51.13:0,51,663	0/0:35,0:35:78.19:0,78,1081	0/0:28,0:27:60.14:0,60,766	0/0:26,0:26:72.23:0,72,955	1/1:1,21:22:48.14:544,48,0	1/1:1,24:25:57.16:647,57,0	0/0:31,0:31:81.25:0,81,1078	0/0:21,0:21:60.18:0,60,804	0/0:29,0:29:78.26:0,78,1062	0/0:18,0:18:54.18:0,54,735	0/0:31,0:31:90.27:0,90,1186	0/0:29,0:29:84.27:0,84,1132	0/0:33,0:33:96.31:0,96,1299	0/0:31,0:31:93.30:0,93,1255	1/1:2,33:35:93.26:1055,93,0	0/0:22,0:22:63.18:0,63,843	1/1:2,26:28:75.21:851,75,0	0/0:15,0:15:45.14:0,45,600	0/0:22,0:22:60.19:0,60,805	0/0:35,0:35:99:0,105,1420	0/0:26,0:26:75.20:0,75,975	0/0:17,0:17:51.17:0,51,691	0/0:36,0:36:99:0,108,1461	0/0:20,0:20:60.20:0,60,821	0/0:33,0:33:99:0,99,1353	0/0:31,0:31:90.29:0,90,1205	0/0:9,0:9:21.07:0,21,287
chr10	17091700	.	AC	A	6185.27	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=18.575;DP=678;FS=0.000;HRun=3;HaplotypeScore=99.3927;InbreedingCoeff=0.9951;MQ=86.89;MQ0=0;MQRankSum=-8.767;QD=33.99;ReadPosRankSum=3.776;VQSLOD=4.9139;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:84.28:0,84,1208	1/1:0,10:10:30.09:371,30,0	0/0:19,0:19:57.14:0,57,779	0/0:30,0:30:81.19:0,81,1074	1/1:3,20:22:51.16:631,51,0	0/0:36,0:36:99:0,105,1500	0/0:32,0:32:96.31:0,96,1363	0/0:29,0:29:81.25:0,81,1118	0/0:19,0:19:57.19:0,57,818	1/1:3,22:24:69.22:855,69,0	1/1:0,14:14:42.13:519,42,0	0/0:21,0:21:63.21:0,63,907	0/0:34,0:34:99:0,102,1443	0/0:23,0:23:66.22:0,66,950	1/1:2,26:28:81.25:1003,81,0	0/0:32,0:32:93.30:0,93,1317	1/1:2,23:25:69.22:854,69,0	0/0:23,0:23:69.21:0,69,968	0/0:25,0:25:66.22:0,66,949	0/0:29,0:29:84.28:0,84,1206	0/0:30,0:30:90.30:0,90,1294	0/0:24,0:24:72.24:0,72,1037	0/0:27,0:27:78.26:0,78,1122	0/0:16,0:16:48.16:0,48,691	0/0:17,0:17:45.15:0,45,648	1/1:2,25:27:78.24:966,78,0	1/1:1,24:25:69.12:838,69,0	1/1:1,4:5:12.04:149,12,0
chr10	17091746	.	TC	T	6248.53	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=18.860;DP=650;FS=12.256;HRun=2;HaplotypeScore=105.4655;InbreedingCoeff=0.9984;MQ=83.31;MQ0=0;MQRankSum=-10.365;QD=34.52;ReadPosRankSum=0.428;VQSLOD=3.5834;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,102,1503	1/1:0,8:8:24.08:310,24,0	0/0:21,0:21:54.57:0,55,683	0/0:20,0:20:54.03:0,54,654	1/1:4,13:17:48.13:581,48,0	0/0:30,0:30:90.28:0,90,1304	0/0:32,0:32:96.30:0,96,1397	0/0:31,0:31:93.26:0,93,1301	0/0:24,0:24:72.22:0,72,1038	1/1:4,16:20:60.14:728,60,0	1/1:5,17:22:62.99:729,63,0	0/0:24,0:24:72.23:0,72,1042	0/0:28,0:28:84.17:0,84,1174	0/0:23,0:23:63.15:0,63,840	1/1:6,24:30:81.20:978,81,0	0/0:23,0:23:65.12:0,65,879	1/1:3,18:21:54.09:662,54,0	0/0:17,0:17:51.12:0,51,719	0/0:26,0:26:78.17:0,78,1039	0/0:26,0:26:75.24:0,75,1094	0/0:24,0:24:69.18:0,69,953	0/0:23,0:23:66.18:0,66,940	0/0:30,0:30:81.21:0,81,1109	0/0:16,0:16:48.10:0,48,655	0/0:17,0:17:45.13:0,45,634	1/1:4,23:27:81.21:991,81,0	1/1:4,25:29:84.24:1036,84,0	1/1:0,7:7:18.06:232,18,0
chr10	17092077	.	A	ACTATCTAT	2483.43	PASS	AB=0.727;AC=20;AF=0.667;AN=30;BaseQRankSum=-4.681;DP=432;FS=1.116;HRun=0;HaplotypeScore=178.0554;InbreedingCoeff=0.4135;MQ=65.58;MQ0=1;MQRankSum=1.930;QD=9.13;ReadPosRankSum=-1.913;VQSLOD=2.6296;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:28:18.42:220,18,0	./.	./.	./.	./.	0/0:15,0:23:9.01:0,9,135	./.	./.	0/1:13,0:21:70.11:132,0,70	./.	./.	1/1:16,8:25:15.05:603,15,0	1/1:26,12:40:11.79:274,12,0	1/1:22,0:22:3.01:77,3,0	./.	0/0:10,0:17:12.04:0,12,223	./.	0/0:8,0:13:4.63:0,5,254	1/1:27,0:27:12.03:268,12,0	1/1:19,4:26:6.02:240,6,0	1/1:27,0:27:15:299,15,0	0/1:12,0:19:63.96:136,0,64	1/1:10,7:19:3.48:122,3,0	1/1:15,3:18:6.02:238,6,0	0/0:9,0:17:3.01:0,3,35	./.	./.	./.
chr10	17092980	.	A	AG	10721.70	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=3.091;DP=823;FS=7.405;HRun=0;HaplotypeScore=85.5010;InbreedingCoeff=0.9999;MQ=84.29;MQ0=0;MQRankSum=-1.949;QD=44.49;ReadPosRankSum=3.050;VQSLOD=5.0771;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,135,1868	1/1:0,13:13:39.13:609,39,0	0/0:26,0:26:78.26:0,78,1076	0/0:24,0:25:39.98:0,40,738	1/1:1,23:24:66.22:1054,66,0	0/0:20,0:20:60.20:0,60,838	0/0:42,0:42:99:0,126,1743	0/0:23,0:23:66.20:0,66,905	0/0:39,0:39:99:0,117,1636	1/1:1,28:29:84.27:1319,84,0	1/1:0,19:19:51.17:815,51,0	0/0:37,0:37:99:0,108,1493	0/0:31,0:31:93.27:0,93,1269	0/0:33,0:33:93.31:0,93,1297	1/1:0,37:37:99:1631,102,0	0/0:32,0:32:96.32:0,96,1342	1/1:0,32:32:90.31:1439,90,0	0/0:34,0:34:96.32:0,96,1343	0/0:16,0:16:45.12:0,45,594	0/0:30,0:30:90.30:0,90,1259	0/0:39,0:39:99:0,111,1552	0/0:25,0:25:75.25:0,75,1045	0/0:18,0:18:51.17:0,51,713	0/0:41,0:41:99:0,123,1678	0/0:26,0:26:78.23:0,78,1054	1/1:0,39:39:99:1849,117,0	1/1:0,31:31:93.32:1478,93,0	1/1:0,16:16:33.11:528,33,0
chr10	17093473	.	T	TC	9853.36	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-16.280;DP=791;FS=0.926;HRun=0;HaplotypeScore=69.7049;InbreedingCoeff=0.9997;MQ=84.61;MQ0=0;MQRankSum=-8.149;QD=42.84;ReadPosRankSum=2.763;VQSLOD=5.5529;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:64,0:64:99:0,193,2641	1/1:0,11:11:33.11:526,33,0	0/0:35,0:35:95.47:0,95,1302	0/0:24,0:23:63.18:0,63,867	1/1:0,19:19:48.16:766,48,0	0/0:26,0:26:78.25:0,78,1075	0/0:35,0:35:99:0,102,1409	0/0:29,0:29:87.27:0,87,1174	0/0:25,0:25:75.23:0,75,1018	1/1:2,24:26:30.35:991,30,0	1/1:0,17:17:45.15:707,45,0	0/0:22,0:22:66.22:0,66,922	0/0:20,0:20:60.17:0,60,817	0/0:34,0:34:99:0,102,1396	1/1:0,44:45:99:1952,123,0	0/0:28,0:28:84.24:0,84,1123	1/1:1,33:34:93.32:1486,93,0	0/0:37,0:37:99:0,111,1527	0/0:19,0:19:57.17:0,57,768	0/0:28,0:28:84.27:0,84,1151	0/0:44,0:44:99:0,129,1749	0/0:18,0:18:54.14:0,54,733	0/0:17,0:17:51.16:0,51,695	0/0:33,0:33:99:0,99,1382	0/0:23,0:23:69.23:0,69,964	1/1:1,36:37:99:1701,108,0	1/1:0,32:32:81.28:1294,81,0	1/1:0,9:9:27.09:431,27,0
chr10	17094613	.	CAGGCTTCG	C	5559.08	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=11.534;DP=756;FS=7.028;HRun=0;HaplotypeScore=193.8245;InbreedingCoeff=0.9988;MQ=87.50;MQ0=0;MQRankSum=-13.101;QD=53.97;ReadPosRankSum=0.914;VQSLOD=4.1963;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,126,5157	0/0:12,0:12:36.12:0,36,1595	0/0:26,0:26:72.24:0,72,2818	0/0:30,0:30:77.64:0,78,2674	0/0:25,0:25:72.25:0,72,2912	1/1:2,20:22:45.15:1265,45,0	1/1:1,27:28:57.19:1549,57,0	0/0:38,0:38:99:0,111,4572	0/0:31,0:31:90.31:0,90,3898	0/0:30,0:30:90.31:0,90,3875	0/0:20,0:20:60.21:0,60,2555	0/0:28,0:28:81.28:0,81,3487	0/0:26,0:26:75.26:0,75,3195	0/0:30,0:30:75.26:0,75,3132	0/0:31,0:31:90.30:0,90,3600	1/1:2,21:23:45.15:1273,45,0	0/0:40,0:40:99:0,120,5042	1/1:2,28:30:54.18:1472,54,0	0/0:25,0:25:63.22:0,63,2153	0/0:25,0:25:72.25:0,72,3010	0/0:29,0:29:81.28:0,81,3501	0/0:26,0:26:75.26:0,75,3190	0/0:15,0:15:45.14:0,45,1803	0/0:41,0:41:99:0,117,5073	0/0:29,0:29:84.27:0,84,3254	0/0:24,0:24:72.25:0,72,2783	0/0:20,0:20:57.20:0,57,2407	0/0:7,0:7:21.07:0,21,838
chr10	17095960	.	AAATG	A	6812.32	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=16.512;DP=601;FS=30.030;HRun=0;HaplotypeScore=143.3233;InbreedingCoeff=0.9893;MQ=93.70;MQ0=0;MQRankSum=-15.972;QD=53.22;ReadPosRankSum=2.390;VQSLOD=3.5502;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,141,3927	1/1:0,8:8:24.08:464,24,0	0/0:37,0:37:99:0,108,2857	0/0:21,0:21:60.18:0,60,1591	1/1:1,17:18:48.08:821,48,0	0/0:16,0:16:48.16:0,48,1368	0/0:20,0:20:60.21:0,60,1701	0/0:25,0:25:75.26:0,75,2174	0/0:18,0:18:54.19:0,54,1564	1/1:0,15:15:39.11:753,39,0	1/1:0,4:4:9.03:174,9,0	0/0:24,0:24:72.25:0,72,2087	0/0:25,0:25:75.26:0,75,2173	0/0:23,0:23:69.24:0,69,1920	1/1:0,14:14:42.14:814,42,0	0/0:18,0:18:54.19:0,54,1565	1/1:1,21:22:60.13:1087,60,0	0/0:22,0:22:66.23:0,66,1913	0/0:28,0:28:81.28:0,81,2314	0/0:21,0:21:63.22:0,63,1781	0/0:41,0:41:99:0,123,3526	0/0:23,0:23:69.24:0,69,1963	0/0:15,0:15:45.15:0,45,1226	0/0:31,0:31:93.32:0,93,2634	0/0:18,0:18:54.16:0,54,1484	1/1:2,21:23:69.24:1314,69,0	1/1:1,17:18:54.19:1034,54,0	1/1:0,6:6:18.06:352,18,0
chr10	17095967	.	TTGC	T	3840.69	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=16.530;DP=604;FS=26.215;HRun=0;HaplotypeScore=141.0451;InbreedingCoeff=0.9892;MQ=94.64;MQ0=0;MQRankSum=-16.201;QD=30.97;ReadPosRankSum=3.695;VQSLOD=2.3073;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,132,3166	1/1:0,8:8:24.07:265,24,0	0/0:40,0:40:99:0,114,2530	0/0:20,0:20:57.19:0,57,1233	1/1:0,16:16:44.28:458,44,0	0/0:14,0:14:42.14:0,42,1009	0/0:20,0:20:60.19:0,60,1428	0/0:28,0:28:84.29:0,84,2032	0/0:18,0:18:54.19:0,54,1331	1/1:0,15:15:38.41:439,38,0	1/1:0,4:4:9.02:98,9,0	0/0:28,0:28:84.29:0,84,2040	0/0:27,0:27:81.27:0,81,1923	0/0:21,0:21:63.20:0,63,1453	1/1:0,14:14:42.12:467,42,0	0/0:19,0:19:57.20:0,57,1403	1/1:1,21:22:54.15:601,54,0	0/0:23,0:23:69.19:0,69,1620	0/0:28,0:28:81.26:0,81,1845	0/0:23,0:23:69.22:0,69,1584	0/0:43,0:43:99:0,129,3114	0/0:23,0:23:69.23:0,69,1652	0/0:14,0:14:42.14:0,42,1009	0/0:29,0:29:87.30:0,87,2137	0/0:18,0:18:54.19:0,54,1331	1/1:1,21:22:64.73:720,65,0	1/1:1,16:17:51.15:587,51,0	1/1:0,6:6:18.05:206,18,0
chr10	17095971	.	AT	A	2430.25	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=16.785;DP=602;FS=25.661;HRun=1;HaplotypeScore=120.6938;InbreedingCoeff=0.9890;MQ=93.65;MQ0=1;MQRankSum=-15.817;QD=18.99;ReadPosRankSum=2.880;VQSLOD=2.4840;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,132,2080	1/1:0,8:8:23.85:173,24,0	0/0:38,0:38:95.43:0,95,1601	0/0:20,0:20:60.14:0,60,856	1/1:1,16:17:45.78:312,46,0	0/0:15,0:15:45.15:0,45,714	0/0:19,0:19:57.19:0,57,908	0/0:30,0:30:90.29:0,90,1394	0/0:18,0:18:54.18:0,54,862	1/1:1,15:16:41.71:320,42,0	1/1:0,4:4:8.93:62,9,0	0/0:29,0:29:87.28:0,87,1361	0/0:26,0:26:78.25:0,78,1223	0/0:19,0:19:57.19:0,57,903	1/1:1,14:15:44.75:329,45,0	0/0:19,0:19:57.17:0,57,886	1/1:0,21:21:53.62:387,54,0	0/0:22,0:22:66.22:0,66,1045	0/0:27,0:27:78.25:0,78,1208	0/0:21,0:21:63.21:0,63,1003	0/0:43,0:43:99:0,129,2030	0/0:22,0:22:66.22:0,66,1050	0/0:15,0:15:45.15:0,45,717	0/0:29,0:29:87.24:0,87,1336	0/0:18,0:18:54.18:0,54,862	1/1:1,23:23:68.80:539,69,0	1/1:0,17:17:50.76:388,51,0	1/1:1,5:6:17.90:132,18,0
chr10	17098437	.	T	TA	9783.68	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-15.167;DP=655;FS=9.541;HRun=6;HaplotypeScore=62.8483;InbreedingCoeff=0.9976;MQ=83.70;MQ0=0;MQRankSum=-1.938;QD=33.05;ReadPosRankSum=1.492;VQSLOD=4.7389;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,138,1400	1/1:1,11:12:33.11:415,33,0	0/0:19,0:19:45.07:0,45,445	0/0:18,0:19:42.54:0,43,413	1/1:2,18:20:54.17:679,54,0	1/1:0,23:23:69.22:868,69,0	1/1:4,23:27:66.18:814,66,0	0/0:27,0:27:72.15:0,72,734	0/0:17,0:17:51.09:0,51,512	1/1:2,26:28:72.22:894,72,0	1/1:0,12:12:33.11:415,33,0	0/0:26,0:26:72.14:0,72,726	0/0:27,0:27:78.17:0,78,796	0/0:20,0:20:54.12:0,54,551	1/1:1,24:25:69.19:852,69,0	1/1:0,15:15:39.12:491,39,0	1/1:2,30:32:78.25:981,78,0	1/1:2,31:33:87.28:1094,87,0	0/0:24,0:24:60.12:0,60,611	0/0:9,0:9:27.06:0,27,275	0/0:38,0:38:99:0,108,1094	0/0:23,0:23:63.14:0,63,643	0/0:16,0:16:39.08:0,39,397	0/0:27,0:27:72.10:0,72,715	0/0:19,0:19:51.12:0,51,520	1/1:4,25:29:47.59:884,48,0	1/1:1,34:35:96.31:1208,96,0	1/1:0,5:5:15.05:189,15,0
chr10	17098640	.	C	CA	3180.20	PASS	AB=0.714;AC=17;AF=0.304;AN=56;BaseQRankSum=-4.189;DP=586;FS=1.318;HRun=8;HaplotypeScore=83.3071;InbreedingCoeff=0.9080;MQ=82.14;MQ0=0;MQRankSum=-1.064;QD=24.46;ReadPosRankSum=-1.812;VQSLOD=3.5718;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:29:53.11:0,53,567	0/1:3,2:5:7:60,0,7	0/0:20,0:20:23.02:0,23,292	0/0:21,0:21:38.08:0,38,349	1/1:5,4:10:11.99:124,12,0	0/0:18,0:18:45:0,45,407	0/0:22,0:22:54.01:0,54,493	0/0:25,0:25:54.01:0,54,488	0/0:25,0:25:66.02:0,66,604	1/1:3,14:18:20.67:480,21,0	1/1:1,6:7:15.04:173,15,0	0/0:23,0:23:57.01:0,57,521	0/0:23,0:23:54:0,54,490	0/0:34,0:34:83.99:0,84,759	1/1:3,6:9:9.03:104,9,0	0/0:18,0:18:41.99:0,42,379	1/1:2,21:23:60.18:692,60,0	0/0:38,0:40:99:0,101,898	0/0:12,0:12:24.01:0,24,220	0/0:9,0:9:17.74:0,18,149	0/0:48,0:48:99:0,110,997	0/0:13,0:13:24:0,24,220	0/0:7,0:7:18.01:0,18,165	0/0:51,0:51:99:0,135,1226	0/0:18,0:18:47.99:0,48,430	1/1:3,24:27:72.21:831,72,0	1/1:1,18:19:48.11:540,48,0	1/1:0,12:12:33.10:381,33,0
chr10	17099520	.	CGG	C	8809.05	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=14.835;DP=732;FS=3.029;HRun=3;HaplotypeScore=135.5719;InbreedingCoeff=0.9826;MQ=80.37;MQ0=1;MQRankSum=-4.798;QD=39.68;ReadPosRankSum=4.594;VQSLOD=4.3126;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,114,2161	1/1:0,7:7:6.02:92,6,0	0/0:21,0:21:63.20:0,63,1089	0/0:17,0:17:41.83:0,42,674	1/1:0,18:18:48.16:734,48,0	0/0:16,0:16:45.15:0,45,852	0/0:35,0:35:99:0,105,1937	0/0:25,0:25:72.23:0,72,1315	0/0:26,0:26:78.27:0,78,1507	1/1:0,23:23:63.21:964,63,0	1/1:0,12:12:30.10:459,30,0	0/0:33,0:33:96.33:0,96,1854	0/0:34,0:34:99:0,99,1893	0/0:39,0:39:99:0,117,2195	1/1:0,48:48:99:1837,120,0	0/0:24,0:24:72.25:0,72,1391	1/1:1,49:50:99:1974,129,0	0/0:30,0:30:90.27:0,90,1689	0/0:17,0:17:48.16:0,48,920	0/0:9,0:9:27.09:0,27,515	0/0:50,0:50:99:0,147,2795	0/0:15,0:15:45.15:0,45,868	0/0:20,0:20:54.18:0,54,1031	0/0:44,0:44:99:0,132,2472	0/0:17,0:17:51.17:0,51,937	1/1:0,32:31:93.29:1373,93,0	1/1:0,25:25:69.23:1055,69,0	1/1:0,7:7:21.07:321,21,0
chr10	17099760	.	TGTTGGCTCCTG	T	13557.83	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=16.689;DP=658;FS=0.749;HRun=0;HaplotypeScore=249.2369;InbreedingCoeff=0.9817;MQ=85.19;MQ0=0;MQRankSum=-16.856;QD=86.91;ReadPosRankSum=5.191;VQSLOD=4.7144;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,135,6942	1/1:1,11:12:33.11:1196,33,0	0/0:21,0:21:60.15:0,60,3046	0/0:27,0:27:73.13:0,73,3407	1/1:3,11:14:30.10:1014,30,0	0/0:23,0:23:69.24:0,69,4022	0/0:28,0:28:84.27:0,84,4446	0/0:33,0:33:87.27:0,87,4284	0/0:19,0:19:57.20:0,57,3070	1/1:3,26:29:72.25:2609,72,0	1/1:1,6:7:18.06:652,18,0	0/0:30,0:30:87.28:0,87,4815	0/0:34,0:34:96.33:0,96,5324	0/0:30,0:30:90.31:0,90,4905	1/1:5,26:31:69.24:2499,69,0	0/0:31,0:31:93.32:0,93,5296	1/1:4,13:17:39.13:1413,39,0	0/0:22,0:22:66.23:0,66,3708	0/0:10,0:10:30.10:0,30,1600	0/0:9,0:9:24.08:0,24,1253	0/0:62,0:62:99:0,187,10004	0/0:14,0:14:42.14:0,42,2420	0/0:12,0:12:36.12:0,36,2067	0/0:32,0:32:96.33:0,96,5499	0/0:20,0:20:57.20:0,57,3189	1/1:3,19:22:60.21:2109,60,0	1/1:5,16:21:51.18:1848,51,0	1/1:0,3:3:6.02:217,6,0
chr10	17100234	.	AC	A	2135.39	PASS	AB=0.908;AC=26;AF=0.481;AN=54;BaseQRankSum=-7.474;DP=402;FS=10.948;HRun=11;HaplotypeScore=73.6411;InbreedingCoeff=0.3151;MQ=82.35;MQ0=0;MQRankSum=1.847;QD=7.36;ReadPosRankSum=0.101;VQSLOD=1.0514;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:17,5:23:9.71:94,0,10	0/0:5,0:5:7.79:0,8,29	0/1:23,0:21:3.63:4,0,192	0/1:14,0:13:12.84:13,0,84	0/0:6,0:6:7.29:0,7,28	1/1:7,0:7:2.98:25,3,0	1/1:8,25:33:70.94:572,71,0	0/1:16,1:17:12.64:13,0,73	1/1:3,8:11:20.25:169,20,0	0/1:11,0:13:10.01:10,0,48	0/0:2,0:2:2.50:0,2,9	1/1:10,3:14:22.93:172,23,0	1/1:13,3:16:17.89:139,18,0	1/1:10,1:11:5.94:49,6,0	0/0:24,0:25:43.72:0,44,165	1/1:5,8:14:27.26:191,27,0	0/0:35,0:40:24.10:0,24,181	1/1:13,19:33:73.86:591,74,0	0/1:8,1:9:12.62:13,0,80	0/0:3,0:3:5.99:0,6,48	0/1:23,2:25:1.63:2,0,360	./.	0/0:2,0:2:0:0,0,0	1/1:8,14:22:29.82:246,30,0	0/0:3,0:3:0:0,0,0	0/0:15,0:17:4.20:0,4,56	0/1:4,0:5:5.85:6,0,19	0/0:7,0:7:7.59:0,8,28
chr10	17100242	.	C	CA	2668.25	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=8.922;DP=401;FS=11.232;HRun=0;HaplotypeScore=75.5114;InbreedingCoeff=0.8504;MQ=89.07;MQ0=0;MQRankSum=-2.452;QD=25.91;ReadPosRankSum=7.165;VQSLOD=3.5500;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:59.54:0,60,465	1/1:0,4:4:9.03:110,9,0	0/0:25,0:23:34.92:0,35,522	0/0:20,0:19:34.98:0,35,338	1/1:0,6:6:9.03:113,9,0	0/0:6,0:6:11.95:0,12,95	0/0:37,0:37:97.87:0,98,679	0/0:18,0:18:35.91:0,36,320	0/0:13,0:13:30.89:0,31,201	1/1:3,10:13:31.39:364,31,0	1/1:0,1:1:3.01:38,3,0	0/0:13,0:13:32.36:0,32,214	0/0:12,0:12:32.72:0,33,238	0/0:13,0:13:26.83:0,27,210	1/1:1,22:23:51.15:644,51,0	0/0:14,0:14:35.44:0,35,231	1/1:6,28:34:81.06:938,81,0	0/0:34,0:34:94.87:0,95,650	0/0:8,0:8:17.95:0,18,187	0/0:2,0:2:3:0,3,26	0/0:25,0:25:56.87:0,57,608	0/0:3,0:3:5.97:0,6,47	0/0:3,0:3:3.68:0,4,15	0/0:29,0:29:62.56:0,63,473	0/0:2,0:2:5.90:0,6,40	1/1:3,10:13:19.91:398,20,0	1/1:1,3:4:12.04:148,12,0	1/1:0,5:5:9.03:113,9,0
chr10	17101068	.	T	TTTTGTTTG	6939.90	PASS	AC=34;AF=0.630;AN=54;BaseQRankSum=-0.994;DP=447;FS=11.685;HRun=0;HaplotypeScore=118.1145;InbreedingCoeff=0.9223;MQ=65.93;MQ0=4;MQRankSum=-2.639;QD=28.44;ReadPosRankSum=3.458;VQSLOD=4.0331;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:51:83.83:696,84,0	./.	0/0:27,0:17:12.04:0,12,223	0/0:22,0:18:24.03:0,24,375	1/1:5,3:8:9.03:294,9,0	0/0:1,0:12:27.06:0,27,503	0/0:11,0:24:30.10:0,30,559	0/0:33,0:33:63.16:0,63,1020	1/1:5,0:15:26.93:217,27,0	1/1:6,6:13:24.08:852,24,0	1/1:2,3:5:9.03:339,9,0	1/1:5,0:17:29.95:272,30,0	1/1:4,0:15:23.94:195,24,0	1/1:7,0:14:20.95:171,21,0	1/1:2,9:11:24.08:984,24,0	0/0:4,0:15:23.88:0,24,447	1/1:11,4:14:9.03:363,9,0	0/0:6,0:21:39.13:0,39,726	0/0:12,0:11:15:0,15,269	0/0:5,0:5:15.04:0,15,268	0/0:31,0:31:66.22:0,66,1574	1/1:0,0:2:5.99:49,6,0	1/1:2,0:7:9.45:74,9,0	1/1:8,0:27:44.90:369,45,0	1/1:2,0:7:11.99:125,12,0	1/1:8,6:17:30.07:961,30,0	1/1:7,8:15:15.05:606,15,0	1/1:0,3:3:9.03:372,9,0
chr10	17101189	.	AC	A	870.32	PASS	AB=0.958;AC=10;AF=0.179;AN=56;BaseQRankSum=-0.571;DP=212;FS=0.774;HRun=9;HaplotypeScore=30.3525;InbreedingCoeff=0.4867;MQ=87.05;MQ0=0;MQRankSum=0.839;QD=11.16;ReadPosRankSum=1.947;VQSLOD=1.4072;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:15:20.41:0,20,153	0/0:3,0:3:6.01:0,6,60	0/0:10,0:9:9.44:0,9,80	0/0:10,0:11:5.32:0,5,47	0/0:4,0:4:6.02:0,6,69	1/1:1,10:12:29.05:253,29,0	1/1:4,16:20:45.02:412,45,0	0/1:11,0:11:5.12:5,0,188	0/0:1,0:4:8.69:0,9,63	0/0:6,0:6:8.98:0,9,86	0/0:2,0:2:6.02:0,6,69	0/0:3,0:4:2.84:0,3,14	0/0:2,0:2:5.04:0,5,36	0/0:0,0:3:5.68:0,6,29	0/0:7,0:7:15.02:0,15,155	1/1:6,9:15:29.99:269,30,0	0/0:12,1:13:27.08:0,27,311	1/1:5,4:9:9:80,9,0	0/0:2,0:2:3:0,3,25	0/0:4,0:4:8.99:0,9,90	0/0:14,0:14:39.10:0,39,439	0/0:3,0:4:2.88:0,3,15	0/0:2,0:3:2.84:0,3,14	0/0:5,0:9:19.86:0,20,125	0/0:7,0:8:17.55:0,18,133	0/0:5,0:5:9.03:0,9,104	0/1:10,1:11:3.40:3,0,198	0/0:1,0:1:3.01:0,3,35
chr10	17101327	.	T	TCC	14190.94	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-9.652;DP=477;FS=6.901;HRun=7;HaplotypeScore=53.9336;InbreedingCoeff=0.9433;MQ=79.83;MQ0=1;MQRankSum=-2.382;QD=36.96;ReadPosRankSum=3.920;VQSLOD=4.3051;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,24:31:68.60:1092,69,0	1/1:0,6:6:18.06:295,18,0	0/0:12,0:12:19.86:0,20,277	0/0:16,0:15:16.61:0,17,256	1/1:0,8:8:21.03:314,21,0	1/1:3,13:16:27.09:443,27,0	1/1:2,45:48:99:1879,117,0	0/0:13,0:13:33.08:0,33,374	1/1:1,16:18:42.14:668,42,0	1/1:1,11:13:36.09:555,36,0	1/1:1,4:5:9.03:147,9,0	1/1:2,12:14:36.12:591,36,0	1/1:2,11:14:38.62:595,39,0	1/1:4,18:22:48.16:788,48,0	1/1:0,20:20:48.16:786,48,0	1/1:3,14:17:42.13:664,42,0	1/1:4,26:30:72.25:1182,72,0	1/1:1,15:17:36.12:568,36,0	0/0:12,0:12:30.07:0,30,337	0/0:5,0:5:15.04:0,15,175	0/0:35,0:35:86.21:0,86,950	1/1:2,9:11:24.08:392,24,0	1/1:2,11:13:27.09:443,27,0	1/1:2,39:41:99:1723,105,0	1/1:0,0:17:34.81:122,35,0	1/1:0,11:12:35.61:550,36,0	1/1:1,8:10:21.07:344,21,0	1/1:0,1:1:3.01:49,3,0
chr10	17102786	.	T	TA	2202.63	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-9.774;DP=678;FS=2.625;HRun=10;HaplotypeScore=89.5516;InbreedingCoeff=0.9942;MQ=77.64;MQ0=0;MQRankSum=-0.488;QD=20.59;ReadPosRankSum=0.518;VQSLOD=4.2960;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:38:97.65:0,98,754	0/0:17,0:17:47.92:0,48,391	0/0:20,0:20:26.99:0,27,233	0/0:24,0:24:32.87:0,33,263	0/0:27,0:29:72.91:0,73,566	1/1:5,24:29:41.55:647,42,0	1/1:4,25:29:22.77:626,23,0	0/0:41,0:42:89.85:0,90,734	0/0:19,0:20:40.95:0,41,323	0/0:18,0:19:49.94:0,50,396	0/0:17,0:17:31:0,31,307	0/0:26,0:26:71.81:0,72,574	0/0:19,0:19:41.89:0,42,337	0/0:22,0:22:56.89:0,57,462	0/0:25,0:25:56.60:0,57,444	1/1:2,16:18:33.02:338,33,0	0/0:26,0:26:59.85:0,60,483	1/1:3,28:31:72.10:753,72,0	0/0:24,0:26:57.97:0,58,452	0/0:22,0:23:55.84:0,56,432	0/0:33,0:33:62.87:0,63,513	0/0:17,0:17:44.91:0,45,363	0/0:19,0:19:47.94:0,48,394	0/0:19,0:19:50.82:0,51,401	0/0:21,0:21:47.91:0,48,389	0/0:37,0:37:81.82:0,82,750	0/0:25,0:27:69.93:0,70,547	0/0:5,0:5:14.98:0,15,123
chr10	17102942	.	T	TCCTGGTAGAAGG	54675.48	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-3.391;DP=593;FS=8.619;HRun=0;HaplotypeScore=188.3403;InbreedingCoeff=0.9944;MQ=70.02;MQ0=0;MQRankSum=-15.255;QD=118.35;ReadPosRankSum=2.603;VQSLOD=4.2085;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,10:30:57.15:2828,57,0	1/1:3,4:10:24.08:1212,24,0	0/0:17,0:17:20.02:0,20,1247	0/0:13,0:12:33.11:0,33,1028	1/1:10,3:17:33.05:775,33,0	1/1:5,15:22:60.21:3459,60,0	1/1:14,11:27:69.24:3727,69,0	0/0:27,0:27:69.22:0,69,2152	1/1:10,14:27:63.22:3266,63,0	1/1:11,9:20:51.17:2981,51,0	1/1:7,3:11:15.33:298,15,0	1/1:14,15:32:72.20:3754,72,0	1/1:12,11:26:69.24:3667,69,0	1/1:8,12:27:60.20:3238,60,0	1/1:12,7:21:51.10:2498,51,0	1/1:6,11:20:48.16:2613,48,0	1/1:17,8:28:69.24:3395,69,0	1/1:14,6:25:34.83:2448,35,0	0/0:17,0:17:51.16:0,51,1582	0/0:13,0:13:36.12:0,36,1246	0/0:44,0:44:99:0,123,4151	1/1:5,7:14:33.11:1692,33,0	1/1:6,6:13:33.11:1412,33,0	1/1:9,8:20:35.93:1738,36,0	1/1:7,8:20:42.14:2142,42,0	1/1:8,13:23:66.20:3494,66,0	1/1:7,9:20:48.16:2748,48,0	1/1:0,7:9:21.07:1292,21,0
chr10	17104528	.	C	CA	432.18	PASS	AB=0.951;AC=27;AF=0.482;AN=56;BaseQRankSum=-0.890;DP=591;FS=1.745;HRun=17;HaplotypeScore=127.7876;InbreedingCoeff=0.0874;MQ=69.22;MQ0=14;MQRankSum=-0.820;QD=1.14;ReadPosRankSum=-3.422;VQSLOD=-0.7139;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:21:3.80:25,0,4	0/0:9,0:9:10.56:0,11,50	0/0:61,0:20:1.93:0,2,11	0/1:55,0:19:3.01:3,0,19	0/1:35,0:35:10.69:11,0,59	0/0:14,0:14:19.72:0,20,96	0/0:11,0:12:2.10:0,2,63	0/1:25,1:27:13.97:56,0,14	1/1:13,0:13:9.52:38,10,0	0/0:30,0:30:6.06:0,6,119	0/1:26,0:25:40.31:40,0,42	1/1:11,0:11:9.62:60,10,0	1/1:10,0:10:12.46:68,12,0	1/1:6,0:5:3.17:8,3,0	0/1:21,0:21:3.84:4,0,61	0/0:20,1:21:0.53:0,1,73	0/1:24,0:24:2.71:3,0,41	0/0:18,1:19:0.25:0,0,76	0/1:14,5:18:12.19:52,0,12	1/1:7,8:16:17.16:146,17,0	0/1:7,5:12:14.57:15,0,21	1/1:8,0:8:4.71:23,5,0	0/0:14,0:14:1.29:0,1,13	1/1:12,0:11:1.82:6,2,0	1/1:10,0:8:4.22:25,4,0	0/0:27,0:28:9.33:0,9,74	0/1:31,0:31:2.65:3,0,105	0/1:16,0:16:2.80:3,0,12
chr10	17104544	.	AACAAAACAAAAC	A	2637.04	PASS	AB=0.997;AC=22;AF=0.393;AN=56;BaseQRankSum=-9.416;DP=603;FS=0.411;HRun=0;HaplotypeScore=218.3805;InbreedingCoeff=0.5119;MQ=55.78;MQ0=15;MQRankSum=1.887;QD=9.95;ReadPosRankSum=-9.790;VQSLOD=0.0888;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:25:20.13:596,20,0	0/0:11,0:11:21.09:0,21,717	0/0:49,0:14:13.02:0,13,129	0/1:51,0:13:12.78:13,0,197	0/0:27,0:26:33.20:0,33,1069	0/0:15,0:15:11.16:0,11,1265	0/0:15,0:15:23.20:0,23,935	0/0:40,0:39:20.05:0,20,2593	1/1:16,0:16:31.25:462,31,0	0/0:29,0:28:52.10:0,52,1478	0/0:25,0:24:38.85:0,39,1311	1/1:14,0:13:33.98:329,34,0	1/1:11,0:11:23.09:181,23,0	1/1:10,0:9:24:419,24,0	0/1:24,0:24:37.17:37,0,1185	0/0:20,0:19:43.81:0,44,1253	0/1:26,0:26:69.12:69,0,539	0/1:21,0:21:57.98:58,0,1189	0/0:19,0:17:37.12:0,37,1246	0/0:17,0:17:44.97:0,45,1628	0/0:11,0:11:13.30:0,13,523	1/1:2,8:11:17.12:184,17,0	0/1:21,0:21:26.08:26,0,43	1/1:12,0:11:3:26,3,0	1/1:12,0:10:21.27:422,21,0	0/0:32,0:31:54.55:0,55,1298	0/0:27,0:24:45.19:0,45,1158	0/1:7,0:7:16.24:16,0,149
chr10	17104545	.	AC	A	2788.25	PASS	AB=0.928;AC=36;AF=0.643;AN=56;BaseQRankSum=0.006;DP=577;FS=2.427;HRun=1;HaplotypeScore=113.9635;InbreedingCoeff=-0.0151;MQ=55.65;MQ0=15;MQRankSum=-2.694;QD=5.26;ReadPosRankSum=-0.005;VQSLOD=0.3859;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:20:26.21:303,26,0	0/1:10,1:11:22.22:22,0,38	0/1:45,4:13:5.25:5,0,5	0/1:49,0:13:25.88:26,0,67	0/1:28,0:27:53.89:109,0,54	1/1:14,0:14:27.22:147,27,0	1/1:16,0:16:21.94:169,22,0	0/1:41,0:39:60.82:61,0,407	1/1:10,1:11:28.69:216,29,0	0/1:28,1:28:10.77:134,0,11	0/1:26,0:25:85.93:86,0,87	1/1:12,2:13:32.53:225,33,0	1/1:8,2:10:23.15:141,23,0	1/1:9,0:8:23.88:192,24,0	0/1:23,2:25:12.77:136,0,13	0/1:16,3:18:4.06:113,0,4	0/1:25,1:26:29.64:69,0,30	1/1:20,1:21:29.27:182,29,0	0/0:20,0:18:19.96:0,20,248	0/0:16,0:16:38.72:0,39,282	0/0:11,0:11:14.69:0,15,142	1/1:10,0:10:13.40:82,13,0	0/1:2,0:18:13.18:13,0,18	1/1:6,0:6:3:26,3,0	1/1:11,1:10:27.37:176,27,0	0/1:27,2:28:34.10:145,0,34	0/1:26,1:24:0.62:128,0,1	0/1:5,0:5:3.07:54,0,3
chr10	17104546	.	C	CA	3843.33	PASS	AB=0.905;AC=35;AF=0.648;AN=54;BaseQRankSum=4.243;DP=582;FS=6.556;HRun=17;HaplotypeScore=121.9045;InbreedingCoeff=0.3806;MQ=56.58;MQ0=14;MQRankSum=-4.443;QD=8.41;ReadPosRankSum=4.767;VQSLOD=2.1334;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:19:4.10:16,4,0	0/1:9,2:11:2.57:119,0,3	1/1:51,0:15:12.76:44,13,0	0/1:45,0:12:19.10:19,0,62	0/1:26,2:27:0.06:305,0,0	1/1:13,2:15:10.57:281,11,0	1/1:16,2:18:27.63:282,28,0	0/0:40,0:38:68.33:0,68,734	0/1:11,0:11:0.07:18,0,0	1/1:22,8:29:2.38:387,2,0	0/1:21,5:25:1.67:301,0,2	1/1:14,0:13:2.38:10,2,0	1/1:10,0:10:1.24:3,1,0	1/1:9,0:8:0.66:2,1,0	1/1:21,4:25:35.39:319,35,0	1/1:16,3:18:13.69:318,14,0	0/1:25,3:28:13.96:137,0,14	1/1:16,4:21:52.90:547,53,0	0/0:20,0:18:40.47:0,40,382	0/0:16,0:16:30:0,30,375	0/0:12,0:12:17.86:0,18,184	1/1:10,0:10:0.89:2,1,0	0/0:18,0:18:2.70:0,3,21	./.	0/0:13,0:11:1.12:0,1,4	1/1:26,2:27:12.70:337,13,0	1/1:22,5:24:27.99:317,28,0	0/1:4,1:5:1.87:78,0,2
chr10	17104554	.	AAC	A	3754.98	PASS	AB=0.850;AC=30;AF=0.536;AN=56;BaseQRankSum=3.150;DP=517;FS=34.014;HRun=0;HaplotypeScore=112.7155;InbreedingCoeff=0.4170;MQ=56.16;MQ0=13;MQRankSum=-1.246;QD=11.85;ReadPosRankSum=1.264;VQSLOD=1.7884;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:12:23.75:189,24,0	1/1:9,3:12:1.28:169,1,0	0/0:35,0:16:21.01:0,21,123	0/1:44,0:11:1.76:2,0,90	1/1:10,16:25:17.33:640,17,0	0/0:14,0:14:38.87:0,39,490	0/0:16,0:16:18.68:0,19,410	0/0:47,0:45:74.50:0,74,1415	1/1:10,0:10:18.18:137,18,0	0/1:24,5:28:99:382,0,221	1/1:13,11:23:12.68:503,13,0	1/1:5,0:4:8.97:72,9,0	1/1:4,0:4:8.45:50,8,0	1/1:5,0:5:11.85:103,12,0	0/1:19,6:25:61.66:356,0,62	0/0:15,0:15:35.54:0,36,475	0/1:13,13:26:25.62:317,0,26	0/0:20,0:20:22.35:0,22,499	0/0:23,0:21:18.18:0,18,620	0/0:18,0:18:48.14:0,48,737	0/0:12,0:12:17.07:0,17,213	1/1:8,0:8:8.89:59,9,0	0/1:17,0:17:0.13:0,0,1	1/1:4,0:4:6:52,6,0	1/1:8,0:8:18.03:123,18,0	0/1:22,7:28:99:371,0,128	0/1:20,2:22:99:190,0,188	0/1:2,1:3:36.69:41,0,37
chr10	17104555	.	AC	A	2237.81	PASS	AB=0.965;AC=31;AF=0.554;AN=56;BaseQRankSum=3.229;DP=508;FS=7.201;HRun=1;HaplotypeScore=110.1086;InbreedingCoeff=0.3775;MQ=57.75;MQ0=9;MQRankSum=-1.434;QD=7.17;ReadPosRankSum=-2.232;VQSLOD=-0.2507;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:12:26.34:197,26,0	1/1:11,1:12:6.43:98,6,0	0/0:34,0:17:19.20:0,19,154	0/1:40,2:12:26.89:27,0,58	1/1:24,2:25:26.92:333,27,0	0/0:14,0:14:38.08:0,38,402	0/0:16,0:16:13.50:0,13,356	0/0:45,0:43:64.11:0,64,1174	1/1:10,0:10:22.54:160,23,0	0/1:28,2:29:99:176,0,149	1/1:23,1:24:11.63:242,12,0	1/1:5,0:4:8.97:72,9,0	1/1:4,0:4:8.45:51,8,0	1/1:5,0:5:11.97:102,12,0	0/1:24,0:24:38.61:197,0,39	0/0:14,0:14:35.80:0,36,374	0/1:23,2:25:18.95:163,0,19	0/0:21,0:21:32.23:0,32,469	0/0:23,0:21:2.02:0,2,488	0/0:18,0:18:44.23:0,44,563	0/0:11,0:11:17.07:0,17,186	1/1:8,0:8:8.89:59,9,0	1/1:16,0:16:2.57:19,3,0	1/1:4,0:4:6:52,6,0	1/1:8,0:8:21.04:147,21,0	0/1:27,2:28:33.15:247,0,33	0/1:22,0:22:75.31:75,0,137	0/1:3,0:3:18.45:18,0,24
chr10	17104556	.	C	CAAA	5209.07	PASS	AB=0.977;AC=34;AF=0.607;AN=56;BaseQRankSum=5.394;DP=513;FS=9.511;HRun=9;HaplotypeScore=123.5748;InbreedingCoeff=0.7607;MQ=57.96;MQ0=10;MQRankSum=-3.624;QD=16.91;ReadPosRankSum=0.849;VQSLOD=1.8599;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:12:11.84:79,12,0	1/1:9,3:12:21.63:423,22,0	0/0:35,0:18:12.94:0,13,131	0/1:40,0:12:6.51:7,0,48	1/1:22,4:25:61.35:849,61,0	0/0:14,0:14:36.08:0,36,440	0/0:16,0:16:34.73:0,35,445	0/0:48,0:46:96.09:0,96,1184	1/1:10,0:10:7.85:59,8,0	1/1:23,6:30:57.66:711,58,0	1/1:17,5:23:57.10:785,57,0	1/1:5,0:4:2.34:45,2,0	1/1:4,0:4:4.54:26,5,0	0/0:5,0:5:0.89:0,1,23	1/1:20,3:24:46.26:533,46,0	0/0:14,0:14:32.87:0,33,411	1/1:20,2:23:30.63:341,31,0	0/0:21,0:21:38.07:0,38,455	0/0:23,0:21:44.14:0,44,522	0/0:19,0:19:35.99:0,36,450	0/0:10,0:10:12.03:0,12,151	1/1:8,0:8:5.51:39,6,0	0/1:17,0:17:0.50:0,0,1	1/1:5,0:5:6:52,6,0	1/1:8,0:8:12.34:88,12,0	1/1:28,1:28:47.50:564,47,0	1/1:15,3:21:35.95:512,36,0	1/1:4,0:4:6.02:97,6,0
chr10	17105956	.	T	TC	284.88	PASS	AB=1.000;AC=24;AF=0.923;AN=26;DP=57;FS=0.000;HRun=5;HaplotypeScore=11.6181;InbreedingCoeff=0.0909;MQ=60.11;MQ0=0;QD=8.14;VQSLOD=-0.7593;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,1:7:2.99:24,3,0	./.	./.	./.	./.	./.	1/1:4,0:4:8.52:52,9,0	./.	./.	1/1:1,1:2:5.95:47,6,0	./.	./.	0/1:2,0:2:0:0,0,0	1/1:1,1:2:2.98:21,3,0	1/1:2,1:3:5.97:46,6,0	1/1:1,0:1:3:25,3,0	./.	1/1:1,0:1:2.97:20,3,0	1/1:2,0:2:3:28,3,0	1/1:2,0:2:3:25,3,0	1/1:3,0:3:3:25,3,0	./.	./.	1/1:2,2:4:5.96:44,6,0	./.	0/1:2,0:2:0:0,0,0	./.	./.
chr10	17106283	.	C	CT	3882.21	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-8.741;DP=592;FS=16.465;HRun=9;HaplotypeScore=59.8992;InbreedingCoeff=0.9857;MQ=71.42;MQ0=1;MQRankSum=2.637;QD=23.96;ReadPosRankSum=1.390;VQSLOD=2.7858;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,144,1235	1/1:1,4:5:12.03:133,12,0	0/0:17,0:16:19.37:0,19,178	0/0:10,0:10:13.26:0,13,124	1/1:3,10:14:26.91:280,27,0	0/0:15,0:15:44.99:0,45,391	0/0:37,1:38:98.91:0,99,850	0/0:25,0:26:59.94:0,60,516	0/0:15,0:15:44.99:0,45,390	1/1:2,18:21:59.99:642,60,0	1/1:1,19:20:25.10:505,25,0	0/0:20,0:20:56.99:0,57,495	0/0:23,0:23:62.98:0,63,544	0/0:22,0:22:56.98:0,57,495	1/1:5,15:20:42.11:465,42,0	0/0:13,0:13:35.99:0,36,312	1/1:6,32:37:80.71:872,81,0	0/0:33,1:33:80.76:0,81,690	0/0:24,1:25:23.76:0,24,427	0/0:13,0:13:32.99:0,33,286	0/0:37,2:39:35.54:0,36,751	0/0:13,0:14:31.97:0,32,258	0/0:11,0:11:26.97:0,27,234	0/0:36,0:36:95.97:0,96,833	0/0:6,0:6:18:0,18,156	1/1:6,14:21:44.91:461,45,0	1/1:5,12:17:33.08:359,33,0	1/1:0,6:6:15.04:166,15,0
chr10	17108677	.	T	TACACACAC	5184.73	PASS	AB=0.972;AC=48;AF=0.889;AN=54;BaseQRankSum=-0.881;DP=492;FS=17.550;HRun=0;HaplotypeScore=138.4586;InbreedingCoeff=0.2862;MQ=56.36;MQ0=16;MQRankSum=2.179;QD=12.00;ReadPosRankSum=2.585;VQSLOD=2.4568;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:33,0:35:19.89:347,20,0	0/0:3,0:5:0.53:0,1,10	0/0:46,0:15:19.49:0,19,181	0/1:49,0:17:23.36:23,0,28	1/1:15,0:17:9.79:124,10,0	1/1:11,12:26:9.03:369,9,0	1/1:6,7:13:9.03:365,9,0	1/1:24,0:22:28.35:316,28,0	1/1:14,0:15:15.89:285,16,0	1/1:15,0:15:19.21:144,19,0	0/1:16,0:16:15.75:17,0,16	1/1:12,0:15:20.74:398,21,0	1/1:16,0:17:36.42:560,36,0	1/1:10,0:11:2.85:112,3,0	1/1:9,0:12:3.01:56,3,0	1/1:5,9:16:8.82:313,9,0	1/1:15,0:15:12.17:130,12,0	1/1:17,0:17:23.95:469,24,0	1/1:19,0:18:29.52:310,30,0	1/1:14,0:14:1.89:50,2,0	1/1:9,0:9:0.47:1,0,0	1/1:4,0:4:4.26:62,4,0	./.	1/1:9,0:10:2.32:20,2,0	1/1:20,0:20:8.18:74,8,0	1/1:16,0:18:32.28:297,32,0	1/1:17,0:18:17.64:211,18,0	1/1:5,0:6:6:131,6,0
chr10	17108701	.	G	GAC	2397.16	PASS	AB=0.859;AC=35;AF=0.648;AN=54;BaseQRankSum=2.469;DP=512;FS=23.041;HRun=0;HaplotypeScore=113.7071;InbreedingCoeff=0.1322;MQ=50.17;MQ0=15;MQRankSum=0.865;QD=7.29;ReadPosRankSum=3.438;VQSLOD=1.8151;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:29,6:35:2.55:330,3,0	1/1:4,2:6:3.90:50,4,0	0/0:45,0:13:5.82:0,6,70	0/0:56,0:15:16:0,16,146	1/1:5,8:14:4.46:49,4,0	0/1:28,0:28:10.35:10,0,111	1/1:12,0:12:5.42:37,5,0	0/1:33,0:31:36.10:373,0,36	0/1:7,7:14:5.92:81,0,6	1/1:10,6:16:18.45:236,18,0	0/0:11,5:15:2.58:0,3,35	1/1:6,10:16:12.04:182,12,0	1/1:16,3:19:22.51:228,23,0	1/1:5,6:11:3.01:44,3,0	0/1:7,8:16:27:43,0,27	0/1:16,0:16:8.46:8,0,110	0/1:11,8:19:24.18:77,0,24	0/0:17,0:17:26.73:0,27,289	0/0:15,0:14:2.17:0,2,34	./.	0/0:7,13:20:3.01:0,3,35	1/1:5,0:5:5.99:66,6,0	1/1:8,0:8:2.99:24,3,0	0/1:12,0:12:26.61:75,0,27	1/1:13,1:14:2.86:47,3,0	1/1:16,4:20:1.59:427,2,0	1/1:6,7:13:10.40:143,10,0	1/1:1,0:2:3:26,3,0
chr10	17108703	.	C	CAG	1484.61	PASS	AB=0.965;AC=23;AF=0.411;AN=56;BaseQRankSum=4.691;DP=510;FS=13.534;HRun=0;HaplotypeScore=115.7591;InbreedingCoeff=-0.2474;MQ=47.98;MQ0=15;MQRankSum=4.473;QD=4.71;ReadPosRankSum=3.513;VQSLOD=2.0972;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:33,1:34:64.97:175,0,65	0/1:6,0:6:7.81:36,0,8	0/0:43,0:13:21.64:0,22,236	0/0:55,0:15:30.75:0,31,345	1/1:14,0:14:13.35:97,13,0	0/1:28,0:28:13.94:14,0,185	0/0:13,0:13:3.77:0,4,27	0/1:33,0:31:90.55:91,0,340	0/1:14,0:14:35.81:36,0,45	0/1:14,2:16:6.22:263,0,6	0/1:14,1:14:24.27:24,0,37	0/1:15,0:15:12.98:96,0,13	0/1:19,0:19:43.08:43,0,114	1/1:11,0:11:3:27,3,0	0/1:16,0:16:27.85:28,0,36	0/0:16,0:16:7.14:0,7,180	0/1:16,2:18:61.42:122,0,61	0/0:18,0:18:41.42:0,41,476	0/0:16,0:15:44.54:0,45,336	0/0:14,0:14:14.90:0,15,113	0/0:20,0:20:6:0,6,70	0/1:5,0:5:14.73:35,0,15	0/1:8,0:8:0:0,0,0	0/1:11,1:12:27.92:28,0,55	0/1:14,0:14:6.76:7,0,83	0/1:18,2:20:40.44:355,0,40	0/1:13,2:15:47.59:121,0,48	1/1:2,0:2:5.99:49,6,0
chr10	17110268	.	AAC	A	5874.12	PASS	AB=0.935;AC=28;AF=0.500;AN=56;BaseQRankSum=8.345;DP=970;FS=0.354;HRun=0;HaplotypeScore=169.9669;InbreedingCoeff=0.2613;MQ=59.14;MQ0=29;MQRankSum=1.020;QD=8.37;ReadPosRankSum=3.907;VQSLOD=4.3693;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:23,33:58:3.01:789,0,3	0/0:15,0:15:8.58:0,9,61	0/0:34,0:12:9.03:0,9,138	0/1:50,0:25:26.88:27,0,79	0/0:3,0:23:2.99:0,3,23	0/0:26,0:26:60.55:0,61,802	0/1:35,4:39:87.15:87,0,909	0/1:31,0:39:27.30:116,0,27	0/0:35,0:34:66.19:0,66,992	0/1:14,0:35:66.60:105,0,67	0/0:18,0:18:6.46:0,6,50	1/1:20,23:45:56.04:610,56,0	1/1:13,22:35:56.99:633,57,0	1/1:15,30:45:80.60:867,81,0	0/1:11,0:41:12.06:12,0,42	0/0:50,2:52:73.86:0,74,1591	0/1:21,0:22:18.99:19,0,33	0/0:32,2:36:18.19:0,18,1057	1/1:21,0:25:28.49:130,28,0	1/1:7,0:18:19.51:97,20,0	1/1:22,1:81:99:507,99,0	1/1:8,17:27:38.68:407,39,0	1/1:7,15:21:36.59:453,37,0	1/1:10,41:52:80.73:887,81,0	0/0:29,0:29:15.47:0,15,534	0/1:13,0:29:50.46:50,0,125	0/1:18,0:18:32.34:64,0,32	0/1:5,0:5:12.26:12,0,19
chr10	17110296	.	CAG	C	1351.18	PASS	AB=0.953;AC=13;AF=0.232;AN=56;BaseQRankSum=13.092;DP=998;FS=1.749;HRun=0;HaplotypeScore=185.0452;InbreedingCoeff=-0.2932;MQ=56.81;MQ0=24;MQRankSum=-0.029;QD=3.02;ReadPosRankSum=6.177;VQSLOD=2.5301;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:61,0:60:99:148,0,395	0/0:11,5:16:23.60:0,24,231	0/0:34,0:12:21.96:0,22,280	0/0:54,0:26:15.98:0,16,453	0/0:23,0:24:11.97:0,12,96	0/0:22,1:23:62.38:0,62,1015	0/0:40,0:40:55.89:0,56,1357	0/0:52,0:52:88.86:0,89,976	0/0:32,0:31:58.26:0,58,1239	0/1:41,0:43:99:222,0,547	0/0:8,7:15:18.01:0,18,193	0/1:37,0:37:99:125,0,130	0/1:35,0:34:99:107,0,199	0/1:46,0:44:99:169,0,171	0/1:42,0:43:1.45:1,0,249	0/0:52,0:52:99:0,140,2320	0/1:28,0:29:30.85:31,0,387	0/0:41,0:41:99:0,103,1635	0/0:29,0:22:29.23:0,29,270	0/0:18,0:18:22.75:0,23,152	0/0:101,0:99:99:0,168,1033	0/1:24,0:24:84.40:84,0,88	0/1:24,0:22:86.07:86,0,110	0/1:54,0:54:99:178,0,130	0/0:19,0:19:51.11:0,51,790	0/1:23,3:26:99:211,0,370	0/1:12,3:21:99:115,0,277	0/1:3,2:5:24.12:24,0,84
chr10	17113549	.	T	TC	5879.36	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-7.155;DP=506;FS=0.000;HRun=4;HaplotypeScore=50.3910;InbreedingCoeff=0.9939;MQ=66.09;MQ0=14;MQRankSum=1.036;QD=35.42;ReadPosRankSum=1.413;VQSLOD=5.1002;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:28:84.24:0,84,950	1/1:1,5:6:15.05:200,15,0	0/0:11,0:10:21.05:0,21,234	0/0:13,0:12:30.02:0,30,311	1/1:6,27:32:84.19:1103,84,0	0/0:15,0:14:33.09:0,33,373	0/0:17,0:17:45.13:0,45,508	0/0:20,0:20:51.14:0,51,569	0/0:14,0:14:36.10:0,36,407	1/1:1,20:21:57.19:774,57,0	1/1:1,13:14:36.12:486,36,0	0/0:17,0:17:45.13:0,45,510	0/0:13,0:13:33.06:0,33,361	0/0:12,0:12:36.03:0,36,388	1/1:0,13:13:29.89:410,30,0	0/0:19,0:19:48.14:0,48,544	1/1:2,23:24:63.21:861,63,0	0/0:31,0:28:78.20:0,78,873	0/0:21,0:21:51.13:0,51,567	0/0:14,0:14:36.10:0,36,406	0/0:29,0:26:69.16:0,69,768	0/0:10,0:10:27.08:0,27,305	0/0:18,0:18:41.99:0,42,433	0/0:17,0:15:42.10:0,42,464	0/0:19,0:17:48.10:0,48,530	1/1:0,28:28:84.28:1146,84,0	1/1:2,17:20:51.17:695,51,0	1/1:1,5:5:15.05:205,15,0
chr10	17114080	.	G	GT	12135.12	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-11.886;DP=621;FS=13.389;HRun=9;HaplotypeScore=56.2076;InbreedingCoeff=0.9778;MQ=78.49;MQ0=0;MQRankSum=-4.813;QD=24.66;ReadPosRankSum=2.386;VQSLOD=4.6829;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,31:32:78.21:863,78,0	1/1:4,12:16:13.05:372,13,0	0/0:17,0:17:23.16:0,23,219	0/0:15,0:15:30.04:0,30,241	1/1:5,33:39:70.03:978,70,0	0/0:37,0:37:92.92:0,93,800	0/0:24,1:25:29.76:0,30,479	1/1:9,17:26:51.14:564,51,0	1/1:3,11:14:30.08:332,30,0	1/1:4,22:26:66.15:713,66,0	1/1:2,12:14:36.06:385,36,0	1/1:0,12:12:33.09:365,33,0	1/1:3,13:16:33.09:365,33,0	1/1:3,16:19:48.13:531,48,0	1/1:3,21:24:34.11:604,34,0	0/0:17,0:17:38.98:0,39,339	1/1:3,21:24:57.15:631,57,0	0/0:17,1:18:14.81:0,15,358	1/1:6,16:22:28.05:517,28,0	1/1:3,22:26:65.89:671,66,0	1/1:4,16:20:39.11:431,39,0	1/1:1,12:13:10.04:339,10,0	1/1:9,22:32:37.11:629,37,0	1/1:4,27:31:75.20:830,75,0	1/1:3,16:19:42.11:465,42,0	1/1:5,17:22:51.13:556,51,0	1/1:4,29:32:75.20:829,75,0	1/1:6,6:12:15.04:166,15,0
chr10	17114925	.	AGTGT	A	924.54	PASS	AB=0.869;AC=30;AF=0.600;AN=50;BaseQRankSum=6.067;DP=546;FS=4.740;HRun=0;HaplotypeScore=125.4680;InbreedingCoeff=0.0155;MQ=69.06;MQ0=13;MQRankSum=-1.761;QD=2.47;ReadPosRankSum=3.408;VQSLOD=1.5069;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,20:27:3.01:31,3,0	1/1:8,0:8:6:53,6,0	0/0:31,0:19:18:0,18,252	0/0:40,0:25:29.17:0,29,355	0/0:14,0:14:5.98:0,6,46	0/1:12,0:12:14.99:21,0,15	0/0:9,0:9:5.99:0,6,49	1/1:32,0:31:15.77:182,16,0	1/1:6,0:18:2.96:19,3,0	0/1:24,0:24:10.01:114,0,10	./.	1/1:5,11:16:6.02:87,6,0	1/1:4,11:15:5.39:99,5,0	1/1:6,17:23:2.80:50,3,0	./.	0/1:12,0:12:18.94:21,0,19	0/0:31,0:30:2.97:0,3,20	0/1:20,0:20:9.97:44,0,10	0/1:10,0:21:6.02:100,0,6	0/1:4,0:22:10.26:21,0,10	0/1:15,0:14:6.99:28,0,7	1/1:4,15:19:3.01:47,3,0	0/1:4,18:21:0.27:0,0,0	1/1:6,17:23:3.01:39,3,0	./.	0/1:19,0:18:18.98:42,0,19	0/1:20,0:18:15.38:48,0,15	1/1:4,0:4:3:27,3,0
chr10	17114930	.	GTGTGTGTGTGTGTGTGTA	G	1364.65	PASS	AB=0.905;AC=22;AF=0.458;AN=48;BaseQRankSum=-2.572;DP=564;FS=4.540;HRun=0;HaplotypeScore=190.3832;InbreedingCoeff=0.1451;MQ=61.99;MQ0=22;MQRankSum=2.045;QD=4.50;ReadPosRankSum=1.934;VQSLOD=2.0339;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:3.48:0,3,71	0/1:9,0:8:43.63:44,0,89	0/0:28,0:16:11.93:0,12,380	0/1:37,0:22:5:5,0,399	./.	1/1:5,6:11:6.01:171,6,0	0/1:4,6:9:0:0,0,0	1/1:27,0:26:2.22:285,2,0	0/0:17,0:16:3.01:0,3,38	0/1:29,0:27:20.28:20,0,406	./.	0/0:17,0:17:6.49:0,6,111	0/1:16,0:16:0.29:0,0,84	0/0:21,0:21:3.01:0,3,60	./.	1/1:5,10:14:7.76:180,8,0	0/0:31,0:30:3.01:0,3,144	0/1:8,13:21:99:219,0,137	1/1:20,0:19:2.11:289,2,0	1/1:21,0:21:3.01:80,3,0	1/1:14,0:12:14.85:111,15,0	0/0:19,0:19:3.01:0,3,99	0/1:24,0:22:0.26:0,0,0	1/1:25,0:25:2.97:20,3,0	./.	0/1:24,0:23:74.41:74,0,187	0/0:23,0:21:5.72:0,6,68	0/0:7,0:7:2.84:0,3,14
chr10	17114938	.	GTGTGTGTGTA	G	2685.22	PASS	AB=1.000;AC=37;AF=0.740;AN=50;BaseQRankSum=0.478;DP=578;FS=0.000;HRun=0;HaplotypeScore=143.2726;InbreedingCoeff=0.3746;MQ=53.10;MQ0=30;MQRankSum=2.160;QD=6.66;ReadPosRankSum=2.431;VQSLOD=2.4951;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:33,0:32:0.83:1,1,0	1/1:8,2:9:11.49:231,11,0	0/0:23,0:11:11.93:0,12,184	0/1:32,0:17:4.87:5,0,147	./.	1/1:11,0:11:6.01:100,6,0	0/1:9,0:8:0:0,0,0	1/1:31,0:28:22.14:348,22,0	1/1:20,0:19:1.78:35,2,0	1/1:6,20:24:46.15:613,46,0	./.	1/1:24,0:24:8.58:73,9,0	1/1:20,0:20:7.66:107,8,0	1/1:23,0:23:2.04:12,2,0	./.	1/1:15,0:13:11.84:129,12,0	0/0:31,1:28:3.01:0,3,85	0/1:18,0:18:34.66:144,0,35	1/1:19,0:16:13.10:319,13,0	1/1:20,0:20:2.93:78,3,0	1/1:14,0:12:14.85:111,15,0	0/0:20,0:20:3.88:0,4,26	0/0:26,0:24:0.12:0,0,0	1/1:28,0:28:3.94:23,4,0	0/0:24,0:23:0.47:0,0,1	1/1:18,1:18:30.35:331,30,0	1/1:23,1:22:5.98:90,6,0	1/1:7,0:7:3.01:61,3,0
chr10	17114940	.	GTGTGTGTA	G	2967.32	PASS	AB=1.000;AC=39;AF=0.780;AN=50;BaseQRankSum=0.282;DP=586;FS=2.420;HRun=0;HaplotypeScore=135.7346;InbreedingCoeff=0.3186;MQ=51.43;MQ0=32;MQRankSum=1.619;QD=6.87;ReadPosRankSum=1.859;VQSLOD=2.3845;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:32,0:31:2.56:18,3,0	1/1:10,0:9:15.01:221,15,0	0/0:21,0:9:11.90:0,12,125	0/1:32,0:17:11:11,0,109	./.	1/1:12,0:12:5.64:84,6,0	0/1:9,0:8:0:0,0,0	1/1:34,0:31:41.77:464,42,0	1/1:19,0:18:2.12:56,2,0	1/1:26,0:24:46.66:578,47,0	./.	1/1:24,0:24:12.48:109,12,0	1/1:20,0:20:7.94:138,8,0	1/1:24,0:24:4.85:41,5,0	./.	1/1:15,0:13:11.84:114,12,0	0/0:7,24:27:3.01:0,3,66	0/1:18,0:18:12.81:112,0,13	1/1:21,0:18:22.57:330,23,0	1/1:23,0:22:2.72:61,3,0	1/1:16,0:14:14.89:111,15,0	1/1:20,0:20:4.95:29,5,0	0/0:26,0:24:0.08:0,0,0	1/1:29,0:29:8.34:61,8,0	0/0:24,0:22:0.47:0,0,1	1/1:3,15:18:30.35:342,30,0	1/1:5,18:22:5.69:128,6,0	1/1:0,7:7:3.01:80,3,0
chr10	17114948	.	ATGTGTGTG	A	1477.33	PASS	AB=1.000;AC=24;AF=0.480;AN=50;BaseQRankSum=1.039;DP=586;FS=16.904;HRun=0;HaplotypeScore=136.2275;InbreedingCoeff=0.0323;MQ=47.61;MQ0=43;MQRankSum=-2.324;QD=4.52;ReadPosRankSum=4.215;VQSLOD=0.9912;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:33:0:0,0,0	1/1:11,0:10:5.98:110,6,0	0/0:14,0:3:3.01:0,3,46	0/0:27,0:14:3.01:0,3,40	./.	1/1:21,0:18:2.58:52,3,0	0/0:8,0:6:0:0,0,0	1/1:32,0:28:10.64:284,11,0	1/1:19,0:18:2.32:38,2,0	1/1:22,0:20:10.73:244,11,0	./.	0/1:25,0:25:13.40:36,0,13	0/1:21,0:21:61.12:61,0,71	0/1:24,0:24:7.62:8,0,8	./.	0/1:14,0:12:17.95:47,0,18	0/0:31,0:27:3.01:0,3,73	0/1:16,0:15:32.80:97,0,33	1/1:15,3:15:20.97:321,21,0	1/1:17,7:24:3.61:71,4,0	0/0:18,1:16:0.47:0,0,1	0/0:20,0:20:6.76:0,7,42	1/1:26,0:24:0.25:0,0,0	0/0:32,0:32:5.91:0,6,31	0/0:23,0:22:0.47:0,0,1	0/1:19,0:17:31.53:108,0,32	0/1:23,0:20:29.62:78,0,30	0/1:11,0:8:9.68:56,0,10
chr10	17116073	.	TG	T	4450.67	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=11.256;DP=736;FS=9.555;HRun=3;HaplotypeScore=70.8416;InbreedingCoeff=0.9975;MQ=85.69;MQ0=0;MQRankSum=-3.611;QD=32.97;ReadPosRankSum=2.212;VQSLOD=5.0282;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,114,1582	0/0:16,0:16:42.10:0,42,563	0/0:29,0:29:70.99:0,71,912	0/0:21,0:21:55.36:0,55,735	0/0:26,0:26:78.26:0,78,1119	1/1:2,16:18:48.15:595,48,0	1/1:0,29:29:72.23:893,72,0	0/0:26,0:26:75.25:0,75,1077	0/0:24,0:24:72.24:0,72,1032	0/0:21,0:21:60.19:0,60,847	0/0:21,0:21:60.18:0,60,843	0/0:35,0:35:99:0,105,1462	0/0:30,0:30:90.30:0,90,1294	0/0:25,0:25:75.16:0,75,1015	0/0:28,0:28:81.25:0,81,1131	1/1:1,20:21:17.05:663,17,0	0/0:50,0:50:99:0,147,2044	1/1:1,41:42:99:1413,114,0	0/0:19,0:19:54.17:0,54,759	0/0:11,0:11:30.10:0,30,429	0/0:46,0:46:99:0,132,1897	0/0:20,0:20:60.20:0,60,848	0/0:11,0:11:33.11:0,33,474	0/0:31,0:31:93.31:0,93,1337	1/1:1,24:25:72.22:887,72,0	0/0:30,0:30:87.28:0,87,1230	0/0:26,0:26:78.23:0,78,1084	0/0:16,0:16:48.14:0,48,672
chr10	17116416	.	A	AC	23223.33	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-7.284;DP=654;FS=11.367;HRun=2;HaplotypeScore=60.5685;InbreedingCoeff=0.9931;MQ=81.42;MQ0=0;MQRankSum=-7.060;QD=37.70;ReadPosRankSum=6.109;VQSLOD=4.2964;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,41:42:99:1684,117,0	1/1:2,10:12:33.11:472,33,0	0/0:15,0:15:20.93:0,21,223	0/0:22,0:22:39.92:0,40,413	1/1:2,24:26:65.99:896,66,0	1/1:1,20:21:57.15:792,57,0	1/1:1,33:34:99:1420,99,0	1/1:3,27:30:84.09:1136,84,0	1/1:0,15:15:36.12:518,36,0	1/1:0,25:25:72.07:944,72,0	1/1:0,11:11:33.11:474,33,0	1/1:2,18:20:51.17:733,51,0	1/1:1,20:21:54.18:777,54,0	1/1:1,16:17:47.76:675,48,0	1/1:1,23:24:60.20:864,60,0	1/1:1,20:21:54.18:774,54,0	1/1:0,27:27:72.24:1036,72,0	1/1:0,25:25:72.09:986,72,0	1/1:3,21:24:63.18:869,63,0	1/1:0,11:11:32.90:444,33,0	1/1:4,60:64:99:2330,163,0	1/1:0,30:30:81.27:1160,81,0	1/1:1,13:14:36.12:511,36,0	1/1:1,41:42:99:1425,99,0	1/1:0,15:15:45.15:647,45,0	1/1:3,17:20:51.09:708,51,0	1/1:2,17:19:48.16:689,48,0	1/1:0,6:6:18.06:259,18,0
chr10	17116585	.	G	GAAA	18657.26	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-5.884;DP=624;FS=15.065;HRun=10;HaplotypeScore=96.0226;InbreedingCoeff=0.8406;MQ=68.08;MQ0=1;MQRankSum=-6.556;QD=31.52;ReadPosRankSum=2.749;VQSLOD=2.5078;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,28:39:63.17:1068,63,0	1/1:1,8:9:15.01:248,15,0	0/0:13,0:16:35.67:0,36,322	0/0:15,0:15:1.95:0,2,134	1/1:3,14:19:45.23:494,45,0	1/1:6,14:27:57.04:902,57,0	1/1:4,13:21:36.12:646,36,0	1/1:10,19:31:63.12:1025,63,0	1/1:2,9:11:23.96:450,24,0	1/1:8,12:21:39.11:663,39,0	1/1:10,11:22:60.64:973,61,0	1/1:4,14:23:39.03:593,39,0	1/1:4,7:14:28.32:453,28,0	1/1:5,8:14:18.06:331,18,0	1/1:5,13:19:32.93:594,33,0	1/1:2,12:20:33.07:529,33,0	1/1:4,30:35:69.24:1327,69,0	1/1:1,18:20:45.09:778,45,0	1/1:6,13:25:53.91:852,54,0	1/1:3,30:33:83.95:1309,84,0	1/1:1,14:17:21.05:369,21,0	1/1:4,17:26:60.06:937,60,0	1/1:6,26:33:48.04:881,48,0	1/1:2,24:27:39.11:715,39,0	1/1:3,18:26:36.08:623,36,0	1/1:5,19:26:61.33:951,61,0	1/1:7,17:25:43.37:776,43,0	1/1:1,7:8:9.03:173,9,0
chr10	17117748	.	TG	T	27616.06	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=9.112;DP=827;FS=0.000;HRun=2;HaplotypeScore=220.1801;InbreedingCoeff=0.9916;MQ=85.56;MQ0=0;MQRankSum=-12.551;QD=36.05;ReadPosRankSum=7.187;VQSLOD=3.5063;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,56:56:99:2142,166,0	1/1:0,10:10:30.10:389,30,0	0/0:28,0:28:74.70:0,75,1132	0/0:33,0:33:93.26:0,93,1316	1/1:0,29:29:87.28:1129,87,0	1/1:0,28:28:84.27:1090,84,0	1/1:1,39:40:99:1402,108,0	1/1:1,31:32:93.30:1208,93,0	1/1:0,28:28:81.26:1052,81,0	1/1:2,27:29:75.24:973,75,0	1/1:0,16:16:48.15:610,48,0	1/1:1,30:31:87.28:1129,87,0	1/1:1,34:35:93.30:1207,93,0	1/1:0,36:36:99:1285,99,0	1/1:3,32:35:87.28:1129,87,0	1/1:2,41:43:99:1518,117,0	1/1:1,40:41:99:1440,111,0	1/1:0,16:16:48.16:623,48,0	1/1:1,22:23:66.19:837,66,0	1/1:0,32:32:90.24:1144,90,0	1/1:0,41:41:99:1438,111,0	1/1:1,28:29:75.24:969,75,0	1/1:0,16:16:45.15:584,45,0	1/1:0,30:30:84.27:1083,84,0	1/1:1,26:27:72.23:935,72,0	1/1:0,30:30:90.29:1169,90,0	1/1:2,26:28:72.12:935,72,0	1/1:0,5:5:15.05:195,15,0
chr10	17119787	.	T	TA	4078.02	PASS	AB=0.778;AC=52;AF=0.929;AN=56;BaseQRankSum=-0.339;DP=458;FS=4.321;HRun=11;HaplotypeScore=103.4041;InbreedingCoeff=-0.0522;MQ=72.39;MQ0=0;MQRankSum=-3.128;QD=8.90;ReadPosRankSum=0.831;VQSLOD=2.8796;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:5,19:24:18.63:364,0,19	1/1:2,0:7:11.12:53,11,0	0/1:17,0:14:11.74:12,0,41	0/1:8,0:8:15.92:16,0,29	1/1:15,1:26:27.94:151,28,0	1/1:4,0:17:17.04:86,17,0	1/1:6,0:11:17.04:86,17,0	1/1:19,0:30:33.18:174,33,0	1/1:6,0:10:5.68:29,6,0	1/1:12,0:16:22:131,22,0	1/1:12,0:22:31.85:168,32,0	1/1:2,4:6:12.02:122,12,0	1/1:3,9:12:27.05:273,27,0	1/1:3,8:12:23.88:227,24,0	1/1:7,0:14:25.57:129,26,0	1/1:3,0:10:17.04:86,17,0	1/1:12,1:24:21.21:106,21,0	1/1:9,1:20:23.26:117,23,0	1/1:10,0:18:19.35:131,19,0	1/1:7,0:26:51.06:259,51,0	1/1:1,0:3:2.84:14,3,0	1/1:2,14:16:15.85:342,16,0	0/1:6,11:17:16.41:214,0,16	1/1:1,8:9:21.04:213,21,0	1/1:2,0:19:39.85:203,40,0	1/1:9,0:25:30.48:161,30,0	1/1:18,0:29:33.24:179,33,0	1/1:7,0:8:5.78:32,6,0
chr10	17121317	.	ACGCCC	A	10743.98	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=13.355;DP=645;FS=0.330;HRun=0;HaplotypeScore=181.8425;InbreedingCoeff=0.9941;MQ=93.55;MQ0=0;MQRankSum=-18.001;QD=64.72;ReadPosRankSum=3.015;VQSLOD=5.6805;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,123,4010	1/1:0,13:13:36.12:820,36,0	0/0:30,0:30:87.26:0,87,2646	0/0:32,0:32:90.75:0,91,2835	1/1:0,27:27:75.26:1740,75,0	0/0:14,0:14:42.13:0,42,942	0/0:37,0:37:88.38:0,88,2475	0/0:28,0:28:29.29:0,29,1666	0/0:26,0:26:78.27:0,78,1831	1/1:0,14:14:42.12:931,42,0	1/1:0,16:16:48.16:1115,48,0	0/0:27,0:27:81.24:0,81,2542	0/0:14,0:14:42.14:0,42,1345	0/0:30,0:30:87.30:0,87,2889	1/1:0,27:27:72.25:1673,72,0	0/0:15,0:15:20.16:0,20,958	1/1:0,17:17:48.16:1116,48,0	0/0:17,0:17:51.18:0,51,1200	0/0:24,0:24:72.25:0,72,1639	0/0:21,0:21:63.21:0,63,1413	0/0:27,0:27:54.74:0,55,1686	0/0:26,0:25:78.26:0,78,2520	0/0:24,0:24:72.25:0,72,2376	0/0:28,0:28:81.19:0,81,2537	0/0:18,0:18:29.19:0,29,1143	1/1:0,32:32:96.33:2233,96,0	1/1:0,16:16:36.12:837,36,0	1/1:0,4:4:12.04:279,12,0
chr10	17123245	.	AT	A	3035.63	PASS	AB=0.706;AC=32;AF=0.571;AN=56;BaseQRankSum=9.615;DP=600;FS=0.000;HRun=13;HaplotypeScore=77.5494;InbreedingCoeff=0.6653;MQ=72.36;MQ0=2;MQRankSum=0.241;QD=7.59;ReadPosRankSum=3.946;VQSLOD=2.7065;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,0:44:66.09:204,66,0	0/0:11,1:12:11.14:0,11,270	0/0:15,0:12:5.92:0,6,98	0/1:19,0:17:44.43:44,0,56	0/0:15,0:15:27.01:0,27,246	1/1:7,13:20:32.76:241,33,0	1/1:5,17:23:23.57:327,24,0	1/1:12,17:30:32.14:355,32,0	1/1:8,18:26:44.70:328,45,0	0/0:16,0:18:26.87:0,27,243	0/0:23,0:25:35.80:0,36,316	1/1:5,1:22:32.37:106,32,0	1/1:5,0:21:32.57:94,33,0	1/1:5,0:19:22.38:65,22,0	0/0:24,2:27:31.27:0,31,468	1/1:7,13:20:6.70:212,7,0	0/0:25,0:25:70.34:0,70,665	1/1:5,21:28:5.39:348,5,0	1/1:3,10:13:26.80:197,27,0	0/1:6,15:21:35.70:198,0,36	0/1:9,12:22:42.01:169,0,42	1/1:0,0:15:22.38:65,22,0	1/1:5,1:19:19.65:58,20,0	1/1:2,0:24:42.77:124,43,0	0/1:5,7:13:6.28:114,0,6	0/0:29,1:31:23.29:0,23,519	0/0:26,0:26:53.81:0,54,478	0/0:6,0:6:12.02:0,12,117
chr10	17124458	.	AC	A	32601.01	PASS	AB=0.810;AC=54;AF=0.964;AN=56;BaseQRankSum=-7.747;DP=959;FS=1.804;HRun=2;HaplotypeScore=131.4212;InbreedingCoeff=-0.0371;MQ=66.60;MQ0=0;MQRankSum=-3.734;QD=33.99;ReadPosRankSum=5.108;VQSLOD=4.2901;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,36:43:87.02:1214,87,0	1/1:0,13:13:39.13:506,39,0	0/1:17,4:19:99:112,0,183	0/1:17,7:22:99:230,0,194	1/1:0,32:32:90.29:1169,90,0	1/1:0,30:30:81.26:1051,81,0	1/1:0,23:23:60.20:779,60,0	1/1:0,59:59:99:2257,175,0	1/1:0,33:33:93.30:1208,93,0	1/1:1,61:62:99:2331,184,0	1/1:0,31:31:84.27:1090,84,0	1/1:0,45:45:99:1558,120,0	1/1:1,33:34:87.28:1129,87,0	1/1:0,29:29:84.27:1091,84,0	1/1:2,34:36:93.30:1208,93,0	1/1:0,38:38:99:1441,111,0	1/1:1,29:30:72.23:935,72,0	1/1:0,16:17:50.19:616,50,0	1/1:1,12:13:33.11:429,33,0	1/1:1,49:49:99:1753,135,0	1/1:1,58:59:99:2025,157,0	1/1:0,45:45:99:1674,129,0	1/1:1,31:32:90.29:1169,90,0	1/1:0,20:20:45.11:584,45,0	1/1:0,41:42:99:1461,114,0	1/1:1,54:55:99:2065,160,0	1/1:2,28:30:84.27:1089,84,0	1/1:1,11:12:33.11:429,33,0
chr10	17125252	.	G	GT	7219.72	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-13.226;DP=600;FS=8.693;HRun=1;HaplotypeScore=64.2446;InbreedingCoeff=0.9859;MQ=81.30;MQ0=0;MQRankSum=-0.010;QD=41.73;ReadPosRankSum=1.587;VQSLOD=5.1289;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:96.29:0,96,1225	1/1:0,4:4:12.04:180,12,0	0/0:21,0:21:27.53:0,28,390	0/0:17,0:17:38.89:0,39,431	1/1:1,12:13:36.12:539,36,0	0/0:22,0:22:59.70:0,60,763	0/0:25,0:25:69.22:0,69,894	0/0:20,0:20:54.18:0,54,701	0/0:25,0:25:72.23:0,72,933	1/1:1,14:15:42.14:627,42,0	1/1:0,12:12:36.12:539,36,0	0/0:24,0:24:69.15:0,69,858	0/0:16,0:16:48.16:0,48,623	0/0:26,0:26:78.25:0,78,1012	1/1:0,31:31:87.29:1304,87,0	0/0:23,0:23:66.20:0,66,843	1/1:2,39:41:99:1663,111,0	0/0:31,0:31:93.30:0,93,1204	0/0:18,0:18:51.17:0,51,662	0/0:13,0:13:36.12:0,36,467	0/0:52,0:52:99:0,144,1807	0/0:15,0:15:42.14:0,42,544	0/0:4,0:4:9.03:0,9,117	0/0:24,0:24:66.09:0,66,786	0/0:17,0:17:51.15:0,51,647	1/1:0,19:18:57.19:844,57,0	1/1:0,19:19:48.16:717,48,0	1/1:0,19:19:54.18:807,54,0
chr10	17125381	.	CG	C	3734.45	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=12.056;DP=583;FS=19.245;HRun=1;HaplotypeScore=70.9063;InbreedingCoeff=0.9984;MQ=81.85;MQ0=0;MQRankSum=-4.318;QD=35.57;ReadPosRankSum=-0.210;VQSLOD=1.8104;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,14:15:39.13:543,39,0	0/0:9,0:9:24.08:0,24,383	0/0:17,0:17:48.10:0,48,729	0/0:17,0:17:48.13:0,48,736	0/0:17,0:17:51.17:0,51,814	0/0:21,0:21:60.20:0,60,959	0/0:26,0:26:78.27:0,78,1241	0/0:25,0:25:75.21:0,75,1153	0/0:27,0:27:81.28:0,81,1291	0/0:23,0:23:69.24:0,69,1099	0/0:21,0:21:60.18:0,60,933	1/1:0,29:29:81.27:1129,81,0	1/1:3,10:13:39.12:525,39,0	1/1:1,7:8:24.07:318,24,0	0/0:36,0:36:99:0,108,1651	0/0:20,0:20:60.18:0,60,913	0/0:31,0:31:93.32:0,93,1469	0/0:24,0:24:72.25:0,72,1150	0/0:23,0:23:66.22:0,66,1018	0/0:23,0:23:66.20:0,66,1007	0/0:44,0:44:99:0,129,1970	1/1:2,9:11:27.08:359,27,0	1/1:1,15:16:36.10:485,36,0	1/1:1,12:13:27.09:375,27,0	0/0:11,0:11:33.08:0,33,480	0/0:31,0:31:93.31:0,93,1463	0/0:24,0:23:72.24:0,72,1125	0/0:8,0:8:24.08:0,24,373
chr10	17125416	.	CG	C	4538.12	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=11.909;DP=587;FS=2.815;HRun=1;HaplotypeScore=74.3464;InbreedingCoeff=0.9934;MQ=84.49;MQ0=0;MQRankSum=-8.764;QD=38.14;ReadPosRankSum=-1.219;VQSLOD=4.9186;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,22:23:66.22:920,66,0	0/0:7,0:7:21.07:0,21,319	0/0:16,0:16:48.16:0,48,730	0/0:22,0:22:62.78:0,63,849	0/0:17,0:17:51.16:0,51,791	0/0:24,0:24:69.24:0,69,1100	0/0:29,0:29:87.24:0,87,1321	0/0:23,0:23:69.23:0,69,1090	0/0:27,0:27:78.22:0,78,1218	0/0:23,0:23:69.24:0,69,1102	0/0:18,0:18:48.16:0,48,763	1/1:1,22:23:66.22:920,66,0	1/1:1,10:11:33.09:443,33,0	1/1:0,10:10:30.10:413,30,0	0/0:36,0:36:99:0,105,1672	0/0:26,0:26:78.25:0,78,1223	0/0:30,0:30:87.30:0,87,1372	0/0:25,0:25:75.19:0,75,1144	0/0:24,0:24:69.24:0,69,1102	0/0:16,0:16:48.15:0,48,738	0/0:44,0:44:99:0,126,1995	1/1:2,12:14:33.11:460,33,0	1/1:1,18:19:54.18:754,54,0	1/1:1,18:19:45.15:629,45,0	0/0:12,0:12:33.11:0,33,527	0/0:19,0:19:57.16:0,57,839	0/0:26,0:26:78.25:0,78,1206	0/0:4,0:4:12.04:0,12,192
chr10	17125484	.	TG	T	7440.40	PASS	AB=0.753;AC=38;AF=0.679;AN=56;BaseQRankSum=-2.604;DP=558;FS=0.848;HRun=10;HaplotypeScore=69.2074;InbreedingCoeff=0.8128;MQ=78.38;MQ0=0;MQRankSum=-0.834;QD=18.02;ReadPosRankSum=1.626;VQSLOD=5.5300;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:22,2:24:16.02:16,0,287	1/1:0,4:4:12:104,12,0	0/0:20,0:19:15.83:0,16,245	0/0:17,0:16:2.18:0,2,130	0/1:4,10:14:0.19:227,0,0	1/1:6,11:17:29.99:260,30,0	1/1:6,18:24:44.98:391,45,0	1/1:8,21:30:55.97:468,56,0	1/1:3,23:26:65.98:573,66,0	1/1:5,11:17:7.83:282,8,0	1/1:1,7:8:20.95:182,21,0	0/0:20,0:20:48.13:0,48,528	0/0:18,0:18:48.13:0,48,531	0/0:20,1:21:28.09:0,28,537	1/1:6,27:33:83.98:729,84,0	1/1:7,19:27:59:501,59,0	1/1:9,26:35:77.96:677,78,0	1/1:8,15:23:50.97:443,51,0	1/1:6,13:20:43.91:355,44,0	1/1:0,8:8:21:182,21,0	1/1:7,31:38:92.98:807,93,0	0/0:14,1:16:10.03:0,10,331	0/0:13,0:13:27.07:0,27,299	0/0:19,0:19:46.29:0,46,474	1/1:4,6:10:17.99:156,18,0	1/1:6,19:25:29.79:483,30,0	1/1:7,17:24:53.98:469,54,0	1/1:0,5:6:17.03:136,17,0
chr10	17127442	.	G	GCTCT	3438.55	PASS	AB=1.000;AC=31;AF=0.620;AN=50;BaseQRankSum=3.143;DP=576;FS=22.625;HRun=0;HaplotypeScore=134.6612;InbreedingCoeff=0.7680;MQ=60.25;MQ0=5;MQRankSum=-0.210;QD=11.13;ReadPosRankSum=-2.869;VQSLOD=1.3759;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:24,2:25:20.58:353,21,0	1/1:5,0:5:9.03:153,9,0	0/0:24,0:17:6.02:0,6,83	./.	1/1:13,0:14:3.01:43,3,0	0/1:18,0:19:48.71:49,0,227	0/0:24,0:32:35.62:0,36,571	0/0:29,0:28:12.03:0,12,168	1/1:19,0:20:5.90:78,6,0	1/1:26,0:25:32.56:426,33,0	./.	1/1:13,1:14:5.81:84,6,0	1/1:15,2:18:17.80:348,18,0	1/1:12,5:17:12.04:285,12,0	1/1:9,0:24:5.72:100,6,0	0/0:18,0:23:39.07:0,39,509	1/1:17,0:17:9.03:139,9,0	0/0:17,0:17:30.10:0,30,471	0/0:19,0:19:18.05:0,18,256	0/0:9,0:19:12.01:0,12,112	0/0:37,0:39:48:0,48,643	1/1:15,3:19:14.79:274,15,0	1/1:12,5:18:14.31:270,14,0	1/1:14,5:19:20.73:403,21,0	0/0:11,0:13:15.04:0,15,197	1/1:23,0:22:16.86:229,17,0	1/1:27,0:28:11.91:203,12,0	./.
chr10	17127496	.	G	GGT	1625.37	PASS	AB=0.707;AC=12;AF=0.214;AN=56;BaseQRankSum=6.469;DP=602;FS=0.000;HRun=0;HaplotypeScore=151.7987;InbreedingCoeff=0.7462;MQ=47.81;MQ0=24;MQRankSum=-3.357;QD=13.89;ReadPosRankSum=-0.666;VQSLOD=3.4275;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,10:19:27.04:394,27,0	0/0:9,0:9:18.05:0,18,217	0/0:38,0:15:18.58:0,19,193	0/0:38,0:20:26.59:0,27,328	0/0:13,0:14:21.06:0,21,254	0/0:33,0:33:55.41:0,55,585	0/0:30,0:27:44.91:0,45,505	0/0:31,0:32:35.66:0,36,339	0/0:15,0:14:11.99:0,12,122	0/0:21,0:18:39.07:0,39,444	0/0:14,0:14:20.96:0,21,245	1/1:8,6:14:12.44:311,12,0	1/1:8,5:13:20.40:231,20,0	1/1:12,10:22:32.19:406,32,0	0/0:22,0:22:29.90:0,30,364	0/0:23,0:22:41.99:0,42,462	0/0:14,0:12:24.96:0,25,293	0/0:16,0:16:24.82:0,25,334	0/0:32,0:29:39.10:0,39,460	0/0:21,0:21:23.57:0,24,243	0/0:56,0:55:68.47:0,68,748	0/1:9,8:16:27.53:88,0,28	1/1:5,4:9:9.03:145,9,0	0/1:14,7:22:15.44:227,0,15	0/0:11,0:11:14.84:0,15,164	0/0:19,0:18:41.95:0,42,475	0/0:14,0:14:29.97:0,30,315	0/0:4,0:4:9.03:0,9,112
chr10	17127528	.	GGT	G	1175.52	PASS	AB=0.941;AC=13;AF=0.232;AN=56;BaseQRankSum=5.800;DP=541;FS=0.000;HRun=0;HaplotypeScore=140.2746;InbreedingCoeff=0.7711;MQ=40.38;MQ0=31;MQRankSum=-1.884;QD=10.69;ReadPosRankSum=2.184;VQSLOD=3.5213;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:15,4:18:20.59:309,21,0	0/0:7,0:7:15.05:0,15,229	0/0:48,0:17:32.66:0,33,554	0/0:58,0:14:27.02:0,27,370	0/0:8,0:7:15.05:0,15,242	0/0:26,0:26:36.09:0,36,495	0/0:28,0:25:30:0,30,388	0/0:25,0:22:41.94:0,42,586	0/0:12,0:11:11.94:0,12,113	0/0:18,0:18:41.25:0,41,535	0/0:13,0:13:21.94:0,22,306	0/1:15,1:16:26.67:197,0,27	1/1:6,2:8:9.17:110,9,0	1/1:17,5:21:28.93:400,29,0	0/0:20,0:20:29.63:0,30,471	0/0:15,0:14:32.91:0,33,401	0/0:17,0:15:24.67:0,25,369	0/0:11,0:10:20.98:0,21,323	0/0:31,0:27:72.13:0,72,1038	0/0:16,0:16:20.93:0,21,266	0/0:41,0:38:41.55:0,42,554	1/1:14,2:16:1.66:111,2,0	1/1:9,0:9:5.05:80,5,0	1/1:18,2:20:11.96:141,12,0	0/0:6,0:6:5.98:0,6,86	0/0:15,0:15:44.72:0,45,608	0/0:12,0:12:26.95:0,27,301	0/0:4,0:4:11.97:0,12,134
chr10	17127533	.	GTGGTGTGTGTGTGTGT	G	2545.30	PASS	AB=0.841;AC=10;AF=0.179;AN=56;BaseQRankSum=5.967;DP=556;FS=1.897;HRun=0;HaplotypeScore=214.1838;InbreedingCoeff=0.0031;MQ=39.04;MQ0=38;MQRankSum=-2.170;QD=16.21;ReadPosRankSum=2.462;VQSLOD=2.6194;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:13,2:18:99:402,0,120	0/0:5,0:5:15.05:0,15,415	0/0:47,0:16:32.77:0,33,615	0/0:56,0:12:27.03:0,27,518	0/0:10,0:9:15.05:0,15,292	0/0:26,0:26:16.34:0,16,566	0/1:32,0:28:3.71:4,0,390	0/0:32,0:28:67.61:0,68,1209	0/0:12,0:11:2.87:0,3,237	0/0:18,0:18:44.98:0,45,946	0/0:13,0:13:21.94:0,22,407	0/1:12,2:15:99:575,0,191	0/1:7,1:9:28.12:282,0,28	0/1:14,6:21:57.21:810,0,57	0/0:20,0:20:34.97:0,35,898	0/1:15,0:14:12.25:12,0,458	0/0:18,0:15:36.11:0,36,725	0/0:11,0:10:30.10:0,30,557	0/0:32,0:28:61.32:0,61,1078	0/0:13,1:14:24.33:0,24,377	0/0:44,0:38:46.95:0,47,585	0/1:13,2:15:99:125,0,153	0/1:6,1:9:66.58:72,0,67	1/1:8,10:19:11.95:407,12,0	0/0:6,0:5:8.92:0,9,188	0/0:17,0:17:48.06:0,48,1048	0/0:13,0:13:33.07:0,33,713	0/0:4,0:4:12.04:0,12,294
chr10	17127535	.	GGTGTGTGTGTGT	G	2708.17	PASS	AB=0.894;AC=16;AF=0.286;AN=56;BaseQRankSum=0.351;DP=559;FS=0.000;HRun=0;HaplotypeScore=190.0033;InbreedingCoeff=-0.3115;MQ=38.62;MQ0=41;MQRankSum=0.426;QD=7.85;ReadPosRankSum=1.407;VQSLOD=2.6360;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:20,0:18:70.12:70,0,165	0/0:5,0:5:9.03:0,9,160	0/1:44,0:16:3.53:4,0,47	0/0:54,0:11:3.01:0,3,61	0/0:6,0:9:2.99:0,3,23	0/1:11,14:25:46.11:118,0,46	0/1:20,12:27:78:329,0,78	0/1:27,0:28:99:318,0,869	0/1:8,3:11:48.59:211,0,49	0/0:14,0:19:17.85:0,18,220	0/0:9,0:12:3.01:0,3,43	0/1:18,0:16:99:302,0,231	0/1:9,0:9:49.72:105,0,50	0/1:22,0:21:76.54:268,0,77	0/0:18,0:20:14.58:0,15,227	0/1:11,3:14:42.98:294,0,43	0/0:14,0:16:18.06:0,18,253	0/1:12,0:10:27.27:27,0,160	0/1:21,9:27:21.62:477,0,22	0/0:7,6:13:3.44:0,3,97	0/1:41,2:36:27.32:149,0,27	0/0:14,0:15:4.56:0,5,158	0/0:9,0:9:2.71:0,3,63	1/1:19,0:19:8.95:178,9,0	0/1:7,1:7:8.37:8,0,55	0/0:14,0:17:20.93:0,21,259	0/0:5,0:13:18.05:0,18,227	0/0:5,0:5:11.52:0,12,110
chr10	17127558	.	GT	G	311.23	PASS	AB=0.988;AC=6;AF=0.107;AN=56;BaseQRankSum=6.166;DP=624;FS=0.997;HRun=1;HaplotypeScore=146.5271;InbreedingCoeff=0.1367;MQ=30.03;MQ0=66;MQRankSum=-3.985;QD=3.80;ReadPosRankSum=5.101;VQSLOD=0.4914;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:19,1:14:25.82:26,0,87	0/0:6,0:4:9.03:0,9,114	0/0:60,0:7:14.96:0,15,167	0/0:72,0:5:15.05:0,15,185	0/0:14,0:12:6.01:0,6,63	0/0:23,0:22:18.33:0,18,198	0/0:33,0:26:14.74:0,15,212	0/0:47,0:37:95.49:0,95,1211	0/0:12,0:11:14.17:0,14,181	0/0:24,0:19:34.95:0,35,393	0/0:13,0:13:5.08:0,5,75	0/1:16,0:14:85.66:86,0,116	0/1:10,0:9:23.93:24,0,44	0/1:17,0:16:26.33:178,0,26	0/0:22,0:17:28.67:0,29,316	0/0:18,0:17:18.63:0,19,222	0/0:19,0:15:21.96:0,22,239	0/0:12,0:9:24.07:0,24,295	0/0:26,0:22:57.52:0,58,665	0/0:11,0:11:7.92:0,8,70	0/0:51,0:36:24.03:0,24,281	0/0:13,0:10:9.42:0,9,123	0/0:12,0:9:8.05:0,8,85	1/1:17,2:18:8.58:121,9,0	0/0:14,1:13:13.47:0,13,156	0/0:21,0:18:36.62:0,37,399	0/0:11,0:11:10.80:0,11,79	0/0:7,0:6:13.39:0,13,150
chr10	17127560	.	GT	G	240.97	PASS	AB=0.939;AC=9;AF=0.161;AN=56;BaseQRankSum=4.589;DP=614;FS=2.068;HRun=1;HaplotypeScore=144.2849;InbreedingCoeff=-0.0063;MQ=29.26;MQ0=66;MQRankSum=-1.518;QD=1.70;ReadPosRankSum=3.294;VQSLOD=-0.5896;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:17,1:12:20.85:21,0,108	0/0:6,0:4:9.03:0,9,114	0/0:59,1:7:10.27:0,10,113	0/0:76,0:5:15.01:0,15,171	0/0:15,0:13:9.02:0,9,101	0/1:21,1:21:24.69:25,0,131	0/1:29,1:24:22.66:23,0,160	0/0:48,0:36:36.38:0,36,935	0/0:12,0:11:14.17:0,14,179	0/0:22,0:17:31.98:0,32,373	0/0:13,0:13:5.26:0,5,75	0/1:14,1:13:82.18:82,0,118	0/1:8,1:8:12.02:12,0,44	0/1:14,2:15:25.82:136,0,26	0/0:21,0:16:25.13:0,25,256	0/0:16,2:17:8.09:0,8,113	0/0:19,0:15:21.52:0,22,249	0/0:12,0:9:23.08:0,23,258	0/0:23,0:20:43.41:0,43,479	0/1:11,0:11:17.88:18,0,46	0/0:50,1:36:18.61:0,19,168	0/0:12,0:9:9.42:0,9,123	0/0:12,0:9:5.67:0,6,77	1/1:20,0:19:8.41:64,8,0	0/0:16,0:14:11.71:0,12,125	0/0:19,0:16:33.62:0,34,373	0/0:10,0:10:10.80:0,11,79	0/0:7,0:6:13.39:0,13,149
chr10	17127586	.	TGGG	T	494.99	PASS	AB=0.916;AC=13;AF=0.232;AN=56;BaseQRankSum=3.831;DP=508;FS=3.220;HRun=4;HaplotypeScore=121.7976;InbreedingCoeff=-0.2340;MQ=25.18;MQ0=51;MQRankSum=-1.348;QD=2.54;ReadPosRankSum=-1.674;VQSLOD=-0.5945;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:7:4.26:0,4,42	0/0:4,0:2:3.01:0,3,49	0/0:84,0:9:16.21:0,16,271	0/0:76,0:6:15.05:0,15,301	0/0:19,0:17:6.02:0,6,123	0/0:12,0:11:0.47:0,0,1	0/1:19,2:17:99:123,0,125	0/0:18,0:10:21.07:0,21,445	0/1:6,0:6:23.17:23,0,171	0/1:26,1:22:8.56:9,0,895	0/0:11,0:10:3.85:0,4,22	0/1:5,4:9:11.28:80,0,11	0/0:6,0:5:5.69:0,6,31	0/1:10,1:11:28.45:28,0,57	0/0:13,0:9:13.13:0,13,125	0/1:13,0:13:99:116,0,137	0/1:13,1:12:56.28:56,0,345	0/0:4,0:4:11.07:0,11,208	0/1:17,0:15:14.58:15,0,551	0/1:10,0:10:16.14:42,0,16	0/1:35,0:25:0.49:0,0,243	0/1:10,1:8:14.36:36,0,14	0/1:6,1:4:0:0,0,0	0/0:16,0:15:8.64:0,9,50	0/1:9,2:10:97.56:104,0,98	0/0:18,0:15:30.01:0,30,539	0/0:12,0:12:29.98:0,30,439	0/0:6,0:5:11.89:0,12,91
chr10	17127611	.	TGCGCGC	T	3461	PASS	AB=0.919;AC=36;AF=0.643;AN=56;BaseQRankSum=-4.188;DP=337;FS=10.956;HRun=0;HaplotypeScore=123.6447;InbreedingCoeff=-0.1172;MQ=45.79;MQ0=7;MQRankSum=2.865;QD=12.19;ReadPosRankSum=-2.371;VQSLOD=1.5132;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,3:5:3.01:70,3,0	0/0:3,1:4:3:0,3,25	0/1:28,1:10:50.55:51,0,281	0/0:26,0:7:9.01:0,9,185	0/1:14,2:17:15.36:78,0,15	1/1:10,1:10:9.03:182,9,0	1/1:13,5:17:7.97:156,8,0	1/1:5,5:10:26.88:366,27,0	0/1:5,0:5:1.82:29,0,2	0/1:18,1:19:20.41:267,0,20	0/0:10,1:11:2.58:0,3,34	1/1:4,1:4:5.91:61,6,0	1/1:4,1:5:3.48:53,3,0	1/1:2,1:4:6.02:100,6,0	0/1:10,0:8:31.54:60,0,32	1/1:14,0:14:19.74:374,20,0	0/1:13,1:13:79.44:84,0,79	1/1:6,0:6:0.38:129,0,0	0/1:9,0:9:43.61:134,0,44	0/1:14,0:13:4.36:117,0,4	1/1:16,0:15:5.28:49,5,0	1/1:12,1:13:15.05:315,15,0	1/1:6,0:4:5.70:141,6,0	0/0:12,0:12:3.41:0,3,19	0/1:8,5:13:36.56:144,0,37	0/1:16,3:19:99:245,0,116	0/1:10,0:10:90.56:91,0,103	0/1:5,2:7:4.91:165,0,5
chr10	17127633	.	G	GT	1416.85	PASS	AB=0.778;AC=14;AF=0.250;AN=56;BaseQRankSum=-2.907;DP=372;FS=2.732;HRun=11;HaplotypeScore=119.2332;InbreedingCoeff=0.7547;MQ=62.22;MQ0=0;MQRankSum=-1.040;QD=12.76;ReadPosRankSum=-2.929;VQSLOD=2.5855;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:6,12:16:20.92:189,21,0	0/0:5,0:5:11.95:0,12,92	0/0:17,0:10:9.85:0,10,57	0/0:11,0:8:13.23:0,13,74	0/1:20,1:22:2.05:2,0,223	0/0:5,0:13:21.16:0,21,67	0/0:4,0:21:37.92:0,38,118	0/0:17,0:18:33.94:0,34,244	0/0:7,0:7:14.83:0,15,107	0/0:17,0:17:35.83:0,36,277	0/0:14,0:14:29.31:0,29,227	1/1:0,9:10:17.18:207,17,0	1/1:1,6:7:9.02:91,9,0	0/1:4,8:12:16.29:206,0,16	0/0:8,0:7:11.78:0,12,84	0/0:2,0:17:24.43:0,24,71	0/0:11,0:11:23.90:0,24,183	0/0:0,0:7:8.15:0,8,24	0/0:11,0:12:4.32:0,4,168	0/0:12,0:12:29.84:0,30,231	0/0:12,0:12:26.74:0,27,190	1/1:5,15:20:54.04:520,54,0	1/1:2,12:14:30.47:293,30,0	1/1:3,5:8:9.02:90,9,0	0/0:6,0:16:18.71:0,19,60	0/0:21,0:20:29.08:0,29,225	0/0:14,0:14:26.26:0,26,198	0/0:8,0:8:17.71:0,18,129
chr10	17128581	.	C	CT	1241.04	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=13.100;DP=601;FS=67.064;HRun=1;HaplotypeScore=164.2142;InbreedingCoeff=0.9937;MQ=86.85;MQ0=0;MQRankSum=-12.297;QD=13.79;ReadPosRankSum=3.010;VQSLOD=0.3759;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,6:16:16.87:164,17,0	0/0:19,0:19:57.19:0,57,797	0/0:19,0:19:56.52:0,57,715	0/0:25,0:25:58.50:0,58,841	0/0:14,0:14:39.10:0,39,525	0/0:16,0:16:42.14:0,42,587	0/0:31,0:31:93.26:0,93,1244	0/0:30,0:30:87.25:0,87,1178	0/0:31,0:31:93.31:0,93,1301	0/0:23,0:23:66.22:0,66,922	0/0:19,0:19:54.18:0,54,753	1/1:15,0:15:39.63:298,40,0	1/1:12,1:15:37.60:249,38,0	1/1:12,0:12:24.01:203,24,0	0/0:32,0:32:96.32:0,96,1343	0/0:31,0:31:93.31:0,93,1299	0/0:30,0:30:90.30:0,90,1257	0/0:23,0:23:63.21:0,63,877	0/0:18,0:18:54.14:0,54,704	0/0:20,0:20:54.18:0,54,752	0/0:43,0:43:99:0,120,1658	1/1:5,1:6:14.93:145,15,0	1/1:10,1:11:26.65:196,27,0	1/1:10,5:15:21.18:184,21,0	0/0:17,0:16:51.16:0,51,696	0/0:26,0:26:75.25:0,75,1048	0/0:32,0:32:96.32:0,96,1342	0/0:12,0:12:36.12:0,36,503
chr10	17129728	.	A	ATGGTGG	2317.99	PASS	AB=0.932;AC=16;AF=0.286;AN=56;BaseQRankSum=-2.730;DP=733;FS=6.358;HRun=0;HaplotypeScore=187.9988;InbreedingCoeff=0.4624;MQ=63.16;MQ0=11;MQRankSum=0.920;QD=7.45;ReadPosRankSum=1.213;VQSLOD=2.0689;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:41,0:40:5.94:6,0,595	0/0:7,0:7:6.02:0,6,100	0/0:19,0:12:8.23:0,8,147	0/0:21,0:18:16.62:0,17,434	0/0:26,0:25:42.13:0,42,628	1/1:3,19:24:15.05:410,15,0	1/1:29,0:29:41.56:847,42,0	0/0:33,0:33:36.64:0,37,901	0/1:8,0:26:33.02:61,0,33	0/0:37,0:37:72.68:0,73,1152	0/0:13,0:13:15.05:0,15,249	0/0:29,0:28:36.29:0,36,575	0/0:38,0:38:45.31:0,45,809	0/1:30,0:30:65.62:66,0,468	0/0:31,0:31:57.19:0,57,974	1/1:3,24:29:12.04:403,12,0	0/0:24,0:24:42.12:0,42,621	1/1:5,27:34:15.05:320,15,0	0/0:33,0:32:54.04:0,54,778	0/0:13,0:12:24.08:0,24,382	0/0:32,0:31:64.74:0,65,1117	0/1:25,0:24:36.12:36,0,343	0/1:19,0:19:3.38:3,0,286	0/1:35,0:35:24.05:24,0,819	1/1:1,16:18:12:322,12,0	0/0:31,0:31:66.18:0,66,1087	0/0:27,0:27:49.94:0,50,812	0/0:8,0:8:14.34:0,14,172
chr10	17129740	.	GTGATGATGATGA	G	6158.48	PASS	AC=18;AF=0.346;AN=52;BaseQRankSum=9.222;DP=707;FS=15.353;HRun=0;HaplotypeScore=239.3951;InbreedingCoeff=0.9332;MQ=58.86;MQ0=12;MQRankSum=-5.220;QD=31.26;ReadPosRankSum=-0.052;VQSLOD=2.9498;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:36:57.18:0,57,2706	1/1:2,4:6:3.01:104,3,0	./.	./.	1/1:15,13:27:9.03:260,9,0	0/0:28,0:28:30.10:0,30,1449	0/0:26,0:26:26.92:0,27,1135	0/0:34,0:34:45.14:0,45,1360	0/0:25,0:25:27.09:0,27,1360	1/1:18,15:33:45.13:1101,45,0	1/1:5,11:17:15.05:454,15,0	0/0:22,0:21:48.16:0,48,2246	0/0:38,0:38:78.27:0,78,3818	0/0:31,0:31:57.20:0,57,2504	1/1:11,17:29:51.17:1579,51,0	0/0:29,0:29:21.07:0,21,1141	1/1:13,8:21:12.04:415,12,0	0/0:34,0:33:24.08:0,24,1055	0/0:28,0:26:24.08:0,24,1286	0/0:17,0:16:33.11:0,33,1606	0/0:26,0:26:39.13:0,39,1942	0/0:27,0:26:39.12:0,39,1639	0/0:14,0:14:33.11:0,33,1347	0/0:37,0:37:84.09:0,84,3996	0/0:21,0:21:18.06:0,18,929	1/1:17,13:30:39.05:824,39,0	1/1:7,15:22:36.12:1237,36,0	1/1:4,7:11:6.02:184,6,0
chr10	17130949	.	TC	T	5894.53	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=13.411;DP=666;FS=1.511;HRun=1;HaplotypeScore=65.2015;InbreedingCoeff=0.9934;MQ=83.57;MQ0=0;MQRankSum=-1.246;QD=38.28;ReadPosRankSum=1.725;VQSLOD=5.4957;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,135,2157	1/1:0,6:6:18.06:252,18,0	0/0:27,0:27:81.24:0,81,1250	0/0:19,0:19:33.76:0,34,705	1/1:0,20:20:60.16:817,60,0	0/0:16,0:16:48.14:0,48,741	0/0:28,0:28:84.29:0,84,1343	0/0:36,0:36:99:0,108,1703	0/0:30,0:30:90.31:0,90,1435	1/1:1,22:23:66.21:899,66,0	1/1:0,11:11:30.10:420,30,0	0/0:19,0:19:57.19:0,57,911	0/0:24,0:24:72.25:0,72,1150	0/0:14,0:14:39.12:0,39,600	1/1:0,23:23:60.20:839,60,0	0/0:30,0:30:90.29:0,90,1416	1/1:1,21:22:12.35:749,12,0	0/0:31,0:30:84.29:0,84,1343	0/0:37,0:37:99:0,111,1755	0/0:21,0:21:60.19:0,60,936	0/0:52,0:52:99:0,157,2463	0/0:20,0:20:57.18:0,57,888	0/0:11,0:11:30.05:0,30,406	0/0:38,0:38:99:0,114,1819	0/0:13,0:13:39.09:0,39,571	1/1:0,17:17:51.12:660,51,0	1/1:0,25:25:69.23:965,69,0	1/1:0,7:7:21.07:294,21,0
chr10	17133211	.	TGTGTGTGA	T	3048.73	PASS	AB=1.000;AC=29;AF=0.537;AN=54;BaseQRankSum=12.091;DP=726;FS=20.255;HRun=0;HaplotypeScore=215.2743;InbreedingCoeff=0.0981;MQ=60.41;MQ0=19;MQRankSum=-4.583;QD=6.94;ReadPosRankSum=1.377;VQSLOD=1.3514;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:44.31:0,44,345	1/1:6,0:6:5.21:47,5,0	0/0:51,0:21:38.25:0,38,490	0/0:54,0:30:71.64:0,72,794	1/1:15,0:14:0.45:1,0,0	0/1:16,0:16:75.92:94,0,76	0/1:24,0:24:20.87:21,0,116	0/0:19,0:19:41.21:0,41,444	0/1:31,0:31:99:175,0,148	1/1:35,2:37:60.96:635,61,0	1/1:8,1:9:3.40:18,3,0	0/1:26,0:26:99:131,0,181	0/1:23,0:23:99:122,0,102	0/1:33,0:31:91.29:91,0,194	1/1:28,0:28:11.27:110,11,0	0/1:23,0:23:97.04:232,0,97	1/1:32,0:32:38.75:408,39,0	0/1:21,0:20:31.58:32,0,122	0/0:19,0:18:6.85:0,7,275	0/1:18,0:18:29.52:30,0,88	0/0:60,0:59:30.13:0,30,238	0/1:13,0:13:48.24:96,0,48	./.	0/0:36,0:36:25.31:0,25,299	0/1:24,0:24:56.70:57,0,106	1/1:31,1:32:31.31:588,31,0	1/1:14,1:14:14.58:196,15,0	1/1:13,0:13:16.23:147,16,0
chr10	17133213	.	TGTGTGA	T	5058.13	PASS	AB=1.000;AC=30;AF=0.556;AN=54;BaseQRankSum=12.050;DP=719;FS=17.873;HRun=0;HaplotypeScore=189.5935;InbreedingCoeff=0.0607;MQ=59.70;MQ0=19;MQRankSum=-5.283;QD=10.76;ReadPosRankSum=0.887;VQSLOD=2.6022;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:37,0:37:27.41:27,0,273	1/1:0,6:6:6.45:89,6,0	0/0:50,0:20:38.25:0,38,452	0/0:54,0:30:71.51:0,72,740	1/1:3,13:14:0.47:1,0,0	0/1:17,0:17:52.09:52,0,76	0/1:21,0:21:6.58:7,0,97	0/0:18,0:18:41.87:0,42,404	0/1:31,0:31:57.35:57,0,147	1/1:7,27:34:73.93:822,74,0	1/1:2,7:9:2.92:17,3,0	0/1:28,0:28:99:234,0,124	0/1:22,0:22:89.83:426,0,90	0/1:33,0:31:99:302,0,181	1/1:8,22:30:23.91:355,24,0	0/1:23,0:23:97.16:135,0,97	1/1:32,0:32:47.19:569,47,0	0/1:21,0:20:17.36:17,0,147	0/0:19,0:18:26.09:0,26,329	0/1:17,0:17:15.53:16,0,88	0/0:59,0:58:32.79:0,33,261	0/1:12,0:12:44.53:63,0,45	./.	0/0:37,0:37:25.15:0,25,300	0/1:22,0:22:28.78:29,0,106	1/1:2,31:33:88.62:1155,89,0	1/1:1,12:13:18.02:350,18,0	1/1:2,11:13:18.01:334,18,0
chr10	17133219	.	AGTGTGTGTGTGT	A	1772.17	PASS	AB=0.708;AC=19;AF=0.339;AN=56;BaseQRankSum=-0.426;DP=701;FS=2.236;HRun=0;HaplotypeScore=239.8265;InbreedingCoeff=0.3283;MQ=53.53;MQ0=24;MQRankSum=-3.379;QD=6.20;ReadPosRankSum=2.791;VQSLOD=2.0587;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:39:17.98:0,18,225	0/0:7,0:6:6.82:0,7,53	0/0:44,0:14:3.01:0,3,66	0/0:49,0:25:17.05:0,17,217	0/0:17,0:15:2.66:0,3,48	1/1:4,10:15:9.03:314,9,0	0/1:7,16:23:11.96:99,0,12	1/1:18,0:17:8.84:176,9,0	0/0:14,0:34:6.06:0,6,80	0/1:33,0:33:26.46:26,0,495	1/1:8,0:8:1.36:2,1,0	0/1:8,0:24:26.01:26,0,324	0/0:6,0:22:32.27:0,32,409	0/0:14,0:31:28.36:0,28,325	0/0:29,0:29:24.92:0,25,321	1/1:7,16:24:13.42:769,13,0	0/0:33,0:33:29.62:0,30,275	1/1:10,12:21:9.01:176,9,0	0/1:17,0:17:12.34:47,0,12	0/1:9,6:16:8.91:78,0,9	0/1:23,30:52:6.76:38,0,7	0/0:6,0:13:5.38:0,5,86	0/1:1,0:11:0:0,0,0	0/0:22,0:36:2.57:0,3,24	1/1:9,9:20:6.02:188,6,0	0/0:32,0:32:69.43:0,69,887	0/0:13,0:12:13.71:0,14,187	0/0:12,0:12:15.04:0,15,181
chr10	17133584	.	AAC	A	3822.72	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-6.814;DP=741;FS=8.151;HRun=0;HaplotypeScore=158.7029;InbreedingCoeff=0.7803;MQ=55.98;MQ0=12;MQRankSum=8.966;QD=16.13;ReadPosRankSum=8.596;VQSLOD=2.4202;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:42:5.26:0,5,47	1/1:3,3:7:0.92:72,1,0	0/0:36,0:20:3.01:0,3,46	0/0:40,0:20:10.17:0,10,112	1/1:6,16:26:47.35:475,47,0	0/0:20,0:19:8.74:0,9,62	0/0:27,0:27:8.64:0,9,79	0/0:37,0:38:53.47:0,53,459	1/1:6,0:23:25.57:125,26,0	1/1:9,12:18:2.13:377,2,0	1/1:2,10:14:23.57:214,24,0	0/0:17,0:41:23.48:0,23,196	0/0:7,0:28:20.17:0,20,146	0/0:15,0:44:29.28:0,29,217	1/1:7,25:34:35.07:610,35,0	0/0:26,0:26:20.96:0,21,173	1/1:16,16:34:4.14:444,4,0	0/0:13,0:13:6.39:0,6,39	0/0:11,0:18:20.79:0,21,177	0/0:9,0:14:9:0,9,90	0/0:19,0:19:2.19:0,2,23	0/0:5,0:21:26.73:0,27,218	0/0:9,0:16:8.83:0,9,92	0/0:33,0:35:22.35:0,22,153	0/0:20,0:20:17.99:0,18,158	1/1:8,28:36:83.78:882,84,0	1/1:6,17:25:40.70:436,41,0	1/1:3,9:13:17.88:186,18,0
chr10	17133594	.	C	CACACACACACAT	8303.97	PASS	AB=0.963;AC=22;AF=0.393;AN=56;BaseQRankSum=-2.601;DP=759;FS=11.135;HRun=0;HaplotypeScore=251.8508;InbreedingCoeff=0.1077;MQ=55.33;MQ0=10;MQRankSum=-10.231;QD=18.25;ReadPosRankSum=1.814;VQSLOD=2.3918;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:44,0:44:99:267,0,100	0/1:8,0:8:9.96:10,0,221	0/0:26,0:14:17.96:0,18,189	0/0:33,0:17:20.69:0,21,461	0/0:27,0:26:57.50:0,58,1259	1/1:4,13:24:9.03:503,9,0	0/1:6,14:32:1.27:190,0,1	0/1:39,0:36:99:551,0,183	0/0:25,0:25:27.13:0,27,699	0/0:27,0:24:41.06:0,41,1172	0/0:15,0:14:27.08:0,27,702	0/1:40,0:40:71.05:840,0,71	0/1:28,0:28:12.81:937,0,13	0/1:37,0:37:50.80:768,0,51	0/0:35,0:35:78.07:0,78,1623	1/1:5,18:32:13.43:1099,13,0	0/0:33,0:32:69.11:0,69,1537	1/1:12,0:12:10.65:145,11,0	0/1:18,0:17:24.31:584,0,24	0/1:15,0:15:55.64:56,0,61	0/1:27,0:27:92.47:92,0,99	1/1:20,0:20:5.87:846,6,0	0/1:15,0:15:84.58:85,0,118	0/1:39,0:38:99:297,0,145	1/1:0,18:24:18.06:1034,18,0	0/0:39,0:37:99:0,102,2120	0/0:24,0:24:47.63:0,48,1135	0/0:17,0:17:36:0,36,699
chr10	17133831	.	GGT	G	3660.95	PASS	AB=0.726;AC=19;AF=0.339;AN=56;BaseQRankSum=6.432;DP=743;FS=1.384;HRun=0;HaplotypeScore=105.3047;InbreedingCoeff=0.5254;MQ=56.78;MQ0=4;MQRankSum=3.517;QD=12.24;ReadPosRankSum=2.014;VQSLOD=3.5185;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:37,7:44:27.26:27,0,849	1/1:3,3:7:11.87:116,12,0	0/0:26,0:20:13.95:0,14,135	0/0:31,0:19:12.03:0,12,161	1/1:9,14:25:39.11:443,39,0	0/0:12,0:25:3:0,3,26	0/0:10,0:19:2.72:0,3,24	0/0:37,0:37:27.93:0,28,325	0/1:11,12:23:19.20:225,0,19	0/1:18,14:31:24.82:408,0,25	1/1:8,7:16:20.89:217,21,0	0/0:22,0:22:48.15:0,48,712	0/1:19,6:25:28.53:29,0,442	0/0:29,1:30:29.06:0,29,744	1/1:7,18:26:53.99:591,54,0	0/0:14,0:23:14.76:0,15,129	1/1:12,21:33:45.13:510,45,0	0/0:10,0:17:11.71:0,12,95	0/0:17,0:27:27.04:0,27,219	0/0:14,0:19:14.99:0,15,127	0/0:25,0:49:26.94:0,27,235	0/0:28,2:30:23.12:0,23,769	0/0:25,0:25:47.87:0,48,657	0/0:36,2:37:38.14:0,38,990	0/0:13,0:24:5.98:0,6,69	1/1:15,13:28:38.60:429,39,0	1/1:7,18:26:38.29:421,38,0	0/1:5,9:14:12.72:245,0,13
chr10	17136630	.	A	ATGC	11065.10	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=8.706;DP=592;FS=32.316;HRun=0;HaplotypeScore=348.2309;InbreedingCoeff=0.6980;MQ=47.70;MQ0=0;MQRankSum=-8.720;QD=20.76;ReadPosRankSum=5.373;VQSLOD=3.7666;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:12:12.03:160,12,0	1/1:0,0:8:6.02:75,6,0	0/0:29,0:27:81.27:0,81,1409	0/0:30,0:26:34.73:0,35,1011	1/1:1,0:12:9.03:110,9,0	1/1:3,0:25:57.18:736,57,0	1/1:1,0:21:24.08:314,24,0	1/1:0,4:24:69.17:931,69,0	1/1:5,0:42:78.60:945,79,0	1/1:4,0:34:99:1239,102,0	1/1:2,0:9:5.78:74,6,0	1/1:2,0:31:45.10:513,45,0	1/1:4,0:30:40.98:640,41,0	1/1:2,0:34:47.91:594,48,0	1/1:5,0:47:44.35:600,44,0	1/1:3,0:36:57.18:734,57,0	1/1:2,0:6:6.02:75,6,0	1/1:2,0:12:24.08:307,24,0	1/1:0,0:1:3.01:42,3,0	1/1:1,0:16:21.07:258,21,0	1/1:6,0:23:14.95:152,15,0	1/1:0,0:18:23.72:297,24,0	1/1:1,0:9:8.89:123,9,0	1/1:5,0:13:14.96:153,15,0	1/1:0,0:16:21.07:259,21,0	1/1:3,0:30:84.26:1051,84,0	1/1:0,0:16:39.12:494,39,0	1/1:1,0:8:6.59:188,7,0
chr10	17136631	.	C	CGT	10264.48	PASS	AB=0.533;AC=51;AF=0.911;AN=56;BaseQRankSum=9.887;DP=579;FS=38.157;HRun=0;HaplotypeScore=345.4904;InbreedingCoeff=0.5724;MQ=47.35;MQ0=0;MQRankSum=-9.797;QD=19.74;ReadPosRankSum=7.444;VQSLOD=3.9390;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,8:12:4.40:43,4,0	1/1:0,8:8:6.02:75,6,0	0/0:29,0:27:81.06:0,81,1205	0/0:30,0:26:62.95:0,63,939	1/1:1,11:12:9.03:107,9,0	1/1:3,22:25:54.61:658,55,0	1/1:1,20:21:21.07:267,21,0	1/1:1,16:17:48.15:643,48,0	1/1:4,37:41:74.86:905,75,0	1/1:3,29:33:89.05:1195,89,0	1/1:2,7:9:5.92:75,6,0	1/1:3,29:32:43.36:508,43,0	1/1:3,26:30:41.12:592,41,0	1/1:3,32:35:48.11:582,48,0	1/1:4,42:46:44.12:589,44,0	1/1:2,33:35:51.16:645,51,0	1/1:2,4:6:6.02:78,6,0	1/1:2,10:12:24.08:317,24,0	1/1:0,1:1:3.01:41,3,0	1/1:1,15:16:21.07:268,21,0	1/1:6,17:23:11.22:95,11,0	1/1:0,18:18:24.02:305,24,0	1/1:1,8:9:8.97:100,9,0	1/1:2,8:10:9.03:112,9,0	1/1:0,16:16:21.07:270,21,0	1/1:2,27:29:83.76:1101,84,0	1/1:2,14:16:39.11:494,39,0	0/1:1,7:8:5.89:200,0,6
chr10	17136633	.	C	CGTAT	21677.34	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=9.094;DP=581;FS=35.452;HRun=0;HaplotypeScore=312.8181;InbreedingCoeff=0.6828;MQ=47.24;MQ0=0;MQRankSum=-9.684;QD=41.45;ReadPosRankSum=7.946;VQSLOD=3.9214;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,0:10:5.97:99,6,0	1/1:8,0:8:6.02:161,6,0	0/0:26,0:24:59.92:0,60,1251	0/0:32,0:28:68.08:0,68,1181	1/1:12,0:12:9.03:238,9,0	1/1:22,0:22:48.16:1288,48,0	1/1:23,0:23:21.07:566,21,0	1/1:17,0:17:48.16:1281,48,0	1/1:38,1:41:72.25:1926,72,0	1/1:32,0:33:95.53:2425,96,0	1/1:9,0:9:5.92:163,6,0	1/1:32,0:32:48.07:1138,48,0	1/1:30,0:30:54.18:1342,54,0	1/1:35,0:35:54.16:1318,54,0	1/1:42,1:48:51.17:1304,51,0	1/1:33,0:33:51.18:1368,51,0	1/1:5,0:5:6.02:162,6,0	1/1:10,0:10:24.08:650,24,0	1/1:2,0:2:6.01:108,6,0	1/1:16,0:16:21.07:566,21,0	1/1:24,0:24:9.02:196,9,0	1/1:19,0:19:24.04:649,24,0	1/1:9,0:9:5.98:162,6,0	1/1:10,0:10:9.02:243,9,0	1/1:18,0:18:21.07:568,21,0	1/1:32,0:32:84.20:2209,84,0	1/1:17,0:17:42.13:1064,42,0	1/1:8,0:8:15.86:484,16,0
chr10	17136639	.	CTT	C	1900.07	PASS	AB=1.000;AC=42;AF=0.750;AN=56;BaseQRankSum=2.479;DP=605;FS=52.141;HRun=2;HaplotypeScore=382.8480;InbreedingCoeff=0.3179;MQ=49.38;MQ0=0;MQRankSum=-4.341;QD=3.81;ReadPosRankSum=2.006;VQSLOD=-0.7468;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,0:9:2.88:15,3,0	1/1:9,0:9:4.30:22,4,0	0/0:27,0:25:44.36:0,44,1025	0/0:31,0:28:63.04:0,63,1089	0/0:11,0:11:1.25:0,1,3	1/1:24,0:24:9.98:79,10,0	1/1:27,0:27:18.52:210,19,0	1/1:19,0:19:31.63:150,32,0	1/1:43,0:43:16.14:173,16,0	1/1:34,0:34:54.25:291,54,0	1/1:9,0:9:1.65:43,2,0	1/1:31,0:31:8.35:74,8,0	0/1:31,0:31:12.60:38,0,13	1/1:36,0:36:10.72:75,11,0	0/1:50,0:50:5.21:92,0,5	0/1:35,0:35:10.18:67,0,10	1/1:4,0:4:0.89:2,1,0	1/1:10,0:10:7.51:24,8,0	1/1:3,0:3:8.19:53,8,0	1/1:15,0:15:3.24:6,3,0	0/0:25,0:25:1.90:0,2,5	1/1:21,0:21:2.95:62,3,0	1/1:11,0:11:6.43:85,6,0	0/0:10,0:11:0.50:0,1,4	1/1:18,0:18:6.87:44,7,0	1/1:27,8:35:42.21:376,42,0	1/1:17,0:17:12.77:54,13,0	0/1:8,0:8:12.70:13,0,29
chr10	17136641	.	T	TATAC	22783.28	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=7.668;DP=761;FS=35.805;HRun=0;HaplotypeScore=409.7499;InbreedingCoeff=0.8410;MQ=47.46;MQ0=0;MQRankSum=-7.850;QD=32.50;ReadPosRankSum=5.628;VQSLOD=3.4285;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:18:8.87:156,9,0	1/1:11,0:11:9.03:159,9,0	0/0:26,0:24:45.88:0,46,792	0/0:34,0:30:53.85:0,54,837	1/1:15,0:15:15.05:323,15,0	1/1:26,0:26:54.18:1113,54,0	1/1:35,0:35:39.11:790,39,0	1/1:32,0:30:87.06:1598,87,0	1/1:49,0:49:87.27:1762,87,0	1/1:41,0:41:99:2333,117,0	1/1:12,0:12:8.95:204,9,0	1/1:37,0:37:57.18:1104,57,0	1/1:38,0:38:69.21:1330,69,0	1/1:47,0:47:78.24:1543,78,0	1/1:60,0:60:60.19:1263,60,0	1/1:43,0:43:63.21:1297,63,0	1/1:7,0:7:9.03:195,9,0	1/1:12,0:12:27.09:587,27,0	1/1:11,0:11:33:404,33,0	1/1:19,0:19:27.09:590,27,0	1/1:23,12:40:11.76:264,12,0	1/1:23,0:23:29.80:604,30,0	1/1:14,0:14:21:339,21,0	1/1:15,0:15:8.81:198,9,0	1/1:18,0:18:27.07:510,27,0	1/1:44,0:44:99:2553,126,0	1/1:24,0:24:60.18:1145,60,0	1/1:10,0:10:21.02:418,21,0
chr10	17136760	.	G	GCA	1767.18	PASS	AB=0.808;AC=32;AF=0.696;AN=46;BaseQRankSum=0.296;DP=582;FS=14.726;HRun=0;HaplotypeScore=157.6305;InbreedingCoeff=0.2373;MQ=54.17;MQ0=9;MQRankSum=2.061;QD=4.69;ReadPosRankSum=-1.163;VQSLOD=2.2871;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:32,0:30:13.85:124,14,0	1/1:9,0:9:7.55:70,8,0	./.	./.	./.	1/1:11,0:11:2.75:23,3,0	0/1:23,8:32:27:164,0,27	0/0:30,0:27:2.29:0,2,9	0/0:15,0:20:11.36:0,11,56	1/1:24,0:24:31.41:282,31,0	1/1:4,0:4:2.50:9,2,0	0/1:36,0:36:0.63:53,0,1	1/1:25,0:24:11.77:81,12,0	0/1:13,0:19:0:0,0,0	0/1:22,0:22:0:0,0,0	0/1:17,11:28:47.62:161,0,48	1/1:20,0:20:17.43:173,17,0	0/1:7,14:23:32.56:370,0,33	./.	0/0:9,0:11:2.32:0,2,13	0/0:57,0:58:2.09:0,2,6	1/1:5,0:9:3.47:27,3,0	1/1:5,0:12:5.29:24,5,0	1/1:44,0:43:24.41:152,24,0	1/1:4,2:8:3.01:45,3,0	1/1:15,0:14:3.88:78,4,0	./.	1/1:3,0:3:8.85:58,9,0
chr10	17137647	.	AGGGAG	A	8371.22	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=0.413;DP=753;FS=15.858;HRun=0;HaplotypeScore=173.7389;InbreedingCoeff=0.9989;MQ=75.05;MQ0=1;MQRankSum=-4.449;QD=44.29;ReadPosRankSum=4.242;VQSLOD=3.6612;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,35:38:78.22:1597,78,0	0/0:12,0:12:36.12:0,36,1107	0/0:23,0:23:42.83:0,43,1802	0/0:26,0:25:66.22:0,66,1799	0/0:20,0:20:60.19:0,60,1692	0/0:24,0:24:69.24:0,69,2072	0/0:37,0:37:99:0,105,3145	0/0:22,0:22:63.22:0,63,1885	0/0:34,0:34:96.33:0,96,2956	0/0:20,0:20:57.20:0,57,1739	0/0:12,0:12:21.07:0,21,590	1/1:5,26:31:66.23:1396,66,0	1/1:3,22:25:60.21:1268,60,0	1/1:2,29:30:72.25:1498,72,0	0/0:30,0:30:87.30:0,87,2726	0/0:27,0:27:75.24:0,75,2231	0/0:42,0:42:99:0,117,3478	0/0:30,0:30:84.29:0,84,2553	0/0:23,0:23:57.18:0,57,1707	0/0:18,0:18:51.17:0,51,1526	0/0:71,0:71:99:0,202,6183	1/1:2,18:20:45.15:911,45,0	1/1:3,11:14:24.55:489,25,0	1/1:2,28:30:56.30:1212,56,0	0/0:25,0:25:72.20:0,72,2176	0/0:31,0:31:87.26:0,87,2537	0/0:24,0:24:72.25:0,72,2152	0/0:13,0:13:39.13:0,39,1091
chr10	17139609	.	GC	G	11069.95	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-5.541;DP=576;FS=9.945;HRun=10;HaplotypeScore=99.4288;InbreedingCoeff=0.8344;MQ=78.07;MQ0=0;MQRankSum=-4.794;QD=20.77;ReadPosRankSum=4.590;VQSLOD=4.7287;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,42:52:99:1015,117,0	1/1:2,5:7:15:130,15,0	0/0:17,0:18:20.77:0,21,175	0/0:24,0:21:28.18:0,28,268	1/1:2,11:13:29.98:260,30,0	1/1:1,6:7:15:130,15,0	1/1:7,10:17:0.03:227,0,0	1/1:1,14:15:41.93:360,42,0	1/1:1,18:20:56.02:475,56,0	1/1:3,9:12:17.93:151,18,0	1/1:3,12:15:32.99:286,33,0	1/1:3,24:27:74.95:647,75,0	1/1:1,24:25:68.98:599,69,0	1/1:4,29:33:83.91:729,84,0	1/1:4,18:22:50.96:443,51,0	1/1:3,21:24:59.98:521,60,0	1/1:4,22:26:68.98:598,69,0	1/1:4,15:19:11.80:332,12,0	1/1:3,9:12:29.97:257,30,0	1/1:5,16:21:47.97:417,48,0	1/1:4,43:47:99:936,107,0	1/1:0,11:11:29.99:260,30,0	1/1:0,13:13:38.99:338,39,0	1/1:2,31:33:83.96:729,84,0	1/1:4,12:16:29.97:260,30,0	1/1:3,15:18:44.99:390,45,0	1/1:2,19:22:56.02:475,56,0	1/1:2,4:6:11.99:104,12,0
chr10	17140138	.	CATCACAACTCTGAA	C	11158.35	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=14.642;DP=687;FS=11.818;HRun=0;HaplotypeScore=263.0141;InbreedingCoeff=0.9982;MQ=84.15;MQ0=0;MQRankSum=-14.893;QD=85.18;ReadPosRankSum=3.529;VQSLOD=3.4149;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,154,10361	0/0:18,0:18:48.14:0,48,2977	0/0:25,0:25:69.21:0,69,3600	0/0:21,0:21:54.19:0,54,2896	0/0:19,0:19:57.20:0,57,3972	1/1:0,11:10:18.06:747,18,0	1/1:4,21:25:54.19:2267,54,0	0/0:23,0:23:66.23:0,66,3924	1/1:4,24:28:72.25:3042,72,0	0/0:17,0:17:48.16:0,48,3276	0/0:16,0:16:48.16:0,48,3274	0/0:31,0:31:87.28:0,87,5269	0/0:29,0:29:87.30:0,87,5944	0/0:37,0:37:99:0,111,7332	0/0:15,0:15:45.15:0,45,3070	1/1:4,22:26:45.15:1896,45,0	0/0:34,0:34:99:0,102,6673	1/1:2,15:17:30.10:1178,30,0	0/0:27,0:27:78.27:0,78,4576	0/0:25,0:25:72.25:0,72,4970	0/0:52,0:52:99:0,154,9760	0/0:21,0:21:57.20:0,57,3376	0/0:16,0:16:42.14:0,42,2799	0/0:18,0:18:51.18:0,51,3571	1/1:2,22:22:48.16:2028,48,0	0/0:23,0:23:69.24:0,69,4600	0/0:21,0:21:63.22:0,63,3834	0/0:17,0:17:51.18:0,51,3459
chr10	17140602	.	CATGTATGTATGT	C	6950.38	PASS	AB=0.865;AC=25;AF=0.446;AN=56;BaseQRankSum=10.299;DP=714;FS=3.672;HRun=0;HaplotypeScore=289.4134;InbreedingCoeff=0.6913;MQ=61.83;MQ0=2;MQRankSum=-8.058;QD=20.87;ReadPosRankSum=0.162;VQSLOD=3.6506;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:36.11:0,36,1443	1/1:1,8:9:12.04:351,12,0	0/0:26,0:23:8.88:0,9,106	0/0:17,0:12:4.26:0,4,129	1/1:6,15:21:9.03:127,9,0	1/1:18,0:15:5.15:75,5,0	0/0:19,0:17:1.81:0,2,26	0/0:35,0:34:57.17:0,57,1709	0/1:26,0:23:48.18:63,0,48	0/1:11,23:31:21.92:1249,0,22	1/1:7,28:35:51.06:1116,51,0	0/0:36,0:36:66.20:0,66,2748	0/0:41,0:41:96.33:0,96,4346	0/0:39,0:39:87.28:0,87,1802	1/1:13,33:41:45.15:1458,45,0	1/1:22,0:22:22.78:126,23,0	1/1:11,17:26:9.03:262,9,0	0/1:12,0:12:3.36:68,0,3	0/0:16,0:15:22.63:0,23,996	0/0:27,0:27:66.21:0,66,3086	0/0:34,0:34:87.27:0,87,3732	0/0:20,0:20:51.18:0,51,2540	0/0:26,0:26:60.21:0,60,2914	0/0:22,0:22:36.11:0,36,1543	1/1:24,0:24:11.70:124,12,0	1/1:4,20:22:45.09:1212,45,0	1/1:8,18:20:15.05:513,15,0	1/1:5,3:8:6.02:209,6,0
chr10	17140607	.	AT	A	431.24	PASS	AB=0.729;AC=8;AF=0.143;AN=56;BaseQRankSum=7.614;DP=723;FS=3.501;HRun=1;HaplotypeScore=186.0767;InbreedingCoeff=0.1076;MQ=56.92;MQ0=2;MQRankSum=-4.751;QD=2.68;ReadPosRankSum=1.166;VQSLOD=-0.1497;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,1:24:30.96:0,31,288	0/0:9,0:9:5.11:0,5,90	0/0:21,0:18:54.11:0,54,785	0/0:15,0:10:27.09:0,27,398	0/0:21,0:21:1.10:0,1,255	0/1:9,9:15:46.76:47,0,74	0/0:16,5:19:29.36:0,29,165	0/0:39,0:38:82.68:0,83,626	0/1:11,15:23:40.58:41,0,128	0/0:34,0:31:33.98:0,34,478	0/0:35,0:35:24.66:0,25,332	0/0:35,0:35:97.82:0,98,680	0/0:42,1:43:65.88:0,66,758	1/1:15,23:38:14.86:382,15,0	0/0:45,0:40:33.30:0,33,512	0/1:10,13:23:14.48:14,0,128	0/0:27,0:25:18.18:0,18,276	0/1:10,3:13:11.99:12,0,108	0/1:17,1:16:0.30:0,0,172	0/0:29,1:30:63.34:0,63,485	0/0:36,0:36:77.73:0,78,670	0/0:21,0:21:31.42:0,31,330	0/0:28,0:28:46.19:0,46,434	0/0:23,0:23:53.81:0,54,354	0/1:13,12:24:66.86:67,0,83	0/0:23,0:21:17.27:0,17,276	0/0:24,0:18:19.17:0,19,256	0/0:8,0:8:14.45:0,14,228
chr10	17140609	.	GTATGTAT	G	4013.82	PASS	AB=0.888;AC=15;AF=0.268;AN=56;BaseQRankSum=13.563;DP=712;FS=1.229;HRun=0;HaplotypeScore=239.9758;InbreedingCoeff=-0.1746;MQ=55.35;MQ0=3;MQRankSum=-9.787;QD=12.31;ReadPosRankSum=3.444;VQSLOD=2.5435;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:23:50.71:0,51,1246	0/1:9,0:9:42.43:112,0,42	0/0:21,0:16:45.14:0,45,639	0/0:16,0:10:27.08:0,27,392	0/0:21,0:21:25.94:0,26,281	0/1:9,9:15:10.91:300,0,11	0/1:16,5:19:56.27:149,0,56	0/0:37,0:36:99:0,106,1882	0/1:11,15:23:44.08:501,0,44	0/1:30,0:27:99:326,0,316	0/1:35,0:35:99:185,0,373	0/0:37,0:37:98.27:0,98,2525	0/0:41,0:42:99:0,123,4000	0/0:14,0:37:95.66:0,96,936	0/1:45,0:40:99:462,0,365	0/1:10,13:23:36.58:388,0,37	0/1:27,0:25:58.02:58,0,202	0/1:9,3:12:69.17:225,0,69	0/0:15,0:14:37.64:0,38,1020	0/0:28,0:29:83.98:0,84,2746	0/0:36,0:36:99:0,106,3309	0/0:20,0:20:54.19:0,54,2080	0/0:27,0:27:71.87:0,72,2429	0/0:24,0:24:56.64:0,57,1383	1/1:14,12:25:20.31:711,20,0	0/1:23,0:21:99:363,0,181	0/1:23,0:17:99:172,0,165	0/1:8,0:8:63.35:63,0,159
chr10	17140767	.	ATG	A	2829.99	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=7.816;DP=967;FS=0.896;HRun=0;HaplotypeScore=191.5158;InbreedingCoeff=0.9515;MQ=52.83;MQ0=17;MQRankSum=-0.140;QD=18.62;ReadPosRankSum=3.173;VQSLOD=3.7332;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:23:16.89:0,17,310	0/0:14,0:14:27.36:0,27,308	0/0:38,1:13:33.58:0,34,517	0/0:40,0:14:38.05:0,38,587	0/0:26,0:26:36.12:0,36,623	1/1:3,28:31:39.10:519,39,0	1/1:1,23:24:51.17:679,51,0	0/0:59,0:57:99:0,157,2594	0/0:41,0:41:84.22:0,84,1434	0/0:40,0:40:42.55:0,43,1242	0/0:25,0:25:44.34:0,44,630	0/0:51,0:51:82.04:0,82,1190	0/0:44,0:44:18.69:0,19,896	0/0:30,0:30:33.32:0,33,512	0/0:43,0:42:59.39:0,59,870	1/1:3,40:42:48.15:640,48,0	0/0:24,0:24:24.61:0,25,901	1/1:2,14:16:2.93:439,3,0	0/0:31,0:27:75.22:0,75,1235	0/0:36,0:36:96.33:0,96,1648	0/0:59,0:59:99:0,141,2378	0/0:30,0:30:24.89:0,25,339	0/0:30,0:30:38.77:0,39,623	0/0:26,0:25:21.07:0,21,356	1/1:10,28:36:55.05:721,55,0	0/0:31,0:31:65.51:0,66,1027	0/0:41,0:40:74.33:0,74,1176	0/0:30,0:29:34.72:0,35,646
chr10	17140789	.	G	GTGTATGTA	6376.89	PASS	AB=0.664;AC=35;AF=0.673;AN=52;BaseQRankSum=-0.807;DP=982;FS=5.688;HRun=0;HaplotypeScore=266.9808;InbreedingCoeff=0.6355;MQ=51.31;MQ0=19;MQRankSum=-0.970;QD=8.99;ReadPosRankSum=-2.303;VQSLOD=3.0221;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:10,16:27:1.25:3,1,0	0/1:5,12:18:0.01:0,0,0	0/0:22,0:8:2.98:0,3,22	0/0:31,0:13:5.97:0,6,75	./.	1/1:22,0:32:24.03:314,24,0	1/1:20,0:23:20.94:251,21,0	0/1:70,0:65:62.97:69,0,63	0/0:40,0:40:15.79:0,16,983	1/1:14,28:45:72.50:1370,72,0	./.	1/1:17,37:58:6.02:96,6,0	1/1:11,27:39:15.05:533,15,0	1/1:8,26:35:3.01:47,3,0	1/1:9,34:45:3:25,3,0	1/1:35,0:48:29.87:701,30,0	1/1:23,0:23:32.88:418,33,0	1/1:15,0:19:22.86:273,23,0	0/0:39,0:31:44.47:0,44,800	0/0:32,0:32:54.03:0,54,994	0/0:53,0:53:31.21:0,31,1261	0/1:8,23:30:0:0,0,0	0/1:9,14:28:0:0,0,0	0/1:7,18:27:0.06:0,0,0	1/1:23,0:30:44.37:663,44,0	1/1:4,1:32:65.15:1061,65,0	1/1:19,0:42:9.50:243,9,0	1/1:9,0:27:12.04:309,12,0
chr10	17142513	.	T	TAC	6034.39	PASS	AB=0.585;AC=16;AF=0.286;AN=56;BaseQRankSum=-12.964;DP=875;FS=7.035;HRun=0;HaplotypeScore=103.6624;InbreedingCoeff=0.8289;MQ=59.24;MQ0=8;MQRankSum=1.403;QD=30.63;ReadPosRankSum=1.550;VQSLOD=6.8277;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:57:99:0,144,1776	1/1:4,7:11:18.06:297,18,0	0/0:61,0:28:33.53:0,34,535	0/0:56,0:32:51.75:0,52,585	1/1:4,21:26:51.17:841,51,0	0/0:30,0:30:72.23:0,72,900	0/0:43,0:44:99:0,117,1409	0/0:25,0:25:69.20:0,69,841	0/0:42,0:43:99:0,117,1408	1/1:3,21:24:63.18:1011,63,0	1/1:4,7:12:15.05:246,15,0	0/0:24,0:24:60.19:0,60,750	0/0:31,0:31:84.24:0,84,1034	0/0:24,0:24:60.19:0,60,749	1/1:6,31:37:49.80:1349,50,0	0/0:37,0:37:90.26:0,90,1099	1/1:5,20:26:42.14:693,42,0	0/0:28,0:28:75.20:0,75,908	0/0:19,0:19:39.12:0,39,488	0/0:21,0:21:45.09:0,45,520	0/0:67,0:67:99:0,171,2108	0/0:22,0:22:54.16:0,54,662	0/0:14,0:14:27.07:0,27,325	0/0:50,0:49:99:0,117,1445	0/0:25,0:25:57.13:0,57,683	1/1:4,21:26:66.21:1046,66,0	0/1:9,15:24:10.41:367,0,10	0/1:2,8:10:22.47:183,0,22
chr10	17143046	.	G	GA	5230.76	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=-13.047;DP=631;FS=9.008;HRun=7;HaplotypeScore=63.5225;InbreedingCoeff=0.9095;MQ=75.85;MQ0=0;MQRankSum=-1.482;QD=27.39;ReadPosRankSum=1.494;VQSLOD=5.4305;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,126,1207	1/1:1,7:8:18.53:217,19,0	0/0:15,0:17:10.85:0,11,228	0/1:12,0:12:4.69:5,0,120	1/1:3,16:19:22.22:549,22,0	0/0:19,0:19:45.07:0,45,434	0/0:29,0:29:78.10:0,78,747	0/0:18,0:18:33.02:0,33,309	0/0:21,0:21:54.08:0,54,520	1/1:4,17:21:54.16:637,54,0	1/1:2,12:14:4.15:332,4,0	0/0:25,0:25:75.10:0,75,717	0/0:27,0:28:77.16:0,77,730	0/0:20,0:20:57.08:0,57,545	1/1:5,22:27:54.17:649,54,0	0/0:20,0:20:54.03:0,54,500	1/1:2,27:29:75.23:903,75,0	0/0:26,0:26:72.09:0,72,688	0/0:20,0:20:54.06:0,54,514	0/0:24,0:24:69.11:0,69,665	0/0:33,0:33:92.80:0,93,870	0/0:15,0:15:30.05:0,30,289	0/0:24,0:24:66.10:0,66,636	0/0:24,0:24:60.09:0,60,579	0/0:28,0:28:75.10:0,75,717	1/1:1,20:20:60.17:712,60,0	1/1:2,24:26:63.19:758,63,0	1/1:0,14:14:39.12:469,39,0
chr10	17144657	.	T	TCC	8142.93	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=-5.763;DP=714;FS=3.839;HRun=7;HaplotypeScore=147.7815;InbreedingCoeff=0.7656;MQ=76.61;MQ0=11;MQRankSum=-3.912;QD=18.94;ReadPosRankSum=2.243;VQSLOD=2.0856;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:12,38:50:84.24:1324,84,0	0/0:12,0:12:14.25:0,14,42	0/0:35,0:30:62.22:0,62,648	0/0:40,0:37:73.58:0,74,793	0/0:18,0:17:12.80:0,13,53	1/1:5,0:21:25.31:246,25,0	1/1:4,0:21:28.46:243,28,0	0/1:34,0:34:3.96:4,0,252	0/0:25,0:25:52.89:0,53,195	0/0:26,0:25:41.65:0,42,129	0/0:15,0:14:10.50:0,10,39	1/1:1,31:32:81.28:1318,81,0	1/1:3,18:21:45.02:733,45,0	1/1:2,28:30:62.94:1022,63,0	0/0:25,0:24:44.81:0,45,130	1/1:7,0:19:21.62:241,22,0	0/0:41,0:38:62.54:0,63,201	1/1:3,0:18:38.97:260,39,0	0/1:25,0:25:17.99:18,0,161	1/1:22,0:22:18.01:128,18,0	0/1:36,0:36:19.48:140,0,19	1/1:3,21:25:48.16:772,48,0	1/1:2,12:14:15.05:243,15,0	1/1:10,31:41:78.22:1243,78,0	1/1:2,0:16:25.43:208,25,0	0/0:22,0:19:16.98:0,17,67	0/0:15,0:15:22.37:0,22,66	0/0:3,0:2:2.04:0,2,6
chr10	17144661	.	C	CA	1131.13	PASS	AB=1.000;AC=8;AF=0.143;AN=56;BaseQRankSum=-1.255;DP=713;FS=3.678;HRun=0;HaplotypeScore=157.7724;InbreedingCoeff=0.2994;MQ=74.57;MQ0=11;MQRankSum=-6.244;QD=9.05;ReadPosRankSum=1.621;VQSLOD=3.7621;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:70.64:0,71,484	0/0:12,0:12:23.83:0,24,170	0/0:35,0:30:81.15:0,81,1018	0/0:38,0:35:93.49:0,93,1145	0/0:21,0:19:21.09:0,21,208	0/1:21,0:20:58.67:97,0,59	0/1:24,0:23:57.67:58,0,99	0/0:36,0:36:99:0,101,1313	1/1:1,27:27:66.20:894,66,0	0/0:28,0:26:64.61:0,65,560	0/0:13,0:11:17.35:0,17,149	0/0:33,0:33:79.61:0,80,444	0/0:18,0:18:43.50:0,43,241	0/0:33,0:33:56.23:0,56,367	0/0:26,0:24:68.57:0,69,496	0/1:16,0:16:57.06:57,0,88	0/0:44,0:40:99:0,100,722	1/1:19,0:17:1.61:86,2,0	0/0:24,0:24:71.33:0,71,872	0/0:23,0:23:62.98:0,63,711	0/0:40,0:40:96.29:0,96,1218	0/0:25,0:25:26.46:0,26,224	0/0:12,0:12:13.91:0,14,70	0/0:37,0:37:84.11:0,84,495	0/1:17,0:16:24.57:77,0,25	0/0:25,0:21:40.67:0,41,368	0/0:13,0:13:35.63:0,36,244	0/0:3,0:2:2.98:0,3,21
chr10	17144664	.	CA	C	6557.61	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-13.315;DP=698;FS=0.314;HRun=1;HaplotypeScore=138.5409;InbreedingCoeff=0.9720;MQ=73.21;MQ0=11;MQRankSum=-2.986;QD=23.67;ReadPosRankSum=1.575;VQSLOD=4.8401;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:89.94:0,90,522	1/1:0,11:12:21.01:270,21,0	0/0:34,0:30:31.92:0,32,841	0/0:36,0:34:64.18:0,64,971	1/1:2,19:19:48.07:612,48,0	1/1:19,1:19:25.77:180,26,0	1/1:23,0:22:38.49:255,38,0	0/0:35,0:35:99:0,100,1110	0/0:27,0:26:64.98:0,65,580	1/1:1,27:26:78.24:1049,78,0	1/1:1,13:12:27.09:370,27,0	0/0:32,0:32:83.53:0,84,480	0/0:20,0:20:49.28:0,49,280	0/0:33,0:33:78.06:0,78,467	1/1:1,25:24:66.22:921,66,0	1/1:15,0:15:20.55:146,21,0	1/1:3,39:38:44.57:1128,45,0	1/1:19,1:18:40.01:206,40,0	0/0:25,0:25:75.13:0,75,848	0/0:23,0:23:57.04:0,57,633	0/0:41,0:41:90.21:0,90,1035	0/0:23,0:23:44.74:0,45,234	0/0:12,0:12:14.43:0,14,78	0/0:33,0:33:81.46:0,81,461	1/1:16,0:15:28.30:169,28,0	1/1:1,23:20:57.14:729,57,0	1/1:0,13:13:36.09:481,36,0	1/1:0,3:2:3.01:42,3,0
chr10	17144670	.	C	CAT	11762.23	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-15.844;DP=703;FS=1.709;HRun=0;HaplotypeScore=137.4266;InbreedingCoeff=0.9743;MQ=70.91;MQ0=11;MQRankSum=-4.973;QD=36.53;ReadPosRankSum=3.187;VQSLOD=6.8251;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:48,0:48:86.76:1297,87,0	0/0:15,0:15:29.99:0,30,318	0/0:35,0:30:51.53:0,52,858	0/0:38,0:35:80.42:0,80,1102	0/0:21,0:19:51.09:0,51,567	0/0:19,0:18:50.75:0,51,474	0/0:20,0:19:50.89:0,51,501	1/1:2,35:38:99:1521,105,0	0/0:27,0:26:56.04:0,56,247	0/0:30,0:28:84.23:0,84,1038	0/0:14,0:12:27.06:0,27,316	1/1:32,0:32:85.11:1261,85,0	1/1:18,0:18:48.62:730,49,0	1/1:32,0:32:72.50:1043,72,0	0/0:28,0:26:69.20:0,69,849	0/0:19,0:19:56.98:0,57,529	0/0:39,0:35:90.15:0,90,1104	0/0:18,0:16:44.99:0,45,396	1/1:0,25:26:78.08:1150,78,0	1/1:0,22:22:54.18:999,54,0	1/1:0,37:37:78.27:1502,78,0	1/1:24,0:24:50.08:753,50,0	1/1:13,0:13:21.04:289,21,0	1/1:32,0:32:83.38:1217,83,0	0/0:16,0:16:44.57:0,45,394	0/0:26,0:22:66.17:0,66,789	0/0:13,0:13:36.11:0,36,433	0/0:3,0:2:3.01:0,3,36
chr10	17145859	.	T	TTTTG	8522.22	PASS	AB=0.600;AC=49;AF=0.875;AN=56;BaseQRankSum=3.599;DP=562;FS=5.435;HRun=0;HaplotypeScore=249.2843;InbreedingCoeff=0.8681;MQ=64.81;MQ0=6;MQRankSum=-6.381;QD=17.75;ReadPosRankSum=-1.074;VQSLOD=3.9204;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:25:50.76:418,51,0	1/1:6,0:6:9:78,9,0	0/0:28,0:22:62.95:0,63,603	0/0:25,0:19:37.24:0,37,429	1/1:25,0:25:47.35:380,47,0	1/1:13,0:13:14.93:172,15,0	1/1:24,0:23:47.78:403,48,0	1/1:20,0:20:44.38:391,44,0	0/0:29,0:27:25.76:0,26,262	1/1:23,0:22:31.40:357,31,0	1/1:3,0:3:3.44:20,3,0	1/1:25,0:25:35.93:258,36,0	1/1:14,0:14:34.91:316,35,0	1/1:22,0:21:51.23:452,51,0	1/1:37,0:36:73.96:595,74,0	1/1:27,0:27:69.62:665,70,0	1/1:19,0:19:41.78:323,42,0	1/1:17,0:16:35.91:321,36,0	1/1:21,0:20:50.48:467,50,0	1/1:17,0:17:44.11:347,44,0	1/1:33,0:30:72.65:627,73,0	1/1:14,0:13:35.93:330,36,0	0/1:4,8:12:0:1,0,0	1/1:14,0:14:20.92:198,21,0	1/1:19,0:19:31.49:315,31,0	1/1:33,0:33:76.67:640,77,0	1/1:10,0:10:24:317,24,0	1/1:6,0:6:14.98:131,15,0
chr10	17146227	.	ACACACACACACACG	A	4401.39	PASS	AB=0.936;AC=16;AF=0.286;AN=56;BaseQRankSum=11.286;DP=603;FS=18.880;HRun=0;HaplotypeScore=235.4699;InbreedingCoeff=0.5780;MQ=51.62;MQ0=9;MQRankSum=-8.298;QD=22.81;ReadPosRankSum=3.914;VQSLOD=2.3887;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:51.58:0,52,1743	0/1:5,1:6:7.43:186,0,7	0/0:32,0:9:17.95:0,18,399	0/0:18,0:8:15.01:0,15,244	1/1:22,0:22:14.78:257,15,0	0/0:26,0:26:36.10:0,36,1182	0/0:22,0:22:42.14:0,42,1672	0/0:22,0:21:52.64:0,53,1885	1/1:22,1:23:36.12:730,36,0	0/1:24,2:26:77.81:797,0,78	1/1:15,1:15:4.06:478,4,0	0/0:26,0:26:56.94:0,57,2308	0/0:20,0:20:45.14:0,45,2111	0/0:19,0:19:33.10:0,33,1204	1/1:20,0:20:21.96:329,22,0	0/0:22,0:22:29.63:0,30,1174	1/1:26,0:26:3.09:341,3,0	0/0:25,0:25:54.19:0,54,2122	0/0:18,0:16:25.11:0,25,1024	0/0:15,0:15:15.05:0,15,519	0/0:27,0:26:27.05:0,27,746	0/0:15,0:15:39.12:0,39,1803	0/0:13,0:13:36.09:0,36,1086	0/0:36,0:36:78.25:0,78,3349	0/0:21,0:21:30.10:0,30,1285	1/1:23,0:23:6.91:863,7,0	0/1:23,1:24:22.91:306,0,23	0/1:7,0:7:15.95:114,0,16
chr10	17146229	.	ACACACACACACG	A	8182.19	PASS	AB=1.000;AC=24;AF=0.429;AN=56;BaseQRankSum=-4.261;DP=604;FS=18.666;HRun=0;HaplotypeScore=204.2465;InbreedingCoeff=0.7334;MQ=51.54;MQ0=9;MQRankSum=-6.856;QD=27.74;ReadPosRankSum=-0.564;VQSLOD=2.4633;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:24.09:0,24,1385	1/1:1,5:6:12.04:306,12,0	0/1:34,0:11:54.87:55,0,224	0/0:16,0:6:10.32:0,10,197	1/1:4,18:22:15.05:473,15,0	0/0:27,0:27:33.09:0,33,939	0/0:22,0:22:42.14:0,42,1330	0/1:24,0:23:1.05:1,0,1385	1/1:2,20:22:36.10:1222,36,0	1/1:7,19:26:56.94:1474,57,0	1/1:5,11:15:27.09:831,27,0	0/0:26,0:26:53.98:0,54,1855	0/0:19,0:19:41.17:0,41,1712	0/0:20,0:20:14.10:0,14,952	1/1:3,17:20:24.08:709,24,0	0/0:22,0:22:29.73:0,30,952	1/1:9,16:25:18.53:647,19,0	0/0:25,0:25:54.12:0,54,1716	0/1:19,0:17:5.80:6,0,761	0/0:13,0:13:15.01:0,15,403	0/1:26,0:25:3.89:4,0,549	0/0:15,0:15:14.17:0,14,1445	0/0:14,0:14:9.12:0,9,824	0/0:36,0:36:53.29:0,53,2691	0/0:20,0:20:30.10:0,30,1021	1/1:3,21:24:60.13:1730,60,0	1/1:5,18:23:15.05:483,15,0	1/1:6,2:8:9.01:242,9,0
chr10	17146562	.	GATTT	G	19439.55	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=14.865;DP=644;FS=4.714;HRun=0;HaplotypeScore=112.6548;InbreedingCoeff=0.9894;MQ=62.80;MQ0=0;MQRankSum=-5.036;QD=41.01;ReadPosRankSum=2.688;VQSLOD=5.3327;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,52:53:99:2214,123,0	1/1:0,4:4:9.03:165,9,0	0/0:18,0:17:38.41:0,38,846	0/0:12,0:12:27.09:0,27,584	1/1:3,28:31:75.12:1300,75,0	0/0:24,0:24:66.23:0,66,1702	0/0:27,0:27:78.27:0,78,1958	1/1:5,30:35:90.27:1483,90,0	0/0:23,0:23:63.20:0,63,1608	1/1:3,18:21:51.09:812,51,0	1/1:0,17:17:42.14:751,42,0	1/1:0,22:22:39.13:717,39,0	1/1:2,19:21:48.16:882,48,0	1/1:1,16:17:45.15:828,45,0	1/1:4,29:33:75.26:1379,75,0	0/0:26,0:26:75.26:0,75,1946	1/1:3,21:24:45.15:827,45,0	0/0:20,0:20:57.18:0,57,1435	1/1:4,26:30:78.23:1308,78,0	1/1:2,16:18:42.08:706,42,0	1/1:1,18:19:36.04:607,36,0	1/1:0,16:16:42.14:772,42,0	1/1:2,20:22:54.09:956,54,0	1/1:1,24:25:51.17:938,51,0	0/0:20,0:20:60.21:0,60,1585	1/1:0,25:25:75.24:1307,75,0	1/1:4,28:32:59.94:1101,60,0	1/1:0,9:9:21.07:386,21,0
chr10	17151795	.	GCC	G	2523.16	PASS	AB=0.667;AC=15;AF=0.268;AN=56;BaseQRankSum=-7.987;DP=422;FS=2.751;HRun=11;HaplotypeScore=74.4443;InbreedingCoeff=0.8518;MQ=76.54;MQ0=0;MQRankSum=-0.689;QD=18.55;ReadPosRankSum=2.385;VQSLOD=2.9154;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,19:25:54.11:574,54,0	0/0:5,0:5:12.02:0,12,117	0/0:13,0:11:10.79:0,11,100	0/0:12,0:13:13.86:0,14,109	0/0:14,0:14:36.06:0,36,386	0/1:10,2:20:33.90:34,0,94	0/0:10,0:18:35.39:0,35,191	0/0:13,0:13:12.89:0,13,270	0/0:5,1:17:11.26:0,11,194	0/0:12,0:12:29.95:0,30,258	0/0:9,0:9:24.05:0,24,265	1/1:3,19:22:51.10:543,51,0	1/1:5,9:14:27.03:281,27,0	1/1:2,15:17:42.07:447,42,0	0/0:25,0:25:69.10:0,69,660	0/0:2,0:14:35.31:0,35,138	0/0:33,0:32:86.79:0,87,876	0/0:5,0:13:28.84:0,29,164	0/0:7,0:7:18.02:0,18,240	0/0:6,0:7:8.52:0,9,100	0/0:23,0:23:35.51:0,36,426	1/1:1,8:9:21.05:224,21,0	1/1:3,5:9:14.46:139,14,0	1/1:2,18:20:45.03:479,45,0	0/0:1,0:5:7.49:0,7,26	0/0:18,0:18:50.82:0,51,426	0/0:20,0:20:48.09:0,48,485	0/0:5,0:5:15:0,15,138
chr10	17153593	.	GA	G	1679.59	PASS	AB=0.758;AC=34;AF=0.607;AN=56;BaseQRankSum=6.836;DP=583;FS=0.000;HRun=16;HaplotypeScore=72.6537;InbreedingCoeff=0.3971;MQ=61.56;MQ0=4;MQRankSum=0.594;QD=4.08;ReadPosRankSum=5.405;VQSLOD=0.5787;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,22:35:26.20:237,26,0	0/1:9,1:10:15.27:26,0,15	0/0:16,1:12:23.14:0,23,154	0/0:13,1:7:11.78:0,12,80	0/0:34,1:36:24.65:0,25,319	1/1:11,6:20:13.76:101,14,0	1/1:9,15:26:7.86:132,8,0	1/1:12,0:26:4.33:52,4,0	0/1:15,3:18:12.19:12,0,217	0/0:23,0:24:20.13:0,20,248	0/0:14,1:16:4.21:0,4,122	1/1:11,2:15:12.61:65,13,0	1/1:6,9:16:19.42:113,19,0	1/1:7,10:19:22.60:174,23,0	0/0:22,0:24:54.86:0,55,430	1/1:7,7:14:17.62:108,18,0	0/0:34,3:38:47.36:0,47,585	1/1:7,16:28:26.20:238,26,0	1/1:10,0:22:20.16:58,20,0	1/1:7,0:18:12.04:35,12,0	0/1:5,0:21:11.48:47,0,11	1/1:5,8:17:5.52:112,6,0	0/1:7,6:14:8.49:71,0,8	0/1:10,10:22:0.53:94,0,1	1/1:5,9:14:22.98:143,23,0	0/1:12,2:16:33.60:34,0,84	0/1:17,5:23:14.69:15,0,198	0/1:13,3:15:3.12:3,0,182
chr10	17154177	.	T	TG	11713.07	PASS	AB=0.955;AC=53;AF=0.946;AN=56;BaseQRankSum=-2.692;DP=417;FS=42.844;HRun=1;HaplotypeScore=52.7684;InbreedingCoeff=0.3141;MQ=47.88;MQ0=32;MQRankSum=-3.479;QD=30.82;ReadPosRankSum=3.562;VQSLOD=2.2528;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,18:16:42.14:628,42,0	1/1:0,4:4:9.03:135,9,0	0/0:36,1:16:0.32:0,0,427	0/1:38,2:16:12.44:12,0,309	1/1:1,16:16:18.06:269,18,0	1/1:2,10:11:27.09:404,27,0	1/1:2,13:14:36.12:538,36,0	1/1:3,24:27:75.18:1073,75,0	1/1:1,21:20:54.18:808,54,0	1/1:3,19:22:63.21:906,63,0	1/1:2,5:6:12.04:180,12,0	1/1:0,12:12:33.11:493,33,0	1/1:2,9:11:30.01:386,30,0	1/1:1,8:9:27.09:397,27,0	1/1:1,14:15:36.08:514,36,0	1/1:0,10:10:27.09:404,27,0	1/1:1,5:6:15.05:223,15,0	1/1:1,9:10:24.08:359,24,0	1/1:3,6:7:21.03:289,21,0	1/1:1,15:16:45.15:673,45,0	1/1:3,8:8:12.04:162,12,0	1/1:1,18:19:39.09:559,39,0	1/1:0,11:11:24.04:334,24,0	1/1:0,9:9:15.05:224,15,0	1/1:1,11:12:30.06:415,30,0	1/1:1,15:16:48.16:701,48,0	1/1:0,14:14:39.13:583,39,0	1/1:0,2:1:3.01:45,3,0
chr10	17156599	.	TACACACATATATACACACACATACAGATATATATATACCC	T	2831.84	PASS	AC=14;AF=0.269;AN=52;BaseQRankSum=7.361;DP=576;FS=0.000;HRun=0;HaplotypeScore=467.1574;InbreedingCoeff=0.9116;MQ=54.10;MQ0=25;MQRankSum=-1.556;QD=23.60;ReadPosRankSum=2.343;VQSLOD=0.0438;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:36.06:0,36,2180	1/1:5,0:5:2.99:23,3,0	0/0:17,0:7:18.06:0,18,582	0/0:17,0:8:9.38:0,9,259	./.	0/0:36,0:36:81.28:0,81,5379	0/0:10,0:10:15.05:0,15,842	0/0:51,0:36:53.87:0,54,1920	0/0:16,0:16:20.19:0,20,1106	1/1:15,15:26:18.06:356,18,0	./.	0/0:17,0:17:28.61:0,29,1661	0/0:13,0:13:27.09:0,27,1652	0/0:15,0:15:25.20:0,25,1568	1/1:9,0:9:10.70:259,11,0	0/0:22,0:22:42.12:0,42,3094	1/1:13,0:12:5.57:175,6,0	0/0:16,0:14:32.81:0,33,2248	0/0:19,0:18:30.10:0,30,2308	0/0:28,0:28:45.15:0,45,2653	0/0:37,0:37:82.82:0,83,4649	0/0:17,0:17:36.12:0,36,2081	0/0:16,0:16:24.08:0,24,1223	0/0:29,0:29:47.67:0,48,3348	0/0:17,0:17:24.07:0,24,1427	1/1:19,18:34:28.61:910,29,0	1/1:18,0:18:25.23:903,25,0	1/1:8,0:8:12.04:384,12,0
chr10	17156633	.	TATACCC	T	381.12	PASS	AB=0.729;AC=3;AF=0.063;AN=48;BaseQRankSum=6.623;DP=445;FS=0.000;HRun=0;HaplotypeScore=137.3017;InbreedingCoeff=0.0134;MQ=56.25;MQ0=3;MQRankSum=-4.751;QD=12.70;ReadPosRankSum=-0.590;VQSLOD=2.8853;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:38.12:0,38,1174	./.	0/0:19,0:13:29.28:0,29,772	0/0:16,0:11:26.92:0,27,852	./.	0/0:26,0:26:75.26:0,75,2616	0/0:13,0:13:35.80:0,36,1254	0/0:43,0:43:99:0,123,3925	0/0:11,0:11:26.52:0,27,674	./.	./.	0/0:16,0:16:46.97:0,47,1450	0/0:13,0:13:30:0,30,873	0/0:14,0:14:28.57:0,29,991	0/0:3,1:4:2.17:0,2,15	0/0:15,0:15:45.15:0,45,1496	0/1:6,5:11:22.43:81,0,22	0/0:16,0:16:23.65:0,24,1407	0/0:17,0:17:48.16:0,48,1677	0/0:18,0:18:54.17:0,54,1789	0/0:39,0:39:86.26:0,86,2888	0/0:14,0:14:42.14:0,42,1420	0/0:7,0:7:21.05:0,21,681	0/0:29,0:29:71.19:0,71,2252	0/0:13,0:13:39.12:0,39,1232	0/0:18,0:18:13.61:0,14,94	0/1:7,7:14:13.50:367,0,13	0/1:4,1:5:10.05:31,0,10
chr10	17156695	.	T	TACAC	620.78	PASS	AB=0.955;AC=16;AF=0.286;AN=56;BaseQRankSum=6.577;DP=524;FS=21.056;HRun=0;HaplotypeScore=126.4350;InbreedingCoeff=-0.1984;MQ=50.86;MQ0=17;MQRankSum=0.795;QD=2.48;ReadPosRankSum=-1.647;VQSLOD=0.7600;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:22:44.95:45,0,360	1/1:2,0:2:2.98:22,3,0	0/0:18,0:11:17.51:0,18,225	0/0:12,0:8:6.89:0,7,61	0/1:10,0:10:0.01:0,0,0	0/0:15,0:15:36.04:0,36,510	0/0:21,0:21:38.89:0,39,620	0/0:46,0:35:68.55:0,69,907	0/0:19,0:18:33.20:0,33,429	0/1:18,0:15:5.18:5,0,248	0/1:11,0:12:6.60:7,0,61	0/1:16,0:24:89.18:89,0,298	0/1:15,0:15:89.14:89,0,121	0/1:12,0:12:7.95:8,0,85	0/1:10,0:10:9.45:9,0,110	0/0:20,0:19:42.12:0,42,641	0/1:24,0:25:99:102,0,278	0/0:22,0:22:57.10:0,57,886	0/0:13,0:10:21.03:0,21,249	0/0:18,0:18:32.86:0,33,436	0/0:41,0:40:60.14:0,60,858	0/1:16,0:16:36.59:37,0,202	0/0:9,0:8:9.03:0,9,135	0/1:20,9:30:19.44:19,0,407	0/0:19,0:19:54.18:0,54,864	0/1:23,0:22:99:185,0,205	0/1:16,0:15:19.39:19,0,172	0/1:14,0:12:24.44:135,0,24
chr10	17156705	.	TACAC	T	624.56	PASS	AB=0.866;AC=11;AF=0.212;AN=52;BaseQRankSum=1.458;DP=550;FS=7.318;HRun=0;HaplotypeScore=123.3579;InbreedingCoeff=0.3956;MQ=48.81;MQ0=18;MQRankSum=-2.704;QD=3.70;ReadPosRankSum=-0.637;VQSLOD=1.3378;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:8.72:0,9,94	0/0:2,0:5:3.01:0,3,52	./.	0/0:10,0:5:2.94:0,3,18	1/1:10,0:11:1.24:4,1,0	0/0:15,0:15:31.69:0,32,610	0/1:16,1:18:17.77:18,0,446	0/1:45,0:31:58:58,0,82	1/1:11,0:18:23.93:212,24,0	0/0:15,0:14:24.08:0,24,494	0/0:13,0:14:10.90:0,11,166	0/0:27,0:27:10.42:0,10,94	0/0:15,0:15:14.42:0,14,166	0/0:14,0:19:5.68:0,6,47	0/0:6,0:17:8.50:0,8,128	0/0:19,0:18:29.91:0,30,571	0/0:19,0:25:38.87:0,39,702	0/0:25,2:27:2.92:0,3,833	1/1:10,0:8:2.51:42,3,0	1/1:11,8:19:12.98:189,13,0	0/1:28,17:45:12.50:245,0,12	0/0:16,0:16:12.26:0,12,206	./.	0/0:32,0:31:11.50:0,11,212	0/0:20,0:21:38.87:0,39,751	0/0:22,0:23:50.64:0,51,790	0/0:16,0:16:21.02:0,21,280	0/0:7,0:14:22.32:0,22,388
chr10	17158444	.	T	TTGTG	608.16	PASS	AB=1.000;AC=15;AF=0.288;AN=52;BaseQRankSum=0.455;DP=596;FS=11.871;HRun=0;HaplotypeScore=131.0957;InbreedingCoeff=0.4428;MQ=65.55;MQ0=17;MQRankSum=-0.171;QD=2.90;ReadPosRankSum=1.082;VQSLOD=1.8014;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:12.07:0,12,167	0/0:7,0:7:3.01:0,3,46	./.	./.	0/0:17,0:19:3:0,3,28	1/1:23,0:22:6:93,6,0	1/1:19,0:22:4.36:25,4,0	0/0:21,0:20:2.86:0,3,17	0/0:18,0:18:8.80:0,9,115	0/0:12,0:12:12.03:0,12,165	0/0:8,0:8:6.01:0,6,70	0/0:15,0:15:3.01:0,3,46	0/0:18,0:17:7.89:0,8,57	0/0:17,0:17:5.97:0,6,92	1/1:26,1:31:23.51:327,24,0	1/1:14,0:16:3.31:50,3,0	0/0:43,0:43:19.87:0,20,257	1/1:15,12:26:6.91:142,7,0	0/0:22,0:21:8.60:0,9,65	0/0:17,0:18:8.66:0,9,92	0/0:41,0:40:14.97:0,15,149	0/0:13,0:13:2.79:0,3,46	0/0:10,0:12:5.87:0,6,74	0/1:39,0:39:7.75:8,0,123	1/1:16,0:16:6.02:108,6,0	0/1:15,0:14:0.04:0,0,0	0/1:16,0:17:3.29:3,0,100	0/0:7,0:5:3.01:0,3,46
chr10	17163377	.	C	CT	568.25	PASS	AB=0.715;AC=16;AF=0.308;AN=52;BaseQRankSum=9.652;DP=234;FS=34.193;HRun=0;HaplotypeScore=75.5091;InbreedingCoeff=-0.2168;MQ=34.97;MQ0=3;MQRankSum=-4.902;QD=4.47;ReadPosRankSum=2.314;VQSLOD=1.5502;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:14,2:16:5.85:0,6,312	0/0:2,0:2:5.99:0,6,58	./.	./.	0/1:4,7:11:34.52:76,0,35	1/1:0,2:2:5.98:48,6,0	0/1:10,7:17:78.24:78,0,267	0/1:3,1:4:22.24:22,0,68	0/0:1,0:1:2.88:0,3,15	0/1:10,4:14:66.72:67,0,185	0/1:5,3:8:24.48:24,0,93	0/0:7,3:9:3.20:0,3,138	0/1:6,4:10:38.05:38,0,148	0/0:9,3:12:16.27:0,16,268	0/1:4,5:9:49.31:49,0,102	0/0:16,2:18:17.27:0,17,352	0/0:3,0:3:6.02:0,6,76	0/0:4,0:4:12:0,12,137	1/1:1,2:2:6.02:66,6,0	0/1:5,3:8:40.91:41,0,47	0/0:5,0:5:9.01:0,9,99	0/1:6,7:13:22.12:22,0,62	0/0:10,6:16:6.98:0,7,162	0/1:8,2:10:9.42:9,0,92	0/1:4,3:7:53.08:53,0,98	0/1:6,5:11:99:124,0,117	0/0:8,0:8:24.06:0,24,284	0/0:3,0:3:9.03:0,9,119
chr10	17163514	.	CTCTG	C	4185.63	PASS	AB=1.000;AC=36;AF=0.818;AN=44;BaseQRankSum=-3.068;DP=586;FS=0.000;HRun=0;HaplotypeScore=165.0074;InbreedingCoeff=0.0353;MQ=50.03;MQ0=26;MQRankSum=2.706;QD=9.16;ReadPosRankSum=3.891;VQSLOD=2.5102;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:41,18:56:78.60:1079,79,0	./.	./.	./.	1/1:15,0:15:1.56:5,2,0	1/1:9,0:9:6.01:56,6,0	1/1:23,0:23:2.36:17,2,0	./.	1/1:12,0:12:6.01:56,6,0	0/1:19,0:19:4.10:66,0,4	1/1:13,0:13:4.58:33,5,0	1/1:15,0:21:12.01:112,12,0	1/1:9,13:22:33.11:521,33,0	1/1:9,10:19:23.90:319,24,0	./.	1/1:19,0:19:5.99:50,6,0	0/1:30,0:30:11.89:16,0,12	0/1:21,0:21:14.74:22,0,15	0/1:18,0:11:21.90:22,0,31	1/1:8,0:8:2.99:23,3,0	0/1:22,0:20:0:0,0,0	1/1:10,6:16:24.03:331,24,0	1/1:9,6:14:21.49:256,21,0	1/1:21,35:56:42.23:970,42,0	./.	0/1:22,0:21:62.92:66,0,63	1/1:18,0:18:18.06:168,18,0	0/0:3,0:3:2.73:0,3,13
chr10	17163518	.	GTC	G	460.17	PASS	AB=0.916;AC=15;AF=0.268;AN=56;BaseQRankSum=12.295;DP=581;FS=18.811;HRun=0;HaplotypeScore=163.0594;InbreedingCoeff=-0.3979;MQ=48.59;MQ0=25;MQRankSum=-1.835;QD=1.52;ReadPosRankSum=5.313;VQSLOD=1.0688;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:60,0:57:0.82:0,1,626	0/0:5,1:6:12.04:0,12,170	0/0:29,0:11:4.33:0,4,278	0/0:49,0:18:23.85:0,24,294	0/1:15,0:15:1.06:1,0,246	0/1:9,1:10:23.98:24,0,53	0/1:21,1:22:8.32:8,0,315	0/0:16,0:14:36.11:0,36,497	0/0:10,0:10:5.97:0,6,163	0/1:18,1:19:99:117,0,502	0/0:12,1:13:4.13:0,4,97	0/1:21,0:21:3.46:3,0,170	0/1:21,0:21:15.75:16,0,236	0/0:20,0:20:4.88:0,5,217	0/1:17,1:18:4.91:5,0,195	0/1:17,2:19:24.09:24,0,272	0/1:18,8:28:43.33:43,0,209	0/1:20,0:20:9.58:10,0,405	0/0:17,0:11:15.40:0,15,269	0/0:9,0:9:12.92:0,13,209	0/0:20,0:18:17.63:0,18,255	0/0:15,0:15:1.74:0,2,255	0/0:15,0:14:4.82:0,5,113	0/1:55,0:55:12.05:12,0,556	0/1:10,2:11:37.88:38,0,73	0/1:18,3:20:99:187,0,404	0/1:14,4:18:84.02:84,0,232	0/1:2,1:3:28.16:28,0,76
chr10	17163536	.	CTG	C	214.33	PASS	AB=0.933;AC=14;AF=0.250;AN=56;BaseQRankSum=8.452;DP=573;FS=6.533;HRun=0;HaplotypeScore=177.0696;InbreedingCoeff=-0.3403;MQ=58.11;MQ0=21;MQRankSum=-0.339;QD=0.74;ReadPosRankSum=10.153;VQSLOD=0.3603;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:57,0:54:9.36:9,0,548	0/0:5,0:5:12.04:0,12,156	0/0:28,0:15:32.25:0,32,453	0/0:45,0:23:6.63:0,7,367	0/0:15,0:15:23.54:0,24,278	0/1:6,3:9:50:50,0,131	0/1:20,0:20:53.94:54,0,94	0/1:11,0:9:1.99:2,0,195	0/1:9,2:11:28.29:28,0,152	0/0:19,0:19:25.76:0,26,443	0/0:13,0:13:4.82:0,5,116	0/0:25,0:25:7.31:0,7,373	0/1:23,0:23:9.95:10,0,260	0/0:21,0:22:16.13:0,16,373	0/0:18,1:19:18.03:0,18,221	0/1:16,3:19:16.75:17,0,194	0/0:30,0:30:34.26:0,34,464	0/1:15,1:16:36.35:36,0,196	0/1:13,0:11:34.37:34,0,196	0/1:8,0:9:45.07:62,0,45	0/0:18,0:17:3.84:0,4,45	0/1:19,0:19:3.94:4,0,182	0/0:14,0:14:7.93:0,8,113	0/1:50,0:50:26.28:26,0,417	0/1:11,2:12:9.91:10,0,157	0/0:24,0:23:39.39:0,39,750	0/1:18,0:18:15.86:16,0,295	0/0:3,0:3:8.96:0,9,92
chr10	17163540	.	CTG	C	487.34	PASS	AB=0.907;AC=19;AF=0.339;AN=56;BaseQRankSum=8.803;DP=581;FS=33.883;HRun=0;HaplotypeScore=183.0782;InbreedingCoeff=-0.5249;MQ=61.80;MQ0=19;MQRankSum=0.204;QD=1.18;ReadPosRankSum=9.277;VQSLOD=0.8004;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:53,1:51:18.30:18,0,494	0/0:6,0:6:5.39:0,5,84	0/0:32,3:21:4.43:0,4,547	0/1:44,3:27:40.79:41,0,519	0/1:11,4:15:28.48:28,0,152	0/1:7,0:10:41.18:41,0,190	0/1:21,0:21:50.93:51,0,131	0/0:9,0:8:14.99:0,15,214	0/1:10,0:12:19.50:19,0,172	0/1:18,2:21:57.20:57,0,380	0/1:9,3:13:56.57:57,0,71	0/0:23,0:23:4.14:0,4,337	0/1:25,0:25:1.07:1,0,323	0/0:21,0:21:13.10:0,13,296	0/1:17,3:21:28.96:29,0,168	0/1:19,0:22:10.42:10,0,228	0/0:27,2:29:11.72:0,12,348	0/1:15,0:16:7.21:7,0,292	0/1:14,0:11:14.68:15,0,253	0/1:8,0:8:39.39:39,0,73	0/0:18,0:16:2.29:0,2,41	0/1:21,0:21:0.94:1,0,204	0/0:14,0:14:7.93:0,8,113	0/1:49,0:49:26.30:26,0,381	0/0:11,0:11:12.04:0,12,171	0/1:19,3:22:46.69:47,0,581	0/1:11,7:18:99:112,0,182	0/1:3,0:3:25.48:35,0,25
chr10	17164130	.	CG	C	6605.89	PASS	AB=0.941;AC=40;AF=0.714;AN=56;BaseQRankSum=4.399;DP=506;FS=1.255;HRun=3;HaplotypeScore=58.2915;InbreedingCoeff=0.8115;MQ=59.71;MQ0=5;MQRankSum=-0.323;QD=18.87;ReadPosRankSum=1.197;VQSLOD=4.5306;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,112,1238	1/1:3,3:6:14.94:143,15,0	0/1:13,0:6:6.61:7,0,46	0/1:13,2:8:17.01:17,0,28	1/1:5,14:19:42.35:411,42,0	1/1:5,3:7:7.59:111,8,0	1/1:1,17:18:30.09:357,30,0	1/1:30,1:30:71.72:578,72,0	1/1:9,0:9:11.04:98,11,0	1/1:3,20:23:59.72:585,60,0	1/1:4,10:14:29.87:299,30,0	0/0:10,0:10:27.06:0,27,316	0/0:16,0:16:42.72:0,43,414	0/0:19,0:19:49.58:0,50,524	1/1:3,22:24:33.09:390,33,0	1/1:8,2:10:14.97:155,15,0	1/1:7,19:24:41.20:488,41,0	1/1:13,5:18:39:379,39,0	1/1:13,3:17:44.96:425,45,0	1/1:17,0:17:41.85:348,42,0	1/1:8,0:8:8.99:77,9,0	0/0:25,0:24:64.78:0,65,843	0/0:16,0:16:41.68:0,42,439	0/0:24,0:24:64.06:0,64,736	1/1:4,18:22:36.53:399,37,0	1/1:18,6:24:63.74:580,64,0	1/1:9,7:16:47.95:471,48,0	1/1:7,4:10:29.99:288,30,0
chr10	17164132	.	GGA	G	4489.97	PASS	AB=0.897;AC=32;AF=0.571;AN=56;BaseQRankSum=6.629;DP=508;FS=7.973;HRun=0;HaplotypeScore=71.3790;InbreedingCoeff=0.5113;MQ=59.99;MQ0=4;MQRankSum=0.146;QD=13.94;ReadPosRankSum=3.979;VQSLOD=3.9364;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,119,1767	1/1:3,3:6:13.89:126,14,0	0/0:15,0:6:11.76:0,12,137	0/0:16,0:8:13.07:0,13,94	1/1:16,2:19:22.78:241,23,0	0/1:7,0:7:33.42:44,0,33	1/1:17,1:18:25.47:127,25,0	1/1:15,14:32:40.06:789,40,0	0/1:8,0:8:17.17:80,0,17	1/1:21,1:22:33.68:323,34,0	1/1:10,0:11:26.67:139,27,0	0/0:9,0:9:27.07:0,27,415	0/0:17,0:17:32.71:0,33,570	0/0:18,0:18:54.02:0,54,728	1/1:23,0:23:11.12:70,11,0	0/1:7,5:12:35.34:55,0,35	0/1:25,3:26:15.11:151,0,15	0/1:15,3:18:9.92:238,0,10	1/1:6,10:16:18.42:474,18,0	1/1:7,8:15:41.95:512,42,0	1/1:0,9:9:9.03:138,9,0	0/0:26,0:25:72.15:0,72,1185	0/0:17,0:17:42.51:0,43,590	0/0:23,0:23:63.16:0,63,1040	0/1:20,2:22:10.30:133,0,10	1/1:19,5:25:4.09:465,4,0	1/1:15,2:17:14.29:233,14,0	1/1:11,1:11:3.93:151,4,0
chr10	17164837	.	C	CTTT	12913.86	PASS	AB=0.613;AC=46;AF=0.821;AN=56;BaseQRankSum=-2.206;DP=621;FS=0.000;HRun=10;HaplotypeScore=102.0190;InbreedingCoeff=0.0071;MQ=70.96;MQ0=0;MQRankSum=-1.217;QD=21.31;ReadPosRankSum=1.626;VQSLOD=3.2254;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:8,0:34:34.07:53,0,34	1/1:3,16:21:45.09:777,45,0	0/1:12,0:13:6.96:7,0,111	0/0:15,0:15:3.26:0,3,27	1/1:2,16:22:60.14:942,60,0	1/1:2,11:16:33.09:585,33,0	1/1:2,10:13:24.08:461,24,0	1/1:5,0:33:12.51:201,13,0	1/1:3,0:15:30.10:428,30,0	1/1:5,19:23:57.18:1050,57,0	1/1:4,17:25:60.12:978,60,0	0/1:4,0:19:11.31:58,0,11	1/1:1,0:18:17.63:46,18,0	0/1:1,0:17:16.04:20,0,16	1/1:8,15:26:44.63:737,45,0	1/1:3,14:18:45.13:830,45,0	1/1:6,22:32:58.12:994,58,0	1/1:4,33:45:78.20:1341,78,0	0/1:7,0:27:4.45:55,0,4	0/1:3,0:20:16.76:17,0,31	1/1:3,0:13:12.10:28,12,0	1/1:1,0:13:14.95:35,15,0	0/1:3,0:26:28.11:45,0,28	0/1:6,0:16:12.20:12,0,37	1/1:8,15:27:36.06:570,36,0	1/1:4,18:26:68.87:1095,69,0	1/1:5,28:35:81.26:1490,81,0	1/1:1,5:6:3.01:58,3,0
chr10	17165747	.	ACCG	A	1786.58	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=9.728;DP=355;FS=4.878;HRun=0;HaplotypeScore=56.7890;InbreedingCoeff=0.8302;MQ=62.76;MQ0=0;MQRankSum=-3.249;QD=26.27;ReadPosRankSum=-1.682;VQSLOD=2.8980;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:72.22:0,72,1430	0/0:11,0:11:24.06:0,24,455	0/0:2,0:2:3.01:0,3,64	0/0:5,0:5:12.02:0,12,177	0/0:4,0:4:6.02:0,6,115	0/0:8,0:8:24.08:0,24,513	0/0:23,0:23:60.21:0,60,1275	1/1:5,10:15:33.02:434,33,0	0/0:3,0:3:9.03:0,9,193	0/0:20,0:20:43.39:0,43,840	0/0:5,0:5:15.05:0,15,322	0/0:7,0:7:21.07:0,21,451	0/0:8,0:8:21.07:0,21,450	0/0:14,0:14:42.14:0,42,900	0/0:4,0:4:6.02:0,6,129	0/0:4,0:4:9.03:0,9,174	0/0:29,0:29:84.27:0,84,1744	0/0:38,0:38:99:0,105,2252	1/1:3,10:13:30.10:460,30,0	1/1:2,5:7:9.03:137,9,0	1/1:5,28:33:59.78:909,60,0	0/0:7,0:7:18.05:0,18,346	0/0:7,0:7:12.02:0,12,217	0/0:18,0:18:54.19:0,54,1144	0/0:14,0:14:41.13:0,41,722	0/0:11,0:11:24.08:0,24,480	0/0:5,0:4:15.03:0,15,280	0/0:13,0:13:36.12:0,36,750
chr10	17170889	.	CT	C	996.06	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.374;DP=700;FS=6.207;HRun=2;HaplotypeScore=68.5507;InbreedingCoeff=0.9629;MQ=64.70;MQ0=0;MQRankSum=0.391;QD=36.89;ReadPosRankSum=3.041;VQSLOD=4.3915;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,138,2202	0/0:4,0:4:12.04:0,12,189	0/0:31,0:30:90.30:0,90,1423	0/0:26,0:24:69.14:0,69,1008	0/0:27,0:27:78.26:0,78,1232	0/0:31,0:31:87.30:0,87,1374	0/0:22,0:22:66.21:0,66,1028	0/0:36,0:36:99:0,108,1716	1/1:0,27:27:78.26:1091,78,0	0/0:27,0:27:75.26:0,75,1195	0/0:24,0:24:69.21:0,69,1078	0/0:22,0:22:66.23:0,66,1054	0/0:15,0:15:45.15:0,45,717	0/0:18,0:18:54.18:0,54,864	0/0:22,0:22:66.21:0,66,1032	0/0:20,1:21:18.24:0,18,869	0/0:24,0:24:72.25:0,72,1146	0/0:26,0:26:72.12:0,72,1124	0/0:17,0:17:51.16:0,51,794	0/0:37,0:37:99:0,108,1721	0/0:32,0:32:96.33:0,96,1535	0/0:20,0:20:60.20:0,60,944	0/0:22,0:22:66.23:0,66,1055	0/0:26,0:26:75.22:0,75,1151	0/0:22,0:22:63.21:0,63,1006	0/0:32,0:32:96.32:0,96,1512	0/0:32,0:32:96.33:0,96,1532	0/0:11,0:11:33.11:0,33,528
chr10	17171078	.	C	CATAG	4709.07	PASS	AB=0.983;AC=38;AF=0.679;AN=56;BaseQRankSum=7.152;DP=654;FS=5.595;HRun=0;HaplotypeScore=163.3067;InbreedingCoeff=0.7520;MQ=50.52;MQ0=5;MQRankSum=-3.026;QD=9.67;ReadPosRankSum=-0.184;VQSLOD=3.9208;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:38.56:0,39,595	1/1:2,2:4:3.01:73,3,0	0/1:32,0:8:0.91:1,0,31	0/0:11,0:5:3.94:0,4,42	1/1:33,0:33:3.01:69,3,0	1/1:28,0:30:8.71:81,9,0	1/1:15,0:15:11.78:114,12,0	1/1:53,0:51:30.07:345,30,0	1/1:25,0:26:12:146,12,0	1/1:26,0:26:30.10:726,30,0	0/1:28,0:29:0:1,0,0	0/0:21,0:21:45.10:0,45,674	0/0:28,0:28:66.23:0,66,1066	0/0:20,0:20:39.07:0,39,579	1/1:9,8:17:3.01:73,3,0	1/1:27,0:27:14.52:102,15,0	1/1:5,4:9:12.04:284,12,0	1/1:21,0:21:7.77:101,8,0	1/1:16,0:15:26.57:275,27,0	1/1:30,0:30:12.01:126,12,0	1/1:19,0:19:3:25,3,0	0/0:12,0:12:27.09:0,27,435	0/0:24,0:24:51.15:0,51,788	0/0:22,0:22:48.14:0,48,744	1/1:29,0:29:8.99:75,9,0	1/1:33,0:33:46.32:956,46,0	1/1:13,13:27:30.10:725,30,0	1/1:6,5:11:18.06:410,18,0
chr10	17171098	.	GATAGATCAGTAGATACATACATACATAGATAGATAGATAC	G	5653.29	PASS	AB=0.951;AC=26;AF=0.464;AN=56;BaseQRankSum=4.604;DP=620;FS=1.379;HRun=0;HaplotypeScore=466.0596;InbreedingCoeff=0.2538;MQ=53.08;MQ0=5;MQRankSum=-3.912;QD=14.13;ReadPosRankSum=-1.779;VQSLOD=1.6962;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:48.11:0,48,2814	1/1:3,0:3:3.01:73,3,0	0/0:31,0:8:4.53:0,5,156	0/0:13,0:6:10.55:0,11,88	1/1:4,27:32:3.01:70,3,0	0/1:30,0:30:2.32:2,0,704	0/1:12,0:12:13.84:52,0,14	0/1:58,0:56:99:174,0,1692	0/1:22,0:22:99:128,0,147	1/1:0,23:23:57.12:1243,57,0	0/1:1,28:29:0:1,0,0	0/0:22,0:22:57.20:0,57,2628	0/0:28,0:28:81.28:0,81,3865	0/0:17,0:17:48.16:0,48,3049	1/1:9,0:9:3.01:73,3,0	0/1:30,0:30:14.20:14,0,868	1/1:7,0:7:12.04:329,12,0	0/1:17,0:17:95.44:95,0,196	0/1:19,0:17:99:137,0,887	0/1:31,0:31:56.08:56,0,937	0/0:24,0:24:30.10:0,30,812	0/0:11,0:11:33.11:0,33,1860	0/0:20,0:20:57.19:0,57,2928	0/0:26,0:26:66.23:0,66,4427	0/1:23,0:23:57.09:57,0,227	1/1:3,22:25:52.26:1560,52,0	1/1:20,0:20:36.12:1177,36,0	1/1:10,0:10:19.31:413,19,0
chr10	17171122	.	C	CATAGATACATAG	2268.99	PASS	AB=1.000;AC=16;AF=0.296;AN=54;BaseQRankSum=8.216;DP=569;FS=3.313;HRun=0;HaplotypeScore=200.3304;InbreedingCoeff=0.6889;MQ=54.75;MQ0=3;MQRankSum=-4.440;QD=17.19;ReadPosRankSum=-6.097;VQSLOD=0.8466;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:25:42.13:0,42,1447	1/1:2,0:2:5.99:49,6,0	0/0:22,0:10:12.88:0,13,144	0/0:10,0:4:1.55:0,2,4	0/0:27,0:27:0:0,0,0	0/0:29,0:29:28.34:0,28,503	0/0:9,0:10:5.32:0,5,75	0/0:45,0:41:22.04:0,22,842	0/0:18,0:18:14.93:0,15,253	1/1:23,0:23:35.08:531,35,0	./.	0/0:18,0:18:45.10:0,45,1144	0/0:22,0:22:57.03:0,57,1461	0/0:20,0:20:57.12:0,57,1540	1/1:14,0:14:15:174,15,0	0/0:26,0:26:33.11:0,33,554	1/1:8,1:8:5.96:44,6,0	0/1:16,0:16:39.27:39,0,168	0/1:17,0:17:99:100,0,562	0/0:27,0:27:42.14:0,42,703	0/0:26,0:27:36.09:0,36,574	0/0:12,0:12:30.07:0,30,857	0/0:22,0:22:57.12:0,57,1401	0/0:23,0:23:57.18:0,57,1790	0/0:24,0:24:12.04:0,12,206	1/1:23,0:23:39.09:786,39,0	1/1:18,0:18:32.80:414,33,0	1/1:1,5:9:6.02:313,6,0
chr10	17171226	.	T	TATAG	429.12	PASS	AC=2;AF=0.037;AN=54;BaseQRankSum=-1.663;DP=678;FS=2.988;HRun=0;HaplotypeScore=102.7465;InbreedingCoeff=0.8001;MQ=55.05;MQ0=33;MQRankSum=2.435;QD=21.46;ReadPosRankSum=0.894;VQSLOD=3.0487;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:24:35.79:0,36,529	0/0:6,0:6:15.05:0,15,247	0/0:42,0:2:0:0,0,0	./.	0/0:23,0:22:36.09:0,36,559	0/0:17,0:16:27.02:0,27,352	0/0:15,0:15:5.61:0,6,98	0/0:49,0:39:69.14:0,69,961	1/1:11,9:20:24.05:522,24,0	0/0:33,0:33:75.23:0,75,1213	0/0:29,0:29:69.22:0,69,1157	0/0:13,0:13:36.12:0,36,605	0/0:31,0:30:69.17:0,69,1079	0/0:21,0:20:57.14:0,57,926	0/0:28,0:28:45.13:0,45,740	0/0:30,0:30:32.84:0,33,421	0/0:17,0:15:17.98:0,18,248	0/0:24,0:23:51:0,51,735	0/0:15,0:15:42.09:0,42,647	0/0:40,0:40:99:0,102,1621	0/0:18,0:18:33.08:0,33,495	0/0:13,0:13:33.09:0,33,526	0/0:27,0:27:54.17:0,54,892	0/0:14,0:14:30.04:0,30,429	0/0:14,0:14:24.05:0,24,359	0/0:29,0:29:78.25:0,78,1317	0/0:34,0:33:48.13:0,48,738	0/0:13,0:13:33.11:0,33,527
chr10	17171258	.	GATAC	G	701.44	PASS	AB=0.882;AC=6;AF=0.115;AN=52;BaseQRankSum=2.272;DP=651;FS=8.832;HRun=0;HaplotypeScore=131.4040;InbreedingCoeff=-0.1174;MQ=52.55;MQ0=14;MQRankSum=0.551;QD=5.57;ReadPosRankSum=-3.938;VQSLOD=0.6821;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:26:53.27:0,53,969	0/0:6,0:6:15.01:0,15,162	./.	./.	0/0:24,0:23:43.27:0,43,275	0/0:18,0:17:29.55:0,30,363	0/1:14,0:14:16.10:42,0,16	0/0:36,0:23:62.58:0,63,517	0/1:18,0:18:23.16:23,0,92	0/0:26,0:26:48.47:0,48,492	0/0:34,0:33:75.24:0,75,549	0/0:19,0:19:47.07:0,47,709	0/0:27,0:26:66.01:0,66,1179	0/0:24,0:23:66.04:0,66,1094	0/0:27,0:27:32.99:0,33,328	0/0:28,0:27:6.50:0,7,581	0/1:6,18:23:55.88:417,0,56	0/1:17,11:27:99:287,0,182	0/0:20,0:18:50.92:0,51,712	0/0:39,0:39:99:0,111,1736	0/1:22,0:22:47.30:47,0,136	0/0:14,0:14:36.04:0,36,653	0/0:21,0:21:51.03:0,51,852	0/0:12,0:12:30.04:0,30,571	0/1:20,0:20:1.94:2,0,441	0/0:33,0:33:34.69:0,35,640	0/0:33,0:32:41:0,41,371	0/0:24,0:23:39.35:0,39,262
chr10	17171262	.	C	CATAG	5658.43	PASS	AB=0.920;AC=25;AF=0.481;AN=52;BaseQRankSum=-9.136;DP=650;FS=4.547;HRun=0;HaplotypeScore=114.4042;InbreedingCoeff=0.7194;MQ=53.12;MQ0=9;MQRankSum=0.374;QD=16.89;ReadPosRankSum=-2.411;VQSLOD=3.7430;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:16.03:0,16,499	1/1:3,3:6:9.03:213,9,0	./.	./.	1/1:11,13:24:21.07:497,21,0	0/0:18,0:17:20.52:0,21,221	1/1:13,0:13:0.89:2,1,0	0/0:39,0:26:23.88:0,24,223	1/1:14,3:17:27.07:481,27,0	1/1:14,11:26:33.10:670,33,0	1/1:19,15:33:18.06:426,18,0	0/1:13,6:19:99:254,0,250	0/0:27,0:26:42.11:0,42,602	0/0:24,0:23:30.10:0,30,463	1/1:12,15:29:6.02:142,6,0	0/0:27,0:26:19.48:0,19,393	0/1:24,0:23:12.40:12,0,32	0/1:26,0:25:8.63:9,0,30	0/0:19,0:18:18.05:0,18,260	0/0:37,0:37:48.14:0,48,705	1/1:17,5:22:32.99:638,33,0	0/0:15,0:15:24.07:0,24,351	0/0:22,0:22:30.09:0,30,436	0/0:12,0:12:18.02:0,18,254	0/0:20,0:20:25.92:0,26,268	1/1:16,18:35:51.11:1039,51,0	1/1:15,19:35:15.05:354,15,0	1/1:4,20:23:39.13:922,39,0
chr10	17172270	.	TCA	T	1432.18	PASS	AB=0.777;AC=28;AF=0.583;AN=48;BaseQRankSum=0.886;DP=628;FS=3.480;HRun=0;HaplotypeScore=98.1371;InbreedingCoeff=0.5296;MQ=65.03;MQ0=16;MQRankSum=-0.783;QD=4.59;ReadPosRankSum=1.249;VQSLOD=2.7322;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:36:23.55:0,24,189	1/1:4,1:6:5.85:47,6,0	./.	./.	1/1:6,5:11:9.02:98,9,0	0/1:10,5:15:32.40:68,0,32	1/1:13,14:27:30.08:327,30,0	./.	0/1:24,2:26:41.41:41,0,215	1/1:22,0:22:2.93:33,3,0	1/1:6,4:10:9.02:98,9,0	0/0:27,0:25:12.50:0,13,154	0/0:19,0:18:12.01:0,12,117	0/0:15,0:21:6.88:0,7,54	0/0:34,1:35:12.42:0,12,594	1/1:12,0:24:22.59:112,23,0	0/1:23,11:34:18:198,0,18	1/1:15,0:23:14.20:70,14,0	1/1:10,0:17:14.20:70,14,0	1/1:7,0:16:9.73:44,10,0	0/1:20,0:33:0:0,0,0	0/0:8,0:15:5.84:0,6,40	./.	0/0:27,0:29:2.78:0,3,26	1/1:6,0:10:9.77:45,10,0	0/0:13,0:13:6.02:0,6,88	1/1:9,10:20:16.44:175,16,0	1/1:8,6:15:17.88:178,18,0
chr10	17173484	.	G	GCCACCAGAACA	49217.33	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-3.258;DP=726;FS=32.393;HRun=0;HaplotypeScore=214.8092;InbreedingCoeff=0.9994;MQ=69.29;MQ0=0;MQRankSum=-18.453;QD=104.05;ReadPosRankSum=-4.088;VQSLOD=2.8924;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,151,4867	1/1:6,7:13:30.10:1480,30,0	0/0:25,0:25:45.15:0,45,1344	0/0:18,0:18:37.89:0,38,1040	1/1:8,7:15:30.10:1244,30,0	1/1:11,10:24:51.17:2233,51,0	1/1:15,7:25:57.19:2691,57,0	1/1:30,4:37:99:4228,102,0	1/1:15,8:28:60.05:2883,60,0	1/1:11,6:19:46.40:2065,46,0	1/1:6,8:15:33.11:1639,33,0	0/0:31,0:31:75.26:0,75,2477	0/0:30,0:30:84.27:0,84,2629	0/0:26,0:26:75.22:0,75,2326	1/1:12,21:34:75.26:3763,75,0	1/1:16,14:35:72.25:3703,72,0	1/1:12,15:30:57.19:2839,57,0	1/1:17,9:30:54.18:2661,54,0	1/1:15,3:20:54.05:1868,54,0	1/1:9,13:21:60.20:2852,60,0	1/1:16,5:30:33.11:1537,33,0	0/0:14,0:14:42.14:0,42,1399	0/0:17,0:17:48.16:0,48,1548	0/0:40,0:40:99:0,108,3457	1/1:7,8:19:39.13:2172,39,0	1/1:16,20:38:99:4706,102,0	1/1:12,12:25:63.22:3333,63,0	1/1:2,6:9:24.08:1319,24,0
chr10	17174174	.	TTGTGTG	T	1816.43	PASS	AB=0.929;AC=19;AF=0.365;AN=52;BaseQRankSum=-0.819;DP=723;FS=3.573;HRun=0;HaplotypeScore=176.1885;InbreedingCoeff=0.7601;MQ=49.85;MQ0=13;MQRankSum=-4.438;QD=7.60;ReadPosRankSum=3.959;VQSLOD=2.5849;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:12.72:0,13,314	1/1:8,6:14:9.03:161,9,0	./.	./.	1/1:15,6:23:2.69:20,3,0	0/0:20,0:39:32.38:0,32,392	0/0:19,0:27:26.11:0,26,463	0/0:23,0:22:18.05:0,18,274	1/1:18,0:32:15.94:211,16,0	0/1:24,2:24:44.36:197,0,44	1/1:12,6:19:3:47,3,0	0/0:9,0:14:12.02:0,12,144	0/0:14,0:14:21.03:0,21,312	0/0:15,0:20:3.48:0,3,37	1/1:14,12:27:12.39:245,12,0	0/0:13,0:21:14.67:0,15,205	1/1:21,10:32:15.04:259,15,0	0/0:13,0:27:18.06:0,18,383	0/0:24,0:22:30.03:0,30,630	0/0:13,0:14:9.03:0,9,173	0/0:40,0:39:18.70:0,19,288	0/0:16,0:26:17.08:0,17,242	0/0:24,0:23:9.03:0,9,175	0/0:40,0:39:24.04:0,24,541	0/0:16,0:21:25.98:0,26,471	1/1:24,8:32:27.04:496,27,0	1/1:13,7:21:9.25:183,9,0	1/1:9,3:12:9.50:184,10,0
chr10	17177168	.	G	GGATA	21461.36	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-11.543;DP=696;FS=10.829;HRun=0;HaplotypeScore=105.5403;InbreedingCoeff=0.9993;MQ=89.22;MQ0=0;MQRankSum=-5.901;QD=63.50;ReadPosRankSum=4.580;VQSLOD=6.7165;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,111,2041	1/1:2,6:8:21.07:558,21,0	0/0:29,0:29:63.61:0,64,1197	0/0:25,0:25:54.18:0,54,967	1/1:5,20:25:62.87:1651,63,0	1/1:3,13:16:42.14:1116,42,0	1/1:9,28:41:87.30:2251,87,0	0/0:39,0:39:96.30:0,96,1715	1/1:4,15:21:48.16:1278,48,0	1/1:2,24:28:78.25:1958,78,0	1/1:0,22:22:54.19:1438,54,0	0/0:25,0:25:66.21:0,66,1200	0/0:18,0:18:51.17:0,51,946	0/0:24,0:24:72.24:0,72,1315	1/1:1,20:22:51.17:1358,51,0	1/1:3,23:29:63.22:1679,63,0	1/1:8,20:28:60.21:1575,60,0	1/1:3,22:26:60.21:1600,60,0	0/0:30,0:30:81.27:0,81,1469	0/0:21,0:21:63.22:0,63,1172	0/0:43,0:43:99:0,120,2168	0/0:19,0:19:48.16:0,48,896	0/0:22,0:22:63.15:0,63,1171	0/0:23,0:23:54.14:0,54,977	1/1:3,12:17:39.13:1028,39,0	1/1:2,25:27:81.27:2072,81,0	1/1:2,14:15:45.15:1179,45,0	1/1:2,10:12:27.09:720,27,0
chr10	17179093	.	AGTGTGTGT	A	2813.04	PASS	AB=0.679;AC=13;AF=0.241;AN=54;BaseQRankSum=2.638;DP=702;FS=2.756;HRun=0;HaplotypeScore=202.0276;InbreedingCoeff=0.7806;MQ=60.07;MQ0=15;MQRankSum=-7.735;QD=13.27;ReadPosRankSum=0.264;VQSLOD=2.9674;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:19,16:35:2.36:105,0,2	0/0:5,0:8:9.02:0,9,161	./.	0/0:29,0:21:2.98:0,3,21	0/0:15,0:15:14.98:0,15,122	0/0:21,0:19:26.77:0,27,619	0/0:21,0:22:14.21:0,14,633	0/0:41,0:37:39.01:0,39,587	0/0:12,0:12:14.99:0,15,222	0/0:21,0:37:69.11:0,69,1142	0/0:7,0:11:5.74:0,6,129	1/1:19,13:32:4.64:621,5,0	1/1:16,14:27:6.29:686,6,0	1/1:11,13:24:28.69:613,29,0	0/0:14,0:17:18.04:0,18,350	0/0:17,0:17:32.90:0,33,963	0/0:31,0:41:64.07:0,64,1212	0/0:17,0:17:33.08:0,33,1142	0/0:15,0:15:11.24:0,11,158	0/0:15,0:25:12.63:0,13,283	0/0:50,0:53:69.55:0,70,1496	1/1:15,18:36:6.18:335,6,0	1/1:13,14:27:13.94:308,14,0	1/1:19,4:26:18.35:315,18,0	0/0:12,0:14:26.84:0,27,590	0/0:20,0:26:31.98:0,32,539	0/0:18,0:23:33.45:0,33,550	0/0:4,0:9:21.92:0,22,373
chr10	17179130	.	GTA	G	1016.92	PASS	AB=0.969;AC=19;AF=0.339;AN=56;BaseQRankSum=7.699;DP=803;FS=23.524;HRun=0;HaplotypeScore=167.3529;InbreedingCoeff=-0.3349;MQ=48.19;MQ0=35;MQRankSum=-0.669;QD=2.04;ReadPosRankSum=2.901;VQSLOD=1.2106;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:42:38.87:0,39,287	0/1:12,1:13:23.99:24,0,137	0/0:52,0:7:13.83:0,14,96	0/1:65,0:8:22.63:23,0,80	0/0:14,1:14:35.42:0,35,274	0/0:19,0:18:22.80:0,23,373	0/0:26,0:26:31.34:0,31,605	0/1:37,0:29:64.47:64,0,407	1/1:16,3:19:35.96:341,36,0	0/1:34,0:33:99:116,0,340	0/0:11,0:11:0.41:0,0,96	0/1:28,0:28:14.57:15,0,155	0/1:27,0:26:3.02:3,0,161	0/1:30,0:30:15.83:16,0,193	0/1:21,1:22:51.48:51,0,237	0/1:18,0:18:4.23:4,0,385	0/1:35,3:38:99:242,0,290	0/0:22,0:21:26.62:0,27,468	0/0:13,0:10:18.04:0,18,165	0/1:21,0:20:11.48:11,0,184	0/0:77,0:76:74.27:0,74,1064	0/1:28,0:29:7.10:7,0,91	0/0:25,0:26:27.05:0,27,193	0/1:33,0:32:17.94:18,0,193	0/1:17,0:17:12.45:12,0,281	0/1:26,2:26:73.48:73,0,290	0/1:22,2:23:94.99:95,0,205	0/1:11,0:10:45.19:60,0,45
chr10	17179206	.	ATG	A	380.38	PASS	AB=0.920;AC=3;AF=0.054;AN=56;BaseQRankSum=5.720;DP=985;FS=14.463;HRun=0;HaplotypeScore=133.3165;InbreedingCoeff=0.6260;MQ=54.27;MQ0=33;MQRankSum=0.476;QD=8.27;ReadPosRankSum=0.807;VQSLOD=2.6013;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,135,2183	0/0:18,0:18:48.16:0,48,756	0/0:66,0:6:11.80:0,12,103	0/0:61,0:14:15.01:0,15,204	0/0:17,0:17:30.10:0,30,483	0/0:23,0:23:63.20:0,63,1009	0/0:47,2:49:64.88:0,65,1852	0/0:38,0:35:75.19:0,75,1201	1/1:5,18:23:36.12:463,36,0	0/0:24,0:21:63.20:0,63,1018	0/0:24,0:24:63.21:0,63,1047	0/0:38,0:38:96.33:0,96,1578	0/0:26,0:26:69.23:0,69,1113	0/0:31,0:31:81.22:0,81,1314	0/1:21,2:23:23.02:23,0,738	0/0:22,0:22:57.19:0,57,946	0/0:41,0:41:99:0,99,1630	0/0:30,0:30:73:0,73,1280	0/0:28,0:23:48.14:0,48,755	0/0:30,0:30:81.24:0,81,1280	0/0:121,1:120:99:0,238,4150	0/0:26,0:26:68.87:0,69,1063	0/0:18,0:18:48.16:0,48,804	0/0:66,0:64:99:0,147,2371	0/0:24,0:24:60.19:0,60,968	0/0:33,0:33:93.32:0,93,1531	0/0:23,0:23:63.19:0,63,971	0/0:9,0:9:24.08:0,24,402
chr10	17179282	.	G	GGT	5000.66	PASS	AB=0.623;AC=16;AF=0.286;AN=56;BaseQRankSum=-8.515;DP=947;FS=16.717;HRun=0;HaplotypeScore=124.7377;InbreedingCoeff=0.7930;MQ=55.43;MQ0=35;MQRankSum=1.989;QD=21.65;ReadPosRankSum=2.969;VQSLOD=4.4165;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:55:99:0,141,1626	1/1:3,8:12:12.04:197,12,0	0/0:63,0:14:23.31:0,23,219	0/0:58,0:13:7.54:0,8,104	1/1:2,15:16:36.12:563,36,0	0/0:24,0:24:36.09:0,36,421	0/0:36,0:36:87.69:0,88,1047	0/0:35,0:33:52.35:0,52,643	0/0:21,0:21:54.05:0,54,627	1/1:6,22:30:8.84:1001,9,0	0/1:7,13:20:44.04:341,0,44	0/0:38,0:38:93.26:0,93,1127	0/0:23,0:23:54.13:0,54,645	0/0:34,0:34:81.12:0,81,934	1/1:9,30:38:45.14:713,45,0	0/0:19,0:20:47.98:0,48,566	1/1:9,31:40:29.71:904,30,0	0/0:25,0:25:51.12:0,51,591	0/0:25,0:21:33.08:0,33,384	0/0:26,0:25:68.39:0,68,806	0/0:110,0:110:99:0,223,2666	0/0:24,0:26:68.71:0,69,778	0/0:18,0:19:38.78:0,39,460	0/0:50,0:50:99:0,115,1357	0/0:22,0:22:54.16:0,54,651	1/1:17,16:31:48.16:751,48,0	1/1:7,11:21:10.96:248,11,0	0/1:7,8:16:13.39:283,0,13
chr10	17179557	.	G	GT	4080.24	PASS	AB=0.902;AC=20;AF=0.357;AN=56;BaseQRankSum=-0.999;DP=611;FS=2.585;HRun=10;HaplotypeScore=70.2938;InbreedingCoeff=0.8744;MQ=78.47;MQ0=2;MQRankSum=-0.375;QD=19.52;ReadPosRankSum=1.977;VQSLOD=4.7718;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:68.69:0,69,736	1/1:3,5:9:17.88:174,18,0	0/0:19,0:17:24.30:0,24,202	0/0:23,0:21:21.24:0,21,266	1/1:2,17:19:45.11:480,45,0	0/0:21,0:21:53.93:0,54,443	0/0:28,0:28:74.90:0,75,616	0/0:27,0:27:33.66:0,34,398	0/0:26,0:26:71.91:0,72,591	1/1:3,16:19:45.10:472,45,0	1/1:5,15:21:25.87:469,26,0	0/0:22,2:24:36.91:0,37,506	0/0:21,0:21:59.90:0,60,489	0/0:18,0:18:44.92:0,45,369	1/1:2,15:17:41.97:431,42,0	0/0:19,0:19:38.93:0,39,320	1/1:5,21:26:38.49:604,38,0	0/0:23,0:23:62.88:0,63,511	0/1:18,3:22:6.05:6,0,361	0/0:23,1:24:27.94:0,28,436	0/1:11,1:12:5.02:5,0,170	0/0:20,1:21:24.94:0,25,411	0/0:29,1:30:48.90:0,49,605	0/0:19,0:19:53.90:0,54,439	0/0:25,0:25:70.71:0,71,567	1/1:2,12:14:36.09:384,36,0	1/1:7,29:36:65.91:703,66,0	1/1:1,12:13:33.08:352,33,0
chr10	17181152	.	AT	A	12520.36	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=9.388;DP=669;FS=1.803;HRun=6;HaplotypeScore=67.1462;InbreedingCoeff=0.9998;MQ=76.66;MQ0=1;MQRankSum=-2.065;QD=27.82;ReadPosRankSum=2.378;VQSLOD=5.6492;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,105,1381	1/1:1,10:11:30.08:322,30,0	0/0:23,0:22:54.16:0,54,661	0/0:20,0:18:42.02:0,42,456	1/1:2,19:21:42.10:451,42,0	1/1:1,12:13:36.09:387,36,0	1/1:2,21:23:60.15:645,60,0	1/1:4,27:31:81.20:871,81,0	1/1:2,19:21:57.14:613,57,0	1/1:2,21:23:63.14:669,63,0	1/1:2,20:22:57.14:612,57,0	0/0:24,0:24:69.22:0,69,908	0/0:27,0:27:78.25:0,78,1026	0/0:27,0:27:72.18:0,72,911	1/1:0,29:29:78.20:838,78,0	1/1:4,28:32:75.18:806,75,0	1/1:0,42:42:99:1225,114,0	1/1:2,26:28:72.18:774,72,0	1/1:2,16:18:45.11:484,45,0	1/1:1,25:26:72.18:774,72,0	1/1:0,29:29:84.21:903,84,0	0/0:21,0:21:60.20:0,60,789	0/0:20,0:20:51.17:0,51,670	0/0:22,0:22:60.19:0,60,788	1/1:1,21:22:51.13:548,51,0	1/1:3,29:32:87.18:922,87,0	1/1:1,14:15:33.08:355,33,0	1/1:2,10:12:30.08:322,30,0
chr10	17182040	.	GT	G	8463.52	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=-12.820;DP=513;FS=3.206;HRun=9;HaplotypeScore=63.1111;InbreedingCoeff=0.9852;MQ=81.51;MQ0=0;MQRankSum=-3.240;QD=22.16;ReadPosRankSum=0.876;VQSLOD=5.8363;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,35:40:99:933,102,0	1/1:0,6:6:17.96:156,18,0	0/0:16,0:17:23.41:0,23,228	0/0:16,0:15:23.62:0,24,211	1/1:3,23:26:65.98:596,66,0	0/0:2,0:18:37.10:0,37,208	0/0:6,0:20:28.57:0,29,229	1/1:10,22:32:59.90:520,60,0	1/1:2,11:14:24.42:315,24,0	1/1:5,15:20:44.97:404,45,0	1/1:2,12:14:36.02:329,36,0	1/1:2,13:15:30.02:274,30,0	1/1:3,10:13:30.01:275,30,0	1/1:1,13:14:39.02:357,39,0	1/1:3,14:18:41.06:363,41,0	0/0:1,1:15:12.48:0,12,160	1/1:0,22:22:57.03:522,57,0	0/0:6,0:29:65.52:0,66,341	1/1:3,13:16:36.01:329,36,0	1/1:0,22:22:63.03:576,63,0	1/1:3,5:8:12:110,12,0	1/1:1,12:13:32.94:292,33,0	1/1:2,25:27:75.04:686,75,0	1/1:0,12:12:30.02:275,30,0	0/0:4,0:15:34.12:0,34,174	1/1:2,16:18:48.02:439,48,0	1/1:3,21:24:57.03:522,57,0	1/1:0,8:8:21.01:192,21,0
chr10	17182785	.	TG	T	3395.04	PASS	AB=1.000;AC=51;AF=0.944;AN=54;BaseQRankSum=-1.732;DP=161;FS=2.082;HRun=6;HaplotypeScore=32.1676;InbreedingCoeff=0.2778;MQ=78.10;MQ0=0;MQRankSum=0.085;QD=22.34;ReadPosRankSum=0.971;VQSLOD=2.3438;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,11:14:30.07:321,30,0	1/1:0,2:2:3.01:32,3,0	0/0:6,0:3:6.01:0,6,68	0/1:9,0:9:4.98:5,0,33	1/1:4,4:8:12.03:126,12,0	1/1:1,0:1:3.01:32,3,0	1/1:1,4:5:6.02:64,6,0	1/1:3,3:6:9.02:97,9,0	1/1:1,8:9:21.05:226,21,0	1/1:0,3:3:9.02:96,9,0	1/1:2,3:5:9.02:97,9,0	1/1:2,3:5:9.02:96,9,0	1/1:2,6:8:18.04:188,18,0	1/1:2,10:12:33.08:353,33,0	1/1:5,4:9:12.03:127,12,0	1/1:0,2:2:6.02:64,6,0	1/1:1,3:4:9.02:96,9,0	./.	1/1:0,2:2:6.02:65,6,0	1/1:1,5:6:15.04:160,15,0	1/1:2,7:9:18.04:193,18,0	1/1:1,7:8:21.05:225,21,0	1/1:0,3:3:9.02:96,9,0	1/1:1,2:3:6.01:64,6,0	1/1:1,0:1:3.01:32,3,0	1/1:0,9:9:27.05:281,27,0	1/1:1,3:4:9.02:97,9,0	1/1:1,4:5:15.04:161,15,0
chr10	17183529	.	G	GC	3878.42	PASS	AB=0.925;AC=37;AF=0.661;AN=56;BaseQRankSum=15.364;DP=577;FS=1.999;HRun=7;HaplotypeScore=116.3355;InbreedingCoeff=0.5745;MQ=87.66;MQ0=2;MQRankSum=-6.781;QD=9.51;ReadPosRankSum=3.728;VQSLOD=1.3886;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:28:48.84:147,49,0	1/1:5,0:5:11.49:61,11,0	0/0:30,0:30:56.62:0,57,607	0/0:18,0:18:42.01:0,42,394	1/1:13,0:13:23.57:108,24,0	0/0:26,0:26:72.11:0,72,695	0/0:28,0:28:75.09:0,75,717	1/1:8,17:25:51.09:572,51,0	0/1:29,0:28:28.40:89,0,28	1/1:12,0:13:2.03:53,2,0	1/1:8,0:8:11.36:56,11,0	1/1:24,0:24:20.79:111,21,0	1/1:17,0:17:9.75:78,10,0	0/1:23,0:23:35.18:75,0,35	1/1:15,0:15:25.57:125,26,0	0/0:23,0:23:45.91:0,46,485	1/1:15,0:15:21.92:103,22,0	0/0:29,0:29:87.12:0,87,834	1/1:4,12:16:34.09:416,34,0	0/1:4,6:10:3.81:208,0,4	1/1:20,25:45:80.75:1005,81,0	0/1:19,0:19:38.05:38,0,102	1/1:18,0:19:11.18:77,11,0	0/1:30,0:29:12.02:107,0,12	0/0:15,0:15:39.06:0,39,376	1/1:22,0:22:25.15:208,25,0	1/1:22,0:22:35.73:172,36,0	1/1:8,0:8:14.20:70,14,0
chr10	17183535	.	C	CCA	9733.91	PASS	AB=1.000;AC=35;AF=0.625;AN=56;BaseQRankSum=-4.496;DP=626;FS=1.094;HRun=0;HaplotypeScore=118.9107;InbreedingCoeff=0.9354;MQ=86.24;MQ0=2;MQRankSum=-6.877;QD=26.60;ReadPosRankSum=6.214;VQSLOD=5.6489;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,28:31:66.23:1112,66,0	1/1:1,0:6:9:78,9,0	0/0:29,0:29:72.31:0,72,863	0/0:19,0:19:54.13:0,54,645	1/1:0,0:17:26.01:209,26,0	0/0:28,0:28:69.14:0,69,821	0/0:30,0:30:72.17:0,72,865	0/0:24,0:23:34.67:0,35,182	1/1:3,25:27:66.23:1112,66,0	1/1:2,0:15:20.97:176,21,0	1/1:1,0:7:12:108,12,0	1/1:1,26:27:63.69:1062,64,0	1/1:1,18:19:48.16:808,48,0	1/1:4,21:25:57.20:960,57,0	1/1:2,0:19:29.94:257,30,0	0/0:22,0:22:54.13:0,54,647	1/1:2,0:19:26.93:223,27,0	0/0:32,0:32:84.26:0,84,1078	0/1:16,0:15:1.97:2,0,56	0/0:11,0:11:15.26:0,15,116	0/0:48,0:48:34.29:0,34,259	1/1:5,13:18:36.12:606,36,0	1/1:3,17:21:42.14:699,42,0	1/1:4,30:34:78.27:1314,78,0	0/0:17,0:17:45.13:0,45,555	1/1:1,0:31:69.04:553,69,0	1/1:1,0:22:38:319,38,0	1/1:0,1:10:15:135,15,0
chr10	17183785	.	GC	G	3745.73	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=14.055;DP=413;FS=6.968;HRun=1;HaplotypeScore=62.2173;InbreedingCoeff=0.9401;MQ=76.09;MQ0=0;MQRankSum=-1.032;QD=33.75;ReadPosRankSum=1.401;VQSLOD=3.2049;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:93.23:0,93,1366	1/1:1,4:5:9.03:126,9,0	0/0:9,0:9:27.07:0,27,343	0/0:10,0:10:20.33:0,20,300	1/1:0,6:6:9.03:125,9,0	0/0:11,0:11:33.11:0,33,497	0/0:19,0:19:57.19:0,57,869	0/0:17,0:17:48.05:0,48,615	0/0:15,0:15:45.12:0,45,656	1/1:0,10:10:26.73:250,27,0	1/1:0,4:4:12.04:167,12,0	0/0:14,0:14:42.13:0,42,619	0/0:9,0:9:27.03:0,27,363	0/0:14,0:14:42.06:0,42,590	1/1:0,10:10:24.08:335,24,0	0/0:3,0:3:6.02:0,6,91	1/1:0,44:44:99:1633,117,0	0/0:33,0:33:96.27:0,96,1416	0/0:10,0:9:30.10:0,30,453	0/0:3,0:3:9.03:0,9,137	0/0:38,0:38:99:0,111,1609	0/0:10,0:10:30.09:0,30,436	0/0:5,0:5:12.04:0,12,183	0/0:33,0:33:96.22:0,96,1388	0/0:16,0:16:48.16:0,48,729	1/1:0,12:12:36.09:482,36,0	1/1:0,14:14:33.11:460,33,0	1/1:0,6:6:12.04:167,12,0
chr10	17184683	.	A	AG	3813.09	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=12.439;DP=437;FS=0.000;HRun=0;HaplotypeScore=55.8643;InbreedingCoeff=0.9788;MQ=83.76;MQ0=0;MQRankSum=-0.470;QD=38.91;ReadPosRankSum=1.330;VQSLOD=3.6677;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:78.25:0,78,1073	1/1:0,4:4:9.03:140,9,0	0/0:9,0:9:22.63:0,23,254	0/0:17,0:17:26.74:0,27,458	1/1:0,5:5:15.05:240,15,0	0/0:21,0:21:63.21:0,63,881	0/0:23,0:23:69.21:0,69,944	0/0:21,0:21:57.18:0,57,781	0/0:14,0:14:42.14:0,42,587	1/1:1,5:6:15.05:240,15,0	1/1:0,9:9:18.06:288,18,0	0/0:24,0:24:72.23:0,72,990	0/0:13,0:13:39.13:0,39,545	0/0:17,0:17:48.15:0,48,645	1/1:0,8:8:21.07:324,21,0	0/0:19,0:19:57.19:0,57,797	1/1:2,37:39:96.33:1535,96,0	0/0:22,0:22:63.15:0,63,837	0/0:16,0:16:42.12:0,42,568	0/0:13,0:13:36.12:0,36,503	0/0:26,0:26:78.26:0,78,1080	0/0:14,0:14:36.12:0,36,500	0/0:8,0:8:15.05:0,15,209	0/0:25,0:25:75.25:0,75,1046	0/0:11,0:11:30.10:0,30,418	1/1:2,8:10:24.08:376,24,0	1/1:0,9:9:24.08:384,24,0	1/1:1,7:8:18.06:287,18,0
chr10	17184802	.	AC	A	14103.92	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-2.771;DP=574;FS=17.805;HRun=7;HaplotypeScore=66.1966;InbreedingCoeff=0.9899;MQ=81.61;MQ0=0;MQRankSum=-8.240;QD=26.17;ReadPosRankSum=5.075;VQSLOD=3.4327;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:14,40:54:99:1070,105,0	1/1:1,9:10:27.06:275,27,0	0/0:17,0:17:25.77:0,26,348	0/0:18,0:18:38.31:0,38,443	1/1:0,15:15:42.09:428,42,0	1/1:3,26:29:75.17:764,75,0	1/1:2,23:25:69.16:704,69,0	1/1:6,24:30:72.14:723,72,0	1/1:3,13:16:42.09:428,42,0	1/1:2,21:23:63.14:642,63,0	1/1:1,11:12:33.07:337,33,0	1/1:1,23:24:63.10:631,63,0	1/1:1,16:17:48.11:489,48,0	1/1:1,18:19:54.08:539,54,0	1/1:0,14:14:36.08:367,36,0	1/1:1,19:20:54.12:551,54,0	1/1:5,18:23:51.11:520,51,0	1/1:0,19:19:54.12:551,54,0	1/1:3,15:18:45.10:458,45,0	1/1:0,14:14:39.09:397,39,0	1/1:1,24:25:72.16:734,72,0	1/1:0,25:25:72.12:723,72,0	1/1:4,14:18:30.05:306,30,0	1/1:0,23:23:63.14:643,63,0	1/1:0,15:15:33.07:336,33,0	1/1:0,32:32:96.20:967,96,0	1/1:2,12:14:36.08:367,36,0	1/1:0,5:5:15.03:153,15,0
chr10	17184984	.	GGGACGTCGTCTGA	G	11559.75	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=11.586;DP=565;FS=7.594;HRun=0;HaplotypeScore=219.6089;InbreedingCoeff=0.9868;MQ=75.58;MQ0=0;MQRankSum=-13.362;QD=68.40;ReadPosRankSum=4.063;VQSLOD=3.4348;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,31:44:60.16:2271,60,0	0/0:4,0:4:9.03:0,9,596	0/0:15,0:15:45.15:0,45,2654	0/0:14,0:14:39.13:0,39,1908	0/0:13,0:13:36.12:0,36,2141	0/0:18,0:18:51.16:0,51,3102	0/0:39,0:39:99:0,111,6587	0/0:21,0:21:63.22:0,63,3670	1/1:1,9:10:27.09:1087,27,0	0/0:10,0:10:27.09:0,27,1618	0/0:11,0:11:21.07:0,21,1175	1/1:2,23:25:60.21:2371,60,0	1/1:4,11:15:21.07:845,21,0	1/1:4,16:20:54.19:1987,54,0	0/0:22,0:22:66.21:0,66,3734	0/0:14,0:14:39.13:0,39,2458	0/0:38,0:38:99:0,108,6497	0/0:26,0:26:72.21:0,72,4390	0/0:14,0:14:42.14:0,42,2360	0/0:11,0:11:24.08:0,24,1458	0/0:53,0:53:99:0,144,8536	1/1:1,13:14:27.05:987,27,0	1/1:4,13:17:21.91:662,22,0	1/1:5,19:24:36.33:1350,36,0	0/0:16,0:16:42.14:0,42,2571	0/0:24,0:24:72.25:0,72,4170	0/0:23,0:23:63.22:0,63,3750	0/0:10,0:10:21.07:0,21,1301
chr10	17185070	.	ACTT	A	7347.90	PASS	AB=0.515;AC=17;AF=0.304;AN=56;BaseQRankSum=1.136;DP=552;FS=0.359;HRun=0;HaplotypeScore=127.0942;InbreedingCoeff=0.9152;MQ=86.02;MQ0=0;MQRankSum=-4.296;QD=45.36;ReadPosRankSum=1.381;VQSLOD=6.1629;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:81.28:0,81,1913	0/0:9,0:9:27.09:0,27,638	0/0:19,0:19:54.09:0,54,1060	0/0:24,0:24:62.77:0,63,1306	0/0:16,0:16:48.16:0,48,1082	1/1:0,16:16:45.15:791,45,0	1/1:0,21:21:57.20:1004,57,0	1/1:0,19:19:48.13:789,48,0	0/0:17,0:17:51.17:0,51,1174	0/0:23,0:23:63.22:0,63,1441	0/0:21,0:21:60.66:0,61,1372	0/0:24,0:24:63.18:0,63,1390	0/0:20,0:20:51.18:0,51,1187	0/0:18,0:18:51.11:0,51,1105	0/0:22,0:21:66.23:0,66,1552	0/1:1,16:17:22.81:746,0,23	0/0:34,0:34:96.33:0,96,2261	1/1:1,26:27:72.25:1269,72,0	1/1:0,14:14:39.13:688,39,0	1/1:0,17:17:39.13:686,39,0	1/1:1,19:20:48.16:847,48,0	0/0:20,0:20:54.19:0,54,1276	0/0:11,0:11:26.89:0,27,638	0/0:27,0:27:69.19:0,69,1578	1/1:1,10:11:30.10:529,30,0	0/0:27,0:27:78.27:0,78,1839	0/0:14,0:14:42.14:0,42,993	0/0:8,0:8:24.08:0,24,568
chr10	17185155	.	G	GA	7580.40	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-3.009;DP=525;FS=10.252;HRun=9;HaplotypeScore=80.2478;InbreedingCoeff=0.9052;MQ=81.69;MQ0=1;MQRankSum=-2.803;QD=24.14;ReadPosRankSum=0.624;VQSLOD=5.0921;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:83.93:0,84,721	1/1:0,10:10:30.08:332,30,0	0/0:28,0:22:24.95:0,25,220	0/0:32,0:23:35.21:0,35,291	1/1:2,25:27:63.13:683,63,0	1/1:4,18:22:34.51:596,35,0	1/1:11,12:23:22.07:471,22,0	1/1:10,9:19:30.08:331,30,0	0/0:12,0:12:32.98:0,33,282	1/1:3,14:17:16.06:403,16,0	1/1:3,14:17:45.04:470,45,0	0/0:20,0:20:50.98:0,51,442	0/0:16,0:16:32.92:0,33,278	0/0:10,0:10:23.99:0,24,208	1/1:5,15:19:39.11:432,39,0	1/1:4,7:12:0.85:220,1,0	1/1:1,20:21:31.10:571,31,0	1/1:4,13:17:19.03:425,19,0	1/1:3,16:19:27.47:513,27,0	1/1:3,8:11:1.02:239,1,0	1/1:5,7:12:21.06:230,21,0	0/0:23,0:23:47.96:0,48,412	0/0:9,0:9:26.99:0,27,234	0/0:22,0:22:50.94:0,51,438	1/1:5,7:12:24.06:265,24,0	1/1:4,17:21:25.07:496,25,0	1/1:2,20:22:57.15:631,57,0	1/1:1,11:12:4.03:273,4,0
chr10	17185177	.	GA	G	2965.09	PASS	AB=0.971;AC=20;AF=0.357;AN=56;BaseQRankSum=1.494;DP=548;FS=0.380;HRun=10;HaplotypeScore=96.2687;InbreedingCoeff=0.8980;MQ=74.95;MQ0=1;MQRankSum=-7.291;QD=14.61;ReadPosRankSum=-1.461;VQSLOD=3.4925;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:96.24:0,96,1053	0/0:14,0:14:36.05:0,36,372	0/0:29,0:19:42.19:0,42,318	0/1:30,2:24:1.35:1,0,128	0/0:29,1:30:46.30:0,46,737	1/1:7,18:25:53.01:448,53,0	1/1:5,14:19:38.98:338,39,0	1/1:4,21:25:62.97:542,63,0	0/0:12,0:12:36.10:0,36,398	0/0:15,1:16:10.07:0,10,339	0/0:17,0:17:39.09:0,39,420	0/0:16,0:16:22.14:0,22,424	0/0:10,0:10:24.06:0,24,264	0/0:14,0:14:36.10:0,36,398	0/0:20,0:20:38.87:0,39,401	1/1:3,10:14:38:315,38,0	0/0:21,0:21:42.09:0,42,453	1/1:6,14:20:43.95:362,44,0	1/1:6,16:22:50.96:440,51,0	1/1:1,12:13:35.98:312,36,0	1/1:2,6:8:21:182,21,0	0/0:17,0:18:47.96:0,48,512	0/1:12,0:12:1.79:2,0,186	0/0:18,0:18:42.11:0,42,465	1/1:4,8:12:26.98:234,27,0	0/0:23,0:23:57.11:0,57,601	0/0:30,0:30:75.02:0,75,810	0/0:20,0:20:51.05:0,51,517
chr10	17187290	.	A	AG	7372.87	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=19.078;DP=730;FS=5.440;HRun=0;HaplotypeScore=128.5503;InbreedingCoeff=0.9949;MQ=83.26;MQ0=0;MQRankSum=-15.529;QD=42.37;ReadPosRankSum=-3.586;VQSLOD=3.0117;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,138,1910	1/1:3,9:12:36.12:551,36,0	0/0:21,0:21:36.51:0,37,674	0/0:26,0:26:72.10:0,72,946	1/1:4,20:24:66.04:945,66,0	0/0:27,0:27:81.27:0,81,1132	0/0:28,0:28:81.22:0,81,1076	0/0:26,0:26:78.25:0,78,1061	0/0:27,0:27:78.24:0,78,1070	1/1:3,18:21:63.16:949,63,0	1/1:2,10:12:30.03:446,30,0	0/0:35,0:35:99:0,105,1466	0/0:33,0:33:96.30:0,96,1321	0/0:39,0:39:99:0,114,1539	1/1:1,28:29:84.29:1329,84,0	0/0:25,0:25:75.21:0,75,996	1/1:4,14:18:44.98:617,45,0	0/0:38,0:38:99:0,114,1568	0/0:25,0:25:75.22:0,75,1012	0/0:14,0:14:33.11:0,33,461	0/0:61,0:61:99:0,175,2415	0/0:19,0:19:51.16:0,51,698	0/0:15,0:15:42.12:0,42,563	0/0:32,0:32:96.30:0,96,1322	0/0:16,0:16:48.12:0,48,647	1/1:5,24:29:87.15:1309,87,0	1/1:1,23:24:69.24:1093,69,0	1/1:1,4:5:11.93:134,12,0
chr10	17187298	.	TCTC	T	6762.06	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=18.027;DP=721;FS=4.075;HRun=0;HaplotypeScore=153.4751;InbreedingCoeff=0.9972;MQ=82.82;MQ0=0;MQRankSum=-17.799;QD=42.53;ReadPosRankSum=-1.219;VQSLOD=6.0341;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,163,3618	1/1:0,10:10:29.13:465,29,0	0/0:20,0:21:63.12:0,63,1280	0/0:26,0:26:69.06:0,69,1406	1/1:4,15:19:33.11:556,33,0	0/0:27,0:27:81.28:0,81,1856	0/0:29,0:29:78.24:0,78,1687	0/0:27,0:27:72.24:0,72,1544	0/0:25,0:25:69.24:0,69,1590	1/1:1,18:19:57.14:938,57,0	1/1:1,11:12:30.10:497,30,0	0/0:39,0:39:99:0,117,2677	0/0:33,0:33:93.32:0,93,2138	0/0:40,0:40:99:0,120,2715	1/1:2,25:27:78.27:1322,78,0	0/0:29,0:29:87.30:0,87,1947	1/1:2,12:14:30.05:465,30,0	0/0:39,0:39:99:0,114,2555	0/0:19,0:19:51.18:0,51,1176	0/0:16,0:16:42.14:0,42,945	0/0:59,0:59:99:0,175,3879	0/0:21,0:21:60.21:0,60,1360	0/0:12,0:12:36.12:0,36,829	0/0:31,0:31:90.31:0,90,2023	0/0:14,0:14:42.14:0,42,968	1/1:5,22:27:72.13:1133,72,0	1/1:4,22:26:72.19:1166,72,0	1/1:1,4:5:15:221,15,0
chr10	17187354	.	CTCAGAG	C	8059.10	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=16.279;DP=774;FS=5.851;HRun=0;HaplotypeScore=201.3575;InbreedingCoeff=0.9771;MQ=81.38;MQ0=0;MQRankSum=-16.163;QD=47.13;ReadPosRankSum=0.984;VQSLOD=4.0793;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:60,0:60:99:0,166,5677	1/1:2,8:10:24.08:572,24,0	0/0:25,0:25:72.21:0,72,2181	0/0:24,0:24:63.17:0,63,1895	1/1:1,15:16:11.78:283,12,0	0/0:27,0:27:81.28:0,81,2848	0/0:34,0:34:99:0,102,3653	0/0:21,0:21:63.21:0,63,2114	0/0:27,0:27:81.26:0,81,2821	1/1:7,24:31:72.23:1681,72,0	1/1:2,10:12:5.97:141,6,0	0/0:38,0:38:99:0,108,3709	0/0:27,0:27:78.25:0,78,2601	0/0:37,0:37:99:0,111,3903	1/1:4,30:34:72.25:1687,72,0	0/0:37,0:37:99:0,111,3859	1/1:1,14:15:21.07:504,21,0	0/0:44,0:44:99:0,132,4488	0/0:23,0:23:66.20:0,66,2058	0/0:17,0:17:45.15:0,45,1621	0/0:64,0:64:99:0,181,6338	0/0:21,0:21:57.18:0,57,1878	0/0:19,0:19:51.17:0,51,1753	0/0:33,0:33:99:0,99,3298	0/0:25,0:25:60.21:0,60,2113	1/1:2,19:21:57.17:1320,57,0	1/1:3,19:22:51.18:1224,51,0	1/1:0,10:10:27.09:648,27,0
chr10	17187841	.	ACTCTCTCT	A	50.14	PASS	AB=0.840;AC=9;AF=0.225;AN=40;BaseQRankSum=1.659;DP=307;FS=6.105;HRun=0;HaplotypeScore=64.3697;InbreedingCoeff=0.1815;MQ=27.97;MQ0=12;MQRankSum=-0.845;QD=0.61;ReadPosRankSum=-0.908;VQSLOD=0.5064;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:12:0:0,0,0	0/0:11,0:10:11.04:0,11,238	./.	./.	0/0:26,0:26:0:0,0,0	0/1:6,0:8:0.01:0,0,0	./.	./.	0/0:7,0:10:0.19:0,0,0	0/0:17,0:15:18.06:0,18,552	0/0:10,0:10:3.48:0,3,88	./.	0/1:4,0:5:14.57:61,0,15	0/1:6,0:6:8.65:10,0,9	0/0:11,0:17:4.50:0,4,21	0/1:13,1:17:19.52:62,0,20	0/0:12,0:11:0.33:0,0,1	./.	0/0:7,0:7:6.02:0,6,222	0/1:10,0:10:0:0,0,0	0/0:10,0:5:3.01:0,3,81	1/1:9,0:9:0.42:1,0,0	0/1:5,2:7:0:1,0,0	./.	0/1:13,2:17:0.12:0,0,0	0/0:17,0:16:24.08:0,24,719	0/0:11,0:11:3.01:0,3,83	./.
chr10	17187958	.	T	TACACAG	5394.21	PASS	AB=0.882;AC=35;AF=0.625;AN=56;BaseQRankSum=-5.091;DP=623;FS=25.443;HRun=0;HaplotypeScore=220.9890;InbreedingCoeff=0.5020;MQ=46.09;MQ0=29;MQRankSum=-1.770;QD=13.25;ReadPosRankSum=1.071;VQSLOD=2.5058;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:17,5:21:21.04:383,21,0	0/0:8,0:8:5.74:0,6,70	0/0:46,0:18:48.01:0,48,715	0/0:41,0:22:46.01:0,46,592	0/0:17,0:17:5.95:0,6,277	1/1:7,9:17:5.99:203,6,0	1/1:9,19:26:10.22:250,10,0	1/1:7,13:24:54.02:1069,54,0	1/1:12,1:12:8.98:148,9,0	0/1:35,0:34:88.60:89,0,790	0/1:26,0:26:8.53:9,0,345	1/1:10,5:13:10.67:248,11,0	1/1:6,3:9:18.06:570,18,0	1/1:6,1:4:5.81:115,6,0	0/0:36,0:35:4.14:0,4,687	1/1:11,11:25:21.54:596,22,0	0/0:34,0:33:81.11:0,81,1269	1/1:7,2:7:9.03:279,9,0	1/1:14,2:11:18.04:401,18,0	1/1:10,6:16:7.49:177,7,0	1/1:12,17:33:6.02:81,6,0	0/1:14,13:25:7.64:97,0,8	1/1:11,12:21:8.07:166,8,0	0/1:7,4:11:0.17:1,0,0	1/1:5,11:17:14.40:442,14,0	0/1:24,0:22:69.91:70,0,513	0/0:21,0:18:32.65:0,33,532	0/0:13,0:13:1.34:0,1,157
chr10	17187966	.	C	CACAG	3067.62	PASS	AB=0.960;AC=24;AF=0.429;AN=56;BaseQRankSum=-1.670;DP=620;FS=38.361;HRun=0;HaplotypeScore=193.6104;InbreedingCoeff=-0.3102;MQ=48.08;MQ0=17;MQRankSum=-2.466;QD=7.27;ReadPosRankSum=5.159;VQSLOD=1.1115;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:18,4:21:99:344,0,113	0/0:7,0:7:5.88:0,6,52	0/0:44,0:25:64.48:0,64,939	0/0:42,0:25:55.30:0,55,794	0/0:16,0:16:2.97:0,3,190	0/1:15,0:15:39.39:96,0,39	0/1:28,1:28:99:177,0,115	0/1:27,0:27:99:414,0,375	0/1:13,0:12:19.57:46,0,20	0/1:37,0:36:99:144,0,618	0/1:24,0:24:6.75:7,0,283	1/1:15,0:13:12:153,12,0	0/1:9,1:10:99:258,0,120	0/1:8,0:5:8.66:58,0,9	0/0:31,0:30:7.12:0,7,479	1/1:22,2:22:21.01:425,21,0	0/0:36,0:35:84.58:0,85,951	0/1:7,0:5:65.53:68,0,66	0/1:8,8:13:13.30:298,0,13	1/1:13,1:14:4.54:105,5,0	0/1:39,1:35:98.47:140,0,98	0/1:29,1:28:41.74:42,0,114	0/1:21,1:20:51.13:141,0,51	0/1:12,0:12:0.36:1,0,0	0/1:18,0:18:88:189,0,88	0/1:28,0:26:71.99:72,0,516	0/0:22,0:19:35.26:0,35,399	0/1:11,0:11:52.95:53,0,114
chr10	17188008	.	TACTC	T	3705.36	PASS	AB=0.586;AC=9;AF=0.161;AN=56;BaseQRankSum=5.341;DP=696;FS=0.000;HRun=0;HaplotypeScore=224.6216;InbreedingCoeff=0.0000;MQ=48.93;MQ0=20;MQRankSum=-3.903;QD=21.42;ReadPosRankSum=-0.923;VQSLOD=3.1065;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:7,19:26:45.81:565,0,46	0/0:4,0:4:8.98:0,9,246	0/0:26,0:15:42.14:0,42,1000	0/0:40,0:22:49.68:0,50,1292	0/0:20,0:19:32.91:0,33,840	0/0:20,0:19:30.08:0,30,804	0/0:31,0:28:63.22:0,63,1677	0/0:58,0:56:99:0,156,3949	0/1:7,16:22:96.54:620,0,97	0/0:28,0:25:69.23:0,69,1791	0/0:13,0:12:17.77:0,18,468	0/1:12,15:21:99:601,0,120	0/1:4,11:12:23.69:530,0,24	0/1:6,14:16:21.69:529,0,22	0/0:34,0:34:81.16:0,81,1957	0/0:35,0:32:45.63:0,46,1171	0/0:34,0:32:77.94:0,78,1987	0/0:17,0:16:39.13:0,39,1053	0/0:16,0:15:39.13:0,39,1025	0/0:18,0:16:34.91:0,35,810	0/0:60,0:54:71.69:0,72,1921	0/1:8,22:29:99:514,0,281	0/1:3,13:16:99:288,0,138	1/1:4,12:13:3.48:59,3,0	0/0:21,0:21:42.08:0,42,1033	0/0:24,0:22:66.23:0,66,1711	0/0:18,0:18:44.74:0,45,1157	0/0:5,0:5:15.05:0,15,387
chr10	17188064	.	TACACAG	T	3426.33	PASS	AB=0.951;AC=44;AF=0.786;AN=56;BaseQRankSum=-1.270;DP=690;FS=21.039;HRun=0;HaplotypeScore=230.3405;InbreedingCoeff=0.1418;MQ=46.34;MQ0=38;MQRankSum=-0.051;QD=5.95;ReadPosRankSum=1.202;VQSLOD=1.2589;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:32,0:32:6.46:49,6,0	1/1:4,0:4:6.46:49,6,0	0/1:38,0:13:0.47:0,0,102	0/1:35,0:14:20.51:21,0,71	1/1:17,0:16:5.88:48,6,0	0/1:8,14:21:8.50:57,0,8	0/0:14,25:37:0.82:0,1,1	0/1:35,0:32:2.08:347,0,2	0/1:33,0:32:6.54:38,0,7	1/1:15,0:12:20.94:179,21,0	1/1:11,0:10:0.47:1,0,0	0/1:28,0:22:18.23:162,0,18	1/1:23,0:20:19.89:252,20,0	1/1:25,0:21:11.61:142,12,0	1/1:21,0:20:24.94:269,25,0	1/1:35,0:32:14.30:220,14,0	1/1:23,0:21:5.95:43,6,0	1/1:24,0:22:28.89:327,29,0	1/1:16,0:13:17.20:184,17,0	0/1:18,0:15:6.19:6,0,48	0/0:75,0:68:7.77:0,8,20	1/1:25,0:22:9.45:75,9,0	1/1:17,0:17:6.78:66,7,0	1/1:21,0:18:3.66:65,4,0	1/1:18,1:19:12.22:116,12,0	1/1:24,0:23:53.78:487,54,0	0/1:10,0:9:0.32:138,0,0	1/1:5,0:5:8.98:86,9,0
chr10	17188074	.	CAG	C	997.14	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=4.473;DP=678;FS=52.161;HRun=0;HaplotypeScore=207.0589;InbreedingCoeff=0.8976;MQ=45.79;MQ0=36;MQRankSum=0.246;QD=8.11;ReadPosRankSum=2.448;VQSLOD=1.0270;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:17.89:0,18,180	1/1:2,2:4:5.96:44,6,0	0/0:33,0:13:33.02:0,33,493	0/0:34,0:14:34:0,34,600	1/1:9,6:14:5.85:48,6,0	0/0:24,0:23:9.77:0,10,167	0/0:36,0:34:21.06:0,21,328	0/0:41,0:37:56.78:0,57,1090	0/0:28,0:27:18.05:0,18,279	1/1:14,0:12:22.28:167,22,0	1/1:7,4:10:5.98:48,6,0	0/0:28,0:22:34.73:0,35,446	0/0:22,0:19:34.49:0,34,445	0/0:27,0:23:25.05:0,25,336	1/1:14,4:18:26.82:213,27,0	0/0:32,0:29:19.27:0,19,265	1/1:20,0:18:5.17:42,5,0	0/0:26,0:24:28.89:0,29,382	0/0:16,0:13:28.16:0,28,413	0/0:16,0:15:23.71:0,24,328	0/0:76,0:68:53.75:0,54,851	0/0:23,0:20:18:0,18,180	0/0:18,0:17:24.50:0,25,293	0/0:21,0:18:11.45:0,11,148	0/0:20,0:20:23.71:0,24,227	1/1:16,5:20:24.09:397,24,0	1/1:8,3:10:20.82:156,21,0	1/1:4,1:5:8.99:80,9,0
chr10	17188080	.	CAGACACAG	C	3504.55	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=1.517;DP=658;FS=21.293;HRun=0;HaplotypeScore=231.3623;InbreedingCoeff=0.2726;MQ=44.56;MQ0=33;MQRankSum=-2.480;QD=9.22;ReadPosRankSum=0.453;VQSLOD=0.8987;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:2.55:0,3,21	1/1:3,1:4:6.49:97,6,0	0/0:25,0:10:16.26:0,16,295	0/1:28,0:12:0.12:0,0,229	1/1:8,6:13:5.91:95,6,0	0/0:23,0:23:12.16:0,12,286	0/0:38,0:38:22.91:0,23,327	0/1:43,0:40:99:216,0,160	0/0:28,0:27:8.88:0,9,47	1/1:14,0:12:28.87:414,29,0	1/1:6,2:8:0.45:1,0,0	0/1:25,0:20:93.82:122,0,94	0/1:23,0:20:66.82:131,0,67	0/1:26,0:22:62.83:88,0,63	1/1:16,3:17:24.55:477,25,0	0/0:27,0:24:25.52:0,26,253	1/1:23,0:21:13.17:154,13,0	0/1:24,0:23:39.31:39,0,172	0/0:15,0:11:15.55:0,16,164	0/0:16,0:15:9.49:0,9,258	0/0:74,0:67:15.64:0,16,443	1/1:23,0:20:8.20:92,8,0	0/1:15,0:14:10.72:38,0,11	0/1:23,0:19:20.99:42,0,21	0/1:22,0:22:84.05:84,0,165	1/1:21,4:24:64.70:968,65,0	1/1:12,3:13:13.60:282,14,0	1/1:4,1:5:9.03:165,9,0
chr10	17188084	.	CACAG	C	4667.62	PASS	AB=0.951;AC=47;AF=0.839;AN=56;BaseQRankSum=-0.250;DP=637;FS=34.130;HRun=0;HaplotypeScore=206.3616;InbreedingCoeff=0.1319;MQ=44.61;MQ0=26;MQRankSum=0.471;QD=7.77;ReadPosRankSum=5.281;VQSLOD=2.2758;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:31,0:31:5.98:48,6,0	1/1:4,0:4:5.99:48,6,0	0/1:22,0:10:0.47:0,0,102	0/1:23,0:10:20.50:20,0,71	1/1:14,0:13:5.98:48,6,0	0/1:21,1:22:27.55:28,0,61	0/0:36,0:36:1.43:0,1,67	1/1:42,0:39:70:575,70,0	1/1:26,0:25:16.57:114,17,0	1/1:14,0:12:22.45:170,22,0	0/1:8,0:7:0:0,0,0	1/1:22,0:19:22.37:217,22,0	1/1:21,1:20:32.49:291,32,0	1/1:22,0:19:15:158,15,0	1/1:20,0:18:23.99:223,24,0	0/1:26,0:24:16.19:307,0,16	1/1:25,0:23:9.83:110,10,0	0/1:17,4:20:3.95:366,0,4	1/1:16,0:12:29.91:331,30,0	1/1:17,0:16:23.03:225,23,0	1/1:70,0:64:26.87:259,27,0	1/1:23,0:20:8.66:91,9,0	1/1:16,0:15:14.35:104,14,0	1/1:22,0:19:8.97:86,9,0	0/1:24,3:27:7.47:133,0,7	1/1:24,0:23:46.01:489,46,0	1/1:16,0:14:14.35:151,14,0	1/1:5,0:5:8.97:73,9,0
chr10	17188086	.	CAG	C	4180.91	PASS	AB=0.907;AC=48;AF=0.857;AN=56;BaseQRankSum=-0.339;DP=625;FS=27.463;HRun=0;HaplotypeScore=195.1705;InbreedingCoeff=0.1319;MQ=42.61;MQ0=23;MQRankSum=0.687;QD=6.69;ReadPosRankSum=3.613;VQSLOD=1.2553;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:29,2:31:5.97:48,6,0	1/1:4,0:4:5.97:48,6,0	0/1:21,0:9:0.44:0,0,102	0/1:21,0:8:20.66:21,0,71	1/1:13,0:13:5.85:48,6,0	0/1:21,2:23:1:1,0,220	0/1:35,1:36:1.09:1,0,207	1/1:7,35:39:95.08:841,95,0	1/1:22,2:24:8.02:69,8,0	1/1:14,0:12:21.41:158,21,0	0/1:7,0:7:0:0,0,0	1/1:21,1:19:17.73:159,18,0	1/1:18,3:19:28.65:223,29,0	1/1:16,3:17:12.84:99,13,0	1/1:21,0:19:23.83:189,24,0	0/1:5,19:22:75.16:200,0,75	1/1:24,1:24:2.37:76,2,0	0/1:18,3:21:94.86:226,0,95	1/1:14,2:12:25.71:238,26,0	1/1:14,3:16:26.40:235,26,0	1/1:13,56:63:26.87:318,27,0	1/1:21,2:20:8.63:70,9,0	1/1:13,2:14:8.12:66,8,0	1/1:19,3:19:5.97:46,6,0	0/1:25,2:27:64.67:111,0,65	1/1:24,0:24:66.16:477,66,0	1/1:17,0:15:19.04:135,19,0	1/1:6,0:6:8.97:76,9,0
chr10	17188103	.	A	ACG	912.23	PASS	AB=0.936;AC=12;AF=0.222;AN=54;BaseQRankSum=-6.523;DP=544;FS=20.912;HRun=0;HaplotypeScore=188.4670;InbreedingCoeff=-0.0888;MQ=41.65;MQ0=22;MQRankSum=0.740;QD=3.13;ReadPosRankSum=-1.171;VQSLOD=0.9830;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:24:0.02:0,0,0	0/0:3,0:3:0:0,0,0	./.	0/0:9,0:3:2.88:0,3,15	1/1:13,0:13:2.50:11,3,0	0/1:23,0:23:3.76:4,0,60	0/1:33,0:33:74.41:74,0,78	0/1:38,0:36:99:259,0,119	0/0:20,0:19:17.89:0,18,159	0/0:13,0:10:13.76:0,14,102	0/0:11,0:10:0:0,0,0	0/0:21,0:18:10.89:0,11,153	0/0:21,0:19:26.92:0,27,238	0/0:18,0:16:12.02:0,12,129	0/0:23,0:21:18.99:0,19,127	0/1:24,0:23:26.18:26,0,184	0/1:22,0:21:19.27:19,0,52	0/1:19,0:19:7:7,0,176	0/1:15,7:16:92.33:173,0,92	0/1:8,7:16:99:196,0,103	0/1:52,4:53:54.43:270,0,54	0/0:16,0:14:2.55:0,3,24	0/0:11,0:10:9.01:0,9,103	0/0:16,0:13:6.02:0,6,74	0/0:22,0:22:7.50:0,7,114	0/0:24,0:24:32.89:0,33,316	0/0:14,0:12:5.22:0,5,53	0/0:7,0:7:3.01:0,3,31
chr10	17188109	.	ACACACACGCGCG	A	2088.37	PASS	AB=0.965;AC=27;AF=0.482;AN=56;BaseQRankSum=8.158;DP=497;FS=4.791;HRun=0;HaplotypeScore=200.6078;InbreedingCoeff=0.2786;MQ=44.71;MQ0=18;MQRankSum=-4.736;QD=8.74;ReadPosRankSum=2.038;VQSLOD=2.5846;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:23,1:23:0.47:1,0,0	0/1:3,0:3:0:0,0,0	1/1:2,0:1:2.50:9,2,0	0/1:5,0:3:10.04:10,0,36	0/1:13,0:13:0.11:0,0,0	0/0:22,0:22:26.72:0,27,692	0/0:35,0:35:28.01:0,28,787	0/0:36,0:35:63.01:0,63,531	0/1:16,0:15:12.49:12,0,80	1/1:10,0:7:11.50:134,12,0	1/1:9,0:8:0.47:1,0,0	0/1:21,1:19:92.48:227,0,92	0/1:17,2:17:35.58:291,0,36	1/1:15,2:15:4.26:175,4,0	1/1:17,0:15:21.52:489,22,0	0/0:23,0:22:21.21:0,21,463	1/1:19,0:18:6.75:51,7,0	0/0:20,0:20:24.37:0,24,772	0/0:22,0:16:16.07:0,16,375	0/0:15,0:15:23.58:0,24,499	0/0:52,0:49:51.09:0,51,748	1/1:14,0:12:1.82:5,2,0	0/0:8,2:9:5.92:0,6,45	0/1:11,3:11:20.14:81,0,20	0/0:23,0:23:19.11:0,19,287	0/1:17,0:17:7.55:569,0,8	0/1:13,0:11:58.81:168,0,59	1/1:5,0:5:3:26,3,0
chr10	17188113	.	ACACGCGCG	A	2209.52	PASS	AB=0.931;AC=28;AF=0.500;AN=56;BaseQRankSum=6.246;DP=479;FS=0.000;HRun=0;HaplotypeScore=177.8747;InbreedingCoeff=-0.0972;MQ=44.67;MQ0=15;MQRankSum=-3.784;QD=5.88;ReadPosRankSum=-0.358;VQSLOD=2.5318;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:20,3:22:0.02:1,0,0	1/1:3,0:3:0.47:1,0,0	0/0:1,0:1:1.82:0,2,5	0/1:6,0:3:5.19:5,0,36	0/1:12,1:13:0.11:0,0,0	0/0:21,0:23:25:0,25,510	0/0:32,0:32:27.71:0,28,659	0/1:36,0:35:78.60:91,0,79	0/1:12,2:13:46.77:60,0,47	1/1:10,0:7:3.80:130,4,0	0/1:9,0:8:0.07:0,0,0	0/1:17,2:16:37.55:202,0,38	0/1:14,3:15:3.31:237,0,3	0/1:12,3:13:8.15:133,0,8	1/1:17,0:15:21.07:470,21,0	0/1:21,0:21:44.99:45,0,329	1/1:20,0:19:6.08:59,6,0	0/1:18,0:20:23.80:24,0,456	0/1:22,0:17:2.33:2,0,189	0/0:16,0:16:0.24:0,0,166	0/1:48,0:46:42.63:43,0,376	1/1:9,2:11:0.77:2,1,0	0/0:7,3:9:5.96:0,6,45	0/1:13,1:11:15.05:63,0,15	0/0:20,0:20:4.38:0,4,176	0/1:18,0:18:2.94:631,0,3	0/1:11,2:11:12.27:135,0,12	1/1:5,0:5:2.88:15,3,0
chr10	17188115	.	ACGCGCG	A	1891.54	PASS	AB=0.905;AC=26;AF=0.565;AN=46;BaseQRankSum=7.732;DP=466;FS=10.006;HRun=0;HaplotypeScore=170.1444;InbreedingCoeff=0.4375;MQ=44.77;MQ0=13;MQRankSum=-5.557;QD=7.28;ReadPosRankSum=1.996;VQSLOD=2.2117;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:17,4:20:0:0,0,0	./.	0/0:2,0:1:3:0,3,26	0/1:6,0:3:5.19:5,0,36	0/1:4,7:13:0.11:0,0,0	0/0:21,0:21:0.60:0,1,325	0/0:32,0:33:33.72:0,34,568	0/0:32,0:31:10.27:0,10,64	1/1:12,1:13:3.01:40,3,0	1/1:3,5:7:8.99:138,9,0	./.	1/1:14,4:16:12.04:178,12,0	1/1:15,1:14:12.04:199,12,0	1/1:12,2:13:6.02:104,6,0	1/1:10,5:15:21.07:430,21,0	0/1:20,0:19:5.04:5,0,229	1/1:8,0:19:8.05:103,8,0	0/1:20,0:20:13.03:13,0,304	0/1:26,0:20:9.40:9,0,213	0/0:14,0:15:14.84:0,15,125	0/0:46,0:44:38.87:0,39,385	./.	./.	1/1:12,1:11:3.35:50,3,0	0/0:18,0:20:15.74:0,16,134	1/1:5,11:18:36.07:642,36,0	1/1:6,2:11:5.97:129,6,0	./.
chr10	17188177	.	GGCT	G	7561.64	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=4.458;DP=612;FS=3.038;HRun=0;HaplotypeScore=132.8448;InbreedingCoeff=0.9629;MQ=51.93;MQ0=1;MQRankSum=-7.365;QD=45.83;ReadPosRankSum=2.319;VQSLOD=6.4535;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,31:32:87.30:1515,87,0	0/0:11,0:11:27.09:0,27,636	0/0:27,0:22:66.23:0,66,1447	0/0:31,0:27:75.25:0,75,1633	0/0:23,0:23:57.20:0,57,1346	0/0:16,0:16:48.16:0,48,1134	0/0:23,0:23:66.19:0,66,1508	0/0:37,0:36:99:0,105,2405	1/1:0,18:18:54.19:952,54,0	0/0:30,0:29:87.30:0,87,2056	0/0:13,0:13:33.11:0,33,780	1/1:1,21:22:63.22:1110,63,0	1/1:0,21:21:63.22:1110,63,0	1/1:1,24:23:60.21:1058,60,0	0/0:35,0:35:99:0,99,2329	0/0:17,1:18:1.32:0,1,1142	0/0:30,0:30:68.77:0,69,1630	0/0:23,0:23:63.22:0,63,1487	0/0:19,0:19:57.19:0,57,1301	0/0:16,0:16:42.14:0,42,989	0/0:27,0:27:72.25:0,72,1702	1/1:1,20:21:45.15:793,45,0	1/1:0,11:11:27.09:475,27,0	1/1:2,13:15:32.94:548,33,0	0/0:19,0:19:51.18:0,51,1196	0/0:23,0:23:69.24:0,69,1599	0/0:12,0:12:33.11:0,33,780	0/0:14,0:14:33.11:0,33,780
chr10	17188477	.	A	AT	16067.71	PASS	AB=0.583;AC=51;AF=0.911;AN=56;BaseQRankSum=-5.045;DP=624;FS=7.890;HRun=9;HaplotypeScore=61.0355;InbreedingCoeff=0.7717;MQ=71.19;MQ0=0;MQRankSum=-3.829;QD=26.78;ReadPosRankSum=2.145;VQSLOD=5.2832;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,43:47:99:1276,118,0	1/1:0,15:15:42.11:465,42,0	0/0:9,0:8:8.99:0,9,78	0/0:14,0:14:17.19:0,17,133	1/1:5,26:31:49.11:757,49,0	1/1:2,17:19:54.14:590,54,0	1/1:1,15:16:45.12:498,45,0	1/1:7,33:40:99:1095,99,0	1/1:4,14:18:39.11:431,39,0	1/1:2,22:24:63.16:689,63,0	1/1:5,14:19:39.06:411,39,0	1/1:3,19:22:57.15:629,57,0	1/1:1,21:22:57.15:625,57,0	1/1:4,25:30:84.04:895,84,0	1/1:4,24:28:66.17:725,66,0	1/1:1,27:28:78.21:863,78,0	1/1:2,20:23:53.98:578,54,0	1/1:2,16:18:48.13:531,48,0	1/1:5,16:21:51.05:528,51,0	1/1:2,15:17:39.11:431,39,0	1/1:0,6:6:14.91:148,15,0	1/1:3,13:17:32.88:332,33,0	1/1:0,20:20:48.13:530,48,0	0/1:6,15:21:6.73:386,0,7	1/1:4,18:22:54.15:597,54,0	1/1:4,27:31:52.14:795,52,0	1/1:1,24:25:60.16:664,60,0	1/1:1,19:20:54.15:597,54,0
chr10	17191289	.	CTTT	C	4151.21	PASS	AB=0.583;AC=21;AF=0.375;AN=56;BaseQRankSum=-10.716;DP=463;FS=20.691;HRun=14;HaplotypeScore=94.0127;InbreedingCoeff=0.7625;MQ=63.76;MQ0=2;MQRankSum=1.220;QD=18.96;ReadPosRankSum=2.022;VQSLOD=0.8519;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:43:44.61:0,45,134	0/0:3,0:9:19.16:0,19,139	0/0:10,0:8:11.98:0,12,157	0/0:13,0:13:32.68:0,33,308	0/0:6,0:18:43.09:0,43,369	1/1:1,17:22:58.52:647,59,0	1/1:2,12:17:41.86:437,42,0	1/1:7,16:24:51:576,51,0	0/0:9,0:10:21.05:0,21,333	0/0:8,1:20:9.82:0,10,325	0/0:3,0:6:17.96:0,18,159	0/0:1,0:12:11.21:0,11,24	0/1:4,1:14:17.34:17,0,67	0/1:4,0:15:0.37:0,0,33	0/0:4,0:12:26.43:0,26,205	1/1:3,12:15:30.07:351,30,0	0/0:15,0:23:46.48:0,46,442	1/1:5,15:20:39.68:487,40,0	1/1:4,13:18:37.55:452,38,0	1/1:6,5:11:17.57:205,18,0	1/1:7,13:22:37.44:431,37,0	0/0:4,0:13:11.21:0,11,24	0/0:6,0:13:14.04:0,14,44	0/1:6,1:19:9.98:32,0,10	1/1:5,16:21:45.07:516,45,0	0/0:6,0:17:35.90:0,36,296	0/0:8,0:21:55.11:0,55,480	0/0:0,0:2:2.99:0,3,23
chr10	17191315	.	C	CT	3915.83	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=-6.036;DP=469;FS=13.584;HRun=7;HaplotypeScore=82.1557;InbreedingCoeff=0.8798;MQ=73.78;MQ0=2;MQRankSum=-3.661;QD=25.76;ReadPosRankSum=-1.806;VQSLOD=2.3017;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,99,950	1/1:1,9:10:27.08:325,27,0	0/0:18,0:17:19.76:0,20,280	0/1:13,0:13:17.90:18,0,170	1/1:2,13:15:39.11:461,39,0	0/0:25,0:25:72.11:0,72,695	0/0:17,0:17:45.07:0,45,434	0/0:21,0:21:42.06:0,42,405	0/0:7,0:7:18.03:0,18,174	1/1:3,12:15:36:414,36,0	1/1:3,8:11:24.03:274,24,0	0/0:20,0:20:56.98:0,57,527	0/0:14,0:14:33.05:0,33,318	0/0:18,0:18:48.07:0,48,462	1/1:3,8:11:1.10:286,1,0	0/0:17,0:17:45.02:0,45,434	1/1:5,15:20:54.10:614,54,0	0/0:19,0:19:48.05:0,48,457	0/0:17,0:17:45.07:0,45,433	0/0:9,0:9:24.04:0,24,232	0/0:12,0:12:30.04:0,30,290	0/0:13,0:12:30.04:0,30,289	0/0:14,0:14:39.05:0,39,371	0/0:16,0:16:39.06:0,39,376	0/0:18,0:18:42.06:0,42,405	1/1:9,17:26:54.16:640,54,0	1/1:2,21:23:60.17:713,60,0	1/1:1,5:6:15.04:171,15,0
chr10	17194908	.	ATTT	A	3485.07	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-12.751;DP=583;FS=0.891;HRun=11;HaplotypeScore=149.9135;InbreedingCoeff=0.9314;MQ=70.10;MQ0=3;MQRankSum=1.488;QD=30.04;ReadPosRankSum=5.178;VQSLOD=1.4912;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:20:30.10:0,30,463	0/0:14,0:14:39.12:0,39,626	0/0:20,0:12:15.03:0,15,210	0/0:9,0:9:0:0,0,0	0/0:36,0:37:96.31:0,96,1564	1/1:1,22:23:57.18:749,57,0	1/1:4,14:18:36.10:472,36,0	0/0:36,0:36:93.32:0,93,1752	0/0:11,0:12:21.05:0,21,387	0/0:20,0:20:57.19:0,57,961	0/0:19,0:19:54:0,54,913	0/0:9,0:15:24.04:0,24,321	0/0:4,0:13:30.10:0,30,458	0/0:5,0:19:36.12:0,36,533	0/0:23,0:23:66.12:0,66,1149	1/1:3,24:26:5.58:767,6,0	0/0:24,0:25:75.26:0,75,1331	1/1:1,13:14:27.08:355,27,0	0/0:17,0:16:36.12:0,36,657	0/0:19,0:19:54.19:0,54,1040	0/0:11,0:11:30.10:0,30,518	0/0:5,0:14:36.12:0,36,535	0/0:5,0:19:45.10:0,45,608	0/0:1,0:15:36.12:0,36,541	1/1:1,33:34:87.27:1143,87,0	0/0:35,0:35:99:0,102,1725	0/0:27,0:28:72.23:0,72,1243	0/0:26,0:26:69.24:0,69,1243
chr10	17204950	.	TTCGTTCTCAGCTC	T	8103.63	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=12.918;DP=745;FS=2.160;HRun=0;HaplotypeScore=267.5329;InbreedingCoeff=0.9952;MQ=82.48;MQ0=1;MQRankSum=-13.400;QD=81.04;ReadPosRankSum=2.727;VQSLOD=4.1495;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:58:99:0,172,10613	0/0:13,0:13:39.13:0,39,2572	0/0:21,0:21:60.18:0,60,2877	0/0:25,0:25:67.10:0,67,3829	0/0:14,0:14:36.12:0,36,2260	1/1:1,12:13:30.10:1210,30,0	1/1:6,24:30:63.22:2540,63,0	0/0:23,0:23:66.18:0,66,3968	0/0:26,0:26:75.26:0,75,4837	0/0:22,0:22:66.23:0,66,4254	0/0:17,0:17:51.18:0,51,3355	0/0:39,0:39:99:0,117,7294	0/0:48,0:48:99:0,141,8943	0/0:20,0:20:60.14:0,60,3558	0/0:28,0:28:81.28:0,81,5250	1/1:4,18:22:42.14:1691,42,0	0/0:46,0:46:99:0,126,7504	1/1:5,10:14:21.07:847,21,0	0/0:17,0:17:48.16:0,48,2318	0/0:14,0:14:42.14:0,42,2693	0/0:60,0:60:99:0,178,11268	0/0:16,0:16:48.16:0,48,2824	0/0:16,0:16:48.16:0,48,3174	0/0:52,0:52:99:0,150,9067	1/1:4,16:20:45.15:1815,45,0	0/0:33,0:33:99:0,99,6007	0/0:30,0:30:84.29:0,84,5139	0/0:7,0:7:15.05:0,15,892
chr10	17206753	.	G	GC	5169.89	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-15.540;DP=697;FS=0.000;HRun=3;HaplotypeScore=67.4500;InbreedingCoeff=0.9999;MQ=79.10;MQ0=0;MQRankSum=-2.067;QD=35.65;ReadPosRankSum=0.865;VQSLOD=5.3362;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:93.28:0,93,1115	0/0:13,0:13:39.12:0,39,467	0/0:17,0:17:39.10:0,39,448	0/0:19,0:19:43.33:0,43,471	0/0:25,0:25:57.16:0,57,672	1/1:1,23:24:63.21:881,63,0	1/1:2,22:24:62.88:851,63,0	0/0:29,0:29:78.23:0,78,927	0/0:22,0:22:63.18:0,63,743	0/0:22,0:22:57.17:0,57,684	0/0:17,0:17:45.14:0,45,538	0/0:40,0:40:99:0,105,1248	0/0:24,0:24:69.20:0,69,816	0/0:29,0:29:78.24:0,78,935	0/0:28,0:28:81.25:0,81,972	1/1:0,30:30:78.26:1090,78,0	0/0:43,0:43:99:0,123,1476	1/1:1,43:44:99:1550,111,0	0/0:13,0:13:36.11:0,36,432	0/0:17,0:17:42.12:0,42,492	0/0:34,0:34:87.26:0,87,1044	0/0:16,0:16:42.12:0,42,490	0/0:18,0:18:51.16:0,51,610	0/0:25,0:25:69.17:0,69,812	1/1:0,23:23:57.19:798,57,0	0/0:35,0:35:90.27:0,90,1080	0/0:16,0:16:48.15:0,48,573	0/0:17,0:17:51.16:0,51,611
chr10	17207793	.	A	AG	5007.02	PASS	AB=0.800;AC=11;AF=0.196;AN=56;BaseQRankSum=-14.652;DP=717;FS=3.276;HRun=1;HaplotypeScore=66.9805;InbreedingCoeff=0.8859;MQ=80.19;MQ0=0;MQRankSum=-2.365;QD=35.01;ReadPosRankSum=1.460;VQSLOD=4.8898;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,147,1907	0/1:12,4:16:99:132,0,415	0/0:22,0:22:59.88:0,60,730	0/0:19,0:19:47.53:0,48,560	0/0:11,0:11:33.11:0,33,428	1/1:0,20:20:57.19:854,57,0	1/1:2,36:38:93.32:1394,93,0	0/0:27,0:27:75.24:0,75,962	0/0:31,0:31:87.28:0,87,1130	0/0:23,0:23:66.21:0,66,857	0/0:12,0:12:36.12:0,36,467	0/0:30,0:30:87.28:0,87,1129	0/0:22,0:22:66.21:0,66,857	0/0:31,0:31:93.30:0,93,1201	0/0:33,0:33:99:0,99,1271	1/1:2,21:23:37.43:874,37,0	0/0:39,0:39:99:0,111,1440	1/1:0,30:30:75.25:1124,75,0	0/0:39,0:39:99:0,111,1441	0/0:20,0:20:54.17:0,54,697	0/0:52,0:52:99:0,150,1945	0/0:24,0:24:69.22:0,69,896	0/0:13,0:13:36.12:0,36,464	0/0:31,0:31:87.28:0,87,1130	1/1:2,14:16:42.14:629,42,0	0/0:21,0:21:63.19:0,63,795	0/0:17,0:17:51.15:0,51,646	0/0:7,0:7:21.07:0,21,273
chr10	17208351	.	T	TA	1073.71	PASS	AB=1.000;AC=18;AF=0.333;AN=54;BaseQRankSum=6.636;DP=248;FS=1.856;HRun=7;HaplotypeScore=40.4921;InbreedingCoeff=0.3968;MQ=70.11;MQ0=1;MQRankSum=-1.691;QD=9.76;ReadPosRankSum=4.131;VQSLOD=0.3762;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:54.08:0,54,521	0/1:7,0:7:14.64:15,0,16	0/0:5,0:5:6.01:0,6,58	./.	0/0:12,0:12:3.89:0,4,146	1/1:4,11:15:36.10:420,36,0	1/1:1,3:4:6.02:72,6,0	0/0:32,0:32:72.09:0,72,688	0/0:7,0:7:15:0,15,139	0/1:4,0:4:3.99:4,0,22	0/1:4,0:4:0.94:1,0,23	0/0:8,0:8:15.02:0,15,145	0/0:3,0:3:6.01:0,6,58	0/0:8,0:8:24.03:0,24,228	0/1:8,0:8:4.04:4,0,46	1/1:4,4:8:9.03:108,9,0	1/1:18,0:18:2.55:49,3,0	1/1:1,9:10:14.01:276,14,0	0/0:17,0:16:45.06:0,45,430	0/0:5,0:5:15.02:0,15,145	0/0:4,0:4:9.01:0,9,87	0/0:1,0:1:3:0,3,29	0/0:6,0:6:8.96:0,9,77	0/0:2,0:2:3:0,3,29	1/1:1,10:11:15.74:278,16,0	0/1:7,0:7:4.78:5,0,21	0/1:14,0:14:6.16:6,0,113	0/0:5,0:5:3.38:0,3,78
chr10	17208356	.	A	AAATT	3758.48	PASS	AC=28;AF=0.519;AN=54;BaseQRankSum=-0.426;DP=233;FS=0.640;HRun=0;HaplotypeScore=49.1182;InbreedingCoeff=0.7395;MQ=66.14;MQ0=1;MQRankSum=-0.534;QD=31.06;ReadPosRankSum=1.955;VQSLOD=3.2785;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:48.16:0,48,769	1/1:1,6:7:15.05:363,15,0	0/0:3,0:3:2.46:0,2,12	./.	1/1:5,5:10:15.05:332,15,0	1/1:16,0:16:27.09:399,27,0	1/1:4,0:4:3.01:37,3,0	0/0:28,0:28:48.15:0,48,725	0/0:7,0:7:12.04:0,12,186	1/1:1,3:4:6.02:145,6,0	1/1:2,2:4:9.03:172,9,0	0/0:6,0:6:15.05:0,15,243	0/0:3,0:3:3.01:0,3,45	0/0:9,0:9:18.03:0,18,244	1/1:2,5:7:8.98:217,9,0	1/1:6,0:6:6.02:84,6,0	1/1:1,16:17:42.14:1015,42,0	1/1:9,0:9:9.03:116,9,0	0/0:17,0:16:33.10:0,33,509	0/0:6,0:6:15.05:0,15,238	0/0:4,0:4:9.03:0,9,141	0/0:1,0:1:3.01:0,3,49	0/0:3,0:3:3.01:0,3,49	0/0:2,0:2:3.01:0,3,49	1/1:14,0:14:14.87:156,15,0	1/1:4,2:6:6.02:145,6,0	1/1:5,7:12:18.06:435,18,0	1/1:5,0:5:6.02:143,6,0
chr10	17208378	.	A	ATGAATTAATTAT	4027.79	PASS	AB=0.889;AC=9;AF=0.161;AN=56;BaseQRankSum=2.650;DP=291;FS=2.912;HRun=0;HaplotypeScore=109.7487;InbreedingCoeff=0.7068;MQ=63.01;MQ0=1;MQRankSum=-6.931;QD=73.23;ReadPosRankSum=0.254;VQSLOD=3.5351;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:57.16:0,57,1953	0/0:7,0:7:18.02:0,18,188	0/0:6,0:6:11.12:0,11,89	0/0:7,0:7:2.18:0,2,57	0/0:8,0:8:0.09:0,0,212	1/1:13,4:17:51.09:1715,51,0	1/1:3,0:3:8.94:182,9,0	0/0:28,0:28:84.25:0,84,2183	0/0:12,0:12:33.03:0,33,665	0/0:4,0:4:9.01:0,9,92	0/0:6,0:6:17.96:0,18,162	0/0:11,0:11:33.06:0,33,767	0/0:4,0:4:12.03:0,12,221	0/0:17,0:17:48.06:0,48,933	0/0:12,0:12:29.27:0,29,427	0/1:7,1:8:9:308,0,9	0/0:21,0:21:54.13:0,54,635	1/1:8,2:10:27.02:731,27,0	0/0:18,0:17:51.14:0,51,1317	0/0:8,0:8:21.06:0,21,641	0/0:8,0:8:18.05:0,18,474	0/0:4,0:4:12.01:0,12,249	0/0:5,0:5:15.01:0,15,221	0/0:6,0:6:15.02:0,15,248	1/1:14,3:17:45.10:1092,45,0	0/0:9,0:9:24.05:0,24,312	0/0:14,0:14:30.05:0,30,307	0/0:2,0:2:5.98:0,6,45
chr10	17208509	.	C	CA	2704.96	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=9.729;DP=520;FS=1.098;HRun=0;HaplotypeScore=55.6094;InbreedingCoeff=0.9900;MQ=56.83;MQ0=4;MQRankSum=-1.601;QD=34.24;ReadPosRankSum=1.962;VQSLOD=3.2666;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:90.08:0,90,1199	0/0:8,0:8:21.07:0,21,291	0/0:15,0:8:15.05:0,15,194	0/0:21,0:16:43.59:0,44,566	0/0:10,0:10:30.10:0,30,412	1/1:2,16:15:39.08:593,39,0	1/1:1,12:13:24.08:372,24,0	0/0:36,0:36:99:0,102,1352	0/0:21,0:21:63.15:0,63,839	0/0:7,0:7:18.03:0,18,230	0/0:12,0:12:36.01:0,36,476	0/0:28,0:28:81.23:0,81,1102	0/0:11,0:11:33.10:0,33,444	0/0:17,0:17:51.17:0,51,711	0/0:19,0:19:57.18:0,57,778	1/1:0,14:14:39.13:622,39,0	0/0:41,0:41:99:0,123,1684	1/1:2,18:19:54.18:861,54,0	0/0:17,0:14:32.78:0,33,422	0/0:7,0:7:18.06:0,18,247	0/0:34,0:34:93.28:0,93,1264	0/0:10,0:10:30.10:0,30,419	0/0:8,0:8:24.04:0,24,311	0/0:40,0:40:99:0,114,1592	1/1:0,14:11:27.09:431,27,0	0/0:14,0:14:42.14:0,42,586	0/0:20,0:20:60.20:0,60,833	0/0:15,0:15:42.14:0,42,586
chr10	17208593	.	G	GGGGTA	6421.39	PASS	AB=0.512;AC=9;AF=0.161;AN=56;BaseQRankSum=-2.561;DP=610;FS=23.847;HRun=0;HaplotypeScore=107.3607;InbreedingCoeff=0.8269;MQ=88.25;MQ0=0;MQRankSum=-9.892;QD=72.15;ReadPosRankSum=0.463;VQSLOD=3.9591;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:99:0,99,2253	0/0:8,0:8:24.04:0,24,508	0/0:21,0:21:60.18:0,60,1288	0/0:32,0:32:84.25:0,84,1799	0/0:8,0:8:24.07:0,24,485	1/1:2,13:15:42.13:1251,42,0	1/1:1,8:18:30.10:953,30,0	0/0:22,0:22:60.14:0,60,1159	0/0:30,0:30:87.30:0,87,2024	0/0:16,0:16:48.15:0,48,978	0/0:8,0:8:21.02:0,21,352	0/0:42,0:42:99:0,126,2799	0/0:20,0:20:60.17:0,60,1283	0/0:39,0:39:99:0,114,2586	0/0:35,0:35:99:0,102,2328	0/1:1,17:22:12.68:1732,0,13	0/0:37,0:37:99:0,111,2482	1/1:0,17:19:42.14:1397,42,0	0/0:25,0:25:72.20:0,72,1431	0/0:6,0:6:18.05:0,18,374	0/0:66,0:66:99:0,193,4282	0/0:7,0:7:17.96:0,18,415	0/0:1,0:1:3.01:0,3,70	0/0:31,0:31:90.29:0,90,1971	1/1:3,7:12:36.12:1089,36,0	0/0:12,0:12:33.11:0,33,768	0/0:17,0:17:48.16:0,48,1094	0/0:5,0:5:15.05:0,15,349
chr10	17211091	.	A	ACTTAG	24589.89	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-12.389;DP=639;FS=4.478;HRun=0;HaplotypeScore=112.0633;InbreedingCoeff=0.9978;MQ=78.38;MQ0=0;MQRankSum=-8.484;QD=74.97;ReadPosRankSum=2.676;VQSLOD=6.3889;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:81.28:0,81,1651	1/1:1,16:18:39.13:1176,39,0	0/0:14,0:14:36.12:0,36,697	0/0:21,0:21:51.09:0,51,928	1/1:2,30:33:87.30:2347,87,0	1/1:4,14:19:51.18:1532,51,0	1/1:7,16:23:63.21:1554,63,0	0/0:36,0:36:99:0,105,2181	0/0:24,0:24:66.23:0,66,1388	1/1:10,31:42:99:3771,123,0	1/1:3,16:20:51.17:1411,51,0	0/0:26,0:26:78.27:0,78,1653	0/0:16,0:16:45.15:0,45,949	0/0:20,0:20:60.21:0,60,1248	1/1:1,25:26:72.25:2149,72,0	1/1:2,20:23:57.20:1733,57,0	1/1:6,22:29:66.23:2001,66,0	1/1:6,8:15:39.08:932,39,0	0/0:22,0:22:63.21:0,63,1227	0/0:25,0:25:72.25:0,72,1530	0/0:24,0:24:63.21:0,63,1309	0/0:15,0:15:42.13:0,42,856	0/0:23,0:23:60.21:0,60,1243	0/0:16,0:16:45.15:0,45,958	1/1:2,21:23:66.23:1858,66,0	1/1:1,16:17:51.18:1592,51,0	1/1:7,25:35:66.23:2065,66,0	1/1:0,5:5:15.05:469,15,0
chr10	17211593	.	G	GT	7104.40	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-3.702;DP=578;FS=0.755;HRun=9;HaplotypeScore=68.2255;InbreedingCoeff=0.9919;MQ=70.51;MQ0=5;MQRankSum=0.658;QD=19.15;ReadPosRankSum=-0.327;VQSLOD=4.9143;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:36:92.81:0,93,807	1/1:1,7:8:12.03:133,12,0	0/0:19,0:13:17.46:0,17,124	0/0:25,0:15:20.90:0,21,168	1/1:7,13:19:38.97:383,39,0	1/1:15,0:15:32.14:131,32,0	1/1:23,0:22:40.18:165,40,0	1/1:7,24:31:69.59:732,70,0	0/0:23,1:24:38.75:0,39,552	1/1:5,16:21:42.11:463,42,0	1/1:3,12:16:35.93:379,36,0	0/0:23,0:22:62.97:0,63,543	0/0:15,0:15:38.99:0,39,338	0/0:12,0:12:32.84:0,33,269	1/1:0,17:17:42.11:465,42,0	1/1:15,0:15:21.43:88,21,0	1/1:4,37:40:87.23:961,87,0	1/1:33,0:32:64.28:263,64,0	1/1:2,18:20:54.14:591,54,0	1/1:5,18:24:57.03:582,57,0	1/1:1,20:21:39.58:432,40,0	0/0:14,0:14:32.92:0,33,278	0/0:17,0:17:41.96:0,42,357	0/0:21,0:21:56.98:0,57,494	1/1:16,0:16:37.50:154,37,0	1/1:5,16:20:28.10:538,28,0	1/1:1,14:16:38.98:431,39,0	1/1:4,8:13:20.89:213,21,0
chr10	17211601	.	T	TTA	3853.54	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-12.532;DP=572;FS=0.958;HRun=0;HaplotypeScore=86.0704;InbreedingCoeff=0.9630;MQ=61.53;MQ0=7;MQRankSum=0.068;QD=35.35;ReadPosRankSum=3.221;VQSLOD=5.8743;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:35:99:0,99,1359	0/0:8,0:8:12.95:0,13,54	0/0:13,0:7:16.06:0,16,145	0/0:21,0:11:19.87:0,20,242	0/0:19,0:18:27.52:0,28,110	1/1:2,16:18:36.12:634,36,0	1/1:1,25:26:45.15:792,45,0	0/0:32,0:32:51.79:0,52,261	0/0:26,0:26:74.67:0,75,959	0/0:19,0:19:42.96:0,43,186	0/0:18,0:17:14.45:0,14,83	0/0:24,0:23:69.17:0,69,923	0/0:13,0:13:39.13:0,39,554	0/0:11,0:11:33.10:0,33,449	0/0:20,0:20:43.15:0,43,189	1/1:1,11:12:24.02:422,24,0	0/0:38,0:37:73.88:0,74,272	1/1:0,33:33:72.25:1267,72,0	0/0:20,0:20:41.47:0,41,167	0/0:23,0:23:51.71:0,52,216	0/0:20,0:20:32.19:0,32,110	0/0:14,0:14:39.04:0,39,493	0/0:16,0:16:45.09:0,45,584	0/0:20,0:20:60.19:0,60,825	1/1:2,15:18:42.14:739,42,0	0/0:21,0:20:51.36:0,51,242	0/0:18,0:18:37.58:0,38,155	0/0:13,0:12:6.42:0,6,92
chr10	17212795	.	G	GATGA	6031.01	PASS	AB=0.671;AC=7;AF=0.125;AN=56;BaseQRankSum=-12.424;DP=896;FS=10.741;HRun=0;HaplotypeScore=143.8549;InbreedingCoeff=0.8321;MQ=61.95;MQ0=0;MQRankSum=-0.447;QD=35.27;ReadPosRankSum=-2.186;VQSLOD=4.2645;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,102,1530	0/0:21,0:21:48.11:0,48,694	0/0:31,0:29:32.23:0,32,483	0/0:31,0:31:29.61:0,30,517	0/0:19,0:19:51.08:0,51,763	0/0:19,0:19:45.08:0,45,667	0/0:35,0:35:82.71:0,83,1197	0/1:26,24:51:11.17:1046,0,11	0/0:38,0:38:99:0,99,1614	0/0:26,0:26:63.20:0,63,991	0/0:19,0:19:39.12:0,39,619	0/0:43,0:43:93.24:0,93,1376	0/0:43,0:43:93.23:0,93,1411	0/0:45,0:45:99:0,114,1695	0/0:34,0:34:87.25:0,87,1346	0/0:33,0:33:81.21:0,81,1221	0/0:29,0:29:72.12:0,72,987	0/0:24,0:24:45.02:0,45,634	1/1:13,14:27:21.07:827,21,0	1/1:3,28:32:75.17:1700,75,0	1/1:10,48:60:56.12:2459,56,0	0/0:29,0:29:81.22:0,81,1239	0/0:20,0:20:45.15:0,45,723	0/0:47,0:47:99:0,102,1552	0/0:30,0:30:81.16:0,81,1141	0/0:27,0:27:72.25:0,72,1191	0/0:30,0:29:87.26:0,87,1388	0/0:7,0:7:9:0,9,98
chr10	17214461	.	T	TG	2395.05	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-4.596;DP=627;FS=2.755;HRun=7;HaplotypeScore=66.4380;InbreedingCoeff=0.9850;MQ=66.11;MQ0=0;MQRankSum=0.536;QD=22.18;ReadPosRankSum=1.044;VQSLOD=3.5228;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:78.12:0,78,753	0/0:6,0:6:15.02:0,15,145	0/0:16,0:16:13.89:0,14,341	0/0:10,0:10:22:0,22,228	0/0:18,0:18:42.02:0,42,395	1/1:4,20:24:48.15:580,48,0	1/1:5,21:26:45.05:525,45,0	0/0:25,0:25:38.90:0,39,376	0/0:30,0:30:75.11:0,75,723	0/0:30,0:30:69.10:0,69,666	0/0:15,0:15:42.07:0,42,404	0/0:24,0:24:57.08:0,57,550	0/0:36,0:36:99:0,99,956	0/0:21,0:21:57.07:0,57,544	0/0:36,0:36:90.13:0,90,869	1/1:5,9:14:33.08:378,33,0	0/0:36,0:36:99:0,102,984	1/1:3,26:29:63.19:761,63,0	0/0:15,0:15:23.99:0,24,224	0/0:14,0:14:30.03:0,30,284	0/0:51,0:51:99:0,126,1216	0/0:9,0:9:21.03:0,21,203	0/0:10,0:10:15.01:0,15,142	0/0:24,0:24:57.08:0,57,550	1/1:1,14:15:27.08:326,27,0	0/0:32,0:32:75.09:0,75,719	0/0:16,0:16:45.07:0,45,434	0/0:12,0:12:27.04:0,27,261
chr10	17215374	.	GCTGTCTGT	G	5014.46	PASS	AC=24;AF=0.444;AN=54;BaseQRankSum=7.755;DP=618;FS=12.009;HRun=0;HaplotypeScore=165.1963;InbreedingCoeff=0.8556;MQ=73.66;MQ0=4;MQRankSum=-5.650;QD=20.30;ReadPosRankSum=0.817;VQSLOD=3.4131;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:75.26:0,75,2646	1/1:6,2:8:9.03:227,9,0	0/0:30,0:22:19.57:0,20,315	0/0:32,0:29:14.91:0,15,230	1/1:6,8:14:2.97:76,3,0	0/0:6,0:10:2.99:0,3,24	0/0:11,0:29:29.95:0,30,245	1/1:29,0:28:5.99:50,6,0	0/0:27,0:27:66.18:0,66,2251	1/1:13,19:32:54.14:1144,54,0	./.	0/0:28,0:29:45.14:0,45,1606	0/0:23,0:23:42.13:0,42,1579	0/0:25,0:25:45.14:0,45,1679	1/1:11,21:32:39.13:983,39,0	0/0:8,0:18:15.91:0,16,124	1/1:18,3:21:18.04:343,18,0	0/0:4,0:21:20.65:0,21,182	1/1:17,0:23:8.44:323,8,0	1/1:0,0:7:3.01:56,3,0	1/1:27,0:31:12:158,12,0	0/0:19,0:19:24.08:0,24,917	0/0:11,0:11:24.05:0,24,724	0/0:36,0:37:66.17:0,66,2350	0/0:5,0:12:5.99:0,6,50	1/1:12,12:24:35.22:746,35,0	1/1:6,10:16:27.09:681,27,0	1/1:6,4:10:9.03:227,9,0
chr10	17215428	.	T	TC	548.68	PASS	AB=0.843;AC=15;AF=0.268;AN=56;BaseQRankSum=1.328;DP=528;FS=0.682;HRun=10;HaplotypeScore=110.7026;InbreedingCoeff=0.5132;MQ=63.28;MQ0=0;MQRankSum=0.336;QD=3.47;ReadPosRankSum=-4.805;VQSLOD=-0.4693;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:36:55.94:0,56,449	0/0:7,0:8:6.22:0,6,52	0/1:17,0:18:4.69:5,0,141	0/0:25,0:22:12.78:0,13,240	0/0:10,0:11:11.01:0,11,80	1/1:7,0:7:2.50:9,2,0	1/1:21,0:21:12.30:72,12,0	1/1:16,7:23:9.02:96,9,0	0/0:25,0:27:45.96:0,46,356	0/0:19,0:19:29.90:0,30,244	0/0:6,0:6:8.98:0,9,74	0/0:32,0:34:66.94:0,67,528	0/0:23,0:23:44.87:0,45,362	0/0:25,0:26:55.87:0,56,437	0/0:29,0:30:55.45:0,55,448	1/1:12,0:12:2.29:6,2,0	0/0:17,0:18:37.97:0,38,301	0/1:20,0:20:0:0,0,0	0/1:12,4:16:0.66:169,0,1	0/1:6,3:9:36.98:52,0,37	0/1:15,10:25:15.74:254,0,16	0/0:13,0:14:20.88:0,21,154	0/0:12,0:12:14.92:0,15,123	0/0:26,1:29:26.20:0,26,399	1/1:6,0:6:5.93:39,6,0	0/0:22,0:22:43.97:0,44,350	0/0:20,0:22:42.99:0,43,332	0/0:6,0:6:8.97:0,9,74
chr10	17216668	.	CTGCT	C	3055.60	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-5.363;DP=720;FS=8.315;HRun=0;HaplotypeScore=139.8767;InbreedingCoeff=0.9231;MQ=73.87;MQ0=3;MQRankSum=3.638;QD=15.05;ReadPosRankSum=2.927;VQSLOD=3.0322;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,25:40:24.07:365,24,0	0/0:7,0:7:12.03:0,12,201	0/0:31,0:26:14.74:0,15,108	0/0:30,0:23:0.50:0,0,86	0/0:28,0:28:44.91:0,45,501	0/0:28,0:27:65.68:0,66,743	0/0:24,0:24:42.10:0,42,584	0/0:27,0:27:41.91:0,42,369	0/0:27,0:27:66.17:0,66,1390	0/0:27,0:27:42.09:0,42,695	0/0:13,0:13:15.02:0,15,202	1/1:5,22:27:45.15:722,45,0	1/1:5,25:30:33.11:530,33,0	1/1:12,3:15:27.07:406,27,0	0/0:39,0:39:54.13:0,54,910	0/0:29,0:29:74.65:0,75,799	0/0:27,0:26:36.05:0,36,547	0/0:20,0:20:34.26:0,34,423	0/0:24,0:24:24.72:0,25,251	0/0:10,0:19:20.92:0,21,201	0/0:28,0:29:34.18:0,34,340	1/1:11,14:25:38.52:409,39,0	1/1:13,14:27:21.07:337,21,0	1/1:14,25:39:30.10:482,30,0	0/0:23,0:23:5.99:0,6,49	0/0:24,0:24:50.99:0,51,767	0/0:26,0:26:51.09:0,51,817	0/0:15,0:15:18.03:0,18,273
chr10	17216698	.	G	GCTTC	7593.86	PASS	AB=1.000;AC=31;AF=0.554;AN=56;BaseQRankSum=-2.769;DP=690;FS=0.782;HRun=0;HaplotypeScore=128.0464;InbreedingCoeff=0.7403;MQ=57.65;MQ0=7;MQRankSum=-0.498;QD=19.62;ReadPosRankSum=2.974;VQSLOD=4.6758;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:68.85:0,69,623	1/1:1,6:8:14.86:256,15,0	0/0:24,0:10:8.86:0,9,61	0/0:29,0:14:16.57:0,17,147	1/1:8,14:25:41:581,41,0	1/1:32,0:30:65.97:643,66,0	1/1:28,0:28:61.91:448,62,0	0/0:29,0:26:36.39:0,36,340	0/0:29,0:29:72.13:0,72,977	1/1:5,12:19:44.91:632,45,0	1/1:1,8:9:23.62:270,24,0	0/0:27,0:27:57.12:0,57,641	0/0:31,0:31:51.04:0,51,529	0/0:13,0:13:30.66:0,31,313	1/1:6,31:37:39.13:961,39,0	1/1:34,0:34:74.33:749,74,0	1/1:6,16:20:18.06:443,18,0	1/1:23,0:23:33.03:416,33,0	0/1:22,0:20:56.85:57,0,203	0/1:15,0:15:53.39:53,0,81	0/1:23,0:23:15.05:15,0,187	0/0:24,0:24:37.98:0,38,339	0/0:21,0:21:38.88:0,39,373	0/0:33,0:33:50.99:0,51,524	1/1:1,0:20:3.01:44,3,0	1/1:17,5:22:50.97:922,51,0	1/1:3,33:37:35.82:882,36,0	1/1:4,7:11:9.03:222,9,0
chr10	17218597	.	G	GC	13983.21	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-7.110;DP=836;FS=5.696;HRun=2;HaplotypeScore=82.7582;InbreedingCoeff=1.0000;MQ=82.85;MQ0=0;MQRankSum=-3.489;QD=37.79;ReadPosRankSum=2.830;VQSLOD=5.5362;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:56:99:0,165,2031	1/1:0,13:13:39.13:561,39,0	0/0:17,0:17:47.99:0,48,547	0/0:30,0:30:72.42:0,72,888	1/1:0,32:32:81.27:1165,81,0	1/1:1,24:25:60.20:864,60,0	1/1:0,22:22:60.20:864,60,0	0/0:42,0:42:99:0,117,1427	0/0:38,0:38:99:0,108,1339	1/1:4,34:38:99:1436,102,0	1/1:1,19:20:42.14:604,42,0	0/0:30,0:30:90.28:0,90,1116	0/0:41,0:41:99:0,117,1447	0/0:26,0:26:72.23:0,72,892	1/1:0,34:34:90.30:1296,90,0	1/1:1,29:30:81.27:1166,81,0	1/1:0,28:28:75.25:1079,75,0	1/1:0,25:25:66.19:928,66,0	0/0:30,0:30:84.25:0,84,1030	0/0:41,0:41:99:0,114,1413	0/0:25,0:25:69.22:0,69,855	0/0:29,0:29:84.25:0,84,1028	0/0:33,0:33:93.28:0,93,1139	0/0:28,0:28:81.25:0,81,1004	1/1:0,27:27:78.22:1100,78,0	1/1:0,26:26:75.24:1061,75,0	1/1:1,28:29:72.24:1036,72,0	1/1:0,21:21:57.19:820,57,0
chr10	17218878	.	CA	C	7197.63	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=22.599;DP=820;FS=6.833;HRun=3;HaplotypeScore=161.2723;InbreedingCoeff=0.9998;MQ=81.97;MQ0=1;MQRankSum=-15.542;QD=19.72;ReadPosRankSum=3.903;VQSLOD=3.9482;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,120,1693	1/1:3,9:12:30.29:228,30,0	0/0:25,0:25:66.17:0,66,904	0/0:29,0:29:53.08:0,53,896	1/1:5,17:22:50.47:387,50,0	1/1:2,18:20:53.77:428,54,0	1/1:6,20:26:66.46:442,66,0	0/0:28,0:28:81.25:0,81,1133	0/0:38,0:38:99:0,108,1555	1/1:5,20:25:46.23:418,46,0	1/1:1,17:18:50.47:356,50,0	0/0:45,0:45:99:0,135,1943	0/0:32,0:32:96.31:0,96,1362	0/0:31,0:31:93.31:0,93,1337	1/1:4,43:47:99:1104,133,0	1/1:6,37:43:99:998,118,0	1/1:6,18:23:44.78:393,45,0	1/1:5,9:14:26.91:222,27,0	0/0:26,0:26:72.19:0,72,966	0/0:32,0:32:96.30:0,96,1347	0/0:45,0:44:99:0,129,1821	0/0:27,0:27:81.25:0,81,1129	0/0:29,0:29:75.19:0,75,1022	0/0:26,0:26:75.24:0,75,1063	1/1:3,23:26:65.67:521,66,0	1/1:4,27:33:84.26:635,84,0	1/1:8,24:32:77.68:617,78,0	1/1:4,19:23:56.66:449,57,0
chr10	17218880	.	A	AG	3520.54	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=22.801;DP=808;FS=8.448;HRun=0;HaplotypeScore=177.2913;InbreedingCoeff=0.9994;MQ=82.43;MQ0=1;MQRankSum=-14.087;QD=10.15;ReadPosRankSum=3.199;VQSLOD=3.7109;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,120,1646	1/1:10,1:11:24.30:90,24,0	0/0:24,0:24:69.19:0,69,929	0/0:29,0:29:50.96:0,51,928	1/1:19,0:19:40.94:178,41,0	1/1:18,0:18:46.67:202,47,0	1/1:24,0:24:50.27:222,50,0	0/0:30,0:30:87.26:0,87,1155	0/0:37,0:37:99:0,108,1511	1/1:26,0:26:40.48:206,40,0	1/1:19,0:19:38.24:130,38,0	0/0:46,0:46:99:0,138,1910	0/0:33,0:33:96.31:0,96,1314	0/0:32,0:32:96.31:0,96,1321	1/1:48,0:48:99:570,124,0	1/1:38,4:42:99:445,101,0	1/1:21,0:21:48.27:223,48,0	1/1:9,3:12:22.99:107,23,0	0/0:26,0:26:74.24:0,74,965	0/0:32,0:32:96.31:0,96,1325	0/0:46,0:45:99:0,129,1770	0/0:27,0:27:81.24:0,81,1096	0/0:30,0:30:81.19:0,81,1046	0/0:26,0:26:75.25:0,75,1048	1/1:25,0:25:58.66:249,59,0	1/1:30,0:30:66.94:267,67,0	1/1:29,0:29:73.38:345,73,0	1/1:23,0:23:59.51:287,60,0
chr10	17218882	.	GCAC	G	13406.10	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=23.161;DP=788;FS=7.815;HRun=0;HaplotypeScore=168.1809;InbreedingCoeff=0.9998;MQ=84.28;MQ0=1;MQRankSum=-16.206;QD=39.66;ReadPosRankSum=3.230;VQSLOD=5.8506;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,117,2879	1/1:1,9:10:30.10:408,30,0	0/0:26,0:26:78.25:0,78,1786	0/0:30,0:30:83.34:0,83,1824	1/1:0,17:17:45.15:620,45,0	1/1:0,18:18:54.18:766,54,0	1/1:3,20:23:63.19:789,63,0	0/0:29,0:29:87.29:0,87,2046	0/0:37,0:37:99:0,108,2610	1/1:1,23:24:50.90:806,51,0	1/1:1,18:19:57.10:755,57,0	0/0:45,0:45:99:0,135,3270	0/0:29,0:29:81.28:0,81,1905	0/0:32,0:32:96.33:0,96,2302	1/1:4,43:47:99:2019,141,0	1/1:5,37:42:99:1782,123,0	1/1:3,18:21:59.65:779,60,0	1/1:1,9:10:27.09:385,27,0	0/0:26,0:26:75.26:0,75,1821	0/0:32,0:32:96.33:0,96,2302	0/0:45,0:44:99:0,132,3165	0/0:25,0:25:75.25:0,75,1785	0/0:28,0:28:78.27:0,78,1896	0/0:26,0:26:78.27:0,78,1919	1/1:4,22:26:78.11:1036,78,0	1/1:3,27:30:90.29:1233,90,0	1/1:4,24:28:81.24:1109,81,0	1/1:4,19:23:69.16:919,69,0
chr10	17220559	.	AACACAC	A	1215.38	PASS	AB=0.913;AC=8;AF=0.143;AN=56;BaseQRankSum=2.650;DP=571;FS=7.962;HRun=0;HaplotypeScore=143.6938;InbreedingCoeff=0.4012;MQ=64.29;MQ0=15;MQRankSum=0.596;QD=11.80;ReadPosRankSum=-1.677;VQSLOD=1.8005;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:45:76.25:0,76,2213	0/0:10,0:9:16.60:0,17,309	0/0:30,0:22:18.04:0,18,310	0/0:32,0:26:36.09:0,36,637	0/0:16,0:15:5.99:0,6,61	0/0:16,0:15:9.01:0,9,220	0/0:29,0:26:18.04:0,18,369	1/1:15,13:27:39.13:778,39,0	0/0:22,0:22:45.09:0,45,1096	0/0:16,0:13:19.61:0,20,318	0/1:8,0:8:0:0,0,0	0/0:23,0:22:42.14:0,42,999	0/0:30,0:28:60.16:0,60,1449	0/0:21,0:20:37.37:0,37,1013	0/0:18,0:21:12.04:0,12,303	0/0:25,0:21:8.53:0,9,114	0/0:14,0:10:5.95:0,6,52	0/0:8,0:9:15.05:0,15,370	0/1:6,7:13:4.63:215,0,5	1/1:16,1:15:1.26:183,1,0	0/1:17,0:14:11.30:150,0,11	0/0:24,0:24:45.13:0,45,1265	0/0:13,0:13:21.05:0,21,514	0/0:25,0:23:30.06:0,30,674	0/1:11,0:17:16.19:17,0,16	0/0:20,0:19:33.10:0,33,704	0/0:13,0:12:11.98:0,12,182	0/0:5,0:5:3.90:0,4,58
chr10	17220587	.	C	CAG	507.01	PASS	AB=1.000;AC=19;AF=0.365;AN=52;BaseQRankSum=3.796;DP=603;FS=18.550;HRun=0;HaplotypeScore=164.8233;InbreedingCoeff=0.3759;MQ=43.36;MQ0=20;MQRankSum=-5.076;QD=1.80;ReadPosRankSum=-3.717;VQSLOD=0.6608;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:47:62.24:0,62,559	1/1:14,0:12:7.55:35,8,0	./.	./.	0/0:16,0:14:0.44:0,0,1	0/0:17,0:14:0:0,0,0	1/1:30,0:26:0.42:1,0,0	1/1:46,0:45:51.60:305,52,0	0/0:27,0:27:28.81:0,29,387	0/0:14,0:10:0.98:0,1,67	0/0:12,0:10:0:0,0,0	0/1:24,0:24:7.85:8,0,195	0/0:29,0:33:18.91:0,19,330	0/0:30,0:31:21.35:0,21,306	1/1:24,0:24:2.59:18,3,0	0/1:26,0:21:0.09:0,0,0	0/0:13,0:9:0.89:0,1,2	0/1:15,0:15:18.12:18,0,20	1/1:19,0:19:10.45:45,10,0	1/1:19,0:17:1.98:5,2,0	1/1:22,0:14:2.44:63,2,0	0/0:21,0:21:35.96:0,36,366	0/1:21,0:20:2.49:140,0,2	0/0:18,16:33:14.98:0,15,129	0/0:12,0:11:1.47:0,1,5	0/1:20,0:18:7.70:8,0,68	0/0:10,0:9:2.90:0,3,16	0/0:9,0:8:8.65:0,9,47
chr10	17220608	.	AGAGAG	A	259.46	PASS	AB=0.887;AC=14;AF=0.269;AN=52;BaseQRankSum=8.664;DP=629;FS=12.118;HRun=0;HaplotypeScore=180.7271;InbreedingCoeff=0.0144;MQ=44.87;MQ0=19;MQRankSum=-5.243;QD=1.20;ReadPosRankSum=-1.661;VQSLOD=1.6588;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:47:79.78:0,80,2326	0/1:10,3:11:12.06:12,0,181	./.	./.	1/1:15,1:16:4:15,4,0	0/1:16,0:13:0:1,0,0	0/1:25,0:19:7.05:7,0,140	0/0:56,0:52:99:0,150,2735	0/0:28,0:28:79.82:0,80,1812	0/1:11,4:12:99:141,0,109	1/1:16,2:16:1.41:3,1,0	0/0:27,0:27:62.72:0,63,1402	0/0:32,0:30:69.23:0,69,1718	0/0:34,0:34:77.75:0,78,1724	0/1:18,2:28:8.02:8,0,108	0/1:23,0:20:7.05:7,0,29	0/0:11,2:12:3.01:0,3,32	0/0:16,0:16:21.05:0,21,385	0/0:20,0:19:54.16:0,54,992	0/0:24,0:22:32.58:0,33,613	0/0:24,0:16:27.09:0,27,653	0/0:28,0:28:71.03:0,71,1528	0/0:21,0:21:26.88:0,27,697	0/0:37,0:34:35.94:0,36,781	0/1:11,0:11:0.51:1,0,59	0/1:24,5:26:99:107,0,487	0/1:9,2:11:15.23:15,0,30	0/1:8,2:9:19.11:74,0,19
chr10	17220610	.	AGAG	A	86.08	PASS	AB=0.976;AC=13;AF=0.241;AN=54;BaseQRankSum=8.791;DP=639;FS=9.941;HRun=0;HaplotypeScore=162.4517;InbreedingCoeff=0.1253;MQ=45.21;MQ0=19;MQRankSum=-4.981;QD=0.42;ReadPosRankSum=-1.476;VQSLOD=2.0674;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:48:96.16:0,96,1901	0/0:12,0:10:2.69:0,3,145	./.	0/0:3,0:1:0:0,0,0	1/1:17,0:16:4.22:14,4,0	0/1:17,0:14:0:1,0,0	0/1:24,0:18:9.96:10,0,115	0/0:57,0:53:99:0,153,2387	0/0:29,0:29:77.84:0,78,1416	0/1:17,0:14:71.23:71,0,124	1/1:18,0:16:1.41:4,1,0	0/0:28,0:28:65.71:0,66,1143	0/0:33,0:31:72.24:0,72,1380	0/0:34,0:34:76.48:0,76,1348	0/1:21,8:29:7.63:8,0,85	0/1:22,0:19:6.84:7,0,21	0/0:13,0:12:3.01:0,3,38	0/0:16,0:16:21.06:0,21,330	0/0:22,0:21:60.15:0,60,913	0/0:23,0:21:29.57:0,30,483	0/0:24,0:17:30.10:0,30,549	0/0:28,0:28:66.71:0,67,1263	0/0:20,0:20:23.90:0,24,501	0/0:38,0:35:38.73:0,39,684	0/1:11,0:11:0.60:1,0,50	0/1:29,0:26:45.39:45,0,445	0/1:11,0:11:2.23:5,0,2	0/1:10,0:9:19.25:46,0,19
chr10	17220617	.	GAC	G	794.35	PASS	AB=0.992;AC=26;AF=0.481;AN=54;BaseQRankSum=11.427;DP=669;FS=2.277;HRun=0;HaplotypeScore=150.9271;InbreedingCoeff=0.5108;MQ=46.46;MQ0=26;MQRankSum=-5.683;QD=2.38;ReadPosRankSum=-2.854;VQSLOD=2.1066;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:49:57.70:0,58,1096	1/1:12,0:10:11.30:66,11,0	./.	0/0:13,0:4:2.64:0,3,15	1/1:17,0:16:11.81:72,12,0	1/1:15,0:12:0.17:1,0,0	0/1:24,0:19:19.56:20,0,27	0/1:58,0:53:28.87:29,0,409	0/0:28,0:28:40.02:0,40,781	1/1:17,0:15:19.62:223,20,0	1/1:22,0:20:11.31:67,11,0	0/0:21,4:25:16.53:0,17,616	0/0:34,0:32:77.98:0,78,890	0/0:33,0:33:71.56:0,72,841	1/1:30,0:29:15:90,15,0	0/1:25,0:22:0.16:0,0,0	0/1:15,0:14:4.57:26,0,5	0/1:16,0:16:12.27:12,0,17	0/0:23,0:21:24.69:0,25,233	0/0:27,0:25:32.58:0,33,256	0/0:24,0:19:36:0,36,366	0/0:26,0:26:66.72:0,67,806	0/1:20,1:21:13.86:14,0,285	0/0:42,0:40:44.50:0,45,488	1/1:11,0:12:0.47:1,0,0	1/1:28,0:25:46.08:268,46,0	1/1:13,0:13:5.67:28,6,0	1/1:9,0:8:11.53:61,12,0
chr10	17220627	.	CAGACAG	C	2814.06	PASS	AB=0.658;AC=20;AF=0.370;AN=54;BaseQRankSum=10.625;DP=685;FS=8.202;HRun=0;HaplotypeScore=160.1603;InbreedingCoeff=0.7067;MQ=47.44;MQ0=37;MQRankSum=-3.807;QD=12.62;ReadPosRankSum=0.466;VQSLOD=2.2289;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:48:91.78:0,92,2217	1/1:1,9:8:8.75:154,9,0	./.	0/0:21,0:6:9.91:0,10,117	1/1:4,14:14:16.86:257,17,0	0/1:1,0:12:0.25:0,0,0	0/1:23,0:19:7:7,0,188	0/0:58,0:53:99:0,125,1979	0/0:26,0:26:54.89:0,55,1967	1/1:15,4:14:33.09:685,33,0	1/1:5,19:20:12.01:219,12,0	0/0:23,0:23:66.20:0,66,1778	0/0:32,0:31:77.84:0,78,1955	0/0:33,0:33:78.68:0,79,2027	1/1:3,24:25:12.90:228,13,0	0/0:3,0:21:11.69:0,12,68	0/1:2,17:19:4.42:102,0,4	0/1:5,0:17:11.49:31,0,11	0/0:21,0:17:41.89:0,42,671	0/0:26,0:25:48.14:0,48,1004	0/0:29,0:24:54.17:0,54,1247	0/0:28,0:28:59.18:0,59,1528	0/0:23,0:23:39.13:0,39,1011	0/0:41,0:40:56.83:0,57,1407	0/0:13,0:14:6.77:0,7,63	1/1:5,22:23:53.75:963,54,0	1/1:0,17:17:5.87:94,6,0	1/1:1,8:8:12.04:265,12,0
chr10	17220631	.	CAG	C	1478.03	PASS	AC=22;AF=0.407;AN=54;BaseQRankSum=10.621;DP=685;FS=9.334;HRun=0;HaplotypeScore=131.6807;InbreedingCoeff=0.8666;MQ=48.06;MQ0=35;MQRankSum=-3.788;QD=7.62;ReadPosRankSum=1.070;VQSLOD=2.4153;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:50:99:0,99,1441	1/1:10,0:8:8.87:97,9,0	./.	0/0:22,0:6:9.01:0,9,100	1/1:17,1:14:14.28:163,14,0	1/1:13,0:12:0.17:1,0,0	0/0:17,5:18:20.80:0,21,196	0/0:57,0:51:99:0,108,1505	0/0:26,0:26:72.24:0,72,1172	1/1:9,8:14:30.09:348,30,0	1/1:23,0:20:11.65:151,12,0	0/0:24,0:24:68.94:0,69,1069	0/0:35,0:34:78.23:0,78,1210	0/0:33,0:33:72.24:0,72,1173	1/1:24,2:24:11.46:151,11,0	0/0:23,0:21:11.83:0,12,86	1/1:17,1:18:6.02:76,6,0	1/1:16,0:16:2.97:20,3,0	0/0:21,0:17:23.35:0,23,448	0/0:26,0:25:45.15:0,45,715	0/0:28,0:24:54.18:0,54,847	0/0:29,0:29:63.19:0,63,976	0/0:20,0:21:39.12:0,39,606	0/0:42,0:41:56.70:0,57,903	0/0:12,0:16:13.80:0,14,86	1/1:25,1:22:44.90:513,45,0	1/1:17,0:17:4.91:33,5,0	1/1:9,0:8:12.02:121,12,0
chr10	17221264	.	C	CTTT	2503.91	PASS	AB=0.931;AC=28;AF=0.500;AN=56;BaseQRankSum=3.991;DP=249;FS=0.000;HRun=9;HaplotypeScore=83.0067;InbreedingCoeff=0.6283;MQ=32.46;MQ0=2;MQRankSum=-1.680;QD=18.83;ReadPosRankSum=-0.502;VQSLOD=1.0830;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:15.56:0,16,343	0/1:3,0:4:3.31:58,0,3	0/1:11,0:2:0:0,0,0	0/0:3,0:1:3.01:0,3,31	0/1:10,0:10:5.66:96,0,6	1/1:1,2:6:17.84:237,18,0	1/1:1,2:3:8.82:129,9,0	0/0:9,0:8:0.87:0,1,125	0/0:8,0:8:14.78:0,15,108	1/1:9,0:9:12.37:159,12,0	1/1:6,0:4:9.03:108,9,0	0/0:9,0:9:23.14:0,23,161	0/0:9,0:10:5.60:0,6,176	0/0:8,0:8:17.83:0,18,144	1/1:5,0:5:4.04:82,4,0	1/1:1,5:10:29.84:408,30,0	1/1:5,1:6:12.29:154,12,0	1/1:3,2:7:18.05:266,18,0	0/0:6,0:6:17.95:0,18,151	0/0:20,0:21:6.23:0,6,291	0/0:2,0:2:5.99:0,6,48	0/1:6,0:6:2.07:2,0,97	0/0:10,0:11:26.81:0,27,217	0/0:6,0:6:2.91:0,3,25	1/1:6,8:14:9:460,9,0	1/1:11,0:12:16.87:237,17,0	1/1:14,0:12:11.27:205,11,0	1/1:4,1:5:9.84:93,10,0
chr10	17221273	.	TC	T	1507.39	PASS	AB=0.971;AC=40;AF=0.714;AN=56;BaseQRankSum=2.865;DP=283;FS=1.616;HRun=1;HaplotypeScore=53.1792;InbreedingCoeff=0.0631;MQ=41.58;MQ0=4;MQRankSum=-3.558;QD=6.05;ReadPosRankSum=-1.909;VQSLOD=-0.0965;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:20,3:23:79.57:122,0,80	1/1:5,0:5:11.87:73,12,0	0/0:16,0:4:8.29:0,8,50	0/0:7,0:3:8.65:0,9,63	1/1:13,1:14:6.14:89,6,0	1/1:6,0:6:13.85:54,14,0	1/1:3,1:3:8.04:32,8,0	0/1:11,0:10:20.20:20,0,32	0/1:8,0:8:15.46:35,0,15	1/1:10,0:10:22.04:138,22,0	1/1:7,0:5:9.37:60,9,0	0/1:8,1:9:33.48:33,0,34	0/1:11,0:11:19.54:20,0,42	0/1:8,0:8:22.21:37,0,22	1/1:5,0:5:5.14:24,5,0	1/1:9,1:10:26.57:122,27,0	1/1:8,1:8:12.26:60,12,0	1/1:6,2:8:16.90:95,17,0	0/1:9,0:8:24.01:24,0,40	0/1:23,2:23:61.55:144,0,62	0/1:2,0:2:3.80:10,0,4	0/1:6,0:6:6.50:7,0,25	0/0:11,0:11:22.38:0,22,82	1/1:8,0:8:4.28:74,4,0	1/1:16,1:15:19.57:118,20,0	1/1:12,1:13:18.41:141,18,0	1/1:14,1:12:3.31:46,3,0	1/1:5,1:6:15.15:100,15,0
chr10	17221277	.	TCC	T	613.30	PASS	AB=0.878;AC=11;AF=0.196;AN=56;BaseQRankSum=3.352;DP=310;FS=3.587;HRun=2;HaplotypeScore=64.5737;InbreedingCoeff=-0.2616;MQ=42.53;MQ0=5;MQRankSum=-2.655;QD=5.24;ReadPosRankSum=-0.369;VQSLOD=-0.6089;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:60.60:0,61,1056	0/1:4,2:6:78.59:79,0,132	0/0:16,0:4:9.02:0,9,118	0/0:7,0:3:8.82:0,9,84	0/1:16,1:17:36.32:36,0,273	0/0:6,0:6:11.28:0,11,157	0/0:3,1:3:9.01:0,9,88	0/0:12,0:11:23.97:0,24,365	0/0:8,0:8:17.80:0,18,296	0/1:7,5:11:99:204,0,218	0/1:7,1:6:15.43:15,0,165	0/0:12,0:12:36.07:0,36,576	0/0:11,0:11:33.10:0,33,515	0/0:9,0:9:25.90:0,26,408	0/1:5,0:5:14.92:15,0,76	0/1:11,0:11:2.73:3,0,298	0/1:8,2:9:65.97:66,0,189	0/1:11,0:11:36.33:36,0,142	0/0:10,0:9:24.07:0,24,388	0/0:26,0:24:69.11:0,69,1046	0/0:3,0:3:7.84:0,8,112	0/0:8,0:8:21.03:0,21,373	0/0:11,0:11:27.02:0,27,473	0/0:9,0:9:21.06:0,21,275	0/0:17,0:15:1.30:0,1,304	0/1:12,3:15:99:135,0,305	0/1:13,3:13:99:112,0,275	0/1:5,1:6:49.18:55,0,49
chr10	17224460	.	GA	G	6091.88	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=10.429;DP=553;FS=3.384;HRun=9;HaplotypeScore=68.6520;InbreedingCoeff=0.9864;MQ=76.40;MQ0=0;MQRankSum=-3.100;QD=22.23;ReadPosRankSum=3.875;VQSLOD=5.7858;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:72.20:0,72,818	1/1:1,8:9:24.01:220,24,0	0/0:27,0:24:40.44:0,40,529	0/0:17,2:18:6.69:0,7,252	1/1:2,21:23:60.02:549,60,0	1/1:5,27:32:75.02:686,75,0	1/1:0,10:10:27.01:247,27,0	0/0:33,0:33:90.23:0,90,1016	0/0:9,0:9:27.08:0,27,312	1/1:2,20:22:60.03:549,60,0	1/1:1,16:17:45.02:412,45,0	0/0:13,0:13:30.05:0,30,327	0/0:14,0:14:39.11:0,39,448	0/0:17,0:17:51.13:0,51,571	1/1:5,16:21:45.01:412,45,0	1/1:2,13:15:36.01:329,36,0	1/1:5,26:31:72.03:659,72,0	1/1:5,11:16:33.01:302,33,0	0/0:23,0:23:60.12:0,60,666	0/0:18,0:18:48.14:0,48,554	0/0:14,0:14:39.11:0,39,449	0/0:25,0:25:72.21:0,72,829	0/0:17,0:17:48.14:0,48,554	0/0:23,0:23:63.16:0,63,707	1/1:4,10:14:24.01:220,24,0	1/1:3,23:26:69.03:629,69,0	1/1:0,21:21:54.03:494,54,0	1/1:1,16:17:41.98:384,42,0
chr10	17228945	.	C	CAG	5067.12	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=3.224;DP=548;FS=13.726;HRun=0;HaplotypeScore=90.1846;InbreedingCoeff=0.9964;MQ=76.48;MQ0=3;MQRankSum=-0.740;QD=35.19;ReadPosRankSum=3.596;VQSLOD=6.5921;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:57.19:0,57,740	1/1:0,6:6:15.05:255,15,0	0/0:42,0:35:53.08:0,53,774	0/0:42,0:33:37.27:0,37,557	1/1:4,18:22:39.13:658,39,0	0/0:14,0:14:39.11:0,39,492	0/0:19,0:19:39.13:0,39,507	0/0:26,0:26:57.17:0,57,715	0/0:21,0:21:60.16:0,60,748	1/1:2,18:20:57.19:960,57,0	1/1:3,11:14:27.09:459,27,0	0/0:18,0:18:51.15:0,51,648	0/0:14,0:14:39.13:0,39,507	0/0:17,0:17:42.14:0,42,545	1/1:4,10:14:27.09:459,27,0	0/0:15,0:15:27.02:0,27,330	1/1:2,16:17:27.09:458,27,0	0/0:19,0:19:48.16:0,48,624	0/0:19,0:19:47.94:0,48,597	0/0:17,0:17:33.11:0,33,429	0/0:24,0:24:60.19:0,60,776	0/0:14,0:14:33.11:0,33,429	0/0:23,0:23:66.18:0,66,827	0/0:23,0:23:57.18:0,57,739	0/0:13,0:13:30.10:0,30,389	1/1:2,17:19:51.10:802,51,0	1/1:2,15:15:32.68:560,33,0	1/1:3,11:14:27.09:457,27,0
chr10	17229302	.	GA	G	3926.09	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=14.469;DP=488;FS=3.792;HRun=9;HaplotypeScore=63.2949;InbreedingCoeff=0.9883;MQ=70.77;MQ0=0;MQRankSum=-1.482;QD=24.39;ReadPosRankSum=0.924;VQSLOD=4.6116;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:69.19:0,69,786	1/1:0,3:3:9:82,9,0	0/0:16,0:14:17.63:0,18,210	0/0:9,0:8:20.68:0,21,174	1/1:4,28:32:84.04:769,84,0	0/0:26,0:26:72.21:0,72,831	0/0:16,0:16:45.09:0,45,505	0/0:26,0:26:69.16:0,69,766	0/0:15,0:15:45.13:0,45,519	1/1:3,24:27:69.03:632,69,0	1/1:1,17:18:48.02:439,48,0	0/0:9,0:9:27.08:0,27,311	0/0:12,0:12:33.10:0,33,381	0/0:11,0:11:30.07:0,30,336	1/1:1,10:11:30.02:275,30,0	0/0:16,0:16:48.14:0,48,554	1/1:1,16:17:48.02:439,48,0	0/0:15,0:15:39.12:0,39,449	0/0:20,0:20:57.15:0,57,647	0/0:16,0:16:45.11:0,45,499	0/0:15,0:15:36.09:0,36,405	0/0:15,0:15:45.13:0,45,519	0/0:26,0:26:63.19:0,63,727	0/0:13,0:13:39.12:0,39,450	0/0:28,0:28:72.21:0,72,830	1/1:1,19:20:51.03:467,51,0	1/1:3,19:22:57.02:522,57,0	1/1:0,11:11:33.02:302,33,0
chr10	17229392	.	CGT	C	958.52	PASS	AB=0.911;AC=15;AF=0.288;AN=52;BaseQRankSum=-2.170;DP=562;FS=7.355;HRun=0;HaplotypeScore=82.5109;InbreedingCoeff=0.5845;MQ=58.06;MQ0=9;MQRankSum=1.716;QD=5.45;ReadPosRankSum=1.607;VQSLOD=1.3863;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:17,4:21:6.01:66,6,0	0/0:4,0:5:6.01:0,6,67	./.	./.	0/0:31,0:32:32.94:0,33,272	0/1:17,1:26:20.82:21,0,64	0/0:12,0:21:27.01:0,27,272	0/0:29,0:27:20.92:0,21,217	1/1:7,5:13:20.89:208,21,0	0/0:21,0:21:33.02:0,33,354	0/0:14,0:15:5.98:0,6,68	1/1:13,3:16:9.02:98,9,0	1/1:9,4:14:14.94:163,15,0	0/1:14,3:18:99:132,0,116	0/0:10,0:15:32.05:0,32,302	0/0:5,0:7:9.48:0,9,98	0/0:24,0:29:42.51:0,43,425	0/0:16,0:35:33.51:0,34,357	0/0:13,0:13:8.99:0,9,89	0/0:17,0:16:11.96:0,12,96	0/0:28,0:44:19.83:0,20,193	1/1:12,4:15:3.01:33,3,0	0/1:19,2:21:35.83:57,0,36	1/1:19,12:30:33.08:354,33,0	0/0:14,0:18:12.02:0,12,138	0/0:22,0:21:20.95:0,21,190	0/0:16,0:17:23.99:0,24,222	0/0:11,0:16:23.96:0,24,210
chr10	17229681	.	A	AT	4817.03	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-11.952;DP=615;FS=2.045;HRun=8;HaplotypeScore=56.9689;InbreedingCoeff=0.9962;MQ=74.45;MQ0=0;MQRankSum=-2.398;QD=27.84;ReadPosRankSum=0.449;VQSLOD=5.3641;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,132,1207	1/1:1,5:6:15.04:173,15,0	0/0:19,0:20:49.84:0,50,412	0/0:18,0:18:21.80:0,22,242	1/1:4,40:44:99:1197,107,0	0/0:18,0:18:45.02:0,45,412	0/0:23,0:23:51.01:0,51,466	0/0:41,0:41:90.02:0,90,823	0/0:20,0:20:50.94:0,51,449	1/1:1,15:16:45.13:519,45,0	1/1:0,15:15:45.13:516,45,0	0/0:24,0:24:72.03:0,72,654	0/0:21,0:21:57.02:0,57,522	0/0:21,0:21:50.99:0,51,461	1/1:2,15:17:33.10:381,33,0	0/0:27,0:27:75.04:0,75,687	1/1:4,23:27:66.20:762,66,0	0/0:25,0:25:69.03:0,69,632	0/0:15,0:15:33.01:0,33,302	0/0:15,0:15:38.50:0,39,334	0/0:16,0:16:42.02:0,42,384	0/0:18,0:18:54.01:0,54,489	0/0:30,0:30:84.02:0,84,763	0/0:20,0:20:48.02:0,48,439	0/0:22,0:22:60.02:0,60,549	1/1:3,18:22:56.95:612,57,0	1/1:2,14:15:36.11:415,36,0	1/1:0,10:10:21.06:242,21,0
chr10	17230693	.	A	AC	6301.64	PASS	AB=1.000;AC=20;AF=0.357;AN=56;BaseQRankSum=-12.551;DP=605;FS=6.561;HRun=0;HaplotypeScore=62.6015;InbreedingCoeff=0.8604;MQ=63.87;MQ0=8;MQRankSum=1.433;QD=28.77;ReadPosRankSum=6.695;VQSLOD=4.8074;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:90:0,90,1034	1/1:0,12:12:30.10:396,30,0	0/1:11,0:8:8.23:8,0,127	0/1:9,0:7:9.79:10,0,74	1/1:0,29:29:86.87:1036,87,0	0/0:17,0:17:46.77:0,47,561	0/0:19,0:19:57:0,57,674	0/0:31,0:31:88.43:0,88,995	0/0:18,0:18:53.97:0,54,561	1/1:2,24:26:72.20:940,72,0	1/1:1,26:27:71.95:887,72,0	0/0:25,0:24:63.58:0,64,738	0/0:16,0:16:42.04:0,42,457	0/0:16,0:16:48.03:0,48,483	1/1:0,17:17:30.10:398,30,0	0/0:16,0:16:45.07:0,45,518	1/1:2,29:31:62.82:869,63,0	0/0:33,0:32:76.45:0,76,961	0/0:28,0:25:61.33:0,61,724	0/0:36,0:35:99:0,100,1146	0/0:24,0:24:69.12:0,69,817	0/0:13,0:13:32.37:0,32,428	0/0:18,0:18:46.82:0,47,616	0/0:22,0:21:51.87:0,52,667	0/0:21,0:21:63.09:0,63,785	1/1:2,18:20:50.50:684,50,0	1/1:2,24:24:60.19:796,60,0	1/1:2,9:9:21.07:278,21,0
chr10	17231317	.	CGG	C	1933.09	PASS	AB=1.000;AC=19;AF=0.365;AN=52;BaseQRankSum=5.671;DP=409;FS=33.658;HRun=5;HaplotypeScore=53.9289;InbreedingCoeff=0.8828;MQ=36.94;MQ0=95;MQRankSum=-4.089;QD=15.46;ReadPosRankSum=4.570;VQSLOD=-0.7162;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:18:20.33:0,20,298	1/1:4,4:7:14.97:167,15,0	./.	./.	1/1:6,9:13:23.93:284,24,0	0/0:14,0:10:15.04:0,15,231	0/0:25,0:21:48.05:0,48,669	0/0:16,0:9:21.03:0,21,318	0/0:10,0:8:18.04:0,18,293	1/1:4,7:7:15.01:187,15,0	1/1:2,12:13:26.92:325,27,0	0/0:2,0:10:9.02:0,9,97	0/1:5,0:5:1.65:2,0,99	0/0:5,0:12:15.01:0,15,177	1/1:2,10:11:8.98:103,9,0	0/0:10,0:10:18.02:0,18,274	1/1:12,13:15:27.07:358,27,0	0/0:24,1:21:6.25:0,6,652	0/0:13,0:8:21.07:0,21,366	0/0:14,0:14:30.09:0,30,483	0/0:14,0:11:18.05:0,18,291	0/0:4,0:10:14.97:0,15,159	0/0:4,0:9:12.02:0,12,155	0/0:13,0:13:17.87:0,18,187	0/0:13,0:9:18.06:0,18,300	1/1:5,10:12:27.08:359,27,0	1/1:7,2:8:18:181,18,0	1/1:6,4:5:12.04:167,12,0
chr10	17231457	.	G	GA	850.46	PASS	AB=0.955;AC=5;AF=0.089;AN=56;BaseQRankSum=5.799;DP=535;FS=0.000;HRun=10;HaplotypeScore=66.4190;InbreedingCoeff=0.6382;MQ=56.15;MQ0=8;MQRankSum=-4.191;QD=12.51;ReadPosRankSum=-1.851;VQSLOD=2.9189;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,1:35:30.50:0,31,460	0/0:4,0:4:8.97:0,9,71	0/1:18,1:5:21.68:22,0,34	0/0:12,0:6:0.63:0,1,9	0/0:25,0:26:61.45:0,61,497	0/0:19,0:19:32.94:0,33,271	0/0:18,0:18:50.93:0,51,418	0/0:27,0:26:59.51:0,60,473	0/0:12,0:12:19.87:0,20,173	1/1:8,13:21:56.95:570,57,0	1/1:15,10:24:39.91:387,40,0	0/0:9,0:9:11.97:0,12,98	0/0:6,0:6:14.98:0,15,123	0/0:16,0:16:32.95:0,33,271	0/0:14,0:14:32.96:0,33,271	0/0:18,0:18:38.92:0,39,317	0/0:56,0:54:99:0,108,865	0/0:22,0:21:56.93:0,57,468	0/0:12,0:10:26.97:0,27,222	0/0:20,0:20:53.92:0,54,442	0/0:17,0:16:32.54:0,33,257	0/0:9,0:9:14.96:0,15,123	0/0:17,1:18:3.94:0,4,238	0/0:19,0:18:41.62:0,42,330	0/0:29,0:29:68.82:0,69,555	0/0:21,0:21:50.92:0,51,418	0/0:12,0:12:26.94:0,27,218	0/0:11,0:11:32.93:0,33,266
chr10	17231470	.	TA	T	3910.15	PASS	AB=0.933;AC=19;AF=0.339;AN=56;BaseQRankSum=10.368;DP=540;FS=8.717;HRun=10;HaplotypeScore=57.8757;InbreedingCoeff=0.8959;MQ=61.85;MQ0=6;MQRankSum=-1.023;QD=19.07;ReadPosRankSum=1.846;VQSLOD=4.2847;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:84.66:0,85,915	1/1:1,2:3:5.99:52,6,0	0/0:27,0:11:16.91:0,17,133	0/1:13,1:8:13.83:14,0,97	1/1:3,20:23:56.97:492,57,0	0/0:14,0:14:30.08:0,30,332	0/0:20,1:21:31.08:0,31,561	0/0:27,0:27:56.83:0,57,579	0/0:12,0:11:16.67:0,17,182	1/1:7,18:24:65.98:567,66,0	1/1:7,10:16:38.82:325,39,0	0/0:6,0:6:12.03:0,12,130	0/0:6,0:6:15.04:0,15,163	0/0:16,0:16:42.09:0,42,447	1/1:2,15:17:44.99:391,45,0	0/0:17,0:17:51.10:0,51,551	1/1:8,44:49:99:879,102,0	0/0:25,0:24:62.63:0,63,654	0/0:14,0:13:30.08:0,30,332	0/0:21,0:21:57.15:0,57,623	0/0:16,0:15:36.10:0,36,398	0/0:10,0:10:21.06:0,21,232	0/0:18,0:18:42.05:0,42,435	0/0:19,0:18:45.55:0,46,485	0/0:26,1:27:78.19:0,78,852	1/1:1,21:22:57.85:492,58,0	1/1:2,13:15:32.97:282,33,0	1/1:1,16:17:47.99:417,48,0
chr10	17236834	.	ATCTCTCTC	A	1051.56	PASS	AB=0.963;AC=20;AF=0.625;AN=32;BaseQRankSum=0.109;DP=615;FS=0.000;HRun=0;HaplotypeScore=146.1329;InbreedingCoeff=0.0318;MQ=70.34;MQ0=13;MQRankSum=0.219;QD=4.17;ReadPosRankSum=0.356;VQSLOD=2.2653;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:36,0:35:38.40:38,0,141	1/1:13,0:12:3.01:73,3,0	./.	./.	./.	1/1:12,0:12:6.01:89,6,0	./.	./.	0/1:14,0:17:33.12:65,0,33	0/0:31,1:32:0.89:0,1,2	0/0:16,0:16:0:0,0,0	1/1:16,0:16:3.01:37,3,0	0/0:26,0:25:5.91:0,6,55	0/0:20,0:19:1.34:0,1,71	1/1:22,0:23:6.02:145,6,0	1/1:16,0:19:0.94:2,1,0	1/1:16,0:16:8.16:211,8,0	1/1:9,2:10:3.01:59,3,0	./.	./.	./.	./.	./.	0/1:28,0:27:99:128,0,142	./.	0/1:31,0:30:10.89:170,0,11	1/1:17,11:27:6.02:141,6,0	./.
chr10	17238590	.	GGT	G	2653.88	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=10.764;DP=825;FS=3.212;HRun=0;HaplotypeScore=99.9259;InbreedingCoeff=0.9926;MQ=66.44;MQ0=7;MQRankSum=0.200;QD=18.56;ReadPosRankSum=1.806;VQSLOD=3.5020;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:57:99:0,129,2082	0/0:15,0:15:36.11:0,36,563	0/0:42,0:27:17.25:0,17,823	0/0:45,0:28:45.04:0,45,712	0/0:23,0:23:33.11:0,33,541	1/1:8,17:25:48.15:595,48,0	1/1:6,27:33:48.15:593,48,0	0/0:29,1:30:57.19:0,57,905	0/0:29,0:29:69.24:0,69,1116	0/0:28,0:27:51.17:0,51,807	0/0:12,0:12:24.08:0,24,393	0/0:26,0:26:66.23:0,66,1075	0/0:24,0:24:60.17:0,60,952	0/0:37,0:37:87.30:0,87,1420	0/0:38,1:39:71.14:0,71,1624	1/1:5,26:31:59.74:744,60,0	0/0:41,1:42:53.18:0,53,1549	1/1:9,18:29:33.84:566,34,0	0/0:19,0:19:44.60:0,45,648	0/0:23,0:23:45.13:0,45,711	0/0:50,0:48:99:0,99,1547	0/0:21,0:20:24.06:0,24,394	0/0:21,0:21:42.14:0,42,689	0/0:37,0:37:90.31:0,90,1463	1/1:13,12:25:25.33:332,25,0	0/0:34,0:34:42.14:0,42,675	0/0:21,0:21:60.20:0,60,969	0/0:5,0:5:15.03:0,15,221
chr10	17240638	.	TA	T	11437.31	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=20.002;DP=710;FS=7.908;HRun=2;HaplotypeScore=95.3361;InbreedingCoeff=0.9912;MQ=85.96;MQ0=0;MQRankSum=-2.788;QD=36.08;ReadPosRankSum=1.303;VQSLOD=4.9350;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:59,0:59:99:0,172,2562	1/1:0,5:5:9.03:117,9,0	0/0:26,0:26:75.25:0,75,1123	0/0:20,0:20:54.17:0,54,771	1/1:2,27:29:84.26:1076,84,0	0/0:12,0:11:36.12:0,36,540	0/0:33,0:33:99:0,99,1443	1/1:1,22:23:66.16:809,66,0	0/0:32,0:32:87.26:0,87,1248	1/1:0,26:26:75.23:958,75,0	1/1:0,23:23:66.21:857,66,0	0/0:32,0:32:96.33:0,96,1438	0/0:24,0:24:69.23:0,69,1029	0/0:29,0:29:87.29:0,87,1288	1/1:0,32:32:90.29:1169,90,0	0/0:28,0:28:84.28:0,84,1259	1/1:0,38:38:99:1441,111,0	0/0:28,0:28:81.27:0,81,1214	1/1:0,15:15:45.13:569,45,0	1/1:0,20:20:54.18:701,54,0	1/1:0,34:34:93.30:1208,93,0	0/0:11,0:11:30.10:0,30,449	0/0:10,0:10:27.09:0,27,405	0/0:27,0:27:78.25:0,78,1149	0/0:22,0:22:63.20:0,63,924	1/1:3,34:37:99:1286,99,0	1/1:2,26:28:75.24:974,75,0	1/1:0,7:7:21.07:273,21,0
chr10	17241865	.	G	GT	3125.97	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=7.269;DP=512;FS=1.511;HRun=1;HaplotypeScore=81.8861;InbreedingCoeff=0.9931;MQ=96.98;MQ0=0;MQRankSum=-2.869;QD=38.59;ReadPosRankSum=-1.316;VQSLOD=3.6653;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:84.28:0,84,1175	0/0:5,0:5:15.05:0,15,210	0/0:22,0:22:66.17:0,66,864	0/0:28,0:28:80.83:0,81,1027	0/0:15,0:15:42.14:0,42,587	0/0:17,0:17:51.17:0,51,713	0/0:26,0:26:78.26:0,78,1091	1/1:0,15:17:47.97:653,48,0	0/0:17,0:17:51.16:0,51,695	0/0:16,0:16:45.14:0,45,613	0/0:11,0:11:33.11:0,33,461	0/0:19,0:19:57.18:0,57,780	0/0:18,0:18:54.17:0,54,736	0/0:19,0:19:54.17:0,54,738	0/0:17,0:17:51.16:0,51,695	0/0:18,0:18:54.18:0,54,755	0/0:23,0:23:66.22:0,66,923	0/0:11,0:11:33.11:0,33,462	1/1:0,13:13:39.13:589,39,0	1/1:1,19:20:51.12:740,51,0	1/1:1,30:31:87.29:1303,87,0	0/0:6,0:6:18.06:0,18,252	0/0:14,0:14:39.13:0,39,545	0/0:22,0:22:66.22:0,66,923	0/0:19,0:19:57.19:0,57,797	0/0:19,0:19:48.16:0,48,668	0/0:26,0:26:78.26:0,78,1086	0/0:15,0:15:39.13:0,39,545
chr10	17242395	.	GGGGC	G	1249.26	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=7.871;DP=323;FS=18.181;HRun=0;HaplotypeScore=59.1016;InbreedingCoeff=0.8621;MQ=81.44;MQ0=0;MQRankSum=-5.067;QD=19.52;ReadPosRankSum=-3.012;VQSLOD=0.6871;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:51.15:0,51,1217	0/0:9,0:9:18.06:0,18,464	0/0:10,0:10:18.06:0,18,347	0/0:16,0:16:33.11:0,33,741	0/0:8,0:8:24.07:0,24,569	0/0:9,0:9:18.06:0,18,452	0/0:10,0:10:24.08:0,24,605	1/1:9,17:26:45.13:755,45,0	0/0:14,0:14:36.12:0,36,863	0/0:9,0:9:21.06:0,21,495	0/0:2,0:2:3.01:0,3,78	0/0:9,0:9:18.05:0,18,368	0/0:15,0:15:45.14:0,45,1057	0/0:19,0:19:45.15:0,45,1096	0/0:8,0:8:18.06:0,18,441	0/0:8,0:8:24.08:0,24,578	0/0:26,0:26:63.21:0,63,1570	0/0:13,0:13:36.12:0,36,889	1/1:4,5:9:11.84:157,12,0	1/1:2,11:13:24.08:431,24,0	1/1:7,9:16:3.01:54,3,0	0/0:6,0:6:18.06:0,18,467	0/0:7,0:7:12.03:0,12,243	0/0:10,0:10:21.07:0,21,499	0/0:9,0:9:18.06:0,18,468	0/0:9,0:9:18.05:0,18,364	0/0:8,0:8:24.08:0,24,588	0/0:6,0:6:18.06:0,18,449
chr10	17242481	.	AGC	A	1134.18	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=10.603;DP=447;FS=16.253;HRun=0;HaplotypeScore=68.9492;InbreedingCoeff=0.9707;MQ=75.40;MQ0=0;MQRankSum=-10.415;QD=16.68;ReadPosRankSum=-0.711;VQSLOD=2.1866;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,111,2067	0/0:13,0:13:39.13:0,39,752	0/0:15,0:15:45.15:0,45,724	0/0:5,0:5:11.66:0,12,116	0/0:6,0:6:15.05:0,15,280	0/0:14,0:14:42.14:0,42,810	0/0:20,0:20:60.21:0,60,1138	1/1:7,16:23:54.07:526,54,0	0/0:15,0:15:42.14:0,42,784	0/0:14,0:14:36.12:0,36,694	0/0:5,0:5:11.72:0,12,196	0/0:18,0:18:48.16:0,48,925	0/0:21,0:21:60.21:0,60,1145	0/0:24,0:24:66.18:0,66,1234	0/0:19,0:19:54.18:0,54,1019	0/0:16,0:16:48.16:0,48,896	0/0:29,0:29:84.29:0,84,1599	0/0:18,0:18:54.19:0,54,1040	1/1:4,9:13:24.01:237,24,0	1/1:1,10:11:29.92:271,30,0	1/1:8,13:21:29.71:260,30,0	0/0:8,0:8:21.06:0,21,371	0/0:9,0:9:27.09:0,27,518	0/0:23,0:23:69.24:0,69,1325	0/0:11,0:11:31.34:0,31,534	0/0:13,0:13:39.13:0,39,750	0/0:20,0:20:60.17:0,60,1090	0/0:5,0:5:15.05:0,15,289
chr10	17242486	.	CGGG	C	1591.66	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=9.788;DP=455;FS=17.165;HRun=4;HaplotypeScore=75.8769;InbreedingCoeff=0.9638;MQ=75.25;MQ0=0;MQRankSum=-10.484;QD=22.42;ReadPosRankSum=-2.060;VQSLOD=-0.4834;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,105,2126	0/0:16,0:16:48.15:0,48,1024	0/0:14,0:14:42.04:0,42,862	0/0:6,0:6:11.81:0,12,127	0/0:6,0:6:15.03:0,15,287	0/0:15,0:15:45.14:0,45,958	0/0:20,0:20:60.17:0,60,1241	1/1:0,21:21:53.90:589,54,0	0/0:14,0:14:39.13:0,39,884	0/0:14,0:14:35.87:0,36,467	0/0:5,0:5:8.72:0,9,167	0/0:19,0:19:51.17:0,51,1128	0/0:23,0:23:66.19:0,66,1299	0/0:23,0:23:63.21:0,63,1323	0/0:18,0:18:54.17:0,54,1168	0/0:16,0:16:42.13:0,42,948	0/0:29,0:29:84.28:0,84,1912	0/0:19,0:19:57.18:0,57,1303	1/1:4,9:13:34.68:339,35,0	1/1:5,11:16:39:424,39,0	1/1:8,13:21:39.93:399,40,0	0/0:7,0:7:21.06:0,21,448	0/0:10,0:10:27.08:0,27,491	0/0:24,0:24:72.25:0,72,1663	0/0:10,0:10:25.32:0,25,480	0/0:14,0:14:36.07:0,36,553	0/0:18,0:18:54.19:0,54,1253	0/0:5,0:5:15.05:0,15,351
chr10	17242819	.	AC	A	1530.01	PASS	AC=6;AF=0.111;AN=54;BaseQRankSum=9.897;DP=464;FS=14.197;HRun=2;HaplotypeScore=61.9924;InbreedingCoeff=0.9536;MQ=84.81;MQ0=0;MQRankSum=-8.395;QD=27.32;ReadPosRankSum=-2.624;VQSLOD=1.5652;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:93.25:0,93,1343	0/0:9,0:9:27.08:0,27,371	0/0:19,0:19:57.19:0,57,851	0/0:17,0:15:38.04:0,38,618	0/0:7,0:7:15.05:0,15,225	0/0:15,0:15:45.08:0,45,607	0/0:28,0:28:84.27:0,84,1222	1/1:0,23:23:60.20:779,60,0	0/0:18,0:18:51.16:0,51,743	0/0:11,0:11:33.10:0,33,460	0/0:3,0:3:6.02:0,6,90	0/0:16,0:16:48.15:0,48,699	0/0:24,0:24:72.23:0,72,1056	0/0:22,0:22:66.22:0,66,988	0/0:23,0:23:66.21:0,66,967	0/0:17,0:17:51.17:0,51,764	0/0:22,0:22:66.22:0,66,988	0/0:22,0:22:63.19:0,63,905	1/1:3,14:17:45.15:581,45,0	./.	1/1:1,15:16:24.08:311,24,0	0/0:7,0:7:21.07:0,21,313	0/0:10,0:10:27.08:0,27,378	0/0:33,0:33:96.33:0,96,1437	0/0:19,0:19:57.11:0,57,770	0/0:11,0:11:27.08:0,27,385	0/0:17,0:17:51.17:0,51,763	0/0:7,0:7:21.07:0,21,315
chr10	17242843	.	CTA	C	2466.57	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=11.067;DP=632;FS=3.930;HRun=0;HaplotypeScore=84.3187;InbreedingCoeff=0.9960;MQ=81.36;MQ0=0;MQRankSum=-6.926;QD=33.79;ReadPosRankSum=-3.740;VQSLOD=4.8121;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,132,2521	0/0:12,0:12:30.10:0,30,579	0/0:17,0:17:42.13:0,42,760	0/0:22,0:22:34.23:0,34,977	0/0:19,0:19:48.15:0,48,892	0/0:16,0:16:45.15:0,45,869	0/0:35,0:35:99:0,102,1891	1/1:1,22:23:54.18:826,54,0	0/0:26,0:26:75.26:0,75,1440	0/0:27,0:27:78.25:0,78,1405	0/0:13,0:13:27.09:0,27,521	0/0:25,0:25:75.24:0,75,1416	0/0:28,0:28:81.28:0,81,1552	0/0:25,0:25:72.23:0,72,1337	0/0:31,0:31:90.30:0,90,1704	0/0:20,0:20:60.21:0,60,1159	0/0:28,0:28:81.22:0,81,1498	0/0:30,0:30:84.29:0,84,1620	1/1:3,13:16:42.14:624,42,0	1/1:0,11:11:21.07:321,21,0	1/1:0,23:23:57.19:855,57,0	0/0:12,0:12:33.11:0,33,637	0/0:13,0:13:36.10:0,36,659	0/0:33,0:33:99:0,99,1857	0/0:21,0:21:63.22:0,63,1215	0/0:22,0:22:66.23:0,66,1275	0/0:31,0:31:93.32:0,93,1776	0/0:6,0:6:18.06:0,18,347
chr10	17243153	.	C	CCACCTCAAG	6322.16	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-2.376;DP=520;FS=12.029;HRun=0;HaplotypeScore=283.8175;InbreedingCoeff=0.9821;MQ=76.19;MQ0=0;MQRankSum=-8.966;QD=98.78;ReadPosRankSum=-5.413;VQSLOD=2.9052;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,114,3281	0/0:6,0:6:12:0,12,323	0/0:17,0:18:36.66:0,37,1361	0/0:16,0:16:48.16:0,48,1367	0/0:21,0:21:45.11:0,45,1173	0/0:27,0:27:64.51:0,65,2014	0/0:27,0:27:64.98:0,65,1622	1/1:20,8:28:72.25:3073,72,0	0/0:14,0:14:19.12:0,19,991	0/0:25,0:25:70.11:0,70,2007	0/0:12,0:12:30.09:0,30,849	0/0:21,0:21:48.07:0,48,1338	0/0:10,0:10:28.07:0,28,749	0/0:17,0:17:48.06:0,48,1275	0/0:27,0:27:67.11:0,67,2016	0/0:12,0:12:35.33:0,35,965	0/0:22,0:22:29.49:0,29,1634	0/0:13,0:13:33.11:0,33,992	1/1:13,3:16:45.15:1754,45,0	1/1:5,4:10:21.07:783,21,0	1/1:6,2:10:15.05:712,15,0	0/0:12,0:12:36.12:0,36,1063	0/0:10,0:10:30.06:0,30,847	0/0:28,0:27:81.20:0,81,2161	0/0:24,0:24:56.73:0,57,1525	0/0:28,0:28:66:0,66,2023	0/0:18,0:17:54.19:0,54,1580	0/0:7,0:7:21.07:0,21,636
chr10	17243245	.	TTC	T	165.18	PASS	AB=0.833;AC=18;AF=0.600;AN=30;BaseQRankSum=-0.764;DP=40;FS=4.008;HRun=0;HaplotypeScore=17.5764;InbreedingCoeff=0.2501;MQ=118.06;MQ0=0;MQRankSum=0.878;QD=5.51;ReadPosRankSum=-0.708;VQSLOD=1.3517;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:0,3:3:5.55:0,6,26	./.	1/1:6,0:3:2.20:105,2,0	0/1:10,0:5:6.84:7,0,19	0/0:1,0:1:2.88:0,3,15	1/1:1,0:1:3:25,3,0	0/0:0,1:1:2.80:0,3,13	./.	./.	1/1:1,0:1:1.82:5,2,0	0/1:1,1:2:5.31:6,0,5	./.	1/1:0,1:1:1.82:5,2,0	./.	./.	./.	./.	./.	./.	0/0:1,0:1:2.88:0,3,15	./.	0/0:1,0:1:2.84:0,3,14	./.	1/1:0,5:5:2.68:11,3,0	1/1:1,0:1:3:26,3,0	1/1:2,0:2:6:54,6,0	1/1:1,0:1:3:26,3,0	./.
chr10	17243975	.	T	TC	3233.06	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=14.063;DP=660;FS=7.172;HRun=2;HaplotypeScore=82.6106;InbreedingCoeff=0.9992;MQ=82.10;MQ0=0;MQRankSum=-2.597;QD=34.76;ReadPosRankSum=-0.847;VQSLOD=3.3022;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,147,1804	0/0:10,0:10:30.09:0,30,371	0/0:18,0:18:54.15:0,54,633	0/0:21,0:21:55.08:0,55,638	0/0:17,0:17:51.15:0,51,621	0/0:21,0:21:63.20:0,63,781	0/0:25,0:25:75.22:0,75,915	1/1:3,15:18:45.15:647,45,0	0/0:28,0:28:81.25:0,81,993	0/0:29,0:29:84.24:0,84,1026	0/0:17,0:17:51.16:0,51,632	0/0:22,0:22:63.20:0,63,780	0/0:19,0:19:57.15:0,57,678	0/0:38,0:38:99:0,108,1300	0/0:20,0:20:57.18:0,57,705	0/0:22,0:22:60.17:0,60,719	0/0:33,0:33:84.24:0,84,1013	0/0:23,0:23:69.22:0,69,854	1/1:3,18:21:57.18:794,57,0	1/1:0,14:14:36.12:518,36,0	1/1:2,38:40:99:1435,105,0	0/0:26,0:26:75.24:0,75,930	0/0:14,0:14:42.13:0,42,520	0/0:40,0:40:99:0,105,1284	0/0:14,0:14:41.91:0,42,484	0/0:27,0:26:75.24:0,75,929	0/0:24,0:24:72.23:0,72,891	0/0:8,0:8:24.03:0,24,258
chr10	17244088	.	A	ATGTG	3893.67	PASS	AC=24;AF=0.462;AN=52;BaseQRankSum=-1.818;DP=711;FS=6.592;HRun=0;HaplotypeScore=147.3801;InbreedingCoeff=0.8511;MQ=64.76;MQ0=10;MQRankSum=1.677;QD=13.61;ReadPosRankSum=-3.875;VQSLOD=2.2726;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:41:48.05:0,48,592	1/1:4,3:9:8.92:159,9,0	./.	./.	1/1:14,11:29:12.02:261,12,0	0/0:25,0:28:18.06:0,18,390	0/0:25,0:25:23.98:0,24,279	1/1:32,0:30:14.98:245,15,0	0/0:22,0:22:42.14:0,42,651	1/1:21,10:37:0.03:617,0,0	0/0:15,4:21:2.70:0,3,46	0/0:20,0:22:39.02:0,39,457	0/0:27,0:28:57:0,57,739	0/0:35,0:36:51.14:0,51,730	1/1:14,6:21:6.02:141,6,0	0/0:21,0:22:35.66:0,36,597	1/1:10,6:19:23.55:426,24,0	0/0:25,0:25:26.42:0,26,484	1/1:10,1:11:9.03:190,9,0	1/1:13,0:14:6.02:104,6,0	1/1:35,0:34:6.02:83,6,0	0/0:27,0:26:33.04:0,33,403	0/0:21,0:21:39.03:0,39,450	0/0:31,0:32:26.69:0,27,465	0/0:19,0:19:29.98:0,30,411	1/1:20,14:38:63.01:997,63,0	1/1:12,11:28:24.05:457,24,0	1/1:6,5:11:9.03:212,9,0
chr10	17244556	.	GA	G	1661.61	PASS	AB=0.756;AC=35;AF=0.625;AN=56;BaseQRankSum=8.845;DP=514;FS=4.887;HRun=16;HaplotypeScore=94.6736;InbreedingCoeff=0.6666;MQ=58.41;MQ0=10;MQRankSum=4.293;QD=4.72;ReadPosRankSum=5.777;VQSLOD=1.9902;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:41:48.71:0,49,363	1/1:4,3:9:12.68:64,13,0	0/0:8,1:6:8.18:0,8,51	0/0:9,0:6:8.81:0,9,57	0/1:10,6:17:6.66:26,0,7	1/1:12,11:25:18.17:178,18,0	1/1:15,13:24:37.92:201,38,0	1/1:6,0:20:17.32:50,17,0	0/0:16,0:16:27.98:0,28,191	1/1:12,6:18:19.76:96,20,0	1/1:11,3:13:5.08:35,5,0	0/1:12,1:14:3.28:3,0,67	0/0:16,1:17:7.70:0,8,136	0/0:15,0:15:12.91:0,13,166	1/1:12,8:23:31.74:167,32,0	1/1:6,3:21:5.97:71,6,0	1/1:18,11:31:52.15:291,52,0	1/1:14,13:26:20.46:243,20,0	0/1:8,0:13:12.88:14,0,13	1/1:9,0:11:1.87:6,2,0	1/1:12,0:18:8.81:33,9,0	0/0:17,0:20:5.51:0,6,111	0/0:15,0:15:20.63:0,21,147	0/0:17,1:18:8.62:0,9,177	1/1:5,0:5:5.64:29,6,0	1/1:12,6:18:23.41:120,23,0	1/1:6,11:18:22.57:131,23,0	1/1:1,5:11:18.77:101,19,0
chr10	17244971	.	GAA	G	353.75	PASS	AB=0.500;AC=13;AF=0.310;AN=42;BaseQRankSum=2.885;DP=134;FS=0.000;HRun=2;HaplotypeScore=36.0428;InbreedingCoeff=0.7035;MQ=110.48;MQ0=0;MQRankSum=-3.945;QD=14.74;ReadPosRankSum=0.827;VQSLOD=0.7457;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:16.80:0,17,174	./.	0/0:18,0:12:29.62:0,30,369	0/0:18,0:13:18.79:0,19,324	0/1:0,2:2:0:0,0,0	./.	1/1:0,1:1:3.01:37,3,0	0/0:7,0:7:15:0,15,172	0/0:5,0:5:11.15:0,11,104	./.	./.	0/0:5,0:5:11.98:0,12,149	0/0:7,0:7:21.07:0,21,312	0/0:12,0:12:33.06:0,33,435	1/1:2,3:5:14.26:155,14,0	1/1:1,2:3:3.01:37,3,0	1/1:6,0:5:10.73:90,11,0	./.	0/0:3,0:3:9.01:0,9,103	0/0:8,0:8:16.38:0,16,158	0/0:4,0:4:3.44:0,3,21	0/0:2,0:2:5.81:0,6,59	0/0:1,0:1:3.01:0,3,45	0/0:10,0:10:27.05:0,27,374	./.	./.	1/1:4,2:6:15.75:139,16,0	1/1:1,0:1:3.01:39,3,0
chr10	17245041	.	AG	A	1354.81	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=8.375;DP=347;FS=16.045;HRun=3;HaplotypeScore=49.8115;InbreedingCoeff=0.9329;MQ=94.01;MQ0=0;MQRankSum=-6.364;QD=29.45;ReadPosRankSum=-1.265;VQSLOD=1.5570;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:81.27:0,81,1166	0/0:9,0:9:27.09:0,27,382	0/0:17,0:17:18.24:0,18,624	0/0:19,0:19:47.99:0,48,653	0/0:11,0:11:33.11:0,33,474	0/0:12,0:12:36.12:0,36,518	0/0:19,0:19:54.18:0,54,778	1/1:0,13:13:39.12:468,39,0	0/0:9,0:9:27.09:0,27,389	0/0:2,0:2:6.02:0,6,86	0/0:4,0:4:12.04:0,12,169	0/0:16,0:16:45.15:0,45,648	0/0:20,0:20:57.18:0,57,800	0/0:9,0:9:27.09:0,27,389	0/0:11,0:11:30.09:0,30,413	0/0:7,0:7:21.07:0,21,302	0/0:15,0:15:45.12:0,45,627	0/0:13,0:13:39.13:0,39,562	1/1:2,4:6:9.03:108,9,0	1/1:2,13:15:42.13:503,42,0	1/1:0,12:12:36.11:431,36,0	0/0:10,0:10:30.09:0,30,416	0/0:6,0:6:15.05:0,15,215	0/0:27,0:27:78.25:0,78,1106	0/0:5,0:5:15.05:0,15,216	0/0:10,0:10:27.09:0,27,389	0/0:15,0:15:45.15:0,45,647	0/0:8,0:8:21.07:0,21,302
chr10	17245106	.	G	GCCTTGAGCGCT	6376.40	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-0.362;DP=447;FS=0.603;HRun=0;HaplotypeScore=139.5764;InbreedingCoeff=0.9836;MQ=93.03;MQ0=0;MQRankSum=-9.048;QD=106.27;ReadPosRankSum=-4.421;VQSLOD=4.1402;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,132,4453	0/0:12,0:12:30.10:0,30,936	0/0:24,0:24:62.95:0,63,1850	0/0:18,0:18:28.49:0,28,868	0/0:21,0:21:57.20:0,57,1977	0/0:17,0:17:42.14:0,42,1384	0/0:15,0:15:36.12:0,36,1171	1/1:12,5:19:45.15:1825,45,0	0/0:10,0:10:27.09:0,27,937	0/0:15,0:15:42.14:0,42,1403	0/0:4,0:4:12.04:0,12,402	0/0:13,0:13:39.12:0,39,1189	0/0:21,0:21:57.20:0,57,1898	0/0:11,0:11:30.10:0,30,1010	0/0:14,0:14:42.14:0,42,1442	0/0:7,0:7:18.06:0,18,624	0/0:26,0:26:72.25:0,72,2497	0/0:22,0:22:51.18:0,51,1770	1/1:7,3:10:24.08:1121,24,0	1/1:9,8:18:39.13:2137,39,0	1/1:7,5:13:27.08:1293,27,0	0/0:11,0:11:33.11:0,33,1051	0/0:8,0:8:24.08:0,24,832	0/0:25,0:25:69.22:0,69,2313	0/0:8,0:8:21.07:0,21,729	0/0:16,0:16:45.15:0,45,1434	0/0:17,0:17:48.15:0,48,1547	0/0:6,0:6:18.06:0,18,568
chr10	17247471	.	G	GT	2856.64	PASS	AB=0.593;AC=15;AF=0.268;AN=56;BaseQRankSum=-2.906;DP=513;FS=5.861;HRun=11;HaplotypeScore=79.0249;InbreedingCoeff=0.7059;MQ=74.58;MQ0=0;MQRankSum=0.567;QD=17.42;ReadPosRankSum=2.109;VQSLOD=4.7526;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,1:31:52.28:0,52,579	1/1:2,11:13:30.06:305,30,0	0/0:24,0:21:21.67:0,22,125	0/0:5,0:5:2.94:0,3,23	1/1:6,17:23:33.55:493,34,0	0/0:25,2:27:4.89:0,5,403	0/0:14,0:14:32.87:0,33,255	0/0:14,0:42:52.24:0,52,154	0/0:13,0:14:36.95:0,37,267	1/1:3,8:11:24.02:230,24,0	0/1:4,14:18:7.47:274,0,7	0/0:10,0:10:23.91:0,24,186	0/0:10,0:11:28.93:0,29,215	0/0:11,0:11:26.84:0,27,203	0/1:1,9:11:7.06:105,0,7	0/0:13,0:13:29.88:0,30,232	1/1:9,19:30:33.55:492,34,0	0/0:15,0:20:44.88:0,45,310	0/0:9,0:24:9.88:0,10,79	0/0:4,0:21:32.41:0,32,93	0/0:4,0:16:24.43:0,24,71	0/0:12,0:14:27.95:0,28,197	0/0:20,0:21:55.83:0,56,424	0/0:11,0:12:31.92:0,32,238	0/0:18,0:18:44.81:0,45,348	1/1:6,16:22:27.21:427,27,0	1/1:5,14:19:51.08:510,51,0	0/1:8,8:16:16.41:214,0,16
chr10	17247574	.	C	CACACTAGCCCGTCCTTGGAG	55918.44	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=4.997;DP=539;FS=5.550;HRun=0;HaplotypeScore=256.6377;InbreedingCoeff=0.9978;MQ=84.35;MQ0=0;MQRankSum=-16.703;QD=156.20;ReadPosRankSum=-0.723;VQSLOD=3.8929;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:63.22:0,63,2908	1/1:6,2:8:21.07:1580,21,0	0/0:22,0:22:60.17:0,60,2288	0/0:23,0:23:57.19:0,57,2158	1/1:18,2:24:42.14:1502,42,0	1/1:19,3:24:54.19:4515,54,0	1/1:19,4:26:63.22:4620,63,0	1/1:37,0:37:99:6367,105,0	0/0:18,0:18:54.19:0,54,2633	1/1:22,1:23:63.22:4032,63,0	1/1:17,1:19:39.13:1791,39,0	0/0:17,0:17:51.18:0,51,2594	0/0:16,0:16:48.16:0,48,2590	0/0:10,0:10:27.09:0,27,1290	1/1:8,4:13:36.12:2722,36,0	1/1:9,4:19:30.10:2775,30,0	1/1:17,4:23:45.15:3348,45,0	1/1:14,0:14:33.11:2067,33,0	1/1:12,0:12:33.10:1612,33,0	1/1:18,2:22:54.19:3376,54,0	1/1:17,1:23:20.87:1740,21,0	0/0:10,0:10:24.08:0,24,1185	0/0:16,0:16:45.10:0,45,1869	0/0:27,0:27:66.23:0,66,3414	1/1:12,0:14:39.11:2210,39,0	1/1:13,0:13:36.12:2731,36,0	1/1:17,12:35:87.13:6846,87,0	1/1:1,6:9:24.08:2085,24,0
chr10	17249368	.	TCTAGGATGG	T	17466.16	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=16.461;DP=591;FS=2.373;HRun=0;HaplotypeScore=179.7403;InbreedingCoeff=0.9951;MQ=73.63;MQ0=0;MQRankSum=-17.415;QD=64.93;ReadPosRankSum=4.592;VQSLOD=4.9823;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:90.29:0,90,3998	1/1:1,8:9:12.04:357,12,0	0/0:15,0:15:45.15:0,45,1918	0/0:16,0:16:35.43:0,35,1105	1/1:0,19:19:30.10:930,30,0	1/1:1,12:13:27.09:783,27,0	1/1:0,26:26:51.18:1500,51,0	0/0:30,0:30:78.26:0,78,3362	0/0:24,0:24:72.23:0,72,3274	1/1:3,24:27:60.21:1793,60,0	1/1:1,16:17:29.83:905,30,0	0/0:20,0:20:60.18:0,60,2619	0/0:18,0:18:54.19:0,54,2497	0/0:27,0:27:75.24:0,75,3337	1/1:1,23:24:54.19:1609,54,0	1/1:1,22:23:54.13:1555,54,0	1/1:0,21:21:42.14:1275,42,0	1/1:0,11:11:24.08:708,24,0	0/0:21,0:21:51.14:0,51,1929	0/0:13,0:13:34.50:0,35,1621	0/0:40,0:40:99:0,114,5231	0/0:29,0:29:75.26:0,75,3251	0/0:12,0:12:36.11:0,36,1434	0/0:26,0:26:78.21:0,78,3479	1/1:0,15:15:33.07:950,33,0	1/1:0,24:24:72.23:2146,72,0	1/1:1,23:24:57.20:1746,57,0	1/1:2,14:16:39.13:1209,39,0
chr10	17250257	.	AGG	A	4420.47	PASS	AC=34;AF=0.630;AN=54;BaseQRankSum=-5.830;DP=549;FS=0.000;HRun=4;HaplotypeScore=84.0279;InbreedingCoeff=0.9682;MQ=62.39;MQ0=20;MQRankSum=-0.010;QD=13.90;ReadPosRankSum=2.511;VQSLOD=1.3018;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:25:52.10:0,52,433	1/1:9,0:8:14.92:112,15,0	0/0:31,0:17:34.19:0,34,358	0/0:35,0:15:31.96:0,32,258	./.	1/1:28,0:26:43.19:379,43,0	1/1:30,0:28:45.41:417,45,0	1/1:36,0:34:62.86:563,63,0	0/0:23,0:23:25.08:0,25,301	1/1:7,8:13:23.86:191,24,0	1/1:16,0:16:20.79:149,21,0	0/0:20,0:19:42.36:0,42,375	0/0:13,0:11:20.85:0,21,158	0/0:19,0:17:30.58:0,31,276	1/1:18,0:18:35.76:290,36,0	1/1:15,0:14:6.87:203,7,0	1/1:18,0:18:15.36:176,15,0	1/1:16,0:16:25.90:200,26,0	1/1:18,0:17:38.56:323,39,0	1/1:7,0:7:17.92:141,18,0	1/1:23,0:22:10.30:287,10,0	0/0:13,0:13:19.65:0,20,129	0/0:11,0:11:19.82:0,20,166	0/0:22,0:22:43.48:0,43,375	1/1:16,0:16:20.53:155,21,0	1/1:25,0:24:37.71:347,38,0	1/1:10,0:9:18.78:139,19,0	1/1:18,0:18:44.78:350,45,0
chr10	17250739	.	T	TATCC	4118.03	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=-6.608;DP=781;FS=2.056;HRun=0;HaplotypeScore=123.3625;InbreedingCoeff=0.4070;MQ=67.09;MQ0=11;MQRankSum=2.702;QD=11.90;ReadPosRankSum=1.951;VQSLOD=3.1253;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,111,1225	0/1:7,0:7:16.08:16,0,22	0/0:33,0:15:10.70:0,11,111	0/0:38,0:20:11.99:0,12,119	0/1:29,0:29:72.40:249,0,72	0/0:18,0:18:42.31:0,42,344	0/0:38,0:38:62.62:0,63,505	1/1:37,0:34:56.89:482,57,0	0/0:23,0:23:32.96:0,33,321	0/1:28,0:28:52.09:293,0,52	0/1:12,0:12:12.84:169,0,13	0/0:33,0:33:66.08:0,66,756	0/0:25,0:25:60.03:0,60,652	0/0:40,0:40:86.82:0,87,881	1/1:21,0:21:4.32:234,4,0	0/0:22,0:22:33.05:0,33,339	0/1:49,0:49:99:431,0,149	0/0:17,0:17:41.94:0,42,358	1/1:7,16:21:47.90:730,48,0	1/1:2,13:16:23.67:253,24,0	1/1:11,41:54:18.06:438,18,0	0/0:22,0:22:42.04:0,42,439	0/0:22,0:21:36.02:0,36,375	0/0:41,0:41:73.14:0,73,903	0/0:15,0:15:23.95:0,24,219	0/1:40,0:38:25.41:459,0,25	0/1:21,0:21:35.78:267,0,36	1/1:6,0:6:11.97:97,12,0
chr10	17250760	.	ATCCTTCCTTCCT	A	2079.06	PASS	AC=10;AF=0.192;AN=52;BaseQRankSum=3.133;DP=744;FS=3.324;HRun=0;HaplotypeScore=227.7486;InbreedingCoeff=0.9105;MQ=55.54;MQ0=19;MQRankSum=-5.059;QD=17.33;ReadPosRankSum=-2.240;VQSLOD=2.2213;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:48:84.26:0,84,3380	0/0:7,0:7:5.51:0,6,488	./.	./.	0/0:31,0:31:47.19:0,47,2181	1/1:9,15:24:17.98:395,18,0	1/1:35,0:35:15.49:487,15,0	0/0:37,0:27:9:0,9,164	0/0:16,0:16:30.10:0,30,1307	0/0:26,0:26:39.13:0,39,1365	0/0:11,0:11:12.04:0,12,532	0/0:29,0:28:48.15:0,48,2065	0/0:27,0:27:45.15:0,45,1887	0/0:32,0:32:39.13:0,39,1715	0/0:17,0:17:21.05:0,21,602	1/1:7,14:21:15.05:515,15,0	0/0:47,0:47:72.20:0,72,2646	1/1:21,1:22:21.55:477,22,0	0/0:32,0:22:37.37:0,37,1775	0/0:16,0:15:24.08:0,24,982	0/0:58,0:54:51.18:0,51,2127	0/0:17,0:17:27.08:0,27,1104	0/0:16,0:15:24.08:0,24,1039	0/0:45,0:46:75.26:0,75,2888	1/1:5,13:18:12.04:369,12,0	0/0:39,0:36:53.09:0,53,1690	0/0:26,0:26:54.12:0,54,1263	0/0:4,0:4:6.02:0,6,183
chr10	17251147	.	A	AAGCACTGTG	1648.40	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=4.169;DP=806;FS=0.819;HRun=0;HaplotypeScore=225.8229;InbreedingCoeff=0.9395;MQ=72.51;MQ0=1;MQRankSum=-6.380;QD=16.99;ReadPosRankSum=-2.821;VQSLOD=2.1168;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:78.25:0,78,2041	0/0:12,0:12:24.08:0,24,660	0/0:34,0:32:20.96:0,21,390	0/0:24,0:24:15.05:0,15,335	0/0:28,0:28:63.15:0,63,1526	0/0:22,0:22:39.12:0,39,1018	0/0:37,0:37:72.25:0,72,1974	1/1:18,0:18:15.05:421,15,0	0/0:41,0:41:90.31:0,90,2410	0/0:30,0:30:57.20:0,57,1553	0/0:10,0:10:9.03:0,9,249	0/0:34,0:34:72.23:0,72,1916	0/0:35,0:35:72.25:0,72,1982	0/0:50,0:50:99:0,129,3480	0/0:49,0:49:99:0,117,3012	0/0:23,0:23:60.16:0,60,1531	0/0:47,0:47:96.32:0,96,2501	0/0:24,0:24:57.19:0,57,1524	1/1:19,0:18:27.07:574,27,0	1/1:7,7:14:6.02:262,6,0	1/1:46,0:45:18.06:543,18,0	0/0:22,0:21:39.08:0,39,918	0/0:14,0:14:27.09:0,27,745	0/0:45,0:45:99:0,102,2722	0/0:24,0:24:45.15:0,45,1240	0/0:38,0:38:75.26:0,75,2027	0/0:23,0:23:54.19:0,54,1428	0/0:8,0:8:21.07:0,21,581
chr10	17251177	.	CGAGG	C	603.44	PASS	AB=0.818;AC=4;AF=0.071;AN=56;BaseQRankSum=6.997;DP=846;FS=0.851;HRun=0;HaplotypeScore=145.6030;InbreedingCoeff=-0.0781;MQ=67.36;MQ0=1;MQRankSum=-4.829;QD=4.61;ReadPosRankSum=-4.515;VQSLOD=1.0926;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,105,2746	0/0:11,0:11:33.10:0,33,894	0/0:29,0:25:41.25:0,41,1065	0/1:32,1:28:45.15:45,0,976	0/0:29,0:29:84.25:0,84,2246	0/0:18,0:18:54.17:0,54,1499	0/0:42,0:42:99:0,123,3373	0/1:20,5:25:99:226,0,1513	0/0:42,0:42:99:0,126,3536	0/0:33,0:33:99:0,99,2721	0/0:10,0:10:27.08:0,27,692	0/0:38,0:38:99:0,114,3296	0/0:38,0:38:99:0,111,3127	0/0:52,0:52:99:0,157,4364	0/0:59,0:59:99:0,178,4690	0/0:24,0:24:72.19:0,72,1861	0/0:45,0:45:99:0,132,3708	0/0:26,0:26:75.26:0,75,2169	0/1:11,8:19:99:395,0,719	0/0:9,0:9:12.46:0,12,280	0/1:39,14:52:46.50:47,0,1639	0/0:22,0:21:63.12:0,63,1585	0/0:12,0:12:36.11:0,36,973	0/0:47,0:47:99:0,141,3930	0/0:26,0:26:66.23:0,66,1908	0/0:34,0:34:99:0,102,2782	0/0:22,0:22:66.23:0,66,1834	0/0:11,0:11:33.11:0,33,941
chr10	17252848	.	TTC	T	8426.78	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=14.946;DP=623;FS=2.260;HRun=0;HaplotypeScore=78.0012;InbreedingCoeff=0.9834;MQ=68.46;MQ0=2;MQRankSum=0.082;QD=37.79;ReadPosRankSum=4.123;VQSLOD=7.1507;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:90.31:0,90,1615	1/1:2,9:11:27.04:363,27,0	0/0:23,0:13:33.03:0,33,504	0/0:27,0:18:35.90:0,36,580	1/1:1,35:36:99:1456,105,0	0/0:30,0:30:90.29:0,90,1605	0/0:16,0:16:45.15:0,45,824	0/0:36,0:36:90.29:0,90,1576	0/0:19,0:19:54.17:0,54,958	1/1:0,29:29:86.64:1189,87,0	1/1:0,20:20:51.17:730,51,0	0/0:19,0:19:54.19:0,54,983	0/0:22,0:22:66.23:0,66,1209	0/0:14,0:14:42.14:0,42,760	1/1:2,18:20:48.16:688,48,0	0/0:17,0:17:45.15:0,45,813	1/1:1,36:37:96.32:1375,96,0	0/0:18,0:18:51.17:0,51,917	0/0:30,0:30:54.52:0,55,1312	0/0:25,0:25:69.17:0,69,1215	0/0:3,0:3:6.02:0,6,110	0/0:16,0:16:45.09:0,45,740	0/0:19,0:19:51.17:0,51,922	0/0:17,0:17:28.71:0,29,757	0/0:18,0:18:51.17:0,51,932	1/1:1,25:26:75.23:1041,75,0	1/1:0,26:26:69.23:988,69,0	1/1:1,17:18:38.65:596,39,0
chr10	17253039	.	C	CT	1804.82	PASS	AB=0.745;AC=10;AF=0.179;AN=56;BaseQRankSum=-8.669;DP=601;FS=0.000;HRun=10;HaplotypeScore=79.7647;InbreedingCoeff=0.7461;MQ=81.91;MQ0=2;MQRankSum=-0.571;QD=15.04;ReadPosRankSum=0.378;VQSLOD=3.8419;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:37:88.64:0,89,698	0/0:10,0:10:20.97:0,21,172	0/0:44,1:34:25.24:0,25,284	0/0:45,0:28:30.35:0,30,208	0/0:18,0:18:53.92:0,54,440	0/1:3,14:17:10.18:312,0,10	1/1:4,17:21:20.48:423,20,0	0/0:5,0:23:32.79:0,33,97	0/0:10,0:12:19.05:0,19,135	0/0:19,0:19:44.90:0,45,363	0/1:15,1:16:2.07:2,0,188	0/0:20,0:20:47.94:0,48,394	0/0:24,0:24:58.42:0,58,466	0/0:20,0:21:58.94:0,59,469	0/0:17,0:17:38.95:0,39,320	1/1:3,12:16:29.87:290,30,0	0/0:25,0:25:59.56:0,60,479	1/1:5,27:33:31.77:701,32,0	0/0:4,0:25:41.21:0,41,119	0/0:1,0:18:32.59:0,33,94	0/0:3,0:16:16.29:0,16,47	0/0:8,0:8:14.98:0,15,123	0/0:14,0:14:29.94:0,30,246	0/0:20,0:24:65.04:0,65,484	1/1:5,12:17:2.43:231,2,0	0/0:25,0:25:50.87:0,51,419	0/0:20,0:21:49.93:0,50,395	0/0:12,0:12:23.76:0,24,197
chr10	17253203	.	CT	C	1972.54	PASS	AB=0.678;AC=16;AF=0.286;AN=56;BaseQRankSum=-2.342;DP=559;FS=13.333;HRun=14;HaplotypeScore=71.4173;InbreedingCoeff=0.7240;MQ=62.88;MQ0=13;MQRankSum=3.398;QD=9.91;ReadPosRankSum=2.201;VQSLOD=1.8098;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,1:37:68.02:0,68,731	1/1:2,8:10:11.82:82,12,0	0/0:21,0:10:8.99:0,9,76	0/0:14,0:9:8.98:0,9,74	1/1:9,21:29:36.66:389,37,0	0/0:3,0:20:9.77:0,10,46	0/0:11,0:13:19.98:0,20,118	0/0:30,0:31:39.60:0,40,244	0/0:9,0:8:21.01:0,21,191	1/1:9,10:19:29.64:205,30,0	1/1:9,17:26:7.43:244,7,0	0/0:11,0:11:22.71:0,23,176	0/0:13,0:13:19.89:0,20,158	0/0:24,0:23:53.53:0,54,474	1/1:1,8:10:25.84:170,26,0	0/0:4,0:15:8.16:0,8,39	1/1:13,35:51:99:681,103,0	0/0:19,0:28:36.47:0,36,179	0/0:12,0:14:3.13:0,3,147	0/0:21,0:20:37.23:0,37,324	0/0:9,0:9:6.01:0,6,55	0/0:13,0:13:21.91:0,22,197	0/0:25,0:26:61.82:0,62,522	0/0:13,0:14:30.03:0,30,278	0/0:5,0:19:20.84:0,21,106	0/1:14,5:19:33.34:47,0,33	1/1:7,12:19:35.43:246,35,0	0/1:3,8:13:29.83:103,0,30
chr10	17255074	.	GC	G	18305.91	PASS	AB=0.769;AC=55;AF=0.982;AN=56;BaseQRankSum=-2.440;DP=633;FS=6.590;HRun=5;HaplotypeScore=61.7374;InbreedingCoeff=-0.0166;MQ=71.48;MQ0=0;MQRankSum=-2.400;QD=28.92;ReadPosRankSum=2.377;VQSLOD=5.2971;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,34:35:96.27:1088,96,0	1/1:0,5:5:9.03:102,9,0	1/1:2,4:6:12.03:127,12,0	0/1:7,3:10:4.58:76,0,5	1/1:3,15:18:36.10:408,36,0	1/1:0,16:16:45.13:510,45,0	1/1:2,26:28:72.20:816,72,0	1/1:1,21:22:60.17:680,60,0	1/1:0,26:26:63.18:714,63,0	1/1:0,17:17:51.13:568,51,0	1/1:1,13:14:36.10:408,36,0	1/1:2,30:32:81.23:917,81,0	1/1:1,18:19:48.14:544,48,0	1/1:1,32:33:84.24:952,84,0	1/1:0,28:28:78.22:884,78,0	1/1:1,26:27:66.19:747,66,0	1/1:2,37:39:99:1224,108,0	1/1:0,31:31:72.21:816,72,0	1/1:1,12:13:36.09:399,36,0	1/1:1,12:13:36.10:408,36,0	1/1:2,60:62:99:1767,156,0	1/1:0,19:19:48.14:544,48,0	1/1:0,14:14:39.11:442,39,0	1/1:1,40:41:99:1259,111,0	1/1:0,17:17:45.13:510,45,0	1/1:0,19:19:54.14:604,54,0	1/1:0,15:15:35.69:384,36,0	1/1:0,14:14:36.10:408,36,0
chr10	17256074	.	AAC	A	1253.68	PASS	AB=1.000;AC=22;AF=0.500;AN=44;BaseQRankSum=-1.467;DP=527;FS=0.000;HRun=0;HaplotypeScore=106.0985;InbreedingCoeff=0.5642;MQ=62.57;MQ0=14;MQRankSum=5.936;QD=4.70;ReadPosRankSum=2.616;VQSLOD=2.5895;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:20,21:40:26.79:286,27,0	./.	0/0:32,0:16:10.23:0,10,119	0/0:51,0:31:3.01:0,3,46	./.	./.	1/1:27,0:33:9.51:42,10,0	0/0:13,0:13:6.11:0,6,68	1/1:12,0:12:5.68:28,6,0	0/0:17,0:18:14.66:0,15,87	./.	1/1:15,3:18:11.87:116,12,0	1/1:13,0:15:11.61:79,12,0	1/1:15,4:18:12.01:120,12,0	0/1:16,0:16:0:0,0,0	1/1:11,0:14:2.84:14,3,0	0/0:20,0:20:16.19:0,16,111	0/1:10,0:9:18.96:23,0,19	0/0:10,0:9:2.13:0,2,5	./.	0/0:17,0:15:0.47:0,0,1	1/1:17,5:19:3:34,3,0	1/1:8,9:14:6.02:65,6,0	1/1:25,12:37:59.36:598,59,0	./.	0/0:18,0:15:4.70:0,5,28	0/0:13,0:13:7.01:0,7,41	0/0:6,0:5:3.01:0,3,36
chr10	17256106	.	CGT	C	1392.71	PASS	AB=0.870;AC=21;AF=0.404;AN=52;BaseQRankSum=1.920;DP=605;FS=55.078;HRun=0;HaplotypeScore=129.3847;InbreedingCoeff=0.1222;MQ=35.12;MQ0=32;MQRankSum=-6.574;QD=5.20;ReadPosRankSum=-3.983;VQSLOD=0.0012;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,1:49:58.93:0,59,607	0/1:7,0:7:0:0,0,0	0/0:23,0:6:9.47:0,9,86	0/0:40,0:9:14.51:0,15,214	0/0:11,1:10:1.44:0,1,6	0/0:19,0:17:12.04:0,12,168	0/1:43,2:36:26.24:26,0,216	1/1:4,7:11:22.89:286,23,0	0/1:15,0:13:1.98:2,0,152	0/1:13,2:15:75.70:258,0,76	0/1:7,0:6:0:0,0,0	0/0:29,0:28:6.69:0,7,393	0/1:22,1:20:28.30:28,0,342	0/0:31,2:29:29.74:0,30,345	1/1:17,1:15:6:60,6,0	0/0:19,0:17:6.17:0,6,46	1/1:16,2:18:32.51:286,33,0	0/1:11,2:9:31.74:32,0,91	0/1:6,0:2:12.81:33,0,13	./.	./.	0/1:16,15:25:16.01:16,0,96	0/0:19,3:18:1.02:0,1,183	0/0:53,2:51:1.89:0,2,493	0/1:15,5:17:39.77:48,0,40	1/1:12,5:13:1.72:332,2,0	1/1:9,0:7:9.20:105,9,0	0/1:1,2:2:0.24:32,0,0
chr10	17256107	.	GTA	G	590.69	PASS	AB=0.941;AC=21;AF=0.404;AN=52;BaseQRankSum=3.492;DP=601;FS=26.132;HRun=0;HaplotypeScore=133.2452;InbreedingCoeff=0.3275;MQ=35.25;MQ0=31;MQRankSum=-8.015;QD=2.43;ReadPosRankSum=-4.367;VQSLOD=-0.5340;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:53,2:50:68.83:0,69,1031	0/1:6,0:6:0:0,0,0	0/0:22,0:6:8.64:0,9,105	0/0:39,0:9:26.50:0,27,290	0/0:9,1:9:2.37:0,2,8	0/0:17,2:17:11.99:0,12,200	0/1:47,1:36:15.14:15,0,298	1/1:11,0:11:8.45:125,8,0	0/0:18,0:14:17.19:0,17,274	0/1:13,1:14:37.51:107,0,38	0/1:6,1:6:0.02:0,0,0	0/0:29,1:28:33.24:0,33,574	0/0:22,1:21:3.88:0,4,509	0/0:36,0:30:29.69:0,30,366	1/1:17,2:15:5.69:31,6,0	0/1:20,0:16:3.39:3,0,67	1/1:17,1:17:15.36:117,15,0	0/1:11,1:9:5.85:6,0,134	0/1:5,1:2:13.19:14,0,13	./.	./.	0/1:33,0:25:0.68:1,0,128	0/0:24,0:19:15.03:0,15,266	0/0:57,1:51:69.49:0,69,1007	0/1:17,2:16:24.85:25,0,54	1/1:17,1:13:18.16:228,18,0	1/1:8,0:7:7.52:60,8,0	1/1:3,0:2:2.94:18,3,0
chr10	17256111	.	A	ACG	127.77	PASS	AB=0.963;AC=7;AF=0.140;AN=50;BaseQRankSum=3.920;DP=612;FS=0.000;HRun=0;HaplotypeScore=141.3662;InbreedingCoeff=0.4205;MQ=34.85;MQ0=33;MQRankSum=-4.562;QD=1.85;ReadPosRankSum=-2.132;VQSLOD=2.0356;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:51:69.17:0,69,964	./.	0/0:21,0:5:12.01:0,12,156	0/0:41,0:9:22.89:0,23,297	0/0:12,0:10:0.94:0,1,2	0/0:20,0:17:11.87:0,12,157	0/0:50,0:38:30.75:0,31,358	0/0:12,0:11:22.98:0,23,145	0/0:19,0:16:24.01:0,24,296	0/0:15,0:15:2.02:0,2,117	0/1:7,0:6:0:0,0,0	0/0:29,0:27:45.45:0,45,626	0/0:24,0:21:36.17:0,36,517	0/0:39,0:33:36.03:0,36,483	1/1:18,0:14:2.13:10,2,0	0/0:20,0:15:8.86:0,9,108	1/1:14,4:17:22.29:198,22,0	0/0:10,0:7:9.27:0,9,138	0/0:7,0:2:5.92:0,6,39	./.	./.	0/0:36,0:28:17.58:0,18,183	0/0:23,0:18:14.63:0,15,208	0/0:57,0:50:84.19:0,84,1168	0/0:19,0:16:5.32:0,5,58	0/1:18,0:13:6.42:6,0,106	0/1:7,1:6:7.28:26,0,7	0/0:3,0:2:2.96:0,3,19
chr10	17256121	.	ACACGCG	A	324.20	PASS	AB=0.983;AC=15;AF=0.288;AN=52;BaseQRankSum=6.433;DP=560;FS=17.598;HRun=0;HaplotypeScore=144.3714;InbreedingCoeff=-0.0552;MQ=34.83;MQ0=34;MQRankSum=-7.382;QD=1.49;ReadPosRankSum=-2.564;VQSLOD=1.2653;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:48,1:43:62.91:0,63,2163	0/1:7,0:6:0:0,0,0	0/0:17,0:3:9.03:0,9,278	0/0:35,0:8:24.08:0,24,558	0/0:11,0:9:2.94:0,3,19	0/0:21,0:19:8.66:0,9,323	0/1:46,5:39:93.79:94,0,537	0/0:5,0:4:0.47:0,0,1	0/1:18,1:16:3.77:4,0,635	0/1:10,0:10:43.85:44,0,122	0/1:5,0:4:0:0,0,0	0/0:33,0:29:24.77:0,25,1145	0/0:23,0:20:4.05:0,4,903	0/0:37,0:30:2.17:0,2,844	1/1:17,0:13:2.99:24,3,0	0/0:19,0:14:11.73:0,12,210	0/1:15,0:13:29.73:42,0,30	0/1:8,0:5:57.98:58,0,170	1/1:7,0:2:2.52:40,3,0	./.	./.	0/1:36,0:29:41.54:42,0,340	0/0:21,0:16:11.90:0,12,439	0/0:53,0:47:78.16:0,78,2495	0/1:19,0:14:23.21:23,0,88	0/1:16,0:10:46.33:80,0,46	0/1:7,0:6:6.71:7,0,64	0/0:1,0:1:2.90:0,3,16
chr10	17256123	.	ACGCGCG	A	472.89	PASS	AB=0.950;AC=17;AF=0.327;AN=52;BaseQRankSum=6.621;DP=550;FS=19.277;HRun=0;HaplotypeScore=141.6780;InbreedingCoeff=0.0678;MQ=34.75;MQ0=35;MQRankSum=-7.297;QD=2.05;ReadPosRankSum=-2.663;VQSLOD=0.9413;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:41:62.91:0,63,2076	0/1:7,0:6:0:0,0,0	0/0:20,0:3:9.03:0,9,240	0/0:36,0:8:23.97:0,24,447	0/0:11,0:9:2.75:0,3,18	0/0:20,0:19:8.60:0,9,317	0/1:46,0:38:93.07:93,0,616	0/1:5,0:4:0:0,0,0	0/1:21,0:17:0.03:0,0,676	0/1:10,0:11:54.15:54,0,101	0/1:4,0:4:0:0,0,0	0/0:31,0:28:11.38:0,11,1155	0/1:23,0:20:10.70:11,0,914	0/0:38,0:30:14.55:0,15,1161	1/1:13,0:12:3:27,3,0	0/0:18,0:13:1.59:0,2,192	1/1:12,1:12:7.44:99,7,0	0/1:7,1:5:99:106,0,179	1/1:5,1:2:5.23:68,5,0	./.	./.	0/1:33,1:29:12.55:13,0,395	0/0:19,0:16:11.90:0,12,439	0/0:51,0:46:78.02:0,78,2463	0/1:20,0:14:48.63:49,0,64	0/1:11,0:6:61.77:89,0,62	0/0:7,0:6:4.18:0,4,65	0/0:1,0:1:2.50:0,2,9
chr10	17256139	.	ACACG	A	156.65	PASS	AB=0.994;AC=15;AF=0.300;AN=50;BaseQRankSum=2.657;DP=549;FS=26.849;HRun=0;HaplotypeScore=139.8354;InbreedingCoeff=0.1629;MQ=33.50;MQ0=39;MQRankSum=-5.799;QD=0.80;ReadPosRankSum=-4.317;VQSLOD=-0.6680;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:34:50.60:0,51,1029	0/1:5,0:4:0:0,0,0	0/1:27,0:5:19.01:31,0,19	0/1:49,0:15:99:119,0,115	0/0:7,1:6:2.22:0,2,7	0/0:19,0:17:4.60:0,5,48	0/0:45,0:34:12.98:0,13,194	./.	0/0:24,0:16:25.39:0,25,502	0/1:14,0:12:0.60:1,0,108	0/1:6,0:4:0:0,0,0	0/0:33,1:31:6.83:0,7,694	0/0:21,0:17:20.23:0,20,563	0/0:40,0:30:35.91:0,36,755	1/1:11,0:9:3.01:35,3,0	0/0:18,0:13:14.36:0,14,128	0/1:8,0:6:0.41:0,0,15	0/0:7,0:5:11.22:0,11,135	1/1:6,0:1:2.97:20,3,0	./.	./.	0/1:29,1:26:22.36:22,0,249	0/0:22,1:18:11.73:0,12,318	0/0:45,0:43:51.07:0,51,1291	0/1:23,0:16:7.08:10,0,7	0/1:15,0:10:35.84:36,0,60	0/0:6,0:5:0.62:0,1,2	1/1:1,0:1:2.50:9,2,0
chr10	17256157	.	A	ACG	66.82	PASS	AB=0.765;AC=3;AF=0.063;AN=48;BaseQRankSum=1.601;DP=485;FS=13.279;HRun=0;HaplotypeScore=137.0630;InbreedingCoeff=0.2910;MQ=32.21;MQ0=47;MQRankSum=-3.101;QD=3.71;ReadPosRankSum=-0.615;VQSLOD=1.3760;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:28:42.99:0,43,625	0/0:3,0:3:5.84:0,6,35	0/0:55,0:9:26.80:0,27,220	0/0:68,0:19:52.71:0,53,438	0/0:6,0:5:2.68:0,3,12	0/0:11,0:10:9.02:0,9,40	0/0:28,2:24:15.58:0,16,90	./.	0/0:23,0:16:26.80:0,27,357	0/0:12,0:10:17.33:0,17,114	0/0:4,0:3:0.47:0,0,1	0/0:31,0:29:33.10:0,33,539	0/0:19,0:15:16.93:0,17,359	0/0:33,0:24:36.82:0,37,465	0/0:8,0:6:0.08:0,0,14	0/1:9,4:12:50.56:95,0,51	0/0:6,0:5:4.50:0,4,22	1/1:3,2:4:6.01:63,6,0	./.	./.	./.	0/0:26,0:24:30.93:0,31,260	0/0:16,0:13:14.45:0,14,202	0/0:38,0:36:53.99:0,54,794	0/0:14,0:12:9.47:0,9,37	0/0:13,0:10:25.67:0,26,185	0/0:2,0:2:3.44:0,3,20	0/0:1,0:1:2.98:0,3,21
chr10	17256158	.	A	AAC	545.03	PASS	AB=0.870;AC=19;AF=0.413;AN=46;BaseQRankSum=2.923;DP=485;FS=6.857;HRun=0;HaplotypeScore=135.7124;InbreedingCoeff=0.5746;MQ=31.87;MQ0=48;MQRankSum=-3.819;QD=5.51;ReadPosRankSum=-1.784;VQSLOD=2.6124;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:27:30.04:0,30,370	0/1:3,0:3:0:0,0,0	0/0:56,0:9:24.07:0,24,290	0/0:71,0:20:17.21:0,17,397	1/1:4,2:5:2.49:9,2,0	1/1:12,0:11:0.28:2,0,0	0/0:29,1:24:5.45:0,5,57	./.	0/0:21,0:14:17.95:0,18,208	1/1:8,4:10:12.51:199,13,0	0/1:3,1:3:0:0,0,0	0/0:31,0:29:38.43:0,38,406	0/0:19,0:15:23.52:0,24,289	0/0:32,0:23:31.55:0,32,344	0/1:4,4:6:1.33:17,0,1	0/1:13,0:12:25.63:52,0,26	1/1:5,1:5:3.48:51,3,0	1/1:5,0:4:0.89:2,1,0	./.	./.	./.	0/0:26,0:24:23.39:0,23,235	0/0:17,0:13:8.96:0,9,113	0/0:38,0:36:32.97:0,33,399	0/1:13,1:12:0.01:0,0,0	1/1:7,6:10:18.06:285,18,0	1/1:1,1:2:5.97:68,6,0	./.
chr10	17256187	.	ACGCGCG	A	74.26	PASS	AB=0.990;AC=9;AF=0.214;AN=42;BaseQRankSum=1.357;DP=313;FS=49.772;HRun=0;HaplotypeScore=95.6686;InbreedingCoeff=0.1665;MQ=29.02;MQ0=26;MQRankSum=-2.663;QD=0.47;ReadPosRankSum=-2.330;VQSLOD=-0.3831;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:12:21.01:0,21,569	./.	0/1:60,2:8:55.76:56,0,250	0/1:66,3:15:90.21:90,0,448	0/1:3,0:3:0:1,0,0	1/1:11,0:9:0.89:2,1,0	0/0:12,1:12:2.42:0,2,18	./.	0/0:15,2:10:17.80:0,18,451	0/0:4,0:4:9.03:0,9,178	0/1:1,0:1:0:0,0,0	0/0:14,0:11:27.09:0,27,647	0/0:10,0:9:22.31:0,22,395	0/0:17,0:14:24.11:0,24,414	0/0:3,0:3:2.91:0,3,74	0/1:5,0:5:17.85:18,0,24	0/1:1,0:1:0:0,0,0	./.	./.	./.	./.	0/0:18,0:17:6.32:0,6,489	0/0:8,0:6:2.58:0,3,25	0/0:23,0:18:30.35:0,30,697	0/1:6,0:4:0:0,0,0	0/0:8,0:6:15.04:0,15,315	0/0:2,0:2:6.02:0,6,147	./.
chr10	17256199	.	AC	A	1472.13	PASS	AB=0.750;AC=24;AF=0.600;AN=40;BaseQRankSum=-1.138;DP=269;FS=60.443;HRun=2;HaplotypeScore=78.0722;InbreedingCoeff=0.3636;MQ=30.36;MQ0=20;MQRankSum=0.992;QD=11.32;ReadPosRankSum=2.735;VQSLOD=-0.7474;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:7,6:11:83.68:84,0,85	./.	0/0:46,3:4:3:0,3,25	0/0:47,3:3:6.02:0,6,74	./.	0/0:11,3:10:4.30:0,4,45	0/0:17,1:16:5.57:0,6,60	./.	1/1:10,8:11:23.28:260,23,0	1/1:3,0:3:5.61:45,6,0	./.	1/1:8,7:12:18.05:219,18,0	0/1:7,4:10:0.64:140,0,1	1/1:8,5:12:8.36:148,8,0	1/1:1,0:1:3.01:36,3,0	0/1:4,0:4:9.11:66,0,9	0/1:1,1:2:0:1,0,0	0/0:2,0:2:2.37:0,2,8	./.	./.	./.	1/1:4,10:13:21.42:237,21,0	0/1:4,2:4:0:1,0,0	1/1:9,12:16:16.35:216,16,0	0/1:2,2:2:0:0,0,0	1/1:2,1:2:6.02:74,6,0	1/1:2,0:2:6.02:72,6,0	./.
chr10	17256200	.	C	CA	1513.16	PASS	AB=0.917;AC=25;AF=0.658;AN=38;BaseQRankSum=-0.603;DP=263;FS=38.236;HRun=1;HaplotypeScore=81.7419;InbreedingCoeff=0.4196;MQ=30.47;MQ0=21;MQRankSum=0.552;QD=11.91;ReadPosRankSum=3.235;VQSLOD=0.1865;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:14,0:12:65.17:106,0,65	./.	0/0:48,0:3:3:0,3,25	0/0:47,0:3:6.01:0,6,69	./.	0/0:12,1:9:4.24:0,4,44	0/0:15,0:17:5.57:0,6,60	./.	1/1:17,0:12:22.84:235,23,0	1/1:1,1:2:5.61:55,6,0	./.	1/1:13,1:12:18.02:165,18,0	1/1:10,0:10:14.40:140,14,0	1/1:12,0:11:14.42:145,14,0	1/1:0,1:1:3.01:45,3,0	0/1:4,1:6:8:90,0,8	0/1:2,0:2:0:1,0,0	0/0:1,0:1:1.55:0,2,4	./.	./.	./.	1/1:11,2:14:21.03:248,21,0	1/1:5,1:5:0.47:1,0,0	1/1:20,0:15:16.36:236,16,0	./.	1/1:2,1:2:6.02:83,6,0	1/1:0,2:2:6.02:90,6,0	./.
chr10	17256213	.	C	CG	286.59	PASS	AB=0.944;AC=22;AF=0.524;AN=42;BaseQRankSum=2.353;DP=260;FS=55.388;HRun=0;HaplotypeScore=89.3142;InbreedingCoeff=0.2198;MQ=28.71;MQ0=17;MQRankSum=-0.588;QD=2.05;ReadPosRankSum=2.400;VQSLOD=-0.0545;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:14:7.18:0,7,173	1/1:2,0:2:2.92:17,3,0	0/0:33,0:6:12.03:0,12,140	0/1:41,0:2:10.20:10,0,34	0/0:1,0:1:0:0,0,0	0/0:9,2:7:4.83:0,5,79	0/0:31,1:22:23.93:0,24,267	./.	1/1:10,0:8:10.89:75,11,0	1/1:2,0:3:8.92:68,9,0	./.	0/1:15,1:14:34.21:34,0,64	0/1:11,0:10:24.86:25,0,102	0/1:12,1:12:11.36:11,0,26	1/1:2,0:2:3:27,3,0	0/1:10,1:8:31.74:48,0,32	./.	0/0:4,0:3:9.02:0,9,110	./.	./.	./.	1/1:10,0:9:7.86:28,8,0	0/1:6,0:5:0:1,0,0	0/0:19,0:12:6.44:0,6,97	1/1:6,0:4:0.44:2,0,0	1/1:2,0:1:3:25,3,0	1/1:2,0:2:5.99:50,6,0	./.
chr10	17256221	.	ACG	A	396.28	PASS	AB=0.938;AC=24;AF=0.571;AN=42;BaseQRankSum=5.811;DP=284;FS=55.005;HRun=0;HaplotypeScore=94.9140;InbreedingCoeff=0.3797;MQ=29.18;MQ0=23;MQRankSum=-2.598;QD=2.87;ReadPosRankSum=-0.181;VQSLOD=-0.1223;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:14:8.99:0,9,168	1/1:2,0:2:2.37:8,2,0	0/0:35,0:6:15.04:0,15,207	0/0:37,0:2:6:0,6,58	0/1:1,0:1:0:0,0,0	1/1:12,0:7:2.99:24,3,0	0/0:39,0:26:11.72:0,12,171	./.	0/1:11,1:10:32.10:57,0,32	1/1:2,1:3:8.95:66,9,0	./.	1/1:18,2:17:15.88:111,16,0	0/1:13,0:11:19.53:20,0,188	1/1:12,4:11:8.10:62,8,0	./.	1/1:11,2:10:12.38:80,12,0	0/1:2,0:2:0:0,0,0	0/0:5,0:4:10.69:0,11,88	./.	./.	./.	1/1:9,3:10:10.96:58,11,0	0/1:4,2:5:0.11:0,0,0	0/1:21,1:14:8.33:8,0,106	0/0:7,0:5:1.13:0,1,3	1/1:2,0:1:2.97:20,3,0	1/1:2,0:2:2.94:18,3,0	./.
chr10	17256237	.	GCA	G	75.45	PASS	AB=0.905;AC=10;AF=0.250;AN=40;BaseQRankSum=1.622;DP=356;FS=3.139;HRun=0;HaplotypeScore=108.5835;InbreedingCoeff=0.1510;MQ=28.77;MQ0=36;MQRankSum=-1.183;QD=0.55;ReadPosRankSum=0.037;VQSLOD=2.1050;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:21:11.60:0,12,177	0/0:2,0:2:2.68:0,3,11	0/0:22,0:6:6.02:0,6,92	0/0:30,0:2:6.02:0,6,88	./.	1/1:10,2:7:0.84:4,1,0	0/1:39,13:36:28.06:28,0,74	./.	0/1:16,0:12:6.41:6,0,45	0/0:5,0:5:1.12:0,1,29	./.	0/0:27,1:23:7.95:0,8,81	0/0:15,0:11:8.56:0,9,94	0/0:17,0:11:2.60:0,3,10	./.	1/1:14,3:13:8.71:73,9,0	0/0:5,0:5:3.16:0,3,9	0/1:7,2:7:62.78:63,0,69	0/0:6,0:2:2.90:0,3,16	./.	0/1:14,0:3:0:0,0,0	1/1:16,0:12:1.11:5,1,0	0/0:9,0:6:1.71:0,2,5	0/0:29,1:21:9.44:0,9,143	0/0:11,0:9:3.60:0,4,14	./.	./.	./.
chr10	17256253	.	G	GCA	84.50	PASS	AB=0.947;AC=16;AF=0.348;AN=46;BaseQRankSum=2.850;DP=372;FS=4.897;HRun=0;HaplotypeScore=111.5914;InbreedingCoeff=0.1136;MQ=26.09;MQ0=45;MQRankSum=-2.347;QD=0.56;ReadPosRankSum=-0.745;VQSLOD=1.8464;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,1:26:11.34:0,11,169	1/1:3,0:3:2.97:20,3,0	0/0:9,0:3:3.01:0,3,43	0/0:15,0:2:2.84:0,3,14	1/1:5,0:4:2.04:6,2,0	0/1:10,0:6:0.17:2,0,0	0/1:48,5:37:26.44:26,0,96	./.	0/1:16,0:11:3.30:3,0,22	1/1:5,0:5:0.67:3,1,0	1/1:4,0:4:2.22:7,2,0	0/0:28,0:26:1.97:0,2,57	0/1:15,0:12:23.81:24,0,37	0/0:19,0:13:2.84:0,3,16	./.	0/0:13,1:10:3.55:0,4,40	0/0:5,0:4:2.59:0,3,25	0/1:7,3:7:82.72:91,0,83	./.	./.	1/1:15,0:2:2.80:13,3,0	0/0:20,0:15:2.55:0,3,7	0/1:13,0:8:0.03:0,0,0	0/0:36,0:27:14.75:0,15,208	0/0:15,0:13:0.80:0,1,10	0/0:4,0:1:0.47:0,0,1	./.	0/0:2,0:2:3:0,3,25
chr10	17256255	.	ACG	A	139.33	PASS	AB=0.933;AC=15;AF=0.326;AN=46;BaseQRankSum=3.808;DP=375;FS=11.319;HRun=0;HaplotypeScore=111.0999;InbreedingCoeff=0.3103;MQ=26.16;MQ0=44;MQRankSum=-2.243;QD=1.11;ReadPosRankSum=-0.443;VQSLOD=1.3626;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,1:26:11.60:0,12,221	0/0:4,0:4:1.53:0,2,4	0/0:8,0:2:3.01:0,3,53	0/0:13,0:2:1.25:0,1,3	0/1:5,0:4:0.38:0,0,0	1/1:11,0:6:4.41:15,4,0	0/0:52,1:37:11.43:0,11,116	./.	0/1:17,0:11:14.66:32,0,15	1/1:5,0:5:8.49:47,8,0	0/0:4,0:4:0.12:0,0,0	0/0:27,3:27:5.75:0,6,110	0/1:15,0:12:15.68:20,0,16	0/0:19,0:13:2.28:0,2,22	./.	1/1:14,0:10:3.57:63,4,0	0/1:3,2:4:0.10:41,0,0	0/0:10,0:7:14.26:0,14,130	./.	./.	1/1:17,0:4:2.80:13,3,0	0/1:19,1:15:2.57:3,0,5	0/0:12,1:8:2.31:0,2,7	0/0:34,2:27:14.56:0,15,242	1/1:17,0:14:4.74:31,5,0	0/0:4,0:1:1.25:0,1,3	./.	0/0:2,0:2:2.97:0,3,20
chr10	17256269	.	ACG	A	231.36	PASS	AB=0.980;AC=25;AF=0.543;AN=46;BaseQRankSum=3.023;DP=389;FS=22.256;HRun=0;HaplotypeScore=116.0686;InbreedingCoeff=0.1215;MQ=26.65;MQ0=46;MQRankSum=-2.392;QD=0.93;ReadPosRankSum=-1.098;VQSLOD=0.2585;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:24:1.54:2,0,137	0/1:5,0:5:0.71:3,0,1	./.	0/1:2,0:1:0:0,0,0	0/1:11,0:10:0.44:1,0,0	1/1:12,0:8:7.47:30,7,0	0/0:45,1:32:8.57:0,9,113	./.	0/1:20,0:14:16.06:22,0,16	1/1:8,0:6:14.81:102,15,0	0/0:6,0:6:0.12:0,0,0	0/1:28,1:27:0.17:0,0,97	0/1:13,0:10:12.10:20,0,12	1/1:20,0:15:1.31:5,1,0	./.	0/1:12,0:8:18.24:18,0,28	0/1:7,0:6:22.37:34,0,22	0/0:12,0:8:21.01:0,21,270	./.	./.	1/1:19,0:5:2.84:14,3,0	0/1:21,1:15:4.67:8,0,5	0/0:14,1:8:2.53:0,3,8	0/0:39,1:31:11.37:0,11,172	0/1:22,1:20:2.74:40,0,3	1/1:8,0:6:4.83:34,5,0	1/1:3,0:1:0.89:2,1,0	1/1:3,0:2:2.97:20,3,0
chr10	17256275	.	GCA	G	232.86	PASS	AB=1.000;AC=12;AF=0.273;AN=44;BaseQRankSum=-2.653;DP=391;FS=11.002;HRun=0;HaplotypeScore=118.4678;InbreedingCoeff=0.3532;MQ=26.30;MQ0=50;MQRankSum=2.375;QD=1.28;ReadPosRankSum=1.124;VQSLOD=1.8494;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:31,1:23:8.72:107,9,0	0/0:6,0:6:6.39:0,6,40	./.	./.	0/0:12,0:12:0:0,0,1	0/0:11,0:7:4.69:0,5,18	0/0:38,0:25:6.47:0,6,58	./.	0/1:17,0:12:4.71:5,0,6	0/0:10,0:7:0.93:0,1,7	0/0:6,0:6:0.47:0,0,1	0/0:28,2:25:2.58:0,3,11	1/1:13,0:10:1.87:6,2,0	0/0:19,1:15:0.32:0,0,2	./.	1/1:11,0:7:3.53:14,4,0	0/0:8,0:6:4.23:0,4,24	0/0:11,0:8:11.98:0,12,129	./.	./.	0/1:20,0:5:0:0,0,0	0/1:25,0:17:0.68:1,0,7	0/0:15,1:8:3.29:0,3,10	1/1:32,8:32:20.97:210,21,0	0/1:24,0:20:1.73:2,0,7	0/0:13,0:10:4.03:0,4,24	0/0:3,0:1:2.80:0,3,13	0/0:4,0:3:1.82:0,2,5
chr10	17256283	.	A	ACG	89.39	PASS	AB=0.964;AC=13;AF=0.271;AN=48;BaseQRankSum=2.541;DP=435;FS=4.875;HRun=0;HaplotypeScore=109.5652;InbreedingCoeff=0.2826;MQ=25.65;MQ0=56;MQRankSum=-3.543;QD=0.50;ReadPosRankSum=0.454;VQSLOD=1.7712;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:22:7.66:8,0,111	0/0:7,0:6:8.24:0,8,65	0/0:4,0:1:2.98:0,3,22	./.	0/1:13,0:13:0.03:1,0,0	0/1:14,1:8:2.34:3,0,2	1/1:39,1:25:1.23:32,1,0	0/0:7,0:5:3:0,3,25	0/0:23,0:13:12.77:0,13,67	0/0:11,0:8:16.93:0,17,91	1/1:6,0:6:1.87:6,2,0	0/0:29,0:24:10.93:0,11,60	1/1:13,0:9:4.57:40,5,0	0/0:25,1:20:7.23:0,7,39	./.	0/1:11,0:8:5.86:35,0,6	0/1:8,0:6:2.05:2,0,5	0/0:11,0:7:15.83:0,16,128	./.	./.	0/1:17,0:5:0:0,0,0	0/0:27,0:19:6.91:0,7,23	0/0:16,0:8:2.49:0,2,7	0/0:43,0:33:26.18:0,26,201	0/1:22,2:20:4.75:78,0,5	0/0:16,0:11:14.37:0,14,103	0/0:4,0:1:2.80:0,3,13	0/0:6,0:4:8.93:0,9,66
chr10	17256410	.	ACG	A	40.15	PASS	AB=0.931;AC=11;AF=0.423;AN=26;BaseQRankSum=1.398;DP=203;FS=0.000;HRun=0;HaplotypeScore=52.5378;InbreedingCoeff=0.1311;MQ=25.70;MQ0=15;MQRankSum=0.643;QD=0.32;ReadPosRankSum=0.794;VQSLOD=1.3815;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:17,0:15:0.03:0,0,0	./.	./.	0/0:22,0:3:5.55:0,6,26	./.	0/1:5,1:3:0:0,0,0	0/1:27,1:18:14.64:35,0,15	./.	0/0:8,0:6:2.73:0,3,18	./.	./.	0/1:12,3:11:2.26:2,0,27	0/0:7,1:4:2.26:0,2,13	./.	0/0:2,0:2:0:0,0,0	./.	./.	1/1:10,1:10:5.99:57,6,0	./.	./.	./.	0/0:2,0:3:0.47:0,0,1	1/1:9,0:6:3.35:16,3,0	0/1:37,0:32:12.35:12,0,54	1/1:2,0:1:2.04:6,2,0	./.	./.	./.
chr10	17257318	.	CGGTAGCATATCTACT	C	14641.64	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=15.601;DP=638;FS=5.279;HRun=0;HaplotypeScore=277.4309;InbreedingCoeff=0.9690;MQ=88.78;MQ0=0;MQRankSum=-14.519;QD=86.64;ReadPosRankSum=3.843;VQSLOD=4.1087;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,144,9365	1/1:1,13:14:21.07:936,21,0	0/0:34,0:34:94.20:0,94,4471	0/0:18,0:18:42.13:0,42,2660	1/1:1,29:30:60.16:2495,60,0	0/0:12,0:12:36.12:0,36,2462	0/0:18,0:18:51.18:0,51,3712	0/0:33,0:33:84.29:0,84,5209	0/0:24,0:24:63.22:0,63,4569	1/1:2,18:20:51.16:2051,51,0	1/1:1,8:9:15.05:667,15,0	0/0:22,0:22:66.23:0,66,4657	0/0:26,0:26:72.25:0,72,5118	0/0:31,0:31:90.29:0,90,6159	1/1:3,24:27:57.20:2538,57,0	0/0:23,0:23:69.24:0,69,4699	1/1:3,15:18:27.09:1202,27,0	0/0:21,0:21:60.21:0,60,3978	0/0:31,0:31:87.28:0,87,4625	0/0:28,0:28:75.24:0,75,5143	0/0:29,0:29:84.29:0,84,5081	0/0:27,0:27:78.27:0,78,5047	0/0:15,0:15:45.15:0,45,2635	0/0:10,0:10:30.10:0,30,2239	0/0:17,0:17:51.18:0,51,3510	1/1:1,19:20:57.07:2080,57,0	1/1:4,25:29:57.20:2539,57,0	1/1:0,2:2:3.01:134,3,0
chr10	17259013	.	GTC	G	10534.01	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=16.419;DP=673;FS=1.683;HRun=0;HaplotypeScore=103.1393;InbreedingCoeff=0.9985;MQ=83.38;MQ0=0;MQRankSum=-1.586;QD=35.95;ReadPosRankSum=1.367;VQSLOD=6.9430;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,135,2336	1/1:0,6:6:18.06:244,18,0	0/0:28,0:30:77.04:0,77,1103	0/0:25,0:23:27.07:0,27,498	1/1:1,18:19:51.17:690,51,0	0/0:27,0:27:72.25:0,72,1262	0/0:17,0:17:48.16:0,48,841	1/1:6,31:37:93.29:1241,93,0	0/0:29,0:29:81.28:0,81,1406	1/1:0,21:21:60.16:777,60,0	1/1:2,14:16:42.14:568,42,0	0/0:30,0:30:90.31:0,90,1570	0/0:14,0:14:39.13:0,39,683	0/0:25,0:25:72.24:0,72,1227	1/1:1,22:23:63.21:852,63,0	0/0:31,0:31:93.32:0,93,1601	1/1:0,23:23:60.20:801,60,0	0/0:13,0:13:27.09:0,27,473	1/1:4,19:23:57.15:737,57,0	1/1:1,22:24:66.22:892,66,0	1/1:0,24:24:63.21:852,63,0	0/0:22,0:22:60.21:0,60,1052	0/0:25,0:25:69.24:0,69,1210	0/0:21,0:21:60.19:0,60,1006	0/0:19,0:19:54.19:0,54,947	1/1:1,33:34:99:1338,99,0	1/1:2,31:33:87.29:1177,87,0	1/1:1,9:10:27.09:365,27,0
chr10	17260031	.	CAT	C	2474.43	PASS	AB=1.000;AC=14;AF=0.269;AN=52;BaseQRankSum=6.512;DP=281;FS=20.987;HRun=0;HaplotypeScore=61.5016;InbreedingCoeff=0.5243;MQ=54.91;MQ0=0;MQRankSum=-1.670;QD=19.80;ReadPosRankSum=-2.523;VQSLOD=1.3566;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:24.06:0,24,393	0/0:3,0:3:6.02:0,6,108	./.	0/0:6,0:3:5.94:0,6,41	0/0:13,0:13:24.07:0,24,401	0/1:15,0:15:7.82:8,0,89	1/1:3,0:3:2.67:14,3,0	1/1:3,41:44:99:1571,123,0	0/0:2,0:2:6.02:0,6,108	0/0:8,0:8:21.07:0,21,356	0/0:12,0:12:27.09:0,27,479	0/0:5,0:5:15.05:0,15,269	0/0:2,0:2:6.02:0,6,102	0/0:5,0:5:15.05:0,15,270	0/0:6,0:6:2.69:0,3,54	0/0:5,0:5:2.01:0,2,12	0/0:22,0:22:41.97:0,42,680	0/1:23,0:23:42.90:43,0,87	1/1:2,20:22:60.13:798,60,0	1/1:2,5:7:8.72:124,9,0	1/1:0,4:4:2.88:41,3,0	0/0:3,0:3:9.02:0,9,127	0/0:6,0:6:18.06:0,18,324	./.	1/1:7,0:7:0.07:30,0,0	0/0:5,0:5:11.47:0,11,116	0/0:12,0:12:33.08:0,33,533	0/0:24,0:23:69.18:0,69,1123
chr10	17260036	.	ATG	A	1699.33	PASS	AC=18;AF=0.346;AN=52;BaseQRankSum=7.651;DP=282;FS=15.719;HRun=0;HaplotypeScore=67.0396;InbreedingCoeff=0.8045;MQ=51.85;MQ0=0;MQRankSum=-0.925;QD=12.97;ReadPosRankSum=-3.083;VQSLOD=1.5052;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:24.04:0,24,353	0/0:3,0:3:6.02:0,6,102	./.	0/0:5,0:2:3.01:0,3,32	0/0:13,0:13:21.07:0,21,351	1/1:15,1:16:19.82:183,20,0	1/1:3,0:3:6.01:64,6,0	1/1:43,0:42:99:617,102,0	0/0:2,0:2:6.02:0,6,102	0/0:7,0:7:21.06:0,21,298	0/0:13,0:13:27.08:0,27,432	0/0:6,0:6:18.06:0,18,301	0/0:2,0:2:6.02:0,6,102	0/0:5,0:5:15.05:0,15,251	0/0:6,0:6:2.69:0,3,51	1/1:5,0:5:7.81:56,8,0	0/0:21,0:21:38.95:0,39,605	1/1:16,4:20:43.07:387,43,0	1/1:22,0:23:23.03:324,23,0	1/1:7,0:7:8.51:57,9,0	1/1:5,0:4:2.85:22,3,0	0/0:3,0:3:8.92:0,9,118	0/0:6,0:6:18.06:0,18,306	./.	1/1:9,0:9:16.72:177,17,0	0/0:6,0:6:17.96:0,18,183	0/0:13,0:13:30.05:0,30,469	0/0:24,0:23:60.18:0,60,967
chr10	17260057	.	CATAT	C	1477.95	PASS	AB=1.000;AC=9;AF=0.173;AN=52;BaseQRankSum=3.403;DP=286;FS=5.894;HRun=0;HaplotypeScore=82.7170;InbreedingCoeff=0.6204;MQ=47.83;MQ0=1;MQRankSum=-5.884;QD=17.81;ReadPosRankSum=-2.640;VQSLOD=2.4322;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:24.08:0,24,527	0/0:3,0:3:2.84:0,3,72	./.	0/0:5,0:2:2.22:0,2,7	0/0:14,0:15:15.05:0,15,379	0/0:12,0:12:14.84:0,15,282	0/1:4,0:7:5.29:5,0,160	1/1:29,10:38:51.62:760,52,0	0/0:3,0:3:9.03:0,9,199	0/0:7,0:7:18.01:0,18,388	0/0:13,0:13:21.04:0,21,428	0/0:8,0:8:24.08:0,24,554	0/0:5,0:4:9.02:0,9,172	0/0:5,0:5:9.03:0,9,183	0/0:6,0:6:3.48:0,3,77	0/0:7,0:7:9.08:0,9,176	0/0:21,0:21:38.16:0,38,803	0/0:15,0:16:29.20:0,29,550	1/1:12,10:22:48.08:718,48,0	1/1:6,3:9:5.32:97,5,0	1/1:4,2:5:2.74:38,3,0	0/0:3,0:3:9.03:0,9,227	0/0:12,0:12:24.08:0,24,499	./.	0/0:7,0:7:9.03:0,9,174	0/0:8,0:8:23.92:0,24,434	0/0:12,0:12:21.05:0,21,470	0/0:22,0:21:57.15:0,57,1319
chr10	17260072	.	ATG	A	461.47	PASS	AB=0.956;AC=9;AF=0.167;AN=54;BaseQRankSum=6.442;DP=307;FS=17.144;HRun=0;HaplotypeScore=75.4667;InbreedingCoeff=0.1168;MQ=48.85;MQ0=3;MQRankSum=-5.937;QD=4.05;ReadPosRankSum=0.355;VQSLOD=0.9976;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:26.66:0,27,400	0/0:4,0:4:2.94:0,3,25	./.	0/1:8,0:4:3.49:13,0,3	0/0:16,0:16:15.05:0,15,249	0/1:12,0:12:9:9,0,113	0/1:8,0:8:14.07:14,0,16	0/1:26,7:32:99:184,0,132	0/0:7,0:7:20.77:0,21,257	0/0:10,0:10:22.65:0,23,355	0/1:12,0:12:7.43:7,0,221	0/0:9,0:9:27.08:0,27,474	0/0:5,0:4:9.02:0,9,146	0/0:8,0:8:15:0,15,201	0/0:7,0:7:2.58:0,3,49	0/1:8,0:8:11.40:11,0,97	0/0:20,0:20:38.95:0,39,523	0/0:14,0:14:8.09:0,8,332	0/1:16,3:19:1.94:296,0,2	1/1:6,8:14:5.35:56,5,0	0/0:3,2:4:1.82:0,2,5	0/0:4,0:4:12.03:0,12,207	0/0:14,0:14:35.89:0,36,542	0/0:3,0:3:8.98:0,9,73	0/0:6,0:6:8.81:0,9,76	0/0:11,0:11:13.03:0,13,392	0/0:12,0:12:21.02:0,21,309	0/0:18,0:18:41.37:0,41,748
chr10	17260074	.	G	GGAGAGA	2387.52	PASS	AB=0.957;AC=29;AF=0.537;AN=54;BaseQRankSum=1.864;DP=342;FS=2.021;HRun=0;HaplotypeScore=112.2663;InbreedingCoeff=0.5472;MQ=48.14;MQ0=4;MQRankSum=-5.825;QD=9.95;ReadPosRankSum=-1.110;VQSLOD=2.6068;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:11.85:0,12,250	1/1:3,0:3:2.04:6,2,0	./.	0/0:10,0:5:0.59:0,1,4	0/1:16,0:18:0:0,0,0	1/1:11,1:13:3.01:75,3,0	1/1:6,3:9:9.03:248,9,0	0/1:32,0:33:36.90:37,0,272	0/0:8,0:8:21.05:0,21,364	1/1:9,0:12:15.02:322,15,0	1/1:12,0:11:6.01:86,6,0	0/0:9,0:9:18.05:0,18,326	0/0:5,0:4:9.03:0,9,188	0/0:8,0:8:12.04:0,12,231	1/1:9,0:11:4.77:60,5,0	1/1:5,3:10:12.04:287,12,0	1/1:16,0:25:8.79:194,9,0	1/1:11,5:18:11.07:296,11,0	0/1:20,0:20:59.06:59,0,65	0/0:14,0:14:0.57:0,1,2	0/0:6,0:5:0.56:0,1,1	0/0:5,0:5:6.02:0,6,113	0/0:14,0:14:24.08:0,24,488	0/0:3,0:3:9.03:0,9,187	1/1:7,0:7:3.01:62,3,0	1/1:14,0:14:14.97:275,15,0	1/1:13,0:13:6.34:40,6,0	1/1:21,0:21:21.07:513,21,0
chr10	17262243	.	G	GCCA	6729.54	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-13.528;DP=780;FS=8.822;HRun=0;HaplotypeScore=103.3792;InbreedingCoeff=0.9377;MQ=86.36;MQ0=0;MQRankSum=-3.562;QD=48.41;ReadPosRankSum=1.553;VQSLOD=7.0567;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:87.29:0,87,1300	0/0:9,0:9:21.07:0,21,314	0/0:25,0:25:41.14:0,41,606	0/0:31,0:31:69.15:0,69,938	0/0:23,0:23:66.22:0,66,984	1/1:3,31:34:78.27:1634,78,0	1/1:2,32:35:84.29:1756,84,0	0/0:31,0:31:66.21:0,66,967	0/0:31,0:31:87.29:0,87,1290	0/0:33,0:34:93.28:0,93,1367	0/0:18,0:18:54.18:0,54,807	0/0:39,0:39:99:0,105,1497	0/0:28,0:29:84.25:0,84,1223	0/0:32,0:32:84.22:0,84,1205	0/0:42,0:42:99:0,111,1637	1/1:4,25:29:33.41:1501,33,0	0/0:30,0:30:90.29:0,90,1324	1/1:1,18:20:48.16:1005,48,0	0/0:29,0:29:57.19:0,57,844	0/0:19,0:19:48.16:0,48,715	0/0:33,0:33:81.25:0,81,1184	0/0:27,0:27:69.23:0,69,1031	0/0:18,0:18:51.14:0,51,722	0/0:31,0:31:81.27:0,81,1205	1/1:6,14:21:0.30:834,0,0	0/0:38,0:38:96.31:0,96,1401	0/0:24,0:24:63.21:0,63,942	0/0:12,0:12:27.56:0,28,402
chr10	17265189	.	T	TC	9282.05	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-8.038;DP=604;FS=2.664;HRun=4;HaplotypeScore=61.4204;InbreedingCoeff=0.9978;MQ=78.86;MQ0=0;MQRankSum=-5.510;QD=35.16;ReadPosRankSum=3.143;VQSLOD=5.5100;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,99,1102	1/1:1,9:10:24.08:328,24,0	0/0:14,0:14:36.07:0,36,387	0/0:14,0:14:35.95:0,36,379	1/1:1,17:18:48.16:654,48,0	1/1:1,13:14:39.13:533,39,0	1/1:2,32:34:87.29:1190,87,0	0/0:36,0:36:93.26:0,93,1046	0/0:18,0:18:48.14:0,48,544	1/1:4,15:20:45.06:588,45,0	1/1:0,8:8:21.07:286,21,0	0/0:35,0:35:96.21:0,96,1063	0/0:18,0:18:51.14:0,51,577	0/0:19,0:19:51.13:0,51,568	1/1:2,14:16:39.13:533,39,0	1/1:3,19:22:20.15:663,20,0	1/1:1,25:26:69.23:944,69,0	1/1:3,32:35:96.32:1313,96,0	0/0:21,0:21:52.03:0,52,577	0/0:22,0:22:57.14:0,57,627	0/0:54,0:54:99:0,144,1597	0/0:11,0:11:33.05:0,33,352	0/0:16,0:16:48.14:0,48,540	0/0:26,0:26:69.16:0,69,762	1/1:0,16:16:42.14:574,42,0	1/1:0,20:20:60.20:816,60,0	1/1:0,17:17:42.14:574,42,0	1/1:1,7:8:21.07:286,21,0
chr10	17266745	.	CCCCTGCCCTGCCCTGCCCTGCCCTG	C	253.52	PASS	AC=10;AF=0.313;AN=32;BaseQRankSum=-0.510;DP=347;FS=6.419;HRun=0;HaplotypeScore=197.6638;InbreedingCoeff=0.4137;MQ=95.08;MQ0=9;MQRankSum=-1.257;QD=4.78;ReadPosRankSum=2.955;VQSLOD=2.0849;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:26,0:20:2.29:0,2,6	0/0:58,0:36:6.44:0,6,35	./.	./.	./.	./.	0/0:15,0:12:6.02:0,6,557	./.	./.	0/0:8,0:8:3.01:0,3,129	0/0:7,0:7:3.01:0,3,64	0/0:16,0:15:6.02:0,6,293	1/1:10,0:10:2.99:24,3,0	1/1:14,4:18:3.01:192,3,0	./.	1/1:13,0:14:3:25,3,0	./.	0/0:3,0:2:0:0,0,0	0/0:23,0:23:6.02:0,6,294	0/0:4,0:4:0.47:0,0,1	./.	0/0:18,0:18:12.04:0,12,1284	1/1:5,0:5:3.01:108,3,0	1/1:6,0:6:1.55:4,2,0	0/0:11,0:11:1.82:0,2,5	./.
chr10	17266994	.	TG	T	9108.35	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=18.495;DP=551;FS=3.268;HRun=1;HaplotypeScore=105.4889;InbreedingCoeff=0.9884;MQ=83.44;MQ0=0;MQRankSum=-3.350;QD=37.79;ReadPosRankSum=2.064;VQSLOD=5.0245;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,126,2010	1/1:0,6:6:18.06:252,18,0	0/0:14,0:14:18.06:0,18,577	0/0:22,0:22:53.72:0,54,730	1/1:0,15:15:36.12:503,36,0	1/1:0,17:17:45.15:629,45,0	1/1:0,34:34:87.28:1211,87,0	0/0:24,0:24:69.24:0,69,1101	0/0:20,0:20:60.17:0,60,926	1/1:0,10:10:30.10:420,30,0	1/1:0,8:8:21.07:293,21,0	0/0:17,0:17:48.15:0,48,744	0/0:14,0:14:42.14:0,42,671	0/0:25,0:25:69.24:0,69,1102	1/1:0,22:22:60.20:838,60,0	1/1:0,15:15:42.14:587,42,0	1/1:0,45:45:99:1678,120,0	1/1:0,22:22:66.22:923,66,0	0/0:20,0:20:57.19:0,57,883	0/0:10,0:10:30.09:0,30,457	0/0:43,0:43:99:0,129,2060	0/0:9,0:9:27.09:0,27,432	0/0:8,0:8:24.08:0,24,384	0/0:42,0:42:99:0,123,1914	1/1:1,14:15:42.13:570,42,0	1/1:0,18:18:54.18:743,54,0	1/1:0,11:11:24.08:336,24,0	1/1:0,3:3:9.03:126,9,0
chr10	17267765	.	A	AG	11196.76	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-8.512;DP=647;FS=15.527;HRun=5;HaplotypeScore=66.7476;InbreedingCoeff=0.9914;MQ=87.66;MQ0=0;MQRankSum=-3.374;QD=34.03;ReadPosRankSum=3.025;VQSLOD=3.6445;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:93.22:0,93,990	1/1:1,11:12:33.02:433,33,0	0/0:26,0:26:51.05:0,51,516	0/0:27,0:27:72.18:0,72,772	1/1:2,15:17:45.15:588,45,0	1/1:3,20:23:57.18:748,57,0	1/1:4,25:29:63.20:829,63,0	0/0:22,0:22:54.13:0,54,580	0/0:23,0:23:63.16:0,63,677	1/1:0,30:30:81.25:1048,81,0	1/1:2,14:16:36.12:469,36,0	0/0:24,0:24:63.16:0,63,677	0/0:25,0:25:69.17:0,69,741	0/0:25,0:25:72.18:0,72,774	1/1:1,31:32:84.27:1105,84,0	1/1:1,21:22:66.20:854,66,0	1/1:3,33:36:99:1340,102,0	1/1:3,28:31:81.26:1063,81,0	0/0:17,0:17:45.11:0,45,483	0/0:14,0:14:42.11:0,42,450	0/0:33,0:33:77.94:0,78,835	0/0:14,0:14:39.10:0,39,419	0/0:10,0:10:21.04:0,21,218	0/0:25,0:25:75.19:0,75,806	1/1:2,27:29:75.24:986,75,0	1/1:0,22:22:63.20:827,63,0	1/1:0,20:20:60.20:789,60,0	1/1:5,5:10:9.03:118,9,0
chr10	17267846	.	GC	G	1564.56	PASS	AB=0.989;AC=16;AF=0.286;AN=56;BaseQRankSum=-2.752;DP=366;FS=1.786;HRun=13;HaplotypeScore=79.2870;InbreedingCoeff=0.5617;MQ=87.01;MQ0=0;MQRankSum=2.580;QD=8.60;ReadPosRankSum=3.893;VQSLOD=3.1571;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:17,0:17:10.55:11,0,19	0/0:6,0:5:8.23:0,8,37	0/1:21,0:20:24.74:25,0,46	0/0:14,0:14:8.16:0,8,48	0/0:6,0:6:5.30:0,5,31	1/1:7,8:15:23.79:175,24,0	1/1:7,26:33:74.39:546,74,0	0/1:21,1:22:4.72:5,0,39	0/1:11,0:11:0:0,0,0	0/0:14,0:14:7.94:0,8,33	0/0:9,0:9:11.17:0,11,53	0/0:17,0:18:11.96:0,12,93	0/0:11,0:11:14.73:0,15,127	0/0:6,0:6:3:0,3,25	1/1:3,13:16:41.72:305,42,0	1/1:3,10:13:32.77:240,33,0	0/0:11,0:11:19.20:0,19,85	1/1:6,11:17:32.67:240,33,0	0/0:9,0:9:11.91:0,12,91	0/0:3,0:3:2.98:0,3,22	0/0:13,0:13:12.38:0,12,89	0/0:7,0:7:2.99:0,3,23	0/0:4,0:4:0.89:0,1,2	0/0:18,0:18:14.96:0,15,120	1/1:8,9:17:26.70:197,27,0	0/0:14,0:15:22.25:0,22,111	0/0:13,0:13:20.54:0,21,92	0/0:7,0:7:6.90:0,7,28
chr10	17267849	.	C	CCT	2505.89	PASS	AB=0.976;AC=25;AF=0.446;AN=56;BaseQRankSum=3.368;DP=367;FS=45.802;HRun=0;HaplotypeScore=92.0200;InbreedingCoeff=0.7299;MQ=81.90;MQ0=0;MQRankSum=-0.721;QD=12.47;ReadPosRankSum=5.942;VQSLOD=1.1942;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:39.09:0,39,317	1/1:0,6:5:8.70:145,9,0	0/0:17,0:17:26.42:0,26,279	0/0:12,0:12:8.41:0,8,128	1/1:6,0:6:8.09:86,8,0	1/1:14,0:14:26.20:141,26,0	1/1:38,0:38:47.59:287,48,0	0/0:18,0:18:25.20:0,25,193	0/0:11,0:11:6:0,6,54	1/1:13,1:14:35.71:344,36,0	1/1:7,2:9:20.76:203,21,0	0/0:16,0:16:31.13:0,31,244	0/0:11,0:11:20.61:0,21,175	0/0:6,0:6:15:0,15,130	1/1:17,0:17:8.84:83,9,0	0/1:13,0:13:0.97:65,0,1	1/1:8,6:14:11.93:373,12,0	0/1:17,0:17:79.52:82,0,80	0/0:7,0:7:18.79:0,19,153	0/0:3,0:3:5.99:0,6,50	0/0:14,0:14:16.75:0,17,130	0/0:6,0:6:8.98:0,9,73	0/0:6,0:6:14.84:0,15,112	0/0:20,0:20:45.42:0,45,388	1/1:16,0:16:28.95:135,29,0	0/1:12,1:13:12.53:274,0,13	1/1:10,4:14:24.89:317,25,0	1/1:9,0:10:12.01:181,12,0
chr10	17267850	.	C	CT	2157.28	PASS	AB=0.959;AC=24;AF=0.429;AN=56;BaseQRankSum=5.050;DP=370;FS=47.906;HRun=0;HaplotypeScore=73.6696;InbreedingCoeff=0.6495;MQ=80.78;MQ0=0;MQRankSum=-1.468;QD=10.42;ReadPosRankSum=6.638;VQSLOD=1.7325;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:44.97:0,45,385	1/1:6,0:5:8.65:46,9,0	0/0:18,0:17:27.40:0,27,297	0/0:11,0:11:8.88:0,9,145	0/1:7,0:7:9.74:76,0,10	1/1:14,0:14:30.94:164,31,0	1/1:40,0:40:61.78:400,62,0	0/0:18,0:18:25.80:0,26,215	0/0:12,0:12:8.99:0,9,77	1/1:14,0:14:35.61:311,36,0	1/1:9,0:9:13.25:117,13,0	0/0:15,0:15:29.88:0,30,241	0/0:12,0:12:20.99:0,21,198	0/0:6,0:6:14.99:0,15,128	1/1:17,0:17:27.06:171,27,0	1/1:15,0:15:8.05:127,8,0	1/1:15,1:16:9.44:198,9,0	0/1:17,0:17:46.88:117,0,47	0/0:7,0:7:20.63:0,21,156	0/0:3,0:3:5.99:0,6,49	0/0:13,0:13:17.45:0,17,139	0/0:6,0:6:8.98:0,9,73	0/0:5,0:5:14.87:0,15,110	0/0:20,0:20:44.97:0,45,388	1/1:16,0:16:34.15:188,34,0	0/1:12,1:13:20.26:200,0,20	1/1:11,2:13:22.21:182,22,0	0/1:9,1:10:8.65:66,0,9
chr10	17269241	.	GTCA	G	5434.95	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=11.659;DP=685;FS=0.784;HRun=0;HaplotypeScore=100.4500;InbreedingCoeff=0.9909;MQ=81.56;MQ0=0;MQRankSum=-3.524;QD=40.26;ReadPosRankSum=4.538;VQSLOD=5.5659;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,135,2935	0/0:11,0:11:33.10:0,33,667	0/0:29,0:28:63.21:0,63,1318	0/0:17,0:17:12.74:0,13,788	0/0:22,0:22:57.20:0,57,1242	1/1:1,21:22:57.19:916,57,0	1/1:2,19:21:51.17:819,51,0	0/0:38,0:38:96.31:0,96,1991	0/0:33,0:33:96.33:0,96,2098	0/0:21,0:21:60.21:0,60,1307	0/0:7,0:7:15.05:0,15,329	0/0:27,0:27:75.26:0,75,1654	0/0:21,0:21:57.20:0,57,1239	0/0:32,0:32:87.27:0,87,1834	1/1:1,24:25:72.24:1145,72,0	1/1:2,23:25:63.21:1012,63,0	0/0:38,0:37:99:0,99,2085	1/1:0,27:27:66.23:1061,66,0	0/0:17,0:17:45.15:0,45,957	0/0:17,0:17:45.15:0,45,989	0/0:39,0:39:99:0,111,2406	0/0:18,0:18:51.18:0,51,1114	0/0:15,0:15:39.13:0,39,821	0/0:43,0:43:99:0,123,2649	1/1:2,13:15:30.10:482,30,0	0/0:23,0:23:66.23:0,66,1431	0/0:25,0:25:69.24:0,69,1521	0/0:10,0:10:24.08:0,24,530
chr10	17270160	.	A	ACC	15482.31	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-16.060;DP=604;FS=0.971;HRun=2;HaplotypeScore=66.3676;InbreedingCoeff=0.9978;MQ=89.36;MQ0=0;MQRankSum=-3.507;QD=54.52;ReadPosRankSum=5.263;VQSLOD=4.3894;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,150,2330	1/1:1,5:6:15.05:304,15,0	0/0:27,0:27:78.20:0,78,1173	0/0:19,0:19:51:0,51,767	1/1:2,38:42:99:2193,109,0	1/1:0,22:22:63.22:1279,63,0	1/1:1,24:26:69.24:1401,69,0	0/0:29,0:29:81.26:0,81,1265	0/0:19,0:19:54.17:0,54,851	1/1:0,14:17:51.15:964,51,0	1/1:0,18:18:51.18:1036,51,0	0/0:18,0:18:51.17:0,51,832	0/0:16,0:16:48.16:0,48,781	0/0:21,0:21:60.17:0,60,924	1/1:2,22:24:60.21:1218,60,0	1/1:1,15:16:42.14:853,42,0	1/1:0,23:24:62.99:1280,63,0	1/1:0,13:13:36.12:731,36,0	0/0:26,0:26:78.24:0,78,1224	0/0:27,0:27:81.28:0,81,1317	0/0:20,0:20:57.18:0,57,904	0/0:16,0:16:48.14:0,48,736	0/0:14,0:14:33.11:0,33,538	0/0:17,0:17:51.14:0,51,770	1/1:0,18:20:54.19:1097,54,0	1/1:0,14:16:42.10:811,42,0	1/1:1,19:19:57.20:1157,57,0	1/1:0,19:19:57.20:1158,57,0
chr10	17273084	.	A	AT	10285.35	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=15.538;DP=613;FS=9.972;HRun=6;HaplotypeScore=97.4994;InbreedingCoeff=0.9990;MQ=74.69;MQ0=0;MQRankSum=-1.506;QD=33.07;ReadPosRankSum=2.323;VQSLOD=3.9077;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,114,1150	1/1:0,9:9:24.08:302,24,0	0/0:24,0:23:44.01:0,44,429	0/0:14,0:13:21.50:0,21,202	1/1:3,29:32:87.19:1055,87,0	1/1:0,28:28:84.27:1057,84,0	1/1:1,14:15:39.12:491,39,0	0/0:34,0:34:84.15:0,84,841	0/0:18,0:18:48.10:0,48,483	1/1:5,31:36:93.27:1142,93,0	1/1:3,17:21:48.15:593,48,0	0/0:15,0:15:45.10:0,45,459	0/0:21,0:21:60.11:0,60,602	0/0:20,0:20:57.12:0,57,575	1/1:1,22:23:63.20:793,63,0	1/1:2,20:22:60.19:754,60,0	1/1:2,23:25:63.20:793,63,0	1/1:1,15:16:42.13:528,42,0	0/0:13,0:13:30.06:0,30,306	0/0:13,0:14:38.12:0,38,373	0/0:16,0:16:39.07:0,39,391	0/0:26,0:26:75.17:0,75,765	0/0:26,0:26:78.18:0,78,795	0/0:21,0:21:60.12:0,60,601	1/1:1,23:24:63.20:792,63,0	1/1:1,23:24:69.21:855,69,0	1/1:5,19:25:60.19:754,60,0	1/1:1,10:11:30.10:377,30,0
chr10	17273487	.	T	TCATCCAGGTGGGAGCATGGCAG	27063.29	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-6.592;DP=822;FS=4.615;HRun=0;HaplotypeScore=349.9955;InbreedingCoeff=0.9381;MQ=53.59;MQ0=3;MQRankSum=-13.678;QD=74.97;ReadPosRankSum=1.473;VQSLOD=3.5006;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:48:99:0,126,6688	1/1:3,7:17:14.69:1548,15,0	0/0:33,0:28:75.25:0,75,2943	0/0:24,0:18:36.08:0,36,1558	1/1:8,8:31:3.01:199,3,0	1/1:6,13:28:18.06:1328,18,0	1/1:7,12:34:12.04:1110,12,0	0/0:32,0:32:87.25:0,87,3324	0/0:37,0:37:99:0,102,5137	1/1:10,11:36:66.40:3509,66,0	1/1:0,6:9:3.48:37,3,0	0/0:43,0:43:99:0,111,5203	0/0:30,0:30:81.26:0,81,4192	0/0:35,0:35:96.33:0,96,4904	1/1:6,18:37:42.14:3045,42,0	1/1:6,15:35:35.96:3076,36,0	1/1:6,9:22:18.06:1843,18,0	1/1:10,6:23:15.05:1082,15,0	0/0:17,0:16:33.11:0,33,1388	0/0:22,0:22:57.16:0,57,2161	0/0:48,0:48:99:0,126,6307	0/0:18,0:18:48.15:0,48,2306	0/0:24,0:24:60.19:0,60,2817	0/0:48,0:48:99:0,132,6439	1/1:7,7:17:15.05:842,15,0	1/1:3,21:34:78.01:5972,78,0	1/1:2,21:31:21.07:1919,21,0	1/1:1,5:6:15.05:1553,15,0
chr10	17274268	.	CT	C	821.09	PASS	AB=0.968;AC=17;AF=0.304;AN=56;BaseQRankSum=7.711;DP=276;FS=143.159;HRun=2;HaplotypeScore=130.3206;InbreedingCoeff=-0.1747;MQ=50.34;MQ0=7;MQRankSum=-8.624;QD=5.86;ReadPosRankSum=-1.696;VQSLOD=0.1635;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:29.68:0,30,527	0/1:3,2:5:35.38:47,0,35	0/0:21,0:4:5.81:0,6,58	0/0:15,0:7:7.61:0,8,41	1/1:7,0:7:14.07:142,14,0	0/0:4,0:4:2.46:0,2,44	0/1:14,0:14:25.55:26,0,120	0/0:7,0:6:14.56:0,15,196	0/0:4,0:4:8.89:0,9,135	0/1:6,0:6:24.60:25,0,109	0/0:4,0:3:6.02:0,6,86	0/0:18,0:18:3.30:0,3,613	0/0:5,0:6:1.43:0,1,166	0/1:16,0:15:1.11:1,0,330	0/1:15,0:15:52.88:53,0,234	0/1:14,0:14:99:101,0,118	0/1:12,0:12:8.88:264,0,9	0/1:6,0:7:27.74:28,0,43	0/0:7,0:4:8.81:0,9,84	0/1:4,0:4:8.85:9,0,81	0/0:19,0:18:43.60:0,44,667	0/1:7,0:7:5.62:6,0,202	0/0:6,0:6:14.84:0,15,224	0/0:7,0:7:15.05:0,15,221	0/1:11,0:11:62.83:63,0,69	0/1:10,0:10:65.37:65,0,195	1/1:6,2:8:5.05:88,5,0	0/1:3,0:3:35.02:58,0,35
chr10	17274270	.	TC	T	1131.94	PASS	AB=0.849;AC=19;AF=0.339;AN=56;BaseQRankSum=7.908;DP=317;FS=180.901;HRun=2;HaplotypeScore=191.6385;InbreedingCoeff=-0.2328;MQ=47.73;MQ0=7;MQRankSum=-7.582;QD=5.60;ReadPosRankSum=-4.201;VQSLOD=-0.4333;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:16,1:17:14.35:14,0,472	0/1:5,0:5:20.39:20,0,38	0/0:19,0:4:5.38:0,5,53	0/1:16,1:7:0.74:1,0,3	1/1:7,3:10:4.30:80,4,0	0/0:6,0:6:6.48:0,6,54	0/1:7,8:15:43.72:44,0,116	0/0:9,0:7:15.14:0,15,191	0/1:8,0:8:12.33:12,0,155	0/1:7,1:8:62.09:62,0,112	0/0:4,0:3:6.02:0,6,87	0/0:20,0:20:26.07:0,26,605	0/0:7,0:7:7.84:0,8,173	0/1:19,0:18:2.41:2,0,313	0/1:10,5:15:92.34:92,0,225	0/1:8,6:14:99:114,0,117	0/1:11,8:18:4.94:316,0,5	0/1:3,5:8:35.30:95,0,35	0/0:9,0:5:5.63:0,6,57	0/0:5,0:5:6.03:0,6,90	0/0:21,1:21:41.27:0,41,649	0/0:7,0:7:10.07:0,10,220	0/0:6,0:6:14.96:0,15,225	0/1:7,1:8:14.10:14,0,204	0/1:7,5:12:62.79:105,0,63	0/1:14,1:15:99:178,0,182	1/1:7,2:9:3.25:113,3,0	0/1:3,0:3:20.43:20,0,36
chr10	17274282	.	T	TCTC	1797.45	PASS	AB=0.925;AC=20;AF=0.357;AN=56;BaseQRankSum=10.438;DP=331;FS=77.337;HRun=0;HaplotypeScore=214.5762;InbreedingCoeff=-0.6252;MQ=59.49;MQ0=4;MQRankSum=-7.762;QD=7.88;ReadPosRankSum=-2.673;VQSLOD=0.0332;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:15,0:16:46.82:47,0,440	0/0:5,0:5:7.87:0,8,72	0/0:20,0:10:7.27:0,7,129	0/0:23,0:10:0.29:0,0,54	0/1:8,2:10:62.53:127,0,63	0/1:10,1:10:29.48:159,0,29	0/1:7,1:9:87.86:88,0,141	0/1:12,0:10:34.04:34,0,375	0/1:10,0:10:29.01:29,0,134	0/1:10,3:13:99:217,0,139	0/1:10,0:8:39.71:40,0,141	0/1:14,0:16:28.22:28,0,473	0/0:9,0:9:3.57:0,4,211	0/1:18,0:19:26.72:27,0,399	0/1:14,0:14:99:105,0,329	0/1:10,0:10:50.71:51,0,209	0/1:4,8:11:44.93:178,0,45	0/1:4,0:4:43.43:48,0,43	0/1:6,0:3:43.61:46,0,44	0/0:5,0:5:5.89:0,6,105	0/0:21,0:21:44.09:0,44,684	0/0:11,0:11:4.26:0,4,294	0/0:6,0:6:11.69:0,12,210	0/1:10,0:10:10.88:11,0,238	0/1:7,1:8:46.75:47,0,109	0/1:15,6:21:99:427,0,206	0/1:10,2:12:36.70:204,0,37	0/1:5,0:5:36.33:36,0,43
chr10	17274283	.	C	CT	475.15	PASS	AB=0.922;AC=16;AF=0.286;AN=56;BaseQRankSum=8.850;DP=331;FS=99.598;HRun=1;HaplotypeScore=199.2837;InbreedingCoeff=-0.4370;MQ=60.96;MQ0=2;MQRankSum=-5.324;QD=2.36;ReadPosRankSum=-1.132;VQSLOD=-0.5775;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:14,2:16:24.94:25,0,358	0/0:5,0:5:7.46:0,7,56	0/1:21,0:10:52.02:52,0,114	0/0:26,0:11:12.80:0,13,90	0/1:10,0:10:15.65:16,0,36	0/1:11,0:10:45.31:49,0,45	0/1:11,0:11:23.32:23,0,115	0/1:10,2:11:29.19:29,0,303	0/1:6,4:10:43.93:44,0,110	0/1:13,0:13:15.63:16,0,158	0/0:10,0:8:8.24:0,8,126	0/1:15,1:16:28.87:29,0,405	0/1:8,1:9:28.42:28,0,151	0/1:17,2:19:27.57:28,0,306	0/0:14,0:14:8.05:0,8,281	0/0:9,0:9:13.96:0,14,208	0/1:11,0:11:40.84:41,0,52	0/1:3,1:4:30.13:39,0,30	0/1:4,2:3:32.93:75,0,33	0/0:5,0:5:6.06:0,6,84	0/0:19,2:20:45.90:0,46,579	0/0:12,0:12:12.08:0,12,253	0/0:6,0:6:12.04:0,12,167	0/0:7,2:9:17.52:0,18,219	0/0:8,0:8:10.59:0,11,99	0/1:20,0:20:97.23:97,0,181	0/1:12,0:12:40.19:40,0,88	0/0:5,0:5:6.48:0,6,56
chr10	17274294	.	T	TTC	1024.78	PASS	AB=0.922;AC=21;AF=0.375;AN=56;BaseQRankSum=2.010;DP=337;FS=11.333;HRun=0;HaplotypeScore=209.3052;InbreedingCoeff=0.0257;MQ=61.13;MQ0=2;MQRankSum=-4.183;QD=4.55;ReadPosRankSum=-0.813;VQSLOD=1.8709;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:13.38:0,13,110	0/1:3,0:4:1.43:3,0,1	0/1:22,0:11:46.08:46,0,72	0/1:28,0:12:17.78:18,0,28	0/1:11,0:12:6.75:7,0,26	0/1:10,2:11:5.61:100,0,6	0/1:9,3:12:23.82:133,0,24	0/0:9,0:9:15.05:0,15,183	0/0:10,0:10:10.86:0,11,75	0/1:16,0:16:21:21,0,41	0/1:9,0:12:8.76:9,0,19	0/0:13,0:13:14.13:0,14,208	0/1:9,0:9:0.83:1,0,70	0/0:19,0:19:4.82:0,5,213	1/1:7,7:14:17.79:344,18,0	1/1:10,4:13:13.10:222,13,0	0/1:11,0:11:26.48:26,0,30	1/1:3,1:4:6.29:58,6,0	0/1:8,0:6:1.27:1,0,65	0/0:6,0:6:2.08:0,2,36	0/0:17,0:16:20.90:0,21,227	0/0:11,0:11:9.52:0,10,126	0/0:4,0:4:9.03:0,9,108	0/0:8,0:8:2.53:0,3,133	1/1:8,2:10:12.25:132,12,0	0/1:23,1:23:48.25:48,0,66	0/1:9,0:10:14.02:19,0,14	0/0:3,0:3:5.36:0,5,22
chr10	17274302	.	CT	C	1054.46	PASS	AB=0.855;AC=16;AF=0.286;AN=56;BaseQRankSum=9.652;DP=339;FS=93.378;HRun=1;HaplotypeScore=186.9857;InbreedingCoeff=-0.4139;MQ=65.11;MQ0=2;MQRankSum=-3.934;QD=5.46;ReadPosRankSum=7.489;VQSLOD=-0.5773;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:9,0:10:90.58:91,0,157	0/1:3,1:4:1.29:1,0,36	0/0:20,0:11:29.59:0,30,290	0/0:32,0:15:25.15:0,25,243	0/1:9,4:13:78.54:82,0,79	0/1:10,1:10:38.60:54,0,39	0/1:11,1:12:23.22:23,0,110	0/0:9,0:9:24.04:0,24,336	0/1:9,0:9:61.39:61,0,70	0/1:10,7:17:99:182,0,218	0/1:13,1:12:44.31:44,0,132	0/0:12,1:13:21.25:0,21,412	0/1:7,0:8:15.48:15,0,196	0/1:16,0:18:99:101,0,408	0/0:18,0:17:21.27:0,21,210	0/0:15,0:14:23.40:0,23,195	0/1:2,9:11:23.57:163,0,24	0/0:4,0:4:8.85:0,9,87	0/1:6,0:6:27.11:27,0,86	0/0:7,1:8:9.10:0,9,112	0/1:13,0:13:68.12:68,0,370	0/0:10,0:10:1.27:0,1,222	0/0:5,0:5:9.03:0,9,144	0/0:7,0:7:5.38:0,5,185	0/1:9,1:10:5.91:6,0,73	0/1:18,10:26:99:219,0,316	0/1:6,2:8:66.91:67,0,105	0/0:5,0:5:11.86:0,12,126
chr10	17274313	.	TTC	T	260.37	PASS	AB=0.892;AC=11;AF=0.196;AN=56;BaseQRankSum=5.141;DP=304;FS=2.321;HRun=0;HaplotypeScore=187.3899;InbreedingCoeff=-0.1180;MQ=58.83;MQ0=1;MQRankSum=-2.175;QD=2.53;ReadPosRankSum=-0.211;VQSLOD=2.7973;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:9:7.70:0,8,139	0/1:5,0:5:21.54:22,0,37	0/0:13,0:8:13.44:0,13,101	0/0:23,0:10:0.53:0,1,156	0/1:10,1:13:1.42:1,0,37	0/0:11,0:11:8.51:0,9,121	0/0:12,0:12:3.28:0,3,27	0/0:8,0:7:19.20:0,19,318	0/0:8,0:8:2.58:0,3,66	0/0:16,0:17:24.89:0,25,347	0/0:12,0:12:19.98:0,20,163	0/0:9,0:9:19:0,19,289	0/0:5,0:5:3.19:0,3,68	0/1:15,0:17:22:22,0,306	0/1:15,2:17:46.86:47,0,266	0/1:13,1:13:41.30:41,0,163	0/0:11,0:11:17.64:0,18,256	0/0:4,0:4:8.36:0,8,130	0/0:7,0:7:4.17:0,4,146	0/1:5,1:6:32.51:33,0,104	0/0:10,0:10:9.66:0,10,315	0/1:5,4:9:76.04:76,0,95	0/0:5,0:5:9.03:0,9,180	0/0:7,0:7:8.63:0,9,239	1/1:8,0:8:11.46:97,11,0	0/0:25,1:25:22.94:0,23,377	0/1:8,0:8:26.38:26,0,68	0/1:3,2:5:36.92:37,0,69
chr10	17274316	.	C	CCTA	1565.16	PASS	AB=0.872;AC=22;AF=0.393;AN=56;BaseQRankSum=7.256;DP=284;FS=22.797;HRun=0;HaplotypeScore=179.8480;InbreedingCoeff=-0.5505;MQ=56.52;MQ0=1;MQRankSum=-2.963;QD=7.38;ReadPosRankSum=2.224;VQSLOD=1.6882;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:8,1:9:25.95:26,0,116	0/1:3,1:4:20.93:21,0,48	0/0:11,0:7:4.22:0,4,77	0/0:21,0:8:3.78:0,4,123	0/0:11,1:12:10.57:0,11,54	0/1:8,3:10:99:135,0,150	0/1:8,1:11:70.19:70,0,105	0/1:6,2:7:99:122,0,256	0/1:7,1:8:47.29:124,0,47	0/1:15,1:16:59.04:59,0,338	0/1:9,2:11:61.87:62,0,115	0/1:8,1:9:40.28:40,0,175	0/1:4,1:5:44.37:110,0,44	0/1:13,1:15:62.22:62,0,312	0/1:15,3:17:99:174,0,402	0/1:10,4:13:99:174,0,293	0/1:11,0:11:16.39:16,0,246	0/1:3,1:4:23.89:24,0,125	0/1:7,0:7:0.54:1,0,159	0/0:5,0:5:6.73:0,7,87	0/0:10,0:9:19.76:0,20,295	0/0:8,1:9:4.35:0,4,78	0/1:5,0:5:8.52:9,0,125	0/1:6,1:7:36.65:37,0,197	1/1:5,1:6:5.22:37,5,0	0/1:20,4:23:99:271,0,445	0/1:3,3:7:49.82:144,0,50	0/0:4,0:4:8.53:0,9,82
chr10	17274321	.	TCGC	T	558.99	PASS	AB=0.840;AC=19;AF=0.339;AN=56;BaseQRankSum=4.842;DP=232;FS=8.982;HRun=0;HaplotypeScore=156.8977;InbreedingCoeff=-0.2970;MQ=53.00;MQ0=1;MQRankSum=-1.448;QD=3.80;ReadPosRankSum=-0.160;VQSLOD=2.1611;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:6,1:7:5.09:39,0,5	0/0:2,1:3:5.96:0,6,45	0/0:7,0:5:5.98:0,6,64	0/0:13,0:6:8.15:0,8,111	0/0:9,1:10:10.14:0,10,44	0/1:6,3:9:39.93:90,0,40	0/1:8,1:9:26.39:26,0,45	0/1:5,2:6:91.75:92,0,96	1/1:7,1:8:3.98:31,4,0	0/0:11,1:12:12.85:0,13,242	0/1:7,2:9:10.72:11,0,74	0/1:6,0:6:16.05:16,0,68	0/1:4,1:5:12.81:46,0,13	0/1:13,1:14:17.32:17,0,148	0/1:11,2:14:29.22:29,0,191	0/1:8,3:11:98.41:98,0,169	0/0:10,0:10:14.56:0,15,181	0/1:3,1:4:6.67:7,0,117	0/1:4,0:4:7.79:8,0,40	0/0:3,0:4:5.68:0,6,39	0/0:10,0:9:2.98:0,3,132	0/0:4,1:9:14.84:0,15,99	0/0:4,0:4:5.75:0,6,47	0/1:4,1:5:10.72:11,0,11	1/1:5,0:5:1.42:3,1,0	0/1:18,4:21:99:129,0,363	0/1:3,2:5:52.64:56,0,53	0/0:2,0:3:4.26:0,4,66
chr10	17274322	.	CG	C	397.06	PASS	AB=0.843;AC=20;AF=0.357;AN=56;BaseQRankSum=3.399;DP=221;FS=5.853;HRun=1;HaplotypeScore=145.5065;InbreedingCoeff=-0.2346;MQ=53.94;MQ0=1;MQRankSum=-0.346;QD=3.18;ReadPosRankSum=-2.038;VQSLOD=-0.7438;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:3,3:7:2.39:46,0,2	0/1:3,0:3:9.35:9,0,20	0/0:7,0:5:5.98:0,6,47	0/0:9,2:6:9.64:0,10,116	0/0:8,1:9:3.79:0,4,11	0/1:9,0:9:15.83:17,0,16	0/1:7,0:9:4.97:5,0,26	0/1:7,0:6:20.09:28,0,20	1/1:4,3:8:8.03:69,8,0	0/0:10,0:10:10.01:0,10,126	0/0:8,0:9:2.84:0,3,43	0/1:4,1:5:24.79:25,0,35	0/1:2,3:5:4.41:48,0,4	0/1:10,4:14:66.44:77,0,66	0/1:12,1:12:31.76:32,0,75	0/1:11,0:10:4.90:5,0,96	0/0:9,0:9:14.87:0,15,107	0/0:4,0:4:4.15:0,4,45	0/1:2,1:3:18.89:30,0,19	0/1:3,1:4:2.40:2,0,27	0/1:7,3:9:37.89:75,0,38	0/0:8,1:9:0.22:0,0,43	0/0:2,0:3:5.78:0,6,33	0/1:3,2:5:10.32:58,0,10	1/1:5,0:5:2.33:8,2,0	0/0:22,0:21:24.15:0,24,228	0/1:4,0:5:6.46:6,0,31	0/1:2,0:2:0.76:1,0,28
chr10	17274999	.	TG	T	403.33	PASS	AB=0.940;AC=20;AF=0.357;AN=56;BaseQRankSum=10.199;DP=588;FS=23.169;HRun=10;HaplotypeScore=121.4587;InbreedingCoeff=0.5177;MQ=78.29;MQ0=0;MQRankSum=-0.423;QD=1.89;ReadPosRankSum=2.624;VQSLOD=-0.2964;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,2:35:37:0,37,575	1/1:7,0:7:8.64:28,9,0	0/1:21,0:21:5.35:5,0,218	0/0:18,0:18:0.86:0,1,257	1/1:15,0:15:12.70:52,13,0	0/0:13,0:13:28.72:0,29,115	0/0:42,0:42:82.95:0,83,341	0/0:23,0:23:36.08:0,36,388	0/0:23,0:23:57.14:0,57,620	1/1:20,0:20:27.58:111,28,0	1/1:9,0:9:8.36:27,8,0	0/0:18,2:20:13.04:0,13,363	0/1:14,2:16:13.02:13,0,311	0/0:20,0:20:42.05:0,42,422	0/0:19,0:19:41.77:0,42,167	0/0:19,0:19:44.57:0,45,184	1/1:27,0:27:34.64:125,35,0	0/0:37,0:37:67.59:0,68,269	0/0:16,1:17:12.99:0,13,341	0/1:12,1:13:8.02:8,0,140	0/0:36,2:38:46.03:0,46,704	0/1:13,2:15:31.05:31,0,145	0/1:14,1:15:5.01:5,0,169	0/0:25,0:25:54.09:0,54,575	0/0:24,0:24:59.81:0,60,239	1/1:25,0:25:21.86:122,22,0	1/1:24,0:24:14.45:59,14,0	0/1:5,0:5:9.22:9,0,19
chr10	17275007	.	G	GC	3985.83	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=6.219;DP=562;FS=29.004;HRun=0;HaplotypeScore=107.2266;InbreedingCoeff=0.8977;MQ=77.36;MQ0=0;MQRankSum=0.931;QD=26.57;ReadPosRankSum=4.028;VQSLOD=2.2248;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:85.61:0,86,937	1/1:0,7:7:12.04:153,12,0	0/0:19,0:19:12.07:0,12,331	0/0:20,0:18:36.19:0,36,404	1/1:3,13:16:36.06:431,36,0	0/0:14,0:14:13.99:0,14,45	0/0:41,0:41:43.63:0,44,168	0/0:28,0:28:81.14:0,81,893	0/0:22,0:22:60.18:0,60,815	1/1:0,15:16:44.87:562,45,0	1/1:1,6:7:12.04:151,12,0	0/0:19,0:19:53.64:0,54,629	0/0:17,0:17:47.95:0,48,564	0/0:21,0:21:57.07:0,57,631	0/0:19,0:19:22.03:0,22,75	0/0:19,0:19:24.96:0,25,80	1/1:2,27:29:75.24:969,75,0	0/0:32,0:32:47.15:0,47,149	0/0:19,0:19:47.95:0,48,553	0/0:11,0:11:32.70:0,33,337	0/0:32,0:32:84.27:0,84,1005	0/0:12,0:12:29.46:0,29,301	0/0:9,0:9:26.92:0,27,313	0/0:23,0:23:69.10:0,69,839	0/1:24,0:24:12.20:12,0,57	1/1:0,20:20:60.05:702,60,0	1/1:0,25:25:63.14:840,63,0	1/1:0,6:6:14.26:166,14,0
chr10	17275008	.	G	GC	8929.70	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=12.510;DP=558;FS=15.690;HRun=0;HaplotypeScore=91.3751;InbreedingCoeff=0.9589;MQ=76.91;MQ0=0;MQRankSum=-3.699;QD=32.35;ReadPosRankSum=7.395;VQSLOD=3.1795;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:81.86:0,82,907	1/1:6,0:6:12.04:154,12,0	0/0:19,0:18:2.05:0,2,254	0/0:22,0:19:34.21:0,34,392	1/1:14,0:14:39.06:461,39,0	1/1:0,14:14:33.11:457,33,0	1/1:1,39:40:72.80:1267,73,0	0/0:26,0:26:75.07:0,75,829	0/0:21,0:21:60.17:0,60,811	1/1:18,0:18:47.97:565,48,0	1/1:6,0:7:12.04:157,12,0	0/0:19,0:19:53.92:0,54,624	0/0:16,0:16:44.91:0,45,523	0/0:21,0:21:57.07:0,57,630	1/1:0,19:19:48.16:665,48,0	1/1:1,18:19:46.57:663,47,0	1/1:29,0:30:78.09:926,78,0	1/1:2,32:34:78.03:1084,78,0	0/0:20,0:20:53.91:0,54,590	0/0:11,0:11:32.84:0,33,334	0/0:31,0:31:84.51:0,85,1009	0/0:12,0:12:27.66:0,28,299	0/0:10,0:10:26.80:0,27,305	0/0:22,0:22:66.14:0,66,817	1/1:0,24:24:69.23:939,69,0	1/1:21,0:21:60.12:721,60,0	1/1:24,0:24:63.09:733,63,0	1/1:6,0:6:11.41:136,11,0
chr10	17275133	.	G	GGC	13092.66	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-14.406;DP=572;FS=5.967;HRun=0;HaplotypeScore=65.7143;InbreedingCoeff=0.9716;MQ=88.86;MQ0=1;MQRankSum=-2.550;QD=52.79;ReadPosRankSum=0.861;VQSLOD=5.1730;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,144,2300	1/1:1,3:4:12.04:239,12,0	0/0:22,0:23:66.08:0,66,926	0/0:22,0:23:44.99:0,45,644	1/1:0,11:12:30.03:562,30,0	1/1:0,13:14:36.12:704,36,0	1/1:0,19:21:51.18:1035,51,0	0/0:30,0:30:87.24:0,87,1300	0/0:20,0:20:60.20:0,60,973	1/1:1,17:19:57.15:1032,57,0	1/1:1,15:16:39.13:784,39,0	0/0:20,0:20:57.18:0,57,905	0/0:19,0:19:57.19:0,57,923	0/0:19,0:19:57.18:0,57,892	1/1:0,17:17:45.15:913,45,0	1/1:0,16:15:42.14:853,42,0	1/1:0,27:29:63.22:1279,63,0	1/1:0,32:31:90.31:1824,90,0	0/0:18,0:18:54.09:0,54,756	0/0:16,0:16:45.14:0,45,701	0/0:50,0:50:99:0,150,2409	0/0:8,0:8:24.08:0,24,390	0/0:16,0:16:48.16:0,48,782	0/0:13,0:13:39.09:0,39,584	1/1:1,21:22:57.20:1153,57,0	1/1:0,25:26:78.24:1500,78,0	1/1:0,19:19:57.20:1154,57,0	1/1:0,1:1:3.01:61,3,0
chr10	17275421	.	TA	T	6454.31	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=13.563;DP=568;FS=6.339;HRun=7;HaplotypeScore=57.5746;InbreedingCoeff=0.9847;MQ=74.78;MQ0=0;MQRankSum=-2.814;QD=24.08;ReadPosRankSum=1.626;VQSLOD=5.1503;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,150,1873	1/1:1,11:12:26.95:275,27,0	0/0:16,1:16:42.03:0,42,453	0/0:18,0:15:23.49:0,23,375	1/1:0,20:20:57.13:581,57,0	1/1:3,17:20:45.10:459,45,0	1/1:1,24:25:51.12:520,51,0	0/0:33,0:33:75.21:0,75,927	0/0:11,0:11:27.09:0,27,339	1/1:1,11:12:33.07:337,33,0	1/1:1,21:22:60.13:611,60,0	0/0:18,0:18:54.17:0,54,679	0/0:18,0:18:42.12:0,42,515	0/0:24,0:24:69.22:0,69,868	1/1:1,17:18:45.10:459,45,0	1/1:2,16:18:36.08:367,36,0	1/1:6,24:30:60.12:612,60,0	1/1:5,18:23:48.10:490,48,0	0/0:24,0:24:63.18:0,63,767	0/0:11,0:11:30.10:0,30,377	0/0:27,0:27:78.21:0,78,942	0/0:8,0:8:24.08:0,24,302	0/0:20,0:20:54.16:0,54,663	0/0:20,0:20:60.19:0,60,754	1/1:1,19:20:45.10:459,45,0	1/1:2,15:17:45.10:457,45,0	1/1:0,28:28:75.17:765,75,0	1/1:1,2:3:6.01:61,6,0
chr10	17276155	.	C	CCTTTTAAGTA	37367.99	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-6.245;DP=645;FS=0.622;HRun=0;HaplotypeScore=179.0529;InbreedingCoeff=0.9953;MQ=73.95;MQ0=0;MQRankSum=-20.326;QD=115.69;ReadPosRankSum=-0.866;VQSLOD=4.7157;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:96.32:0,96,3012	1/1:1,3:7:11.90:562,12,0	0/0:19,0:19:45.15:0,45,1391	0/0:15,0:15:41.97:0,42,1187	1/1:8,14:27:63.21:2439,63,0	1/1:15,11:26:69.18:2746,69,0	1/1:9,10:23:57.19:2518,57,0	0/0:28,0:27:78.25:0,78,2478	0/0:24,0:24:72.25:0,72,2384	1/1:10,17:30:87.77:3988,88,0	1/1:3,14:21:51.13:2091,51,0	0/0:27,0:27:81.28:0,81,2652	0/0:21,0:21:60.19:0,60,1839	0/0:18,0:18:54.19:0,54,1748	1/1:6,22:29:78.27:3740,78,0	1/1:16,12:30:75.26:3200,75,0	1/1:6,12:18:51.16:2315,51,0	1/1:3,5:10:24.08:1192,24,0	0/0:21,0:21:63.20:0,63,1791	0/0:24,0:24:72.23:0,72,2289	0/0:17,0:17:48.15:0,48,1479	0/0:22,0:22:66.21:0,66,2042	0/0:28,0:28:84.29:0,84,2781	0/0:25,0:25:75.24:0,75,2375	1/1:8,17:28:66.23:3119,66,0	1/1:15,16:31:90.31:3934,90,0	1/1:7,20:30:87.30:4076,87,0	1/1:3,7:11:30.08:1448,30,0
chr10	17276228	.	CA	C	8076.17	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=18.325;DP=616;FS=2.165;HRun=6;HaplotypeScore=105.6953;InbreedingCoeff=0.9986;MQ=70.59;MQ0=1;MQRankSum=-9.049;QD=28.04;ReadPosRankSum=5.068;VQSLOD=4.5691;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,99,1254	1/1:1,7:9:24.06:257,24,0	0/0:16,0:15:29.48:0,29,362	0/0:15,0:14:29.65:0,30,331	1/1:4,22:26:66.15:699,66,0	1/1:3,29:32:85.13:926,85,0	1/1:4,7:11:33:324,33,0	0/0:31,0:31:87.23:0,87,1056	0/0:18,0:18:42.14:0,42,550	1/1:7,20:27:66.12:696,66,0	1/1:3,13:16:42.10:445,42,0	0/0:28,0:28:72.21:0,72,918	0/0:21,0:21:63.19:0,63,804	0/0:24,0:24:66.15:0,66,788	1/1:6,11:17:33.08:353,33,0	1/1:4,23:27:69.17:740,69,0	1/1:0,17:17:51.13:546,51,0	1/1:0,7:7:21.05:225,21,0	0/0:24,0:24:69.18:0,69,863	0/0:29,0:29:72.22:0,72,933	0/0:13,0:13:33.11:0,33,434	0/0:23,0:23:63.20:0,63,828	0/0:24,0:24:63.18:0,63,791	0/0:25,0:25:75.20:0,75,965	1/1:3,26:29:71.97:741,72,0	1/1:1,25:26:75.19:803,75,0	1/1:2,33:35:99:1062,99,0	1/1:1,8:9:24.06:258,24,0
chr10	17276244	.	G	GT	3658.53	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=4.282;DP=624;FS=13.634;HRun=9;HaplotypeScore=114.9859;InbreedingCoeff=0.9095;MQ=70.87;MQ0=1;MQRankSum=-11.514;QD=24.89;ReadPosRankSum=-1.836;VQSLOD=2.0631;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:89.94:0,90,776	0/0:9,0:9:23.99:0,24,208	0/1:13,0:12:8.66:9,0,99	0/0:18,0:17:20.87:0,21,171	0/0:30,0:30:80.96:0,81,699	1/1:9,28:37:88.79:962,89,0	1/1:2,9:11:27.07:299,27,0	0/0:28,0:28:71.93:0,72,618	0/0:15,0:15:41.97:0,42,360	0/0:23,0:23:56.97:0,57,493	0/0:17,0:17:50.99:0,51,443	0/0:26,0:26:77.98:0,78,677	0/0:23,0:23:62.96:0,63,543	0/0:21,0:21:53.98:0,54,469	1/1:1,16:17:48.13:531,48,0	1/1:6,18:24:60.14:648,60,0	0/0:23,0:23:65.98:0,66,573	1/1:0,10:11:29.87:299,30,0	0/0:27,0:27:65.96:0,66,570	0/0:27,0:27:74.94:0,75,645	0/0:14,0:14:32.99:0,33,286	0/0:19,0:19:47.99:0,48,417	0/0:20,0:20:53.96:0,54,465	0/0:25,0:25:65.97:0,66,573	1/1:4,30:34:84.12:911,84,0	0/0:30,0:30:74.97:0,75,651	0/0:36,0:37:94.97:0,95,810	0/0:10,0:10:26.99:0,27,234
chr10	17276941	.	A	AT	7605.71	PASS	AC=28;AF=0.519;AN=54;BaseQRankSum=-9.294;DP=492;FS=2.912;HRun=8;HaplotypeScore=48.8367;InbreedingCoeff=0.9512;MQ=72.99;MQ0=2;MQRankSum=0.335;QD=26.88;ReadPosRankSum=3.464;VQSLOD=5.4545;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:48.03:0,48,439	1/1:3,7:10:18.05:204,18,0	0/0:37,0:17:8.76:0,9,187	0/0:32,0:17:8.66:0,9,101	1/1:3,28:31:80.73:800,81,0	1/1:3,15:18:39.12:450,39,0	1/1:2,4:6:11.95:121,12,0	0/0:26,0:26:69:0,69,624	0/0:9,0:9:17.98:0,18,159	1/1:6,20:26:60.17:682,60,0	1/1:1,22:23:63.17:713,63,0	0/0:3,0:3:9:0,9,82	0/0:13,0:13:35.99:0,36,320	0/0:10,0:10:30.02:0,30,275	1/1:1,11:12:24.07:277,24,0	1/1:2,13:15:27.08:312,27,0	1/1:1,16:17:36.11:415,36,0	1/1:4,17:21:60.18:687,60,0	0/0:20,0:20:44.24:0,44,391	0/0:15,0:15:36.01:0,36,329	0/0:4,0:4:6:0,6,55	./.	0/0:12,0:12:33:0,33,298	0/0:7,0:7:20.97:0,21,184	1/1:2,31:32:78.23:900,78,0	1/1:6,23:29:69.20:796,69,0	1/1:1,20:21:51.07:586,51,0	1/1:4,17:21:60.12:662,60,0
chr10	17277106	.	A	AGAGG	16833.06	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=3.798;DP=641;FS=3.228;HRun=0;HaplotypeScore=107.3149;InbreedingCoeff=0.9962;MQ=84.64;MQ0=0;MQRankSum=-1.876;QD=52.44;ReadPosRankSum=3.810;VQSLOD=6.1044;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,114,2034	1/1:10,0:10:21.03:386,21,0	0/0:16,0:16:19.14:0,19,634	0/0:28,0:28:65.80:0,66,1023	1/1:22,0:22:54.19:1108,54,0	1/1:3,19:22:48.16:1265,48,0	1/1:3,23:26:57.20:1503,57,0	0/0:35,0:35:90.22:0,90,1398	0/0:27,0:27:78.25:0,78,1403	1/1:34,0:34:81.28:1602,81,0	1/1:22,0:22:57.20:1152,57,0	0/0:25,0:25:66.21:0,66,1182	0/0:18,0:18:51.16:0,51,899	0/0:22,0:22:63.20:0,63,1120	1/1:2,29:33:78.27:2057,78,0	1/1:1,22:24:57.20:1505,57,0	1/1:13,0:13:33.07:624,33,0	1/1:5,12:17:30.10:791,30,0	0/0:22,0:22:63.21:0,63,1134	0/0:17,0:17:48.12:0,48,791	0/0:20,0:20:51.17:0,51,930	0/0:10,0:10:30.10:0,30,532	0/0:13,0:13:39.12:0,39,687	0/0:25,0:25:66.19:0,66,1178	1/1:5,24:29:66.23:1714,66,0	1/1:28,1:29:78.27:1518,78,0	1/1:32,0:31:63.22:1303,63,0	1/1:8,0:8:15.05:304,15,0
chr10	17277110	.	G	GGAGA	17553.88	PASS	AB=1.000;AC=27;AF=0.482;AN=56;BaseQRankSum=2.786;DP=649;FS=4.107;HRun=0;HaplotypeScore=108.6132;InbreedingCoeff=0.9397;MQ=84.70;MQ0=0;MQRankSum=-5.161;QD=54.52;ReadPosRankSum=4.286;VQSLOD=6.0346;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,117,2277	1/1:2,10:12:21.07:541,21,0	0/0:17,0:17:22.12:0,22,709	0/0:30,0:30:71.95:0,72,1281	1/1:1,20:23:54.19:1501,54,0	1/1:21,0:21:48.16:872,48,0	1/1:23,0:23:60.21:1088,60,0	0/0:38,0:38:99:0,105,1809	0/0:29,0:29:84.27:0,84,1598	1/1:6,29:36:93.31:2473,93,0	1/1:2,19:22:57.20:1573,57,0	0/0:24,0:24:69.23:0,69,1335	0/0:17,0:17:51.17:0,51,996	0/0:21,0:21:63.22:0,63,1247	1/1:32,0:32:54.29:1368,54,0	1/1:26,0:26:13.37:991,13,0	1/1:0,14:16:33.11:877,33,0	0/1:16,0:16:4.86:551,0,5	0/0:23,0:23:69.22:0,69,1304	0/0:16,0:16:48.16:0,48,923	0/0:21,0:21:57.15:0,57,1064	0/0:11,0:11:30.10:0,30,573	0/0:13,0:13:39.13:0,39,769	0/0:25,0:25:69.15:0,69,1262	1/1:26,0:26:46.30:1141,46,0	1/1:2,25:29:87.27:2257,87,0	1/1:4,24:31:72.20:1903,72,0	1/1:0,7:8:15.05:419,15,0
chr10	17278240	.	A	ATT	15951.52	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=2.945;DP=842;FS=2.198;HRun=7;HaplotypeScore=118.6400;InbreedingCoeff=0.9756;MQ=76.38;MQ0=1;MQRankSum=-1.243;QD=41.33;ReadPosRankSum=3.291;VQSLOD=3.5748;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,144,1650	1/1:3,2:5:3.01:49,3,0	0/0:23,0:22:50.98:0,51,586	0/0:20,0:21:44.37:0,44,454	1/1:2,21:23:66.14:1013,66,0	1/1:1,21:22:57.19:936,57,0	1/1:1,13:14:33.11:541,33,0	0/0:42,0:42:72.86:0,73,1075	0/0:30,0:30:75.19:0,75,863	1/1:2,42:44:99:2087,129,0	1/1:3,23:26:69.15:1053,69,0	0/0:42,0:42:99:0,114,1327	0/0:24,0:24:69.20:0,69,804	0/0:28,0:28:78.23:0,78,908	1/1:5,47:54:99:2117,129,0	1/1:4,37:42:95.30:1495,95,0	1/1:1,24:25:69.24:1132,69,0	1/1:2,19:21:54.15:858,54,0	0/0:23,0:23:62.67:0,63,708	0/0:42,0:42:99:0,108,1247	0/0:36,0:36:96.21:0,96,1092	0/0:25,0:25:69.11:0,69,784	0/0:25,0:25:54.11:0,54,622	0/0:42,0:42:99:0,120,1368	1/1:4,35:41:99:1674,102,0	1/1:2,31:34:96.29:1518,96,0	1/1:1,24:26:68.98:1132,69,0	1/1:0,7:8:21.07:345,21,0
chr10	17279458	.	A	AAGTT	21856.15	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-1.708;DP=679;FS=9.006;HRun=0;HaplotypeScore=113.9015;InbreedingCoeff=0.9998;MQ=82.42;MQ0=1;MQRankSum=-11.699;QD=69.17;ReadPosRankSum=3.155;VQSLOD=7.1671;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,114,2166	1/1:0,8:9:27.09:752,27,0	0/0:22,0:22:33.93:0,34,1039	0/0:20,0:20:51.06:0,51,837	1/1:1,18:21:57.02:1316,57,0	1/1:2,13:16:42.14:1172,42,0	1/1:2,17:23:51.17:1379,51,0	0/0:40,0:40:99:0,111,2139	0/0:22,0:22:63.19:0,63,1182	1/1:1,24:26:75.20:1930,75,0	1/1:2,23:28:75.02:1783,75,0	0/0:24,0:24:72.22:0,72,1358	0/0:21,0:21:63.22:0,63,1237	0/0:17,0:17:51.13:0,51,978	1/1:3,28:33:80.91:2184,81,0	1/1:2,19:21:47.88:1312,48,0	1/1:2,15:19:45.15:1257,45,0	1/1:1,19:21:51.18:1424,51,0	0/0:29,0:29:84.27:0,84,1620	0/0:30,0:30:90.27:0,90,1647	0/0:33,0:33:99:0,99,1867	0/0:21,0:21:63.19:0,63,1188	0/0:24,0:24:72.23:0,72,1387	0/0:20,0:20:60.18:0,60,1144	1/1:2,20:23:60.21:1670,60,0	1/1:0,28:31:93.28:2441,93,0	1/1:3,18:23:57.20:1576,57,0	1/1:1,19:20:60.21:1660,60,0
chr10	17279646	.	G	GCCAGTTTGGGTTTGGTTTTAAAA	53214.37	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=20.345;DP=692;FS=8.790;HRun=0;HaplotypeScore=448.1029;InbreedingCoeff=0.9957;MQ=76.18;MQ0=0;MQRankSum=-20.790;QD=162.24;ReadPosRankSum=3.588;VQSLOD=3.9702;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,117,5868	1/1:14,3:18:48.15:2636,48,0	0/0:21,0:21:53.54:0,54,2168	0/0:27,0:27:73.69:0,74,3003	1/1:25,1:26:66.70:3547,67,0	1/1:23,3:26:54.17:4220,54,0	1/1:22,0:23:63.20:3262,63,0	0/0:48,0:48:99:0,135,5888	0/0:15,0:15:45.15:0,45,2349	1/1:23,1:24:72.20:4778,72,0	1/1:33,2:35:96.32:4955,96,0	0/0:27,0:27:81.26:0,81,4269	0/0:29,0:29:72.25:0,72,3890	0/0:20,0:20:60.19:0,60,3262	1/1:31,2:33:96.32:5635,96,0	1/1:20,3:23:66.23:4589,66,0	1/1:18,2:20:57.17:4053,57,0	1/1:6,0:7:12.04:815,12,0	0/0:17,0:17:42.14:0,42,1966	0/0:25,0:25:75.24:0,75,3964	0/0:37,0:37:99:0,108,5451	0/0:14,0:14:39.11:0,39,1989	0/0:18,0:18:54.17:0,54,2577	0/0:25,0:25:75.26:0,75,4031	1/1:23,2:25:75.26:4602,75,0	1/1:34,1:36:99:4968,105,0	1/1:17,1:19:54.19:2743,54,0	1/1:8,3:13:30.10:2412,30,0
chr10	17279650	.	A	AG	4611.49	PASS	AB=0.660;AC=26;AF=0.464;AN=56;BaseQRankSum=12.625;DP=665;FS=1.750;HRun=0;HaplotypeScore=180.2401;InbreedingCoeff=0.8726;MQ=78.89;MQ0=0;MQRankSum=-14.993;QD=15.90;ReadPosRankSum=2.799;VQSLOD=6.3620;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,126,1759	1/1:5,8:14:17.93:306,18,0	0/0:22,0:22:54.16:0,54,815	0/0:31,0:31:75.96:0,76,954	0/1:13,8:21:13.17:13,0,16	1/1:6,17:23:18.66:293,19,0	1/1:11,9:21:26.34:360,26,0	0/0:51,0:51:99:0,150,2004	0/0:17,0:17:48.16:0,48,669	1/1:5,16:21:51.55:683,52,0	0/1:9,18:28:1.20:134,0,1	0/0:27,0:27:81.26:0,81,1115	0/0:28,0:28:78.25:0,78,1073	0/0:20,0:20:60.19:0,60,821	1/1:12,17:29:15.98:403,16,0	1/1:8,12:20:25.66:365,26,0	1/1:4,11:15:7.20:124,7,0	1/1:1,4:6:15.05:206,15,0	0/0:18,0:18:48.16:0,48,657	0/0:26,0:26:78.25:0,78,1075	0/0:36,0:36:99:0,108,1476	0/0:14,0:14:39.13:0,39,545	0/0:18,0:18:54.18:0,54,754	0/0:25,0:25:72.24:0,72,1006	1/1:15,12:27:20.06:410,20,0	1/1:18,14:34:61.97:668,62,0	1/1:10,8:19:17.77:251,18,0	1/1:3,8:12:30.29:396,30,0
chr10	17279652	.	TGC	T	4704.84	PASS	AB=0.748;AC=13;AF=0.232;AN=56;BaseQRankSum=16.017;DP=673;FS=3.184;HRun=0;HaplotypeScore=190.3278;InbreedingCoeff=-0.3032;MQ=78.45;MQ0=0;MQRankSum=-14.149;QD=16.06;ReadPosRankSum=4.193;VQSLOD=5.0226;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,129,2547	0/1:9,5:14:99:283,0,206	0/0:23,0:23:43.05:0,43,1283	0/0:30,0:31:80.18:0,80,1521	0/1:9,12:21:99:532,0,287	0/1:18,6:24:99:248,0,473	0/1:16,5:21:99:249,0,554	0/0:48,0:48:99:0,144,2801	0/0:18,0:18:54.19:0,54,1096	0/1:16,5:21:99:181,0,624	0/1:21,9:30:99:388,0,773	0/0:26,0:26:78.27:0,78,1549	0/0:26,0:26:78.27:0,78,1572	0/0:21,0:21:63.22:0,63,1244	0/1:17,12:29:99:507,0,643	0/1:13,8:21:99:364,0,449	0/1:15,4:19:99:208,0,292	0/0:6,0:6:15.05:0,15,241	0/0:17,0:17:48.16:0,48,964	0/0:26,0:26:78.27:0,78,1562	0/0:35,0:35:99:0,105,2049	0/0:15,0:15:45.15:0,45,872	0/0:18,0:18:54.18:0,54,1012	0/0:27,0:27:81.26:0,81,1592	0/1:15,12:27:99:488,0,472	0/1:17,17:34:99:764,0,602	0/1:10,9:19:99:399,0,268	0/1:11,2:13:93.91:94,0,359
chr10	17279671	.	A	AC	1610.36	PASS	AB=0.842;AC=13;AF=0.232;AN=56;BaseQRankSum=12.365;DP=751;FS=2.819;HRun=2;HaplotypeScore=194.2120;InbreedingCoeff=-0.3015;MQ=82.91;MQ0=0;MQRankSum=-9.597;QD=4.68;ReadPosRankSum=-0.394;VQSLOD=0.2549;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,105,1270	0/1:12,3:15:59.61:60,0,242	0/0:32,0:32:60.05:0,60,848	0/0:37,0:37:73.31:0,73,763	0/1:19,8:27:99:255,0,507	0/1:24,4:28:99:109,0,513	0/1:21,4:25:65.97:66,0,589	0/0:52,0:52:99:0,153,1829	0/0:24,0:24:66.21:0,66,815	0/1:24,2:26:13.45:13,0,722	0/1:29,6:35:80.56:81,0,813	0/0:28,0:28:84.25:0,84,1028	0/0:24,0:24:66.20:0,66,805	0/0:22,0:22:63.20:0,63,780	0/1:24,5:29:96.37:96,0,664	0/1:18,5:23:99:154,0,484	0/1:20,3:23:73.03:73,0,469	0/0:7,0:7:18.01:0,18,205	0/0:21,0:21:56.14:0,56,627	0/0:27,0:27:78.23:0,78,948	0/0:33,0:33:96.28:0,96,1166	0/0:18,0:18:51.15:0,51,613	0/0:17,0:17:51.12:0,51,614	0/0:29,0:29:81.22:0,81,976	0/1:26,5:31:99:136,0,635	0/1:27,13:40:99:447,0,762	0/1:16,8:24:99:244,0,325	0/1:16,2:18:31.24:31,0,465
chr10	17280296	.	G	GA	8638.77	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-0.251;DP=613;FS=1.018;HRun=8;HaplotypeScore=66.2328;InbreedingCoeff=0.9911;MQ=87.45;MQ0=0;MQRankSum=-1.704;QD=28.51;ReadPosRankSum=2.652;VQSLOD=5.3565;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:93:0,93,842	1/1:1,10:11:27.08:312,27,0	0/0:23,0:23:50.04:0,50,443	0/0:21,0:21:49.12:0,49,396	1/1:4,22:26:66.20:761,66,0	1/1:0,19:18:51.15:588,51,0	1/1:4,21:25:57.17:656,57,0	0/0:24,0:24:56.99:0,57,512	0/0:25,0:25:63:0,63,571	1/1:0,18:18:54.16:623,54,0	1/1:2,9:11:27.07:305,27,0	0/0:15,0:15:39.01:0,39,357	0/0:15,0:15:45.02:0,45,412	0/0:21,0:21:62.99:0,63,562	1/1:2,21:23:54.16:623,54,0	1/1:1,17:18:51.15:588,51,0	1/1:3,27:30:75.22:866,75,0	1/1:5,30:35:81.20:920,81,0	0/0:31,0:31:72.03:0,72,658	0/0:21,0:21:54.01:0,54,489	0/0:16,0:16:45.01:0,45,406	0/0:22,0:22:56.99:0,57,514	0/0:21,0:21:50.99:0,51,457	0/0:16,0:16:39.01:0,39,357	1/1:1,15:16:39.10:440,39,0	1/1:5,27:32:84.24:960,84,0	1/1:3,19:21:57.12:642,57,0	1/1:5,12:17:8.64:353,9,0
chr10	17283845	.	AAAACAAAC	A	11421.59	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=12.737;DP=890;FS=0.341;HRun=0;HaplotypeScore=249.8469;InbreedingCoeff=0.9619;MQ=62.45;MQ0=3;MQRankSum=-12.743;QD=27.07;ReadPosRankSum=-1.924;VQSLOD=4.0155;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,120,4554	1/1:2,22:24:54.10:1331,54,0	0/0:30,0:27:27.09:0,27,560	0/0:37,0:31:18.05:0,18,442	1/1:13,26:39:59.89:1017,60,0	1/1:26,0:26:36.12:768,36,0	1/1:29,0:29:6.02:139,6,0	0/0:21,0:29:32.93:0,33,289	0/0:30,0:30:60.15:0,60,1929	1/1:7,24:31:30.75:1161,31,0	1/1:9,14:23:32.85:488,33,0	0/0:35,0:35:84.27:0,84,3010	0/0:45,0:45:99:0,105,3769	0/0:21,0:21:42.14:0,42,1486	1/1:46,0:46:62.83:1321,63,0	1/1:31,0:31:32.98:706,33,0	1/1:12,21:33:24:488,24,0	1/1:19,0:19:14.88:246,15,0	0/0:16,0:28:41.94:0,42,372	0/0:7,1:36:10.79:0,11,676	0/0:14,0:38:53.88:0,54,439	0/0:22,0:22:45.15:0,45,1641	0/0:30,0:30:63.22:0,63,2346	0/0:37,0:37:84.29:0,84,3117	1/1:33,1:34:36.08:750,36,0	1/1:12,28:40:84.25:1749,84,0	1/1:12,19:31:45.15:1105,45,0	1/1:10,6:16:6.02:152,6,0
chr10	17283872	.	ACAAACAAAAACAAAAC	A	9895.21	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=8.953;DP=867;FS=22.558;HRun=0;HaplotypeScore=349.8233;InbreedingCoeff=0.4133;MQ=57.08;MQ0=6;MQRankSum=-11.188;QD=25.70;ReadPosRankSum=2.432;VQSLOD=2.1700;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:58:99:0,175,10163	0/1:28,0:28:76.11:76,0,1429	0/0:27,0:24:68.64:0,69,1650	0/0:36,0:26:72.22:0,72,2196	0/1:35,0:35:99:348,0,1832	1/1:0,29:29:36.12:1698,36,0	1/1:0,25:25:6.02:256,6,0	0/0:33,0:33:90.63:0,91,2638	0/0:28,0:28:81.22:0,81,4212	0/1:34,0:33:99:235,0,1739	0/1:21,0:21:99:108,0,1338	0/0:35,0:35:99:0,105,5764	0/0:39,0:39:99:0,117,7198	0/0:27,0:27:81.28:0,81,4156	1/1:0,47:47:63.05:2905,63,0	1/1:0,31:31:32.97:1541,33,0	0/1:30,0:30:99:113,0,1053	1/1:2,12:14:15.05:499,15,0	0/0:27,0:26:72.20:0,72,2390	0/0:39,0:39:99:0,117,4482	0/0:33,0:32:70.45:0,70,2768	0/0:21,0:21:63.22:0,63,3639	0/0:30,0:30:87.30:0,87,4973	0/0:41,0:41:99:0,123,6961	1/1:2,27:29:36.12:1663,36,0	0/1:34,0:34:99:407,0,1454	0/1:28,0:28:46.76:47,0,1426	0/0:7,0:7:9.03:0,9,199
chr10	17289890	.	G	GAAA	4773.30	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=5.624;DP=517;FS=5.520;HRun=10;HaplotypeScore=77.9848;InbreedingCoeff=0.9842;MQ=60.14;MQ0=4;MQRankSum=0.241;QD=20.49;ReadPosRankSum=1.770;VQSLOD=2.9930;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:38:99:0,99,1158	1/1:0,0:7:14.92:111,15,0	0/0:18,0:7:17.98:0,18,196	0/0:16,0:12:23.31:0,23,218	1/1:7,1:30:72.79:584,73,0	1/1:9,10:22:39.04:646,39,0	1/1:1,11:13:33.09:595,33,0	0/0:23,0:22:45.03:0,45,517	0/0:19,0:19:44.73:0,45,496	1/1:6,0:18:29.25:201,29,0	1/1:5,0:16:32.82:245,33,0	0/0:17,0:17:36.07:0,36,424	0/0:23,0:23:31.55:0,32,650	0/0:25,0:26:72.11:0,72,844	1/1:3,12:17:24.08:446,24,0	1/1:8,8:17:24.06:427,24,0	1/1:2,0:22:50.81:389,51,0	1/1:5,9:16:20.93:269,21,0	0/0:22,0:23:53.74:0,54,659	0/0:18,0:18:48.11:0,48,581	0/0:11,0:10:27.08:0,27,327	0/0:16,0:16:42.10:0,42,504	0/0:13,0:13:30.06:0,30,364	0/0:22,0:22:54.13:0,54,644	1/1:4,6:9:15.05:288,15,0	1/1:1,0:15:41.83:321,42,0	1/1:6,0:21:23.91:183,24,0	1/1:1,0:9:8.97:68,9,0
chr10	17290592	.	T	TTCTCTCTC	1408.70	PASS	AB=0.941;AC=26;AF=0.464;AN=56;BaseQRankSum=3.473;DP=349;FS=2.587;HRun=0;HaplotypeScore=115.9033;InbreedingCoeff=0.4392;MQ=46.86;MQ0=31;MQRankSum=-2.617;QD=9.78;ReadPosRankSum=-1.988;VQSLOD=1.9638;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:13.37:0,13,137	1/1:9,0:9:10.46:125,10,0	0/0:31,0:3:3.01:0,3,35	0/0:44,0:13:16.49:0,16,363	0/1:5,5:11:0:0,0,0	1/1:14,0:11:2.50:37,3,0	1/1:8,0:6:6.02:143,6,0	0/0:28,0:24:54.14:0,54,1162	0/1:16,0:16:56.55:57,0,74	1/1:4,0:4:5.77:124,6,0	0/1:16,0:15:10.01:68,0,10	0/1:12,0:12:7.14:7,0,141	0/0:11,0:10:4.21:0,4,73	0/0:5,0:5:6.02:0,6,74	1/1:10,0:10:7.86:76,8,0	0/1:4,0:4:1.60:20,0,2	1/1:4,0:4:5.97:120,6,0	1/1:5,0:5:8.95:175,9,0	0/0:13,0:7:15.01:0,15,358	0/0:15,0:15:29.48:0,29,725	0/0:11,0:9:20.96:0,21,452	0/0:15,0:14:8.19:0,8,153	0/0:8,0:7:9.42:0,9,104	0/0:14,0:14:16:0,16,198	0/1:15,0:15:15.41:89,0,15	1/1:10,0:8:14.85:279,15,0	1/1:2,0:4:1.12:170,1,0	1/1:2,0:2:5.99:97,6,0
chr10	17290942	.	TA	T	8917.27	PASS	AB=0.600;AC=49;AF=0.907;AN=54;BaseQRankSum=2.232;DP=371;FS=3.545;HRun=1;HaplotypeScore=352.1039;InbreedingCoeff=0.5936;MQ=25.48;MQ0=79;MQRankSum=2.403;QD=26.86;ReadPosRankSum=2.800;VQSLOD=3.5289;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:2,4:4:0.15:99,0,0	1/1:0,10:11:30.09:368,30,0	0/0:20,0:2:6.02:0,6,79	0/0:18,0:2:3.01:0,3,48	1/1:1,27:27:35.87:391,36,0	1/1:3,6:6:18.06:222,18,0	1/1:2,12:12:34.18:386,34,0	1/1:3,9:9:27.08:334,27,0	1/1:4,18:18:54.17:668,54,0	1/1:3,20:20:60.19:736,60,0	1/1:0,12:12:31.72:344,32,0	1/1:2,12:12:36.11:445,36,0	1/1:2,11:11:33.10:408,33,0	1/1:1,8:8:24.08:297,24,0	1/1:1,14:14:42.13:520,42,0	1/1:2,8:8:24.08:297,24,0	1/1:4,6:6:12.04:148,12,0	1/1:4,3:3:6.02:74,6,0	1/1:4,4:4:12.02:135,12,0	1/1:0,19:19:32.63:402,33,0	1/1:6,3:3:3.01:38,3,0	1/1:0,11:11:29.30:335,29,0	1/1:0,13:13:32.88:364,33,0	./.	1/1:0,12:12:36.11:433,36,0	1/1:1,17:17:51.16:632,51,0	1/1:2,16:16:48.13:580,48,0	1/1:1,8:8:21.07:260,21,0
chr10	17290970	.	GA	G	3002.21	PASS	AB=0.667;AC=45;AF=0.865;AN=52;BaseQRankSum=4.552;DP=202;FS=16.398;HRun=1;HaplotypeScore=251.1349;InbreedingCoeff=0.5364;MQ=35.46;MQ0=46;MQRankSum=0.236;QD=17.98;ReadPosRankSum=4.921;VQSLOD=0.8814;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:2,2:2:6.18:20,0,6	1/1:2,7:9:20.60:176,21,0	0/0:13,0:4:9.03:0,9,105	0/0:11,0:3:5.99:0,6,69	1/1:1,13:14:19.51:202,20,0	1/1:2,3:3:9:78,9,0	1/1:1,4:4:6.72:50,7,0	./.	1/1:2,11:11:32.96:276,33,0	1/1:2,7:7:21.02:195,21,0	1/1:1,6:7:14.50:110,14,0	1/1:1,9:9:26.99:230,27,0	1/1:2,8:9:15.18:199,15,0	1/1:2,1:2:5.99:50,6,0	1/1:1,8:8:23.99:204,24,0	1/1:2,4:4:11.99:100,12,0	1/1:2,3:3:8.99:74,9,0	1/1:1,1:1:3:27,3,0	1/1:4,3:3:9.01:85,9,0	1/1:1,9:10:18.76:181,19,0	0/0:4,2:2:0.89:0,1,2	1/1:0,6:6:18.01:160,18,0	1/1:0,8:8:22.46:173,22,0	1/1:0,1:1:0.89:2,1,0	1/1:0,4:4:11.94:96,12,0	1/1:1,8:8:24.02:217,24,0	1/1:2,9:9:26.73:216,27,0	./.
chr10	17290982	.	GCA	G	2325.47	PASS	AB=0.667;AC=45;AF=0.865;AN=52;BaseQRankSum=4.795;DP=181;FS=13.334;HRun=0;HaplotypeScore=253.9908;InbreedingCoeff=0.4604;MQ=37.06;MQ0=32;MQRankSum=-1.478;QD=14.63;ReadPosRankSum=4.284;VQSLOD=2.1751;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:2,2:2:6.07:16,0,6	1/1:0,7:7:20.79:145,21,0	0/0:10,0:4:6.02:0,6,94	0/0:8,0:1:3.01:0,3,49	1/1:0,14:14:20.33:156,20,0	1/1:2,3:3:8.91:63,9,0	1/1:1,4:4:7.39:39,7,0	./.	1/1:2,10:11:31.96:205,32,0	1/1:1,7:7:20.96:173,21,0	1/1:0,6:6:14.31:90,14,0	1/1:1,9:9:24.64:165,25,0	1/1:1,8:8:23.64:165,24,0	1/1:1,2:2:5.96:43,6,0	1/1:1,8:8:23.75:163,24,0	1/1:1,4:4:11.84:80,12,0	1/1:1,3:3:8.92:61,9,0	1/1:1,1:1:2.98:22,3,0	1/1:3,3:3:9:77,9,0	1/1:0,9:9:3.90:123,4,0	1/1:2,2:3:1.82:5,2,0	1/1:0,6:6:17.73:115,18,0	1/1:0,8:8:18.41:106,18,0	0/0:0,1:1:1.25:0,1,3	1/1:0,4:4:11.77:76,12,0	1/1:1,8:8:23.82:178,24,0	1/1:1,9:9:26.33:175,26,0	./.
chr10	17291619	.	GT	G	1110.60	PASS	AB=1.000;AC=25;AF=0.446;AN=56;BaseQRankSum=18.105;DP=605;FS=5.996;HRun=1;HaplotypeScore=113.7303;InbreedingCoeff=0.7206;MQ=78.42;MQ0=3;MQRankSum=-1.612;QD=3.69;ReadPosRankSum=4.827;VQSLOD=0.5195;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,1:23:31.77:0,32,864	1/1:7,0:7:15.95:53,16,0	0/0:35,0:23:27.92:0,28,476	0/0:28,1:23:12.19:0,12,427	1/1:30,2:32:51.37:236,51,0	1/1:30,0:30:18.79:104,19,0	0/1:22,0:22:32.76:48,0,33	0/0:29,0:29:78.18:0,78,993	0/0:16,0:16:47.35:0,47,612	1/1:26,0:26:10.62:71,11,0	1/1:15,0:15:1.11:49,1,0	0/0:22,0:22:63.12:0,63,775	0/0:17,0:17:51.14:0,51,666	0/0:19,0:19:57.18:0,57,776	0/1:23,0:23:45.05:45,0,56	1/1:26,0:26:3.59:99,4,0	1/1:28,0:28:35.75:137,36,0	1/1:11,0:11:22.44:66,22,0	0/0:20,0:20:60.18:0,60,796	0/0:27,0:27:81.13:0,81,1093	0/0:18,0:18:48.06:0,48,610	0/0:15,0:15:44.35:0,44,573	0/0:16,0:16:48.10:0,48,629	0/0:18,0:18:54.11:0,54,665	1/1:14,0:14:24.34:68,24,0	1/1:23,1:24:14.10:100,14,0	1/1:39,0:39:55.25:233,55,0	0/1:4,0:4:11:12,0,11
chr10	17291620	.	TG	T	7786.56	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=14.911;DP=598;FS=2.274;HRun=7;HaplotypeScore=90.8715;InbreedingCoeff=0.9906;MQ=79.28;MQ0=3;MQRankSum=-0.134;QD=26.22;ReadPosRankSum=3.211;VQSLOD=5.3945;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:48.63:0,49,775	1/1:0,7:7:21.05:214,21,0	0/0:36,0:24:31.26:0,31,467	0/0:28,1:23:20.07:0,20,416	1/1:4,28:32:93.21:946,93,0	1/1:2,28:30:63.14:643,63,0	1/1:2,19:21:45.10:459,45,0	0/0:27,0:27:66.17:0,66,811	0/0:16,0:16:45.14:0,45,557	1/1:1,25:26:75.15:757,75,0	1/1:0,14:14:33.07:337,33,0	0/0:22,0:22:63.19:0,63,777	0/0:16,0:16:48.15:0,48,603	0/0:19,0:19:57.18:0,57,713	1/1:3,19:22:45.10:459,45,0	1/1:2,24:26:66.15:672,66,0	1/1:0,27:27:75.17:764,75,0	1/1:0,11:11:33.08:337,33,0	0/0:20,0:20:54.17:0,54,679	0/0:27,0:27:78.24:0,78,967	0/0:17,0:17:42.12:0,42,515	0/0:15,0:15:45.14:0,45,560	0/0:16,0:16:42.13:0,42,528	0/0:18,0:18:54.17:0,54,678	1/1:0,14:14:36.08:367,36,0	1/1:2,22:24:69.15:702,69,0	1/1:1,38:39:99:1039,102,0	1/1:1,3:4:9.02:92,9,0
chr10	17293289	.	TA	T	2075.10	PASS	AB=0.947;AC=13;AF=0.232;AN=56;BaseQRankSum=8.585;DP=564;FS=3.897;HRun=10;HaplotypeScore=55.5573;InbreedingCoeff=0.9335;MQ=66.59;MQ0=3;MQRankSum=-0.011;QD=14.93;ReadPosRankSum=2.310;VQSLOD=3.9761;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,102,1109	0/0:8,0:8:15.04:0,15,166	0/1:17,1:14:1.74:2,0,175	0/0:18,0:13:23.92:0,24,235	0/0:26,0:26:69.17:0,69,754	1/1:2,16:18:41.98:365,42,0	1/1:3,21:24:44.97:390,45,0	0/0:27,0:26:66.18:0,66,730	0/0:20,0:20:42.11:0,42,465	0/0:16,0:16:45.12:0,45,498	0/0:16,0:16:20.21:0,20,403	0/0:18,0:18:51.13:0,51,557	0/0:14,0:14:30.08:0,30,332	0/0:20,0:20:42.02:0,42,440	1/1:1,18:19:47.99:417,48,0	1/1:3,15:18:41.97:360,42,0	0/0:30,0:30:84.21:0,84,920	1/1:7,19:26:53.98:469,54,0	0/0:24,0:24:50.95:0,51,534	0/0:16,0:17:47.90:0,48,486	0/0:20,0:20:45.09:0,45,479	0/0:19,0:19:51.09:0,51,547	0/0:21,0:21:48.11:0,48,521	0/0:25,0:25:65.85:0,66,708	1/1:4,12:16:29.99:260,30,0	0/0:24,0:24:60.10:0,60,649	0/0:16,0:15:24.29:0,24,352	0/0:9,0:9:27.07:0,27,298
chr10	17293404	.	AGCT	A	153.62	PASS	AB=0.899;AC=9;AF=0.161;AN=56;BaseQRankSum=3.630;DP=504;FS=9.861;HRun=0;HaplotypeScore=93.3730;InbreedingCoeff=-0.1777;MQ=61.50;MQ0=6;MQRankSum=-4.350;QD=1.14;ReadPosRankSum=-3.753;VQSLOD=-0.3658;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:45:99:0,129,2381	0/0:6,0:6:17.53:0,18,219	0/1:14,0:8:2.12:2,0,172	0/0:20,0:10:10.77:0,11,374	0/1:16,1:16:17.61:18,0,395	0/1:13,1:13:16.96:17,0,352	0/1:16,1:16:4.04:4,0,283	0/0:36,0:36:98.12:0,98,1856	0/0:18,0:18:51.09:0,51,895	0/1:12,1:13:14.92:15,0,448	0/0:11,0:10:21.07:0,21,313	0/0:10,0:10:30.10:0,30,509	0/0:16,0:16:45.15:0,45,835	0/0:15,0:15:38.75:0,39,663	0/1:8,4:11:55.61:56,0,304	0/1:10,2:11:26.90:27,0,337	0/1:17,1:18:8.59:9,0,544	0/0:19,0:18:45.15:0,45,805	0/0:31,0:29:87.06:0,87,1515	0/0:21,0:21:60.20:0,60,1140	0/0:20,0:20:54.57:0,55,1023	0/0:17,0:17:31.94:0,32,813	0/0:19,0:19:57.19:0,57,1044	0/0:20,0:20:54.02:0,54,997	0/1:13,5:17:99:137,0,465	0/0:14,0:13:33.11:0,33,499	0/0:27,1:26:59.09:0,59,897	0/0:2,0:2:6.02:0,6,74
chr10	17293922	.	ACTTTCTTT	A	1425.81	PASS	AB=1.000;AC=29;AF=0.580;AN=50;BaseQRankSum=1.572;DP=527;FS=0.745;HRun=0;HaplotypeScore=139.7446;InbreedingCoeff=0.4568;MQ=62.90;MQ0=1;MQRankSum=-1.343;QD=4.44;ReadPosRankSum=-0.717;VQSLOD=2.5664;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:35:0.47:1,0,0	0/0:10,0:10:3.01:0,3,33	./.	./.	1/1:17,0:17:9.48:76,9,0	0/1:14,0:13:7.51:8,0,12	1/1:14,0:14:3.81:19,4,0	./.	0/0:21,0:21:24.07:0,24,591	1/1:21,0:21:23.95:267,24,0	0/0:18,0:18:11.07:0,11,223	1/1:11,10:21:9.03:220,9,0	0/0:27,0:27:0.34:0,0,106	1/1:8,7:15:9.03:221,9,0	0/1:21,0:20:18.98:29,0,19	1/1:11,0:11:2.04:6,2,0	0/1:20,0:20:4.07:52,0,4	0/0:18,0:18:5.84:0,6,47	1/1:23,0:22:15.05:204,15,0	0/0:21,0:21:18.05:0,18,249	0/1:15,0:15:3.35:46,0,3	1/1:7,7:14:8.06:153,8,0	0/0:18,0:18:15.04:0,15,374	0/0:15,0:21:9:0,9,170	0/1:9,0:9:1.52:2,0,6	1/1:26,0:26:21.54:193,22,0	1/1:28,0:27:10.77:61,11,0	1/1:16,0:16:5.84:33,6,0
chr10	17293962	.	T	TCC	1235.73	PASS	AB=0.800;AC=8;AF=0.154;AN=52;BaseQRankSum=2.457;DP=416;FS=4.910;HRun=1;HaplotypeScore=92.3426;InbreedingCoeff=0.4115;MQ=54.88;MQ0=11;MQRankSum=-3.700;QD=18.44;ReadPosRankSum=-0.543;VQSLOD=0.9857;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:27:39.11:0,39,569	0/0:5,0:5:9.03:0,9,137	./.	./.	0/0:17,0:17:42.14:0,42,612	1/1:7,5:11:7.17:335,7,0	0/1:9,4:13:16.98:160,0,17	0/0:25,0:13:27.56:0,28,404	0/0:15,0:15:45.15:0,45,688	0/0:19,0:19:54.18:0,54,812	0/0:10,0:10:30.10:0,30,447	0/0:19,0:19:36.02:0,36,476	0/0:16,0:16:48.16:0,48,696	0/0:12,0:12:23.95:0,24,252	0/1:12,4:16:19.64:356,0,20	0/1:5,1:6:28.01:43,0,28	0/0:14,0:14:42.14:0,42,623	1/1:8,5:13:18.05:326,18,0	0/0:15,0:14:39.59:0,40,538	0/0:15,0:15:42.14:0,42,629	0/0:12,0:12:23.40:0,23,482	0/0:19,0:19:45.08:0,45,638	0/0:11,0:11:33.11:0,33,505	0/0:24,0:24:57.14:0,57,804	0/1:5,2:7:5.74:155,0,6	0/0:23,0:23:69.23:0,69,972	0/0:30,0:30:30.10:0,30,428	0/0:17,0:16:24.08:0,24,344
chr10	17293980	.	TTTCC	T	4621.81	PASS	AB=0.928;AC=36;AF=0.643;AN=56;BaseQRankSum=7.840;DP=425;FS=1.433;HRun=0;HaplotypeScore=84.7824;InbreedingCoeff=0.3830;MQ=55.99;MQ0=8;MQRankSum=2.299;QD=14.22;ReadPosRankSum=0.590;VQSLOD=4.2989;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:25:18.72:0,19,260	0/1:0,7:7:2.25:58,0,2	0/0:13,0:6:14.86:0,15,107	0/1:13,0:2:17.98:31,0,18	1/1:0,18:18:41.61:385,42,0	1/1:10,0:10:16.53:183,17,0	1/1:11,0:11:30.36:245,30,0	0/1:27,0:18:24.99:230,0,25	0/0:12,0:12:36.01:0,36,437	1/1:4,14:18:7.91:318,8,0	0/1:11,1:12:38.94:169,0,39	0/1:21,0:21:2.39:2,0,190	0/1:16,0:16:35.12:35,0,192	0/1:12,0:12:12.94:13,0,107	1/1:13,0:13:32.51:268,33,0	1/1:7,0:7:8.85:101,9,0	1/1:11,2:13:30.31:340,30,0	1/1:9,0:9:10.56:114,11,0	1/1:16,0:16:47.75:408,48,0	0/1:12,0:12:44.06:156,0,44	1/1:9,0:9:12.31:170,12,0	0/0:17,0:17:12.96:0,13,219	0/0:8,0:8:24.01:0,24,313	0/0:24,0:24:21.07:0,21,456	1/1:9,0:9:18:195,18,0	1/1:2,27:29:77.96:920,78,0	1/1:0,29:29:8.75:169,9,0	1/1:2,12:13:6.02:113,6,0
chr10	17293984	.	CTTCT	C	2431	PASS	AB=1.000;AC=24;AF=0.429;AN=56;BaseQRankSum=5.554;DP=432;FS=0.580;HRun=0;HaplotypeScore=95.8903;InbreedingCoeff=0.5425;MQ=57.23;MQ0=4;MQRankSum=-0.232;QD=10.57;ReadPosRankSum=1.005;VQSLOD=2.5626;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:27:39.10:0,39,615	0/0:7,0:7:0.47:0,0,1	0/0:17,0:7:17.54:0,18,225	0/1:12,0:2:12.13:37,0,12	1/1:18,0:18:8.28:97,8,0	1/1:10,0:10:0.87:2,1,0	0/1:12,0:12:0.08:1,0,0	1/1:10,15:20:19.24:615,19,0	0/0:13,0:13:27.09:0,27,497	0/1:16,0:16:27.26:27,0,55	0/0:12,0:12:9.03:0,9,145	0/0:21,0:21:15.19:0,15,467	0/0:12,0:12:27.08:0,27,441	0/0:13,0:13:18.06:0,18,314	1/1:14,0:14:2.69:14,3,0	0/0:8,0:8:0:0,0,0	0/1:14,0:14:21.05:49,0,21	0/0:10,0:10:2.62:0,3,24	1/1:5,12:17:51.13:780,51,0	1/1:4,7:11:21.07:279,21,0	1/1:10,0:10:18.06:280,18,0	0/0:16,0:16:31.04:0,31,502	0/0:8,0:8:18.06:0,18,358	0/0:27,0:27:64.65:0,65,1036	0/0:10,0:10:3.13:0,3,29	1/1:27,0:27:22.68:276,23,0	1/1:30,0:30:0.78:89,1,0	1/1:13,0:12:6.02:67,6,0
chr10	17294248	.	C	CCTT	13628.52	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=4.386;DP=650;FS=0.688;HRun=0;HaplotypeScore=97.7670;InbreedingCoeff=0.9914;MQ=53.45;MQ0=23;MQRankSum=-6.286;QD=48.67;ReadPosRankSum=0.186;VQSLOD=6.7054;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:19:57.17:0,57,914	1/1:2,8:10:29.96:585,30,0	0/0:52,0:14:26.14:0,26,364	0/0:62,0:20:16.47:0,16,458	1/1:11,20:32:75.15:1388,75,0	1/1:7,12:18:51.13:996,51,0	1/1:16,8:24:62.17:930,62,0	0/0:25,0:24:47.95:0,48,556	0/0:25,0:25:75.19:0,75,1126	1/1:5,6:11:33.02:549,33,0	1/1:11,18:29:79.78:1496,80,0	0/0:21,0:21:60.16:0,60,917	0/0:25,0:25:69.15:0,69,1062	0/0:20,0:20:53.95:0,54,851	1/1:7,21:28:84.24:1751,84,0	1/1:10,13:22:66.13:1155,66,0	1/1:9,10:18:48.06:868,48,0	1/1:6,5:11:11.99:436,12,0	0/0:17,0:15:42.04:0,42,527	0/0:30,0:30:84.19:0,84,1210	0/0:10,0:9:24.05:0,24,355	0/0:20,0:20:57.12:0,57,879	0/0:18,0:18:54.17:0,54,857	0/0:21,0:21:63.14:0,63,897	1/1:4,11:14:42.13:857,42,0	1/1:10,12:19:57.02:1020,57,0	1/1:13,13:26:75.11:1252,75,0	1/1:0,11:11:15.05:345,15,0
chr10	17294276	.	CT	C	4719.03	PASS	AB=0.811;AC=28;AF=0.500;AN=56;BaseQRankSum=13.074;DP=713;FS=1.124;HRun=11;HaplotypeScore=112.4762;InbreedingCoeff=0.8257;MQ=65.65;MQ0=19;MQRankSum=-7.594;QD=13.44;ReadPosRankSum=2.892;VQSLOD=4.7851;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,1:24:34.20:0,34,568	1/1:2,7:10:23.01:178,23,0	0/1:79,4:39:17.95:18,0,458	0/0:82,3:26:7.78:0,8,146	1/1:7,22:30:58.91:467,59,0	1/1:4,16:21:45.99:356,46,0	1/1:4,18:23:52.95:421,53,0	0/0:16,0:16:30:0,30,285	0/0:25,1:27:40.65:0,41,652	1/1:1,13:16:43:327,43,0	1/1:4,15:22:57.21:433,57,0	0/0:18,1:20:22.57:0,23,461	0/0:25,4:29:28.92:0,29,711	0/0:27,1:29:50.04:0,50,692	1/1:10,17:27:34.06:381,34,0	1/1:2,20:23:55.01:430,55,0	1/1:2,12:14:32.95:271,33,0	1/1:4,8:13:12.67:187,13,0	0/0:18,0:17:45.05:0,45,454	0/0:21,2:24:10.68:0,11,496	0/0:16,1:16:17.46:0,17,391	0/0:22,0:22:57.09:0,57,579	0/0:18,1:19:5.41:0,5,245	0/0:28,2:31:35.08:0,35,746	1/1:3,14:16:44.91:366,45,0	1/1:3,16:19:46.95:375,47,0	1/1:4,21:25:59.89:490,60,0	0/1:1,1:2:11.82:19,0,12
chr10	17295566	.	CA	C	886.33	PASS	AB=0.917;AC=18;AF=0.321;AN=56;BaseQRankSum=1.399;DP=333;FS=17.223;HRun=10;HaplotypeScore=58.7155;InbreedingCoeff=0.7195;MQ=90.89;MQ0=7;MQRankSum=-2.772;QD=7.45;ReadPosRankSum=2.642;VQSLOD=0.4541;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:55.85:0,56,539	1/1:2,1:3:8.93:68,9,0	0/0:38,1:22:11.26:0,11,296	0/1:42,1:19:0.41:0,0,92	1/1:3,4:6:11.97:101,12,0	0/0:10,0:10:23.73:0,24,167	0/0:13,0:13:23.56:0,24,155	0/0:9,0:9:15.01:0,15,140	0/0:9,1:10:0.95:0,1,195	1/1:2,8:10:20.98:182,21,0	1/1:4,2:6:8.98:75,9,0	0/1:10,2:12:19.02:19,0,247	0/0:11,0:11:29.83:0,30,273	0/0:13,0:13:32.96:0,33,294	0/0:15,0:15:41.26:0,41,293	0/0:14,0:14:34.13:0,34,214	1/1:7,5:12:29.84:239,30,0	0/0:13,0:13:13.92:0,14,196	0/0:11,0:12:17.88:0,18,180	0/0:2,1:3:6.01:0,6,59	0/0:3,0:3:9.02:0,9,92	0/0:3,0:3:8.96:0,9,76	0/0:6,0:6:12.03:0,12,133	0/0:8,1:9:0.99:0,1,221	0/0:5,0:5:11.89:0,12,108	1/1:2,3:5:11.98:100,12,0	1/1:6,5:11:17.92:149,18,0	1/1:5,4:8:17.91:144,18,0
chr10	17295576	.	A	AG	1028.81	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=-0.912;DP=393;FS=7.115;HRun=8;HaplotypeScore=66.7716;InbreedingCoeff=0.6299;MQ=89.47;MQ0=12;MQRankSum=-2.033;QD=10.50;ReadPosRankSum=0.298;VQSLOD=1.9305;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:64.95:0,65,511	0/0:3,0:3:2.90:0,3,16	0/0:60,0:29:14.08:0,14,212	0/0:60,0:22:13.77:0,14,114	0/0:10,0:9:20.37:0,20,120	1/1:4,5:9:17.98:186,18,0	1/1:4,5:10:23.74:233,24,0	0/0:12,0:14:6.51:0,7,69	0/0:11,0:11:2.55:0,3,82	0/0:9,0:9:26.04:0,26,145	0/0:5,0:5:8.80:0,9,57	0/1:12,0:12:3.26:3,0,191	0/1:11,0:11:13.16:13,0,146	0/0:13,0:13:29.83:0,30,230	1/1:10,3:15:29.74:256,30,0	1/1:6,6:12:19.22:221,19,0	0/0:15,0:15:32.14:0,32,198	1/1:13,3:16:26.98:271,27,0	0/0:12,0:12:20.57:0,21,214	0/0:3,0:3:8.93:0,9,67	0/1:8,0:8:3.95:4,0,107	0/0:4,0:4:8.94:0,9,70	0/0:6,0:6:17.79:0,18,145	0/0:11,0:11:23.89:0,24,202	1/1:4,1:5:2.94:18,3,0	0/0:4,0:4:11.66:0,12,67	0/0:13,0:13:29.06:0,29,172	0/0:10,0:9:17.31:0,17,96
chr10	17295594	.	T	TA	2303.24	PASS	AB=0.757;AC=27;AF=0.482;AN=56;BaseQRankSum=-0.071;DP=401;FS=13.680;HRun=11;HaplotypeScore=59.8630;InbreedingCoeff=0.5087;MQ=82.71;MQ0=13;MQRankSum=-2.578;QD=9.07;ReadPosRankSum=1.150;VQSLOD=0.8649;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:30:76.71:0,77,584	1/1:0,3:3:6.01:61,6,0	0/1:51,0:21:17.32:17,0,95	0/1:58,0:21:41.92:52,0,42	1/1:2,9:10:20.09:162,20,0	0/1:3,5:8:25.42:131,0,25	1/1:4,7:12:20.88:197,21,0	0/0:5,0:21:28.50:0,28,83	0/0:10,0:10:17.91:0,18,139	0/1:3,8:11:16.41:207,0,16	1/1:3,2:5:5.97:50,6,0	0/0:14,0:15:25.88:0,26,189	0/0:8,0:8:20.91:0,21,163	0/1:9,1:10:0.52:1,0,179	1/1:2,7:9:18.03:177,18,0	1/1:6,7:13:18.01:175,18,0	1/1:4,12:17:35.91:349,36,0	1/1:2,6:10:23.88:226,24,0	0/0:1,0:12:22.40:0,22,65	0/0:3,0:8:11.07:0,11,32	0/0:2,0:10:15.19:0,15,55	0/0:6,0:6:17.93:0,18,139	0/0:11,0:11:26.83:0,27,202	0/0:16,0:16:32.85:0,33,255	0/1:1,3:4:14.22:52,0,14	1/1:1,5:6:15.03:152,15,0	0/1:4,6:10:5.20:134,0,5	1/1:1,12:15:38.75:363,39,0
chr10	17295819	.	TACTTTTAAAAGTC	T	8579.33	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=12.618;DP=418;FS=17.581;HRun=0;HaplotypeScore=153.2913;InbreedingCoeff=0.9551;MQ=66.19;MQ0=0;MQRankSum=-12.050;QD=82.49;ReadPosRankSum=2.641;VQSLOD=3.7072;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,120,7535	1/1:0,1:1:3.01:123,3,0	0/0:10,0:10:20.86:0,21,608	0/0:10,0:6:9.47:0,9,178	1/1:2,14:12:27.09:1103,27,0	0/0:11,0:11:27.09:0,27,1771	0/0:14,0:14:39.13:0,39,2513	0/0:18,0:18:54.19:0,54,3308	0/0:17,0:17:51.18:0,51,3047	1/1:1,13:14:30.10:1227,30,0	1/1:0,10:10:24.08:957,24,0	0/0:11,0:11:33.11:0,33,2016	0/0:10,0:10:30.09:0,30,1703	0/0:16,0:16:48.16:0,48,2886	0/0:12,0:12:36.12:0,36,2262	0/0:20,0:20:60.21:0,60,3856	1/1:3,14:17:36.12:1423,36,0	0/0:22,0:22:63.22:0,63,3915	0/0:23,0:23:69.23:0,69,3872	0/0:12,0:12:36.12:0,36,2384	0/0:16,0:16:48.16:0,48,3118	0/0:7,0:7:21.07:0,21,1391	0/0:16,0:16:45.15:0,45,2522	0/0:10,0:9:21.07:0,21,1277	0/0:18,0:18:54.19:0,54,3446	1/1:3,9:11:20.97:557,21,0	1/1:3,23:26:62.82:2577,63,0	1/1:0,8:7:15.05:613,15,0
chr10	17296427	.	GT	G	2774.77	PASS	AB=0.892;AC=23;AF=0.411;AN=56;BaseQRankSum=9.366;DP=797;FS=24.510;HRun=2;HaplotypeScore=172.7872;InbreedingCoeff=0.4323;MQ=51.17;MQ0=25;MQRankSum=-8.146;QD=7.67;ReadPosRankSum=-0.942;VQSLOD=-0.7638;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:40.57:0,41,539	1/1:12,1:13:11.79:139,12,0	0/0:43,0:16:47.90:0,48,569	0/0:54,0:25:59.38:0,59,705	1/1:11,5:16:12.38:220,12,0	1/1:24,6:28:7.78:257,8,0	0/1:23,4:27:12.46:144,0,12	0/0:40,2:42:41.45:0,41,634	0/0:31,0:31:89.50:0,89,1246	0/1:20,7:25:18:357,0,18	1/1:15,5:19:7.85:153,8,0	0/0:24,0:24:46.91:0,47,477	0/0:30,0:29:65.49:0,65,667	0/0:23,1:24:12.59:0,13,457	1/1:25,1:24:3.64:94,4,0	0/1:47,3:47:56.31:269,0,56	0/1:20,4:21:32.35:155,0,32	0/1:9,0:8:0.66:40,0,1	0/0:12,0:13:29.79:0,30,318	0/0:32,0:32:62.86:0,63,440	0/0:49,0:48:87.30:0,87,823	0/1:22,1:23:10.96:11,0,441	0/0:28,0:28:49.10:0,49,474	0/0:30,1:31:21.08:0,21,446	1/1:27,3:28:12.79:242,13,0	0/1:21,6:26:49.41:403,0,49	1/1:22,4:25:11.29:363,11,0	1/1:13,0:14:2.73:118,3,0
chr10	17296428	.	T	TTG	4441.43	PASS	AB=0.663;AC=39;AF=0.696;AN=56;BaseQRankSum=1.966;DP=810;FS=0.958;HRun=0;HaplotypeScore=181.5218;InbreedingCoeff=0.6188;MQ=51.33;MQ0=25;MQRankSum=-5.309;QD=8.16;ReadPosRankSum=2.313;VQSLOD=4.5770;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:17,12:35:45.16:257,0,45	1/1:7,0:13:11.63:94,12,0	0/0:43,0:16:13.64:0,14,150	0/0:55,0:25:17.27:0,17,147	1/1:13,0:16:0.17:38,0,0	1/1:22,0:28:21.98:119,22,0	1/1:20,0:28:11.28:44,11,0	0/0:18,0:41:56.02:0,56,260	0/0:30,0:31:60.01:0,60,675	1/1:23,0:26:27.75:147,28,0	1/1:18,0:19:2.97:25,3,0	1/1:10,12:26:31.13:424,31,0	1/1:13,15:29:0.31:514,0,0	0/1:10,13:25:36.54:353,0,37	1/1:20,0:26:16.20:98,16,0	1/1:33,0:47:34.35:193,34,0	1/1:13,0:21:14.96:97,15,0	1/1:3,0:8:5.34:18,5,0	0/0:9,0:13:12.74:0,13,56	0/0:11,0:33:45.49:0,45,226	0/0:23,0:49:42.61:0,43,210	0/1:15,11:26:4.88:323,0,5	1/1:8,19:28:26.56:421,27,0	1/1:9,21:31:38.92:608,39,0	1/1:22,0:28:16.25:106,16,0	1/1:19,0:26:28.50:186,28,0	1/1:13,0:25:45.92:315,46,0	1/1:10,0:14:9.21:59,9,0
chr10	17297107	.	CTT	C	3558.35	PASS	AB=0.654;AC=20;AF=0.357;AN=56;BaseQRankSum=0.261;DP=550;FS=6.005;HRun=13;HaplotypeScore=78.5250;InbreedingCoeff=0.6563;MQ=75.91;MQ0=0;MQRankSum=-0.866;QD=14.76;ReadPosRankSum=4.210;VQSLOD=2.6933;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:25:65.91:0,66,818	1/1:2,10:13:32.76:303,33,0	0/0:14,0:17:19.96:0,20,217	0/1:8,1:10:1.67:24,0,2	1/1:7,17:25:53.42:506,53,0	0/0:6,1:21:3.85:0,4,74	0/0:4,1:18:1.35:0,1,65	0/0:15,0:27:54.09:0,54,578	0/0:23,2:27:16.51:0,17,843	1/1:9,17:27:53.76:500,54,0	1/1:2,11:15:23.64:265,24,0	0/0:11,0:14:41.10:0,41,518	0/0:15,0:15:37.94:0,38,523	0/0:15,0:16:38.61:0,39,511	0/1:7,4:18:77.43:77,0,138	0/1:3,2:21:28.36:28,0,86	1/1:3,27:33:65.18:637,65,0	0/0:3,0:12:2.13:0,2,79	0/0:8,0:18:36.07:0,36,370	0/0:7,0:21:48.97:0,49,495	0/0:2,0:18:26.03:0,26,231	0/0:17,0:18:12.54:0,13,482	0/0:14,1:16:11.82:0,12,446	0/0:23,0:26:59.65:0,60,783	0/1:8,1:20:3.63:4,0,52	1/1:9,13:23:40.94:389,41,0	1/1:4,14:19:41.75:390,42,0	1/1:1,16:17:44.80:436,45,0
chr10	17298416	.	G	GGC	843.46	PASS	AB=1.000;AC=35;AF=0.972;AN=36;DP=84;FS=0.000;HRun=0;HaplotypeScore=67.7636;InbreedingCoeff=0.2040;MQ=31.30;MQ0=0;QD=10.16;VQSLOD=3.0866;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,5:8:17.95:146,18,0	./.	./.	./.	./.	./.	1/1:1,6:7:4.72:30,5,0	1/1:2,3:5:9.83:71,10,0	1/1:1,2:3:6:58,6,0	1/1:2,2:4:5.63:32,6,0	./.	0/1:1,0:1:0:0,0,0	./.	1/1:0,3:3:6:54,6,0	./.	1/1:0,1:1:2.99:24,3,0	1/1:0,9:9:11.98:98,12,0	1/1:3,4:7:10.62:64,11,0	1/1:1,1:2:5.96:44,6,0	./.	1/1:8,8:16:15.46:143,15,0	1/1:2,0:4:0.47:1,0,0	1/1:1,1:2:2.80:13,3,0	1/1:2,3:5:9.01:88,9,0	1/1:3,0:3:0.89:2,1,0	1/1:1,1:2:3.45:22,3,0	1/1:0,1:1:3:28,3,0	./.
chr10	17299628	.	GT	G	7239.85	PASS	AB=0.916;AC=38;AF=0.679;AN=56;BaseQRankSum=11.247;DP=717;FS=3.187;HRun=11;HaplotypeScore=86.7233;InbreedingCoeff=0.8585;MQ=70.76;MQ0=1;MQRankSum=-1.085;QD=14.03;ReadPosRankSum=0.267;VQSLOD=5.2133;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,2:29:31.88:0,32,728	1/1:7,16:23:44.88:369,45,0	0/1:18,1:15:4.77:5,0,157	0/1:13,1:12:3.26:3,0,145	1/1:7,25:32:80.84:658,81,0	1/1:5,25:30:68.91:566,69,0	1/1:2,19:23:55.01:431,55,0	1/1:2,0:28:54.86:168,55,0	0/0:29,1:30:56.55:0,57,799	1/1:6,20:28:32:448,32,0	1/1:7,14:23:23.19:331,23,0	0/0:18,3:21:4.82:0,5,449	0/0:29,0:29:50.52:0,51,722	0/0:14,0:14:39.08:0,39,408	1/1:6,31:37:51.89:633,52,0	1/1:4,32:36:48.92:608,49,0	1/1:6,10:16:32.94:268,33,0	1/1:4,14:21:36.99:345,37,0	1/1:11,0:31:12.35:100,12,0	1/1:4,0:28:46.84:135,47,0	1/1:2,0:20:32.59:94,33,0	0/0:20,0:21:47.27:0,47,530	0/0:32,1:34:48.12:0,48,881	0/0:23,0:23:60.15:0,60,640	1/1:3,19:22:56.77:457,57,0	1/1:11,28:39:60.87:703,61,0	1/1:7,28:36:91.92:745,92,0	1/1:1,7:9:20.97:172,21,0
chr10	17299711	.	AGT	A	7259.29	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=13.100;DP=643;FS=2.795;HRun=0;HaplotypeScore=82.0331;InbreedingCoeff=0.9998;MQ=90.96;MQ0=0;MQRankSum=-3.673;QD=38.82;ReadPosRankSum=4.411;VQSLOD=6.7541;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:75.26:0,75,1375	1/1:0,11:11:33.11:473,33,0	0/0:29,0:29:78.26:0,78,1374	0/0:24,0:24:63.13:0,63,1055	1/1:4,24:28:69.23:985,69,0	0/0:41,0:41:99:0,117,2145	0/0:14,0:14:42.14:0,42,764	0/0:28,0:28:81.28:0,81,1483	0/0:23,0:23:57.20:0,57,1044	1/1:1,29:30:87.29:1246,87,0	1/1:0,25:25:69.23:988,69,0	0/0:28,0:28:81.28:0,81,1479	0/0:23,0:23:69.23:0,69,1242	0/0:13,0:13:39.13:0,39,706	0/0:32,0:32:87.30:0,87,1582	0/0:25,0:25:72.23:0,72,1283	1/1:2,26:28:75.25:1075,75,0	0/0:15,0:15:45.15:0,45,825	0/0:16,0:16:48.16:0,48,873	0/0:35,0:35:99:0,102,1870	0/0:14,0:14:39.13:0,39,713	0/0:23,0:23:66.23:0,66,1201	0/0:20,0:20:51.17:0,51,935	0/0:13,0:13:36.12:0,36,660	0/0:14,0:14:42.14:0,42,770	1/1:1,25:26:75.25:1075,75,0	1/1:6,23:29:69.23:989,69,0	1/1:0,10:10:30.10:430,30,0
chr10	17300495	.	C	CTT	5621.13	PASS	AC=16;AF=0.296;AN=54;BaseQRankSum=7.909;DP=531;FS=2.429;HRun=7;HaplotypeScore=74.6308;InbreedingCoeff=0.9475;MQ=54.21;MQ0=29;MQRankSum=-2.436;QD=29.43;ReadPosRankSum=2.408;VQSLOD=4.8043;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:62.21:0,62,704	1/1:0,5:6:6.02:98,6,0	0/0:5,0:3:3.01:0,3,33	./.	1/1:5,30:35:74.65:1130,75,0	0/0:16,0:14:36.01:0,36,392	0/0:23,0:19:32.99:0,33,354	0/0:26,0:23:51.07:0,51,564	0/0:12,0:12:24.07:0,24,280	1/1:7,22:27:25.26:867,25,0	1/1:4,24:28:69.15:1055,69,0	0/0:17,0:17:44.97:0,45,489	0/0:18,0:18:45.11:0,45,512	0/0:16,0:16:36.08:0,36,409	0/0:15,0:14:30.08:0,30,349	0/0:17,0:15:39.10:0,39,444	1/1:3,21:22:33.11:541,33,0	0/0:19,0:16:33.07:0,33,371	0/0:14,0:13:30.08:0,30,349	0/0:23,0:22:54.12:0,54,599	0/0:9,0:8:18.01:0,18,187	0/0:6,0:5:15.03:0,15,164	0/0:27,0:25:72.11:0,72,788	0/0:20,0:19:37.19:0,37,467	0/0:25,0:24:51.12:0,51,582	1/1:5,19:23:57.18:893,57,0	1/1:6,17:22:25.78:592,26,0	1/1:8,12:17:27.09:443,27,0
chr10	17300795	.	CT	C	2190.33	PASS	AB=0.647;AC=46;AF=0.821;AN=56;BaseQRankSum=0.944;DP=514;FS=0.000;HRun=17;HaplotypeScore=62.1129;InbreedingCoeff=0.2177;MQ=69.89;MQ0=3;MQRankSum=1.531;QD=4.67;ReadPosRankSum=2.349;VQSLOD=1.0879;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,10:15:11.44:66,11,0	1/1:3,0:9:8.04:23,8,0	0/0:25,0:12:3.01:0,3,33	0/0:20,0:10:10.44:0,10,66	1/1:10,0:20:18.99:63,19,0	0/1:8,8:20:16.21:91,0,16	0/1:10,7:19:0.51:73,0,1	1/1:10,8:20:18.61:118,19,0	0/1:8,9:20:21.21:74,0,21	1/1:13,3:23:24.85:96,25,0	1/1:6,1:20:20.87:68,21,0	1/1:8,12:21:36.97:206,37,0	1/1:8,3:12:7.53:39,8,0	1/1:4,9:15:18.62:95,19,0	1/1:9,10:20:22.04:122,22,0	1/1:11,10:25:31.27:156,31,0	1/1:8,1:15:12.96:45,13,0	1/1:4,9:14:19.34:106,19,0	1/1:9,8:19:23.79:126,24,0	1/1:7,16:27:39.77:206,40,0	0/1:4,3:7:13.05:25,0,13	0/1:4,7:11:9.44:52,0,9	1/1:8,10:20:22.17:122,22,0	1/1:8,3:11:8.68:50,9,0	0/1:9,9:20:2.52:73,0,3	1/1:9,1:22:25.02:80,25,0	1/1:8,0:23:26.34:75,26,0	1/1:6,1:19:25.21:80,25,0
chr10	17302601	.	G	GT	3186.93	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-6.500;DP=598;FS=0.000;HRun=9;HaplotypeScore=58.1003;InbreedingCoeff=0.9817;MQ=69.66;MQ0=0;MQRankSum=0.929;QD=21.98;ReadPosRankSum=2.675;VQSLOD=4.4325;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,23:26:37.07:624,37,0	0/0:7,0:7:21:0,21,182	0/0:12,0:12:12.06:0,12,192	0/0:10,0:10:11.02:0,11,106	0/0:24,0:24:62.98:0,63,547	0/0:26,0:26:59.98:0,60,521	0/0:9,0:9:23.99:0,24,208	0/0:38,0:38:88.97:0,89,759	0/0:16,0:16:41.96:0,42,361	0/0:25,0:25:53.96:0,54,467	0/0:29,0:29:83.98:0,84,729	1/1:3,20:23:51.14:564,51,0	1/1:3,18:22:48.13:528,48,0	1/1:4,12:16:13.14:370,13,0	0/0:18,0:18:47.97:0,48,413	0/0:20,0:20:56.98:0,57,495	0/0:22,0:22:62.98:0,63,547	0/0:20,0:20:53.94:0,54,462	0/0:20,0:20:53.95:0,54,459	0/0:38,0:38:92.96:0,93,807	0/0:22,0:22:53.98:0,54,469	1/1:7,14:21:42.07:450,42,0	1/1:4,24:28:34.07:591,34,0	1/1:1,6:9:26.74:257,27,0	0/0:18,0:18:35.98:0,36,312	0/0:29,0:29:74.97:0,75,648	0/0:19,0:19:56.99:0,57,494	0/0:31,0:31:68.84:0,69,579
chr10	17302911	.	C	CTTTTCTTTC	1075.22	PASS	AB=0.800;AC=21;AF=0.955;AN=22;BaseQRankSum=-2.113;DP=32;FS=3.222;HRun=0;HaplotypeScore=24.1072;InbreedingCoeff=-0.2037;MQ=171.37;MQ0=0;MQRankSum=-0.971;QD=37.08;ReadPosRankSum=-1.542;VQSLOD=2.1872;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	./.	1/1:4,0:6:6.49:172,6,0	0/1:6,1:8:13.67:461,0,14	./.	./.	./.	1/1:1,0:1:3.01:52,3,0	./.	1/1:1,0:1:3.01:59,3,0	1/1:1,0:1:3:26,3,0	./.	./.	1/1:2,0:2:6.02:114,6,0	./.	./.	./.	1/1:2,0:2:2.99:24,3,0	1/1:1,0:1:3:27,3,0	./.	1/1:2,0:2:2.99:24,3,0	./.	./.	1/1:2,0:2:3.01:37,3,0	./.	./.	1/1:3,0:3:9:158,9,0	./.
chr10	17303684	.	ATAT	A	1620.68	PASS	AB=0.977;AC=30;AF=0.600;AN=50;BaseQRankSum=-0.240;DP=137;FS=14.332;HRun=0;HaplotypeScore=28.0515;InbreedingCoeff=0.5626;MQ=62.13;MQ0=2;MQRankSum=-0.014;QD=17.81;ReadPosRankSum=-0.159;VQSLOD=1.4545;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:18.53:0,19,283	1/1:0,0:1:3.01:37,3,0	0/0:6,0:3:8.82:0,9,103	0/0:8,0:4:7.98:0,8,40	1/1:0,4:6:8.99:91,9,0	1/1:0,0:4:9.03:107,9,0	./.	0/1:20,0:21:20.83:21,0,93	0/0:2,0:2:6.02:0,6,124	1/1:0,7:7:18:228,18,0	1/1:0,3:4:9.50:107,9,0	0/0:3,0:3:9.03:0,9,136	0/0:2,0:2:2.29:0,2,47	0/0:1,0:1:3.01:0,3,63	1/1:0,0:2:3.01:35,3,0	1/1:0,0:8:12.04:147,12,0	1/1:1,7:9:9.02:113,9,0	1/1:2,0:4:6.02:70,6,0	0/0:12,0:12:3.54:0,4,26	0/0:2,0:2:2.95:0,3,25	./.	./.	1/1:2,0:2:0.47:1,0,0	0/1:2,0:2:0:0,0,0	1/1:1,0:4:12.01:131,12,0	1/1:0,9:10:30.09:455,30,0	1/1:3,0:4:12:144,12,0	1/1:3,0:3:6.02:96,6,0
chr10	17303686	.	AT	A	600.38	PASS	AC=26;AF=0.542;AN=48;BaseQRankSum=4.855;DP=145;FS=9.152;HRun=1;HaplotypeScore=29.4983;InbreedingCoeff=0.7074;MQ=61.66;MQ0=2;MQRankSum=-0.172;QD=8.83;ReadPosRankSum=0.606;VQSLOD=0.2761;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:18.53:0,19,284	1/1:0,1:1:2.98:21,3,0	0/0:6,0:3:5.97:0,6,73	0/0:9,0:4:8.63:0,9,62	1/1:4,2:6:8.39:46,8,0	1/1:4,0:4:7.36:32,7,0	./.	0/0:23,0:23:11.64:0,12,267	0/0:2,0:2:6.02:0,6,96	1/1:7,0:7:15.33:105,15,0	1/1:3,1:4:8.54:51,9,0	0/0:3,0:3:9.03:0,9,139	0/0:3,0:3:5.99:0,6,73	0/0:1,0:1:3.01:0,3,48	1/1:2,0:2:2.22:7,2,0	1/1:8,0:8:11.18:60,11,0	1/1:8,1:9:8.89:65,9,0	1/1:6,0:6:9.37:48,9,0	0/0:12,0:12:31.24:0,31,160	0/0:4,0:4:9:0,9,87	./.	./.	0/0:2,0:2:2.80:0,3,13	./.	1/1:4,0:4:9.92:47,10,0	1/1:9,1:10:27.22:194,27,0	1/1:3,1:4:8.87:58,9,0	1/1:3,0:3:5.95:43,6,0
chr10	17306223	.	CT	C	332.93	PASS	AB=0.870;AC=7;AF=0.125;AN=56;BaseQRankSum=-2.945;DP=594;FS=14.648;HRun=15;HaplotypeScore=111.6051;InbreedingCoeff=0.5938;MQ=70.94;MQ0=2;MQRankSum=1.508;QD=4.01;ReadPosRankSum=2.098;VQSLOD=0.3073;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,3:37:10.99:0,11,477	0/0:9,0:11:23.66:0,24,123	0/0:38,0:19:10.56:0,11,79	0/0:25,0:16:8.62:0,9,76	0/0:12,0:29:41.87:0,42,241	0/0:18,0:21:45.77:0,46,274	0/0:7,0:24:30.23:0,30,149	1/1:13,15:30:4.92:228,5,0	0/0:13,1:15:5.11:0,5,164	0/0:16,0:17:28.78:0,29,189	0/0:14,0:17:37.54:0,38,208	0/0:13,1:14:7.60:0,8,167	0/0:8,0:14:5.84:0,6,41	0/0:12,0:12:27.13:0,27,224	0/0:21,0:26:43.41:0,43,263	0/0:20,0:23:37.26:0,37,176	0/0:8,0:23:32.35:0,32,154	0/0:4,0:9:4.09:0,4,17	0/1:17,2:20:28.59:88,0,29	1/1:8,7:16:12.94:81,13,0	1/1:10,3:17:5.67:63,6,0	0/0:15,0:16:28.32:0,28,221	0/0:16,2:18:19.68:0,20,280	0/0:22,0:23:38.16:0,38,353	0/0:24,0:27:45.05:0,45,222	0/0:24,0:28:32.69:0,33,170	0/0:30,0:34:66.95:0,67,397	0/0:4,0:7:14.35:0,14,80
chr10	17306296	.	C	CCAA	16659.88	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=-11.675;DP=491;FS=5.179;HRun=0;HaplotypeScore=71.3681;InbreedingCoeff=0.9259;MQ=78.97;MQ0=0;MQRankSum=-8.177;QD=62.16;ReadPosRankSum=3.004;VQSLOD=6.8542;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:87.28:0,87,1581	1/1:0,5:5:15.05:369,15,0	0/0:18,0:18:48.16:0,48,852	0/0:22,0:22:59.88:0,60,967	1/1:5,15:23:59.83:1095,60,0	1/1:1,20:21:60.16:1422,60,0	1/1:1,20:21:51.18:1256,51,0	0/0:27,0:27:78.16:0,78,1271	0/1:11,0:11:40.60:41,0,526	1/1:3,13:16:41.99:1012,42,0	1/1:1,15:17:45:943,45,0	0/0:12,0:12:33.11:0,33,614	0/0:10,0:10:27.09:0,27,503	0/0:13,0:13:39.13:0,39,726	1/1:0,19:20:57.20:1369,57,0	1/1:0,20:21:63.22:1541,63,0	1/1:1,22:23:66.18:1571,66,0	1/1:0,13:13:39.13:960,39,0	0/0:11,0:11:30.09:0,30,528	0/0:20,0:20:51.16:0,51,915	0/0:11,0:11:30.10:0,30,559	0/0:13,0:13:36.11:0,36,623	0/0:12,0:12:33.11:0,33,615	0/0:25,0:25:75.20:0,75,1308	1/1:0,12:14:36.12:886,36,0	1/1:2,21:23:69.17:1487,69,0	1/1:1,20:22:57.20:1399,57,0	1/1:0,17:18:54.19:1310,54,0
chr10	17306674	.	T	TC	476.50	PASS	AB=0.870;AC=8;AF=0.143;AN=56;BaseQRankSum=0.661;DP=420;FS=0.000;HRun=1;HaplotypeScore=63.4343;InbreedingCoeff=-0.1566;MQ=50.60;MQ0=34;MQRankSum=2.096;QD=3.97;ReadPosRankSum=2.053;VQSLOD=0.2309;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:26:64.43:0,64,586	0/0:6,0:6:6.38:0,6,29	0/0:23,0:9:23.54:0,24,183	0/0:17,0:8:14.76:0,15,121	0/0:21,0:20:41.81:0,42,181	0/0:10,0:9:25.73:0,26,222	0/1:9,0:9:47.53:48,0,67	0/1:19,5:24:72.29:212,0,72	0/0:9,0:8:19.17:0,19,143	0/0:15,0:15:34.88:0,35,153	0/0:12,0:11:22.42:0,22,106	0/0:14,0:14:41.81:0,42,388	0/0:19,0:18:49.96:0,50,437	0/0:11,0:10:23.76:0,24,251	0/0:16,0:16:16.43:0,16,153	0/1:13,1:14:25.20:25,0,157	0/0:22,0:17:16:0,16,53	0/1:10,0:8:22.56:23,0,32	0/1:17,2:16:68.65:118,0,69	0/1:12,9:20:34.02:124,0,34	0/1:9,2:6:9.09:50,0,9	0/0:2,0:2:5.22:0,5,33	0/0:13,0:13:30.51:0,31,323	0/0:3,0:1:2.92:0,3,17	0/1:8,4:12:10.33:10,0,105	0/0:19,0:17:41.43:0,41,188	0/0:19,0:16:21.63:0,22,109	0/0:17,0:14:15.33:0,15,59
chr10	17307266	.	T	TC	2826.86	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-11.956;DP=501;FS=4.776;HRun=7;HaplotypeScore=52.7360;InbreedingCoeff=0.9923;MQ=90.61;MQ0=0;MQRankSum=-2.316;QD=27.18;ReadPosRankSum=0.722;VQSLOD=4.3649;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:84.13:0,84,811	0/0:12,0:12:33.05:0,33,319	0/0:26,0:26:56.98:0,57,528	0/0:31,0:30:14.43:0,14,467	0/0:28,0:28:74.14:0,74,701	1/1:4,15:19:45.14:544,45,0	1/1:0,20:20:45.14:544,45,0	0/0:21,0:21:48.07:0,48,463	0/0:6,0:6:18:0,18,162	0/0:18,0:18:45.03:0,45,426	0/0:11,0:11:24:0,24,221	0/0:13,0:13:36.05:0,36,348	0/0:11,0:11:27.04:0,27,261	0/0:14,0:14:39.06:0,39,377	1/1:3,7:10:21.06:254,21,0	1/1:2,20:22:31.21:660,31,0	0/0:28,0:28:78.11:0,78,747	1/1:0,18:18:51.16:616,51,0	0/0:16,0:16:33.04:0,33,319	0/0:15,0:15:36.05:0,36,348	0/0:17,0:17:45.06:0,45,434	0/0:13,0:13:30.04:0,30,290	0/0:17,0:17:48.08:0,48,463	0/0:12,0:12:36.06:0,36,347	1/1:3,12:14:33.10:398,33,0	0/0:27,0:27:63.09:0,63,608	0/0:19,0:19:42.04:0,42,399	0/0:11,0:11:24.04:0,24,232
chr10	17308105	.	ATTGT	A	5028.63	PASS	AB=0.947;AC=17;AF=0.304;AN=56;BaseQRankSum=13.920;DP=584;FS=11.721;HRun=0;HaplotypeScore=98.5759;InbreedingCoeff=0.9310;MQ=66.16;MQ0=3;MQRankSum=0.809;QD=28.90;ReadPosRankSum=1.887;VQSLOD=4.2602;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:42:81.28:0,81,1929	1/1:2,6:8:12.04:192,12,0	0/0:22,0:17:21.07:0,21,424	0/0:24,0:19:12.04:0,12,272	1/1:3,19:23:48.08:693,48,0	0/0:19,0:19:33.11:0,33,776	0/0:18,0:18:27.09:0,27,648	0/0:35,0:35:39.13:0,39,882	0/0:15,0:15:36.12:0,36,859	1/1:6,15:21:45.14:693,45,0	1/1:3,17:20:45.15:709,45,0	0/0:15,0:15:33.11:0,33,789	0/0:16,0:16:33.11:0,33,769	0/0:13,0:13:30.10:0,30,690	0/0:30,0:30:63.19:0,63,1400	0/0:14,0:14:36.12:0,36,862	1/1:5,13:18:36.12:576,36,0	0/0:17,0:17:30.09:0,30,638	0/0:18,0:17:18.05:0,18,388	0/0:23,0:23:63.22:0,63,1446	0/0:21,0:21:39.10:0,39,839	0/0:15,0:14:33.11:0,33,792	0/0:15,0:15:36.11:0,36,783	0/0:37,0:37:69.24:0,69,1648	0/1:17,1:17:2.88:3,0,940	1/1:10,23:33:66.19:1028,66,0	1/1:6,11:17:30.10:480,30,0	1/1:2,14:16:42.14:654,42,0
chr10	17309841	.	TA	T	2650.83	PASS	AB=0.882;AC=13;AF=0.232;AN=56;BaseQRankSum=12.825;DP=608;FS=4.815;HRun=10;HaplotypeScore=59.5927;InbreedingCoeff=0.9138;MQ=75.17;MQ0=0;MQRankSum=-1.795;QD=18.80;ReadPosRankSum=0.936;VQSLOD=4.4703;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:66.12:0,66,707	0/1:13,2:15:5.25:5,0,326	0/0:17,0:17:27.40:0,27,300	0/0:9,0:9:11.83:0,12,112	0/0:29,0:29:81.16:0,81,868	1/1:2,22:24:56.98:495,57,0	1/1:0,14:14:41.99:365,42,0	0/0:38,1:39:73.21:0,73,1036	0/0:21,0:21:60.15:0,60,656	0/0:30,0:30:78.21:0,78,859	0/0:20,1:21:28.09:0,28,538	0/0:20,0:20:57.15:0,57,628	0/0:20,0:20:54.15:0,54,597	0/0:21,0:22:66.01:0,66,711	1/1:1,28:30:86.02:735,86,0	1/1:1,26:27:44.81:618,45,0	0/0:21,0:21:60.12:0,60,650	1/1:3,11:14:29.97:257,30,0	0/0:20,1:21:28.09:0,28,538	0/0:32,0:32:90.24:0,90,996	0/0:17,0:17:39.11:0,39,431	0/0:18,0:18:48.12:0,48,524	0/0:19,0:19:54.11:0,54,578	0/0:12,0:13:35.93:0,36,379	1/1:1,16:17:41.99:365,42,0	0/0:36,0:36:99:0,105,1148	0/0:32,0:31:90.21:0,90,976	0/0:7,0:7:18.02:0,18,187
chr10	17312024	.	CCATGGCCT	C	380.25	PASS	AB=0.867;AC=5;AF=0.089;AN=56;BaseQRankSum=3.259;DP=316;FS=1.460;HRun=0;HaplotypeScore=95.6031;InbreedingCoeff=-0.1131;MQ=86.30;MQ0=0;MQRankSum=-4.394;QD=9.05;ReadPosRankSum=-1.225;VQSLOD=2.0493;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:69.19:0,69,2884	0/0:1,0:1:3.01:0,3,132	0/0:9,0:9:21.07:0,21,913	0/0:16,0:16:45.15:0,45,1803	0/0:16,0:16:48.16:0,48,2105	0/1:9,1:10:57.91:58,0,284	0/0:7,0:7:11.52:0,12,140	0/0:33,0:33:93.28:0,93,3720	0/0:10,0:10:30.10:0,30,1283	0/0:9,0:9:27.09:0,27,1157	0/0:9,0:9:27.09:0,27,1138	0/0:12,0:12:36.12:0,36,1416	0/0:3,0:3:6.02:0,6,245	0/0:13,0:13:39.12:0,39,1606	0/1:10,0:10:22:22,0,369	0/1:2,1:3:38.18:77,0,38	0/0:15,0:15:33.11:0,33,1409	0/1:8,3:11:99:279,0,172	0/0:23,0:23:63.22:0,63,2633	0/0:13,0:13:39.12:0,39,1608	0/0:9,0:9:27.09:0,27,1060	0/0:6,0:6:18.06:0,18,789	0/0:4,0:4:12.03:0,12,421	0/0:11,0:11:33.11:0,33,1445	0/1:7,1:8:61.18:61,0,243	0/0:11,0:11:33.11:0,33,1394	0/0:14,0:14:42.14:0,42,1779	0/0:7,0:7:21.07:0,21,924
chr10	17312028	.	G	GTATACTT	4049.92	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=9.424;DP=310;FS=24.833;HRun=0;HaplotypeScore=76.1470;InbreedingCoeff=0.9100;MQ=85.53;MQ0=0;MQRankSum=-10.212;QD=92.04;ReadPosRankSum=0.329;VQSLOD=2.2225;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:69.19:0,69,1865	0/0:1,0:1:3.01:0,3,84	0/0:7,0:7:21.07:0,21,542	0/0:16,0:16:45.15:0,45,1200	0/0:17,0:17:51.16:0,51,1367	1/1:1,8:9:27.09:872,27,0	1/1:1,5:6:15.05:487,15,0	0/0:33,0:33:99:0,99,2558	0/0:11,0:11:33.11:0,33,883	0/0:10,0:10:30.09:0,30,782	0/0:10,0:10:30.09:0,30,780	0/0:12,0:12:36.12:0,36,935	0/0:2,0:2:6.02:0,6,131	0/0:13,0:13:39.12:0,39,1030	1/1:0,10:10:30.10:979,30,0	1/1:1,1:2:6.02:181,6,0	0/0:15,0:15:39.06:0,39,908	1/1:3,6:9:27.09:758,27,0	0/0:21,0:21:63.21:0,63,1685	0/0:13,0:13:39.12:0,39,1031	0/0:9,0:9:27.09:0,27,732	0/0:6,0:6:18.06:0,18,503	0/0:4,0:4:12.03:0,12,277	0/0:11,0:11:33.11:0,33,923	1/1:1,7:8:24.08:772,24,0	0/0:11,0:11:33.11:0,33,912	0/0:14,0:14:42.14:0,42,1147	0/0:7,0:7:21.07:0,21,587
chr10	17312029	.	GCC	G	744.27	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=10.522;DP=312;FS=21.967;HRun=2;HaplotypeScore=56.6183;InbreedingCoeff=0.9038;MQ=86.52;MQ0=0;MQRankSum=-10.104;QD=16.18;ReadPosRankSum=0.531;VQSLOD=-0.5312;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:66.23:0,66,1327	0/0:1,0:1:3.01:0,3,61	0/0:8,0:8:21.07:0,21,427	0/0:16,0:16:44.74:0,45,806	0/0:18,0:18:54.17:0,54,1055	1/1:2,8:10:26.66:189,27,0	1/1:1,5:6:14.88:104,15,0	0/0:33,0:33:99:0,99,1951	0/0:11,0:11:33.11:0,33,670	0/0:10,0:10:30.10:0,30,610	0/0:10,0:10:30.10:0,30,604	0/0:12,0:12:36.03:0,36,648	0/0:2,0:2:6.02:0,6,122	0/0:12,0:12:36.12:0,36,730	1/1:0,10:10:29.81:217,30,0	1/1:1,1:2:5.78:35,6,0	0/0:15,0:15:39.13:0,39,791	1/1:4,6:10:29.46:214,29,0	0/0:21,0:21:63.17:0,63,1225	0/0:12,0:12:36.12:0,36,731	0/0:9,0:9:27.08:0,27,500	0/0:6,0:6:18.06:0,18,361	0/0:3,0:3:9.03:0,9,183	0/0:11,0:11:33.11:0,33,670	1/1:1,7:8:23.68:165,24,0	0/0:11,0:11:33.11:0,33,663	0/0:15,0:15:42:0,42,837	0/0:7,0:7:21.07:0,21,427
chr10	17312097	.	GT	G	2267.04	PASS	AB=0.815;AC=39;AF=0.696;AN=56;BaseQRankSum=1.038;DP=291;FS=10.765;HRun=14;HaplotypeScore=42.0350;InbreedingCoeff=0.5563;MQ=65.39;MQ0=14;MQRankSum=-1.635;QD=8.72;ReadPosRankSum=1.214;VQSLOD=1.5938;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,12:15:35.62:242,36,0	1/1:1,2:3:2.97:21,3,0	0/1:15,1:11:5.27:5,0,79	0/1:5,1:2:6.40:6,0,19	0/1:5,6:11:13.06:64,0,13	1/1:1,0:13:24.44:71,24,0	1/1:1,0:6:8.14:24,8,0	1/1:11,27:35:49.16:471,49,0	0/0:9,0:9:23.85:0,24,206	1/1:3,8:10:26.71:183,27,0	1/1:2,2:5:8.43:50,8,0	0/0:4,0:5:8.80:0,9,59	0/0:4,0:4:6.01:0,6,56	0/0:4,0:4:6.01:0,6,56	1/1:4,0:10:12.66:39,13,0	1/1:0,1:9:19.27:68,19,0	1/1:3,20:23:19.78:280,20,0	1/1:1,0:14:28.52:82,29,0	1/1:6,11:14:23.65:161,24,0	1/1:2,9:11:20.79:141,21,0	1/1:0,1:1:2.98:21,3,0	0/0:3,0:3:0:0,0,0	0/0:2,0:1:3:0,3,28	0/0:4,0:4:3:0,3,28	1/1:5,0:17:25.51:79,26,0	1/1:4,10:12:29.73:204,30,0	1/1:1,8:9:14.83:103,15,0	1/1:2,6:6:17.84:123,18,0
chr10	17313256	.	AACTGC	A	16155.79	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=17.423;DP=577;FS=4.654;HRun=0;HaplotypeScore=127.6898;InbreedingCoeff=0.9890;MQ=80.16;MQ0=0;MQRankSum=-9.750;QD=64.37;ReadPosRankSum=6.033;VQSLOD=5.8918;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:63.22:0,63,2043	1/1:0,8:8:24.08:559,24,0	0/0:16,0:16:48.16:0,48,1505	0/0:18,0:18:48.59:0,49,1438	1/1:1,38:39:96.33:2192,96,0	1/1:1,13:14:42.14:975,42,0	1/1:0,7:7:21.07:488,21,0	0/0:33,0:33:99:0,99,3245	0/0:22,0:22:66.23:0,66,2120	1/1:0,29:29:87.28:1977,87,0	1/1:0,19:19:54.19:1258,54,0	0/0:18,0:18:51.18:0,51,1646	0/0:25,0:25:75.26:0,75,2453	0/0:20,0:20:60.21:0,60,1909	1/1:1,22:23:66.21:1437,66,0	1/1:1,12:13:39.13:907,39,0	1/1:1,11:12:36.10:791,36,0	1/1:0,6:6:15.05:349,15,0	0/0:19,0:19:54.19:0,54,1795	0/0:38,0:38:99:0,108,3583	0/0:18,0:18:54.19:0,54,1641	0/0:23,0:23:69.24:0,69,2248	0/0:32,0:32:96.33:0,96,3158	0/0:22,0:22:60.21:0,60,1928	1/1:0,21:21:54.19:1258,54,0	1/1:0,28:28:81.28:1870,81,0	1/1:0,28:28:81.28:1886,81,0	1/1:0,3:3:9.03:210,9,0
chr10	17313328	.	C	CCTT	18120.16	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-7.521;DP=622;FS=7.008;HRun=0;HaplotypeScore=102.6820;InbreedingCoeff=0.9941;MQ=78.19;MQ0=0;MQRankSum=-7.810;QD=56.27;ReadPosRankSum=3.385;VQSLOD=7.1929;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:60.15:0,60,938	1/1:2,13:15:42.14:864,42,0	0/0:18,0:18:48.06:0,48,721	0/0:14,0:14:11.60:0,12,402	1/1:3,35:38:96.32:1954,96,0	1/1:2,22:25:69.24:1500,69,0	1/1:0,13:14:30.10:650,30,0	0/0:37,0:37:99:0,102,1628	0/0:26,0:26:69.20:0,69,1069	1/1:6,18:24:66.17:1338,66,0	1/1:1,29:31:87.23:1861,87,0	0/0:20,0:20:51.15:0,51,799	0/0:22,0:22:63.22:0,63,1041	0/0:17,0:17:45.15:0,45,746	1/1:4,26:30:81.28:1722,81,0	1/1:4,17:21:51.17:1068,51,0	1/1:3,11:14:33.11:747,33,0	1/1:1,15:16:42.14:951,42,0	0/0:12,0:12:33.10:0,33,520	0/0:26,0:26:72.23:0,72,1151	0/0:24,0:24:69.20:0,69,1095	0/0:28,0:28:78.25:0,78,1243	0/0:20,0:20:45.14:0,45,725	0/0:15,0:15:45.15:0,45,734	1/1:1,22:23:63.22:1426,63,0	1/1:3,29:32:93.32:2015,93,0	1/1:12,20:32:84.06:1616,84,0	1/1:0,7:7:18.06:408,18,0
chr10	17313987	.	G	GT	9085	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-13.299;DP=672;FS=5.614;HRun=8;HaplotypeScore=68.2344;InbreedingCoeff=0.9802;MQ=82.70;MQ0=0;MQRankSum=-2.630;QD=27.12;ReadPosRankSum=3.932;VQSLOD=5.5796;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,1:30:46.39:0,46,669	1/1:1,6:7:18.05:208,18,0	0/0:32,0:32:44.04:0,44,495	0/0:23,0:20:35.70:0,36,366	1/1:0,27:28:72.17:816,72,0	1/1:3,13:16:30.09:346,30,0	1/1:3,15:18:42.12:485,42,0	0/0:31,0:31:81.47:0,81,702	0/0:18,0:18:45.02:0,45,412	1/1:7,23:31:75.19:844,75,0	1/1:1,24:25:72.21:829,72,0	0/0:28,0:28:81.03:0,81,736	0/0:22,0:22:60.02:0,60,547	0/0:24,0:24:66.02:0,66,603	1/1:4,19:24:35.57:645,36,0	1/1:3,11:14:5.64:319,6,0	1/1:1,37:38:99:1279,111,0	1/1:4,13:17:36.08:403,36,0	0/0:20,0:20:48.01:0,48,436	0/0:25,0:26:71.88:0,72,628	0/0:18,0:18:39:0,39,353	0/0:19,0:19:54.02:0,54,490	0/0:29,0:29:84.02:0,84,762	0/0:16,0:16:45.02:0,45,412	1/1:4,21:26:14.12:652,14,0	1/1:3,20:23:63.18:718,63,0	1/1:6,33:39:77.06:1050,77,0	1/1:12,17:29:20.69:492,21,0
chr10	17314979	.	T	TTAAA	17346.09	PASS	AB=0.536;AC=27;AF=0.482;AN=56;BaseQRankSum=-14.107;DP=563;FS=9.975;HRun=0;HaplotypeScore=89.5027;InbreedingCoeff=0.9284;MQ=78.58;MQ0=0;MQRankSum=-6.268;QD=67.23;ReadPosRankSum=3.225;VQSLOD=6.4406;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,102,1863	1/1:0,13:13:39.13:1007,39,0	0/0:15,0:15:45.12:0,45,734	0/0:21,0:21:44:0,44,695	1/1:0,17:17:45.15:1168,45,0	1/1:2,17:19:45.15:1206,45,0	1/1:1,15:16:48.16:1290,48,0	0/0:34,0:34:90.26:0,90,1584	0/0:19,0:19:54.19:0,54,1009	1/1:2,22:25:75.20:1914,75,0	1/1:1,18:20:42.06:956,42,0	0/0:19,0:19:57.17:0,57,1014	0/0:20,0:20:57.20:0,57,1082	0/0:16,0:16:48.15:0,48,878	1/1:2,21:23:51.18:1368,51,0	0/1:2,13:15:20.85:850,0,21	1/1:2,23:25:60.68:1619,61,0	1/1:0,13:13:33.11:850,33,0	0/0:11,0:11:30.08:0,30,536	0/0:25,0:25:72.23:0,72,1322	0/0:28,0:28:81.28:0,81,1521	0/0:22,0:22:66.20:0,66,1199	0/0:16,0:16:45.13:0,45,783	0/0:22,0:22:60.19:0,60,1105	1/1:1,14:15:42.14:1132,42,0	1/1:2,25:27:75.19:1883,75,0	1/1:0,22:23:60.21:1616,60,0	1/1:2,5:7:21.07:485,21,0
chr10	17317627	.	C	CTG	908.50	PASS	AB=1.000;AC=25;AF=0.543;AN=46;BaseQRankSum=-1.694;DP=689;FS=22.648;HRun=0;HaplotypeScore=110.0015;InbreedingCoeff=0.1829;MQ=72.86;MQ0=32;MQRankSum=0.190;QD=2.24;ReadPosRankSum=-0.498;VQSLOD=0.6923;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:35,0:34:16.39:110,0,16	0/1:4,0:4:13.98:14,0,18	./.	0/1:80,0:35:0:0,0,0	1/1:18,1:19:12.40:111,12,0	0/0:27,0:28:2.80:0,3,14	./.	./.	0/0:22,0:30:10.74:0,11,55	1/1:30,0:30:15.97:167,16,0	1/1:9,0:9:6:52,6,0	0/1:16,0:16:17.96:18,0,23	0/1:15,0:15:15.95:16,0,25	1/1:14,8:23:6.02:87,6,0	0/0:12,0:13:2.84:0,3,14	0/0:13,0:17:5.68:0,6,28	1/1:36,0:35:18.84:150,19,0	0/1:15,0:19:4.95:5,0,8	0/1:16,0:15:0:0,0,0	0/0:11,0:11:0:0,0,0	./.	0/1:12,0:11:16.42:17,0,16	./.	1/1:31,6:38:6.02:74,6,0	0/0:18,0:18:2.84:0,3,14	1/1:28,0:27:24.03:195,24,0	1/1:20,0:19:3:26,3,0	0/1:6,0:5:0:0,0,0
chr10	17318716	.	G	GA	3116.02	PASS	AB=0.941;AC=13;AF=0.232;AN=56;BaseQRankSum=-9.212;DP=616;FS=1.916;HRun=8;HaplotypeScore=66.8083;InbreedingCoeff=0.9218;MQ=70.90;MQ0=2;MQRankSum=0.287;QD=20.50;ReadPosRankSum=1.659;VQSLOD=3.7239;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,119,1076	0/0:16,0:16:39.01:0,39,357	0/0:30,1:20:16.57:0,17,328	0/0:16,1:14:30:0,30,267	0/0:23,0:23:57.03:0,57,521	1/1:3,19:22:51.15:589,51,0	1/1:2,17:19:42.12:485,42,0	0/0:33,1:34:34.36:0,34,561	0/0:17,0:17:39.02:0,39,357	0/0:22,0:22:54.03:0,54,494	0/0:26,0:26:44.62:0,45,579	0/1:15,1:16:4.62:5,0,217	0/0:19,0:19:57.01:0,57,516	0/0:18,0:18:48.02:0,48,438	1/1:5,29:34:53.73:856,54,0	1/1:5,17:22:42.12:485,42,0	0/0:21,0:21:60.03:0,60,549	1/1:7,10:17:34.65:382,35,0	0/0:22,1:23:62.22:0,62,547	0/0:23,0:23:63.03:0,63,576	0/0:17,0:18:44.05:0,44,390	0/0:10,0:10:27.01:0,27,247	0/0:21,0:21:51:0,51,460	0/0:15,0:15:30.01:0,30,275	1/1:6,16:22:45.09:504,45,0	0/0:22,0:22:60.03:0,60,549	0/0:30,1:31:52.36:0,52,718	0/0:14,0:14:39.01:0,39,357
chr10	17318786	.	GTTTTT	G	2802.07	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=6.379;DP=481;FS=10.551;HRun=17;HaplotypeScore=95.8864;InbreedingCoeff=0.9741;MQ=67.26;MQ0=0;MQRankSum=-5.192;QD=29.19;ReadPosRankSum=6.692;VQSLOD=1.6837;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:37:96.28:0,96,2050	0/0:9,0:9:18.06:0,18,389	0/0:14,0:9:14.26:0,14,200	0/0:13,0:8:7.78:0,8,111	0/0:14,0:16:36.12:0,36,789	1/1:8,13:22:50.31:619,50,0	1/1:3,6:9:17.99:267,18,0	0/0:29,0:33:60.18:0,60,1305	0/0:8,0:11:21.07:0,21,483	0/0:10,0:14:27.09:0,27,551	0/0:10,0:23:43.96:0,44,780	0/0:11,0:11:24.06:0,24,493	0/0:10,0:14:33.10:0,33,719	0/0:9,0:14:30.10:0,30,626	1/1:5,13:18:44.98:625,45,0	1/1:4,9:14:32.99:444,33,0	0/0:16,0:20:47.52:0,48,930	1/1:5,13:18:35.95:542,36,0	0/0:27,0:26:57.18:0,57,1292	0/0:12,0:16:42.14:0,42,934	0/0:12,0:12:27.09:0,27,621	0/0:5,0:7:21.07:0,21,461	0/0:6,0:10:26.88:0,27,645	0/0:8,0:8:21.05:0,21,458	1/1:4,10:15:34.37:492,34,0	0/0:14,0:33:87.30:0,87,1879	0/0:10,0:26:31.34:0,31,512	0/0:6,0:15:30.10:0,30,679
chr10	17319100	.	TCC	T	3206.70	PASS	AB=0.611;AC=19;AF=0.339;AN=56;BaseQRankSum=-5.360;DP=346;FS=0.000;HRun=11;HaplotypeScore=49.8194;InbreedingCoeff=0.7042;MQ=75.24;MQ0=1;MQRankSum=-0.398;QD=19.32;ReadPosRankSum=4.269;VQSLOD=2.0186;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:14:7.49:0,7,26	1/1:1,4:5:12.03:128,12,0	0/0:13,0:12:20.85:0,21,299	0/0:7,0:7:18.02:0,18,200	1/1:5,26:31:63.09:670,63,0	0/1:4,1:12:13.42:13,0,49	0/0:1,0:8:9.98:0,10,34	0/0:20,0:21:17.55:0,18,238	0/1:1,3:8:34.79:74,0,35	1/1:4,14:18:42.08:439,42,0	1/1:1,22:23:60.15:638,60,0	0/0:2,0:5:10.48:0,10,51	0/0:3,0:7:7.49:0,7,26	0/0:8,0:13:21.94:0,22,129	0/0:7,0:11:18.33:0,18,82	0/0:5,0:10:17.97:0,18,77	1/1:4,11:15:33.07:351,33,0	0/0:2,0:10:17.47:0,17,60	0/0:6,0:8:14.53:0,15,176	0/0:15,0:15:14.92:0,15,207	0/0:5,0:5:12.02:0,12,147	0/0:2,0:8:18.35:0,18,93	0/1:8,0:14:12.50:13,0,83	0/0:3,0:8:9.98:0,10,34	0/0:3,0:17:27.95:0,28,111	1/1:2,16:18:48.11:511,48,0	1/1:2,12:14:33.06:351,33,0	1/1:1,7:8:21.05:223,21,0
chr10	17320089	.	T	TTA	1387.03	PASS	AB=1.000;AC=14;AF=0.250;AN=56;BaseQRankSum=2.499;DP=372;FS=3.281;HRun=0;HaplotypeScore=67.4912;InbreedingCoeff=0.6824;MQ=65.02;MQ0=13;MQRankSum=5.794;QD=12.96;ReadPosRankSum=0.323;VQSLOD=3.3538;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:35.86:0,36,505	1/1:7,0:8:10.48:97,10,0	0/0:36,0:11:4.71:0,5,110	0/0:32,0:10:13.62:0,14,170	1/1:17,0:17:11.65:154,12,0	0/0:22,0:22:42.14:0,42,567	0/0:10,0:9:9.03:0,9,126	0/0:35,0:34:90.05:0,90,1216	0/0:3,0:3:9.03:0,9,132	1/1:8,0:8:14.06:126,14,0	0/1:10,0:11:15.38:120,0,15	0/0:7,0:7:21.04:0,21,262	0/0:7,0:7:14.72:0,15,194	0/0:6,0:6:18.04:0,18,252	0/0:14,0:14:21.06:0,21,268	0/0:14,0:14:33.11:0,33,451	1/1:18,0:19:39.33:355,39,0	0/0:14,0:14:9.03:0,9,132	0/0:15,0:13:29.94:0,30,369	0/0:6,0:6:9.03:0,9,137	0/0:4,0:4:6.02:0,6,82	0/0:2,0:2:6.02:0,6,92	0/0:5,0:5:9.03:0,9,132	0/0:5,0:5:15.05:0,15,229	0/0:15,0:15:30.10:0,30,421	1/1:4,10:14:34.86:402,35,0	1/1:17,0:17:12.32:149,12,0	0/1:13,0:12:13.37:166,0,13
chr10	17320090	.	T	TA	1708.36	PASS	AB=0.877;AC=16;AF=0.286;AN=56;BaseQRankSum=2.885;DP=370;FS=1.067;HRun=0;HaplotypeScore=62.3863;InbreedingCoeff=0.6596;MQ=65.07;MQ0=13;MQRankSum=5.649;QD=9.60;ReadPosRankSum=1.026;VQSLOD=3.5286;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:13:21.46:0,21,439	1/1:2,7:9:13.03:140,13,0	0/1:36,0:11:0.58:1,0,78	0/1:32,0:10:1.25:1,0,146	1/1:4,13:17:18.42:199,18,0	0/0:22,0:22:42.12:0,42,483	0/0:10,0:9:9.03:0,9,117	0/0:34,0:33:90.21:0,90,1127	0/0:3,0:3:9.03:0,9,123	1/1:2,6:9:14.44:154,14,0	0/1:7,3:11:10.44:132,0,10	0/0:7,0:7:21.04:0,21,254	0/0:6,0:6:14.54:0,15,177	0/0:6,0:6:18.05:0,18,229	0/0:13,0:13:21.05:0,21,232	0/0:14,0:14:33.10:0,33,386	1/1:9,10:19:53.43:543,53,0	0/0:13,0:13:9.03:0,9,118	0/0:14,0:12:29.85:0,30,340	0/0:6,0:6:9.03:0,9,124	0/0:4,0:4:6.01:0,6,69	0/0:2,0:2:6.02:0,6,84	0/0:5,0:5:9.03:0,9,123	0/0:5,0:5:15.05:0,15,209	0/0:15,0:15:30.09:0,30,367	1/1:14,0:15:18.22:241,18,0	1/1:2,15:17:16.75:227,17,0	0/1:8,5:12:4.34:253,0,4
chr10	17320092	.	ATTTTTTTTT	A	2613.52	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=0.095;DP=367;FS=0.000;HRun=13;HaplotypeScore=97.4547;InbreedingCoeff=0.8128;MQ=62.48;MQ0=12;MQRankSum=-7.868;QD=29.70;ReadPosRankSum=6.464;VQSLOD=0.0400;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:39.12:0,39,1300	0/0:9,0:9:12.04:0,12,264	0/0:33,0:9:17.47:0,17,228	0/0:33,0:10:13.09:0,13,182	0/0:15,0:15:36.07:0,36,884	1/1:3,19:22:36.10:982,36,0	1/1:2,8:9:2.99:82,3,0	0/0:16,0:32:73.09:0,73,2248	0/0:2,0:2:6.02:0,6,289	0/0:9,0:9:24.06:0,24,742	0/0:11,0:11:30.06:0,30,789	0/0:6,0:6:15.05:0,15,489	0/0:4,0:6:15.05:0,15,473	0/0:6,0:6:18.06:0,18,767	1/1:1,11:12:15.04:409,15,0	1/1:2,13:15:27.07:736,27,0	0/0:18,0:19:52.40:0,52,1484	1/1:2,12:14:2.99:82,3,0	0/0:6,0:12:30.09:0,30,811	0/0:3,0:9:18.06:0,18,463	0/0:0,0:4:6.02:0,6,260	0/0:2,0:2:6.02:0,6,212	0/0:4,0:5:6.02:0,6,212	0/0:5,0:5:12.04:0,12,501	1/1:4,11:15:18.02:491,18,0	0/0:14,0:15:45.15:0,45,1215	0/0:17,0:17:21.06:0,21,586	0/0:13,0:12:36.12:0,36,1383
chr10	17321277	.	TG	T	10434.08	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=14.876;DP=735;FS=9.822;HRun=4;HaplotypeScore=71.6589;InbreedingCoeff=0.9997;MQ=89.61;MQ0=0;MQRankSum=-3.468;QD=32.40;ReadPosRankSum=2.672;VQSLOD=5.2154;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,31:36:99:1158,99,0	0/0:14,0:14:42.14:0,42,588	0/0:25,0:24:66.22:0,66,907	0/0:31,0:31:86.98:0,87,1103	0/0:27,0:27:78.25:0,78,1075	0/0:29,0:29:84.25:0,84,1140	0/0:21,0:21:54.18:0,54,756	1/1:3,26:29:74.99:888,75,0	1/1:1,32:33:93.29:1116,93,0	0/0:35,0:35:99:0,102,1414	0/0:29,0:29:87.28:0,87,1198	1/1:0,27:27:75.23:900,75,0	1/1:0,27:27:75.23:900,75,0	1/1:1,16:17:42.13:504,42,0	0/0:36,0:36:99:0,105,1454	0/0:21,0:21:60.20:0,60,840	0/0:29,0:29:87.29:0,87,1215	0/0:15,0:15:42.13:0,42,574	1/1:1,13:14:39.12:468,39,0	1/1:0,30:30:84.26:1008,84,0	1/1:0,37:37:96.29:1152,96,0	1/1:0,26:26:69.21:828,69,0	1/1:1,24:25:68.96:828,69,0	1/1:1,20:21:57.17:684,57,0	0/0:19,0:19:57.19:0,57,798	0/0:30,0:30:90.30:0,90,1260	0/0:44,0:44:99:0,132,1847	0/0:8,0:8:24.08:0,24,336
chr10	17322683	.	C	CGATA	1478.33	PASS	AC=10;AF=0.294;AN=34;BaseQRankSum=-5.054;DP=495;FS=0.000;HRun=0;HaplotypeScore=131.2747;InbreedingCoeff=0.6764;MQ=57.74;MQ0=14;MQRankSum=-1.481;QD=16.80;ReadPosRankSum=-0.891;VQSLOD=2.9514;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:31:21.02:0,21,195	0/0:12,0:12:0:0,0,0	./.	./.	0/0:19,0:19:0.47:0,0,1	./.	./.	./.	0/0:19,0:19:18.04:0,18,250	./.	./.	0/0:10,0:20:24.03:0,24,223	0/0:12,0:13:3:0,3,28	0/0:24,0:24:30.10:0,30,444	./.	./.	1/1:12,0:12:2.97:20,3,0	./.	1/1:16,1:22:18:245,18,0	1/1:7,14:20:27.09:623,27,0	1/1:15,13:28:33.07:713,33,0	0/0:13,0:17:9:0,9,79	0/0:14,0:14:15.05:0,15,225	0/0:19,0:19:24.08:0,24,357	./.	0/0:15,0:13:2.43:0,2,19	0/0:24,0:23:2.69:0,3,7	1/1:4,0:4:0.40:1,0,0
chr10	17324135	.	AT	A	2366.81	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=12.620;DP=527;FS=7.107;HRun=8;HaplotypeScore=60.9026;InbreedingCoeff=0.9845;MQ=63.67;MQ0=1;MQRankSum=-0.125;QD=21.52;ReadPosRankSum=1.292;VQSLOD=4.0432;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:81.19:0,81,935	0/0:10,0:11:32.94:0,33,362	0/0:8,0:6:15.05:0,15,181	0/0:11,0:10:17.71:0,18,177	0/0:33,0:33:93.29:0,93,1123	1/1:0,31:31:87.14:840,87,0	1/1:2,11:13:27.04:261,27,0	0/0:16,0:14:37:0,37,437	0/0:16,0:16:48.13:0,48,560	0/0:35,0:35:96.28:0,96,1150	0/0:18,0:18:48.15:0,48,580	0/0:8,0:8:24.07:0,24,290	0/0:15,0:15:39.12:0,39,471	0/0:9,0:9:27.08:0,27,326	1/1:5,13:17:31.86:295,32,0	1/1:0,13:13:30.05:290,30,0	0/0:33,0:33:65.97:0,66,942	1/1:2,8:10:21.03:203,21,0	0/0:8,0:7:21.05:0,21,244	0/0:24,0:24:69.20:0,69,819	0/0:10,0:10:21.06:0,21,254	0/0:23,0:23:63.19:0,63,761	0/0:23,0:23:60.18:0,60,725	0/0:9,0:9:21.06:0,21,254	1/1:0,25:25:69.11:666,69,0	0/0:36,0:36:99:0,99,1178	0/0:38,0:38:99:0,105,1275	0/0:4,0:4:12.04:0,12,144
chr10	17327529	.	T	TA	6108.85	PASS	AB=0.789;AC=24;AF=0.429;AN=56;BaseQRankSum=2.173;DP=497;FS=0.375;HRun=9;HaplotypeScore=105.3883;InbreedingCoeff=0.8599;MQ=72.99;MQ0=0;MQRankSum=-2.582;QD=23.59;ReadPosRankSum=2.365;VQSLOD=4.6969;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:41.97:0,42,362	1/1:2,8:10:24.06:266,24,0	0/0:21,0:20:18.18:0,18,158	0/1:12,0:12:3.75:4,0,104	1/1:5,37:42:99:1184,111,0	0/0:15,0:15:38.95:0,39,332	0/0:7,0:7:14.99:0,15,130	0/0:34,0:34:83.95:0,84,723	0/0:25,0:25:62.98:0,63,547	1/1:3,19:22:51.14:564,51,0	1/1:7,24:31:69.19:763,69,0	0/0:11,0:11:32.99:0,33,286	0/0:19,0:19:47.98:0,48,417	0/0:8,0:8:20.99:0,21,182	1/1:3,15:18:39.11:431,39,0	1/1:2,12:14:33.09:365,33,0	0/1:6,16:22:27.01:414,0,27	1/1:1,13:14:34.17:349,34,0	0/0:29,0:29:68.98:0,69,599	0/0:20,0:20:53.94:0,54,461	0/0:8,0:8:11.98:0,12,104	0/0:9,0:9:20.99:0,21,182	0/0:6,0:6:12:0,12,104	0/0:9,0:9:17.95:0,18,147	1/1:2,18:20:48.13:531,48,0	1/1:5,17:22:28.09:538,28,0	1/1:5,17:22:22.07:469,22,0	1/1:3,7:10:21.06:232,21,0
chr10	17329218	.	T	TGGGGGG	2129.08	PASS	AB=0.934;AC=11;AF=0.204;AN=54;BaseQRankSum=-0.910;DP=394;FS=47.986;HRun=0;HaplotypeScore=112.6397;InbreedingCoeff=-0.0370;MQ=53.74;MQ0=17;MQRankSum=-3.316;QD=14.39;ReadPosRankSum=5.613;VQSLOD=0.4926;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:31:85.05:0,85,1880	0/0:6,0:6:13.86:0,14,249	0/0:39,0:3:6.02:0,6,80	0/1:26,0:12:4.06:4,0,307	0/1:17,0:17:0.69:1,0,474	0/1:10,0:10:99:162,0,121	0/1:11,0:10:76.79:392,0,77	0/0:20,0:20:51.08:0,51,1013	0/0:9,0:8:24.06:0,24,463	0/0:19,0:17:22.98:0,23,454	0/0:17,0:15:2.25:0,2,381	0/0:8,0:7:18.06:0,18,404	0/0:10,0:10:27.09:0,27,619	0/0:11,0:11:32.70:0,33,676	0/1:14,1:15:82.37:467,0,82	1/1:5,2:7:14.59:246,15,0	0/1:22,0:19:24.17:24,0,383	0/1:9,5:13:99:672,0,100	0/0:16,0:14:42.14:0,42,958	0/0:13,0:13:30.10:0,30,686	0/0:5,0:5:13.29:0,13,255	0/0:8,0:8:24.08:0,24,493	0/0:9,0:9:26.65:0,27,479	0/0:11,0:10:8.20:0,8,137	0/1:10,3:12:99:278,0,157	0/1:12,0:12:23.71:24,0,236	0/0:12,0:12:24.45:0,24,440	./.
chr10	17329231	.	G	GGGT	1951.10	PASS	AB=0.753;AC=25;AF=0.463;AN=54;BaseQRankSum=-0.376;DP=342;FS=18.539;HRun=0;HaplotypeScore=70.6948;InbreedingCoeff=0.3717;MQ=46.64;MQ0=10;MQRankSum=-1.249;QD=10.43;ReadPosRankSum=2.563;VQSLOD=1.7354;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:29:19.59:0,20,451	1/1:0,0:7:7.53:29,8,0	0/0:19,0:1:3.01:0,3,42	0/0:13,0:5:12.49:0,12,134	0/1:2,0:17:5.15:5,0,56	1/1:0,13:13:24.08:491,24,0	1/1:3,12:12:21.03:407,21,0	0/0:13,0:13:9.91:0,10,193	0/1:8,0:7:4.01:4,0,129	0/1:3,0:14:22.42:33,0,22	1/1:2,0:15:7.21:33,7,0	0/0:7,0:6:11.65:0,12,76	0/0:13,0:13:8.41:0,8,217	0/0:15,0:15:36.81:0,37,290	1/1:1,13:15:1.42:250,1,0	1/1:2,5:7:9.03:183,9,0	0/1:7,0:16:9.99:10,0,98	1/1:0,3:3:6.02:144,6,0	0/0:16,0:15:18.78:0,19,272	0/0:11,0:11:18.86:0,19,130	0/1:7,0:7:9.99:10,0,83	0/0:9,0:9:20.13:0,20,152	0/1:6,0:6:7.12:7,0,88	0/0:6,0:6:6.63:0,7,33	1/1:3,13:15:21.07:460,21,0	0/1:3,0:15:32.15:32,0,43	1/1:0,0:9:4.27:34,4,0	./.
chr10	17330988	.	CCTCTCT	C	2017.64	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=3.195;DP=683;FS=3.874;HRun=0;HaplotypeScore=159.5282;InbreedingCoeff=0.8570;MQ=66.61;MQ0=10;MQRankSum=-7.644;QD=14.84;ReadPosRankSum=2.002;VQSLOD=3.2573;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:29:66.10:0,66,1776	0/0:6,0:6:15.05:0,15,384	0/0:38,0:21:8.54:0,9,224	0/0:45,0:21:12.98:0,13,220	0/0:31,0:31:39.52:0,40,1532	1/1:5,13:18:24.08:508,24,0	1/1:14,10:25:8.92:168,9,0	0/0:47,0:47:75.06:0,75,1616	0/0:19,0:23:44.74:0,45,1166	0/0:24,0:24:57.15:0,57,1299	0/0:31,0:31:59.88:0,60,1219	0/0:21,0:22:54.17:0,54,1381	0/0:19,0:22:45.15:0,45,1354	0/0:14,0:17:32.70:0,33,853	1/1:12,20:32:35.65:663,36,0	1/1:3,21:25:23.65:477,24,0	0/0:23,0:23:59.82:0,60,1278	1/1:6,8:14:6.02:127,6,0	0/0:11,0:10:16.58:0,17,303	0/0:9,0:20:14.76:0,15,190	0/0:8,0:14:2.76:0,3,71	0/0:16,0:18:37.24:0,37,1102	0/0:30,0:29:67.66:0,68,1788	0/0:25,0:26:66.22:0,66,1838	1/1:4,16:21:14.98:250,15,0	0/0:26,0:26:59.96:0,60,1353	0/0:25,0:25:0.89:0,1,1247	0/0:15,0:14:33.03:0,33,752
chr10	17336033	.	GC	G	1501.59	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=3.139;DP=395;FS=10.940;HRun=11;HaplotypeScore=46.5767;InbreedingCoeff=0.7499;MQ=80.89;MQ0=0;MQRankSum=-1.391;QD=13.06;ReadPosRankSum=4.598;VQSLOD=2.2387;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:33.49:0,33,320	1/1:1,3:4:8.99:74,9,0	0/0:11,0:11:15.49:0,15,118	0/0:14,0:14:3.05:0,3,85	1/1:3,12:15:38.95:320,39,0	0/0:13,0:22:11.84:0,12,95	0/0:18,0:22:35.92:0,36,305	0/0:26,0:26:3.56:0,4,26	0/0:14,1:15:14.39:0,14,322	1/1:7,7:16:22.02:159,22,0	1/1:6,9:15:11.64:117,12,0	0/0:21,0:21:48.04:0,48,456	0/0:11,0:10:15.04:0,15,160	0/0:10,1:11:2.39:0,2,199	0/0:2,0:9:14.19:0,14,88	0/0:6,0:6:10.25:0,10,63	1/1:2,22:24:57.40:468,57,0	0/0:4,0:10:17.52:0,18,129	0/0:1,0:6:9.32:0,9,61	0/0:2,0:6:2.84:0,3,15	0/0:10,0:17:3.48:0,3,33	0/0:12,0:12:0.09:0,0,122	0/0:8,0:8:18.02:0,18,176	0/0:18,0:18:45.01:0,45,437	0/0:8,0:8:0.89:0,1,2	1/1:5,8:14:26:203,26,0	1/1:6,12:18:32.94:270,33,0	1/1:2,6:9:11.02:80,11,0
chr10	17337853	.	T	TAA	1752.59	PASS	AB=1.000;AC=10;AF=0.179;AN=56;BaseQRankSum=0.448;DP=555;FS=1.002;HRun=12;HaplotypeScore=81.1041;InbreedingCoeff=0.7429;MQ=73.80;MQ0=1;MQRankSum=-0.622;QD=13.91;ReadPosRankSum=-3.063;VQSLOD=1.9697;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:17:47.08:0,47,422	0/0:12,0:12:33.03:0,33,305	0/1:33,0:20:1.08:1,0,111	0/0:23,0:16:6.33:0,6,95	0/0:22,0:25:45.67:0,46,463	0/0:18,0:18:38.66:0,39,360	0/0:11,0:11:23.97:0,24,221	1/1:8,19:30:45.12:548,45,0	0/0:21,0:23:34.89:0,35,398	0/0:26,0:27:68.41:0,68,597	0/0:24,0:24:29.09:0,29,432	0/0:18,0:18:47.79:0,48,429	0/0:16,0:18:43.18:0,43,399	0/0:18,0:18:51.04:0,51,469	0/0:15,0:17:27.97:0,28,328	0/0:18,0:18:47.99:0,48,439	0/0:23,0:23:53.98:0,54,486	0/0:16,0:17:32.58:0,33,265	1/1:5,15:23:51.37:640,51,0	1/1:5,17:24:54.08:671,54,0	1/1:1,1:2:3.01:42,3,0	0/0:13,0:13:35.99:0,36,319	0/0:22,0:23:59.16:0,59,520	0/0:10,0:11:4.38:0,4,184	0/0:19,0:19:48.03:0,48,444	0/0:32,1:35:19.59:0,20,581	0/0:14,0:17:17.54:0,18,238	0/1:14,0:13:1.96:2,0,128
chr10	17338436	.	T	TGATC	8732.47	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-9.936;DP=735;DS;FS=0.406;HRun=0;HaplotypeScore=142.1658;InbreedingCoeff=0.9370;MQ=76.73;MQ0=53;MQRankSum=-1.104;QD=32.34;ReadPosRankSum=-0.220;VQSLOD=4.8800;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:21.07:0,21,318	1/1:4,0:4:10.59:140,11,0	0/0:107,0:31:29.92:0,30,645	0/0:249,0:89:17.62:0,18,1289	1/1:11,2:13:20.93:369,21,0	1/1:21,2:23:35.02:863,35,0	1/1:14,0:14:12.04:309,12,0	1/1:40,0:39:91.85:1313,92,0	0/0:7,0:7:21.05:0,21,308	1/1:14,0:14:40.95:742,41,0	1/1:14,0:14:33.11:596,33,0	0/0:14,0:14:30.10:0,30,472	0/0:15,0:14:39.09:0,39,582	0/0:18,0:16:33.11:0,33,510	1/1:12,0:12:27.09:467,27,0	1/1:15,0:15:33.58:669,34,0	1/1:17,0:17:34.43:469,34,0	1/1:7,0:6:18.06:248,18,0	1/1:21,0:19:42.12:609,42,0	1/1:14,0:13:3.01:30,3,0	1/1:14,0:14:9.03:155,9,0	0/0:13,0:13:29.60:0,30,441	0/0:17,0:17:32.12:0,32,488	0/0:10,0:9:12.03:0,12,190	1/1:9,0:8:9.03:136,9,0	1/1:11,0:11:27.09:455,27,0	1/1:15,1:16:36.59:668,37,0	1/1:10,0:10:30.10:496,30,0
chr10	17338438	.	A	ATCGATCTC	7994.10	PASS	AB=1.000;AC=34;AF=0.607;AN=56;BaseQRankSum=-8.493;DP=775;DS;FS=3.547;HRun=0;HaplotypeScore=192.5963;InbreedingCoeff=0.7884;MQ=73.56;MQ0=58;MQRankSum=-0.846;QD=25.79;ReadPosRankSum=-1.261;VQSLOD=4.1603;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:21.07:0,21,395	0/1:4,0:4:15.82:123,0,16	0/0:106,0:30:30.19:0,30,638	0/0:248,0:88:9.39:0,9,1258	1/1:16,0:15:20.90:326,21,0	1/1:30,0:30:53.12:880,53,0	1/1:21,0:20:12.45:334,12,0	1/1:47,0:44:99:1432,101,0	0/0:11,0:11:21.07:0,21,358	1/1:16,0:15:14.04:508,14,0	1/1:16,0:15:29.46:443,29,0	0/0:13,0:13:30.10:0,30,546	0/0:14,0:13:39.12:0,39,698	0/0:17,0:15:33.11:0,33,668	1/1:14,0:14:27.09:467,27,0	1/1:14,0:14:33.29:630,33,0	0/1:18,0:18:46.73:383,0,47	1/1:7,0:6:18.06:248,18,0	1/1:24,0:21:43.57:669,44,0	1/1:8,9:18:3.01:30,3,0	1/1:14,0:14:9.03:151,9,0	0/0:13,0:13:29.70:0,30,499	0/0:19,0:19:32.31:0,32,589	0/0:9,0:8:12.03:0,12,229	1/1:9,0:8:9.03:136,9,0	1/1:12,0:12:21.36:334,21,0	1/1:16,0:15:20.78:448,21,0	1/1:11,0:11:30.10:453,30,0
chr10	17338440	.	C	CGA	7900.12	PASS	AB=0.777;AC=34;AF=0.607;AN=56;BaseQRankSum=-8.295;DP=795;DS;FS=1.256;HRun=0;HaplotypeScore=152.1039;InbreedingCoeff=0.7797;MQ=71.37;MQ0=60;MQRankSum=0.014;QD=24.61;ReadPosRankSum=1.332;VQSLOD=5.2667;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:21.06:0,21,272	1/1:4,0:4:12.03:163,12,0	0/0:104,0:28:29.29:0,29,625	0/0:248,0:88:26.41:0,26,1305	1/1:15,1:15:20.97:344,21,0	1/1:32,1:31:39.17:752,39,0	1/1:9,13:21:12.51:210,13,0	1/1:19,30:45:24.09:1193,24,0	0/0:15,0:15:4.43:0,4,298	1/1:17,0:16:1.27:613,1,0	1/1:17,0:15:32.98:563,33,0	0/0:13,0:13:30.09:0,30,402	0/0:16,0:15:28.24:0,28,495	0/0:18,0:16:17.28:0,17,420	1/1:14,0:13:26.76:417,27,0	1/1:13,1:14:34.06:545,34,0	1/1:18,0:18:41.90:572,42,0	1/1:7,0:6:18.06:248,18,0	0/1:9,13:20:9.89:525,0,10	1/1:20,0:18:3.01:30,3,0	1/1:4,10:16:9.03:134,9,0	0/0:16,0:16:21.20:0,21,387	0/0:19,0:19:32.93:0,33,438	0/0:10,0:9:12.03:0,12,156	1/1:10,0:8:9.03:136,9,0	0/1:13,1:14:0.95:402,0,1	1/1:13,3:15:27.34:569,27,0	1/1:11,0:11:32.32:484,32,0
chr10	17338506	.	T	TG	515.37	PASS	AB=0.548;AC=12;AF=0.222;AN=54;BaseQRankSum=1.348;DP=379;FS=11.300;HRun=9;HaplotypeScore=72.5088;InbreedingCoeff=0.5823;MQ=55.73;MQ0=27;MQRankSum=-1.009;QD=7.16;ReadPosRankSum=-3.023;VQSLOD=0.0655;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:26.82:0,27,213	1/1:2,3:5:6.01:64,6,0	0/0:52,0:14:35.71:0,36,296	0/0:39,1:12:13.13:0,13,173	1/1:4,7:12:14.93:142,15,0	0/0:4,0:16:26.40:0,26,102	0/0:1,0:11:16.33:0,16,68	0/0:19,0:18:47.93:0,48,407	0/0:15,0:12:11.04:0,11,120	1/1:2,7:9:15.03:157,15,0	1/1:4,5:8:5.70:48,6,0	0/0:9,0:9:17.82:0,18,138	0/0:12,0:10:20.92:0,21,170	0/0:11,0:10:3.15:0,3,55	0/0:1,0:7:12.71:0,13,58	0/0:1,0:7:6.91:0,7,26	0/1:2,9:11:12.26:42,0,12	0/0:1,0:4:4.07:0,4,12	0/0:18,0:15:35.77:0,36,285	0/0:12,0:12:29.66:0,30,220	0/0:18,0:15:40.95:0,41,317	0/0:7,0:6:2.07:0,2,46	0/0:13,0:13:29.54:0,30,219	0/0:11,0:10:11.40:0,11,91	0/0:2,0:5:9.41:0,9,45	1/1:8,6:12:3.84:211,4,0	0/1:2,10:12:7.21:7,0,17	./.
chr10	17339487	.	G	GATAT	399.12	PASS	AB=1.000;AC=17;AF=0.773;AN=22;BaseQRankSum=-0.718;DP=135;FS=2.522;HRun=0;HaplotypeScore=26.5881;InbreedingCoeff=0.2045;MQ=86.00;MQ0=2;MQRankSum=-2.024;QD=6.44;ReadPosRankSum=0.979;VQSLOD=1.3134;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:11,0:11:35.90:36,0,46	1/1:3,0:3:0.89:2,1,0	./.	0/0:15,0:8:4.82:0,5,37	./.	./.	./.	1/1:5,0:5:6.02:95,6,0	./.	./.	./.	0/1:4,0:4:0:0,0,0	0/1:4,0:4:0:0,0,0	./.	1/1:4,0:6:5.75:65,6,0	1/1:1,0:2:3.01:52,3,0	1/1:9,0:9:3.01:46,3,0	1/1:6,4:10:6.02:144,6,0	./.	./.	./.	./.	./.	./.	1/1:8,0:8:3.01:45,3,0	./.	./.	./.
chr10	17340362	.	GTCCGCT	G	7971.26	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=14.668;DP=616;FS=13.493;HRun=0;HaplotypeScore=130.1824;InbreedingCoeff=0.9870;MQ=85.83;MQ0=0;MQRankSum=-16.010;QD=60.85;ReadPosRankSum=1.514;VQSLOD=4.5005;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,129,4451	0/0:12,0:12:36.12:0,36,1284	0/0:18,0:18:28.22:0,28,1424	0/0:27,0:27:78.27:0,78,2608	0/0:21,0:21:63.22:0,63,2179	1/1:1,26:27:72.25:1700,72,0	1/1:2,19:21:51.17:1168,51,0	0/0:29,0:29:87.30:0,87,2988	0/0:24,0:24:72.25:0,72,2561	0/0:32,0:32:93.32:0,93,3253	0/0:15,0:15:45.14:0,45,1518	0/0:17,0:17:51.18:0,51,1806	0/0:16,0:16:48.16:0,48,1657	0/0:19,0:19:57.20:0,57,1933	1/1:1,30:31:81.28:1914,81,0	1/1:0,25:25:72.25:1701,72,0	0/0:25,0:25:72.20:0,72,2325	1/1:3,4:7:9.03:213,9,0	0/0:16,0:16:36.12:0,36,1232	0/0:29,0:29:87.30:0,87,3100	0/0:35,0:35:96.33:0,96,3373	0/0:10,0:10:30.10:0,30,1070	0/0:18,0:18:48.16:0,48,1710	0/0:17,0:17:51.18:0,51,1792	1/1:0,20:20:54.19:1276,54,0	0/0:28,0:28:81.28:0,81,2889	0/0:27,0:27:78.27:0,78,2777	0/0:7,0:7:21.07:0,21,749
chr10	17342692	.	C	CTGTG	687.98	PASS	AB=1.000;AC=21;AF=0.525;AN=40;BaseQRankSum=-2.347;DP=652;FS=7.544;HRun=0;HaplotypeScore=126.6917;InbreedingCoeff=0.4112;MQ=64.52;MQ0=23;MQRankSum=0.894;QD=2.28;ReadPosRankSum=-0.168;VQSLOD=1.9534;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:37,0:36:6:79,6,0	./.	./.	./.	0/0:17,0:17:3.01:0,3,45	./.	./.	./.	0/0:25,0:29:2.90:0,3,16	0/1:22,0:22:8.06:17,0,8	./.	1/1:23,0:22:13.20:147,13,0	1/1:30,0:29:9.69:184,10,0	1/1:20,0:20:1.93:60,2,0	0/1:27,0:25:0:0,0,0	1/1:26,0:26:0.47:1,0,0	0/0:24,0:23:11.51:0,12,170	0/0:21,0:17:2.60:0,3,27	1/1:18,0:16:0.47:1,0,0	./.	0/0:39,0:38:3:0,3,28	1/1:20,0:19:18:227,18,0	1/1:21,0:20:3:25,3,0	1/1:29,5:34:3.01:68,3,0	0/0:13,0:18:2.98:0,3,22	0/1:22,0:22:0:0,0,0	0/0:22,0:22:3.01:0,3,45	0/0:7,0:6:6.02:0,6,90
chr10	17344181	.	G	GAAAAA	5795.21	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-5.903;DP=608;FS=5.095;HRun=9;HaplotypeScore=111.1112;InbreedingCoeff=0.9780;MQ=74.34;MQ0=1;MQRankSum=-8.291;QD=45.28;ReadPosRankSum=-0.978;VQSLOD=3.2440;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:78.20:0,78,1239	0/0:3,0:3:9.03:0,9,149	0/0:18,0:18:29.38:0,29,491	0/0:19,0:19:38.95:0,39,574	0/0:34,0:34:78.07:0,78,1235	1/1:4,23:29:51.18:1371,51,0	1/1:5,6:11:15.05:399,15,0	0/0:32,0:32:72.10:0,72,1131	0/0:26,0:26:69.18:0,69,1143	0/0:30,0:30:69.15:0,69,1142	0/0:22,0:22:56.66:0,57,904	0/0:16,0:16:45.12:0,45,745	0/0:16,0:16:39.06:0,39,644	0/0:25,0:25:72.17:0,72,1118	1/1:6,13:21:23.81:591,24,0	1/1:7,13:24:42.14:1129,42,0	0/0:29,0:29:81.20:0,81,1283	1/1:5,13:21:45.15:1163,45,0	0/0:29,0:30:77.60:0,78,1114	0/0:13,0:13:39.12:0,39,621	0/0:8,0:8:12.03:0,12,199	0/0:15,0:15:27.04:0,27,447	0/0:23,0:23:41.54:0,42,690	0/0:18,0:18:54.18:0,54,895	1/1:3,17:21:42.14:1143,42,0	0/0:33,0:33:84.18:0,84,1345	0/0:26,0:26:66.08:0,66,1062	0/0:17,0:17:29.19:0,29,417
chr10	17345940	.	T	TA	5184.28	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-14.289;DP=647;FS=1.645;HRun=2;HaplotypeScore=58.9429;InbreedingCoeff=0.9907;MQ=82.05;MQ0=0;MQRankSum=-1.599;QD=39.57;ReadPosRankSum=0.963;VQSLOD=5.3593;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:93.24:0,93,1123	0/0:18,0:18:51.16:0,51,632	0/0:22,0:22:60.19:0,60,732	0/0:12,0:12:12.21:0,12,269	0/0:40,0:40:99:0,117,1437	1/1:0,29:29:81.27:1167,81,0	1/1:1,23:23:66.22:950,66,0	0/0:24,0:24:63.19:0,63,772	0/0:20,0:20:60.19:0,60,744	0/0:39,0:39:99:0,111,1355	0/0:31,0:31:93.29:0,93,1153	0/0:18,0:18:54.16:0,54,657	0/0:29,0:29:84.26:0,84,1041	0/0:18,0:18:51.16:0,51,632	1/1:0,32:31:90.30:1296,90,0	1/1:1,17:18:51.17:735,51,0	0/0:24,0:24:66.19:0,66,803	1/1:0,12:12:33.11:475,33,0	0/0:19,0:19:53.38:0,53,639	0/0:27,0:27:78.24:0,78,967	0/0:11,0:11:33.10:0,33,409	0/0:14,0:14:39.12:0,39,483	0/0:25,0:25:69.22:0,69,855	0/0:12,0:12:36.11:0,36,446	1/1:1,15:16:39.13:562,39,0	0/0:30,0:30:90.28:0,90,1116	0/0:46,0:46:99:0,135,1673	0/0:5,0:5:15.05:0,15,186
chr10	17348272	.	GT	G	1004.50	PASS	AB=0.925;AC=16;AF=0.286;AN=56;BaseQRankSum=5.544;DP=494;FS=1.884;HRun=10;HaplotypeScore=69.2985;InbreedingCoeff=0.5980;MQ=54.69;MQ0=60;MQRankSum=-1.296;QD=5.87;ReadPosRankSum=0.422;VQSLOD=1.2281;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:17,1:15:4.98:5,0,178	0/0:11,0:11:33.07:0,33,354	0/0:10,0:5:11.46:0,11,67	0/1:12,1:6:22.86:23,0,67	0/0:33,1:33:27.94:0,28,475	1/1:1,12:12:12:104,12,0	1/1:1,16:12:14.99:130,15,0	0/0:10,0:20:40.76:0,41,252	0/0:14,0:13:11.99:0,12,119	0/1:15,2:15:15.73:16,0,295	0/0:19,1:19:4.68:0,5,255	0/0:17,0:13:20.96:0,21,205	0/0:13,0:12:8.69:0,9,86	0/0:16,0:15:24.02:0,24,252	1/1:2,17:15:9:78,9,0	1/1:0,13:12:14.61:130,15,0	0/1:12,1:12:7.99:8,0,147	1/1:0,18:16:18:155,18,0	0/0:4,0:13:31.56:0,32,177	0/0:6,0:30:51.79:0,52,297	0/0:2,0:9:19.89:0,20,99	0/0:15,0:15:15.04:0,15,161	0/0:26,0:26:57.15:0,57,626	0/0:16,0:11:21.06:0,21,232	1/1:3,27:29:62.66:541,63,0	0/0:16,0:13:27.07:0,27,298	0/0:22,1:20:5.95:0,6,314	0/0:10,0:10:23.97:0,24,238
chr10	17351413	.	C	CT	13883.73	PASS	AB=1.000;AC=37;AF=0.661;AN=56;BaseQRankSum=-11.735;DP=592;FS=1.491;HRun=3;HaplotypeScore=60.7972;InbreedingCoeff=0.9045;MQ=68.73;MQ0=0;MQRankSum=-1.010;QD=33.29;ReadPosRankSum=2.144;VQSLOD=5.3092;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:54.10:0,54,626	1/1:4,4:8:18.03:232,18,0	0/0:17,0:17:27.51:0,28,440	0/1:14,0:13:21.15:21,0,255	1/1:3,27:30:81.26:1117,81,0	1/1:1,18:19:48.16:672,48,0	1/1:2,16:18:33.11:463,33,0	1/1:0,25:25:75.25:1047,75,0	0/0:21,0:21:60.12:0,60,670	1/1:3,32:35:96.29:1300,96,0	1/1:3,13:16:42.09:546,42,0	0/0:18,0:18:47.17:0,47,545	0/0:13,0:13:36.10:0,36,422	0/0:18,0:18:51.14:0,51,600	1/1:2,29:31:75.25:1050,75,0	1/1:2,16:18:6.16:499,6,0	1/1:3,20:24:57.19:787,57,0	1/1:0,19:19:45.15:626,45,0	1/1:1,19:20:57.14:755,57,0	1/1:5,22:27:58.07:783,58,0	1/1:3,19:22:48.16:672,48,0	0/0:25,0:25:69.20:0,69,817	0/0:29,0:29:81.25:0,81,969	0/0:14,0:14:39:0,39,427	1/1:1,30:31:84.28:1176,84,0	1/1:3,18:21:54.18:755,54,0	1/1:2,21:23:54.18:755,54,0	1/1:0,16:16:45.15:627,45,0
chr10	17352261	.	C	CT	1918.24	PASS	AB=0.845;AC=20;AF=0.357;AN=56;BaseQRankSum=0.480;DP=491;FS=0.437;HRun=13;HaplotypeScore=88.1348;InbreedingCoeff=0.5725;MQ=65.46;MQ0=0;MQRankSum=-2.791;QD=8.56;ReadPosRankSum=-2.138;VQSLOD=2.4868;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,1:23:10.32:0,10,205	0/1:9,1:10:1.69:2,0,124	0/1:15,0:12:1.95:2,0,18	0/0:7,0:5:4.58:0,5,18	0/0:20,0:21:34.77:0,35,218	1/1:12,1:20:43.58:271,44,0	1/1:4,2:14:25.89:156,26,0	0/1:17,17:34:3.83:381,0,4	0/0:17,0:19:33.69:0,34,213	0/0:17,0:17:28.71:0,29,190	0/0:15,0:16:36.74:0,37,236	0/0:10,0:11:22.82:0,23,150	0/0:19,0:19:20.62:0,21,144	0/0:9,0:10:13.88:0,14,88	1/1:10,1:15:35.28:240,35,0	1/1:13,0:22:38.80:220,39,0	0/0:17,0:19:22.75:0,23,148	1/1:11,0:20:31.63:177,32,0	0/1:11,4:18:24.16:96,0,24	1/1:8,14:22:18.35:296,18,0	0/1:5,1:6:18.95:19,0,32	0/0:15,0:18:41.69:0,42,258	0/0:16,0:18:5.83:0,6,139	0/0:10,0:11:13.86:0,14,88	1/1:11,1:20:40.48:240,40,0	0/0:19,0:19:38.57:0,39,264	0/0:34,0:37:68.24:0,68,445	0/1:7,1:8:12.99:13,0,67
chr10	17352294	.	CT	C	2855.33	PASS	AB=0.795;AC=30;AF=0.536;AN=56;BaseQRankSum=-1.977;DP=485;FS=2.440;HRun=14;HaplotypeScore=75.0285;InbreedingCoeff=0.5259;MQ=64.04;MQ0=1;MQRankSum=0.493;QD=9.39;ReadPosRankSum=2.781;VQSLOD=3.3499;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:9,11:22:5.69:110,0,6	0/1:5,7:12:10.12:85,0,10	0/1:10,0:7:7.98:8,0,21	0/1:10,0:8:14.39:32,0,14	1/1:12,11:25:30.62:196,31,0	0/0:9,0:20:40.07:0,40,213	0/0:10,0:13:23.33:0,23,142	0/0:32,3:37:9.31:0,9,524	0/0:16,1:18:15.27:0,15,264	1/1:6,14:22:47.69:305,48,0	1/1:2,14:18:38.84:256,39,0	1/1:2,10:14:21.93:135,22,0	1/1:2,11:14:13.05:189,13,0	1/1:3,7:11:25.78:170,26,0	0/0:7,0:14:26.84:0,27,128	0/0:6,0:19:37.48:0,37,216	0/1:10,9:20:23.05:139,0,23	0/0:5,1:14:5.55:0,6,112	0/1:9,2:11:14.14:14,0,168	0/0:21,2:24:9.48:0,9,329	0/0:2,0:3:2.17:0,2,50	1/1:7,8:18:29.79:182,30,0	1/1:4,19:23:53.45:370,53,0	1/1:2,5:8:18.16:112,18,0	0/0:7,0:18:38.49:0,38,202	1/1:5,10:17:30.74:196,31,0	1/1:11,20:36:63.45:397,63,0	1/1:4,8:12:6.51:161,7,0
chr10	17354227	.	GT	G	2912.83	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=11.772;DP=689;FS=0.817;HRun=8;HaplotypeScore=66.6265;InbreedingCoeff=0.9913;MQ=61.46;MQ0=4;MQRankSum=-2.063;QD=21.58;ReadPosRankSum=-0.516;VQSLOD=3.7370;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,99,1184	0/0:13,0:13:39.10:0,39,450	0/0:22,0:17:18.65:0,19,311	0/0:24,0:13:17.27:0,17,186	0/0:47,0:47:99:0,126,1507	1/1:0,21:21:63.10:608,63,0	1/1:1,14:14:13.45:244,13,0	0/0:27,0:27:60.18:0,60,724	0/0:24,0:24:60.18:0,60,722	0/0:36,0:36:96.29:0,96,1158	0/0:24,0:24:69.21:0,69,832	0/0:16,0:16:26.17:0,26,345	0/0:27,0:27:69.20:0,69,820	0/0:21,0:21:54.15:0,54,637	1/1:1,29:30:78.13:753,78,0	1/1:2,21:23:23.86:514,24,0	0/0:29,0:29:81.25:0,81,977	1/1:2,16:18:42.06:405,42,0	0/0:14,0:14:42.13:0,42,505	0/0:22,0:22:61.07:0,61,725	0/0:23,0:23:54.15:0,54,641	0/0:21,0:21:57.17:0,57,688	0/0:22,0:22:63.18:0,63,748	0/0:19,0:19:54.15:0,54,640	1/1:5,23:28:57.50:575,58,0	0/0:35,0:35:99:0,102,1213	0/0:31,0:31:84.26:0,84,1014	0/0:16,0:16:48.12:0,48,549
chr10	17354316	.	G	GTTT	3535.33	PASS	AB=0.917;AC=13;AF=0.232;AN=56;BaseQRankSum=-1.826;DP=554;FS=0.996;HRun=13;HaplotypeScore=85.1348;InbreedingCoeff=0.8707;MQ=60.28;MQ0=1;MQRankSum=-4.237;QD=25.25;ReadPosRankSum=-3.575;VQSLOD=2.1418;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:68.09:0,68,692	0/0:8,0:8:14.87:0,15,161	0/1:10,0:9:8.85:9,0,87	0/0:8,0:5:5.50:0,5,40	0/0:20,0:20:38.80:0,39,411	1/1:13,6:20:42.04:582,42,0	1/1:5,6:11:15.05:257,15,0	0/0:30,0:31:66.39:0,66,693	0/0:20,0:23:32.49:0,32,298	0/0:18,0:23:17.18:0,17,213	0/0:24,0:26:35.41:0,35,414	0/0:16,0:17:32.92:0,33,355	0/0:19,0:20:29.77:0,30,308	0/0:11,0:12:20.78:0,21,211	1/1:17,8:26:47.14:662,47,0	1/1:15,6:22:32.87:492,33,0	0/0:26,0:26:56.78:0,57,586	1/1:9,6:16:28.34:474,28,0	0/0:8,0:8:11.88:0,12,129	0/0:22,0:23:53.82:0,54,566	0/0:11,0:11:14.87:0,15,160	0/0:12,0:12:17.89:0,18,194	0/0:22,0:22:38.61:0,39,419	0/0:19,0:19:39.04:0,39,419	1/1:14,13:32:70.37:1059,70,0	0/0:26,0:28:54.97:0,55,581	0/0:22,0:23:57.04:0,57,587	0/0:16,0:16:35.52:0,36,386
chr10	17354890	.	CGTT	C	3941.85	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=12.260;DP=686;FS=1.923;HRun=0;HaplotypeScore=93.1998;InbreedingCoeff=0.9981;MQ=69.80;MQ0=0;MQRankSum=-2.651;QD=31.53;ReadPosRankSum=3.217;VQSLOD=3.8826;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:60.21:0,60,1216	0/0:10,0:10:21.06:0,21,402	0/0:22,0:23:51.18:0,51,1040	0/0:19,0:19:36.10:0,36,707	0/0:38,0:38:84.27:0,84,1702	1/1:2,24:25:66.22:986,66,0	1/1:3,9:12:21.07:314,21,0	0/0:45,0:45:93.26:0,93,1788	0/0:28,0:28:75.20:0,75,1441	0/0:31,0:31:78.27:0,78,1626	0/0:26,0:26:63.22:0,63,1276	0/0:23,0:23:54.16:0,54,1040	0/0:39,0:39:99:0,102,2087	0/0:25,0:25:63.17:0,63,1202	1/1:3,18:21:48.16:716,48,0	1/1:5,14:19:36.12:537,36,0	0/0:30,0:30:78.27:0,78,1585	1/1:3,14:17:33.11:493,33,0	0/0:20,0:20:48.15:0,48,935	0/0:32,0:32:93.32:0,93,1926	0/0:16,0:16:33.11:0,33,648	0/0:25,0:25:69.24:0,69,1420	0/0:19,0:19:54.18:0,54,1094	0/0:19,0:19:51.16:0,51,1028	1/1:6,24:30:60.20:896,60,0	0/0:29,0:29:63.20:0,63,1241	0/0:22,0:21:57.20:0,57,1178	0/0:18,0:18:30.10:0,30,628
chr10	17356112	.	G	GT	4908.35	PASS	AB=0.726;AC=34;AF=0.607;AN=56;BaseQRankSum=0.126;DP=681;FS=3.327;HRun=13;HaplotypeScore=86.7758;InbreedingCoeff=0.6123;MQ=75.87;MQ0=5;MQRankSum=1.295;QD=10.65;ReadPosRankSum=-0.571;VQSLOD=4.4107;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,1:33:6.76:0,7,322	1/1:2,1:9:20.05:114,20,0	0/0:58,0:28:6.70:0,7,84	0/1:32,0:18:9.47:9,0,20	1/1:9,1:34:51.24:356,51,0	1/1:6,13:18:3.45:174,3,0	0/1:5,8:14:17.33:122,0,17	1/1:16,18:35:25.65:438,26,0	0/0:22,0:22:44.90:0,45,286	1/1:8,7:37:62.29:460,62,0	1/1:8,7:25:26.22:265,26,0	0/0:16,1:18:15.83:0,16,245	0/0:16,0:16:34.51:0,35,222	0/0:24,2:28:37.98:0,38,376	1/1:5,13:21:29.97:262,30,0	1/1:5,14:19:9.72:231,10,0	1/1:3,2:17:11.29:157,11,0	1/1:5,13:19:12.31:244,12,0	0/1:20,13:34:9.99:293,0,10	1/1:10,24:38:69.96:582,70,0	0/1:3,7:10:5.50:93,0,5	0/0:15,0:15:35.62:0,36,246	0/0:18,1:20:3.81:0,4,163	0/0:9,0:9:20.80:0,21,142	1/1:5,9:16:2.55:183,3,0	1/1:9,5:36:76.74:494,77,0	1/1:5,3:32:57.75:356,58,0	1/1:4,2:11:14.31:75,14,0
chr10	17356359	.	G	GA	3877.77	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-3.135;DP=708;FS=5.344;HRun=7;HaplotypeScore=70.5057;InbreedingCoeff=0.9966;MQ=76.17;MQ0=0;MQRankSum=-2.080;QD=30.06;ReadPosRankSum=2.548;VQSLOD=4.2225;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:93.12:0,93,890	0/0:17,0:17:48.08:0,48,464	0/0:22,0:22:38.99:0,39,487	0/0:19,0:19:34.96:0,35,305	0/0:40,0:39:99:0,102,972	1/1:5,16:21:42.13:507,42,0	1/1:2,19:21:54.17:652,54,0	0/0:38,0:37:78.08:0,78,742	0/0:20,0:20:57.09:0,57,550	0/0:34,0:34:90.13:0,90,865	0/0:27,0:28:71.14:0,71,672	0/0:26,0:26:75.08:0,75,712	0/0:29,0:29:66.07:0,66,626	0/0:31,0:31:81.09:0,81,770	1/1:1,30:31:81.25:979,81,0	1/1:1,23:24:69.21:834,69,0	0/0:25,0:25:72.12:0,72,695	1/1:1,5:6:15.05:181,15,0	0/0:25,0:25:66.08:0,66,628	0/0:38,0:38:99:0,105,1014	0/0:11,0:11:30.04:0,30,290	0/0:15,0:15:45.06:0,45,426	0/0:25,0:25:72.10:0,72,690	0/0:23,0:23:60.09:0,60,579	1/1:3,23:26:60.18:725,60,0	0/0:33,0:33:96.14:0,96,923	0/0:36,0:36:99:0,99,951	0/0:11,0:11:33.05:0,33,319
chr10	17356998	.	CTT	C	1751.67	PASS	AB=0.889;AC=13;AF=0.232;AN=56;BaseQRankSum=-3.472;DP=556;FS=0.000;HRun=15;HaplotypeScore=76.6993;InbreedingCoeff=0.8652;MQ=60.45;MQ0=7;MQRankSum=2.752;QD=14.60;ReadPosRankSum=5.610;VQSLOD=2.7953;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:27:54.06:0,54,651	0/0:2,0:8:24.04:0,24,249	0/0:27,0:5:6.02:0,6,70	0/0:21,0:10:3.99:0,4,109	0/0:12,0:29:51.02:0,51,503	1/1:0,16:16:44.99:396,45,0	1/1:4,10:14:23.97:211,24,0	0/0:16,0:33:56.89:0,57,527	0/0:10,0:11:19.35:0,19,201	0/0:4,0:26:69.11:0,69,698	0/0:7,0:24:57.02:0,57,548	0/0:19,0:21:41.58:0,42,492	0/0:21,0:21:52.38:0,52,651	0/0:12,0:12:32.49:0,32,342	1/1:7,9:15:17.86:151,18,0	1/1:2,16:20:47.44:394,47,0	0/0:9,0:27:48.01:0,48,473	1/1:3,22:25:59.95:528,60,0	0/0:12,0:21:38.92:0,39,423	0/0:8,0:29:51.04:0,51,494	0/0:2,0:11:12.01:0,12,113	0/0:14,0:14:30.04:0,30,373	0/1:7,1:8:4.51:5,0,206	0/0:8,0:8:18.06:0,18,244	1/1:6,12:21:26.26:253,26,0	0/0:10,0:28:69.04:0,69,680	0/0:11,0:27:51:0,51,520	0/0:1,0:8:15.02:0,15,148
chr10	17357178	.	GTCC	G	7401.63	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=12.711;DP=549;FS=3.980;HRun=0;HaplotypeScore=80.7281;InbreedingCoeff=0.9980;MQ=60.22;MQ0=9;MQRankSum=-2.591;QD=50.35;ReadPosRankSum=4.128;VQSLOD=6.8362;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:31:81.28:0,81,1975	1/1:0,6:6:18.06:335,18,0	0/0:10,0:9:27.09:0,27,607	0/0:18,0:13:39.13:0,39,947	1/1:0,24:24:60.21:1117,60,0	0/0:20,0:19:51.18:0,51,1255	0/0:12,0:11:30.10:0,30,738	0/0:40,0:40:99:0,120,2904	0/0:22,0:22:54.19:0,54,1320	1/1:2,19:19:57.20:1052,57,0	1/1:0,13:13:39.13:726,39,0	0/0:12,0:12:30.10:0,30,739	0/0:21,0:21:63.22:0,63,1533	0/0:13,0:13:33:0,33,812	0/0:18,0:16:39.13:0,39,957	0/0:27,0:26:78.27:0,78,1902	1/1:2,25:26:69.24:1285,69,0	0/0:14,0:14:36.12:0,36,886	0/0:16,0:16:48.16:0,48,1182	0/0:28,0:27:75.26:0,75,1804	0/0:26,0:26:72.25:0,72,1737	0/0:15,0:15:45.15:0,45,1107	0/0:10,0:9:27.09:0,27,664	0/0:23,0:22:57.20:0,57,1403	0/0:24,0:22:57.20:0,57,1404	1/1:1,28:29:84.29:1546,84,0	1/1:0,13:13:36.12:670,36,0	1/1:0,14:14:36.12:671,36,0
chr10	17357263	.	GT	G	2297.22	PASS	AB=0.809;AC=29;AF=0.518;AN=56;BaseQRankSum=4.262;DP=285;FS=6.895;HRun=10;HaplotypeScore=49.7422;InbreedingCoeff=0.7562;MQ=69.79;MQ0=0;MQRankSum=-2.587;QD=14.18;ReadPosRankSum=2.979;VQSLOD=3.4071;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:24.03:0,24,253	1/1:0,6:6:14.99:130,15,0	0/1:11,1:12:10.60:11,0,115	0/0:3,0:3:6.02:0,6,79	1/1:3,11:14:23.97:205,24,0	1/1:3,11:13:26.98:234,27,0	1/1:0,2:2:6:52,6,0	0/0:18,1:19:16.08:0,16,393	0/0:10,0:10:18.05:0,18,199	1/1:5,11:16:32.96:286,33,0	1/1:0,11:11:32.99:286,33,0	0/0:11,0:11:21.02:0,21,219	0/0:11,0:11:18.04:0,18,194	0/0:7,0:7:18.05:0,18,199	1/1:3,7:10:15:130,15,0	0/1:3,7:10:12.16:135,0,12	1/1:0,7:7:15:130,15,0	1/1:2,4:6:8.99:78,9,0	0/1:10,1:11:2.32:2,0,186	0/0:24,0:24:63.07:0,63,649	0/0:6,0:6:13.57:0,14,127	0/0:5,0:5:15.04:0,15,166	0/0:9,0:9:27.07:0,27,298	0/0:7,0:7:9.02:0,9,100	1/1:2,9:11:23.99:208,24,0	1/1:2,10:12:29.99:260,30,0	1/1:2,9:11:26.99:234,27,0	1/1:3,6:9:14.96:130,15,0
chr10	17359154	.	TAAG	T	6022.33	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=11.558;DP=529;FS=12.362;HRun=0;HaplotypeScore=106.0169;InbreedingCoeff=0.9909;MQ=59.16;MQ0=8;MQRankSum=-1.363;QD=40.69;ReadPosRankSum=3.729;VQSLOD=5.9227;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,23:25:66.23:1099,66,0	0/0:5,0:5:12.04:0,12,272	0/0:14,0:8:14.58:0,15,386	0/0:17,0:10:27.07:0,27,538	0/0:19,0:16:48.16:0,48,1088	0/0:16,0:16:48.16:0,48,1046	0/0:18,0:18:51.18:0,51,1156	0/0:28,0:26:75.25:0,75,1644	1/1:2,16:18:42.14:699,42,0	0/0:27,0:27:69.23:0,69,1516	0/0:13,0:13:39.13:0,39,869	1/1:2,15:17:42.14:699,42,0	1/1:0,18:18:48.13:770,48,0	1/1:0,18:18:42.14:700,42,0	0/0:23,0:23:69.21:0,69,1461	0/0:19,0:19:57.20:0,57,1277	0/0:27,0:27:78.25:0,78,1724	0/0:20,0:20:60.18:0,60,1314	0/0:14,0:11:33.11:0,33,747	0/0:27,0:27:72.25:0,72,1625	0/0:17,0:17:48.15:0,48,1044	1/1:1,20:20:57.19:949,57,0	1/1:0,19:18:47.97:799,48,0	1/1:0,12:12:20.57:308,21,0	0/0:19,0:19:54.19:0,54,1224	0/0:19,0:19:57.20:0,57,1279	0/0:22,0:22:60.20:0,60,1316	0/0:17,0:17:51.18:0,51,1150
chr10	17359615	.	GTAC	G	8138.48	PASS	AB=0.719;AC=20;AF=0.357;AN=56;BaseQRankSum=13.187;DP=645;FS=1.904;HRun=0;HaplotypeScore=92.6136;InbreedingCoeff=0.8405;MQ=82.78;MQ0=2;MQRankSum=-5.967;QD=36.83;ReadPosRankSum=0.221;VQSLOD=5.2890;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,123,2741	0/1:7,1:8:28.90:29,0,387	0/0:24,0:24:69.24:0,69,1512	0/0:25,0:25:61.44:0,61,1225	0/0:21,0:21:57.20:0,57,1292	1/1:2,22:22:57.19:949,57,0	1/1:0,22:19:51.13:819,51,0	1/1:2,25:23:63.22:1043,63,0	0/0:38,0:38:99:0,114,2534	0/0:22,0:22:63.22:0,63,1412	0/0:16,0:16:48.16:0,48,1088	0/0:24,0:24:66.23:0,66,1496	0/0:29,0:29:84.29:0,84,1886	0/0:38,0:38:99:0,108,2425	1/1:0,23:23:57.19:949,57,0	0/1:3,14:17:22.85:634,0,23	0/0:23,0:21:60.21:0,60,1360	1/1:1,17:16:33.11:550,33,0	1/1:1,19:14:33.10:517,33,0	1/1:0,16:16:45.15:749,45,0	1/1:2,26:28:69.24:1149,69,0	0/0:18,0:18:54.19:0,54,1207	0/0:20,0:20:60.21:0,60,1329	0/0:29,0:29:87.30:0,87,1969	1/1:2,16:18:45.15:749,45,0	0/0:22,0:22:66.23:0,66,1480	0/0:27,0:26:78.27:0,78,1751	0/0:5,0:5:12.04:0,12,272
chr10	17360827	.	GTTT	G	4020.75	PASS	AB=0.591;AC=17;AF=0.304;AN=56;BaseQRankSum=-4.767;DP=569;FS=8.783;HRun=14;HaplotypeScore=95.9384;InbreedingCoeff=0.9064;MQ=77.98;MQ0=11;MQRankSum=-3.222;QD=23.11;ReadPosRankSum=2.613;VQSLOD=2.4656;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:13:36.12:0,36,635	1/1:0,11:11:33.10:386,33,0	0/0:84,0:28:41.06:0,41,473	0/0:66,0:22:23.92:0,24,242	1/1:5,20:26:55.55:619,56,0	0/0:4,0:17:41.88:0,42,362	0/0:4,0:15:17.94:0,18,139	0/0:10,0:20:29.56:0,30,479	0/0:9,0:11:25.33:0,25,439	1/1:3,18:21:54.13:631,54,0	1/1:9,12:21:29.99:350,30,0	0/0:7,0:7:15.05:0,15,265	0/0:7,0:10:27.03:0,27,389	0/0:14,0:15:33.09:0,33,555	0/1:4,0:13:12.51:13,0,135	0/0:3,0:14:25.20:0,25,191	1/1:7,18:26:40.46:488,40,0	0/0:5,0:21:47.83:0,48,379	0/0:9,0:19:42.03:0,42,578	0/0:4,0:18:39.08:0,39,444	0/0:3,0:8:15.05:0,15,213	0/0:8,0:8:21.07:0,21,360	0/0:15,0:16:36.12:0,36,641	0/0:9,0:9:27.08:0,27,470	0/0:3,0:20:47.85:0,48,402	1/1:2,23:25:69.16:796,69,0	1/1:7,20:27:51.52:597,52,0	1/1:0,4:4:12.04:140,12,0
chr10	17361293	.	TTGC	T	7594.79	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=14.622;DP=679;FS=2.010;HRun=0;HaplotypeScore=95.9900;InbreedingCoeff=0.9936;MQ=81.29;MQ0=0;MQRankSum=-4.128;QD=47.47;ReadPosRankSum=3.700;VQSLOD=7.1523;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:96.33:0,96,2326	0/0:10,0:10:30.10:0,30,714	0/0:16,0:16:38.43:0,38,708	0/0:19,0:19:51.13:0,51,1051	0/0:18,0:18:54.19:0,54,1286	1/1:0,34:34:96.33:1789,96,0	1/1:0,27:27:72.25:1341,72,0	0/0:24,0:24:72.25:0,72,1755	0/0:27,0:27:81.27:0,81,1946	0/0:16,0:16:45.14:0,45,938	0/0:17,0:17:48.16:0,48,1172	0/0:29,0:29:84.26:0,84,1949	0/0:26,0:26:78.25:0,78,1846	0/0:18,0:18:51.17:0,51,1204	1/1:0,37:37:90.18:1675,90,0	1/1:0,19:19:48.16:894,48,0	0/0:47,0:47:99:0,141,3284	1/1:0,21:21:48.16:895,48,0	0/0:17,0:17:48.15:0,48,1069	0/0:28,0:28:84.24:0,84,1888	0/0:54,0:54:99:0,163,3872	0/0:15,0:15:45.14:0,45,1015	0/0:18,0:18:54.18:0,54,1253	0/0:27,0:27:81.22:0,81,1810	1/1:0,22:22:54.19:1001,54,0	0/0:34,0:34:99:0,102,2239	0/0:23,0:23:69.23:0,69,1621	0/0:4,0:4:12.04:0,12,296
chr10	17362844	.	AACAAC	A	7884.99	PASS	AB=1.000;AC=32;AF=0.571;AN=56;BaseQRankSum=-0.703;DP=564;FS=8.689;HRun=0;HaplotypeScore=152.1618;InbreedingCoeff=0.7209;MQ=62.22;MQ0=7;MQRankSum=0.751;QD=20.01;ReadPosRankSum=0.814;VQSLOD=4.0542;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:77.17:0,77,1331	1/1:10,0:10:23.90:152,24,0	0/0:27,0:16:37.50:0,38,755	0/1:16,0:11:5.20:5,0,453	1/1:31,0:31:20.90:389,21,0	1/1:0,22:22:39.13:869,39,0	1/1:1,13:14:24.08:451,24,0	0/1:18,0:16:37.40:68,0,37	0/0:7,0:7:15.63:0,16,324	1/1:26,0:26:70.94:520,71,0	1/1:22,0:21:43.45:375,43,0	0/0:17,0:17:33.95:0,34,751	0/0:18,0:18:11.05:0,11,708	0/0:14,0:14:38.88:0,39,708	1/1:1,17:18:33.11:699,33,0	1/1:0,24:24:42.14:936,42,0	1/1:34,0:34:70.30:467,70,0	1/1:2,31:34:48.13:980,48,0	0/0:14,0:12:35.84:0,36,416	0/1:25,0:25:21.07:21,0,683	0/1:8,0:8:13.69:14,0,21	0/0:9,0:9:26.49:0,26,323	0/0:14,0:14:38.87:0,39,672	0/0:12,0:12:29.23:0,29,485	1/1:2,13:15:42.14:870,42,0	1/1:23,0:23:57.77:330,58,0	1/1:36,0:36:73.60:489,74,0	1/1:18,0:18:26.57:250,27,0
chr10	17362845	.	AC	A	5650.90	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=8.794;DP=573;FS=5.546;HRun=1;HaplotypeScore=126.2023;InbreedingCoeff=0.9377;MQ=62.14;MQ0=7;MQRankSum=-2.215;QD=15.83;ReadPosRankSum=1.772;VQSLOD=5.0593;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:98.08:0,98,1110	1/1:3,7:10:27.36:224,27,0	0/0:27,0:16:38.88:0,39,478	0/0:15,1:11:21.16:0,21,327	1/1:19,13:32:33.42:551,33,0	1/1:22,0:22:33.75:130,34,0	1/1:14,0:14:20.16:93,20,0	1/1:18,1:17:23.54:258,24,0	0/0:8,0:8:18.27:0,18,251	1/1:8,19:28:80.38:712,80,0	1/1:10,13:22:62.65:537,63,0	0/0:18,0:18:37.52:0,38,515	0/0:18,0:18:35.70:0,36,586	0/0:16,0:16:38.42:0,38,539	1/1:17,0:18:28.71:112,29,0	1/1:24,0:24:36.35:140,36,0	1/1:11,23:34:92.30:772,92,0	1/1:33,0:34:41.87:179,42,0	0/0:14,0:12:35.70:0,36,326	0/0:23,1:24:7.09:0,7,358	1/1:6,1:7:4.79:53,5,0	0/0:10,0:10:29.85:0,30,315	0/0:14,0:14:38.95:0,39,523	0/0:12,0:12:29.37:0,29,387	1/1:15,0:15:1.72:89,2,0	1/1:10,13:23:58.33:545,58,0	1/1:11,25:36:84.60:813,85,0	1/1:9,9:18:47.41:443,47,0
chr10	17362847	.	AAC	A	8050.65	PASS	AB=1.000;AC=38;AF=0.679;AN=56;BaseQRankSum=4.621;DP=570;FS=2.889;HRun=0;HaplotypeScore=124.4600;InbreedingCoeff=0.5570;MQ=62.42;MQ0=6;MQRankSum=-0.058;QD=16.81;ReadPosRankSum=0.183;VQSLOD=4.9465;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:38,0:38:63.73:64,0,288	1/1:9,1:10:24.97:282,25,0	0/0:23,0:14:32.91:0,33,408	0/0:14,0:11:0.49:0,0,276	1/1:29,1:30:42.10:653,42,0	1/1:22,0:22:38.91:316,39,0	1/1:14,0:14:22.94:168,23,0	0/1:20,0:18:10.53:72,0,11	0/0:9,0:9:14.15:0,14,95	1/1:26,3:29:80.67:902,81,0	1/1:20,3:22:59.92:577,60,0	0/1:17,0:17:0.91:1,0,169	0/1:18,0:18:40.48:40,0,174	0/0:17,0:17:8.20:0,8,159	1/1:18,0:18:32.85:261,33,0	1/1:24,0:24:41.90:342,42,0	1/1:32,2:34:92.31:1008,92,0	1/1:34,0:34:47.68:376,48,0	1/1:14,0:12:9.33:46,9,0	1/1:28,0:28:20.60:153,21,0	0/1:8,0:8:1.91:30,0,2	0/1:10,0:10:0.90:1,0,98	0/0:14,0:14:32.56:0,33,186	0/0:13,0:13:28.53:0,29,163	1/1:15,0:15:40.96:329,41,0	1/1:21,1:22:62.48:814,62,0	1/1:32,3:35:84.95:1129,85,0	1/1:16,0:16:35.58:487,36,0
chr10	17362848	.	AC	A	6824.46	PASS	AB=0.988;AC=43;AF=0.768;AN=56;BaseQRankSum=6.446;DP=566;FS=4.146;HRun=1;HaplotypeScore=120.0741;InbreedingCoeff=0.3282;MQ=62.55;MQ0=4;MQRankSum=-2.015;QD=13.20;ReadPosRankSum=-0.711;VQSLOD=3.6096;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:37,1:38:28.66:215,0,29	1/1:5,5:10:27.40:228,27,0	0/0:22,0:14:32.46:0,32,369	0/0:13,0:11:25.68:0,26,278	1/1:21,9:30:62.72:579,63,0	1/1:22,0:22:32.54:122,33,0	1/1:14,0:14:18.73:88,19,0	1/1:19,0:17:27.20:263,27,0	0/1:9,0:9:7.77:19,0,8	1/1:17,13:30:85.19:770,85,0	1/1:17,6:23:63.68:553,64,0	0/1:16,1:17:19.65:69,0,20	0/1:18,0:18:18.12:72,0,18	0/1:17,0:17:10.29:39,0,10	1/1:18,0:18:28.22:115,28,0	1/1:24,0:24:35.54:133,36,0	1/1:18,16:34:95.32:807,95,0	1/1:34,0:34:40.01:164,40,0	1/1:12,0:10:29.37:206,29,0	1/1:27,1:28:62.15:374,62,0	1/1:9,0:9:9.87:76,10,0	0/1:10,0:10:14.30:14,0,17	0/1:13,0:13:7.30:7,0,21	0/0:13,0:13:11.88:0,12,34	1/1:15,0:15:32:118,32,0	1/1:11,11:22:62.38:566,62,0	1/1:14,21:35:95.86:823,96,0	1/1:9,7:16:43.33:405,43,0
chr10	17365918	.	TA	T	1621.72	PASS	AB=0.909;AC=13;AF=0.232;AN=56;BaseQRankSum=7.494;DP=451;FS=0.462;HRun=11;HaplotypeScore=45.0537;InbreedingCoeff=0.8265;MQ=62.51;MQ0=11;MQRankSum=0.769;QD=13.86;ReadPosRankSum=-0.097;VQSLOD=3.2311;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:62.12:0,62,813	0/0:3,0:3:6.02:0,6,64	0/0:15,0:5:4.32:0,4,59	0/1:9,1:6:12.73:13,0,57	0/0:22,1:22:35.38:0,35,564	1/1:4,14:18:35.95:296,36,0	1/1:3,8:11:20.96:172,21,0	0/0:26,1:25:35.31:0,35,493	0/0:12,0:13:35.93:0,36,356	0/0:23,1:22:35.51:0,36,583	0/0:12,0:12:33.07:0,33,344	0/0:8,0:8:24.06:0,24,256	0/0:14,0:14:39.08:0,39,408	0/0:13,1:13:14.45:0,14,359	1/1:1,13:14:29.97:246,30,0	1/1:5,21:27:26.98:417,27,0	0/0:31,0:31:84.21:0,84,896	1/1:5,20:25:53.93:443,54,0	0/0:24,0:21:51.10:0,51,533	0/0:14,0:14:33.08:0,33,346	0/0:5,0:5:15.04:0,15,160	0/0:3,0:3:6.02:0,6,64	0/0:8,0:9:14.18:0,14,178	0/0:10,0:10:26.50:0,27,238	1/1:0,12:12:26.97:222,27,0	0/0:32,0:30:78.16:0,78,816	0/0:18,0:17:42.11:0,42,448	0/0:5,0:5:12.01:0,12,119
chr10	17367312	.	G	GT	186.71	PASS	AB=0.857;AC=3;AF=0.054;AN=56;BaseQRankSum=5.631;DP=477;FS=1.058;HRun=0;HaplotypeScore=90.1530;InbreedingCoeff=0.5279;MQ=69.55;MQ0=22;MQRankSum=5.424;QD=7.18;ReadPosRankSum=-4.089;VQSLOD=2.8534;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:16:39.12:0,39,523	0/0:7,0:7:18.05:0,18,235	1/1:10,2:14:7.43:201,7,0	0/1:10,2:10:51.60:81,0,52	0/0:16,0:16:30.03:0,30,374	0/0:17,0:17:18.03:0,18,232	0/0:16,0:15:15.66:0,16,351	0/0:22,0:21:54.14:0,54,700	0/0:16,0:16:45.11:0,45,566	0/0:17,0:16:44.88:0,45,580	0/0:16,0:15:30.08:0,30,393	0/0:18,0:18:44.88:0,45,575	0/0:18,0:17:38.81:0,39,491	0/0:15,0:15:36.08:0,36,437	0/0:14,0:13:30.09:0,30,379	0/0:8,0:8:15.04:0,15,192	0/0:30,0:28:80.30:0,80,1082	0/0:12,0:10:11.99:0,12,144	0/0:21,0:20:42.07:0,42,526	0/0:28,0:25:54.14:0,54,721	0/0:22,0:19:48.57:0,49,595	0/0:18,0:18:45.12:0,45,574	0/0:17,0:17:33.10:0,33,430	0/0:25,0:25:63.16:0,63,820	0/0:13,0:10:27.08:0,27,362	0/0:22,0:20:42.08:0,42,541	0/0:17,0:17:42.12:0,42,551	0/0:7,0:5:12.04:0,12,166
chr10	17367721	.	AATAGATAGATAG	A	5256.95	PASS	AB=0.875;AC=42;AF=0.875;AN=48;BaseQRankSum=-2.410;DP=575;FS=1.920;HRun=0;HaplotypeScore=167.5711;InbreedingCoeff=0.1558;MQ=53.01;MQ0=11;MQRankSum=-1.405;QD=11.71;ReadPosRankSum=-1.979;VQSLOD=3.4158;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:26:3:29,3,0	1/1:8,5:13:5.98:96,6,0	./.	./.	1/1:13,0:23:8.58:61,9,0	1/1:10,9:19:12.04:302,12,0	./.	0/0:41,0:36:0:0,0,0	1/1:8,8:16:2.98:21,3,0	1/1:13,17:30:36.12:997,36,0	1/1:16,14:30:30.02:707,30,0	1/1:1,0:12:9.03:162,9,0	1/1:6,0:13:3.01:84,3,0	1/1:9,0:18:3.01:50,3,0	1/1:10,8:18:12.04:338,12,0	1/1:8,11:18:11.60:300,12,0	1/1:27,0:27:6.42:43,6,0	0/1:13,0:13:59.83:76,0,60	1/1:15,0:18:1.08:92,1,0	1/1:19,18:37:32.88:544,33,0	1/1:13,0:12:2.99:24,3,0	0/0:12,0:12:1.55:0,2,4	./.	0/1:7,4:12:0:0,0,0	1/1:9,12:21:12.04:372,12,0	1/1:13,11:24:33.10:704,33,0	1/1:13,13:25:3.01:101,3,0	1/1:11,5:13:6.02:154,6,0
chr10	17370129	.	AAAAG	A	1505.64	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=2.372;DP=580;FS=1.108;HRun=0;HaplotypeScore=97.0807;InbreedingCoeff=0.8451;MQ=58.58;MQ0=9;MQRankSum=-3.526;QD=11.07;ReadPosRankSum=-1.233;VQSLOD=2.4013;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:82.52:0,83,2267	0/0:7,0:7:18.03:0,18,204	0/0:13,0:6:0.44:0,0,103	0/0:8,0:2:2.09:0,2,18	0/0:22,0:22:61.89:0,62,729	1/1:1,20:21:18.02:282,18,0	1/1:5,18:21:0.25:202,0,0	0/0:24,0:24:29.17:0,29,683	0/0:30,0:30:80.20:0,80,1435	0/0:25,0:23:62.59:0,63,730	0/0:20,0:20:24.11:0,24,401	0/0:14,0:14:42.14:0,42,898	0/0:16,0:16:35.96:0,36,671	0/0:21,0:20:45.06:0,45,791	1/1:2,25:27:14.96:200,15,0	1/1:4,23:26:20.92:271,21,0	0/0:29,0:27:51.11:0,51,624	1/1:3,16:19:12:168,12,0	0/0:22,0:20:37.25:0,37,709	0/0:21,0:21:28.21:0,28,461	0/0:9,0:9:23.96:0,24,356	0/0:24,0:24:63.42:0,63,1179	0/0:22,0:22:53.81:0,54,917	0/0:26,0:26:69.13:0,69,1261	1/1:12,7:18:52:555,52,0	0/0:18,0:17:47.97:0,48,574	0/0:18,0:17:47.54:0,48,571	0/0:8,0:8:20.95:0,21,221
chr10	17370130	.	AAAG	A	1145.02	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=5.087;DP=580;FS=5.772;HRun=0;HaplotypeScore=90.4269;InbreedingCoeff=0.7732;MQ=59.43;MQ0=9;MQRankSum=-1.017;QD=7.29;ReadPosRankSum=-1.742;VQSLOD=1.6101;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:88.99:0,89,1851	0/0:7,0:7:17.49:0,17,149	0/1:13,0:6:1.35:1,0,98	0/1:9,0:3:3.67:4,0,14	0/0:23,0:23:48.08:0,48,508	1/1:21,0:21:18.01:199,18,0	0/1:23,0:21:5.40:145,0,5	0/0:24,0:24:50.04:0,50,580	0/0:29,0:29:82.98:0,83,1146	0/0:25,0:23:57.39:0,57,501	0/0:20,0:20:18.39:0,18,274	0/0:14,0:14:42.14:0,42,728	0/0:15,0:15:41.76:0,42,572	0/0:19,0:18:44.78:0,45,646	1/1:27,0:27:14.95:142,15,0	1/1:26,0:25:20.90:202,21,0	0/0:28,0:26:50.89:0,51,437	1/1:18,1:19:11.99:124,12,0	0/0:21,1:20:21.91:0,22,628	0/0:21,0:21:32.74:0,33,455	0/0:9,0:9:23.92:0,24,283	0/0:24,0:24:61.70:0,62,997	0/0:22,0:22:56.41:0,56,756	0/0:27,0:27:71.91:0,72,1056	1/1:17,2:18:53.75:503,54,0	0/0:18,0:17:45.92:0,46,405	0/0:20,0:19:33.57:0,34,400	0/0:8,0:8:20.17:0,20,159
chr10	17371917	.	GCC	G	2369.42	PASS	AB=0.668;AC=14;AF=0.250;AN=56;BaseQRankSum=-0.321;DP=468;FS=23.856;HRun=12;HaplotypeScore=70.1625;InbreedingCoeff=0.7180;MQ=73.67;MQ0=0;MQRankSum=0.039;QD=14.36;ReadPosRankSum=9.286;VQSLOD=-0.4013;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:42.53:0,43,506	0/0:3,0:3:5.97:0,6,50	0/0:22,0:21:3.31:0,3,281	0/0:20,0:17:15.89:0,16,124	0/0:8,0:8:9:0,9,83	1/1:7,14:22:35.69:336,36,0	1/1:5,19:24:51.08:518,51,0	0/0:10,0:16:16.11:0,16,72	0/0:5,0:14:9.01:0,9,84	0/0:6,0:10:5.84:0,6,45	0/0:9,0:9:8.91:0,9,103	0/0:19,0:19:30.41:0,30,268	0/0:26,0:27:53.98:0,54,577	0/0:8,0:9:17.96:0,18,148	1/1:7,11:18:23.49:294,23,0	1/1:4,21:25:57.05:579,57,0	0/0:23,0:23:53.91:0,54,537	1/1:5,22:28:56.81:557,57,0	0/1:9,1:16:6.63:7,0,95	0/0:9,0:21:11.35:0,11,77	0/1:7,1:16:8.64:9,0,75	0/0:10,0:10:18:0,18,186	0/0:9,0:14:18.19:0,18,203	0/0:18,0:19:36.05:0,36,423	1/1:8,7:16:26.74:256,27,0	0/0:10,0:10:11.97:0,12,116	0/0:16,0:17:29.92:0,30,269	0/0:4,0:4:9.01:0,9,93
chr10	17372744	.	G	GAATC	6786.11	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-11.954;DP=677;FS=2.508;HRun=0;HaplotypeScore=100.6375;InbreedingCoeff=0.9957;MQ=65.18;MQ0=0;MQRankSum=0.135;QD=41.38;ReadPosRankSum=2.508;VQSLOD=4.9567;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:57.19:0,57,920	0/0:10,0:10:24.08:0,24,392	0/0:16,0:14:15.05:0,15,235	0/0:18,0:17:33.08:0,33,498	0/0:32,0:32:57.18:0,57,878	1/1:8,20:29:51.18:1240,51,0	1/1:7,13:20:33.11:803,33,0	0/0:44,0:44:72.20:0,72,1127	0/0:24,0:24:33.10:0,33,512	0/0:20,0:20:54.18:0,54,880	0/0:19,0:19:39.13:0,39,637	0/0:25,0:25:54.18:0,54,867	0/0:25,0:25:57.19:0,57,924	0/0:25,0:25:54.18:0,54,876	1/1:8,20:29:51.17:1205,51,0	1/1:7,23:31:57.20:1387,57,0	0/0:22,0:22:48.16:0,48,784	1/1:9,25:35:60.21:1460,60,0	0/0:17,0:17:27.09:0,27,441	0/0:18,0:18:36.12:0,36,573	0/0:44,0:44:99:0,108,1753	0/0:18,0:18:39.11:0,39,591	0/0:19,0:19:45.14:0,45,710	0/0:29,0:29:63.22:0,63,1027	1/1:6,13:20:30.10:691,30,0	0/0:20,0:20:36.12:0,36,581	0/0:29,0:28:60.18:0,60,926	0/0:15,0:15:30.10:0,30,490
chr10	17372858	.	AAAAC	A	4867.05	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=13.338;DP=611;FS=8.271;HRun=0;HaplotypeScore=102.8747;InbreedingCoeff=0.9467;MQ=56.83;MQ0=4;MQRankSum=-3.431;QD=15.55;ReadPosRankSum=2.825;VQSLOD=3.9748;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:32.89:0,33,735	1/1:1,8:9:15.05:215,15,0	0/0:16,0:10:15.02:0,15,231	0/0:11,0:8:3.01:0,3,42	1/1:11,11:22:33.07:471,33,0	1/1:9,0:31:36.05:350,36,0	1/1:9,0:26:18.02:168,18,0	0/0:35,0:33:57.12:0,57,897	0/0:19,0:19:30.10:0,30,704	1/1:9,14:23:42.13:627,42,0	1/1:6,11:17:32.97:434,33,0	0/0:22,0:22:48.15:0,48,962	0/0:22,0:22:42.13:0,42,881	0/0:24,0:24:48.13:0,48,948	1/1:14,0:29:27.03:252,27,0	1/1:11,0:24:21.02:196,21,0	1/1:18,16:34:33.11:532,33,0	1/1:11,0:24:6.01:63,6,0	0/0:17,0:14:21.07:0,21,489	0/0:20,0:20:48.14:0,48,993	0/0:19,0:20:39.13:0,39,819	0/0:28,0:28:42.14:0,42,967	0/0:17,0:17:36.12:0,36,841	0/0:25,0:25:51.17:0,51,1181	1/1:11,0:17:25.10:209,25,0	1/1:4,16:20:45.13:691,45,0	1/1:15,18:33:33.11:516,33,0	1/1:0,4:4:9.03:145,9,0
chr10	17373120	.	GAA	G	2431.09	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=6.806;DP=456;FS=3.258;HRun=14;HaplotypeScore=71.8199;InbreedingCoeff=0.9580;MQ=67.31;MQ0=5;MQRankSum=-1.917;QD=10.57;ReadPosRankSum=5.848;VQSLOD=2.2964;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:25:63.20:0,63,863	1/1:0,6:7:20.77:178,21,0	0/0:17,0:10:21.45:0,21,183	0/0:24,0:15:24.95:0,25,221	1/1:4,10:16:8.61:175,9,0	1/1:3,0:23:27.41:119,27,0	1/1:7,0:18:19.14:83,19,0	0/0:25,0:27:55.64:0,56,678	0/0:8,0:10:24.06:0,24,304	1/1:2,11:13:26.97:246,27,0	1/1:1,9:11:23.70:202,24,0	0/0:16,0:16:39.13:0,39,533	0/0:5,0:5:14.88:0,15,177	0/0:19,0:18:39.84:0,40,467	1/1:1,0:19:38.41:167,38,0	1/1:0,0:13:13.68:60,14,0	1/1:4,31:35:56.50:570,56,0	1/1:7,0:26:32.84:143,33,0	0/0:22,0:22:45.62:0,46,617	0/0:9,0:10:26.50:0,26,302	0/0:7,0:9:21.02:0,21,257	0/0:10,0:11:20.54:0,21,242	0/0:8,0:9:23.55:0,24,285	0/0:20,0:20:40.67:0,41,516	1/1:1,0:10:10.95:48,11,0	1/1:2,12:14:39.01:352,39,0	1/1:5,16:19:8.78:253,9,0	1/1:1,2:3:8.04:62,8,0
chr10	17374041	.	C	CAT	4433.27	PASS	AB=0.539;AC=14;AF=0.259;AN=54;BaseQRankSum=-9.061;DP=437;FS=3.324;HRun=0;HaplotypeScore=51.6247;InbreedingCoeff=0.8098;MQ=71.79;MQ0=3;MQRankSum=0.245;QD=32.13;ReadPosRankSum=2.998;VQSLOD=6.7871;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:57.11:0,57,662	1/1:0,9:9:27.09:449,27,0	./.	0/0:11,0:11:10.73:0,11,89	1/1:4,2:14:15.01:133,15,0	0/0:17,0:17:42.06:0,42,486	0/0:8,0:8:17.86:0,18,213	0/0:34,0:34:81.21:0,81,981	0/0:14,0:15:38.96:0,39,468	1/1:3,12:15:36.12:599,36,0	1/1:2,10:12:21.07:346,21,0	0/0:16,0:16:42.13:0,42,530	0/0:15,0:15:35.93:0,36,417	0/0:10,0:10:18.06:0,18,227	0/0:14,0:14:39.11:0,39,478	0/0:16,0:16:45.12:0,45,542	1/1:1,19:21:10.32:710,10,0	0/0:16,0:16:39.12:0,39,492	0/0:29,0:29:72.23:0,72,907	0/0:13,0:13:36.12:0,36,454	0/0:10,0:10:27.05:0,27,312	0/0:3,0:3:6.02:0,6,76	0/0:11,0:11:21.07:0,21,265	0/0:9,0:9:18.06:0,18,227	0/0:17,0:17:39.12:0,39,492	1/1:2,18:19:51.17:848,51,0	0/1:2,13:15:1.69:512,0,2	0/1:5,26:32:15.47:837,0,15
chr10	17375853	.	CG	C	2255.17	PASS	AB=0.859;AC=26;AF=0.464;AN=56;BaseQRankSum=-1.876;DP=475;FS=11.112;HRun=11;HaplotypeScore=67.9385;InbreedingCoeff=0.5767;MQ=54.15;MQ0=10;MQRankSum=3.168;QD=8.64;ReadPosRankSum=4.908;VQSLOD=1.1599;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:29:14.70:0,15,123	1/1:0,5:5:8.99:74,9,0	0/1:9,1:5:11.89:12,0,76	0/1:9,0:3:3.77:4,0,6	0/1:8,13:19:5.04:170,0,5	0/0:11,0:11:5.99:0,6,50	0/0:15,0:23:17.25:0,17,94	1/1:11,7:19:14:104,14,0	0/1:18,2:20:13.48:13,0,257	1/1:5,11:17:31.98:252,32,0	1/1:6,9:14:8.90:63,9,0	0/0:21,1:23:14.09:0,14,264	0/0:16,0:16:17.39:0,17,112	0/0:8,0:14:0.89:0,1,2	0/0:9,0:14:2.96:0,3,19	0/0:9,0:13:8.67:0,9,48	1/1:6,18:25:50.84:386,51,0	0/0:9,0:18:2.84:0,3,14	1/1:6,7:11:23.91:191,24,0	1/1:5,11:17:34.95:270,35,0	1/1:12,21:34:49:381,49,0	0/0:1,0:5:2.84:0,3,14	0/0:8,0:13:14.47:0,14,116	0/0:10,0:19:11.67:0,12,79	0/0:11,0:12:5.96:0,6,45	1/1:7,13:19:23.93:196,24,0	1/1:7,16:26:40.49:307,40,0	1/1:2,6:8:2.97:25,3,0
chr10	17376296	.	C	CTT	3070.69	PASS	AB=0.861;AC=24;AF=0.429;AN=56;BaseQRankSum=-1.529;DP=571;FS=5.467;HRun=12;HaplotypeScore=90.9644;InbreedingCoeff=0.7505;MQ=59.30;MQ0=23;MQRankSum=-4.853;QD=11.25;ReadPosRankSum=-4.798;VQSLOD=1.3525;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:48,1:49:50.41:0,50,761	1/1:6,1:8:9.02:113,9,0	0/0:16,0:8:5.55:0,6,28	0/1:17,0:11:0.10:0,0,69	1/1:9,13:23:33.15:344,33,0	0/0:7,0:6:5.67:0,6,97	0/0:17,0:16:20.23:0,20,232	1/1:13,13:26:44.14:335,44,0	0/0:22,0:22:35.24:0,35,322	1/1:6,7:14:9.01:94,9,0	1/1:4,10:14:9.34:237,9,0	0/0:15,0:15:16.31:0,16,142	0/0:21,0:23:32.74:0,33,312	0/0:6,0:8:1.07:0,1,73	0/0:22,0:23:44.66:0,45,400	0/0:23,1:24:16.25:0,16,435	1/1:16,27:41:54.43:684,54,0	0/0:16,0:14:8.87:0,9,215	1/1:20,18:35:43.41:636,43,0	1/1:7,0:12:14.71:102,15,0	1/1:10,0:9:13.55:149,14,0	0/0:22,0:21:34.21:0,34,349	0/0:11,0:11:17.71:0,18,149	0/0:19,0:21:32.29:0,32,254	0/0:18,0:19:26.72:0,27,249	1/1:12,9:22:3.73:236,4,0	1/1:11,17:29:4.18:260,4,0	0/1:8,4:11:8.22:83,0,8
chr10	17376543	.	AT	A	2724.52	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=8.181;DP=514;FS=1.247;HRun=12;HaplotypeScore=61.3367;InbreedingCoeff=0.9662;MQ=73.98;MQ0=1;MQRankSum=-0.525;QD=17.69;ReadPosRankSum=1.394;VQSLOD=4.8641;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,1:32:46.55:0,47,703	1/1:0,7:7:14.93:116,15,0	0/0:27,0:16:31.68:0,32,221	0/0:31,0:18:12.48:0,12,135	1/1:2,16:18:44.78:344,45,0	0/0:7,0:8:11.86:0,12,106	0/0:30,0:30:81.13:0,81,808	0/0:25,1:26:51.86:0,52,685	0/0:15,0:15:41.89:0,42,398	1/1:1,13:14:41.84:325,42,0	1/1:4,19:23:53.41:406,53,0	0/0:19,2:22:30.76:0,31,473	0/0:17,0:17:42.08:0,42,423	0/0:11,1:12:9.84:0,10,277	0/0:12,0:12:27.05:0,27,274	0/0:4,0:4:9.01:0,9,85	1/1:0,36:36:89.66:696,90,0	0/0:17,0:18:37.49:0,37,392	0/0:17,0:17:45.08:0,45,447	0/0:17,0:17:48.10:0,48,487	0/0:12,0:12:33.07:0,33,335	0/0:11,0:11:24.04:0,24,237	0/0:9,0:9:15.03:0,15,152	0/0:18,0:18:48.10:0,48,487	0/0:21,0:21:45.09:0,45,456	1/1:2,13:15:38.85:302,39,0	1/1:1,25:26:56.62:441,57,0	1/1:1,14:15:38.83:302,39,0
chr10	17377079	.	TGC	T	2906.98	PASS	AB=0.926;AC=22;AF=0.407;AN=54;BaseQRankSum=4.143;DP=590;FS=6.972;HRun=0;HaplotypeScore=94.9953;InbreedingCoeff=0.4767;MQ=62.80;MQ0=3;MQRankSum=-0.636;QD=10.53;ReadPosRankSum=2.474;VQSLOD=2.9748;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:72.04:0,72,968	1/1:11,0:11:0.17:37,0,0	./.	0/0:10,0:7:3:0,3,26	0/1:14,0:14:29.05:29,0,74	1/1:1,21:22:33.09:429,33,0	1/1:6,17:23:33.09:428,33,0	0/0:22,0:22:40.36:0,40,333	0/0:18,0:18:44.10:0,44,618	1/1:25,0:25:8.59:252,9,0	1/1:9,0:9:1.87:24,2,0	0/0:32,0:32:74.13:0,74,1091	0/0:14,0:14:15.84:0,16,366	0/0:15,0:15:32.78:0,33,465	0/1:4,15:19:1.04:222,0,1	1/1:5,13:18:27:333,27,0	0/1:36,0:35:25.25:111,0,25	1/1:3,33:36:57.19:769,57,0	0/0:13,0:13:12.64:0,13,271	0/0:19,0:19:19.05:0,19,644	0/0:43,0:43:56.40:0,56,939	0/0:24,0:23:48.18:0,48,684	0/0:27,0:27:65.77:0,66,857	0/0:34,0:34:81.10:0,81,1192	1/1:3,13:16:24.05:288,24,0	0/1:24,0:23:25.97:83,0,26	0/1:15,0:14:30.89:52,0,31	0/1:8,0:8:7.15:36,0,7
chr10	17377084	.	G	GCA	2363.74	PASS	AB=0.653;AC=11;AF=0.204;AN=54;BaseQRankSum=4.223;DP=592;FS=3.091;HRun=0;HaplotypeScore=106.3026;InbreedingCoeff=0.4776;MQ=61.93;MQ0=4;MQRankSum=0.882;QD=15.86;ReadPosRankSum=0.584;VQSLOD=3.5877;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:87.27:0,87,1241	1/1:2,8:10:14.42:228,14,0	./.	0/0:9,0:6:2.96:0,3,19	0/1:7,9:16:58.17:117,0,58	0/0:21,0:22:31.33:0,31,157	0/0:21,0:22:37.45:0,37,202	0/0:20,0:19:45.55:0,46,600	0/0:18,0:18:48.06:0,48,655	0/1:19,5:24:12.40:308,0,12	0/1:4,10:15:2.83:174,0,3	0/0:35,0:35:87.25:0,87,1268	0/0:15,0:15:42.04:0,42,527	0/0:13,0:13:33.09:0,33,469	0/0:18,0:18:23.23:0,23,134	0/0:13,0:15:25.33:0,25,125	1/1:18,19:36:51.51:996,52,0	0/0:37,0:37:57.59:0,58,301	0/0:13,0:13:13.13:0,13,437	0/0:21,0:21:47.84:0,48,687	0/0:46,0:46:99:0,108,1350	0/0:24,0:23:57.09:0,57,776	0/0:26,0:26:72.04:0,72,920	0/0:31,0:31:81.27:0,81,1219	0/0:17,0:19:26.87:0,27,166	1/1:8,16:24:22.50:458,22,0	0/1:5,7:12:31.22:78,0,31	0/1:3,5:9:6.71:168,0,7
chr10	17377086	.	GCA	G	757.88	PASS	AB=0.964;AC=11;AF=0.204;AN=54;BaseQRankSum=5.457;DP=616;FS=5.113;HRun=0;HaplotypeScore=110.3331;InbreedingCoeff=0.1597;MQ=61.42;MQ0=5;MQRankSum=0.968;QD=3.46;ReadPosRankSum=2.942;VQSLOD=2.2254;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,2:33:2.94:0,3,623	0/0:10,0:10:15:0,15,131	./.	0/0:10,0:6:2.97:0,3,20	0/0:16,0:16:21.04:0,21,257	1/1:24,0:23:10.98:151,11,0	0/1:22,0:22:31.97:135,0,32	0/0:20,0:20:4.31:0,4,131	0/0:19,0:19:42.09:0,42,558	0/0:25,0:25:36.01:0,36,338	0/0:17,0:17:17.98:0,18,151	0/0:31,4:35:28.80:0,29,813	0/1:13,1:14:5.33:5,0,331	0/0:13,0:13:30.08:0,30,426	0/1:19,0:19:70.51:71,0,91	1/1:16,0:16:29.08:166,29,0	0/0:40,0:39:80.95:0,81,714	0/1:38,0:38:11.30:236,0,11	0/0:14,0:14:15.02:0,15,189	0/1:16,4:20:17.47:17,0,578	0/1:45,0:46:7.30:7,0,601	0/0:25,0:24:20.39:0,20,513	0/0:27,0:27:31.25:0,31,727	0/0:32,0:32:63.15:0,63,913	0/1:20,0:20:65.33:120,0,65	0/0:30,0:29:55.46:0,55,502	0/0:14,0:13:14.91:0,15,169	0/0:8,0:8:14.96:0,15,125
chr10	17377652	.	T	TGGTTTTGCTACATAAGTTAC	29783.22	PASS	AB=0.750;AC=53;AF=0.981;AN=54;BaseQRankSum=-0.401;DP=155;FS=15.769;HRun=0;HaplotypeScore=116.6879;InbreedingCoeff=-0.0427;MQ=59.32;MQ0=0;MQRankSum=-1.686;QD=192.15;ReadPosRankSum=1.640;VQSLOD=4.1605;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,0:8:21.07:1296,21,0	1/1:2,0:2:6.02:472,6,0	1/1:0,1:3:9.03:736,9,0	0/1:2,0:3:30.14:316,0,30	1/1:6,0:6:18.06:815,18,0	1/1:8,0:8:24.08:1676,24,0	1/1:7,0:7:21.05:1051,21,0	1/1:14,0:14:42.14:2675,42,0	1/1:5,0:5:15.05:709,15,0	1/1:7,0:7:21.07:1490,21,0	1/1:5,0:5:15.05:1055,15,0	1/1:3,0:3:9.03:751,9,0	1/1:3,0:3:9.03:589,9,0	1/1:12,0:12:36.12:3025,36,0	1/1:10,0:10:30.10:2425,30,0	1/1:6,0:6:18.06:1200,18,0	1/1:5,0:5:12.04:844,12,0	1/1:4,0:4:12.01:680,12,0	1/1:3,0:3:8.99:219,9,0	1/1:5,0:5:15.05:762,15,0	1/1:4,0:4:12.04:521,12,0	1/1:5,0:5:15.05:1029,15,0	1/1:6,0:6:15.05:1056,15,0	1/1:4,0:4:9.03:545,9,0	1/1:5,0:5:15.05:1094,15,0	1/1:7,0:7:21.07:1488,21,0	1/1:5,0:5:15.05:1265,15,0	./.
chr10	17378599	.	G	GTTTATCTCTAACGGTTTT	19745.62	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=4.938;DP=561;FS=1.827;HRun=0;HaplotypeScore=250.0534;InbreedingCoeff=0.9177;MQ=70.87;MQ0=0;MQRankSum=-14.575;QD=140.04;ReadPosRankSum=-0.682;VQSLOD=4.6530;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,117,4990	0/0:9,0:9:23.24:0,23,1228	0/0:17,0:16:19.29:0,19,830	0/1:10,0:9:5.74:6,0,161	0/0:24,0:25:75.25:0,75,3489	1/1:12,5:17:45.15:3117,45,0	1/1:24,3:32:81.28:4784,81,0	0/0:34,0:34:96.30:0,96,3910	0/0:10,0:10:24.08:0,24,1171	0/0:17,0:17:45.08:0,45,1830	0/0:15,0:15:45.11:0,45,2152	0/0:27,0:27:78.25:0,78,3589	0/0:25,0:25:69.21:0,69,3265	0/0:20,0:20:60.18:0,60,2764	1/1:12,6:22:48.16:3038,48,0	1/1:13,3:19:45.15:2843,45,0	0/0:27,0:27:75.21:0,75,3230	1/1:14,2:17:36.12:2474,36,0	0/0:25,0:25:66.19:0,66,2914	0/0:14,0:14:39.13:0,39,1933	0/0:19,0:19:44.97:0,45,1982	0/0:14,0:14:39.13:0,39,1836	0/0:15,0:15:36.12:0,36,1611	0/0:16,0:16:42.04:0,42,1653	1/1:12,6:23:54.19:3485,54,0	0/0:20,0:20:54.16:0,54,2317	0/0:19,0:19:57.17:0,57,2402	0/0:9,0:9:27.09:0,27,1325
chr10	17380719	.	CACCA	C	6839.59	PASS	AB=0.993;AC=39;AF=0.696;AN=56;BaseQRankSum=0.426;DP=677;FS=38.509;HRun=0;HaplotypeScore=171.3417;InbreedingCoeff=0.2185;MQ=56.61;MQ0=17;MQRankSum=-4.242;QD=11.69;ReadPosRankSum=-1.455;VQSLOD=2.3552;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:36,1:39:51.81:52,0,469	1/1:7,0:7:11.27:121,11,0	0/0:44,0:21:13.32:0,13,224	0/1:31,0:18:13.51:14,0,115	1/1:36,0:35:28.67:332,29,0	1/1:10,15:23:46.65:559,47,0	1/1:9,24:34:52.60:559,53,0	0/1:21,0:21:21.51:101,0,22	0/0:5,0:5:4.10:0,4,43	1/1:28,0:25:29.88:376,30,0	1/1:12,0:11:26.90:263,27,0	0/1:29,0:29:3.06:3,0,220	0/1:14,0:14:43.08:71,0,43	0/0:14,0:14:20.34:0,20,155	1/1:11,31:43:97.64:1087,98,0	1/1:9,22:32:74.63:830,75,0	1/1:23,0:22:44.50:403,44,0	1/1:11,3:14:27.02:241,27,0	1/1:15,1:14:12.75:65,13,0	0/1:23,1:24:50.91:51,0,55	1/1:15,0:14:2:31,2,0	0/1:13,0:26:3.34:3,0,202	0/1:16,0:16:24.33:24,0,74	0/1:19,0:20:12.59:13,0,201	1/1:14,17:31:68.47:700,68,0	1/1:30,0:26:53.95:643,54,0	0/0:27,0:26:3.04:0,3,22	1/1:17,0:17:24.44:299,24,0
chr10	17382179	.	TG	T	7258.90	PASS	AB=0.950;AC=52;AF=0.929;AN=56;BaseQRankSum=3.937;DP=833;FS=8.871;HRun=1;HaplotypeScore=151.2036;InbreedingCoeff=-0.0903;MQ=68.58;MQ0=0;MQRankSum=-3.503;QD=8.71;ReadPosRankSum=9.847;VQSLOD=1.1457;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:50,0:50:92.31:470,92,0	1/1:16,0:16:28.09:164,28,0	0/1:24,1:24:71.84:72,0,159	0/1:24,4:26:73.85:143,0,74	1/1:30,0:30:77.05:352,77,0	1/1:25,0:25:62.46:266,62,0	1/1:31,0:31:0.57:231,1,0	0/1:26,1:27:48.79:119,0,49	1/1:26,0:26:68.41:302,68,0	1/1:26,0:26:65.52:256,66,0	1/1:13,0:13:35.67:159,36,0	1/1:42,0:42:99:463,103,0	1/1:26,0:26:68.58:303,69,0	1/1:25,0:25:4.54:157,5,0	1/1:45,0:45:82.82:436,83,0	0/1:39,0:39:2.98:263,0,3	1/1:35,0:35:7.35:276,7,0	1/1:22,0:22:31.30:186,31,0	1/1:27,0:27:22.40:168,22,0	1/1:22,0:22:57.94:270,58,0	1/1:57,0:57:78.62:464,79,0	1/1:32,0:32:65.63:341,66,0	1/1:22,0:22:11.85:157,12,0	1/1:35,0:35:63.64:346,64,0	1/1:33,0:33:49.88:267,50,0	1/1:23,0:23:55.11:204,55,0	1/1:34,0:34:47.47:282,47,0	1/1:17,0:17:17.03:141,17,0
chr10	17383714	.	TTTCC	T	2965.38	PASS	AB=0.963;AC=22;AF=0.407;AN=54;BaseQRankSum=0.246;DP=465;FS=10.330;HRun=0;HaplotypeScore=82.0708;InbreedingCoeff=0.4198;MQ=57.57;MQ0=24;MQRankSum=-2.623;QD=13.67;ReadPosRankSum=5.035;VQSLOD=2.1466;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:73.26:0,73,866	./.	0/0:62,0:9:24.05:0,24,321	0/0:64,0:15:29.10:0,29,332	0/0:5,0:5:14.66:0,15,139	1/1:3,10:13:20.98:345,21,0	1/1:2,19:21:30.09:460,30,0	0/1:28,0:26:92.01:351,0,92	0/0:5,0:4:11.06:0,11,108	0/1:15,0:14:14.90:15,0,118	1/1:4,0:5:11.48:75,11,0	0/0:11,0:11:23.88:0,24,265	0/0:11,0:11:32.67:0,33,398	0/0:15,0:14:36.12:0,36,685	1/1:0,16:15:21.07:359,21,0	1/1:0,9:9:9.03:157,9,0	0/1:22,0:21:52.88:53,0,54	1/1:6,25:31:25.16:759,25,0	0/1:5,2:7:14.30:99,0,14	1/1:8,0:8:2.95:112,3,0	0/1:17,0:17:32.37:45,0,32	0/0:5,0:5:5.75:0,6,57	0/0:7,0:7:9.27:0,9,77	0/0:20,0:20:35.26:0,35,351	1/1:4,5:9:20.49:300,20,0	0/0:10,0:10:2.89:0,3,182	0/1:16,0:16:25.67:26,0,106	0/0:5,0:5:2.07:0,2,39
chr10	17383715	.	TTCC	T	2483.10	PASS	AB=0.948;AC=27;AF=0.500;AN=54;BaseQRankSum=1.067;DP=459;FS=6.435;HRun=0;HaplotypeScore=76.6787;InbreedingCoeff=0.5797;MQ=56.31;MQ0=24;MQRankSum=-1.257;QD=10.70;ReadPosRankSum=3.445;VQSLOD=2.3013;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:61.23:0,61,502	./.	0/0:62,0:9:23.40:0,23,265	0/0:62,0:14:18.39:0,18,239	0/0:5,0:5:11.47:0,11,68	1/1:10,0:11:21.02:205,21,0	1/1:21,0:21:29.79:281,30,0	1/1:5,22:25:7.79:598,8,0	0/1:4,0:4:2.58:3,0,45	0/0:15,0:14:4.32:0,4,83	1/1:5,0:5:7.36:37,7,0	0/0:9,0:10:15.28:0,15,125	0/0:10,0:11:11.32:0,11,238	0/0:15,0:14:35.93:0,36,543	1/1:16,0:15:21.03:206,21,0	1/1:9,0:9:9.02:92,9,0	0/1:22,0:22:24.83:25,0,48	1/1:30,0:30:50.10:460,50,0	1/1:4,2:6:17.92:191,18,0	1/1:2,6:8:19.63:202,20,0	1/1:4,13:17:2.55:174,3,0	0/0:5,0:5:5.64:0,6,40	0/0:7,0:7:5.06:0,5,27	0/1:18,0:19:0.70:1,0,134	1/1:7,1:8:23.13:190,23,0	0/1:11,0:11:5.03:5,0,89	0/1:16,0:16:6.07:6,0,49	0/0:6,0:6:5.91:0,6,30
chr10	17384817	.	T	TTCC	10398.39	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-13.240;DP=607;FS=2.011;HRun=0;HaplotypeScore=78.3531;InbreedingCoeff=0.9893;MQ=68.65;MQ0=1;MQRankSum=-0.614;QD=41.26;ReadPosRankSum=5.552;VQSLOD=5.7284;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:87.18:0,87,1225	1/1:0,8:8:24.04:470,24,0	0/0:24,0:20:35.25:0,35,534	0/0:35,0:30:62.12:0,62,825	1/1:1,8:10:26.86:345,27,0	1/1:0,15:15:36.12:771,36,0	1/1:3,21:26:8.66:607,9,0	0/0:27,0:27:69.20:0,69,973	0/0:21,0:21:54.16:0,54,788	1/1:1,11:14:36.11:729,36,0	1/1:0,7:8:17.90:265,18,0	0/0:48,0:48:99:0,132,1948	0/0:15,0:15:39.13:0,39,600	0/0:21,0:21:57.19:0,57,878	1/1:1,17:18:42.14:901,42,0	1/1:1,19:20:30.10:643,30,0	1/1:5,29:36:60.21:1287,60,0	1/1:2,15:17:28.25:823,28,0	0/0:17,0:17:44.36:0,44,654	0/0:19,0:19:48.10:0,48,655	0/0:45,0:45:99:0,129,1920	0/0:14,0:14:38.89:0,39,469	0/0:10,0:10:26.99:0,27,332	0/0:28,0:28:75.24:0,75,1133	1/1:2,15:17:30.05:598,30,0	1/1:5,17:22:51.16:1010,51,0	1/1:1,24:28:63.16:1305,63,0	1/1:0,13:13:30.10:644,30,0
chr10	17389110	.	GAGCCTTCTTCA	G	6789.64	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=12.252;DP=528;FS=18.019;HRun=0;HaplotypeScore=172.9877;InbreedingCoeff=0.9853;MQ=91.01;MQ0=0;MQRankSum=-11.906;QD=67.22;ReadPosRankSum=1.635;VQSLOD=3.6502;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,114,6352	1/1:2,7:9:18.06:642,18,0	0/0:26,0:26:78.27:0,78,3589	0/0:19,0:20:56.88:0,57,2553	1/1:3,16:19:36.12:1192,36,0	0/0:15,0:15:45.15:0,45,2568	0/0:12,0:12:36.12:0,36,1887	0/0:17,0:17:51.16:0,51,2606	0/0:13,0:13:36.12:0,36,2078	1/1:2,5:7:15.05:524,15,0	1/1:1,11:12:27.09:903,27,0	0/0:19,0:19:57.20:0,57,3223	0/0:17,0:17:51.18:0,51,2859	0/0:22,0:22:66.23:0,66,3646	0/0:26,0:26:75.26:0,75,4102	0/0:14,0:14:42.13:0,42,2145	1/1:6,18:23:33.11:1174,33,0	0/0:35,0:35:99:0,102,5431	0/0:21,0:21:63.22:0,63,3244	0/0:13,0:13:39.13:0,39,2097	0/0:40,0:40:99:0,114,6400	0/0:19,0:19:57.20:0,57,3074	0/0:12,0:12:36.12:0,36,2076	0/0:38,0:37:99:0,108,5950	0/0:10,0:10:27.09:0,27,1546	1/1:0,8:8:24.08:856,24,0	1/1:3,12:15:33.11:1177,33,0	1/1:1,6:7:9.03:321,9,0
chr10	17389395	.	G	GTTGTT	2595.77	PASS	AB=0.935;AC=26;AF=0.464;AN=56;BaseQRankSum=1.299;DP=617;FS=22.947;HRun=0;HaplotypeScore=126.0281;InbreedingCoeff=0.3988;MQ=64.19;MQ0=5;MQRankSum=-0.453;QD=7.42;ReadPosRankSum=-2.524;VQSLOD=0.7272;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:31:41.23:0,41,705	0/1:10,0:10:10.68:17,0,11	0/1:19,0:10:15.92:16,0,61	0/0:16,0:12:11.10:0,11,135	1/1:19,0:19:16.16:199,16,0	1/1:5,4:17:24:303,24,0	1/1:3,22:32:12:176,12,0	0/1:35,0:30:99:111,0,156	0/0:18,0:18:23.05:0,23,264	1/1:20,0:21:7.03:189,7,0	0/1:19,0:19:27.84:239,0,28	0/0:37,0:39:41.18:0,41,705	0/0:18,0:17:13.30:0,13,328	0/0:13,0:15:22.88:0,23,180	1/1:1,17:24:9.03:247,9,0	0/1:3,16:24:7.04:204,0,7	0/0:31,0:31:25.21:0,25,93	1/1:3,15:26:9.91:202,10,0	1/1:21,0:17:14.75:98,15,0	1/1:16,0:15:17.53:114,18,0	0/1:16,0:16:55.15:85,0,55	0/0:16,0:19:32.91:0,33,437	0/0:16,0:16:31.24:0,31,429	0/0:38,0:39:87.10:0,87,1217	1/1:17,0:17:28.49:452,28,0	0/1:16,0:17:42.95:136,0,43	0/0:21,0:22:7.29:0,7,36	0/1:14,0:14:7.81:8,0,50
chr10	17389397	.	T	TG	2690.09	PASS	AB=0.893;AC=22;AF=0.393;AN=56;BaseQRankSum=-3.164;DP=614;FS=2.891;HRun=0;HaplotypeScore=83.8012;InbreedingCoeff=0.4449;MQ=62.77;MQ0=6;MQRankSum=4.094;QD=8.49;ReadPosRankSum=4.107;VQSLOD=3.6625;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:76.65:0,77,726	1/1:0,11:11:23.98:246,24,0	0/1:20,0:8:5.96:6,0,78	0/0:13,0:9:11.77:0,12,136	1/1:5,15:21:26.65:279,27,0	1/1:18,0:17:17.83:136,18,0	0/1:32,0:31:15.29:37,0,15	0/0:36,0:31:57.68:0,58,418	0/0:18,0:18:50.82:0,51,477	1/1:3,18:21:26.92:382,27,0	1/1:2,16:19:14.62:357,15,0	0/0:38,0:38:99:0,105,919	0/0:19,0:18:44.22:0,44,387	0/0:16,0:16:33.30:0,33,285	0/1:25,0:25:5.20:40,0,5	0/1:22,0:22:44.56:45,0,62	0/1:9,22:31:5.57:365,0,6	0/1:21,1:22:38.92:39,0,39	0/0:19,0:15:36.40:0,36,252	0/0:16,0:15:30.62:0,31,196	0/0:15,0:15:32.56:0,33,210	0/0:19,0:19:46.11:0,46,412	0/0:16,0:16:43.31:0,43,468	0/0:41,0:39:99:0,113,1132	0/1:17,0:17:99:117,0,102	1/1:6,15:21:37.39:352,37,0	1/1:4,18:22:17.82:297,18,0	0/1:5,9:13:19.07:192,0,19
chr10	17389915	.	GTTTTTTGTTTGT	G	8114.02	PASS	AB=0.541;AC=15;AF=0.268;AN=56;BaseQRankSum=12.304;DP=652;FS=7.728;HRun=0;HaplotypeScore=216.4174;InbreedingCoeff=0.8743;MQ=60.15;MQ0=1;MQRankSum=-8.800;QD=46.37;ReadPosRankSum=2.632;VQSLOD=3.7316;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:63.20:0,63,3134	1/1:1,7:8:18.06:556,18,0	0/0:22,0:17:33.49:0,33,552	0/0:26,0:21:38.62:0,39,916	1/1:3,18:21:42.05:1000,42,0	0/0:19,0:19:45.13:0,45,1881	0/0:24,0:23:57.18:0,57,2276	0/0:19,0:17:30.06:0,30,420	0/0:30,0:30:66.17:0,66,3237	1/1:2,23:24:57.14:1594,57,0	1/1:1,14:15:26.92:771,27,0	0/0:34,0:34:87.28:0,87,4383	0/0:23,0:23:66.17:0,66,2514	0/0:18,0:18:48.14:0,48,2213	0/0:33,0:33:87.26:0,87,3828	0/0:22,0:22:57.20:0,57,2807	0/1:5,28:33:38.86:808,0,39	0/0:35,0:35:96.23:0,96,4543	0/0:19,0:19:36.03:0,36,663	0/0:23,0:23:60.13:0,60,1322	0/0:22,0:22:45.13:0,45,957	0/0:23,0:23:66.14:0,66,2723	0/0:20,0:20:48.14:0,48,2116	0/0:25,0:25:66.21:0,66,3318	0/0:17,0:17:48.03:0,48,1692	1/1:4,19:23:3.19:1370,3,0	1/1:7,31:38:41.39:1401,41,0	1/1:1,11:12:18.06:615,18,0
chr10	17389930	.	TTTTG	T	3453.84	PASS	AB=1.000;AC=20;AF=0.357;AN=56;BaseQRankSum=14.485;DP=651;FS=3.560;HRun=0;HaplotypeScore=135.0921;InbreedingCoeff=0.5262;MQ=57.64;MQ0=8;MQRankSum=-7.505;QD=12.47;ReadPosRankSum=2.935;VQSLOD=3.4272;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:84.11:0,84,1612	0/1:7,0:7:9.75:110,0,10	0/1:25,0:17:5.42:5,0,179	0/0:22,0:16:17.69:0,18,230	0/1:20,0:19:40.62:149,0,41	0/0:17,0:17:33.11:0,33,750	0/0:23,0:22:45.11:0,45,897	1/1:9,11:18:27.02:310,27,0	0/0:28,0:28:68.36:0,68,1461	0/1:28,0:27:99:277,0,187	0/1:14,0:14:12.75:154,0,13	0/0:37,0:37:96.31:0,96,2234	0/0:25,0:25:51.16:0,51,1135	0/0:21,0:21:45.15:0,45,1036	0/0:32,0:32:72.23:0,72,1676	0/0:20,0:20:48.14:0,48,1093	0/1:34,0:34:99:140,0,177	0/0:37,0:37:88.68:0,89,1763	1/1:9,8:15:24.08:380,24,0	1/1:8,14:22:47.92:712,48,0	1/1:6,18:24:33.11:542,33,0	0/0:25,0:25:54.19:0,54,1284	0/0:17,0:17:38.60:0,39,775	0/0:23,0:23:63.20:0,63,1394	0/0:16,0:16:24.08:0,24,581	1/1:21,0:21:2.57:235,3,0	1/1:31,0:30:32.79:284,33,0	1/1:13,0:12:17.99:156,18,0
chr10	17390196	.	TCACACA	T	1722.08	PASS	AB=0.655;AC=16;AF=0.296;AN=54;BaseQRankSum=4.743;DP=687;FS=0.624;HRun=0;HaplotypeScore=181.9646;InbreedingCoeff=0.5045;MQ=63.51;MQ0=3;MQRankSum=-6.597;QD=6.60;ReadPosRankSum=-2.318;VQSLOD=2.4809;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,1:37:49.20:0,49,1249	0/0:4,0:7:14.94:0,15,153	./.	0/0:36,0:19:3.01:0,3,41	0/0:5,0:12:10.48:0,10,150	1/1:10,9:19:6.02:123,6,0	1/1:14,14:29:6.98:256,7,0	0/0:16,0:32:18.33:0,18,128	0/1:11,3:24:16.89:136,0,17	0/0:13,0:18:30.28:0,30,326	0/0:5,0:7:5.98:0,6,76	0/0:35,0:40:75.04:0,75,1809	0/0:33,0:33:63.12:0,63,1558	0/0:29,0:30:54.16:0,54,1425	0/1:12,16:28:5.86:290,0,6	1/1:9,22:32:3.45:410,3,0	0/0:8,0:17:29.03:0,29,317	0/1:19,15:36:9.64:364,0,10	0/1:8,0:17:30.36:30,0,38	1/1:6,0:22:20.60:130,21,0	1/1:15,0:35:8.52:49,9,0	0/0:13,0:14:23.82:0,24,587	0/0:9,0:9:9.03:0,9,234	0/0:47,0:56:93.25:0,93,2199	1/1:5,11:18:6.02:103,6,0	0/0:11,0:19:9.27:0,9,248	0/0:3,0:12:21.07:0,21,268	0/0:2,0:16:12.61:0,13,187
chr10	17390700	.	CATGT	C	6960.69	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=15.565;DP=750;FS=4.718;HRun=0;HaplotypeScore=124.3353;InbreedingCoeff=0.9819;MQ=64.35;MQ0=1;MQRankSum=-0.290;QD=33.63;ReadPosRankSum=3.981;VQSLOD=4.7123;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:91.86:0,92,2038	1/1:2,10:12:24.08:405,24,0	0/0:28,0:20:38.93:0,39,610	0/0:18,0:14:24.06:0,24,477	1/1:6,18:24:35.93:547,36,0	0/0:27,0:27:72.23:0,72,1741	0/0:18,0:18:45.14:0,45,1061	0/0:39,0:38:84.25:0,84,1811	0/0:29,0:29:81.25:0,81,1893	1/1:7,34:41:99:1604,102,0	1/1:4,9:13:17.93:304,18,0	0/0:49,0:49:99:0,132,3064	0/0:19,0:19:51.13:0,51,1074	0/0:28,0:28:81.26:0,81,1910	0/0:34,0:34:87.28:0,87,2089	0/0:23,1:24:6.53:0,7,1065	1/1:3,27:30:69.24:1164,69,0	0/0:21,0:21:51.18:0,51,1246	0/0:14,0:13:39.10:0,39,823	0/0:42,0:42:99:0,105,2301	0/0:27,0:27:66.21:0,66,1588	0/0:21,0:21:51.09:0,51,990	0/0:16,0:16:36.12:0,36,853	0/0:15,0:15:30.09:0,30,695	0/0:30,0:30:78.21:0,78,1713	1/1:6,37:43:99:1772,114,0	1/1:5,22:27:39.13:659,39,0	1/1:7,10:17:30.10:506,30,0
chr10	17391605	.	GC	G	4357.09	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=9.351;DP=584;FS=1.972;HRun=10;HaplotypeScore=65.1626;InbreedingCoeff=0.9771;MQ=78.93;MQ0=1;MQRankSum=-0.749;QD=20.27;ReadPosRankSum=2.570;VQSLOD=5.9269;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:42:99:0,114,1228	1/1:1,9:10:20.74:182,21,0	0/0:27,0:22:22.80:0,23,209	0/0:16,0:15:11.05:0,11,71	1/1:1,13:14:38.94:331,39,0	0/0:25,0:27:68.98:0,69,719	0/0:27,1:28:40.13:0,40,671	1/1:5,8:13:20.98:182,21,0	0/0:20,1:21:22.03:0,22,443	1/1:1,14:16:41.02:344,41,0	1/1:2,9:11:29.08:258,29,0	0/0:38,0:38:99:0,111,1159	0/0:23,2:25:8.05:0,8,535	0/0:16,1:17:25.09:0,25,505	0/0:20,0:20:54.15:0,54,597	0/0:21,1:22:37.11:0,37,630	1/1:4,28:32:61.37:634,61,0	0/0:23,0:23:59.90:0,60,603	1/1:2,18:21:52.76:445,53,0	1/1:1,19:20:50.81:430,51,0	1/1:3,20:23:44.98:391,45,0	0/0:15,0:15:36.08:0,36,389	0/0:9,0:9:27.03:0,27,274	0/0:16,0:16:44.71:0,45,474	0/0:22,1:23:19.09:0,19,400	1/1:4,20:24:32.80:512,33,0	1/1:2,24:26:62.98:545,63,0	1/1:0,5:5:12:104,12,0
chr10	17391983	.	CGT	C	2420.94	PASS	AB=0.851;AC=19;AF=0.339;AN=56;BaseQRankSum=4.915;DP=717;FS=0.000;HRun=0;HaplotypeScore=118.3045;InbreedingCoeff=0.4925;MQ=56.29;MQ0=9;MQRankSum=4.040;QD=10.00;ReadPosRankSum=3.873;VQSLOD=3.4557;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:43:23.60:0,24,904	0/1:5,2:7:37.44:60,0,37	0/1:34,0:17:24.21:24,0,40	0/0:40,0:23:17.73:0,18,138	1/1:7,6:13:12.03:138,12,0	0/0:17,0:21:5.66:0,6,33	0/0:27,0:29:0.88:0,1,2	0/0:20,0:26:43.17:0,43,427	0/0:23,0:23:45.15:0,45,680	1/1:11,15:26:42.81:414,43,0	1/1:4,10:16:29.75:304,30,0	0/0:37,3:42:1.15:0,1,1004	0/1:16,4:20:23.79:24,0,553	0/1:21,7:28:89.82:90,0,501	0/0:23,0:29:4.97:0,5,51	0/0:28,0:28:11.93:0,12,106	1/1:7,22:32:65.68:697,66,0	0/0:18,0:23:17.57:0,18,154	0/0:14,0:21:33:0,33,323	0/0:6,0:23:25.21:0,25,217	0/0:29,0:50:42.23:0,42,387	0/1:18,4:22:32.87:33,0,353	0/0:17,0:16:27.09:0,27,417	0/0:32,3:35:43.77:0,44,1094	0/0:19,0:17:5.98:0,6,49	1/1:6,13:19:35.93:402,36,0	1/1:6,10:16:27.08:310,27,0	1/1:4,3:8:11.87:117,12,0
chr10	17393252	.	GGGCT	G	6933.71	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=12.276;DP=675;FS=0.369;HRun=0;HaplotypeScore=145.1214;InbreedingCoeff=0.9995;MQ=82.12;MQ0=4;MQRankSum=-11.560;QD=45.92;ReadPosRankSum=3.214;VQSLOD=5.6285;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,129,3421	1/1:0,11:11:33.11:629,33,0	0/0:17,0:17:39.09:0,39,926	0/0:22,0:22:59.41:0,59,1363	1/1:3,22:25:51.17:986,51,0	0/0:18,0:18:54.15:0,54,1340	0/0:30,0:30:90.29:0,90,2369	0/0:26,0:26:74.74:0,75,1928	0/0:23,0:23:69.24:0,69,1827	1/1:2,17:19:54.19:1029,54,0	1/1:1,11:12:27.09:523,27,0	0/0:36,0:36:99:0,105,2873	0/0:29,0:29:87.30:0,87,2341	0/0:36,0:36:99:0,108,2796	0/0:32,0:32:93.32:0,93,2547	0/0:33,0:33:90.31:0,90,2443	1/1:4,23:27:60.21:1163,60,0	0/0:11,0:11:33.11:0,33,904	0/0:24,0:24:66.23:0,66,1764	0/0:18,0:18:54.19:0,54,1462	0/0:53,0:53:99:0,157,4256	0/0:12,0:12:30.10:0,30,780	0/0:17,0:17:45.15:0,45,1232	0/0:27,0:27:81.23:0,81,2110	0/0:16,0:16:45.15:0,45,1232	1/1:1,22:23:66.23:1267,66,0	1/1:2,17:18:42.14:814,42,0	1/1:4,11:11:27.09:523,27,0
chr10	17395446	.	CATTTCTCTGTGT	C	4196.83	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=8.116;DP=364;FS=11.928;HRun=0;HaplotypeScore=123.3950;InbreedingCoeff=0.9045;MQ=71.32;MQ0=1;MQRankSum=-9.241;QD=54.50;ReadPosRankSum=7.211;VQSLOD=2.1604;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:96.33:0,96,5475	0/0:5,0:5:9.92:0,10,457	0/0:21,0:21:54.18:0,54,2394	0/0:26,0:21:24.16:0,24,1770	0/0:9,0:9:18.06:0,18,882	1/1:2,5:7:9.03:337,9,0	1/1:3,11:14:27.09:1009,27,0	0/0:8,0:8:24.08:0,24,1403	0/0:14,0:14:33.11:0,33,1965	0/0:18,0:18:48.12:0,48,2325	0/0:3,0:3:6.91:0,7,347	0/0:25,0:25:69.24:0,69,4099	0/0:9,0:9:24.08:0,24,1348	0/0:19,0:19:57.20:0,57,3287	1/1:6,14:20:28.42:1122,28,0	1/1:4,15:19:23.42:901,23,0	0/0:12,0:12:25.85:0,26,1360	1/1:0,14:14:18.06:601,18,0	0/0:3,0:3:9.03:0,9,544	0/0:6,0:6:15.94:0,16,814	0/0:6,0:6:18.06:0,18,972	0/0:8,0:8:21.07:0,21,1180	0/0:5,0:5:9.01:0,9,364	0/0:21,0:21:57.20:0,57,3363	1/1:1,2:3:6.02:226,6,0	0/0:13,0:13:36.12:0,36,1851	0/0:12,0:12:33.11:0,33,1757	0/0:6,0:6:18.06:0,18,1041
chr10	17398385	.	GCACCTCATTTGTTCAGACCCT	G	12430.73	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=13.706;DP=671;FS=12.688;HRun=0;HaplotypeScore=354.2364;InbreedingCoeff=0.9956;MQ=89.31;MQ0=0;MQRankSum=-13.748;QD=97.88;ReadPosRankSum=3.605;VQSLOD=3.6308;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,114,10487	0/0:10,0:10:30.10:0,30,2772	0/0:30,0:30:81.22:0,81,4422	0/0:23,0:24:57.06:0,57,2294	0/0:26,0:26:72.25:0,72,5312	1/1:4,17:21:39.13:2149,39,0	1/1:4,15:19:24.08:1301,24,0	0/0:29,0:29:81.28:0,81,5570	0/0:25,0:25:72.22:0,72,5678	0/0:27,0:27:81.28:0,81,7488	0/0:12,0:12:36.11:0,36,3037	0/0:25,0:25:75.26:0,75,6804	0/0:27,0:27:81.28:0,81,7092	0/0:30,0:30:87.28:0,87,7819	1/1:4,17:21:48.16:2645,48,0	1/1:6,22:28:60.21:3471,60,0	0/0:30,0:30:87.26:0,87,7171	1/1:7,11:18:27.09:1562,27,0	0/0:19,0:19:51.17:0,51,4076	0/0:22,0:22:63.22:0,63,5589	0/0:55,0:55:99:0,160,13742	0/0:19,0:19:57.20:0,57,4695	0/0:12,0:12:33.11:0,33,2949	0/0:30,0:30:84.27:0,84,7050	1/1:3,17:20:24.08:1302,24,0	0/0:27,0:27:70.48:0,70,5669	0/0:20,0:20:60.18:0,60,5220	0/0:7,0:7:15.05:0,15,1297
chr10	17399198	.	T	TTGTG	1663.46	PASS	AB=0.924;AC=33;AF=0.635;AN=52;BaseQRankSum=-2.637;DP=755;FS=0.000;HRun=0;HaplotypeScore=170.8453;InbreedingCoeff=-0.1005;MQ=58.82;MQ0=22;MQRankSum=-0.146;QD=2.67;ReadPosRankSum=2.619;VQSLOD=2.5531;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:32,0:33:15.64:287,16,0	1/1:9,0:11:2.74:12,3,0	./.	./.	0/1:17,0:19:17.06:17,0,22	1/1:19,0:19:2.10:34,2,0	0/1:49,0:48:20.14:20,0,41	1/1:30,0:29:3.01:36,3,0	0/1:31,0:32:16.04:78,0,16	1/1:21,0:21:16.27:248,16,0	0/0:3,1:4:0:0,0,0	1/1:22,8:31:2.08:134,2,0	1/1:13,8:23:5.51:79,6,0	1/1:22,7:31:9.03:185,9,0	0/1:25,0:30:0.67:1,0,106	0/1:17,6:25:8.03:264,0,8	1/1:28,0:36:5.46:24,5,0	0/0:29,0:29:6.32:0,6,33	0/0:18,0:17:2.10:0,2,19	1/1:6,0:10:0.59:9,1,0	0/1:75,0:73:39.48:39,0,84	0/1:16,0:16:9.66:38,0,10	1/1:11,0:10:3.01:65,3,0	0/1:41,15:63:34.78:195,0,35	0/1:22,0:21:0.36:13,0,0	0/1:23,0:23:14.30:14,0,40	0/0:10,0:10:3:0,3,27	0/1:7,0:8:6.53:7,0,18
chr10	17399219	.	T	TGT	1411.99	PASS	AB=0.993;AC=38;AF=0.731;AN=52;BaseQRankSum=-0.790;DP=673;FS=2.216;HRun=0;HaplotypeScore=90.0051;InbreedingCoeff=-0.1875;MQ=51.16;MQ0=29;MQRankSum=-0.622;QD=2.22;ReadPosRankSum=1.047;VQSLOD=1.8550;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:32,0:32:17.85:195,18,0	1/1:11,0:10:3.01:44,3,0	./.	0/1:43,0:12:0:0,0,0	0/1:15,0:15:8.37:17,0,8	1/1:20,0:20:2.99:24,3,0	0/1:39,0:38:17.32:79,0,17	1/1:27,0:26:0.47:1,0,0	0/1:27,0:27:2.12:79,0,2	1/1:18,0:18:15.90:156,16,0	./.	1/1:27,0:25:8.95:71,9,0	1/1:23,0:23:5.61:67,6,0	1/1:26,0:26:5.92:66,6,0	0/1:26,0:26:32.27:32,0,77	0/1:23,0:23:13.12:84,0,13	1/1:38,0:38:6.02:88,6,0	0/1:26,0:26:3.38:30,0,3	1/1:15,0:14:0.89:2,1,0	1/1:15,0:14:5.93:61,6,0	0/1:54,4:57:33.09:116,0,33	0/1:14,0:14:11.71:50,0,12	1/1:6,0:5:3.01:41,3,0	0/1:63,0:62:33.29:63,0,33	1/1:18,0:17:11.73:102,12,0	0/1:14,0:14:13.01:34,0,13	0/0:11,0:10:2.84:0,3,14	0/1:11,0:9:17.28:38,0,17
chr10	17399526	.	GA	G	4963.84	PASS	AB=0.975;AC=49;AF=0.875;AN=56;BaseQRankSum=5.019;DP=600;FS=8.765;HRun=1;HaplotypeScore=120.0159;InbreedingCoeff=-0.1497;MQ=69.51;MQ0=0;MQRankSum=-4.270;QD=8.27;ReadPosRankSum=8.863;VQSLOD=1.3220;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:35,0:35:43.75:324,44,0	1/1:11,0:11:1.24:75,1,0	0/1:11,0:10:16.05:16,0,84	0/1:11,3:14:16.95:17,0,22	1/1:12,0:12:2.14:74,2,0	1/1:21,0:20:25.86:219,26,0	1/1:27,1:28:48.03:284,48,0	0/1:21,0:21:6.05:106,0,6	1/1:36,0:36:95.26:421,95,0	1/1:19,0:19:14.69:112,15,0	1/1:7,0:7:18.88:79,19,0	1/1:35,0:35:60.61:320,61,0	1/1:39,0:39:14.69:267,15,0	1/1:32,0:32:71.63:293,72,0	1/1:33,0:33:2.68:219,3,0	1/1:24,0:24:4.87:169,5,0	1/1:22,0:22:38.82:228,39,0	0/1:25,0:25:10.31:151,0,10	0/1:21,0:21:7.67:101,0,8	1/1:11,0:11:29.43:122,29,0	1/1:24,0:24:13.01:179,13,0	1/1:11,1:12:30.02:158,30,0	1/1:11,0:11:5.41:105,5,0	1/1:34,1:35:89.30:398,89,0	1/1:10,0:10:24.16:105,24,0	0/1:21,0:21:4.31:124,0,4	1/1:22,0:22:54.56:244,55,0	0/1:8,0:8:4.50:54,0,5
chr10	17399709	.	CGT	C	185.89	PASS	AB=1.000;AC=6;AF=0.111;AN=54;BaseQRankSum=-1.168;DP=716;FS=2.655;HRun=0;HaplotypeScore=158.2492;InbreedingCoeff=0.3273;MQ=67.99;MQ0=7;MQRankSum=1.483;QD=1.88;ReadPosRankSum=0.179;VQSLOD=2.8044;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:36,0:35:16.64:17,0,119	0/0:5,0:5:0:0,0,0	./.	0/1:27,0:22:0:0,0,0	1/1:10,0:10:0.47:1,0,0	0/0:26,0:24:5.64:0,6,52	0/0:33,0:33:5.97:0,6,46	0/0:24,0:23:3.01:0,3,36	0/0:25,0:28:27.01:0,27,247	0/0:25,0:25:15.03:0,15,179	0/0:12,0:12:3:0,3,26	0/0:27,0:28:21.06:0,21,287	0/0:20,0:20:3.01:0,3,44	1/1:18,6:26:26.90:270,27,0	0/0:33,0:32:6:0,6,53	0/0:27,0:26:9.01:0,9,85	0/0:37,0:36:38.45:0,38,377	0/0:24,0:23:14.98:0,15,145	0/0:19,0:19:3:0,3,26	0/0:20,0:20:6:0,6,53	0/0:69,0:70:45.05:0,45,491	0/0:19,0:18:6.02:0,6,84	0/0:13,0:12:9.03:0,9,130	0/0:50,0:51:42.64:0,43,733	0/0:18,0:18:8.64:0,9,82	0/0:31,0:30:29.92:0,30,260	0/0:12,0:12:11.97:0,12,112	0/0:11,0:11:2.98:0,3,22
chr10	17399757	.	T	TGTGTGA	5661.42	PASS	AB=1.000;AC=32;AF=0.571;AN=56;BaseQRankSum=1.334;DP=660;FS=11.430;HRun=0;HaplotypeScore=154.5396;InbreedingCoeff=0.6555;MQ=65.05;MQ0=27;MQRankSum=-1.565;QD=16.08;ReadPosRankSum=-0.144;VQSLOD=3.6895;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:27:59.06:0,59,554	1/1:6,0:6:8.64:53,9,0	0/0:34,0:16:19.25:0,19,266	0/0:68,0:32:88.35:0,88,867	1/1:7,0:7:5.99:50,6,0	1/1:19,0:18:20.98:306,21,0	1/1:36,0:35:70.08:632,70,0	0/0:24,0:24:43.68:0,44,510	0/1:20,0:20:99:165,0,149	1/1:13,0:12:30.03:316,30,0	1/1:2,4:5:3.01:94,3,0	0/0:25,0:25:59.75:0,60,731	0/0:17,0:17:38.47:0,38,344	0/0:26,0:26:65.95:0,66,741	1/1:26,0:26:15.94:306,16,0	1/1:20,0:19:27.45:285,27,0	1/1:32,3:35:77.86:1097,78,0	1/1:20,0:18:53.87:638,54,0	0/1:10,0:10:19.58:20,0,145	0/1:12,0:11:66.82:67,0,98	0/1:52,0:51:99:159,0,432	0/0:11,0:10:15.01:0,15,191	0/0:12,0:12:26.99:0,27,307	0/0:63,0:62:99:0,144,1935	1/1:19,0:19:29.75:288,30,0	1/1:22,0:21:54.84:609,55,0	1/1:20,0:18:41.91:428,42,0	1/1:5,0:5:14.95:149,15,0
chr10	17400142	.	G	GT	9497.34	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-15.648;DP=766;FS=6.053;HRun=1;HaplotypeScore=89.8709;InbreedingCoeff=0.9976;MQ=78.40;MQ0=0;MQRankSum=-2.182;QD=39.25;ReadPosRankSum=2.433;VQSLOD=5.3951;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,48:54:91.43:1838,91,0	0/0:7,0:7:18.06:0,18,234	0/0:21,0:22:55.95:0,56,628	0/0:19,0:19:45.06:0,45,512	0/0:22,0:22:57.15:0,57,700	0/0:21,0:21:51.16:0,51,659	0/0:31,0:31:90.29:0,90,1168	0/0:43,0:43:99:0,126,1611	0/0:29,0:29:87.26:0,87,1099	0/0:24,0:24:63.20:0,63,804	0/0:12,0:12:27.07:0,27,335	1/1:0,55:55:99:2334,157,0	1/1:0,38:38:99:1619,108,0	1/1:0,33:33:90.30:1349,90,0	0/0:36,0:36:99:0,105,1363	0/0:32,0:32:96.30:0,96,1233	0/0:25,0:25:72.19:0,72,901	0/0:20,0:20:57.16:0,57,724	0/0:19,0:19:57.18:0,57,738	0/0:24,0:24:54.13:0,54,657	0/0:50,0:50:99:0,138,1778	1/1:1,15:16:36.08:514,36,0	1/1:1,21:22:57.19:854,57,0	1/1:0,24:24:66.22:989,66,0	0/0:22,0:22:51.13:0,51,631	0/0:34,0:34:96.29:0,96,1217	0/0:25,0:25:75.20:0,75,933	0/0:7,0:7:21.07:0,21,273
chr10	17400613	.	T	TG	6604.51	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=2.570;DP=799;FS=2.726;HRun=4;HaplotypeScore=99.9402;InbreedingCoeff=0.9995;MQ=73.59;MQ0=0;MQRankSum=-1.259;QD=37.10;ReadPosRankSum=3.848;VQSLOD=4.0248;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:81.21:0,81,906	1/1:1,9:10:24.08:328,24,0	0/0:26,0:25:57.14:0,57,628	0/0:24,0:24:66.10:0,66,703	1/1:2,21:23:60.20:816,60,0	0/0:20,0:20:54.14:0,54,603	0/0:21,0:21:54.14:0,54,604	0/0:22,0:22:57.15:0,57,632	0/0:34,0:34:99:0,102,1147	1/1:1,24:25:72.23:966,72,0	1/1:0,19:19:57.19:779,57,0	0/0:42,0:42:99:0,117,1299	0/0:35,0:35:90.20:0,90,997	0/0:39,0:39:99:0,117,1303	0/0:45,0:45:99:0,117,1297	0/0:28,0:28:81.21:0,81,902	1/1:2,32:34:96.32:1313,96,0	0/0:28,0:28:81.15:0,81,880	0/0:36,0:36:99:0,99,1105	0/0:30,0:30:90.21:0,90,989	0/0:44,0:44:99:0,126,1419	0/0:39,0:39:99:0,114,1263	0/0:19,0:19:54.13:0,54,600	0/0:39,0:39:99:0,102,1146	0/0:21,0:21:60.16:0,60,671	1/1:3,27:30:81.26:1090,81,0	1/1:3,25:28:69.23:943,69,0	1/1:0,9:9:27.09:369,27,0
chr10	17402003	.	CAAA	C	4075.64	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=8.009;DP=527;FS=3.684;HRun=12;HaplotypeScore=93.6964;InbreedingCoeff=0.9601;MQ=54.44;MQ0=13;MQRankSum=-1.467;QD=25.96;ReadPosRankSum=4.318;VQSLOD=3.0422;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:33:81.21:0,81,1484	1/1:1,3:4:3:38,3,0	0/0:7,0:5:14.88:0,15,173	0/0:10,0:6:14.97:0,15,195	1/1:8,19:27:41.94:512,42,0	0/0:15,0:20:51.17:0,51,914	0/0:19,0:21:51.11:0,51,887	0/0:11,0:28:72.21:0,72,1039	0/0:11,0:12:33.11:0,33,634	1/1:3,17:20:48.14:607,48,0	1/1:4,12:14:27.06:341,27,0	0/0:15,0:15:36.10:0,36,655	0/0:14,0:14:27.98:0,28,534	0/0:16,0:16:42.14:0,42,814	0/0:18,0:18:45.15:0,45,884	0/0:25,0:25:57.20:0,57,1109	1/1:6,21:27:54.15:682,54,0	0/0:15,0:20:54.14:0,54,914	0/0:8,0:16:42.12:0,42,606	0/0:8,0:20:39.13:0,39,590	0/0:7,0:10:18.06:0,18,274	0/0:19,0:18:39.12:0,39,715	0/0:13,0:15:24.08:0,24,453	0/0:25,0:25:57.67:0,58,1104	0/0:16,0:17:45.62:0,46,847	1/1:2,21:22:63.19:796,63,0	1/1:1,26:27:72.20:910,72,0	1/1:4,9:10:15.04:190,15,0
chr10	17403388	.	GTCTGTCTC	G	4956.32	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=6.349;DP=733;FS=6.261;HRun=0;HaplotypeScore=208.6830;InbreedingCoeff=0.9062;MQ=53.40;MQ0=12;MQRankSum=-5.558;QD=30.98;ReadPosRankSum=-0.966;VQSLOD=3.6249;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:81.32:0,81,3476	1/1:8,1:9:23.51:465,24,0	0/0:34,0:14:29.19:0,29,479	0/0:40,0:20:45.18:0,45,1118	1/1:9,8:17:8.99:132,9,0	0/0:18,0:18:23.93:0,24,261	0/1:27,0:26:4.29:4,0,121	0/0:37,0:36:99:0,102,2160	0/0:23,0:23:48.02:0,48,1309	1/1:10,9:19:53.95:1091,54,0	1/1:11,4:14:20.93:310,21,0	0/0:44,0:44:99:0,132,5038	0/0:37,0:37:99:0,108,3415	0/0:33,0:33:95.44:0,95,3006	0/0:26,0:25:26.98:0,27,255	0/0:33,0:33:32.82:0,33,288	1/1:11,5:16:18.73:392,19,0	0/0:18,0:18:32.86:0,33,252	0/0:16,0:15:20.14:0,20,984	0/0:24,0:24:39.56:0,40,1073	0/0:31,0:31:42.07:0,42,1125	0/0:26,0:26:75.20:0,75,2691	0/0:24,0:23:66.13:0,66,2125	0/0:45,0:44:99:0,126,4525	0/0:23,0:22:28.04:0,28,414	1/1:0,32:29:83.83:1645,84,0	1/1:0,21:21:30.10:808,30,0	1/1:3,1:3:6:107,6,0
chr10	17403392	.	GTCTC	G	3155.19	PASS	AB=1.000;AC=30;AF=0.536;AN=56;BaseQRankSum=12.162;DP=732;FS=5.589;HRun=0;HaplotypeScore=171.3437;InbreedingCoeff=0.7475;MQ=51.19;MQ0=12;MQRankSum=-9.562;QD=9.62;ReadPosRankSum=-0.295;VQSLOD=2.8726;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:40:98.81:0,99,1923	1/1:9,0:9:15.30:190,15,0	0/0:34,0:12:3:0,3,75	0/0:41,0:19:30.01:0,30,562	1/1:18,0:19:3.01:48,3,0	1/1:5,13:18:9.03:153,9,0	1/1:6,16:23:9.03:116,9,0	0/1:38,0:37:24.98:25,0,670	0/0:23,0:23:36.08:0,36,672	1/1:18,0:18:45.90:443,46,0	1/1:15,0:14:6.44:93,6,0	0/0:44,0:45:99:0,126,2821	0/0:37,0:37:87.15:0,87,1858	0/0:31,0:33:74.18:0,74,1535	1/1:5,19:23:9.03:150,9,0	1/1:5,27:32:21.07:357,21,0	1/1:16,0:16:15.05:165,15,0	1/1:4,14:18:21.07:358,21,0	0/1:16,0:15:10.96:11,0,364	0/0:23,0:23:30.55:0,31,447	0/0:31,0:31:30.10:0,30,501	0/0:25,0:25:65.56:0,66,1483	0/0:24,0:24:63.13:0,63,1239	0/0:45,0:46:99:0,113,2529	1/1:8,13:22:20.94:338,21,0	1/1:32,0:29:58.88:589,59,0	1/1:22,0:21:24.52:298,25,0	1/1:4,0:3:3.01:33,3,0
chr10	17403402	.	C	CG	227.41	PASS	AB=0.933;AC=9;AF=0.161;AN=56;BaseQRankSum=4.610;DP=705;FS=17.961;HRun=0;HaplotypeScore=146.6796;InbreedingCoeff=0.2138;MQ=49.39;MQ0=19;MQRankSum=0.144;QD=1.79;ReadPosRankSum=-4.192;VQSLOD=0.2953;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,103,1338	0/1:5,2:7:57.71:63,0,58	0/0:43,0:7:21.04:0,21,262	0/0:54,0:21:44.71:0,45,565	1/1:17,1:18:3.01:46,3,0	0/0:16,0:16:14.23:0,14,102	0/0:21,0:20:8.82:0,9,33	0/0:32,0:30:90.29:0,90,1210	0/0:24,0:24:39.13:0,39,543	0/1:19,1:20:37.22:37,0,323	1/1:11,1:11:8.94:97,9,0	0/0:44,0:44:99:0,132,1817	0/0:34,0:34:99:0,99,1334	0/0:31,0:31:87.02:0,87,1158	0/0:21,0:20:11.37:0,11,79	0/0:28,0:28:22.22:0,22,123	0/1:13,1:14:34.53:35,0,51	0/0:15,0:15:22.22:0,22,124	0/0:17,0:16:45.10:0,45,576	0/0:19,0:19:29.95:0,30,419	0/0:27,0:27:30.10:0,30,420	0/0:22,0:22:66.09:0,66,896	0/0:25,0:24:69.22:0,69,963	0/0:43,0:42:99:0,123,1692	0/0:21,0:19:28.09:0,28,205	0/1:34,0:31:56.28:56,0,263	0/1:22,0:21:32.04:32,0,72	0/0:3,0:2:2.90:0,3,16
chr10	17403410	.	C	CGT	657.54	PASS	AB=1.000;AC=28;AF=0.519;AN=54;BaseQRankSum=8.337;DP=692;FS=0.000;HRun=0;HaplotypeScore=164.3249;InbreedingCoeff=0.5748;MQ=47.74;MQ0=19;MQRankSum=-7.308;QD=1.97;ReadPosRankSum=-2.758;VQSLOD=1.7831;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:75.21:0,75,888	1/1:5,0:5:2.98:8,3,0	0/1:43,0:5:3.10:3,0,29	0/0:55,0:17:16.64:0,17,209	0/0:20,0:20:0:0,0,0	0/0:14,0:14:0.43:0,0,0	1/1:20,0:19:0.47:1,0,0	0/1:28,0:26:5.50:5,0,13	1/1:5,21:26:26.45:396,26,0	1/1:27,0:26:9.69:118,10,0	./.	0/0:43,0:43:99:0,111,1310	0/0:30,0:30:74.96:0,75,844	0/0:27,0:27:48.04:0,48,542	0/1:19,0:18:0:0,0,0	0/1:27,0:27:0.01:0,0,0	1/1:18,0:18:12.54:55,13,0	1/1:15,0:15:4.31:22,4,0	1/1:13,0:13:0.47:1,0,0	1/1:16,0:16:0.47:1,0,0	0/0:26,0:26:0.23:0,0,1	0/0:23,0:24:56.97:0,57,644	0/0:27,0:26:49.66:0,50,651	0/0:46,0:45:99:0,105,1274	1/1:19,0:18:4.81:28,5,0	1/1:30,0:27:4.43:78,4,0	1/1:22,0:21:9.63:75,10,0	1/1:5,0:5:4.46:20,4,0
chr10	17403443	.	GTC	G	1525.53	PASS	AB=1.000;AC=16;AF=0.296;AN=54;BaseQRankSum=10.120;DP=530;FS=20.421;HRun=0;HaplotypeScore=113.8673;InbreedingCoeff=0.6741;MQ=46.95;MQ0=18;MQRankSum=-9.196;QD=11.22;ReadPosRankSum=-2.095;VQSLOD=1.6181;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,114,2058	0/1:9,0:9:1.24:49,0,1	0/0:35,0:7:15.05:0,15,246	0/0:55,0:19:43.37:0,43,595	0/0:16,1:17:3.99:0,4,15	0/0:7,0:7:6.37:0,6,44	./.	1/1:2,0:1:0.47:1,0,0	0/0:25,0:25:38.93:0,39,926	1/1:22,12:33:37.61:655,38,0	1/1:6,5:11:2.96:23,3,0	0/0:33,0:33:99:0,99,1766	0/0:26,0:26:78.22:0,78,1433	0/0:26,0:26:78.16:0,78,1290	0/0:11,0:11:8.71:0,9,48	0/0:7,0:7:14.63:0,15,87	1/1:13,9:22:39.92:409,40,0	0/0:6,0:6:9:0,9,78	0/0:8,0:2:3:0,3,28	0/0:1,0:1:2.96:0,3,19	0/1:7,0:6:0.42:0,0,3	0/0:21,0:21:60.11:0,60,986	0/0:25,0:24:66.21:0,66,1236	0/0:46,0:45:99:0,126,2335	0/0:2,0:2:2.90:0,3,16	1/1:21,5:23:14.55:328,15,0	1/1:15,3:19:10.05:169,10,0	1/1:3,1:4:5.81:55,6,0
chr10	17403445	.	C	CTGTGTG	2784.50	PASS	AB=0.821;AC=22;AF=0.440;AN=50;BaseQRankSum=11.373;DP=534;FS=14.636;HRun=0;HaplotypeScore=148.6640;InbreedingCoeff=0.6732;MQ=47.35;MQ0=18;MQRankSum=-9.515;QD=16.19;ReadPosRankSum=-1.655;VQSLOD=1.8647;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,114,2149	0/1:4,5:9:3.82:82,0,4	0/0:35,0:8:15.03:0,15,224	0/0:54,0:21:42.34:0,42,628	0/1:8,9:18:0:0,0,0	./.	1/1:3,0:3:2.90:16,3,0	0/0:8,0:7:8.48:0,8,41	0/0:25,0:25:48.15:0,48,1070	1/1:29,3:31:61.05:1242,61,0	1/1:12,0:11:2.99:23,3,0	0/0:33,0:33:87.27:0,87,1782	0/0:26,0:26:75.21:0,75,1593	0/0:27,0:27:75.16:0,75,1434	./.	0/1:7,0:7:1.89:2,0,17	1/1:20,1:21:23.47:518,23,0	1/1:6,0:6:3.22:13,3,0	1/1:8,0:2:2.88:15,3,0	0/0:1,0:1:1.82:0,2,5	0/1:7,0:6:0:0,0,0	0/0:21,0:21:59.68:0,60,1068	0/0:25,0:24:63.12:0,63,1397	0/0:45,0:44:99:0,123,2397	./.	1/1:24,0:21:43.89:505,44,0	1/1:19,1:20:30.88:438,31,0	1/1:3,1:4:6.02:98,6,0
chr10	17403452	.	T	TCTCTC	864.54	PASS	AB=0.896;AC=13;AF=0.250;AN=52;BaseQRankSum=5.690;DP=561;FS=14.064;HRun=0;HaplotypeScore=160.7013;InbreedingCoeff=0.6387;MQ=47.98;MQ0=18;MQRankSum=-4.917;QD=10.17;ReadPosRankSum=-1.552;VQSLOD=1.9349;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,115,2583	0/0:8,0:8:8.99:0,9,114	0/0:37,0:11:29.59:0,30,570	0/0:53,0:22:46.52:0,47,1127	0/1:17,0:17:0:0,0,0	0/0:3,6:9:3.01:0,3,35	1/1:6,0:7:2.90:38,3,0	0/1:16,0:15:12.41:12,0,33	0/0:23,0:23:51.17:0,51,1164	0/0:33,0:32:94.32:0,94,1353	0/0:11,0:10:3.01:0,3,56	0/0:32,0:32:90.29:0,90,1987	0/0:24,0:24:72.23:0,72,1606	0/0:28,0:28:81.26:0,81,1841	./.	1/1:4,7:11:9.03:204,9,0	0/0:19,0:19:34.31:0,34,519	1/1:2,6:8:15.05:430,15,0	1/1:9,0:4:9.03:243,9,0	1/1:4,0:5:3.01:83,3,0	0/1:6,0:10:0:0,0,0	0/0:22,0:22:62.79:0,63,1464	0/0:26,0:25:72.23:0,72,1609	0/0:43,0:42:99:0,120,2649	./.	0/0:22,0:19:38.98:0,39,596	0/0:21,0:19:35.09:0,35,439	0/0:4,0:4:6.02:0,6,81
chr10	17403457	.	GTATGTCTC	G	1576.75	PASS	AB=1.000;AC=18;AF=0.321;AN=56;BaseQRankSum=6.647;DP=578;FS=24.006;HRun=0;HaplotypeScore=173.9275;InbreedingCoeff=0.2948;MQ=49.19;MQ0=15;MQRankSum=-4.305;QD=8.66;ReadPosRankSum=-3.997;VQSLOD=-0.1841;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,111,4594	0/1:8,0:8:24.97:25,0,132	0/0:38,0:13:36.11:0,36,1146	0/0:49,0:23:57.01:0,57,1932	0/0:15,0:16:7.19:0,7,92	0/1:10,0:10:23.08:62,0,23	1/1:7,1:8:3.01:30,3,0	1/1:1,17:17:51.08:759,51,0	0/0:24,0:24:54.17:0,54,2049	0/1:31,0:30:25.94:26,0,1631	0/0:10,0:9:3.01:0,3,87	0/0:32,0:32:93.29:0,93,3175	0/0:24,0:24:72.23:0,72,2924	0/0:28,0:28:84.29:0,84,3380	0/1:21,0:21:21.63:67,0,22	0/1:15,0:15:15.82:138,0,16	0/0:21,0:21:42.61:0,43,1055	1/1:11,0:11:14.70:107,15,0	1/1:11,0:8:21:288,21,0	1/1:6,0:6:6.02:72,6,0	0/1:17,0:16:7.37:126,0,7	0/0:22,0:22:63.67:0,64,2333	0/0:26,0:25:72.20:0,72,2887	0/0:40,0:39:99:0,111,3865	0/1:5,0:5:6.20:36,0,6	0/0:14,0:14:18.15:0,18,765	0/1:21,0:19:20.42:20,0,734	0/0:9,0:9:21.07:0,21,642
chr10	17404618	.	CT	C	5070.23	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=15.766;DP=603;FS=29.146;HRun=1;HaplotypeScore=74.2612;InbreedingCoeff=0.9935;MQ=86.54;MQ0=0;MQRankSum=-2.692;QD=38.70;ReadPosRankSum=3.747;VQSLOD=2.8522;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,138,2129	1/1:0,7:7:21.07:294,21,0	0/0:18,0:18:51.09:0,51,744	0/0:21,0:23:51.17:0,51,799	1/1:1,14:15:39.13:543,39,0	0/0:21,0:21:63.21:0,63,1006	0/0:33,0:33:99:0,99,1560	0/0:22,0:22:66.23:0,66,1053	0/0:17,0:17:51.17:0,51,815	1/1:0,18:18:51.17:712,51,0	1/1:0,11:11:27.09:378,27,0	0/0:22,0:22:63.20:0,63,981	0/0:19,0:19:57.19:0,57,908	0/0:26,0:26:75.24:0,75,1175	0/0:30,0:29:87.28:0,87,1366	0/0:20,0:20:60.20:0,60,959	1/1:0,35:35:99:1385,99,0	0/0:35,0:35:99:0,105,1666	0/0:24,0:24:72.24:0,72,1140	0/0:12,0:12:36.12:0,36,575	0/0:38,0:38:99:0,111,1739	0/0:12,0:12:36.11:0,36,552	0/0:8,0:8:24.08:0,24,383	0/0:35,0:35:99:0,102,1630	0/0:11,0:11:33.11:0,33,528	1/1:0,16:16:48.16:670,48,0	1/1:0,23:23:66.22:922,66,0	1/1:0,6:6:12.04:168,12,0
chr10	17404733	.	TC	T	6182.31	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=16.083;DP=427;FS=18.469;HRun=2;HaplotypeScore=65.4861;InbreedingCoeff=0.9783;MQ=90.03;MQ0=0;MQRankSum=-2.796;QD=35.74;ReadPosRankSum=-1.237;VQSLOD=2.7650;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:72.17:0,72,1029	1/1:0,3:3:6.02:78,6,0	0/0:20,0:20:50.35:0,50,803	0/0:18,0:18:54.18:0,54,788	1/1:1,14:15:42.14:545,42,0	0/0:15,0:15:45.15:0,45,674	0/0:15,0:15:45.15:0,45,674	1/1:2,21:23:63.20:815,63,0	0/0:14,0:14:42.02:0,42,558	1/1:1,12:13:36.09:435,36,0	1/1:1,6:7:18:214,18,0	0/0:12,0:12:33.09:0,33,473	0/0:11,0:11:33.11:0,33,494	0/0:11,0:11:33.11:0,33,495	0/0:23,0:23:69.23:0,69,1033	0/0:9,0:9:27.09:0,27,405	1/1:1,27:28:78.25:1012,78,0	0/0:25,0:25:75.24:0,75,1104	1/1:0,15:15:45.11:555,45,0	1/1:0,8:8:21.01:253,21,0	1/1:0,23:23:69.14:857,69,0	0/0:10,0:10:27.08:0,27,384	0/0:11,0:11:33.10:0,33,473	0/0:20,0:20:57.15:0,57,829	0/0:13,0:13:39.13:0,39,583	1/1:0,7:7:21.06:253,21,0	1/1:0,27:27:78.25:1011,78,0	1/1:0,4:4:12.04:156,12,0
chr10	17405261	.	GC	G	1578.84	PASS	AB=0.889;AC=25;AF=0.446;AN=56;BaseQRankSum=-1.380;DP=245;FS=14.632;HRun=7;HaplotypeScore=44.7417;InbreedingCoeff=0.5942;MQ=76.74;MQ0=3;MQRankSum=-0.707;QD=10.60;ReadPosRankSum=-1.384;VQSLOD=0.3283;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:44.99:0,45,502	1/1:0,3:3:6.01:58,6,0	0/1:24,0:9:21.23:21,0,118	0/1:24,0:13:10.21:10,0,73	1/1:4,7:11:24.03:235,24,0	0/0:8,0:8:21.03:0,21,242	0/0:9,0:6:6.01:0,6,71	1/1:11,3:14:24.62:198,25,0	0/0:4,0:4:8.20:0,8,79	1/1:4,4:8:20.94:178,21,0	1/1:2,5:7:15.99:154,16,0	0/0:8,0:8:20.89:0,21,195	0/0:5,0:5:11.99:0,12,124	0/0:2,0:2:1.18:0,1,34	0/0:3,0:3:5.97:0,6,49	0/0:7,0:7:16.12:0,16,215	1/1:1,11:12:7.34:224,7,0	0/0:8,0:8:18.04:0,18,209	1/1:7,3:10:1.19:141,1,0	0/1:4,4:8:24.56:104,0,25	1/1:3,3:6:11.99:111,12,0	0/0:6,0:6:15.05:0,15,187	0/0:3,0:3:9.03:0,9,106	0/0:7,0:7:20.43:0,20,227	0/0:8,0:8:20.98:0,21,227	1/1:5,0:5:0.56:46,1,0	1/1:0,9:9:18.04:182,18,0	1/1:2,4:6:10.08:113,10,0
chr10	17406128	.	T	TAA	3598.28	PASS	AB=0.902;AC=25;AF=0.446;AN=56;BaseQRankSum=0.111;DP=637;FS=0.838;HRun=14;HaplotypeScore=109.3109;InbreedingCoeff=0.7990;MQ=68.98;MQ0=0;MQRankSum=-1.153;QD=12.28;ReadPosRankSum=-4.935;VQSLOD=1.4536;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:53:63.08:0,63,626	1/1:4,4:9:8.39:86,8,0	0/0:19,0:15:21.54:0,22,188	0/1:17,0:15:10.24:10,0,94	1/1:9,11:23:34.15:346,34,0	0/1:21,1:22:28.92:29,0,209	0/0:20,0:21:41.38:0,41,324	1/1:13,8:27:43.83:446,44,0	0/0:16,0:19:23.36:0,23,225	1/1:12,13:29:44.45:486,44,0	1/1:9,6:16:16.81:167,17,0	0/0:29,0:29:50.49:0,50,426	0/0:19,0:20:14.40:0,14,255	0/0:25,0:25:44.62:0,45,372	0/0:24,0:26:44.26:0,44,362	0/0:19,0:23:37.91:0,38,299	1/1:5,24:32:26.97:286,27,0	0/0:24,0:28:43.83:0,44,377	1/1:7,7:15:23.46:218,23,0	1/1:11,10:24:38.31:370,38,0	1/1:1,9:10:18.06:236,18,0	0/0:18,0:22:20.41:0,20,205	0/0:17,0:20:16.17:0,16,222	0/0:18,0:19:29.76:0,30,292	0/0:16,0:18:23.72:0,24,242	1/1:12,13:28:50.05:503,50,0	1/1:5,17:25:18.52:223,19,0	0/1:10,4:15:1.86:194,0,2
chr10	17408500	.	GAC	G	1315.97	PASS	AB=0.899;AC=30;AF=0.600;AN=50;BaseQRankSum=-2.152;DP=502;FS=19.477;HRun=0;HaplotypeScore=79.8199;InbreedingCoeff=0.2546;MQ=66.40;MQ0=9;MQRankSum=1.590;QD=3.58;ReadPosRankSum=0.298;VQSLOD=0.7318;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:26,8:35:62.62:134,0,63	0/0:3,0:3:3.01:0,3,36	./.	./.	0/0:8,0:13:2.70:0,3,28	1/1:12,0:12:3:26,3,0	1/1:17,0:18:8.65:59,9,0	./.	0/1:16,2:19:39.03:39,0,140	0/0:16,0:16:14.34:0,14,111	0/1:8,0:15:0:0,0,0	0/1:20,2:25:0.73:126,0,1	1/1:5,4:9:6.01:65,6,0	1/1:13,0:13:3.01:32,3,0	1/1:12,7:21:14.87:144,15,0	1/1:19,0:20:11.60:109,12,0	0/1:10,0:18:5.61:6,0,79	1/1:11,5:19:4.35:142,4,0	0/1:16,0:21:12.37:12,0,51	1/1:13,0:12:1.12:18,1,0	0/1:28,0:28:14.41:19,0,14	1/1:9,0:9:4.82:38,5,0	1/1:11,5:16:9.02:97,9,0	1/1:14,19:37:32.53:338,33,0	0/1:14,2:16:0.22:67,0,0	0/0:18,0:19:28.08:0,28,213	0/0:12,0:13:11.70:0,12,82	0/0:8,0:9:14.20:0,14,123
chr10	17408545	.	ACG	A	133.54	PASS	AB=0.966;AC=14;AF=0.250;AN=56;BaseQRankSum=7.463;DP=536;FS=15.544;HRun=0;HaplotypeScore=94.5817;InbreedingCoeff=-0.3340;MQ=54.90;MQ0=10;MQRankSum=1.790;QD=0.52;ReadPosRankSum=0.785;VQSLOD=0.9627;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:1.09:0,1,440	0/0:4,0:4:11.57:0,12,74	0/0:20,0:14:27.98:0,28,250	0/0:20,0:9:20.87:0,21,181	0/0:18,0:18:36.70:0,37,283	0/1:14,4:18:6.67:7,0,195	0/0:31,0:31:54.31:0,54,411	0/0:17,0:15:40.55:0,41,290	0/1:16,0:15:26.56:27,0,223	0/0:18,0:17:15.70:0,16,346	0/0:12,0:12:11.75:0,12,87	0/1:18,0:18:20.14:20,0,252	0/0:14,0:14:5.69:0,6,135	0/1:7,5:12:19.04:19,0,83	0/1:19,0:19:6.71:7,0,148	0/1:15,0:15:20.73:21,0,195	0/1:28,0:28:27.34:27,0,223	0/1:22,0:22:27.75:28,0,214	0/1:18,0:18:5.97:6,0,168	0/1:17,0:16:21.74:22,0,78	0/0:38,0:33:42.16:0,42,429	0/1:8,0:7:14.96:15,0,60	0/1:9,0:9:39.16:39,0,56	0/1:43,0:43:38.20:38,0,272	0/1:12,0:12:6.32:6,0,103	0/0:22,0:22:28.37:0,28,351	0/0:15,0:14:18.20:0,18,150	0/0:10,0:10:20.53:0,21,170
chr10	17408641	.	CA	C	2404.99	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=1.667;DP=537;FS=1.564;HRun=3;HaplotypeScore=72.6695;InbreedingCoeff=0.9996;MQ=91.23;MQ0=1;MQRankSum=-4.032;QD=30.44;ReadPosRankSum=-1.341;VQSLOD=2.9450;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:69.17:0,69,948	0/0:10,0:10:30.10:0,30,432	0/0:24,0:21:57.12:0,57,786	0/0:26,0:25:67.21:0,67,986	0/0:14,0:14:42.12:0,42,569	0/0:13,0:13:39.13:0,39,561	0/0:18,0:18:48.16:0,48,688	1/1:2,22:23:63.20:781,63,0	0/0:14,0:13:36.11:0,36,500	0/0:32,0:32:87.28:0,87,1220	0/0:14,0:14:42.14:0,42,604	0/0:16,0:16:48.15:0,48,672	0/0:15,0:15:45.15:0,45,648	0/0:10,0:10:30.10:0,30,431	0/0:23,0:23:60.17:0,60,827	0/0:17,0:17:51.17:0,51,734	0/0:34,0:34:93.28:0,93,1301	0/0:14,0:14:39.12:0,39,539	1/1:0,15:15:42.13:521,42,0	1/1:1,18:19:45.14:558,45,0	1/1:0,21:21:57.18:706,57,0	0/0:16,0:16:45.15:0,45,648	0/0:16,0:16:48.16:0,48,691	0/0:20,0:20:54.16:0,54,758	0/0:17,0:17:42.14:0,42,605	0/0:23,0:23:60.19:0,60,832	0/0:15,0:14:39.11:0,39,540	0/0:25,0:25:69.23:0,69,992
chr10	17408656	.	TA	T	1618.40	PASS	AB=0.775;AC=17;AF=0.304;AN=56;BaseQRankSum=6.168;DP=573;FS=0.844;HRun=15;HaplotypeScore=77.6182;InbreedingCoeff=0.6911;MQ=74.63;MQ0=1;MQRankSum=0.397;QD=7.74;ReadPosRankSum=4.328;VQSLOD=3.0397;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,2:36:30.23:0,30,487	1/1:4,7:11:17.69:115,18,0	0/0:15,1:9:5.87:0,6,39	0/0:17,0:16:8.39:0,8,39	0/1:6,9:16:27.12:95,0,27	0/0:15,0:15:33.79:0,34,275	0/0:18,1:19:9.65:0,10,210	0/0:19,0:18:23.94:0,24,195	0/1:13,2:15:8.11:8,0,169	1/1:12,15:28:46.27:293,46,0	1/1:6,11:18:28.50:176,28,0	0/0:18,1:21:20.84:0,21,331	0/0:18,0:19:38.04:0,38,339	0/0:14,0:14:37.19:0,37,304	0/0:21,4:25:3.45:0,3,273	0/0:21,0:21:41.96:0,42,358	1/1:10,23:34:47.59:374,48,0	0/1:15,4:19:26.81:27,0,140	0/0:22,1:23:37.03:0,37,334	0/0:19,0:21:35.82:0,36,312	0/0:15,1:17:18.45:0,18,155	0/0:15,1:17:13.54:0,14,221	0/0:16,2:18:13.71:0,14,241	0/0:19,1:20:25.60:0,26,325	0/0:20,1:26:28.08:0,28,372	1/1:7,12:23:31.45:201,31,0	1/1:7,10:18:27.55:165,28,0	1/1:5,21:26:56:362,56,0
chr10	17408861	.	TA	T	669.64	PASS	AB=0.846;AC=12;AF=0.214;AN=56;BaseQRankSum=4.431;DP=599;FS=1.573;HRun=14;HaplotypeScore=70.9948;InbreedingCoeff=0.1602;MQ=68.62;MQ0=4;MQRankSum=1.694;QD=3.30;ReadPosRankSum=2.212;VQSLOD=0.1161;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:25,2:27:1.24:1,0,370	0/0:5,0:5:11.98:0,12,101	0/0:38,0:21:23.30:0,23,147	0/0:23,0:12:8.13:0,8,63	0/0:19,0:18:33.38:0,33,273	0/0:21,1:22:30.37:0,30,406	0/0:19,2:21:24.46:0,24,365	0/1:15,15:31:4.92:244,0,5	0/0:23,1:24:30.36:0,30,391	0/1:18,2:19:30.68:31,0,258	0/1:15,0:15:1.90:2,0,95	0/0:31,1:32:54.22:0,54,594	0/1:15,2:17:1.37:1,0,282	0/0:16,1:17:18.39:0,18,296	0/0:36,4:40:10.27:0,10,498	0/0:27,3:30:45.41:0,45,523	0/0:16,1:17:16.97:0,17,275	0/1:12,2:15:11.61:12,0,145	1/1:3,13:16:0.78:222,1,0	1/1:5,12:17:20.58:140,21,0	0/1:7,14:21:40.85:149,0,41	0/0:7,0:7:17.79:0,18,146	0/0:12,1:14:6.34:0,6,181	0/0:20,4:26:9.60:0,10,338	0/0:19,0:19:20.59:0,21,289	0/0:25,4:30:3.66:0,4,285	0/1:20,3:23:0.97:1,0,272	0/0:11,0:11:29.96:0,30,255
chr10	17409836	.	CGTGTGTGTGT	C	513.37	PASS	AB=0.992;AC=12;AF=0.261;AN=46;BaseQRankSum=4.196;DP=586;FS=13.765;HRun=0;HaplotypeScore=164.4022;InbreedingCoeff=0.4162;MQ=71.77;MQ0=11;MQRankSum=-2.023;QD=2.33;ReadPosRankSum=0.635;VQSLOD=2.2084;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:19:2.99:0,3,24	0/0:5,0:6:2.60:0,3,10	./.	./.	0/0:16,0:18:3.01:0,3,53	0/0:9,0:9:15.05:0,15,669	0/0:30,0:31:21.06:0,21,655	0/0:16,0:15:1.82:0,2,6	0/0:30,0:30:34.02:0,34,1263	0/0:18,0:18:12.03:0,12,204	0/0:10,0:9:6.02:0,6,176	1/1:32,4:37:5.73:157,6,0	1/1:23,7:30:6.02:153,6,0	1/1:20,1:22:8.84:177,9,0	0/0:18,0:20:27.09:0,27,1025	0/0:10,0:9:12.04:0,12,481	0/0:14,0:24:2.94:0,3,18	0/0:27,0:27:42.14:0,42,1684	0/1:15,0:15:10.94:11,0,19	./.	0/1:59,0:58:9.67:10,0,19	0/0:7,0:9:8.95:0,9,69	1/1:10,3:13:3.01:88,3,0	1/1:37,6:41:1.89:52,2,0	./.	0/0:19,0:20:13.01:0,13,106	0/0:13,0:13:2.99:0,3,23	./.
chr10	17410694	.	TACACACAC	T	249.45	PASS	AC=20;AF=0.556;AN=36;BaseQRankSum=1.404;DP=534;FS=14.876;HRun=0;HaplotypeScore=117.8888;InbreedingCoeff=0.5370;MQ=74.04;MQ0=15;MQRankSum=-1.048;QD=1.25;ReadPosRankSum=1.439;VQSLOD=1.3857;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:32,0:31:2.77:23,3,0	./.	./.	./.	1/1:16,0:15:3.40:18,3,0	0/0:18,0:18:10.39:0,10,171	0/0:22,0:23:9.03:0,9,177	./.	0/0:16,0:18:3.01:0,3,104	./.	./.	./.	1/1:12,0:14:5.74:79,6,0	./.	0/0:14,0:17:12.50:0,12,224	0/0:13,0:17:12.04:0,12,264	1/1:23,0:23:5.78:47,6,0	0/0:15,0:13:12.04:0,12,253	1/1:14,1:15:3.01:74,3,0	1/1:9,0:9:3.47:26,3,0	1/1:50,0:48:3.44:21,3,0	./.	1/1:11,0:11:0.47:1,0,0	0/0:23,5:26:0:0,0,0	0/0:16,0:16:9.02:0,9,165	1/1:15,0:16:2.90:16,3,0	1/1:12,2:13:3.01:74,3,0	./.
chr10	17412519	.	G	GGGGACC	9126.18	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-5.098;DP=685;FS=0.852;HRun=0;HaplotypeScore=139.2808;InbreedingCoeff=0.9503;MQ=79.06;MQ0=0;MQRankSum=-13.469;QD=63.38;ReadPosRankSum=-0.572;VQSLOD=4.7869;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,144,3141	1/1:1,2:3:2.99:102,3,0	0/0:17,0:17:30.07:0,30,558	0/0:20,0:20:44.94:0,45,900	1/1:2,10:12:30.10:1011,30,0	0/0:22,0:22:63.21:0,63,1304	0/0:35,0:35:96.33:0,96,2113	0/0:16,0:16:27.08:0,27,545	0/0:27,0:27:78.21:0,78,1625	1/1:15,12:28:51.15:1482,51,0	1/1:5,6:12:18.06:615,18,0	0/0:35,0:35:93.32:0,93,2075	0/0:23,0:23:63.22:0,63,1405	0/0:28,0:28:66.23:0,66,1469	0/0:23,0:23:66.23:0,66,1414	0/0:23,0:23:63.21:0,63,1324	1/1:8,18:28:57.19:1834,57,0	0/0:38,0:38:99:0,105,2195	0/0:23,0:23:54.13:0,54,1106	0/0:16,0:16:42.13:0,42,853	0/0:56,0:56:99:0,144,3009	0/0:11,0:11:27.09:0,27,603	0/0:15,0:15:42.11:0,42,850	0/0:41,0:41:99:0,108,2298	0/0:19,0:19:54.05:0,54,1020	1/1:8,23:31:75.25:2471,75,0	1/1:7,17:25:42.14:1431,42,0	1/1:3,1:4:6.02:181,6,0
chr10	17414503	.	TAG	T	8325.95	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=15.053;DP=832;FS=7.042;HRun=0;HaplotypeScore=101.1628;InbreedingCoeff=0.9945;MQ=90.42;MQ0=0;MQRankSum=-7.362;QD=44.52;ReadPosRankSum=4.239;VQSLOD=6.3304;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:58:99:0,175,3437	1/1:0,6:6:12.04:196,12,0	0/0:30,0:31:93.24:0,93,1715	0/0:33,0:33:99:0,99,1894	1/1:0,21:21:51.17:832,51,0	0/0:21,0:21:63.20:0,63,1232	0/0:37,0:37:99:0,111,2124	0/0:29,0:29:87.28:0,87,1672	0/0:26,0:26:78.27:0,78,1581	1/1:0,45:45:99:2044,129,0	1/1:0,12:12:36.12:587,36,0	0/0:53,0:53:99:0,157,3064	0/0:30,0:30:90.31:0,90,1798	0/0:35,0:35:99:0,105,2081	0/0:26,0:26:78.25:0,78,1533	0/0:33,0:33:99:0,99,1931	1/1:0,45:45:99:2006,123,0	0/0:30,0:29:87.27:0,87,1682	0/0:27,0:27:81.27:0,81,1565	0/0:15,0:15:45.14:0,45,867	0/0:63,0:63:99:0,190,3797	0/0:17,0:17:51.18:0,51,1026	0/0:26,0:26:78.21:0,78,1471	0/0:31,0:31:93.32:0,93,1855	0/0:24,0:24:69.24:0,69,1400	1/1:0,26:26:78.26:1242,78,0	1/1:0,24:24:62.98:1028,63,0	1/1:0,8:8:24.08:391,24,0
chr10	17416004	.	ATCC	A	8223.28	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=15.239;DP=747;FS=0.666;HRun=0;HaplotypeScore=107.7684;InbreedingCoeff=0.9997;MQ=82.95;MQ0=0;MQRankSum=-3.618;QD=47.53;ReadPosRankSum=3.043;VQSLOD=6.7568;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,135,3123	1/1:0,9:9:27.09:476,27,0	0/0:27,0:27:77.93:0,78,1584	0/0:21,0:21:60.20:0,60,1305	1/1:1,24:25:69.19:1129,69,0	0/0:20,0:20:60.19:0,60,1373	0/0:29,0:29:84.29:0,84,1967	0/0:27,0:27:75.26:0,75,1758	0/0:28,0:28:81.28:0,81,1879	1/1:0,30:30:87.29:1489,87,0	1/1:0,18:18:45.11:760,45,0	0/0:44,0:44:99:0,129,2994	0/0:31,0:31:93.32:0,93,2199	0/0:24,0:24:72.23:0,72,1654	0/0:31,0:31:93.32:0,93,2166	0/0:34,0:34:99:0,99,2243	1/1:1,29:30:75.26:1323,75,0	0/0:24,0:24:72.25:0,72,1676	0/0:22,0:22:63.22:0,63,1476	0/0:21,0:21:63.22:0,63,1467	0/0:43,0:43:99:0,126,2959	0/0:22,0:22:66.23:0,66,1506	0/0:18,0:18:51.18:0,51,1206	0/0:30,0:30:90.27:0,90,2066	0/0:33,0:33:99:0,99,2282	1/1:0,30:30:90.31:1564,90,0	1/1:0,20:20:57.20:1005,57,0	1/1:2,9:11:27.09:476,27,0
chr10	17417232	.	TA	T	2215.74	PASS	AB=0.817;AC=18;AF=0.360;AN=50;BaseQRankSum=12.568;DP=1301;FS=149.039;HRun=1;HaplotypeScore=195.5607;InbreedingCoeff=0.0089;MQ=27.91;MQ0=308;MQRankSum=-10.512;QD=2.34;ReadPosRankSum=-1.522;VQSLOD=-0.4877;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:70,28:40:99:233,0,516	./.	0/0:38,0:4:9.03:0,9,144	0/0:33,0:8:24.08:0,24,383	1/1:2,2:2:5.67:28,6,0	0/0:22,0:19:42.14:0,42,670	0/0:45,0:32:78.27:0,78,1246	0/1:58,9:25:56.18:56,0,863	0/0:39,0:31:69.24:0,69,1102	1/1:6,1:1:3.01:42,3,0	./.	0/1:95,27:74:99:439,0,1289	0/1:58,20:44:99:317,0,866	0/1:69,29:61:99:626,0,974	0/0:53,0:40:99:0,99,1580	0/0:38,0:34:72.25:0,72,1149	0/1:21,9:11:68.32:265,0,68	0/0:30,0:25:69.24:0,69,1102	0/1:51,8:23:14.37:14,0,904	0/0:15,0:8:12.04:0,12,192	0/1:180,58:143:46.99:47,0,2169	0/1:35,5:22:5.26:5,0,491	0/0:14,0:6:9.03:0,9,144	0/1:66,26:45:99:180,0,463	0/0:20,0:12:30.10:0,30,480	./.	1/1:6,3:4:6.02:78,6,0	1/1:2,1:2:3.01:42,3,0
chr10	17417329	.	ATGTAGACAGCACTGGGTGGTGAGCC	A	5345.83	PASS	AB=0.988;AC=18;AF=0.346;AN=52;BaseQRankSum=7.506;DP=1799;DS;FS=142.577;HRun=0;HaplotypeScore=454.4508;InbreedingCoeff=-0.2712;MQ=28.30;MQ0=543;MQRankSum=0.145;QD=4.35;ReadPosRankSum=1.719;VQSLOD=-0.6408;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:102,0:46:99:372,0,321	0/1:13,0:4:15.42:43,0,15	./.	./.	0/1:20,0:7:37:37,0,105	0/0:23,0:12:18.06:0,18,264	0/0:48,0:24:39.13:0,39,569	0/0:70,0:6:4.78:0,5,77	0/0:49,0:32:51.07:0,51,742	0/1:57,0:9:60.75:61,0,173	0/1:19,0:6:22.73:53,0,23	0/1:170,0:118:99:833,0,2030	0/1:104,0:65:99:436,0,1115	0/1:134,0:105:99:691,0,1692	0/0:44,0:27:45.15:0,45,716	0/0:45,0:22:51.17:0,51,764	0/0:49,0:23:21.04:0,21,283	0/0:40,0:27:59.19:0,59,912	1/1:35,0:5:6.02:97,6,0	0/1:48,0:20:99:308,0,224	0/1:250,0:150:99:1112,0,1290	0/1:47,0:16:99:206,0,202	0/0:31,21:31:7.06:0,7,56	0/1:141,0:94:99:894,0,1095	0/0:47,0:32:33.11:0,33,537	0/1:42,10:17:90.19:90,0,158	0/1:24,0:11:29.88:73,0,30	1/1:13,0:3:3.01:41,3,0
chr10	17419475	.	AG	A	7840.53	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=9.905;DP=475;FS=2.808;HRun=3;HaplotypeScore=47.3140;InbreedingCoeff=0.9976;MQ=91.14;MQ0=0;MQRankSum=-6.571;QD=37.51;ReadPosRankSum=0.523;VQSLOD=5.0674;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,35:35:87.29:1217,87,0	0/0:9,0:9:24.08:0,24,379	0/0:19,0:19:57.19:0,57,891	0/0:18,0:18:54.18:0,54,821	0/0:11,0:11:33.11:0,33,508	0/0:11,0:11:33.11:0,33,527	0/0:17,0:17:51.14:0,51,765	1/1:0,21:21:60.19:819,60,0	0/0:17,0:17:51.17:0,51,809	0/0:10,0:10:30.10:0,30,480	0/0:9,0:9:27.09:0,27,432	1/1:0,25:25:69.23:964,69,0	1/1:1,10:11:27.09:376,27,0	1/1:0,18:18:51.17:710,51,0	0/0:19,0:19:57.19:0,57,896	0/0:22,0:22:66.23:0,66,1053	0/0:27,0:27:81.25:0,81,1264	0/0:27,0:27:81.23:0,81,1244	1/1:0,8:8:24.08:335,24,0	1/1:0,10:10:27.09:378,27,0	1/1:1,26:27:72.21:986,72,0	1/1:0,9:9:24.08:335,24,0	1/1:0,9:9:24.08:335,24,0	1/1:0,36:36:99:1384,99,0	0/0:12,0:12:36.10:0,36,550	0/0:15,0:15:45.14:0,45,696	0/0:16,0:16:48.16:0,48,762	0/0:7,0:7:21.07:0,21,333
chr10	17419771	.	GC	G	6941.02	PASS	AB=0.840;AC=35;AF=0.625;AN=56;BaseQRankSum=-5.816;DP=559;FS=4.998;HRun=10;HaplotypeScore=68.6036;InbreedingCoeff=0.6718;MQ=64.17;MQ0=0;MQRankSum=0.196;QD=15.25;ReadPosRankSum=2.527;VQSLOD=5.4240;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,13:25:37.99:318,38,0	0/0:6,0:6:5.68:0,6,28	0/1:8,0:7:18.43:18,0,55	0/0:5,0:5:8.22:0,8,51	0/0:6,0:6:8.86:0,9,59	1/1:2,17:19:35.99:312,36,0	1/1:8,17:25:35.63:312,36,0	1/1:9,15:24:18.34:291,18,0	0/1:22,4:26:21:21,0,443	0/0:16,0:16:29.03:0,29,185	0/0:6,0:6:2.84:0,3,14	1/1:11,24:36:67.99:578,68,0	1/1:3,17:21:44.01:370,44,0	1/1:6,33:39:66.94:753,67,0	1/1:6,27:34:73.80:631,74,0	1/1:6,29:36:83.01:709,83,0	0/0:28,0:28:53.98:0,54,273	1/1:5,24:33:66.01:609,66,0	0/1:7,7:15:13.17:116,0,13	1/1:2,4:6:3.46:27,3,0	1/1:8,38:47:94.94:806,95,0	1/1:2,7:9:17.99:156,18,0	1/1:3,4:7:11.97:104,12,0	1/1:9,20:29:47.96:417,48,0	1/1:2,14:16:44.98:390,45,0	0/0:14,0:14:23.46:0,23,161	0/0:17,0:16:25.37:0,25,125	0/0:4,0:5:8.52:0,9,42
chr10	17419780	.	C	CCCA	2333.06	PASS	AB=1.000;AC=18;AF=0.321;AN=56;BaseQRankSum=-6.149;DP=579;FS=2.509;HRun=0;HaplotypeScore=125.3918;InbreedingCoeff=0.7468;MQ=67.54;MQ0=0;MQRankSum=-1.781;QD=16.32;ReadPosRankSum=0.775;VQSLOD=3.0713;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:51:0,51,447	1/1:0,4:6:6.02:129,6,0	0/1:12,0:11:9.05:9,0,91	0/1:6,0:5:25.19:30,0,25	1/1:5,5:12:2.94:18,3,0	0/0:22,0:22:41.98:0,42,365	0/0:20,0:20:41.90:0,42,368	0/0:19,0:19:54:0,54,488	0/0:27,0:27:54.07:0,54,708	1/1:4,5:14:25.84:394,26,0	1/1:0,6:9:3.01:65,3,0	0/0:32,0:32:80.99:0,81,709	0/0:22,0:22:51.01:0,51,448	0/0:40,0:40:98.96:0,99,863	0/0:32,0:32:84.04:0,84,746	0/0:33,0:33:90.05:0,90,800	1/1:10,19:36:51.15:970,51,0	0/0:36,1:37:34.64:0,35,777	0/0:12,0:12:32.94:0,33,301	0/0:6,0:6:8.95:0,9,71	0/0:52,0:52:99:0,120,1041	0/0:11,0:11:26.95:0,27,227	0/0:12,0:12:23.59:0,24,192	0/0:21,0:21:51.03:0,51,454	0/0:18,0:18:48.02:0,48,426	1/1:12,1:17:21.02:291,21,0	1/1:2,15:23:26.47:507,26,0	1/1:2,3:8:8.99:113,9,0
chr10	17419962	.	GATCT	G	5855.48	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=14.101;DP=713;FS=6.801;HRun=0;HaplotypeScore=120.1904;InbreedingCoeff=0.9963;MQ=80.49;MQ0=1;MQRankSum=-7.404;QD=44.03;ReadPosRankSum=1.869;VQSLOD=5.2393;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,148,3917	1/1:0,11:11:33.07:580,33,0	0/0:26,0:25:64.72:0,65,1502	0/0:32,0:31:76.46:0,76,1903	1/1:1,11:12:29.89:482,30,0	0/0:25,0:25:66.21:0,66,1705	0/0:35,0:35:99:0,102,2642	0/0:23,0:23:66.23:0,66,1726	0/0:29,0:29:84.29:0,84,2185	1/1:1,17:18:48.16:889,48,0	1/1:0,8:8:15.01:244,15,0	0/0:40,0:40:99:0,111,2837	0/0:23,0:23:60.21:0,60,1592	0/0:31,0:31:87.30:0,87,2305	0/0:38,0:38:99:0,105,2732	0/0:36,0:36:99:0,105,2800	1/1:1,30:31:63.17:1156,63,0	0/0:32,1:33:37.48:0,37,2242	0/0:24,0:24:63.22:0,63,1668	0/0:20,0:20:60.21:0,60,1516	0/0:51,0:51:99:0,144,3783	0/0:18,0:18:45.15:0,45,1194	0/0:10,0:10:27.09:0,27,682	0/0:26,0:26:72.23:0,72,1855	0/0:11,0:11:33.11:0,33,879	1/1:1,20:21:60.19:1087,60,0	1/1:1,22:23:57.15:1026,57,0	1/1:1,8:9:21.07:392,21,0
chr10	17421588	.	AGGAGGAGCAG	A	3959.09	PASS	AB=0.895;AC=16;AF=0.320;AN=50;BaseQRankSum=1.530;DP=846;DS;FS=43.353;HRun=0;HaplotypeScore=166.0459;InbreedingCoeff=-0.2232;MQ=30.62;MQ0=207;MQRankSum=-5.659;QD=7.30;ReadPosRankSum=0.620;VQSLOD=1.2959;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:44,4:27:94.27:94,0,751	./.	./.	./.	0/0:5,4:6:1.25:0,1,3	0/0:15,0:11:15.05:0,15,660	0/0:39,0:33:56.78:0,57,2461	0/0:60,0:8:14.94:0,15,201	0/0:13,0:12:26.74:0,27,1365	0/1:12,3:5:65.97:284,0,66	0/1:9,1:4:0:0,0,0	0/1:56,14:41:99:1154,0,952	0/1:38,3:14:99:275,0,298	0/1:41,4:29:99:474,0,631	0/0:27,0:24:51.18:0,51,2343	0/0:37,0:28:66.14:0,66,2471	0/1:24,2:20:99:121,0,316	0/0:43,0:33:69.23:0,69,2991	0/0:38,0:10:27.09:0,27,951	0/1:22,7:17:99:189,0,150	0/1:111,6:67:37.26:37,0,836	0/1:22,5:15:12.96:93,0,13	0/1:22,4:21:99:206,0,166	0/1:44,2:27:99:161,0,1066	0/0:9,0:7:12.03:0,12,485	0/1:15,1:7:99:129,0,131	1/1:8,8:9:21.07:648,21,0	0/1:8,1:4:13.98:93,0,14
chr10	17421597	.	AG	A	289.70	PASS	AB=0.985;AC=17;AF=0.354;AN=48;BaseQRankSum=7.140;DP=755;DS;FS=5.320;HRun=3;HaplotypeScore=114.6727;InbreedingCoeff=-0.1300;MQ=31.27;MQ0=182;MQRankSum=-2.491;QD=0.74;ReadPosRankSum=1.658;VQSLOD=-0.2759;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:20:10.64:0,11,195	./.	./.	./.	0/1:10,0:7:0:0,0,0	0/1:16,0:13:14.94:15,0,195	0/0:37,0:31:26.27:0,26,604	0/0:41,0:4:6.02:0,6,86	0/0:13,0:12:27.08:0,27,372	0/1:15,0:5:15.72:16,0,33	./.	0/1:59,4:33:78.68:79,0,345	0/1:37,2:14:6.47:6,0,153	0/1:36,4:23:99:115,0,163	0/1:30,0:27:7.81:8,0,549	0/1:34,0:25:58.09:58,0,422	0/0:22,1:16:2.74:0,3,70	0/1:43,0:33:35.70:36,0,684	0/0:36,1:13:33.09:0,33,458	0/1:25,0:16:9.46:9,0,35	0/0:94,12:54:20.76:0,21,288	0/1:22,0:13:3.29:3,0,11	0/1:18,0:15:5.25:5,0,53	0/0:35,2:19:11.31:0,11,286	0/0:11,0:9:15.04:0,15,199	0/1:12,0:3:3.24:3,0,31	1/1:15,2:8:17.69:66,18,0	1/1:8,0:3:2.50:9,2,0
chr10	17421623	.	AG	A	1186.71	PASS	AB=0.851;AC=24;AF=0.462;AN=52;BaseQRankSum=8.794;DP=602;FS=2.011;HRun=3;HaplotypeScore=86.5849;InbreedingCoeff=0.2364;MQ=37.32;MQ0=115;MQRankSum=-9.372;QD=3.01;ReadPosRankSum=0.640;VQSLOD=0.1004;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:17,2:6:26.91:59,0,27	1/1:3,0:2:3.01:36,3,0	0/1:7,1:7:16.17:16,0,217	0/0:8,0:3:6.02:0,6,75	0/1:10,1:3:0:0,0,0	0/0:17,0:15:24.08:0,24,343	0/0:34,0:32:72.21:0,72,999	0/0:23,1:5:6.02:0,6,85	0/0:13,0:12:27.08:0,27,366	0/0:2,0:2:3.01:0,3,43	./.	0/1:45,17:30:19.23:384,0,19	0/1:23,9:10:0.08:94,0,0	0/1:33,15:23:49.42:230,0,49	0/0:25,0:22:48.15:0,48,673	0/0:26,0:19:42.14:0,42,603	1/1:15,2:12:3:25,3,0	0/0:39,0:29:69.20:0,69,952	1/1:24,3:10:5.94:182,6,0	1/1:9,1:5:3:25,3,0	0/1:71,14:41:55.88:56,0,101	1/1:8,3:3:2.98:25,3,0	1/1:9,0:7:2.89:25,3,0	0/1:29,3:14:4.09:86,0,4	0/0:16,0:13:23.79:0,24,345	1/1:4,1:1:2.99:24,3,0	1/1:12,3:7:3.43:77,3,0	./.
chr10	17421626	.	GA	G	1673.57	PASS	AB=0.747;AC=22;AF=0.423;AN=52;BaseQRankSum=10.222;DP=614;FS=0.555;HRun=1;HaplotypeScore=80.0274;InbreedingCoeff=0.3105;MQ=37.15;MQ0=114;MQRankSum=-9.189;QD=4.19;ReadPosRankSum=-0.036;VQSLOD=0.1081;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:17,7:10:65.06:107,0,65	1/1:3,0:2:2.94:18,3,0	0/0:10,0:7:11.34:0,11,275	0/0:8,0:3:6.02:0,6,96	0/1:8,4:3:0:0,0,0	0/0:20,0:19:27.08:0,27,406	0/0:33,0:33:72.25:0,72,1144	0/0:21,0:4:11.97:0,12,116	0/0:12,0:11:27.02:0,27,400	0/0:3,0:2:6:0,6,71	./.	0/1:48,21:32:41.05:484,0,41	0/1:24,9:13:1.41:136,0,1	0/1:40,10:22:22.82:295,0,23	0/0:23,0:20:51.13:0,51,745	0/0:27,0:20:45.14:0,45,695	0/1:6,14:14:28.96:33,0,29	0/0:38,0:28:66.19:0,66,1027	1/1:18,7:9:22.05:215,22,0	1/1:4,3:4:3.01:42,3,0	0/1:53,31:42:56.98:57,0,92	1/1:12,3:4:3.01:42,3,0	1/1:2,3:3:5.97:62,6,0	1/1:16,14:13:14.53:172,15,0	0/0:17,0:15:30.02:0,30,432	0/1:4,2:2:16.97:36,0,17	1/1:8,8:6:13.22:145,13,0	./.
chr10	17421652	.	G	GA	299.96	PASS	AB=1.000;AC=4;AF=0.071;AN=56;BaseQRankSum=-0.161;DP=976;FS=12.687;HRun=0;HaplotypeScore=123.7080;InbreedingCoeff=0.2640;MQ=30.23;MQ0=282;MQRankSum=-3.286;QD=3.23;ReadPosRankSum=-1.308;VQSLOD=2.4814;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:24:35.02:0,35,388	0/0:10,0:5:9.03:0,9,123	0/0:10,0:6:18.04:0,18,220	0/0:7,0:2:5.85:0,6,34	0/0:19,0:4:2.95:0,3,42	0/0:23,0:19:27.09:0,27,377	0/0:26,0:23:48.16:0,48,671	0/1:57,0:9:19.63:20,0,179	1/1:0,14:13:24.08:382,24,0	0/1:22,0:6:5.36:5,0,121	0/0:13,0:7:3.01:0,3,42	0/0:102,3:40:50.33:0,50,1102	0/0:66,0:36:65.87:0,66,750	0/0:77,5:39:18.26:0,18,756	0/0:19,0:18:51.16:0,51,698	0/0:19,0:19:51.15:0,51,694	0/0:38,1:22:37.96:0,38,538	0/0:24,0:21:60.12:0,60,837	0/0:50,0:9:20.86:0,21,223	0/0:14,0:7:5.38:0,5,50	0/0:124,2:72:10.89:0,11,423	0/0:27,0:10:2.94:0,3,18	0/0:17,0:5:2.07:0,2,7	0/0:55,1:32:6.95:0,7,440	0/0:19,0:14:30.06:0,30,381	0/0:26,0:8:18.05:0,18,229	0/0:28,0:16:40.16:0,40,460	0/0:8,0:2:5.99:0,6,64
chr10	17422503	.	AGGAGGAGCAG	A	226.70	PASS	AB=0.953;AC=6;AF=0.120;AN=50;BaseQRankSum=3.852;DP=786;FS=10.798;HRun=0;HaplotypeScore=100.9017;InbreedingCoeff=-0.0152;MQ=31.63;MQ0=217;MQRankSum=-3.154;QD=1.62;ReadPosRankSum=0.059;VQSLOD=1.3913;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:36,2:11:81.37:81,0,303	1/1:15,0:8:0.47:1,0,0	0/0:10,0:2:6.02:0,6,216	0/0:13,0:3:9.03:0,9,408	0/0:14,3:10:2.57:0,3,158	0/0:21,0:20:39.09:0,39,1878	0/0:27,0:27:51.18:0,51,2630	0/0:40,0:2:3.01:0,3,71	0/0:26,0:26:69.24:0,69,3480	0/0:19,0:10:21.07:0,21,781	./.	0/0:68,0:25:24.08:0,24,1038	0/0:33,0:17:17.43:0,17,644	0/0:39,0:14:15.31:0,15,494	0/0:30,0:27:72.20:0,72,3538	0/0:19,0:19:51.13:0,51,2432	0/1:37,2:28:99:160,0,1182	0/0:22,0:21:57.20:0,57,2856	0/0:38,0:3:6.02:0,6,181	./.	0/0:73,0:36:15.64:0,16,656	0/0:23,0:9:15.01:0,15,544	0/1:28,0:14:2.61:3,0,85	0/0:39,0:20:18.06:0,18,876	0/0:10,0:10:3.01:0,3,147	0/0:34,0:17:45.15:0,45,1567	0/1:18,2:10:80.94:81,0,582	./.
chr10	17422795	.	G	GA	2573.44	PASS	AB=0.965;AC=15;AF=0.288;AN=52;BaseQRankSum=-3.755;DP=1133;FS=33.798;HRun=0;HaplotypeScore=166.6743;InbreedingCoeff=0.6683;MQ=36.34;MQ0=202;MQRankSum=0.976;QD=8.47;ReadPosRankSum=1.004;VQSLOD=1.8023;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:62,3:42:85.67:86,0,567	0/0:12,0:11:21.07:0,21,286	./.	./.	0/0:41,0:37:36:0,36,459	1/1:1,13:11:18.06:287,18,0	1/1:2,16:12:15.05:239,15,0	0/0:67,0:23:53.79:0,54,634	0/0:25,0:22:63.21:0,63,879	0/0:43,0:29:78.22:0,78,1058	0/0:16,0:13:29.86:0,30,338	0/0:81,0:54:99:0,107,1355	0/0:48,0:34:59.84:0,60,790	0/0:81,1:44:27.38:0,27,888	1/1:0,19:15:39.06:593,39,0	1/1:1,21:15:3.45:600,3,0	0/1:58,2:51:21.36:21,0,1399	1/1:0,24:20:48.16:766,48,0	0/0:37,0:20:54.45:0,54,692	0/0:31,0:17:20.94:0,21,266	0/0:132,2:95:99:0,166,2395	0/0:41,0:27:41.77:0,42,535	0/0:42,0:33:41.84:0,42,544	0/1:63,2:51:18.19:18,0,1053	1/1:6,11:9:9.03:143,9,0	0/0:39,0:29:81.27:0,81,1128	0/0:33,0:19:29.39:0,29,356	0/0:14,0:12:21.02:0,21,271
chr10	17422870	.	G	GA	664.35	PASS	AB=0.751;AC=13;AF=0.310;AN=42;BaseQRankSum=4.960;DP=180;FS=44.655;HRun=0;HaplotypeScore=47.1448;InbreedingCoeff=-0.0040;MQ=33.11;MQ0=18;MQRankSum=-5.112;QD=6.71;ReadPosRankSum=1.910;VQSLOD=1.5001;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	1/1:0,1:1:3.01:46,3,0	./.	./.	0/0:3,0:2:3.01:0,3,42	0/0:3,0:3:3.01:0,3,42	0/0:8,0:8:21.07:0,21,293	0/0:6,0:4:9.01:0,9,107	0/0:6,0:5:9.03:0,9,126	0/1:1,4:3:31.45:77,0,31	0/0:4,0:4:6.02:0,6,84	0/1:13,7:16:99:126,0,102	0/1:10,2:7:27.94:28,0,72	0/1:6,7:9:29.91:119,0,30	0/0:11,0:9:18.04:0,18,232	0/0:5,0:4:12.04:0,12,168	./.	0/0:6,0:6:15.05:0,15,210	1/1:4,3:2:6.02:89,6,0	0/0:1,1:1:3.01:0,3,42	0/1:18,2:14:24.97:25,0,82	0/0:5,0:5:2.84:0,3,42	./.	0/1:5,2:6:55.61:56,0,72	./.	0/1:3,1:4:53.59:54,0,72	1/1:0,9:9:12.04:181,12,0	./.
chr10	17424696	.	CTGTGTGTGTGTGTGTGTGTGTGTGTG	C	846.71	PASS	AB=1.000;AC=13;AF=0.283;AN=46;BaseQRankSum=3.862;DP=517;FS=19.080;HRun=0;HaplotypeScore=283.0784;InbreedingCoeff=0.6103;MQ=65.90;MQ0=22;MQRankSum=0.528;QD=6.37;ReadPosRankSum=-0.279;VQSLOD=1.0338;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:8,0:8:3.01:0,3,196	./.	0/0:31,0:26:6.02:0,6,244	0/0:14,0:13:24.08:0,24,1148	0/0:18,0:17:15.05:0,15,1172	0/0:18,0:17:13.29:0,13,771	0/0:30,0:27:1.72:0,2,4	./.	0/0:17,0:16:18.06:0,18,865	0/0:14,0:16:18.04:0,18,619	1/1:20,0:19:9.02:123,9,0	1/1:10,0:9:3.01:60,3,0	1/1:14,6:19:3.01:201,3,0	0/0:13,0:12:6.02:0,6,257	0/0:16,0:16:27.09:0,27,1459	0/0:25,0:25:24.50:0,24,1161	0/0:11,0:11:21.07:0,21,1471	0/1:15,0:13:1.12:16,0,1	./.	0/0:27,0:26:0.89:0,1,2	1/1:8,9:15:2.90:200,3,0	1/1:8,5:13:0.36:1,0,0	1/1:27,11:37:6.02:377,6,0	0/0:20,0:23:33.11:0,33,1909	0/0:21,0:20:18.06:0,18,807	0/0:16,0:16:24.08:0,24,1269	./.
chr10	17425728	.	ATT	A	12815.13	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=7.532;DP=713;FS=0.000;HRun=3;HaplotypeScore=100.2723;InbreedingCoeff=0.9996;MQ=90.77;MQ0=1;MQRankSum=-3.486;QD=40.81;ReadPosRankSum=5.369;VQSLOD=4.1663;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:56:99:0,169,3244	1/1:0,11:11:30.10:459,30,0	0/0:26,0:26:72.24:0,72,1314	0/0:29,0:29:80:0,80,1512	1/1:2,13:15:39.13:597,39,0	1/1:0,13:13:39.13:597,39,0	1/1:0,26:26:59.99:919,60,0	0/0:20,0:20:60.20:0,60,1129	0/0:25,0:25:75.26:0,75,1440	1/1:1,27:28:81.23:1172,81,0	1/1:0,9:9:24.08:367,24,0	0/0:29,0:29:87.28:0,87,1631	0/0:23,0:23:69.24:0,69,1332	0/0:36,0:36:99:0,105,2010	1/1:0,36:36:96.33:1470,96,0	1/1:0,20:20:48.16:735,48,0	1/1:1,25:26:69.23:1057,69,0	1/1:2,21:23:57.19:873,57,0	0/0:17,0:17:51.17:0,51,948	0/0:23,0:23:69.24:0,69,1333	0/0:45,0:45:99:0,135,2559	0/0:23,0:23:66.23:0,66,1266	0/0:21,0:21:63.19:0,63,1151	0/0:26,0:26:72.25:0,72,1378	1/1:0,31:31:84.29:1286,84,0	1/1:0,25:25:75.23:1122,75,0	1/1:0,27:27:74.99:1148,75,0	1/1:1,23:23:66.22:1011,66,0
chr10	17428058	.	T	TA	12909.98	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=19.961;DP=882;FS=0.000;HRun=1;HaplotypeScore=106.7806;InbreedingCoeff=0.9998;MQ=85.27;MQ0=1;MQRankSum=-3.303;QD=36.78;ReadPosRankSum=0.580;VQSLOD=4.6615;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,144,1869	0/0:9,0:9:27.08:0,27,336	0/0:27,0:27:72.20:0,72,881	0/0:35,0:34:74.93:0,75,923	0/0:19,0:19:57.16:0,57,712	1/1:1,27:28:69.17:1005,69,0	1/1:1,26:27:60.20:899,60,0	1/1:2,37:39:99:1553,105,0	0/0:29,0:29:87.27:0,87,1109	0/0:46,0:46:99:0,126,1605	0/0:24,0:24:69.21:0,69,881	0/0:37,0:37:99:0,105,1332	0/0:33,0:33:90.28:0,90,1153	0/0:41,0:41:99:0,123,1565	1/1:2,37:39:87.18:1250,87,0	1/1:5,49:54:99:1824,123,0	0/0:29,0:29:87.27:0,87,1115	1/1:2,29:31:87.29:1301,87,0	1/1:0,19:19:54.17:784,54,0	1/1:1,25:26:78.09:1083,78,0	1/1:2,55:57:99:1954,132,0	0/0:23,0:23:55.50:0,55,692	0/0:23,0:23:66.21:0,66,856	0/0:27,0:27:81.20:0,81,991	1/1:0,30:29:84.28:1258,84,0	0/0:33,0:33:93.29:0,93,1195	0/0:30,0:30:90.23:0,90,1099	0/0:18,0:18:54.13:0,54,668
chr10	17428254	.	TA	T	9582.17	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=15.906;DP=866;FS=0.273;HRun=2;HaplotypeScore=88.9055;InbreedingCoeff=0.9997;MQ=81.07;MQ0=0;MQRankSum=-7.720;QD=36.16;ReadPosRankSum=6.129;VQSLOD=4.7802;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,56:56:99:2026,157,0	0/0:9,0:9:27.09:0,27,405	0/0:22,0:22:57.19:0,57,851	0/0:26,0:26:75.22:0,75,1072	0/0:15,0:15:42.13:0,42,608	0/0:23,0:23:66.22:0,66,987	0/0:39,0:39:99:0,111,1664	0/0:30,0:30:90.29:0,90,1314	0/0:24,0:24:69.23:0,69,1034	0/0:39,0:39:99:0,117,1754	0/0:27,0:27:75.23:0,75,1084	1/1:0,47:47:99:1675,129,0	1/1:0,35:35:99:1363,105,0	1/1:1,41:42:99:1402,108,0	0/0:40,0:40:99:0,120,1781	0/0:29,0:29:87.29:0,87,1304	0/0:42,0:42:99:0,126,1844	0/0:23,0:23:66.22:0,66,986	0/0:23,0:23:63.19:0,63,921	0/0:28,0:28:63.20:0,63,924	0/0:78,0:78:99:0,232,3458	1/1:0,28:28:81.26:1052,81,0	1/1:2,19:21:54.18:701,54,0	1/1:0,36:36:99:1363,105,0	0/0:21,0:21:57.19:0,57,846	0/0:31,0:31:89.79:0,90,1328	0/0:22,0:22:63.18:0,63,920	0/0:10,0:10:30.10:0,30,450
chr10	17429947	.	T	TGC	22797.99	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-14.317;DP=693;FS=1.718;HRun=0;HaplotypeScore=85.3538;InbreedingCoeff=0.9916;MQ=90.13;MQ0=0;MQRankSum=-5.495;QD=49.13;ReadPosRankSum=2.453;VQSLOD=5.6715;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,40:41:93.10:1746,93,0	0/0:5,0:5:15.05:0,15,230	0/0:33,0:33:93.28:0,93,1347	0/0:22,0:22:54.18:0,54,816	0/0:15,0:15:45.15:0,45,689	1/1:2,21:23:48.16:926,48,0	1/1:1,38:39:99:2193,114,0	1/1:1,26:27:78.27:1500,78,0	0/0:33,0:33:93.32:0,93,1420	0/0:18,0:18:51.17:0,51,760	0/0:7,0:7:21.07:0,21,322	1/1:1,38:39:99:2084,108,0	1/1:1,18:19:51.17:959,51,0	1/1:2,22:25:69.23:1300,69,0	1/1:0,18:18:48.16:927,48,0	1/1:2,20:22:11.25:995,11,0	0/0:38,0:38:99:0,114,1744	1/1:0,30:30:84.29:1622,84,0	1/1:3,8:11:30.10:548,30,0	1/1:1,15:16:33.11:617,33,0	1/1:6,70:76:99:3758,199,0	1/1:1,12:13:32.97:625,33,0	1/1:2,10:12:26.93:511,27,0	1/1:1,35:36:84.29:1622,84,0	1/1:2,15:17:45.15:869,45,0	0/0:25,0:25:75.25:0,75,1143	0/0:17,0:17:51.16:0,51,757	0/0:16,0:16:45.15:0,45,689
chr10	17430145	.	CT	C	19372.20	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=1.797;DP=592;FS=27.027;HRun=2;HaplotypeScore=59.7203;InbreedingCoeff=0.9858;MQ=77.00;MQ0=0;MQRankSum=-5.590;QD=36.01;ReadPosRankSum=2.292;VQSLOD=2.8833;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,35:35:96.26:1226,96,0	1/1:1,5:6:15.05:195,15,0	0/0:14,0:14:39.08:0,39,499	0/0:15,0:15:42.14:0,42,616	1/1:0,25:25:72.23:934,72,0	1/1:0,15:15:45.15:584,45,0	1/1:0,35:35:96.31:1246,96,0	1/1:0,19:19:57.16:712,57,0	0/0:25,0:25:75.24:0,75,1104	1/1:0,23:23:66.21:856,66,0	1/1:1,9:10:24.04:292,24,0	1/1:0,29:29:81.26:1051,81,0	1/1:0,23:23:66.21:856,66,0	1/1:0,29:29:84.27:1090,84,0	1/1:0,20:20:57.19:740,57,0	1/1:0,22:22:63.20:818,63,0	1/1:0,17:17:45.15:584,45,0	1/1:0,22:22:63.20:815,63,0	1/1:0,24:24:72.21:908,72,0	1/1:0,10:10:24.08:312,24,0	1/1:1,58:59:99:2064,160,0	1/1:0,8:8:15.05:195,15,0	1/1:0,13:13:39.13:506,39,0	1/1:1,23:24:66.21:857,66,0	1/1:0,15:15:39.13:506,39,0	1/1:1,26:27:78.25:1012,78,0	1/1:0,19:19:57.19:740,57,0	1/1:0,9:9:21.07:273,21,0
chr10	17430411	.	A	AT	2375.92	PASS	AB=0.833;AC=16;AF=0.286;AN=56;BaseQRankSum=-7.658;DP=359;FS=28.378;HRun=11;HaplotypeScore=49.2955;InbreedingCoeff=0.7449;MQ=80.82;MQ0=5;MQRankSum=1.558;QD=18.00;ReadPosRankSum=-0.172;VQSLOD=2.3392;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:2,0:19:30.55:0,31,88	1/1:0,5:5:12.02:122,12,0	0/1:22,0:17:13.64:14,0,93	0/0:14,0:13:8.06:0,8,83	1/1:0,13:13:36.07:365,36,0	0/0:16,0:15:23.84:0,24,186	0/0:12,0:12:23.88:0,24,186	0/0:36,0:26:38.07:0,38,396	0/0:7,0:7:8.89:0,9,63	1/1:1,14:15:45.09:457,45,0	1/1:3,9:12:27.05:274,27,0	0/0:1,0:10:14.26:0,14,41	0/0:3,0:9:12.21:0,12,35	0/0:2,0:14:24.44:0,24,71	0/0:11,0:11:23.89:0,24,184	0/0:7,0:8:16.98:0,17,122	1/1:4,24:27:22.66:593,23,0	0/0:19,0:22:56.89:0,57,409	0/0:18,0:17:15.84:0,16,255	0/0:11,0:10:20.78:0,21,154	0/0:1,0:1:2.99:0,3,23	0/0:1,0:2:2.04:0,2,6	0/0:0,0:4:8.15:0,8,24	0/0:2,0:5:6.11:0,6,18	0/0:8,0:8:18.25:0,18,131	1/1:3,15:19:47.88:450,48,0	0/1:5,5:10:2.46:143,0,2	1/1:3,5:8:15.03:152,15,0
chr10	17430614	.	G	GTTT	2064.79	PASS	AB=0.958;AC=26;AF=0.464;AN=56;BaseQRankSum=6.190;DP=340;FS=4.485;HRun=7;HaplotypeScore=78.4201;InbreedingCoeff=0.6839;MQ=56.88;MQ0=6;MQRankSum=-6.712;QD=17.80;ReadPosRankSum=-2.460;VQSLOD=-0.0357;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,4:11:20.97:354,21,0	0/0:5,0:5:6.02:0,6,82	0/0:41,0:18:40.83:0,41,444	0/0:20,0:12:18.24:0,18,238	0/0:21,0:21:48.13:0,48,648	1/1:4,0:13:1.82:43,2,0	1/1:2,0:9:3.01:30,3,0	0/0:20,0:18:30.05:0,30,263	0/0:6,0:4:8.24:0,8,89	0/0:19,0:18:45.14:0,45,587	0/0:11,0:10:18.96:0,19,317	1/1:2,4:6:12.93:243,13,0	1/1:5,4:8:20.93:347,21,0	1/1:1,7:8:18.06:342,18,0	1/1:5,0:4:4.22:24,4,0	1/1:5,0:5:8.27:39,8,0	0/0:30,0:24:43.58:0,44,606	0/1:10,0:9:10.18:39,0,10	0/0:18,0:18:39.68:0,40,381	0/1:10,0:9:47.30:47,0,91	0/0:3,0:3:5.98:0,6,56	1/1:4,5:8:14.53:261,15,0	1/1:1,6:7:18.06:372,18,0	1/1:2,3:5:3.01:62,3,0	1/1:6,0:6:7.63:64,8,0	0/0:14,0:11:33.10:0,33,434	0/0:9,0:9:15.03:0,15,205	0/0:7,0:6:8.24:0,8,121
chr10	17430621	.	TGC	T	357.12	PASS	AB=0.963;AC=16;AF=0.286;AN=56;BaseQRankSum=4.555;DP=335;FS=2.536;HRun=0;HaplotypeScore=65.4740;InbreedingCoeff=0.2673;MQ=55.02;MQ0=12;MQRankSum=-4.529;QD=3.47;ReadPosRankSum=-3.026;VQSLOD=1.3084;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:12,0:10:10.75:11,0,39	0/0:3,1:4:8.92:0,9,102	0/0:39,0:16:12.46:0,12,362	0/0:20,0:10:19.66:0,20,253	0/0:19,0:19:56.50:0,57,762	0/1:8,2:9:0.93:60,0,1	1/1:7,0:6:5:26,5,0	0/0:16,1:15:8.03:0,8,229	0/0:6,0:4:9.03:0,9,128	0/0:20,0:19:53.84:0,54,742	0/0:12,0:9:27.08:0,27,371	0/1:8,0:8:0.19:43,0,0	0/0:10,0:8:15.15:0,15,82	0/0:9,0:8:11.26:0,11,45	1/1:5,1:5:10.87:53,11,0	1/1:6,0:6:4.70:55,5,0	0/0:29,0:23:35.50:0,35,600	0/1:11,1:9:47.20:107,0,47	0/0:18,0:16:14.84:0,15,177	0/1:11,0:9:24.80:33,0,25	0/1:3,0:3:0.12:0,0,16	0/1:10,0:8:0.69:1,0,23	0/1:7,0:7:0.57:1,0,13	0/1:4,0:4:17.86:22,0,18	0/1:6,1:7:0.49:97,0,0	0/0:15,0:12:36.10:0,36,484	0/0:9,0:8:14.79:0,15,214	0/0:5,0:4:4.84:0,5,122
chr10	17430629	.	T	TGC	571.27	PASS	AB=0.889;AC=8;AF=0.143;AN=56;BaseQRankSum=2.657;DP=356;FS=0.000;HRun=0;HaplotypeScore=67.2081;InbreedingCoeff=-0.1703;MQ=50.50;MQ0=33;MQRankSum=-2.311;QD=6.80;ReadPosRankSum=0.393;VQSLOD=2.9517;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:10:23.17:0,23,215	0/0:3,0:3:6.02:0,6,75	0/0:39,0:16:39.82:0,40,442	0/0:19,0:9:20.74:0,21,258	0/0:20,0:19:51.17:0,51,797	0/1:8,0:7:0.25:0,0,38	0/1:8,0:7:6.45:6,0,49	0/1:13,6:14:99:212,0,158	0/0:7,0:5:11.93:0,12,152	0/0:20,0:19:57.18:0,57,841	0/0:12,0:9:24.06:0,24,348	0/0:7,0:7:16.85:0,17,131	0/0:11,0:8:23.89:0,24,210	0/0:10,0:8:17.98:0,18,202	0/0:6,0:4:8.91:0,9,75	0/1:7,1:6:31.93:32,0,86	0/0:30,0:21:54.17:0,54,745	0/0:14,0:8:17.59:0,18,199	0/1:9,4:12:99:168,0,163	0/1:10,5:13:99:249,0,115	0/1:2,0:2:15.86:16,0,29	0/0:10,0:8:16.23:0,16,154	0/0:7,0:7:17.96:0,18,171	0/0:6,0:5:1.49:0,1,36	0/1:9,0:7:11.87:12,0,83	0/0:13,0:10:30.10:0,30,472	0/0:10,0:7:18.06:0,18,264	0/0:12,0:10:25.84:0,26,307
chr10	17431084	.	TTTTCTTTC	T	1074.53	PASS	AB=1.000;AC=21;AF=0.525;AN=40;BaseQRankSum=6.769;DP=505;FS=4.354;HRun=0;HaplotypeScore=168.4616;InbreedingCoeff=0.7411;MQ=63.22;MQ0=6;MQRankSum=-7.489;QD=5.78;ReadPosRankSum=-2.803;VQSLOD=2.2234;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:34,0:33:15.52:167,16,0	0/0:11,0:11:15.04:0,15,387	./.	0/1:15,0:7:0:0,0,0	0/0:26,0:26:39.09:0,39,1037	1/1:17,0:17:12.04:223,12,0	./.	./.	1/1:9,7:16:12.04:266,12,0	0/0:20,0:20:30.08:0,30,668	0/0:21,0:21:36.01:0,36,1002	1/1:19,0:19:3.48:56,3,0	1/1:14,0:14:3.01:56,3,0	1/1:13,0:12:0.47:1,0,0	1/1:14,0:14:9.03:167,9,0	1/1:14,0:14:6.02:112,6,0	0/0:33,0:33:48.12:0,48,1330	./.	./.	1/1:7,0:6:3.01:56,3,0	./.	./.	1/1:23,0:23:8.62:122,9,0	0/0:14,0:12:0.47:0,0,1	./.	0/0:30,0:29:27.08:0,27,783	0/0:22,0:22:33.09:0,33,919	0/0:23,0:23:27.09:0,27,903
chr10	17431110	.	TTCTTTCTTTCTTTCTTTCTTTCTTTC	T	4357.92	PASS	AB=1.000;AC=26;AF=0.464;AN=56;BaseQRankSum=2.807;DP=380;FS=4.313;HRun=0;HaplotypeScore=257.6525;InbreedingCoeff=0.4894;MQ=52.81;MQ0=9;MQRankSum=-5.034;QD=24.90;ReadPosRankSum=-4.878;VQSLOD=2.6978;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:28:99:101,0,743	0/0:9,0:9:27.08:0,27,2012	0/0:6,0:2:2.98:0,3,22	0/0:8,0:2:1.82:0,2,6	0/0:21,0:21:63.20:0,63,5069	1/1:4,4:8:21.07:924,21,0	1/1:10,0:10:29.70:313,30,0	1/1:13,0:10:27:299,27,0	0/0:17,0:15:36.12:0,36,2209	0/0:20,0:20:60.17:0,60,4312	0/0:17,0:17:48.14:0,48,4366	0/1:14,0:13:59.05:59,0,154	0/1:8,0:8:57.69:58,0,155	0/0:11,0:10:3.89:0,4,91	1/1:10,2:11:33.07:867,33,0	1/1:6,2:8:15.25:548,15,0	0/0:33,0:33:87.27:0,87,6602	1/1:11,0:11:23.02:239,23,0	1/1:5,0:5:12.03:178,12,0	1/1:4,1:4:12.04:343,12,0	1/1:3,1:4:9.02:95,9,0	0/1:10,0:10:8.83:9,0,167	0/1:14,0:13:99:107,0,153	0/1:15,0:12:25.08:25,0,125	1/1:9,0:9:18:193,18,0	0/0:21,0:20:60.19:0,60,3840	0/0:22,0:22:66.21:0,66,4922	0/0:20,0:20:60.21:0,60,4373
chr10	17431118	.	TTCTTTCTTTCTTTCTTTC	T	4708.54	PASS	AB=1.000;AC=29;AF=0.537;AN=54;BaseQRankSum=5.957;DP=364;FS=10.761;HRun=0;HaplotypeScore=190.5787;InbreedingCoeff=0.5898;MQ=46.79;MQ0=10;MQRankSum=-7.677;QD=24.40;ReadPosRankSum=-6.229;VQSLOD=0.5989;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:22,5:26:48.90:804,49,0	0/0:8,0:8:24.07:0,24,1289	./.	0/1:7,0:1:0:0,0,0	0/0:22,0:22:59.65:0,60,3345	1/1:8,0:8:18:576,18,0	1/1:7,0:7:13.84:64,14,0	0/1:17,0:14:25.31:84,0,25	0/0:17,0:15:36.12:0,36,1055	0/0:19,0:19:56.78:0,57,2557	0/0:15,0:15:45.14:0,45,2927	1/1:14,1:14:29.56:499,30,0	1/1:10,0:10:24.05:395,24,0	1/1:8,1:8:16.02:216,16,0	0/1:9,0:8:0.82:422,0,1	0/1:7,0:7:24.50:278,0,25	0/0:30,0:30:84.23:0,84,4282	0/1:10,0:10:13.12:99,0,13	0/1:7,0:7:12.92:36,0,13	1/1:9,0:8:8.07:157,8,0	1/1:4,0:4:8.06:35,8,0	1/1:9,1:9:18:211,18,0	1/1:14,2:15:27.97:561,28,0	1/1:16,0:13:25.78:271,26,0	0/1:5,0:4:0:0,0,0	0/0:17,0:16:45.14:0,45,2311	0/0:23,0:23:69.04:0,69,3222	0/0:17,0:17:51.15:0,51,2732
chr10	17431131	.	TC	T	773.93	PASS	AB=0.968;AC=30;AF=0.536;AN=56;BaseQRankSum=9.422;DP=372;FS=5.845;HRun=1;HaplotypeScore=79.0855;InbreedingCoeff=0.5404;MQ=51.26;MQ0=5;MQRankSum=-10.623;QD=4.03;ReadPosRankSum=-0.540;VQSLOD=0.0216;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:22:14.37:108,14,0	0/0:8,0:8:23.98:0,24,309	0/0:4,0:1:2.96:0,3,19	0/1:7,0:4:4.74:5,0,72	0/0:26,0:26:74.53:0,75,994	1/1:10,0:10:16.96:63,17,0	1/1:7,2:9:15.79:68,16,0	1/1:18,0:16:7.93:118,8,0	0/0:22,0:20:4.18:0,4,435	0/0:17,0:17:51.15:0,51,695	0/0:15,0:15:45.15:0,45,644	1/1:13,2:14:13.70:65,14,0	1/1:6,1:7:4.20:18,4,0	1/1:6,0:5:6.91:26,7,0	0/1:12,0:11:1.39:46,0,1	0/1:10,0:10:6.18:52,0,6	0/0:30,0:30:84.21:0,84,1169	0/1:8,1:9:9.29:52,0,9	0/1:9,1:10:4.25:75,0,4	1/1:15,0:14:20.74:111,21,0	1/1:6,0:6:8.78:32,9,0	0/1:8,0:7:4.46:4,0,10	1/1:8,1:9:7.20:41,7,0	1/1:11,0:9:13.97:72,14,0	1/1:6,0:5:2.66:11,3,0	0/0:14,0:13:34.52:0,35,517	0/0:28,0:28:84.24:0,84,1157	0/0:16,0:16:45.15:0,45,664
chr10	17431132	.	C	CT	1625.17	PASS	AB=0.864;AC=29;AF=0.518;AN=56;BaseQRankSum=5.470;DP=394;FS=5.844;HRun=3;HaplotypeScore=84.8117;InbreedingCoeff=0.4779;MQ=51.02;MQ0=5;MQRankSum=-8.287;QD=7.63;ReadPosRankSum=-1.648;VQSLOD=0.0589;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:17,5:22:4.31:186,0,4	0/0:8,0:8:21.06:0,21,250	0/0:4,0:1:2.80:0,3,13	0/1:8,0:4:8.26:8,0,62	0/0:26,0:26:65.96:0,66,763	1/1:7,6:13:6.10:62,6,0	1/1:3,7:10:17.91:170,18,0	1/1:11,9:18:14.39:291,14,0	0/0:22,0:20:43.61:0,44,456	0/0:17,0:17:45.06:0,45,508	0/0:15,0:15:35.92:0,36,393	1/1:6,9:14:11.52:104,12,0	0/1:8,3:11:6.25:40,0,6	1/1:3,4:6:6.01:62,6,0	0/1:9,3:11:12.98:77,0,13	1/1:4,7:11:3.31:164,3,0	0/0:30,0:30:75.52:0,76,838	0/1:8,2:10:3.66:93,0,4	0/1:10,1:11:3.77:58,0,4	1/1:13,3:15:9.48:89,9,0	1/1:3,3:6:8.88:93,9,0	0/1:8,1:8:5.77:42,0,6	1/1:6,5:10:8.05:69,8,0	1/1:1,12:11:15.03:156,15,0	1/1:4,4:7:6.43:51,6,0	0/0:14,0:13:33.10:0,33,394	0/0:29,0:29:80.92:0,81,940	0/0:16,0:16:45.14:0,45,538
chr10	17431135	.	TC	T	1953.32	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=6.238;DP=403;FS=17.579;HRun=1;HaplotypeScore=77.3339;InbreedingCoeff=0.8884;MQ=50.76;MQ0=5;MQRankSum=-9.569;QD=8.96;ReadPosRankSum=-2.281;VQSLOD=-0.5508;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:24,1:25:44.85:293,45,0	0/0:7,0:7:21.05:0,21,236	0/0:5,0:1:2.04:0,2,6	0/0:8,0:4:8.39:0,8,71	0/0:24,0:24:60.18:0,60,678	1/1:15,0:15:25.65:172,26,0	1/1:8,2:10:18.72:88,19,0	1/1:21,0:19:34.04:203,34,0	0/0:23,0:21:3.29:0,3,361	0/0:16,0:16:39.13:0,39,396	0/0:15,0:15:23.36:0,23,377	1/1:14,2:15:14.47:87,14,0	1/1:9,2:11:18.38:123,18,0	1/1:7,0:6:8.65:47,9,0	1/1:12,0:11:20.19:129,20,0	1/1:11,0:11:12.51:100,13,0	0/0:29,0:29:63.02:0,63,757	1/1:6,4:10:22.90:196,23,0	1/1:11,1:12:28.47:173,28,0	1/1:17,1:16:31.29:199,31,0	1/1:6,0:6:13.24:63,13,0	1/1:10,0:9:5.87:20,6,0	1/1:11,0:10:16.28:100,16,0	1/1:15,0:13:20.49:135,20,0	1/1:8,0:7:7.82:39,8,0	0/0:14,0:13:18.86:0,19,344	0/0:29,0:29:74.76:0,75,797	0/0:15,0:15:45.10:0,45,507
chr10	17431136	.	C	CT	1680.72	PASS	AB=0.966;AC=33;AF=0.589;AN=56;BaseQRankSum=4.578;DP=417;FS=15.542;HRun=10;HaplotypeScore=81.6307;InbreedingCoeff=0.5481;MQ=50.78;MQ0=5;MQRankSum=-7.975;QD=6.51;ReadPosRankSum=-2.701;VQSLOD=-0.0041;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:26:9.11:218,9,0	0/0:7,0:7:17.98:0,18,148	0/0:5,0:1:2.99:0,3,23	0/0:8,0:4:8.36:0,8,57	0/0:26,0:26:53.69:0,54,436	1/1:15,0:15:7.05:63,7,0	1/1:10,0:10:17.91:170,18,0	1/1:22,0:20:19.18:307,19,0	0/0:24,1:23:16.19:0,16,323	0/1:13,2:16:37.65:38,0,128	0/1:15,1:16:1.74:2,0,192	1/1:16,0:15:12.09:104,12,0	1/1:11,0:11:7.40:63,7,0	1/1:7,0:6:6.48:63,6,0	0/1:12,0:11:4.22:80,0,4	1/1:11,0:11:0.84:136,1,0	0/0:28,2:30:27.74:0,28,425	0/1:11,0:11:1.97:80,0,2	1/1:14,0:14:13.20:82,13,0	1/1:19,0:17:9.50:89,10,0	1/1:6,0:6:8.87:93,9,0	0/1:11,0:10:8.51:26,0,9	1/1:12,0:11:8.30:68,8,0	1/1:15,0:13:15.98:158,16,0	1/1:8,0:7:3.37:32,3,0	0/0:13,1:13:23.41:0,23,190	0/0:27,1:29:33.32:0,33,466	0/0:15,0:15:32.93:0,33,271
chr10	17431249	.	A	AT	8964.05	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=14.725;DP=479;FS=6.959;HRun=6;HaplotypeScore=85.6534;InbreedingCoeff=0.9590;MQ=62.14;MQ0=2;MQRankSum=-1.015;QD=27.84;ReadPosRankSum=1.252;VQSLOD=5.3415;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,37:38:90.18:1089,90,0	0/0:7,0:7:15.03:0,15,153	0/0:5,0:5:3.42:0,3,52	0/0:5,0:5:9.02:0,9,90	0/0:16,0:16:48.11:0,48,489	1/1:2,18:20:45.14:566,45,0	1/1:2,8:10:24.07:294,24,0	1/1:6,35:40:99:1327,111,0	0/0:16,0:16:45.10:0,45,459	0/0:14,0:14:36.08:0,36,367	0/0:11,0:11:24.04:0,24,239	1/1:7,23:29:66.20:816,66,0	1/1:4,12:16:39.01:454,39,0	1/1:6,15:20:48.09:581,48,0	1/1:4,14:18:39.04:470,39,0	1/1:0,13:13:36.07:435,36,0	0/0:31,0:31:87.15:0,87,877	1/1:3,24:25:60.19:749,60,0	1/1:5,13:18:41.96:492,42,0	1/1:3,9:12:27.02:320,27,0	1/1:1,7:8:21.01:245,21,0	1/1:5,4:8:12.04:149,12,0	1/1:2,6:8:20.98:241,21,0	1/1:4,13:17:36.06:434,36,0	1/1:2,12:12:24.08:302,24,0	0/0:20,0:20:54.12:0,54,551	0/0:21,0:21:57.13:0,57,581	0/0:11,0:11:33.07:0,33,336
chr10	17431756	.	TGCCA	T	6271.23	PASS	AB=0.944;AC=21;AF=0.375;AN=56;BaseQRankSum=12.035;DP=490;FS=28.581;HRun=0;HaplotypeScore=83.7181;InbreedingCoeff=0.8776;MQ=84.63;MQ0=0;MQRankSum=-4.878;QD=28.38;ReadPosRankSum=1.125;VQSLOD=2.7146;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:54.19:0,54,1364	0/0:2,0:2:6.02:0,6,148	0/0:23,0:23:42.14:0,42,939	0/0:16,0:16:30.01:0,30,666	0/0:18,0:18:48.16:0,48,1209	1/1:6,13:19:30.02:455,30,0	1/1:6,23:30:57.06:875,57,0	1/1:11,16:27:42.13:681,42,0	0/0:14,0:14:39.13:0,39,984	0/0:9,0:9:18.06:0,18,455	0/0:4,0:4:9.03:0,9,206	0/0:23,0:23:63.20:0,63,1514	0/0:17,0:17:45.15:0,45,1096	0/0:17,0:17:45.15:0,45,1111	1/1:2,20:21:54.18:933,54,0	1/1:3,19:21:54.11:867,54,0	0/0:32,0:32:75.26:0,75,1808	1/1:5,22:27:54.18:933,54,0	1/1:2,6:8:21.07:362,21,0	1/1:0,9:9:18.02:279,18,0	1/1:7,23:30:42.29:661,42,0	0/0:14,0:14:33.11:0,33,835	0/0:10,0:10:18.06:0,18,407	0/0:30,0:30:72.25:0,72,1818	1/1:1,9:10:17.93:215,18,0	0/0:15,0:15:30.09:0,30,710	0/1:16,1:17:9.73:10,0,891	0/0:1,0:1:3.01:0,3,76
chr10	17432684	.	A	AAAAT	650.73	PASS	AC=2;AF=0.045;AN=44;BaseQRankSum=-4.362;DP=264;FS=3.177;HRun=0;HaplotypeScore=44.2602;InbreedingCoeff=0.1368;MQ=57.05;MQ0=4;MQRankSum=-0.553;QD=26.03;ReadPosRankSum=2.054;VQSLOD=3.1279;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:21.02:0,21,195	0/0:4,0:4:3.01:0,3,46	./.	./.	0/0:13,0:13:3:0,3,25	0/0:11,0:11:21.07:0,21,323	./.	0/0:37,0:36:5.93:0,6,40	./.	0/0:7,0:7:3.01:0,3,45	0/0:5,0:5:2.66:0,3,24	0/0:7,0:7:3:0,3,28	0/0:6,0:6:3:0,3,28	0/0:5,0:5:3:0,3,28	0/0:9,0:9:3.01:0,3,40	0/0:4,0:4:3.01:0,3,46	0/0:18,0:18:30.08:0,30,419	1/1:12,12:25:33.11:740,33,0	0/0:13,0:12:12.03:0,12,165	0/0:1,0:1:3.01:0,3,46	0/0:2,0:2:3.01:0,3,46	./.	0/0:11,0:11:2.29:0,2,27	0/0:3,0:3:3:0,3,28	0/0:6,0:6:3.01:0,3,46	0/0:11,0:11:9.02:0,9,120	./.	0/0:10,0:10:9.03:0,9,138
chr10	17433687	.	C	CTG	39986.49	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-10.985;DP=899;FS=0.373;HRun=0;HaplotypeScore=97.4439;InbreedingCoeff=0.9784;MQ=84.39;MQ0=9;MQRankSum=-10.027;QD=51.26;ReadPosRankSum=8.364;VQSLOD=5.2574;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,57:62:99:2912,133,0	1/1:0,17:17:42.14:850,42,0	0/0:35,0:34:99:0,99,1551	0/0:50,0:49:99:0,135,1899	1/1:0,26:27:72.25:1451,72,0	1/1:0,23:24:66.23:1339,66,0	1/1:0,29:29:75.26:1513,75,0	1/1:2,31:32:93.31:1836,93,0	0/0:34,0:34:93.25:0,93,1437	1/1:0,31:32:96.31:1879,96,0	1/1:0,8:6:12.04:243,12,0	1/1:0,34:31:87.30:1762,87,0	1/1:1,43:43:99:2121,105,0	1/1:0,33:30:84.29:1699,84,0	1/1:2,45:44:99:2429,120,0	1/1:0,49:48:99:2491,123,0	1/1:0,41:41:99:2001,99,0	1/1:0,20:20:48.15:973,48,0	1/1:1,21:22:63.17:1147,63,0	1/1:0,23:24:63.22:1279,63,0	1/1:1,58:58:99:2921,144,0	1/1:0,17:17:51.18:1035,51,0	1/1:0,25:25:57.20:1157,57,0	1/1:1,39:40:99:2116,105,0	1/1:0,15:15:45.15:914,45,0	1/1:1,34:37:99:2043,108,0	1/1:1,30:32:81.28:1633,81,0	1/1:0,4:4:12.04:244,12,0
chr10	17437280	.	GGGCTGT	G	6977.44	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=13.326;DP=562;FS=2.492;HRun=0;HaplotypeScore=124.6718;InbreedingCoeff=0.9563;MQ=79.34;MQ0=0;MQRankSum=-15.185;QD=55.82;ReadPosRankSum=3.724;VQSLOD=4.9531;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,21:23:63.22:1532,63,0	0/0:7,0:7:21.07:0,21,758	0/0:13,0:13:36.12:0,36,1092	0/0:19,0:19:57.16:0,57,1688	0/0:15,0:15:42.14:0,42,1484	0/0:15,0:15:39.13:0,39,1426	0/0:29,0:29:87.28:0,87,3094	0/0:26,0:26:78.26:0,78,2667	0/0:32,0:32:93.32:0,93,3353	0/0:19,0:19:54.19:0,54,1888	0/0:8,0:8:21.07:0,21,652	1/1:1,29:31:78.24:1918,78,0	1/1:2,18:20:39.13:955,39,0	1/1:0,19:19:54.19:1325,54,0	0/0:30,0:30:90.31:0,90,3276	0/0:18,0:18:54.19:0,54,1965	0/0:40,0:40:99:0,120,4184	0/0:39,0:39:99:0,114,4066	0/0:23,0:23:66.23:0,66,2112	0/0:6,0:6:15.04:0,15,415	0/0:52,0:52:99:0,147,5145	1/1:2,4:6:6.02:148,6,0	1/1:4,3:7:6.02:145,6,0	1/1:1,18:19:39.13:955,39,0	0/0:14,0:14:42.14:0,42,1527	0/0:12,0:12:36.12:0,36,1267	0/0:12,0:12:36.12:0,36,1318	0/0:8,0:8:24.08:0,24,877
chr10	17438682	.	ATGCAGCAGTTGGTGACC	A	14866.09	PASS	AB=0.550;AC=13;AF=0.232;AN=56;BaseQRankSum=15.664;DP=694;FS=2.874;HRun=0;HaplotypeScore=327.2816;InbreedingCoeff=0.8892;MQ=82.87;MQ0=0;MQRankSum=-15.904;QD=94.09;ReadPosRankSum=2.566;VQSLOD=4.2869;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,25:40:51.13:2403,51,0	0/0:12,0:12:36.12:0,36,3007	0/0:24,0:24:60.21:0,60,3438	0/0:21,0:21:54.16:0,54,2964	0/0:20,0:20:57.20:0,57,4538	0/0:25,0:25:75.26:0,75,5447	0/0:35,0:35:99:0,102,8067	0/0:22,0:22:66.22:0,66,3760	0/0:20,0:20:57.20:0,57,4414	0/0:28,0:28:84.29:0,84,6608	0/0:20,0:20:60.21:0,60,4699	1/1:5,20:25:57.20:2830,57,0	1/1:4,15:19:42.14:2085,42,0	1/1:3,17:20:48.16:2383,48,0	0/0:37,0:37:99:0,108,8288	0/0:21,0:21:60.21:0,60,4992	0/0:36,0:35:99:0,108,8075	0/0:33,0:33:96.31:0,96,7253	0/0:25,0:25:72.25:0,72,4478	0/0:29,0:29:84.29:0,84,5868	0/0:46,0:45:99:0,138,10003	1/1:2,12:14:33.11:1631,33,0	1/1:6,12:18:36.12:1787,36,0	0/1:4,18:22:99:1748,0,212	0/0:21,0:21:60.16:0,60,3695	0/0:34,0:34:99:0,102,7746	0/0:24,0:24:69.24:0,69,5347	0/0:3,0:3:9.03:0,9,753
chr10	17439087	.	G	GT	12039.23	PASS	AB=1.000;AC=35;AF=0.625;AN=56;BaseQRankSum=-1.696;DP=623;FS=1.426;HRun=4;HaplotypeScore=79.0014;InbreedingCoeff=0.9177;MQ=66.90;MQ0=9;MQRankSum=-2.740;QD=32.10;ReadPosRankSum=-0.915;VQSLOD=4.9518;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,32:38:99:1414,108,0	0/0:6,0:6:18.04:0,18,193	0/0:37,0:18:24.30:0,24,320	0/1:39,0:10:43.10:43,0,46	0/0:25,0:25:75.21:0,75,849	1/1:0,15:15:36.12:493,36,0	1/1:2,21:23:60.20:821,60,0	1/1:8,20:28:84.27:1130,84,0	0/0:20,0:20:60.14:0,60,659	0/0:36,0:36:96.26:0,96,1079	0/0:25,0:25:69.19:0,69,778	1/1:7,21:27:75.24:992,75,0	1/1:2,16:18:54.18:736,54,0	1/1:1,18:19:57.10:747,57,0	1/1:2,21:23:54.18:738,54,0	1/1:1,12:13:36.12:492,36,0	0/0:26,0:26:69.19:0,69,782	1/1:0,15:15:39.13:534,39,0	1/1:6,11:17:36.12:491,36,0	1/1:3,30:33:96.30:1279,96,0	1/1:4,4:7:12.04:164,12,0	1/1:2,10:12:36.11:477,36,0	1/1:1,11:12:33.11:450,33,0	1/1:3,10:13:30.06:387,30,0	1/1:2,19:21:47.08:651,47,0	0/0:27,0:27:72.17:0,72,796	0/0:27,0:26:75.17:0,75,833	0/0:19,0:19:57.16:0,57,646
chr10	17439108	.	TA	T	3694.31	PASS	AB=0.979;AC=24;AF=0.429;AN=56;BaseQRankSum=12.184;DP=588;FS=10.432;HRun=11;HaplotypeScore=96.8017;InbreedingCoeff=0.8506;MQ=65.12;MQ0=4;MQRankSum=-8.232;QD=13.94;ReadPosRankSum=-1.396;VQSLOD=2.5091;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,23:34:53.87:440,54,0	0/0:5,0:5:15.04:0,15,159	0/1:25,0:11:5.92:11,0,6	0/0:32,0:8:8.02:0,8,54	0/0:26,2:28:47.54:0,48,707	0/0:17,0:17:48.11:0,48,505	0/0:21,0:21:48.08:0,48,495	1/1:3,15:20:27.09:356,27,0	0/0:20,2:22:10.84:0,11,511	0/0:32,0:32:63.16:0,63,671	0/0:22,2:24:38.49:0,38,604	1/1:7,24:30:65.84:538,66,0	1/1:4,14:18:17.82:296,18,0	1/1:5,15:20:44.08:368,44,0	0/0:18,1:19:17.29:0,17,391	0/0:12,1:13:14.47:0,14,359	0/0:28,0:28:75.08:0,75,800	0/0:15,2:17:17.42:0,17,372	1/1:4,15:19:41.94:345,42,0	1/1:6,27:33:57.52:619,58,0	1/1:4,4:8:11.96:98,12,0	1/1:0,10:10:29.97:246,30,0	1/1:0,11:11:23.57:196,24,0	1/1:3,9:12:20.95:172,21,0	0/1:22,1:23:9.44:9,0,420	0/0:25,0:25:63.14:0,63,663	0/0:26,0:27:69:0,69,711	0/0:13,0:13:39.03:0,39,387
chr10	17440280	.	GGAATGAAT	G	4666.14	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=12.004;DP=696;FS=1.059;HRun=0;HaplotypeScore=187.1979;InbreedingCoeff=0.8993;MQ=74.26;MQ0=0;MQRankSum=-12.111;QD=19.69;ReadPosRankSum=-2.485;VQSLOD=4.0994;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,111,4265	0/0:11,0:11:27.09:0,27,1112	0/0:28,0:25:18.06:0,18,614	0/0:24,0:21:12.04:0,12,413	0/0:22,0:22:42.14:0,42,1638	1/1:6,14:20:30.10:742,30,0	1/1:9,7:16:12.04:304,12,0	1/1:23,1:24:2.71:75,3,0	0/0:23,0:23:51.16:0,51,2006	0/0:28,0:28:57.67:0,58,2226	0/0:13,0:13:24.08:0,24,921	0/0:20,0:20:42.13:0,42,1484	0/0:29,0:30:78.25:0,78,3054	0/0:32,0:32:54.19:0,54,2225	1/1:12,13:25:36.08:857,36,0	1/1:7,10:17:21.07:533,21,0	0/0:42,0:42:90.28:0,90,3494	1/1:14,2:16:3.01:76,3,0	1/1:19,12:31:33.06:802,33,0	1/1:15,14:29:6.27:328,6,0	1/1:22,11:33:5.08:256,5,0	0/0:19,0:19:36.12:0,36,1476	0/0:20,0:20:45.14:0,45,1721	0/0:31,0:31:63.22:0,63,2510	1/1:8,18:26:27.10:693,27,0	0/0:25,0:25:54.19:0,54,2023	0/0:23,0:23:51.18:0,51,2088	0/0:17,0:17:45.15:0,45,1681
chr10	17441382	.	CT	C	1097.53	PASS	AB=0.822;AC=19;AF=0.452;AN=42;BaseQRankSum=0.445;DP=321;FS=15.935;HRun=15;HaplotypeScore=48.3981;InbreedingCoeff=0.5475;MQ=68.61;MQ0=7;MQRankSum=-0.147;QD=6.90;ReadPosRankSum=2.791;VQSLOD=0.9616;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,1:31:18.53:0,19,303	1/1:2,2:4:2.95:19,3,0	0/0:8,0:7:2.84:0,3,14	0/0:9,0:9:0.70:0,1,18	1/1:5,14:19:8.95:178,9,0	./.	./.	./.	0/1:7,1:8:1.36:1,0,99	1/1:2,8:11:25.66:159,26,0	1/1:7,8:14:17.45:129,17,0	0/0:14,0:14:32.62:0,33,254	0/0:19,0:19:41.75:0,42,328	0/1:18,2:20:9.44:9,0,143	0/0:9,0:9:0:0,0,0	./.	1/1:10,14:23:29.54:192,30,0	./.	./.	0/0:9,0:9:0.47:0,0,1	./.	0/1:0,1:2:8.31:13,0,8	0/0:10,0:10:17.82:0,18,142	0/0:5,0:5:9:0,9,79	0/0:6,0:6:0.47:0,0,1	1/1:12,10:20:25.81:155,26,0	1/1:6,17:24:42.88:274,43,0	1/1:4,6:10:17.55:115,18,0
chr10	17441539	.	CG	C	578.45	PASS	AB=0.760;AC=6;AF=0.107;AN=56;BaseQRankSum=8.244;DP=584;FS=0.000;HRun=3;HaplotypeScore=76.2561;InbreedingCoeff=-0.1591;MQ=47.56;MQ0=48;MQRankSum=-7.521;QD=6.81;ReadPosRankSum=-3.416;VQSLOD=-0.6305;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:42:99:0,111,1573	0/0:9,0:7:15.05:0,15,211	0/0:28,0:5:4.11:0,4,46	0/0:48,0:8:24.03:0,24,291	0/0:29,0:26:63.18:0,63,884	0/1:11,1:10:10.05:10,0,317	0/1:6,2:4:62.20:62,0,74	0/0:6,0:4:3.01:0,3,43	0/0:19,0:18:48.16:0,48,690	0/0:20,0:20:57.18:0,57,804	0/0:25,0:24:48.16:0,48,688	0/0:24,0:23:54.17:0,54,758	0/0:21,0:19:48.14:0,48,669	0/0:23,0:19:42.13:0,42,586	0/1:6,8:14:95.87:264,0,96	0/1:4,2:6:59.20:59,0,113	0/0:46,0:41:99:0,105,1510	0/1:12,9:18:99:255,0,216	0/0:9,0:5:5.98:0,6,84	0/0:5,1:5:6.02:0,6,86	0/1:16,8:19:48.63:49,0,237	0/0:12,0:11:21.07:0,21,302	0/0:20,1:19:2.03:0,2,455	0/0:40,1:37:81.27:0,81,1164	0/0:2,2:4:3.01:0,3,43	0/0:26,0:24:60.20:0,60,854	0/0:24,0:22:66.20:0,66,905	0/0:12,0:10:30.10:0,30,432
chr10	17441571	.	GC	G	2710.07	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=12.456;DP=516;FS=4.733;HRun=5;HaplotypeScore=85.1111;InbreedingCoeff=0.9724;MQ=65.00;MQ0=9;MQRankSum=-7.594;QD=20.53;ReadPosRankSum=-3.019;VQSLOD=2.4351;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:37:94.19:0,94,1270	0/0:2,0:2:6.02:0,6,82	0/0:19,1:14:26.56:0,27,479	0/0:31,0:20:56.92:0,57,731	0/0:25,0:25:51.17:0,51,697	1/1:4,6:10:18.05:204,18,0	1/1:2,12:13:24.54:273,25,0	1/1:2,6:7:15.04:170,15,0	0/0:22,0:20:54.18:0,54,739	0/0:20,0:20:60.17:0,60,784	0/0:15,0:15:33.10:0,33,436	0/0:22,0:22:51.15:0,51,666	0/0:20,0:19:48.16:0,48,657	0/0:13,0:12:24.07:0,24,312	1/1:2,15:17:45.13:510,45,0	1/1:2,8:10:21.06:238,21,0	0/0:37,0:36:94.19:0,94,1274	1/1:5,14:18:40.93:447,41,0	1/1:4,9:10:27.08:306,27,0	1/1:1,10:11:21.06:238,21,0	1/1:9,11:16:27.08:306,27,0	0/0:10,0:9:27.08:0,27,353	0/0:16,1:17:11.16:0,11,535	0/0:32,0:29:75.25:0,75,1026	1/1:1,9:10:21.06:238,21,0	0/0:25,0:24:69.21:0,69,910	0/0:21,0:20:63.21:0,63,854	0/0:14,0:14:42.14:0,42,575
chr10	17441576	.	CG	C	956.53	PASS	AB=0.937;AC=14;AF=0.250;AN=56;BaseQRankSum=14.100;DP=520;FS=4.562;HRun=1;HaplotypeScore=89.3582;InbreedingCoeff=0.4992;MQ=69.58;MQ0=4;MQRankSum=-9.576;QD=7.19;ReadPosRankSum=0.216;VQSLOD=0.7784;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,2:36:87.85:0,88,1463	0/0:2,0:2:6.02:0,6,94	0/0:20,0:16:47.06:0,47,583	0/0:25,0:21:60.05:0,60,854	0/0:25,0:25:56.38:0,56,819	1/1:7,0:7:16.67:89,17,0	0/1:16,2:17:30.60:103,0,31	0/1:8,0:7:2.62:70,0,3	0/0:27,2:27:72.12:0,72,986	0/0:21,0:21:63.21:0,63,947	0/0:13,0:13:33.09:0,33,492	0/0:22,0:22:51.15:0,51,751	0/0:21,0:20:56.92:0,57,803	0/0:9,1:9:21.07:0,21,327	1/1:19,0:19:30.81:262,31,0	0/1:11,0:11:12.20:92,0,12	0/0:34,2:35:91.46:0,91,1478	1/1:17,1:17:7.99:186,8,0	0/1:10,2:10:0.25:99,0,0	0/1:11,0:11:29.02:55,0,29	0/1:16,3:16:41.08:89,0,41	0/0:10,1:10:27.08:0,27,390	0/0:16,0:16:31.99:0,32,653	0/0:30,2:30:84.20:0,84,1239	1/1:10,0:10:18.66:86,19,0	0/0:26,1:26:75.17:0,75,1060	0/0:22,0:21:66.21:0,66,1005	0/0:18,0:18:54.10:0,54,748
chr10	17442010	.	CT	C	2847.77	PASS	AC=48;AF=0.923;AN=52;BaseQRankSum=-2.071;DP=142;FS=26.994;HRun=2;HaplotypeScore=35.6419;InbreedingCoeff=0.2778;MQ=53.85;MQ0=25;MQRankSum=-0.016;QD=23.93;ReadPosRankSum=2.387;VQSLOD=1.8852;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,3:3:6.02:78,6,0	1/1:0,1:1:3.01:39,3,0	0/0:5,0:2:3.01:0,3,33	0/0:14,0:5:2.51:0,3,16	1/1:1,2:3:9.03:115,9,0	1/1:1,5:6:15.05:194,15,0	1/1:0,3:3:6.02:78,6,0	1/1:1,1:1:3.01:39,3,0	1/1:0,3:2:6.02:78,6,0	1/1:4,5:9:9.03:117,9,0	1/1:0,3:3:6.02:78,6,0	1/1:2,2:3:3.01:39,3,0	1/1:0,5:5:15.05:194,15,0	1/1:1,2:2:6.02:78,6,0	1/1:3,7:7:21.07:272,21,0	1/1:1,3:4:9.03:117,9,0	1/1:1,2:3:3.01:39,3,0	1/1:2,4:4:9.03:117,9,0	1/1:4,3:4:6.02:78,6,0	1/1:0,8:8:24.08:311,24,0	./.	1/1:1,5:5:9.03:116,9,0	1/1:1,5:5:12.04:155,12,0	./.	1/1:0,6:6:18.06:233,18,0	1/1:0,3:2:6.02:78,6,0	1/1:0,2:2:6.02:78,6,0	1/1:2,6:6:18.06:233,18,0
chr10	17442047	.	A	AG	456.04	PASS	AC=16;AF=0.800;AN=20;BaseQRankSum=2.100;DP=58;FS=0.000;HRun=0;HaplotypeScore=24.2230;InbreedingCoeff=0.2728;MQ=49.37;MQ0=40;MQRankSum=-2.282;QD=24.00;ReadPosRankSum=0.274;VQSLOD=4.3836;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:7,0:1:3:0,3,26	0/0:7,0:1:2.98:0,3,21	./.	./.	./.	./.	./.	1/1:1,2:2:3.01:48,3,0	./.	./.	1/1:0,1:1:3.01:47,3,0	./.	./.	./.	1/1:2,1:1:3.01:34,3,0	./.	./.	./.	./.	1/1:0,1:1:3.01:47,3,0	1/1:1,1:1:3.01:35,3,0	./.	./.	1/1:0,1:1:3.01:48,3,0	1/1:0,2:2:6.02:96,6,0	1/1:2,4:4:12.04:190,12,0
chr10	17442100	.	T	TG	168.56	PASS	AB=1.000;AC=13;AF=0.813;AN=16;BaseQRankSum=-1.286;DP=80;FS=2.363;HRun=1;HaplotypeScore=33.9099;MQ=64.85;MQ0=42;MQRankSum=-1.898;QD=6.02;ReadPosRankSum=1.898;VQSLOD=0.7508;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	1/1:0,1:1:3.01:45,3,0	0/1:18,0:3:7.55:8,0,32	0/0:25,0:5:11.06:0,11,112	./.	1/1:0,4:4:11.86:111,12,0	1/1:1,0:1:2.68:11,3,0	./.	./.	./.	./.	./.	./.	./.	1/1:0,1:1:3.01:38,3,0	./.	./.	./.	./.	./.	./.	./.	./.	./.	1/1:1,1:1:2.92:17,3,0	./.	1/1:1,0:1:3:26,3,0	./.
chr10	17442228	.	TA	T	993.72	PASS	AB=0.728;AC=30;AF=0.577;AN=52;BaseQRankSum=-0.510;DP=190;FS=5.261;HRun=13;HaplotypeScore=30.0871;InbreedingCoeff=0.6255;MQ=62.78;MQ0=14;MQRankSum=-1.410;QD=10.57;ReadPosRankSum=2.567;VQSLOD=2.1450;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,8:10:20.77:146,21,0	0/0:3,0:3:6.01:0,6,57	0/0:24,0:5:11.98:0,12,102	0/0:29,0:12:20.47:0,20,125	0/0:6,0:6:17.98:0,18,165	1/1:1,2:3:2.98:22,3,0	./.	1/1:2,9:11:25.50:169,26,0	0/0:1,0:1:3:0,3,29	0/0:7,0:6:9.01:0,9,88	0/0:4,0:4:8.91:0,9,74	0/1:0,4:5:2.46:50,0,2	1/1:1,4:5:8.95:65,9,0	1/1:1,1:2:2.94:18,3,0	1/1:3,3:5:5.10:60,5,0	1/1:2,4:6:11.92:87,12,0	0/1:8,1:8:6.88:7,0,97	1/1:1,4:6:8.95:66,9,0	1/1:3,2:3:8:50,8,0	1/1:2,2:3:5.96:44,6,0	./.	1/1:0,1:1:2.98:22,3,0	1/1:1,1:2:2.98:22,3,0	1/1:0,3:3:5.96:44,6,0	1/1:2,13:15:41.76:306,42,0	0/0:7,0:9:20.77:0,21,167	0/0:5,0:5:15.02:0,15,146	0/0:5,0:5:11.97:0,12,107
chr10	17442570	.	CCAGCAGCAGCAG	C	4015.56	PASS	AC=10;AF=0.200;AN=50;BaseQRankSum=6.740;DP=529;FS=8.783;HRun=0;HaplotypeScore=233.9666;InbreedingCoeff=0.7363;MQ=62.22;MQ0=0;MQRankSum=-8.575;QD=32.65;ReadPosRankSum=2.247;VQSLOD=2.0008;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:26,5:31:6.01:131,6,0	0/0:8,0:8:9.03:0,9,501	0/0:12,0:12:17.98:0,18,645	0/0:20,0:17:25.90:0,26,763	./.	0/0:11,0:11:12.04:0,12,385	0/0:38,0:38:27.54:0,28,946	0/0:16,0:15:18.06:0,18,765	0/0:37,0:37:96.30:0,96,5317	0/0:8,0:8:3.01:0,3,135	0/0:10,0:10:9.03:0,9,357	1/1:17,18:35:51.17:1782,51,0	1/1:8,17:25:39.13:1363,39,0	1/1:6,11:18:18.05:530,18,0	0/0:20,0:22:8.92:0,9,379	0/0:27,0:28:12.04:0,12,448	0/0:34,0:34:69.19:0,69,3599	0/0:17,0:21:27.56:0,28,1038	0/0:11,0:11:6.48:0,6,132	0/0:6,0:6:3.01:0,3,155	0/0:42,0:42:44.97:0,45,1726	1/1:9,5:14:5.76:209,6,0	./.	./.	0/0:13,0:12:6.02:0,6,140	0/0:12,0:11:3.01:0,3,91	0/0:19,0:19:36.10:0,36,1791	0/0:5,0:5:14.84:0,15,621
chr10	17442900	.	AG	A	7866.28	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=13.735;DP=712;FS=2.060;HRun=6;HaplotypeScore=69.9456;InbreedingCoeff=0.9992;MQ=86.80;MQ0=0;MQRankSum=-2.135;QD=28.09;ReadPosRankSum=1.777;VQSLOD=5.6521;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,129,1683	0/0:9,0:9:21.07:0,21,276	0/0:26,0:26:78.22:0,78,972	0/0:21,0:21:54.14:0,54,682	0/0:24,0:24:63.20:0,63,828	1/1:3,17:20:51.13:548,51,0	1/1:3,27:30:72.18:774,72,0	1/1:3,20:23:57.14:612,57,0	0/0:30,0:30:87.28:0,87,1142	0/0:22,0:22:57.17:0,57,735	0/0:21,0:21:51.16:0,51,655	0/0:27,0:27:75.24:0,75,986	0/0:22,0:22:57.19:0,57,750	0/0:28,0:28:75.24:0,75,986	1/1:2,25:27:72.18:774,72,0	1/1:3,23:26:63.16:677,63,0	0/0:39,0:39:99:0,105,1378	1/1:3,25:28:69.17:742,69,0	1/1:3,23:26:69.17:741,69,0	1/1:0,15:15:45.11:484,45,0	1/1:4,53:57:99:1677,156,0	0/0:19,0:19:45.15:0,45,592	0/0:19,0:19:48.10:0,48,597	0/0:24,0:24:72.23:0,72,947	1/1:1,27:28:78.20:838,78,0	0/0:26,0:26:75.24:0,75,984	0/0:21,0:21:63.20:0,63,823	0/0:10,0:10:27.09:0,27,355
chr10	17445141	.	GA	G	1955.64	PASS	AB=0.706;AC=19;AF=0.365;AN=52;BaseQRankSum=2.545;DP=379;FS=17.103;HRun=7;HaplotypeScore=63.0344;InbreedingCoeff=0.8224;MQ=41.25;MQ0=22;MQRankSum=-5.749;QD=14.82;ReadPosRankSum=3.080;VQSLOD=2.0726;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:23:35.96:0,36,400	0/0:8,0:7:5.99:0,6,59	./.	./.	0/0:23,0:22:39.04:0,39,455	1/1:3,6:8:12.03:122,12,0	1/1:5,5:7:12.02:120,12,0	1/1:2,10:11:30.07:306,30,0	0/0:10,0:10:18.02:0,18,209	0/0:14,0:11:21.07:0,21,262	0/0:14,0:13:30.09:0,30,360	0/0:13,0:12:15.05:0,15,189	0/0:11,0:10:24.06:0,24,287	0/0:14,0:13:30.53:0,31,350	1/1:12,4:13:0.78:129,1,0	1/1:3,9:12:21.04:214,21,0	0/0:29,0:24:56.97:0,57,648	0/1:7,5:9:19.74:133,0,20	1/1:2,13:14:36.55:366,37,0	1/1:3,9:12:30.06:305,30,0	1/1:7,12:18:21.04:214,21,0	0/0:14,0:11:23.97:0,24,280	0/0:15,0:14:11.96:0,12,150	0/0:14,0:11:15.04:0,15,178	1/1:2,13:15:24.05:244,24,0	0/0:16,0:14:33.02:0,33,380	0/0:19,0:18:41.96:0,42,476	0/0:6,0:3:6.01:0,6,62
chr10	17445156	.	AAAAAAAAAAAAAAG	A	1513.49	PASS	AB=0.909;AC=7;AF=0.125;AN=56;BaseQRankSum=4.252;DP=418;FS=6.261;HRun=0;HaplotypeScore=145.5679;InbreedingCoeff=0.7383;MQ=44.12;MQ0=20;MQRankSum=-3.464;QD=23.65;ReadPosRankSum=-0.325;VQSLOD=2.2909;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:28:48.11:0,48,1905	0/0:6,0:5:15.05:0,15,731	0/0:10,0:5:11.16:0,11,193	0/0:7,0:2:2.98:0,3,22	0/0:27,0:25:60.59:0,61,2741	0/0:9,0:7:24.08:0,24,870	0/0:11,0:9:21.07:0,21,623	1/1:6,14:20:50.88:856,51,0	0/0:8,0:8:18.02:0,18,907	0/0:18,0:16:42.47:0,42,1702	0/0:16,0:15:33.06:0,33,1404	0/0:19,0:18:15.05:0,15,670	0/0:7,0:6:18.02:0,18,443	0/0:13,0:12:27.09:0,27,1264	0/0:15,0:13:15.52:0,16,712	0/0:15,0:15:39.13:0,39,1476	0/0:29,0:25:72.20:0,72,3482	0/0:13,0:10:24.04:0,24,774	0/1:18,2:17:57.18:429,0,57	1/1:8,2:10:19.07:186,19,0	1/1:9,5:13:19.23:190,19,0	0/0:10,0:7:18.02:0,18,709	0/0:15,0:14:18.90:0,19,804	0/0:17,0:14:15.02:0,15,695	0/0:14,0:14:30.10:0,30,1102	0/0:20,0:19:51:0,51,2341	0/0:17,0:16:42.10:0,42,1951	0/0:8,0:5:9:0,9,354
chr10	17446578	.	TG	T	1912.42	PASS	AB=0.884;AC=24;AF=0.429;AN=56;BaseQRankSum=8.942;DP=531;FS=15.733;HRun=10;HaplotypeScore=75.8477;InbreedingCoeff=0.5852;MQ=79.73;MQ0=0;MQRankSum=-2.557;QD=6.27;ReadPosRankSum=-1.003;VQSLOD=0.2712;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:26,2:28:6.99:7,0,386	0/0:5,0:5:6.02:0,6,66	0/0:14,0:14:26.97:0,27,267	0/0:19,0:20:8.43:0,8,244	0/0:11,1:12:1.02:0,1,239	1/1:12,0:12:6.95:52,7,0	1/1:25,0:25:3.26:117,3,0	1/1:5,12:18:9.79:237,10,0	0/0:26,1:27:40.13:0,40,662	0/0:24,0:24:16.38:0,16,398	0/0:7,0:7:15.04:0,15,166	0/0:25,3:28:40.10:0,40,652	0/1:15,4:19:39.08:39,0,282	0/0:18,1:19:13.04:0,13,360	1/1:18,0:18:16.23:98,16,0	1/1:22,0:22:6.70:134,7,0	0/1:12,2:14:13.01:13,0,326	1/1:32,0:32:14.34:89,14,0	1/1:4,12:16:32.96:286,33,0	1/1:3,15:18:41.97:364,42,0	1/1:7,25:32:68.98:599,69,0	0/0:19,1:20:10.09:0,10,321	0/0:18,0:18:39.09:0,39,423	0/1:32,4:36:20.97:21,0,661	1/1:15,0:15:9.97:54,10,0	0/0:13,0:13:30.08:0,30,331	0/0:6,0:6:15.03:0,15,157	0/0:13,0:13:30.08:0,30,332
chr10	17446587	.	GGA	G	1018.43	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=9.829;DP=502;FS=1.670;HRun=0;HaplotypeScore=78.7910;InbreedingCoeff=0.9802;MQ=77.36;MQ0=0;MQRankSum=-0.701;QD=9.26;ReadPosRankSum=2.974;VQSLOD=3.4331;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:65.92:0,66,868	0/0:3,0:3:9.02:0,9,128	0/0:12,0:12:27.06:0,27,346	0/0:18,0:18:39.96:0,40,542	0/0:18,0:18:47.90:0,48,574	1/1:11,3:14:22.42:197,22,0	1/1:21,4:25:43.75:302,44,0	0/0:22,0:22:51.47:0,51,433	0/0:23,0:23:66.07:0,66,1034	0/0:17,0:17:45.61:0,46,695	0/0:7,0:7:18.05:0,18,268	0/0:25,0:25:69.09:0,69,1107	0/0:20,0:20:53.79:0,54,662	0/0:19,0:19:56.91:0,57,793	1/1:13,1:14:18.26:96,18,0	1/1:19,2:21:40.04:263,40,0	0/0:15,0:15:44.86:0,45,624	1/1:22,4:26:30.37:239,30,0	0/0:20,0:20:55.77:0,56,415	0/0:16,0:16:42.09:0,42,235	0/0:29,0:29:74.25:0,74,439	0/0:20,0:20:53.35:0,53,748	0/0:15,0:15:42.12:0,42,647	0/0:34,0:34:84.07:0,84,1207	1/1:9,1:10:16.50:108,16,0	0/0:15,0:15:39.10:0,39,575	0/0:6,0:6:18.03:0,18,274	0/0:13,0:13:39.10:0,39,593
chr10	17446588	.	GA	G	1944.48	PASS	AB=0.990;AC=15;AF=0.268;AN=56;BaseQRankSum=13.180;DP=497;FS=27.619;HRun=1;HaplotypeScore=65.0841;InbreedingCoeff=0.7876;MQ=77.65;MQ0=0;MQRankSum=-3.218;QD=11.44;ReadPosRankSum=4.648;VQSLOD=0.2307;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:54.85:0,55,688	0/0:3,0:3:9.02:0,9,108	0/0:12,0:12:32.95:0,33,347	0/0:18,0:18:38.36:0,38,444	0/0:18,0:18:44.53:0,45,465	1/1:4,10:14:23.96:227,24,0	1/1:5,17:22:47.65:523,48,0	0/0:23,0:23:33.55:0,34,327	0/0:22,0:22:56.57:0,57,807	0/0:15,2:17:17.68:0,18,546	0/0:6,0:6:18.04:0,18,212	0/0:25,0:25:61.34:0,61,871	0/0:20,0:20:41.35:0,41,502	0/0:19,0:19:45.50:0,45,608	1/1:1,13:14:20.96:264,21,0	1/1:3,17:20:44.40:520,44,0	0/0:17,0:17:41.91:0,42,513	1/1:5,19:24:32.65:332,33,0	0/1:19,0:19:2.50:2,0,189	0/1:16,0:16:0.47:64,0,0	0/1:30,1:31:29.29:29,0,73	0/0:20,0:20:29.90:0,30,549	0/0:15,0:15:45.10:0,45,542	0/0:32,1:33:40.15:0,40,923	1/1:3,7:10:17.76:173,18,0	0/0:15,0:15:42.08:0,42,493	0/0:6,0:6:18.03:0,18,221	0/0:13,0:13:39.08:0,39,481
chr10	17448738	.	G	GTCCATCCATCCA	10753.46	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=-2.192;DP=714;FS=7.187;HRun=0;HaplotypeScore=230.8858;InbreedingCoeff=0.8621;MQ=61.99;MQ0=1;MQRankSum=-13.129;QD=48.88;ReadPosRankSum=-4.651;VQSLOD=2.9572;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:33,16:49:54.19:2713,54,0	0/0:6,0:6:15.05:0,15,393	0/0:28,0:22:18.06:0,18,461	0/0:19,0:16:21.06:0,21,384	0/0:19,0:19:39.11:0,39,1272	0/0:22,0:22:45.15:0,45,1501	0/0:38,0:38:57.18:0,57,1821	0/0:31,0:31:25.95:0,26,905	0/0:28,0:28:57.17:0,57,1708	0/0:30,0:30:63.22:0,63,2085	0/0:13,0:14:24.08:0,24,758	1/1:22,4:30:27.09:1309,27,0	1/1:16,14:31:60.21:3062,60,0	1/1:14,7:24:24.08:1274,24,0	0/0:28,0:28:57.16:0,57,1708	0/0:32,0:32:78.27:0,78,2659	0/0:22,0:22:53.02:0,53,1829	0/1:19,0:19:99:133,0,1223	0/0:11,0:11:21.07:0,21,666	0/0:21,0:21:45.62:0,46,1426	0/0:39,0:39:63.22:0,63,1898	1/1:10,5:17:11.76:701,12,0	1/1:10,3:15:2.73:175,3,0	1/1:21,10:33:23.75:1385,24,0	0/0:17,0:17:24.08:0,24,825	0/0:34,0:34:54.19:0,54,1822	0/0:30,0:29:66.23:0,66,2133	0/0:24,0:24:51.17:0,51,1648
chr10	17448991	.	CT	C	2253.99	PASS	AB=0.880;AC=21;AF=0.375;AN=56;BaseQRankSum=6.712;DP=418;FS=1.600;HRun=12;HaplotypeScore=48.5638;InbreedingCoeff=0.7026;MQ=61.60;MQ0=6;MQRankSum=0.768;QD=12.12;ReadPosRankSum=0.721;VQSLOD=3.1902;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:18:0:0,0,0	0/0:8,0:8:20.96:0,21,199	0/0:7,0:6:8.84:0,9,69	0/0:7,0:3:0:0,0,0	0/0:23,1:24:33.85:0,34,513	1/1:4,13:17:32.85:255,33,0	1/1:3,5:8:11.95:93,12,0	1/1:9,28:35:43.30:509,43,0	0/0:6,0:6:12.02:0,12,122	0/0:19,1:19:42.04:0,42,409	0/0:9,0:8:24.05:0,24,244	0/0:11,0:11:0:0,0,0	0/0:10,0:10:0:0,0,0	0/0:8,0:8:0:0,0,0	1/1:2,10:12:31.92:238,32,0	1/1:6,5:12:16.97:122,17,0	0/0:28,0:28:62.99:0,63,624	1/1:3,16:19:47.81:371,48,0	1/1:5,15:20:41.78:320,42,0	1/1:4,14:17:38.68:286,39,0	1/1:4,3:7:5.97:46,6,0	0/0:6,0:6:0:0,0,0	0/0:8,0:8:0:0,0,0	0/0:22,0:22:0:0,0,0	1/1:3,8:10:20.91:163,21,0	0/0:22,0:22:54.10:0,54,543	0/0:16,0:17:38.91:0,39,379	0/1:19,3:22:27.64:28,0,287
chr10	17450158	.	T	TC	3034.19	PASS	AB=1.000;AC=33;AF=0.589;AN=56;BaseQRankSum=6.368;DP=442;FS=17.509;HRun=3;HaplotypeScore=125.0548;InbreedingCoeff=0.8422;MQ=82.54;MQ0=0;MQRankSum=-10.244;QD=12.49;ReadPosRankSum=-1.931;VQSLOD=1.0559;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:25,12:40:90.62:514,91,0	0/0:7,0:7:18.05:0,18,216	0/0:24,0:22:54.78:0,55,479	0/0:27,0:23:30.51:0,31,291	0/0:11,0:11:26.97:0,27,306	1/1:8,0:8:11.90:93,12,0	1/1:17,0:17:12.18:95,12,0	1/1:3,2:5:14.91:118,15,0	0/0:26,0:26:57.05:0,57,675	0/0:18,0:18:42.07:0,42,482	0/0:5,0:5:8.79:0,9,90	1/1:29,7:36:92.81:495,93,0	1/1:12,2:14:38.01:200,38,0	1/1:19,10:29:64.82:360,65,0	1/1:12,1:13:26.97:231,27,0	0/1:5,0:5:26.83:66,0,27	0/0:37,0:37:93.09:0,93,1183	1/1:16,0:16:44.77:393,45,0	1/1:5,0:5:14.91:115,15,0	1/1:2,0:2:3:26,3,0	1/1:20,0:20:26.80:209,27,0	1/1:5,0:4:5.49:24,5,0	1/1:6,0:6:11.08:49,11,0	1/1:9,11:20:28.49:211,28,0	1/1:2,0:2:6:54,6,0	0/0:15,0:15:38.80:0,39,444	0/0:23,0:23:45.12:0,45,548	0/0:6,0:6:18.02:0,18,212
chr10	17450159	.	CGGGGGGGGA	C	9712.10	PASS	AB=1.000;AC=28;AF=0.500;AN=56;BaseQRankSum=5.883;DP=442;FS=1.697;HRun=0;HaplotypeScore=153.7204;InbreedingCoeff=0.5551;MQ=80.82;MQ0=0;MQRankSum=-10.682;QD=39.97;ReadPosRankSum=2.097;VQSLOD=4.8477;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:15,24:39:96.03:2119,96,0	0/0:8,0:8:24.08:0,24,921	0/0:23,0:22:51.99:0,52,1291	0/0:25,0:21:49.28:0,49,1185	0/0:11,0:11:30.02:0,30,1283	0/1:8,0:8:2.94:77,0,3	0/1:18,0:18:62.98:63,0,216	1/1:5,0:5:14.91:144,15,0	0/0:28,0:28:84.15:0,84,3197	0/0:17,0:17:49.92:0,50,1867	0/0:5,0:5:12.01:0,12,498	1/1:7,29:36:99:2504,99,0	1/1:2,12:14:42.10:1034,42,0	1/1:9,19:28:69.11:1666,69,0	1/1:14,0:14:26.97:231,27,0	0/1:5,0:5:65.02:65,0,140	0/0:38,0:38:99:0,114,4852	0/1:16,0:16:38.12:321,0,38	0/1:7,0:7:79.95:80,0,111	0/1:3,0:3:19.95:20,0,79	1/1:19,0:19:25.55:207,26,0	1/1:0,4:3:6.02:164,6,0	1/1:2,4:6:12.04:330,12,0	1/1:10,9:19:30.08:632,30,0	1/1:2,0:2:6:54,6,0	0/0:16,0:16:44.83:0,45,1746	0/0:21,0:21:60.18:0,60,2432	0/0:6,0:6:18.02:0,18,545
chr10	17450165	.	GGGAC	G	4482.07	PASS	AB=1.000;AC=31;AF=0.554;AN=56;BaseQRankSum=11.578;DP=422;FS=17.680;HRun=0;HaplotypeScore=129.3238;InbreedingCoeff=0.7720;MQ=80.94;MQ0=0;MQRankSum=-11.247;QD=21.55;ReadPosRankSum=1.780;VQSLOD=3.5022;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:38,0:38:77.93:852,78,0	0/0:8,0:8:24.04:0,24,365	0/0:24,0:22:43.93:0,44,703	0/0:25,0:21:13.56:0,14,570	0/0:13,0:13:33.08:0,33,664	1/1:2,6:8:2.58:38,3,0	1/1:17,1:18:17.24:223,17,0	1/1:6,0:6:6:64,6,0	0/0:29,0:29:78.14:0,78,1468	0/0:18,0:18:48.06:0,48,976	0/0:6,0:6:15.01:0,15,253	1/1:34,0:34:52.25:973,52,0	1/1:14,0:14:38.98:436,39,0	1/1:25,0:25:61.60:682,62,0	0/0:11,0:11:0.46:0,0,1	0/1:6,0:6:55.78:144,0,56	0/0:39,0:39:99:0,107,2314	1/1:12,0:12:25.55:335,26,0	1/1:5,0:5:12.01:134,12,0	1/1:2,0:2:3.46:24,3,0	1/1:14,0:14:1.25:3,1,0	1/1:4,0:3:6.02:70,6,0	1/1:5,0:5:12.04:140,12,0	1/1:15,0:15:29.64:273,30,0	1/1:2,0:2:6.02:90,6,0	0/0:18,0:18:48.10:0,48,866	0/0:18,0:18:54.14:0,54,1082	0/0:5,0:5:15.05:0,15,262
chr10	17450166	.	GGAC	G	4054.75	PASS	AB=1.000;AC=31;AF=0.554;AN=56;BaseQRankSum=11.230;DP=414;FS=17.580;HRun=0;HaplotypeScore=121.9857;InbreedingCoeff=0.7656;MQ=80.40;MQ0=0;MQRankSum=-11.064;QD=19.97;ReadPosRankSum=1.925;VQSLOD=2.4225;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:37,0:37:77.13:721,77,0	0/0:8,0:8:23.71:0,24,302	0/0:23,0:21:40.16:0,40,575	0/0:24,0:21:5.11:0,5,463	0/0:12,0:12:33.10:0,33,563	1/1:8,0:8:2.79:39,3,0	1/1:4,14:18:17.31:231,17,0	1/1:6,0:6:6:64,6,0	0/0:29,0:29:77.94:0,78,1206	0/0:18,0:18:48.04:0,48,833	0/0:6,0:6:14.97:0,15,201	1/1:34,0:34:39.58:796,40,0	1/1:14,0:14:38.94:368,39,0	1/1:24,0:24:61.52:574,62,0	0/0:10,0:10:0.47:0,0,1	0/1:5,0:5:43.60:166,0,44	0/0:39,0:39:99:0,106,1968	1/1:10,0:10:26.97:352,27,0	1/1:5,0:5:12.04:175,12,0	1/1:2,0:2:5.89:61,6,0	1/1:14,0:14:1.25:3,1,0	1/1:4,0:3:6.01:59,6,0	1/1:5,0:5:12.02:118,12,0	1/1:15,0:15:29.61:239,30,0	1/1:2,0:2:6.02:90,6,0	0/0:18,0:18:51.05:0,51,777	0/0:18,0:18:54.11:0,54,898	0/0:5,0:5:15.05:0,15,229
chr10	17450167	.	GAC	G	3545.70	PASS	AB=0.990;AC=32;AF=0.571;AN=56;BaseQRankSum=11.077;DP=415;FS=21.657;HRun=0;HaplotypeScore=116.8889;InbreedingCoeff=0.6089;MQ=81.30;MQ0=0;MQRankSum=-11.410;QD=14.77;ReadPosRankSum=2.270;VQSLOD=2.1437;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:37,0:37:73.93:575,74,0	0/0:8,0:8:17.54:0,18,251	0/0:24,0:22:28.73:0,29,555	0/1:24,0:21:10.78:11,0,398	0/1:13,0:13:4.59:5,0,446	1/1:6,2:8:3:39,3,0	1/1:17,1:18:17.91:229,18,0	1/1:4,2:6:6:64,6,0	0/0:29,0:29:74.38:0,74,965	0/0:18,0:18:48:0,48,695	0/0:6,0:6:14.93:0,15,167	1/1:34,0:34:39.46:633,39,0	1/1:14,0:14:38.78:300,39,0	1/1:24,0:24:61.27:468,61,0	0/0:1,9:10:0.47:0,0,1	0/1:5,0:5:32.83:166,0,33	0/0:39,0:39:99:0,106,1651	1/1:8,0:9:27.01:373,27,0	1/1:0,5:5:12.04:175,12,0	1/1:2,0:2:6.02:77,6,0	1/1:0,13:13:1.25:3,1,0	0/1:5,0:4:10.79:39,0,11	1/1:5,0:5:11.97:95,12,0	1/1:15,0:15:29.54:205,30,0	1/1:2,0:2:6.02:90,6,0	0/0:18,0:18:51.02:0,51,692	0/0:18,0:18:54.13:0,54,746	0/0:5,0:5:15.05:0,15,222
chr10	17450169	.	CG	C	1416.50	PASS	AB=0.962;AC=19;AF=0.352;AN=54;BaseQRankSum=12.559;DP=396;FS=2.210;HRun=9;HaplotypeScore=108.2729;InbreedingCoeff=0.6506;MQ=82.27;MQ0=0;MQRankSum=-11.253;QD=9.98;ReadPosRankSum=5.157;VQSLOD=2.2851;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,24:27:66.95:379,67,0	0/0:9,0:9:14.77:0,15,141	0/1:24,1:23:19.31:19,0,258	0/0:23,0:19:14.08:0,14,210	0/0:13,0:13:28.33:0,28,313	0/0:8,0:8:0:0,0,0	0/0:19,0:19:3.72:0,4,26	0/0:7,0:7:0:0,0,0	0/0:27,1:29:62.89:0,63,660	0/0:19,0:19:45.12:0,45,505	0/0:6,0:6:15.03:0,15,161	1/1:1,29:30:84.53:481,85,0	1/1:0,12:12:34.64:189,35,0	1/1:0,19:19:55.36:314,55,0	./.	0/0:5,0:5:3.23:0,3,35	0/0:40,0:40:93.22:0,93,1040	1/1:8,0:8:1.26:2,1,0	0/0:5,0:5:1.83:0,2,4	0/0:2,0:2:0.89:0,1,2	0/0:13,0:13:0.47:0,0,1	1/1:1,4:4:6.69:34,7,0	1/1:1,4:5:11.63:66,12,0	1/1:0,9:9:17.41:97,17,0	1/1:2,0:2:1.36:3,1,0	0/0:20,1:21:17.70:0,18,434	0/0:19,1:20:26.66:0,27,528	0/0:6,0:6:0:0,0,0
chr10	17450553	.	C	CA	1967.26	PASS	AB=1.000;AC=22;AF=0.524;AN=42;BaseQRankSum=7.209;DP=345;FS=0.494;HRun=10;HaplotypeScore=111.2857;InbreedingCoeff=0.8240;MQ=55.80;MQ0=9;MQRankSum=-8.214;QD=10.99;ReadPosRankSum=-3.052;VQSLOD=2.3596;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	0/0:8,0:8:19.88:0,20,101	0/0:18,0:9:13.97:0,14,102	0/1:21,0:12:0.03:0,0,48	0/0:26,0:25:48.14:0,48,264	1/1:2,5:8:20.88:203,21,0	1/1:7,2:8:2.12:31,2,0	1/1:17,0:18:19.18:103,19,0	0/0:10,0:10:20.95:0,21,172	0/0:14,0:14:34.94:0,35,163	0/1:14,0:14:0.06:0,0,117	./.	./.	./.	1/1:5,8:12:30.06:307,30,0	1/1:8,13:21:44.47:499,44,0	0/0:33,0:33:61.92:0,62,327	1/1:6,8:14:5.64:260,6,0	1/1:10,0:24:39.47:249,39,0	1/1:8,1:18:35.42:174,35,0	1/1:3,0:5:7.66:32,8,0	./.	./.	./.	1/1:3,8:12:29.82:283,30,0	0/0:21,0:21:36.96:0,37,175	0/0:21,0:22:39.75:0,40,216	0/0:10,0:9:16.79:0,17,91
chr10	17450564	.	C	CAA	4599.76	PASS	AB=0.986;AC=24;AF=0.571;AN=42;BaseQRankSum=-0.398;DP=349;FS=2.008;HRun=10;HaplotypeScore=115.5538;InbreedingCoeff=0.3819;MQ=69.16;MQ0=8;MQRankSum=-8.073;QD=19.91;ReadPosRankSum=-4.186;VQSLOD=3.0420;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	./.	0/1:9,0:9:6.73:7,0,75	0/0:31,0:19:10.27:0,10,259	0/1:26,0:16:39.23:39,0,69	0/1:25,0:25:51.15:51,0,200	1/1:9,0:9:21.06:242,21,0	0/1:7,0:6:1.91:88,0,2	1/1:8,10:17:38.53:498,39,0	0/0:9,0:9:24.07:0,24,289	0/0:14,0:14:15.60:0,16,134	0/0:14,0:14:15.80:0,16,127	./.	./.	./.	1/1:13,0:12:36.09:406,36,0	1/1:19,0:19:54.10:587,54,0	0/0:28,0:28:4.95:0,5,259	1/1:15,0:15:0.74:329,1,0	1/1:16,15:30:77.63:1165,78,0	1/1:1,13:14:39.06:602,39,0	1/1:0,5:5:12.04:179,12,0	./.	./.	./.	1/1:11,0:11:33.08:357,33,0	0/1:18,0:19:34.16:34,0,115	0/0:19,0:19:15.45:0,15,187	0/1:8,0:8:16.76:17,0,69
chr10	17450571	.	CA	C	866.91	PASS	AB=0.933;AC=11;AF=0.250;AN=44;BaseQRankSum=7.924;DP=366;FS=1.710;HRun=8;HaplotypeScore=123.9900;InbreedingCoeff=0.8384;MQ=70.66;MQ0=6;MQRankSum=-9.328;QD=11.56;ReadPosRankSum=0.721;VQSLOD=2.4545;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	0/0:11,0:11:33.10:0,33,393	0/0:35,0:22:44.60:0,45,403	0/0:32,0:18:15.68:0,16,183	0/0:27,0:27:72.21:0,72,855	1/1:9,1:10:29.26:203,29,0	1/1:6,0:5:8.82:61,9,0	0/0:18,0:18:50.74:0,51,509	0/0:10,0:10:30.08:0,30,351	0/0:15,0:15:42.13:0,42,507	0/0:13,0:13:39.12:0,39,466	./.	./.	./.	1/1:13,0:12:33.73:185,34,0	1/1:18,2:20:29.87:210,30,0	0/0:27,0:27:72.22:0,72,868	0/1:13,1:14:6.87:178,0,7	0/0:30,0:29:84.02:0,84,897	0/0:14,0:14:36.03:0,36,383	0/0:5,0:5:9.03:0,9,104	./.	0/0:1,0:1:0:0,0,0	./.	1/1:11,1:12:33.57:189,34,0	0/0:20,0:20:60.13:0,60,702	0/0:19,0:19:51.15:0,51,609	0/0:12,0:12:36.11:0,36,430
chr10	17450572	.	A	AC	2391.39	PASS	AB=0.850;AC=25;AF=0.446;AN=56;BaseQRankSum=7.305;DP=399;FS=2.087;HRun=1;HaplotypeScore=127.1887;InbreedingCoeff=0.5928;MQ=69.55;MQ0=5;MQRankSum=-9.883;QD=16.38;ReadPosRankSum=0.586;VQSLOD=3.8996;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,0:5:12:42,12,0	0/0:11,0:11:33.11:0,33,451	0/0:35,0:22:43.01:0,43,461	0/1:33,0:19:8.78:9,0,138	0/0:28,0:28:78.17:0,78,1027	1/1:3,7:10:29.19:344,29,0	0/1:3,3:5:7.72:114,0,8	0/0:19,0:19:40.51:0,41,268	0/0:10,0:10:30.09:0,30,402	0/0:15,0:15:45.11:0,45,589	0/0:13,0:13:39.13:0,39,536	1/1:4,0:4:6.44:21,6,0	1/1:7,0:7:8.53:34,9,0	1/1:3,0:3:2.36:9,2,0	1/1:2,10:12:36.11:481,36,0	1/1:4,16:20:50.46:624,50,0	0/0:27,0:27:78.14:0,78,1034	0/1:4,10:14:16.28:412,0,16	0/0:30,0:29:73.34:0,73,376	0/0:14,0:14:20:0,20,89	0/1:5,0:5:18.38:18,0,27	1/1:6,0:5:3.69:12,4,0	1/1:3,0:3:0.79:2,1,0	0/1:5,0:5:0.32:12,0,0	1/1:2,10:12:33.58:451,34,0	0/0:20,0:20:60.19:0,60,803	0/0:19,0:19:54.14:0,54,729	0/0:12,0:12:36.12:0,36,496
chr10	17450584	.	C	CTT	1584.43	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-2.948;DP=428;FS=0.618;HRun=4;HaplotypeScore=123.9119;InbreedingCoeff=0.9529;MQ=75.44;MQ0=4;MQRankSum=-7.556;QD=36.85;ReadPosRankSum=-0.820;VQSLOD=2.4028;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,5:5:15.05:264,15,0	0/0:11,0:11:33.11:0,33,439	0/0:34,0:27:39.31:0,39,494	0/0:37,0:21:19.62:0,20,257	0/0:27,0:27:81.25:0,81,1059	0/0:11,0:11:32.32:0,32,222	0/0:5,0:5:11.84:0,12,89	0/0:20,0:20:48.11:0,48,617	0/0:11,0:11:33.11:0,33,439	0/0:17,0:17:51.17:0,51,680	0/0:17,0:17:48.16:0,48,638	1/1:0,6:6:12.04:210,12,0	1/1:1,8:9:24.08:409,24,0	1/1:0,3:4:8.89:159,9,0	0/0:13,0:13:31.33:0,31,233	0/0:17,0:17:23.91:0,24,207	0/0:27,0:27:72.20:0,72,941	0/0:18,0:18:18.10:0,18,281	0/0:27,0:26:75.23:0,75,968	0/0:14,0:14:39.13:0,39,504	0/0:7,0:7:15.05:0,15,196	1/1:0,7:7:18.06:310,18,0	1/1:0,3:3:9.03:158,9,0	1/1:0,8:8:15.05:263,15,0	0/0:14,0:14:40.33:0,40,256	0/0:24,0:24:69.22:0,69,920	0/0:20,0:20:51.17:0,51,679	0/0:12,0:12:33.11:0,33,440
chr10	17450588	.	T	TA	1834.11	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=3.944;DP=429;FS=0.518;HRun=8;HaplotypeScore=113.1216;InbreedingCoeff=0.8977;MQ=75.65;MQ0=3;MQRankSum=-7.011;QD=23.51;ReadPosRankSum=0.152;VQSLOD=2.9296;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:7:8.43:0,8,39	0/0:11,0:11:30.01:0,30,275	0/0:38,0:27:21.05:0,21,212	0/0:34,0:21:8.28:0,8,115	0/0:27,0:27:72.02:0,72,654	1/1:2,10:12:27.08:311,27,0	1/1:1,5:6:9.03:104,9,0	0/0:20,0:20:50.93:0,51,449	0/0:11,0:11:30.01:0,30,274	0/0:18,0:18:54.02:0,54,491	0/0:16,0:16:42.02:0,42,384	0/0:6,0:6:7.54:0,8,23	0/0:9,0:9:17.06:0,17,65	0/0:5,0:5:9.15:0,9,44	1/1:3,10:13:24.07:277,24,0	1/1:3,14:17:41.86:461,42,0	0/0:26,0:26:78.01:0,78,700	1/1:3,13:16:36.11:414,36,0	0/0:26,0:26:44.99:0,45,522	0/0:14,0:14:38.94:0,39,345	0/0:8,0:8:17.99:0,18,159	0/0:10,0:9:15.07:0,15,92	0/0:3,0:3:6.93:0,7,25	0/0:8,0:8:8:0,8,22	1/1:1,13:14:39.12:450,39,0	0/0:24,0:24:69.03:0,69,628	0/0:18,0:18:50.98:0,51,455	0/0:11,0:11:33.02:0,33,302
chr10	17451044	.	G	GC	4849.12	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-5.997;DP=510;FS=6.130;HRun=5;HaplotypeScore=52.1714;InbreedingCoeff=0.9193;MQ=78.59;MQ0=0;MQRankSum=-2.806;QD=32.11;ReadPosRankSum=3.404;VQSLOD=5.4257;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,39:46:99:1451,111,0	0/0:7,0:7:21.05:0,21,225	0/0:12,0:12:27.05:0,27,275	0/0:18,0:18:51.07:0,51,515	0/0:5,0:5:15.04:0,15,160	0/0:14,0:14:42.11:0,42,450	0/0:46,0:46:99:0,114,1184	0/0:20,0:20:54.06:0,54,542	0/0:15,0:15:45.11:0,45,482	0/0:14,0:14:39.08:0,39,406	0/0:2,0:2:0.88:0,1,2	1/1:2,20:23:57.10:722,57,0	1/1:0,17:17:45.15:588,45,0	1/1:1,23:24:54.18:710,54,0	0/0:21,0:21:57.12:0,57,603	0/0:12,0:12:33.08:0,33,354	0/0:42,0:42:99:0,123,1311	0/0:23,0:23:54.09:0,54,562	0/0:15,0:15:42.08:0,42,435	0/0:4,0:4:11.62:0,12,106	0/0:48,0:48:99:0,141,1470	1/1:1,3:4:6.02:79,6,0	1/1:0,3:3:9.03:117,9,0	1/1:2,32:34:90.29:1184,90,0	0/0:4,0:4:9.02:0,9,96	0/0:12,0:12:32.10:0,32,317	0/0:18,0:18:48.10:0,48,504	0/0:7,0:7:20.92:0,21,183
chr10	17451227	.	CG	C	811.43	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=8.122;DP=210;FS=0.000;HRun=6;HaplotypeScore=46.6998;InbreedingCoeff=0.7636;MQ=93.54;MQ0=0;MQRankSum=-7.442;QD=18.87;ReadPosRankSum=0.356;VQSLOD=2.8066;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,9:10:27.07:286,27,0	0/0:2,0:2:6.02:0,6,79	0/0:17,0:16:45.06:0,45,530	0/0:12,0:13:23.92:0,24,281	0/0:5,0:5:3.01:0,3,39	0/0:7,0:7:15.05:0,15,197	0/0:18,0:18:45.10:0,45,570	0/0:2,0:2:6.02:0,6,76	0/0:8,0:8:24.06:0,24,300	0/0:7,0:7:17.56:0,18,235	0/0:5,0:5:15.05:0,15,197	1/1:0,6:6:18.05:192,18,0	1/1:1,3:4:9.02:96,9,0	1/1:1,2:3:6.01:64,6,0	0/0:4,0:4:6.02:0,6,79	0/0:3,0:3:9.03:0,9,118	0/0:21,0:21:54.18:0,54,711	0/0:16,0:16:9.19:0,9,317	0/0:3,0:3:6.02:0,6,79	0/0:3,0:3:6.02:0,6,79	0/0:15,0:15:42.14:0,42,551	1/1:1,8:9:19.98:197,20,0	1/1:0,3:3:6.02:64,6,0	1/1:1,7:8:8.96:90,9,0	0/0:4,0:4:9.03:0,9,118	0/0:4,0:4:9.03:0,9,118	0/0:7,0:7:21.03:0,21,257	0/0:3,0:3:9.03:0,9,118
chr10	17451242	.	C	CCG	916.01	PASS	AC=12;AF=0.240;AN=50;BaseQRankSum=7.112;DP=140;FS=0.000;HRun=0;HaplotypeScore=41.5015;InbreedingCoeff=0.7118;MQ=80.50;MQ0=0;MQRankSum=-6.458;QD=32.71;ReadPosRankSum=0.629;VQSLOD=5.2082;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,7:8:17.89:275,18,0	./.	0/0:14,0:13:35.94:0,36,440	0/0:6,0:7:5.93:0,6,177	0/0:4,0:4:9.03:0,9,145	0/0:6,0:6:15.04:0,15,219	0/0:13,0:13:36.11:0,36,539	0/0:1,0:1:3.01:0,3,49	0/0:3,0:3:9.03:0,9,146	0/0:4,0:4:12.04:0,12,195	0/0:5,0:5:15.05:0,15,236	1/1:3,2:5:14.41:137,14,0	1/1:0,2:2:6.02:119,6,0	1/1:0,2:2:6.02:119,6,0	0/0:2,0:2:6.02:0,6,97	0/0:3,0:3:6.02:0,6,97	0/0:15,0:16:45.61:0,46,708	0/0:8,0:9:15.39:0,15,296	./.	0/0:1,0:1:3.01:0,3,49	0/0:11,0:10:30.01:0,30,385	1/1:1,6:7:17.95:307,18,0	./.	1/1:1,3:4:6.02:119,6,0	0/0:2,0:2:6.02:0,6,96	0/0:3,0:3:9.02:0,9,120	0/0:3,0:3:9.03:0,9,145	0/0:3,0:3:9.03:0,9,146
chr10	17451257	.	C	CG	400.27	PASS	AB=0.833;AC=16;AF=0.364;AN=44;BaseQRankSum=4.316;DP=90;FS=1.744;HRun=0;HaplotypeScore=34.8894;InbreedingCoeff=0.5070;MQ=81.94;MQ0=0;MQRankSum=-3.668;QD=17.40;ReadPosRankSum=-0.033;VQSLOD=5.1196;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,1:3:5.98:61,6,0	./.	0/0:11,0:10:4.58:0,5,188	0/0:9,0:7:6.60:0,7,52	0/0:3,0:3:9.03:0,9,125	0/1:4,0:4:8.55:9,0,17	0/0:8,0:8:14.03:0,14,53	1/1:1,0:1:0.47:1,0,0	0/0:3,0:3:9.03:0,9,126	0/0:2,0:2:3.01:0,3,41	0/0:3,0:3:9.03:0,9,122	1/1:0,1:1:3.01:40,3,0	1/1:0,2:2:6.02:75,6,0	1/1:0,2:2:6.02:74,6,0	0/0:1,0:1:2.50:0,2,9	0/1:1,1:2:1.68:2,0,5	0/0:12,0:12:36.08:0,36,453	0/0:6,0:6:16.45:0,16,101	./.	./.	./.	1/1:0,6:6:11.72:197,12,0	./.	1/1:0,2:2:6.02:81,6,0	./.	0/0:2,0:2:5.81:0,6,55	0/0:2,0:2:6.02:0,6,78	0/0:2,0:2:6.01:0,6,67
chr10	17451281	.	TG	T	465.31	PASS	AB=0.800;AC=18;AF=0.750;AN=24;BaseQRankSum=-1.730;DP=65;FS=5.979;HRun=3;HaplotypeScore=35.2894;InbreedingCoeff=0.2966;MQ=117.19;MQ0=2;MQRankSum=-1.325;QD=12.24;ReadPosRankSum=-2.209;VQSLOD=0.9023;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/1:13,1:8:16.68:17,0,86	0/0:22,0:12:13.85:0,14,117	./.	1/1:0,1:1:3.01:33,3,0	1/1:1,1:2:3.01:37,3,0	./.	1/1:1,0:1:2.99:24,3,0	1/1:0,1:1:3.01:37,3,0	./.	1/1:0,2:2:6.01:64,6,0	./.	./.	./.	./.	1/1:8,1:9:24.20:237,24,0	1/1:2,1:3:7.49:40,7,0	./.	./.	1/1:1,2:2:6.02:73,6,0	./.	./.	./.	./.	0/0:1,0:1:2.37:0,2,8	0/1:1,1:2:0.07:0,0,0	./.
chr10	17451373	.	C	CG	82.11	PASS	AB=0.556;AC=5;AF=0.250;AN=20;BaseQRankSum=-0.306;DP=39;FS=13.570;HRun=5;HaplotypeScore=20.0583;InbreedingCoeff=0.2648;MQ=74.13;MQ0=4;MQRankSum=-2.143;QD=10.26;ReadPosRankSum=-0.674;VQSLOD=-0.2408;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,0:1:2.97:20,3,0	./.	0/0:8,0:3:5.38:0,5,40	0/0:7,0:1:2.97:0,3,20	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	0/0:2,0:2:3.01:0,3,32	0/0:3,0:2:6.02:0,6,64	0/0:1,0:1:3.01:0,3,32	./.	0/0:4,0:4:3.01:0,3,32	1/1:0,2:2:6.02:79,6,0	./.	0/1:1,4:5:3.50:70,0,4	./.	0/0:1,0:1:3.01:0,3,31	./.	./.
chr10	17451414	.	G	GA	111.36	PASS	AB=1.000;AC=7;AF=0.167;AN=42;BaseQRankSum=-0.561;DP=59;FS=2.509;HRun=0;HaplotypeScore=16.7511;InbreedingCoeff=0.3529;MQ=84.37;MQ0=1;MQRankSum=-0.475;QD=11.14;ReadPosRankSum=-1.425;VQSLOD=2.9935;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:2,0:2:5.05:0,5,48	0/0:1,0:1:3.01:0,3,41	0/0:9,0:5:9:0,9,103	0/0:5,0:2:2.80:0,3,13	0/0:1,0:1:3.01:0,3,42	./.	1/1:1,3:4:6.02:86,6,0	0/0:2,0:2:6.02:0,6,84	./.	0/0:1,0:1:3.01:0,3,42	./.	0/0:3,0:3:9.03:0,9,126	./.	0/0:3,0:3:9.03:0,9,125	./.	1/1:0,1:1:3.01:45,3,0	0/0:2,0:2:6.02:0,6,84	1/1:0,3:3:6.02:85,6,0	0/0:4,0:3:9.02:0,9,109	0/0:2,0:2:6.02:0,6,83	0/0:7,0:6:14.94:0,15,163	0/1:2,0:2:0:0,0,0	0/0:1,0:1:3.01:0,3,42	0/0:3,0:3:3.48:0,3,43	./.	0/0:1,0:1:3.01:0,3,42	0/0:1,0:1:3.01:0,3,42	./.
chr10	17451961	.	AG	A	3813.93	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=8.902;DP=383;FS=1.555;HRun=4;HaplotypeScore=41.7931;InbreedingCoeff=0.9508;MQ=85.48;MQ0=0;MQRankSum=-1.832;QD=32.60;ReadPosRankSum=1.897;VQSLOD=3.8925;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,32:33:90.23:1080,90,0	0/0:4,0:4:12.04:0,12,167	0/0:9,0:9:27.09:0,27,366	0/0:23,0:22:51.58:0,52,659	0/0:3,0:3:9.03:0,9,126	0/0:14,0:14:42.10:0,42,565	0/0:13,0:13:36.12:0,36,504	0/0:13,0:13:36.05:0,36,479	0/0:7,0:7:18.06:0,18,252	0/0:12,0:12:33.11:0,33,462	0/0:2,0:2:6.02:0,6,84	1/1:1,12:13:33.10:396,33,0	1/1:0,8:8:21.06:252,21,0	1/1:1,17:18:48.15:576,48,0	0/0:15,0:15:39.13:0,39,545	0/0:10,0:10:30.10:0,30,420	0/0:18,0:18:51.17:0,51,714	0/0:26,0:26:75.22:0,75,1014	0/0:8,0:8:18.06:0,18,252	0/0:5,0:5:15.05:0,15,209	0/0:45,0:45:99:0,123,1682	1/1:0,6:6:18.05:214,18,0	1/1:0,7:7:21.06:252,21,0	1/1:1,31:32:87.26:1044,87,0	0/0:6,0:6:15.04:0,15,195	0/0:16,0:16:45.15:0,45,630	0/0:12,0:12:36.12:0,36,504	0/0:5,0:5:15.05:0,15,210
chr10	17454713	.	G	GA	505.98	PASS	AB=0.898;AC=13;AF=0.241;AN=54;BaseQRankSum=-1.823;DP=341;FS=19.664;HRun=0;HaplotypeScore=80.8060;InbreedingCoeff=0.3398;MQ=64.81;MQ0=1;MQRankSum=0.524;QD=3.44;ReadPosRankSum=2.822;VQSLOD=1.7751;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:44.89:0,45,344	./.	0/0:16,0:14:17.44:0,17,239	0/0:9,0:7:11.87:0,12,85	0/0:6,0:6:8.38:0,8,68	0/1:15,0:15:24.09:24,0,56	0/1:16,10:27:76.46:76,0,124	1/1:15,0:15:23.66:180,24,0	0/0:11,0:11:20.14:0,20,213	0/0:5,0:5:6.42:0,6,47	0/0:4,0:4:6:0,6,53	0/0:16,0:16:5.98:0,6,49	0/0:12,0:12:14.95:0,15,118	0/0:9,0:9:14.91:0,15,119	0/1:9,0:9:8.23:8,0,86	0/1:10,4:14:12.97:13,0,160	0/0:12,0:12:24.83:0,25,211	1/1:17,0:17:11.90:87,12,0	1/1:14,0:14:11.33:65,11,0	0/0:7,0:7:5.50:0,5,14	1/1:27,1:28:0.28:149,0,0	0/0:7,0:7:11.96:0,12,97	0/0:10,0:10:17.39:0,17,120	0/0:13,0:13:29.87:0,30,231	0/1:8,0:8:29.15:62,0,29	0/0:11,0:11:20.21:0,20,162	0/0:16,0:16:12.48:0,12,120	0/0:5,0:5:15:0,15,155
chr10	17454898	.	ATTT	A	2760.25	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=5.480;DP=513;FS=1.513;HRun=14;HaplotypeScore=92.9692;InbreedingCoeff=0.9731;MQ=65.46;MQ0=1;MQRankSum=-0.114;QD=21.91;ReadPosRankSum=4.828;VQSLOD=3.0119;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,32:36:71.84:789,72,0	0/0:8,0:8:24.04:0,24,414	0/0:9,0:8:11.93:0,12,178	0/0:16,0:16:7.13:0,7,282	0/0:19,0:21:42.98:0,43,649	0/0:1,0:19:36.12:0,36,524	0/0:6,0:19:39.11:0,39,537	0/0:18,0:29:57.19:0,57,876	0/0:10,0:10:21.07:0,21,359	0/0:19,0:20:48.14:0,48,823	0/0:15,0:17:40.32:0,40,596	1/1:1,5:7:13.56:173,14,0	1/1:0,14:16:40.78:456,41,0	1/1:2,9:12:27.52:316,28,0	0/0:6,0:22:39.13:0,39,607	0/0:4,0:21:39.11:0,39,549	0/0:13,0:15:45.07:0,45,732	0/0:3,0:16:32.78:0,33,438	0/0:7,0:14:27.08:0,27,382	0/0:12,0:31:78.23:0,78,1167	0/0:8,0:22:42.13:0,42,613	1/1:3,15:20:37.44:435,37,0	1/1:5,16:21:41.43:473,41,0	1/1:2,11:13:27.03:316,27,0	0/0:10,0:17:32.53:0,33,483	0/0:17,0:17:39.10:0,39,670	0/0:24,0:26:69.23:0,69,1191	0/0:14,0:15:36.09:0,36,561
chr10	17455209	.	G	GT	21658.10	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-8.356;DP=517;FS=3.811;HRun=0;HaplotypeScore=48.8908;InbreedingCoeff=0.9989;MQ=83.37;MQ0=0;MQRankSum=-8.908;QD=45.69;ReadPosRankSum=2.875;VQSLOD=4.9608;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,17:18:51.17:815,51,0	1/1:0,9:9:27.09:432,27,0	0/0:12,0:12:36.12:0,36,502	0/0:20,0:20:57.08:0,57,731	1/1:0,22:22:66.23:1055,66,0	1/1:0,25:25:75.26:1199,75,0	1/1:1,26:27:78.27:1247,78,0	1/1:1,20:21:60.20:960,60,0	0/0:11,0:11:33.11:0,33,461	1/1:0,15:15:45.15:720,45,0	1/1:0,20:20:57.19:911,57,0	1/1:2,20:22:54.14:835,54,0	1/1:1,14:15:45.15:712,45,0	1/1:0,20:20:60.20:958,60,0	1/1:0,19:19:51.17:815,51,0	1/1:0,21:21:63.21:1006,63,0	1/1:0,19:19:57.19:911,57,0	1/1:0,17:17:45.15:719,45,0	1/1:0,24:24:72.24:1141,72,0	1/1:0,26:26:75.26:1198,75,0	1/1:1,19:20:48.16:767,48,0	1/1:0,12:12:33.11:527,33,0	1/1:0,13:13:39.13:623,39,0	1/1:0,21:20:54.18:863,54,0	1/1:0,11:11:33.11:527,33,0	1/1:0,19:19:57.19:900,57,0	1/1:1,28:29:87.30:1384,87,0	1/1:0,9:9:27.09:432,27,0
chr10	17455280	.	A	ATT	5539.79	PASS	AB=1.000;AC=31;AF=0.554;AN=56;BaseQRankSum=4.618;DP=435;FS=0.427;HRun=13;HaplotypeScore=84.6795;InbreedingCoeff=0.8774;MQ=61.64;MQ0=1;MQRankSum=0.469;QD=22.34;ReadPosRankSum=-3.163;VQSLOD=3.7175;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,9:16:39.10:493,39,0	1/1:5,4:10:21.03:240,21,0	0/0:8,0:7:11.46:0,11,76	0/0:3,0:4:8.23:0,8,35	1/1:11,10:22:18.11:454,18,0	0/0:22,0:23:50.33:0,50,419	0/0:23,0:24:17.35:0,17,293	0/0:16,0:20:25.53:0,26,246	0/1:13,0:13:0.68:1,0,161	1/1:6,12:20:50.61:600,51,0	1/1:11,3:14:27.37:271,27,0	1/1:13,4:17:30.03:365,30,0	1/1:5,9:15:38.61:474,39,0	1/1:12,5:18:32.62:377,33,0	0/0:12,0:12:17.80:0,18,158	0/0:17,0:17:26.78:0,27,233	1/1:11,9:22:15.65:546,16,0	0/0:20,0:22:36.28:0,36,348	0/0:14,0:15:23.48:0,23,241	0/0:14,0:17:41.19:0,41,324	0/0:9,0:10:2.75:0,3,70	1/1:3,2:5:7.27:84,7,0	1/1:4,3:8:14.52:155,15,0	1/1:9,6:15:32.55:364,33,0	0/0:10,0:10:29.99:0,30,264	1/1:9,8:19:42.46:505,42,0	1/1:16,8:26:9.15:561,9,0	1/1:1,1:7:5.51:49,6,0
chr10	17455622	.	G	GTTGTT	10389.78	PASS	AB=0.991;AC=30;AF=0.536;AN=56;BaseQRankSum=-8.202;DP=564;FS=1.924;HRun=0;HaplotypeScore=89.8035;InbreedingCoeff=0.8684;MQ=61.16;MQ0=5;MQRankSum=0.575;QD=30.92;ReadPosRankSum=1.785;VQSLOD=4.4147;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:78.27:0,78,1400	1/1:2,4:6:12.04:297,12,0	0/1:28,0:16:2.36:2,0,107	0/1:51,0:34:18.95:22,0,19	1/1:6,19:26:54.18:1485,54,0	1/1:3,11:14:24.08:670,24,0	1/1:19,0:19:24.06:453,24,0	0/0:34,0:34:57.12:0,57,799	0/0:14,0:13:33.11:0,33,584	1/1:6,6:12:21.07:566,21,0	1/1:7,16:24:48.12:1193,48,0	0/0:10,0:10:21.07:0,21,388	0/0:12,0:12:33.11:0,33,610	0/0:15,0:15:39.13:0,39,694	1/1:3,14:17:24.08:682,24,0	1/1:4,11:16:15.05:426,15,0	1/1:7,27:34:48.16:1365,48,0	1/1:15,15:31:38.34:1028,38,0	0/0:20,0:18:30.10:0,30,554	0/0:22,0:21:45.14:0,45,736	0/0:28,0:28:48.13:0,48,796	0/0:11,0:11:27.08:0,27,468	0/0:5,0:5:15.05:0,15,277	0/0:27,0:27:60.16:0,60,1066	1/1:2,12:14:21.07:596,21,0	1/1:9,8:18:27.08:696,27,0	1/1:3,8:12:12.04:341,12,0	1/1:12,0:12:24.08:566,24,0
chr10	17456014	.	C	CGT	4918.43	PASS	AB=0.680;AC=12;AF=0.214;AN=56;BaseQRankSum=-8.891;DP=758;FS=10.920;HRun=0;HaplotypeScore=89.3786;InbreedingCoeff=0.6624;MQ=65.28;MQ0=10;MQRankSum=1.882;QD=19.91;ReadPosRankSum=4.973;VQSLOD=4.4626;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:14,33:47:35.59:1082,36,0	0/0:8,0:9:17.89:0,18,197	0/1:52,0:22:10.48:10,0,152	0/0:43,0:21:20.14:0,20,329	0/0:24,0:24:48.10:0,48,566	0/0:17,0:19:53.78:0,54,596	0/0:37,0:37:78.24:0,78,951	0/0:34,0:36:66.04:0,66,784	0/0:26,0:26:72.21:0,72,863	0/0:23,0:24:62.77:0,63,719	0/0:13,0:13:30.04:0,30,342	0/1:5,14:20:0.47:499,0,0	1/1:2,16:18:39.13:632,39,0	1/1:6,15:20:33.11:535,33,0	0/0:18,0:20:44.80:0,45,501	0/0:26,0:26:63.20:0,63,769	0/0:26,0:28:50.98:0,51,587	0/0:34,0:35:96.11:0,96,1135	0/0:29,0:27:49.68:0,50,611	0/0:16,0:17:35.90:0,36,395	0/0:43,0:45:99:0,117,1385	0/1:4,15:19:6.60:408,0,7	0/1:6,14:19:49.29:268,0,49	1/1:7,42:49:29.05:1484,29,0	0/0:21,0:21:54.17:0,54,656	0/0:23,0:23:60.19:0,60,731	0/0:27,0:27:51.16:0,51,623	0/0:9,0:9:27.08:0,27,330
chr10	17456125	.	TTTTG	T	5886.64	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=6.983;DP=659;FS=4.806;HRun=0;HaplotypeScore=121.4630;InbreedingCoeff=0.9818;MQ=62.48;MQ0=0;MQRankSum=4.823;QD=32.70;ReadPosRankSum=0.982;VQSLOD=4.4577;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,120,2604	1/1:0,11:11:25.91:380,26,0	0/0:16,0:14:14.82:0,15,228	0/0:16,0:12:12.04:0,12,214	1/1:7,24:31:69.15:1042,69,0	0/0:19,0:19:39.13:0,39,904	0/0:26,0:26:54.16:0,54,1173	0/0:34,0:33:75.06:0,75,1453	0/0:23,0:23:45.15:0,45,1033	1/1:6,20:26:60.13:887,60,0	1/1:5,22:27:60.11:918,60,0	0/0:21,0:21:51.16:0,51,1119	0/0:20,0:20:57.15:0,57,1204	0/0:13,0:13:30.09:0,30,637	0/0:28,0:28:48.14:0,48,969	0/0:23,0:23:54.17:0,54,1121	1/1:4,19:23:51.17:830,51,0	0/0:23,0:23:54.14:0,54,1092	0/0:23,0:19:42.14:0,42,936	0/0:30,0:30:72.25:0,72,1705	0/0:15,0:15:27.09:0,27,589	0/0:22,0:22:48.16:0,48,1106	0/0:21,0:21:57.18:0,57,1238	0/0:31,0:31:63.22:0,63,1451	0/0:24,0:24:54.18:0,54,1298	1/1:7,22:29:66.18:1001,66,0	1/1:9,18:27:41.68:682,42,0	1/1:2,4:6:9.03:147,9,0
chr10	17456429	.	C	CACCTT	9892.63	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-8.114;DP=495;FS=24.600;HRun=0;HaplotypeScore=87.7243;InbreedingCoeff=0.9900;MQ=70.82;MQ0=0;MQRankSum=-6.048;QD=79.14;ReadPosRankSum=1.644;VQSLOD=4.2712;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,20:30:69.15:2048,69,0	0/0:6,0:6:18.06:0,18,419	0/0:10,0:10:25.12:0,25,452	0/0:8,0:8:15.05:0,15,338	0/0:7,0:7:21.07:0,21,489	0/0:18,0:18:51.18:0,51,1182	0/0:15,0:15:45.15:0,45,1033	0/0:27,0:27:78.27:0,78,1777	0/0:25,0:25:72.25:0,72,1621	0/0:21,0:21:63.21:0,63,1406	0/0:12,0:11:33.11:0,33,766	1/1:2,14:19:51.18:1693,51,0	1/1:0,12:14:33.11:1098,33,0	1/1:4,15:21:54.19:1790,54,0	0/0:23,0:23:66.23:0,66,1536	0/0:19,0:19:51.18:0,51,1185	0/0:31,0:30:87.30:0,87,1982	0/0:22,0:22:60.17:0,60,1348	0/0:17,0:17:39.12:0,39,840	0/0:10,0:10:27.09:0,27,628	0/0:40,0:40:99:0,114,2481	1/1:3,11:14:36.12:1133,36,0	1/1:1,6:8:18.06:598,18,0	1/1:2,16:19:48.16:1532,48,0	0/0:15,0:15:45.15:0,45,1023	0/0:17,0:17:51.12:0,51,1094	0/0:22,0:22:54.19:0,54,1257	0/0:5,0:5:15.05:0,15,321
chr10	17457487	.	T	TG	2796.89	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=14.735;DP=579;FS=2.720;HRun=1;HaplotypeScore=67.0643;InbreedingCoeff=0.9921;MQ=70.88;MQ0=0;MQRankSum=-2.000;QD=21.35;ReadPosRankSum=2.738;VQSLOD=3.9954;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:26,1:27:61.28:548,61,0	0/0:9,0:9:27.05:0,27,320	0/0:13,0:12:27.08:0,27,317	0/0:21,0:21:10.81:0,11,448	0/0:25,0:25:72.18:0,72,886	0/0:17,0:17:45.12:0,45,552	0/0:17,0:17:51.14:0,51,632	0/0:22,0:22:65.40:0,65,776	0/0:21,0:21:60.17:0,60,736	0/0:32,0:32:87.59:0,88,1090	0/0:23,0:23:63.18:0,63,797	1/1:21,0:21:56.89:503,57,0	1/1:10,2:12:27.02:261,27,0	1/1:17,1:18:43.08:458,43,0	0/0:17,0:17:44.76:0,45,589	0/0:21,0:21:63.16:0,63,761	0/0:25,0:25:66.14:0,66,775	0/0:19,0:19:54.14:0,54,667	0/0:21,0:21:56.57:0,57,678	0/0:27,0:27:78.23:0,78,979	0/0:18,0:18:51.17:0,51,659	1/1:16,1:17:38.94:358,39,0	1/1:18,0:18:53.90:487,54,0	1/1:18,0:18:42.02:381,42,0	0/0:28,0:28:84.16:0,84,1022	0/0:18,0:18:54.16:0,54,664	0/0:33,0:30:86.03:0,86,1066	0/0:21,0:21:63.14:0,63,767
chr10	17457488	.	G	GGT	6469.68	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-11.275;DP=575;FS=2.209;HRun=0;HaplotypeScore=66.2428;InbreedingCoeff=0.9688;MQ=70.89;MQ0=0;MQRankSum=0.287;QD=49.39;ReadPosRankSum=2.097;VQSLOD=6.0005;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,25:27:55.27:1200,55,0	0/0:9,0:9:27.06:0,27,388	0/0:14,0:13:18.19:0,18,418	0/0:21,0:21:3.41:0,3,530	0/0:23,0:24:72.23:0,72,1117	0/0:16,0:16:45.11:0,45,678	0/0:17,0:17:51.17:0,51,793	0/0:22,0:22:63.67:0,64,957	0/0:21,0:21:60.18:0,60,922	0/0:32,0:33:92.28:0,92,1356	0/0:23,0:23:69.16:0,69,1035	1/1:0,19:20:57.20:1129,57,0	1/1:2,10:12:27.04:499,27,0	1/1:3,16:19:46.24:1049,46,0	0/0:16,0:17:50.20:0,50,770	0/0:21,0:21:63.18:0,63,945	0/0:22,0:22:66.19:0,66,973	0/0:19,0:19:54.15:0,54,816	0/0:20,0:21:61.99:0,62,830	0/0:26,0:26:78.24:0,78,1212	0/0:18,0:18:51.16:0,51,823	1/1:1,16:17:38.99:697,39,0	1/1:0,18:18:54.18:1051,54,0	1/1:0,17:18:42.14:846,42,0	0/0:28,0:28:84.22:0,84,1262	0/0:18,0:18:54.16:0,54,811	0/0:31,0:29:95.25:0,95,1380	0/0:21,0:22:63.14:0,63,938
chr10	17458844	.	C	CATAG	7951.57	PASS	AB=0.922;AC=42;AF=0.808;AN=52;BaseQRankSum=-2.899;DP=550;FS=0.000;HRun=0;HaplotypeScore=127.0372;InbreedingCoeff=0.2758;MQ=52.74;MQ0=5;MQRankSum=-1.156;QD=16.19;ReadPosRankSum=0.529;VQSLOD=4.3370;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:28,3:31:31.69:629,32,0	1/1:1,2:3:3.01:70,3,0	./.	./.	0/1:14,8:22:6.16:331,0,6	0/1:25,0:25:30.98:31,0,145	0/1:10,0:10:15.97:16,0,47	0/1:32,0:31:12.48:12,0,41	0/0:15,0:15:36.12:0,36,555	1/1:10,12:21:39.12:849,39,0	1/1:5,10:15:12.04:264,12,0	0/1:17,5:22:2.99:497,0,3	1/1:14,1:15:15.04:292,15,0	1/1:13,3:16:21:417,21,0	1/1:30,0:30:27.09:467,27,0	0/0:25,0:25:4.93:0,5,317	1/1:11,21:32:28.27:706,28,0	1/1:25,0:25:29.65:282,30,0	1/1:22,0:21:19.50:202,20,0	1/1:21,0:21:17.90:219,18,0	0/1:10,0:10:1.10:1,0,9	1/1:8,4:12:18.05:358,18,0	1/1:15,2:17:8.64:314,9,0	1/1:10,1:11:9.03:169,9,0	1/1:23,0:23:18.06:294,18,0	1/1:8,20:28:54.59:1110,55,0	1/1:13,12:26:9.03:209,9,0	1/1:10,7:16:8.90:211,9,0
chr10	17458885	.	A	ATAGATAGG	7284.96	PASS	AB=1.000;AC=38;AF=0.679;AN=56;BaseQRankSum=3.172;DP=610;FS=10.407;HRun=0;HaplotypeScore=166.5292;InbreedingCoeff=-0.0300;MQ=51.60;MQ0=14;MQRankSum=-2.019;QD=13.08;ReadPosRankSum=0.737;VQSLOD=2.7307;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:31,0:35:17.34:346,17,0	0/1:5,0:5:7.63:8,0,41	0/0:19,0:6:15:0,15,140	0/0:13,0:3:5.99:0,6,56	0/1:23,0:22:47.84:48,0,230	0/1:26,0:26:48.85:335,0,49	0/1:8,0:8:29.90:54,0,30	1/1:42,0:34:26.34:486,26,0	0/0:21,0:21:60.10:0,60,1174	0/1:28,0:26:99:193,0,226	0/1:20,0:19:41.13:41,0,99	0/1:15,0:16:43.61:366,0,44	1/1:22,0:22:3.03:145,3,0	1/1:13,0:14:13.30:386,13,0	1/1:1,22:28:27.09:1140,27,0	0/1:27,0:27:99:303,0,169	0/1:37,0:37:99:104,0,193	1/1:18,0:18:39.06:385,39,0	1/1:9,0:14:41.91:486,42,0	1/1:6,24:35:41.68:692,42,0	1/1:8,0:11:20.95:174,21,0	1/1:9,0:9:17.89:262,18,0	1/1:16,0:16:16.08:297,16,0	1/1:14,0:14:5.27:110,5,0	1/1:9,26:40:12.04:527,12,0	0/1:34,0:33:99:323,0,251	0/1:20,0:20:50.81:51,0,120	0/1:14,0:12:23.32:23,0,103
chr10	17458901	.	G	GTAGA	2582.44	PASS	AB=1.000;AC=16;AF=0.286;AN=56;BaseQRankSum=9.684;DP=612;FS=17.702;HRun=0;HaplotypeScore=159.1455;InbreedingCoeff=0.7796;MQ=51.80;MQ0=14;MQRankSum=-6.351;QD=13.59;ReadPosRankSum=-2.068;VQSLOD=2.1130;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:32,3:35:19.11:345,19,0	0/0:3,0:3:6.01:0,6,104	0/0:27,0:14:41.97:0,42,570	0/0:15,0:6:9.57:0,10,109	0/0:27,0:26:68.79:0,69,937	0/0:25,0:25:38.09:0,38,619	0/0:7,0:7:8.78:0,9,138	0/0:39,0:32:72.14:0,72,926	0/0:21,0:21:57.18:0,57,952	0/0:26,0:25:65.76:0,66,937	0/0:24,0:23:33.46:0,33,529	1/1:15,4:19:42.11:816,42,0	1/1:20,1:22:20.97:241,21,0	1/1:11,4:15:27.09:591,27,0	0/1:22,0:22:37.14:37,0,81	0/0:27,0:27:17.32:0,17,678	0/0:37,0:37:64.91:0,65,885	0/0:17,0:17:30.53:0,31,487	0/0:15,0:14:24.04:0,24,324	0/0:35,0:35:42.76:0,43,704	0/0:11,0:11:18.06:0,18,282	1/1:8,3:11:15.03:248,15,0	1/1:12,4:16:20.54:310,21,0	1/1:12,1:13:9.03:180,9,0	0/1:37,0:37:9.90:10,0,234	0/0:33,0:32:72.09:0,72,1038	0/0:18,0:18:30.06:0,30,437	0/0:15,0:13:33.06:0,33,463
chr10	17458910	.	TAG	T	914.08	PASS	AB=0.820;AC=11;AF=0.196;AN=56;BaseQRankSum=8.366;DP=578;FS=1.983;HRun=0;HaplotypeScore=140.9607;InbreedingCoeff=0.5882;MQ=53.77;MQ0=4;MQRankSum=-3.843;QD=7.55;ReadPosRankSum=-0.504;VQSLOD=3.5613;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:28,1:29:10.83:155,11,0	0/0:4,0:4:9.02:0,9,165	0/0:23,0:15:45.11:0,45,727	0/0:14,0:9:23.60:0,24,319	0/0:30,0:29:54.23:0,54,1259	0/0:22,0:22:36.41:0,36,805	0/0:6,1:7:9.50:0,9,166	0/0:33,0:31:90.30:0,90,1597	0/0:23,0:23:66.21:0,66,1161	0/0:23,0:23:69.23:0,69,1230	0/0:24,0:24:51.17:0,51,906	0/1:14,3:17:1.63:314,0,2	1/1:18,2:21:0.75:56,1,0	0/1:13,2:15:21.47:260,0,21	0/0:23,0:23:32.31:0,32,345	0/0:22,0:22:40.90:0,41,860	0/0:36,0:36:72.10:0,72,1269	0/0:18,0:18:20.22:0,20,729	0/0:11,0:11:33.09:0,33,550	0/0:38,0:38:87.23:0,87,1435	0/0:11,0:11:18.06:0,18,328	1/1:10,0:10:8.19:108,8,0	0/1:10,6:16:34.72:85,0,35	1/1:13,0:13:8.86:88,9,0	0/0:37,0:37:29.28:0,29,408	0/0:26,0:25:75.15:0,75,1327	0/0:16,0:16:33.09:0,33,573	0/0:16,0:14:39.13:0,39,660
chr10	17458918	.	AAGAT	A	1523.07	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=7.682;DP=561;FS=0.000;HRun=0;HaplotypeScore=145.1293;InbreedingCoeff=0.9260;MQ=55.58;MQ0=3;MQRankSum=-1.410;QD=13.72;ReadPosRankSum=0.098;VQSLOD=3.2665;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,19:25:19.22:236,19,0	0/0:4,0:4:12.04:0,12,305	0/0:18,0:15:27.09:0,27,526	0/0:14,0:10:20.43:0,20,404	0/0:30,0:29:63.18:0,63,1437	0/0:20,0:20:36.06:0,36,636	0/0:5,0:5:8.98:0,9,176	0/0:38,0:38:96.23:0,96,2040	0/0:20,0:20:48.13:0,48,1110	0/0:23,0:23:57.19:0,57,1382	0/0:25,0:25:57.14:0,57,1271	1/1:16,1:17:36.02:517,36,0	1/1:5,16:21:21:268,21,0	1/1:11,2:13:23.95:332,24,0	0/0:24,0:24:15.05:0,15,268	0/0:20,0:20:45.02:0,45,796	0/0:33,0:33:51.18:0,51,1275	0/0:18,0:18:46.35:0,46,834	0/0:11,0:11:33.09:0,33,760	0/0:41,0:41:78.27:0,78,1906	0/0:11,0:11:21.07:0,21,522	1/1:7,0:7:6.02:104,6,0	1/1:10,6:16:5.84:104,6,0	1/1:12,0:12:9.03:148,9,0	0/0:37,0:37:27.09:0,27,474	0/0:26,0:25:69.19:0,69,1538	0/0:17,0:17:36.12:0,36,891	0/0:15,0:13:36.12:0,36,902
chr10	17458922	.	T	TAA	1220.84	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=10.708;DP=546;FS=5.432;HRun=1;HaplotypeScore=122.8699;InbreedingCoeff=0.9398;MQ=57.09;MQ0=4;MQRankSum=-5.288;QD=11.74;ReadPosRankSum=-3.112;VQSLOD=-0.6633;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:23,1:24:21.91:195,22,0	0/0:4,0:4:12.04:0,12,184	0/0:18,0:13:38.34:0,38,533	0/0:16,0:12:25.69:0,26,331	0/0:29,0:28:66.18:0,66,1049	0/0:19,0:19:37.66:0,38,591	0/0:5,0:5:10.68:0,11,160	0/0:36,0:36:99:0,105,1567	0/0:19,0:19:54.17:0,54,800	0/0:23,0:23:63.20:0,63,942	0/0:25,0:25:58.71:0,59,894	1/1:13,3:16:41.80:504,42,0	1/1:18,2:20:20.40:162,20,0	1/1:12,2:14:26.77:329,27,0	0/0:19,0:19:14.99:0,15,226	0/0:20,0:20:45.05:0,45,658	0/0:32,0:32:57.14:0,57,845	0/0:18,0:18:48.16:0,48,721	0/0:11,0:11:33.11:0,33,505	0/0:43,0:43:83.16:0,83,1254	0/0:10,0:10:18.25:0,18,317	1/1:5,0:5:5.50:42,6,0	1/1:9,5:14:10.45:44,10,0	1/1:11,0:11:8.86:133,9,0	0/0:33,0:33:27.09:0,27,409	0/0:29,0:28:81.25:0,81,1181	0/0:18,0:18:39.12:0,39,575	0/0:15,0:13:36.12:0,36,551
chr10	17458982	.	TATAG	T	1693.36	PASS	AB=0.877;AC=15;AF=0.268;AN=56;BaseQRankSum=7.393;DP=581;FS=22.274;HRun=0;HaplotypeScore=163.7072;InbreedingCoeff=-0.3673;MQ=60.97;MQ0=3;MQRankSum=-1.312;QD=5.52;ReadPosRankSum=-2.943;VQSLOD=0.5505;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:20,2:24:99:113,0,194	0/1:6,1:7:72.17:72,0,158	0/0:20,1:11:26.94:0,27,368	0/0:23,0:12:18.71:0,19,152	0/1:29,10:38:99:250,0,437	0/0:14,0:14:36.11:0,36,868	0/0:9,0:9:27.09:0,27,550	0/0:36,0:31:84.81:0,85,1473	0/0:18,0:18:33.52:0,34,340	0/1:28,5:29:99:446,0,923	0/1:19,10:29:10.71:11,0,344	0/1:11,0:11:28.21:28,0,274	0/1:15,2:17:99:168,0,246	0/1:10,1:11:15.87:16,0,226	0/0:25,0:25:57.18:0,57,1295	0/0:19,0:19:51.16:0,51,1180	0/1:25,1:26:39.98:40,0,574	0/0:23,0:23:8.23:0,8,1014	0/0:21,0:21:62.02:0,62,1180	0/0:35,0:35:66.06:0,66,1206	0/0:15,0:15:39.13:0,39,917	0/1:12,2:13:41.19:41,0,91	0/1:10,3:12:63.40:63,0,122	0/1:7,1:8:38.47:38,0,89	0/0:15,0:15:42.14:0,42,895	0/1:30,6:36:99:316,0,1277	0/1:13,7:20:99:169,0,419	0/1:19,0:19:78.83:79,0,595
chr10	17458986	.	GAGAT	G	389.53	PASS	AB=0.986;AC=4;AF=0.077;AN=52;BaseQRankSum=5.356;DP=579;FS=0.000;HRun=0;HaplotypeScore=170.8260;InbreedingCoeff=0.3093;MQ=61.10;MQ0=3;MQRankSum=-1.655;QD=5.19;ReadPosRankSum=0.488;VQSLOD=2.3977;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:13.14:0,13,146	0/0:7,0:7:5.62:0,6,70	./.	./.	0/0:41,0:40:5.59:0,6,76	0/0:13,0:13:27.09:0,27,640	0/0:10,0:10:18.06:0,18,418	0/1:34,1:30:19.72:20,0,399	1/1:6,13:19:30.10:471,30,0	0/0:33,0:29:19.64:0,20,418	0/0:29,0:29:5.51:0,6,101	0/0:11,0:11:3.46:0,3,25	0/0:17,0:17:16.18:0,16,221	0/0:11,0:11:3.48:0,3,53	0/0:27,0:27:45.15:0,45,1053	0/0:20,0:20:42.14:0,42,979	0/0:25,0:26:12.49:0,12,212	0/0:22,0:22:39.91:0,40,698	0/0:21,0:21:21.07:0,21,495	0/0:32,0:32:20.95:0,21,492	0/0:14,0:14:30.10:0,30,712	0/0:15,0:14:2.75:0,3,24	0/0:13,0:12:5.95:0,6,89	0/0:8,0:8:0.26:0,0,0	0/0:14,0:14:18.06:0,18,416	0/0:37,0:37:35.01:0,35,713	0/1:21,0:21:2.91:3,0,103	0/0:16,0:16:17.80:0,18,176
chr10	17459304	.	GT	G	395.90	PASS	AB=0.816;AC=5;AF=0.089;AN=56;BaseQRankSum=-2.239;DP=509;FS=0.669;HRun=11;HaplotypeScore=121.8103;InbreedingCoeff=-0.0577;MQ=68.45;MQ0=5;MQRankSum=3.321;QD=3.47;ReadPosRankSum=2.227;VQSLOD=0.9291;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:23.09:0,23,151	0/0:4,0:3:5.04:0,5,37	0/0:30,1:19:13.02:0,13,135	0/1:18,2:14:9.45:9,0,112	0/0:29,0:29:48.74:0,49,417	0/0:15,0:15:35.49:0,35,336	0/0:16,0:15:1.13:0,1,173	0/1:27,15:37:50.50:195,0,51	0/0:23,0:22:23.50:0,24,451	0/0:28,0:26:42.34:0,42,362	0/0:12,0:11:15.36:0,15,106	0/0:11,0:11:14.16:0,14,93	0/0:8,0:8:11.61:0,12,77	0/0:18,0:17:19.40:0,19,79	0/0:22,0:22:31.92:0,32,231	0/0:16,0:15:20.10:0,20,150	0/0:27,0:24:40.86:0,41,351	0/0:8,0:8:16.28:0,16,133	0/1:11,8:18:22.12:140,0,22	0/1:17,11:28:7.93:155,0,8	0/0:6,0:5:6.98:0,7,28	0/1:4,0:4:0.08:0,0,12	0/0:5,0:5:5.83:0,6,33	0/0:10,0:9:1.22:0,1,14	0/0:12,0:11:18.66:0,19,139	0/0:36,0:32:59.96:0,60,472	0/0:28,0:28:61.16:0,61,518	0/0:9,0:9:21.63:0,22,162
chr10	17459309	.	T	TTTTTC	2462.72	PASS	AB=0.990;AC=27;AF=0.482;AN=56;BaseQRankSum=13.126;DP=504;FS=43.397;HRun=0;HaplotypeScore=159.7091;InbreedingCoeff=-0.3069;MQ=60.71;MQ0=5;MQRankSum=-8.368;QD=6.05;ReadPosRankSum=-4.004;VQSLOD=-0.4986;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:21:15.34:267,15,0	0/1:4,0:3:38.25:38,0,49	0/0:26,0:14:23.76:0,24,256	0/0:18,0:12:20.95:0,21,280	0/1:30,0:30:44.69:45,0,576	0/0:15,0:15:35.78:0,36,545	0/0:16,0:15:32:0,32,392	0/1:41,0:36:99:111,0,328	0/0:22,0:21:60.12:0,60,928	0/1:28,0:26:99:115,0,466	0/1:9,0:8:61.69:62,0,136	0/1:11,0:11:4.02:154,0,4	1/1:10,0:10:25.83:218,26,0	0/1:13,4:16:3.57:295,0,4	0/1:21,0:21:99:267,0,285	0/1:15,0:14:3.35:3,0,192	0/1:28,0:25:30.85:31,0,538	0/1:9,0:8:58.53:59,0,151	0/1:17,0:15:31.77:32,0,163	0/1:27,0:27:91.05:91,0,185	0/1:7,0:6:8.82:86,0,9	0/1:4,0:4:10.97:39,0,11	1/1:4,0:4:5.83:33,6,0	1/1:9,0:8:8.50:51,9,0	0/1:13,0:11:64.91:65,0,166	0/1:36,0:32:99:198,0,531	0/1:30,0:30:99:187,0,716	0/1:15,0:15:99:187,0,134
chr10	17459671	.	G	GA	1405.21	PASS	AB=0.917;AC=20;AF=0.357;AN=56;BaseQRankSum=0.038;DP=490;FS=12.230;HRun=13;HaplotypeScore=102.4452;InbreedingCoeff=0.2174;MQ=62.59;MQ0=5;MQRankSum=-1.295;QD=4.86;ReadPosRankSum=-2.171;VQSLOD=0.4871;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:28,7:35:60.58:318,0,61	0/0:5,0:5:5.85:0,6,38	0/0:11,0:10:4.17:0,4,34	0/1:12,0:7:0:0,0,0	0/1:19,1:22:28.82:29,0,90	0/0:21,0:22:23.94:0,24,160	0/0:15,0:16:24.99:0,25,155	0/1:24,0:25:32.22:32,0,185	0/1:16,0:16:11.40:11,0,64	0/0:12,0:13:11.58:0,12,66	0/0:16,0:16:20.64:0,21,144	1/1:6,13:19:26.90:229,27,0	1/1:11,4:15:23.73:187,24,0	1/1:6,11:17:22.27:199,22,0	0/0:20,0:20:25.58:0,26,169	0/1:15,0:16:4.04:4,0,87	0/1:30,2:36:8.57:9,0,234	0/1:16,1:18:35.67:36,0,68	0/0:14,0:15:0.65:0,1,104	0/0:19,0:18:1.76:0,2,102	0/1:12,3:15:12.97:13,0,67	1/1:6,2:8:21:186,21,0	1/1:7,11:18:26.66:232,27,0	0/1:8,9:17:5.04:94,0,5	0/0:5,0:6:3.87:0,4,24	0/0:19,0:22:28.73:0,29,167	0/0:19,0:18:14.31:0,14,94	0/0:14,0:16:20.85:0,21,116
chr10	17460152	.	GAT	G	303.83	PASS	AB=0.875;AC=10;AF=0.833;AN=12;BaseQRankSum=-0.151;DP=29;FS=0.000;HRun=0;HaplotypeScore=21.2243;MQ=137.52;MQ0=0;MQRankSum=-1.357;QD=13.81;ReadPosRankSum=-0.050;VQSLOD=2.3772;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/1:6,0:9:50.77:154,0,51	0/1:1,0:3:9.05:38,0,9	./.	./.	./.	./.	1/1:1,1:2:2.94:18,3,0	./.	./.	./.	./.	./.	./.	1/1:1,1:2:5.94:45,6,0	./.	./.	./.	./.	./.	./.	./.	./.	./.	1/1:0,3:3:8.96:76,9,0	./.	1/1:3,0:3:7.79:50,8,0
chr10	17469088	.	C	CT	1519.25	PASS	AB=0.931;AC=17;AF=0.327;AN=52;BaseQRankSum=0.461;DP=615;FS=19.363;HRun=0;HaplotypeScore=184.1133;InbreedingCoeff=0.1143;MQ=30.69;MQ0=11;MQRankSum=-3.541;QD=4.95;ReadPosRankSum=4.125;VQSLOD=1.9066;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,1:25:3.87:0,4,47	0/0:9,2:10:3.62:0,4,12	./.	./.	0/1:24,4:30:9.01:79,0,9	0/0:27,0:27:8.21:0,8,23	0/0:17,0:17:6.25:0,6,98	0/1:18,1:19:60.16:151,0,60	0/0:28,0:28:6.44:0,6,86	1/1:41,7:47:50.36:569,50,0	0/1:20,1:21:12.31:34,0,12	0/0:25,1:26:3.12:0,3,192	0/1:16,2:18:8.84:42,0,9	0/0:24,0:23:12.03:0,12,121	0/1:21,0:21:1.35:1,0,2	0/0:18,0:18:10.13:0,10,159	1/1:10,2:11:3.67:27,4,0	0/0:7,0:7:11.33:0,11,90	0/1:12,2:13:65.39:107,0,65	0/1:42,0:40:8.19:8,0,42	0/0:31,1:32:18.49:0,18,190	0/0:30,0:30:8.02:0,8,71	0/0:28,1:28:12.26:0,12,35	1/1:15,0:15:1.80:7,2,0	0/0:28,0:28:3.71:0,4,14	1/1:28,0:27:26.58:373,27,0	0/1:20,5:26:20.42:255,0,20	0/1:12,0:11:7.15:19,0,7
chr10	17469090	.	C	CT	1848.78	PASS	AB=0.871;AC=16;AF=0.296;AN=54;BaseQRankSum=1.027;DP=645;FS=26.045;HRun=0;HaplotypeScore=182.1780;InbreedingCoeff=0.0199;MQ=31.13;MQ0=13;MQRankSum=-3.864;QD=6.02;ReadPosRankSum=3.983;VQSLOD=1.8844;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,2:27:4.10:0,4,48	0/0:11,0:10:6.32:0,6,21	./.	0/0:6,0:1:3.01:0,3,39	0/1:32,0:32:11.40:23,0,11	0/0:22,5:27:8.79:0,9,25	0/0:15,5:20:6.30:0,6,122	0/1:10,11:21:99:301,0,132	0/0:26,3:29:1.59:0,2,77	1/1:44,7:51:55.76:607,56,0	0/1:21,0:21:6.09:6,0,13	0/1:24,3:27:14.41:14,0,216	0/1:16,2:18:20.78:82,0,21	0/0:20,3:23:12.15:0,12,133	0/1:17,2:21:1.34:1,0,2	0/0:17,1:18:5.48:0,5,157	0/1:11,3:13:9.92:103,0,10	0/0:7,0:7:14.41:0,14,162	0/1:15,1:14:99:110,0,169	0/0:42,1:41:1.53:0,2,51	0/0:27,6:33:21.56:0,22,275	0/0:24,6:30:9.31:0,9,76	0/0:28,2:29:13.61:0,14,40	1/1:13,2:15:1.80:7,2,0	0/0:27,1:28:11.12:0,11,77	1/1:21,10:30:21.93:491,22,0	0/1:18,8:26:29.82:212,0,30	0/1:10,3:12:11.44:42,0,11
chr10	17469108	.	C	CG	105.13	PASS	AB=0.799;AC=4;AF=0.071;AN=56;BaseQRankSum=8.011;DP=682;FS=59.651;HRun=0;HaplotypeScore=189.6895;InbreedingCoeff=0.0719;MQ=34.37;MQ0=15;MQRankSum=-7.498;QD=0.96;ReadPosRankSum=-1.028;VQSLOD=0.8818;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,2:30:23.30:0,23,285	0/0:9,3:11:17.26:0,17,205	0/0:17,0:10:30.05:0,30,375	0/0:18,0:6:15.05:0,15,207	0/0:16,14:30:18.50:0,18,232	0/0:24,3:27:8.32:0,8,100	0/0:20,1:21:38.91:0,39,538	0/0:24,1:24:48.30:0,48,920	0/0:22,2:24:18.33:0,18,214	0/1:33,16:48:99:166,0,818	0/0:13,11:24:12.18:0,12,124	0/0:26,3:29:21.01:0,21,362	0/0:18,1:19:15.93:0,16,243	0/0:24,2:25:27.89:0,28,342	0/1:15,4:19:0.08:0,0,0	0/0:18,0:18:30.99:0,31,415	0/0:18,0:17:18.05:0,18,253	0/0:8,0:8:24.03:0,24,308	0/0:17,0:15:36.12:0,36,502	0/0:30,11:39:14.70:0,15,252	0/0:38,0:36:39.14:0,39,540	0/0:20,9:29:19.50:0,19,360	0/0:21,6:26:25.49:0,25,297	0/0:17,1:18:9.01:0,9,105	0/0:20,9:29:20.32:0,20,224	0/1:26,4:30:25.22:25,0,751	0/0:23,4:27:17.68:0,18,399	0/1:7,4:10:8.82:9,0,116
chr10	17469362	.	AT	A	2135.67	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=-3.194;DP=490;FS=0.504;HRun=3;HaplotypeScore=65.6515;InbreedingCoeff=0.8384;MQ=45.28;MQ0=58;MQRankSum=-0.248;QD=22.72;ReadPosRankSum=-1.465;VQSLOD=2.8130;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:31:72.24:0,72,1029	0/0:6,0:6:15.05:0,15,207	0/1:6,0:3:8.99:9,0,77	0/0:5,0:2:5.63:0,6,30	0/0:17,0:17:39.04:0,39,495	0/0:18,0:18:48.16:0,48,690	0/0:10,0:6:18.06:0,18,259	1/1:10,16:14:41.34:487,41,0	0/0:9,0:8:18.06:0,18,259	0/0:18,0:17:48.16:0,48,690	0/0:18,0:16:36.12:0,36,517	0/0:17,0:17:48.15:0,48,672	0/0:8,0:8:21.07:0,21,302	0/0:10,0:10:27.09:0,27,388	0/0:17,0:14:39.09:0,39,538	0/0:14,0:14:39.13:0,39,559	0/0:29,0:23:66.16:0,66,900	0/0:34,0:22:57.16:0,57,798	1/1:4,24:24:69.21:843,69,0	1/1:1,22:23:57.18:699,57,0	1/1:2,9:10:21.07:260,21,0	0/0:11,0:11:27.09:0,27,379	0/0:14,0:13:36.12:0,36,497	0/0:10,0:6:11.77:0,12,155	0/0:26,0:25:57.11:0,57,810	0/0:20,0:19:54.18:0,54,773	0/0:24,0:23:54.15:0,54,746	0/0:22,0:19:42.14:0,42,581
chr10	17470461	.	CAGAGAGAGAGAG	C	3630	PASS	AB=1.000;AC=14;AF=0.250;AN=56;BaseQRankSum=1.049;DP=764;FS=8.845;HRun=0;HaplotypeScore=264.4251;InbreedingCoeff=0.8177;MQ=59.44;MQ0=20;MQRankSum=-7.408;QD=13.75;ReadPosRankSum=-1.760;VQSLOD=0.7814;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:30:33.56:0,34,802	0/0:8,0:9:18.01:0,18,195	0/1:45,0:18:0:0,0,0	0/1:69,0:29:1.11:1,0,156	0/0:11,0:18:8.50:0,9,123	1/1:14,16:30:13.93:651,14,0	1/1:8,14:23:21.80:450,22,0	0/0:27,0:26:33.10:0,33,769	0/0:13,0:23:15.88:0,16,261	0/0:23,0:32:41.79:0,42,491	0/0:19,0:25:17.19:0,17,247	0/0:32,0:32:40.65:0,41,1191	0/0:28,0:28:41.88:0,42,990	0/0:17,0:17:18.02:0,18,442	1/1:14,16:31:19.21:828,19,0	1/1:11,14:27:8.89:923,9,0	0/0:13,0:25:24:0,24,243	1/1:9,8:16:3.01:104,3,0	0/0:13,0:18:30.06:0,30,814	0/0:24,0:26:24.82:0,25,636	0/0:24,0:24:20.85:0,21,638	0/0:32,0:32:29.90:0,30,671	0/0:26,0:26:26.96:0,27,340	0/0:37,0:35:14.26:0,14,409	1/1:8,14:22:29.09:673,29,0	0/0:15,0:23:45.13:0,45,691	0/0:15,0:31:39.83:0,40,489	0/0:9,0:13:5.83:0,6,163
chr10	17470481	.	G	GAGAGAGAGAGAGAA	5553.45	PASS	AB=1.000;AC=18;AF=0.321;AN=56;BaseQRankSum=-0.480;DP=798;FS=7.839;HRun=0;HaplotypeScore=291.9878;InbreedingCoeff=0.6238;MQ=49.60;MQ0=34;MQRankSum=2.271;QD=18.64;ReadPosRankSum=-1.094;VQSLOD=2.2889;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:37,0:37:25.25:800,25,0	0/0:11,0:10:17.79:0,18,126	0/0:60,0:9:5.53:0,6,56	0/0:98,0:24:15.45:0,15,160	0/0:21,0:21:24.18:0,24,182	0/0:28,0:28:38.83:0,39,623	0/0:28,0:28:25.58:0,26,192	0/0:32,0:29:41.73:0,42,386	0/1:24,0:24:71.83:72,0,125	0/0:24,0:24:41.95:0,42,667	0/0:18,0:17:20.67:0,21,145	1/1:32,0:32:50.61:911,51,0	1/1:22,3:26:53.09:1600,53,0	1/1:18,1:19:26.22:487,26,0	0/0:27,0:27:35.85:0,36,676	0/0:24,0:24:33.08:0,33,954	0/0:27,0:27:29.85:0,30,466	0/0:19,0:18:17.94:0,18,251	0/1:19,0:17:80.44:87,0,80	0/1:23,0:23:46.93:47,0,124	0/1:24,0:22:95.46:137,0,95	1/1:27,1:28:21.85:594,22,0	1/1:24,1:25:22.99:432,23,0	1/1:39,1:38:23.54:387,24,0	0/0:20,0:20:29.67:0,30,390	0/0:23,0:23:62.69:0,63,846	0/0:27,0:27:50.73:0,51,869	0/0:13,0:13:2.51:0,3,139
chr10	17470541	.	G	GAC	7812.07	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-6.426;DP=914;FS=7.997;HRun=0;HaplotypeScore=169.9619;InbreedingCoeff=0.9910;MQ=77.96;MQ0=15;MQRankSum=2.424;QD=35.67;ReadPosRankSum=5.061;VQSLOD=6.0033;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,35:38:78.27:1420,78,0	0/0:17,0:17:51.06:0,51,665	0/0:72,0:47:94.22:0,94,1164	0/0:126,0:68:83.96:0,84,849	0/0:32,0:32:81.26:0,81,1140	0/0:29,0:29:54.18:0,54,772	0/0:29,0:29:69.21:0,69,960	0/0:34,0:33:90.21:0,90,1157	0/0:25,0:25:63.16:0,63,902	0/0:32,0:32:96.16:0,96,1238	0/0:23,0:23:54.16:0,54,753	1/1:1,30:31:72.25:1318,72,0	1/1:5,21:25:10.11:863,10,0	1/1:3,21:24:51.10:915,51,0	0/0:20,0:20:33.09:0,33,452	0/0:26,0:26:66.09:0,66,876	0/0:24,0:24:57.01:0,57,740	0/0:26,0:26:57.17:0,57,793	0/0:24,0:24:66.14:0,66,853	0/0:32,0:32:84.27:0,84,1174	0/0:29,0:29:75.20:0,75,1016	1/1:1,26:27:57.20:1044,57,0	1/1:4,25:29:57.20:1043,57,0	1/1:5,39:44:66.14:1209,66,0	0/0:24,0:24:33.11:0,33,473	0/0:34,0:34:96.18:0,96,1274	0/0:27,0:27:66.15:0,66,913	0/0:9,0:9:24.08:0,24,343
chr10	17470768	.	AGAGACACAGAGAGAGACT	A	4221.29	PASS	AB=0.699;AC=15;AF=0.268;AN=56;BaseQRankSum=12.331;DP=904;FS=7.554;HRun=0;HaplotypeScore=364.1682;InbreedingCoeff=0.7379;MQ=68.47;MQ0=10;MQRankSum=-3.970;QD=20.59;ReadPosRankSum=-3.730;VQSLOD=1.8629;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,105,5184	1/1:2,8:10:2.90:16,3,0	0/0:64,0:25:28.47:0,28,521	0/0:113,0:55:44.85:0,45,780	0/1:3,15:18:0:0,0,0	0/0:22,0:22:48.14:0,48,2310	0/0:30,0:30:51.63:0,52,1901	0/0:37,0:37:69.20:0,69,1902	0/0:29,0:29:72.25:0,72,4628	1/1:5,30:34:81.08:1896,81,0	0/1:4,17:21:0.03:0,0,0	0/0:27,0:27:66.21:0,66,4286	0/0:22,0:22:51.16:0,51,2596	0/0:30,0:30:70.86:0,71,4547	0/0:27,0:27:63.22:0,63,3075	0/0:38,0:38:99:0,102,5907	1/1:6,17:23:2.84:147,3,0	0/1:27,0:27:2.17:2,0,3361	0/0:18,0:17:26.38:0,26,1668	0/0:19,0:19:43.77:0,44,2520	0/0:52,0:52:99:0,116,6262	0/0:23,0:23:36.41:0,36,2635	0/0:24,0:24:48.35:0,48,2543	0/0:46,0:45:96.14:0,96,5394	0/0:23,0:23:36.58:0,37,2029	1/1:1,30:31:78.20:1864,78,0	1/1:7,22:29:3.01:148,3,0	1/1:2,9:11:3.01:148,3,0
chr10	17471791	.	TGAGGCGGGGC	T	3591.06	PASS	AC=14;AF=0.259;AN=54;BaseQRankSum=8.761;DP=551;FS=15.427;HRun=0;HaplotypeScore=162.0950;InbreedingCoeff=0.9310;MQ=75.85;MQ0=0;MQRankSum=-9.679;QD=33.88;ReadPosRankSum=2.567;VQSLOD=2.0489;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:51.17:0,51,2291	1/1:3,7:10:11.90:320,12,0	0/0:13,0:13:24.06:0,24,792	0/0:17,0:17:34.91:0,35,1071	1/1:5,5:10:3.01:94,3,0	0/0:18,0:18:51.16:0,51,2273	0/0:25,0:25:51.17:0,51,2103	0/0:16,0:16:30.10:0,30,1124	0/0:17,0:17:33.11:0,33,1428	1/1:15,13:28:36.12:1094,36,0	./.	0/0:38,0:38:87.75:0,88,3847	0/0:25,0:25:51.17:0,51,2149	0/0:24,0:24:48.16:0,48,2087	0/0:20,0:20:37.01:0,37,1745	0/0:9,0:9:24.08:0,24,1042	1/1:8,13:21:24.08:714,24,0	0/0:38,0:38:99:0,105,5071	0/0:18,0:18:30.09:0,30,1110	0/0:11,0:11:18.06:0,18,650	0/0:48,0:48:99:0,105,4492	0/0:11,0:11:14.63:0,15,572	0/0:9,0:9:18.04:0,18,619	0/0:43,0:43:99:0,114,5350	0/0:10,0:10:24.08:0,24,879	1/1:7,6:13:24.07:617,24,0	1/1:5,7:12:6.01:188,6,0	1/1:5,7:12:18.06:564,18,0
chr10	17472401	.	C	CA	8244.04	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-11.808;DP=723;FS=7.357;HRun=7;HaplotypeScore=86.9000;InbreedingCoeff=0.9989;MQ=83.28;MQ0=0;MQRankSum=-1.153;QD=31.11;ReadPosRankSum=0.417;VQSLOD=4.5744;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:64,0:64:99:0,174,1648	0/0:8,0:8:24.04:0,24,232	0/0:22,0:22:39.04:0,39,370	0/0:21,0:21:29.02:0,29,304	0/0:20,0:20:51.07:0,51,492	1/1:1,23:24:66.20:797,66,0	1/1:2,27:29:72.22:870,72,0	1/1:9,20:29:60.13:694,60,0	0/0:26,0:26:66.10:0,66,637	0/0:22,0:22:45.06:0,45,435	0/0:15,0:15:39.06:0,39,377	0/0:26,0:26:72.08:0,72,687	0/0:40,0:40:99:0,111,1069	0/0:29,0:29:75.10:0,75,719	1/1:2,29:31:81.25:979,81,0	1/1:1,32:33:87.27:1051,87,0	0/0:34,0:34:93.13:0,93,891	1/1:0,17:17:51.16:615,51,0	1/1:2,24:26:72.20:849,72,0	1/1:3,12:15:36.11:432,36,0	1/1:2,39:41:99:1377,114,0	0/0:22,0:22:54.08:0,54,520	0/0:20,0:20:51.08:0,51,492	0/0:31,0:31:87.13:0,87,840	1/1:2,18:20:48.15:580,48,0	0/0:27,0:27:69.10:0,69,666	0/0:24,0:24:66.10:0,66,637	0/0:7,0:7:21.03:0,21,203
chr10	17473031	.	C	CCCGGCGTGTGAG	19063.44	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-6.701;DP=678;FS=5.326;HRun=0;HaplotypeScore=214.5223;InbreedingCoeff=0.9971;MQ=88.64;MQ0=0;MQRankSum=-16.357;QD=135.20;ReadPosRankSum=1.887;VQSLOD=4.8398;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:56:99:0,160,5648	0/0:6,0:6:18.06:0,18,651	0/0:28,0:28:75.21:0,75,2404	0/0:26,0:26:72.22:0,72,2308	0/0:11,0:11:30.10:0,30,959	1/1:5,7:13:27.09:1653,27,0	1/1:13,18:35:93.15:5241,93,0	0/0:33,0:33:93.24:0,93,2664	0/0:26,0:26:75.24:0,75,2757	0/0:21,0:21:60.21:0,60,2277	0/0:7,0:7:21.06:0,21,710	0/0:26,0:26:78.26:0,78,2850	0/0:32,0:32:96.32:0,96,3523	0/0:31,0:31:90.29:0,90,3321	1/1:8,15:25:62.71:3548,63,0	1/1:10,14:26:69.24:4062,69,0	0/0:18,0:18:51.16:0,51,1779	1/1:9,11:21:39.13:2395,39,0	0/0:27,0:27:81.26:0,81,2682	0/0:13,0:13:36.12:0,36,1364	0/0:53,0:53:99:0,150,5340	0/0:13,0:13:39.13:0,39,1411	0/0:13,0:13:39.13:0,39,1477	0/0:40,0:40:99:0,114,4219	1/1:6,10:21:38.62:2164,39,0	0/0:23,0:23:69.24:0,69,2551	0/0:21,0:21:57.20:0,57,2142	0/0:13,0:13:36.12:0,36,1148
chr10	17473246	.	G	GT	11992.18	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=6.784;DP=565;FS=17.559;HRun=1;HaplotypeScore=71.3204;InbreedingCoeff=0.9554;MQ=93.54;MQ0=0;MQRankSum=-4.335;QD=40.51;ReadPosRankSum=4.994;VQSLOD=3.1619;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,34:36:96.33:1437,96,0	1/1:1,9:10:24.08:359,24,0	0/0:27,0:27:78.18:0,78,982	0/0:24,0:24:21.38:0,21,633	1/1:3,15:18:42.14:628,42,0	0/0:13,0:13:39.13:0,39,506	0/0:25,0:25:66.20:0,66,841	0/0:19,0:19:54.18:0,54,701	1/1:1,24:25:66.22:987,66,0	1/1:0,16:16:48.16:718,48,0	1/1:0,7:7:21.07:314,21,0	1/1:0,14:14:39.13:584,39,0	1/1:0,20:20:57.17:852,57,0	1/1:0,30:30:81.27:1213,81,0	0/0:18,0:18:45.15:0,45,583	0/0:15,1:16:3.11:0,3,486	1/1:1,22:23:60.20:899,60,0	0/0:23,0:23:66.21:0,66,856	0/0:14,0:14:41.90:0,42,491	0/0:2,0:2:6.02:0,6,78	0/0:75,0:75:99:0,223,2772	1/1:0,13:13:36.12:539,36,0	1/1:0,5:5:12.04:180,12,0	1/1:1,34:35:96.33:1438,96,0	0/0:13,0:13:39.13:0,39,502	1/1:0,20:20:60.20:899,60,0	1/1:0,11:11:26.98:404,27,0	1/1:1,12:13:36.12:539,36,0
chr10	17473380	.	T	TC	4726.96	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-4.274;DP=254;FS=4.373;HRun=6;HaplotypeScore=38.6397;InbreedingCoeff=0.7100;MQ=73.87;MQ0=0;MQRankSum=-2.800;QD=21.10;ReadPosRankSum=2.889;VQSLOD=3.8791;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,13:17:20.20:361,20,0	1/1:1,3:4:6.02:72,6,0	0/0:4,0:4:11.97:0,12,100	0/0:10,0:9:20.41:0,20,192	1/1:1,4:5:11.62:101,12,0	1/1:2,6:8:15.05:186,15,0	1/1:10,13:23:30.04:357,30,0	1/1:3,10:13:26.98:280,27,0	0/0:16,0:16:33.06:0,33,333	1/1:1,5:6:12.02:133,12,0	1/1:4,1:5:6.01:62,6,0	1/1:2,11:13:30.10:372,30,0	1/1:1,9:10:24.08:299,24,0	1/1:0,11:11:21.07:260,21,0	1/1:0,6:6:12.04:146,12,0	1/1:3,3:6:9.03:110,9,0	1/1:2,7:9:20.85:235,21,0	1/1:3,4:7:12.04:148,12,0	1/1:1,3:4:12.04:145,12,0	1/1:1,2:3:5.98:57,6,0	1/1:5,22:27:48.15:593,48,0	1/1:2,3:5:9.03:112,9,0	1/1:1,2:3:3.01:34,3,0	1/1:5,7:12:15.05:182,15,0	1/1:4,7:11:13.28:150,13,0	1/1:3,4:7:11.90:108,12,0	1/1:0,4:4:9.03:111,9,0	1/1:2,3:5:9.03:110,9,0
chr10	17476497	.	GCCTGATGT	G	8241.38	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=14.434;DP=728;FS=6.449;HRun=0;HaplotypeScore=180.5125;InbreedingCoeff=0.9997;MQ=87.23;MQ0=0;MQRankSum=-15.655;QD=59.72;ReadPosRankSum=3.467;VQSLOD=4.1786;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,132,5410	0/0:17,0:17:51.15:0,51,1951	0/0:28,0:28:80.33:0,80,2607	0/0:25,0:25:65.74:0,66,2103	0/0:25,0:25:69.19:0,69,2643	1/1:0,15:15:27.02:696,27,0	1/1:3,22:25:54.19:1526,54,0	0/0:23,0:23:66.23:0,66,2858	0/0:26,0:26:75.26:0,75,3235	0/0:27,0:27:75.26:0,75,3271	0/0:14,0:14:33.11:0,33,1377	0/0:38,0:38:99:0,111,4833	0/0:21,0:21:57.20:0,57,2471	0/0:25,0:25:75.26:0,75,3228	1/1:2,30:32:72.25:2033,72,0	1/1:0,19:19:45.15:1272,45,0	0/0:38,0:38:99:0,108,4649	1/1:3,18:21:36.12:1018,36,0	0/0:23,0:23:57.20:0,57,2373	0/0:19,0:19:54.19:0,54,2293	0/0:58,0:58:99:0,166,6917	0/0:27,0:27:81.28:0,81,3538	0/0:13,0:13:33.11:0,33,1418	0/0:35,0:35:99:0,99,4167	1/1:2,24:26:60.21:1696,60,0	0/0:24,0:24:72.22:0,72,2865	0/0:22,0:22:63.22:0,63,2700	0/0:16,0:16:48.16:0,48,1835
chr10	17477962	.	GCAGCAC	G	19278.59	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=19.051;DP=734;FS=1.256;HRun=0;HaplotypeScore=172.2229;InbreedingCoeff=0.9988;MQ=88.66;MQ0=1;MQRankSum=-20.334;QD=54.46;ReadPosRankSum=1.964;VQSLOD=4.9099;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,24:30:42.14:992,42,0	1/1:2,7:9:18.06:425,18,0	0/0:38,0:38:99:0,102,3394	0/0:28,0:28:75.69:0,76,2316	1/1:2,17:19:45.15:1059,45,0	0/0:15,0:15:42.14:0,42,1480	0/0:32,0:32:93.32:0,93,3177	0/0:23,0:23:69.24:0,69,2348	0/0:34,0:33:99:0,99,3481	1/1:3,24:27:69.21:1572,69,0	1/1:0,15:15:36.12:844,36,0	1/1:3,34:37:84.29:1982,84,0	1/1:2,28:30:72.25:1701,72,0	1/1:0,35:35:99:2339,99,0	0/0:36,0:36:99:0,108,3766	0/0:31,0:31:90.31:0,90,2957	1/1:2,20:22:45.05:1008,45,0	0/0:22,0:22:60.21:0,60,2065	0/0:16,0:16:45.15:0,45,1544	0/0:30,0:30:84.29:0,84,2985	0/0:55,0:55:99:0,160,5578	1/1:1,26:27:69.24:1623,69,0	1/1:2,19:21:48.16:1126,48,0	1/1:4,17:21:36.12:850,36,0	0/0:20,0:20:60.19:0,60,2057	1/1:2,28:30:87.30:2056,87,0	1/1:3,17:20:42.14:992,42,0	1/1:0,11:11:30.10:709,30,0
chr10	17479269	.	A	ACC	1246.67	PASS	AB=0.842;AC=39;AF=0.750;AN=52;BaseQRankSum=-3.141;DP=201;FS=8.574;HRun=10;HaplotypeScore=42.0143;InbreedingCoeff=0.3244;MQ=83.47;MQ0=0;MQRankSum=-2.646;QD=7.25;ReadPosRankSum=0.410;VQSLOD=-0.7415;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:11:5.96:45,6,0	1/1:4,0:4:5.98:46,6,0	0/0:14,0:14:16.96:0,17,120	0/0:10,0:10:16.86:0,17,158	1/1:6,0:6:6.01:59,6,0	1/1:5,0:9:5.37:24,5,0	0/1:10,8:21:2.07:266,0,2	0/1:10,0:12:3.29:3,0,25	1/1:6,0:6:3.01:31,3,0	1/1:2,0:1:3.01:44,3,0	1/1:2,0:2:2.60:10,3,0	1/1:5,0:5:7.08:56,7,0	1/1:8,0:8:3:25,3,0	1/1:8,0:8:12.02:139,12,0	1/1:2,10:12:9.03:128,9,0	1/1:1,4:6:9.75:81,10,0	0/1:5,0:5:0.01:0,0,0	1/1:5,9:16:23.02:259,23,0	0/1:5,0:6:3.12:3,0,25	0/0:2,0:2:3:0,3,31	0/1:3,0:12:1.47:84,0,1	1/1:5,0:5:3:26,3,0	./.	0/1:2,0:2:0:0,0,0	1/1:3,3:6:2.97:20,3,0	1/1:2,0:2:3:28,3,0	0/1:5,0:4:0:0,0,0	./.
chr10	17479688	.	GCGGCAGTA	G	4338.27	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=9.351;DP=649;FS=2.270;HRun=0;HaplotypeScore=171.6960;InbreedingCoeff=0.9984;MQ=85.57;MQ0=0;MQRankSum=-8.594;QD=42.53;ReadPosRankSum=-3.147;VQSLOD=3.9320;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,111,4506	0/0:15,0:15:45.06:0,45,1702	0/0:22,0:22:59.37:0,59,2185	0/0:26,0:26:72.20:0,72,2339	0/0:18,0:18:54.19:0,54,2038	0/0:25,0:25:72.25:0,72,3145	0/0:33,0:33:99:0,99,4143	1/1:1,28:29:69.01:1458,69,0	0/0:11,0:11:33.11:0,33,1422	0/0:17,0:17:51.18:0,51,2197	0/0:14,0:14:42.10:0,42,1629	0/0:37,0:37:99:0,111,4601	0/0:23,0:23:69.24:0,69,2886	0/0:31,0:31:93.28:0,93,4026	0/0:27,0:27:81.28:0,81,3459	0/0:22,0:22:66.23:0,66,2853	0/0:41,0:41:99:0,123,5036	0/0:20,0:20:60.21:0,60,2625	1/1:0,19:19:54.02:1188,54,0	1/1:0,12:12:30.10:826,30,0	1/1:4,38:42:30.48:866,30,0	0/0:11,0:11:33.11:0,33,1402	0/0:8,0:8:24.08:0,24,1042	0/0:41,0:41:99:0,120,5153	0/0:9,0:9:27.05:0,27,1037	0/0:28,0:28:81.28:0,81,3560	0/0:21,0:21:60.21:0,60,2649	0/0:9,0:9:27.09:0,27,1050
chr10	17480226	.	CCTGT	C	2041.25	PASS	AB=0.950;AC=20;AF=0.357;AN=56;BaseQRankSum=1.104;DP=579;FS=4.095;HRun=0;HaplotypeScore=121.7744;InbreedingCoeff=0.1332;MQ=75.54;MQ0=7;MQRankSum=0.303;QD=7.79;ReadPosRankSum=5.970;VQSLOD=2.1525;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:28:99:355,0,124	0/1:0,9:9:11.98:40,0,12	0/0:49,0:26:67.76:0,68,1538	0/0:33,0:24:65.54:0,66,1446	1/1:13,0:12:3.01:35,3,0	0/0:19,0:19:9.03:0,9,143	0/0:33,0:33:7.98:0,8,256	0/0:14,0:14:36.11:0,36,592	0/1:24,0:24:24.37:72,0,24	0/1:24,0:24:2.46:311,0,2	1/1:10,0:10:3.01:33,3,0	0/1:16,0:16:25.72:176,0,26	0/1:20,0:20:58.46:293,0,58	0/0:25,0:25:12.91:0,13,164	0/0:18,0:18:3.08:0,3,259	0/0:16,0:16:23.93:0,24,384	0/1:27,0:27:3.99:132,0,4	0/0:22,0:22:61.70:0,62,1260	0/0:15,0:15:41.61:0,42,613	0/0:14,0:14:28.93:0,29,371	0/0:39,0:39:62.46:0,62,956	0/1:12,0:12:41:41,0,136	0/1:17,0:17:66.56:175,0,67	0/1:34,0:34:99:203,0,433	0/0:20,0:20:12:0,12,179	1/1:16,0:16:29.99:240,30,0	1/1:11,0:11:5.72:81,6,0	1/1:1,0:1:3:25,3,0
chr10	17480229	.	G	GTC	1111.51	PASS	AB=0.773;AC=12;AF=0.214;AN=56;BaseQRankSum=-3.934;DP=596;FS=33.247;HRun=0;HaplotypeScore=120.7936;InbreedingCoeff=0.5851;MQ=72.80;MQ0=7;MQRankSum=-1.330;QD=7.03;ReadPosRankSum=-1.487;VQSLOD=1.5161;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:65.19:0,65,548	0/0:9,0:9:2.94:0,3,18	0/0:46,0:23:47.53:0,48,496	0/0:33,0:24:53.86:0,54,525	0/0:2,0:13:2.84:0,3,14	1/1:2,1:22:2.59:78,3,0	1/1:9,30:39:7.06:153,7,0	0/0:13,0:13:19.90:0,20,239	0/0:23,0:23:25.10:0,25,123	0/0:2,0:22:44.56:0,45,310	0/0:0,0:10:2.84:0,3,14	0/0:13,0:15:29.38:0,29,231	0/0:20,0:20:51.28:0,51,421	0/0:7,0:28:17.86:0,18,176	1/1:2,16:18:15.04:231,15,0	0/1:3,15:18:5.61:239,0,6	0/0:4,0:26:14.20:0,14,70	1/1:22,2:24:44.96:457,45,0	0/0:14,0:14:28.81:0,29,224	0/0:14,0:14:26.51:0,27,197	0/0:40,0:40:50.77:0,51,398	0/0:13,0:13:5.18:0,5,167	0/0:18,0:18:30.35:0,30,248	0/0:35,0:36:80.32:0,80,764	1/1:4,20:25:2.30:98,2,0	0/0:0,0:15:31.32:0,31,214	0/1:11,0:11:8.48:12,0,8	0/0:1,0:1:2.99:0,3,24
chr10	17480230	.	TCTCTCA	T	4377.92	PASS	AB=0.947;AC=25;AF=0.446;AN=56;BaseQRankSum=-4.489;DP=596;FS=3.217;HRun=0;HaplotypeScore=130.7899;InbreedingCoeff=0.2792;MQ=71.17;MQ0=7;MQRankSum=0.717;QD=15.10;ReadPosRankSum=3.889;VQSLOD=4.3249;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:28:99:784,0,133	1/1:9,0:9:3.01:37,3,0	0/0:44,0:21:61.95:0,62,1107	0/0:33,0:24:49.44:0,49,1088	1/1:13,1:13:2.84:14,3,0	0/0:22,0:22:9.03:0,9,171	0/0:40,0:40:24:0,24,340	0/0:14,0:14:41.93:0,42,376	1/1:23,0:24:26.99:338,27,0	1/1:21,0:21:53.73:770,54,0	1/1:10,0:10:2.84:14,3,0	0/1:16,0:16:3.86:201,0,4	0/1:19,0:19:99:468,0,122	0/0:27,0:27:19.30:0,19,256	0/0:20,0:19:21.03:0,21,338	0/0:18,0:18:21.94:0,22,371	1/1:24,1:27:14.54:170,15,0	0/0:24,0:24:62.24:0,62,1071	0/1:13,0:13:18.56:19,0,256	0/1:15,0:15:59.84:60,0,120	0/0:38,0:38:56.11:0,56,481	0/1:13,0:14:99:106,0,114	0/1:17,0:17:61.17:325,0,61	0/1:36,0:36:99:408,0,517	0/0:26,0:26:18.03:0,18,261	1/1:15,0:15:30.60:545,31,0	0/1:1,10:11:3.50:69,0,3	1/1:1,0:1:3.01:49,3,0
chr10	17480232	.	TCTCACACA	T	2035.60	PASS	AB=0.971;AC=20;AF=0.357;AN=56;BaseQRankSum=-3.501;DP=617;FS=2.160;HRun=0;HaplotypeScore=156.8631;InbreedingCoeff=-0.0863;MQ=70.51;MQ0=8;MQRankSum=-0.711;QD=6.40;ReadPosRankSum=1.703;VQSLOD=2.8402;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:35,0:35:99:323,0,590	1/1:9,0:9:2.96:19,3,0	0/0:44,0:21:56.98:0,57,541	0/0:33,0:24:24.87:0,25,463	0/0:13,0:12:3.01:0,3,36	0/0:22,0:22:9.03:0,9,233	0/0:42,0:42:19.10:0,19,449	0/0:14,0:14:3:0,3,44	1/1:2,21:24:27.09:740,27,0	0/1:20,0:20:23.79:242,0,24	0/0:10,0:10:3.01:0,3,37	0/1:18,0:18:39.89:40,0,362	0/1:19,0:19:99:165,0,459	0/0:32,0:32:33.11:0,33,923	0/0:20,0:19:18.06:0,18,483	0/0:19,0:19:3.15:0,3,539	0/1:27,0:27:64.44:64,0,94	0/0:24,0:24:65.97:0,66,960	1/1:10,0:11:5.85:70,6,0	0/1:8,0:15:21.27:30,0,21	0/1:37,0:38:19.21:19,0,62	0/1:18,0:17:4.26:4,0,523	0/1:18,0:18:99:130,0,301	0/1:38,0:38:99:143,0,1497	0/0:26,0:26:17.98:0,18,366	0/1:15,0:15:65.39:152,0,65	0/1:12,0:12:34.20:34,0,36	1/1:1,0:1:2.99:24,3,0
chr10	17480952	.	TTCCCCATCAC	T	2901.92	PASS	AB=0.595;AC=7;AF=0.125;AN=56;BaseQRankSum=10.556;DP=585;FS=2.657;HRun=0;HaplotypeScore=171.6557;InbreedingCoeff=0.8266;MQ=81.23;MQ0=0;MQRankSum=-7.036;QD=41.46;ReadPosRankSum=-4.082;VQSLOD=2.9734;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:90.17:0,90,4374	0/0:4,0:4:12.04:0,12,647	0/0:18,0:18:54.15:0,54,2257	0/0:16,0:16:45.15:0,45,1869	0/0:15,0:15:45.15:0,45,2427	0/0:13,0:13:39.13:0,39,2053	0/0:23,0:23:66.23:0,66,3494	0/1:7,15:22:99:984,0,1065	0/0:22,0:22:66.21:0,66,3138	0/0:22,0:22:66.23:0,66,3367	0/0:11,0:11:33.11:0,33,1582	0/0:25,0:25:75.26:0,75,3921	0/0:21,0:21:63.22:0,63,3314	0/0:28,0:28:81.24:0,81,3908	0/0:24,0:24:72.25:0,72,3596	0/0:19,0:19:57.20:0,57,2759	0/0:34,0:33:99:0,102,5049	0/0:39,0:39:99:0,114,5331	1/1:0,10:10:30.08:629,30,0	1/1:0,7:7:21.07:651,21,0	1/1:1,30:31:44.87:786,45,0	0/0:16,0:16:48.16:0,48,2328	0/0:13,0:13:39.12:0,39,1960	0/0:39,0:39:99:0,117,5967	0/0:22,0:22:63.15:0,63,3253	0/0:30,0:30:86.88:0,87,4303	0/0:15,0:15:45.15:0,45,2356	0/0:15,0:15:45.15:0,45,2427
chr10	17481355	.	C	CA	725.95	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-2.481;DP=731;FS=1.800;HRun=4;HaplotypeScore=92.4782;InbreedingCoeff=0.9967;MQ=82.46;MQ0=0;MQRankSum=-3.014;QD=33.00;ReadPosRankSum=1.286;VQSLOD=4.0135;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,108,1225	0/0:16,0:16:42.10:0,42,466	0/0:22,0:22:63.12:0,63,665	0/0:23,0:23:62.31:0,62,648	0/0:26,0:26:66.18:0,66,746	0/0:25,0:25:75.20:0,75,840	0/0:27,0:27:75.21:0,75,851	0/0:43,0:43:99:0,109,1203	1/1:1,21:22:60.20:821,60,0	0/0:23,0:23:66.17:0,66,737	0/0:12,0:12:30.08:0,30,340	0/0:34,0:34:96.27:0,96,1088	0/0:25,0:25:69.18:0,69,773	0/0:33,0:33:96.25:0,96,1078	0/0:39,0:39:99:0,114,1293	0/0:26,1:27:31.15:0,31,732	0/0:41,0:41:99:0,117,1317	0/0:25,0:25:69.15:0,69,769	0/0:12,0:12:33.09:0,33,374	0/0:17,0:17:45.13:0,45,510	0/0:30,0:30:75.21:0,75,851	0/0:14,0:14:39.11:0,39,441	0/0:9,0:9:24.07:0,24,271	0/0:36,0:36:99:0,99,1123	0/0:25,0:25:72.21:0,72,817	0/0:37,0:37:99:0,105,1166	0/0:18,0:18:45.13:0,45,510	0/0:29,0:29:87.25:0,87,987
chr10	17481657	.	AGGAT	A	1116.11	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.560;DP=637;FS=1.854;HRun=0;HaplotypeScore=108.1143;InbreedingCoeff=0.9988;MQ=88.10;MQ0=0;MQRankSum=-2.958;QD=50.73;ReadPosRankSum=2.361;VQSLOD=4.6656;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:84.26:0,84,2309	0/0:9,0:9:27.09:0,27,782	0/0:30,0:30:87.18:0,87,2163	0/0:15,0:15:45.11:0,45,1049	0/0:33,0:33:96.23:0,96,2541	0/0:18,0:18:54.19:0,54,1563	0/0:20,0:20:60.21:0,60,1738	0/0:42,0:42:99:0,120,3125	1/1:0,22:22:60.14:1211,60,0	0/0:26,0:26:78.25:0,78,2051	0/0:28,0:28:84.29:0,84,2412	0/0:20,0:20:60.21:0,60,1650	0/0:19,0:19:57.18:0,57,1588	0/0:13,0:13:39.12:0,39,1068	0/0:17,0:17:42.14:0,42,1176	0/0:13,0:13:39.13:0,39,1128	0/0:27,0:27:81.26:0,81,2257	0/0:17,0:17:51.14:0,51,1406	0/0:15,0:15:45.13:0,45,1102	0/0:31,0:31:93.09:0,93,2432	0/0:16,0:16:48.16:0,48,1314	0/0:21,0:21:63.22:0,63,1739	0/0:22,0:22:66.19:0,66,1696	0/0:14,0:14:42.14:0,42,1163	0/0:27,0:27:78.26:0,78,2080	0/0:43,0:43:99:0,129,3710	0/0:28,0:28:84.29:0,84,2394	0/0:23,0:23:69.24:0,69,1984
chr10	17481725	.	CA	C	2796.74	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=5.015;DP=615;FS=0.392;HRun=8;HaplotypeScore=69.6102;InbreedingCoeff=0.9780;MQ=73.01;MQ0=0;MQRankSum=-0.818;QD=22.55;ReadPosRankSum=1.839;VQSLOD=4.2237;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:69.21:0,69,833	0/0:10,0:10:30.09:0,30,362	0/0:16,0:16:37.84:0,38,397	0/0:12,0:11:6.32:0,6,130	0/0:22,0:22:57.17:0,57,687	1/1:2,10:12:27.04:261,27,0	1/1:1,19:20:48.08:464,48,0	0/0:22,0:56:99:0,121,1017	0/0:21,0:21:57.17:0,57,689	0/0:20,0:20:51.15:0,51,610	0/0:23,0:23:63.17:0,63,739	0/0:23,0:23:66.17:0,66,768	0/0:22,0:22:60.18:0,60,725	0/0:14,0:14:42.07:0,42,477	1/1:0,18:18:42.07:406,42,0	1/1:1,14:15:39.06:377,39,0	0/0:16,0:16:42.10:0,42,489	1/1:0,9:9:27.04:261,27,0	0/0:4,0:17:37.17:0,37,186	0/0:6,0:31:78.03:0,78,428	0/0:5,0:22:40.22:0,40,205	0/0:22,0:22:66.20:0,66,797	0/0:20,0:20:54.17:0,54,652	0/0:6,0:6:18.06:0,18,217	1/1:5,45:50:99:1217,126,0	0/0:40,0:40:99:0,105,1267	0/0:37,0:37:96.26:0,96,1135	0/0:15,0:15:39.12:0,39,470
chr10	17481827	.	C	CAAGG	22256.26	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-16.901;DP=692;FS=0.000;HRun=0;HaplotypeScore=96.3611;InbreedingCoeff=0.9996;MQ=78.71;MQ0=2;MQRankSum=-3.830;QD=59.19;ReadPosRankSum=3.782;VQSLOD=6.6123;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,21:26:57.14:1412,57,0	1/1:1,9:11:30.10:768,30,0	0/0:18,0:18:42.13:0,42,684	0/0:17,0:17:39.13:0,39,646	1/1:6,25:32:72.15:1701,72,0	0/0:29,0:29:69.24:0,69,1228	0/0:32,0:32:87.25:0,87,1487	0/0:39,0:39:93.28:0,93,1524	0/0:26,0:26:75.26:0,75,1335	1/1:6,21:28:69.20:1665,69,0	1/1:4,18:23:45.15:1153,45,0	1/1:3,28:31:66.23:1702,66,0	1/1:1,23:25:63.22:1624,63,0	1/1:0,21:22:60.21:1547,60,0	0/0:22,0:22:66.23:0,66,1149	0/0:23,0:23:66.20:0,66,1118	1/1:5,26:31:69.24:1777,69,0	0/0:19,0:19:54.19:0,54,961	0/0:18,0:18:42.13:0,42,718	0/0:27,0:27:63.20:0,63,1086	0/0:20,0:20:51.17:0,51,908	1/1:2,22:26:63.22:1626,63,0	1/1:3,16:20:42.14:1083,42,0	1/1:2,27:30:69.24:1780,69,0	0/0:26,0:26:72.21:0,72,1175	1/1:2,18:22:57.17:1415,57,0	1/1:4,32:36:93.32:2383,93,0	1/1:0,9:9:24.08:619,24,0
chr10	17483603	.	G	GACA	21066.23	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-13.861;DP=622;FS=14.174;HRun=0;HaplotypeScore=84.1171;InbreedingCoeff=0.9776;MQ=89.54;MQ0=0;MQRankSum=-6.697;QD=47.77;ReadPosRankSum=3.306;VQSLOD=6.1542;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,34:39:75.21:1563,75,0	1/1:0,5:5:15.05:328,15,0	0/0:25,0:25:51.15:0,51,783	0/0:26,0:26:69.23:0,69,1082	1/1:3,14:17:31.31:614,31,0	0/0:18,0:18:54.17:0,54,828	0/0:27,0:27:69.23:0,69,1077	1/1:7,16:24:51.18:1098,51,0	1/1:2,19:21:48.16:1018,48,0	1/1:8,21:29:63.07:1362,63,0	1/1:1,13:14:28.30:547,28,0	1/1:1,27:29:81.28:1770,81,0	1/1:1,25:26:69.24:1507,69,0	1/1:6,27:33:69.24:1476,69,0	0/0:18,0:18:51.15:0,51,777	0/0:28,0:28:81.25:0,81,1259	1/1:2,36:40:99:2118,99,0	0/0:21,0:21:63.21:0,63,996	1/1:3,7:11:24.07:479,24,0	1/1:2,14:16:39.06:762,39,0	1/1:7,32:40:77.89:1629,78,0	1/1:4,17:21:39.09:807,39,0	1/1:1,6:7:9.03:196,9,0	1/1:4,20:24:53.98:1180,54,0	0/0:18,0:18:48.16:0,48,747	1/1:3,19:23:63.19:1318,63,0	1/1:0,17:18:51.18:1113,51,0	1/1:1,3:4:9.03:181,9,0
chr10	17484376	.	CG	C	2957.93	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=7.975;DP=658;FS=1.896;HRun=4;HaplotypeScore=70.9119;InbreedingCoeff=0.9913;MQ=89.30;MQ0=0;MQRankSum=-3.861;QD=29.88;ReadPosRankSum=-0.949;VQSLOD=3.3897;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,117,1503	0/0:4,0:4:12.04:0,12,168	0/0:29,0:29:66.69:0,67,946	0/0:37,0:37:99:0,99,1349	0/0:29,0:29:84.26:0,84,1138	0/0:22,0:22:63.21:0,63,881	0/0:19,0:19:54.18:0,54,755	1/1:0,21:21:60.17:708,60,0	0/0:18,0:18:54.16:0,54,720	0/0:22,0:22:60.20:0,60,827	0/0:11,0:11:30.10:0,30,419	0/0:23,0:23:66.22:0,66,923	0/0:21,0:21:60.18:0,60,814	0/0:16,0:16:48.15:0,48,653	0/0:31,0:31:90.28:0,90,1226	0/0:23,0:23:63.20:0,63,865	0/0:39,0:39:99:0,108,1510	0/0:28,0:28:77.99:0,78,1055	1/1:1,21:22:60.18:719,60,0	1/1:1,25:26:66.20:791,66,0	1/1:2,28:30:75.23:900,75,0	0/0:17,0:17:51.17:0,51,714	0/0:19,0:19:54.18:0,54,754	0/0:35,0:35:99:0,105,1447	0/0:17,0:17:39.11:0,39,527	0/0:27,0:27:78.23:0,78,1070	0/0:17,0:17:51.16:0,51,697	0/0:15,0:15:45.15:0,45,630
chr10	17485019	.	G	GTT	2238.43	PASS	AB=1.000;AC=33;AF=0.589;AN=56;BaseQRankSum=5.743;DP=379;FS=10.461;HRun=10;HaplotypeScore=88.0253;InbreedingCoeff=0.8622;MQ=61.12;MQ0=10;MQRankSum=-6.337;QD=12.30;ReadPosRankSum=-2.861;VQSLOD=0.4172;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,1:17:26.43:231,26,0	1/1:11,0:12:23.94:215,24,0	0/0:16,0:8:11.88:0,12,106	0/0:14,0:6:5.62:0,6,21	1/1:13,0:13:26.42:210,26,0	0/0:21,0:20:29.46:0,29,356	0/0:24,0:24:44.77:0,45,437	0/0:20,0:21:18.61:0,19,295	1/1:9,1:10:17.83:166,18,0	1/1:11,1:17:28.19:261,28,0	1/1:4,0:6:8.92:69,9,0	1/1:4,0:9:11.75:97,12,0	1/1:6,0:6:14.95:154,15,0	1/1:6,4:10:9:110,9,0	0/0:16,0:17:12.98:0,13,284	0/0:15,0:14:21.66:0,22,259	1/1:10,0:11:21.44:183,21,0	0/0:19,0:18:25.01:0,25,332	0/0:22,0:20:45.62:0,46,439	0/1:14,0:13:3.11:3,0,136	0/0:14,0:14:14.93:0,15,143	1/1:2,0:5:5.97:48,6,0	1/1:6,0:12:20.88:165,21,0	1/1:5,1:7:14.04:117,14,0	0/0:13,0:13:20.96:0,21,213	1/1:4,0:12:20.35:166,20,0	1/1:4,2:7:17.92:186,18,0	1/1:4,2:5:6.01:73,6,0
chr10	17485038	.	GTT	G	1206.77	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-4.766;DP=421;FS=17.881;HRun=14;HaplotypeScore=66.3794;InbreedingCoeff=0.8017;MQ=43.31;MQ0=39;MQRankSum=4.431;QD=10.87;ReadPosRankSum=6.512;VQSLOD=0.4673;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:22:45.44:0,45,450	0/0:10,0:9:15:0,15,170	0/0:13,0:4:0:0,0,0	0/0:12,0:2:2.80:0,3,13	0/0:17,0:16:15:0,15,186	1/1:4,13:17:31.21:312,31,0	1/1:8,16:22:40.63:392,41,0	0/0:12,0:18:28.39:0,28,267	0/0:7,0:11:16.73:0,17,166	0/0:24,0:22:28.02:0,28,352	0/0:6,0:6:5.91:0,6,54	0/0:9,0:9:12.13:0,12,94	0/0:3,0:8:15.49:0,15,150	0/0:6,0:8:11.35:0,11,87	1/1:5,8:15:16.29:156,16,0	1/1:4,5:11:23.18:188,23,0	0/0:18,0:12:21.76:0,22,227	1/1:15,9:17:4.82:177,5,0	0/0:21,0:27:61.04:0,61,548	0/0:8,0:11:20.94:0,21,188	0/0:4,0:7:6.01:0,6,71	0/0:8,0:6:8.92:0,9,66	0/0:9,0:10:17.74:0,18,207	0/0:11,0:12:11.13:0,11,119	1/1:7,8:14:11.85:156,12,0	0/0:15,0:15:26.54:0,27,235	0/0:12,0:13:19.04:0,19,217	0/0:7,0:5:5.60:0,6,83
chr10	17486375	.	AAAAAAAAAAAAAAAAG	A	990.31	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=1.887;DP=527;FS=1.191;HRun=0;HaplotypeScore=198.3250;InbreedingCoeff=0.7987;MQ=48.10;MQ0=38;MQRankSum=-2.042;QD=58.25;ReadPosRankSum=2.709;VQSLOD=3.5440;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:24:21.07:0,21,582	0/0:4,0:2:6.02:0,6,128	0/0:43,0:8:21.01:0,21,502	0/0:29,0:8:14.93:0,15,181	0/0:21,0:19:51.13:0,51,1888	0/0:12,0:12:30.10:0,30,1462	0/0:21,0:21:33.83:0,34,1370	0/0:36,0:32:80.34:0,80,3144	1/1:2,15:17:26.64:1084,27,0	0/0:23,0:22:57.20:0,57,2369	0/0:17,0:17:48.59:0,49,1684	0/0:12,0:12:36.11:0,36,1732	0/0:17,0:14:35.15:0,35,1335	0/0:9,0:9:27.02:0,27,1297	0/0:14,0:14:27.53:0,28,1043	0/0:16,0:15:36.12:0,36,2016	0/0:24,0:20:32.65:0,33,2162	0/0:25,0:23:57.16:0,57,2918	0/0:22,0:20:48.16:0,48,2354	0/0:14,0:13:33.11:0,33,1800	0/0:5,0:5:12.51:0,13,552	0/0:6,0:6:12.04:0,12,674	0/0:14,0:14:34:0,34,1373	0/0:16,0:16:9.20:0,9,1099	0/0:22,0:21:61.05:0,61,2771	0/0:21,0:20:57.20:0,57,2333	0/0:20,0:17:51.17:0,51,2106	0/0:20,0:18:45.13:0,45,1899
chr10	17487052	.	GAGAGAGAGAGAGAGAGAGAGA	G	2731.01	PASS	AB=1.000;AC=24;AF=0.462;AN=52;BaseQRankSum=2.811;DP=460;FS=10.557;HRun=0;HaplotypeScore=144.0864;InbreedingCoeff=-0.0381;MQ=35.94;MQ0=68;MQRankSum=-0.576;QD=9.16;ReadPosRankSum=-3.667;VQSLOD=0.2953;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:11:23.05:23,0,301	0/0:6,0:5:3.01:0,3,66	./.	./.	0/1:17,0:14:55.15:55,0,227	1/1:18,1:15:24.07:509,24,0	1/1:12,0:10:17.18:399,17,0	0/1:17,0:13:19.15:19,0,219	0/1:15,0:10:23.05:23,0,335	0/1:12,0:6:20.07:20,0,280	0/0:12,0:8:9.03:0,9,255	0/0:23,0:16:0.93:0,1,881	0/1:10,0:6:29.07:29,0,126	0/0:20,0:12:19.62:0,20,374	1/1:3,20:21:12.04:694,12,0	1/1:2,11:11:6.02:347,6,0	0/1:25,0:16:20.88:21,0,682	1/1:17,0:13:21.07:377,21,0	0/0:12,0:9:5.55:0,6,400	0/1:15,0:13:60.52:61,0,192	0/1:19,0:13:71.51:72,0,319	0/1:21,0:6:26.06:26,0,238	0/0:23,0:20:14.93:0,15,372	0/0:25,0:15:18.06:0,18,367	1/1:11,0:7:12.04:165,12,0	0/0:20,0:14:39.13:0,39,960	0/1:18,0:10:41.22:41,0,139	0/1:9,0:7:21.80:22,0,301
chr10	17487063	.	AGAGAG	A	456.40	PASS	AB=0.917;AC=8;AF=0.143;AN=56;BaseQRankSum=5.898;DP=466;FS=15.764;HRun=0;HaplotypeScore=71.7856;InbreedingCoeff=0.2692;MQ=35.60;MQ0=84;MQRankSum=-4.370;QD=4.96;ReadPosRankSum=3.717;VQSLOD=0.3162;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:10:15.01:0,15,161	0/0:6,0:4:5.75:0,6,48	0/0:14,0:4:8.82:0,9,88	0/0:25,0:5:15.05:0,15,189	0/0:13,0:10:21.05:0,21,242	0/1:15,1:11:74.37:74,0,186	0/1:8,3:9:99:158,0,123	0/0:9,0:6:14.78:0,15,155	0/0:16,0:11:18.06:0,18,258	0/0:13,0:4:11.06:0,11,108	0/0:14,0:8:17.08:0,17,194	0/0:27,0:18:17.81:0,18,258	0/0:8,0:4:8.76:0,9,85	0/0:19,0:9:6.53:0,7,48	1/1:22,0:20:12.04:153,12,0	1/1:14,0:11:6.02:69,6,0	0/0:25,0:15:19.18:0,19,209	0/1:15,1:11:80.97:81,0,133	0/0:14,0:11:22.74:0,23,386	0/0:14,0:9:8.74:0,9,155	0/0:23,0:15:24.01:0,24,283	0/0:18,0:4:12.02:0,12,143	0/0:22,0:19:11.10:0,11,131	0/0:28,0:13:16.66:0,17,160	0/1:13,0:8:58.35:58,0,126	0/0:19,0:13:38.60:0,39,471	0/0:16,0:7:11.06:0,11,107	0/0:7,0:5:12.79:0,13,97
chr10	17487064	.	GAGAGAGAGA	G	4141.28	PASS	AB=1.000;AC=48;AF=0.857;AN=56;BaseQRankSum=2.013;DP=471;FS=16.627;HRun=0;HaplotypeScore=74.3115;InbreedingCoeff=0.1586;MQ=37.09;MQ0=87;MQRankSum=-0.969;QD=9.68;ReadPosRankSum=2.957;VQSLOD=-0.1239;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:10:8.67:84,9,0	1/1:6,0:4:2.29:37,2,0	0/0:15,0:4:8.86:0,9,94	0/0:27,0:6:1.52:0,2,183	1/1:13,0:10:14.96:190,15,0	1/1:16,0:11:24.06:324,24,0	1/1:11,0:9:18.49:189,18,0	1/1:10,0:7:9.03:113,9,0	0/1:16,0:11:10.90:67,0,11	1/1:13,0:4:6.02:80,6,0	1/1:14,0:8:12.03:175,12,0	1/1:27,1:19:29.77:459,30,0	1/1:8,0:4:3.01:38,3,0	1/1:17,0:7:8.39:91,8,0	1/1:22,0:20:12.04:281,12,0	1/1:14,0:11:6.02:140,6,0	1/1:25,0:15:26.55:404,27,0	1/1:17,0:11:18.52:216,19,0	0/1:16,0:11:37.50:132,0,37	0/1:14,0:9:30.29:67,0,30	0/1:23,0:15:7.49:173,0,7	1/1:18,0:4:8.98:96,9,0	1/1:11,11:19:3.01:78,3,0	1/1:27,0:12:12.04:157,12,0	1/1:13,0:8:14.63:163,15,0	1/1:19,0:13:12.03:152,12,0	1/1:16,0:7:12.04:156,12,0	1/1:6,0:4:8.10:80,8,0
chr10	17487072	.	GA	G	3492.36	PASS	AB=0.616;AC=41;AF=0.732;AN=56;BaseQRankSum=-0.799;DP=473;FS=120.865;HRun=2;HaplotypeScore=45.2886;InbreedingCoeff=0.0510;MQ=40.64;MQ0=95;MQRankSum=4.214;QD=8.98;ReadPosRankSum=2.990;VQSLOD=0.2413;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,14:11:3.11:139,3,0	0/1:4,3:5:3.65:67,0,4	0/0:27,0:8:14.25:0,14,171	0/0:42,0:11:13.43:0,13,323	1/1:5,6:8:14.13:222,14,0	0/1:3,13:11:1.68:219,0,2	0/1:4,10:11:33.21:117,0,33	1/1:4,6:7:11.09:164,11,0	1/1:1,9:5:6.02:76,6,0	0/1:5,7:4:5.17:102,0,5	1/1:7,8:8:14.53:191,15,0	0/1:10,14:15:15.58:289,0,16	1/1:2,6:4:2.08:70,2,0	0/0:9,6:4:0.08:0,0,12	1/1:22,0:20:11.40:58,11,0	1/1:14,0:11:5.68:29,6,0	0/1:10,12:13:47.86:139,0,48	0/1:5,14:12:8.93:203,0,9	1/1:9,10:13:19.57:275,20,0	1/1:7,6:8:8:112,8,0	1/1:5,18:15:21.06:257,21,0	1/1:4,13:3:2.44:70,2,0	1/1:15,1:13:3.01:38,3,0	0/1:8,13:8:8.09:67,0,8	1/1:5,9:9:11.01:150,11,0	1/1:6,8:8:3.21:172,3,0	0/1:6,11:9:2.12:137,0,2	1/1:1,5:4:11.95:131,12,0
chr10	17487260	.	A	AGG	1641.10	PASS	AB=0.886;AC=18;AF=0.321;AN=56;BaseQRankSum=-4.276;DP=553;FS=1.657;HRun=0;HaplotypeScore=114.2473;InbreedingCoeff=-0.3460;MQ=41.54;MQ0=35;MQRankSum=0.662;QD=5.68;ReadPosRankSum=-5.547;VQSLOD=0.4953;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:26,1:24:79.87:80,0,242	0/1:9,0:7:16.76:17,0,93	0/0:41,0:6:1.09:0,1,88	0/0:59,0:6:0:0,0,0	0/1:12,7:19:99:302,0,135	0/0:20,0:18:41.81:0,42,458	0/0:20,0:19:24:0,24,462	0/1:18,0:17:12.15:12,0,130	0/1:22,0:19:26.92:27,0,224	0/1:14,1:13:94.05:94,0,116	0/1:11,2:12:26.08:139,0,26	0/1:16,4:19:99:139,0,165	0/1:5,4:9:67.64:111,0,68	0/1:7,2:9:76.21:86,0,76	0/0:15,0:15:26.74:0,27,309	0/0:19,0:19:44.64:0,45,464	0/1:19,3:17:49.39:174,0,49	0/0:21,0:19:38.83:0,39,423	0/0:23,0:18:41.47:0,41,414	0/0:18,0:18:28.93:0,29,425	0/0:14,0:14:14.06:0,14,148	0/1:10,1:11:44.66:45,0,76	0/1:15,3:17:99:129,0,199	0/1:22,3:24:80.99:81,0,164	0/0:13,0:12:12.65:0,13,257	0/1:18,7:25:99:256,0,257	0/1:19,0:18:21.90:22,0,92	1/1:8,0:7:5.83:86,6,0
chr10	17487595	.	T	TGTTAAA	29897.22	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=-4.597;DP=644;FS=11.872;HRun=0;HaplotypeScore=134.2059;InbreedingCoeff=0.9980;MQ=71.88;MQ0=0;MQRankSum=-19.674;QD=81.91;ReadPosRankSum=-1.414;VQSLOD=5.6441;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,34:44:99:3485,102,0	1/1:1,7:8:24.08:827,24,0	0/0:21,0:21:60.19:0,60,1315	0/0:13,0:14:24.07:0,24,515	1/1:6,17:23:54.57:1264,55,0	0/0:22,0:22:63.20:0,63,1502	0/0:38,0:38:99:0,114,2698	0/0:28,0:28:78.26:0,78,1873	1/1:6,26:32:93.32:3295,93,0	1/1:6,18:27:75.24:2542,75,0	1/1:1,8:11:24.08:609,24,0	1/1:7,19:28:75.22:2321,75,0	1/1:1,17:22:51.18:1813,51,0	1/1:3,16:22:57.20:1949,57,0	0/0:30,0:30:87.28:0,87,2069	0/0:28,0:28:84.27:0,84,2020	1/1:4,15:23:57.20:1737,57,0	0/0:28,0:28:84.27:0,84,1992	0/0:18,0:18:48.12:0,48,1095	0/0:15,0:15:45.15:0,45,1108	0/0:25,0:25:66.23:0,66,1597	1/1:4,13:20:48.16:1349,48,0	1/1:3,11:16:41.77:1210,42,0	1/1:3,10:16:21.07:608,21,0	0/0:12,0:12:36.12:0,36,886	1/1:7,19:27:78.27:2744,78,0	1/1:5,27:36:99:3375,99,0	1/1:2,8:10:21.07:768,21,0
chr10	17489730	.	T	TG	6457.69	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=15.582;DP=777;FS=7.123;HRun=1;HaplotypeScore=84.6466;InbreedingCoeff=0.9661;MQ=78.86;MQ0=0;MQRankSum=-0.185;QD=39.38;ReadPosRankSum=1.070;VQSLOD=5.2754;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,129,1654	0/0:11,0:11:33.11:0,33,428	0/0:19,0:19:51.16:0,51,648	0/0:19,0:19:54.12:0,54,655	0/0:33,0:33:93.25:0,93,1164	1/1:0,17:17:48.16:719,48,0	1/1:0,23:23:57.19:854,57,0	0/0:25,0:25:75.24:0,75,974	0/0:32,0:32:96.31:0,96,1246	0/0:29,0:29:87.28:0,87,1120	0/0:25,0:25:75.23:0,75,959	0/0:36,0:36:99:0,102,1296	0/0:28,0:28:84.26:0,84,1076	0/0:31,0:31:90.29:0,90,1168	1/1:0,45:45:99:1843,123,0	1/1:4,25:28:3.72:1020,4,0	0/0:30,0:30:87.24:0,87,1097	1/1:1,25:26:75.25:1124,75,0	0/0:31,0:31:87.28:0,87,1121	0/0:34,0:34:99:0,99,1285	0/0:42,0:42:99:0,126,1586	0/0:27,0:27:81.25:0,81,1032	0/0:28,0:28:84.24:0,84,1061	0/0:32,0:32:93.29:0,93,1193	1/1:1,23:24:60.20:898,60,0	0/0:24,0:24:72.23:0,72,935	0/0:27,0:27:77.83:0,78,970	0/0:6,0:6:18.06:0,18,234
chr10	17490228	.	A	ATGCGTGTTTGTGTGAGTGCC	6571.20	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-1.897;DP=993;FS=0.446;HRun=0;HaplotypeScore=544.6480;InbreedingCoeff=0.9975;MQ=60.81;MQ0=0;MQRankSum=-6.894;QD=37.98;ReadPosRankSum=-6.279;VQSLOD=0.7280;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,114,5204	0/0:19,0:19:39.12:0,39,1575	0/0:30,0:30:34.46:0,34,614	0/0:37,0:35:33.22:0,33,710	0/0:31,0:31:57.11:0,57,2430	0/0:18,0:18:33.10:0,33,561	0/0:28,0:28:45.10:0,45,797	1/1:42,0:42:84.20:2235,84,0	0/0:35,0:35:78.23:0,78,2848	0/0:43,0:43:96.31:0,96,4016	0/0:23,0:23:45.15:0,45,1984	0/0:48,0:48:99:0,108,4434	0/0:50,0:50:99:0,99,4269	0/0:40,0:40:84.27:0,84,3623	0/0:49,0:49:72.23:0,72,1313	0/0:50,0:49:93.29:0,93,1731	0/0:31,0:31:66.23:0,66,2982	0/0:16,0:16:18.06:0,18,462	1/1:25,0:24:36.01:1352,36,0	1/1:20,15:35:48.08:2134,48,0	1/1:70,0:70:61.09:851,61,0	0/0:43,0:43:87.30:0,87,4062	0/0:20,0:20:45.12:0,45,1843	0/0:46,0:46:90.27:0,90,3845	0/0:30,0:30:48.12:0,48,792	0/0:36,0:36:69.22:0,69,2713	0/0:27,0:27:57.18:0,57,2661	0/0:19,0:19:48.12:0,48,2195
chr10	17490248	.	CTGCGTGTGTGTTTGTG	C	7841.79	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=9.276;DP=935;FS=5.012;HRun=0;HaplotypeScore=429.1194;InbreedingCoeff=0.9455;MQ=62.41;MQ0=1;MQRankSum=-8.641;QD=49.32;ReadPosRankSum=-0.910;VQSLOD=2.4091;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:56:99:0,156,10312	0/0:14,0:14:42.10:0,42,2491	0/0:35,0:33:89.83:0,90,2820	0/0:37,0:33:83.80:0,84,2755	0/0:29,0:29:84.21:0,84,5498	1/1:9,5:14:19.12:823,19,0	1/1:20,7:27:25.13:1076,25,0	0/0:54,0:54:99:0,138,6113	0/0:34,0:34:99:0,99,5799	0/0:42,0:42:99:0,120,7481	0/0:20,0:20:60.20:0,60,3873	0/0:46,0:46:99:0,133,8346	0/0:41,0:41:99:0,117,7496	0/0:42,0:42:99:0,120,8439	1/1:26,15:41:24.60:2161,25,0	1/1:24,16:39:24.57:2085,25,0	0/0:36,0:36:96.28:0,96,5750	1/1:7,4:11:5.41:743,5,0	0/0:23,0:22:60.11:0,60,2432	0/0:31,0:31:69.20:0,69,3882	0/0:72,0:72:99:0,135,5042	0/0:34,0:34:99:0,99,6446	0/0:18,0:18:54.11:0,54,3206	0/0:42,0:42:99:0,111,6280	1/1:19,7:26:4.70:954,5,0	0/0:29,0:29:81.21:0,81,4994	0/0:22,0:22:63.20:0,63,4345	0/0:19,0:19:48.13:0,48,3174
chr10	17490265	.	TGC	T	762.09	PASS	AB=0.815;AC=8;AF=0.143;AN=56;BaseQRankSum=11.494;DP=869;FS=4.754;HRun=0;HaplotypeScore=221.0895;InbreedingCoeff=0.3860;MQ=60.15;MQ0=1;MQRankSum=-9.413;QD=6.87;ReadPosRankSum=2.374;VQSLOD=3.2797;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,150,2991	0/0:14,0:14:39.11:0,39,747	0/0:37,0:33:90.67:0,91,1493	0/0:42,0:38:91.62:0,92,1718	0/0:34,0:34:99:0,102,1944	0/1:8,3:11:15.48:101,0,15	0/1:12,10:22:60.67:132,0,61	0/0:47,0:47:99:0,132,2307	0/0:34,0:34:96.28:0,96,1806	0/0:36,0:36:99:0,105,2076	0/0:21,0:21:57.20:0,57,1152	0/0:47,0:47:99:0,135,2545	0/0:43,0:43:99:0,100,2183	0/0:40,0:40:99:0,114,2277	0/1:25,4:29:66.06:290,0,66	1/1:20,6:25:15.27:250,15,0	0/0:38,0:38:96.47:0,96,1890	0/1:9,1:10:19.48:19,0,120	0/0:27,0:26:73.79:0,74,1249	0/0:26,0:26:69.21:0,69,1325	0/0:68,0:69:99:0,115,2242	0/0:32,0:32:96.33:0,96,1936	0/0:17,0:17:51.15:0,51,952	0/0:34,0:34:87.28:0,87,1717	1/1:10,3:13:7.57:111,8,0	0/0:31,0:31:89.78:0,90,1702	0/0:22,0:22:63.20:0,63,1241	0/0:13,0:13:39.13:0,39,791
chr10	17490268	.	ATG	A	1702.55	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=13.926;DP=890;FS=1.430;HRun=0;HaplotypeScore=223.8141;InbreedingCoeff=0.9686;MQ=60.67;MQ0=1;MQRankSum=-12.633;QD=14.93;ReadPosRankSum=-0.183;VQSLOD=3.5979;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:56,1:57:99:0,143,2379	0/0:14,0:14:33.11:0,33,570	0/0:39,0:35:92.69:0,93,1419	0/0:47,0:41:38.77:0,39,1236	0/0:36,0:36:99:0,105,1779	1/1:6,6:12:20.85:165,21,0	1/1:15,7:22:32.98:299,33,0	0/0:42,0:42:96.07:0,96,1516	0/0:33,0:33:78.27:0,78,1347	0/0:36,0:36:99:0,99,1686	0/0:21,0:21:45.15:0,45,761	0/0:49,0:49:99:0,123,2044	0/0:46,0:46:99:0,105,1754	0/0:40,0:40:99:0,114,1918	1/1:14,15:29:25.78:511,26,0	1/1:10,16:25:54.04:504,54,0	0/0:37,0:37:87.61:0,88,1529	1/1:8,4:12:24.83:227,25,0	0/0:28,0:27:51.93:0,52,816	0/0:26,0:26:69.23:0,69,1145	0/0:72,0:72:96.05:0,96,1913	0/0:32,0:32:81.25:0,81,1340	0/0:18,0:18:51.17:0,51,860	0/0:35,0:35:81.28:0,81,1375	1/1:6,7:13:4.20:177,4,0	0/0:31,0:31:81.16:0,81,1328	0/0:21,0:21:54.18:0,54,932	0/0:16,0:16:48.14:0,48,801
chr10	17490270	.	G	GCA	2378.52	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=15.249;DP=916;FS=4.724;HRun=0;HaplotypeScore=240.9840;InbreedingCoeff=0.8477;MQ=61.18;MQ0=1;MQRankSum=-13.689;QD=14.50;ReadPosRankSum=-2.606;VQSLOD=2.4751;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:58:99:0,150,2398	0/0:13,0:13:36:0,36,582	0/0:42,0:37:92.09:0,92,1505	0/0:47,0:41:83.34:0,83,1364	0/0:37,0:37:99:0,105,1702	1/1:11,3:14:20.44:178,20,0	1/1:22,5:27:54.90:778,55,0	0/0:42,0:42:68.14:0,68,1493	0/0:33,0:33:44.51:0,45,1276	0/0:37,0:37:99:0,99,1614	0/0:20,0:20:54.08:0,54,862	0/0:47,0:47:99:0,135,2107	0/0:48,0:48:99:0,114,1785	0/0:43,0:43:99:0,117,1879	1/1:23,11:38:42.73:664,43,0	1/1:27,4:30:60.98:442,61,0	0/0:38,0:38:97.86:0,98,1530	1/1:8,4:12:23.17:361,23,0	0/1:26,0:25:35.32:35,0,805	0/0:27,0:27:69.24:0,69,1121	0/0:61,4:67:39.18:0,39,1871	0/0:31,0:31:90.30:0,90,1423	0/0:19,0:19:54.17:0,54,842	0/0:34,0:34:84.29:0,84,1362	1/1:14,2:16:0.58:101,1,0	0/0:32,0:32:84.25:0,84,1331	0/0:21,0:21:60.17:0,60,927	0/0:16,0:16:48.16:0,48,774
chr10	17490308	.	CGTGT	C	2592.30	PASS	AB=0.804;AC=22;AF=0.423;AN=52;BaseQRankSum=0.492;DP=871;FS=4.953;HRun=0;HaplotypeScore=232.2066;InbreedingCoeff=0.5019;MQ=58.53;MQ0=21;MQRankSum=-1.644;QD=6.73;ReadPosRankSum=-1.013;VQSLOD=1.9243;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,1:60:12.81:0,13,943	1/1:8,3:12:8.77:141,9,0	0/0:54,0:25:3.01:0,3,44	./.	1/1:22,12:36:9.02:122,9,0	0/0:15,0:16:21.07:0,21,447	0/0:24,0:27:32.22:0,32,471	1/1:24,0:23:5.81:60,6,0	0/0:20,1:40:42.99:0,43,187	1/1:18,10:29:29.98:412,30,0	0/1:13,3:16:12.74:129,0,13	0/1:23,2:35:79.26:79,0,108	0/0:24,0:42:42.13:0,42,770	0/0:28,0:35:33.11:0,33,642	0/0:39,0:41:35.59:0,36,679	0/1:24,1:30:14.81:15,0,497	1/1:19,17:37:14.86:494,15,0	0/1:17,1:22:7.15:7,0,518	./.	0/1:16,1:20:30.38:30,0,44	1/1:50,19:68:22.05:387,22,0	0/0:16,0:29:27.09:0,27,515	0/0:9,0:19:20.81:0,21,342	0/0:12,0:27:27.09:0,27,515	0/0:15,0:18:26.30:0,26,411	1/1:18,8:29:29.91:407,30,0	1/1:7,8:18:30.08:413,30,0	0/1:5,2:8:3.47:85,0,3
chr10	17490860	.	AGTGTGTGTGT	A	441.51	PASS	AB=0.947;AC=10;AF=0.278;AN=36;BaseQRankSum=-0.651;DP=324;FS=3.177;HRun=0;HaplotypeScore=92.6070;InbreedingCoeff=0.3689;MQ=65.44;MQ0=10;MQRankSum=1.057;QD=5.66;ReadPosRankSum=0.364;VQSLOD=1.6049;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:16,0:10:3.01:0,3,120	0/0:14,0:9:3.01:0,3,79	1/1:6,0:6:3:25,3,0	0/0:6,0:6:6.01:0,6,99	0/0:11,0:11:6.01:0,6,75	0/0:35,0:34:49.98:0,50,1519	0/1:11,0:11:0:0,0,0	1/1:11,5:16:15.05:324,15,0	./.	./.	./.	./.	0/0:15,0:15:15:0,15,150	0/0:11,0:10:12.03:0,12,195	0/1:11,0:15:14.97:15,0,207	0/0:14,0:13:21.89:0,22,376	0/0:17,0:15:11.70:0,12,249	./.	0/0:11,0:11:3.01:0,3,120	./.	0/1:4,0:4:0:0,0,0	./.	0/0:6,0:6:15.03:0,15,182	1/1:7,0:6:3.01:47,3,0	./.	0/1:18,0:18:9.01:144,0,9
chr10	17491105	.	C	CA	3033.61	PASS	AB=0.533;AC=19;AF=0.352;AN=54;BaseQRankSum=10.987;DP=321;FS=12.050;HRun=8;HaplotypeScore=46.1783;InbreedingCoeff=0.8985;MQ=78.41;MQ0=0;MQRankSum=-5.626;QD=24.27;ReadPosRankSum=-0.354;VQSLOD=3.2032;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:60.02:0,60,549	0/0:5,0:5:15.01:0,15,137	0/0:11,0:10:21:0,21,189	0/0:8,0:8:13.89:0,14,126	0/0:8,0:8:17.99:0,18,165	1/1:2,17:19:48.14:554,48,0	1/1:3,8:11:24.07:277,24,0	1/1:1,8:9:24.07:277,24,0	0/0:14,0:14:42.02:0,42,384	0/0:9,0:9:24.01:0,24,220	./.	0/0:11,0:11:30.02:0,30,274	0/0:19,0:19:51.02:0,51,467	0/0:12,0:12:36.02:0,36,329	1/1:3,12:15:30.09:346,30,0	1/1:4,10:14:5.63:319,6,0	0/0:18,0:18:51.03:0,51,467	1/1:1,7:8:15.04:173,15,0	1/1:2,13:15:39.12:450,39,0	1/1:1,8:9:24.07:277,24,0	0/1:1,7:8:2.01:187,0,2	0/0:2,0:2:6:0,6,55	0/0:5,0:5:15:0,15,133	0/0:13,0:13:36.01:0,36,330	1/1:2,15:17:33.10:381,33,0	0/0:11,0:11:24:0,24,220	0/0:23,0:23:69.02:0,69,625	0/0:4,0:4:12.01:0,12,110
chr10	17491874	.	GT	G	4498.29	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=9.961;DP=588;FS=2.138;HRun=4;HaplotypeScore=81.9249;InbreedingCoeff=0.9989;MQ=84.32;MQ0=0;MQRankSum=0.746;QD=33.08;ReadPosRankSum=2.858;VQSLOD=5.5330;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,114,1595	0/0:10,0:10:23.91:0,24,308	0/0:18,0:18:41.62:0,42,536	0/0:19,0:19:50.94:0,51,643	0/0:22,0:22:66.21:0,66,900	1/1:0,27:27:69.21:827,69,0	1/1:1,10:11:27.08:324,27,0	0/0:31,0:31:81.27:0,81,1134	0/0:19,0:19:57.18:0,57,783	0/0:27,0:27:75.25:0,75,1051	0/0:17,0:16:48.13:0,48,637	0/0:15,0:15:45.15:0,45,630	0/0:17,0:17:51.17:0,51,714	0/0:14,0:14:42.10:0,42,565	1/1:0,14:14:42.13:504,42,0	1/1:1,27:28:81.25:972,81,0	0/0:16,0:16:45.15:0,45,628	1/1:0,26:26:72.22:864,72,0	0/0:19,0:19:54.16:0,54,725	0/0:23,0:23:66.21:0,66,906	0/0:26,0:26:72.24:0,72,1008	0/0:24,0:24:69.22:0,69,949	0/0:9,0:9:24.07:0,24,320	0/0:20,0:20:57.19:0,57,797	1/1:2,28:30:84.26:1008,84,0	0/0:13,0:13:39.13:0,39,546	0/0:40,0:39:99:0,117,1638	0/0:12,0:12:36.09:0,36,483
chr10	17492002	.	ATCTATCTG	A	5082.21	PASS	AB=0.931;AC=14;AF=0.250;AN=56;BaseQRankSum=-6.281;DP=741;FS=4.299;HRun=0;HaplotypeScore=256.4306;InbreedingCoeff=0.4609;MQ=65.98;MQ0=0;MQRankSum=-1.585;QD=21.72;ReadPosRankSum=-3.063;VQSLOD=3.5489;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:68.04:0,68,1525	0/0:11,0:11:9.02:0,9,200	0/0:22,0:21:48.09:0,48,971	0/0:21,0:20:41.90:0,42,795	0/0:45,0:45:87.22:0,87,2136	0/1:31,0:30:99:953,0,127	1/1:13,0:13:18.04:370,18,0	1/1:8,27:35:81.20:1483,81,0	0/0:20,0:20:27.37:0,27,681	0/0:39,0:39:99:0,102,2807	0/0:33,0:33:62.39:0,62,1779	0/0:22,0:22:63:0,63,1099	0/0:20,0:20:50.97:0,51,492	0/0:27,0:27:71.93:0,72,789	1/1:28,0:28:18.91:93,19,0	0/1:21,0:21:99:604,0,259	0/0:24,0:24:57.10:0,57,1218	0/1:18,0:18:10.72:16,0,11	0/1:4,10:14:99:452,0,105	0/1:28,0:28:99:711,0,213	0/1:18,0:18:3.60:248,0,4	0/0:36,0:36:56.95:0,57,870	0/0:26,0:26:77.88:0,78,1117	0/0:18,0:18:42.03:0,42,1088	1/1:28,0:28:14.94:153,15,0	0/0:37,0:37:99:0,105,3053	0/0:54,0:53:99:0,108,3060	0/0:17,0:17:48.14:0,48,1303
chr10	17492010	.	GTCTA	G	4209.19	PASS	AB=0.931;AC=15;AF=0.268;AN=56;BaseQRankSum=-2.640;DP=751;FS=2.876;HRun=0;HaplotypeScore=223.7149;InbreedingCoeff=0.3545;MQ=62.86;MQ0=0;MQRankSum=0.181;QD=15.42;ReadPosRankSum=-0.707;VQSLOD=3.3010;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:37.71:0,38,754	0/0:10,0:10:9.02:0,9,128	0/0:20,0:19:43.99:0,44,688	0/0:18,0:17:35.16:0,35,531	0/0:48,0:48:92.36:0,92,1375	0/1:33,0:32:36.98:711,0,37	1/1:15,0:15:17.80:283,18,0	0/1:37,0:37:31.70:925,0,32	0/0:22,0:22:42.40:0,42,485	0/0:40,0:40:82.24:0,82,1790	0/0:33,0:33:58.45:0,58,1101	0/0:23,0:23:27.91:0,28,439	0/0:21,0:21:15.41:0,15,150	0/1:27,0:27:78.88:79,0,226	1/1:0,27:27:24.08:452,24,0	0/1:21,1:22:73.65:453,0,74	0/0:25,0:25:59.50:0,59,781	0/1:4,15:19:10.46:51,0,10	0/1:17,0:16:22.64:301,0,23	0/1:29,0:29:47.20:476,0,47	1/1:17,0:17:15.55:196,16,0	0/0:33,0:33:24:0,24,366	0/0:28,0:28:30.89:0,31,453	0/0:19,0:19:31.05:0,31,632	1/1:2,28:30:15.05:282,15,0	0/0:39,1:40:83.33:0,83,1815	0/0:51,0:50:99:0,109,1798	0/0:16,0:16:48.12:0,48,826
chr10	17492022	.	G	GTCTA	2166.22	PASS	AB=1.000;AC=25;AF=0.446;AN=56;BaseQRankSum=3.800;DP=753;FS=0.507;HRun=0;HaplotypeScore=250.2075;InbreedingCoeff=0.0022;MQ=53.52;MQ0=3;MQRankSum=2.268;QD=4.06;ReadPosRankSum=0.331;VQSLOD=2.4667;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:20.51:0,21,395	0/1:9,0:9:17.98:33,0,18	0/0:12,0:11:30.06:0,30,460	0/0:9,0:8:21.05:0,21,303	0/0:46,0:46:19.46:0,19,165	1/1:34,0:33:10.91:110,11,0	1/1:18,0:18:0.77:20,1,0	0/1:37,0:36:25.43:25,0,258	0/0:25,0:25:36.12:0,36,555	0/1:40,0:40:23.20:23,0,256	0/1:36,0:36:30.03:30,0,137	0/1:23,0:23:20.97:21,0,176	0/1:22,0:22:52.37:52,0,94	0/1:23,0:23:9.33:9,0,155	0/0:30,0:30:29.14:0,29,212	0/1:22,0:22:40:41,0,40	0/1:27,0:26:12.97:204,0,13	0/0:16,0:16:8.74:0,9,68	0/1:23,0:21:99:172,0,133	1/1:32,0:32:25.97:276,26,0	1/1:17,0:17:7.07:46,7,0	1/1:13,18:31:18.35:411,18,0	0/1:30,0:30:38.48:38,0,200	0/0:22,0:22:11.54:0,12,330	0/0:29,0:29:15.87:0,16,83	0/1:42,0:42:96.82:414,0,97	1/1:52,0:51:18.20:386,18,0	0/1:15,0:15:15.09:36,0,15
chr10	17492026	.	GTCTATCTATCTA	G	358.47	PASS	AC=2;AF=0.038;AN=52;BaseQRankSum=-0.659;DP=746;FS=7.949;HRun=0;HaplotypeScore=351.0066;InbreedingCoeff=0.6162;MQ=52.57;MQ0=4;MQRankSum=-3.521;QD=14.34;ReadPosRankSum=0.118;VQSLOD=0.9741;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:66.16:0,66,2534	0/0:9,0:9:3.01:0,3,138	./.	./.	0/0:46,0:46:47.74:0,48,1622	0/0:32,0:31:33.14:0,33,1148	0/0:19,0:19:3.59:0,4,37	0/0:34,0:33:9:0,9,101	1/1:9,16:25:15.05:446,15,0	0/0:43,0:43:75.25:0,75,2890	0/0:36,0:36:35.39:0,35,1305	0/0:23,0:23:42.14:0,42,1580	0/0:21,0:21:25.61:0,26,650	0/0:22,0:22:30.09:0,30,1028	0/0:31,0:31:36.10:0,36,1017	0/0:23,0:23:28.86:0,29,1247	0/0:26,0:25:24.08:0,24,852	0/0:16,0:16:6.02:0,6,176	0/0:24,0:21:24.08:0,24,829	0/0:29,0:29:47.40:0,47,1616	0/0:17,0:17:12.04:0,12,307	0/0:28,0:28:28.49:0,28,1055	0/0:31,0:31:48.16:0,48,1735	0/0:22,0:22:42.13:0,42,2007	0/0:29,0:29:13.88:0,14,448	0/0:42,0:42:75.26:0,75,2856	0/0:52,0:52:84.25:0,84,2707	0/0:15,0:15:24.08:0,24,728
chr10	17492029	.	T	TGTCTGTCT	8849	PASS	AB=1.000;AC=16;AF=0.286;AN=56;BaseQRankSum=-12.734;DP=739;FS=3.578;HRun=0;HaplotypeScore=276.7744;InbreedingCoeff=0.7531;MQ=52.21;MQ0=5;MQRankSum=1.537;QD=30.20;ReadPosRankSum=1.107;VQSLOD=3.8500;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:63.16:0,63,1182	1/1:0,6:8:3.01:116,3,0	0/0:10,0:9:27.01:0,27,363	0/0:6,0:5:15.05:0,15,265	1/1:45,0:45:90.26:1263,90,0	0/0:32,0:31:54.73:0,55,803	0/0:17,0:17:14.99:0,15,218	0/0:39,0:38:72.26:0,72,794	0/0:25,0:25:36.12:0,36,611	1/1:44,0:44:99:1553,99,0	1/1:35,0:35:65.81:1075,66,0	0/0:22,0:22:57.14:0,57,996	0/0:18,0:18:18.21:0,18,500	0/0:23,0:23:44.64:0,45,1080	0/0:30,0:30:13.41:0,13,144	0/0:23,0:23:24.39:0,24,647	0/1:27,0:26:23.61:682,0,24	0/0:16,0:16:3.47:0,3,67	0/1:26,0:22:17.64:18,0,187	0/0:28,0:28:40.59:0,41,582	0/0:17,0:17:11.95:0,12,194	0/0:28,0:28:47.67:0,48,606	0/0:29,0:29:68.72:0,69,1075	0/0:22,0:22:50.76:0,51,907	0/0:30,0:30:14.73:0,15,218	1/1:41,0:41:99:1836,111,0	1/1:53,0:52:99:1724,111,0	1/1:14,0:14:37.36:583,37,0
chr10	17492214	.	A	AT	577.20	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-3.688;DP=671;FS=5.928;HRun=8;HaplotypeScore=74.9377;InbreedingCoeff=0.9597;MQ=72.19;MQ0=0;MQRankSum=-1.648;QD=25.10;ReadPosRankSum=1.135;VQSLOD=4.5148;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:54.03:0,54,494	0/0:10,0:10:24.01:0,24,220	0/0:17,0:17:38.38:0,38,336	0/0:11,0:10:10.81:0,11,75	0/0:41,0:41:99:0,114,1039	0/0:23,0:23:66.02:0,66,598	0/0:19,0:19:51.02:0,51,467	0/0:36,0:36:93.04:0,93,848	1/1:2,20:23:60.01:672,60,0	0/0:37,0:37:99:0,102,933	0/0:19,0:19:51.02:0,51,467	0/0:23,0:23:57.03:0,57,522	0/0:23,0:23:63.03:0,63,577	0/0:16,0:16:45.02:0,45,412	0/0:29,0:29:75.01:0,75,679	0/0:27,0:27:72.03:0,72,659	0/0:17,0:17:45:0,45,405	0/0:25,0:25:69:0,69,624	0/0:20,0:20:51.01:0,51,463	0/0:30,0:30:84.04:0,84,769	0/0:17,0:17:42.02:0,42,384	0/0:20,0:20:57.03:0,57,521	0/0:19,0:19:54.01:0,54,488	0/0:21,0:21:57.02:0,57,522	0/0:33,0:33:84.03:0,84,769	0/0:37,0:37:90.04:0,90,820	0/0:42,0:42:99:0,120,1092	0/0:17,0:17:48.02:0,48,439
chr10	17493170	.	CTTTT	C	2251.04	PASS	AB=0.743;AC=27;AF=0.482;AN=56;BaseQRankSum=5.022;DP=378;FS=0.000;HRun=17;HaplotypeScore=96.9587;InbreedingCoeff=0.4047;MQ=69.36;MQ0=3;MQRankSum=-5.607;QD=10.23;ReadPosRankSum=5.748;VQSLOD=-0.4547;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,17:29:40.22:463,40,0	0/1:3,0:5:29.69:30,0,40	0/0:13,0:6:3.01:0,3,41	0/0:13,0:12:11.96:0,12,113	1/1:5,3:20:19.13:293,19,0	0/0:6,0:9:11.78:0,12,92	0/1:4,1:5:24.97:25,0,69	0/0:18,0:25:32.29:0,32,237	1/1:2,6:8:8.97:95,9,0	0/1:8,1:20:31.66:159,0,32	1/1:10,0:19:26.69:207,27,0	1/1:10,3:14:5.03:154,5,0	1/1:4,7:12:14.87:169,15,0	1/1:12,0:12:4.66:34,5,0	0/0:14,0:19:38.56:0,39,321	0/0:15,0:19:31.65:0,32,342	0/1:8,0:12:25.18:49,0,25	0/0:10,0:13:17.85:0,18,167	0/0:9,0:13:20.83:0,21,184	0/0:9,0:11:10.29:0,10,91	0/0:6,0:6:7.13:0,7,39	0/1:6,2:8:7.26:64,0,7	1/1:5,5:10:15.41:237,15,0	1/1:5,5:11:16.17:182,16,0	0/0:6,0:16:38.89:0,39,252	0/1:5,0:10:19.85:105,0,20	1/1:12,1:18:8.96:169,9,0	0/1:4,0:5:15.24:15,0,18
chr10	17493185	.	TTTGG	T	3976.29	PASS	AB=1.000;AC=41;AF=0.732;AN=56;BaseQRankSum=2.954;DP=355;FS=7.676;HRun=0;HaplotypeScore=90.2878;InbreedingCoeff=0.0934;MQ=51.81;MQ0=5;MQRankSum=0.618;QD=12.16;ReadPosRankSum=1.948;VQSLOD=2.3805;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:25:50.25:574,50,0	1/1:4,0:4:6.81:60,7,0	0/1:7,0:2:0.99:1,0,4	0/0:7,0:6:5.99:0,6,73	1/1:18,0:18:43.58:433,44,0	0/1:11,0:11:3.19:15,0,3	0/1:7,0:7:36.96:37,0,39	0/1:24,0:24:22.39:22,0,66	1/1:9,0:9:10.58:131,11,0	1/1:15,0:15:33.44:286,33,0	1/1:15,0:15:31.18:290,31,0	1/1:14,0:14:26.88:292,27,0	1/1:12,0:12:18.78:200,19,0	1/1:2,6:8:5.45:51,5,0	0/1:18,0:18:28.37:38,0,28	0/1:21,0:21:65.73:82,0,66	1/1:14,0:14:15.39:130,15,0	0/1:12,0:12:28.79:29,0,48	0/0:14,0:15:4.61:0,5,47	0/1:11,0:11:22.42:24,0,22	0/0:6,0:5:1.92:0,2,10	1/1:5,0:5:3.68:81,4,0	1/1:14,0:13:26.94:287,27,0	1/1:12,0:10:20.70:223,21,0	0/1:19,0:19:16.18:16,0,41	1/1:9,0:8:21.03:207,21,0	1/1:19,0:19:45.59:429,46,0	1/1:4,0:4:5.23:37,5,0
chr10	17493187	.	TGGTC	T	2855.70	PASS	AB=0.945;AC=26;AF=0.464;AN=56;BaseQRankSum=5.961;DP=345;FS=63.335;HRun=0;HaplotypeScore=89.9342;InbreedingCoeff=-0.3538;MQ=52.22;MQ0=5;MQRankSum=-0.606;QD=10.06;ReadPosRankSum=4.431;VQSLOD=0.0633;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:23,1:24:19.42:281,19,0	0/1:4,0:4:21.11:47,0,21	0/1:4,0:2:2.59:4,0,3	0/0:7,0:6:5.98:0,6,59	1/1:18,0:18:17.42:381,17,0	0/0:11,0:11:21.78:0,22,143	0/1:8,0:8:50.42:50,0,110	0/1:21,1:22:55.49:55,0,167	0/1:8,1:9:1.64:81,0,2	0/1:15,0:15:5.48:188,0,5	0/1:13,0:13:4.27:233,0,4	0/1:11,2:13:41.31:184,0,41	0/1:11,1:12:20.30:121,0,20	0/1:8,0:8:20.41:28,0,20	0/1:15,0:16:75.68:76,0,138	0/1:19,0:21:99:183,0,198	0/1:13,0:14:8.45:121,0,8	0/1:12,0:13:62.88:63,0,134	0/0:16,0:16:13.71:0,14,176	0/1:10,0:10:43.60:44,0,120	0/0:6,0:6:9.70:0,10,58	0/1:4,0:4:15.32:36,0,15	0/1:12,1:12:24.83:135,0,25	0/1:11,1:10:5.12:126,0,5	0/0:20,0:20:8.28:0,8,150	1/1:9,0:8:3.50:141,3,0	0/1:15,3:18:16.57:413,0,17	0/1:3,0:3:15.96:24,0,16
chr10	17493329	.	G	GA	4554.79	PASS	AC=24;AF=0.600;AN=40;BaseQRankSum=0.969;DP=334;FS=1.567;HRun=9;HaplotypeScore=50.2622;InbreedingCoeff=0.9159;MQ=57.99;MQ0=5;MQRankSum=-0.180;QD=22.77;ReadPosRankSum=-0.907;VQSLOD=5.2061;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	1/1:1,12:13:27.07:299,27,0	0/0:16,0:5:9:0,9,78	0/0:18,0:4:0.83:0,1,22	1/1:1,18:18:51.13:557,51,0	0/0:18,0:18:19.74:0,20,382	0/0:12,0:12:35.99:0,36,312	1/1:17,0:17:36.45:146,36,0	./.	1/1:1,16:18:50.94:525,51,0	1/1:3,26:29:71.87:741,72,0	./.	./.	./.	0/0:13,0:13:38.99:0,39,338	0/0:15,0:15:38.99:0,39,338	1/1:7,21:28:61.62:803,62,0	0/0:18,0:18:35.97:0,36,313	1/1:5,0:4:7.95:32,8,0	1/1:22,0:22:54.04:236,54,0	1/1:6,0:6:10.71:44,11,0	./.	./.	./.	0/0:22,1:23:29.81:0,30,482	1/1:1,10:11:29.76:304,30,0	1/1:11,12:23:62.95:645,63,0	1/1:5,3:8:21.92:221,22,0
chr10	17493332	.	A	AAC	2023.71	PASS	AC=8;AF=0.200;AN=40;BaseQRankSum=-8.490;DP=338;FS=0.596;HRun=0;HaplotypeScore=69.4716;InbreedingCoeff=0.9498;MQ=56.30;MQ0=5;MQRankSum=0.572;QD=38.92;ReadPosRankSum=-0.428;VQSLOD=5.1976;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	0/0:13,0:13:25.03:0,25,104	0/0:15,0:4:9.03:0,9,126	0/0:18,0:4:10.71:0,11,93	0/0:20,0:19:47.45:0,47,190	0/0:18,0:18:53.84:0,54,770	0/0:13,0:13:39.09:0,39,569	1/1:1,17:18:44.96:750,45,0	./.	0/0:19,0:19:24.38:0,24,134	0/0:28,0:28:45.32:0,45,225	./.	./.	./.	0/0:14,0:14:42.13:0,42,623	0/0:14,0:14:42.13:0,42,623	0/0:28,0:28:69.35:0,69,299	0/0:17,0:17:48.07:0,48,643	1/1:1,4:4:12.02:182,12,0	1/1:2,21:23:60.19:1024,60,0	1/1:0,6:6:12.04:212,12,0	./.	./.	./.	0/0:23,0:23:65.58:0,66,953	0/0:12,0:12:31.52:0,32,140	0/0:25,0:24:30.57:0,31,179	0/0:8,0:8:20.89:0,21,96
chr10	17493431	.	C	CT	9069.06	PASS	AB=0.728;AC=35;AF=0.875;AN=40;BaseQRankSum=-7.340;DP=390;FS=9.269;HRun=9;HaplotypeScore=58.2098;InbreedingCoeff=0.4280;MQ=87.22;MQ0=0;MQRankSum=-6.886;QD=24.71;ReadPosRankSum=3.964;VQSLOD=5.3568;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	1/1:1,8:9:21.06:232,21,0	0/0:22,0:22:27.57:0,28,287	0/1:14,0:14:1.36:1,0,160	1/1:1,20:21:51.10:551,51,0	1/1:0,15:15:45.12:498,45,0	0/1:1,6:7:11.02:118,0,11	1/1:9,25:34:75.17:810,75,0	./.	1/1:4,11:15:10.02:328,10,0	1/1:2,27:29:52.15:803,52,0	./.	./.	./.	1/1:1,20:21:56.99:612,57,0	1/1:3,12:15:36.10:398,36,0	1/1:6,25:31:26.10:744,26,0	1/1:2,23:25:46.14:737,46,0	1/1:5,12:17:13.05:372,13,0	0/1:9,11:20:31.87:336,0,32	1/1:0,7:7:21.06:232,21,0	./.	./.	./.	1/1:3,15:18:10.05:339,10,0	1/1:2,25:27:75.20:830,75,0	1/1:4,23:26:69.19:763,69,0	1/1:3,11:14:33.09:365,33,0
chr10	17494445	.	TA	T	2916.27	PASS	AB=0.909;AC=22;AF=0.550;AN=40;BaseQRankSum=1.641;DP=337;FS=18.607;HRun=11;HaplotypeScore=52.8808;InbreedingCoeff=0.8070;MQ=59.59;MQ0=2;MQRankSum=-1.114;QD=15.35;ReadPosRankSum=0.551;VQSLOD=2.3460;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	0/0:10,0:10:27.07:0,27,288	0/0:6,1:6:8.93:0,9,74	0/1:11,1:8:3.81:4,0,101	0/0:31,0:31:72.05:0,72,751	1/1:2,15:17:41.95:345,42,0	1/1:2,15:17:41.94:345,42,0	1/1:3,13:18:43.02:332,43,0	./.	0/0:18,0:18:17.50:0,17,386	0/0:15,1:16:14.46:0,14,359	./.	./.	./.	1/1:1,12:13:35.96:296,36,0	1/1:2,13:15:35.96:296,36,0	0/0:25,0:25:63.12:0,63,660	1/1:4,31:36:66.21:651,66,0	1/1:4,9:12:17.95:148,18,0	1/1:1,13:14:32.95:271,33,0	1/1:0,4:4:8.99:74,9,0	./.	./.	./.	1/1:1,13:13:38.96:320,39,0	0/1:15,2:17:10.20:10,0,298	0/0:29,0:29:78.20:0,78,830	0/0:10,0:10:30.05:0,30,310
chr10	17495030	.	C	CTT	3850.63	PASS	AB=0.574;AC=37;AF=0.841;AN=44;BaseQRankSum=-3.792;DP=363;FS=0.000;HRun=10;HaplotypeScore=87.0547;InbreedingCoeff=0.3497;MQ=63.67;MQ0=4;MQRankSum=-0.457;QD=11.60;ReadPosRankSum=2.141;VQSLOD=1.3577;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,0:2:3:29,3,0	1/1:3,0:7:10.50:71,10,0	0/0:13,0:6:2.97:0,3,54	0/0:18,0:6:14.61:0,15,128	1/1:5,2:15:5.07:136,5,0	0/1:8,3:26:38.56:204,0,39	1/1:7,0:21:32.44:114,32,0	1/1:8,20:28:53.59:679,54,0	./.	1/1:1,0:9:19.96:70,20,0	1/1:0,0:8:14.97:52,15,0	./.	./.	1/1:2,0:2:2.68:11,3,0	1/1:8,0:25:42.04:151,42,0	1/1:3,0:15:27.45:97,27,0	1/1:2,3:30:63.93:327,64,0	1/1:3,1:25:17.59:162,18,0	1/1:10,14:26:50.65:692,51,0	1/1:3,5:8:16.26:196,16,0	1/1:6,20:24:39.60:566,40,0	./.	./.	./.	0/1:2,0:11:5.99:41,0,6	0/1:5,0:18:0.54:85,0,1	1/1:3,1:19:35.45:159,35,0	1/1:2,0:5:2.50:9,2,0
chr10	17495229	.	TA	T	6966.80	PASS	AB=0.833;AC=49;AF=0.942;AN=52;BaseQRankSum=-2.979;DP=312;FS=5.241;HRun=7;HaplotypeScore=30.2074;InbreedingCoeff=0.4724;MQ=63.60;MQ0=3;MQRankSum=-0.996;QD=22.92;ReadPosRankSum=1.828;VQSLOD=4.1497;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,30:31:75.16:762,75,0	1/1:1,5:6:12.02:122,12,0	0/0:5,0:3:6.01:0,6,60	0/1:4,0:3:6.81:7,0,24	1/1:0,14:14:32.96:312,33,0	1/1:1,18:19:48.10:488,48,0	1/1:1,2:3:3.01:31,3,0	1/1:2,26:27:78.11:766,78,0	1/1:0,10:10:24.05:244,24,0	1/1:2,9:11:23.96:212,24,0	1/1:1,7:8:18.04:183,18,0	1/1:0,8:8:18.04:183,18,0	./.	1/1:0,8:8:15.03:152,15,0	1/1:1,12:13:27.06:275,27,0	1/1:6,5:11:27.02:254,27,0	1/1:1,18:19:45.09:457,45,0	1/1:2,17:20:53.04:509,53,0	1/1:2,13:14:39.04:376,39,0	1/1:2,6:8:14.99:142,15,0	1/1:1,9:10:18.04:183,18,0	./.	1/1:2,2:4:6.01:61,6,0	1/1:1,3:4:9.02:92,9,0	1/1:1,12:13:27.06:274,27,0	1/1:2,11:13:35.93:335,36,0	1/1:0,11:11:21.04:213,21,0	1/1:0,12:12:33.07:335,33,0
chr10	17495503	.	CTTTT	C	4427.10	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-0.177;DP=468;FS=10.741;HRun=8;HaplotypeScore=73.7968;InbreedingCoeff=0.8383;MQ=62.74;MQ0=19;MQRankSum=-0.282;QD=15.70;ReadPosRankSum=4.575;VQSLOD=0.8465;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:35,2:37:59.62:737,60,0	0/0:3,0:3:8.99:0,9,129	0/0:44,0:14:17.14:0,17,309	0/0:30,0:11:1.05:0,1,214	0/0:15,0:15:24.01:0,24,316	1/1:6,0:6:9.03:134,9,0	1/1:18,3:20:24.45:340,24,0	1/1:15,2:15:32.55:335,33,0	1/1:16,1:17:9.02:110,9,0	0/0:15,0:16:38.63:0,39,485	0/0:9,0:9:6.73:0,7,141	1/1:22,1:22:20.97:209,21,0	1/1:13,1:13:15.04:181,15,0	1/1:13,1:14:5.74:37,6,0	1/1:14,4:18:36.02:442,36,0	1/1:12,1:13:17.78:181,18,0	0/0:34,0:31:55.65:0,56,839	1/1:17,1:18:9.96:169,10,0	1/1:22,3:23:20.52:714,21,0	1/1:6,1:7:18.05:232,18,0	1/1:16,0:16:15.02:170,15,0	1/1:3,0:3:6.02:81,6,0	1/1:9,0:9:9.43:94,9,0	1/1:14,1:14:8.41:140,8,0	1/1:9,0:9:9.03:122,9,0	0/0:12,0:12:24.67:0,25,281	0/0:11,0:9:12.88:0,13,120	0/0:11,0:10:9.08:0,9,85
chr10	17495509	.	TTTC	T	4825.64	PASS	AB=0.936;AC=45;AF=0.804;AN=56;BaseQRankSum=-1.486;DP=472;FS=35.372;HRun=0;HaplotypeScore=65.7129;InbreedingCoeff=0.1590;MQ=58.19;MQ0=20;MQRankSum=-0.650;QD=12.03;ReadPosRankSum=0.384;VQSLOD=2.1524;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,28:37:63.32:745,63,0	0/1:4,0:4:12.31:12,0,13	0/0:41,0:11:14.20:0,14,139	0/0:29,0:11:11.83:0,12,103	0/1:14,0:14:23.63:75,0,24	1/1:0,9:9:9.03:140,9,0	1/1:7,15:21:35.05:377,35,0	1/1:15,4:15:27.35:234,27,0	1/1:1,14:15:8.99:114,9,0	0/1:20,0:20:21.63:171,0,22	0/1:8,0:8:5.36:40,0,5	1/1:5,17:21:12.76:134,13,0	1/1:3,10:12:15:207,15,0	1/1:3,12:15:3.48:48,3,0	1/1:7,12:19:32.45:359,32,0	1/1:2,10:12:17.92:282,18,0	0/1:31,0:28:64.55:65,0,104	1/1:4,14:18:15.11:142,15,0	1/1:20,3:21:38.09:486,38,0	1/1:4,5:9:17.98:197,18,0	1/1:0,14:14:8.99:106,9,0	1/1:0,3:3:5.97:66,6,0	1/1:1,8:9:11.21:121,11,0	0/1:3,13:15:10.39:100,0,10	1/1:1,9:9:9.03:140,9,0	0/1:13,0:13:8.69:144,0,9	1/1:12,0:10:13.89:131,14,0	1/1:13,0:13:28.75:193,29,0
chr10	17495510	.	TTC	T	4462.68	PASS	AB=1.000;AC=51;AF=0.911;AN=56;BaseQRankSum=-0.673;DP=472;FS=21.549;HRun=0;HaplotypeScore=62.6531;InbreedingCoeff=0.4551;MQ=58.24;MQ0=20;MQRankSum=-0.897;QD=11.13;ReadPosRankSum=0.252;VQSLOD=2.4210;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:33,4:37:62.68:578,63,0	1/1:4,0:4:5:30,5,0	0/0:41,0:11:14.74:0,15,139	0/0:30,0:11:4.20:0,4,82	1/1:14,0:14:6.29:124,6,0	1/1:9,0:9:9.02:99,9,0	1/1:21,1:21:35.04:323,35,0	1/1:18,0:14:28.26:216,28,0	1/1:15,0:15:8.98:86,9,0	1/1:20,0:20:24.66:290,25,0	1/1:8,0:8:8.98:60,9,0	1/1:21,1:21:11.86:86,12,0	1/1:13,0:12:14.68:152,15,0	1/1:14,1:15:3.48:34,3,0	1/1:19,0:19:32.68:273,33,0	1/1:12,0:12:17.68:199,18,0	1/1:32,0:29:8.88:175,9,0	1/1:17,1:18:9.26:116,9,0	1/1:22,1:21:47.90:432,48,0	1/1:8,1:9:17.95:171,18,0	1/1:14,0:14:8.97:79,9,0	1/1:3,0:3:5.96:52,6,0	1/1:8,1:9:13.51:111,14,0	0/1:16,0:15:10.65:66,0,11	1/1:10,0:9:9.02:99,9,0	1/1:12,1:13:20.03:217,20,0	1/1:11,1:11:21.67:148,22,0	1/1:14,0:13:31.93:245,32,0
chr10	17496520	.	A	ATTT	7196.89	PASS	AB=0.553;AC=43;AF=0.768;AN=56;BaseQRankSum=9.872;DP=691;FS=6.853;HRun=9;HaplotypeScore=128.3552;InbreedingCoeff=0.9090;MQ=76.37;MQ0=0;MQRankSum=-1.913;QD=12.94;ReadPosRankSum=4.081;VQSLOD=1.5962;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:41:41.12:88,41,0	1/1:0,1:8:23.93:220,24,0	0/0:15,0:14:17.01:0,17,220	0/0:20,0:20:39.95:0,40,459	1/1:6,0:19:35.75:268,36,0	1/1:2,0:31:81.94:623,82,0	1/1:5,0:23:52.05:393,52,0	0/0:25,0:25:51.12:0,51,644	1/1:1,0:18:41.84:322,42,0	1/1:4,1:28:74.68:605,75,0	1/1:1,1:27:74.41:595,74,0	1/1:6,0:26:23.67:51,24,0	1/1:3,0:22:18.51:39,19,0	1/1:2,0:26:27.05:58,27,0	1/1:3,0:28:59.28:442,59,0	1/1:1,0:27:62.21:474,62,0	1/1:2,0:36:77.49:599,77,0	1/1:4,0:30:68.74:528,69,0	0/0:26,0:26:71.99:0,72,857	0/0:31,0:31:84.24:0,84,1061	0/0:17,0:17:36.04:0,36,452	0/1:4,0:21:7.26:64,0,7	1/1:3,0:26:27.98:62,28,0	1/1:3,0:27:27.41:59,27,0	1/1:2,0:21:52.36:394,52,0	1/1:4,0:26:61.04:471,61,0	1/1:8,0:36:86.65:701,87,0	1/1:0,0:8:19.18:141,19,0
chr10	17497067	.	G	GCC	6839.21	PASS	AB=0.879;AC=47;AF=0.839;AN=56;BaseQRankSum=-2.554;DP=575;FS=0.588;HRun=9;HaplotypeScore=108.9168;InbreedingCoeff=0.4921;MQ=77.89;MQ0=1;MQRankSum=-5.361;QD=13.15;ReadPosRankSum=-0.399;VQSLOD=2.5725;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:23,2:33:23.78:323,24,0	1/1:7,0:7:0.47:1,0,0	0/0:18,0:19:33:0,33,394	0/0:20,0:19:39.07:0,39,404	1/1:20,0:20:37.33:203,37,0	1/1:3,19:23:44.64:655,45,0	1/1:5,28:35:68.20:987,68,0	1/1:13,1:23:20.72:171,21,0	0/1:18,0:18:49.16:49,0,95	1/1:9,0:9:4.30:48,4,0	0/1:13,0:13:0.78:22,0,1	1/1:10,1:30:5.41:197,5,0	1/1:5,0:15:20.76:150,21,0	1/1:11,0:24:26.47:174,26,0	1/1:7,19:31:49.63:672,50,0	1/1:7,28:37:87.18:1274,87,0	1/1:36,0:36:44.86:244,45,0	1/1:0,18:20:32.59:450,33,0	1/1:11,7:20:26.68:242,27,0	1/1:8,0:12:11.80:75,12,0	0/0:6,10:16:0.83:0,1,2	1/1:5,0:11:8.48:47,8,0	0/1:6,0:14:21.79:22,0,26	1/1:5,0:18:14.81:146,15,0	1/1:3,15:19:23.56:313,24,0	1/1:20,0:20:32.79:149,33,0	1/1:22,0:22:34.07:128,34,0	1/1:9,0:9:13.78:97,14,0
chr10	17497076	.	CT	C	4966.49	PASS	AB=0.955;AC=39;AF=0.696;AN=56;BaseQRankSum=-1.336;DP=527;FS=2.166;HRun=1;HaplotypeScore=96.3623;InbreedingCoeff=0.8148;MQ=77.37;MQ0=1;MQRankSum=-3.562;QD=14.87;ReadPosRankSum=-6.008;VQSLOD=2.3107;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:29,1:30:59.78:418,60,0	1/1:0,9:10:3.01:41,3,0	0/0:18,0:18:47.91:0,48,612	0/0:17,0:16:48.14:0,48,618	1/1:7,12:19:48.28:490,48,0	0/0:21,0:21:50.24:0,50,322	0/0:32,0:32:85.89:0,86,576	1/1:21,0:21:37.43:273,37,0	0/1:20,1:21:24.19:120,0,24	1/1:0,10:11:30.75:255,31,0	1/1:0,9:11:14.95:178,15,0	1/1:24,0:24:18.03:113,18,0	1/1:14,0:14:20.33:116,20,0	1/1:19,0:19:25.02:155,25,0	0/0:29,0:29:65.20:0,65,441	0/0:35,0:35:93.03:0,93,631	1/1:14,22:36:88.35:1007,88,0	0/0:24,0:23:15.16:0,15,221	1/1:16,0:16:27:166,27,0	1/1:8,0:8:0.99:31,1,0	1/1:13,0:13:8.86:73,9,0	1/1:6,0:6:7.57:35,8,0	1/1:14,0:14:8.11:113,8,0	1/1:14,0:14:21.74:126,22,0	0/0:17,0:17:40.81:0,41,312	1/1:0,19:19:53.98:553,54,0	1/1:0,21:21:45.02:535,45,0	1/1:7,0:7:20.94:168,21,0
chr10	17497078	.	CT	C	2827.56	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=1.067;DP=553;FS=16.416;HRun=1;HaplotypeScore=107.3741;InbreedingCoeff=0.9508;MQ=75.18;MQ0=1;MQRankSum=-1.999;QD=20.49;ReadPosRankSum=1.794;VQSLOD=2.6321;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:77.37:0,77,623	1/1:11,0:11:3.01:35,3,0	0/0:17,0:17:48.15:0,48,722	0/0:16,0:15:45.11:0,45,653	1/1:16,2:18:37.06:387,37,0	0/0:22,0:22:60.16:0,60,875	0/0:29,0:29:87.30:0,87,1354	0/0:23,0:23:58.11:0,58,493	0/0:22,0:22:58.86:0,59,622	1/1:13,1:14:30.91:297,31,0	1/1:11,0:11:14.95:170,15,0	0/0:30,0:31:47.80:0,48,428	0/0:21,0:21:38.78:0,39,310	0/0:24,0:24:53.50:0,53,421	0/0:28,0:28:75.23:0,75,1127	0/0:34,0:34:96.33:0,96,1497	1/1:34,2:36:86.34:978,86,0	0/0:22,0:21:45.09:0,45,641	0/0:14,0:14:33.52:0,34,241	0/0:10,0:10:11.94:0,12,105	0/0:11,0:11:21.78:0,22,152	0/0:9,0:9:20.92:0,21,186	0/0:13,0:13:31.97:0,32,295	0/0:16,0:16:35.91:0,36,321	0/0:18,0:18:51.14:0,51,741	1/1:18,3:21:54.01:546,54,0	1/1:22,2:24:47.38:542,47,0	1/1:3,0:3:8.98:71,9,0
chr10	17497789	.	TTTTAATTAA	T	9624.56	PASS	AC=30;AF=0.556;AN=54;BaseQRankSum=12.774;DP=390;FS=7.744;HRun=0;HaplotypeScore=146.3908;InbreedingCoeff=0.8709;MQ=54.11;MQ0=0;MQRankSum=-11.859;QD=46.95;ReadPosRankSum=3.083;VQSLOD=4.3082;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,7:11:5.69:377,6,0	1/1:2,5:7:15.05:390,15,0	0/0:3,0:2:2.22:0,2,7	./.	1/1:13,11:24:33.04:753,33,0	0/0:19,0:19:36.12:0,36,1441	0/0:9,0:9:12.04:0,12,491	0/0:29,0:29:54.19:0,54,1870	0/0:10,0:10:27.09:0,27,949	1/1:6,6:12:18.06:513,18,0	1/1:5,19:24:54.18:1410,54,0	1/1:4,12:16:33.11:941,33,0	1/1:1,12:13:33.11:941,33,0	1/1:4,8:12:21.07:562,21,0	0/0:11,0:11:27.09:0,27,1025	0/0:14,0:14:27.09:0,27,961	1/1:9,3:12:12.03:285,12,0	0/0:29,0:29:72.22:0,72,2772	0/0:14,0:14:33.11:0,33,1311	0/0:15,0:15:36.12:0,36,1351	0/0:5,0:5:3.01:0,3,122	1/1:2,0:2:3.01:82,3,0	1/1:3,4:7:9.03:256,9,0	1/1:2,7:9:9.03:183,9,0	0/0:26,0:26:60.21:0,60,2280	1/1:5,21:26:63.13:1627,63,0	1/1:4,17:21:39.13:1046,39,0	1/1:5,4:9:9.03:257,9,0
chr10	17497801	.	T	TC	2635.45	PASS	AB=0.850;AC=17;AF=0.304;AN=56;BaseQRankSum=8.826;DP=394;FS=4.670;HRun=0;HaplotypeScore=104.6680;InbreedingCoeff=0.0214;MQ=54.43;MQ0=0;MQRankSum=-11.531;QD=12.32;ReadPosRankSum=3.251;VQSLOD=4.7554;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:9,0:9:0.54:74,0,1	1/1:5,1:6:15.51:125,16,0	0/0:2,0:1:2.88:0,3,15	0/0:3,0:2:3.01:0,3,41	0/1:17,8:25:99:434,0,100	0/0:17,0:17:48.15:0,48,656	0/0:8,0:8:21.06:0,21,276	0/0:30,0:30:90.27:0,90,1199	0/0:10,0:10:30.10:0,30,419	0/1:8,8:16:23.87:331,0,24	0/1:25,4:29:27.42:414,0,27	0/1:18,2:20:60.81:161,0,61	1/1:13,1:14:5.27:98,5,0	0/1:10,1:11:53.52:110,0,54	0/0:12,0:12:33.08:0,33,427	0/0:12,0:12:36.12:0,36,502	0/1:8,4:12:40.61:146,0,41	0/0:27,0:27:81.27:0,81,1129	0/0:13,0:13:39.13:0,39,545	0/0:18,0:18:54.15:0,54,705	0/0:1,0:1:3.01:0,3,42	0/0:1,0:1:3:0,3,27	0/1:5,1:6:15:57,0,15	1/1:7,1:8:11.25:145,11,0	0/0:26,0:26:72.22:0,72,976	0/1:23,2:25:30.48:306,0,30	0/1:22,3:25:19.12:300,0,19	0/1:6,2:8:60.71:100,0,61
chr10	17498556	.	A	AGG	3774.07	PASS	AB=0.545;AC=35;AF=0.625;AN=56;BaseQRankSum=9.037;DP=680;FS=1.591;HRun=8;HaplotypeScore=114.5388;InbreedingCoeff=0.9108;MQ=84.44;MQ0=1;MQRankSum=-1.992;QD=9.23;ReadPosRankSum=1.510;VQSLOD=0.4552;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,0:42:74.89:262,75,0	0/0:11,0:11:27.06:0,27,301	0/0:45,1:34:43.33:0,43,442	0/0:45,0:31:13.27:0,13,385	0/0:17,0:17:38.81:0,39,403	1/1:4,0:31:47.41:163,47,0	1/1:3,0:24:45.39:165,45,0	1/1:26,1:26:36.29:307,36,0	1/1:5,12:18:30.10:476,30,0	0/0:40,0:40:99:0,99,1097	0/0:24,0:25:65.88:0,66,695	1/1:4,0:18:32.42:113,32,0	1/1:6,0:21:37.27:130,37,0	1/1:6,0:21:34.81:120,35,0	1/1:5,0:24:9.04:101,9,0	1/1:3,0:25:47.41:163,47,0	0/0:33,0:33:84.15:0,84,908	1/1:1,0:14:26.11:97,26,0	1/1:7,7:15:26.34:330,26,0	1/1:2,11:14:24.04:353,24,0	1/1:10,21:31:33.02:524,33,0	0/1:2,0:12:29.81:49,0,30	1/1:3,0:15:24.95:86,25,0	1/1:3,0:27:44.92:155,45,0	1/1:4,0:29:49.04:180,49,0	0/0:19,0:19:39.05:0,39,426	0/0:19,0:18:45.09:0,45,490	0/0:12,0:12:36.07:0,36,389
chr10	17500204	.	CTTT	C	2596.39	PASS	AB=0.589;AC=19;AF=0.339;AN=56;BaseQRankSum=-0.090;DP=577;FS=7.757;HRun=17;HaplotypeScore=100.3718;InbreedingCoeff=0.7556;MQ=77.59;MQ0=3;MQRankSum=-1.958;QD=13.11;ReadPosRankSum=1.246;VQSLOD=1.2999;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:11,1:44:13.56:0,14,106	1/1:1,2:4:8.93:79,9,0	0/0:43,0:21:7.03:0,7,174	0/0:27,0:18:20.19:0,20,264	1/1:6,17:24:47.65:467,48,0	0/0:16,0:21:57.14:0,57,830	0/0:13,0:18:45.04:0,45,578	0/0:25,0:25:45.55:0,46,657	0/0:2,0:8:8.86:0,9,35	1/1:4,14:18:38.91:400,39,0	1/1:4,13:18:25.20:274,25,0	0/1:3,2:19:8.29:43,0,8	0/1:4,1:10:29.95:30,0,36	0/0:3,0:13:11.12:0,11,57	0/0:14,0:18:39.05:0,39,512	0/0:20,0:25:66.05:0,66,923	1/1:3,17:21:40.61:429,41,0	0/0:14,0:17:45.07:0,45,640	0/0:19,0:19:36.07:0,36,507	0/0:20,0:24:51.04:0,51,671	0/0:15,0:16:37.60:0,38,514	0/0:7,0:18:15.09:0,15,49	0/0:7,0:18:14.22:0,14,76	0/1:6,2:18:2.48:48,0,2	0/0:22,0:24:60.16:0,60,958	1/1:11,19:30:51.60:525,52,0	1/1:5,17:24:33.96:352,34,0	1/1:7,5:12:14.76:154,15,0
chr10	17500471	.	TA	T	3204.11	PASS	AB=0.955;AC=15;AF=0.268;AN=56;BaseQRankSum=11.879;DP=634;FS=3.659;HRun=10;HaplotypeScore=66.5137;InbreedingCoeff=0.9050;MQ=71.33;MQ0=0;MQRankSum=0.097;QD=16.95;ReadPosRankSum=3.314;VQSLOD=4.3897;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,37:40:99:885,102,0	0/0:8,0:8:24.06:0,24,265	0/1:20,1:19:15:15,0,228	0/0:11,0:10:17.64:0,18,138	0/0:25,0:25:66.14:0,66,703	0/0:30,0:30:84.22:0,84,920	0/0:18,0:18:48.08:0,48,503	0/0:24,0:24:57.12:0,57,605	0/0:27,0:27:56.12:0,56,753	0/0:35,0:35:87.13:0,87,943	0/0:17,1:18:13.08:0,13,371	1/1:3,21:24:56.99:495,57,0	1/1:1,17:18:44.98:390,45,0	1/1:3,19:22:22.75:365,23,0	0/0:33,0:33:87.19:0,87,935	0/0:32,1:33:61.18:0,61,894	0/0:24,0:25:63.12:0,63,666	0/0:14,0:14:36.06:0,36,384	0/0:23,1:25:36.89:0,37,576	0/0:25,0:25:57.14:0,57,620	0/0:12,0:12:30.07:0,30,322	1/1:1,19:20:47.78:393,48,0	1/1:1,18:19:44.81:390,45,0	1/1:2,23:25:36.48:471,36,0	0/0:15,0:16:47.92:0,48,485	0/0:20,0:21:50.92:0,51,518	0/0:34,0:34:96.15:0,96,1007	0/0:11,0:11:30.06:0,30,320
chr10	17503099	.	ACTGT	A	2738.71	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=8.871;DP=384;FS=1.901;HRun=0;HaplotypeScore=67.2731;InbreedingCoeff=0.8103;MQ=84.23;MQ0=0;MQRankSum=-4.897;QD=32.22;ReadPosRankSum=-2.428;VQSLOD=3.1725;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:93.29:0,93,2379	0/0:2,0:2:6.02:0,6,117	0/1:18,0:18:6.60:7,0,918	0/0:10,0:10:24.03:0,24,508	0/0:4,0:4:12.04:0,12,327	0/0:8,0:8:24.07:0,24,598	0/0:42,0:42:99:0,123,3258	1/1:0,17:17:45.14:825,45,0	0/0:9,0:9:27.09:0,27,732	0/0:11,0:11:33.11:0,33,900	0/0:3,0:3:9.03:0,9,234	0/0:15,0:15:42.14:0,42,1109	0/0:8,0:8:24.08:0,24,654	0/0:10,0:10:30.09:0,30,758	0/0:3,0:3:9.03:0,9,245	0/0:11,0:11:30.09:0,30,761	0/0:29,0:29:84.27:0,84,2175	0/0:19,0:19:54.13:0,54,1330	1/1:0,11:11:33.10:593,33,0	1/1:0,5:5:9.03:174,9,0	1/1:3,31:34:69.19:1298,69,0	0/0:9,0:9:27.09:0,27,726	0/0:7,0:7:18.06:0,18,471	0/0:26,0:26:78.25:0,78,2021	0/0:12,0:12:36.12:0,36,951	0/0:10,0:10:30.10:0,30,804	0/0:14,0:14:42.14:0,42,1121	0/0:6,0:6:18.06:0,18,491
chr10	17503607	.	T	TGG	5384.42	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-10.431;DP=560;FS=11.248;HRun=5;HaplotypeScore=65.4197;InbreedingCoeff=0.9926;MQ=74.97;MQ0=0;MQRankSum=-2.565;QD=40.18;ReadPosRankSum=2.857;VQSLOD=3.3984;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,108,1314	1/1:0,5:6:15.05:260,15,0	0/0:25,0:25:56.31:0,56,799	0/0:15,0:13:35.90:0,36,403	1/1:2,9:11:27.05:440,27,0	0/0:22,0:22:54.11:0,54,632	0/0:18,0:18:45.04:0,45,488	0/0:24,0:24:54.11:0,54,637	0/0:21,0:21:63.15:0,63,755	1/1:1,19:20:57.14:894,57,0	1/1:1,9:10:18.06:314,18,0	0/0:29,0:29:87:0,87,966	0/0:21,0:21:54.16:0,54,668	0/0:16,0:16:45.13:0,45,558	0/0:27,0:27:75.17:0,75,907	0/0:23,0:23:69.19:0,69,850	1/1:2,26:28:57.20:996,57,0	0/0:24,0:24:63.16:0,63,771	0/0:18,0:18:48.10:0,48,568	0/0:18,0:18:42.10:0,42,506	0/0:18,0:18:33.14:0,33,564	0/0:26,0:26:75.02:0,75,875	0/0:10,0:10:29.83:0,30,355	0/0:26,0:26:69.19:0,69,849	0/0:8,0:8:24.08:0,24,305	1/1:3,23:26:69.24:1186,69,0	1/1:6,18:24:51.04:1032,51,0	1/1:0,9:9:15.05:262,15,0
chr10	17504198	.	ATAG	A	12884.50	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=8.491;DP=697;FS=1.290;HRun=0;HaplotypeScore=113.7418;InbreedingCoeff=0.9996;MQ=88.69;MQ0=0;MQRankSum=-4.353;QD=40.01;ReadPosRankSum=5.035;VQSLOD=5.9319;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,35:38:84.29:1394,84,0	0/0:10,0:10:24.01:0,24,452	0/0:32,0:32:69.42:0,69,1669	0/0:23,0:23:63.05:0,63,1244	0/0:28,0:28:78.25:0,78,1700	1/1:1,24:25:66.23:1090,66,0	1/1:1,17:18:39.13:647,39,0	0/0:28,0:28:78.24:0,78,1607	0/0:23,0:23:69.24:0,69,1517	0/0:27,0:27:78.27:0,78,1768	0/0:21,0:21:63.22:0,63,1423	1/1:0,22:22:60.21:993,60,0	1/1:3,24:27:60.10:998,60,0	1/1:0,16:16:42.14:695,42,0	1/1:1,39:40:99:1696,102,0	1/1:1,26:27:69.24:1133,69,0	0/0:28,0:28:78.27:0,78,1729	1/1:3,20:23:46.72:888,47,0	0/0:21,0:21:60.18:0,60,1242	0/0:19,0:19:54.16:0,54,1117	0/0:47,0:47:99:0,135,2898	1/1:2,25:27:63.21:1030,63,0	1/1:1,15:16:42.14:692,42,0	1/1:0,27:26:72.25:1183,72,0	1/1:3,12:15:27.09:445,27,0	0/0:27,0:26:81.28:0,81,1812	0/0:25,0:25:66.21:0,66,1438	0/0:16,0:16:48.16:0,48,1070
chr10	17504287	.	GGGGTGTGTGTGTGT	G	7492.93	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=9.685;DP=593;FS=12.196;HRun=0;HaplotypeScore=244.9373;InbreedingCoeff=0.9870;MQ=61.87;MQ0=8;MQRankSum=-3.468;QD=46.54;ReadPosRankSum=2.076;VQSLOD=2.9498;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:75.03:0,75,2168	1/1:0,5:6:9.03:365,9,0	0/0:33,0:18:44.08:0,44,451	0/0:38,0:22:38.29:0,38,592	1/1:1,31:33:35.86:1256,36,0	0/0:21,0:22:54:0,54,2155	0/0:15,0:15:38.95:0,39,1017	0/0:29,0:29:84.11:0,84,1824	0/0:15,0:15:45.10:0,45,1542	1/1:0,24:26:69.55:1169,70,0	1/1:0,22:23:33:1101,33,0	0/0:21,0:21:51.08:0,51,1707	0/0:12,0:12:33:0,33,1255	0/0:17,0:17:34.31:0,34,1218	0/0:15,0:15:41.99:0,42,867	0/0:16,0:16:41.92:0,42,1862	1/1:15,7:24:56.91:1240,57,0	0/0:19,0:20:54.05:0,54,2185	0/0:10,0:9:26.89:0,27,463	0/0:19,0:19:53.82:0,54,1428	0/0:24,0:23:44.91:0,45,1124	0/0:33,0:34:60.83:0,61,2147	0/0:14,0:16:42.03:0,42,1671	0/0:28,0:28:66.96:0,67,2402	0/0:12,0:13:15.96:0,16,1097	1/1:2,21:23:60.45:1273,60,0	1/1:0,13:14:21.54:809,22,0	1/1:11,0:11:32.66:280,33,0
chr10	17505128	.	GGTGAATCTCTGTGA	G	6604.36	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=12.009;DP=668;FS=17.857;HRun=0;HaplotypeScore=256.5393;InbreedingCoeff=0.9907;MQ=62.92;MQ0=0;MQRankSum=-7.624;QD=82.55;ReadPosRankSum=-2.046;VQSLOD=2.9302;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,120,7648	0/0:8,0:8:24.07:0,24,1503	0/0:16,0:15:42.09:0,42,1661	0/0:21,0:19:51.04:0,51,2205	0/0:38,0:38:99:0,108,7379	0/0:25,0:25:75.24:0,75,4706	0/0:22,0:22:63.19:0,63,3793	1/1:4,19:23:57.16:1742,57,0	0/0:20,0:20:60.19:0,60,3965	0/0:24,0:24:66.23:0,66,4248	0/0:25,0:25:69.24:0,69,4030	0/0:21,0:21:63.22:0,63,3942	0/0:18,0:18:54.19:0,54,3473	0/0:19,0:19:48.15:0,48,3190	0/0:25,0:25:75.24:0,75,4815	0/0:39,0:39:99:0,117,7795	0/0:22,0:22:66.21:0,66,4476	0/0:33,0:33:96.33:0,96,6266	1/1:4,11:15:33.07:1079,33,0	1/1:8,30:38:84.20:3366,84,0	1/1:1,3:4:12.04:417,12,0	0/0:28,0:28:81.27:0,81,5193	0/0:24,0:24:72.25:0,72,4543	0/0:18,0:18:51.16:0,51,3139	0/0:20,0:20:60.17:0,60,3674	0/0:24,0:24:60.20:0,60,3959	0/0:40,0:40:99:0,111,7295	0/0:16,0:16:48.16:0,48,2271
chr10	17507988	.	CTCTCTCTCTCTCTCTCTCTCTCTT	C	4341.60	PASS	AB=0.982;AC=17;AF=0.304;AN=56;BaseQRankSum=7.609;DP=494;FS=3.929;HRun=0;HaplotypeScore=237.5457;InbreedingCoeff=0.0562;MQ=51.38;MQ0=15;MQRankSum=-5.193;QD=18.55;ReadPosRankSum=4.995;VQSLOD=2.8019;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:21:2.54:3,0,125	1/1:10,0:10:6:154,6,0	0/1:16,0:7:0:0,0,0	0/0:19,0:6:6.49:0,6,75	0/1:12,3:15:6.63:551,0,7	0/0:19,0:19:4.88:0,5,1116	0/0:23,0:23:9.03:0,9,281	0/0:30,0:27:27.06:0,27,626	0/1:16,0:16:3.38:313,0,3	1/1:11,0:10:12.04:521,12,0	0/1:14,0:13:9.92:486,0,10	0/0:10,0:10:0.58:0,1,155	0/1:16,0:16:51.55:52,0,100	0/0:9,0:9:8.99:0,9,160	0/0:16,0:15:24.08:0,24,1221	0/0:27,0:27:57.07:0,57,3021	1/1:22,0:21:6.02:261,6,0	0/0:13,0:13:8.56:0,9,1049	0/1:14,0:14:8.86:9,0,605	0/0:10,0:10:11.89:0,12,232	0/0:15,0:15:12.50:0,12,289	0/1:17,0:17:67.61:68,0,103	0/0:21,0:20:3.48:0,3,71	0/0:26,0:26:20.74:0,21,675	0/0:22,0:22:3.01:0,3,145	0/1:26,1:27:99:854,0,284	0/1:21,0:21:58.13:925,0,58	0/1:13,0:10:29.88:145,0,30
chr10	17507990	.	CTCTCTCTCTCTCTCTCTCTCTT	C	5832.87	PASS	AB=0.908;AC=22;AF=0.393;AN=56;BaseQRankSum=6.152;DP=506;FS=11.493;HRun=0;HaplotypeScore=223.9945;InbreedingCoeff=0.2289;MQ=51.31;MQ0=16;MQRankSum=-4.643;QD=24.10;ReadPosRankSum=5.375;VQSLOD=2.3054;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:21:31.31:31,0,59	0/1:5,6:11:38.74:237,0,39	0/0:17,0:8:2.19:0,2,10	0/0:20,0:5:0:0,0,0	1/1:15,1:16:18.04:594,18,0	0/0:18,0:18:5.24:0,5,940	0/0:24,0:24:11.69:0,12,198	0/0:28,0:25:24.07:0,24,395	1/1:17,0:17:13.90:441,14,0	1/1:7,4:10:12.04:704,12,0	1/1:3,11:13:12.04:683,12,0	0/1:11,0:11:28.25:28,0,71	0/1:16,0:16:31.89:106,0,32	0/0:15,0:15:21:0,21,352	0/0:16,0:15:24.08:0,24,1005	0/0:27,0:27:57.09:0,57,2513	1/1:8,14:21:6.02:352,6,0	0/0:13,0:13:7.45:0,7,861	0/1:14,0:14:9.88:10,0,402	0/1:10,0:10:2.20:2,0,133	0/0:17,0:17:15.52:0,16,275	0/1:17,0:17:89.61:171,0,90	0/0:20,0:19:3:0,3,28	0/0:26,0:26:22.79:0,23,561	0/0:23,0:23:3.01:0,3,119	0/1:10,16:26:51.21:1107,0,51	1/1:8,13:21:2.36:1190,2,0	1/1:11,3:10:3.01:176,3,0
chr10	17507992	.	CTCTCTCTCTCTCTCTCTCTT	C	5498.27	PASS	AB=0.952;AC=23;AF=0.411;AN=56;BaseQRankSum=5.081;DP=503;FS=7.277;HRun=0;HaplotypeScore=209.6993;InbreedingCoeff=0.1731;MQ=50.95;MQ0=16;MQRankSum=-2.981;QD=20.83;ReadPosRankSum=3.514;VQSLOD=3.0329;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:21,0:20:16.95:57,0,17	0/1:11,0:11:9.11:170,0,9	0/0:14,0:5:3.07:0,3,11	0/1:21,0:5:0.17:0,0,0	1/1:17,0:17:21.52:535,22,0	0/0:18,0:18:1.77:0,2,744	0/0:24,0:24:5.69:0,6,104	0/0:28,0:25:9.03:0,9,134	0/1:4,13:17:3.49:599,0,3	1/1:11,0:10:12.04:570,12,0	1/1:14,0:13:12.04:550,12,0	0/1:10,0:10:29.38:57,0,29	1/1:17,0:17:5.56:166,6,0	0/0:15,0:15:20.73:0,21,159	0/0:17,0:16:2.13:0,2,778	0/0:26,0:26:57.06:0,57,2010	1/1:23,0:22:8.96:303,9,0	0/0:12,0:12:7.03:0,7,674	0/1:14,0:14:31.14:31,0,205	0/1:13,0:13:71.81:72,0,74	0/0:17,0:17:9.44:0,9,109	0/1:16,0:16:34.31:297,0,34	0/0:20,0:19:1.25:0,1,3	0/0:26,0:26:0.52:0,1,352	0/0:22,0:22:3.01:0,3,93	0/1:25,0:25:27.36:927,0,27	1/1:20,0:20:23.81:1021,24,0	1/1:14,0:10:3.01:143,3,0
chr10	17507996	.	CTCTCTCTCTCTCTCTT	C	6022.17	PASS	AB=1.000;AC=40;AF=0.714;AN=56;BaseQRankSum=0.641;DP=509;FS=9.721;HRun=0;HaplotypeScore=184.9766;InbreedingCoeff=0.5118;MQ=51.72;MQ0=16;MQRankSum=-1.183;QD=16.15;ReadPosRankSum=-0.216;VQSLOD=3.0263;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:9,12:20:3.01:134,3,0	1/1:10,0:10:8.35:143,8,0	0/0:15,0:5:6.39:0,6,42	0/0:22,0:6:2.76:0,3,17	1/1:18,0:18:24.03:424,24,0	0/0:15,0:15:1.36:0,1,427	0/0:25,0:25:5.61:0,6,50	1/1:31,0:28:17.89:138,18,0	1/1:17,0:17:8.02:420,8,0	1/1:15,0:14:26.94:570,27,0	1/1:14,0:13:12.04:438,12,0	1/1:3,8:11:3.01:134,3,0	1/1:4,14:18:5.85:250,6,0	1/1:15,0:15:23.76:194,24,0	0/1:18,0:17:0.19:0,0,360	0/0:26,0:26:47.70:0,48,1047	1/1:21,0:20:8.96:247,9,0	0/0:12,0:12:0.11:0,0,313	1/1:7,7:14:9.05:208,9,0	1/1:14,0:14:14.99:148,15,0	1/1:17,0:17:11.89:98,12,0	1/1:14,3:17:21.03:593,21,0	1/1:20,0:19:3.17:20,3,0	0/1:25,0:25:30.07:156,0,30	0/0:21,0:21:3.01:0,3,41	1/1:24,0:24:20.46:790,20,0	1/1:20,0:20:20.91:802,21,0	1/1:13,0:9:3.01:115,3,0
chr10	17508000	.	CTCTCTCTCTCTT	C	5800.98	PASS	AB=1.000;AC=47;AF=0.839;AN=56;BaseQRankSum=0.080;DP=500;FS=5.273;HRun=0;HaplotypeScore=158.9592;InbreedingCoeff=0.0660;MQ=50.86;MQ0=17;MQRankSum=-2.609;QD=11.94;ReadPosRankSum=-0.170;VQSLOD=3.3176;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:19:3.01:88,3,0	0/1:8,0:8:7.49:98,0,7	0/0:14,0:3:5.97:0,6,40	0/1:22,0:7:0.48:0,0,12	1/1:19,0:19:26.97:342,27,0	0/1:17,0:17:65.27:65,0,110	0/1:27,0:27:4.78:6,0,5	1/1:26,0:23:26.89:217,27,0	1/1:16,0:16:8.49:309,8,0	1/1:18,0:17:35.95:543,36,0	1/1:14,0:13:12.04:326,12,0	1/1:11,0:11:3.01:88,3,0	1/1:17,0:18:5.77:175,6,0	1/1:15,0:15:23.95:195,24,0	0/1:19,0:18:70.74:205,0,71	0/1:26,0:26:99:160,0,224	1/1:20,0:20:8.96:191,9,0	0/1:12,0:12:92.25:138,0,92	1/1:11,0:11:26.33:202,26,0	1/1:14,0:14:14.98:123,15,0	1/1:15,0:15:11.83:98,12,0	1/1:17,0:17:24.03:450,24,0	1/1:3,17:19:3.10:32,3,0	1/1:23,1:24:27.39:358,27,0	1/1:21,0:21:2.68:11,3,0	1/1:24,0:24:50.08:687,50,0	1/1:20,0:20:21.07:606,21,0	1/1:12,0:8:3.01:87,3,0
chr10	17508002	.	CTCTCTCTCTT	C	6065.58	PASS	AB=0.983;AC=51;AF=0.911;AN=56;BaseQRankSum=-1.368;DP=502;FS=2.494;HRun=0;HaplotypeScore=149.4137;InbreedingCoeff=-0.0721;MQ=53.09;MQ0=17;MQRankSum=-1.637;QD=12.08;ReadPosRankSum=1.490;VQSLOD=3.9809;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:19:3.01:74,3,0	0/1:8,0:8:9.84:84,0,10	0/1:17,0:5:15.12:15,0,42	0/1:24,0:9:5.77:6,0,23	1/1:18,0:18:26.93:299,27,0	1/1:18,0:18:11.45:164,11,0	0/1:26,0:26:4.27:32,0,4	1/1:26,0:23:26.89:217,27,0	1/1:16,0:16:8.91:254,9,0	1/1:18,0:17:38.96:517,39,0	1/1:14,0:13:12.04:270,12,0	1/1:11,0:11:3.01:74,3,0	1/1:18,0:18:5.77:147,6,0	1/1:16,0:16:26.95:219,27,0	1/1:18,2:19:12.33:327,12,0	1/1:24,3:27:36.50:609,37,0	1/1:19,0:19:8.96:163,9,0	0/1:10,1:11:33.08:210,0,33	1/1:11,0:11:26.94:191,27,0	1/1:15,0:15:17.20:130,17,0	1/1:15,0:15:11.64:98,12,0	1/1:16,0:16:24.03:394,24,0	1/1:20,0:19:2.73:20,3,0	1/1:23,0:23:26.91:311,27,0	1/1:20,0:20:3.01:37,3,0	1/1:24,0:24:50.66:623,51,0	1/1:19,0:19:21.06:509,21,0	1/1:12,0:8:3.01:73,3,0
chr10	17508004	.	CTCTCTCTT	C	6023.60	PASS	AB=0.890;AC=51;AF=0.911;AN=56;BaseQRankSum=-2.353;DP=494;FS=0.000;HRun=0;HaplotypeScore=139.1254;InbreedingCoeff=0.0277;MQ=54.41;MQ0=16;MQRankSum=-1.548;QD=12.19;ReadPosRankSum=3.184;VQSLOD=3.1303;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:19:3.01:60,3,0	0/1:8,0:8:9.97:70,0,10	0/1:18,0:6:12.12:12,0,64	0/1:25,0:10:0.28:0,0,43	1/1:17,0:17:26.87:262,27,0	1/1:19,0:19:33.85:289,34,0	0/1:3,22:25:3.94:76,0,4	1/1:25,0:22:29.90:245,30,0	1/1:16,0:16:8.48:198,8,0	1/1:18,0:17:41.96:489,42,0	1/1:13,0:12:12.04:215,12,0	1/1:11,0:11:3.01:60,3,0	1/1:18,0:18:5.77:119,6,0	1/1:15,0:15:29.94:244,30,0	1/1:18,0:17:32.95:330,33,0	1/1:27,1:28:65.96:782,66,0	1/1:18,0:18:8.96:135,9,0	0/1:10,1:11:5.47:236,0,5	1/1:11,0:11:26.91:185,27,0	1/1:17,0:17:18.44:148,18,0	1/1:16,0:16:14.74:123,15,0	1/1:16,0:16:24.03:338,24,0	1/1:19,0:18:2.62:18,3,0	1/1:20,0:20:26.75:283,27,0	1/1:0,20:20:3.01:81,3,0	1/1:23,0:23:50.73:556,51,0	1/1:18,0:18:21.05:411,21,0	1/1:11,0:8:3.01:59,3,0
chr10	17508720	.	GCTTCTTTTTTTTT	G	2694.17	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=6.516;DP=416;FS=9.972;HRun=0;HaplotypeScore=158.0155;InbreedingCoeff=0.9100;MQ=65.19;MQ0=1;MQRankSum=-1.363;QD=47.27;ReadPosRankSum=1.076;VQSLOD=2.6396;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:65.80:0,66,1531	0/0:3,0:3:9.02:0,9,172	0/0:14,0:8:17.19:0,17,422	0/0:13,0:9:20.89:0,21,401	0/0:23,0:23:63.17:0,63,2156	0/0:8,0:8:12.01:0,12,287	0/0:14,0:13:26.43:0,26,569	1/1:3,14:17:51.10:1120,51,0	0/0:19,0:19:57.17:0,57,2611	0/0:22,0:22:66.20:0,66,2740	0/0:16,0:16:33.09:0,33,1477	0/0:13,0:13:33.07:0,33,1022	0/0:7,0:7:18.03:0,18,482	0/0:13,0:13:36.07:0,36,1042	0/0:11,0:11:30.03:0,30,770	0/0:10,0:10:27.01:0,27,367	0/0:31,0:30:75.07:0,75,2746	0/0:5,0:5:15.05:0,15,328	1/1:2,15:17:47.92:1035,48,0	1/1:1,12:13:24:645,24,0	1/1:2,8:10:3.01:45,3,0	0/0:9,0:9:24:0,24,752	0/0:14,0:13:38.46:0,38,757	0/0:13,0:13:23.98:0,24,612	0/0:19,0:19:18:0,18,291	0/0:28,0:28:79.13:0,79,3779	0/0:15,0:15:32.78:0,33,1369	0/0:14,0:14:26.95:0,27,673
chr10	17508731	.	T	TGG	254.66	PASS	AB=0.925;AC=4;AF=0.071;AN=56;BaseQRankSum=3.288;DP=458;FS=0.975;HRun=0;HaplotypeScore=97.9086;InbreedingCoeff=0.2294;MQ=53.76;MQ0=21;MQRankSum=-0.048;QD=5.92;ReadPosRankSum=1.623;VQSLOD=2.9327;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:30:70.92:0,71,835	0/0:5,0:4:12.04:0,12,182	0/0:11,0:4:11.99:0,12,161	0/0:10,0:6:17.97:0,18,238	0/0:24,0:24:69.16:0,69,1027	0/0:14,0:13:6.01:0,6,64	0/0:16,0:14:30.46:0,30,342	0/1:14,3:17:30.81:239,0,31	0/0:19,0:19:57.18:0,57,898	0/0:24,0:24:69.21:0,69,1053	0/0:14,0:14:38.16:0,38,563	0/0:17,0:17:45.12:0,45,571	0/0:11,0:11:33.10:0,33,426	0/0:17,0:17:51.08:0,51,673	0/0:13,0:11:33.08:0,33,392	0/0:14,0:14:36.02:0,36,434	0/0:28,0:26:66.18:0,66,1018	0/0:12,0:6:18.01:0,18,213	0/1:16,0:16:61.07:68,0,61	0/0:13,0:13:0.81:0,1,60	1/1:9,1:9:3.01:50,3,0	0/0:11,0:11:33.10:0,33,453	0/0:17,0:15:43.88:0,44,507	0/0:18,0:16:28.48:0,28,337	0/0:17,0:17:11.78:0,12,95	0/0:29,0:28:81.22:0,81,1271	0/0:21,0:19:42.01:0,42,635	0/0:9,0:9:15.05:0,15,228
chr10	17508734	.	C	CT	2668.32	PASS	AB=1.000;AC=32;AF=0.571;AN=56;BaseQRankSum=-6.832;DP=492;FS=0.000;HRun=11;HaplotypeScore=91.7307;InbreedingCoeff=0.5417;MQ=49.16;MQ0=25;MQRankSum=0.953;QD=7.92;ReadPosRankSum=-0.649;VQSLOD=2.4053;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:32,0:30:11.80:12,0,52	0/0:6,0:5:2.63:0,3,23	0/0:9,0:2:2.98:0,3,23	0/0:10,0:6:2:0,2,6	1/1:11,14:26:39.27:380,39,0	1/1:13,0:12:3.22:13,3,0	1/1:17,0:14:18.91:99,19,0	0/0:29,0:27:32.99:0,33,173	0/0:18,0:18:35.82:0,36,276	1/1:7,17:26:62.09:590,62,0	1/1:4,11:15:32.48:292,32,0	0/1:16,0:16:12.60:13,0,25	0/0:12,0:12:7.40:0,7,24	0/0:17,0:17:7.98:0,8,38	1/1:13,0:11:8.54:37,9,0	1/1:13,0:13:0.56:2,1,0	1/1:12,18:28:42.07:419,42,0	1/1:13,0:5:3.93:12,4,0	0/0:22,0:21:22.44:0,22,99	0/0:21,0:21:9.40:0,9,32	0/1:10,0:9:0:0,0,0	0/0:11,0:11:5.27:0,5,27	1/1:18,0:16:4.32:15,4,0	0/1:18,0:16:6.64:12,0,7	1/1:17,0:17:3.73:16,4,0	1/1:8,20:29:22.48:565,22,0	1/1:8,13:19:19.49:231,19,0	1/1:0,9:9:15.01:142,15,0
chr10	17508917	.	TTGTGTGTG	T	2778.13	PASS	AB=0.785;AC=34;AF=0.654;AN=52;BaseQRankSum=3.051;DP=726;FS=9.213;HRun=0;HaplotypeScore=175.0080;InbreedingCoeff=-0.1801;MQ=52.84;MQ0=21;MQRankSum=-3.401;QD=4.68;ReadPosRankSum=-0.059;VQSLOD=1.9783;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:32:5.97:44,6,0	1/1:6,0:6:4.79:26,5,0	./.	./.	1/1:18,11:28:14.62:158,15,0	1/1:11,6:16:3.01:75,3,0	0/1:25,2:26:0.65:229,0,1	0/0:24,0:26:20.48:0,20,127	0/1:16,0:34:8.09:312,0,8	0/1:22,1:22:26.90:131,0,27	1/1:11,3:13:1.24:2,1,0	0/1:15,0:28:41.77:52,0,42	1/1:16,0:25:4.88:249,5,0	0/1:11,0:23:11.17:155,0,11	0/1:28,13:41:33.76:80,0,34	0/1:18,12:29:7.64:13,0,8	0/1:15,14:28:4.49:69,0,4	1/1:13,7:20:5.85:112,6,0	0/1:19,0:16:11.27:24,0,11	0/1:12,0:20:2.03:2,0,52	0/1:44,0:43:90.95:91,0,187	0/1:16,0:25:16.57:50,0,17	1/1:9,0:16:9.03:145,9,0	0/0:28,0:30:9.32:0,9,93	1/1:11,11:20:11.13:297,11,0	1/1:25,3:26:8.94:245,9,0	0/1:17,12:28:24.89:258,0,25	0/1:6,0:7:46.95:107,0,47
chr10	17511031	.	GCTGTGTTTT	G	11395.58	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=16.169;DP=722;FS=3.109;HRun=0;HaplotypeScore=211.1081;InbreedingCoeff=0.9991;MQ=86.12;MQ0=0;MQRankSum=-17.032;QD=71.67;ReadPosRankSum=2.020;VQSLOD=4.6348;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,22:26:56.44:1660,56,0	0/0:11,0:11:33.11:0,33,1606	0/0:28,0:28:74.06:0,74,3367	0/0:26,0:26:72.25:0,72,3039	0/0:35,0:35:99:0,102,4892	0/0:28,0:28:78.25:0,78,3486	0/0:35,0:35:99:0,99,4174	0/0:35,0:35:99:0,102,4523	0/0:20,0:20:60.18:0,60,2678	0/0:26,0:26:75.26:0,75,3540	0/0:22,0:22:63.22:0,63,2904	1/1:3,23:26:66.23:1955,66,0	1/1:2,17:19:48.16:1470,48,0	1/1:2,16:18:42.14:1286,42,0	0/0:29,0:29:78.27:0,78,3591	0/0:33,0:33:96.33:0,96,4668	0/0:34,0:34:99:0,102,4896	0/0:19,0:19:57.17:0,57,2603	0/0:25,0:25:72.24:0,72,3386	0/0:36,0:36:99:0,102,4949	0/0:27,0:27:72.23:0,72,3273	1/1:5,28:33:81.28:2433,81,0	1/1:0,22:22:66.18:1949,66,0	1/1:4,11:15:20.64:642,21,0	0/0:16,0:16:45.15:0,45,2180	0/0:18,0:18:54.19:0,54,2413	0/0:43,0:43:99:0,129,6136	0/0:17,0:17:45.15:0,45,1867
chr10	17512379	.	TGAG	T	6838.60	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=13.230;DP=601;FS=10.404;HRun=0;HaplotypeScore=89.2488;InbreedingCoeff=0.9995;MQ=75.89;MQ0=0;MQRankSum=-3.933;QD=45.29;ReadPosRankSum=3.063;VQSLOD=6.6720;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,126,2953	1/1:0,10:10:27.09:476,27,0	0/0:18,0:18:47.99:0,48,1053	0/0:21,0:21:54.18:0,54,1259	1/1:0,24:24:60.17:1026,60,0	0/0:17,0:17:48.16:0,48,1136	0/0:19,0:19:57.20:0,57,1348	0/0:31,0:31:93.32:0,93,2122	0/0:22,0:22:66.23:0,66,1560	1/1:0,20:20:60.16:1025,60,0	1/1:0,23:23:60.17:1026,60,0	0/0:27,0:27:78.27:0,78,1844	0/0:20,0:20:60.21:0,60,1414	0/0:23,0:23:69.22:0,69,1549	0/0:28,0:28:84.26:0,84,1877	0/0:24,0:24:72.23:0,72,1658	1/1:0,27:27:66.23:1164,66,0	0/0:21,0:21:63.22:0,63,1477	0/0:22,0:22:66.22:0,66,1518	0/0:20,0:20:60.21:0,60,1418	0/0:19,0:19:51.18:0,51,1206	0/0:24,0:24:72.23:0,72,1656	0/0:17,0:17:51.18:0,51,1206	0/0:22,0:22:60.21:0,60,1417	0/0:12,0:12:36.12:0,36,852	1/1:2,15:17:45.14:766,45,0	1/1:3,19:22:54.18:952,54,0	1/1:1,7:8:24.08:402,24,0
chr10	17513094	.	C	CT	4787.81	PASS	AB=0.615;AC=21;AF=0.375;AN=56;BaseQRankSum=-7.779;DP=533;FS=13.434;HRun=9;HaplotypeScore=100.6523;InbreedingCoeff=0.9405;MQ=79.09;MQ0=3;MQRankSum=2.407;QD=21.00;ReadPosRankSum=-0.935;VQSLOD=3.6535;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,32:40:81.18:882,81,0	0/0:12,0:12:26.97:0,27,231	0/0:28,0:19:42.53:0,43,300	0/0:31,0:22:11.73:0,12,110	0/0:21,0:21:41.96:0,42,366	0/0:15,0:15:35.98:0,36,312	0/0:13,0:13:14.95:0,15,265	1/1:11,21:33:39.93:640,40,0	0/0:16,0:16:23.97:0,24,208	0/0:17,0:17:38.99:0,39,340	0/0:18,0:18:50.98:0,51,445	1/1:3,9:12:27.07:298,27,0	1/1:4,10:14:41.63:392,42,0	1/1:1,9:10:24.06:264,24,0	0/0:18,0:18:41.94:0,42,357	0/0:20,0:21:52.97:0,53,441	0/0:21,0:21:47.90:0,48,416	0/0:18,0:18:47.96:0,48,411	1/1:6,17:23:28.11:536,28,0	1/1:3,11:14:12.94:334,13,0	1/1:2,16:19:16.04:394,16,0	1/1:8,15:23:31.02:327,31,0	0/1:6,10:16:1.52:208,0,2	1/1:3,20:24:28:512,28,0	0/0:13,0:13:29.97:0,30,256	0/0:15,0:18:37.05:0,37,299	0/0:14,0:14:32.96:0,33,280	0/0:9,0:9:17.98:0,18,156
chr10	17513117	.	TTGTGTGTG	T	2718.78	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=0.699;DP=550;FS=4.249;HRun=0;HaplotypeScore=177.5524;InbreedingCoeff=0.8109;MQ=57.33;MQ0=12;MQRankSum=-7.801;QD=27.74;ReadPosRankSum=2.707;VQSLOD=3.0369;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:38:45.13:0,45,1273	0/0:12,0:10:14.97:0,15,231	0/0:41,0:15:11.83:0,12,217	0/0:44,0:20:12.93:0,13,361	0/0:17,0:16:3.01:0,3,49	1/1:11,8:19:18.06:435,18,0	1/1:6,3:9:9.03:229,9,0	0/0:28,0:29:43.03:0,43,1191	0/0:9,0:18:2.86:0,3,44	0/0:10,0:10:12.04:0,12,329	0/0:15,0:15:6.02:0,6,139	0/0:9,0:12:18.04:0,18,537	0/0:13,0:16:24.08:0,24,567	0/0:12,0:14:8.88:0,9,219	1/1:9,13:22:30.10:741,30,0	1/1:6,12:21:36.12:876,36,0	0/0:27,0:27:30:0,30,665	1/1:11,2:13:3.01:76,3,0	0/0:18,0:18:30.10:0,30,970	0/0:16,0:17:39.12:0,39,1225	0/0:20,0:25:48.14:0,48,1281	0/0:15,0:19:27.09:0,27,785	0/0:7,0:12:9.03:0,9,259	0/0:24,0:27:36.58:0,37,910	1/1:1,12:14:21.07:534,21,0	0/0:21,0:21:39.11:0,39,960	0/0:12,0:12:15.04:0,15,299	0/0:8,0:8:12.04:0,12,232
chr10	17514717	.	C	CT	873.04	PASS	AB=0.839;AC=14;AF=0.259;AN=54;BaseQRankSum=-3.510;DP=482;FS=3.617;HRun=14;HaplotypeScore=56.2250;InbreedingCoeff=0.5902;MQ=65.72;MQ0=6;MQRankSum=0.685;QD=5.60;ReadPosRankSum=1.972;VQSLOD=2.1991;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,2:22:6.03:0,6,259	0/0:7,0:7:17.68:0,18,112	0/0:19,0:14:11.76:0,12,60	./.	0/1:27,2:30:1.80:2,0,283	1/1:6,12:19:7.54:173,8,0	1/1:3,8:11:12:105,12,0	0/0:43,0:40:65.97:0,66,437	0/0:10,0:11:26.55:0,27,170	0/0:19,0:19:26.40:0,26,170	0/0:14,0:14:19.51:0,20,133	0/0:9,0:9:14.63:0,15,95	0/1:14,0:14:1.48:1,0,105	0/0:14,0:15:19.59:0,20,120	1/1:2,11:14:23.84:199,24,0	1/1:4,10:15:11.16:126,11,0	0/0:24,1:25:52.96:0,53,343	1/1:3,10:14:11.84:94,12,0	0/0:13,0:13:26.39:0,26,166	0/0:24,0:24:49.09:0,49,307	0/1:4,1:5:14.50:15,0,46	0/0:7,0:7:0.25:0,0,14	0/0:9,0:9:14.69:0,15,95	0/0:9,0:9:11.39:0,11,76	0/1:10,23:34:3.54:323,0,4	0/0:23,0:26:24.36:0,24,143	0/0:32,1:34:46.30:0,46,412	0/0:11,1:13:6.40:0,6,145
chr10	17515292	.	T	TTG	2219.30	PASS	AB=0.920;AC=27;AF=0.519;AN=52;BaseQRankSum=-7.587;DP=702;FS=5.675;HRun=0;HaplotypeScore=151.5945;InbreedingCoeff=0.1717;MQ=68.77;MQ0=12;MQRankSum=5.590;QD=5.63;ReadPosRankSum=-0.438;VQSLOD=2.9858;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:45,2:47:79.60:211,0,80	1/1:10,0:10:3.99:60,4,0	./.	./.	0/1:16,3:19:15.34:139,0,15	0/1:20,0:20:0.22:0,0,52	0/0:34,0:34:25.10:0,25,119	1/1:26,0:26:1.25:3,1,0	0/0:36,0:36:36.89:0,37,180	1/1:15,2:17:6.42:146,6,0	0/1:14,2:15:18.86:98,0,19	0/1:12,3:16:45.11:74,0,45	0/1:23,2:25:24.42:133,0,24	1/1:21,0:21:16.87:174,17,0	0/0:32,0:31:16.42:0,16,77	0/0:40,0:40:36.93:0,37,181	1/1:20,5:23:9.48:304,9,0	0/0:21,0:17:8.02:0,8,38	1/1:14,0:13:0.47:1,0,0	0/0:21,0:21:13.97:0,14,65	0/0:42,0:41:2.80:0,3,13	1/1:9,10:20:6.02:89,6,0	1/1:7,9:16:15.05:208,15,0	0/1:28,2:30:13.10:195,0,13	0/0:11,0:11:6.11:0,6,27	0/1:30,0:30:31.85:112,0,32	0/1:26,2:29:40.97:325,0,41	1/1:10,2:11:9.48:114,9,0
chr10	17515326	.	GTGTGTGTA	G	5325.02	PASS	AB=0.998;AC=30;AF=0.536;AN=56;BaseQRankSum=-5.974;DP=703;FS=10.988;HRun=0;HaplotypeScore=177.8990;InbreedingCoeff=-0.3290;MQ=56.31;MQ0=18;MQRankSum=-3.671;QD=9.07;ReadPosRankSum=-4.414;VQSLOD=1.8704;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:42,0:42:41.55:42,0,2030	0/1:9,0:9:10.68:11,0,230	0/0:33,0:17:18.98:0,19,357	0/0:35,0:16:36.24:0,36,419	0/1:24,0:24:99:157,0,627	1/1:7,15:22:14.60:397,15,0	1/1:8,25:33:26.63:704,27,0	0/1:16,0:15:71.35:148,0,71	1/1:34,0:34:39.13:826,39,0	0/1:20,0:20:80.54:81,0,592	0/1:22,0:21:99:100,0,524	0/1:26,0:27:99:232,0,594	0/1:20,0:20:40.75:41,0,922	0/1:18,0:18:14.85:15,0,677	1/1:28,1:28:18.44:205,18,0	1/1:2,31:33:42.14:1122,42,0	0/1:26,0:25:81.94:82,0,1247	0/1:23,0:20:63.68:132,0,64	0/1:11,0:10:63.20:63,0,77	0/1:23,0:23:99:103,0,219	0/0:36,0:35:11.84:0,12,108	0/1:26,0:26:99:167,0,376	0/1:22,0:21:57.32:57,0,478	0/1:38,0:38:99:194,0,1055	1/1:2,13:15:12.04:260,12,0	0/1:25,0:24:99:136,0,817	0/1:29,0:29:51.59:52,0,1661	0/0:12,0:11:1.54:0,2,510
chr10	17515328	.	GTGTGTA	G	5107.24	PASS	AB=1.000;AC=37;AF=0.661;AN=56;BaseQRankSum=-6.076;DP=693;FS=18.662;HRun=0;HaplotypeScore=158.8639;InbreedingCoeff=-0.2395;MQ=57.49;MQ0=16;MQRankSum=-4.676;QD=8.18;ReadPosRankSum=-2.421;VQSLOD=2.3692;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:43,0:43:64.62:65,0,1349	0/1:10,0:10:54.85:55,0,108	0/0:35,0:19:25.56:0,26,420	0/0:34,0:16:35.88:0,36,397	0/1:23,0:24:99:162,0,390	1/1:22,0:22:15.04:251,15,0	1/1:31,0:31:26.54:420,27,0	1/1:16,0:15:13.25:207,13,0	1/1:34,0:34:39.13:644,39,0	0/1:18,0:18:82.68:83,0,364	0/1:20,0:19:99:121,0,301	0/1:26,0:26:99:232,0,368	0/1:21,0:21:92.24:92,0,553	0/1:18,0:18:39.83:40,0,447	1/1:7,20:27:21.07:433,21,0	1/1:32,0:32:42.06:671,42,0	0/1:26,0:25:81.84:82,0,864	1/1:23,0:20:32.88:305,33,0	1/1:11,0:10:18.86:144,19,0	1/1:22,1:23:0.32:265,0,0	1/1:34,0:33:2.74:12,3,0	0/1:26,0:26:99:167,0,232	0/1:22,0:21:60.83:61,0,290	0/1:36,0:36:99:194,0,686	1/1:15,0:15:11.97:160,12,0	0/1:25,0:24:99:166,0,438	0/1:29,0:29:57.71:58,0,1049	0/1:12,0:11:17.88:18,0,346
chr10	17515330	.	GTGTA	G	5369.09	PASS	AB=1.000;AC=37;AF=0.661;AN=56;BaseQRankSum=-6.099;DP=673;FS=18.445;HRun=0;HaplotypeScore=134.9002;InbreedingCoeff=-0.2155;MQ=58.50;MQ0=16;MQRankSum=-2.200;QD=8.92;ReadPosRankSum=-1.168;VQSLOD=2.2681;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:42,0:42:97.65:98,0,706	0/1:10,0:10:21.31:60,0,21	0/0:36,0:20:29.50:0,29,454	0/0:35,0:18:44.88:0,45,461	0/1:24,0:24:99:176,0,125	1/1:17,0:17:15.05:182,15,0	1/1:25,0:25:26.87:308,27,0	1/1:17,0:16:33.69:275,34,0	1/1:34,0:34:39.12:463,39,0	0/1:17,0:17:96.30:96,0,123	0/1:20,0:19:99:148,0,149	0/1:25,0:25:99:241,0,141	0/1:20,0:20:99:138,0,254	0/1:18,0:18:63.75:64,0,242	1/1:24,0:24:20.98:235,21,0	1/1:31,0:32:42.04:490,42,0	0/1:27,0:26:99:125,0,472	1/1:18,4:19:41.82:439,42,0	1/1:10,0:9:23.97:232,24,0	1/1:19,5:24:39.84:559,40,0	1/1:8,24:31:3.01:57,3,0	0/1:27,0:27:99:170,0,101	0/1:21,0:20:99:104,0,121	0/1:35,0:35:99:208,0,287	1/1:15,0:15:11.96:119,12,0	0/1:23,0:22:99:265,0,184	0/1:29,0:29:96.74:97,0,461	0/1:12,0:11:21.41:21,0,178
chr10	17515695	.	TA	T	2950.62	PASS	AB=0.871;AC=37;AF=0.661;AN=56;BaseQRankSum=10.110;DP=482;FS=2.473;HRun=13;HaplotypeScore=59.6003;InbreedingCoeff=0.8471;MQ=60.92;MQ0=14;MQRankSum=-0.100;QD=8.86;ReadPosRankSum=2.249;VQSLOD=2.8533;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,0:31:42.55:123,43,0	0/0:9,0:8:21.03:0,21,204	0/0:7,0:5:5.76:0,6,41	0/0:4,0:2:1.51:0,2,6	0/0:36,0:37:46.81:0,47,682	1/1:5,24:30:65.54:468,66,0	1/1:1,14:15:31.87:225,32,0	1/1:6,15:18:34.80:247,35,0	1/1:4,11:15:26.85:197,27,0	0/0:16,0:15:33.05:0,33,321	0/0:17,1:18:18.33:0,18,312	1/1:0,0:10:18.33:53,18,0	1/1:5,0:11:14.15:41,14,0	1/1:3,0:12:14.26:41,14,0	1/1:5,6:11:19.93:137,20,0	1/1:3,9:11:23.76:175,24,0	0/1:23,3:27:0.59:1,0,475	1/1:9,17:24:9.58:231,10,0	1/1:6,16:22:18.48:295,18,0	1/1:4,17:22:40.69:281,41,0	1/1:0,9:9:20.87:153,21,0	1/1:1,0:7:12.22:35,12,0	1/1:1,0:12:22.40:65,22,0	1/1:2,0:11:18.33:53,18,0	1/1:7,14:22:46.73:330,47,0	0/0:25,3:27:1.24:0,1,478	0/0:21,1:21:18.46:0,18,330	0/0:6,0:6:18.03:0,18,175
chr10	17516117	.	C	CT	6314.70	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-10.779;DP=746;FS=3.639;HRun=9;HaplotypeScore=76.6589;InbreedingCoeff=0.9908;MQ=76.57;MQ0=2;MQRankSum=0.526;QD=21.55;ReadPosRankSum=-0.033;VQSLOD=5.5177;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,29:35:57.15:628,57,0	0/0:11,0:11:29.99:0,30,260	0/0:31,0:26:42:0,42,337	0/0:27,0:24:29.70:0,30,330	0/0:29,2:31:38.47:0,38,586	0/0:26,0:26:62.94:0,63,542	0/0:33,0:33:63.23:0,63,605	1/1:11,14:25:16.04:395,16,0	0/0:26,0:27:65:0,65,553	0/0:36,0:36:89.94:0,90,777	0/0:22,0:23:55.98:0,56,469	1/1:3,33:37:93.08:1010,93,0	1/1:1,24:25:69.19:763,69,0	1/1:2,22:25:47.96:512,48,0	0/0:32,0:32:83.95:0,84,729	0/0:29,0:29:55.77:0,56,648	0/0:24,0:24:71.96:0,72,620	0/0:18,0:18:38.98:0,39,339	1/1:7,17:25:56.94:589,57,0	1/1:7,29:36:45.74:665,46,0	1/1:2,25:27:54.15:597,54,0	1/1:0,15:15:39.10:426,39,0	1/1:5,18:23:13.05:372,13,0	1/1:3,17:20:13:358,13,0	0/0:17,0:17:50.99:0,51,442	0/0:35,0:35:86.97:0,87,755	0/0:37,0:37:98.96:0,99,859	0/0:13,0:13:29.92:0,30,248
chr10	17517517	.	G	GT	5487.67	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-12.562;DP=734;FS=1.144;HRun=2;HaplotypeScore=67.8575;InbreedingCoeff=0.9983;MQ=84.02;MQ0=0;MQRankSum=-1.377;QD=37.59;ReadPosRankSum=2.531;VQSLOD=5.5694;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,147,1776	0/0:10,0:10:30.09:0,30,372	0/0:27,0:27:69.20:0,69,838	0/0:17,0:17:45.12:0,45,529	0/0:23,0:23:63.18:0,63,767	1/1:2,23:25:63.21:907,63,0	1/1:2,25:27:69.23:994,69,0	0/0:36,0:36:93.29:0,93,1153	0/0:23,0:23:63.20:0,63,781	0/0:29,0:29:84.26:0,84,1041	0/0:20,0:20:54.17:0,54,668	0/0:27,0:27:81.25:0,81,1003	0/0:24,0:24:66.21:0,66,817	0/0:22,0:22:60.19:0,60,743	1/1:0,36:36:99:1469,102,0	1/1:1,28:29:78.26:1123,78,0	0/0:31,0:31:90.27:0,90,1100	1/1:0,10:10:18.06:259,18,0	0/0:24,0:24:63.19:0,63,770	0/0:19,0:19:57.18:0,57,707	0/0:38,0:38:99:0,111,1361	0/0:20,0:20:60.19:0,60,742	0/0:35,0:35:99:0,105,1275	0/0:32,0:32:93.29:0,93,1152	1/1:0,19:19:51.17:735,51,0	0/0:26,0:26:78.24:0,78,957	0/0:39,0:39:99:0,108,1295	0/0:14,0:13:42.13:0,42,521
chr10	17517731	.	TGGG	T	1772.83	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=5.781;DP=370;FS=14.196;HRun=13;HaplotypeScore=80.6766;InbreedingCoeff=0.7940;MQ=72.67;MQ0=0;MQRankSum=2.139;QD=14.30;ReadPosRankSum=8.506;VQSLOD=-0.0152;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,8:14:11.31:118,11,0	1/1:4,0:5:2.20:11,2,0	0/0:18,0:16:14.25:0,14,254	0/0:13,0:11:7.78:0,8,109	0/0:9,0:11:8.91:0,9,102	0/0:10,0:12:12.02:0,12,167	0/0:17,0:20:19.22:0,19,184	0/0:17,0:17:12.87:0,13,132	0/0:9,0:9:8.97:0,9,72	0/0:5,0:5:5.97:0,6,48	1/1:5,0:7:0.41:1,0,0	1/1:2,12:17:38.88:418,39,0	1/1:5,13:18:33.08:401,33,0	1/1:5,7:12:11.87:127,12,0	0/0:17,0:18:12.01:0,12,130	0/0:18,0:22:25.24:0,25,212	0/0:8,0:8:6.88:0,7,54	0/0:7,0:8:7.24:0,7,84	0/0:7,0:9:14.97:0,15,137	0/0:13,0:13:12.47:0,12,105	0/0:15,0:16:18.01:0,18,205	1/1:4,10:16:28.41:325,28,0	1/1:8,10:20:20.62:236,21,0	1/1:5,10:15:26.56:327,27,0	0/0:10,0:10:17.92:0,18,143	0/0:13,0:14:4.56:0,5,31	0/0:16,0:19:22.15:0,22,162	0/0:3,0:3:5.99:0,6,48
chr10	17518092	.	A	ATT	5765.66	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-11.053;DP=509;FS=4.957;HRun=4;HaplotypeScore=58.1951;InbreedingCoeff=0.9962;MQ=79.98;MQ0=0;MQRankSum=-1.215;QD=47.26;ReadPosRankSum=1.372;VQSLOD=3.7265;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,27:27:78.27:1405,78,0	0/0:9,0:9:24.08:0,24,320	0/0:17,0:17:45.10:0,45,582	0/0:13,0:13:27.09:0,27,354	0/0:21,0:21:57.18:0,57,760	0/0:15,0:15:45.15:0,45,599	0/0:15,0:15:36.11:0,36,480	0/0:27,0:27:75.22:0,75,962	0/0:22,0:22:63.21:0,63,840	0/0:29,0:29:81.26:0,81,1067	0/0:16,0:16:48.16:0,48,640	1/1:1,14:15:36.12:648,36,0	1/1:2,19:21:54.19:972,54,0	1/1:1,18:19:48.16:865,48,0	0/0:27,0:27:78.25:0,78,1040	0/0:17,0:17:51.17:0,51,680	0/0:16,0:16:45.15:0,45,600	0/0:17,0:17:48.16:0,48,640	0/0:20,0:20:57.19:0,57,760	0/0:10,0:9:27.09:0,27,360	0/0:19,0:19:48.15:0,48,639	1/1:1,12:13:33.11:580,33,0	1/1:1,12:13:36.12:646,36,0	1/1:2,12:14:36.12:649,36,0	0/0:14,0:14:39.12:0,39,506	0/0:32,0:32:90.28:0,90,1186	0/0:26,0:26:72.22:0,72,944	0/0:5,0:5:15.05:0,15,199
chr10	17518424	.	GTT	G	3900.87	PASS	AB=0.538;AC=35;AF=0.700;AN=50;BaseQRankSum=0.216;DP=240;FS=9.315;HRun=13;HaplotypeScore=37.4693;InbreedingCoeff=0.7523;MQ=63.80;MQ0=4;MQRankSum=0.800;QD=20.32;ReadPosRankSum=3.226;VQSLOD=1.7838;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:13:36.04:0,36,474	1/1:0,4:5:11.76:99,12,0	0/0:16,0:8:5.13:0,5,128	0/0:7,0:6:14.83:0,15,142	1/1:2,7:10:11.94:166,12,0	1/1:3,13:17:35.76:332,36,0	1/1:0,2:2:3:29,3,0	1/1:7,20:27:29.95:470,30,0	1/1:0,0:3:8.23:36,8,0	1/1:0,11:11:30.05:291,30,0	1/1:2,9:10:24.01:233,24,0	0/0:3,0:3:9.03:0,9,130	0/0:5,0:5:15.04:0,15,188	0/0:2,0:3:8.52:0,9,95	1/1:0,6:6:15.02:145,15,0	1/1:0,2:2:3:29,3,0	1/1:3,17:20:48.06:465,48,0	1/1:2,9:11:17.98:175,18,0	1/1:8,12:20:26.36:330,26,0	1/1:0,3:4:11.76:99,12,0	./.	./.	0/0:1,0:1:3.01:0,3,43	./.	1/1:1,17:18:47.56:446,48,0	1/1:2,5:7:18:170,18,0	1/1:1,9:10:24.02:233,24,0	0/1:1,6:7:2.99:154,0,3
chr10	17519900	.	T	TC	28709.13	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-8.877;DP=744;FS=25.913;HRun=1;HaplotypeScore=66.6390;InbreedingCoeff=0.9996;MQ=85.01;MQ0=0;MQRankSum=-11.109;QD=41.19;ReadPosRankSum=6.533;VQSLOD=2.6497;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,47:48:99:1977,132,0	1/1:0,11:11:30.10:449,30,0	0/0:21,0:21:57.10:0,57,703	0/0:26,0:26:75.14:0,75,882	1/1:1,26:27:72.20:1053,72,0	1/1:0,31:31:84.28:1253,84,0	1/1:1,27:28:78.26:1169,78,0	1/1:2,37:39:99:1582,114,0	1/1:1,33:34:93.31:1381,93,0	1/1:1,24:25:72.15:1011,72,0	1/1:0,22:22:60.20:899,60,0	1/1:0,40:40:99:1618,108,0	1/1:1,28:29:81.27:1213,81,0	1/1:0,29:29:87.29:1302,87,0	1/1:1,32:33:93.32:1393,93,0	1/1:1,32:33:90.30:1348,90,0	1/1:0,28:27:75.25:1123,75,0	1/1:1,15:16:45.15:668,45,0	1/1:1,16:17:48.16:719,48,0	1/1:2,24:26:72.24:1071,72,0	1/1:0,35:35:93.32:1394,93,0	1/1:0,16:16:45.15:674,45,0	1/1:0,21:21:57.19:854,57,0	1/1:0,24:24:63.21:944,63,0	1/1:0,17:17:42.14:629,42,0	1/1:0,27:27:81.26:1190,81,0	1/1:0,30:30:87.29:1302,87,0	1/1:0,11:11:33.11:494,33,0
chr10	17520725	.	G	GTT	6697.52	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-3.373;DP=441;FS=20.755;HRun=13;HaplotypeScore=58.4280;InbreedingCoeff=0.6385;MQ=65.14;MQ0=10;MQRankSum=-1.178;QD=17.58;ReadPosRankSum=1.146;VQSLOD=2.0092;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,16:19:26.57:333,27,0	1/1:3,0:7:18.03:175,18,0	0/0:33,0:12:7.61:0,8,46	0/0:27,0:10:7.87:0,8,50	1/1:11,0:21:33.48:321,33,0	1/1:3,11:19:38.09:433,38,0	1/1:1,2:6:9.02:110,9,0	1/1:12,7:20:26.47:316,26,0	1/1:3,1:11:1.50:55,1,0	1/1:11,1:17:27.03:280,27,0	1/1:14,0:20:21.04:215,21,0	1/1:1,9:11:12.03:151,12,0	1/1:3,16:19:27.06:367,27,0	1/1:2,5:8:14.53:170,15,0	1/1:3,5:11:14.54:172,15,0	1/1:3,4:9:12.04:162,12,0	1/1:13,0:20:18.45:163,18,0	1/1:3,21:24:39.13:529,39,0	1/1:8,5:14:29.85:316,30,0	1/1:4,14:21:50.99:588,51,0	1/1:4,2:8:6.02:74,6,0	1/1:2,2:4:6.02:82,6,0	1/1:1,11:12:32.59:416,33,0	1/1:2,3:5:9.03:122,9,0	1/1:4,11:19:35.54:415,36,0	1/1:12,0:27:42.06:421,42,0	1/1:5,0:14:24.03:228,24,0	1/1:0,0:4:9.01:85,9,0
chr10	17521539	.	TCA	T	16640.12	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-1.324;DP=694;FS=6.312;HRun=0;HaplotypeScore=107.2889;InbreedingCoeff=0.9892;MQ=69.17;MQ0=2;MQRankSum=-6.833;QD=25.96;ReadPosRankSum=6.638;VQSLOD=5.2040;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,29:38:43.22:753,43,0	1/1:1,11:12:24.07:295,24,0	0/0:29,0:27:53.96:0,54,739	0/0:24,0:22:51.63:0,52,758	1/1:5,31:36:87.27:1068,87,0	1/1:6,19:25:42.13:517,42,0	1/1:2,16:18:42.13:515,42,0	1/1:8,22:30:66.18:778,66,0	1/1:7,23:30:48.02:591,48,0	1/1:6,30:36:87.23:1024,87,0	1/1:1,17:18:45.14:551,45,0	1/1:4,28:32:78.24:956,78,0	1/1:3,22:25:54.17:665,54,0	1/1:1,25:26:66.21:812,66,0	1/1:2,29:31:84.26:1034,84,0	1/1:4,19:23:36.26:576,36,0	1/1:2,8:11:23.91:273,24,0	1/1:2,14:16:33.06:389,33,0	1/1:4,10:14:30.09:369,30,0	1/1:1,21:22:45.14:552,45,0	1/1:7,23:30:48.15:591,48,0	1/1:3,14:18:42.12:500,42,0	1/1:2,19:20:42.13:517,42,0	1/1:8,22:30:63.20:771,63,0	1/1:3,30:33:81.25:997,81,0	1/1:6,19:24:54.17:665,54,0	1/1:7,25:33:57.18:696,57,0	1/1:1,7:8:15.05:185,15,0
chr10	17521952	.	GTGCAT	G	35626.51	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=8.191;DP=753;FS=1.176;HRun=0;HaplotypeScore=163.7273;InbreedingCoeff=0.9968;MQ=83.12;MQ0=0;MQRankSum=-11.410;QD=50.82;ReadPosRankSum=7.345;VQSLOD=4.6687;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,55:59:99:2681,129,0	1/1:0,10:10:21.06:447,21,0	0/0:22,0:22:60.19:0,60,1693	0/0:30,0:30:81.28:0,81,2296	1/1:2,37:39:86.95:1521,87,0	1/1:2,18:20:45.11:915,45,0	1/1:3,22:25:48.16:1010,48,0	1/1:2,29:31:87.28:1734,87,0	1/1:1,30:31:81.28:1726,81,0	1/1:1,24:25:72.24:1486,72,0	1/1:0,14:14:39.01:740,39,0	1/1:0,34:34:96.33:2045,96,0	1/1:3,17:20:45.15:959,45,0	1/1:0,15:15:39.13:831,39,0	1/1:0,38:38:99:2086,99,0	1/1:1,30:31:90.31:1918,90,0	1/1:0,31:31:69.24:1462,69,0	1/1:0,24:24:57.20:1215,57,0	1/1:1,17:18:51.15:992,51,0	1/1:1,38:39:99:2148,105,0	1/1:0,23:23:43.94:957,44,0	1/1:0,22:22:56.92:1082,57,0	1/1:1,30:31:74.94:1386,75,0	1/1:1,31:32:78.14:1619,78,0	1/1:3,26:29:66.23:1407,66,0	1/1:1,24:25:72.25:1534,72,0	1/1:1,24:25:57.20:1215,57,0	1/1:0,10:10:24.08:511,24,0
chr10	17526115	.	TTTAA	T	4520.62	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=9.520;DP=308;FS=16.338;HRun=0;HaplotypeScore=56.0935;InbreedingCoeff=0.8901;MQ=73.83;MQ0=1;MQRankSum=-0.789;QD=38.64;ReadPosRankSum=2.609;VQSLOD=3.3209;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:33.09:0,33,792	1/1:0,2:2:6.02:92,6,0	0/0:14,0:7:11.97:0,12,143	0/0:11,0:9:15.67:0,16,225	1/1:1,12:13:36.12:609,36,0	0/0:16,0:16:45.14:0,45,1072	0/0:6,0:6:15.05:0,15,347	0/0:29,0:29:67.69:0,68,1631	0/0:7,0:7:18.06:0,18,434	1/1:4,13:17:39.10:648,39,0	1/1:1,8:9:24.08:363,24,0	0/0:6,0:6:12.04:0,12,307	0/0:5,0:5:12.04:0,12,307	0/0:3,0:3:9.02:0,9,179	0/0:10,0:10:30.10:0,30,664	0/0:9,0:9:21.06:0,21,487	1/1:4,26:30:53.91:900,54,0	0/0:11,0:11:27.09:0,27,687	0/0:13,0:13:33.11:0,33,827	0/0:8,0:8:24.08:0,24,570	0/0:4,0:4:12.03:0,12,256	0/0:1,0:1:3.01:0,3,77	0/0:4,0:4:12.04:0,12,264	0/0:3,0:3:6.02:0,6,140	0/0:16,0:16:48.16:0,48,1179	1/1:2,18:20:54.18:943,54,0	1/1:3,18:19:42.14:748,42,0	1/1:0,5:5:12.04:218,12,0
chr10	17526244	.	G	GT	1138.96	PASS	AB=0.961;AC=33;AF=0.589;AN=56;BaseQRankSum=-4.100;DP=370;FS=4.212;HRun=8;HaplotypeScore=101.6601;InbreedingCoeff=0.3181;MQ=65.21;MQ0=4;MQRankSum=0.767;QD=3.90;ReadPosRankSum=1.025;VQSLOD=0.3394;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:15,0:13:15.10:17,0,15	0/1:2,1:3:0:0,0,0	0/0:34,0:11:11.42:0,11,88	0/1:42,1:14:13.03:13,0,70	1/1:19,2:21:11.28:183,11,0	0/1:12,0:12:3.59:7,0,4	1/1:10,0:10:2.35:23,2,0	0/1:17,0:17:12:12,0,14	0/0:12,0:12:26.97:0,27,237	1/1:10,6:16:10.35:152,10,0	1/1:15,4:19:7.78:166,8,0	0/1:9,0:9:0.82:1,0,3	0/0:5,0:4:2.95:0,3,8	0/0:4,0:4:3:0,3,6	1/1:10,0:10:4.63:12,5,0	1/1:7,0:6:3.89:28,4,0	1/1:28,1:29:24.13:245,24,0	1/1:9,0:9:3.05:8,3,0	1/1:11,0:11:7.24:42,7,0	0/0:8,0:8:3.29:0,3,9	0/0:6,0:6:1.51:0,2,4	0/0:3,0:3:0.87:0,1,2	0/0:6,0:5:3.34:0,3,8	0/1:6,0:6:0.30:17,0,0	1/1:12,0:12:6.25:51,6,0	1/1:15,1:16:1.45:76,1,0	1/1:12,1:13:10.05:96,10,0	1/1:10,1:12:10.21:138,10,0
chr10	17526252	.	TG	T	5291.04	PASS	AB=0.974;AC=53;AF=0.946;AN=56;BaseQRankSum=-5.240;DP=426;FS=4.913;HRun=1;HaplotypeScore=98.3611;InbreedingCoeff=0.0476;MQ=61.54;MQ0=9;MQRankSum=-0.038;QD=12.42;ReadPosRankSum=-1.958;VQSLOD=2.8691;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:17,2:18:41.49:345,41,0	1/1:4,0:4:8.97:72,9,0	0/1:42,2:8:5.38:5,0,67	0/1:51,2:17:19.63:20,0,39	1/1:14,5:19:47.84:290,48,0	1/1:12,0:14:33.75:259,34,0	1/1:8,2:10:27.55:200,28,0	1/1:18,0:18:43.78:306,44,0	0/1:13,0:13:29.28:29,0,44	1/1:18,2:19:43.58:299,44,0	1/1:19,3:21:51.87:347,52,0	1/1:8,1:9:23.43:191,23,0	1/1:5,1:5:14.91:117,15,0	1/1:5,0:5:15.01:141,15,0	1/1:8,1:10:23.33:157,23,0	1/1:6,1:7:5.97:46,6,0	1/1:31,2:33:82.17:596,82,0	1/1:10,0:10:16.04:111,16,0	1/1:13,1:13:33.61:255,34,0	1/1:0,12:12:29.64:217,30,0	1/1:4,0:4:8.93:66,9,0	1/1:0,3:3:5.97:46,6,0	1/1:3,5:7:17.99:160,18,0	1/1:7,1:8:11.88:92,12,0	1/1:13,1:14:33.49:244,33,0	1/1:10,3:13:29.61:225,30,0	1/1:18,1:18:45.32:309,45,0	1/1:11,1:12:18.57:145,19,0
chr10	17526254	.	TTTTTG	T	3549.69	PASS	AB=1.000;AC=42;AF=0.750;AN=56;BaseQRankSum=-5.132;DP=456;FS=12.349;HRun=0;HaplotypeScore=132.9862;InbreedingCoeff=0.2133;MQ=61.34;MQ0=10;MQRankSum=0.572;QD=9.08;ReadPosRankSum=-2.572;VQSLOD=1.3153;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,1:18:35.29:348,35,0	0/1:5,0:5:10.08:10,0,50	0/1:47,0:8:9.42:9,0,43	0/1:59,0:18:53.74:60,0,54	0/1:20,0:20:4.52:5,0,304	1/1:16,0:16:26.06:291,26,0	1/1:10,1:11:20.99:195,21,0	1/1:21,0:21:5.19:174,5,0	1/1:14,0:14:38.93:437,39,0	0/1:20,0:19:22.17:22,0,274	0/1:22,0:21:70.77:71,0,254	1/1:9,0:9:20.57:179,21,0	1/1:6,0:5:11.94:117,12,0	1/1:5,0:5:15.02:150,15,0	1/1:11,1:12:25.09:256,25,0	1/1:8,1:8:6.01:58,6,0	0/0:34,0:34:46.52:0,47,765	1/1:13,0:13:16.89:154,17,0	1/1:14,0:13:17.04:172,17,0	0/1:12,0:12:9.88:107,0,10	1/1:4,0:4:3.01:34,3,0	1/1:3,0:3:3.01:42,3,0	1/1:9,0:8:18.05:272,18,0	1/1:7,0:7:7.65:67,8,0	1/1:17,1:18:34.17:294,34,0	0/1:14,0:14:24.43:24,0,175	0/0:19,0:18:13.53:0,14,366	0/0:12,0:12:28.88:0,29,372
chr10	17526255	.	TTTTG	T	3726.81	PASS	AB=1.000;AC=43;AF=0.768;AN=56;BaseQRankSum=-4.644;DP=457;FS=10.361;HRun=0;HaplotypeScore=126.0719;InbreedingCoeff=0.3099;MQ=61.26;MQ0=10;MQRankSum=0.296;QD=10.27;ReadPosRankSum=-2.831;VQSLOD=2.0402;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:17:38.01:369,38,0	0/1:5,0:5:3.15:3,0,24	0/0:49,0:8:5.09:0,5,51	0/1:59,0:18:41.43:45,0,41	0/1:20,0:20:42.84:43,0,143	1/1:15,0:15:25.44:257,25,0	1/1:11,0:11:21.46:203,21,0	1/1:23,0:23:32.86:252,33,0	1/1:5,9:14:39.11:592,39,0	0/1:20,0:19:7.48:7,0,160	0/1:22,0:21:87.95:88,0,124	1/1:9,0:9:20.64:194,21,0	1/1:6,0:5:11.96:111,12,0	1/1:5,0:5:15.03:155,15,0	1/1:13,0:13:24.38:219,24,0	1/1:9,0:8:6:53,6,0	0/0:33,0:33:40.05:0,40,437	1/1:13,0:13:13.74:123,14,0	1/1:14,0:13:15.45:204,15,0	1/1:12,0:12:15.51:149,16,0	1/1:4,0:4:2.99:23,3,0	1/1:3,0:3:3.01:46,3,0	1/1:6,3:8:18.05:222,18,0	1/1:7,0:7:8.73:87,9,0	1/1:18,0:18:33.19:270,33,0	0/1:14,0:14:2.81:3,0,123	0/1:19,0:18:10.05:10,0,180	0/0:12,0:12:21.39:0,21,257
chr10	17526258	.	TG	T	5281.16	PASS	AB=0.985;AC=52;AF=0.929;AN=56;BaseQRankSum=-1.311;DP=461;FS=3.024;HRun=1;HaplotypeScore=103.8699;InbreedingCoeff=0.2490;MQ=62.81;MQ0=11;MQRankSum=0.331;QD=12.98;ReadPosRankSum=0.152;VQSLOD=3.7191;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:17:39.80:319,40,0	1/1:5,0:5:10.87:64,11,0	0/0:52,1:10:5.66:0,6,27	0/1:61,2:18:20.75:57,0,21	1/1:18,2:20:37.53:283,38,0	1/1:13,1:14:38.76:267,39,0	1/1:10,0:10:29.84:233,30,0	1/1:1,22:23:53.18:386,53,0	1/1:14,0:14:38.02:299,38,0	1/1:21,0:20:15.54:167,16,0	1/1:22,0:21:40.56:252,41,0	1/1:8,0:8:20.38:157,20,0	1/1:5,0:4:11.93:91,12,0	1/1:5,0:5:15.01:137,15,0	1/1:12,1:13:35.90:258,36,0	1/1:9,0:8:7.21:50,7,0	1/1:30,0:30:61:449,61,0	1/1:14,0:14:27.61:192,28,0	1/1:14,0:13:33.96:261,34,0	1/1:12,0:12:29.73:230,30,0	1/1:4,0:4:3:27,3,0	1/1:2,0:2:3:25,3,0	1/1:9,0:8:19.23:158,19,0	1/1:6,0:6:8.88:65,9,0	1/1:18,1:19:49.75:370,50,0	1/1:15,0:15:11.26:165,11,0	1/1:19,0:18:42.40:249,42,0	0/1:12,0:12:16.77:70,0,17
chr10	17526259	.	GTT	G	770.70	PASS	AB=0.963;AC=29;AF=0.518;AN=56;BaseQRankSum=1.134;DP=458;FS=1.110;HRun=16;HaplotypeScore=121.6278;InbreedingCoeff=-0.0526;MQ=62.69;MQ0=12;MQRankSum=-0.213;QD=2.47;ReadPosRankSum=2.213;VQSLOD=-0.1819;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:19,0:17:2.61:19,0,3	1/1:5,0:5:3.74:52,4,0	0/0:56,0:10:3.11:0,3,40	0/1:63,0:18:2.16:2,0,24	0/1:17,1:20:38.26:81,0,38	0/1:14,0:14:8.35:8,0,104	0/1:10,0:10:4.04:4,0,18	0/0:23,0:23:9.94:0,10,46	1/1:13,0:13:15.23:96,15,0	0/1:19,1:19:34.59:35,0,85	0/1:19,2:20:8.93:157,0,9	0/1:8,0:8:4.06:9,0,4	1/1:5,0:4:0.94:8,1,0	1/1:5,0:5:6.32:25,6,0	0/0:14,0:14:5.31:0,5,93	0/0:8,0:7:2.49:0,2,19	0/1:29,1:30:99:142,0,182	0/0:14,0:14:8.85:0,9,137	0/0:13,0:12:6.89:0,7,47	1/1:12,0:12:6.04:30,6,0	1/1:4,0:4:2.90:17,3,0	1/1:2,0:2:2.74:12,3,0	0/1:9,0:8:6.78:24,0,7	1/1:5,0:5:1.65:7,2,0	0/0:18,0:18:8.54:0,9,132	0/1:13,2:15:37.44:39,0,37	0/1:17,1:17:82.29:145,0,82	0/1:13,0:13:13.64:14,0,158
chr10	17526279	.	A	AT	1748.52	PASS	AB=0.883;AC=25;AF=0.446;AN=56;BaseQRankSum=-0.059;DP=449;FS=3.895;HRun=10;HaplotypeScore=109.3740;InbreedingCoeff=0.6336;MQ=59.29;MQ0=11;MQRankSum=-2.316;QD=8.57;ReadPosRankSum=1.321;VQSLOD=2.4593;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:13,5:16:7.99:114,0,8	0/0:6,0:6:14.96:0,15,120	0/1:43,0:11:5.86:6,0,57	0/0:49,0:12:12.02:0,12,97	0/0:14,0:15:27.65:0,28,208	1/1:6,10:16:21.90:278,22,0	1/1:5,5:10:21.05:222,21,0	0/0:27,0:27:59.10:0,59,467	1/1:3,12:15:33.08:349,33,0	0/0:21,0:20:35.81:0,36,291	0/0:16,0:18:30.96:0,31,232	1/1:6,1:7:3.01:32,3,0	1/1:3,6:8:9.02:96,9,0	1/1:3,2:5:6.02:64,6,0	1/1:8,10:18:15.04:160,15,0	0/1:10,1:10:12.61:83,0,13	0/0:29,0:29:48.06:0,48,409	1/1:8,4:12:9.02:96,9,0	0/0:6,0:5:14.98:0,15,123	0/0:11,0:11:20.90:0,21,166	0/0:7,0:7:11.99:0,12,98	0/1:2,0:2:0:0,0,0	0/1:9,5:13:3:128,0,3	1/1:4,1:5:3.47:33,3,0	1/1:6,10:16:12.68:284,13,0	0/0:17,0:17:23.73:0,24,196	0/0:26,0:24:49.37:0,49,411	0/0:12,0:12:10.45:0,10,75
chr10	17526947	.	GA	G	14366.21	PASS	AB=0.929;AC=53;AF=0.946;AN=56;BaseQRankSum=-2.167;DP=614;FS=11.204;HRun=8;HaplotypeScore=67.6442;InbreedingCoeff=0.7664;MQ=79.71;MQ0=0;MQRankSum=-6.770;QD=24.14;ReadPosRankSum=4.530;VQSLOD=4.9766;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,30:32:90.14:869,90,0	1/1:1,13:14:33.05:319,33,0	0/0:19,0:19:18.02:0,18,202	0/1:12,1:13:3.27:3,0,239	1/1:4,28:32:78.12:753,78,0	1/1:2,17:19:48.08:464,48,0	1/1:2,15:17:45.07:435,45,0	1/1:7,32:39:96.11:915,96,0	1/1:0,17:17:51.08:492,51,0	1/1:3,23:26:69.11:666,69,0	1/1:2,31:33:84.12:811,84,0	1/1:0,15:15:45.07:435,45,0	1/1:3,17:20:48.08:464,48,0	1/1:0,16:16:39.06:376,39,0	1/1:5,21:26:57.08:550,57,0	1/1:0,21:21:60.10:579,60,0	1/1:1,26:27:72.11:695,72,0	1/1:0,14:14:42.07:405,42,0	1/1:2,21:23:63.02:583,63,0	1/1:3,36:39:99:937,99,0	1/1:3,10:13:24.04:232,24,0	1/1:3,19:22:51.08:492,51,0	1/1:4,31:35:84.12:811,84,0	1/1:0,7:7:15.02:145,15,0	1/1:2,29:31:87.14:840,87,0	1/1:6,18:24:54.06:517,54,0	1/1:0,12:12:36.06:348,36,0	1/1:0,8:8:24.04:232,24,0
chr10	17528481	.	CTCTCTCTCTT	C	3116.39	PASS	AB=0.948;AC=29;AF=0.518;AN=56;BaseQRankSum=-1.146;DP=382;FS=1.265;HRun=0;HaplotypeScore=110.3852;InbreedingCoeff=0.1453;MQ=49.45;MQ0=14;MQRankSum=-1.556;QD=15.74;ReadPosRankSum=1.793;VQSLOD=2.2584;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:0,15:15:24.08:693,24,0	1/1:1,0:1:2.94:18,3,0	0/0:54,0:23:33.02:0,33,781	0/0:75,0:16:12.38:0,12,405	0/1:12,0:11:15.96:16,0,80	0/1:5,0:5:19.44:19,0,33	0/1:8,0:7:14.16:61,0,14	1/1:13,0:13:22.77:225,23,0	0/1:18,0:19:41.60:42,0,131	0/0:16,0:16:13.24:0,13,510	0/1:11,0:11:13.89:14,0,142	0/1:8,4:12:1.04:393,0,1	0/1:5,3:8:47.98:281,0,48	1/1:4,7:11:24.07:646,24,0	1/1:6,0:6:4.12:18,4,0	0/1:7,0:7:15.93:16,0,85	0/0:8,0:8:2.01:0,2,130	0/0:6,0:5:11.31:0,11,98	0/1:9,0:7:8.16:127,0,8	1/1:5,0:5:2.07:7,2,0	0/1:26,0:25:2.15:79,0,2	1/1:2,5:7:9.03:199,9,0	1/1:0,9:9:8.76:241,9,0	1/1:1,9:10:6.02:189,6,0	0/1:4,0:4:0:0,0,0	0/0:18,0:18:9.07:0,9,338	0/0:5,0:5:3.85:0,4,180	0/0:1,0:1:3.01:0,3,84
chr10	17528483	.	CTCTCTCTT	C	2649.94	PASS	AB=0.985;AC=34;AF=0.607;AN=56;BaseQRankSum=-0.569;DP=385;FS=0.606;HRun=0;HaplotypeScore=103.6873;InbreedingCoeff=0.0137;MQ=48.49;MQ0=15;MQRankSum=-0.436;QD=10.95;ReadPosRankSum=0.646;VQSLOD=2.2783;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:15:24.06:414,24,0	1/1:1,0:1:2.94:18,3,0	0/0:55,0:23:8.11:0,8,802	0/0:76,0:15:10.84:0,11,351	0/1:11,0:10:15.98:16,0,41	0/0:5,0:5:2.77:0,3,41	0/1:8,0:7:10.90:48,0,11	1/1:2,10:12:30.07:553,30,0	0/1:19,0:19:24.26:24,0,105	0/1:17,0:17:4.40:4,0,352	0/1:11,0:11:14.01:14,0,135	1/1:12,0:12:11.65:266,12,0	0/1:8,0:8:29.07:171,0,29	1/1:11,0:11:24.06:399,24,0	1/1:7,0:7:2.13:5,2,0	0/1:7,0:7:15.94:16,0,66	0/1:9,0:9:44.43:44,0,70	0/1:7,0:6:23.52:24,0,45	0/1:7,2:7:7.99:221,0,8	1/1:0,5:5:3.01:54,3,0	1/1:25,0:24:17.62:161,18,0	1/1:7,0:7:8.86:96,9,0	1/1:9,0:9:8.68:135,9,0	1/1:10,0:10:6.01:119,6,0	0/1:4,0:4:0:0,0,0	0/1:18,0:18:9.66:10,0,244	0/0:4,0:4:3.85:0,4,142	0/0:2,0:1:3.01:0,3,69
chr10	17528491	.	T	TCTCTC	1301.32	PASS	AB=0.968;AC=24;AF=0.429;AN=56;BaseQRankSum=2.122;DP=372;FS=2.086;HRun=0;HaplotypeScore=106.2684;InbreedingCoeff=-0.4251;MQ=43.06;MQ0=13;MQRankSum=-2.437;QD=3.98;ReadPosRankSum=1.006;VQSLOD=2.1992;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:15,0:15:35.36:39,0,35	1/1:2,0:2:5.90:37,6,0	0/1:51,0:17:25.47:25,0,490	0/1:75,0:15:28.46:28,0,284	0/0:9,1:9:7.93:0,8,39	0/1:5,0:5:6.34:92,0,6	0/1:6,2:7:4.99:70,0,5	0/1:10,0:10:52.26:134,0,52	0/1:15,1:16:25.77:148,0,26	0/1:15,0:15:57.34:270,0,57	0/1:14,0:14:1.01:1,0,55	0/0:11,0:11:1.09:0,1,111	0/1:5,0:5:13.63:14,0,74	0/1:11,0:11:4.64:5,0,145	1/1:5,1:6:1.18:64,1,0	0/0:7,0:7:8.56:0,9,47	0/1:8,0:8:19.80:20,0,37	0/1:6,0:5:8.45:29,0,8	0/1:8,0:7:24.86:25,0,84	0/0:6,0:6:1.93:0,2,19	0/1:28,0:26:45.69:46,0,76	0/1:8,0:8:0.38:0,0,47	0/1:10,0:10:10.31:16,0,10	0/0:9,0:9:6.01:0,6,59	0/1:5,0:5:0:0,0,0	0/1:14,1:15:15.80:318,0,16	0/1:3,1:4:14.57:61,0,15	0/0:2,0:1:2.92:0,3,17
chr10	17528508	.	TCCTTCC	T	764.86	PASS	AB=0.971;AC=14;AF=0.250;AN=56;BaseQRankSum=-0.381;DP=401;FS=33.177;HRun=0;HaplotypeScore=106.9482;InbreedingCoeff=-0.1139;MQ=32.18;MQ0=13;MQRankSum=-0.848;QD=3.27;ReadPosRankSum=0.475;VQSLOD=0.4294;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:27.33:0,27,301	0/0:5,0:5:9.63:0,10,60	0/1:42,0:13:10.75:11,0,382	0/1:68,0:11:75.51:76,0,262	0/1:6,1:6:0:0,0,0	1/1:2,1:3:3.72:109,4,0	0/1:10,0:9:67.09:67,0,90	0/0:13,0:13:16.56:0,17,338	0/1:14,0:14:99:147,0,235	0/1:12,2:14:99:247,0,465	0/1:14,0:13:9.58:10,0,125	0/1:9,0:9:0.15:0,0,306	0/0:7,0:7:14.31:0,14,197	0/0:18,0:18:21.59:0,22,275	0/1:9,0:9:11.41:11,0,178	0/0:7,0:7:5.98:0,6,89	0/1:14,0:13:3.87:4,0,289	0/0:5,0:4:6.41:0,6,86	0/0:7,0:6:15.03:0,15,170	0/0:12,0:12:17.80:0,18,151	0/0:29,0:27:14.23:0,14,188	0/0:13,0:13:16.43:0,16,171	0/1:11,0:11:3.98:4,0,104	0/0:16,0:16:10.88:0,11,135	0/0:3,0:3:9.02:0,9,134	0/1:16,1:17:99:217,0,257	0/0:8,0:8:15:0,15,199	0/0:3,0:2:6.02:0,6,168
chr10	17528533	.	CTCT	C	534.27	PASS	AB=0.750;AC=11;AF=0.196;AN=56;BaseQRankSum=4.090;DP=399;FS=4.401;HRun=0;HaplotypeScore=97.4756;InbreedingCoeff=0.8069;MQ=54.87;MQ0=8;MQRankSum=0.268;QD=10.27;ReadPosRankSum=-2.354;VQSLOD=2.4635;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:43.69:0,44,849	0/0:6,0:6:18.06:0,18,406	0/0:30,0:13:23.40:0,23,552	0/0:48,1:22:47.91:0,48,961	0/0:10,0:10:21.07:0,21,370	1/1:4,0:4:8.51:42,9,0	1/1:14,4:17:37.22:261,37,0	0/0:13,0:12:33.09:0,33,684	0/0:12,0:12:28.38:0,28,524	0/0:12,0:12:30.07:0,30,585	0/0:8,0:8:11.19:0,11,210	0/0:17,0:17:51.17:0,51,1079	0/0:8,0:8:24.08:0,24,550	0/0:25,0:25:52.74:0,53,1169	1/1:11,3:13:24.46:207,24,0	1/1:4,2:6:3.69:15,4,0	0/0:17,1:17:45.87:0,46,847	0/1:2,1:3:26.81:31,0,27	0/0:11,0:9:24.08:0,24,447	0/0:15,0:15:29.83:0,30,634	0/0:27,0:26:39.13:0,39,834	0/0:10,0:10:27.09:0,27,603	0/0:8,0:8:21.05:0,21,478	0/0:23,0:22:48.16:0,48,1027	1/1:4,3:7:17.17:143,17,0	0/0:12,0:12:24.08:0,24,558	0/0:11,0:11:21.75:0,22,513	0/0:3,0:3:9.03:0,9,177
chr10	17528537	.	CCT	C	77.79	PASS	AB=0.969;AC=8;AF=0.143;AN=56;BaseQRankSum=5.450;DP=402;FS=4.153;HRun=0;HaplotypeScore=93.2867;InbreedingCoeff=0.0685;MQ=57.00;MQ0=8;MQRankSum=-1.836;QD=0.57;ReadPosRankSum=0.242;VQSLOD=1.4260;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:46.88:0,47,774	0/0:6,0:6:18.06:0,18,355	0/1:32,0:15:10.88:11,0,468	0/1:43,1:23:44.43:44,0,753	0/0:10,0:10:21.07:0,21,382	0/0:5,0:5:9.32:0,9,41	0/1:16,0:16:15.08:15,0,85	0/1:14,2:15:40.83:41,0,519	0/0:13,0:13:20.26:0,20,500	0/0:11,0:11:29.94:0,30,499	0/0:7,0:7:14.98:0,15,196	0/0:19,0:19:57.14:0,57,984	0/0:8,0:8:24.08:0,24,448	0/0:23,1:24:52.95:0,53,989	0/1:14,0:13:27.59:28,0,53	0/0:6,0:6:14.31:0,14,82	0/0:18,0:17:47.16:0,47,784	1/1:2,1:3:6.32:52,6,0	0/0:13,0:11:26.96:0,27,441	0/0:16,0:16:35.82:0,36,592	0/0:25,0:24:42.10:0,42,747	0/0:10,0:10:27.07:0,27,510	0/0:8,0:8:24.08:0,24,445	0/0:23,0:22:47.84:0,48,868	0/1:7,0:7:20.54:21,0,29	0/0:11,0:11:24.08:0,24,464	0/0:12,0:12:23.62:0,24,451	0/0:3,0:3:8.94:0,9,118
chr10	17528549	.	CTCCTG	C	130.57	PASS	AB=0.903;AC=9;AF=0.161;AN=56;BaseQRankSum=6.291;DP=445;FS=22.200;HRun=0;HaplotypeScore=114.6453;InbreedingCoeff=-0.1829;MQ=64.95;MQ0=4;MQRankSum=-2.770;QD=1.35;ReadPosRankSum=-4.100;VQSLOD=-0.4661;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:48.63:0,49,1357	0/0:7,0:7:21.04:0,21,571	0/0:45,0:22:16.05:0,16,940	0/0:60,0:31:47.36:0,47,1663	0/0:13,0:13:33.09:0,33,947	0/0:7,0:7:21.07:0,21,539	0/0:19,0:19:54.17:0,54,1175	0/0:19,0:19:48.16:0,48,1255	0/1:12,1:13:69.43:69,0,653	0/1:12,1:13:31.40:31,0,799	0/1:7,2:9:32.07:32,0,419	0/0:21,0:21:52.42:0,52,1671	0/0:9,0:9:23.96:0,24,561	0/0:23,0:23:63.22:0,63,1910	0/0:12,0:12:30.10:0,30,609	0/0:3,0:3:9.03:0,9,180	0/0:16,0:17:40.02:0,40,1185	0/1:6,0:6:11.33:11,0,192	0/1:11,0:11:5.61:6,0,741	0/0:13,0:13:28.33:0,28,888	0/1:18,3:20:33.89:34,0,1088	0/1:11,1:12:5.66:6,0,951	0/1:8,1:9:20.25:20,0,712	0/0:24,0:23:57.67:0,58,1709	0/0:7,0:7:21.06:0,21,399	0/0:13,0:13:27.12:0,27,869	0/0:12,0:12:32.85:0,33,904	0/1:2,1:3:55.46:55,0,181
chr10	17530562	.	CG	C	5205.43	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=12.345;DP=618;FS=0.733;HRun=2;HaplotypeScore=59.5996;InbreedingCoeff=0.9981;MQ=92.81;MQ0=0;MQRankSum=-3.840;QD=36.15;ReadPosRankSum=2.546;VQSLOD=5.4136;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,30:30:84.27:1090,84,0	0/0:14,0:14:42.14:0,42,626	0/0:26,0:26:72.17:0,72,1016	0/0:27,0:27:77.06:0,77,1075	0/0:21,0:21:63.21:0,63,942	0/0:29,0:29:87.29:0,87,1303	0/0:22,0:22:66.22:0,66,987	0/0:29,0:29:78.26:0,78,1149	0/0:23,0:23:69.22:0,69,1011	0/0:17,0:17:51.17:0,51,764	0/0:15,0:15:45.15:0,45,674	1/1:0,17:17:45.15:584,45,0	1/1:0,19:19:54.18:700,54,0	1/1:0,30:30:90.29:1167,90,0	0/0:26,0:26:78.25:0,78,1146	0/0:24,0:24:69.21:0,69,1010	0/0:28,0:28:84.28:0,84,1258	0/0:24,0:24:69.71:0,70,1034	0/0:14,0:14:42.13:0,42,607	0/0:15,0:15:45.15:0,45,674	0/0:41,0:41:99:0,123,1777	1/1:0,10:10:24.08:312,24,0	1/1:1,16:17:48.15:612,48,0	1/1:0,21:21:57.19:740,57,0	0/0:23,0:23:69.23:0,69,1033	0/0:22,0:22:66.21:0,66,968	0/0:28,0:28:84.27:0,84,1220	0/0:6,0:6:18.06:0,18,270
chr10	17532601	.	TGC	T	384.09	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=1.856;DP=439;FS=0.711;HRun=0;HaplotypeScore=182.9817;InbreedingCoeff=0.5807;MQ=39.55;MQ0=11;MQRankSum=-1.081;QD=3.66;ReadPosRankSum=-0.704;VQSLOD=2.4899;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:20:11.68:0,12,166	0/0:9,0:9:5.92:0,6,39	0/0:15,0:6:17.64:0,18,246	0/0:24,0:13:28.48:0,28,455	0/0:19,0:19:16.12:0,16,144	1/1:8,9:17:3:29,3,0	1/1:13,3:15:8.96:70,9,0	0/0:17,0:15:38.87:0,39,512	0/0:13,0:13:9.26:0,9,104	0/0:21,0:21:18.37:0,18,227	0/0:11,0:11:8.99:0,9,108	0/1:23,0:23:7.98:8,0,35	0/0:18,0:17:17.37:0,17,199	0/0:18,0:18:1.03:0,1,107	1/1:4,1:5:2.99:24,3,0	1/1:5,2:7:8.93:67,9,0	0/0:25,0:25:21.89:0,22,152	1/1:10,7:17:33.64:292,34,0	0/0:11,0:10:21.89:0,22,283	0/0:8,0:8:3.01:0,3,49	0/0:21,0:17:5.99:0,6,68	0/0:7,0:6:9.01:0,9,118	0/0:14,0:14:10.67:0,11,61	0/0:15,0:15:2.85:0,3,25	1/1:9,11:20:8.01:52,8,0	0/0:16,0:16:5.22:0,5,210	0/0:18,0:18:41.06:0,41,268	0/0:13,0:13:3.94:0,4,153
chr10	17532607	.	TGC	T	2045.82	PASS	AB=0.877;AC=39;AF=0.750;AN=52;BaseQRankSum=0.459;DP=404;FS=4.769;HRun=0;HaplotypeScore=176.0815;InbreedingCoeff=0.3973;MQ=36.99;MQ0=11;MQRankSum=2.254;QD=6.29;ReadPosRankSum=2.052;VQSLOD=3.3263;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:16,2:18:2.69:0,3,14	1/1:9,0:11:5.02:54,5,0	0/0:13,0:5:3.01:0,3,54	0/0:19,0:9:20.37:0,20,234	1/1:14,1:16:15:212,15,0	1/1:16,0:16:3:25,3,0	1/1:14,0:13:2.99:24,3,0	0/1:16,0:14:2.43:2,0,53	0/1:5,4:10:9.04:49,0,9	1/1:8,1:23:22.75:303,23,0	./.	1/1:19,2:23:16.44:168,16,0	1/1:13,3:16:13.07:63,13,0	1/1:16,2:18:6.54:85,7,0	./.	1/1:4,0:4:2.92:17,3,0	0/1:25,1:26:10.23:75,0,10	1/1:15,0:15:30.29:273,30,0	0/0:7,0:6:7.96:0,8,45	0/0:7,0:7:2.37:0,2,8	1/1:19,0:15:0.47:1,0,0	1/1:4,2:6:3:26,3,0	1/1:8,3:12:6.02:78,6,0	1/1:14,1:15:2.99:23,3,0	1/1:18,0:18:1.55:4,2,0	1/1:12,0:15:33.23:257,33,0	1/1:15,1:18:21.97:272,22,0	1/1:10,0:11:25.93:180,26,0
chr10	17532609	.	C	CGT	358.20	PASS	AB=0.989;AC=21;AF=0.389;AN=54;BaseQRankSum=-0.470;DP=396;FS=10.148;HRun=0;HaplotypeScore=181.9804;InbreedingCoeff=0.0757;MQ=36.68;MQ0=11;MQRankSum=-1.054;QD=1.49;ReadPosRankSum=-3.879;VQSLOD=0.5753;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:16,2:17:2.74:0,3,18	0/0:12,0:11:5.61:0,6,27	0/0:12,0:4:3.01:0,3,46	0/0:18,0:8:20.38:0,20,218	0/0:16,0:16:10.03:0,10,31	1/1:16,0:16:3:25,3,0	1/1:16,0:15:3.35:16,3,0	1/1:16,0:14:10.33:77,10,0	0/0:10,0:10:8.40:0,8,57	0/0:23,0:24:1.16:0,1,83	0/1:9,0:9:0:0,0,0	0/1:23,0:23:36.81:42,0,37	0/1:17,0:16:42.43:42,0,104	0/1:16,2:18:12.01:12,0,41	./.	0/0:4,0:4:0.47:0,0,1	0/1:24,0:26:47.11:47,0,65	1/1:14,0:14:4.23:83,4,0	0/0:5,0:4:5.51:0,6,30	1/1:7,0:7:2.88:15,3,0	1/1:18,0:15:3:25,3,0	0/0:6,0:5:2.87:0,3,18	0/0:11,1:12:5.27:0,5,22	0/0:12,2:14:2.92:0,3,17	0/1:18,0:18:0:0,0,0	0/1:13,0:14:20.40:20,0,139	0/1:17,0:17:9.28:9,0,208	0/1:8,0:11:43.95:87,0,44
chr10	17532615	.	TGCGC	T	741.06	PASS	AB=0.984;AC=31;AF=0.596;AN=52;BaseQRankSum=1.348;DP=393;FS=5.816;HRun=0;HaplotypeScore=188.2979;InbreedingCoeff=0.2553;MQ=34.90;MQ0=11;MQRankSum=0.331;QD=2.54;ReadPosRankSum=1.314;VQSLOD=2.0813;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:17:1.85:0,2,6	1/1:13,0:12:4.94:40,5,0	0/0:8,0:1:3.01:0,3,44	0/0:14,0:6:15.02:0,15,220	1/1:13,0:14:2.66:19,3,0	./.	0/1:12,0:11:0:0,0,0	1/1:14,0:12:3.07:27,3,0	0/1:11,0:11:11.34:11,0,31	0/1:24,0:25:54.07:91,0,54	0/1:9,0:9:0:0,0,0	0/1:22,1:23:1.88:22,0,2	0/0:14,3:16:7.67:0,8,145	0/0:17,0:17:2.90:0,3,20	./.	1/1:6,0:6:2.92:17,3,0	0/1:27,0:27:3.69:30,0,4	1/1:17,0:17:24.41:192,24,0	0/1:4,0:3:2.44:2,0,30	1/1:8,0:8:2.98:22,3,0	1/1:20,0:16:3:25,3,0	0/0:6,0:5:0.76:0,1,3	0/1:13,1:14:1.11:1,0,1	1/1:17,1:17:2.54:11,3,0	0/1:19,0:19:0:0,0,0	1/1:14,0:14:12.02:171,12,0	1/1:15,0:15:6.67:83,7,0	1/1:9,0:9:21.05:109,21,0
chr10	17532617	.	CGCGT	C	609.13	PASS	AB=0.986;AC=20;AF=0.400;AN=50;BaseQRankSum=1.142;DP=394;FS=1.766;HRun=0;HaplotypeScore=192.9792;InbreedingCoeff=0.2749;MQ=32.23;MQ0=11;MQRankSum=0.258;QD=2.71;ReadPosRankSum=2.463;VQSLOD=2.8598;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:18:2.97:0,3,21	1/1:13,0:12:5:67,5,0	0/0:8,0:1:2.99:0,3,24	0/0:11,0:4:11.87:0,12,157	1/1:14,0:14:2.93:23,3,0	./.	0/1:11,0:10:0:0,0,0	0/0:10,1:9:17.58:0,18,110	0/0:12,0:12:5.08:0,5,50	0/1:25,0:25:35:112,0,35	0/1:10,0:10:0:0,0,0	0/0:24,0:24:0.73:0,1,34	0/0:18,0:17:23.38:0,23,162	0/1:19,0:19:8.20:8,0,15	./.	0/0:4,2:6:1.25:0,1,3	0/1:28,0:28:7.30:12,0,7	1/1:14,3:17:1.52:150,2,0	0/0:6,0:4:5.18:0,5,59	0/1:8,0:8:0:0,0,0	0/1:14,2:13:0:0,0,0	0/0:5,0:4:2.92:0,3,17	0/0:13,0:13:4.33:0,4,14	1/1:19,1:19:2.85:23,3,0	./.	1/1:19,0:19:5.74:160,6,0	0/1:16,0:16:3.06:95,0,3	1/1:9,0:9:9.25:89,9,0
chr10	17532625	.	CGT	C	691.60	PASS	AB=0.923;AC=15;AF=0.375;AN=40;BaseQRankSum=4.489;DP=403;FS=0.000;HRun=0;HaplotypeScore=203.8096;InbreedingCoeff=0.2745;MQ=30.70;MQ0=12;MQRankSum=-0.767;QD=3.58;ReadPosRankSum=1.833;VQSLOD=2.7077;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:2.90:0,3,43	0/0:10,2:12:0.12:0,0,1	./.	0/0:8,0:3:2.98:0,3,21	0/1:8,4:12:0.05:0,0,0	./.	0/1:17,0:16:0.16:0,0,0	0/0:11,0:8:13.41:0,13,82	0/0:12,1:13:3.14:0,3,22	1/1:16,9:25:29.72:287,30,0	0/1:6,4:10:0:0,0,0	0/0:23,0:25:4.17:0,4,24	0/1:18,0:17:11.98:12,0,125	0/0:17,0:17:2.75:0,3,17	./.	./.	1/1:18,10:28:13.07:136,13,0	0/1:18,0:18:33.66:34,0,84	0/0:7,0:4:5.64:0,6,27	./.	./.	0/0:5,0:4:2.60:0,3,10	./.	0/1:22,0:21:0.15:0,0,0	./.	1/1:11,9:19:32.80:238,33,0	1/1:13,1:14:0.82:2,1,0	0/1:9,0:9:9.49:99,0,9
chr10	17532629	.	TGTGC	T	866.69	PASS	AB=0.967;AC=25;AF=0.568;AN=44;BaseQRankSum=1.287;DP=413;FS=8.485;HRun=0;HaplotypeScore=219.8452;InbreedingCoeff=0.3328;MQ=30.45;MQ0=13;MQRankSum=0.586;QD=3.20;ReadPosRankSum=2.005;VQSLOD=0.8743;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:2.97:0,3,20	1/1:9,3:11:5.23:48,5,0	./.	./.	0/1:15,1:16:0.06:1,0,0	./.	1/1:19,0:18:0.05:0,0,0	0/0:12,0:8:12.59:0,13,82	1/1:14,0:14:1.20:12,1,0	1/1:28,0:28:10.66:123,11,0	0/1:9,1:10:0:0,0,0	0/1:24,0:24:3.49:10,0,3	0/1:18,0:17:9.23:9,0,85	1/1:18,0:18:2.22:8,2,0	./.	./.	1/1:28,0:28:18.09:152,18,0	0/0:17,0:17:1.18:0,1,82	0/0:9,0:6:10.01:0,10,58	./.	0/1:20,0:16:0.02:0,0,0	1/1:4,0:3:2.50:9,2,0	0/1:13,0:13:0:0,0,0	0/0:22,0:21:0.19:0,0,0	0/0:18,0:18:0.47:0,0,1	1/1:18,3:20:33.57:302,34,0	1/1:13,2:15:22.69:194,23,0	0/1:10,0:11:13.20:117,0,13
chr10	17532631	.	TGC	T	947.35	PASS	AB=1.000;AC=27;AF=0.643;AN=42;BaseQRankSum=1.031;DP=403;FS=8.889;HRun=0;HaplotypeScore=217.7243;InbreedingCoeff=0.2423;MQ=30.22;MQ0=12;MQRankSum=0.612;QD=3.47;ReadPosRankSum=2.840;VQSLOD=1.5840;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:19:2.60:0,3,19	1/1:12,0:11:5.25:48,5,0	./.	./.	0/1:16,0:16:0.05:0,0,0	./.	0/1:18,0:17:0.23:0,0,0	0/0:12,0:8:0.42:0,0,63	1/1:10,3:13:3.94:22,4,0	1/1:25,1:26:6.35:141,6,0	0/1:10,0:10:0.01:0,0,0	1/1:22,0:22:4.44:32,4,0	0/1:18,0:17:41.16:86,0,41	1/1:18,0:18:2.22:8,2,0	./.	./.	1/1:29,0:29:8.70:113,9,0	0/0:17,0:17:3.30:0,3,59	0/1:8,0:6:24.19:24,0,41	./.	./.	1/1:4,0:3:2.50:9,2,0	0/1:11,0:11:0:0,0,0	0/1:22,0:21:0.15:0,0,0	0/0:17,0:17:0:0,0,0	1/1:20,0:19:32.24:249,32,0	1/1:15,0:15:22.73:194,23,0	1/1:10,0:11:1.13:126,1,0
chr10	17532659	.	TGCGCGCGCGCGC	T	5575.65	PASS	AB=0.824;AC=38;AF=0.792;AN=48;BaseQRankSum=3.296;DP=347;FS=12.435;HRun=0;HaplotypeScore=175.4929;InbreedingCoeff=0.3172;MQ=37.80;MQ0=5;MQRankSum=-1.679;QD=20.65;ReadPosRankSum=2.669;VQSLOD=3.3576;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:10,11:22:0.21:0,0,0	1/1:5,2:9:0.47:1,0,0	0/0:6,0:3:2.04:0,2,6	0/0:6,0:2:0.47:0,0,1	1/1:2,2:12:0.93:2,1,0	1/1:2,4:8:3.01:107,3,0	1/1:4,14:22:3.40:77,3,0	0/1:11,0:9:30.84:87,0,31	1/1:5,7:16:3.01:78,3,0	1/1:3,0:16:38.89:1137,39,0	1/1:2,0:5:0.46:1,0,0	1/1:9,4:16:11.04:212,11,0	1/1:7,9:15:19.88:515,20,0	1/1:7,8:15:0.47:1,0,0	./.	1/1:0,3:5:3.01:91,3,0	1/1:2,5:17:1.01:234,1,0	1/1:6,1:12:7.44:521,7,0	1/1:6,0:6:9.03:208,9,0	./.	0/0:17,1:17:0.47:0,0,1	./.	./.	1/1:17,5:22:0.94:2,1,0	0/0:1,8:11:0.47:0,0,1	1/1:6,5:20:50.12:1383,50,0	1/1:2,5:9:6.02:138,6,0	1/1:0,1:8:24.08:781,24,0
chr10	17532673	.	TGCGCGC	T	2703.16	PASS	AB=0.817;AC=38;AF=0.731;AN=52;BaseQRankSum=1.782;DP=330;FS=1.996;HRun=0;HaplotypeScore=172.4573;InbreedingCoeff=0.4092;MQ=47.28;MQ0=3;MQRankSum=-3.109;QD=9.94;ReadPosRankSum=2.806;VQSLOD=2.9768;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:20:2.89:24,3,0	0/0:5,2:7:1.24:0,1,3	0/0:10,0:5:3.01:0,3,31	0/0:10,0:5:6.19:0,6,30	0/1:7,6:13:0.01:1,0,0	1/1:11,0:11:4.87:76,5,0	1/1:23,0:23:3.39:29,3,0	1/1:12,0:12:3.26:30,3,0	1/1:17,0:17:3.01:46,3,0	1/1:5,11:16:39.13:578,39,0	0/1:5,3:8:0:0,0,0	1/1:9,0:9:6.02:93,6,0	1/1:13,0:13:18.01:216,18,0	0/1:10,1:12:0:0,0,0	./.	1/1:6,0:6:3.01:42,3,0	1/1:11,6:17:6.02:98,6,0	1/1:9,0:9:23.49:286,23,0	1/1:6,0:6:14.32:94,14,0	1/1:11,0:11:3:25,3,0	1/1:14,0:14:3.43:20,3,0	./.	0/0:7,0:7:0.47:0,0,1	0/1:10,0:10:0:0,0,0	0/0:11,0:11:0.47:0,0,1	1/1:13,8:21:43.82:665,44,0	1/1:11,2:13:8.92:94,9,0	1/1:7,4:11:24.03:391,24,0
chr10	17535173	.	T	TA	1984.09	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=-2.896;DP=513;FS=3.617;HRun=10;HaplotypeScore=72.9894;InbreedingCoeff=0.9388;MQ=69.69;MQ0=1;MQRankSum=0.314;QD=19.26;ReadPosRankSum=-3.351;VQSLOD=3.2579;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:29.96:0,30,246	0/0:10,0:10:26.93:0,27,216	0/0:9,0:9:11.97:0,12,97	0/1:3,0:4:0:0,0,0	0/0:22,0:23:49.94:0,50,398	0/0:24,0:24:56.87:0,57,461	0/0:10,0:10:26.97:0,27,222	1/1:10,29:39:59.45:782,59,0	0/0:14,0:14:38.95:0,39,320	0/0:26,0:26:62.91:0,63,517	0/0:20,0:20:53.92:0,54,443	0/0:15,0:15:38.95:0,39,318	0/0:21,0:21:59.91:0,60,489	0/0:9,0:9:26.97:0,27,222	0/0:25,0:25:59.91:0,60,493	0/0:14,0:14:35.92:0,36,292	0/0:33,0:33:83.85:0,84,684	0/0:16,0:15:35.94:0,36,295	1/1:3,19:24:41.31:616,41,0	1/1:4,20:24:57.06:583,57,0	1/1:2,10:12:15.04:160,15,0	0/0:6,0:6:14.97:0,15,121	0/0:12,0:12:29.62:0,30,230	0/0:13,0:13:32.92:0,33,266	0/0:26,0:26:68.90:0,69,566	0/0:20,0:21:52.97:0,53,425	0/0:25,0:25:65.83:0,66,527	0/0:26,0:26:74.91:0,75,616
chr10	17535806	.	G	GTGGTGAGT	21488.55	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-8.461;DP=786;FS=1.020;HRun=0;HaplotypeScore=221.6736;InbreedingCoeff=0.9973;MQ=77.55;MQ0=0;MQRankSum=-17.501;QD=104.82;ReadPosRankSum=0.555;VQSLOD=5.4200;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,111,3093	1/1:6,4:11:33.07:1113,33,0	0/0:27,0:27:78.14:0,78,1788	0/0:16,0:16:39.10:0,39,876	1/1:5,18:25:63.22:2369,63,0	0/0:23,0:23:60.19:0,60,1460	0/0:26,0:25:63.22:0,63,1759	0/0:35,0:35:99:0,105,2752	0/0:32,0:32:93.32:0,93,2547	1/1:9,21:34:90.31:3593,90,0	1/1:5,16:22:51.18:1895,51,0	0/0:36,0:36:99:0,102,2798	0/0:30,0:30:84.26:0,84,2357	0/0:28,0:28:75.26:0,75,2089	0/0:29,0:29:81.23:0,81,2172	0/0:31,0:31:84.24:0,84,2165	1/1:14,19:33:81.22:3135,81,0	0/0:14,0:14:39.13:0,39,1042	0/0:19,0:19:57.17:0,57,1520	0/0:31,0:31:87.30:0,87,2435	0/0:26,0:26:72.22:0,72,1896	0/0:42,0:42:99:0,123,3209	0/0:27,0:27:75.73:0,76,2049	0/0:37,0:37:99:0,99,2802	0/0:31,0:31:84.23:0,84,2163	1/1:9,28:38:99:4311,102,0	1/1:5,28:35:99:4404,105,0	1/1:0,6:7:15.05:669,15,0
chr10	17535807	.	T	TG	2973.60	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=18.282;DP=777;FS=1.443;HRun=2;HaplotypeScore=185.2450;InbreedingCoeff=0.9961;MQ=77.66;MQ0=0;MQRankSum=-17.703;QD=15.17;ReadPosRankSum=0.982;VQSLOD=3.6536;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,111,1435	1/1:11,0:11:20.96:202,21,0	0/0:27,0:27:78.24:0,78,979	0/0:16,0:16:42.13:0,42,527	1/1:25,0:25:61.23:553,61,0	0/0:23,0:23:60.18:0,60,763	0/0:26,0:25:63.20:0,63,818	0/0:36,0:36:99:0,105,1351	0/0:32,0:32:93.30:0,93,1202	1/1:30,0:30:56.88:473,57,0	1/1:21,0:21:30.75:413,31,0	0/0:36,0:36:99:0,105,1345	0/0:31,0:31:84.27:0,84,1086	0/0:28,0:28:78.23:0,78,996	0/0:29,0:29:81.23:0,81,1033	0/0:31,0:31:84.25:0,84,1072	1/1:30,3:33:71.92:435,72,0	0/0:14,0:14:42.12:0,42,529	0/0:19,0:19:57.19:0,57,739	0/0:29,0:29:87.28:0,87,1130	0/0:26,0:26:72.23:0,72,932	0/0:42,0:42:99:0,123,1577	0/0:27,0:27:78.24:0,78,998	0/0:37,0:37:99:0,105,1332	0/0:31,0:31:84.22:0,84,1055	1/1:36,0:36:59.55:525,60,0	1/1:34,1:35:74.52:506,75,0	1/1:5,0:5:14.38:76,14,0
chr10	17535859	.	TACAG	T	18488.98	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=9.117;DP=590;FS=0.000;HRun=0;HaplotypeScore=138.5268;InbreedingCoeff=0.9556;MQ=76.35;MQ0=0;MQRankSum=-5.328;QD=42.21;ReadPosRankSum=9.683;VQSLOD=4.3884;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,31:32:81.14:1470,81,0	1/1:0,11:11:30.10:560,30,0	0/0:17,0:16:35.88:0,36,648	0/0:18,0:17:46.55:0,47,684	1/1:4,14:18:18.39:337,18,0	1/1:3,16:19:33.11:616,33,0	1/1:0,27:27:66.23:1232,66,0	0/0:35,0:34:96.32:0,96,2399	1/1:1,20:21:54.19:1008,54,0	1/1:3,17:20:51.17:952,51,0	1/1:1,5:6:6.02:112,6,0	1/1:1,29:30:81.28:1512,81,0	1/1:2,23:25:57.20:1064,57,0	1/1:1,12:13:30.10:560,30,0	1/1:2,21:23:57.20:1064,57,0	1/1:0,25:25:69.24:1288,69,0	1/1:1,29:30:72.25:1343,72,0	1/1:0,8:8:24.08:448,24,0	0/0:21,0:21:57.20:0,57,1482	0/0:26,0:26:69.22:0,69,1766	0/0:34,1:35:90.24:0,90,2296	1/1:4,22:26:42.14:776,42,0	1/1:0,15:15:36.11:643,36,0	1/1:3,19:22:45.15:840,45,0	1/1:2,10:12:21.07:389,21,0	1/1:2,17:19:51.17:952,51,0	1/1:7,26:33:67.47:1214,67,0	1/1:0,3:3:6.02:112,6,0
chr10	17537647	.	TTGTGTGTGTGTGTGTGTGTGTGTG	T	328.30	PASS	AC=6;AF=0.111;AN=54;BaseQRankSum=2.806;DP=436;FS=0.000;HRun=0;HaplotypeScore=223.7163;InbreedingCoeff=0.5817;MQ=63.02;MQ0=15;MQRankSum=0.004;QD=6.84;ReadPosRankSum=-2.018;VQSLOD=2.0048;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:20:15.05:0,15,1533	0/0:13,0:13:17.94:0,18,1556	0/0:19,0:15:3.01:0,3,184	0/0:21,0:18:18.13:0,18,354	0/0:13,0:13:6.49:0,6,398	0/0:19,0:19:21.07:0,21,1165	0/0:20,0:19:24.08:0,24,1369	1/1:16,8:23:23.89:208,24,0	0/0:14,0:14:24.05:0,24,2092	0/0:21,0:19:39.13:0,39,3088	0/0:13,0:13:6.02:0,6,525	0/0:14,0:12:15.05:0,15,1114	0/0:17,0:16:17.56:0,18,1096	0/0:12,0:12:2.81:0,3,292	0/0:16,0:15:15.05:0,15,963	0/0:8,0:8:17.99:0,18,1201	0/0:24,0:23:33.11:0,33,2921	0/0:17,0:16:27.09:0,27,2332	1/1:8,1:8:3.01:188,3,0	./.	1/1:15,0:15:3.01:50,3,0	0/0:10,0:8:3.01:0,3,75	0/0:11,0:10:3.01:0,3,307	0/0:16,0:16:15.03:0,15,876	0/0:17,0:17:30.09:0,30,2553	0/0:19,0:18:30.10:0,30,2146	0/0:20,0:20:21.43:0,21,1369	0/0:5,0:5:15.01:0,15,1194
chr10	17537690	.	T	TGAGAGAGAGA	381.04	PASS	AB=1.000;AC=8;AF=0.160;AN=50;BaseQRankSum=2.778;DP=353;FS=1.117;HRun=0;HaplotypeScore=134.3380;InbreedingCoeff=0.1484;MQ=43.16;MQ0=22;MQRankSum=-3.393;QD=4.10;ReadPosRankSum=-3.873;VQSLOD=1.4677;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:19,0:15:99:99,0,327	0/0:12,0:12:18.40:0,18,394	./.	./.	0/0:13,0:13:18.53:0,19,546	0/0:22,0:21:6.02:0,6,88	0/0:15,0:14:15.01:0,15,368	0/1:18,0:18:99:100,0,396	0/0:17,0:17:24.08:0,24,385	0/0:15,0:13:39.13:0,39,833	0/0:14,0:14:12.03:0,12,321	0/0:10,0:6:6.90:0,7,146	0/0:7,5:11:9.03:0,9,202	0/0:11,0:11:5.38:0,5,84	0/1:14,0:13:1.56:2,0,88	0/0:8,0:8:21.07:0,21,632	0/0:19,0:16:35.87:0,36,862	0/0:14,0:13:32.73:0,33,762	0/1:6,0:4:1.43:214,0,1	./.	0/1:7,0:7:0:0,0,0	1/1:12,0:9:2.95:38,3,0	0/0:13,0:12:3.90:0,4,87	0/1:17,0:16:42.44:42,0,184	0/0:14,0:14:33.10:0,33,854	0/0:15,0:14:37.38:0,37,756	0/0:16,0:15:29.31:0,29,553	0/0:6,0:6:0.53:0,1,116
chr10	17537694	.	TGAGAGA	T	1758.21	PASS	AB=0.955;AC=25;AF=0.481;AN=52;BaseQRankSum=-3.593;DP=375;FS=39.091;HRun=0;HaplotypeScore=98.3698;InbreedingCoeff=0.2762;MQ=43.28;MQ0=20;MQRankSum=3.831;QD=8.41;ReadPosRankSum=0.646;VQSLOD=0.1808;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:17:8.68:0,9,203	0/1:12,0:12:32.63:33,0,50	1/1:1,0:1:2.22:7,2,0	0/0:7,0:1:3.01:0,3,74	1/1:12,0:12:18.23:163,18,0	1/1:7,14:21:3.01:40,3,0	1/1:16,0:15:12.04:239,12,0	0/0:22,0:22:35.86:0,36,665	0/0:19,0:19:21.07:0,21,523	0/1:15,0:14:11.73:71,0,12	1/1:13,0:13:8.95:97,9,0	./.	0/0:12,0:11:6:0,6,65	0/0:12,0:12:4.31:0,4,23	1/1:6,0:12:2.69:50,3,0	0/1:8,0:8:7.51:199,0,8	0/1:20,0:17:99:122,0,134	0/1:14,0:14:34.13:191,0,34	0/0:8,0:6:17.27:0,17,316	1/1:11,0:9:0.47:1,0,0	0/0:10,0:10:3.01:0,3,75	0/0:13,0:10:9.03:0,9,206	./.	0/0:18,0:17:15.05:0,15,336	1/1:15,0:15:24.08:458,24,0	0/1:15,0:14:2.33:146,0,2	1/1:16,0:15:13.96:92,14,0	0/1:4,0:6:14.96:15,0,34
chr10	17537859	.	CT	C	5973.19	PASS	AB=1.000;AC=25;AF=0.446;AN=56;BaseQRankSum=13.533;DP=509;FS=0.723;HRun=10;HaplotypeScore=58.9820;InbreedingCoeff=0.9202;MQ=70.61;MQ0=0;MQRankSum=1.306;QD=22.04;ReadPosRankSum=-0.968;VQSLOD=5.3566;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,1:25:40.10:0,40,660	1/1:0,11:11:29.99:260,30,0	0/1:10,0:10:2.99:3,0,95	0/0:8,0:7:6.05:0,6,70	1/1:1,22:23:65.62:535,66,0	0/0:22,0:22:57.15:0,57,630	0/0:16,0:16:42.10:0,42,457	1/1:4,32:36:95.92:826,96,0	0/0:16,1:17:10.05:0,10,339	1/1:0,31:31:92.93:797,93,0	1/1:3,17:20:50.74:416,51,0	0/0:11,0:11:27.92:0,28,287	0/0:11,0:10:30.04:0,30,312	0/0:14,0:14:16.68:0,17,376	0/0:15,1:16:18.99:0,19,417	0/0:8,0:8:18.04:0,18,192	1/1:1,23:24:59.98:521,60,0	0/0:15,0:15:39.11:0,39,431	1/1:3,18:21:53.95:465,54,0	1/1:3,31:34:92.92:800,93,0	1/1:0,7:7:21:182,21,0	0/0:14,0:14:36.10:0,36,398	0/0:24,0:24:63.17:0,63,696	0/0:11,1:12:10.04:0,10,339	0/0:25,0:25:66.18:0,66,727	1/1:3,17:20:50.98:440,51,0	1/1:2,14:17:40.97:337,41,0	1/1:0,16:16:44.99:390,45,0
chr10	17541800	.	C	CA	23285.33	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-7.408;DP=638;FS=3.104;HRun=2;HaplotypeScore=63.5984;InbreedingCoeff=0.9995;MQ=85.94;MQ0=0;MQRankSum=-10.252;QD=39.07;ReadPosRankSum=6.036;VQSLOD=4.9865;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:1,39:40:99:1597,111,0	1/1:1,12:13:33.07:475,33,0	0/0:24,0:25:51.66:0,52,733	0/0:17,0:17:37.15:0,37,507	1/1:0,24:24:72.24:1036,72,0	1/1:2,22:24:60.20:864,60,0	1/1:0,20:20:51.17:734,51,0	1/1:3,30:33:90.27:1242,90,0	1/1:0,17:17:48.16:690,48,0	1/1:1,26:27:75.24:1063,75,0	1/1:2,20:22:57.15:797,57,0	1/1:1,20:21:54.18:775,54,0	1/1:1,24:25:69.23:985,69,0	1/1:0,22:22:63.21:904,63,0	1/1:3,28:31:75.25:1080,75,0	1/1:0,28:28:81.27:1166,81,0	1/1:1,24:25:66.22:950,66,0	1/1:1,11:12:33.11:475,33,0	1/1:3,20:23:60.18:845,60,0	1/1:0,18:18:54.18:777,54,0	1/1:0,15:15:42.14:604,42,0	1/1:0,18:18:54.18:777,54,0	1/1:0,17:17:51.17:734,51,0	1/1:0,18:18:51.17:734,51,0	1/1:1,34:35:90.30:1295,90,0	1/1:1,32:33:96.31:1362,96,0	1/1:2,21:23:60.20:850,60,0	1/1:0,12:12:33.11:475,33,0
chr10	17541948	.	AGTGTGTGCATGCATGCCTGCGTGCGTACACGCAT	A	9759.05	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=9.394;DP=714;FS=2.141;HRun=0;HaplotypeScore=567.1922;InbreedingCoeff=0.9304;MQ=68.88;MQ0=0;MQRankSum=-10.448;QD=63.37;ReadPosRankSum=4.548;VQSLOD=0.7824;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:26,6:32:6.02:459,6,0	0/0:12,0:12:33.11:0,33,3862	0/0:13,0:11:12.04:0,12,632	0/0:12,0:12:17.25:0,17,474	0/0:17,0:17:48.16:0,48,5349	0/0:20,0:20:45.15:0,45,5183	0/0:46,0:46:99:0,123,14669	0/0:33,0:33:69.21:0,69,4394	0/0:26,0:26:72.25:0,72,7423	0/0:35,0:35:87.28:0,87,9360	0/0:21,0:21:51.18:0,51,6829	1/1:17,15:32:30.10:2603,30,0	1/1:13,13:26:30.10:2603,30,0	1/1:13,11:24:24.08:2082,24,0	0/0:30,0:30:78.27:0,78,9959	0/0:27,0:27:78.27:0,78,9582	0/0:29,0:29:72.25:0,72,8464	0/0:18,0:18:42.14:0,42,5765	0/0:29,0:29:51.18:0,51,3067	0/0:32,0:32:78.27:0,78,10594	0/0:63,0:63:99:0,154,18034	1/1:11,4:15:9.03:781,9,0	1/1:9,4:13:9.92:783,10,0	1/1:9,3:12:6.91:448,7,0	0/0:26,0:26:69.24:0,69,7388	0/0:41,0:41:99:0,99,10941	0/0:21,0:21:54.19:0,54,6561	0/0:8,0:8:12.04:0,12,1813
chr10	17543738	.	A	AAG	8278.65	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-15.977;DP=591;FS=2.886;HRun=0;HaplotypeScore=74.7919;InbreedingCoeff=0.9983;MQ=81.22;MQ0=0;MQRankSum=-1.273;QD=46.25;ReadPosRankSum=1.536;VQSLOD=6.3631;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:57.18:0,57,842	1/1:0,15:15:42.14:740,42,0	0/0:27,0:27:65.84:0,66,906	0/0:8,0:8:18.03:0,18,248	1/1:0,25:25:75.26:1306,75,0	0/0:33,0:33:99:0,99,1429	0/0:11,0:11:33.10:0,33,481	0/0:24,0:24:69.22:0,69,1007	0/0:24,0:24:72.24:0,72,1069	1/1:0,24:24:72.14:1211,72,0	1/1:0,19:19:57.11:951,57,0	0/0:19,0:19:57.19:0,57,861	0/0:16,0:16:48.14:0,48,670	0/0:15,0:15:39.12:0,39,571	0/0:20,0:20:57.18:0,57,826	0/0:22,0:22:63.19:0,63,895	1/1:1,27:28:72.24:1269,72,0	0/0:16,0:16:48.16:0,48,726	0/0:31,0:31:93.25:0,93,1281	0/0:29,0:29:84.27:0,84,1248	0/0:9,0:9:27.09:0,27,408	0/0:20,0:20:60.20:0,60,890	0/0:28,0:28:84.24:0,84,1205	0/0:17,0:17:50.52:0,51,710	0/0:24,0:24:72.23:0,72,1054	1/1:3,25:28:75.23:1269,75,0	1/1:3,22:25:57.18:1003,57,0	1/1:0,14:14:30.10:529,30,0
chr10	17545178	.	CAG	C	378.27	PASS	AB=0.951;AC=15;AF=0.268;AN=56;BaseQRankSum=2.210;DP=529;FS=18.481;HRun=0;HaplotypeScore=158.9369;InbreedingCoeff=-0.2163;MQ=46.30;MQ0=27;MQRankSum=-4.969;QD=1.49;ReadPosRankSum=-5.348;VQSLOD=-0.4823;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:32:42.72:0,43,434	1/1:4,0:4:1.55:4,2,0	0/1:23,0:8:6.12:6,0,127	0/1:25,0:13:24.04:24,0,163	0/0:25,2:26:41.77:0,42,381	0/0:22,0:19:6.93:0,7,155	0/0:16,0:15:37.32:0,37,277	0/0:11,0:11:28.17:0,28,196	0/1:13,0:13:1.86:2,0,156	0/0:25,2:27:26.61:0,27,562	0/1:15,4:18:3.24:3,0,212	0/1:14,1:15:3.88:4,0,119	0/1:20,0:19:15.67:16,0,192	0/0:18,0:17:7.58:0,8,205	0/1:17,0:16:1.05:1,0,173	0/0:12,0:11:14.36:0,14,109	0/0:31,0:30:41.28:0,41,387	0/0:11,0:9:8.24:0,8,59	0/1:12,0:11:31.48:31,0,88	0/0:11,0:10:2.66:0,3,64	0/1:24,0:22:20.58:21,0,205	0/0:12,0:12:23.62:0,24,165	0/0:15,0:14:16.77:0,17,188	0/0:26,1:26:10.05:0,10,275	0/1:19,0:18:3.82:4,0,149	0/1:25,3:26:96.12:96,0,378	0/1:19,2:19:99:144,0,153	0/1:10,4:13:99:157,0,146
chr10	17545186	.	C	CACAG	3999.51	PASS	AB=1.000;AC=36;AF=0.643;AN=56;BaseQRankSum=-2.086;DP=506;FS=1.025;HRun=0;HaplotypeScore=164.8920;InbreedingCoeff=0.2499;MQ=44.11;MQ0=32;MQRankSum=4.929;QD=9.85;ReadPosRankSum=2.979;VQSLOD=3.0132;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:30:5.60:297,0,6	1/1:2,0:2:1.55:4,2,0	0/0:15,0:5:14.96:0,15,125	0/0:19,0:8:14.94:0,15,121	1/1:28,0:27:29.72:229,30,0	1/1:21,1:19:25.75:266,26,0	1/1:16,0:15:2.40:229,2,0	0/0:8,0:8:23.67:0,24,166	0/1:13,0:13:59.01:122,0,59	1/1:22,0:22:10.49:383,10,0	1/1:16,0:15:1.04:151,1,0	0/1:12,0:12:26.06:48,0,26	0/1:20,0:19:11.27:162,0,11	1/1:20,0:19:6.77:169,7,0	1/1:13,3:15:20.88:219,21,0	1/1:8,5:11:17.63:250,18,0	1/1:31,0:30:30.51:336,31,0	1/1:10,0:8:5.92:40,6,0	0/0:19,0:18:13.38:0,13,217	0/0:14,0:12:10.49:0,10,89	0/0:25,0:22:13.29:0,13,181	1/1:16,0:15:20.40:197,20,0	1/1:14,0:12:19.64:160,20,0	0/1:27,0:26:23.57:207,0,24	1/1:19,0:18:1.73:104,2,0	0/1:26,0:24:28.49:268,0,28	0/1:19,0:17:64.43:64,0,66	0/1:11,0:10:47.59:95,0,48
chr10	17545188	.	C	CAG	3845.68	PASS	AB=0.988;AC=34;AF=0.607;AN=56;BaseQRankSum=-0.484;DP=501;FS=4.307;HRun=0;HaplotypeScore=150.3119;InbreedingCoeff=0.3539;MQ=43.88;MQ0=32;MQRankSum=6.019;QD=9.86;ReadPosRankSum=4.295;VQSLOD=3.3080;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:32,1:30:25.70:340,26,0	1/1:2,0:2:0.89:2,1,0	0/0:15,0:5:14.96:0,15,125	0/0:19,0:8:14.94:0,15,121	1/1:28,0:27:29.72:229,30,0	0/1:20,1:18:6.41:163,0,6	0/1:16,0:15:10.72:177,0,11	0/0:10,0:10:23.78:0,24,174	0/1:13,0:13:60.17:121,0,60	1/1:20,0:20:20.32:372,20,0	1/1:16,0:15:12.26:162,12,0	1/1:12,0:12:4.29:92,4,0	1/1:21,0:20:18.41:248,18,0	1/1:19,0:18:9.76:204,10,0	1/1:13,1:13:19.92:166,20,0	1/1:13,0:11:17.93:168,18,0	1/1:32,0:31:35.88:317,36,0	0/0:5,4:8:5.63:0,6,30	0/0:18,0:18:23.98:0,24,244	0/0:14,0:12:14.92:0,15,117	0/0:25,0:22:28.94:0,29,225	1/1:16,0:15:23.66:208,24,0	1/1:14,0:12:26.52:191,27,0	0/1:27,0:26:7.56:232,0,8	0/1:18,1:18:30.10:80,0,30	0/1:25,0:23:40.69:264,0,41	0/1:18,0:16:58.64:59,0,72	0/1:11,0:10:39.48:51,0,39
chr10	17545230	.	CACAA	C	551.42	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-0.934;DP=453;FS=2.158;HRun=0;HaplotypeScore=180.0574;InbreedingCoeff=0.8723;MQ=40.57;MQ0=20;MQRankSum=2.676;QD=4.92;ReadPosRankSum=4.683;VQSLOD=2.6729;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:31,0:28:5.78:29,6,0	0/0:3,0:3:1.55:0,2,18	0/0:18,0:9:22.70:0,23,209	0/0:13,0:6:12.69:0,13,150	0/0:27,0:26:33.82:0,34,216	0/0:22,0:21:27.32:0,27,215	0/0:13,0:12:23.14:0,23,161	0/0:21,0:21:53.22:0,53,416	0/0:7,0:7:12.42:0,12,156	0/0:13,0:13:35.03:0,35,266	0/0:18,0:17:34.55:0,35,261	1/1:12,1:13:22.85:145,23,0	1/1:18,1:17:30.44:209,30,0	1/1:14,0:13:28.29:154,28,0	0/0:11,0:11:20.02:0,20,140	0/0:10,0:9:8.48:0,8,99	0/0:29,0:28:39.57:0,40,298	0/0:6,0:5:11.98:0,12,130	0/0:29,0:28:40.53:0,41,520	0/0:17,0:16:36.29:0,36,249	0/0:15,0:13:10.24:0,10,181	1/1:14,0:12:10.21:60,10,0	1/1:7,1:7:5.75:29,6,0	1/1:11,2:13:16.35:109,16,0	0/0:16,0:16:22.38:0,22,159	0/0:24,0:23:56.72:0,57,465	0/0:15,0:15:35.77:0,36,298	0/0:12,0:11:19.57:0,20,215
chr10	17545232	.	CAA	C	1305.24	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-1.140;DP=457;FS=0.000;HRun=3;HaplotypeScore=171.5927;InbreedingCoeff=0.8741;MQ=40.71;MQ0=16;MQRankSum=2.534;QD=11.87;ReadPosRankSum=5.615;VQSLOD=0.2429;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:29,2:28:11.82:148,12,0	0/0:5,0:5:6.51:0,7,56	0/0:20,0:9:22.48:0,22,208	0/0:14,0:7:15.70:0,16,179	0/0:25,0:24:33.82:0,34,216	0/0:21,0:21:3.34:0,3,122	0/0:13,0:12:25.80:0,26,158	0/0:22,0:22:58.29:0,58,404	0/0:7,0:7:12.09:0,12,142	0/0:14,0:14:29.39:0,29,224	0/0:18,0:17:37.43:0,37,256	1/1:8,5:13:20.53:239,21,0	1/1:14,5:17:17.53:355,18,0	1/1:8,5:12:29.78:318,30,0	0/0:12,0:12:23.80:0,24,151	0/0:10,0:9:20.53:0,21,143	0/0:29,1:29:10.27:0,10,279	0/0:5,0:5:11.98:0,12,135	0/0:31,0:30:61.37:0,61,598	0/0:15,0:14:29.72:0,30,229	0/0:14,0:13:26.39:0,26,195	1/1:10,4:13:11.65:150,12,0	1/1:5,3:7:6.02:91,6,0	1/1:8,4:12:17.16:192,17,0	0/0:18,0:18:26.68:0,27,182	0/0:25,0:24:34.08:0,34,341	0/0:16,0:15:19.41:0,19,204	0/0:12,0:11:5.53:0,6,78
chr10	17545259	.	T	TTTTTTTCC	29971.86	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-2.457;DP=418;FS=2.925;HRun=0;HaplotypeScore=144.6150;InbreedingCoeff=0.8122;MQ=53.71;MQ0=2;MQRankSum=-2.474;QD=76.85;ReadPosRankSum=0.827;VQSLOD=5.1815;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,12:28:42.14:1633,42,0	1/1:3,2:5:12.04:406,12,0	0/0:19,0:14:19.51:0,20,318	0/0:9,0:8:9.01:0,9,96	1/1:11,14:27:72.18:2104,72,0	1/1:4,5:10:24.08:889,24,0	1/1:4,6:11:27.09:952,27,0	1/1:17,4:22:63.21:2044,63,0	1/1:2,2:5:6.02:223,6,0	1/1:7,6:15:42.14:1516,42,0	1/1:8,8:18:39.13:1174,39,0	1/1:5,9:15:33.11:1227,33,0	1/1:6,10:17:45.09:1781,45,0	1/1:10,3:17:36.09:1169,36,0	1/1:3,7:13:21.07:804,21,0	1/1:1,3:5:12.04:408,12,0	1/1:6,9:19:36.12:1333,36,0	1/1:3,0:3:6.02:161,6,0	1/1:18,8:28:54.18:1774,54,0	1/1:7,7:16:39.12:1412,39,0	1/1:6,2:10:9.03:291,9,0	1/1:8,8:19:45.15:1527,45,0	1/1:9,4:13:30.09:1087,30,0	1/1:5,5:11:24.08:850,24,0	1/1:3,12:15:42.14:1659,42,0	1/1:10,12:26:57.18:1993,57,0	1/1:5,4:10:24.07:921,24,0	1/1:6,2:9:21.04:632,21,0
chr10	17545428	.	TA	T	1815.88	PASS	AB=0.796;AC=16;AF=0.286;AN=56;BaseQRankSum=-0.527;DP=461;FS=0.441;HRun=12;HaplotypeScore=75.1249;InbreedingCoeff=0.6185;MQ=75.41;MQ0=2;MQRankSum=0.548;QD=12.35;ReadPosRankSum=2.794;VQSLOD=3.7757;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,1:21:21.81:0,22,381	0/1:6,1:7:5.13:5,0,128	0/0:11,0:13:19.68:0,20,160	0/0:11,0:11:8.36:0,8,57	0/0:23,1:24:19.32:0,19,373	1/1:2,13:15:35.85:279,36,0	0/1:4,7:11:9.55:118,0,10	0/0:21,0:21:48.08:0,48,478	1/1:3,8:11:16.96:122,17,0	0/0:23,0:22:30.01:0,30,293	0/0:11,0:11:27.05:0,27,274	0/0:26,1:27:63.10:0,63,627	0/0:11,0:11:27.05:0,27,274	0/0:15,0:16:38.91:0,39,379	1/1:3,13:16:34.98:277,35,0	1/1:1,16:17:47.81:371,48,0	0/0:32,4:38:16.65:0,17,502	1/1:3,22:25:38.29:480,38,0	0/1:10,2:12:28.70:29,0,86	0/0:10,0:10:21.03:0,21,207	0/0:7,0:7:12.02:0,12,122	0/0:10,0:11:0.14:0,0,135	0/1:12,2:16:23.48:23,0,151	0/0:20,4:24:24.84:0,25,426	1/1:4,13:17:38.83:302,39,0	0/0:22,1:23:15.88:0,16,341	0/0:12,0:13:29.89:0,30,288	0/0:8,0:8:21:0,21,199
chr10	17546996	.	A	AT	10624.43	PASS	AB=0.594;AC=50;AF=0.893;AN=56;BaseQRankSum=-7.129;DP=573;FS=38.253;HRun=11;HaplotypeScore=60.7133;InbreedingCoeff=0.5908;MQ=80.89;MQ0=0;MQRankSum=-3.240;QD=20.08;ReadPosRankSum=1.704;VQSLOD=3.3907;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,31:34:50.94:501,51,0	1/1:2,10:12:30.06:304,30,0	0/0:25,0:24:6.41:0,6,116	0/0:17,1:16:28.85:0,29,209	1/1:8,21:29:53.99:517,54,0	1/1:3,14:17:39.08:396,39,0	1/1:3,19:23:36.72:539,37,0	1/1:4,22:27:57.10:571,57,0	1/1:4,16:20:24.86:432,25,0	1/1:7,14:21:18.88:356,19,0	1/1:4,19:25:59.62:533,60,0	1/1:4,12:17:29.89:288,30,0	1/1:0,11:12:29.89:288,30,0	0/1:3,5:9:5.20:134,0,5	1/1:3,14:17:21.86:403,22,0	1/1:0,13:15:35.74:333,36,0	1/1:2,28:31:51.91:695,52,0	1/1:3,18:21:10.63:465,11,0	1/1:3,14:17:36.07:365,36,0	1/1:5,11:17:39.69:352,40,0	1/1:2,18:20:38.98:367,39,0	1/1:5,15:21:15.63:291,16,0	1/1:3,9:12:5.93:87,6,0	1/1:1,33:34:90.18:914,90,0	1/1:0,19:19:33.07:335,33,0	1/1:6,21:27:16.59:507,17,0	1/1:2,20:22:16.64:527,17,0	0/1:3,7:10:5.25:123,0,5
chr10	17547108	.	AC	A	4511.26	PASS	AB=0.968;AC=21;AF=0.375;AN=56;BaseQRankSum=-0.081;DP=710;FS=0.334;HRun=4;HaplotypeScore=99.8337;InbreedingCoeff=0.3140;MQ=79.59;MQ0=2;MQRankSum=-1.568;QD=12.85;ReadPosRankSum=-0.757;VQSLOD=3.0218;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:48,1:49:99:0,111,1740	0/1:15,1:16:23.50:110,0,24	0/0:42,0:27:22:0,22,395	0/0:32,0:25:15.76:0,16,312	0/1:38,1:39:68.24:68,0,131	1/1:0,32:32:81.25:967,81,0	1/1:7,24:31:76.42:933,76,0	0/0:25,0:25:72.17:0,72,860	0/1:16,0:16:21.62:37,0,22	0/1:26,2:28:12.39:142,0,12	0/1:20,0:20:35.67:36,0,56	0/0:28,0:28:75.15:0,75,895	0/0:22,0:22:57.02:0,57,691	0/0:24,0:24:64.42:0,64,882	1/1:1,20:21:42.13:501,42,0	1/1:3,20:23:53.90:655,54,0	0/1:36,1:37:14.49:14,0,129	1/1:5,15:20:8.45:460,8,0	0/0:16,0:16:42.08:0,42,490	0/0:37,0:37:99:0,105,1333	0/0:22,1:23:36.33:0,36,728	0/0:19,0:19:47.32:0,47,609	0/0:17,0:17:45.57:0,46,548	0/0:23,0:23:63.47:0,63,784	1/1:0,15:15:33.10:394,33,0	0/1:21,0:21:22.98:146,0,23	0/1:24,0:24:15.74:16,0,87	0/1:7,1:8:14.84:34,0,15
chr10	17549699	.	AG	A	5988.03	PASS	AB=0.731;AC=51;AF=0.911;AN=56;BaseQRankSum=-2.534;DP=549;FS=0.000;HRun=11;HaplotypeScore=74.2651;InbreedingCoeff=0.2555;MQ=75.96;MQ0=0;MQRankSum=-2.611;QD=11.26;ReadPosRankSum=4.328;VQSLOD=4.4207;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,1:30:45.31:145,45,0	1/1:4,2:6:14.94:117,15,0	0/1:17,1:15:5.16:5,0,84	0/0:16,0:13:0.82:0,1,117	1/1:9,8:18:31.89:243,32,0	1/1:7,13:21:29.08:247,29,0	1/1:10,20:31:58.96:474,59,0	1/1:9,11:20:26.90:217,27,0	1/1:3,13:16:35.96:295,36,0	1/1:13,10:24:38.46:302,38,0	1/1:6,5:12:24.75:175,25,0	1/1:2,0:20:30.55:88,31,0	1/1:2,0:21:36.44:105,36,0	1/1:5,0:23:36.85:107,37,0	1/1:9,10:19:38.92:319,39,0	1/1:8,10:18:38.94:320,39,0	1/1:5,25:30:68.89:565,69,0	1/1:3,17:20:47.94:393,48,0	1/1:13,4:18:28.57:209,29,0	1/1:6,4:10:14.95:121,15,0	0/1:8,9:17:20.67:122,0,21	1/1:5,0:19:24:69,24,0	0/1:5,0:16:14.92:29,0,15	1/1:2,0:21:32.59:94,33,0	1/1:9,8:17:23.97:197,24,0	1/1:8,17:25:50.75:396,51,0	1/1:9,23:32:65.85:533,66,0	1/1:2,8:10:11.97:98,12,0
chr10	17549709	.	GGT	G	841.08	PASS	AB=0.965;AC=12;AF=0.214;AN=56;BaseQRankSum=6.262;DP=544;FS=4.171;HRun=0;HaplotypeScore=103.3736;InbreedingCoeff=0.5024;MQ=75.09;MQ0=0;MQRankSum=-2.140;QD=5.29;ReadPosRankSum=7.442;VQSLOD=2.1196;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:27,2:29:68.24:158,0,68	0/0:7,0:7:5.70:0,6,61	0/0:16,0:13:8.94:0,9,293	0/0:21,1:18:5.48:0,5,449	0/0:12,0:12:24.11:0,24,160	0/0:24,0:24:38.32:0,38,282	0/0:26,0:26:61.92:0,62,381	0/0:22,0:22:50.20:0,50,362	0/0:17,0:17:38.06:0,38,205	0/0:23,0:23:51.23:0,51,351	0/1:11,1:12:23.77:24,0,89	1/1:20,0:20:5.53:107,6,0	0/1:25,0:25:67.72:148,0,68	1/1:18,2:20:43.84:190,44,0	0/0:24,0:24:49.97:0,50,315	0/0:16,0:16:45.09:0,45,274	0/0:32,0:32:67.71:0,68,404	0/0:20,0:20:46.89:0,47,281	0/0:14,0:14:28.97:0,29,234	0/0:13,0:13:32.24:0,32,240	0/0:19,0:19:26.36:0,26,207	1/1:15,2:17:30.10:161,30,0	0/1:15,0:15:16.97:94,0,17	1/1:20,1:21:16.12:126,16,0	0/0:15,0:14:34.48:0,34,201	0/0:20,0:20:53.85:0,54,321	0/0:31,0:31:56.82:0,57,388	0/0:12,0:12:19.26:0,19,139
chr10	17550408	.	AACACAC	A	220.01	PASS	AB=1.000;AC=3;AF=0.056;AN=54;BaseQRankSum=2.594;DP=487;FS=0.000;HRun=0;HaplotypeScore=134.0685;InbreedingCoeff=0.4135;MQ=69.25;MQ0=6;MQRankSum=-1.284;QD=8.15;ReadPosRankSum=1.045;VQSLOD=2.4690;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:18:3.01:0,3,59	0/0:5,0:5:3.01:0,3,77	0/0:20,0:17:5.98:0,6,87	0/0:32,0:22:6:0,6,67	0/0:12,0:11:6.02:0,6,152	0/0:22,0:20:9.03:0,9,246	0/0:32,0:29:18.38:0,18,320	0/0:26,0:26:33.06:0,33,809	1/1:5,7:12:15.05:307,15,0	0/0:18,0:15:23.47:0,23,439	0/0:8,0:8:0.47:0,0,1	0/0:19,0:19:12.04:0,12,313	0/0:13,0:13:9.03:0,9,175	0/0:9,0:9:9.01:0,9,160	0/0:23,0:23:6.02:0,6,167	0/0:12,0:13:9:0,9,191	0/0:20,0:18:17.98:0,18,327	0/0:14,0:14:17.99:0,18,432	0/0:16,0:15:18.95:0,19,501	0/0:18,0:19:30.10:0,30,883	0/0:20,0:23:31.43:0,31,949	./.	0/1:15,0:15:0:0,0,0	0/0:20,0:20:9.03:0,9,156	0/0:16,0:16:6.02:0,6,169	0/0:24,0:23:43.03:0,43,1061	0/0:26,0:26:27.56:0,28,631	0/0:2,0:2:3.01:0,3,75
chr10	17550441	.	A	ACG	105.15	PASS	AB=0.927;AC=9;AF=0.167;AN=54;BaseQRankSum=6.379;DP=572;FS=2.992;HRun=0;HaplotypeScore=121.7004;InbreedingCoeff=0.3597;MQ=57.61;MQ0=16;MQRankSum=-3.007;QD=0.99;ReadPosRankSum=3.105;VQSLOD=1.6823;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:16:11.26:74,11,0	0/1:4,0:4:5.83:6,0,37	0/0:22,0:17:50.90:0,51,463	0/0:22,0:14:28.34:0,28,341	0/0:20,0:19:29.86:0,30,237	0/0:25,0:23:20.65:0,21,167	0/0:38,0:35:55.31:0,55,427	0/0:31,0:30:84.88:0,85,814	0/0:18,0:18:41.75:0,42,316	0/0:24,0:20:52.85:0,53,417	0/0:8,0:8:2.64:0,3,20	1/1:23,1:24:5.11:72,5,0	0/1:15,0:15:20.68:29,0,21	0/1:17,0:16:15.38:19,0,15	0/0:29,0:29:34.51:0,35,286	0/0:17,0:15:21.88:0,22,214	0/0:23,0:21:45.90:0,46,333	0/0:16,0:16:43.75:0,44,326	0/0:30,0:27:75.05:0,75,723	0/0:22,0:22:51:0,51,578	0/0:36,0:36:92.69:0,93,918	./.	0/1:6,7:13:0:0,0,0	0/1:16,0:16:15.07:38,0,15	0/0:19,0:18:12.01:0,12,170	0/0:24,0:22:58.22:0,58,421	0/0:26,0:26:20.21:0,20,266	0/0:8,0:8:23.88:0,24,184
chr10	17550445	.	A	ACACACACGCACC	6838.75	PASS	AB=1.000;AC=33;AF=0.611;AN=54;BaseQRankSum=8.765;DP=574;FS=31.872;HRun=0;HaplotypeScore=212.8339;InbreedingCoeff=0.3539;MQ=62.82;MQ0=15;MQRankSum=-8.611;QD=17.58;ReadPosRankSum=0.550;VQSLOD=2.7136;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:17:29.85:651,30,0	1/1:5,0:5:5.14:69,5,0	0/0:21,0:17:44.92:0,45,803	0/0:22,0:15:32.60:0,33,597	1/1:20,0:19:4.68:36,5,0	0/1:28,0:26:99:400,0,359	0/1:35,0:32:99:274,0,614	0/0:31,0:30:27.54:0,28,1356	0/0:16,0:16:42.14:0,42,896	1/1:23,0:19:3.94:377,4,0	1/1:7,0:7:2.51:7,3,0	1/1:6,15:28:13.27:1052,13,0	1/1:3,0:15:10.87:411,11,0	1/1:2,10:16:6.02:288,6,0	0/1:29,0:29:99:308,0,541	0/1:17,0:15:88.55:89,0,391	1/1:22,0:21:23.40:478,23,0	0/1:16,0:16:99:177,0,492	0/0:29,0:26:71.39:0,71,1336	0/0:23,0:23:57.15:0,57,1369	0/0:35,0:35:87.27:0,87,1868	./.	1/1:14,0:13:6.38:139,6,0	1/1:7,6:18:12:479,12,0	0/1:19,0:18:99:158,0,334	1/1:25,0:23:23.55:657,24,0	1/1:26,0:26:26.88:673,27,0	0/1:8,0:8:6.87:117,0,7
chr10	17551445	.	CCGTA	C	11872.36	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=16.194;DP=725;FS=15.072;HRun=0;HaplotypeScore=121.0737;InbreedingCoeff=0.9998;MQ=91.94;MQ0=0;MQRankSum=-5.283;QD=45.31;ReadPosRankSum=2.659;VQSLOD=4.7530;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:62,0:62:99:0,181,4746	0/0:12,0:12:33.11:0,33,827	0/0:34,0:34:93.32:0,93,2334	0/0:29,0:29:75.25:0,75,1797	0/0:31,0:31:87.26:0,87,2237	1/1:1,23:24:57.20:1063,57,0	1/1:2,19:21:54.19:1004,54,0	1/1:6,34:40:99:1806,102,0	1/1:0,20:20:48.16:895,48,0	0/0:35,0:35:99:0,102,2591	0/0:23,0:23:69.22:0,69,1746	0/0:21,0:21:63.22:0,63,1670	0/0:22,0:22:63.22:0,63,1679	0/0:30,0:30:87.28:0,87,2262	1/1:4,28:32:78.27:1455,78,0	1/1:2,22:24:66.23:1228,66,0	0/0:38,0:38:99:0,111,2813	1/1:0,14:14:42.14:784,42,0	1/1:4,15:19:48.14:855,48,0	1/1:3,17:20:42.06:711,42,0	1/1:1,27:28:63.21:1176,63,0	0/0:23,0:23:66.22:0,66,1673	0/0:18,0:18:51.18:0,51,1341	0/0:17,0:17:48.16:0,48,1263	1/1:1,19:20:48.16:895,48,0	0/0:26,0:26:78.26:0,78,1980	0/0:33,0:33:99:0,99,2585	0/0:9,0:9:27.09:0,27,720
chr10	17552245	.	TTCAAC	T	2787.57	PASS	AB=0.923;AC=17;AF=0.304;AN=56;BaseQRankSum=11.058;DP=531;FS=14.753;HRun=0;HaplotypeScore=102.1834;InbreedingCoeff=0.8579;MQ=69.13;MQ0=0;MQRankSum=-9.393;QD=36.20;ReadPosRankSum=3.834;VQSLOD=2.7025;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:58:99:0,135,4621	1/1:2,4:6:12.04:252,12,0	0/0:27,0:24:60.21:0,60,1757	0/0:23,0:21:48.11:0,48,1236	1/1:0,6:6:9.03:189,9,0	0/0:24,0:24:72.25:0,72,2227	0/0:18,0:18:54.19:0,54,1645	0/0:37,0:37:96.33:0,96,2820	0/0:23,0:23:66.23:0,66,2015	1/1:1,7:8:21.07:441,21,0	1/1:1,6:7:12.04:252,12,0	0/0:23,0:23:69.22:0,69,2063	0/0:18,0:18:54.19:0,54,1657	0/0:25,0:25:72.25:0,72,2209	0/0:26,0:26:75.26:0,75,2316	0/0:20,0:20:54.19:0,54,1666	1/1:3,8:11:21.07:441,21,0	0/1:11,1:12:29.84:30,0,865	0/0:37,0:37:99:0,108,3141	0/0:10,0:10:30.10:0,30,930	0/0:30,0:30:81.28:0,81,2452	0/0:6,0:6:18.06:0,18,558	0/0:4,0:4:12.04:0,12,372	0/0:20,0:20:60.21:0,60,1861	0/0:25,0:25:66.23:0,66,1975	1/1:1,11:12:33.11:690,33,0	1/1:2,11:13:30.10:629,30,0	1/1:0,2:2:3.01:63,3,0
chr10	17552782	.	CTA	C	7833.63	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=9.100;DP=686;FS=13.451;HRun=0;HaplotypeScore=93.5259;InbreedingCoeff=0.9998;MQ=91.23;MQ0=0;MQRankSum=-3.943;QD=39.17;ReadPosRankSum=2.091;VQSLOD=5.7287;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,129,2364	1/1:0,13:13:30.10:430,30,0	0/0:25,0:25:75.21:0,75,1295	0/0:29,0:30:54.81:0,55,1285	1/1:0,34:34:99:1418,99,0	0/0:31,0:31:93.31:0,93,1675	0/0:26,0:26:72.23:0,72,1290	0/0:26,0:26:72.25:0,72,1317	0/0:16,0:16:48.16:0,48,880	1/1:1,23:24:69.21:969,69,0	1/1:1,19:20:48.16:688,48,0	0/0:25,0:25:72.25:0,72,1320	0/0:19,0:19:51.17:0,51,935	0/0:24,0:24:69.24:0,69,1265	0/0:23,0:23:69.24:0,69,1265	0/0:30,0:30:90.31:0,90,1642	1/1:0,45:45:99:1719,120,0	0/0:17,0:17:51.13:0,51,885	0/0:13,0:13:39.13:0,39,711	0/0:25,0:25:72.25:0,72,1318	0/0:34,0:34:99:0,102,1838	0/0:15,0:15:42.14:0,42,770	0/0:13,0:13:36.12:0,36,652	0/0:27,0:27:78.27:0,78,1430	0/0:22,0:22:66.23:0,66,1210	1/1:0,21:21:63.18:867,63,0	1/1:0,33:33:93.31:1332,93,0	1/1:1,9:10:30.09:412,30,0
chr10	17554158	.	GA	G	920.55	PASS	AB=0.856;AC=17;AF=0.304;AN=56;BaseQRankSum=1.024;DP=670;FS=3.959;HRun=15;HaplotypeScore=93.5407;InbreedingCoeff=0.5285;MQ=68.02;MQ0=9;MQRankSum=0.679;QD=4.18;ReadPosRankSum=4.568;VQSLOD=1.6379;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:13,20:37:49.35:292,49,0	0/0:3,0:9:20.35:0,20,117	0/0:57,0:17:16.49:0,16,100	0/0:43,0:20:9.15:0,9,120	0/0:12,0:30:41.55:0,42,312	0/0:33,2:35:23.60:0,24,574	0/0:19,4:25:1.12:0,1,382	0/0:30,1:29:3.96:0,4,236	0/1:15,3:20:15.81:16,0,217	0/0:11,1:23:27.61:0,28,275	0/0:8,0:21:35.04:0,35,212	1/1:7,9:17:16.72:102,17,0	1/1:6,14:21:15.74:89,16,0	0/1:12,3:16:1.37:94,0,1	0/1:21,3:24:28.91:29,0,238	0/0:20,1:20:24.84:0,25,346	0/0:4,0:17:20.60:0,21,115	0/1:11,2:13:5.66:6,0,178	0/1:14,2:16:13.49:13,0,115	0/0:25,1:26:21.80:0,22,368	0/0:34,0:32:47.90:0,48,402	1/1:6,8:15:1.15:119,1,0	1/1:8,11:21:27.15:165,27,0	1/1:6,13:20:28.46:179,28,0	0/0:13,0:13:18.63:0,19,252	0/0:11,0:22:50.04:0,50,350	0/0:12,0:30:34.84:0,35,215	0/0:8,0:10:26.03:0,26,159
chr10	17554719	.	G	GT	6004.40	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-14.782;DP=674;FS=3.514;HRun=3;HaplotypeScore=61.3031;InbreedingCoeff=0.9997;MQ=70.39;MQ0=0;MQRankSum=-0.784;QD=36.84;ReadPosRankSum=3.988;VQSLOD=5.4570;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,102,1209	0/0:9,0:9:27.08:0,27,324	0/0:13,0:13:34.69:0,35,362	0/0:12,0:11:30.08:0,30,349	0/0:27,0:27:66.16:0,66,766	1/1:1,24:25:66.22:924,66,0	1/1:1,18:19:45.15:630,45,0	0/0:37,0:37:96.26:0,96,1116	1/1:0,17:17:48.16:672,48,0	0/0:29,0:29:81.25:0,81,972	0/0:25,0:25:69.17:0,69,802	0/0:25,0:25:69.21:0,69,827	0/0:19,0:19:57.17:0,57,674	0/0:24,0:24:69.19:0,69,805	1/1:3,24:27:66.22:924,66,0	1/1:2,25:27:75.25:1050,75,0	0/0:33,0:33:99:0,99,1161	1/1:1,21:22:56.73:797,57,0	0/0:24,0:23:66.20:0,66,792	0/0:28,0:28:78.24:0,78,935	0/0:24,0:24:63.16:0,63,724	0/0:12,0:12:36.11:0,36,432	0/0:19,0:19:54.17:0,54,647	0/0:30,0:30:81.23:0,81,958	1/1:0,26:26:72.24:1008,72,0	0/0:35,0:35:99:0,99,1163	0/0:30,0:30:84.24:0,84,995	0/0:20,0:20:60.18:0,60,718
chr10	17555056	.	CT	C	3671.05	PASS	AB=0.608;AC=50;AF=0.926;AN=54;BaseQRankSum=0.835;DP=473;FS=1.221;HRun=14;HaplotypeScore=55.8461;InbreedingCoeff=-0.0876;MQ=55.89;MQ0=29;MQRankSum=1.750;QD=7.89;ReadPosRankSum=3.318;VQSLOD=2.5903;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:10,27:38:34.01:290,0,34	1/1:0,4:4:2.96:21,3,0	1/1:26,0:4:4.74:24,5,0	./.	1/1:6,7:13:19.09:128,19,0	1/1:2,0:17:22.96:69,23,0	1/1:6,0:20:27.08:81,27,0	1/1:11,16:28:19.22:263,19,0	1/1:3,7:10:20.83:144,21,0	1/1:3,13:15:4.82:177,5,0	1/1:4,6:10:13.91:88,14,0	1/1:11,3:13:14.81:102,15,0	0/1:4,8:12:2.37:85,0,2	1/1:4,9:13:17.84:123,18,0	1/1:1,0:26:40.57:117,41,0	1/1:1,1:23:31.49:103,31,0	1/1:3,22:25:25.27:268,25,0	1/1:3,0:24:37.44:111,37,0	0/1:14,14:22:7:230,0,7	1/1:3,9:11:19.88:142,20,0	1/1:4,13:16:26.76:185,27,0	1/1:1,3:4:5.93:41,6,0	0/1:4,8:12:4.42:120,0,4	1/1:2,12:13:35.70:247,36,0	1/1:0,1:5:8.77:28,9,0	1/1:4,16:21:37.94:266,38,0	1/1:7,8:14:17.79:123,18,0	1/1:4,4:8:15.97:94,16,0
chr10	17555406	.	TTTCC	T	254.89	PASS	AC=8;AF=0.148;AN=54;BaseQRankSum=0.968;DP=143;FS=0.000;HRun=0;HaplotypeScore=30.8452;InbreedingCoeff=0.6927;MQ=53.70;MQ0=9;MQRankSum=-0.931;QD=14.99;ReadPosRankSum=-2.197;VQSLOD=2.5094;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:8:21.05:0,21,224	0/0:3,0:2:3:0,3,26	0/0:6,0:4:12.04:0,12,248	0/0:8,0:6:15.02:0,15,316	0/0:5,0:5:15.04:0,15,315	0/0:3,0:3:9.03:0,9,196	0/0:10,0:10:27.09:0,27,642	1/1:2,5:6:15.02:178,15,0	0/0:6,0:5:15.05:0,15,360	0/0:8,0:7:21.07:0,21,445	0/0:3,0:3:9.03:0,9,198	0/0:7,0:7:21.04:0,21,228	0/0:8,0:6:18:0,18,181	0/0:2,0:2:6.02:0,6,79	0/0:5,0:4:12.03:0,12,207	0/0:3,0:3:9.03:0,9,199	0/0:5,0:5:15:0,15,297	0/0:11,0:11:23.20:0,23,432	1/1:0,2:2:6.01:73,6,0	1/1:0,3:3:5.97:69,6,0	1/1:1,4:5:5.97:69,6,0	0/0:6,0:6:17.99:0,18,197	0/0:3,0:3:9.02:0,9,99	0/0:5,0:5:14.95:0,15,143	0/0:4,0:4:12.04:0,12,292	0/0:2,0:2:6.02:0,6,147	0/0:4,0:3:9.03:0,9,182	./.
chr10	17556161	.	A	AGT	2886.21	PASS	AB=0.562;AC=6;AF=0.107;AN=56;BaseQRankSum=-10.770;DP=831;FS=9.088;HRun=0;HaplotypeScore=107.2192;InbreedingCoeff=0.6259;MQ=63.80;MQ0=13;MQRankSum=1.854;QD=23.28;ReadPosRankSum=-1.988;VQSLOD=3.7598;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:56:99:0,138,1649	0/0:12,0:12:27.08:0,27,330	0/0:49,0:25:18.63:0,19,258	0/0:45,0:26:20.94:0,21,385	0/0:23,0:23:60.19:0,60,733	0/0:19,0:19:45.10:0,45,533	0/0:29,0:29:63.20:0,63,770	1/1:12,14:27:45.11:675,45,0	0/0:26,0:27:69.05:0,69,820	0/0:22,0:22:48.15:0,48,587	0/0:20,0:22:47.97:0,48,553	0/0:40,0:42:93.11:0,93,1101	0/0:24,0:24:63.18:0,63,756	0/0:30,0:33:74.88:0,75,854	0/0:33,0:35:86.77:0,87,994	0/0:20,0:22:50.82:0,51,577	0/0:29,0:29:69.03:0,69,807	0/0:30,0:31:78.08:0,78,930	1/1:8,8:14:27.08:406,27,0	0/1:5,19:24:19.14:720,0,19	0/1:13,42:56:51.70:1223,0,52	0/0:28,0:28:69.20:0,69,831	0/0:19,0:21:56.71:0,57,622	0/0:50,0:51:99:0,132,1576	0/0:21,0:21:42.12:0,42,502	0/0:26,0:27:63.02:0,63,737	0/0:15,0:15:35.94:0,36,417	0/0:20,0:20:57.18:0,57,696
chr10	17557615	.	AAC	A	1665.85	PASS	AB=0.845;AC=38;AF=0.731;AN=52;BaseQRankSum=3.241;DP=521;FS=9.445;HRun=0;HaplotypeScore=91.9733;InbreedingCoeff=0.1800;MQ=73.22;MQ0=9;MQRankSum=0.590;QD=4.23;ReadPosRankSum=1.952;VQSLOD=1.7847;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:25:5.85:46,6,0	1/1:3,2:5:2.87:32,3,0	./.	./.	1/1:9,2:11:5.85:46,6,0	0/1:16,6:22:53.29:110,0,53	0/1:12,7:21:5.26:142,0,5	0/0:17,0:17:1.25:0,1,3	0/1:10,2:12:20.05:20,0,91	0/1:19,0:19:14.47:25,0,14	1/1:10,0:10:3.01:30,3,0	1/1:10,0:21:28.28:151,28,0	1/1:10,0:11:2.84:14,3,0	1/1:15,0:17:6.92:31,7,0	0/1:15,7:23:8.56:200,0,9	1/1:12,2:15:11.70:92,12,0	1/1:15,6:24:20.55:170,21,0	1/1:11,6:18:23.27:231,23,0	0/0:26,0:25:18.01:0,18,204	0/0:11,0:14:12.01:0,12,121	0/1:32,0:36:13.13:13,0,126	1/1:12,0:14:9.73:43,10,0	0/0:12,0:14:2.50:0,2,9	1/1:25,0:34:25.57:126,26,0	1/1:9,0:11:8.30:43,8,0	1/1:20,2:22:14.54:121,15,0	1/1:8,2:11:9.02:96,9,0	1/1:4,2:5:3.01:32,3,0
chr10	17558001	.	T	TA	3988.97	PASS	AB=0.813;AC=32;AF=0.571;AN=56;BaseQRankSum=-4.615;DP=499;FS=2.473;HRun=12;HaplotypeScore=65.5076;InbreedingCoeff=0.5107;MQ=70.54;MQ0=11;MQRankSum=-0.404;QD=10.55;ReadPosRankSum=1.357;VQSLOD=3.2139;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,27:34:28.04:570,28,0	1/1:0,5:5:15.02:146,15,0	0/1:41,1:20:22.85:23,0,35	0/1:39,0:15:1.30:1,0,36	1/1:6,15:22:11.73:385,12,0	0/0:14,0:13:26.74:0,27,193	0/0:16,0:16:29.01:0,29,199	0/1:23,0:22:4.24:4,0,258	0/0:5,0:17:23.34:0,23,80	1/1:4,8:13:10.94:242,11,0	1/1:5,9:14:17.98:164,18,0	1/1:2,5:8:14.86:131,15,0	1/1:6,11:17:27.04:263,27,0	0/1:3,8:11:3.87:127,0,4	0/0:8,0:10:21.01:0,21,127	0/0:12,0:13:34.82:0,35,244	1/1:5,23:27:41.19:562,41,0	0/0:23,0:23:50.62:0,51,368	0/1:24,2:25:7.70:8,0,277	0/1:10,2:12:8.34:8,0,110	0/0:13,0:14:31.69:0,32,216	1/1:2,2:5:8.85:73,9,0	1/1:0,9:9:21.03:204,21,0	1/1:2,12:14:30.05:292,30,0	0/0:13,0:13:32.72:0,33,235	0/1:7,17:24:8.58:404,0,9	0/1:7,15:22:4.82:252,0,5	1/1:2,5:8:14.86:131,15,0
chr10	17558111	.	AT	A	3551.99	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=0.920;DP=498;FS=1.293;HRun=11;HaplotypeScore=57.4267;InbreedingCoeff=0.9173;MQ=63.95;MQ0=14;MQRankSum=0.446;QD=14.99;ReadPosRankSum=4.200;VQSLOD=4.2063;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,32:36:4.01:471,4,0	0/0:8,0:7:12.03:0,12,128	0/0:15,0:10:17.65:0,18,148	0/1:13,0:10:0.16:0,0,111	0/0:21,0:21:51.11:0,51,532	1/1:1,15:16:32.95:271,33,0	1/1:6,9:13:20.97:172,21,0	0/0:12,0:30:54.65:0,55,286	1/1:4,12:15:26.94:222,27,0	0/0:22,0:22:48.11:0,48,501	0/0:20,1:22:17.29:0,17,373	1/1:2,3:5:5.99:49,6,0	1/1:3,10:13:26.96:222,27,0	1/1:2,11:13:23.90:189,24,0	1/1:4,11:15:26.96:222,27,0	1/1:4,7:11:17.93:148,18,0	0/0:40,0:37:98.92:0,99,1014	1/1:3,26:27:58.58:511,59,0	0/0:7,0:19:42.78:0,43,234	0/0:4,0:24:43.21:0,43,217	0/0:5,0:11:19.92:0,20,100	1/1:1,7:8:17.96:148,18,0	1/1:1,8:9:26.88:213,27,0	1/1:2,17:17:50.94:419,51,0	1/1:1,15:16:35.96:296,36,0	0/0:16,0:16:27:0,27,263	0/0:22,0:22:51.13:0,51,544	0/0:9,0:9:24.06:0,24,256
chr10	17558744	.	G	GC	1314.02	PASS	AB=0.696;AC=8;AF=0.143;AN=56;BaseQRankSum=8.356;DP=655;FS=53.287;HRun=0;HaplotypeScore=75.0198;InbreedingCoeff=-0.1611;MQ=75.67;MQ0=0;MQRankSum=-9.494;QD=8.53;ReadPosRankSum=0.806;VQSLOD=1.5707;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,117,1631	0/1:8,5:13:57.51:58,0,225	0/0:20,0:20:60.06:0,60,751	0/0:17,0:17:45.14:0,45,604	0/1:13,16:29:5.50:6,0,346	0/0:32,0:32:93.30:0,93,1283	0/0:32,0:32:96.27:0,96,1286	0/0:25,0:25:69.21:0,69,932	0/1:6,10:16:50.12:50,0,189	0/1:13,10:23:99:412,0,396	0/0:8,5:13:21.06:0,21,278	0/0:27,0:27:78.25:0,78,1067	0/0:24,0:24:72.16:0,72,963	0/0:30,0:30:90.30:0,90,1253	0/0:24,0:24:66.13:0,66,891	0/0:22,0:22:66.22:0,66,918	0/1:6,11:17:99:154,0,164	0/0:27,0:27:78.21:0,78,1050	0/0:21,0:21:60.18:0,60,818	0/0:20,0:20:60.20:0,60,837	0/0:31,0:31:93.28:0,93,1262	0/0:22,0:22:63.20:0,63,862	0/0:22,0:22:63.21:0,63,878	0/0:36,0:36:99:0,99,1368	0/0:15,0:15:45.15:0,45,626	0/1:9,17:25:99:641,0,251	0/1:14,6:20:99:110,0,529	0/1:9,1:10:17.01:17,0,298
chr10	17559014	.	GAA	G	8721.88	PASS	AB=0.651;AC=47;AF=0.870;AN=54;BaseQRankSum=-0.062;DP=508;FS=31.835;HRun=12;HaplotypeScore=90.4593;InbreedingCoeff=-0.1320;MQ=50.29;MQ0=12;MQRankSum=4.184;QD=17.27;ReadPosRankSum=5.010;VQSLOD=1.5336;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,29:38:67.54:699,68,0	1/1:2,2:4:6.01:61,6,0	0/1:4,1:3:15.65:16,0,69	./.	0/1:8,11:19:69.02:187,0,69	1/1:2,9:11:24.05:244,24,0	1/1:7,14:20:27.04:275,27,0	1/1:8,25:31:59.82:657,60,0	1/1:2,18:19:42.09:427,42,0	0/1:7,14:20:3.99:299,0,4	0/1:4,2:5:21.60:22,0,29	1/1:4,14:18:33.06:336,33,0	1/1:4,14:17:33.95:336,34,0	1/1:4,17:21:45.09:458,45,0	1/1:3,14:17:26.91:273,27,0	1/1:4,12:17:29.79:286,30,0	1/1:3,20:23:56.15:556,56,0	0/1:9,13:21:5.51:327,0,6	1/1:10,8:15:21.02:208,21,0	1/1:3,12:15:33.01:331,33,0	1/1:3,6:8:15.01:152,15,0	1/1:5,15:20:36.06:366,36,0	1/1:2,16:19:32.71:317,33,0	1/1:5,19:23:35.81:418,36,0	1/1:5,21:27:50.83:568,51,0	0/1:9,11:20:22.49:324,0,22	1/1:6,10:17:26.77:256,27,0	0/1:3,12:14:22.37:324,0,22
chr10	17559543	.	G	GAGA	26244.34	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-12.696;DP=620;FS=1.296;HRun=0;HaplotypeScore=75.6248;InbreedingCoeff=0.9989;MQ=74.60;MQ0=0;MQRankSum=-4.787;QD=52.70;ReadPosRankSum=6.231;VQSLOD=7.1390;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,26:31:63:1337,63,0	1/1:2,9:13:30.10:661,30,0	0/0:18,0:18:51.17:0,51,775	0/0:16,0:16:33.11:0,33,490	1/1:5,19:25:54.07:1097,54,0	1/1:1,19:20:54.19:1191,54,0	1/1:1,20:21:57.15:1211,57,0	0/0:28,0:28:72.22:0,72,1081	1/1:2,14:16:42.14:926,42,0	1/1:2,20:23:63.22:1367,63,0	1/1:3,21:26:60.12:1227,60,0	1/1:2,21:23:48.16:1058,48,0	1/1:1,18:20:51.13:1078,51,0	1/1:3,21:25:57.20:1258,57,0	1/1:1,15:15:42.14:927,42,0	1/1:0,16:16:36.12:795,36,0	1/1:3,39:43:99:2449,111,0	1/1:0,15:15:42.14:927,42,0	0/0:14,0:14:36.11:0,36,554	0/0:18,0:18:51.17:0,51,820	0/0:28,0:28:81.26:0,81,1279	1/1:3,20:23:51.17:1123,51,0	1/1:2,13:15:39.09:813,39,0	1/1:2,27:30:66.23:1445,66,0	1/1:2,26:28:69.15:1430,69,0	1/1:3,29:32:87.28:1874,87,0	1/1:2,24:29:71.97:1586,72,0	1/1:0,7:7:21.07:463,21,0
chr10	17561421	.	GAAC	G	1246.62	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.691;DP=810;FS=1.623;HRun=0;HaplotypeScore=113.4465;InbreedingCoeff=1.0000;MQ=83.96;MQ0=0;MQRankSum=-0.020;QD=46.17;ReadPosRankSum=3.320;VQSLOD=5.4117;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,114,2744	0/0:15,0:15:45.15:0,45,1080	0/0:24,0:24:72.23:0,72,1576	0/0:27,0:27:63.67:0,64,1531	0/0:15,0:15:45.15:0,45,1056	0/0:23,0:23:69.24:0,69,1684	0/0:44,0:44:99:0,132,3106	0/0:30,0:30:87.28:0,87,1987	1/1:0,27:27:72.25:1342,72,0	0/0:27,0:27:81.28:0,81,1997	0/0:22,0:22:66.23:0,66,1594	0/0:34,0:34:99:0,102,2446	0/0:23,0:23:69.24:0,69,1672	0/0:34,0:34:99:0,99,2406	0/0:32,0:32:96.33:0,96,2331	0/0:29,0:29:87.30:0,87,2123	0/0:32,0:32:93.27:0,93,2139	0/0:26,0:26:78.27:0,78,1923	0/0:19,0:19:57.20:0,57,1383	0/0:29,0:29:87.30:0,87,2137	0/0:77,0:77:99:0,232,5403	0/0:34,0:34:99:0,102,2444	0/0:26,0:26:75.24:0,75,1739	0/0:35,0:35:99:0,105,2554	0/0:22,0:22:66.23:0,66,1596	0/0:26,0:26:75.22:0,75,1796	0/0:23,0:22:69.22:0,69,1599	0/0:15,0:15:45.15:0,45,1108
chr10	17561636	.	C	CT	4655.02	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-8.752;DP=737;FS=1.766;HRun=0;HaplotypeScore=112.4896;InbreedingCoeff=1.0000;MQ=81.26;MQ0=0;MQRankSum=0.676;QD=44.33;ReadPosRankSum=-3.399;VQSLOD=3.5039;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:65,0:65:99:0,184,2523	0/0:14,0:14:39.13:0,39,544	0/0:24,0:24:69.18:0,69,919	0/0:20,0:20:57.15:0,57,732	0/0:31,0:31:93.31:0,93,1296	0/0:16,0:16:45.15:0,45,629	0/0:19,0:19:57.19:0,57,794	1/1:0,30:30:90.23:1299,90,0	0/0:26,0:26:75.22:0,75,1025	0/0:28,0:28:81.27:0,81,1131	0/0:19,0:19:54.18:0,54,754	0/0:28,0:28:84.28:0,84,1174	0/0:29,0:29:84.27:0,84,1154	0/0:27,0:27:81.20:0,81,1075	0/0:24,0:24:72.24:0,72,1006	0/0:23,0:23:69.15:0,69,918	0/0:46,0:46:99:0,135,1885	0/0:27,0:27:75.25:0,75,1048	1/1:1,20:21:60.20:957,60,0	1/1:0,20:20:57.19:911,57,0	1/1:1,33:34:93.32:1487,93,0	0/0:26,0:26:78.17:0,78,1043	0/0:26,0:26:69.23:0,69,962	0/0:31,0:31:87.28:0,87,1198	0/0:19,0:19:54.12:0,54,715	0/0:18,0:18:54.17:0,54,737	0/0:29,0:29:81.27:0,81,1128	0/0:17,0:16:51.17:0,51,712
chr10	17563058	.	CT	C	1286.48	PASS	AB=0.765;AC=17;AF=0.304;AN=56;BaseQRankSum=-6.414;DP=648;FS=0.452;HRun=14;HaplotypeScore=85.8788;InbreedingCoeff=0.6764;MQ=72.32;MQ0=6;MQRankSum=0.236;QD=6.43;ReadPosRankSum=4.346;VQSLOD=2.8507;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:54:66.64:0,67,355	1/1:2,3:5:5.93:41,6,0	0/0:40,0:17:20.95:0,21,161	0/0:22,1:13:7.53:0,8,92	0/1:5,9:15:5.21:99,0,5	0/0:4,0:14:20.23:0,20,113	0/0:8,0:23:34.45:0,34,189	0/0:31,0:32:21.45:0,21,289	0/0:5,0:24:29.88:0,30,155	1/1:9,10:19:29.52:202,30,0	1/1:5,19:24:43.93:302,44,0	0/0:13,0:28:28.42:0,28,153	0/0:4,0:16:20.14:0,20,113	0/0:6,0:14:17.49:0,17,109	0/0:8,0:24:34.15:0,34,174	0/0:7,0:28:28.23:0,28,185	1/1:4,24:30:15.95:302,16,0	0/0:2,0:12:19.97:0,20,103	0/1:19,3:23:16.67:17,0,284	0/1:23,7:30:48.64:49,0,264	0/0:24,0:24:28.13:0,28,280	0/0:6,0:27:48.98:0,49,267	0/0:6,0:24:45.04:0,45,234	0/0:2,0:19:34.26:0,34,177	0/0:5,0:21:22.84:0,23,120	1/1:11,13:24:4.27:191,4,0	1/1:6,11:18:3.89:163,4,0	1/1:3,8:12:16.88:109,17,0
chr10	17565877	.	AG	A	19655.06	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-4.803;DP=815;FS=1.093;HRun=7;HaplotypeScore=85.3662;InbreedingCoeff=0.9999;MQ=88.99;MQ0=0;MQRankSum=-11.109;QD=26.35;ReadPosRankSum=7.889;VQSLOD=4.0907;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,40:43:99:1102,108,0	1/1:1,23:24:63.14:643,63,0	0/0:36,0:36:95.58:0,96,1143	0/0:33,0:33:48.68:0,49,752	1/1:1,20:21:54.12:551,54,0	1/1:2,25:27:69.16:704,69,0	1/1:3,17:20:45.10:459,45,0	1/1:2,19:21:57.09:571,57,0	1/1:3,21:24:63.14:643,63,0	1/1:4,24:28:66.15:673,66,0	1/1:0,28:28:84.19:857,84,0	1/1:3,35:38:99:1010,99,0	1/1:1,24:25:66.15:673,66,0	1/1:2,32:34:90.20:918,90,0	1/1:2,41:43:99:1224,120,0	1/1:4,30:34:87.20:888,87,0	1/1:5,32:37:93.21:949,93,0	1/1:2,27:29:78.17:796,78,0	1/1:5,19:24:51.06:519,51,0	1/1:4,29:33:78.17:794,78,0	1/1:3,24:27:72.16:735,72,0	1/1:5,33:38:93.21:949,93,0	1/1:3,18:21:57.12:581,57,0	1/1:4,16:20:48.10:490,48,0	1/1:4,24:28:66.15:673,66,0	1/1:2,34:36:99:1000,99,0	1/1:1,28:29:84.19:857,84,0	1/1:1,13:14:39.09:398,39,0
chr10	17566369	.	CT	C	17262.21	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-2.232;DP=676;FS=5.440;HRun=7;HaplotypeScore=69.8485;InbreedingCoeff=0.8822;MQ=73.75;MQ0=0;MQRankSum=-4.853;QD=26.31;ReadPosRankSum=4.099;VQSLOD=5.6158;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,25:27:72.16:735,72,0	1/1:1,7:8:21.05:214,21,0	0/0:9,0:9:12.39:0,12,180	0/0:11,0:11:2.97:0,3,83	1/1:3,29:32:72.15:735,72,0	1/1:2,34:36:96.22:979,96,0	1/1:3,17:20:48.10:490,48,0	1/1:2,36:38:99:1064,105,0	1/1:1,19:20:54.12:551,54,0	1/1:4,33:37:96.21:979,96,0	1/1:3,23:26:66.15:673,66,0	1/1:2,21:23:54.12:551,54,0	1/1:0,25:25:72.16:735,72,0	1/1:0,26:26:75.17:764,75,0	1/1:1,19:20:48.11:490,48,0	1/1:0,23:23:66.15:673,66,0	1/1:2,14:16:39.09:398,39,0	1/1:1,19:20:45.10:459,45,0	1/1:2,19:21:57.13:581,57,0	1/1:4,39:43:99:1098,108,0	1/1:1,16:17:42.09:428,42,0	1/1:2,24:26:63.13:643,63,0	1/1:4,22:26:50.99:520,51,0	1/1:1,11:12:30.07:306,30,0	1/1:2,23:25:66.15:673,66,0	1/1:4,31:35:93.15:932,93,0	1/1:0,37:37:99:1071,105,0	1/1:0,17:17:51.12:520,51,0
chr10	17566690	.	TC	T	10239.90	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=9.129;DP=653;FS=1.272;HRun=2;HaplotypeScore=100.7912;InbreedingCoeff=0.9975;MQ=87.65;MQ0=0;MQRankSum=-1.769;QD=35.93;ReadPosRankSum=3.029;VQSLOD=5.0861;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:84.27:0,84,1236	1/1:0,6:6:15.05:195,15,0	0/0:27,0:27:81.19:0,81,1085	0/0:21,0:21:51.08:0,51,683	1/1:0,35:35:99:1224,99,0	0/0:43,0:43:99:0,126,1865	0/0:19,0:19:24.42:0,24,670	1/1:1,24:25:72.22:921,72,0	0/0:19,0:19:57.19:0,57,853	1/1:1,37:38:99:1437,111,0	1/1:0,23:23:63.16:799,63,0	0/0:26,0:26:72.22:0,72,1039	0/0:20,0:20:56.86:0,57,818	0/0:19,0:19:54.13:0,54,744	0/0:24,0:24:72.23:0,72,1042	0/0:25,0:25:75.24:0,75,1103	1/1:0,17:17:48.16:623,48,0	0/0:11,0:11:33.08:0,33,468	1/1:0,15:15:45.14:572,45,0	1/1:0,34:34:99:1266,99,0	1/1:1,17:18:45.62:585,46,0	0/0:25,0:25:75.25:0,75,1122	0/0:27,0:27:81.26:0,81,1192	0/0:16,0:16:48.16:0,48,719	0/0:16,0:16:48.15:0,48,697	1/1:0,25:25:75.21:944,75,0	1/1:0,34:34:87.28:1129,87,0	1/1:0,15:15:42.14:545,42,0
chr10	17567535	.	TG	T	9337.62	PASS	AB=0.650;AC=43;AF=0.768;AN=56;BaseQRankSum=-4.220;DP=609;FS=5.422;HRun=10;HaplotypeScore=93.5527;InbreedingCoeff=0.7051;MQ=73.29;MQ0=1;MQRankSum=1.475;QD=18.94;ReadPosRankSum=6.462;VQSLOD=4.8766;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,27:35:46.62:623,47,0	1/1:3,6:9:17.99:156,18,0	0/0:17,0:13:3.71:0,4,61	0/0:20,0:19:15.30:0,15,133	0/1:6,7:13:11.63:136,0,12	1/1:6,15:21:41.95:364,42,0	1/1:7,21:28:62.97:547,63,0	0/0:27,0:33:22.48:0,22,133	1/1:3,16:19:53.97:464,54,0	1/1:5,9:14:29.97:256,30,0	1/1:6,3:9:4.53:89,5,0	1/1:12,16:28:56.86:485,57,0	1/1:7,11:18:35.98:312,36,0	1/1:7,21:30:46.30:535,46,0	1/1:8,34:42:99:937,108,0	1/1:7,37:44:99:987,114,0	1/1:9,23:32:71.97:624,72,0	1/1:2,16:18:44.99:391,45,0	0/0:12,1:16:0.94:0,1,129	0/0:6,0:6:0.47:0,0,1	0/0:20,1:24:3.44:0,3,169	1/1:5,10:15:29.99:260,30,0	1/1:7,9:16:26.96:230,27,0	1/1:7,20:28:66.26:556,66,0	1/1:8,13:21:44.99:390,45,0	1/1:5,10:15:32.94:276,33,0	1/1:6,19:26:31.84:493,32,0	1/1:4,8:12:26.97:228,27,0
chr10	17567877	.	CCCCTT	C	1900.18	PASS	AB=0.934;AC=22;AF=0.393;AN=56;BaseQRankSum=2.831;DP=743;FS=3.318;HRun=0;HaplotypeScore=186.8766;InbreedingCoeff=-0.6145;MQ=36.66;MQ0=49;MQRankSum=-1.124;QD=3.89;ReadPosRankSum=0.139;VQSLOD=2.8180;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:47,3:50:99:101,0,688	0/1:4,1:5:4.81:5,0,165	0/0:82,0:18:21.03:0,21,474	0/0:108,0:33:83.85:0,84,1263	0/1:21,0:19:13.11:13,0,176	0/1:15,0:14:54.40:54,0,159	0/1:19,5:18:40.74:41,0,304	0/1:24,13:32:99:605,0,383	0/0:21,0:21:55.69:0,56,755	0/1:17,1:15:88.58:89,0,354	0/1:15,0:14:4.74:5,0,281	0/1:24,4:26:81.86:82,0,385	0/1:15,6:20:89.16:89,0,319	0/1:23,1:24:53.46:53,0,313	0/1:23,0:22:98.82:99,0,251	0/1:23,0:22:89.17:89,0,318	0/1:17,0:17:99:114,0,283	0/1:11,0:11:71.04:71,0,277	0/1:31,0:25:99:133,0,305	0/1:15,0:11:6.13:6,0,190	0/0:23,0:20:38.08:0,38,403	0/1:5,3:8:74.57:125,0,75	0/1:21,1:22:20.28:20,0,251	0/1:33,1:32:99:101,0,368	0/1:21,0:19:22.91:23,0,318	0/1:23,0:22:99:138,0,383	0/0:15,0:13:35.65:0,36,401	0/0:4,0:4:11.77:0,12,152
chr10	17567902	.	CT	C	1047.84	PASS	AB=0.963;AC=25;AF=0.446;AN=56;BaseQRankSum=7.548;DP=764;FS=0.000;HRun=1;HaplotypeScore=165.3444;InbreedingCoeff=-0.3352;MQ=38.83;MQ0=53;MQRankSum=-1.142;QD=2.48;ReadPosRankSum=0.450;VQSLOD=-0.6725;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:51,1:50:20.19:20,0,220	1/1:3,2:5:3.01:40,3,0	0/0:86,0:17:47.81:0,48,636	0/0:127,1:33:91.74:0,92,1184	0/0:25,4:25:2.98:0,3,27	0/0:16,0:14:1.33:0,1,6	1/1:22,0:15:0.16:2,0,0	0/0:40,0:35:7.07:0,7,879	0/1:21,0:21:22.68:23,0,144	0/1:14,0:11:96.67:97,0,142	0/1:21,2:22:0.35:65,0,0	0/1:29,0:27:99:112,0,186	0/1:14,1:14:50.04:50,0,69	0/1:23,0:23:12.49:12,0,213	1/1:20,0:20:14.75:78,15,0	0/1:25,0:24:89.93:90,0,163	0/1:16,4:20:99:143,0,246	0/1:10,0:10:20.12:20,0,153	0/1:21,0:19:45.03:45,0,447	0/1:18,1:16:22.36:22,0,31	1/1:15,0:11:1.52:3,2,0	0/0:10,0:10:2.80:0,3,213	0/1:16,0:16:11.35:11,0,40	0/0:32,1:33:31.85:0,32,396	0/1:17,0:16:22.81:23,0,80	0/1:24,4:26:99:209,0,569	0/1:17,3:17:99:128,0,145	0/1:6,0:6:5.88:6,0,129
chr10	17567904	.	C	CCT	552.63	PASS	AB=0.970;AC=18;AF=0.321;AN=56;BaseQRankSum=8.723;DP=772;FS=10.514;HRun=0;HaplotypeScore=174.9351;InbreedingCoeff=-0.2108;MQ=39.05;MQ0=54;MQRankSum=-3.008;QD=1.66;ReadPosRankSum=-0.288;VQSLOD=2.0560;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:54,0:52:46.81:47,0,208	1/1:5,0:5:2.04:6,2,0	0/0:83,0:16:44.81:0,45,621	0/0:125,0:31:83.52:0,84,1205	0/0:29,0:25:6:0,6,68	0/0:15,1:14:3.01:0,3,43	0/0:22,0:15:0.32:0,0,5	0/0:40,0:35:68.77:0,69,1193	0/1:22,0:21:58.90:59,0,137	0/0:15,0:12:5.43:0,5,240	0/1:23,0:22:34.55:39,0,35	0/1:28,1:27:91.19:91,0,166	0/1:14,1:14:11.17:86,0,11	0/1:21,2:23:25.35:25,0,212	1/1:20,0:20:0.33:104,0,0	0/1:25,1:25:67.67:68,0,205	0/0:20,0:20:3.28:0,3,220	0/1:10,2:12:50.76:51,0,187	0/0:20,0:18:31.22:0,31,603	0/1:20,0:17:12.50:13,0,32	1/1:16,0:12:0.47:1,0,0	0/0:10,0:10:11.22:0,11,249	0/0:16,0:16:5.23:0,5,66	0/0:34,2:36:33.43:0,33,428	0/1:18,0:17:45.08:45,0,62	0/1:30,0:28:46.33:46,0,511	0/1:20,0:17:17.68:18,0,227	0/0:6,0:6:10.94:0,11,88
chr10	17567944	.	CTGTG	C	2985.83	PASS	AB=0.714;AC=15;AF=0.268;AN=56;BaseQRankSum=6.429;DP=591;FS=5.925;HRun=0;HaplotypeScore=103.3723;InbreedingCoeff=0.8295;MQ=38.79;MQ0=54;MQRankSum=1.519;QD=28.99;ReadPosRankSum=2.133;VQSLOD=3.0264;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:40:39.13:0,39,930	1/1:1,1:2:3.01:53,3,0	0/0:74,0:5:14.94:0,15,180	0/0:88,0:12:27.09:0,27,433	1/1:5,8:13:20.86:344,21,0	0/0:12,0:10:15.04:0,15,274	0/0:23,0:23:42.56:0,43,952	0/0:40,0:36:72.11:0,72,1138	0/0:9,0:8:9.03:0,9,188	1/1:2,17:19:34.98:768,35,0	1/1:3,8:10:11.88:206,12,0	0/0:18,0:17:30.10:0,30,715	0/0:9,0:9:24.83:0,25,400	0/0:21,0:21:33.05:0,33,780	0/0:13,0:13:12.04:0,12,308	0/0:16,0:16:39.13:0,39,913	1/1:6,6:12:18.06:304,18,0	0/0:9,0:9:27.09:0,27,689	0/0:17,0:12:23.58:0,24,355	0/0:19,0:19:47.95:0,48,1057	0/0:19,0:17:24.06:0,24,508	0/0:12,1:13:24.07:0,24,530	0/0:2,0:2:3.01:0,3,77	0/0:30,0:29:29.99:0,30,737	0/0:14,0:14:33.10:0,33,790	1/1:4,17:20:31.14:755,31,0	1/1:1,19:20:35.77:629,36,0	0/1:3,2:5:8.97:117,0,9
chr10	17568065	.	GTTAATTAATTAA	G	13177.12	PASS	AC=50;AF=1.000;AN=50;DP=367;FS=0.000;HRun=0;HaplotypeScore=131.8092;InbreedingCoeff=-0.0367;MQ=58.34;MQ0=0;QD=37.33;VQSLOD=4.3130;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,16:26:21.07:688,21,0	1/1:7,4:11:12.04:421,12,0	./.	./.	1/1:11,12:23:27.09:833,27,0	1/1:9,8:17:12.04:420,12,0	1/1:2,7:9:12.04:419,12,0	1/1:31,9:40:27.03:667,27,0	1/1:3,4:7:9.03:315,9,0	1/1:12,5:17:18.06:624,18,0	1/1:10,18:28:45.15:1503,45,0	1/1:4,8:12:15.05:526,15,0	1/1:7,4:11:12.04:422,12,0	1/1:4,3:7:6.02:211,6,0	1/1:6,4:10:9.03:315,9,0	1/1:5,4:9:12.04:422,12,0	1/1:11,9:20:12.04:422,12,0	1/1:3,4:7:9.03:316,9,0	1/1:4,5:9:15.04:433,15,0	1/1:5,16:21:33.11:1061,33,0	1/1:10,0:10:2.99:24,3,0	1/1:3,7:10:15.05:526,15,0	1/1:5,4:9:9.03:315,9,0	./.	1/1:6,12:18:36.12:1260,36,0	1/1:3,7:10:20.99:616,21,0	1/1:4,6:10:9.03:316,9,0	1/1:0,1:1:3.01:105,3,0
chr10	17568558	.	TCAGACAGA	T	7897.49	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=11.012;DP=682;FS=1.418;HRun=0;HaplotypeScore=201.2699;InbreedingCoeff=0.9302;MQ=67.59;MQ0=5;MQRankSum=-11.189;QD=26.59;ReadPosRankSum=1.009;VQSLOD=4.1366;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:90.31:0,90,3591	1/1:4,0:8:8.77:124,9,0	0/0:42,0:26:9.02:0,9,114	0/0:44,0:27:22.78:0,23,418	1/1:14,0:26:27.09:503,27,0	1/1:14,15:29:30.10:741,30,0	1/1:12,13:25:27.09:633,27,0	0/0:34,0:34:45.15:0,45,1408	1/1:10,14:24:33.11:829,33,0	1/1:13,0:19:17.85:265,18,0	1/1:2,0:11:24.08:447,24,0	0/0:27,0:27:54.19:0,54,2071	0/0:28,0:28:66.23:0,66,2504	0/0:24,0:24:39.13:0,39,1575	1/1:8,22:30:36.12:902,36,0	1/1:7,14:21:36.12:886,36,0	1/1:12,0:18:6.02:112,6,0	1/1:5,3:8:9.03:226,9,0	0/0:10,0:13:15.04:0,15,428	0/0:19,0:32:36.11:0,36,1104	0/0:25,0:30:14.33:0,14,350	0/0:21,0:21:33.09:0,33,1114	0/0:23,0:23:39.13:0,39,1455	0/0:27,0:28:54.19:0,54,2137	1/1:6,14:20:24.08:605,24,0	1/1:10,0:25:38.41:676,38,0	1/1:15,0:30:48.16:892,48,0	1/1:1,0:3:3.01:56,3,0
chr10	17568861	.	G	GTA	20460.08	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-3.774;DP=597;FS=0.000;HRun=0;HaplotypeScore=95.9111;InbreedingCoeff=0.9584;MQ=69.75;MQ0=3;MQRankSum=-3.939;QD=36.21;ReadPosRankSum=3.555;VQSLOD=6.8325;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,17:23:33.11:571,33,0	1/1:1,13:14:33.11:571,33,0	0/0:18,0:16:24.51:0,25,278	0/0:14,0:13:15.78:0,16,187	1/1:1,30:32:60.21:1038,60,0	1/1:3,27:29:69.24:1195,69,0	1/1:1,11:12:12.04:208,12,0	1/1:4,39:44:99:1882,120,0	1/1:3,18:20:39.13:675,39,0	1/1:2,28:31:75.23:1252,75,0	1/1:5,18:23:42.14:727,42,0	1/1:4,14:18:36.12:623,36,0	1/1:1,22:23:51.17:883,51,0	1/1:1,10:12:27.09:465,27,0	1/1:3,18:22:42.14:727,42,0	1/1:1,21:22:45.15:779,45,0	1/1:6,21:26:14.25:843,14,0	1/1:1,10:11:30.10:519,30,0	1/1:5,12:17:36.12:604,36,0	1/1:3,37:40:93.32:1610,93,0	1/1:2,13:15:27.09:467,27,0	1/1:1,9:10:24.08:416,24,0	1/1:4,19:23:54.18:935,54,0	1/1:1,9:10:21.07:363,21,0	1/1:3,23:26:42.14:727,42,0	1/1:4,22:26:63.18:1031,63,0	1/1:0,26:25:60.21:1038,60,0	1/1:0,7:7:18.06:312,18,0
chr10	17570019	.	C	CA	432.19	PASS	AB=0.979;AC=13;AF=0.232;AN=56;BaseQRankSum=9.854;DP=1081;FS=97.901;HRun=1;HaplotypeScore=278.5427;InbreedingCoeff=-0.1927;MQ=34.37;MQ0=85;MQRankSum=-8.535;QD=0.85;ReadPosRankSum=-2.482;VQSLOD=-0.7125;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:54,1:45:25.51:0,26,379	0/0:13,0:9:8.02:0,8,107	0/0:24,0:9:26.67:0,27,305	0/0:31,0:14:42.13:0,42,531	0/0:30,0:24:8.63:0,9,115	0/0:30,0:26:2.09:0,2,261	0/0:69,1:51:52.08:0,52,600	0/0:55,0:32:43.30:0,43,634	0/1:42,0:36:14.42:14,0,247	0/1:45,0:29:22.68:23,0,211	1/1:14,1:9:3.10:11,3,0	0/1:48,1:38:8.84:9,0,389	0/1:39,1:30:65.80:66,0,279	0/1:48,1:37:86.98:87,0,324	0/0:40,0:26:18.62:0,19,220	0/0:44,0:39:19.31:0,19,411	0/1:40,2:33:85.38:85,0,354	0/1:43,3:32:81.90:82,0,513	0/0:30,0:21:28.89:0,29,414	0/0:28,0:21:13.63:0,14,190	0/1:85,1:54:73.49:92,0,73	0/1:36,0:34:24.30:24,0,214	0/1:20,0:17:22.64:23,0,104	0/0:50,0:34:24.34:0,24,443	0/0:35,1:29:34.93:0,35,372	0/1:32,0:23:64.93:65,0,171	0/0:20,0:14:26.40:0,26,284	0/0:9,0:4:2.79:0,3,59
chr10	17570026	.	AC	A	1609.06	PASS	AB=0.979;AC=24;AF=0.429;AN=56;BaseQRankSum=10.963;DP=1241;FS=115.791;HRun=1;HaplotypeScore=308.3908;InbreedingCoeff=-0.0946;MQ=28.57;MQ0=125;MQRankSum=-7.857;QD=1.71;ReadPosRankSum=1.473;VQSLOD=-0.7059;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:64,0:49:58.92:59,0,242	1/1:14,1:9:8.15:61,8,0	0/0:20,0:5:15.05:0,15,191	0/0:27,0:11:33.11:0,33,419	1/1:30,0:21:2.37:13,2,0	0/1:30,0:22:19.17:19,0,124	0/1:85,1:59:0.28:0,0,511	0/1:78,3:45:9.12:9,0,720	0/1:61,0:45:99:202,0,300	0/1:60,2:37:99:138,0,164	1/1:27,0:17:4.81:47,5,0	0/1:50,2:40:98.62:99,0,400	0/1:37,4:32:99:169,0,262	0/1:53,3:36:99:177,0,319	0/0:41,2:27:18.41:0,18,246	0/1:52,0:43:82.95:83,0,324	1/1:41,0:35:17.78:258,18,0	0/1:47,2:33:78.48:78,0,493	0/1:27,0:18:17.26:17,0,277	0/0:29,0:22:7.51:0,8,145	0/1:94,1:59:86.20:86,0,92	0/0:43,0:37:6.94:0,7,199	0/0:23,0:17:5.47:0,5,75	0/0:58,0:41:37.91:0,38,486	0/0:42,0:30:22.72:0,23,346	0/1:39,0:26:70.65:71,0,90	1/1:20,0:16:27.84:195,28,0	0/0:11,0:4:6.71:0,7,35
chr10	17570027	.	CA	C	1792.77	PASS	AB=0.965;AC=22;AF=0.393;AN=56;BaseQRankSum=9.860;DP=1271;FS=101.626;HRun=1;HaplotypeScore=324.5535;InbreedingCoeff=-0.2167;MQ=28.22;MQ0=129;MQRankSum=-9.429;QD=2.00;ReadPosRankSum=1.824;VQSLOD=-0.4778;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:65,0:51:44.66:45,0,249	0/1:13,2:9:3.36:106,0,3	0/0:18,0:4:12.04:0,12,153	0/0:26,0:10:30.10:0,30,381	1/1:22,11:22:2.58:40,3,0	0/1:30,0:22:17.59:18,0,144	0/1:88,0:61:1.64:2,0,564	0/0:81,3:46:1.06:0,1,760	0/1:61,0:46:77.04:77,0,305	0/1:56,6:38:99:296,0,189	1/1:25,2:18:4.84:62,5,0	0/1:55,0:40:43.48:43,0,423	0/1:42,1:32:59.62:60,0,297	0/1:56,0:36:86.29:86,0,307	0/0:46,0:27:16.78:0,17,244	0/1:55,0:46:72.69:73,0,337	0/1:39,4:35:15.56:369,0,16	0/1:47,0:33:54.80:55,0,483	0/1:28,0:18:51.18:51,0,261	0/0:29,0:22:14.66:0,15,150	0/1:99,2:64:47.95:48,0,116	0/0:45,0:37:7.36:0,7,199	0/0:25,0:19:5.38:0,5,75	0/0:57,1:41:40.12:0,40,469	0/0:43,0:31:21.17:0,21,349	0/1:36,4:26:99:197,0,108	1/1:14,9:17:28.15:324,28,0	0/1:10,2:5:2.09:2,0,4
chr10	17570028	.	AC	A	1884.44	PASS	AB=0.977;AC=25;AF=0.446;AN=56;BaseQRankSum=10.524;DP=1280;FS=117.658;HRun=1;HaplotypeScore=320.8878;InbreedingCoeff=-0.2927;MQ=27.79;MQ0=139;MQRankSum=-7.892;QD=1.79;ReadPosRankSum=1.780;VQSLOD=-0.6488;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:60,5:50:74.15:74,0,261	1/1:15,1:10:9.18:68,9,0	0/0:17,0:4:12.04:0,12,152	0/0:24,0:9:27.09:0,27,341	1/1:34,1:22:2.44:15,2,0	0/1:29,0:21:5.32:5,0,133	0/1:89,1:62:30.27:30,0,524	0/1:87,0:48:12.04:12,0,832	0/1:58,4:46:99:177,0,296	0/1:60,2:37:99:188,0,207	1/1:28,0:18:6.86:67,7,0	0/1:53,0:41:80.90:81,0,391	0/1:44,0:32:99:137,0,272	0/1:57,0:36:99:176,0,312	0/0:47,0:27:17.72:0,18,245	0/1:56,0:46:72.02:72,0,320	0/1:41,3:34:22.99:275,0,23	0/1:46,2:32:99:160,0,486	0/1:29,0:17:35.60:36,0,267	0/0:27,1:21:5.29:0,5,109	0/1:100,2:67:88.75:121,0,89	0/1:44,1:37:22.72:23,0,188	0/1:23,2:19:10.73:11,0,67	0/0:56,1:40:33.61:0,34,420	0/0:44,1:33:19.01:0,19,354	0/1:40,0:26:99:102,0,151	1/1:23,0:17:28.77:223,29,0	0/0:11,0:4:4.29:0,4,11
chr10	17570029	.	CA	C	967.07	PASS	AB=0.968;AC=24;AF=0.429;AN=56;BaseQRankSum=10.365;DP=1303;FS=101.571;HRun=1;HaplotypeScore=334.8411;InbreedingCoeff=-0.2556;MQ=27.50;MQ0=146;MQRankSum=-5.823;QD=1.00;ReadPosRankSum=1.852;VQSLOD=-0.6397;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:62,2:50:47.13:47,0,228	1/1:15,1:10:1.98:17,2,0	0/0:17,0:4:12.04:0,12,153	0/0:23,0:8:24.07:0,24,290	1/1:32,3:22:0.81:3,1,0	0/1:30,1:23:14.05:14,0,150	0/1:85,3:63:33.54:34,0,553	0/0:87,3:51:17.52:0,18,846	0/1:59,1:46:49.39:49,0,298	0/1:55,7:37:99:182,0,259	1/1:27,0:17:3.81:22,4,0	0/1:54,2:43:17.96:18,0,428	0/1:43,1:32:35.80:36,0,320	0/1:56,2:37:85.09:85,0,311	0/0:44,1:27:8.15:0,8,234	0/1:53,1:45:61.51:62,0,316	0/1:39,2:33:10.65:119,0,11	0/1:46,0:32:85.62:86,0,498	0/1:30,1:18:58.76:59,0,285	0/0:26,2:21:11.66:0,12,125	0/1:108,1:71:44.74:45,0,112	0/1:43,3:38:14.96:15,0,191	0/0:26,1:21:5.57:0,6,76	0/0:57,1:41:34.46:0,34,439	0/0:44,1:33:16.10:0,16,348	0/1:40,2:27:99:109,0,180	1/1:23,0:17:19.35:118,19,0	0/1:11,0:4:3.89:11,0,4
chr10	17570035	.	CA	C	1274.63	PASS	AB=0.975;AC=19;AF=0.352;AN=54;BaseQRankSum=9.698;DP=1373;FS=125.081;HRun=1;HaplotypeScore=368.8551;InbreedingCoeff=-0.4373;MQ=25.25;MQ0=160;MQRankSum=-5.630;QD=1.35;ReadPosRankSum=2.691;VQSLOD=-0.3814;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:70,2:52:86.81:87,0,130	0/1:18,2:14:1.88:2,0,61	./.	0/0:15,1:3:9.03:0,9,114	0/0:35,3:24:4.37:0,4,43	0/1:32,0:22:67.99:68,0,132	0/1:105,0:70:90.86:91,0,476	0/0:89,5:48:16.92:0,17,656	0/1:58,2:44:99:107,0,217	0/1:61,1:40:99:137,0,382	1/1:28,2:17:3.61:16,4,0	0/1:61,1:44:93.75:94,0,321	0/1:50,1:37:99:215,0,154	0/1:62,1:40:99:172,0,178	0/1:48,1:29:8.23:8,0,122	0/0:58,1:47:21.36:0,21,384	0/1:45,0:33:99:155,0,146	0/1:47,2:32:5.42:5,0,498	0/1:32,0:17:22.07:22,0,154	0/0:25,2:19:3.15:0,3,40	0/1:123,1:80:87.91:88,0,91	0/0:42,2:35:13.49:0,13,214	0/0:26,3:20:2.08:0,2,35	0/0:62,1:45:34.43:0,34,448	0/0:48,1:36:10.86:0,11,286	0/1:42,2:28:97.98:98,0,144	0/1:16,2:14:42.87:43,0,82	0/1:11,0:4:15.84:16,0,31
chr10	17570036	.	AC	A	2162.14	PASS	AB=0.970;AC=19;AF=0.352;AN=54;BaseQRankSum=9.346;DP=1384;FS=126.758;HRun=1;HaplotypeScore=368.3515;InbreedingCoeff=-0.4923;MQ=25.18;MQ0=163;MQRankSum=-7.169;QD=2.08;ReadPosRankSum=3.500;VQSLOD=-0.3527;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:69,4:53:99:102,0,133	0/1:22,1:16:21.30:21,0,66	./.	0/0:16,0:3:9.03:0,9,114	0/0:36,0:24:4.16:0,4,43	0/1:31,0:22:66.41:66,0,130	0/1:105,2:70:99:190,0,476	0/1:92,2:48:6.51:7,0,596	0/1:61,2:44:99:275,0,210	0/1:62,2:40:99:159,0,375	1/1:30,2:19:3.82:15,4,0	0/1:61,1:44:99:136,0,356	0/1:50,0:36:99:288,0,160	0/1:64,2:40:99:259,0,209	0/1:51,1:29:1.58:2,0,121	0/0:59,0:47:2.88:0,3,360	0/1:40,5:33:99:237,0,114	0/1:48,1:32:99:100,0,466	0/1:33,1:18:52.90:53,0,152	0/0:27,0:19:2.22:0,2,37	0/1:122,4:81:67.08:197,0,67	0/0:44,0:35:4.98:0,5,195	0/0:26,1:19:2.09:0,2,37	0/0:63,1:46:35.32:0,35,461	0/0:48,0:34:29.81:0,30,305	0/1:40,4:29:99:158,0,184	0/1:18,0:14:40.24:40,0,91	0/0:11,0:4:0.25:0,0,33
chr10	17570038	.	AC	A	2476.24	PASS	AB=0.977;AC=20;AF=0.370;AN=54;BaseQRankSum=7.189;DP=1412;FS=65.248;HRun=1;HaplotypeScore=367.9014;InbreedingCoeff=-0.5267;MQ=24.75;MQ0=177;MQRankSum=-6.170;QD=2.23;ReadPosRankSum=4.381;VQSLOD=-0.4981;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:72,1:52:99:117,0,185	0/1:22,1:16:23.91:24,0,68	./.	0/0:16,0:3:9.03:0,9,114	0/0:36,0:24:5.39:0,5,41	0/1:30,0:20:50.49:50,0,109	0/1:109,1:71:99:201,0,468	0/1:90,3:46:99:175,0,420	0/1:60,3:44:99:268,0,251	0/1:66,2:41:99:173,0,328	1/1:31,1:19:4.50:24,5,0	0/1:60,2:44:98.35:98,0,427	0/1:48,2:35:99:320,0,191	0/1:65,3:40:99:254,0,254	0/0:51,2:29:10.44:0,10,150	0/1:58,0:46:57.69:58,0,352	0/1:44,1:33:79.21:178,0,79	0/1:48,1:32:99:184,0,487	0/1:37,0:18:90.63:91,0,98	0/0:28,1:19:2.21:0,2,37	0/1:118,7:84:63.11:202,0,63	0/1:44,1:35:2.20:2,0,181	0/0:27,1:19:2.09:0,2,37	0/0:61,4:48:37.45:0,37,475	0/0:51,1:37:10.63:0,11,268	0/1:45,1:29:99:167,0,175	0/1:18,0:14:35.98:36,0,60	0/0:11,0:4:0.16:0,0,26
chr10	17570040	.	AC	A	2050.86	PASS	AB=0.982;AC=21;AF=0.389;AN=54;BaseQRankSum=7.914;DP=1435;FS=90.840;HRun=1;HaplotypeScore=373.0930;InbreedingCoeff=-0.5386;MQ=24.42;MQ0=189;MQRankSum=-5.218;QD=1.78;ReadPosRankSum=3.558;VQSLOD=-0.3504;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:72,2:53:99:118,0,176	0/1:23,0:16:32.17:32,0,35	./.	0/0:16,0:3:9.03:0,9,113	0/0:38,1:24:4.17:0,4,18	0/1:30,0:20:46.08:46,0,109	0/1:108,2:71:99:165,0,519	0/1:100,1:48:99:122,0,451	0/1:59,4:44:99:194,0,287	0/1:67,1:41:99:167,0,267	1/1:30,1:19:4.50:24,5,0	0/1:64,0:44:38.55:39,0,359	0/1:48,1:35:99:281,0,221	0/1:68,0:40:99:186,0,232	0/1:55,1:29:0.26:0,0,117	0/1:58,0:47:68.77:69,0,379	0/1:43,3:33:72.56:175,0,73	0/1:46,3:32:99:245,0,429	0/1:39,1:18:76.49:116,0,76	0/0:30,0:19:2.19:0,2,37	0/1:128,4:85:60.58:144,0,61	0/0:41,0:33:9.16:0,9,196	0/0:27,1:19:0.56:0,1,34	0/0:65,0:48:34.87:0,35,421	0/0:50,0:35:12.01:0,12,259	0/1:50,0:31:57.09:57,0,159	0/1:17,0:14:11.87:12,0,16	0/1:11,0:4:6.56:7,0,18
chr10	17570042	.	AC	A	1450.50	PASS	AB=0.960;AC=22;AF=0.407;AN=54;BaseQRankSum=8.065;DP=1467;FS=114.675;HRun=1;HaplotypeScore=384.3555;InbreedingCoeff=-0.3362;MQ=23.94;MQ0=203;MQRankSum=-5.833;QD=1.28;ReadPosRankSum=3.535;VQSLOD=-0.2948;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:72,3:52:99:109,0,131	1/1:23,1:17:11.63:62,12,0	./.	0/0:13,0:1:3:0,3,28	0/0:42,0:25:1.11:0,1,4	0/1:30,0:21:19.80:20,0,100	0/1:110,1:72:66.47:66,0,604	0/0:97,1:49:5.55:0,6,653	0/1:60,3:43:99:126,0,340	0/1:70,4:44:99:146,0,266	1/1:30,2:19:4.51:25,5,0	0/1:64,3:47:8.78:9,0,300	0/1:48,4:36:99:178,0,223	0/1:65,3:39:98.10:98,0,160	0/1:51,4:29:0.55:1,0,106	0/1:51,6:46:39.36:39,0,307	0/1:46,2:35:61.07:185,0,61	0/1:50,1:33:99:159,0,514	0/1:43,1:18:59.58:60,0,191	0/0:31,0:20:2.19:0,2,37	0/1:136,3:88:67.74:133,0,68	0/0:45,0:35:10.53:0,11,196	0/0:27,1:18:5.09:0,5,67	0/1:64,1:45:28.43:28,0,244	0/0:49,1:34:32.89:0,33,291	0/1:45,4:33:57.67:58,0,252	1/1:16,2:14:7.93:101,8,0	0/0:11,0:4:6.52:0,7,29
chr10	17570044	.	AC	A	1898.41	PASS	AB=0.941;AC=22;AF=0.423;AN=52;BaseQRankSum=7.691;DP=1463;FS=95.443;HRun=1;HaplotypeScore=392.6750;InbreedingCoeff=-0.3328;MQ=23.54;MQ0=206;MQRankSum=-1.741;QD=1.69;ReadPosRankSum=4.095;VQSLOD=-0.1796;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:65,8:51:99:118,0,137	0/1:22,2:18:12.19:63,0,12	./.	./.	1/1:37,2:24:2.46:14,2,0	0/1:27,3:21:38.88:39,0,108	0/1:104,10:73:99:169,0,529	0/0:101,3:47:26.17:0,26,743	0/1:62,0:42:99:134,0,257	0/1:67,6:44:99:198,0,393	1/1:33,1:19:4.92:31,5,0	0/1:62,5:48:99:184,0,221	0/1:48,3:36:99:177,0,341	0/1:62,7:39:99:167,0,139	0/0:54,2:29:12.89:0,13,186	0/1:55,2:46:51.61:52,0,332	0/1:46,3:35:38.62:181,0,39	0/1:51,3:34:99:124,0,558	0/1:45,0:18:48.50:48,0,239	0/0:29,1:18:3.90:0,4,40	0/1:127,12:87:76.26:144,0,76	0/0:36,5:33:12.91:0,13,153	0/0:26,1:16:4.88:0,5,57	0/1:62,5:46:0.92:1,0,136	0/0:47,1:32:27.28:0,27,255	0/1:51,0:34:34.70:35,0,309	1/1:19,0:15:20.17:174,20,0	0/0:11,0:4:8.87:0,9,62
chr10	17570045	.	CA	C	1633.27	PASS	AB=0.952;AC=23;AF=0.442;AN=52;BaseQRankSum=7.438;DP=1471;FS=56.708;HRun=1;HaplotypeScore=396.3087;InbreedingCoeff=-0.5390;MQ=23.34;MQ0=211;MQRankSum=-4.141;QD=1.29;ReadPosRankSum=4.232;VQSLOD=-0.6949;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:73,1:53:70.86:71,0,79	0/1:22,2:18:25.57:83,0,26	./.	./.	1/1:34,5:23:2.45:23,2,0	0/1:30,0:20:39.78:40,0,139	0/1:112,0:73:72.61:73,0,533	0/1:99,4:47:4.07:4,0,603	0/1:61,5:45:99:131,0,252	0/1:69,4:44:99:204,0,456	1/1:31,3:19:4.15:43,4,0	0/1:65,4:47:99:160,0,159	0/1:49,1:35:99:155,0,291	0/1:67,2:39:99:115,0,142	0/0:56,0:30:17.85:0,18,212	0/1:53,3:44:51.63:52,0,303	0/1:49,3:37:40.65:215,0,41	0/1:54,0:34:18.84:19,0,548	0/1:45,2:18:63.45:63,0,208	0/0:28,2:18:3.90:0,4,40	0/1:132,10:89:48.94:49,0,132	0/0:45,0:33:14.56:0,15,124	0/1:25,1:15:8.71:9,0,19	0/1:62,3:45:16.81:17,0,39	0/0:43,3:30:23.13:0,23,242	0/1:49,5:36:94.19:94,0,284	0/1:14,4:15:13.36:165,0,13	0/0:11,0:4:7.75:0,8,57
chr10	17570046	.	AC	A	2597.61	PASS	AB=0.938;AC=22;AF=0.423;AN=52;BaseQRankSum=7.191;DP=1474;FS=91.363;HRun=1;HaplotypeScore=391.6268;InbreedingCoeff=-0.5183;MQ=23.26;MQ0=210;MQRankSum=-2.718;QD=2.09;ReadPosRankSum=4.065;VQSLOD=-0.4851;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:70,3:51:99:147,0,114	0/1:24,1:19:2.73:55,0,3	./.	./.	1/1:38,2:23:2.63:40,3,0	0/1:28,1:20:69.35:69,0,154	0/1:104,10:73:99:235,0,476	0/1:100,5:48:50.43:50,0,612	0/1:58,8:45:99:261,0,197	0/1:69,5:44:99:208,0,494	1/1:33,0:19:4.55:28,5,0	0/1:63,3:45:93.67:195,0,94	0/1:47,5:35:99:229,0,281	0/1:59,8:39:99:218,0,149	0/0:51,5:29:2.97:0,3,161	0/1:53,3:44:99:120,0,305	0/1:46,5:38:99:288,0,102	0/1:51,4:34:99:115,0,561	0/1:41,2:18:35.29:35,0,259	0/0:29,1:18:3.90:0,4,40	0/1:132,10:90:99:184,0,118	0/0:40,1:33:8.58:0,9,101	0/0:28,0:15:4.83:0,5,47	0/1:65,1:46:37.77:81,0,38	0/0:46,0:30:10.50:0,11,188	0/1:51,3:36:65.06:65,0,346	0/1:15,2:15:27.13:121,0,27	0/0:10,0:4:8.44:0,8,72
chr10	17570054	.	ACAC	A	1291.08	PASS	AB=0.991;AC=25;AF=0.481;AN=52;BaseQRankSum=-1.278;DP=1519;FS=39.677;HRun=0;HaplotypeScore=416.9420;InbreedingCoeff=-0.6262;MQ=22.22;MQ0=231;MQRankSum=-1.125;QD=0.93;ReadPosRankSum=-1.799;VQSLOD=0.7281;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:74,0:49:61.06:61,0,236	1/1:26,1:19:11.27:148,11,0	./.	./.	0/1:37,1:21:6.48:6,0,16	0/1:31,0:23:47.87:48,0,138	0/1:116,0:73:99:115,0,423	0/1:108,0:49:12.90:13,0,343	0/1:74,0:45:58.79:59,0,266	0/1:76,1:47:99:131,0,431	0/1:36,1:21:0.08:39,0,0	0/1:67,0:44:99:185,0,175	0/1:54,0:37:28.58:29,0,273	0/1:72,0:41:45.86:46,0,163	0/1:58,0:32:17.63:18,0,35	0/1:56,0:45:19.11:19,0,246	0/1:54,1:38:89.09:89,0,182	0/1:52,0:34:99:113,0,294	0/0:55,0:18:8.65:0,9,215	0/0:34,1:19:1.55:0,2,4	0/1:153,0:96:85.65:86,0,240	0/0:43,0:30:2.24:0,2,52	0/1:30,0:16:28.94:29,0,47	0/1:71,0:49:46.40:46,0,56	0/1:43,0:24:9.42:9,0,48	0/1:56,0:38:32.15:32,0,267	0/1:18,1:15:33.31:33,0,76	1/1:11,0:4:8.80:82,9,0
chr10	17570142	.	AAC	A	734.22	PASS	AB=0.959;AC=18;AF=0.346;AN=52;BaseQRankSum=0.826;DP=1425;FS=9.857;HRun=0;HaplotypeScore=318.8860;InbreedingCoeff=-0.4125;MQ=21.40;MQ0=283;MQRankSum=-0.777;QD=0.86;ReadPosRankSum=-1.627;VQSLOD=0.8613;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:56,1:36:16.97:17,0,181	0/1:18,0:11:23.49:23,0,73	./.	./.	0/1:29,2:29:37.57:38,0,80	0/0:13,0:9:0.42:0,0,2	0/0:94,4:62:3.48:0,3,288	0/0:157,0:49:61.03:0,61,650	0/0:41,0:24:9.89:0,10,58	0/1:82,0:40:19.99:20,0,303	0/1:31,1:19:14.20:14,0,90	0/0:55,0:32:26.12:0,26,212	0/1:38,3:31:26.50:26,0,101	0/1:63,6:43:99:175,0,160	0/1:59,1:33:25.16:25,0,136	0/0:52,2:43:12.31:0,12,267	0/1:43,4:36:93.58:94,0,204	0/1:34,1:20:37.37:37,0,116	0/0:65,0:25:9.16:0,9,233	0/1:35,0:26:9.02:9,0,134	0/1:178,5:119:47.91:48,0,222	0/1:40,3:34:99:115,0,217	1/1:19,1:13:4.79:54,5,0	0/0:59,1:41:15.46:0,15,108	0/1:31,0:23:47.07:47,0,125	0/1:49,4:23:99:109,0,104	0/0:20,0:10:11.51:0,12,107	0/1:6,1:5:17.34:32,0,17
chr10	17570153	.	AC	A	4993.65	PASS	AB=0.848;AC=27;AF=0.519;AN=52;BaseQRankSum=-6.841;DP=1243;FS=22.639;HRun=1;HaplotypeScore=251.9321;InbreedingCoeff=-0.8274;MQ=21.60;MQ0=231;MQRankSum=-0.674;QD=4.60;ReadPosRankSum=6.547;VQSLOD=-0.6766;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:42,5:29:85.06:85,0,236	0/1:10,2:9:29.51:30,0,59	./.	./.	0/1:22,4:22:78.46:158,0,78	1/1:9,2:6:1.76:94,2,0	0/1:77,14:54:99:361,0,361	0/0:148,9:73:29.07:0,29,1176	0/1:23,9:18:12.56:309,0,13	0/1:57,12:37:99:262,0,529	0/1:22,5:18:99:131,0,108	0/1:39,9:27:99:122,0,324	0/1:28,11:26:99:350,0,172	0/1:48,11:39:99:262,0,236	0/1:48,7:32:99:190,0,132	0/1:35,11:38:99:360,0,440	0/1:31,8:30:99:253,0,321	0/1:25,4:17:99:145,0,204	0/1:49,4:21:90.70:91,0,364	0/1:15,13:23:99:413,0,148	0/1:146,10:101:99:388,0,459	0/1:29,6:28:99:157,0,228	1/1:13,5:12:1.64:129,2,0	0/1:40,6:35:99:179,0,133	0/1:20,11:22:99:297,0,133	0/1:50,3:21:99:110,0,169	0/1:15,2:10:70.61:81,0,71	0/1:8,1:5:36.38:36,0,38
chr10	17570197	.	A	AAC	493.01	PASS	AB=0.964;AC=16;AF=0.320;AN=50;BaseQRankSum=5.295;DP=1027;FS=17.173;HRun=0;HaplotypeScore=235.1583;InbreedingCoeff=-0.3874;MQ=22.30;MQ0=216;MQRankSum=-2.606;QD=0.79;ReadPosRankSum=-5.831;VQSLOD=-0.4519;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:38,0:24:42.68:43,0,155	./.	./.	./.	0/1:19,0:13:28.29:28,0,77	0/1:15,0:11:55.20:60,0,55	0/1:73,1:41:43.20:43,0,172	0/0:107,0:48:51.16:0,51,657	0/1:36,1:24:13.89:14,0,158	0/0:53,0:34:39.33:0,39,390	0/0:12,0:7:8.62:0,9,92	0/0:38,0:23:5.02:0,5,199	0/1:35,0:21:33.71:34,0,190	0/0:41,0:31:35.58:0,36,403	0/1:41,0:28:16.86:17,0,110	0/1:42,0:32:42.56:43,0,198	0/1:21,0:14:13.86:63,0,14	0/1:27,1:20:97.20:97,0,98	0/0:48,0:8:18.60:0,19,103	0/1:19,0:10:10.73:11,0,66	0/1:143,6:104:99:100,0,270	0/0:35,0:25:26.01:0,26,299	0/1:15,0:11:31.70:38,0,32	0/1:52,0:43:40.31:40,0,98	1/1:22,0:11:0.53:6,1,0	0/0:33,0:14:6.20:0,6,117	0/0:12,0:9:9.07:0,9,130	0/0:2,1:2:2.88:0,3,15
chr10	17570199	.	CACACA	C	152.46	PASS	AB=0.989;AC=11;AF=0.212;AN=52;BaseQRankSum=6.305;DP=1010;FS=14.850;HRun=0;HaplotypeScore=235.3916;InbreedingCoeff=-0.1254;MQ=22.04;MQ0=222;MQRankSum=-1.747;QD=0.50;ReadPosRankSum=-2.300;VQSLOD=0.5108;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,1:24:26.27:0,26,432	0/0:9,0:4:3:0,3,29	./.	./.	0/1:20,0:12:17.07:17,0,87	0/1:15,0:12:18.26:18,0,417	0/0:73,0:40:34.89:0,35,657	0/0:101,0:41:51.17:0,51,1141	0/1:36,2:22:31.63:32,0,377	0/0:51,0:32:33.48:0,33,993	0/0:12,0:7:10.78:0,11,226	0/1:34,1:22:35.30:35,0,481	0/1:33,0:19:26.62:27,0,502	0/1:45,0:30:22.42:22,0,714	0/0:41,0:28:4.31:0,4,558	0/1:43,1:33:11.01:11,0,687	0/0:21,0:14:10.60:0,11,79	0/1:28,0:20:49.53:50,0,411	0/0:51,1:8:3.04:0,3,250	0/1:19,0:10:26.13:26,0,177	0/0:156,3:103:20.85:0,21,852	0/0:35,0:25:28.30:0,28,595	0/0:16,0:11:14.50:0,15,199	0/0:53,1:42:32.01:0,32,627	1/1:21,2:11:8.30:57,8,0	0/0:29,0:11:19.85:0,20,301	0/0:11,0:8:9.89:0,10,344	0/0:3,0:2:3.01:0,3,81
chr10	17570204	.	A	AT	469.79	PASS	AB=0.917;AC=10;AF=0.192;AN=52;BaseQRankSum=3.272;DP=1013;FS=25.655;HRun=0;HaplotypeScore=211.4336;InbreedingCoeff=-0.0734;MQ=21.46;MQ0=250;MQRankSum=-1.807;QD=1.49;ReadPosRankSum=1.332;VQSLOD=0.7531;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:20:30:0,30,371	0/0:13,0:7:3.01:0,3,40	./.	./.	0/0:15,0:10:9.41:0,9,79	0/1:15,1:14:17.95:18,0,268	0/1:50,12:39:99:243,0,360	0/0:91,1:35:54.18:0,54,747	0/0:38,0:26:27.82:0,28,269	0/1:49,3:29:59.67:60,0,481	0/1:9,2:6:36.21:36,0,91	0/0:30,0:23:26.25:0,26,320	0/0:33,1:21:24.58:0,25,364	0/0:38,0:25:47.44:0,47,559	0/0:33,5:26:4.31:0,4,413	0/1:45,0:33:43.69:44,0,490	0/0:22,0:15:20.84:0,21,182	0/1:24,1:19:41.91:42,0,263	0/1:51,2:9:77.42:77,0,110	0/1:18,0:10:4.43:4,0,130	0/0:157,4:96:27.69:0,28,683	0/0:36,0:25:27.13:0,27,363	0/0:15,0:10:15.42:0,15,162	0/0:51,0:37:1.11:0,1,399	1/1:20,1:9:8.86:82,9,0	0/0:29,1:12:11.68:0,12,173	0/0:11,0:7:18.06:0,18,242	0/0:4,0:2:3.01:0,3,42
chr10	17570363	.	ACAAC	A	843.68	PASS	AB=0.978;AC=22;AF=0.393;AN=56;BaseQRankSum=3.410;DP=977;FS=3.145;HRun=0;HaplotypeScore=272.0194;InbreedingCoeff=-0.5023;MQ=21.54;MQ0=153;MQRankSum=-0.358;QD=1.16;ReadPosRankSum=-0.020;VQSLOD=2.5715;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:42,1:28:86.41:86,0,95	0/1:16,0:13:22.55:23,0,58	0/0:20,0:1:2.50:0,2,9	0/1:24,0:3:29.09:29,0,45	0/1:22,1:18:19.73:89,0,20	0/1:22,0:15:2.95:3,0,105	0/1:83,3:53:46.62:47,0,340	0/0:83,0:33:35.01:0,35,324	0/1:30,0:19:48.04:48,0,142	0/0:66,0:39:80.47:0,80,680	0/1:25,0:17:28.58:29,0,179	0/0:33,0:27:3.58:0,4,202	0/0:20,0:14:23.59:0,24,203	0/1:25,0:16:22.17:22,0,79	0/1:40,0:27:35.15:35,0,145	0/1:30,0:23:51.69:52,0,181	1/1:19,1:11:9.29:186,9,0	0/1:19,0:13:20.95:133,0,21	0/1:24,0:7:13.06:13,0,103	0/1:27,0:21:18.36:52,0,18	0/1:121,4:78:23.74:24,0,168	0/1:22,0:19:9.11:68,0,9	0/0:18,0:13:3.38:0,3,44	0/1:31,0:27:29.80:30,0,83	0/1:23,0:18:3.05:3,0,64	0/1:42,0:23:21.14:21,0,372	0/1:16,0:14:3.04:3,0,107	0/0:8,0:8:2.69:0,3,66
chr10	17570364	.	CA	C	1306.45	PASS	AB=0.915;AC=24;AF=0.429;AN=56;BaseQRankSum=2.118;DP=947;FS=104.593;HRun=2;HaplotypeScore=253.1759;InbreedingCoeff=-0.7843;MQ=21.40;MQ0=147;MQRankSum=1.050;QD=1.52;ReadPosRankSum=2.172;VQSLOD=0.1825;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:38,5:28:90.89:116,0,91	0/1:15,1:13:22.39:25,0,22	0/0:20,1:1:2.97:0,3,20	0/0:26,0:3:6.36:0,6,61	0/0:21,1:17:2.34:0,2,60	0/1:21,1:15:64.75:76,0,65	0/1:83,2:52:55.73:56,0,264	0/1:79,1:31:89.11:89,0,140	0/1:26,1:18:14.96:15,0,120	0/1:60,4:38:99:170,0,329	0/1:23,1:16:25.97:26,0,82	0/1:31,0:26:22.88:23,0,204	0/1:18,1:14:79.94:80,0,134	0/1:25,2:16:17.39:17,0,75	0/1:36,2:24:69.79:70,0,157	0/1:28,2:23:95.55:128,0,96	0/1:19,0:11:4.08:4,0,12	0/1:20,0:13:37.56:38,0,100	0/0:19,0:6:6.85:0,7,57	0/1:20,5:19:50.55:69,0,51	0/1:120,4:76:59.88:60,0,123	0/1:14,7:18:20.89:118,0,21	0/1:13,4:12:18.11:44,0,18	0/1:26,3:26:48.72:49,0,145	0/1:20,3:17:24.43:24,0,88	0/1:39,2:22:40.90:41,0,284	0/1:16,0:14:38.30:38,0,83	0/1:4,4:8:25.77:81,0,26
chr10	17570375	.	CA	C	416.67	PASS	AB=0.922;AC=19;AF=0.339;AN=56;BaseQRankSum=-0.076;DP=792;FS=96.069;HRun=2;HaplotypeScore=229.6245;InbreedingCoeff=-0.3572;MQ=24.77;MQ0=105;MQRankSum=1.542;QD=0.91;ReadPosRankSum=-1.152;VQSLOD=-0.2377;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:33,3:23:0.71:1,0,137	0/1:8,3:10:33.85:48,0,34	0/0:43,0:3:8.98:0,9,102	0/0:48,0:8:2.35:0,2,101	0/1:12,4:13:7.37:46,0,7	0/0:17,1:12:5.14:0,5,64	0/1:66,6:43:37.83:38,0,314	0/1:46,1:18:43.24:43,0,57	0/0:24,0:16:8.61:0,9,151	0/1:44,1:28:41.47:41,0,262	0/1:13,4:11:35.28:37,0,35	0/1:26,0:24:5.66:6,0,225	0/1:16,0:13:34.33:34,0,75	0/1:18,3:13:13.85:14,0,96	0/1:27,1:17:2.13:2,0,47	0/1:19,4:19:60.70:61,0,138	0/0:15,0:10:17.81:0,18,96	0/1:17,0:11:14.66:15,0,111	0/0:17,0:8:12.58:0,13,89	0/0:18,1:13:10.41:0,10,82	0/0:98,7:68:12.89:0,13,84	0/1:17,0:16:5.99:23,0,6	0/1:13,1:11:16.47:29,0,16	0/0:27,0:26:8.12:0,8,160	0/0:15,0:10:5.36:0,5,30	0/1:24,3:17:66.71:67,0,103	0/1:9,0:9:18.01:18,0,48	1/1:4,2:6:3.57:44,4,0
chr10	17570376	.	AAC	A	623.99	PASS	AB=0.969;AC=33;AF=0.589;AN=56;BaseQRankSum=2.029;DP=772;FS=8.299;HRun=0;HaplotypeScore=229.9068;InbreedingCoeff=-0.1985;MQ=24.85;MQ0=102;MQRankSum=4.424;QD=1.01;ReadPosRankSum=2.530;VQSLOD=1.5954;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:37,0:23:18.33:18,0,22	0/1:11,0:9:5.15:5,0,29	0/0:45,1:3:8.99:0,9,89	0/0:49,0:8:0.74:0,1,108	0/0:13,0:12:0.81:0,1,30	1/1:11,4:11:5:53,5,0	0/1:68,2:43:18.81:40,0,19	0/0:43,0:17:0:0,0,0	0/1:21,0:15:5.27:5,0,11	0/1:37,0:28:32.77:33,0,118	0/1:14,0:9:2.33:6,0,2	0/1:25,3:25:18.57:19,0,20	0/1:11,3:13:13.99:18,0,14	0/1:21,0:13:5.72:6,0,13	0/1:23,4:16:5.81:36,0,6	1/1:16,5:18:4.26:67,4,0	0/1:15,0:10:1.36:20,0,1	0/1:17,1:12:28.95:45,0,29	1/1:17,0:7:6.27:53,6,0	1/1:15,3:14:1.31:26,1,0	0/1:97,0:66:4.65:5,0,23	1/1:13,4:15:12.88:121,13,0	1/1:6,7:10:6.14:28,6,0	1/1:25,3:27:0.11:64,0,0	1/1:10,5:11:5.91:47,6,0	0/1:25,0:16:18.79:19,0,38	0/1:9,0:9:10.35:10,0,42	1/1:4,0:6:6.13:24,6,0
chr10	17570393	.	GCACA	G	1084.61	PASS	AB=0.946;AC=22;AF=0.393;AN=56;BaseQRankSum=2.265;DP=599;FS=3.157;HRun=0;HaplotypeScore=191.5608;InbreedingCoeff=0.1631;MQ=31.87;MQ0=53;MQRankSum=0.247;QD=4.54;ReadPosRankSum=2.484;VQSLOD=2.8143;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:13:9.41:9,0,12	0/1:6,2:6:24.07:25,0,24	0/0:72,0:8:3.49:0,3,129	0/0:71,0:8:12.71:0,13,185	1/1:7,4:9:5.80:39,6,0	0/0:15,0:11:10.52:0,11,207	0/1:40,0:27:6.53:7,0,255	1/1:11,0:7:2.42:14,2,0	0/1:11,0:7:3.84:4,0,96	0/1:14,12:17:99:434,0,133	1/1:1,3:4:11.49:69,11,0	0/0:17,0:16:23.99:0,24,328	0/1:9,0:7:2.45:2,0,134	0/0:15,0:12:9.09:0,9,158	0/0:17,0:12:1.26:0,1,281	0/0:19,0:17:17.38:0,17,362	0/1:14,0:10:4.46:4,0,15	0/1:20,0:15:19.18:19,0,202	0/0:14,0:11:16.18:0,16,364	0/1:15,0:10:3.24:3,0,44	0/0:65,0:43:7.45:0,7,173	0/0:15,0:14:20.18:0,20,315	0/0:9,0:9:12:0,12,199	0/0:28,0:25:5.48:0,5,33	0/1:15,0:12:5.77:6,0,82	1/1:9,8:11:17.75:274,18,0	1/1:5,4:9:0.47:180,0,0	1/1:2,2:4:9.03:158,9,0
chr10	17570397	.	A	ACAC	148.42	PASS	AB=0.994;AC=17;AF=0.304;AN=56;BaseQRankSum=4.755;DP=672;FS=37.388;HRun=0;HaplotypeScore=228.5698;InbreedingCoeff=-0.0701;MQ=31.00;MQ0=65;MQRankSum=-0.866;QD=0.38;ReadPosRankSum=-2.651;VQSLOD=0.8113;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:15:13.15:13,0,31	0/0:9,0:6:2.14:0,2,23	0/0:70,0:8:17:0,17,172	0/1:76,0:9:9.67:10,0,160	1/1:13,0:11:3.16:9,3,0	0/0:16,0:12:17.82:0,18,241	0/1:46,0:29:21:21,0,258	1/1:13,0:8:0.94:2,1,0	0/1:13,0:9:48.04:48,0,98	0/0:32,0:22:26.87:0,27,358	1/1:4,0:4:5.75:15,6,0	0/0:17,0:16:27.65:0,28,338	0/0:10,0:7:10.59:0,11,141	0/0:15,0:13:20.90:0,21,227	0/0:23,0:14:24.80:0,25,296	0/0:20,0:18:17.25:0,17,307	0/1:15,0:11:13.72:14,0,15	0/1:22,0:16:55.73:56,0,122	0/1:16,0:11:21.45:21,0,235	0/1:15,0:11:3.24:3,0,68	0/1:76,4:58:40.01:40,0,153	0/0:17,0:15:19.37:0,19,223	0/0:9,0:9:12.28:0,12,136	0/1:33,0:28:9:9,0,54	0/0:19,0:16:5.12:0,5,96	0/1:19,0:12:36.77:37,0,87	0/0:11,0:9:11.01:0,11,111	0/0:6,0:5:11.64:0,12,89
chr10	17570429	.	AC	A	252.36	PASS	AB=0.954;AC=13;AF=0.232;AN=56;BaseQRankSum=6.317;DP=871;FS=95.244;HRun=1;HaplotypeScore=205.1122;InbreedingCoeff=-0.2298;MQ=21.77;MQ0=160;MQRankSum=-1.004;QD=0.60;ReadPosRankSum=0.642;VQSLOD=-0.3530;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:20:22.68:23,0,73	0/0:8,0:5:6.02:0,6,84	0/0:40,0:1:3.01:0,3,39	0/0:54,0:2:6.02:0,6,96	0/0:16,0:8:2.49:0,2,47	0/0:22,1:14:10.80:0,11,115	0/0:65,2:43:19.32:0,19,603	0/0:33,0:19:6.64:0,7,271	0/0:22,0:14:14.34:0,14,162	0/0:49,1:29:36.80:0,37,777	1/1:12,0:8:0.47:1,0,0	0/0:29,0:15:11.17:0,11,119	0/0:21,0:12:8.27:0,8,93	0/1:27,1:16:14.64:15,0,163	0/1:27,0:14:25.02:25,0,95	0/1:32,1:20:48.62:49,0,243	0/1:16,5:14:44.77:45,0,72	0/1:28,1:21:79.80:80,0,346	0/0:22,0:8:14.88:0,15,170	0/1:21,1:17:7.48:7,0,122	0/1:123,3:87:92.42:92,0,257	0/1:18,0:14:17.58:18,0,67	0/0:20,0:14:5.91:0,6,95	0/1:42,2:32:10.28:32,0,10	0/1:21,1:18:4.08:4,0,75	0/0:26,1:14:29.40:0,29,296	0/0:12,0:10:15.01:0,15,159	0/0:7,0:6:14.88:0,15,193
chr10	17570430	.	CA	C	92.12	PASS	AB=0.987;AC=11;AF=0.196;AN=56;BaseQRankSum=6.206;DP=861;FS=92.589;HRun=1;HaplotypeScore=202.9857;InbreedingCoeff=-0.1510;MQ=21.84;MQ0=159;MQRankSum=-0.387;QD=0.25;ReadPosRankSum=2.044;VQSLOD=-0.4528;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:20:0.91:1,0,69	0/0:8,0:5:6.02:0,6,84	0/0:37,0:1:3.01:0,3,39	0/0:51,0:2:6.02:0,6,96	0/0:16,0:8:2.60:0,3,48	0/0:24,0:14:11.20:0,11,119	0/0:67,0:42:24.01:0,24,597	0/0:32,0:19:23.49:0,23,293	0/0:22,0:14:11.57:0,12,147	0/0:48,1:29:36.19:0,36,755	1/1:12,0:8:1.35:3,1,0	0/0:26,0:13:10.97:0,11,126	0/0:20,0:11:7.60:0,8,90	0/0:28,0:16:3.13:0,3,166	0/1:27,0:14:7.23:7,0,95	0/1:32,0:20:18.17:18,0,236	0/1:21,0:14:15.33:15,0,48	0/1:28,0:21:71.66:72,0,348	0/0:22,0:8:14.88:0,15,171	0/0:22,0:17:8.26:0,8,133	0/1:125,4:88:76.28:76,0,225	0/1:17,1:14:2.99:3,0,64	0/0:20,0:14:5.90:0,6,95	0/1:44,0:32:7.12:7,0,21	0/1:23,0:18:12.06:12,0,77	0/0:26,0:14:29.35:0,29,289	0/0:12,0:10:11.92:0,12,153	0/0:6,1:6:14.88:0,15,192
chr10	17570431	.	AC	A	189.31	PASS	AB=0.980;AC=10;AF=0.179;AN=56;BaseQRankSum=6.515;DP=855;FS=84.276;HRun=1;HaplotypeScore=203.5325;InbreedingCoeff=-0.1563;MQ=21.91;MQ0=158;MQRankSum=-1.976;QD=0.56;ReadPosRankSum=2.073;VQSLOD=-0.7442;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:31,2:20:39.06:57,0,39	0/0:7,0:5:6.01:0,6,76	0/0:36,0:1:3.01:0,3,39	0/0:48,0:2:6.02:0,6,96	0/0:15,1:8:2.49:0,2,47	0/0:22,0:14:0.97:0,1,87	0/0:67,0:42:32.44:0,32,606	0/0:33,0:17:26.67:0,27,306	0/0:21,0:14:8.59:0,9,115	0/0:46,1:29:47.85:0,48,684	1/1:12,0:8:1.36:3,1,0	0/0:26,0:12:9.05:0,9,119	0/0:20,0:11:5.87:0,6,85	0/0:27,0:16:12.40:0,12,139	0/1:27,0:14:3.67:4,0,87	0/0:30,2:20:3.64:0,4,186	0/1:21,0:14:46:57,0,46	0/1:30,0:21:41.10:41,0,337	0/0:22,0:8:14.83:0,15,167	0/0:20,0:17:10.80:0,11,136	0/1:124,3:88:99:115,0,176	0/1:18,0:14:20.72:21,0,43	0/0:20,0:14:5.83:0,6,95	0/1:44,0:33:7.91:8,0,27	0/1:22,1:19:9.59:10,0,76	0/0:24,1:14:26.02:0,26,248	0/0:12,0:10:15.08:0,15,143	0/0:7,0:6:14.88:0,15,173
chr10	17570433	.	ACG	A	1403.96	PASS	AB=0.894;AC=28;AF=0.500;AN=56;BaseQRankSum=6.934;DP=838;FS=2.649;HRun=0;HaplotypeScore=193.9864;InbreedingCoeff=-0.5553;MQ=21.98;MQ0=161;MQRankSum=-1.205;QD=1.88;ReadPosRankSum=0.463;VQSLOD=2.8534;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:31,2:20:2.37:67,2,0	0/1:5,0:4:14.32:14,0,35	1/1:34,0:1:2.92:17,3,0	0/0:44,0:2:6.02:0,6,71	0/0:13,3:8:2.92:0,3,42	0/1:20,4:15:24.39:24,0,81	0/1:59,4:40:17.14:17,0,539	0/1:29,1:17:19.17:19,0,174	0/1:23,1:15:3.83:4,0,98	0/1:40,5:27:99:292,0,114	0/0:11,2:9:0.75:0,1,3	0/1:28,1:14:18.99:19,0,43	0/1:18,2:11:19.55:20,0,40	0/1:25,4:16:75.23:89,0,75	0/1:22,3:15:17:17,0,120	0/1:24,5:18:90.71:96,0,91	0/1:14,3:13:18.59:100,0,19	0/1:26,1:21:99:127,0,155	0/1:24,0:8:53.55:54,0,80	0/1:21,1:17:25.25:25,0,68	0/1:111,10:87:57.69:107,0,58	1/1:11,5:13:14.71:108,15,0	0/0:17,3:14:5.79:0,6,81	1/1:38,4:32:1.09:14,1,0	0/1:20,3:18:11.61:12,0,70	0/1:20,5:12:78.65:164,0,79	0/1:9,3:10:23.24:93,0,23	0/1:6,1:6:47.28:54,0,47
chr10	17570434	.	CG	C	249.85	PASS	AB=0.931;AC=13;AF=0.232;AN=56;BaseQRankSum=6.531;DP=808;FS=3.056;HRun=1;HaplotypeScore=183.9635;InbreedingCoeff=-0.2602;MQ=21.83;MQ0=159;MQRankSum=-0.381;QD=0.65;ReadPosRankSum=2.211;VQSLOD=-0.6992;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:28,4:20:22.33:93,0,22	0/0:5,0:4:5.93:0,6,60	0/0:32,0:1:2.98:0,3,21	0/0:44,0:2:6.02:0,6,80	0/0:15,0:7:2.49:0,2,45	0/1:22,1:14:34.97:35,0,81	0/0:60,3:40:6.37:0,6,521	0/0:32,0:17:26.20:0,26,301	0/0:23,0:14:10.32:0,10,150	0/0:40,0:24:30.65:0,31,367	0/0:11,1:9:1.34:0,1,18	0/0:24,1:11:8.56:0,9,117	0/1:14,3:10:16.63:17,0,68	0/0:26,3:16:10.95:0,11,123	0/1:21,2:13:27.83:28,0,101	0/1:28,1:18:23.86:24,0,143	0/1:18,0:12:47.10:49,0,47	0/1:26,1:19:39.04:39,0,246	0/0:23,0:7:7.47:0,7,128	0/0:22,0:17:10.74:0,11,113	0/1:109,8:83:30.60:31,0,156	1/1:15,2:13:3.09:39,3,0	0/0:18,2:14:5.92:0,6,89	0/1:37,4:31:8.53:9,0,20	0/1:21,0:16:17.12:17,0,104	0/0:22,3:12:2.06:0,2,118	0/1:9,1:8:12.20:12,0,81	0/0:6,0:5:4.58:0,5,80
chr10	17570462	.	C	CA	336.90	PASS	AB=0.993;AC=17;AF=0.327;AN=52;BaseQRankSum=6.753;DP=973;FS=103.612;HRun=1;HaplotypeScore=209.3084;InbreedingCoeff=-0.3512;MQ=20.89;MQ0=210;MQRankSum=-1.967;QD=0.52;ReadPosRankSum=-0.544;VQSLOD=-0.6143;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,1:25:13.47:0,13,208	0/0:14,0:11:13.64:0,14,108	./.	./.	0/0:18,0:8:2.58:0,3,38	0/1:26,0:11:13.15:13,0,77	0/1:82,0:50:64.25:64,0,283	0/0:32,0:13:29.46:0,29,349	0/0:30,0:17:14.49:0,14,149	0/1:48,0:25:7.26:7,0,375	0/1:12,0:7:18.17:39,0,18	0/0:33,0:14:0.40:0,0,126	0/0:19,0:11:6.39:0,6,110	0/1:43,1:22:12.06:12,0,42	0/0:33,0:16:10.58:0,11,114	0/1:24,0:12:9.71:10,0,27	0/1:28,1:23:57.09:57,0,204	0/1:30,0:21:31.18:31,0,303	0/0:36,0:7:14.53:0,15,165	0/1:31,0:23:32.54:33,0,99	0/1:139,1:95:10.23:10,0,132	0/1:30,0:18:20.03:25,0,20	0/1:25,0:16:26.57:27,0,66	1/1:45,0:26:9.37:90,9,0	0/1:29,0:17:5.43:5,0,193	0/1:37,1:16:44.41:44,0,249	0/0:10,0:7:10.64:0,11,101	0/1:7,0:5:16.88:17,0,102
chr10	17570463	.	AC	A	584.58	PASS	AB=0.961;AC=19;AF=0.365;AN=52;BaseQRankSum=5.000;DP=973;FS=102.068;HRun=1;HaplotypeScore=204.7939;InbreedingCoeff=-0.4386;MQ=20.88;MQ0=206;MQRankSum=-2.643;QD=0.83;ReadPosRankSum=-1.003;VQSLOD=-0.4056;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:40,2:25:10.40:10,0,228	0/1:13,0:11:27.70:28,0,62	./.	./.	0/0:18,0:8:2.68:0,3,44	0/1:23,3:11:61.01:61,0,114	0/1:81,3:52:72.38:72,0,397	0/0:32,0:14:30.03:0,30,377	0/0:29,1:17:14.68:0,15,213	0/1:44,1:22:20.90:21,0,460	0/1:11,1:7:14.22:15,0,14	0/1:32,1:14:23.87:24,0,148	0/0:19,1:11:14.62:0,15,160	0/1:43,2:22:32.42:32,0,39	0/0:33,0:16:11.26:0,11,159	0/1:26,0:12:10.19:10,0,25	0/1:28,1:24:37.44:37,0,221	0/1:28,2:22:49.56:50,0,370	0/0:38,0:8:14.54:0,15,194	0/1:29,2:23:25.44:25,0,118	0/1:140,5:92:99:104,0,175	0/1:28,2:18:29.97:51,0,30	0/1:24,1:16:69.46:69,0,74	1/1:41,3:25:6.76:91,7,0	0/0:28,1:17:20.18:0,20,262	0/1:36,1:16:26.68:27,0,331	0/0:10,0:7:12.21:0,12,140	0/1:7,0:5:9.23:9,0,106
chr10	17570486	.	ACG	A	607.15	PASS	AB=0.947;AC=22;AF=0.407;AN=54;BaseQRankSum=5.555;DP=800;FS=20.569;HRun=0;HaplotypeScore=153.0127;InbreedingCoeff=-0.3703;MQ=19.68;MQ0=164;MQRankSum=-1.096;QD=1.14;ReadPosRankSum=1.409;VQSLOD=1.6066;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:40,0:21:21.44:21,0,138	0/0:11,1:9:5.79:0,6,96	./.	0/0:40,0:1:3.01:0,3,30	0/1:17,1:9:1.70:2,0,31	0/0:21,0:10:2.58:0,3,40	0/1:51,0:26:26.24:26,0,112	0/1:28,0:11:11.96:12,0,102	0/1:24,2:17:35.68:36,0,39	0/1:33,5:19:99:101,0,158	0/0:8,0:3:0.47:0,0,1	0/1:21,1:11:5.91:6,0,88	0/0:17,1:9:3.54:0,4,19	0/1:30,1:18:11.87:46,0,12	0/1:30,1:16:19.51:20,0,24	0/0:14,0:6:2.98:0,3,22	0/1:23,1:19:25.94:110,0,26	0/1:21,0:17:15.69:80,0,16	0/1:30,0:8:38.87:39,0,63	1/1:16,0:12:0.88:20,1,0	0/0:110,1:70:11.05:0,11,127	0/1:24,0:16:9.05:9,0,31	0/1:18,2:12:14.52:26,0,15	0/1:39,0:23:9.81:32,0,10	1/1:30,1:15:1.68:23,2,0	0/1:23,1:9:19.45:87,0,19	0/0:7,2:4:1.82:0,2,5	1/1:7,1:4:8.72:53,9,0
chr10	17570522	.	ACAC	A	2074.22	PASS	AB=0.951;AC=32;AF=0.640;AN=50;BaseQRankSum=2.917;DP=767;FS=4.337;HRun=0;HaplotypeScore=161.3001;InbreedingCoeff=-0.4471;MQ=20.32;MQ0=173;MQRankSum=-1.255;QD=2.89;ReadPosRankSum=2.289;VQSLOD=2.6473;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:15:18.91:87,0,19	./.	./.	./.	0/0:24,3:18:5.85:0,6,34	0/1:26,5:18:41.26:41,0,78	0/1:46,4:32:67.83:142,0,68	1/1:24,1:6:11.52:127,12,0	0/1:28,0:17:11.54:12,0,50	0/1:44,4:24:97.73:263,0,98	1/1:11,1:6:2.94:18,3,0	0/1:34,0:18:57.07:81,0,57	0/1:25,1:17:64.24:64,0,122	1/1:31,0:21:16.83:138,17,0	1/1:19,4:13:9.87:74,10,0	0/1:17,1:9:22.23:42,0,22	0/1:23,0:10:16.61:156,0,17	0/1:21,5:16:33.89:209,0,34	1/1:37,0:7:13.37:119,13,0	0/1:23,0:15:16.58:27,0,17	0/1:92,0:54:20.09:20,0,47	1/1:21,0:13:10.47:71,10,0	0/1:22,0:17:13.13:13,0,29	1/1:31,0:20:9.81:86,10,0	0/1:23,3:16:28.75:29,0,47	0/1:31,4:23:99:263,0,196	1/1:7,4:5:4.92:63,5,0	0/1:9,0:6:49.28:78,0,49
chr10	17570524	.	AC	A	1956.67	PASS	AB=0.830;AC=32;AF=0.640;AN=50;BaseQRankSum=3.210;DP=760;FS=6.494;HRun=2;HaplotypeScore=155.8636;InbreedingCoeff=-0.4848;MQ=20.46;MQ0=170;MQRankSum=-0.893;QD=2.74;ReadPosRankSum=2.621;VQSLOD=0.0776;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:22,5:14:28.73:86,0,29	./.	./.	./.	0/0:19,8:18:6.01:0,6,62	0/1:21,10:17:31.05:31,0,80	0/1:43,9:33:61.30:150,0,61	1/1:22,2:8:7.31:84,7,0	0/1:19,9:17:31.38:31,0,84	0/1:43,5:24:99:193,0,160	1/1:9,3:6:3:26,3,0	0/1:25,10:19:57.67:58,0,86	0/1:17,9:17:32.97:33,0,121	1/1:22,10:22:17.73:167,18,0	1/1:18,4:12:11.09:77,11,0	0/1:15,4:10:5.64:86,0,6	0/1:15,7:10:26.21:104,0,26	0/1:21,6:17:17.66:170,0,18	1/1:33,2:7:2.77:116,3,0	0/1:17,5:15:10.37:36,0,10	0/1:71,16:51:21.37:21,0,49	1/1:17,5:14:1.19:88,1,0	0/1:19,3:17:43.14:43,0,55	1/1:21,9:20:10.05:107,10,0	0/1:25,2:16:35.54:41,0,36	0/1:30,4:21:99:234,0,149	1/1:8,3:5:5.11:53,5,0	0/1:8,1:6:31.28:67,0,31
chr10	17570525	.	C	CA	1659.20	PASS	AB=0.942;AC=31;AF=0.596;AN=52;BaseQRankSum=3.542;DP=775;FS=3.112;HRun=1;HaplotypeScore=174.5096;InbreedingCoeff=-0.4625;MQ=20.81;MQ0=166;MQRankSum=-1.054;QD=2.29;ReadPosRankSum=2.462;VQSLOD=-0.2247;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:25,1:15:25.14:82,0,25	0/0:15,0:6:0.47:0,0,1	./.	./.	0/0:27,1:19:6.01:0,6,76	0/1:30,1:18:33.67:34,0,77	0/1:47,5:34:51.33:160,0,51	1/1:32,0:13:6.05:41,6,0	0/1:25,0:16:10.58:11,0,103	0/1:45,1:26:99:138,0,203	1/1:12,0:6:3.01:30,3,0	0/1:36,1:21:82.83:83,0,100	0/1:26,0:17:32.41:32,0,123	1/1:27,2:21:17.52:124,18,0	1/1:22,1:13:11.41:113,11,0	1/1:20,0:11:2.14:66,2,0	0/1:19,3:10:25.60:73,0,26	0/1:25,2:17:18.89:123,0,19	0/1:38,0:10:3.46:120,0,3	0/1:24,0:16:11.95:34,0,12	0/1:81,4:49:23.91:24,0,57	0/1:21,0:13:13.06:41,0,13	0/1:19,1:17:12.09:12,0,72	1/1:31,0:20:9.97:104,10,0	0/1:26,1:16:31.34:77,0,31	0/1:35,3:22:99:239,0,145	1/1:10,1:5:1.19:5,1,0	0/1:8,0:6:28.76:37,0,29
chr10	17570530	.	C	CA	1759.45	PASS	AB=0.950;AC=30;AF=0.577;AN=52;BaseQRankSum=1.098;DP=771;FS=6.155;HRun=1;HaplotypeScore=171.2473;InbreedingCoeff=-0.4239;MQ=22.03;MQ0=150;MQRankSum=-0.699;QD=2.42;ReadPosRankSum=1.827;VQSLOD=-0.3642;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:25,3:16:2.97:47,3,0	0/0:11,0:7:3.06:0,3,8	./.	./.	0/0:24,0:17:8.15:0,8,47	0/1:32,0:19:42.96:43,0,69	0/1:55,0:36:27.79:94,0,28	1/1:34,1:15:21.62:179,22,0	0/1:24,2:14:42.11:42,0,71	0/1:51,2:27:69.77:331,0,70	1/1:11,0:5:2.90:16,3,0	0/1:33,6:23:44.08:169,0,44	0/1:23,1:16:57.95:104,0,58	0/1:27,3:22:7.55:123,0,8	0/1:19,1:10:2.79:55,0,3	0/1:16,0:10:7.13:7,0,45	0/1:20,0:11:12.66:72,0,13	0/1:25,0:17:56.13:77,0,56	1/1:36,0:15:15.31:192,15,0	0/1:27,1:21:5.59:42,0,6	0/1:87,1:52:25.15:25,0,48	0/1:17,3:12:2.16:34,0,2	0/1:18,2:16:10.25:10,0,23	1/1:26,3:18:0.14:41,0,0	0/1:24,2:16:1.72:2,0,25	0/1:37,0:23:99:119,0,179	1/1:12,0:6:2.58:16,3,0	0/1:10,0:7:24.97:60,0,25
chr10	17571277	.	T	TCTC	40522.61	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-7.427;DP=778;FS=6.164;HRun=0;HaplotypeScore=97.1206;InbreedingCoeff=0.9992;MQ=80.54;MQ0=0;MQRankSum=-10.301;QD=55.36;ReadPosRankSum=5.762;VQSLOD=6.8416;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,43:46:99:2648,117,0	1/1:1,9:10:27.05:541,27,0	0/0:26,0:26:65.34:0,65,1085	0/0:20,0:20:44.97:0,45,734	1/1:1,25:26:60.21:1350,60,0	1/1:1,17:19:48.16:1064,48,0	1/1:2,22:25:51.17:1101,51,0	1/1:3,13:18:54.16:1098,54,0	1/1:2,34:38:87.25:1882,87,0	1/1:3,41:47:99:2739,126,0	1/1:1,26:27:66.22:1424,66,0	1/1:4,33:39:93.24:1919,93,0	1/1:1,23:26:66.23:1453,66,0	1/1:1,44:45:99:2637,120,0	1/1:2,27:30:75.25:1618,75,0	1/1:4,37:41:99:2378,105,0	1/1:0,28:28:69.24:1586,69,0	1/1:1,25:26:63.17:1402,63,0	1/1:8,25:35:99:2048,99,0	1/1:1,23:25:72.20:1526,72,0	1/1:0,30:35:72.25:1585,72,0	1/1:2,18:21:51.17:1111,51,0	1/1:1,23:24:63.22:1418,63,0	1/1:1,24:25:72.25:1643,72,0	1/1:1,18:21:48.12:1003,48,0	1/1:2,17:20:54.17:1168,54,0	1/1:1,23:25:66.20:1488,66,0	1/1:0,10:10:30.10:691,30,0
chr10	17576277	.	CG	C	932.73	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-6.845;DP=389;FS=8.069;HRun=7;HaplotypeScore=86.9656;InbreedingCoeff=0.8166;MQ=56.18;MQ0=35;MQRankSum=-1.944;QD=10.36;ReadPosRankSum=2.839;VQSLOD=1.5588;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:18:37.88:0,38,209	1/1:2,5:7:15.03:152,15,0	0/0:47,0:5:8.30:0,8,50	0/0:58,2:10:23.52:0,24,170	1/1:3,5:9:8.04:64,8,0	0/0:8,0:8:2.88:0,3,15	0/0:10,0:12:11.23:0,11,56	0/0:9,0:9:17.51:0,18,104	0/0:6,0:10:21.86:0,22,106	1/1:5,7:12:24.40:199,24,0	1/1:1,5:6:14.84:124,15,0	0/0:7,0:18:26.75:0,27,142	0/0:6,0:13:22.67:0,23,127	0/0:4,0:12:28.84:0,29,158	0/0:7,0:10:19.97:0,20,122	0/0:3,0:4:11.54:0,12,61	1/1:6,16:20:15.02:152,15,0	0/0:8,0:10:19.43:0,19,101	0/0:6,0:11:23.17:0,23,136	0/0:7,0:8:8.89:0,9,58	0/0:2,0:4:0.55:0,1,11	0/0:3,0:4:8.84:0,9,66	0/0:6,0:6:11.78:0,12,76	0/0:4,0:15:34.50:0,35,196	0/0:1,0:3:2.80:0,3,13	1/1:3,6:9:15.03:152,15,0	1/1:4,14:20:26.69:221,27,0	1/1:1,3:4:6.01:61,6,0
chr10	17576288	.	AAAAAAG	A	767.65	PASS	AB=0.944;AC=14;AF=0.250;AN=56;BaseQRankSum=3.834;DP=404;FS=3.619;HRun=0;HaplotypeScore=93.6584;InbreedingCoeff=0.5029;MQ=51.57;MQ0=47;MQRankSum=-4.867;QD=15.35;ReadPosRankSum=3.837;VQSLOD=2.3209;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:18:49.40:0,49,1326	0/0:8,0:8:21.07:0,21,465	0/0:51,0:5:3.43:0,3,20	0/0:65,0:10:11.69:0,12,214	0/0:15,0:13:30.10:0,30,615	1/1:3,0:3:6.02:95,6,0	1/1:2,2:4:9.03:154,9,0	0/0:21,0:12:17.06:0,17,557	0/1:7,1:7:23.85:103,0,24	0/0:14,0:14:31:0,31,631	0/0:6,0:6:16.60:0,17,250	0/0:15,0:15:1.41:0,1,617	0/1:9,0:9:6.22:6,0,512	0/0:10,0:10:25.35:0,25,613	1/1:3,2:5:11.84:98,12,0	1/1:4,1:4:12.04:201,12,0	0/0:25,0:23:48.07:0,48,1039	0/1:7,1:7:5.55:249,0,6	0/0:14,0:10:23.63:0,24,568	0/0:12,0:10:13.78:0,14,192	0/0:5,0:5:9.03:0,9,167	0/0:4,0:4:6.02:0,6,102	0/1:6,0:4:3.94:4,0,17	0/0:19,0:16:17.75:0,18,1015	1/1:2,0:2:2.94:18,3,0	0/0:13,0:13:34:0,34,870	0/0:23,0:23:45.04:0,45,993	0/0:15,0:14:33.11:0,33,648
chr10	17577965	.	CTG	C	5129.08	PASS	AB=0.903;AC=35;AF=0.648;AN=54;BaseQRankSum=-6.828;DP=797;FS=0.665;HRun=0;HaplotypeScore=225.5947;InbreedingCoeff=0.5915;MQ=46.50;MQ0=19;MQRankSum=4.629;QD=10.94;ReadPosRankSum=4.388;VQSLOD=4.1365;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:2.02:0,2,22	1/1:8,8:18:21.06:242,21,0	0/0:41,0:7:0:0,0,0	./.	1/1:7,10:18:18.05:208,18,0	1/1:4,0:17:22.73:112,23,0	1/1:16,0:29:1.47:20,1,0	0/1:25,3:27:30.54:144,0,31	0/0:23,0:22:1.71:0,2,11	1/1:16,23:39:55.99:750,56,0	1/1:6,9:14:15.04:173,15,0	0/0:50,0:49:6.06:0,6,220	0/0:37,0:37:18.96:0,19,223	0/0:34,0:33:1.44:0,1,16	1/1:5,0:16:16.69:79,17,0	1/1:7,0:18:31.25:154,31,0	1/1:12,25:37:81.22:922,81,0	1/1:15,0:31:47.09:235,47,0	1/1:14,3:16:14.86:143,15,0	1/1:4,6:9:3:35,3,0	1/1:72,10:81:12.15:242,12,0	0/0:15,0:15:0:0,0,0	0/0:18,0:18:0:0,0,0	0/0:34,0:34:7.63:0,8,30	1/1:16,0:28:18.53:114,19,0	1/1:8,21:29:60.13:659,60,0	1/1:4,13:17:36:416,36,0	1/1:5,14:19:42.12:482,42,0
chr10	17577978	.	T	TGCGTGTGTGC	5951.71	PASS	AB=0.947;AC=21;AF=0.375;AN=56;BaseQRankSum=-8.926;DP=867;FS=27.959;HRun=0;HaplotypeScore=337.7402;InbreedingCoeff=0.2838;MQ=46.26;MQ0=28;MQRankSum=0.251;QD=12.35;ReadPosRankSum=-6.107;VQSLOD=1.8422;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:21,1:26:25.73:166,26,0	0/1:17,0:17:17.81:18,0,362	0/0:46,0:9:20.94:0,21,289	0/0:59,0:6:17.95:0,18,155	0/0:20,0:19:6.84:0,7,354	0/0:19,0:19:39.44:0,39,645	0/0:31,0:31:47.04:0,47,442	0/1:29,0:27:99:172,0,308	1/1:21,1:26:8.56:463,9,0	0/0:39,0:38:16.18:0,16,1059	0/1:16,0:15:30.95:31,0,275	1/1:28,16:49:67.90:1701,68,0	1/1:13,12:31:52.42:1851,52,0	1/1:25,6:37:17.70:299,18,0	0/0:20,0:18:18.31:0,18,506	0/0:17,0:17:40.33:0,40,817	0/0:35,0:35:13.96:0,14,1184	0/0:33,0:33:67.37:0,67,1338	0/1:26,0:25:99:111,0,153	0/1:16,0:14:37.98:38,0,48	0/1:98,0:96:99:299,0,373	0/0:1,12:18:0:0,0,0	0/1:2,14:19:0:0,0,0	1/1:33,3:37:45.70:695,46,0	0/1:27,0:27:34.73:35,0,625	0/0:30,0:29:6.74:0,7,836	0/0:18,0:18:1.41:0,1,422	0/1:23,0:22:73.46:73,0,432
chr10	17578088	.	TGC	T	807.43	PASS	AB=0.990;AC=14;AF=0.250;AN=56;BaseQRankSum=1.138;DP=739;FS=10.633;HRun=0;HaplotypeScore=163.0296;InbreedingCoeff=-0.1563;MQ=53.36;MQ0=11;MQRankSum=1.030;QD=3.39;ReadPosRankSum=0.144;VQSLOD=2.2979;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:75.85:0,76,781	0/1:6,0:6:10.30:10,0,26	0/0:40,0:5:5.93:0,6,66	0/0:38,0:16:10.30:0,10,190	0/1:14,0:14:50.44:50,0,57	0/0:20,0:20:23.03:0,23,148	0/0:29,0:29:26.36:0,26,198	0/1:21,1:21:18.30:18,0,451	0/0:28,0:28:37.31:0,37,425	0/1:22,0:22:95.02:95,0,100	1/1:14,0:14:7.26:115,7,0	0/0:36,0:35:76.58:0,77,823	0/0:31,0:31:70.87:0,71,665	0/0:29,0:28:56.31:0,56,576	0/0:17,0:17:17.44:0,17,133	0/0:21,0:21:26.75:0,27,251	0/1:27,0:27:9.14:162,0,9	0/1:22,0:22:27.13:27,0,394	0/1:24,0:23:99:103,0,333	0/0:17,0:17:39.08:0,39,440	0/0:90,3:91:19.42:0,19,1412	0/1:12,0:12:13.82:14,0,233	0/0:14,1:15:16.75:0,17,238	0/0:42,0:42:56.29:0,56,666	0/1:22,0:22:12.88:13,0,64	0/1:30,0:30:72.37:243,0,72	0/1:11,1:12:51.89:55,0,52	0/1:11,0:11:34.99:59,0,35
chr10	17578090	.	CGT	C	2696.21	PASS	AB=1.000;AC=18;AF=0.321;AN=56;BaseQRankSum=-9.671;DP=775;FS=3.414;HRun=0;HaplotypeScore=158.2281;InbreedingCoeff=0.6616;MQ=53.11;MQ0=12;MQRankSum=1.368;QD=16.14;ReadPosRankSum=-0.734;VQSLOD=3.7175;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:47:44.18:0,44,597	1/1:1,6:7:6.02:72,6,0	0/0:43,0:5:4.26:0,4,41	0/0:39,1:16:7.56:0,8,113	1/1:4,9:13:21.06:250,21,0	0/0:12,0:24:8.17:0,8,35	0/0:19,0:38:8.42:0,8,49	0/0:18,0:21:8.82:0,9,338	0/0:12,0:28:23.78:0,24,201	1/1:8,11:20:38.95:442,39,0	1/1:2,12:14:30.09:357,30,0	0/0:17,0:37:30.30:0,30,488	0/0:11,0:30:54.63:0,55,471	0/0:15,0:30:42.01:0,42,423	0/0:8,0:20:5.49:0,5,35	0/0:11,0:28:11.74:0,12,92	1/1:3,24:28:54:622,54,0	0/0:18,0:21:31.46:0,31,375	0/1:10,0:23:23.93:24,0,264	0/0:5,0:18:36.01:0,36,355	0/0:62,0:86:36.83:0,37,975	0/1:9,0:12:23.09:23,0,108	0/0:9,0:17:14.86:0,15,141	0/0:18,0:47:0.30:0,0,449	0/0:11,0:28:1.81:0,2,48	1/1:6,22:28:63.66:750,64,0	1/1:6,4:10:9.33:136,9,0	1/1:3,8:11:18.06:214,18,0
chr10	17578111	.	GTA	G	2164.43	PASS	AB=0.987;AC=21;AF=0.375;AN=56;BaseQRankSum=-7.153;DP=731;FS=0.000;HRun=0;HaplotypeScore=155.9235;InbreedingCoeff=-0.2841;MQ=57.87;MQ0=9;MQRankSum=3.530;QD=4.58;ReadPosRankSum=0.100;VQSLOD=2.2119;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:36,2:38:57.47:119,0,57	0/1:7,0:7:12.50:15,0,12	0/0:49,0:10:9.49:0,9,148	0/0:33,0:15:17.18:0,17,308	1/1:10,0:10:19.47:97,19,0	0/0:21,0:21:12.41:0,12,63	0/0:43,0:43:32.40:0,32,260	0/1:22,0:21:47.76:206,0,48	0/0:23,0:23:23.95:0,24,234	0/1:20,0:20:89.14:89,0,105	0/1:15,0:15:33.12:73,0,33	0/1:33,1:33:79.86:108,0,80	0/1:29,0:29:59.55:60,0,64	0/1:36,0:35:77.80:122,0,78	0/0:18,0:18:17.49:0,17,141	0/0:24,0:24:21.20:0,21,173	0/1:29,0:29:47.98:150,0,48	0/0:19,0:19:53.60:0,54,504	1/1:23,0:23:4.96:265,5,0	0/1:18,0:18:32.27:32,0,40	0/1:71,1:71:99:329,0,166	0/1:9,1:10:19.81:136,0,20	0/1:17,0:17:10.79:62,0,11	0/1:44,2:46:27.89:223,0,28	0/0:26,0:27:19.74:0,20,121	0/1:28,0:28:70.77:161,0,71	0/1:9,0:9:28.27:28,0,51	0/1:9,0:9:3.28:57,0,3
chr10	17578984	.	CA	C	584.57	PASS	AB=0.840;AC=18;AF=0.346;AN=52;BaseQRankSum=0.443;DP=427;FS=0.686;HRun=13;HaplotypeScore=71.0620;InbreedingCoeff=0.4513;MQ=38.33;MQ0=51;MQRankSum=-2.621;QD=3.59;ReadPosRankSum=2.481;VQSLOD=0.2650;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,2:30:10.11:0,10,283	1/1:4,2:5:8.88:62,9,0	./.	./.	1/1:14,16:26:26.72:194,27,0	0/0:14,1:15:4.92:0,5,179	0/0:20,0:18:15.03:0,15,170	0/0:12,0:15:23.84:0,24,126	0/0:14,0:12:12.73:0,13,92	0/1:8,2:9:5.23:61,0,5	1/1:9,5:13:9.47:105,9,0	0/1:12,1:12:4.65:5,0,106	0/0:10,0:10:12.95:0,13,136	0/1:9,1:10:2.71:3,0,146	0/1:9,1:9:11.07:11,0,52	0/0:11,0:11:20.02:0,20,170	1/1:9,4:9:7.94:50,8,0	0/0:30,1:24:22.64:0,23,314	0/0:12,0:16:28.95:0,29,183	0/0:16,0:16:17.60:0,18,107	0/0:10,0:10:2.96:0,3,20	0/0:16,0:16:8.99:0,9,78	0/0:13,0:11:11.98:0,12,107	0/0:25,0:26:20.66:0,21,157	0/1:14,1:10:8.64:9,0,71	0/1:6,6:11:8.35:110,0,8	1/1:4,7:11:14.91:109,15,0	1/1:12,2:8:5.76:36,6,0
chr10	17580402	.	T	TTG	921.66	PASS	AB=0.716;AC=10;AF=0.179;AN=56;BaseQRankSum=-4.240;DP=657;FS=1.842;HRun=0;HaplotypeScore=135.4675;InbreedingCoeff=0.5101;MQ=67.77;MQ0=3;MQRankSum=0.857;QD=5.36;ReadPosRankSum=1.439;VQSLOD=3.2291;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:13,18:33:13.26:216,13,0	0/0:9,0:8:22.33:0,22,189	0/0:24,0:10:8.96:0,9,79	0/0:24,0:17:19.50:0,19,250	0/0:27,0:27:67.51:0,68,543	0/0:23,0:23:55.24:0,55,495	0/0:17,0:17:37.57:0,38,367	0/0:27,0:26:53.25:0,53,483	0/0:24,0:24:58.54:0,59,563	0/0:32,0:32:77.59:0,78,593	0/0:26,0:26:61.01:0,61,468	0/1:15,0:13:8.69:9,0,16	0/1:6,10:18:22.35:73,0,22	0/1:10,12:22:13.08:48,0,13	0/0:37,0:37:91.29:0,91,931	0/0:21,0:21:54.16:0,54,484	0/0:24,0:24:42.70:0,43,313	0/0:16,0:16:37.29:0,37,329	0/0:23,0:22:45.14:0,45,367	0/0:27,0:27:35.28:0,35,420	0/0:12,0:12:30.36:0,30,263	1/1:10,17:26:23.29:385,23,0	0/1:15,24:40:70.20:160,0,70	1/1:6,10:17:14.37:188,14,0	0/0:25,0:25:47.65:0,48,401	0/0:25,0:25:46.94:0,47,323	0/0:33,0:32:65.85:0,66,477	0/0:9,0:9:23.66:0,24,217
chr10	17580406	.	T	TG	3924.68	PASS	AB=0.516;AC=13;AF=0.232;AN=56;BaseQRankSum=4.482;DP=665;FS=5.135;HRun=0;HaplotypeScore=98.1152;InbreedingCoeff=0.9459;MQ=68.51;MQ0=4;MQRankSum=0.464;QD=23.22;ReadPosRankSum=11.901;VQSLOD=3.4582;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:45.37:0,45,335	0/0:8,0:7:21:0,21,197	0/0:25,0:8:16.15:0,16,130	0/0:29,0:19:22.59:0,23,241	0/0:28,0:28:72.47:0,72,649	1/1:0,23:23:51.11:523,51,0	1/1:0,17:17:39.09:400,39,0	0/0:25,0:24:60.42:0,60,560	1/1:1,25:26:59.64:604,60,0	0/0:35,0:35:95.58:0,96,833	0/0:25,0:25:68.91:0,69,678	0/0:18,0:16:23.90:0,24,194	0/0:19,0:19:23.41:0,23,175	0/0:20,0:20:32.99:0,33,297	1/1:1,37:38:92.75:954,93,0	1/1:1,23:24:56.73:585,57,0	0/0:24,0:24:47.44:0,47,348	0/1:1,15:16:0.03:331,0,0	0/0:23,0:22:61.71:0,62,569	0/0:26,0:26:64.23:0,64,547	0/0:10,0:10:29.96:0,30,296	0/0:28,0:27:63.77:0,64,488	0/0:38,0:38:66.33:0,66,512	0/0:17,0:17:26.89:0,27,225	1/1:0,25:25:51.12:527,51,0	0/0:26,0:26:74.52:0,75,627	0/0:31,0:30:85.23:0,85,710	0/0:9,0:9:23.97:0,24,230
chr10	17580419	.	T	TG	2056.27	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-7.410;DP=563;FS=54.375;HRun=1;HaplotypeScore=109.2239;InbreedingCoeff=0.9588;MQ=78.30;MQ0=4;MQRankSum=1.145;QD=15.94;ReadPosRankSum=-2.005;VQSLOD=0.2693;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:39.50:0,40,241	1/1:5,0:5:13.50:98,14,0	0/0:26,0:13:22:0,22,184	0/0:28,0:22:27.77:0,28,203	1/1:14,1:15:34.98:269,35,0	0/0:25,0:25:62.28:0,62,419	0/0:15,0:15:44.58:0,45,315	0/0:23,0:24:50.94:0,51,450	0/0:22,0:22:56.22:0,56,376	1/1:5,15:20:47.62:383,48,0	1/1:21,1:22:58.11:376,58,0	0/0:16,0:15:26.95:0,27,221	0/0:14,0:14:28.07:0,28,201	0/0:19,0:22:44.59:0,45,354	0/0:35,0:35:97.76:0,98,665	0/0:24,0:24:63.93:0,64,443	1/1:2,1:15:2.68:47,3,0	0/0:20,0:20:52.84:0,53,357	0/0:20,0:21:47.90:0,48,416	0/0:21,0:21:38.72:0,39,300	0/0:6,0:6:12.03:0,12,136	0/0:17,0:18:39.18:0,39,244	0/0:35,0:35:54.41:0,54,418	0/0:17,0:17:34.99:0,35,240	0/0:19,0:19:50.46:0,50,352	1/1:12,9:21:56.55:470,57,0	1/1:18,0:18:51.69:365,52,0	1/1:13,0:13:35.18:249,35,0
chr10	17582893	.	A	ATCATC	7289.35	PASS	AB=0.977;AC=16;AF=0.286;AN=56;BaseQRankSum=-10.100;DP=957;FS=4.272;HRun=0;HaplotypeScore=172.9231;InbreedingCoeff=0.8267;MQ=85.01;MQ0=5;MQRankSum=1.023;QD=21.13;ReadPosRankSum=2.169;VQSLOD=4.3089;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:72.09:0,72,1086	0/0:23,0:23:54.13:0,54,870	0/1:46,0:40:4.95:5,0,571	0/1:78,0:64:16.84:17,0,463	0/0:35,0:35:90.19:0,90,1443	1/1:3,20:28:30.10:870,30,0	1/1:9,24:35:5.86:140,6,0	0/0:41,0:41:60.12:0,60,862	1/1:5,27:35:48.16:1390,48,0	0/0:49,0:49:99:0,117,2059	0/0:27,0:27:69.19:0,69,1190	0/0:26,0:27:57.10:0,57,866	0/0:34,0:34:87.25:0,87,1516	0/0:36,0:36:90.20:0,90,1489	1/1:7,23:30:39.13:1131,39,0	1/1:9,24:36:51.18:1476,51,0	0/0:33,0:33:72.20:0,72,1235	1/1:4,21:25:39.13:1131,39,0	0/0:25,0:25:51.07:0,51,725	0/0:37,0:37:90.27:0,90,1587	0/0:39,0:39:90.05:0,90,1456	0/0:29,0:29:69.18:0,69,1153	0/0:31,0:31:75.20:0,75,1296	0/0:19,0:19:51.10:0,51,835	1/1:4,22:28:39.13:1131,39,0	0/0:34,0:34:81.24:0,81,1390	0/0:43,0:43:90.15:0,90,1360	0/0:22,0:22:48.15:0,48,863
chr10	17584709	.	CTGTGTGTGTGTGTGTG	C	788.29	PASS	AB=0.715;AC=14;AF=0.269;AN=52;BaseQRankSum=5.157;DP=420;FS=17.039;HRun=0;HaplotypeScore=154.9028;InbreedingCoeff=0.1713;MQ=37.80;MQ0=31;MQRankSum=-1.479;QD=4.45;ReadPosRankSum=1.661;VQSLOD=1.2835;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:10.28:0,10,584	0/1:4,0:6:7.12:25,0,7	./.	0/0:4,0:2:3.01:0,3,225	0/0:9,0:14:6.08:0,6,152	1/1:8,3:9:2.02:73,2,0	0/0:14,5:17:2.36:0,2,6	0/0:16,0:12:33:0,33,1292	1/1:16,5:20:6.02:219,6,0	0/1:18,0:25:86.30:86,0,601	0/0:8,0:12:1.36:0,1,3	0/0:25,0:23:15.05:0,15,548	0/0:18,0:18:9.03:0,9,501	0/0:20,0:18:14.65:0,15,699	0/0:7,3:10:0.47:0,0,1	1/1:10,6:18:3.10:156,3,0	0/1:19,0:29:11.07:11,0,225	1/1:4,3:5:3.01:133,3,0	0/0:11,0:8:15.05:0,15,717	0/0:7,0:7:0.47:0,0,1	./.	0/0:7,0:5:0.47:0,0,1	0/0:9,0:8:6.49:0,6,377	0/0:18,0:13:9.23:0,9,376	0/0:5,7:12:0.47:0,0,1	0/1:16,0:24:99:100,0,475	0/1:7,0:17:83.91:84,0,246	0/1:6,0:9:8.72:35,0,9
chr10	17588054	.	T	TTGTGTGTGTGTGTG	3996.03	PASS	AB=0.978;AC=24;AF=0.429;AN=56;BaseQRankSum=6.364;DP=551;FS=15.449;HRun=0;HaplotypeScore=216.8749;InbreedingCoeff=0.0831;MQ=62.42;MQ0=7;MQRankSum=-2.632;QD=10.83;ReadPosRankSum=-3.951;VQSLOD=0.7623;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:37,0:37:67.32:67,0,445	0/0:6,0:6:3.01:0,3,49	0/0:21,0:11:23.18:0,23,357	0/0:36,0:30:57.76:0,58,985	0/1:17,0:16:29.16:29,0,261	1/1:16,1:17:27.06:383,27,0	1/1:27,0:27:45.68:623,46,0	0/1:21,0:20:99:362,0,498	0/1:14,0:16:63.06:63,0,321	0/1:15,0:15:28.05:28,0,474	0/1:13,0:12:24.38:24,0,186	0/1:17,0:19:76.04:76,0,300	0/0:14,0:14:28.41:0,28,377	0/1:13,0:13:99:119,0,154	1/1:7,10:23:8.17:239,8,0	1/1:3,11:20:18.03:841,18,0	0/1:20,0:18:99:198,0,391	1/1:18,0:17:24.79:313,25,0	0/0:20,0:17:45.59:0,46,464	0/1:13,0:14:41.49:41,0,169	0/0:28,0:28:26.76:0,27,318	0/0:24,0:24:23.75:0,24,264	0/0:9,0:9:8.63:0,9,140	0/1:28,0:30:99:124,0,375	1/1:25,0:25:53.95:415,54,0	0/1:22,0:22:48.53:49,0,626	0/0:13,0:13:36.04:0,36,427	0/0:11,0:11:32.85:0,33,300
chr10	17588833	.	T	TA	881.18	PASS	AB=0.807;AC=11;AF=0.196;AN=56;BaseQRankSum=5.665;DP=520;FS=8.738;HRun=0;HaplotypeScore=90.6375;InbreedingCoeff=0.5804;MQ=47.04;MQ0=44;MQRankSum=-4.652;QD=7.28;ReadPosRankSum=5.536;VQSLOD=2.3567;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:15:41.01:0,41,321	0/0:10,0:9:14.37:0,14,93	0/0:41,0:9:20.66:0,21,151	0/0:47,0:14:19.92:0,20,179	0/0:18,0:16:33.91:0,34,281	0/1:16,2:17:15.28:149,0,15	1/1:17,2:18:23.79:237,24,0	0/0:23,0:20:43.94:0,44,355	1/1:16,0:13:8.72:94,9,0	0/0:25,0:21:48.69:0,49,327	0/0:16,0:16:36.37:0,36,256	0/0:10,0:8:16.57:0,17,142	0/0:8,0:6:17.50:0,18,124	0/0:17,0:15:39.55:0,40,315	1/1:13,2:13:8.07:97,8,0	0/1:5,3:10:11.22:82,0,11	0/0:26,0:22:49.77:0,50,355	0/1:14,1:14:21.60:141,0,22	0/0:42,0:30:67.19:0,67,542	0/0:10,0:10:26.90:0,27,217	0/0:7,0:5:11.58:0,12,88	0/0:4,0:3:5.95:0,6,46	0/0:11,0:9:22.13:0,22,144	0/0:11,0:10:10.28:0,10,73	1/1:24,1:23:8.16:241,8,0	0/0:20,0:19:47.38:0,47,362	0/0:19,0:17:23.56:0,24,243	0/0:14,0:11:18.65:0,19,117
chr10	17588867	.	CT	C	2311.83	PASS	AB=0.826;AC=49;AF=0.942;AN=52;BaseQRankSum=-1.660;DP=217;FS=39.268;HRun=8;HaplotypeScore=55.1777;InbreedingCoeff=-0.1096;MQ=28.64;MQ0=7;MQRankSum=0.374;QD=10.90;ReadPosRankSum=4.691;VQSLOD=-0.0141;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,4:6:8.90:83,9,0	1/1:4,2:5:6.01:56,6,0	./.	./.	1/1:1,5:5:9.01:82,9,0	1/1:3,6:8:14.97:126,15,0	1/1:4,10:13:13.89:115,14,0	1/1:7,10:17:29.84:287,30,0	1/1:3,8:10:29.98:263,30,0	1/1:5,3:7:8.97:80,9,0	1/1:5,7:12:17.71:149,18,0	1/1:1,5:6:14.99:138,15,0	1/1:2,6:8:18.01:167,18,0	1/1:0,4:4:12.01:112,12,0	1/1:4,5:9:2.57:27,3,0	0/1:4,5:9:0.37:126,0,0	0/1:19,2:16:4.19:32,0,4	1/1:5,1:3:2.83:28,3,0	1/1:5,5:9:12.01:114,12,0	1/1:1,3:4:8.93:72,9,0	1/1:1,1:1:3:29,3,0	1/1:1,1:2:3:27,3,0	1/1:0,2:2:6:54,6,0	1/1:3,2:4:5.92:45,6,0	1/1:4,3:7:5.86:49,6,0	1/1:4,3:6:8.98:85,9,0	1/1:6,2:8:2.02:27,2,0	0/1:11,1:12:2.95:23,0,3
chr10	17588899	.	GC	G	5488.87	PASS	AC=52;AF=1.000;AN=52;BaseQRankSum=1.008;DP=227;FS=3.558;HRun=3;HaplotypeScore=40.5276;InbreedingCoeff=-0.0349;MQ=37.32;MQ0=10;MQRankSum=0.396;QD=24.18;ReadPosRankSum=1.551;VQSLOD=4.2517;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,12:10:27.08:334,27,0	1/1:1,2:3:9.03:106,9,0	./.	./.	1/1:3,7:7:15.05:185,15,0	1/1:1,12:13:30.05:351,30,0	1/1:2,15:16:30.09:370,30,0	1/1:5,14:18:36.10:431,36,0	1/1:4,7:10:15.05:185,15,0	1/1:2,5:6:12.94:182,13,0	1/1:0,8:7:18.01:204,18,0	1/1:0,9:9:21.02:242,21,0	1/1:0,12:12:33.10:407,33,0	1/1:2,8:9:21.07:260,21,0	1/1:0,7:7:12.04:148,12,0	1/1:0,5:5:15.05:185,15,0	1/1:5,12:12:27.08:332,27,0	1/1:2,5:4:9.03:111,9,0	1/1:3,6:7:15.05:185,15,0	1/1:0,8:8:17.66:177,18,0	1/1:2,10:11:24.55:297,25,0	1/1:0,1:1:3.01:37,3,0	1/1:1,2:3:3.01:37,3,0	1/1:1,7:6:14.98:166,15,0	1/1:0,2:2:6.02:74,6,0	1/1:1,7:7:21.07:260,21,0	1/1:0,5:5:15.05:186,15,0	1/1:1,2:2:3.01:37,3,0
chr10	17589174	.	ATT	A	2000.45	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=2.377;DP=301;FS=37.561;HRun=13;HaplotypeScore=44.2905;InbreedingCoeff=0.8144;MQ=72.57;MQ0=5;MQRankSum=-0.782;QD=17.55;ReadPosRankSum=5.139;VQSLOD=-0.1106;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:18:23.24:0,23,258	1/1:1,3:4:2.89:29,3,0	0/0:16,0:12:14.01:0,14,177	0/0:20,0:14:19.18:0,19,234	1/1:2,8:9:17.99:175,18,0	0/0:13,0:15:22.54:0,23,243	0/0:3,0:4:6.01:0,6,72	0/0:20,0:22:49.59:0,50,596	1/1:2,3:5:6:58,6,0	1/1:3,11:14:33.04:320,33,0	1/1:3,7:10:18:174,18,0	0/0:5,0:5:12.04:0,12,172	0/0:5,0:5:12.04:0,12,165	0/0:1,0:1:3.01:0,3,43	0/0:9,0:9:15.05:0,15,214	0/0:3,0:3:9.03:0,9,127	1/1:2,18:21:41.80:390,42,0	0/0:21,0:20:36.12:0,36,518	0/0:12,0:12:33.06:0,33,452	0/0:8,0:9:24.02:0,24,304	0/0:5,0:4:6.02:0,6,87	0/0:1,0:1:3.01:0,3,43	0/0:4,0:4:12.04:0,12,173	0/0:2,0:2:0:0,0,0	0/0:10,0:10:21.06:0,21,286	1/1:2,13:14:39.03:370,39,0	1/1:6,6:11:17.99:175,18,0	1/1:1,20:22:53.82:507,54,0
chr10	17589902	.	GT	G	18389.10	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=4.053;DP=767;FS=3.305;HRun=8;HaplotypeScore=103.9867;InbreedingCoeff=0.9998;MQ=78.21;MQ0=0;MQRankSum=-9.411;QD=25.26;ReadPosRankSum=4.763;VQSLOD=4.7369;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,34:34:93.07:886,93,0	1/1:1,13:14:33.05:319,33,0	0/0:26,0:26:54.06:0,54,612	0/0:13,0:13:39.12:0,39,466	1/1:3,27:30:75.11:724,75,0	1/1:1,36:37:99:1014,105,0	1/1:0,23:23:69.11:666,69,0	1/1:5,40:45:99:1125,120,0	1/1:4,29:33:84.13:811,84,0	1/1:3,22:25:66.09:632,66,0	1/1:5,30:35:84.12:811,84,0	1/1:3,25:28:69.11:666,69,0	1/1:2,44:46:99:1217,126,0	1/1:2,22:24:60.09:579,60,0	1/1:3,23:26:66.10:637,66,0	1/1:1,27:28:78.12:753,78,0	1/1:1,17:18:48.08:464,48,0	1/1:0,16:16:48.08:464,48,0	1/1:4,24:28:72.08:687,72,0	1/1:3,28:31:75.10:724,75,0	1/1:4,23:27:69.10:666,69,0	1/1:1,22:23:60.09:579,60,0	1/1:1,24:25:69.11:666,69,0	1/1:1,19:20:51.08:493,51,0	1/1:2,22:24:63.10:608,63,0	1/1:5,23:28:69.09:661,69,0	1/1:1,42:43:99:1101,114,0	1/1:1,16:17:45.07:435,45,0
chr10	17591275	.	A	ACAG	32167.91	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-7.279;DP=643;FS=1.500;HRun=0;HaplotypeScore=95.8052;InbreedingCoeff=0.9930;MQ=78.68;MQ0=2;MQRankSum=-8.376;QD=53.17;ReadPosRankSum=3.640;VQSLOD=6.9537;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,41:46:99:1912,102,0	1/1:0,15:15:45.15:1037,45,0	0/0:20,0:20:43.40:0,43,671	0/0:18,0:18:43.39:0,43,687	1/1:0,12:14:33.11:758,33,0	1/1:2,14:18:39.13:899,39,0	1/1:5,28:34:90.31:1961,90,0	1/1:5,12:19:51.16:1082,51,0	1/1:2,22:25:66.23:1488,66,0	1/1:5,19:24:66.23:1411,66,0	1/1:3,9:13:21.07:415,21,0	1/1:2,20:23:57.19:1259,57,0	1/1:1,25:26:72.25:1590,72,0	1/1:2,12:14:30.10:657,30,0	1/1:3,17:21:45.15:1003,45,0	1/1:4,15:19:45.15:998,45,0	1/1:2,26:32:63.22:1438,63,0	1/1:1,27:28:75.19:1662,75,0	1/1:4,18:23:69.21:1451,69,0	1/1:3,15:18:48.16:972,48,0	1/1:5,31:37:75.26:1696,75,0	1/1:4,16:21:42.14:809,42,0	1/1:0,13:12:30.10:642,30,0	1/1:3,44:47:99:2490,111,0	1/1:3,22:24:66.23:1482,66,0	1/1:3,16:20:56.85:1156,57,0	1/1:1,23:24:66.23:1486,66,0	1/1:0,6:6:18.06:415,18,0
chr10	17592887	.	GTGCT	G	7583.47	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=10.829;DP=675;FS=6.003;HRun=0;HaplotypeScore=131.7014;InbreedingCoeff=0.9997;MQ=82.78;MQ0=0;MQRankSum=-4.851;QD=39.50;ReadPosRankSum=3.900;VQSLOD=5.2177;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,37:41:72.25:1273,72,0	0/0:9,0:9:27.09:0,27,699	0/0:13,0:13:32.29:0,32,855	0/0:27,0:27:66.19:0,66,1581	0/0:31,0:31:87.26:0,87,2155	0/0:20,0:20:48.15:0,48,1195	0/0:35,0:35:93.29:0,93,2279	0/0:20,0:20:51.16:0,51,1202	0/0:27,0:27:75.26:0,75,1931	0/0:26,0:26:72.25:0,72,1807	0/0:13,0:13:36.12:0,36,928	1/1:1,29:30:84.29:1494,84,0	1/1:5,23:28:69.24:1222,69,0	1/1:3,19:22:51.17:916,51,0	0/0:22,0:22:63.22:0,63,1627	0/0:13,0:13:36.12:0,36,934	0/0:38,0:38:99:0,105,2673	0/0:21,0:20:57.17:0,57,1424	0/0:16,0:16:45.15:0,45,1145	0/0:19,0:19:54.18:0,54,1352	0/0:57,0:57:99:0,153,3720	1/1:4,13:17:36.12:630,36,0	1/1:1,17:18:39.13:700,39,0	1/1:3,32:35:75.26:1348,75,0	0/0:21,0:21:60.21:0,60,1549	0/0:23,0:23:66.23:0,66,1707	0/0:16,0:16:42.14:0,42,1080	0/0:16,0:16:42.14:0,42,1091
chr10	17594254	.	CA	C	2916.71	PASS	AB=0.711;AC=27;AF=0.482;AN=56;BaseQRankSum=-2.633;DP=563;FS=15.866;HRun=12;HaplotypeScore=94.7370;InbreedingCoeff=0.8232;MQ=74.46;MQ0=2;MQRankSum=4.413;QD=10.06;ReadPosRankSum=5.675;VQSLOD=1.1536;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:30:31.75:0,32,179	1/1:0,12:12:35.86:279,36,0	0/0:26,0:24:17.23:0,17,249	0/0:17,0:11:8.93:0,9,75	1/1:8,22:31:74.94:557,75,0	1/1:2,0:26:40.73:118,41,0	1/1:2,0:22:30.55:88,31,0	0/0:12,0:26:27.54:0,28,164	0/0:13,0:13:36.02:0,36,344	1/1:5,11:16:29.85:232,30,0	0/1:3,9:13:1.51:162,0,2	0/0:6,0:14:17.33:0,17,97	0/0:10,0:26:23.27:0,23,136	0/0:10,0:26:33.04:0,33,192	1/1:1,0:16:20.36:59,20,0	1/1:0,0:17:30.56:88,31,0	1/1:6,24:30:77.30:599,77,0	1/1:3,0:17:26.47:76,26,0	0/1:7,0:15:8.71:9,0,89	0/0:5,0:25:29.53:0,30,196	0/0:5,0:16:15.56:0,16,75	0/0:5,0:17:40.26:0,40,253	0/0:6,0:20:27.36:0,27,176	0/0:2,0:10:11.62:0,12,72	1/1:0,1:23:43.73:141,44,0	1/1:4,16:22:48.82:354,49,0	0/1:5,16:21:3.87:257,0,4	1/1:3,6:9:14.91:116,15,0
chr10	17594514	.	CT	C	10399.51	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=14.627;DP=710;FS=3.682;HRun=2;HaplotypeScore=72.8577;InbreedingCoeff=0.9997;MQ=87.98;MQ0=0;MQRankSum=-2.219;QD=35.13;ReadPosRankSum=2.690;VQSLOD=5.4986;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,39:40:99:1402,108,0	0/0:11,0:11:30.10:0,30,448	0/0:33,0:31:81.24:0,81,1214	0/0:28,0:28:62.36:0,62,904	0/0:21,0:21:60.18:0,60,875	0/0:20,0:20:57.19:0,57,849	0/0:26,0:26:78.22:0,78,1106	1/1:0,28:28:81.20:993,81,0	0/0:23,0:23:69.21:0,69,995	0/0:23,0:23:66.21:0,66,954	0/0:10,0:10:27.09:0,27,405	1/1:1,19:20:48.16:623,48,0	1/1:0,31:31:90.29:1168,90,0	1/1:1,31:32:84.27:1086,84,0	0/0:30,0:30:90.28:0,90,1308	0/0:36,0:36:99:0,108,1597	0/0:38,0:38:99:0,111,1609	0/0:23,0:23:69.22:0,69,1013	1/1:0,22:22:66.18:816,66,0	1/1:0,24:24:66.21:850,66,0	1/1:0,42:42:99:1519,117,0	1/1:0,21:21:54.18:698,54,0	1/1:0,13:13:32.97:428,33,0	1/1:0,23:23:63.20:818,63,0	0/0:17,0:17:51.17:0,51,763	0/0:35,0:35:99:0,102,1494	0/0:24,0:24:69.22:0,69,1007	0/0:16,0:16:48.15:0,48,686
chr10	17595113	.	G	GCACGCACA	7165.09	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-10.295;DP=690;FS=0.000;HRun=0;HaplotypeScore=163.8131;InbreedingCoeff=0.9898;MQ=64.37;MQ0=1;MQRankSum=-12.319;QD=55.54;ReadPosRankSum=0.383;VQSLOD=4.7116;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:87.26:0,87,2075	0/0:9,0:9:21.07:0,21,545	0/0:18,0:17:35.98:0,36,653	0/0:22,0:21:37.35:0,37,711	0/0:27,0:27:54.19:0,54,1395	1/1:8,13:21:21.07:877,21,0	1/1:14,16:31:42.14:1615,42,0	0/0:37,0:37:51.15:0,51,1125	0/0:26,0:26:66.09:0,66,1373	0/0:38,0:38:96.33:0,96,2490	0/0:29,0:29:57.15:0,57,1367	0/0:19,0:19:48.15:0,48,1154	0/0:21,0:21:48.15:0,48,1192	0/0:17,0:17:45.14:0,45,1109	1/1:5,15:21:36.12:1503,36,0	1/1:6,8:15:24.08:931,24,0	0/0:33,0:33:81.23:0,81,1945	1/1:9,13:22:11.11:1111,11,0	0/0:23,0:22:36.10:0,36,879	0/0:28,0:28:69.22:0,69,1671	0/0:27,0:27:54.15:0,54,1266	0/0:26,0:26:63.17:0,63,1403	0/0:20,0:20:42.13:0,42,1033	0/0:29,0:29:48.15:0,48,1187	1/1:8,11:19:27.09:1128,27,0	0/0:38,0:38:81.27:0,81,2037	0/0:23,0:23:66.20:0,66,1658	0/0:12,0:12:30.10:0,30,778
chr10	17597136	.	G	GA	8518.29	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=4.601;DP=592;FS=2.726;HRun=5;HaplotypeScore=92.7726;InbreedingCoeff=0.9975;MQ=80.94;MQ0=0;MQRankSum=-1.613;QD=32.89;ReadPosRankSum=0.225;VQSLOD=4.8383;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,29:33:46.61:944,47,0	0/0:7,0:7:18.05:0,18,193	0/0:25,0:25:57.68:0,58,571	0/0:16,0:15:30.04:0,30,311	0/0:26,0:26:72.16:0,72,765	0/0:23,0:23:66.03:0,66,691	0/0:25,0:25:60.15:0,60,645	1/1:3,21:24:60.19:783,60,0	0/0:22,0:22:63.14:0,63,668	0/0:22,0:22:63.15:0,63,671	0/0:12,0:12:30.07:0,30,322	1/1:1,16:17:42.09:533,42,0	1/1:2,23:25:63.20:829,63,0	1/1:4,15:19:48.12:613,48,0	0/0:17,0:17:51.13:0,51,548	0/0:17,0:17:48.12:0,48,516	0/0:27,0:27:75.19:0,75,806	0/0:17,0:17:45.11:0,45,484	1/1:2,19:21:57.16:732,57,0	1/1:2,31:33:84.24:1086,84,0	1/1:1,17:18:48.16:631,48,0	1/1:2,16:18:42.14:552,42,0	1/1:0,24:24:69.22:907,69,0	1/1:2,25:27:69.22:908,69,0	0/0:18,0:18:54.08:0,54,553	0/0:26,0:26:69.16:0,69,734	0/0:25,0:25:69.17:0,69,741	0/0:8,0:8:18.04:0,18,193
chr10	17597439	.	G	GCA	9509.02	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-0.880;DP=766;FS=2.227;HRun=0;HaplotypeScore=95.3415;InbreedingCoeff=0.9971;MQ=81.50;MQ0=0;MQRankSum=-7.653;QD=49.27;ReadPosRankSum=2.009;VQSLOD=5.6634;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,132,1921	0/0:5,0:5:15.05:0,15,217	0/0:24,0:24:60.26:0,60,979	0/0:26,0:26:74.35:0,74,1027	0/0:22,0:22:63.21:0,63,922	1/1:2,18:20:48.16:880,48,0	1/1:3,27:32:81.07:1495,81,0	0/0:33,0:33:84.28:0,84,1236	1/1:1,34:35:96.33:1798,96,0	0/0:33,0:33:93.31:0,93,1369	0/0:20,0:20:54.18:0,54,793	0/0:34,0:34:99:0,99,1416	0/0:36,0:36:99:0,105,1482	0/0:27,0:27:72.18:0,72,999	1/1:2,31:33:93.32:1742,93,0	1/1:1,23:25:66.23:1235,66,0	0/0:25,0:25:72.24:0,72,1060	1/1:0,23:23:63.22:1180,63,0	0/0:19,0:19:54.17:0,54,763	0/0:18,0:18:54.18:0,54,794	0/0:42,0:42:99:0,114,1678	0/0:24,0:24:69.23:0,69,1016	0/0:34,0:34:96.32:0,96,1409	0/0:23,0:23:69.23:0,69,1015	1/1:0,25:25:63.22:1179,63,0	0/0:36,0:36:99:0,108,1590	0/0:32,0:32:96.32:0,96,1410	0/0:11,0:11:33.11:0,33,485
chr10	17597710	.	AAGG	A	3053.81	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=11.128;DP=708;FS=8.783;HRun=0;HaplotypeScore=101.7084;InbreedingCoeff=0.9905;MQ=74.91;MQ0=0;MQRankSum=-1.177;QD=28.28;ReadPosRankSum=-0.014;VQSLOD=3.4059;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,142,2991	0/0:10,0:10:24.08:0,24,511	0/0:16,0:15:20.76:0,21,442	0/0:20,0:19:12.63:0,13,479	0/0:24,0:24:66.23:0,66,1363	0/0:24,0:24:63.20:0,63,1288	0/0:36,0:36:90.31:0,90,1866	1/1:12,20:32:57.18:851,57,0	0/0:30,0:30:84.29:0,84,1767	0/0:29,0:29:78.27:0,78,1641	0/0:13,0:13:36.12:0,36,764	0/0:25,0:25:69.24:0,69,1468	0/0:30,0:30:78.27:0,78,1659	0/0:29,0:29:75.26:0,75,1572	0/0:23,0:23:60.19:0,60,1224	0/0:23,0:23:66.23:0,66,1394	0/0:30,0:30:81.28:0,81,1728	0/0:18,0:18:45.15:0,45,939	1/1:7,9:16:30.08:433,30,0	1/1:2,15:17:33.11:504,33,0	1/1:4,39:43:93.21:1426,93,0	0/0:25,0:25:60.21:0,60,1279	0/0:18,0:18:39.13:0,39,832	0/0:31,0:31:78.27:0,78,1647	0/0:25,0:25:69.24:0,69,1471	0/0:24,0:24:69.23:0,69,1424	0/0:22,0:22:51.17:0,51,1072	0/0:19,0:19:54.16:0,54,1107
chr10	17598468	.	T	TAG	7565.19	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-12.073;DP=628;FS=2.532;HRun=0;HaplotypeScore=74.4194;InbreedingCoeff=0.9999;MQ=79.18;MQ0=0;MQRankSum=-4.978;QD=48.81;ReadPosRankSum=2.252;VQSLOD=6.1525;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,21:22:57.20:1045,57,0	0/0:14,0:14:42.14:0,42,601	0/0:28,0:28:71.05:0,71,981	0/0:18,0:18:42.14:0,42,591	0/0:18,0:18:54.18:0,54,773	0/0:22,0:22:60.20:0,60,860	0/0:16,0:16:42.14:0,42,602	0/0:28,0:28:81.22:0,81,1107	0/0:19,0:19:57.19:0,57,815	0/0:33,0:33:93.30:0,93,1302	0/0:14,0:14:36.12:0,36,516	1/1:1,26:28:75.26:1370,75,0	1/1:0,18:18:54.19:990,54,0	1/1:4,20:27:63.22:1136,63,0	0/0:17,0:17:51.16:0,51,713	0/0:16,0:16:48.15:0,48,671	0/0:25,0:25:69.21:0,69,969	0/0:32,0:32:93.31:0,93,1333	0/0:16,0:16:42.14:0,42,595	0/0:25,0:25:75.25:0,75,1074	0/0:40,0:40:99:0,111,1590	1/1:1,18:19:51.17:934,51,0	1/1:1,19:20:57.20:1045,57,0	1/1:1,20:21:57.20:1045,57,0	0/0:24,0:24:72.24:0,72,1032	0/0:21,0:21:60.20:0,60,860	0/0:32,0:30:87.26:0,87,1205	0/0:15,0:15:45.15:0,45,645
chr10	17599073	.	AGT	A	1129.69	PASS	AB=1.000;AC=22;AF=0.407;AN=54;BaseQRankSum=1.718;DP=441;FS=3.200;HRun=0;HaplotypeScore=56.7628;InbreedingCoeff=0.6391;MQ=69.50;MQ0=12;MQRankSum=-0.652;QD=8.07;ReadPosRankSum=1.523;VQSLOD=2.9082;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:27:3.01:0,3,39	1/1:6,0:6:2.04:7,2,0	0/0:28,0:19:56.89:0,57,821	0/0:29,0:17:47.82:0,48,736	0/0:5,0:5:0.51:0,1,2	./.	0/0:2,20:22:0:0,0,0	0/0:14,0:14:42.11:0,42,715	1/1:14,0:14:12.61:399,13,0	0/0:9,0:9:0.20:0,0,1	1/1:7,0:6:1.83:4,2,0	0/0:18,0:18:30.08:0,30,452	0/0:11,0:11:20.96:0,21,332	0/0:13,0:13:39.12:0,39,580	1/1:0,7:7:6.02:81,6,0	1/1:10,1:10:18.05:244,18,0	1/1:27,0:27:3.09:28,3,0	1/1:2,19:20:6.02:84,6,0	0/0:13,0:13:36.12:0,36,621	0/0:14,0:14:39.13:0,39,608	0/0:44,0:42:99:0,102,1625	0/1:12,0:12:0.88:1,0,266	0/0:6,0:6:15.04:0,15,217	0/0:38,0:38:2.73:0,3,46	1/1:12,0:12:30.09:419,30,0	1/1:8,0:8:5.34:19,5,0	1/1:14,0:14:0.30:3,0,0	0/1:1,0:1:0:0,0,0
chr10	17599587	.	GGGAGAGGAGA	G	1097.76	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.685;DP=653;FS=0.000;HRun=0;HaplotypeScore=187.8674;InbreedingCoeff=0.8795;MQ=79.27;MQ0=24;MQRankSum=-4.637;QD=68.61;ReadPosRankSum=1.592;VQSLOD=3.3370;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:32:75.20:0,75,2818	0/0:11,0:9:12.04:0,12,370	0/0:38,0:23:44.04:0,44,873	0/0:64,0:43:75.91:0,76,1658	0/0:26,0:26:63.20:0,63,2444	0/0:23,0:23:54.14:0,54,1885	0/0:22,0:22:54.11:0,54,1906	0/0:18,0:16:30.10:0,30,685	1/1:3,13:16:39.13:1192,39,0	0/0:20,0:20:39.13:0,39,1711	0/0:24,0:24:47.73:0,48,2002	0/0:22,0:19:45.11:0,45,2042	0/0:24,0:24:66.21:0,66,2804	0/0:24,0:23:63.20:0,63,2739	0/0:19,0:19:48.15:0,48,2086	0/0:13,0:13:33.10:0,33,1325	0/0:26,0:25:72.23:0,72,3160	0/0:17,0:17:33.09:0,33,1503	0/0:24,0:20:54.17:0,54,1737	0/0:23,0:23:57.17:0,57,2114	0/0:32,0:31:72.59:0,73,2946	0/0:18,0:18:39:0,39,1371	0/0:27,0:26:66.20:0,66,2682	0/0:20,0:19:45.13:0,45,1945	0/0:20,0:20:54.19:0,54,2417	0/0:30,0:29:63.22:0,63,2947	0/0:14,0:14:36.12:0,36,1327	0/0:3,0:2:6.02:0,6,299
chr10	17599822	.	C	CT	6100.73	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-13.329;DP=577;FS=0.000;HRun=3;HaplotypeScore=53.2483;InbreedingCoeff=0.9996;MQ=78.83;MQ0=0;MQRankSum=-2.942;QD=37.20;ReadPosRankSum=1.026;VQSLOD=5.0858;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:57.17:0,57,682	1/1:0,9:9:27.09:378,27,0	0/0:15,0:15:45.13:0,45,527	0/0:19,0:19:48.07:0,48,526	1/1:3,27:30:84.14:1103,84,0	0/0:29,0:29:87.25:0,87,1030	0/0:24,0:24:66.20:0,66,792	0/0:24,0:24:63.18:0,63,747	0/0:18,0:18:51.16:0,51,612	1/1:1,22:23:66.19:884,66,0	1/1:2,13:15:36.12:504,36,0	0/0:21,0:21:63.19:0,63,756	0/0:25,0:25:63.19:0,63,753	0/0:12,0:12:36.11:0,36,432	0/0:16,0:16:45.13:0,45,528	0/0:13,0:13:36.11:0,36,432	1/1:1,17:18:45.15:630,45,0	0/0:25,0:25:69.21:0,69,826	0/0:24,0:24:72.22:0,72,864	0/0:24,0:24:69.21:0,69,827	0/0:23,0:23:69.19:0,69,814	0/0:23,0:23:63.19:0,63,754	0/0:22,0:22:66.20:0,66,792	0/0:19,0:19:57.17:0,57,683	0/0:14,0:14:39.12:0,39,468	1/1:0,18:18:51.17:711,51,0	1/1:1,41:41:99:1512,108,0	1/1:0,9:9:27.09:378,27,0
chr10	17600759	.	T	TG	5720.67	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-8.025;DP=761;FS=6.705;HRun=2;HaplotypeScore=92.5214;InbreedingCoeff=0.9992;MQ=64.28;MQ0=3;MQRankSum=-0.811;QD=38.14;ReadPosRankSum=-0.123;VQSLOD=4.7763;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:56:99:0,153,1753	1/1:2,9:11:30.10:431,30,0	0/0:38,0:32:93.26:0,93,1114	0/0:29,1:25:72.22:0,72,876	1/1:2,14:16:48.10:648,48,0	0/0:19,0:19:57.10:0,57,672	0/0:26,0:26:69.09:0,69,803	0/0:27,0:27:75.23:0,75,923	0/0:37,0:37:96.27:0,96,1172	1/1:4,17:21:57.18:803,57,0	1/1:1,14:15:36.12:517,36,0	0/0:31,0:31:81.23:0,81,975	0/0:27,0:27:72.23:0,72,892	0/0:31,0:31:78.21:0,78,949	0/0:48,0:48:99:0,132,1618	0/0:28,0:28:84.18:0,84,992	1/1:2,24:26:69.02:892,69,0	0/0:28,0:28:81.23:0,81,989	0/0:20,0:20:57.17:0,57,694	0/0:25,0:25:75.07:0,75,874	0/0:46,0:46:99:0,126,1506	0/0:15,0:15:45.11:0,45,541	0/0:18,0:18:54.17:0,54,668	0/0:41,0:41:99:0,120,1420	0/0:18,0:18:48.09:0,48,560	1/1:3,32:35:96.31:1380,96,0	1/1:2,16:18:54.14:752,54,0	1/1:0,8:8:21.07:297,21,0
chr10	17615675	.	T	TCTC	23357.32	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-12.635;DP=621;FS=5.817;HRun=0;HaplotypeScore=87.9084;InbreedingCoeff=0.9803;MQ=83.11;MQ0=0;MQRankSum=-6.284;QD=53.57;ReadPosRankSum=3.671;VQSLOD=7.2975;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,49:53:99:2777,126,0	1/1:0,2:2:6.02:132,6,0	0/0:31,0:31:69.38:0,69,1080	0/0:28,0:28:46.21:0,46,957	1/1:3,6:10:27.09:542,27,0	0/0:15,0:15:42.14:0,42,674	0/0:22,0:22:63.20:0,63,989	1/1:12,26:38:84.29:1797,84,0	1/1:0,25:25:66.23:1450,66,0	1/1:3,15:18:48.15:1002,48,0	1/1:0,11:11:30.10:662,30,0	1/1:2,19:21:57.20:1253,57,0	1/1:1,21:22:63.22:1383,63,0	1/1:2,32:35:96.33:2118,96,0	0/0:29,0:29:81.27:0,81,1289	0/0:25,0:25:72.25:0,72,1157	1/1:2,26:30:72.25:1581,72,0	0/0:22,0:22:66.22:0,66,1051	1/1:8,13:22:48.14:965,48,0	1/1:0,7:7:21.07:463,21,0	1/1:2,26:28:60.21:1324,60,0	1/1:4,14:19:39.13:859,39,0	1/1:0,15:17:42.62:926,43,0	1/1:2,27:30:72.25:1589,72,0	0/0:12,0:12:36.12:0,36,574	1/1:6,11:18:36.09:724,36,0	1/1:3,21:24:66.23:1429,66,0	1/1:0,5:6:18.06:381,18,0
chr10	17616113	.	GA	G	3812.40	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=13.545;DP=571;FS=1.681;HRun=7;HaplotypeScore=65.9053;InbreedingCoeff=0.9335;MQ=56.18;MQ0=18;MQRankSum=-5.422;QD=23.11;ReadPosRankSum=1.376;VQSLOD=3.6742;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,135,1658	1/1:3,5:8:18.03:177,18,0	0/1:11,0:3:1.64:2,0,67	0/0:13,0:9:7.52:0,8,99	1/1:2,22:24:51.10:515,51,0	0/0:22,0:21:51.16:0,51,630	0/0:18,0:17:42.13:0,42,528	0/0:25,0:24:57.17:0,57,688	0/0:11,0:10:30.08:0,30,364	1/1:8,17:23:57.12:576,57,0	1/1:5,12:16:36.06:358,36,0	0/0:23,0:23:29.71:0,30,534	0/0:19,0:19:54.15:0,54,665	0/0:13,0:13:33.11:0,33,414	0/0:17,0:17:45.13:0,45,552	0/0:20,0:19:54.15:0,54,656	1/1:4,20:24:63.14:640,63,0	0/0:18,0:18:45.13:0,45,550	0/0:20,1:20:17.50:0,17,518	0/0:18,0:18:39.12:0,39,477	0/0:23,0:21:48.07:0,48,566	0/0:25,0:24:60.17:0,60,722	0/0:19,0:19:54.17:0,54,674	0/0:27,0:27:43.77:0,44,701	0/0:24,0:23:60.18:0,60,742	1/1:4,17:21:57.09:569,57,0	1/1:2,21:23:63.14:641,63,0	1/1:1,11:11:33.08:336,33,0
chr10	17616169	.	AT	A	6195.39	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=16.011;DP=660;FS=3.897;HRun=5;HaplotypeScore=73.3983;InbreedingCoeff=0.9994;MQ=80.93;MQ0=0;MQRankSum=-4.833;QD=30.82;ReadPosRankSum=1.992;VQSLOD=5.6555;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,108,1459	1/1:0,11:11:33.09:372,33,0	0/0:29,0:29:48.39:0,48,864	0/0:17,0:17:23.06:0,23,402	1/1:4,27:31:72.18:804,72,0	0/0:19,0:19:54.17:0,54,721	0/0:21,0:21:63.16:0,63,826	0/0:19,0:19:48.14:0,48,628	0/0:22,0:22:59.17:0,59,818	1/1:1,32:33:99:1123,99,0	1/1:1,22:23:60.17:678,60,0	0/0:25,0:25:69.23:0,69,944	0/0:19,0:19:54.17:0,54,723	0/0:22,0:22:66.22:0,66,903	0/0:14,0:14:42.14:0,42,575	0/0:16,0:16:48.16:0,48,656	1/1:3,14:17:39.11:440,39,0	0/0:27,0:27:78.19:0,78,1027	0/0:26,0:26:75.25:0,75,1024	0/0:36,0:36:96.32:0,96,1313	0/0:22,0:22:60.20:0,60,820	0/0:29,0:29:84.28:0,84,1148	0/0:12,0:12:36.12:0,36,492	0/0:14,0:14:30.10:0,30,410	0/0:30,0:30:84.24:0,84,1111	1/1:1,23:24:69.20:781,69,0	1/1:1,35:36:99:1184,105,0	1/1:1,25:26:72.20:812,72,0
chr10	17617047	.	TG	T	355.41	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-0.390;DP=557;FS=0.000;HRun=4;HaplotypeScore=148.5430;InbreedingCoeff=0.9867;MQ=83.94;MQ0=2;MQRankSum=0.417;QD=22.21;ReadPosRankSum=-0.208;VQSLOD=2.1204;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:54.12:0,54,714	0/0:13,0:13:39.13:0,39,545	0/0:27,0:24:58.13:0,58,707	0/0:22,0:21:40.29:0,40,669	0/0:23,0:23:49.41:0,49,675	0/0:19,0:19:54.15:0,54,719	0/0:36,0:36:99:0,105,1470	0/0:33,1:34:45.23:0,45,1024	1/1:3,13:16:22.16:448,22,0	0/0:24,0:24:69.18:0,69,923	0/0:8,0:8:21.07:0,21,294	0/0:17,0:17:45.06:0,45,585	0/0:11,0:11:21.07:0,21,294	0/0:11,0:11:30.06:0,30,398	0/0:27,0:27:75.25:0,75,1046	0/0:21,0:21:63.20:0,63,862	0/0:17,0:17:48.12:0,48,649	0/0:26,0:26:72.24:0,72,1007	0/0:19,0:19:57.19:0,57,796	0/0:15,0:15:45.12:0,45,594	0/0:19,0:19:45.12:0,45,592	0/0:13,0:13:39.13:0,39,546	0/0:12,0:12:27.09:0,27,378	0/0:14,0:14:31.35:0,31,423	0/0:19,0:19:51.17:0,51,711	0/0:23,0:23:66.18:0,66,886	0/0:30,0:30:75.25:0,75,1050	0/0:21,0:21:63.17:0,63,859
chr10	17617069	.	TTG	T	3038.78	PASS	AB=0.954;AC=19;AF=0.339;AN=56;BaseQRankSum=3.785;DP=587;FS=20.722;HRun=0;HaplotypeScore=169.0482;InbreedingCoeff=0.6081;MQ=56.07;MQ0=17;MQRankSum=-5.235;QD=13.39;ReadPosRankSum=1.115;VQSLOD=2.0863;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:32:2.62:0,3,298	1/1:15,0:15:42.07:422,42,0	0/0:40,0:11:3.23:0,3,116	0/0:36,0:14:26.73:0,27,208	1/1:21,0:20:26.18:285,26,0	0/0:14,0:14:32.16:0,32,168	0/0:24,0:24:58.55:0,59,397	0/0:34,0:32:23.45:0,23,420	0/0:21,0:21:25.58:0,26,332	1/1:16,0:16:46.57:452,47,0	0/1:9,0:9:11.56:79,0,12	0/0:26,0:25:10.74:0,11,268	0/0:12,0:12:8.06:0,8,94	0/0:17,0:17:13.32:0,13,320	0/0:21,0:21:50.48:0,50,298	0/0:15,0:15:33.64:0,34,222	1/1:12,0:11:25.57:213,26,0	0/0:21,0:20:36.16:0,36,274	0/1:23,0:21:9.19:9,0,269	0/1:14,6:19:1.18:1,0,177	0/1:15,0:14:12.52:13,0,156	0/0:13,0:12:14.92:0,15,139	0/1:20,0:19:1.68:2,0,159	0/0:14,0:13:20.85:0,21,180	0/0:17,0:17:34.75:0,35,196	1/1:25,0:22:55.18:494,55,0	1/1:31,0:31:65.91:692,66,0	1/1:20,0:20:48.95:569,49,0
chr10	17617080	.	TTTTTTTTTTG	T	9075.70	PASS	AB=1.000;AC=26;AF=0.464;AN=56;BaseQRankSum=8.462;DP=647;FS=3.225;HRun=0;HaplotypeScore=236.9259;InbreedingCoeff=0.6134;MQ=46.04;MQ0=24;MQRankSum=-7.493;QD=29.00;ReadPosRankSum=6.216;VQSLOD=3.7754;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:37:53.79:0,54,1380	1/1:15,0:15:26.08:655,26,0	0/0:67,0:10:23.20:0,23,220	0/0:62,0:17:27.86:0,28,384	1/1:23,0:22:24.84:575,25,0	1/1:20,0:19:26.63:401,27,0	0/1:24,0:24:57.85:423,0,58	0/0:36,0:32:73.01:0,73,1744	0/1:17,0:17:5.20:5,0,1330	1/1:18,0:18:46.63:881,47,0	1/1:11,0:11:26.88:356,27,0	0/0:22,0:21:56.34:0,56,1381	0/0:10,0:10:17.23:0,17,398	0/0:10,0:10:26.85:0,27,854	0/1:20,0:20:5.93:520,0,6	0/1:13,0:13:19.12:314,0,19	1/1:18,0:17:23.63:326,24,0	0/1:20,0:19:99:351,0,105	0/0:20,0:17:45.75:0,46,1057	0/0:17,0:16:35.99:0,36,1125	0/0:16,0:15:36.41:0,36,987	0/0:13,0:12:14.27:0,14,613	0/0:22,0:21:38.31:0,38,1109	0/1:13,0:12:4.70:5,0,363	1/1:19,0:19:34.39:554,34,0	1/1:31,0:27:63.14:946,63,0	1/1:19,11:30:47.83:1349,48,0	1/1:21,0:21:60.15:1415,60,0
chr10	17617081	.	TTTTTTTTTG	T	6953.83	PASS	AB=1.000;AC=28;AF=0.500;AN=56;BaseQRankSum=9.610;DP=648;FS=3.227;HRun=0;HaplotypeScore=236.5217;InbreedingCoeff=0.4792;MQ=48.98;MQ0=23;MQRankSum=-5.491;QD=20.82;ReadPosRankSum=6.516;VQSLOD=3.7093;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:38:47.33:0,47,1125	1/1:7,8:15:26.25:501,26,0	0/0:69,0:12:14.38:0,14,204	0/0:63,0:18:29.24:0,29,347	1/1:12,11:22:17.71:308,18,0	1/1:20,0:19:9.44:324,9,0	0/1:23,0:23:80.78:376,0,81	0/0:35,0:31:61.84:0,62,1566	0/1:17,0:17:4.67:5,0,1141	1/1:10,9:19:44.83:694,45,0	1/1:8,3:11:28.04:227,28,0	0/0:22,0:21:21.01:0,21,1085	0/1:9,0:9:2.53:3,0,324	0/0:10,0:10:22.03:0,22,728	0/1:20,0:20:15.32:475,0,15	0/1:13,0:13:19.78:292,0,20	1/1:18,2:19:14.28:181,14,0	0/1:20,0:19:88.75:316,0,89	0/0:20,0:17:45.97:0,46,932	0/0:17,0:16:35.94:0,36,978	0/0:16,0:15:33.89:0,34,858	0/1:13,0:12:1.07:1,0,495	0/0:23,0:22:2.12:0,2,870	0/1:12,0:11:5.38:5,0,310	1/1:19,0:19:20.99:498,21,0	1/1:23,6:25:53.49:639,53,0	1/1:14,16:30:47.44:1048,47,0	1/1:5,16:21:56.86:1062,57,0
chr10	17617090	.	G	GTTT	3617.15	PASS	AB=0.918;AC=31;AF=0.554;AN=56;BaseQRankSum=-3.385;DP=635;FS=21.215;HRun=18;HaplotypeScore=192.0688;InbreedingCoeff=0.6426;MQ=53.73;MQ0=21;MQRankSum=-2.462;QD=9.42;ReadPosRankSum=-0.597;VQSLOD=-0.1955;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:34,0:35:58.27:484,58,0	1/1:11,0:11:7.86:94,8,0	0/0:64,0:14:21.61:0,22,270	0/1:62,0:18:7.19:7,0,131	1/1:22,0:21:27.01:428,27,0	0/0:21,0:20:37.67:0,38,208	0/0:20,0:20:27.67:0,28,248	0/0:33,0:30:39.48:0,39,734	0/1:15,0:15:25.73:26,0,111	1/1:21,0:21:25.71:476,26,0	1/1:15,0:15:29.21:426,29,0	1/1:18,2:19:18.45:234,18,0	0/1:8,0:8:2.75:95,0,3	1/1:11,0:11:6.42:69,6,0	0/0:21,0:21:42.49:0,42,257	0/0:14,0:14:22.18:0,22,137	0/1:6,13:19:5.51:40,0,6	0/0:19,0:18:27.12:0,27,199	0/0:21,0:18:25.34:0,25,370	0/1:16,0:15:4.30:4,0,187	0/0:17,0:16:14.27:0,14,328	1/1:9,0:12:11.70:49,12,0	1/1:25,1:25:49.33:397,49,0	1/1:6,4:10:4.74:50,5,0	0/0:20,0:20:9.61:0,10,159	1/1:28,0:24:23.50:460,23,0	1/1:29,0:29:11.41:99,11,0	1/1:20,0:20:10.77:180,11,0
chr10	17617092	.	TTTG	T	3032.26	PASS	AB=0.979;AC=27;AF=0.482;AN=56;BaseQRankSum=9.804;DP=627;FS=0.763;HRun=0;HaplotypeScore=182.6429;InbreedingCoeff=-0.0355;MQ=55.23;MQ0=21;MQRankSum=-7.941;QD=6.74;ReadPosRankSum=6.086;VQSLOD=2.4285;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:36,0:35:99:134,0,142	1/1:11,0:11:6.63:50,7,0	0/0:64,0:14:10.05:0,10,303	0/1:63,0:19:26.83:27,0,204	0/1:23,0:22:12.46:12,0,227	1/1:13,6:18:38.87:396,39,0	1/1:14,8:22:41.04:493,41,0	0/0:32,0:29:58.44:0,58,1197	0/1:14,1:15:52.05:52,0,196	0/1:22,0:22:60.92:61,0,90	0/0:15,0:15:6.52:0,7,176	0/1:19,0:18:14.68:15,0,202	0/0:8,0:8:5.64:0,6,92	0/1:9,0:9:6.25:6,0,126	1/1:7,10:17:38.96:463,39,0	1/1:8,4:12:21.50:238,22,0	0/1:20,0:19:4.16:4,0,47	0/1:10,5:14:1.90:308,0,2	0/0:23,0:20:42.18:0,42,618	0/0:18,0:17:16.14:0,16,476	0/0:17,0:16:7.56:0,8,539	0/1:13,0:12:19.68:20,0,106	0/1:25,0:24:62.97:136,0,63	0/1:11,0:10:13.55:14,0,65	1/1:9,10:19:50.87:526,51,0	0/1:29,0:25:60.44:60,0,148	0/1:30,0:30:4.51:100,0,5	0/1:20,0:20:10.19:94,0,10
chr10	17617095	.	G	GTT	2941.01	PASS	AB=1.000;AC=27;AF=0.482;AN=56;BaseQRankSum=0.107;DP=600;FS=14.402;HRun=9;HaplotypeScore=166.2652;InbreedingCoeff=0.8549;MQ=56.97;MQ0=20;MQRankSum=-4.490;QD=12.57;ReadPosRankSum=0.653;VQSLOD=0.1738;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:34,0:33:46.93:368,47,0	0/0:10,0:10:27.89:0,28,246	0/0:62,0:14:21.54:0,22,270	0/0:62,0:19:20.43:0,20,158	0/0:21,0:20:34.92:0,35,307	1/1:7,9:15:38.92:472,39,0	1/1:10,12:23:52.85:520,53,0	0/0:31,0:28:67.70:0,68,722	0/1:15,0:15:33.76:34,0,80	0/0:21,0:21:61.78:0,62,499	0/0:14,0:14:33.61:0,34,244	1/1:19,0:18:19.52:124,20,0	1/1:8,0:8:8.89:65,9,0	1/1:9,0:9:11.21:74,11,0	1/1:11,7:18:38.61:357,39,0	1/1:4,5:11:15.77:126,16,0	0/0:18,0:17:12.01:0,12,112	1/1:8,6:14:28.27:311,28,0	0/0:21,0:19:23.19:0,23,270	0/0:18,0:17:22.25:0,22,242	0/0:17,0:16:24.56:0,25,283	1/1:14,0:13:1.83:46,2,0	1/1:25,0:24:32.49:180,32,0	1/1:10,0:9:3.44:22,3,0	1/1:14,3:17:35.51:463,36,0	0/0:22,0:18:49.59:0,50,410	0/0:30,0:30:50.85:0,51,522	0/0:19,0:19:53.85:0,54,486
chr10	17618322	.	GT	G	1636.80	PASS	AB=0.971;AC=15;AF=0.268;AN=56;BaseQRankSum=-9.335;DP=559;FS=3.404;HRun=13;HaplotypeScore=108.3369;InbreedingCoeff=0.8465;MQ=64.17;MQ0=9;MQRankSum=1.797;QD=9.80;ReadPosRankSum=6.347;VQSLOD=2.9901;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:16,28:46:90.98:736,91,0	0/0:4,0:4:5.80:0,6,34	0/1:33,1:15:25.83:26,0,57	0/0:26,0:17:25.14:0,25,192	0/0:17,0:17:35.07:0,35,221	0/0:7,0:18:23.33:0,23,143	0/0:8,0:26:26.04:0,26,129	0/0:24,0:24:47.73:0,48,403	0/0:19,1:21:31.93:0,32,431	0/0:32,0:30:60.37:0,60,319	0/0:18,0:17:30.34:0,30,184	1/1:3,13:17:28.72:203,29,0	1/1:5,9:14:23.81:175,24,0	1/1:3,12:16:8.31:175,8,0	0/0:3,0:7:8.36:0,8,40	0/0:4,0:14:18.22:0,18,105	0/0:33,0:33:54.60:0,55,338	0/0:9,0:20:16.88:0,17,92	0/0:21,0:21:35.69:0,36,305	0/0:15,0:15:29.95:0,30,254	0/0:17,2:18:11.06:0,11,258	1/1:1,5:6:11.92:88,12,0	1/1:3,9:12:27.69:196,28,0	1/1:6,13:22:35.87:233,36,0	0/0:6,0:13:20.28:0,20,125	0/0:29,0:29:55.07:0,55,297	0/0:22,0:22:17.75:0,18,126	0/0:9,0:8:14.74:0,15,103
chr10	17618468	.	C	CTT	3100.96	PASS	AB=0.619;AC=34;AF=0.607;AN=56;BaseQRankSum=7.842;DP=477;FS=15.671;HRun=12;HaplotypeScore=82.2041;InbreedingCoeff=0.5440;MQ=66.82;MQ0=1;MQRankSum=-0.278;QD=8.78;ReadPosRankSum=-1.511;VQSLOD=-0.0250;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:11,1:39:21.50:173,22,0	1/1:2,2:9:9.02:99,9,0	0/0:16,0:10:9.66:0,10,79	0/0:9,0:6:8.99:0,9,80	1/1:7,2:18:39.41:356,39,0	0/0:16,0:18:40.66:0,41,393	0/0:14,0:14:38.78:0,39,345	1/1:15,1:37:19.08:214,19,0	0/1:6,2:13:6.74:105,0,7	1/1:6,2:21:36:333,36,0	1/1:1,2:17:27.83:191,28,0	0/1:8,0:16:27.26:44,0,27	1/1:4,0:11:10.23:38,10,0	1/1:4,0:15:19.96:69,20,0	0/0:15,0:15:23.66:0,24,201	0/0:12,0:12:30.01:0,30,277	1/1:6,12:19:27.09:379,27,0	0/0:22,0:23:41.75:0,42,434	1/1:4,0:17:3.60:67,4,0	1/1:4,1:18:18.72:132,19,0	0/1:4,0:9:18.57:19,0,40	0/1:2,0:7:12.83:26,0,13	0/1:3,0:12:4.79:44,0,5	0/1:4,0:15:4.81:45,0,5	0/0:15,0:16:44.78:0,45,400	1/1:4,3:24:55.41:495,55,0	1/1:7,1:18:14.76:127,15,0	1/1:6,3:17:34.15:346,34,0
chr10	17621018	.	AAT	A	1910.08	PASS	AB=0.986;AC=21;AF=0.375;AN=56;BaseQRankSum=5.322;DP=473;FS=1.794;HRun=0;HaplotypeScore=80.3288;InbreedingCoeff=0.3416;MQ=62.68;MQ0=9;MQRankSum=3.932;QD=8.06;ReadPosRankSum=1.001;VQSLOD=3.4478;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:24:50.85:0,51,657	1/1:8,1:9:19.71:115,20,0	0/1:12,0:8:0.59:1,0,111	0/0:9,0:9:23.81:0,24,254	0/1:21,1:21:2.48:207,0,2	0/1:17,0:14:51.25:51,0,96	0/1:14,0:14:77.16:77,0,80	0/0:28,0:27:72.57:0,73,978	0/0:19,0:17:35.96:0,36,376	0/1:20,2:22:1.08:283,0,1	1/1:20,0:19:28.45:219,28,0	0/0:19,0:18:36.03:0,36,517	0/0:12,0:12:23.95:0,24,307	0/0:13,0:13:30.03:0,30,482	0/1:14,0:11:35.90:36,0,74	0/1:9,0:9:34.59:35,0,64	1/1:18,2:19:28.45:319,28,0	0/1:9,0:8:11.96:72,0,12	0/0:17,0:16:38.10:0,38,502	0/0:23,0:23:55.87:0,56,736	0/0:19,0:18:35.91:0,36,463	0/0:11,0:11:26.91:0,27,316	0/0:18,0:18:43.44:0,43,567	0/0:23,0:22:57.09:0,57,858	0/1:16,0:16:97.91:115,0,98	1/1:19,1:19:6.93:244,7,0	1/1:14,1:15:3.34:96,3,0	1/1:15,3:17:2.19:222,2,0
chr10	17621019	.	AT	A	4332.34	PASS	AB=0.867;AC=29;AF=0.518;AN=56;BaseQRankSum=2.237;DP=434;FS=6.687;HRun=1;HaplotypeScore=62.6914;InbreedingCoeff=0.9189;MQ=65.53;MQ0=9;MQRankSum=2.533;QD=20.44;ReadPosRankSum=-0.407;VQSLOD=4.4675;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:38.41:0,38,396	1/1:1,7:8:21:262,21,0	0/1:11,0:9:7.03:7,0,68	0/0:9,0:9:23.81:0,24,216	1/1:3,17:19:44.04:472,44,0	1/1:12,1:12:11.47:134,11,0	1/1:11,2:13:16.36:189,16,0	0/0:28,0:27:69.12:0,69,750	0/0:15,0:14:29.92:0,30,240	1/1:9,11:20:52.55:578,53,0	1/1:4,15:18:41.27:389,41,0	0/0:16,0:16:39:0,39,416	0/0:11,0:11:25.54:0,26,249	0/0:12,0:12:28.53:0,29,344	1/1:12,1:12:13.42:122,13,0	1/1:8,0:8:12.62:95,13,0	1/1:12,8:19:53.73:531,54,0	1/1:9,0:8:12.05:94,12,0	0/0:18,0:18:45.96:0,46,429	0/0:23,0:23:58.03:0,58,575	0/0:19,0:19:33.42:0,33,336	0/0:12,0:12:30.13:0,30,281	0/0:17,0:17:46.38:0,46,440	0/0:21,0:20:52.73:0,53,612	1/1:10,1:11:24.45:211,24,0	1/1:7,8:15:42.02:482,42,0	1/1:1,11:12:21:262,21,0	1/1:4,14:17:15.57:505,16,0
chr10	17621146	.	A	AG	12685.73	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=0.633;DP=576;FS=5.354;HRun=2;HaplotypeScore=61.8409;InbreedingCoeff=0.9794;MQ=48.70;MQ0=7;MQRankSum=-3.990;QD=29.78;ReadPosRankSum=2.457;VQSLOD=4.2755;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,22:23:33.06:437,33,0	1/1:0,11:11:33.11:475,33,0	0/0:21,0:4:11.97:0,12,108	0/0:23,0:3:8.99:0,9,93	1/1:1,18:19:27.09:389,27,0	1/1:2,21:21:45.15:644,45,0	1/1:1,15:16:42.10:580,42,0	0/0:29,0:27:75.24:0,75,929	1/1:1,18:18:45.15:647,45,0	1/1:2,23:25:69.22:959,69,0	1/1:0,14:14:24.04:322,24,0	1/1:0,20:20:54.18:776,54,0	1/1:1,14:15:30.10:429,30,0	1/1:0,10:9:21.07:302,21,0	1/1:0,15:12:36.03:471,36,0	1/1:1,18:19:51.17:726,51,0	1/1:4,15:18:33.10:444,33,0	1/1:1,27:25:41.34:600,41,0	0/0:18,0:12:33.09:0,33,387	0/0:33,0:33:90.27:0,90,1101	0/0:26,0:26:72.23:0,72,892	1/1:3,22:24:27.09:383,27,0	1/1:0,23:23:42.14:603,42,0	1/1:1,17:18:45.15:635,45,0	1/1:1,16:17:36.12:518,36,0	1/1:0,28:27:78.25:1098,78,0	1/1:0,20:20:57.19:815,57,0	1/1:1,15:16:30.10:431,30,0
chr10	17621357	.	GT	G	3929.76	PASS	AB=0.954;AC=19;AF=0.339;AN=56;BaseQRankSum=2.150;DP=673;FS=0.347;HRun=11;HaplotypeScore=80.7867;InbreedingCoeff=0.7642;MQ=66.97;MQ0=10;MQRankSum=-2.377;QD=13.23;ReadPosRankSum=1.982;VQSLOD=3.8639;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:34:60.20:0,60,318	1/1:1,7:8:17.97:148,18,0	0/1:38,0:19:13.51:14,0,123	0/1:25,1:14:8.09:8,0,93	1/1:5,17:22:47.92:394,48,0	0/0:26,0:26:63.15:0,63,666	0/0:17,0:17:42.08:0,42,436	0/0:36,2:35:22.52:0,23,597	0/0:4,0:23:45.81:0,46,250	1/1:11,29:39:65.01:683,65,0	1/1:8,21:29:21.87:387,22,0	0/0:2,0:11:22.76:0,23,114	0/0:1,0:9:8.59:0,9,43	0/0:6,0:13:17.24:0,17,97	0/0:16,0:16:42.10:0,42,442	0/0:26,0:25:63.12:0,63,644	1/1:2,22:24:37.31:402,37,0	0/0:23,0:24:53.54:0,54,602	0/1:15,2:18:13.36:13,0,256	0/0:24,0:24:38.25:0,38,442	0/0:14,0:14:31.56:0,32,349	0/0:11,0:28:48.71:0,49,271	0/0:5,0:22:45.81:0,46,258	0/0:2,0:24:51.17:0,51,256	0/0:26,1:27:41.52:0,42,645	1/1:5,32:37:95.51:766,96,0	1/1:3,24:27:56.91:468,57,0	1/1:2,26:28:80.76:647,81,0
chr10	17626335	.	C	CA	851.03	PASS	AB=0.882;AC=33;AF=0.589;AN=56;BaseQRankSum=0.308;DP=250;FS=1.990;HRun=16;HaplotypeScore=47.2611;InbreedingCoeff=0.2105;MQ=47.37;MQ0=17;MQRankSum=-2.044;QD=4.32;ReadPosRankSum=-1.461;VQSLOD=0.3640;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:8,2:8:32.77:33,0,33	1/1:3,0:4:2.84:14,3,0	0/1:11,0:7:11.01:11,0,26	0/1:9,0:4:0.53:5,0,1	1/1:6,1:9:13.50:65,13,0	0/0:8,0:8:5.59:0,6,32	0/0:5,0:5:5.80:0,6,33	0/1:16,5:20:13.15:95,0,13	0/0:4,0:12:12.16:0,12,35	1/1:5,0:5:5.74:30,6,0	1/1:8,0:9:2.94:19,3,0	0/1:7,1:8:4.68:49,0,5	1/1:1,1:2:5.98:46,6,0	0/0:3,0:3:2.71:0,3,13	0/1:7,0:6:11.33:11,0,28	0/0:5,0:7:7.43:0,7,29	1/1:9,0:12:23.71:118,24,0	0/0:13,0:12:5.45:0,5,32	0/1:8,1:7:10.65:13,0,11	1/1:0,5:6:15.79:113,16,0	0/0:4,0:4:2.03:0,2,6	1/1:2,3:6:9.29:57,9,0	1/1:0,3:3:2.99:24,3,0	0/1:3,1:5:7.70:39,0,8	0/1:6,1:7:2.90:3,0,62	1/1:12,0:10:11.61:69,12,0	1/1:11,0:9:11.29:66,11,0	1/1:11,1:15:25.75:138,26,0
chr10	17626371	.	C	CATATATAT	3088.82	PASS	AB=0.746;AC=33;AF=0.750;AN=44;BaseQRankSum=-2.041;DP=167;FS=1.641;HRun=0;HaplotypeScore=70.6361;InbreedingCoeff=0.1493;MQ=74.67;MQ0=2;MQRankSum=-1.957;QD=26.18;ReadPosRankSum=1.929;VQSLOD=3.0244;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:4,0:7:3.61:90,0,4	./.	0/0:7,0:7:2.98:0,3,22	0/0:18,0:13:1.55:0,2,4	1/1:8,0:8:3.01:49,3,0	1/1:6,0:6:11.99:155,12,0	1/1:2,1:3:6.02:158,6,0	1/1:19,0:17:23.22:479,23,0	0/0:4,0:5:2.99:0,3,24	./.	1/1:4,3:7:9.03:326,9,0	0/1:4,0:6:9.63:19,0,10	0/1:0,0:2:9.62:19,0,10	1/1:0,0:1:3.01:64,3,0	./.	0/1:3,0:3:0:0,0,0	1/1:7,2:9:9.03:292,9,0	1/1:3,0:5:12.04:367,12,0	1/1:9,0:9:6.01:114,6,0	./.	./.	./.	1/1:2,0:3:3.01:65,3,0	1/1:1,0:2:0.47:1,0,0	1/1:5,0:5:3.01:88,3,0	1/1:2,1:3:3.01:125,3,0	0/1:5,2:7:23.79:467,0,24	1/1:9,2:11:9.03:326,9,0
chr10	17626418	.	TACACAC	T	1236.22	PASS	AB=0.700;AC=21;AF=0.420;AN=50;BaseQRankSum=-0.875;DP=246;FS=0.000;HRun=0;HaplotypeScore=62.0653;InbreedingCoeff=0.6077;MQ=52.30;MQ0=17;MQRankSum=-2.829;QD=12.74;ReadPosRankSum=0.326;VQSLOD=1.9608;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:12:18.06:0,18,500	1/1:0,2:2:6.02:122,6,0	./.	./.	1/1:4,1:5:6.49:122,6,0	0/0:2,0:6:15.05:0,15,197	0/0:2,0:7:12.04:0,12,159	0/0:20,0:19:9.03:0,9,114	0/0:4,0:4:3.01:0,3,93	1/1:10,1:12:10.31:157,10,0	1/1:7,0:8:3.01:42,3,0	0/0:3,0:3:3.01:0,3,43	0/0:5,0:5:6.02:0,6,141	0/0:3,0:3:6.02:0,6,140	0/0:4,0:7:15.02:0,15,185	0/0:0,0:1:3.01:0,3,38	1/1:8,1:9:3.01:61,3,0	0/0:6,0:8:9.03:0,9,115	./.	1/1:6,6:12:12.04:220,12,0	1/1:12,0:12:6.49:90,6,0	0/0:3,0:5:12.04:0,12,324	0/0:7,0:8:12.04:0,12,319	0/0:8,0:10:18.02:0,18,503	0/1:4,1:7:45.83:46,0,109	1/1:6,6:13:18.03:307,18,0	1/1:6,3:9:9.03:183,9,0	1/1:7,1:8:2.05:59,2,0
chr10	17626971	.	GT	G	4015.59	PASS	AB=0.522;AC=11;AF=0.196;AN=56;BaseQRankSum=14.130;DP=634;FS=6.835;HRun=3;HaplotypeScore=78.9615;InbreedingCoeff=0.8946;MQ=79.37;MQ0=0;MQRankSum=-3.892;QD=33.19;ReadPosRankSum=2.550;VQSLOD=4.1536;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,99,1407	0/0:11,0:11:30.10:0,30,431	0/0:29,0:28:81.24:0,81,1139	0/0:29,0:26:47.34:0,47,924	0/0:29,0:29:87.28:0,87,1236	1/1:3,21:24:54.17:669,54,0	1/1:0,21:21:60.19:743,60,0	0/0:27,0:27:75.25:0,75,1080	0/0:20,0:20:57.19:0,57,813	0/0:25,0:25:75.23:0,75,1033	0/0:21,0:21:63.20:0,63,889	0/0:16,0:16:48.15:0,48,673	0/0:20,0:20:60.20:0,60,863	0/0:25,0:25:72.24:0,72,1037	1/1:0,25:25:66.21:818,66,0	0/1:1,11:12:7.10:373,0,7	0/0:23,0:23:60.20:0,60,864	1/1:0,18:18:54.17:668,54,0	0/0:18,0:18:54.17:0,54,763	0/0:29,0:29:87.28:0,87,1233	0/0:29,0:29:81.23:0,81,1138	0/0:19,0:19:51.17:0,51,733	0/0:28,0:28:84.26:0,84,1172	0/0:28,0:28:84.28:0,84,1209	1/1:0,21:21:60.19:744,60,0	0/0:20,0:19:60.19:0,60,848	0/0:30,0:30:90.27:0,90,1255	0/0:3,0:3:9.03:0,9,129
chr10	17630371	.	T	TCC	4047.33	PASS	AB=0.875;AC=37;AF=0.661;AN=56;BaseQRankSum=-2.157;DP=399;FS=2.958;HRun=9;HaplotypeScore=57.6433;InbreedingCoeff=0.7854;MQ=78.50;MQ0=1;MQRankSum=-0.257;QD=16.66;ReadPosRankSum=-1.168;VQSLOD=1.3790;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,3:24:18.04:207,18,0	1/1:1,4:6:11.53:145,12,0	0/0:23,0:23:11.13:0,11,194	0/0:16,0:14:1.25:0,1,69	1/1:3,12:18:26.02:306,26,0	0/0:11,0:11:33.08:0,33,351	0/0:24,0:24:60.13:0,60,638	0/1:18,2:21:5.44:216,0,5	0/0:2,0:19:41.16:0,41,179	1/1:3,4:7:12.04:185,12,0	1/1:1,6:7:15.01:204,15,0	1/1:4,3:9:11.52:113,12,0	1/1:6,4:10:3.01:46,3,0	1/1:3,0:9:15.03:153,15,0	0/0:20,0:20:45.05:0,45,470	0/0:16,0:16:45.11:0,45,479	1/1:5,17:27:52.12:680,52,0	0/0:15,0:16:44.84:0,45,459	1/1:7,9:17:35.54:444,36,0	1/1:6,10:17:18.06:276,18,0	1/1:4,10:16:20.52:286,21,0	1/1:2,1:7:9.02:104,9,0	1/1:5,0:5:3.01:46,3,0	1/1:4,1:16:12.02:132,12,0	0/0:10,0:10:30.08:0,30,319	1/1:3,5:8:9.03:138,9,0	1/1:1,6:14:28.04:311,28,0	1/1:0,3:4:5.51:55,6,0
chr10	17630624	.	GA	G	2125.83	PASS	AB=0.753;AC=36;AF=0.643;AN=56;BaseQRankSum=6.567;DP=454;FS=0.000;HRun=14;HaplotypeScore=108.3021;InbreedingCoeff=0.4131;MQ=56.42;MQ0=3;MQRankSum=-0.350;QD=6.48;ReadPosRankSum=3.957;VQSLOD=2.7488;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,2:39:28.90:0,29,542	1/1:2,1:11:19.24:68,19,0	0/0:7,0:4:5.84:0,6,42	0/0:4,0:4:6.05:0,6,29	1/1:6,0:20:19.99:58,20,0	1/1:3,12:16:3.90:163,4,0	1/1:8,24:31:40.57:424,41,0	0/1:6,14:20:11.26:218,0,11	0/1:15,3:19:19.41:19,0,234	1/1:6,0:16:18.29:53,18,0	1/1:5,0:12:6.68:21,7,0	0/0:13,1:14:3.19:0,3,141	0/0:16,1:16:3.40:0,3,161	0/1:14,1:15:8.20:8,0,199	1/1:4,10:14:31.75:210,32,0	1/1:4,9:15:26.94:174,27,0	1/1:1,0:14:20.37:59,20,0	1/1:4,7:14:28.97:167,29,0	0/1:9,7:17:33.42:122,0,33	1/1:0,7:11:26.93:162,27,0	1/1:1,7:9:17.83:123,18,0	0/1:13,3:17:17.33:17,0,109	0/0:13,1:16:3.24:0,3,152	0/0:24,2:27:5.98:0,6,356	1/1:5,6:11:14.81:103,15,0	1/1:11,1:18:15.12:56,15,0	1/1:3,0:23:25.34:77,25,0	0/1:1,0:3:1.04:1,0,9
chr10	17633367	.	A	AAAC	17136.53	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=13.007;DP=423;FS=15.539;HRun=0;HaplotypeScore=169.0708;InbreedingCoeff=0.9322;MQ=90.41;MQ0=2;MQRankSum=-13.219;QD=49.24;ReadPosRankSum=5.195;VQSLOD=5.0735;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,19:21:59.14:994,59,0	1/1:4,4:8:15.03:258,15,0	0/0:22,0:22:66:0,66,1099	0/0:24,0:24:72.25:0,72,1321	1/1:1,12:13:32.95:632,33,0	1/1:1,13:14:42.14:789,42,0	1/1:1,11:12:33.07:602,33,0	1/1:1,8:9:27.09:528,27,0	0/0:29,0:29:87.27:0,87,1560	1/1:5,19:23:59.86:1127,60,0	1/1:0,9:9:27.09:518,27,0	1/1:0,15:15:45.15:873,45,0	1/1:1,11:12:36.12:691,36,0	1/1:1,16:17:48.16:917,48,0	1/1:5,17:22:59.78:1081,60,0	1/1:4,16:20:54.18:1062,54,0	1/1:3,6:9:24.08:462,24,0	1/1:2,9:11:27.05:474,27,0	1/1:4,7:11:30.09:554,30,0	1/1:2,8:10:27.05:482,27,0	1/1:3,11:13:28.04:521,28,0	1/1:3,11:15:42.09:732,42,0	1/1:2,8:10:24.04:419,24,0	1/1:2,17:18:44.02:765,44,0	1/1:3,13:16:45.08:771,45,0	1/1:3,18:21:57.19:1108,57,0	1/1:0,13:13:39.09:717,39,0	1/1:0,1:1:3.01:59,3,0
chr10	17633368	.	T	TCTGG	25700.47	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=10.896;DP=525;FS=26.294;HRun=0;HaplotypeScore=204.3596;InbreedingCoeff=0.9770;MQ=82.25;MQ0=2;MQRankSum=-12.933;QD=57.11;ReadPosRankSum=3.531;VQSLOD=3.7310;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,19:27:63.82:1333,64,0	1/1:6,4:10:30.07:592,30,0	0/0:21,0:21:50.32:0,50,962	0/0:25,0:25:68.89:0,69,1221	1/1:6,12:18:45.14:955,45,0	1/1:7,13:20:41.48:1059,41,0	1/1:9,11:20:51.13:1104,51,0	1/1:11,8:19:48.16:1099,48,0	0/0:29,0:29:87.28:0,87,1646	1/1:8,19:27:81.26:1788,81,0	1/1:3,9:12:33.11:742,33,0	1/1:3,15:18:54.14:1175,54,0	1/1:1,11:12:20.23:732,20,0	1/1:8,16:24:66.21:1420,66,0	1/1:9,17:28:84.22:1755,84,0	1/1:5,16:21:61.73:1293,62,0	1/1:7,6:13:36.09:788,36,0	1/1:5,9:14:30.99:668,31,0	1/1:11,7:20:51.18:1156,51,0	1/1:1,8:11:27.05:561,27,0	1/1:10,11:21:47.94:971,48,0	1/1:2,11:14:42.14:929,42,0	1/1:6,8:14:39.13:861,39,0	1/1:5,17:22:48.84:1102,49,0	1/1:4,12:17:45.14:944,45,0	1/1:7,18:25:56.95:1528,57,0	1/1:2,12:15:42.14:935,42,0	1/1:2,1:3:9.03:209,9,0
chr10	17633914	.	TAAAA	T	3585.14	PASS	AB=0.666;AC=43;AF=0.768;AN=56;BaseQRankSum=0.482;DP=279;FS=2.811;HRun=17;HaplotypeScore=69.1456;InbreedingCoeff=0.2561;MQ=45.19;MQ0=24;MQRankSum=1.898;QD=14.34;ReadPosRankSum=3.606;VQSLOD=0.0800;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,11:16:32.87:418,33,0	0/1:3,0:5:10.30:15,0,10	0/0:10,0:5:7:0,7,148	0/0:10,0:5:7.47:0,7,71	1/1:3,1:11:19.65:89,20,0	1/1:4,16:17:39.06:474,39,0	0/1:2,2:5:36.87:87,0,37	0/1:14,0:16:79.93:80,0,84	0/0:4,0:6:18.06:0,18,294	0/1:7,0:10:14.37:38,0,14	1/1:3,0:9:11.15:84,11,0	1/1:1,2:3:9.03:113,9,0	1/1:2,7:9:17.95:207,18,0	0/0:1,0:1:0:0,0,0	1/1:1,7:8:21.03:266,21,0	1/1:2,2:4:8.96:95,9,0	1/1:10,0:16:13.04:92,13,0	1/1:3,9:12:17.87:228,18,0	1/1:7,0:14:22.48:128,22,0	1/1:2,0:2:2.79:13,3,0	1/1:1,0:5:10.44:44,10,0	1/1:0,2:2:3.01:38,3,0	1/1:0,7:9:26.93:304,27,0	1/1:0,1:1:3.01:38,3,0	1/1:0,14:14:39.12:494,39,0	1/1:7,0:13:3.28:117,3,0	1/1:6,0:11:0.45:63,0,0	0/1:3,1:10:14.55:62,0,15
chr10	17634615	.	AG	A	13765.66	PASS	AB=0.938;AC=51;AF=0.911;AN=56;BaseQRankSum=0.509;DP=573;FS=9.539;HRun=4;HaplotypeScore=75.6893;InbreedingCoeff=0.7975;MQ=81.36;MQ0=0;MQRankSum=-2.383;QD=26.37;ReadPosRankSum=4.306;VQSLOD=3.6700;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,38:44:63.50:999,63,0	1/1:2,5:7:16.07:155,16,0	0/0:23,1:24:22.17:0,22,430	0/1:13,0:14:9.13:9,0,164	1/1:5,17:22:47.97:631,48,0	1/1:1,18:19:51.13:597,51,0	1/1:0,23:23:48.15:574,48,0	1/1:2,23:25:63.65:704,64,0	0/0:27,0:27:72.19:0,72,938	1/1:3,22:25:53.82:737,54,0	1/1:6,14:20:52.56:605,53,0	1/1:4,14:18:29.13:388,29,0	1/1:1,17:18:42.13:502,42,0	1/1:0,17:17:48.15:574,48,0	1/1:2,14:16:30.09:359,30,0	1/1:3,19:22:54.14:632,54,0	1/1:3,25:28:66.18:774,66,0	1/1:3,19:22:51.13:596,51,0	1/1:2,19:21:53.73:598,54,0	1/1:3,12:15:37:431,37,0	1/1:1,21:22:45.14:534,45,0	1/1:2,15:17:38.92:386,39,0	1/1:1,15:16:35.20:428,35,0	1/1:1,20:21:55.40:709,55,0	1/1:0,10:10:21.06:251,21,0	1/1:2,22:24:63.69:730,64,0	1/1:0,23:23:54.16:646,54,0	1/1:1,11:12:18.06:215,18,0
chr10	17634618	.	GGA	G	1320.57	PASS	AB=0.988;AC=39;AF=0.696;AN=56;BaseQRankSum=8.787;DP=566;FS=7.328;HRun=0;HaplotypeScore=127.1780;InbreedingCoeff=-0.0216;MQ=77.06;MQ0=0;MQRankSum=-4.479;QD=2.54;ReadPosRankSum=7.529;VQSLOD=0.9752;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:45,0:45:49.38:49,0,94	0/1:6,1:7:11.57:36,0,12	0/0:22,0:22:51.11:0,51,564	0/1:12,0:11:0.70:1,0,223	0/1:25,0:25:40.51:41,0,65	1/1:18,1:19:22.95:92,23,0	1/1:23,0:23:19.94:43,20,0	0/1:26,0:26:4.29:171,0,4	0/0:25,0:25:75.21:0,75,1342	0/1:25,1:26:19.60:93,0,20	1/1:19,1:20:10.04:119,10,0	0/1:17,0:17:3.89:13,0,4	1/1:17,0:17:17.08:37,17,0	0/1:18,0:18:10.27:20,0,10	0/1:16,0:16:8.75:9,0,41	1/1:20,1:21:2.09:69,2,0	1/1:25,0:25:28.45:84,28,0	1/1:20,1:21:22.59:91,23,0	0/1:20,0:20:33.43:50,0,33	0/1:16,0:16:9.54:46,0,10	1/1:21,0:21:16.78:37,17,0	1/1:15,1:16:23.35:147,23,0	1/1:16,0:16:13.14:29,13,0	0/1:22,0:22:16.62:23,0,17	1/1:10,0:10:8:18,8,0	0/1:24,0:24:12.71:104,0,13	1/1:23,0:23:22.07:49,22,0	1/1:12,0:12:7.48:16,7,0
chr10	17635092	.	A	ATGGAGG	30069.45	PASS	AB=0.667;AC=49;AF=0.875;AN=56;BaseQRankSum=-5.261;DP=539;FS=1.132;HRun=0;HaplotypeScore=113.2960;InbreedingCoeff=0.8055;MQ=79.25;MQ0=0;MQRankSum=-11.764;QD=63.17;ReadPosRankSum=3.013;VQSLOD=5.3896;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,25:37:63.22:2105,63,0	1/1:4,4:8:18.06:549,18,0	0/0:19,0:19:56.45:0,56,982	0/0:21,0:21:42.14:0,42,954	1/1:6,16:23:27.05:845,27,0	1/1:3,6:10:21.07:714,21,0	1/1:7,19:28:60.20:1947,60,0	1/1:7,20:27:66.23:1802,66,0	0/0:23,0:23:69.24:0,69,1552	1/1:4,17:21:48.16:1531,48,0	1/1:2,7:9:12.04:416,12,0	1/1:2,18:21:39.13:1353,39,0	1/1:4,12:16:48.15:1449,48,0	1/1:3,23:27:60.21:2015,60,0	1/1:3,19:22:48.16:1657,48,0	0/1:7,6:14:91.36:692,0,91	1/1:6,16:24:51.17:1665,51,0	1/1:6,9:15:33.11:1060,33,0	1/1:9,13:26:63.20:1878,63,0	1/1:0,7:7:15.05:521,15,0	1/1:8,12:23:12.28:367,12,0	1/1:0,12:13:21.07:661,21,0	1/1:3,8:12:13.79:519,14,0	1/1:2,19:22:45.01:1561,45,0	1/1:3,12:16:30.10:1041,30,0	1/1:2,12:18:48.12:1379,48,0	1/1:1,22:25:44.78:1558,45,0	1/1:4,6:12:24.08:785,24,0
chr10	17636013	.	CTTG	C	5983.84	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-8.390;DP=608;FS=3.217;HRun=0;HaplotypeScore=161.4787;InbreedingCoeff=0.9958;MQ=76.27;MQ0=0;MQRankSum=-2.912;QD=38.61;ReadPosRankSum=3.176;VQSLOD=5.6883;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,157,3407	1/1:0,5:5:15.05:240,15,0	0/0:17,0:17:45.11:0,45,924	0/0:13,0:13:38.72:0,39,740	1/1:0,22:22:45.15:723,45,0	0/0:21,0:21:60.17:0,60,1224	0/0:20,0:20:57.20:0,57,1259	0/0:25,0:25:57.20:0,57,1246	0/0:19,0:19:54.19:0,54,1153	1/1:2,16:18:48.16:769,48,0	1/1:0,18:18:39.09:598,39,0	0/0:28,0:28:84.29:0,84,1815	0/0:21,0:21:57.20:0,57,1215	0/0:18,0:18:51.18:0,51,1126	0/0:23,0:22:66.21:0,66,1416	0/0:25,0:24:72.23:0,72,1526	1/1:0,31:31:81.19:1244,81,0	0/0:21,0:21:57.18:0,57,1189	0/0:18,0:18:39.13:0,39,842	0/0:14,0:14:42.14:0,42,927	0/0:37,0:37:99:0,99,2123	0/0:15,0:15:36.12:0,36,793	0/0:17,0:17:51.17:0,51,1089	0/0:36,0:35:99:0,105,2304	0/0:11,0:11:27.09:0,27,596	1/1:0,20:20:54.18:867,54,0	1/1:4,28:32:78.27:1253,78,0	1/1:2,7:9:18.06:289,18,0
chr10	17636345	.	T	TGCATTTCAGAAGTA	40546.58	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-7.571;DP=489;FS=30.597;HRun=0;HaplotypeScore=116.9507;InbreedingCoeff=0.6871;MQ=87.81;MQ0=0;MQRankSum=-10.185;QD=92.57;ReadPosRankSum=5.462;VQSLOD=2.5829;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,8:29:27.09:1877,27,0	1/1:3,0:3:6.02:97,6,0	0/0:32,0:32:80.41:0,80,2427	0/0:18,0:19:53.24:0,53,1663	1/1:2,3:13:9.03:467,9,0	1/1:0,5:15:15.05:1065,15,0	1/1:1,13:31:39.13:2729,39,0	1/1:1,1:34:99:5905,99,0	1/1:1,15:30:45.15:3193,45,0	1/1:0,5:13:36.10:1797,36,0	1/1:10,0:10:30.10:1214,30,0	1/1:0,7:19:21.07:1489,21,0	1/1:2,8:17:27.09:1914,27,0	1/1:3,9:26:27.09:1916,27,0	1/1:1,7:23:21.07:1490,21,0	1/1:0,3:9:9.03:639,9,0	1/1:0,5:19:15.05:1065,15,0	1/1:0,3:8:9.03:636,9,0	1/1:1,3:19:57.15:2354,57,0	1/1:0,6:16:27.09:1657,27,0	1/1:16,6:22:54.12:2507,54,0	1/1:1,1:8:3.01:213,3,0	1/1:0,2:6:6.02:401,6,0	1/1:1,8:18:18.06:1023,18,0	1/1:0,2:8:6.02:426,6,0	1/1:2,7:20:44.93:2131,45,0	1/1:1,8:20:27.56:1917,28,0	1/1:2,0:2:6.02:427,6,0
chr10	17636529	.	GAC	G	991.61	PASS	AB=0.975;AC=31;AF=0.596;AN=52;BaseQRankSum=1.286;DP=488;FS=7.160;HRun=0;HaplotypeScore=122.6321;InbreedingCoeff=0.2891;MQ=49.49;MQ0=20;MQRankSum=0.464;QD=4.13;ReadPosRankSum=-3.011;VQSLOD=1.5986;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:10,1:11:2.04:0,2,6	0/1:7,0:7:9.16:61,0,9	0/0:48,0:19:35.47:0,35,473	0/0:104,0:31:35.44:0,35,510	1/1:16,0:16:11.59:98,12,0	1/1:10,3:12:5.36:34,5,0	1/1:6,1:6:2.97:20,3,0	0/1:23,0:23:7.08:7,0,435	0/0:21,0:21:51.14:0,51,900	0/1:13,1:13:2.96:107,0,3	1/1:10,2:11:11.98:98,12,0	1/1:6,1:5:3.01:42,3,0	0/1:10,0:10:9.97:10,0,27	0/0:5,0:5:0.88:0,1,2	./.	./.	1/1:4,0:4:2.96:19,3,0	1/1:12,1:12:22.71:164,23,0	0/1:17,0:17:19.85:20,0,332	0/0:26,0:26:13.37:0,13,295	0/1:27,0:27:0.38:0,0,179	0/1:15,2:17:12.37:52,0,12	1/1:11,0:10:3.99:47,4,0	0/0:16,0:14:2.63:0,3,18	1/1:10,0:10:2.99:25,3,0	1/1:12,2:12:21.35:172,21,0	1/1:7,0:7:8.31:54,8,0	1/1:11,0:10:13.49:122,13,0
chr10	17636531	.	CAGAGAGACAG	C	2303.76	PASS	AB=1.000;AC=15;AF=0.313;AN=48;BaseQRankSum=0.008;DP=477;FS=6.078;HRun=0;HaplotypeScore=151.2402;InbreedingCoeff=0.5054;MQ=49.48;MQ0=23;MQRankSum=-0.073;QD=16.57;ReadPosRankSum=-2.684;VQSLOD=1.8729;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:10,0:10:2.84:14,3,0	0/0:7,0:7:8.90:0,9,77	0/0:48,0:19:17.65:0,18,464	0/0:101,0:29:26.31:0,26,533	0/0:15,0:15:3.01:0,3,49	1/1:13,0:12:5.36:23,5,0	./.	1/1:5,17:22:48.12:766,48,0	0/0:21,0:21:48.11:0,48,2060	0/0:14,0:14:16.10:0,16,182	0/0:13,0:12:11.99:0,12,100	0/1:8,0:6:1.01:1,0,11	0/0:9,0:9:3.60:0,4,61	0/0:5,0:5:3.01:0,3,34	./.	./.	0/1:4,0:4:0:0,0,0	0/0:12,0:11:3.01:0,3,34	1/1:5,12:17:33.04:727,33,0	1/1:5,20:25:30.10:765,30,0	1/1:6,21:27:6.40:131,6,0	0/0:15,0:15:5.99:0,6,84	0/0:11,0:10:2.90:0,3,44	0/0:16,0:14:1.16:0,1,50	0/0:9,0:9:0:0,0,0	0/1:13,0:11:25.92:26,0,58	./.	0/0:11,0:10:14.40:0,14,120
chr10	17636533	.	GAGAGAC	G	1061.47	PASS	AB=1.000;AC=31;AF=0.596;AN=52;BaseQRankSum=5.533;DP=478;FS=15.200;HRun=0;HaplotypeScore=137.1221;InbreedingCoeff=-0.0331;MQ=49.06;MQ0=22;MQRankSum=-0.341;QD=4.11;ReadPosRankSum=-0.854;VQSLOD=1.8011;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:9,1:10:2.74:12,3,0	0/1:7,0:7:34.79:37,0,35	0/0:50,0:18:11.39:0,11,503	0/0:105,0:28:20.41:0,20,545	1/1:14,0:14:2.99:24,3,0	1/1:11,3:13:4.26:55,4,0	0/1:6,0:5:0:0,0,0	0/1:22,0:22:99:107,0,122	0/0:21,0:21:51.13:0,51,1535	0/1:14,0:13:41.69:109,0,42	0/0:13,0:12:0.91:0,1,2	1/1:9,0:7:1.98:33,2,0	1/1:7,3:10:1.78:35,2,0	1/1:5,0:5:3.01:36,3,0	./.	./.	1/1:4,0:4:2.96:19,3,0	1/1:10,0:9:10.11:53,10,0	0/1:17,0:17:99:207,0,133	0/1:25,0:25:14.73:218,0,15	0/1:27,0:27:14.18:14,0,39	0/1:15,0:15:6.89:58,0,7	1/1:11,0:10:6:54,6,0	0/0:14,2:14:1.52:0,2,13	0/1:9,0:9:0:0,0,0	0/1:13,0:11:15.73:57,0,16	1/1:5,0:5:2.97:20,3,0	0/1:11,0:10:14.02:57,0,14
chr10	17636543	.	G	GAC	202.82	PASS	AB=0.989;AC=14;AF=0.259;AN=54;BaseQRankSum=2.410;DP=432;FS=23.913;HRun=0;HaplotypeScore=123.5161;InbreedingCoeff=0.1391;MQ=40.49;MQ0=29;MQRankSum=-0.300;QD=1.61;ReadPosRankSum=-0.239;VQSLOD=0.1746;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:2.86:0,3,22	0/0:5,0:5:5.98:0,6,58	0/0:44,0:9:17.68:0,18,211	0/0:94,0:25:29.63:0,30,420	0/0:11,1:12:2.99:0,3,24	0/0:13,0:12:2.12:0,2,5	1/1:7,0:6:2.09:7,2,0	0/1:18,0:17:66.67:67,0,112	0/0:20,0:20:50.33:0,50,712	0/1:13,1:13:38.95:39,0,81	0/0:10,1:9:3.94:0,4,27	1/1:10,0:7:5.93:47,6,0	0/1:9,0:9:4.27:13,0,4	0/0:3,1:4:2.22:0,2,7	./.	0/0:4,0:4:0:0,0,0	1/1:6,0:6:3.40:20,3,0	0/0:6,1:6:5.91:0,6,39	0/0:17,0:14:12.42:0,12,122	0/1:23,0:22:40.16:102,0,40	0/1:23,0:22:11.27:11,0,12	0/0:15,0:15:2.93:0,3,34	0/0:8,0:7:2.84:0,3,15	0/0:14,1:13:3.16:0,3,10	0/0:9,0:9:0:0,0,0	0/1:14,0:11:12.76:13,0,39	1/1:2,0:2:2.96:19,3,0	0/0:8,0:6:16.94:0,17,114
chr10	17636554	.	ACAGG	A	618.22	PASS	AB=0.919;AC=20;AF=0.417;AN=48;BaseQRankSum=5.159;DP=438;FS=6.704;HRun=0;HaplotypeScore=123.0479;InbreedingCoeff=0.4340;MQ=37.50;MQ0=52;MQRankSum=-2.239;QD=5.67;ReadPosRankSum=-3.652;VQSLOD=0.9036;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:1.62:0,2,33	0/0:2,0:2:2.87:0,3,28	0/0:56,0:8:21.54:0,22,477	0/0:75,0:23:19.63:0,20,447	./.	1/1:12,3:13:8.34:96,8,0	0/1:3,1:3:0:0,0,0	0/0:25,0:24:52.79:0,53,1264	0/0:20,0:20:54.12:0,54,1401	1/1:11,2:12:1.02:140,1,0	./.	1/1:12,0:8:0.53:11,1,0	0/1:12,0:11:40.54:46,0,41	0/0:5,0:5:0:0,0,1	0/0:9,0:7:1.33:0,1,3	1/1:8,0:8:3.97:79,4,0	1/1:3,1:4:3.01:55,3,0	0/1:6,1:6:12.54:13,0,24	0/0:29,0:15:37.39:0,37,509	0/0:24,0:23:19.74:0,20,207	0/0:27,0:25:5.81:0,6,74	0/1:11,0:11:0.01:0,0,0	./.	0/0:13,0:12:0.70:0,1,9	./.	1/1:10,3:10:14.22:160,14,0	1/1:2,1:3:6.02:88,6,0	1/1:7,0:3:8.89:74,9,0
chr10	17636555	.	CAGGG	C	483.86	PASS	AB=0.973;AC=17;AF=0.340;AN=50;BaseQRankSum=5.559;DP=433;FS=7.468;HRun=0;HaplotypeScore=120.8628;InbreedingCoeff=0.2756;MQ=37.47;MQ0=53;MQRankSum=-2.775;QD=4.56;ReadPosRankSum=-3.445;VQSLOD=0.8710;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:0.89:0,1,47	0/0:2,0:2:2.88:0,3,46	0/0:58,0:9:26.94:0,27,487	0/0:75,0:22:18.52:0,19,397	./.	1/1:14,1:13:8.34:96,8,0	0/1:4,0:3:0:0,0,0	0/0:25,0:24:57.67:0,58,1398	0/0:20,0:20:54.18:0,54,1339	0/1:11,0:10:10.21:59,0,10	./.	0/1:12,0:8:14.05:24,0,14	0/1:11,1:11:31.29:31,0,46	0/0:3,1:4:0:0,0,1	0/0:8,1:7:1.33:0,1,3	0/1:7,1:8:4.14:127,0,4	1/1:4,0:4:3.01:37,3,0	0/1:7,0:6:24.35:24,0,40	0/0:28,0:14:38.88:0,39,636	0/0:24,0:23:23.44:0,23,275	0/0:26,0:24:5.88:0,6,103	0/1:10,0:10:0.01:0,0,0	0/0:9,0:6:0:0,0,0	0/0:13,0:12:0.48:0,0,6	./.	1/1:10,3:10:14.79:120,15,0	1/1:3,0:3:6.02:88,6,0	1/1:7,0:3:1.87:15,2,0
chr10	17636563	.	C	CAG	378.54	PASS	AB=0.824;AC=18;AF=0.391;AN=46;BaseQRankSum=5.452;DP=469;FS=17.618;HRun=0;HaplotypeScore=123.9845;InbreedingCoeff=0.4174;MQ=41.20;MQ0=56;MQRankSum=-2.430;QD=3.38;ReadPosRankSum=-1.909;VQSLOD=0.6634;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:13,3:15:8.86:99,9,0	0/0:3,0:3:2.14:0,2,8	0/0:69,0:12:22.28:0,22,223	0/0:81,0:20:12.85:0,13,174	./.	1/1:12,4:14:10.76:63,11,0	1/1:3,1:3:0.89:2,1,0	0/0:27,0:26:72.18:0,72,883	0/0:20,0:20:48.15:0,48,610	0/0:13,0:12:10.52:0,11,84	./.	1/1:11,2:9:3.23:49,3,0	0/1:10,5:13:17.86:78,0,18	0/0:8,0:7:1.81:0,2,5	1/1:8,2:8:3.37:17,3,0	1/1:7,2:9:9.48:86,9,0	1/1:5,0:5:2.97:25,3,0	0/1:3,4:6:25.86:89,0,26	0/0:30,0:15:36.06:0,36,436	0/0:20,0:19:24.08:0,24,305	0/0:23,0:20:5.77:0,6,76	0/1:9,1:9:0:0,0,0	./.	0/0:10,4:12:3.62:0,4,14	./.	0/0:13,0:9:5.64:0,6,27	0/1:6,0:6:15.24:15,0,15	./.
chr10	17636565	.	G	GAC	218.31	PASS	AB=0.976;AC=19;AF=0.380;AN=50;BaseQRankSum=6.201;DP=484;FS=14.250;HRun=0;HaplotypeScore=126.7436;InbreedingCoeff=0.3989;MQ=40.51;MQ0=56;MQRankSum=-2.184;QD=1.51;ReadPosRankSum=-1.580;VQSLOD=1.5465;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:14,2:15:4:46,4,0	0/0:3,0:3:2.77:0,3,26	0/0:71,0:11:22.84:0,23,306	0/0:84,0:18:11:0,11,227	./.	1/1:15,1:14:4.96:32,5,0	0/0:4,0:3:0:0,0,0	0/0:30,0:29:75.68:0,76,1112	0/0:20,0:20:48.16:0,48,732	0/0:14,0:12:19.57:0,20,99	./.	1/1:14,1:9:5.56:41,6,0	0/1:13,2:13:20.68:61,0,21	0/0:6,3:7:1.81:0,2,5	1/1:11,1:9:3.08:8,3,0	1/1:9,3:10:12.39:104,12,0	1/1:5,0:5:2.20:7,2,0	0/1:7,0:6:33.87:50,0,34	0/0:30,0:15:45.05:0,45,596	0/0:19,0:18:27.02:0,27,372	0/1:22,0:19:5.03:5,0,82	0/1:10,0:7:0:0,0,0	0/1:9,0:6:0:0,0,0	0/0:13,1:12:3.91:0,4,23	./.	0/0:13,0:9:3.72:0,4,21	1/1:6,0:6:1.26:4,1,0	0/0:7,0:4:5.92:0,6,39
chr10	17636577	.	GAC	G	209.56	PASS	AB=0.927;AC=24;AF=0.480;AN=50;BaseQRankSum=7.508;DP=522;FS=0.000;HRun=0;HaplotypeScore=136.1795;InbreedingCoeff=0.4697;MQ=35.81;MQ0=60;MQRankSum=-2.618;QD=1.20;ReadPosRankSum=2.211;VQSLOD=1.9745;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:16,0:15:0.72:1,0,3	1/1:2,0:3:2.27:10,2,0	0/0:73,2:12:29.06:0,29,424	0/0:85,1:14:18.21:0,18,262	./.	1/1:14,3:14:8.31:59,8,0	0/1:5,1:5:0.04:0,0,0	0/0:40,0:35:99:0,99,1567	0/0:23,0:23:48.11:0,48,813	0/0:14,1:14:2.05:0,2,111	./.	0/1:16,2:13:3.81:22,0,4	1/1:19,1:18:9.53:79,10,0	0/0:9,1:8:1.82:0,2,5	1/1:9,2:8:3.09:8,3,0	1/1:12,2:12:5.16:61,5,0	1/1:4,0:5:5.60:28,6,0	1/1:5,0:4:4.31:14,4,0	0/0:28,0:15:35.85:0,36,571	0/0:17,0:16:21.04:0,21,372	0/0:19,2:19:5.68:0,6,105	0/1:13,0:8:0:0,0,0	0/1:8,0:5:0:0,0,0	1/1:11,1:10:2.92:18,3,0	./.	0/1:15,0:12:19.46:19,0,43	1/1:4,0:6:6.73:36,7,0	0/0:8,0:6:1.56:0,2,14
chr10	17636581	.	CAG	C	116.05	PASS	AB=0.981;AC=16;AF=0.308;AN=52;BaseQRankSum=5.311;DP=532;FS=1.022;HRun=0;HaplotypeScore=151.1966;InbreedingCoeff=0.2445;MQ=36.03;MQ0=45;MQRankSum=-2.242;QD=0.69;ReadPosRankSum=1.595;VQSLOD=2.8413;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:15:7.68:0,8,35	1/1:5,0:5:1.51:17,2,0	0/0:68,0:11:27.97:0,28,441	0/0:80,0:14:23.31:0,23,255	./.	1/1:15,1:13:8.29:70,8,0	0/1:7,0:6:0.03:0,0,0	0/0:43,0:38:99:0,99,1593	0/0:24,0:24:45.04:0,45,700	0/0:17,0:15:15.81:0,16,284	./.	0/1:22,0:16:9.05:9,0,17	0/1:21,1:19:17.35:68,0,17	0/0:10,1:9:3.85:0,4,11	0/0:15,1:11:0.21:0,0,1	0/1:13,1:12:18.99:48,0,19	1/1:5,0:5:1.99:11,2,0	0/0:6,0:5:7.50:0,7,35	0/0:24,0:15:36.03:0,36,560	0/0:15,0:14:21.04:0,21,313	0/0:20,0:19:5.68:0,6,76	0/1:11,1:7:0:0,0,0	0/1:12,0:9:0:0,0,0	0/1:13,0:11:0.03:0,0,0	0/1:10,0:8:0:0,0,0	0/1:21,0:15:7.98:8,0,168	0/1:8,0:8:8.78:9,0,21	0/0:7,0:6:4.68:0,5,39
chr10	17636583	.	G	GAC	637.45	PASS	AB=0.775;AC=18;AF=0.346;AN=52;BaseQRankSum=4.783;DP=525;FS=0.805;HRun=0;HaplotypeScore=154.0866;InbreedingCoeff=0.2015;MQ=36.18;MQ0=40;MQRankSum=-2.916;QD=3.41;ReadPosRankSum=3.095;VQSLOD=2.6232;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:12,6:15:6.93:0,7,33	1/1:6,0:6:1.55:4,2,0	0/0:59,0:11:29.57:0,30,376	0/0:77,0:14:14.53:0,15,238	./.	1/1:13,4:14:2.68:80,3,0	0/0:5,2:6:0:0,0,0	0/0:41,0:36:99:0,99,1412	0/0:23,0:23:42.05:0,42,626	0/1:17,2:17:26.54:27,0,312	./.	0/1:14,8:16:4.86:38,0,5	0/1:12,10:19:19.59:172,0,20	1/1:3,8:9:3.48:45,3,0	1/1:11,5:11:4.23:57,4,0	0/1:9,5:12:19.36:172,0,19	1/1:5,0:5:1.47:6,1,0	0/0:6,0:5:8.50:0,8,30	0/0:23,0:16:36.09:0,36,514	0/0:15,0:14:21.54:0,22,287	0/0:19,0:18:5.72:0,6,76	0/1:7,6:8:0.01:0,0,0	0/1:10,3:10:0.04:0,0,0	0/0:11,2:11:0.84:0,1,3	0/0:5,4:7:0:0,0,0	0/1:19,2:15:66.72:67,0,150	0/1:5,3:8:22.09:104,0,22	0/0:8,0:6:8.99:0,9,97
chr10	17636585	.	GAA	G	284.71	PASS	AB=0.927;AC=24;AF=0.462;AN=52;BaseQRankSum=5.966;DP=505;FS=0.780;HRun=3;HaplotypeScore=144.7950;InbreedingCoeff=0.3395;MQ=36.64;MQ0=36;MQRankSum=-2.893;QD=1.27;ReadPosRankSum=4.428;VQSLOD=0.0049;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:14:0.18:3,0,0	1/1:6,0:6:1.51:17,2,0	0/0:55,1:11:28.93:0,29,379	0/0:72,0:14:21.23:0,21,205	./.	1/1:15,2:14:5.59:70,6,0	0/1:6,1:6:0.04:0,0,0	0/0:39,0:34:99:0,99,1678	0/0:21,1:22:42.54:0,43,608	0/1:19,1:17:9.70:10,0,225	./.	0/1:20,2:16:2.17:17,0,2	1/1:21,1:19:14.48:127,14,0	0/1:10,1:9:1.48:2,0,1	1/1:15,1:11:3.59:16,4,0	1/1:12,2:12:9.79:80,10,0	1/1:5,0:5:4.91:27,5,0	0/1:6,0:5:11.50:13,0,11	0/0:19,0:14:38.87:0,39,584	0/0:15,0:14:24.75:0,25,264	0/0:19,0:18:18.81:0,19,85	0/1:12,0:7:0:0,0,0	0/1:10,2:9:0.11:0,0,0	0/0:11,1:10:2.49:0,2,6	0/1:6,3:7:0:0,0,0	0/1:21,0:15:23.68:24,0,74	0/1:8,0:8:17.25:25,0,17	0/0:8,0:6:3.47:0,3,21
chr10	17636595	.	G	GAC	152.76	PASS	AB=0.954;AC=12;AF=0.222;AN=54;BaseQRankSum=2.954;DP=614;FS=9.514;HRun=0;HaplotypeScore=198.5080;InbreedingCoeff=-0.0458;MQ=29.95;MQ0=31;MQRankSum=-0.309;QD=0.69;ReadPosRankSum=0.784;VQSLOD=1.9331;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,1:20:5.41:0,5,28	0/0:8,0:8:0.83:0,1,3	0/0:43,0:8:20.26:0,20,129	0/0:59,0:9:2.53:0,3,52	./.	1/1:17,2:16:7.11:57,7,0	0/0:17,0:16:6.95:0,7,32	0/0:45,0:40:96.40:0,96,691	0/1:19,0:19:23.94:24,0,141	0/1:30,2:27:13.15:13,0,373	0/0:16,0:13:0:0,0,0	0/0:22,2:17:13.16:0,13,79	0/1:21,2:20:36.08:36,0,73	0/0:14,0:11:0.20:0,0,23	0/0:16,3:14:3.96:0,4,17	0/1:13,2:13:17.90:18,0,62	0/1:7,0:7:9.63:10,0,25	0/1:11,0:9:7.45:7,0,85	0/0:21,0:21:12.58:0,13,227	0/0:20,0:18:6.38:0,6,51	0/0:26,0:25:3.79:0,4,18	0/1:25,1:20:0:0,0,1	0/1:16,1:15:0.04:0,0,1	0/0:13,0:10:0.84:0,1,3	0/0:12,2:12:2.37:0,2,8	0/1:36,0:27:24.37:24,0,380	0/1:14,1:16:64.95:89,0,65	0/0:8,0:5:11.92:0,12,124
chr10	17636613	.	G	GGGAGAC	1301.67	PASS	AB=0.984;AC=26;AF=0.481;AN=54;BaseQRankSum=3.316;DP=625;FS=0.676;HRun=0;HaplotypeScore=224.9339;InbreedingCoeff=-0.0928;MQ=26.12;MQ0=24;MQRankSum=-0.076;QD=2.94;ReadPosRankSum=-0.225;VQSLOD=2.4101;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:23:10.22:59,0,10	1/1:8,0:8:6.03:14,6,0	0/0:14,0:1:3.01:0,3,50	./.	0/1:30,0:27:0:0,0,0	1/1:23,0:18:12.21:78,12,0	0/0:32,0:27:1.72:0,2,5	0/0:37,0:35:64.66:0,65,569	0/0:17,0:17:23.93:0,24,311	0/1:43,1:35:99:414,0,286	1/1:25,0:21:0.47:1,0,0	0/1:21,0:16:12.86:69,0,13	0/1:23,0:20:99:106,0,122	0/1:17,0:13:9.44:9,0,18	0/1:19,0:14:5.24:5,0,38	0/1:17,0:14:47.57:48,0,138	0/0:7,0:7:6.29:0,6,32	0/1:10,0:9:53.79:97,0,54	0/0:21,0:21:41.46:0,41,399	0/1:23,0:21:0.46:0,0,42	0/0:26,0:22:7.85:0,8,71	0/1:33,0:27:0.70:1,0,1	1/1:20,0:19:0.70:31,1,0	1/1:14,0:12:0.42:1,0,0	1/1:16,0:14:1.57:5,2,0	0/1:45,0:37:99:229,0,268	0/1:12,3:16:38.91:63,0,39	0/1:11,0:7:36.32:209,0,36
chr10	17636645	.	CAG	C	3716.93	PASS	AB=0.736;AC=32;AF=0.571;AN=56;BaseQRankSum=4.033;DP=569;FS=2.792;HRun=0;HaplotypeScore=207.4589;InbreedingCoeff=0.2404;MQ=29.86;MQ0=9;MQRankSum=-1.258;QD=8.47;ReadPosRankSum=1.079;VQSLOD=3.4298;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:18,8:24:9.03:112,9,0	1/1:7,3:10:7.40:92,7,0	0/0:14,0:4:9:0,9,106	0/0:9,0:4:3.47:0,3,29	0/0:19,13:29:0.36:0,0,1	1/1:12,5:15:3.47:190,3,0	1/1:23,11:30:18.18:226,18,0	0/0:13,0:12:19.29:0,19,222	0/0:19,0:19:32.82:0,33,499	0/1:32,14:39:99:440,0,295	0/1:16,12:24:0.03:0,0,0	0/1:13,9:19:5.19:289,0,5	0/1:14,6:18:30.03:209,0,30	1/1:10,9:15:23.94:286,24,0	1/1:9,6:12:15.05:194,15,0	1/1:10,9:16:6.21:218,6,0	1/1:5,5:10:1.50:36,2,0	0/1:5,4:8:17.67:119,0,18	0/0:15,0:13:8.72:0,9,86	0/0:15,0:13:3.78:0,4,88	0/0:12,0:10:0.47:0,0,1	1/1:18,16:29:45.42:581,45,0	1/1:17,9:25:17.82:216,18,0	1/1:7,7:12:0.57:2,1,0	1/1:10,5:14:8.65:108,9,0	0/1:40,6:40:99:171,0,441	0/1:9,7:16:50.42:136,0,50	0/1:6,6:11:93.45:93,0,117
chr10	17636669	.	GAC	G	5258.95	PASS	AB=0.669;AC=38;AF=0.679;AN=56;BaseQRankSum=8.878;DP=615;FS=20.772;HRun=0;HaplotypeScore=197.7372;InbreedingCoeff=0.6119;MQ=52.82;MQ0=3;MQRankSum=-6.979;QD=12.06;ReadPosRankSum=3.352;VQSLOD=3.2679;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,19:23:9.03:116,9,0	1/1:7,4:11:17.45:192,17,0	0/0:34,0:18:35.36:0,35,441	0/0:34,0:20:42.92:0,43,422	1/1:16,12:27:8.16:71,8,0	1/1:8,10:15:1.82:210,2,0	1/1:18,8:23:27.45:328,27,0	0/0:34,0:32:77.83:0,78,774	0/0:15,0:15:20.90:0,21,532	0/1:22,22:38:70.31:597,0,70	0/1:12,14:22:0.03:1,0,0	1/1:6,15:20:13.61:378,14,0	1/1:4,11:14:7.78:331,8,0	1/1:5,8:12:15.71:338,16,0	1/1:5,10:13:15.05:215,15,0	1/1:1,15:15:21.07:305,21,0	1/1:2,9:11:9.24:76,9,0	0/1:3,13:15:22.27:112,0,22	0/0:22,0:22:62.40:0,62,584	0/0:21,0:20:38.76:0,39,417	0/0:19,0:18:24.38:0,24,187	1/1:10,17:25:51.33:687,51,0	1/1:5,16:19:17.77:257,18,0	1/1:14,8:21:3.25:25,3,0	1/1:4,10:13:9.03:128,9,0	0/1:26,8:31:94.04:414,0,94	1/1:7,7:14:9.67:191,10,0	1/1:12,6:17:18.82:287,19,0
chr10	17637384	.	GCC	G	4843.38	PASS	AB=0.635;AC=42;AF=0.750;AN=56;BaseQRankSum=-5.340;DP=480;FS=6.567;HRun=12;HaplotypeScore=74.8591;InbreedingCoeff=0.1323;MQ=78.56;MQ0=2;MQRankSum=-0.741;QD=11.24;ReadPosRankSum=3.133;VQSLOD=3.1367;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:14,4:32:51.55:52,0,81	1/1:3,7:9:9.01:92,9,0	0/0:11,0:11:9.30:0,9,185	0/0:20,0:19:29.26:0,29,302	1/1:4,9:15:32.71:301,33,0	0/1:5,11:17:9.67:281,0,10	1/1:7,39:49:99:1011,104,0	1/1:7,0:18:16.48:70,16,0	0/1:6,1:20:36.71:38,0,37	1/1:8,2:11:14.75:134,15,0	1/1:3,3:7:8.38:72,8,0	0/0:5,1:17:0.47:0,0,83	0/1:5,1:6:19.52:20,0,32	0/1:6,0:9:15.53:16,0,25	1/1:6,14:21:29.76:286,30,0	1/1:3,10:15:32.52:298,33,0	1/1:5,32:38:77.88:773,78,0	1/1:3,19:24:44.55:420,45,0	1/1:6,0:12:4.17:33,4,0	1/1:0,0:14:11.03:37,11,0	1/1:13,0:42:53.77:177,54,0	0/1:1,1:7:17.65:18,0,22	0/1:2,2:11:37.08:37,0,48	0/1:4,1:16:10.04:10,0,41	1/1:2,5:7:9:92,9,0	1/1:1,11:12:30.06:302,30,0	1/1:3,9:12:21:213,21,0	1/1:1,4:4:5.99:61,6,0
chr10	17637395	.	CCA	C	562.86	PASS	AB=0.985;AC=17;AF=0.304;AN=56;BaseQRankSum=2.403;DP=499;FS=2.168;HRun=0;HaplotypeScore=93.1301;InbreedingCoeff=0.0204;MQ=77.64;MQ0=3;MQRankSum=-0.788;QD=2.20;ReadPosRankSum=8.324;VQSLOD=0.1752;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:24.33:0,24,319	1/1:8,0:7:6.63:20,7,0	0/0:15,0:13:2.08:0,2,216	0/0:20,0:18:20.92:0,21,269	0/1:13,2:15:29.25:84,0,29	0/1:17,0:17:40.87:41,0,123	0/1:49,1:50:68.74:165,0,69	0/0:18,0:18:51.16:0,51,317	0/1:22,0:21:1.22:1,0,219	0/0:12,0:12:10.41:0,10,150	0/1:8,0:8:9.34:9,0,15	0/0:18,0:18:29.14:0,29,262	0/0:11,0:11:16.55:0,17,153	0/0:9,0:9:9.36:0,9,61	1/1:15,0:15:11.48:48,11,0	0/1:17,0:17:23.65:24,0,96	0/1:38,1:39:38.22:171,0,38	0/1:25,0:25:56.93:65,0,57	0/0:13,0:13:37.44:0,37,244	0/0:19,0:19:46.50:0,46,305	0/0:40,0:40:98.19:0,98,546	0/0:8,0:8:10.68:0,11,103	0/0:10,0:10:8.72:0,9,81	0/0:19,0:19:30.11:0,30,225	0/1:10,0:10:2.59:3,0,102	0/1:14,0:14:40.72:42,0,41	0/1:11,0:11:20.46:35,0,20	1/1:5,0:4:4.72:15,5,0
chr10	17638518	.	GT	G	7585.41	PASS	AB=1.000;AC=38;AF=0.679;AN=56;BaseQRankSum=4.447;DP=609;FS=0.000;HRun=5;HaplotypeScore=160.3935;InbreedingCoeff=0.6670;MQ=50.25;MQ0=9;MQRankSum=-3.372;QD=17.20;ReadPosRankSum=5.456;VQSLOD=3.1140;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,21:30:62.60:699,63,0	1/1:15,0:16:14.03:44,14,0	0/0:24,1:14:8.78:0,9,319	0/0:30,0:18:30.51:0,31,369	0/1:23,0:23:8.73:30,0,9	1/1:3,15:17:33.07:343,33,0	1/1:10,15:25:64.40:684,64,0	0/0:23,0:22:20.74:0,21,142	0/0:22,0:23:30.09:0,30,386	0/1:22,0:22:8.81:25,0,9	0/1:21,0:21:22.17:23,0,22	1/1:3,20:23:60.13:624,60,0	1/1:3,6:9:23.89:224,24,0	1/1:5,21:26:75.09:766,75,0	1/1:8,26:34:90.22:959,90,0	1/1:3,16:19:39.10:420,39,0	1/1:32,1:32:39.08:155,39,0	1/1:7,8:14:33.09:357,33,0	0/0:31,0:27:38.95:0,39,281	0/0:21,0:20:26.29:0,26,156	0/0:15,0:14:10.88:0,11,70	1/1:4,15:19:51.02:512,51,0	1/1:6,15:21:51.09:519,51,0	1/1:6,13:18:48.11:509,48,0	1/1:2,15:17:49.94:517,50,0	1/1:27,1:28:10.11:100,10,0	1/1:13,0:13:14.86:60,15,0	0/1:10,0:10:12.34:14,0,12
chr10	17638519	.	TTTTTG	T	11962.73	PASS	AB=1.000;AC=45;AF=0.804;AN=56;BaseQRankSum=-2.123;DP=622;FS=3.974;HRun=0;HaplotypeScore=188.2897;InbreedingCoeff=0.6059;MQ=51.08;MQ0=9;MQRankSum=0.548;QD=23.36;ReadPosRankSum=0.940;VQSLOD=4.4029;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:30:72.10:926,72,0	1/1:16,0:16:39.90:323,40,0	0/0:27,0:15:27.33:0,27,484	0/0:30,0:18:17.47:0,17,507	1/1:23,0:23:46.66:396,47,0	1/1:18,0:17:32.60:303,33,0	1/1:25,0:25:56.53:485,57,0	0/1:23,0:22:64.34:64,0,131	0/0:24,0:24:28.31:0,28,505	1/1:22,0:22:24.68:327,25,0	1/1:21,0:21:35.46:240,35,0	1/1:24,0:24:62.62:1078,63,0	1/1:10,0:10:26.04:323,26,0	1/1:27,0:27:76.18:1221,76,0	1/1:36,0:36:93.52:835,94,0	1/1:19,0:19:33.92:373,34,0	1/1:31,2:32:80.19:767,80,0	1/1:16,0:15:34.40:262,34,0	0/0:29,0:25:1.22:0,1,277	0/1:21,0:20:99:117,0,267	0/1:15,0:14:11.32:11,0,34	1/1:19,0:19:50.76:849,51,0	1/1:22,0:22:52.49:703,52,0	1/1:21,0:20:52.39:654,52,0	1/1:20,0:20:38.45:493,38,0	1/1:26,2:28:69.97:701,70,0	1/1:12,1:13:33.07:298,33,0	1/1:10,0:10:23.97:213,24,0
chr10	17638520	.	TTTTG	T	13703.78	PASS	AB=1.000;AC=46;AF=0.821;AN=56;BaseQRankSum=-2.690;DP=623;FS=6.520;HRun=0;HaplotypeScore=172.6217;InbreedingCoeff=0.5274;MQ=52.11;MQ0=9;MQRankSum=-0.060;QD=25.33;ReadPosRankSum=2.203;VQSLOD=4.3062;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:31,0:31:61.98:593,62,0	1/1:11,5:16:42.02:584,42,0	0/0:27,0:15:23.28:0,23,403	0/0:31,0:19:16.48:0,16,466	1/1:19,5:24:65.83:732,66,0	1/1:18,0:17:32.64:473,33,0	1/1:26,0:26:66.05:802,66,0	0/1:22,0:21:76.99:82,0,77	0/0:24,0:24:29.91:0,30,426	1/1:17,4:21:30.27:539,30,0	1/1:8,13:21:41.86:467,42,0	1/1:25,0:25:48.24:686,48,0	1/1:10,0:10:17.40:208,17,0	1/1:26,0:26:67.52:799,68,0	1/1:36,0:36:94.37:1331,94,0	1/1:19,0:19:38.72:595,39,0	1/1:20,13:32:87.02:1213,87,0	1/1:16,0:15:37.74:410,38,0	0/1:28,0:24:9.49:9,0,219	0/1:22,0:21:99:138,0,188	0/1:14,0:13:12.45:29,0,12	1/1:20,0:20:45.68:535,46,0	1/1:22,0:22:43.97:454,44,0	1/1:21,0:20:42.23:424,42,0	1/1:20,0:20:38.77:811,39,0	1/1:24,3:27:74.81:915,75,0	1/1:8,5:13:38.88:504,39,0	1/1:6,4:10:24.02:371,24,0
chr10	17638521	.	TTTG	T	10977	PASS	AB=1.000;AC=46;AF=0.821;AN=56;BaseQRankSum=-1.669;DP=613;FS=4.729;HRun=0;HaplotypeScore=170.2149;InbreedingCoeff=0.5097;MQ=50.97;MQ0=9;MQRankSum=0.376;QD=20.59;ReadPosRankSum=1.591;VQSLOD=4.7972;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:31,0:31:54.73:489,55,0	1/1:16,0:16:43.80:432,44,0	0/0:26,0:14:26.68:0,27,356	0/0:30,0:18:16.87:0,17,408	1/1:26,0:26:71.79:669,72,0	1/1:17,0:16:32.62:312,33,0	1/1:26,0:26:65.32:524,65,0	0/1:21,0:20:20.12:114,0,20	0/0:24,0:24:25:0,25,322	1/1:18,1:19:45.59:498,46,0	1/1:16,4:20:41.91:479,42,0	1/1:25,0:25:44.87:572,45,0	1/1:9,0:9:15.49:177,15,0	1/1:26,0:26:65.65:674,66,0	1/1:35,0:35:93.81:886,94,0	1/1:17,0:17:38.67:380,39,0	1/1:31,2:32:92.97:1018,93,0	1/1:16,0:15:39.88:285,40,0	0/1:27,0:23:73.59:74,0,140	0/1:22,0:21:97.98:208,0,98	0/1:13,0:12:14.91:37,0,15	1/1:20,0:20:41.37:441,41,0	1/1:21,0:21:42.19:385,42,0	1/1:21,0:20:35.94:359,36,0	1/1:22,0:22:44.81:520,45,0	1/1:28,0:28:80.10:790,80,0	1/1:13,0:13:38.68:387,39,0	1/1:9,0:9:24.01:266,24,0
chr10	17638522	.	T	TG	1227.39	PASS	AB=0.982;AC=24;AF=0.429;AN=56;BaseQRankSum=11.368;DP=608;FS=1.978;HRun=0;HaplotypeScore=187.7369;InbreedingCoeff=0.6415;MQ=51.68;MQ0=9;MQRankSum=-6.366;QD=4.12;ReadPosRankSum=5.226;VQSLOD=3.5006;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:31,0:31:21.01:213,21,0	0/0:15,0:15:12.92:0,13,179	0/0:27,0:15:19.65:0,20,353	0/0:29,0:17:39.59:0,40,432	0/0:25,1:26:9.77:0,10,287	1/1:17,0:16:23.65:90,24,0	1/1:25,0:25:42.07:171,42,0	0/0:21,0:20:41.52:0,42,331	0/0:24,0:24:30.09:0,30,366	0/0:18,0:19:24.39:0,24,261	0/0:18,0:18:14.10:0,14,146	0/1:25,0:25:14:60,0,14	0/1:9,0:9:11.42:26,0,11	1/1:26,0:26:9.94:82,10,0	1/1:35,0:35:55.65:205,56,0	1/1:16,0:16:23.36:76,23,0	0/0:30,3:32:4.81:0,5,273	1/1:17,0:16:25.75:123,26,0	0/0:26,0:22:64.40:0,64,495	0/0:22,0:21:53.28:0,53,373	0/0:12,0:11:22.63:0,23,161	1/1:21,0:21:1.70:48,2,0	1/1:20,0:20:14.88:156,15,0	0/1:21,0:20:3.65:71,0,4	1/1:22,0:22:3.30:73,3,0	0/0:29,0:29:21.73:0,22,345	0/1:12,1:13:35.05:35,0,127	0/0:9,0:9:24.54:0,25,131
chr10	17638523	.	TG	T	8473.78	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=0.756;DP=599;FS=8.960;HRun=1;HaplotypeScore=159.2897;InbreedingCoeff=0.9636;MQ=51.57;MQ0=9;MQRankSum=-2.720;QD=16.26;ReadPosRankSum=3.688;VQSLOD=4.5865;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:30:50.85:341,51,0	1/1:14,1:15:44.81:371,45,0	0/0:26,1:15:23.43:0,23,248	0/0:26,0:15:18.25:0,18,266	1/1:25,0:25:71.77:591,72,0	1/1:16,0:15:32.32:209,32,0	1/1:25,0:25:46.61:331,47,0	1/1:20,0:19:33.10:218,33,0	0/0:24,0:24:25.87:0,26,137	1/1:17,1:18:47.97:422,48,0	1/1:17,0:17:41.80:333,42,0	1/1:25,0:25:37.87:379,38,0	1/1:9,0:9:8.20:121,8,0	1/1:26,0:26:57.50:437,57,0	1/1:35,0:35:78.05:552,78,0	1/1:16,0:16:38.03:243,38,0	1/1:32,1:32:92.75:771,93,0	1/1:18,0:17:22.47:169,22,0	1/1:24,0:20:44.65:249,45,0	1/1:21,1:21:48.45:300,48,0	1/1:11,0:10:18.17:113,18,0	1/1:20,1:21:47.59:326,48,0	1/1:20,0:20:34.67:268,35,0	1/1:22,0:21:35.72:259,36,0	1/1:23,0:23:17.11:274,17,0	1/1:29,0:29:83.22:679,83,0	1/1:12,1:13:38.88:316,39,0	1/1:7,1:8:23.95:202,24,0
chr10	17638524	.	GTTTT	G	8015.07	PASS	AB=1.000;AC=40;AF=0.714;AN=56;BaseQRankSum=3.346;DP=604;FS=5.526;HRun=13;HaplotypeScore=188.6366;InbreedingCoeff=0.7684;MQ=51.63;MQ0=9;MQRankSum=-3.494;QD=17.93;ReadPosRankSum=6.597;VQSLOD=1.3010;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:14,16:30:51.75:569,52,0	1/1:15,0:15:2.72:212,3,0	0/0:24,0:15:25.38:0,25,422	0/0:26,0:15:17.97:0,18,470	1/1:24,0:25:5.93:178,6,0	1/1:6,0:15:26.97:262,27,0	1/1:14,0:26:25.34:370,25,0	0/0:21,0:20:35.02:0,35,359	0/0:4,0:26:27.09:0,27,462	0/1:18,0:18:46.72:151,0,47	0/1:18,0:18:25.29:132,0,25	1/1:5,20:25:64.89:793,65,0	1/1:5,4:9:15.73:186,16,0	1/1:8,19:27:66.74:853,67,0	1/1:14,0:36:66.06:716,66,0	1/1:6,1:16:26.60:312,27,0	1/1:33,0:32:27:478,27,0	1/1:12,0:17:17.54:165,18,0	0/0:23,0:19:53.41:0,53,666	0/0:22,0:21:41.31:0,41,540	0/0:11,0:10:16.66:0,17,115	1/1:6,15:21:54.90:631,55,0	1/1:5,14:19:36.82:416,37,0	1/1:15,7:21:35.57:444,36,0	1/1:10,0:23:37.79:434,38,0	1/1:27,1:29:15.41:331,15,0	1/1:13,0:13:16.99:206,17,0	1/1:8,0:8:17.91:177,18,0
chr10	17638527	.	T	TTG	1220.16	PASS	AB=0.910;AC=17;AF=0.304;AN=56;BaseQRankSum=3.068;DP=601;FS=3.061;HRun=0;HaplotypeScore=193.1473;InbreedingCoeff=0.2707;MQ=54.09;MQ0=9;MQRankSum=-1.732;QD=4.24;ReadPosRankSum=0.792;VQSLOD=3.1237;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:30:37.09:264,37,0	0/0:14,0:14:27.63:0,28,260	0/0:26,0:15:20.70:0,21,345	0/0:29,0:17:32.54:0,33,336	0/0:24,0:24:40.10:0,40,394	0/1:15,0:14:4:4,0,10	0/1:20,6:26:94.83:109,0,95	0/0:20,0:19:39.67:0,40,313	0/0:25,0:25:9.34:0,9,38	0/0:18,0:18:37.42:0,37,324	0/0:20,0:20:38.10:0,38,283	0/1:27,0:27:36.07:36,0,47	0/1:9,0:9:9.08:31,0,9	0/1:27,0:27:40.88:48,0,41	0/1:26,8:36:73.79:119,0,74	0/1:13,3:16:10.61:21,0,11	0/0:31,0:30:68.74:0,69,507	0/1:12,6:17:49.21:159,0,49	0/0:25,0:21:57.57:0,58,427	0/0:21,0:20:52.85:0,53,376	0/0:11,0:10:16.71:0,17,101	0/1:21,0:21:6.42:74,0,6	1/1:18,0:18:10.08:139,10,0	1/1:22,0:21:7.98:137,8,0	1/1:16,7:23:20.98:257,21,0	0/0:28,0:28:58.02:0,58,451	0/0:13,0:13:33.82:0,34,233	0/0:8,0:8:20.83:0,21,150
chr10	17638528	.	T	TG	2156.81	PASS	AB=0.978;AC=16;AF=0.286;AN=56;BaseQRankSum=5.994;DP=601;FS=5.643;HRun=0;HaplotypeScore=181.1049;InbreedingCoeff=0.8255;MQ=55.98;MQ0=7;MQRankSum=-4.460;QD=11.00;ReadPosRankSum=2.754;VQSLOD=4.0539;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:26,3:29:72.63:506,73,0	0/0:14,0:14:41.57:0,42,332	0/0:27,0:16:21.58:0,22,356	0/0:30,0:18:33.68:0,34,374	0/0:24,0:24:66.90:0,67,536	0/0:12,0:12:29.55:0,30,192	0/0:25,0:25:36.89:0,37,407	0/0:20,0:19:40.74:0,41,322	0/0:25,0:25:26.10:0,26,153	0/0:19,0:19:47.97:0,48,429	0/0:20,0:20:40.65:0,41,330	1/1:21,6:27:61.17:330,61,0	1/1:8,2:10:21.45:132,21,0	1/1:25,2:27:73.06:398,73,0	0/0:38,0:38:58.95:0,59,539	0/0:16,0:16:38.44:0,38,259	0/0:30,0:29:77.27:0,77,622	0/1:18,0:17:14.28:14,0,148	0/0:24,0:21:61.50:0,62,465	0/0:21,0:20:53.74:0,54,372	0/0:11,0:10:17.66:0,18,106	1/1:22,0:22:51.33:342,51,0	1/1:16,2:18:40.20:226,40,0	1/1:22,1:22:56.20:392,56,0	0/1:21,1:22:18.10:18,0,238	0/0:28,0:28:62.68:0,63,543	0/0:13,0:13:35.99:0,36,257	0/0:8,0:8:20.99:0,21,187
chr10	17638630	.	A	AC	20660.15	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=-9.539;DP=633;FS=25.365;HRun=1;HaplotypeScore=65.8957;InbreedingCoeff=0.9894;MQ=80.03;MQ0=1;MQRankSum=-4.200;QD=43.22;ReadPosRankSum=6.980;VQSLOD=2.5318;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,35:35:99:1626,102,0	1/1:0,15:15:45.15:719,45,0	0/0:24,0:24:72.24:0,72,993	0/0:20,0:20:51.06:0,51,761	1/1:1,23:24:66.23:1053,66,0	1/1:0,16:16:39.13:622,39,0	1/1:0,34:34:99:1579,99,0	0/0:15,0:15:45.13:0,45,598	0/0:17,0:17:51.17:0,51,712	1/1:0,26:26:75.17:1107,75,0	1/1:0,20:20:48.16:766,48,0	1/1:1,18:19:48.16:765,48,0	1/1:0,23:24:66.22:1041,66,0	1/1:1,24:25:63.21:1002,63,0	1/1:0,37:37:99:1768,111,0	1/1:1,22:23:54.18:861,54,0	1/1:0,40:40:99:1818,114,0	1/1:0,14:14:42.14:670,42,0	0/0:23,0:23:66.22:0,66,919	0/0:24,0:24:69.22:0,69,947	0/0:31,0:31:75.25:0,75,1048	1/1:0,18:18:51.17:814,51,0	1/1:0,20:20:54.08:862,54,0	1/1:0,25:25:66.22:1050,66,0	1/1:0,13:13:30.10:479,30,0	1/1:2,23:25:69.24:1101,69,0	1/1:0,21:21:51.17:813,51,0	1/1:1,3:4:9.03:144,9,0
chr10	17638710	.	TTG	T	257.86	PASS	AB=0.930;AC=10;AF=0.200;AN=50;BaseQRankSum=0.968;DP=521;FS=1.029;HRun=0;HaplotypeScore=112.1301;InbreedingCoeff=0.3122;MQ=52.73;MQ0=15;MQRankSum=0.133;QD=1.83;ReadPosRankSum=0.709;VQSLOD=1.9539;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:35,1:36:8.53:9,0,212	0/0:6,0:6:6.01:0,6,64	./.	./.	0/0:10,0:11:5.96:0,6,49	0/0:10,0:8:3.01:0,3,30	0/0:26,0:25:5.73:0,6,51	./.	1/1:5,0:9:8.52:42,9,0	0/0:16,0:16:27.01:0,27,290	0/0:7,0:7:12:0,12,110	0/1:11,1:12:17.58:18,0,124	0/0:18,0:18:30.09:0,30,355	0/0:20,0:19:18.04:0,18,194	0/0:30,0:31:23.90:0,24,199	0/0:13,0:13:6:0,6,52	0/1:25,0:25:6.69:7,0,88	0/0:18,0:18:5.99:0,6,50	1/1:12,1:13:6.02:64,6,0	1/1:9,3:11:11.06:103,11,0	0/1:26,7:32:12.27:154,0,12	0/0:16,0:16:6.02:0,6,67	0/0:15,0:13:9.02:0,9,99	0/0:41,0:39:50.39:0,50,442	0/0:13,0:12:5.74:0,6,37	0/0:27,0:27:43.24:0,43,401	0/0:12,0:12:27.02:0,27,261	0/0:10,0:9:11.98:0,12,98
chr10	17638752	.	G	GTA	5585.97	PASS	AB=0.704;AC=42;AF=0.750;AN=56;BaseQRankSum=-3.124;DP=455;FS=7.721;HRun=0;HaplotypeScore=96.6695;InbreedingCoeff=0.3766;MQ=61.50;MQ0=14;MQRankSum=-0.117;QD=13.90;ReadPosRankSum=2.373;VQSLOD=4.3838;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:28:16.87:366,17,0	0/1:1,0:7:11.08:31,0,11	0/0:14,0:10:29.81:0,30,276	0/0:26,0:18:44.93:0,45,443	1/1:5,0:6:11.76:150,12,0	1/1:5,0:3:9:97,9,0	1/1:8,17:25:8.97:96,9,0	1/1:14,0:13:32.55:266,33,0	0/0:8,0:8:14.97:0,15,121	0/1:4,0:14:1.49:162,0,1	1/1:8,1:11:29.87:296,30,0	1/1:15,0:15:3.07:171,3,0	0/1:19,0:19:94.64:130,0,95	0/1:7,11:17:25.93:53,0,26	1/1:25,0:28:48.91:445,49,0	1/1:4,0:14:9.03:110,9,0	1/1:14,0:17:26.55:307,27,0	0/1:4,0:14:13.97:31,0,14	1/1:12,0:11:32.61:268,33,0	1/1:11,0:9:23.46:156,23,0	1/1:22,0:22:23.82:242,24,0	0/1:8,1:9:2.62:61,0,3	0/0:5,0:4:6.96:0,7,23	1/1:23,8:30:30.44:630,30,0	1/1:5,0:12:3.01:32,3,0	1/1:29,0:32:90.31:873,90,0	1/1:17,0:21:48.11:538,48,0	1/1:3,0:11:6.02:74,6,0
chr10	17639127	.	T	TCCTTC	6582.19	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-6.767;DP=440;FS=8.881;HRun=0;HaplotypeScore=101.1008;InbreedingCoeff=0.9172;MQ=72.05;MQ0=7;MQRankSum=-1.360;QD=38.95;ReadPosRankSum=1.360;VQSLOD=4.5504;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:16,5:22:50.97:918,51,0	0/0:5,0:5:15.03:0,15,228	0/0:46,0:23:24.57:0,25,185	0/0:47,0:26:11.69:0,12,224	0/0:12,0:12:23.97:0,24,409	1/1:2,6:8:12.04:354,12,0	1/1:1,14:15:24.08:709,24,0	0/0:24,0:24:45.09:0,45,774	0/0:14,0:14:29.92:0,30,501	0/0:14,0:14:30.09:0,30,518	0/0:9,0:9:18.06:0,18,353	1/1:7,9:16:39.12:960,39,0	1/1:9,3:12:20.96:432,21,0	1/1:1,5:6:6.02:177,6,0	1/1:2,12:14:24.08:710,24,0	1/1:3,13:17:18.06:487,18,0	0/0:12,0:12:26.99:0,27,385	1/1:3,5:8:3.90:91,4,0	0/0:11,0:10:18.03:0,18,228	0/0:11,0:11:12.04:0,12,235	0/0:27,0:27:48.48:0,48,1011	1/1:11,5:16:44.90:743,45,0	1/1:7,0:6:8.95:81,9,0	1/1:12,5:17:39.01:743,39,0	1/1:3,7:11:6.02:177,6,0	0/0:15,0:15:37.52:0,38,529	0/0:16,0:15:38.81:0,39,601	0/0:6,0:6:11.91:0,12,122
chr10	17639154	.	TCTCTGTTCCCCTCCCCTCCCCTTCC	T	5177.46	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=-0.368;DP=366;FS=25.642;HRun=0;HaplotypeScore=230.8338;InbreedingCoeff=0.8529;MQ=90.92;MQ0=6;MQRankSum=-4.828;QD=65.54;ReadPosRankSum=1.327;VQSLOD=2.9420;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:16,0:16:40.08:40,0,2064	1/1:3,0:3:6.02:76,6,0	0/0:50,0:28:38.97:0,39,1052	0/0:72,0:37:13.40:0,13,826	1/1:10,2:12:30.10:808,30,0	0/0:6,0:6:18.06:0,18,872	0/0:10,0:10:30.10:0,30,792	0/0:17,0:17:45.13:0,45,1463	0/0:9,0:9:27.09:0,27,1295	1/1:11,0:11:27.09:826,27,0	1/1:4,2:6:18.06:613,18,0	0/0:14,0:14:36.12:0,36,1530	0/0:8,0:8:24.07:0,24,926	0/0:4,0:4:12.04:0,12,698	0/0:10,0:10:27.08:0,27,1183	0/0:10,0:10:24.08:0,24,1470	1/1:6,1:7:21.07:559,21,0	0/0:5,0:5:14.92:0,15,519	0/0:6,0:6:15.05:0,15,708	0/0:6,0:5:15.05:0,15,933	0/0:23,0:23:57.19:0,57,2920	0/0:8,0:8:12.04:0,12,677	0/0:7,0:5:8.98:0,9,485	0/0:8,0:8:24.08:0,24,774	0/0:9,0:9:21.07:0,21,1285	1/1:8,3:11:33.10:1114,33,0	1/1:8,1:9:27.08:707,27,0	1/1:3,1:4:9.03:435,9,0
chr10	17639178	.	C	CT	389.57	PASS	AB=0.918;AC=8;AF=0.143;AN=56;BaseQRankSum=6.306;DP=334;FS=1.823;HRun=2;HaplotypeScore=110.6945;InbreedingCoeff=-0.1757;MQ=90.04;MQ0=5;MQRankSum=-2.618;QD=2.43;ReadPosRankSum=0.548;VQSLOD=-0.3517;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:33.11:0,33,459	0/0:2,0:2:5.94:0,6,41	0/1:37,1:24:10.01:10,0,416	0/1:57,1:25:21.33:21,0,191	0/0:11,2:13:16.73:0,17,103	0/0:6,0:6:18.02:0,18,230	0/0:7,0:7:18.06:0,18,246	0/0:18,0:18:50.26:0,50,634	0/0:9,0:9:27.06:0,27,343	0/1:14,1:15:4.47:4,0,186	0/1:5,3:8:31.75:175,0,32	0/0:16,0:16:48.15:0,48,648	0/0:6,0:6:18.06:0,18,251	0/0:5,0:5:15.05:0,15,208	0/0:7,0:7:21.03:0,21,272	0/0:11,0:11:27.08:0,27,359	0/1:10,1:11:61.19:61,0,144	0/0:4,0:4:9.03:0,9,126	0/0:5,0:5:9.03:0,9,126	0/0:6,0:6:15.05:0,15,210	0/0:17,0:17:43.39:0,43,590	0/0:4,0:4:12.04:0,12,168	0/0:3,0:3:9.03:0,9,126	0/0:11,0:11:27.09:0,27,369	0/0:12,0:12:30.10:0,30,419	0/1:12,1:13:92.20:172,0,92	0/1:10,1:11:40.19:40,0,103	0/1:4,0:4:35.17:35,0,45
chr10	17639203	.	C	CT	7832.63	PASS	AB=0.800;AC=42;AF=0.750;AN=56;BaseQRankSum=-0.797;DP=313;FS=15.833;HRun=0;HaplotypeScore=80.9993;InbreedingCoeff=0.7804;MQ=72.51;MQ0=4;MQRankSum=-2.751;QD=35.28;ReadPosRankSum=5.334;VQSLOD=3.2639;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,11:12:27.06:404,27,0	1/1:0,4:4:9.03:143,9,0	0/1:28,0:14:6.81:7,0,218	0/0:49,1:21:17.53:0,18,272	1/1:3,12:15:18.70:502,19,0	1/1:0,5:5:15.05:240,15,0	1/1:0,9:9:27.09:430,27,0	0/0:15,0:15:42.14:0,42,579	0/0:7,0:7:21.06:0,21,277	1/1:1,16:17:51.15:788,51,0	1/1:2,9:11:24.08:382,24,0	1/1:1,12:14:39.08:577,39,0	0/1:2,4:6:3.02:196,0,3	1/1:1,4:5:8.96:112,9,0	1/1:0,6:6:18.06:286,18,0	1/1:0,6:6:18.06:288,18,0	1/1:1,10:11:33.07:476,33,0	1/1:1,4:5:9.03:143,9,0	0/0:3,0:3:9.03:0,9,120	0/0:3,0:3:8.97:0,9,87	0/0:13,0:13:36.12:0,36,503	1/1:0,5:5:15.05:228,15,0	1/1:0,6:6:15.04:240,15,0	1/1:1,11:12:11.13:407,11,0	1/1:2,11:13:33.11:527,33,0	1/1:0,16:16:48.13:732,48,0	1/1:1,10:11:33.07:497,33,0	1/1:0,5:5:15.05:228,15,0
chr10	17639242	.	C	CCCCTT	6234.05	PASS	AB=0.954;AC=35;AF=0.625;AN=56;BaseQRankSum=-4.676;DP=343;FS=5.165;HRun=0;HaplotypeScore=95.9262;InbreedingCoeff=-0.1405;MQ=76.84;MQ0=7;MQRankSum=-2.074;QD=21.65;ReadPosRankSum=-0.987;VQSLOD=3.9665;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:8,0:9:86.95:87,0,121	1/1:4,0:5:14.98:282,15,0	0/0:45,0:17:31.11:0,31,261	0/1:67,0:29:18.33:18,0,183	1/1:9,5:14:32.96:675,33,0	0/1:7,0:7:24.32:47,0,24	0/1:10,0:10:38.08:38,0,104	0/1:6,0:6:5.34:5,0,62	0/0:7,0:7:17.98:0,18,288	1/1:10,5:15:38.99:848,39,0	1/1:6,4:10:27.07:591,27,0	0/1:8,0:9:27.24:27,0,56	0/1:10,0:11:99:121,0,118	0/1:4,0:4:13.87:14,0,26	1/1:7,0:6:7.97:141,8,0	0/1:7,0:7:13.99:14,0,64	1/1:9,2:11:29.86:544,30,0	0/1:5,0:5:7.43:40,0,7	1/1:1,0:1:3.01:54,3,0	0/0:3,0:3:2.09:0,2,23	0/1:8,0:8:6.48:170,0,6	0/1:10,1:13:1.59:210,0,2	0/1:7,0:8:83.43:85,0,83	0/1:18,0:18:39.48:209,0,39	0/1:7,0:8:49.55:50,0,68	1/1:9,9:18:44.79:1031,45,0	1/1:4,8:12:33.03:830,33,0	1/1:5,0:5:11.93:102,12,0
chr10	17639444	.	C	CTGTG	6124.18	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-4.682;DP=672;FS=1.623;HRun=0;HaplotypeScore=125.6292;InbreedingCoeff=0.8871;MQ=68.97;MQ0=27;MQRankSum=-0.256;QD=20.35;ReadPosRankSum=1.371;VQSLOD=4.5182;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:17,17:37:17:327,17,0	0/0:1,0:2:6.01:0,6,56	0/0:64,0:23:48.58:0,49,805	0/0:65,0:30:66.16:0,66,1058	0/0:7,0:8:2.97:0,3,28	1/1:6,15:26:21.07:428,21,0	1/1:17,17:35:12.05:505,12,0	0/0:30,0:30:65.66:0,66,1006	0/0:26,0:26:62.40:0,62,886	0/0:12,0:13:21.02:0,21,213	0/0:3,0:10:8.73:0,9,76	1/1:11,13:29:29.89:640,30,0	1/1:7,6:13:14.84:355,15,0	1/1:12,0:12:0.47:1,0,0	1/1:6,13:21:18.06:399,18,0	1/1:6,12:20:26.47:511,26,0	0/0:6,0:32:46.56:0,47,423	1/1:5,9:17:18.06:456,18,0	0/0:22,0:21:39.10:0,39,620	0/0:4,0:4:9.03:0,9,140	0/0:58,0:57:95.55:0,96,1542	1/1:4,8:14:9.02:211,9,0	1/1:4,7:12:9.03:212,9,0	1/1:18,29:51:66.13:1568,66,0	1/1:10,1:11:21.07:510,21,0	0/0:5,0:17:29.63:0,30,264	0/0:0,0:12:18.03:0,18,181	0/0:6,0:7:12.01:0,12,112
chr10	17639452	.	GTGGT	G	931.90	PASS	AB=0.873;AC=10;AF=0.179;AN=56;BaseQRankSum=-0.514;DP=670;FS=4.214;HRun=0;HaplotypeScore=131.9367;InbreedingCoeff=-0.1478;MQ=62.41;MQ0=32;MQRankSum=1.395;QD=5.58;ReadPosRankSum=-0.351;VQSLOD=2.5961;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:36:16:0,16,293	0/1:5,0:4:5.48:13,0,5	0/0:59,0:18:47.76:0,48,710	0/0:61,0:26:65.08:0,65,994	0/1:5,6:12:15.14:15,0,37	0/0:25,0:25:17.47:0,17,196	0/1:31,0:31:34.46:34,0,306	0/0:33,0:33:90.70:0,91,1549	0/0:26,0:25:24.64:0,25,441	0/1:5,8:13:90.01:200,0,90	0/1:10,0:10:20.82:31,0,21	0/0:23,0:23:29.33:0,29,449	0/0:14,0:13:20.61:0,21,317	0/0:13,0:13:3.01:0,3,43	0/1:24,0:24:2.68:3,0,380	0/0:21,0:21:35.01:0,35,451	0/1:32,3:34:72.84:180,0,73	0/0:21,0:20:2.63:0,3,430	0/0:18,0:17:48.09:0,48,746	0/0:4,0:4:9.03:0,9,229	0/0:60,0:59:99:0,102,1899	0/0:14,0:14:6.91:0,7,126	0/0:12,0:12:14.72:0,15,239	0/0:47,0:47:73.89:0,74,1246	0/0:14,0:13:23.94:0,24,306	0/1:15,0:15:5.55:373,0,6	0/1:13,0:13:42.91:47,0,43	0/1:2,6:8:37.51:173,0,38
chr10	17639454	.	G	GT	1467.10	PASS	AB=0.926;AC=14;AF=0.250;AN=56;BaseQRankSum=7.326;DP=674;FS=1.499;HRun=1;HaplotypeScore=109.3489;InbreedingCoeff=-0.1582;MQ=61.57;MQ0=32;MQRankSum=-0.635;QD=5.02;ReadPosRankSum=6.276;VQSLOD=0.5936;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:35,0:34:14.38:52,0,14	0/0:6,0:5:7.24:0,7,38	0/0:59,0:18:49.23:0,49,634	0/0:60,0:25:72.14:0,72,903	0/0:12,0:12:5.90:0,6,56	0/1:23,2:25:16.48:218,0,16	0/1:26,5:31:59.23:213,0,59	0/0:34,0:34:60.82:0,61,891	0/0:10,0:25:63.25:0,63,583	0/0:14,0:13:25:0,25,188	0/1:10,0:10:1.54:2,0,12	0/1:19,3:22:7.68:144,0,8	0/1:13,1:13:44.43:77,0,44	0/0:3,0:13:2.91:0,3,40	0/1:23,0:23:91.02:91,0,220	0/1:21,2:23:97.37:97,0,174	0/0:34,1:34:49.45:0,49,294	0/1:19,1:20:82.87:83,0,146	0/0:18,0:18:53.50:0,54,636	0/0:2,0:4:5.70:0,6,82	0/0:39,3:63:82.01:0,82,1111	1/1:12,1:13:6.91:53,7,0	0/1:12,1:12:38.48:51,0,38	0/1:42,4:48:33.59:333,0,34	0/1:11,3:13:49.42:205,0,49	0/0:15,0:15:13.33:0,13,70	0/0:13,0:13:22.03:0,22,145	0/0:8,0:8:12.72:0,13,79
chr10	17639642	.	TA	T	10784.67	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=8.673;DP=395;FS=7.729;HRun=1;HaplotypeScore=49.3812;InbreedingCoeff=0.9864;MQ=81.80;MQ0=0;MQRankSum=-1.680;QD=38.11;ReadPosRankSum=6.058;VQSLOD=4.5720;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,34:34:93.31:1299,93,0	1/1:0,6:6:15.05:206,15,0	0/0:14,0:14:42.09:0,42,610	0/0:12,0:12:26.17:0,26,405	1/1:0,11:11:27.09:377,27,0	1/1:0,17:17:48.16:671,48,0	1/1:0,16:16:42.14:587,42,0	0/0:22,0:22:66.21:0,66,1009	0/0:24,0:24:69.13:0,69,1066	1/1:0,15:15:45.15:628,45,0	1/1:0,6:6:12:146,12,0	1/1:0,24:24:72.24:1007,72,0	1/1:0,8:8:24.08:335,24,0	1/1:0,8:8:18.06:251,18,0	1/1:0,11:11:33.11:461,33,0	1/1:0,13:13:33.11:461,33,0	1/1:0,13:13:39.13:545,39,0	1/1:0,25:25:69.23:964,69,0	0/0:8,0:8:21.03:0,21,308	0/0:11,0:11:33.09:0,33,489	0/0:21,0:21:60.19:0,60,934	1/1:0,11:11:30.10:419,30,0	1/1:0,9:9:24.08:335,24,0	1/1:0,19:19:48.16:671,48,0	1/1:0,9:9:24.08:335,24,0	1/1:0,12:12:33.11:460,33,0	1/1:0,8:8:24.08:335,24,0	1/1:0,8:8:21.07:292,21,0
chr10	17640006	.	T	TTG	23794.48	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=-15.450;DP=706;FS=0.688;HRun=0;HaplotypeScore=69.9753;InbreedingCoeff=0.9939;MQ=81.89;MQ0=8;MQRankSum=-2.186;QD=45.50;ReadPosRankSum=5.899;VQSLOD=5.9831;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,52:58:99:2583,144,0	1/1:2,11:13:30.10:538,30,0	0/0:22,0:22:51.17:0,51,710	0/0:19,0:19:54.15:0,54,731	1/1:1,35:36:99:1782,99,0	1/1:0,19:18:42.14:756,42,0	1/1:2,25:27:60.21:1080,60,0	0/0:31,0:31:72.24:0,72,1008	0/0:20,0:20:54.18:0,54,756	1/1:0,23:22:63.22:1128,63,0	1/1:0,9:9:27.09:486,27,0	1/1:1,14:15:36.12:648,36,0	1/1:0,15:15:42.14:756,42,0	1/1:2,29:31:81.28:1459,81,0	1/1:1,25:25:69.24:1243,69,0	1/1:2,11:13:27.09:486,27,0	1/1:5,45:52:99:2214,123,0	1/1:0,26:27:60.21:1081,60,0	0/0:15,0:15:39.13:0,39,546	0/0:19,0:19:51.16:0,51,696	0/0:57,0:57:99:0,160,2210	1/1:0,18:16:48.16:864,48,0	1/1:1,15:17:42.14:739,42,0	1/1:2,43:44:99:2214,123,0	1/1:0,14:15:42.14:755,42,0	1/1:4,32:36:96.30:1684,96,0	1/1:0,22:22:60.21:1081,60,0	1/1:0,4:4:12.04:216,12,0
chr10	17641155	.	TC	T	770.26	PASS	AB=1.000;AC=15;AF=0.288;AN=52;BaseQRankSum=3.058;DP=330;FS=6.393;HRun=13;HaplotypeScore=58.0258;InbreedingCoeff=0.5698;MQ=80.01;MQ0=1;MQRankSum=-0.624;QD=5.88;ReadPosRankSum=3.857;VQSLOD=1.9641;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:20,6:27:25.81:180,26,0	0/0:1,0:1:2.96:0,3,19	0/1:20,0:11:1.90:2,0,72	0/0:22,0:18:14.31:0,14,81	0/0:5,0:5:0:0,0,0	0/0:9,0:11:8.95:0,9,68	0/0:17,0:18:22.98:0,23,146	0/0:12,0:12:5.54:0,6,25	0/0:6,0:6:8.84:0,9,56	0/0:9,0:9:5.99:0,6,50	./.	1/1:6,11:19:36.69:244,37,0	1/1:7,3:11:11.82:82,12,0	1/1:10,1:12:7.89:49,8,0	0/0:8,0:8:11.89:0,12,87	0/0:9,0:9:2.99:0,3,24	0/0:15,0:15:11.40:0,11,61	0/0:15,0:15:8.93:0,9,66	0/0:7,0:7:2.80:0,3,13	./.	0/0:26,0:26:10.31:0,10,45	1/1:6,1:8:5:28,5,0	1/1:3,1:4:1.23:3,1,0	1/1:14,15:30:37.70:340,38,0	0/0:9,0:9:2.92:0,3,17	0/0:4,0:4:3.46:0,3,25	0/0:9,0:13:2.95:0,3,19	0/0:5,0:5:2.94:0,3,18
chr10	17641160	.	C	CCCA	321.65	PASS	AB=1.000;AC=8;AF=0.154;AN=52;BaseQRankSum=0.123;DP=337;FS=11.673;HRun=0;HaplotypeScore=77.8454;InbreedingCoeff=0.5576;MQ=81.75;MQ0=1;MQRankSum=-0.459;QD=5.03;ReadPosRankSum=1.456;VQSLOD=1.1197;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:74.83:0,75,666	0/0:1,0:1:2.97:0,3,20	0/0:26,0:16:19.75:0,20,243	0/0:19,0:15:23.09:0,23,212	0/0:5,0:5:6:0,6,53	0/0:10,0:10:23.85:0,24,187	0/0:22,0:22:17.20:0,17,202	1/1:5,6:11:9.44:132,9,0	0/1:5,0:5:6.31:6,0,51	0/0:9,0:9:11.97:0,12,99	./.	0/0:18,0:18:45.06:0,45,460	0/0:10,0:10:20.96:0,21,191	0/0:12,0:12:32.97:0,33,290	0/0:9,0:9:20.96:0,21,178	0/0:10,0:10:17.22:0,17,137	0/1:13,0:13:13.44:13,0,58	0/0:12,0:12:18.18:0,18,152	1/1:1,3:5:11.93:124,12,0	./.	1/1:6,19:30:10.46:180,10,0	0/0:10,0:10:14.97:0,15,133	0/0:7,0:7:9:0,9,78	0/0:30,0:30:77.95:0,78,785	0/0:9,0:9:9.81:0,10,80	0/0:4,0:4:7.56:0,8,57	0/0:11,0:11:14.92:0,15,113	0/0:3,0:3:0.89:0,1,2
chr10	17641442	.	AAG	A	108.96	PASS	AB=0.877;AC=7;AF=0.125;AN=56;BaseQRankSum=4.570;DP=262;FS=4.570;HRun=0;HaplotypeScore=47.0149;InbreedingCoeff=-0.1661;MQ=49.59;MQ0=26;MQRankSum=-3.306;QD=1.42;ReadPosRankSum=-1.134;VQSLOD=1.0107;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,1:19:41.62:0,42,874	0/0:1,0:1:3.01:0,3,61	0/0:4,0:2:6.02:0,6,121	0/1:13,0:7:1.56:2,0,247	0/0:8,2:7:15.01:0,15,263	0/0:10,4:13:23.91:0,24,423	0/1:22,2:22:35.01:35,0,996	0/0:13,1:11:23.19:0,23,347	0/0:7,0:5:12.04:0,12,244	0/1:8,2:8:25.74:26,0,297	0/0:2,0:1:3.01:0,3,61	0/0:5,0:4:5.38:0,5,62	0/1:4,1:5:9.62:10,0,114	0/0:12,0:10:24.51:0,25,448	0/0:5,1:5:9.03:0,9,180	0/1:3,2:5:3.85:4,0,113	0/0:7,0:6:18.06:0,18,358	0/1:10,0:9:35.61:36,0,400	0/0:12,0:7:21.07:0,21,363	0/0:9,0:8:19.74:0,20,309	0/0:9,0:8:20.99:0,21,343	0/0:5,0:5:12.04:0,12,242	0/0:5,0:4:2.99:0,3,61	0/0:11,0:10:21.07:0,21,361	0/0:10,1:11:24.89:0,25,323	0/0:12,1:10:30.10:0,30,584	0/1:7,2:10:99:114,0,313	0/0:6,1:6:15.05:0,15,304
chr10	17641596	.	CAA	C	1663.65	PASS	AB=0.833;AC=24;AF=0.429;AN=56;BaseQRankSum=1.128;DP=439;FS=9.639;HRun=15;HaplotypeScore=70.1616;InbreedingCoeff=0.8508;MQ=62.05;MQ0=3;MQRankSum=0.099;QD=8.90;ReadPosRankSum=2.398;VQSLOD=1.0172;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:41:83.21:0,83,868	1/1:3,5:10:8.62:109,9,0	0/1:18,0:5:4.02:19,0,4	0/0:25,1:14:10.68:0,11,97	1/1:8,7:16:17.50:138,17,0	0/0:6,0:20:33.05:0,33,358	0/0:3,0:16:24.03:0,24,226	1/1:8,1:22:33.04:156,33,0	0/0:8,0:17:21:0,21,215	1/1:4,8:13:23.76:218,24,0	0/1:6,4:12:1.15:115,0,1	0/0:4,0:7:17.24:0,17,199	0/0:15,0:16:33:0,33,374	0/0:13,0:14:29.42:0,29,272	0/0:3,0:10:27.05:0,27,293	0/0:11,0:16:35.95:0,36,340	1/1:6,12:19:0.93:286,1,0	0/0:10,0:14:35.93:0,36,338	1/1:6,0:14:17.24:73,17,0	1/1:3,2:10:19.70:112,20,0	1/1:2,0:12:19.21:82,19,0	0/0:15,0:15:39.10:0,39,485	0/0:8,0:9:21.39:0,21,210	0/0:13,0:14:31.98:0,32,300	0/0:6,0:16:24.02:0,24,235	1/1:3,11:14:23.85:207,24,0	1/1:7,8:15:20.53:170,21,0	1/1:3,7:11:23.68:193,24,0
chr10	17644693	.	TTGTGTGTGTGTGTG	T	1505.89	PASS	AB=0.835;AC=16;AF=0.296;AN=54;BaseQRankSum=2.945;DP=502;FS=6.811;HRun=0;HaplotypeScore=199.1472;InbreedingCoeff=0.1613;MQ=69.29;MQ0=9;MQRankSum=-3.845;QD=8.32;ReadPosRankSum=0.419;VQSLOD=2.0300;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:32:14.74:0,15,114	0/1:4,0:11:3.58:4,0,90	./.	0/0:32,0:25:3.90:0,4,43	0/0:12,0:15:9.02:0,9,111	1/1:9,10:20:6.02:234,6,0	1/1:14,0:13:12.03:158,12,0	0/0:25,0:25:20.90:0,21,233	0/0:11,0:15:3:0,3,25	0/1:14,0:13:11.32:11,0,133	0/0:12,0:12:6:0,6,79	0/1:20,0:19:16.50:17,0,95	0/1:13,0:13:1.41:1,0,90	0/0:11,0:11:6:0,6,62	1/1:12,8:21:6.02:215,6,0	1/1:3,8:11:12.04:468,12,0	0/1:15,0:19:99:163,0,160	0/0:10,9:18:5.91:0,6,40	0/0:15,0:15:14.54:0,15,439	0/0:17,0:27:30.07:0,30,975	0/0:24,0:29:30.06:0,30,843	0/0:11,0:10:11.95:0,12,100	0/0:14,0:13:5.96:0,6,44	0/0:20,0:20:2.59:0,3,13	0/1:6,6:12:18.95:337,0,19	0/0:8,0:17:11.02:0,11,412	0/1:20,0:21:43.59:44,0,202	0/1:2,0:4:11.65:12,0,17
chr10	17644737	.	GTGTGT	G	342.22	PASS	AB=0.952;AC=15;AF=0.268;AN=56;BaseQRankSum=9.315;DP=537;FS=0.000;HRun=0;HaplotypeScore=136.0640;InbreedingCoeff=0.2650;MQ=50.80;MQ0=20;MQRankSum=-3.678;QD=1.81;ReadPosRankSum=4.516;VQSLOD=2.0081;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,3:25:3.45:0,3,11	0/0:16,0:16:17.15:0,17,396	0/0:30,0:5:15.04:0,15,179	0/0:30,0:9:24.02:0,24,278	0/0:18,0:17:30.10:0,30,403	0/1:23,0:23:10.12:10,0,295	0/1:21,0:21:7.59:8,0,401	0/0:23,0:22:65.24:0,65,848	0/0:13,0:12:11.92:0,12,163	0/0:15,0:14:41.87:0,42,517	0/0:15,0:14:30.10:0,30,406	0/1:8,8:16:24.86:80,0,25	1/1:6,4:9:8.42:122,8,0	1/1:6,2:7:4.77:63,5,0	0/1:16,0:16:16.43:16,0,219	0/1:19,0:19:37.91:38,0,364	0/1:23,0:22:38.09:38,0,501	0/0:26,0:24:38.31:0,38,474	0/0:12,0:12:35.93:0,36,505	0/0:22,0:22:46.03:0,46,647	0/0:29,0:28:61.44:0,61,896	1/1:1,3:12:3.01:47,3,0	0/0:10,2:11:0.30:0,0,0	1/1:18,1:19:13.98:67,14,0	0/1:21,0:21:15.33:15,0,442	0/0:28,0:27:56.03:0,56,909	0/0:20,0:20:36.04:0,36,563	0/0:14,0:13:13.92:0,14,386
chr10	17644741	.	GTC	G	481.02	PASS	AB=0.910;AC=15;AF=0.268;AN=56;BaseQRankSum=7.934;DP=537;FS=6.706;HRun=0;HaplotypeScore=114.1946;InbreedingCoeff=0.5515;MQ=52.20;MQ0=19;MQRankSum=1.167;QD=2.75;ReadPosRankSum=-1.147;VQSLOD=1.7808;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:3.77:0,4,11	0/0:16,0:16:33.97:0,34,258	0/0:32,0:7:0.51:0,1,95	0/1:33,0:12:26.68:27,0,136	0/0:17,0:16:29.84:0,30,230	0/0:24,0:24:29.44:0,29,226	0/0:18,0:18:32.61:0,33,269	0/0:24,0:23:60.26:0,60,528	0/0:13,0:12:11.89:0,12,100	0/0:14,0:13:25.32:0,25,252	0/0:15,0:14:29.93:0,30,243	1/1:16,0:16:7.92:76,8,0	1/1:10,0:9:17.84:128,18,0	1/1:10,0:9:17.62:117,18,0	0/0:17,0:17:23.05:0,23,171	0/0:19,0:19:35.49:0,35,253	0/0:21,0:21:34.32:0,34,251	0/0:27,0:25:18.90:0,19,264	0/1:13,0:13:0.35:0,0,194	0/1:20,0:20:1.96:2,0,149	0/1:30,1:30:63.08:63,0,282	1/1:12,0:11:2.99:23,3,0	0/1:3,8:10:0.07:0,0,0	1/1:19,0:19:26.79:207,27,0	0/0:22,0:22:42.34:0,42,336	0/0:28,0:27:52.24:0,52,491	0/0:18,0:18:26.98:0,27,305	0/0:14,0:13:31.21:0,31,232
chr10	17644745	.	G	GCGCA	1187.36	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=3.511;DP=555;FS=1.617;HRun=0;HaplotypeScore=132.0047;InbreedingCoeff=0.8859;MQ=53.79;MQ0=17;MQRankSum=-0.644;QD=10.60;ReadPosRankSum=-0.248;VQSLOD=3.1293;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,16:26:2.59:10,3,0	0/0:16,0:16:35.95:0,36,654	0/0:32,0:7:21.07:0,21,406	0/0:36,0:15:39.13:0,39,787	0/0:18,0:17:35.79:0,36,662	0/0:25,0:25:36.12:0,36,717	0/0:19,0:19:36.12:0,36,753	0/0:24,0:23:65.11:0,65,1176	0/0:13,0:13:11.91:0,12,251	0/0:14,0:13:39.08:0,39,704	0/0:15,0:14:33.11:0,33,691	1/1:18,1:19:8.77:86,9,0	1/1:11,0:10:16.20:232,16,0	1/1:11,0:10:17.80:370,18,0	0/0:18,0:18:27.09:0,27,544	0/0:20,0:20:45.15:0,45,903	0/0:21,0:21:29.71:0,30,943	0/0:28,0:27:45.15:0,45,881	0/0:15,0:15:36.07:0,36,675	0/0:18,0:18:42.14:0,42,878	0/0:30,0:29:66.22:0,66,1302	1/1:15,0:13:6.39:42,6,0	0/1:13,0:12:0.11:0,0,0	1/1:17,0:17:27.05:615,27,0	0/0:22,0:22:51.16:0,51,1000	0/0:27,0:26:66.47:0,66,1222	0/0:18,0:18:30.43:0,30,882	0/0:14,0:13:33.11:0,33,685
chr10	17645936	.	A	AACTG	19761.14	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=14.839;DP=728;FS=7.119;HRun=0;HaplotypeScore=132.1995;InbreedingCoeff=0.9999;MQ=83.76;MQ0=0;MQRankSum=-6.691;QD=60.99;ReadPosRankSum=3.797;VQSLOD=6.4998;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,35:40:96.33:2514,96,0	0/0:11,0:11:30.10:0,30,552	0/0:35,0:35:95.96:0,96,1619	0/0:21,0:21:57.13:0,57,945	0/0:22,0:22:63.22:0,63,1151	1/1:4,19:24:54.19:1426,54,0	1/1:7,16:23:39.13:1006,39,0	0/0:36,0:36:99:0,102,1777	0/0:22,0:22:63.22:0,63,1159	0/0:26,0:26:69.24:0,69,1269	0/0:21,0:21:60.21:0,60,1086	1/1:3,19:22:57.20:1496,57,0	1/1:1,20:22:60.21:1584,60,0	1/1:2,19:21:60.21:1568,60,0	1/1:2,20:23:63.22:1651,63,0	1/1:8,28:39:81.28:2090,81,0	0/0:27,0:27:78.27:0,78,1435	1/1:2,14:17:39.13:1015,39,0	0/0:27,0:27:78.27:0,78,1410	0/0:43,0:43:99:0,123,2195	0/0:33,0:33:96.31:0,96,1705	1/1:2,17:19:42.14:1108,42,0	1/1:5,22:27:57.20:1476,57,0	1/1:2,16:19:45.15:1180,45,0	1/1:5,22:28:63.22:1649,63,0	0/0:30,0:30:87.29:0,87,1573	0/0:33,0:32:93.32:0,93,1708	0/0:17,0:17:51.17:0,51,930
chr10	17647275	.	T	TGC	708.14	PASS	AB=0.906;AC=8;AF=0.143;AN=56;BaseQRankSum=-3.094;DP=755;FS=0.000;HRun=0;HaplotypeScore=148.0583;InbreedingCoeff=0.3895;MQ=55.82;MQ0=45;MQRankSum=-2.433;QD=4.29;ReadPosRankSum=-2.121;VQSLOD=2.5727;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:40:40.44:0,40,401	0/0:10,0:9:19.78:0,20,150	0/0:73,0:12:26.14:0,26,270	0/0:77,0:24:39.77:0,40,399	0/0:23,0:22:41.80:0,42,331	0/0:16,0:16:29.73:0,30,240	0/0:27,0:27:67.70:0,68,547	0/1:38,0:37:23.43:436,0,23	0/1:25,0:24:3.65:4,0,77	0/0:21,0:21:48.23:0,48,395	0/0:15,0:15:35.86:0,36,281	0/1:22,0:22:10.84:11,0,63	0/0:27,0:27:3.85:0,4,144	0/0:23,0:21:27.80:0,28,259	0/0:22,0:22:59.90:0,60,487	0/0:24,0:24:56.57:0,57,459	0/0:36,0:36:80.28:0,80,622	0/0:19,0:18:50.79:0,51,393	1/1:15,0:13:9.01:157,9,0	1/1:16,1:16:15.18:137,15,0	0/1:19,25:46:28.46:99,0,28	0/0:20,0:20:18.39:0,18,176	0/0:14,0:13:20.30:0,20,155	0/0:38,0:37:41.05:0,41,333	0/0:18,0:16:29.55:0,30,230	0/0:20,0:19:47.85:0,48,400	0/0:19,0:19:53.81:0,54,420	0/0:7,0:6:14.94:0,15,116
chr10	17649010	.	GCCACCACCACCACCA	G	5509.11	PASS	AB=0.759;AC=35;AF=0.700;AN=50;BaseQRankSum=5.730;DP=353;FS=3.748;HRun=0;HaplotypeScore=151.2365;InbreedingCoeff=-0.1149;MQ=68.88;MQ0=1;MQRankSum=-0.547;QD=20.79;ReadPosRankSum=-0.338;VQSLOD=3.9346;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:18,1:19:3.01:125,3,0	0/1:3,0:5:29.74:80,0,30	./.	0/0:16,0:11:4.69:0,5,20	1/1:6,0:7:0.89:2,1,0	0/1:7,0:12:62.58:202,0,63	0/1:9,0:12:34:34,0,69	1/1:16,0:15:5.91:97,6,0	1/1:5,7:13:15.05:543,15,0	0/0:11,0:11:4.73:0,5,44	./.	1/1:3,17:20:42.14:1744,42,0	1/1:6,4:10:12.04:498,12,0	1/1:8,4:12:12.04:498,12,0	0/1:11,1:17:19.71:285,0,20	0/1:6,0:9:38.75:161,0,39	1/1:10,0:14:9.03:134,9,0	1/1:3,0:5:3.01:45,3,0	1/1:8,2:10:5.98:67,6,0	./.	0/0:28,3:31:0:0,0,0	1/1:8,3:11:6.02:243,6,0	1/1:3,1:4:3.01:123,3,0	1/1:9,3:12:3.01:125,3,0	0/1:8,1:12:41.03:159,0,41	0/1:20,0:28:99:231,0,169	0/1:12,0:13:35.77:36,0,64	0/1:2,0:4:28.79:80,0,29
chr10	17649421	.	A	ATT	4364.52	PASS	AB=0.867;AC=21;AF=0.375;AN=56;BaseQRankSum=-1.887;DP=550;FS=3.168;HRun=10;HaplotypeScore=79.9869;InbreedingCoeff=0.7806;MQ=85.51;MQ0=5;MQRankSum=0.252;QD=19.06;ReadPosRankSum=-1.900;VQSLOD=3.7028;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,111,1110	0/1:8,0:8:5.73:6,0,133	0/0:35,0:23:41.23:0,41,374	0/1:33,0:25:34.13:34,0,114	0/0:16,0:17:32.76:0,33,388	1/1:2,15:17:36.12:537,36,0	1/1:2,20:23:60.20:896,60,0	1/1:4,0:24:47.42:183,47,0	0/0:16,0:17:47.82:0,48,461	0/0:23,0:23:51.08:0,51,519	0/0:16,0:16:36.07:0,36,366	0/0:16,0:16:45.10:0,45,458	0/0:16,0:16:36.03:0,36,360	0/0:15,0:15:36.06:0,36,366	1/1:1,12:15:38.61:529,39,0	1/1:0,8:8:18.06:268,18,0	0/0:31,0:31:87.17:0,87,885	1/1:4,21:25:57.19:850,57,0	1/1:6,0:31:33.23:203,33,0	1/1:2,0:12:23.34:81,23,0	0/1:4,0:12:35.06:44,0,35	0/0:14,0:14:36.07:0,36,366	0/0:15,0:15:36.05:0,36,366	0/0:13,0:13:36.03:0,36,349	1/1:0,18:20:53.15:734,53,0	0/0:25,0:26:65.86:0,66,653	0/0:14,0:15:32.79:0,33,381	0/0:4,0:4:12.03:0,12,122
chr10	17649737	.	C	CG	12998.92	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-14.049;DP=547;FS=7.205;HRun=1;HaplotypeScore=57.0164;InbreedingCoeff=0.9873;MQ=77.40;MQ0=0;MQRankSum=0.050;QD=38.12;ReadPosRankSum=-1.390;VQSLOD=4.5666;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,126,1594	1/1:0,8:8:24.08:358,24,0	0/0:12,0:12:24.06:0,24,285	0/0:10,0:10:9.81:0,10,219	1/1:0,12:12:27.09:396,27,0	1/1:0,15:15:36.12:539,36,0	1/1:1,33:34:87.29:1303,87,0	1/1:1,14:15:42.09:566,42,0	0/0:19,0:19:54.17:0,54,696	1/1:3,20:23:51.15:720,51,0	1/1:0,13:13:30.10:449,30,0	0/0:27,0:27:81.21:0,81,1010	0/0:16,0:16:48.14:0,48,609	0/0:25,0:25:69.22:0,69,895	1/1:0,16:16:42.14:629,42,0	1/1:0,19:19:50.91:764,51,0	1/1:2,23:25:66.09:988,66,0	1/1:2,32:34:93.32:1393,93,0	1/1:1,17:18:54.08:728,54,0	1/1:0,7:7:18.06:268,18,0	1/1:2,47:49:99:1886,126,0	0/0:7,0:7:18.06:0,18,234	0/0:9,0:9:19.88:0,20,238	0/0:36,0:36:99:0,105,1346	1/1:0,8:8:21.07:315,21,0	1/1:0,23:23:57.15:800,57,0	1/1:0,15:15:39.13:583,39,0	1/1:0,7:7:21.07:314,21,0
chr10	17649953	.	TGA	T	87.35	PASS	AB=0.981;AC=16;AF=0.348;AN=46;BaseQRankSum=0.780;DP=366;FS=18.918;HRun=0;HaplotypeScore=62.5983;InbreedingCoeff=0.0785;MQ=58.38;MQ0=11;MQRankSum=1.890;QD=0.43;ReadPosRankSum=1.150;VQSLOD=-0.0190;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:11,0:11:0:0,0,0	0/0:7,0:7:3.13:0,3,9	./.	./.	0/0:14,0:13:5.99:0,6,66	0/1:9,0:7:0:0,0,0	0/1:20,0:20:0.94:7,0,1	0/1:21,0:21:6.50:6,0,80	./.	0/1:21,0:21:22.49:22,0,63	0/0:7,0:6:0.47:0,0,1	0/0:9,0:9:0.38:0,0,1	1/1:13,0:13:5.59:28,6,0	./.	0/0:9,0:9:0.89:0,1,2	0/1:8,0:7:3.93:16,0,4	0/0:25,0:25:20.11:0,20,215	0/0:10,0:9:11.36:0,11,81	0/1:10,4:14:5.73:43,0,6	1/1:12,2:13:3.01:33,3,0	0/1:22,0:21:15.95:30,0,16	./.	0/1:5,0:4:0:0,0,0	0/0:5,0:5:2.49:0,2,24	0/1:12,0:12:0:0,0,0	0/1:18,0:18:2.09:2,0,66	0/1:13,0:12:8.64:9,0,33	0/0:14,0:14:5.08:0,5,43
chr10	17649993	.	AGG	A	609.06	PASS	AB=0.834;AC=24;AF=0.500;AN=48;BaseQRankSum=-4.874;DP=210;FS=3.922;HRun=3;HaplotypeScore=40.5158;InbreedingCoeff=0.1064;MQ=34.94;MQ0=25;MQRankSum=1.995;QD=4.06;ReadPosRankSum=2.564;VQSLOD=-0.7471;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:7:3.05:0,3,19	1/1:4,1:5:8.36:56,8,0	./.	./.	0/0:10,1:10:1.37:0,1,17	0/0:5,0:4:2.08:0,2,5	0/1:11,1:10:8.93:50,0,9	0/1:17,0:14:15.11:15,0,22	0/0:5,0:4:7.60:0,8,38	1/1:4,1:14:19.40:166,19,0	1/1:7,0:6:2.11:23,2,0	1/1:5,0:5:1.80:8,2,0	0/1:1,6:7:7.54:70,0,8	0/0:3,0:2:0.47:0,0,1	0/0:7,0:6:3.96:0,4,9	0/1:5,1:5:5.71:33,0,6	0/1:12,1:12:36.16:36,0,59	1/1:7,0:6:5.93:27,6,0	0/0:12,0:6:2.10:0,2,43	1/1:8,0:6:1.87:6,2,0	1/1:20,0:15:9.36:62,9,0	./.	0/0:4,0:3:0:0,0,0	0/1:4,0:3:0:1,0,0	./.	0/1:5,6:10:1.85:91,0,2	0/1:5,2:4:9.07:34,0,9	1/1:7,0:6:8.02:60,8,0
chr10	17650003	.	GGAGGGAGGGAGA	G	454.48	PASS	AB=0.916;AC=13;AF=0.283;AN=46;BaseQRankSum=-0.928;DP=190;FS=31.601;HRun=0;HaplotypeScore=60.6020;InbreedingCoeff=0.1546;MQ=34.78;MQ0=23;MQRankSum=0.572;QD=5.11;ReadPosRankSum=2.190;VQSLOD=-0.0940;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:3:5.30:0,5,46	1/1:3,0:3:2.09:16,2,0	./.	./.	0/1:3,8:10:22.26:33,0,22	0/0:7,0:6:8.82:0,9,120	0/0:12,0:11:14.39:0,14,102	0/1:11,0:7:28.73:29,0,62	0/0:10,0:8:10.91:0,11,81	0/1:12,0:12:31.29:182,0,31	0/0:4,6:9:0.95:0,1,2	0/0:4,0:3:3.86:0,4,23	0/0:5,0:5:7.57:0,8,70	0/0:3,0:2:1.25:0,1,3	0/0:9,0:8:10.28:0,10,37	0/0:6,0:5:2.96:0,3,19	0/1:13,0:12:99:131,0,108	0/0:6,0:5:5.96:0,6,66	0/1:10,0:4:19.12:19,0,77	0/0:7,0:5:3.90:0,4,50	1/1:17,0:12:3.06:44,3,0	./.	./.	0/0:3,0:3:0.94:0,1,2	./.	0/0:9,0:9:9.91:0,10,81	1/1:7,0:4:5.97:46,6,0	1/1:5,0:4:8.93:87,9,0
chr10	17650489	.	AGCCTGCCT	A	3763.42	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=8.951;DP=475;FS=29.315;HRun=0;HaplotypeScore=115.3935;InbreedingCoeff=0.8171;MQ=65.28;MQ0=2;MQRankSum=-5.775;QD=17.75;ReadPosRankSum=2.215;VQSLOD=1.3696;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:36.78:0,37,955	1/1:1,7:8:6.02:143,6,0	0/0:16,0:12:3.01:0,3,94	0/0:21,0:17:3.13:0,3,317	1/1:6,2:8:12.03:236,12,0	1/1:4,0:14:3.01:54,3,0	1/1:33,0:33:49.80:438,50,0	0/0:18,0:18:8.02:0,8,75	0/0:25,0:25:54.19:0,54,1549	1/1:12,1:13:18.06:405,18,0	1/1:3,1:4:6.02:120,6,0	0/0:18,0:18:42.14:0,42,1288	0/0:19,0:19:36.05:0,36,872	0/0:19,0:19:36.10:0,36,987	1/1:16,0:16:17.96:173,18,0	1/1:19,0:19:35.24:374,35,0	1/1:4,11:15:12.04:286,12,0	1/1:23,0:23:41.75:529,42,0	0/0:19,0:19:14.96:0,15,120	0/0:9,0:8:13.32:0,13,73	0/0:9,0:24:17.93:0,18,139	0/0:9,0:9:14.98:0,15,410	0/0:6,0:6:9.03:0,9,270	0/0:32,0:32:68.95:0,69,2132	1/1:9,0:9:9:105,9,0	1/1:6,9:15:27.09:680,27,0	1/1:6,12:19:6.02:145,6,0	1/1:3,12:15:3.01:74,3,0
chr10	17650581	.	TTTCTTTCC	T	1844.57	PASS	AB=1.000;AC=27;AF=0.540;AN=50;BaseQRankSum=9.124;DP=363;FS=41.036;HRun=0;HaplotypeScore=101.4930;InbreedingCoeff=0.6943;MQ=42.38;MQ0=32;MQRankSum=-3.158;QD=11.75;ReadPosRankSum=0.061;VQSLOD=0.1890;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:30:78.22:0,78,2231	./.	./.	./.	1/1:8,0:8:14.91:110,15,0	0/1:18,0:16:55.76:56,0,219	1/1:22,0:15:14.72:103,15,0	1/1:7,0:5:13.16:89,13,0	0/0:20,0:17:38.96:0,39,791	1/1:11,0:11:20.73:175,21,0	1/1:6,0:6:10.18:67,10,0	0/0:24,0:20:57.18:0,57,1724	0/0:17,0:17:45.95:0,46,1252	0/0:20,0:18:42.14:0,42,1269	0/0:20,0:20:12.25:0,12,336	0/0:18,0:17:23.92:0,24,322	1/1:3,0:3:3:26,3,0	0/1:12,0:11:99:135,0,115	1/1:3,6:7:19.24:352,19,0	1/1:2,2:4:12.04:257,12,0	1/1:8,0:5:9.03:150,9,0	0/0:11,0:10:24.04:0,24,730	0/0:13,0:12:36.05:0,36,1212	0/0:24,0:21:48.04:0,48,1194	0/1:9,0:8:6.92:7,0,158	1/1:13,0:13:35.96:332,36,0	1/1:16,0:16:10.21:82,10,0	1/1:11,0:10:9:102,9,0
chr10	17650585	.	TTTCC	T	2601.47	PASS	AB=0.982;AC=28;AF=0.560;AN=50;BaseQRankSum=9.415;DP=366;FS=30.878;HRun=0;HaplotypeScore=76.6459;InbreedingCoeff=0.5853;MQ=42.48;MQ0=32;MQRankSum=-2.681;QD=14.95;ReadPosRankSum=0.491;VQSLOD=1.4295;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:30:75.19:0,75,1449	./.	./.	./.	1/1:1,9:10:17.79:209,18,0	0/1:16,0:15:25.07:155,0,25	1/1:18,0:15:15:182,15,0	1/1:6,0:4:4.40:25,4,0	0/0:20,0:17:32.78:0,33,469	1/1:0,12:12:30.02:420,30,0	1/1:5,2:7:10.28:119,10,0	0/0:25,0:20:54.13:0,54,1081	0/0:17,0:17:45.87:0,46,819	0/0:20,0:18:42.08:0,42,841	0/1:20,0:20:18.06:18,0,255	0/0:19,0:18:22.85:0,23,286	1/1:3,0:3:3.01:50,3,0	0/1:12,1:12:96.12:282,0,96	1/1:8,0:6:17.99:226,18,0	1/1:5,0:4:12.03:145,12,0	1/1:7,0:4:8.89:89,9,0	0/0:13,0:12:24:0,24,455	0/0:13,0:12:35.72:0,36,793	0/0:25,0:21:42.10:0,42,702	0/1:9,0:8:42.24:42,0,96	1/1:12,1:13:36.05:557,36,0	1/1:0,16:16:12.03:158,12,0	1/1:2,9:10:6.49:116,6,0
chr10	17650589	.	C	CTCCT	3662.57	PASS	AC=34;AF=0.680;AN=50;BaseQRankSum=9.443;DP=360;FS=20.144;HRun=0;HaplotypeScore=72.1581;InbreedingCoeff=0.8545;MQ=42.23;MQ0=37;MQRankSum=-3.244;QD=18.50;ReadPosRankSum=-2.678;VQSLOD=0.9280;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:28:60.08:0,60,917	./.	./.	./.	1/1:10,0:10:18.06:231,18,0	1/1:17,0:16:26.16:276,26,0	1/1:16,0:13:12.04:203,12,0	1/1:8,0:5:5.98:69,6,0	0/0:16,0:14:21.07:0,21,360	1/1:13,0:13:30.09:503,30,0	1/1:8,0:8:9.03:111,9,0	0/0:23,0:18:36.01:0,36,511	0/0:17,0:17:30.99:0,31,504	0/0:19,0:17:33.11:0,33,566	1/1:6,14:20:12.04:272,12,0	1/1:8,12:18:6.02:135,6,0	1/1:5,0:3:3.01:49,3,0	1/1:14,0:12:24.05:390,24,0	1/1:8,0:6:18.01:291,18,0	1/1:6,0:4:12.04:166,12,0	1/1:5,0:4:8.89:85,9,0	0/0:12,0:11:20.90:0,21,282	0/0:12,0:12:33:0,33,476	0/0:23,0:19:27.08:0,27,436	1/1:7,0:6:6.02:124,6,0	1/1:14,0:13:36.07:604,36,0	1/1:17,0:17:11.81:113,12,0	1/1:10,0:10:5.93:39,6,0
chr10	17650616	.	TTCCTTCCTTCCTTTCTTTCC	T	714.53	PASS	AC=20;AF=0.500;AN=40;BaseQRankSum=-2.240;DP=347;FS=0.000;HRun=0;HaplotypeScore=121.9548;InbreedingCoeff=0.4448;MQ=37.94;MQ0=78;MQRankSum=-0.332;QD=5.95;ReadPosRankSum=2.198;VQSLOD=2.2184;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:24:3.01:0,3,97	1/1:1,0:1:3.01:103,3,0	./.	./.	1/1:11,0:11:3.01:75,3,0	./.	1/1:19,0:14:3.01:35,3,0	1/1:17,0:7:1.55:4,2,0	0/0:15,0:13:3.01:0,3,56	1/1:15,0:15:12.04:207,12,0	./.	0/0:16,0:11:9.03:0,9,209	0/0:12,0:12:3.01:0,3,98	0/0:20,0:16:6.02:0,6,75	1/1:12,0:11:3.01:78,3,0	./.	./.	./.	0/0:12,0:8:3:0,3,27	0/0:6,0:4:3.01:0,3,51	0/0:12,0:5:3.01:0,3,61	0/0:11,0:10:6.02:0,6,133	0/0:9,0:9:6.02:0,6,173	./.	1/1:5,0:4:3.01:58,3,0	1/1:15,0:14:9:141,9,0	1/1:17,0:16:3.01:41,3,0	1/1:8,0:7:3.01:104,3,0
chr10	17650672	.	TTTCC	T	142.39	PASS	AB=0.905;AC=8;AF=0.160;AN=50;BaseQRankSum=4.021;DP=325;FS=0.000;HRun=0;HaplotypeScore=41.5949;InbreedingCoeff=0.0510;MQ=23.10;MQ0=138;MQRankSum=-2.034;QD=1.98;ReadPosRankSum=-0.088;VQSLOD=1.1452;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:18,0:9:8.40:8,0,111	0/0:3,0:3:8.90:0,9,155	./.	./.	0/1:7,1:8:41.57:42,0,301	0/0:10,0:9:3.01:0,3,37	0/0:17,0:5:1.87:0,2,81	0/0:17,0:3:9.03:0,9,157	0/0:14,0:10:9.03:0,9,222	0/1:9,1:9:31.42:31,0,335	1/1:9,2:10:1.25:56,1,0	0/0:9,0:8:18.53:0,19,473	0/0:9,0:7:7.27:0,7,170	0/0:15,0:12:9.02:0,9,100	0/0:8,0:5:2.96:0,3,19	0/0:10,0:6:6.02:0,6,159	./.	1/1:11,0:6:3:27,3,0	0/0:18,0:4:6.01:0,6,71	0/0:8,0:6:18.06:0,18,399	0/0:21,0:1:3.01:0,3,33	0/0:13,0:11:18.06:0,18,424	0/0:7,0:5:6.02:0,6,166	0/0:17,0:4:11.97:0,12,267	0/0:8,0:5:2.92:0,3,17	0/1:11,3:10:95.53:96,0,289	0/0:8,0:7:14.97:0,15,321	0/0:10,0:8:14.90:0,15,242
chr10	17650748	.	CTCCTTCCT	C	2943.07	PASS	AB=0.700;AC=29;AF=0.725;AN=40;BaseQRankSum=-2.881;DP=201;FS=64.330;HRun=0;HaplotypeScore=46.0490;InbreedingCoeff=0.0495;MQ=24.35;MQ0=57;MQRankSum=-1.142;QD=22.30;ReadPosRankSum=1.021;VQSLOD=-0.2075;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,1:5:3.83:20,4,0	0/1:5,4:9:9.62:213,0,10	./.	./.	0/1:3,3:6:55.18:155,0,55	1/1:4,6:7:9.03:230,9,0	./.	./.	0/0:2,0:2:2.99:0,3,24	0/1:4,3:6:33.81:240,0,34	0/1:7,2:9:47.72:66,0,48	1/1:3,5:4:9.03:226,9,0	1/1:3,5:8:12.04:307,12,0	1/1:3,5:5:9.03:225,9,0	1/1:3,3:4:3.01:77,3,0	1/1:1,4:5:3.01:77,3,0	./.	0/0:8,0:4:2.98:0,3,21	./.	1/1:2,6:8:9.03:230,9,0	./.	1/1:3,7:9:11.97:248,12,0	1/1:2,2:3:6.02:139,6,0	./.	1/1:5,9:12:15.05:383,15,0	0/0:5,0:2:3:0,3,26	0/1:2,3:5:28.14:216,0,28	1/1:6,0:4:2.94:18,3,0
chr10	17650800	.	TC	T	592.55	PASS	AC=24;AF=1.000;AN=24;DP=54;FS=0.000;HRun=4;HaplotypeScore=25.7631;InbreedingCoeff=-0.1471;MQ=25.74;MQ0=3;QD=14.81;VQSLOD=1.6077;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	1/1:2,3:5:12:125,12,0	./.	./.	1/1:0,3:3:8.92:74,9,0	1/1:1,2:2:3.01:36,3,0	./.	./.	./.	1/1:2,2:3:3.01:36,3,0	./.	1/1:0,2:1:3.01:33,3,0	1/1:1,1:2:3.01:36,3,0	./.	./.	1/1:0,1:1:3.01:36,3,0	./.	./.	./.	1/1:5,2:6:3.01:36,3,0	./.	1/1:3,2:5:5.98:53,6,0	1/1:0,1:1:3.01:36,3,0	./.	1/1:1,5:6:12.03:134,12,0	./.	1/1:0,1:1:3.01:30,3,0	./.
chr10	17651060	.	CTCCTTCCT	C	5364.09	PASS	AB=0.650;AC=46;AF=0.885;AN=52;BaseQRankSum=-4.787;DP=361;FS=3.638;HRun=0;HaplotypeScore=57.4796;InbreedingCoeff=0.2341;MQ=35.26;MQ0=55;MQRankSum=-3.240;QD=16.21;ReadPosRankSum=0.969;VQSLOD=2.9176;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:13:8.99:97,9,0	0/0:2,0:2:2.96:0,3,19	./.	./.	1/1:6,11:17:12:213,12,0	1/1:4,12:14:18.06:451,18,0	1/1:5,17:16:12.04:304,12,0	1/1:10,0:3:3:26,3,0	0/0:8,0:19:17.99:0,18,153	0/1:9,4:10:11.25:454,0,11	1/1:6,7:13:12.04:298,12,0	1/1:4,7:10:5.67:153,6,0	1/1:3,9:11:12.04:307,12,0	1/1:2,7:9:15.05:381,15,0	1/1:4,15:19:12.04:304,12,0	1/1:4,7:10:3.01:77,3,0	1/1:5,14:15:12.04:307,12,0	1/1:7,0:4:5.89:80,6,0	1/1:11,2:4:6.02:153,6,0	1/1:4,8:11:9.50:228,10,0	1/1:5,8:9:3.01:77,3,0	1/1:5,10:15:8.92:228,9,0	1/1:4,14:17:21.03:480,21,0	1/1:11,20:27:3.01:73,3,0	0/1:2,13:15:20.79:292,0,21	1/1:3,1:3:3.01:77,3,0	1/1:6,3:9:6.02:153,6,0	1/1:3,5:6:6.02:153,6,0
chr10	17651549	.	GAC	G	104.52	PASS	AB=0.946;AC=5;AF=0.089;AN=56;BaseQRankSum=-0.694;DP=574;FS=8.521;HRun=0;HaplotypeScore=94.8820;InbreedingCoeff=-0.1095;MQ=47.79;MQ0=42;MQRankSum=-3.820;QD=1.05;ReadPosRankSum=-3.095;VQSLOD=0.3565;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:37:57.17:0,57,879	0/0:4,0:4:9.03:0,9,141	0/0:4,0:2:6.01:0,6,68	0/0:6,0:3:5.92:0,6,40	0/0:12,0:11:18.01:0,18,218	0/0:15,0:13:17.39:0,17,416	0/0:41,0:39:80.89:0,81,1137	0/1:26,0:25:99:133,0,430	0/0:21,0:17:44.97:0,45,638	0/0:19,0:16:38.70:0,39,383	0/0:16,0:15:27.08:0,27,375	0/1:19,0:17:6.76:7,0,229	0/0:21,0:18:20.22:0,20,437	0/0:14,0:11:3.21:0,3,222	0/0:32,0:30:52.31:0,52,715	0/0:22,0:22:44.86:0,45,601	0/0:28,0:28:47.72:0,48,920	0/0:21,0:16:32.43:0,32,455	0/1:18,0:13:46.69:47,0,237	0/1:12,7:19:21.47:21,0,306	0/0:41,0:35:26.75:0,27,578	0/0:17,0:13:21.07:0,21,341	0/0:9,0:8:6.02:0,6,99	0/0:43,0:40:63.52:0,64,1204	0/1:18,0:17:1.08:1,0,113	0/0:18,0:18:37.07:0,37,543	0/0:22,0:21:52.58:0,53,564	0/0:8,0:7:12.49:0,12,65
chr10	17651551	.	CAG	C	403.78	PASS	AB=0.947;AC=11;AF=0.204;AN=54;BaseQRankSum=0.206;DP=589;FS=0.568;HRun=0;HaplotypeScore=96.5414;InbreedingCoeff=-0.0876;MQ=47.68;MQ0=44;MQRankSum=-2.087;QD=2.23;ReadPosRankSum=-5.019;VQSLOD=-0.5114;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:39:31.79:0,32,452	0/0:4,0:4:8.99:0,9,74	0/0:1,0:1:2.97:0,3,20	./.	0/1:13,0:12:9.53:10,0,82	0/0:15,0:13:7.90:0,8,206	0/0:40,0:38:71.62:0,72,635	0/0:28,0:27:38.59:0,39,276	0/0:20,0:16:41.45:0,41,363	0/1:22,0:17:54.60:55,0,99	0/0:18,0:16:26.23:0,26,188	0/1:19,2:19:85.33:85,0,104	0/1:16,6:19:13.01:13,0,165	0/1:11,3:11:67.91:68,0,82	0/0:31,0:29:44.58:0,45,341	0/0:22,0:22:34.78:0,35,338	0/0:28,0:28:19.63:0,20,414	0/0:22,0:17:13.96:0,14,273	0/0:18,0:13:6.69:0,7,117	0/1:19,0:19:12.58:13,0,146	0/0:43,0:37:50.38:0,50,425	0/0:17,1:14:20.97:0,21,174	0/0:5,5:9:5.99:0,6,50	0/0:34,9:40:39.14:0,39,617	0/1:18,0:17:66.01:137,0,66	0/1:21,0:21:98.17:98,0,218	0/1:22,0:21:31.95:32,0,159	1/1:9,0:8:7.82:38,8,0
chr10	17651553	.	GACAC	G	677	PASS	AB=1.000;AC=14;AF=0.269;AN=52;BaseQRankSum=-4.983;DP=607;FS=9.378;HRun=0;HaplotypeScore=119.8480;InbreedingCoeff=0.6165;MQ=47.17;MQ0=44;MQRankSum=2.820;QD=3.19;ReadPosRankSum=2.224;VQSLOD=1.8469;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:44:18:0,18,213	0/0:4,0:4:2.99:0,3,24	./.	./.	0/0:13,0:12:5.99:0,6,49	1/1:13,0:13:5.74:36,6,0	1/1:39,0:37:23.42:169,23,0	0/0:28,0:27:5.85:0,6,34	1/1:20,0:16:17.98:168,18,0	0/0:24,0:19:30.93:0,31,222	0/1:19,0:17:0:0,0,0	0/0:20,0:21:23.48:0,23,205	0/0:21,0:18:6.30:0,6,38	0/0:11,0:10:11.98:0,12,123	1/1:19,10:27:6.49:94,6,0	1/1:22,0:22:24.19:215,24,0	0/0:28,0:28:24.97:0,25,209	1/1:21,0:17:18.91:139,19,0	0/0:19,0:16:7:0,7,34	0/0:19,0:19:2.99:0,3,24	0/1:46,0:40:20.06:20,0,59	0/0:16,0:17:2.98:0,3,21	0/0:11,0:10:0:0,0,0	0/0:42,0:40:9.47:0,9,117	0/0:21,0:19:3.71:0,4,123	0/0:23,0:23:32.46:0,32,220	0/0:25,0:24:47.67:0,48,355	0/0:9,0:8:17.68:0,18,127
chr10	17654494	.	CT	C	1839.89	PASS	AB=0.857;AC=33;AF=0.589;AN=56;BaseQRankSum=9.038;DP=509;FS=7.061;HRun=14;HaplotypeScore=79.3917;InbreedingCoeff=0.5519;MQ=64.17;MQ0=8;MQRankSum=-0.982;QD=5.17;ReadPosRankSum=4.270;VQSLOD=2.3240;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:9,0:28:42.71:139,43,0	1/1:4,10:17:16.23:97,16,0	0/0:18,0:12:6.58:0,7,30	0/1:18,0:13:3.90:4,0,56	1/1:7,6:15:21.88:135,22,0	0/0:9,1:10:6.92:0,7,203	0/1:18,3:21:22.74:23,0,228	0/0:31,1:30:20.93:0,21,302	0/0:5,0:11:14.53:0,15,99	1/1:9,11:20:4.89:178,5,0	1/1:4,9:12:14.57:102,15,0	1/1:3,0:24:47.54:156,48,0	1/1:2,0:8:12.22:35,12,0	1/1:4,0:14:22.84:69,23,0	0/0:21,1:22:27.25:0,27,371	0/0:14,0:14:27.03:0,27,251	1/1:6,23:33:60.37:368,60,0	0/1:18,4:21:33.75:34,0,287	0/1:23,1:24:11.03:11,0,303	0/0:16,0:16:3.44:0,3,173	0/0:8,0:9:20.81:0,21,173	1/1:2,0:7:8.14:24,8,0	1/1:6,0:13:14.22:42,14,0	1/1:6,1:15:18.31:53,18,0	0/0:18,0:18:28.42:0,28,296	1/1:11,18:28:59.59:387,60,0	0/1:8,13:23:44.69:143,0,45	1/1:0,2:2:5.94:41,6,0
chr10	17655019	.	T	TTGG	4260.35	PASS	AB=0.586;AC=37;AF=0.661;AN=56;BaseQRankSum=9.970;DP=552;FS=19.238;HRun=0;HaplotypeScore=135.2573;InbreedingCoeff=-0.2418;MQ=82.34;MQ0=0;MQRankSum=-6.778;QD=8.44;ReadPosRankSum=8.500;VQSLOD=2.3160;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:6,0:38:28.62:176,0,29	0/1:2,0:10:16.92:17,0,46	0/0:22,0:22:63.63:0,64,930	0/0:25,0:25:65.12:0,65,926	0/1:6,0:18:40.01:40,0,66	0/1:6,0:20:12.55:346,0,13	0/1:5,0:22:18.67:446,0,19	0/1:14,0:30:85.72:370,0,86	1/1:7,0:17:30.69:229,31,0	0/1:6,0:21:47.10:103,0,47	1/1:4,0:17:1.29:69,1,0	1/1:2,0:24:25.70:148,26,0	1/1:3,0:20:2.40:89,2,0	1/1:3,0:20:32.91:127,33,0	1/1:2,0:15:7.82:299,8,0	1/1:6,0:21:2.71:365,3,0	0/1:5,0:22:10.20:78,0,10	1/1:5,1:23:14.09:328,14,0	0/1:7,0:14:62.36:189,0,62	0/1:5,0:12:4.30:161,0,4	0/1:5,0:12:45.01:46,0,45	1/1:2,0:14:11.62:67,12,0	0/1:3,0:12:17.52:35,0,18	0/1:4,0:28:45.79:102,0,46	0/1:3,0:15:26.64:88,0,27	0/1:3,0:17:39.85:107,0,40	1/1:2,0:34:15.05:171,15,0	1/1:0,0:8:17.67:65,18,0
chr10	17655026	.	G	GAAAGGT	1345.45	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.763;DP=527;FS=5.062;HRun=0;HaplotypeScore=168.1085;InbreedingCoeff=0.9678;MQ=83.05;MQ0=0;MQRankSum=-5.251;QD=79.14;ReadPosRankSum=1.441;VQSLOD=4.6986;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:79.33:0,79,917	0/0:11,0:11:23.97:0,24,264	0/0:21,0:21:57.66:0,58,1270	0/0:25,0:25:69.21:0,69,1637	0/0:16,0:16:38.93:0,39,506	0/0:17,0:16:32.35:0,32,289	0/0:21,0:21:53.10:0,53,411	0/0:27,0:27:64.89:0,65,748	1/1:8,9:17:51.18:1440,51,0	0/0:20,0:20:56.76:0,57,668	0/0:15,0:15:27.05:0,27,305	0/0:24,0:24:60.17:0,60,755	0/0:21,0:21:53.91:0,54,714	0/0:21,0:21:45.13:0,45,575	0/0:15,0:15:31.92:0,32,248	0/0:19,0:19:39.76:0,40,294	0/0:18,0:18:45.12:0,45,578	0/0:20,0:20:44.71:0,45,465	0/0:18,0:18:53.30:0,53,570	0/0:9,0:9:20.68:0,21,192	0/0:11,0:11:14.97:0,15,195	0/0:13,0:13:33.08:0,33,423	0/0:13,0:13:30.09:0,30,424	0/0:26,0:26:57.17:0,57,810	0/0:12,0:12:21.04:0,21,268	0/0:15,0:15:39.10:0,39,450	0/0:33,0:33:75.18:0,75,836	0/0:10,0:10:21.06:0,21,254
chr10	17656123	.	GCTCT	G	3769.12	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=6.177;DP=640;FS=0.943;HRun=0;HaplotypeScore=122.7885;InbreedingCoeff=0.9938;MQ=84.92;MQ0=0;MQRankSum=-2.650;QD=30.64;ReadPosRankSum=3.056;VQSLOD=3.6627;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:42:99:0,117,2870	0/0:10,0:11:32.90:0,33,748	0/0:41,0:38:59.46:0,59,1311	0/0:42,0:38:24.05:0,24,1231	0/0:21,0:23:53.91:0,54,1168	1/1:3,9:12:18.02:276,18,0	1/1:2,14:16:27.09:460,27,0	0/0:7,0:26:63.21:0,63,1144	0/0:22,0:22:57.18:0,57,1368	0/0:14,0:14:36.12:0,36,903	0/0:15,0:15:36.12:0,36,898	0/0:22,0:23:56.98:0,57,1352	0/0:14,0:14:38.92:0,39,872	0/0:22,0:23:53.96:0,54,1213	1/1:5,21:26:51.17:865,51,0	1/1:3,17:20:42.14:716,42,0	0/0:25,0:25:69.20:0,69,1618	1/1:9,28:37:72.25:1227,72,0	0/0:9,0:15:30.10:0,30,617	0/0:2,0:11:24.08:0,24,440	0/0:11,0:46:99:0,102,1712	0/0:17,0:17:33.11:0,33,805	0/0:18,0:18:51.16:0,51,1224	0/0:21,0:22:56.98:0,57,1306	1/1:4,8:12:15.01:225,15,0	0/0:30,0:31:84.06:0,84,1948	0/0:17,0:17:45.15:0,45,1128	0/0:19,0:19:42.14:0,42,998
chr10	17660096	.	TA	T	5303.75	PASS	AB=0.885;AC=29;AF=0.518;AN=56;BaseQRankSum=10.203;DP=524;FS=4.335;HRun=11;HaplotypeScore=52.2714;InbreedingCoeff=0.9078;MQ=61.50;MQ0=6;MQRankSum=3.971;QD=17.56;ReadPosRankSum=3.217;VQSLOD=5.9316;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:21:47.93:0,48,478	1/1:0,6:7:17.01:129,17,0	0/0:8,0:2:5.10:0,5,22	0/0:12,0:10:23.70:0,24,188	1/1:4,18:22:50.87:413,51,0	1/1:1,11:12:23.97:197,24,0	1/1:5,12:18:31.97:252,32,0	0/0:35,1:36:71.57:0,72,952	0/0:14,0:14:39.05:0,39,397	1/1:2,22:24:67.95:545,68,0	1/1:3,22:25:62.87:511,63,0	0/0:15,0:15:36.05:0,36,371	0/0:17,0:17:39.10:0,39,416	0/0:12,0:12:21.04:0,21,216	1/1:7,16:22:47.93:394,48,0	1/1:3,30:33:77.88:640,78,0	1/1:3,18:20:41.95:345,42,0	1/1:2,18:21:52.96:420,53,0	0/0:25,1:24:54.59:0,55,559	0/1:20,3:22:19.82:20,0,411	0/0:11,0:11:27.07:0,27,288	0/0:17,1:18:20.42:0,20,408	0/0:17,0:17:39.09:0,39,405	0/0:14,0:14:39.06:0,39,399	1/1:2,16:18:41.95:345,42,0	1/1:4,20:25:61.93:496,62,0	1/1:2,20:22:40.22:448,40,0	1/1:1,6:6:17.98:148,18,0
chr10	17664064	.	T	TC	3764.27	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-11.283;DP=579;FS=1.291;HRun=7;HaplotypeScore=67.8904;InbreedingCoeff=0.9805;MQ=88.27;MQ0=1;MQRankSum=-0.815;QD=26.32;ReadPosRankSum=1.096;VQSLOD=4.3589;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,24:31:57.17:688,57,0	0/0:12,0:12:36.06:0,36,347	0/0:36,0:29:45.70:0,46,473	0/0:28,0:23:27.75:0,28,339	0/0:21,0:21:57.03:0,57,536	0/0:18,0:18:51.05:0,51,481	0/0:26,0:26:60.04:0,60,559	0/0:31,0:31:63.01:0,63,581	0/0:19,0:19:54.06:0,54,512	0/0:18,0:18:51.04:0,51,481	0/0:15,0:15:42.06:0,42,402	1/1:1,17:18:48.15:580,48,0	1/1:1,14:15:30.09:362,30,0	1/1:0,14:14:30.09:362,30,0	0/0:18,0:18:48.05:0,48,452	0/0:22,0:22:60.07:0,60,570	0/0:33,0:33:93.12:0,93,887	0/0:17,0:17:45.07:0,45,434	0/0:13,0:13:27.03:0,27,258	0/0:18,0:18:54.08:0,54,517	0/0:14,0:14:32.99:0,33,309	1/1:2,20:22:51.97:649,52,0	1/1:2,19:21:36.11:435,36,0	1/1:2,20:22:57.17:689,57,0	0/0:30,0:30:83.89:0,84,782	0/0:22,0:22:63.10:0,63,608	0/0:20,0:20:57.09:0,57,550	0/0:2,0:2:6.01:0,6,58
chr10	17666905	.	A	AGTGT	13075.09	PASS	AB=0.676;AC=48;AF=0.857;AN=56;BaseQRankSum=-2.402;DP=783;FS=5.233;HRun=0;HaplotypeScore=173.5905;InbreedingCoeff=0.3153;MQ=65.36;MQ0=10;MQRankSum=-0.729;QD=20.37;ReadPosRankSum=2.787;VQSLOD=4.5468;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:21,20:48:47.37:974,47,0	1/1:7,2:14:14.51:196,15,0	0/0:63,0:34:31.71:0,32,333	0/0:75,0:41:20.58:0,21,283	1/1:7,10:18:18.04:434,18,0	1/1:23,0:23:9.02:121,9,0	1/1:32,0:32:17.68:236,18,0	0/1:21,0:25:27.93:253,0,28	0/1:10,12:27:20.08:559,0,20	1/1:11,8:25:36.56:549,37,0	0/1:4,5:12:39.74:136,0,40	1/1:4,13:26:49.58:871,50,0	1/1:7,14:22:9.22:1100,9,0	1/1:8,17:30:47.13:991,47,0	1/1:26,0:25:6.01:74,6,0	1/1:13,0:22:2.51:52,3,0	1/1:14,19:34:56.98:1296,57,0	1/1:19,0:17:24.05:373,24,0	1/1:22,2:26:15.04:260,15,0	1/1:8,5:15:12.04:290,12,0	0/1:18,24:48:28.70:1162,0,29	1/1:8,10:19:18.06:434,18,0	1/1:7,5:15:14.79:301,15,0	1/1:18,17:40:44.85:962,45,0	1/1:20,0:19:8.79:99,9,0	1/1:10,11:26:38.84:627,39,0	1/1:8,11:19:24.08:579,24,0	1/1:5,1:8:6.02:145,6,0
chr10	17669101	.	AC	A	9662.36	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=18.172;DP=615;FS=1.684;HRun=1;HaplotypeScore=88.1782;InbreedingCoeff=0.9999;MQ=66.74;MQ0=0;MQRankSum=-2.536;QD=34.26;ReadPosRankSum=-0.098;VQSLOD=4.6363;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,132,2107	1/1:0,11:11:33.10:409,33,0	0/0:14,0:12:34.50:0,34,433	0/0:22,0:22:52.66:0,53,712	1/1:0,20:20:54.14:653,54,0	0/0:14,0:14:42.14:0,42,670	0/0:26,0:26:78.27:0,78,1242	1/1:0,22:22:66.21:818,66,0	1/1:1,21:22:57.18:706,57,0	1/1:0,32:32:96.29:1178,96,0	1/1:0,13:13:36.11:445,36,0	0/0:24,0:24:72.25:0,72,1147	0/0:25,0:25:75.25:0,75,1179	0/0:22,0:22:66.22:0,66,1025	0/0:23,0:23:69.24:0,69,1102	0/0:19,0:19:57.18:0,57,887	1/1:1,27:28:75.24:930,75,0	0/0:17,0:17:51.17:0,51,814	1/1:4,14:18:45.03:533,45,0	1/1:1,20:21:60.15:725,60,0	1/1:0,35:35:96.30:1190,96,0	0/0:19,0:19:57.19:0,57,910	0/0:15,0:15:42.14:0,42,670	0/0:28,0:28:84.29:0,84,1339	0/0:21,0:21:63.21:0,63,1004	1/1:1,18:19:57.18:701,57,0	1/1:0,23:23:66.21:818,66,0	1/1:0,18:18:45.14:558,45,0
chr10	17670507	.	T	TTTTTA	15724.43	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-10.805;DP=440;FS=0.459;HRun=0;HaplotypeScore=66.9341;InbreedingCoeff=0.9243;MQ=71.54;MQ0=0;MQRankSum=-2.925;QD=51.73;ReadPosRankSum=0.011;VQSLOD=4.7610;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:69.18:0,69,1228	1/1:1,7:8:17.98:447,18,0	0/0:14,0:10:11.66:0,12,125	0/0:16,0:11:6.91:0,7,122	1/1:5,16:22:45.04:1075,45,0	1/1:4,15:20:42.14:1202,42,0	1/1:2,6:9:12.04:343,12,0	1/1:6,23:34:81.19:1848,81,0	1/1:16,0:16:29.99:405,30,0	1/1:2,13:16:42.13:1115,42,0	1/1:3,6:9:17.99:447,18,0	0/0:16,0:16:42.12:0,42,721	0/0:1,0:1:3.01:0,3,56	0/0:16,0:16:36.12:0,36,662	1/1:3,6:9:15.05:429,15,0	1/1:3,12:15:18.06:516,18,0	1/1:1,17:18:42.14:1201,42,0	1/1:5,17:24:39.13:1118,39,0	1/1:2,10:12:33.07:801,33,0	1/1:6,8:14:30.03:791,30,0	1/1:2,4:6:8.95:189,9,0	0/0:6,0:6:12.04:0,12,220	0/0:12,0:12:33.10:0,33,584	0/0:26,0:26:57.15:0,57,1033	1/1:7,23:31:54.19:1547,54,0	1/1:7,12:20:45.13:1221,45,0	1/1:3,9:12:15.05:429,15,0	1/1:0,9:9:21.07:601,21,0
chr10	17670519	.	TTA	T	215.75	PASS	AB=0.750;AC=1;AF=0.018;AN=56;BaseQRankSum=2.092;DP=431;FS=6.454;HRun=0;HaplotypeScore=95.2219;InbreedingCoeff=0.0434;MQ=72.27;MQ0=0;MQRankSum=-1.167;QD=14.38;ReadPosRankSum=-0.834;VQSLOD=2.9980;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:78.27:0,78,1558	0/0:7,0:7:20.96:0,21,276	0/0:13,0:10:26.68:0,27,513	0/0:16,0:11:12.07:0,12,168	0/0:21,0:21:60.17:0,60,906	0/0:18,0:18:48.13:0,48,664	0/0:8,0:8:18.02:0,18,240	0/0:35,0:35:99:0,102,1688	0/1:10,5:15:13.01:290,0,13	0/0:19,0:19:54.11:0,54,760	0/0:8,0:8:24.08:0,24,381	0/0:17,0:17:51.15:0,51,963	0/0:2,0:2:6.02:0,6,121	0/0:14,0:14:42.14:0,42,852	0/0:8,0:8:18.06:0,18,260	0/0:14,0:14:27.08:0,27,386	0/0:20,0:20:48.12:0,48,660	0/0:22,0:22:51.12:0,51,667	0/0:18,0:18:54.14:0,54,804	0/0:13,0:13:39.06:0,39,496	0/0:7,0:7:18.06:0,18,283	0/0:6,0:6:15.05:0,15,285	0/0:14,0:14:42.14:0,42,834	0/0:21,0:21:63.20:0,63,1222	0/0:29,0:29:72.07:0,72,919	0/0:21,0:21:63.16:0,63,936	0/0:9,0:9:21.04:0,21,281	0/0:10,0:10:24.08:0,24,321
chr10	17670521	.	A	ATT	360.06	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=0.924;DP=422;FS=6.099;HRun=3;HaplotypeScore=95.5973;InbreedingCoeff=0.8236;MQ=73.09;MQ0=0;MQRankSum=-1.543;QD=25.72;ReadPosRankSum=-3.016;VQSLOD=1.3385;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:78.27:0,78,1259	0/0:7,0:7:19.19:0,19,137	0/0:14,0:11:27.08:0,27,415	0/0:14,0:10:11.23:0,11,183	0/0:22,0:22:45.59:0,46,553	0/0:17,0:17:36.13:0,36,306	0/0:8,0:8:17.39:0,17,123	0/0:34,0:34:94.91:0,95,1143	1/1:8,6:14:37.66:455,38,0	0/0:19,0:19:45.78:0,46,441	0/0:8,0:8:23.55:0,24,226	0/0:16,0:16:45.15:0,45,734	0/0:2,0:2:6.02:0,6,98	0/0:14,0:14:42.14:0,42,685	0/0:8,0:8:17.50:0,17,129	0/0:14,0:14:26.51:0,27,222	0/0:21,0:21:35.82:0,36,299	0/0:20,0:20:43.99:0,44,307	0/0:19,0:19:50.65:0,51,575	0/0:12,0:12:19.70:0,20,238	0/0:7,0:7:17.89:0,18,214	0/0:5,0:5:15.05:0,15,237	0/0:15,0:15:42.14:0,42,678	0/0:22,0:22:66.20:0,66,1026	0/0:24,0:24:58.48:0,58,396	0/0:21,0:21:58.20:0,58,516	0/0:8,0:8:17.38:0,17,131	0/0:11,0:11:23.46:0,23,158
chr10	17670597	.	G	GC	3696.13	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-12.255;DP=572;FS=5.470;HRun=3;HaplotypeScore=58.7759;InbreedingCoeff=0.9975;MQ=77.66;MQ0=0;MQRankSum=-1.849;QD=36.24;ReadPosRankSum=-3.472;VQSLOD=2.7237;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,117,1402	0/0:10,0:10:24.06:0,24,276	0/0:8,0:8:23.73:0,24,245	0/0:19,0:19:39.02:0,39,400	0/0:26,0:26:72.18:0,72,847	0/0:18,0:18:51.16:0,51,612	0/0:19,0:19:54.06:0,54,589	1/1:1,25:26:72.19:937,72,0	0/0:24,0:24:69.03:0,69,787	0/0:12,0:12:27.01:0,27,306	0/0:13,0:13:36.11:0,36,429	0/0:22,0:22:63.10:0,63,712	0/0:8,0:8:24.07:0,24,285	0/0:25,0:25:66.19:0,66,779	0/0:13,0:13:33.10:0,33,395	0/0:13,0:13:30.09:0,30,360	0/0:35,0:35:99:0,99,1169	0/0:30,0:30:78.21:0,78,921	1/1:6,10:16:42.12:541,42,0	1/1:0,13:13:36.12:500,36,0	1/1:2,45:47:99:1719,123,0	0/0:14,0:14:36.11:0,36,431	0/0:21,0:21:60.16:0,60,696	0/0:29,0:29:87.26:0,87,1033	0/0:24,0:24:66.20:0,66,786	0/0:22,0:22:66.19:0,66,781	0/0:13,0:13:39.12:0,39,467	0/0:12,0:12:33.10:0,33,395
chr10	17671471	.	AGTAGTAGTAGT	A	5747.97	PASS	AB=0.756;AC=11;AF=0.220;AN=50;BaseQRankSum=7.332;DP=843;FS=14.993;HRun=0;HaplotypeScore=169.9401;InbreedingCoeff=0.4036;MQ=33.36;MQ0=156;MQRankSum=-8.181;QD=26.01;ReadPosRankSum=-0.543;VQSLOD=3.2122;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:14:36.12:0,36,1621	0/1:3,9:8:0.94:231,0,1	./.	./.	1/1:6,20:23:5.67:106,6,0	0/0:33,0:12:36.12:0,36,1612	./.	0/0:49,0:18:36.08:0,36,876	0/0:33,0:14:36.12:0,36,1893	0/1:43,23:45:99:2626,0,337	1/1:2,14:14:11.80:172,12,0	0/0:29,0:11:33.11:0,33,1619	0/0:37,0:16:45.15:0,45,2112	0/0:34,0:17:36.12:0,36,1557	0/0:39,0:17:39.13:0,39,2003	0/0:33,0:13:36.12:0,36,1888	0/1:18,2:13:99:127,0,160	0/0:28,0:11:27.09:0,27,1119	0/0:15,0:5:15.05:0,15,723	0/0:30,0:16:42.14:0,42,1900	0/0:42,0:23:48.16:0,48,2013	0/0:19,0:10:18.06:0,18,922	0/0:27,0:11:30.10:0,30,1233	0/0:26,0:14:11.52:0,12,515	0/0:34,0:20:48.16:0,48,2241	0/1:35,14:38:99:2024,0,165	1/1:6,12:12:6.02:67,6,0	0/1:10,4:7:78.19:394,0,78
chr10	17671482	.	T	TA	119.92	PASS	AB=0.969;AC=7;AF=0.135;AN=52;BaseQRankSum=3.923;DP=816;FS=40.477;HRun=0;HaplotypeScore=126.0329;InbreedingCoeff=0.0381;MQ=35.59;MQ0=135;MQRankSum=0.169;QD=0.62;ReadPosRankSum=-3.416;VQSLOD=-0.1569;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:18:41.49:0,41,585	0/0:11,0:8:11.27:0,11,75	./.	./.	0/0:23,0:21:1.71:0,2,6	0/0:31,0:15:42.14:0,42,587	1/1:19,0:2:0.47:1,0,0	0/0:43,0:13:36.11:0,36,487	0/0:31,0:16:41.90:0,42,586	0/1:64,0:48:60.07:60,0,664	0/0:15,0:14:8.02:0,8,56	0/0:32,0:14:39.12:0,39,529	0/0:38,0:21:60.20:0,60,837	0/0:29,0:16:39.13:0,39,544	0/0:41,0:20:51.17:0,51,712	0/0:32,0:17:45.15:0,45,629	0/1:22,0:15:8.11:8,0,119	0/1:29,1:14:11.76:12,0,384	0/0:12,0:5:15.05:0,15,210	0/0:30,0:18:54.18:0,54,754	0/0:40,0:23:54.15:0,54,733	0/0:19,0:11:27.08:0,27,360	0/0:24,0:12:33.11:0,33,461	0/0:25,1:16:13.12:0,13,207	0/0:32,0:18:54.18:0,54,755	0/1:45,2:36:88.30:88,0,457	0/0:17,0:11:2.49:0,2,6	0/1:10,1:6:31.74:61,0,32
chr10	17671590	.	T	TGTA	36567.98	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-9.238;DP=880;FS=2.569;HRun=0;HaplotypeScore=155.9123;InbreedingCoeff=0.9844;MQ=65.82;MQ0=0;MQRankSum=-8.105;QD=44.76;ReadPosRankSum=8.186;VQSLOD=6.0443;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:5,30:35:75.26:1610,75,0	1/1:5,13:18:27.09:580,27,0	0/0:36,0:35:86.14:0,86,1197	0/0:27,0:27:42.53:0,43,837	1/1:2,32:36:72.22:1504,72,0	1/1:7,31:38:69.24:1481,69,0	1/1:3,14:17:39.13:817,39,0	1/1:8,18:28:63.22:1264,63,0	1/1:5,22:28:54.19:1159,54,0	1/1:4,53:58:99:3547,172,0	1/1:3,27:30:63.22:1353,63,0	1/1:7,33:41:87.30:1865,87,0	1/1:6,32:38:63.22:1343,63,0	1/1:4,18:22:42.14:873,42,0	1/1:4,38:41:84.29:1803,84,0	1/1:2,25:28:63.22:1353,63,0	1/1:8,15:23:48.16:1023,48,0	1/1:5,19:24:12.26:623,12,0	1/1:4,15:19:48.16:984,48,0	1/1:6,28:34:54.19:1160,54,0	1/1:8,42:52:99:2187,102,0	1/1:1,29:31:60.21:1289,60,0	1/1:1,28:30:60.21:1288,60,0	1/1:4,23:27:72.23:1475,72,0	1/1:4,30:34:72.25:1547,72,0	1/1:5,44:51:99:2779,138,0	1/1:6,10:16:33.11:695,33,0	1/1:1,16:17:45.15:966,45,0
chr10	17671733	.	T	TGTG	2925.11	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=7.962;DP=859;FS=3.202;HRun=0;HaplotypeScore=150.8635;InbreedingCoeff=0.8902;MQ=63.34;MQ0=1;MQRankSum=-4.711;QD=10.34;ReadPosRankSum=-2.311;VQSLOD=3.1737;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:34,1:35:9.03:159,9,0	0/0:13,0:13:29.93:0,30,311	0/0:26,0:22:26.36:0,26,374	0/0:28,0:15:29.90:0,30,251	0/0:32,0:32:53.86:0,54,616	0/0:33,0:33:59.98:0,60,577	0/0:27,0:27:53.95:0,54,543	0/0:33,0:32:68.97:0,69,611	1/1:20,2:22:23.90:384,24,0	0/0:59,0:59:99:0,135,1436	0/0:27,0:27:50.99:0,51,564	1/1:31,1:32:27.09:439,27,0	1/1:35,0:35:71.37:706,71,0	1/1:31,0:31:11.91:186,12,0	0/0:38,0:38:99:0,99,1150	0/0:29,0:29:71.98:0,72,756	0/0:24,0:24:60.05:0,60,687	0/1:30,0:30:99:146,0,284	0/0:25,0:24:44.36:0,44,395	0/0:43,0:41:57.88:0,58,520	0/0:26,0:26:65.72:0,66,611	1/1:25,2:27:11.52:205,12,0	1/1:34,0:32:13.83:184,14,0	1/1:35,0:37:57.95:720,58,0	0/0:31,0:31:66.04:0,66,705	0/0:28,0:28:66.06:0,66,714	0/0:35,0:35:74.56:0,75,780	0/0:19,0:19:47.96:0,48,481
chr10	17671745	.	G	GGTGGTA	5031.85	PASS	AB=0.604;AC=16;AF=0.286;AN=56;BaseQRankSum=2.391;DP=827;FS=1.314;HRun=0;HaplotypeScore=183.5173;InbreedingCoeff=0.8029;MQ=59.20;MQ0=4;MQRankSum=-4.641;QD=17.00;ReadPosRankSum=-0.412;VQSLOD=4.1443;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,33:44:11.95:253,12,0	0/0:13,0:13:32.90:0,33,439	0/0:22,0:18:29.28:0,29,390	0/0:29,0:15:29.90:0,30,251	0/0:31,0:31:64.64:0,65,1026	0/0:29,0:31:74.89:0,75,822	0/0:21,0:23:56.95:0,57,724	0/0:28,0:31:83.83:0,84,725	1/1:5,18:25:26.82:627,27,0	0/0:52,0:54:99:0,152,2074	0/0:23,0:23:56.96:0,57,828	1/1:4,22:29:27.09:960,27,0	1/1:35,0:37:86.28:963,86,0	1/1:2,21:26:5.87:409,6,0	0/0:38,0:38:99:0,108,1672	0/0:25,0:26:74.98:0,75,1002	0/0:20,0:22:63.04:0,63,1021	0/1:14,0:29:25.66:26,0,315	0/0:14,0:20:42:0,42,493	0/0:20,0:36:66.35:0,66,745	0/0:13,0:24:68.75:0,69,881	1/1:5,23:31:11.24:341,11,0	0/1:7,28:38:9.22:380,0,9	1/1:28,6:34:77.71:1072,78,0	0/0:28,0:30:74.76:0,75,977	0/0:26,0:30:75.12:0,75,1043	0/0:23,0:26:74.57:0,75,1087	0/0:18,0:17:50.95:0,51,642
chr10	17672119	.	TGTAGTAGTATAGTAGTA	T	3668.74	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=12.024;DP=881;FS=1.094;HRun=0;HaplotypeScore=371.7136;InbreedingCoeff=0.9437;MQ=57.24;MQ0=4;MQRankSum=-1.973;QD=45.29;ReadPosRankSum=-4.889;VQSLOD=1.0399;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:87.30:0,87,5290	0/0:10,0:10:24.08:0,24,1575	0/0:42,0:25:51.17:0,51,1736	0/0:31,0:18:42.14:0,42,1416	0/0:33,0:33:81.24:0,81,4597	0/0:25,0:25:66.21:0,66,3681	0/0:30,0:30:63.22:0,63,3367	1/1:8,23:31:69.10:1118,69,0	0/0:45,0:45:99:0,114,6314	0/0:50,0:50:99:0,132,8247	0/0:29,0:29:75.23:0,75,4139	0/0:35,0:35:75.23:0,75,4728	0/0:25,0:25:66.23:0,66,3587	0/0:29,0:29:63.22:0,63,3065	0/0:49,0:49:99:0,117,6165	0/0:45,0:45:99:0,102,5926	0/0:24,0:25:55.60:0,56,3119	0/0:13,0:13:36.59:0,37,1920	1/1:6,19:25:57.08:1419,57,0	1/1:6,19:24:35.90:1131,36,0	0/0:6,27:33:0:0,0,0	0/0:40,0:40:99:0,117,6867	0/0:35,0:35:90.04:0,90,5544	0/0:25,0:25:60.21:0,60,4119	0/0:25,0:25:63.21:0,63,3959	0/0:42,0:42:99:0,102,6228	0/0:36,0:35:93.28:0,93,5203	0/0:16,0:16:45.12:0,45,2754
chr10	17673649	.	CCT	C	205.38	PASS	AB=0.914;AC=3;AF=0.054;AN=56;BaseQRankSum=1.883;DP=570;FS=23.528;HRun=0;HaplotypeScore=111.4469;InbreedingCoeff=-0.0642;MQ=68.48;MQ0=6;MQRankSum=-5.517;QD=2.31;ReadPosRankSum=-4.494;VQSLOD=-0.7442;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:41.58:0,42,511	0/0:8,0:8:14.93:0,15,211	0/0:28,1:15:7.52:0,8,296	0/1:19,0:13:4.35:4,0,287	0/0:13,0:13:11.93:0,12,139	0/0:37,0:37:99:0,108,1969	0/0:31,0:31:86.75:0,87,1499	0/1:28,15:42:99:267,0,1230	0/0:18,0:18:42.13:0,42,597	0/0:16,0:16:42.14:0,42,742	0/0:14,0:13:13.58:0,14,191	0/1:27,0:27:25.82:26,0,835	0/0:15,0:15:41.71:0,42,513	0/0:22,0:22:57.16:0,57,757	0/0:30,0:30:90.10:0,90,1617	0/0:21,1:22:17.48:0,17,1059	0/0:11,0:11:20.12:0,20,220	0/0:16,0:16:45.03:0,45,707	0/0:14,0:13:39.11:0,39,575	0/0:13,0:12:21.03:0,21,303	0/0:18,0:18:26.67:0,27,392	0/0:26,0:26:72.10:0,72,980	0/0:21,0:21:57.10:0,57,771	0/0:23,0:23:53.92:0,54,688	0/0:19,0:18:54.17:0,54,992	0/0:16,0:16:45.15:0,45,772	0/0:20,0:19:27.07:0,27,386	0/0:4,0:4:3.01:0,3,34
chr10	17673651	.	T	TTACACAC	1748.99	PASS	AB=0.665;AC=10;AF=0.179;AN=56;BaseQRankSum=6.647;DP=685;FS=1.625;HRun=0;HaplotypeScore=191.3879;InbreedingCoeff=-0.0536;MQ=63.71;MQ0=7;MQRankSum=-8.785;QD=8.45;ReadPosRankSum=-7.356;VQSLOD=-0.2957;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:30:14.38:0,14,366	0/1:4,0:12:48.63:49,0,105	0/0:29,0:14:35.93:0,36,410	0/0:16,0:11:29.76:0,30,333	0/0:4,0:34:6.42:0,6,78	0/0:37,0:37:99:0,108,2223	0/0:26,0:30:84.18:0,84,1650	0/1:43,0:42:99:547,0,602	0/0:6,0:22:41.94:0,42,521	0/1:5,0:34:99:415,0,122	0/0:4,0:20:12.01:0,12,155	0/1:12,0:28:26.53:27,0,603	0/0:7,0:16:38.84:0,39,401	0/0:8,0:22:53.82:0,54,548	0/0:29,0:30:90.27:0,90,1993	0/0:21,0:23:69.22:0,69,1406	0/1:5,0:15:69.14:69,0,101	0/0:17,0:18:27.89:0,28,701	0/1:12,0:19:99:338,0,293	0/0:8,0:27:21.08:0,21,241	0/0:14,1:27:21.54:0,22,273	0/0:11,0:29:70.72:0,71,717	0/0:12,0:24:46.93:0,47,524	0/0:7,0:23:52.54:0,53,497	0/0:17,0:17:46.20:0,46,1155	0/1:12,0:25:99:290,0,408	0/1:6,0:21:97.75:98,0,194	1/1:0,0:7:3.01:61,3,0
chr10	17674501	.	GA	G	12151.03	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-2.061;DP=491;FS=4.196;HRun=7;HaplotypeScore=61.9066;InbreedingCoeff=0.9695;MQ=69.98;MQ0=0;MQRankSum=-2.711;QD=25.74;ReadPosRankSum=2.324;VQSLOD=5.6325;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,31:32:84.19:856,84,0	1/1:0,13:13:33.07:337,33,0	0/0:8,0:6:12.04:0,12,151	0/0:11,0:11:16.62:0,17,251	1/1:3,23:26:63.14:642,63,0	1/1:1,21:22:57.13:582,57,0	1/1:0,15:15:39.09:398,39,0	1/1:4,22:26:63.10:632,63,0	1/1:0,9:9:27.06:276,27,0	1/1:1,21:22:63.11:629,63,0	1/1:0,15:15:39.09:397,39,0	1/1:0,13:13:39.09:398,39,0	1/1:4,8:12:21.05:214,21,0	1/1:0,14:14:42.10:429,42,0	1/1:3,23:26:60.14:612,60,0	1/1:1,17:18:39.09:398,39,0	1/1:2,22:24:63.14:643,63,0	1/1:0,16:16:42.10:429,42,0	1/1:2,10:12:30.07:306,30,0	1/1:1,22:23:63.14:639,63,0	1/1:1,7:8:18.04:184,18,0	1/1:1,21:22:57.13:582,57,0	1/1:0,16:16:41.96:428,42,0	1/1:1,9:10:27.06:275,27,0	1/1:0,23:23:63.14:643,63,0	1/1:4,21:25:60.13:612,60,0	1/1:4,16:20:32.92:337,33,0	1/1:0,10:10:27.06:275,27,0
chr10	17674603	.	C	CAAA	8032.80	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-2.107;DP=485;FS=1.725;HRun=10;HaplotypeScore=78.7602;InbreedingCoeff=0.9652;MQ=60.90;MQ0=1;MQRankSum=-8.148;QD=35.70;ReadPosRankSum=-3.352;VQSLOD=3.9545;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,102,1221	1/1:3,13:18:36.10:650,36,0	0/0:7,0:7:13.30:0,13,137	0/0:11,0:9:20.97:0,21,217	1/1:10,11:21:45.08:750,45,0	0/0:20,0:20:51.12:0,51,607	0/0:23,0:23:54.12:0,54,657	1/1:5,12:22:51.09:838,51,0	0/0:17,0:17:45.09:0,45,522	1/1:3,7:13:35.31:573,35,0	1/1:4,16:21:48.10:791,48,0	0/0:18,0:19:40.45:0,40,508	0/0:7,0:7:11.99:0,12,146	0/0:13,0:13:39.12:0,39,474	0/0:23,0:23:63.15:0,63,754	0/0:15,0:15:45.14:0,45,547	1/1:6,14:21:54.14:940,54,0	0/0:9,0:10:2.71:0,3,233	1/1:3,8:13:33.11:603,33,0	1/1:8,11:20:36.10:644,36,0	1/1:5,11:18:21.07:404,21,0	0/0:14,0:14:36.09:0,36,437	0/0:16,0:16:39.10:0,39,474	0/0:14,0:14:42.13:0,42,510	0/0:11,0:12:36.04:0,36,388	1/1:5,8:16:36.09:568,36,0	1/1:11,16:28:51.15:919,51,0	1/1:4,5:10:21.05:354,21,0
chr10	17675603	.	T	TTATATGAATA	1495.44	PASS	AB=1.000;AC=27;AF=0.500;AN=54;BaseQRankSum=7.498;DP=379;FS=4.386;HRun=0;HaplotypeScore=134.2833;InbreedingCoeff=0.7850;MQ=84.40;MQ0=0;MQRankSum=-5.650;QD=7.67;ReadPosRankSum=-2.550;VQSLOD=1.7846;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:66.18:0,66,1703	1/1:3,0:3:2.22:7,2,0	1/1:14,0:14:1.25:3,1,0	0/0:16,0:15:0.37:0,0,1	1/1:14,0:14:5.69:17,6,0	0/0:25,0:25:51.06:0,51,512	0/0:14,0:14:15:0,15,141	1/1:36,0:35:48.50:619,49,0	1/1:5,3:9:6.02:300,6,0	1/1:12,0:12:16.15:53,16,0	1/1:15,0:15:8.37:43,8,0	0/0:12,0:12:21.07:0,21,629	0/0:16,0:16:27.08:0,27,661	0/0:5,0:5:6.02:0,6,139	0/0:25,0:25:30.01:0,30,293	0/0:7,0:7:18.04:0,18,186	1/1:29,0:29:37.89:127,38,0	0/0:12,0:12:21.79:0,22,265	1/1:19,0:19:23.94:299,24,0	1/1:6,0:6:5.81:58,6,0	0/1:5,0:5:0:0,0,0	0/0:6,0:6:6.02:0,6,137	0/0:9,0:9:9:0,9,95	./.	0/0:6,0:6:12.01:0,12,117	1/1:15,0:15:24.47:81,24,0	1/1:11,0:11:14.87:49,15,0	1/1:7,0:7:9.18:31,9,0
chr10	17675843	.	A	AT	3051.01	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=3.459;DP=392;FS=4.169;HRun=6;HaplotypeScore=86.3566;InbreedingCoeff=0.9475;MQ=59.13;MQ0=1;MQRankSum=2.084;QD=15.57;ReadPosRankSum=-2.393;VQSLOD=3.2304;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:41.78:0,42,385	1/1:2,3:5:9.02:95,9,0	0/0:10,0:8:14.82:0,15,151	0/0:5,0:5:6.01:0,6,58	1/1:22,0:22:44.13:463,44,0	0/0:18,0:18:26.73:0,27,220	0/0:14,0:13:29.90:0,30,278	1/1:33,0:32:62.96:658,63,0	0/0:17,0:17:42.07:0,42,420	1/1:15,0:15:33.60:289,34,0	1/1:4,5:9:19.83:173,20,0	0/0:8,0:8:23.84:0,24,213	0/0:15,0:15:17.79:0,18,154	0/0:11,0:11:26.89:0,27,246	0/0:13,0:13:32.91:0,33,307	0/0:7,0:7:20.66:0,21,152	1/1:22,0:22:17.16:109,17,0	0/0:8,0:8:20.88:0,21,185	1/1:26,0:26:56.84:528,57,0	1/1:5,5:9:17.05:148,17,0	1/1:14,1:15:5.99:53,6,0	0/0:17,0:17:45:0,45,430	0/0:14,0:14:26.42:0,26,252	0/0:13,0:13:22.76:0,23,199	0/0:6,0:6:12.02:0,12,122	1/1:7,5:12:29.99:199,30,0	1/1:11,8:19:43.17:335,43,0	1/1:1,7:8:18.06:226,18,0
chr10	17675847	.	TTTC	T	6299.19	PASS	AB=1.000;AC=35;AF=0.625;AN=56;BaseQRankSum=2.703;DP=379;FS=5.902;HRun=0;HaplotypeScore=79.1670;InbreedingCoeff=0.1510;MQ=57.55;MQ0=1;MQRankSum=-2.961;QD=19.56;ReadPosRankSum=-2.751;VQSLOD=3.1534;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:19,0:19:9.27:9,0,103	1/1:3,2:5:14.57:165,15,0	0/0:9,0:7:14.59:0,15,182	0/0:3,0:3:6.02:0,6,87	1/1:0,20:20:48.07:683,48,0	0/1:18,0:18:26.97:27,0,127	0/1:13,0:12:18.07:18,0,50	1/1:2,27:28:65.73:878,66,0	0/0:17,0:17:16.51:0,17,155	1/1:0,14:14:39.02:575,39,0	1/1:6,3:9:24:364,24,0	0/1:10,0:10:34.16:34,0,78	0/1:14,0:14:18.01:18,0,102	0/1:12,0:12:22.29:22,0,36	0/1:13,0:13:2.93:3,0,56	0/1:7,0:7:34.24:34,0,44	1/1:1,21:22:21.07:345,21,0	0/1:8,0:8:9.68:26,0,10	1/1:2,23:25:68.96:904,69,0	1/1:5,4:8:23.91:331,24,0	1/1:2,13:15:8.02:105,8,0	0/0:17,0:17:11.90:0,12,98	0/1:14,0:14:58.15:61,0,58	0/0:11,0:11:4.43:0,4,98	0/1:6,0:6:13.26:13,0,33	1/1:6,7:13:39.02:599,39,0	1/1:14,6:20:57.05:860,57,0	1/1:7,0:7:18.06:225,18,0
chr10	17675848	.	TTC	T	2365.38	PASS	AB=1.000;AC=33;AF=0.589;AN=56;BaseQRankSum=9.988;DP=375;FS=8.529;HRun=0;HaplotypeScore=85.3263;InbreedingCoeff=0.3789;MQ=57.52;MQ0=1;MQRankSum=-3.299;QD=8.18;ReadPosRankSum=-2.201;VQSLOD=1.7817;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:12.39:0,12,170	1/1:5,0:5:13.99:78,14,0	0/0:9,0:7:14.16:0,14,190	0/0:3,0:3:6.02:0,6,90	1/1:20,0:20:44.11:249,44,0	0/1:18,0:18:5.20:5,0,159	0/1:13,0:12:2.41:2,0,94	1/1:27,1:26:58.36:324,58,0	0/0:16,0:16:24.50:0,24,233	1/1:14,0:14:37.15:227,37,0	1/1:9,0:9:23.75:161,24,0	0/1:10,0:10:20.89:21,0,111	0/1:14,0:14:7.05:7,0,127	0/1:12,0:12:7.77:8,0,72	0/0:13,0:13:14.09:0,14,118	0/1:7,0:7:12.69:13,0,59	1/1:21,1:22:20.81:143,21,0	0/1:8,0:8:11.41:11,0,37	1/1:24,0:24:64.74:384,65,0	1/1:9,0:8:23.70:158,24,0	1/1:15,0:15:7.46:45,7,0	0/0:16,0:16:26.17:0,26,191	0/1:14,0:14:38.67:39,0,90	0/0:11,0:11:12.49:0,12,140	0/1:6,0:6:10.59:11,0,42	1/1:13,0:13:38.12:252,38,0	1/1:17,3:21:55.95:372,56,0	1/1:7,0:7:14.97:51,15,0
chr10	17675862	.	CTTTCTTT	C	6276.93	PASS	AB=1.000;AC=50;AF=0.893;AN=56;BaseQRankSum=2.994;DP=411;FS=4.710;HRun=0;HaplotypeScore=112.2591;InbreedingCoeff=0.3385;MQ=45.88;MQ0=5;MQRankSum=1.057;QD=15.38;ReadPosRankSum=4.630;VQSLOD=2.9541;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,5:21:37.50:429,38,0	1/1:4,0:4:11.50:96,12,0	0/1:7,0:4:1.03:1,0,76	0/0:1,0:1:3.01:0,3,31	1/1:22,0:20:31.25:211,31,0	1/1:2,13:16:12.51:257,13,0	1/1:16,3:18:37.93:399,38,0	1/1:23,0:21:1:85,1,0	0/1:16,0:16:24.56:136,0,25	1/1:16,0:16:34.34:230,34,0	1/1:11,0:11:28.42:206,28,0	1/1:12,1:14:19.23:326,19,0	1/1:3,8:12:8.05:139,8,0	1/1:14,2:16:32.85:351,33,0	1/1:15,2:18:37.63:368,38,0	1/1:4,2:8:7.05:340,7,0	1/1:21,0:21:26.03:237,26,0	1/1:8,2:9:23.73:286,24,0	1/1:27,0:27:3.42:160,3,0	1/1:17,0:16:27.37:156,27,0	1/1:12,0:12:2.33:19,2,0	1/1:15,2:17:21.08:392,21,0	1/1:12,2:15:34.39:356,34,0	1/1:15,1:12:6.47:138,6,0	1/1:4,0:6:14.68:118,15,0	1/1:17,0:16:42.94:381,43,0	1/1:24,0:24:57.87:462,58,0	0/0:2,0:2:0:0,0,1
chr10	17675864	.	TTC	T	3593.67	PASS	AB=0.985;AC=45;AF=0.833;AN=54;BaseQRankSum=-0.749;DP=409;FS=0.000;HRun=0;HaplotypeScore=91.5697;InbreedingCoeff=0.0500;MQ=45.33;MQ0=6;MQRankSum=4.678;QD=8.81;ReadPosRankSum=3.676;VQSLOD=2.8792;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:21:14.50:247,14,0	1/1:4,0:4:5.47:26,5,0	0/1:7,0:4:6.18:6,0,23	0/0:1,0:1:3.01:0,3,30	1/1:23,0:21:20.05:100,20,0	1/1:15,0:15:3.41:111,3,0	1/1:19,0:18:29.03:250,29,0	1/1:23,0:21:13.54:90,14,0	1/1:16,0:16:33.74:268,34,0	0/1:17,0:17:5.19:69,0,5	1/1:10,1:11:11.68:66,12,0	1/1:15,0:15:29.99:216,30,0	1/1:11,0:11:9.01:89,9,0	0/1:18,0:16:7.51:198,0,8	0/1:21,0:20:7.15:219,0,7	1/1:8,0:8:16.77:147,17,0	0/1:20,0:20:1.75:23,0,2	1/1:10,0:9:23.91:204,24,0	1/1:27,0:26:10:158,10,0	1/1:17,0:16:27.77:129,28,0	1/1:11,0:11:9.66:34,10,0	1/1:16,0:16:38.53:350,39,0	1/1:16,0:15:10.65:200,11,0	1/1:16,0:12:13.10:106,13,0	0/1:6,0:6:1.81:76,0,2	0/1:15,2:16:11.59:38,0,12	1/1:21,2:23:36.20:175,36,0	./.
chr10	17675869	.	T	TC	168.30	PASS	AB=0.877;AC=11;AF=0.204;AN=54;BaseQRankSum=-1.704;DP=422;FS=8.796;HRun=0;HaplotypeScore=103.5303;InbreedingCoeff=-0.2625;MQ=43.55;MQ0=10;MQRankSum=-4.068;QD=0.96;ReadPosRankSum=2.427;VQSLOD=1.2547;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,5:28:32.15:0,32,232	0/1:5,0:5:21.25:21,0,42	0/0:6,0:4:1.20:0,1,29	./.	0/1:17,4:19:13.45:13,0,121	0/0:17,0:17:8.27:0,8,30	0/1:16,2:16:6.76:7,0,133	0/0:21,0:19:24.34:0,24,206	0/0:16,0:16:34.84:0,35,258	0/1:13,4:17:37.88:38,0,141	0/1:6,3:9:50.26:50,0,79	0/1:14,2:16:27.11:27,0,111	0/0:13,0:13:6.82:0,7,24	0/0:14,1:13:8.70:0,9,110	0/0:19,3:21:2.22:0,2,187	0/1:7,2:9:27.26:27,0,36	0/1:18,2:20:23.77:24,0,46	0/0:11,0:9:23.59:0,24,156	0/0:25,0:24:50.21:0,50,296	0/0:18,1:18:21.48:0,21,168	0/0:10,1:11:10.64:0,11,63	0/0:14,1:15:16.77:0,17,289	0/1:15,1:15:17.96:18,0,165	0/0:18,0:13:18.70:0,19,120	0/0:6,0:6:8.99:0,9,93	0/1:20,0:19:57.01:57,0,107	0/1:19,4:24:24.01:24,0,188	0/0:2,0:2:0:0,0,1
chr10	17676041	.	TGTGTCTGCC	T	928.39	PASS	AB=0.950;AC=3;AF=0.054;AN=56;BaseQRankSum=5.879;DP=567;FS=3.856;HRun=0;HaplotypeScore=152.3050;InbreedingCoeff=0.6464;MQ=90.34;MQ0=0;MQRankSum=-4.972;QD=28.13;ReadPosRankSum=0.582;VQSLOD=3.4748;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,123,5192	0/0:9,0:9:24.08:0,24,1123	0/0:14,0:14:36.11:0,36,1421	0/0:32,0:32:74.68:0,75,3037	0/0:29,0:29:87.30:0,87,4162	0/0:21,0:21:63.22:0,63,3042	0/0:23,0:23:60.21:0,60,2857	0/0:22,0:22:60.20:0,60,2622	1/1:2,12:14:32.88:998,33,0	0/0:21,0:21:60.21:0,60,2780	0/0:21,0:21:54.19:0,54,2585	0/0:14,0:14:42.14:0,42,2027	0/0:15,0:15:44.98:0,45,2043	0/0:20,0:20:57.03:0,57,2619	0/0:25,0:25:63.22:0,63,2944	0/1:18,1:19:36.55:37,0,2327	0/0:23,0:23:69.24:0,69,3184	0/0:12,0:12:33.11:0,33,1454	0/0:14,0:14:39.13:0,39,1853	0/0:24,0:24:72.25:0,72,3349	0/0:26,0:26:69.24:0,69,3153	0/0:22,0:22:63.22:0,63,3014	0/0:15,0:15:39.12:0,39,1762	0/0:17,0:17:48.16:0,48,2316	0/0:22,0:22:60.21:0,60,2808	0/0:18,0:18:54.19:0,54,2573	0/0:14,0:14:42.14:0,42,1810	0/0:18,0:18:54.19:0,54,2604
chr10	17676735	.	T	TGGCGG	13475.13	PASS	AB=0.629;AC=35;AF=0.625;AN=56;BaseQRankSum=13.406;DP=707;FS=1.389;HRun=0;HaplotypeScore=170.9103;InbreedingCoeff=0.8955;MQ=78.82;MQ0=0;MQRankSum=-7.956;QD=31.48;ReadPosRankSum=-0.846;VQSLOD=4.5730;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:47:99:0,135,2611	1/1:0,0:15:36.12:596,36,0	0/0:23,0:23:63.66:0,64,1233	0/0:24,0:24:57.64:0,58,1089	1/1:3,0:32:66.22:1096,66,0	1/1:4,7:19:15.05:376,15,0	1/1:3,7:21:27.09:698,27,0	1/1:7,0:19:35.83:324,36,0	0/0:19,0:19:48.16:0,48,774	1/1:6,0:39:90.23:1397,90,0	1/1:0,0:24:51.17:832,51,0	0/0:27,0:27:78.25:0,78,1611	0/0:22,0:22:63.21:0,63,1327	0/0:32,0:32:93.28:0,93,1882	1/1:5,6:16:14.67:416,15,0	0/1:9,7:22:22.12:595,0,22	1/1:2,0:40:93.32:1545,93,0	1/1:7,5:21:33.07:803,33,0	1/1:6,0:20:50.95:793,51,0	1/1:6,0:20:23.84:430,24,0	1/1:5,0:13:5.97:81,6,0	0/0:30,0:30:87.25:0,87,1672	0/0:20,0:20:57.19:0,57,1167	0/0:33,0:33:99:0,99,1943	1/1:18,6:28:24.04:498,24,0	1/1:7,0:46:99:1658,111,0	1/1:2,0:30:72.25:1188,72,0	1/1:0,0:3:9.03:150,9,0
chr10	17677004	.	AAC	A	777.21	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.718;DP=811;FS=1.915;HRun=0;HaplotypeScore=96.5709;InbreedingCoeff=0.9999;MQ=82.02;MQ0=0;MQRankSum=-1.378;QD=35.33;ReadPosRankSum=0.854;VQSLOD=5.4206;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:56:99:0,157,3012	0/0:12,0:12:36.12:0,36,695	0/0:22,0:22:53.93:0,54,964	0/0:24,0:24:63.16:0,63,1055	0/0:23,0:23:69.24:0,69,1310	0/0:23,0:23:69.21:0,69,1285	0/0:21,0:21:63.22:0,63,1206	0/0:33,0:33:96.32:0,96,1814	1/1:1,21:22:57.19:872,57,0	0/0:35,0:35:99:0,102,1965	0/0:37,0:37:99:0,108,2051	0/0:38,0:38:99:0,108,2076	0/0:33,0:33:99:0,99,1868	0/0:27,0:27:81.28:0,81,1552	0/0:39,0:39:99:0,114,2194	0/0:39,0:39:99:0,117,2243	0/0:25,0:25:75.23:0,75,1399	0/0:28,0:28:81.28:0,81,1536	0/0:22,0:22:57.20:0,57,1088	0/0:26,0:26:75.24:0,75,1379	0/0:41,0:41:99:0,123,2316	0/0:30,0:30:87.28:0,87,1597	0/0:22,0:22:63.17:0,63,1116	0/0:39,0:39:99:0,114,2193	0/0:29,0:29:87.30:0,87,1676	0/0:20,0:20:57.20:0,57,1101	0/0:25,0:25:75.26:0,75,1417	0/0:20,0:20:60.21:0,60,1144
chr10	17677118	.	A	AT	10729.99	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-16.411;DP=680;FS=6.022;HRun=6;HaplotypeScore=58.1018;InbreedingCoeff=0.9997;MQ=80.53;MQ0=0;MQRankSum=0.243;QD=32.91;ReadPosRankSum=3.744;VQSLOD=5.1464;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,31:36:84.27:1057,84,0	0/0:15,0:15:45.08:0,45,451	0/0:21,0:21:42.08:0,42,426	0/0:16,0:16:23.70:0,24,234	0/0:38,0:38:99:0,105,1071	1/1:1,20:21:57.18:717,57,0	1/1:2,19:21:57.18:715,57,0	0/0:30,0:30:72.12:0,72,715	0/0:18,0:18:48.10:0,48,489	0/0:27,0:27:72.14:0,72,728	0/0:14,0:14:39.09:0,39,397	1/1:3,29:32:81.26:1019,81,0	1/1:3,28:31:81.26:1019,81,0	1/1:1,17:18:51.16:642,51,0	1/1:2,31:33:81.26:1019,81,0	1/1:0,21:21:57.18:717,57,0	0/0:23,0:23:66.15:0,66,673	1/1:0,20:20:57.18:714,57,0	0/0:19,0:19:51.11:0,51,520	0/0:24,0:24:69.15:0,69,702	0/0:37,0:37:99:0,102,1033	1/1:0,20:20:60.19:755,60,0	1/1:1,27:28:72.23:906,72,0	1/1:2,24:26:66.21:830,66,0	1/1:1,18:19:51.10:621,51,0	0/0:25,0:25:72.16:0,72,735	0/0:32,0:32:93.15:0,93,926	0/0:15,0:15:45.10:0,45,459
chr10	17677543	.	CA	C	1941.86	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=3.404;DP=569;FS=10.199;HRun=2;HaplotypeScore=98.8526;InbreedingCoeff=0.9927;MQ=55.73;MQ0=2;MQRankSum=-3.818;QD=29.87;ReadPosRankSum=-1.814;VQSLOD=1.8205;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:75.11:0,75,1053	0/0:10,0:10:27.09:0,27,399	0/0:17,0:10:14.22:0,14,259	0/0:26,0:19:54.18:0,54,798	0/0:22,0:22:54.14:0,54,783	0/0:19,0:16:42.11:0,42,605	0/0:28,0:28:81.23:0,81,1183	1/1:1,8:8:21.07:273,21,0	0/0:16,0:15:33.11:0,33,477	0/0:26,0:26:75.24:0,75,1105	0/0:15,0:15:42.13:0,42,611	0/0:21,0:20:57.18:0,57,835	0/0:19,0:19:54.06:0,54,735	0/0:18,0:18:45.13:0,45,650	0/0:16,0:16:39.13:0,39,584	0/0:14,0:14:33.11:0,33,494	0/0:32,0:32:93.32:0,93,1393	0/0:25,0:25:69.19:0,69,1009	1/1:1,9:9:27.09:350,27,0	1/1:1,23:24:57.19:739,57,0	1/1:0,22:22:57.19:740,57,0	0/0:17,0:17:39.10:0,39,560	0/0:12,0:12:33.07:0,33,470	0/0:30,0:30:84.28:0,84,1259	0/0:22,0:22:57.19:0,57,846	0/0:23,0:23:66.22:0,66,989	0/0:21,0:21:60.17:0,60,872	0/0:24,0:24:72.24:0,72,1078
chr10	17677602	.	CT	C	793.86	PASS	AB=0.897;AC=13;AF=0.232;AN=56;BaseQRankSum=1.310;DP=510;FS=1.931;HRun=10;HaplotypeScore=90.2619;InbreedingCoeff=0.6138;MQ=53.64;MQ0=6;MQRankSum=-5.566;QD=6.35;ReadPosRankSum=1.694;VQSLOD=1.8817;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:12.27:0,12,270	0/0:5,0:5:12.03:0,12,131	0/1:16,1:11:15.97:16,0,154	0/0:12,0:5:14.87:0,15,146	0/0:20,1:21:25.05:0,25,491	1/1:3,9:11:23.99:205,24,0	1/1:8,5:13:24.09:228,24,0	0/0:29,0:23:41.94:0,42,432	0/0:14,0:14:14.03:0,14,126	0/0:25,0:25:60.16:0,60,656	0/0:20,0:19:39.11:0,39,431	0/0:15,0:15:34.24:0,34,330	0/0:13,1:14:1.72:0,2,227	0/1:22,1:22:8:8,0,130	0/1:8,3:11:0.72:102,0,1	1/1:8,9:17:10.08:192,10,0	0/0:35,1:35:58.50:0,58,824	1/1:9,10:17:3.64:93,4,0	0/0:11,0:7:18.03:0,18,190	0/0:24,0:24:54:0,54,536	0/0:11,0:11:30.06:0,30,322	0/0:15,0:14:32.86:0,33,317	0/0:18,0:18:32.66:0,33,347	0/0:19,0:19:39.11:0,39,432	1/1:3,9:10:0.64:113,1,0	0/0:28,0:28:63.16:0,63,687	0/0:21,1:21:17.80:0,18,426	0/0:16,0:16:35.17:0,35,348
chr10	17677616	.	C	CTT	2143.18	PASS	AB=0.783;AC=34;AF=0.607;AN=56;BaseQRankSum=5.720;DP=524;FS=5.853;HRun=12;HaplotypeScore=88.8700;InbreedingCoeff=0.6608;MQ=50.53;MQ0=11;MQRankSum=-5.751;QD=6.49;ReadPosRankSum=-0.948;VQSLOD=0.5200;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,19:29:17.91:185,18,0	0/0:4,0:5:5.70:0,6,78	0/0:11,0:7:1.44:0,1,4	0/0:9,0:5:11.27:0,11,57	0/0:18,0:21:25.41:0,25,204	1/1:9,0:18:12.02:131,12,0	1/1:9,0:12:12.31:183,12,0	0/1:14,0:17:19.41:19,0,52	1/1:5,0:13:15.49:85,15,0	0/0:21,0:24:52.74:0,53,434	0/0:17,0:19:20.76:0,21,240	1/1:5,10:15:23.67:304,24,0	1/1:7,9:17:6.02:84,6,0	1/1:6,19:25:6.02:79,6,0	1/1:12,0:13:4.30:16,4,0	1/1:15,0:16:5.66:63,6,0	0/0:29,0:32:49.32:0,49,495	1/1:23,0:20:4.25:32,4,0	0/1:9,0:8:14.10:39,0,14	1/1:15,1:25:23.75:130,24,0	1/1:5,0:9:15.94:79,16,0	1/1:5,12:16:26.85:300,27,0	1/1:10,12:25:23.03:209,23,0	1/1:8,12:22:4.31:326,4,0	1/1:11,0:12:8.99:76,9,0	0/0:31,0:32:45.57:0,46,394	0/0:18,0:17:27.05:0,27,234	0/0:17,0:15:4.93:0,5,151
chr10	17682367	.	G	GTGTGTGTGTGTGTGTA	11148.38	PASS	AB=1.000;AC=36;AF=0.643;AN=56;BaseQRankSum=10.216;DP=956;FS=1.545;HRun=0;HaplotypeScore=407.6008;InbreedingCoeff=0.8485;MQ=47.05;MQ0=30;MQRankSum=-2.474;QD=19.19;ReadPosRankSum=-6.479;VQSLOD=1.3695;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:32,0:32:29.92:288,30,0	0/1:10,0:10:8.86:9,0,747	0/0:65,0:14:18.34:0,18,407	0/0:70,0:18:33.32:0,33,579	0/0:35,0:34:96.15:0,96,3031	1/1:18,2:21:24.07:662,24,0	1/1:24,0:22:24.86:266,25,0	1/1:34,0:29:60.04:862,60,0	1/1:39,0:36:49.28:409,49,0	0/0:50,0:49:99:0,122,4151	0/0:23,0:23:51.04:0,51,1527	1/1:42,0:41:53.80:652,54,0	1/1:31,0:30:69.03:1120,69,0	1/1:42,0:41:59.97:601,60,0	1/1:45,2:47:36.41:505,36,0	1/1:49,2:51:77.88:1648,78,0	0/0:40,0:40:39.51:0,40,3235	0/1:17,0:17:63.63:818,0,64	1/1:18,0:13:33.08:1188,33,0	1/1:22,2:24:33.03:593,33,0	1/1:46,0:42:32.96:365,33,0	1/1:25,0:25:32.98:357,33,0	1/1:22,0:22:20.97:215,21,0	1/1:27,0:28:14.89:113,15,0	1/1:25,2:27:24.04:480,24,0	0/0:49,0:49:99:0,135,4125	0/0:30,0:30:61.94:0,62,2134	0/0:13,0:11:33.06:0,33,1072
chr10	17682373	.	GTA	G	1893.81	PASS	AB=0.828;AC=15;AF=0.268;AN=56;BaseQRankSum=8.940;DP=961;FS=36.927;HRun=0;HaplotypeScore=256.1696;InbreedingCoeff=-0.3809;MQ=45.28;MQ0=45;MQRankSum=-0.759;QD=3.77;ReadPosRankSum=0.951;VQSLOD=1.3585;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,4:35:2.62:0,3,236	0/0:9,0:9:26.56:0,27,438	0/0:61,0:10:26.90:0,27,412	0/0:66,0:15:27.83:0,28,500	0/0:35,0:33:86.76:0,87,1616	0/1:13,6:19:23.15:204,0,23	0/1:19,6:20:64.77:65,0,105	0/1:37,2:31:77.65:78,0,509	0/1:42,2:41:57.73:58,0,321	0/0:49,0:48:99:0,129,2285	0/0:21,1:22:44.62:0,45,785	0/1:38,4:41:99:108,0,269	0/1:32,4:35:84.83:85,0,277	0/1:41,4:44:99:124,0,252	0/1:30,19:48:63.82:64,0,339	0/1:38,16:54:99:412,0,338	0/0:42,0:42:99:0,103,1712	0/1:9,7:16:88.29:199,0,88	0/1:15,5:13:99:165,0,165	0/1:16,6:22:88.53:197,0,89	0/1:40,5:40:18.44:18,0,195	0/0:20,2:21:21.95:0,22,250	0/1:17,5:22:54.42:54,0,57	0/0:25,2:27:8.86:0,9,110	0/1:15,9:24:43.31:219,0,43	0/0:49,0:47:99:0,135,2274	0/0:28,0:28:65.22:0,65,1185	0/0:13,0:11:33.06:0,33,563
chr10	17682385	.	ACG	A	684.97	PASS	AB=0.858;AC=11;AF=0.196;AN=56;BaseQRankSum=12.590;DP=967;FS=32.273;HRun=0;HaplotypeScore=255.8331;InbreedingCoeff=-0.2607;MQ=44.30;MQ0=68;MQRankSum=-4.750;QD=1.95;ReadPosRankSum=-0.636;VQSLOD=1.4376;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:17.84:0,18,805	0/0:10,0:10:25.90:0,26,490	0/1:59,0:6:10.82:11,0,186	0/0:69,0:11:29.06:0,29,284	0/0:33,0:31:90.15:0,90,1584	0/1:14,5:19:70.01:70,0,185	0/0:19,4:17:2.07:0,2,392	0/0:41,1:33:31.40:0,31,1318	0/0:42,0:39:6.49:0,6,1036	0/0:43,0:40:99:0,117,2328	0/0:19,0:18:51.15:0,51,1017	0/1:42,1:42:39.91:40,0,793	0/1:35,0:34:69.99:70,0,833	0/1:45,3:47:30.43:30,0,1132	0/0:43,16:57:7.95:0,8,1423	0/1:36,14:50:99:137,0,1107	0/0:46,0:46:78.84:0,79,2183	0/1:8,8:16:99:247,0,286	0/1:18,5:15:99:117,0,245	0/1:15,3:18:32.89:33,0,378	0/0:44,4:40:39.08:0,39,730	0/0:25,0:24:24.15:0,24,850	0/1:19,2:20:10.76:11,0,340	0/0:27,1:28:20.99:0,21,481	0/1:11,9:20:64.92:65,0,162	0/0:50,0:47:99:0,138,2490	0/0:29,0:29:80.99:0,81,1369	0/0:15,0:13:39:0,39,666
chr10	17682399	.	GTGTA	G	439.78	PASS	AB=0.851;AC=4;AF=0.074;AN=54;BaseQRankSum=7.297;DP=1011;FS=42.101;HRun=0;HaplotypeScore=286.0222;InbreedingCoeff=-0.0659;MQ=44.75;MQ0=89;MQRankSum=-9.820;QD=3.08;ReadPosRankSum=-2.355;VQSLOD=1.2848;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:63.62:0,64,407	0/0:10,0:10:27.09:0,27,611	./.	0/0:63,0:3:2.68:0,3,11	0/0:32,0:30:81.02:0,81,1839	0/0:21,0:21:11.38:0,11,106	0/0:24,1:19:29.91:0,30,207	0/1:45,4:40:99:138,0,409	0/0:48,0:45:54.45:0,54,1693	0/0:46,0:41:99:0,105,2265	0/0:22,0:20:54.12:0,54,1207	0/0:44,0:43:17.38:0,17,316	0/0:37,0:36:7.78:0,8,358	0/0:50,0:49:60.54:0,61,475	0/0:62,0:60:90.96:0,91,597	0/0:52,0:52:64.60:0,65,513	0/0:47,0:46:99:0,114,2486	0/1:11,6:17:41.44:277,0,41	0/1:20,3:13:99:122,0,140	0/0:17,0:17:23.56:0,24,169	0/1:45,9:45:6.49:6,0,242	0/0:28,0:27:56.16:0,56,366	0/0:22,0:22:29.56:0,30,193	0/0:32,0:32:25.47:0,25,201	0/0:19,1:20:14.78:0,15,97	0/0:47,0:42:99:0,117,2708	0/0:31,0:31:84.29:0,84,2083	0/0:17,0:15:45.15:0,45,1105
chr10	17682407	.	ATG	A	9983.26	PASS	AB=0.737;AC=33;AF=0.635;AN=52;BaseQRankSum=13.633;DP=1020;FS=5.077;HRun=0;HaplotypeScore=207.1548;InbreedingCoeff=0.9065;MQ=46.04;MQ0=92;MQRankSum=0.687;QD=16.37;ReadPosRankSum=2.676;VQSLOD=4.6098;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,30:45:60.89:806,61,0	0/0:12,0:12:27.09:0,27,441	./.	./.	0/0:32,0:30:75.24:0,75,1226	1/1:11,10:21:18.06:232,18,0	1/1:5,22:21:37.64:499,38,0	1/1:14,32:38:63.56:660,64,0	0/0:49,0:47:89.90:0,90,1489	0/0:50,0:42:99:0,105,1718	0/0:23,0:21:54.18:0,54,899	1/1:19,28:46:57.95:768,58,0	1/1:15,25:39:20.89:763,21,0	1/1:13,35:48:83.96:1080,84,0	1/1:12,43:53:93.30:1197,93,0	1/1:17,30:47:11.88:885,12,0	0/0:47,4:50:54.90:0,55,1553	0/1:9,5:14:35.92:131,0,36	1/1:17,6:14:20.66:215,21,0	1/1:5,11:16:27.09:347,27,0	1/1:19,39:47:49.88:624,50,0	1/1:13,25:37:57.19:733,57,0	1/1:14,13:27:30.57:387,31,0	1/1:21,23:44:36.12:463,36,0	1/1:6,7:13:14.72:193,15,0	0/0:43,2:40:69.76:0,70,1721	0/0:32,0:32:90.31:0,90,1510	0/0:22,0:20:57.19:0,57,953
chr10	17682475	.	GTGTA	G	10965.84	PASS	AB=0.643;AC=19;AF=0.365;AN=52;BaseQRankSum=11.077;DP=1306;FS=16.699;HRun=0;HaplotypeScore=212.5913;InbreedingCoeff=0.9393;MQ=49.68;MQ0=99;MQRankSum=-1.648;QD=22.70;ReadPosRankSum=3.684;VQSLOD=2.8063;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:75,0:75:99:0,126,3070	0/0:15,0:15:36.09:0,36,819	./.	./.	0/0:33,0:33:77.61:0,78,1615	1/1:10,25:35:35.76:552,36,0	1/1:31,13:42:48.06:731,48,0	1/1:20,6:18:39.07:518,39,0	0/0:51,0:50:99:0,111,2686	0/0:56,0:54:99:0,121,3223	0/0:20,0:17:51.10:0,51,1193	0/0:66,0:65:99:0,117,2675	0/0:49,0:48:99:0,99,2211	0/0:63,0:62:99:0,108,2294	1/1:31,39:71:99:1592,105,0	1/1:13,46:58:98.84:1660,99,0	0/0:44,0:44:99:0,102,2328	1/1:7,35:42:19.07:1081,19,0	0/1:12,15:22:4.15:719,0,4	1/1:8,16:25:33.10:563,33,0	1/1:21,98:113:99:2821,163,0	0/0:45,0:44:69.07:0,69,1277	0/0:36,0:36:61.87:0,62,1359	0/0:62,0:62:99:0,102,2357	1/1:12,23:35:43.69:729,44,0	0/0:47,0:43:99:0,123,2796	0/0:33,0:32:90.19:0,90,1790	0/0:20,0:20:60.12:0,60,1319
chr10	17682481	.	GTA	G	3509.37	PASS	AB=1.000;AC=18;AF=0.346;AN=52;BaseQRankSum=19.105;DP=1292;FS=10.468;HRun=0;HaplotypeScore=199.1319;InbreedingCoeff=0.8554;MQ=49.64;MQ0=105;MQRankSum=0.202;QD=7.53;ReadPosRankSum=4.909;VQSLOD=2.1791;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:72,0:72:99:0,141,2367	0/0:15,0:15:45.12:0,45,824	./.	./.	0/0:30,0:30:83.78:0,84,1446	1/1:33,1:34:34.71:223,35,0	1/1:39,0:37:19.74:214,20,0	0/1:26,0:18:40.43:207,0,40	0/0:52,0:51:99:0,114,2058	0/0:56,0:54:99:0,132,2661	0/0:21,0:18:40.39:0,40,913	0/0:73,1:73:99:0,138,2337	0/0:51,0:50:99:0,105,1783	0/0:64,0:63:99:0,117,1969	1/1:66,1:67:46.19:559,46,0	1/1:58,0:57:11.70:470,12,0	0/0:43,0:42:87.75:0,88,1873	1/1:43,0:43:39.02:377,39,0	1/1:23,0:19:32.47:261,32,0	0/1:25,0:25:2.49:150,0,2	1/1:116,0:110:95.56:821,96,0	0/0:44,0:43:46.55:0,47,1045	0/0:36,0:37:73.96:0,74,1229	0/0:59,0:60:99:0,105,1829	1/1:34,1:35:37.13:228,37,0	0/0:48,0:43:99:0,129,2285	0/0:31,0:30:90.11:0,90,1425	0/0:22,0:22:65.90:0,66,1052
chr10	17682483	.	ATG	A	1016.44	PASS	AB=0.944;AC=13;AF=0.250;AN=52;BaseQRankSum=19.952;DP=1290;FS=14.188;HRun=0;HaplotypeScore=208.2308;InbreedingCoeff=0.2252;MQ=49.67;MQ0=106;MQRankSum=-1.394;QD=2.17;ReadPosRankSum=6.666;VQSLOD=0.9162;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:65,5:70:99:0,112,2017	0/0:15,0:15:42.14:0,42,706	./.	./.	0/0:29,0:29:71.87:0,72,1201	0/1:33,2:35:19.53:44,0,20	0/1:38,1:37:45.95:46,0,70	0/1:24,1:18:17.33:17,0,105	0/0:52,0:51:99:0,105,1762	0/0:60,0:58:99:0,144,2301	0/0:21,1:19:15.59:0,16,807	0/0:69,4:72:99:0,123,2039	0/0:49,2:50:93.32:0,93,1548	0/0:52,8:59:96.33:0,96,1591	0/1:60,5:65:19.18:132,0,19	0/1:56,3:58:47.05:154,0,47	0/0:43,1:43:66.85:0,67,1612	1/1:42,2:44:3.03:205,3,0	1/1:20,2:18:38.76:187,39,0	0/1:23,4:27:47.32:47,0,96	0/1:114,3:111:80.88:266,0,81	0/0:34,10:43:18.86:0,19,850	0/0:30,7:37:68.95:0,69,1111	0/0:58,3:61:96.29:0,96,1559	1/1:31,4:36:10.67:78,11,0	0/0:50,0:44:99:0,120,1969	0/0:27,0:26:66.19:0,66,1052	0/0:23,0:23:57.16:0,57,896
chr10	17684391	.	CACAT	C	1933.33	PASS	AB=1.000;AC=25;AF=0.446;AN=56;BaseQRankSum=5.627;DP=594;FS=4.111;HRun=0;HaplotypeScore=101.8471;InbreedingCoeff=0.3446;MQ=54.03;MQ0=21;MQRankSum=-6.586;QD=5.48;ReadPosRankSum=-1.398;VQSLOD=1.9319;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:35:50.60:0,51,396	0/1:8,0:8:1.08:1,0,224	0/0:18,0:7:10.80:0,11,100	0/1:16,0:4:1.69:2,0,36	0/0:13,0:13:32.61:0,33,506	1/1:2,18:20:15.04:238,15,0	1/1:15,4:19:32.38:344,32,0	1/1:23,0:20:50.26:336,50,0	0/0:14,0:14:36.02:0,36,636	0/0:29,0:28:80.75:0,81,1035	0/0:11,0:11:17.71:0,18,388	0/1:27,0:26:32.95:33,0,398	0/0:31,0:30:9.92:0,10,338	0/1:24,0:23:69.06:69,0,189	1/1:1,17:18:14.95:254,15,0	1/1:1,24:25:15.05:275,15,0	0/0:29,0:29:78.81:0,79,1438	1/1:4,23:24:5.81:113,6,0	0/1:18,0:16:67.31:67,0,128	1/1:5,0:5:2.61:23,3,0	0/1:30,0:28:48.94:49,0,82	0/1:21,0:20:10.89:11,0,260	0/1:21,0:21:25.78:26,0,216	0/1:32,0:32:25.71:26,0,204	1/1:1,18:19:15.05:259,15,0	0/0:27,0:26:45.11:0,45,925	0/0:19,0:19:56.08:0,56,704	0/0:14,0:14:37.94:0,38,447
chr10	17684393	.	CAT	C	1547.80	PASS	AB=0.992;AC=29;AF=0.518;AN=56;BaseQRankSum=9.971;DP=599;FS=8.217;HRun=0;HaplotypeScore=88.7503;InbreedingCoeff=0.3122;MQ=54.26;MQ0=21;MQRankSum=-4.987;QD=3.73;ReadPosRankSum=2.830;VQSLOD=1.3080;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:36,0:35:58.08:58,0,118	0/1:8,0:8:3.20:3,0,152	0/0:20,0:7:10.80:0,11,100	0/1:15,0:5:7.73:8,0,34	0/0:14,0:14:27.78:0,28,376	1/1:19,0:19:14.87:106,15,0	1/1:18,0:18:29.62:243,30,0	1/1:24,0:21:53.33:365,53,0	0/0:14,0:14:25.63:0,26,414	0/0:30,0:29:74.08:0,74,808	0/0:12,0:12:11.65:0,12,280	0/1:26,0:25:99:126,0,235	0/1:31,0:30:25.94:26,0,194	0/1:23,0:22:35.13:35,0,128	1/1:17,1:18:14.39:139,14,0	1/1:24,0:24:14.52:116,15,0	0/0:31,0:31:48.76:0,49,936	1/1:26,0:23:5.51:48,6,0	1/1:18,0:16:10.19:129,10,0	1/1:5,0:5:2.78:23,3,0	1/1:31,0:29:7.17:67,7,0	0/1:20,0:19:33.64:34,0,134	0/1:21,1:22:24.86:25,0,184	0/1:31,1:32:86.03:86,0,96	1/1:19,0:19:14.83:107,15,0	0/0:24,4:27:20.98:0,21,700	0/0:21,0:21:62.03:0,62,614	0/0:14,0:14:24.22:0,24,303
chr10	17684411	.	C	CTA	3885.79	PASS	AB=0.591;AC=18;AF=0.321;AN=56;BaseQRankSum=1.312;DP=636;FS=0.868;HRun=0;HaplotypeScore=103.9023;InbreedingCoeff=0.8441;MQ=62.21;MQ0=16;MQRankSum=-1.499;QD=18.33;ReadPosRankSum=-4.457;VQSLOD=2.7597;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:32:66.22:0,66,1036	0/0:10,0:10:30.06:0,30,420	0/0:26,0:12:21.12:0,21,453	0/0:25,0:13:36.12:0,36,528	0/0:15,0:15:40.02:0,40,627	1/1:20,0:20:30.07:392,30,0	1/1:19,0:19:41.91:651,42,0	1/1:8,15:23:37.03:622,37,0	0/0:17,0:17:42.14:0,42,671	0/0:33,0:32:93.32:0,93,1492	0/0:14,0:14:33.11:0,33,516	0/0:26,0:25:68.71:0,69,1035	0/0:33,0:32:63.85:0,64,913	0/0:24,0:23:53.70:0,54,800	1/1:19,1:20:19.43:266,19,0	1/1:22,0:22:26.45:251,26,0	0/0:32,0:32:90.19:0,90,1343	1/1:22,0:20:17.78:255,18,0	0/1:9,16:26:32.01:781,0,32	1/1:8,1:9:15.05:239,15,0	0/1:9,23:32:6.37:6,0,51	0/0:24,0:23:27.38:0,27,700	0/0:20,0:20:45.05:0,45,704	0/0:29,0:29:48.63:0,49,752	1/1:17,0:17:22.60:421,23,0	0/0:28,0:27:75.25:0,75,1183	0/0:21,0:21:60.20:0,60,964	0/0:14,0:14:39.08:0,39,594
chr10	17684717	.	ATCCT	A	9459.79	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=15.479;DP=776;FS=6.848;HRun=0;HaplotypeScore=149.4260;InbreedingCoeff=0.9999;MQ=84.96;MQ0=0;MQRankSum=-4.423;QD=47.54;ReadPosRankSum=4.573;VQSLOD=5.4307;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,43:46:99:2153,108,0	0/0:18,0:18:54.19:0,54,1511	0/0:24,0:24:69.24:0,69,1820	0/0:26,0:26:71.48:0,71,1781	0/0:19,0:19:57.20:0,57,1563	0/0:17,0:17:51.17:0,51,1375	0/0:37,0:37:99:0,111,2967	0/0:25,0:25:75.26:0,75,2096	0/0:34,0:34:99:0,102,2805	0/0:30,0:30:90.31:0,90,2518	0/0:13,0:13:39.13:0,39,1057	1/1:0,22:22:63.22:1257,63,0	1/1:0,26:26:78.27:1557,78,0	1/1:1,34:35:75.19:1495,75,0	0/0:32,0:32:93.31:0,93,2531	0/0:27,0:27:81.28:0,81,2256	0/0:34,0:34:96.31:0,96,2625	0/0:40,0:40:99:0,117,3261	0/0:27,0:27:75.71:0,76,1984	0/0:16,0:16:42.14:0,42,1173	0/0:68,0:68:99:0,202,5554	1/1:0,21:19:36.59:719,37,0	1/1:1,15:16:34:661,34,0	1/1:1,32:33:81.26:1618,81,0	0/0:23,0:23:69.24:0,69,1901	0/0:29,0:29:84.29:0,84,2339	0/0:22,0:22:66.23:0,66,1845	0/0:16,0:16:48.16:0,48,1220
chr10	17685035	.	CTGTG	C	1444.14	PASS	AB=0.864;AC=12;AF=0.222;AN=54;BaseQRankSum=4.967;DP=735;FS=3.324;HRun=0;HaplotypeScore=144.6237;InbreedingCoeff=0.5834;MQ=66.45;MQ0=16;MQRankSum=2.132;QD=7.48;ReadPosRankSum=3.299;VQSLOD=2.7064;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:21:3:0,3,54	0/1:22,0:22:11.36:11,0,505	0/0:45,0:27:1.82:0,2,5	./.	0/0:23,0:26:29.84:0,30,632	1/1:15,8:23:11.89:188,12,0	1/1:24,8:33:20.28:289,20,0	0/0:25,0:25:27.09:0,27,510	0/0:22,0:22:45.15:0,45,1011	0/0:42,0:42:63.19:0,63,1234	0/0:22,0:22:27.09:0,27,612	0/0:26,0:25:2.51:0,3,55	0/0:15,0:14:8.86:0,9,149	0/0:18,0:18:5.98:0,6,112	1/1:21,8:29:24.06:352,24,0	1/1:20,14:34:30.10:472,30,0	0/0:39,0:46:74.68:0,75,1379	0/1:15,1:24:18.30:18,0,91	0/0:23,0:21:12.93:0,13,245	0/0:13,0:13:2.72:0,3,47	0/0:34,0:30:8.68:0,9,131	0/0:28,0:26:18.06:0,18,318	0/0:15,0:15:6.02:0,6,107	0/0:22,0:22:2.86:0,3,20	1/1:20,8:28:18.04:282,18,0	0/0:25,0:26:33.11:0,33,742	0/0:20,0:21:32.85:0,33,641	0/0:12,0:11:18.27:0,18,369
chr10	17685129	.	CAG	C	1637.21	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=12.802;DP=562;FS=3.818;HRun=0;HaplotypeScore=125.4626;InbreedingCoeff=0.9825;MQ=89.34;MQ0=0;MQRankSum=-12.278;QD=22.43;ReadPosRankSum=5.014;VQSLOD=4.1955;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,10:11:22.87:225,23,0	0/0:15,0:15:45.15:0,45,908	0/0:31,0:31:93.32:0,93,1798	0/0:22,0:22:60.21:0,60,1176	0/0:22,0:22:62.89:0,63,1267	0/0:22,0:22:60.21:0,60,1219	0/0:26,0:26:75.26:0,75,1511	0/0:27,0:27:81.27:0,81,1594	0/0:20,0:20:60.21:0,60,1171	0/0:34,0:34:99:0,102,2045	0/0:25,0:25:75.26:0,75,1513	1/1:0,14:13:38.93:390,39,0	1/1:0,3:3:9.02:94,9,0	1/1:0,15:15:45.08:456,45,0	0/0:19,0:19:57.20:0,57,1143	0/0:20,0:20:57.20:0,57,1158	0/0:29,0:29:84.29:0,84,1669	0/0:15,0:15:45.07:0,45,830	0/0:17,0:17:51.17:0,51,1018	0/0:27,0:27:81.26:0,81,1597	0/0:30,0:30:90.31:0,90,1826	1/1:0,13:15:36.97:375,37,0	1/1:0,5:5:14.95:140,15,0	1/1:1,8:9:15.03:152,15,0	0/0:24,0:24:69.24:0,69,1400	0/0:23,0:23:69.24:0,69,1403	0/0:33,0:33:99:0,99,1961	0/0:8,0:8:24.08:0,24,487
chr10	17685132	.	CATAGAGAATG	C	4431.70	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=12.623;DP=580;FS=2.307;HRun=0;HaplotypeScore=213.1023;InbreedingCoeff=0.9823;MQ=89.28;MQ0=0;MQRankSum=-12.164;QD=63.31;ReadPosRankSum=5.891;VQSLOD=4.6074;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,10:10:21.07:523,21,0	0/0:16,0:16:48.16:0,48,2353	0/0:32,0:32:96.30:0,96,3809	0/0:22,0:22:66.22:0,66,2069	0/0:23,0:23:66.70:0,67,3019	0/0:24,0:24:66.23:0,66,3299	0/0:26,0:26:75.26:0,75,3724	0/0:27,0:27:81.27:0,81,3174	0/0:20,0:20:60.21:0,60,2974	0/0:36,0:36:99:0,108,5074	0/0:26,0:26:78.27:0,78,3868	1/1:0,13:13:39.13:963,39,0	1/1:0,3:3:9.03:222,9,0	1/1:0,15:15:45.15:1108,45,0	0/0:20,0:20:60.21:0,60,3054	0/0:22,0:22:63.21:0,63,2976	0/0:29,0:29:87.30:0,87,4454	0/0:15,0:15:42.14:0,42,2082	0/0:17,0:17:51.17:0,51,2044	0/0:29,0:29:84.29:0,84,4060	0/0:31,0:31:93.32:0,93,4182	1/1:2,13:15:34.35:882,34,0	1/1:1,4:5:15.05:366,15,0	1/1:0,8:8:15.05:368,15,0	0/0:25,0:25:75.25:0,75,3625	0/0:27,0:27:81.28:0,81,3818	0/0:35,0:35:99:0,105,5326	0/0:8,0:8:24.08:0,24,1193
chr10	17685143	.	CATAGAGA	C	3971.29	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=12.941;DP=594;FS=0.000;HRun=0;HaplotypeScore=181.6003;InbreedingCoeff=0.9845;MQ=86.41;MQ0=1;MQRankSum=-12.606;QD=58.40;ReadPosRankSum=6.248;VQSLOD=3.4676;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,10:9:24.08:492,24,0	0/0:15,0:15:45.15:0,45,1817	0/0:33,0:33:87.13:0,87,2706	0/0:18,0:18:52.12:0,52,1268	0/0:24,0:24:66.67:0,67,2231	0/0:24,0:24:69.24:0,69,2431	0/0:27,0:27:81.28:0,81,3046	0/0:24,0:24:60.20:0,60,2147	0/0:20,0:20:60.19:0,60,2209	0/0:34,0:34:96.33:0,96,3726	0/0:29,0:29:81.28:0,81,3068	1/1:1,12:13:39.13:840,39,0	1/1:0,3:3:9.03:195,9,0	1/1:0,15:15:45.15:974,45,0	0/0:26,0:26:78.25:0,78,2746	0/0:27,0:27:81.28:0,81,2905	0/0:32,0:32:96.29:0,96,3550	0/0:14,0:14:42.14:0,42,1678	0/0:18,0:18:54.19:0,54,1942	0/0:28,0:28:84.26:0,84,3078	0/0:34,0:34:93.32:0,93,3349	1/1:0,13:13:39.13:809,39,0	1/1:1,4:5:15.05:322,15,0	1/1:1,8:8:17.98:339,18,0	0/0:25,0:25:69.24:0,69,2787	0/0:26,0:26:78.25:0,78,2996	0/0:35,0:35:99:0,105,4222	0/0:13,0:13:39.11:0,39,1185
chr10	17685880	.	GCAGA	G	7682.39	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=14.305;DP=687;FS=7.657;HRun=0;HaplotypeScore=105.5158;InbreedingCoeff=0.9267;MQ=64.05;MQ0=1;MQRankSum=0.538;QD=25.35;ReadPosRankSum=3.702;VQSLOD=4.3349;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,23:29:33.11:577,33,0	0/0:13,0:13:30.09:0,30,707	0/0:29,0:22:33.47:0,33,713	0/0:29,0:25:50.62:0,51,837	0/0:13,0:13:33.05:0,33,625	0/1:7,0:7:7.91:8,0,309	0/0:30,0:30:78.15:0,78,1541	1/1:2,11:13:26.96:274,27,0	0/0:41,0:41:99:0,99,2054	0/0:18,0:18:51.16:0,51,1171	0/0:10,0:10:24.07:0,24,561	1/1:5,25:30:45.15:787,45,0	1/1:1,23:25:54.18:943,54,0	1/1:2,35:37:54.18:945,54,0	0/0:39,0:39:93.30:0,93,2199	0/0:23,0:23:57.13:0,57,1219	0/0:44,0:44:99:0,122,2590	0/0:24,0:24:60.14:0,60,1331	1/1:4,17:21:48:547,48,0	1/1:2,16:18:35.74:455,36,0	1/1:13,48:61:75.26:1312,75,0	1/1:1,14:15:24.08:419,24,0	1/1:1,9:10:12.04:210,12,0	1/1:4,33:37:69.24:1207,69,0	0/0:25,0:25:63.14:0,63,1272	0/0:24,0:24:66.19:0,66,1446	0/0:16,0:16:36.08:0,36,745	0/0:5,0:4:12.04:0,12,276
chr10	17687165	.	TC	T	9354.85	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=9.395;DP=601;FS=0.000;HRun=8;HaplotypeScore=75.7036;InbreedingCoeff=0.9900;MQ=84.15;MQ0=0;MQRankSum=-2.427;QD=22.54;ReadPosRankSum=1.687;VQSLOD=5.2177;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,22:25:54.08:521,54,0	0/0:11,0:11:30.09:0,30,362	0/0:18,0:17:26.66:0,27,364	0/0:28,0:28:55.43:0,55,597	0/0:19,0:19:54.14:0,54,629	1/1:3,14:17:26.11:361,26,0	1/1:8,19:27:51.07:492,51,0	1/1:9,20:29:57.03:541,57,0	1/1:2,24:26:60.09:579,60,0	0/0:21,0:21:54.13:0,54,615	0/0:13,0:13:39.10:0,39,452	1/1:1,29:30:81.13:782,81,0	1/1:3,13:16:33.05:319,33,0	1/1:2,25:27:69.10:666,69,0	1/1:2,19:21:51.08:492,51,0	1/1:0,32:32:87.14:840,87,0	0/0:26,0:26:72.17:0,72,842	1/1:4,27:31:75.11:724,75,0	1/1:5,15:20:36.06:409,36,0	1/1:2,15:17:42.07:405,42,0	1/1:1,36:37:93.15:898,93,0	1/1:1,13:14:22.22:264,22,0	1/1:3,9:12:26.99:251,27,0	1/1:2,21:23:57.09:550,57,0	1/1:0,11:11:27.04:261,27,0	0/0:15,0:15:42.11:0,42,486	0/0:31,0:31:90.27:0,90,1076	0/0:4,0:4:9.03:0,9,109
chr10	17687635	.	A	AT	6393.59	PASS	AB=0.809;AC=26;AF=0.464;AN=56;BaseQRankSum=-3.269;DP=642;FS=0.000;HRun=10;HaplotypeScore=69.1026;InbreedingCoeff=0.8575;MQ=67.78;MQ0=0;MQRankSum=-1.084;QD=19.86;ReadPosRankSum=3.144;VQSLOD=5.7417;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,40:42:93.23:992,93,0	0/0:14,0:14:26.94:0,27,218	0/0:10,0:10:15.81:0,16,105	0/1:11,0:9:33.73:34,0,39	0/0:20,0:20:50.90:0,51,416	1/1:2,20:22:32.27:493,32,0	1/1:3,19:22:48.12:512,48,0	0/0:34,0:34:71.78:0,72,576	0/0:4,0:30:46.85:0,47,135	0/0:37,0:37:99:0,102,828	0/0:6,0:6:8.98:0,9,74	1/1:5,18:23:54.14:576,54,0	1/1:5,13:18:36.09:382,36,0	1/1:7,15:22:39.10:416,39,0	1/1:8,19:27:33.08:352,33,0	1/1:7,25:32:66.16:698,66,0	0/0:29,0:30:82.92:0,83,668	1/1:3,16:19:36.09:384,36,0	0/0:19,0:19:41.88:0,42,331	0/0:18,0:19:52.37:0,52,424	0/0:34,0:34:71.83:0,72,586	1/1:4,15:19:42.11:448,42,0	0/1:8,13:21:7.20:333,0,7	1/1:5,11:16:30.08:320,30,0	1/1:6,22:28:23.48:455,23,0	0/0:35,0:35:92.88:0,93,762	0/0:14,0:14:32.93:0,33,268	0/0:17,0:17:44.95:0,45,369
chr10	17688851	.	TCCCAA	T	1309.04	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.759;DP=673;FS=0.000;HRun=0;HaplotypeScore=136.8974;InbreedingCoeff=0.9979;MQ=89.45;MQ0=1;MQRankSum=-3.052;QD=59.50;ReadPosRankSum=2.126;VQSLOD=4.1535;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,99,3093	0/0:21,0:21:63.20:0,63,1944	0/0:30,0:30:84.29:0,84,2573	0/0:23,0:23:66.23:0,66,1903	0/0:33,0:33:93.32:0,93,2982	0/0:16,0:16:48.16:0,48,1537	0/0:25,0:25:72.25:0,72,2289	0/0:30,0:30:87.30:0,87,2700	1/1:1,21:22:63.22:1404,63,0	0/0:28,0:28:81.28:0,81,2541	0/0:26,0:26:75.26:0,75,2355	0/0:22,0:22:66.23:0,66,2115	0/0:29,0:29:87.30:0,87,2772	0/0:19,0:19:57.20:0,57,1842	0/0:20,0:20:57.20:0,57,1806	0/0:16,0:16:48.16:0,48,1526	0/0:29,0:29:87.30:0,87,2742	0/0:9,0:9:24.08:0,24,776	0/0:22,0:22:66.23:0,66,2071	0/0:23,0:23:66.23:0,66,2131	0/0:25,0:24:69.24:0,69,2207	0/0:32,0:32:96.33:0,96,3067	0/0:26,0:26:78.27:0,78,2508	0/0:16,0:16:48.16:0,48,1523	0/0:32,0:32:96.33:0,96,3052	0/0:21,0:21:60.21:0,60,1904	0/0:30,0:30:87.30:0,87,2790	0/0:14,0:14:42.14:0,42,1357
chr10	17689252	.	TG	T	4770.56	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=5.352;DP=796;FS=12.699;HRun=3;HaplotypeScore=87.8958;InbreedingCoeff=0.9977;MQ=85.85;MQ0=0;MQRankSum=-2.576;QD=34.32;ReadPosRankSum=-2.237;VQSLOD=3.2355;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:87.28:0,87,1234	0/0:12,0:12:36.12:0,36,518	0/0:30,0:30:79.88:0,80,1160	0/0:28,0:28:78.26:0,78,1107	0/0:30,0:30:87.29:0,87,1250	0/0:32,0:32:93.30:0,93,1319	0/0:20,0:20:60.20:0,60,863	1/1:3,46:49:99:1612,132,0	0/0:20,0:20:57.19:0,57,818	0/0:35,0:35:96.32:0,96,1366	0/0:29,0:29:84.27:0,84,1191	0/0:18,0:18:51.17:0,51,734	0/0:27,0:27:81.27:0,81,1162	0/0:30,0:30:90.30:0,90,1295	0/0:43,0:43:99:0,126,1797	0/0:18,0:18:54.17:0,54,757	0/0:27,0:27:81.24:0,81,1141	0/0:24,0:24:63.20:0,63,907	1/1:1,15:16:43.71:555,44,0	1/1:0,22:22:60.19:744,60,0	1/1:0,52:52:99:1860,150,0	0/0:32,0:32:93.31:0,93,1332	0/0:41,0:41:99:0,114,1639	0/0:30,0:30:87.29:0,87,1251	0/0:27,0:27:78.26:0,78,1120	0/0:25,0:25:75.25:0,75,1079	0/0:40,0:40:99:0,120,1665	0/0:6,0:6:18.06:0,18,259
chr10	17690099	.	T	TA	1976.97	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=-10.020;DP=480;FS=0.473;HRun=9;HaplotypeScore=48.5666;InbreedingCoeff=0.8826;MQ=67.35;MQ0=1;MQRankSum=-0.092;QD=21.72;ReadPosRankSum=-3.612;VQSLOD=2.6519;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:62.86:0,63,535	0/0:3,0:3:6:0,6,52	0/1:8,0:8:0.29:0,0,5	0/0:7,0:6:6.56:0,7,37	0/0:27,0:27:60.04:0,60,538	0/0:26,0:26:74.90:0,75,630	0/0:6,0:6:15:0,15,130	1/1:3,24:27:72.02:726,72,0	0/0:12,0:12:32.96:0,33,270	0/0:29,0:29:80.18:0,80,676	0/0:16,0:16:41.91:0,42,355	0/0:12,0:12:32.97:0,33,283	0/0:20,0:20:56.95:0,57,486	0/0:17,0:17:44.81:0,45,375	0/0:13,0:13:14.63:0,15,284	0/0:16,0:16:41.93:0,42,349	0/0:21,0:21:59.92:0,60,509	0/0:15,0:15:35.97:0,36,308	1/1:4,15:19:23.24:407,23,0	1/1:3,24:27:66.10:705,66,0	1/1:1,9:10:27.07:298,27,0	0/0:13,0:13:32.97:0,33,280	0/0:13,0:13:35.82:0,36,297	0/0:20,0:20:53.97:0,54,464	0/0:14,0:14:38.99:0,39,338	0/0:12,0:12:32.98:0,33,283	0/0:29,0:29:59.86:0,60,499	0/0:24,0:24:65.97:0,66,572
chr10	17690499	.	TAA	T	3819.76	PASS	AC=28;AF=0.609;AN=46;BaseQRankSum=6.967;DP=210;FS=1.959;HRun=4;HaplotypeScore=32.5400;InbreedingCoeff=0.7229;MQ=62.44;MQ0=5;MQRankSum=0.131;QD=31.83;ReadPosRankSum=-1.907;VQSLOD=1.8934;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,8:10:12.04:174,12,0	./.	0/0:6,0:4:3.01:0,3,56	0/0:13,0:5:2.97:0,3,64	0/0:11,0:11:27.08:0,27,476	1/1:0,13:13:27.09:397,27,0	1/1:1,0:1:2.96:19,3,0	1/1:0,32:32:93.18:1182,93,0	1/1:0,3:2:6.02:88,6,0	0/0:5,0:5:15.05:0,15,281	0/0:6,0:6:18.03:0,18,295	1/1:1,3:4:9.03:132,9,0	1/1:0,3:3:3.01:44,3,0	1/1:0,5:5:9.03:132,9,0	./.	1/1:1,4:4:6.02:88,6,0	0/0:20,0:20:57.17:0,57,999	1/1:1,29:30:75.25:1101,75,0	1/1:2,6:8:24:305,24,0	./.	./.	1/1:0,1:1:3.01:44,3,0	1/1:2,0:2:2.99:24,3,0	./.	1/1:0,3:3:6.02:88,6,0	0/0:4,0:4:9.03:0,9,169	0/0:4,0:4:12.04:0,12,225	0/0:21,0:21:63.19:0,63,1119
chr10	17690546	.	TGGTCC	T	974.28	PASS	AC=4;AF=0.091;AN=44;BaseQRankSum=3.339;DP=179;FS=13.722;HRun=0;HaplotypeScore=49.7153;InbreedingCoeff=0.5643;MQ=70.94;MQ0=2;MQRankSum=-6.038;QD=48.71;ReadPosRankSum=-1.881;VQSLOD=2.0142;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:10:30.10:0,30,982	./.	0/0:6,0:6:18.05:0,18,475	0/0:4,0:3:6.02:0,6,180	0/0:10,0:10:30.10:0,30,971	0/0:13,0:13:27.09:0,27,899	0/0:1,0:1:3.01:0,3,100	1/1:3,8:11:30.03:568,30,0	0/0:2,0:1:3.01:0,3,100	0/0:5,0:5:15.05:0,15,500	0/0:8,0:8:21.07:0,21,697	0/0:4,0:4:9.03:0,9,300	0/0:3,0:3:6.02:0,6,199	./.	0/0:4,0:4:9.03:0,9,300	0/0:2,0:1:3.01:0,3,100	0/0:20,0:20:51.15:0,51,1620	0/0:28,0:28:65.25:0,65,2039	1/1:1,8:9:24.04:521,24,0	./.	./.	0/0:1,0:1:3.01:0,3,100	0/0:2,0:2:3.01:0,3,100	./.	./.	0/0:6,0:6:18.06:0,18,600	0/0:8,0:8:24.08:0,24,799	0/0:18,0:18:54.19:0,54,1799
chr10	17690555	.	C	CTTAT	1136.02	PASS	AC=12;AF=0.400;AN=30;BaseQRankSum=-4.649;DP=200;FS=3.614;HRun=0;HaplotypeScore=50.9031;InbreedingCoeff=0.8003;MQ=60.35;MQ0=7;MQRankSum=2.924;QD=17.75;ReadPosRankSum=1.518;VQSLOD=2.6426;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,0:10:6.02:104,6,0	./.	./.	./.	0/0:9,0:9:15.04:0,15,215	1/1:10,3:13:9.03:212,9,0	./.	0/0:24,0:21:27.21:0,27,165	./.	0/0:6,0:5:9.03:0,9,141	0/0:9,0:9:18.06:0,18,282	1/1:4,0:4:3.01:52,3,0	1/1:3,0:3:3.01:52,3,0	./.	1/1:0,4:4:9.03:212,9,0	./.	0/0:22,0:22:36.11:0,36,534	1/1:15,13:28:27.09:637,27,0	0/0:12,0:12:23:0,23,118	./.	./.	./.	./.	./.	./.	0/0:7,0:7:15.05:0,15,235	0/0:9,0:8:12.04:0,12,188	0/0:19,0:19:12.04:0,12,188
chr10	17690590	.	A	AT	1208.52	PASS	AB=1.000;AC=22;AF=0.478;AN=46;BaseQRankSum=2.277;DP=247;FS=8.790;HRun=7;HaplotypeScore=28.6746;InbreedingCoeff=0.5904;MQ=43.46;MQ0=16;MQRankSum=-3.820;QD=8.39;ReadPosRankSum=-0.423;VQSLOD=-0.3024;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:11:4.15:13,4,0	0/0:6,0:5:15.01:0,15,139	./.	./.	0/0:6,0:6:12.02:0,12,116	0/1:13,0:8:4.66:5,0,40	0/0:3,0:2:6.01:0,6,57	1/1:20,15:29:45.10:524,45,0	./.	0/0:5,0:5:15.02:0,15,145	0/0:7,0:7:21.03:0,21,203	1/1:7,0:4:1.25:3,1,0	1/1:5,0:4:2.50:9,2,0	1/1:7,0:4:8.94:65,9,0	1/1:4,0:4:6.11:17,6,0	0/0:2,0:2:3:0,3,29	0/0:28,0:22:39.03:0,39,369	0/1:28,0:27:24.47:24,0,35	1/1:4,16:16:48.15:576,48,0	./.	./.	1/1:4,0:4:8.96:68,9,0	1/1:6,0:3:5.97:45,6,0	1/1:1,0:1:2.99:23,3,0	0/0:6,0:5:3:0,3,29	0/0:11,0:9:27.04:0,27,261	0/0:11,0:9:21.03:0,21,203	0/0:10,0:9:21.03:0,21,203
chr10	17690593	.	T	TATTTA	1176.05	PASS	AB=1.000;AC=20;AF=0.435;AN=46;BaseQRankSum=2.933;DP=264;FS=1.448;HRun=0;HaplotypeScore=46.3963;InbreedingCoeff=0.4098;MQ=43.72;MQ0=18;MQRankSum=-2.080;QD=7.49;ReadPosRankSum=0.794;VQSLOD=1.5596;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:7,12:18:6.01:193,6,0	0/0:7,0:6:18.05:0,18,233	./.	./.	0/0:8,0:8:18.04:0,18,331	0/1:13,0:8:69.93:70,0,70	0/0:4,0:3:6.02:0,6,83	0/1:34,0:27:99:118,0,187	./.	0/0:5,0:5:15.05:0,15,293	0/0:8,0:8:24.04:0,24,480	1/1:3,3:6:3.01:97,3,0	1/1:1,4:4:3.01:96,3,0	1/1:3,0:4:9.03:124,9,0	1/1:4,0:4:9.01:86,9,0	0/0:2,0:2:3.01:0,3,42	0/0:27,0:21:41.84:0,42,852	0/1:28,0:27:47.43:240,0,47	0/1:22,0:18:60.35:60,0,200	./.	./.	1/1:0,0:5:9.03:126,9,0	1/1:4,0:4:6.02:84,6,0	1/1:0,0:1:3.01:42,3,0	0/0:5,0:4:4.83:0,5,47	0/0:11,0:9:27.09:0,27,512	0/0:12,0:10:23.75:0,24,431	0/0:10,0:9:21.07:0,21,405
chr10	17691490	.	CAGA	C	13509.17	PASS	AB=0.977;AC=27;AF=0.482;AN=56;BaseQRankSum=11.050;DP=726;FS=8.620;HRun=0;HaplotypeScore=123.6332;InbreedingCoeff=0.9391;MQ=80.01;MQ0=0;MQRankSum=-3.372;QD=33.69;ReadPosRankSum=6.168;VQSLOD=5.0656;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,33:35:84.15:1288,84,0	0/0:14,0:14:42.14:0,42,924	0/0:22,0:22:60.14:0,60,1079	0/0:26,0:26:57.47:0,57,1199	0/0:19,0:19:57.20:0,57,1222	1/1:0,19:19:45.15:722,45,0	1/1:4,22:26:60.20:963,60,0	0/0:36,0:36:96.31:0,96,2036	0/1:41,1:42:6.34:6,0,1344	0/0:29,0:29:75.26:0,75,1641	0/0:15,0:15:39.09:0,39,814	1/1:1,32:33:84.15:1287,84,0	1/1:3,38:41:99:1568,111,0	1/1:1,32:33:87.06:1366,87,0	1/1:2,48:50:99:1799,114,0	1/1:3,26:29:69.10:1047,69,0	0/0:27,0:27:72.25:0,72,1569	1/1:1,19:20:48.16:771,48,0	0/0:24,0:24:57.20:0,57,1244	0/0:13,0:13:39.12:0,39,802	0/0:53,0:53:99:0,135,2905	1/1:3,12:15:33.11:523,33,0	1/1:2,10:12:18.06:289,18,0	1/1:0,37:37:99:1590,99,0	1/1:1,8:9:18.06:289,18,0	0/0:19,0:19:51.14:0,51,1007	0/0:20,0:20:54.19:0,54,1192	0/0:8,0:8:21.07:0,21,449
chr10	17691581	.	C	CACACATACACATGTACACACAG	17134.46	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=-2.407;DP=1040;FS=3.043;HRun=0;HaplotypeScore=560.4357;InbreedingCoeff=0.8611;MQ=53.35;MQ0=8;MQRankSum=-11.888;QD=45.81;ReadPosRankSum=-6.658;VQSLOD=0.7405;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:64,0:64:99:0,163,8018	0/0:13,0:13:33.09:0,33,1323	0/0:44,0:24:59.55:0,60,1680	0/0:45,0:31:45.23:0,45,1514	0/0:36,0:36:99:0,102,4867	1/1:26,5:31:21.03:752,21,0	1/1:49,0:49:25.51:829,26,0	1/1:59,0:58:99:6351,132,0	0/0:55,0:55:99:0,138,6582	0/0:38,0:38:96.32:0,96,4556	0/0:16,0:16:33.10:0,33,1506	0/0:41,0:41:93.31:0,93,4338	0/0:35,0:34:93.32:0,93,4616	0/0:42,0:42:99:0,108,5278	1/1:55,6:62:23.05:666,23,0	1/1:38,6:45:36.10:1528,36,0	0/0:34,0:34:87.27:0,87,4301	0/1:18,0:18:99:988,0,314	1/1:11,17:38:99:5466,99,0	1/1:9,8:20:3.46:50,3,0	1/1:48,1:49:29.31:505,29,0	0/0:26,0:26:63.22:0,63,3136	0/0:21,0:21:45.15:0,45,2221	0/0:41,0:41:99:0,102,4891	0/0:11,17:30:0:0,0,0	0/0:40,0:40:99:0,117,5421	0/0:37,0:37:99:0,99,5223	0/0:6,0:6:18.06:0,18,774
chr10	17691631	.	AAC	A	8121.94	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=15.744;DP=982;FS=5.749;HRun=0;HaplotypeScore=232.4612;InbreedingCoeff=0.9632;MQ=54.61;MQ0=4;MQRankSum=-3.809;QD=22.31;ReadPosRankSum=-4.269;VQSLOD=3.4840;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:65,3:68:40.92:0,41,2131	0/0:9,0:9:16.23:0,16,312	0/0:45,0:24:33.11:0,33,520	0/0:55,1:40:13.96:0,14,664	0/0:30,0:29:72.20:0,72,1113	1/1:9,19:28:32.15:514,32,0	1/1:9,28:37:73.49:843,73,0	1/1:13,41:54:99:1475,120,0	0/0:45,0:45:99:0,108,1674	0/0:38,0:38:93.27:0,93,1410	0/0:16,0:16:36.12:0,36,587	0/0:33,0:33:81.28:0,81,1324	0/0:36,1:37:52.78:0,53,1373	0/0:36,1:37:49.81:0,50,1322	1/1:11,35:47:98.88:1048,99,0	1/1:12,25:37:83.82:845,84,0	0/0:37,0:37:80.49:0,80,1589	1/1:4,20:24:65.69:796,66,0	1/1:7,15:22:45.14:560,45,0	1/1:2,8:12:23.90:275,24,0	1/1:13,70:83:99:1295,105,0	0/0:17,0:17:39.13:0,39,642	0/0:15,2:17:1.61:0,2,551	0/0:44,0:45:88.23:0,88,1582	1/1:4,16:20:39.08:470,39,0	0/0:43,1:44:85.88:0,86,1901	0/0:32,0:32:81.25:0,81,1262	0/0:12,0:12:27.02:0,27,394
chr10	17692917	.	CTG	C	4028.37	PASS	AB=0.741;AC=32;AF=0.593;AN=54;BaseQRankSum=1.111;DP=615;FS=7.558;HRun=0;HaplotypeScore=109.3151;InbreedingCoeff=0.5180;MQ=67.80;MQ0=5;MQRankSum=2.986;QD=10.30;ReadPosRankSum=2.160;VQSLOD=2.8277;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:1.04:0,1,26	1/1:4,9:14:29.92:317,30,0	0/0:44,0:30:9.50:0,10,137	0/0:40,0:23:6.02:0,6,91	0/0:10,0:11:0.90:0,1,167	0/1:11,10:21:64.41:189,0,64	1/1:7,11:20:23.56:230,24,0	1/1:31,0:39:17.04:83,17,0	1/1:6,0:14:19.88:98,20,0	1/1:17,11:28:30.08:337,30,0	0/1:8,9:18:15.75:253,0,16	0/0:19,0:19:3.01:0,3,44	0/0:11,0:11:6.02:0,6,74	0/0:12,0:12:6:0,6,65	1/1:9,17:27:44.96:485,45,0	1/1:11,12:23:24.07:269,24,0	1/1:25,15:40:34.37:401,34,0	1/1:20,12:32:12.61:347,13,0	1/1:19,0:21:8.52:42,9,0	1/1:5,0:18:14.20:70,14,0	0/1:17,0:16:0:0,0,0	0/0:21,0:20:6.02:0,6,85	./.	0/0:25,0:24:2.97:0,3,26	1/1:5,9:14:21.06:235,21,0	0/1:8,10:18:14.71:274,0,15	1/1:9,8:17:24.54:270,25,0	1/1:5,3:10:14.71:129,15,0
chr10	17693128	.	AT	A	10453.75	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=18.487;DP=649;FS=1.292;HRun=2;HaplotypeScore=83.9225;InbreedingCoeff=0.9995;MQ=90.20;MQ0=0;MQRankSum=-7.875;QD=35.56;ReadPosRankSum=5.738;VQSLOD=5.0247;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,35:35:90.29:1168,90,0	0/0:9,0:9:24.08:0,24,353	0/0:27,0:26:77.64:0,78,1028	0/0:25,0:25:66.19:0,66,946	0/0:32,0:32:96.32:0,96,1421	1/1:1,29:30:81.26:1052,81,0	1/1:1,21:22:57.18:737,57,0	0/0:31,0:31:93.29:0,93,1324	0/0:21,0:21:63.19:0,63,904	0/0:27,0:27:81.26:0,81,1194	0/0:17,0:17:51.17:0,51,764	1/1:2,24:26:66.21:856,66,0	1/1:0,9:9:27.09:350,27,0	1/1:1,23:24:63.16:799,63,0	1/1:1,27:28:78.25:1013,78,0	1/1:0,16:16:48.16:623,48,0	0/0:31,0:31:93.29:0,93,1354	1/1:0,11:11:30.10:389,30,0	0/0:14,0:14:39.13:0,39,584	0/0:19,0:19:54.14:0,54,784	0/0:19,0:19:57.19:0,57,854	1/1:0,29:29:84.27:1090,84,0	1/1:0,18:18:54.18:701,54,0	1/1:1,23:24:66.21:857,66,0	1/1:0,22:22:63.20:818,63,0	0/0:32,0:32:96.30:0,96,1386	0/0:31,0:30:93.30:0,93,1374	0/0:20,0:20:60.20:0,60,899
chr10	17693776	.	G	GT	10232.14	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-6.288;DP=553;FS=4.793;HRun=2;HaplotypeScore=53.7164;InbreedingCoeff=0.9880;MQ=73.85;MQ0=0;MQRankSum=-1.935;QD=39.35;ReadPosRankSum=3.707;VQSLOD=5.3476;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,26:28:75.25:1074,75,0	0/0:6,0:6:18.06:0,18,223	0/0:13,0:13:36.07:0,36,418	0/0:8,0:8:21.03:0,21,236	0/0:32,0:32:96.30:0,96,1190	1/1:0,12:12:36.12:519,36,0	1/1:3,17:20:45.15:648,45,0	0/0:25,0:25:72.23:0,72,892	0/0:15,0:15:42.13:0,42,520	0/0:26,0:26:75.24:0,75,930	0/0:32,0:32:87.25:0,87,1077	1/1:3,18:21:60.17:835,60,0	1/1:1,21:22:60.20:864,60,0	1/1:0,15:15:45.15:648,45,0	1/1:1,20:21:60.20:864,60,0	1/1:1,16:17:7.95:568,8,0	0/0:26,0:26:75.24:0,75,929	1/1:0,20:20:51.17:733,51,0	0/0:20,0:20:60.19:0,60,744	0/0:22,0:22:66.21:0,66,818	0/0:9,0:9:27.08:0,27,335	1/1:1,24:26:75.24:1060,75,0	1/1:0,22:22:66.22:951,66,0	1/1:0,9:9:27.09:389,27,0	1/1:0,27:27:75.25:1080,75,0	0/0:19,0:19:57.18:0,57,707	0/0:29,0:29:84.23:0,84,1015	0/0:11,0:11:30.08:0,30,359
chr10	17694419	.	CCT	C	166.10	PASS	AB=0.961;AC=12;AF=0.222;AN=54;BaseQRankSum=2.475;DP=231;FS=13.134;HRun=0;HaplotypeScore=70.4212;InbreedingCoeff=-0.0994;MQ=50.15;MQ0=1;MQRankSum=-1.461;QD=1.68;ReadPosRankSum=-2.264;VQSLOD=-0.1842;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:21.02:0,21,280	0/0:3,0:3:6.02:0,6,93	0/0:6,0:1:2.84:0,3,14	0/1:9,0:8:2.24:2,0,82	0/0:12,0:12:15.53:0,16,249	0/1:10,0:10:44.81:45,0,184	0/1:13,0:13:9.74:10,0,218	0/0:10,1:11:22.87:0,23,453	0/0:11,1:12:17.63:0,18,271	0/1:12,1:13:1.02:1,0,536	0/0:4,0:4:9.03:0,9,144	0/0:8,0:8:15.73:0,16,265	1/1:4,0:4:9.02:107,9,0	0/0:12,0:12:5.53:0,6,151	0/0:5,0:5:9.03:0,9,126	0/1:8,1:9:18.62:19,0,242	./.	0/1:5,0:5:5.02:5,0,162	0/0:7,0:7:18.06:0,18,303	0/0:8,0:8:17.72:0,18,237	0/0:9,1:10:7.17:0,7,122	0/0:7,0:7:15.04:0,15,198	0/0:6,0:6:6.02:0,6,87	0/1:10,0:9:15.85:16,0,44	0/1:9,0:9:26.86:27,0,169	0/0:8,0:8:24.03:0,24,341	0/1:7,1:8:19.85:20,0,185	0/1:7,1:8:52.56:53,0,232
chr10	17694436	.	CT	C	10648.07	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-6.459;DP=389;FS=0.880;HRun=2;HaplotypeScore=63.6215;InbreedingCoeff=0.9633;MQ=63.45;MQ0=5;MQRankSum=-3.422;QD=29.58;ReadPosRankSum=3.581;VQSLOD=4.4009;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,19:16:39.13:504,39,0	1/1:1,5:5:15.05:193,15,0	0/0:13,0:8:20.56:0,21,209	0/0:16,0:13:32.87:0,33,326	1/1:0,20:20:40.68:510,41,0	1/1:0,14:14:34.66:431,35,0	1/1:0,18:18:33.09:411,33,0	1/1:1,20:19:53.91:666,54,0	1/1:0,17:16:42.14:543,42,0	1/1:1,20:20:57.18:736,57,0	1/1:0,8:8:18.06:232,18,0	1/1:0,13:12:28.64:354,29,0	1/1:0,10:9:27.09:348,27,0	1/1:0,19:19:43.69:546,44,0	1/1:0,9:9:21.07:272,21,0	1/1:0,16:16:41.67:543,42,0	1/1:0,8:6:15.05:194,15,0	1/1:0,11:11:33.11:427,33,0	1/1:1,9:10:27.09:349,27,0	1/1:1,10:11:26.76:321,27,0	1/1:0,17:16:27.35:350,27,0	1/1:0,8:8:15.05:195,15,0	1/1:2,11:12:30.10:386,30,0	1/1:0,18:14:27.06:349,27,0	1/1:0,15:15:33.11:428,33,0	1/1:1,15:15:45.15:584,45,0	1/1:0,12:12:33.11:426,33,0	1/1:0,10:10:27.09:350,27,0
chr10	17694548	.	C	CA	15824.37	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=-8.548;DP=558;FS=15.042;HRun=1;HaplotypeScore=54.7679;InbreedingCoeff=0.9983;MQ=85.74;MQ0=0;MQRankSum=-5.416;QD=39.07;ReadPosRankSum=6.038;VQSLOD=3.3719;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,23:24:54.18:798,54,0	1/1:0,10:10:30.10:450,30,0	0/0:16,0:16:42.14:0,42,540	0/0:26,0:26:72.22:0,72,901	1/1:0,20:20:57.15:829,57,0	1/1:1,27:28:81.24:1182,81,0	1/1:0,24:24:60.20:867,60,0	0/0:29,0:29:87.28:0,87,1118	0/0:19,0:19:57.18:0,57,732	1/1:1,15:16:42.12:590,42,0	1/1:0,21:21:63.21:944,63,0	1/1:0,13:13:33.11:494,33,0	1/1:0,11:11:33.11:495,33,0	1/1:0,18:18:48.16:719,48,0	1/1:3,19:22:42.14:629,42,0	1/1:0,15:15:36.02:539,36,0	1/1:1,24:25:69.23:1034,69,0	1/1:0,18:18:48.16:703,48,0	0/0:16,0:16:48.15:0,48,614	0/0:20,0:20:60.18:0,60,763	0/0:27,0:27:78.25:0,78,1012	1/1:0,20:20:51.17:764,51,0	1/1:0,18:18:54.18:809,54,0	1/1:0,26:26:62.70:900,63,0	1/1:1,25:26:63.21:943,63,0	1/1:0,24:24:72.23:1056,72,0	1/1:0,19:19:54.18:809,54,0	1/1:0,7:7:18.06:270,18,0
chr10	17700587	.	GGATAGATAGATAGATAGATAGATA	G	1942.07	PASS	AB=0.772;AC=13;AF=0.241;AN=54;BaseQRankSum=1.340;DP=612;FS=15.834;HRun=0;HaplotypeScore=316.8987;InbreedingCoeff=0.4588;MQ=60.68;MQ0=6;MQRankSum=-4.432;QD=10.39;ReadPosRankSum=1.483;VQSLOD=0.8230;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:20,25:44:99:358,0,118	0/0:11,0:11:15.05:0,15,425	0/0:26,0:19:6.49:0,6,85	0/0:18,0:16:3:0,3,26	0/0:14,0:21:21.07:0,21,816	0/0:9,0:13:18.06:0,18,599	0/0:16,0:14:14.98:0,15,316	0/0:33,0:31:42.13:0,42,1314	1/1:13,10:23:12.04:704,12,0	0/0:15,0:28:63.20:0,63,2395	0/0:11,0:11:6.02:0,6,166	1/1:9,7:16:3.01:78,3,0	1/1:9,16:25:12.04:688,12,0	1/1:9,9:18:3.01:36,3,0	0/0:17,0:34:30.10:0,30,833	0/0:11,0:22:30.09:0,30,773	0/0:9,0:22:14.75:0,15,407	0/0:9,0:17:21.01:0,21,413	0/0:22,0:22:24.08:0,24,1310	0/0:31,0:31:45.06:0,45,2328	0/0:31,0:31:60.19:0,60,3632	0/1:11,1:12:44.85:45,0,141	./.	1/1:15,12:27:3.01:173,3,0	0/1:14,0:21:15.91:16,0,214	0/0:10,0:25:45.15:0,45,1992	0/0:12,0:21:3.01:0,3,154	0/0:2,0:6:9.03:0,9,460
chr10	17700972	.	C	CAGAG	2282.26	PASS	AB=0.921;AC=41;AF=0.732;AN=56;BaseQRankSum=-1.819;DP=509;FS=5.763;HRun=0;HaplotypeScore=117.6967;InbreedingCoeff=-0.0281;MQ=84.05;MQ0=12;MQRankSum=-5.216;QD=5.45;ReadPosRankSum=1.496;VQSLOD=1.3947;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:27:44.37:70,0,44	1/1:6,0:6:2.01:24,2,0	0/0:35,0:21:52.76:0,53,576	0/0:55,0:24:36.59:0,37,571	0/1:20,0:20:2.91:3,0,41	1/1:17,0:17:15.37:163,15,0	1/1:19,0:19:6.20:143,6,0	1/1:29,0:29:6.54:129,7,0	1/1:14,0:14:32.08:247,32,0	1/1:27,0:27:0.79:97,1,0	0/1:14,0:14:12.70:53,0,13	0/1:15,0:15:36.99:37,0,38	0/1:16,0:16:23.78:50,0,24	1/1:11,0:11:3.40:70,3,0	0/1:3,12:15:15.78:197,0,16	0/1:4,10:15:19.99:78,0,20	1/1:16,0:16:16.26:109,16,0	0/1:13,0:13:20.99:157,0,21	1/1:16,0:16:7.51:166,8,0	1/1:9,0:9:6.01:48,6,0	1/1:18,0:18:9.93:75,10,0	1/1:12,0:12:9.26:64,9,0	1/1:6,0:6:1.55:4,2,0	0/1:15,0:15:32.09:32,0,63	1/1:14,0:14:20.64:143,21,0	0/1:26,0:26:30.39:118,0,30	1/1:17,0:17:10.98:161,11,0	0/1:11,0:11:2.39:2,0,13
chr10	17700983	.	G	GGA	508.71	PASS	AB=0.938;AC=22;AF=0.440;AN=50;BaseQRankSum=-1.114;DP=552;FS=19.615;HRun=0;HaplotypeScore=115.8180;InbreedingCoeff=0.0733;MQ=71.46;MQ0=15;MQRankSum=-0.712;QD=1.65;ReadPosRankSum=-1.420;VQSLOD=0.9660;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:35,0:34:6.64:7,0,113	./.	./.	./.	0/1:22,0:22:36.34:36,0,43	1/1:16,0:16:3.33:30,3,0	0/1:18,0:19:4.66:41,0,5	1/1:33,0:33:6.89:31,7,0	0/0:17,0:17:11.08:0,11,95	0/0:32,0:32:18.16:0,18,109	0/0:12,0:12:3.01:0,3,32	0/1:16,0:16:14.99:15,0,35	0/0:17,0:18:9.48:0,9,75	0/0:11,0:13:8.43:0,8,71	0/1:16,0:16:20.41:65,0,20	0/1:17,0:17:23.41:42,0,23	0/1:18,4:22:5.02:38,0,5	1/1:11,0:12:0.39:85,0,0	1/1:14,0:14:9.49:91,9,0	1/1:10,0:10:8.84:59,9,0	0/1:11,8:19:1.06:39,0,1	0/0:12,0:12:5.46:0,5,50	0/0:9,0:8:0.82:0,1,2	0/1:19,0:20:2.11:2,0,138	1/1:13,0:13:3.01:43,3,0	0/0:31,0:32:15.52:0,16,170	0/1:17,5:24:31.02:31,0,68	0/0:14,0:13:0.34:0,0,1
chr10	17702878	.	A	AC	5974.63	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-13.985;DP=595;FS=3.690;HRun=5;HaplotypeScore=66.6763;InbreedingCoeff=0.9975;MQ=83.87;MQ0=0;MQRankSum=-2.649;QD=31.95;ReadPosRankSum=2.536;VQSLOD=5.6908;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,32:35:93.30:1224,93,0	0/0:11,0:11:30.07:0,30,322	0/0:21,0:21:47.57:0,48,432	0/0:19,0:19:21.03:0,21,263	0/0:22,0:22:51.12:0,51,544	0/0:10,0:10:27.07:0,27,290	0/0:24,0:24:66.17:0,66,709	0/0:19,0:19:42.10:0,42,451	0/0:21,0:21:51.10:0,51,542	0/0:27,0:27:78.19:0,78,837	0/0:10,0:10:30.06:0,30,315	1/1:3,28:31:66.21:868,66,0	1/1:3,23:26:60.20:789,60,0	1/1:1,33:34:84.23:1086,84,0	0/0:27,0:27:69.16:0,69,741	0/0:20,0:20:42.09:0,42,451	0/0:29,0:29:75.15:0,75,784	0/0:22,0:22:57.11:0,57,602	0/0:13,0:13:24.06:0,24,258	0/0:9,0:9:27.06:0,27,284	0/0:41,0:41:99:0,117,1247	1/1:1,11:12:33.11:434,33,0	1/1:2,19:21:54.12:706,54,0	1/1:2,26:28:66.21:868,66,0	0/0:23,0:23:60.12:0,60,635	0/0:15,0:15:36.09:0,36,387	0/0:17,0:17:45.09:0,45,474	0/0:8,0:8:21.05:0,21,226
chr10	17705941	.	C	CGAGAGAGA	5047.01	PASS	AB=1.000;AC=33;AF=0.660;AN=50;BaseQRankSum=-7.501;DP=689;FS=5.169;HRun=0;HaplotypeScore=204.2065;InbreedingCoeff=0.6888;MQ=61.61;MQ0=18;MQRankSum=2.137;QD=11.19;ReadPosRankSum=-3.978;VQSLOD=2.7319;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:34:5.61:0,6,66	./.	./.	0/1:74,0:25:0:0,0,0	1/1:27,0:27:7.25:73,7,0	1/1:21,0:20:9.79:171,10,0	1/1:34,0:33:24.95:583,25,0	1/1:23,0:23:26.35:750,26,0	1/1:21,0:21:9.90:167,10,0	1/1:32,1:31:31.30:783,31,0	1/1:22,0:23:2.99:25,3,0	0/0:22,0:22:12.04:0,12,223	0/0:23,0:23:24.97:0,25,448	0/0:20,0:20:12.04:0,12,220	0/1:20,0:20:29.16:86,0,29	1/1:15,0:17:12.04:376,12,0	1/1:28,2:29:15.03:387,15,0	1/1:20,1:21:12.03:293,12,0	1/1:20,0:18:3.01:54,3,0	0/1:10,0:9:0:0,0,0	./.	0/0:16,0:16:17.27:0,17,333	0/0:23,0:23:21.07:0,21,387	0/0:27,0:27:8.95:0,9,158	1/1:21,0:20:9.02:206,9,0	1/1:26,1:26:22.88:541,23,0	1/1:22,0:22:15.79:349,16,0	1/1:5,0:6:9.03:203,9,0
chr10	17705976	.	GAGAGAGAT	G	3817.68	PASS	AB=1.000;AC=28;AF=0.500;AN=56;BaseQRankSum=7.110;DP=680;FS=18.683;HRun=0;HaplotypeScore=192.1831;InbreedingCoeff=0.0183;MQ=61.87;MQ0=19;MQRankSum=1.342;QD=8.09;ReadPosRankSum=-1.559;VQSLOD=0.9512;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:23:21.49:155,21,0	0/1:6,0:6:10.59:11,0,91	0/0:41,0:20:52.41:0,52,485	0/0:50,0:20:38.30:0,38,397	0/1:32,0:32:66.44:66,0,634	0/1:19,0:18:99:142,0,260	0/1:33,0:32:72.84:73,0,828	0/0:38,0:37:99:0,104,1732	0/1:31,0:31:99:201,0,430	0/1:30,0:28:37.10:37,0,1554	0/1:14,0:14:80.63:81,0,141	1/1:17,0:17:17.84:202,18,0	1/1:15,3:19:32.92:616,33,0	1/1:12,0:12:14.94:221,15,0	0/1:23,0:23:99:266,0,275	0/1:20,0:20:67.70:68,0,406	0/1:35,0:34:34.53:35,0,703	0/1:23,0:23:99:180,0,726	0/0:20,0:18:50.57:0,51,883	0/0:20,0:19:41.93:0,42,382	0/0:15,0:15:14.93:0,15,118	1/1:26,1:27:46.54:478,47,0	1/1:17,2:19:29.20:432,29,0	1/1:20,2:20:23.41:303,23,0	0/1:23,0:22:99:166,0,207	0/1:28,0:27:81.33:81,0,947	0/0:24,0:23:20.80:0,21,725	0/1:15,0:15:4.16:4,0,436
chr10	17705978	.	GAGAGAT	G	4324.61	PASS	AB=1.000;AC=28;AF=0.500;AN=56;BaseQRankSum=7.089;DP=676;FS=18.590;HRun=0;HaplotypeScore=175.4729;InbreedingCoeff=0.0088;MQ=64.51;MQ0=17;MQRankSum=0.115;QD=9.28;ReadPosRankSum=0.066;VQSLOD=2.6151;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:20,3:22:25.89:200,26,0	0/1:5,0:5:10.59:11,0,64	0/0:42,0:23:58.21:0,58,528	0/0:50,0:22:41:0,41,427	0/1:31,0:31:76.10:76,0,401	0/1:20,0:19:99:164,0,177	0/1:33,0:32:99:102,0,500	0/0:40,0:39:99:0,111,1460	0/1:29,0:29:99:235,0,170	0/1:30,0:29:62.99:63,0,1041	0/1:14,0:14:72.74:80,0,73	1/1:1,16:17:17.85:317,18,0	1/1:6,12:19:32.92:595,33,0	1/1:2,10:12:14.94:286,15,0	0/1:23,0:23:99:268,0,155	0/1:18,0:18:76.70:77,0,219	0/1:36,0:35:44.26:44,0,385	0/1:23,0:23:99:180,0,519	0/0:19,0:17:51.06:0,51,709	0/0:20,0:19:44.91:0,45,367	0/0:15,0:15:14.93:0,15,118	1/1:6,21:27:47.83:601,48,0	1/1:3,16:19:29.06:511,29,0	1/1:19,2:19:20.95:245,21,0	0/1:23,0:22:99:166,0,144	0/1:28,0:27:96.32:96,0,599	0/0:24,0:23:15.44:0,15,438	0/1:15,0:15:7.13:7,0,279
chr10	17705984	.	T	TTG	7184.97	PASS	AB=1.000;AC=33;AF=0.589;AN=56;BaseQRankSum=5.028;DP=599;FS=3.429;HRun=0;HaplotypeScore=130.3190;InbreedingCoeff=0.7646;MQ=77.92;MQ0=10;MQRankSum=-5.526;QD=20.77;ReadPosRankSum=-0.838;VQSLOD=5.0177;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,19:27:27.09:456,27,0	1/1:0,4:4:3.01:55,3,0	0/0:44,0:29:76.57:0,77,1040	0/0:49,0:29:68.66:0,69,1075	1/1:1,22:24:42.01:716,42,0	0/0:17,0:17:32.62:0,33,228	0/1:26,0:26:36.24:36,0,205	0/0:32,0:32:87.24:0,87,1375	0/0:24,0:24:39.46:0,39,353	1/1:3,19:23:42.17:1086,42,0	1/1:4,8:14:12.33:353,12,0	1/1:19,0:19:20.92:255,21,0	1/1:15,2:19:32.85:421,33,0	1/1:11,1:12:15.03:181,15,0	0/0:20,0:20:19.84:0,20,263	0/1:13,0:13:3.91:4,0,137	1/1:5,21:29:31.73:603,32,0	0/0:19,0:19:25.19:0,25,276	0/0:17,0:15:36.75:0,37,609	0/0:15,0:15:45.15:0,45,733	0/0:16,0:16:20.94:0,21,308	1/1:23,4:27:45.05:579,45,0	1/1:19,0:20:32.69:397,33,0	1/1:6,14:20:20.65:300,21,0	0/1:16,0:16:39.03:39,0,154	1/1:2,20:21:28.84:1098,29,0	1/1:2,11:15:14.90:257,15,0	1/1:0,13:13:18.06:348,18,0
chr10	17706207	.	TG	T	8021.80	PASS	AB=0.867;AC=37;AF=0.661;AN=56;BaseQRankSum=-8.791;DP=663;FS=13.094;HRun=10;HaplotypeScore=80.4723;InbreedingCoeff=0.8497;MQ=78.02;MQ0=0;MQRankSum=-1.270;QD=18.44;ReadPosRankSum=4.979;VQSLOD=4.4136;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:43:84.61:0,85,595	1/1:2,7:9:17.99:156,18,0	0/1:11,2:13:38.28:38,0,144	0/0:21,0:21:30.89:0,31,322	1/1:8,20:28:59.97:521,60,0	1/1:3,24:26:56.98:495,57,0	1/1:6,16:22:38.99:339,39,0	1/1:9,9:18:23.95:208,24,0	0/0:18,1:19:13.05:0,13,371	1/1:10,19:29:65.95:567,66,0	1/1:6,12:18:5.80:279,6,0	0/0:16,0:32:46.06:0,46,281	0/0:15,0:23:32.05:0,32,233	0/0:8,0:24:37.10:0,37,204	1/1:4,26:31:49.84:650,50,0	1/1:3,20:23:56.98:495,57,0	1/1:4,31:35:98.98:859,99,0	1/1:5,14:19:38.98:339,39,0	1/1:10,17:27:29.74:474,30,0	1/1:2,8:10:26.99:234,27,0	1/1:14,42:56:99:1039,120,0	0/0:10,0:20:20.04:0,20,111	0/0:9,0:19:17.20:0,17,95	0/0:5,2:27:2.20:0,2,189	1/1:7,13:20:41.98:364,42,0	1/1:4,21:25:65.94:568,66,0	1/1:6,16:22:41.02:345,41,0	1/1:0,2:2:6:52,6,0
chr10	17706913	.	CT	C	9926.83	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=9.270;DP=498;FS=0.453;HRun=7;HaplotypeScore=48.2480;InbreedingCoeff=0.9907;MQ=63.20;MQ0=0;MQRankSum=0.758;QD=24.69;ReadPosRankSum=4.593;VQSLOD=4.7841;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,30:32:72.39:869,72,0	1/1:0,8:8:21.05:214,21,0	0/0:10,0:8:21.07:0,21,263	0/0:6,0:5:11.99:0,12,114	1/1:4,21:25:60.06:591,60,0	1/1:2,21:23:60.14:612,60,0	1/1:4,18:22:42.09:428,42,0	0/0:28,0:28:72.19:0,72,850	1/1:0,11:11:33.08:337,33,0	1/1:4,16:20:48.05:471,48,0	1/1:0,25:25:72.12:723,72,0	1/1:0,13:13:39.09:398,39,0	1/1:3,13:16:39.09:398,39,0	1/1:0,11:11:27.06:274,27,0	1/1:1,8:9:24.05:245,24,0	1/1:0,15:15:39.09:398,39,0	1/1:1,30:31:63.14:643,63,0	1/1:2,23:25:57.09:571,57,0	0/0:23,0:23:60.17:0,60,730	0/0:16,0:16:42.13:0,42,528	0/0:13,0:12:36.10:0,36,440	1/1:0,11:11:33.08:337,33,0	1/1:1,17:18:39.05:387,39,0	1/1:1,18:19:42.10:428,42,0	1/1:3,19:22:45.10:459,45,0	1/1:2,11:13:36.04:354,36,0	1/1:4,21:25:54.11:546,54,0	1/1:0,8:8:24.05:245,24,0
chr10	17708319	.	G	GGGGCA	18029.87	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=4.168;DP=501;FS=12.143;HRun=0;HaplotypeScore=102.8711;InbreedingCoeff=0.9662;MQ=72.42;MQ0=0;MQRankSum=-13.167;QD=47.32;ReadPosRankSum=4.920;VQSLOD=4.4618;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,22:28:33.11:948,33,0	1/1:1,11:13:30.10:893,30,0	0/0:15,0:15:26.88:0,27,381	0/0:22,0:22:47.82:0,48,827	1/1:8,16:25:33:842,33,0	1/1:3,13:17:15.05:429,15,0	1/1:1,12:13:27.09:805,27,0	0/0:24,0:24:42.08:0,42,720	1/1:2,13:15:30.10:891,30,0	1/1:6,15:22:54.10:1220,54,0	1/1:3,8:11:15.05:448,15,0	1/1:4,12:16:30.10:859,30,0	1/1:0,10:12:26.64:805,27,0	1/1:5,15:23:36.12:968,36,0	1/1:2,14:17:30.10:896,30,0	1/1:1,11:13:21.07:627,21,0	1/1:3,12:15:24.55:718,25,0	1/1:1,12:13:27.09:808,27,0	0/0:17,0:17:41.99:0,42,712	0/0:21,0:21:54.18:0,54,1015	0/0:21,0:21:60.18:0,60,1121	1/1:3,15:18:21.07:568,21,0	1/1:8,12:21:30.10:830,30,0	1/1:4,8:12:15.05:448,15,0	1/1:7,20:28:45.15:1288,45,0	1/1:8,16:25:54.09:1315,54,0	1/1:3,16:19:42.14:1247,42,0	1/1:0,5:5:6.02:179,6,0
chr10	17708502	.	TC	T	10681.50	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=12.596;DP=629;FS=0.616;HRun=3;HaplotypeScore=63.0782;InbreedingCoeff=0.9997;MQ=86.90;MQ0=0;MQRankSum=-2.931;QD=34.02;ReadPosRankSum=2.828;VQSLOD=5.3861;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,154,2200	1/1:0,9:9:27.08:335,27,0	0/0:21,0:21:60.20:0,60,830	0/0:22,0:22:60.19:0,60,823	1/1:0,32:32:87.27:1076,87,0	1/1:0,18:18:42.13:521,42,0	1/1:0,23:23:60.19:744,60,0	0/0:16,0:16:39.12:0,39,545	1/1:0,16:16:45.14:558,45,0	1/1:0,9:9:27.08:335,27,0	1/1:0,16:16:45.14:558,45,0	0/0:28,0:28:81.27:0,81,1165	0/0:19,0:19:57.19:0,57,813	0/0:21,0:21:63.21:0,63,906	1/1:0,19:19:45.14:558,45,0	1/1:0,15:15:42.13:521,42,0	1/1:0,25:25:72.23:893,72,0	1/1:1,32:33:87.27:1079,87,0	0/0:15,0:15:45.12:0,45,612	0/0:25,0:25:72.23:0,72,1010	0/0:30,0:30:84.27:0,84,1189	0/0:16,0:16:48.16:0,48,690	0/0:16,0:16:48.16:0,48,691	0/0:34,0:34:99:0,99,1410	1/1:0,18:18:51.16:632,51,0	1/1:1,36:37:99:1312,108,0	1/1:0,31:31:90.28:1115,90,0	1/1:0,13:13:36.11:446,36,0
chr10	17710960	.	ATG	A	25341.99	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=12.084;DP=1035;FS=3.238;HRun=0;HaplotypeScore=144.2099;InbreedingCoeff=0.9995;MQ=66.49;MQ0=8;MQRankSum=-1.691;QD=32.74;ReadPosRankSum=8.191;VQSLOD=6.2290;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:11,33:42:99:1448,111,0	1/1:0,9:9:24.08:324,24,0	0/0:31,0:29:65.87:0,66,1019	0/0:44,0:42:94.86:0,95,1546	1/1:2,22:24:48.16:648,48,0	1/1:3,28:31:72.13:973,72,0	1/1:2,28:30:78.26:1054,78,0	0/0:42,0:42:99:0,111,1893	1/1:3,54:57:99:1864,138,0	1/1:5,51:56:99:1916,147,0	1/1:1,24:24:57.19:769,57,0	1/1:4,23:26:60.20:811,60,0	1/1:6,42:48:99:1541,114,0	1/1:4,46:50:99:1662,123,0	1/1:1,55:55:99:1865,138,0	1/1:2,40:42:99:1500,111,0	1/1:4,13:16:30.10:405,30,0	1/1:2,22:23:60.20:810,60,0	0/0:23,0:22:63.19:0,63,1049	0/0:31,0:31:87.30:0,87,1476	0/0:90,0:89:99:0,238,3970	1/1:2,23:25:63.21:849,63,0	1/1:3,27:30:69.23:931,69,0	1/1:5,41:44:99:1500,111,0	1/1:1,33:34:84.28:1135,84,0	1/1:6,44:51:99:1715,132,0	1/1:1,30:30:78.26:1054,78,0	1/1:0,17:17:42.05:567,42,0
chr10	17711143	.	A	ATG	35574.95	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-16.183;DP=1203;FS=17.612;HRun=0;HaplotypeScore=150.1075;InbreedingCoeff=1.0000;MQ=61.72;MQ0=3;MQRankSum=-4.323;QD=38.46;ReadPosRankSum=6.219;VQSLOD=4.7694;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,42:45:99:1737,104,0	1/1:0,17:17:39.13:663,39,0	0/0:38,0:38:90.26:0,90,1133	0/0:36,0:34:73.07:0,73,885	1/1:2,31:33:75.26:1275,75,0	1/1:1,29:29:75.26:1275,75,0	1/1:1,33:34:78.27:1326,78,0	0/0:52,0:52:99:0,120,1471	1/1:5,58:63:99:2790,166,0	1/1:9,53:62:99:2607,160,0	1/1:2,27:28:63.22:1069,63,0	1/1:8,45:52:99:1935,114,0	1/1:7,53:60:99:2444,144,0	1/1:10,42:52:99:1730,102,0	1/1:10,59:69:99:2697,160,0	1/1:9,56:65:99:2409,108,0	1/1:6,31:37:75.51:1416,76,0	1/1:5,14:20:45.15:762,45,0	0/0:30,0:30:54.17:0,54,702	0/0:38,0:38:99:0,105,1337	0/0:84,0:84:99:0,196,2483	1/1:5,35:41:93.32:1581,93,0	1/1:1,20:21:57.20:969,57,0	1/1:4,44:49:84.28:1410,84,0	1/1:5,40:45:90.31:1531,90,0	1/1:6,35:41:99:1724,105,0	1/1:7,31:38:84.29:1425,84,0	1/1:2,18:20:48.16:802,48,0
chr10	17711243	.	TTGTGTGTGTGTG	T	1636.97	PASS	AB=0.691;AC=5;AF=0.089;AN=56;BaseQRankSum=-1.764;DP=1033;FS=4.460;HRun=0;HaplotypeScore=408.8698;InbreedingCoeff=0.3510;MQ=47.36;MQ0=26;MQRankSum=3.443;QD=11.78;ReadPosRankSum=-0.816;VQSLOD=0.3453;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:53:40.12:0,40,1304	0/0:12,0:13:18.06:0,18,659	0/0:51,0:22:8.06:0,8,267	0/0:55,0:26:33.54:0,34,988	0/0:32,0:29:15.99:0,16,650	0/0:34,0:32:21.99:0,22,282	0/0:24,0:24:19.28:0,19,273	0/1:23,19:42:76.32:975,0,76	0/0:23,0:37:72.25:0,72,2396	0/0:44,0:47:99:0,117,4367	0/0:26,0:22:12.84:0,13,375	0/0:38,0:39:48.12:0,48,1336	0/0:35,0:36:37.06:0,37,1051	0/0:24,0:25:19.69:0,20,487	0/0:48,0:47:71.07:0,71,1282	0/0:49,0:49:99:0,112,1984	0/0:27,0:28:51.17:0,51,1543	0/0:25,0:25:39.13:0,39,1273	0/1:16,10:26:31.70:714,0,32	1/1:9,14:24:5.49:39,5,0	0/1:23,24:47:3.07:22,0,3	0/0:34,0:37:38.14:0,38,826	0/0:45,0:44:38.38:0,38,1266	0/0:38,0:41:35.44:0,35,976	0/0:45,0:44:36.63:0,37,530	0/0:44,0:42:99:0,102,3714	0/0:15,0:35:42.08:0,42,1269	0/0:12,0:12:21.07:0,21,751
chr10	17711250	.	T	TGTGTGTGA	8691.85	PASS	AB=1.000;AC=27;AF=0.482;AN=56;BaseQRankSum=3.787;DP=1020;FS=48.974;HRun=0;HaplotypeScore=334.9833;InbreedingCoeff=-0.1126;MQ=46.00;MQ0=28;MQRankSum=-1.031;QD=11.68;ReadPosRankSum=-0.128;VQSLOD=1.9149;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:58,0:55:99:102,0,101	0/1:12,0:12:93.57:100,0,94	0/0:53,0:19:31.04:0,31,243	0/0:65,0:28:45.89:0,46,594	0/1:32,0:29:44.02:199,0,44	1/1:5,28:33:5.52:549,6,0	1/1:5,21:33:14.64:334,15,0	0/0:36,0:36:63.46:0,63,400	0/0:36,0:36:88.89:0,89,1212	0/1:50,0:48:99:464,0,428	0/1:25,0:20:14.45:14,0,102	0/1:39,0:39:21.81:22,0,223	0/1:35,0:34:99:141,0,240	0/1:27,0:25:99:201,0,113	1/1:33,16:48:68.40:1426,68,0	1/1:25,23:48:99:2707,114,0	0/1:27,0:27:99:185,0,159	1/1:24,1:25:46.90:941,47,0	0/0:26,0:26:56.51:0,57,540	0/0:20,0:20:2.94:0,3,18	0/0:40,0:40:20.79:0,21,189	0/1:37,0:36:41.21:41,0,194	0/1:42,0:40:75.21:155,0,75	0/1:40,0:39:85.09:167,0,85	1/1:32,11:43:23.39:307,23,0	0/1:43,0:40:99:296,0,386	0/1:33,0:33:99:280,0,193	0/1:9,0:9:57.50:61,0,57
chr10	17711252	.	T	TGTGTGA	4917.45	PASS	AB=0.995;AC=26;AF=0.464;AN=56;BaseQRankSum=8.290;DP=1014;FS=30.542;HRun=0;HaplotypeScore=316.0297;InbreedingCoeff=-0.2022;MQ=46.39;MQ0=28;MQRankSum=-3.302;QD=6.49;ReadPosRankSum=4.837;VQSLOD=2.0602;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:56,0:53:71.14:71,0,128	0/1:12,0:12:39.84:40,0,100	0/0:54,0:16:31.35:0,31,244	0/0:68,0:30:51.35:0,51,635	0/1:30,0:27:52.10:171,0,52	1/1:35,0:33:23.87:250,24,0	1/1:32,1:33:12.33:222,12,0	0/0:35,0:35:76.01:0,76,540	0/0:37,0:37:88.62:0,89,1039	0/1:50,0:48:99:241,0,507	0/1:27,0:22:14.13:14,0,102	0/1:37,0:37:9.91:10,0,218	0/1:36,0:35:99:102,0,249	0/1:27,0:25:99:168,0,113	0/1:47,0:46:7.57:600,0,8	1/1:47,1:48:72.94:1357,73,0	0/1:27,0:27:89.43:89,0,169	1/1:24,1:25:13.83:713,14,0	0/0:26,0:26:63.80:0,64,530	0/1:19,0:19:0.01:0,0,0	0/0:36,0:36:17.51:0,18,130	0/1:38,0:37:34.15:34,0,205	0/1:43,0:41:99:112,0,102	0/1:40,0:39:91.84:100,0,92	0/1:38,4:40:12.61:302,0,13	0/1:43,0:40:99:145,0,403	0/1:34,0:34:99:176,0,236	0/1:9,0:9:1.43:1,0,84
chr10	17712400	.	A	ACAGCCAAAAGAAGC	63606.54	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-2.438;DP=540;FS=11.005;HRun=0;HaplotypeScore=190.5973;InbreedingCoeff=0.9747;MQ=85.93;MQ0=0;MQRankSum=-17.523;QD=168.72;ReadPosRankSum=2.786;VQSLOD=5.1109;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:16,10:32:75.26:3895,75,0	1/1:3,6:9:27.09:1667,27,0	0/0:28,0:28:56.78:0,57,2706	0/0:22,0:22:54.16:0,54,2041	1/1:11,3:14:36.59:1748,37,0	1/1:8,8:19:48.16:3149,48,0	1/1:10,10:23:60.21:3882,60,0	0/0:28,0:28:81.28:0,81,2950	1/1:9,12:22:60.21:3880,60,0	1/1:9,6:16:48.15:2960,48,0	1/1:5,2:9:21.07:1296,21,0	1/1:10,16:29:75.26:4787,75,0	1/1:9,11:22:60.21:4118,60,0	1/1:8,15:26:69.24:4586,69,0	1/1:8,15:23:63.22:3994,63,0	1/1:9,14:23:69.24:4624,69,0	1/1:6,6:14:36.12:2439,36,0	1/1:6,5:12:33.11:2250,33,0	0/0:29,0:29:84.24:0,84,3337	0/0:19,0:19:54.19:0,54,2379	0/0:37,0:37:99:0,108,4498	1/1:7,9:16:45.15:2761,45,0	1/1:8,0:8:18.06:841,18,0	1/1:5,3:9:18.06:1109,18,0	1/1:10,4:13:39.13:2575,39,0	1/1:9,7:17:45.15:3029,45,0	1/1:2,15:18:51.18:3584,51,0	1/1:0,2:2:6.02:433,6,0
chr10	17712797	.	G	GGGA	6704.52	PASS	AB=0.970;AC=37;AF=0.661;AN=56;BaseQRankSum=5.592;DP=488;FS=0.000;HRun=0;HaplotypeScore=148.9693;InbreedingCoeff=0.3335;MQ=31.44;MQ0=46;MQRankSum=-2.495;QD=16.80;ReadPosRankSum=0.613;VQSLOD=4.6983;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:31,0:27:15.57:139,16,0	1/1:6,0:5:10.88:151,11,0	0/0:7,0:1:2.90:0,3,16	0/0:17,0:3:3.01:0,3,35	1/1:15,0:14:15.05:224,15,0	0/1:14,0:12:63.59:64,0,95	1/1:28,2:25:25.32:475,25,0	0/0:20,0:16:40.65:0,41,646	1/1:23,0:21:41.82:480,42,0	0/1:28,0:26:1.13:838,0,1	1/1:8,1:8:5.84:73,6,0	1/1:28,0:20:41.84:507,42,0	1/1:27,0:24:17.20:584,17,0	1/1:18,0:20:32.93:349,33,0	1/1:21,3:20:17.08:302,17,0	1/1:7,3:9:6.20:154,6,0	0/1:17,0:15:66.17:356,0,66	0/1:11,2:11:73.67:297,0,74	0/0:11,0:9:24.08:0,24,419	0/0:11,0:11:15.02:0,15,205	0/0:22,0:17:20.86:0,21,351	1/1:14,0:13:8.27:100,8,0	1/1:11,0:9:2.33:21,2,0	1/1:21,0:17:18.05:146,18,0	1/1:10,1:7:8.77:52,9,0	0/1:21,2:22:20.30:753,0,20	0/1:15,0:15:8.67:521,0,9	0/1:5,0:3:24.45:121,0,24
chr10	17712799	.	G	GA	3191.33	PASS	AB=0.982;AC=30;AF=0.556;AN=54;BaseQRankSum=6.759;DP=485;FS=4.269;HRun=1;HaplotypeScore=148.0597;InbreedingCoeff=0.0524;MQ=30.72;MQ0=52;MQRankSum=-0.978;QD=7.98;ReadPosRankSum=2.963;VQSLOD=1.2326;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:31,0:27:8.63:29,0,9	1/1:6,0:5:8.97:103,9,0	./.	0/0:17,0:3:3.01:0,3,33	1/1:14,2:14:14.80:134,15,0	0/1:12,1:11:4.10:4,0,125	0/1:27,2:24:26.27:176,0,26	0/0:19,0:15:36.17:0,36,454	1/1:24,0:21:9.28:208,9,0	0/1:25,1:24:21.85:563,0,22	1/1:9,0:8:5.86:39,6,0	1/1:24,0:18:24.26:192,24,0	1/1:28,0:24:4.55:226,5,0	0/1:20,0:20:0.64:148,0,1	0/1:23,1:20:0.62:125,0,1	0/1:11,0:10:20.27:70,0,20	0/1:17,0:15:26.36:185,0,26	0/1:13,0:11:83.54:159,0,84	0/0:11,0:9:27.04:0,27,312	0/0:9,0:9:9.03:0,9,112	0/0:21,0:16:21:0,21,222	1/1:13,0:13:0.50:15,0,0	0/1:10,0:8:0.04:0,0,0	0/1:25,0:19:9.49:9,0,25	0/1:11,0:7:0:0,0,0	0/1:22,1:22:1.18:522,0,1	1/1:15,1:15:6.57:377,7,0	0/1:5,0:3:21.97:62,0,22
chr10	17712800	.	AG	A	2886.93	PASS	AB=0.840;AC=26;AF=0.481;AN=54;BaseQRankSum=5.700;DP=473;FS=2.428;HRun=1;HaplotypeScore=148.7452;InbreedingCoeff=-0.1556;MQ=30.72;MQ0=55;MQRankSum=-1.383;QD=7.95;ReadPosRankSum=1.868;VQSLOD=1.2256;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:27:16.83:17,0,24	1/1:2,3:4:8.99:114,9,0	./.	0/0:17,0:4:6.02:0,6,70	1/1:10,4:12:11.93:105,12,0	0/1:11,2:11:4.08:4,0,142	0/1:22,6:21:78.40:174,0,78	0/0:19,0:15:36.27:0,36,458	0/1:19,0:20:14.67:161,0,15	0/1:9,17:24:28.60:640,0,29	1/1:4,4:7:5.63:39,6,0	1/1:23,0:18:5.32:132,5,0	0/1:24,0:23:38.37:118,0,38	0/1:16,0:19:37.09:37,0,50	0/1:20,5:21:17.27:88,0,17	0/1:8,2:10:31.97:67,0,32	0/1:8,8:14:34.56:208,0,35	0/1:7,4:9:99:125,0,123	0/0:12,0:10:27.52:0,28,330	0/0:9,0:9:9.03:0,9,113	0/0:21,0:16:21:0,21,221	0/0:13,0:13:4.09:0,4,14	0/0:9,0:9:1.58:0,2,9	0/1:15,0:16:9.31:9,0,45	1/1:10,0:6:0.88:2,1,0	0/1:11,11:21:4.76:524,0,5	1/1:5,10:15:2.98:418,3,0	0/1:3,2:3:21.97:62,0,22
chr10	17712801	.	GA	G	2215.28	PASS	AB=0.941;AC=27;AF=0.500;AN=54;BaseQRankSum=5.965;DP=474;FS=0.534;HRun=1;HaplotypeScore=146.1664;InbreedingCoeff=-0.1745;MQ=28.22;MQ0=58;MQRankSum=-1.766;QD=6.24;ReadPosRankSum=2.367;VQSLOD=0.6949;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:21,8:24:5.69:89,0,6	1/1:3,2:4:8.91:75,9,0	./.	0/0:20,0:3:6.02:0,6,69	1/1:14,0:12:5.17:23,5,0	0/0:13,0:11:13.86:0,14,159	0/1:28,0:21:68.09:68,0,113	0/0:19,0:15:38.12:0,38,438	1/1:17,9:20:0.98:302,1,0	0/1:27,0:24:63.34:276,0,63	0/1:8,0:7:0:0,0,1	1/1:18,5:15:7.83:281,8,0	0/1:22,6:23:47.46:298,0,47	0/1:16,3:18:46.12:128,0,46	0/0:25,0:21:5.97:0,6,57	0/1:11,0:10:27.92:28,0,57	0/1:17,0:15:45.78:127,0,46	0/1:11,0:9:33.29:33,0,132	0/0:12,0:10:24.53:0,25,277	0/1:9,0:9:11.91:12,0,71	0/0:21,0:16:11.83:0,12,149	1/1:10,4:13:0.22:24,0,0	0/1:9,2:9:12.93:14,0,13	0/1:16,4:14:19.16:65,0,19	1/1:10,0:6:0.88:2,1,0	0/1:22,1:22:40.36:285,0,40	0/1:17,0:16:1.65:217,0,2	0/1:5,0:3:21.45:22,0,21
chr10	17712802	.	AG	A	975.30	PASS	AB=0.982;AC=18;AF=0.333;AN=54;BaseQRankSum=3.925;DP=481;FS=1.828;HRun=1;HaplotypeScore=151.5114;InbreedingCoeff=-0.2273;MQ=27.64;MQ0=62;MQRankSum=-1.902;QD=3.35;ReadPosRankSum=2.400;VQSLOD=0.3658;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:24:15.61:16,0,31	1/1:6,0:5:5.45:45,5,0	./.	0/0:21,0:2:3.01:0,3,38	0/0:14,0:12:0.02:0,0,8	0/0:13,0:11:13.65:0,14,159	0/1:28,0:21:20.65:21,0,126	0/0:18,0:15:19.97:0,20,401	0/1:27,0:20:32.81:117,0,33	0/1:26,1:24:68.32:186,0,68	1/1:8,0:7:0.94:2,1,0	0/1:23,0:15:18.62:115,0,19	0/1:28,0:23:95.83:96,0,118	0/1:19,0:18:6.19:6,0,114	0/0:25,0:21:4.79:0,5,70	0/0:11,0:10:0.76:0,1,64	0/1:18,0:15:51.96:92,0,52	0/0:11,0:9:4.90:0,5,156	0/0:12,0:10:8.35:0,8,238	0/0:9,0:9:9:0,9,80	0/0:15,0:12:12.03:0,12,132	0/0:16,0:14:4.19:0,4,13	0/0:11,0:9:3:0,3,29	0/1:21,0:14:19.95:20,0,34	1/1:10,0:6:0.89:2,1,0	0/1:22,2:22:82.91:225,0,83	0/1:16,2:16:19.51:167,0,20	0/1:5,0:3:1.41:1,0,15
chr10	17712814	.	AG	A	4692.65	PASS	AB=0.683;AC=44;AF=0.786;AN=56;BaseQRankSum=3.301;DP=515;FS=12.401;HRun=2;HaplotypeScore=120.9326;InbreedingCoeff=0.3866;MQ=27.98;MQ0=83;MQRankSum=1.017;QD=11.47;ReadPosRankSum=2.703;VQSLOD=2.2257;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:16,11:19:3.04:74,3,0	1/1:3,5:7:11.63:151,12,0	0/0:25,2:3:2.95:0,3,31	0/0:38,0:3:5.22:0,5,38	1/1:1,13:10:6.49:78,6,0	1/1:4,7:9:11.75:153,12,0	1/1:13,18:22:15.27:186,15,0	0/0:20,0:16:18.58:0,19,234	1/1:9,14:16:27.09:344,27,0	1/1:5,19:19:44.72:584,45,0	0/1:4,7:7:0.01:0,0,0	1/1:7,14:13:25.63:298,26,0	1/1:14,15:20:16.66:391,17,0	1/1:7,10:16:27.13:295,27,0	1/1:12,11:18:7.27:80,7,0	1/1:5,9:10:9.03:115,9,0	1/1:2,18:16:22.02:311,22,0	1/1:6,4:10:25.87:276,26,0	0/1:4,5:7:31.61:96,0,32	0/1:8,1:9:6.94:19,0,7	0/0:11,10:17:2.59:0,3,35	0/1:4,11:13:4.50:29,0,4	1/1:5,8:9:2.95:34,3,0	1/1:11,8:14:4.06:73,4,0	1/1:5,9:7:3.01:39,3,0	1/1:7,17:18:40.42:588,40,0	1/1:5,14:16:38.79:451,39,0	1/1:2,2:3:3.01:30,3,0
chr10	17712815	.	G	GA	4786.59	PASS	AB=0.974;AC=44;AF=0.786;AN=56;BaseQRankSum=1.977;DP=513;FS=16.566;HRun=1;HaplotypeScore=120.3773;InbreedingCoeff=0.2506;MQ=28.60;MQ0=80;MQRankSum=0.424;QD=11.65;ReadPosRankSum=3.571;VQSLOD=2.0918;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:21,5:19:1.69:72,2,0	1/1:8,0:7:11.62:151,12,0	0/0:29,0:6:2.89:0,3,30	0/0:39,0:3:5.95:0,6,48	1/1:16,0:12:6.38:77,6,0	1/1:9,1:8:11.75:150,12,0	1/1:22,9:22:11.55:201,12,0	0/1:21,0:18:17.81:18,0,204	1/1:15,7:16:27.09:353,27,0	1/1:20,2:18:44.28:568,44,0	0/0:10,1:7:0.19:0,0,0	1/1:17,4:13:25.63:320,26,0	1/1:19,10:20:21.91:416,22,0	1/1:12,3:14:22.49:314,22,0	1/1:15,7:17:6.02:76,6,0	1/1:11,4:11:9.03:115,9,0	1/1:20,0:16:21.99:283,22,0	1/1:5,5:10:24.08:330,24,0	0/1:9,0:7:31.61:96,0,32	0/1:9,0:9:6.94:19,0,7	0/0:20,0:17:2.59:0,3,35	0/1:15,2:15:0.84:40,0,1	1/1:11,2:9:3.01:34,3,0	1/1:9,8:12:4.43:74,4,0	1/1:10,2:5:1.01:35,1,0	1/1:22,2:18:38.60:576,39,0	1/1:16,1:15:38.78:437,39,0	1/1:4,0:3:3.01:30,3,0
chr10	17715167	.	CTGTGTGTGTGTGTGTGCATAAATG	C	12233.88	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=11.931;DP=700;FS=3.727;HRun=0;HaplotypeScore=417.5867;InbreedingCoeff=0.9655;MQ=66.71;MQ0=5;MQRankSum=-12.175;QD=88.01;ReadPosRankSum=5.735;VQSLOD=3.5164;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:11,11:23:33.11:2071,33,0	0/0:11,0:11:30.10:0,30,2447	0/0:46,0:32:58.44:0,58,2763	0/0:27,0:17:21.01:0,21,728	0/0:25,0:27:71.52:0,72,6164	0/0:18,0:18:48.15:0,48,4487	0/0:18,0:18:42.13:0,42,4019	0/0:29,0:29:48.16:0,48,3114	0/0:12,0:29:67.29:0,67,3946	0/0:27,0:27:60.21:0,60,6296	0/0:26,0:26:66.23:0,66,6774	1/1:7,17:24:44.94:2860,45,0	1/1:7,12:19:27.09:1716,27,0	1/1:6,7:13:24.55:1503,25,0	0/0:23,0:23:57.20:0,57,5716	0/0:34,0:35:93.31:0,93,8268	0/0:25,0:26:72.25:0,72,6880	0/0:18,0:18:51.18:0,51,4697	0/0:29,0:29:66.23:0,66,5968	0/0:23,0:23:60.21:0,60,5977	0/0:57,0:57:99:0,153,14715	1/1:8,17:25:42.14:2662,42,0	1/1:6,8:14:21.01:1232,21,0	1/1:19,2:21:3.01:191,3,0	0/0:22,0:23:60.21:0,60,5826	0/0:20,0:20:42.12:0,42,3533	0/0:29,0:30:81.28:0,81,7527	0/0:18,0:18:45.15:0,45,4972
chr10	17715189	.	A	ATG	660.52	PASS	AB=0.941;AC=3;AF=0.054;AN=56;BaseQRankSum=4.423;DP=625;FS=1.701;HRun=0;HaplotypeScore=145.3392;InbreedingCoeff=0.6263;MQ=58.38;MQ0=8;MQRankSum=-2.938;QD=14.68;ReadPosRankSum=-1.877;VQSLOD=3.3808;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:11.45:0,11,119	0/0:14,0:14:30.08:0,30,354	0/0:46,0:26:20.59:0,21,290	0/0:35,0:21:10.64:0,11,182	0/0:24,0:24:51.10:0,51,591	0/0:16,0:16:42.13:0,42,508	0/0:17,0:17:42.12:0,42,500	0/0:17,0:17:42.12:0,42,501	1/1:12,17:29:50.24:755,50,0	0/0:25,0:25:69.19:0,69,818	0/0:24,0:25:63.01:0,63,730	0/0:18,0:18:42.61:0,43,209	0/0:12,0:12:25.57:0,26,126	0/0:8,0:8:21.44:0,21,102	0/0:24,0:24:66.19:0,66,790	0/0:29,0:29:72.19:0,72,844	0/0:30,0:30:66.14:0,66,762	0/0:21,0:21:42.15:0,42,511	0/0:29,0:29:60.17:0,60,711	0/0:24,0:24:60.18:0,60,728	0/0:59,0:59:99:0,138,1597	0/0:17,0:17:16.16:0,16,157	0/0:8,0:8:17.04:0,17,83	0/0:3,0:3:2.84:0,3,14	0/0:21,1:22:11.79:0,12,634	0/0:16,0:16:38.95:0,39,472	0/0:29,0:28:60.16:0,60,711	0/1:15,1:16:0.23:0,0,498
chr10	17716207	.	G	GA	3115.60	PASS	AB=0.609;AC=15;AF=0.268;AN=56;BaseQRankSum=5.529;DP=507;FS=0.000;HRun=9;HaplotypeScore=54.4489;InbreedingCoeff=0.8558;MQ=66.13;MQ0=1;MQRankSum=0.464;QD=21.34;ReadPosRankSum=0.477;VQSLOD=4.1773;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,35:39:58.47:844,58,0	0/0:12,0:12:32.96:0,33,281	0/0:9,0:8:14.92:0,15,121	0/0:11,0:11:26.99:0,27,234	0/0:23,1:24:29.79:0,30,488	0/0:18,0:18:41.99:0,42,365	0/0:19,0:20:56.02:0,56,475	0/0:26,0:26:29.23:0,29,418	1/1:3,8:11:21.06:232,21,0	0/0:21,0:21:53.99:0,54,468	0/0:21,0:21:53.97:0,54,465	1/1:3,15:18:49.36:526,49,0	1/1:1,12:13:36.10:398,36,0	1/1:5,11:16:7.04:306,7,0	0/0:15,0:15:5.80:0,6,279	0/0:10,0:10:26.98:0,27,234	0/0:25,0:25:71.97:0,72,625	0/0:27,0:27:71.92:0,72,613	0/0:12,0:12:23.98:0,24,208	0/0:13,0:13:32.97:0,33,282	0/0:10,0:10:23.98:0,24,208	1/1:5,13:18:39.11:431,39,0	0/1:5,9:14:19.02:266,0,19	1/1:3,14:17:7.10:306,7,0	0/0:18,0:18:50.99:0,51,443	0/0:33,0:34:79.96:0,80,679	0/0:23,0:22:56.98:0,57,495	0/0:12,0:12:35.99:0,36,312
chr10	17716765	.	GA	G	1968.79	PASS	AB=0.839;AC=23;AF=0.411;AN=56;BaseQRankSum=0.049;DP=584;FS=15.650;HRun=14;HaplotypeScore=70.9150;InbreedingCoeff=0.5092;MQ=78.52;MQ0=0;MQRankSum=1.374;QD=6.17;ReadPosRankSum=2.285;VQSLOD=0.9068;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:38:33.11:0,33,171	0/0:7,0:7:11.97:0,12,98	0/1:25,1:23:11.55:12,0,120	0/0:15,0:13:13.97:0,14,87	0/0:25,0:25:24.82:0,25,335	0/1:10,11:21:66.75:181,0,67	1/1:5,14:20:9.86:204,10,0	1/1:8,14:24:38.88:257,39,0	0/0:11,1:13:12.17:0,12,232	0/1:22,3:25:12.82:13,0,312	0/1:13,4:19:22.97:23,0,207	0/0:3,0:17:28.67:0,29,161	0/0:5,0:18:23.05:0,23,142	0/0:11,0:23:34.64:0,35,218	1/1:4,11:17:27.85:176,28,0	1/1:6,12:21:13.89:216,14,0	0/0:22,2:27:17.12:0,17,482	1/1:4,12:17:36.78:238,37,0	1/1:8,13:22:23.97:226,24,0	0/1:16,12:29:17.09:156,0,17	1/1:4,10:15:28.78:189,29,0	0/1:13,1:20:2.18:2,0,73	0/0:8,0:19:17.36:0,17,100	0/0:3,0:18:37.26:0,37,214	1/1:3,15:18:40.70:273,41,0	0/0:28,3:31:7.78:0,8,361	0/1:21,3:24:2.12:2,0,263	0/0:13,0:13:30.02:0,30,274
chr10	17717356	.	AGTGTGTGT	A	459.72	PASS	AB=0.774;AC=14;AF=0.269;AN=52;BaseQRankSum=1.103;DP=537;FS=10.032;HRun=0;HaplotypeScore=132.5889;InbreedingCoeff=0.0834;MQ=65.07;MQ0=15;MQRankSum=0.172;QD=2.02;ReadPosRankSum=2.554;VQSLOD=2.1363;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:25,1:26:5.90:43,6,0	0/0:9,0:9:9.02:0,9,187	./.	./.	0/0:9,0:8:3:0,3,26	1/1:13,10:23:3.01:75,3,0	1/1:17,6:23:1.81:5,2,0	0/0:22,0:22:8.18:0,8,50	0/0:9,0:18:11.92:0,12,219	0/0:23,0:24:46.95:0,47,1055	0/0:7,0:12:9.50:0,10,202	0/0:19,0:19:11.60:0,12,119	0/1:9,0:15:15.30:20,0,15	0/0:8,0:14:0:0,0,0	0/1:11,16:27:23.74:121,0,24	0/1:12,2:14:5.05:147,0,5	0/0:18,0:29:21.07:0,21,527	0/1:11,8:19:59:59,0,123	0/0:20,0:18:3.01:0,3,73	0/1:8,0:11:2.55:3,0,5	0/1:34,1:32:23.30:23,0,63	0/1:11,0:16:16.06:32,0,16	0/0:5,0:8:2.99:0,3,24	0/0:22,0:33:2.73:0,3,24	0/1:12,6:18:4.70:69,0,5	0/0:14,0:14:15.05:0,15,325	0/0:8,0:15:22.87:0,23,478	0/0:9,0:12:6.02:0,6,144
chr10	17719460	.	AT	A	6385.37	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=14.165;DP=574;FS=0.000;HRun=9;HaplotypeScore=56.7808;InbreedingCoeff=0.9986;MQ=76.84;MQ0=0;MQRankSum=-2.226;QD=23.48;ReadPosRankSum=2.777;VQSLOD=5.5918;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:93.24:0,93,1051	1/1:3,9:12:20.93:192,21,0	0/0:10,0:10:30.06:0,30,333	0/0:14,0:13:33.66:0,34,362	1/1:3,14:17:41.92:367,42,0	1/1:1,23:24:62.99:569,63,0	1/1:2,22:24:66.03:604,66,0	0/0:35,0:36:96.10:0,96,1071	0/0:18,0:18:51.14:0,51,580	1/1:3,22:25:66.01:597,66,0	1/1:1,9:10:27.01:247,27,0	0/0:27,0:27:72.04:0,72,802	0/0:19,0:19:51.15:0,51,588	0/0:23,1:24:35.72:0,36,664	1/1:1,22:23:51.03:467,51,0	1/1:2,15:17:42.02:384,42,0	1/1:0,30:30:87.05:796,87,0	1/1:0,19:19:54.03:494,54,0	0/0:23,0:23:54.16:0,54,623	0/0:16,0:16:42.12:0,42,485	0/0:19,0:19:42.12:0,42,485	0/0:17,0:17:48.14:0,48,551	0/0:21,0:21:54.15:0,54,615	0/0:27,0:27:72.21:0,72,831	1/1:1,24:25:69.04:632,69,0	1/1:1,19:20:57:515,57,0	1/1:2,15:17:35.62:329,36,0	1/1:0,9:9:21.01:192,21,0
chr10	17721470	.	A	ATCTT	1786.53	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-6.967;DP=725;FS=1.727;HRun=0;HaplotypeScore=150.5418;InbreedingCoeff=0.9995;MQ=79.13;MQ0=0;MQRankSum=-2.509;QD=74.44;ReadPosRankSum=0.551;VQSLOD=5.0879;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,114,2329	0/0:15,0:15:45.15:0,45,918	0/0:32,0:32:74.67:0,75,1571	0/0:25,0:25:57.74:0,58,844	0/0:25,0:25:66.21:0,66,1337	0/0:26,0:26:75.26:0,75,1567	0/0:20,0:20:60.21:0,60,1252	0/0:34,0:34:96.33:0,96,1963	1/1:0,23:24:66.23:1881,66,0	0/0:28,0:28:84.28:0,84,1678	0/0:19,0:19:54.19:0,54,1132	0/0:25,0:25:69.24:0,69,1434	0/0:25,0:25:75.21:0,75,1474	0/0:17,0:17:48.16:0,48,980	0/0:26,0:26:78.27:0,78,1605	0/0:19,0:19:57.17:0,57,1120	0/0:22,0:22:66.23:0,66,1347	0/0:28,0:28:81.25:0,81,1617	0/0:32,0:31:93.30:0,93,1845	0/0:22,0:22:63.20:0,63,1277	0/0:45,0:45:99:0,131,2678	0/0:18,0:18:54.19:0,54,1109	0/0:27,0:27:78.25:0,78,1534	0/0:39,0:39:99:0,117,2355	0/0:19,0:19:57.17:0,57,1149	0/0:29,0:29:81.26:0,81,1653	0/0:35,0:35:99:0,105,2185	0/0:10,0:10:30.10:0,30,629
chr10	17722232	.	G	GTGAA	16623.32	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-13.977;DP=638;FS=6.628;HRun=0;HaplotypeScore=103.9197;InbreedingCoeff=0.9972;MQ=98.28;MQ0=0;MQRankSum=-7.286;QD=59.80;ReadPosRankSum=6.187;VQSLOD=6.5966;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:81.26:0,81,1431	1/1:1,12:13:36.09:885,36,0	0/0:28,0:28:78.27:0,78,1343	0/0:51,0:50:99:0,120,2081	1/1:1,19:21:48.05:1042,48,0	1/1:0,18:17:48.16:1255,48,0	1/1:2,12:14:33.11:863,33,0	0/0:26,0:26:75.26:0,75,1350	1/1:3,5:9:15.05:392,15,0	1/1:3,19:23:63.22:1547,63,0	1/1:4,12:16:30.02:668,30,0	0/0:19,0:19:48.16:0,48,872	0/0:20,0:20:57.20:0,57,1025	0/0:19,0:19:48.16:0,48,855	1/1:4,7:12:24.06:567,24,0	1/1:2,11:13:30.10:745,30,0	1/1:3,28:31:81.28:2079,81,0	1/1:4,25:29:63.17:1591,63,0	0/0:27,0:27:72.23:0,72,1270	0/0:18,0:18:48.15:0,48,837	0/0:46,0:46:99:0,108,1896	0/0:17,0:17:45.15:0,45,818	0/0:27,0:27:69.24:0,69,1249	0/0:29,0:29:69.24:0,69,1246	1/1:3,13:16:30.06:727,30,0	1/1:4,30:36:96.33:2458,96,0	1/1:0,12:12:36.12:940,36,0	1/1:2,12:14:33.11:864,33,0
chr10	17722344	.	TGC	T	1538.74	PASS	AB=0.952;AC=38;AF=0.826;AN=46;BaseQRankSum=-1.399;DP=396;FS=22.699;HRun=0;HaplotypeScore=115.8801;InbreedingCoeff=-0.0034;MQ=33.15;MQ0=69;MQRankSum=-1.036;QD=4.33;ReadPosRankSum=0.038;VQSLOD=1.3785;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:20,0:13:20.02:36,0,20	1/1:6,1:6:11.76:85,12,0	./.	./.	1/1:9,1:9:2.99:24,3,0	1/1:22,5:25:14.12:92,14,0	1/1:21,1:13:5.98:47,6,0	1/1:18,0:14:21.66:122,22,0	1/1:12,0:9:2.60:10,3,0	1/1:13,1:11:6.11:101,6,0	./.	1/1:4,0:4:2.64:25,3,0	0/1:6,0:5:0.34:47,0,0	1/1:7,0:4:5.97:44,6,0	./.	0/1:12,1:10:0.65:52,0,1	1/1:21,1:18:8.30:86,8,0	0/1:17,6:22:54.97:159,0,55	1/1:7,1:11:4.02:126,4,0	0/0:8,1:7:2.79:0,3,15	0/1:39,1:30:42.44:132,0,42	./.	0/1:4,0:1:0:0,0,0	1/1:21,0:14:7.29:51,7,0	1/1:11,2:13:5.78:34,6,0	1/1:28,1:25:13.69:254,14,0	1/1:19,0:16:7.14:98,7,0	1/1:8,0:2:2.98:21,3,0
chr10	17722346	.	CGT	C	273.34	PASS	AB=0.976;AC=16;AF=0.364;AN=44;BaseQRankSum=2.152;DP=386;FS=0.929;HRun=0;HaplotypeScore=122.9725;InbreedingCoeff=0.0350;MQ=32.97;MQ0=68;MQRankSum=-3.031;QD=1.20;ReadPosRankSum=2.332;VQSLOD=2.4114;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:13:17.45:0,17,140	1/1:5,2:6:1.77:32,2,0	./.	./.	0/1:9,0:8:0:0,0,0	0/1:26,1:25:17.33:17,0,22	1/1:21,0:12:1.22:4,1,0	0/0:16,0:13:15.03:0,15,80	0/0:12,0:9:1.25:0,1,3	1/1:12,1:10:9.01:66,9,0	./.	0/0:4,0:4:2.66:0,3,24	0/1:6,0:5:4.85:5,0,43	0/1:7,0:4:0.30:1,0,0	./.	0/1:12,0:9:5.69:19,0,6	0/1:21,1:18:7.43:25,0,7	0/1:23,1:22:9.86:58,0,10	0/1:13,0:10:28.80:29,0,79	0/0:10,0:8:6:0,6,64	0/1:37,0:28:3.67:4,0,110	./.	./.	0/0:21,0:14:15.21:0,15,117	0/0:13,1:14:2.48:0,2,7	0/1:25,4:25:20.98:133,0,21	0/0:19,0:16:9.28:0,9,70	0/0:8,0:2:0:0,0,0
chr10	17722350	.	CGT	C	625.11	PASS	AB=0.876;AC=18;AF=0.409;AN=44;BaseQRankSum=3.431;DP=396;FS=2.800;HRun=0;HaplotypeScore=126.2083;InbreedingCoeff=-0.0311;MQ=33.02;MQ0=68;MQRankSum=-4.223;QD=2.50;ReadPosRankSum=3.161;VQSLOD=2.5326;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:15:14.82:0,15,118	1/1:3,4:6:11.78:96,12,0	./.	./.	./.	0/1:24,2:24:3.56:26,0,4	1/1:21,0:11:1.55:5,2,0	0/0:5,0:13:1.82:0,2,68	0/0:13,0:10:0.75:0,1,2	0/1:8,6:11:2.23:71,0,2	./.	0/0:5,0:5:3.13:0,3,25	0/1:5,0:4:0.68:1,0,21	0/0:12,0:9:3.81:0,4,46	./.	1/1:11,1:9:0.57:13,1,0	0/1:11,12:19:25.45:123,0,25	0/1:23,0:20:31.05:61,0,31	0/1:16,0:13:17.46:17,0,102	0/0:9,0:7:3:0,3,39	0/1:36,0:27:3.32:3,0,108	./.	0/0:5,0:2:3:0,3,25	0/0:25,0:18:21.21:0,21,166	0/1:14,1:15:0.03:0,0,0	0/1:21,7:24:30.75:235,0,31	0/1:11,6:15:54.68:56,0,55	1/1:6,1:1:3.01:40,3,0
chr10	17722354	.	CGT	C	395.49	PASS	AB=0.911;AC=20;AF=0.455;AN=44;BaseQRankSum=4.154;DP=398;FS=7.428;HRun=0;HaplotypeScore=124.3958;InbreedingCoeff=0.2583;MQ=33.33;MQ0=67;MQRankSum=-5.592;QD=1.69;ReadPosRankSum=4.683;VQSLOD=1.6828;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:16:14.95:0,15,114	1/1:7,0:6:6.94:29,7,0	./.	./.	./.	0/1:15,11:24:0.87:57,0,1	1/1:20,2:12:1.61:14,2,0	0/1:16,0:12:1.14:1,0,48	0/0:11,2:10:0.75:0,1,3	1/1:14,0:11:14.01:62,14,0	./.	0/0:6,0:6:2.93:0,3,25	1/1:4,0:3:0.03:1,0,0	0/0:14,0:12:6.09:0,6,49	./.	1/1:6,6:9:5.92:59,6,0	0/1:20,0:16:0.55:39,0,1	0/1:17,5:19:1.81:118,0,2	0/0:13,0:11:15.96:0,16,90	0/0:9,0:7:2.99:0,3,25	0/1:39,0:28:27:27,0,59	./.	0/0:5,0:2:3:0,3,25	0/0:30,0:23:24.67:0,25,192	0/0:11,3:14:2.93:0,3,20	1/1:26,0:22:1.20:63,1,0	0/1:18,1:17:24.71:48,0,25	1/1:7,0:1:2.37:8,2,0
chr10	17722356	.	TGC	T	1297.23	PASS	AB=0.986;AC=35;AF=0.795;AN=44;BaseQRankSum=-4.261;DP=403;FS=14.790;HRun=0;HaplotypeScore=117.6474;InbreedingCoeff=-0.1309;MQ=32.35;MQ0=66;MQRankSum=1.629;QD=3.55;ReadPosRankSum=-2.678;VQSLOD=0.5363;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:15:8.63:97,9,0	1/1:7,0:6:11.85:77,12,0	./.	./.	0/1:9,0:8:0:0,0,0	1/1:26,0:24:11.30:71,11,0	1/1:23,0:13:5.95:42,6,0	1/1:14,0:11:21.03:121,21,0	1/1:13,0:10:2.94:18,3,0	0/1:12,2:11:10.88:80,0,11	./.	1/1:6,0:6:5.60:37,6,0	1/1:4,0:3:8.92:64,9,0	1/1:15,0:13:15.44:122,15,0	./.	0/1:12,0:9:9.42:26,0,9	0/1:23,0:19:23.49:57,0,23	0/1:23,0:20:83.89:84,0,93	1/1:13,0:11:9.68:58,10,0	./.	0/1:41,0:30:13.55:35,0,14	./.	0/1:5,0:2:0:0,0,0	1/1:30,0:23:13.26:99,13,0	0/1:14,0:14:4.73:13,0,5	0/1:26,0:22:29.01:166,0,29	1/1:17,2:17:6.37:127,6,0	1/1:7,0:1:2.97:20,3,0
chr10	17722990	.	GT	G	6405.39	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=10.985;DP=493;FS=44.544;HRun=6;HaplotypeScore=109.1645;InbreedingCoeff=0.9398;MQ=65.61;MQ0=4;MQRankSum=-11.431;QD=19.41;ReadPosRankSum=5.270;VQSLOD=2.0695;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,7:14:10.71:170,11,0	1/1:3,13:16:28.39:360,28,0	0/0:24,0:17:13.21:0,13,432	0/0:23,0:16:24.73:0,25,312	1/1:1,19:20:34.76:358,35,0	1/1:4,8:11:22.63:226,23,0	1/1:4,7:11:6.27:185,6,0	0/0:29,0:29:81.22:0,81,1033	1/1:2,13:15:29.62:280,30,0	1/1:3,20:22:39.66:535,40,0	1/1:2,16:18:48.02:452,48,0	1/1:5,12:17:25.70:326,26,0	1/1:1,6:6:15.01:142,15,0	1/1:2,2:4:8.99:74,9,0	1/1:6,12:18:22.96:385,23,0	1/1:3,6:9:22.40:226,22,0	1/1:4,5:9:15:140,15,0	1/1:2,4:5:12.02:124,12,0	0/0:27,0:27:72.23:0,72,937	0/0:40,0:40:99:0,108,1386	0/0:20,0:20:60.16:0,60,745	1/1:9,11:19:32.78:285,33,0	1/1:7,15:20:35.68:324,36,0	1/1:3,8:11:24.04:246,24,0	1/1:3,19:22:33.52:408,34,0	1/1:4,19:23:56.25:537,56,0	1/1:6,13:17:37.34:366,37,0	1/1:6,7:13:21.71:257,22,0
chr10	17722996	.	TG	T	3993.46	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=13.719;DP=525;FS=20.947;HRun=1;HaplotypeScore=127.9580;InbreedingCoeff=0.9794;MQ=65.12;MQ0=5;MQRankSum=-11.579;QD=11.41;ReadPosRankSum=2.632;VQSLOD=0.8093;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,1:13:21.25:97,21,0	1/1:14,1:15:40.03:206,40,0	0/0:27,0:18:38.54:0,39,380	0/0:27,0:18:10.01:0,10,287	1/1:21,1:22:44.82:207,45,0	1/1:12,0:11:31.67:169,32,0	1/1:9,0:9:22.80:113,23,0	0/0:32,0:32:84.99:0,85,1031	1/1:15,0:14:30.38:148,30,0	1/1:25,0:25:57.40:284,57,0	1/1:20,0:20:52.39:296,52,0	1/1:15,2:17:43.92:220,44,0	1/1:7,1:6:13.93:70,14,0	1/1:6,0:6:17.33:99,17,0	1/1:20,1:21:47.65:219,48,0	1/1:9,1:10:24.05:115,24,0	1/1:12,0:12:32.03:191,32,0	1/1:7,0:6:16.65:88,17,0	0/0:27,0:27:80.99:0,81,913	0/0:41,0:41:99:0,117,1453	0/0:21,0:21:60.10:0,60,714	1/1:19,1:19:33.17:164,33,0	1/1:22,0:20:44.96:237,45,0	1/1:11,1:12:33.51:174,34,0	1/1:25,0:25:54.86:261,55,0	1/1:24,1:23:51.94:258,52,0	1/1:17,2:17:44.33:225,44,0	1/1:13,0:13:22.60:153,23,0
chr10	17723000	.	T	TTTTTG	14086.67	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=8.801;DP=535;FS=32.239;HRun=0;HaplotypeScore=130.2767;InbreedingCoeff=0.9594;MQ=64.17;MQ0=5;MQRankSum=-11.178;QD=40.02;ReadPosRankSum=1.028;VQSLOD=2.9395;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,1:14:14.98:248,15,0	1/1:7,8:15:32.11:711,32,0	0/0:31,0:19:19.24:0,19,296	0/0:32,0:23:9.63:0,10,343	1/1:11,12:24:49.37:1041,49,0	1/1:5,8:12:33.09:728,33,0	1/1:7,3:10:15.05:358,15,0	0/0:30,0:30:48.13:0,48,786	1/1:7,6:12:30.09:708,30,0	1/1:16,9:24:48.16:1084,48,0	1/1:12,9:21:36.44:849,36,0	1/1:9,8:17:31.87:729,32,0	1/1:6,3:7:12.02:263,12,0	1/1:4,2:6:15.94:335,16,0	1/1:11,8:19:42.93:853,43,0	1/1:6,3:10:10.85:244,11,0	1/1:11,3:14:30.04:486,30,0	1/1:6,1:6:15.01:226,15,0	0/0:25,0:25:48.14:0,48,801	0/0:43,0:43:96.33:0,96,1783	0/0:22,0:22:48.11:0,48,795	1/1:12,7:19:30.09:695,30,0	1/1:15,5:19:39.12:806,39,0	1/1:11,1:12:18.06:309,18,0	1/1:13,12:25:50.86:1126,51,0	1/1:16,8:22:37.37:890,37,0	1/1:12,7:17:37.65:808,38,0	1/1:6,6:13:23.80:591,24,0
chr10	17723235	.	CT	C	6504.66	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=14.718;DP=542;FS=28.618;HRun=1;HaplotypeScore=135.3853;InbreedingCoeff=0.9805;MQ=77.84;MQ0=0;MQRankSum=-5.083;QD=16.72;ReadPosRankSum=5.853;VQSLOD=3.3962;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:30,11:41:84.42:651,84,0	1/1:3,2:5:8.45:26,8,0	0/0:16,0:16:24.20:0,24,580	0/0:17,0:17:39.50:0,40,588	1/1:10,3:13:24.13:161,24,0	1/1:8,5:13:23.11:155,23,0	1/1:14,2:16:35.06:318,35,0	0/0:30,0:30:90.28:0,90,1375	1/1:11,0:11:26.29:181,26,0	1/1:18,4:22:54.75:446,55,0	1/1:10,3:13:27.90:199,28,0	1/1:16,4:20:43.13:231,43,0	1/1:9,2:11:27.05:209,27,0	1/1:14,1:15:40.21:348,40,0	1/1:19,1:20:46.19:338,46,0	1/1:13,0:13:27.83:219,28,0	1/1:28,8:36:90.21:696,90,0	1/1:16,4:20:54.46:424,54,0	0/0:35,0:35:99:0,102,1607	0/0:17,0:17:51.16:0,51,792	0/0:38,0:38:99:0,111,1727	1/1:15,3:18:37.20:287,37,0	1/1:9,4:13:25.81:162,26,0	1/1:26,6:32:58.15:477,58,0	1/1:10,4:14:23.46:162,23,0	1/1:15,4:19:48.57:388,49,0	1/1:16,3:19:45.96:320,46,0	1/1:5,0:5:14.72:109,15,0
chr10	17723238	.	G	GT	8708.92	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=14.610;DP=535;FS=23.661;HRun=0;HaplotypeScore=129.7100;InbreedingCoeff=0.9876;MQ=74.98;MQ0=0;MQRankSum=-4.688;QD=22.33;ReadPosRankSum=5.377;VQSLOD=3.7215;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:29,12:41:97.49:875,97,0	1/1:3,2:5:11.06:50,11,0	0/0:16,0:16:39.03:0,39,480	0/0:14,0:14:36.09:0,36,460	1/1:10,3:13:28.40:221,28,0	1/1:8,5:13:26:210,26,0	1/1:14,2:16:35.84:402,36,0	0/0:26,0:26:78.26:0,78,1091	1/1:11,1:12:28.95:257,29,0	1/1:16,5:21:56.67:593,57,0	1/1:10,3:13:28.80:228,29,0	1/1:16,4:20:55.60:370,56,0	1/1:8,3:11:26.01:234,26,0	1/1:12,2:14:38.58:401,39,0	1/1:18,2:20:51.72:462,52,0	1/1:11,1:12:26.48:261,26,0	1/1:27,9:36:94.89:929,95,0	1/1:16,5:21:59.63:601,60,0	0/0:34,0:34:99:0,102,1406	0/0:17,0:17:51.17:0,51,713	0/0:38,0:38:99:0,111,1547	1/1:14,3:17:38.08:361,38,0	1/1:12,4:16:31.25:249,31,0	1/1:26,6:32:73.77:715,74,0	1/1:10,4:14:29.09:240,29,0	1/1:16,4:20:53.51:531,54,0	1/1:15,3:18:46.76:381,47,0	1/1:5,0:5:14.97:139,15,0
chr10	17723566	.	GCCC	G	11553.36	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=6.186;DP=635;FS=3.246;HRun=10;HaplotypeScore=120.4739;InbreedingCoeff=0.9924;MQ=72.15;MQ0=0;MQRankSum=-2.030;QD=32.27;ReadPosRankSum=5.225;VQSLOD=3.8410;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:72.23:0,72,1363	1/1:1,6:7:15.05:205,15,0	0/0:13,0:13:18.36:0,18,340	0/0:16,0:16:36.11:0,36,601	1/1:2,30:32:60.17:819,60,0	1/1:1,25:26:66.21:901,66,0	1/1:3,17:20:39.12:532,39,0	0/0:7,0:21:41.86:0,42,346	1/1:2,30:32:84.27:1146,84,0	1/1:1,30:31:87.29:1186,87,0	1/1:3,19:22:42.13:573,42,0	0/0:18,0:20:60.15:0,60,1072	0/0:15,0:15:42.14:0,42,847	0/0:22,0:23:63.19:0,63,1215	1/1:1,26:27:72.24:983,72,0	1/1:5,23:28:54.62:738,55,0	1/1:1,30:31:78.25:1065,78,0	1/1:1,19:20:45.78:651,46,0	0/0:2,0:23:65.76:0,66,514	0/0:5,0:14:35.90:0,36,297	0/0:12,0:50:99:0,116,946	0/0:20,0:20:39.13:0,39,791	0/0:15,0:16:36.99:0,37,663	0/0:14,0:14:39.13:0,39,794	1/1:0,17:17:39.13:532,39,0	1/1:4,28:32:84.23:1124,84,0	1/1:1,28:29:72.09:957,72,0	1/1:0,4:4:12:143,12,0
chr10	17724675	.	G	GACCCAGCATCATTTGTTAAGGACACA	53777.60	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=2.564;DP=495;FS=5.306;HRun=0;HaplotypeScore=285.9759;InbreedingCoeff=0.9740;MQ=81.72;MQ0=0;MQRankSum=-15.691;QD=242.24;ReadPosRankSum=3.722;VQSLOD=4.4965;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:34:96.33:0,96,5865	1/1:5,3:8:24.08:2650,24,0	0/0:18,0:18:50.61:0,51,2179	0/0:18,0:18:33.13:0,33,2114	1/1:16,9:26:66.23:5490,66,0	1/1:16,4:20:57.15:4899,57,0	1/1:10,0:10:24.07:1652,24,0	0/0:29,0:29:84.27:0,84,4442	1/1:9,2:11:30.10:2327,30,0	1/1:12,3:17:48.16:4498,48,0	1/1:5,3:10:27.09:2279,27,0	0/0:17,0:17:51.13:0,51,3004	0/0:17,0:17:51.18:0,51,3101	0/0:20,0:20:60.19:0,60,3528	1/1:10,3:18:26.57:3349,27,0	1/1:9,4:16:39.13:4428,39,0	1/1:5,2:12:18.06:2116,18,0	1/1:2,0:2:3.01:372,3,0	0/0:13,0:13:39.12:0,39,1813	0/0:18,0:18:54.17:0,54,3115	0/0:25,0:25:69.21:0,69,3993	0/0:20,0:20:57.20:0,57,3771	0/0:18,0:18:54.17:0,54,3161	0/0:25,0:25:72.20:0,72,4536	1/1:8,7:17:45.15:4312,45,0	1/1:15,4:20:55.75:5279,56,0	1/1:16,8:25:68.86:6775,69,0	1/1:6,4:10:30.10:3352,30,0
chr10	17724769	.	ATTAT	A	9800.28	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=11.998;DP=472;FS=31.436;HRun=0;HaplotypeScore=144.4950;InbreedingCoeff=0.9816;MQ=73.72;MQ0=0;MQRankSum=-12.110;QD=41.88;ReadPosRankSum=0.245;VQSLOD=3.1237;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:84.29:0,84,2201	1/1:1,6:7:18.06:336,18,0	0/0:21,0:21:50.54:0,51,1318	0/0:21,0:18:39.59:0,40,923	1/1:3,24:27:66.04:1090,66,0	1/1:2,14:16:36.12:666,36,0	1/1:5,12:17:33.11:564,33,0	0/0:28,0:28:75.26:0,75,1997	1/1:1,18:19:51.17:967,51,0	1/1:8,15:23:60.16:1061,60,0	1/1:3,8:11:24.08:427,24,0	0/0:15,0:15:42.14:0,42,1122	0/0:11,0:11:30.10:0,30,802	0/0:11,0:11:27.09:0,27,720	1/1:9,10:19:36.12:650,36,0	1/1:6,17:23:51.17:916,51,0	1/1:3,7:10:24.08:450,24,0	1/1:2,5:6:9.03:171,9,0	0/0:23,0:23:69.20:0,69,1742	0/0:9,0:8:24.08:0,24,535	0/0:20,0:20:44.70:0,45,1180	0/0:11,0:11:30.10:0,30,784	0/0:12,0:12:36.12:0,36,953	0/0:24,0:24:57.17:0,57,1465	1/1:2,16:18:45.15:839,45,0	1/1:5,16:20:54.17:981,54,0	1/1:3,9:12:27.09:512,27,0	1/1:1,3:4:9.03:170,9,0
chr10	17724780	.	C	CCG	3039.64	PASS	AB=1.000;AC=31;AF=0.554;AN=56;BaseQRankSum=13.951;DP=428;FS=33.585;HRun=0;HaplotypeScore=154.1579;InbreedingCoeff=0.8709;MQ=65.45;MQ0=3;MQRankSum=-12.390;QD=14.68;ReadPosRankSum=1.481;VQSLOD=1.7384;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:57.15:0,57,878	1/1:5,1:6:17.38:114,17,0	0/0:19,0:18:49.96:0,50,742	0/0:19,0:13:25.94:0,26,386	1/1:20,5:25:54.65:364,55,0	1/1:12,4:16:37.77:279,38,0	1/1:8,4:12:33.84:258,34,0	0/0:30,0:29:76.24:0,76,1137	1/1:17,0:17:44.71:216,45,0	1/1:10,6:16:43.46:336,43,0	1/1:5,2:8:17.62:139,18,0	0/0:16,0:16:39.04:0,39,550	0/0:11,0:11:27.03:0,27,370	0/0:13,0:13:14.91:0,15,181	1/1:12,0:12:25.78:131,26,0	1/1:15,5:19:43.46:331,43,0	1/1:7,3:10:20.52:178,21,0	1/1:5,0:4:11.63:64,12,0	0/0:22,0:22:57.46:0,57,917	0/0:6,0:5:9.03:0,9,138	0/0:21,0:21:35.89:0,36,586	0/1:11,0:11:19.96:20,0,260	0/0:12,0:12:3.10:0,3,276	0/0:22,0:22:30.04:0,30,459	1/1:11,6:17:40.96:337,41,0	1/1:15,3:16:41.92:247,42,0	1/1:9,2:11:28.15:191,28,0	1/1:2,1:3:5.91:56,6,0
chr10	17724782	.	C	CTGTGTGTGTGTG	7793.35	PASS	AB=1.000;AC=50;AF=0.926;AN=54;BaseQRankSum=-1.103;DP=543;FS=2.041;HRun=0;HaplotypeScore=290.1563;InbreedingCoeff=0.2728;MQ=58.35;MQ0=3;MQRankSum=-1.415;QD=15.49;ReadPosRankSum=2.154;VQSLOD=3.3395;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:42,0:42:9.50:349,10,0	1/1:7,0:7:6.02:119,6,0	./.	0/0:20,0:14:2.97:0,3,20	1/1:32,0:32:8.93:333,9,0	1/1:16,0:16:15:185,15,0	1/1:14,0:14:18.03:196,18,0	1/1:30,0:29:32.59:808,33,0	1/1:18,0:18:0.47:1,0,0	1/1:25,0:24:44.98:989,45,0	1/1:20,0:19:21.01:444,21,0	1/1:19,3:22:8.91:523,9,0	1/1:10,0:15:6.63:225,7,0	1/1:17,0:20:11.72:355,12,0	1/1:14,0:14:6.01:117,6,0	1/1:26,0:25:21.02:226,21,0	0/1:12,0:12:3.53:280,0,4	1/1:6,0:5:3.01:94,3,0	1/1:24,0:24:27:686,27,0	1/1:12,0:11:5.90:180,6,0	0/1:24,0:23:0:0,0,0	1/1:13,0:13:12.04:254,12,0	1/1:22,0:22:3:65,3,0	1/1:24,4:29:3.82:326,4,0	1/1:21,0:21:21.02:205,21,0	1/1:21,0:19:18.06:445,18,0	1/1:14,0:14:15.52:319,16,0	1/1:3,0:3:3.01:69,3,0
chr10	17724790	.	G	GTGTGTT	4589.27	PASS	AB=0.943;AC=21;AF=0.375;AN=56;BaseQRankSum=2.438;DP=566;FS=2.659;HRun=0;HaplotypeScore=211.9458;InbreedingCoeff=-0.5814;MQ=46.16;MQ0=4;MQRankSum=-2.993;QD=10.62;ReadPosRankSum=5.075;VQSLOD=3.9388;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:39,0:38:27.46:27,0,202	0/1:10,1:11:31.66:111,0,32	0/0:16,0:12:19.81:0,20,243	0/0:19,0:11:14.04:0,14,152	0/1:31,4:35:99:505,0,137	0/1:18,0:18:50.48:287,0,50	0/1:17,0:17:16.23:288,0,16	0/0:29,0:28:69.35:0,69,535	0/0:20,0:20:42.76:0,43,253	0/1:21,5:26:99:647,0,102	0/1:18,2:20:13.48:317,0,13	0/1:22,0:22:99:144,0,163	0/1:15,0:15:63.71:128,0,64	0/1:22,0:22:71.72:103,0,72	0/0:16,0:16:27.13:0,27,140	0/1:27,0:26:87.15:294,0,87	0/1:12,3:15:21.15:319,0,21	0/0:9,0:7:20.46:0,20,126	0/1:24,0:24:79.93:80,0,286	0/1:11,0:10:19.38:33,0,19	0/0:25,0:24:23.56:0,24,192	0/1:12,0:12:50.86:142,0,51	0/1:17,0:17:19.81:34,0,20	0/1:34,0:34:82.96:83,0,228	0/1:21,0:21:82.67:357,0,83	0/1:22,3:23:99:310,0,127	0/1:15,2:17:30.96:300,0,31	0/1:1,1:2:9.25:81,0,9
chr10	17724792	.	G	GTGTT	2974.43	PASS	AB=0.967;AC=23;AF=0.411;AN=56;BaseQRankSum=3.847;DP=560;FS=3.922;HRun=0;HaplotypeScore=195.8550;InbreedingCoeff=-0.5472;MQ=43.37;MQ0=4;MQRankSum=-4.518;QD=6.92;ReadPosRankSum=4.489;VQSLOD=2.6203;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:38,0:37:1.56:2,0,203	0/1:9,0:9:46.49:82,0,46	0/0:16,0:10:19.81:0,20,244	0/0:19,0:10:14.05:0,14,152	0/1:36,1:37:99:206,0,247	0/1:14,3:17:41.55:355,0,42	1/1:11,4:16:3.89:402,4,0	0/0:28,0:27:72.38:0,72,562	0/0:20,0:20:42.71:0,43,253	0/1:26,1:26:99:263,0,176	0/1:21,0:20:86.77:135,0,87	0/1:22,0:22:64.71:65,0,180	0/1:14,0:14:63.71:102,0,64	0/1:22,0:22:51.73:52,0,71	0/1:15,1:16:77.70:78,0,88	0/1:24,5:28:55.36:426,0,55	0/1:14,0:14:94.27:94,0,96	0/1:8,0:7:14.34:14,0,66	0/0:23,0:23:10.99:0,11,304	0/1:11,0:10:17.95:34,0,18	0/0:24,0:23:23.56:0,24,193	0/1:12,0:12:50.88:116,0,51	0/1:17,0:17:19.02:38,0,19	0/1:33,0:33:24.58:25,0,272	0/1:17,5:22:66.30:420,0,66	0/1:26,0:24:71.08:71,0,218	0/1:16,0:16:99:118,0,129	0/1:2,0:2:9.25:35,0,9
chr10	17725058	.	CATCT	C	4110.55	PASS	AB=0.836;AC=24;AF=0.444;AN=54;BaseQRankSum=11.316;DP=624;FS=3.705;HRun=0;HaplotypeScore=106.5232;InbreedingCoeff=0.7666;MQ=68.04;MQ0=4;MQRankSum=-0.161;QD=14.63;ReadPosRankSum=0.668;VQSLOD=3.1354;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:12,7:19:26.49:216,0,26	1/1:1,7:8:21.07:325,21,0	./.	0/0:19,0:15:0:0,0,0	1/1:11,20:31:33.07:465,33,0	0/0:21,0:21:54.19:0,54,1267	0/1:15,1:16:22.29:22,0,469	1/1:33,0:33:5.95:42,6,0	0/0:24,0:24:42.14:0,42,983	1/1:11,16:27:42.13:611,42,0	1/1:13,10:23:15.01:205,15,0	1/1:6,7:13:12.04:186,12,0	1/1:11,16:27:33.02:510,33,0	0/0:22,0:22:42.13:0,42,940	0/0:21,0:21:42.14:0,42,975	0/0:21,0:21:21.07:0,21,492	1/1:7,14:20:15.05:232,15,0	0/0:32,0:32:57.53:0,58,1228	0/0:16,0:18:9.03:0,9,151	0/0:26,0:26:36.11:0,36,778	0/0:26,0:26:42.14:0,42,952	0/0:20,0:20:36.12:0,36,843	0/0:22,0:22:39.13:0,39,857	0/0:13,0:13:9.03:0,9,211	0/0:30,1:31:14.47:0,14,1212	1/1:9,18:27:41.93:649,42,0	1/1:14,15:29:36.12:557,36,0	1/1:7,0:7:6.02:90,6,0
chr10	17726236	.	CTCCTCCCACTTCACAAGGCTCCTCCCACTTCACACAAGG	C	2004.40	PASS	AB=0.974;AC=16;AF=0.286;AN=56;BaseQRankSum=7.772;DP=608;FS=5.036;HRun=0;HaplotypeScore=583.4749;InbreedingCoeff=-0.2557;MQ=64.26;MQ0=2;MQRankSum=-10.097;QD=7.45;ReadPosRankSum=4.821;VQSLOD=-0.3196;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,123,5818	0/1:10,0:10:99:152,0,272	0/0:31,0:26:54.95:0,55,908	0/0:32,0:29:59.50:0,60,1526	0/1:17,0:16:99:176,0,277	0/1:21,0:21:99:264,0,225	0/1:23,0:20:64.01:64,0,199	0/0:23,0:23:54.16:0,54,1553	0/1:20,0:20:97.01:97,0,724	0/1:8,10:15:99:230,0,139	0/1:9,0:9:2.07:2,0,268	0/0:26,0:26:69.24:0,69,3960	0/0:23,0:23:66.23:0,66,3846	0/0:27,0:27:72.22:0,72,3785	0/1:22,0:21:99:258,0,376	0/1:19,0:19:99:124,0,526	0/1:19,0:19:99:158,0,386	0/1:26,0:26:99:174,0,609	0/0:21,0:20:54.11:0,54,1681	0/0:9,0:9:24.08:0,24,1142	0/0:41,0:41:99:0,114,5239	0/0:18,0:18:51.13:0,51,2249	0/0:16,0:16:39.13:0,39,2017	0/0:26,0:26:66.21:0,66,3535	0/1:16,0:14:38.70:39,0,436	0/1:22,0:20:99:252,0,669	0/1:24,0:23:99:141,0,758	1/1:3,0:3:2.98:31,3,0
chr10	17727067	.	G	GGTGTGTGTGTGT	16758.57	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=5.695;DP=727;FS=3.177;HRun=0;HaplotypeScore=231.4249;InbreedingCoeff=0.9871;MQ=60.33;MQ0=13;MQRankSum=-13.958;QD=52.87;ReadPosRankSum=-1.909;VQSLOD=4.1921;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:49:47.65:0,48,3977	1/1:4,0:8:9.03:371,9,0	0/0:54,0:18:30.82:0,31,537	0/0:53,0:21:29.15:0,29,355	1/1:10,14:26:27.09:1303,27,0	1/1:4,0:20:36.12:924,36,0	1/1:14,0:38:66.23:1636,66,0	0/0:29,0:29:51.16:0,51,1475	1/1:19,0:19:33.11:1071,33,0	1/1:16,12:32:69.24:2407,69,0	1/1:5,17:22:18.06:918,18,0	0/0:19,0:21:48.16:0,48,1466	0/0:14,0:15:30.09:0,30,955	0/0:25,0:25:63.17:0,63,1724	1/1:6,0:17:24.08:544,24,0	1/1:5,0:13:15.05:385,15,0	1/1:17,1:23:24.08:1295,24,0	1/1:4,0:16:24.08:658,24,0	0/0:18,0:19:42.12:0,42,1207	0/0:31,0:32:75.26:0,75,2490	0/0:39,0:43:99:0,102,2669	0/0:24,0:24:57.11:0,57,1611	0/0:16,0:18:27.09:0,27,774	0/0:27,0:27:55.49:0,55,2145	1/1:3,0:17:27.09:617,27,0	1/1:7,12:22:43.33:1360,43,0	1/1:12,12:26:36.59:1861,37,0	1/1:5,5:12:27.09:1408,27,0
chr10	17727085	.	T	TG	1580.94	PASS	AB=0.958;AC=15;AF=0.268;AN=56;BaseQRankSum=15.501;DP=717;FS=0.379;HRun=1;HaplotypeScore=145.7027;InbreedingCoeff=-0.0130;MQ=60.68;MQ0=13;MQRankSum=-14.321;QD=7.00;ReadPosRankSum=-0.426;VQSLOD=0.2779;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:56:99:0,115,2110	0/1:8,0:8:17.91:18,0,86	0/0:71,0:24:46.17:0,46,616	0/0:66,0:22:36.90:0,37,421	0/1:16,0:15:85.35:215,0,85	0/1:20,0:20:99:177,0,172	0/1:38,0:38:99:196,0,268	0/0:28,0:28:81.25:0,81,1085	1/1:8,10:19:12.32:408,12,0	0/1:23,4:24:68.21:68,0,519	0/1:13,0:13:99:131,0,99	0/0:19,0:19:57.08:0,57,745	0/0:14,0:14:39.06:0,39,499	0/0:24,0:24:72.24:0,72,1000	0/1:15,1:17:91.56:131,0,92	0/1:12,0:12:35.95:36,0,87	0/0:21,1:20:34.40:0,34,425	0/1:14,0:14:18.43:53,0,18	0/0:20,0:20:60.12:0,60,762	0/0:30,0:30:90.25:0,90,1226	0/0:55,0:55:99:0,150,1985	0/0:29,0:29:87.23:0,87,1149	0/0:15,0:15:37.03:0,37,487	0/0:29,1:30:33.54:0,34,1015	1/1:13,0:13:22.26:151,22,0	0/0:11,0:11:8.67:0,9,206	0/1:15,1:18:85.28:85,0,146	0/1:10,0:11:72.05:81,0,72
chr10	17727702	.	ATTT	A	9223.17	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=14.410;DP=552;FS=1.889;HRun=10;HaplotypeScore=82.3917;InbreedingCoeff=0.9933;MQ=76.92;MQ0=0;MQRankSum=-2.125;QD=32.71;ReadPosRankSum=4.731;VQSLOD=4.3085;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,105,2086	1/1:1,9:10:27.09:369,27,0	0/0:13,0:13:12.02:0,12,162	0/0:10,0:11:18.06:0,18,281	1/1:1,21:22:57.10:736,57,0	1/1:1,16:17:45.14:614,45,0	1/1:3,13:15:30.08:404,30,0	0/0:21,0:21:57.20:0,57,1182	1/1:2,16:18:48.07:613,48,0	1/1:1,27:28:78.26:1065,78,0	1/1:0,14:14:36.07:470,36,0	0/0:20,0:20:60.21:0,60,1229	0/0:26,0:26:75.26:0,75,1532	0/0:19,0:19:54.19:0,54,1120	1/1:2,17:19:42.13:573,42,0	1/1:2,22:24:54.18:737,54,0	1/1:2,16:18:42.14:573,42,0	1/1:2,22:24:48.15:655,48,0	0/0:25,0:26:75.23:0,75,1480	0/0:20,0:20:57.20:0,57,1182	0/0:16,0:16:48.16:0,48,966	0/0:23,0:23:69.24:0,69,1402	0/0:25,0:26:78.25:0,78,1576	0/0:13,0:13:36.12:0,36,717	1/1:0,17:17:45.15:614,45,0	1/1:3,17:20:51.15:695,51,0	1/1:6,23:29:63.19:860,63,0	1/1:0,6:6:18.06:246,18,0
chr10	17727924	.	GA	G	6716.49	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=10.681;DP=590;FS=4.932;HRun=9;HaplotypeScore=57.6434;InbreedingCoeff=0.9864;MQ=65.68;MQ0=9;MQRankSum=0.409;QD=22.69;ReadPosRankSum=4.881;VQSLOD=5.5628;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,120,1344	1/1:1,10:11:24.01:220,24,0	0/0:14,0:13:28.60:0,29,354	0/0:7,0:6:15.01:0,15,153	1/1:5,22:27:66.03:601,66,0	1/1:0,15:15:36.02:329,36,0	1/1:4,15:16:45.02:412,45,0	0/0:20,0:19:48.13:0,48,546	1/1:1,13:14:39.02:357,39,0	1/1:4,16:19:45.01:412,45,0	1/1:2,9:10:27.01:247,27,0	0/0:23,0:23:61.03:0,61,668	0/0:18,0:18:45.12:0,45,510	0/0:17,0:17:45.12:0,45,511	1/1:1,18:18:51.03:467,51,0	1/1:3,26:29:75.04:686,75,0	1/1:2,31:33:87.04:796,87,0	1/1:3,16:19:45.01:412,45,0	0/0:18,0:17:42.12:0,42,476	0/0:30,0:30:72.21:0,72,831	0/0:41,1:41:80.79:0,81,1142	0/0:18,0:18:45.13:0,45,516	0/0:12,1:13:8.64:0,9,350	0/0:31,1:32:53.77:0,54,863	1/1:2,23:25:57.03:522,57,0	1/1:2,25:27:69.01:625,69,0	1/1:2,19:21:54.02:494,54,0	1/1:1,5:6:15.01:137,15,0
chr10	17728646	.	C	CT	2145.01	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=6.253;DP=429;FS=1.056;HRun=2;HaplotypeScore=68.6603;InbreedingCoeff=0.8370;MQ=81.16;MQ0=2;MQRankSum=-4.008;QD=11.23;ReadPosRankSum=2.170;VQSLOD=2.0111;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:31.69:0,32,196	1/1:7,0:7:8.93:76,9,0	0/0:26,0:18:31.69:0,32,270	0/0:15,0:15:10.67:0,11,77	1/1:7,13:21:19.78:148,20,0	1/1:1,13:14:3.01:32,3,0	1/1:5,0:5:11.91:93,12,0	0/0:29,0:29:65.34:0,65,639	1/1:11,16:27:77.98:746,78,0	1/1:3,12:15:23.97:216,24,0	1/1:7,1:8:11.92:103,12,0	0/0:16,0:16:23.94:0,24,170	0/0:22,0:22:14.98:0,15,92	0/0:14,0:14:19.84:0,20,125	1/1:12,0:12:29.85:229,30,0	1/1:1,11:12:3.01:34,3,0	1/1:12,0:12:3.01:34,3,0	1/1:7,0:7:3:26,3,0	0/0:17,0:17:40.30:0,40,399	0/0:19,0:19:51:0,51,529	0/0:8,0:8:8.80:0,9,77	0/0:14,0:14:33.44:0,33,232	0/0:20,0:20:26.66:0,27,191	0/0:18,0:17:21.75:0,22,141	1/1:16,0:16:3:29,3,0	1/1:14,0:14:29.99:258,30,0	1/1:17,0:17:38.44:268,38,0	1/1:4,0:4:8.94:66,9,0
chr10	17728648	.	T	TTAAA	8992.46	PASS	AB=0.659;AC=37;AF=0.661;AN=56;BaseQRankSum=9.280;DP=549;FS=42.285;HRun=0;HaplotypeScore=153.8316;InbreedingCoeff=0.4208;MQ=71.77;MQ0=2;MQRankSum=-8.403;QD=20.62;ReadPosRankSum=-3.388;VQSLOD=2.5709;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:7,0:26:45.30:45,0,161	1/1:1,0:9:11.96:202,12,0	0/0:27,0:18:33.06:0,33,336	0/0:12,0:14:16.57:0,17,124	1/1:25,0:25:52.41:658,52,0	1/1:19,0:19:21.07:340,21,0	1/1:8,0:8:22.50:314,22,0	0/0:24,0:26:68.79:0,69,793	1/1:28,0:28:78.04:1375,78,0	1/1:22,0:21:51.06:734,51,0	1/1:19,0:18:53.95:686,54,0	0/1:11,0:26:99:175,0,104	0/1:6,0:26:77.20:111,0,77	0/1:18,0:17:45.11:330,0,45	1/1:17,0:17:45.78:447,46,0	1/1:16,0:16:23.11:352,23,0	1/1:8,10:18:24.97:420,25,0	1/1:9,0:15:28.61:489,29,0	0/0:16,0:17:41.83:0,42,514	0/0:21,0:21:50.70:0,51,764	0/0:3,0:8:11.08:0,11,120	0/1:7,0:20:99:156,0,163	0/1:10,0:26:99:131,0,138	0/1:7,0:21:31:31,0,89	1/1:11,0:26:36.12:556,36,0	1/1:8,0:26:64.78:879,65,0	1/1:21,0:21:54.42:495,54,0	1/1:3,0:3:8.94:66,9,0
chr10	17728654	.	A	AAAAG	1290.84	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=9.433;DP=523;FS=4.440;HRun=0;HaplotypeScore=99.7995;InbreedingCoeff=-0.1983;MQ=66.92;MQ0=2;MQRankSum=0.725;QD=4.47;ReadPosRankSum=4.182;VQSLOD=1.6012;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:23:5.29:5,0,77	0/1:8,0:8:28.45:44,0,28	0/0:25,0:16:35.67:0,36,379	0/0:11,0:11:12.04:0,12,107	0/1:26,0:26:65.39:65,0,107	0/1:17,0:17:7.69:8,0,82	0/0:9,0:9:9.53:0,10,140	0/0:25,0:25:66.01:0,66,720	1/1:8,16:28:35.84:978,36,0	0/1:21,0:20:38.49:38,0,205	0/1:20,0:19:9.61:10,0,219	0/0:25,0:25:0.24:0,0,158	0/1:26,0:26:37.81:38,0,113	0/1:18,0:17:52.87:53,0,122	0/0:13,0:13:29.52:0,30,191	0/1:14,0:14:0.87:1,0,139	0/0:18,0:18:1.91:0,2,167	0/0:16,0:16:11.31:0,11,167	0/0:19,0:19:48.03:0,48,550	0/0:22,0:22:66.13:0,66,872	0/0:6,0:6:8.92:0,9,78	0/1:17,0:17:69.46:69,0,105	0/1:27,0:27:8.71:9,0,247	0/1:24,0:24:6.83:7,0,52	0/0:24,0:24:7.57:0,8,181	0/1:20,0:20:99:116,0,142	0/0:19,0:19:53.28:0,53,357	0/0:2,0:2:5.95:0,6,42
chr10	17731577	.	CGT	C	5861.50	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=8.337;DP=1015;FS=0.000;HRun=0;HaplotypeScore=136.1810;InbreedingCoeff=0.9995;MQ=58.96;MQ0=9;MQRankSum=0.216;QD=28.05;ReadPosRankSum=0.597;VQSLOD=5.8956;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,99,1571	0/0:15,0:15:45.14:0,45,727	0/0:43,0:20:57.97:0,58,865	0/0:31,0:14:29.59:0,30,449	0/0:22,0:22:60.20:0,60,991	0/0:7,0:29:56.07:0,56,531	0/0:7,0:54:96.05:0,96,866	1/1:7,30:37:78.14:969,78,0	0/0:42,0:42:99:0,110,1806	0/0:47,0:47:99:0,126,2034	0/0:18,0:18:45.15:0,45,761	0/0:47,0:47:99:0,123,1960	0/0:33,0:33:93.31:0,93,1534	0/0:32,0:32:81.28:0,81,1369	0/0:6,0:24:57:0,57,499	0/0:5,0:22:45.02:0,45,423	0/0:52,2:54:99:0,108,2326	0/0:0,0:34:84.05:0,84,750	1/1:5,16:19:42.04:527,42,0	1/1:4,27:31:72.23:936,72,0	1/1:7,113:120:99:3430,265,0	0/0:23,0:23:63.19:0,63,1003	0/0:33,0:33:90.24:0,90,1397	0/0:62,0:62:99:0,175,2870	0/0:8,0:33:63.02:0,63,558	0/0:35,0:35:95.84:0,96,1615	0/0:23,0:23:60.17:0,60,951	0/0:9,0:9:27.09:0,27,447
chr10	17732205	.	A	AC	25342.76	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-15.697;DP=759;FS=19.098;HRun=1;HaplotypeScore=70.8292;InbreedingCoeff=0.9996;MQ=82.02;MQ0=1;MQRankSum=-4.539;QD=43.47;ReadPosRankSum=5.637;VQSLOD=2.7641;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,43:43:99:2014,126,0	1/1:0,11:11:29.57:479,30,0	0/0:19,0:19:27.71:0,28,544	0/0:21,0:21:60.15:0,60,758	1/1:0,29:29:72.25:1151,72,0	1/1:1,14:14:42.14:671,42,0	1/1:1,25:25:72.25:1151,72,0	0/0:28,0:28:75.24:0,75,1032	1/1:0,28:28:78.27:1246,78,0	1/1:0,26:26:75.26:1198,75,0	1/1:0,13:13:36.12:575,36,0	1/1:0,27:27:78.27:1247,78,0	1/1:1,35:35:93.32:1486,93,0	1/1:1,28:30:78.27:1238,78,0	1/1:0,40:40:99:1774,111,0	1/1:1,30:31:84.29:1343,84,0	1/1:1,38:39:96.33:1535,96,0	1/1:0,30:30:81.28:1295,81,0	0/0:23,0:23:66.18:0,66,901	0/0:16,0:16:42.13:0,42,570	0/0:69,0:69:99:0,202,2728	1/1:1,19:20:51.17:812,51,0	1/1:0,20:20:47.63:766,48,0	1/1:0,43:43:99:1918,120,0	1/1:0,19:19:57.19:911,57,0	1/1:0,24:24:69.23:1093,69,0	1/1:0,19:19:54.18:863,54,0	1/1:0,14:14:36.12:575,36,0
chr10	17732705	.	TTG	T	1688.90	PASS	AB=1.000;AC=9;AF=0.205;AN=44;BaseQRankSum=-0.553;DP=532;FS=0.000;HRun=0;HaplotypeScore=103.2361;InbreedingCoeff=0.7438;MQ=56.88;MQ0=1;MQRankSum=5.193;QD=16.24;ReadPosRankSum=2.351;VQSLOD=3.2666;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:23.95:0,24,230	0/0:7,0:6:3:0,3,26	0/0:22,0:17:22.69:0,23,267	0/0:13,0:9:14.69:0,15,155	./.	./.	0/0:32,0:32:21.01:0,21,207	1/1:7,11:18:33.10:391,33,0	./.	0/0:15,0:15:35.14:0,35,335	./.	0/0:24,0:23:9:0,9,78	0/0:11,0:10:6.01:0,6,61	./.	./.	0/0:26,0:26:12.02:0,12,133	0/0:22,0:27:27.04:0,27,302	0/0:16,0:15:21.47:0,21,227	1/1:12,7:19:21.06:249,21,0	1/1:1,7:8:21.06:249,21,0	1/1:17,30:50:86.59:945,87,0	0/0:15,0:15:2.96:0,3,26	0/1:9,0:9:0:0,0,0	0/0:32,0:32:5.78:0,6,50	0/0:21,0:21:6.02:0,6,77	0/0:21,0:25:49.23:0,49,517	0/0:19,0:23:18.03:0,18,191	0/0:12,0:13:6.01:0,6,65
chr10	17734911	.	A	ATT	4137.88	PASS	AB=0.678;AC=46;AF=0.821;AN=56;BaseQRankSum=-0.058;DP=675;FS=4.401;HRun=13;HaplotypeScore=122.4682;InbreedingCoeff=0.1622;MQ=70.11;MQ0=2;MQRankSum=-0.852;QD=6.59;ReadPosRankSum=1.135;VQSLOD=1.3309;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:32:37.66:193,38,0	0/1:4,0:11:13.45:22,0,13	0/1:29,0:11:20.65:33,0,21	0/0:27,0:17:2.48:0,2,32	1/1:20,2:42:62.64:354,63,0	0/1:8,0:26:14.19:71,0,14	0/1:8,0:22:5.18:59,0,5	1/1:21,12:41:49.42:530,49,0	0/0:18,0:20:44.37:0,44,367	1/1:22,0:34:6.45:213,6,0	1/1:5,0:17:30.26:115,30,0	1/1:13,1:18:3.23:127,3,0	1/1:19,0:22:3.87:84,4,0	1/1:18,0:20:29.45:177,29,0	1/1:8,0:19:9.98:35,10,0	0/1:10,0:27:4.74:55,0,5	1/1:6,1:28:11.62:124,12,0	1/1:4,0:22:28.10:99,28,0	1/1:14,6:21:48.01:593,48,0	1/1:9,8:21:34.93:357,35,0	1/1:2,8:11:8.95:82,9,0	1/1:21,0:24:22.04:111,22,0	1/1:13,1:16:17.82:133,18,0	1/1:22,1:27:10.73:132,11,0	1/1:4,1:24:30.92:147,31,0	1/1:6,1:27:9.21:170,9,0	0/1:11,0:28:19.07:69,0,19	1/1:4,0:15:14.97:52,15,0
chr10	17734926	.	CT	C	1483.07	PASS	AB=0.939;AC=18;AF=0.321;AN=56;BaseQRankSum=0.575;DP=655;FS=15.180;HRun=13;HaplotypeScore=95.8398;InbreedingCoeff=0.2602;MQ=68.25;MQ0=2;MQRankSum=0.460;QD=4.20;ReadPosRankSum=2.288;VQSLOD=0.4812;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:30,2:32:4.06:271,0,4	0/0:10,0:11:20.86:0,21,184	0/1:42,1:18:0.08:0,0,123	0/1:25,1:13:18.15:20,0,18	0/0:35,0:37:47.84:0,48,475	0/0:21,0:22:25.87:0,26,256	0/0:17,0:18:11.16:0,11,143	0/0:31,1:33:21.18:0,21,341	1/1:8,12:21:28.82:203,29,0	0/0:31,1:32:2.78:0,3,304	0/0:14,0:14:30.45:0,30,275	1/1:11,5:16:26.55:191,27,0	1/1:19,2:21:16.87:187,17,0	0/1:16,3:19:21.85:193,0,22	0/0:13,0:13:17.70:0,18,145	0/1:25,0:26:4.46:4,0,215	0/0:24,0:24:10.49:0,10,221	0/0:23,0:23:41.91:0,42,366	0/0:21,0:23:23.16:0,23,241	0/0:16,0:16:35.58:0,36,277	0/0:8,0:9:8.05:0,8,64	0/1:19,3:21:3.62:157,0,4	1/1:14,4:19:21.02:210,21,0	0/1:25,4:27:26.91:176,0,27	0/0:25,1:26:23.12:0,23,365	0/1:23,1:24:15.64:16,0,144	0/1:31,1:32:5.97:6,0,339	0/1:21,1:22:25.35:25,0,248
chr10	17737916	.	CTTTTCTT	C	1263.17	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=3.987;DP=382;FS=4.569;HRun=0;HaplotypeScore=95.2459;InbreedingCoeff=0.8477;MQ=76.79;MQ0=0;MQRankSum=-2.886;QD=26.32;ReadPosRankSum=-3.015;VQSLOD=2.3281;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:75.23:0,75,2555	0/0:6,0:6:15.05:0,15,555	0/0:20,0:16:0.21:0,0,670	0/0:12,0:11:12.86:0,13,225	0/0:10,0:10:27.06:0,27,759	0/0:10,0:10:27.08:0,27,766	0/0:17,0:17:45.14:0,45,1322	1/1:9,16:25:48:820,48,0	0/0:10,0:10:27.09:0,27,961	0/0:18,0:18:36.12:0,36,1239	0/0:8,0:8:15.03:0,15,468	0/0:7,0:7:15.02:0,15,383	0/0:14,0:14:35.91:0,36,1231	0/0:10,0:10:21.06:0,21,604	0/0:12,0:12:27.08:0,27,808	0/0:13,0:13:36.12:0,36,1130	0/0:24,0:24:60.16:0,60,2001	0/0:12,0:12:27.05:0,27,644	1/1:4,6:10:17.97:281,18,0	1/1:1,5:6:12.01:237,12,0	1/1:4,3:7:3.01:72,3,0	0/0:12,0:12:21.07:0,21,769	0/0:11,0:11:30.09:0,30,984	0/0:23,0:23:60.20:0,60,2219	0/0:17,0:17:45.12:0,45,1152	0/0:17,0:17:48.15:0,48,1443	0/0:16,0:16:48.16:0,48,1721	0/0:7,0:7:21.07:0,21,729
chr10	17737928	.	C	CT	1475.92	PASS	AB=0.875;AC=13;AF=0.232;AN=56;BaseQRankSum=-7.391;DP=361;FS=0.000;HRun=10;HaplotypeScore=46.0232;InbreedingCoeff=0.6286;MQ=71.82;MQ0=0;MQRankSum=1.243;QD=12.95;ReadPosRankSum=0.545;VQSLOD=2.8550;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:65.90:0,66,542	0/0:6,0:6:17.97:0,18,146	0/1:20,0:14:2.48:2,0,110	0/1:11,0:8:3.44:3,0,23	0/0:11,0:11:23.96:0,24,197	1/1:2,8:10:2.43:231,2,0	1/1:1,17:18:45.11:480,45,0	0/0:19,0:19:30.94:0,31,152	0/0:10,0:10:23.95:0,24,194	0/0:13,0:14:26.53:0,27,207	0/0:4,0:5:13.79:0,14,101	0/0:6,0:6:11.98:0,12,98	0/0:12,0:12:32.87:0,33,271	0/0:7,0:7:11.98:0,12,99	0/1:4,6:10:28.24:139,0,28	1/1:2,13:15:11.45:327,11,0	0/0:25,0:25:59.92:0,60,491	1/1:4,5:9:15.04:160,15,0	0/0:8,0:8:16.44:0,16,94	0/0:6,0:6:10.36:0,10,50	0/0:4,0:4:2.49:0,2,9	0/0:8,0:8:9.43:0,9,156	0/0:10,0:10:26.96:0,27,222	0/0:22,0:22:59.90:0,60,493	1/1:7,14:21:8.80:295,9,0	0/0:18,0:18:38.95:0,39,320	0/0:19,0:20:58.97:0,59,472	0/0:9,0:9:20.87:0,21,164
chr10	17738047	.	GC	G	198.14	PASS	AB=0.822;AC=15;AF=0.395;AN=38;BaseQRankSum=-2.910;DP=96;FS=9.165;HRun=12;HaplotypeScore=22.9884;InbreedingCoeff=0.2527;MQ=81.82;MQ0=1;MQRankSum=2.758;QD=4.31;ReadPosRankSum=1.143;VQSLOD=-0.3012;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:3,0:5:8.76:0,9,53	./.	0/0:9,0:5:6.01:0,6,59	0/1:11,0:9:26.16:26,0,32	0/1:4,4:8:18.35:58,0,18	1/1:1,0:2:2.02:6,2,0	1/1:2,5:8:10.83:75,11,0	./.	0/0:3,1:4:5.92:0,6,42	1/1:2,2:4:5.96:46,6,0	./.	0/0:5,0:5:5.91:0,6,38	./.	./.	0/0:2,0:3:0:0,0,0	0/0:6,0:6:5.32:0,5,14	1/1:0,2:2:5.98:46,6,0	1/1:2,2:4:2.96:23,3,0	./.	./.	0/0:5,0:4:3:0,3,25	0/0:1,0:4:2.74:0,3,12	./.	0/0:1,0:1:0.89:0,1,2	0/1:3,1:4:17.22:17,0,17	1/1:1,1:2:2.99:23,3,0	0/0:1,0:1:2.97:0,3,20	./.
chr10	17739557	.	TG	T	9481.75	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=20.374;DP=1205;FS=1.155;HRun=1;HaplotypeScore=196.5476;InbreedingCoeff=0.9994;MQ=56.14;MQ0=46;MQRankSum=-1.662;QD=31.29;ReadPosRankSum=4.048;VQSLOD=4.5257;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,53:55:99:1928,144,0	0/0:9,0:9:27.09:0,27,431	0/0:58,0:25:37.72:0,38,989	0/0:62,0:38:99:0,102,1554	0/0:23,0:23:69.23:0,69,1093	0/0:24,0:24:63.21:0,63,1007	0/0:48,0:48:99:0,138,2117	0/0:45,0:41:99:0,120,1865	0/0:59,0:59:99:0,161,2511	0/0:41,0:39:99:0,108,1695	0/0:30,0:30:90.29:0,90,1406	1/1:2,38:38:90.21:1210,90,0	1/1:2,45:45:99:1468,111,0	1/1:0,40:40:96.23:1291,96,0	0/0:64,0:64:99:0,160,2496	0/0:45,0:45:99:0,123,1929	0/0:38,0:38:99:0,111,1668	0/0:40,0:40:99:0,114,1757	0/0:35,0:30:87.30:0,87,1391	0/0:34,0:34:99:0,102,1627	0/0:131,0:127:99:0,358,5621	1/1:3,32:34:84.09:1135,84,0	1/1:2,31:30:69.19:941,69,0	1/1:8,45:52:99:1508,111,0	0/0:31,0:31:89.87:0,90,1346	0/0:52,0:49:99:0,147,2318	0/0:25,0:25:75.24:0,75,1174	0/0:8,0:8:24.08:0,24,384
chr10	17739562	.	AGT	A	7994.81	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=19.886;DP=1210;FS=2.348;HRun=0;HaplotypeScore=224.6896;InbreedingCoeff=0.9997;MQ=56.63;MQ0=33;MQRankSum=-3.662;QD=26.65;ReadPosRankSum=5.940;VQSLOD=5.6514;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:10,46:56:99:1691,134,0	0/0:9,0:9:27.09:0,27,450	0/0:57,0:29:83.66:0,84,1299	0/0:58,0:40:99:0,111,1717	0/0:24,0:24:63.16:0,63,1028	0/0:24,0:24:57.17:0,57,909	0/0:50,0:50:99:0,127,2128	0/0:45,0:41:99:0,102,1676	0/0:58,0:58:99:0,141,2361	0/0:40,0:39:96.33:0,96,1625	0/0:32,0:32:90.31:0,90,1525	1/1:14,29:41:75.24:963,75,0	1/1:9,36:43:99:1261,99,0	1/1:11,28:39:78.24:990,78,0	0/0:63,0:63:99:0,147,2439	0/0:46,0:46:99:0,120,1995	0/0:39,0:39:99:0,110,1714	0/0:39,0:40:99:0,110,1771	0/0:34,0:31:81.26:0,81,1312	0/0:33,1:34:51.28:0,51,1377	0/0:134,0:131:99:0,346,5637	1/1:3,32:34:81.07:1040,81,0	1/1:4,30:31:69.22:882,69,0	1/1:7,41:47:90.17:1168,90,0	0/0:30,0:30:77.03:0,77,1275	0/0:54,0:52:99:0,135,2278	0/0:28,0:28:81.25:0,81,1316	0/0:10,0:10:30.10:0,30,481
chr10	17739680	.	GCA	G	756.92	PASS	AB=0.847;AC=8;AF=0.143;AN=56;BaseQRankSum=7.636;DP=1008;FS=51.164;HRun=0;HaplotypeScore=288.7378;InbreedingCoeff=-0.1795;MQ=52.72;MQ0=11;MQRankSum=-3.943;QD=2.67;ReadPosRankSum=-5.659;VQSLOD=0.0923;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:51,16:67:50:0,50,1671	0/1:12,2:14:20.58:21,0,402	0/0:35,0:12:29.72:0,30,446	0/0:44,0:21:53.67:0,54,965	0/0:22,7:29:54.03:0,54,1047	0/0:22,0:22:32.93:0,33,562	0/0:38,0:38:84.12:0,84,1557	0/0:34,0:33:89.78:0,90,1756	0/0:48,0:48:43.04:0,43,1425	0/1:35,18:53:99:256,0,1794	0/0:13,7:19:26.96:0,27,527	0/1:41,4:45:45.53:46,0,1506	0/1:34,6:39:11.12:11,0,1669	0/0:26,10:36:54.11:0,54,1067	0/0:50,0:50:63.11:0,63,1145	0/0:32,0:32:45:0,45,794	0/1:45,6:50:99:144,0,1572	0/0:25,1:26:0.66:0,1,592	0/0:18,0:18:30.75:0,31,905	0/0:20,0:20:57.20:0,57,1079	0/0:84,1:85:99:0,192,3629	0/0:19,9:28:26.56:0,27,513	0/0:22,6:28:51.03:0,51,976	0/0:40,3:42:8.16:0,8,926	0/0:21,0:21:24.08:0,24,415	0/1:27,13:40:99:306,0,1216	0/1:16,7:22:76.64:77,0,688	0/1:17,1:18:30.96:31,0,825
chr10	17739687	.	CGTGTGTGTGTGT	C	2734.73	PASS	AB=0.922;AC=19;AF=0.339;AN=56;BaseQRankSum=-3.980;DP=997;FS=1.702;HRun=0;HaplotypeScore=401.4923;InbreedingCoeff=0.1238;MQ=50.90;MQ0=15;MQRankSum=-0.817;QD=5.63;ReadPosRankSum=1.872;VQSLOD=0.4017;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:72,0:72:8.64:0,9,716	0/1:17,0:17:28.48:28,0,228	0/0:38,0:8:5.88:0,6,36	0/0:52,0:19:9:0,9,141	0/1:27,0:27:63.44:63,0,136	1/1:3,15:19:14.71:499,15,0	1/1:17,16:33:14.78:431,15,0	0/0:24,0:30:51.04:0,51,863	0/1:45,0:45:82.16:82,0,321	0/1:51,0:51:15.83:16,0,2057	0/0:21,0:20:8.99:0,9,152	0/1:40,0:40:1.86:2,0,698	0/0:34,0:34:33.12:0,33,840	0/0:38,0:38:11.13:0,11,594	1/1:12,36:49:3.78:411,4,0	1/1:10,22:32:17.61:599,18,0	0/1:48,0:47:40.51:41,0,1278	0/1:6,17:23:0.53:386,0,1	0/0:12,0:20:39.11:0,39,954	0/0:7,0:19:36.59:0,37,1148	0/0:50,0:85:95.62:0,96,2269	0/0:27,0:27:12.43:0,12,206	0/0:27,0:27:15.32:0,15,169	0/1:39,0:38:16.72:17,0,122	0/1:5,16:21:26.20:292,0,26	0/0:44,0:44:52.27:0,52,2448	0/1:24,0:23:9.82:10,0,1034	0/1:18,0:18:31.09:31,0,648
chr10	17739689	.	T	TGC	5594.23	PASS	AB=0.978;AC=32;AF=0.571;AN=56;BaseQRankSum=-1.476;DP=990;FS=11.075;HRun=0;HaplotypeScore=277.5072;InbreedingCoeff=0.0481;MQ=50.49;MQ0=16;MQRankSum=-0.395;QD=7.21;ReadPosRankSum=3.670;VQSLOD=3.0263;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:68,0:68:67.15:525,0,67	0/1:16,0:16:38.57:96,0,39	0/1:41,0:8:2.25:2,0,95	0/0:55,0:18:24.68:0,25,228	1/1:25,1:26:43.88:364,44,0	1/1:18,0:18:11.35:53,11,0	1/1:33,0:33:45.48:307,45,0	0/0:31,0:30:7.98:0,8,467	1/1:37,6:43:54.66:354,55,0	0/1:51,0:51:99:436,0,105	0/1:20,0:19:2.57:117,0,3	0/1:40,0:40:59.35:316,0,59	0/1:34,0:33:0.44:346,0,0	0/1:35,2:37:25.51:254,0,26	1/1:47,0:47:26.67:207,27,0	1/1:32,0:32:20.26:180,20,0	0/1:47,2:48:68.41:408,0,68	0/1:22,0:22:30.61:32,0,31	0/0:21,0:19:26.71:0,27,345	0/0:21,0:21:41.37:0,41,295	0/0:86,0:86:99:0,126,1131	0/1:25,2:27:25.18:119,0,25	1/1:26,1:27:13.72:231,14,0	0/1:37,2:38:8.01:208,0,8	1/1:20,0:20:13.77:96,14,0	0/1:43,1:44:91.88:421,0,92	0/1:23,2:24:44.04:237,0,44	1/1:16,1:17:17.78:283,18,0
chr10	17739692	.	G	GTGTGTGTGTGTGTC	9142.72	PASS	AB=0.990;AC=22;AF=0.393;AN=56;BaseQRankSum=-0.764;DP=976;FS=34.081;HRun=0;HaplotypeScore=403.5212;InbreedingCoeff=-0.0096;MQ=48.70;MQ0=18;MQRankSum=-2.008;QD=14.54;ReadPosRankSum=-0.399;VQSLOD=2.0622;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:67,0:67:76.17:388,0,76	0/1:17,0:17:55.87:93,0,56	0/0:45,0:8:8.87:0,9,58	0/0:57,0:16:5.94:0,6,41	0/1:28,0:28:42.72:110,0,43	0/0:17,0:17:11.46:0,11,264	0/1:30,0:30:2.14:2,0,222	0/0:31,0:31:35.67:0,36,363	0/1:42,0:42:42.47:375,0,42	1/1:50,0:51:78.43:1800,78,0	0/1:21,0:20:41.76:54,0,42	0/1:37,0:37:15.37:457,0,15	0/1:34,0:33:23.76:483,0,24	0/1:34,1:35:1.61:387,0,2	0/1:46,0:46:10.05:10,0,246	0/0:29,0:29:14.30:0,14,197	0/1:46,1:46:37.40:1098,0,37	0/0:20,0:21:17.90:0,18,365	0/0:21,0:18:26.50:0,26,495	0/0:23,0:23:39.07:0,39,877	0/0:82,0:82:99:0,101,1610	1/1:23,2:26:2.16:102,2,0	0/1:27,0:28:4.07:42,0,4	0/1:34,1:35:6.04:138,0,6	0/0:19,0:19:5.85:0,6,112	1/1:41,1:42:51.56:2006,52,0	1/1:22,1:24:17.80:937,18,0	0/1:17,0:17:17.66:662,0,18
chr10	17739694	.	G	GTGTC	726.73	PASS	AB=0.967;AC=13;AF=0.232;AN=56;BaseQRankSum=6.359;DP=982;FS=25.793;HRun=0;HaplotypeScore=306.8919;InbreedingCoeff=-0.3110;MQ=48.50;MQ0=19;MQRankSum=-2.843;QD=1.55;ReadPosRankSum=0.720;VQSLOD=1.0404;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:65,0:66:3.52:4,0,356	0/1:16,0:16:42.67:43,0,131	0/0:48,0:8:7.86:0,8,69	0/0:62,0:17:32.83:0,33,286	0/0:27,0:27:34.53:0,35,275	0/0:17,0:17:17.81:0,18,160	0/0:27,0:27:35.93:0,36,308	0/0:34,0:33:68.83:0,69,548	0/1:20,13:42:60.49:60,0,194	0/1:51,0:51:99:138,0,342	0/0:21,0:20:18.30:0,18,164	0/1:37,0:37:25.75:26,0,210	0/1:35,0:34:46.37:46,0,211	0/1:34,0:35:35.14:35,0,193	0/0:46,0:46:29.98:0,30,264	0/0:29,0:29:3.60:0,4,144	0/1:48,0:47:99:127,0,255	0/0:20,0:20:14.93:0,15,130	0/0:21,0:17:47.85:0,48,384	0/0:23,0:23:41.37:0,41,410	0/0:85,0:85:99:0,140,1297	0/1:28,0:28:9.70:10,0,101	0/1:29,0:29:18.72:19,0,163	0/0:34,0:33:7.08:0,7,146	0/0:18,0:18:14.71:0,15,103	0/1:40,0:40:99:194,0,266	0/1:24,0:24:99:136,0,104	0/1:17,0:17:38.78:39,0,163
chr10	17741389	.	C	CCAAA	16953.45	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=1.221;DP=604;FS=1.059;HRun=0;HaplotypeScore=135.2233;InbreedingCoeff=0.9666;MQ=70.35;MQ0=2;MQRankSum=-2.683;QD=38.10;ReadPosRankSum=2.072;VQSLOD=5.0774;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:27:39.11:643,39,0	1/1:4,8:12:18.06:438,18,0	0/0:40,0:28:23.71:0,24,326	0/0:27,0:21:10.63:0,11,211	1/1:2,15:18:48.16:1102,48,0	1/1:3,19:22:48.16:1168,48,0	1/1:9,14:24:45.07:1037,45,0	0/0:31,0:31:42.14:0,42,685	1/1:4,8:12:24.08:580,24,0	1/1:8,12:20:39.13:935,39,0	1/1:3,19:23:57.19:1315,57,0	1/1:7,0:24:36.12:629,36,0	1/1:7,0:15:21.07:366,21,0	1/1:10,0:19:24.08:416,24,0	1/1:5,10:15:27.09:657,27,0	1/1:5,5:11:15.05:365,15,0	1/1:10,19:30:60.21:1424,60,0	1/1:18,27:46:20.25:1557,20,0	0/0:25,0:25:33.11:0,33,538	0/0:30,0:30:75.24:0,75,1197	0/0:6,0:6:12.04:0,12,196	1/1:12,0:22:24.08:421,24,0	1/1:11,0:25:24.08:415,24,0	1/1:13,1:16:15.05:253,15,0	1/1:6,10:16:27.09:623,27,0	1/1:3,13:17:45.15:1006,45,0	1/1:7,17:24:54.18:1309,54,0	1/1:2,4:7:12.04:292,12,0
chr10	17741726	.	T	TCAAACAAACAAA	5810.89	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-5.448;DP=510;FS=0.678;HRun=0;HaplotypeScore=154.3688;InbreedingCoeff=0.8757;MQ=73.63;MQ0=0;MQRankSum=-8.730;QD=44.36;ReadPosRankSum=-2.596;VQSLOD=3.8121;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,17:29:33.11:1674,33,0	0/0:4,0:4:9.03:0,9,313	0/0:28,0:27:4.57:0,5,182	0/0:29,0:27:9.70:0,10,236	0/0:16,0:16:36.12:0,36,1250	0/0:25,0:25:60.17:0,60,1819	0/0:20,0:20:41.95:0,42,1081	0/0:34,0:34:39.06:0,39,938	0/0:6,0:16:21.07:0,21,587	0/0:15,0:15:27.07:0,27,783	0/0:17,0:17:36.12:0,36,1033	1/1:3,10:18:12.04:697,12,0	1/1:4,11:19:30.10:1635,30,0	1/1:3,8:15:14.88:875,15,0	0/0:16,0:16:42.14:0,42,1408	0/0:12,0:12:30.09:0,30,884	0/0:24,0:24:51.15:0,51,1381	0/0:16,0:16:30.10:0,30,1042	0/0:20,0:20:36.02:0,36,1005	0/0:14,0:14:24.05:0,24,675	0/0:25,0:25:66.20:0,66,2048	1/1:5,4:12:6.02:229,6,0	1/1:9,2:14:3.01:175,3,0	1/1:10,11:24:9.03:525,9,0	0/0:8,0:8:12.04:0,12,417	0/0:17,0:17:36.12:0,36,1228	0/0:14,0:14:21.04:0,21,512	0/0:9,0:9:21.06:0,21,651
chr10	17742408	.	GAAGAAAGAAAGAAAGAAAGA	G	12296.40	PASS	AB=1.000;AC=31;AF=0.574;AN=54;BaseQRankSum=0.174;DP=470;FS=0.465;HRun=0;HaplotypeScore=266.8274;InbreedingCoeff=0.3384;MQ=63.76;MQ0=3;MQRankSum=-3.928;QD=36.93;ReadPosRankSum=5.440;VQSLOD=3.4004;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:18.27:0,18,596	1/1:8,0:8:18.06:486,18,0	0/1:16,0:13:0:0,0,0	./.	0/1:19,0:19:99:902,0,110	1/1:19,0:19:39.12:1136,39,0	1/1:18,0:19:16.42:615,16,0	0/1:26,0:26:99:138,0,201	0/1:18,0:18:63.46:63,0,247	1/1:21,0:21:30.10:950,30,0	1/1:6,0:6:12.04:396,12,0	0/0:15,0:17:29.21:0,29,757	0/0:17,0:17:21.06:0,21,464	0/0:27,0:28:63.20:0,63,1614	1/1:21,0:21:39.13:1400,39,0	1/1:15,0:15:8.02:1230,8,0	1/1:23,0:23:17.75:713,18,0	0/1:19,0:20:46.72:506,0,47	0/1:17,0:17:99:342,0,202	0/1:16,0:16:12.52:116,0,13	0/1:9,0:8:30.36:179,0,30	0/0:12,0:13:30.08:0,30,897	0/0:16,0:16:24.08:0,24,867	0/0:18,0:18:22.70:0,23,296	0/1:25,0:25:58.95:1577,0,59	1/1:11,10:20:28.71:722,29,0	1/1:10,0:10:24.06:631,24,0	1/1:4,0:4:6:197,6,0
chr10	17742425	.	AAG	A	490.88	PASS	AB=0.785;AC=6;AF=0.107;AN=56;BaseQRankSum=6.489;DP=472;FS=0.000;HRun=0;HaplotypeScore=162.1245;InbreedingCoeff=-0.1290;MQ=41.20;MQ0=12;MQRankSum=-3.528;QD=6.63;ReadPosRankSum=3.911;VQSLOD=3.3347;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:19:48.14:0,48,725	0/0:8,0:8:23.59:0,24,216	0/0:5,0:3:2.84:0,3,14	0/0:4,0:3:3.01:0,3,42	0/0:26,0:25:24.63:0,25,506	0/0:21,0:21:46.96:0,47,612	0/0:18,0:17:44.81:0,45,631	0/1:13,8:21:99:392,0,421	0/0:18,0:17:45.12:0,45,674	0/0:27,0:24:7.80:0,8,369	0/0:7,0:7:5.32:0,5,132	0/0:18,0:17:45.15:0,45,754	0/0:16,0:16:41.97:0,42,610	0/0:27,0:27:75.25:0,75,1278	0/0:20,0:18:30.49:0,30,492	0/0:18,0:16:23.83:0,24,430	0/0:23,0:23:51.06:0,51,580	0/0:18,0:16:40.71:0,41,489	0/1:10,4:12:99:106,0,234	0/1:2,0:13:28.98:29,0,35	0/1:4,4:7:66.57:67,0,107	0/0:14,0:14:36.12:0,36,638	0/0:19,0:18:33.11:0,33,538	0/0:20,0:18:36.86:0,37,489	0/0:28,0:27:62.03:0,62,808	0/0:22,0:20:9.13:0,9,365	0/1:14,0:13:3.51:4,0,195	0/1:4,0:4:10.11:10,0,34
chr10	17742427	.	GA	G	106.36	PASS	AB=0.967;AC=6;AF=0.107;AN=56;BaseQRankSum=5.157;DP=471;FS=4.487;HRun=3;HaplotypeScore=159.3242;InbreedingCoeff=-0.0341;MQ=40.84;MQ0=12;MQRankSum=-3.555;QD=1.24;ReadPosRankSum=-0.233;VQSLOD=-0.5488;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:19:48.12:0,48,599	0/0:9,0:9:16.94:0,17,200	1/1:4,0:2:0.89:2,1,0	0/0:3,0:2:3.01:0,3,42	0/0:26,0:25:9.08:0,9,476	0/0:19,2:21:35.16:0,35,484	0/0:17,1:17:9.19:0,9,487	0/0:20,0:20:8.44:0,8,347	0/0:18,0:17:25.34:0,25,515	0/1:27,0:24:25.12:25,0,302	0/0:8,0:8:17.61:0,18,193	0/0:18,0:17:45.11:0,45,613	0/0:17,0:17:39.02:0,39,494	0/0:27,0:27:75.25:0,75,1051	0/0:17,3:18:5.72:0,6,405	0/0:17,2:17:3.22:0,3,413	0/1:21,2:23:56.20:56,0,515	0/1:17,1:16:92.32:92,0,297	0/0:13,0:11:13.84:0,14,175	0/0:14,0:14:4.82:0,5,32	0/0:8,0:7:6.61:0,7,70	0/0:15,0:15:36.12:0,36,497	0/0:19,0:18:33.11:0,33,459	0/0:20,0:18:6.83:0,7,385	0/0:26,1:26:7.71:0,8,636	0/0:21,0:19:7.05:0,7,388	0/1:14,0:13:38.97:39,0,185	0/0:4,0:4:3.40:0,3,57
chr10	17742435	.	GAAA	G	1074.50	PASS	AB=0.878;AC=14;AF=0.269;AN=52;BaseQRankSum=4.100;DP=482;FS=4.772;HRun=3;HaplotypeScore=200.0380;InbreedingCoeff=-0.3806;MQ=36.40;MQ0=13;MQRankSum=-2.934;QD=4.23;ReadPosRankSum=2.258;VQSLOD=-0.1494;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:19:51.14:0,51,856	0/1:11,0:11:99:101,0,130	./.	./.	0/1:17,8:24:99:127,0,292	0/1:17,0:20:78.94:97,0,79	0/1:19,0:18:88.69:89,0,195	0/0:24,0:24:47.56:0,48,632	0/0:19,0:18:48.10:0,48,711	0/1:20,5:22:99:154,0,261	0/1:5,3:8:56.19:56,0,132	0/0:18,0:17:47.93:0,48,808	0/0:15,0:15:39.12:0,39,653	0/0:26,0:26:72.23:0,72,1442	0/1:18,0:20:73.90:74,0,168	0/1:16,0:18:50.34:50,0,170	0/1:24,1:25:96.70:97,0,378	0/0:17,0:16:17.33:0,17,318	0/0:18,0:14:31.59:0,32,401	0/0:14,0:14:3.10:0,3,49	0/1:8,0:7:18.60:19,0,61	0/0:16,0:16:39.13:0,39,792	0/0:21,0:20:36.12:0,36,630	0/0:19,0:17:35.73:0,36,465	0/1:22,0:25:43.16:43,0,295	0/1:20,2:20:99:119,0,223	0/1:13,2:14:88.60:148,0,89	0/1:6,2:8:50.43:50,0,153
chr10	17742445	.	AAG	A	547.25	PASS	AB=0.696;AC=2;AF=0.038;AN=52;BaseQRankSum=2.034;DP=481;FS=3.030;HRun=0;HaplotypeScore=205.0626;InbreedingCoeff=-0.0652;MQ=35.08;MQ0=14;MQRankSum=-3.156;QD=14.03;ReadPosRankSum=2.783;VQSLOD=3.5729;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:22:52.73:0,53,834	0/0:10,0:10:13.06:0,13,217	./.	./.	0/0:25,0:24:32.56:0,33,478	0/0:17,0:17:37.52:0,38,432	0/0:19,0:17:36.05:0,36,465	0/1:13,10:22:99:395,0,353	0/0:17,0:16:42.13:0,42,641	0/0:28,0:25:21.31:0,21,530	0/0:13,0:13:25.67:0,26,350	0/0:18,0:17:48.05:0,48,739	0/0:14,0:14:36.12:0,36,572	0/0:25,0:25:66.15:0,66,1121	0/0:24,0:22:50.90:0,51,580	0/0:19,0:17:32.29:0,32,433	0/0:26,0:26:45.06:0,45,686	0/0:17,0:15:37.19:0,37,482	0/1:9,7:11:99:240,0,146	0/0:15,0:15:5.39:0,5,95	0/0:5,0:5:4.72:0,5,79	0/0:17,0:17:42.14:0,42,710	0/0:24,0:23:33.11:0,33,535	0/0:17,0:15:30.29:0,30,441	0/0:25,0:24:57.01:0,57,652	0/0:23,0:21:19.39:0,19,360	0/0:13,0:12:0.84:0,1,198	0/0:8,0:8:6.54:0,7,186
chr10	17742488	.	AAAGGAAGG	A	2781.67	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=-2.306;DP=503;FS=7.997;HRun=0;HaplotypeScore=214.7230;InbreedingCoeff=0.2880;MQ=42.90;MQ0=14;MQRankSum=-6.451;QD=11.45;ReadPosRankSum=-6.765;VQSLOD=-0.4169;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:22:1.49:455,1,0	0/0:8,0:8:19.39:0,19,386	0/0:6,0:2:5.23:0,5,42	0/0:4,0:2:6.02:0,6,114	0/1:26,0:25:18.85:19,0,907	0/0:19,0:19:31.35:0,31,387	0/0:21,0:20:31.30:0,31,525	0/1:16,0:15:99:235,0,112	0/0:18,0:17:12.17:0,12,168	0/1:29,0:25:33.51:34,0,1084	0/0:22,0:22:56.31:0,56,1390	1/1:20,0:19:14.50:570,14,0	0/1:14,0:14:73.68:263,0,74	0/1:18,0:18:21.93:373,0,22	0/0:24,0:22:46.21:0,46,619	0/0:23,0:21:30.47:0,30,572	0/1:27,0:27:14.26:14,0,1088	0/0:14,0:13:8.82:0,9,259	0/1:10,0:5:28.24:72,0,28	1/1:18,0:18:9.74:173,10,0	1/1:8,0:8:9.68:125,10,0	1/1:14,0:14:1.98:197,2,0	0/0:9,12:20:7.16:0,7,63	1/1:20,0:18:15.81:429,16,0	0/0:17,0:16:28.72:0,29,467	0/0:27,0:25:9.20:0,9,1320	0/0:21,0:20:25.50:0,26,927	0/0:15,0:15:27.62:0,28,940
chr10	17742510	.	A	AGAAT	4595.72	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=-1.309;DP=520;FS=13.884;HRun=0;HaplotypeScore=157.5762;InbreedingCoeff=0.9107;MQ=61.68;MQ0=5;MQRankSum=-6.794;QD=24.06;ReadPosRankSum=-4.354;VQSLOD=2.5006;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:22:53.71:530,54,0	0/1:7,0:7:12.12:12,0,165	0/0:14,0:10:18.74:0,19,219	0/0:12,0:10:26.98:0,27,321	0/0:26,0:25:59.92:0,60,744	0/0:16,0:16:20.61:0,21,500	0/0:25,0:24:53.98:0,54,696	1/1:19,0:19:45.07:626,45,0	0/0:21,0:20:51.17:0,51,869	0/0:20,0:17:33.47:0,33,432	0/0:22,0:22:59.93:0,60,772	1/1:19,0:19:48.02:643,48,0	1/1:13,0:13:29.96:382,30,0	1/1:15,0:15:32.94:415,33,0	0/0:24,0:23:56.70:0,57,621	0/0:20,0:18:47.76:0,48,609	0/0:30,0:30:77.89:0,78,982	0/0:18,0:17:45.02:0,45,640	1/1:15,0:12:30.02:376,30,0	1/1:14,3:17:32.57:552,33,0	1/1:12,2:14:33.82:423,34,0	1/1:8,0:8:15.04:222,15,0	1/1:24,0:23:5.93:49,6,0	1/1:17,0:16:35.89:366,36,0	0/0:17,0:17:32.02:0,32,393	0/0:29,0:29:77.95:0,78,1026	0/0:20,0:19:30.10:0,30,656	0/0:15,0:15:45.08:0,45,594
chr10	17742766	.	TAGACGGC	T	7028.88	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=13.872;DP=575;FS=9.988;HRun=0;HaplotypeScore=136.1043;InbreedingCoeff=0.9982;MQ=66.27;MQ0=0;MQRankSum=-14.327;QD=50.93;ReadPosRankSum=2.099;VQSLOD=4.5330;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,35:40:66.23:1712,66,0	0/0:13,0:13:36.12:0,36,1366	0/0:10,0:10:29.93:0,30,970	0/0:15,0:15:42.14:0,42,1476	0/0:19,0:19:54.19:0,54,2178	0/0:19,0:19:57.17:0,57,2117	0/0:26,0:26:75.24:0,75,2771	0/0:22,0:22:60.21:0,60,2353	0/0:24,0:24:69.24:0,69,2765	0/0:19,0:19:48.16:0,48,1865	0/0:14,0:14:33.11:0,33,1332	1/1:1,18:19:54.19:1400,54,0	1/1:2,10:12:33.11:866,33,0	1/1:2,14:16:36.12:943,36,0	0/0:22,0:22:63.22:0,63,2468	0/0:15,0:15:45.15:0,45,1745	0/0:42,0:42:99:0,117,4489	0/0:32,0:32:96.30:0,96,3674	0/0:20,0:21:57.19:0,57,2003	0/0:12,0:12:24.08:0,24,921	0/0:31,0:31:90.29:0,90,3407	1/1:0,13:13:24.08:632,24,0	1/1:1,8:9:20.86:553,21,0	1/1:6,23:29:35.69:922,36,0	0/0:17,0:17:45.15:0,45,1642	0/0:25,0:25:75.25:0,75,2920	0/0:20,0:19:60.17:0,60,2082	0/0:19,0:19:51.18:0,51,2026
chr10	17742915	.	AAG	A	5135.98	PASS	AB=0.833;AC=23;AF=0.411;AN=56;BaseQRankSum=12.707;DP=593;FS=2.165;HRun=0;HaplotypeScore=81.9776;InbreedingCoeff=0.9170;MQ=69.57;MQ0=1;MQRankSum=2.918;QD=21.58;ReadPosRankSum=-0.226;VQSLOD=5.1878;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:72.21:0,72,1140	1/1:2,10:12:21.01:258,21,0	0/0:24,0:17:14.09:0,14,287	0/0:24,0:15:11.28:0,11,321	1/1:7,24:31:69.18:833,69,0	0/0:19,0:19:51.17:0,51,806	0/0:28,1:29:41.33:0,41,1177	1/1:6,17:23:50.53:603,51,0	0/0:21,0:21:57.16:0,57,875	0/1:8,2:9:58.77:59,0,132	1/1:4,18:22:42.05:483,42,0	0/0:27,0:27:63.21:0,63,1007	0/0:16,0:16:42.13:0,42,660	0/0:16,0:16:33.11:0,33,531	0/0:26,0:26:66.23:0,66,1063	0/0:16,0:16:36.11:0,36,563	1/1:6,24:31:41.55:494,42,0	0/0:32,0:32:84.25:0,84,1306	1/1:9,9:18:27.06:316,27,0	1/1:4,15:19:39.09:461,39,0	1/1:3,13:17:26.88:329,27,0	0/0:17,0:17:39.13:0,39,615	0/0:14,0:14:42.14:0,42,678	0/0:29,0:29:69.22:0,69,1093	0/0:11,0:11:33.11:0,33,538	1/1:6,17:23:26.31:600,26,0	1/1:7,13:20:29.74:369,30,0	1/1:1,11:12:27.08:332,27,0
chr10	17744165	.	G	GAACC	14495.02	PASS	AC=50;AF=0.926;AN=54;BaseQRankSum=2.885;DP=270;FS=1.194;HRun=0;HaplotypeScore=155.2056;InbreedingCoeff=0.7478;MQ=56.60;MQ0=9;MQRankSum=-5.802;QD=57.75;ReadPosRankSum=2.536;VQSLOD=5.8182;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:23,2:26:44.76:1022,45,0	1/1:3,0:3:9.03:205,9,0	0/0:10,0:8:23.87:0,24,379	0/0:8,0:5:9.92:0,10,164	1/1:2,1:3:3.01:84,3,0	1/1:10,0:10:24.08:572,24,0	1/1:9,0:11:27.06:665,27,0	1/1:13,0:12:33.10:753,33,0	1/1:8,0:8:24.06:570,24,0	1/1:7,1:8:20.65:505,21,0	1/1:8,0:9:21.07:519,21,0	1/1:13,0:13:39.12:949,39,0	1/1:9,0:9:27.08:620,27,0	1/1:10,1:13:33.11:851,33,0	1/1:17,0:17:48.15:1186,48,0	1/1:12,1:12:36.12:952,36,0	1/1:12,1:13:30.09:723,30,0	1/1:7,0:6:15.05:392,15,0	1/1:7,1:8:21.07:500,21,0	1/1:5,0:5:6.02:154,6,0	1/1:11,0:9:11.02:186,11,0	1/1:9,0:8:24.08:622,24,0	1/1:3,0:3:5.98:103,6,0	1/1:6,0:6:16.87:330,17,0	1/1:11,0:11:21.07:550,21,0	1/1:13,0:13:39.13:1018,39,0	1/1:6,0:6:18.06:465,18,0	./.
chr10	17744586	.	GAAAA	G	5004.88	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-2.757;DP=559;FS=2.853;HRun=13;HaplotypeScore=121.6959;InbreedingCoeff=0.9892;MQ=81.60;MQ0=8;MQRankSum=-4.761;QD=30.89;ReadPosRankSum=5.208;VQSLOD=3.7165;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:39:99:0,114,2612	1/1:2,7:9:21.05:307,21,0	0/0:39,0:29:53.17:0,53,857	0/0:35,0:25:50.36:0,50,663	1/1:5,11:16:23.89:324,24,0	0/0:2,0:20:35.79:0,36,239	0/0:5,1:28:18.12:0,18,395	0/0:4,0:19:48.07:0,48,601	1/1:5,13:18:34.29:486,34,0	1/1:3,10:13:30.10:435,30,0	1/1:1,7:8:12:175,12,0	0/0:19,0:20:51.16:0,51,1142	0/0:15,0:17:35.90:0,36,781	0/0:13,0:16:33.11:0,33,688	0/0:6,0:12:20.58:0,21,129	0/0:3,0:15:19.27:0,19,130	1/1:6,34:40:84.24:1228,84,0	0/0:3,0:23:40.61:0,41,263	0/0:9,0:23:48.15:0,48,661	0/0:8,0:20:45.09:0,45,577	0/0:2,0:11:27.08:0,27,336	0/0:8,0:11:21.07:0,21,420	0/0:15,0:15:45.13:0,45,977	0/0:14,0:14:36.12:0,36,866	0/0:1,0:14:19.06:0,19,130	1/1:4,19:24:61.45:869,61,0	1/1:2,16:18:39.11:567,39,0	1/1:1,15:16:42.11:614,42,0
chr10	17744782	.	C	CG	637.31	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=0.434;DP=570;FS=0.000;HRun=2;HaplotypeScore=68.8953;InbreedingCoeff=0.9807;MQ=75.75;MQ0=0;MQRankSum=-2.668;QD=26.55;ReadPosRankSum=1.379;VQSLOD=3.3029;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,117,1396	0/0:9,0:9:27.04:0,27,316	0/0:13,0:13:30.09:0,30,369	0/0:14,0:15:38.66:0,39,405	0/0:19,0:19:47.84:0,48,591	0/0:30,0:30:90.28:0,90,1112	0/0:24,0:24:72.21:0,72,879	0/0:28,0:28:81:0,81,903	1/1:1,23:24:50.91:732,51,0	0/0:12,0:12:27.08:0,27,327	0/0:20,0:20:30.80:0,31,488	0/0:18,0:18:51.16:0,51,629	0/0:21,0:21:60.03:0,60,681	0/0:13,0:13:36.11:0,36,445	0/0:19,0:19:54.12:0,54,640	0/0:12,0:12:36.10:0,36,432	0/0:41,0:41:99:0,123,1488	0/0:23,0:23:69.19:0,69,838	0/0:18,0:18:45.13:0,45,538	0/0:9,0:9:18.06:0,18,222	0/0:38,0:38:99:0,111,1311	0/0:13,0:13:33:0,33,385	0/0:16,0:16:41.95:0,42,484	0/0:26,0:26:78.23:0,78,951	0/0:18,0:18:48.04:0,48,571	0/0:23,0:23:53.61:0,54,615	0/0:17,0:17:48.15:0,48,591	0/0:6,0:6:18.06:0,18,223
chr10	17745678	.	CCCTTTCCTTT	C	2154.38	PASS	AB=0.739;AC=11;AF=0.212;AN=52;BaseQRankSum=-0.870;DP=535;FS=0.992;HRun=0;HaplotypeScore=187.2411;InbreedingCoeff=0.8084;MQ=57.46;MQ0=3;MQRankSum=-5.009;QD=21.12;ReadPosRankSum=2.509;VQSLOD=2.3330;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:42.06:0,42,1045	0/0:9,0:9:21.07:0,21,728	./.	0/0:18,0:8:1.82:0,2,5	0/0:23,0:23:45.14:0,45,1516	1/1:10,8:18:18.06:511,18,0	./.	0/0:33,0:33:21.01:0,21,288	1/1:9,0:18:6.02:140,6,0	0/0:21,0:20:36.08:0,36,1104	0/0:19,0:19:24.08:0,24,763	0/0:12,0:12:24.08:0,24,880	0/0:12,0:12:24.08:0,24,860	0/0:20,0:20:30.10:0,30,1036	1/1:11,8:19:18.06:508,18,0	1/1:5,6:11:12.04:354,12,0	0/0:24,0:24:23.85:0,24,711	0/1:11,6:17:72.49:220,0,72	0/0:19,0:26:24.96:0,25,889	0/0:13,0:15:39.12:0,39,1293	0/0:25,0:25:24.03:0,24,598	0/0:15,0:15:27.09:0,27,858	0/0:15,0:15:36.12:0,36,1197	0/0:23,0:23:14.92:0,15,385	1/1:7,12:19:21.07:586,21,0	0/0:16,0:15:27.09:0,27,971	0/0:28,0:27:39.13:0,39,1284	0/0:19,0:18:39.13:0,39,1286
chr10	17746152	.	ACCCCCC	A	15165.65	PASS	AB=0.621;AC=50;AF=0.893;AN=56;BaseQRankSum=-1.558;DP=575;FS=9.518;HRun=14;HaplotypeScore=182.0989;InbreedingCoeff=0.5937;MQ=60.25;MQ0=1;MQRankSum=-4.826;QD=28.51;ReadPosRankSum=6.073;VQSLOD=1.5404;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,24:33:57.04:1086,57,0	1/1:0,0:5:14.16:69,14,0	0/0:21,0:16:27.91:0,28,544	0/0:20,0:14:18.95:0,19,372	1/1:3,0:27:42.61:209,43,0	1/1:7,19:26:45.05:858,45,0	1/1:7,13:20:33.04:629,33,0	1/1:7,13:20:42:765,42,0	0/1:6,0:20:42.86:113,0,43	1/1:2,0:20:19.98:218,20,0	0/1:8,0:17:56.60:68,0,57	1/1:2,21:23:63.19:1201,63,0	1/1:10,13:23:38.99:743,39,0	1/1:1,16:17:48.14:915,48,0	1/1:5,18:23:54.12:1030,54,0	1/1:0,10:10:27.09:515,27,0	1/1:4,0:27:62.10:277,62,0	1/1:7,10:17:29.97:572,30,0	1/1:8,14:22:42.01:774,42,0	1/1:4,13:17:36.05:686,36,0	1/1:9,18:27:41.36:799,41,0	1/1:1,19:20:54.18:1029,54,0	1/1:3,13:16:42.10:801,42,0	1/1:6,11:17:24:420,24,0	1/1:1,14:15:42.14:801,42,0	1/1:5,0:33:21.56:314,22,0	1/1:3,0:29:53.51:217,54,0	1/1:0,0:8:6.90:59,7,0
chr10	17747462	.	A	ACC	4907.03	PASS	AB=0.609;AC=35;AF=0.625;AN=56;BaseQRankSum=-6.544;DP=505;FS=3.668;HRun=8;HaplotypeScore=79.7769;InbreedingCoeff=0.8444;MQ=95.34;MQ0=0;MQRankSum=-3.910;QD=14.91;ReadPosRankSum=-1.099;VQSLOD=2.4376;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,0:26:9.45:79,9,0	0/0:10,0:10:27.07:0,27,301	0/0:27,0:27:60.13:0,60,659	0/0:20,0:20:40.95:0,41,424	0/0:18,0:18:33.04:0,33,365	1/1:2,13:15:9.03:143,9,0	1/1:9,23:33:53.67:816,54,0	1/1:12,0:33:15.01:175,15,0	1/1:5,4:9:3.01:44,3,0	0/0:11,0:11:24.04:0,24,261	0/0:13,0:13:38.94:0,39,415	1/1:1,12:14:32.49:453,32,0	1/1:5,4:24:24.02:297,24,0	1/1:6,1:21:18.02:187,18,0	1/1:1,21:22:39.13:619,39,0	1/1:2,12:14:24.08:381,24,0	0/0:22,0:22:60.13:0,60,657	1/1:5,19:26:44.64:675,45,0	1/1:1,0:19:45.58:170,46,0	1/1:1,0:20:48.55:195,49,0	0/1:5,0:14:12.58:53,0,13	1/1:2,0:4:6.01:57,6,0	1/1:3,0:8:5.71:49,6,0	1/1:5,0:14:9.01:86,9,0	1/1:2,10:13:27.09:429,27,0	0/0:17,0:17:42.10:0,42,468	0/0:23,0:23:69.19:0,69,768	0/0:15,0:15:39.10:0,39,435
chr10	17747703	.	CT	C	5718.17	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=3.358;DP=484;FS=1.290;HRun=11;HaplotypeScore=60.5149;InbreedingCoeff=0.9410;MQ=75.33;MQ0=0;MQRankSum=0.367;QD=18.15;ReadPosRankSum=1.305;VQSLOD=5.8721;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,30:32:55.48:593,55,0	0/0:6,0:6:18.05:0,18,192	0/0:12,0:12:4.41:0,4,98	0/0:14,0:12:2.13:0,2,56	0/0:24,1:25:26.48:0,26,487	1/1:3,20:23:56.93:468,57,0	1/1:2,12:14:23.97:197,24,0	1/1:6,20:27:61.96:499,62,0	1/1:0,0:17:30.56:88,31,0	0/0:19,0:19:42.10:0,42,443	0/0:22,0:22:54.12:0,54,564	1/1:1,14:15:41.94:345,42,0	1/1:1,17:18:47.95:394,48,0	1/1:1,17:18:47.94:394,48,0	1/1:5,7:12:20.96:172,21,0	1/1:1,12:13:35.94:295,36,0	0/0:20,0:20:54.09:0,54,561	1/1:4,24:28:65.89:542,66,0	1/1:4,8:12:23.96:197,24,0	1/1:5,9:14:26.96:222,27,0	1/1:3,11:14:29.95:246,30,0	1/1:1,5:6:11.97:99,12,0	1/1:3,13:16:35.94:296,36,0	1/1:2,14:16:41.95:345,42,0	1/1:4,15:20:40.97:326,41,0	0/0:27,0:27:69.17:0,69,735	0/0:14,0:14:36.09:0,36,381	0/0:9,0:9:24.06:0,24,256
chr10	17748128	.	C	CCA	6313.32	PASS	AB=0.721;AC=25;AF=0.446;AN=56;BaseQRankSum=2.191;DP=783;FS=9.585;HRun=0;HaplotypeScore=158.6061;InbreedingCoeff=0.7598;MQ=61.94;MQ0=20;MQRankSum=-1.992;QD=17.59;ReadPosRankSum=0.328;VQSLOD=4.3118;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:38:65.31:0,65,990	1/1:11,1:11:26.10:232,26,0	0/0:42,0:12:12:0,12,143	0/0:41,0:11:11.46:0,11,115	0/1:18,1:19:16.48:244,0,16	1/1:16,5:20:39.12:613,39,0	0/1:9,18:29:4.55:428,0,5	0/0:37,0:37:81.24:0,81,988	0/0:30,0:30:81.26:0,81,1008	1/1:31,5:34:75.75:874,76,0	1/1:24,1:24:25.74:218,26,0	0/0:25,0:24:53.95:0,54,638	0/0:18,0:19:47.51:0,48,568	0/0:27,0:27:57.18:0,57,712	1/1:6,23:28:39.13:639,39,0	1/1:9,21:29:4.60:584,5,0	1/1:33,5:36:10.68:491,11,0	0/1:13,20:32:14.23:545,0,14	0/0:15,0:15:27.08:0,27,334	0/0:21,0:21:54.17:0,54,674	0/0:55,0:54:99:0,125,1509	0/0:18,0:18:38.98:0,39,475	0/0:19,0:19:30.08:0,30,362	0/0:35,0:34:81.26:0,81,1010	1/1:9,10:20:18.06:266,18,0	1/1:33,1:33:7.55:600,8,0	1/1:20,2:22:40.86:415,41,0	1/1:10,1:11:23.02:163,23,0
chr10	17748140	.	ACG	A	5376.60	PASS	AB=0.950;AC=19;AF=0.339;AN=56;BaseQRankSum=10.780;DP=772;FS=10.490;HRun=0;HaplotypeScore=159.7133;InbreedingCoeff=0.7230;MQ=59.32;MQ0=22;MQRankSum=-0.680;QD=19.99;ReadPosRankSum=1.143;VQSLOD=4.9190;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:14.46:0,14,979	1/1:1,11:11:26.56:346,27,0	0/0:35,0:8:11.99:0,12,142	0/0:36,0:6:9.02:0,9,147	1/1:3,19:22:22.52:440,23,0	0/1:14,3:16:99:154,0,151	0/0:25,0:25:4.70:0,5,252	0/0:39,0:38:99:0,108,1586	0/0:32,0:32:61.43:0,61,965	1/1:6,24:28:81.09:1008,81,0	1/1:3,20:22:24.55:361,25,0	0/0:31,0:30:26.20:0,26,639	0/0:22,0:22:27.74:0,28,568	0/0:25,0:25:60.13:0,60,771	0/0:30,0:29:21.49:0,21,358	0/1:29,0:28:11.36:11,0,385	1/1:11,28:37:21.20:965,21,0	0/1:30,0:29:23.19:23,0,338	0/0:12,0:12:29.47:0,29,492	0/0:23,0:23:59.82:0,60,957	0/0:61,0:55:99:0,115,2161	0/0:18,0:18:29.17:0,29,455	0/0:16,0:16:35.68:0,36,391	0/0:36,0:35:80.96:0,81,1074	0/0:18,0:18:9.70:0,10,214	1/1:5,30:34:35.91:1022,36,0	1/1:3,19:22:51.04:688,51,0	1/1:1,9:10:24.08:358,24,0
chr10	17748146	.	GCA	G	4226.79	PASS	AB=0.929;AC=27;AF=0.482;AN=56;BaseQRankSum=-6.017;DP=786;FS=1.166;HRun=0;HaplotypeScore=169.2156;InbreedingCoeff=0.1731;MQ=58.65;MQ0=23;MQRankSum=1.811;QD=7.81;ReadPosRankSum=3.080;VQSLOD=4.7448;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:20,25:47:58.07:608,58,0	0/0:12,0:11:19.79:0,20,98	0/0:31,0:6:2.96:0,3,19	0/0:39,0:8:5.44:0,5,72	0/1:22,1:23:35.34:35,0,74	0/1:18,1:18:29.84:30,0,305	0/1:19,1:21:31.70:32,0,490	0/0:40,2:41:2.51:0,3,845	1/1:8,25:34:68.07:765,68,0	0/0:30,0:28:40.14:0,40,181	0/1:22,1:22:10.72:11,0,69	1/1:9,22:30:40.65:421,41,0	1/1:7,13:21:29.92:333,30,0	1/1:8,17:25:39.12:461,39,0	0/1:31,1:31:2.82:3,0,758	0/1:30,0:29:71.22:71,0,776	0/0:40,0:38:43.32:0,43,319	0/1:27,1:27:16.75:17,0,655	0/1:9,2:11:44.47:44,0,262	0/1:19,5:24:46.44:46,0,653	0/1:56,9:59:39.96:40,0,1620	1/1:2,13:15:31.65:359,32,0	1/1:4,13:18:23.90:263,24,0	1/1:11,26:37:56.94:638,57,0	0/0:19,0:19:11.95:0,12,384	0/1:32,1:34:49.37:49,0,221	0/0:22,0:22:18.21:0,18,131	0/0:10,0:10:19.19:0,19,94
chr10	17748730	.	ATG	A	11024.22	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=14.833;DP=988;FS=0.000;HRun=0;HaplotypeScore=236.5376;InbreedingCoeff=0.9984;MQ=53.14;MQ0=15;MQRankSum=-7.330;QD=24.07;ReadPosRankSum=2.215;VQSLOD=4.7600;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:60,0:60:99:0,109,1764	1/1:2,6:8:18.03:203,18,0	0/0:51,0:27:31.66:0,32,375	0/0:51,1:19:31.93:0,32,375	1/1:11,17:29:35.79:414,36,0	1/1:16,24:41:90.11:1069,90,0	1/1:13,17:30:69.02:805,69,0	0/0:25,0:54:68.20:0,68,739	1/1:4,29:33:63.19:764,63,0	1/1:15,30:45:99:1185,102,0	1/1:7,23:30:50.89:618,51,0	0/0:30,1:31:47.86:0,48,1216	0/0:37,2:39:33.93:0,34,1446	0/0:28,0:28:75.26:0,75,1196	1/1:13,21:34:81.22:958,81,0	1/1:13,17:31:74.73:861,75,0	1/1:9,20:30:42.13:504,42,0	1/1:15,8:23:25.08:404,25,0	0/0:20,0:24:34.33:0,34,304	0/0:12,0:29:40.07:0,40,329	0/0:17,0:65:71.82:0,72,651	0/0:27,1:28:32.84:0,33,1021	0/0:30,0:30:48.15:0,48,1242	0/0:33,1:34:41.64:0,42,1092	1/1:14,12:26:48.15:582,48,0	1/1:9,37:47:99:1347,114,0	1/1:8,24:32:63.19:764,63,0	1/1:1,18:19:45.14:546,45,0
chr10	17748756	.	GTA	G	5804.93	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=6.286;DP=1040;FS=6.112;HRun=0;HaplotypeScore=275.2036;InbreedingCoeff=0.9966;MQ=48.61;MQ0=22;MQRankSum=-6.720;QD=27.77;ReadPosRankSum=-1.345;VQSLOD=4.0703;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,114,2179	0/0:8,0:8:15.03:0,15,220	0/0:60,0:27:49.17:0,49,1110	0/0:78,0:20:45.68:0,46,611	0/0:31,0:31:32.96:0,33,474	1/1:3,39:40:99:1129,101,0	1/1:5,29:34:86.89:1133,87,0	0/0:51,0:50:99:0,110,2358	0/0:39,0:39:96.32:0,96,1802	0/0:42,0:42:99:0,114,1514	0/0:25,0:25:48.11:0,48,772	0/0:36,0:36:99:0,105,1791	0/0:46,0:46:99:0,113,2245	0/0:30,0:30:90.20:0,90,1525	1/1:3,39:40:89.69:1050,90,0	1/1:1,34:33:90.01:1216,90,0	0/0:31,0:31:38.43:0,38,686	1/1:10,22:31:38.97:664,39,0	0/0:12,0:10:30.01:0,30,468	0/0:26,0:26:64.28:0,64,1151	0/0:57,0:57:99:0,108,1887	0/0:27,0:27:81.26:0,81,1511	0/0:32,0:32:90.21:0,90,1552	0/0:42,0:42:99:0,118,2165	1/1:1,23:23:48.02:613,48,0	0/0:52,0:52:99:0,137,1817	0/0:33,0:33:66.16:0,66,950	0/0:19,0:19:51.12:0,51,689
chr10	17748771	.	GTC	G	5571.40	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=15.297;DP=1048;FS=5.458;HRun=0;HaplotypeScore=268.6615;InbreedingCoeff=0.9980;MQ=49.72;MQ0=21;MQRankSum=-13.642;QD=25.67;ReadPosRankSum=-0.019;VQSLOD=4.2419;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,128,2262	1/1:2,6:8:18.06:243,18,0	0/0:67,0:33:76.48:0,76,1006	0/0:72,0:24:51.78:0,52,850	1/1:5,25:30:29.31:226,29,0	0/0:46,0:44:75.05:0,75,1063	0/0:34,0:34:72.01:0,72,1093	0/0:49,0:49:99:0,138,2216	0/0:42,0:42:99:0,102,1673	1/1:6,25:31:87.24:1183,87,0	1/1:10,17:27:38.51:375,39,0	0/0:40,0:41:99:0,101,1958	0/0:39,0:39:96.32:0,96,1799	0/0:32,0:32:93.29:0,93,1639	0/0:46,0:44:49.86:0,50,961	0/0:38,0:36:71.14:0,71,1021	1/1:11,15:26:59.45:622,59,0	0/0:32,0:31:23.90:0,24,604	0/0:16,0:16:47.50:0,48,741	0/0:28,0:28:66.17:0,66,1068	0/0:62,0:61:99:0,126,1999	0/0:29,0:29:81.26:0,81,1416	0/0:26,0:26:75.19:0,75,1236	0/0:49,0:49:99:0,132,2196	0/0:25,0:23:26.98:0,27,421	1/1:8,39:47:99:1734,107,0	1/1:6,23:29:60.46:602,60,0	1/1:5,14:19:45.11:587,45,0
chr10	17748796	.	AGT	A	5653.18	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=14.548;DP=1005;FS=3.411;HRun=0;HaplotypeScore=232.3796;InbreedingCoeff=0.9988;MQ=55.48;MQ0=19;MQRankSum=-12.039;QD=25.13;ReadPosRankSum=-0.221;VQSLOD=5.0924;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:60,0:60:99:0,145,2583	1/1:2,7:9:21.02:262,21,0	0/0:53,0:31:74.88:0,75,1130	0/0:48,0:27:69.85:0,70,994	1/1:3,30:33:23.77:323,24,0	0/0:41,0:39:93.32:0,93,1606	0/0:33,0:33:66.23:0,66,1130	0/0:42,0:42:99:0,108,1807	0/0:40,0:40:84.26:0,84,1400	1/1:4,33:36:99:1289,99,0	1/1:7,17:24:29.89:405,30,0	0/0:46,0:46:99:0,129,2170	0/0:42,0:42:99:0,111,1874	0/0:34,0:34:96.24:0,96,1580	0/0:51,0:49:99:0,114,1937	0/0:43,0:41:87.30:0,87,1516	1/1:9,25:32:47.16:586,47,0	0/0:33,0:32:57.31:0,57,1025	0/0:16,0:16:36.09:0,36,550	0/0:24,0:24:66.23:0,66,1129	0/0:56,0:55:99:0,105,1789	0/0:23,0:23:57.18:0,57,962	0/0:23,0:23:63.18:0,63,1036	0/0:47,0:47:99:0,129,2204	0/0:25,0:24:42.06:0,42,731	1/1:6,38:44:99:1514,114,0	1/1:6,23:29:57.14:748,57,0	1/1:3,12:15:39.13:526,39,0
chr10	17750037	.	CT	C	3527.38	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=7.804;DP=619;FS=3.054;HRun=2;HaplotypeScore=70.0505;InbreedingCoeff=0.9965;MQ=85.59;MQ0=1;MQRankSum=-0.613;QD=35.27;ReadPosRankSum=-1.571;VQSLOD=3.5499;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:81.23:0,81,1188	0/0:6,0:6:18.06:0,18,270	0/0:28,0:28:81.27:0,81,1210	0/0:13,0:12:33.11:0,33,482	0/0:24,0:24:72.21:0,72,1018	0/0:23,0:23:69.21:0,69,997	0/0:14,0:14:42.14:0,42,629	1/1:2,28:30:78.24:997,78,0	0/0:19,0:19:57.19:0,57,845	0/0:24,0:24:72.24:0,72,1079	0/0:11,0:11:33.10:0,33,475	0/0:23,0:23:69.22:0,69,1004	0/0:21,0:21:63.19:0,63,906	0/0:25,0:25:75.25:0,75,1118	0/0:21,0:21:63.20:0,63,921	0/0:22,0:22:66.21:0,66,954	0/0:31,0:31:93.29:0,93,1366	0/0:20,0:20:60.20:0,60,898	1/1:0,23:23:69.22:894,69,0	1/1:0,27:27:72.23:935,72,0	1/1:0,20:20:54.18:701,54,0	0/0:16,0:16:48.13:0,48,657	0/0:19,0:19:51.17:0,51,761	0/0:13,0:13:39.12:0,39,564	0/0:33,0:33:99:0,99,1483	0/0:29,0:29:87.29:0,87,1285	0/0:47,0:47:99:0,141,2070	0/0:9,0:9:21.07:0,21,315
chr10	17752245	.	A	AGTGTGT	7019.85	PASS	AB=0.854;AC=49;AF=0.875;AN=56;BaseQRankSum=0.679;DP=676;FS=0.000;HRun=0;HaplotypeScore=186.4426;InbreedingCoeff=0.3103;MQ=60.13;MQ0=5;MQRankSum=-1.951;QD=11.53;ReadPosRankSum=0.019;VQSLOD=3.8907;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:34:9.03:229,9,0	1/1:14,0:14:12.03:235,12,0	0/0:28,0:18:3.01:0,3,60	0/0:38,0:24:5.57:0,6,73	1/1:21,0:21:2.06:335,2,0	0/1:18,2:23:33.55:250,0,34	1/1:24,5:30:6.02:189,6,0	1/1:34,0:34:35.74:398,36,0	1/1:11,0:19:3.01:78,3,0	1/1:32,0:32:33.04:600,33,0	1/1:20,0:20:5.74:165,6,0	1/1:22,2:29:8.55:228,9,0	1/1:13,1:18:18.06:461,18,0	1/1:17,1:25:9.03:234,9,0	1/1:11,10:25:15.05:406,15,0	1/1:18,7:26:24.08:724,24,0	1/1:28,0:28:1.05:347,1,0	1/1:11,1:22:12.04:212,12,0	1/1:19,0:18:23.80:318,24,0	1/1:12,0:19:3.01:78,3,0	0/1:36,0:35:0.08:0,0,0	0/1:11,0:16:0.01:0,0,0	1/1:9,0:15:3.01:71,3,0	1/1:14,0:19:3.01:69,3,0	1/1:12,8:24:15.05:392,15,0	1/1:29,0:29:27.03:542,27,0	1/1:18,0:18:9.92:257,10,0	1/1:9,0:9:9.03:200,9,0
chr10	17752252	.	G	GTGTGTA	6977.46	PASS	AB=0.951;AC=30;AF=0.536;AN=56;BaseQRankSum=6.224;DP=727;FS=3.155;HRun=0;HaplotypeScore=202.3795;InbreedingCoeff=-0.2864;MQ=53.37;MQ0=10;MQRankSum=-6.226;QD=11.73;ReadPosRankSum=5.232;VQSLOD=3.8924;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:39,0:38:99:156,0,213	1/1:5,10:16:17.84:331,18,0	0/0:28,0:14:26.20:0,26,329	0/0:48,0:22:60:0,60,657	1/1:3,24:29:14.26:426,14,0	0/1:22,0:22:99:162,0,201	0/1:28,0:28:99:117,0,209	0/1:34,0:34:75.38:75,0,429	0/1:18,0:18:46.02:46,0,82	1/1:4,36:43:95.25:1342,95,0	1/1:5,16:22:5.74:200,6,0	0/1:27,0:27:99:150,0,121	0/1:22,0:21:99:252,0,148	0/1:26,0:26:99:152,0,131	0/1:26,0:26:26.08:304,0,26	0/1:26,0:25:99:538,0,123	0/1:10,16:29:32.77:439,0,33	0/1:23,0:23:99:140,0,131	0/1:16,0:14:99:124,0,101	0/1:19,0:19:42.23:42,0,105	0/0:37,0:36:32.62:0,33,253	0/0:19,0:18:14.96:0,15,121	0/1:15,0:15:34.39:34,0,56	0/1:22,0:22:34.52:35,0,102	0/1:26,0:25:23.87:282,0,24	1/1:8,24:34:49.67:1060,50,0	0/1:1,20:21:0.85:306,0,1	1/1:2,7:12:11.63:265,12,0
chr10	17752254	.	G	GTGTA	3986.65	PASS	AB=0.986;AC=24;AF=0.429;AN=56;BaseQRankSum=5.281;DP=728;FS=13.426;HRun=0;HaplotypeScore=178.5860;InbreedingCoeff=-0.2986;MQ=52.01;MQ0=13;MQRankSum=-5.719;QD=7.70;ReadPosRankSum=7.997;VQSLOD=0.9026;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:42,0:41:45.34:45,0,219	1/1:14,2:16:17.84:302,18,0	0/0:32,0:13:26.20:0,26,317	0/0:52,0:22:59.23:0,59,624	0/1:28,0:28:45.11:230,0,45	0/1:22,0:22:47.92:48,0,204	0/1:27,0:27:1.56:2,0,213	0/0:34,0:34:72.98:0,73,608	0/1:18,0:18:20.66:21,0,82	0/1:41,1:43:6.51:916,0,7	1/1:21,0:21:5.61:108,6,0	0/1:27,0:27:93.16:93,0,141	0/1:22,0:21:99:138,0,147	0/1:25,0:25:73.12:73,0,133	0/1:26,0:26:48.46:163,0,48	0/1:25,0:24:99:168,0,130	0/1:23,2:25:52.88:266,0,53	0/1:23,0:23:99:163,0,132	0/0:15,0:13:4.57:0,5,172	0/1:19,0:19:16.55:17,0,105	0/0:36,0:35:35.21:0,35,278	0/0:19,0:18:9.90:0,10,125	0/1:15,0:15:31.36:31,0,76	0/0:22,0:22:20.74:0,21,169	0/1:27,0:26:28.89:136,0,29	0/1:31,2:33:55.56:677,0,56	1/1:21,0:21:14.45:199,14,0	0/1:12,1:13:6.34:192,0,6
chr10	17753089	.	T	TC	6391.46	PASS	AB=1.000;AC=37;AF=0.685;AN=54;BaseQRankSum=-11.024;DP=447;FS=8.062;HRun=6;HaplotypeScore=68.5403;InbreedingCoeff=0.8394;MQ=84.97;MQ0=6;MQRankSum=-1.257;QD=20.42;ReadPosRankSum=0.827;VQSLOD=3.8108;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,19:25:39.12:486,39,0	./.	0/0:32,0:22:38.47:0,38,327	0/0:41,0:25:14.44:0,14,184	0/0:11,0:11:11.33:0,11,63	1/1:0,11:11:27.09:338,27,0	1/1:6,21:27:51.13:629,51,0	1/1:12,6:17:33.93:371,34,0	1/1:2,16:18:39.12:491,39,0	0/0:6,0:6:13.98:0,14,67	0/0:13,0:13:11.21:0,11,120	1/1:1,10:11:15.04:178,15,0	1/1:2,12:14:27.08:326,27,0	1/1:2,15:17:24.08:302,24,0	1/1:8,5:12:30.06:330,30,0	1/1:1,10:11:5.89:75,6,0	0/0:21,0:21:30.41:0,30,171	1/1:0,7:7:12.04:151,12,0	1/1:2,6:8:18.06:224,18,0	1/1:3,15:19:39.51:454,40,0	1/1:3,18:21:36.11:441,36,0	1/1:0,21:21:60.19:755,60,0	1/1:3,13:16:26.82:339,27,0	1/1:4,19:23:21.07:264,21,0	1/1:0,11:11:18.06:226,18,0	0/0:7,0:7:14.13:0,14,72	0/1:22,0:22:11.27:11,0,150	0/0:1,0:1:2.90:0,3,16
chr10	17753171	.	GTTCC	G	3727.74	PASS	AB=0.991;AC=24;AF=0.429;AN=56;BaseQRankSum=6.850;DP=585;FS=11.667;HRun=0;HaplotypeScore=169.6964;InbreedingCoeff=0.4135;MQ=59.00;MQ0=5;MQRankSum=-7.700;QD=12.90;ReadPosRankSum=-1.454;VQSLOD=2.5945;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,105,1447	0/1:6,0:6:2.51:60,0,3	0/0:27,0:16:28.98:0,29,293	0/0:15,0:11:4.16:0,4,124	0/1:29,0:29:44:218,0,44	0/0:15,0:16:39.09:0,39,762	0/0:27,0:27:78.05:0,78,1069	1/1:13,11:23:56.92:493,57,0	1/1:18,0:17:16.78:323,17,0	0/1:20,0:20:42.21:171,0,42	1/1:18,0:18:22.53:156,23,0	0/0:15,0:15:38.50:0,39,453	0/0:15,0:15:33.01:0,33,455	0/0:28,0:28:54:0,54,708	0/0:27,0:27:72.08:0,72,1021	0/1:12,1:12:99:101,0,124	0/1:17,0:17:5.12:52,0,5	0/1:11,0:11:24.19:24,0,64	1/1:11,0:11:27:272,27,0	1/1:24,0:24:72.05:766,72,0	1/1:26,0:26:59.89:596,60,0	0/0:31,0:31:78.49:0,78,821	0/0:29,0:29:79.66:0,80,1150	0/0:25,0:25:45.15:0,45,863	0/1:23,0:23:99:117,0,175	1/1:20,0:20:2.48:199,2,0	1/1:21,0:21:19.43:115,19,0	0/1:8,0:8:61.78:65,0,62
chr10	17753175	.	C	CTCCTG	9848.34	PASS	AB=1.000;AC=24;AF=0.429;AN=56;BaseQRankSum=10.671;DP=590;FS=14.734;HRun=0;HaplotypeScore=167.5925;InbreedingCoeff=0.3987;MQ=58.92;MQ0=5;MQRankSum=-12.370;QD=33.84;ReadPosRankSum=-2.522;VQSLOD=2.9740;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,108,2186	1/1:0,6:6:18.06:512,18,0	0/0:24,0:15:44.42:0,44,654	0/0:14,0:10:18.47:0,18,287	1/1:3,19:29:80.99:1982,81,0	0/0:14,0:15:36.23:0,36,861	0/0:27,0:27:81.28:0,81,1701	0/1:22,0:21:99:112,0,518	0/1:11,0:16:80.71:81,0,485	1/1:3,8:20:57.18:1374,57,0	1/1:3,12:20:52.42:1427,52,0	0/0:16,0:16:38.72:0,39,682	0/0:18,0:18:36.11:0,36,750	0/0:29,0:29:54.18:0,54,1161	0/0:26,0:26:75.24:0,75,1459	0/1:13,0:12:39.93:40,0,509	1/1:4,1:19:24.08:535,24,0	0/1:10,0:10:24.15:24,0,186	0/1:11,0:12:48.97:49,0,212	0/1:17,0:25:99:121,0,904	0/1:19,0:24:99:99,0,805	0/0:31,0:30:79.36:0,79,1580	0/0:31,0:31:87.28:0,87,1762	0/0:25,0:25:63.09:0,63,1227	0/1:23,0:23:75.43:75,0,814	1/1:4,7:22:57.19:1487,57,0	1/1:3,10:21:51.16:1379,51,0	1/1:1,5:8:6.08:551,6,0
chr10	17753179	.	C	CTG	3618.08	PASS	AB=0.895;AC=18;AF=0.321;AN=56;BaseQRankSum=13.818;DP=583;FS=18.423;HRun=0;HaplotypeScore=156.2337;InbreedingCoeff=0.7745;MQ=59.18;MQ0=4;MQRankSum=-11.389;QD=19.88;ReadPosRankSum=0.770;VQSLOD=2.8947;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,110,1581	1/1:4,0:6:17.70:149,18,0	0/0:24,0:15:35.10:0,35,545	0/0:13,0:9:17.11:0,17,258	1/1:23,4:29:55.78:758,56,0	0/0:16,0:16:41.63:0,42,607	0/0:31,0:31:93.18:0,93,1327	0/0:23,0:22:56.33:0,56,709	0/0:17,0:16:25.13:0,25,420	1/1:11,6:17:51.02:567,51,0	1/1:15,4:19:28.34:537,28,0	0/0:16,0:16:41.96:0,42,500	0/0:17,0:17:33.10:0,33,487	0/0:29,0:29:54.18:0,54,813	0/0:26,0:26:68.22:0,68,840	0/0:11,0:13:36.02:0,36,459	1/1:12,5:17:4.70:146,5,0	0/0:5,0:13:11.01:0,11,187	0/0:10,0:10:1.84:0,2,338	0/1:25,1:26:69.40:69,0,579	0/1:19,5:24:86.72:87,0,585	0/0:31,0:30:79.44:0,79,1130	0/0:32,0:32:87.27:0,87,1219	0/0:25,0:25:66.20:0,66,916	0/0:18,0:23:63.15:0,63,799	1/1:14,5:19:44.32:539,44,0	1/1:15,3:18:42.07:466,42,0	1/1:2,2:7:21.07:299,21,0
chr10	17753183	.	T	TG	2434.32	PASS	AB=0.741;AC=10;AF=0.179;AN=56;BaseQRankSum=12.524;DP=592;FS=15.615;HRun=0;HaplotypeScore=152.1771;InbreedingCoeff=0.0619;MQ=56.93;MQ0=4;MQRankSum=-11.695;QD=15.91;ReadPosRankSum=3.905;VQSLOD=4.6140;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,110,1483	0/1:2,4:6:1.18:147,0,1	0/0:19,0:10:27.08:0,27,362	0/0:11,0:8:14.92:0,15,210	0/1:10,18:28:40.75:631,0,41	0/0:18,0:18:47.35:0,47,608	0/0:32,0:32:88.16:0,88,1187	0/0:25,0:24:66.60:0,67,841	0/1:17,0:16:5.34:5,0,377	0/1:11,8:19:79.80:333,0,80	0/1:9,11:20:58.58:421,0,59	0/0:15,0:15:39.12:0,39,520	0/0:16,0:16:30.09:0,30,417	0/0:29,0:29:54.18:0,54,752	0/0:27,0:27:75.18:0,75,925	0/0:16,0:15:38.83:0,39,415	0/1:19,0:19:99:109,0,160	0/0:14,0:14:17.89:0,18,201	0/0:10,0:10:29.29:0,29,345	0/0:26,0:26:72.70:0,73,772	0/0:23,1:24:57.99:0,58,702	0/0:31,0:30:90.26:0,90,1201	0/0:32,0:32:93.28:0,93,1253	0/0:26,0:26:66.66:0,67,876	0/0:27,0:27:71.57:0,72,713	0/1:12,7:19:99:283,0,129	0/1:8,10:18:8.12:440,0,8	1/1:5,2:7:1.29:202,1,0
chr10	17753228	.	T	TTCTC	4414.82	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=-1.974;DP=605;FS=1.788;HRun=0;HaplotypeScore=141.1576;InbreedingCoeff=0.8024;MQ=57.89;MQ0=4;MQRankSum=4.019;QD=20.34;ReadPosRankSum=1.372;VQSLOD=4.8628;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:32,2:34:92.76:1103,93,0	0/0:5,0:5:5.87:0,6,41	0/0:20,0:15:27.69:0,28,330	0/0:21,0:9:8.20:0,8,197	0/0:25,0:25:43.68:0,44,351	0/0:21,0:21:57.02:0,57,666	0/0:27,0:27:52.18:0,52,523	0/0:20,0:18:42.03:0,42,392	0/0:17,0:16:39.02:0,39,411	0/0:21,0:21:47.94:0,48,520	0/0:16,0:16:35.92:0,36,346	1/1:13,1:14:38.95:492,39,0	1/1:4,17:24:3.01:77,3,0	1/1:7,27:34:3.01:77,3,0	0/1:26,0:26:99:242,0,210	0/0:16,0:15:44.87:0,45,489	0/0:18,0:18:44.73:0,45,371	0/0:27,0:27:40.03:0,40,513	0/0:15,0:15:39:0,39,355	0/0:18,0:18:35.93:0,36,282	0/0:14,0:14:30.24:0,30,291	1/1:1,26:28:47.32:470,47,0	1/1:24,4:28:72.07:1065,72,0	1/1:24,5:29:68.74:889,69,0	0/0:27,0:27:73.71:0,74,762	0/0:24,0:24:28.84:0,29,463	0/0:27,0:26:65.99:0,66,612	0/0:9,0:8:7.71:0,8,139
chr10	17753873	.	C	CTTT	9864.31	PASS	AB=0.752;AC=39;AF=0.696;AN=56;BaseQRankSum=2.760;DP=529;FS=0.434;HRun=9;HaplotypeScore=89.2303;InbreedingCoeff=0.7163;MQ=71.76;MQ0=1;MQRankSum=-1.954;QD=23.10;ReadPosRankSum=-0.522;VQSLOD=2.8885;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,0:26:68.34:528,68,0	1/1:1,11:13:30.08:556,30,0	0/1:22,0:21:12.79:13,0,311	0/0:4,0:3:2.92:0,3,17	1/1:3,35:41:94.47:1679,94,0	0/0:12,0:12:33.10:0,33,417	0/0:12,0:12:30.07:0,30,362	1/1:5,0:19:24.03:83,24,0	1/1:1,0:11:26.90:207,27,0	1/1:2,21:25:63.64:1121,64,0	1/1:3,29:34:80.46:1447,80,0	1/1:2,0:10:13.20:95,13,0	1/1:0,0:10:26.90:207,27,0	1/1:1,0:18:41.84:323,42,0	0/0:18,0:18:45.12:0,45,569	0/0:15,0:15:42.11:0,42,531	1/1:3,16:19:24.08:473,24,0	0/0:20,0:20:48.11:0,48,592	0/1:4,0:18:32.65:33,0,51	1/1:3,0:33:36.60:92,37,0	0/1:5,0:9:17.29:17,0,32	1/1:5,0:25:60.38:444,60,0	1/1:3,0:18:32.87:253,33,0	1/1:2,0:16:40.67:303,41,0	0/0:21,0:21:63.17:0,63,765	1/1:2,16:19:48.06:767,48,0	1/1:0,14:16:20.60:398,21,0	1/1:3,14:19:42.14:829,42,0
chr10	17754899	.	GC	G	4740.86	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=12.345;DP=700;FS=9.130;HRun=1;HaplotypeScore=66.6388;InbreedingCoeff=0.9999;MQ=60.70;MQ0=1;MQRankSum=2.698;QD=38.86;ReadPosRankSum=-1.449;VQSLOD=4.4209;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,129,2053	0/0:16,0:16:48.14:0,48,737	0/0:28,0:24:66.19:0,66,1026	0/0:25,0:21:57.15:0,57,878	0/0:24,0:24:72.25:0,72,1147	0/0:11,0:11:33.11:0,33,528	0/0:37,0:37:99:0,111,1772	1/1:0,32:32:93.27:1262,93,0	1/1:0,19:19:54.18:755,54,0	0/0:16,0:16:48.15:0,48,721	0/0:25,0:25:75.26:0,75,1197	0/0:22,0:22:66.20:0,66,1000	0/0:22,0:22:66.23:0,66,1053	0/0:26,0:26:78.27:0,78,1247	0/0:31,0:31:93.30:0,93,1460	0/0:24,0:24:72.25:0,72,1151	0/0:49,0:49:99:0,138,2205	0/0:34,0:34:99:0,102,1630	1/1:1,21:22:60.17:794,60,0	1/1:0,15:15:45.15:629,45,0	1/1:0,34:34:93.31:1301,93,0	0/0:16,0:16:48.15:0,48,744	0/0:19,0:19:57.19:0,57,907	0/0:25,0:25:69.22:0,69,1080	0/0:19,0:19:57.19:0,57,905	0/0:30,0:30:90.31:0,90,1436	0/0:20,0:20:60.19:0,60,935	0/0:14,0:14:42.13:0,42,640
chr10	17755137	.	TTGTATTCTGTAA	T	8494.98	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=13.361;DP=455;FS=3.298;HRun=0;HaplotypeScore=172.3584;InbreedingCoeff=0.9484;MQ=78.27;MQ0=1;MQRankSum=-11.330;QD=91.34;ReadPosRankSum=-0.331;VQSLOD=4.5062;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:75.26:0,75,4575	0/0:6,0:6:18.06:0,18,1102	0/0:16,0:16:48.13:0,48,2118	0/0:11,0:11:33.08:0,33,1572	0/0:29,0:29:87.28:0,87,5303	0/0:22,0:21:66.23:0,66,3963	0/0:13,0:13:39.13:0,39,2295	1/1:0,23:23:65.98:1757,66,0	1/1:0,17:17:45.15:1743,45,0	0/0:20,0:20:60.20:0,60,3476	0/0:32,0:32:92.72:0,93,5341	0/0:10,0:10:30.09:0,30,1743	0/0:11,0:11:33.09:0,33,1729	0/0:4,0:4:12.04:0,12,706	0/0:15,0:15:45.14:0,45,2638	0/0:14,0:14:42.14:0,42,2657	0/0:19,0:19:57.20:0,57,3532	0/0:8,0:8:24.08:0,24,1494	1/1:0,16:16:48.10:1692,48,0	1/1:0,32:32:87.19:3069,87,0	1/1:0,5:5:5.27:234,5,0	0/0:9,0:9:27.09:0,27,1484	0/0:12,0:12:36.08:0,36,1865	0/0:12,0:12:36.11:0,36,1933	0/0:24,0:24:72.25:0,72,4360	0/0:29,0:29:87.30:0,87,5270	0/0:18,0:17:51.16:0,51,2854	0/0:3,0:3:9.03:0,9,573
chr10	17755670	.	AGT	A	2426.53	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=6.586;DP=580;FS=11.155;HRun=0;HaplotypeScore=75.0545;InbreedingCoeff=0.9724;MQ=61.55;MQ0=8;MQRankSum=-0.130;QD=27.26;ReadPosRankSum=-3.166;VQSLOD=3.1865;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,123,2023	0/0:5,0:5:15.05:0,15,251	0/0:35,0:16:39.12:0,39,599	0/0:19,0:9:7.30:0,7,217	0/0:32,0:32:93.27:0,93,1459	0/0:14,0:14:42.07:0,42,620	0/0:23,0:23:57.16:0,57,892	1/1:4,23:27:69.21:863,69,0	0/0:12,0:12:36.12:0,36,602	0/0:22,0:22:63.21:0,63,1015	0/0:17,0:17:51.16:0,51,828	0/0:13,0:13:36.12:0,36,601	0/0:13,0:13:36.12:0,36,594	0/0:15,0:15:42.14:0,42,702	0/0:24,0:24:66.23:0,66,1096	0/0:20,0:20:48.16:0,48,786	0/0:33,0:33:93.32:0,93,1542	0/0:24,1:25:27.99:0,28,973	1/1:4,17:21:50.80:631,51,0	1/1:2,17:19:45.13:558,45,0	1/1:2,20:22:41.95:534,42,0	0/0:10,0:10:27.09:0,27,452	0/0:11,0:11:33.11:0,33,549	0/0:17,0:17:46.71:0,47,753	0/0:14,1:14:39.13:0,39,648	0/0:28,0:28:69.21:0,69,1106	0/0:30,0:30:78.27:0,78,1305	0/0:13,0:13:33.11:0,33,524
chr10	17756528	.	AT	A	4315.55	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=13.205;DP=492;FS=3.842;HRun=7;HaplotypeScore=47.1691;InbreedingCoeff=0.9989;MQ=78.46;MQ0=0;MQRankSum=-1.861;QD=27.49;ReadPosRankSum=2.558;VQSLOD=5.5454;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:39.12:0,39,478	1/1:0,13:13:36.08:367,36,0	0/0:13,0:13:27.09:0,27,337	0/0:12,0:12:33.07:0,33,385	1/1:0,12:12:33.07:337,33,0	0/0:15,0:15:42.13:0,42,528	0/0:14,0:14:36.12:0,36,453	0/0:27,0:27:72.22:0,72,895	0/0:15,0:15:39.12:0,39,491	1/1:1,28:29:84.19:857,84,0	1/1:4,24:28:66.14:673,66,0	0/0:13,0:13:33.09:0,33,402	0/0:20,0:20:48.15:0,48,603	0/0:14,0:14:33.10:0,33,411	0/0:12,0:12:36.10:0,36,440	0/0:18,0:18:48.15:0,48,604	1/1:2,16:18:45.10:459,45,0	0/0:19,0:19:54.17:0,54,676	0/0:25,0:25:57.18:0,57,717	0/0:28,0:28:81.26:0,81,1019	0/0:14,0:14:42.12:0,42,515	0/0:18,0:18:51.16:0,51,642	0/0:20,0:20:54.17:0,54,679	0/0:9,0:9:24.08:0,24,302	0/0:16,0:16:42.13:0,42,528	1/1:0,20:20:60.14:612,60,0	1/1:1,25:26:75.17:765,75,0	1/1:0,11:11:24.05:245,24,0
chr10	17757943	.	AT	A	5243.44	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=12.120;DP=398;FS=3.576;HRun=7;HaplotypeScore=39.1148;InbreedingCoeff=0.9646;MQ=62.78;MQ0=3;MQRankSum=1.447;QD=23.94;ReadPosRankSum=2.260;VQSLOD=4.6437;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:84.27:0,84,1050	1/1:1,4:5:12.03:122,12,0	0/0:6,0:5:9.03:0,9,109	0/0:8,0:7:12.04:0,12,142	1/1:2,19:21:54.12:549,54,0	1/1:0,13:13:36.08:367,36,0	1/1:1,7:8:15.03:153,15,0	0/0:27,0:27:72.22:0,72,886	1/1:0,4:4:12.03:122,12,0	1/1:5,15:19:42.09:429,42,0	1/1:0,15:15:45.10:457,45,0	0/0:11,0:11:30.09:0,30,372	0/0:16,0:15:45.13:0,45,552	0/0:4,0:4:9.03:0,9,112	1/1:1,11:11:30.07:305,30,0	1/1:2,8:10:18.04:184,18,0	1/1:5,22:27:56.82:581,57,0	1/1:2,21:23:54.02:536,54,0	0/0:20,0:18:51.15:0,51,627	0/0:24,0:24:66.21:0,66,826	0/0:7,0:7:21.07:0,21,264	0/0:6,0:6:15.05:0,15,189	0/0:9,0:9:27.08:0,27,327	0/0:11,0:11:27:0,27,303	1/1:2,12:14:36.08:367,36,0	1/1:2,17:17:45.10:458,45,0	1/1:2,13:15:33.07:337,33,0	1/1:3,10:13:27.06:275,27,0
chr10	17758467	.	G	GTGTC	35287.76	PASS	AB=1.000;AC=53;AF=0.946;AN=56;BaseQRankSum=-8.030;DP=837;FS=1.623;HRun=0;HaplotypeScore=118.7268;InbreedingCoeff=0.6517;MQ=72.91;MQ0=3;MQRankSum=-5.602;QD=44.05;ReadPosRankSum=6.885;VQSLOD=4.9904;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,64:78:99:3465,138,0	1/1:1,10:11:21.07:529,21,0	0/0:34,0:28:36.76:0,37,686	0/1:34,0:27:16.03:16,0,313	1/1:4,16:21:26.75:679,27,0	1/1:4,22:27:57.20:1435,57,0	1/1:7,17:24:42.14:1035,42,0	1/1:13,20:34:59.92:990,60,0	1/1:2,26:29:63.22:1586,63,0	1/1:2,27:30:78.24:1848,78,0	1/1:1,17:19:33.09:830,33,0	1/1:7,22:30:57.20:1426,57,0	1/1:8,22:30:53.89:1347,54,0	1/1:3,31:34:87.30:2169,87,0	1/1:9,28:38:69.24:1736,69,0	1/1:3,20:23:48.16:1208,48,0	1/1:7,26:34:60.21:1510,60,0	1/1:3,26:27:63.22:1586,63,0	1/1:4,7:12:23.97:380,24,0	1/1:6,12:19:27.09:680,27,0	1/1:13,25:42:54.18:1344,54,0	1/1:8,29:38:62.65:1564,63,0	1/1:3,15:21:20.17:956,20,0	1/1:4,34:40:63.22:1585,63,0	1/1:8,29:38:63.22:1578,63,0	1/1:1,26:28:78.15:1771,78,0	1/1:2,23:26:57.20:1432,57,0	1/1:2,8:10:24.08:604,24,0
chr10	17759856	.	C	CGT	4028.20	PASS	AB=0.705;AC=11;AF=0.196;AN=56;BaseQRankSum=-1.130;DP=763;FS=1.871;HRun=0;HaplotypeScore=249.5064;InbreedingCoeff=0.4830;MQ=53.32;MQ0=3;MQRankSum=1.665;QD=20.04;ReadPosRankSum=1.450;VQSLOD=3.7838;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:24.03:0,24,318	0/1:4,5:9:3.65:209,0,4	0/0:21,0:11:24.08:0,24,312	0/0:26,0:13:34.46:0,34,352	1/1:12,9:20:26.55:408,27,0	0/0:30,0:30:56.28:0,56,507	0/0:24,0:24:49.05:0,49,414	0/0:38,0:38:81.07:0,81,937	0/0:32,0:32:35.28:0,35,530	0/1:37,13:51:53.65:846,0,54	1/1:12,6:18:0.29:236,0,0	0/0:29,0:29:23.63:0,24,227	0/0:37,0:37:56.98:0,57,597	0/0:21,0:21:18:0,18,183	0/0:37,0:37:51.46:0,51,341	0/0:27,0:27:57.21:0,57,324	0/1:16,13:29:7.95:614,0,8	0/0:30,0:30:16.70:0,17,434	0/0:13,0:12:21.03:0,21,262	0/0:38,0:38:15.02:0,15,199	0/0:17,0:16:11.37:0,11,154	0/0:36,0:36:30.06:0,30,367	0/0:30,0:30:15.05:0,15,199	0/0:21,0:21:21.07:0,21,277	0/0:25,0:25:46.71:0,47,320	1/1:10,19:29:28.62:841,29,0	0/1:20,12:32:3.33:653,0,3	0/1:6,5:11:7.13:221,0,7
chr10	17759861	.	GTA	G	1015.28	PASS	AB=0.992;AC=11;AF=0.196;AN=56;BaseQRankSum=-2.928;DP=819;FS=7.937;HRun=0;HaplotypeScore=268.6253;InbreedingCoeff=-0.0630;MQ=52.46;MQ0=7;MQRankSum=2.228;QD=4.08;ReadPosRankSum=-2.874;VQSLOD=1.1387;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:26.27:0,26,193	0/1:11,0:11:21.11:34,0,21	0/0:28,0:11:14.14:0,14,280	0/0:33,0:13:22.35:0,22,302	1/1:21,0:20:4:98,4,0	0/0:30,0:30:67.58:0,68,628	0/0:24,0:24:60.06:0,60,615	0/0:42,0:41:16.36:0,16,392	0/0:32,0:32:20.65:0,21,214	0/1:45,4:49:65.86:573,0,66	0/1:18,0:18:17.06:37,0,17	0/0:30,0:30:12.36:0,12,94	0/0:42,0:42:29.74:0,30,124	0/0:23,0:23:7.75:0,8,55	0/0:35,0:35:81.15:0,81,831	0/0:27,0:27:66.03:0,66,685	0/1:29,0:29:15.10:15,0,78	0/0:31,0:32:37.51:0,38,723	0/1:14,0:12:7.78:8,0,149	0/0:40,0:40:14.57:0,15,108	0/1:32,0:31:8.11:8,0,108	0/0:43,0:43:27.82:0,28,220	0/0:31,0:31:14.80:0,15,119	0/0:21,0:21:11.45:0,11,121	0/0:25,0:25:57.10:0,57,609	0/1:30,0:30:21.05:134,0,21	0/1:34,0:33:99:152,0,107	0/1:11,0:11:14.87:99,0,15
chr10	17759863	.	ATGTGTG	A	4226.29	PASS	AB=0.771;AC=22;AF=0.393;AN=56;BaseQRankSum=-8.451;DP=848;FS=4.065;HRun=0;HaplotypeScore=305.1240;InbreedingCoeff=0.8253;MQ=52.46;MQ0=7;MQRankSum=-3.364;QD=10.78;ReadPosRankSum=-3.933;VQSLOD=2.7345;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:18,13:32:18.03:277,18,0	0/0:11,0:11:21.07:0,21,542	0/0:29,0:11:13.73:0,14,338	0/0:35,0:14:15.05:0,15,372	0/0:22,0:21:34.89:0,35,675	0/0:12,0:32:48.15:0,48,1104	0/0:9,0:26:45.14:0,45,1104	1/1:18,27:42:47.55:1172,48,0	1/1:11,22:33:10.84:506,11,0	0/0:49,0:49:99:0,110,2480	0/0:18,0:18:27.07:0,27,649	1/1:4,28:32:18.53:363,19,0	1/1:1,39:42:51.16:996,51,0	1/1:2,22:24:12.04:254,12,0	0/0:6,0:36:69.24:0,69,1695	0/0:4,0:27:60.21:0,60,1512	0/0:31,0:31:50.95:0,51,1269	0/0:18,0:32:34.22:0,34,1394	0/1:11,0:9:13.98:105,0,14	1/1:5,35:41:0.76:1,1,0	1/1:31,2:32:15.62:230,16,0	1/1:9,33:43:2.89:64,3,0	0/1:5,26:32:0.13:0,0,0	1/1:14,9:24:15.03:258,15,0	0/0:8,0:27:57.16:0,57,1282	0/0:33,0:33:84.23:0,84,1911	0/0:36,0:35:56.59:0,57,1753	0/0:11,0:11:22.47:0,22,594
chr10	17759929	.	ATG	A	6258.35	PASS	AB=0.561;AC=15;AF=0.268;AN=56;BaseQRankSum=11.012;DP=1073;FS=0.699;HRun=0;HaplotypeScore=259.7250;InbreedingCoeff=0.9103;MQ=50.13;MQ0=25;MQRankSum=0.749;QD=24.93;ReadPosRankSum=0.572;VQSLOD=4.6372;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:19.93:0,20,575	1/1:2,8:10:6.02:80,6,0	0/0:39,0:7:8.82:0,9,104	0/0:48,2:12:17.94:0,18,218	1/1:5,28:33:48.14:638,48,0	0/0:30,0:30:72.67:0,73,1147	0/0:25,0:25:54.16:0,54,895	0/0:58,0:46:99:0,117,1855	0/0:36,0:36:53.54:0,54,880	1/1:7,44:50:99:1675,135,0	1/1:3,26:29:33.11:439,33,0	0/0:36,0:36:66.19:0,66,1082	0/0:43,0:43:75.07:0,75,1174	0/0:38,0:38:78.07:0,78,1244	0/0:44,0:44:99:0,99,1626	0/0:45,0:45:99:0,117,1922	1/1:11,24:35:76.45:994,76,0	0/0:45,0:45:85.82:0,86,1678	0/0:28,0:20:45.78:0,46,710	0/0:48,0:48:38.96:0,39,673	0/0:76,0:74:32.75:0,33,583	0/0:37,0:37:63.22:0,63,1089	0/0:42,0:42:72.23:0,72,1215	0/0:31,0:31:60.18:0,60,1004	0/0:33,0:33:75.23:0,75,1232	1/1:5,32:37:96.28:1234,96,0	1/1:3,30:33:71.80:911,72,0	0/1:5,18:23:2.76:286,0,3
chr10	17760228	.	ATGTGTGTGTATG	A	9891.42	PASS	AB=0.628;AC=18;AF=0.321;AN=56;BaseQRankSum=12.762;DP=1248;FS=11.751;HRun=0;HaplotypeScore=479.9705;InbreedingCoeff=0.6093;MQ=50.72;MQ0=25;MQRankSum=-6.313;QD=20.19;ReadPosRankSum=-3.836;VQSLOD=0.9519;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:52.54:0,53,2672	1/1:2,15:17:14.85:358,15,0	0/0:49,0:21:45.11:0,45,1419	0/0:47,0:25:51.58:0,52,1345	0/1:3,30:33:1.05:2,0,1	0/0:25,0:25:56.62:0,57,2598	0/0:40,0:35:66.21:0,66,2805	0/1:49,0:50:99:325,0,1049	0/0:64,0:64:99:0,163,7579	1/1:6,65:70:99:4889,165,0	0/1:2,27:29:0.81:1,0,1	0/0:65,0:65:99:0,177,8352	0/0:56,0:56:99:0,158,8116	0/0:59,0:59:99:0,150,7434	0/0:68,0:68:99:0,177,8834	0/0:60,0:60:99:0,154,7897	1/1:12,6:18:11.62:436,12,0	0/0:37,0:37:61.39:0,61,3287	0/1:13,0:14:6.93:7,0,642	0/1:12,0:45:99:140,0,964	0/1:41,0:87:99:187,0,1340	0/0:52,0:52:99:0,135,6306	0/0:31,0:31:62.85:0,63,3117	0/0:36,0:36:84.04:0,84,3888	0/0:30,0:30:83.92:0,84,3602	1/1:1,42:43:99:2629,108,0	1/1:3,39:42:17.57:583,18,0	1/1:8,0:10:27.04:333,27,0
chr10	17760238	.	ATG	A	1099.81	PASS	AB=1.000;AC=12;AF=0.222;AN=54;BaseQRankSum=14.282;DP=1242;FS=0.000;HRun=0;HaplotypeScore=331.6482;InbreedingCoeff=0.7193;MQ=50.08;MQ0=28;MQRankSum=-9.218;QD=4.21;ReadPosRankSum=1.538;VQSLOD=1.8387;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:39:58.99:0,59,1007	1/1:16,0:16:5.22:44,5,0	0/0:44,1:17:50.57:0,51,698	0/0:40,0:20:42.03:0,42,633	0/1:30,0:30:0.39:0,0,0	0/0:26,0:26:57.16:0,57,957	0/0:43,0:38:80.12:0,80,1229	0/0:66,0:48:66.60:0,67,556	0/0:61,0:61:99:0,159,2598	1/1:65,1:65:99:728,123,0	0/1:28,0:28:0.15:0,0,0	0/0:67,0:67:99:0,180,2916	0/0:57,1:58:99:0,126,2660	0/0:56,0:58:99:0,153,2568	0/0:73,0:73:99:0,189,3163	0/0:63,0:63:99:0,169,2788	0/1:19,0:19:2.95:38,0,3	0/0:35,1:36:45.28:0,45,1302	0/1:21,0:13:47.22:47,0,61	0/0:48,0:48:27.36:0,27,105	0/0:85,4:84:34.05:0,34,145	0/0:50,0:50:99:0,129,2131	0/0:34,0:34:69.21:0,69,1137	0/0:38,0:38:76.35:0,76,1371	0/0:33,0:33:85.17:0,85,1417	1/1:42,0:42:50.76:325,51,0	1/1:39,0:39:14.24:74,14,0	./.
chr10	17760267	.	ATGTATG	A	3519.95	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=7.836;DP=1217;FS=8.213;HRun=0;HaplotypeScore=371.8766;InbreedingCoeff=0.9683;MQ=50.56;MQ0=30;MQRankSum=-7.894;QD=19.45;ReadPosRankSum=-6.965;VQSLOD=1.3542;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:37.34:0,37,1531	0/0:18,0:18:30.10:0,30,881	0/0:49,0:28:50.83:0,51,1053	0/0:41,0:17:32.49:0,32,557	0/0:30,0:29:27:0,27,870	0/0:22,0:22:18.06:0,18,605	0/0:35,0:33:54.05:0,54,1566	1/1:45,8:39:53.75:930,54,0	0/0:59,0:59:99:0,150,4405	0/0:76,0:74:99:0,173,4656	0/0:40,0:40:69.07:0,69,2314	0/0:66,0:66:99:0,153,4113	0/0:70,0:69:99:0,178,5170	0/0:60,0:60:99:0,150,4319	0/0:77,0:74:99:0,129,3566	0/0:70,0:68:99:0,114,3228	0/0:25,0:25:46.85:0,47,1499	0/0:31,0:31:61.64:0,62,1890	1/1:16,4:14:29.89:530,30,0	1/1:14,32:46:75.26:1589,75,0	1/1:57,5:56:28.95:472,29,0	0/0:46,0:46:99:0,102,2823	0/0:34,0:34:69.69:0,70,2184	0/0:33,0:33:63.20:0,63,1777	0/0:32,0:32:84.21:0,84,2475	0/0:45,0:44:99:0,105,3231	0/0:35,0:35:33.11:0,33,1004	0/0:3,0:3:6.02:0,6,202
chr10	17760281	.	GTA	G	330.69	PASS	AB=0.995;AC=5;AF=0.089;AN=56;BaseQRankSum=10.301;DP=1233;FS=10.294;HRun=0;HaplotypeScore=307.5805;InbreedingCoeff=0.2019;MQ=50.95;MQ0=29;MQRankSum=-7.999;QD=1.89;ReadPosRankSum=-3.760;VQSLOD=0.4509;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:38:67.34:0,67,1129	0/0:19,0:19:32.53:0,33,564	0/0:50,0:25:74.94:0,75,1140	0/0:45,1:20:42.25:0,42,788	0/0:31,0:30:48.15:0,48,868	0/0:19,0:19:18.06:0,18,347	0/0:38,0:36:58.47:0,58,974	0/1:47,0:36:99:128,0,434	0/0:59,0:59:99:0,174,3066	0/0:83,0:79:99:0,212,3516	0/0:39,0:39:72.23:0,72,1350	0/0:63,1:64:99:0,183,3034	0/0:71,0:70:99:0,205,3681	0/0:59,0:59:99:0,162,2940	0/0:83,0:80:99:0,128,2201	0/0:68,1:67:99:0,114,1998	0/0:23,0:23:53.60:0,54,1004	0/0:37,1:37:92.86:0,93,1619	0/1:27,0:19:56.35:56,0,145	1/1:39,0:39:2.62:209,3,0	0/1:61,1:55:49.62:50,0,137	0/0:45,0:45:99:0,135,2356	0/0:31,0:31:81.26:0,81,1511	0/0:30,0:30:72.20:0,72,1274	0/0:34,0:34:99:0,102,1789	0/0:48,1:47:99:0,123,2246	0/0:35,0:35:36.12:0,36,686	0/0:4,0:4:8.52:0,9,125
chr10	17760330	.	GTA	G	1801.69	PASS	AB=0.959;AC=9;AF=0.167;AN=54;BaseQRankSum=0.162;DP=1162;FS=7.817;HRun=0;HaplotypeScore=279.0725;InbreedingCoeff=0.8704;MQ=53.63;MQ0=15;MQRankSum=0.914;QD=8.08;ReadPosRankSum=2.181;VQSLOD=1.7616;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,1:36:8.65:0,9,851	0/0:21,0:21:11.98:0,12,208	0/0:38,0:24:53.59:0,54,750	0/0:38,0:26:53.88:0,54,756	0/0:34,0:34:54.18:0,54,935	./.	1/1:1,21:23:37.85:488,38,0	0/0:60,0:52:99:0,108,1054	0/0:66,0:66:99:0,177,2761	0/0:71,0:71:99:0,166,2714	0/0:37,0:37:66.21:0,66,1110	0/0:56,0:56:99:0,147,2423	0/0:69,0:69:99:0,190,3052	0/0:57,0:57:99:0,150,2359	0/1:67,3:67:0:0,0,0	1/1:66,4:67:5.21:79,5,0	0/0:24,1:24:32.82:0,33,569	1/1:14,16:29:58.02:728,58,0	0/0:19,0:18:35.22:0,35,308	0/0:32,0:31:6:0,6,68	0/0:47,0:47:22.59:0,23,282	0/0:44,0:44:99:0,120,1957	0/0:34,0:34:81.22:0,81,1292	0/0:34,0:34:72.19:0,72,1180	1/1:14,16:30:48.09:656,48,0	0/0:48,0:46:99:0,110,1589	0/0:31,0:31:53.29:0,53,790	0/0:7,0:7:14.51:0,15,188
chr10	17760336	.	ATATGTGTGTATG	A	2936.97	PASS	AB=0.933;AC=15;AF=0.278;AN=54;BaseQRankSum=6.029;DP=1124;FS=18.134;HRun=0;HaplotypeScore=407.1822;InbreedingCoeff=0.4157;MQ=52.59;MQ0=21;MQRankSum=-4.599;QD=6.66;ReadPosRankSum=-2.444;VQSLOD=0.5964;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:35,0:35:2.70:3,0,1126	0/0:23,0:23:11.45:0,11,206	0/0:31,0:20:53.60:0,54,750	0/0:33,0:21:34.06:0,34,723	0/0:34,0:33:48.04:0,48,695	./.	1/1:25,0:24:32.79:545,33,0	0/0:61,0:47:99:0,107,1035	0/0:63,0:63:99:0,178,3794	0/1:70,0:70:99:204,0,1625	0/0:35,0:35:47.22:0,47,851	0/0:53,0:53:99:0,147,3098	0/0:65,0:65:99:0,192,3830	0/0:52,0:52:99:0,150,3225	0/1:7,59:63:0:0,0,0	1/1:9,63:69:5.64:79,6,0	0/0:27,0:26:28.60:0,29,449	1/1:25,0:27:57.38:781,57,0	0/1:23,0:20:95.48:95,0,211	0/1:27,0:26:6.98:7,0,37	0/0:59,0:54:18.40:0,18,327	0/0:40,0:40:99:0,120,2490	0/0:32,0:32:80.82:0,81,1636	0/0:33,0:33:72.19:0,72,1569	1/1:25,0:25:60.40:1115,60,0	0/1:44,0:41:99:242,0,1016	0/1:26,0:26:32.56:33,0,514	0/0:6,0:6:12.11:0,12,94
chr10	17760356	.	ATG	A	3687.24	PASS	AB=0.841;AC=15;AF=0.268;AN=56;BaseQRankSum=2.877;DP=1167;FS=3.926;HRun=0;HaplotypeScore=268.5788;InbreedingCoeff=0.6502;MQ=47.07;MQ0=73;MQRankSum=-0.666;QD=11.93;ReadPosRankSum=-0.335;VQSLOD=3.2192;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:45,1:46:18.96:19,0,661	1/1:3,0:21:1.24:4,1,0	0/0:15,0:9:12.03:0,12,150	0/0:17,0:8:13.28:0,13,182	1/1:18,12:34:33.11:437,33,0	0/0:39,0:39:9.03:0,9,140	0/0:46,0:34:38.87:0,39,598	0/0:68,0:37:60.64:0,61,685	0/0:54,0:53:99:0,133,2216	1/1:38,23:64:26.17:1378,26,0	1/1:14,8:27:24.08:320,24,0	0/0:52,0:52:73.11:0,73,1843	0/0:57,0:55:99:0,129,2133	0/0:47,0:46:99:0,100,1975	0/0:65,0:61:18.03:0,18,239	0/0:77,0:72:24.06:0,24,327	0/1:21,4:26:48.42:179,0,48	0/0:41,1:40:53.08:0,53,865	0/0:34,0:23:46.49:0,46,488	0/0:24,0:21:5.65:0,6,41	0/0:81,7:72:21.73:0,22,397	0/0:37,0:37:72.44:0,72,1548	0/0:29,0:26:53.65:0,54,929	0/0:35,1:33:16.37:0,16,874	0/0:31,0:31:49.45:0,49,760	1/1:27,13:37:73.73:868,74,0	1/1:8,9:22:30.05:375,30,0	0/1:4,2:6:17:107,0,17
chr10	17760366	.	ATG	A	1003.68	PASS	AB=0.909;AC=10;AF=0.185;AN=54;BaseQRankSum=9.723;DP=1208;FS=3.899;HRun=0;HaplotypeScore=277.2561;InbreedingCoeff=0.1298;MQ=45.56;MQ0=74;MQRankSum=-9.711;QD=2.53;ReadPosRankSum=0.367;VQSLOD=1.6996;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:49,2:51:45.42:0,45,495	1/1:21,1:21:3.01:41,3,0	./.	0/0:12,0:5:8.94:0,9,109	0/0:30,4:31:21.50:0,22,74	0/0:40,0:40:18.04:0,18,273	0/0:50,0:33:36.99:0,37,566	0/1:77,1:42:28.81:56,0,29	0/0:64,0:63:99:0,155,1817	0/1:64,8:61:99:372,0,290	0/0:22,4:23:14.87:0,15,57	0/0:58,0:58:99:0,120,1423	0/0:58,1:57:99:0,110,1704	0/0:53,0:52:99:0,117,1331	0/0:68,0:67:39.13:0,39,637	0/0:76,0:73:39.13:0,39,652	0/0:19,3:21:6.34:0,6,114	0/0:44,0:43:67.15:0,67,885	0/1:29,1:21:70.38:143,0,70	1/1:14,12:23:5.77:57,6,0	0/1:84,9:70:92.72:93,0,153	0/0:38,0:38:87.21:0,87,981	0/0:35,0:32:75.22:0,75,938	0/0:41,0:38:69.15:0,69,812	0/0:28,0:28:34.38:0,34,505	0/1:41,7:37:99:308,0,134	0/1:21,3:24:53.67:76,0,54	0/0:6,0:5:4.74:0,5,16
chr10	17760372	.	G	GTA	400.18	PASS	AB=0.982;AC=7;AF=0.130;AN=54;BaseQRankSum=6.272;DP=1215;FS=0.636;HRun=0;HaplotypeScore=279.3389;InbreedingCoeff=0.1239;MQ=44.80;MQ0=84;MQRankSum=-6.019;QD=1.39;ReadPosRankSum=-3.981;VQSLOD=1.7433;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:43.29:0,43,641	0/0:24,0:22:1.82:0,2,13	./.	0/0:6,0:3:9.03:0,9,112	0/1:33,0:29:10.43:10,0,133	0/0:39,0:39:21.03:0,21,276	0/0:54,0:34:36.39:0,36,491	0/1:79,1:40:99:155,0,484	0/0:67,0:66:99:0,162,2313	0/0:71,0:57:78.91:0,79,939	0/1:26,0:23:10.52:11,0,81	0/0:55,0:55:99:0,126,1800	0/0:63,0:61:99:0,158,2273	0/0:54,0:53:99:0,126,1811	0/0:68,0:67:51.07:0,51,687	0/0:82,0:78:53.80:0,54,711	0/0:26,0:25:13.34:0,13,203	0/0:37,1:37:67.09:0,67,910	0/1:27,1:19:87.78:88,0,240	1/1:26,0:23:8.63:89,9,0	0/1:90,3:69:99:175,0,204	0/0:38,0:38:87.28:0,87,1263	0/0:37,0:34:81.24:0,81,1152	0/0:45,0:42:80.57:0,81,1107	0/0:23,0:23:37.37:0,37,493	0/0:50,0:36:54.16:0,54,543	0/0:26,0:25:12.43:0,12,238	0/0:6,0:5:11.90:0,12,109
chr10	17760376	.	ATG	A	771.43	PASS	AB=0.934;AC=6;AF=0.115;AN=52;BaseQRankSum=3.359;DP=1224;FS=0.622;HRun=0;HaplotypeScore=278.4875;InbreedingCoeff=0.4811;MQ=44.61;MQ0=88;MQRankSum=-9.049;QD=3.59;ReadPosRankSum=-2.917;VQSLOD=1.8112;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:54:30.30:0,30,610	1/1:26,0:24:1.55:5,2,0	./.	./.	0/0:35,0:31:12.03:0,12,135	0/0:39,0:39:30.10:0,30,499	0/0:56,0:34:30.10:0,30,487	1/1:51,23:33:23.44:689,23,0	0/0:68,0:67:99:0,155,2528	0/0:73,0:58:99:0,104,1084	0/0:26,0:23:18.03:0,18,185	0/0:55,0:55:99:0,120,2035	0/0:62,0:60:99:0,159,2524	0/0:57,0:56:99:0,123,2038	0/0:73,0:71:63.18:0,63,1007	0/0:82,0:78:60.20:0,60,996	0/0:27,0:26:29.53:0,30,299	0/0:37,0:36:48.85:0,49,841	0/1:21,3:16:99:164,0,147	0/0:26,0:21:0.47:0,0,1	0/1:88,2:66:29.80:30,0,227	0/0:35,0:35:66.23:0,66,1130	0/0:37,0:34:78.25:0,78,1301	0/0:50,0:47:41.95:0,42,1254	0/0:25,0:25:28.45:0,28,404	0/0:54,0:40:56.28:0,56,571	0/0:26,0:25:32.52:0,33,336	0/0:6,0:5:6.02:0,6,68
chr10	17760388	.	GTA	G	66.85	PASS	AB=0.944;AC=10;AF=0.192;AN=52;BaseQRankSum=7.130;DP=1302;FS=7.417;HRun=0;HaplotypeScore=284.8506;InbreedingCoeff=0.0118;MQ=43.09;MQ0=116;MQRankSum=-2.420;QD=0.19;ReadPosRankSum=-5.337;VQSLOD=0.5004;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:55:52.52:0,53,818	0/1:22,3:23:2.65:38,0,3	./.	./.	0/1:33,6:34:34.67:35,0,54	0/0:41,0:41:42.14:0,42,757	0/0:61,0:39:48.01:0,48,922	0/0:88,0:28:22.54:0,23,330	0/0:72,1:69:99:0,167,3083	0/1:72,4:58:17.83:18,0,1483	0/1:27,3:24:42.61:55,0,43	0/0:72,0:69:99:0,156,2884	0/0:60,0:57:99:0,147,2743	0/0:55,0:54:99:0,120,2062	0/0:80,0:73:84.10:0,84,1549	0/0:87,0:83:81.28:0,81,1543	0/1:27,1:28:7.86:8,0,321	0/0:38,0:37:36.47:0,36,1124	0/1:19,0:14:10.02:10,0,193	1/1:32,0:24:1.44:10,1,0	0/1:85,3:63:17.78:18,0,266	0/0:44,0:43:84.24:0,84,1517	0/0:40,0:36:87.27:0,87,1593	0/0:52,0:48:93.04:0,93,1607	0/0:31,0:30:37.70:0,38,725	0/0:44,4:36:38.85:0,39,961	0/0:26,3:27:25.56:0,26,285	0/1:8,0:7:7.50:7,0,86
chr10	17760396	.	ATG	A	494.74	PASS	AB=0.912;AC=4;AF=0.077;AN=52;BaseQRankSum=2.631;DP=1320;FS=13.588;HRun=0;HaplotypeScore=285.8936;InbreedingCoeff=0.2792;MQ=43.17;MQ0=109;MQRankSum=-2.519;QD=3.34;ReadPosRankSum=-4.274;VQSLOD=0.7103;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:53:39.33:0,39,754	0/0:24,0:22:8.74:0,9,125	./.	./.	0/0:38,0:34:6.02:0,6,75	0/0:44,0:44:51.16:0,51,855	0/0:67,0:45:72.24:0,72,1233	0/0:76,3:25:38.87:0,39,596	0/0:77,0:73:99:0,167,2760	0/0:78,0:59:99:0,129,1933	0/0:29,0:24:6.01:0,6,62	0/0:71,0:68:99:0,144,2408	0/0:67,0:64:99:0,153,2595	0/0:47,0:46:86.92:0,87,1424	0/0:80,0:73:90.10:0,90,1554	0/0:86,0:82:93.32:0,93,1598	0/0:30,0:30:26.30:0,26,360	0/0:39,0:41:93.19:0,93,1413	0/1:14,2:13:68.94:69,0,240	1/1:22,9:22:6.02:78,6,0	0/1:94,7:77:99:452,0,188	0/0:45,0:44:78.16:0,78,1278	0/0:39,0:36:84.25:0,84,1382	0/0:51,0:48:84.27:0,84,1400	0/0:32,0:31:49.62:0,50,838	0/0:49,1:37:72.24:0,72,1116	0/0:31,0:29:30.04:0,30,388	0/0:8,0:7:3.01:0,3,43
chr10	17760436	.	A	ATG	5960.26	PASS	AB=0.696;AC=12;AF=0.214;AN=56;BaseQRankSum=12.965;DP=1467;FS=19.290;HRun=0;HaplotypeScore=260.5261;InbreedingCoeff=0.5324;MQ=46.48;MQ0=92;MQRankSum=-0.177;QD=17.85;ReadPosRankSum=-2.289;VQSLOD=3.2040;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:51.91:0,52,638	1/1:6,10:16:15.05:260,15,0	0/0:7,0:3:9.03:0,9,114	0/0:5,0:2:6.02:0,6,77	1/1:10,35:43:57.13:979,57,0	0/0:41,0:40:81.16:0,81,1077	0/0:55,1:45:32.21:0,32,1026	0/0:128,0:72:99:0,166,2136	0/0:61,0:57:99:0,138,1809	0/1:60,31:77:99:1633,0,524	1/1:10,26:32:42.14:728,42,0	0/0:70,0:67:99:0,153,1993	0/0:67,0:65:99:0,169,2202	0/0:50,0:50:99:0,111,1476	0/0:90,0:83:99:0,168,2215	0/0:76,1:76:99:0,147,1940	0/1:20,13:33:52.71:445,0,53	0/0:52,0:52:29.11:0,29,1141	0/0:26,0:19:8.42:0,8,471	0/0:40,0:35:62.99:0,63,837	0/0:112,5:97:99:0,133,1640	0/0:56,0:55:99:0,111,1474	0/0:39,0:41:87.29:0,87,1157	0/0:61,0:58:99:0,120,1562	0/0:36,0:35:19.18:0,19,884	0/1:36,25:47:99:987,0,303	0/1:15,26:39:66.83:669,0,67	1/1:2,7:9:15.05:260,15,0
chr10	17761900	.	G	GT	3916.82	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-14.219;DP=636;FS=5.369;HRun=7;HaplotypeScore=62.0510;InbreedingCoeff=0.9937;MQ=78.98;MQ0=0;MQRankSum=-1.756;QD=29.90;ReadPosRankSum=0.160;VQSLOD=4.0897;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,123,1187	0/0:15,0:15:42.07:0,42,405	0/0:19,0:19:33.52:0,34,312	0/0:16,0:16:19.21:0,19,236	0/0:24,0:24:72.12:0,72,695	1/1:1,24:25:69.21:834,69,0	1/1:4,29:33:78.24:942,78,0	0/0:24,0:24:63.10:0,63,608	0/0:16,0:16:45.04:0,45,427	0/0:28,0:28:78.11:0,78,746	0/0:13,0:13:36.06:0,36,347	0/0:23,0:23:63.10:0,63,608	0/0:19,0:19:51.07:0,51,492	0/0:32,0:32:93.14:0,93,892	1/1:1,15:16:39.12:471,39,0	1/1:3,14:17:13.25:442,13,0	0/0:27,0:27:78.13:0,78,753	1/1:1,20:21:57.17:689,57,0	0/0:30,0:30:72.10:0,72,695	0/0:15,0:15:39.05:0,39,370	0/0:46,0:46:99:0,117,1130	0/0:13,0:13:36.06:0,36,348	0/0:16,0:16:33.03:0,33,312	0/0:32,0:32:93.15:0,93,898	1/1:4,15:19:45.14:539,45,0	0/0:25,0:25:69.11:0,69,666	0/0:17,0:17:45.07:0,45,434	0/0:12,0:12:33.05:0,33,319
chr10	17762129	.	AGT	A	3442.79	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=6.127;DP=680;FS=0.419;HRun=0;HaplotypeScore=87.3743;InbreedingCoeff=0.9983;MQ=83.69;MQ0=0;MQRankSum=-2.958;QD=34.09;ReadPosRankSum=-2.365;VQSLOD=4.7968;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,135,2219	0/0:10,0:10:27.09:0,27,467	0/0:31,1:31:87.21:0,87,1393	0/0:17,0:16:46.04:0,46,783	0/0:17,0:17:51.17:0,51,885	0/0:18,0:18:51.14:0,51,830	0/0:34,0:34:99:0,102,1670	1/1:2,12:14:36.11:472,36,0	0/0:22,0:22:63.22:0,63,1093	0/0:28,0:28:78.25:0,78,1313	0/0:10,0:10:30.10:0,30,522	0/0:34,0:34:96.33:0,96,1675	0/0:29,0:29:87.27:0,87,1458	0/0:27,0:27:75.23:0,75,1275	0/0:25,0:25:72.23:0,72,1233	0/0:15,0:15:42.13:0,42,708	0/0:43,0:43:99:0,126,2133	0/0:22,0:22:60.21:0,60,1051	1/1:3,20:23:62.87:785,63,0	1/1:2,12:14:33.11:442,33,0	1/1:0,50:50:99:1744,129,0	0/0:20,0:20:54.18:0,54,944	0/0:16,0:16:45.13:0,45,750	0/0:35,0:35:93.32:0,93,1626	0/0:23,0:23:66.23:0,66,1140	0/0:23,0:23:57.18:0,57,947	0/0:25,0:24:66.23:0,66,1132	0/0:7,0:7:21.07:0,21,367
chr10	17762500	.	C	CTG	18854.47	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=-15.877;DP=662;FS=0.296;HRun=0;HaplotypeScore=74.8093;InbreedingCoeff=0.9984;MQ=80.97;MQ0=1;MQRankSum=-2.871;QD=49.10;ReadPosRankSum=5.083;VQSLOD=5.9184;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,47:51:99:2584,138,0	1/1:0,10:10:27.09:489,27,0	0/0:23,0:23:57.18:0,57,776	0/0:11,0:11:18.03:0,18,234	1/1:1,18:19:48.16:899,48,0	0/0:27,0:27:78.25:0,78,1128	0/0:31,0:31:87.29:0,87,1278	0/0:24,0:24:63.17:0,63,843	1/1:0,27:27:69.24:1285,69,0	1/1:0,34:34:99:1910,102,0	1/1:0,19:21:57.18:1028,57,0	1/1:2,19:21:54.19:1006,54,0	1/1:1,22:23:63.22:1179,63,0	1/1:3,21:25:57.20:1066,57,0	0/0:21,0:21:60.20:0,60,883	0/0:27,0:27:75.25:0,75,1104	1/1:2,39:41:99:2022,108,0	0/0:31,0:31:93.26:0,93,1305	0/0:14,0:14:39.13:0,39,574	0/0:25,0:25:69.19:0,69,967	0/0:24,0:24:72.18:0,72,980	1/1:0,16:16:42.14:786,42,0	1/1:0,17:17:42.14:786,42,0	1/1:3,21:25:54.19:1011,54,0	0/0:20,0:20:60.18:0,60,847	1/1:0,26:27:75.24:1372,75,0	1/1:3,15:17:54.18:981,54,0	1/1:0,8:8:24.08:449,24,0
chr10	17764927	.	A	AG	6707.05	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-14.548;DP=656;FS=0.000;HRun=7;HaplotypeScore=67.0422;InbreedingCoeff=0.9833;MQ=79.31;MQ0=0;MQRankSum=-0.625;QD=26.94;ReadPosRankSum=-0.563;VQSLOD=5.1403;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,122,1158	0/0:6,0:6:15.02:0,15,145	0/0:22,0:22:44.01:0,44,386	0/0:17,0:17:10.11:0,10,222	0/0:16,0:16:39.04:0,39,371	1/1:3,22:25:54.17:652,54,0	1/1:4,32:36:72.22:870,72,0	1/1:4,22:26:63.06:688,63,0	0/0:30,0:30:75.08:0,75,711	0/0:31,0:31:84.12:0,84,805	0/0:14,0:14:29.71:0,30,271	0/0:32,0:32:90.12:0,90,862	0/0:31,0:31:78.11:0,78,750	0/0:29,0:29:75.05:0,75,723	1/1:0,26:26:69.21:833,69,0	1/1:1,21:22:57.17:688,57,0	0/0:31,0:31:87.12:0,87,834	1/1:4,20:24:57.17:688,57,0	1/1:4,16:20:48.10:553,48,0	1/1:0,7:7:21.06:250,21,0	1/1:5,38:42:81.25:977,81,0	0/0:13,0:13:10.31:0,10,194	0/0:16,0:16:40.31:0,40,380	0/0:26,0:26:66.05:0,66,628	1/1:0,19:19:42.13:507,42,0	0/0:24,0:24:59.99:0,60,560	0/0:16,0:16:39.02:0,39,369	0/0:11,0:11:27.04:0,27,261
chr10	17767843	.	C	CTGTAGGGAAAGTGGCGT	42274.94	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-5.643;DP=650;FS=0.310;HRun=0;HaplotypeScore=280.2504;InbreedingCoeff=0.9993;MQ=69.95;MQ0=0;MQRankSum=-17.867;QD=149.91;ReadPosRankSum=-1.402;VQSLOD=4.2106;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,111,4914	1/1:7,3:10:27.09:1806,27,0	0/0:11,0:11:33.11:0,33,1146	0/0:16,0:16:42.14:0,42,1540	1/1:18,10:29:66.19:4372,66,0	0/0:21,0:21:57.20:0,57,2498	0/0:23,0:23:66.23:0,66,2809	1/1:38,0:37:99:6465,102,0	0/0:23,0:23:66.20:0,66,2780	1/1:15,11:27:75.21:4705,75,0	1/1:12,3:18:33.07:2201,33,0	0/0:19,0:19:51.16:0,51,2246	0/0:16,0:16:42:0,42,1906	0/0:31,0:31:84.23:0,84,3477	0/0:30,0:30:90.31:0,90,3892	0/0:27,0:27:75.26:0,75,3261	1/1:6,6:17:27.09:2122,27,0	0/0:20,0:20:60.16:0,60,2695	1/1:8,4:16:42.02:1871,42,0	1/1:17,11:31:78.27:5456,78,0	1/1:20,2:27:36.12:2369,36,0	0/0:20,0:20:57.20:0,57,2505	0/0:22,0:22:60.21:0,60,2265	0/0:30,0:30:87.25:0,87,3765	0/0:21,0:21:60.19:0,60,2494	1/1:14,7:23:69.21:4279,69,0	1/1:16,11:30:72.25:4899,72,0	1/1:3,5:9:24.08:1731,24,0
chr10	17768400	.	A	ACCAGATGC	44277.07	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-7.052;DP=705;FS=5.760;HRun=0;HaplotypeScore=181.2153;InbreedingCoeff=0.9607;MQ=73.37;MQ0=0;MQRankSum=-12.148;QD=69.84;ReadPosRankSum=2.334;VQSLOD=4.3668;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:20,29:49:72.25:3057,72,0	1/1:3,13:16:36.12:1487,36,0	0/0:27,0:27:63.18:0,63,1514	0/0:17,0:17:42.01:0,42,973	1/1:9,15:24:24.08:1028,24,0	1/1:10,18:28:54.19:2208,54,0	1/1:15,10:29:51.13:1987,51,0	1/1:23,12:35:57.20:2219,57,0	0/0:27,0:27:75.26:0,75,1987	1/1:7,22:29:75.26:3154,75,0	1/1:8,16:24:30.10:1283,30,0	1/1:7,15:22:48.16:2037,48,0	1/1:7,24:32:60.21:2532,60,0	1/1:4,16:21:39.13:1615,39,0	1/1:7,14:21:42.14:1790,42,0	1/1:4,15:19:51.18:2146,51,0	1/1:17,12:29:27.09:1157,27,0	1/1:4,12:16:27.09:1158,27,0	1/1:13,11:25:60.19:2048,60,0	1/1:7,26:33:63.22:2602,63,0	1/1:21,14:40:33.11:1209,33,0	1/1:6,12:21:27.09:1154,27,0	1/1:10,16:27:30.10:1227,30,0	1/1:9,10:19:24.08:1023,24,0	1/1:10,11:22:33.07:1273,33,0	1/1:8,21:30:72.25:2570,72,0	1/1:2,17:20:48.16:2055,48,0	1/1:1,2:3:6.02:257,6,0
chr10	17769416	.	CT	C	3609.16	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=3.677;DP=620;FS=3.722;HRun=10;HaplotypeScore=71.2663;InbreedingCoeff=0.9937;MQ=72.29;MQ0=4;MQRankSum=-0.664;QD=20.28;ReadPosRankSum=2.674;VQSLOD=4.7897;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,40:44:99:881,102,0	0/0:13,0:13:33.05:0,33,351	0/0:25,0:18:14:0,14,241	0/0:17,0:13:17.99:0,18,164	0/0:23,0:23:66.18:0,66,730	0/0:2,1:22:25.70:0,26,235	0/0:1,0:13:36.77:0,37,181	0/0:26,0:27:63:0,63,676	0/0:3,0:15:26.36:0,26,151	0/0:24,0:24:63.17:0,63,697	0/0:21,0:21:60.16:0,60,663	1/1:1,23:24:56.97:491,57,0	1/1:3,17:20:41.98:364,42,0	1/1:5,15:20:44.98:391,45,0	0/0:6,0:24:40.13:0,40,232	0/0:4,0:22:39.80:0,40,199	0/0:32,0:31:81.16:0,81,874	0/0:6,0:16:28.74:0,29,180	0/0:19,1:20:28.09:0,28,538	0/0:23,1:23:66.13:0,66,709	0/0:21,0:21:56.94:0,57,590	1/1:2,17:19:50.98:440,51,0	1/1:3,15:18:38.99:339,39,0	1/1:3,30:33:80.98:703,81,0	0/0:3,0:13:31.58:0,32,194	0/0:28,0:27:54.13:0,54,582	0/0:22,1:23:40.10:0,40,659	0/0:17,0:17:25.67:0,26,343
chr10	17770498	.	GGTGTGT	G	8408.96	PASS	AB=0.839;AC=45;AF=0.804;AN=56;BaseQRankSum=-1.840;DP=982;FS=27.256;HRun=0;HaplotypeScore=229.5743;InbreedingCoeff=0.2747;MQ=49.91;MQ0=54;MQRankSum=2.318;QD=10.32;ReadPosRankSum=4.274;VQSLOD=2.4884;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:12,19:32:15.92:251,16,0	1/1:1,9:10:9.03:190,9,0	0/0:52,0:9:3.01:0,3,75	0/0:68,0:22:12.03:0,12,192	1/1:7,15:22:5.71:60,6,0	1/1:23,0:24:5.03:177,5,0	1/1:40,0:40:18.70:436,19,0	0/1:37,0:34:66.80:382,0,67	1/1:35,0:35:40.05:458,40,0	1/1:23,23:46:21.88:1050,22,0	1/1:8,15:23:3.01:43,3,0	1/1:10,18:30:22.06:492,22,0	1/1:5,21:25:22.88:503,23,0	1/1:8,24:30:20.76:397,21,0	1/1:47,0:46:5.43:542,5,0	1/1:28,0:28:37.93:322,38,0	0/1:14,21:35:0.17:186,0,0	0/1:29,0:29:7.02:247,0,7	0/1:38,0:27:1.69:269,0,2	1/1:26,0:25:14.19:143,14,0	1/1:96,0:91:71.04:664,71,0	1/1:7,31:39:8.06:85,8,0	0/1:6,18:23:15.03:35,0,15	0/0:16,30:45:2.94:0,3,18	1/1:23,0:23:18.03:180,18,0	1/1:17,21:37:53.93:914,54,0	1/1:2,13:16:15.94:317,16,0	1/1:6,8:12:3.01:64,3,0
chr10	17770519	.	GTGTGTA	G	5984.79	PASS	AB=0.996;AC=37;AF=0.661;AN=56;BaseQRankSum=9.162;DP=982;FS=4.916;HRun=0;HaplotypeScore=226.9469;InbreedingCoeff=-0.2532;MQ=47.92;MQ0=55;MQRankSum=-0.595;QD=6.86;ReadPosRankSum=9.479;VQSLOD=1.6832;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:34,0:32:99:120,0,127	1/1:9,0:9:9.03:138,9,0	0/0:41,0:5:3.71:0,4,128	0/0:67,0:10:11.15:0,11,245	1/1:22,0:21:6.84:45,7,0	0/1:23,0:23:11.38:90,0,11	1/1:46,2:48:21.52:369,22,0	0/1:41,0:32:42.64:305,0,43	1/1:40,1:41:52.10:407,52,0	0/1:39,0:35:45.64:651,0,46	0/1:20,0:20:11.65:12,0,75	0/1:30,1:31:82.82:328,0,83	0/1:28,0:26:75.48:338,0,75	0/1:33,0:32:99:245,0,106	1/1:46,2:46:5.92:393,6,0	1/1:29,0:29:25.96:211,26,0	0/1:33,0:33:82.68:134,0,83	1/1:33,1:34:35.01:250,35,0	1/1:37,2:22:8.20:322,8,0	1/1:21,0:20:6.22:198,6,0	1/1:101,0:94:34.18:431,34,0	0/1:38,0:37:33.22:64,0,33	0/1:23,0:21:12.06:12,0,24	0/1:48,0:46:11.69:12,0,132	1/1:25,0:25:14.96:120,15,0	0/1:30,1:27:65.44:544,0,65	0/1:19,0:18:69.67:207,0,70	0/1:14,0:13:41.39:41,0,59
chr10	17770521	.	GTGTA	G	7630.06	PASS	AB=1.000;AC=36;AF=0.643;AN=56;BaseQRankSum=9.108;DP=990;FS=0.438;HRun=0;HaplotypeScore=210.0885;InbreedingCoeff=0.0372;MQ=48.19;MQ0=51;MQRankSum=-3.059;QD=9.36;ReadPosRankSum=9.603;VQSLOD=3.0604;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:36,0:34:27.19:27,0,179	1/1:9,0:9:8.30:38,8,0	0/0:43,0:6:7.12:0,7,131	0/0:61,0:8:11.15:0,11,213	0/1:22,0:21:9.46:22,0,9	1/1:3,19:22:23.54:373,24,0	1/1:14,34:48:38.04:509,38,0	1/1:40,3:35:27.91:619,28,0	1/1:6,35:41:53.90:884,54,0	0/1:38,0:34:73.43:173,0,73	0/0:22,0:22:16.92:0,17,118	0/1:33,0:33:58.64:59,0,145	0/1:28,0:26:71.33:71,0,77	0/1:36,0:35:42.42:42,0,151	1/1:7,40:44:48.19:1060,48,0	1/1:3,25:28:30.09:514,30,0	0/1:34,0:34:35.78:36,0,83	1/1:7,27:34:41.94:653,42,0	1/1:32,4:23:18.77:475,19,0	1/1:15,8:22:38.87:425,39,0	1/1:19,82:94:36.45:1096,36,0	0/1:39,0:38:40.24:40,0,51	0/1:24,0:22:0.99:1,0,19	0/0:48,0:46:0.04:0,0,132	1/1:3,22:25:15.05:283,15,0	0/1:32,0:28:98.59:156,0,99	0/1:19,0:18:62.20:64,0,62	0/1:15,0:13:13.07:13,0,59
chr10	17770525	.	A	ATG	2876.08	PASS	AB=0.993;AC=23;AF=0.411;AN=56;BaseQRankSum=-0.001;DP=989;FS=5.151;HRun=0;HaplotypeScore=219.1140;InbreedingCoeff=0.7632;MQ=48.08;MQ0=43;MQRankSum=-1.068;QD=5.64;ReadPosRankSum=4.117;VQSLOD=2.9314;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:34:48.14:0,48,568	0/0:9,0:8:8.61:0,9,78	0/1:42,0:6:4.56:5,0,117	0/0:57,0:7:17.71:0,18,174	0/0:22,0:21:6.02:0,6,71	1/1:22,1:23:19.48:106,19,0	0/1:44,1:45:9.80:147,0,10	1/1:45,0:35:50.12:762,50,0	1/1:41,0:40:41.53:190,42,0	0/0:40,0:37:49.52:0,50,740	0/0:22,0:22:18.06:0,18,222	0/0:34,0:34:47.86:0,48,577	0/0:29,0:27:41.65:0,42,437	0/0:38,0:37:43.56:0,44,493	1/1:45,0:43:59.83:363,60,0	1/1:26,0:26:24.41:136,24,0	0/0:36,0:35:8.65:0,9,229	1/1:32,0:32:39.15:298,39,0	1/1:36,1:23:23.94:314,24,0	1/1:24,0:23:31.52:394,32,0	1/1:97,2:92:10.65:273,11,0	0/0:39,0:38:10.56:0,11,117	0/1:25,0:23:7.36:7,0,63	0/0:48,0:47:16.86:0,17,233	1/1:26,0:26:14.75:92,15,0	0/0:33,0:29:61.21:0,61,649	0/0:19,0:18:30.01:0,30,341	0/0:14,0:13:17.26:0,17,185
chr10	17770773	.	ATG	A	3467.68	PASS	AB=0.957;AC=9;AF=0.161;AN=56;BaseQRankSum=5.059;DP=1025;FS=4.338;HRun=0;HaplotypeScore=179.2953;InbreedingCoeff=0.8696;MQ=48.99;MQ0=40;MQRankSum=1.739;QD=15.69;ReadPosRankSum=-1.896;VQSLOD=3.3369;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:87.25:0,87,1405	0/0:12,0:12:27.09:0,27,429	0/0:67,0:4:11.76:0,12,110	0/0:72,0:10:5.49:0,5,138	0/0:34,2:34:26.03:0,26,939	0/0:27,0:26:57.19:0,57,899	0/0:35,1:36:29.03:0,29,943	1/1:35,13:42:21.78:791,22,0	0/0:25,0:24:48.14:0,48,739	0/0:47,1:46:65.64:0,66,1554	0/0:26,1:27:22.96:0,23,893	0/0:36,0:36:87.30:0,87,1417	0/1:21,1:21:1.61:2,0,763	0/0:25,1:26:22.60:0,23,856	0/0:26,0:25:56.40:0,56,880	0/0:28,1:29:38.05:0,38,1089	0/0:34,0:33:61.41:0,61,1041	0/0:26,0:26:33.11:0,33,526	1/1:16,15:21:28.26:529,28,0	1/1:6,32:38:78.22:967,78,0	1/1:51,30:72:98.80:1180,99,0	0/0:44,1:44:84.29:0,84,1361	0/0:23,1:24:10.54:0,11,622	0/0:50,0:49:75.21:0,75,1215	0/0:30,0:30:63.21:0,63,1023	0/0:41,0:37:88.71:0,89,1346	0/0:24,1:23:28.62:0,29,945	0/0:16,0:15:41.63:0,42,624
chr10	17770857	.	A	AAAAAC	1875.46	PASS	AB=0.752;AC=11;AF=0.196;AN=56;BaseQRankSum=2.999;DP=641;FS=2.254;HRun=0;HaplotypeScore=146.0025;InbreedingCoeff=0.3388;MQ=59.59;MQ0=17;MQRankSum=-2.333;QD=9.72;ReadPosRankSum=7.432;VQSLOD=2.2656;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:66.61:0,67,546	0/0:12,0:11:27.33:0,27,215	0/0:42,0:6:5.03:0,5,74	0/0:31,0:14:21.15:0,21,172	0/0:22,0:21:49.55:0,50,425	0/1:6,18:27:0.41:255,0,0	0/1:6,11:20:15.06:148,0,15	0/0:30,0:30:22.01:0,22,269	0/1:25,0:25:17.21:316,0,17	0/0:24,0:23:56.99:0,57,478	0/0:17,0:17:31.31:0,31,230	0/0:27,0:27:66.76:0,67,548	0/0:9,0:9:23.96:0,24,202	0/0:19,0:19:52.44:0,52,407	0/1:4,7:15:26.23:65,0,26	1/1:18,0:18:19.93:465,20,0	0/0:10,0:8:20.07:0,20,150	1/1:23,0:23:19.74:665,20,0	0/1:20,0:17:28.67:29,0,149	0/0:34,0:33:8.98:0,9,227	0/1:23,0:23:21.37:21,0,207	0/0:26,0:26:64.02:0,64,504	0/0:16,0:15:29.95:0,30,259	0/0:20,0:20:36.90:0,37,301	0/1:3,15:22:0.13:71,0,0	0/0:29,0:28:70.56:0,71,539	0/0:28,0:28:78.31:0,78,656	0/0:23,0:20:35.90:0,36,307
chr10	17770963	.	AT	A	5537.25	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=8.947;DP=658;FS=10.179;HRun=1;HaplotypeScore=71.8519;InbreedingCoeff=0.9991;MQ=86.55;MQ0=0;MQRankSum=-3.110;QD=38.99;ReadPosRankSum=2.537;VQSLOD=5.1129;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,117,1847	0/0:8,0:8:21.07:0,21,336	0/0:20,0:20:60.05:0,60,864	0/0:26,0:26:75.26:0,75,1185	0/0:24,0:24:66.22:0,66,1047	1/1:0,20:20:57.19:797,57,0	1/1:0,25:25:66.22:923,66,0	0/0:26,0:26:78.27:0,78,1247	0/0:28,0:28:78.25:0,78,1220	0/0:17,0:17:51.17:0,51,816	0/0:14,0:14:36.12:0,36,575	0/0:27,0:27:78.25:0,78,1224	0/0:22,0:22:66.23:0,66,1055	0/0:24,0:24:72.23:0,72,1128	1/1:0,35:35:99:1384,99,0	1/1:0,22:22:63.21:881,63,0	0/0:27,0:26:78.22:0,78,1219	1/1:0,22:22:60.20:839,60,0	0/0:21,0:21:63.20:0,63,985	0/0:29,0:29:81.28:0,81,1294	0/0:29,0:29:84.29:0,84,1343	0/0:19,0:19:54.14:0,54,835	0/0:21,0:21:60.19:0,60,936	0/0:30,0:30:84.29:0,84,1343	1/1:0,18:18:51.17:713,51,0	0/0:24,0:23:69.23:0,69,1091	0/0:28,0:28:84.26:0,84,1293	0/0:11,0:11:33.11:0,33,527
chr10	17772334	.	A	AGT	2605.58	PASS	AB=0.886;AC=18;AF=0.321;AN=56;BaseQRankSum=13.451;DP=1004;FS=7.753;HRun=0;HaplotypeScore=286.1983;InbreedingCoeff=-0.1339;MQ=44.59;MQ0=24;MQRankSum=0.048;QD=4.70;ReadPosRankSum=0.758;VQSLOD=1.7291;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:5.01:0,5,43	0/0:22,0:22:54.02:0,54,667	0/0:61,0:20:45.86:0,46,531	0/0:61,0:23:46.94:0,47,586	0/0:25,0:24:69.21:0,69,881	0/1:14,3:18:81.08:101,0,81	0/1:41,2:41:99:152,0,123	0/1:24,4:25:35.23:329,0,35	1/1:14,19:33:7.78:505,8,0	0/0:54,0:53:99:0,147,1897	0/0:20,0:20:45.14:0,45,574	0/1:41,1:41:28.03:38,0,28	1/1:29,0:29:19.08:179,19,0	0/1:48,0:47:9.62:33,0,10	0/1:28,10:38:4.60:262,0,5	0/1:31,8:39:91.40:357,0,91	0/0:47,0:47:99:0,117,1495	0/1:17,14:31:99:104,0,199	0/1:16,2:14:7.68:185,0,8	0/1:20,6:26:39.29:249,0,39	0/1:59,3:56:23.88:164,0,24	0/1:38,1:38:12.58:13,0,35	0/1:27,0:27:15.87:16,0,133	0/0:53,0:53:1.94:0,2,107	0/1:26,7:33:87.23:87,0,169	0/0:48,0:48:99:0,129,1648	0/0:20,0:20:57.18:0,57,738	0/0:13,0:13:36.52:0,37,434
chr10	17772344	.	A	AGT	6027.52	PASS	AB=0.951;AC=25;AF=0.446;AN=56;BaseQRankSum=13.788;DP=1009;FS=9.147;HRun=0;HaplotypeScore=296.8706;InbreedingCoeff=0.2095;MQ=45.26;MQ0=22;MQRankSum=-0.171;QD=9.52;ReadPosRankSum=4.373;VQSLOD=3.1275;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:12,12:24:15.09:226,15,0	0/0:21,0:21:57.07:0,57,837	0/0:57,0:19:44.30:0,44,562	0/0:55,0:21:49.94:0,50,622	0/0:25,0:24:69.22:0,69,993	0/1:15,1:16:12.01:12,0,59	0/1:38,3:39:80.56:81,0,123	0/1:22,1:20:14.01:240,0,14	0/1:39,0:39:68.31:68,0,222	0/0:55,0:53:99:0,157,2271	0/0:22,0:22:60.14:0,60,823	1/1:13,29:42:35.70:614,36,0	1/1:5,25:29:72.14:1130,72,0	1/1:9,37:46:60.12:964,60,0	0/1:40,3:43:40.04:40,0,137	0/1:32,2:35:99:155,0,117	0/0:52,0:52:99:0,129,1873	0/1:29,0:29:68.18:68,0,130	0/1:22,1:14:99:196,0,104	0/1:27,3:30:16.41:16,0,160	0/1:63,1:59:57.76:58,0,63	1/1:12,26:37:44.58:766,45,0	1/1:10,17:27:16.69:303,17,0	1/1:17,31:48:53.98:868,54,0	0/1:30,3:33:58.32:223,0,58	0/0:47,0:47:99:0,138,1979	0/0:23,0:23:66.22:0,66,965	0/0:16,0:16:48.16:0,48,701
chr10	17772345	.	GTA	G	567.14	PASS	AB=0.916;AC=13;AF=0.232;AN=56;BaseQRankSum=4.949;DP=1015;FS=6.112;HRun=0;HaplotypeScore=312.5176;InbreedingCoeff=-0.0628;MQ=45.28;MQ0=21;MQRankSum=-3.065;QD=1.40;ReadPosRankSum=-6.761;VQSLOD=0.4924;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:24:2.27:18,0,2	0/0:21,0:21:57.03:0,57,1060	0/0:57,0:19:45.46:0,45,702	0/0:55,0:20:41.38:0,41,696	0/0:25,0:24:69.20:0,69,1257	0/0:12,4:16:13.32:0,13,233	0/1:36,6:40:47.18:47,0,440	0/1:19,5:20:70.43:70,0,314	0/0:40,0:40:42.28:0,42,763	0/0:55,0:53:99:0,157,2930	0/0:22,0:22:63.20:0,63,1138	0/1:41,1:42:14.73:30,0,15	0/1:29,1:29:52.57:61,0,53	0/1:46,1:46:20.46:38,0,20	0/0:28,14:42:7.07:0,7,538	0/1:29,7:36:33.36:33,0,587	0/0:54,0:54:99:0,138,2505	0/1:27,2:29:15.02:15,0,340	0/1:21,3:15:61.25:61,0,351	0/0:20,10:30:28.67:0,29,566	0/0:61,5:60:25.46:0,25,370	0/0:36,2:37:11.01:0,11,29	1/1:24,3:27:2.50:46,3,0	0/1:46,2:48:4.35:126,0,4	0/1:26,7:33:99:174,0,190	0/0:47,0:47:99:0,141,2577	0/0:23,0:23:66.23:0,66,1264	0/0:16,0:16:48.16:0,48,925
chr10	17772347	.	A	ATG	5667.26	PASS	AB=0.983;AC=24;AF=0.429;AN=56;BaseQRankSum=12.442;DP=1040;FS=1.168;HRun=0;HaplotypeScore=308.8882;InbreedingCoeff=0.2685;MQ=45.10;MQ0=21;MQRankSum=0.993;QD=9.04;ReadPosRankSum=3.549;VQSLOD=4.1037;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:23,1:24:12.10:203,12,0	0/0:21,0:21:56.88:0,57,749	0/0:56,0:18:34.93:0,35,454	0/0:57,0:20:42.72:0,43,516	0/0:25,0:24:63.20:0,63,857	0/1:16,0:16:7.57:8,0,150	0/1:39,3:40:49.30:49,0,302	0/1:28,0:23:99:202,0,239	0/1:44,0:43:46.66:69,0,47	0/0:57,0:55:99:0,147,2010	0/0:23,0:23:63.19:0,63,839	1/1:43,0:43:31.62:608,32,0	1/1:31,0:30:69.17:1108,69,0	1/1:48,0:47:58.94:945,59,0	0/1:43,0:43:17.32:17,0,374	0/1:37,0:37:62.92:63,0,371	0/0:54,0:54:99:0,112,1656	0/1:29,0:29:53.82:54,0,232	0/1:25,0:17:99:178,0,240	0/0:30,0:30:9.05:0,9,373	0/1:58,8:60:27.65:28,0,212	1/1:41,0:40:44.50:765,45,0	1/1:28,0:27:17.70:304,18,0	1/1:49,0:49:53.94:868,54,0	0/1:33,0:33:99:199,0,136	0/0:50,0:50:99:0,129,1751	0/0:23,0:23:66.21:0,66,906	0/0:17,0:17:51.14:0,51,691
chr10	17772350	.	TGAGA	T	749.26	PASS	AB=0.884;AC=13;AF=0.232;AN=56;BaseQRankSum=6.769;DP=1038;FS=15.054;HRun=0;HaplotypeScore=348.6873;InbreedingCoeff=-0.2980;MQ=44.76;MQ0=20;MQRankSum=-5.106;QD=1.58;ReadPosRankSum=-6.576;VQSLOD=0.2167;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:24:7.24:0,7,31	0/0:20,1:21:41.86:0,42,1361	0/0:57,0:17:34.34:0,34,822	0/0:52,0:18:35.30:0,35,915	0/0:23,0:23:66.23:0,66,1748	0/1:13,5:18:36.07:36,0,318	0/1:37,6:41:36.64:37,0,804	0/1:25,5:25:99:125,0,746	0/0:43,0:42:34.77:0,35,700	0/0:57,0:55:99:0,160,4227	0/0:23,0:23:66.21:0,66,1694	0/1:43,1:44:52.51:53,0,120	0/1:30,1:30:36.56:37,0,223	0/0:47,1:47:14.52:0,15,144	0/1:31,14:45:2.91:3,0,852	0/1:29,7:36:46.60:47,0,901	0/0:54,0:53:99:0,135,3465	0/1:26,2:28:50.04:50,0,363	0/1:24,3:19:99:123,0,713	0/0:20,10:30:9.44:0,9,815	0/1:64,5:63:38.22:38,0,566	0/0:41,2:42:18.88:0,19,133	0/1:22,3:24:17.22:17,0,18	0/1:45,2:47:65.48:104,0,65	0/1:23,7:30:99:232,0,302	0/0:50,0:50:99:0,144,3704	0/0:23,0:23:69.22:0,69,1857	0/0:17,0:17:51.17:0,51,1317
chr10	17772354	.	A	AGT	728.74	PASS	AB=0.940;AC=15;AF=0.268;AN=56;BaseQRankSum=12.345;DP=1015;FS=11.258;HRun=0;HaplotypeScore=324.9860;InbreedingCoeff=0.3053;MQ=44.65;MQ0=19;MQRankSum=-1.335;QD=1.88;ReadPosRankSum=4.099;VQSLOD=0.2250;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:24:1.69:3,2,0	0/0:21,0:21:38.79:0,39,503	0/0:52,0:16:29.87:0,30,328	0/0:51,1:18:23.73:0,24,305	0/0:23,0:23:60.16:0,60,764	0/0:17,0:17:10.41:0,10,157	0/0:39,0:38:35:0,35,454	0/0:31,0:26:20.32:0,20,438	0/1:18,24:41:54.46:525,0,54	0/0:59,0:57:99:0,159,2010	0/0:22,0:22:57.16:0,57,725	0/1:42,0:42:39.74:40,0,42	1/1:30,0:29:20.44:177,20,0	1/1:50,0:49:4.60:67,5,0	0/0:43,0:43:20.07:0,20,440	0/0:34,0:34:22.77:0,23,486	0/0:52,0:51:99:0,117,1532	0/1:23,0:26:12.73:13,0,165	0/1:29,0:20:2.65:3,0,343	0/0:29,0:28:30.09:0,30,399	0/0:64,0:58:10.31:0,10,264	0/1:42,0:41:7.03:7,0,41	0/1:25,0:24:13.45:13,0,14	1/1:44,0:46:7.96:32,8,0	0/1:30,0:28:4.28:4,0,142	0/0:47,0:47:99:0,129,1618	0/0:23,0:22:63.21:0,63,837	0/0:18,0:18:45.13:0,45,583
chr10	17772420	.	AGT	A	159.99	PASS	AB=0.934;AC=6;AF=0.107;AN=56;BaseQRankSum=2.376;DP=987;FS=4.237;HRun=0;HaplotypeScore=443.5513;InbreedingCoeff=0.0915;MQ=46.67;MQ0=22;MQRankSum=1.477;QD=1.20;ReadPosRankSum=-4.571;VQSLOD=-0.2229;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:23,3:26:10.15:10,0,46	0/0:10,0:10:17.99:0,18,294	0/0:42,0:13:22.49:0,22,291	0/0:83,0:35:25.60:0,26,431	0/0:27,0:27:29.24:0,29,510	0/1:19,0:18:14.21:14,0,106	0/0:43,0:36:14.43:0,14,244	0/0:31,0:24:28.03:0,28,447	0/1:30,7:34:31.70:217,0,32	0/0:44,0:44:99:0,114,1851	0/0:20,0:20:32.80:0,33,560	0/0:55,0:52:52.47:0,52,823	0/0:31,0:30:48.12:0,48,689	0/0:57,0:53:49.91:0,50,764	0/0:43,0:41:12.10:0,12,322	0/0:44,0:41:60.36:0,60,910	0/0:40,0:39:87.09:0,87,1325	0/0:15,0:15:13.17:0,13,226	0/0:28,0:21:37.97:0,38,557	0/1:28,0:28:6.10:6,0,130	0/0:56,0:51:6.59:0,7,50	0/0:47,0:45:1.54:0,2,51	1/1:23,0:21:2.01:22,2,0	0/0:29,2:30:5.49:0,5,104	0/0:24,0:21:13.18:0,13,194	0/0:42,0:42:99:0,120,1926	0/0:25,0:25:66.18:0,66,1078	0/0:15,0:14:30.10:0,30,513
chr10	17772442	.	TC	T	11439.82	PASS	AC=54;AF=0.964;AN=56;BaseQRankSum=-1.861;DP=748;FS=2.367;HRun=1;HaplotypeScore=365.9319;InbreedingCoeff=0.3893;MQ=50.72;MQ0=10;MQRankSum=-1.574;QD=16.60;ReadPosRankSum=2.856;VQSLOD=3.7240;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,20:20:0.63:42,1,0	1/1:0,7:7:14.57:209,15,0	1/1:23,1:8:1.63:9,2,0	0/0:56,2:28:2.79:0,3,297	1/1:0,27:27:20.95:293,21,0	1/1:1,14:14:16.72:192,17,0	1/1:0,33:29:19.86:270,20,0	1/1:2,15:14:41.35:552,41,0	1/1:3,16:16:18.03:207,18,0	1/1:1,41:42:99:1715,123,0	1/1:3,17:20:24.01:314,24,0	1/1:1,43:41:57.60:778,58,0	1/1:1,29:29:49.40:664,49,0	1/1:2,53:50:55:691,55,0	1/1:2,27:27:12.11:145,12,0	1/1:0,38:35:60.67:838,61,0	1/1:3,29:31:58.42:780,58,0	1/1:2,7:9:20.99:250,21,0	1/1:0,8:8:18.06:251,18,0	1/1:0,27:26:9.02:124,9,0	1/1:7,20:28:4.83:37,5,0	1/1:0,35:33:2.15:42,2,0	1/1:0,13:12:0.04:0,0,0	1/1:1,22:22:5.40:82,5,0	1/1:0,22:20:11.98:168,12,0	1/1:1,34:35:99:1466,105,0	1/1:1,18:19:57.18:778,57,0	1/1:2,12:14:39.13:544,39,0
chr10	17772464	.	GT	G	12097.29	PASS	AB=0.655;AC=52;AF=0.929;AN=56;BaseQRankSum=-3.115;DP=680;FS=22.795;HRun=1;HaplotypeScore=380.6649;InbreedingCoeff=0.3795;MQ=46.10;MQ0=5;MQRankSum=-1.352;QD=18.06;ReadPosRankSum=3.377;VQSLOD=1.2652;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,21:24:11.78:207,12,0	1/1:0,6:6:15.05:210,15,0	0/0:8,2:4:5.99:0,6,69	0/1:23,7:16:27.80:28,0,101	0/1:0,22:22:0.12:0,0,0	1/1:0,17:16:21.07:290,21,0	1/1:0,33:32:16.92:251,17,0	1/1:1,24:17:51.17:712,51,0	1/1:17,1:18:18.64:82,19,0	1/1:0,38:38:99:1504,108,0	1/1:1,18:19:8.92:122,9,0	1/1:0,41:40:54.59:751,55,0	1/1:0,27:27:48.16:665,48,0	1/1:0,54:52:59.75:815,60,0	1/1:0,26:26:12.17:169,12,0	1/1:0,34:34:75.25:1042,75,0	1/1:0,23:22:39.60:545,40,0	1/1:1,7:8:21.07:293,21,0	1/1:0,12:10:27.09:377,27,0	1/1:0,32:31:33.54:438,34,0	1/1:5,21:25:9.03:126,9,0	1/1:1,26:27:2.63:42,3,0	1/1:0,11:11:3.37:42,3,0	1/1:3,18:21:5.05:82,5,0	1/1:1,26:26:33.05:461,33,0	1/1:0,42:42:99:1757,126,0	1/1:0,16:16:48.16:667,48,0	1/1:0,11:11:30.10:419,30,0
chr10	17772465	.	TA	T	6411.68	PASS	AB=0.984;AC=50;AF=0.893;AN=56;BaseQRankSum=-2.658;DP=693;FS=4.033;HRun=1;HaplotypeScore=412.1244;InbreedingCoeff=0.2899;MQ=44.80;MQ0=5;MQRankSum=0.666;QD=9.36;ReadPosRankSum=5.102;VQSLOD=2.8221;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:25:6.07:82,0,6	0/1:8,0:8:2.16:85,0,2	0/0:7,1:4:3:0,3,48	0/1:27,2:15:4.42:4,0,96	0/1:23,0:23:0.88:1,0,1	1/1:18,0:17:20.81:165,21,0	1/1:33,0:32:16.67:141,17,0	1/1:25,1:18:50.54:350,51,0	1/1:1,17:18:20.81:147,21,0	1/1:41,0:41:94.92:791,95,0	1/1:19,0:19:8.39:54,8,0	1/1:41,0:40:54.18:448,54,0	1/1:27,0:27:30.51:348,31,0	1/1:56,0:54:41.94:445,42,0	1/1:27,0:27:11.71:87,12,0	1/1:34,0:34:74.43:582,74,0	1/1:24,0:23:41.72:312,42,0	1/1:8,0:8:20.84:151,21,0	1/1:12,0:10:26.69:194,27,0	1/1:32,0:31:29.66:204,30,0	1/1:27,2:28:8.55:58,9,0	1/1:26,0:26:2.03:25,2,0	1/1:11,0:11:3.36:26,3,0	1/1:20,0:20:4.94:42,5,0	1/1:27,0:27:32.28:208,32,0	1/1:43,0:43:99:904,128,0	1/1:17,0:17:30.76:352,31,0	1/1:11,0:11:29.70:209,30,0
chr10	17772467	.	GTA	G	80.41	PASS	AB=0.960;AC=3;AF=0.054;AN=56;BaseQRankSum=3.989;DP=705;FS=1.368;HRun=0;HaplotypeScore=442.9208;InbreedingCoeff=0.3696;MQ=43.77;MQ0=4;MQRankSum=-1.444;QD=1.91;ReadPosRankSum=2.762;VQSLOD=0.7516;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:27:18.81:0,19,283	0/0:8,0:8:18.06:0,18,291	0/0:7,0:4:3:0,3,29	0/1:23,0:13:5.46:5,0,73	0/0:25,0:25:5.95:0,6,82	0/0:19,0:18:21.06:0,21,316	0/0:34,0:33:22.02:0,22,297	0/0:28,0:19:51.61:0,52,813	1/1:2,16:18:19.86:170,20,0	0/0:43,0:43:99:0,116,1634	0/0:18,0:18:6.21:0,6,77	0/0:42,0:41:51.28:0,51,736	0/0:28,0:28:52.70:0,53,754	0/0:56,0:54:65.53:0,66,911	0/0:27,0:27:14.31:0,14,181	0/0:34,0:34:61.72:0,62,920	0/0:24,0:23:36.80:0,37,502	0/0:8,0:8:21.07:0,21,352	0/0:12,0:10:27.09:0,27,442	0/0:33,0:32:24.43:0,24,370	0/0:32,0:31:9.20:0,9,119	0/0:26,0:26:2:0,2,47	0/0:11,0:11:2.46:0,2,45	0/0:20,0:20:4.94:0,5,83	0/0:27,0:27:33.47:0,33,510	0/0:45,0:45:99:0,133,1945	0/0:17,0:17:51.14:0,51,787	0/0:12,0:12:33.11:0,33,541
chr10	17772547	.	ATG	A	5396.41	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=0.365;DP=1055;FS=2.380;HRun=0;HaplotypeScore=386.0924;InbreedingCoeff=0.9980;MQ=51.41;MQ0=10;MQRankSum=-2.839;QD=24.20;ReadPosRankSum=-3.136;VQSLOD=3.4072;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:67.66:0,68,1332	0/0:19,0:19:48.16:0,48,815	0/0:33,0:16:36:0,36,532	0/0:40,0:25:37.09:0,37,606	0/0:26,0:26:69.23:0,69,1150	0/0:24,0:24:41.98:0,42,902	0/0:45,0:42:90.10:0,90,1459	1/1:21,28:48:99:1344,108,0	1/1:6,38:44:93.16:1208,93,0	0/0:53,0:52:99:0,126,2148	0/0:20,0:20:48.08:0,48,800	0/0:41,0:39:87.28:0,87,1450	0/0:37,0:36:81.17:0,81,1338	0/0:60,0:58:99:0,105,1782	0/0:47,0:46:93.23:0,93,1524	0/0:36,0:36:84.29:0,84,1427	0/0:28,0:28:68.34:0,68,1134	0/0:37,0:37:93.96:0,94,1666	1/1:10,8:14:18.06:234,18,0	1/1:2,22:24:69.12:874,69,0	1/1:29,59:86:99:1736,138,0	0/0:33,0:33:75.26:0,75,1265	0/0:23,0:22:60.19:0,60,992	0/0:60,0:60:99:0,120,2013	0/0:31,0:31:47.12:0,47,997	0/0:53,0:53:99:0,147,2381	0/0:20,0:19:60.14:0,60,968	0/0:14,0:14:39.09:0,39,601
chr10	17772799	.	GT	G	5917.22	PASS	AB=0.995;AC=17;AF=0.304;AN=56;BaseQRankSum=4.651;DP=898;FS=10.716;HRun=1;HaplotypeScore=188.1766;InbreedingCoeff=0.3935;MQ=55.75;MQ0=20;MQRankSum=-0.116;QD=14.12;ReadPosRankSum=4.076;VQSLOD=3.6044;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:38,0:37:54.22:54,0,130	0/0:6,0:6:12.03:0,12,175	0/0:51,1:12:29.04:0,29,285	0/0:60,0:15:11.13:0,11,267	0/0:15,0:15:29.86:0,30,350	0/0:25,0:25:63.12:0,63,823	0/0:50,0:50:99:0,118,1546	1/1:13,21:31:80.69:973,81,0	0/1:52,0:50:45.33:45,0,375	0/0:37,0:37:99:0,111,1314	0/0:15,0:14:35.93:0,36,470	0/1:24,0:24:43.18:62,0,43	0/1:22,0:21:41.37:115,0,41	0/1:30,0:30:43.38:104,0,43	0/0:36,0:36:96.26:0,96,1300	0/0:23,0:23:66.11:0,66,818	0/0:42,0:42:99:0,114,1533	0/0:30,0:30:80.25:0,80,1086	1/1:4,19:22:56.81:700,57,0	1/1:0,15:15:26.41:280,26,0	1/1:23,88:106:99:3492,266,0	0/1:26,1:26:35.18:35,0,95	1/1:11,0:10:11.44:37,11,0	0/1:31,0:28:20.25:20,0,134	0/0:22,0:22:43.90:0,44,589	0/0:41,0:41:99:0,111,1473	0/0:12,0:12:36.10:0,36,486	0/0:11,0:11:33.07:0,33,429
chr10	17772800	.	TG	T	4736.41	PASS	AB=0.689;AC=23;AF=0.411;AN=56;BaseQRankSum=4.555;DP=902;FS=5.415;HRun=7;HaplotypeScore=194.2336;InbreedingCoeff=0.9150;MQ=55.76;MQ0=19;MQRankSum=1.601;QD=11.28;ReadPosRankSum=2.828;VQSLOD=2.2413;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,24:36:44.86:517,45,0	0/0:6,0:6:18:0,18,196	0/0:51,0:12:28.69:0,29,268	0/0:60,0:15:20.82:0,21,243	0/0:15,0:15:24.03:0,24,296	0/0:24,0:24:54.13:0,54,653	0/0:50,0:51:99:0,107,1255	1/1:32,0:31:54.88:295,55,0	0/1:28,22:49:24.41:404,0,24	0/0:37,0:37:75.24:0,75,932	0/0:16,0:15:36.06:0,36,422	1/1:5,19:24:36.02:367,36,0	1/1:5,18:22:45.09:459,45,0	1/1:9,20:29:51.11:520,51,0	0/0:37,0:37:87.17:0,87,1031	0/0:23,0:23:51.16:0,51,631	0/0:43,0:43:99:0,101,1245	0/0:29,0:31:37.55:0,38,807	1/1:25,0:23:47.40:254,47,0	1/1:16,0:16:14.04:77,14,0	1/1:104,2:105:99:1274,192,0	1/1:6,21:26:11.61:119,12,0	1/1:3,9:11:17.25:175,17,0	1/1:12,20:29:26.76:275,27,0	0/0:21,0:21:37.16:0,37,454	0/0:43,0:43:99:0,99,1203	0/0:12,0:12:33.08:0,33,397	0/0:10,0:10:30.10:0,30,374
chr10	17772807	.	GT	G	585.87	PASS	AB=0.974;AC=10;AF=0.179;AN=56;BaseQRankSum=4.260;DP=906;FS=5.405;HRun=1;HaplotypeScore=206.7684;InbreedingCoeff=0.0825;MQ=54.93;MQ0=27;MQRankSum=-1.348;QD=2.55;ReadPosRankSum=2.429;VQSLOD=-0.2049;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:37,2:37:62.49:86,0,62	0/0:6,0:6:18.06:0,18,249	0/0:63,0:14:35.02:0,35,356	0/0:67,0:14:26.49:0,26,285	0/0:16,0:16:30:0,30,380	0/0:24,0:24:63.16:0,63,838	0/0:51,0:51:99:0,107,1422	0/0:42,0:35:66.22:0,66,378	0/1:45,2:45:99:154,0,285	0/0:32,0:30:87.12:0,87,1129	0/0:18,0:17:45.10:0,45,560	0/1:20,1:21:36.24:74,0,36	0/1:20,0:19:7.20:146,0,7	0/1:22,2:24:6.22:136,0,6	0/0:33,0:33:81.12:0,81,1103	0/0:20,0:20:56.54:0,57,773	0/0:43,0:42:99:0,117,1529	0/0:33,0:33:83.44:0,83,1102	0/0:25,0:23:46.39:0,46,243	0/1:16,0:16:24.67:25,0,50	0/0:113,0:107:99:0,103,726	0/1:25,0:22:39.36:39,0,46	1/1:12,0:10:12.24:46,12,0	0/1:26,0:24:28.87:29,0,40	0/0:19,0:19:28.99:0,29,481	0/0:45,0:43:99:0,114,1481	0/0:12,0:12:33.04:0,33,424	0/0:11,0:11:33.07:0,33,456
chr10	17772823	.	AGT	A	6888.59	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=3.845;DP=932;FS=2.880;HRun=0;HaplotypeScore=189.3435;InbreedingCoeff=0.9379;MQ=51.23;MQ0=51;MQRankSum=0.463;QD=20.81;ReadPosRankSum=1.829;VQSLOD=4.8733;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:21,12:31:32.39:484,32,0	0/0:7,0:7:21.03:0,21,282	0/0:74,1:11:0.94:0,1,100	0/0:88,0:12:2.92:0,3,78	0/0:18,0:16:33.09:0,33,510	1/1:4,24:28:53.61:665,54,0	1/1:7,36:44:56.67:793,57,0	0/0:49,0:36:69.16:0,69,1052	0/0:28,0:32:58.48:0,58,687	0/0:31,0:29:78.12:0,78,1092	0/0:21,0:20:39.13:0,39,615	1/1:10,11:21:44.87:532,45,0	1/1:12,13:24:50.52:617,51,0	1/1:9,11:20:45.14:557,45,0	1/1:8,15:23:55.02:654,55,0	1/1:9,9:18:35.83:406,36,0	0/0:41,0:38:92.76:0,93,1432	1/1:16,13:30:55.86:884,56,0	0/0:30,0:22:39.05:0,39,596	0/0:14,0:14:24.07:0,24,379	0/0:117,0:110:99:0,238,3695	1/1:14,13:24:26.99:337,27,0	1/1:11,2:10:11.77:127,12,0	1/1:16,14:28:36.10:451,36,0	1/1:6,12:18:30.09:381,30,0	0/0:44,0:40:93.19:0,93,1450	0/0:9,0:9:23.97:0,24,349	0/0:21,0:20:51.10:0,51,741
chr10	17772835	.	TGA	T	2339.93	PASS	AB=0.988;AC=19;AF=0.339;AN=56;BaseQRankSum=10.188;DP=996;FS=1.410;HRun=0;HaplotypeScore=210.0191;InbreedingCoeff=0.2010;MQ=52.22;MQ0=64;MQRankSum=1.825;QD=4.21;ReadPosRankSum=4.912;VQSLOD=2.5288;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:31:58.95:142,0,59	0/0:8,0:7:15.01:0,15,213	0/1:87,0:17:5.27:5,0,62	0/1:94,0:8:31.58:32,0,42	0/0:20,0:18:25.85:0,26,581	0/1:29,0:29:12.77:193,0,13	0/1:48,1:48:81.21:231,0,81	0/0:60,0:46:80.54:0,81,1229	0/0:28,2:29:9.85:0,10,584	0/0:33,0:31:87.02:0,87,1249	0/0:18,0:18:42.12:0,42,760	0/1:26,0:26:5.50:210,0,5	1/1:28,0:27:45.36:325,45,0	0/1:24,0:23:29.28:228,0,29	0/1:29,0:28:25.41:192,0,25	0/1:18,1:19:44.72:118,0,45	0/0:37,0:34:93.20:0,93,1593	1/1:31,0:31:42.06:347,42,0	0/0:32,0:24:43.02:0,43,801	0/0:16,0:16:21.03:0,21,438	0/0:115,0:107:99:0,242,4208	1/1:30,0:27:24.87:148,25,0	0/1:15,0:12:17.62:36,0,18	0/1:33,1:32:1:160,0,1	1/1:24,0:24:20.56:157,21,0	0/0:42,0:38:94.98:0,95,1547	0/0:8,0:8:24.06:0,24,401	0/0:21,0:20:54.07:0,54,785
chr10	17772885	.	GGT	G	3661.67	PASS	AB=0.667;AC=10;AF=0.185;AN=54;BaseQRankSum=0.816;DP=1027;FS=0.831;HRun=0;HaplotypeScore=191.5798;InbreedingCoeff=0.7230;MQ=45.05;MQ0=129;MQRankSum=5.761;QD=19.37;ReadPosRankSum=4.053;VQSLOD=3.7952;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:42:71.12:0,71,951	0/0:15,0:14:36.07:0,36,558	./.	0/0:83,0:6:2.99:0,3,24	0/0:24,0:21:40.17:0,40,587	1/1:14,12:25:48.11:602,48,0	1/1:34,8:39:5.17:903,5,0	0/0:53,0:42:96.02:0,96,1423	0/0:29,0:22:11.10:0,11,92	0/0:43,0:35:84.15:0,84,1273	0/0:17,0:16:37.61:0,38,561	0/0:28,0:25:35.50:0,36,386	0/0:38,0:36:62.02:0,62,703	0/0:34,0:27:46.57:0,47,494	0/1:10,20:25:2.77:393,0,3	1/1:6,18:24:26.85:490,27,0	0/0:37,0:32:73.49:0,73,1168	0/1:23,13:34:25.96:804,0,26	0/0:36,0:16:15.07:0,15,466	0/0:22,0:21:41.88:0,42,546	0/0:105,0:95:99:0,188,2952	0/0:35,0:31:38.76:0,39,494	0/0:17,0:15:15.79:0,16,230	0/0:46,0:39:23.47:0,23,462	1/1:9,21:23:35.96:468,36,0	0/0:36,0:28:71.96:0,72,1052	0/0:13,0:11:24.08:0,24,363	0/0:14,0:13:35.86:0,36,535
chr10	17772895	.	TG	T	200.63	PASS	AB=1.000;AC=3;AF=0.056;AN=54;BaseQRankSum=6.665;DP=1055;FS=2.300;HRun=2;HaplotypeScore=196.4655;InbreedingCoeff=0.5054;MQ=45.27;MQ0=124;MQRankSum=-1.968;QD=3.13;ReadPosRankSum=-2.205;VQSLOD=-0.6309;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:41:40.94:0,41,735	0/0:16,0:15:29.90:0,30,524	./.	0/0:71,6:6:14.77:0,15,144	0/0:22,1:20:35.52:0,36,636	0/0:28,0:27:27.61:0,28,165	0/0:40,0:37:14.04:0,14,229	0/0:57,0:46:67.14:0,67,1283	1/1:18,9:20:14.19:243,14,0	0/0:46,0:38:99:0,109,1403	0/0:18,0:17:40.92:0,41,529	0/0:31,0:28:41.49:0,41,406	0/0:39,1:37:60.11:0,60,625	0/0:33,0:26:53.13:0,53,494	0/0:30,0:25:19.68:0,20,112	0/0:28,0:27:33.47:0,33,256	0/0:33,2:31:85.41:0,85,1129	0/1:37,0:34:58.29:58,0,136	0/0:41,0:21:10.49:0,10,512	0/0:27,0:25:51.07:0,51,586	0/0:113,2:106:99:0,216,2959	0/0:42,0:37:39.31:0,39,424	0/0:19,0:17:0.99:0,1,182	0/0:46,0:38:30.63:0,31,348	0/0:33,0:26:23.93:0,24,141	0/0:43,0:34:93.93:0,94,1219	0/0:14,0:13:29.59:0,30,433	0/0:15,0:14:35.15:0,35,470
chr10	17772899	.	GT	G	135.16	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.602;DP=1073;FS=0.000;HRun=1;HaplotypeScore=195.4628;InbreedingCoeff=0.7901;MQ=46.07;MQ0=122;MQRankSum=-1.490;QD=5.01;ReadPosRankSum=0.202;VQSLOD=-0.0485;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:41:71.57:0,72,787	0/0:18,0:17:41.95:0,42,623	0/0:44,0:1:3.01:0,3,38	0/0:71,0:9:18.53:0,19,255	0/0:25,0:22:45.47:0,45,723	0/0:28,0:27:59.22:0,59,825	0/0:40,0:37:92.93:0,93,1203	0/0:58,0:47:99:0,103,1388	1/1:19,7:20:11.92:221,12,0	0/0:48,0:40:99:0,108,1546	0/0:20,0:19:49.36:0,49,669	0/0:35,0:30:35.28:0,35,363	0/0:41,0:38:49.65:0,50,444	0/0:36,0:30:49.30:0,49,414	0/0:33,0:28:47.18:0,47,667	0/0:28,0:27:57.19:0,57,850	0/0:37,0:32:84.24:0,84,1252	0/0:37,0:34:86.03:0,86,1087	0/0:40,0:20:41.95:0,42,643	0/0:28,0:26:53.75:0,54,740	0/0:120,0:111:99:0,246,3448	0/0:42,0:37:38.57:0,39,392	0/0:21,0:19:11.66:0,12,181	0/0:46,0:38:38.08:0,38,395	0/0:34,0:27:51.15:0,51,737	0/0:41,0:32:96.12:0,96,1357	0/0:15,0:14:32.60:0,33,516	0/0:17,0:16:37.33:0,37,498
chr10	17772910	.	TGTGTGTGTGA	T	1469.35	PASS	AB=0.964;AC=12;AF=0.214;AN=56;BaseQRankSum=8.242;DP=986;FS=6.244;HRun=0;HaplotypeScore=288.9249;InbreedingCoeff=0.8307;MQ=48.70;MQ0=79;MQRankSum=-7.911;QD=6.00;ReadPosRankSum=0.683;VQSLOD=1.7199;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:39,1:38:20.08:344,20,0	0/0:20,0:19:36.55:0,37,1226	0/0:35,0:5:8.18:0,8,167	0/0:55,0:17:11.25:0,11,362	0/0:24,0:23:57.18:0,57,1744	0/0:26,0:25:48.16:0,48,1482	0/0:39,0:37:69.69:0,70,1960	0/0:57,0:48:68.74:0,69,1228	0/0:27,0:21:30.10:0,30,661	0/0:42,0:35:78.73:0,79,2724	0/0:21,0:20:45.61:0,46,1455	0/1:38,1:34:47.91:213,0,48	1/1:29,0:28:20.74:241,21,0	1/1:30,3:30:32.46:410,32,0	0/0:31,0:28:48:0,48,1156	0/0:26,0:26:48.14:0,48,1485	0/0:32,0:28:54.18:0,54,2130	0/0:31,0:28:66.20:0,66,2266	0/0:32,0:21:38.91:0,39,816	0/0:29,0:28:50.28:0,50,1421	0/0:115,0:107:99:0,172,5978	1/1:39,1:37:16.83:219,17,0	0/1:19,1:20:0.15:0,0,1	1/1:43,1:39:23.91:219,24,0	0/0:32,0:28:48.14:0,48,1540	0/0:37,0:31:76.12:0,76,2385	0/0:15,0:15:36.57:0,37,1178	0/0:15,0:15:30.10:0,30,1081
chr10	17772912	.	TGTGTGTGA	T	3449.42	PASS	AB=0.813;AC=13;AF=0.232;AN=56;BaseQRankSum=3.574;DP=970;FS=6.649;HRun=0;HaplotypeScore=255.3213;InbreedingCoeff=0.6679;MQ=49.13;MQ0=72;MQRankSum=-6.504;QD=11.98;ReadPosRankSum=0.932;VQSLOD=1.4997;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:31,6:35:12.05:766,12,0	0/0:21,0:20:45.79:0,46,1241	0/0:34,0:5:8.18:0,8,150	0/1:51,0:18:1.26:1,0,416	0/0:24,0:23:59.76:0,60,1685	0/0:27,0:26:60.13:0,60,1439	0/0:38,0:36:84.08:0,84,1839	0/0:55,0:46:92.23:0,92,1591	0/0:25,0:21:30.09:0,30,460	0/0:42,0:38:99:0,103,2884	0/0:20,0:19:46.70:0,47,1305	0/1:12,29:36:75.37:350,0,75	1/1:8,21:27:23.18:595,23,0	1/1:10,23:30:17.71:763,18,0	0/0:32,0:29:57.03:0,57,1205	0/0:26,0:26:57.99:0,58,1480	0/0:32,0:28:63.19:0,63,2031	0/0:30,0:28:68.81:0,69,2019	0/0:30,0:21:56.16:0,56,893	0/0:29,0:28:56.62:0,57,1419	0/0:114,0:106:99:0,204,5864	1/1:9,28:35:16.65:418,17,0	1/1:9,9:18:2.30:15,2,0	0/1:34,7:38:30.93:541,0,31	0/0:34,0:30:63.10:0,63,1608	0/0:37,0:31:56.78:0,57,2284	0/0:16,0:16:41.92:0,42,1158	0/0:15,0:15:34:0,34,1052
chr10	17773872	.	T	TG	868.55	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.871;DP=678;FS=0.000;HRun=3;HaplotypeScore=71.1909;InbreedingCoeff=0.8060;MQ=80.07;MQ0=0;MQRankSum=-2.138;QD=33.41;ReadPosRankSum=1.945;VQSLOD=4.1512;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,114,1358	0/0:4,0:4:12.04:0,12,142	0/0:16,0:16:2.63:0,3,363	0/0:28,0:28:57.41:0,57,698	0/0:18,0:18:51.14:0,51,597	0/0:18,0:18:54.17:0,54,645	0/0:27,0:27:75.23:0,75,899	0/0:25,0:25:60.16:0,60,700	1/1:1,25:26:69.23:963,69,0	0/0:14,0:14:39.11:0,39,453	0/0:12,0:12:30.09:0,30,359	0/0:28,0:28:81.25:0,81,971	0/0:21,0:21:63.18:0,63,742	0/0:29,0:29:78.24:0,78,936	0/0:30,0:30:81.22:0,81,949	0/0:34,0:34:99:0,102,1211	0/0:22,0:22:66.20:0,66,792	0/0:32,0:32:96.29:0,96,1151	0/0:25,0:25:60.18:0,60,715	0/0:13,0:13:13.62:0,14,370	0/0:49,0:49:99:0,141,1670	0/0:22,0:22:63.18:0,63,737	0/0:15,0:15:42.13:0,42,503	0/0:43,0:42:99:0,126,1487	0/0:29,0:29:78.21:0,78,909	0/0:28,0:28:81.25:0,81,966	0/0:22,0:22:66.12:0,66,759	0/0:10,0:10:30.09:0,30,360
chr10	17775675	.	G	GC	451.03	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-4.940;DP=458;FS=5.458;HRun=3;HaplotypeScore=59.5051;InbreedingCoeff=0.9530;MQ=76.79;MQ0=0;MQRankSum=-0.944;QD=30.07;ReadPosRankSum=1.293;VQSLOD=3.3315;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:84.25:0,84,995	0/0:5,0:5:15.05:0,15,179	0/0:13,0:13:35.69:0,36,395	0/0:15,0:15:12.71:0,13,309	0/0:16,0:16:36.09:0,36,419	0/0:12,0:12:33.09:0,33,385	0/0:27,0:27:78.15:0,78,886	0/0:25,0:25:59.90:0,60,676	1/1:2,13:15:39.13:546,39,0	0/0:17,0:17:48.13:0,48,557	0/0:10,0:10:27.08:0,27,324	0/0:12,0:12:27.08:0,27,324	0/0:15,0:15:42.13:0,42,504	0/0:18,0:18:54.11:0,54,621	0/0:10,0:10:30.08:0,30,348	0/0:10,0:10:30.09:0,30,360	0/0:31,0:31:93.27:0,93,1103	0/0:27,0:27:63.17:0,63,741	0/0:18,0:18:42.12:0,42,494	0/0:9,0:9:24.02:0,24,269	0/0:22,0:22:57.17:0,57,681	0/0:16,0:16:41.97:0,42,461	0/0:18,0:18:48.14:0,48,564	0/0:16,0:16:48.13:0,48,563	0/0:14,0:14:42.09:0,42,487	0/0:12,0:12:36.10:0,36,422	0/0:15,0:15:42.10:0,42,489	0/0:9,0:9:27.08:0,27,323
chr10	17775718	.	A	AGGG	2348.83	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=2.630;DP=398;FS=3.586;HRun=9;HaplotypeScore=82.9370;InbreedingCoeff=0.9184;MQ=82.31;MQ0=0;MQRankSum=-3.540;QD=15.56;ReadPosRankSum=-5.055;VQSLOD=0.1197;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:48.11:0,48,592	0/0:6,0:6:6.61:0,7,90	0/0:21,0:20:38.44:0,38,387	0/0:21,0:18:23.07:0,23,246	0/0:6,0:6:9.01:0,9,114	1/1:6,3:9:9.03:154,9,0	1/1:26,4:30:33.08:510,33,0	1/1:6,0:11:14.91:110,15,0	1/1:5,0:5:8.99:117,9,0	0/0:14,0:14:21.01:0,21,265	0/0:8,0:8:21.06:0,21,265	0/0:11,0:11:23.99:0,24,287	0/0:8,0:8:12:0,12,152	0/0:20,0:20:29.93:0,30,338	1/1:12,1:13:30.07:507,30,0	1/1:11,0:11:15.02:230,15,0	0/0:22,0:22:60.18:0,60,758	1/1:5,16:22:24.08:449,24,0	1/1:4,1:11:20.92:212,21,0	1/1:6,0:11:8.99:85,9,0	1/1:9,0:20:10.21:72,10,0	0/0:8,0:8:21.07:0,21,263	0/0:16,0:16:36.11:0,36,450	0/0:14,0:14:36.08:0,36,438	1/1:6,2:8:6.02:118,6,0	0/0:19,0:20:36.04:0,36,435	0/0:17,0:17:36.06:0,36,455	0/0:12,0:12:26.99:0,27,293
chr10	17775928	.	CTGTGTGTG	C	1025.22	PASS	AB=0.896;AC=21;AF=0.457;AN=46;BaseQRankSum=4.040;DP=575;FS=3.833;HRun=0;HaplotypeScore=142.4981;InbreedingCoeff=0.4015;MQ=66.93;MQ0=12;MQRankSum=-4.308;QD=3.71;ReadPosRankSum=1.883;VQSLOD=2.2840;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:26:2.63:73,3,0	0/0:4,0:12:11.97:0,12,301	./.	./.	0/0:15,0:17:12.03:0,12,217	1/1:11,7:18:6.02:148,6,0	1/1:26,5:31:6.02:122,6,0	0/0:15,0:15:0:0,0,0	0/0:26,0:25:9.95:0,10,236	0/0:28,0:28:22.89:0,23,503	0/0:7,0:7:9.02:0,9,238	./.	1/1:16,0:16:3.01:51,3,0	1/1:11,0:12:3.01:45,3,0	1/1:19,1:20:3.01:74,3,0	0/1:21,4:25:85.83:334,0,86	0/0:25,0:24:19.59:0,20,362	0/1:14,2:15:31.21:91,0,31	./.	./.	0/1:58,0:56:13.64:14,0,119	0/0:18,0:18:0:0,0,0	1/1:9,1:12:6.02:130,6,0	1/1:21,5:25:0.47:1,0,0	1/1:14,0:14:6.01:88,6,0	0/0:22,0:21:21.52:0,22,372	0/0:14,0:13:3.01:0,3,62	0/0:8,0:8:18.06:0,18,509
chr10	17778307	.	G	GC	23770.13	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-8.229;DP=658;FS=1.573;HRun=2;HaplotypeScore=60.8962;InbreedingCoeff=0.9794;MQ=77.45;MQ0=0;MQRankSum=-8.908;QD=37.97;ReadPosRankSum=6.369;VQSLOD=4.8555;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,41:43:99:1640,114,0	1/1:0,6:6:15.05:216,15,0	0/0:16,0:16:20.09:0,20,393	0/0:16,0:16:38.18:0,38,421	1/1:0,14:14:42.14:603,42,0	1/1:0,18:18:48.16:691,48,0	1/1:1,29:30:84.28:1209,84,0	1/1:1,18:19:54.17:758,54,0	1/1:1,29:30:78.26:1123,78,0	1/1:2,21:22:60.20:862,60,0	1/1:0,12:12:27.02:363,27,0	1/1:2,27:29:72.20:1036,72,0	1/1:1,29:30:75.10:1079,75,0	1/1:2,34:36:87.29:1251,87,0	1/1:2,24:26:63.21:907,63,0	1/1:1,30:31:84.28:1207,84,0	1/1:0,35:35:99:1425,99,0	1/1:1,29:30:84.28:1210,84,0	1/1:1,16:17:48.10:647,48,0	1/1:0,9:9:24.08:346,24,0	1/1:0,48:47:99:1857,129,0	1/1:1,20:21:51.17:732,51,0	1/1:3,11:14:29.99:419,30,0	1/1:0,32:32:87.29:1253,87,0	1/1:0,21:21:57.19:820,57,0	1/1:1,23:24:69.23:993,69,0	1/1:0,21:21:63.21:907,63,0	1/1:1,5:6:15.05:216,15,0
chr10	17778558	.	A	AG	2760.90	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-9.115;DP=522;FS=2.941;HRun=3;HaplotypeScore=61.4088;InbreedingCoeff=0.9490;MQ=83.41;MQ0=0;MQRankSum=-1.422;QD=32.87;ReadPosRankSum=-1.060;VQSLOD=3.4945;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,123,1436	0/0:4,0:4:9.03:0,9,108	0/0:10,0:11:23.75:0,24,261	0/0:23,0:23:59.14:0,59,655	0/0:10,0:10:30.09:0,30,359	0/0:10,0:10:30.06:0,30,345	0/0:30,0:30:78.22:0,78,923	1/1:1,11:12:33.08:427,33,0	0/0:6,0:6:15.05:0,15,180	0/0:16,0:16:42.13:0,42,504	0/0:8,0:8:24.07:0,24,287	0/0:18,0:18:48.15:0,48,576	0/0:13,0:13:36.11:0,36,432	0/0:27,0:27:81.25:0,81,971	0/0:20,0:20:54.16:0,54,647	0/0:15,0:15:42.13:0,42,504	0/0:19,0:19:51.16:0,51,612	0/0:35,0:35:93.26:0,93,1102	1/1:0,17:17:51.17:710,51,0	1/1:2,8:10:21.06:279,21,0	1/1:2,43:44:99:1505,108,0	0/0:12,0:12:36.11:0,36,431	0/0:12,0:12:36.11:0,36,430	0/0:57,0:57:99:0,168,1973	0/0:12,0:12:30.09:0,30,360	0/0:18,0:18:54.17:0,54,647	0/0:12,0:12:33.10:0,33,395	0/0:3,0:3:6.02:0,6,72
chr10	17778849	.	AAGAGGGGAGAGGAGG	A	1704.16	PASS	AB=1.000;AC=29;AF=0.725;AN=40;BaseQRankSum=-0.587;DP=396;FS=3.603;HRun=0;HaplotypeScore=60.7110;InbreedingCoeff=0.2345;MQ=38.02;MQ0=145;MQRankSum=3.311;QD=11.67;ReadPosRankSum=2.087;VQSLOD=1.3967;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:10:6.66:296,7,0	./.	0/0:86,0:9:22.65:0,23,226	0/0:115,0:16:17.31:0,17,317	1/1:9,0:6:2.97:20,3,0	1/1:3,0:1:2.88:15,3,0	1/1:8,0:4:11.56:163,12,0	0/1:25,0:15:76.70:117,0,77	1/1:3,5:5:6.02:268,6,0	./.	./.	1/1:12,0:11:3.01:97,3,0	1/1:11,0:5:3.01:96,3,0	./.	1/1:7,0:3:6.02:137,6,0	1/1:3,0:3:3.01:61,3,0	0/1:8,0:8:77.31:103,0,77	1/1:2,0:2:5.83:34,6,0	0/0:8,0:4:3:0,3,25	1/1:6,0:5:8.89:59,9,0	0/1:12,0:11:52.07:118,0,52	1/1:7,0:5:2.61:76,3,0	0/0:9,0:9:5.91:0,6,38	./.	./.	1/1:8,0:6:1.97:177,2,0	./.	./.
chr10	17778850	.	AGAGGGGAGAGGAGGG	A	2931.64	PASS	AB=0.758;AC=34;AF=0.895;AN=38;BaseQRankSum=-4.984;DP=403;FS=1.161;HRun=0;HaplotypeScore=59.8004;InbreedingCoeff=0.1821;MQ=38.00;MQ0=144;MQRankSum=3.238;QD=10.74;ReadPosRankSum=1.940;VQSLOD=1.5054;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:11:27.09:516,27,0	./.	0/0:85,0:9:16.50:0,16,228	0/1:112,0:17:6.15:6,0,354	1/1:4,5:6:5.99:60,6,0	1/1:4,0:1:3.01:36,3,0	1/1:8,0:4:12.04:247,12,0	1/1:15,11:15:27.06:375,27,0	1/1:8,0:5:6.02:232,6,0	./.	./.	1/1:4,8:11:3.01:118,3,0	1/1:11,0:5:3.01:121,3,0	1/1:4,0:3:3.01:38,3,0	1/1:8,0:4:9.03:215,9,0	1/1:4,0:4:6.02:118,6,0	0/1:1,7:8:57.35:121,0,57	1/1:3,0:3:9.03:123,9,0	./.	1/1:2,4:5:12.01:141,12,0	1/1:13,0:11:6.02:171,6,0	1/1:2,5:5:2.61:95,3,0	./.	./.	./.	1/1:3,5:6:15.05:312,15,0	./.	./.
chr10	17782307	.	T	TTC	1088.68	PASS	AB=0.942;AC=34;AF=0.680;AN=50;BaseQRankSum=-2.396;DP=579;FS=9.499;HRun=0;HaplotypeScore=102.4651;InbreedingCoeff=-0.0026;MQ=59.07;MQ0=21;MQRankSum=1.457;QD=2.39;ReadPosRankSum=1.415;VQSLOD=1.5612;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:34,1:35:11.98:135,12,0	0/1:7,0:7:0:0,0,0	./.	0/1:67,0:22:0:0,0,0	./.	1/1:5,0:5:2.93:18,3,0	1/1:16,0:16:5.83:54,6,0	1/1:29,0:27:0.89:2,1,0	1/1:20,0:20:3:25,3,0	0/1:19,0:18:5.45:62,0,5	0/1:16,0:16:0:0,0,0	0/1:14,1:14:34.77:35,0,35	1/1:13,0:12:6:40,6,0	0/1:16,0:16:7.25:14,0,7	1/1:14,0:14:15.01:163,15,0	0/1:18,0:18:10.20:82,0,10	1/1:16,0:15:10.93:60,11,0	0/1:26,0:23:14.91:147,0,15	0/0:19,0:18:2.97:0,3,20	./.	0/0:25,0:25:2.49:0,2,13	1/1:19,0:19:5.82:36,6,0	0/1:12,3:16:0:0,0,0	0/1:15,7:25:31.80:89,0,32	1/1:11,0:11:3.01:44,3,0	1/1:27,0:27:17.59:139,18,0	0/1:13,0:12:3.05:36,0,3	0/1:8,0:10:31.62:32,0,53
chr10	17782481	.	TCCTC	T	12174.18	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=15.489;DP=677;FS=6.124;HRun=0;HaplotypeScore=115.0954;InbreedingCoeff=0.9878;MQ=57.47;MQ0=6;MQRankSum=-2.398;QD=34.10;ReadPosRankSum=4.485;VQSLOD=4.6974;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,33:44:78.14:1252,78,0	1/1:2,8:10:24.08:414,24,0	0/0:41,0:17:19.61:0,20,521	0/0:51,0:19:21.18:0,21,531	1/1:4,13:17:32.97:460,33,0	0/0:16,0:16:42.10:0,42,982	0/0:26,0:26:60.21:0,60,1431	0/0:23,0:22:36.06:0,36,724	1/1:2,16:18:42.14:725,42,0	1/1:4,23:27:66.18:1100,66,0	1/1:3,14:17:39.13:673,39,0	1/1:1,11:11:18.06:311,18,0	1/1:3,21:24:54.18:932,54,0	1/1:3,20:23:45.07:777,45,0	0/0:20,0:20:54.19:0,54,1365	0/0:23,0:23:8.42:0,8,1278	1/1:5,27:32:45.15:777,45,0	0/0:18,0:18:48.64:0,49,1198	0/0:17,0:17:48.15:0,48,1102	0/0:13,0:13:30.10:0,30,732	0/0:41,0:41:99:0,99,2370	1/1:4,24:28:69.15:1112,69,0	1/1:2,14:16:29.61:485,30,0	1/1:4,33:37:68.97:1189,69,0	0/0:27,0:27:66.22:0,66,1579	1/1:3,15:18:45.15:774,45,0	1/1:4,14:18:36.12:622,36,0	1/1:3,13:16:33.11:570,33,0
chr10	17784047	.	TA	T	2775.81	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=-7.843;DP=587;FS=5.542;HRun=9;HaplotypeScore=108.3348;InbreedingCoeff=0.9089;MQ=75.05;MQ0=0;MQRankSum=-0.469;QD=18.63;ReadPosRankSum=3.603;VQSLOD=3.3794;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:66.20:0,66,761	0/0:8,0:8:24.06:0,24,268	0/1:13,0:13:6.83:7,0,194	0/0:13,0:14:26.80:0,27,250	0/0:31,0:31:52.87:0,53,808	1/1:1,19:20:54.03:494,54,0	1/1:3,20:23:57.03:522,57,0	0/0:6,0:28:67.92:0,68,349	0/0:23,0:23:54.15:0,54,613	0/0:24,0:24:48.14:0,48,551	0/0:16,0:16:39.12:0,39,448	0/0:17,0:17:33.10:0,33,380	0/0:24,0:24:66.19:0,66,753	0/0:27,0:27:72.21:0,72,830	1/1:3,16:19:45.02:412,45,0	1/1:5,20:25:28.41:514,28,0	0/0:35,0:35:81.23:0,81,926	1/1:5,17:22:48.02:439,48,0	0/0:9,0:27:66.92:0,67,406	0/0:3,0:16:37.23:0,37,214	0/0:0,0:4:11.36:0,11,58	0/0:15,0:15:42.12:0,42,485	0/0:15,0:15:42.12:0,42,484	0/0:26,0:26:75.21:0,75,855	1/1:3,24:27:63.03:577,63,0	0/0:23,0:23:69.21:0,69,796	0/0:21,0:21:54.16:0,54,623	0/0:14,0:14:39.12:0,39,450
chr10	17784074	.	CTGTT	C	15020.72	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=1.001;DP=633;FS=2.690;HRun=0;HaplotypeScore=124.6096;InbreedingCoeff=0.9915;MQ=79.14;MQ0=1;MQRankSum=-5.718;QD=42.67;ReadPosRankSum=7.273;VQSLOD=5.0659;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,28:30:66.16:1147,66,0	1/1:0,8:8:24.08:431,24,0	0/0:21,0:19:54.18:0,54,1322	0/0:17,0:17:39.13:0,39,928	1/1:3,23:26:57.04:934,57,0	0/0:25,0:25:66.23:0,66,1684	0/0:34,0:34:96.32:0,96,2430	0/0:30,0:30:75.25:0,75,1868	1/1:2,17:18:45.15:809,45,0	1/1:3,26:29:78.27:1401,78,0	1/1:1,12:13:33.11:590,33,0	1/1:0,11:11:27.09:482,27,0	1/1:0,22:22:60.21:1078,60,0	1/1:3,21:24:60.21:1078,60,0	0/0:24,0:24:69.24:0,69,1793	0/0:25,0:25:69.22:0,69,1710	1/1:3,35:38:9.33:1432,9,0	0/0:21,0:21:51.18:0,51,1297	0/0:28,0:28:81.22:0,81,1935	0/0:16,0:16:39.13:0,39,1012	0/0:10,0:10:30.09:0,30,727	1/1:2,12:14:36.12:647,36,0	1/1:4,20:24:57.11:987,57,0	1/1:3,28:31:68.97:1236,69,0	0/0:30,0:30:84.29:0,84,2167	1/1:3,25:28:75.26:1347,75,0	1/1:1,25:26:58.30:991,58,0	1/1:1,8:9:24.08:431,24,0
chr10	17784618	.	AG	A	2244.81	PASS	AB=0.662;AC=30;AF=0.536;AN=56;BaseQRankSum=9.483;DP=541;FS=2.654;HRun=2;HaplotypeScore=108.6775;InbreedingCoeff=0.7761;MQ=65.98;MQ0=38;MQRankSum=-7.686;QD=10.74;ReadPosRankSum=3.652;VQSLOD=2.1515;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:15:10.39:86,10,0	1/1:7,0:7:6:51,6,0	0/0:71,0:23:59.66:0,60,681	0/0:96,0:25:51.33:0,51,566	1/1:6,12:18:18.02:195,18,0	0/0:18,0:17:45.02:0,45,611	0/0:16,0:14:33.07:0,33,449	0/0:24,0:23:57.58:0,58,730	1/1:4,8:9:24.05:257,24,0	0/1:7,11:13:2.53:354,0,3	1/1:13,2:14:12.02:133,12,0	1/1:6,5:11:20.04:245,20,0	1/1:5,6:9:19.61:223,20,0	1/1:4,4:6:6.01:61,6,0	0/0:13,0:13:27.08:0,27,374	0/0:8,0:8:20.43:0,20,263	1/1:12,1:9:8.99:95,9,0	0/0:10,0:9:25.64:0,26,358	0/0:18,0:15:45.15:0,45,632	0/0:14,0:13:32.91:0,33,429	0/0:23,0:20:33.48:0,33,488	1/1:5,10:12:18.04:205,18,0	1/1:7,7:11:12:111,12,0	1/1:8,0:8:3.01:37,3,0	0/0:21,0:21:40.84:0,41,579	0/1:11,8:15:41.95:275,0,42	1/1:10,0:10:6.88:54,7,0	1/1:9,1:9:6.02:75,6,0
chr10	17784619	.	G	GA	2735.55	PASS	AB=0.897;AC=30;AF=0.536;AN=56;BaseQRankSum=9.618;DP=545;FS=5.364;HRun=1;HaplotypeScore=110.9631;InbreedingCoeff=0.7872;MQ=66.31;MQ0=37;MQRankSum=-7.541;QD=13.15;ReadPosRankSum=3.355;VQSLOD=2.9505;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,14:15:13.82:95,14,0	1/1:1,6:7:6.02:95,6,0	0/0:71,0:23:60.01:0,60,678	0/0:96,0:26:50.54:0,51,531	1/1:12,5:17:18.04:234,18,0	0/0:19,0:18:45.02:0,45,578	0/0:16,0:14:33.07:0,33,435	0/0:26,0:25:59.10:0,59,733	1/1:13,1:11:24.07:308,24,0	0/1:16,2:13:0.99:398,0,1	1/1:2,13:14:12.04:156,12,0	1/1:9,3:12:23.09:270,23,0	1/1:9,2:9:19.61:224,20,0	1/1:6,1:5:6.02:85,6,0	0/0:13,0:13:27.07:0,27,355	0/0:8,0:8:20.09:0,20,260	1/1:6,9:11:11.86:131,12,0	0/0:10,0:9:25.63:0,26,337	0/0:18,0:15:45.13:0,45,592	0/0:14,0:13:32.64:0,33,411	0/0:23,0:20:33.10:0,33,456	1/1:12,4:13:18.05:222,18,0	1/1:7,7:11:12.04:180,12,0	1/1:2,7:8:3:37,3,0	0/0:22,0:22:40.85:0,41,546	0/1:15,2:14:31.90:345,0,32	1/1:1,8:9:6.02:95,6,0	1/1:4,5:7:6.02:73,6,0
chr10	17784666	.	TTTTG	T	230.02	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.180;DP=420;FS=12.507;HRun=0;HaplotypeScore=122.8796;InbreedingCoeff=0.7598;MQ=65.89;MQ0=10;MQRankSum=-3.251;QD=23.00;ReadPosRankSum=0.945;VQSLOD=2.8770;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:18.05:0,18,299	0/0:7,0:7:17.77:0,18,157	0/0:20,0:11:18.06:0,18,402	0/0:24,0:18:13.29:0,13,526	0/0:23,0:23:62.83:0,63,1024	0/0:18,0:18:48.15:0,48,1097	0/0:15,0:15:36.12:0,36,859	0/0:39,0:39:76.42:0,76,1562	1/1:4,6:10:21.07:322,21,0	0/0:18,0:16:47.17:0,47,747	0/0:22,0:21:39.09:0,39,633	0/0:12,0:12:22.79:0,23,470	0/0:5,0:4:6.02:0,6,98	0/0:5,0:4:12.04:0,12,244	0/0:11,0:11:30.10:0,30,723	0/0:9,0:9:27.09:0,27,680	0/0:9,0:8:15.05:0,15,327	0/0:13,0:13:36.12:0,36,839	0/0:17,0:16:30.10:0,30,582	0/0:20,0:20:38.53:0,39,1228	0/0:10,0:10:18.03:0,18,315	0/0:20,0:18:54.13:0,54,811	0/0:18,0:15:41.29:0,41,716	0/0:11,0:11:12.04:0,12,255	0/0:19,0:19:51.17:0,51,1089	0/0:17,0:16:35.91:0,36,502	0/0:12,0:12:22.78:0,23,354	0/0:5,0:4:9.03:0,9,164
chr10	17784691	.	GTTTTTT	G	8311.54	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=0.661;DP=461;FS=16.781;HRun=9;HaplotypeScore=108.8141;InbreedingCoeff=0.9604;MQ=47.84;MQ0=21;MQRankSum=-5.931;QD=36.61;ReadPosRankSum=0.585;VQSLOD=1.5373;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,4:11:28.26:400,28,0	1/1:0,9:9:17.95:344,18,0	0/0:22,0:5:9.47:0,9,90	0/0:36,0:7:14.94:0,15,171	1/1:21,10:31:79.82:1233,80,0	0/0:17,0:17:48.04:0,48,1301	0/0:15,0:15:36.11:0,36,893	0/0:27,0:26:48.22:0,48,612	1/1:11,0:11:18.45:271,18,0	1/1:14,8:20:55.33:876,55,0	1/1:15,6:21:47.72:757,48,0	1/1:7,4:11:16.06:464,16,0	1/1:6,0:5:13.90:135,14,0	1/1:6,0:6:15.05:233,15,0	0/0:13,0:13:36.11:0,36,889	0/0:15,0:15:42.10:0,42,891	1/1:9,1:9:9.12:224,9,0	0/0:19,0:19:57.14:0,57,1457	0/0:15,0:13:35.89:0,36,573	0/0:22,0:25:57.69:0,58,993	0/0:10,0:7:9.29:0,9,110	1/1:17,7:22:46.66:978,47,0	1/1:14,6:19:33.62:756,34,0	1/1:8,0:8:20.90:297,21,0	0/0:19,0:20:48.16:0,48,1521	1/1:6,5:10:27.09:502,27,0	1/1:16,3:18:39.13:648,39,0	1/1:4,1:5:12:193,12,0
chr10	17784695	.	TTTTTTG	T	5811.84	PASS	AB=0.979;AC=34;AF=0.607;AN=56;BaseQRankSum=5.134;DP=465;FS=8.608;HRun=0;HaplotypeScore=116.0704;InbreedingCoeff=0.6365;MQ=47.63;MQ0=21;MQRankSum=-4.398;QD=20.04;ReadPosRankSum=-1.402;VQSLOD=3.5684;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:13:22.78:247,23,0	1/1:9,0:9:15.94:244,16,0	0/0:23,0:4:7.19:0,7,65	0/0:38,0:6:5.33:0,5,33	1/1:29,1:30:72.17:845,72,0	0/0:16,0:16:44.54:0,45,1033	0/0:16,0:16:35.84:0,36,646	0/1:26,0:25:99:118,0,237	1/1:12,0:12:22.85:237,23,0	1/1:22,0:20:53.32:586,53,0	1/1:21,0:21:47.89:571,48,0	0/1:10,1:11:4.73:311,0,5	1/1:8,0:7:10.84:85,11,0	1/1:7,0:6:14.93:146,15,0	0/0:12,0:12:29.89:0,30,668	0/0:14,0:14:41.95:0,42,693	1/1:11,0:10:14.66:144,15,0	0/0:20,0:20:53.64:0,54,1221	0/0:16,0:14:2.40:0,2,259	0/1:25,0:25:49.52:50,0,441	0/1:10,0:7:25.65:26,0,34	1/1:25,1:25:30.67:620,31,0	1/1:16,0:15:41.44:503,41,0	1/1:7,1:8:20.93:208,21,0	0/0:20,0:20:48.16:0,48,1208	1/1:11,0:10:26.99:324,27,0	1/1:18,0:17:38.80:395,39,0	1/1:4,1:5:9.03:152,9,0
chr10	17784696	.	TTTTTG	T	4729.37	PASS	AB=1.000;AC=34;AF=0.607;AN=56;BaseQRankSum=6.086;DP=465;FS=7.392;HRun=0;HaplotypeScore=112.3638;InbreedingCoeff=0.5007;MQ=47.55;MQ0=22;MQRankSum=-4.350;QD=15.41;ReadPosRankSum=-0.399;VQSLOD=3.9230;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:13:11.26:195,11,0	1/1:9,0:9:5.92:161,6,0	0/0:22,0:4:9.43:0,9,69	0/0:39,0:6:8.44:0,8,52	1/1:30,0:30:55.41:676,55,0	0/0:16,0:16:34.47:0,34,879	0/0:15,0:15:36.03:0,36,580	0/1:26,0:25:99:174,0,169	1/1:8,4:12:12.89:276,13,0	1/1:22,0:20:40.60:468,41,0	1/1:20,1:21:34.85:456,35,0	0/1:11,0:11:4.56:242,0,5	0/1:8,0:7:3.19:53,0,3	1/1:7,0:6:14.93:132,15,0	0/0:12,0:12:29.88:0,30,589	0/0:14,0:14:41.94:0,42,655	1/1:11,0:10:1.63:100,2,0	0/0:20,0:20:53.43:0,53,1046	0/1:17,0:15:14.23:14,0,203	0/1:25,0:25:99:111,0,282	0/1:10,0:7:22.37:26,0,22	1/1:26,0:25:5.59:422,6,0	1/1:15,1:15:39.56:374,40,0	1/1:8,0:8:19.63:174,20,0	0/0:20,0:20:48.16:0,48,1017	1/1:11,0:10:26.97:254,27,0	1/1:18,0:17:34.85:285,35,0	1/1:4,1:5:9.03:139,9,0
chr10	17784702	.	T	TTG	868.17	PASS	AB=0.640;AC=6;AF=0.107;AN=56;BaseQRankSum=-2.989;DP=479;FS=25.318;HRun=0;HaplotypeScore=110.4364;InbreedingCoeff=0.4831;MQ=52.84;MQ0=21;MQRankSum=2.555;QD=11.89;ReadPosRankSum=-0.729;VQSLOD=1.4195;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:14:31.66:0,32,278	0/0:9,0:9:18.04:0,18,192	0/0:26,0:5:5.07:0,5,62	0/0:41,0:7:6.70:0,7,40	0/0:31,0:31:77.80:0,78,776	0/0:18,0:18:53.95:0,54,608	0/0:17,0:17:37.96:0,38,333	0/1:10,12:21:47.83:249,0,48	0/0:10,0:10:24.25:0,24,144	0/0:26,0:24:41.62:0,42,472	0/0:24,0:24:55.16:0,55,476	0/0:12,0:12:29.58:0,30,239	0/0:9,0:8:14.58:0,15,119	0/0:6,0:6:11.97:0,12,102	0/0:10,0:10:29.80:0,30,339	0/0:14,0:14:41.97:0,42,423	0/0:10,0:10:19.54:0,20,182	0/0:19,0:19:44.57:0,45,604	0/1:8,10:17:49.26:222,0,49	1/1:8,14:24:22.72:507,23,0	1/1:4,4:5:3.92:14,4,0	0/0:24,0:24:58.66:0,59,680	0/0:18,0:18:47.79:0,48,426	0/0:7,0:7:20.93:0,21,189	0/0:20,0:20:47.96:0,48,544	0/0:13,0:12:23.63:0,24,248	0/0:19,0:18:41.87:0,42,427	0/0:8,0:8:15.22:0,15,109
chr10	17784831	.	GA	G	1336.03	PASS	AC=30;AF=0.556;AN=54;BaseQRankSum=10.618;DP=325;FS=13.862;HRun=2;HaplotypeScore=56.3125;InbreedingCoeff=0.8336;MQ=48.46;MQ0=20;MQRankSum=-7.712;QD=13.77;ReadPosRankSum=2.323;VQSLOD=1.4241;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,1:8:14.05:86,14,0	1/1:2,0:2:3.01:37,3,0	0/0:29,1:13:24.95:0,25,403	0/0:29,0:2:6.02:0,6,90	1/1:10,1:11:14.39:124,14,0	0/0:18,0:18:33.11:0,33,494	0/0:19,0:19:54.14:0,54,751	0/0:20,0:19:54.18:0,54,809	1/1:6,0:6:9:91,9,0	1/1:12,4:15:32.89:280,33,0	1/1:7,1:8:18.83:152,19,0	1/1:3,0:3:5.96:44,6,0	1/1:4,0:4:3:29,3,0	1/1:8,0:8:14.99:144,15,0	0/0:14,0:14:42.14:0,42,618	0/0:17,0:17:30.10:0,30,449	1/1:5,0:5:14.92:119,15,0	0/0:13,0:13:33.11:0,33,494	0/0:16,0:7:15.05:0,15,224	0/0:18,0:17:51.16:0,51,738	0/0:16,0:15:36.12:0,36,538	1/1:7,0:7:14.96:118,15,0	1/1:1,0:1:2.99:24,3,0	1/1:3,1:4:0.89:30,1,0	0/0:18,0:18:39.13:0,39,579	1/1:3,1:4:11.95:95,12,0	1/1:10,0:10:23.70:170,24,0	./.
chr10	17784832	.	A	AGG	3456.29	PASS	AC=30;AF=0.556;AN=54;BaseQRankSum=9.055;DP=317;FS=7.731;HRun=2;HaplotypeScore=53.7125;InbreedingCoeff=0.8511;MQ=48.46;MQ0=20;MQRankSum=-7.510;QD=37.98;ReadPosRankSum=1.967;VQSLOD=3.2352;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,3:6:14.89:174,15,0	1/1:0,1:2:3.01:51,3,0	0/0:30,0:13:31.39:0,31,407	0/0:30,0:3:6.02:0,6,98	1/1:4,7:11:21.04:326,21,0	0/0:18,0:18:33.11:0,33,537	0/0:18,0:18:54.15:0,54,813	0/0:19,0:18:54.18:0,54,880	1/1:0,5:5:9.03:159,9,0	1/1:7,8:14:33.11:611,33,0	1/1:2,6:8:21.06:367,21,0	1/1:0,3:3:6.02:112,6,0	1/1:0,3:4:3.01:43,3,0	1/1:0,5:5:15.05:263,15,0	0/0:14,0:14:42.14:0,42,687	0/0:17,0:17:30.10:0,30,489	1/1:3,3:6:18.04:283,18,0	0/0:12,0:12:33.11:0,33,538	0/0:14,0:5:15.04:0,15,223	0/0:18,0:17:51.16:0,51,790	0/0:17,0:16:36.11:0,36,564	1/1:2,5:7:15.05:279,15,0	1/1:0,1:1:3.01:56,3,0	1/1:1,3:4:4.26:55,4,0	0/0:19,0:19:39.11:0,39,591	1/1:1,3:4:12.04:228,12,0	1/1:0,10:10:23.95:449,24,0	./.
chr10	17784848	.	GA	G	621.91	PASS	AB=0.657;AC=28;AF=0.500;AN=56;BaseQRankSum=10.060;DP=273;FS=0.653;HRun=2;HaplotypeScore=76.2483;InbreedingCoeff=0.6820;MQ=47.50;MQ0=13;MQRankSum=-7.866;QD=10.03;ReadPosRankSum=-5.061;VQSLOD=-0.4299;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,6:7:8.81:69,9,0	1/1:0,2:2:5.94:41,6,0	0/0:27,0:9:26.30:0,26,364	0/0:19,0:4:12.04:0,12,180	1/1:0,1:1:2.97:20,3,0	0/0:20,0:20:27.09:0,27,394	0/0:19,0:19:57.19:0,57,854	0/0:18,0:17:48.15:0,48,693	1/1:1,5:6:11.61:85,12,0	0/1:1,2:2:15.18:26,0,15	1/1:1,2:3:2.73:29,3,0	1/1:4,2:6:7.25:61,7,0	1/1:1,2:3:1.75:21,2,0	1/1:1,3:4:5.99:60,6,0	0/0:15,0:15:42.60:0,43,605	0/0:18,0:18:24.03:0,24,334	0/0:2,0:2:2.99:0,3,24	0/0:10,0:10:30.10:0,30,448	0/0:16,0:9:26.96:0,27,351	0/0:16,0:16:48.08:0,48,665	0/0:18,0:18:45.15:0,45,672	1/1:0,7:7:19.73:120,20,0	1/1:0,2:2:5.92:39,6,0	0/1:3,2:5:0.30:18,0,0	0/0:13,0:13:15.05:0,15,225	1/1:1,5:6:14.90:117,15,0	1/1:0,4:4:10.64:62,11,0	1/1:1,2:3:2.23:50,2,0
chr10	17784856	.	A	AG	656.60	PASS	AB=0.667;AC=29;AF=0.518;AN=56;BaseQRankSum=10.726;DP=285;FS=2.037;HRun=1;HaplotypeScore=85.3524;InbreedingCoeff=0.7570;MQ=47.78;MQ0=9;MQRankSum=-8.941;QD=8.53;ReadPosRankSum=-2.436;VQSLOD=0.2443;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,6:9:14.57:90,15,0	1/1:0,2:2:5.81:32,6,0	0/0:27,0:9:27:0,27,352	0/0:16,0:4:12.04:0,12,168	1/1:2,1:2:2.92:20,3,0	0/0:19,0:19:24.08:0,24,335	0/0:21,0:20:58.06:0,58,737	0/0:20,0:20:54.18:0,54,739	1/1:1,5:6:16.22:76,16,0	0/1:2,2:3:16.70:45,0,17	1/1:2,2:3:6.84:24,7,0	1/1:5,2:6:16.50:102,16,0	1/1:2,2:4:7.35:28,7,0	1/1:2,3:5:10.44:54,10,0	0/0:18,0:18:39.18:0,39,578	0/0:18,0:18:17.68:0,18,245	0/0:2,0:2:1.25:0,1,3	0/0:10,0:10:26.98:0,27,305	0/0:9,0:7:21.07:0,21,294	0/0:14,0:14:39.02:0,39,519	0/0:17,0:17:42.14:0,42,587	1/1:1,7:8:18.08:90,18,0	1/1:2,2:4:5.70:38,6,0	1/1:4,2:6:0.16:16,0,0	0/0:17,0:17:12.01:0,12,147	1/1:1,5:6:14.88:112,15,0	1/1:2,4:6:13.51:70,14,0	1/1:1,2:3:8.74:64,9,0
chr10	17784859	.	G	GA	2928.16	PASS	AB=0.743;AC=36;AF=0.643;AN=56;BaseQRankSum=9.445;DP=302;FS=2.570;HRun=1;HaplotypeScore=85.4606;InbreedingCoeff=0.5451;MQ=47.32;MQ0=9;MQRankSum=-6.035;QD=18.19;ReadPosRankSum=-0.752;VQSLOD=3.6973;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,2:11:15.04:173,15,0	1/1:2,0:4:9.47:91,9,0	0/0:27,0:9:27.05:0,27,309	0/0:15,0:4:12.04:0,12,155	1/1:1,1:2:2.99:32,3,0	0/0:21,0:21:21.05:0,21,254	0/1:12,8:19:99:345,0,257	0/0:20,0:20:50.94:0,51,535	1/1:2,1:8:21.05:223,21,0	1/1:1,1:3:3.74:83,4,0	1/1:3,1:5:12:120,12,0	1/1:2,4:7:18.05:205,18,0	1/1:1,2:5:15.04:168,15,0	1/1:0,2:5:15.04:166,15,0	0/1:7,12:19:99:455,0,160	0/0:16,0:16:11.51:0,12,154	1/1:0,1:2:2.94:18,3,0	0/1:4,5:9:98.64:116,0,99	0/0:9,0:8:21.03:0,21,213	0/0:14,0:14:36.01:0,36,404	0/0:19,0:19:42.06:0,42,439	1/1:2,1:10:23.99:242,24,0	1/1:0,2:4:8.98:92,9,0	1/1:5,0:6:1.23:29,1,0	0/1:18,0:18:22.78:23,0,105	1/1:1,1:7:18.01:198,18,0	1/1:2,2:8:21.05:238,21,0	1/1:0,1:3:9.03:110,9,0
chr10	17784862	.	AAGGAGG	A	3615.81	PASS	AB=0.962;AC=29;AF=0.580;AN=50;BaseQRankSum=2.248;DP=308;FS=6.620;HRun=0;HaplotypeScore=106.4192;InbreedingCoeff=0.0200;MQ=46.76;MQ0=9;MQRankSum=-1.524;QD=19.44;ReadPosRankSum=4.846;VQSLOD=2.1406;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:14,0:14:76.14:100,0,76	0/1:4,0:4:18.34:46,0,18	./.	./.	0/1:5,0:4:23.82:24,0,33	./.	1/1:22,0:21:45.09:741,45,0	0/0:11,0:17:19.49:0,19,124	0/1:9,0:9:23.85:196,0,24	1/1:4,0:3:5.97:47,6,0	0/1:6,0:5:16.31:88,0,16	1/1:8,0:7:7.47:184,7,0	0/1:5,0:5:1.09:121,0,1	1/1:5,0:5:14.92:146,15,0	1/1:19,0:19:51.06:896,51,0	0/1:5,13:18:12.06:51,0,12	0/0:2,0:2:0:0,0,0	1/1:8,0:8:15.03:225,15,0	0/0:3,0:8:14.73:0,15,90	0/0:9,0:13:12.41:0,12,94	0/0:5,0:18:29.62:0,30,194	0/1:11,0:11:14.42:248,0,14	0/1:4,0:4:6.23:53,0,6	1/1:7,0:6:3.01:37,3,0	1/1:3,15:18:3.01:53,3,0	0/1:8,0:8:13.69:129,0,14	0/1:8,0:8:28.43:140,0,28	1/1:3,0:3:9:90,9,0
chr10	17784868	.	GA	G	1724.32	PASS	AB=0.917;AC=29;AF=0.518;AN=56;BaseQRankSum=11.880;DP=314;FS=4.289;HRun=1;HaplotypeScore=96.6612;InbreedingCoeff=0.7034;MQ=46.67;MQ0=10;MQRankSum=-9.350;QD=14.02;ReadPosRankSum=0.961;VQSLOD=3.1446;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:16:24.20:199,24,0	1/1:4,0:4:0.94:38,1,0	0/0:25,0:8:24.08:0,24,335	0/0:11,0:3:9.03:0,9,128	1/1:6,0:5:9.92:63,10,0	0/0:19,0:18:12.04:0,12,170	0/0:20,0:19:51.49:0,51,480	0/0:19,0:18:40.80:0,41,423	1/1:11,0:10:21.48:157,21,0	0/1:4,2:5:27.88:72,0,28	1/1:7,0:6:13.22:100,13,0	1/1:10,0:9:20.99:183,21,0	1/1:5,0:5:13.80:109,14,0	1/1:5,5:10:23.82:187,24,0	0/0:21,0:21:47.52:0,48,467	0/0:15,0:15:8.05:0,8,78	0/1:3,0:3:16.74:17,0,37	0/0:8,0:8:17.43:0,17,185	0/0:7,0:6:8.56:0,9,37	0/0:12,0:12:29.92:0,30,289	0/0:18,0:18:22.13:0,22,215	1/1:11,0:11:30.80:239,31,0	1/1:4,0:4:11.66:86,12,0	0/1:7,0:6:4.14:17,0,4	0/0:16,0:16:5.51:0,6,52	1/1:10,0:10:24.35:201,24,0	1/1:9,0:9:22.46:144,22,0	1/1:3,1:4:12.02:122,12,0
chr10	17784871	.	G	GGA	5239.13	PASS	AB=0.779;AC=30;AF=0.536;AN=56;BaseQRankSum=9.512;DP=338;FS=1.063;HRun=0;HaplotypeScore=96.2698;InbreedingCoeff=0.7822;MQ=46.29;MQ0=10;MQRankSum=-9.644;QD=36.90;ReadPosRankSum=1.589;VQSLOD=7.1298;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,15:19:36.12:665,36,0	1/1:0,4:4:12.04:221,12,0	0/0:24,0:9:27:0,27,344	0/0:12,0:3:9.03:0,9,147	1/1:1,5:5:12.04:226,12,0	0/0:18,0:17:12.02:0,12,170	0/0:21,0:20:57.02:0,57,691	0/0:21,0:20:52.85:0,53,649	1/1:2,10:11:27.09:453,27,0	0/1:4,3:6:25.15:218,0,25	1/1:2,6:8:18.06:315,18,0	1/1:1,9:9:21.07:380,21,0	1/1:2,5:7:15.05:253,15,0	1/1:6,5:11:27.02:368,27,0	0/0:21,0:21:63.02:0,63,731	0/0:16,0:16:11.89:0,12,137	0/1:5,1:6:29.74:89,0,30	0/0:8,0:8:18.04:0,18,244	0/0:10,0:8:20.94:0,21,180	0/0:10,0:10:27.06:0,27,356	0/0:19,0:19:41.90:0,42,441	1/1:0,11:11:33.11:556,33,0	1/1:1,4:5:12.04:214,12,0	1/1:5,2:6:3.39:45,3,0	0/0:16,0:16:6.02:0,6,78	1/1:0,10:10:27.09:488,27,0	1/1:4,9:13:33:509,33,0	1/1:2,3:5:15.04:240,15,0
chr10	17785001	.	TCA	T	17290.29	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=17.759;DP=732;FS=8.648;HRun=0;HaplotypeScore=95.9142;InbreedingCoeff=0.9988;MQ=81.93;MQ0=4;MQRankSum=-8.349;QD=40.97;ReadPosRankSum=5.639;VQSLOD=6.6890;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,58:57:99:2344,144,0	1/1:0,8:8:21.07:342,21,0	0/0:25,0:25:69.11:0,69,1314	0/0:29,0:29:73.98:0,74,1471	1/1:0,28:28:57.19:887,57,0	0/0:23,0:23:66.20:0,66,1256	0/0:17,0:17:51.18:0,51,1024	0/0:32,0:32:96.28:0,96,1744	1/1:0,35:34:87.30:1404,87,0	1/1:0,33:33:93.32:1509,93,0	1/1:0,15:14:36.12:583,36,0	1/1:0,28:28:69.24:1120,69,0	1/1:1,17:17:45.15:721,45,0	1/1:0,27:27:78.27:1269,78,0	0/0:29,0:29:87.27:0,87,1683	0/0:30,1:30:44.40:0,44,1767	1/1:0,33:33:87.30:1417,87,0	0/0:21,0:21:63.22:0,63,1279	0/0:24,0:24:72.23:0,72,1386	0/0:20,0:20:60.18:0,60,1168	0/0:42,0:42:99:0,123,2436	1/1:0,24:23:57.19:924,57,0	1/1:0,20:20:54.18:876,54,0	1/1:0,33:33:75.26:1221,75,0	0/0:17,0:17:45.13:0,45,875	1/1:0,16:16:48.16:782,48,0	1/1:0,35:36:96.33:1563,96,0	1/1:0,10:10:21.07:329,21,0
chr10	17785271	.	G	GA	6284.92	PASS	AB=0.933;AC=17;AF=0.304;AN=56;BaseQRankSum=14.406;DP=616;FS=2.484;HRun=2;HaplotypeScore=177.5661;InbreedingCoeff=-0.1417;MQ=38.29;MQ0=62;MQRankSum=-10.923;QD=17.51;ReadPosRankSum=6.486;VQSLOD=4.8383;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:32,3:30:39.03:520,0,39	0/1:12,0:12:82.80:223,0,83	0/0:31,0:11:33.05:0,33,408	0/0:21,0:11:33.11:0,33,427	0/1:29,1:24:99:288,0,114	0/0:27,0:24:69.22:0,69,895	0/0:19,0:18:48.05:0,48,600	0/0:21,0:17:51.12:0,51,643	0/1:28,2:31:99:478,0,329	0/1:23,3:24:99:573,0,229	0/1:14,0:13:46.48:328,0,46	0/1:24,1:22:99:489,0,106	1/1:14,2:15:13.15:467,13,0	0/1:31,2:30:66.10:626,0,66	0/0:27,0:26:72.22:0,72,920	0/0:19,0:18:54.18:0,54,701	0/1:15,0:10:19.43:204,0,19	0/0:24,0:22:62.21:0,62,768	0/0:17,0:14:42.14:0,42,544	0/0:11,0:11:30.10:0,30,389	0/0:11,0:11:30.10:0,30,389	0/1:22,1:17:66.47:356,0,66	1/1:27,3:22:3.51:478,4,0	0/1:19,4:18:40.67:281,0,41	0/0:16,0:14:42.14:0,42,545	0/1:26,3:29:99:655,0,185	0/1:13,4:17:99:320,0,209	0/0:12,0:8:15.05:0,15,191
chr10	17785272	.	AGG	A	6148.02	PASS	AB=0.696;AC=17;AF=0.304;AN=56;BaseQRankSum=14.373;DP=623;FS=2.996;HRun=2;HaplotypeScore=187.0320;InbreedingCoeff=-0.1255;MQ=38.01;MQ0=69;MQRankSum=-9.665;QD=16.89;ReadPosRankSum=6.001;VQSLOD=2.5689;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:20,16:30:25.29:448,0,25	0/1:5,7:12:31.04:236,0,31	0/0:30,0:11:33.06:0,33,516	0/0:22,0:11:33.11:0,33,623	0/1:20,10:24:99:245,0,105	0/0:28,0:24:69.23:0,69,1291	0/0:19,0:18:51.03:0,51,840	0/0:21,0:17:51.17:0,51,956	0/1:20,11:31:99:448,0,152	0/1:13,13:24:99:570,0,101	0/1:5,9:13:24.91:307,0,25	0/1:13,13:22:48.69:507,0,49	1/1:6,11:15:33.28:499,33,0	0/1:18,15:30:24.43:605,0,24	0/0:27,0:26:72.23:0,72,1304	0/0:19,0:18:54.18:0,54,1047	0/1:9,6:10:18.45:191,0,18	0/0:23,0:21:63.19:0,63,1166	0/0:17,0:14:42.14:0,42,705	0/0:11,0:11:30.04:0,30,604	0/0:13,0:12:30.05:0,30,585	0/1:15,9:17:25.64:355,0,26	1/1:21,9:22:3.52:475,4,0	0/1:15,9:18:11.28:274,0,11	0/0:16,0:14:42.14:0,42,824	0/1:14,15:29:99:680,0,112	0/1:12,5:17:99:306,0,135	0/0:12,0:8:14.89:0,15,217
chr10	17785285	.	GGA	G	4719.16	PASS	AB=0.991;AC=16;AF=0.286;AN=56;BaseQRankSum=14.773;DP=650;FS=1.216;HRun=0;HaplotypeScore=191.7702;InbreedingCoeff=-0.2247;MQ=34.84;MQ0=114;MQRankSum=-9.811;QD=12.07;ReadPosRankSum=4.904;VQSLOD=4.7368;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:37,0:30:36.56:278,0,37	0/1:14,0:13:30.67:215,0,31	0/0:11,0:6:15.05:0,15,264	0/0:16,0:9:27.09:0,27,469	0/1:30,1:25:99:173,0,130	0/0:33,0:22:55.41:0,55,976	0/0:21,0:14:28.19:0,28,609	0/0:29,0:25:72.20:0,72,1019	0/1:32,1:33:99:367,0,262	0/1:23,1:22:99:428,0,131	0/1:17,0:14:32.97:284,0,33	0/1:30,0:24:99:377,0,118	1/1:21,1:15:10.17:430,10,0	0/1:38,1:28:65.28:539,0,65	0/0:28,0:27:63.20:0,63,1034	0/0:21,0:19:48.06:0,48,823	0/1:13,0:8:38.89:171,0,39	0/0:23,0:19:45.10:0,45,927	0/0:14,0:10:27.06:0,27,419	0/0:14,0:14:33.09:0,33,531	0/0:13,0:12:23.95:0,24,447	0/1:27,0:15:30.42:297,0,30	0/1:29,0:19:9.03:327,0,9	0/1:29,0:19:72.10:169,0,72	0/0:22,0:19:24.02:0,24,605	0/1:27,0:26:99:484,0,142	0/1:19,0:18:99:180,0,137	0/0:14,0:8:14.91:0,15,203
chr10	17785288	.	GAA	G	4580.14	PASS	AB=0.728;AC=16;AF=0.286;AN=56;BaseQRankSum=15.576;DP=652;FS=4.398;HRun=2;HaplotypeScore=188.5854;InbreedingCoeff=-0.2398;MQ=34.77;MQ0=114;MQRankSum=-8.148;QD=12.15;ReadPosRankSum=4.187;VQSLOD=2.1944;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:20,12:26:52.10:268,0,52	0/1:7,7:13:70.64:230,0,71	0/0:10,0:5:15.05:0,15,283	0/0:16,0:9:27.08:0,27,488	0/1:22,7:23:99:159,0,120	0/0:35,0:24:68.70:0,69,1098	0/0:20,1:14:13.07:0,13,661	0/0:29,0:26:78.15:0,78,1238	0/1:22,8:31:99:336,0,412	0/1:14,11:23:99:425,0,219	0/1:8,9:14:43.94:263,0,44	0/1:18,10:23:99:390,0,132	1/1:13,9:15:5.16:400,5,0	0/1:23,12:26:82.15:511,0,82	0/0:29,0:28:64.07:0,64,1122	0/0:24,0:23:60.52:0,61,1010	0/1:8,5:8:7.57:169,0,8	0/0:24,0:20:31.46:0,31,1006	0/0:14,0:10:27.07:0,27,460	0/0:14,0:14:41.88:0,42,615	0/0:13,0:12:26.79:0,27,493	0/1:19,8:14:69.54:278,0,70	0/1:20,9:19:20.41:315,0,20	0/1:18,9:17:99:155,0,139	0/0:33,0:29:72.43:0,72,914	0/1:13,13:25:99:506,0,214	0/1:12,6:17:99:176,0,189	0/0:13,0:8:15.05:0,15,244
chr10	17785302	.	GGAA	G	281.69	PASS	AB=0.991;AC=16;AF=0.381;AN=42;BaseQRankSum=1.443;DP=664;FS=0.000;HRun=0;HaplotypeScore=218.2398;InbreedingCoeff=0.3862;MQ=35.23;MQ0=110;MQRankSum=1.911;QD=1.07;ReadPosRankSum=-0.637;VQSLOD=2.4509;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:40,0:33:11.71:15,0,12	./.	./.	./.	0/0:29,0:23:3.01:0,3,50	0/0:33,0:23:15.38:0,15,154	./.	./.	0/0:30,0:30:6.85:0,7,40	0/1:23,0:22:6.10:19,0,6	1/1:19,0:16:3.01:37,3,0	1/1:29,2:24:8.86:89,9,0	1/1:21,0:16:2.86:15,3,0	1/1:36,1:26:5.88:52,6,0	0/0:27,0:26:12.92:0,13,123	0/0:22,0:21:15.48:0,15,172	1/1:12,0:8:3.01:35,3,0	0/0:28,0:24:7.76:0,8,45	./.	0/0:16,0:16:17.58:0,18,137	0/0:15,0:14:3.15:0,3,13	1/1:27,1:17:8.99:94,9,0	0/0:31,0:23:11.32:0,11,88	0/0:26,0:16:5.42:0,5,50	0/0:33,0:29:31.15:0,31,241	0/1:26,1:26:41.95:66,0,42	0/1:22,0:21:0.38:0,0,203	./.
chr10	17785303	.	GA	G	2460.64	PASS	AB=0.806;AC=15;AF=0.268;AN=56;BaseQRankSum=15.003;DP=668;FS=3.094;HRun=2;HaplotypeScore=189.8658;InbreedingCoeff=-0.3700;MQ=35.27;MQ0=109;MQRankSum=-8.031;QD=6.31;ReadPosRankSum=2.312;VQSLOD=0.9917;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:31,8:32:99:176,0,214	0/1:9,4:12:94.32:94,0,102	0/0:5,0:3:9.03:0,9,125	0/0:11,0:5:15.05:0,15,208	0/1:22,6:23:99:107,0,231	0/0:33,0:23:66.16:0,66,868	0/0:25,0:17:42.02:0,42,549	0/0:29,0:24:62.66:0,63,845	0/1:27,4:31:99:141,0,471	0/1:16,6:21:99:197,0,258	0/1:13,5:15:99:130,0,104	0/1:26,6:25:99:180,0,222	0/1:15,8:16:22.75:302,0,23	0/1:28,9:26:99:294,0,139	0/0:27,0:26:54.12:0,54,677	0/0:22,0:21:57.13:0,57,736	0/1:7,5:8:21.92:149,0,22	0/0:28,0:24:66.78:0,67,823	0/0:20,0:18:36.13:0,36,422	0/0:16,0:16:44.96:0,45,574	0/0:14,1:14:26.81:0,27,250	0/1:22,7:17:89.60:212,0,90	0/1:23,8:23:99:209,0,228	0/1:24,2:16:41.35:41,0,164	0/0:34,0:30:75.51:0,76,926	0/1:18,9:26:99:259,0,233	0/1:18,4:21:99:126,0,404	0/0:13,0:8:15.04:0,15,179
chr10	17787112	.	GA	G	9435.78	PASS	AB=0.576;AC=42;AF=0.750;AN=56;BaseQRankSum=6.321;DP=617;FS=6.198;HRun=10;HaplotypeScore=65.7853;InbreedingCoeff=0.8353;MQ=70.79;MQ0=3;MQRankSum=-0.662;QD=19.50;ReadPosRankSum=7.181;VQSLOD=4.9528;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:4,43:47:88.08:984,88,0	0/1:4,7:11:12.19:135,0,12	0/0:27,0:17:18.65:0,19,338	0/0:20,0:7:15.43:0,15,129	1/1:2,15:18:41.01:344,41,0	1/1:1,22:23:59.99:521,60,0	1/1:4,23:27:53.96:468,54,0	0/0:29,0:29:69.17:0,69,748	1/1:0,13:13:29.99:260,30,0	1/1:2,24:27:73.95:618,74,0	0/1:2,11:13:0.22:227,0,0	1/1:2,14:16:12.48:263,12,0	1/1:2,8:10:17.70:156,18,0	1/1:1,20:21:38.99:339,39,0	1/1:2,19:21:50.99:443,51,0	1/1:1,19:20:50.82:442,51,0	1/1:4,32:37:92:783,92,0	1/1:3,33:36:89.98:781,90,0	0/0:18,0:17:39.11:0,39,432	0/0:15,1:16:10.01:0,10,308	0/0:23,0:23:57.11:0,57,605	1/1:5,13:18:35.98:312,36,0	1/1:2,10:12:23.99:208,24,0	1/1:4,20:24:53.94:462,54,0	1/1:5,19:24:30.08:365,30,0	1/1:4,18:22:53.89:459,54,0	1/1:5,28:34:82.88:709,83,0	1/1:3,7:10:17.98:156,18,0
chr10	17788248	.	C	CG	9277.26	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-0.828;DP=701;FS=1.342;HRun=0;HaplotypeScore=88.3131;InbreedingCoeff=0.9983;MQ=85.39;MQ0=0;MQRankSum=-2.740;QD=44.60;ReadPosRankSum=3.455;VQSLOD=5.0786;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,38:38:99:1724,108,0	0/0:9,0:9:27.09:0,27,378	0/0:24,0:24:66.70:0,67,808	0/0:21,0:21:53.31:0,53,629	0/0:24,0:24:69.22:0,69,942	0/0:19,0:19:57.19:0,57,797	0/0:27,0:27:81.23:0,81,1110	0/0:32,0:32:90.28:0,90,1213	0/0:17,0:17:51.17:0,51,699	0/0:28,0:28:84.27:0,84,1158	0/0:12,0:12:30.05:0,30,420	1/1:0,34:34:99:1581,99,0	1/1:0,28:28:81.28:1277,81,0	1/1:0,20:20:60.20:959,60,0	0/0:23,0:23:69.22:0,69,949	0/0:24,0:24:72.24:0,72,1004	0/0:24,0:24:72.24:0,72,1007	0/0:34,0:34:99:0,102,1406	0/0:20,0:20:60.15:0,60,787	0/0:23,0:23:69.23:0,69,965	0/0:38,0:38:99:0,114,1594	1/1:1,26:27:69.24:1102,69,0	1/1:1,18:19:48.16:767,48,0	1/1:1,41:42:99:1868,117,0	0/0:23,0:23:69.22:0,69,945	0/0:33,0:33:99:0,99,1347	0/0:32,0:32:93.30:0,93,1284	0/0:6,0:6:18.06:0,18,252
chr10	17788831	.	AG	A	1491.92	PASS	AB=0.930;AC=27;AF=0.482;AN=56;BaseQRankSum=-0.182;DP=427;FS=2.205;HRun=2;HaplotypeScore=74.7690;InbreedingCoeff=0.6582;MQ=73.35;MQ0=0;MQRankSum=-1.293;QD=6.51;ReadPosRankSum=0.055;VQSLOD=0.7031;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:20,4:24:67.62:68,0,150	1/1:4,2:6:5.99:49,6,0	0/0:13,0:10:7.96:0,8,183	0/0:11,0:9:4.97:0,5,138	1/1:5,0:5:8.90:72,9,0	0/0:8,0:8:23.64:0,24,153	0/0:28,0:28:76.64:0,77,508	1/1:9,8:17:14.89:110,15,0	0/1:13,1:14:1.28:1,0,144	1/1:6,11:17:32.14:250,32,0	1/1:3,4:7:5.99:49,6,0	0/0:22,1:23:21.60:0,22,378	0/0:13,0:13:2.58:0,3,149	0/0:12,0:12:17.92:0,18,150	0/0:20,0:20:58.73:0,59,372	0/0:14,0:14:35.21:0,35,236	1/1:29,0:29:6.66:22,7,0	0/0:24,0:24:56.17:0,56,351	1/1:7,3:10:8.98:73,9,0	1/1:7,3:10:5.20:32,5,0	1/1:19,20:39:63.43:470,63,0	0/0:8,0:8:11.87:0,12,96	0/0:5,0:5:2.96:0,3,23	0/1:13,0:13:11.37:11,0,136	0/0:19,0:19:48.21:0,48,344	1/1:8,3:11:16.40:109,16,0	1/1:7,12:19:31.38:246,31,0	1/1:3,5:8:17.66:132,18,0
chr10	17788832	.	GGC	G	584.22	PASS	AB=0.963;AC=18;AF=0.321;AN=56;BaseQRankSum=6.572;DP=433;FS=6.837;HRun=0;HaplotypeScore=84.8678;InbreedingCoeff=-0.0988;MQ=71.35;MQ0=0;MQRankSum=-2.366;QD=2.15;ReadPosRankSum=5.960;VQSLOD=0.5194;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:41.10:0,41,428	1/1:6,0:6:0.96:2,1,0	0/0:13,0:10:2.58:0,3,209	0/0:10,0:8:14.96:0,15,184	0/0:6,0:6:4.59:0,5,11	0/1:8,0:8:6.48:26,0,6	0/1:30,0:30:68.18:77,0,68	0/1:17,0:17:15.30:27,0,15	0/0:15,0:15:32.03:0,32,353	0/1:16,1:17:21.90:28,0,22	0/0:7,0:7:3.92:0,4,11	0/0:23,0:23:50.95:0,51,674	0/0:15,0:15:35.69:0,36,374	0/0:12,0:12:26.98:0,27,298	0/1:20,0:20:6.82:78,0,7	0/1:16,0:16:35.60:36,0,51	1/1:26,3:29:9.02:96,9,0	0/1:23,0:23:12.45:84,0,12	0/0:10,0:10:3.88:0,4,24	0/1:9,1:10:16.05:24,0,16	0/1:35,4:39:29.90:81,0,30	0/0:8,0:8:14.97:0,15,172	0/0:5,0:5:3:0,3,39	0/0:13,0:13:30.95:0,31,328	0/1:19,0:19:50.70:51,0,100	1/1:9,2:11:4.09:62,4,0	0/1:17,2:19:26.48:51,0,26	0/1:7,1:8:17.30:17,0,49
chr10	17788833	.	GCC	G	2773.98	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=-9.965;DP=429;FS=0.000;HRun=11;HaplotypeScore=76.7307;InbreedingCoeff=0.4207;MQ=70.45;MQ0=0;MQRankSum=-2.340;QD=10.55;ReadPosRankSum=6.266;VQSLOD=1.1465;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:51.98:0,52,524	0/0:6,0:6:4.99:0,5,18	0/0:11,0:9:9.66:0,10,106	0/0:10,0:8:14.71:0,15,132	0/0:0,0:6:7.41:0,7,27	1/1:1,7:8:21.05:224,21,0	1/1:5,25:30:63.12:671,63,0	0/1:16,0:16:12.87:13,0,68	0/0:15,0:15:35.55:0,36,429	0/1:17,0:17:0.87:1,0,90	0/0:6,0:7:5.88:0,6,19	0/0:23,0:23:56.65:0,57,795	0/0:13,0:15:35.44:0,35,446	0/0:11,0:11:27.52:0,28,350	1/1:2,18:20:54.13:575,54,0	1/1:3,13:16:27.04:287,27,0	1/1:5,0:28:9:96,9,0	1/1:1,21:23:48.01:566,48,0	0/0:10,0:10:10.47:0,10,49	0/1:10,0:10:16.49:24,0,16	0/1:39,0:39:36.91:37,0,140	0/0:8,0:8:15.04:0,15,209	0/0:5,0:5:3.01:0,3,45	0/0:14,0:14:38.97:0,39,456	1/1:6,13:19:36.06:383,36,0	0/1:10,0:10:21.56:48,0,22	0/1:19,0:19:31.99:32,0,76	0/1:8,0:8:10.35:10,0,89
chr10	17789059	.	A	AGTGTGT	2481.59	PASS	AB=1.000;AC=27;AF=0.643;AN=42;BaseQRankSum=-2.942;DP=663;FS=11.939;HRun=0;HaplotypeScore=152.0088;InbreedingCoeff=0.5025;MQ=70.13;MQ0=17;MQRankSum=0.549;QD=7.75;ReadPosRankSum=-1.421;VQSLOD=1.4205;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	1/1:11,0:11:3.01:41,3,0	./.	./.	1/1:18,0:18:0.47:1,0,0	1/1:27,0:25:1.83:3,2,0	0/1:38,0:37:39.84:250,0,40	0/0:24,0:24:2.90:0,3,19	0/0:25,0:26:6.02:0,6,102	1/1:16,0:16:6.84:44,7,0	0/1:8,0:7:0:0,0,0	0/0:25,0:27:6.02:0,6,84	0/0:18,0:19:3.01:0,3,42	0/0:30,0:33:9.03:0,9,126	1/1:19,0:19:24.96:297,25,0	1/1:16,4:27:6:115,6,0	1/1:33,0:34:29.06:339,29,0	1/1:37,0:36:57.16:987,57,0	./.	./.	./.	0/1:14,0:13:0:0,0,0	./.	0/0:25,0:27:6.02:0,6,84	1/1:20,0:19:3.01:56,3,0	1/1:17,0:16:15.57:152,16,0	1/1:10,0:14:5.03:101,5,0	1/1:18,0:18:18.03:230,18,0
chr10	17789385	.	CAT	C	2979.89	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=10.159;DP=643;FS=6.636;HRun=0;HaplotypeScore=73.8897;InbreedingCoeff=0.9996;MQ=84.66;MQ0=1;MQRankSum=-1.438;QD=33.86;ReadPosRankSum=-2.911;VQSLOD=4.9197;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,129,2314	0/0:12,0:12:33.09:0,33,596	0/0:23,0:23:63.14:0,63,1078	0/0:20,0:20:42.35:0,42,1056	0/0:20,0:20:57.13:0,57,962	0/0:21,0:21:60.17:0,60,1036	0/0:34,0:34:99:0,102,1763	1/1:3,29:32:83.90:1124,84,0	0/0:16,0:16:48.15:0,48,887	0/0:33,0:33:96.30:0,96,1775	0/0:16,0:16:48.04:0,48,824	0/0:31,0:31:90.29:0,90,1685	0/0:18,0:18:54.17:0,54,979	0/0:25,0:25:75.15:0,75,1321	0/0:27,0:26:78.22:0,78,1396	0/0:29,0:29:87.27:0,87,1585	0/0:29,0:29:87.30:0,87,1644	0/0:16,0:16:45.11:0,45,775	1/1:0,17:17:51.13:734,51,0	1/1:0,10:10:27.09:413,27,0	1/1:0,29:28:57.19:869,57,0	0/0:18,0:18:45.15:0,45,840	0/0:12,0:12:36.12:0,36,676	0/0:22,0:22:66.19:0,66,1203	0/0:25,0:25:75.26:0,75,1438	0/0:26,0:26:78.25:0,78,1431	0/0:23,0:23:69.20:0,69,1241	0/0:14,0:14:42.11:0,42,721
chr10	17791095	.	G	GTATC	514.67	PASS	AC=6;AF=0.130;AN=46;BaseQRankSum=-0.586;DP=606;FS=10.346;HRun=0;HaplotypeScore=112.8061;InbreedingCoeff=0.8647;MQ=46.44;MQ0=32;MQRankSum=1.420;QD=8.17;ReadPosRankSum=1.160;VQSLOD=1.8045;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:57.19:0,57,948	0/0:19,0:16:24.05:0,24,332	./.	./.	0/0:19,0:13:15.03:0,15,223	1/1:3,19:21:3.01:51,3,0	1/1:17,0:11:21.03:385,21,0	0/0:51,0:38:84.12:0,84,1171	0/0:29,0:26:33.08:0,33,468	0/0:35,0:27:59.89:0,60,820	0/0:17,0:16:6.02:0,6,101	0/0:26,0:25:30.10:0,30,508	0/0:21,0:20:18.06:0,18,304	0/0:27,0:24:36.11:0,36,565	./.	./.	0/0:16,0:15:27.01:0,27,337	1/1:3,18:21:12.04:202,12,0	0/0:17,0:13:27.09:0,27,429	0/0:20,0:18:45.09:0,45,688	0/0:21,0:21:41.50:0,42,636	0/0:21,0:20:21.07:0,21,348	0/0:21,0:20:33.10:0,33,516	0/0:10,0:10:18.06:0,18,308	./.	0/0:24,0:19:47.24:0,47,639	0/0:19,0:18:17.92:0,18,212	0/0:13,0:11:33.06:0,33,481
chr10	17791119	.	GTATC	G	3759.60	PASS	AB=0.967;AC=36;AF=0.720;AN=50;BaseQRankSum=-4.715;DP=584;FS=6.384;HRun=0;HaplotypeScore=90.2895;InbreedingCoeff=0.2394;MQ=41.75;MQ0=56;MQRankSum=1.139;QD=8.17;ReadPosRankSum=4.474;VQSLOD=1.5045;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:16,4:20:17.29:344,17,0	1/1:9,6:10:3.01:43,3,0	0/0:6,0:2:5.23:0,5,62	./.	./.	1/1:22,0:19:2.99:24,3,0	0/0:22,0:14:12.36:0,12,48	0/1:43,0:28:6.80:7,0,405	1/1:4,22:18:6.02:93,6,0	0/1:24,8:23:4.76:590,0,5	1/1:11,9:16:3.01:47,3,0	1/1:4,19:21:18.06:298,18,0	1/1:4,20:23:9.03:144,9,0	1/1:4,20:19:12.04:198,12,0	./.	0/0:19,0:17:2.04:0,2,6	1/1:11,0:11:9.02:126,9,0	0/1:21,0:20:5.46:57,0,5	0/1:16,0:12:29.75:131,0,30	0/1:31,0:20:13.83:193,0,14	0/1:21,0:20:59.77:92,0,60	1/1:4,21:22:12.04:193,12,0	1/1:2,20:20:21.07:349,21,0	1/1:6,6:10:3.01:52,3,0	0/0:34,0:34:19.30:0,19,103	1/1:13,9:17:26.96:382,27,0	1/1:16,6:20:14.80:172,15,0	1/1:7,1:7:21:224,21,0
chr10	17791135	.	GTATC	G	506.10	PASS	AB=0.947;AC=24;AF=0.500;AN=48;BaseQRankSum=-1.851;DP=551;FS=3.928;HRun=0;HaplotypeScore=91.7387;InbreedingCoeff=0.3777;MQ=37.86;MQ0=61;MQRankSum=-0.801;QD=1.90;ReadPosRankSum=0.827;VQSLOD=1.2958;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:16,0:16:1.51:2,0,18	1/1:10,6:9:3.01:38,3,0	0/0:13,0:5:12.44:0,12,195	0/0:7,0:1:2.84:0,3,14	./.	./.	0/1:20,0:10:17.46:33,0,17	1/1:26,0:14:2.93:38,3,0	0/0:22,0:13:2.90:0,3,16	0/1:22,8:20:6.22:192,0,6	./.	1/1:23,0:21:2.04:6,2,0	1/1:23,0:22:1.25:3,1,0	0/1:24,0:19:0.93:1,0,10	./.	0/0:17,0:14:2.04:0,2,6	1/1:10,0:9:2.88:16,3,0	0/0:17,0:16:9.18:0,9,33	0/0:16,0:12:12.14:0,12,66	0/0:28,0:17:17.33:0,17,69	0/0:18,0:17:21.71:0,22,112	0/0:28,0:23:4.43:0,4,33	1/1:24,0:21:3.03:9,3,0	1/1:10,0:8:1.25:3,1,0	0/0:34,0:33:10.67:0,11,31	1/1:12,8:14:20.36:226,20,0	1/1:16,6:20:2.68:19,3,0	1/1:3,0:3:5.85:61,6,0
chr10	17791143	.	CTA	C	105.24	PASS	AB=0.806;AC=3;AF=0.058;AN=52;BaseQRankSum=4.171;DP=548;FS=6.802;HRun=0;HaplotypeScore=89.6283;InbreedingCoeff=-0.1107;MQ=36.98;MQ0=68;MQRankSum=-4.511;QD=1.95;ReadPosRankSum=1.460;VQSLOD=0.9560;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:15.05:0,15,219	0/0:15,1:9:3:0,3,28	0/0:17,0:6:18.06:0,18,330	0/0:11,0:3:9.03:0,9,135	./.	0/0:18,0:15:2.73:0,3,33	0/0:19,0:9:19.22:0,19,235	0/0:24,0:16:43.55:0,44,508	0/0:21,0:12:12.43:0,12,152	0/1:28,3:20:99:157,0,218	./.	0/0:21,0:19:18.06:0,18,250	0/0:19,0:18:9.03:0,9,125	0/0:27,0:22:26.96:0,27,326	0/0:21,0:19:6.02:0,6,82	0/0:19,0:16:6.02:0,6,90	0/0:9,0:8:5.93:0,6,66	0/0:17,0:16:22.32:0,22,336	0/0:16,0:12:30.56:0,31,464	0/0:31,0:16:24.08:0,24,395	0/0:16,0:15:27.09:0,27,452	0/0:31,0:26:21.06:0,21,287	0/0:24,0:21:21.07:0,21,291	0/0:9,0:7:3.01:0,3,40	0/0:29,0:28:24.40:0,24,371	0/0:18,2:14:5.18:0,5,187	0/1:12,6:16:28.28:28,0,37	0/1:2,1:3:16.61:17,0,73
chr10	17791151	.	C	CTG	191.33	PASS	AB=0.958;AC=12;AF=0.231;AN=52;BaseQRankSum=1.039;DP=582;FS=0.000;HRun=0;HaplotypeScore=95.4477;InbreedingCoeff=-0.0952;MQ=35.64;MQ0=78;MQRankSum=0.676;QD=0.82;ReadPosRankSum=-2.458;VQSLOD=1.2956;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:14.12:0,14,135	1/1:12,4:9:3:29,3,0	0/0:24,0:9:24.05:0,24,335	0/0:18,0:4:9.03:0,9,138	./.	0/0:18,0:15:3.01:0,3,46	0/0:19,0:10:18.53:0,19,253	0/1:26,1:20:39.52:40,0,513	0/1:20,0:11:10.06:36,0,10	0/1:29,4:18:85.51:86,0,152	./.	0/1:21,0:19:6.77:7,0,164	0/0:17,0:16:6.08:0,6,57	0/1:28,0:23:52.48:52,0,88	0/0:23,0:21:12.03:0,12,162	0/0:21,0:18:6.02:0,6,92	0/1:8,1:8:1.99:2,0,40	0/0:17,0:16:21.01:0,21,247	0/0:18,0:13:35.36:0,35,414	0/0:26,4:16:24.01:0,24,350	0/1:18,0:15:3.45:3,0,300	0/1:31,0:25:12.01:12,0,91	0/0:24,0:20:21.54:0,22,300	0/0:8,0:6:3.01:0,3,46	0/0:25,1:25:26.95:0,27,371	0/1:18,5:16:52.17:52,0,195	0/0:19,1:17:3.34:0,3,46	0/1:6,0:6:2.01:3,0,2
chr10	17791155	.	C	CTG	1026.91	PASS	AB=0.960;AC=15;AF=0.288;AN=52;BaseQRankSum=0.103;DP=586;FS=9.745;HRun=0;HaplotypeScore=92.5530;InbreedingCoeff=0.0447;MQ=35.75;MQ0=80;MQRankSum=0.114;QD=4.31;ReadPosRankSum=-1.952;VQSLOD=1.5447;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:14,1:15:45.89:46,0,79	1/1:14,2:9:3.01:52,3,0	0/0:24,0:9:26.62:0,27,341	0/0:20,0:4:12.04:0,12,180	./.	0/0:19,0:16:2.22:0,2,7	0/0:18,1:10:18.51:0,19,239	0/0:29,0:24:61.88:0,62,740	1/1:17,2:10:7.27:152,7,0	0/1:33,0:18:63.02:72,0,63	./.	0/1:20,0:18:37.58:38,0,127	0/1:19,0:18:33.64:129,0,34	0/1:28,2:24:50:384,0,50	0/0:23,1:22:11.24:0,11,36	0/0:21,1:19:5.05:0,5,52	0/1:7,1:7:7.36:7,0,40	0/0:17,0:16:21.03:0,21,250	0/0:19,0:14:31.91:0,32,470	0/0:33,0:16:23.97:0,24,339	0/0:18,0:15:27.51:0,28,381	0/1:25,4:23:39.45:138,0,39	0/0:20,3:18:20.10:0,20,198	0/0:8,0:6:3.01:0,3,45	0/0:25,0:24:26.35:0,26,368	0/1:23,0:16:77.47:82,0,77	0/1:20,0:17:10.62:11,0,39	1/1:6,0:6:11.69:69,12,0
chr10	17791161	.	ATC	A	1378.16	PASS	AB=0.940;AC=21;AF=0.420;AN=50;BaseQRankSum=1.514;DP=581;FS=28.643;HRun=0;HaplotypeScore=80.7683;InbreedingCoeff=-0.0089;MQ=34.45;MQ0=87;MQRankSum=-0.651;QD=4.45;ReadPosRankSum=-0.666;VQSLOD=0.3440;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:14,1:14:27.07:27,0,77	./.	0/0:38,0:12:30.10:0,30,512	0/0:22,0:5:11.85:0,12,192	./.	0/1:19,0:16:13.12:21,0,13	0/0:16,3:10:18.01:0,18,246	0/1:28,3:24:66.24:66,0,799	1/1:16,2:8:8.84:119,9,0	1/1:17,13:15:22.26:260,22,0	./.	0/1:17,0:15:29.28:29,0,117	0/1:18,0:17:30.41:115,0,30	0/1:26,3:23:56.03:290,0,56	0/0:21,1:19:14.64:0,15,96	0/1:22,1:20:11.12:11,0,59	1/1:3,2:4:1.25:3,1,0	0/1:14,0:14:64.78:65,0,140	0/1:19,0:13:81.63:82,0,263	0/0:20,11:14:21.06:0,21,323	0/0:16,2:15:26.75:0,27,365	0/1:23,4:21:30.83:105,0,31	0/0:20,4:19:14.75:0,15,197	0/0:8,0:6:3.01:0,3,42	0/0:23,0:22:27.52:0,28,360	0/1:15,7:15:56.92:150,0,57	1/1:9,10:16:4.12:40,4,0	1/1:0,4:4:12.04:157,12,0
chr10	17791163	.	C	CTA	1278.56	PASS	AB=0.954;AC=21;AF=0.420;AN=50;BaseQRankSum=0.300;DP=596;FS=26.192;HRun=0;HaplotypeScore=86.6983;InbreedingCoeff=-0.0563;MQ=34.07;MQ0=91;MQRankSum=-0.059;QD=3.98;ReadPosRankSum=-2.191;VQSLOD=-0.1432;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:11,0:14:30.89:31,0,79	./.	0/0:39,0:13:33.08:0,33,495	0/0:24,0:5:12.02:0,12,183	./.	1/1:19,0:16:0.95:3,1,0	0/0:19,0:10:10.92:0,11,170	0/1:32,0:24:65.19:65,0,815	1/1:18,0:8:8.98:120,9,0	0/1:26,4:16:6.74:191,0,7	./.	0/1:15,0:13:29.29:29,0,124	0/1:19,0:18:33.36:115,0,33	0/1:32,0:26:60.70:292,0,61	0/0:21,2:20:2.76:0,3,6	0/1:24,0:21:12.50:12,0,40	1/1:4,2:4:1.24:3,1,0	0/1:14,1:14:84.80:85,0,122	0/1:16,5:15:56.38:56,0,339	0/0:27,5:14:21:0,21,316	0/0:15,0:15:27.54:0,28,370	0/1:27,0:21:33.41:98,0,33	0/0:23,0:18:14.24:0,14,190	0/0:8,0:6:3.01:0,3,45	0/0:23,0:23:24.56:0,25,250	0/1:19,4:16:71.96:164,0,72	1/1:18,1:16:4.23:26,4,0	1/1:4,0:4:11.87:141,12,0
chr10	17791197	.	GTATC	G	276.06	PASS	AB=0.976;AC=14;AF=0.269;AN=52;BaseQRankSum=-2.544;DP=580;FS=0.000;HRun=0;HaplotypeScore=96.0693;InbreedingCoeff=0.1065;MQ=30.46;MQ0=133;MQRankSum=2.816;QD=1.21;ReadPosRankSum=0.238;VQSLOD=1.6914;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:11,0:10:7.10:35,0,7	0/0:9,0:4:4.07:0,4,12	0/0:32,0:7:13.46:0,13,189	0/0:31,0:5:3.97:0,4,82	./.	0/1:20,0:15:1.99:3,0,2	1/1:15,0:5:3.01:39,3,0	1/1:23,0:13:5.16:72,5,0	0/0:22,0:14:14.50:0,15,78	0/1:29,0:17:6.42:6,0,288	0/0:32,0:21:3.01:0,3,54	0/0:13,0:12:17.93:0,18,150	0/0:19,0:19:9.03:0,9,157	0/0:24,0:21:29.33:0,29,261	0/1:19,3:18:10.08:19,0,10	0/1:23,2:20:15.77:16,0,24	0/0:7,0:5:4.25:0,4,55	0/0:14,0:8:2.96:0,3,19	0/0:18,0:8:14.68:0,15,204	0/0:37,0:20:8.62:0,9,97	1/1:11,0:9:3.46:25,3,0	0/0:26,0:21:11.66:0,12,116	0/1:22,0:18:13.99:18,0,14	./.	0/1:25,0:20:10.61:178,0,11	0/1:25,0:21:3.19:3,0,323	0/0:24,0:21:5.05:0,5,63	0/0:10,0:7:9.50:0,9,140
chr10	17791201	.	C	CTATG	1485.95	PASS	AB=1.000;AC=28;AF=0.560;AN=50;BaseQRankSum=-0.478;DP=558;FS=9.802;HRun=0;HaplotypeScore=86.8819;InbreedingCoeff=0.1714;MQ=29.46;MQ0=141;MQRankSum=4.742;QD=4.52;ReadPosRankSum=1.380;VQSLOD=1.1402;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:11,0:10:15.45:80,0,15	./.	0/0:35,0:5:12.79:0,13,178	0/0:29,0:4:3.97:0,4,93	./.	1/1:13,8:16:6.02:162,6,0	1/1:13,1:5:3.01:39,3,0	1/1:17,0:7:2.49:49,2,0	1/1:19,0:14:11.85:80,12,0	0/1:29,0:16:49.14:49,0,136	0/0:28,0:17:3.01:0,3,48	0/1:12,0:11:11.87:12,0,77	1/1:18,0:18:8.70:48,9,0	1/1:21,0:19:24.82:167,25,0	1/1:23,1:20:4.18:389,4,0	1/1:23,2:20:4.37:193,4,0	0/0:7,0:5:0.88:0,1,48	1/1:12,1:7:0.47:1,0,0	0/0:15,1:6:14.59:0,15,153	0/0:36,0:19:8.19:0,8,49	1/1:10,0:8:0.43:20,0,0	0/1:26,0:21:29.25:29,0,40	0/1:22,0:18:13.99:18,0,14	./.	1/1:22,1:18:10.14:264,10,0	0/1:24,0:19:39.97:40,0,128	0/0:25,0:21:2.86:0,3,49	0/0:11,0:7:3.38:0,3,37
chr10	17791209	.	G	GTATC	2333.25	PASS	AB=0.982;AC=40;AF=0.833;AN=48;BaseQRankSum=0.953;DP=529;FS=15.519;HRun=0;HaplotypeScore=77.6572;InbreedingCoeff=0.2832;MQ=28.47;MQ0=153;MQRankSum=0.525;QD=5.53;ReadPosRankSum=0.514;VQSLOD=0.5926;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:9:7.33:48,7,0	./.	0/0:36,0:3:2.96:0,3,19	0/0:34,0:3:8.87:0,9,60	0/1:24,2:17:0:0,0,0	1/1:20,0:15:5.99:50,6,0	./.	0/1:13,0:1:0:0,0,0	1/1:18,0:14:12:111,12,0	1/1:21,3:11:26.91:391,27,0	1/1:23,1:13:3:25,3,0	1/1:12,0:10:6.55:34,7,0	1/1:20,0:19:14.92:115,15,0	1/1:21,0:18:28.70:277,29,0	1/1:24,0:20:8.89:114,9,0	0/1:25,0:19:6.53:41,0,7	1/1:6,1:4:3.01:77,3,0	1/1:14,0:8:5.93:40,6,0	0/1:11,0:3:15.99:23,0,16	1/1:30,0:19:4.35:56,4,0	./.	1/1:24,0:21:11.90:95,12,0	1/1:22,0:19:0.94:3,1,0	./.	1/1:20,0:14:0.68:22,1,0	1/1:21,5:20:47.22:776,47,0	1/1:9,11:17:2.94:18,3,0	1/1:5,5:6:11.86:133,12,0
chr10	17791342	.	T	TAAA	6465.15	PASS	AC=30;AF=0.882;AN=34;BaseQRankSum=-3.153;DP=363;FS=28.531;HRun=0;HaplotypeScore=22.9511;InbreedingCoeff=0.5352;MQ=29.14;MQ0=224;MQRankSum=-3.380;QD=28.61;ReadPosRankSum=1.865;VQSLOD=2.8622;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	1/1:0,14:10:30.10:737,30,0	0/0:7,0:3:6.02:0,6,87	0/0:15,0:2:6.02:0,6,112	1/1:1,14:8:18.06:405,18,0	1/1:0,12:4:6.02:147,6,0	./.	./.	1/1:2,18:2:3.01:74,3,0	1/1:1,17:10:30.08:686,30,0	1/1:0,14:12:33.11:807,33,0	./.	./.	./.	./.	1/1:0,13:6:6.02:147,6,0	1/1:2,10:1:3.01:72,3,0	./.	./.	1/1:0,12:9:27.09:664,27,0	./.	1/1:1,13:8:24.08:587,24,0	1/1:2,15:8:15.05:368,15,0	./.	1/1:3,25:19:45:1106,45,0	1/1:1,12:7:18.06:443,18,0	1/1:3,15:3:6.02:148,6,0	1/1:0,2:1:3.01:74,3,0
chr10	17794134	.	A	ATT	2469.50	PASS	AB=0.734;AC=26;AF=0.464;AN=56;BaseQRankSum=9.841;DP=593;FS=11.695;HRun=13;HaplotypeScore=93.3438;InbreedingCoeff=0.5605;MQ=76.74;MQ0=1;MQRankSum=-0.322;QD=6.96;ReadPosRankSum=-0.897;VQSLOD=-0.1979;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:40:3.81:135,4,0	0/0:8,0:8:24:0,24,211	0/0:26,0:25:25.93:0,26,163	0/1:28,0:22:8.18:12,0,8	0/0:29,0:31:59.32:0,59,550	1/1:6,2:24:51.09:520,51,0	1/1:9,2:20:15.49:144,15,0	0/0:27,0:27:35.38:0,35,472	1/1:2,9:14:23.56:281,24,0	0/0:16,0:18:35.33:0,35,285	0/0:12,0:13:17.77:0,18,203	0/1:5,0:17:5.32:59,0,5	0/1:5,0:16:9.42:9,0,14	0/1:8,2:24:15.34:137,0,15	1/1:9,1:15:12.02:131,12,0	1/1:6,0:16:21.03:203,21,0	0/0:32,0:35:80.19:0,80,728	1/1:15,0:35:36.05:351,36,0	0/0:14,0:15:17.37:0,17,185	0/1:21,0:21:7.76:8,0,224	0/0:11,0:12:23.33:0,23,182	1/1:2,0:16:32.44:112,32,0	0/1:12,1:25:38.98:137,0,39	1/1:5,0:23:3.73:68,4,0	1/1:8,1:20:36.06:366,36,0	0/0:14,0:14:23.84:0,24,211	0/0:18,0:24:23.59:0,24,255	0/0:11,0:12:11.71:0,12,150
chr10	17794674	.	A	AT	33.29	PASS	AB=0.687;AC=8;AF=0.190;AN=42;BaseQRankSum=1.657;DP=68;FS=38.706;HRun=0;HaplotypeScore=23.6339;InbreedingCoeff=0.0577;MQ=112.71;MQ0=1;MQRankSum=-1.955;QD=3.03;ReadPosRankSum=1.000;VQSLOD=1.4004;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:1,1:2:3.48:0,3,43	0/0:1,0:1:2.80:0,3,13	0/0:20,0:12:26.95:0,27,285	0/0:16,0:9:5.24:0,5,67	./.	0/0:1,0:1:3:0,3,26	./.	0/0:2,0:2:4.83:0,5,47	0/1:1,1:2:35.87:41,0,36	0/1:1,1:2:3.28:3,0,21	0/0:1,0:1:3.01:0,3,40	0/0:2,0:2:6.01:0,6,68	0/0:2,0:2:6.01:0,6,69	0/1:1,1:2:13.95:36,0,14	./.	1/1:1,0:1:3.01:36,3,0	0/0:2,0:2:4.82:0,5,31	1/1:0,1:1:1.25:3,1,0	./.	0/1:2,1:3:9.92:16,0,10	./.	0/0:1,0:1:3:0,3,26	./.	0/0:2,0:2:0:0,0,0	0/0:1,0:1:0.47:0,0,1	0/0:2,0:2:1.55:0,2,4	0/0:1,0:1:3.01:0,3,42	./.
chr10	17794935	.	ATC	A	567.33	PASS	AB=0.934;AC=20;AF=0.400;AN=50;BaseQRankSum=-1.132;DP=478;FS=18.034;HRun=0;HaplotypeScore=83.7392;InbreedingCoeff=0.3719;MQ=77.68;MQ0=16;MQRankSum=0.105;QD=3.40;ReadPosRankSum=0.076;VQSLOD=0.5749;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:10.07:0,10,375	0/1:4,3:7:7.21:27,0,7	./.	./.	1/1:17,1:18:14.76:128,15,0	0/0:17,0:18:1.90:0,2,22	0/0:21,0:22:7.99:0,8,78	0/0:20,0:20:2.98:0,3,21	0/0:13,0:13:20.77:0,21,185	0/1:17,0:18:5.09:80,0,5	0/0:11,0:11:2.85:0,3,17	0/1:12,0:12:23.42:23,0,39	0/1:7,0:6:14.06:14,0,103	0/1:5,0:5:0:0,0,0	0/0:6,0:7:12.02:0,12,137	0/0:11,0:11:18.05:0,18,226	1/1:16,1:18:11.67:91,12,0	0/1:14,1:22:11.20:11,0,116	0/0:11,0:10:1.55:0,2,4	1/1:14,0:15:2.84:14,3,0	./.	0/0:13,0:13:14.88:0,15,142	0/0:12,0:12:8.96:0,9,73	0/0:17,0:17:12.02:0,12,117	1/1:6,1:7:3.89:34,4,0	1/1:14,4:19:17.20:129,17,0	1/1:9,1:9:8.86:79,9,0	1/1:4,4:8:9.02:97,9,0
chr10	17794980	.	T	TCC	1782.71	PASS	AB=0.902;AC=16;AF=0.286;AN=56;BaseQRankSum=0.439;DP=475;FS=3.876;HRun=3;HaplotypeScore=70.6069;InbreedingCoeff=0.6246;MQ=69.45;MQ0=27;MQRankSum=0.607;QD=10.74;ReadPosRankSum=0.738;VQSLOD=0.4967;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:33,0:33:62.45:649,62,0	0/0:5,0:5:5.90:0,6,43	0/0:42,0:17:36.66:0,37,357	0/0:45,0:24:40:0,40,390	0/0:11,0:12:29.59:0,30,217	0/0:10,0:8:17.97:0,18,148	0/1:17,0:17:5.73:6,0,207	0/0:23,0:22:53.88:0,54,479	1/1:1,16:18:2.48:292,2,0	0/0:15,0:14:35.72:0,36,282	0/0:12,0:12:20.89:0,21,175	1/1:8,1:9:26.81:240,27,0	1/1:12,0:11:24.27:216,24,0	1/1:12,0:12:26.75:226,27,0	0/0:16,0:15:17.68:0,18,251	0/0:18,0:18:20.32:0,20,240	0/0:15,0:20:44.41:0,44,332	0/1:19,0:19:21.85:22,0,165	0/0:11,0:9:23.64:0,24,200	0/0:4,0:4:9:0,9,77	0/0:29,0:26:48.38:0,48,393	0/1:10,0:10:1.04:111,0,1	0/1:5,7:12:11.19:47,0,11	1/1:2,20:22:4.65:156,5,0	0/0:10,0:10:14.76:0,15,130	0/0:11,0:12:35.68:0,36,286	0/0:11,0:11:29.53:0,30,236	0/0:13,0:13:32.90:0,33,263
chr10	17795210	.	AGATCT	A	12101.11	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=6.586;DP=593;FS=13.066;HRun=0;HaplotypeScore=134.6131;InbreedingCoeff=0.9971;MQ=83.97;MQ0=0;MQRankSum=-12.581;QD=53.08;ReadPosRankSum=-0.470;VQSLOD=4.7266;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:81.24:0,81,2359	1/1:1,10:11:24.08:511,24,0	0/0:19,0:19:54.17:0,54,1462	0/0:22,0:22:57.16:0,57,1478	1/1:0,29:29:75.26:1579,75,0	0/0:29,0:29:84.29:0,84,2609	0/0:33,0:33:96.32:0,96,2896	1/1:5,34:39:99:2098,102,0	0/0:24,0:24:69.24:0,69,2140	1/1:1,20:21:60.19:1200,60,0	1/1:0,14:14:27.09:574,27,0	0/0:15,0:15:45.15:0,45,1410	0/0:19,0:19:57.20:0,57,1784	0/0:22,0:22:66.23:0,66,2064	0/0:20,0:20:57.16:0,57,1625	0/0:27,0:27:75.26:0,75,2337	1/1:0,11:11:30.10:638,30,0	0/0:16,0:16:48.16:0,48,1480	1/1:2,19:21:57.17:1154,57,0	1/1:1,13:14:27.09:574,27,0	1/1:3,15:18:36.12:749,36,0	0/0:23,0:23:69.24:0,69,2083	0/0:23,0:23:66.23:0,66,2045	0/0:31,0:31:90.29:0,90,2670	0/0:13,0:13:36.12:0,36,1054	1/1:0,24:24:72.24:1491,72,0	1/1:0,20:20:57.20:1213,57,0	1/1:1,5:6:15.05:319,15,0
chr10	17797036	.	AC	A	8431.70	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=13.032;DP=613;FS=4.121;HRun=7;HaplotypeScore=76.4898;InbreedingCoeff=0.9997;MQ=85.53;MQ0=0;MQRankSum=-3.809;QD=26.68;ReadPosRankSum=4.438;VQSLOD=5.5405;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,114,1420	1/1:2,9:11:27.06:275,27,0	0/0:31,0:31:81.22:0,81,989	0/0:20,0:20:37.08:0,37,452	1/1:0,12:12:30.07:306,30,0	1/1:0,24:24:66.15:673,66,0	1/1:3,24:27:63.14:643,63,0	0/0:22,0:22:51.15:0,51,626	1/1:1,25:26:60.14:612,60,0	1/1:3,28:31:87.17:875,87,0	1/1:0,12:12:33.07:336,33,0	0/0:19,0:19:48.15:0,48,603	0/0:23,0:23:66.21:0,66,823	0/0:21,0:21:63.20:0,63,787	1/1:3,26:28:78.18:796,78,0	1/1:1,24:25:60.13:612,60,0	1/1:1,24:25:69.16:704,69,0	1/1:0,23:23:66.15:673,66,0	0/0:18,0:18:51.16:0,51,640	0/0:25,0:25:66.17:0,66,789	0/0:20,0:20:54.17:0,54,675	0/0:14,0:14:36.11:0,36,448	0/0:19,0:19:51.16:0,51,638	0/0:21,0:21:54.15:0,54,652	1/1:1,13:14:36.08:367,36,0	1/1:2,16:18:48.11:490,48,0	1/1:1,20:21:57.13:581,57,0	1/1:0,18:18:48.11:490,48,0
chr10	17798541	.	T	TG	5380.25	PASS	AB=0.627;AC=48;AF=0.857;AN=56;BaseQRankSum=-1.593;DP=472;FS=7.095;HRun=9;HaplotypeScore=91.0076;InbreedingCoeff=0.2730;MQ=76.30;MQ0=2;MQRankSum=-1.947;QD=13.03;ReadPosRankSum=0.738;VQSLOD=4.4800;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,12:19:27.07:299,27,0	1/1:7,1:8:14.96:129,15,0	0/0:25,0:24:12.47:0,12,248	0/0:33,1:25:5.04:0,5,204	1/1:8,0:15:11.86:78,12,0	1/1:7,10:17:1.90:241,2,0	1/1:7,11:18:27.07:299,27,0	1/1:8,9:17:24.02:244,24,0	1/1:4,3:12:14.61:101,15,0	1/1:9,3:21:26.26:172,26,0	1/1:1,2:10:11.53:76,12,0	1/1:3,11:14:4.03:273,4,0	1/1:3,14:17:10.04:339,10,0	0/1:6,10:16:28.05:175,0,28	1/1:2,15:17:33.09:365,33,0	1/1:1,11:12:27.07:299,27,0	1/1:10,2:33:37.46:220,37,0	1/1:1,13:14:30.08:332,30,0	1/1:11,7:18:33.05:344,33,0	1/1:3,8:11:12.50:134,13,0	0/1:10,10:19:74.13:169,0,74	0/1:6,12:18:21.28:235,0,21	0/1:6,9:15:1.99:208,0,2	1/1:9,9:18:18.52:200,19,0	1/1:4,12:16:21.06:233,21,0	1/1:6,0:10:8.65:48,9,0	1/1:11,3:24:20.35:143,20,0	1/1:2,0:2:2.99:24,3,0
chr10	17801918	.	G	GGT	8499.05	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-15.038;DP=789;FS=4.329;HRun=0;HaplotypeScore=96.3401;InbreedingCoeff=0.9924;MQ=68.90;MQ0=2;MQRankSum=-0.013;QD=34.27;ReadPosRankSum=2.012;VQSLOD=7.3193;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:9,41:52:74.44:1718,74,0	0/0:4,0:4:12.04:0,12,148	0/0:35,0:21:34.42:0,34,329	0/0:26,0:18:35.20:0,35,407	0/0:32,0:32:78.22:0,78,935	0/0:17,0:17:45.14:0,45,554	0/0:31,0:31:72.18:0,72,869	0/0:31,0:31:66.20:0,66,802	0/0:22,0:23:36.40:0,36,541	0/0:38,0:40:93.04:0,93,1087	0/0:9,0:9:21.06:0,21,259	1/1:9,24:35:21.19:1025,21,0	1/1:5,28:33:75.25:1207,75,0	1/1:3,26:29:81.28:1307,81,0	0/0:19,0:19:48.15:0,48,591	0/0:26,0:26:66.21:0,66,813	0/0:28,0:28:72.19:0,72,860	0/0:34,0:34:93.01:0,93,1127	0/0:20,0:20:45.13:0,45,542	0/0:17,0:17:45.14:0,45,554	0/0:47,0:49:99:0,129,1512	1/1:7,28:35:32.30:1040,32,0	1/1:5,11:16:27.09:440,27,0	1/1:8,40:48:99:1762,108,0	0/0:30,0:30:75.24:0,75,922	0/0:24,0:24:63.20:0,63,776	0/0:35,0:35:90.28:0,90,1107	0/0:9,0:9:27.04:0,27,295
chr10	17803369	.	CGGGGGTG	C	2306.64	PASS	AB=0.878;AC=28;AF=0.609;AN=46;BaseQRankSum=0.821;DP=163;FS=52.518;HRun=0;HaplotypeScore=51.0780;InbreedingCoeff=-0.1253;MQ=78.54;MQ0=0;MQRankSum=-3.328;QD=17.74;ReadPosRankSum=6.449;VQSLOD=0.7211;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	1/1:4,0:4:6.01:137,6,0	0/1:7,0:5:2.86:3,0,145	0/0:10,0:6:11.68:0,12,142	0/1:9,0:9:4.87:5,0,17	0/1:5,3:8:19.10:139,0,19	1/1:7,4:11:14.33:371,14,0	0/0:5,0:5:12.01:0,12,116	0/1:3,0:4:49.42:85,0,49	1/1:1,0:2:6.02:131,6,0	0/1:3,0:3:57.10:61,0,57	0/1:9,0:9:78.37:78,0,172	1/1:6,0:6:9.16:135,9,0	0/1:6,0:6:9.80:39,0,10	0/1:3,1:4:63.21:63,0,134	0/1:4,4:8:99:208,0,118	0/1:11,0:15:99:223,0,114	1/1:2,6:8:3.01:75,3,0	./.	./.	0/0:7,0:7:15.05:0,15,334	1/1:4,0:4:5.58:35,6,0	./.	1/1:3,0:7:20.33:336,20,0	0/1:3,0:3:16.48:16,0,23	1/1:6,0:6:8.32:140,8,0	0/1:4,0:6:63.89:177,0,64	./.
chr10	17803374	.	GT	G	1538.17	PASS	AB=1.000;AC=42;AF=0.840;AN=50;BaseQRankSum=2.290;DP=146;FS=3.770;HRun=1;HaplotypeScore=40.2677;InbreedingCoeff=0.5888;MQ=75.31;MQ0=0;MQRankSum=-3.412;QD=11.92;ReadPosRankSum=1.230;VQSLOD=2.0796;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,0:6:2.99:23,3,0	1/1:1,2:3:5.99:54,6,0	0/0:6,0:4:11.99:0,12,119	0/1:9,0:5:0.13:0,0,69	1/1:3,2:5:3.26:10,3,0	1/1:3,3:6:11.80:90,12,0	1/1:10,3:13:19.67:123,20,0	0/0:5,0:5:11.98:0,12,103	1/1:3,0:3:5.61:52,6,0	1/1:1,1:2:5.99:48,6,0	1/1:2,2:4:5.87:40,6,0	1/1:7,1:8:20.13:163,20,0	1/1:3,2:5:10.68:69,11,0	1/1:5,0:5:14.99:129,15,0	1/1:7,0:7:19.05:133,19,0	1/1:7,0:7:15.19:84,15,0	1/1:13,0:13:30.16:225,30,0	1/1:6,0:6:2.92:17,3,0	./.	./.	0/0:6,0:6:14.96:0,15,136	1/1:2,2:4:5.96:44,6,0	./.	1/1:6,1:7:20.36:141,20,0	1/1:3,0:3:5.72:50,6,0	1/1:5,1:6:11.35:80,11,0	1/1:5,1:6:15.25:102,15,0	0/1:1,0:1:0:0,0,0
chr10	17803383	.	TG	T	992.30	PASS	AB=0.918;AC=32;AF=0.615;AN=52;BaseQRankSum=0.148;DP=162;FS=27.893;HRun=9;HaplotypeScore=42.0941;InbreedingCoeff=0.2847;MQ=67.95;MQ0=0;MQRankSum=-0.462;QD=8.27;ReadPosRankSum=1.895;VQSLOD=0.0546;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:4:8.86:62,9,0	1/1:2,1:3:8.93:64,9,0	0/0:6,1:5:7.23:0,7,41	0/0:8,0:3:5.93:0,6,41	1/1:4,2:6:4.56:31,5,0	0/1:5,0:5:1.44:1,0,29	0/1:13,1:14:0.97:1,0,146	1/1:2,5:7:9:82,9,0	0/1:5,1:6:28.29:45,0,28	1/1:2,4:6:14.98:127,15,0	0/1:4,0:4:2.54:24,0,3	0/1:8,0:8:6.98:35,0,7	1/1:3,0:3:1.95:46,2,0	0/0:2,0:2:1.55:0,2,4	0/1:10,0:10:3.96:4,0,110	0/0:10,0:10:20.67:0,21,142	0/1:10,4:14:13.29:169,0,13	0/0:8,0:8:7.89:0,8,51	./.	1/1:1,0:1:2.99:23,3,0	1/1:2,3:5:6:55,6,0	1/1:2,2:4:5.54:28,6,0	./.	1/1:2,3:5:15:130,15,0	0/0:7,0:7:14.99:0,15,107	1/1:1,5:6:14.22:113,14,0	0/1:5,2:7:2.72:91,0,3	1/1:2,0:2:2.96:19,3,0
chr10	17803787	.	GT	G	8366.62	PASS	AB=0.774;AC=38;AF=0.679;AN=56;BaseQRankSum=10.933;DP=649;FS=4.140;HRun=11;HaplotypeScore=101.4222;InbreedingCoeff=0.8548;MQ=69.18;MQ0=0;MQRankSum=-0.285;QD=17.50;ReadPosRankSum=2.388;VQSLOD=5.3929;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,1:28:53.55:0,54,775	1/1:0,9:9:23.61:197,24,0	0/0:11,0:11:17.15:0,17,191	0/1:13,0:13:3.56:4,0,153	1/1:4,29:35:84.86:668,85,0	1/1:4,30:36:30:637,30,0	1/1:1,16:17:47.94:394,48,0	1/1:13,23:38:69.58:534,70,0	1/1:4,22:27:58.95:474,59,0	1/1:5,24:29:68.89:566,69,0	1/1:2,24:28:72.95:576,73,0	0/0:17,0:17:42.09:0,42,440	0/0:20,1:21:26.25:0,26,455	0/0:22,1:23:23.44:0,23,438	1/1:5,22:27:59.91:492,60,0	1/1:2,27:30:64.96:523,65,0	1/1:0,12:13:38:301,38,0	1/1:2,19:21:12.95:313,13,0	1/1:6,13:19:20.36:299,20,0	1/1:2,22:24:62.92:517,63,0	1/1:3,17:20:47.91:394,48,0	0/0:36,0:37:95.26:0,95,959	0/0:17,1:18:26.47:0,26,474	0/0:16,0:16:23.40:0,23,397	1/1:3,13:16:35.96:296,36,0	1/1:5,21:28:34.97:469,35,0	0/1:6,27:34:43.93:467,0,44	1/1:0,14:14:29.97:246,30,0
chr10	17804211	.	GC	G	3837.03	PASS	AB=0.875;AC=13;AF=0.232;AN=56;BaseQRankSum=9.274;DP=613;FS=2.655;HRun=7;HaplotypeScore=66.7617;InbreedingCoeff=0.9046;MQ=83.84;MQ0=0;MQRankSum=-2.505;QD=25.75;ReadPosRankSum=3.712;VQSLOD=4.4259;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,147,1826	0/1:6,1:7:12.15:12,0,171	0/0:27,0:27:63.01:0,63,652	0/0:15,0:15:40.33:0,40,429	0/0:28,0:28:78.25:0,78,975	1/1:1,21:22:60.14:611,60,0	1/1:3,25:28:72.16:735,72,0	0/0:14,0:14:30.09:0,30,365	0/0:15,0:15:45.14:0,45,566	0/0:22,0:22:57.18:0,57,715	0/0:22,0:22:66.21:0,66,829	0/0:11,0:11:30.10:0,30,377	0/0:15,0:15:45.14:0,45,562	0/0:17,0:17:45.14:0,45,565	1/1:2,18:20:51.12:520,51,0	1/1:1,25:26:69.15:704,69,0	0/0:28,0:27:75.24:0,75,944	1/1:1,31:32:90.20:918,90,0	0/0:18,0:18:45.12:0,45,550	0/0:25,0:25:69.22:0,69,861	0/0:37,0:37:99:0,108,1358	0/0:21,0:22:66.08:0,66,806	0/0:19,0:19:54.17:0,54,666	0/0:25,0:25:69.21:0,69,855	1/1:2,12:14:33.07:336,33,0	0/0:25,0:25:72.22:0,72,892	0/0:20,0:20:54.17:0,54,675	0/0:8,0:8:24.08:0,24,302
chr10	17804924	.	A	AC	15738.95	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=6.322;DP=1068;FS=19.149;HRun=6;HaplotypeScore=203.1743;InbreedingCoeff=0.9922;MQ=59.30;MQ0=10;MQRankSum=1.575;QD=19.75;ReadPosRankSum=6.701;VQSLOD=2.3509;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:62,0:63:99:866,119,0	1/1:1,14:16:34.19:418,34,0	0/0:44,0:34:74.92:0,75,747	0/0:41,0:30:58.19:0,58,592	1/1:2,15:17:11.56:457,12,0	1/1:23,0:22:56.50:400,57,0	1/1:39,0:40:37.19:606,37,0	0/0:41,0:41:99:0,99,1005	1/1:8,36:43:81.22:999,81,0	1/1:7,27:34:53.77:977,54,0	1/1:2,21:23:60.02:747,60,0	1/1:54,0:51:99:812,110,0	1/1:38,0:37:98.33:718,98,0	1/1:44,0:44:99:785,106,0	1/1:52,0:51:99:916,125,0	1/1:46,0:46:95.15:675,95,0	1/1:5,38:43:80.77:1316,81,0	1/1:38,0:38:28.46:579,28,0	0/0:18,0:16:39.08:0,39,397	0/0:29,0:29:84.17:0,84,848	0/0:95,0:95:99:0,242,2467	1/1:44,0:44:99:804,112,0	1/1:27,0:27:59.55:426,60,0	1/1:36,0:35:73.48:545,73,0	1/1:42,0:40:99:720,104,0	1/1:7,28:35:26.18:958,26,0	1/1:1,22:23:56.61:716,57,0	1/1:4,9:13:24.08:302,24,0
chr10	17804929	.	C	CA	21175.79	PASS	AB=0.996;AC=38;AF=0.679;AN=56;BaseQRankSum=-1.486;DP=1087;FS=41.726;HRun=0;HaplotypeScore=189.1642;InbreedingCoeff=0.5343;MQ=58.71;MQ0=10;MQRankSum=-0.990;QD=26.08;ReadPosRankSum=10.365;VQSLOD=1.0625;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,59:64:99:1910,135,0	0/1:16,0:16:5.50:117,0,6	0/0:45,0:30:81.14:0,81,1017	0/0:38,0:26:69.51:0,70,872	0/1:16,0:16:4.75:145,0,5	1/1:2,20:22:63.04:886,63,0	1/1:4,37:40:80.23:1404,80,0	0/0:47,0:47:99:0,132,1659	0/1:45,1:45:57.22:262,0,57	0/1:37,0:37:87.17:203,0,87	1/1:24,0:24:5.38:158,5,0	1/1:1,56:53:99:1783,126,0	1/1:0,41:40:99:1531,102,0	1/1:1,42:43:99:1650,108,0	1/1:5,50:55:99:1973,141,0	1/1:4,42:46:99:1528,111,0	1/1:45,0:45:51.61:399,52,0	1/1:4,32:36:66.75:1276,67,0	0/0:20,0:18:51.11:0,51,622	0/0:30,0:30:87.26:0,87,1153	0/0:95,0:94:99:0,263,3539	1/1:2,43:44:99:1742,113,0	1/1:1,27:28:60.20:918,60,0	1/1:5,33:36:78.55:1172,79,0	1/1:3,39:40:99:1588,108,0	0/1:35,0:35:55.71:197,0,56	1/1:22,0:22:52.48:245,52,0	0/1:11,0:11:8.25:90,0,8
chr10	17805003	.	T	TCA	766.39	PASS	AB=0.667;AC=9;AF=0.167;AN=54;BaseQRankSum=6.621;DP=959;FS=15.376;HRun=0;HaplotypeScore=222.3079;InbreedingCoeff=0.8615;MQ=55.86;MQ0=10;MQRankSum=-0.991;QD=13.45;ReadPosRankSum=-4.234;VQSLOD=1.1369;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:60,0:60:99:0,135,1769	0/0:10,0:10:15.05:0,15,200	0/0:40,0:15:32.89:0,33,386	0/0:43,0:24:33.84:0,34,476	0/0:16,0:16:36.06:0,36,471	./.	1/1:6,2:6:5.98:47,6,0	0/0:45,0:43:99:0,101,1317	0/0:52,0:52:99:0,118,1612	0/0:43,0:43:99:0,108,1380	0/0:29,0:29:78.26:0,78,1037	0/0:58,0:57:99:0,120,1678	0/0:53,0:52:99:0,135,1773	0/0:36,0:36:93.26:0,93,1188	1/1:9,6:15:12.03:181,12,0	1/1:7,9:16:18.05:284,18,0	0/0:41,0:41:98.83:0,99,1313	0/1:6,5:12:2.16:303,0,2	0/0:17,0:15:36.10:0,36,454	0/0:25,0:25:59.89:0,60,793	0/0:114,1:114:99:0,253,3353	0/0:47,0:47:99:0,112,1412	0/0:26,0:26:59.67:0,60,751	0/0:48,0:48:99:0,123,1570	1/1:3,3:6:9:102,9,0	0/0:49,0:49:99:0,126,1676	0/0:28,0:28:69.17:0,69,882	0/0:17,0:15:42.14:0,42,558
chr10	17805081	.	GCA	G	24556.14	PASS	AB=0.581;AC=51;AF=0.944;AN=54;BaseQRankSum=-4.228;DP=977;FS=1.131;HRun=0;HaplotypeScore=197.9303;InbreedingCoeff=0.2235;MQ=50.56;MQ0=49;MQRankSum=3.820;QD=27.16;ReadPosRankSum=2.486;VQSLOD=5.6459;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:23,25:46:99:1305,105,0	1/1:0,7:7:18.06:229,18,0	./.	0/0:42,0:1:0:0,0,0	1/1:6,23:29:1.11:560,1,0	1/1:1,15:16:42.13:527,42,0	1/1:4,28:29:69.18:860,69,0	1/1:8,36:37:87.18:1083,87,0	1/1:10,25:35:84.27:1052,84,0	1/1:15,32:41:99:1250,99,0	1/1:6,11:17:19.12:398,19,0	1/1:14,46:59:99:1921,159,0	1/1:18,36:53:99:1621,129,0	1/1:15,29:44:64.33:1324,64,0	1/1:3,29:32:87.03:1091,87,0	1/1:2,21:23:66.21:827,66,0	1/1:13,18:31:10.12:690,10,0	0/1:7,18:25:84.88:684,0,85	1/1:5,12:16:33.10:419,33,0	1/1:4,25:29:51.10:649,51,0	1/1:15,92:104:99:2393,182,0	1/1:15,26:41:87.26:1081,87,0	1/1:7,24:30:66.07:839,66,0	1/1:19,20:39:80.72:968,81,0	1/1:0,12:12:24.07:302,24,0	1/1:15,31:46:99:1512,120,0	1/1:7,18:25:57.16:705,57,0	1/1:7,6:11:21.07:267,21,0
chr10	17805137	.	A	AAC	24262.68	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-5.485;DP=1010;FS=1.783;HRun=0;HaplotypeScore=204.4191;InbreedingCoeff=0.9982;MQ=58.66;MQ0=17;MQRankSum=-0.732;QD=32.31;ReadPosRankSum=3.157;VQSLOD=5.8112;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,27:40:96.23:1544,96,0	1/1:4,6:10:18.06:300,18,0	0/0:45,0:31:55.59:0,56,527	0/0:33,0:24:33.59:0,34,438	1/1:9,13:20:36.12:590,36,0	1/1:5,20:25:48.15:757,48,0	1/1:6,30:35:57.18:931,57,0	0/0:33,0:32:84.26:0,84,1069	1/1:11,39:49:99:1825,114,0	1/1:12,31:39:99:1548,99,0	1/1:6,14:19:36.12:557,36,0	1/1:16,41:55:99:2130,132,0	1/1:11,39:50:99:1793,111,0	1/1:14,23:38:50.26:924,50,0	1/1:14,33:46:51.72:1417,52,0	1/1:7,21:28:72.23:1175,72,0	1/1:13,20:32:66.16:1018,66,0	1/1:13,15:28:62.21:999,62,0	0/0:27,0:26:65.88:0,66,813	0/0:33,0:33:78.25:0,78,1002	0/0:88,0:85:99:0,196,2459	1/1:10,24:33:69.19:1069,69,0	1/1:12,25:35:48.12:752,48,0	1/1:14,32:45:77.86:1262,78,0	1/1:7,12:17:39.12:629,39,0	1/1:10,28:35:83.67:1244,84,0	1/1:7,20:28:71.70:1108,72,0	1/1:2,16:18:42.14:691,42,0
chr10	17805247	.	A	AAC	5901.27	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-7.261;DP=1089;FS=6.065;HRun=0;HaplotypeScore=150.1820;InbreedingCoeff=0.9520;MQ=57.71;MQ0=16;MQRankSum=3.800;QD=25.55;ReadPosRankSum=1.317;VQSLOD=5.5964;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:47:99:0,100,1148	0/0:10,0:10:21.07:0,21,258	0/0:48,0:20:14.51:0,15,100	0/0:60,1:30:1.86:0,2,232	0/0:26,0:26:61.43:0,61,728	1/1:4,18:22:39.13:623,39,0	1/1:12,27:40:36.11:587,36,0	0/0:42,0:41:78.20:0,78,931	0/0:27,0:27:72.09:0,72,833	0/0:41,0:41:99:0,99,1210	0/0:23,0:23:60.18:0,60,724	0/0:53,0:54:99:0,135,1576	0/0:29,0:29:75.14:0,75,876	0/0:43,0:43:99:0,117,1387	1/1:31,20:51:31.22:1407,31,0	1/1:9,33:42:57.19:915,57,0	0/0:41,0:41:89.69:0,90,1087	1/1:29,12:40:16.31:1172,16,0	0/0:20,0:16:24.29:0,24,348	0/0:21,0:21:56.88:0,57,656	0/0:98,0:100:99:0,246,2894	0/0:35,0:37:84.02:0,84,967	0/0:33,0:33:84.19:0,84,990	0/0:67,0:66:99:0,150,1817	1/1:15,19:34:56.67:1197,57,0	0/0:44,0:43:99:0,114,1316	0/0:23,0:24:59.98:0,60,698	0/0:19,0:19:48.07:0,48,561
chr10	17810276	.	AACG	A	3747.76	PASS	AC=34;AF=0.773;AN=44;BaseQRankSum=1.231;DP=602;FS=2.243;HRun=0;HaplotypeScore=147.0502;InbreedingCoeff=0.7602;MQ=65.42;MQ0=4;MQRankSum=-1.237;QD=8.46;ReadPosRankSum=0.655;VQSLOD=2.9607;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:37,0:37:25.29:162,25,0	./.	./.	./.	0/0:5,0:5:3.01:0,3,45	1/1:10,7:17:15.05:199,15,0	1/1:27,17:45:53.81:697,54,0	./.	1/1:18,0:18:35.71:251,36,0	0/0:24,0:22:6.49:0,6,89	./.	1/1:38,0:38:53.60:391,54,0	1/1:30,0:32:35.71:251,36,0	1/1:31,0:31:27.25:189,27,0	1/1:19,12:31:27.09:358,27,0	1/1:13,12:25:33.11:438,33,0	0/0:30,0:39:8.83:0,9,72	1/1:12,12:24:29.96:398,30,0	1/1:30,0:30:8.93:63,9,0	1/1:14,0:14:5.95:42,6,0	1/1:38,0:37:2.98:21,3,0	1/1:21,0:21:8.93:63,9,0	1/1:12,0:12:5.95:42,6,0	1/1:20,0:20:8.93:63,9,0	1/1:6,4:10:9.03:119,9,0	0/0:14,0:13:15.04:0,15,214	0/0:11,0:17:15.02:0,15,164	./.
chr10	17810289	.	ACGACGACG	A	3803.11	PASS	AB=0.854;AC=12;AF=0.214;AN=56;BaseQRankSum=12.716;DP=560;FS=0.436;HRun=0;HaplotypeScore=184.0475;InbreedingCoeff=-0.2752;MQ=57.80;MQ0=20;MQRankSum=-11.954;QD=14.03;ReadPosRankSum=10.452;VQSLOD=1.4034;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:27,12:39:90.32:606,0,90	0/0:5,0:5:12.01:0,12,198	0/0:10,0:8:21.06:0,21,265	0/1:13,0:9:7.70:8,0,197	0/0:5,0:5:15.05:0,15,291	0/0:19,0:19:51.17:0,51,872	0/0:45,0:43:99:0,120,2221	0/0:12,0:12:33.10:0,33,405	0/1:22,0:20:99:515,0,221	0/0:24,0:17:49.60:0,50,928	0/0:5,0:4:12.04:0,12,261	0/1:18,17:35:99:980,0,160	0/1:18,11:29:99:621,0,161	0/1:16,10:26:99:496,0,176	0/0:29,0:28:72.23:0,72,1278	0/0:21,0:21:60.19:0,60,1149	0/0:36,0:36:59.99:0,60,1133	0/0:24,0:24:60.20:0,60,1067	0/1:17,0:17:99:101,0,408	0/1:10,0:10:76.48:76,0,194	0/1:30,0:29:8.29:8,0,420	0/1:15,3:18:99:135,0,165	0/1:7,5:12:59.06:120,0,59	0/1:15,5:20:99:137,0,128	0/0:13,0:13:30.10:0,30,520	0/0:20,0:16:45.14:0,45,1144	0/0:19,0:17:39.13:0,39,1041	0/0:2,0:2:6:0,6,63
chr10	17810301	.	ACGACGACGACG	A	1866.84	PASS	AB=0.969;AC=11;AF=0.204;AN=54;BaseQRankSum=13.290;DP=558;FS=0.000;HRun=0;HaplotypeScore=227.1202;InbreedingCoeff=-0.2507;MQ=55.87;MQ0=20;MQRankSum=-10.946;QD=7.18;ReadPosRankSum=10.656;VQSLOD=1.1150;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:37,0:37:96.34:96,0,510	0/0:5,0:5:12.03:0,12,238	0/0:12,0:11:26.36:0,26,341	0/0:13,0:8:18.06:0,18,294	0/0:6,0:6:18.06:0,18,368	0/0:16,0:16:42.14:0,42,1103	0/0:42,0:40:99:0,114,3102	0/0:12,0:12:36.10:0,36,438	0/1:11,12:21:76.91:946,0,77	0/0:20,0:13:38.15:0,38,1033	0/0:8,0:7:21.07:0,21,463	0/1:33,0:33:99:305,0,483	0/1:26,0:26:99:203,0,414	0/1:27,0:27:99:121,0,634	0/0:28,0:27:72.24:0,72,1890	0/0:21,0:21:60.20:0,60,1745	0/0:33,0:33:38.83:0,39,1126	0/0:21,0:21:54.13:0,54,1551	0/1:19,0:19:99:152,0,478	0/1:10,0:10:99:117,0,152	0/1:32,0:31:15.78:16,0,561	0/1:20,0:20:11.72:12,0,577	0/1:16,0:16:6.35:6,0,403	0/1:17,0:17:36.09:36,0,287	0/0:15,0:15:36.10:0,36,825	0/0:26,0:22:64.10:0,64,1747	0/0:20,0:18:41.80:0,42,1395	./.
chr10	17810856	.	T	TTCCCTCCC	3965.11	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-1.051;DP=424;FS=1.257;HRun=0;HaplotypeScore=122.3933;InbreedingCoeff=0.9620;MQ=61.73;MQ0=1;MQRankSum=-9.120;QD=40.88;ReadPosRankSum=-2.558;VQSLOD=3.0732;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:19,1:20:21:355,21,0	0/0:4,0:4:12.04:0,12,312	0/0:17,0:11:14.19:0,14,250	0/0:20,0:14:17.79:0,18,295	0/0:24,0:24:66.68:0,67,1621	0/0:10,0:10:18.06:0,18,449	0/0:17,0:17:28.48:0,28,710	0/0:22,0:22:36.11:0,36,831	0/0:18,0:18:36.12:0,36,937	0/0:21,0:21:33.11:0,33,810	0/0:8,0:8:21.06:0,21,422	1/1:6,11:17:24.05:743,24,0	1/1:7,6:14:30.09:1138,30,0	1/1:8,3:11:18.06:499,18,0	0/0:12,0:12:24.08:0,24,584	0/0:16,0:16:24.08:0,24,611	0/0:19,0:19:24.81:0,25,627	0/0:9,0:9:18.06:0,18,462	0/0:12,0:12:21.02:0,21,320	0/0:13,0:13:36.12:0,36,937	0/0:29,0:28:66.23:0,66,1672	1/1:8,0:8:12.93:282,13,0	1/1:6,5:11:24.08:643,24,0	1/1:14,2:16:9.03:304,9,0	0/0:12,0:12:30.09:0,30,719	0/0:14,0:14:24.07:0,24,570	0/0:17,0:17:39.12:0,39,864	0/0:13,0:13:15.05:0,15,391
chr10	17810884	.	TCTTCCTTCCTTCCTTCCTTC	T	2469.17	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=4.403;DP=394;FS=8.557;HRun=0;HaplotypeScore=199.6773;InbreedingCoeff=0.7907;MQ=56.04;MQ0=4;MQRankSum=-5.364;QD=30.11;ReadPosRankSum=0.476;VQSLOD=1.1968;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:17:42.14:0,42,1762	0/0:5,0:5:12.04:0,12,743	0/0:22,0:15:9.03:0,9,179	0/0:21,0:9:3.01:0,3,119	0/0:26,0:26:54.17:0,54,3899	1/1:3,10:13:9.03:340,9,0	1/1:11,11:22:15.05:770,15,0	0/0:15,0:14:12.04:0,12,289	0/0:9,0:18:24.07:0,24,1218	0/0:21,0:21:54.19:0,54,4086	0/0:6,0:6:9.03:0,9,671	0/0:10,0:14:30.10:0,30,1524	0/0:8,0:15:27.05:0,27,1346	0/0:5,0:9:13.29:0,13,646	1/1:5,6:11:5.22:309,5,0	1/1:6,5:11:12.04:642,12,0	0/0:16,0:16:38.34:0,38,2487	1/1:7,7:14:6.02:290,6,0	0/0:9,0:9:6.02:0,6,157	0/0:10,0:14:21.06:0,21,338	0/0:22,0:21:25.58:0,26,497	0/0:2,0:5:9.03:0,9,486	0/0:6,0:11:17.98:0,18,868	0/0:5,0:10:9.30:0,9,372	1/1:4,7:11:6.02:282,6,0	0/0:15,0:15:36.12:0,36,3064	0/0:15,0:15:30.10:0,30,2426	0/0:6,0:6:18.06:0,18,1577
chr10	17812968	.	C	CAGAA	28297.16	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-12.763;DP=619;FS=0.788;HRun=0;HaplotypeScore=87.9262;InbreedingCoeff=0.9983;MQ=69.81;MQ0=1;MQRankSum=-2.354;QD=60.99;ReadPosRankSum=6.108;VQSLOD=6.5723;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,26:32:46.96:1527,47,0	1/1:2,10:12:30.07:748,30,0	0/0:27,0:24:62.23:0,62,991	0/0:19,0:16:19.18:0,19,605	1/1:1,26:28:75.05:1693,75,0	1/1:4,18:25:45.15:1200,45,0	1/1:2,15:17:51.18:1351,51,0	0/0:40,0:40:99:0,105,1716	1/1:2,18:21:33.11:888,33,0	1/1:1,25:26:78.20:1774,78,0	1/1:1,19:21:60.16:1538,60,0	1/1:0,13:13:36.12:969,36,0	1/1:2,15:18:36.12:956,36,0	1/1:1,22:23:63.22:1684,63,0	1/1:2,23:25:60.21:1608,60,0	1/1:0,18:18:45.15:1214,45,0	1/1:1,16:18:39.13:1052,39,0	1/1:4,25:30:45.06:1090,45,0	0/0:26,0:26:78.24:0,78,1407	0/0:20,0:20:32.30:0,32,920	0/0:23,0:23:66.16:0,66,1092	1/1:0,12:13:33.03:766,33,0	1/1:1,13:14:30.10:808,30,0	1/1:1,18:19:51.18:1375,51,0	1/1:1,14:15:42.14:1131,42,0	1/1:1,20:21:63.22:1608,63,0	1/1:0,22:28:57.05:1536,57,0	1/1:0,26:26:66.23:1781,66,0
chr10	17813131	.	T	TTC	5140.75	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-12.089;DP=686;FS=1.302;HRun=0;HaplotypeScore=93.3769;InbreedingCoeff=0.9982;MQ=78.04;MQ0=7;MQRankSum=-0.939;QD=34.97;ReadPosRankSum=2.247;VQSLOD=6.8927;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:67.85:0,68,747	0/0:7,0:7:21.06:0,21,251	0/0:42,0:36:62.32:0,62,775	0/0:44,0:34:43.61:0,44,533	0/0:26,0:26:66.20:0,66,813	1/1:6,31:37:40.81:1177,41,0	1/1:4,10:14:24.08:384,24,0	0/0:34,0:34:90.26:0,90,1091	0/0:22,0:22:54.09:0,54,630	0/0:24,0:24:66.19:0,66,794	0/0:14,0:14:36.11:0,36,450	0/0:31,0:31:57.17:0,57,702	0/0:15,0:15:27.08:0,27,326	0/0:25,0:25:54.10:0,54,641	1/1:3,24:26:63.21:1029,63,0	1/1:3,18:21:48.16:781,48,0	0/0:21,0:21:26.37:0,26,510	1/1:2,27:28:63.21:1027,63,0	0/0:17,0:17:39.08:0,39,432	0/0:20,0:20:60.18:0,60,739	0/0:19,0:20:50.99:0,51,614	0/0:18,0:18:42.12:0,42,513	0/0:22,0:22:57.08:0,57,700	0/0:37,0:37:72.04:0,72,828	1/1:2,16:18:45.15:743,45,0	0/0:31,0:31:78.24:0,78,965	0/0:25,0:25:69.15:0,69,797	0/0:14,0:14:39.12:0,39,487
chr10	17813209	.	GTCTCTGTC	G	982.54	PASS	AB=0.562;AC=12;AF=0.214;AN=56;BaseQRankSum=6.503;DP=709;FS=2.043;HRun=0;HaplotypeScore=178.8776;InbreedingCoeff=0.8000;MQ=57.70;MQ0=9;MQRankSum=-6.355;QD=5.52;ReadPosRankSum=1.217;VQSLOD=2.7019;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,22:28:5.94:101,6,0	0/0:4,0:4:12.04:0,12,500	0/0:33,0:17:51.06:0,51,1158	0/0:48,0:19:38.32:0,38,952	0/0:12,0:12:36.11:0,36,1031	0/0:24,0:24:66.21:0,66,2003	0/0:36,0:36:90.25:0,90,2681	0/0:36,0:35:78.24:0,78,1994	0/0:31,0:31:78.16:0,78,2558	0/0:29,0:28:72.23:0,72,2237	0/0:14,0:14:39.08:0,39,1068	1/1:2,29:31:15.01:298,15,0	1/1:2,23:25:26.96:713,27,0	1/1:2,23:25:0.47:1,0,0	0/0:31,0:31:63.19:0,63,2260	0/0:17,0:17:28.42:0,28,1296	0/0:26,0:26:72.25:0,72,2635	0/0:29,0:28:66.08:0,66,2183	0/0:20,0:19:39.02:0,39,849	0/0:15,0:15:36.10:0,36,1024	0/0:31,0:31:84.22:0,84,2837	0/1:4,17:21:0.19:0,0,0	1/1:2,14:16:0.40:1,0,0	0/1:8,24:32:0:0,0,0	0/0:25,0:25:51.16:0,51,1897	0/0:28,0:27:69.20:0,69,2179	0/0:22,0:22:51.18:0,51,1883	0/0:20,0:20:57.14:0,57,1926
chr10	17815097	.	TG	T	6698.17	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=16.477;DP=755;FS=10.193;HRun=2;HaplotypeScore=83.2180;InbreedingCoeff=0.9998;MQ=80.57;MQ0=0;MQRankSum=-2.273;QD=34.71;ReadPosRankSum=3.281;VQSLOD=4.8156;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,36:36:99:1285,99,0	0/0:11,0:11:33.11:0,33,495	0/0:18,0:18:45.15:0,45,663	0/0:20,0:20:57.10:0,57,791	0/0:13,0:13:39.12:0,39,563	0/0:24,0:24:72.24:0,72,1077	0/0:41,0:41:99:0,117,1709	0/0:26,0:26:72.24:0,72,1078	0/0:27,0:27:81.26:0,81,1194	0/0:33,0:33:93.31:0,93,1392	0/0:13,0:13:36.11:0,36,513	1/1:1,29:30:81.26:1051,81,0	1/1:0,31:31:87.28:1129,87,0	1/1:0,30:30:81.26:1052,81,0	0/0:38,0:38:99:0,114,1612	0/0:26,0:26:78.26:0,78,1167	0/0:39,0:39:99:0,114,1708	0/0:39,0:39:99:0,114,1703	0/0:28,0:28:78.24:0,78,1123	0/0:18,0:18:54.15:0,54,758	0/0:66,0:66:99:0,190,2765	1/1:1,18:19:48.16:623,48,0	1/1:0,14:14:30.10:390,30,0	1/1:0,33:33:90.29:1169,90,0	0/0:25,0:25:75.15:0,75,1054	0/0:25,0:25:72.23:0,72,1042	0/0:16,0:16:45.15:0,45,674	0/0:16,0:16:48.16:0,48,719
chr10	17818607	.	C	CAT	11726.64	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-17.106;DP=1106;FS=6.056;HRun=0;HaplotypeScore=150.8999;InbreedingCoeff=1.0000;MQ=60.90;MQ0=7;MQRankSum=0.560;QD=46.35;ReadPosRankSum=0.757;VQSLOD=5.0222;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:48:99:0,111,735	0/0:16,0:16:46.04:0,46,687	0/0:39,0:27:67.17:0,67,1025	0/0:48,0:39:99:0,102,1375	0/0:30,0:30:87.24:0,87,1223	1/1:2,36:38:92.56:1793,93,0	1/1:2,43:46:96.33:1847,96,0	0/0:58,0:58:99:0,154,2088	0/0:54,0:54:99:0,156,2276	0/0:42,0:42:99:0,120,1732	0/0:31,0:31:87.30:0,87,1329	0/0:46,0:46:86.66:0,87,774	0/0:33,0:33:70.29:0,70,549	0/0:39,0:39:80.28:0,80,608	1/1:13,45:56:99:2904,159,0	1/1:1,59:60:99:2719,141,0	0/0:29,0:29:79.73:0,80,1128	1/1:6,21:27:78.14:1322,78,0	0/0:26,0:26:78.15:0,78,1010	0/0:37,0:37:99:0,108,1600	0/0:39,0:39:99:0,111,1631	0/0:43,0:43:49.82:0,50,638	0/0:34,0:34:94.28:0,94,592	0/0:51,0:51:88.96:0,89,767	1/1:5,18:23:63.13:1142,63,0	0/0:41,0:41:99:0,123,1779	0/0:40,0:39:99:0,117,1722	0/0:28,0:28:84.23:0,84,1245
chr10	17818725	.	CAT	C	8712.31	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=16.401;DP=1170;FS=5.040;HRun=0;HaplotypeScore=148.6154;InbreedingCoeff=0.9911;MQ=64.84;MQ0=5;MQRankSum=-1.667;QD=33.64;ReadPosRankSum=3.787;VQSLOD=6.8816;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,105,1901	0/0:15,0:15:42.14:0,42,770	0/0:41,0:35:93.15:0,93,1592	0/0:43,0:42:80.73:0,81,1622	0/0:31,0:31:90.31:0,90,1603	1/1:2,27:29:72.24:1031,72,0	1/1:4,34:38:99:1544,108,0	0/0:56,0:55:99:0,154,2786	0/0:53,0:53:99:0,157,2852	0/0:52,0:52:99:0,154,2797	0/0:30,0:30:90.29:0,90,1615	0/0:54,0:54:99:0,157,2818	0/0:48,0:48:99:0,135,2431	0/0:45,0:45:99:0,126,2270	1/1:1,64:64:99:2063,144,0	1/1:4,45:47:10.39:1523,10,0	0/0:36,0:36:99:0,99,1794	1/1:3,35:37:93.14:1303,93,0	0/0:31,0:31:84.29:0,84,1515	0/0:24,0:24:69.24:0,69,1257	0/0:75,0:75:99:0,202,3674	0/0:23,0:23:66.21:0,66,1180	0/0:25,0:25:69.24:0,69,1256	0/0:58,0:58:99:0,148,2683	1/1:1,39:39:87.29:1247,87,0	0/0:49,0:49:99:0,141,2574	0/0:50,0:50:99:0,148,2679	0/0:25,0:25:66.22:0,66,1176
chr10	17818919	.	T	TAC	9021.76	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-6.657;DP=1119;FS=0.297;HRun=0;HaplotypeScore=196.2748;InbreedingCoeff=1.0000;MQ=59.39;MQ0=2;MQRankSum=-0.471;QD=39.57;ReadPosRankSum=3.898;VQSLOD=5.1081;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:60,0:60:99:0,117,1807	0/0:15,0:15:45.12:0,45,562	0/0:53,0:31:67.04:0,67,814	0/0:48,0:35:75.68:0,76,938	0/0:32,0:32:81.22:0,81,1032	1/1:1,33:34:81.28:1389,81,0	1/1:2,30:32:60.39:1142,60,0	0/0:46,0:46:99:0,108,1368	0/0:51,0:51:99:0,134,1724	0/0:32,0:32:84.27:0,84,1100	0/0:25,0:25:60.19:0,60,787	0/0:45,0:45:99:0,108,1541	0/0:41,0:41:99:0,111,1415	0/0:58,0:58:99:0,156,1970	1/1:6,36:42:99:1695,99,0	1/1:3,42:46:74.96:1863,75,0	0/0:48,0:48:99:0,102,1286	1/1:12,27:39:62.35:1584,62,0	0/0:17,0:17:45.14:0,45,576	0/0:38,0:38:99:0,105,1361	0/0:56,0:56:99:0,136,1936	0/0:40,0:40:99:0,105,1378	0/0:31,0:31:90.26:0,90,1181	0/0:47,0:47:99:0,123,1615	1/1:3,32:35:81.01:1349,81,0	0/0:38,0:38:96.30:0,96,1247	0/0:46,0:46:99:0,126,1603	0/0:21,0:20:44.68:0,45,625
chr10	17821752	.	AAAGGAGACATGGG	A	14275.61	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=16.754;DP=742;FS=4.237;HRun=0;HaplotypeScore=274.7000;InbreedingCoeff=0.9970;MQ=83.74;MQ0=0;MQRankSum=-15.160;QD=83.48;ReadPosRankSum=1.686;VQSLOD=3.8809;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,120,7305	1/1:1,8:9:24.08:958,24,0	0/0:25,0:25:61.51:0,62,3141	0/0:26,0:26:71.96:0,72,4022	1/1:2,16:18:36.12:1436,36,0	0/0:24,0:24:72.23:0,72,4404	0/0:21,0:21:51.17:0,51,2657	0/0:31,0:31:93.32:0,93,5332	1/1:2,30:32:69.24:2732,69,0	1/1:0,22:22:66.18:2143,66,0	1/1:0,11:11:30.10:1197,30,0	0/0:41,0:41:99:0,123,8031	0/0:39,0:40:99:0,117,7041	0/0:34,0:34:99:0,99,6254	0/0:36,0:36:99:0,105,6669	0/0:28,0:28:81.28:0,81,5217	1/1:4,19:23:30.10:1197,30,0	0/0:26,0:26:72.25:0,72,4200	0/0:18,0:18:48.15:0,48,2675	0/0:27,0:27:81.28:0,81,4680	0/0:43,0:43:99:0,117,7516	0/0:31,0:31:90.30:0,90,5293	0/0:28,0:28:84.29:0,84,4476	0/0:30,0:30:84.29:0,84,5413	0/0:17,0:16:51.18:0,51,3132	1/1:2,23:25:63.13:1977,63,0	1/1:2,20:21:51.18:2036,51,0	1/1:0,9:9:15.05:599,15,0
chr10	17822130	.	CTG	C	4143.16	PASS	AB=0.512;AC=11;AF=0.196;AN=56;BaseQRankSum=-7.489;DP=558;FS=0.000;HRun=0;HaplotypeScore=90.7674;InbreedingCoeff=0.9284;MQ=69.94;MQ0=1;MQRankSum=1.423;QD=35.72;ReadPosRankSum=3.502;VQSLOD=6.0541;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:93.30:0,93,1707	0/0:7,0:7:21.07:0,21,382	0/0:9,0:8:18.05:0,18,282	0/0:8,0:8:20.51:0,21,230	0/0:28,0:28:75.24:0,75,1351	1/1:1,14:14:30.10:442,30,0	1/1:2,11:13:27.09:398,27,0	0/0:30,0:30:78.26:0,78,1423	0/0:24,0:24:66.23:0,66,1226	0/0:26,0:26:72.24:0,72,1294	0/0:13,0:13:36.11:0,36,637	0/0:17,0:17:51.17:0,51,947	0/0:26,0:26:78.27:0,78,1453	0/0:15,0:15:45.15:0,45,843	1/1:0,22:22:57.19:839,57,0	0/1:1,20:21:2.01:697,0,2	0/0:33,0:33:93.31:0,93,1701	1/1:0,17:17:45.15:663,45,0	0/0:23,0:23:69.24:0,69,1293	0/0:25,0:25:75.26:0,75,1397	0/0:19,0:19:57.20:0,57,1068	0/0:10,0:10:30.10:0,30,561	0/0:13,0:13:36.12:0,36,663	0/0:21,0:21:57.20:0,57,1059	1/1:1,27:28:75.25:1105,75,0	0/0:26,0:26:78.26:0,78,1429	0/0:27,0:27:81.28:0,81,1511	0/0:11,0:11:33.11:0,33,615
chr10	17822669	.	TC	T	5574.65	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=17.012;DP=671;FS=2.761;HRun=6;HaplotypeScore=77.1718;InbreedingCoeff=0.9831;MQ=86.88;MQ0=0;MQRankSum=-2.140;QD=28.30;ReadPosRankSum=2.114;VQSLOD=5.6319;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:56:99:0,144,1878	1/1:0,9:9:24.06:258,24,0	0/0:26,0:26:57.26:0,57,842	0/0:31,0:31:55.28:0,55,788	1/1:1,33:34:93.23:997,93,0	0/0:21,0:21:57.17:0,57,736	0/0:26,0:26:72.21:0,72,914	0/0:32,0:32:81.26:0,81,1053	1/1:1,19:20:54.14:580,54,0	1/1:1,21:22:63.16:677,63,0	1/1:2,15:17:39.10:419,39,0	0/0:26,0:26:78.25:0,78,1025	0/0:26,0:26:78.24:0,78,1011	0/0:18,0:18:51.14:0,51,639	0/0:23,0:23:66.21:0,66,868	0/0:30,0:30:87.28:0,87,1143	1/1:6,36:42:99:1129,105,0	0/0:17,0:17:48.16:0,48,628	0/0:18,0:18:48.15:0,48,619	0/0:21,0:21:63.19:0,63,814	0/0:37,0:37:99:0,111,1452	0/0:12,0:12:36.12:0,36,474	0/0:15,0:15:42.14:0,42,553	0/0:23,0:23:66.17:0,66,849	0/0:16,0:16:45.14:0,45,585	1/1:1,26:27:75.19:806,75,0	1/1:1,21:22:60.15:644,60,0	1/1:1,3:4:6.02:64,6,0
chr10	17824599	.	T	TCCC	5035.99	PASS	AB=0.534;AC=41;AF=0.732;AN=56;BaseQRankSum=6.648;DP=621;FS=0.524;HRun=8;HaplotypeScore=133.6415;InbreedingCoeff=0.6818;MQ=77.78;MQ0=0;MQRankSum=-4.592;QD=10.54;ReadPosRankSum=6.544;VQSLOD=0.7027;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,0:30:27.05:59,27,0	1/1:0,5:5:9.03:172,9,0	0/0:20,0:20:48.54:0,49,562	0/0:22,0:22:46.05:0,46,604	1/1:8,19:27:51.09:946,51,0	0/1:3,0:23:16.48:20,0,16	0/1:6,0:34:3.84:41,0,4	0/0:29,0:29:72.16:0,72,903	1/1:4,13:18:30.09:551,30,0	1/1:12,9:24:42.10:692,42,0	1/1:2,6:10:18.04:304,18,0	1/1:2,0:25:16.49:44,16,0	1/1:1,0:18:22.61:54,23,0	1/1:4,0:26:23.67:51,24,0	1/1:1,0:27:27.25:59,27,0	1/1:1,0:17:17.44:38,17,0	1/1:3,16:19:39.12:728,39,0	1/1:3,0:31:1.06:31,1,0	0/0:25,0:25:63.14:0,63,810	0/0:28,0:28:72.22:0,72,945	0/0:19,0:19:48.12:0,48,629	0/1:2,0:26:20.67:26,0,21	1/1:4,0:22:17.11:38,17,0	1/1:3,0:33:32.39:70,32,0	1/1:2,0:26:25.80:56,26,0	1/1:5,8:13:15.03:235,15,0	1/1:3,12:16:32.77:645,33,0	1/1:5,3:8:4.91:176,5,0
chr10	17825631	.	AGTC	A	18241.02	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=16.643;DP=791;FS=0.858;HRun=0;HaplotypeScore=133.2197;InbreedingCoeff=0.9997;MQ=78.41;MQ0=0;MQRankSum=-3.487;QD=44.27;ReadPosRankSum=6.097;VQSLOD=6.3522;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,135,3190	1/1:0,12:12:27.09:476,27,0	0/0:23,0:23:69.10:0,69,1479	0/0:15,0:15:39.13:0,39,877	1/1:3,29:32:51.46:900,51,0	1/1:1,25:26:57.20:1005,57,0	1/1:1,49:50:99:2169,123,0	0/0:30,0:30:90.31:0,90,2052	1/1:0,34:34:84.29:1481,84,0	1/1:1,32:33:96.33:1687,96,0	1/1:0,23:23:54.19:952,54,0	0/0:27,0:27:81.28:0,81,1903	0/0:26,0:26:75.26:0,75,1732	0/0:25,0:25:75.22:0,75,1669	1/1:0,43:43:99:2167,123,0	1/1:0,32:32:90.31:1587,90,0	1/1:0,28:28:66.23:1161,66,0	1/1:1,26:27:69.24:1217,69,0	0/0:13,0:13:39.13:0,39,891	0/0:21,0:21:54.19:0,54,1275	0/0:53,0:53:99:0,151,3378	0/0:34,0:34:99:0,102,2378	0/0:17,0:17:48.16:0,48,1134	0/0:47,0:47:99:0,141,3189	1/1:0,14:14:33.11:582,33,0	1/1:0,25:25:75.26:1323,75,0	1/1:1,22:23:57.20:1005,57,0	1/1:0,10:10:30.10:529,30,0
chr10	17826344	.	T	TCTTCCTTCCTTT	7393.77	PASS	AB=0.981;AC=27;AF=0.482;AN=56;BaseQRankSum=-6.087;DP=669;FS=13.473;HRun=0;HaplotypeScore=250.2337;InbreedingCoeff=-0.5289;MQ=37.52;MQ0=56;MQRankSum=-2.102;QD=11.87;ReadPosRankSum=-4.244;VQSLOD=1.5377;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:32,0:22:32.86:470,33,0	0/1:10,0:9:99:157,0,152	0/0:7,0:3:7.69:0,8,45	0/0:6,0:5:11.71:0,12,174	0/1:26,0:23:99:239,0,381	0/1:21,0:18:99:836,0,121	0/1:22,0:15:74.22:361,0,74	0/1:37,0:32:18.22:74,0,18	0/0:16,0:12:17.52:0,18,245	0/1:30,0:28:99:146,0,398	0/1:24,0:23:99:224,0,388	0/1:16,0:13:11.20:241,0,11	0/1:16,0:14:69.58:286,0,70	1/1:13,0:9:1.34:165,1,0	0/1:18,0:16:26.81:794,0,27	0/1:15,11:21:28.32:143,0,28	0/1:33,0:27:76.50:77,0,329	0/1:23,0:17:77.89:414,0,78	0/1:21,0:15:12.28:12,0,278	0/1:30,0:27:52.63:53,0,443	0/1:24,0:17:66.15:66,0,247	1/1:27,0:25:27.82:425,28,0	0/1:34,0:31:7.27:621,0,7	0/1:33,0:25:57.34:292,0,57	0/1:48,0:43:99:1047,0,346	0/1:23,0:18:96.13:96,0,407	0/1:33,0:28:99:155,0,539	0/0:17,0:13:15.16:0,15,180
chr10	17826345	.	CT	C	192	PASS	AB=0.841;AC=11;AF=0.196;AN=56;BaseQRankSum=4.748;DP=662;FS=3.198;HRun=3;HaplotypeScore=164.8596;InbreedingCoeff=-0.2263;MQ=36.76;MQ0=59;MQRankSum=0.096;QD=0.76;ReadPosRankSum=5.383;VQSLOD=0.0359;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:22:43.75:0,44,385	0/1:5,4:8:35.93:36,0,58	0/1:7,0:3:1.93:2,0,75	0/0:5,0:4:12.04:0,12,168	0/1:17,8:22:26.75:27,0,152	0/0:22,0:18:44.20:0,44,395	0/0:23,0:15:29.01:0,29,259	0/0:37,0:32:46.08:0,46,422	0/1:17,0:12:0.74:1,0,64	0/1:22,8:28:41.24:41,0,154	0/1:18,6:23:11.31:11,0,204	0/0:15,0:12:6.90:0,7,215	0/0:16,0:14:39.84:0,40,347	0/0:13,0:9:23.84:0,24,184	0/0:19,0:16:28.08:0,28,284	0/0:27,0:21:8.62:0,9,91	0/1:30,2:26:5.25:5,0,353	0/0:23,0:17:26.89:0,27,264	0/0:16,2:12:7.90:0,8,78	0/1:19,10:26:10.46:10,0,230	0/1:22,0:15:34.65:35,0,131	0/0:27,0:25:21.61:0,22,195	0/0:34,0:31:46.08:0,46,367	0/0:34,0:26:47:0,47,391	0/0:48,0:43:49.07:0,49,707	0/1:15,8:18:63.37:69,0,63	0/1:24,9:28:89.04:89,0,126	0/0:16,1:13:11.70:0,12,133
chr10	17826349	.	CTTTCTTT	C	4789.47	PASS	AB=0.920;AC=19;AF=0.339;AN=56;BaseQRankSum=0.590;DP=655;FS=7.915;HRun=0;HaplotypeScore=197.1711;InbreedingCoeff=0.2835;MQ=35.70;MQ0=62;MQRankSum=-2.494;QD=14.78;ReadPosRankSum=7.144;VQSLOD=2.6379;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:20:43.45:0,43,492	1/1:5,4:8:21.93:334,22,0	0/0:6,0:3:9.02:0,9,96	0/0:4,0:3:9:0,9,81	0/1:15,8:20:3.79:443,0,4	0/0:22,0:18:43.50:0,43,671	0/0:24,0:15:12.04:0,12,424	0/1:37,0:32:99:106,0,210	0/1:17,0:11:3.87:265,0,4	1/1:22,8:28:24.20:641,24,0	1/1:17,6:22:17.43:542,17,0	0/1:14,0:11:26.69:27,0,216	0/0:16,0:14:37.83:0,38,415	0/0:14,0:10:9.16:0,9,235	0/0:21,0:18:30.53:0,31,319	0/0:28,0:22:9.01:0,9,127	0/1:31,2:27:99:349,0,256	0/0:19,0:13:31.45:0,31,398	0/1:16,0:12:30.54:102,0,31	0/1:21,0:28:31.70:241,0,32	0/1:17,0:10:80.37:80,0,102	0/0:29,0:26:28.86:0,29,397	0/0:32,0:29:44.61:0,45,703	0/0:37,0:28:31.01:0,31,536	0/0:48,0:43:79.54:0,80,1185	1/1:16,8:19:6.18:671,6,0	1/1:24,9:28:13.64:860,14,0	0/1:14,1:11:25.01:128,0,25
chr10	17826384	.	CCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTT	C	3975	PASS	AB=0.914;AC=22;AF=0.423;AN=52;BaseQRankSum=0.569;DP=659;FS=1.091;HRun=0;HaplotypeScore=457.2708;InbreedingCoeff=-0.3361;MQ=31.22;MQ0=75;MQRankSum=-3.909;QD=8.60;ReadPosRankSum=1.907;VQSLOD=0.8524;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:14:18.60:246,0,19	0/1:10,0:9:99:311,0,223	./.	./.	0/1:19,0:16:78.36:138,0,78	0/0:22,0:18:27.06:0,27,419	0/0:28,0:13:8.87:0,9,79	1/1:26,0:21:0.81:153,1,0	0/1:24,0:17:47.44:47,0,356	0/1:16,0:30:99:317,0,100	0/1:11,0:23:38.76:156,0,39	0/0:11,0:7:9.03:0,9,390	0/1:21,0:19:99:752,0,549	0/1:12,0:8:99:163,0,544	0/0:29,0:25:25.33:0,25,977	0/1:27,0:21:20.85:21,0,822	0/1:31,0:25:87.32:87,0,561	0/1:23,0:14:36.66:37,0,220	1/1:13,0:9:6.91:215,7,0	1/1:20,14:30:21.05:411,21,0	0/1:16,0:9:99:130,0,408	0/1:13,21:31:9.96:10,0,113	0/0:19,28:43:24.83:0,25,692	0/1:40,0:27:99:314,0,902	0/0:49,0:43:67.20:0,67,1176	0/1:15,0:21:57.67:221,0,58	0/1:24,0:18:10.25:248,0,10	0/0:11,0:7:4.36:0,4,24
chr10	17826403	.	TTC	T	1045.65	PASS	AB=0.933;AC=14;AF=0.269;AN=52;BaseQRankSum=2.559;DP=595;FS=5.040;HRun=0;HaplotypeScore=172.7080;InbreedingCoeff=-0.2345;MQ=31.42;MQ0=74;MQRankSum=-5.022;QD=4.04;ReadPosRankSum=-1.011;VQSLOD=2.7531;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,3:12:18.01:0,18,212	0/1:10,0:9:93.88:94,0,154	./.	./.	0/1:17,0:14:62.74:63,0,135	0/0:20,0:17:39.12:0,39,505	0/0:18,0:6:9:0,9,95	1/1:7,3:5:4.44:119,4,0	0/0:22,0:15:36.11:0,36,464	0/1:31,0:28:99:172,0,284	0/1:20,0:19:99:111,0,154	0/0:11,2:9:18.06:0,18,239	0/1:18,4:19:99:159,0,431	0/1:10,3:8:24.18:24,0,218	0/0:33,0:28:47.05:0,47,555	0/0:26,0:20:23.15:0,23,337	0/0:30,0:24:56.88:0,57,660	0/0:24,0:15:33.03:0,33,371	0/1:9,4:8:43.77:71,0,44	0/1:22,4:22:57.73:121,0,58	0/1:17,0:10:21.24:21,0,214	0/0:30,0:27:5.69:0,6,52	0/0:41,0:37:23.94:0,24,284	0/1:32,4:23:52.08:52,0,434	0/0:46,0:41:72.24:0,72,1003	0/1:21,0:17:99:126,0,255	0/1:23,0:17:63.72:64,0,304	0/0:10,0:7:7.83:0,8,73
chr10	17826411	.	TTC	T	870.10	PASS	AB=0.851;AC=11;AF=0.212;AN=52;BaseQRankSum=3.849;DP=581;FS=8.593;HRun=0;HaplotypeScore=165.9449;InbreedingCoeff=-0.1738;MQ=33.03;MQ0=72;MQRankSum=-6.015;QD=3.88;ReadPosRankSum=-2.809;VQSLOD=1.6283;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:12:21.06:0,21,260	0/1:4,6:9:99:194,0,119	./.	./.	0/1:14,5:16:99:107,0,205	0/0:19,0:16:28.58:0,29,514	0/0:21,0:9:15.03:0,15,171	1/1:9,0:2:1.77:4,2,0	0/0:23,0:16:39.12:0,39,493	0/1:25,6:28:99:258,0,321	0/1:15,3:18:77.55:78,0,169	0/0:14,0:10:24.04:0,24,287	0/1:22,0:19:46.74:47,0,437	0/0:13,0:8:4.58:0,5,221	0/0:29,0:24:39.26:0,39,596	0/0:25,0:20:26.16:0,26,422	0/1:30,2:26:55.95:56,0,641	0/0:21,0:16:33.02:0,33,395	0/0:9,0:4:6.46:0,6,54	0/0:23,0:19:10.07:0,10,89	0/0:17,0:11:5.95:0,6,252	0/0:30,0:27:4.22:0,4,24	0/0:37,0:33:18.02:0,18,218	0/1:36,1:25:10.09:10,0,488	0/0:43,0:39:69.23:0,69,1042	0/1:17,3:16:99:143,0,214	0/1:18,8:20:99:110,0,403	0/0:10,0:7:6.02:0,6,68
chr10	17828088	.	CAAA	C	6287.10	PASS	AB=0.605;AC=36;AF=0.643;AN=56;BaseQRankSum=-2.005;DP=548;FS=7.914;HRun=14;HaplotypeScore=111.1969;InbreedingCoeff=0.5260;MQ=68.50;MQ0=3;MQRankSum=-5.058;QD=15.08;ReadPosRankSum=4.348;VQSLOD=3.3636;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,16:24:22.17:468,22,0	1/1:5,4:9:12:140,12,0	0/0:18,0:10:16.67:0,17,191	0/1:21,0:10:8.83:9,0,107	1/1:2,19:20:45.10:525,45,0	0/1:3,3:22:37.50:38,0,77	0/1:3,2:18:11.45:49,0,11	0/0:28,0:31:72.11:0,72,1101	0/0:9,0:10:25.33:0,25,454	1/1:6,17:23:48.07:561,48,0	1/1:1,12:13:30.03:351,30,0	1/1:1,12:16:36.34:432,36,0	1/1:4,12:16:29.98:335,30,0	1/1:7,9:17:32.92:347,33,0	0/1:4,2:25:12.26:77,0,12	0/0:3,0:15:11.68:0,12,25	1/1:5,17:23:39.38:564,39,0	0/1:5,5:27:48.35:134,0,48	0/0:18,0:21:57.14:0,57,901	0/0:23,0:28:70.40:0,70,1084	0/0:6,0:7:19.31:0,19,333	1/1:3,8:11:14.97:175,15,0	1/1:4,12:19:23.95:293,24,0	1/1:3,22:29:61.49:682,61,0	0/1:0,4:27:42.46:66,0,42	1/1:7,16:25:42.08:520,42,0	1/1:3,13:17:34.65:418,35,0	1/1:3,7:11:7.55:102,8,0
chr10	17828224	.	TC	T	4655.20	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=9.440;DP=669;FS=13.381;HRun=5;HaplotypeScore=88.6420;InbreedingCoeff=0.9973;MQ=66.23;MQ0=7;MQRankSum=-1.050;QD=28.21;ReadPosRankSum=2.277;VQSLOD=3.9963;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,28:29:66.19:747,66,0	0/0:7,0:7:18.06:0,18,246	0/0:37,0:26:21.70:0,22,339	0/0:63,0:29:26.99:0,27,556	0/0:22,0:22:66.20:0,66,884	0/0:20,0:20:57.17:0,57,757	0/0:20,0:20:54.16:0,54,715	0/0:34,0:34:81.25:0,81,1075	0/0:20,0:20:60.19:0,60,803	0/0:23,0:23:66.21:0,66,885	0/0:16,0:16:48.16:0,48,656	1/1:1,26:27:72.21:816,72,0	1/1:1,17:18:51.14:577,51,0	1/1:1,21:22:54.15:611,54,0	0/0:27,0:26:75.20:0,75,997	0/0:22,0:22:60.20:0,60,818	0/0:26,0:26:68.21:0,68,934	0/0:15,0:15:35.77:0,36,491	0/0:20,0:19:54.18:0,54,728	0/0:22,0:22:60.19:0,60,803	0/0:28,1:29:58.88:0,59,1028	1/1:3,24:27:66.19:748,66,0	1/1:1,10:11:24.07:272,24,0	1/1:3,28:31:78.22:885,78,0	0/0:19,0:19:54.18:0,54,738	0/0:25,0:25:72.24:0,72,983	0/0:14,0:14:42.14:0,42,574	0/0:18,0:18:45.09:0,45,576
chr10	17828403	.	T	TCTTCTCCTCCTC	15507.94	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=8.174;DP=650;FS=2.388;HRun=0;HaplotypeScore=213.6153;InbreedingCoeff=0.8717;MQ=60.14;MQ0=13;MQRankSum=-10.995;QD=37.46;ReadPosRankSum=3.700;VQSLOD=4.3091;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:42,0:42:95.53:1592,96,0	1/1:9,0:9:15.05:320,15,0	0/0:49,0:28:21.23:0,21,665	0/0:71,0:33:25.11:0,25,498	1/1:10,3:19:17.74:345,18,0	1/1:9,0:9:12.04:606,12,0	1/1:20,0:20:53.81:1210,54,0	0/0:26,0:25:63.20:0,63,1794	0/0:30,0:29:84.07:0,84,2417	1/1:21,0:20:51.17:1379,51,0	1/1:9,0:8:15.04:245,15,0	1/1:24,0:24:39.13:1105,39,0	1/1:22,0:22:21.07:644,21,0	1/1:25,0:25:30.10:913,30,0	1/1:30,0:30:24.08:1309,24,0	1/1:35,0:35:9.03:391,9,0	1/1:21,0:22:7.12:395,7,0	1/1:15,0:15:16.59:657,17,0	0/0:20,0:20:56.98:0,57,1549	0/0:15,0:15:42.14:0,42,1404	0/0:25,0:25:62.81:0,63,1806	1/1:11,0:11:3.01:66,3,0	1/1:13,0:13:9.03:195,9,0	1/1:32,0:32:68.99:1241,69,0	1/1:14,0:14:6.02:311,6,0	1/1:24,0:24:50.82:1636,51,0	1/1:14,0:14:36.05:787,36,0	1/1:4,0:4:3.01:162,3,0
chr10	17828406	.	T	TCTCCTCCTCCTC	18885.64	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=5.959;DP=718;FS=0.391;HRun=0;HaplotypeScore=212.1265;InbreedingCoeff=0.8757;MQ=61.91;MQ0=13;MQRankSum=-11.507;QD=40.35;ReadPosRankSum=3.766;VQSLOD=3.9212;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:31,0:42:84.29:2004,84,0	1/1:9,0:9:18.05:439,18,0	0/0:54,0:29:16.55:0,17,867	0/0:73,0:35:24.97:0,25,642	1/1:16,1:17:17.59:451,18,0	1/1:0,9:13:12.04:680,12,0	1/1:21,0:21:56.74:1481,57,0	0/0:26,0:25:69.22:0,69,2074	0/0:32,0:31:87.07:0,87,2525	1/1:20,1:20:51.18:1721,51,0	1/1:11,0:10:18.06:461,18,0	1/1:4,0:31:39.13:1196,39,0	1/1:2,0:24:21.07:690,21,0	1/1:0,0:30:30.10:982,30,0	1/1:1,26:35:24.08:1459,24,0	1/1:4,24:40:6.02:361,6,0	1/1:5,13:25:14.98:650,15,0	1/1:2,9:18:14.92:748,15,0	0/0:20,0:20:56.98:0,57,1764	0/0:16,0:16:45.14:0,45,1517	0/0:26,0:26:65.84:0,66,2024	1/1:2,0:14:3.01:73,3,0	1/1:1,0:16:9.03:222,9,0	1/1:24,0:32:69.07:1463,69,0	1/1:3,9:20:6.02:351,6,0	1/1:2,21:29:66.17:2299,66,0	1/1:13,0:13:39.01:974,39,0	1/1:0,4:7:3.01:183,3,0
chr10	17828409	.	CCTTCTCTGT	C	4784.05	PASS	AB=0.983;AC=20;AF=0.357;AN=56;BaseQRankSum=6.949;DP=712;FS=3.342;HRun=0;HaplotypeScore=231.6494;InbreedingCoeff=-0.3503;MQ=63.06;MQ0=12;MQRankSum=-8.661;QD=12.24;ReadPosRankSum=4.056;VQSLOD=3.7535;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:37,3:40:99:959,0,1001	0/1:8,0:8:79.17:154,0,79	0/0:54,0:32:46.37:0,46,1506	0/0:80,0:40:52.70:0,53,1389	0/1:16,0:16:99:214,0,458	0/1:13,0:13:14.10:40,0,14	0/1:24,0:24:99:320,0,619	0/0:28,0:27:75.25:0,75,2893	0/0:34,0:33:99:0,99,4126	0/1:20,0:19:99:350,0,303	0/1:12,0:11:99:139,0,378	0/1:30,0:30:99:212,0,245	1/1:22,0:22:0.51:163,1,0	0/1:29,0:29:99:130,0,344	0/1:33,0:33:42.18:42,0,205	0/0:31,0:31:2.89:0,3,316	0/1:22,0:22:20:20,0,505	0/0:18,0:18:17.98:0,18,370	0/0:21,0:21:59.99:0,60,2491	0/0:17,0:17:48.16:0,48,2083	0/0:25,0:25:69.22:0,69,3027	0/1:14,0:14:99:100,0,158	0/1:17,0:17:99:138,0,255	0/1:24,8:32:99:1049,0,521	1/1:16,0:16:5.85:51,6,0	0/1:29,0:29:99:522,0,683	0/1:14,0:14:99:181,0,396	0/0:9,0:9:1.30:0,1,191
chr10	17828413	.	CTCTGT	C	2608.75	PASS	AB=0.913;AC=20;AF=0.357;AN=56;BaseQRankSum=7.159;DP=721;FS=4.559;HRun=0;HaplotypeScore=205.0000;InbreedingCoeff=-0.2963;MQ=64.19;MQ0=12;MQRankSum=-8.626;QD=6.65;ReadPosRankSum=2.114;VQSLOD=2.5284;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:37,0:37:99:209,0,1384	0/1:4,4:8:79.74:202,0,80	0/0:64,0:34:64.41:0,64,1436	0/0:83,0:40:31.92:0,32,1272	0/1:10,6:16:99:167,0,490	1/1:13,0:13:2.52:79,3,0	0/1:21,5:26:99:280,0,956	0/0:24,0:24:72.25:0,72,2342	0/0:33,0:33:99:0,99,3247	0/1:14,8:21:99:399,0,549	0/1:10,2:11:94.14:94,0,402	0/1:31,0:31:9.18:9,0,868	0/1:22,0:22:6.87:7,0,420	0/0:29,0:29:36:0,36,733	0/1:34,0:34:70.80:71,0,330	0/1:30,0:30:16.49:16,0,365	0/1:21,0:21:69.18:69,0,519	0/0:18,0:18:16.23:0,16,518	0/0:21,0:21:63.19:0,63,1976	0/0:18,0:18:51.18:0,51,1659	0/0:26,0:26:72.23:0,72,2302	0/1:15,0:15:17:17,0,224	0/1:17,0:17:27.85:28,0,326	0/1:28,0:30:99:297,0,690	1/1:14,0:14:6.02:88,6,0	0/1:30,0:30:99:556,0,935	0/1:10,4:14:99:184,0,602	0/0:10,0:10:8.67:0,9,269
chr10	17828415	.	CTGT	C	2600.07	PASS	AB=0.950;AC=17;AF=0.304;AN=56;BaseQRankSum=7.650;DP=717;FS=1.912;HRun=0;HaplotypeScore=190.0990;InbreedingCoeff=-0.2861;MQ=64.44;MQ0=11;MQRankSum=-8.844;QD=8.02;ReadPosRankSum=0.493;VQSLOD=3.1392;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:33,1:35:99:349,0,1316	0/1:6,2:8:55.87:204,0,56	0/0:63,0:34:56.34:0,56,1136	0/0:87,0:40:57.81:0,58,1065	0/1:17,0:17:99:211,0,466	0/1:13,0:13:12.35:35,0,12	0/1:24,1:25:99:306,0,886	0/0:25,0:25:75.24:0,75,1738	0/0:33,0:33:99:0,99,2413	0/1:18,3:20:99:377,0,527	0/1:7,3:10:99:159,0,337	0/0:31,0:31:9.27:0,9,826	0/1:23,0:23:1.45:1,0,431	0/0:29,0:29:36:0,36,624	0/1:33,0:33:23.84:24,0,360	0/0:32,0:32:1.69:0,2,356	0/1:22,0:22:34.16:34,0,415	0/0:18,0:18:24.40:0,24,634	0/0:20,0:20:60.21:0,60,1474	0/0:18,0:18:51.18:0,51,1245	0/0:26,0:25:75.21:0,75,1758	0/1:15,0:15:13.66:14,0,201	0/1:17,0:17:9.56:10,0,275	0/1:28,1:29:99:301,0,548	1/1:14,0:14:6.01:63,6,0	0/1:29,0:29:99:500,0,904	0/1:12,1:13:99:170,0,507	0/0:10,0:10:11.78:0,12,231
chr10	17828718	.	A	ACGCG	1517.38	PASS	AB=0.975;AC=28;AF=0.609;AN=46;BaseQRankSum=6.873;DP=504;FS=1.499;HRun=0;HaplotypeScore=150.7511;InbreedingCoeff=0.5271;MQ=57.88;MQ0=2;MQRankSum=-6.376;QD=5.68;ReadPosRankSum=0.982;VQSLOD=2.2955;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	1/1:8,0:8:0.47:1,0,0	0/0:28,0:24:57.12:0,57,872	0/0:22,0:17:27.09:0,27,438	./.	1/1:11,0:11:3.04:48,3,0	1/1:30,1:30:3.95:56,4,0	0/0:16,0:15:33.11:0,33,559	1/1:14,0:14:11.72:77,12,0	1/1:21,0:20:15.05:261,15,0	./.	1/1:21,1:22:6.23:77,6,0	1/1:11,1:12:8.92:94,9,0	1/1:28,0:28:1.92:13,2,0	0/0:5,5:10:0.31:0,0,1	0/1:18,1:19:14.77:15,0,17	1/1:18,0:18:3.41:19,3,0	0/1:22,0:21:24.96:234,0,25	0/0:18,0:17:35.88:0,36,514	0/0:7,0:7:15.05:0,15,251	0/0:42,0:42:84.27:0,84,1388	./.	./.	1/1:24,0:24:0.47:1,0,0	0/0:18,0:18:0.66:0,1,1	1/1:16,0:17:30.07:466,30,0	1/1:19,0:18:17.79:258,18,0	1/1:1,0:1:3.01:51,3,0
chr10	17828722	.	G	GCGCGCA	3083.01	PASS	AB=0.585;AC=31;AF=0.674;AN=46;BaseQRankSum=7.002;DP=504;FS=0.000;HRun=0;HaplotypeScore=144.4731;InbreedingCoeff=0.6185;MQ=48.08;MQ0=7;MQRankSum=-6.749;QD=10.70;ReadPosRankSum=-0.592;VQSLOD=2.4897;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	1/1:1,5:8:0.47:1,0,0	0/0:24,0:20:60.12:0,60,1154	0/0:16,0:11:27.09:0,27,546	./.	1/1:7,4:11:3.33:49,3,0	1/1:12,16:29:15.99:291,16,0	0/0:16,0:14:35.75:0,36,734	1/1:13,0:13:11.57:73,12,0	1/1:2,0:21:19.85:463,20,0	./.	1/1:6,0:26:6.02:145,6,0	1/1:8,2:12:11.93:223,12,0	1/1:17,9:27:2.75:14,3,0	1/1:9,1:10:0.94:1,1,0	0/0:5,0:19:0:0,0,0	1/1:4,0:21:5.38:22,5,0	0/1:7,13:23:31.85:473,0,32	0/0:14,0:13:15.82:0,16,634	0/0:7,0:7:15.05:0,15,309	0/0:42,0:41:63.12:0,63,1707	./.	./.	1/1:4,17:27:0.47:1,0,0	1/1:4,10:15:0.02:0,0,0	1/1:2,9:14:30.08:791,30,0	1/1:5,14:22:20.79:590,21,0	1/1:1,1:2:3.01:99,3,0
chr10	17829945	.	CTCTG	C	1402.64	PASS	AB=0.734;AC=6;AF=0.107;AN=56;BaseQRankSum=6.280;DP=702;FS=2.163;HRun=0;HaplotypeScore=192.7469;InbreedingCoeff=-0.1332;MQ=52.77;MQ0=17;MQRankSum=-5.852;QD=8.88;ReadPosRankSum=-1.171;VQSLOD=2.9537;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:43:92.53:0,93,2351	0/1:10,7:17:65.85:66,0,165	0/0:28,0:6:12.04:0,12,247	0/0:31,0:15:21.03:0,21,362	0/1:15,10:25:25.90:26,0,342	0/0:19,0:19:29.72:0,30,606	0/0:20,0:19:41.56:0,42,686	0/0:44,0:38:99:0,108,2481	0/1:15,8:23:71.30:71,0,373	0/1:23,13:35:99:584,0,753	0/0:9,7:16:5.95:0,6,64	0/0:24,0:24:66.23:0,66,1683	0/0:22,0:22:57.14:0,57,1429	0/0:22,0:22:51.14:0,51,1237	0/0:23,0:23:39.09:0,39,919	0/0:17,0:17:23.38:0,23,517	0/0:12,8:20:3.95:0,4,153	0/0:14,0:14:18.95:0,19,456	0/0:34,0:32:84.21:0,84,1805	0/0:21,0:21:60.21:0,60,1510	0/0:31,0:30:75.22:0,75,1822	0/0:18,0:18:39.13:0,39,1040	0/0:24,0:24:63.20:0,63,1570	0/0:39,0:39:96.25:0,96,2271	0/0:11,0:11:20.59:0,21,397	0/1:21,7:28:99:342,0,667	0/1:17,12:29:99:437,0,669	0/0:22,0:22:32.27:0,32,458
chr10	17829949	.	G	GTCTCTCTGTC	9218.60	PASS	AB=1.000;AC=28;AF=0.500;AN=56;BaseQRankSum=7.520;DP=682;FS=2.292;HRun=0;HaplotypeScore=230.1878;InbreedingCoeff=0.6916;MQ=50.90;MQ0=17;MQRankSum=-5.422;QD=27.19;ReadPosRankSum=3.088;VQSLOD=3.9568;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:94.83:0,95,2379	1/1:14,0:14:18.01:574,18,0	0/1:24,0:5:3.22:3,0,73	0/0:29,0:12:8.66:0,9,86	1/1:24,0:24:11.37:380,11,0	0/1:19,0:19:3.93:34,0,4	1/1:19,0:18:34.65:512,35,0	0/0:42,0:36:78.23:0,78,1520	1/1:23,0:23:15.54:608,16,0	1/1:34,0:33:77.31:2582,77,0	1/1:17,0:17:5.21:123,5,0	0/0:26,0:26:69.20:0,69,1824	0/0:21,0:21:48.13:0,48,1305	0/0:21,0:21:39.04:0,39,1016	1/1:23,0:23:19.70:104,20,0	0/1:17,0:17:12.35:12,0,34	1/1:18,0:19:2.86:15,3,0	0/1:14,0:14:5.34:26,0,5	0/0:32,0:30:62.69:0,63,1337	0/0:22,0:22:57.18:0,57,1545	0/0:29,0:29:57.18:0,57,1525	0/0:17,0:17:38.76:0,39,1117	0/0:23,0:23:57.15:0,57,1542	0/0:36,0:37:78.22:0,78,1948	1/1:11,0:11:11.48:106,11,0	1/1:27,0:27:75.21:2008,75,0	1/1:29,0:29:65.82:1979,66,0	1/1:10,13:25:3.01:153,3,0
chr10	17829959	.	CTCTG	C	1872.21	PASS	AB=0.911;AC=14;AF=0.250;AN=56;BaseQRankSum=5.839;DP=667;FS=3.495;HRun=0;HaplotypeScore=193.0495;InbreedingCoeff=-0.3101;MQ=48.97;MQ0=16;MQRankSum=-0.254;QD=6.18;ReadPosRankSum=-1.373;VQSLOD=2.6926;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:45:99:0,102,2464	0/1:12,2:14:46.35:161,0,46	0/1:16,0:5:3.22:3,0,73	0/1:22,0:8:0.06:0,0,74	0/1:19,6:25:63.12:63,0,129	0/1:17,0:17:12.30:12,0,198	0/1:21,2:22:45.12:320,0,45	0/0:40,0:35:96.31:0,96,2154	0/1:13,7:20:67.34:175,0,67	0/1:32,6:37:99:335,0,791	0/1:18,3:21:37.52:38,0,196	0/0:27,0:27:75.26:0,75,1958	0/0:21,0:21:48.09:0,48,1171	0/0:22,0:21:39.04:0,39,901	0/1:21,1:22:38.51:39,0,122	0/0:17,0:17:5.58:0,6,130	0/0:17,2:19:10.28:0,10,177	0/1:13,0:13:2.69:3,0,95	0/0:29,0:28:72.23:0,72,1522	0/0:21,0:21:60.21:0,60,1531	0/0:29,0:28:63.20:0,63,1567	0/0:18,0:18:39.13:0,39,1042	0/0:23,0:23:63.21:0,63,1565	0/0:36,0:36:93.28:0,93,2235	0/1:13,0:13:23.24:85,0,23	0/1:24,6:30:99:509,0,430	0/1:25,4:29:99:274,0,257	0/0:16,0:16:5.93:0,6,80
chr10	17829965	.	C	CTG	3179.53	PASS	AB=0.892;AC=18;AF=0.321;AN=56;BaseQRankSum=9.971;DP=665;FS=14.911;HRun=0;HaplotypeScore=176.8349;InbreedingCoeff=0.1595;MQ=48.78;MQ0=17;MQRankSum=-1.638;QD=10.71;ReadPosRankSum=3.327;VQSLOD=2.3184;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:48:99:0,102,1493	0/1:16,0:16:99:114,0,124	0/0:9,0:2:3.90:0,4,47	0/0:20,0:4:8.48:0,8,56	0/1:26,0:26:74.34:74,0,138	0/1:3,13:16:44.07:268,0,44	1/1:14,9:22:26.80:594,27,0	0/0:45,0:41:99:0,114,1495	0/1:19,0:19:69.17:119,0,69	0/1:35,2:36:99:271,0,841	0/1:18,4:22:28.43:28,0,246	0/0:30,0:30:81.25:0,81,1197	0/0:20,0:20:42.14:0,42,642	0/0:20,0:19:33.11:0,33,504	1/1:6,16:22:29.76:578,30,0	0/1:4,12:16:3.28:254,0,3	0/0:19,1:20:15.44:0,15,178	1/1:2,10:12:2.20:311,2,0	0/0:29,0:27:72.13:0,72,1002	0/0:22,0:22:60.07:0,60,892	0/0:28,0:27:60.19:0,60,896	0/0:18,0:18:39.13:0,39,595	0/0:22,0:22:63.13:0,63,939	0/0:36,0:36:90.26:0,90,1329	1/1:8,4:12:9.71:140,10,0	0/1:36,0:35:99:397,0,497	0/1:24,0:24:99:201,0,249	0/1:16,0:16:2.66:3,0,41
chr10	17829991	.	CTT	C	461.21	PASS	AB=0.711;AC=4;AF=0.071;AN=56;BaseQRankSum=6.711;DP=681;FS=0.671;HRun=3;HaplotypeScore=190.5797;InbreedingCoeff=-0.0861;MQ=48.54;MQ0=30;MQRankSum=-7.513;QD=7.32;ReadPosRankSum=-0.562;VQSLOD=-0.3171;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,108,1913	0/0:13,2:15:20.57:0,21,464	0/0:33,0:5:15.05:0,15,269	0/0:31,0:6:11.95:0,12,227	0/0:22,5:27:46.12:0,46,703	0/1:11,6:17:99:136,0,151	0/1:8,13:20:99:140,0,185	0/0:40,0:39:99:0,114,2023	0/0:19,4:23:19.74:0,20,485	0/0:33,5:38:39.35:0,39,1485	0/0:20,2:22:33.91:0,34,598	0/0:34,0:34:91.18:0,91,1558	0/0:24,0:24:45.05:0,45,740	0/0:22,0:21:29.93:0,30,455	0/0:11,9:19:26.74:0,27,421	0/1:7,8:15:99:215,0,136	0/0:24,0:24:30.79:0,31,516	0/1:8,2:10:79.79:80,0,252	0/0:25,0:20:57.18:0,57,1064	0/0:27,0:26:71.84:0,72,1101	0/0:22,0:22:65.79:0,66,1027	0/0:19,0:19:44.53:0,45,614	0/0:18,0:18:49.40:0,49,864	0/0:28,0:28:69.23:0,69,1285	0/0:4,9:13:6.46:0,6,117	0/0:25,4:28:20.86:0,21,1212	0/0:23,3:26:9.44:0,9,939	0/0:17,0:17:15.05:0,15,247
chr10	17830029	.	GTCTCTGTC	G	3676.61	PASS	AB=0.996;AC=23;AF=0.411;AN=56;BaseQRankSum=0.877;DP=650;FS=2.389;HRun=0;HaplotypeScore=210.9766;InbreedingCoeff=0.2665;MQ=48.06;MQ0=12;MQRankSum=-1.777;QD=10.66;ReadPosRankSum=0.775;VQSLOD=2.7840;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:29,3:31:43.20:718,43,0	0/0:22,0:22:15.45:0,15,1075	0/0:25,0:4:2.13:0,2,37	0/0:34,0:10:1.68:0,2,75	0/0:25,0:25:34.02:0,34,569	0/1:19,0:19:49.40:56,0,49	1/1:18,0:17:4.54:34,5,0	0/0:52,0:49:94.74:0,95,658	0/1:18,0:18:32.01:32,0,360	0/0:26,0:26:9.31:0,9,1235	0/0:17,0:16:30.42:0,30,637	1/1:25,3:29:53.07:484,53,0	1/1:3,21:27:27.42:556,27,0	1/1:1,24:28:21.07:437,21,0	0/1:20,0:19:18.66:19,0,47	0/1:13,0:13:8.95:59,0,9	0/0:31,0:31:44.64:0,45,1361	0/1:7,0:6:26.36:26,0,29	0/1:24,0:23:99:167,0,169	0/1:22,0:21:99:185,0,109	0/0:17,0:17:23.84:0,24,179	1/1:5,19:24:11.92:173,12,0	1/1:13,2:14:31.22:349,31,0	0/1:28,1:28:10.29:356,0,10	0/1:19,0:18:25.92:26,0,49	0/0:19,0:18:47.95:0,48,607	0/0:22,0:22:54:0,54,1377	0/0:15,0:15:29.86:0,30,789
chr10	17830035	.	GTCTCTCTCTCTCTC	G	1878.50	PASS	AB=0.935;AC=9;AF=0.167;AN=54;BaseQRankSum=3.606;DP=654;FS=0.000;HRun=0;HaplotypeScore=266.5130;InbreedingCoeff=0.7612;MQ=47.74;MQ0=15;MQRankSum=-1.572;QD=13.71;ReadPosRankSum=-0.893;VQSLOD=1.8676;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:34:45.59:0,46,617	0/0:21,0:22:44.22:0,44,1394	./.	0/0:30,0:7:0.47:0,0,1	0/0:26,0:26:11.09:0,11,871	0/0:21,0:21:28.50:0,28,381	0/0:12,0:11:7.97:0,8,77	1/1:34,0:44:32.71:342,33,0	0/0:20,0:20:15.40:0,15,651	0/0:23,0:26:53.15:0,53,1600	0/0:20,0:20:20.99:0,21,685	0/1:27,0:29:16.81:17,0,386	0/0:29,0:29:9.23:0,9,251	0/0:27,0:27:20.26:0,20,219	0/0:22,0:21:16.56:0,17,349	0/0:17,0:17:29.46:0,29,326	0/0:27,0:32:63.24:0,63,1770	0/0:7,0:6:13.60:0,14,282	1/1:13,8:21:29.52:728,30,0	1/1:8,12:19:21.07:744,21,0	1/1:18,0:18:9.03:204,9,0	0/0:25,0:24:11.71:0,12,161	0/0:17,0:16:15.05:0,15,306	0/0:26,0:27:27.09:0,27,616	0/0:22,0:21:12.14:0,12,346	0/0:22,0:21:30.06:0,30,661	0/0:21,0:22:52.53:0,53,1890	0/0:11,0:12:26.96:0,27,1010
chr10	17830039	.	C	CTG	2334.81	PASS	AB=0.992;AC=23;AF=0.411;AN=56;BaseQRankSum=-7.656;DP=680;FS=7.072;HRun=0;HaplotypeScore=177.9161;InbreedingCoeff=-0.1299;MQ=47.52;MQ0=18;MQRankSum=-0.319;QD=4.81;ReadPosRankSum=1.115;VQSLOD=2.6005;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:37,2:38:35.02:35,0,437	0/1:23,0:23:74.68:75,0,76	0/0:21,0:2:3:0,3,29	0/0:34,0:9:16.22:0,16,114	0/1:24,1:25:21.34:160,0,21	0/0:21,0:21:16.61:0,17,102	0/0:14,0:12:9.41:0,9,65	1/1:47,0:43:3.96:418,4,0	0/1:23,0:23:78.71:79,0,227	0/1:29,0:28:2.97:365,0,3	0/1:20,0:19:67.45:95,0,67	0/1:27,1:28:37.39:37,0,292	0/1:30,0:30:70.82:71,0,96	0/1:27,0:27:24.51:25,0,68	0/0:22,0:21:10.26:0,10,71	0/0:21,0:21:14.93:0,15,97	0/1:32,0:32:95.95:96,0,166	0/0:11,0:10:23.55:0,24,157	1/1:21,0:20:28.91:230,29,0	1/1:20,0:19:22.17:167,22,0	1/1:19,0:19:28.41:212,28,0	0/1:26,0:25:35.85:42,0,36	0/1:17,0:16:9.81:10,0,148	0/0:25,1:25:50.27:0,50,397	0/0:23,0:23:16.04:0,16,117	0/1:23,0:22:54.03:237,0,54	0/1:22,0:22:68.38:145,0,68	0/1:14,0:14:11.31:11,0,151
chr10	17830636	.	T	TA	8045.07	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-1.496;DP=616;FS=12.588;HRun=0;HaplotypeScore=104.4466;InbreedingCoeff=0.9888;MQ=82.39;MQ0=0;MQRankSum=-1.968;QD=43.02;ReadPosRankSum=4.249;VQSLOD=3.7849;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,38:40:99:1581,99,0	0/0:12,0:12:30.10:0,30,419	0/0:17,0:17:48.16:0,48,662	0/0:18,0:18:51.12:0,51,661	0/0:21,0:21:63.19:0,63,858	0/0:17,0:17:48.16:0,48,667	0/0:41,0:41:99:0,114,1592	0/0:32,0:32:90.29:0,90,1245	0/0:13,0:13:39.13:0,39,545	0/0:13,0:13:33.11:0,33,461	0/0:11,0:11:33.11:0,33,456	1/1:0,25:25:66.23:1055,66,0	1/1:0,28:28:78.27:1246,78,0	1/1:0,21:21:60.20:959,60,0	0/0:12,0:12:36.12:0,36,492	0/0:9,0:9:27.07:0,27,359	0/0:43,0:43:99:0,129,1803	0/0:28,0:28:84.23:0,84,1135	0/0:17,0:17:51.16:0,51,696	0/0:11,0:11:27.09:0,27,365	0/0:50,0:50:99:0,147,1985	1/1:0,17:17:48.16:767,48,0	1/1:0,16:16:45.15:714,45,0	1/1:1,39:40:99:1723,108,0	0/0:25,0:25:75.25:0,75,1047	0/0:26,0:26:78.26:0,78,1089	0/0:10,0:10:30.10:0,30,419	0/0:3,0:3:9.03:0,9,126
chr10	17830817	.	TC	T	632.82	PASS	AB=0.756;AC=17;AF=0.370;AN=46;BaseQRankSum=5.037;DP=357;FS=2.972;HRun=2;HaplotypeScore=61.1872;InbreedingCoeff=0.2120;MQ=30.05;MQ0=61;MQRankSum=-3.387;QD=5.10;ReadPosRankSum=0.762;VQSLOD=0.7658;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,3:18:1.36:0,1,19	0/0:1,3:4:2.81:0,3,20	0/0:34,0:4:9.50:0,10,116	0/0:41,0:4:8.99:0,9,99	1/1:1,11:11:0.47:1,0,0	1/1:2,7:6:2.98:23,3,0	1/1:1,15:14:3.90:40,4,0	0/0:26,0:23:67.97:0,68,809	0/1:16,0:14:28.08:28,0,51	0/1:11,9:19:99:296,0,135	./.	1/1:3,5:5:2.53:38,3,0	0/0:3,0:3:6.01:0,6,57	0/0:1,2:2:3.48:0,3,30	0/1:4,1:4:0:0,0,0	./.	1/1:7,2:5:5.61:47,6,0	1/1:3,3:3:6.02:76,6,0	0/0:15,0:13:38.05:0,38,407	0/0:9,0:8:2.90:0,3,40	0/0:25,1:22:14.44:0,14,158	./.	./.	0/0:5,3:7:3.89:0,4,34	./.	0/1:3,7:9:60.45:167,0,60	0/1:6,6:9:21.23:49,0,21	0/0:7,1:4:2.69:0,3,8
chr10	17830818	.	C	CT	655.83	PASS	AB=0.931;AC=18;AF=0.375;AN=48;BaseQRankSum=5.328;DP=358;FS=1.753;HRun=1;HaplotypeScore=61.6903;InbreedingCoeff=0.2264;MQ=30.04;MQ0=61;MQRankSum=-4.200;QD=4.82;ReadPosRankSum=-0.544;VQSLOD=0.1474;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:15,7:18:1.09:0,1,18	0/0:4,0:4:2.76:0,3,20	0/0:34,0:4:9.50:0,10,116	0/0:41,0:4:9:0,9,102	1/1:13,0:12:0.47:1,0,0	1/1:9,0:6:2.99:24,3,0	1/1:16,0:14:4.84:42,5,0	0/0:26,0:23:67.97:0,68,811	0/1:16,0:14:32.37:32,0,45	0/1:19,0:18:99:296,0,132	0/1:10,1:11:0:0,0,0	1/1:8,0:5:2.68:38,3,0	0/0:3,0:3:6.01:0,6,56	0/0:3,0:2:3:0,3,29	0/1:2,0:3:0:0,0,0	./.	1/1:10,1:6:7.42:57,7,0	1/1:6,0:3:6.02:76,6,0	0/0:16,0:14:38.65:0,39,420	0/0:9,0:8:2.80:0,3,40	0/0:25,1:22:14.99:0,15,160	./.	./.	0/0:8,0:7:3.48:0,3,33	./.	0/1:10,0:9:59.55:170,0,60	0/1:13,0:10:18.92:53,0,19	0/0:8,0:4:2.69:0,3,8
chr10	17830832	.	T	TCACACACA	152.10	PASS	AB=0.924;AC=7;AF=0.152;AN=46;BaseQRankSum=1.623;DP=324;FS=4.300;HRun=0;HaplotypeScore=82.6544;InbreedingCoeff=0.3378;MQ=30.62;MQ0=48;MQRankSum=-1.029;QD=2.54;ReadPosRankSum=-0.739;VQSLOD=1.2613;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:19,0:16:10.98:11,0,66	0/0:3,0:3:0.89:0,1,2	0/0:35,0:5:9.02:0,9,170	0/0:45,0:6:11.07:0,11,186	0/1:12,0:11:0.01:0,0,0	0/0:9,0:6:1.72:0,2,4	0/0:15,0:14:1.86:0,2,31	0/0:26,0:23:63.22:0,63,1701	0/1:12,4:15:8.74:136,0,9	0/0:12,0:12:31.03:0,31,326	0/0:10,0:10:0.47:0,0,1	1/1:6,0:4:3.01:71,3,0	0/0:3,0:2:2.97:0,3,20	./.	0/0:3,0:3:0:0,0,0	./.	0/0:8,0:6:8.91:0,9,109	0/0:4,0:2:5.93:0,6,53	0/0:13,0:12:36.11:0,36,883	0/0:8,0:8:6.02:0,6,135	0/0:24,0:20:15.71:0,16,433	./.	./.	0/0:9,0:7:0.47:0,0,1	1/1:6,0:5:3.01:36,3,0	0/0:7,0:6:17.52:0,18,208	0/0:11,0:10:14.98:0,15,194	./.
chr10	17830834	.	TTTCACACACACACACACA	T	1588.47	PASS	AB=1.000;AC=15;AF=0.357;AN=42;BaseQRankSum=3.769;DP=309;FS=0.873;HRun=0;HaplotypeScore=91.8996;InbreedingCoeff=0.4694;MQ=31.52;MQ0=44;MQRankSum=-2.784;QD=22.06;ReadPosRankSum=3.777;VQSLOD=1.3003;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:16:2.82:0,3,32	0/0:2,0:2:1.25:0,1,3	0/0:36,0:6:15.52:0,16,616	0/0:45,0:6:3.24:0,3,739	1/1:5,4:10:0.88:1,1,0	0/0:9,0:7:3.01:0,3,195	0/0:15,0:14:6.33:0,6,38	0/0:24,0:22:59.62:0,60,1431	0/1:18,0:16:47.46:47,0,462	1/1:7,2:9:20.33:391,20,0	./.	0/0:7,0:5:6.49:0,6,311	./.	./.	0/1:3,0:3:0:0,0,0	./.	1/1:5,1:6:9.03:383,9,0	0/1:4,0:2:13.97:14,0,91	0/0:12,0:12:19.06:0,19,593	0/0:8,0:8:17.31:0,17,158	0/0:22,0:18:23:0,23,343	./.	./.	./.	0/0:6,0:5:3.01:0,3,195	1/1:4,2:5:14.90:356,15,0	1/1:2,5:9:12.04:516,12,0	1/1:4,1:1:2.97:20,3,0
chr10	17830836	.	TCACACACACA	T	1861.52	PASS	AB=1.000;AC=23;AF=0.479;AN=48;BaseQRankSum=1.812;DP=378;FS=5.964;HRun=0;HaplotypeScore=92.7955;InbreedingCoeff=0.5811;MQ=31.43;MQ0=43;MQRankSum=-2.267;QD=12.84;ReadPosRankSum=3.093;VQSLOD=0.9900;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:20:2.69:0,3,19	./.	0/0:37,0:6:6.02:0,6,302	0/0:47,0:8:15.05:0,15,671	1/1:10,0:10:0.47:1,0,0	0/0:17,0:14:3.48:0,3,129	0/0:22,0:21:4.92:0,5,152	1/1:20,4:22:9.02:273,9,0	0/0:23,0:22:9.96:0,10,333	1/1:9,0:9:6.02:133,6,0	./.	0/0:13,0:11:9.50:0,10,280	0/0:7,0:6:3.01:0,3,80	1/1:8,0:6:0.47:1,0,0	0/1:8,0:8:0:0,0,0	0/0:6,0:6:2.75:0,3,112	1/1:8,0:6:9.03:207,9,0	0/0:4,0:3:6.02:0,6,175	1/1:9,5:13:18.02:457,18,0	1/1:3,6:9:12.04:199,12,0	1/1:15,7:18:12.93:298,13,0	0/1:5,0:3:0:0,0,0	./.	0/1:13,0:11:0:0,0,0	0/0:10,0:9:3:0,3,128	1/1:6,0:5:6.02:137,6,0	1/1:9,0:9:12.04:304,12,0	./.
chr10	17832025	.	TGG	T	3653.90	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=2.645;DP=636;FS=2.973;HRun=10;HaplotypeScore=95.4505;InbreedingCoeff=0.9728;MQ=74.76;MQ0=0;MQRankSum=-1.088;QD=24.86;ReadPosRankSum=6.938;VQSLOD=3.2896;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:75.26:0,75,1183	1/1:1,6:7:18.05:200,18,0	0/0:21,0:20:27.02:0,27,336	0/0:13,0:12:11.18:0,11,193	1/1:2,18:20:57.09:619,57,0	0/0:24,0:27:58.13:0,58,771	0/0:25,0:25:54.13:0,54,753	0/0:32,1:34:5.65:0,6,458	0/0:23,0:25:65.14:0,65,866	1/1:3,16:19:40.98:450,41,0	1/1:5,10:15:30.07:333,30,0	0/0:23,0:25:56.58:0,57,789	0/0:27,0:28:55.95:0,56,703	0/0:22,0:22:54.15:0,54,786	0/0:28,0:28:72.19:0,72,1051	0/0:16,0:19:38.58:0,39,512	1/1:3,31:35:85.88:965,86,0	0/0:24,0:27:73.33:0,73,937	0/0:20,0:22:47.07:0,47,590	0/0:17,0:17:36.06:0,36,476	0/0:29,0:31:67.65:0,68,901	0/0:11,0:19:24:0,24,251	0/0:17,0:19:35.59:0,36,503	0/0:24,0:24:66.21:0,66,997	0/0:21,0:23:38.10:0,38,520	1/1:6,12:19:23.96:318,24,0	1/1:0,16:16:42.11:468,42,0	1/1:5,11:16:27.06:301,27,0
chr10	17832879	.	T	TC	3210.94	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=5.209;DP=477;FS=12.483;HRun=0;HaplotypeScore=118.5553;InbreedingCoeff=0.9527;MQ=50.56;MQ0=10;MQRankSum=-0.780;QD=13.21;ReadPosRankSum=4.790;VQSLOD=4.6365;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:15,3:18:29.74:186,30,0	0/0:9,0:9:20.98:0,21,184	0/0:19,0:7:12.30:0,12,121	0/0:10,0:6:2.18:0,2,36	0/0:18,0:18:30.13:0,30,222	1/1:11,5:16:26.49:278,26,0	1/1:15,6:21:53.34:387,53,0	0/0:38,0:35:79.53:0,80,590	1/1:10,0:10:16.18:104,16,0	0/0:18,0:18:34.87:0,35,299	0/0:9,0:9:21.81:0,22,167	1/1:19,4:24:48.82:300,49,0	1/1:10,1:11:17.34:113,17,0	1/1:16,1:18:20.54:175,21,0	1/1:9,10:19:50.24:394,50,0	1/1:11,5:16:28.55:241,29,0	0/0:21,0:21:30.86:0,31,236	1/1:13,10:20:38.05:324,38,0	0/0:25,0:25:68.85:0,69,508	0/0:16,0:15:30.22:0,30,219	0/0:9,0:9:14.11:0,14,101	1/1:10,3:14:33.73:234,34,0	1/1:15,0:15:34.57:220,35,0	1/1:12,4:17:33.23:212,33,0	1/1:14,4:18:28.75:271,29,0	0/0:17,0:17:47.66:0,48,388	0/0:18,0:18:35.63:0,36,303	0/0:7,0:5:8.84:0,9,72
chr10	17832880	.	T	TTCTTC	1294.58	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=3.809;DP=489;FS=15.523;HRun=0;HaplotypeScore=175.4139;InbreedingCoeff=0.4751;MQ=47.25;MQ0=10;MQRankSum=-0.687;QD=5.99;ReadPosRankSum=1.349;VQSLOD=1.8523;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:19,2:21:7.45:170,7,0	0/0:9,0:9:21.07:0,21,370	0/0:18,0:6:8.94:0,9,104	0/0:9,0:5:5.81:0,6,32	0/0:18,0:18:27.87:0,28,356	0/1:16,0:16:1.04:1,0,138	0/1:23,0:22:1.62:2,0,236	0/0:37,0:34:49.37:0,49,770	0/1:10,0:10:5.42:5,0,113	0/0:18,0:18:11.16:0,11,506	0/0:11,0:11:24.22:0,24,305	1/1:24,1:25:17.98:400,18,0	0/1:12,0:12:22.31:67,0,22	1/1:17,1:18:18.08:294,18,0	0/1:19,0:19:39.13:39,0,108	0/0:16,0:16:14.70:0,15,200	0/0:21,0:21:34.85:0,35,468	0/0:24,0:21:15.52:0,16,211	0/0:25,0:25:56.46:0,56,657	0/0:16,0:15:32.70:0,33,332	0/0:8,0:8:16.64:0,17,130	1/1:15,0:15:27.97:158,28,0	0/1:18,0:18:2.13:144,0,2	1/1:18,2:19:18.13:184,18,0	0/1:18,0:18:5.96:6,0,91	0/0:17,0:17:48.94:0,49,706	0/0:19,0:19:35.19:0,35,454	0/0:7,0:5:10.85:0,11,151
chr10	17832881	.	T	TCTTC	908.41	PASS	AB=0.977;AC=14;AF=0.250;AN=56;BaseQRankSum=3.564;DP=489;FS=21.831;HRun=0;HaplotypeScore=161.8691;InbreedingCoeff=0.0123;MQ=45.97;MQ0=11;MQRankSum=-1.071;QD=4.15;ReadPosRankSum=2.967;VQSLOD=1.0049;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:21,1:22:69.53:102,0,70	0/0:9,0:9:21.02:0,21,358	0/0:18,0:5:9.01:0,9,113	0/0:9,0:5:5.81:0,6,32	0/0:18,0:18:37.99:0,38,402	0/1:16,0:16:2.16:2,0,112	0/1:22,0:22:1.39:1,0,194	0/0:34,0:31:56.68:0,57,868	0/1:10,0:10:1.45:1,0,86	0/0:17,0:18:28.77:0,29,520	0/0:11,0:11:24.31:0,24,307	0/1:25,1:26:38.52:274,0,39	0/1:11,1:12:42:64,0,42	0/1:18,0:18:32.93:187,0,33	0/1:19,0:19:3.75:4,0,74	0/0:14,0:15:16.77:0,17,182	0/0:23,0:23:38.72:0,39,495	0/0:24,0:21:27.32:0,27,183	0/0:23,0:23:68.93:0,69,781	0/0:16,0:15:32.18:0,32,335	0/0:8,0:8:19.26:0,19,146	1/1:14,1:15:3.60:97,4,0	0/1:18,0:18:28.66:122,0,29	1/1:20,2:21:3.38:185,3,0	0/1:17,0:17:8.42:8,0,68	0/0:17,0:17:49.64:0,50,687	0/0:20,0:20:35.22:0,35,464	0/0:7,0:5:11.29:0,11,156
chr10	17833803	.	GC	G	3913.58	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=8.129;DP=688;FS=3.957;HRun=5;HaplotypeScore=117.2940;InbreedingCoeff=0.9998;MQ=78.65;MQ0=0;MQRankSum=-2.416;QD=29.21;ReadPosRankSum=2.954;VQSLOD=3.0842;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,111,1517	0/0:14,0:14:33.11:0,33,450	0/0:16,0:16:45.05:0,45,542	0/0:14,0:14:30.02:0,30,332	0/0:25,0:25:75.15:0,75,985	1/1:3,14:17:39.11:442,39,0	1/1:1,17:18:45.13:510,45,0	0/0:41,0:41:99:0,117,1552	0/0:20,0:20:57.14:0,57,727	0/0:30,0:30:90.28:0,90,1193	0/0:22,0:22:63.20:0,63,846	0/0:25,0:25:72.24:0,72,985	0/0:22,0:22:66.17:0,66,866	0/0:33,0:33:90.28:0,90,1210	1/1:0,22:22:54.15:613,54,0	1/1:2,28:30:78.22:885,78,0	0/0:32,0:32:96.30:0,96,1294	1/1:1,17:18:51.14:579,51,0	0/0:20,0:20:60.16:0,60,786	0/0:20,0:20:60.20:0,60,819	0/0:27,0:27:78.25:0,78,1049	0/0:25,0:25:69.22:0,69,928	0/0:21,0:21:57.19:0,57,779	0/0:41,0:41:99:0,120,1569	1/1:0,29:29:78.22:885,78,0	0/0:23,0:23:63.21:0,63,860	0/0:30,0:30:87.25:0,87,1140	0/0:12,0:12:36.12:0,36,490
chr10	17834326	.	G	GTTATTA	1803.64	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=3.358;DP=423;FS=19.861;HRun=0;HaplotypeScore=129.0454;InbreedingCoeff=0.8894;MQ=60.37;MQ0=4;MQRankSum=-6.337;QD=24.71;ReadPosRankSum=-2.692;VQSLOD=1.7092;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:18,7:25:39.62:895,40,0	0/0:7,0:7:21.07:0,21,445	0/0:18,0:13:33.03:0,33,538	0/0:14,0:12:35.51:0,36,600	0/0:24,0:24:66.23:0,66,1421	0/0:15,0:15:39.12:0,39,791	0/0:12,0:12:30.10:0,30,652	0/0:29,0:29:77.72:0,78,1444	1/1:5,0:5:2.46:33,2,0	0/0:15,0:15:41.16:0,41,754	0/0:16,0:16:36.04:0,36,743	1/1:6,0:6:8.42:103,8,0	1/1:2,4:6:9.03:295,9,0	1/1:9,1:10:8.24:214,8,0	0/0:18,0:18:44.65:0,45,876	0/0:5,0:5:15.05:0,15,329	0/0:35,0:35:99:0,102,2155	0/0:33,0:33:85.79:0,86,1725	0/0:18,0:16:48.08:0,48,904	0/0:11,0:11:29.62:0,30,603	0/0:16,0:16:42.11:0,42,809	1/1:2,0:2:2.84:25,3,0	1/1:0,7:9:12.04:334,12,0	1/1:10,0:10:14.26:90,14,0	0/0:18,0:17:53.98:0,54,1016	0/0:15,0:15:45.14:0,45,970	0/0:15,0:15:42.13:0,42,835	0/0:15,0:15:33.05:0,33,598
chr10	17834419	.	A	AT	4249.01	PASS	AB=0.889;AC=29;AF=0.518;AN=56;BaseQRankSum=4.444;DP=365;FS=1.446;HRun=6;HaplotypeScore=45.1821;InbreedingCoeff=0.8488;MQ=72.89;MQ0=1;MQRankSum=-0.248;QD=27.24;ReadPosRankSum=2.856;VQSLOD=5.1038;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,27:28:66.21:830,66,0	0/0:4,0:4:12.02:0,12,117	0/0:9,0:8:11.47:0,11,174	0/1:7,1:6:20.22:20,0,75	0/0:21,0:21:60.14:0,60,612	1/1:2,18:20:39.12:491,39,0	1/1:0,7:7:12.04:151,12,0	0/0:35,0:35:87.18:0,87,883	1/1:0,9:9:24.08:302,24,0	0/0:10,0:10:24.05:0,24,245	0/0:6,0:6:18.04:0,18,184	1/1:0,7:7:21.07:264,21,0	1/1:0,3:3:9.03:113,9,0	1/1:0,7:7:18.04:212,18,0	1/1:1,5:6:12.04:151,12,0	1/1:0,4:4:12.04:151,12,0	0/0:39,0:39:99:0,108,1091	1/1:2,26:28:69.22:868,69,0	0/0:20,0:20:57.12:0,57,575	0/0:9,0:9:24.05:0,24,244	0/0:4,0:4:12.03:0,12,122	1/1:1,2:3:5.93:55,6,0	1/1:0,3:3:3.01:38,3,0	1/1:0,5:5:12.04:151,12,0	1/1:4,14:18:36.12:453,36,0	0/0:22,0:22:60.11:0,60,604	0/0:23,0:22:63.14:0,63,641	0/0:7,0:7:21.05:0,21,214
chr10	17835981	.	GA	G	1038.47	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-6.958;DP=694;FS=2.443;HRun=1;HaplotypeScore=171.6484;InbreedingCoeff=0.7146;MQ=82.71;MQ0=0;MQRankSum=-2.097;QD=38.46;ReadPosRankSum=-6.498;VQSLOD=1.3807;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:67.45:0,67,604	0/0:9,0:9:22.69:0,23,132	0/0:26,0:26:66.23:0,66,1092	0/0:18,0:18:21.69:0,22,650	0/0:26,0:26:21.61:0,22,332	0/0:19,0:19:35.49:0,35,281	0/0:34,0:34:43.66:0,44,430	0/0:29,0:29:76.66:0,77,420	1/1:0,27:27:81.27:1133,81,0	0/0:20,0:20:2.30:0,2,252	0/0:15,0:15:40.88:0,41,247	0/0:31,0:31:90.32:0,90,532	0/0:20,0:20:58.43:0,58,348	0/0:29,0:29:61.93:0,62,453	0/0:28,0:28:55.80:0,56,397	0/0:17,1:18:10.59:0,11,251	0/0:36,0:36:37.67:0,38,515	0/0:26,0:26:68.60:0,69,405	0/0:29,0:29:50.39:0,50,392	0/0:29,0:29:81.50:0,81,517	0/0:26,0:26:51.03:0,51,399	0/0:13,0:13:9.32:0,9,159	0/0:16,0:16:46.73:0,47,276	0/0:29,0:29:7.25:0,7,337	0/0:27,0:27:72.18:0,72,414	0/0:30,0:30:54.06:0,54,424	0/0:28,0:28:76.33:0,76,473	0/0:11,0:11:19.31:0,19,136
chr10	17836189	.	G	GT	3992.41	PASS	AB=0.945;AC=27;AF=0.482;AN=56;BaseQRankSum=-4.405;DP=519;FS=32.280;HRun=9;HaplotypeScore=126.1156;InbreedingCoeff=0.6067;MQ=57.89;MQ0=10;MQRankSum=-1.042;QD=13.67;ReadPosRankSum=-2.423;VQSLOD=0.9219;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,1:31:16.88:0,17,384	1/1:5,5:10:12.47:121,12,0	0/1:25,0:13:5.46:5,0,176	0/1:19,0:9:6.28:6,0,72	1/1:12,11:23:36.59:325,37,0	0/0:18,0:18:26.70:0,27,232	0/0:23,0:23:38.97:0,39,336	1/1:15,17:33:0.02:496,0,0	0/0:17,0:17:23.97:0,24,203	1/1:12,14:26:31.03:543,31,0	1/1:11,11:21:22.48:445,22,0	0/0:17,0:16:6.01:0,6,138	0/1:11,0:11:2.40:2,0,132	0/0:17,0:17:0.23:0,0,199	0/0:24,0:24:32.95:0,33,280	0/0:25,0:25:59.93:0,60,512	0/1:13,8:20:42.53:220,0,43	0/0:12,0:12:20.99:0,21,181	1/1:12,18:26:34.07:586,34,0	1/1:7,8:16:12.61:321,13,0	1/1:2,4:6:12.03:133,12,0	0/0:12,0:12:19.20:0,19,160	0/1:14,0:14:4.92:5,0,132	0/0:9,0:9:12:0,12,104	0/0:20,0:20:32.80:0,33,281	1/1:5,11:16:39.02:404,39,0	1/1:5,8:13:23.82:226,24,0	1/1:2,4:6:14.77:152,15,0
chr10	17836210	.	TG	T	971.87	PASS	AB=0.993;AC=19;AF=0.339;AN=56;BaseQRankSum=-4.446;DP=499;FS=4.878;HRun=1;HaplotypeScore=110.9215;InbreedingCoeff=0.5580;MQ=49.90;MQ0=13;MQRankSum=-3.755;QD=5.04;ReadPosRankSum=-2.783;VQSLOD=-0.4565;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:29,2:29:79.28:441,79,0	0/0:11,0:10:24.62:0,25,126	0/1:27,1:9:14.25:14,0,89	0/1:27,0:11:9.01:9,0,39	0/0:26,0:25:18.68:0,19,183	0/0:14,0:14:20.36:0,20,123	0/0:23,0:23:29.05:0,29,189	0/1:28,0:27:15.15:15,0,305	0/0:16,0:16:18.21:0,18,90	0/0:29,0:28:55.28:0,55,417	0/0:22,0:21:3.26:0,3,194	1/1:13,2:14:21.13:164,21,0	1/1:10,0:10:17.23:72,17,0	1/1:11,0:11:28.12:158,28,0	0/0:22,0:22:29.09:0,29,175	0/0:27,0:27:55.13:0,55,320	0/0:17,0:16:30.55:0,31,198	0/0:14,0:14:23.38:0,23,151	0/0:30,0:25:44.52:0,45,375	0/0:18,0:18:2.57:0,3,178	0/0:1,0:1:2.99:0,3,23	1/1:4,2:6:17.31:107,17,0	1/1:10,1:11:22.22:112,22,0	1/1:9,0:9:11.36:59,11,0	0/0:22,0:22:32:0,32,192	0/0:14,0:14:33.93:0,34,261	0/1:12,0:12:3.70:4,0,142	0/1:5,0:5:9.32:9,0,81
chr10	17836211	.	G	GTTTTTTGTT	10995.56	PASS	AB=0.983;AC=34;AF=0.607;AN=56;BaseQRankSum=-6.108;DP=514;FS=8.795;HRun=0;HaplotypeScore=137.2094;InbreedingCoeff=0.4374;MQ=52.52;MQ0=13;MQRankSum=-3.433;QD=29.17;ReadPosRankSum=4.214;VQSLOD=3.9199;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:31,0:29:99:151,0,193	1/1:3,6:11:17.63:511,18,0	0/0:27,0:10:16.60:0,17,197	0/0:28,0:12:4.47:0,4,139	1/1:10,10:31:42.27:1038,42,0	1/1:14,0:14:15.03:603,15,0	1/1:22,0:22:14.99:585,15,0	0/1:24,0:26:51.42:51,0,248	0/0:3,0:16:7.02:0,7,50	1/1:12,15:32:64.91:1080,65,0	1/1:12,6:23:47.05:965,47,0	0/1:15,0:14:32.03:32,0,76	0/0:10,0:10:8.52:0,9,105	0/1:11,0:11:31.75:32,0,156	1/1:22,0:22:21.04:847,21,0	1/1:27,0:27:20.39:1786,20,0	1/1:7,8:18:28.98:647,29,0	1/1:14,0:14:18.01:472,18,0	0/0:20,0:25:9.72:0,10,336	0/0:8,0:18:11.33:0,11,238	0/0:1,0:1:0:0,0,0	0/0:6,0:6:11.11:0,11,76	0/1:11,0:11:26.23:26,0,77	0/1:9,0:9:27.51:104,0,28	1/1:22,0:22:24.07:967,24,0	1/1:11,1:14:29.69:521,30,0	1/1:10,0:13:30.09:388,30,0	1/1:4,0:5:14.94:190,15,0
chr10	17836216	.	T	TTGTTTTTTG	13217.95	PASS	AB=1.000;AC=35;AF=0.648;AN=54;BaseQRankSum=-2.154;DP=487;FS=7.454;HRun=0;HaplotypeScore=155.4886;InbreedingCoeff=0.3075;MQ=57.03;MQ0=13;MQRankSum=-6.297;QD=38.31;ReadPosRankSum=7.727;VQSLOD=3.4330;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:27:99:153,0,180	1/1:12,0:11:0.93:558,1,0	0/0:28,0:10:29.45:0,29,332	0/0:30,0:14:0.74:0,1,149	1/1:30,0:29:0.41:1011,0,0	1/1:2,5:12:15.03:691,15,0	1/1:3,12:22:15:672,15,0	0/0:24,0:23:39.38:0,39,511	0/0:15,0:15:15.42:0,15,166	1/1:29,0:28:23.53:1259,24,0	1/1:21,0:20:44.50:970,44,0	0/1:13,0:12:99:141,0,135	0/1:10,0:10:25.73:26,0,99	0/1:11,0:11:63.42:317,0,63	1/1:1,14:22:21.05:969,21,0	1/1:2,20:26:20.28:2050,20,0	1/1:19,0:18:33.06:780,33,0	1/1:1,2:16:18.06:596,18,0	0/0:28,0:23:54.76:0,55,592	0/0:17,0:17:44.80:0,45,460	./.	0/1:6,0:6:66.03:68,0,66	0/1:9,0:9:25.02:25,0,105	0/1:7,0:7:7.96:86,0,8	1/1:0,13:21:24.08:1108,24,0	1/1:13,0:13:35.87:854,36,0	1/1:12,0:12:5.14:574,5,0	1/1:5,0:5:11.77:308,12,0
chr10	17836217	.	T	TG	1158.39	PASS	AB=0.976;AC=23;AF=0.426;AN=54;BaseQRankSum=4.746;DP=451;FS=4.108;HRun=0;HaplotypeScore=112.2619;InbreedingCoeff=0.6039;MQ=57.44;MQ0=13;MQRankSum=-5.302;QD=5.15;ReadPosRankSum=5.536;VQSLOD=2.8964;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:65.30:0,65,428	1/1:11,0:10:19.76:78,20,0	0/0:28,0:10:29.51:0,30,267	0/0:30,0:14:14.12:0,14,163	0/1:30,0:29:58.38:61,0,58	1/1:5,1:6:13.64:62,14,0	1/1:13,0:13:13.46:57,13,0	0/0:23,0:22:34.29:0,34,265	0/0:15,0:15:14.36:0,14,90	0/1:27,0:27:99:149,0,104	0/1:19,2:20:7.26:177,0,7	0/0:12,0:11:29.43:0,29,222	0/0:10,0:10:19.30:0,19,133	0/0:11,0:11:32.21:0,32,227	1/1:13,0:13:18.75:78,19,0	1/1:22,0:22:15.41:140,15,0	1/1:20,0:19:12.62:112,13,0	1/1:16,0:16:16.38:71,16,0	0/0:26,0:21:21.76:0,22,224	0/0:17,0:17:14.66:0,15,151	./.	0/0:7,0:7:16.91:0,17,116	0/0:10,0:10:17.67:0,18,136	0/0:8,0:8:11.40:0,11,69	1/1:15,0:15:21.43:89,21,0	1/1:12,1:13:9.63:147,10,0	0/1:12,0:12:27.85:83,0,28	0/1:5,0:5:7.68:58,0,8
chr10	17836392	.	CA	C	4508.75	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=11.050;DP=579;FS=2.851;HRun=1;HaplotypeScore=60.7211;InbreedingCoeff=0.9923;MQ=82.19;MQ0=0;MQRankSum=0.377;QD=37.26;ReadPosRankSum=2.611;VQSLOD=5.4218;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,105,1652	1/1:0,7:7:21.07:293,21,0	0/0:14,0:14:42.10:0,42,589	0/0:20,0:20:56.29:0,56,751	1/1:0,6:6:18.06:251,18,0	0/0:16,0:16:45.15:0,45,716	0/0:34,0:34:99:0,99,1499	0/0:24,0:24:72.24:0,72,1131	0/0:19,0:19:51.17:0,51,810	1/1:0,23:23:66.22:909,66,0	1/1:0,12:12:30.06:396,30,0	0/0:20,0:19:54.17:0,54,833	0/0:19,0:19:51.11:0,51,783	0/0:21,0:21:63.15:0,63,975	0/0:27,0:27:81.21:0,81,1240	0/0:24,0:24:72.16:0,72,1071	1/1:0,35:35:87.29:1213,87,0	0/0:15,0:15:45.10:0,45,647	0/0:18,0:18:54.18:0,54,863	0/0:13,0:13:39.13:0,39,623	0/0:56,0:56:99:0,162,2420	0/0:19,0:19:57.19:0,57,910	0/0:8,0:8:24.07:0,24,360	0/0:32,0:32:93.32:0,93,1479	0/0:23,0:23:69.24:0,69,1099	1/1:0,21:21:63.20:862,63,0	1/1:0,13:13:30.10:417,30,0	1/1:0,4:4:12.04:167,12,0
chr10	17837515	.	GCA	G	976.61	PASS	AB=0.757;AC=23;AF=0.523;AN=44;BaseQRankSum=1.983;DP=573;FS=2.687;HRun=0;HaplotypeScore=110.6109;InbreedingCoeff=0.3249;MQ=65.86;MQ0=12;MQRankSum=2.476;QD=3.44;ReadPosRankSum=3.181;VQSLOD=2.5211;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:23,7:30:26.13:26,0,39	0/0:10,0:10:6.01:0,6,69	./.	./.	0/0:12,0:12:3:0,3,26	1/1:17,0:16:8.28:38,8,0	./.	./.	0/1:18,1:19:78.11:78,0,92	0/0:28,0:28:44.80:0,45,397	1/1:5,0:5:0.47:1,0,0	1/1:14,7:22:14.86:136,15,0	0/1:10,19:31:18.54:174,0,19	0/1:7,7:14:4.99:86,0,5	1/1:23,0:23:14.20:70,14,0	1/1:22,0:22:14.20:70,14,0	0/0:26,0:25:12.05:0,12,77	1/1:18,0:18:2.84:14,3,0	./.	1/1:16,0:16:2.37:8,2,0	0/0:45,0:43:1.55:0,2,4	0/1:11,2:16:14.66:168,0,15	1/1:9,5:14:7.26:69,7,0	1/1:20,14:36:20.72:191,21,0	./.	0/0:19,0:21:20.97:0,21,187	0/0:8,0:12:8.93:0,9,66	0/0:7,0:7:4.83:0,5,61
chr10	17837538	.	CACACACACACACACACACACAT	C	2794.51	PASS	AB=0.919;AC=12;AF=0.214;AN=56;BaseQRankSum=3.269;DP=623;FS=8.111;HRun=0;HaplotypeScore=275.6891;InbreedingCoeff=0.4882;MQ=51.33;MQ0=20;MQRankSum=-3.338;QD=13.70;ReadPosRankSum=0.457;VQSLOD=0.4893;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:36.11:0,36,1491	0/0:10,0:10:18.06:0,18,1270	0/0:15,0:5:11.94:0,12,172	0/0:26,0:14:15.03:0,15,340	0/0:21,0:20:36.52:0,37,1525	0/1:11,7:17:6.61:397,0,7	1/1:24,0:24:14.96:215,15,0	0/0:13,0:12:5.01:0,5,249	0/0:24,0:25:61.45:0,61,3599	0/0:36,0:36:99:0,104,6115	0/0:9,0:9:2.24:0,2,173	0/0:20,0:18:29.88:0,30,1486	0/0:31,0:31:52.12:0,52,3062	0/0:16,0:16:30.10:0,30,1495	1/1:8,18:25:14.62:867,15,0	1/1:10,15:25:15.05:887,15,0	0/0:25,0:24:59.66:0,60,3276	0/1:20,1:21:99:373,0,113	0/0:11,0:10:20.30:0,20,228	0/1:20,0:19:19.16:65,0,19	0/1:49,0:45:25.68:26,0,447	0/0:26,0:26:63.22:0,63,4323	0/0:16,0:16:24.08:0,24,1707	0/0:39,0:38:63.20:0,63,4051	1/1:7,14:21:3.22:129,3,0	0/0:26,0:25:61.48:0,61,3517	0/0:17,0:16:27.09:0,27,1380	0/0:7,0:7:18.06:0,18,1285
chr10	17837542	.	CACACACACACACACACAT	C	2969.42	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=-0.566;DP=632;FS=14.462;HRun=0;HaplotypeScore=244.7668;InbreedingCoeff=0.7682;MQ=51.41;MQ0=21;MQRankSum=-0.775;QD=12.53;ReadPosRankSum=-3.263;VQSLOD=0.4572;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:35.99:0,36,966	0/0:10,0:10:18.04:0,18,959	0/0:15,0:7:11.88:0,12,100	0/0:25,0:13:6.95:0,7,171	0/0:21,0:20:33.47:0,33,1030	1/1:17,1:17:8.61:405,9,0	1/1:30,0:30:23.89:208,24,0	1/1:15,0:14:20.95:176,21,0	0/0:24,0:24:58.02:0,58,2584	0/0:36,0:36:99:0,100,4553	0/0:9,0:9:2.18:0,2,124	0/0:21,0:19:26.99:0,27,1102	0/0:34,0:34:57.46:0,57,2244	0/0:16,0:16:32.83:0,33,1037	1/1:26,0:25:14.91:650,15,0	1/1:24,0:24:15.05:650,15,0	0/0:26,0:25:56.47:0,56,2420	0/1:25,0:25:45.82:362,0,46	1/1:11,0:10:3.54:85,4,0	1/1:8,10:17:2.30:142,2,0	1/1:53,0:49:41.80:406,42,0	0/0:27,0:27:66.21:0,66,3240	0/0:15,0:15:24.08:0,24,1283	0/0:39,0:38:63.15:0,63,3051	1/1:17,0:17:2.73:81,3,0	0/0:27,0:26:60.71:0,61,2599	0/0:15,0:14:26.95:0,27,899	0/0:7,0:7:18.06:0,18,986
chr10	17838742	.	T	TCA	29165.81	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-4.557;DP=665;FS=6.397;HRun=0;HaplotypeScore=88.8422;InbreedingCoeff=0.9446;MQ=82.24;MQ0=8;MQRankSum=-10.011;QD=47.19;ReadPosRankSum=5.433;VQSLOD=6.2419;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,34:37:84.29:1572,84,0	1/1:1,14:15:42.14:780,42,0	0/0:23,0:23:54.13:0,54,764	0/0:24,0:24:50.36:0,50,786	1/1:1,17:18:42.14:785,42,0	1/1:1,29:31:87.30:1623,87,0	1/1:1,25:27:63.22:1180,63,0	1/1:3,27:31:81.26:1485,81,0	1/1:0,33:34:93.32:1739,93,0	1/1:2,19:21:57.20:1068,57,0	1/1:2,7:9:18.06:337,18,0	1/1:0,26:27:75.26:1399,75,0	1/1:2,19:20:57.19:1044,57,0	1/1:1,24:24:66.23:1236,66,0	1/1:5,17:22:51.17:954,51,0	1/1:3,19:22:54.19:1007,54,0	1/1:3,20:23:57.20:1065,57,0	1/1:0,21:23:57.20:1062,57,0	1/1:1,15:17:45.10:805,45,0	1/1:1,15:16:48.16:876,48,0	1/1:2,40:42:99:2017,108,0	1/1:2,15:18:42.14:786,42,0	1/1:0,12:13:36.12:673,36,0	1/1:3,43:42:96.33:1797,96,0	1/1:1,20:21:60.21:1124,60,0	1/1:3,22:26:66.22:1206,66,0	1/1:0,27:29:78.27:1433,78,0	1/1:0,2:2:6.02:112,6,0
chr10	17839067	.	TCA	T	842.70	PASS	AB=0.732;AC=11;AF=0.212;AN=52;BaseQRankSum=-1.877;DP=642;FS=5.082;HRun=0;HaplotypeScore=126.0513;InbreedingCoeff=0.6280;MQ=68.25;MQ0=5;MQRankSum=1.397;QD=6.43;ReadPosRankSum=2.765;VQSLOD=2.9897;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:38:8.89:0,9,78	0/0:10,0:10:6.02:0,6,78	./.	0/0:30,0:25:0:0,0,0	0/0:17,0:17:12.02:0,12,136	1/1:16,3:16:3.01:33,3,0	1/1:11,8:19:15.04:164,15,0	0/0:25,0:24:12.85:0,13,120	0/0:27,0:27:14.96:0,15,139	0/0:23,0:23:25.26:0,25,266	0/0:20,0:20:21:0,21,216	0/0:33,0:32:12.01:0,12,118	0/0:17,0:17:5.93:0,6,40	0/0:29,0:29:9:0,9,92	1/1:12,12:24:26.96:295,27,0	0/1:19,10:30:17.95:217,0,18	0/0:10,0:24:27.01:0,27,250	1/1:11,5:18:14.71:126,15,0	0/0:17,0:17:21.04:0,21,229	0/0:18,0:18:6.02:0,6,82	0/0:28,0:28:15.02:0,15,164	0/0:26,0:24:2.98:0,3,26	0/0:23,0:23:6.02:0,6,83	0/0:27,0:25:2.74:0,3,42	1/1:13,8:21:15.04:164,15,0	0/0:23,0:23:30.49:0,30,310	0/0:15,0:27:24.46:0,24,208	./.
chr10	17839371	.	TACACACACACACACACACACAC	T	6816.26	PASS	AB=0.815;AC=15;AF=0.268;AN=56;BaseQRankSum=8.095;DP=548;FS=11.929;HRun=0;HaplotypeScore=277.5785;InbreedingCoeff=0.5501;MQ=61.77;MQ0=8;MQRankSum=-8.818;QD=33.74;ReadPosRankSum=2.411;VQSLOD=2.2046;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:24,14:39:16.62:1330,17,0	0/0:3,0:3:6.02:0,6,266	0/0:31,0:17:4.45:0,4,116	0/0:40,0:20:3.01:0,3,119	0/0:9,0:12:12.04:0,12,534	0/0:10,0:11:18.06:0,18,1622	0/0:20,0:20:42.13:0,42,2810	0/0:24,0:23:18.03:0,18,353	0/1:20,0:28:99:106,0,237	0/0:17,0:17:21.07:0,21,1168	0/0:8,0:8:6.02:0,6,380	1/1:11,15:27:45.15:2593,45,0	1/1:6,13:19:16.17:1042,16,0	1/1:14,4:18:12.03:697,12,0	0/0:24,0:24:36.11:0,36,2846	0/0:10,0:14:12.04:0,12,1167	0/0:15,0:21:25.38:0,25,2104	0/0:11,0:15:27.09:0,27,2134	0/0:13,0:16:17.27:0,17,355	0/1:14,0:16:36.36:36,0,546	0/0:34,0:33:18.06:0,18,522	1/1:11,5:17:9.03:502,9,0	0/1:10,4:14:54.16:336,0,54	1/1:19,4:23:2.90:174,3,0	0/0:13,0:13:6.02:0,6,538	0/0:18,0:18:30.10:0,30,1587	0/0:11,0:17:27.09:0,27,1429	0/0:6,0:5:6.02:0,6,380
chr10	17840345	.	CCTGCCTGTCTGT	C	1253.15	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=3.450;DP=423;FS=5.909;HRun=0;HaplotypeScore=146.7557;InbreedingCoeff=0.8957;MQ=60.49;MQ0=2;MQRankSum=-3.675;QD=21.24;ReadPosRankSum=0.070;VQSLOD=2.1144;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:72.25:0,72,3216	0/0:6,0:6:12.04:0,12,659	0/0:11,0:9:21.52:0,22,846	0/0:13,0:11:28.34:0,28,1132	0/0:12,0:12:29.70:0,30,996	1/1:4,7:11:12.04:289,12,0	1/1:3,17:20:2.61:36,3,0	0/0:23,0:23:50.81:0,51,2133	0/0:13,0:13:17.78:0,18,594	0/0:22,0:22:57.19:0,57,2571	0/0:12,0:11:14.99:0,15,686	0/0:15,0:15:39.10:0,39,1722	0/0:16,0:16:24.08:0,24,1099	0/0:11,0:11:30.10:0,30,1418	1/1:2,3:5:12.04:337,12,0	1/1:6,0:6:8.96:102,9,0	0/0:24,0:24:42.14:0,42,2109	1/1:11,2:12:18.06:530,18,0	0/0:22,0:22:60.15:0,60,2504	0/0:11,0:11:30.10:0,30,1164	0/0:18,0:18:45.14:0,45,1925	0/0:16,0:16:42.13:0,42,1800	0/0:15,0:15:27.09:0,27,1267	0/0:27,0:26:45.15:0,45,2242	1/1:4,0:4:5.95:125,6,0	0/0:27,0:26:75.25:0,75,3232	0/0:6,0:6:18.06:0,18,935	0/0:11,0:11:27.09:0,27,1256
chr10	17840355	.	TGTCTGCC	T	592.26	PASS	AB=0.861;AC=7;AF=0.125;AN=56;BaseQRankSum=4.504;DP=411;FS=0.960;HRun=0;HaplotypeScore=108.6687;InbreedingCoeff=0.2875;MQ=62.44;MQ0=4;MQRankSum=-2.564;QD=16.45;ReadPosRankSum=-0.831;VQSLOD=2.9479;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:75.26:0,75,2802	0/0:7,0:7:15.05:0,15,559	0/0:18,0:11:25.62:0,26,764	0/0:19,0:14:38.90:0,39,1070	0/0:13,0:13:29.81:0,30,927	0/1:7,1:8:22.32:107,0,22	0/0:17,0:17:4.21:0,4,23	0/0:22,0:22:59.85:0,60,2037	0/0:12,0:12:20.76:0,21,614	0/0:21,0:21:63.21:0,63,2186	0/0:10,0:9:14.96:0,15,560	0/0:13,0:13:39.10:0,39,1352	0/0:11,0:11:27.09:0,27,950	0/0:11,0:11:33.11:0,33,1114	0/1:6,0:7:60.50:175,0,61	1/1:1,3:4:2.72:23,3,0	0/0:20,0:20:45.02:0,45,1821	1/1:7,1:7:1.11:323,1,0	0/0:26,0:26:78:0,78,2587	0/0:12,0:12:33.11:0,33,1081	0/0:16,0:16:48.08:0,48,1557	0/0:16,0:16:48.15:0,48,1618	0/0:13,0:13:30.06:0,30,1031	0/0:24,0:23:54.19:0,54,2012	0/1:7,2:9:83.90:84,0,145	0/0:28,0:27:81.27:0,81,2805	0/0:7,0:7:21.07:0,21,756	0/0:10,0:10:27.09:0,27,1013
chr10	17840376	.	C	CTTT	2236.42	PASS	AB=0.879;AC=30;AF=0.536;AN=56;BaseQRankSum=2.995;DP=587;FS=3.547;HRun=15;HaplotypeScore=128.5036;InbreedingCoeff=0.1575;MQ=49.61;MQ0=19;MQRankSum=-6.998;QD=5.26;ReadPosRankSum=-3.992;VQSLOD=-0.4299;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:22.40:0,22,309	0/1:6,9:15:14.10:47,0,14	0/1:23,0:9:13.18:23,0,13	0/1:19,0:9:18.67:19,0,22	1/1:28,0:28:41.61:299,42,0	0/1:11,0:13:18.20:18,0,33	0/1:24,0:22:35.82:36,0,37	0/1:31,0:32:30.05:30,0,230	0/1:3,0:12:0.91:1,0,14	1/1:27,1:31:53.48:472,53,0	1/1:16,1:19:37.92:267,38,0	0/1:17,0:17:0.95:1,0,82	0/1:11,0:13:27.53:28,0,60	0/0:15,0:15:5.15:0,5,56	0/1:10,0:12:9.24:9,0,18	1/1:9,0:9:16.27:75,16,0	1/1:28,1:25:27.31:220,27,0	0/1:14,0:16:8.94:11,0,9	0/0:25,0:30:2.32:0,2,188	0/0:7,0:13:10.36:0,10,86	0/0:9,0:8:4.79:0,5,33	0/0:20,0:19:15.12:0,15,238	0/1:17,0:17:7.06:7,0,126	0/0:31,0:32:31.72:0,32,280	1/1:15,0:20:5.21:62,5,0	1/1:29,2:31:51.33:364,51,0	1/1:14,0:14:27.45:194,27,0	1/1:15,2:15:25.91:234,26,0
chr10	17840395	.	C	CT	877.72	PASS	AB=0.920;AC=13;AF=0.241;AN=54;BaseQRankSum=1.728;DP=608;FS=5.443;HRun=9;HaplotypeScore=99.8526;InbreedingCoeff=0.6806;MQ=40.61;MQ0=44;MQRankSum=-2.545;QD=5.97;ReadPosRankSum=0.068;VQSLOD=1.3087;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,1:34:20.94:0,21,338	0/0:15,0:15:17.99:0,18,156	./.	0/0:8,0:3:3:0,3,25	0/0:29,0:27:10.58:0,11,206	1/1:7,7:14:7.57:213,8,0	0/1:16,5:17:8.32:126,0,8	0/0:33,0:31:50.57:0,51,425	0/1:17,0:13:0:0,0,0	0/0:28,0:28:17.05:0,17,243	0/0:20,0:19:11.27:0,11,97	0/1:19,0:20:9.66:10,0,173	0/0:21,0:17:20.58:0,21,180	0/0:15,0:14:20.72:0,21,181	1/1:7,6:13:15.04:166,15,0	1/1:11,3:10:17.85:159,18,0	0/0:31,0:26:37.75:0,38,336	1/1:14,11:21:5.38:41,5,0	0/0:27,0:24:53.77:0,54,468	0/0:15,0:14:26.82:0,27,231	0/0:7,0:5:8.99:0,9,78	0/0:27,0:24:32.90:0,33,278	0/0:19,0:17:38.92:0,39,336	0/0:37,0:35:47.01:0,47,414	1/1:12,11:21:31.32:328,31,0	0/0:38,0:33:36.86:0,37,334	0/0:18,0:17:28.22:0,28,277	0/0:21,0:16:20.81:0,21,175
chr10	17841598	.	AG	A	6768.37	PASS	AB=0.962;AC=28;AF=0.500;AN=56;BaseQRankSum=14.165;DP=651;FS=10.279;HRun=9;HaplotypeScore=123.7025;InbreedingCoeff=0.8562;MQ=73.46;MQ0=0;MQRankSum=-0.345;QD=21.15;ReadPosRankSum=-0.297;VQSLOD=3.5681;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,1:38:59.69:0,60,880	1/1:3,7:10:17.99:160,18,0	0/1:13,0:13:22.17:22,0,173	0/1:11,1:12:31.90:32,0,123	1/1:0,18:18:51.02:467,51,0	0/0:14,0:14:33.06:0,33,366	0/0:27,0:27:66.20:0,66,762	1/1:4,21:25:62.97:575,63,0	1/1:1,25:26:63.03:577,63,0	1/1:7,22:29:63.02:576,63,0	1/1:1,13:14:36.02:330,36,0	0/0:24,0:24:54.16:0,54,623	0/0:32,0:32:87.23:0,87,985	0/0:29,0:30:63.02:0,63,703	0/0:32,0:32:84.25:0,84,969	0/0:20,1:20:48.14:0,48,554	1/1:3,35:38:99:961,105,0	0/0:17,0:17:42.12:0,42,485	1/1:4,14:18:42.01:384,42,0	1/1:1,16:17:48.01:439,48,0	1/1:7,37:44:99:1011,111,0	0/0:27,0:27:54.14:0,54,611	0/0:19,0:19:33.09:0,33,372	0/0:31,0:31:87.25:0,87,994	0/0:19,0:19:36.08:0,36,397	1/1:4,25:29:72.03:659,72,0	1/1:1,14:15:36.02:329,36,0	1/1:2,10:12:27.01:247,27,0
chr10	17842115	.	T	TGG	9673.96	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-12.821;DP=499;FS=27.154;HRun=1;HaplotypeScore=66.3336;InbreedingCoeff=0.9926;MQ=85.24;MQ0=0;MQRankSum=-3.222;QD=45.42;ReadPosRankSum=1.327;VQSLOD=3.4543;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:60.20:0,60,914	1/1:3,8:11:24.08:464,24,0	0/0:26,0:25:69.19:0,69,943	0/0:24,0:24:69.18:0,69,988	1/1:0,8:8:21.07:406,21,0	0/0:14,0:14:33.10:0,33,484	0/0:19,0:19:54.18:0,54,827	1/1:1,17:18:51.17:973,51,0	1/1:3,11:14:36.09:658,36,0	1/1:5,10:16:33.04:597,33,0	1/1:1,7:8:18.06:348,18,0	0/0:19,0:19:54.16:0,54,782	0/0:21,0:21:63.21:0,63,964	0/0:19,0:19:54.16:0,54,776	0/0:18,0:17:54.18:0,54,827	0/0:18,0:18:54.17:0,54,805	1/1:3,34:37:99:1910,99,0	0/0:31,0:30:90.31:0,90,1378	1/1:1,15:15:45.15:869,45,0	1/1:2,7:9:12.04:232,12,0	1/1:6,32:38:71.66:1390,72,0	0/0:10,0:10:27.09:0,27,414	0/0:11,0:11:20.31:0,20,320	0/0:17,0:17:45.15:0,45,687	0/0:15,0:15:42.14:0,42,639	1/1:1,10:11:33.11:619,33,0	1/1:2,16:18:39.13:744,39,0	1/1:0,9:9:24.08:464,24,0
chr10	17842669	.	G	GA	6057.51	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=7.571;DP=741;FS=4.213;HRun=0;HaplotypeScore=116.5105;InbreedingCoeff=0.9994;MQ=82.04;MQ0=0;MQRankSum=-1.345;QD=43.58;ReadPosRankSum=-1.866;VQSLOD=3.7921;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:42:99:0,126,1709	0/0:8,0:8:24.07:0,24,318	0/0:26,0:26:75.21:0,75,977	0/0:22,0:21:54.18:0,54,745	0/0:13,0:13:33.09:0,33,432	0/0:22,0:22:66.20:0,66,905	0/0:40,0:40:99:0,117,1541	1/1:1,22:23:63.21:982,63,0	1/1:3,22:25:66.22:1051,66,0	0/0:22,0:22:66.19:0,66,903	0/0:15,0:15:45.14:0,45,612	0/0:41,0:41:99:0,123,1670	0/0:28,0:28:81.27:0,81,1127	0/0:32,0:32:96.22:0,96,1252	0/0:33,0:33:99:0,99,1369	0/0:18,0:18:54.18:0,54,755	0/0:36,0:36:99:0,102,1426	0/0:35,0:35:99:0,105,1449	1/1:1,14:15:45.11:681,45,0	1/1:0,14:14:36.12:574,36,0	1/1:3,59:62:99:2770,175,0	0/0:13,0:13:36.12:0,36,498	0/0:13,0:13:39.13:0,39,541	0/0:46,0:45:99:0,135,1887	0/0:29,0:29:81.27:0,81,1128	0/0:40,0:40:99:0,117,1619	0/0:14,0:14:42.14:0,42,587	0/0:13,0:13:39.10:0,39,511
chr10	17843926	.	CCA	C	6652.30	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=6.053;DP=692;FS=0.707;HRun=0;HaplotypeScore=92.7695;InbreedingCoeff=0.9994;MQ=59.05;MQ0=6;MQRankSum=3.166;QD=36.75;ReadPosRankSum=2.652;VQSLOD=7.2240;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,113,1957	1/1:1,9:10:24.08:366,24,0	0/0:28,0:21:60.78:0,61,958	0/0:31,0:20:49.56:0,50,995	1/1:2,22:24:60.20:911,60,0	0/0:28,0:28:81.22:0,81,1342	0/0:26,0:26:78.24:0,78,1364	0/0:33,0:32:90.23:0,90,1402	0/0:24,0:24:72.23:0,72,1284	1/1:1,32:31:87.20:1207,87,0	1/1:3,14:16:39.13:595,39,0	0/0:12,0:12:36.10:0,36,627	0/0:20,0:20:60.21:0,60,1093	0/0:22,0:22:66.20:0,66,1144	0/0:30,0:30:90.20:0,90,1460	0/0:26,0:26:75.26:0,75,1372	1/1:2,41:42:95.77:1561,96,0	0/0:41,0:41:99:0,120,2132	0/0:22,0:19:54.17:0,54,912	0/0:14,0:13:39.12:0,39,682	0/0:31,0:31:90.30:0,90,1595	0/0:18,0:18:48.14:0,48,792	0/0:14,0:14:42.13:0,42,713	0/0:30,0:30:87.27:0,87,1449	0/0:20,0:20:57.18:0,57,1013	1/1:1,15:16:44.86:600,45,0	1/1:1,27:28:66.22:999,66,0	1/1:0,10:10:27.09:413,27,0
chr10	17844437	.	TGGA	T	2270.70	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.972;DP=1035;FS=0.549;HRun=0;HaplotypeScore=154.2559;InbreedingCoeff=0.9845;MQ=87.19;MQ0=0;MQRankSum=-2.439;QD=41.29;ReadPosRankSum=3.971;VQSLOD=4.9703;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:62,0:61:99:0,184,4126	0/0:5,0:5:15.05:0,15,343	0/0:31,0:31:83.09:0,83,1880	0/0:46,0:46:99:0,129,2779	0/0:31,0:31:90.29:0,90,2076	0/0:27,0:27:81.26:0,81,1847	0/0:28,0:28:80.64:0,81,1850	0/0:40,0:39:99:0,111,2527	1/1:3,52:55:99:2366,135,0	0/0:44,0:44:99:0,129,2922	0/0:20,0:20:57.18:0,57,1275	0/0:37,0:37:99:0,111,2425	0/0:42,0:42:99:0,123,2730	0/0:47,0:47:99:0,138,3178	0/0:56,0:56:99:0,169,3880	0/0:38,0:38:99:0,111,2572	0/0:54,0:54:99:0,160,3665	0/0:25,0:25:69.24:0,69,1631	0/0:31,0:31:87.30:0,87,1974	0/0:26,0:26:77.07:0,77,1725	0/0:68,0:68:99:0,202,4430	0/0:35,0:35:99:0,105,2380	0/0:14,0:14:42.14:0,42,968	0/0:56,0:56:99:0,166,3750	0/0:33,0:33:99:0,99,2210	0/0:35,0:35:99:0,105,2427	0/0:33,0:33:96.33:0,96,2268	0/0:16,0:16:48.16:0,48,1133
chr10	17847532	.	G	GGGTGGGGA	1445.04	PASS	AC=16;AF=0.348;AN=46;BaseQRankSum=0.835;DP=412;FS=0.844;HRun=0;HaplotypeScore=111.9316;InbreedingCoeff=0.8545;MQ=82.76;MQ0=0;MQRankSum=-3.737;QD=16.42;ReadPosRankSum=-3.743;VQSLOD=1.6649;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:57.18:0,57,1406	./.	0/0:15,0:15:18.06:0,18,372	0/0:17,0:17:17.93:0,18,328	./.	0/0:14,0:14:21.07:0,21,536	0/0:29,0:29:48.10:0,48,955	1/1:10,0:10:10.27:280,10,0	1/1:6,4:10:9.03:372,9,0	1/1:5,0:5:6.02:83,6,0	./.	0/0:23,0:23:57.18:0,57,1405	0/0:18,0:18:48.16:0,48,1220	0/0:21,0:21:33.10:0,33,780	0/0:20,0:20:54.14:0,54,1217	0/0:19,0:19:30.09:0,30,716	./.	0/0:49,0:49:99:0,108,2561	1/1:8,0:8:2.99:24,3,0	1/1:5,3:8:3.01:124,3,0	1/1:26,1:27:14.60:272,15,0	0/0:6,0:6:9.03:0,9,230	0/0:8,0:8:15.05:0,15,357	0/0:22,0:21:48.16:0,48,1228	0/0:8,0:8:18.05:0,18,411	1/1:8,0:8:11.89:119,12,0	1/1:7,5:12:9.03:340,9,0	./.
chr10	17847890	.	C	CG	3571.93	PASS	AC=14;AF=0.259;AN=54;BaseQRankSum=-8.981;DP=386;FS=3.749;HRun=5;HaplotypeScore=45.2523;InbreedingCoeff=0.9175;MQ=85.25;MQ0=0;MQRankSum=-1.327;QD=34.02;ReadPosRankSum=2.497;VQSLOD=4.0298;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,23:24:66.21:866,66,0	0/0:1,0:1:3.01:0,3,32	0/0:13,0:14:18.08:0,18,323	0/0:11,0:11:30.07:0,30,320	0/0:8,0:8:21.05:0,21,226	0/0:8,0:8:21.05:0,21,226	0/0:30,0:30:72.18:0,72,773	0/0:13,0:13:30.06:0,30,317	0/0:6,0:6:18.05:0,18,193	0/0:6,0:6:18.05:0,18,193	0/0:3,0:3:9.02:0,9,96	1/1:2,9:11:27.09:352,27,0	1/1:0,9:9:23.77:315,24,0	1/1:1,6:7:21.06:263,21,0	0/0:8,0:8:24.06:0,24,258	0/0:2,0:2:6.02:0,6,64	0/0:34,0:34:99:0,99,1064	0/0:40,0:41:83.58:0,84,1130	0/0:10,0:10:21.05:0,21,225	0/0:9,0:9:24.06:0,24,258	0/0:43,0:43:99:0,108,1152	1/1:3,4:7:9.03:118,9,0	1/1:0,7:7:18.06:237,18,0	1/1:1,39:40:99:1419,108,0	0/0:11,0:11:24.06:0,24,258	0/0:14,0:14:27.05:0,27,283	0/0:7,0:7:21.05:0,21,226	./.
chr10	17849609	.	AAGATAGATAGATAGATAGATAGATAGAGAGAT	A	2449.18	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=-8.068;DP=430;FS=20.708;HRun=0;HaplotypeScore=318.9747;InbreedingCoeff=-0.2534;MQ=63.84;MQ0=4;MQRankSum=1.405;QD=7.00;ReadPosRankSum=4.191;VQSLOD=0.6073;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:40,0:40:99:120,0,406	0/1:5,0:5:13.99:14,0,69	0/0:19,0:15:14.26:0,14,117	0/0:26,0:13:12.39:0,12,89	0/1:20,0:20:2.95:3,0,277	1/1:7,0:7:8.98:73,9,0	0/1:18,0:18:44.34:95,0,44	1/1:17,0:17:2.97:20,3,0	0/1:15,0:15:1.92:299,0,2	0/1:10,0:10:86.84:122,0,87	1/1:5,0:5:5.99:50,6,0	0/1:17,0:17:58.05:97,0,58	0/0:18,0:18:11.48:0,11,119	0/1:11,0:11:60.37:62,0,60	0/1:16,0:16:26.60:282,0,27	0/1:13,0:13:66.41:151,0,66	0/1:15,0:15:8.32:194,0,8	0/1:14,0:13:54.63:138,0,55	1/1:13,0:12:9.02:212,9,0	1/1:5,10:14:5.93:40,6,0	1/1:24,0:24:23.99:221,24,0	0/0:15,0:15:6.02:0,6,137	0/1:9,0:9:11.71:63,0,12	0/1:16,0:16:9.28:81,0,9	0/1:19,0:19:61.92:62,0,322	0/1:10,0:10:11.30:88,0,11	0/1:21,0:21:99:126,0,118	0/0:2,0:2:3.01:0,3,47
chr10	17849613	.	TAGATAGATAGATAGATAGATAGAG	T	6187.15	PASS	AB=1.000;AC=49;AF=0.907;AN=54;BaseQRankSum=-3.101;DP=403;FS=7.332;HRun=0;HaplotypeScore=227.0404;InbreedingCoeff=0.4778;MQ=62.78;MQ0=4;MQRankSum=1.526;QD=17.88;ReadPosRankSum=4.659;VQSLOD=2.0479;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:39,0:39:47.73:539,48,0	1/1:5,0:5:9.01:189,9,0	0/0:17,0:13:10.25:0,10,112	0/0:26,0:13:12.39:0,12,89	1/1:7,12:19:14.98:211,15,0	1/1:7,0:7:8.98:73,9,0	1/1:16,0:15:23.89:187,24,0	1/1:14,0:14:2.97:20,3,0	1/1:13,0:13:21.03:344,21,0	0/1:11,0:11:72.30:119,0,72	1/1:5,0:5:5.99:50,6,0	1/1:14,0:14:33.02:594,33,0	1/1:16,0:16:14.96:305,15,0	1/1:11,0:11:15:218,15,0	1/1:14,0:14:32.91:448,33,0	1/1:12,0:12:26.82:251,27,0	1/1:16,0:16:32.95:459,33,0	1/1:14,0:13:2.42:184,2,0	1/1:10,0:9:8.98:96,9,0	./.	1/1:21,0:21:23.82:181,24,0	1/1:3,11:14:5.85:34,6,0	1/1:8,0:8:12:172,12,0	1/1:16,0:16:14.46:119,14,0	1/1:19,0:19:35.79:484,36,0	1/1:10,0:10:20.71:235,21,0	1/1:21,0:21:36.02:651,36,0	1/1:1,0:1:2.99:24,3,0
chr10	17849743	.	GTA	G	51.19	PASS	AB=0.901;AC=6;AF=0.107;AN=56;BaseQRankSum=2.115;DP=253;FS=2.225;HRun=0;HaplotypeScore=59.8143;InbreedingCoeff=-0.1524;MQ=54.77;MQ0=2;MQRankSum=-0.680;QD=0.90;ReadPosRankSum=-1.937;VQSLOD=1.3742;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:24.08:0,24,415	0/0:7,0:7:13.17:0,13,130	0/0:19,0:7:12.02:0,12,149	0/0:15,0:8:21.06:0,21,289	0/0:7,0:7:5.92:0,6,50	0/0:10,0:9:21.31:0,21,362	0/0:9,0:9:24.08:0,24,403	0/0:13,0:13:2:0,2,194	0/0:8,0:8:18.06:0,18,275	0/1:14,1:15:47.61:48,0,230	0/0:6,0:6:14.93:0,15,119	0/0:13,0:13:33.50:0,34,642	0/0:11,0:11:28.57:0,29,479	0/0:8,0:8:21.07:0,21,390	0/0:5,0:5:15.05:0,15,275	0/0:10,0:10:27.07:0,27,441	0/1:4,1:5:27.43:27,0,57	0/0:4,0:4:8.98:0,9,120	0/0:2,0:2:2.91:0,3,19	0/0:5,0:5:6.01:0,6,58	0/1:10,0:10:32.99:33,0,70	0/0:10,0:10:30.10:0,30,502	0/0:3,0:3:9.03:0,9,144	0/0:5,0:5:15.05:0,15,274	0/0:17,0:17:51.17:0,51,874	0/1:11,1:12:18.02:18,0,163	0/1:6,4:10:35.61:36,0,139	0/1:5,0:5:10.08:10,0,76
chr10	17849840	.	A	ATGAT	4121.34	PASS	AB=1.000;AC=31;AF=0.554;AN=56;BaseQRankSum=-2.125;DP=398;FS=1.806;HRun=0;HaplotypeScore=85.6483;InbreedingCoeff=-0.4127;MQ=57.54;MQ0=12;MQRankSum=-3.644;QD=11.45;ReadPosRankSum=-2.319;VQSLOD=2.5013;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:16,0:16:30.93:153,0,31	0/1:8,0:8:53.20:77,0,53	0/0:21,0:5:12.27:0,12,90	0/0:15,0:5:6.01:0,6,60	0/1:16,0:16:89.28:89,0,124	0/1:14,0:14:6.45:6,0,162	0/1:15,0:15:37.77:38,0,123	1/1:33,0:31:74.60:635,75,0	0/1:8,0:7:4.02:54,0,4	1/1:1,17:18:54.07:1032,54,0	1/1:10,0:10:11.87:80,12,0	1/1:11,0:11:9.03:135,9,0	0/1:17,0:17:75.90:170,0,76	0/1:14,0:14:84.86:284,0,85	0/1:14,0:13:6.11:6,0,63	0/1:9,0:9:45.70:46,0,98	0/1:7,0:7:1.12:1,0,112	0/1:10,0:10:99:161,0,135	1/1:13,0:13:23.80:218,24,0	0/1:9,0:9:3.29:61,0,3	0/1:22,0:21:2.59:88,0,3	0/1:14,0:14:53.20:161,0,53	0/1:9,0:9:33.75:34,0,63	0/1:14,0:13:6.94:211,0,7	0/1:14,0:14:68.83:69,0,121	0/1:16,0:16:91.49:129,0,91	0/1:18,0:18:99:133,0,138	0/1:10,0:10:49.63:50,0,105
chr10	17849841	.	T	TGATA	3173.33	PASS	AB=0.688;AC=29;AF=0.580;AN=50;BaseQRankSum=-6.216;DP=416;FS=3.794;HRun=0;HaplotypeScore=90.5916;InbreedingCoeff=0.6781;MQ=57.44;MQ0=14;MQRankSum=-1.102;QD=13.22;ReadPosRankSum=-0.388;VQSLOD=2.9842;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,10:17:12.04:256,12,0	0/0:8,0:8:12.04:0,12,176	./.	./.	0/0:16,0:16:24.07:0,24,352	1/1:10,0:16:6.02:72,6,0	1/1:11,0:15:12.02:142,12,0	1/1:32,0:29:0.94:3,1,0	0/0:8,0:7:6:0,6,56	1/1:19,0:18:33.11:594,33,0	./.	1/1:1,11:12:9.03:212,9,0	1/1:4,12:16:12.04:282,12,0	1/1:5,9:16:21.07:495,21,0	1/1:7,0:16:3.01:36,3,0	1/1:10,0:10:6.02:117,6,0	0/0:7,0:7:18.06:0,18,280	0/1:5,4:11:49.82:261,0,50	0/0:13,0:13:6.01:0,6,55	0/0:9,0:9:8.59:0,9,106	0/0:22,0:21:36.01:0,36,328	1/1:7,9:17:12.04:283,12,0	1/1:8,3:11:3.01:71,3,0	1/1:1,12:16:15.05:354,15,0	1/1:6,1:14:12.04:178,12,0	0/0:14,0:15:0.09:0,0,326	0/0:17,0:18:29.19:0,29,439	0/0:10,0:10:21.06:0,21,308
chr10	17849844	.	TAGA	T	550.73	PASS	AB=0.849;AC=10;AF=0.179;AN=56;BaseQRankSum=4.829;DP=412;FS=2.575;HRun=0;HaplotypeScore=92.5410;InbreedingCoeff=0.1983;MQ=56.08;MQ0=15;MQRankSum=0.908;QD=4.79;ReadPosRankSum=-2.847;VQSLOD=1.6532;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:18.06:0,18,318	0/0:8,0:8:23.70:0,24,245	0/1:22,0:5:23.82:24,0,92	0/0:13,0:3:6.02:0,6,78	0/0:15,0:15:41.79:0,42,528	0/0:17,0:17:33.11:0,33,537	0/0:13,0:13:30.10:0,30,462	0/0:29,1:27:20.03:0,20,313	0/1:4,5:8:41.29:41,0,43	0/0:19,0:18:50.27:0,50,649	1/1:11,0:11:11.87:80,12,0	0/0:12,0:12:12.04:0,12,230	0/0:16,0:16:24.08:0,24,401	0/0:16,0:16:36.12:0,36,581	0/0:16,0:15:12.04:0,12,222	0/0:10,0:10:21.07:0,21,280	0/0:8,0:8:21.03:0,21,295	0/0:11,0:11:9.45:0,9,324	0/1:11,2:13:23.70:24,0,157	1/1:2,8:10:2.44:168,2,0	0/1:13,12:24:12.15:342,0,12	0/0:17,0:17:21.07:0,21,337	0/0:9,0:9:12.04:0,12,207	0/0:17,0:16:20.10:0,20,344	0/0:15,0:15:33.11:0,33,531	0/1:15,0:15:9.21:9,0,440	0/0:18,0:18:51.67:0,52,565	0/1:9,1:10:2.25:2,0,316
chr10	17849848	.	TA	T	154.25	PASS	AB=0.605;AC=3;AF=0.054;AN=56;BaseQRankSum=6.782;DP=424;FS=0.000;HRun=1;HaplotypeScore=83.8590;InbreedingCoeff=-0.0794;MQ=54.67;MQ0=15;MQRankSum=-1.324;QD=3.15;ReadPosRankSum=-0.834;VQSLOD=-0.6400;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:21.02:0,21,232	0/0:9,0:9:27.08:0,27,358	0/0:19,0:3:6.88:0,7,70	0/0:14,0:4:9.03:0,9,131	0/0:15,0:15:42.13:0,42,606	0/0:18,0:18:36.11:0,36,536	0/0:13,0:13:30.10:0,30,435	0/0:32,1:30:44.85:0,45,621	0/1:2,2:8:34.17:34,0,84	0/0:18,0:17:51.17:0,51,719	0/0:12,0:12:1.26:0,1,41	0/0:12,0:12:12.02:0,12,136	0/0:17,0:17:27.06:0,27,328	0/0:18,0:18:42.11:0,42,521	0/0:16,0:15:12.04:0,12,187	0/0:10,0:10:21.07:0,21,304	0/0:8,0:8:21.07:0,21,321	0/0:11,0:11:20.41:0,20,257	0/0:11,2:13:6.19:0,6,286	0/1:2,8:10:30.98:58,0,31	0/1:17,13:29:99:161,0,122	0/0:17,0:17:21.05:0,21,252	0/0:10,0:10:15.05:0,15,211	0/0:17,0:16:20.63:0,21,204	0/0:14,0:14:30.10:0,30,448	0/0:13,0:13:36.11:0,36,536	0/0:19,0:19:57.15:0,57,749	0/0:10,1:11:14.82:0,15,423
chr10	17850196	.	TC	T	5071.48	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=12.882;DP=653;FS=4.078;HRun=4;HaplotypeScore=66.5214;InbreedingCoeff=0.9993;MQ=88.84;MQ0=0;MQRankSum=-2.239;QD=32.51;ReadPosRankSum=0.755;VQSLOD=5.5087;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,147,2024	1/1:1,9:10:21.06:252,21,0	0/0:29,0:29:66.20:0,66,859	0/0:19,0:19:38.17:0,38,540	1/1:1,16:17:42.13:504,42,0	0/0:24,0:24:66.22:0,66,924	0/0:35,0:35:99:0,99,1352	0/0:29,0:29:81.26:0,81,1119	0/0:28,0:28:78.24:0,78,1059	1/1:1,27:28:78.24:935,78,0	1/1:0,15:15:36.11:432,36,0	0/0:26,0:26:75.25:0,75,1048	0/0:19,0:19:57.15:0,57,772	0/0:21,0:21:63.20:0,63,866	0/0:24,0:24:69.23:0,69,965	0/0:22,0:22:63.20:0,63,866	1/1:1,30:31:53.39:1040,53,0	0/0:19,0:19:54.12:0,54,717	0/0:15,0:15:42.14:0,42,587	0/0:19,0:19:54.17:0,54,739	0/0:34,0:34:99:0,102,1428	0/0:18,0:18:54.18:0,54,746	0/0:16,0:16:48.16:0,48,669	0/0:30,0:30:87.28:0,87,1201	0/0:19,0:19:51.16:0,51,695	1/1:0,18:18:54.17:648,54,0	1/1:1,19:20:57.17:684,57,0	1/1:0,17:17:48.15:576,48,0
chr10	17851177	.	GGATA	G	4050.12	PASS	AB=0.982;AC=29;AF=0.604;AN=48;BaseQRankSum=6.131;DP=620;FS=9.321;HRun=0;HaplotypeScore=131.1515;InbreedingCoeff=0.6772;MQ=59.19;MQ0=9;MQRankSum=-1.775;QD=11.84;ReadPosRankSum=3.156;VQSLOD=2.2684;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:54.18:0,54,1210	1/1:2,6:8:18.06:264,18,0	./.	./.	1/1:16,4:20:18.06:271,18,0	1/1:9,0:29:11.78:74,12,0	./.	0/0:41,0:39:9:0,9,102	1/1:15,10:25:24.08:375,24,0	1/1:10,12:21:30.10:468,30,0	1/1:8,10:18:36.12:559,36,0	0/0:21,0:24:30.10:0,30,612	0/1:19,0:19:10.73:11,0,607	0/0:27,0:27:45.15:0,45,1022	1/1:12,0:15:2.92:18,3,0	1/1:6,0:22:14.34:89,14,0	1/1:14,11:25:27.09:421,27,0	0/1:15,0:15:8.55:9,0,19	0/0:12,0:9:3.01:0,3,38	0/0:14,0:28:36.59:0,37,645	./.	0/1:17,1:17:23.81:24,0,471	0/0:20,0:19:30.10:0,30,685	0/0:25,0:21:22.85:0,23,522	1/1:7,0:33:22.59:129,23,0	1/1:14,7:21:30.10:449,30,0	1/1:17,18:35:36.12:562,36,0	1/1:8,9:16:21.07:328,21,0
chr10	17851234	.	AATAGATAGATAGATAGATAG	A	424.23	PASS	AB=0.964;AC=10;AF=0.294;AN=34;BaseQRankSum=-0.783;DP=502;FS=6.549;HRun=0;HaplotypeScore=269.7332;InbreedingCoeff=-0.1300;MQ=48.45;MQ0=16;MQRankSum=-2.471;QD=1.98;ReadPosRankSum=-1.707;VQSLOD=1.5901;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:29:6.02:0,6,72	./.	./.	./.	./.	0/0:28,0:28:2.94:0,3,767	0/1:16,0:15:11.56:12,0,233	0/1:34,0:33:0:0,0,0	0/1:14,0:14:8.13:8,0,14	./.	./.	0/1:24,0:23:33.60:34,0,673	0/0:18,0:19:36.07:0,36,772	0/1:26,0:26:99:229,0,400	0/0:14,0:14:0.08:0,0,425	0/1:19,0:19:10.66:11,0,244	./.	0/0:11,0:11:21:0,21,453	0/0:7,0:6:3.01:0,3,40	1/1:25,0:25:16.04:163,16,0	./.	0/1:23,16:38:16.61:17,0,913	0/0:19,10:25:11.87:0,12,325	0/1:17,0:14:65.66:66,0,161	0/0:31,0:31:22.51:0,23,390	./.	./.	./.
chr10	17851266	.	G	GAGGA	534.95	PASS	AB=0.955;AC=10;AF=0.192;AN=52;BaseQRankSum=8.808;DP=453;FS=2.600;HRun=0;HaplotypeScore=154.3922;InbreedingCoeff=-0.2559;MQ=44.99;MQ0=17;MQRankSum=-4.509;QD=2.83;ReadPosRankSum=-4.775;VQSLOD=0.3415;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:26:6.65:0,7,592	0/0:1,0:1:3.01:0,3,60	./.	./.	0/0:4,0:4:9.03:0,9,177	0/1:24,0:24:39.99:40,0,423	0/1:17,0:16:5.20:5,0,216	0/1:23,0:13:8.57:9,0,421	0/1:3,14:17:47.66:169,0,48	0/0:8,0:7:15.05:0,15,283	0/0:4,0:4:9.02:0,9,144	0/0:25,0:23:67.47:0,67,1151	0/0:22,0:22:54.17:0,54,894	0/0:18,0:18:48.16:0,48,878	0/1:17,0:17:83.38:83,0,163	0/1:17,0:17:68.38:68,0,138	0/0:9,0:9:21.06:0,21,414	0/0:17,0:17:8.48:0,8,423	0/1:12,0:9:21.12:21,0,325	0/1:26,0:26:76.47:76,0,140	0/1:9,0:7:23.57:24,0,26	0/0:41,0:39:79.51:0,80,1337	0/0:26,0:22:27.06:0,27,425	0/0:16,0:12:27.09:0,27,521	0/1:27,0:27:99:175,0,113	0/0:7,0:7:21.04:0,21,381	0/0:10,0:10:19.88:0,20,333	0/0:6,0:6:11.98:0,12,163
chr10	17851270	.	G	GAGGA	4853.38	PASS	AB=0.908;AC=11;AF=0.212;AN=52;BaseQRankSum=3.171;DP=465;FS=6.930;HRun=0;HaplotypeScore=145.4266;InbreedingCoeff=-0.1271;MQ=45.19;MQ0=19;MQRankSum=-6.024;QD=24.51;ReadPosRankSum=-4.866;VQSLOD=3.1716;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:26:0.66:0,1,488	0/0:1,0:1:3.01:0,3,60	./.	./.	0/0:4,0:4:9.03:0,9,179	0/1:19,4:23:99:442,0,409	0/1:16,0:15:99:243,0,159	0/1:30,0:20:99:578,0,251	0/0:18,0:18:12.71:0,13,153	0/0:8,0:7:21.07:0,21,374	0/0:5,0:5:9.03:0,9,179	0/0:27,0:24:64.46:0,64,1099	0/0:23,0:22:54.17:0,54,891	0/0:18,0:18:48.15:0,48,847	0/1:15,3:18:99:765,0,125	0/1:14,3:17:99:486,0,125	0/0:10,0:10:21.06:0,21,414	0/1:15,2:17:99:268,0,347	0/1:13,0:10:99:156,0,268	0/1:25,3:28:99:931,0,113	1/1:9,0:7:5.54:114,6,0	0/0:41,0:39:76.50:0,76,1280	0/0:29,0:25:27.09:0,27,465	0/0:16,0:12:27.06:0,27,497	0/1:21,6:27:90.24:871,0,90	0/0:7,0:7:21.07:0,21,418	0/0:9,0:9:21.07:0,21,422	0/0:6,0:6:15.03:0,15,238
chr10	17851309	.	GAATA	G	1580.95	PASS	AB=0.968;AC=19;AF=0.339;AN=56;BaseQRankSum=0.012;DP=553;FS=0.000;HRun=0;HaplotypeScore=163.0941;InbreedingCoeff=-0.3914;MQ=53.33;MQ0=17;MQRankSum=3.911;QD=4.72;ReadPosRankSum=1.419;VQSLOD=2.5878;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:32,0:31:14.87:15,0,596	0/1:5,0:5:33.14:40,0,33	0/0:34,0:6:4.23:0,4,78	0/1:23,0:3:0.68:1,0,7	0/1:11,0:11:80.63:81,0,96	0/0:16,0:16:25.46:0,25,186	0/0:11,0:10:3.78:0,4,121	0/0:51,0:40:85.93:0,86,929	0/0:22,0:22:6.12:0,6,552	0/1:14,0:13:99:102,0,130	0/1:17,0:17:99:151,0,107	0/1:24,0:22:60.87:61,0,332	0/1:12,7:18:99:101,0,194	0/1:7,4:11:23.90:262,0,24	0/0:15,0:15:6.60:0,7,224	0/0:13,0:13:31.44:0,31,198	0/1:23,0:23:99:155,0,224	0/1:15,0:15:25.94:26,0,78	0/1:12,0:12:73.06:73,0,97	0/1:26,0:26:44.33:44,0,190	0/0:7,0:7:12.67:0,13,83	0/1:31,0:29:80.22:80,0,256	0/0:27,0:27:0.02:0,0,615	0/1:16,0:14:10.88:11,0,417	0/0:22,0:22:34.43:0,34,370	0/1:20,0:20:99:111,0,168	0/1:19,0:19:99:195,0,105	1/1:17,0:17:14.52:228,15,0
chr10	17851314	.	AATAG	A	3859.97	PASS	AB=0.838;AC=24;AF=0.480;AN=50;BaseQRankSum=-5.470;DP=556;FS=8.938;HRun=0;HaplotypeScore=158.6248;InbreedingCoeff=0.6572;MQ=54.36;MQ0=15;MQRankSum=2.421;QD=18.12;ReadPosRankSum=1.318;VQSLOD=2.9951;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:30:36.12:0,36,827	1/1:2,4:6:8.90:138,9,0	./.	./.	1/1:4,9:13:23.99:305,24,0	0/0:13,0:13:14.95:0,15,152	0/0:10,0:9:0.81:0,1,2	./.	0/0:22,0:22:21.07:0,21,467	1/1:14,4:17:33.10:470,33,0	1/1:6,12:18:36.06:491,36,0	0/0:24,0:22:21.07:0,21,480	0/1:18,0:17:59.83:60,0,60	1/1:11,0:11:0.01:125,0,0	0/0:16,0:16:6.91:0,7,70	0/0:14,0:14:12.02:0,12,131	0/1:12,11:23:33.85:465,0,34	0/0:13,0:13:2.92:0,3,17	1/1:11,0:12:3:28,3,0	1/1:14,0:25:16.79:118,17,0	1/1:7,0:7:2.75:23,3,0	0/0:29,0:27:18.06:0,18,400	0/0:29,0:29:42:0,42,862	0/0:16,0:14:27.09:0,27,610	0/0:23,0:26:21.02:0,21,315	1/1:8,13:21:33.05:461,33,0	1/1:9,12:21:42.13:623,42,0	1/1:5,15:20:36.12:551,36,0
chr10	17851554	.	G	GC	10475.80	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-2.384;DP=542;FS=5.876;HRun=7;HaplotypeScore=92.3155;InbreedingCoeff=0.8150;MQ=89.19;MQ0=0;MQRankSum=-8.525;QD=21.21;ReadPosRankSum=3.162;VQSLOD=4.5097;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,3:30:48.93:256,49,0	1/1:1,6:7:15.05:181,15,0	0/0:24,0:23:46.89:0,47,411	0/0:24,0:23:3.21:0,3,343	1/1:0,22:22:57.17:689,57,0	1/1:2,15:17:42.11:507,42,0	1/1:2,24:26:66.20:797,66,0	1/1:11,1:30:49.59:304,50,0	1/1:4,15:19:45.13:537,45,0	1/1:3,18:21:51.63:616,52,0	1/1:1,13:14:33.10:399,33,0	1/1:2,0:16:34.47:175,34,0	1/1:1,2:18:37.23:188,37,0	1/1:2,0:22:51.68:263,52,0	1/1:2,15:17:45.14:544,45,0	1/1:0,13:13:33.10:399,33,0	1/1:1,38:39:99:1196,99,0	1/1:0,13:13:36.11:435,36,0	1/1:5,1:26:57.62:324,58,0	1/1:2,1:11:23.19:128,23,0	1/1:3,0:25:51.72:263,52,0	1/1:3,0:11:20.27:111,20,0	1/1:3,0:5:2.88:15,3,0	1/1:4,0:20:40.24:205,40,0	1/1:3,16:19:45.13:535,45,0	1/1:5,15:20:45.14:543,45,0	1/1:4,16:20:39.12:470,39,0	1/1:0,11:11:33.10:399,33,0
chr10	17854346	.	ACTCTCTCTCT	A	1245.04	PASS	AB=0.667;AC=11;AF=0.204;AN=54;BaseQRankSum=2.087;DP=577;FS=0.883;HRun=0;HaplotypeScore=165.8097;InbreedingCoeff=0.6272;MQ=70.40;MQ0=16;MQRankSum=-5.758;QD=11.64;ReadPosRankSum=0.877;VQSLOD=2.5849;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:33:51.02:0,51,2136	0/0:7,0:7:12.03:0,12,215	./.	0/0:66,0:23:4.33:0,4,132	0/0:11,0:14:6.02:0,6,112	0/1:8,6:16:9.02:182,0,9	1/1:14,6:21:6.49:126,6,0	0/0:31,0:31:24.87:0,25,253	0/0:16,0:17:21.03:0,21,664	0/0:17,0:21:49.89:0,50,1708	0/0:13,0:12:12.03:0,12,326	0/0:12,0:17:33.06:0,33,1160	0/0:11,0:21:24.08:0,24,875	0/0:7,0:12:21.04:0,21,700	1/1:6,9:18:6:114,6,0	1/1:13,2:17:5.04:413,5,0	0/0:10,0:17:21.07:0,21,927	1/1:10,11:21:3.62:514,4,0	0/0:10,0:14:26.85:0,27,332	0/0:7,0:12:24.50:0,24,303	0/0:16,0:28:30.07:0,30,498	0/0:8,0:8:3.01:0,3,93	0/0:7,0:7:9.02:0,9,159	0/0:11,0:21:33.10:0,33,1300	1/1:4,8:13:2.96:38,3,0	0/0:10,0:18:44.50:0,45,1352	0/0:13,0:19:24.07:0,24,712	0/0:18,0:20:15.01:0,15,436
chr10	17857567	.	C	CGGTG	848.82	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=10.006;DP=571;FS=5.458;HRun=0;HaplotypeScore=132.7650;InbreedingCoeff=0.1438;MQ=65.91;MQ0=13;MQRankSum=-1.888;QD=3.64;ReadPosRankSum=-3.322;VQSLOD=1.2814;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:47.75:0,48,743	0/1:5,0:5:11.41:11,0,35	0/0:28,0:18:54.08:0,54,896	0/0:32,0:21:38.24:0,38,822	1/1:9,11:26:4.26:100,4,0	0/1:20,0:20:37.02:37,0,53	0/0:14,0:14:20.83:0,21,270	0/0:29,0:28:76.62:0,77,1160	0/0:11,0:11:32.88:0,33,452	0/1:16,0:16:26.71:63,0,27	1/1:14,0:14:10.42:177,10,0	0/0:28,0:28:64.84:0,65,1006	0/0:18,0:18:48.16:0,48,792	0/0:13,0:13:30.06:0,30,419	0/1:22,0:22:45.48:45,0,159	0/0:14,0:14:1.76:0,2,102	0/1:25,0:25:6.54:83,0,7	0/1:15,0:13:22.13:22,0,179	0/0:13,0:13:39.13:0,39,658	0/0:17,0:16:39.13:0,39,643	0/0:23,0:23:60.16:0,60,928	0/0:24,0:24:63.22:0,63,1059	0/0:18,0:18:45.14:0,45,701	0/0:27,0:25:44.88:0,45,731	1/1:18,0:18:10.82:58,11,0	0/1:25,0:25:49.20:100,0,49	0/1:27,0:25:13.54:180,0,14	0/1:20,0:19:11.68:138,0,12
chr10	17857568	.	AGT	A	141.99	PASS	AB=0.948;AC=10;AF=0.200;AN=50;BaseQRankSum=-1.645;DP=600;FS=1.085;HRun=0;HaplotypeScore=108.0092;InbreedingCoeff=0.3224;MQ=62.92;MQ0=16;MQRankSum=1.588;QD=0.93;ReadPosRankSum=1.060;VQSLOD=1.8644;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:30,1:30:12.24:91,12,0	0/0:5,0:5:3.01:0,3,44	./.	./.	0/0:30,0:29:5.85:0,6,68	0/0:19,0:20:14.99:0,15,126	0/0:14,0:14:2.68:0,3,11	0/0:30,0:29:1.25:0,1,3	0/0:10,0:14:3:0,3,26	0/0:17,0:17:21.01:0,21,218	0/0:17,0:16:17.74:0,18,156	0/1:26,3:29:20.03:20,0,119	1/1:15,2:18:11.85:104,12,0	./.	0/0:22,0:22:17.48:0,17,130	0/0:14,0:14:5.03:0,5,31	0/0:26,0:26:14.95:0,15,150	0/0:17,0:15:20.21:0,20,180	0/1:14,0:15:8.13:8,0,16	1/1:14,0:16:5.68:28,6,0	0/0:24,0:23:12.03:0,12,154	0/1:24,0:24:15.07:15,0,79	0/1:17,1:17:17.02:17,0,144	0/0:24,3:25:9.03:0,9,132	0/0:18,0:18:16.76:0,17,117	0/0:32,0:32:29.05:0,29,244	0/0:28,0:26:23.92:0,24,227	0/0:22,0:21:14.98:0,15,146
chr10	17857604	.	T	TGTGTGG	1702.81	PASS	AB=0.986;AC=17;AF=0.304;AN=56;BaseQRankSum=2.994;DP=535;FS=9.312;HRun=0;HaplotypeScore=112.8200;InbreedingCoeff=0.3039;MQ=51.50;MQ0=17;MQRankSum=-1.254;QD=7.31;ReadPosRankSum=4.135;VQSLOD=1.1055;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:47.56:0,48,407	0/0:4,0:3:3.01:0,3,69	0/0:10,0:6:18:0,18,190	0/0:14,0:7:2.73:0,3,145	0/1:25,0:24:9.79:10,0,60	1/1:5,11:21:15.05:418,15,0	1/1:7,1:10:3.78:37,4,0	0/0:24,0:23:58.89:0,59,429	0/0:11,0:11:17.78:0,18,138	0/0:22,0:21:18.35:0,18,370	0/1:20,0:18:99:100,0,142	0/0:28,0:28:53.18:0,53,562	0/0:15,0:15:32.99:0,33,344	0/0:13,0:13:20.96:0,21,173	1/1:6,2:20:21.48:371,21,0	1/1:0,13:14:3.01:104,3,0	0/1:26,0:26:8.09:8,0,244	0/1:17,1:18:18.35:315,0,18	0/0:13,0:12:23.92:0,24,223	0/0:17,0:17:41.91:0,42,385	0/0:30,0:27:68.91:0,69,636	0/0:26,0:26:56.94:0,57,559	0/0:19,0:18:47.92:0,48,459	0/0:25,0:23:29.96:0,30,372	1/1:1,13:20:15.05:288,15,0	0/1:24,0:24:42.33:42,0,309	0/1:22,0:20:72:85,0,72	0/1:11,0:10:77.97:97,0,78
chr10	17858820	.	TTCAG	T	6452.82	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=13.036;DP=610;FS=0.390;HRun=0;HaplotypeScore=100.9347;InbreedingCoeff=0.9992;MQ=83.94;MQ0=1;MQRankSum=-5.521;QD=49.64;ReadPosRankSum=3.389;VQSLOD=5.8300;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,120,3279	0/0:8,0:8:24.08:0,24,658	0/0:20,0:20:60.20:0,60,1499	0/0:27,0:27:81.28:0,81,2168	0/0:20,0:20:60.21:0,60,1627	1/1:2,18:20:45.15:872,45,0	1/1:0,32:32:87.30:1686,87,0	0/0:34,0:34:96.32:0,96,2434	0/0:23,0:23:66.23:0,66,1805	0/0:17,0:17:48.16:0,48,1275	0/0:20,0:20:57.20:0,57,1553	0/0:20,0:20:60.21:0,60,1612	0/0:17,0:17:48.13:0,48,1244	0/0:18,0:18:54.19:0,54,1479	1/1:2,23:25:60.21:1162,60,0	1/1:0,19:19:51.17:988,51,0	0/0:37,0:37:99:0,105,2805	1/1:2,12:13:30.10:582,30,0	0/0:28,0:28:78.27:0,78,2012	0/0:21,0:21:63.22:0,63,1705	0/0:25,0:25:72.25:0,72,1972	0/0:10,0:10:30.10:0,30,776	0/0:10,0:10:30.08:0,30,761	0/0:30,0:30:90.31:0,90,2465	1/1:2,18:20:60.21:1163,60,0	0/0:19,0:19:51.17:0,51,1397	0/0:25,0:25:75.26:0,75,2045	0/0:11,0:11:33.11:0,33,904
chr10	17859262	.	TCA	T	1223.90	PASS	AC=16;AF=0.320;AN=50;BaseQRankSum=-3.944;DP=579;FS=4.874;HRun=0;HaplotypeScore=95.7962;InbreedingCoeff=0.7913;MQ=68.03;MQ0=7;MQRankSum=1.200;QD=8.05;ReadPosRankSum=0.863;VQSLOD=3.1797;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:2.99:0,3,24	1/1:5,3:8:6.02:64,6,0	./.	./.	1/1:14,3:18:9.02:96,9,0	0/0:25,0:25:15.01:0,15,161	0/0:22,0:21:14.71:0,15,138	0/0:24,0:24:24.98:0,25,186	0/0:14,0:12:8.99:0,9,74	1/1:23,3:26:6.01:64,6,0	1/1:11,4:15:9.02:96,9,0	0/0:15,0:16:11.98:0,12,99	0/0:10,0:10:8.99:0,9,75	0/0:17,0:17:11.98:0,12,99	0/0:23,0:23:29.93:0,30,243	0/0:21,0:22:14.98:0,15,124	1/1:13,11:24:33.08:354,33,0	0/0:21,0:21:22.52:0,23,174	0/0:9,0:9:8.99:0,9,95	0/0:20,0:20:8.97:0,9,75	./.	0/0:27,0:27:14.99:0,15,155	0/0:10,0:10:2.98:0,3,21	0/0:34,0:34:26.94:0,27,218	0/0:23,0:22:3.01:0,3,43	1/1:15,8:23:20.41:200,20,0	1/1:14,10:24:30.07:321,30,0	1/1:7,6:14:20.89:207,21,0
chr10	17859301	.	C	CACAT	6532.68	PASS	AB=0.803;AC=37;AF=0.661;AN=56;BaseQRankSum=-7.484;DP=694;FS=21.833;HRun=0;HaplotypeScore=113.4596;InbreedingCoeff=-0.1924;MQ=61.96;MQ0=15;MQRankSum=-1.293;QD=10.54;ReadPosRankSum=3.647;VQSLOD=2.7178;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,29:39:3.01:80,3,0	0/1:5,0:5:11.85:15,0,12	0/0:38,0:18:47.87:0,48,438	0/0:36,0:14:19.49:0,19,251	0/1:28,0:27:31.86:232,0,32	0/1:7,15:23:31.88:207,0,32	0/1:4,21:27:15.78:247,0,16	1/1:30,0:29:15.46:425,15,0	0/1:8,0:20:14.94:107,0,15	0/1:27,0:26:99:214,0,242	1/1:16,0:16:19.12:202,19,0	1/1:3,14:19:11.88:304,12,0	1/1:1,12:15:8.86:171,9,0	0/1:3,12:15:11.93:224,0,12	1/1:5,16:23:30.03:667,30,0	1/1:3,14:19:15.05:380,15,0	0/1:33,0:31:66.34:205,0,66	1/1:2,22:25:24.04:584,24,0	0/1:13,0:13:22.92:158,0,23	0/1:12,0:29:26.77:73,0,27	1/1:27,0:26:10.75:211,11,0	0/1:5,24:32:18.39:145,0,18	1/1:17,0:17:26.52:250,27,0	1/1:2,28:35:27.09:726,27,0	0/1:6,0:19:2.13:11,0,2	0/1:27,0:27:99:308,0,119	0/1:30,0:30:62.20:249,0,62	0/1:20,0:20:54.02:138,0,54
chr10	17859304	.	A	ATACA	6536.97	PASS	AB=1.000;AC=37;AF=0.661;AN=56;BaseQRankSum=-7.797;DP=684;FS=21.833;HRun=0;HaplotypeScore=112.6590;InbreedingCoeff=-0.1919;MQ=65.63;MQ0=15;MQRankSum=-0.651;QD=10.79;ReadPosRankSum=4.493;VQSLOD=2.5351;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:39,0:38:3.01:80,3,0	0/1:7,0:7:11.85:15,0,12	0/0:41,0:21:47.87:0,48,438	0/0:37,0:16:19.49:0,19,251	0/1:27,0:26:31.86:232,0,32	0/1:23,0:22:31.88:207,0,32	0/1:28,0:27:15.77:247,0,16	1/1:31,0:31:17.23:428,17,0	0/1:23,0:21:14.94:107,0,15	0/1:27,0:26:99:214,0,242	1/1:17,0:17:19.12:202,19,0	1/1:19,0:19:11.88:304,12,0	1/1:15,0:15:8.86:171,9,0	0/1:14,0:14:11.93:224,0,12	1/1:22,0:22:30.03:667,30,0	1/1:18,0:18:15.05:380,15,0	0/1:30,0:28:66.34:205,0,66	1/1:25,0:24:24.04:584,24,0	0/1:12,0:12:21.57:159,0,22	0/1:28,0:28:26.77:73,0,27	1/1:27,0:26:10.75:211,11,0	0/1:30,0:30:18.39:145,0,18	1/1:10,4:16:26.52:250,27,0	1/1:34,0:34:27.09:726,27,0	0/1:18,0:17:2.13:11,0,2	0/1:27,0:27:99:308,0,119	0/1:28,0:28:62.20:249,0,62	0/1:20,0:20:54.02:138,0,54
chr10	17860390	.	T	TC	176.32	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=0.208;DP=137;FS=0.000;HRun=5;HaplotypeScore=17.1282;InbreedingCoeff=0.5073;MQ=98.85;MQ0=1;MQRankSum=-0.445;QD=8.01;ReadPosRankSum=1.854;VQSLOD=-0.5738;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:3,0:3:6.01:0,6,64	0/0:2,0:2:3.01:0,3,32	0/0:13,0:8:5.80:0,6,62	0/0:10,0:7:5.70:0,6,40	0/0:5,0:5:9.02:0,9,96	1/1:0,1:1:3.01:39,3,0	1/1:2,4:6:6.02:79,6,0	0/0:11,0:11:27.07:0,27,290	0/0:2,0:2:6.02:0,6,64	0/0:6,0:6:15.04:0,15,160	0/0:1,0:1:3.01:0,3,32	0/0:7,0:7:13:0,13,186	0/0:4,0:4:12.03:0,12,129	0/0:2,0:2:6.02:0,6,64	1/1:3,2:5:3.01:39,3,0	1/1:0,1:1:3.01:39,3,0	0/0:4,0:4:8.69:0,9,74	1/1:1,1:2:3.01:39,3,0	0/0:5,0:5:9.02:0,9,97	0/0:5,0:5:9.02:0,9,96	0/0:13,0:13:27.05:0,27,280	0/0:4,0:4:6:0,6,56	0/0:2,0:2:6.02:0,6,64	0/0:3,0:3:9.02:0,9,97	1/1:5,2:7:6.02:79,6,0	0/0:4,0:4:6.01:0,6,64	0/0:8,0:8:18.01:0,18,176	0/0:1,0:1:3.01:0,3,32
chr10	17861182	.	G	GTGTT	4063.69	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-8.605;DP=441;FS=0.000;HRun=0;HaplotypeScore=73.8363;InbreedingCoeff=0.9739;MQ=72.47;MQ0=1;MQRankSum=-3.991;QD=50.17;ReadPosRankSum=-3.061;VQSLOD=3.4413;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:68.61:0,69,1158	0/0:3,0:3:9.03:0,9,162	0/0:28,0:26:72.16:0,72,1155	0/0:23,0:22:49.92:0,50,719	0/0:9,0:9:21.07:0,21,372	0/0:12,0:12:30.07:0,30,479	0/0:15,0:15:39.12:0,39,665	1/1:6,24:30:72.14:1434,72,0	0/0:16,0:16:45.11:0,45,720	0/0:14,0:14:39.13:0,39,676	0/0:13,0:13:30.10:0,30,539	0/0:14,0:14:42.13:0,42,720	0/0:13,0:13:39.13:0,39,692	0/0:12,0:12:36.11:0,36,611	0/0:22,0:22:57.18:0,57,994	0/0:13,0:13:36.12:0,36,636	0/0:26,0:26:69.17:0,69,1127	0/0:15,0:15:36.08:0,36,569	1/1:6,15:22:54.16:1156,54,0	1/1:5,5:10:26.92:462,27,0	1/1:1,17:19:47.95:1011,48,0	0/0:7,0:7:18.06:0,18,323	0/0:7,0:7:21.07:0,21,377	0/0:8,0:8:18.04:0,18,293	0/0:10,0:10:24.08:0,24,431	0/0:18,0:18:51.17:0,51,902	0/0:27,0:27:72.69:0,73,1235	0/0:6,0:6:18.06:0,18,323
chr10	17867087	.	TC	T	4230.62	PASS	AC=38;AF=0.704;AN=54;BaseQRankSum=6.421;DP=343;FS=11.097;HRun=9;HaplotypeScore=45.8500;InbreedingCoeff=0.8471;MQ=83.66;MQ0=1;MQRankSum=-2.459;QD=18.72;ReadPosRankSum=3.718;VQSLOD=4.2865;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,13:19:23.35:221,23,0	./.	0/0:20,0:13:14.57:0,15,223	0/0:16,0:13:17.14:0,17,211	1/1:3,3:6:15.01:136,15,0	0/0:13,0:13:27.04:0,27,283	0/0:21,0:21:53.95:0,54,578	1/1:1,15:16:42.02:383,42,0	1/1:2,14:16:36.02:329,36,0	1/1:0,5:5:12:110,12,0	1/1:1,0:1:3:27,3,0	1/1:5,15:20:41.97:371,42,0	1/1:1,9:10:24.01:220,24,0	1/1:2,8:10:23.99:214,24,0	0/0:12,0:12:30.06:0,30,326	0/0:11,0:11:27.05:0,27,283	1/1:4,20:24:48.02:439,48,0	0/0:17,0:17:45.11:0,45,502	1/1:2,11:13:4.45:291,4,0	1/1:2,1:2:3:27,3,0	1/1:6,21:27:60.01:543,60,0	1/1:1,1:2:3:27,3,0	1/1:2,1:3:6:55,6,0	1/1:5,13:18:36.02:328,36,0	0/0:7,0:7:18.03:0,18,190	1/1:4,8:12:22.70:178,23,0	1/1:1,14:15:30.01:274,30,0	1/1:4,2:6:6.87:57,7,0
chr10	17870786	.	CAT	C	5221.30	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=7.831;DP=712;FS=7.603;HRun=0;HaplotypeScore=101.0366;InbreedingCoeff=0.9995;MQ=86.85;MQ0=0;MQRankSum=-1.150;QD=41.11;ReadPosRankSum=0.967;VQSLOD=6.2701;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,154,3077	0/0:9,0:9:27.09:0,27,541	0/0:24,0:24:57.17:0,57,1183	0/0:24,0:25:45.97:0,46,1123	0/0:29,0:29:84.26:0,84,1633	1/1:0,20:20:57.19:926,57,0	1/1:0,24:24:51.17:829,51,0	0/0:30,0:30:90.31:0,90,1781	0/0:30,0:30:69.24:0,69,1396	0/0:25,0:25:75.26:0,75,1523	0/0:19,0:19:57.17:0,57,1086	0/0:28,0:28:84.26:0,84,1621	0/0:23,0:23:69.22:0,69,1347	0/0:19,0:19:54.19:0,54,1093	1/1:0,25:25:72.25:1171,72,0	1/1:0,18:18:48.16:780,48,0	0/0:37,0:37:99:0,111,2184	1/1:0,9:9:27.09:439,27,0	0/0:24,0:24:69.17:0,69,1224	0/0:16,0:16:48.15:0,48,900	0/0:41,0:41:99:0,117,2337	0/0:27,0:27:78.24:0,78,1494	0/0:22,0:22:63.22:0,63,1252	0/0:33,0:33:93.22:0,93,1769	1/1:0,31:31:66.23:1075,66,0	0/0:33,0:33:99:0,99,1925	0/0:26,0:25:78.27:0,78,1543	0/0:11,0:11:33.11:0,33,644
chr10	17870818	.	AC	A	527.99	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=0.147;DP=594;FS=0.000;HRun=2;HaplotypeScore=101.4990;InbreedingCoeff=0.9846;MQ=84.34;MQ0=0;MQRankSum=-2.032;QD=24.00;ReadPosRankSum=1.823;VQSLOD=3.4368;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,99,1483	0/0:7,0:7:21.07:0,21,315	0/0:26,0:25:71.22:0,71,970	0/0:28,0:23:66.20:0,66,912	0/0:21,0:21:63.19:0,63,903	0/0:17,0:17:48.16:0,48,721	0/0:22,0:22:60.15:0,60,842	0/0:31,0:31:87.29:0,87,1285	1/1:1,21:22:48.16:623,48,0	0/0:24,0:24:72.24:0,72,1061	0/0:13,0:13:33.11:0,33,494	0/0:19,0:19:48.15:0,48,698	0/0:19,0:19:57.19:0,57,840	0/0:20,0:20:45.15:0,45,672	0/0:22,0:22:57.18:0,57,833	0/0:22,0:22:60.19:0,60,878	0/0:25,0:25:75.25:0,75,1118	0/0:9,0:9:24.08:0,24,354	0/0:10,0:10:27.09:0,27,405	0/0:11,0:11:33.11:0,33,493	0/0:42,0:42:99:0,122,1795	0/0:22,0:22:63.21:0,63,933	0/0:17,0:17:48.15:0,48,699	0/0:29,0:29:72.23:0,72,1054	0/0:24,0:24:66.22:0,66,988	0/0:29,0:29:87.29:0,87,1302	0/0:17,0:17:48.16:0,48,707	0/0:7,0:7:18.06:0,18,270
chr10	17870848	.	T	TAC	117.67	PASS	AB=0.871;AC=7;AF=0.146;AN=48;BaseQRankSum=-3.414;DP=581;FS=6.691;HRun=0;HaplotypeScore=111.2165;InbreedingCoeff=0.1459;MQ=61.48;MQ0=12;MQRankSum=0.664;QD=0.66;ReadPosRankSum=-0.248;VQSLOD=1.7247;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:30,9:39:3.01:44,3,0	0/0:9,0:10:12.74:0,13,112	./.	./.	0/0:21,0:21:15.02:0,15,152	0/0:11,0:14:2.84:0,3,14	0/0:20,0:23:2.84:0,3,14	./.	0/0:14,0:19:8.52:0,9,42	0/0:25,0:24:5.97:0,6,64	0/0:7,0:10:8.85:0,9,78	0/1:16,5:20:32.40:32,0,67	0/0:24,0:24:26.92:0,27,250	0/0:13,0:15:17.86:0,18,161	0/0:14,0:22:17.52:0,18,84	0/0:14,0:19:14.20:0,14,70	0/0:24,0:29:38.38:0,38,319	0/0:12,0:14:5.27:0,5,27	./.	0/0:10,0:14:5.68:0,6,28	0/1:38,0:38:0.17:0,0,0	0/0:16,0:18:17.55:0,18,151	0/1:12,3:16:0:0,0,0	0/1:26,10:41:46.33:115,0,46	0/0:12,0:15:2.84:0,3,14	0/1:21,0:23:31.09:31,0,42	0/0:11,0:11:12.03:0,12,129	0/0:10,0:10:5.84:0,6,46
chr10	17871777	.	TG	T	3759.22	PASS	AB=0.968;AC=25;AF=0.446;AN=56;BaseQRankSum=7.901;DP=760;FS=26.885;HRun=7;HaplotypeScore=111.2574;InbreedingCoeff=-0.0573;MQ=82.78;MQ0=0;MQRankSum=-2.793;QD=7.07;ReadPosRankSum=7.905;VQSLOD=-0.6171;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,120,1450	0/0:11,0:11:1.68:0,2,65	0/0:36,0:36:73.85:0,74,781	0/0:27,0:26:34.24:0,34,370	0/1:30,0:30:29.38:29,0,87	0/1:7,17:24:0.01:374,0,0	1/1:4,22:26:57.12:581,57,0	0/1:28,1:29:58.38:58,0,67	0/1:28,0:28:28.86:29,0,46	0/1:25,0:25:6.24:6,0,90	0/1:16,0:16:27.60:33,0,28	0/0:41,0:41:99:0,108,1254	0/1:23,0:23:27.31:27,0,43	0/1:35,0:35:37.94:38,0,67	1/1:2,32:34:74.93:752,75,0	1/1:6,25:31:67.26:769,67,0	0/1:32,1:33:40.29:40,0,104	1/1:4,17:21:42.09:427,42,0	0/1:21,0:21:28.05:28,0,102	0/0:25,1:26:53.50:0,54,256	0/1:21,0:21:40.64:41,0,80	0/1:20,0:20:16.57:17,0,67	0/0:14,0:14:35.99:0,36,382	0/0:28,0:28:83.73:0,84,992	1/1:7,24:31:10.09:436,10,0	0/1:27,0:27:11.59:12,0,17	0/1:33,0:33:35.59:36,0,62	0/1:24,0:24:26.65:27,0,27
chr10	17871784	.	GA	G	6883.86	PASS	AB=0.982;AC=32;AF=0.571;AN=56;BaseQRankSum=3.007;DP=753;FS=1.760;HRun=9;HaplotypeScore=104.9064;InbreedingCoeff=0.6840;MQ=80.20;MQ0=0;MQRankSum=-2.874;QD=14.68;ReadPosRankSum=7.334;VQSLOD=4.5621;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,135,1428	1/1:3,9:12:24:219,24,0	0/0:31,1:32:34.12:0,34,513	0/0:26,0:25:25.75:0,26,262	1/1:4,30:34:71.65:632,72,0	0/1:23,1:24:33.82:90,0,34	0/1:24,0:24:11.98:47,0,12	0/0:29,0:29:66.94:0,67,710	1/1:3,25:28:63.03:576,63,0	1/1:5,23:28:71.67:609,72,0	1/1:4,10:14:35.99:323,36,0	0/0:35,0:37:97.95:0,98,1059	1/1:3,20:23:41.91:372,42,0	1/1:3,29:32:75.03:685,75,0	1/1:34,0:34:24.91:121,25,0	0/1:31,1:32:53.77:128,0,54	1/1:5,22:28:66.62:585,67,0	0/1:20,0:20:35.74:59,0,36	0/0:22,0:22:54.44:0,54,547	0/0:29,0:29:84.01:0,84,848	0/0:17,0:17:36.03:0,36,375	1/1:4,16:20:23.35:386,23,0	0/0:14,0:14:35.61:0,36,350	0/0:29,0:29:78.22:0,78,891	1/1:31,0:31:1.88:42,2,0	1/1:1,26:27:77.94:695,78,0	1/1:4,31:35:80.67:740,81,0	1/1:2,21:23:63.03:576,63,0
chr10	17872740	.	A	AGATG	8018.42	PASS	AB=1.000;AC=31;AF=0.554;AN=56;BaseQRankSum=-0.422;DP=752;FS=4.603;HRun=0;HaplotypeScore=121.4235;InbreedingCoeff=0.9152;MQ=64.14;MQ0=7;MQRankSum=-1.505;QD=17.94;ReadPosRankSum=0.272;VQSLOD=4.5488;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,21:40:57.67:1338,58,0	0/0:6,0:6:9.03:0,9,140	0/1:31,0:19:0:0,0,0	0/0:20,0:11:3.01:0,3,46	0/0:36,0:36:63.20:0,63,957	1/1:14,16:30:39.13:911,39,0	1/1:17,7:24:12.04:283,12,0	1/1:34,0:34:12.66:101,13,0	1/1:14,0:16:12.04:218,12,0	0/0:37,0:37:45.13:0,45,645	0/0:24,0:24:27.07:0,27,377	1/1:14,6:21:12.04:279,12,0	0/0:33,0:33:51.16:0,51,771	0/0:20,0:20:36.12:0,36,559	1/1:9,17:26:39.13:914,39,0	1/1:17,0:26:18.06:313,18,0	0/0:28,0:28:45.15:0,45,699	1/1:19,15:33:36.11:778,36,0	1/1:21,1:24:8.86:164,9,0	1/1:17,1:42:45.15:754,45,0	1/1:25,0:24:19.57:216,20,0	0/0:36,0:36:72.25:0,72,1118	1/1:18,11:30:23.84:565,24,0	1/1:11,8:20:21.07:494,21,0	1/1:12,10:22:30.10:691,30,0	0/0:26,0:25:42.14:0,42,653	0/0:23,0:23:48.15:0,48,724	0/0:16,0:16:36.11:0,36,538
chr10	17873155	.	T	TAA	4518.32	PASS	AB=1.000;AC=31;AF=0.554;AN=56;BaseQRankSum=-12.389;DP=624;FS=0.822;HRun=14;HaplotypeScore=127.7088;InbreedingCoeff=0.9293;MQ=70.67;MQ0=2;MQRankSum=2.389;QD=12.55;ReadPosRankSum=-4.530;VQSLOD=2.4055;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,14:21:17.42:205,17,0	1/1:0,6:6:18:215,18,0	0/1:24,0:15:2.19:2,0,42	0/0:27,0:16:14.69:0,15,112	1/1:17,6:23:33.12:399,33,0	0/0:2,0:32:79.57:0,80,338	0/0:2,0:21:46.61:0,47,198	0/0:26,0:26:33.65:0,34,145	0/0:12,0:12:20.90:0,21,176	1/1:11,10:23:29.36:284,29,0	1/1:7,16:25:41.05:379,41,0	1/1:4,5:20:19:249,19,0	1/1:4,9:15:11.07:124,11,0	1/1:6,6:17:16.86:155,17,0	0/0:2,0:26:60.37:0,60,257	0/0:3,0:19:41.10:0,41,175	1/1:6,22:29:38.49:480,38,0	0/0:6,0:24:43.82:0,44,187	0/0:15,0:15:29.19:0,29,123	0/0:28,0:28:55.99:0,56,238	0/0:7,0:7:8:0,8,34	1/1:4,12:18:29.43:333,29,0	1/1:2,13:20:17.34:273,17,0	1/1:1,12:16:17.42:205,17,0	0/0:2,0:27:60.35:0,60,257	1/1:10,15:31:46.85:377,47,0	1/1:4,28:34:38.49:480,38,0	1/1:9,23:35:31.82:359,32,0
chr10	17873166	.	AAAAG	A	2616.73	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=-2.211;DP=627;FS=6.045;HRun=0;HaplotypeScore=147.0148;InbreedingCoeff=0.8515;MQ=71.92;MQ0=2;MQRankSum=-4.041;QD=22.18;ReadPosRankSum=-0.765;VQSLOD=3.0885;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:30.05:0,30,498	0/0:7,0:7:21.06:0,21,384	0/0:25,0:15:5.97:0,6,277	0/1:27,0:17:3.56:4,0,305	0/0:27,0:26:75.55:0,76,1063	0/0:33,0:33:40.38:0,40,148	0/0:21,0:21:21.08:0,21,84	1/1:10,24:34:74.77:902,75,0	0/0:9,0:9:21.07:0,21,507	0/0:19,0:19:47.87:0,48,657	0/0:25,0:25:59.87:0,60,937	0/0:21,0:21:42.01:0,42,637	0/0:17,0:17:27.08:0,27,440	0/0:16,0:16:29.96:0,30,425	0/0:28,0:28:30.42:0,30,115	0/0:19,0:19:21.75:0,22,87	0/0:28,0:27:48.12:0,48,820	0/0:19,0:19:13.23:0,13,52	1/1:1,20:21:59.96:731,60,0	1/1:2,25:27:69.12:1009,69,0	1/1:3,6:9:8.99:128,9,0	0/0:17,0:17:44.92:0,45,790	0/0:19,0:19:33.33:0,33,549	0/0:17,0:17:17.07:0,17,372	0/0:29,0:29:27.88:0,28,135	0/0:31,0:30:81.10:0,81,1341	0/0:30,0:30:36.11:0,36,692	0/0:32,0:32:51.15:0,51,958
chr10	17874626	.	A	AT	4607.82	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=3.022;DP=691;FS=5.284;HRun=8;HaplotypeScore=74.0244;InbreedingCoeff=0.9983;MQ=82.15;MQ0=1;MQRankSum=-0.825;QD=18.07;ReadPosRankSum=-0.451;VQSLOD=4.5916;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:96.03:0,96,872	0/0:19,0:19:51.01:0,51,467	0/0:21,0:21:51.02:0,51,463	0/0:17,0:17:35.57:0,36,305	0/0:30,0:30:69.01:0,69,627	1/1:2,1:27:56.82:289,57,0	1/1:3,1:26:53.97:274,54,0	1/1:5,28:33:84.22:956,84,0	0/0:16,0:16:17.09:0,17,303	0/0:34,0:34:90.04:0,90,824	0/0:26,0:26:66.02:0,66,604	0/0:26,0:26:69.03:0,69,632	0/0:25,0:25:69.03:0,69,632	0/0:20,0:20:51.02:0,51,467	1/1:4,2:30:53.97:274,54,0	1/1:2,1:23:54.26:292,54,0	0/0:28,0:28:74.99:0,75,672	1/1:3,0:17:34.09:173,34,0	1/1:3,19:23:63:694,63,0	1/1:6,21:27:63.19:727,63,0	1/1:2,18:20:26.69:561,27,0	0/0:27,0:27:78.04:0,78,714	0/0:21,0:21:54.01:0,54,489	0/0:15,0:15:38.99:0,39,350	1/1:2,1:28:68.35:367,68,0	0/0:31,0:31:84:0,84,758	0/0:33,0:33:96.05:0,96,878	0/0:15,0:15:42.02:0,42,384
chr10	17875260	.	TC	T	3822	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=6.843;DP=670;FS=4.963;HRun=8;HaplotypeScore=79.8497;InbreedingCoeff=0.9745;MQ=84.68;MQ0=0;MQRankSum=-1.911;QD=25.48;ReadPosRankSum=2.113;VQSLOD=4.5217;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:35:38.11:0,38,215	0/0:8,0:8:24.07:0,24,290	0/0:25,0:25:47.85:0,48,505	0/0:22,0:22:56.86:0,57,611	0/0:24,0:24:63.17:0,63,740	1/1:1,21:22:57.09:550,57,0	1/1:5,31:36:87.13:840,87,0	0/0:23,0:23:48.14:0,48,569	0/0:16,0:16:48.13:0,48,564	0/0:24,0:24:57.17:0,57,680	0/0:19,0:19:54.62:0,55,633	0/0:5,0:15:14.47:0,14,89	0/0:28,0:28:81.23:0,81,965	0/0:33,0:33:99:0,99,1171	1/1:4,18:22:54.08:521,54,0	1/1:0,29:29:84.14:811,84,0	0/0:28,0:28:75.23:0,75,905	1/1:2,23:25:69.11:666,69,0	0/0:29,0:29:72.22:0,72,868	0/0:21,0:21:60.18:0,60,723	0/0:40,0:40:99:0,105,1239	0/0:23,0:23:66.20:0,66,797	0/0:2,0:12:23.15:0,23,137	0/0:10,0:31:31.24:0,31,170	1/1:0,16:16:45.07:434,45,0	0/0:32,0:32:87.25:0,87,1030	0/0:29,0:29:78.24:0,78,941	0/0:2,0:2:6.02:0,6,72
chr10	17875397	.	GTT	G	223.90	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.167;DP=747;FS=8.006;HRun=4;HaplotypeScore=100.2745;InbreedingCoeff=0.9993;MQ=85.13;MQ0=0;MQRankSum=-5.486;QD=14.93;ReadPosRankSum=2.625;VQSLOD=0.0839;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:61,0:61:99:0,178,3299	0/0:13,0:13:36.11:0,36,634	0/0:25,0:24:63.13:0,63,1030	0/0:25,0:25:66.93:0,67,1052	0/0:26,0:25:75.20:0,75,1331	0/0:25,0:25:75.26:0,75,1396	0/0:26,0:26:78.25:0,78,1428	0/0:20,0:20:60.21:0,60,1124	1/1:3,12:15:37.81:319,38,0	0/0:33,0:33:99:0,99,1817	0/0:11,0:11:33.11:0,33,618	0/0:20,0:20:57.20:0,57,1062	0/0:26,0:26:78.27:0,78,1461	0/0:39,0:39:99:0,117,2146	0/0:15,0:15:45.15:0,45,837	0/0:27,0:27:78.25:0,78,1429	0/0:36,0:36:99:0,102,1899	0/0:33,0:33:99:0,99,1792	0/0:23,0:23:63.22:0,63,1178	0/0:27,0:27:81.28:0,81,1517	0/0:44,0:44:99:0,132,2437	0/0:29,0:29:84.29:0,84,1564	0/0:19,0:19:51.16:0,51,923	0/0:39,0:39:99:0,108,1975	0/0:21,0:21:63.22:0,63,1181	0/0:32,0:32:93.32:0,93,1743	0/0:26,0:26:78.25:0,78,1429	0/0:11,0:11:33.11:0,33,611
chr10	17875402	.	GCCTCACAATGTGTCCAATCC	G	1818.36	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.128;DP=736;FS=10.084;HRun=0;HaplotypeScore=374.2989;InbreedingCoeff=0.9989;MQ=83.24;MQ0=0;MQRankSum=-5.950;QD=139.87;ReadPosRankSum=2.726;VQSLOD=2.3359;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:61,0:61:99:0,184,16082	0/0:12,0:12:33.11:0,33,2957	0/0:24,0:23:68.80:0,69,4099	0/0:21,0:22:65.68:0,66,3309	0/0:24,0:23:66.23:0,66,5842	0/0:26,0:26:78.27:0,78,6852	0/0:30,0:30:90.30:0,90,7992	0/0:18,0:18:54.19:0,54,4439	1/1:1,12:13:39.13:1913,39,0	0/0:35,0:35:99:0,105,9051	0/0:11,0:11:33.11:0,33,2717	0/0:20,0:20:60.21:0,60,5257	0/0:28,0:28:84.29:0,84,7519	0/0:38,0:38:99:0,114,10671	0/0:14,0:14:42.14:0,42,3591	0/0:24,0:24:72.25:0,72,6278	0/0:37,0:37:99:0,108,9929	0/0:32,0:32:96.33:0,96,8218	0/0:23,0:23:69.24:0,69,5034	0/0:28,0:28:84.27:0,84,7116	0/0:46,0:46:99:0,135,12300	0/0:27,0:27:81.28:0,81,7408	0/0:16,0:16:48.16:0,48,4336	0/0:36,0:36:99:0,105,9699	0/0:21,0:21:63.22:0,63,5019	0/0:34,0:34:99:0,102,8332	0/0:26,0:26:78.27:0,78,7166	0/0:10,0:10:30.10:0,30,2791
chr10	17876021	.	CCCAGT	C	7349.95	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=15.088;DP=697;FS=8.382;HRun=0;HaplotypeScore=133.4837;InbreedingCoeff=0.9997;MQ=76.87;MQ0=0;MQRankSum=-15.624;QD=54.44;ReadPosRankSum=2.391;VQSLOD=5.4239;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,154,4809	0/0:10,0:10:30.10:0,30,919	0/0:16,0:15:42.14:0,42,1166	0/0:18,0:18:48.14:0,48,1238	0/0:14,0:14:42.14:0,42,1314	1/1:1,15:16:36.12:802,36,0	1/1:2,29:31:69.24:1537,69,0	0/0:32,0:32:96.33:0,96,2972	0/0:25,0:25:72.23:0,72,2236	0/0:35,0:35:99:0,105,3291	0/0:12,0:12:36.12:0,36,1163	0/0:27,0:27:81.27:0,81,2499	0/0:30,0:30:90.30:0,90,2728	0/0:29,0:29:81.26:0,81,2511	1/1:0,30:30:69.24:1537,69,0	1/1:0,19:19:57.20:1269,57,0	0/0:45,0:45:99:0,129,4076	1/1:2,17:19:42.14:936,42,0	0/0:12,0:12:33.08:0,33,854	0/0:23,0:23:69.24:0,69,2188	0/0:48,0:48:99:0,141,4289	0/0:21,0:21:63.22:0,63,1938	0/0:12,0:12:36.12:0,36,1100	0/0:35,0:35:99:0,105,3298	1/1:0,20:20:57.20:1269,57,0	0/0:31,0:31:93.32:0,93,2874	0/0:18,0:18:54.19:0,54,1694	0/0:15,0:15:45.15:0,45,1381
chr10	17876468	.	G	GAT	8534.21	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-17.606;DP=794;FS=4.992;HRun=0;HaplotypeScore=89.6076;InbreedingCoeff=0.9998;MQ=91.77;MQ0=1;MQRankSum=-5.698;QD=48.49;ReadPosRankSum=3.885;VQSLOD=6.2211;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,132,1921	0/0:14,0:14:42.14:0,42,618	0/0:39,0:38:96.25:0,96,1324	0/0:28,0:28:74.83:0,75,973	0/0:26,0:26:75.23:0,75,1065	1/1:0,17:17:48.16:898,48,0	1/1:2,30:34:78.27:1460,78,0	0/0:25,0:25:75.21:0,75,1020	0/0:30,0:30:84.28:0,84,1235	0/0:28,0:28:84.23:0,84,1179	0/0:10,0:10:30.10:0,30,441	0/0:51,0:51:99:0,141,2012	0/0:38,0:38:99:0,114,1577	0/0:33,0:33:99:0,99,1387	1/1:2,29:32:84.29:1572,84,0	1/1:2,38:41:99:2022,108,0	0/0:33,0:33:93.27:0,93,1324	1/1:3,27:30:81.28:1516,81,0	0/0:25,0:25:66.03:0,66,835	0/0:13,0:13:33.11:0,33,485	0/0:49,0:48:99:0,144,2081	0/0:16,0:16:48.16:0,48,706	0/0:18,0:18:54.15:0,54,755	0/0:38,0:38:99:0,108,1474	1/1:2,20:22:57.20:1065,57,0	0/0:24,0:24:69.22:0,69,998	0/0:24,0:24:66.22:0,66,968	0/0:11,0:11:33.06:0,33,421
chr10	17877555	.	A	ACT	3964.92	PASS	AB=0.723;AC=28;AF=0.500;AN=56;BaseQRankSum=6.230;DP=694;FS=17.746;HRun=0;HaplotypeScore=167.6528;InbreedingCoeff=0.7988;MQ=54.36;MQ0=14;MQRankSum=2.013;QD=12.79;ReadPosRankSum=3.917;VQSLOD=2.0419;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:19:8.52:93,9,0	1/1:6,0:6:8.99:115,9,0	0/0:32,0:21:53.32:0,53,734	0/0:30,0:25:71.53:0,72,891	1/1:29,0:29:47.94:537,48,0	0/0:30,0:30:42.25:0,42,521	0/0:31,0:29:29.98:0,30,394	0/0:30,0:29:80.70:0,81,1074	0/0:28,0:27:26.99:0,27,395	1/1:7,21:28:20.02:651,20,0	1/1:18,0:18:27.03:326,27,0	1/1:26,0:26:28.15:263,28,0	1/1:21,2:22:35.60:443,36,0	1/1:23,2:24:16.72:227,17,0	0/0:28,0:27:27.05:0,27,342	0/0:25,0:25:5.95:0,6,64	1/1:20,1:20:21.20:290,21,0	0/0:27,0:24:25.52:0,26,526	0/0:23,0:22:57.13:0,57,746	0/0:18,0:17:42.10:0,42,579	0/0:63,0:60:99:0,102,1512	1/1:12,4:16:6:51,6,0	1/1:15,0:15:25.78:183,26,0	1/1:28,0:25:8.58:60,9,0	0/0:19,0:18:18.02:0,18,211	0/1:35,3:36:53.11:550,0,53	0/1:1,12:13:4.98:121,0,5	1/1:2,2:4:5.29:55,5,0
chr10	17877563	.	ACG	A	1635.17	PASS	AB=0.952;AC=31;AF=0.554;AN=56;BaseQRankSum=9.301;DP=714;FS=40.283;HRun=0;HaplotypeScore=169.6439;InbreedingCoeff=0.6495;MQ=41.36;MQ0=24;MQRankSum=0.548;QD=4.33;ReadPosRankSum=1.038;VQSLOD=1.6173;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:18:4.65:30,5,0	1/1:8,1:9:8.82:67,9,0	0/0:23,0:13:17.90:0,18,273	0/1:25,0:20:47.95:48,0,226	1/1:24,3:27:24.63:169,25,0	0/0:31,0:30:16.38:0,16,228	0/0:35,0:33:22.86:0,23,211	0/0:28,0:27:39.98:0,40,590	0/0:32,0:29:22.03:0,22,170	1/1:24,0:24:5.02:230,5,0	1/1:15,1:16:13.40:128,13,0	1/1:23,1:24:10.67:137,11,0	1/1:24,3:26:12.41:142,12,0	1/1:32,0:30:8.97:103,9,0	0/0:31,0:30:17.15:0,17,158	0/0:26,0:25:2.73:0,3,25	1/1:25,1:25:12.56:79,13,0	0/1:27,0:24:6.77:7,0,184	0/0:24,0:23:25.93:0,26,458	0/0:19,0:17:34.86:0,35,476	0/0:69,0:62:69.95:0,70,1493	1/1:20,0:19:5.99:50,6,0	1/1:12,0:12:13.65:95,14,0	1/1:26,0:22:2.66:22,3,0	0/0:18,0:17:9.37:0,9,68	1/1:44,0:41:21.48:451,21,0	1/1:14,0:13:6.01:58,6,0	0/1:5,1:5:5.64:22,0,6
chr10	17877565	.	GCA	G	57.68	PASS	AB=0.990;AC=14;AF=0.250;AN=56;BaseQRankSum=1.977;DP=723;FS=4.213;HRun=0;HaplotypeScore=176.5676;InbreedingCoeff=0.1254;MQ=40.19;MQ0=26;MQRankSum=-1.296;QD=0.22;ReadPosRankSum=0.331;VQSLOD=2.6086;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:19:2.48:24,2,0	0/0:9,0:9:2.71:0,3,8	0/0:20,0:11:9.91:0,10,114	0/0:22,0:18:10.78:0,11,121	0/0:26,1:27:14.72:0,15,101	0/0:32,0:31:5.37:0,5,43	0/0:34,0:32:8.49:0,8,60	0/1:29,0:27:29.47:29,0,425	0/1:32,0:29:3.67:4,0,54	0/0:26,0:25:30.35:0,30,218	0/0:17,0:17:7.78:0,8,46	0/0:24,0:24:9.42:0,9,76	0/0:27,0:26:9.95:0,10,127	0/0:33,0:31:3.96:0,4,46	0/0:33,0:32:2.99:0,3,41	0/1:27,0:25:0:0,0,0	0/1:26,1:26:1.22:1,0,95	0/1:27,0:24:18.87:19,0,45	0/0:21,1:21:11.29:0,11,334	0/0:20,0:18:19.88:0,20,296	0/0:69,0:62:17.92:0,18,1165	0/1:20,0:19:0:0,0,0	0/0:12,0:12:5.20:0,5,29	0/0:26,0:22:3.46:0,3,25	1/1:18,0:18:1.53:4,2,0	0/1:44,2:43:85.49:85,0,240	1/1:15,0:14:1.04:5,1,0	0/1:6,0:5:1.67:2,0,38
chr10	17877569	.	A	ACG	132.18	PASS	AB=0.994;AC=12;AF=0.214;AN=56;BaseQRankSum=5.745;DP=739;FS=18.076;HRun=0;HaplotypeScore=184.0045;InbreedingCoeff=0.1741;MQ=38.61;MQ0=28;MQRankSum=2.511;QD=0.71;ReadPosRankSum=3.664;VQSLOD=1.5147;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:18:2.84:29,3,0	0/1:9,0:9:6.14:6,0,34	0/0:20,0:10:30.06:0,30,335	0/0:19,0:15:36.03:0,36,378	0/1:27,0:27:2.80:3,0,98	0/0:33,1:33:32.51:0,33,234	0/0:34,1:32:17.31:0,17,129	0/0:27,0:22:65.97:0,66,748	0/0:33,0:30:26.80:0,27,261	0/0:30,0:29:39.18:0,39,401	0/0:17,0:17:8.88:0,9,50	1/1:22,0:22:11.77:118,12,0	0/1:29,0:28:26.80:27,0,122	0/0:34,0:31:7.24:0,7,78	0/0:32,2:33:8.87:0,9,86	0/0:31,0:29:2.83:0,3,25	0/0:27,0:26:0.91:0,1,27	0/1:25,1:23:35.57:36,0,134	0/0:24,0:23:52.97:0,53,575	0/0:19,0:17:27.05:0,27,350	0/0:71,0:63:92.24:0,92,1282	0/0:24,0:23:5.99:0,6,50	0/1:12,0:12:17.63:30,0,18	1/1:27,0:23:2.22:18,2,0	0/0:21,0:20:2.76:0,3,25	0/0:46,0:43:47.40:0,47,684	0/1:16,0:15:2.44:2,0,26	0/0:6,0:5:1.47:0,1,36
chr10	17877581	.	ACG	A	1213.15	PASS	AB=0.983;AC=37;AF=0.661;AN=56;BaseQRankSum=5.161;DP=685;FS=33.425;HRun=0;HaplotypeScore=160.0279;InbreedingCoeff=-0.0602;MQ=35.45;MQ0=28;MQRankSum=0.865;QD=2.14;ReadPosRankSum=0.180;VQSLOD=1.0005;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:16:4.64:28,5,0	0/1:9,0:9:1.61:52,0,2	0/1:7,0:5:25.07:25,0,41	0/1:7,0:5:12.95:13,0,73	1/1:26,0:26:7.43:38,7,0	1/1:30,1:30:5.17:87,5,0	1/1:30,2:29:1.92:18,2,0	0/1:25,0:17:2.58:3,0,418	1/1:33,1:31:3.54:114,4,0	0/1:31,0:30:99:105,0,118	0/1:17,0:17:15.09:71,0,15	0/1:20,1:21:6.94:20,0,7	0/1:26,0:26:8.07:94,0,8	1/1:31,1:28:14.37:89,14,0	0/1:29,3:31:10.99:19,0,11	0/1:28,2:27:0:0,0,0	1/1:27,0:26:0.58:48,1,0	1/1:21,1:19:6.69:154,7,0	0/0:22,0:21:9.45:0,9,300	0/0:20,0:16:7.37:0,7,296	0/0:76,0:67:48.06:0,48,1154	1/1:25,0:24:3:25,3,0	1/1:8,0:8:10.41:65,10,0	1/1:25,0:21:2.99:23,3,0	1/1:16,6:21:2.70:29,3,0	0/1:40,1:38:99:169,0,149	0/1:15,0:14:2.61:52,0,3	0/1:5,0:4:5.94:22,0,6
chr10	17877583	.	GCA	G	42.98	PASS	AB=0.992;AC=15;AF=0.268;AN=56;BaseQRankSum=3.449;DP=697;FS=5.699;HRun=0;HaplotypeScore=166.0525;InbreedingCoeff=0.2194;MQ=34.60;MQ0=30;MQRankSum=-0.439;QD=0.15;ReadPosRankSum=3.449;VQSLOD=2.1641;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:18:0.89:0,1,2	0/0:12,0:12:1.17:0,1,26	0/0:6,0:4:0:0,0,0	0/0:4,0:2:3.01:0,3,39	1/1:25,0:25:0.45:11,0,0	0/0:31,0:30:4.51:0,5,16	0/0:34,0:30:7.44:0,7,59	0/0:25,0:17:27.05:0,27,403	0/1:35,0:32:25.92:30,0,26	0/0:29,1:29:5.35:0,5,257	0/0:16,1:17:5.43:0,5,23	0/0:24,0:24:8.96:0,9,76	0/1:25,0:25:23.78:24,0,57	1/1:32,0:28:7.63:30,8,0	0/1:32,0:31:0:0,0,0	0/1:29,0:26:0:0,0,0	0/1:27,0:26:0.68:35,0,1	0/1:22,1:19:2.53:16,0,3	0/0:21,0:20:29.62:0,30,339	0/0:20,0:16:16.87:0,17,238	0/0:76,0:67:63.15:0,63,949	0/1:27,1:27:0:0,0,0	0/0:11,0:11:5.81:0,6,33	0/0:28,0:24:2.99:0,3,23	1/1:22,0:21:1.79:5,2,0	0/0:43,0:40:13.67:0,14,271	0/1:13,0:12:0.34:0,0,43	0/1:5,0:4:14.86:15,0,18
chr10	17877589	.	ACACACT	A	609.91	PASS	AB=1.000;AC=27;AF=0.540;AN=50;BaseQRankSum=4.171;DP=676;FS=2.186;HRun=0;HaplotypeScore=172.9243;InbreedingCoeff=0.0961;MQ=33.11;MQ0=29;MQRankSum=-3.548;QD=1.39;ReadPosRankSum=-0.949;VQSLOD=2.2765;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:19:0.87:2,1,0	0/0:12,0:12:3.62:0,4,13	./.	./.	1/1:25,0:25:2.46:14,2,0	0/0:25,0:24:3.32:0,3,37	1/1:34,1:31:2.96:20,3,0	0/0:21,0:13:8.18:0,8,531	0/1:35,0:32:16.77:22,0,17	0/1:33,0:31:51.35:173,0,51	1/1:16,0:16:2.88:15,3,0	0/1:25,0:25:15.96:31,0,16	0/1:22,0:22:11.18:29,0,11	1/1:31,0:27:0.45:31,0,0	0/0:28,2:29:0:0,0,0	0/1:29,0:26:0.26:0,0,0	1/1:26,0:26:3.30:52,3,0	1/1:23,1:19:26.04:186,26,0	0/0:17,0:16:28.86:0,29,419	0/0:18,0:15:1.25:0,1,154	0/0:79,0:70:65.06:0,65,1046	./.	0/1:12,0:12:0.14:0,0,0	0/1:26,0:22:0:0,0,0	1/1:21,1:21:3:30,3,0	0/1:39,0:37:74.80:75,0,83	0/1:13,0:12:34.93:36,0,35	1/1:7,0:6:1.95:25,2,0
chr10	17877591	.	ACACT	A	873.58	PASS	AB=0.980;AC=30;AF=0.600;AN=50;BaseQRankSum=4.515;DP=664;FS=7.542;HRun=0;HaplotypeScore=159.5146;InbreedingCoeff=0.0997;MQ=32.56;MQ0=29;MQRankSum=-2.296;QD=1.84;ReadPosRankSum=0.125;VQSLOD=1.8833;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:19:2.21:7,2,0	0/0:12,0:12:1.49:0,1,24	./.	./.	1/1:23,0:23:2.49:15,2,0	0/1:23,3:25:20.99:21,0,25	1/1:32,2:30:2.96:20,3,0	0/1:20,0:12:9.01:9,0,462	1/1:33,2:32:5.41:32,5,0	0/1:30,1:29:66.80:223,0,67	1/1:15,0:15:2.88:15,3,0	0/1:25,0:25:12.16:12,0,19	0/1:20,0:20:7.39:30,0,7	1/1:31,0:27:14.79:70,15,0	0/0:27,3:29:0:0,0,0	0/1:27,2:26:0.25:0,0,0	1/1:27,0:26:7.64:49,8,0	1/1:25,0:20:33.49:245,33,0	0/0:20,0:18:24.60:0,25,338	0/0:17,0:14:5.22:0,5,157	0/0:77,0:68:47.43:0,47,898	./.	0/1:12,0:12:0.19:0,0,0	0/1:26,0:22:0:0,0,0	1/1:22,1:22:3:26,3,0	0/1:35,0:33:28.52:136,0,29	0/1:13,0:12:48.75:55,0,49	1/1:7,0:6:5.77:47,6,0
chr10	17877593	.	ACT	A	1062.40	PASS	AB=0.938;AC=32;AF=0.640;AN=50;BaseQRankSum=5.360;DP=645;FS=13.282;HRun=0;HaplotypeScore=158.2263;InbreedingCoeff=0.1083;MQ=31.95;MQ0=31;MQRankSum=-3.935;QD=2.11;ReadPosRankSum=0.364;VQSLOD=2.1439;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:14,3:18:2.21:7,2,0	0/1:12,0:11:14.01:19,0,14	./.	./.	1/1:20,2:22:2.72:15,3,0	0/1:24,2:25:5.62:23,0,6	1/1:31,2:29:2.96:21,3,0	0/1:19,1:12:9.03:9,0,371	1/1:31,4:32:12.62:113,13,0	0/1:28,1:27:52.15:164,0,52	1/1:14,0:14:2.88:15,3,0	0/1:20,5:25:20.99:23,0,21	0/1:20,0:20:4.47:56,0,4	1/1:30,0:26:14.82:74,15,0	0/1:28,2:29:0:0,0,0	0/1:24,5:26:0.13:0,0,0	1/1:25,0:24:17.81:105,18,0	1/1:24,1:20:33.67:234,34,0	0/0:19,0:17:24.87:0,25,317	0/0:17,0:14:5.20:0,5,140	0/0:78,0:68:29.39:0,29,754	./.	0/1:10,1:11:0.19:0,0,0	0/1:22,3:21:0:0,0,0	1/1:21,2:22:3:28,3,0	0/1:32,1:31:4.48:175,0,4	0/1:12,0:11:33.28:47,0,33	1/1:7,0:6:8.89:73,9,0
chr10	17877597	.	A	ACG	50.55	PASS	AB=0.960;AC=9;AF=0.180;AN=50;BaseQRankSum=2.507;DP=656;FS=3.649;HRun=0;HaplotypeScore=161.9245;InbreedingCoeff=0.1437;MQ=31.30;MQ0=34;MQRankSum=-2.847;QD=0.25;ReadPosRankSum=0.248;VQSLOD=2.3373;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:21:2.22:8,2,0	0/0:14,0:13:9.75:0,10,89	./.	./.	0/0:20,1:21:2.73:0,3,22	0/1:28,0:27:9.15:18,0,9	0/0:35,0:31:1.64:0,2,4	0/0:20,0:12:32.97:0,33,388	0/0:36,0:33:8.77:0,9,58	0/0:29,1:27:8.25:0,8,250	0/0:11,1:12:2.99:0,3,24	0/0:24,0:24:14.79:0,15,87	0/0:18,2:20:8.03:0,8,83	0/0:26,5:27:14.03:0,14,91	0/1:33,0:32:0.11:0,0,0	0/1:30,0:27:0.02:0,0,0	0/0:21,1:21:18.22:0,18,106	0/1:25,0:20:5.68:6,0,77	0/0:17,0:14:39.88:0,40,449	0/0:18,0:15:14.84:0,15,135	0/0:78,0:67:68.93:0,69,755	./.	0/0:11,1:12:2.98:0,3,23	0/0:24,2:22:2.98:0,3,21	0/1:25,0:24:0.01:0,0,0	0/1:29,2:29:80.41:80,0,305	0/0:12,0:11:10.03:0,10,77	0/1:5,2:6:38.60:42,0,39
chr10	17877605	.	ACACG	A	893.60	PASS	AB=0.993;AC=25;AF=0.568;AN=44;BaseQRankSum=1.724;DP=667;FS=15.474;HRun=0;HaplotypeScore=153.3288;InbreedingCoeff=-0.0991;MQ=30.30;MQ0=38;MQRankSum=-2.913;QD=2.03;ReadPosRankSum=0.245;VQSLOD=1.5830;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:1.41:0,1,2	0/1:14,0:13:3.91:4,0,28	./.	./.	0/0:23,1:23:0:0,0,0	0/1:27,1:27:19.70:20,0,29	0/1:34,1:32:2.68:3,0,4	0/1:19,0:12:35.34:35,0,101	0/1:35,0:31:4.14:4,0,18	0/1:30,1:26:40.26:222,0,40	0/1:11,0:10:0:0,0,0	0/1:31,0:29:6.37:19,0,6	0/1:18,0:18:13.12:13,0,32	1/1:33,0:29:14.15:90,14,0	./.	1/1:31,0:27:0.35:1,0,0	1/1:21,0:20:7.94:61,8,0	0/1:22,0:18:47.50:107,0,47	0/1:16,0:12:2.75:3,0,108	0/1:16,0:13:6.75:7,0,19	0/0:80,0:69:18.71:0,19,347	./.	./.	./.	1/1:27,1:27:0.07:20,0,0	1/1:29,2:28:13.77:300,14,0	0/1:12,0:11:1.53:56,0,2	1/1:8,0:7:7.96:51,8,0
chr10	17877607	.	ACG	A	1019.08	PASS	AB=0.969;AC=29;AF=0.630;AN=46;BaseQRankSum=1.485;DP=667;FS=19.993;HRun=0;HaplotypeScore=146.2815;InbreedingCoeff=-0.0613;MQ=30.40;MQ0=40;MQRankSum=-1.572;QD=2.03;ReadPosRankSum=-0.197;VQSLOD=1.3559;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:1.41:0,1,2	0/1:14,0:13:9.75:25,0,10	./.	./.	0/1:20,3:22:0.02:0,0,0	0/1:27,1:27:3.04:25,0,3	0/1:36,0:33:2.83:3,0,6	0/1:16,3:12:35.59:36,0,101	1/1:34,0:30:8.37:49,8,0	0/1:29,2:26:24.01:183,0,24	0/1:11,0:10:0:0,0,0	0/1:32,0:29:8.72:17,0,9	0/1:17,0:17:14.86:15,0,18	1/1:34,0:30:14.07:95,14,0	0/1:35,0:34:0:0,0,0	1/1:28,2:26:0.38:1,0,0	1/1:19,1:19:10.57:81,11,0	0/1:23,0:19:38:136,0,38	0/1:16,0:13:10.97:11,0,86	0/1:17,0:14:6.77:7,0,19	0/0:81,0:69:18.57:0,19,299	./.	./.	./.	1/1:28,0:27:0.08:21,0,0	1/1:29,3:29:26.43:332,26,0	1/1:12,0:11:0.23:56,0,0	1/1:7,1:7:10.35:52,10,0
chr10	17877609	.	G	GCACA	814.68	PASS	AB=0.961;AC=29;AF=0.659;AN=44;BaseQRankSum=-0.622;DP=680;FS=9.026;HRun=0;HaplotypeScore=157.2215;InbreedingCoeff=-0.0472;MQ=30.70;MQ0=40;MQRankSum=1.764;QD=1.58;ReadPosRankSum=-2.454;VQSLOD=1.6906;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:19:1.82:5,2,0	0/1:14,0:13:5.22:5,0,27	./.	./.	0/1:25,0:24:0:0,0,0	0/1:30,0:29:4.16:23,0,4	0/1:34,0:33:5.83:6,0,9	1/1:18,0:11:14.93:128,15,0	0/1:36,0:32:5.55:6,0,26	0/1:29,0:25:40.27:43,0,40	0/1:11,0:10:0:0,0,0	1/1:27,0:28:3.34:13,3,0	0/1:18,0:18:1.07:1,0,26	0/0:36,0:33:0.31:0,0,1	./.	1/1:29,0:27:0.94:2,1,0	1/1:21,0:20:3.29:20,3,0	0/1:26,0:21:31.81:32,0,90	1/1:9,8:12:20.98:292,21,0	1/1:5,11:15:3.01:63,3,0	0/1:34,43:74:78.17:137,0,78	./.	./.	./.	0/0:24,0:27:2.87:0,3,27	0/1:31,0:28:29.67:73,0,30	1/1:11,0:10:2.17:20,2,0	1/1:8,0:7:10.29:62,10,0
chr10	17877625	.	ACG	A	998.01	PASS	AB=0.981;AC=28;AF=0.609;AN=46;BaseQRankSum=4.701;DP=719;FS=0.593;HRun=0;HaplotypeScore=164.9989;InbreedingCoeff=0.0460;MQ=31.49;MQ0=43;MQRankSum=-6.335;QD=1.94;ReadPosRankSum=0.159;VQSLOD=2.5622;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:13,6:18:2.22:7,2,0	0/1:13,0:11:6.12:6,0,9	./.	./.	0/1:31,0:30:0.16:0,0,0	0/1:32,0:31:10.59:54,0,11	0/1:43,2:42:36.93:61,0,37	0/1:20,0:19:12.86:13,0,244	1/1:39,0:37:7.90:48,8,0	1/1:33,1:29:13.37:214,13,0	0/1:15,0:12:0:0,0,0	1/1:23,12:32:13.32:98,13,0	0/1:18,1:19:10.81:12,0,11	1/1:35,1:33:3.15:26,3,0	0/0:37,0:33:8.69:0,9,61	0/1:33,2:30:2.31:2,0,85	1/1:19,0:18:10.56:74,11,0	0/1:20,2:19:69.59:70,0,123	0/1:19,0:13:53.61:67,0,54	0/0:18,0:16:8.91:0,9,61	0/0:85,0:74:45.43:0,45,360	./.	./.	./.	0/1:31,0:29:14.88:19,0,15	1/1:35,0:32:3.04:293,3,0	0/1:5,0:4:0.83:1,0,5	1/1:7,3:9:14.41:72,14,0
chr10	17877627	.	GCA	G	177.63	PASS	AB=0.976;AC=9;AF=0.205;AN=44;BaseQRankSum=2.111;DP=705;FS=4.060;HRun=0;HaplotypeScore=169.6189;InbreedingCoeff=0.1109;MQ=31.72;MQ0=43;MQRankSum=-4.256;QD=0.64;ReadPosRankSum=1.780;VQSLOD=2.6485;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,1:20:0.89:0,1,2	0/0:11,1:10:4.17:0,4,11	./.	./.	0/1:30,0:29:0.02:0,0,0	0/1:28,3:30:0.47:0,0,40	0/1:45,1:43:14.18:14,0,94	0/0:22,0:21:57.29:0,57,747	0/1:34,1:34:7.18:34,0,7	0/1:34,0:29:53.59:54,0,144	./.	1/1:34,0:31:6.47:37,6,0	0/0:17,0:17:2.47:0,2,6	0/1:36,0:33:0.04:0,0,1	0/0:35,1:32:8.94:0,9,114	0/0:35,0:30:2.60:0,3,165	0/0:17,0:17:3.47:0,3,17	0/0:21,1:19:13.13:0,13,222	0/0:20,0:14:27.63:0,28,249	0/0:18,0:16:9.03:0,9,123	0/0:80,0:70:53.58:0,54,754	./.	./.	./.	0/0:29,2:29:2.54:0,3,26	0/1:31,1:29:99:147,0,100	0/0:7,0:6:8.72:0,9,57	0/0:10,0:9:8.60:0,9,47
chr10	17877629	.	ACACACG	A	499.22	PASS	AB=0.979;AC=19;AF=0.413;AN=46;BaseQRankSum=4.888;DP=715;FS=7.381;HRun=0;HaplotypeScore=184.6416;InbreedingCoeff=-0.1561;MQ=31.74;MQ0=46;MQRankSum=-5.853;QD=1.16;ReadPosRankSum=0.097;VQSLOD=1.8585;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:20:2.96:19,3,0	0/1:13,0:11:0.58:3,0,1	./.	./.	0/1:27,4:30:0.36:0,0,0	0/1:31,0:30:30.51:31,0,63	0/1:47,0:44:12.44:12,0,63	0/0:22,0:20:57.44:0,57,1054	0/1:37,0:35:7.94:19,0,8	0/1:32,0:27:33.78:159,0,34	0/0:14,1:12:2.77:0,3,16	1/1:35,0:32:12.27:70,12,0	0/1:17,1:17:6.66:31,0,7	1/1:32,3:32:1.60:8,2,0	0/0:36,0:32:5.31:0,5,19	0/1:36,0:31:29.06:29,0,61	0/1:20,0:18:26.50:35,0,27	0/1:22,0:19:61.17:61,0,132	0/0:20,0:13:22.31:0,22,342	0/0:17,0:15:9.03:0,9,153	0/0:81,0:71:60.50:0,60,1081	./.	./.	./.	0/0:31,0:29:2.84:0,3,15	0/1:32,0:29:68.54:113,0,69	0/1:8,1:7:12.24:14,0,12	0/1:10,0:9:11.41:32,0,11
chr10	17877631	.	ACACG	A	473.77	PASS	AB=0.995;AC=14;AF=0.304;AN=46;BaseQRankSum=5.120;DP=723;FS=0.000;HRun=0;HaplotypeScore=177.7480;InbreedingCoeff=-0.1065;MQ=32.00;MQ0=45;MQRankSum=-6.844;QD=1.41;ReadPosRankSum=0.016;VQSLOD=2.4752;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:22:0.47:0,0,1	0/1:13,0:11:0.49:4,0,0	./.	./.	0/1:32,0:31:0.24:0,0,1	0/1:30,0:29:32.33:32,0,55	0/1:46,0:43:5.56:6,0,83	0/0:23,0:21:40.22:0,40,1048	0/1:36,1:35:7.66:21,0,8	0/1:31,1:27:71.05:133,0,71	0/0:15,0:12:2.87:0,3,32	1/1:34,0:31:13.94:190,14,0	0/1:19,0:18:3.58:4,0,4	0/0:34,1:32:1.82:0,2,7	0/0:36,0:32:8.79:0,9,98	0/0:36,0:31:12.20:0,12,103	0/1:20,0:18:30.40:30,0,30	0/1:22,0:19:51.07:51,0,157	0/0:20,0:14:8.99:0,9,373	0/0:16,0:15:9.03:0,9,165	0/0:88,0:75:69.06:0,69,1224	./.	./.	./.	0/0:31,0:29:0.84:0,1,35	0/1:30,0:28:84.45:84,0,86	0/1:9,0:7:9.43:9,0,22	0/1:10,0:9:20.54:36,0,21
chr10	17877633	.	ACG	A	944.35	PASS	AB=0.954;AC=25;AF=0.543;AN=46;BaseQRankSum=6.089;DP=707;FS=0.000;HRun=0;HaplotypeScore=168.7629;InbreedingCoeff=0.0232;MQ=32.73;MQ0=45;MQRankSum=-6.668;QD=2.01;ReadPosRankSum=-0.857;VQSLOD=2.3513;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:18,4:21:2.22:7,2,0	1/1:14,1:13:3.98:32,4,0	./.	./.	0/1:31,1:31:0.18:0,0,0	0/1:30,1:30:10.60:65,0,11	0/1:43,1:41:32.10:32,0,34	0/0:23,0:21:43.15:0,43,888	1/1:34,3:34:16.15:77,16,0	0/1:26,3:25:59.37:196,0,59	0/0:12,2:11:2.54:0,3,11	1/1:23,11:31:14.45:98,14,0	1/1:15,4:18:7.67:29,8,0	1/1:29,5:31:4.55:19,5,0	0/0:31,2:30:8.33:0,8,46	0/1:33,2:30:5.56:6,0,68	0/1:17,2:18:7.93:47,0,8	0/1:22,0:19:50.35:50,0,60	0/1:19,0:13:8.75:9,0,269	0/0:14,0:13:9.03:0,9,152	0/0:91,0:78:67.39:0,67,1092	./.	./.	./.	1/1:30,0:29:3.31:30,3,0	0/1:22,6:25:0.47:327,0,0	0/1:10,0:8:13.51:15,0,14	0/1:10,0:9:14.40:50,0,14
chr10	17877635	.	GCA	G	178.65	PASS	AB=0.957;AC=13;AF=0.283;AN=46;BaseQRankSum=3.209;DP=707;FS=6.444;HRun=0;HaplotypeScore=174.9071;InbreedingCoeff=0.0418;MQ=33.16;MQ0=44;MQRankSum=-3.706;QD=0.52;ReadPosRankSum=3.817;VQSLOD=2.0625;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,4:23:3.88:0,4,26	0/0:14,0:12:3.09:0,3,23	./.	./.	0/1:34,0:33:0.02:0,0,0	0/0:30,1:30:4.64:0,5,14	0/1:38,3:38:22.57:23,0,32	0/0:23,0:21:60.62:0,61,864	0/1:34,2:33:0.12:3,0,0	0/1:28,0:24:20.19:20,0,212	0/0:14,0:11:3.01:0,3,34	0/1:31,4:32:11.32:50,0,11	0/1:20,0:20:10.09:10,0,35	0/0:35,0:32:3.39:0,3,13	1/1:29,1:27:4.19:14,4,0	0/1:33,3:31:0.15:0,0,46	0/0:18,0:17:12.77:0,13,103	0/1:20,1:18:6.92:69,0,7	0/0:19,0:14:26.64:0,27,345	0/0:14,0:13:9.03:0,9,134	0/0:92,0:78:78.16:0,78,1202	./.	./.	./.	1/1:29,2:30:3.23:11,3,0	0/1:28,0:26:99:100,0,140	0/0:11,0:10:13.18:0,13,109	0/0:10,0:9:7.16:0,7,59
chr10	17877645	.	A	ACG	672.53	PASS	AB=0.807;AC=8;AF=0.143;AN=56;BaseQRankSum=0.958;DP=764;FS=1.670;HRun=0;HaplotypeScore=179.3862;InbreedingCoeff=0.0877;MQ=34.00;MQ0=43;MQRankSum=-0.715;QD=2.92;ReadPosRankSum=2.793;VQSLOD=2.5276;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:20,2:23:1.51:2,0,18	0/0:13,0:11:3.19:0,3,25	0/0:16,0:5:11.28:0,11,74	0/0:19,0:5:11.55:0,12,90	0/0:34,0:33:0:0,0,1	0/0:30,0:29:6.46:0,6,30	0/1:27,12:38:29.89:44,0,30	0/0:26,0:24:72.16:0,72,976	0/0:33,0:32:10.72:0,11,74	0/0:32,0:28:54.36:0,54,545	0/0:13,0:10:3.01:0,3,40	0/1:36,2:35:28.90:29,0,35	0/0:25,0:24:14.82:0,15,85	0/0:37,0:34:8.65:0,9,79	1/1:22,13:32:8.79:170,9,0	0/1:29,11:37:69.35:179,0,69	0/0:15,0:13:22.50:0,22,157	0/1:13,7:19:46.74:274,0,47	0/0:23,0:19:41.56:0,42,446	0/0:14,0:13:15.02:0,15,185	0/0:92,0:80:99:0,103,1330	0/0:20,0:19:4.40:0,4,22	0/0:14,0:14:0:0,0,0	0/0:24,0:19:2.99:0,3,23	0/1:22,7:28:13.27:102,0,13	0/0:28,0:25:11.95:0,12,363	0/0:14,0:12:18.12:0,18,153	0/0:9,0:8:9.02:0,9,61
chr10	17877659	.	ACGCACACG	A	2529.84	PASS	AB=0.983;AC=27;AF=0.482;AN=56;BaseQRankSum=6.640;DP=773;FS=3.987;HRun=0;HaplotypeScore=209.9682;InbreedingCoeff=0.6353;MQ=39.28;MQ0=28;MQRankSum=-3.606;QD=6.95;ReadPosRankSum=-1.485;VQSLOD=2.5590;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:23:9:0,9,127	1/1:13,0:12:13.15:112,13,0	0/1:43,0:7:51.96:121,0,52	0/1:43,0:10:93.93:152,0,94	1/1:8,24:31:0.13:0,0,0	0/0:20,0:21:2.61:0,3,56	0/1:36,0:38:8.62:9,0,79	0/0:27,0:26:63.43:0,63,1539	1/1:22,0:20:14.96:72,15,0	1/1:23,0:26:32.33:593,32,0	1/1:9,0:9:8.96:75,9,0	0/0:42,0:39:36.76:0,37,543	1/1:18,0:19:9.92:142,10,0	1/1:34,0:32:20.19:267,20,0	0/0:36,0:34:2.02:0,2,149	0/0:39,0:36:0.93:0,1,196	1/1:14,0:12:22.81:201,23,0	0/0:19,0:18:14.60:0,15,384	0/0:26,0:23:65.64:0,66,1518	0/0:12,0:12:21.07:0,21,698	0/0:92,0:85:99:0,147,4724	1/1:16,0:15:8.93:130,9,0	0/0:18,0:18:18.05:0,18,294	0/0:26,0:22:21.02:0,21,318	0/0:25,0:25:10.93:0,11,172	1/1:23,0:24:26.58:479,27,0	1/1:12,0:11:17.93:198,18,0	1/1:8,0:9:17.17:178,17,0
chr10	17877663	.	ACACG	A	1183.46	PASS	AB=0.948;AC=19;AF=0.339;AN=56;BaseQRankSum=5.325;DP=775;FS=37.902;HRun=0;HaplotypeScore=195.1463;InbreedingCoeff=0.3607;MQ=40.82;MQ0=21;MQRankSum=-0.393;QD=3.61;ReadPosRankSum=-0.543;VQSLOD=1.3144;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:25:15.05:0,15,274	1/1:13,0:12:11.28:64,11,0	0/1:47,0:7:34.89:35,0,97	0/1:45,0:12:55.67:56,0,140	0/1:28,0:28:0.29:0,0,0	0/0:22,0:22:5.04:0,5,90	0/0:36,0:36:27.47:0,27,304	0/0:31,0:30:78.23:0,78,1349	0/1:24,0:22:5.48:11,0,5	0/1:25,4:29:88.26:293,0,88	1/1:9,1:8:4.60:41,5,0	0/0:42,0:40:44.14:0,44,810	0/1:17,2:18:3.13:93,0,3	1/1:34,0:33:19.73:180,20,0	0/0:33,0:30:20.35:0,20,222	0/0:35,0:34:29.23:0,29,290	0/1:14,0:12:9.46:117,0,9	0/0:20,0:18:35.99:0,36,484	0/0:29,0:27:72.23:0,72,1432	0/0:13,0:13:24.08:0,24,597	0/0:92,0:87:99:0,153,4015	1/1:16,0:16:8.78:60,9,0	0/0:19,0:19:24.07:0,24,450	0/0:28,0:25:27.09:0,27,537	0/0:21,0:21:17.60:0,18,162	0/1:23,2:23:3.68:196,0,4	1/1:12,1:12:7.14:114,7,0	0/1:7,2:9:8.70:100,0,9
chr10	17877665	.	ACG	A	1640.33	PASS	AB=0.986;AC=22;AF=0.393;AN=56;BaseQRankSum=4.358;DP=792;FS=29.331;HRun=0;HaplotypeScore=185.7532;InbreedingCoeff=0.4392;MQ=41.13;MQ0=22;MQRankSum=-0.925;QD=4.54;ReadPosRankSum=-2.505;VQSLOD=1.4591;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:25:15.02:0,15,238	1/1:12,0:11:13.32:99,13,0	0/1:50,3:7:38.36:38,0,59	0/1:46,3:13:65.88:66,0,116	0/1:28,0:28:0.39:0,0,1	0/0:22,0:22:2.42:0,2,69	0/0:36,0:37:31.22:0,31,329	0/0:29,0:28:78.04:0,78,1178	1/1:15,7:21:11.58:247,12,0	0/1:29,0:29:99:257,0,127	0/1:11,0:9:0.51:53,0,1	0/0:40,0:38:44.21:0,44,722	1/1:20,0:19:5.10:126,5,0	1/1:36,0:35:20.29:171,20,0	0/0:35,0:32:23.70:0,24,198	0/0:37,0:36:31.34:0,31,296	0/1:16,0:14:10.50:91,0,10	0/0:20,0:18:35.79:0,36,416	0/0:28,0:26:72.20:0,72,1190	0/0:13,0:13:27.08:0,27,469	0/0:95,0:91:99:0,161,3074	1/1:17,0:17:11.84:85,12,0	0/0:20,0:20:24.04:0,24,410	0/0:29,0:26:27.05:0,27,466	0/1:20,0:20:8.98:9,0,121	1/1:27,0:25:18.26:344,18,0	1/1:12,0:11:17.25:161,17,0	0/1:9,0:9:17.59:83,0,18
chr10	17878735	.	ATCAACTGTC	A	4078.82	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=10.600;DP=691;FS=1.167;HRun=0;HaplotypeScore=187.8128;InbreedingCoeff=0.9955;MQ=89.62;MQ0=0;MQRankSum=-8.277;QD=52.97;ReadPosRankSum=-3.961;VQSLOD=2.5018;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:57:99:0,169,8072	0/0:10,0:10:27.09:0,27,1218	0/0:30,0:30:81.26:0,81,2983	0/0:24,0:24:59.52:0,60,2276	0/0:25,0:25:72.25:0,72,3445	0/0:21,0:21:60.21:0,60,2824	0/0:23,0:23:69.23:0,69,3078	1/1:3,13:16:39.11:1108,39,0	0/0:38,0:38:99:0,111,5271	0/0:22,0:22:60.20:0,60,2708	0/0:12,0:12:33.10:0,33,1290	0/0:26,0:26:72.25:0,72,3402	0/0:22,0:22:66.21:0,66,3022	0/0:20,0:20:60.21:0,60,2744	0/0:19,0:19:57.20:0,57,2689	0/0:16,0:16:45.15:0,45,2110	0/0:44,0:44:99:0,129,6127	0/0:41,0:41:99:0,120,5709	1/1:2,19:21:57.16:1523,57,0	1/1:3,14:17:27.09:809,27,0	1/1:5,18:23:20.41:639,20,0	0/0:25,0:25:69.24:0,69,3309	0/0:11,0:11:27.09:0,27,1147	0/0:35,0:35:99:0,99,4548	0/0:21,0:21:63.22:0,63,2896	0/0:28,0:28:75.26:0,75,3587	0/0:38,0:38:99:0,105,4927	0/0:6,0:6:18.06:0,18,871
chr10	17879216	.	GTT	G	6709.35	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=8.541;DP=601;FS=10.639;HRun=10;HaplotypeScore=92.4141;InbreedingCoeff=0.9965;MQ=74.46;MQ0=0;MQRankSum=1.545;QD=28.43;ReadPosRankSum=-0.593;VQSLOD=3.8082;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:45:99:0,113,1688	0/0:11,0:11:33.11:0,33,523	0/0:28,0:21:29.43:0,29,341	0/0:21,0:18:14:0,14,237	0/0:12,0:12:36.11:0,36,548	1/1:2,14:16:45.12:502,45,0	1/1:4,21:25:72.19:803,72,0	1/1:3,26:29:78.18:857,78,0	0/0:12,0:12:36.12:0,36,572	0/0:17,0:17:45.15:0,45,713	0/0:20,0:20:54.17:0,54,831	0/0:15,0:15:39.11:0,39,574	0/0:21,0:21:57.18:0,57,875	0/0:14,0:14:39.13:0,39,618	1/1:2,17:19:54.13:593,54,0	1/1:5,16:21:51.13:568,51,0	0/0:31,0:32:89.78:0,90,1367	1/1:10,15:25:57.06:608,57,0	1/1:4,23:27:69.14:742,69,0	1/1:3,21:24:57.14:634,57,0	1/1:3,26:29:69.15:769,69,0	0/0:16,0:17:45.15:0,45,694	0/0:14,0:14:36.12:0,36,559	0/0:20,0:22:63.20:0,63,958	1/1:5,16:21:57.15:635,57,0	0/0:23,0:23:60.20:0,60,952	0/0:32,0:32:87.27:0,87,1315	0/0:9,0:9:24.08:0,24,381
chr10	17879288	.	CA	C	4076.31	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=5.746;DP=714;FS=11.210;HRun=6;HaplotypeScore=85.3301;InbreedingCoeff=0.9999;MQ=75.25;MQ0=0;MQRankSum=-4.382;QD=28.11;ReadPosRankSum=3.199;VQSLOD=3.6158;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,123,1587	0/0:14,0:14:39.11:0,39,499	0/0:28,0:28:66.14:0,66,822	0/0:26,0:26:60.17:0,60,726	0/0:19,0:19:48.13:0,48,604	1/1:0,15:15:33.08:354,33,0	1/1:2,22:24:63.16:677,63,0	0/0:32,0:32:84.25:0,84,1069	0/0:13,0:13:39.10:0,39,481	0/0:22,0:21:66.21:0,66,868	0/0:22,0:22:57.18:0,57,737	0/0:32,0:32:93.27:0,93,1180	0/0:22,0:22:63.18:0,63,801	0/0:21,0:20:60.18:0,60,774	1/1:1,29:30:81.20:870,81,0	1/1:3,16:19:48.10:508,48,0	0/0:42,0:42:99:0,120,1549	1/1:2,30:32:90.22:967,90,0	0/0:25,0:25:66.21:0,66,852	0/0:17,0:17:51.12:0,51,651	0/0:40,0:40:99:0,111,1444	0/0:19,0:19:48.16:0,48,631	0/0:26,0:26:75.23:0,75,971	0/0:25,0:25:75.23:0,75,971	1/1:3,22:25:66.15:700,66,0	0/0:24,0:24:66.19:0,66,841	0/0:39,0:39:99:0,111,1460	0/0:16,0:16:48.16:0,48,630
chr10	17879659	.	T	TACAAA	17938.92	PASS	AB=0.904;AC=38;AF=0.679;AN=56;BaseQRankSum=-12.929;DP=660;FS=0.000;HRun=0;HaplotypeScore=140.4883;InbreedingCoeff=0.8364;MQ=74.66;MQ0=3;MQRankSum=-3.679;QD=41.33;ReadPosRankSum=1.762;VQSLOD=4.6473;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:54.18:0,54,982	1/1:6,9:15:30.10:857,30,0	0/0:36,0:27:38.33:0,38,610	0/0:58,0:37:24.63:0,25,598	1/1:11,11:22:39.13:978,39,0	0/1:16,5:21:23.04:777,0,23	1/1:20,7:29:36.12:952,36,0	0/1:24,0:24:11.15:11,0,498	0/0:19,0:19:42.14:0,42,780	1/1:14,12:26:51.16:1389,51,0	1/1:9,7:16:21.07:552,21,0	0/0:17,0:17:33.10:0,33,585	1/1:6,9:15:32.29:940,32,0	1/1:15,5:20:36.12:999,36,0	1/1:19,9:28:36.12:1021,36,0	1/1:12,11:24:48.16:1341,48,0	1/1:20,9:30:51.18:1460,51,0	1/1:15,9:26:45.15:1264,45,0	0/0:22,0:22:39.10:0,39,633	0/0:17,0:17:42.14:0,42,786	0/0:24,0:24:24.08:0,24,449	1/1:15,6:22:30.10:793,30,0	1/1:16,7:23:27.56:695,28,0	1/1:16,8:25:33.07:854,33,0	1/1:15,0:15:12.04:338,12,0	1/1:12,5:18:30.10:812,30,0	1/1:17,5:25:40.02:1043,40,0	1/1:0,10:10:30.10:862,30,0
chr10	17879682	.	A	AAAACC	13417.93	PASS	AB=0.867;AC=24;AF=0.429;AN=56;BaseQRankSum=-5.277;DP=645;FS=114.941;HRun=0;HaplotypeScore=146.2587;InbreedingCoeff=-0.1916;MQ=76.32;MQ0=3;MQRankSum=-3.562;QD=31.57;ReadPosRankSum=6.768;VQSLOD=1.5421;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:7.03:0,7,1172	1/1:10,1:12:32.47:698,32,0	0/0:33,0:24:49.73:0,50,812	0/0:53,0:39:15.59:0,16,869	1/1:21,0:21:7.97:784,8,0	0/1:13,5:23:99:544,0,145	0/1:20,1:22:64.63:681,0,65	0/0:19,0:19:16.10:0,16,698	0/0:17,0:17:21.18:0,21,780	0/1:24,2:27:65.07:884,0,65	0/1:18,0:18:9:417,0,9	0/0:22,0:22:15.01:0,15,716	0/1:19,4:23:80.84:782,0,81	0/1:16,3:19:80.04:627,0,80	0/1:16,4:20:16.78:806,0,17	1/1:14,6:20:26.04:1070,26,0	0/1:16,8:24:7.15:1234,0,7	0/1:19,4:23:61.62:837,0,62	0/0:21,0:21:25.17:0,25,664	0/1:26,0:26:35.72:36,0,949	0/0:18,0:18:4.08:0,4,578	0/1:22,3:25:46.94:732,0,47	0/1:21,2:23:75.11:531,0,75	1/1:11,3:15:12.22:615,12,0	0/1:4,6:17:75.92:341,0,76	0/1:22,2:24:46.88:570,0,47	0/1:25,3:28:82.06:654,0,82	0/1:15,0:15:52.84:576,0,53
chr10	17879943	.	ATTTCTTTTGT	A	9016.35	PASS	AB=0.997;AC=46;AF=0.821;AN=56;BaseQRankSum=3.904;DP=676;FS=13.370;HRun=0;HaplotypeScore=174.4404;InbreedingCoeff=0.3146;MQ=76.89;MQ0=6;MQRankSum=0.627;QD=14.54;ReadPosRankSum=1.465;VQSLOD=3.3298;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:39,0:39:0.57:1,0,304	1/1:0,11:11:17.47:481,17,0	0/0:36,0:24:23.74:0,24,280	0/1:43,0:24:0.23:0,0,235	1/1:4,15:19:34.21:324,34,0	1/1:15,0:15:15.05:382,15,0	1/1:15,0:14:29.79:230,30,0	1/1:21,0:21:38.97:330,39,0	1/1:20,0:20:12.04:306,12,0	1/1:2,26:28:74.62:948,75,0	1/1:5,21:26:52.81:598,53,0	0/1:29,0:29:99:157,0,265	1/1:5,18:24:18.06:557,18,0	1/1:5,13:18:7.40:274,7,0	1/1:3,18:21:15.05:447,15,0	1/1:27,0:27:8.86:229,9,0	1/1:3,21:24:3.01:93,3,0	0/1:31,0:31:9.97:70,0,10	0/1:21,0:19:12.62:273,0,13	0/1:23,0:23:99:124,0,264	0/0:20,0:20:2.97:0,3,20	1/1:2,12:14:26.51:374,27,0	1/1:8,19:27:6.77:166,7,0	1/1:20,3:23:35.39:520,35,0	1/1:29,0:29:18.03:404,18,0	1/1:4,19:23:53.82:694,54,0	1/1:5,21:26:23.67:662,24,0	1/1:4,12:16:12.04:373,12,0
chr10	17879947	.	CTTTTGTTTTCTTTTG	C	5055.22	PASS	AB=0.966;AC=37;AF=0.661;AN=56;BaseQRankSum=4.013;DP=658;FS=13.958;HRun=0;HaplotypeScore=215.0627;InbreedingCoeff=-0.1049;MQ=73.19;MQ0=15;MQRankSum=-0.265;QD=9.31;ReadPosRankSum=2.215;VQSLOD=2.8345;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:36,0:36:35.48:35,0,304	1/1:11,0:11:15.64:67,16,0	0/0:38,0:19:23.96:0,24,281	0/0:59,0:25:4.90:0,5,255	0/1:16,0:16:81.80:82,0,222	1/1:1,14:15:15.05:647,15,0	1/1:12,0:11:29.79:230,30,0	1/1:20,0:20:38.97:330,39,0	1/1:1,20:21:12.04:518,12,0	0/1:27,0:27:87.06:359,0,87	0/1:25,0:25:62.13:198,0,62	0/1:28,0:28:99:297,0,265	1/1:23,0:23:15.35:60,15,0	1/1:17,0:17:5.97:26,6,0	1/1:21,0:21:4.68:33,5,0	1/1:2,25:27:8.49:387,8,0	0/1:23,0:23:4.80:5,0,69	0/1:6,0:30:9.97:105,0,10	0/1:19,0:17:99:247,0,249	0/1:22,0:22:99:103,0,946	0/0:18,0:18:3.01:0,3,85	0/1:14,0:14:33.10:85,0,33	0/1:26,0:26:13.56:14,0,88	0/1:22,0:22:64.66:135,0,65	1/1:3,25:28:18.06:720,18,0	0/1:22,0:22:61.77:245,0,62	1/1:24,0:25:21.23:85,21,0	1/1:13,0:13:10.59:44,11,0
chr10	17879952	.	GTTTTC	G	5898.34	PASS	AB=0.989;AC=46;AF=0.821;AN=56;BaseQRankSum=6.546;DP=627;FS=20.088;HRun=0;HaplotypeScore=127.5002;InbreedingCoeff=0.4106;MQ=67.36;MQ0=23;MQRankSum=-0.371;QD=11.92;ReadPosRankSum=2.932;VQSLOD=2.9593;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:36.86:0,37,347	1/1:11,0:11:17.57:219,18,0	0/0:36,0:15:24:0,24,281	0/0:59,0:20:2.86:0,3,245	1/1:15,0:15:20.18:204,20,0	1/1:14,0:14:15.05:208,15,0	1/1:12,0:11:29.79:230,30,0	1/1:19,0:18:38.97:330,39,0	1/1:21,0:21:12.04:166,12,0	1/1:26,0:26:51.49:636,51,0	1/1:24,0:24:38.83:371,39,0	0/1:29,0:29:17.81:18,0,265	1/1:18,0:19:18.06:242,18,0	1/1:15,0:15:7.40:116,7,0	1/1:19,0:19:15.03:186,15,0	1/1:27,0:27:8.71:124,9,0	0/1:23,0:23:10.98:35,0,11	0/1:27,0:27:22.10:32,0,22	1/1:1,16:16:47.95:508,48,0	1/1:1,20:21:57.13:499,57,0	1/1:0,18:18:3.01:63,3,0	1/1:13,0:13:26.51:217,27,0	0/1:20,1:21:6.41:62,0,6	1/1:22,0:22:13.76:317,14,0	1/1:25,0:25:17.97:225,18,0	1/1:20,0:20:30.74:436,31,0	1/1:23,0:24:23.67:294,24,0	1/1:13,0:13:12.04:163,12,0
chr10	17879957	.	CTTTTGTTTTGTTTTGTTTTG	C	1236.52	PASS	AB=0.843;AC=12;AF=0.222;AN=54;BaseQRankSum=6.102;DP=665;FS=5.697;HRun=0;HaplotypeScore=264.6411;InbreedingCoeff=0.6477;MQ=63.88;MQ0=24;MQRankSum=-4.331;QD=7.11;ReadPosRankSum=2.281;VQSLOD=1.6893;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:19,16:35:56.94:153,0,57	0/0:13,0:13:22.32:0,22,696	0/0:34,0:13:0.47:0,0,1	0/0:58,0:19:6.49:0,6,79	0/0:22,0:22:45.15:0,45,1937	1/1:14,0:14:15.02:141,15,0	0/0:13,0:12:18.06:0,18,431	./.	1/1:20,0:20:12.02:115,12,0	0/0:33,0:33:54.66:0,55,2244	0/0:29,0:29:48.16:0,48,1997	1/1:14,14:28:12.04:634,12,0	0/0:22,0:22:27.09:0,27,933	0/0:17,0:17:18.06:0,18,699	0/0:26,0:26:39.13:0,39,1709	1/1:25,0:25:8.30:85,8,0	0/0:26,0:26:21.07:0,21,949	1/1:27,0:27:2.84:145,3,0	0/0:21,0:17:14.26:0,14,658	0/0:22,0:22:40.38:0,40,2115	0/0:18,0:18:3.01:0,3,173	0/0:17,0:17:30.10:0,30,1214	0/0:21,0:21:16.83:0,17,514	0/0:25,0:24:60.16:0,60,2269	0/1:25,0:25:8.35:124,0,8	0/0:20,0:20:30.10:0,30,1016	0/0:25,0:25:30.10:0,30,1006	0/0:12,0:12:12.04:0,12,289
chr10	17886178	.	C	CG	5299.69	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-11.681;DP=685;FS=5.193;HRun=1;HaplotypeScore=70.0292;InbreedingCoeff=0.9994;MQ=87.76;MQ0=0;MQRankSum=-3.087;QD=43.80;ReadPosRankSum=-1.065;VQSLOD=4.3870;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,99,1385	0/0:8,0:8:24.08:0,24,336	0/0:25,0:25:69.14:0,69,912	0/0:25,0:25:47.86:0,48,889	0/0:27,0:27:78.25:0,78,1071	0/0:21,0:21:63.20:0,63,865	0/0:28,0:28:84.27:0,84,1154	1/1:2,28:30:84.23:1286,84,0	0/0:23,0:23:69.20:0,69,945	0/0:36,0:36:99:0,102,1400	0/0:14,0:14:42.14:0,42,584	0/0:28,0:28:72.22:0,72,988	0/0:20,0:20:57.19:0,57,797	0/0:25,0:25:75.25:0,75,1049	0/0:27,0:27:81.26:0,81,1111	0/0:32,0:32:96.32:0,96,1343	0/0:32,0:32:93.31:0,93,1296	0/0:25,0:25:75.25:0,75,1046	1/1:2,23:25:69.23:1097,69,0	1/1:0,27:27:72.25:1147,72,0	1/1:0,39:39:99:1769,111,0	0/0:24,0:24:72.24:0,72,1003	0/0:17,0:17:45.14:0,45,611	0/0:13,0:13:39.13:0,39,546	0/0:20,0:20:60.20:0,60,839	0/0:29,0:29:84.26:0,84,1129	0/0:16,0:16:48.14:0,48,644	0/0:15,0:15:42.14:0,42,587
chr10	17886229	.	GA	G	1891.56	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.015;DP=690;FS=0.000;HRun=1;HaplotypeScore=68.7825;InbreedingCoeff=0.9918;MQ=81.98;MQ0=0;MQRankSum=-3.359;QD=31.53;ReadPosRankSum=4.060;VQSLOD=3.2883;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,33:33:78.26:1073,78,0	0/0:5,0:5:15.05:0,15,224	0/0:23,0:22:63.05:0,63,856	0/0:19,0:18:35.77:0,36,586	0/0:18,0:18:54.18:0,54,806	0/0:21,0:21:63.17:0,63,880	0/0:37,0:37:99:0,111,1619	0/0:29,0:29:84.16:0,84,1179	0/0:29,0:29:87.23:0,87,1199	0/0:33,0:33:96.29:0,96,1388	0/0:14,0:14:39.12:0,39,564	1/1:0,27:27:69.19:940,69,0	0/0:19,0:19:57.12:0,57,826	0/0:26,0:26:78.26:0,78,1163	0/0:31,0:31:93.28:0,93,1333	0/0:27,0:27:81.24:0,81,1153	0/0:36,0:35:99:0,108,1572	0/0:29,0:29:84.22:0,84,1212	0/0:21,0:21:63.13:0,63,850	0/0:19,0:19:54.18:0,54,808	0/0:38,0:38:99:0,108,1571	0/0:19,0:19:57.17:0,57,815	0/0:19,0:19:57.18:0,57,829	0/0:19,0:19:57.19:0,57,853	0/0:28,0:28:81.01:0,81,1130	0/0:25,0:25:69.21:0,69,980	0/0:29,0:29:87.19:0,87,1214	0/0:17,0:17:51.12:0,51,701
chr10	17887111	.	A	AAC	14674.17	PASS	AB=0.590;AC=35;AF=0.625;AN=56;BaseQRankSum=-15.492;DP=846;FS=0.336;HRun=0;HaplotypeScore=120.3609;InbreedingCoeff=0.7664;MQ=71.66;MQ0=11;MQRankSum=-0.966;QD=28.89;ReadPosRankSum=3.682;VQSLOD=6.4516;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:72.22:0,72,851	0/1:3,11:14:38:394,0,38	0/0:56,0:27:33:0,33,357	0/0:54,0:39:49.73:0,50,509	1/1:4,16:20:15.62:700,16,0	1/1:9,18:27:45.15:713,45,0	1/1:5,18:23:28.21:649,28,0	0/0:8,0:34:59.90:0,60,318	0/0:26,0:26:63.18:0,63,735	0/1:13,21:34:34.47:855,0,34	1/1:7,19:26:18.63:760,19,0	0/0:20,0:22:48.70:0,49,528	1/1:11,23:34:7.19:1068,7,0	1/1:10,16:27:48.16:746,48,0	1/1:5,25:30:36.69:1058,37,0	1/1:7,24:30:27.66:916,28,0	1/1:7,28:36:75.26:1189,75,0	1/1:6,23:30:25.71:869,26,0	0/0:11,0:29:10.27:0,10,144	0/0:5,0:28:51.13:0,51,251	0/0:7,0:45:71.02:0,71,349	1/1:7,19:26:39.13:618,39,0	1/1:8,16:25:51.17:795,51,0	1/1:7,22:29:12.06:648,12,0	1/1:3,17:21:42.14:666,42,0	0/1:9,19:29:3.50:784,0,4	1/1:10,23:32:30.67:960,31,0	1/1:2,9:11:18.06:285,18,0
chr10	17887466	.	GA	G	398.68	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=9.400;DP=657;FS=4.722;HRun=5;HaplotypeScore=84.9437;InbreedingCoeff=0.9046;MQ=79.64;MQ0=0;MQRankSum=0.616;QD=4.15;ReadPosRankSum=-0.631;VQSLOD=-0.5625;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,117,1582	0/0:9,0:9:27.09:0,27,369	0/0:17,0:17:51.15:0,51,675	0/0:16,0:17:9.90:0,10,396	0/0:21,0:21:60.20:0,60,821	0/0:30,0:30:87.29:0,87,1189	0/0:24,0:24:72.20:0,72,949	1/1:32,3:35:24.66:255,25,0	0/0:23,0:23:63.21:0,63,862	0/0:22,0:22:63.20:0,63,846	0/0:26,0:26:72.18:0,72,947	0/0:23,0:23:63.20:0,63,848	0/0:22,0:22:57.19:0,57,779	0/0:23,0:23:66.22:0,66,903	0/0:21,0:20:54.18:0,54,738	0/0:16,0:16:48.16:0,48,656	0/0:24,0:24:66.21:0,66,885	0/0:32,0:32:93.29:0,93,1255	1/1:17,0:17:10.90:68,11,0	1/1:23,1:24:0.88:95,1,0	1/1:20,0:20:29.30:126,29,0	0/0:23,0:23:63.21:0,63,861	0/0:16,0:16:48.16:0,48,651	0/0:34,0:34:96.32:0,96,1312	0/0:27,0:27:78.26:0,78,1067	0/0:33,0:33:96.31:0,96,1300	0/0:23,0:23:60.18:0,60,803	0/0:14,0:13:42.14:0,42,574
chr10	17887472	.	G	GA	1323.14	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=15.037;DP=669;FS=3.112;HRun=5;HaplotypeScore=88.6404;InbreedingCoeff=0.9997;MQ=82.43;MQ0=0;MQRankSum=-8.770;QD=12.60;ReadPosRankSum=-4.040;VQSLOD=1.7946;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,123,1473	0/0:10,0:10:27.08:0,27,324	0/0:21,0:21:57.17:0,57,676	0/0:19,0:19:40.88:0,41,447	0/0:24,0:24:72.21:0,72,848	0/0:30,0:30:84.26:0,84,1008	0/0:24,0:24:69.14:0,69,809	1/1:35,1:36:75.30:411,75,0	0/0:27,0:27:81.22:0,81,947	0/0:22,0:22:60.18:0,60,719	0/0:25,0:25:72.22:0,72,859	0/0:21,0:21:63.18:0,63,744	0/0:20,0:20:57.17:0,57,683	0/0:24,0:24:72.22:0,72,863	0/0:19,0:18:54.17:0,54,646	0/0:17,0:17:48.15:0,48,572	0/0:22,0:22:63.18:0,63,745	0/0:32,0:32:93.24:0,93,1098	1/1:18,2:20:47.29:339,47,0	1/1:23,1:24:55.12:357,55,0	1/1:22,3:25:54.82:377,55,0	0/0:20,0:20:57.17:0,57,684	0/0:17,0:17:48.13:0,48,562	0/0:34,0:34:99:0,99,1169	0/0:26,0:26:78.24:0,78,936	0/0:33,0:33:84.25:0,84,998	0/0:20,0:20:60.18:0,60,720	0/0:14,0:13:42.13:0,42,504
chr10	17887649	.	T	TTC	197.12	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-1.290;DP=540;FS=1.237;HRun=0;HaplotypeScore=98.4932;InbreedingCoeff=0.8036;MQ=84.36;MQ0=3;MQRankSum=1.630;QD=13.14;ReadPosRankSum=0.484;VQSLOD=3.5427;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:57.17:0,57,681	0/0:7,0:7:12.04:0,12,146	0/0:35,0:21:21.68:0,22,194	0/0:49,0:38:5.89:0,6,268	0/0:14,0:14:30.07:0,30,342	0/0:15,0:15:32.65:0,33,387	0/0:26,0:26:42.24:0,42,699	0/0:15,0:15:12.36:0,12,56	1/1:5,10:15:18.06:288,18,0	0/0:19,0:19:51.07:0,51,567	0/0:14,0:14:42.11:0,42,484	0/0:16,0:16:36.07:0,36,396	0/0:25,0:25:57.15:0,57,667	0/0:24,0:24:57.15:0,57,661	0/0:19,0:19:45.12:0,45,526	0/0:15,0:15:39.58:0,40,464	0/0:41,0:41:99:0,108,1275	0/0:22,0:22:60.03:0,60,670	0/0:18,0:18:19.54:0,20,88	0/0:14,0:14:26.04:0,26,126	0/0:23,0:23:29.72:0,30,142	0/0:13,0:13:30.07:0,30,341	0/0:10,0:10:21.05:0,21,243	0/0:21,0:21:45.13:0,45,535	0/0:7,0:7:15.03:0,15,168	0/0:16,0:16:36.09:0,36,409	0/0:15,0:15:39.12:0,39,473	0/0:10,0:10:12.04:0,12,146
chr10	17887659	.	CTCTCTCTT	C	3676.92	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=10.202;DP=546;FS=0.000;HRun=0;HaplotypeScore=147.2601;InbreedingCoeff=0.9855;MQ=80.31;MQ0=4;MQRankSum=-4.642;QD=53.29;ReadPosRankSum=-2.343;VQSLOD=2.5040;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:72.25:0,72,2938	0/0:6,0:6:15.04:0,15,562	0/0:38,0:23:54.05:0,54,962	0/0:48,0:34:37.60:0,38,1468	0/0:13,0:13:39.13:0,39,1461	0/0:17,0:17:48.16:0,48,1818	0/0:27,0:27:78.24:0,78,2913	1/1:1,14:15:39.04:694,39,0	0/0:15,0:15:27.56:0,28,811	0/0:20,0:20:60.20:0,60,2276	0/0:16,0:16:48.15:0,48,1819	0/0:20,0:20:60.18:0,60,1970	0/0:28,0:28:81.27:0,81,2992	0/0:27,0:27:78.23:0,78,2702	0/0:18,0:18:54.17:0,54,2067	0/0:17,0:17:51.13:0,51,1913	0/0:40,0:40:99:0,117,4887	0/0:21,0:21:63.22:0,63,2664	1/1:0,20:20:54.03:969,54,0	1/1:0,14:14:36.08:949,36,0	1/1:0,20:20:42.08:1065,42,0	0/0:13,0:13:38.94:0,39,1334	0/0:10,0:10:30.05:0,30,1004	0/0:18,0:18:51.18:0,51,2119	0/0:7,0:7:21.04:0,21,719	0/0:15,0:15:45.15:0,45,1727	0/0:15,0:15:42.14:0,42,1787	0/0:4,0:4:12.04:0,12,536
chr10	17889419	.	ACAGCTGCCATTCTTGTTG	A	1815.31	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=6.431;DP=449;FS=5.129;HRun=0;HaplotypeScore=212.1625;InbreedingCoeff=0.9105;MQ=79.89;MQ0=2;MQRankSum=-4.870;QD=41.26;ReadPosRankSum=-1.745;VQSLOD=2.2660;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:81.28:0,81,5902	0/0:5,0:5:12.04:0,12,1039	0/0:10,0:11:30.10:0,30,1573	0/0:14,0:14:42.14:0,42,2175	0/0:14,0:14:39.13:0,39,2917	0/0:12,0:12:36.12:0,36,2860	0/0:26,0:26:75.26:0,75,6016	1/1:13,1:14:3.01:155,3,0	0/0:22,0:22:60.21:0,60,4522	0/0:16,0:16:48.16:0,48,2923	0/0:8,0:8:21.07:0,21,1786	0/0:14,0:13:39.13:0,39,3041	0/0:17,0:17:41.65:0,42,3655	0/0:18,0:18:45.07:0,45,3616	0/0:24,0:24:72.25:0,72,6049	0/0:24,0:24:66.20:0,66,5284	0/0:19,0:17:45.15:0,45,3813	0/0:35,0:35:93.32:0,93,8004	1/1:3,4:7:12.02:377,12,0	1/1:5,9:14:21.07:949,21,0	1/1:2,7:9:11.90:478,12,0	0/0:14,0:14:33.11:0,33,2406	0/0:12,0:12:36.12:0,36,2367	0/0:28,0:28:72.25:0,72,5687	0/0:13,0:13:39.13:0,39,3030	0/0:9,0:9:24.08:0,24,1732	0/0:18,0:18:48.16:0,48,4084	0/0:5,0:5:12.04:0,12,1051
chr10	17890817	.	TC	T	212.50	PASS	AC=4;AF=0.118;AN=34;BaseQRankSum=3.647;DP=273;FS=0.000;HRun=10;HaplotypeScore=26.4542;InbreedingCoeff=0.3996;MQ=19.48;MQ0=175;MQRankSum=0.378;QD=9.24;ReadPosRankSum=0.281;VQSLOD=0.5561;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	0/0:2,0:2:6.02:0,6,66	./.	./.	0/0:5,0:4:3.01:0,3,33	./.	0/0:10,1:2:6.01:0,6,64	./.	./.	0/0:12,0:9:18.05:0,18,199	0/0:7,0:7:6.02:0,6,66	1/1:3,9:3:3:26,3,0	0/0:8,0:3:3.01:0,3,33	0/0:13,0:6:9.02:0,9,99	0/0:10,0:3:3.01:0,3,33	0/0:11,0:4:3.01:0,3,33	./.	./.	./.	1/1:2,9:11:32.99:284,33,0	./.	0/0:7,0:7:9.02:0,9,98	./.	0/0:10,2:1:3.01:0,3,33	0/0:10,0:10:8.69:0,9,98	0/0:9,0:7:15.04:0,15,166	0/0:9,2:3:0.89:0,1,2	0/0:9,0:6:9.01:0,9,91
chr10	17891813	.	TC	T	215.23	PASS	AB=0.933;AC=6;AF=0.250;AN=24;BaseQRankSum=2.919;DP=299;FS=0.000;HRun=10;HaplotypeScore=27.9502;InbreedingCoeff=0.2797;MQ=18.23;MQ0=206;MQRankSum=-0.154;QD=5.52;ReadPosRankSum=0.836;VQSLOD=-0.2707;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	0/0:8,0:8:14.96:0,15,139	./.	./.	0/0:12,1:13:9.02:0,9,94	./.	./.	./.	./.	0/1:8,0:5:7.55:8,0,57	1/1:5,2:7:2.99:26,3,0	./.	0/0:9,0:1:0:0,0,0	0/0:11,2:1:3.01:0,3,31	./.	./.	./.	./.	./.	1/1:1,10:11:29.99:260,30,0	./.	0/0:12,1:13:9.02:0,9,95	0/1:11,2:8:20.03:20,0,25	./.	0/0:14,0:14:15:0,15,152	0/0:10,0:2:3.01:0,3,33	0/0:7,0:1:3.01:0,3,33	./.
chr10	17893794	.	C	CTA	10213.25	PASS	AB=0.974;AC=40;AF=0.714;AN=56;BaseQRankSum=-12.114;DP=483;FS=4.834;HRun=0;HaplotypeScore=63.6945;InbreedingCoeff=0.8237;MQ=72.44;MQ0=4;MQRankSum=0.611;QD=30.13;ReadPosRankSum=4.171;VQSLOD=6.5581;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:46.58:0,47,584	1/1:1,8:9:24.08:399,24,0	0/0:13,0:11:11.86:0,12,107	0/0:13,0:13:11.89:0,12,117	1/1:7,18:24:16.32:788,16,0	1/1:2,18:20:51.17:848,51,0	1/1:5,6:11:9.03:150,9,0	0/0:39,0:39:68.94:0,69,488	0/0:17,0:17:30.10:0,30,379	1/1:5,8:13:27.07:409,27,0	1/1:4,14:17:36.12:565,36,0	0/1:17,1:18:16.78:17,0,344	1/1:1,9:10:21.07:349,21,0	1/1:3,11:15:24.08:399,24,0	1/1:8,9:17:15.05:249,15,0	1/1:5,7:12:15.05:249,15,0	1/1:3,21:24:54.18:898,54,0	1/1:1,26:27:69.24:1144,69,0	0/0:18,0:18:44.74:0,45,342	0/0:22,0:22:28.17:0,28,224	0/1:12,0:12:1.94:2,0,118	1/1:5,3:8:9.03:150,9,0	1/1:2,11:13:30.10:483,30,0	1/1:3,7:8:18.06:299,18,0	1/1:5,22:27:60.20:987,60,0	1/1:3,17:20:51.17:832,51,0	1/1:1,13:13:20.97:349,21,0	1/1:3,13:16:39.13:648,39,0
chr10	17894405	.	TA	T	1150.84	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=9.845;DP=585;FS=7.073;HRun=10;HaplotypeScore=60.0843;InbreedingCoeff=0.8582;MQ=70.77;MQ0=1;MQRankSum=1.033;QD=13.54;ReadPosRankSum=-2.276;VQSLOD=2.8146;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,109,1398	0/0:11,0:12:35.93:0,36,379	0/1:20,0:18:6.87:7,0,103	0/0:15,0:13:5.23:0,5,75	0/0:25,1:26:37.13:0,37,638	0/0:21,0:22:59.98:0,60,636	0/0:21,0:21:29.95:0,30,510	1/1:8,13:21:38.96:335,39,0	0/0:20,0:20:54.13:0,54,588	0/0:27,0:27:69.15:0,69,732	0/0:20,0:20:54.14:0,54,590	0/0:14,0:14:33.09:0,33,365	0/0:20,0:20:51.12:0,51,552	0/0:24,0:25:68.99:0,69,727	0/0:22,0:22:54.12:0,54,580	0/0:20,0:20:51.11:0,51,546	0/0:32,0:34:96.01:0,96,996	0/0:8,0:8:24.06:0,24,266	1/1:2,15:17:44.36:373,44,0	1/1:1,16:17:47.99:416,48,0	1/1:3,7:10:20.99:182,21,0	0/0:19,0:19:51.11:0,51,546	0/0:11,0:11:30.08:0,30,332	0/0:30,0:31:84.01:0,84,901	0/0:18,2:20:28.09:0,28,530	0/0:32,0:31:84.21:0,84,917	0/0:21,0:21:57.12:0,57,610	0/0:13,0:13:39.04:0,39,394
chr10	17896745	.	G	GAGAC	22963.95	PASS	AB=0.754;AC=45;AF=0.804;AN=56;BaseQRankSum=-11.983;DP=919;FS=2.538;HRun=0;HaplotypeScore=138.0087;InbreedingCoeff=0.8702;MQ=64.99;MQ0=5;MQRankSum=1.085;QD=31.16;ReadPosRankSum=5.131;VQSLOD=4.9988;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:90.26:0,90,1378	1/1:3,11:14:24.08:577,24,0	0/0:34,0:27:35.10:0,35,470	0/0:52,0:43:37.48:0,37,517	1/1:4,20:26:54.19:1265,54,0	1/1:6,14:21:24.08:567,24,0	1/1:12,25:38:38.32:950,38,0	0/1:31,13:46:22.43:562,0,22	0/0:25,0:25:45.14:0,45,701	1/1:10,22:33:69.22:1524,69,0	1/1:9,17:28:33.11:778,33,0	0/0:21,0:21:54.17:0,54,855	1/1:11,16:28:30.10:727,30,0	1/1:5,32:38:72.25:1712,72,0	1/1:11,31:42:63.22:1528,63,0	1/1:8,30:38:45.15:1088,45,0	1/1:9,25:34:40.90:1021,41,0	1/1:12,13:26:15.05:366,15,0	1/1:16,15:29:45.07:907,45,0	1/1:9,20:31:45.07:982,45,0	1/1:16,45:63:31.72:1853,32,0	1/1:6,16:24:33.03:724,33,0	1/1:8,20:29:35.70:860,36,0	1/1:12,33:45:69.13:1658,69,0	1/1:11,16:27:19.13:719,19,0	1/1:11,20:33:66.16:1354,66,0	1/1:9,23:33:42.14:1024,42,0	1/1:2,5:7:9.03:219,9,0
chr10	17898565	.	T	TTC	165.28	PASS	AB=0.781;AC=2;AF=0.036;AN=56;BaseQRankSum=3.843;DP=476;FS=17.198;HRun=0;HaplotypeScore=58.6092;InbreedingCoeff=-0.0383;MQ=73.39;MQ0=0;MQRankSum=3.829;QD=8.70;ReadPosRankSum=-2.520;VQSLOD=1.1755;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:66.20:0,66,1047	0/0:4,0:4:12.04:0,12,195	0/1:4,2:6:99:110,0,100	0/1:10,3:13:99:144,0,357	0/0:15,0:15:45.15:0,45,734	0/0:19,0:19:57.18:0,57,906	0/0:12,0:12:36.07:0,36,513	0/0:35,0:35:99:0,105,1667	0/0:22,0:22:66.21:0,66,1048	0/0:16,0:16:48.15:0,48,759	0/0:13,0:13:36.11:0,36,563	0/0:16,0:16:48.16:0,48,780	0/0:19,0:19:54.18:0,54,876	0/0:16,0:16:45.15:0,45,734	0/0:23,0:23:66.23:0,66,1077	0/0:13,0:13:36.12:0,36,587	0/0:24,0:24:66.21:0,66,1048	0/0:22,0:22:66.23:0,66,1076	0/0:17,0:17:45.15:0,45,729	0/0:12,0:12:36.12:0,36,587	0/0:16,0:16:48.16:0,48,783	0/0:9,0:9:27.06:0,27,412	0/0:10,0:10:27.09:0,27,439	0/0:13,0:13:39.09:0,39,598	0/0:18,0:18:54.16:0,54,855	0/0:31,0:31:84.28:0,84,1347	0/0:29,0:29:84.27:0,84,1343	0/0:10,0:10:30.10:0,30,489
chr10	17898847	.	CT	C	115.62	PASS	AB=0.764;AC=9;AF=0.205;AN=44;BaseQRankSum=0.356;DP=74;FS=2.770;HRun=1;HaplotypeScore=11.9052;InbreedingCoeff=0.1881;MQ=67.70;MQ0=0;MQRankSum=-0.334;QD=6.42;ReadPosRankSum=0.133;VQSLOD=0.4901;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:5:12.04:0,12,191	0/0:2,0:2:3.01:0,3,47	0/0:4,0:3:7.52:0,8,54	0/0:2,0:1:3.01:0,3,34	./.	0/0:3,0:3:8.97:0,9,93	0/0:1,0:1:3.01:0,3,48	1/1:2,0:2:6.01:67,6,0	0/0:2,0:2:6.02:0,6,96	0/1:2,1:3:32.73:33,0,66	./.	0/0:2,0:2:6.02:0,6,93	0/0:4,0:3:9.03:0,9,142	0/0:2,0:2:5.99:0,6,70	0/0:6,0:6:18.02:0,18,259	./.	0/0:5,0:5:11.86:0,12,167	./.	1/1:1,1:1:3.01:42,3,0	./.	1/1:0,2:2:3.01:42,3,0	./.	0/0:2,0:2:3.01:0,3,48	0/0:7,0:7:20.96:0,21,286	0/1:1,1:2:33.47:33,0,39	0/1:6,1:7:20.69:21,0,265	0/0:6,0:6:14.99:0,15,147	0/0:1,0:1:3.01:0,3,48
chr10	17900663	.	T	TATATATAC	4540.04	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-8.219;DP=286;FS=5.799;HRun=0;HaplotypeScore=67.5687;InbreedingCoeff=0.7430;MQ=64.00;MQ0=1;MQRankSum=-2.495;QD=76.95;ReadPosRankSum=-5.496;VQSLOD=2.7517;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:36.12:0,36,870	0/0:4,0:4:12.04:0,12,309	0/0:10,0:7:10.26:0,10,63	0/0:13,0:8:1.67:0,2,40	0/0:8,0:8:21.05:0,21,514	0/0:17,0:17:39.12:0,39,1006	0/0:5,0:5:6.02:0,6,164	1/1:4,30:41:99:3463,114,0	0/0:9,0:9:21.07:0,21,573	0/0:8,0:8:15.03:0,15,247	0/0:7,0:7:21.07:0,21,544	0/0:3,0:3:9.02:0,9,189	0/0:6,0:6:12.04:0,12,327	0/0:3,0:3:9.01:0,9,188	0/0:7,0:7:18.05:0,18,433	0/0:6,0:6:15.02:0,15,277	0/0:19,0:19:42.14:0,42,1041	0/0:20,0:20:57.17:0,57,1409	1/1:1,8:10:27.06:771,27,0	1/1:0,4:5:9.03:235,9,0	1/1:0,2:2:3.01:71,3,0	0/0:2,0:2:3.01:0,3,82	0/0:8,0:8:21.07:0,21,569	0/0:6,0:6:18.04:0,18,433	0/0:20,0:20:48.15:0,48,1234	0/0:8,0:8:18.05:0,18,437	0/0:14,0:14:33.10:0,33,839	0/0:10,0:10:30.10:0,30,786
chr10	17901419	.	TA	T	10266.39	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-3.095;DP=544;FS=0.000;HRun=10;HaplotypeScore=62.8561;InbreedingCoeff=0.8112;MQ=70.22;MQ0=0;MQRankSum=-1.927;QD=19.37;ReadPosRankSum=1.847;VQSLOD=5.6288;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,21:22:59.99:521,60,0	1/1:1,6:7:14.99:130,15,0	0/0:8,0:9:8.23:0,8,70	0/0:5,0:4:0:0,0,0	1/1:4,20:24:53.97:469,54,0	1/1:1,21:22:59.99:521,60,0	1/1:3,7:10:20.99:182,21,0	1/1:2,0:25:43.72:128,44,0	1/1:1,15:16:41.99:365,42,0	1/1:3,30:34:92.01:787,92,0	1/1:4,20:24:37.26:463,37,0	1/1:1,12:13:35.99:313,36,0	1/1:3,18:21:47.86:417,48,0	1/1:2,16:18:38.98:339,39,0	1/1:1,16:17:47.99:417,48,0	1/1:2,19:21:44.99:391,45,0	1/1:0,24:24:65.99:573,66,0	1/1:1,24:25:59.98:521,60,0	1/1:3,0:12:18.33:54,18,0	1/1:2,0:27:50.93:150,51,0	1/1:2,0:15:22.41:66,22,0	1/1:2,26:28:77.98:677,78,0	1/1:2,19:21:56.99:495,57,0	1/1:0,12:12:35.99:313,36,0	1/1:1,25:26:65.98:573,66,0	1/1:5,23:28:68.94:591,69,0	1/1:3,16:20:41.03:345,41,0	1/1:0,18:18:53.99:469,54,0
chr10	17902426	.	TGGAGCGCAGC	T	1504.11	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=0.349;DP=490;FS=0.827;HRun=0;HaplotypeScore=132.8710;InbreedingCoeff=0.8718;MQ=88.36;MQ0=33;MQRankSum=-1.412;QD=39.58;ReadPosRankSum=-1.149;VQSLOD=2.9990;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:81.28:0,81,1949	0/0:4,0:3:9.03:0,9,225	0/0:12,0:11:29.89:0,30,534	0/0:40,0:38:66.03:0,66,747	0/0:11,0:10:27.09:0,27,634	0/0:14,0:13:39.13:0,39,974	0/0:40,0:32:87.18:0,87,2050	1/1:3,8:8:24.05:462,24,0	0/0:14,0:13:35.78:0,36,841	0/0:23,0:17:51.13:0,51,1173	0/0:5,1:4:3.01:0,3,75	0/0:21,0:19:57.18:0,57,1342	0/0:21,0:18:51.18:0,51,1252	0/0:26,0:22:63.22:0,63,1451	0/0:11,0:8:24.08:0,24,599	0/0:7,0:7:21.07:0,21,478	0/0:32,0:26:75.26:0,75,1820	0/0:24,0:20:60.21:0,60,1449	1/1:4,2:2:6.02:122,6,0	1/1:0,5:5:6.02:180,6,0	1/1:16,0:13:33.11:886,33,0	0/0:13,0:8:24.08:0,24,568	0/0:10,0:10:27.09:0,27,650	0/0:33,0:27:75.26:0,75,1789	0/0:18,0:15:42.14:0,42,979	0/0:18,0:13:30.10:0,30,749	0/0:7,0:6:18.06:0,18,416	0/0:16,0:15:42.14:0,42,992
chr10	17902436	.	C	CGGAGT	1641.03	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=1.882;DP=533;FS=4.025;HRun=0;HaplotypeScore=113.7523;InbreedingCoeff=0.8867;MQ=95.92;MQ0=14;MQRankSum=-0.081;QD=39.07;ReadPosRankSum=-0.784;VQSLOD=3.0146;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:95.13:0,95,1841	0/0:5,0:4:12.03:0,12,214	0/0:17,0:16:38.69:0,39,564	0/0:48,0:47:40.34:0,40,651	0/0:14,0:13:28.86:0,29,548	0/0:14,0:13:39.13:0,39,818	0/0:41,0:35:93.32:0,93,1835	1/1:10,0:8:24.05:462,24,0	0/0:14,0:13:36.12:0,36,717	0/0:28,0:25:66.10:0,66,1195	0/0:5,0:5:3.01:0,3,63	0/0:25,0:23:66.11:0,66,1188	0/0:20,0:20:51.17:0,51,1049	0/0:25,0:24:69.22:0,69,1311	0/0:12,0:11:30.10:0,30,602	0/0:9,0:9:27.09:0,27,503	0/0:35,0:30:78.27:0,78,1593	0/0:23,0:21:60.21:0,60,1218	1/1:3,0:2:6.02:122,6,0	1/1:5,0:5:6.91:181,7,0	1/1:2,17:22:33.11:1022,33,0	0/0:11,0:10:24.08:0,24,470	0/0:13,0:13:30.02:0,30,569	0/0:34,0:32:86.36:0,86,1658	0/0:19,0:19:47.75:0,48,875	0/0:19,0:19:40.40:0,40,759	0/0:9,0:9:24.06:0,24,412	0/0:16,0:15:45.12:0,45,899
chr10	17905769	.	C	CAA	2574.03	PASS	AB=0.886;AC=42;AF=0.778;AN=54;BaseQRankSum=0.616;DP=434;FS=0.000;HRun=17;HaplotypeScore=75.3118;InbreedingCoeff=-0.1026;MQ=47.36;MQ0=20;MQRankSum=-1.425;QD=6.20;ReadPosRankSum=-1.871;VQSLOD=-0.6852;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,2:27:19.38:144,19,0	1/1:3,4:6:7.10:53,7,0	0/0:17,0:4:1.99:0,2,8	0/1:6,0:4:3.38:14,0,3	1/1:11,9:20:19.01:230,19,0	1/1:5,6:16:20.41:206,20,0	0/1:9,2:11:33.49:101,0,33	1/1:39,0:38:3.89:70,4,0	0/1:11,0:12:6.20:6,0,37	0/1:14,0:18:2.02:96,0,2	1/1:5,11:17:3.94:255,4,0	0/1:13,0:14:5.04:64,0,5	1/1:5,7:13:5.98:56,6,0	1/1:4,0:4:2.98:21,3,0	0/1:11,0:11:1.16:63,0,1	0/1:8,0:13:9.63:54,0,10	1/1:13,1:15:18.99:85,19,0	1/1:4,3:7:2.37:9,2,0	1/1:23,0:21:14.37:44,14,0	1/1:17,0:17:8.58:30,9,0	./.	0/1:7,4:11:9.82:51,0,10	1/1:8,10:20:22.64:186,23,0	1/1:6,0:5:2.97:20,3,0	1/1:13,4:19:33.58:321,34,0	1/1:25,2:27:24.37:334,24,0	0/1:16,0:13:5.30:98,0,5	0/1:15,1:13:6.63:90,0,7
chr10	17907273	.	T	TA	3573.96	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-14.127;DP=550;FS=0.422;HRun=6;HaplotypeScore=49.3655;InbreedingCoeff=0.9632;MQ=66.82;MQ0=0;MQRankSum=0.073;QD=34.36;ReadPosRankSum=-3.204;VQSLOD=2.0804;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:39.08:0,39,398	0/0:4,0:4:12.03:0,12,122	0/0:9,0:8:21.48:0,21,201	0/0:6,0:6:6.27:0,6,125	0/0:45,0:45:99:0,123,1248	0/0:16,0:16:48.11:0,48,490	0/0:13,0:13:36.08:0,36,367	1/1:3,28:31:84.22:1027,84,0	0/0:14,0:14:39.07:0,39,391	0/0:24,0:24:69.16:0,69,704	0/0:31,0:31:87.19:0,87,886	0/0:17,0:17:48.09:0,48,483	0/0:25,0:25:66.15:0,66,673	0/0:12,0:12:33.06:0,33,330	0/0:19,0:19:51.11:0,51,520	0/0:15,0:15:39.09:0,39,398	0/0:23,0:23:69.12:0,69,693	0/0:19,0:19:57.13:0,57,582	1/1:0,26:26:78.25:980,78,0	1/1:1,24:25:72.19:888,72,0	1/1:3,19:22:54.17:679,54,0	0/0:11,0:11:33.07:0,33,336	0/0:20,0:20:57.13:0,57,582	0/0:12,0:12:33.08:0,33,337	0/0:27,0:27:69.15:0,69,704	0/0:19,0:19:54.12:0,54,551	0/0:29,0:29:84.19:0,84,857	0/0:18,0:18:48.10:0,48,490
chr10	17908746	.	CAG	C	335.71	PASS	AB=0.942;AC=12;AF=0.222;AN=54;BaseQRankSum=7.445;DP=643;FS=2.444;HRun=0;HaplotypeScore=104.7633;InbreedingCoeff=0.7389;MQ=73.17;MQ0=5;MQRankSum=-2.630;QD=2.32;ReadPosRankSum=1.342;VQSLOD=1.8600;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:28:8.19:37,8,0	0/0:10,0:10:30.10:0,30,477	0/0:41,0:26:26.09:0,26,303	0/0:50,0:31:21.17:0,21,240	0/0:26,0:26:60.12:0,60,994	0/0:22,1:23:9.09:0,9,547	0/0:19,0:19:39.13:0,39,621	./.	1/1:9,15:24:27.08:324,27,0	0/0:28,0:26:51.17:0,51,808	0/0:18,2:20:42.61:0,43,644	1/1:15,0:15:5.60:26,6,0	0/0:24,0:24:57.19:0,57,886	0/0:23,0:23:54.18:0,54,843	0/0:26,1:27:18.22:0,18,778	0/0:20,1:21:3.14:0,3,513	0/0:34,1:35:54.81:0,55,1307	0/0:12,0:12:27.09:0,27,428	1/1:18,0:17:11.19:53,11,0	1/1:23,0:23:8.39:39,8,0	0/1:14,0:14:0:0,0,0	0/1:20,3:23:14.74:15,0,742	0/0:16,0:16:19.48:0,19,324	0/0:27,2:29:24.26:0,24,844	0/0:22,0:22:36.17:0,36,657	0/0:28,0:28:78.24:0,78,1186	0/0:21,1:22:9.15:0,9,580	0/0:9,0:9:27.09:0,27,428
chr10	17908758	.	GAGAGAGAGACAGAGAGAGAGAC	G	1723.82	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=8.053;DP=647;FS=0.651;HRun=0;HaplotypeScore=321.0018;InbreedingCoeff=0.9545;MQ=70.41;MQ0=6;MQRankSum=-2.490;QD=28.73;ReadPosRankSum=-2.923;VQSLOD=1.2882;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:28:18.06:0,18,604	0/0:12,0:12:36.11:0,36,2956	0/0:44,0:23:35.82:0,36,887	0/0:66,0:33:40.39:0,40,1349	0/0:28,0:28:50.72:0,51,5255	0/0:25,0:25:57.17:0,57,3863	0/0:17,0:17:48.15:0,48,4258	1/1:3,0:3:8.90:60,9,0	0/0:18,0:18:30.10:0,30,2367	0/0:26,0:24:60.21:0,60,4317	0/0:25,0:25:54.17:0,54,3942	0/0:2,0:15:9.03:0,9,277	0/0:21,0:21:63.11:0,63,5239	0/0:25,0:25:66.23:0,66,5281	0/0:22,0:22:54.17:0,54,4871	0/0:19,0:19:48.16:0,48,3858	0/0:38,0:38:99:0,108,8104	0/0:12,0:12:30.10:0,30,2559	1/1:5,16:20:53.66:992,54,0	1/1:3,20:23:23.84:726,24,0	1/1:13,0:13:11.98:99,12,0	0/0:25,0:25:66.19:0,66,5031	0/0:12,0:12:30.10:0,30,2743	0/0:23,0:23:57.19:0,57,4925	0/0:24,0:24:32.24:0,32,4478	0/0:30,0:30:84.28:0,84,7373	0/0:23,0:23:51.14:0,51,3796	0/0:9,0:9:27.07:0,27,2483
chr10	17910441	.	T	TGA	1434.63	PASS	AB=0.962;AC=35;AF=0.795;AN=44;BaseQRankSum=-1.428;DP=500;FS=0.000;HRun=0;HaplotypeScore=91.5602;InbreedingCoeff=0.1278;MQ=67.83;MQ0=4;MQRankSum=-0.900;QD=4.26;ReadPosRankSum=0.776;VQSLOD=2.3489;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	1/1:7,0:7:3.01:31,3,0	./.	0/0:33,0:9:1.18:0,1,4	./.	0/1:15,0:15:23.43:33,0,23	1/1:16,4:21:5.88:88,6,0	0/1:23,0:23:0:0,0,0	./.	1/1:21,0:21:9.01:94,9,0	1/1:16,0:16:6.02:77,6,0	0/0:6,0:6:2.99:0,3,23	1/1:13,0:13:11.34:96,11,0	1/1:20,0:20:11.47:117,11,0	0/1:16,5:21:25.94:38,0,26	1/1:21,0:21:15.02:170,15,0	1/1:11,8:19:3.48:45,3,0	1/1:7,4:10:5.58:74,6,0	./.	./.	1/1:16,0:16:2.75:22,3,0	1/1:13,5:18:3.01:44,3,0	0/1:21,0:21:0.01:0,0,0	0/1:16,0:16:19.97:95,0,20	1/1:15,0:15:20.43:243,20,0	1/1:14,0:14:11.71:132,12,0	1/1:14,0:20:3.47:27,3,0	1/1:9,0:9:11.98:120,12,0
chr10	17911082	.	A	AC	4799.78	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-2.413;DP=551;FS=7.944;HRun=1;HaplotypeScore=55.6172;InbreedingCoeff=0.9968;MQ=82.09;MQ0=0;MQRankSum=-0.793;QD=43.24;ReadPosRankSum=-0.299;VQSLOD=4.4310;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:45.15:0,45,584	0/0:8,0:8:24.08:0,24,312	0/0:16,0:17:47.10:0,47,550	0/0:13,0:13:39.12:0,39,489	0/0:25,0:25:75.24:0,75,974	0/0:15,0:15:45.15:0,45,584	0/0:15,0:15:42.14:0,42,545	1/1:0,31:31:93.31:1392,93,0	0/0:22,0:22:66.21:0,66,854	0/0:25,0:25:75.24:0,75,974	0/0:19,0:19:54.18:0,54,701	0/0:17,0:17:48.16:0,48,623	0/0:19,0:19:57.19:0,57,740	0/0:23,0:23:69.21:0,69,881	0/0:20,0:20:60.20:0,60,779	0/0:16,0:16:48.14:0,48,609	0/0:18,0:18:54.18:0,54,701	0/0:6,0:6:18.06:0,18,234	1/1:1,26:27:78.26:1163,78,0	1/1:0,37:37:99:1616,108,0	1/1:0,16:16:42.14:630,42,0	0/0:23,0:23:69.22:0,69,896	0/0:22,0:22:66.20:0,66,843	0/0:10,0:10:27.09:0,27,351	0/0:25,0:25:75.24:0,75,974	0/0:22,0:22:66.21:0,66,857	0/0:29,0:29:78.25:0,78,1011	0/0:15,0:15:39.11:0,39,491
chr10	17911238	.	CCCTTGGGGAAAAGCACAA	C	5727.47	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=11.132;DP=516;FS=0.568;HRun=0;HaplotypeScore=243.9226;InbreedingCoeff=0.9445;MQ=79.16;MQ0=0;MQRankSum=-5.152;QD=80.67;ReadPosRankSum=-0.865;VQSLOD=4.0891;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:57.20:0,57,4537	0/0:12,0:12:36.12:0,36,3045	0/0:20,0:20:29.77:0,30,3522	0/0:12,0:12:27.09:0,27,1480	0/0:26,0:26:78.27:0,78,5780	0/0:22,0:22:63.22:0,63,4836	0/0:16,0:16:48.16:0,48,3667	1/1:9,13:22:36.10:1167,36,0	0/0:20,0:20:60.21:0,60,5223	0/0:22,0:22:63.22:0,63,4777	0/0:15,0:15:45.15:0,45,3721	0/0:14,0:14:42.14:0,42,3390	0/0:25,0:25:75.26:0,75,6109	0/0:19,0:19:57.20:0,57,4708	0/0:26,0:26:72.22:0,72,5544	0/0:16,0:16:48.16:0,48,4179	0/0:20,0:19:57.17:0,57,4304	0/0:15,0:15:42.14:0,42,3314	1/1:6,14:20:42.13:1885,42,0	1/1:5,18:23:54.18:2523,54,0	1/1:3,3:6:3.01:153,3,0	0/0:19,0:19:51.18:0,51,4352	0/0:16,0:16:42.14:0,42,3428	0/0:5,0:5:15.05:0,15,1142	0/0:22,0:22:60.21:0,60,4702	0/0:23,0:23:69.24:0,69,5416	0/0:31,0:31:90.30:0,90,6635	0/0:10,0:10:30.10:0,30,2492
chr10	17911808	.	G	GA	3433.79	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-12.318;DP=605;FS=1.980;HRun=3;HaplotypeScore=56.1717;InbreedingCoeff=0.9982;MQ=79.34;MQ0=0;MQRankSum=0.275;QD=38.58;ReadPosRankSum=-2.714;VQSLOD=2.8971;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:57.15:0,57,671	0/0:7,0:7:21.06:0,21,252	0/0:18,0:18:44.55:0,45,512	0/0:12,0:12:26.92:0,27,305	0/0:20,0:20:57.16:0,57,671	0/0:13,0:13:30.09:0,30,360	0/0:12,0:12:33.10:0,33,396	1/1:2,29:31:87.29:1202,87,0	0/0:21,0:21:54.17:0,54,647	0/0:24,0:24:69.21:0,69,828	0/0:23,0:23:60.18:0,60,720	0/0:26,0:26:78.24:0,78,935	0/0:19,0:19:54.16:0,54,648	0/0:26,0:26:78.24:0,78,936	0/0:30,0:30:81.25:0,81,971	0/0:24,0:24:72.22:0,72,863	0/0:27,0:27:78.21:0,78,912	0/0:21,0:21:60.18:0,60,720	1/1:4,19:23:63.19:845,63,0	1/1:0,24:24:69.23:966,69,0	1/1:1,10:11:30.10:420,30,0	0/0:17,0:17:51.16:0,51,612	0/0:18,0:18:51.14:0,51,599	0/0:21,0:21:63.19:0,63,755	0/0:34,0:34:99:0,99,1177	0/0:25,0:25:66.20:0,66,792	0/0:31,0:31:84.26:0,84,1007	0/0:22,0:22:66.20:0,66,792
chr10	17911912	.	GA	G	6501.81	PASS	AB=0.723;AC=44;AF=0.786;AN=56;BaseQRankSum=6.509;DP=500;FS=0.507;HRun=12;HaplotypeScore=53.3472;InbreedingCoeff=0.7657;MQ=70.07;MQ0=0;MQRankSum=-0.862;QD=15.97;ReadPosRankSum=5.571;VQSLOD=5.4053;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,18:29:61.90:441,62,0	1/1:4,4:9:13.97:99,14,0	0/0:14,0:13:11.90:0,12,99	0/1:6,1:7:8.01:8,0,100	1/1:6,14:22:45.89:337,46,0	1/1:3,13:16:29.87:232,30,0	1/1:2,9:13:27.98:198,28,0	0/0:33,1:34:36.87:0,37,545	1/1:4,11:17:36.90:267,37,0	1/1:5,13:20:40.87:308,41,0	1/1:3,14:18:7.67:247,8,0	1/1:1,11:14:33.96:244,34,0	1/1:4,13:17:34.88:261,35,0	1/1:1,17:18:44.82:348,45,0	1/1:5,13:19:37.87:284,38,0	1/1:3,20:23:50.77:395,51,0	1/1:3,15:18:41.81:325,42,0	1/1:2,21:23:59.75:463,60,0	0/0:18,0:19:41.91:0,42,406	0/0:21,0:21:45.08:0,45,450	0/0:5,0:5:9.02:0,9,91	0/1:4,11:16:19.99:220,0,20	1/1:1,20:21:53.79:418,54,0	1/1:1,8:10:22.95:168,23,0	1/1:4,14:18:20.20:300,20,0	1/1:4,20:25:61.78:467,62,0	1/1:3,14:18:31.91:238,32,0	1/1:2,14:16:29.87:232,30,0
chr10	17912339	.	CT	C	1978.21	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=9.657;DP=534;FS=1.628;HRun=3;HaplotypeScore=49.3259;InbreedingCoeff=0.9989;MQ=76.48;MQ0=0;MQRankSum=0.242;QD=28.26;ReadPosRankSum=-2.391;VQSLOD=2.2745;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:57.06:0,57,735	0/0:13,0:13:39.12:0,39,543	0/0:13,0:13:26.68:0,27,471	0/0:10,0:10:29.97:0,30,328	0/0:25,0:25:75.23:0,75,1043	0/0:27,0:27:81.27:0,81,1162	0/0:15,0:15:45.14:0,45,631	1/1:2,16:18:48.08:523,48,0	0/0:12,0:12:30.08:0,30,396	0/0:25,0:25:72.23:0,72,1007	0/0:26,0:26:75.24:0,75,1048	0/0:13,0:13:39.12:0,39,545	0/0:16,0:16:45.12:0,45,597	0/0:11,0:11:33.11:0,33,475	0/0:24,0:24:66.19:0,66,897	0/0:17,0:17:44.56:0,45,650	0/0:30,0:30:87.20:0,87,1138	0/0:11,0:11:33.08:0,33,452	1/1:3,16:19:48.06:539,48,0	1/1:1,21:22:60.19:743,60,0	1/1:0,11:11:27.08:334,27,0	0/0:13,0:13:39.12:0,39,538	0/0:25,0:25:75.25:0,75,1079	0/0:12,0:12:36.10:0,36,482	0/0:22,0:22:66.22:0,66,934	0/0:31,0:31:90.30:0,90,1295	0/0:27,0:26:81.22:0,81,1108	0/0:27,0:27:81.27:0,81,1165
chr10	17912971	.	CTTATT	C	2151.41	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=1.866;DP=305;FS=4.506;HRun=0;HaplotypeScore=75.2274;InbreedingCoeff=0.7961;MQ=69.58;MQ0=0;MQRankSum=-2.883;QD=27.94;ReadPosRankSum=-3.074;VQSLOD=2.1058;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:20.54:0,21,277	0/0:4,0:4:12.02:0,12,186	0/0:13,0:10:27.04:0,27,432	0/0:8,0:6:12.04:0,12,387	0/0:6,0:6:18.05:0,18,474	0/0:11,0:11:33.11:0,33,949	0/0:9,0:9:27.08:0,27,746	1/1:33,0:31:60.36:962,60,0	0/1:7,0:7:53.37:98,0,53	0/0:10,0:10:27.08:0,27,679	0/0:8,0:8:24.07:0,24,669	0/0:8,0:8:12.46:0,12,154	0/0:3,0:3:9.03:0,9,174	0/0:7,0:7:21.06:0,21,516	0/0:7,0:7:21.05:0,21,495	0/0:7,0:7:18.06:0,18,421	0/0:20,0:20:60.18:0,60,1500	0/0:18,0:18:45.14:0,45,1286	1/1:18,4:22:54.30:787,54,0	1/1:8,1:9:20.85:285,21,0	1/1:6,0:6:15.02:183,15,0	0/0:2,0:2:6.02:0,6,144	0/0:6,0:6:18.03:0,18,293	0/0:8,0:8:21.06:0,21,495	0/0:15,0:15:42.13:0,42,1250	0/0:11,0:11:26.70:0,27,741	0/0:12,0:12:33.10:0,33,973	0/0:26,0:26:66.18:0,66,1630
chr10	17912986	.	TTTA	T	1556.10	PASS	AB=0.964;AC=15;AF=0.268;AN=56;BaseQRankSum=6.939;DP=244;FS=4.997;HRun=0;HaplotypeScore=53.6633;InbreedingCoeff=0.2340;MQ=61.52;MQ0=2;MQRankSum=-6.111;QD=17.10;ReadPosRankSum=-4.045;VQSLOD=2.1725;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:8,0:8:5.67:6,0,183	0/1:3,0:3:34.33:34,0,35	0/1:9,0:5:1.88:2,0,80	0/0:11,0:6:1.74:0,2,49	0/0:7,0:7:9.03:0,9,132	0/0:12,0:12:2.29:0,2,451	0/0:7,0:7:18.01:0,18,204	1/1:5,20:23:57.19:893,57,0	0/0:6,1:7:9.56:0,10,63	0/0:6,0:6:6.56:0,7,267	0/0:8,0:8:18.06:0,18,270	0/0:3,0:3:6:0,6,68	1/1:2,0:2:3:25,3,0	0/1:5,1:6:32.52:33,0,142	0/1:5,0:5:4.60:5,0,206	0/1:5,0:5:52.27:52,0,161	0/0:18,0:18:39.09:0,39,557	0/0:16,0:16:39.13:0,39,652	1/1:5,8:12:28.63:409,29,0	1/1:4,3:7:15.04:216,15,0	0/0:1,2:3:2.04:0,2,6	0/0:2,0:2:5.69:0,6,56	0/0:3,0:3:3.01:0,3,46	0/0:4,0:4:9.03:0,9,132	0/0:16,0:16:19.18:0,19,631	0/1:7,1:8:41.72:42,0,307	0/0:11,0:11:27.09:0,27,390	0/0:19,0:19:21.16:0,21,634
chr10	17912989	.	A	ATTATTTTATT	4017.79	PASS	AB=1.000;AC=40;AF=0.952;AN=42;BaseQRankSum=-3.867;DP=245;FS=11.495;HRun=0;HaplotypeScore=76.6293;InbreedingCoeff=-0.1695;MQ=57.70;MQ0=3;MQRankSum=-0.757;QD=20.29;ReadPosRankSum=-3.262;VQSLOD=0.3186;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,1:7:3.01:110,3,0	1/1:1,0:3:6.02:193,6,0	./.	./.	1/1:2,3:5:3.01:146,3,0	1/1:8,4:13:9.03:445,9,0	./.	1/1:25,0:23:18.49:181,18,0	0/1:7,0:7:44.29:44,0,70	1/1:3,4:7:9.03:280,9,0	1/1:6,3:9:3.01:142,3,0	./.	1/1:1,0:2:3.01:97,3,0	1/1:5,0:5:3.01:56,3,0	1/1:6,0:7:9.01:146,9,0	1/1:5,0:6:6.02:142,6,0	1/1:12,4:18:6.02:133,6,0	./.	0/1:13,0:11:78.62:79,0,177	1/1:6,0:7:3.01:48,3,0	./.	1/1:2,0:2:4.26:62,4,0	1/1:0,3:3:3.01:146,3,0	./.	1/1:9,7:16:15.05:738,15,0	1/1:8,0:9:12.01:239,12,0	1/1:8,3:13:9.03:445,9,0	1/1:14,6:21:3.01:147,3,0
chr10	17913027	.	ATT	A	2053.75	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=0.263;DP=330;FS=12.715;HRun=4;HaplotypeScore=56.8630;InbreedingCoeff=0.9368;MQ=61.54;MQ0=2;MQRankSum=0.419;QD=36.67;ReadPosRankSum=1.206;VQSLOD=2.1317;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:39.12:0,39,637	0/0:5,0:5:15.05:0,15,263	0/0:9,0:8:18.06:0,18,294	0/0:16,0:12:30.51:0,31,481	0/0:15,0:15:42.14:0,42,703	0/0:14,0:14:36.12:0,36,561	0/0:7,0:7:21.07:0,21,361	1/1:21,1:22:63.21:974,63,0	0/0:15,0:15:45.15:0,45,769	0/0:8,0:8:23.82:0,24,339	0/0:11,0:11:24.08:0,24,398	0/0:7,0:7:21.06:0,21,313	0/0:10,0:10:27.09:0,27,466	0/0:7,0:7:21.07:0,21,364	0/0:8,0:8:24.06:0,24,387	0/0:15,0:15:45.13:0,45,729	0/0:20,0:20:51.17:0,51,850	0/0:15,0:15:45.10:0,45,706	1/1:2,14:15:41.95:632,42,0	1/1:0,13:13:36:503,36,0	1/1:0,5:5:6.02:98,6,0	0/0:10,0:10:27.09:0,27,439	0/0:8,0:7:15.05:0,15,238	0/0:4,0:4:12.03:0,12,179	0/0:17,0:17:48.15:0,48,714	0/0:18,0:18:54.18:0,54,923	0/0:15,0:15:42.14:0,42,702	0/0:6,0:6:12.04:0,12,162
chr10	17913029	.	T	TTTA	2431.84	PASS	AB=1.000;AC=16;AF=0.286;AN=56;BaseQRankSum=3.114;DP=332;FS=19.397;HRun=0;HaplotypeScore=63.1388;InbreedingCoeff=0.3684;MQ=62.76;MQ0=1;MQRankSum=-1.927;QD=18.28;ReadPosRankSum=-0.302;VQSLOD=1.1984;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:36.11:0,36,614	0/0:5,0:5:14.99:0,15,194	0/0:11,0:12:9.23:0,9,331	0/0:14,0:12:29.93:0,30,502	0/0:16,0:16:14.59:0,15,676	0/1:11,0:11:41.62:42,0,301	0/0:9,0:9:24.07:0,24,407	1/1:1,23:26:75.23:1245,75,0	0/0:16,0:16:14.54:0,15,663	0/1:8,0:8:16.72:17,0,274	0/0:11,0:11:0.30:0,0,356	0/0:8,0:8:21.06:0,21,329	0/0:10,0:10:27.05:0,27,449	0/0:9,0:9:24.07:0,24,401	0/0:7,0:7:21.03:0,21,283	0/0:13,0:13:38.93:0,39,603	0/0:19,0:19:22.23:0,22,743	0/0:15,0:15:35.85:0,36,653	1/1:16,0:15:41.98:563,42,0	1/1:13,0:13:36:513,36,0	1/1:5,0:5:6.02:98,6,0	0/1:13,0:14:2.98:3,0,360	0/1:8,0:7:12.53:13,0,195	0/0:4,0:4:12.03:0,12,187	0/1:14,0:14:71.22:71,0,367	0/0:15,0:17:2.56:0,3,688	0/1:15,0:15:25.81:26,0,550	1/1:3,0:3:2.88:15,3,0
chr10	17914623	.	G	GTGTTTGTT	3092.74	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-1.201;DP=662;FS=5.833;HRun=0;HaplotypeScore=160.6729;InbreedingCoeff=0.9658;MQ=67.79;MQ0=4;MQRankSum=-8.171;QD=32.56;ReadPosRankSum=-2.701;VQSLOD=2.7688;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,99,2295	0/0:14,0:14:27.09:0,27,689	0/0:33,0:26:38.42:0,38,912	0/0:15,0:13:21.07:0,21,520	0/0:18,0:18:30.09:0,30,681	0/0:18,0:18:42.13:0,42,996	0/0:31,0:31:51.17:0,51,1195	1/1:20,0:20:9.03:207,9,0	0/0:28,0:28:60.15:0,60,1421	0/0:22,0:22:42.14:0,42,1018	0/0:6,0:8:15.05:0,15,342	0/0:34,0:34:66.18:0,66,1520	0/0:22,0:22:42.14:0,42,1069	0/0:24,0:24:44.67:0,45,1135	0/0:27,0:27:60.17:0,60,1366	0/0:14,0:14:33.11:0,33,839	0/0:37,0:37:69.24:0,69,1705	0/0:26,0:26:57.15:0,57,1316	1/1:18,13:30:42.10:1615,42,0	1/1:8,6:15:24.07:894,24,0	1/1:19,6:29:17.98:531,18,0	0/0:16,0:17:39.12:0,39,891	0/0:17,0:17:27.06:0,27,586	0/0:38,0:38:81.23:0,81,1965	0/0:16,0:16:33.11:0,33,781	0/0:28,0:28:57.18:0,57,1333	0/0:25,0:25:63.22:0,63,1488	0/0:7,0:7:12.04:0,12,307
chr10	17914869	.	TAAC	T	1861.02	PASS	AC=8;AF=0.148;AN=54;BaseQRankSum=1.786;DP=488;FS=1.096;HRun=0;HaplotypeScore=82.9208;InbreedingCoeff=0.8979;MQ=61.98;MQ0=2;MQRankSum=3.242;QD=26.59;ReadPosRankSum=-2.577;VQSLOD=3.1707;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:39:99:0,102,1657	0/0:10,0:10:29.97:0,30,426	0/0:11,0:6:2.86:0,3,56	./.	0/0:20,0:20:54.12:0,54,1002	0/0:19,0:19:48.10:0,48,814	0/0:22,0:22:51.09:0,51,818	1/1:5,24:29:69.08:801,69,0	0/0:10,0:10:30.05:0,30,508	0/0:27,0:27:72:0,72,1256	0/0:11,0:11:30.04:0,30,467	0/0:28,0:28:78.17:0,78,1373	0/0:9,0:9:12.02:0,12,210	0/0:13,0:13:36.09:0,36,669	0/0:17,0:17:33.09:0,33,610	0/0:14,0:14:36.10:0,36,672	0/0:30,0:30:75.21:0,75,1471	0/0:18,0:18:51.01:0,51,812	1/1:3,17:20:51.08:614,51,0	1/1:1,12:13:32.76:382,33,0	1/1:2,6:8:15.05:221,15,0	0/0:11,0:11:30.04:0,30,468	0/0:14,0:14:39.08:0,39,660	0/0:5,0:5:12.04:0,12,249	0/0:22,0:22:54.16:0,54,1039	0/0:15,0:15:4.79:0,5,638	0/0:24,0:24:69.15:0,69,1224	0/0:24,0:24:72.11:0,72,1235
chr10	17915114	.	T	TAC	4537.78	PASS	AB=0.978;AC=31;AF=0.554;AN=56;BaseQRankSum=-15.466;DP=607;FS=3.230;HRun=0;HaplotypeScore=93.8566;InbreedingCoeff=-0.5130;MQ=69.10;MQ0=4;MQRankSum=-1.337;QD=7.89;ReadPosRankSum=-0.994;VQSLOD=4.2622;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,37:46:33.21:917,33,0	0/1:7,0:7:31.67:32,0,41	0/0:21,0:13:6:0,6,55	0/1:19,0:17:18.58:19,0,51	0/1:22,0:22:96.75:97,0,100	0/1:26,0:26:44.45:44,0,130	0/1:35,0:36:99:161,0,111	1/1:26,0:26:36.02:408,36,0	0/1:19,0:19:50.38:150,0,50	0/1:26,0:25:63.92:111,0,64	0/1:13,0:13:28.61:29,0,44	1/1:6,20:26:12.26:585,12,0	0/1:22,0:22:77.28:77,0,123	0/1:18,0:18:40.19:40,0,107	0/1:13,0:13:42.53:43,0,69	0/1:8,0:8:3.40:95,0,3	0/1:36,0:35:99:166,0,138	0/1:26,0:26:86.03:86,0,128	1/1:6,12:18:42.04:511,42,0	1/1:2,12:14:9.03:144,9,0	0/1:6,20:25:10.79:443,0,11	0/1:6,0:6:10.95:11,0,42	0/1:15,0:15:22.46:22,0,67	0/1:46,1:47:99:137,0,198	0/1:20,0:19:72.76:73,0,104	0/1:22,0:22:68.11:68,0,94	0/1:17,0:16:61.27:68,0,61	0/0:11,0:11:30.87:0,31,146
chr10	17915115	.	A	ACA	4538.05	PASS	AB=1.000;AC=31;AF=0.554;AN=56;BaseQRankSum=-15.460;DP=613;FS=3.230;HRun=0;HaplotypeScore=96.0661;InbreedingCoeff=-0.5130;MQ=68.85;MQ0=5;MQRankSum=-1.452;QD=7.81;ReadPosRankSum=-1.387;VQSLOD=4.0633;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:45,0:45:33.21:917,33,0	0/1:7,0:7:31.67:32,0,41	0/0:21,0:13:6:0,6,55	0/1:20,0:17:18.58:19,0,51	0/1:21,0:21:96.75:97,0,100	0/1:26,0:26:44.45:44,0,130	0/1:36,0:36:99:161,0,111	1/1:20,4:26:36.02:408,36,0	0/1:19,0:19:50.38:150,0,50	0/1:25,0:24:63.92:111,0,64	0/1:13,0:13:28.61:29,0,44	1/1:26,0:26:12.26:585,12,0	0/1:22,0:22:77.28:77,0,123	0/1:21,0:21:40.46:40,0,107	0/1:13,0:13:42.53:43,0,69	0/1:8,0:8:3.40:95,0,3	0/1:36,0:35:99:166,0,138	0/1:26,0:26:86.03:86,0,128	1/1:19,0:19:42.04:511,42,0	1/1:14,0:14:9.03:144,9,0	0/1:29,0:27:10.79:443,0,11	0/1:6,0:6:10.95:11,0,42	0/1:15,0:15:22.46:22,0,67	0/1:47,0:47:99:137,0,198	0/1:21,0:20:72.76:73,0,104	0/1:23,0:23:68.11:68,0,94	0/1:17,0:16:61.27:68,0,61	0/0:11,0:11:30.87:0,31,146
chr10	17916114	.	T	TA	2797.35	PASS	AB=1.000;AC=14;AF=0.250;AN=56;BaseQRankSum=11.394;DP=374;FS=0.000;HRun=4;HaplotypeScore=43.1320;InbreedingCoeff=0.7826;MQ=74.76;MQ0=0;MQRankSum=2.403;QD=26.64;ReadPosRankSum=-1.323;VQSLOD=1.7472;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,21:21:60.15:782,60,0	0/0:3,0:3:9.03:0,9,102	0/1:9,0:8:24.54:25,0,122	0/1:12,0:12:10.66:11,0,185	0/0:19,0:19:48.09:0,48,511	0/0:23,0:23:63.13:0,63,677	0/0:5,0:5:15.04:0,15,170	1/1:4,20:24:63.17:798,63,0	0/0:9,0:9:27.08:0,27,305	0/0:23,0:23:66.16:0,66,718	0/0:18,0:18:54.06:0,54,568	1/1:0,9:9:27.09:361,27,0	0/0:10,0:10:30.07:0,30,330	0/0:16,0:16:45.11:0,45,495	0/0:10,0:10:30.07:0,30,325	0/0:11,0:11:33.09:0,33,373	0/0:18,0:18:45.11:0,45,499	0/0:17,0:17:48.06:0,48,494	1/1:1,8:9:24.06:294,24,0	1/1:0,16:16:47.91:556,48,0	1/1:0,5:5:12.04:161,12,0	0/0:4,0:3:8.98:0,9,88	0/0:6,0:6:15.03:0,15,161	0/0:6,0:6:15.04:0,15,170	0/0:15,0:15:45.13:0,45,508	0/0:25,0:25:66.19:0,66,746	0/0:19,0:19:57.16:0,57,645	0/0:12,0:12:36.10:0,36,406
chr10	17916349	.	A	AAC	331.93	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-0.032;DP=553;FS=0.000;HRun=0;HaplotypeScore=102.0819;InbreedingCoeff=0.7035;MQ=71.52;MQ0=14;MQRankSum=-0.043;QD=11.06;ReadPosRankSum=-0.593;VQSLOD=3.0326;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,11:14:3.01:49,3,0	0/0:8,0:8:18.06:0,18,235	0/0:39,0:23:45.14:0,45,558	0/0:49,0:24:35.40:0,35,383	0/0:23,0:23:48.15:0,48,600	0/0:29,0:29:60.19:0,60,773	0/0:15,0:15:36.09:0,36,439	0/0:27,0:27:54.81:0,55,709	0/0:11,0:11:9.03:0,9,113	0/0:22,0:21:48.15:0,48,597	0/0:16,0:16:24.03:0,24,282	1/1:5,11:16:24.08:390,24,0	0/0:13,0:13:30.10:0,30,375	0/0:23,0:23:60.16:0,60,751	0/0:29,0:29:75.12:0,75,929	0/0:18,0:18:15.04:0,15,187	0/0:15,0:15:36.12:0,36,468	0/0:14,0:14:33.58:0,34,424	0/0:10,0:10:18.06:0,18,224	0/0:20,0:20:21.04:0,21,237	0/0:13,0:12:3.01:0,3,34	0/0:9,0:9:9.03:0,9,113	0/0:6,0:6:6.02:0,6,75	0/0:23,0:23:18.06:0,18,225	0/0:13,0:13:27.09:0,27,360	0/0:27,0:26:57.11:0,57,669	0/0:25,0:25:66.05:0,66,828	0/0:26,0:26:12.03:0,12,150
chr10	17916366	.	GCACA	G	3994.28	PASS	AB=0.861;AC=29;AF=0.659;AN=44;BaseQRankSum=-2.969;DP=506;FS=7.913;HRun=0;HaplotypeScore=97.4734;InbreedingCoeff=0.2559;MQ=50.81;MQ0=32;MQRankSum=3.691;QD=13.18;ReadPosRankSum=2.157;VQSLOD=2.2527;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:10:3.01:0,3,34	1/1:8,0:7:9.03:136,9,0	0/0:40,0:16:8.68:0,9,85	0/0:46,0:12:3:0,3,28	0/1:18,0:17:20.09:169,0,20	1/1:27,0:26:20.85:310,21,0	1/1:14,0:11:3.01:46,3,0	0/1:16,0:22:0:0,0,0	1/1:5,0:6:3.01:30,3,0	1/1:10,11:21:27.09:393,27,0	1/1:16,0:16:3.01:37,3,0	0/0:12,0:13:1.82:0,2,5	./.	1/1:21,0:21:27.07:356,27,0	1/1:29,0:30:49.15:612,49,0	./.	0/1:15,0:12:37.06:324,0,37	0/1:16,0:17:22.11:146,0,22	1/1:4,0:6:3:28,3,0	0/0:17,0:17:0.47:0,0,1	./.	./.	./.	./.	1/1:15,0:15:21.07:303,21,0	1/1:21,0:21:42.03:556,42,0	1/1:22,0:23:39.10:517,39,0	0/1:6,0:19:7.52:31,0,8
chr10	17916377	.	CACACACACACACACACACACAGAGAGAGAGAG	C	1031.07	PASS	AB=1.000;AC=7;AF=0.130;AN=54;BaseQRankSum=1.590;DP=469;FS=6.826;HRun=0;HaplotypeScore=256.2485;InbreedingCoeff=0.5311;MQ=46.73;MQ0=36;MQRankSum=-3.250;QD=22.91;ReadPosRankSum=-2.864;VQSLOD=0.9866;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:7:3.01:0,3,210	0/0:8,0:7:16.61:0,17,748	0/0:28,0:6:18.05:0,18,678	0/0:38,0:6:15.05:0,15,765	0/0:17,0:16:36.12:0,36,2228	0/0:24,0:23:45.05:0,45,2428	0/0:15,0:12:11.56:0,12,549	1/1:19,0:17:30.08:453,30,0	0/0:8,0:8:0.67:0,1,307	0/0:24,0:22:61.73:0,62,2161	0/0:18,0:18:9.03:0,9,331	0/1:9,0:9:13.89:14,0,167	0/0:7,0:6:9.03:0,9,429	0/0:20,0:20:42.11:0,42,1836	0/0:28,0:28:72.23:0,72,3879	0/0:17,0:15:4.25:0,4,73	0/0:20,0:17:46.68:0,47,2255	0/0:14,0:14:29.13:0,29,1683	1/1:5,0:4:12.04:406,12,0	1/1:5,7:12:6.02:292,6,0	./.	0/0:10,0:10:2.30:0,2,71	0/0:8,0:7:2.99:0,3,24	0/0:16,0:16:8.06:0,8,333	0/0:15,0:15:24.08:0,24,1721	0/0:24,0:23:69.24:0,69,3538	0/0:22,0:22:57.20:0,57,2889	0/0:17,0:17:15.05:0,15,763
chr10	17916391	.	CACACACAGAG	C	2717.36	PASS	AB=0.995;AC=29;AF=0.558;AN=52;BaseQRankSum=0.186;DP=429;FS=5.612;HRun=0;HaplotypeScore=119.4500;InbreedingCoeff=-0.0443;MQ=46.14;MQ0=30;MQRankSum=3.507;QD=8.68;ReadPosRankSum=4.147;VQSLOD=1.8032;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:8:3.01:0,3,52	0/1:6,0:5:9.05:104,0,9	0/0:17,0:3:8.51:0,9,120	0/0:22,0:3:5.99:0,6,79	0/1:15,1:14:39.85:161,0,40	0/1:23,0:22:91.91:164,0,92	0/1:14,0:10:35.32:36,0,35	0/0:18,0:16:7.75:0,8,44	0/1:9,0:9:37.49:37,0,57	0/1:21,0:19:28.19:213,0,28	1/1:17,0:17:2.99:23,3,0	0/0:5,0:5:3.01:0,3,46	1/1:9,0:8:2.84:14,3,0	1/1:15,0:15:22.87:196,23,0	0/1:26,0:26:99:216,0,292	0/0:18,0:16:6.82:0,7,103	0/1:23,0:20:1.27:317,0,1	0/1:17,0:17:92.04:92,0,299	1/1:9,0:8:6.90:71,7,0	1/1:8,0:8:6.01:61,6,0	./.	1/1:3,7:10:0.47:1,0,0	./.	1/1:18,0:18:3.48:34,3,0	0/1:14,0:14:58.46:107,0,58	1/1:20,0:19:44.15:513,44,0	1/1:19,0:20:18.52:461,19,0	0/1:16,0:17:27.51:49,0,28
chr10	17916393	.	CACACAGAG	C	4445.73	PASS	AB=1.000;AC=34;AF=0.654;AN=52;BaseQRankSum=-3.746;DP=418;FS=31.079;HRun=0;HaplotypeScore=104.1579;InbreedingCoeff=0.1290;MQ=45.87;MQ0=29;MQRankSum=3.367;QD=13.76;ReadPosRankSum=4.103;VQSLOD=1.7167;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:8:3.01:0,3,34	1/1:5,0:4:8.28:135,8,0	0/0:16,0:3:8.68:0,9,85	0/0:19,0:3:3:0,3,28	1/1:14,0:12:22.13:276,22,0	0/1:20,0:19:85.38:283,0,85	0/1:12,0:8:38.12:40,0,38	1/1:19,0:17:0.23:1,0,0	0/1:9,0:9:21.29:21,0,37	1/1:21,0:19:8.56:370,9,0	1/1:3,14:17:3.01:37,3,0	0/0:5,0:5:3.01:0,3,46	1/1:4,4:7:3.01:35,3,0	1/1:15,0:15:26.96:356,27,0	0/1:25,0:25:99:496,0,211	0/0:18,0:16:6.91:0,7,103	1/1:23,0:20:18.41:551,18,0	0/1:17,0:17:99:114,0,253	1/1:9,0:9:6.48:58,6,0	1/1:9,0:8:6.01:62,6,0	./.	0/1:10,0:10:0:0,0,0	./.	1/1:4,0:18:3.48:34,3,0	0/1:14,0:14:12.40:219,0,12	1/1:5,14:18:44.75:675,45,0	1/1:21,0:21:47.83:650,48,0	0/1:18,0:17:30.74:31,0,46
chr10	17916444	.	A	AGAGAGAGT	180.70	PASS	AB=0.548;AC=3;AF=0.054;AN=56;BaseQRankSum=2.406;DP=425;FS=2.335;HRun=0;HaplotypeScore=123.0538;InbreedingCoeff=0.6099;MQ=64.87;MQ0=15;MQRankSum=0.137;QD=5.48;ReadPosRankSum=-1.683;VQSLOD=2.0210;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:16:21.37:181,21,0	0/0:2,0:2:6:0,6,51	0/0:29,0:20:47.30:0,47,577	0/0:20,0:9:10.93:0,11,138	0/0:14,0:14:32.98:0,33,463	0/0:15,0:14:20.65:0,21,292	0/0:14,0:14:23.47:0,23,243	0/0:27,0:26:74.63:0,75,669	0/0:12,0:12:26.86:0,27,410	0/0:16,0:15:39.05:0,39,394	0/0:18,0:17:32.92:0,33,268	0/1:3,11:17:6.86:104,0,7	0/0:9,0:9:17.96:0,18,195	0/0:9,0:9:20.96:0,21,174	0/0:20,0:20:46.85:0,47,555	0/0:15,0:14:36.89:0,37,354	0/0:16,0:15:39:0,39,607	0/0:14,0:14:35.98:0,36,462	0/0:15,0:15:45:0,45,443	0/0:14,0:14:26.93:0,27,270	0/0:10,0:8:8.99:0,9,75	0/0:15,0:15:26.94:0,27,220	0/0:11,0:11:26.99:0,27,271	0/0:11,0:11:11.99:0,12,146	0/0:13,0:13:30:0,30,268	0/0:17,0:17:42.67:0,43,427	0/0:11,0:11:24.02:0,24,373	0/0:25,0:23:62.73:0,63,510
chr10	17916728	.	T	TTC	1970.43	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-6.457;DP=750;FS=26.626;HRun=0;HaplotypeScore=89.0355;InbreedingCoeff=0.9976;MQ=83.97;MQ0=0;MQRankSum=-0.464;QD=53.25;ReadPosRankSum=1.300;VQSLOD=2.3600;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,129,1974	0/0:9,0:9:24.08:0,24,367	0/0:29,0:29:78.18:0,78,1107	0/0:24,0:24:50.54:0,51,832	0/0:20,0:20:57.19:0,57,869	0/0:27,0:27:78.25:0,78,1162	0/0:29,0:29:75.25:0,75,1148	0/0:37,0:37:99:0,102,1433	1/1:2,35:37:99:2065,108,0	0/0:25,0:25:75.24:0,75,1090	0/0:16,0:16:48.09:0,48,675	0/0:26,0:26:78.25:0,78,1173	0/0:24,0:24:72.23:0,72,1074	0/0:30,0:30:87.30:0,87,1332	0/0:34,0:34:99:0,102,1496	0/0:26,0:25:78.24:0,78,1154	0/0:38,0:38:99:0,108,1623	0/0:11,0:11:33.11:0,33,505	0/0:24,0:24:66.19:0,66,978	0/0:16,0:16:48.12:0,48,698	0/0:36,0:36:99:0,102,1513	0/0:19,0:19:51.16:0,51,753	0/0:15,0:15:42.11:0,42,598	0/0:53,0:53:99:0,154,2341	0/0:17,0:17:39.13:0,39,593	0/0:24,0:24:63.20:0,63,928	0/0:37,0:37:99:0,111,1697	0/0:21,0:21:60.12:0,60,886
chr10	17918473	.	C	CT	1776.62	PASS	AB=0.958;AC=10;AF=0.179;AN=56;BaseQRankSum=-8.787;DP=562;FS=3.490;HRun=10;HaplotypeScore=57.4383;InbreedingCoeff=0.7088;MQ=73.53;MQ0=0;MQRankSum=-0.064;QD=16.76;ReadPosRankSum=-3.447;VQSLOD=3.0966;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:39:97.96:0,98,806	0/0:7,0:7:17.98:0,18,148	0/0:15,0:15:14.80:0,15,134	0/1:8,0:8:18.94:19,0,55	0/0:32,0:32:89.86:0,90,735	0/0:23,0:25:66.95:0,67,523	0/0:14,0:14:35.91:0,36,290	1/1:9,20:29:57.09:586,57,0	0/0:11,0:11:29.94:0,30,243	0/0:23,0:23:53.90:0,54,441	0/0:27,0:29:73.88:0,74,590	0/0:19,0:19:47.94:0,48,394	0/0:15,0:15:17.35:0,17,274	0/0:21,0:22:58.94:0,59,469	0/0:21,0:21:59.93:0,60,493	0/0:13,0:14:37.99:0,38,301	0/0:39,0:39:99:0,116,923	0/0:16,0:17:40.95:0,41,322	1/1:4,15:20:4.62:427,5,0	1/1:2,20:22:38.36:566,38,0	1/1:2,14:16:11.45:327,11,0	0/0:16,0:16:47.84:0,48,376	0/1:10,1:11:8.01:8,0,148	0/0:18,0:18:47.84:0,48,386	0/0:18,0:18:44.90:0,45,365	0/0:22,0:22:50.90:0,51,414	0/0:20,1:22:33.92:0,34,421	0/0:17,0:17:10.05:0,10,273
chr10	17919671	.	C	CT	3542.59	PASS	AB=0.687;AC=40;AF=0.714;AN=56;BaseQRankSum=-2.248;DP=435;FS=1.895;HRun=12;HaplotypeScore=50.3800;InbreedingCoeff=0.3114;MQ=58.84;MQ0=8;MQRankSum=-1.169;QD=9.65;ReadPosRankSum=-1.272;VQSLOD=2.1891;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,1:29:23.01:0,23,417	1/1:3,4:7:12.02:117,12,0	0/0:9,0:5:2.95:0,3,20	0/1:10,0:8:0.80:1,0,17	0/1:7,4:11:3.85:104,0,4	1/1:3,8:10:15.02:146,15,0	1/1:6,8:13:11.97:107,12,0	1/1:19,0:30:39.04:226,39,0	0/0:14,0:14:32.74:0,33,235	1/1:7,9:16:26.87:243,27,0	1/1:7,6:13:8.85:73,9,0	0/0:15,0:16:24.06:0,24,160	0/1:5,9:15:4.77:142,0,5	0/1:3,9:13:7.05:87,0,7	0/1:5,16:21:20.29:305,0,20	1/1:4,8:12:14.96:134,15,0	1/1:11,21:32:48.83:437,49,0	1/1:9,10:19:2.36:180,2,0	0/1:12,0:19:1.40:96,0,1	1/1:6,2:13:25.85:160,26,0	1/1:4,0:3:5.45:28,5,0	1/1:4,5:9:12.49:117,12,0	1/1:2,13:15:24.51:234,25,0	1/1:3,12:14:21.03:204,21,0	1/1:5,8:13:18.03:175,18,0	0/1:7,10:18:35.86:148,0,36	0/1:9,10:18:20.28:20,0,34	1/1:5,5:10:6.01:58,6,0
chr10	17920037	.	G	GA	2328.32	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-10.443;DP=399;FS=24.379;HRun=7;HaplotypeScore=45.2137;InbreedingCoeff=0.9702;MQ=75.26;MQ0=0;MQRankSum=-1.098;QD=29.47;ReadPosRankSum=-2.870;VQSLOD=1.2378;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:33.05:0,33,319	0/0:9,0:9:21.03:0,21,203	0/0:14,0:14:11.26:0,11,227	0/0:4,0:4:10.83:0,11,92	0/0:27,0:27:81.12:0,81,777	0/0:19,0:19:51.08:0,51,492	0/0:7,0:7:21.02:0,21,197	1/1:7,34:41:99:1286,108,0	0/0:12,0:12:30.05:0,30,290	0/0:19,0:19:54.08:0,54,517	0/0:7,0:7:18.03:0,18,174	0/0:13,0:13:36.06:0,36,348	0/0:14,0:14:36.03:0,36,341	0/0:15,0:15:36.04:0,36,342	0/0:11,0:11:33.02:0,33,310	0/0:8,0:8:24.04:0,24,232	0/0:18,0:18:36.05:0,36,348	0/0:25,0:25:63.06:0,63,591	1/1:2,13:15:39.08:444,39,0	1/1:3,12:15:39.12:468,39,0	1/1:0,8:8:24.07:290,24,0	0/0:8,0:8:24.04:0,24,232	0/0:13,0:13:33.04:0,33,313	0/0:13,0:13:39.05:0,39,370	0/0:17,0:17:45.07:0,45,435	0/0:14,0:14:39.06:0,39,377	0/0:13,0:13:36.05:0,36,347	0/0:7,0:7:18.03:0,18,174
chr10	17921180	.	G	GTA	213.76	PASS	AB=0.811;AC=5;AF=0.50;AN=10;BaseQRankSum=-3.134;DP=200;FS=6.455;HRun=0;HaplotypeScore=51.7258;MQ=56.18;MQ0=4;MQRankSum=1.248;QD=3.69;ReadPosRankSum=-0.971;VQSLOD=0.7483;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	1/1:8,0:8:5.74:38,6,0	0/1:7,6:13:20.78:122,0,21	0/1:13,0:13:10.67:11,0,19	0/0:26,0:26:25.57:0,26,125	./.	./.	./.	./.	./.	./.	./.	0/1:16,2:23:19.45:122,0,19
chr10	17921194	.	AT	A	130.68	PASS	AB=0.592;AC=4;AF=0.133;AN=30;BaseQRankSum=4.549;DP=101;FS=2.582;HRun=1;HaplotypeScore=50.6789;InbreedingCoeff=0.1072;MQ=51.92;MQ0=5;MQRankSum=-2.472;QD=5.23;ReadPosRankSum=1.331;VQSLOD=0.6068;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:3:7.57:0,8,73	./.	0/0:3,0:1:2.84:0,3,14	0/0:12,0:3:2.96:0,3,19	./.	0/0:2,0:2:3.01:0,3,38	./.	1/1:2,4:4:12:111,12,0	./.	0/0:4,0:4:12.04:0,12,152	./.	./.	./.	0/0:2,0:2:3:0,3,25	0/0:3,0:3:9.01:0,9,100	0/0:2,0:2:6.02:0,6,76	0/0:7,0:7:3.48:0,3,45	0/0:14,0:14:27.07:0,27,344	0/1:2,2:4:20.10:20,0,53	0/1:1,13:15:95.61:96,0,110	./.	./.	./.	./.	0/0:1,0:1:3.01:0,3,38	./.	./.	0/0:21,0:20:40.99:0,41,472
chr10	17921196	.	ATATATATATATATATATATATAT	A	2688.43	PASS	AC=8;AF=0.286;AN=28;BaseQRankSum=5.418;DP=91;FS=5.616;HRun=0;HaplotypeScore=81.6058;InbreedingCoeff=0.5321;MQ=50.78;MQ0=5;MQRankSum=-5.054;QD=107.54;ReadPosRankSum=2.093;VQSLOD=2.4611;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:3,0:2:2.80:0,3,7	./.	1/1:3,0:1:2.04:6,2,0	0/0:12,0:3:2.99:0,3,24	./.	0/0:2,0:2:3.01:0,3,143	./.	1/1:3,0:1:2.98:22,3,0	./.	0/0:3,0:3:9.03:0,9,310	./.	./.	./.	./.	0/0:2,0:2:6.01:0,6,144	0/0:1,0:1:2.99:0,3,24	0/0:7,0:7:4.83:0,5,312	0/0:13,0:13:27.09:0,27,2391	1/1:2,2:4:12.04:575,12,0	1/1:2,13:15:45.15:2194,45,0	./.	./.	./.	./.	0/0:1,0:1:3.01:0,3,177	./.	./.	0/0:20,0:19:42.13:0,42,3112
chr10	17923871	.	T	TTA	3474.34	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-10.912;DP=558;FS=0.986;HRun=0;HaplotypeScore=60.4054;InbreedingCoeff=0.9982;MQ=75.90;MQ0=1;MQRankSum=-0.365;QD=35.82;ReadPosRankSum=-3.767;VQSLOD=4.4359;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:57.17:0,57,712	0/0:11,0:11:33.11:0,33,420	0/0:17,0:17:36.11:0,36,455	0/0:12,0:12:27.08:0,27,331	0/0:43,0:43:99:0,123,1549	0/0:20,0:20:57.14:0,57,707	0/0:16,0:16:42.13:0,42,534	1/1:14,26:40:75.21:1165,75,0	0/0:18,0:18:45.14:0,45,571	0/0:27,0:27:69.22:0,69,878	0/0:22,0:22:51.15:0,51,634	0/0:14,0:14:39.12:0,39,495	0/0:25,0:25:66.18:0,66,802	0/0:20,0:20:51.16:0,51,649	0/0:20,0:20:57.17:0,57,712	0/0:9,0:9:21.07:0,21,267	0/0:16,0:16:39.12:0,39,497	0/0:16,0:16:36.11:0,36,456	1/1:3,12:15:36.12:603,36,0	1/1:1,24:25:66.23:1104,66,0	1/1:3,14:16:36.12:602,36,0	0/0:17,0:17:39.12:0,39,496	0/0:25,0:25:69.22:0,69,878	0/0:14,0:14:39.12:0,39,496	0/0:18,0:18:45.13:0,45,561	0/0:24,0:24:66.21:0,66,840	0/0:23,0:23:51.16:0,51,649	0/0:13,0:13:33.11:0,33,419
chr10	17924946	.	GGA	G	5001.01	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=6.853;DP=814;FS=11.047;HRun=0;HaplotypeScore=155.8870;InbreedingCoeff=0.9997;MQ=85.08;MQ0=3;MQRankSum=1.951;QD=32.90;ReadPosRankSum=-2.615;VQSLOD=5.6645;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,117,1975	0/0:15,0:15:42.13:0,42,697	0/0:42,0:39:63.03:0,63,1227	0/0:53,0:48:78.09:0,78,1336	0/0:29,0:29:66:0,66,1077	0/0:27,0:27:63.17:0,63,1191	0/0:27,0:27:69.69:0,70,1164	1/1:2,33:35:99:1288,99,0	0/0:42,0:42:99:0,117,1901	0/0:31,0:31:84.28:0,84,1431	0/0:14,0:14:33.05:0,33,567	0/0:31,0:31:84.28:0,84,1425	0/0:28,0:28:60.19:0,60,980	0/0:16,0:16:42.13:0,42,697	0/0:24,0:24:59.38:0,59,959	0/0:32,0:32:72.25:0,72,1244	0/0:31,0:31:84.29:0,84,1451	0/0:20,0:20:57.19:0,57,971	1/1:2,15:16:39.13:518,39,0	1/1:6,33:39:87.29:1158,87,0	1/1:6,55:61:99:2037,154,0	0/0:17,0:17:35.91:0,36,623	0/0:22,0:22:34.96:0,35,622	0/0:27,0:27:63.06:0,63,1070	0/0:20,0:20:36.83:0,37,767	0/0:28,0:28:71.73:0,72,1204	0/0:26,0:24:69.24:0,69,1192	0/0:12,0:12:36.11:0,36,596
chr10	17925011	.	GA	G	5101.79	PASS	AB=0.533;AC=36;AF=0.643;AN=56;BaseQRankSum=14.479;DP=584;FS=21.841;HRun=1;HaplotypeScore=101.3974;InbreedingCoeff=0.8156;MQ=49.38;MQ0=42;MQRankSum=-9.826;QD=30.55;ReadPosRankSum=-2.633;VQSLOD=2.7426;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:61,0:58:99:0,168,2681	1/1:0,7:7:21.07:291,21,0	0/0:43,0:8:24.07:0,24,359	0/0:50,0:12:30.09:0,30,522	1/1:0,10:10:11.78:161,12,0	1/1:0,8:8:24.03:311,24,0	1/1:0,6:6:7.98:117,8,0	0/0:43,0:32:96.32:0,96,1512	0/0:51,0:51:99:0,154,2440	1/1:0,11:10:30.10:419,30,0	1/1:2,8:9:17.56:248,18,0	0/0:25,0:25:72.25:0,72,1148	1/1:1,7:8:24.08:332,24,0	1/1:0,7:7:18.06:243,18,0	1/1:0,14:14:36.05:478,36,0	0/1:2,14:16:4:506,0,4	1/1:0,9:9:24.08:331,24,0	0/1:1,7:8:6.14:230,0,6	0/0:28,0:21:63.20:0,63,986	0/0:36,0:36:99:0,108,1716	0/0:80,0:80:99:0,222,3439	1/1:0,11:11:27.06:356,27,0	1/1:0,6:6:7.25:122,7,0	1/1:5,12:17:18.44:314,18,0	1/1:1,4:5:15.03:181,15,0	1/1:0,4:4:12.04:168,12,0	1/1:0,9:9:18.06:252,18,0	1/1:0,1:1:3.01:42,3,0
chr10	17925019	.	A	AG	3642.65	PASS	AB=0.595;AC=36;AF=0.643;AN=56;BaseQRankSum=14.518;DP=542;FS=20.894;HRun=2;HaplotypeScore=93.9062;InbreedingCoeff=0.7610;MQ=50.59;MQ0=33;MQRankSum=-12.509;QD=30.87;ReadPosRankSum=-2.215;VQSLOD=1.5836;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:64,0:63:99:0,168,2308	1/1:0,6:6:18.06:214,18,0	0/0:43,0:13:36.05:0,36,445	0/0:52,0:16:39.79:0,40,559	1/1:0,5:5:5.70:61,6,0	1/1:0,6:6:18.04:231,18,0	1/1:0,4:4:9.07:81,9,0	0/0:47,0:41:99:0,120,1641	0/0:49,0:49:99:0,147,2049	1/1:1,5:6:15.03:220,15,0	1/1:1,5:5:15.04:168,15,0	0/0:24,0:24:72.22:0,72,989	1/1:0,7:7:21.07:284,21,0	1/1:0,5:5:15.04:168,15,0	1/1:0,12:12:36.09:421,36,0	0/1:3,9:12:47.43:310,0,47	1/1:1,6:7:15.05:223,15,0	1/1:1,6:7:18.06:287,18,0	0/0:29,0:23:69.21:0,69,933	0/0:33,0:33:99:0,99,1365	0/0:82,0:82:99:0,232,3195	1/1:1,6:7:17.83:185,18,0	1/1:0,3:3:9.03:104,9,0	0/1:5,8:13:9.36:188,0,9	1/1:0,4:4:12.04:141,12,0	1/1:0,2:2:6.02:86,6,0	1/1:0,5:4:15.05:224,15,0	1/1:0,1:1:3.01:47,3,0
chr10	17925115	.	CTGGA	C	2758.99	PASS	AB=0.976;AC=31;AF=0.646;AN=48;BaseQRankSum=11.891;DP=434;FS=10.130;HRun=0;HaplotypeScore=120.7517;InbreedingCoeff=0.7737;MQ=84.48;MQ0=0;MQRankSum=-10.329;QD=21.72;ReadPosRankSum=0.325;VQSLOD=3.0752;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:61,0:61:99:0,148,3694	1/1:0,2:2:3.01:56,3,0	0/0:26,0:23:34.74:0,35,1009	0/1:39,0:36:15.09:15,0,1544	./.	1/1:0,3:3:9.03:167,9,0	1/1:0,3:3:6.02:111,6,0	0/0:32,0:32:72.24:0,72,1660	0/0:34,0:34:99:0,102,2670	1/1:0,4:5:15.05:279,15,0	./.	0/0:20,0:20:60.21:0,60,1467	1/1:0,5:5:15.05:279,15,0	1/1:0,12:12:9.03:167,9,0	1/1:0,7:7:6.02:111,6,0	1/1:0,5:5:12.04:223,12,0	1/1:0,8:8:15.05:279,15,0	1/1:1,4:5:11.83:181,12,0	0/0:27,0:27:16.55:0,17,1613	0/0:19,0:19:33.09:0,33,763	0/0:66,1:67:99:0,116,3785	./.	./.	1/1:0,10:10:8.93:129,9,0	1/1:0,5:5:6.02:112,6,0	1/1:0,4:4:12.04:223,12,0	1/1:0,7:7:15.05:279,15,0	1/1:1,5:6:18.06:335,18,0
chr10	17926881	.	A	AGAAG	5815.64	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-7.496;DP=681;FS=2.026;HRun=0;HaplotypeScore=135.4409;InbreedingCoeff=0.9521;MQ=76.42;MQ0=0;MQRankSum=-2.666;QD=57.02;ReadPosRankSum=-1.932;VQSLOD=5.5419;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,147,2623	0/0:9,0:9:27.09:0,27,481	0/0:20,0:20:51.16:0,51,881	0/0:20,0:20:56.97:0,57,956	0/0:20,0:20:42.14:0,42,721	0/0:21,0:21:57.15:0,57,1008	0/0:25,0:25:60.21:0,60,1085	1/1:14,21:35:81.28:2091,81,0	0/0:30,0:30:81.23:0,81,1445	0/0:30,0:30:78.25:0,78,1347	0/0:11,0:11:33.11:0,33,590	0/0:31,0:31:84.27:0,84,1490	0/0:25,0:25:69.24:0,69,1265	0/0:26,0:26:78.25:0,78,1377	0/0:38,0:38:99:0,111,1994	0/0:32,0:32:90.27:0,90,1605	0/0:31,0:31:78.22:0,78,1386	0/0:18,0:18:48.16:0,48,883	1/1:4,9:14:27.06:654,27,0	1/1:2,10:12:27.09:670,27,0	1/1:5,35:41:99:2401,99,0	0/0:23,0:23:57.19:0,57,1011	0/0:15,0:15:42.12:0,42,703	0/0:34,0:34:84.25:0,84,1522	0/0:23,0:23:66.23:0,66,1214	0/0:19,0:19:54.19:0,54,994	0/0:25,0:25:66.23:0,66,1206	0/0:1,0:1:3.01:0,3,55
chr10	17927761	.	ACCTT	A	5362.73	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=12.090;DP=678;FS=0.396;HRun=0;HaplotypeScore=111.5480;InbreedingCoeff=0.9999;MQ=78.38;MQ0=0;MQRankSum=-5.425;QD=43.96;ReadPosRankSum=-4.074;VQSLOD=4.3534;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,105,2689	0/0:11,0:11:33.11:0,33,861	0/0:16,0:16:45.15:0,45,1054	0/0:22,0:22:54.19:0,54,1326	0/0:30,0:30:78.27:0,78,2097	0/0:18,0:18:51.18:0,51,1377	0/0:20,0:20:57.20:0,57,1497	1/1:6,28:34:84.29:1561,84,0	1/1:0,15:15:39.13:740,39,0	0/0:29,0:29:84.25:0,84,2141	0/0:15,0:15:45.15:0,45,1102	0/0:35,0:35:99:0,105,2738	0/0:29,0:29:84.29:0,84,2167	0/0:25,0:25:69.24:0,69,1832	0/0:35,0:35:99:0,102,2575	0/0:31,0:31:87.30:0,87,2342	0/0:29,0:29:87.30:0,87,2249	0/0:20,0:20:54.14:0,54,1389	1/1:2,20:21:57.20:1057,57,0	1/1:3,21:24:51.17:906,51,0	1/1:2,25:27:62.66:1099,63,0	0/0:18,0:18:51.16:0,51,1274	0/0:12,0:12:36.11:0,36,876	0/0:26,0:26:78.27:0,78,2106	0/0:28,0:28:78.27:0,78,2045	0/0:27,0:27:78.27:0,78,2005	0/0:28,0:28:81.28:0,81,2127	0/0:16,0:16:48.16:0,48,1279
chr10	17928273	.	AG	A	543.17	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=9.256;DP=820;FS=16.355;HRun=2;HaplotypeScore=89.0651;InbreedingCoeff=0.9453;MQ=93.05;MQ0=0;MQRankSum=-1.892;QD=15.98;ReadPosRankSum=0.973;VQSLOD=2.4490;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,111,1634	0/0:14,0:14:42.14:0,42,624	0/0:39,0:39:87.90:0,88,1461	0/0:32,0:32:87.22:0,87,1221	0/0:18,0:18:54.18:0,54,808	0/0:24,0:24:72.23:0,72,1060	0/0:31,0:31:93.32:0,93,1393	0/0:34,0:34:96.32:0,96,1434	1/1:3,31:34:68.92:638,69,0	0/0:37,0:37:99:0,108,1590	0/0:26,0:26:69.23:0,69,1021	0/0:28,0:28:72.05:0,72,1064	0/0:35,0:35:99:0,105,1572	0/0:34,0:34:99:0,99,1429	0/0:35,0:35:99:0,105,1552	0/0:33,0:33:99:0,99,1484	0/0:20,0:20:60.20:0,60,898	0/0:24,0:24:72.21:0,72,1054	0/0:21,0:21:63.21:0,63,932	0/0:26,0:26:78.24:0,78,1124	0/0:39,0:39:99:0,114,1665	0/0:35,0:35:99:0,102,1490	0/0:22,0:22:63.21:0,63,944	0/0:41,0:41:99:0,123,1823	0/0:33,0:33:99:0,99,1441	0/0:27,0:27:78.25:0,78,1128	0/0:36,0:36:99:0,108,1575	0/0:4,0:4:9.03:0,9,132
chr10	17928277	.	GAA	G	788.95	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=9.236;DP=811;FS=14.128;HRun=2;HaplotypeScore=102.8246;InbreedingCoeff=0.9845;MQ=90.07;MQ0=0;MQRankSum=-1.769;QD=22.54;ReadPosRankSum=0.314;VQSLOD=0.7652;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,111,2208	0/0:15,0:15:45.14:0,45,846	0/0:34,0:34:96.27:0,96,1770	0/0:29,0:29:78.21:0,78,1473	0/0:20,0:20:60.21:0,60,1186	0/0:25,0:25:75.26:0,75,1511	0/0:33,0:33:99:0,99,1938	0/0:29,0:29:87.26:0,87,1663	1/1:8,27:35:64.13:884,64,0	0/0:35,0:35:99:0,105,2044	0/0:25,0:25:72.20:0,72,1419	0/0:29,0:29:72.24:0,72,1430	0/0:35,0:35:99:0,105,2049	0/0:34,0:34:99:0,102,1995	0/0:37,0:37:99:0,111,2204	0/0:32,0:32:96.32:0,96,1895	0/0:21,0:21:63.17:0,63,1238	0/0:23,0:23:69.16:0,69,1319	0/0:20,0:20:60.19:0,60,1177	0/0:25,0:25:74.97:0,75,1393	0/0:39,0:39:99:0,117,2314	0/0:35,0:35:99:0,105,2073	0/0:22,0:22:66.21:0,66,1293	0/0:42,0:42:99:0,126,2505	0/0:33,0:33:99:0,99,1938	0/0:23,0:23:69.23:0,69,1369	0/0:36,0:36:99:0,108,2116	0/0:5,0:5:15.05:0,15,283
chr10	17928362	.	GTACAACACACACAGA	G	1800.56	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.478;DP=899;FS=0.000;HRun=0;HaplotypeScore=350.6810;InbreedingCoeff=0.9996;MQ=72.05;MQ0=2;MQRankSum=-8.180;QD=26.87;ReadPosRankSum=-4.006;VQSLOD=0.8537;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:5,40:45:48.16:995,48,0	0/0:13,0:13:36.08:0,36,1841	0/0:54,0:48:99:0,110,4829	0/0:66,0:59:99:0,109,3854	0/0:32,0:32:90.27:0,90,5759	0/0:32,0:31:90.28:0,90,5364	0/0:22,0:22:63.18:0,63,3310	0/0:35,0:35:93.24:0,93,3922	0/0:39,0:39:99:0,114,7145	0/0:35,0:35:99:0,102,5974	0/0:27,0:27:78.19:0,78,4573	1/1:2,20:22:29.89:927,30,0	0/0:29,0:29:78.23:0,78,4812	0/0:33,0:33:96.30:0,96,5904	0/0:35,0:35:99:0,99,5470	0/0:27,0:27:72.20:0,72,4361	0/0:22,0:22:60.05:0,60,3530	0/0:28,0:28:72.18:0,72,3492	0/0:22,0:22:51.11:0,51,2702	0/0:24,0:24:66.20:0,66,3897	0/0:56,0:56:99:0,162,9276	0/0:23,0:23:60.15:0,60,3048	0/0:23,0:23:66.12:0,66,4010	0/0:41,0:41:99:0,111,6805	0/0:17,0:16:45.14:0,45,2601	0/0:36,0:36:99:0,102,6245	0/0:40,0:40:99:0,117,7252	0/0:18,0:18:54.19:0,54,3705
chr10	17928507	.	G	GTT	1673.60	PASS	AB=0.770;AC=10;AF=0.179;AN=56;BaseQRankSum=10.969;DP=713;FS=1.719;HRun=9;HaplotypeScore=97.7918;InbreedingCoeff=0.7722;MQ=82.52;MQ0=0;MQRankSum=-1.447;QD=11.39;ReadPosRankSum=-3.821;VQSLOD=0.7515;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:78.64:0,79,1030	0/1:10,0:10:0.67:1,0,171	0/0:23,0:23:42.03:0,42,427	0/0:26,0:26:42.06:0,42,440	0/0:31,0:31:78.10:0,78,812	0/0:28,0:28:65.80:0,66,737	0/0:26,0:26:63.09:0,63,646	1/1:8,0:37:69.35:293,69,0	1/1:0,26:26:72.24:1108,72,0	0/0:46,0:46:99:0,117,1240	0/0:21,0:21:54.09:0,54,565	0/0:25,0:25:60.08:0,60,630	0/0:22,0:22:54.12:0,54,575	0/0:22,0:22:54.11:0,54,567	0/0:25,0:25:66.16:0,66,702	0/0:22,0:22:60.14:0,60,639	0/0:28,0:29:68.87:0,69,706	0/0:22,0:22:55.82:0,56,604	1/1:7,0:24:14.64:117,15,0	1/1:3,0:30:33.46:182,33,0	0/1:3,1:20:14.81:136,0,15	0/0:17,0:17:42.08:0,42,438	0/0:30,0:30:75.16:0,75,798	0/0:27,0:27:72.17:0,72,766	0/0:18,0:18:39.04:0,39,406	0/0:24,0:24:66.16:0,66,702	0/0:32,0:32:93.20:0,93,973	0/0:10,0:10:3.52:0,4,203
chr10	17928734	.	T	TA	478.88	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.774;DP=615;FS=3.442;HRun=5;HaplotypeScore=84.1908;InbreedingCoeff=0.9826;MQ=71.70;MQ0=0;MQRankSum=-5.601;QD=21.77;ReadPosRankSum=0.162;VQSLOD=2.6961;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,99,1044	0/0:13,0:13:30.05:0,30,313	0/0:12,0:12:36.09:0,36,382	0/0:8,0:9:15.04:0,15,161	0/0:27,0:27:81.20:0,81,870	0/0:20,0:20:57.14:0,57,612	0/0:17,0:17:51.11:0,51,539	0/0:35,0:35:93.23:0,93,999	1/1:3,19:22:48.02:574,48,0	0/0:27,0:27:78.19:0,78,832	0/0:26,0:26:75.17:0,75,796	0/0:14,0:14:36.09:0,36,387	0/0:23,0:23:63.13:0,63,661	0/0:19,0:19:57.08:0,57,598	0/0:30,0:30:90.21:0,90,959	0/0:17,0:17:48.12:0,48,516	0/0:22,0:22:63.11:0,63,656	0/0:15,0:15:42.10:0,42,451	0/0:28,0:28:84.21:0,84,902	0/0:33,0:33:90.22:0,90,967	0/0:12,0:12:30.01:0,30,308	0/0:11,0:11:30.08:0,30,322	0/0:29,0:29:69.15:0,69,732	0/0:22,0:22:57.14:0,57,613	0/0:21,0:21:57.14:0,57,613	0/0:28,0:28:72.18:0,72,773	0/0:34,0:34:93.23:0,93,999	0/0:14,0:14:42.11:0,42,451
chr10	17928783	.	CA	C	7861.33	PASS	AB=0.579;AC=51;AF=0.911;AN=56;BaseQRankSum=-2.177;DP=579;FS=24.038;HRun=11;HaplotypeScore=82.2875;InbreedingCoeff=0.7340;MQ=74.35;MQ0=1;MQRankSum=-6.052;QD=14.56;ReadPosRankSum=5.833;VQSLOD=3.4146;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,30:38:56.96:602,57,0	1/1:0,10:10:26.96:222,27,0	0/0:18,0:18:19:0,19,183	0/0:20,0:18:24.99:0,25,208	1/1:5,22:27:56.88:467,57,0	1/1:2,17:20:43.98:351,44,0	1/1:3,14:18:14.98:319,15,0	1/1:9,0:29:40.72:120,41,0	1/1:4,0:13:16.27:47,16,0	1/1:7,22:30:67.95:548,68,0	1/1:4,12:17:31.98:252,32,0	1/1:2,9:12:23.01:178,23,0	1/1:3,13:17:14.88:309,15,0	1/1:4,19:23:56.92:468,57,0	1/1:3,15:18:37.77:301,38,0	1/1:2,17:19:44.94:370,45,0	1/1:2,19:23:55.01:430,55,0	1/1:1,11:13:34.96:272,35,0	1/1:4,0:21:31.79:93,32,0	1/1:2,0:27:29.97:106,30,0	1/1:2,0:16:19.21:56,19,0	1/1:2,12:14:29.94:246,30,0	1/1:6,21:27:23.98:393,24,0	1/1:4,16:22:52.47:407,52,0	1/1:4,13:17:7.96:265,8,0	1/1:5,16:23:45.98:357,46,0	0/1:9,23:33:22.99:431,0,23	1/1:2,10:13:31.98:252,32,0
chr10	17929353	.	C	CTTTTTT	976.82	PASS	AB=0.975;AC=17;AF=0.304;AN=56;BaseQRankSum=5.485;DP=564;FS=19.303;HRun=5;HaplotypeScore=156.4276;InbreedingCoeff=-0.3213;MQ=72.75;MQ0=11;MQRankSum=-5.103;QD=3.13;ReadPosRankSum=-1.513;VQSLOD=-0.6496;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:40:82.73:0,83,1411	0/0:6,0:6:14.09:0,14,173	0/0:58,0:31:2.47:0,2,182	0/1:46,0:19:25.78:26,0,84	0/0:29,0:29:28.56:0,29,322	0/0:13,0:12:4.31:0,4,117	0/1:12,0:12:20.69:21,0,107	1/1:29,0:30:51.51:388,52,0	0/1:9,0:9:22.93:23,0,31	0/0:27,0:26:13.05:0,13,337	0/1:31,0:31:38.64:39,0,314	0/0:12,0:12:25.17:0,25,276	0/1:19,0:17:31.31:31,0,195	0/1:7,0:7:17.60:18,0,114	0/1:10,0:10:37.51:50,0,38	0/1:15,0:14:81.01:123,0,81	0/0:19,0:19:1.19:0,1,157	0/1:8,5:12:64.55:65,0,177	0/1:17,0:15:44.97:45,0,97	0/1:22,0:24:99:121,0,152	0/0:6,0:6:9:0,9,86	0/0:14,0:13:17.09:0,17,145	0/0:17,0:17:13.58:0,14,247	0/1:12,0:12:13:13,0,133	0/1:23,0:23:79.59:80,0,293	0/1:18,0:18:51.10:51,0,166	0/1:21,0:19:45.05:45,0,237	0/0:10,0:8:17.50:0,18,162
chr10	17929357	.	TTCTTTTTC	T	2702.36	PASS	AB=1.000;AC=14;AF=0.250;AN=56;BaseQRankSum=2.284;DP=532;FS=0.429;HRun=0;HaplotypeScore=147.1216;InbreedingCoeff=0.5356;MQ=70.10;MQ0=11;MQRankSum=-5.402;QD=13.12;ReadPosRankSum=-5.656;VQSLOD=0.0897;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:34:74.08:0,74,2874	0/0:6,0:6:18.04:0,18,381	0/1:53,0:27:20.72:21,0,270	0/1:44,0:17:27.78:28,0,52	0/0:31,0:31:51.11:0,51,1151	0/0:13,0:12:17.75:0,18,740	0/0:11,0:11:31.90:0,32,694	1/1:31,0:31:80.88:876,81,0	1/1:8,0:8:17.69:170,18,0	0/0:26,0:25:3.62:0,4,1188	0/0:30,0:29:33.66:0,34,1312	0/0:12,0:12:33.03:0,33,714	0/0:18,0:16:0.43:0,0,771	0/1:7,0:7:5.91:6,0,427	0/0:9,0:9:24.08:0,24,597	0/0:14,0:13:20:0,20,552	0/0:18,0:18:22.98:0,23,927	0/0:12,0:11:21.05:0,21,473	1/1:4,9:11:24:497,24,0	1/1:7,18:23:54.08:1083,54,0	1/1:2,4:6:8.96:176,9,0	0/0:13,0:12:16.03:0,16,830	0/0:15,0:15:28.18:0,28,919	0/0:11,0:11:24.08:0,24,481	0/0:23,0:22:33.10:0,33,752	0/1:18,0:18:23.41:23,0,791	0/0:20,0:18:25.16:0,25,922	0/0:9,0:7:4.36:0,4,409
chr10	17929358	.	TC	T	711.08	PASS	AB=0.957;AC=12;AF=0.214;AN=56;BaseQRankSum=5.748;DP=526;FS=6.305;HRun=1;HaplotypeScore=98.5797;InbreedingCoeff=0.2544;MQ=69.30;MQ0=11;MQRankSum=-5.416;QD=4.47;ReadPosRankSum=-2.656;VQSLOD=-0.7204;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:35:89.69:0,90,1163	0/0:6,0:6:17.90:0,18,204	0/0:52,0:25:7.18:0,7,238	0/0:43,1:17:0.95:0,1,67	0/0:31,0:31:51.10:0,51,609	0/0:14,0:13:17.99:0,18,346	0/0:11,0:11:32.11:0,32,366	0/1:32,0:32:99:158,0,124	1/1:8,0:8:17.52:162,18,0	0/0:25,1:25:7.48:0,7,506	0/1:28,0:27:13.15:13,0,625	0/0:12,0:12:28.72:0,29,325	0/1:18,0:16:36.35:36,0,295	0/0:7,0:7:7.78:0,8,198	0/0:9,0:9:1.63:0,2,209	0/0:12,1:12:3.38:0,3,188	0/0:17,1:18:27.75:0,28,521	0/0:12,0:11:20.92:0,21,247	1/1:10,0:8:18.64:113,19,0	1/1:25,0:23:51.06:320,51,0	0/1:5,0:6:9.39:29,0,9	0/0:13,0:12:30.02:0,30,362	0/1:14,1:15:26.83:27,0,426	0/0:11,0:11:21.52:0,22,261	0/0:23,0:22:33.07:0,33,416	0/1:16,1:17:15.24:15,0,336	0/0:20,0:18:26.29:0,26,452	0/0:9,0:7:3.95:0,4,209
chr10	17931243	.	CTT	C	792.82	PASS	AB=1.000;AC=10;AF=0.179;AN=56;BaseQRankSum=0.090;DP=436;FS=0.620;HRun=13;HaplotypeScore=64.1856;InbreedingCoeff=0.7084;MQ=63.95;MQ0=15;MQRankSum=-2.198;QD=9.67;ReadPosRankSum=0.171;VQSLOD=1.6162;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:33.84:0,34,400	0/0:7,0:7:21.04:0,21,281	0/0:52,0:19:28.68:0,29,212	0/0:38,0:11:2.98:0,3,21	0/1:13,0:13:1.04:1,0,271	0/0:16,0:15:24.03:0,24,303	0/0:6,0:6:6.02:0,6,87	1/1:4,13:16:31.84:272,32,0	0/0:15,0:15:3:0,3,25	0/0:10,0:10:24:0,24,298	0/0:17,0:20:37.24:0,37,390	0/0:12,0:12:23.72:0,24,223	0/0:6,0:6:14.94:0,15,183	0/0:6,0:5:9:0,9,93	0/1:14,0:14:1.46:1,0,236	0/0:9,0:9:14.84:0,15,176	0/0:28,0:27:55.35:0,55,730	0/0:21,0:20:31.70:0,32,379	1/1:16,2:18:38.43:323,38,0	1/1:4,9:12:34.62:268,35,0	1/1:6,0:6:8.99:80,9,0	0/0:5,0:5:11.92:0,12,106	0/0:14,0:12:32.50:0,32,353	0/0:8,0:9:23.27:0,23,267	0/0:17,0:17:24.54:0,25,307	0/0:16,0:16:41.46:0,41,450	0/0:10,0:10:18.20:0,18,267	0/0:14,0:14:14.62:0,15,165
chr10	17931255	.	TTC	T	589.35	PASS	AB=0.994;AC=14;AF=0.259;AN=54;BaseQRankSum=2.593;DP=386;FS=0.000;HRun=0;HaplotypeScore=59.3585;InbreedingCoeff=0.3198;MQ=55.92;MQ0=16;MQRankSum=-3.952;QD=4.43;ReadPosRankSum=-3.086;VQSLOD=0.6538;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:23.95:0,24,143	0/0:6,0:6:17.99:0,18,185	0/0:41,0:10:3.24:0,3,83	./.	0/1:14,0:12:3.88:4,0,135	0/0:15,0:14:1.98:0,2,220	0/0:5,0:5:4.88:0,5,82	1/1:17,1:17:29.12:172,29,0	0/0:1,0:1:2.04:0,2,6	0/0:8,0:8:20.20:0,20,207	0/0:18,0:17:13.02:0,13,259	0/1:12,0:12:24.66:58,0,25	0/0:7,0:6:13.12:0,13,99	0/0:6,0:5:4.57:0,5,32	0/1:10,0:10:21.86:22,0,140	0/0:10,0:8:7.01:0,7,91	0/1:27,1:26:20.21:20,0,355	0/0:22,0:21:14.39:0,14,234	1/1:16,1:17:34.40:188,34,0	1/1:15,1:15:39.30:259,39,0	1/1:4,0:4:4.29:19,4,0	0/1:4,0:4:0.69:1,0,33	0/0:15,0:13:27.40:0,27,218	0/1:10,0:10:2.60:3,0,149	0/0:12,0:12:18.52:0,19,166	0/0:16,0:16:25.61:0,26,261	0/0:9,0:9:2.28:0,2,130	0/0:11,0:11:22.48:0,22,233
chr10	17931436	.	T	TAA	6199.69	PASS	AB=0.563;AC=45;AF=0.804;AN=56;BaseQRankSum=-1.743;DP=387;FS=0.656;HRun=12;HaplotypeScore=62.6005;InbreedingCoeff=0.6068;MQ=65.62;MQ0=0;MQRankSum=-2.997;QD=20.00;ReadPosRankSum=0.872;VQSLOD=4.0164;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:29:59.32:0,59,517	1/1:0,9:10:23.57:303,24,0	0/0:13,0:12:11.85:0,12,109	0/0:12,0:8:5.91:0,6,53	1/1:0,6:7:21.01:250,21,0	1/1:2,8:11:17.54:211,18,0	1/1:5,13:19:26.24:314,26,0	1/1:11,0:27:8.79:132,9,0	1/1:1,0:6:3:28,3,0	1/1:5,9:16:29.56:360,30,0	1/1:2,7:9:21.02:272,21,0	0/0:22,0:22:44.85:0,45,416	1/1:0,9:10:17.55:219,18,0	1/1:1,18:20:46.24:634,46,0	1/1:0,5:9:20.54:219,21,0	1/1:1,11:14:32.54:407,33,0	1/1:2,12:15:24.08:333,24,0	1/1:4,11:19:7.34:341,7,0	0/1:5,0:14:27.19:49,0,27	0/1:2,0:11:4.14:46,0,4	1/1:3,0:12:17.57:62,18,0	0/1:1,6:9:4.31:179,0,4	1/1:2,5:9:20.50:237,21,0	1/1:0,13:15:32.54:393,33,0	1/1:2,8:10:15.05:210,15,0	1/1:0,10:10:27.06:358,27,0	1/1:4,9:15:23.57:303,24,0	1/1:2,11:13:24.08:336,24,0
chr10	17937748	.	C	CA	12566.91	PASS	AB=0.875;AC=54;AF=0.964;AN=56;BaseQRankSum=0.676;DP=624;FS=3.979;HRun=3;HaplotypeScore=240.6820;InbreedingCoeff=0.2268;MQ=61.40;MQ0=0;MQRankSum=-3.553;QD=20.14;ReadPosRankSum=3.028;VQSLOD=4.1724;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,28:36:73.86:525,74,0	1/1:6,10:17:24.80:199,25,0	0/1:5,3:9:16.57:140,0,17	0/1:10,0:10:3.08:3,0,164	1/1:2,12:14:9.01:98,9,0	1/1:4,11:15:41.27:355,41,0	1/1:5,19:24:47.34:387,47,0	1/1:4,13:17:32.93:292,33,0	1/1:8,20:28:77.54:817,78,0	1/1:6,15:21:47.40:432,47,0	1/1:2,14:16:29.22:229,29,0	1/1:7,27:34:80.60:795,81,0	1/1:6,18:24:64.35:550,64,0	1/1:5,33:38:99:1069,101,0	1/1:9,32:41:99:1063,107,0	1/1:4,14:18:47.89:517,48,0	1/1:7,24:30:66.88:620,67,0	1/1:5,18:23:56.94:577,57,0	1/1:8,21:29:77.05:753,77,0	1/1:5,18:23:39.01:398,39,0	1/1:8,27:35:60.34:563,60,0	1/1:4,11:15:29.82:241,30,0	1/1:2,8:10:15.60:93,16,0	1/1:2,23:25:47.55:454,48,0	1/1:4,12:16:20.71:161,21,0	1/1:7,21:28:62.71:604,63,0	1/1:4,18:21:58.17:517,58,0	1/1:1,4:5:11.98:114,12,0
chr10	17937753	.	TG	T	12342.64	PASS	AB=0.846;AC=55;AF=0.982;AN=56;BaseQRankSum=0.180;DP=611;FS=8.621;HRun=3;HaplotypeScore=221.5789;InbreedingCoeff=-0.0274;MQ=65.99;MQ0=0;MQRankSum=-3.456;QD=20.20;ReadPosRankSum=1.975;VQSLOD=3.2737;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,28:33:80.70:601,81,0	1/1:1,13:14:20.22:242,20,0	1/1:5,7:12:1.73:202,2,0	0/1:9,2:11:34.83:35,0,106	1/1:2,10:12:21.06:247,21,0	1/1:4,10:14:33.87:256,34,0	1/1:1,25:26:54.46:422,54,0	1/1:8,12:20:44.50:364,45,0	1/1:8,19:27:71.37:691,71,0	1/1:2,19:21:35.13:300,35,0	1/1:3,14:17:24.20:232,24,0	1/1:6,28:34:97.26:876,97,0	1/1:5,20:25:64.28:484,64,0	1/1:3,32:35:95.31:869,95,0	1/1:5,33:38:99:937,106,0	1/1:6,14:20:53.19:514,53,0	1/1:6,23:28:67.36:592,67,0	1/1:1,19:20:56.42:503,56,0	1/1:4,24:28:76.55:718,77,0	1/1:6,17:23:38.07:387,38,0	1/1:5,27:32:69.92:651,70,0	1/1:4,12:16:37:303,37,0	1/1:2,9:11:14.73:142,15,0	1/1:4,23:27:53.67:486,54,0	1/1:4,11:15:28.94:223,29,0	1/1:4,20:24:55.21:460,55,0	1/1:3,19:22:64.38:506,64,0	1/1:1,4:5:11.84:95,12,0
chr10	17938370	.	T	TAGTTCAGCATAAGCAACAGTGGCAG	2266.99	PASS	AB=0.767;AC=28;AF=0.933;AN=30;BaseQRankSum=-3.452;DP=49;FS=8.804;HRun=0;HaplotypeScore=42.2210;InbreedingCoeff=-0.2316;MQ=149.23;MQ0=0;MQRankSum=-1.994;QD=52.72;ReadPosRankSum=-0.584;VQSLOD=0.2449;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,0:2:3.01:75,3,0	./.	0/1:4,1:7:42.93:668,0,43	0/1:8,1:10:65.42:639,0,65	1/1:1,0:2:3.01:73,3,0	./.	1/1:2,0:3:6.02:115,6,0	./.	1/1:0,0:1:3.01:73,3,0	1/1:1,0:1:3.01:58,3,0	./.	./.	1/1:4,0:5:12.04:271,12,0	1/1:2,0:2:3.01:50,3,0	1/1:3,0:3:9:122,9,0	./.	./.	./.	./.	1/1:2,0:2:3.01:40,3,0	1/1:1,0:1:2.99:24,3,0	./.	./.	1/1:2,0:2:2.97:20,3,0	./.	1/1:1,0:1:3.01:47,3,0	./.	1/1:1,0:1:3.01:81,3,0
chr10	18049257	.	A	ATGTG	37117.39	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-6.918;DP=654;FS=4.577;HRun=0;HaplotypeScore=102.5993;InbreedingCoeff=0.9826;MQ=78.81;MQ0=3;MQRankSum=-9.331;QD=60.06;ReadPosRankSum=5.619;VQSLOD=6.5546;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,23:25:50.82:1374,51,0	1/1:2,12:14:27.09:728,27,0	0/0:16,0:16:45.11:0,45,766	0/0:20,0:20:48.15:0,48,835	1/1:1,26:27:48.16:1295,48,0	1/1:2,15:18:33.11:890,33,0	1/1:8,13:22:42.14:1131,42,0	1/1:15,23:43:99:2502,105,0	1/1:2,21:25:57.20:1534,57,0	1/1:3,21:24:66.23:1782,66,0	1/1:5,17:22:48.16:1295,48,0	1/1:2,22:24:45.15:1213,45,0	1/1:0,30:30:75.26:2024,75,0	1/1:3,19:22:45.15:1212,45,0	1/1:2,25:26:63.22:1700,63,0	1/1:2,20:21:57.20:1529,57,0	1/1:2,24:26:57.19:1513,57,0	1/1:3,6:9:12.04:324,12,0	1/1:5,18:25:75.25:1795,75,0	1/1:3,25:29:65.87:1779,66,0	1/1:0,12:12:24.08:648,24,0	1/1:2,27:29:60.21:1618,60,0	1/1:1,24:25:62.91:1699,63,0	1/1:4,22:26:45.15:1215,45,0	1/1:4,17:21:48.16:1295,48,0	1/1:2,16:19:51.16:1213,51,0	1/1:2,34:37:99:2674,101,0	1/1:0,14:14:42.14:1134,42,0
chr10	18049589	.	G	GATC	2527.84	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-3.721;DP=746;FS=0.000;HRun=0;HaplotypeScore=104.9857;InbreedingCoeff=0.9999;MQ=87.56;MQ0=0;MQRankSum=-3.447;QD=51.59;ReadPosRankSum=0.999;VQSLOD=5.6744;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,42:49:99:2623,117,0	0/0:13,0:13:39.11:0,39,622	0/0:27,0:27:72.02:0,72,1047	0/0:26,0:26:58.19:0,58,1108	0/0:31,0:31:75.12:0,75,1243	0/0:23,0:23:63.22:0,63,1046	0/0:17,0:17:48.16:0,48,797	0/0:43,0:43:99:0,111,1845	0/0:31,0:31:90.31:0,90,1499	0/0:16,0:16:48.15:0,48,776	0/0:20,0:20:45.14:0,45,725	0/0:27,0:27:75.24:0,75,1224	0/0:24,0:24:69.24:0,69,1148	0/0:35,0:35:99:0,102,1672	0/0:32,0:32:96.33:0,96,1597	0/0:31,0:31:90.31:0,90,1497	0/0:35,0:35:99:0,99,1608	0/0:15,0:15:45.15:0,45,749	0/0:23,0:23:63.21:0,63,1026	0/0:26,0:26:75.24:0,75,1221	0/0:31,0:31:90.29:0,90,1473	0/0:19,0:19:57.19:0,57,947	0/0:29,0:29:81.28:0,81,1345	0/0:26,0:26:75.23:0,75,1196	0/0:22,0:21:66.22:0,66,1082	0/0:27,0:27:75.26:0,75,1250	0/0:34,0:34:99:0,99,1622	0/0:14,0:14:42.14:0,42,700
chr10	18050050	.	G	GAA	9440.18	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-2.227;DP=581;FS=0.354;HRun=9;HaplotypeScore=79.4347;InbreedingCoeff=0.9789;MQ=68.77;MQ0=5;MQRankSum=-0.220;QD=26.22;ReadPosRankSum=-3.118;VQSLOD=4.1064;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:23:9.99:98,10,0	1/1:3,8:12:32.55:426,33,0	0/0:23,0:19:7.47:0,7,176	0/0:15,0:14:30.01:0,30,301	1/1:8,19:28:73.92:1007,74,0	0/0:29,0:29:75.14:0,75,782	0/0:23,0:23:57.12:0,57,606	1/1:10,2:17:37.26:366,37,0	0/0:22,0:22:32.07:0,32,521	1/1:9,16:25:54.09:763,54,0	1/1:5,15:20:32.97:417,33,0	0/0:21,0:21:54.10:0,54,567	1/1:2,19:21:42.14:638,42,0	1/1:1,14:15:39:569,39,0	0/0:23,0:22:56.74:0,57,606	0/0:27,0:27:69.16:0,69,734	1/1:4,8:11:18.06:277,18,0	0/0:14,0:15:41.83:0,42,427	1/1:3,2:15:38.96:360,39,0	1/1:5,22:26:54.41:671,54,0	1/1:1,0:14:33.06:324,33,0	1/1:5,10:16:38.53:510,39,0	1/1:8,14:24:41.63:591,42,0	1/1:3,16:22:32.59:436,33,0	0/0:22,0:22:60.11:0,60,630	1/1:3,22:25:63.18:922,63,0	1/1:4,22:28:56.63:781,57,0	1/1:3,8:12:20.56:286,21,0
chr10	18050151	.	T	TTC	876.38	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.585;DP=605;FS=26.548;HRun=0;HaplotypeScore=81.3352;InbreedingCoeff=0.8871;MQ=84.09;MQ0=0;MQRankSum=-4.520;QD=46.13;ReadPosRankSum=-2.697;VQSLOD=1.9388;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,18:18:54.18:971,54,0	0/0:12,0:12:30.09:0,30,437	0/0:15,0:15:39.82:0,40,559	0/0:23,0:23:63.15:0,63,875	0/0:15,0:15:45.15:0,45,689	0/0:27,0:27:81.26:0,81,1217	0/0:28,0:28:84.27:0,84,1253	0/0:27,0:27:78.23:0,78,1162	0/0:27,0:27:75.25:0,75,1147	0/0:18,0:18:51.17:0,51,774	0/0:18,0:18:54.18:0,54,824	0/0:28,0:28:84.27:0,84,1265	0/0:25,0:25:75.24:0,75,1125	0/0:18,0:18:54.18:0,54,827	0/0:36,0:36:99:0,105,1587	0/0:30,0:30:90.30:0,90,1359	0/0:21,0:21:63.21:0,63,964	0/0:6,0:6:18.06:0,18,276	0/0:16,0:16:39.12:0,39,575	0/0:26,0:26:66.21:0,66,989	0/0:34,0:34:96.31:0,96,1448	0/0:16,0:16:45.15:0,45,687	0/0:16,0:16:48.15:0,48,715	0/0:33,0:33:96.33:0,96,1466	0/0:16,0:16:42.14:0,42,643	0/0:21,1:22:5.35:0,5,857	0/0:22,0:22:66.21:0,66,985	0/0:11,0:11:33.11:0,33,505
chr10	18050174	.	AACACATATT	A	840.82	PASS	AB=0.963;AC=3;AF=0.054;AN=56;BaseQRankSum=6.017;DP=649;FS=29.018;HRun=0;HaplotypeScore=184.2199;InbreedingCoeff=0.6471;MQ=82.54;MQ0=0;MQRankSum=-5.856;QD=20.51;ReadPosRankSum=0.552;VQSLOD=1.5461;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,12:14:33.11:927,33,0	0/0:12,0:12:36.12:0,36,1503	0/0:31,0:31:81.28:0,81,3451	0/0:33,0:33:77.59:0,78,3125	0/0:17,0:17:45.15:0,45,1968	0/0:28,0:28:66.23:0,66,3047	0/0:31,0:31:87.30:0,87,3896	0/0:34,0:34:90.30:0,90,3946	0/0:26,0:26:78.27:0,78,3466	0/0:25,0:25:75.26:0,75,3418	0/0:18,0:18:48.16:0,48,2177	0/0:29,0:29:87.30:0,87,4011	0/0:27,0:27:78.27:0,78,3388	0/0:23,0:23:69.24:0,69,3204	0/0:32,0:32:90.31:0,90,4166	0/0:28,0:28:75.26:0,75,3482	0/0:22,0:22:54.19:0,54,2507	0/0:8,0:8:24.08:0,24,1091	0/0:13,0:13:36.12:0,36,1466	0/0:31,0:31:90.31:0,90,4170	0/0:35,0:35:99:0,99,4304	0/0:13,0:13:33.11:0,33,1390	0/0:16,0:16:42.14:0,42,2000	0/0:29,0:29:84.27:0,84,3749	0/0:18,0:18:51.17:0,51,2164	0/1:25,1:26:19.60:20,0,2845	0/0:21,0:21:60.19:0,60,2690	0/0:8,0:8:21.07:0,21,1000
chr10	18050255	.	ACTTTT	A	588.96	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.319;DP=709;FS=0.000;HRun=0;HaplotypeScore=140.2164;InbreedingCoeff=0.9987;MQ=83.12;MQ0=0;MQRankSum=-3.996;QD=34.64;ReadPosRankSum=0.569;VQSLOD=3.5974;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,15:17:33.11:684,33,0	0/0:10,0:10:30.10:0,30,922	0/0:21,0:21:51.17:0,51,1383	0/0:23,0:23:50.56:0,51,1446	0/0:29,0:29:69.24:0,69,2110	0/0:26,0:26:69.24:0,69,2120	0/0:23,0:23:69.24:0,69,2079	0/0:47,0:47:99:0,126,3788	0/0:23,0:23:69.24:0,69,2120	0/0:34,0:34:99:0,99,3027	0/0:27,0:27:81.28:0,81,2442	0/0:32,0:32:93.30:0,93,2632	0/0:38,0:38:99:0,108,3072	0/0:17,0:17:45.15:0,45,1327	0/0:24,0:24:69.22:0,69,2019	0/0:31,0:31:93.30:0,93,2777	0/0:30,0:30:87.30:0,87,2630	0/0:11,0:11:33.11:0,33,990	0/0:24,0:24:63.21:0,63,1872	0/0:37,0:37:99:0,105,3183	0/0:22,0:22:54.19:0,54,1638	0/0:20,0:20:60.21:0,60,1844	0/0:21,0:21:55.07:0,55,1647	0/0:27,0:27:75.26:0,75,2263	0/0:26,0:26:72.25:0,72,2168	0/0:29,0:29:84.09:0,84,2582	0/0:28,0:28:78.25:0,78,2311	0/0:12,0:12:33.11:0,33,1015
chr10	18050458	.	G	GACAAACCCACCAGTGT	102474.89	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-5.281;DP=728;FS=0.586;HRun=0;HaplotypeScore=275.9996;InbreedingCoeff=0.9340;MQ=74.17;MQ0=0;MQRankSum=-10.291;QD=151.14;ReadPosRankSum=4.923;VQSLOD=4.5590;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:17,14:32:87.30:5713,87,0	1/1:14,5:19:48.16:2888,48,0	0/0:23,0:23:54.18:0,54,1898	0/0:27,0:27:71.95:0,72,2225	1/1:7,11:20:48.16:3117,48,0	1/1:15,6:23:69.24:3982,69,0	1/1:15,3:23:45.15:2701,45,0	1/1:55,0:55:99:8545,150,0	1/1:17,9:27:66.23:4416,66,0	1/1:26,6:37:99:6240,105,0	1/1:15,6:23:39.13:2675,39,0	1/1:16,11:28:66.12:4145,66,0	1/1:19,12:34:90.18:5814,90,0	1/1:14,13:30:81.28:5837,81,0	1/1:14,14:29:75.17:5135,75,0	1/1:15,18:38:84.29:5442,84,0	1/1:7,7:15:36.08:2554,36,0	1/1:1,1:3:6.02:466,6,0	1/1:19,7:32:90.29:4177,90,0	1/1:18,6:27:63.17:3789,63,0	1/1:19,4:26:39.13:2743,39,0	1/1:11,8:20:48.16:2967,48,0	1/1:9,7:18:36.12:2322,36,0	1/1:16,5:25:36.12:2366,36,0	1/1:9,8:18:42.10:2852,42,0	1/1:18,12:33:93.32:5540,93,0	1/1:19,11:36:75.26:5214,75,0	1/1:3,3:6:12.04:835,12,0
chr10	18050536	.	TCATTTGCTGCTA	T	11948.20	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=15.075;DP=707;FS=8.574;HRun=0;HaplotypeScore=271.7332;InbreedingCoeff=0.9938;MQ=80.55;MQ0=0;MQRankSum=-13.646;QD=82.40;ReadPosRankSum=3.501;VQSLOD=3.0905;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,132,7650	0/0:11,0:11:26.91:0,27,1010	0/0:30,0:31:68.12:0,68,4431	0/0:16,0:16:43.13:0,43,2148	0/0:19,0:19:57.19:0,57,3253	1/1:5,15:20:42.14:1596,42,0	1/1:5,18:23:45.15:1704,45,0	0/0:41,0:41:99:0,120,6706	0/0:18,0:18:54.18:0,54,3186	0/0:40,0:40:99:0,117,6248	0/0:23,0:23:69.24:0,69,4088	1/1:8,17:24:42.14:1595,42,0	0/0:30,0:30:81.28:0,81,4652	0/0:28,0:28:81.21:0,81,4499	1/1:6,23:29:66.23:2508,66,0	1/1:6,21:27:66.23:2494,66,0	0/0:32,0:32:96.24:0,96,5550	1/1:2,5:6:12.04:456,12,0	0/0:18,0:18:51.18:0,51,2650	0/0:23,0:23:66.17:0,66,3267	0/0:45,0:45:99:0,132,7514	0/0:23,0:23:66.23:0,66,3624	0/0:21,0:21:57.19:0,57,3242	0/0:37,0:37:93.28:0,93,5425	1/1:0,14:14:42.14:1595,42,0	0/0:24,0:24:72.19:0,72,3787	0/0:28,0:28:72.16:0,72,4079	0/0:8,0:8:24.08:0,24,1489
chr10	18050944	.	GA	G	489.47	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.295;DP=722;FS=3.349;HRun=2;HaplotypeScore=67.3378;InbreedingCoeff=1.0000;MQ=81.57;MQ0=0;MQRankSum=-2.468;QD=25.76;ReadPosRankSum=0.276;VQSLOD=3.2273;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:68.77:0,69,536	0/0:18,0:18:54.18:0,54,808	0/0:24,0:24:69.10:0,69,955	0/0:25,0:25:45.42:0,45,899	0/0:26,0:26:78.25:0,78,1147	0/0:27,0:27:81.26:0,81,1185	0/0:23,0:23:66.22:0,66,971	0/0:43,0:43:99:0,123,1756	1/1:1,18:19:45.15:584,45,0	0/0:25,0:25:75.25:0,75,1124	0/0:24,0:24:72.24:0,72,1078	0/0:21,0:21:63.20:0,63,924	0/0:26,0:26:78.26:0,78,1169	0/0:20,0:20:60.20:0,60,899	0/0:28,0:28:84.28:0,84,1241	0/0:27,0:27:78.26:0,78,1151	0/0:24,0:24:69.17:0,69,986	0/0:18,0:18:54.17:0,54,783	0/0:20,0:20:54.18:0,54,809	0/0:29,0:29:87.29:0,87,1282	0/0:34,0:33:99:0,99,1484	0/0:24,0:24:69.23:0,69,1033	0/0:28,0:28:84.28:0,84,1257	0/0:34,0:34:99:0,102,1529	0/0:20,0:20:60.20:0,60,899	0/0:34,0:34:99:0,99,1466	0/0:35,0:35:99:0,105,1526	0/0:22,0:22:66.16:0,66,942
chr10	18051482	.	GCTTAAGA	G	5478.04	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=12.964;DP=677;FS=7.791;HRun=0;HaplotypeScore=154.9833;InbreedingCoeff=0.9971;MQ=89.86;MQ0=0;MQRankSum=-9.821;QD=50.26;ReadPosRankSum=-2.655;VQSLOD=3.8414;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:78.27:0,78,3002	0/0:6,0:6:18.06:0,18,573	0/0:32,0:32:78.25:0,78,2480	0/0:24,0:24:60.20:0,60,2003	0/0:23,0:23:63.22:0,63,2403	0/0:29,0:29:84.26:0,84,3106	0/0:20,0:20:54.19:0,54,1986	1/1:6,22:28:63.22:1502,63,0	0/0:26,0:26:75.26:0,75,2867	0/0:26,0:26:75.25:0,75,2585	0/0:19,0:19:57.20:0,57,2083	0/0:29,0:29:78.27:0,78,2976	0/0:20,0:20:57.20:0,57,2237	0/0:17,0:17:48.16:0,48,1804	0/0:31,0:31:84.27:0,84,3048	0/0:29,0:29:84.27:0,84,3129	0/0:17,0:17:48.16:0,48,1878	0/0:14,0:14:40.38:0,40,1386	1/1:3,20:23:63.19:1398,63,0	1/1:2,32:34:90.31:2126,90,0	1/1:4,20:24:23.82:451,24,0	0/0:17,0:17:51.18:0,51,1941	0/0:25,0:25:66.23:0,66,2489	0/0:18,0:18:51.18:0,51,1869	0/0:33,0:33:96.33:0,96,3603	0/0:25,0:25:72.25:0,72,2590	0/0:46,0:45:99:0,138,5127	0/0:13,0:13:39.13:0,39,1493
chr10	18052845	.	T	TC	6630.39	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-13.451;DP=586;FS=16.735;HRun=7;HaplotypeScore=74.9409;InbreedingCoeff=0.9657;MQ=92.63;MQ0=0;MQRankSum=-3.786;QD=26.95;ReadPosRankSum=2.788;VQSLOD=3.7662;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:57.06:0,57,543	1/1:3,6:9:18.06:217,18,0	0/0:25,0:24:54.08:0,54,517	0/0:27,0:27:57.03:0,57,535	1/1:2,17:19:48.04:543,48,0	0/0:29,0:29:81.05:0,81,764	0/0:24,0:24:51.04:0,51,487	0/0:43,0:43:99:0,105,1005	0/0:13,0:13:30.02:0,30,279	1/1:1,21:22:63.10:705,63,0	1/1:3,10:13:1.18:297,1,0	0/0:17,0:17:48.06:0,48,459	1/1:1,21:22:42:507,42,0	1/1:2,16:18:39.09:457,39,0	0/0:24,0:24:63.08:0,63,603	0/0:14,0:14:39.06:0,39,377	1/1:3,22:25:63.15:745,63,0	0/0:12,0:12:24.03:0,24,232	0/0:27,0:27:51.07:0,51,487	0/0:25,0:25:69.09:0,69,663	0/0:18,0:18:48.06:0,48,463	1/1:5,9:14:21.06:253,21,0	1/1:0,14:14:33.10:398,33,0	1/1:1,23:24:57.17:689,57,0	0/0:19,0:19:48.07:0,48,463	1/1:6,21:27:60.11:673,60,0	1/1:4,29:33:78.22:929,78,0	1/1:0,6:6:18.06:217,18,0
chr10	18053404	.	TA	T	209.67	PASS	AB=0.891;AC=6;AF=0.107;AN=56;BaseQRankSum=-1.422;DP=503;FS=8.989;HRun=15;HaplotypeScore=180.1875;InbreedingCoeff=0.1779;MQ=60.02;MQ0=2;MQRankSum=-1.426;QD=2.10;ReadPosRankSum=-0.380;VQSLOD=0.1622;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,13:17:35.34:230,35,0	0/0:9,0:9:11.30:0,11,69	0/1:23,0:14:6.71:7,0,66	0/0:17,0:14:8.57:0,9,66	0/0:28,0:29:57.21:0,57,253	0/0:23,2:23:36.16:0,36,164	0/0:22,1:24:43.29:0,43,199	0/1:20,6:26:39.67:40,0,131	0/0:11,0:11:17.27:0,17,98	0/0:19,0:19:24.08:0,24,118	0/0:13,0:14:25.39:0,25,118	0/0:13,1:14:0.95:0,1,58	0/0:16,0:16:16.24:0,16,82	0/0:12,0:14:20.20:0,20,117	0/0:17,0:17:27.77:0,28,120	0/0:28,0:28:33.41:0,33,152	0/0:8,0:9:11.02:0,11,49	0/0:6,0:6:8.39:0,8,38	0/0:16,1:16:11.71:0,12,110	0/1:21,4:25:48.74:49,0,104	0/1:7,1:7:7.69:8,0,26	0/0:10,0:13:3.19:0,3,57	0/0:24,0:26:28.94:0,29,145	0/0:19,0:18:27.26:0,27,123	0/0:30,0:30:36.34:0,36,149	0/0:23,0:23:31.99:0,32,147	0/0:18,0:19:24.51:0,25,130	0/0:4,0:4:8.29:0,8,37
chr10	18053412	.	A	AC	2293.03	PASS	AB=0.672;AC=20;AF=0.357;AN=56;BaseQRankSum=7.667;DP=526;FS=128.490;HRun=0;HaplotypeScore=149.7382;InbreedingCoeff=0.5068;MQ=58.44;MQ0=2;MQRankSum=-6.552;QD=10.38;ReadPosRankSum=3.591;VQSLOD=0.6302;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:46.82:0,47,323	0/1:4,6:10:10.95:90,0,11	0/0:29,0:17:44.11:0,44,346	0/0:17,0:12:23.67:0,24,211	1/1:8,19:27:55.05:391,55,0	0/0:24,0:22:41.52:0,42,298	0/0:26,0:26:53.18:0,53,380	0/0:28,0:28:52.68:0,53,276	0/0:12,0:12:19.91:0,20,122	1/1:10,10:20:2.40:224,2,0	1/1:4,10:14:37.16:214,37,0	0/0:13,0:13:29.66:0,30,213	0/1:8,8:16:9.56:170,0,10	0/1:8,8:16:22.99:146,0,23	0/0:20,0:20:38.17:0,38,238	0/0:27,0:27:41.54:0,42,302	0/1:4,4:8:32.83:38,0,33	0/0:6,0:6:11.83:0,12,80	0/0:25,0:24:28.42:0,28,207	0/0:24,0:24:29.42:0,29,178	0/0:10,0:9:22.10:0,22,90	1/1:8,7:15:7.35:130,7,0	1/1:10,16:26:48.93:336,49,0	0/1:13,9:21:32.48:168,0,32	0/0:27,0:27:14.45:0,14,233	1/1:12,9:21:23.37:296,23,0	1/1:8,11:19:25.64:226,26,0	0/1:4,3:7:7.89:59,0,8
chr10	18053413	.	A	AC	545.88	PASS	AB=0.746;AC=7;AF=0.125;AN=56;BaseQRankSum=0.418;DP=528;FS=24.003;HRun=0;HaplotypeScore=155.6742;InbreedingCoeff=0.5039;MQ=58.34;MQ0=2;MQRankSum=-2.195;QD=5.25;ReadPosRankSum=0.397;VQSLOD=1.5123;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:16:16.90:103,17,0	0/0:11,0:11:29.10:0,29,163	0/0:29,0:17:43.88:0,44,332	0/0:17,0:12:1.04:0,1,160	0/0:26,0:26:71.73:0,72,360	0/0:25,0:23:41.59:0,42,306	0/0:27,0:27:52.89:0,53,381	0/1:18,10:28:91.17:159,0,91	0/0:12,0:12:20.04:0,20,130	0/0:21,0:21:45.37:0,45,224	0/0:14,0:14:40.11:0,40,212	0/0:15,0:15:29.56:0,30,207	0/0:14,0:14:39.65:0,40,212	0/0:16,0:16:44.80:0,45,242	0/0:19,0:19:35.21:0,35,218	0/0:27,0:27:41.61:0,42,311	0/0:8,0:8:19.32:0,19,99	0/0:6,0:6:11.88:0,12,84	0/1:19,7:25:98.97:99,0,171	1/1:12,12:24:13.75:223,14,0	0/1:6,4:9:3.94:100,0,4	0/0:15,0:15:31.16:0,31,184	0/0:27,0:27:63.15:0,63,337	0/0:22,0:21:43.70:0,44,227	0/0:27,0:27:25.80:0,26,254	0/0:20,0:20:43.94:0,44,207	0/0:19,0:19:43.25:0,43,256	0/0:7,0:7:16.93:0,17,91
chr10	18053415	.	A	AAAC	14401.44	PASS	AB=0.583;AC=49;AF=0.875;AN=56;BaseQRankSum=-1.325;DP=532;FS=18.155;HRun=0;HaplotypeScore=123.2624;InbreedingCoeff=0.7679;MQ=59.38;MQ0=2;MQRankSum=-4.475;QD=30.64;ReadPosRankSum=4.557;VQSLOD=4.2195;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:5.81:0,6,23	1/1:5,1:12:33.04:479,33,0	0/0:30,0:18:37.78:0,38,365	0/0:17,0:12:24.78:0,25,257	1/1:6,0:26:69:1127,69,0	1/1:4,19:24:39.04:650,39,0	1/1:4,17:26:20.12:669,20,0	1/1:20,10:30:65.81:726,66,0	0/1:4,1:14:28.19:142,0,28	1/1:11,0:21:54.99:725,55,0	1/1:5,0:15:39.05:643,39,0	1/1:4,10:15:14.84:345,15,0	1/1:5,0:13:32.79:473,33,0	1/1:8,0:16:30.11:606,30,0	1/1:0,17:19:36.11:620,36,0	1/1:1,22:29:38.61:668,39,0	1/1:4,0:8:17.80:207,18,0	1/1:1,4:6:9.01:172,9,0	1/1:22,7:28:62.78:717,63,0	1/1:12,12:24:51.95:612,52,0	1/1:5,4:8:20.78:270,21,0	1/1:10,0:16:44.60:545,45,0	1/1:8,0:24:68.83:1014,69,0	1/1:12,0:20:44.61:599,45,0	1/1:10,15:28:49.45:669,49,0	1/1:10,0:19:53.46:753,53,0	1/1:7,0:18:51.04:769,51,0	1/1:3,0:6:14.98:202,15,0
chr10	18054567	.	AT	A	415.50	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.292;DP=575;FS=3.628;HRun=5;HaplotypeScore=57.7157;InbreedingCoeff=0.9748;MQ=75.17;MQ0=0;MQRankSum=2.166;QD=18.89;ReadPosRankSum=-0.825;VQSLOD=3.0174;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,21:22:45.13:510,45,0	0/0:7,0:7:15.05:0,15,204	0/0:13,0:13:31.83:0,32,431	0/0:16,0:16:42.33:0,42,518	0/0:29,0:29:87.28:0,87,1174	0/0:20,0:20:57.18:0,57,762	0/0:29,0:29:78.25:0,78,1049	0/0:36,0:36:97.20:0,97,1301	0/0:20,0:20:57.18:0,57,763	0/0:26,0:26:72.24:0,72,985	0/0:19,0:19:54.14:0,54,717	0/0:21,0:21:63.17:0,63,840	0/0:24,0:24:69.18:0,69,907	0/0:14,0:14:36.12:0,36,492	0/0:19,0:19:51.17:0,51,697	0/0:21,0:21:51.13:0,51,662	0/0:16,0:16:45.14:0,45,599	0/0:11,0:11:27:0,27,310	0/0:19,0:19:57.15:0,57,759	0/0:22,0:22:60.11:0,60,777	0/0:6,0:6:18.06:0,18,246	0/0:20,0:20:57.19:0,57,774	0/0:18,0:18:54.18:0,54,737	0/0:10,0:10:30.10:0,30,410	0/0:27,0:27:78.25:0,78,1051	0/0:34,0:34:96.32:0,96,1313	0/0:36,0:36:99:0,102,1373	0/0:20,0:20:57.19:0,57,779
chr10	18055479	.	T	TA	11644.65	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-18.308;DP=632;FS=20.786;HRun=3;HaplotypeScore=69.5055;InbreedingCoeff=0.9977;MQ=89.04;MQ0=0;MQRankSum=-3.074;QD=39.74;ReadPosRankSum=2.067;VQSLOD=2.8472;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:84.26:0,84,1041	1/1:1,12:13:36.12:514,36,0	0/0:24,0:24:66.15:0,66,776	0/0:24,0:24:63.18:0,63,774	1/1:3,27:30:78.26:1108,78,0	0/0:24,0:24:69.20:0,69,837	0/0:13,0:13:36.11:0,36,446	0/0:26,0:26:75.22:0,75,917	0/0:29,0:29:84.26:0,84,1041	1/1:2,28:30:84.22:1168,84,0	1/1:1,21:22:63.17:884,63,0	0/0:24,0:24:63.20:0,63,780	1/1:0,14:14:39.13:562,39,0	1/1:1,15:16:39.13:562,39,0	0/0:31,0:31:93.29:0,93,1152	0/0:25,0:25:72.21:0,72,880	1/1:0,25:25:75.25:1080,75,0	0/0:5,0:5:15.05:0,15,185	0/0:23,0:23:66.21:0,66,818	0/0:28,0:28:78.21:0,78,940	0/0:18,0:18:54.17:0,54,670	1/1:1,25:26:75.25:1073,75,0	1/1:2,18:20:48.16:691,48,0	1/1:0,23:23:60.20:864,60,0	0/0:16,0:16:48.15:0,48,595	1/1:0,32:32:96.32:1375,96,0	1/1:1,30:30:90.30:1289,90,0	1/1:0,11:11:33.11:475,33,0
chr10	18055566	.	CCAGCTGTTTTTAGTTTT	C	1747.12	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.626;DP=563;FS=2.509;HRun=0;HaplotypeScore=249.5021;InbreedingCoeff=0.9897;MQ=77.85;MQ0=0;MQRankSum=-5.913;QD=124.79;ReadPosRankSum=2.846;VQSLOD=3.1434;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:75.26:0,75,6106	0/0:9,0:9:27.09:0,27,2137	0/0:14,0:13:39.12:0,39,2050	0/0:14,0:14:42.14:0,42,2262	0/0:34,0:34:99:0,102,7936	0/0:22,0:22:66.23:0,66,5149	0/0:14,0:14:42.14:0,42,3302	0/0:25,0:25:75.24:0,75,4969	1/1:0,14:14:36.12:1842,36,0	0/0:23,0:23:69.24:0,69,5552	0/0:24,0:24:66.23:0,66,4802	0/0:25,0:25:75.26:0,75,5619	0/0:20,0:20:57.20:0,57,4627	0/0:16,0:16:45.15:0,45,3799	0/0:22,0:21:66.23:0,66,4857	0/0:18,0:18:54.19:0,54,4472	0/0:19,0:19:57.20:0,57,4274	0/0:6,0:6:18.06:0,18,1260	0/0:27,0:27:81.28:0,81,5478	0/0:33,0:33:99:0,99,7586	0/0:9,0:9:27.09:0,27,2003	0/0:17,0:17:48.16:0,48,3897	0/0:22,0:22:61.45:0,61,4723	0/0:20,0:20:54.19:0,54,4241	0/0:21,0:21:63.22:0,63,4952	0/0:25,0:25:75.26:0,75,5631	0/0:33,0:33:96.33:0,96,7258	0/0:12,0:12:36.12:0,36,3059
chr10	18056049	.	T	TA	13491.07	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-6.314;DP=573;FS=3.510;HRun=8;HaplotypeScore=62.6495;InbreedingCoeff=0.9733;MQ=81.73;MQ0=0;MQRankSum=-9.118;QD=25.08;ReadPosRankSum=5.500;VQSLOD=5.3504;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,14:15:30.09:346,30,0	1/1:2,12:14:36.11:415,36,0	0/0:22,0:22:56.21:0,56,496	0/0:13,0:13:29.90:0,30,259	1/1:1,42:43:99:1367,123,0	1/1:4,2:30:59.82:323,60,0	1/1:0,0:9:22.73:116,23,0	1/1:4,15:19:42.05:439,42,0	1/1:4,17:21:51.13:576,51,0	1/1:5,21:26:66.06:742,66,0	1/1:6,25:31:75.05:816,75,0	1/1:0,0:10:22.63:125,23,0	1/1:1,22:24:66.20:761,66,0	1/1:1,18:19:48.14:554,48,0	1/1:3,0:20:42.61:217,43,0	1/1:5,2:26:59.91:326,60,0	1/1:2,14:16:39.12:450,39,0	1/1:1,2:7:17.17:105,17,0	1/1:5,27:32:87.25:993,87,0	1/1:6,31:37:96.24:1085,96,0	1/1:1,10:11:27.08:312,27,0	1/1:1,21:22:60.09:675,60,0	1/1:4,23:27:63:709,63,0	1/1:0,15:15:45.13:519,45,0	1/1:1,0:19:48.33:246,48,0	1/1:2,21:23:57.17:658,57,0	1/1:3,14:18:20.65:479,21,0	1/1:0,4:4:12.04:138,12,0
chr10	18056766	.	AT	A	942.36	PASS	AB=0.963;AC=5;AF=0.089;AN=56;BaseQRankSum=7.877;DP=580;FS=2.810;HRun=9;HaplotypeScore=55.7209;InbreedingCoeff=0.7914;MQ=69.22;MQ0=3;MQRankSum=0.326;QD=12.56;ReadPosRankSum=1.099;VQSLOD=3.1487;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,33:34:86.97:785,87,0	0/0:8,0:8:21.05:0,21,234	0/1:25,1:13:10.27:10,0,222	0/0:13,0:11:27.45:0,27,268	0/0:34,0:34:90.27:0,90,1039	0/0:22,0:22:60.18:0,60,692	0/0:20,0:20:57.17:0,57,657	0/0:38,0:38:96.27:0,96,1091	1/1:4,11:15:30.01:275,30,0	0/0:24,1:25:44.78:0,45,769	0/0:20,1:21:35.72:0,36,665	0/0:12,0:12:30.08:0,30,338	0/0:23,0:23:57.17:0,57,653	0/0:15,0:15:36.11:0,36,415	0/0:24,0:24:66.19:0,66,754	0/0:22,0:22:57.16:0,57,649	0/0:16,0:16:38.70:0,39,425	0/0:8,0:8:21.06:0,21,242	0/0:17,0:16:33.10:0,33,381	0/0:34,0:34:93.27:0,93,1065	0/0:8,0:8:24.04:0,24,263	0/0:14,0:15:38.98:0,39,430	0/0:21,0:21:60.17:0,60,682	0/0:17,0:17:45.12:0,45,510	0/0:15,0:15:42.12:0,42,485	0/0:22,0:22:66.19:0,66,754	0/0:42,0:42:99:0,111,1269	0/0:13,0:13:36.09:0,36,405
chr10	18057467	.	T	TA	526.93	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.692;DP=630;FS=5.078;HRun=1;HaplotypeScore=107.6532;InbreedingCoeff=0.9974;MQ=87.86;MQ0=0;MQRankSum=-5.190;QD=31.00;ReadPosRankSum=-0.428;VQSLOD=3.0842;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,15:17:45.10:622,45,0	0/0:12,0:12:33.11:0,33,428	0/0:25,0:25:75.10:0,75,919	0/0:23,0:23:66.21:0,66,851	0/0:33,0:33:96.29:0,96,1227	0/0:27,0:27:75.23:0,75,958	0/0:18,0:18:51.16:0,51,646	0/0:31,0:31:87.28:0,87,1114	0/0:18,0:18:51.06:0,51,610	0/0:27,0:27:81.26:0,81,1051	0/0:24,0:24:72.22:0,72,919	0/0:22,0:22:54.18:0,54,700	0/0:26,0:26:75.24:0,75,971	0/0:17,0:17:48.16:0,48,622	0/0:15,0:15:42.14:0,42,544	0/0:22,0:22:60.20:0,60,778	0/0:18,0:18:42.99:0,43,580	0/0:14,0:14:39.05:0,39,469	0/0:13,0:13:39.13:0,39,502	0/0:38,0:38:99:0,114,1478	0/0:33,0:33:87.27:0,87,1114	0/0:23,0:23:69.22:0,69,896	0/0:30,0:30:87.27:0,87,1114	0/0:9,0:9:24.08:0,24,311	0/0:17,0:17:51.15:0,51,640	0/0:27,0:27:78.25:0,78,1012	0/0:38,0:38:99:0,114,1476	0/0:13,0:13:39.13:0,39,506
chr10	18057662	.	CCT	C	683.68	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.238;DP=617;FS=2.145;HRun=0;HaplotypeScore=70.7247;InbreedingCoeff=0.9989;MQ=80.47;MQ0=0;MQRankSum=-2.114;QD=35.98;ReadPosRankSum=2.195;VQSLOD=5.8029;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,19:19:46.96:779,47,0	0/0:9,0:9:27.09:0,27,548	0/0:19,0:19:54.14:0,54,1019	0/0:21,0:21:63.17:0,63,1190	0/0:24,0:24:66.21:0,66,1274	0/0:30,0:30:90.31:0,90,1828	0/0:34,0:34:99:0,102,1974	0/0:31,0:31:93.31:0,93,1850	0/0:19,0:19:57.18:0,57,1122	0/0:28,0:28:84.29:0,84,1707	0/0:27,0:27:75.26:0,75,1521	0/0:23,0:23:69.21:0,69,1332	0/0:25,0:25:75.24:0,75,1475	0/0:19,0:19:57.20:0,57,1156	0/0:14,0:14:42.14:0,42,843	0/0:20,0:20:60.20:0,60,1162	0/0:21,0:21:63.22:0,63,1277	0/0:17,0:17:45.15:0,45,906	0/0:16,0:16:48.11:0,48,919	0/0:26,0:26:78.27:0,78,1583	0/0:14,0:14:42.14:0,42,853	0/0:17,0:17:51.18:0,51,1024	0/0:23,0:23:66.23:0,66,1276	0/0:16,0:16:48.15:0,48,938	0/0:17,0:17:51.16:0,51,1000	0/0:31,0:31:93.31:0,93,1847	0/0:27,0:27:81.28:0,81,1614	0/0:30,0:30:90.31:0,90,1826
chr10	18058135	.	A	AT	966.72	PASS	AB=0.931;AC=3;AF=0.054;AN=56;BaseQRankSum=-3.325;DP=633;FS=0.561;HRun=9;HaplotypeScore=85.8385;InbreedingCoeff=0.4789;MQ=69.50;MQ0=3;MQRankSum=0.330;QD=14.22;ReadPosRankSum=-1.071;VQSLOD=3.5670;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,37:41:93.25:1029,93,0	0/0:5,0:5:12:0,12,104	0/0:16,0:12:16.09:0,16,146	0/0:20,0:17:17.66:0,18,197	0/0:33,0:33:80.96:0,81,703	0/0:18,0:18:0.49:0,0,161	0/0:15,0:15:28.26:0,28,154	0/0:24,0:25:52.98:0,53,441	0/0:18,0:18:53.99:0,54,469	0/0:27,0:27:74.96:0,75,648	0/0:21,0:21:38.97:0,39,339	0/0:16,1:17:5.19:0,5,164	0/0:29,0:30:83.02:0,83,709	0/0:13,0:13:38.99:0,39,339	0/0:24,1:25:33.16:0,33,300	0/0:27,0:27:61.57:0,62,337	0/0:22,0:22:59.01:0,59,501	0/0:27,0:27:12.27:0,12,316	0/0:21,0:21:44:0,44,368	0/0:37,0:37:86.63:0,87,740	0/0:9,0:8:17.98:0,18,156	0/0:18,1:20:22.83:0,23,416	0/0:27,0:27:56.95:0,57,495	0/0:16,0:16:47.99:0,48,417	0/1:25,2:27:43.62:44,0,265	0/0:21,0:21:56.99:0,57,495	0/0:33,0:33:92.97:0,93,807	0/0:19,0:20:44.01:0,44,367
chr10	18058699	.	C	CA	843.60	PASS	AB=0.816;AC=16;AF=0.286;AN=56;BaseQRankSum=-3.364;DP=579;FS=4.388;HRun=14;HaplotypeScore=103.1035;InbreedingCoeff=0.2540;MQ=67.98;MQ0=7;MQRankSum=-2.561;QD=3.51;ReadPosRankSum=-1.151;VQSLOD=1.1392;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:85.45:0,85,556	0/0:5,0:5:14.78:0,15,96	0/0:23,0:8:14.29:0,14,85	0/0:20,0:8:0.28:0,0,43	0/1:24,2:30:32.40:32,0,181	1/1:9,17:26:4.20:144,4,0	1/1:5,6:12:8.84:67,9,0	0/0:10,0:30:36.56:0,37,106	0/0:6,0:18:16.25:0,16,47	0/1:22,0:22:13.81:14,0,86	0/0:13,0:13:17.58:0,18,112	1/1:6,11:17:15.80:119,16,0	0/0:25,0:29:21.79:0,22,112	0/1:10,2:12:5.78:6,0,94	0/1:9,16:27:10.56:133,0,11	0/1:9,16:25:8.57:175,0,9	0/0:28,0:31:38.33:0,38,240	0/1:6,5:11:7.69:44,0,8	0/0:6,0:20:28.94:0,29,84	0/0:3,0:16:19.59:0,20,56	0/0:7,0:19:24.40:0,24,70	0/0:12,1:14:2.30:0,2,132	0/0:18,1:19:11.40:0,11,192	0/1:21,0:21:26.22:26,0,108	1/1:8,17:27:16.41:246,16,0	0/0:23,0:27:54.40:0,54,316	0/0:21,0:21:22.33:0,22,140	0/1:8,2:9:5.63:6,0,95
chr10	18058821	.	CA	C	317.80	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.795;DP=585;FS=0.000;HRun=2;HaplotypeScore=87.2752;InbreedingCoeff=0.9859;MQ=73.66;MQ0=1;MQRankSum=-2.181;QD=22.70;ReadPosRankSum=-1.608;VQSLOD=3.0017;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,11:14:33.09:412,33,0	0/0:10,0:10:27.06:0,27,382	0/0:14,0:14:35.94:0,36,509	0/0:6,0:6:16.61:0,17,223	0/0:32,0:32:96.33:0,96,1438	0/0:22,0:22:60.12:0,60,849	0/0:18,0:18:48.16:0,48,719	0/0:44,0:43:99:0,126,1834	0/0:18,0:18:51.17:0,51,764	0/0:21,0:21:63.21:0,63,942	0/0:37,0:37:99:0,111,1644	0/0:18,0:18:48.13:0,48,676	0/0:25,0:25:69.23:0,69,1034	0/0:17,0:17:48.15:0,48,697	0/0:28,0:28:78.26:0,78,1166	0/0:28,0:28:78.24:0,78,1131	0/0:12,0:11:30.10:0,30,448	0/0:14,0:14:42.14:0,42,629	0/0:19,0:19:57.19:0,57,855	0/0:33,0:33:96.32:0,96,1418	0/0:12,0:12:36.12:0,36,538	0/0:19,0:19:54.17:0,54,789	0/0:24,0:24:66.22:0,66,987	0/0:13,0:13:39.13:0,39,584	0/0:9,0:9:27.09:0,27,405	0/0:23,0:23:69.22:0,69,1013	0/0:30,0:30:84.27:0,84,1238	0/0:25,0:25:75.25:0,75,1121
chr10	18058880	.	TAC	T	21117.31	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-5.195;DP=525;FS=0.000;HRun=0;HaplotypeScore=71.1252;InbreedingCoeff=0.9121;MQ=72.79;MQ0=2;MQRankSum=-5.669;QD=41.57;ReadPosRankSum=4.748;VQSLOD=6.5000;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,12:12:33.11:535,33,0	1/1:0,4:4:12.04:195,12,0	0/0:9,0:9:6.23:0,6,184	0/0:8,0:8:13.56:0,14,106	1/1:0,24:24:66.23:1073,66,0	1/1:0,25:25:63.21:1011,63,0	1/1:0,12:12:27.09:439,27,0	1/1:0,32:32:93.25:1386,93,0	1/1:0,10:10:30.10:488,30,0	1/1:0,22:22:63.16:952,63,0	1/1:0,33:32:78.27:1269,78,0	1/1:0,29:29:75.26:1220,75,0	1/1:0,27:27:75.26:1215,75,0	1/1:0,17:17:48.16:780,48,0	1/1:0,29:29:66.23:1072,66,0	1/1:0,24:24:57.19:927,57,0	1/1:0,12:11:21.07:341,21,0	1/1:0,14:14:36.12:586,36,0	1/1:0,22:22:66.17:968,66,0	1/1:0,32:32:84.29:1365,84,0	1/1:0,9:9:21.07:342,21,0	1/1:0,14:14:39.13:635,39,0	1/1:0,26:26:63.22:1023,63,0	1/1:0,10:10:27.09:439,27,0	1/1:0,15:15:42.14:684,42,0	1/1:0,18:18:50.94:707,51,0	1/1:0,19:19:48.16:781,48,0	1/1:0,17:17:42.14:683,42,0
chr10	18059327	.	T	TA	25250.48	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-0.314;DP=643;FS=1.301;HRun=0;HaplotypeScore=104.6446;InbreedingCoeff=0.9913;MQ=84.23;MQ0=0;MQRankSum=-10.446;QD=41.94;ReadPosRankSum=6.032;VQSLOD=4.5235;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,16:16:42.14:621,42,0	1/1:0,7:7:18.06:269,18,0	0/0:21,0:21:59.92:0,60,775	0/0:20,0:20:57.13:0,57,716	1/1:1,35:36:99:1508,102,0	1/1:0,25:25:75.25:1123,75,0	1/1:0,18:18:51.17:764,51,0	1/1:1,38:39:99:1619,114,0	1/1:0,24:24:63.21:944,63,0	1/1:0,31:31:93.31:1394,93,0	1/1:1,20:21:60.15:898,60,0	1/1:0,28:28:81.27:1209,81,0	1/1:1,38:39:99:1620,108,0	1/1:0,18:18:54.18:810,54,0	1/1:0,39:39:93.31:1392,93,0	1/1:0,29:29:84.28:1261,84,0	1/1:1,16:17:48.16:720,48,0	1/1:1,6:6:18.06:266,18,0	1/1:0,11:11:33.08:471,33,0	1/1:0,37:37:99:1524,102,0	1/1:0,19:19:51.17:765,51,0	1/1:0,18:18:51.17:765,51,0	1/1:0,22:22:62.99:943,63,0	1/1:0,12:12:30.10:452,30,0	1/1:0,17:17:48.16:721,48,0	1/1:0,29:29:87.29:1305,87,0	1/1:0,28:28:81.27:1214,81,0	1/1:0,15:15:45.15:674,45,0
chr10	18059737	.	GT	G	20919.55	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-2.751;DP=623;FS=0.000;HRun=2;HaplotypeScore=63.4047;InbreedingCoeff=0.9595;MQ=74.16;MQ0=0;MQRankSum=-6.219;QD=34.81;ReadPosRankSum=4.519;VQSLOD=5.0215;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,11:11:27.09:350,27,0	1/1:0,8:8:24.08:312,24,0	0/0:14,0:13:35.13:0,35,471	0/0:8,0:7:11.98:0,12,107	1/1:0,28:28:78.25:1013,78,0	1/1:0,24:24:60.19:776,60,0	1/1:1,18:19:45.15:584,45,0	1/1:0,36:36:99:1387,108,0	1/1:0,24:24:63.20:818,63,0	1/1:0,27:27:81.25:1035,81,0	1/1:0,20:20:57.18:734,57,0	1/1:0,35:35:90.29:1169,90,0	1/1:0,31:31:81.26:1052,81,0	1/1:0,21:21:57.19:740,57,0	1/1:0,28:28:78.25:1013,78,0	1/1:0,23:23:63.20:818,63,0	1/1:2,14:16:10.64:511,11,0	1/1:0,12:12:36.12:467,36,0	1/1:0,16:16:48.14:608,48,0	1/1:2,40:42:99:1394,108,0	1/1:0,22:22:63.20:818,63,0	1/1:0,25:25:69.22:896,69,0	1/1:0,28:28:69.22:896,69,0	1/1:0,12:12:27.09:351,27,0	1/1:2,17:19:48.16:623,48,0	1/1:0,33:33:99:1271,99,0	1/1:1,29:30:75.20:974,75,0	1/1:0,11:11:24.08:312,24,0
chr10	18060495	.	ACAAT	A	604.32	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.860;DP=669;FS=0.000;HRun=0;HaplotypeScore=106.3268;InbreedingCoeff=0.9698;MQ=76.74;MQ0=0;MQRankSum=-1.569;QD=33.57;ReadPosRankSum=1.509;VQSLOD=3.5651;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,17:18:39.05:699,39,0	0/0:15,0:15:45.13:0,45,1051	0/0:16,0:16:48.13:0,48,1110	0/0:22,0:22:50.89:0,51,1253	0/0:30,0:30:87.26:0,87,2186	0/0:32,0:31:93.22:0,93,2292	0/0:15,0:15:39.11:0,39,857	0/0:32,0:32:93.28:0,93,2237	0/0:22,0:22:66.18:0,66,1607	0/0:38,0:38:99:0,114,2908	0/0:24,0:24:69.22:0,69,1789	0/0:30,0:30:87.26:0,87,2083	0/0:17,0:17:45.08:0,45,1075	0/0:25,0:25:75.23:0,75,1906	0/0:41,0:41:97.19:0,97,2719	0/0:25,0:25:75.25:0,75,1931	0/0:26,0:26:75.24:0,75,1912	0/0:4,0:4:12.01:0,12,263	0/0:18,0:18:54.15:0,54,1278	0/0:26,0:26:75.22:0,75,1717	0/0:21,0:21:60.18:0,60,1542	0/0:23,0:23:69.22:0,69,1750	0/0:19,0:19:54.11:0,54,1235	0/0:34,0:34:93.27:0,93,2299	0/0:17,0:17:51.15:0,51,1199	0/0:36,0:36:99:0,108,2850	0/0:30,0:30:80.87:0,81,2108	0/0:13,0:13:36.12:0,36,968
chr10	18060962	.	AT	A	248.32	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.283;DP=548;FS=0.000;HRun=2;HaplotypeScore=51.2676;InbreedingCoeff=0.9783;MQ=85.85;MQ0=0;MQRankSum=-0.994;QD=22.57;ReadPosRankSum=-0.327;VQSLOD=3.1458;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,10:11:22.65:341,23,0	0/0:12,0:12:33.11:0,33,494	0/0:20,0:21:58.51:0,59,839	0/0:16,0:16:45.03:0,45,625	0/0:23,0:23:69.22:0,69,1012	0/0:17,0:17:48.15:0,48,698	0/0:16,0:16:48.10:0,48,672	0/0:34,0:34:99:0,99,1466	0/0:20,0:20:60.19:0,60,878	0/0:23,0:23:69.23:0,69,1015	0/0:21,0:21:63.21:0,63,944	0/0:23,0:23:69.20:0,69,993	0/0:17,0:17:51.16:0,51,743	0/0:18,0:18:51.15:0,51,740	0/0:20,0:20:60.19:0,60,879	0/0:19,0:19:57.18:0,57,836	0/0:18,0:18:51.15:0,51,741	0/0:9,0:9:24.08:0,24,349	0/0:13,0:13:39.12:0,39,564	0/0:32,0:32:96.30:0,96,1398	0/0:10,0:10:27.04:0,27,360	0/0:27,0:27:78.24:0,78,1131	0/0:27,0:27:81.27:0,81,1208	0/0:5,0:5:15.05:0,15,225	0/0:20,0:20:60.18:0,60,877	0/0:26,1:27:39.28:0,39,1037	0/0:30,0:30:90.29:0,90,1329	0/0:19,0:19:57.18:0,57,835
chr10	18061550	.	G	GC	959.11	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=8.473;DP=681;FS=1.614;HRun=0;HaplotypeScore=67.4803;InbreedingCoeff=0.9979;MQ=86.65;MQ0=0;MQRankSum=-2.883;QD=33.07;ReadPosRankSum=2.266;VQSLOD=3.3998;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,27:29:78.73:1054,79,0	0/0:9,0:9:27.09:0,27,376	0/0:21,0:21:53.07:0,53,673	0/0:24,0:24:60.16:0,60,805	0/0:26,0:26:78.25:0,78,1073	0/0:19,0:18:57.19:0,57,795	0/0:16,0:16:48.16:0,48,671	0/0:27,0:27:81.26:0,81,1118	0/0:19,0:19:54.18:0,54,755	0/0:44,0:44:99:0,132,1818	0/0:23,0:23:69.23:0,69,965	0/0:32,0:32:96.32:0,96,1342	0/0:14,0:14:39.13:0,39,545	0/0:15,0:15:45.03:0,45,587	0/0:34,0:34:93.31:0,93,1300	0/0:28,0:28:81.26:0,81,1115	0/0:27,0:27:81.25:0,81,1114	0/0:19,0:19:57.19:0,57,795	0/0:17,0:17:51.17:0,51,700	0/0:35,0:35:99:0,102,1408	0/0:26,0:26:75.25:0,75,1047	0/0:34,0:34:99:0,99,1382	0/0:21,0:21:63.16:0,63,841	0/0:18,0:18:54.17:0,54,739	0/0:31,0:31:93.30:0,93,1283	0/0:43,0:42:99:0,123,1703	0/0:21,0:21:63.20:0,63,863	0/0:9,0:9:27.09:0,27,378
chr10	18062514	.	GC	G	309.02	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.102;DP=370;FS=2.264;HRun=8;HaplotypeScore=37.9117;InbreedingCoeff=0.5407;MQ=73.31;MQ0=0;MQRankSum=0.329;QD=22.07;ReadPosRankSum=0.649;VQSLOD=3.3270;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:72.17:0,72,841	0/0:1,0:1:3.01:0,3,36	0/0:6,0:5:9.03:0,9,109	0/0:7,0:7:3:0,3,133	0/0:4,0:4:12.04:0,12,145	0/0:8,0:8:18.05:0,18,206	0/0:32,0:32:93.27:0,93,1112	0/0:10,0:10:24.05:0,24,267	1/1:0,14:14:42.06:403,42,0	0/0:10,0:10:30.08:0,30,353	0/0:4,0:4:12.03:0,12,134	0/0:22,0:22:51.15:0,51,606	0/0:11,0:11:33.09:0,33,384	0/0:7,0:8:24.06:0,24,275	0/0:7,0:7:21.06:0,21,254	0/0:7,0:7:18.06:0,18,217	0/0:21,0:21:57.14:0,57,654	0/0:29,0:29:87.27:0,87,1051	0/0:15,0:15:36.08:0,36,410	0/0:2,0:2:3.01:0,3,36	0/0:42,0:42:99:0,123,1461	0/0:2,0:4:8.89:0,9,87	0/0:3,0:3:9.03:0,9,108	0/0:29,0:29:81.24:0,81,966	0/0:11,0:11:30.09:0,30,362	0/0:14,0:14:36.09:0,36,415	0/0:14,0:12:42.11:0,42,486	0/0:10,0:10:21.05:0,21,240
chr10	18064359	.	C	CAA	6734.09	PASS	AB=1.000;AC=49;AF=0.875;AN=56;BaseQRankSum=5.980;DP=457;FS=9.972;HRun=11;HaplotypeScore=150.5776;InbreedingCoeff=0.2660;MQ=38.05;MQ0=11;MQRankSum=-1.126;QD=14.96;ReadPosRankSum=0.251;VQSLOD=1.9197;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:13,0:13:13.90:72,0,14	1/1:6,0:6:11.99:99,12,0	0/0:7,0:6:5.83:0,6,54	0/1:6,0:4:0.03:0,0,7	1/1:43,0:42:58.33:607,58,0	1/1:16,4:23:38.83:396,39,0	1/1:6,3:8:14.07:151,14,0	1/1:18,0:13:30.03:280,30,0	1/1:8,4:12:32.61:351,33,0	1/1:15,0:16:10.28:223,10,0	0/1:37,0:38:2.76:444,0,3	1/1:12,6:16:21.06:251,21,0	1/1:13,0:14:14.47:165,14,0	1/1:18,0:18:29.59:221,30,0	1/1:7,6:14:27.04:318,27,0	1/1:9,3:12:15.97:182,16,0	1/1:26,0:25:11.49:329,11,0	1/1:11,5:14:28.87:329,29,0	1/1:18,0:15:39.03:365,39,0	1/1:11,0:11:24.04:238,24,0	1/1:6,0:5:11.81:98,12,0	0/1:7,0:7:24.52:33,0,25	1/1:8,0:8:14.98:124,15,0	0/1:8,0:9:5.39:45,0,5	1/1:18,9:29:56.58:567,57,0	1/1:17,0:17:20.48:236,20,0	1/1:26,0:27:36.37:415,36,0	1/1:8,0:8:23.95:194,24,0
chr10	18064366	.	A	AAAAT	16135.43	PASS	AB=1.000;AC=53;AF=0.946;AN=56;BaseQRankSum=0.639;DP=443;FS=18.089;HRun=0;HaplotypeScore=134.8931;InbreedingCoeff=0.6890;MQ=40.34;MQ0=9;MQRankSum=-1.268;QD=37.01;ReadPosRankSum=2.678;VQSLOD=3.9468;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,5:17:46.93:640,47,0	1/1:1,4:5:11.88:288,12,0	0/0:7,0:6:15.02:0,15,172	0/1:7,0:5:3.92:4,0,56	1/1:14,25:38:95.50:1895,96,0	1/1:20,0:19:23.11:388,23,0	1/1:6,0:6:14.97:209,15,0	1/1:10,0:19:48.65:580,49,0	1/1:15,0:14:22.55:319,23,0	1/1:5,10:15:41.76:834,42,0	1/1:17,19:36:98.69:1749,99,0	1/1:12,0:10:16.27:240,16,0	1/1:5,6:11:30.07:560,30,0	1/1:7,8:14:24.74:619,25,0	1/1:13,0:13:26:335,26,0	1/1:8,0:8:13.93:179,14,0	1/1:12,15:26:68.82:1256,69,0	1/1:15,1:14:15.62:364,16,0	1/1:8,0:20:56.74:816,57,0	1/1:5,0:14:37.88:417,38,0	1/1:0,0:4:12.04:181,12,0	1/1:5,1:6:17.95:235,18,0	1/1:4,4:8:20.63:386,21,0	1/1:5,5:10:20.64:255,21,0	1/1:30,0:29:43.23:612,43,0	1/1:10,9:18:47.93:857,48,0	1/1:9,15:24:71.80:1321,72,0	1/1:1,8:9:27.07:598,27,0
chr10	18064369	.	AAT	A	1112.92	PASS	AB=0.963;AC=29;AF=0.518;AN=56;BaseQRankSum=-4.432;DP=452;FS=2.319;HRun=0;HaplotypeScore=170.6068;InbreedingCoeff=-0.1852;MQ=43.46;MQ0=7;MQRankSum=-0.187;QD=2.87;ReadPosRankSum=-2.815;VQSLOD=1.9209;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:18,0:18:26.71:83,0,27	1/1:5,0:5:8.48:34,8,0	0/0:8,0:7:20.90:0,21,238	0/0:8,0:6:14.83:0,15,148	0/1:39,0:38:17.73:94,0,18	1/1:16,5:20:0.75:114,1,0	0/1:7,0:6:7.10:7,0,32	1/1:27,0:22:6.66:148,7,0	1/1:11,4:14:14.69:167,15,0	0/0:16,0:16:3.56:0,4,23	0/1:36,0:36:29.71:30,0,81	0/1:8,1:8:14.27:28,0,14	0/0:11,0:11:6.30:0,6,24	0/0:15,0:14:2.16:0,2,25	0/1:10,3:13:20.57:21,0,23	0/1:7,1:8:17.60:42,0,18	0/1:27,0:26:33.63:34,0,37	0/1:15,1:14:23.83:38,0,24	0/1:22,0:19:48.56:51,0,49	1/1:16,0:16:7.71:95,8,0	1/1:6,0:5:11.33:83,11,0	0/0:6,0:6:14.26:0,14,56	0/1:8,0:8:11.37:14,0,11	0/1:11,0:11:11.55:12,0,15	0/1:26,3:28:31.98:87,0,32	0/1:20,0:19:7.68:50,0,8	0/1:25,0:25:25.30:25,0,50	1/1:10,0:10:5.29:24,5,0
chr10	18064370	.	AT	A	3952.94	PASS	AB=1.000;AC=51;AF=0.911;AN=56;BaseQRankSum=4.724;DP=449;FS=9.034;HRun=1;HaplotypeScore=158.2294;InbreedingCoeff=0.7492;MQ=43.96;MQ0=7;MQRankSum=-3.296;QD=9.13;ReadPosRankSum=3.757;VQSLOD=0.9579;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:19:32.22:188,32,0	1/1:5,0:5:14.03:68,14,0	0/0:8,0:7:20.90:0,21,206	0/0:8,0:6:13.41:0,13,121	1/1:39,1:39:89.90:428,90,0	1/1:19,1:19:35.23:184,35,0	0/1:7,0:6:0.21:37,0,0	1/1:28,0:23:55.96:280,56,0	1/1:11,4:14:36.46:188,36,0	1/1:17,0:17:37.15:150,37,0	1/1:35,1:36:61.38:322,61,0	1/1:8,0:7:14.19:64,14,0	1/1:11,0:11:20.83:85,21,0	1/1:14,0:13:24.42:103,24,0	1/1:13,0:13:18.89:84,19,0	1/1:7,0:7:11.85:64,12,0	1/1:27,1:27:49.65:239,50,0	1/1:16,0:14:21.32:101,21,0	1/1:23,0:20:43.25:196,43,0	1/1:16,0:16:33.74:173,34,0	1/1:6,0:5:13.57:94,14,0	1/1:6,0:6:2.68:9,3,0	1/1:8,0:8:13.51:70,14,0	1/1:9,1:10:13.98:58,14,0	1/1:24,2:25:39.37:243,39,0	1/1:19,0:18:41.86:197,42,0	1/1:24,1:25:44.25:216,44,0	1/1:8,2:10:24.91:114,25,0
chr10	18064371	.	T	TA	12666.15	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=1.947;DP=463;FS=19.972;HRun=11;HaplotypeScore=129.1271;InbreedingCoeff=0.9119;MQ=45.96;MQ0=7;MQRankSum=-3.894;QD=28.40;ReadPosRankSum=3.323;VQSLOD=4.0688;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,6:19:46.96:477,47,0	1/1:1,4:5:15.05:203,15,0	0/0:8,0:7:21.06:0,21,246	0/0:9,0:7:11.98:0,12,166	1/1:13,28:40:99:1374,111,0	1/1:7,1:20:29.87:309,30,0	1/1:3,0:6:9.43:172,9,0	1/1:5,18:26:66.20:856,66,0	1/1:8,1:14:25.21:315,25,0	1/1:3,10:17:41.72:546,42,0	1/1:15,21:36:99:1153,100,0	1/1:2,1:8:19.29:212,19,0	1/1:4,8:12:26.82:330,27,0	1/1:3,12:14:33.11:429,33,0	1/1:3,4:13:26.46:332,26,0	1/1:2,2:7:16.39:199,16,0	1/1:8,20:27:74.22:892,74,0	1/1:4,8:15:20.85:366,21,0	1/1:2,9:20:57.19:743,57,0	1/1:2,11:18:42.09:505,42,0	1/1:1,1:5:15.05:187,15,0	1/1:5,2:7:17.16:130,17,0	1/1:0,8:8:21.07:271,21,0	1/1:5,5:10:14.72:167,15,0	1/1:6,9:26:45:580,45,0	1/1:3,16:18:53.87:686,54,0	1/1:7,17:25:71.53:867,72,0	1/1:2,8:10:27.09:364,27,0
chr10	18065100	.	C	CA	4846.29	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-0.868;DP=459;FS=21.364;HRun=7;HaplotypeScore=51.0181;InbreedingCoeff=0.9575;MQ=54.79;MQ0=0;MQRankSum=3.208;QD=28.68;ReadPosRankSum=3.511;VQSLOD=3.1580;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:38:43.18:0,43,135	1/1:0,6:6:18.06:217,18,0	0/0:10,0:10:5.05:0,5,115	0/0:5,0:5:12.01:0,12,110	1/1:4,18:22:51.16:616,51,0	0/0:20,0:20:45.07:0,45,434	0/0:18,0:18:45.07:0,45,434	0/0:47,0:47:99:0,126,1216	0/0:13,0:13:33.05:0,33,319	1/1:2,11:13:33.10:398,33,0	1/1:2,12:14:36.11:435,36,0	0/0:17,0:17:42.06:0,42,405	1/1:2,10:12:24.07:290,24,0	1/1:1,10:11:21.06:253,21,0	0/0:10,0:10:15.02:0,15,145	0/0:17,0:16:30.05:0,30,289	1/1:4,21:24:51.16:612,51,0	0/0:25,0:24:51.08:0,51,492	0/0:19,0:19:54.09:0,54,522	0/0:13,0:13:39.06:0,39,377	0/0:16,0:16:42.06:0,42,405	1/1:1,2:3:6.02:72,6,0	1/1:2,6:8:15.05:181,15,0	1/1:0,11:11:30.09:362,30,0	0/0:19,0:19:57.09:0,57,550	1/1:0,18:18:54.17:652,54,0	1/1:3,15:18:39.12:467,39,0	1/1:0,8:8:24.07:290,24,0
chr10	18067133	.	T	TAAAC	15993.31	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-15.224;DP=773;FS=1.890;HRun=0;HaplotypeScore=114.9568;InbreedingCoeff=0.9985;MQ=63.58;MQ0=2;MQRankSum=-3.431;QD=45.83;ReadPosRankSum=0.557;VQSLOD=5.5875;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:80.60:0,81,1219	1/1:3,10:13:27.09:652,27,0	0/0:22,0:18:18.06:0,18,276	0/0:23,0:20:35.48:0,35,514	1/1:13,24:37:66.23:1594,66,0	0/0:20,0:20:51.17:0,51,824	0/0:24,0:24:54.17:0,54,832	0/0:35,0:35:45.13:0,45,652	0/0:29,0:29:60.20:0,60,968	1/1:11,17:28:54.18:1267,54,0	1/1:9,12:22:36.12:853,36,0	0/0:43,0:43:84.27:0,84,1326	1/1:13,20:34:69.24:1613,69,0	1/1:4,12:16:33.11:797,33,0	0/0:33,0:33:84.27:0,84,1334	0/0:29,0:29:57.18:0,57,897	1/1:9,20:30:60.21:1443,60,0	0/0:22,0:22:39.13:0,39,630	0/0:18,0:17:27.08:0,27,414	0/0:27,0:27:57.19:0,57,921	0/0:40,0:40:86.09:0,86,1322	1/1:15,15:31:45.15:1086,45,0	1/1:5,23:29:63.21:1467,63,0	1/1:6,21:27:60.21:1450,60,0	0/0:18,0:18:36.12:0,36,582	1/1:11,18:28:54.66:1292,55,0	1/1:10,15:26:51.18:1188,51,0	1/1:3,21:26:54.19:1292,54,0
chr10	18068073	.	T	TTATA	841.68	PASS	AB=0.857;AC=12;AF=0.600;AN=20;BaseQRankSum=-3.237;DP=108;FS=1.850;HRun=0;HaplotypeScore=22.3889;InbreedingCoeff=0.3187;MQ=90.29;MQ0=4;MQRankSum=-0.636;QD=15.30;ReadPosRankSum=1.134;VQSLOD=2.8745;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,0:3:2.74:12,3,0	./.	0/1:8,0:7:0:0,0,0	0/0:19,0:8:1.83:0,2,12	./.	./.	./.	1/1:0,0:8:14.37:102,14,0	0/0:3,0:6:9.01:0,9,84	./.	./.	./.	./.	./.	./.	./.	1/1:3,9:11:18.06:438,18,0	0/0:3,0:4:0.89:0,1,2	./.	./.	./.	./.	./.	1/1:2,1:3:3.01:73,3,0	./.	./.	1/1:3,1:4:3.01:73,3,0	0/1:9,5:15:53.16:234,0,53
chr10	18068512	.	C	CT	679.69	PASS	AB=1.000;AC=6;AF=0.107;AN=56;BaseQRankSum=10.482;DP=559;FS=5.198;HRun=4;HaplotypeScore=62.2256;InbreedingCoeff=0.3753;MQ=62.31;MQ0=0;MQRankSum=-1.366;QD=7.39;ReadPosRankSum=-1.130;VQSLOD=-0.2997;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,120,1331	0/0:7,0:7:15.01:0,15,151	0/0:7,0:5:5.85:0,6,48	0/0:13,0:12:16.42:0,16,146	0/0:32,0:32:90.21:0,90,980	0/0:25,0:25:72.18:0,72,798	0/0:22,0:22:66.16:0,66,730	0/1:35,0:35:10.07:208,0,10	1/1:0,13:13:26.96:368,27,0	0/0:23,0:23:63.09:0,63,691	0/0:12,0:12:33.09:0,33,367	0/0:26,0:26:75.17:0,75,821	0/0:13,0:13:39.07:0,39,411	0/0:18,0:18:51.13:0,51,568	0/0:21,0:21:63.13:0,63,674	0/0:21,1:22:22.15:0,22,629	0/0:31,0:31:90.18:0,90,979	0/0:26,0:27:56.77:0,57,715	0/1:16,0:16:31.28:89,0,31	0/1:19,0:19:1.87:112,0,2	0/1:8,0:8:12.60:32,0,13	0/0:10,0:10:30.05:0,30,316	0/0:20,0:20:54.14:0,54,602	0/0:13,0:13:36.06:0,36,394	0/0:14,0:14:39.07:0,39,428	0/0:31,0:31:87.21:0,87,953	0/0:15,0:15:42.09:0,42,457	0/0:20,0:20:60.17:0,60,680
chr10	18068516	.	T	TA	2192.52	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=-7.187;DP=554;FS=1.521;HRun=7;HaplotypeScore=56.7853;InbreedingCoeff=0.9223;MQ=63.38;MQ0=0;MQRankSum=0.169;QD=22.84;ReadPosRankSum=-2.437;VQSLOD=2.7104;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,123,1150	0/0:7,0:7:14.96:0,15,132	0/1:6,0:5:0.81:1,0,24	0/0:10,0:9:16.29:0,16,144	0/0:30,0:30:75.12:0,75,724	0/0:25,0:25:66.09:0,66,631	0/0:23,0:23:63.08:0,63,600	1/1:5,28:33:81.25:976,81,0	1/1:12,0:11:26.25:159,26,0	0/0:22,0:22:60.08:0,60,572	0/0:12,0:12:30.05:0,30,289	0/0:26,0:26:66.11:0,66,637	0/0:13,0:13:30.05:0,30,289	0/0:19,0:19:48.07:0,48,463	0/0:22,0:22:51.06:0,51,488	0/0:22,0:22:49.96:0,50,588	0/0:32,0:32:83.85:0,84,779	0/0:26,0:26:65.84:0,66,620	1/1:2,16:18:45.12:521,45,0	1/1:2,17:19:48.09:563,48,0	1/1:1,7:8:12.04:145,12,0	0/0:12,0:12:27.02:0,27,252	0/0:20,0:20:54.08:0,54,517	0/0:13,0:13:36.04:0,36,341	0/0:15,0:15:42.04:0,42,393	0/0:29,0:29:78.12:0,78,753	0/0:15,0:15:42.05:0,42,400	0/0:20,0:20:60.10:0,60,579
chr10	18069091	.	ACTT	A	2715.40	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=10.423;DP=657;FS=4.609;HRun=0;HaplotypeScore=92.5341;InbreedingCoeff=0.9429;MQ=76.78;MQ0=0;MQRankSum=-3.475;QD=32.72;ReadPosRankSum=-2.119;VQSLOD=3.5177;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,102,2229	0/0:5,0:5:12.04:0,12,262	0/0:14,0:14:36.11:0,36,735	0/0:23,0:23:51.17:0,51,1062	0/0:25,0:25:72.01:0,72,1558	0/0:21,0:21:60.21:0,60,1312	0/0:29,0:29:75.26:0,75,1640	1/1:3,19:22:57.12:831,57,0	0/0:23,0:23:66.23:0,66,1444	0/0:34,0:34:90.31:0,90,1967	0/0:16,0:16:48.16:0,48,1049	0/0:28,0:28:81.28:0,81,1771	0/0:29,0:29:79.51:0,80,1669	0/0:26,0:26:78.27:0,78,1704	0/0:30,0:30:81.28:0,81,1754	0/0:30,0:30:78.27:0,78,1687	0/0:30,0:30:81.25:0,81,1728	0/0:10,0:10:18.06:0,18,392	1/1:7,15:22:45.15:714,45,0	1/1:1,13:14:39.13:618,39,0	1/1:3,22:25:45.15:713,45,0	0/0:19,0:19:51.18:0,51,1115	0/0:24,0:24:72.23:0,72,1533	0/0:33,0:33:96.33:0,96,2099	0/0:21,0:21:54.10:0,54,1089	0/0:29,0:29:84.29:0,84,1837	0/0:32,0:31:90.31:0,90,1964	0/0:4,0:4:3.01:0,3,66
chr10	18069399	.	AAG	A	2200.20	PASS	AB=0.950;AC=31;AF=0.554;AN=56;BaseQRankSum=7.176;DP=391;FS=32.055;HRun=0;HaplotypeScore=80.3605;InbreedingCoeff=-0.0061;MQ=52.37;MQ0=12;MQRankSum=-1.100;QD=7.33;ReadPosRankSum=0.104;VQSLOD=1.0802;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:14,0:14:19.58:20,0,282	1/1:10,0:9:19.88:88,20,0	0/0:19,0:10:27.52:0,28,332	0/0:18,0:7:18.06:0,18,221	0/1:18,1:19:4.70:109,0,5	0/1:9,3:12:98.94:99,0,162	0/0:10,0:8:7.15:0,7,118	0/0:15,0:15:40.89:0,41,436	0/0:11,0:10:26.57:0,27,312	0/1:19,1:19:99:220,0,101	1/1:19,1:20:45.17:216,45,0	0/1:10,0:10:25.82:26,0,209	1/1:6,0:5:8.10:49,8,0	1/1:9,0:9:23.11:170,23,0	0/1:12,0:12:47.43:47,0,313	0/1:12,1:11:91.82:112,0,92	1/1:16,0:16:17.85:151,18,0	0/1:12,2:14:26.10:26,0,293	0/1:8,0:7:39.26:39,0,170	0/1:25,0:24:58.73:59,0,463	0/1:9,0:8:13.46:13,0,180	0/1:12,1:13:39.78:187,0,40	1/1:19,0:17:19.37:163,19,0	1/1:10,0:8:4.90:27,5,0	0/0:18,0:17:1.12:0,1,423	1/1:17,4:20:11.02:240,11,0	0/1:10,1:11:33.79:100,0,34	1/1:9,0:9:9.46:220,9,0
chr10	18069401	.	G	GA	3131.60	PASS	AB=0.855;AC=33;AF=0.589;AN=56;BaseQRankSum=8.596;DP=445;FS=28.613;HRun=2;HaplotypeScore=105.9436;InbreedingCoeff=0.0082;MQ=49.59;MQ0=14;MQRankSum=-2.171;QD=8.51;ReadPosRankSum=-1.659;VQSLOD=-0.5581;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:16,0:16:34.98:35,0,253	1/1:12,2:13:24.85:112,25,0	0/0:19,0:10:27.05:0,27,331	0/0:18,0:7:18.06:0,18,221	1/1:18,3:21:15.32:179,15,0	0/1:10,1:13:99:127,0,162	0/0:9,1:8:7.22:0,7,115	0/0:18,0:17:32.42:0,32,427	0/0:11,0:11:26.41:0,26,315	0/1:27,0:24:58.58:273,0,59	1/1:20,1:23:57.12:280,57,0	0/1:9,3:12:90.89:91,0,206	1/1:7,1:7:13.58:101,14,0	1/1:4,5:9:23.33:235,23,0	0/1:11,4:15:87.59:88,0,311	0/1:8,6:12:64.65:218,0,65	1/1:17,0:17:30.49:167,30,0	0/1:14,0:14:41.23:41,0,294	0/1:6,2:7:45.28:45,0,170	0/1:21,7:27:99:131,0,444	0/1:8,3:9:21.76:22,0,172	0/1:14,2:16:28.67:237,0,29	1/1:17,4:18:25.13:228,25,0	1/1:9,1:8:4.90:27,5,0	0/1:20,3:22:15.18:15,0,390	1/1:23,0:23:19.71:287,20,0	0/1:7,4:11:20.25:110,0,20	1/1:7,6:13:22.21:268,22,0
chr10	18070079	.	AACACACACACACACACAC	A	11252.53	PASS	AB=0.728;AC=41;AF=0.732;AN=56;BaseQRankSum=5.307;DP=436;FS=0.630;HRun=0;HaplotypeScore=211.4165;InbreedingCoeff=0.6462;MQ=55.09;MQ0=10;MQRankSum=-5.251;QD=36.77;ReadPosRankSum=2.797;VQSLOD=3.9274;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:39:66.21:0,66,3154	1/1:3,5:8:9.03:438,9,0	0/0:20,0:11:3.01:0,3,62	0/0:14,0:8:6.01:0,6,93	1/1:8,10:18:18.02:475,18,0	1/1:7,0:12:15.05:413,15,0	1/1:10,0:21:6:74,6,0	0/0:23,0:22:26.24:0,26,457	0/0:8,0:13:15.05:0,15,562	1/1:4,6:10:5.14:424,5,0	1/1:5,5:10:9.03:438,9,0	1/1:5,0:16:20.69:650,21,0	1/1:7,2:10:15.03:370,15,0	1/1:10,3:14:15.05:386,15,0	1/1:9,0:14:20.94:436,21,0	1/1:6,0:21:19.29:724,19,0	1/1:8,7:15:15.05:730,15,0	1/1:6,0:11:12.04:503,12,0	0/1:6,0:7:0.51:1,0,46	0/1:4,0:10:3.06:50,0,3	0/0:19,0:18:14.86:0,15,477	1/1:3,9:13:25.64:833,26,0	1/1:5,3:8:9.03:287,9,0	0/1:13,6:18:97.14:280,0,97	1/1:1,0:11:16.61:404,17,0	1/1:15,8:24:45.04:1419,45,0	1/1:11,7:20:24.68:1255,25,0	1/1:2,7:10:6.34:663,6,0
chr10	18070157	.	AT	A	2896.98	PASS	AB=0.586;AC=31;AF=0.554;AN=56;BaseQRankSum=-1.950;DP=388;FS=1.097;HRun=9;HaplotypeScore=118.6107;InbreedingCoeff=0.7885;MQ=43.77;MQ0=4;MQRankSum=-2.229;QD=13.60;ReadPosRankSum=0.991;VQSLOD=3.2216;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,1:22:20.97:0,21,465	1/1:3,5:8:9.47:83,9,0	0/0:10,0:3:5.96:0,6,54	0/0:10,0:2:3.01:0,3,35	1/1:5,7:11:2.88:27,3,0	0/0:23,0:22:41.97:0,42,427	0/0:14,0:13:11.99:0,12,123	1/1:7,34:40:92.99:841,93,0	0/0:9,0:8:9.03:0,9,104	1/1:4,8:12:27.01:247,27,0	1/1:5,11:15:23.70:219,24,0	0/0:17,0:17:29.20:0,29,270	1/1:1,5:6:14.81:137,15,0	1/1:2,5:7:9:82,9,0	0/0:15,0:15:23.93:0,24,223	0/0:21,0:20:38.87:0,39,374	0/1:5,12:17:7.51:170,0,8	0/0:14,0:13:24.07:0,24,277	1/1:3,10:13:33.01:301,33,0	1/1:4,9:13:17.74:164,18,0	0/0:5,2:7:3.01:0,3,34	1/1:7,4:10:18:164,18,0	1/1:2,4:6:12:109,12,0	1/1:3,4:4:9:82,9,0	0/0:12,0:12:20.90:0,21,183	1/1:6,11:16:23.96:211,24,0	1/1:5,15:19:20.47:214,20,0	1/1:3,4:7:5.99:55,6,0
chr10	18070171	.	C	CTTTT	7521.37	PASS	AB=0.849;AC=49;AF=0.875;AN=56;BaseQRankSum=-4.001;DP=405;FS=14.195;HRun=11;HaplotypeScore=99.1798;InbreedingCoeff=0.2396;MQ=41.22;MQ0=15;MQRankSum=-2.301;QD=19.59;ReadPosRankSum=-3.310;VQSLOD=1.0207;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:20:9.66:0,10,25	1/1:5,3:8:14.25:274,14,0	0/1:6,0:3:0:0,0,0	0/1:8,0:1:0:0,0,0	1/1:11,6:15:20.24:358,20,0	0/1:8,11:20:7.86:607,0,8	1/1:10,2:12:9.03:203,9,0	1/1:27,5:36:40.02:610,40,0	1/1:4,5:9:6.02:139,6,0	1/1:6,8:16:33.05:652,33,0	1/1:14,2:15:12.04:201,12,0	1/1:12,2:13:15.02:277,15,0	1/1:5,4:9:18.06:350,18,0	1/1:5,3:8:3.01:69,3,0	1/1:5,6:14:21.07:389,21,0	1/1:15,2:18:23.97:386,24,0	0/1:15,6:19:14.20:452,0,14	1/1:12,1:12:9.03:163,9,0	1/1:13,2:15:7.09:192,7,0	1/1:10,4:15:26.78:426,27,0	0/1:3,0:4:17.64:59,0,18	1/1:9,1:9:4.06:92,4,0	1/1:4,3:10:8.88:104,9,0	1/1:7,1:4:3.01:69,3,0	1/1:7,3:10:18.02:287,18,0	1/1:17,6:22:28.84:607,29,0	1/1:14,7:23:27.01:415,27,0	1/1:4,2:5:6.02:139,6,0
chr10	18070631	.	CT	C	1398.84	PASS	AB=0.737;AC=23;AF=0.411;AN=56;BaseQRankSum=-5.014;DP=564;FS=4.088;HRun=15;HaplotypeScore=61.0697;InbreedingCoeff=0.5339;MQ=55.74;MQ0=22;MQRankSum=5.578;QD=4.87;ReadPosRankSum=3.093;VQSLOD=1.8964;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:30:43:0,43,229	0/1:3,5:7:1.92:46,0,2	0/0:33,0:12:5.97:0,6,46	0/0:34,1:9:5.94:0,6,44	0/1:10,10:21:9.33:47,0,9	0/0:5,0:18:11.83:0,12,58	0/0:8,0:14:8.64:0,9,48	0/0:24,0:26:29.85:0,30,167	0/0:8,0:22:10.17:0,10,64	0/1:9,7:13:2.84:77,0,3	0/1:6,7:14:13.13:45,0,13	0/0:16,0:16:22.39:0,22,121	1/1:7,4:10:5.80:38,6,0	1/1:4,10:13:17.71:115,18,0	0/1:6,1:19:1.87:2,0,62	0/0:4,0:15:14.41:0,14,79	0/1:14,27:39:4.35:287,0,4	0/0:8,0:26:28.70:0,29,167	0/1:17,0:15:3.17:3,0,49	0/0:6,0:12:12.42:0,12,67	0/0:1,0:2:5.52:0,6,25	1/1:7,7:13:14.68:96,15,0	1/1:10,11:21:19.41:121,19,0	1/1:8,10:18:20.72:114,21,0	0/0:12,0:14:23.31:0,23,143	1/1:12,14:28:35.60:209,36,0	1/1:15,7:24:26.29:161,26,0	1/1:4,12:15:35.45:231,35,0
chr10	18072427	.	A	ATTT	12789.21	PASS	AB=0.587;AC=50;AF=0.893;AN=56;BaseQRankSum=-3.052;DP=532;FS=5.909;HRun=11;HaplotypeScore=88.1281;InbreedingCoeff=0.5310;MQ=67.14;MQ0=1;MQRankSum=-4.058;QD=25.18;ReadPosRankSum=0.552;VQSLOD=3.8281;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:8,0:31:34.96:35,0,35	1/1:4,2:7:17.99:230,18,0	0/0:11,0:9:8.59:0,9,87	0/0:13,0:11:4.01:0,4,140	1/1:10,16:32:64.31:936,64,0	1/1:4,1:26:20.01:390,20,0	1/1:1,1:12:25.18:219,25,0	1/1:7,21:31:78.11:1157,78,0	1/1:0,1:15:29.92:265,30,0	1/1:2,16:19:47.10:751,47,0	1/1:1,11:14:38.92:537,39,0	1/1:1,1:21:50.85:428,51,0	1/1:3,11:17:33.07:535,33,0	1/1:9,11:21:21:324,21,0	0/1:4,0:12:8.14:161,0,8	1/1:2,0:20:38.35:281,38,0	1/1:3,14:20:36.08:606,36,0	1/1:2,2:26:60.08:497,60,0	1/1:2,14:18:45.07:675,45,0	1/1:4,14:21:45.02:654,45,0	1/1:2,10:12:30.03:492,30,0	1/1:1,8:11:24.08:421,24,0	1/1:3,9:13:18.04:305,18,0	1/1:5,15:21:39.13:733,39,0	1/1:1,0:15:25.17:190,25,0	1/1:5,16:22:50.97:610,51,0	1/1:7,14:27:29.90:485,30,0	1/1:4,17:23:48.16:871,48,0
chr10	18072721	.	CAAA	C	10848.32	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-5.848;DP=544;FS=0.000;HRun=12;HaplotypeScore=107.9177;InbreedingCoeff=0.9187;MQ=73.59;MQ0=9;MQRankSum=-2.461;QD=27.12;ReadPosRankSum=3.518;VQSLOD=3.9961;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:2,0:19:41.83:0,42,320	1/1:2,13:15:33.08:413,33,0	0/0:60,0:19:28.83:0,29,358	0/0:59,0:28:45.53:0,46,387	1/1:1,23:24:72.04:852,72,0	1/1:4,18:22:42.12:531,42,0	1/1:2,12:14:27.08:341,27,0	1/1:8,20:28:63.16:783,63,0	1/1:3,10:13:21.05:265,21,0	1/1:1,15:16:45.12:552,45,0	1/1:0,13:13:33.10:416,33,0	1/1:2,12:14:24.06:303,24,0	1/1:1,9:10:24.07:294,24,0	1/1:0,6:6:15.05:189,15,0	1/1:3,15:17:36.10:455,36,0	1/1:0,11:11:33.11:417,33,0	1/1:4,26:30:66.20:834,66,0	1/1:3,19:22:45.10:569,45,0	1/1:7,5:12:30.04:354,30,0	1/1:5,6:11:21.03:252,21,0	1/1:4,4:8:21:231,21,0	1/1:1,2:3:3:38,3,0	1/1:4,7:11:15.02:189,15,0	1/1:3,6:9:14.93:189,15,0	1/1:2,15:17:30.08:379,30,0	1/1:1,22:23:66.19:816,66,0	1/1:4,19:23:45.11:554,45,0	1/1:2,24:25:44.47:632,44,0
chr10	18072742	.	TA	T	1237.56	PASS	AB=0.984;AC=9;AF=0.161;AN=56;BaseQRankSum=-1.476;DP=567;FS=0.509;HRun=10;HaplotypeScore=124.0074;InbreedingCoeff=0.8470;MQ=74.21;MQ0=11;MQRankSum=-1.696;QD=9.59;ReadPosRankSum=-2.701;VQSLOD=1.8666;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:27.07:0,27,299	0/0:15,0:15:30.07:0,30,321	0/0:62,0:24:19.33:0,19,263	0/1:60,1:30:30.16:30,0,136	0/0:26,2:28:20.08:0,20,678	0/0:20,0:21:47.96:0,48,512	0/0:14,0:14:15.02:0,15,156	1/1:4,27:31:77.94:669,78,0	0/0:12,0:12:24.06:0,24,264	0/0:23,1:24:31.07:0,31,557	0/0:15,0:15:39.07:0,39,415	0/0:13,0:13:21.06:0,21,232	0/0:13,0:13:30:0,30,316	0/0:10,0:10:27.03:0,27,285	0/0:15,0:14:33.09:0,33,365	0/0:9,0:9:21.06:0,21,232	0/0:32,0:32:66.15:0,66,712	0/0:23,0:22:54.11:0,54,577	1/1:2,13:15:38.99:338,39,0	1/1:1,8:9:21:182,21,0	1/1:1,12:13:20.99:182,21,0	0/0:5,0:5:15.04:0,15,166	0/0:8,0:8:18.05:0,18,199	0/0:6,0:6:15.04:0,15,166	0/0:17,0:17:33.09:0,33,365	0/0:28,0:28:72.19:0,72,790	0/0:20,0:20:51.10:0,51,538	0/0:30,1:30:43.05:0,43,639
chr10	18073181	.	CCT	C	181.23	PASS	AB=1.000;AC=12;AF=0.214;AN=56;BaseQRankSum=1.025;DP=244;FS=2.163;HRun=0;HaplotypeScore=45.0880;InbreedingCoeff=0.4849;MQ=88.04;MQ0=0;MQRankSum=-1.234;QD=4.21;ReadPosRankSum=-4.059;VQSLOD=0.7905;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,105,1450	0/0:2,0:2:5.99:0,6,71	0/0:17,0:16:33.15:0,33,469	0/0:17,0:16:29.66:0,30,361	0/0:10,0:10:23.88:0,24,272	0/1:8,0:8:24.76:25,0,98	0/0:10,0:10:1.41:0,1,138	1/1:14,0:14:21.44:179,21,0	1/1:3,1:4:4.05:13,4,0	0/0:6,0:6:15.02:0,15,142	0/0:2,0:2:5.81:0,6,57	0/0:2,0:2:5.92:0,6,42	0/0:7,0:7:21.04:0,21,224	0/0:14,0:14:41.32:0,41,410	0/0:4,0:4:12.03:0,12,151	0/0:2,0:2:6.01:0,6,56	0/0:18,0:18:29.89:0,30,350	0/1:5,0:5:18.88:19,0,57	1/1:2,0:2:2.97:20,3,0	1/1:3,0:3:3.47:28,3,0	1/1:1,6:7:3.01:46,3,0	0/0:7,0:7:11.90:0,12,95	0/0:6,0:6:15.03:0,15,155	0/0:14,0:14:41.76:0,42,383	0/0:2,0:2:5.99:0,6,48	0/0:9,0:9:15:0,15,136	0/0:12,0:12:23.96:0,24,229	0/0:5,0:5:11.99:0,12,130
chr10	18073183	.	T	TC	2038.78	PASS	AB=0.686;AC=34;AF=0.680;AN=50;BaseQRankSum=-2.764;DP=254;FS=22.817;HRun=9;HaplotypeScore=39.5330;InbreedingCoeff=0.2815;MQ=87.02;MQ0=0;MQRankSum=-2.192;QD=13.15;ReadPosRankSum=1.169;VQSLOD=1.3831;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:37:82.99:0,83,705	0/1:2,0:2:0:0,0,0	0/0:18,0:17:24.38:0,24,242	0/0:17,0:16:2.93:0,3,131	0/1:4,8:12:13.89:87,0,14	1/1:5,2:8:11.52:81,12,0	1/1:1,0:10:17.36:107,17,0	0/0:13,0:13:0.46:0,0,1	1/1:5,0:5:3:25,3,0	1/1:2,5:7:15.04:166,15,0	0/1:2,1:3:19.99:27,0,20	1/1:2,0:2:2.84:14,3,0	0/1:1,6:7:5:178,0,5	0/1:5,8:14:16.92:315,0,17	1/1:6,0:6:11.48:76,11,0	1/1:0,2:2:6.02:66,6,0	0/1:6,13:19:1.84:208,0,2	1/1:3,3:6:8.86:76,9,0	./.	./.	0/0:7,0:7:1.82:0,2,5	1/1:4,3:7:3.01:33,3,0	1/1:1,5:6:12.03:132,12,0	1/1:6,8:14:30.07:320,30,0	./.	1/1:3,4:7:9.02:99,9,0	1/1:5,8:13:13.59:137,14,0	1/1:5,0:5:3.01:33,3,0
chr10	18073970	.	AT	A	7474.65	PASS	AB=1.000;AC=49;AF=0.875;AN=56;BaseQRankSum=-3.136;DP=434;FS=9.124;HRun=10;HaplotypeScore=68.9007;InbreedingCoeff=0.8122;MQ=77.22;MQ0=0;MQRankSum=-1.688;QD=19.41;ReadPosRankSum=1.285;VQSLOD=5.5902;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:31.58:0,32,116	1/1:2,6:8:14.99:130,15,0	0/0:25,0:14:10.62:0,11,143	0/1:11,0:8:0.55:1,0,25	1/1:1,18:20:56.73:470,57,0	1/1:2,16:18:41.99:363,42,0	1/1:2,11:13:26.99:233,27,0	1/1:5,35:40:99:862,102,0	0/0:8,0:9:9.67:0,10,56	1/1:4,19:23:55.35:428,55,0	1/1:1,12:13:29.77:246,30,0	1/1:3,12:15:32.99:285,33,0	1/1:1,16:17:41.73:348,42,0	1/1:2,9:11:26.99:233,27,0	1/1:1,9:10:21:181,21,0	1/1:1,8:9:20.99:181,21,0	1/1:0,19:19:47.99:415,48,0	1/1:7,15:22:32.58:270,33,0	1/1:3,20:23:59.92:507,60,0	1/1:2,13:15:38.84:316,39,0	1/1:1,1:2:3:26,3,0	1/1:0,3:3:9:78,9,0	1/1:1,10:11:29.99:259,30,0	1/1:0,5:5:12:104,12,0	1/1:2,17:19:44.99:388,45,0	1/1:4,12:16:43.89:345,44,0	1/1:3,26:29:63.46:546,63,0	1/1:2,10:12:29.99:259,30,0
chr10	18076375	.	AGAAGGGAAGGGAAGG	A	9466.43	PASS	AB=0.625;AC=17;AF=0.304;AN=56;BaseQRankSum=12.235;DP=673;FS=3.169;HRun=0;HaplotypeScore=287.1116;InbreedingCoeff=0.9154;MQ=62.66;MQ0=16;MQRankSum=-11.126;QD=69.10;ReadPosRankSum=4.489;VQSLOD=4.3411;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:60,0:60:99:0,153,9261	0/0:11,0:11:30.10:0,30,1841	0/0:58,0:25:42.59:0,43,1745	0/0:65,0:31:39.72:0,40,1629	0/0:22,0:22:63.20:0,63,3788	1/1:5,9:14:39.13:1484,39,0	1/1:9,3:11:15.04:526,15,0	0/0:31,0:30:72.24:0,72,3636	0/1:8,0:19:10.07:10,0,83	0/0:26,0:26:72.25:0,72,4641	0/0:23,0:23:60.21:0,60,3751	1/1:10,11:21:45.10:1574,45,0	0/0:20,0:20:39.13:0,39,2653	0/0:21,0:21:63.22:0,63,3561	1/1:7,18:25:57.20:2430,57,0	1/1:9,4:13:21.06:736,21,0	0/0:25,0:25:69.24:0,69,4497	1/1:9,1:10:15.05:562,15,0	0/0:26,0:23:57.20:0,57,3355	0/0:22,0:22:60.19:0,60,3255	0/0:26,0:25:63.22:0,63,3896	1/1:2,11:13:36.11:1420,36,0	0/0:18,0:18:45.15:0,45,2737	0/0:25,0:25:57.20:0,57,3636	1/1:4,5:9:18.06:723,18,0	0/0:17,0:17:45.15:0,45,3132	0/0:25,0:25:66.22:0,66,3885	0/0:15,0:15:45.15:0,45,3046
chr10	18076433	.	G	GT	27532.54	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-4.085;DP=661;FS=11.998;HRun=0;HaplotypeScore=110.5944;InbreedingCoeff=0.9999;MQ=73.57;MQ0=0;MQRankSum=-9.113;QD=43.84;ReadPosRankSum=5.075;VQSLOD=3.3713;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,39:42:99:1698,108,0	1/1:1,12:13:36.12:575,36,0	0/0:14,0:14:42.05:0,42,527	0/0:19,0:19:52.37:0,52,664	1/1:1,26:27:75.26:1197,75,0	1/1:0,24:24:66.23:1051,66,0	1/1:0,23:23:69.24:1101,69,0	1/1:1,31:32:90.23:1323,90,0	1/1:2,18:20:51.11:781,51,0	1/1:3,30:33:96.28:1504,96,0	1/1:0,22:22:57.19:909,57,0	1/1:0,21:21:63.21:995,63,0	1/1:2,22:24:60.20:955,60,0	1/1:0,21:21:63.21:1006,63,0	1/1:1,28:29:84.29:1327,84,0	1/1:0,20:20:57.19:909,57,0	1/1:0,17:17:45.15:718,45,0	1/1:0,13:13:39.13:621,39,0	1/1:0,26:26:78.26:1224,78,0	1/1:1,28:29:84.29:1338,84,0	1/1:0,25:25:63.21:1006,63,0	1/1:2,24:26:66.22:1035,66,0	1/1:2,22:24:60.20:953,60,0	1/1:3,20:23:60.19:930,60,0	1/1:0,16:16:48.16:767,48,0	1/1:2,24:26:78.19:1171,78,0	1/1:0,29:29:84.29:1340,84,0	1/1:1,22:23:69.24:1098,69,0
chr10	18076495	.	CT	C	8822.40	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=4.761;DP=609;FS=4.996;HRun=9;HaplotypeScore=105.6314;InbreedingCoeff=0.9828;MQ=65.35;MQ0=4;MQRankSum=-1.071;QD=21.52;ReadPosRankSum=0.720;VQSLOD=4.8005;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,36:42:99:905,99,0	1/1:1,5:6:18.01:165,18,0	0/0:25,0:17:30.46:0,30,252	0/0:15,0:9:17.83:0,18,167	1/1:5,20:25:57.03:521,57,0	0/0:25,0:25:66.20:0,66,762	0/0:16,1:17:8.66:0,9,353	1/1:9,30:38:86.97:782,87,0	1/1:8,3:10:23.86:150,24,0	1/1:6,25:31:81.03:735,81,0	1/1:5,14:19:42:379,42,0	0/0:14,0:14:30.08:0,30,338	1/1:3,10:13:30.01:274,30,0	1/1:5,6:11:24.01:218,24,0	0/0:28,0:28:75.22:0,75,863	0/0:14,0:14:33.10:0,33,381	1/1:5,21:24:60.03:549,60,0	0/0:28,0:29:57.72:0,58,761	1/1:4,23:27:78.03:710,78,0	1/1:6,18:24:60:540,60,0	1/1:5,11:15:24:219,24,0	0/0:12,0:12:33.10:0,33,381	1/1:2,22:24:63.03:576,63,0	1/1:3,18:21:19.16:432,19,0	0/0:18,1:19:13.66:0,14,398	1/1:5,21:26:63.02:577,63,0	1/1:8,26:33:78:706,78,0	1/1:0,14:14:42.02:384,42,0
chr10	18076499	.	TTTTTTCTTTTC	T	1266.80	PASS	AB=1.000;AC=12;AF=0.214;AN=56;BaseQRankSum=3.883;DP=599;FS=8.788;HRun=0;HaplotypeScore=240.3468;InbreedingCoeff=-0.0699;MQ=61.69;MQ0=5;MQRankSum=-4.706;QD=5.35;ReadPosRankSum=-8.039;VQSLOD=-0.6120;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:42:16.05:0,16,3245	0/1:6,0:6:9.33:9,0,589	0/0:22,0:14:11.13:0,11,541	0/0:15,0:8:17.55:0,18,406	0/1:25,0:25:30.01:30,0,1906	0/0:25,0:25:66.23:0,66,3317	0/0:15,0:15:39.13:0,39,1603	0/0:39,0:37:6.03:0,6,2250	1/1:4,7:10:27.07:648,27,0	0/1:30,0:30:99:151,0,1802	0/1:19,0:19:59.93:60,0,1113	0/0:14,0:14:33.10:0,33,1632	0/1:13,0:13:52.09:52,0,699	0/0:12,0:12:32.78:0,33,1135	0/0:27,0:26:75.25:0,75,3498	0/0:14,0:14:33.11:0,33,1687	0/0:27,0:25:27.96:0,28,2297	0/0:30,0:30:75.26:0,75,3626	0/1:28,0:28:99:104,0,2135	0/1:23,0:23:74.25:74,0,1697	0/0:15,0:14:26.58:0,27,975	0/0:11,0:11:33.11:0,33,1516	0/1:24,0:24:84.92:85,0,1628	0/0:21,0:21:29.70:0,30,1933	0/0:18,0:18:48.16:0,48,1845	0/1:24,0:24:99:102,0,1689	0/1:34,0:33:99:108,0,2226	0/0:14,0:14:41.20:0,41,1157
chr10	18078493	.	AG	A	448.85	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=1.115;DP=563;FS=12.000;HRun=5;HaplotypeScore=73.6283;InbreedingCoeff=0.9946;MQ=80.06;MQ0=0;MQRankSum=-0.826;QD=26.40;ReadPosRankSum=3.291;VQSLOD=2.8949;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,123,1638	0/0:8,0:8:24.08:0,24,328	0/0:23,0:20:49.32:0,49,566	0/0:30,1:28:47.67:0,48,510	0/0:28,0:28:78.26:0,78,1065	0/0:16,0:16:42.14:0,42,573	0/0:22,0:22:60.19:0,60,805	0/0:22,0:22:57.16:0,57,735	1/1:0,17:17:48.14:544,48,0	0/0:13,0:13:39.13:0,39,531	0/0:25,0:25:75.23:0,75,1007	0/0:20,0:20:51.12:0,51,661	0/0:21,0:21:57.17:0,57,747	0/0:11,0:11:30.10:0,30,410	0/0:12,0:12:36.10:0,36,464	0/0:21,0:21:60.19:0,60,804	0/0:28,0:28:81.25:0,81,1084	0/0:16,0:16:39.13:0,39,533	0/0:19,0:19:48.12:0,48,606	0/0:21,0:21:60.20:0,60,813	0/0:11,0:11:30.10:0,30,408	0/0:21,0:21:63.21:0,63,859	0/0:20,0:20:57.18:0,57,762	0/0:17,0:17:45.15:0,45,615	0/0:21,0:21:54.18:0,54,737	0/0:25,0:25:75.25:0,75,1024	0/0:20,0:20:60.19:0,60,803	0/0:9,0:9:24.06:0,24,310
chr10	18079000	.	CT	C	1803.71	PASS	AB=0.861;AC=12;AF=0.214;AN=56;BaseQRankSum=11.234;DP=575;FS=0.000;HRun=11;HaplotypeScore=64.6940;InbreedingCoeff=0.7156;MQ=77.48;MQ0=0;MQRankSum=1.393;QD=13.17;ReadPosRankSum=0.598;VQSLOD=3.5333;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,3:30:7.01:0,7,633	0/1:7,1:8:0.58:1,0,199	0/0:12,0:12:9.81:0,10,74	0/0:16,1:18:0.45:0,0,88	0/0:22,0:22:63.10:0,63,644	0/0:27,1:28:44.50:0,44,654	0/0:22,1:23:35.51:0,36,583	1/1:4,15:20:46.93:370,47,0	1/1:3,18:23:49.02:381,49,0	0/0:29,0:29:66.16:0,66,697	0/0:22,1:23:38.49:0,38,601	0/0:18,0:18:45.09:0,45,466	0/0:20,2:22:7.94:0,8,488	0/0:12,1:13:5.38:0,5,245	0/0:22,0:23:50.28:0,50,564	0/0:21,1:22:32.50:0,32,551	0/1:20,5:25:35.60:36,0,444	0/0:20,0:19:60.15:0,60,640	1/1:3,11:16:37.01:279,37,0	1/1:1,15:16:41.94:345,42,0	1/1:3,26:29:68.92:567,69,0	0/0:24,0:24:60.13:0,60,624	0/0:26,0:26:72.15:0,72,748	0/0:14,0:16:35.03:0,35,385	0/0:14,1:15:8.43:0,8,289	0/0:18,2:20:13.40:0,13,386	0/0:25,0:25:72.16:0,72,753	0/0:9,0:9:21.04:0,21,217
chr10	18079433	.	A	AT	15667.37	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-6.763;DP=593;FS=7.430;HRun=8;HaplotypeScore=50.1624;InbreedingCoeff=0.9966;MQ=77.61;MQ0=0;MQRankSum=-7.755;QD=27.93;ReadPosRankSum=4.621;VQSLOD=4.9887;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,28:30:79.37:870,79,0	1/1:1,9:10:24.07:277,24,0	0/0:19,0:17:34.55:0,35,300	0/0:13,0:12:26.87:0,27,243	1/1:1,19:20:57.10:641,57,0	1/1:1,15:15:39.12:450,39,0	1/1:2,9:11:24.07:277,24,0	1/1:6,34:40:99:1140,102,0	1/1:2,17:19:51.15:589,51,0	1/1:8,25:32:81.24:932,81,0	1/1:5,18:23:51.11:574,51,0	1/1:1,20:21:51.15:589,51,0	1/1:5,16:21:45.13:519,45,0	1/1:3,15:18:39.12:450,39,0	1/1:1,14:15:45.13:517,45,0	1/1:5,14:19:39.12:450,39,0	1/1:3,21:24:60.14:678,60,0	1/1:2,26:28:75.22:866,75,0	1/1:5,18:23:54.11:593,54,0	1/1:4,29:33:81.21:921,81,0	1/1:4,12:16:36.11:415,36,0	1/1:1,13:14:36.11:415,36,0	1/1:4,17:21:48.14:554,48,0	1/1:1,23:24:60.18:692,60,0	1/1:5,11:16:33.10:381,33,0	1/1:2,26:28:78.17:874,78,0	1/1:1,25:26:59.92:692,60,0	1/1:1,10:11:29.90:311,30,0
chr10	18080224	.	T	TC	6890.20	PASS	AB=0.552;AC=24;AF=0.429;AN=56;BaseQRankSum=-12.435;DP=624;FS=9.429;HRun=6;HaplotypeScore=64.7114;InbreedingCoeff=0.8789;MQ=90.06;MQ0=0;MQRankSum=-6.197;QD=26.60;ReadPosRankSum=2.971;VQSLOD=5.0331;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:84.18:0,84,857	0/1:3,9:12:3.53:275,0,4	0/0:27,0:27:68.94:0,69,680	0/0:22,0:22:56.08:0,56,528	1/1:2,19:21:47.97:520,48,0	0/0:16,0:16:45.10:0,45,459	0/0:21,0:21:45.04:0,45,440	0/0:27,0:27:57.03:0,57,560	1/1:0,22:22:57.18:717,57,0	1/1:5,22:27:60.15:708,60,0	1/1:3,15:18:27.04:321,27,0	0/0:24,0:24:69.15:0,69,703	0/1:2,14:16:13.07:480,0,13	1/1:1,13:14:33.11:415,33,0	0/0:22,0:22:63.14:0,63,642	0/0:23,0:23:63.14:0,63,643	1/1:1,31:32:75.24:943,75,0	0/0:25,0:25:72.12:0,72,724	0/0:17,0:17:42.05:0,42,413	0/0:25,0:25:48.07:0,48,475	0/0:45,0:45:99:0,114,1162	0/0:14,0:14:35.96:0,36,345	1/1:5,13:18:18.06:227,18,0	1/1:1,23:24:66.21:830,66,0	0/0:22,0:22:51.10:0,51,519	1/1:5,12:17:36.05:398,36,0	1/1:2,24:26:57.02:717,57,0	1/1:1,11:12:27.09:340,27,0
chr10	18083195	.	A	AC	5535.34	PASS	AB=1.000;AC=51;AF=0.944;AN=54;BaseQRankSum=-2.771;DP=481;FS=13.930;HRun=2;HaplotypeScore=109.9889;InbreedingCoeff=0.2992;MQ=72.63;MQ0=4;MQRankSum=-1.094;QD=12.55;ReadPosRankSum=3.101;VQSLOD=2.5527;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:20:10.25:130,10,0	1/1:6,0:6:14.89:115,15,0	0/1:38,0:21:23.10:23,0,137	0/0:35,0:17:5.14:0,5,165	1/1:16,0:16:3.88:211,4,0	1/1:18,0:18:46.99:309,47,0	1/1:16,0:16:36.72:226,37,0	1/1:7,1:18:31.95:256,32,0	1/1:4,1:20:15.75:136,16,0	1/1:13,0:13:17.63:143,18,0	1/1:15,1:15:31.54:254,32,0	1/1:14,0:14:33.67:190,34,0	1/1:8,0:8:2.14:101,2,0	1/1:4,1:5:8.97:71,9,0	1/1:19,0:19:41.87:267,42,0	1/1:16,0:16:40.28:260,40,0	1/1:24,0:24:32.67:308,33,0	1/1:26,0:26:61.12:422,61,0	1/1:7,11:18:34.80:294,35,0	1/1:19,2:21:41.21:308,41,0	1/1:1,7:9:3:26,3,0	1/1:22,0:22:41.90:323,42,0	1/1:6,0:9:10.21:73,10,0	./.	1/1:23,0:22:57.80:404,58,0	1/1:20,0:19:24.81:299,25,0	1/1:22,2:24:32.73:327,33,0	1/1:1,1:2:6.01:59,6,0
chr10	18085148	.	G	GT	2633.15	PASS	AC=22;AF=0.407;AN=54;BaseQRankSum=1.625;DP=503;FS=4.131;HRun=0;HaplotypeScore=64.9062;InbreedingCoeff=0.9033;MQ=70.44;MQ0=1;MQRankSum=-10.309;QD=26.07;ReadPosRankSum=-2.462;VQSLOD=3.6346;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,123,1677	1/1:0,6:6:18.06:287,18,0	0/0:27,0:22:60.11:0,60,802	0/0:26,0:23:69.20:0,69,920	1/1:1,17:18:3:48,3,0	0/0:17,0:17:45.15:0,45,629	0/0:29,0:29:87.29:0,87,1216	0/0:24,0:24:69.23:0,69,965	0/0:22,0:22:63.21:0,63,881	1/1:0,13:13:39.13:621,39,0	./.	0/0:23,0:23:69.23:0,69,965	1/1:1,9:10:21.07:334,21,0	1/1:1,7:8:15.05:239,15,0	0/0:17,0:17:45.15:0,45,623	0/0:20,0:20:57.19:0,57,797	1/1:1,9:10:9.02:124,9,0	0/0:20,0:20:57.16:0,57,775	0/0:18,0:18:54.12:0,54,715	0/0:17,0:17:48.16:0,48,671	0/0:38,0:38:86.35:0,86,1445	0/0:27,0:27:81.26:0,81,1115	1/1:0,5:5:6.02:96,6,0	1/1:0,7:7:3.01:48,3,0	0/0:23,0:23:69.23:0,69,965	1/1:0,12:12:36.12:564,36,0	1/1:0,10:10:24.08:383,24,0	1/1:0,2:2:6.02:96,6,0
chr10	18085228	.	A	ATC	1764.34	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-3.407;DP=342;FS=4.743;HRun=0;HaplotypeScore=86.7545;InbreedingCoeff=0.8463;MQ=62.80;MQ0=13;MQRankSum=1.577;QD=13.27;ReadPosRankSum=2.824;VQSLOD=2.8867;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:38.49:0,38,253	1/1:2,1:3:6.02:80,6,0	0/0:33,0:14:14.33:0,14,144	0/0:27,0:12:11.37:0,11,114	1/1:24,0:24:34.66:297,35,0	0/0:10,0:9:20.90:0,21,163	0/0:12,0:12:8.68:0,9,59	0/0:19,0:18:45.70:0,46,318	0/0:9,0:8:5.70:0,6,38	1/1:12,3:15:31.08:317,31,0	1/1:9,0:9:11.83:82,12,0	0/0:6,0:6:8.48:0,8,57	1/1:8,1:9:13.74:115,14,0	1/1:9,0:9:5.11:47,5,0	0/0:10,0:9:20.75:0,21,139	0/0:6,0:6:5.99:0,6,51	1/1:14,0:13:17.75:124,18,0	0/0:13,0:13:18.92:0,19,171	0/0:6,0:6:14.94:0,15,114	0/0:7,0:7:11.97:0,12,94	0/0:5,0:5:8.97:0,9,70	0/0:10,0:10:14.93:0,15,115	1/1:2,1:3:5.98:64,6,0	1/1:3,2:5:8.90:121,9,0	0/0:10,0:10:20.77:0,21,147	1/1:17,0:16:29.67:282,30,0	1/1:17,1:17:41.01:397,41,0	1/1:7,0:6:5.96:47,6,0
chr10	18085230	.	CTCTTTTTT	C	2950.84	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-1.654;DP=328;FS=5.340;HRun=0;HaplotypeScore=93.0620;InbreedingCoeff=0.9084;MQ=59.44;MQ0=15;MQRankSum=0.716;QD=25.88;ReadPosRankSum=1.108;VQSLOD=2.5013;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:58.97:0,59,371	0/0:3,0:3:6.02:0,6,205	0/0:31,0:12:20.63:0,21,249	0/0:26,0:11:19.32:0,19,182	0/0:31,0:31:58.78:0,59,867	1/1:8,1:8:21.03:261,21,0	1/1:0,8:10:8.42:188,8,0	1/1:5,14:18:51.03:670,51,0	1/1:4,0:7:6.01:82,6,0	0/0:14,0:14:39.12:0,39,1064	0/0:8,0:8:21.74:0,22,224	1/1:4,0:4:12.01:128,12,0	0/0:8,0:8:17.64:0,18,200	0/0:8,0:8:19.83:0,20,242	1/1:3,3:8:20.98:408,21,0	1/1:4,0:5:8.97:117,9,0	0/0:14,0:12:20.47:0,20,427	1/1:11,0:12:29.95:337,30,0	1/1:7,0:6:13.01:125,13,0	1/1:5,1:6:14.93:134,15,0	1/1:4,0:4:12:103,12,0	1/1:6,2:10:14.75:176,15,0	0/0:4,0:4:12.04:0,12,287	0/0:5,0:5:11.97:0,12,298	1/1:4,4:9:20.91:442,21,0	0/0:18,0:17:48:0,48,992	0/0:18,0:17:44.99:0,45,990	0/0:5,0:4:6.02:0,6,204
chr10	18085231	.	TC	T	1738.07	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-0.776;DP=332;FS=0.605;HRun=1;HaplotypeScore=70.6139;InbreedingCoeff=0.8429;MQ=58.47;MQ0=17;MQRankSum=-1.062;QD=15.25;ReadPosRankSum=-2.478;VQSLOD=2.4980;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:58.96:0,59,368	0/0:3,0:3:5.68:0,6,28	0/0:31,0:12:12.84:0,13,183	0/0:25,0:10:11.09:0,11,126	0/0:32,0:31:34.80:0,35,257	1/1:9,0:8:21.01:186,21,0	1/1:10,0:10:8.69:64,9,0	1/1:19,1:18:50.21:392,50,0	1/1:7,0:6:8.89:75,9,0	0/0:14,0:14:34.97:0,35,265	0/0:9,0:9:7.78:0,8,76	1/1:5,0:5:13.96:101,14,0	0/0:9,0:9:6.55:0,7,97	0/0:8,0:8:1.52:0,2,42	1/1:10,0:9:20.89:163,21,0	1/1:4,0:4:9.01:82,9,0	0/0:14,0:12:16.91:0,17,123	1/1:13,0:13:29.28:211,29,0	1/1:3,4:6:14.99:129,15,0	1/1:6,0:6:15.01:135,15,0	1/1:4,0:4:12:103,12,0	1/1:9,0:9:14.99:129,15,0	0/0:4,0:4:5.78:0,6,44	0/0:7,0:7:8.10:0,8,54	1/1:10,0:9:20.97:181,21,0	0/0:19,0:18:40.18:0,40,284	0/0:18,0:16:29.18:0,29,257	0/0:5,0:4:6:0,6,54
chr10	18085233	.	T	TC	1422.76	PASS	AB=0.941;AC=20;AF=0.357;AN=56;BaseQRankSum=-4.489;DP=380;FS=18.953;HRun=1;HaplotypeScore=116.9210;InbreedingCoeff=0.5526;MQ=54.92;MQ0=20;MQRankSum=3.438;QD=7.57;ReadPosRankSum=4.289;VQSLOD=-0.4445;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:20:53.94:0,54,337	1/1:7,0:6:4.24:48,4,0	0/0:30,0:11:13.91:0,14,144	0/0:25,0:10:11.32:0,11,113	1/1:36,1:36:27.65:265,28,0	0/0:10,0:9:20.73:0,21,162	0/0:10,0:10:8.57:0,9,52	0/0:21,0:19:40.03:0,40,297	0/0:7,0:6:6.04:0,6,28	0/1:18,1:19:10.86:241,0,11	1/1:12,0:12:12.01:85,12,0	0/0:5,0:5:8.59:0,9,61	0/1:13,1:14:4.13:78,0,4	0/1:9,0:9:19.23:36,0,19	0/0:11,0:10:20.51:0,21,133	0/0:3,0:3:6:0,6,52	1/1:17,0:13:6.57:137,7,0	0/0:13,0:12:26.43:0,26,184	0/0:7,0:6:14.94:0,15,115	0/0:6,0:6:11.56:0,12,98	0/0:3,0:3:8.98:0,9,71	0/0:10,0:10:14.82:0,15,112	1/1:5,1:6:5.36:56,5,0	1/1:9,0:8:8.92:84,9,0	0/0:10,0:9:20.17:0,20,129	1/1:24,3:26:5.16:244,5,0	0/1:19,3:20:6.92:267,0,7	1/1:5,4:7:5.72:65,6,0
chr10	18085690	.	T	TTCTC	4385.26	PASS	AB=0.867;AC=47;AF=0.870;AN=54;BaseQRankSum=-1.259;DP=611;FS=3.125;HRun=0;HaplotypeScore=109.5391;InbreedingCoeff=-0.1028;MQ=75.00;MQ0=15;MQRankSum=-1.074;QD=7.47;ReadPosRankSum=-0.518;VQSLOD=3.1563;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:33,0:32:0.63:184,1,0	1/1:9,0:9:5.96:50,6,0	./.	0/1:49,0:24:0:0,0,0	0/1:14,0:17:37.84:74,0,38	0/1:10,0:17:34.56:156,0,35	1/1:15,3:21:8.01:141,8,0	1/1:34,0:34:18.06:318,18,0	0/1:13,0:20:5.46:5,0,147	1/1:7,8:17:26.83:456,27,0	1/1:11,0:11:3.01:52,3,0	1/1:12,7:23:8.77:153,9,0	1/1:9,8:17:8.95:199,9,0	1/1:16,7:31:6.02:138,6,0	1/1:9,6:19:6.02:139,6,0	1/1:13,4:20:11.50:165,11,0	1/1:11,3:15:6.28:85,6,0	1/1:10,5:18:9.97:213,10,0	1/1:15,0:15:6.49:127,6,0	0/1:29,0:29:12.13:137,0,12	1/1:16,8:26:3.01:71,3,0	0/1:16,0:15:17.15:72,0,17	1/1:14,1:13:6.02:110,6,0	1/1:22,0:20:12.02:198,12,0	1/1:10,0:14:5.49:25,5,0	1/1:33,0:33:33.09:512,33,0	1/1:17,11:30:24.08:504,24,0	0/1:7,2:10:37.57:100,0,38
chr10	18087456	.	CA	C	7532.60	PASS	AB=0.852;AC=51;AF=0.911;AN=56;BaseQRankSum=-2.450;DP=563;FS=3.779;HRun=11;HaplotypeScore=102.1909;InbreedingCoeff=0.3956;MQ=58.53;MQ0=21;MQRankSum=-2.081;QD=14.27;ReadPosRankSum=3.521;VQSLOD=5.2148;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:35:68.25:0,68,361	0/1:2,8:10:2.05:184,0,2	0/1:55,0:17:5.06:5,0,134	0/1:46,0:20:23.12:23,0,61	1/1:6,18:23:26.16:410,26,0	1/1:5,15:19:41.95:345,42,0	1/1:2,15:18:40.98:326,41,0	1/1:6,14:20:19.07:319,19,0	1/1:3,13:16:41.89:337,42,0	1/1:7,17:22:43.64:367,44,0	1/1:2,13:15:9.90:281,10,0	1/1:4,10:14:0.96:213,1,0	1/1:2,14:16:41.94:344,42,0	1/1:3,8:11:23.95:196,24,0	1/1:2,10:12:29.95:246,30,0	1/1:2,8:10:23.96:197,24,0	1/1:18,25:44:27.50:609,28,0	1/1:4,21:23:47.16:376,47,0	1/1:4,13:16:40.99:326,41,0	1/1:3,14:17:35.94:295,36,0	1/1:2,8:10:17.98:148,18,0	1/1:3,8:11:20.95:172,21,0	1/1:5,9:14:26.94:221,27,0	1/1:2,10:12:26.96:219,27,0	1/1:1,11:12:32.96:271,33,0	1/1:5,20:24:59.92:492,60,0	1/1:3,17:21:56.91:463,57,0	1/1:2,5:7:17.97:147,18,0
chr10	18087476	.	AAAACC	A	9315.83	PASS	AB=0.781;AC=24;AF=0.429;AN=56;BaseQRankSum=9.201;DP=583;FS=1.556;HRun=0;HaplotypeScore=148.0706;InbreedingCoeff=0.9178;MQ=62.15;MQ0=12;MQRankSum=-12.916;QD=33.63;ReadPosRankSum=2.097;VQSLOD=5.0177;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:95.91:0,96,2285	1/1:4,7:11:29.99:502,30,0	0/0:60,0:24:14.58:0,15,722	0/1:50,0:27:0.62:1,0,524	1/1:4,19:22:59.69:914,60,0	0/0:22,0:22:60.18:0,60,1673	0/0:21,0:21:54.05:0,54,1357	0/0:17,0:17:48.13:0,48,1141	0/0:21,0:21:63.20:0,63,1712	1/1:5,15:20:54.12:976,54,0	1/1:5,14:19:47.67:651,48,0	0/0:16,0:16:44.90:0,45,1056	1/1:4,13:17:48.10:867,48,0	1/1:1,11:12:26.53:515,27,0	0/0:14,0:14:42.11:0,42,1077	0/0:8,0:8:24.05:0,24,595	0/1:10,35:45:0.41:1508,0,0	0/0:23,0:21:54.15:0,54,1474	0/0:15,0:15:42.13:0,42,1168	0/0:16,0:16:48.16:0,48,1454	0/0:12,0:12:30.06:0,30,673	0/0:10,0:10:30.09:0,30,809	1/1:3,8:11:18.97:432,19,0	1/1:7,5:12:23.92:331,24,0	0/0:12,0:11:36.10:0,36,1012	1/1:6,18:24:63.10:1130,63,0	1/1:7,17:24:68.91:1153,69,0	1/1:2,5:9:20.47:335,20,0
chr10	18088798	.	G	GA	9305.91	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-15.292;DP=630;FS=1.372;HRun=6;HaplotypeScore=66.0598;InbreedingCoeff=0.9987;MQ=77.69;MQ0=0;MQRankSum=-0.449;QD=32.31;ReadPosRankSum=-0.187;VQSLOD=4.9788;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:75.16:0,75,758	0/0:18,0:18:48.07:0,48,478	0/0:23,0:23:30.56:0,31,475	0/0:28,0:26:47.77:0,48,464	0/0:29,0:29:81.18:0,81,826	1/1:1,19:20:54.17:679,54,0	1/1:3,19:22:51.16:642,51,0	1/1:2,36:38:99:1333,108,0	1/1:3,11:14:35.98:430,36,0	0/0:28,0:28:78.17:0,78,793	0/0:7,0:7:18.04:0,18,184	1/1:2,21:23:57.18:710,57,0	0/0:27,0:27:81.18:0,81,826	0/0:20,0:20:48.11:0,48,490	1/1:1,24:25:60.19:755,60,0	1/1:2,14:16:39.12:491,39,0	0/0:31,0:31:75.16:0,75,765	1/1:0,11:11:33.11:415,33,0	1/1:4,25:29:78.22:963,78,0	1/1:1,17:19:51.12:623,51,0	1/1:5,16:21:42.13:528,42,0	1/1:4,20:24:69.17:831,69,0	0/0:20,0:20:57.11:0,57,574	0/0:21,0:21:45.10:0,45,459	1/1:1,25:26:72.23:905,72,0	0/0:25,0:25:72.16:0,72,734	0/0:26,0:26:75.17:0,75,765	0/0:13,0:13:39.09:0,39,398
chr10	18088994	.	C	CGT	9154.23	PASS	AB=0.645;AC=23;AF=0.411;AN=56;BaseQRankSum=11.086;DP=930;FS=3.122;HRun=0;HaplotypeScore=140.7488;InbreedingCoeff=0.8930;MQ=68.19;MQ0=8;MQRankSum=2.637;QD=24.22;ReadPosRankSum=3.941;VQSLOD=5.6786;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:46:79.54:0,80,391	1/1:3,11:14:27.09:436,27,0	0/0:33,0:25:40.99:0,41,458	0/0:28,0:21:41.83:0,42,440	0/1:9,10:20:15.84:272,0,16	0/0:22,0:22:57.18:0,57,701	0/0:36,1:37:41.48:0,41,1022	0/0:36,0:35:69.05:0,69,825	0/0:46,0:47:99:0,123,1473	1/1:16,24:41:64.30:1064,64,0	1/1:6,17:23:36.12:587,36,0	0/0:32,0:32:78.23:0,78,948	1/1:11,29:39:41.24:1107,41,0	1/1:10,37:48:72.71:1169,73,0	0/0:44,0:44:99:0,105,1286	0/0:34,1:36:47.19:0,47,1072	1/1:3,29:31:50.83:920,51,0	0/0:38,0:38:99:0,99,1192	0/0:24,0:24:35.94:0,36,413	0/0:18,0:19:44.97:0,45,531	0/0:56,0:57:99:0,118,1573	0/0:26,0:25:48.07:0,48,536	1/1:10,18:28:5.23:599,5,0	1/1:9,42:50:78.27:1259,78,0	0/0:24,0:24:63.20:0,63,773	1/1:19,14:33:50.59:701,51,0	1/1:8,22:30:5.20:599,5,0	1/1:4,13:17:27.09:440,27,0
chr10	18089255	.	T	TTTTG	1320.27	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-5.381;DP=868;FS=0.000;HRun=0;HaplotypeScore=141.0418;InbreedingCoeff=0.9790;MQ=65.82;MQ0=2;MQRankSum=2.430;QD=36.67;ReadPosRankSum=0.560;VQSLOD=3.7842;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:44:81.35:0,81,1523	0/0:14,0:14:32.99:0,33,444	0/0:26,0:22:21.06:0,21,307	0/0:23,0:16:15.01:0,15,209	0/0:39,0:39:62.92:0,63,924	0/0:29,0:29:63.17:0,63,915	0/0:32,0:32:51.12:0,51,725	0/0:37,0:37:45.15:0,45,702	1/1:14,21:36:60.21:1415,60,0	0/0:51,0:50:87.28:0,87,1349	0/0:25,0:25:54.11:0,54,815	0/0:43,0:43:90.28:0,90,1395	0/0:24,0:24:66.22:0,66,1039	0/0:34,0:34:60.16:0,60,874	0/0:47,0:47:84.26:0,84,1304	0/0:36,0:37:81.26:0,81,1255	0/0:22,0:22:33.10:0,33,530	0/0:18,0:18:36.01:0,36,497	0/0:26,0:26:33:0,33,474	0/0:39,0:39:75.21:0,75,1148	0/0:29,0:29:54.18:0,54,863	0/0:35,0:35:60.15:0,60,910	0/0:32,0:32:72.10:0,72,1060	0/0:29,0:29:51.14:0,51,747	0/0:24,0:24:39.12:0,39,603	0/0:35,0:35:69.22:0,69,1064	0/0:24,0:24:48.15:0,48,741	0/0:14,0:14:30.09:0,30,459
chr10	18089570	.	TTGTATGTA	T	6679.52	PASS	AB=0.742;AC=35;AF=0.729;AN=48;BaseQRankSum=6.786;DP=694;FS=43.753;HRun=0;HaplotypeScore=183.5686;InbreedingCoeff=0.7633;MQ=61.85;MQ0=5;MQRankSum=-9.294;QD=15.83;ReadPosRankSum=-0.386;VQSLOD=2.6461;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:36:38.94:0,39,449	1/1:5,4:9:2.69:74,3,0	./.	./.	1/1:20,15:35:24.08:557,24,0	1/1:11,14:25:33.11:744,33,0	0/1:15,8:23:48.59:333,0,49	0/0:37,0:34:24.02:0,24,353	1/1:17,0:29:27.09:503,27,0	1/1:20,11:31:20.48:469,20,0	1/1:5,6:11:14.55:294,15,0	1/1:12,11:23:15.05:372,15,0	1/1:15,12:27:21.07:485,21,0	1/1:14,3:17:3.01:74,3,0	1/1:21,9:30:21.07:521,21,0	1/1:19,11:31:21.07:502,21,0	1/1:11,1:12:8.98:118,9,0	./.	0/0:29,0:28:27.09:0,27,981	0/0:34,0:34:60.19:0,60,2282	0/0:42,0:41:96.27:0,96,3152	1/1:19,13:32:29.95:541,30,0	1/1:21,7:28:9.02:223,9,0	./.	0/0:13,0:27:35.93:0,36,326	1/1:13,9:22:27.01:513,27,0	1/1:17,12:29:14.75:335,15,0	1/1:8,0:7:2.98:22,3,0
chr10	18089890	.	T	TTG	804.77	PASS	AC=14;AF=0.778;AN=18;BaseQRankSum=3.091;DP=53;FS=0.000;HRun=0;HaplotypeScore=73.6122;MQ=63.84;MQ0=9;MQRankSum=-3.162;QD=34.99;ReadPosRankSum=-0.675;VQSLOD=4.8785;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,6:6:14.41:153,14,0	./.	0/0:9,0:1:2.90:0,3,16	0/0:16,0:5:8.97:0,9,92	./.	./.	./.	./.	1/1:0,2:2:6.02:99,6,0	./.	./.	1/1:0,1:1:3.01:36,3,0	./.	./.	1/1:0,2:2:6.02:75,6,0	1/1:0,2:2:6.02:75,6,0	./.	1/1:0,7:6:21.07:380,21,0	./.	./.	1/1:0,3:3:8.24:80,8,0	./.	./.	./.	./.	./.	./.	./.
chr10	18089910	.	AT	A	375.32	PASS	AC=14;AF=0.778;AN=18;BaseQRankSum=3.402;DP=53;FS=4.312;HRun=1;HaplotypeScore=89.7627;MQ=80.65;MQ0=8;MQRankSum=-3.464;QD=16.32;ReadPosRankSum=3.277;VQSLOD=4.1352;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,6:6:14.68:101,15,0	./.	0/0:10,0:2:6.02:0,6,90	0/0:17,0:6:9.03:0,9,117	./.	./.	./.	./.	1/1:0,2:2:5.94:41,6,0	./.	./.	1/1:0,1:1:2.99:23,3,0	./.	./.	1/1:0,2:2:5.91:39,6,0	1/1:0,2:2:5.95:43,6,0	./.	1/1:0,7:7:20.95:169,21,0	./.	./.	1/1:0,3:3:8.65:55,9,0	./.	./.	./.	./.	./.	./.	./.
chr10	18089914	.	C	CCTAT	7980.97	PASS	AB=1.000;AC=49;AF=0.907;AN=54;BaseQRankSum=-2.749;DP=227;FS=19.703;HRun=0;HaplotypeScore=211.5630;InbreedingCoeff=0.2660;MQ=42.95;MQ0=2;MQRankSum=-0.500;QD=37.47;ReadPosRankSum=-3.230;VQSLOD=3.1402;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:13,6:19:39.05:764,39,0	./.	0/1:5,0:2:4.70:5,0,45	0/0:11,0:4:2.67:0,3,62	0/1:6,0:4:12.56:117,0,13	1/1:5,1:5:15.05:340,15,0	1/1:5,0:5:12:222,12,0	1/1:12,0:11:30.10:741,30,0	1/1:11,2:13:36.09:734,36,0	1/1:5,0:5:4.55:222,5,0	0/1:8,0:4:0.59:1,0,19	1/1:9,1:10:18.03:339,18,0	1/1:10,0:10:14.82:200,15,0	1/1:6,0:6:1.26:119,1,0	1/1:7,2:9:24.05:473,24,0	1/1:6,2:8:24.08:528,24,0	1/1:1,0:1:3.01:65,3,0	1/1:5,7:11:33.11:762,33,0	1/1:5,0:5:12.04:203,12,0	1/1:3,0:2:5.98:93,6,0	1/1:2,3:5:15.05:322,15,0	1/1:9,2:8:21.03:410,21,0	1/1:14,0:5:9.87:112,10,0	1/1:4,0:4:3.01:69,3,0	1/1:7,0:5:11.95:174,12,0	1/1:10,0:9:7.69:340,8,0	1/1:12,0:11:26.48:371,26,0	1/1:7,0:7:14.97:253,15,0
chr10	18091099	.	A	ATGTGCCAGCCACTGATCTAATGAAGC	30887.08	PASS	AB=0.889;AC=54;AF=0.964;AN=56;BaseQRankSum=-3.123;DP=205;FS=18.472;HRun=0;HaplotypeScore=217.8283;InbreedingCoeff=-0.0691;MQ=80.18;MQ0=0;MQRankSum=-1.371;QD=150.67;ReadPosRankSum=1.880;VQSLOD=3.0769;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,0:9:12.04:958,12,0	1/1:4,0:4:12.04:425,12,0	1/1:6,0:10:25.25:1718,25,0	0/1:5,1:7:36.80:1000,0,37	1/1:2,0:2:6.02:198,6,0	1/1:3,0:3:9.03:846,9,0	1/1:7,0:7:18.06:874,18,0	1/1:6,0:6:15.05:982,15,0	1/1:9,0:9:9.58:940,10,0	1/1:3,0:3:6.02:427,6,0	1/1:1,0:1:3.01:118,3,0	1/1:13,0:13:29.46:1699,29,0	1/1:10,0:10:19.35:2002,19,0	1/1:6,0:6:14.40:940,14,0	1/1:10,0:10:25.33:1409,25,0	1/1:4,0:4:6.02:658,6,0	1/1:13,0:13:33.09:2678,33,0	1/1:9,0:9:24.97:1920,25,0	1/1:6,0:6:18.06:1043,18,0	1/1:9,0:9:18.05:1337,18,0	1/1:12,0:12:30.03:1392,30,0	1/1:2,0:2:6.01:336,6,0	1/1:2,0:2:3.01:118,3,0	1/1:19,0:19:22.49:1769,22,0	1/1:6,0:6:15.05:1298,15,0	1/1:9,0:9:21.07:1544,21,0	0/1:7,0:7:1.55:1005,0,2	1/1:7,0:7:12.04:1251,12,0
chr10	18092553	.	T	TA	4688.03	PASS	AB=0.719;AC=25;AF=0.446;AN=56;BaseQRankSum=-7.341;DP=494;FS=0.000;HRun=10;HaplotypeScore=53.7199;InbreedingCoeff=0.7736;MQ=85.79;MQ0=0;MQRankSum=-2.036;QD=18.03;ReadPosRankSum=1.056;VQSLOD=5.2163;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,1:15:31.69:190,32,0	1/1:2,12:14:30.08:320,30,0	0/0:19,0:18:20.21:0,20,126	0/0:26,0:23:19.72:0,20,191	0/1:4,5:10:3.76:153,0,4	0/0:19,1:20:14.96:0,15,316	0/0:13,0:13:38.95:0,39,320	0/0:21,0:21:12.75:0,13,301	0/0:12,0:12:26.96:0,27,222	1/1:5,26:31:50.95:713,51,0	1/1:2,16:18:45.05:458,45,0	0/0:14,0:14:41.91:0,42,336	1/1:3,13:18:31.81:342,32,0	1/1:3,7:10:21.05:222,21,0	0/0:17,0:18:40.95:0,41,323	0/0:18,0:18:41.93:0,42,345	1/1:3,19:22:51.13:544,51,0	0/0:18,0:18:47.90:0,48,390	0/0:20,0:20:48.41:0,48,395	0/1:23,1:25:10.71:11,0,273	0/0:13,0:13:32.89:0,33,264	0/0:8,0:8:20.97:0,21,172	1/1:5,13:18:10.55:382,11,0	1/1:6,10:16:2.43:231,2,0	0/0:12,0:13:34.95:0,35,272	1/1:7,17:24:8.57:437,9,0	1/1:3,24:27:51.13:544,51,0	0/1:3,9:12:6.51:142,0,7
chr10	18092980	.	T	TCC	268.45	PASS	AB=0.892;AC=3;AF=0.054;AN=56;BaseQRankSum=-1.520;DP=581;FS=8.766;HRun=0;HaplotypeScore=125.5779;InbreedingCoeff=-0.0447;MQ=65.01;MQ0=5;MQRankSum=-0.192;QD=7.26;ReadPosRankSum=-0.581;VQSLOD=2.8521;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:14,13:27:99:342,0,261	0/1:6,0:6:1.09:1,0,58	0/0:67,0:23:33.16:0,33,421	0/0:65,0:24:30.31:0,30,395	0/0:28,0:28:33.31:0,33,687	0/0:18,0:18:49.67:0,50,617	0/0:13,0:13:39.03:0,39,476	0/0:24,0:24:63.41:0,63,729	0/0:20,0:19:50.24:0,50,502	0/0:9,0:10:4.18:0,4,285	0/0:11,0:11:30.09:0,30,378	0/0:16,0:16:38.28:0,38,449	0/0:15,0:15:32.67:0,33,452	0/0:14,0:14:40.68:0,41,521	0/0:22,0:22:66.02:0,66,769	0/0:14,0:13:30.04:0,30,361	0/0:16,0:16:38.15:0,38,514	0/0:17,0:17:47.04:0,47,558	0/0:23,0:23:63.11:0,63,795	0/0:17,0:17:44.25:0,44,503	0/0:13,0:13:27.54:0,28,372	0/0:15,0:15:41.99:0,42,496	0/0:20,0:20:29.63:0,30,541	0/0:26,0:26:68:0,68,835	0/0:18,0:18:48.06:0,48,584	0/0:25,0:25:24.47:0,24,697	0/0:17,0:17:41.80:0,42,512	0/1:4,0:4:0.79:1,0,83
chr10	18093359	.	GTGA	G	600.47	PASS	AC=20;AF=0.400;AN=50;BaseQRankSum=-4.126;DP=226;FS=1.154;HRun=0;HaplotypeScore=53.3534;InbreedingCoeff=0.6926;MQ=57.65;MQ0=0;MQRankSum=-1.078;QD=8.23;ReadPosRankSum=-0.919;VQSLOD=2.5269;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:18.04:0,18,212	1/1:5,0:5:5.93:40,6,0	0/0:17,0:16:40.84:0,41,679	0/0:13,0:12:4.63:0,5,293	1/1:7,0:7:5.97:46,6,0	0/0:5,0:5:3.01:0,3,39	0/0:13,0:13:9.02:0,9,125	0/0:6,0:6:11.95:0,12,120	0/0:9,0:9:5.97:0,6,68	1/1:1,10:11:29.49:191,29,0	1/1:5,0:5:2.97:20,3,0	0/0:7,0:7:6.02:0,6,92	1/1:7,0:7:5.93:40,6,0	1/1:6,0:6:2.97:20,3,0	0/0:13,0:13:12.04:0,12,149	0/0:12,0:12:30.07:0,30,354	1/1:7,0:7:8.93:67,9,0	0/0:4,0:4:6.01:0,6,82	0/0:5,0:5:11.98:0,12,137	./.	0/0:6,0:6:6:0,6,65	0/0:9,0:9:6.01:0,6,64	./.	1/1:7,0:7:2.97:20,3,0	0/0:11,0:11:11.91:0,12,109	1/1:11,0:11:29.66:205,30,0	1/1:7,0:7:17.84:127,18,0	./.
chr10	18095697	.	A	ATTC	4401.68	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-3.949;DP=445;FS=4.459;HRun=0;HaplotypeScore=65.4099;InbreedingCoeff=0.9908;MQ=78.88;MQ0=0;MQRankSum=-3.103;QD=48.91;ReadPosRankSum=-2.468;VQSLOD=5.9406;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,21:24:51.17:1096,51,0	0/0:11,0:11:33.11:0,33,530	0/0:12,0:12:27.08:0,27,376	0/0:11,0:11:26.70:0,27,309	0/0:10,0:10:27.07:0,27,405	0/0:16,0:16:45.15:0,45,723	0/0:17,0:17:48.15:0,48,745	1/1:1,13:15:39.12:818,39,0	0/0:28,0:28:84.20:0,84,1244	0/0:9,0:9:27.08:0,27,413	0/0:4,0:4:12.04:0,12,193	0/0:17,0:17:51.17:0,51,820	0/0:15,0:15:45.15:0,45,723	0/0:17,0:17:51.14:0,51,770	0/0:8,0:8:24.08:0,24,386	0/0:11,0:11:33.10:0,33,507	0/0:25,0:25:72.25:0,72,1157	0/0:32,0:32:93.32:0,93,1485	1/1:2,10:14:36.04:603,36,0	1/1:0,10:12:30.10:638,30,0	1/1:5,20:25:57.20:1247,57,0	0/0:11,0:11:33.10:0,33,506	0/0:12,0:12:27.09:0,27,434	0/0:19,0:19:51.17:0,51,814	0/0:15,0:15:45.15:0,45,718	0/0:20,0:20:57.19:0,57,916	0/0:18,0:18:51.13:0,51,767	0/0:17,0:17:51.14:0,51,772
chr10	18096760	.	TCTCAAG	T	9243.56	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=1.225;DP=572;FS=5.170;HRun=0;HaplotypeScore=142.9042;InbreedingCoeff=0.9967;MQ=86.89;MQ0=0;MQRankSum=-16.791;QD=66.03;ReadPosRankSum=3.047;VQSLOD=5.5678;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,132,4881	0/0:12,0:12:33.11:0,33,1224	0/0:25,0:26:72.76:0,73,2382	0/0:19,0:19:57.20:0,57,1857	0/0:17,0:17:51.17:0,51,1806	1/1:0,19:19:45.15:1130,45,0	1/1:0,12:12:30.10:748,30,0	0/0:22,0:22:63.22:0,63,2303	0/0:24,0:24:72.25:0,72,2581	0/0:26,0:26:78.27:0,78,2900	0/0:12,0:12:36.11:0,36,1146	1/1:0,21:21:63.22:1613,63,0	0/0:17,0:17:51.18:0,51,1833	0/0:19,0:19:57.20:0,57,2101	1/1:0,31:31:84.29:2150,84,0	1/1:0,12:12:33.11:845,33,0	0/0:33,0:33:99:0,99,3666	1/1:0,7:7:14.98:384,15,0	0/0:18,0:18:54.19:0,54,1977	0/0:19,0:19:57.20:0,57,2143	0/0:30,0:30:90.31:0,90,3208	1/1:0,12:12:33.11:845,33,0	0/0:13,0:13:39.13:0,39,1428	0/0:29,0:29:84.27:0,84,3031	1/1:0,26:26:63.17:1530,63,0	0/0:23,0:23:69.24:0,69,2589	0/0:21,0:21:63.19:0,63,2139	0/0:8,0:8:24.08:0,24,903
chr10	18098315	.	C	CT	995.67	PASS	AB=0.938;AC=3;AF=0.054;AN=56;BaseQRankSum=-6.852;DP=543;FS=0.679;HRun=7;HaplotypeScore=56.0134;InbreedingCoeff=0.6514;MQ=80.74;MQ0=0;MQRankSum=-1.230;QD=19.91;ReadPosRankSum=0.910;VQSLOD=3.1202;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,32:35:90.28:1087,90,0	0/0:6,0:6:15.02:0,15,145	0/0:16,0:16:23.98:0,24,224	0/1:14,1:15:12.19:12,0,180	0/0:17,0:17:48.07:0,48,463	0/0:23,0:23:57.09:0,57,550	0/0:33,0:33:87.12:0,87,834	0/0:23,0:23:60.09:0,60,580	0/0:15,0:15:39.02:0,39,368	0/0:12,0:12:27.04:0,27,261	0/0:14,0:14:39.05:0,39,372	0/0:16,0:16:33.03:0,33,313	0/0:16,0:16:45.05:0,45,427	0/0:24,0:24:63.10:0,63,608	0/0:22,0:22:63.08:0,63,601	0/0:14,0:14:36.04:0,36,341	0/0:46,0:46:99:0,126,1209	0/0:23,0:23:57.07:0,57,544	0/0:16,0:16:42.06:0,42,405	0/0:13,0:13:33.05:0,33,319	0/0:22,0:22:63.08:0,63,602	0/0:14,0:14:36.05:0,36,348	0/0:19,0:19:51.06:0,51,487	0/0:25,0:25:69.11:0,69,666	0/0:19,0:19:51.04:0,51,477	0/0:20,0:20:45.06:0,45,430	0/0:16,0:16:45.07:0,45,434	0/0:9,0:9:24.04:0,24,232
chr10	18099299	.	G	GCGGAGCGCGAGGAACAAA	88515.21	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-5.128;DP=621;FS=0.000;HRun=0;HaplotypeScore=268.2228;InbreedingCoeff=0.9606;MQ=74.33;MQ0=0;MQRankSum=-9.931;QD=154.75;ReadPosRankSum=4.797;VQSLOD=3.9474;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:28:57.20:1720,57,0	1/1:6,8:17:33.50:2544,34,0	0/0:20,0:20:45.13:0,45,1720	0/0:29,0:29:15.18:0,15,2076	1/1:21,5:28:62.84:3836,63,0	1/1:11,5:18:45.15:3253,45,0	1/1:24,3:29:78.27:4954,78,0	1/1:35,0:35:87.29:4571,87,0	1/1:8,8:20:48.16:3568,48,0	1/1:19,4:26:69.24:4890,69,0	1/1:13,3:18:45.15:2053,45,0	1/1:15,5:23:57.20:3761,57,0	1/1:13,11:24:69.24:4579,69,0	1/1:8,9:17:51.18:3756,51,0	1/1:13,12:28:66.23:4947,66,0	1/1:12,13:31:69.15:5396,69,0	1/1:17,5:29:54.19:3922,54,0	1/1:10,3:16:30.10:2072,30,0	1/1:13,5:18:48.13:2506,48,0	1/1:12,6:18:39.13:2401,39,0	1/1:5,1:8:12.04:803,12,0	1/1:13,7:20:57.20:3735,57,0	1/1:12,5:23:51.02:2537,51,0	1/1:15,5:22:33.11:2104,33,0	1/1:12,7:20:53.92:4093,54,0	1/1:17,8:28:81.26:5263,81,0	1/1:14,5:21:54.19:4213,54,0	1/1:2,2:7:12.04:1036,12,0
chr10	18099309	.	C	CG	41.99	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=3.547;DP=442;FS=0.000;HRun=0;HaplotypeScore=209.2480;InbreedingCoeff=0.5568;MQ=84.30;MQ0=0;MQRankSum=-2.636;QD=1.31;ReadPosRankSum=-2.843;VQSLOD=1.9886;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:1,15:16:27.58:133,28,0	0/0:12,0:12:28.40:0,28,330	0/0:24,0:23:48.37:0,48,755	0/0:29,0:29:77.46:0,77,1023	0/0:19,0:19:43.66:0,44,482	0/0:9,0:9:27.06:0,27,296	0/0:15,0:15:42.13:0,42,536	0/0:27,0:27:81.27:0,81,1131	0/0:10,0:10:30.06:0,30,318	0/0:21,0:21:57.16:0,57,721	0/0:17,0:17:11.19:0,11,462	0/0:13,0:13:33.09:0,33,390	0/0:18,0:18:48.11:0,48,526	0/0:14,0:14:42.10:0,42,476	0/0:20,0:20:57.14:0,57,643	0/0:20,0:20:54.13:0,54,594	0/0:18,0:18:33.56:0,34,386	0/0:8,0:8:24.07:0,24,293	0/0:14,0:14:36.10:0,36,444	0/0:10,0:10:6.02:0,6,247	0/0:3,0:3:9.02:0,9,106	0/0:14,0:14:40.96:0,41,435	0/0:19,0:19:42.70:0,43,492	0/1:16,0:16:10.47:10,0,150	0/0:13,0:13:32.03:0,32,372	0/0:25,0:25:69.20:0,69,865	0/0:13,0:13:36.10:0,36,443	0/0:5,0:5:9.02:0,9,102
chr10	18099311	.	G	GGA	316.84	PASS	AB=1.000;AC=4;AF=0.071;AN=56;BaseQRankSum=3.809;DP=446;FS=0.779;HRun=0;HaplotypeScore=214.2501;InbreedingCoeff=0.4643;MQ=79.83;MQ0=0;MQRankSum=-4.726;QD=7.54;ReadPosRankSum=-2.653;VQSLOD=2.5692;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,15:16:41.78:389,42,0	0/0:12,0:12:14.33:0,14,436	0/0:22,0:21:47.40:0,47,819	0/0:26,0:26:74.49:0,74,1039	0/0:19,0:19:42.16:0,42,659	0/0:9,0:9:27.09:0,27,413	0/0:15,0:15:42.14:0,42,668	0/0:30,0:30:90.26:0,90,1396	0/0:10,0:10:30.10:0,30,443	0/0:22,0:22:63.21:0,63,1004	0/0:18,0:18:29.58:0,30,679	0/0:13,0:13:36.12:0,36,554	0/0:18,0:18:51.17:0,51,768	0/0:14,0:14:42.14:0,42,632	0/0:20,0:20:57.19:0,57,862	0/0:20,0:20:57.19:0,57,853	0/0:18,0:18:33.11:0,33,514	0/0:10,0:10:27.09:0,27,424	0/0:14,0:14:42.14:0,42,654	0/1:10,0:10:4.69:5,0,339	0/0:3,0:3:9.03:0,9,142	0/0:14,0:14:26.40:0,26,519	0/0:21,0:21:34.09:0,34,671	0/1:16,0:16:32.88:33,0,185	0/0:13,0:13:17.04:0,17,488	0/0:25,0:25:75.26:0,75,1179	0/0:13,0:13:36.12:0,36,564	0/0:5,0:5:12.04:0,12,183
chr10	18099315	.	AT	A	81.74	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.617;DP=468;FS=0.811;HRun=1;HaplotypeScore=209.9563;InbreedingCoeff=0.8507;MQ=80.49;MQ0=0;MQRankSum=-4.124;QD=5.84;ReadPosRankSum=-2.246;VQSLOD=-0.4706;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,14:14:38.64:176,39,0	0/0:12,0:12:11.57:0,12,449	0/0:23,0:24:68.74:0,69,971	0/0:26,0:26:62.01:0,62,1071	0/0:20,0:20:39.86:0,40,641	0/0:10,0:10:27.09:0,27,419	0/0:15,0:15:45.09:0,45,686	0/0:34,0:34:99:0,99,1555	0/0:12,0:12:33.11:0,33,525	0/0:23,0:23:69.23:0,69,1081	0/0:20,0:20:39.75:0,40,777	0/0:13,0:13:36.12:0,36,573	0/0:19,0:19:57.11:0,57,873	0/0:14,0:14:42.14:0,42,668	0/0:20,0:20:57.19:0,57,907	0/0:20,0:20:57.19:0,57,907	0/0:19,0:19:39.04:0,39,580	0/0:11,0:11:33.08:0,33,482	0/0:15,0:15:45.15:0,45,716	0/0:11,0:11:12.32:0,12,382	0/0:4,0:4:9.03:0,9,143	0/0:15,0:15:27.66:0,28,552	0/0:21,0:21:39.88:0,40,775	0/0:18,0:18:19.92:0,20,330	0/0:13,0:13:15.48:0,15,505	0/0:26,0:26:78.27:0,78,1243	0/0:13,0:13:36.12:0,36,573	0/0:5,0:5:12.04:0,12,191
chr10	18099319	.	G	GGA	573.19	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.624;DP=488;FS=2.002;HRun=0;HaplotypeScore=220.4268;InbreedingCoeff=0.7397;MQ=76.34;MQ0=0;MQRankSum=-4.827;QD=40.94;ReadPosRankSum=-0.092;VQSLOD=3.0980;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,14:14:36.12:668,36,0	0/0:12,0:12:15.80:0,16,416	0/0:24,0:22:61.18:0,61,842	0/0:25,0:25:69.48:0,69,988	0/0:21,0:21:26.42:0,26,664	0/0:10,0:10:30.06:0,30,433	0/0:16,0:16:45.15:0,45,687	0/0:36,0:36:99:0,104,1479	0/0:13,0:13:39.09:0,39,551	0/0:24,0:24:69.23:0,69,1056	0/0:20,0:20:54.18:0,54,825	0/0:13,0:13:36.12:0,36,551	0/0:22,0:22:63.20:0,63,931	0/0:15,0:15:45.11:0,45,662	0/0:22,0:22:63.21:0,63,961	0/0:21,0:21:60.20:0,60,916	0/0:21,0:21:41.77:0,42,580	0/0:11,0:11:33.11:0,33,505	0/0:16,0:16:48.16:0,48,734	0/0:11,0:11:27.09:0,27,412	0/0:4,0:4:9.50:0,10,138	0/0:16,0:16:0.09:0,0,500	0/0:22,0:22:23.22:0,23,748	0/0:19,0:19:27.24:0,27,387	0/0:13,0:13:20.36:0,20,489	0/0:26,0:26:78.26:0,78,1175	0/0:14,0:14:36.10:0,36,527	0/0:7,0:7:18.06:0,18,273
chr10	18099330	.	AAG	A	2384.18	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=1.755;DP=495;FS=0.000;HRun=0;HaplotypeScore=188.4244;InbreedingCoeff=0.9530;MQ=73.18;MQ0=0;MQRankSum=-2.376;QD=27.09;ReadPosRankSum=-0.334;VQSLOD=4.2517;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,22:27:54.17:701,54,0	0/0:10,0:10:21.07:0,21,359	0/0:22,0:20:45.13:0,45,724	0/0:23,0:22:39.85:0,40,611	0/0:21,0:21:54.18:0,54,924	0/0:12,0:12:27.09:0,27,461	0/0:18,0:18:42.14:0,42,718	1/1:6,26:32:84.27:1102,84,0	0/0:12,0:12:27.09:0,27,448	0/0:23,0:23:63.22:0,63,1069	0/0:18,0:18:45.15:0,45,771	0/0:13,0:13:36.12:0,36,615	0/0:23,0:23:48.16:0,48,796	0/0:17,0:17:39.13:0,39,667	0/0:24,0:24:54.18:0,54,911	0/0:24,0:24:57.19:0,57,949	0/0:21,0:21:35.91:0,36,575	0/0:12,0:12:30.10:0,30,514	1/1:5,10:15:36.12:473,36,0	1/1:3,7:10:18.06:236,18,0	1/1:2,2:4:3.01:39,3,0	0/0:15,0:15:35.90:0,36,602	0/0:20,0:20:38.16:0,38,622	0/0:19,0:19:32.79:0,33,514	0/0:12,0:12:21.07:0,21,359	0/0:27,0:27:63.18:0,63,1049	0/0:12,0:12:30.10:0,30,514	0/0:9,0:9:24.08:0,24,373
chr10	18099360	.	AT	A	1552.40	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=0.814;DP=487;FS=0.000;HRun=8;HaplotypeScore=75.8267;InbreedingCoeff=0.5247;MQ=69.37;MQ0=3;MQRankSum=1.106;QD=11.50;ReadPosRankSum=-5.443;VQSLOD=1.5664;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:68.73:0,69,683	0/0:7,0:7:14.94:0,15,148	0/0:18,0:14:9.69:0,10,110	0/1:9,0:5:5.12:5,0,37	0/0:25,0:25:54.15:0,54,625	0/1:12,0:12:37.53:38,0,58	0/0:16,0:16:17.14:0,17,156	1/1:9,18:27:65.97:603,66,0	0/0:12,0:12:26.62:0,27,102	0/0:25,0:25:69.13:0,69,774	0/0:18,0:18:53.90:0,54,584	0/1:11,0:11:1.88:2,0,71	0/0:22,0:22:66.10:0,66,736	0/0:16,0:16:45.06:0,45,496	0/1:20,0:20:45.78:46,0,76	0/0:17,0:17:21.16:0,21,131	0/0:28,0:28:63.08:0,63,704	0/0:7,0:7:16.11:0,16,72	1/1:1,20:21:60.01:549,60,0	1/1:2,13:15:38.87:341,39,0	1/1:1,4:5:11.92:103,12,0	0/0:12,0:12:32.20:0,32,147	0/0:20,0:20:50.50:0,50,504	0/0:19,0:19:45.08:0,45,513	0/1:15,0:15:36.61:37,0,71	0/0:23,0:23:66.15:0,66,753	0/0:17,0:17:44.94:0,45,438	0/0:23,0:23:66.19:0,66,773
chr10	18099793	.	CTTCTCGG	C	815.13	PASS	AB=0.900;AC=9;AF=0.161;AN=56;BaseQRankSum=3.999;DP=591;FS=10.034;HRun=0;HaplotypeScore=197.1431;InbreedingCoeff=-0.1927;MQ=80.48;MQ0=0;MQRankSum=-6.779;QD=4.18;ReadPosRankSum=-4.671;VQSLOD=0.2251;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,126,4956	0/1:7,2:9:99:136,0,307	0/0:23,0:23:60.20:0,60,1992	0/0:16,0:16:48.16:0,48,1580	0/0:13,1:14:27.09:0,27,548	0/0:19,0:19:57.20:0,57,2284	0/0:25,0:25:75.26:0,75,3009	0/0:25,0:25:72.25:0,72,2619	0/0:21,0:21:63.22:0,63,2487	0/1:21,2:23:99:212,0,1165	0/1:10,5:15:99:208,0,459	0/0:21,0:21:63.22:0,63,2523	0/1:8,1:9:41.15:41,0,345	0/1:31,1:32:16.10:16,0,1599	0/0:15,0:15:45.15:0,45,1768	0/0:18,0:18:54.17:0,54,1974	0/1:30,0:30:99:144,0,812	0/0:28,0:28:84.29:0,84,3295	0/0:21,0:21:60.20:0,60,2156	0/0:13,0:13:36.12:0,36,1414	0/0:35,0:35:99:0,105,4207	0/0:13,0:13:39.13:0,39,1561	0/0:10,0:10:16.91:0,17,467	0/1:21,3:24:45.25:45,0,759	0/0:24,0:24:72.25:0,72,2925	0/1:28,2:30:71.10:71,0,1622	0/1:21,2:23:83.40:83,0,1299	0/0:9,0:9:13.02:0,13,368
chr10	18099799	.	G	GTTCCCCT	17650.83	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=10.841;DP=543;FS=0.000;HRun=0;HaplotypeScore=130.9243;InbreedingCoeff=0.9931;MQ=81.00;MQ0=0;MQRankSum=-17.029;QD=92.90;ReadPosRankSum=2.007;VQSLOD=6.0750;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,129,3359	1/1:2,4:8:21.07:692,21,0	0/0:18,0:18:51.12:0,51,1093	0/0:18,0:18:44.47:0,44,1031	1/1:1,10:12:24.42:701,24,0	0/0:18,0:18:54.19:0,54,1475	0/0:29,0:29:87.29:0,87,2205	0/0:20,0:20:60.19:0,60,1508	0/0:21,0:21:63.22:0,63,1741	1/1:3,13:19:57.15:1838,57,0	1/1:5,6:11:24:526,24,0	0/0:23,0:23:63.20:0,63,1690	1/1:1,5:7:17.99:552,18,0	1/1:1,25:28:78.27:3100,78,0	0/0:15,0:15:45.14:0,45,1165	0/0:14,0:14:42.14:0,42,1161	1/1:2,17:24:54.19:2124,54,0	0/0:28,0:28:84.27:0,84,2209	0/0:17,0:17:48.16:0,48,1256	0/0:13,0:13:39.11:0,39,972	0/0:37,0:37:99:0,111,2864	0/0:13,0:13:39.13:0,39,1043	1/1:0,9:10:24.08:974,24,0	1/1:4,15:21:45.62:1746,46,0	0/0:25,0:25:75.22:0,75,2023	1/1:2,21:24:72.25:2709,72,0	1/1:2,16:21:63.13:2205,63,0	1/1:0,5:5:12.04:486,12,0
chr10	18100148	.	AG	A	4039.32	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=9.701;DP=319;FS=29.551;HRun=2;HaplotypeScore=35.3835;InbreedingCoeff=0.9546;MQ=77.31;MQ0=0;MQRankSum=0.353;QD=33.94;ReadPosRankSum=1.803;VQSLOD=1.5001;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:69.22:0,69,1012	1/1:0,5:5:12.04:155,12,0	0/0:10,0:9:27.05:0,27,323	0/0:6,0:6:15.01:0,15,173	1/1:0,7:7:18.06:234,18,0	0/0:11,0:11:33.11:0,33,494	0/0:25,0:25:75.23:0,75,1100	0/0:15,0:15:45.15:0,45,656	0/0:6,0:6:17.99:0,18,233	1/1:0,16:16:42.10:503,42,0	1/1:0,3:3:9.03:117,9,0	0/0:8,0:8:21.07:0,21,314	1/1:0,7:7:18.06:234,18,0	1/1:0,6:6:12.01:156,12,0	0/0:5,0:5:15.05:0,15,225	0/0:7,0:7:21.07:0,21,314	1/1:0,24:24:66.21:856,66,0	0/0:31,0:31:93.31:0,93,1389	0/0:13,0:13:36.11:0,36,518	0/0:8,0:8:18.06:0,18,269	0/0:22,0:22:63.21:0,63,941	0/0:4,0:4:12.04:0,12,180	1/1:0,4:4:12.04:155,12,0	1/1:1,14:15:42.14:545,42,0	0/0:6,0:6:18.06:0,18,270	1/1:0,21:21:63.17:774,63,0	1/1:0,6:6:12.04:156,12,0	1/1:0,5:5:12.04:156,12,0
chr10	18101361	.	A	AT	7825.25	PASS	AB=1.000;AC=51;AF=0.911;AN=56;BaseQRankSum=-4.024;DP=400;FS=3.226;HRun=2;HaplotypeScore=61.1321;InbreedingCoeff=0.5804;MQ=80.23;MQ0=0;MQRankSum=-2.852;QD=22.17;ReadPosRankSum=2.894;VQSLOD=4.9158;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:9,26:35:45.59:628,46,0	1/1:2,10:11:27.98:385,28,0	0/0:25,0:18:8.14:0,8,181	0/1:15,0:11:38.63:39,0,71	1/1:1,8:10:20.83:225,21,0	1/1:0,12:12:33:427,33,0	1/1:4,11:15:22.88:282,23,0	1/1:16,0:16:39.88:338,40,0	0/0:22,0:22:57.93:0,58,580	1/1:1,11:12:36.06:394,36,0	1/1:2,6:8:21.07:280,21,0	1/1:3,8:11:17.09:209,17,0	1/1:3,13:16:25.33:334,25,0	1/1:6,11:17:32.01:362,32,0	1/1:3,7:10:14.53:170,15,0	1/1:0,8:8:12.04:163,12,0	1/1:8,21:29:61.03:729,61,0	1/1:4,26:30:61.08:819,61,0	1/1:14,0:14:35.18:306,35,0	1/1:2,0:2:2.98:27,3,0	1/1:4,0:4:7.49:46,7,0	1/1:1,12:13:22.98:235,23,0	1/1:2,4:6:6.02:85,6,0	1/1:2,13:15:19.88:260,20,0	1/1:1,11:12:20.55:246,21,0	1/1:13,9:22:52.98:583,53,0	1/1:1,6:7:12.04:169,12,0	1/1:0,2:2:6.02:85,6,0
chr10	18101363	.	T	TTA	6031.53	PASS	AB=0.953;AC=49;AF=0.875;AN=56;BaseQRankSum=-2.343;DP=438;FS=8.646;HRun=0;HaplotypeScore=83.9600;InbreedingCoeff=0.3797;MQ=77.32;MQ0=1;MQRankSum=-1.797;QD=15.63;ReadPosRankSum=3.265;VQSLOD=4.2383;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:33,3:36:41.88:483,42,0	1/1:12,0:11:24.46:218,24,0	0/0:25,0:17:14.09:0,14,234	0/1:15,0:11:51.88:52,0,89	1/1:10,0:10:6.33:137,6,0	1/1:13,0:13:18.88:230,19,0	1/1:12,2:14:20.34:236,20,0	1/1:6,1:27:74.55:673,75,0	0/0:22,0:24:39.45:0,39,659	1/1:12,1:13:35.55:312,36,0	1/1:7,2:9:20.99:240,21,0	1/1:11,1:12:0.37:139,0,0	1/1:17,0:17:10.04:188,10,0	1/1:14,2:17:30.82:288,31,0	0/1:10,1:11:0.86:119,0,1	1/1:8,0:8:11.99:110,12,0	1/1:32,1:35:39.66:437,40,0	1/1:29,2:31:57.78:577,58,0	1/1:5,8:18:47.09:506,47,0	1/1:2,0:2:5.99:50,6,0	1/1:2,0:4:8.93:67,9,0	1/1:12,0:12:4.59:136,5,0	0/1:7,0:7:7.78:41,0,8	1/1:17,0:17:4.81:131,5,0	1/1:12,0:12:19.22:150,19,0	1/1:24,0:24:24.88:364,25,0	1/1:7,0:7:11.98:98,12,0	1/1:2,0:2:5.99:49,6,0
chr10	18106255	.	C	CT	4522.36	PASS	AB=0.758;AC=25;AF=0.446;AN=56;BaseQRankSum=-8.986;DP=520;FS=0.391;HRun=12;HaplotypeScore=76.6094;InbreedingCoeff=0.7821;MQ=63.02;MQ0=0;MQRankSum=-0.238;QD=16.81;ReadPosRankSum=-1.898;VQSLOD=5.1564;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,17:25:57.06:542,57,0	0/1:2,4:7:29.44:97,0,29	0/1:13,0:11:2.50:3,0,51	0/0:10,1:9:4.44:0,4,32	0/1:9,12:21:0.77:304,0,1	0/0:2,0:19:28.51:0,29,82	0/0:4,0:16:22.38:0,22,65	0/0:24,0:24:32.67:0,33,238	0/0:7,0:21:28.48:0,28,82	1/1:8,17:25:54.97:527,55,0	1/1:6,12:18:30.05:292,30,0	0/0:3,0:17:24.43:0,24,71	1/1:2,17:19:42.06:404,42,0	1/1:9,10:19:36.03:340,36,0	0/0:4,0:16:24.44:0,24,71	0/0:2,0:10:17.71:0,18,64	1/1:17,19:36:0.36:480,0,0	0/0:3,0:19:32.58:0,33,94	0/0:22,0:23:44.24:0,44,324	0/0:13,0:13:14.12:0,14,98	0/0:26,0:26:44.66:0,45,328	0/0:3,0:16:24.42:0,24,71	1/1:8,10:18:36.51:341,37,0	1/1:2,17:20:29.20:310,29,0	0/0:3,0:20:30.32:0,30,88	1/1:7,13:20:26.16:412,26,0	1/1:9,8:17:24.54:254,25,0	1/1:6,5:11:24.01:218,24,0
chr10	18106322	.	C	CTT	11527.49	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-0.766;DP=514;FS=6.370;HRun=10;HaplotypeScore=112.3063;InbreedingCoeff=0.8904;MQ=64.45;MQ0=0;MQRankSum=-3.070;QD=24.42;ReadPosRankSum=-0.426;VQSLOD=4.1066;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:9,18:28:74.31:923,74,0	1/1:1,8:9:27.08:384,27,0	0/0:14,0:14:23.53:0,24,195	0/0:9,0:9:1.04:0,1,81	1/1:5,20:30:71.02:844,71,0	1/1:17,0:24:63.70:546,64,0	1/1:11,0:15:29.43:231,29,0	1/1:3,1:34:53.83:449,54,0	0/0:17,0:18:41.76:0,42,408	1/1:9,13:23:62.57:767,63,0	1/1:3,14:19:18.16:623,18,0	1/1:7,0:11:24.37:206,24,0	1/1:7,6:14:28.70:354,29,0	1/1:2,15:18:32.51:428,33,0	1/1:13,0:26:65.87:567,66,0	1/1:7,0:11:25.99:212,26,0	1/1:5,20:29:62.69:870,63,0	1/1:11,0:13:29.84:220,30,0	1/1:1,0:18:37.62:325,38,0	1/1:1,2:15:32.82:258,33,0	1/1:6,0:6:13.43:89,13,0	1/1:7,0:13:26.15:224,26,0	1/1:6,12:19:42.05:522,42,0	1/1:7,9:17:14.58:506,15,0	1/1:14,0:24:46.16:395,46,0	1/1:2,20:27:70.11:815,70,0	1/1:1,13:17:35.05:430,35,0	1/1:2,8:11:22.40:338,22,0
chr10	18106563	.	T	TGA	1346.23	PASS	AB=0.983;AC=39;AF=0.813;AN=48;BaseQRankSum=-1.072;DP=541;FS=6.842;HRun=0;HaplotypeScore=91.0158;InbreedingCoeff=0.1838;MQ=69.95;MQ0=16;MQRankSum=-0.524;QD=3.07;ReadPosRankSum=-0.657;VQSLOD=1.1850;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:15:8.95:84,9,0	./.	./.	0/1:48,0:16:0:0,0,0	1/1:17,0:17:3.01:41,3,0	1/1:18,0:18:8.97:83,9,0	1/1:19,0:19:3.48:37,3,0	0/1:30,0:30:0:0,0,0	0/0:20,0:26:11.36:0,11,56	1/1:27,0:27:16.73:181,17,0	1/1:12,0:11:3.01:39,3,0	1/1:14,0:16:2.82:26,3,0	1/1:13,0:13:9:92,9,0	0/0:17,0:17:2.98:0,3,23	1/1:14,5:19:5.43:67,5,0	1/1:21,0:21:6.01:61,6,0	1/1:20,0:20:9.85:135,10,0	1/1:24,0:24:9.90:88,10,0	1/1:18,0:17:12.32:82,12,0	./.	1/1:13,0:13:2.99:24,3,0	1/1:15,0:15:2.99:24,3,0	./.	0/1:30,1:32:41.40:239,0,41	1/1:12,0:12:2.99:24,3,0	0/1:20,0:20:12.28:77,0,12	0/1:16,1:18:5.20:56,0,5	1/1:12,0:12:1.72:4,2,0
chr10	18107258	.	GGGGA	G	7705.95	PASS	AB=1.000;AC=51;AF=0.911;AN=56;BaseQRankSum=-1.744;DP=497;FS=15.210;HRun=0;HaplotypeScore=110.6102;InbreedingCoeff=0.6542;MQ=73.42;MQ0=1;MQRankSum=-3.231;QD=16.43;ReadPosRankSum=2.566;VQSLOD=3.6653;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:35,0:35:60.27:563,60,0	1/1:16,0:16:14.94:82,15,0	0/0:13,0:12:24.03:0,24,405	0/0:15,0:14:35.02:0,35,543	1/1:19,0:19:29.29:173,29,0	1/1:4,21:24:38.87:660,39,0	1/1:4,12:16:45.13:693,45,0	1/1:21,0:21:12.87:258,13,0	0/1:20,0:20:2.13:2,0,8	1/1:25,0:24:1.89:218,2,0	1/1:8,0:8:14.29:96,14,0	1/1:2,18:20:42.09:682,42,0	1/1:12,0:12:19.71:111,20,0	1/1:14,0:14:10.45:55,10,0	1/1:4,22:26:60.19:970,60,0	1/1:2,20:22:29.96:479,30,0	1/1:21,0:21:23.49:110,23,0	1/1:2,13:15:21.07:356,21,0	1/1:17,0:17:15.32:178,15,0	1/1:11,1:12:19.78:115,20,0	1/1:11,1:12:20.71:199,21,0	1/1:3,17:20:39.07:630,39,0	1/1:17,0:17:0.18:27,0,0	1/1:19,0:19:10.15:66,10,0	1/1:2,19:21:42.13:694,42,0	1/1:12,0:12:28.60:181,29,0	1/1:20,0:20:11.17:63,11,0	1/1:4,0:4:6.93:45,7,0
chr10	18107259	.	GGGA	G	7844.99	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=0.524;DP=490;FS=8.113;HRun=0;HaplotypeScore=102.4087;InbreedingCoeff=0.9555;MQ=73.69;MQ0=1;MQRankSum=-5.450;QD=16.98;ReadPosRankSum=3.512;VQSLOD=4.0921;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,29:34:75.25:1113,75,0	1/1:14,1:15:17.73:156,18,0	0/0:13,0:12:23.47:0,23,304	0/0:15,0:14:32.27:0,32,442	1/1:19,1:20:38.02:274,38,0	1/1:24,0:23:38.73:340,39,0	1/1:17,0:17:47.99:417,48,0	1/1:4,15:19:44.75:406,45,0	1/1:19,1:20:19.29:123,19,0	1/1:24,0:23:55.70:397,56,0	1/1:6,2:8:17.90:182,18,0	1/1:19,1:20:41.96:362,42,0	1/1:12,0:12:26.61:204,27,0	1/1:14,0:14:17.55:122,18,0	1/1:26,0:26:59.96:517,60,0	1/1:22,0:22:29.69:257,30,0	1/1:21,0:21:49.45:337,49,0	1/1:14,0:14:21:184,21,0	1/1:11,5:16:44.62:452,45,0	1/1:2,10:12:20.60:211,21,0	1/1:6,4:10:20.97:207,21,0	1/1:18,0:18:38.95:334,39,0	1/1:17,0:17:27.17:149,27,0	1/1:19,1:20:20.35:168,20,0	1/1:20,0:20:41.99:368,42,0	1/1:14,0:14:35.27:271,35,0	1/1:20,1:21:26.07:187,26,0	1/1:3,1:4:11.74:106,12,0
chr10	18107260	.	GGA	G	8182.59	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=0.993;DP=475;FS=4.626;HRun=0;HaplotypeScore=91.4245;InbreedingCoeff=0.9505;MQ=73.41;MQ0=1;MQRankSum=-4.828;QD=18.26;ReadPosRankSum=3.923;VQSLOD=4.4218;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:33,0:33:74.18:533,74,0	1/1:3,11:14:17.52:211,18,0	0/0:12,0:11:20.97:0,21,258	0/0:14,0:14:14.79:0,15,380	1/1:2,18:20:38.55:377,39,0	1/1:22,0:21:38.31:264,38,0	1/1:18,0:18:50.60:373,51,0	1/1:18,0:18:38.99:314,39,0	1/1:1,19:20:21.03:252,21,0	1/1:1,22:23:62.80:651,63,0	1/1:6,3:9:20.97:212,21,0	1/1:19,0:19:41.54:286,42,0	1/1:1,11:12:27.05:335,27,0	1/1:0,14:14:18.01:224,18,0	1/1:23,0:25:59.26:400,59,0	1/1:20,0:20:29.65:204,30,0	1/1:0,20:20:51.17:697,51,0	1/1:14,0:14:20.77:143,21,0	1/1:15,1:16:40.28:347,40,0	1/1:12,0:12:20.45:142,20,0	1/1:10,0:10:20.86:159,21,0	1/1:17,0:17:38.57:264,39,0	1/1:1,14:15:29.69:381,30,0	1/1:2,18:20:21.04:268,21,0	1/1:20,0:20:41.55:286,42,0	1/1:0,14:14:35.33:365,35,0	1/1:1,18:19:27.06:349,27,0	1/1:2,2:4:12.01:145,12,0
chr10	18107261	.	GA	G	5415.68	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=1.600;DP=477;FS=9.771;HRun=1;HaplotypeScore=95.4615;InbreedingCoeff=0.9571;MQ=74.23;MQ0=1;MQRankSum=-6.075;QD=12.06;ReadPosRankSum=3.431;VQSLOD=2.7079;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:32,0:33:71.19:386,71,0	1/1:12,2:14:17.40:118,17,0	0/0:12,0:11:23.94:0,24,249	0/0:16,0:15:26.40:0,26,338	1/1:19,1:20:38.14:240,38,0	1/1:22,0:21:37:187,37,0	1/1:19,0:19:52.17:326,52,0	1/1:15,0:16:34.14:290,34,0	1/1:20,0:20:20.68:138,21,0	1/1:23,0:23:61.48:414,61,0	1/1:9,0:9:20.65:135,21,0	1/1:19,0:19:39.97:208,40,0	1/1:11,1:12:26.68:182,27,0	1/1:14,0:14:17.74:115,18,0	1/1:24,0:25:56.56:282,57,0	1/1:20,0:20:28.51:150,29,0	1/1:20,0:20:50.25:326,50,0	1/1:13,0:14:19.89:101,20,0	1/1:18,0:18:48.55:338,49,0	1/1:12,0:12:20.54:125,21,0	1/1:10,0:10:20.52:144,21,0	1/1:17,0:17:37.08:192,37,0	1/1:14,1:15:29.40:185,29,0	1/1:19,1:20:20.65:132,21,0	1/1:20,0:20:39.80:202,40,0	1/1:14,0:14:35.67:257,36,0	1/1:19,0:19:26.31:168,26,0	1/1:3,1:4:11.77:74,12,0
chr10	18108382	.	GT	G	10054.36	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=10.676;DP=608;FS=3.514;HRun=2;HaplotypeScore=100.5122;InbreedingCoeff=0.9992;MQ=90.16;MQ0=0;MQRankSum=-1.007;QD=38.38;ReadPosRankSum=1.457;VQSLOD=5.0492;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:99:0,99,1572	0/0:10,0:10:30.10:0,30,479	0/0:19,0:19:57.19:0,57,911	0/0:30,0:29:84.25:0,84,1285	0/0:29,0:29:87.30:0,87,1388	1/1:0,17:17:48.16:671,48,0	1/1:0,32:32:87.29:1217,87,0	1/1:0,21:21:63.21:881,63,0	0/0:21,0:21:60.20:0,60,959	0/0:18,0:18:48.12:0,48,721	0/0:19,0:19:57.18:0,57,864	1/1:0,25:25:69.23:960,69,0	0/0:30,0:30:90.29:0,90,1412	0/0:18,0:18:51.17:0,51,812	1/1:0,25:25:72.24:1007,72,0	1/1:0,18:18:45.15:629,45,0	0/0:30,0:30:90.29:0,90,1408	1/1:0,18:18:51.17:709,51,0	1/1:0,7:7:21.07:294,21,0	1/1:0,15:15:42.14:582,42,0	1/1:0,47:47:99:1720,123,0	1/1:0,16:16:45.15:628,45,0	0/0:13,0:13:39.13:0,39,623	0/0:24,0:24:69.24:0,69,1093	1/1:0,21:21:54.18:755,54,0	0/0:22,0:22:66.23:0,66,1054	0/0:21,0:21:63.20:0,63,984	0/0:9,0:9:27.09:0,27,432
chr10	18110311	.	A	AG	626.81	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-1.078;DP=660;FS=0.000;HRun=7;HaplotypeScore=80.1944;InbreedingCoeff=0.9972;MQ=88.36;MQ0=1;MQRankSum=-2.504;QD=28.49;ReadPosRankSum=0.369;VQSLOD=4.0346;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,99,956	0/0:9,0:9:24.04:0,24,231	0/0:36,0:36:98.64:0,99,931	0/0:26,0:26:29.09:0,29,443	0/0:20,0:20:51.08:0,51,492	0/0:21,0:20:54.08:0,54,521	0/0:25,0:25:66.07:0,66,625	0/0:21,0:21:57.09:0,57,550	1/1:2,20:22:60.18:722,60,0	0/0:25,0:25:66.10:0,66,634	0/0:16,0:16:42.06:0,42,405	0/0:26,0:26:57.01:0,57,533	0/0:24,0:24:60.07:0,60,572	0/0:32,0:32:96.14:0,96,919	0/0:27,0:27:72.06:0,72,677	0/0:31,0:31:84.13:0,84,810	0/0:36,0:36:99:0,102,979	0/0:20,0:20:51.02:0,51,483	0/0:20,0:20:51.04:0,51,478	0/0:18,0:18:54.08:0,54,516	0/0:17,0:17:48.07:0,48,463	0/0:17,0:17:48.06:0,48,457	0/0:21,0:21:57.09:0,57,550	0/0:22,0:22:60.09:0,60,579	0/0:18,0:18:45.06:0,45,434	0/0:23,0:23:66.11:0,66,637	0/0:32,0:32:93.13:0,93,892	0/0:14,0:14:39.04:0,39,370
chr10	18112092	.	T	TC	419.58	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-2.625;DP=604;FS=3.365;HRun=8;HaplotypeScore=58.8846;InbreedingCoeff=0.8434;MQ=72.26;MQ0=0;MQRankSum=-1.429;QD=19.98;ReadPosRankSum=1.410;VQSLOD=3.8008;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,105,958	0/0:6,0:6:9:0,9,82	0/0:8,0:8:12.19:0,12,108	0/0:11,0:11:20.90:0,21,165	0/0:18,0:18:14.78:0,15,298	0/0:22,0:22:66.04:0,66,604	0/0:38,1:39:70.44:0,70,899	0/0:21,0:21:29.99:0,30,275	1/1:5,16:21:45.13:514,45,0	0/0:21,0:21:57.03:0,57,521	0/0:6,0:6:14.98:0,15,131	0/0:20,0:20:50.98:0,51,456	0/0:27,0:27:63.02:0,63,576	0/0:21,0:21:53.99:0,54,487	0/0:22,0:22:60.02:0,60,549	0/0:26,0:26:69:0,69,625	0/0:33,0:33:84.04:0,84,769	0/0:32,0:32:87.03:0,87,795	0/0:19,0:19:47.97:0,48,428	0/0:19,0:19:48.02:0,48,439	0/0:29,0:29:75.01:0,75,680	0/0:18,0:18:45:0,45,407	0/0:13,0:13:36:0,36,325	0/0:33,0:33:84.04:0,84,768	0/0:19,0:19:42:0,42,384	0/0:25,0:25:57.02:0,57,521	0/0:21,0:21:57:0,57,512	0/0:4,0:4:9:0,9,82
chr10	18112729	.	AGT	A	13869.01	PASS	AB=0.522;AC=25;AF=0.446;AN=56;BaseQRankSum=16.182;DP=743;FS=1.525;HRun=0;HaplotypeScore=92.8807;InbreedingCoeff=0.9270;MQ=87.23;MQ0=1;MQRankSum=-2.471;QD=39.97;ReadPosRankSum=3.787;VQSLOD=6.4802;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,28:29:81.27:1193,81,0	0/1:1,11:12:23.11:386,0,23	0/0:22,0:22:60.21:0,60,1111	0/0:30,0:30:84.29:0,84,1552	1/1:0,30:30:84.28:1237,84,0	0/0:27,0:27:81.28:0,81,1510	0/0:23,0:23:69.24:0,69,1285	0/0:17,0:17:48.16:0,48,853	0/0:28,0:28:81.27:0,81,1479	1/1:4,38:42:99:1659,114,0	1/1:0,20:20:54.18:795,54,0	0/0:31,0:31:90.31:0,90,1663	1/1:1,25:26:66.22:972,66,0	1/1:1,32:32:93.31:1370,93,0	0/0:31,0:31:93.32:0,93,1742	0/0:31,0:31:90.31:0,90,1684	1/1:0,38:38:99:1546,105,0	0/0:29,0:29:81.28:0,81,1499	0/0:28,0:28:81.27:0,81,1486	0/0:17,0:17:51.17:0,51,955	0/0:39,0:39:99:0,114,2111	0/0:20,0:20:60.18:0,60,1034	1/1:0,21:21:60.20:884,60,0	1/1:0,32:32:87.29:1281,87,0	0/0:23,0:23:60.21:0,60,1124	1/1:1,31:32:93.26:1309,93,0	1/1:0,24:24:66.22:972,66,0	1/1:1,7:8:18.06:265,18,0
chr10	18113569	.	GGA	G	3495.76	PASS	AC=28;AF=0.519;AN=54;BaseQRankSum=7.911;DP=367;FS=4.683;HRun=0;HaplotypeScore=51.2787;InbreedingCoeff=0.9545;MQ=64.16;MQ0=11;MQRankSum=-0.240;QD=27.97;ReadPosRankSum=2.204;VQSLOD=4.7293;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,13:15:18.06:232,18,0	1/1:0,5:5:8.82:116,9,0	0/0:42,0:18:28.79:0,29,375	0/0:65,0:16:20.11:0,20,192	1/1:0,6:6:18.06:232,18,0	0/0:9,0:9:21.07:0,21,354	0/0:12,0:12:36.12:0,36,601	0/0:21,0:21:46.69:0,47,697	1/1:1,5:6:15.05:193,15,0	1/1:2,12:14:36.12:463,36,0	1/1:3,6:9:15.05:193,15,0	0/0:10,0:10:30.10:0,30,506	1/1:0,7:7:18.06:231,18,0	1/1:1,10:11:21.07:270,21,0	0/0:10,0:10:27.09:0,27,442	0/0:10,0:10:27.09:0,27,455	1/1:0,6:6:18.06:231,18,0	./.	0/0:13,0:13:27.08:0,27,400	0/0:11,0:11:24.08:0,24,405	0/0:15,0:15:39.09:0,39,627	0/0:4,0:4:6.02:0,6,101	1/1:0,10:10:11.86:154,12,0	1/1:0,7:7:18.06:232,18,0	0/0:18,0:18:45.15:0,45,736	1/1:1,10:11:30.08:371,30,0	1/1:2,12:13:33.11:425,33,0	1/1:0,4:4:12.04:154,12,0
chr10	18117462	.	T	TGGTCGTGCCTGG	69808.01	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-6.266;DP=752;FS=3.972;HRun=0;HaplotypeScore=192.9556;InbreedingCoeff=0.9888;MQ=72.99;MQ0=0;MQRankSum=-10.350;QD=98.74;ReadPosRankSum=6.114;VQSLOD=4.2437;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,21:44:81.19:4679,81,0	1/1:1,5:11:18.06:1091,18,0	0/0:22,0:22:66.20:0,66,2013	0/0:23,0:23:47.27:0,47,1465	1/1:3,7:20:29.96:1335,30,0	1/1:8,11:24:48.16:2858,48,0	1/1:9,15:34:66.23:3720,66,0	1/1:12,6:27:69.23:3112,69,0	1/1:8,11:26:51.18:2841,51,0	1/1:12,11:37:81.67:3574,82,0	1/1:3,5:16:18.06:1081,18,0	1/1:8,16:37:60.21:3398,60,0	1/1:9,17:31:81.28:4627,81,0	1/1:12,12:35:57.20:3186,57,0	1/1:9,18:39:60.21:3541,60,0	1/1:9,18:33:78.27:4599,78,0	1/1:9,13:31:54.19:3013,54,0	1/1:9,5:16:30.10:1458,30,0	1/1:8,8:29:78.07:3341,78,0	1/1:5,8:24:33.07:1742,33,0	1/1:14,5:30:24.07:1452,24,0	1/1:7,9:29:30.09:1768,30,0	1/1:8,10:25:33.11:1927,33,0	1/1:8,7:21:30.10:1820,30,0	1/1:4,9:20:33.11:1871,33,0	1/1:1,9:25:72.16:2956,72,0	1/1:7,15:33:53.99:3199,54,0	1/1:2,6:10:27.09:1620,27,0
chr10	18121599	.	A	AAAAAC	12365.93	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-7.371;DP=780;FS=3.219;HRun=0;HaplotypeScore=167.2857;InbreedingCoeff=0.9799;MQ=64.51;MQ0=0;MQRankSum=-7.646;QD=34.93;ReadPosRankSum=-1.073;VQSLOD=4.2760;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:45.13:0,45,782	1/1:8,12:20:39.13:1074,39,0	0/0:28,0:24:20.56:0,21,205	0/0:23,0:13:5.62:0,6,80	1/1:18,15:33:44.96:1051,45,0	0/0:13,0:13:30.10:0,30,538	0/0:18,0:18:33.09:0,33,531	0/0:25,0:25:17.28:0,17,312	0/0:24,0:24:48.14:0,48,805	1/1:14,23:40:78.20:1739,78,0	1/1:13,9:23:24.08:659,24,0	0/0:39,0:39:72.20:0,72,1170	1/1:13,19:35:39.13:1079,39,0	1/1:11,17:29:30.10:819,30,0	0/0:30,0:30:60.18:0,60,1048	0/0:25,0:25:60.20:0,60,1029	1/1:10,17:29:33.09:866,33,0	0/0:39,0:39:48.63:0,49,1040	0/0:20,0:20:33.10:0,33,542	0/0:38,0:38:60.16:0,60,945	0/0:22,0:22:20.19:0,20,632	0/0:29,0:29:63.19:0,63,1071	1/1:14,20:35:49.52:1285,50,0	1/1:10,13:23:27.09:757,27,0	0/0:25,0:25:60.21:0,60,1066	1/1:24,16:41:57.19:1355,57,0	1/1:17,19:37:42.14:1177,42,0	1/1:2,7:9:18.06:505,18,0
chr10	18123525	.	TCACACACA	T	2030.24	PASS	AB=0.754;AC=17;AF=0.327;AN=52;BaseQRankSum=1.463;DP=525;FS=3.382;HRun=0;HaplotypeScore=136.5886;InbreedingCoeff=0.6204;MQ=64.15;MQ0=20;MQRankSum=-4.480;QD=10.00;ReadPosRankSum=0.536;VQSLOD=2.7063;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:39:45.49:0,45,1152	0/0:8,0:8:18.06:0,18,494	./.	0/0:32,0:27:0.89:0,1,2	0/0:13,0:20:15.01:0,15,384	1/1:14,1:15:12.03:221,12,0	1/1:11,10:21:15.05:294,15,0	0/1:16,0:19:1.45:82,0,1	1/1:12,1:13:9.03:170,9,0	0/0:15,0:14:24.05:0,24,514	0/0:11,0:18:12.51:0,13,267	1/1:16,4:20:15.03:331,15,0	0/0:12,0:17:27.05:0,27,667	0/0:21,0:22:39.10:0,39,1146	1/1:11,11:21:14.73:369,15,0	0/1:8,10:17:7.41:356,0,7	0/0:22,0:27:37.63:0,38,797	0/1:16,5:20:75.29:148,0,75	0/0:6,0:4:2.70:0,3,7	./.	1/1:31,0:28:14.60:87,15,0	0/0:5,3:8:0:0,0,0	0/0:10,0:9:6.02:0,6,205	0/0:16,0:33:24.08:0,24,736	1/1:8,11:19:6.01:148,6,0	0/0:18,0:17:27.09:0,27,767	0/0:8,0:14:8.05:0,8,214	0/0:4,0:6:3.01:0,3,105
chr10	18124333	.	CAAGACTCAACAGAG	C	721.25	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.399;DP=745;FS=6.011;HRun=0;HaplotypeScore=274.3616;InbreedingCoeff=0.9938;MQ=79.11;MQ0=1;MQRankSum=-4.518;QD=32.78;ReadPosRankSum=-0.433;VQSLOD=1.8714;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:5,17:22:21.07:813,21,0	0/0:13,0:13:39.13:0,39,2537	0/0:15,0:15:45.15:0,45,1923	0/0:19,0:19:48.14:0,48,2351	0/0:25,0:25:70.11:0,70,3948	0/0:23,0:23:63.22:0,63,3711	0/0:35,0:35:99:0,105,6465	0/0:29,0:29:81.28:0,81,5015	0/0:30,0:30:84.29:0,84,5486	0/0:31,0:31:87.29:0,87,5112	0/0:13,0:13:39.12:0,39,2086	0/0:37,0:37:96.33:0,96,6065	0/0:32,0:32:93.32:0,93,5739	0/0:41,0:41:99:0,120,8001	0/0:33,0:33:96.33:0,96,6108	0/0:40,0:40:99:0,117,7447	0/0:38,0:38:99:0,111,7107	0/0:26,0:26:78.27:0,78,5147	0/0:25,0:25:69.23:0,69,3761	0/0:19,0:19:57.18:0,57,3172	0/0:51,0:50:99:0,144,9554	0/0:18,0:18:51.18:0,51,2988	0/0:15,0:15:42.14:0,42,2463	0/0:33,0:33:96.32:0,96,6381	0/0:19,0:19:51.18:0,51,3234	0/0:31,0:31:93.32:0,93,5277	0/0:24,0:23:72.25:0,72,4334	0/0:8,0:8:24.08:0,24,1327
chr10	18125081	.	TC	T	7575.01	PASS	AB=0.952;AC=53;AF=0.946;AN=56;BaseQRankSum=-2.770;DP=591;FS=13.869;HRun=9;HaplotypeScore=89.3615;InbreedingCoeff=0.8265;MQ=73.37;MQ0=2;MQRankSum=-6.119;QD=13.20;ReadPosRankSum=6.314;VQSLOD=2.9694;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,0:24:30.55:90,31,0	1/1:1,0:11:20.37:60,20,0	0/0:17,0:16:41.56:0,42,443	0/1:19,1:19:0.30:0,0,262	1/1:3,0:29:46.63:136,47,0	1/1:4,25:29:63.03:576,63,0	1/1:3,15:18:45.02:412,45,0	1/1:7,32:39:95.99:862,96,0	1/1:0,20:19:54.03:494,54,0	1/1:2,0:17:26.40:80,26,0	1/1:2,0:22:32.11:94,32,0	1/1:2,19:21:48.02:439,48,0	1/1:3,0:18:30.55:89,31,0	1/1:3,0:30:51.87:166,52,0	1/1:0,16:16:45.02:412,45,0	1/1:2,23:25:66.04:604,66,0	1/1:3,0:24:38.70:114,39,0	1/1:3,12:15:27.01:247,27,0	1/1:5,14:19:45.02:411,45,0	1/1:1,20:22:56.06:500,56,0	1/1:1,16:17:36.02:330,36,0	1/1:4,20:24:57.03:521,57,0	1/1:4,0:21:32.59:95,33,0	1/1:2,1:17:27.44:99,27,0	1/1:2,21:23:57.03:521,57,0	1/1:7,0:22:25.80:79,26,0	1/1:1,0:21:34.63:102,35,0	1/1:1,0:9:14.26:42,14,0
chr10	18133813	.	GA	G	3668.54	PASS	AB=0.929;AC=30;AF=0.536;AN=56;BaseQRankSum=7.717;DP=435;FS=3.163;HRun=10;HaplotypeScore=48.4275;InbreedingCoeff=0.8756;MQ=65.15;MQ0=6;MQRankSum=0.644;QD=15.41;ReadPosRankSum=-0.123;VQSLOD=3.5971;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:25:55.11:314,55,0	0/0:9,0:9:18.05:0,18,199	0/1:11,0:8:0.66:1,0,71	0/1:5,1:2:8.11:8,0,9	0/0:27,0:26:25.54:0,26,496	1/1:3,11:14:26.99:234,27,0	1/1:7,9:15:23.99:208,24,0	1/1:2,20:23:55.98:467,56,0	1/1:7,0:7:20.13:119,20,0	0/0:16,0:16:30.08:0,30,332	0/0:16,0:16:30.08:0,30,332	1/1:1,8:9:17.99:156,18,0	0/0:17,1:18:13.04:0,13,356	0/0:11,0:11:27.07:0,27,297	1/1:2,18:20:38.98:339,39,0	1/1:2,13:15:23.03:188,23,0	0/0:31,1:32:48.57:0,49,717	1/1:4,16:20:35.24:424,35,0	1/1:5,17:21:20.78:404,21,0	1/1:6,8:14:23.98:208,24,0	1/1:2,6:7:15:130,15,0	1/1:1,5:6:12:104,12,0	0/0:7,0:6:6.01:0,6,59	0/0:12,0:12:27.06:0,27,292	1/1:0,22:22:41.99:365,42,0	0/0:20,0:19:30.08:0,30,332	0/0:18,1:19:22.07:0,22,471	0/0:10,0:10:21.06:0,21,232
chr10	18134594	.	GA	G	6033.27	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=15.431;DP=584;FS=5.624;HRun=9;HaplotypeScore=60.3405;InbreedingCoeff=0.9904;MQ=71.81;MQ0=0;MQRankSum=-1.264;QD=23.66;ReadPosRankSum=2.196;VQSLOD=5.8719;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,124,1388	1/1:0,9:9:27.01:247,27,0	0/0:12,0:12:14.17:0,14,192	0/0:4,0:4:12.03:0,12,136	1/1:3,29:32:62.75:695,63,0	0/0:21,0:21:63.16:0,63,708	0/0:16,0:16:45.13:0,45,519	0/0:44,0:44:99:0,119,1347	0/0:6,0:6:15.04:0,15,173	1/1:3,22:25:69.04:631,69,0	1/1:1,19:20:57.03:521,57,0	0/0:23,0:23:63.17:0,63,717	1/1:1,12:13:36.02:329,36,0	1/1:2,20:22:28.41:514,28,0	0/0:25,0:25:63.18:0,63,718	0/0:12,0:12:36.11:0,36,416	1/1:1,22:23:54.03:494,54,0	0/0:11,0:11:33.10:0,33,381	0/0:18,0:18:48.14:0,48,554	0/0:36,0:36:99:0,104,1157	0/0:11,0:11:33.10:0,33,381	0/0:19,0:19:54.15:0,54,612	1/1:2,16:18:48.02:438,48,0	1/1:0,15:15:39.02:357,39,0	0/0:26,0:26:72.21:0,72,831	1/1:5,31:36:93.03:846,93,0	1/1:2,21:23:56.88:521,57,0	1/1:2,17:19:47.76:439,48,0
chr10	18140639	.	C	CT	1782.12	PASS	AB=0.664;AC=26;AF=0.464;AN=56;BaseQRankSum=-6.623;DP=598;FS=1.058;HRun=15;HaplotypeScore=94.8957;InbreedingCoeff=0.4472;MQ=69.88;MQ0=1;MQRankSum=0.375;QD=4.94;ReadPosRankSum=-4.639;VQSLOD=1.0229;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,1:24:5.82:0,6,141	1/1:5,3:8:14.86:110,15,0	0/0:18,0:16:16.82:0,17,85	0/0:7,0:7:2.27:0,2,8	0/1:9,13:26:0.68:193,0,1	0/0:5,0:15:16.21:0,16,47	0/0:6,0:20:27.32:0,27,88	1/1:18,13:32:1.02:204,1,0	0/0:15,0:15:13.63:0,14,88	0/1:15,14:31:7.04:138,0,7	0/1:10,11:21:25.43:119,0,25	0/0:5,0:19:16.22:0,16,47	0/1:13,16:29:27.22:108,0,27	1/1:9,12:22:11.83:90,12,0	0/0:12,0:37:35.37:0,35,112	0/0:7,0:24:28.41:0,28,82	1/1:5,20:25:2.96:133,3,0	0/0:3,0:17:18.20:0,18,53	0/1:17,0:24:42.42:83,0,42	1/1:11,23:34:12.16:171,12,0	1/1:7,10:17:11.70:98,12,0	0/0:5,0:12:8.96:0,9,35	1/1:11,6:18:13.58:90,14,0	1/1:1,11:13:5.16:70,5,0	0/0:9,0:28:21.02:0,21,60	1/1:13,12:27:26.78:210,27,0	0/1:10,16:26:12.02:127,0,12	1/1:4,4:8:3:25,3,0
chr10	18141231	.	AG	A	2654.22	PASS	AB=0.849;AC=27;AF=0.482;AN=56;BaseQRankSum=1.977;DP=344;FS=25.132;HRun=7;HaplotypeScore=78.6055;InbreedingCoeff=0.7822;MQ=76.49;MQ0=0;MQRankSum=-1.243;QD=13.75;ReadPosRankSum=-2.424;VQSLOD=1.2285;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:7,4:11:0.02:147,0,0	0/0:2,0:2:5.98:0,6,58	0/1:18,0:14:11.45:11,0,121	0/0:13,0:12:27.05:0,27,322	0/0:14,0:14:36.11:0,36,446	1/1:4,13:17:36.07:364,36,0	1/1:6,6:12:31.57:243,32,0	0/1:10,3:13:22.40:82,0,22	1/1:4,6:10:21.01:202,21,0	0/0:13,0:13:27.09:0,27,339	0/0:12,0:12:30.09:0,30,365	1/1:6,3:9:11.14:104,11,0	0/0:8,0:8:21.07:0,21,259	0/0:7,0:7:21.07:0,21,264	1/1:16,5:21:26.30:168,26,0	1/1:8,7:15:36.32:318,36,0	0/0:17,0:17:39.12:0,39,491	1/1:8,14:22:32.43:330,32,0	1/1:2,9:11:27.06:274,27,0	1/1:4,6:10:17.79:182,18,0	1/1:1,5:6:12.03:122,12,0	1/1:5,1:6:5.60:41,6,0	0/0:9,0:9:27.09:0,27,338	0/0:12,0:12:30.09:0,30,373	1/1:3,9:12:29.10:282,29,0	0/0:19,0:19:45.13:0,45,552	0/0:19,0:19:57.14:0,57,697	0/0:6,0:6:18.05:0,18,220
chr10	18141260	.	CA	C	2192.69	PASS	AB=0.987;AC=40;AF=0.714;AN=56;BaseQRankSum=-0.042;DP=377;FS=137.655;HRun=4;HaplotypeScore=101.7446;InbreedingCoeff=0.0934;MQ=53.53;MQ0=1;MQRankSum=11.619;QD=6.19;ReadPosRankSum=2.445;VQSLOD=-0.3440;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:14:28.95:184,29,0	0/1:3,0:3:6.16:17,0,6	0/0:5,2:4:8.84:0,9,68	0/0:6,2:4:4.30:0,4,16	1/1:21,1:22:39.65:194,40,0	0/1:19,1:20:0.10:66,0,0	0/1:14,0:14:11.49:11,0,25	0/1:30,3:33:32.76:140,0,33	0/1:6,0:6:4.35:16,0,4	1/1:12,0:12:28.47:158,28,0	1/1:16,0:16:26.64:157,27,0	1/1:8,0:8:3.76:64,4,0	0/1:11,0:11:8.04:155,0,8	1/1:9,0:9:17.62:57,18,0	0/1:14,0:14:31.21:31,0,32	0/1:16,0:16:6.65:64,0,7	1/1:16,0:16:34.15:143,34,0	1/1:18,0:18:27.44:107,27,0	1/1:21,0:21:4.70:57,5,0	1/1:11,0:11:20.52:105,21,0	0/1:8,0:8:4.67:20,0,5	0/0:8,0:8:5.42:0,5,40	1/1:8,0:8:17.29:62,17,0	1/1:9,0:9:15.69:60,16,0	0/1:20,0:20:17.96:59,0,18	1/1:22,0:22:35.56:297,36,0	1/1:19,0:19:17.88:112,18,0	1/1:4,0:4:2.12:11,2,0
chr10	18141291	.	T	TA	340.73	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.667;DP=434;FS=18.569;HRun=8;HaplotypeScore=97.3657;InbreedingCoeff=0.7766;MQ=61.43;MQ0=1;MQRankSum=0.886;QD=24.34;ReadPosRankSum=2.196;VQSLOD=2.3800;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,12:14:39.07:435,39,0	0/0:6,0:6:18.01:0,18,165	0/0:5,0:5:9:0,9,81	0/0:8,0:4:2.95:0,3,19	0/0:23,0:23:57:0,57,516	0/0:19,0:19:53.99:0,54,482	0/0:11,0:11:20.66:0,21,170	0/0:38,0:38:84.58:0,85,733	0/0:5,0:5:15.01:0,15,136	0/0:27,0:27:78.04:0,78,714	0/0:22,0:22:60.03:0,60,549	0/0:9,0:9:23.98:0,24,212	0/0:18,0:18:51.02:0,51,467	0/0:12,0:12:33.02:0,33,302	0/0:13,0:13:30.01:0,30,273	0/0:23,0:23:57.90:0,58,516	0/0:17,0:17:41.99:0,42,378	0/0:23,0:23:54.02:0,54,485	0/0:18,0:18:45.43:0,45,395	0/0:16,0:16:41.97:0,42,373	0/0:6,0:6:18:0,18,160	0/0:9,0:9:22.25:0,22,194	0/0:11,0:11:26.99:0,27,241	0/0:9,0:9:18:0,18,165	0/0:23,0:23:60.01:0,60,541	0/0:19,0:19:54.03:0,54,494	0/0:20,0:20:57.03:0,57,521	0/0:10,0:10:30.02:0,30,275
chr10	18142487	.	C	CCCCGTCTT	2093.29	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-0.893;DP=695;FS=6.954;HRun=0;HaplotypeScore=206.1308;InbreedingCoeff=0.8457;MQ=76.41;MQ0=0;MQRankSum=-7.488;QD=55.09;ReadPosRankSum=-2.168;VQSLOD=2.3511;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:20,15:38:69.58:2188,70,0	0/0:11,0:11:24.06:0,24,479	0/0:23,0:22:31.91:0,32,544	0/0:22,0:21:29.96:0,30,644	0/0:20,0:20:39.13:0,39,968	0/0:24,0:24:60.20:0,60,1389	0/0:24,0:24:52.39:0,52,1123	0/0:28,0:28:24.08:0,24,530	0/0:20,0:20:45.08:0,45,998	0/0:22,0:22:45.11:0,45,1104	0/0:11,0:11:27.09:0,27,698	0/0:40,0:40:84.27:0,84,1966	0/0:31,0:31:57.18:0,57,1363	0/0:26,0:26:72.23:0,72,1793	0/0:33,0:33:75.22:0,75,1748	0/0:22,0:22:63.20:0,63,1510	0/0:38,0:38:93.32:0,93,2408	0/0:31,0:31:81.28:0,81,2023	0/0:15,0:15:32.28:0,32,797	0/0:21,0:21:36.12:0,36,874	0/0:51,0:51:99:0,105,2219	0/0:20,0:20:39.10:0,39,823	0/0:17,0:17:30.09:0,30,688	0/0:32,0:31:72.25:0,72,1792	0/0:21,0:21:51.18:0,51,1250	0/0:26,0:26:57.20:0,57,1466	0/0:24,0:23:57.13:0,57,1227	0/0:4,0:4:3.01:0,3,78
chr10	18146667	.	G	GCAAACAAATGGA	41187.96	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-2.066;DP=704;FS=2.754;HRun=0;HaplotypeScore=222.8651;InbreedingCoeff=0.9954;MQ=66.51;MQ0=0;MQRankSum=-19.259;QD=120.43;ReadPosRankSum=-2.384;VQSLOD=4.6865;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:25,8:33:63.20:3118,63,0	0/0:12,0:12:33.11:0,33,1012	0/0:25,0:25:57.17:0,57,1696	0/0:21,0:20:42.06:0,42,1059	0/0:35,0:35:93.32:0,93,3354	1/1:5,12:17:42.14:2463,42,0	1/1:7,2:11:27.09:1381,27,0	1/1:23,4:29:57.19:2556,57,0	1/1:9,14:23:60.21:3519,60,0	0/0:43,0:43:99:0,117,3792	0/0:31,0:31:81.26:0,81,2542	1/1:12,16:28:78.27:4477,78,0	0/0:29,0:29:75.26:0,75,2612	0/0:17,0:17:42.14:0,42,1531	1/1:13,12:28:69.24:3684,69,0	1/1:20,9:28:78.27:3611,78,0	0/0:33,0:33:92.10:0,92,2988	1/1:13,0:13:25.44:1239,25,0	1/1:9,3:14:12.70:1271,13,0	1/1:25,12:38:99:4735,102,0	1/1:9,7:17:21.07:1104,21,0	1/1:8,20:29:75.26:4345,75,0	0/0:25,0:25:54.19:0,54,1915	0/0:17,0:17:48.15:0,48,1621	1/1:21,9:32:72.25:3686,72,0	0/0:35,0:35:99:0,99,3585	0/0:22,0:22:51.16:0,51,1630	0/0:17,0:17:51.17:0,51,1777
chr10	18146746	.	C	CT	6798.37	PASS	AB=0.748;AC=26;AF=0.464;AN=56;BaseQRankSum=-8.135;DP=604;FS=2.417;HRun=9;HaplotypeScore=65.9242;InbreedingCoeff=0.8656;MQ=58.60;MQ0=18;MQRankSum=-1.740;QD=22.51;ReadPosRankSum=-0.728;VQSLOD=5.3906;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,21:24:63.17:695,63,0	0/0:10,0:10:23.97:0,24,205	0/0:15,0:14:29.83:0,30,239	0/0:9,0:9:13.58:0,14,137	0/0:33,0:33:83.96:0,84,722	1/1:3,9:11:30.08:332,30,0	1/1:4,15:18:42.11:464,42,0	1/1:14,21:34:41.90:655,42,0	1/1:3,13:16:42.11:461,42,0	0/0:21,0:20:50.98:0,51,443	0/0:24,0:24:56.97:0,57,491	1/1:6,10:14:30.08:331,30,0	0/0:21,0:20:47.97:0,48,416	0/0:22,0:22:53.01:0,53,445	1/1:3,17:19:48.13:531,48,0	1/1:5,18:23:33.94:582,34,0	0/0:35,0:29:36.41:0,36,398	1/1:9,13:17:19.59:378,20,0	1/1:1,15:15:12.86:371,13,0	0/1:14,22:34:5.18:614,0,5	0/1:6,1:3:20.04:27,0,20	1/1:3,18:21:57.14:621,57,0	0/0:25,0:25:68.94:0,69,589	0/0:13,0:11:20.98:0,21,182	1/1:8,24:30:49.65:736,50,0	0/0:31,0:32:80.89:0,81,698	0/0:29,1:29:50.78:0,51,663	0/0:11,0:11:32.99:0,33,287
chr10	18148598	.	T	TAAACAAAC	10884.74	PASS	AB=0.696;AC=23;AF=0.411;AN=56;BaseQRankSum=-12.526;DP=752;FS=3.468;HRun=0;HaplotypeScore=158.2581;InbreedingCoeff=0.8939;MQ=65.41;MQ0=3;MQRankSum=-10.890;QD=35.23;ReadPosRankSum=-3.371;VQSLOD=4.2861;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:70.12:0,70,1217	0/0:15,0:15:27.06:0,27,597	0/0:32,0:27:28.90:0,29,314	0/0:28,0:24:35.27:0,35,549	0/0:34,0:34:93.19:0,93,1989	1/1:5,22:27:36.12:1481,36,0	1/1:10,10:20:15.05:626,15,0	1/1:37,0:36:58.20:610,58,0	0/0:24,0:23:51.17:0,51,885	0/0:40,0:40:95.64:0,96,2010	0/0:28,0:28:69.18:0,69,1559	1/1:7,14:23:18.06:756,18,0	0/0:22,0:22:51.15:0,51,1219	0/0:27,0:27:63.11:0,63,1341	1/1:6,19:28:27.09:1134,27,0	1/1:8,34:42:48.16:2015,48,0	0/0:26,0:26:60.11:0,60,1312	0/1:9,5:16:27.99:120,0,28	1/1:10,14:28:53.98:1464,54,0	1/1:9,20:31:44.96:1412,45,0	1/1:3,7:13:3.01:126,3,0	1/1:3,14:21:17.93:541,18,0	0/0:24,0:23:57.15:0,57,1248	0/0:22,0:22:45.08:0,45,928	1/1:6,15:23:15.05:599,15,0	0/0:37,0:37:90.21:0,90,1856	0/0:29,0:29:72.20:0,72,1592	0/0:16,0:16:42.06:0,42,876
chr10	18148612	.	AACAG	A	2208.63	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=4.890;DP=738;FS=11.063;HRun=0;HaplotypeScore=131.6591;InbreedingCoeff=0.9971;MQ=56.18;MQ0=3;MQRankSum=4.351;QD=35.62;ReadPosRankSum=4.788;VQSLOD=3.5218;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,37:37:72.25:1364,72,0	0/0:13,0:13:39.02:0,39,798	0/0:34,0:27:80.91:0,81,1201	0/0:30,0:24:65.99:0,66,1295	0/0:35,0:35:99:0,102,2455	0/0:24,0:24:45.12:0,45,749	0/0:21,0:21:45:0,45,551	0/0:33,0:32:80.55:0,81,1142	1/1:0,25:24:51.17:967,51,0	0/0:35,0:35:99:0,102,2485	0/0:31,0:31:90.23:0,90,2017	0/0:22,0:22:33.06:0,33,479	0/0:25,0:25:66.17:0,66,1523	0/0:26,0:26:75.17:0,75,1744	0/0:27,0:27:42.09:0,42,670	0/0:37,0:37:51.16:0,51,907	0/0:25,0:25:69.16:0,69,1607	0/0:18,0:18:32.92:0,33,399	0/0:25,0:24:57.14:0,57,705	0/0:29,0:29:39.13:0,39,811	0/0:14,0:14:20.88:0,21,191	0/0:22,0:22:41.98:0,42,510	0/0:26,0:25:75.18:0,75,1702	0/0:18,0:18:54.12:0,54,1194	0/0:22,0:22:29.53:0,30,374	0/0:40,0:40:99:0,108,2353	0/0:29,0:29:87.22:0,87,2027	0/0:15,0:15:45.13:0,45,1088
chr10	18150013	.	G	GCA	1338.60	PASS	AB=0.855;AC=17;AF=0.304;AN=56;BaseQRankSum=2.793;DP=406;FS=0.000;HRun=0;HaplotypeScore=114.3109;InbreedingCoeff=0.1063;MQ=46.45;MQ0=4;MQRankSum=-2.840;QD=6.08;ReadPosRankSum=-1.460;VQSLOD=2.3829;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:24:33.94:0,34,439	0/0:4,0:4:2.49:0,2,68	0/0:8,0:3:9.03:0,9,136	0/0:10,0:5:11.37:0,11,120	0/0:15,0:16:20.62:0,21,197	1/1:13,5:18:10.54:112,11,0	0/1:20,1:21:5.10:126,0,5	0/1:11,5:15:27.16:115,0,27	0/0:8,0:8:10.97:0,11,168	0/1:14,0:14:46.73:47,0,188	0/0:13,0:13:9.03:0,9,115	0/1:6,8:14:3.42:193,0,3	0/0:11,0:11:0.02:0,0,275	0/0:13,0:13:24.55:0,25,355	1/1:9,1:12:2.34:85,2,0	0/1:7,1:8:0.40:40,0,0	0/0:27,0:25:32.84:0,33,369	0/1:6,5:10:5.07:283,0,5	1/1:13,4:16:17.07:228,17,0	0/1:10,2:12:5.63:118,0,6	0/1:42,2:43:16.49:104,0,16	0/0:5,0:5:0:0,0,0	0/0:12,0:12:12.03:0,12,151	0/0:21,0:21:15.02:0,15,195	0/1:5,5:10:18.84:19,0,39	0/1:15,0:14:18.90:19,0,300	0/0:13,0:13:8.67:0,9,324	0/1:8,0:8:7.16:7,0,135
chr10	18150015	.	G	GCACACACA	3629.72	PASS	AB=0.938;AC=33;AF=0.660;AN=50;BaseQRankSum=-4.386;DP=431;FS=0.000;HRun=0;HaplotypeScore=160.7393;InbreedingCoeff=0.1980;MQ=43.90;MQ0=6;MQRankSum=-0.059;QD=11.52;ReadPosRankSum=-2.067;VQSLOD=2.3774;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:24:3.14:3,0,22	1/1:3,1:4:6.02:168,6,0	./.	./.	1/1:15,2:18:11.91:110,12,0	1/1:18,0:18:4:41,4,0	0/0:22,0:22:4.26:0,4,52	0/1:16,0:15:27.50:28,0,77	0/0:5,0:8:3.25:0,3,56	1/1:10,2:15:36.11:833,36,0	0/1:9,3:15:0:0,0,0	0/1:14,0:14:7.19:7,0,116	1/1:14,0:14:18.03:253,18,0	1/1:14,0:14:7.25:83,7,0	1/1:11,0:11:1.16:47,1,0	0/0:7,0:7:1.55:0,2,4	1/1:24,0:26:10.55:648,11,0	0/1:9,0:9:41.12:41,0,77	0/1:16,0:16:20.36:20,0,40	0/1:12,0:12:38.75:52,0,39	0/0:42,0:42:7.02:0,7,68	./.	1/1:11,0:11:0.47:1,0,0	1/1:24,0:24:8.97:71,9,0	0/0:10,0:10:3.01:0,3,76	1/1:24,0:22:42.85:615,43,0	1/1:15,1:14:2.60:350,3,0	1/1:6,0:9:18.01:259,18,0
chr10	18150043	.	ACG	A	381.30	PASS	AB=0.954;AC=21;AF=0.389;AN=54;BaseQRankSum=0.869;DP=436;FS=9.334;HRun=0;HaplotypeScore=122.3677;InbreedingCoeff=-0.3806;MQ=39.03;MQ0=23;MQRankSum=-0.628;QD=1.31;ReadPosRankSum=-1.432;VQSLOD=1.0147;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:16,2:17:6:66,6,0	0/1:3,0:3:16.18:16,0,32	0/0:24,0:3:8.79:0,9,68	0/1:36,0:7:6.56:7,0,42	0/1:20,0:20:30.87:31,0,114	0/1:12,1:14:14.02:14,0,28	0/1:9,1:10:4.39:4,0,89	0/0:22,0:17:15.79:0,16,254	1/1:4,0:4:3.40:19,3,0	0/1:20,0:20:1.85:2,0,325	0/0:17,0:17:11.97:0,12,99	0/1:13,0:13:38.58:39,0,114	0/1:11,0:11:19.18:19,0,150	0/1:9,0:9:16.45:16,0,32	0/1:6,4:10:15.67:16,0,54	0/0:3,0:3:2.60:0,3,34	0/1:28,0:26:99:158,0,111	0/0:10,0:10:2.75:0,3,168	0/1:19,0:16:23.77:24,0,113	0/1:12,0:12:31.10:31,0,59	0/0:27,0:23:9.07:0,9,88	./.	0/1:14,1:14:7.66:8,0,117	0/1:21,2:23:9.76:10,0,94	0/0:10,0:9:3.01:0,3,57	0/0:25,0:23:37.30:0,37,668	0/1:13,1:12:39.74:40,0,137	0/1:12,1:13:10.90:11,0,239
chr10	18150051	.	ATG	A	521.47	PASS	AB=0.939;AC=17;AF=0.315;AN=54;BaseQRankSum=4.125;DP=413;FS=22.859;HRun=0;HaplotypeScore=116.3731;InbreedingCoeff=-0.2295;MQ=38.81;MQ0=26;MQRankSum=-1.196;QD=2.51;ReadPosRankSum=-2.249;VQSLOD=0.3179;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:7,9:16:8.98:106,9,0	0/1:4,0:4:20.03:20,0,156	0/0:29,0:5:15.05:0,15,287	0/0:38,0:8:23.73:0,24,353	0/1:21,0:21:9.84:10,0,460	0/0:12,0:12:2.90:0,3,47	0/0:9,1:10:2.35:0,2,66	0/1:21,0:15:11.61:12,0,194	1/1:3,0:3:3.48:35,3,0	0/1:18,0:18:6.44:6,0,750	0/0:16,1:16:12.03:0,12,244	0/1:12,0:12:4.64:5,0,116	0/1:11,1:12:63.29:63,0,373	0/0:7,0:7:6.02:0,6,121	0/1:9,0:9:5.98:6,0,69	0/0:3,0:3:2.56:0,3,49	0/1:21,6:25:99:247,0,547	0/1:8,2:10:32.81:33,0,147	0/1:14,0:11:5.51:6,0,120	0/0:5,1:6:2.38:0,2,35	0/0:22,1:20:10.81:0,11,148	./.	0/1:13,3:15:24.17:24,0,322	0/0:16,4:20:8.36:0,8,182	0/0:8,1:8:3.01:0,3,50	0/0:21,2:21:11.27:0,11,1084	0/1:11,2:13:78.70:79,0,380	0/1:11,1:12:15.61:16,0,555
chr10	18150055	.	ACACACACAGG	A	2425.38	PASS	AB=0.861;AC=25;AF=0.463;AN=54;BaseQRankSum=0.746;DP=412;FS=1.562;HRun=0;HaplotypeScore=140.7125;InbreedingCoeff=0.5735;MQ=38.67;MQ0=28;MQRankSum=-3.199;QD=15.65;ReadPosRankSum=-1.012;VQSLOD=2.8243;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:16,0:16:30.64:31,0,57	0/1:4,0:4:20.01:20,0,253	0/0:34,0:7:9.02:0,9,444	0/0:40,0:9:27.09:0,27,447	0/0:21,0:21:23.49:0,23,710	0/1:6,5:11:0:0,0,0	0/1:3,5:8:0:0,0,0	1/1:9,10:13:29.13:665,29,0	1/1:4,0:4:6.02:135,6,0	0/0:19,0:18:41.99:0,42,1289	0/0:17,0:16:13.27:0,13,336	1/1:6,6:12:15.05:397,15,0	0/0:12,0:12:24.07:0,24,609	0/0:7,0:7:6.91:0,7,179	1/1:8,1:9:15.50:349,15,0	1/1:3,0:3:0.47:1,0,0	0/0:30,0:28:29.82:0,30,1025	1/1:6,2:8:15.05:253,15,0	1/1:6,5:8:18.06:512,18,0	1/1:2,3:5:3.01:45,3,0	1/1:10,12:19:6.02:141,6,0	./.	0/0:16,0:15:6.41:0,6,520	0/0:20,0:20:10.63:0,11,286	1/1:7,2:8:3.01:46,3,0	0/0:23,0:21:59.93:0,60,1719	0/1:14,0:13:8.36:8,0,736	0/0:12,0:12:18.89:0,19,719
chr10	18150063	.	AGG	A	1241.69	PASS	AB=0.949;AC=27;AF=0.519;AN=52;BaseQRankSum=4.866;DP=383;FS=1.524;HRun=2;HaplotypeScore=103.5226;InbreedingCoeff=0.3123;MQ=39.10;MQ0=24;MQRankSum=-4.579;QD=5.67;ReadPosRankSum=-1.194;VQSLOD=-0.4464;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:15,1:16:41.71:42,0,62	0/1:4,0:4:20.74:24,0,21	0/1:39,1:12:5.55:6,0,438	0/0:43,1:10:30:0,30,393	0/0:21,0:21:17.16:0,17,91	0/1:8,4:12:0:0,0,0	0/1:6,1:7:0.04:0,0,0	1/1:14,0:10:27.09:366,27,0	1/1:3,1:4:5.27:24,5,0	0/0:17,0:16:36.36:0,36,347	0/0:16,0:15:12.71:0,13,80	1/1:6,2:8:15.02:171,15,0	0/0:9,0:9:13.15:0,13,69	0/1:8,0:8:4.01:4,0,9	1/1:3,4:7:15.02:189,15,0	./.	0/1:28,0:28:41.36:41,0,134	1/1:4,3:7:14.98:176,15,0	1/1:8,2:7:0.01:167,0,0	1/1:4,0:4:3.01:45,3,0	1/1:17,1:15:6.02:76,6,0	./.	0/1:14,0:14:23.18:23,0,81	0/0:18,0:18:9.76:0,10,47	1/1:5,3:7:3.01:46,3,0	0/0:22,0:21:54.79:0,55,405	0/1:10,0:10:10.82:11,0,86	0/0:11,0:11:27.42:0,27,193
chr10	18150065	.	GCA	G	3108.98	PASS	AB=1.000;AC=35;AF=0.729;AN=48;BaseQRankSum=-0.480;DP=395;FS=11.789;HRun=0;HaplotypeScore=99.4878;InbreedingCoeff=0.4099;MQ=39.47;MQ0=23;MQRankSum=-0.397;QD=12.00;ReadPosRankSum=7.124;VQSLOD=2.2074;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:14.90:0,15,174	1/1:1,3:4:9.03:110,9,0	0/0:39,0:12:26.83:0,27,332	0/0:44,0:11:3.30:0,3,152	1/1:6,15:21:24.07:293,24,0	0/0:14,0:13:3.01:0,3,43	0/0:7,0:7:0:0,0,0	0/1:18,0:14:55.72:56,0,74	1/1:4,0:4:4.35:17,4,0	1/1:7,10:16:27.04:313,27,0	1/1:7,8:15:14.68:158,15,0	1/1:8,0:8:11.30:55,11,0	1/1:2,7:9:21:238,21,0	1/1:3,5:8:9.01:110,9,0	1/1:7,0:7:0.35:29,0,0	./.	1/1:10,16:27:47.01:561,47,0	0/1:8,0:9:7.08:7,0,14	0/1:15,0:12:29.30:29,0,194	./.	1/1:21,0:18:2.80:13,3,0	./.	1/1:7,6:14:17.89:197,18,0	1/1:11,7:18:12.25:146,12,0	./.	1/1:5,17:21:47.91:499,48,0	1/1:4,6:10:2.07:201,2,0	1/1:3,5:11:23.56:225,24,0
chr10	18150106	.	C	CTTTT	2948.20	PASS	AB=1.000;AC=28;AF=0.500;AN=56;BaseQRankSum=-2.955;DP=285;FS=7.779;HRun=10;HaplotypeScore=71.4363;InbreedingCoeff=0.7316;MQ=62.35;MQ0=4;MQRankSum=-4.238;QD=21.21;ReadPosRankSum=0.381;VQSLOD=0.8667;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,0:17:27.08:334,27,0	0/0:4,0:4:9.01:0,9,126	0/0:12,0:8:5.94:0,6,70	0/1:15,0:10:7.61:8,0,33	0/0:17,0:17:45.09:0,45,599	1/1:4,13:17:30.10:706,30,0	1/1:1,1:2:3.01:71,3,0	1/1:15,1:14:20.97:324,21,0	1/1:0,0:2:6.02:74,6,0	0/0:10,0:9:20.77:0,21,259	0/0:8,0:8:18.02:0,18,237	1/1:4,4:7:6.02:141,6,0	0/0:6,0:6:5.99:0,6,85	0/0:2,0:2:2.97:0,3,42	1/1:5,2:9:12.04:216,12,0	1/1:2,3:5:8.92:158,9,0	0/0:31,0:30:67.30:0,67,932	1/1:5,7:11:18.05:379,18,0	1/1:9,8:17:21.06:400,21,0	1/1:1,3:4:6.02:140,6,0	1/1:2,1:3:3.90:56,4,0	0/1:3,0:3:0:0,0,0	0/0:11,0:11:27.06:0,27,364	0/0:5,0:5:12.02:0,12,170	1/1:2,6:8:6.02:141,6,0	0/0:13,0:13:29.97:0,30,368	0/0:13,0:12:26.50:0,27,303	0/0:14,0:14:35.94:0,36,409
chr10	18150484	.	A	AC	1151	PASS	AB=1.000;AC=20;AF=0.357;AN=56;BaseQRankSum=8.295;DP=495;FS=4.121;HRun=2;HaplotypeScore=71.7659;InbreedingCoeff=0.4181;MQ=57.14;MQ0=20;MQRankSum=5.834;QD=4.25;ReadPosRankSum=3.553;VQSLOD=0.9417;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:35,0:34:32.64:33,0,66	1/1:4,2:6:0.06:51,0,0	0/1:7,0:4:8.72:10,0,9	0/0:8,0:5:5.04:0,5,37	1/1:25,0:25:36.40:139,36,0	0/1:15,0:15:5.47:5,0,103	0/0:15,0:12:17.54:0,18,176	0/0:23,0:22:4.92:0,5,180	0/0:11,0:11:5.24:0,5,54	1/1:33,0:32:62.93:272,63,0	1/1:25,1:26:45.10:258,45,0	0/0:12,0:11:6.62:0,7,96	0/0:13,0:13:29.94:0,30,311	0/0:11,0:10:22.31:0,22,247	0/1:16,0:16:0.19:0,0,91	0/0:11,0:11:14.89:0,15,121	1/1:28,2:28:16.89:155,17,0	0/0:18,0:18:2.97:0,3,122	0/0:21,0:17:16.04:0,16,164	0/0:23,0:23:0.85:0,1,108	0/1:9,0:7:6.53:7,0,41	0/0:10,0:10:5.18:0,5,67	0/0:21,0:20:44.70:0,45,411	0/0:13,0:13:35.86:0,36,355	0/0:12,0:11:6.71:0,7,100	1/1:25,0:24:37.24:165,37,0	1/1:25,1:25:30.22:199,30,0	0/1:17,0:12:27.89:37,0,28
chr10	18150486	.	C	CA	2762.21	PASS	AB=0.750;AC=23;AF=0.411;AN=56;BaseQRankSum=-10.157;DP=498;FS=4.394;HRun=13;HaplotypeScore=68.5271;InbreedingCoeff=0.3063;MQ=57.35;MQ0=17;MQRankSum=0.385;QD=10.62;ReadPosRankSum=-0.139;VQSLOD=3.1592;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,27:34:51.25:569,51,0	0/1:6,0:6:11.22:11,0,65	0/1:9,0:4:12.11:21,0,12	0/0:9,0:5:4.85:0,5,26	0/0:24,0:25:54.81:0,55,363	0/1:4,10:15:5.23:229,0,5	0/1:9,3:12:20.45:92,0,20	1/1:8,13:21:18.46:314,18,0	1/1:5,7:12:9.01:84,9,0	0/0:32,0:31:72.24:0,72,493	0/0:26,0:27:35.28:0,35,317	0/1:8,4:11:2.83:105,0,3	0/0:12,0:12:26.65:0,27,180	0/1:9,1:9:7.04:7,0,102	1/1:6,11:17:6.45:202,6,0	0/1:5,4:11:2.79:98,0,3	0/0:29,0:27:34.60:0,35,403	1/1:10,9:18:1.92:219,2,0	0/1:15,7:20:2.41:237,0,2	1/1:7,14:22:28.74:365,29,0	0/1:4,6:8:2.56:121,0,3	0/1:3,7:11:2.67:108,0,3	0/0:19,0:20:27.90:0,28,173	0/0:14,0:14:23.68:0,24,158	0/1:7,6:12:8.98:160,0,9	0/0:24,0:25:55.41:0,55,424	0/0:25,0:25:31.32:0,31,313	0/0:16,0:12:18.67:0,19,113
chr10	18151253	.	T	TCCATGG	11722.58	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=13.731;DP=667;FS=2.191;HRun=0;HaplotypeScore=147.5733;InbreedingCoeff=0.9947;MQ=54.27;MQ0=6;MQRankSum=-15.998;QD=59.51;ReadPosRankSum=-0.654;VQSLOD=5.0684;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:84.29:0,84,1856	0/0:10,0:10:24.07:0,24,494	0/0:27,0:18:42.10:0,42,841	0/0:26,0:15:39.13:0,39,806	0/0:18,0:18:51.17:0,51,1113	1/1:7,10:16:33.07:973,33,0	1/1:13,20:32:63.22:2028,63,0	0/0:19,0:18:33.09:0,33,640	0/0:25,0:25:72.20:0,72,1473	0/0:17,0:17:45.14:0,45,949	0/0:20,0:20:45.15:0,45,1005	1/1:13,22:36:66.23:2233,66,0	0/0:22,0:22:60.21:0,60,1337	0/0:30,0:30:78.27:0,78,1685	1/1:7,17:22:63.13:1820,63,0	1/1:9,19:30:57.15:1661,57,0	0/0:45,0:45:99:0,114,2482	1/1:8,10:17:45.11:1459,45,0	0/0:10,0:9:18.05:0,18,345	0/0:19,0:19:45.15:0,45,1005	0/0:45,0:45:99:0,114,2437	1/1:5,10:15:30.10:979,30,0	0/0:18,0:18:30.10:0,30,669	0/0:31,0:30:78.27:0,78,1695	1/1:9,7:15:21.03:570,21,0	0/0:18,0:18:45.15:0,45,970	0/0:29,0:29:75.20:0,75,1515	0/0:7,0:7:15.05:0,15,335
chr10	18153104	.	C	CCAG	16709.62	PASS	AB=0.556;AC=23;AF=0.411;AN=56;BaseQRankSum=-16.921;DP=744;FS=3.254;HRun=0;HaplotypeScore=93.6131;InbreedingCoeff=0.9306;MQ=81.99;MQ0=0;MQRankSum=-3.762;QD=54.08;ReadPosRankSum=4.846;VQSLOD=7.2956;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:84.26:0,84,1322	1/1:2,12:14:39.13:858,39,0	0/0:28,0:28:78.27:0,78,1240	0/0:15,0:15:39.13:0,39,597	1/1:0,26:26:69.24:1480,69,0	0/0:43,0:43:99:0,123,1976	0/0:13,0:13:39.13:0,39,625	0/0:52,0:52:99:0,144,2244	0/0:19,0:19:54.17:0,54,840	1/1:7,17:25:60.18:1236,60,0	1/1:4,29:34:93.32:1977,93,0	0/0:26,0:26:72.23:0,72,1132	1/1:1,23:24:63.22:1389,63,0	1/1:1,17:18:45.15:992,45,0	0/0:37,0:37:99:0,102,1587	0/0:25,0:25:72.25:0,72,1157	1/1:1,24:25:66.23:1456,66,0	0/0:24,0:24:66.23:0,66,1060	0/0:18,0:18:54.10:0,54,792	0/0:35,0:35:99:0,99,1588	0/0:19,0:19:54.18:0,54,867	0/0:30,0:30:84.29:0,84,1349	1/1:5,20:25:51.18:1124,51,0	0/1:4,16:20:12.04:692,0,12	0/0:19,0:19:57.19:0,57,916	1/1:3,26:30:81.25:1684,81,0	1/1:2,36:38:99:2183,99,0	1/1:3,23:30:75.26:1637,75,0
chr10	18159552	.	GCA	G	11402.87	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=15.445;DP=743;FS=0.578;HRun=0;HaplotypeScore=87.8453;InbreedingCoeff=0.9998;MQ=94.82;MQ0=1;MQRankSum=-2.728;QD=38.39;ReadPosRankSum=0.431;VQSLOD=6.4088;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,123,2302	0/0:10,0:10:30.10:0,30,549	0/0:39,0:39:99:0,108,1890	0/0:29,0:28:75.26:0,75,1388	0/0:27,0:27:75.26:0,75,1390	1/1:0,33:33:93.31:1370,93,0	1/1:0,15:15:39.13:574,39,0	1/1:2,33:35:96.32:1410,96,0	0/0:21,0:21:63.22:0,63,1173	0/0:39,0:39:99:0,114,2107	0/0:24,0:24:69.24:0,69,1283	1/1:1,19:20:51.17:751,51,0	0/0:35,0:35:99:0,102,1901	0/0:28,0:28:81.26:0,81,1485	1/1:1,29:30:81.27:1193,81,0	1/1:1,32:33:28.08:1136,28,0	0/0:30,0:30:84.22:0,84,1463	1/1:0,19:19:48.16:707,48,0	1/1:2,25:27:75.23:1082,75,0	1/1:0,24:23:63.21:928,63,0	1/1:1,28:29:69.23:1015,69,0	1/1:0,18:18:48.16:707,48,0	0/0:32,0:32:96.33:0,96,1790	0/0:21,0:21:60.21:0,60,1112	1/1:0,14:14:36.12:530,36,0	0/0:25,0:25:72.25:0,72,1349	0/0:34,0:34:99:0,102,1899	0/0:11,0:11:33.11:0,33,618
chr10	18162083	.	CT	C	1548.86	PASS	AB=0.763;AC=18;AF=0.321;AN=56;BaseQRankSum=0.453;DP=553;FS=4.613;HRun=14;HaplotypeScore=81.9765;InbreedingCoeff=0.3696;MQ=62.85;MQ0=6;MQRankSum=1.896;QD=5.82;ReadPosRankSum=0.900;VQSLOD=2.7925;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,1:37:19.43:0,19,496	0/1:3,6:9:7.07:102,0,7	0/0:16,0:8:8.48:0,8,58	0/0:16,0:8:3.45:0,3,22	1/1:15,11:26:35.42:233,35,0	0/1:18,2:20:13.93:14,0,239	0/0:16,1:17:32.88:0,33,275	0/1:35,3:36:12.49:12,0,276	1/1:9,2:12:14.70:97,15,0	1/1:18,5:23:25.66:168,26,0	1/1:4,14:19:14.36:228,14,0	0/0:16,0:16:29.79:0,30,232	0/0:15,0:16:35.10:0,35,273	0/0:18,0:18:21.80:0,22,200	0/1:12,0:11:5.10:5,0,88	0/0:10,0:11:23.85:0,24,204	0/1:14,16:31:4:215,0,4	0/0:17,4:21:14.73:0,15,244	0/0:17,0:19:29.68:0,30,245	0/0:24,0:25:56.04:0,56,515	0/0:15,0:16:8.60:0,9,239	0/0:20,0:21:37.63:0,38,302	0/1:15,4:18:11.05:11,0,176	0/0:21,1:22:1.22:0,1,267	0/0:16,0:16:30.40:0,30,258	0/1:8,15:23:8.57:239,0,9	1/1:14,8:22:46.80:301,47,0	0/1:3,6:9:7:102,0,7
chr10	18165221	.	AATT	A	13794.09	PASS	AB=0.531;AC=27;AF=0.482;AN=56;BaseQRankSum=14.980;DP=753;FS=11.819;HRun=0;HaplotypeScore=113.4389;InbreedingCoeff=0.9242;MQ=85.30;MQ0=0;MQRankSum=-5.403;QD=35.01;ReadPosRankSum=3.357;VQSLOD=5.1807;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,40:42:92.68:1458,93,0	0/0:19,0:19:48.16:0,48,1056	0/0:30,0:30:63.17:0,63,1354	0/0:19,0:19:33.16:0,33,840	0/0:26,0:26:78.27:0,78,1675	1/1:0,16:16:39.13:625,39,0	1/1:3,29:32:63.21:1027,63,0	1/1:2,33:35:99:1561,99,0	1/1:2,29:31:81.28:1310,81,0	0/0:37,0:37:99:0,111,2430	0/0:22,0:22:66.17:0,66,1382	0/1:3,23:26:79.85:729,0,80	0/0:38,0:38:99:0,111,2445	0/0:33,0:33:87.29:0,87,1905	1/1:5,29:34:66.23:1075,66,0	1/1:2,21:23:60.20:956,60,0	0/0:23,0:23:69.22:0,69,1481	1/1:3,11:14:36.12:586,36,0	1/1:2,16:18:48.08:684,48,0	1/1:1,23:24:48.16:784,48,0	1/1:6,34:40:68.11:1145,68,0	1/1:0,30:30:54.10:824,54,0	0/0:21,0:21:60.15:0,60,1251	0/0:26,0:26:78.25:0,78,1611	1/1:2,27:29:63.22:1029,63,0	0/0:27,0:27:78.27:0,78,1727	0/0:30,0:30:84.29:0,84,1871	0/0:8,0:8:12.04:0,12,250
chr10	18165879	.	G	GA	5966.35	PASS	AB=0.767;AC=24;AF=0.429;AN=56;BaseQRankSum=-11.613;DP=588;FS=3.516;HRun=10;HaplotypeScore=63.0563;InbreedingCoeff=0.8823;MQ=70.42;MQ0=0;MQRankSum=1.616;QD=22.51;ReadPosRankSum=-1.068;VQSLOD=5.4620;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:42:91.89:0,92,745	0/0:18,0:18:41.89:0,42,339	0/1:10,0:10:0.84:1,0,73	0/0:6,0:6:5.59:0,6,34	0/0:22,3:25:30.91:0,31,457	1/1:3,17:22:35.17:548,35,0	1/1:4,15:19:39.10:416,39,0	1/1:4,15:20:23.28:419,23,0	0/0:12,0:12:32.96:0,33,270	0/0:24,0:25:58.92:0,59,469	0/0:14,0:14:32.96:0,33,271	1/1:5,10:15:36.08:373,36,0	0/0:18,0:18:44.93:0,45,367	0/0:22,0:22:47.91:0,48,391	1/1:3,18:21:29.49:519,29,0	1/1:3,13:17:38.93:398,39,0	0/0:26,0:26:62.91:0,63,517	0/1:2,13:16:7.18:339,0,7	1/1:4,17:22:56.95:575,57,0	1/1:3,27:31:83.91:840,84,0	1/1:3,15:18:39.10:416,39,0	1/1:2,21:23:51.05:519,51,0	0/0:28,0:28:59.86:0,60,492	0/0:21,0:21:44.90:0,45,365	1/1:6,25:31:57.14:602,57,0	0/0:25,0:25:59.89:0,60,493	0/0:28,0:28:74.76:0,75,612	0/0:13,0:13:32.94:0,33,269
chr10	18165976	.	C	CTT	3488.14	PASS	AB=0.938;AC=44;AF=0.786;AN=56;BaseQRankSum=-5.684;DP=521;FS=2.539;HRun=17;HaplotypeScore=97.6290;InbreedingCoeff=0.2241;MQ=76.15;MQ0=2;MQRankSum=-0.879;QD=7.68;ReadPosRankSum=-1.136;VQSLOD=0.6259;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:48,2:50:38.66:428,39,0	1/1:4,0:4:2.69:7,3,0	0/0:24,0:19:4.40:0,4,42	0/0:17,0:12:1.67:0,2,17	1/1:26,0:26:2.04:38,2,0	1/1:27,0:27:33.60:249,34,0	1/1:14,1:15:5.26:158,5,0	1/1:26,0:26:22.75:232,23,0	1/1:10,1:11:23.88:210,24,0	1/1:16,0:16:10.85:72,11,0	1/1:17,0:17:2.84:20,3,0	0/1:10,3:13:0.21:147,0,0	0/1:14,0:14:0.89:34,0,1	1/1:17,0:18:5.46:66,5,0	1/1:17,1:18:19.84:168,20,0	1/1:13,0:13:32.39:238,32,0	0/1:25,0:24:25.14:25,0,28	1/1:20,2:22:41.83:387,42,0	1/1:20,0:20:31.99:234,32,0	1/1:14,2:16:24.66:187,25,0	0/1:7,2:9:3.13:83,0,3	1/1:21,1:22:34.30:282,34,0	1/1:16,0:16:0.87:4,1,0	0/1:13,0:13:9.92:13,0,10	1/1:12,0:13:19.17:148,19,0	0/0:26,0:25:5.32:0,5,31	1/1:13,0:20:3.31:45,3,0	0/1:9,0:9:6.09:12,0,6
chr10	18165977	.	T	TTTC	4890.09	PASS	AB=1.000;AC=28;AF=0.500;AN=56;BaseQRankSum=0.349;DP=542;FS=8.039;HRun=0;HaplotypeScore=108.9744;InbreedingCoeff=0.8428;MQ=74.49;MQ0=3;MQRankSum=3.000;QD=15.93;ReadPosRankSum=4.696;VQSLOD=4.0452;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:47,5:52:44.30:657,44,0	0/0:4,0:4:10.05:0,10,78	0/0:23,0:18:5.92:0,6,211	0/1:17,0:12:5.07:5,0,80	0/0:27,0:27:55.39:0,55,459	1/1:27,0:27:29.91:299,30,0	1/1:16,1:16:8.62:173,9,0	1/1:29,0:29:67.46:524,67,0	1/1:11,0:11:19.34:154,19,0	0/0:16,0:16:36:0,36,284	0/0:18,0:18:40.33:0,40,354	1/1:13,0:13:16.89:268,17,0	0/0:14,0:14:28.45:0,28,228	0/0:19,0:18:42.45:0,42,314	1/1:18,0:18:43.31:359,43,0	1/1:14,0:14:34.54:333,35,0	0/0:29,0:28:48.59:0,49,479	1/1:24,0:24:55.50:477,55,0	1/1:22,0:22:55.35:518,55,0	1/1:18,0:18:27.28:292,27,0	0/1:9,0:9:11.56:129,0,12	1/1:21,1:22:56.39:448,56,0	0/0:16,0:16:31.16:0,31,257	0/0:13,0:13:26.07:0,26,260	1/1:14,0:14:24.55:255,25,0	0/0:26,0:25:50.87:0,51,481	0/0:21,0:21:13.88:0,14,155	0/0:9,0:9:22.24:0,22,216
chr10	18165978	.	T	TTC	6724.43	PASS	AB=0.900;AC=28;AF=0.500;AN=56;BaseQRankSum=-5.007;DP=561;FS=0.000;HRun=0;HaplotypeScore=99.4054;InbreedingCoeff=0.8459;MQ=72.73;MQ0=3;MQRankSum=4.847;QD=20.69;ReadPosRankSum=5.370;VQSLOD=5.0351;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:20,33:56:7.77:772,8,0	0/0:5,0:5:11.81:0,12,90	0/0:23,0:18:1.35:0,1,198	0/1:17,0:11:4.50:4,0,79	0/0:28,0:28:62.95:0,63,502	1/1:6,22:29:28.53:509,29,0	1/1:9,10:19:26.89:372,27,0	1/1:9,20:30:70.68:684,71,0	1/1:5,8:13:26.79:310,27,0	0/0:15,0:15:39.13:0,39,309	0/0:19,0:19:44.09:0,44,373	1/1:12,1:13:27.83:342,28,0	0/0:13,0:13:31.50:0,31,247	0/0:20,0:19:45.48:0,45,347	1/1:14,4:18:42.06:452,42,0	1/1:7,7:14:36.05:483,36,0	0/0:28,0:27:52.46:0,52,468	1/1:17,10:27:49.55:724,50,0	1/1:18,7:25:57.36:627,57,0	1/1:5,12:18:9.99:350,10,0	0/1:6,2:8:3.21:187,0,3	1/1:5,18:23:47.85:596,48,0	0/0:16,0:16:35.80:0,36,288	0/0:13,0:13:28.37:0,28,267	1/1:10,4:14:23.44:312,23,0	0/0:25,0:24:59.81:0,60,525	0/0:20,0:20:25.72:0,26,229	0/0:11,0:10:22.24:0,22,201
chr10	18165979	.	T	TC	3140.83	PASS	AB=0.958;AC=23;AF=0.411;AN=56;BaseQRankSum=2.712;DP=554;FS=18.617;HRun=0;HaplotypeScore=92.6772;InbreedingCoeff=0.4849;MQ=72.66;MQ0=3;MQRankSum=4.031;QD=10.03;ReadPosRankSum=7.766;VQSLOD=2.1418;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:52,2:54:9.87:349,0,10	0/0:5,0:5:11.88:0,12,89	0/0:23,0:18:3.22:0,3,190	0/1:17,0:11:4.07:4,0,76	0/0:28,0:28:67.11:0,67,535	1/1:27,2:29:12.03:271,12,0	1/1:17,0:16:6.82:122,7,0	1/1:25,3:28:8.45:422,8,0	1/1:12,0:12:15.45:111,15,0	0/0:15,0:15:42.15:0,42,330	0/0:20,0:20:44.87:0,45,373	1/1:12,1:13:15.06:194,15,0	0/0:14,0:14:37.88:0,38,287	0/0:20,0:19:47.10:0,47,360	1/1:16,1:17:33.25:307,33,0	1/1:13,0:13:27.08:198,27,0	0/0:28,0:27:54.98:0,55,490	0/1:24,2:26:34.52:304,0,35	0/1:25,0:25:34.45:319,0,34	0/1:18,0:18:28.60:159,0,29	0/1:8,0:8:10.67:83,0,11	1/1:22,1:23:42.78:337,43,0	0/0:13,0:13:35.84:0,36,288	0/0:12,0:12:28.38:0,28,267	0/1:10,3:13:2.67:159,0,3	0/0:27,0:26:66.73:0,67,572	0/0:21,0:21:34.66:0,35,266	0/0:15,0:14:22.69:0,23,193
chr10	18168377	.	G	GT	6428.22	PASS	AB=0.585;AC=27;AF=0.482;AN=56;BaseQRankSum=-8.265;DP=582;FS=4.901;HRun=9;HaplotypeScore=65.6704;InbreedingCoeff=0.9373;MQ=57.63;MQ0=7;MQRankSum=-0.294;QD=20.21;ReadPosRankSum=-1.911;VQSLOD=4.6211;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:2,37:39:81.18:879,81,0	0/0:9,0:9:26.99:0,27,233	0/0:17,0:10:23.93:0,24,202	0/0:18,0:7:11.84:0,12,92	0/0:22,0:22:50.94:0,51,437	1/1:8,25:33:60.12:638,60,0	1/1:5,19:25:37.75:594,38,0	1/1:12,13:20:13.03:360,13,0	1/1:3,13:16:33.09:365,33,0	0/0:27,0:27:56.94:0,57,491	0/0:11,0:11:26.97:0,27,234	1/1:3,18:22:27.89:506,28,0	0/0:27,0:27:65.97:0,66,573	0/0:16,0:16:29.98:0,30,260	0/1:7,17:24:0.98:439,0,1	1/1:5,9:14:27.04:286,27,0	0/0:20,0:22:52.06:0,52,428	1/1:8,12:19:9.12:366,9,0	1/1:8,10:16:38.89:390,39,0	1/1:10,14:27:36.52:546,37,0	1/1:2,14:16:39.11:430,39,0	1/1:7,10:17:24.02:250,24,0	0/0:26,0:26:65.71:0,66,572	0/0:16,0:16:32.97:0,33,286	1/1:4,14:19:15.98:379,16,0	0/0:27,0:27:68.96:0,69,599	0/0:20,0:20:50.96:0,51,439	0/0:6,0:6:11.99:0,12,104
chr10	18168429	.	CTTTT	C	3188.87	PASS	AB=0.790;AC=26;AF=0.464;AN=56;BaseQRankSum=1.870;DP=517;FS=6.938;HRun=17;HaplotypeScore=98.0311;InbreedingCoeff=0.6928;MQ=52.81;MQ0=6;MQRankSum=1.634;QD=10.35;ReadPosRankSum=4.178;VQSLOD=-0.3478;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:31,10:44:22.94:448,23,0	0/0:3,0:3:6.02:0,6,119	0/0:3,0:1:0:0,0,0	0/0:11,0:8:8.01:0,8,71	0/0:18,0:19:35.97:0,36,531	1/1:22,8:32:2.17:482,2,0	0/1:12,6:20:10.56:146,0,11	1/1:23,5:20:23.43:262,23,0	1/1:12,2:14:17.42:201,17,0	0/0:23,0:25:50.89:0,51,627	0/0:14,0:13:23.22:0,23,280	1/1:12,3:17:0.34:169,0,0	0/0:18,0:18:36.08:0,36,692	0/0:20,0:20:45:0,45,667	1/1:13,5:20:22.56:271,23,0	1/1:11,4:16:27.75:272,28,0	0/0:12,0:12:30.06:0,30,500	0/1:11,2:12:10.33:89,0,10	1/1:15,2:15:9.60:97,10,0	1/1:9,12:23:24.67:292,25,0	1/1:16,4:19:4.31:197,4,0	1/1:9,3:12:2.06:173,2,0	0/0:13,0:18:33.03:0,33,495	0/0:18,0:18:26.77:0,27,482	1/1:20,7:26:26.02:291,26,0	0/0:20,0:21:35.85:0,36,387	0/0:19,0:19:28.31:0,28,495	0/0:3,0:3:9.01:0,9,142
chr10	18172055	.	T	TCTCACACAAAAGCAAGGGTGCCACCA	59215.82	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=4.671;DP=665;FS=6.224;HRun=0;HaplotypeScore=369.8320;InbreedingCoeff=0.9991;MQ=87.32;MQ0=0;MQRankSum=-18.567;QD=161.79;ReadPosRankSum=-0.212;VQSLOD=3.7292;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:36,0:36:87.14:5811,87,0	0/0:8,0:8:24.08:0,24,1313	0/0:36,0:37:83.46:0,83,3702	0/0:22,0:22:63.22:0,63,2885	0/0:15,0:15:36.09:0,36,1684	1/1:10,3:18:27.09:2828,27,0	1/1:22,0:22:60.09:3941,60,0	1/1:33,0:33:87.28:5191,87,0	1/1:19,6:39:69.24:7101,69,0	0/0:19,0:19:53.21:0,53,2970	0/0:14,0:14:42.13:0,42,2538	1/1:18,4:37:57.67:5472,58,0	0/0:39,0:39:99:0,114,6133	0/0:27,0:27:78.26:0,78,4704	1/1:12,5:26:48.03:5063,48,0	1/1:11,8:33:51.18:4951,51,0	0/0:21,0:21:57.17:0,57,3461	1/1:8,0:8:23.93:1827,24,0	1/1:9,1:23:57.10:3873,57,0	1/1:15,2:30:36.12:3020,36,0	1/1:15,0:15:30.09:1545,30,0	1/1:13,0:13:30.10:2760,30,0	0/0:15,0:15:39.13:0,39,2474	0/0:22,0:22:63.20:0,63,3424	1/1:22,2:33:66.23:5833,66,0	0/0:16,0:16:45.13:0,45,2385	0/0:30,0:28:84.25:0,84,4812	0/0:14,0:14:42.12:0,42,2735
chr10	18172248	.	C	CACAG	14826.95	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-16.065;DP=676;FS=0.674;HRun=0;HaplotypeScore=98.7504;InbreedingCoeff=0.9992;MQ=84.95;MQ0=0;MQRankSum=-6.989;QD=47.83;ReadPosRankSum=1.932;VQSLOD=5.3825;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,29:35:69.24:1749,69,0	0/0:15,0:15:39.12:0,39,651	0/0:34,0:34:77.41:0,77,1294	0/0:28,0:28:66.22:0,66,1103	0/0:29,0:29:78.25:0,78,1316	1/1:5,18:23:45.15:1142,45,0	1/1:2,15:17:36.12:913,36,0	1/1:9,19:31:78.25:1612,78,0	1/1:5,24:30:57.20:1441,57,0	0/0:25,0:25:72.24:0,72,1225	0/0:26,0:26:72.21:0,72,1216	1/1:2,14:16:30.10:754,30,0	0/0:33,0:33:90.28:0,90,1510	0/0:21,0:21:51.14:0,51,831	1/1:6,9:17:27.09:682,27,0	1/1:5,10:16:27.09:684,27,0	0/0:20,0:20:60.21:0,60,1037	1/1:3,8:11:24.08:609,24,0	1/1:10,9:20:39.08:765,39,0	1/1:7,24:31:69.24:1750,69,0	1/1:5,20:25:36.12:914,36,0	1/1:4,16:20:42.14:1066,42,0	0/0:28,0:28:81.26:0,81,1377	0/0:27,0:27:75.22:0,75,1237	1/1:3,14:18:30.10:745,30,0	0/0:22,0:22:51.15:0,51,855	0/0:36,0:36:99:0,99,1711	0/0:22,0:22:63.22:0,63,1088
chr10	18172906	.	G	GTT	2148.81	PASS	AB=0.806;AC=22;AF=0.393;AN=56;BaseQRankSum=2.149;DP=406;FS=0.000;HRun=3;HaplotypeScore=75.9037;InbreedingCoeff=0.7715;MQ=58.26;MQ0=17;MQRankSum=-1.252;QD=12.64;ReadPosRankSum=1.431;VQSLOD=0.4032;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:17:38.88:0,39,280	1/1:2,0:2:6:54,6,0	0/0:40,0:19:35.28:0,35,353	0/0:48,0:18:21.47:0,21,242	1/1:4,12:17:22.09:176,22,0	0/0:11,0:11:14.71:0,15,124	0/0:9,0:7:14.98:0,15,124	0/0:19,0:17:31.89:0,32,286	0/0:4,0:4:11.83:0,12,88	1/1:19,0:19:34.75:306,35,0	0/1:12,0:12:10.15:85,0,10	0/0:7,0:7:14.91:0,15,116	1/1:16,0:14:32.93:282,33,0	1/1:10,0:9:3.01:38,3,0	0/0:5,0:5:11.98:0,12,99	0/0:14,0:14:14.97:0,15,123	1/1:20,0:20:42.28:392,42,0	0/0:11,0:11:11.93:0,12,96	0/0:12,0:11:29.52:0,30,258	0/0:8,0:8:11.74:0,12,99	0/0:13,0:12:32.71:0,33,265	0/0:6,0:6:11.99:0,12,100	0/1:4,0:11:6.27:24,0,6	1/1:14,0:14:29.96:258,30,0	0/0:11,0:11:26.94:0,27,223	1/1:12,0:12:20.17:181,20,0	1/1:13,0:13:3.01:38,3,0	1/1:24,0:23:59.13:521,59,0
chr10	18172908	.	T	TTTTCTCTCTC	8012.48	PASS	AB=1.000;AC=27;AF=0.482;AN=56;BaseQRankSum=2.372;DP=473;FS=19.887;HRun=0;HaplotypeScore=134.3421;InbreedingCoeff=0.6971;MQ=54.07;MQ0=19;MQRankSum=-3.093;QD=29.79;ReadPosRankSum=-2.171;VQSLOD=2.6354;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:19,0:18:50.86:51,0,201	1/1:3,0:3:9.01:149,9,0	0/0:37,0:16:35.08:0,35,353	0/0:47,0:17:22.71:0,23,244	1/1:23,0:23:38.83:517,39,0	0/0:11,0:11:14.81:0,15,133	0/0:9,0:7:11.82:0,12,98	0/0:22,0:19:1.01:0,1,250	0/0:6,0:6:3.53:0,4,46	1/1:24,0:24:63.09:1099,63,0	1/1:16,0:15:42.02:747,42,0	0/1:7,0:7:15.75:16,0,60	1/1:21,0:19:54.11:991,54,0	1/1:4,6:15:12.04:438,12,0	0/0:5,0:5:8.42:0,8,74	0/0:14,0:14:14.97:0,15,123	1/1:22,0:22:10.97:477,11,0	0/0:13,0:13:11.93:0,12,149	0/1:18,0:17:4:4,0,240	0/0:9,0:9:9.19:0,9,75	0/0:14,0:12:26.89:0,27,216	0/0:6,0:6:8.94:0,9,75	1/1:13,1:14:21.39:408,21,0	1/1:16,0:16:36.49:464,36,0	0/0:11,0:11:26.93:0,27,257	1/1:20,0:19:54.05:1073,54,0	1/1:7,10:23:21.40:620,21,0	1/1:27,0:26:31.82:958,32,0
chr10	18172936	.	CTCTCTCTT	C	2184.55	PASS	AB=0.995;AC=29;AF=0.518;AN=56;BaseQRankSum=-4.151;DP=472;FS=5.406;HRun=0;HaplotypeScore=120.2890;InbreedingCoeff=0.4532;MQ=49.96;MQ0=27;MQRankSum=2.812;QD=8.09;ReadPosRankSum=-6.324;VQSLOD=-0.4263;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:21,0:20:43.83:44,0,409	0/0:3,0:3:2.97:0,3,20	0/1:21,0:5:1.79:2,0,27	0/1:29,0:8:1.97:14,0,2	0/0:29,0:29:40.82:0,41,794	1/1:14,0:15:16.55:207,17,0	1/1:9,0:7:8.99:76,9,0	1/1:20,0:14:1.23:142,1,0	0/1:10,0:10:1.54:139,0,2	0/0:26,0:25:45.81:0,46,1357	0/0:25,0:23:1.62:0,2,890	1/1:11,0:11:26.28:257,26,0	0/0:15,0:13:20.69:0,21,404	0/0:15,0:14:17.92:0,18,287	1/1:8,0:8:21.38:219,21,0	1/1:13,0:13:1.41:3,1,0	0/1:19,0:19:4.44:4,0,478	0/1:17,0:17:18.25:18,0,44	1/1:5,9:13:33.18:317,33,0	1/1:19,0:19:30.57:269,31,0	1/1:13,0:11:18.92:175,19,0	1/1:7,0:7:14.98:125,15,0	0/0:16,0:16:22.88:0,23,381	0/1:11,0:11:70.40:70,0,130	1/1:12,0:12:26.94:289,27,0	0/0:25,0:24:28.98:0,29,1314	0/0:15,0:15:12.37:0,12,206	0/0:33,0:31:2.27:0,2,652
chr10	18172938	.	CTCTCTT	C	2386.18	PASS	AB=0.931;AC=31;AF=0.554;AN=56;BaseQRankSum=-4.364;DP=463;FS=2.182;HRun=0;HaplotypeScore=106.1020;InbreedingCoeff=0.4602;MQ=50.25;MQ0=24;MQRankSum=3.177;QD=8.06;ReadPosRankSum=-6.059;VQSLOD=0.1839;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:20,0:19:43.88:44,0,257	0/0:3,0:3:2.97:0,3,20	0/1:20,0:6:5.62:6,0,25	0/1:28,0:7:0.43:19,0,0	0/0:28,0:28:37.84:0,38,635	1/1:15,0:15:17.78:167,18,0	1/1:8,0:6:8.99:76,9,0	1/1:20,0:14:13.16:227,13,0	1/1:10,0:10:21.20:223,21,0	0/0:26,0:25:20.33:0,20,1147	0/0:26,0:24:4.75:0,5,775	1/1:11,0:11:25.96:227,26,0	0/0:14,0:12:9.68:0,10,319	0/0:14,0:14:17.92:0,18,245	1/1:8,0:8:21.36:169,21,0	1/1:0,13:13:6.49:71,6,0	0/1:18,0:18:25.05:25,0,420	0/1:1,16:17:20.97:63,0,21	1/1:13,0:13:32.91:262,33,0	1/1:20,0:20:34.29:301,34,0	1/1:13,0:11:23.82:246,24,0	1/1:7,0:7:14.98:125,15,0	0/0:16,0:16:22.49:0,22,251	0/1:11,0:11:70.64:71,0,120	1/1:12,0:12:26.94:245,27,0	0/0:24,0:23:31.94:0,32,1093	0/0:16,0:16:14.90:0,15,224	0/1:32,0:30:17.84:18,0,603
chr10	18173256	.	T	TC	1024.86	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=0.545;DP=585;FS=1.481;HRun=7;HaplotypeScore=87.0486;InbreedingCoeff=0.9976;MQ=77.31;MQ0=0;MQRankSum=-2.625;QD=19.71;ReadPosRankSum=-0.775;VQSLOD=2.9875;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,34:38:58.29:986,58,0	0/0:8,0:8:24.04:0,24,232	0/0:23,0:22:29.30:0,29,440	0/0:28,0:26:52.52:0,53,480	0/0:27,0:27:69.11:0,69,664	0/0:16,0:16:42.07:0,42,405	0/0:18,0:18:54.01:0,54,495	0/0:27,0:27:57.05:0,57,535	1/1:1,0:14:31.63:161,32,0	0/0:33,0:33:87.12:0,87,835	0/0:15,0:15:39.06:0,39,377	0/0:17,0:17:51.06:0,51,486	0/0:24,0:24:63.09:0,63,603	0/0:21,0:21:60.08:0,60,573	0/0:19,0:19:48.06:0,48,463	0/0:27,0:27:66.11:0,66,637	0/0:27,0:27:78.09:0,78,746	0/0:13,0:13:36.04:0,36,348	0/0:23,0:23:60.09:0,60,580	0/0:17,0:17:48.08:0,48,463	0/0:29,0:29:81.11:0,81,777	0/0:19,0:19:57.08:0,57,545	0/0:12,0:12:33.02:0,33,306	0/0:21,0:21:57.04:0,57,541	0/0:13,0:13:30.02:0,30,282	0/0:23,0:23:69.11:0,69,666	0/0:23,0:23:66.11:0,66,637	0/0:10,0:10:30.05:0,30,287
chr10	18174011	.	T	TTGAC	21254.33	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=15.752;DP=642;FS=7.449;HRun=0;HaplotypeScore=113.6641;InbreedingCoeff=0.9997;MQ=86.37;MQ0=0;MQRankSum=-8.313;QD=66.84;ReadPosRankSum=-0.378;VQSLOD=6.5141;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,34:38:93.32:2481,93,0	0/0:11,0:11:33.11:0,33,627	0/0:28,0:28:69.24:0,69,1300	0/0:21,0:21:54.19:0,54,1011	0/0:40,0:40:99:0,114,2164	1/1:4,17:21:51.17:1375,51,0	1/1:7,10:17:33.11:888,33,0	1/1:8,12:22:57.18:1396,57,0	1/1:3,20:23:51.18:1376,51,0	0/0:34,0:34:99:0,99,1860	0/0:24,0:24:60.19:0,60,1109	1/1:1,17:18:54.19:1432,54,0	0/0:23,0:23:69.24:0,69,1310	0/0:14,0:14:42.14:0,42,760	1/1:1,21:22:57.20:1537,57,0	1/1:0,16:17:51.18:1358,51,0	0/0:28,0:28:78.27:0,78,1481	1/1:2,13:15:30.10:810,30,0	1/1:6,19:26:72.23:1810,72,0	1/1:5,17:22:60.21:1577,60,0	1/1:4,19:25:54.15:1426,54,0	1/1:3,24:28:78.27:2091,78,0	0/0:23,0:23:66.23:0,66,1253	0/0:18,0:18:51.17:0,51,969	1/1:2,20:24:63.22:1698,63,0	0/0:25,0:25:72.24:0,72,1333	0/0:26,0:26:72.22:0,72,1305	0/0:9,0:9:27.09:0,27,504
chr10	18177464	.	A	ACC	525.38	PASS	AB=1.000;AC=8;AF=0.148;AN=54;BaseQRankSum=3.460;DP=545;FS=0.589;HRun=5;HaplotypeScore=128.6281;InbreedingCoeff=0.5615;MQ=59.87;MQ0=24;MQRankSum=-1.441;QD=6.41;ReadPosRankSum=0.630;VQSLOD=-0.4166;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:29:13.55:0,14,87	0/1:9,0:9:5.61:6,0,89	0/0:37,0:16:13.22:0,13,275	0/0:42,0:25:55.92:0,56,504	0/0:22,0:22:35.76:0,36,276	0/0:14,0:14:10.76:0,11,84	0/0:20,0:20:24.37:0,24,190	1/1:26,0:25:3.88:278,4,0	0/0:7,0:8:13.75:0,14,104	0/0:18,0:16:28.31:0,28,270	0/0:20,0:20:24.37:0,24,185	0/0:10,0:10:12.45:0,12,109	0/1:22,0:22:1.24:1,0,193	0/0:22,0:22:16.59:0,17,272	0/0:11,0:11:4.25:0,4,113	0/0:9,0:8:8.29:0,8,67	0/0:27,0:25:28.43:0,28,233	0/0:12,0:12:11:0,11,159	1/1:15,0:14:31.46:251,31,0	1/1:5,5:8:14.83:121,15,0	./.	0/0:9,0:9:14.80:0,15,118	0/0:22,0:22:8.14:0,8,229	0/0:16,0:16:1.55:0,2,60	0/0:8,0:8:8.94:0,9,70	0/0:26,0:25:37.82:0,38,322	0/0:28,0:28:50.29:0,50,425	0/0:12,0:12:26.02:0,26,217
chr10	18177466	.	C	CCA	2505.18	PASS	AB=0.903;AC=38;AF=0.704;AN=54;BaseQRankSum=0.859;DP=497;FS=8.310;HRun=0;HaplotypeScore=96.2882;InbreedingCoeff=0.1599;MQ=68.20;MQ0=24;MQRankSum=-0.923;QD=7.18;ReadPosRankSum=-1.010;VQSLOD=2.3073;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:8,19:27:8.33:29,0,8	0/1:8,0:10:11.80:72,0,12	0/0:40,0:19:41.58:0,42,545	0/0:45,0:28:64.70:0,65,798	1/1:18,0:18:2.01:24,2,0	1/1:11,0:11:3.32:24,3,0	1/1:16,0:16:4.04:46,4,0	1/1:21,0:20:48.09:709,48,0	1/1:7,0:7:3.05:10,3,0	0/1:18,0:16:2.41:90,0,2	1/1:15,0:15:6.96:51,7,0	1/1:9,0:9:7.07:54,7,0	1/1:16,0:18:8.49:89,8,0	1/1:21,0:22:7.73:139,8,0	1/1:10,0:10:6.80:60,7,0	0/0:7,0:7:2.41:0,2,9	1/1:23,0:22:1.57:128,2,0	0/1:10,0:10:11.70:55,0,12	1/1:1,13:13:39.01:547,39,0	1/1:8,2:8:18.02:237,18,0	./.	0/1:9,0:9:16.53:39,0,17	1/1:21,0:21:1.89:83,2,0	1/1:11,0:12:5.34:49,5,0	0/0:9,0:9:0.79:0,1,2	0/1:25,0:24:9.48:85,0,9	1/1:23,0:23:3.66:34,4,0	0/0:10,0:10:1.07:0,1,3
chr10	18180239	.	A	ATTT	4082.67	PASS	AB=0.778;AC=27;AF=0.482;AN=56;BaseQRankSum=5.794;DP=487;FS=15.823;HRun=13;HaplotypeScore=98.9279;InbreedingCoeff=0.7865;MQ=69.34;MQ0=7;MQRankSum=-8.114;QD=15.41;ReadPosRankSum=-3.214;VQSLOD=-0.0313;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:21,0:31:16.82:17,0,68	0/0:7,0:7:18.02:0,18,194	0/1:21,0:16:0.20:0,0,94	0/0:12,0:11:9.31:0,9,122	0/0:32,0:35:56.41:0,56,579	1/1:10,0:23:39.07:501,39,0	1/1:7,0:7:11.89:104,12,0	1/1:17,12:30:51.01:656,51,0	1/1:7,0:15:11.26:43,11,0	0/0:21,0:21:32.68:0,33,339	0/0:21,0:23:43.32:0,43,466	1/1:5,0:9:11.03:113,11,0	0/0:14,0:15:30.61:0,31,325	0/0:11,0:11:30.04:0,30,322	1/1:6,0:9:11.03:107,11,0	1/1:9,0:11:25.47:253,25,0	0/0:29,0:28:62.93:0,63,670	1/1:6,0:12:14.29:217,14,0	1/1:10,9:24:48.02:608,48,0	1/1:8,8:20:43.32:556,43,0	0/1:3,6:7:23.14:95,0,23	1/1:8,0:11:22.56:260,23,0	0/0:10,0:11:19.38:0,19,223	0/0:15,0:15:26.98:0,27,290	1/1:9,0:26:45:552,45,0	0/0:14,0:16:26.73:0,27,261	0/0:16,0:17:32.22:0,32,321	0/0:8,0:8:14.73:0,15,149
chr10	18181228	.	C	CAT	2894.69	PASS	AB=0.600;AC=21;AF=0.404;AN=52;BaseQRankSum=-10.896;DP=276;FS=3.588;HRun=0;HaplotypeScore=49.9409;InbreedingCoeff=0.7927;MQ=67.00;MQ0=3;MQRankSum=0.817;QD=28.66;ReadPosRankSum=4.328;VQSLOD=4.7122;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:30.10:0,30,381	1/1:0,3:3:6.02:101,6,0	0/0:4,0:4:5.50:0,6,47	./.	1/1:5,12:17:24.08:401,24,0	0/0:19,0:19:48.11:0,48,593	0/0:7,0:7:12.03:0,12,139	0/0:33,0:33:75.24:0,75,955	0/0:4,0:4:12.04:0,12,153	1/1:3,5:8:12.04:195,12,0	1/1:0,2:2:3.01:47,3,0	0/0:9,0:9:18.04:0,18,214	1/1:1,4:5:9.03:151,9,0	1/1:2,4:5:9.03:150,9,0	0/0:10,0:10:27.07:0,27,330	0/0:11,0:11:33.09:0,33,407	1/1:3,16:19:42.14:703,42,0	0/0:11,0:11:24.08:0,24,305	0/0:16,0:16:39.11:0,39,476	0/0:11,0:11:30.08:0,30,369	0/0:7,0:7:12.04:0,12,153	0/0:4,0:4:3.01:0,3,38	0/1:2,4:6:13.02:138,0,13	./.	0/0:12,0:12:36.12:0,36,458	1/1:3,13:16:39.13:653,39,0	1/1:2,8:10:21.07:351,21,0	1/1:3,6:7:12.04:201,12,0
chr10	18181247	.	GTATA	G	2516.78	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=-5.397;DP=262;FS=8.510;HRun=0;HaplotypeScore=57.3511;InbreedingCoeff=0.7633;MQ=68.21;MQ0=1;MQRankSum=0.322;QD=26.49;ReadPosRankSum=4.823;VQSLOD=1.7817;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:39.13:0,39,918	0/0:3,0:3:0:0,0,0	0/0:7,0:3:0:0,0,0	0/1:12,0:5:0.82:1,0,43	0/0:8,0:8:18.04:0,18,404	1/1:2,15:17:36.12:626,36,0	1/1:0,7:7:15.05:261,15,0	0/0:10,0:33:71.25:0,71,389	1/1:2,3:5:6.02:104,6,0	0/0:2,0:2:6.01:0,6,104	0/0:3,0:3:6.02:0,6,146	1/1:0,6:6:12.04:208,12,0	0/0:6,0:6:15.05:0,15,376	0/0:6,0:6:15.05:0,15,369	1/1:4,5:9:12.04:208,12,0	1/1:1,9:10:27.09:469,27,0	0/0:18,0:18:48.16:0,48,1218	1/1:2,10:12:18.02:281,18,0	0/0:2,0:14:31.15:0,31,159	0/0:2,0:11:22.53:0,23,107	0/0:2,0:6:8.39:0,8,38	1/1:2,0:2:3:27,3,0	0/0:3,0:3:5.84:0,6,152	0/0:1,0:1:3.01:0,3,76	1/1:1,14:15:30.10:521,30,0	0/0:14,0:14:27.09:0,27,680	0/0:10,0:10:18.05:0,18,402	0/0:9,0:8:21.07:0,21,504
chr10	18181888	.	CG	C	3215.66	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=7.833;DP=518;FS=1.479;HRun=6;HaplotypeScore=67.6038;InbreedingCoeff=0.9107;MQ=62.50;MQ0=34;MQRankSum=-5.043;QD=12.56;ReadPosRankSum=0.111;VQSLOD=2.3615;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:18,11:28:45.99:556,46,0	0/0:11,0:11:17.55:0,18,163	0/0:59,0:15:20.03:0,20,208	0/1:48,0:18:4.35:4,0,95	0/0:20,0:20:51:0,51,598	1/1:9,10:17:41.69:395,42,0	1/1:7,5:11:14.72:113,15,0	1/1:16,1:16:16.63:163,17,0	1/1:4,7:11:14.03:215,14,0	0/0:26,0:24:60.10:0,60,679	0/0:14,0:12:16.53:0,17,246	1/1:4,2:5:6:57,6,0	0/0:18,0:18:39.10:0,39,481	0/0:19,0:19:32.51:0,33,376	1/1:6,7:13:33.07:344,33,0	1/1:8,1:7:15.03:152,15,0	0/0:26,0:26:72.16:0,72,881	1/1:20,5:22:38.32:405,38,0	1/1:16,3:14:24.02:226,24,0	1/1:6,7:12:23.96:224,24,0	1/1:6,2:7:8.92:69,9,0	1/1:5,5:10:26.74:228,27,0	0/0:9,0:9:18.04:0,18,218	0/0:14,0:13:30.03:0,30,346	1/1:0,15:15:27.07:288,27,0	0/0:24,0:23:60.78:0,61,704	0/0:12,0:12:32.93:0,33,345	0/0:10,0:10:27.07:0,27,339
chr10	18181910	.	G	GA	4136.03	PASS	AB=0.833;AC=26;AF=0.464;AN=56;BaseQRankSum=1.988;DP=538;FS=5.165;HRun=10;HaplotypeScore=70.9081;InbreedingCoeff=0.7327;MQ=67.95;MQ0=21;MQRankSum=-2.485;QD=12.97;ReadPosRankSum=-1.220;VQSLOD=3.3344;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:12,14:25:51.08:524,51,0	0/0:8,0:8:20.98:0,21,172	0/1:65,0:24:5.11:5,0,128	0/1:48,1:19:7.89:8,0,35	0/0:27,0:27:62.89:0,63,516	1/1:10,8:17:8.28:277,8,0	0/1:5,6:10:9.61:113,0,10	1/1:3,24:27:65.87:672,66,0	0/1:7,5:12:3.59:171,0,4	0/0:22,0:22:53.93:0,54,443	0/0:19,1:19:28.21:0,28,343	1/1:3,7:9:21.04:217,21,0	0/0:14,0:15:28.98:0,29,227	0/0:12,0:12:22.81:0,23,195	1/1:5,8:13:33.08:351,33,0	1/1:6,5:9:21.05:223,21,0	0/0:25,0:25:65.90:0,66,541	1/1:13,13:23:29.49:510,29,0	1/1:8,12:18:23.49:455,23,0	1/1:5,13:18:32.45:326,32,0	1/1:3,2:5:9.02:92,9,0	1/1:0,7:7:18.05:192,18,0	0/0:10,0:10:14.56:0,15,123	0/0:13,0:12:23.96:0,24,197	0/0:18,1:19:6.97:0,7,264	0/0:20,0:21:52.97:0,53,424	0/0:13,0:13:29.94:0,30,246	0/0:13,0:13:32.94:0,33,270
chr10	18182663	.	C	CA	5079.61	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=-8.655;DP=501;FS=0.370;HRun=10;HaplotypeScore=56.6358;InbreedingCoeff=0.8696;MQ=85.45;MQ0=1;MQRankSum=0.754;QD=19.84;ReadPosRankSum=-1.600;VQSLOD=5.0248;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,1:18:42.65:214,43,0	0/0:8,0:8:20.95:0,21,170	0/1:27,0:25:15.17:15,0,133	0/0:23,0:19:13.40:0,13,186	0/0:22,3:25:24.90:0,25,411	1/1:2,15:17:33.08:352,33,0	1/1:1,8:9:21.05:224,21,0	1/1:6,14:21:3.18:408,3,0	1/1:1,1:12:25.57:128,26,0	0/0:16,0:16:35.95:0,36,294	0/0:24,0:24:59.87:0,60,484	1/1:2,16:18:45.11:480,45,0	0/0:19,0:19:53.92:0,54,443	0/0:18,0:18:44.91:0,45,366	1/1:1,10:11:30.07:319,30,0	1/1:3,12:16:32.91:334,33,0	0/0:13,1:14:0.93:0,1,214	1/1:4,14:18:39.09:411,39,0	1/1:1,17:18:51.10:533,51,0	1/1:3,13:16:36.03:369,36,0	1/1:1,9:10:21.05:224,21,0	1/1:2,14:16:39.10:415,39,0	0/0:21,0:21:44.91:0,45,369	0/0:19,0:19:41.92:0,42,341	1/1:3,24:28:62.99:654,63,0	0/0:20,0:20:56.93:0,57,468	0/0:28,0:29:61.93:0,62,498	0/0:8,0:8:23.97:0,24,197
chr10	18184592	.	TA	T	2913.27	PASS	AB=1.000;AC=25;AF=0.446;AN=56;BaseQRankSum=5.633;DP=483;FS=1.374;HRun=12;HaplotypeScore=47.0069;InbreedingCoeff=0.8826;MQ=59.78;MQ0=28;MQRankSum=-0.252;QD=13.55;ReadPosRankSum=0.955;VQSLOD=3.7686;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,1:26:48.10:0,48,487	0/0:5,0:5:12.02:0,12,122	0/0:9,0:5:9.01:0,9,87	0/0:6,0:5:6.15:0,6,42	0/0:37,1:36:69.76:0,70,866	1/1:5,15:19:41.83:325,42,0	1/1:2,4:5:11.94:93,12,0	1/1:11,26:30:74.64:576,75,0	0/0:7,0:6:15.03:0,15,152	0/0:20,0:17:33.07:0,33,335	0/0:16,1:15:12:0,12,336	1/1:5,9:14:26.89:209,27,0	0/0:18,1:17:39.08:0,39,396	0/0:22,0:19:41.97:0,42,404	1/1:1,9:9:20.92:162,21,0	1/1:4,11:13:29.89:232,30,0	0/0:40,0:38:98.59:0,99,946	1/1:5,25:30:62.74:487,63,0	1/1:7,16:21:14.24:330,14,0	1/1:7,15:19:35.83:279,36,0	1/1:1,5:5:11.95:93,12,0	1/1:1,3:3:8.92:65,9,0	0/0:4,0:3:6.01:0,6,61	0/1:11,0:8:3.02:3,0,126	1/1:2,15:16:35.86:279,36,0	0/0:26,1:25:24.91:0,25,416	0/0:15,0:12:30.06:0,30,302	0/0:10,0:9:18.04:0,18,183
chr10	18195840	.	CT	C	938.91	PASS	AB=0.734;AC=19;AF=0.352;AN=54;BaseQRankSum=-2.385;DP=382;FS=5.846;HRun=17;HaplotypeScore=53.0104;InbreedingCoeff=0.1412;MQ=59.49;MQ0=20;MQRankSum=0.257;QD=4.33;ReadPosRankSum=2.124;VQSLOD=0.7680;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:25:0:0,0,0	0/1:7,2:11:8.19:45,0,8	0/0:19,0:7:4.99:0,5,26	0/1:18,0:12:9.13:9,0,29	0/1:13,12:24:22.93:87,0,23	./.	0/0:10,0:9:0:0,0,0	0/0:12,0:12:0.94:0,1,2	0/0:9,0:7:0.94:0,1,2	0/1:12,9:22:17.06:108,0,17	1/1:5,5:16:26.64:116,27,0	0/0:8,0:8:0:0,0,0	1/1:10,3:13:10.79:66,11,0	1/1:7,3:10:8.20:49,8,0	0/0:7,0:7:0.94:0,1,2	0/0:14,0:14:0:0,0,0	0/1:19,9:27:11.48:187,0,11	0/0:10,0:9:2.88:0,3,15	0/0:8,0:7:0:0,0,0	0/0:14,0:13:0.47:0,0,1	0/0:6,0:6:0:0,0,0	0/0:6,0:6:0:0,0,0	1/1:7,5:14:12.70:62,13,0	1/1:12,4:16:19.65:107,20,0	0/0:8,0:8:0:0,0,0	0/1:7,5:13:23.01:39,0,23	0/1:7,7:15:6.67:65,0,7	1/1:7,6:9:22.48:122,22,0
chr10	18195942	.	C	CTT	2920.78	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=12.290;DP=396;FS=8.143;HRun=2;HaplotypeScore=124.4467;InbreedingCoeff=0.9659;MQ=59.28;MQ0=16;MQRankSum=-11.867;QD=24.96;ReadPosRankSum=-5.339;VQSLOD=0.2575;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:22:56.79:522,57,0	0/0:10,0:10:30.10:0,30,442	0/0:19,0:11:33.11:0,33,469	0/0:15,0:7:20.25:0,20,235	0/0:21,0:21:60.19:0,60,863	1/1:4,0:4:11.93:124,12,0	1/1:5,0:5:14.58:116,15,0	1/1:12,0:12:21.54:362,22,0	1/1:5,0:5:14.97:147,15,0	0/0:21,0:20:57.19:0,57,839	0/0:16,0:16:42.14:0,42,618	1/1:4,0:4:11.96:128,12,0	0/0:20,0:20:60.19:0,60,862	0/0:13,0:13:39.13:0,39,574	1/1:7,0:7:20.97:208,21,0	1/1:7,0:7:21:231,21,0	0/0:38,0:37:99:0,105,1517	1/1:10,0:8:20.88:240,21,0	1/1:10,3:11:30.08:408,30,0	1/1:6,0:6:17.90:149,18,0	1/1:1,2:4:5.98:76,6,0	1/1:5,2:7:14.90:152,15,0	0/0:16,0:16:42.14:0,42,618	0/0:27,0:26:78.25:0,78,1128	1/1:11,0:11:32.85:287,33,0	0/0:25,0:25:75.25:0,75,1103	0/0:25,0:24:63.21:0,63,928	0/0:13,0:11:33.11:0,33,486
chr10	18196581	.	G	GAAA	5303.89	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-1.565;DP=497;FS=20.598;HRun=11;HaplotypeScore=79.2034;InbreedingCoeff=0.9256;MQ=55.05;MQ0=4;MQRankSum=-3.465;QD=23.16;ReadPosRankSum=-2.910;VQSLOD=1.2033;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:37:73.55:0,74,894	0/0:8,0:9:24.87:0,25,253	0/0:6,0:4:4.78:0,5,53	0/0:4,0:3:5.60:0,6,70	0/0:25,0:25:55.41:0,55,663	1/1:6,17:25:39.60:663,40,0	1/1:10,16:27:27.07:475,27,0	1/1:24,12:37:70.18:976,70,0	0/0:11,0:12:22.59:0,23,275	0/0:23,0:23:54.05:0,54,629	0/0:22,0:22:53.74:0,54,584	1/1:18,4:23:44.83:645,45,0	0/0:25,0:26:44.37:0,44,510	0/0:17,0:18:38.97:0,39,438	1/1:4,9:13:17.94:286,18,0	1/1:8,11:19:12.04:226,12,0	0/0:19,0:18:42.05:0,42,476	1/1:9,8:17:29.39:415,29,0	1/1:8,14:23:39.06:613,39,0	1/1:10,4:16:37.57:485,38,0	1/1:2,6:8:12.04:206,12,0	1/1:2,2:4:7.58:117,8,0	0/0:10,0:10:26.89:0,27,294	0/0:16,0:16:33.07:0,33,385	1/1:7,7:14:12.04:196,12,0	0/0:14,0:15:38.72:0,39,405	0/0:20,0:20:48:0,48,541	0/0:4,0:4:5.96:0,6,70
chr10	18197903	.	AAG	A	1045.36	PASS	AB=0.973;AC=21;AF=0.375;AN=56;BaseQRankSum=5.112;DP=561;FS=1.592;HRun=0;HaplotypeScore=102.4580;InbreedingCoeff=-0.2338;MQ=72.71;MQ0=6;MQRankSum=1.707;QD=2.65;ReadPosRankSum=5.185;VQSLOD=1.7942;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:15.25:0,15,285	0/0:5,0:5:10.43:0,10,83	0/0:43,0:19:42.13:0,42,462	0/1:33,0:16:13.49:13,0,137	0/0:27,0:27:36.34:0,36,345	0/1:16,0:16:38.29:38,0,47	0/1:24,0:24:1.16:100,0,1	0/1:25,0:27:70.38:70,0,125	0/0:14,0:14:9.81:0,10,129	0/1:19,0:19:86.11:86,0,145	0/1:20,1:21:45.43:45,0,168	0/1:14,0:14:6.83:47,0,7	0/0:15,0:15:36.24:0,36,254	0/1:19,1:20:3.06:3,0,106	0/1:31,0:32:65.69:66,0,181	1/1:25,0:25:21.23:133,21,0	0/1:17,3:20:99:123,0,100	0/1:23,0:24:24.47:97,0,24	0/1:14,0:14:35.69:36,0,45	0/1:15,0:16:62.25:62,0,101	0/1:14,0:14:32.11:32,0,48	0/1:14,0:14:25.94:58,0,26	0/0:19,0:19:50.89:0,51,623	0/0:12,0:12:23.22:0,23,134	1/1:16,0:16:20.37:81,20,0	0/1:19,0:18:41.11:41,0,106	0/1:23,2:25:80.45:80,0,151	0/0:8,0:8:8.88:0,9,29
chr10	18197904	.	AGG	A	4705.28	PASS	AB=0.724;AC=25;AF=0.446;AN=56;BaseQRankSum=-9.427;DP=557;FS=7.608;HRun=10;HaplotypeScore=91.7234;InbreedingCoeff=0.6315;MQ=72.79;MQ0=6;MQRankSum=0.852;QD=15.08;ReadPosRankSum=1.718;VQSLOD=3.1252;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:24:35.66:0,36,223	0/0:3,0:5:10.72:0,11,82	0/0:43,0:19:29.75:0,30,376	0/1:33,0:16:32.91:33,0,60	0/0:15,0:27:29.01:0,29,122	1/1:3,13:16:27.06:301,27,0	1/1:2,22:24:60.14:662,60,0	0/1:14,11:26:6.53:339,0,7	0/0:12,0:14:22.55:0,23,120	0/0:9,0:19:20.12:0,20,124	0/0:7,0:20:9.78:0,10,121	1/1:5,9:14:18.04:200,18,0	0/0:13,0:15:23.79:0,24,160	0/0:9,0:20:16.55:0,17,90	1/1:15,16:31:54.08:586,54,0	1/1:4,21:25:57.15:633,57,0	0/1:9,0:20:26.24:26,0,79	1/1:5,19:24:51.09:558,51,0	1/1:3,11:14:33.09:367,33,0	0/1:7,8:16:9.67:182,0,10	1/1:4,10:14:21.10:263,21,0	1/1:3,11:14:24.05:260,24,0	0/0:18,0:19:36.12:0,36,542	0/0:6,0:12:11.98:0,12,41	1/1:2,14:16:26.44:275,26,0	0/0:4,0:18:25.24:0,25,97	0/1:10,0:24:20.53:21,0,38	0/0:0,0:8:9.49:0,9,33
chr10	18197913	.	GGT	G	1290.70	PASS	AB=0.975;AC=20;AF=0.357;AN=56;BaseQRankSum=3.550;DP=506;FS=26.466;HRun=0;HaplotypeScore=93.2302;InbreedingCoeff=0.4591;MQ=72.74;MQ0=2;MQRankSum=0.058;QD=5.40;ReadPosRankSum=6.576;VQSLOD=1.1093;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:49.45:0,49,438	0/0:6,0:6:14.46:0,14,118	0/0:28,0:16:16.79:0,17,311	0/1:20,0:10:7.97:8,0,126	0/0:17,0:17:22.51:0,23,184	1/1:13,0:13:22.81:91,23,0	1/1:24,0:24:12.77:187,13,0	0/1:24,0:24:30.41:30,0,253	0/0:14,0:14:19.43:0,19,184	0/0:19,0:19:23.40:0,23,256	0/0:20,0:20:47.22:0,47,340	0/1:14,3:17:45.11:89,0,45	0/0:13,0:13:29.22:0,29,247	0/0:20,0:20:41.35:0,41,229	1/1:18,3:21:45.35:271,45,0	1/1:23,2:25:8.02:199,8,0	0/0:18,0:18:19.98:0,20,186	1/1:20,1:21:44.76:245,45,0	0/1:17,0:17:75.65:76,0,100	0/1:16,0:16:44.89:45,0,143	0/1:13,0:13:50.73:58,0,51	1/1:12,0:12:0.07:95,0,0	0/0:17,0:17:39.10:0,39,592	0/0:13,0:13:25.76:0,26,166	1/1:15,1:16:7.05:85,7,0	0/0:23,0:22:62.57:0,63,408	0/0:23,0:23:34.05:0,34,192	0/0:12,0:12:23.58:0,24,159
chr10	18199673	.	A	AG	1548.86	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-7.420;DP=524;FS=5.880;HRun=0;HaplotypeScore=59.2345;InbreedingCoeff=0.9413;MQ=65.38;MQ0=1;MQRankSum=-0.033;QD=32.27;ReadPosRankSum=2.006;VQSLOD=3.0436;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,37:37:93.31:1327,93,0	0/0:9,0:9:27.05:0,27,338	0/0:10,0:8:11.24:0,11,163	0/0:5,0:4:10.12:0,10,62	0/0:30,0:30:84.25:0,84,1124	0/0:26,0:26:78.16:0,78,1033	0/0:6,0:6:18.04:0,18,233	0/0:40,0:40:99:0,115,1463	1/1:0,11:11:24.08:342,24,0	0/0:23,0:23:63.20:0,63,851	0/0:20,0:20:59.98:0,60,794	0/0:26,0:26:78.20:0,78,1005	0/0:26,0:26:71.07:0,71,1001	0/0:21,0:21:60.16:0,60,774	0/0:20,0:20:57.13:0,57,730	0/0:19,0:19:57.16:0,57,737	0/0:14,0:14:39.10:0,39,524	0/0:22,0:22:60.17:0,60,815	0/0:19,0:19:57.16:0,57,762	0/0:25,0:25:75.22:0,75,996	0/0:10,0:10:30.08:0,30,400	0/0:6,0:6:18.04:0,18,218	0/0:14,0:14:42.14:0,42,586	0/0:5,0:5:15.03:0,15,176	0/0:17,0:17:51.15:0,51,668	0/0:30,0:30:87.27:0,87,1164	0/0:24,0:24:64.26:0,64,956	0/0:9,0:9:27.09:0,27,377
chr10	18199945	.	TTTTA	T	445.95	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=-0.625;DP=605;FS=0.543;HRun=0;HaplotypeScore=115.6557;InbreedingCoeff=0.2618;MQ=77.11;MQ0=1;MQRankSum=-0.619;QD=2.91;ReadPosRankSum=-3.776;VQSLOD=0.9315;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:29,2:31:11.44:134,11,0	0/0:6,0:6:15:0,15,263	0/0:27,0:22:47.16:0,47,623	0/0:18,0:8:11.75:0,12,250	0/0:32,0:32:93.11:0,93,1799	0/0:18,0:18:1.24:0,1,511	0/1:20,0:20:15.01:15,0,497	0/1:37,0:37:99:114,0,870	1/1:18,2:20:22.10:192,22,0	0/0:26,0:25:73.92:0,74,1286	0/0:19,0:19:54.17:0,54,1092	0/0:21,0:21:11.34:0,11,638	0/0:26,0:26:26.81:0,27,424	0/0:25,0:24:47.06:0,47,698	0/0:31,0:31:89.77:0,90,1069	0/0:24,0:24:11.88:0,12,717	0/0:19,0:19:42.08:0,42,765	0/1:14,0:14:16.44:16,0,274	0/0:17,0:17:25.58:0,26,615	0/1:15,0:15:61.65:62,0,264	0/0:11,0:11:3.75:0,4,325	0/1:16,0:16:60.26:60,0,420	0/0:15,0:15:36.10:0,36,672	0/0:19,0:19:42.11:0,42,815	0/0:21,0:21:42.54:0,43,396	0/0:34,0:34:99:0,102,1833	0/0:32,0:31:60.18:0,60,1194	0/0:11,0:11:18.06:0,18,350
chr10	18199946	.	TTTA	T	1176.85	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=-4.196;DP=603;FS=0.472;HRun=0;HaplotypeScore=102.7050;InbreedingCoeff=0.0581;MQ=77.32;MQ0=1;MQRankSum=-1.647;QD=4.80;ReadPosRankSum=-3.578;VQSLOD=0.9155;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:2,27:29:32.93:435,33,0	0/0:6,0:6:15:0,15,206	0/0:26,0:21:43.99:0,44,484	0/0:19,0:9:14.67:0,15,233	0/0:32,0:32:86.14:0,86,1430	0/1:19,0:19:46.58:47,0,297	0/1:20,0:20:32.67:33,0,287	0/1:37,0:37:99:202,0,532	1/1:2,17:19:27.07:351,27,0	0/0:26,0:25:69.76:0,70,988	0/0:17,0:17:51.15:0,51,839	0/0:21,0:21:3.08:0,3,415	0/0:27,0:27:30:0,30,366	0/0:24,0:23:40.26:0,40,546	0/1:34,0:34:13.55:14,0,566	0/1:25,0:25:18.50:18,0,457	0/0:19,0:19:39.09:0,39,588	0/1:12,0:12:22.81:23,0,148	0/0:16,0:16:14.46:0,14,359	0/1:14,0:14:99:138,0,118	0/0:12,0:12:1.17:0,1,201	0/1:15,0:15:64.88:65,0,268	0/0:15,0:15:33.08:0,33,508	0/0:19,0:19:42.11:0,42,649	0/1:21,0:21:14.76:15,0,167	0/0:36,0:36:99:0,105,1486	0/0:32,0:31:60.12:0,60,936	0/0:11,0:11:18.04:0,18,262
chr10	18199948	.	TA	T	3073.17	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-2.852;DP=578;FS=18.437;HRun=3;HaplotypeScore=77.8897;InbreedingCoeff=0.9510;MQ=78.26;MQ0=0;MQRankSum=-0.987;QD=10.60;ReadPosRankSum=-0.800;VQSLOD=0.3345;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:29:32.33:198,32,0	0/0:6,0:6:14.22:0,14,91	0/0:25,0:21:26.57:0,27,226	0/0:17,0:9:13.31:0,13,120	0/0:31,0:31:87.39:0,87,806	1/1:19,1:20:35.50:254,35,0	1/1:19,2:21:29.73:278,30,0	1/1:33,0:33:53.42:429,53,0	1/1:19,0:19:23.43:143,23,0	0/0:24,0:24:59.93:0,60,543	0/0:16,0:16:35.36:0,35,322	1/1:21,1:22:22.39:244,22,0	0/0:23,0:23:23.29:0,23,175	0/0:21,0:21:32.96:0,33,292	1/1:33,0:33:41.87:360,42,0	1/1:22,2:24:36.28:298,36,0	0/0:19,0:19:38.32:0,38,322	1/1:9,1:10:15.48:145,15,0	1/1:14,0:14:1.91:47,2,0	1/1:14,1:15:31.41:264,31,0	1/1:10,1:11:8.82:98,9,0	1/1:17,1:18:29.24:271,29,0	0/0:14,0:14:28.23:0,28,247	0/0:19,0:19:38.77:0,39,301	1/1:21,0:21:35.35:270,35,0	0/0:33,0:33:76.51:0,77,696	0/0:31,0:30:55.65:0,56,486	0/0:9,0:9:13.22:0,13,100
chr10	18200187	.	GT	G	6515.29	PASS	AB=0.925;AC=26;AF=0.464;AN=56;BaseQRankSum=8.566;DP=685;FS=0.993;HRun=8;HaplotypeScore=74.9609;InbreedingCoeff=0.8680;MQ=75.28;MQ0=1;MQRankSum=0.293;QD=19.57;ReadPosRankSum=2.903;VQSLOD=4.9136;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:59.24:0,59,475	0/1:9,1:10:4.92:5,0,196	0/0:20,0:20:12.81:0,13,143	0/1:15,0:15:51.31:51,0,129	0/0:25,0:24:66.16:0,66,755	1/1:2,23:25:51.08:492,51,0	1/1:0,23:23:57.09:550,57,0	1/1:5,17:22:50.99:463,51,0	0/0:33,0:32:72.36:0,72,596	0/0:17,0:17:51.14:0,51,598	0/0:21,0:21:60.16:0,60,698	1/1:2,26:28:66.09:633,66,0	0/0:39,0:41:99:0,114,1249	0/0:22,0:22:56.97:0,57,641	1/1:4,33:37:90.06:857,90,0	1/1:3,19:22:45.07:434,45,0	0/0:35,0:35:96.24:0,96,1116	1/1:2,24:26:59.93:554,60,0	1/1:4,17:21:51.01:469,51,0	1/1:6,12:18:33.05:318,33,0	1/1:2,27:29:54.60:571,55,0	1/1:2,22:24:45.06:434,45,0	0/0:22,0:22:54.15:0,54,640	0/0:28,0:28:75.11:0,75,852	1/1:3,29:32:72.03:683,72,0	0/0:28,0:28:71.97:0,72,808	0/0:29,0:29:72.13:0,72,789	0/0:7,0:7:15.02:0,15,167
chr10	18200195	.	T	TGG	754.11	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-2.592;DP=687;FS=0.000;HRun=9;HaplotypeScore=111.6494;InbreedingCoeff=0.9034;MQ=79.27;MQ0=2;MQRankSum=1.816;QD=13.23;ReadPosRankSum=-1.426;VQSLOD=1.1881;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:22:5.07:84,5,0	0/0:8,0:8:18:0,18,173	0/0:27,0:26:27.03:0,27,252	0/0:17,0:16:10.30:0,10,151	0/0:24,0:23:63.12:0,63,654	0/0:28,0:28:65.75:0,66,537	0/0:27,0:27:65.66:0,66,510	0/0:20,0:20:41.78:0,42,331	1/1:8,26:34:51.17:781,51,0	0/0:21,0:21:54.12:0,54,573	0/0:21,0:21:60.15:0,60,639	0/0:29,0:29:74.24:0,74,569	0/0:40,0:40:96.16:0,96,1007	0/0:21,0:21:58.03:0,58,608	0/0:37,0:37:95.35:0,95,722	0/0:21,0:21:50.76:0,51,398	0/0:33,0:33:87.19:0,87,926	0/0:26,0:26:59.32:0,59,423	0/0:20,0:20:50.75:0,51,405	0/0:14,0:14:35.71:0,36,259	0/0:29,0:29:65.62:0,66,496	0/0:24,0:24:47.74:0,48,365	0/0:21,0:22:50.20:0,50,596	0/0:27,0:27:69.15:0,69,734	0/0:31,0:31:74.44:0,74,550	0/0:28,0:28:66.11:0,66,690	0/0:27,0:27:63.12:0,63,661	0/0:7,0:7:21.05:0,21,222
chr10	18201333	.	G	GCAA	11837.80	PASS	AB=1.000;AC=27;AF=0.482;AN=56;BaseQRankSum=17.941;DP=1241;FS=3.893;HRun=0;HaplotypeScore=228.7910;InbreedingCoeff=0.8845;MQ=46.76;MQ0=32;MQRankSum=-9.295;QD=18.47;ReadPosRankSum=-2.387;VQSLOD=4.1425;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:27,2:20:11.58:94,12,0	0/0:13,0:13:21.85:0,22,365	0/0:46,0:11:29.92:0,30,330	0/0:58,0:15:8.08:0,8,294	0/0:34,0:32:56.88:0,57,761	1/1:32,0:28:57.77:721,58,0	1/1:53,0:49:47.91:929,48,0	1/1:37,0:28:57.09:796,57,0	1/1:44,15:51:72.48:803,72,0	0/0:51,0:51:99:0,120,1740	0/0:12,0:12:26.40:0,26,305	1/1:61,0:57:89.85:1259,90,0	0/0:64,0:61:99:0,159,2266	0/0:71,0:71:99:0,168,2375	1/1:92,0:85:99:1866,112,0	1/1:81,1:72:99:2201,165,0	0/0:44,0:43:99:0,111,1595	1/1:26,0:22:30.89:402,31,0	0/1:21,0:19:17.49:257,0,17	1/1:23,0:21:39.21:510,39,0	1/1:54,0:54:58:706,58,0	1/1:30,0:27:52.54:585,53,0	0/0:25,0:25:53.94:0,54,716	0/0:85,0:85:99:0,187,2926	1/1:34,0:31:1.40:708,1,0	0/0:40,0:37:72.16:0,72,995	0/0:39,0:39:99:0,101,1421	0/0:17,0:17:42.14:0,42,598
chr10	18201338	.	A	AACG	11287.31	PASS	AB=0.825;AC=18;AF=0.321;AN=56;BaseQRankSum=5.447;DP=1231;FS=0.000;HRun=0;HaplotypeScore=218.9326;InbreedingCoeff=0.2198;MQ=46.17;MQ0=33;MQRankSum=-7.518;QD=18.03;ReadPosRankSum=0.507;VQSLOD=4.0051;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:17:0.39:0,0,76	0/0:14,0:14:41.87:0,42,577	0/0:51,0:11:29.99:0,30,420	0/0:57,0:15:30.71:0,31,448	0/0:29,0:27:72.16:0,72,1055	1/1:15,14:26:10.25:651,10,0	1/1:16,33:49:3.38:981,3,0	1/1:9,29:29:57.22:1242,57,0	0/1:59,0:51:99:308,0,135	0/0:52,0:52:99:0,138,2208	0/0:14,0:14:33.09:0,33,483	0/1:29,31:55:13.10:1428,0,13	0/0:64,0:61:99:0,178,2823	0/0:75,0:75:99:0,199,3091	0/1:66,29:87:84.75:1819,0,85	1/1:46,35:70:45.32:2179,45,0	0/0:44,0:43:99:0,119,1972	0/1:18,8:21:1.13:441,0,1	0/1:19,3:20:99:201,0,132	0/1:12,7:17:17.53:450,0,18	0/1:46,9:51:99:693,0,101	0/1:19,9:25:26:420,0,26	0/0:25,0:25:63.39:0,63,960	0/0:86,0:86:99:0,245,3787	0/1:27,7:30:99:475,0,143	0/0:39,0:36:99:0,102,1475	0/0:36,0:36:99:0,108,1735	0/0:19,0:19:51.13:0,51,785
chr10	18201374	.	GACA	G	694.93	PASS	AB=0.955;AC=3;AF=0.054;AN=56;BaseQRankSum=5.047;DP=1130;FS=0.736;HRun=0;HaplotypeScore=239.5219;InbreedingCoeff=0.6328;MQ=45.76;MQ0=18;MQRankSum=-5.941;QD=9.65;ReadPosRankSum=2.388;VQSLOD=3.1541;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:20,1:18:39.07:73,0,39	0/0:14,0:14:35.77:0,36,558	0/0:35,0:5:14.78:0,15,157	0/0:44,0:10:20.81:0,21,165	0/0:33,0:33:81.72:0,82,1559	0/0:23,0:22:29.87:0,30,326	0/0:41,1:37:26.05:0,26,350	0/0:41,0:35:82.76:0,83,1226	1/1:25,26:43:21.29:726,21,0	0/0:56,0:54:99:0,147,2680	0/0:17,0:17:35.78:0,36,648	0/0:59,0:55:86.47:0,86,781	0/0:53,1:53:94.18:0,94,2387	0/0:74,0:73:99:0,207,3670	0/0:80,0:76:99:0,145,1443	0/0:79,1:72:76.70:0,77,1094	0/0:46,0:45:89.45:0,89,2115	0/0:24,0:21:37.51:0,38,479	0/0:16,0:15:38.52:0,39,463	0/0:22,0:19:27.85:0,28,277	0/0:53,0:46:71.37:0,71,831	0/0:19,0:18:25.65:0,26,284	0/0:16,0:16:48.14:0,48,831	0/0:92,0:88:99:0,216,3984	0/0:26,0:25:47.91:0,48,489	0/0:32,0:29:78.09:0,78,1435	0/0:35,0:35:99:0,102,1924	0/0:25,0:25:69.22:0,69,1328
chr10	18201384	.	GCAACAA	G	8780.91	PASS	AB=0.865;AC=21;AF=0.375;AN=56;BaseQRankSum=12.809;DP=1090;FS=0.974;HRun=0;HaplotypeScore=259.1791;InbreedingCoeff=0.4231;MQ=45.66;MQ0=26;MQRankSum=-9.484;QD=17.08;ReadPosRankSum=-1.412;VQSLOD=3.6615;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:20:30.12:79,0,30	0/0:15,0:14:30.10:0,30,770	1/1:27,0:5:2.04:6,2,0	0/0:31,0:8:15.01:0,15,179	0/0:32,0:31:78.07:0,78,1781	0/1:16,5:18:17.10:331,0,17	0/1:38,8:38:99:327,0,101	0/1:29,6:30:22.45:313,0,22	0/0:50,0:39:39.58:0,40,392	0/0:51,0:46:99:0,118,2663	0/0:20,0:20:41.80:0,42,818	1/1:32,23:51:15.75:1454,16,0	0/0:54,0:52:99:0,116,2594	0/0:79,0:77:99:0,186,4320	0/1:54,22:73:7.38:1876,0,7	1/1:42,33:69:12.39:1705,12,0	0/0:43,0:42:99:0,105,2536	0/1:21,2:23:87.13:374,0,87	1/1:12,1:13:26.94:326,27,0	1/1:16,5:18:6.10:314,6,0	0/1:47,7:47:94.64:991,0,95	1/1:12,6:17:23.78:289,24,0	0/0:16,0:16:41.72:0,42,822	0/0:90,0:86:99:0,170,4223	1/1:17,8:24:26.98:395,27,0	0/0:36,0:31:75.11:0,75,1506	0/0:34,0:34:84.24:0,84,1971	0/0:23,0:23:48.16:0,48,1398
chr10	18201396	.	A	ACAG	9737.93	PASS	AB=0.880;AC=17;AF=0.304;AN=56;BaseQRankSum=7.299;DP=1089;FS=2.022;HRun=0;HaplotypeScore=207.0405;InbreedingCoeff=0.0438;MQ=44.72;MQ0=39;MQRankSum=-11.978;QD=18.24;ReadPosRankSum=-0.389;VQSLOD=4.7664;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:24:16.79:152,0,17	0/0:13,0:12:33.11:0,33,538	1/1:16,0:2:2.04:6,2,0	0/0:22,0:5:15.01:0,15,185	0/0:31,0:30:80.21:0,80,1235	0/1:19,3:19:27.88:407,0,28	0/1:44,4:34:34.87:406,0,35	0/1:36,0:25:24.06:340,0,24	0/0:52,0:47:65.85:0,66,404	0/0:54,0:48:99:0,126,1938	0/0:20,0:20:44.62:0,45,660	0/1:41,12:51:8.50:1562,0,8	0/0:48,0:47:99:0,135,1979	0/0:77,0:75:99:0,216,3119	0/1:56,19:72:99:1999,0,203	0/1:59,9:62:57.32:1707,0,57	0/0:44,0:42:99:0,112,1748	0/1:17,6:23:67.40:439,0,67	1/1:14,3:14:14.56:447,15,0	0/1:28,1:24:15.18:258,0,15	0/1:54,16:63:60.52:1213,0,61	1/1:22,0:19:24.23:347,24,0	0/0:19,0:17:39.13:0,39,596	0/0:81,0:77:99:0,193,3118	0/1:16,5:21:13.02:454,0,13	0/0:39,0:29:81.62:0,82,1257	0/0:36,0:35:96.20:0,96,1417	0/0:19,0:19:51.17:0,51,842
chr10	18201426	.	ACAACAG	A	1289.22	PASS	AB=0.979;AC=4;AF=0.077;AN=52;BaseQRankSum=1.943;DP=1157;FS=2.736;HRun=0;HaplotypeScore=305.6957;InbreedingCoeff=0.4579;MQ=45.60;MQ0=51;MQRankSum=-6.501;QD=9.34;ReadPosRankSum=0.019;VQSLOD=1.6966;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:44,2:36:99:335,0,329	0/0:16,0:15:45.14:0,45,959	./.	./.	0/0:36,0:35:66.87:0,67,1363	0/0:27,0:24:32.43:0,32,357	0/0:47,0:30:45.51:0,46,346	0/1:44,0:28:99:258,0,201	1/1:18,30:43:53.27:810,53,0	0/0:58,0:50:99:0,132,2717	0/0:17,0:15:30.55:0,31,644	0/0:48,0:45:88.42:0,88,716	0/0:47,0:46:99:0,130,3029	0/0:79,0:77:99:0,210,4765	0/0:75,0:73:99:0,136,1220	0/0:65,0:59:96.29:0,96,843	0/0:46,0:43:99:0,120,2528	0/0:38,0:36:80.29:0,80,619	0/0:28,0:19:33.49:0,33,314	0/0:38,0:30:48.23:0,48,396	0/0:92,0:82:99:0,111,805	0/0:27,0:21:40.71:0,41,265	0/0:17,0:15:38.86:0,39,685	0/0:92,0:88:99:0,217,4936	0/0:27,0:27:33.01:0,33,481	0/0:44,0:32:69.74:0,70,1457	0/0:34,0:33:90.29:0,90,1924	0/0:20,0:20:54.11:0,54,1138
chr10	18201432	.	GCAA	G	8687.81	PASS	AB=0.785;AC=16;AF=0.308;AN=52;BaseQRankSum=13.116;DP=1141;FS=24.568;HRun=0;HaplotypeScore=208.2523;InbreedingCoeff=-0.0835;MQ=45.53;MQ0=48;MQRankSum=-6.018;QD=13.64;ReadPosRankSum=2.646;VQSLOD=3.0420;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:47,1:44:35.16:35,0,361	0/0:16,0:15:42.14:0,42,828	./.	./.	0/0:36,0:35:68.52:0,69,1098	0/1:14,13:24:62.21:515,0,62	0/1:28,15:28:80.76:444,0,81	0/1:39,2:28:99:228,0,173	0/1:44,3:45:61.53:132,0,62	0/0:53,0:48:99:0,129,2382	0/0:17,0:14:30.01:0,30,528	0/1:18,23:37:28.79:874,0,29	0/0:46,0:45:99:0,122,2372	0/0:79,0:77:99:0,202,3778	1/1:32,41:69:30.24:1972,30,0	1/1:24,36:54:29.32:1484,29,0	0/0:46,0:43:99:0,117,2205	0/1:25,15:37:99:856,0,123	0/1:23,5:20:99:229,0,172	0/1:28,10:31:99:299,0,221	0/1:46,43:82:99:869,0,296	0/1:19,10:25:99:351,0,114	0/0:19,0:17:42.11:0,42,773	0/0:87,0:83:99:0,201,4035	0/1:15,11:26:99:400,0,241	0/0:41,0:31:76.70:0,77,1369	0/0:32,0:31:84.24:0,84,1572	0/0:19,0:19:48.06:0,48,792
chr10	18201513	.	ACAACAACAG	A	11359.19	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=7.050;DP=1075;FS=24.131;HRun=0;HaplotypeScore=260.6291;InbreedingCoeff=0.9898;MQ=49.80;MQ0=35;MQRankSum=-9.595;QD=26.36;ReadPosRankSum=-1.466;VQSLOD=2.9597;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:39:97.91:0,98,2638	0/0:16,0:16:45.13:0,45,1382	0/0:34,0:9:20.64:0,21,386	0/0:51,0:20:19.79:0,20,658	0/0:20,0:19:41.93:0,42,1081	1/1:9,27:33:24.08:647,24,0	1/1:32,3:29:48.04:890,48,0	1/1:30,0:22:29.79:501,30,0	0/0:38,0:36:64.46:0,64,1682	0/0:55,0:54:99:0,135,3465	0/0:24,0:24:60.16:0,60,1815	1/1:8,40:43:23.69:652,24,0	0/0:53,0:52:99:0,141,4925	0/0:56,0:56:99:0,132,4350	1/1:30,11:36:78.06:1708,78,0	1/1:9,36:44:38.83:1105,39,0	0/0:61,0:61:99:0,153,5302	1/1:27,3:29:39.32:1108,39,0	1/1:10,15:18:42.07:834,42,0	1/1:10,27:35:50.95:914,51,0	1/1:45,2:47:71.26:1185,71,0	1/1:10,26:34:32.90:640,33,0	0/0:22,0:22:45.13:0,45,1130	0/0:85,0:85:99:0,221,7851	1/1:14,6:19:51.17:1176,51,0	0/0:38,0:35:93.31:0,93,2863	0/0:39,0:39:96.30:0,96,3193	0/0:8,0:7:9.03:0,9,224
chr10	18201519	.	ACAG	A	3099.58	PASS	AB=0.977;AC=16;AF=0.286;AN=56;BaseQRankSum=15.273;DP=1056;FS=16.952;HRun=0;HaplotypeScore=182.6852;InbreedingCoeff=0.1856;MQ=50.44;MQ0=29;MQRankSum=-9.187;QD=7.60;ReadPosRankSum=-0.428;VQSLOD=1.8826;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:43:99:0,117,2056	0/0:18,0:18:54.09:0,54,972	0/0:33,0:9:9.11:0,9,323	0/0:46,0:21:55.20:0,55,698	0/0:26,0:25:62.04:0,62,873	1/1:32,0:29:2.09:151,2,0	0/1:33,2:28:99:194,0,195	0/1:27,3:22:75.57:76,0,213	0/0:38,0:36:3.39:0,3,1166	0/0:59,0:57:99:0,170,2866	0/0:24,0:24:67.27:0,67,1230	1/1:44,0:40:0.80:131,1,0	0/0:54,0:53:99:0,156,3240	0/0:54,0:54:99:0,141,2988	0/1:38,0:34:99:353,0,120	0/1:45,0:44:50.28:198,0,50	0/0:59,0:59:99:0,177,3635	0/1:25,0:25:99:259,0,135	0/1:23,0:18:20.31:319,0,20	0/1:32,0:30:8.30:327,0,8	0/1:48,2:50:85.18:559,0,85	1/1:28,0:27:17.14:168,17,0	0/0:24,0:24:58.96:0,59,981	0/0:82,0:82:99:0,241,4992	1/1:24,2:25:14.37:532,14,0	0/0:41,0:38:99:0,114,2066	0/0:37,0:37:99:0,105,2113	0/0:7,0:7:16.07:0,16,147
chr10	18201524	.	A	AACG	4054.01	PASS	AB=0.959;AC=14;AF=0.250;AN=56;BaseQRankSum=7.509;DP=1059;FS=12.262;HRun=0;HaplotypeScore=189.0367;InbreedingCoeff=0.0110;MQ=50.51;MQ0=27;MQRankSum=-5.524;QD=10.29;ReadPosRankSum=-3.532;VQSLOD=1.9754;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:44:99:0,120,1776	0/0:18,0:18:54.16:0,54,891	0/0:41,0:15:32.78:0,33,444	0/0:44,0:20:54.44:0,54,774	0/0:31,0:30:75.02:0,75,1083	0/1:32,0:30:56.80:84,0,57	0/1:31,3:27:48.40:356,0,48	0/1:27,4:23:15.06:468,0,15	0/0:37,0:35:70.45:0,70,1085	0/0:57,0:55:99:0,156,2429	0/0:25,0:25:66.17:0,66,1069	0/1:43,0:39:31.16:31,0,87	0/0:52,0:51:99:0,151,2519	0/0:52,0:52:99:0,144,2333	0/1:33,3:34:99:285,0,124	0/1:38,0:38:99:130,0,121	0/0:60,0:60:99:0,175,2827	0/1:22,4:26:21.16:569,0,21	0/1:22,0:17:9.15:391,0,9	0/1:31,0:29:69.24:235,0,69	1/1:43,6:48:20.35:807,20,0	0/1:27,0:26:72.50:158,0,73	0/0:29,0:29:69.19:0,69,1012	0/0:84,0:84:99:0,250,4116	1/1:23,2:24:2.10:539,2,0	0/0:47,0:43:99:0,126,1999	0/0:34,0:34:99:0,102,1687	0/0:8,0:8:14.18:0,14,145
chr10	18203131	.	AC	A	10423.63	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=15.192;DP=746;FS=9.969;HRun=2;HaplotypeScore=76.9587;InbreedingCoeff=0.9997;MQ=88.70;MQ0=0;MQRankSum=-1.686;QD=38.04;ReadPosRankSum=1.929;VQSLOD=5.0814;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,154,2415	1/1:0,9:9:27.09:378,27,0	0/0:22,0:22:45.49:0,45,926	0/0:33,0:33:93.14:0,93,1336	1/1:0,19:19:51.13:691,51,0	0/0:20,0:20:60.20:0,60,957	0/0:36,0:36:99:0,108,1696	0/0:37,0:37:99:0,108,1704	0/0:25,0:25:75.24:0,75,1172	1/1:0,25:25:75.18:991,75,0	1/1:0,20:20:51.13:692,51,0	0/0:31,0:31:93.30:0,93,1448	1/1:0,24:24:66.22:923,66,0	1/1:0,27:27:72.24:1006,72,0	0/0:30,0:30:90.28:0,90,1393	0/0:22,0:22:66.23:0,66,1055	1/1:0,38:38:99:1427,102,0	0/0:19,0:19:57.13:0,57,858	0/0:22,0:22:66.22:0,66,1050	0/0:23,0:23:69.21:0,69,1063	0/0:52,0:52:99:0,157,2459	0/0:21,0:21:63.21:0,63,1007	1/1:0,9:9:27.09:378,27,0	1/1:0,25:25:66.22:923,66,0	0/0:28,0:28:84.29:0,84,1343	1/1:0,38:38:99:1589,114,0	1/1:0,26:26:66.22:923,66,0	1/1:0,14:14:36.12:504,36,0
chr10	18206832	.	TACAC	T	15770.67	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=18.952;DP=605;FS=6.148;HRun=0;HaplotypeScore=124.8888;InbreedingCoeff=0.9996;MQ=85.02;MQ0=0;MQRankSum=-8.843;QD=55.73;ReadPosRankSum=2.670;VQSLOD=6.5348;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,13:13:32.87:680,33,0	0/0:8,0:8:24.08:0,24,642	0/0:20,0:20:60.07:0,60,1476	0/0:23,0:23:69.13:0,69,1757	0/0:27,0:27:81.28:0,81,2327	1/1:0,28:28:78.27:1635,78,0	1/1:0,13:13:36.04:707,36,0	1/1:0,28:28:84.23:1675,84,0	1/1:0,19:19:54.19:1132,54,0	0/0:31,0:31:93.32:0,93,2590	0/0:19,0:19:57.18:0,57,1563	1/1:0,20:20:57.20:1187,57,0	0/0:28,0:28:84.25:0,84,2319	0/0:29,0:29:84.01:0,84,2371	1/1:0,25:25:69.24:1446,69,0	1/1:0,29:29:75.26:1564,75,0	0/0:24,0:24:72.25:0,72,2025	1/1:0,19:19:36.12:754,36,0	1/1:0,15:15:45.08:730,45,0	1/1:0,26:26:78.27:1611,78,0	1/1:0,16:16:39.13:817,39,0	1/1:0,13:13:39.09:774,39,0	0/0:20,0:20:60.21:0,60,1664	0/0:21,0:21:63.22:0,63,1806	1/1:0,19:19:51.18:1059,51,0	0/0:24,0:24:72.25:0,72,2049	0/0:27,0:27:81.28:0,81,2284	0/0:21,0:21:63.22:0,63,1766
chr10	18207358	.	G	GT	659.01	PASS	AB=0.737;AC=2;AF=0.036;AN=56;BaseQRankSum=7.569;DP=770;FS=49.622;HRun=0;HaplotypeScore=73.8259;InbreedingCoeff=-0.0376;MQ=77.96;MQ0=0;MQRankSum=-7.492;QD=11.77;ReadPosRankSum=0.385;VQSLOD=1.6033;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:17,9:26:99:297,0,252	0/0:15,0:15:45.12:0,45,609	0/0:14,0:14:39.06:0,39,504	0/0:21,0:21:56.73:0,57,709	0/0:38,0:38:99:0,114,1575	0/0:36,0:36:99:0,105,1468	0/0:26,0:26:78.26:0,78,1090	0/0:41,0:41:99:0,114,1546	0/1:19,11:30:99:451,0,158	0/0:36,0:36:99:0,102,1427	0/0:25,0:25:72.24:0,72,1005	0/0:39,0:39:99:0,117,1609	0/0:38,0:38:99:0,114,1592	0/0:36,0:36:99:0,108,1492	0/0:50,0:50:99:0,151,2095	0/0:30,0:30:90.30:0,90,1257	0/0:23,0:23:66.17:0,66,904	0/0:18,0:18:48.16:0,48,671	0/0:15,0:15:45.15:0,45,629	0/0:31,0:31:93.31:0,93,1300	0/0:17,0:17:51.17:0,51,712	0/0:28,0:28:81.26:0,81,1115	0/0:24,0:24:72.24:0,72,1006	0/0:30,0:29:90.30:0,90,1258	0/0:23,0:23:63.21:0,63,881	0/0:24,0:24:69.23:0,69,965	0/0:31,0:31:93.30:0,93,1280	0/0:5,0:5:15.05:0,15,209
chr10	18207361	.	TAA	T	797.85	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.547;DP=736;FS=44.911;HRun=2;HaplotypeScore=86.1016;InbreedingCoeff=0.9912;MQ=79.97;MQ0=0;MQRankSum=-7.613;QD=36.27;ReadPosRankSum=1.011;VQSLOD=1.0996;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,9:11:26.96:394,27,0	0/0:15,0:15:45.15:0,45,914	0/0:16,0:16:46.71:0,47,886	0/0:20,0:20:57.01:0,57,1003	0/0:37,0:37:99:0,111,2255	0/0:36,0:36:99:0,108,2194	0/0:25,0:25:75.19:0,75,1445	0/0:36,0:36:99:0,105,2081	1/1:0,11:11:33.11:525,33,0	0/0:38,0:38:99:0,111,2234	0/0:24,0:24:72.23:0,72,1424	0/0:38,0:38:99:0,114,2307	0/0:36,0:36:99:0,108,2193	0/0:38,0:38:99:0,114,2281	0/0:49,0:49:99:0,147,2939	0/0:30,0:30:90.29:0,90,1780	0/0:24,0:24:69.17:0,69,1330	0/0:19,0:19:54.10:0,54,1000	0/0:17,0:17:51.18:0,51,1035	0/0:31,0:31:93.31:0,93,1823	0/0:16,0:16:48.16:0,48,975	0/0:28,0:28:84.28:0,84,1657	0/0:26,0:26:78.27:0,78,1582	0/0:30,0:29:90.30:0,90,1779	0/0:25,0:25:72.23:0,72,1417	0/0:25,0:25:75.26:0,75,1513	0/0:30,0:30:90.29:0,90,1778	0/0:5,0:5:15.05:0,15,305
chr10	18207815	.	CA	C	2487.41	PASS	AB=1.000;AC=25;AF=0.446;AN=56;BaseQRankSum=-0.808;DP=504;FS=1.385;HRun=2;HaplotypeScore=58.0234;InbreedingCoeff=0.9032;MQ=59.43;MQ0=9;MQRankSum=0.729;QD=10.07;ReadPosRankSum=-3.034;VQSLOD=0.4529;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:31:72.62:0,73,824	0/0:8,0:8:22.12:0,22,195	0/1:22,0:12:0.22:0,0,248	0/0:9,0:5:4.61:0,5,45	0/0:25,0:25:54.99:0,55,484	1/1:24,2:26:27.07:221,27,0	1/1:14,2:15:25.94:203,26,0	1/1:21,7:27:66.48:612,66,0	0/0:10,0:10:11.94:0,12,100	0/0:15,0:14:39.49:0,39,473	0/0:7,0:7:11.97:0,12,112	1/1:18,0:18:17.20:182,17,0	0/0:15,0:15:40.54:0,41,443	0/0:15,0:14:24.36:0,24,196	1/1:24,1:25:22.17:227,22,0	1/1:20,3:24:17.40:235,17,0	0/0:24,0:23:64.80:0,65,751	1/1:13,2:15:28.50:230,28,0	1/1:3,8:12:27.70:256,28,0	1/1:0,17:17:17.95:165,18,0	1/1:3,11:12:9.02:104,9,0	1/1:12,0:12:20.19:130,20,0	0/0:8,0:8:23.87:0,24,223	0/0:27,0:27:72.77:0,73,834	1/1:18,0:18:17.31:143,17,0	0/0:25,0:23:56.64:0,57,553	0/0:33,0:32:62.86:0,63,617	0/0:3,0:2:5.23:0,5,51
chr10	18207816	.	AAT	A	1344.54	PASS	AB=0.996;AC=14;AF=0.250;AN=56;BaseQRankSum=-1.312;DP=521;FS=2.521;HRun=0;HaplotypeScore=67.2083;InbreedingCoeff=0.0343;MQ=58.63;MQ0=12;MQRankSum=2.160;QD=5.70;ReadPosRankSum=-0.701;VQSLOD=2.1625;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:34:83.79:0,84,1231	0/0:8,0:8:23.88:0,24,271	0/0:22,0:12:8.12:0,8,319	0/0:9,0:5:5.06:0,5,54	0/0:27,0:27:62.96:0,63,768	0/1:26,0:27:99:100,0,146	0/1:16,0:16:48.62:131,0,49	1/1:27,2:27:5.16:401,5,0	0/0:12,0:12:14.90:0,15,132	0/0:15,0:14:39.49:0,39,595	0/0:8,0:7:15.38:0,15,176	0/1:20,0:20:99:114,0,132	0/0:15,0:15:27.54:0,28,586	0/0:14,0:13:29.82:0,30,306	0/1:29,0:29:99:102,0,216	0/1:21,1:22:99:120,0,103	0/0:24,0:23:69.09:0,69,1127	0/1:17,0:16:43.12:115,0,43	0/1:12,0:11:4.39:127,0,4	0/1:18,0:18:5.34:69,0,5	1/1:13,2:13:8.54:72,9,0	0/1:12,0:12:34.54:71,0,35	0/0:8,0:8:24.01:0,24,298	0/0:27,0:27:75.49:0,75,1113	0/1:18,0:18:81.33:81,0,109	0/0:25,0:23:59.08:0,59,726	0/0:32,0:31:74.82:0,75,887	0/0:3,0:2:6.01:0,6,85
chr10	18208152	.	ATGTGTGTG	A	341.08	PASS	AC=8;AF=0.444;AN=18;BaseQRankSum=1.154;DP=387;FS=0.000;HRun=0;HaplotypeScore=71.1047;MQ=16.61;MQ0=279;MQRankSum=-1.936;QD=4.49;ReadPosRankSum=0.910;VQSLOD=1.3781;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	0/0:16,0:11:0:0,0,0	./.	./.	./.	./.	0/0:12,0:5:9.02:0,9,180	0/0:8,0:8:0:0,0,0	./.	./.	./.	./.	./.	./.	1/1:12,0:1:3.01:61,3,0	./.	1/1:12,8:19:6.02:152,6,0	./.	1/1:9,9:15:2.65:76,3,0	./.	./.	1/1:13,9:21:8.35:141,8,0	0/0:12,0:4:6.02:0,6,140	./.	0/0:6,0:2:3.37:0,3,8
chr10	18209282	.	A	ATT	11468.80	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=21.037;DP=698;FS=0.000;HRun=1;HaplotypeScore=185.1349;InbreedingCoeff=0.9923;MQ=56.40;MQ0=1;MQRankSum=-18.167;QD=39.82;ReadPosRankSum=-2.396;VQSLOD=3.9728;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:96.26:0,96,1391	0/0:11,0:11:33.11:0,33,503	0/0:13,0:13:14.62:0,15,452	0/0:14,0:13:39.13:0,39,583	0/0:40,0:40:99:0,117,1789	1/1:9,15:24:69.20:1068,69,0	1/1:2,6:8:21.06:312,21,0	1/1:16,19:35:70.75:1338,71,0	0/0:33,0:33:93.32:0,93,1422	0/0:29,0:29:81.27:0,81,1222	0/0:28,0:28:84.26:0,84,1244	1/1:11,20:31:90.22:1271,90,0	0/0:33,0:33:96.31:0,96,1445	0/0:20,0:20:57.19:0,57,871	1/1:10,19:29:84.23:1240,84,0	1/1:3,30:33:90.31:1400,90,0	0/0:29,0:29:87.27:0,87,1308	1/1:6,5:11:30.10:485,30,0	1/1:9,6:17:45.15:743,45,0	1/1:7,23:31:87.18:1236,87,0	1/1:6,7:12:23.60:231,24,0	1/1:9,14:23:63.18:911,63,0	0/0:27,0:27:81.24:0,81,1190	0/0:16,0:16:48.16:0,48,734	1/1:6,26:32:93.12:1234,93,0	0/0:33,0:33:93.31:0,93,1402	0/0:41,0:40:99:0,120,1831	0/0:9,0:9:12.04:0,12,182
chr10	18209285	.	A	ACTT	7635.95	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=19.184;DP=628;FS=5.421;HRun=0;HaplotypeScore=172.6382;InbreedingCoeff=0.9888;MQ=59.40;MQ0=1;MQRankSum=-18.201;QD=34.09;ReadPosRankSum=2.119;VQSLOD=5.4446;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:96.25:0,96,1640	0/0:11,0:11:33.08:0,33,552	0/0:12,0:12:36.12:0,36,581	0/0:15,0:15:39.13:0,39,659	0/0:40,0:40:99:0,120,2190	1/1:1,15:16:48.11:656,48,0	1/1:1,6:7:18.03:237,18,0	1/1:8,19:27:49.46:822,49,0	0/0:35,0:35:99:0,99,1750	0/0:29,0:29:87.30:0,87,1613	0/0:26,0:26:78.25:0,78,1401	1/1:3,20:23:60.27:845,60,0	0/0:34,0:34:99:0,99,1797	0/0:19,0:19:57.18:0,57,1029	1/1:2,19:21:57.14:756,57,0	1/1:1,27:28:84.27:1207,84,0	0/0:28,0:28:84.28:0,84,1536	1/1:2,5:7:14.83:216,15,0	1/1:4,6:10:11.37:271,11,0	1/1:7,19:25:59.53:839,60,0	1/1:3,6:8:14.63:170,15,0	1/1:0,14:14:42.09:566,42,0	0/0:21,0:21:63.18:0,63,1103	0/0:18,0:18:54.19:0,54,990	1/1:10,25:36:75.63:1051,76,0	0/0:31,0:31:84.29:0,84,1562	0/0:44,0:43:99:0,126,2271	0/0:9,0:9:24.08:0,24,432
chr10	18209286	.	A	ATT	7388.35	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=19.647;DP=678;FS=2.843;HRun=1;HaplotypeScore=190.7307;InbreedingCoeff=0.9984;MQ=58.07;MQ0=1;MQRankSum=-17.777;QD=26.77;ReadPosRankSum=-2.536;VQSLOD=3.3073;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:93.31:0,93,1407	0/0:9,0:9:27.09:0,27,414	0/0:14,0:14:29.24:0,29,435	0/0:16,0:16:42.10:0,42,567	0/0:39,0:39:99:0,117,1782	1/1:9,15:24:68.93:646,69,0	1/1:4,6:10:26.82:231,27,0	1/1:18,19:37:90.92:934,91,0	0/0:35,0:35:96.31:0,96,1446	0/0:29,0:29:87.30:0,87,1332	0/0:26,0:26:78.25:0,78,1169	1/1:6,20:26:77.99:746,78,0	0/0:34,0:34:99:0,102,1535	0/0:19,0:19:54.18:0,54,827	1/1:8,19:27:80.85:778,81,0	1/1:5,27:32:95.94:946,96,0	0/0:27,0:27:81.28:0,81,1241	1/1:2,5:9:19.43:165,19,0	1/1:7,6:13:32.05:335,32,0	1/1:10,19:28:83.76:783,84,0	1/1:5,6:10:28.63:206,29,0	1/1:0,14:14:41.89:381,42,0	0/0:20,0:20:57.18:0,57,852	0/0:18,0:18:54.18:0,54,824	1/1:17,26:44:99:1236,129,0	0/0:33,0:33:93.29:0,93,1363	0/0:43,0:42:99:0,129,1909	0/0:9,0:9:24.08:0,24,365
chr10	18209875	.	C	CA	13540.21	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-19.562;DP=776;FS=0.557;HRun=2;HaplotypeScore=68.3036;InbreedingCoeff=0.9978;MQ=81.38;MQ0=0;MQRankSum=-2.647;QD=39.59;ReadPosRankSum=1.039;VQSLOD=5.2225;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,150,1827	0/0:13,0:13:39.12:0,39,483	0/0:20,0:20:54.14:0,54,642	0/0:21,0:21:48.05:0,48,553	0/0:29,0:29:84.21:0,84,1000	1/1:0,26:26:78.26:1123,78,0	1/1:0,25:25:75.25:1080,75,0	1/1:4,32:36:93.27:1283,93,0	0/0:41,0:41:99:0,114,1373	0/0:27,0:27:78.23:0,78,948	0/0:23,0:23:69.22:0,69,855	1/1:1,23:24:60.20:864,60,0	0/0:34,0:34:96.26:0,96,1152	0/0:31,0:31:90.27:0,90,1103	1/1:0,27:27:75.25:1080,75,0	1/1:0,34:34:99:1469,102,0	0/0:27,0:27:81.25:0,81,1001	1/1:2,20:22:57.19:821,57,0	1/1:2,17:19:51.17:733,51,0	1/1:1,27:28:78.26:1123,78,0	1/1:4,36:40:99:1437,102,0	1/1:1,30:31:90.26:1273,90,0	0/0:14,0:14:36.11:0,36,446	0/0:31,0:31:87.19:0,87,1032	1/1:0,30:30:87.29:1253,87,0	0/0:34,0:34:93.29:0,93,1152	0/0:32,0:31:93.29:0,93,1153	0/0:5,0:5:15.05:0,15,186
chr10	18212154	.	TTA	T	11945.78	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=11.998;DP=573;FS=0.317;HRun=0;HaplotypeScore=72.2772;InbreedingCoeff=0.9977;MQ=75.05;MQ0=1;MQRankSum=-3.255;QD=36.98;ReadPosRankSum=1.271;VQSLOD=6.7795;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,26:28:72.24:1008,72,0	0/0:6,0:6:18.06:0,18,314	0/0:11,0:11:27.09:0,27,481	0/0:14,0:14:39.13:0,39,670	0/0:20,0:20:54.19:0,54,972	1/1:1,18:19:45.15:630,45,0	1/1:2,23:25:60.12:840,60,0	1/1:4,31:35:93.31:1302,93,0	1/1:1,17:18:48.16:672,48,0	0/0:17,0:17:48.16:0,48,861	0/0:17,0:17:48.16:0,48,863	1/1:1,32:33:90.30:1260,90,0	0/0:21,0:21:60.21:0,60,1078	0/0:26,0:26:72.25:0,72,1296	1/1:0,22:22:63.21:876,63,0	1/1:0,12:11:33.11:462,33,0	0/0:32,0:32:96.33:0,96,1724	1/1:1,22:23:57.19:798,57,0	1/1:2,23:25:69.22:950,69,0	1/1:2,11:13:33.11:462,33,0	1/1:1,42:43:99:1638,117,0	1/1:0,8:8:21.07:291,21,0	0/0:10,0:10:27.09:0,27,475	0/0:23,0:23:66.23:0,66,1173	1/1:0,19:19:54.18:756,54,0	0/0:25,0:25:69.24:0,69,1233	0/0:20,0:19:54.19:0,54,970	0/0:8,0:8:24.08:0,24,432
chr10	18212259	.	GTTC	G	11809.29	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=16.316;DP=639;FS=0.000;HRun=0;HaplotypeScore=94.8626;InbreedingCoeff=0.9992;MQ=73.65;MQ0=0;MQRankSum=-3.846;QD=39.90;ReadPosRankSum=1.085;VQSLOD=5.9082;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:87.30:0,87,1911	0/0:10,0:10:30.10:0,30,670	0/0:12,0:12:30.10:0,30,647	0/0:14,0:14:21.75:0,22,701	0/0:38,0:38:99:0,111,2390	1/1:0,17:17:48.16:783,48,0	1/1:3,21:24:57.19:918,57,0	1/1:4,30:34:90.27:1415,90,0	0/0:12,0:12:33.11:0,33,719	0/0:20,0:20:60.21:0,60,1340	0/0:27,0:27:81.26:0,81,1747	1/1:2,22:24:60.20:977,60,0	0/0:25,0:25:72.24:0,72,1551	0/0:35,0:35:99:0,105,2277	1/1:1,21:22:60.07:916,60,0	1/1:0,19:19:54.18:881,54,0	0/0:18,0:18:54.19:0,54,1206	1/1:3,29:32:78.27:1273,78,0	1/1:2,20:22:54.13:828,54,0	1/1:3,26:29:75.17:1189,75,0	1/1:4,33:37:75.12:1162,75,0	1/1:1,13:14:27.09:440,27,0	0/0:19,0:19:54.19:0,54,1203	0/0:19,0:19:57.20:0,57,1269	1/1:0,22:22:63.22:1027,63,0	0/0:26,0:26:69.23:0,69,1502	0/0:24,0:24:66.23:0,66,1474	0/0:14,0:14:42.14:0,42,920
chr10	18217707	.	ACCAT	A	1425.68	PASS	AC=44;AF=0.917;AN=48;BaseQRankSum=-3.461;DP=106;FS=3.207;HRun=0;HaplotypeScore=20.5189;InbreedingCoeff=0.2801;MQ=104.57;MQ0=0;MQRankSum=-3.339;QD=16.20;ReadPosRankSum=-0.152;VQSLOD=2.8063;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,3:5:6.02:108,6,0	1/1:0,2:2:3.01:54,3,0	0/0:7,0:7:2.43:0,2,38	0/0:7,0:7:11.91:0,12,92	1/1:6,0:6:17.97:172,18,0	./.	1/1:5,0:4:6:53,6,0	1/1:10,0:10:17.42:154,17,0	1/1:5,0:5:8.93:70,9,0	1/1:3,0:3:3:28,3,0	1/1:4,0:4:5.99:50,6,0	1/1:3,0:3:9:80,9,0	1/1:3,5:8:2.73:54,3,0	1/1:2,0:2:6:52,6,0	1/1:2,0:2:6:54,6,0	./.	1/1:3,0:3:2.06:25,2,0	./.	./.	1/1:3,0:3:5.22:34,5,0	1/1:4,0:4:6.47:54,6,0	1/1:4,0:4:6:54,6,0	1/1:5,0:5:12:104,12,0	1/1:2,0:2:3:26,3,0	1/1:6,0:6:15.01:135,15,0	1/1:1,2:3:9:99,9,0	1/1:1,0:1:2.99:24,3,0	1/1:2,0:2:6:52,6,0
chr10	18220371	.	AGT	A	709.13	PASS	AB=0.885;AC=8;AF=0.148;AN=54;BaseQRankSum=2.778;DP=663;FS=2.251;HRun=0;HaplotypeScore=113.2693;InbreedingCoeff=0.1588;MQ=62.07;MQ0=14;MQRankSum=2.383;QD=5.03;ReadPosRankSum=1.657;VQSLOD=3.1596;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:18,16:33:3:242,3,0	0/1:8,2:10:18.25:18,0,135	0/0:31,0:22:2.94:0,3,18	./.	0/0:23,0:23:24.74:0,25,428	0/0:17,0:20:3:0,3,26	0/0:12,0:13:15:0,15,143	0/0:39,0:37:41.56:0,42,296	1/1:10,14:24:38.78:410,39,0	0/0:23,0:23:21.21:0,21,267	0/0:24,0:24:35.70:0,36,400	0/0:18,0:29:32.96:0,33,283	0/0:31,0:31:53.99:0,54,661	0/0:27,1:28:5.59:0,6,417	0/0:16,0:26:5.83:0,6,52	0/0:16,0:24:12.47:0,12,105	0/0:25,0:24:0.77:0,1,427	0/0:12,1:12:12.79:0,13,88	0/0:11,0:17:23.91:0,24,229	0/0:21,0:32:3.47:0,3,27	0/0:10,0:18:2.97:0,3,20	0/0:13,0:22:3.62:0,4,43	0/1:21,1:23:73.88:74,0,322	0/1:18,5:22:88:88,0,430	0/0:11,0:14:2.94:0,3,18	0/0:25,0:25:21.94:0,22,444	0/1:26,1:27:6.20:6,0,335	0/0:9,0:9:17.89:0,18,206
chr10	18221522	.	G	GA	8618.27	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-14.448;DP=756;FS=3.401;HRun=10;HaplotypeScore=78.5626;InbreedingCoeff=0.9454;MQ=72.03;MQ0=1;MQRankSum=-2.063;QD=22.56;ReadPosRankSum=0.752;VQSLOD=5.6753;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,18:27:34.45:388,34,0	0/0:12,1:14:3:0,3,220	0/0:28,0:21:7.26:0,7,188	0/0:16,0:12:8.70:0,9,72	0/0:35,0:35:92.84:0,93,759	1/1:4,25:30:72.01:750,72,0	1/1:4,10:14:27.07:288,27,0	1/1:5,32:37:91.02:929,91,0	1/1:5,22:27:11.22:527,11,0	0/0:37,0:38:62.91:0,63,709	0/0:26,0:27:55.45:0,55,530	1/1:4,25:29:31.77:681,32,0	0/0:30,0:30:80.88:0,81,661	0/0:29,0:29:83.89:0,84,689	1/1:2,26:28:54.14:576,54,0	1/1:8,27:35:78.16:819,78,0	0/0:36,0:36:86.81:0,87,705	1/1:6,19:25:50.70:543,51,0	1/1:3,20:24:45.23:615,45,0	1/1:3,25:29:28.88:706,29,0	1/1:1,20:21:50.92:523,51,0	1/1:5,20:25:10.86:524,11,0	0/0:26,0:26:62.87:0,63,515	0/0:10,0:10:26.97:0,27,222	1/1:2,26:31:74.75:748,75,0	0/0:40,0:41:99:0,110,889	0/0:30,2:32:42.85:0,43,550	0/0:10,0:10:29.97:0,30,246
chr10	18222707	.	AG	A	6341.76	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=9.067;DP=584;FS=5.024;HRun=8;HaplotypeScore=68.2470;InbreedingCoeff=0.9882;MQ=77.34;MQ0=3;MQRankSum=-0.364;QD=24.68;ReadPosRankSum=3.307;VQSLOD=5.7891;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:27:51.72:0,52,263	1/1:0,10:10:27.04:261,27,0	0/0:27,0:24:48.11:0,48,479	0/0:22,0:19:28.83:0,29,350	1/1:5,19:24:60.10:579,60,0	0/0:14,0:14:42.09:0,42,491	0/0:19,0:19:42.11:0,42,495	0/0:22,0:22:51.07:0,51,585	0/0:5,0:19:40.49:0,40,225	1/1:5,20:25:60.09:579,60,0	1/1:0,14:14:30.05:290,30,0	0/0:18,0:18:45.12:0,45,522	1/1:3,19:22:57.09:550,57,0	1/1:5,22:27:72.11:694,72,0	0/0:25,0:25:69.20:0,69,822	0/0:21,0:22:66.06:0,66,765	1/1:2,34:36:96.15:927,96,0	0/0:25,0:25:66.20:0,66,797	0/0:16,0:16:42.09:0,42,491	0/0:17,0:17:39.11:0,39,459	0/0:21,0:21:51.14:0,51,603	0/0:14,1:15:13.16:0,13,442	1/1:0,19:19:45.07:435,45,0	1/1:2,24:26:69.11:666,69,0	0/0:17,0:17:51.15:0,51,606	1/1:1,19:20:57.09:550,57,0	1/1:1,28:29:75.12:724,75,0	1/1:0,5:5:9.01:87,9,0
chr10	18224830	.	CA	C	2497.29	PASS	AB=0.872;AC=29;AF=0.518;AN=56;BaseQRankSum=6.676;DP=499;FS=0.817;HRun=13;HaplotypeScore=58.4105;InbreedingCoeff=0.7726;MQ=72.25;MQ0=0;MQRankSum=1.273;QD=10.41;ReadPosRankSum=1.282;VQSLOD=3.0775;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:17:20.02:0,20,208	0/0:9,1:10:2.13:0,2,182	0/1:18,0:16:10.28:10,0,65	0/0:14,0:11:14.82:0,15,115	0/0:33,4:38:14.23:0,14,599	1/1:2,7:10:19.93:137,20,0	1/1:1,9:10:23.85:175,24,0	1/1:4,21:26:34.46:372,34,0	1/1:4,10:14:23.82:175,24,0	0/0:16,1:17:17.14:0,17,319	0/0:20,0:22:41.05:0,41,413	1/1:2,11:13:23.85:175,24,0	0/1:10,1:12:1.75:2,0,161	0/0:20,0:20:51:0,51,459	1/1:4,16:22:39.86:274,40,0	1/1:2,12:14:7.94:194,8,0	0/0:17,0:17:36.05:0,36,345	1/1:4,11:16:28.83:203,29,0	1/1:3,7:10:17.87:131,18,0	1/1:5,20:25:56.64:416,57,0	1/1:1,6:7:14.88:109,15,0	1/1:6,7:13:20.84:153,21,0	0/0:17,1:19:20.03:0,20,331	0/1:13,4:17:2.56:3,0,274	1/1:1,10:12:25.89:181,26,0	0/0:22,1:25:24.36:0,24,395	0/0:35,1:38:39.20:0,39,555	0/0:18,2:21:3.43:0,3,388
chr10	18225291	.	TAC	T	1930.34	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=11.092;DP=743;FS=2.709;HRun=0;HaplotypeScore=100.0436;InbreedingCoeff=0.9917;MQ=84.03;MQ0=0;MQRankSum=-10.757;QD=41.96;ReadPosRankSum=0.686;VQSLOD=5.3830;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,23:25:69.11:1028,69,0	0/0:5,0:5:15.05:0,15,305	0/0:19,0:19:57.20:0,57,1127	0/0:28,0:28:78.26:0,78,1547	0/0:46,0:46:99:0,138,2723	0/0:28,0:28:84.29:0,84,1675	0/0:33,0:33:99:0,99,1955	0/0:40,0:40:99:0,117,2304	1/1:0,21:21:63.22:1024,63,0	0/0:30,0:30:90.30:0,90,1788	0/0:29,0:29:87.28:0,87,1697	0/0:15,0:15:45.15:0,45,913	0/0:31,0:31:93.32:0,93,1853	0/0:31,0:31:93.32:0,93,1884	0/0:41,0:41:99:0,123,2475	0/0:36,0:36:99:0,108,2110	0/0:22,0:21:66.21:0,66,1303	0/0:19,0:19:57.20:0,57,1135	0/0:30,0:30:90.30:0,90,1777	0/0:26,0:26:78.27:0,78,1563	0/0:40,0:40:99:0,117,2363	0/0:22,0:22:66.23:0,66,1329	0/0:25,0:25:75.23:0,75,1445	0/0:26,0:26:78.21:0,78,1487	0/0:14,0:14:42.14:0,42,853	0/0:28,0:28:84.29:0,84,1684	0/0:21,0:20:63.22:0,63,1266	0/0:12,0:12:33.11:0,33,670
chr10	18225297	.	TG	T	1290.68	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=10.637;DP=733;FS=2.860;HRun=1;HaplotypeScore=85.8432;InbreedingCoeff=0.9957;MQ=81.28;MQ0=0;MQRankSum=-10.419;QD=28.68;ReadPosRankSum=1.050;VQSLOD=3.5345;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,24:23:60.18:709,60,0	0/0:6,0:6:18.05:0,18,265	0/0:15,0:15:45.14:0,45,692	0/0:26,0:26:72.24:0,72,1139	0/0:45,0:45:99:0,132,2080	0/0:27,0:27:81.26:0,81,1267	0/0:32,0:32:93.30:0,93,1459	0/0:39,0:39:99:0,114,1733	1/1:1,19:20:60.15:703,60,0	0/0:27,0:27:81.27:0,81,1264	0/0:30,0:30:90.29:0,90,1393	0/0:15,0:15:45.12:0,45,672	0/0:31,0:31:93.32:0,93,1470	0/0:30,0:30:90.31:0,90,1432	0/0:42,0:42:99:0,126,1988	0/0:37,0:37:99:0,111,1774	0/0:23,0:22:69.19:0,69,1049	0/0:20,0:20:60.20:0,60,954	0/0:28,0:28:83.93:0,84,1237	0/0:26,0:26:78.22:0,78,1214	0/0:40,0:40:99:0,120,1863	0/0:21,0:21:63.21:0,63,1005	0/0:27,0:27:81.25:0,81,1247	0/0:25,0:25:75.26:0,75,1189	0/0:13,0:13:39.13:0,39,611	0/0:29,0:29:87.30:0,87,1387	0/0:23,0:22:69.19:0,69,1069	0/0:11,0:11:33.10:0,33,504
chr10	18225466	.	AT	A	1462.41	PASS	AB=0.896;AC=11;AF=0.196;AN=56;BaseQRankSum=8.120;DP=601;FS=6.357;HRun=12;HaplotypeScore=82.0057;InbreedingCoeff=0.6881;MQ=69.25;MQ0=0;MQRankSum=0.619;QD=11.89;ReadPosRankSum=-1.441;VQSLOD=3.0395;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:19:31.50:0,32,168	0/0:9,1:11:6.66:0,7,235	0/0:11,0:10:15:0,15,134	0/1:9,1:10:32.66:33,0,46	0/0:21,0:20:51.04:0,51,502	0/0:21,1:22:30.86:0,31,489	0/0:21,0:22:25.94:0,26,391	1/1:2,28:30:53.18:585,53,0	0/0:2,0:20:40.06:0,40,221	0/0:31,0:31:69:0,69,682	0/0:15,0:15:39.06:0,39,386	0/1:14,2:16:7.42:7,0,285	0/0:33,0:33:90.13:0,90,884	0/0:20,0:22:59.88:0,60,576	0/0:29,0:29:76.01:0,76,747	0/0:27,1:32:60.41:0,60,739	0/0:32,0:32:81.15:0,81,817	0/0:13,0:13:30.05:0,30,300	1/1:4,16:21:47.68:363,48,0	1/1:3,19:22:47.80:372,48,0	1/1:0,14:16:36.95:267,37,0	0/0:14,1:15:18.83:0,19,358	0/0:28,0:29:71.97:0,72,708	0/0:16,0:16:48.06:0,48,468	0/0:23,0:23:30.87:0,31,490	0/0:36,0:36:78.15:0,78,787	0/0:24,0:26:62.95:0,63,615	0/1:6,1:8:2.23:2,0,145
chr10	18230144	.	G	GA	1450.40	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=0.380;DP=719;FS=7.167;HRun=9;HaplotypeScore=69.6304;InbreedingCoeff=0.9894;MQ=69.62;MQ0=0;MQRankSum=0.571;QD=21.65;ReadPosRankSum=2.265;VQSLOD=4.5659;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,34:42:87.05:934,87,0	0/0:15,0:15:41.99:0,42,365	0/0:15,0:11:31.85:0,32,248	0/0:14,0:14:14.80:0,15,129	0/0:28,0:28:71.94:0,72,620	0/0:31,0:31:86.95:0,87,751	0/0:20,0:21:49.98:0,50,412	0/0:23,0:23:46.53:0,47,394	1/1:2,23:25:37.79:638,38,0	0/0:33,0:33:86.97:0,87,755	0/0:19,0:19:47.98:0,48,416	0/0:36,0:36:86.94:0,87,749	0/0:26,0:26:71.95:0,72,617	0/0:28,0:28:62.94:0,63,540	0/0:35,0:35:89.89:0,90,769	0/0:24,0:24:71.99:0,72,625	0/0:31,0:31:77.97:0,78,677	0/0:21,0:21:59.97:0,60,517	0/0:23,0:23:41.96:0,42,363	0/0:37,0:37:89.34:0,89,744	0/0:23,0:23:59.98:0,60,521	0/0:21,1:22:29.81:0,30,487	0/0:29,2:31:28.14:0,28,588	0/0:24,0:24:62.96:0,63,540	0/0:29,0:29:80.94:0,81,691	0/0:34,0:35:89:0,89,758	0/0:18,0:19:47.02:0,47,397	0/0:8,0:8:23.98:0,24,204
chr10	18231329	.	AT	A	926.12	PASS	AB=0.880;AC=11;AF=0.196;AN=56;BaseQRankSum=8.538;DP=586;FS=5.835;HRun=12;HaplotypeScore=62.9512;InbreedingCoeff=0.1982;MQ=63.64;MQ0=0;MQRankSum=0.108;QD=4.95;ReadPosRankSum=0.719;VQSLOD=1.5941;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,39:45:99:842,110,0	0/1:5,1:6:5.20:5,0,134	0/0:7,0:6:11.76:0,12,110	0/0:9,0:10:13.26:0,13,114	0/0:39,2:42:55.43:0,55,866	0/0:23,2:25:42.89:0,43,616	0/1:13,2:16:7.58:8,0,267	0/1:19,3:22:24.62:25,0,320	1/1:0,6:6:17.94:142,18,0	0/1:24,3:28:19.48:19,0,390	0/0:18,0:20:47.76:0,48,455	0/0:18,2:22:1.07:0,1,314	0/1:24,2:26:8.13:8,0,454	0/0:22,0:23:56.71:0,57,513	0/1:19,4:24:23.10:23,0,493	0/0:21,2:23:7.61:0,8,425	0/0:29,0:30:56.95:0,57,562	0/0:16,1:18:15.60:0,16,301	0/0:16,0:17:23.88:0,24,223	0/0:20,2:22:25.68:0,26,414	0/0:22,1:23:37.35:0,37,551	0/0:11,1:12:6.82:0,7,251	0/0:19,1:21:15.66:0,16,320	0/1:12,1:14:3.03:3,0,187	0/0:19,1:20:24.85:0,25,429	0/0:31,1:32:42.90:0,43,616	0/0:26,0:27:56.06:0,56,564	0/0:5,0:5:12:0,12,110
chr10	18231378	.	A	AACAT	10682.92	PASS	AB=1.000;AC=27;AF=0.519;AN=52;BaseQRankSum=-12.872;DP=679;FS=2.525;HRun=0;HaplotypeScore=119.2182;InbreedingCoeff=0.8839;MQ=61.57;MQ0=5;MQRankSum=0.682;QD=30.18;ReadPosRankSum=1.153;VQSLOD=5.0533;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:32:3:0,3,28	1/1:3,7:10:18.06:384,18,0	./.	./.	1/1:14,14:32:27.08:596,27,0	0/0:23,0:23:27.08:0,27,394	0/0:13,0:14:14.99:0,15,165	0/0:37,0:36:5.74:0,6,35	0/0:4,0:23:49.87:0,50,451	1/1:11,15:27:48.15:1047,48,0	1/1:12,12:27:27.09:559,27,0	0/0:31,0:32:63.20:0,63,925	1/1:13,24:40:57.20:1331,57,0	1/1:9,22:31:57.20:1331,57,0	0/0:36,0:35:57.03:0,57,832	0/0:23,0:23:36.12:0,36,550	1/1:11,8:21:18.06:384,18,0	0/1:16,0:16:6.52:7,0,104	0/0:22,0:23:24.07:0,24,349	0/0:19,0:19:33.10:0,33,484	0/0:24,0:26:48.10:0,48,632	0/0:17,0:17:27.08:0,27,395	1/1:6,14:22:35.98:841,36,0	1/1:7,6:13:12.04:280,12,0	1/1:12,18:31:42.14:981,42,0	1/1:15,22:37:26.21:1493,26,0	1/1:17,22:39:42.14:979,42,0	1/1:3,4:7:21.07:470,21,0
chr10	18231890	.	T	TA	924.08	PASS	AB=0.943;AC=7;AF=0.125;AN=56;BaseQRankSum=1.830;DP=570;FS=5.073;HRun=12;HaplotypeScore=104.8363;InbreedingCoeff=0.5468;MQ=67.24;MQ0=0;MQRankSum=-2.041;QD=11.27;ReadPosRankSum=-3.682;VQSLOD=2.3333;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:12,15:28:67:572,67,0	0/0:6,0:6:8.92:0,9,66	0/0:10,0:10:17.87:0,18,131	0/1:3,0:4:1.68:2,0,32	0/0:28,1:31:23.37:0,23,385	0/0:17,0:18:37.62:0,38,260	0/0:10,0:10:17.88:0,18,131	0/0:25,0:27:49.65:0,50,355	1/1:8,11:19:48.06:458,48,0	0/0:17,0:17:37.13:0,37,257	0/0:22,0:24:49.63:0,50,355	0/0:16,0:18:39.83:0,40,272	0/0:17,0:18:37.76:0,38,268	0/0:32,0:32:58.57:0,59,557	0/0:25,0:27:35.83:0,36,378	0/1:16,2:19:5.53:6,0,280	0/0:22,1:23:21.30:0,21,320	0/0:20,0:20:50.70:0,51,371	0/0:22,1:27:18.83:0,19,307	0/0:27,0:29:49.93:0,50,353	0/0:11,0:11:14.88:0,15,109	0/0:11,0:12:22.50:0,23,153	0/0:27,0:28:58.60:0,59,420	0/1:9,1:12:19.35:19,0,152	0/0:26,1:28:32.44:0,32,391	0/0:23,2:25:10.35:0,10,400	0/0:29,0:30:73.56:0,74,529	0/0:15,0:17:31.70:0,32,219
chr10	18231922	.	CA	C	1098.46	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.107;DP=568;FS=1.404;HRun=3;HaplotypeScore=93.1246;InbreedingCoeff=0.9965;MQ=79.43;MQ0=0;MQRankSum=-4.969;QD=28.91;ReadPosRankSum=0.408;VQSLOD=2.9142;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,23:26:69.22:849,69,0	0/0:8,0:8:24.08:0,24,346	0/0:15,0:15:42.03:0,42,567	0/0:14,0:14:36.10:0,36,474	0/0:33,0:33:93.29:0,93,1295	0/0:20,0:20:60.18:0,60,844	0/0:18,0:18:54.18:0,54,778	0/0:35,0:35:99:0,102,1422	1/1:1,11:12:30.09:370,30,0	0/0:20,0:20:60.20:0,60,864	0/0:26,0:26:78.26:0,78,1123	0/0:21,0:21:60.19:0,60,844	0/0:17,0:17:48.13:0,48,647	0/0:30,0:30:90.28:0,90,1256	0/0:25,0:24:75.25:0,75,1080	0/0:24,0:24:72.23:0,72,1018	0/0:26,0:26:75.25:0,75,1079	0/0:16,0:16:48.12:0,48,667	0/0:21,0:21:63.21:0,63,904	0/0:23,0:23:66.19:0,66,914	0/0:8,0:8:24.08:0,24,346	0/0:11,0:11:27.09:0,27,389	0/0:22,0:22:66.22:0,66,950	0/0:14,0:14:42.13:0,42,587	0/0:21,0:21:63.21:0,63,907	0/0:28,0:28:81.24:0,81,1115	0/0:24,0:24:72.18:0,72,961	0/0:10,0:10:27.09:0,27,389
chr10	18232031	.	G	GA	1150.16	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-6.592;DP=576;FS=6.821;HRun=6;HaplotypeScore=53.3007;InbreedingCoeff=0.9893;MQ=86.63;MQ0=0;MQRankSum=-2.065;QD=31.95;ReadPosRankSum=2.326;VQSLOD=4.1644;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,36:36:99:1245,99,0	0/0:9,0:9:27.05:0,27,270	0/0:30,0:30:77.82:0,78,763	0/0:14,0:14:30.06:0,30,302	0/0:36,0:36:96.21:0,96,979	0/0:23,0:23:69.12:0,69,689	0/0:13,0:13:39.08:0,39,393	0/0:30,0:30:87.16:0,87,868	0/0:16,0:16:48.11:0,48,490	0/0:22,0:22:54.12:0,54,551	0/0:21,0:21:63.14:0,63,643	0/0:20,0:20:51.11:0,51,520	0/0:7,0:7:21.05:0,21,214	0/0:24,0:24:66.14:0,66,667	0/0:17,0:17:45.10:0,45,459	0/0:24,0:24:66.14:0,66,668	0/0:21,0:21:57.11:0,57,575	0/0:21,0:21:57.09:0,57,570	0/0:22,0:22:63.14:0,63,643	0/0:18,0:18:45.10:0,45,459	0/0:17,0:17:45.10:0,45,459	0/0:25,0:25:63.10:0,63,628	0/0:22,0:22:66.15:0,66,673	0/0:7,0:7:21.05:0,21,214	0/0:22,0:22:60.13:0,60,612	0/0:17,0:17:48.10:0,48,485	0/0:33,0:33:93.21:0,93,948	0/0:9,0:9:27.06:0,27,275
chr10	18233652	.	A	AAT	8709.57	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-8.580;DP=515;FS=2.547;HRun=0;HaplotypeScore=54.2854;InbreedingCoeff=0.9127;MQ=70.15;MQ0=2;MQRankSum=-1.825;QD=37.22;ReadPosRankSum=-0.508;VQSLOD=6.5873;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,9:9:15.05:251,15,0	0/0:17,0:17:45.13:0,45,565	0/0:5,0:5:2.19:0,2,71	0/0:7,0:7:9.02:0,9,109	0/0:40,0:40:99:0,108,1334	1/1:3,17:20:45.15:752,45,0	1/1:1,7:8:9.03:150,9,0	1/1:6,42:49:99:1870,129,0	1/1:2,4:6:9.03:150,9,0	0/0:25,0:25:66.18:0,66,798	0/0:29,0:29:81.24:0,81,1014	1/1:4,8:12:27.98:453,28,0	0/0:21,0:21:54.14:0,54,664	0/0:17,0:17:24.06:0,24,284	1/1:1,20:21:48.16:802,48,0	1/1:2,13:15:30.10:501,30,0	0/0:21,0:21:60.12:0,60,721	1/1:2,12:13:36.12:592,36,0	1/1:1,12:14:39.10:580,39,0	1/1:3,24:25:66.16:1058,66,0	1/1:1,6:7:15.05:251,15,0	1/1:0,1:1:3.01:50,3,0	0/0:17,0:17:40.36:0,40,492	0/0:3,0:3:9.01:0,9,100	1/1:0,31:31:75.26:1250,75,0	0/0:35,0:35:99:0,99,1202	0/0:29,0:29:87.26:0,87,1094	0/0:15,0:15:45.15:0,45,577
chr10	18234829	.	GCC	G	1645.56	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.537;DP=621;FS=3.837;HRun=4;HaplotypeScore=70.2036;InbreedingCoeff=0.9958;MQ=80.79;MQ0=0;MQRankSum=-4.833;QD=37.40;ReadPosRankSum=2.055;VQSLOD=3.1854;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,29:29:78.26:1149,78,0	0/0:14,0:14:42.14:0,42,785	0/0:14,0:14:42.14:0,42,787	0/0:17,0:17:48.11:0,48,820	0/0:30,0:30:84.29:0,84,1571	0/0:29,0:28:87.29:0,87,1600	0/0:17,0:17:51.17:0,51,955	0/0:32,0:32:96.31:0,96,1733	1/1:0,15:15:42.14:619,42,0	0/0:23,0:23:66.23:0,66,1234	0/0:28,0:28:81.28:0,81,1514	0/0:15,0:15:45.15:0,45,837	0/0:26,0:26:75.26:0,75,1397	0/0:21,0:21:63.19:0,63,1145	0/0:28,0:28:78.25:0,78,1394	0/0:24,0:24:72.25:0,72,1349	0/0:14,0:14:39.13:0,39,729	0/0:15,0:15:45.15:0,45,827	0/0:22,0:22:66.23:0,66,1214	0/0:38,0:38:99:0,114,2129	0/0:20,0:20:57.20:0,57,1067	0/0:22,0:22:66.23:0,66,1228	0/0:24,0:24:72.23:0,72,1314	0/0:27,0:27:75.26:0,75,1394	0/0:23,0:23:69.24:0,69,1288	0/0:17,0:17:48.16:0,48,899	0/0:30,0:30:90.31:0,90,1684	0/0:7,0:7:18.06:0,18,337
chr10	18235296	.	TTTAA	T	11488.57	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=10.209;DP=622;FS=0.691;HRun=0;HaplotypeScore=111.3730;InbreedingCoeff=0.9753;MQ=83.00;MQ0=3;MQRankSum=-2.716;QD=41.93;ReadPosRankSum=5.162;VQSLOD=5.1752;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,114,2861	1/1:1,12:13:24.08:455,24,0	0/0:20,0:20:60.04:0,60,1401	0/0:18,0:18:51.10:0,51,1083	1/1:0,29:29:57.11:1041,57,0	0/0:24,0:24:69.24:0,69,1706	0/0:15,0:15:42.14:0,42,1007	0/0:32,0:32:90.31:0,90,2323	0/0:22,0:22:66.19:0,66,1576	1/1:1,26:27:75.22:1294,75,0	1/1:1,24:25:60.21:1137,60,0	0/0:21,0:21:62.41:0,62,1485	1/1:0,24:24:57.13:1042,57,0	1/1:1,26:25:48.01:831,48,0	0/0:20,0:20:57.17:0,57,1326	0/0:17,0:17:51.17:0,51,1339	1/1:2,18:19:36.12:682,36,0	0/0:19,0:19:54.16:0,54,1398	0/0:21,0:21:63.21:0,63,1647	0/0:21,0:21:63.20:0,63,1535	0/0:19,0:19:57.20:0,57,1448	0/0:14,0:14:42.14:0,42,1038	1/1:1,18:19:45.15:854,45,0	1/1:0,21:20:48.05:910,48,0	0/0:26,0:26:69.24:0,69,1707	1/1:0,36:36:99:1812,105,0	1/1:0,31:31:74.84:1374,75,0	1/1:0,2:2:3.01:57,3,0
chr10	18235954	.	A	ATGTGTGTGTGTG	9419.83	PASS	AB=1.000;AC=31;AF=0.554;AN=56;BaseQRankSum=-9.891;DP=786;FS=6.865;HRun=0;HaplotypeScore=332.8645;InbreedingCoeff=0.5951;MQ=60.85;MQ0=10;MQRankSum=3.333;QD=18.47;ReadPosRankSum=-5.182;VQSLOD=1.6344;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:42,0:42:57.30:57,0,801	0/1:16,0:16:1.14:1,0,250	0/0:42,0:27:11.09:0,11,158	0/1:31,0:13:19.89:20,0,59	0/0:46,0:46:11.51:0,12,501	1/1:27,0:27:27.05:547,27,0	1/1:14,0:14:14.93:404,15,0	1/1:41,0:41:63.77:991,64,0	1/1:19,0:20:15:311,15,0	0/1:41,0:41:99:181,0,362	0/0:22,0:22:21.60:0,22,459	1/1:28,1:30:34.95:712,35,0	0/0:42,0:42:46.65:0,47,837	0/0:24,0:24:23.93:0,24,426	1/1:22,3:25:22.79:909,23,0	1/1:28,7:35:51.10:2071,51,0	0/0:19,0:19:10.45:0,10,256	1/1:21,0:21:32.99:806,33,0	1/1:12,0:11:15.39:269,15,0	1/1:30,0:35:36.14:672,36,0	1/1:22,0:22:12.80:98,13,0	1/1:22,3:24:23.93:732,24,0	0/0:24,0:24:5.78:0,6,319	0/0:18,0:17:11.53:0,12,289	1/1:28,2:30:14.66:550,15,0	0/1:42,0:42:88.24:88,0,625	0/0:31,0:29:7.63:0,8,364	0/0:8,0:8:6.02:0,6,164
chr10	18235968	.	GTGTGTGTGTA	G	10728.41	PASS	AB=1.000;AC=33;AF=0.589;AN=56;BaseQRankSum=-4.288;DP=762;FS=4.419;HRun=0;HaplotypeScore=254.3962;InbreedingCoeff=0.3440;MQ=50.20;MQ0=13;MQRankSum=-0.594;QD=18.76;ReadPosRankSum=-0.182;VQSLOD=3.7645;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:37.60:0,38,1795	1/1:1,14:15:27.09:773,27,0	0/0:37,0:16:17.13:0,17,498	0/1:27,0:8:14.08:14,0,300	1/1:4,40:44:45.07:1285,45,0	0/1:27,0:26:3.87:4,0,441	0/1:17,0:17:50.16:50,0,112	0/1:46,0:46:79.35:79,0,2250	0/1:15,0:15:40.11:40,0,115	1/1:8,37:45:79.47:1316,79,0	1/1:5,18:23:23.67:755,24,0	0/0:30,0:30:5.80:0,6,533	1/1:4,38:42:57.10:1750,57,0	1/1:3,20:23:33.11:1016,33,0	0/1:24,0:24:32.10:32,0,303	0/1:34,0:34:1.12:1,0,980	1/1:3,13:16:9.88:287,10,0	0/0:19,0:19:14.13:0,14,804	0/0:10,0:9:16.63:0,17,390	0/1:35,0:35:19.64:20,0,837	0/1:21,0:20:50.88:51,0,250	0/0:24,0:23:21.04:0,21,683	1/1:3,21:24:18.06:558,18,0	1/1:3,17:19:9.03:283,9,0	0/0:26,0:26:14.58:0,15,422	1/1:2,35:37:90.31:1568,90,0	1/1:9,19:27:21.54:655,22,0	1/1:0,9:9:6.02:189,6,0
chr10	18235978	.	A	ATG	3457.87	PASS	AB=0.971;AC=29;AF=0.518;AN=56;BaseQRankSum=-5.222;DP=723;FS=1.172;HRun=0;HaplotypeScore=214.4286;InbreedingCoeff=0.6932;MQ=51.63;MQ0=10;MQRankSum=4.918;QD=7.82;ReadPosRankSum=-3.539;VQSLOD=2.8051;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:17,24:41:35.58:501,36,0	0/0:14,0:14:13.02:0,13,56	0/1:27,0:10:6.54:7,0,137	0/0:25,0:8:12.03:0,12,139	0/0:41,0:41:31.92:0,32,138	1/1:10,17:26:6.02:95,6,0	1/1:7,11:18:3.48:49,3,0	1/1:23,24:48:77.96:1113,78,0	1/1:7,12:19:3.48:44,3,0	0/1:38,0:38:50.16:50,0,67	0/0:20,0:20:21.75:0,22,102	1/1:19,12:31:5.89:87,6,0	0/0:40,0:40:46.16:0,46,213	0/0:21,0:21:23.17:0,23,107	1/1:10,14:24:8.69:129,9,0	1/1:13,18:31:30.09:398,30,0	0/0:14,0:14:8.87:0,9,41	1/1:9,9:18:15.05:243,15,0	1/1:9,0:9:6.02:74,6,0	1/1:13,23:37:23.81:311,24,0	0/1:17,1:17:0.04:0,0,0	1/1:10,15:24:15.05:227,15,0	0/0:22,0:22:14.03:0,14,62	0/0:18,0:18:10.77:0,11,48	1/1:16,14:30:11.59:129,12,0	0/0:37,0:37:10.65:0,11,128	0/0:20,0:19:17.06:0,17,75	0/0:9,0:9:5.60:0,6,26
chr10	18236593	.	TACACACAC	T	2773.25	PASS	AB=0.944;AC=33;AF=0.635;AN=52;BaseQRankSum=8.367;DP=590;FS=12.992;HRun=0;HaplotypeScore=145.8733;InbreedingCoeff=0.4775;MQ=59.83;MQ0=14;MQRankSum=-3.551;QD=6.83;ReadPosRankSum=-0.601;VQSLOD=1.8238;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:24:12.01:0,12,281	1/1:5,0:7:2.97:20,3,0	./.	./.	1/1:31,2:32:6.02:89,6,0	0/1:28,0:27:3.92:230,0,4	0/1:16,10:24:0:0,0,0	0/0:39,0:39:31.93:0,32,581	0/0:11,0:11:9.03:0,9,273	1/1:21,0:20:38.48:509,38,0	1/1:15,0:16:3.01:66,3,0	1/1:29,0:29:9.03:146,9,0	1/1:21,0:20:9.03:152,9,0	1/1:15,0:15:9.03:141,9,0	1/1:30,0:30:11.95:183,12,0	0/1:26,0:24:16.10:102,0,16	0/1:26,0:26:63.87:138,0,64	1/1:3,0:4:3.01:36,3,0	0/0:16,0:16:24.08:0,24,823	0/0:18,0:17:21.07:0,21,631	0/0:9,0:8:15.05:0,15,547	0/1:16,0:16:11.93:144,0,12	1/1:28,0:27:8.95:154,9,0	0/0:19,0:18:3:0,3,25	1/1:31,0:31:12.04:192,12,0	1/1:18,1:19:22.01:285,22,0	1/1:18,0:18:14.95:231,15,0	1/1:11,0:9:9.03:130,9,0
chr10	18236627	.	CACACACACAGAG	C	4878.01	PASS	AB=0.925;AC=33;AF=0.589;AN=56;BaseQRankSum=9.302;DP=614;FS=2.763;HRun=0;HaplotypeScore=155.5947;InbreedingCoeff=0.3865;MQ=53.38;MQ0=24;MQRankSum=0.867;QD=10.70;ReadPosRankSum=5.272;VQSLOD=3.0133;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:21:12.01:0,12,281	1/1:7,0:7:15.01:238,15,0	0/0:16,0:4:9.87:0,10,128	0/0:22,0:8:17.18:0,17,268	1/1:32,0:31:6.02:95,6,0	0/1:25,1:24:3.92:350,0,4	1/1:20,0:18:14.15:232,14,0	0/0:26,0:23:46.58:0,47,679	0/0:14,0:14:9.03:0,9,273	0/1:32,0:30:70.80:633,0,71	1/1:2,10:13:3.01:115,3,0	1/1:27,0:27:9.03:208,9,0	1/1:28,0:27:7.28:164,7,0	1/1:22,0:22:8.71:186,9,0	1/1:28,1:29:11.96:295,12,0	0/1:6,21:26:16.65:163,0,17	0/1:28,0:27:56.51:168,0,57	0/1:6,0:5:4.16:83,0,4	0/0:11,0:11:27.09:0,27,1050	0/0:24,0:22:37.79:0,38,1185	0/1:16,0:13:25.91:26,0,606	0/1:17,1:18:11.93:206,0,12	1/1:28,0:28:9.19:166,9,0	0/0:4,17:19:3:0,3,25	1/1:25,0:25:12.04:242,12,0	1/1:27,0:27:49.51:852,50,0	1/1:24,0:23:15:307,15,0	1/1:21,0:19:9.03:147,9,0
chr10	18236629	.	CACACACAGAG	C	6817.79	PASS	AB=0.771;AC=38;AF=0.704;AN=54;BaseQRankSum=6.370;DP=610;FS=3.056;HRun=0;HaplotypeScore=140.6439;InbreedingCoeff=0.6425;MQ=53.67;MQ0=24;MQRankSum=0.183;QD=15.05;ReadPosRankSum=4.675;VQSLOD=3.6663;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:20:9.03:0,9,188	1/1:7,0:7:12.04:315,12,0	0/0:16,0:5:10.76:0,11,130	0/0:21,0:8:16.82:0,17,268	1/1:10,21:30:6.02:154,6,0	1/1:4,20:23:15.05:452,15,0	1/1:20,0:18:14.14:232,14,0	0/0:26,0:23:38.63:0,39,431	0/0:14,0:14:9.03:0,9,207	1/1:14,18:30:7.69:976,8,0	1/1:13,0:13:3.01:82,3,0	1/1:3,23:27:9.03:282,9,0	1/1:2,25:27:7.54:300,8,0	1/1:4,18:22:8.65:286,9,0	1/1:4,24:29:11.96:334,12,0	1/1:24,3:25:5.37:178,5,0	0/1:4,21:25:31.78:239,0,32	1/1:9,0:8:17.85:299,18,0	0/0:11,0:11:27.09:0,27,831	0/0:26,0:24:37.75:0,38,858	0/1:16,0:13:25.91:26,0,476	1/1:3,15:18:9.03:275,9,0	1/1:3,24:28:8.51:247,9,0	./.	1/1:3,20:24:12.04:382,12,0	1/1:4,23:27:63.87:1025,64,0	1/1:2,22:23:15.04:480,15,0	1/1:2,19:19:9.03:256,9,0
chr10	18237259	.	CT	C	834.46	PASS	AB=0.915;AC=7;AF=0.125;AN=56;BaseQRankSum=9.133;DP=665;FS=3.997;HRun=11;HaplotypeScore=72.6588;InbreedingCoeff=0.4717;MQ=75.80;MQ0=1;MQRankSum=-2.868;QD=7.52;ReadPosRankSum=1.936;VQSLOD=2.3246;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,20:24:52.97:425,53,0	0/0:9,0:9:24.06:0,24,255	0/1:13,1:13:9.60:10,0,110	0/1:18,1:18:13.95:14,0,113	0/0:28,0:28:69.13:0,69,712	0/0:24,0:24:53.62:0,54,553	0/0:13,0:13:33.05:0,33,340	0/0:37,2:39:65.91:0,66,878	1/1:6,23:29:34.70:474,35,0	0/0:28,0:28:75.17:0,75,787	0/0:20,0:21:56.90:0,57,570	0/0:23,0:24:68.97:0,69,680	0/0:38,0:38:72.47:0,72,929	0/0:24,0:24:40.62:0,41,610	0/0:27,4:31:4.23:0,4,640	0/0:27,0:27:38.64:0,39,596	0/0:11,1:13:5.11:0,5,187	0/0:10,0:10:21.03:0,21,215	0/1:20,4:24:52.07:52,0,281	0/0:30,3:33:34.95:0,35,774	0/0:11,0:12:31.52:0,32,287	0/0:15,3:18:36.09:0,36,383	0/0:17,0:19:44.92:0,45,448	0/0:23,0:23:62.98:0,63,647	0/0:24,0:24:53.17:0,53,549	0/0:34,1:35:86.99:0,87,897	0/0:46,1:46:92.63:0,93,1180	0/0:13,0:13:30.08:0,30,320
chr10	18238453	.	CT	C	2435.93	PASS	AB=0.785;AC=29;AF=0.518;AN=56;BaseQRankSum=7.765;DP=557;FS=0.000;HRun=13;HaplotypeScore=68.2920;InbreedingCoeff=0.5102;MQ=67.63;MQ0=7;MQRankSum=-1.146;QD=6.73;ReadPosRankSum=2.055;VQSLOD=2.3556;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,1:32:39.31:127,39,0	0/1:3,12:16:20.51:187,0,21	0/1:16,1:14:6.94:7,0,84	0/0:12,0:9:8.99:0,9,80	1/1:8,12:23:9.21:206,9,0	0/0:18,1:19:39.05:0,39,374	0/0:22,2:23:4.35:0,4,353	0/0:31,1:32:41.09:0,41,529	1/1:2,0:14:25.20:78,25,0	1/1:5,18:23:47.67:350,48,0	0/1:5,7:12:2.30:91,0,2	0/0:17,1:19:23.98:0,24,326	1/1:2,12:15:19.66:137,20,0	0/1:10,9:18:5.42:129,0,5	0/0:12,1:15:7.97:0,8,226	0/1:20,3:24:10.37:10,0,367	1/1:6,19:25:9.53:233,10,0	0/0:16,1:17:39.06:0,39,378	0/0:28,0:27:60.09:0,60,579	0/1:23,3:26:8.68:9,0,400	0/0:13,0:13:15.01:0,15,140	0/1:16,2:18:1.69:2,0,299	1/1:4,17:22:8.70:232,9,0	1/1:7,20:27:5.08:302,5,0	0/0:14,0:16:38.89:0,39,360	1/1:5,9:14:26.82:197,27,0	1/1:8,8:17:16.90:114,17,0	1/1:1,12:15:10.70:223,11,0
chr10	18239012	.	CATATATAT	C	4962.88	PASS	AB=0.633;AC=39;AF=0.813;AN=48;BaseQRankSum=-2.532;DP=404;FS=15.082;HRun=0;HaplotypeScore=97.5195;InbreedingCoeff=0.2660;MQ=61.38;MQ0=10;MQRankSum=-2.717;QD=19.62;ReadPosRankSum=4.514;VQSLOD=2.6550;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	1/1:0,0:1:2.90:16,3,0	0/0:40,0:10:2.29:0,2,14	0/0:74,0:26:13.41:0,13,259	./.	1/1:7,14:21:27.09:682,27,0	1/1:6,7:13:6.02:76,6,0	1/1:17,16:34:51.13:981,51,0	1/1:4,0:4:1.82:5,2,0	0/1:7,1:13:52.79:115,0,53	./.	1/1:3,6:10:9.03:212,9,0	0/1:2,0:6:12.98:13,0,16	1/1:3,0:5:2.90:16,3,0	1/1:4,4:8:9.03:196,9,0	1/1:5,4:10:12.04:291,12,0	0/1:9,1:24:36.42:109,0,36	1/1:2,6:8:6.02:157,6,0	1/1:5,12:18:19.08:821,19,0	1/1:3,0:3:3.01:49,3,0	1/1:8,0:8:9.02:125,9,0	./.	1/1:4,0:5:3.01:50,3,0	0/0:5,0:5:2.99:0,3,23	1/1:5,8:13:21.07:548,21,0	1/1:3,0:22:33.86:381,34,0	1/1:3,0:11:11.61:62,12,0	1/1:9,0:16:8.76:57,9,0
chr10	18239032	.	TATATAG	T	1841.25	PASS	AB=1.000;AC=23;AF=0.442;AN=52;BaseQRankSum=6.117;DP=590;DS;FS=3.421;HRun=0;HaplotypeScore=115.0379;InbreedingCoeff=-0.0572;MQ=59.26;MQ0=38;MQRankSum=-6.660;QD=9.30;ReadPosRankSum=10.634;VQSLOD=0.5570;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:23.97:0,24,243	0/1:3,0:3:36.95:37,0,40	0/0:92,0:21:17.70:0,18,125	0/0:250,0:57:55.08:0,55,441	0/0:7,0:7:8.99:0,9,74	0/1:20,0:20:83.10:174,0,83	0/0:10,0:10:10.96:0,11,60	0/1:36,0:36:99:105,0,445	1/1:0,6:6:3.01:69,3,0	0/1:9,0:9:32.71:133,0,33	0/0:4,0:4:3:0,3,25	1/1:8,0:8:8.99:74,9,0	0/1:6,0:6:37.96:70,0,38	1/1:2,0:2:3.01:46,3,0	0/1:6,0:6:35.45:35,0,45	1/1:6,0:6:11.99:100,12,0	0/1:22,0:22:4.99:5,0,107	0/1:11,0:11:21.17:21,0,94	0/1:19,0:17:10.56:174,0,11	0/1:1,0:1:0:0,0,0	0/0:3,0:3:2.19:0,2,10	./.	0/1:2,0:2:0:0,0,0	./.	1/1:9,0:9:0.98:150,1,0	0/1:23,0:23:19.39:625,0,19	0/1:9,0:9:9.95:171,0,10	0/0:13,0:13:8.97:0,9,71
chr10	18239551	.	C	CCCA	515.78	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-2.001;DP=284;FS=34.634;HRun=0;HaplotypeScore=55.5508;InbreedingCoeff=0.6405;MQ=87.23;MQ0=1;MQRankSum=0.067;QD=17.19;ReadPosRankSum=3.044;VQSLOD=1.7062;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,8:14:12.04:227,12,0	0/0:6,0:6:17.97:0,18,195	0/0:24,0:22:45.83:0,46,470	0/0:12,0:11:10.10:0,10,202	0/0:6,0:6:5.99:0,6,50	0/0:8,0:8:20.96:0,21,174	0/0:10,0:10:18.20:0,18,171	0/0:16,0:16:32.95:0,33,303	1/1:4,12:16:18.15:402,18,0	0/0:4,0:4:3.01:0,3,49	0/0:5,0:5:2.73:0,3,27	0/0:10,0:10:11.81:0,12,119	0/0:8,0:8:14.97:0,15,128	0/0:10,0:10:29.87:0,30,247	0/0:17,0:17:38.67:0,39,350	0/0:14,0:14:39.03:0,39,389	0/0:15,0:15:42.94:0,43,512	0/0:8,0:8:11.95:0,12,96	0/0:8,0:8:10.49:0,10,89	0/0:5,0:5:5.94:0,6,43	0/0:17,0:17:24.39:0,24,222	0/0:5,0:5:8.99:0,9,76	0/0:5,0:5:11.96:0,12,117	0/0:15,0:15:28.11:0,28,260	0/0:5,0:5:11.73:0,12,114	0/0:7,0:7:20.92:0,21,191	0/0:10,0:10:20.96:0,21,195	0/0:4,0:4:11.97:0,12,120
chr10	18239719	.	C	CAGCAGAGCGG	1725.17	PASS	AB=1.000;AC=6;AF=0.107;AN=56;BaseQRankSum=1.300;DP=697;FS=0.000;HRun=0;HaplotypeScore=204.8452;InbreedingCoeff=0.6486;MQ=81.24;MQ0=0;MQRankSum=-4.166;QD=14.50;ReadPosRankSum=-5.337;VQSLOD=1.1806;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:20,15:36:35.99:1069,36,0	0/0:7,0:7:15.05:0,15,409	0/1:21,0:20:1.38:1,0,21	0/1:41,0:33:19.70:20,0,76	0/0:25,0:25:39.04:0,39,1021	0/0:22,0:22:39.05:0,39,984	0/0:28,0:28:55.03:0,55,1535	0/0:32,0:32:21.24:0,21,425	1/1:11,8:21:18.02:763,18,0	0/0:25,0:25:27.09:0,27,737	0/0:19,0:19:36.02:0,36,933	0/0:24,0:24:39.13:0,39,1064	0/0:28,0:28:66.13:0,66,1788	0/0:26,0:26:44.98:0,45,1264	0/0:25,0:25:57.14:0,57,1571	0/0:19,0:19:27.09:0,27,774	0/0:43,0:43:93.28:0,93,2590	0/0:32,0:32:63.22:0,63,1835	0/0:26,0:26:31.32:0,31,857	0/0:21,0:21:36.12:0,36,997	0/0:39,0:39:96.26:0,96,2616	0/0:15,0:15:24.07:0,24,652	0/0:21,0:21:39.08:0,39,976	0/0:28,0:28:63.20:0,63,1795	0/0:20,0:20:42.11:0,42,1139	0/0:24,0:24:48.16:0,48,1401	0/0:26,0:26:45.08:0,45,1145	0/0:3,0:3:6.02:0,6,179
chr10	18242813	.	G	GA	4759.61	PASS	AB=0.710;AC=25;AF=0.446;AN=56;BaseQRankSum=-9.135;DP=653;FS=14.641;HRun=12;HaplotypeScore=81.2006;InbreedingCoeff=0.7667;MQ=72.55;MQ0=3;MQRankSum=-0.041;QD=14.92;ReadPosRankSum=0.946;VQSLOD=4.1355;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,23:29:19.87:497,20,0	1/1:1,9:10:21.03:204,21,0	0/0:32,0:22:1.30:0,1,82	0/1:19,0:15:0.43:0,0,18	1/1:6,20:26:15.33:433,15,0	0/0:22,1:23:21.27:0,21,315	0/0:13,0:14:37.81:0,38,266	0/0:11,0:33:44.91:0,45,144	0/0:20,0:20:53.62:0,54,386	1/1:7,22:29:22.12:512,22,0	1/1:3,17:21:10.05:397,10,0	0/0:24,0:25:61.02:0,61,434	1/1:10,21:32:22.75:371,23,0	1/1:4,20:26:38.90:364,39,0	0/0:29,1:31:41.44:0,41,456	0/0:17,0:17:38.71:0,39,281	1/1:1,15:16:26.84:246,27,0	0/0:15,2:17:6.57:0,7,206	0/0:4,0:15:25.87:0,26,101	0/0:7,0:35:56.61:0,57,177	0/0:3,0:17:28.61:0,29,94	0/0:16,0:16:35.69:0,36,257	0/1:4,19:24:12.03:234,0,12	1/1:1,16:17:48.07:464,48,0	0/0:35,0:38:60.56:0,61,513	1/1:15,15:30:32.61:472,33,0	0/1:7,16:24:21.57:325,0,22	1/1:1,14:16:21.51:240,22,0
chr10	18242989	.	AT	A	1060.87	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.584;DP=800;FS=5.528;HRun=1;HaplotypeScore=74.0632;InbreedingCoeff=0.9407;MQ=64.59;MQ0=28;MQRankSum=-0.528;QD=21.22;ReadPosRankSum=0.178;VQSLOD=3.5614;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,28:34:63.18:810,63,0	0/0:11,0:11:33.11:0,33,524	0/0:87,2:29:80.96:0,81,1173	0/0:94,1:28:69.17:0,69,914	0/0:23,0:23:66.22:0,66,1047	0/0:20,0:20:54.18:0,54,860	0/0:14,0:14:15.22:0,15,528	0/0:33,0:32:92.97:0,93,1424	1/1:0,12:12:27.09:373,27,0	0/0:15,0:15:45.15:0,45,700	0/0:29,0:29:84.26:0,84,1312	0/0:30,0:30:84.22:0,84,1310	0/0:20,0:20:60.20:0,60,940	0/0:28,0:28:77.88:0,78,1156	0/0:29,0:29:84.29:0,84,1338	0/0:17,0:17:48.16:0,48,764	0/0:18,0:18:51.17:0,51,811	0/0:25,0:25:71.89:0,72,1070	0/0:28,0:27:72.17:0,72,1077	0/0:24,0:24:72.24:0,72,1126	0/0:38,0:37:99:0,108,1723	0/0:24,0:24:53.51:0,54,1016	0/0:27,0:27:72.24:0,72,1147	0/0:38,0:38:99:0,114,1806	0/0:29,0:29:87.30:0,87,1387	0/0:25,0:25:75.12:0,75,1161	0/0:19,0:18:54.18:0,54,857	0/0:2,0:2:6.02:0,6,96
chr10	18243793	.	CT	C	9188.42	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=0.350;DP=646;FS=1.692;HRun=2;HaplotypeScore=130.0917;InbreedingCoeff=0.9988;MQ=87.65;MQ0=0;MQRankSum=-7.135;QD=35.48;ReadPosRankSum=3.996;VQSLOD=4.3807;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:69.21:0,69,1010	1/1:0,11:11:30.10:390,30,0	0/0:18,0:18:45.10:0,45,624	0/0:26,0:26:69.18:0,69,986	1/1:0,26:26:72.23:935,72,0	0/0:31,0:31:93.29:0,93,1369	0/0:15,0:15:45.13:0,45,651	0/0:36,0:36:99:0,102,1493	0/0:18,0:18:54.18:0,54,809	1/1:2,21:23:60.19:779,60,0	1/1:1,19:20:51.17:662,51,0	0/0:30,0:30:90.30:0,90,1348	1/1:0,28:28:78.25:1011,78,0	1/1:3,30:33:81.26:1052,81,0	0/0:27,0:27:75.25:0,75,1124	0/0:31,0:31:93.32:0,93,1394	1/1:0,21:21:57.19:740,57,0	0/0:16,0:16:48.16:0,48,714	0/0:21,0:21:57.19:0,57,854	0/0:23,0:23:66.22:0,66,989	0/0:18,0:18:54.18:0,54,809	0/0:24,0:24:69.23:0,69,1034	1/1:0,20:20:54.18:701,54,0	1/1:0,14:14:39.13:506,39,0	0/0:29,0:29:87.28:0,87,1285	1/1:0,30:30:90.29:1168,90,0	1/1:0,27:27:78.25:1011,78,0	1/1:0,6:6:18.06:234,18,0
chr10	18244546	.	GGTGTGT	G	3040.62	PASS	AB=0.871;AC=24;AF=0.480;AN=50;BaseQRankSum=3.368;DP=683;FS=2.920;HRun=0;HaplotypeScore=171.2689;InbreedingCoeff=0.6650;MQ=66.35;MQ0=2;MQRankSum=-4.495;QD=9.08;ReadPosRankSum=1.025;VQSLOD=2.7594;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:47:12.04:168,12,0	0/0:7,0:7:5.99:0,6,109	./.	./.	0/0:27,0:27:21.05:0,21,425	1/1:11,6:18:14.72:263,15,0	1/1:14,7:22:12.78:259,13,0	0/1:23,0:23:42.40:43,0,42	1/1:13,0:23:5.99:275,6,0	0/0:23,0:23:45.15:0,45,990	0/0:14,0:24:0:0,0,0	1/1:11,15:30:35.58:555,36,0	0/0:24,0:23:27.56:0,28,561	0/0:29,0:29:20.16:0,20,347	1/1:8,4:15:14.26:232,14,0	1/1:15,12:30:35.17:637,35,0	0/0:23,0:28:12.92:0,13,246	1/1:11,5:17:8.99:123,9,0	0/0:12,0:13:5.36:0,5,80	0/1:15,1:23:29.09:68,0,29	1/1:33,0:40:6.48:63,6,0	1/1:8,10:20:6.02:79,6,0	0/0:20,0:20:3.01:0,3,86	0/0:29,0:28:15.05:0,15,309	1/1:11,14:27:27.05:463,27,0	0/0:30,0:30:52.69:0,53,1167	0/0:16,0:25:8.80:0,9,119	./.
chr10	18244910	.	C	CA	11862.84	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-18.968;DP=701;FS=1.600;HRun=2;HaplotypeScore=62.0112;InbreedingCoeff=0.9995;MQ=77.98;MQ0=0;MQRankSum=-0.797;QD=39.02;ReadPosRankSum=-0.251;VQSLOD=5.1806;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:93.29:0,93,1151	0/0:9,0:9:27.08:0,27,335	0/0:21,0:21:51.15:0,51,624	0/0:12,0:12:35.90:0,36,422	0/0:28,0:28:78.23:0,78,954	1/1:1,25:26:75.25:1080,75,0	1/1:0,16:16:45.15:648,45,0	1/1:3,33:36:99:1407,99,0	0/0:31,0:31:93.23:0,93,1121	0/0:36,0:36:99:0,105,1289	0/0:33,0:33:96.30:0,96,1190	1/1:1,31:32:90.30:1296,90,0	0/0:19,0:19:57.18:0,57,707	0/0:23,0:23:69.22:0,69,853	1/1:1,29:30:84.28:1210,84,0	1/1:0,31:31:78.26:1124,78,0	0/0:29,0:29:84.26:0,84,1041	1/1:0,16:16:39.13:561,39,0	1/1:3,21:24:63.21:908,63,0	1/1:1,28:29:84.28:1209,84,0	1/1:0,9:9:27.09:389,27,0	1/1:3,18:21:51.17:734,51,0	0/0:25,0:25:60.19:0,60,744	0/0:11,0:11:33.10:0,33,409	1/1:2,32:34:90.30:1296,90,0	0/0:41,0:41:99:0,120,1477	0/0:35,0:35:99:0,102,1251	0/0:9,0:9:27.08:0,27,334
chr10	18245060	.	GGCTGACCATCTGGT	G	3196.80	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.471;DP=699;FS=1.514;HRun=0;HaplotypeScore=268.7544;InbreedingCoeff=0.9987;MQ=87.51;MQ0=1;MQRankSum=-9.034;QD=66.60;ReadPosRankSum=-0.075;VQSLOD=3.1877;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,19:29:45.15:1704,45,0	0/0:8,0:8:24.08:0,24,1687	0/0:29,0:29:83.61:0,84,3998	0/0:23,0:23:65.92:0,66,2980	0/0:20,0:20:57.20:0,57,3621	0/0:25,0:25:72.25:0,72,4896	0/0:22,0:22:66.23:0,66,4196	0/0:39,0:39:99:0,111,6589	1/1:1,18:19:42.14:1615,42,0	0/0:24,0:24:66.23:0,66,4181	0/0:15,0:15:42.14:0,42,2861	0/0:34,0:34:99:0,99,6581	0/0:24,0:24:69.24:0,69,4606	0/0:24,0:24:72.25:0,72,4652	0/0:30,0:30:84.27:0,84,5710	0/0:25,0:25:69.23:0,69,4485	0/0:37,0:36:99:0,99,6299	0/0:22,0:22:63.22:0,63,4179	0/0:26,0:26:69.24:0,69,4020	0/0:24,0:24:69.22:0,69,4368	0/0:50,0:50:99:0,148,9998	0/0:20,0:20:60.21:0,60,3795	0/0:11,0:11:33.11:0,33,2109	0/0:27,0:27:72.25:0,72,4667	0/0:30,0:30:87.30:0,87,6009	0/0:28,0:28:84.28:0,84,5377	0/0:21,0:21:60.21:0,60,3994	0/0:13,0:13:39.13:0,39,2424
chr10	18247455	.	TACACACAC	T	165.77	PASS	AB=0.733;AC=8;AF=0.167;AN=48;BaseQRankSum=0.489;DP=496;FS=12.002;HRun=0;HaplotypeScore=126.1103;InbreedingCoeff=0.2648;MQ=58.31;MQ0=17;MQRankSum=-2.180;QD=1.95;ReadPosRankSum=0.920;VQSLOD=2.0724;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:15:3.01:0,3,74	0/0:6,0:6:10.28:0,10,206	0/0:16,0:8:3.01:0,3,89	0/0:18,0:12:6.02:0,6,123	0/0:21,0:20:6.02:0,6,130	./.	0/1:12,4:13:57.73:60,0,58	0/0:18,0:18:21.06:0,21,477	0/0:18,0:18:30.10:0,30,869	0/0:26,0:24:36.12:0,36,874	0/0:22,0:18:3.01:0,3,85	1/1:7,11:18:6.02:139,6,0	0/0:16,0:16:10.28:0,10,288	0/0:19,0:17:3.01:0,3,71	./.	./.	0/0:14,0:14:9:0,9,191	0/1:10,10:20:10.54:67,0,11	0/0:19,0:19:30.09:0,30,834	0/0:18,0:18:24.08:0,24,583	0/0:22,0:21:30.10:0,30,765	1/1:6,4:10:0.47:1,0,0	./.	0/0:22,0:22:15.05:0,15,452	1/1:5,15:18:0.47:1,0,0	0/0:21,0:20:35.15:0,35,826	0/0:11,0:10:11.97:0,12,226	0/0:11,0:7:9.03:0,9,223
chr10	18248420	.	A	AT	11655.51	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=4.183;DP=577;FS=5.811;HRun=0;HaplotypeScore=149.3228;InbreedingCoeff=0.9995;MQ=84.55;MQ0=0;MQRankSum=-2.502;QD=42.69;ReadPosRankSum=4.799;VQSLOD=3.7036;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,37:37:96.24:1481,96,0	1/1:0,8:8:24.08:383,24,0	0/0:20,0:20:54.12:0,54,689	0/0:20,0:20:57.15:0,57,741	1/1:0,26:26:72.11:1089,72,0	0/0:26,0:26:72.20:0,72,983	0/0:23,0:23:66.20:0,66,904	0/0:33,0:33:99:0,99,1368	1/1:1,21:22:57.19:910,57,0	1/1:0,13:13:36.12:571,36,0	1/1:0,17:17:39.13:620,39,0	0/0:18,0:18:51.16:0,51,694	1/1:0,19:19:54.18:857,54,0	1/1:0,17:17:51.17:811,51,0	0/0:26,0:26:78.20:0,78,1048	0/0:22,0:22:66.22:0,66,914	1/1:0,22:22:60.20:958,60,0	0/0:22,0:22:66.22:0,66,917	0/0:28,0:28:75.25:0,75,1048	0/0:14,0:14:42.06:0,42,529	0/0:21,0:21:63.21:0,63,876	0/0:17,0:17:48.13:0,48,634	1/1:0,9:9:27.09:429,27,0	1/1:0,17:17:48.16:765,48,0	0/0:14,0:14:42.14:0,42,581	1/1:2,27:29:81.24:1241,81,0	1/1:0,24:24:60.12:917,60,0	1/1:0,13:13:39.13:623,39,0
chr10	18248565	.	T	TTC	3205.34	PASS	AB=0.914;AC=24;AF=0.444;AN=54;BaseQRankSum=-12.252;DP=487;FS=3.423;HRun=0;HaplotypeScore=130.1926;InbreedingCoeff=0.6600;MQ=50.17;MQ0=35;MQRankSum=-1.540;QD=13.58;ReadPosRankSum=-2.643;VQSLOD=2.7585;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:32,0:32:22.06:285,0,22	1/1:5,3:10:21.61:214,22,0	0/0:21,0:8:14.94:0,15,126	0/0:11,0:3:1.43:0,1,26	1/1:22,2:23:6.24:360,6,0	0/0:22,0:22:54.81:0,55,566	0/0:13,0:11:25.96:0,26,227	0/0:33,0:31:74.21:0,74,506	1/1:9,0:10:15.87:195,16,0	1/1:14,2:15:17.45:276,17,0	0/1:11,3:15:2.25:264,0,2	0/0:14,0:13:31.17:0,31,264	1/1:11,2:13:14.44:184,14,0	0/1:16,1:16:17.92:211,0,18	0/0:14,0:13:30.08:0,30,272	0/0:19,0:19:51.53:0,52,486	1/1:23,2:19:20.19:287,20,0	0/0:20,0:19:56.85:0,57,629	0/0:22,0:20:41.31:0,41,302	0/0:20,0:18:39.14:0,39,376	./.	0/0:18,0:18:41.20:0,41,391	0/1:13,0:12:13.02:135,0,13	1/1:8,1:8:17.18:146,17,0	0/0:23,0:23:61.84:0,62,622	1/1:12,3:15:6.13:246,6,0	1/1:13,2:14:34.33:298,34,0	1/1:16,1:15:14.49:308,14,0
chr10	18248574	.	T	TC	2685.30	PASS	AB=0.941;AC=31;AF=0.554;AN=56;BaseQRankSum=6.573;DP=487;FS=37.184;HRun=0;HaplotypeScore=117.9583;InbreedingCoeff=0.4539;MQ=45.39;MQ0=35;MQRankSum=0.319;QD=7.34;ReadPosRankSum=1.337;VQSLOD=1.1959;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:30:87.56:88,0,137	0/0:10,0:10:21.67:0,22,148	1/1:12,0:3:4.07:11,4,0	0/0:11,0:3:0.37:0,0,25	0/0:20,2:21:26.62:0,27,277	1/1:21,1:22:47.51:257,48,0	1/1:14,0:11:29.75:136,30,0	1/1:31,0:29:62.94:484,63,0	0/1:8,1:9:0.09:0,0,68	0/0:16,1:16:5.36:0,5,168	0/0:15,1:16:12.92:0,13,260	1/1:14,0:12:28.39:173,28,0	0/1:13,1:13:3.71:4,0,118	0/0:16,1:16:4.05:0,4,212	1/1:17,0:15:25.64:156,26,0	1/1:21,0:20:45.70:244,46,0	0/1:26,2:20:19.10:19,0,109	1/1:21,0:19:32.34:186,32,0	1/1:21,0:19:50.47:344,50,0	1/1:21,0:18:35.83:172,36,0	0/0:3,0:2:0:0,0,0	1/1:21,0:21:39.65:219,40,0	0/0:13,1:13:15.47:0,15,169	0/0:11,0:10:10.94:0,11,104	1/1:22,1:22:58.98:321,59,0	0/1:14,0:14:1.39:1,0,201	0/1:13,1:13:21.77:22,0,78	0/1:14,2:14:33.26:33,0,71
chr10	18248583	.	T	TCC	5805.89	PASS	AC=24;AF=0.462;AN=52;BaseQRankSum=6.375;DP=391;FS=21.064;HRun=0;HaplotypeScore=100.2860;InbreedingCoeff=0.9663;MQ=42.82;MQ0=31;MQRankSum=0.359;QD=31.90;ReadPosRankSum=7.112;VQSLOD=4.8319;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:18:32.97:0,33,296	0/0:9,0:9:15:0,15,143	./.	./.	0/0:19,0:18:38.93:0,39,406	1/1:0,19:19:36.12:611,36,0	1/1:5,10:10:30.10:497,30,0	1/1:0,13:13:39.12:633,39,0	0/0:8,0:8:18.01:0,18,188	0/0:13,0:12:24:0,24,258	0/0:15,0:15:36.06:0,36,404	1/1:1,8:7:15.05:257,15,0	0/0:11,0:10:15.01:0,15,163	0/0:17,0:16:27.02:0,27,310	1/1:2,11:11:21.07:345,21,0	1/1:0,16:17:36.12:589,36,0	0/0:23,0:15:22.29:0,22,268	1/1:3,17:19:30.57:718,31,0	1/1:2,10:11:33.07:515,33,0	1/1:3,16:17:30.10:513,30,0	1/1:3,0:2:6.02:73,6,0	1/1:0,15:16:24.08:389,24,0	0/0:14,0:13:24.03:0,24,268	0/0:11,0:10:15.01:0,15,164	1/1:1,20:21:39.13:667,39,0	0/0:16,0:16:36.09:0,36,444	0/0:13,0:12:12:0,12,118	0/0:13,0:11:22.29:0,22,251
chr10	18249262	.	TA	T	380.58	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=4.835;DP=370;FS=0.000;HRun=2;HaplotypeScore=34.2326;InbreedingCoeff=0.8587;MQ=75.26;MQ0=0;MQRankSum=-1.650;QD=22.39;ReadPosRankSum=1.699;VQSLOD=3.3148;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,9:10:12.73:261,13,0	0/0:6,0:6:18.06:0,18,270	0/0:7,0:7:14.50:0,15,160	0/0:7,0:7:16.28:0,16,184	0/0:26,0:26:78.25:0,78,1148	0/0:19,0:19:57.18:0,57,835	0/0:3,0:3:9.03:0,9,135	0/0:38,0:38:99:0,108,1584	1/1:0,7:7:18.06:234,18,0	0/0:20,0:20:60.13:0,60,822	0/0:18,0:18:54.16:0,54,772	0/0:10,0:10:30.09:0,30,428	0/0:15,0:15:45.15:0,45,672	0/0:7,0:7:21.06:0,21,295	0/0:18,0:18:54.18:0,54,808	0/0:18,0:18:51.17:0,51,747	0/0:13,0:13:39.07:0,39,531	0/0:12,0:12:36.12:0,36,535	0/0:14,0:14:42.12:0,42,591	0/0:8,0:8:24.08:0,24,360	0/0:9,0:9:27.09:0,27,404	0/0:3,0:3:9.03:0,9,135	0/0:9,0:9:27.06:0,27,363	0/0:3,0:3:6.01:0,6,70	0/0:13,0:13:39.11:0,39,547	0/0:18,0:18:54.17:0,54,791	0/0:22,0:22:66.17:0,66,925	0/0:17,0:17:51.16:0,51,744
chr10	18249990	.	TTTC	T	6910.86	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=13.819;DP=339;FS=0.857;HRun=0;HaplotypeScore=49.7724;InbreedingCoeff=0.9116;MQ=67.08;MQ0=0;MQRankSum=-1.349;QD=46.07;ReadPosRankSum=4.764;VQSLOD=6.3765;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:33.09:0,33,709	1/1:0,9:9:27.09:460,27,0	0/0:6,0:6:15.05:0,15,309	0/0:1,0:1:3.01:0,3,69	1/1:1,22:23:63.22:1071,63,0	0/0:18,0:18:54.19:0,54,1245	0/0:5,0:5:15.04:0,15,302	0/0:38,0:38:99:0,111,2446	0/0:8,0:8:21.07:0,21,484	1/1:1,16:17:48.16:819,48,0	1/1:0,11:11:30.02:477,30,0	0/0:8,0:8:24.08:0,24,554	1/1:0,9:9:24.08:409,24,0	1/1:0,8:8:24.08:409,24,0	0/0:12,0:12:33.11:0,33,761	0/0:7,0:7:21.06:0,21,440	1/1:0,22:22:57.20:969,57,0	0/0:25,0:25:69.24:0,69,1557	0/0:12,0:12:36.11:0,36,788	0/0:10,0:10:30.10:0,30,692	0/0:7,0:7:21.05:0,21,439	0/0:1,0:1:3:0,3,25	1/1:0,4:4:9.03:153,9,0	1/1:0,2:2:3.01:51,3,0	0/0:18,0:18:54.17:0,54,1201	1/1:1,24:25:69.24:1177,69,0	1/1:0,10:10:27.09:457,27,0	1/1:0,10:10:27.09:458,27,0
chr10	18255533	.	AAAAAAAGAG	A	1172.27	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=2.591;DP=599;FS=54.646;HRun=0;HaplotypeScore=132.0158;InbreedingCoeff=0.6821;MQ=47.05;MQ0=23;MQRankSum=1.918;QD=8.62;ReadPosRankSum=1.920;VQSLOD=0.6342;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:41:30.14:0,30,352	0/0:10,0:10:30.10:0,30,668	0/0:54,0:5:11.19:0,11,182	0/0:64,0:17:18.36:0,18,299	0/0:23,0:23:35.24:0,35,627	1/1:10,0:10:17.58:255,18,0	1/1:15,0:15:23.62:261,24,0	0/0:38,0:30:72.55:0,73,946	0/1:11,0:11:23.92:24,0,120	0/0:27,0:26:69.23:0,69,1477	0/0:20,0:20:53.45:0,53,1017	1/1:6,8:14:2.49:84,2,0	0/0:16,0:15:34.66:0,35,820	0/0:14,0:14:13.60:0,14,275	0/1:24,0:23:0.23:0,0,11	1/1:14,0:12:12.53:178,13,0	0/0:25,0:25:63.98:0,64,1116	0/1:12,0:11:11.92:193,0,12	0/0:15,0:13:30.36:0,30,646	0/0:13,0:13:32.91:0,33,588	0/0:6,0:6:8.87:0,9,73	1/1:11,0:10:12.34:136,12,0	0/0:16,0:15:14.94:0,15,287	0/0:18,0:18:12.51:0,13,304	1/1:10,15:25:7.98:218,8,0	0/0:27,0:26:72.17:0,72,1448	0/0:22,0:22:63.19:0,63,1357	0/0:12,0:10:27.06:0,27,432
chr10	18255537	.	AAAGAG	A	1249.86	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=1.179;DP=591;FS=43.553;HRun=0;HaplotypeScore=105.8080;InbreedingCoeff=0.6471;MQ=50.68;MQ0=20;MQRankSum=0.164;QD=8.33;ReadPosRankSum=2.360;VQSLOD=0.5594;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:42,0:40:26.60:50,0,27	0/0:11,0:11:23.87:0,24,400	0/0:54,0:8:17.02:0,17,159	0/0:66,0:18:32.76:0,33,437	0/0:26,0:26:28.87:0,29,335	1/1:7,0:7:21.02:235,21,0	1/1:12,0:12:27.07:350,27,0	0/0:45,0:37:38.25:0,38,240	0/1:12,0:12:8.24:62,0,8	0/0:26,0:25:48.06:0,48,682	0/0:19,0:19:37.48:0,37,511	1/1:10,0:10:5.02:50,5,0	0/0:18,0:17:34.16:0,34,517	0/0:13,0:13:12.04:0,12,208	1/1:20,0:19:2.22:44,2,0	1/1:10,0:8:18.48:165,18,0	0/0:26,0:26:45.70:0,46,618	0/1:11,0:10:31.17:186,0,31	0/0:16,0:15:20.32:0,20,209	0/0:14,0:14:20.76:0,21,213	0/0:7,0:7:0.19:0,0,2	1/1:2,4:6:14.66:167,15,0	0/0:17,0:16:12.51:0,13,206	0/0:19,0:19:12.04:0,12,220	1/1:20,0:20:8.83:126,9,0	0/0:27,0:26:45.97:0,46,800	0/0:23,0:23:45.40:0,45,675	0/0:13,0:11:23.27:0,23,183
chr10	18255538	.	A	AG	1464.96	PASS	AB=0.895;AC=19;AF=0.339;AN=56;BaseQRankSum=-3.800;DP=594;FS=16.556;HRun=0;HaplotypeScore=102.5998;InbreedingCoeff=0.3263;MQ=50.18;MQ0=21;MQRankSum=4.765;QD=6.03;ReadPosRankSum=5.296;VQSLOD=1.7393;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:41:15.84:0,16,76	1/1:10,1:11:10.28:156,10,0	0/0:55,0:8:11.01:0,11,108	0/0:69,0:19:15.16:0,15,150	0/1:15,13:28:30.72:74,0,31	0/0:7,0:7:20.03:0,20,130	0/0:12,0:12:16.05:0,16,151	0/0:46,0:38:77.69:0,78,401	0/0:13,0:13:9.59:0,10,43	0/1:10,12:23:22.36:243,0,22	0/1:17,1:18:35.57:134,0,36	0/1:10,0:10:2.70:4,0,3	0/1:18,0:17:23.86:140,0,24	1/1:13,0:14:11.12:78,11,0	0/0:20,0:19:3.45:0,3,8	0/0:10,0:8:18.73:0,19,128	0/1:25,0:25:26.71:193,0,27	0/0:12,0:11:8.07:0,8,94	0/0:16,0:15:36.14:0,36,185	0/0:16,0:16:25.56:0,26,127	0/0:6,0:6:5.88:0,6,37	0/0:6,0:6:14.08:0,14,78	1/1:16,1:16:5.49:61,5,0	1/1:19,1:20:11.47:96,11,0	0/0:20,0:20:1.83:0,2,4	1/1:25,0:24:3.47:258,3,0	1/1:22,0:22:0.80:194,1,0	0/1:11,0:9:0.65:1,0,91
chr10	18255539	.	AGAGAG	A	675.45	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=-0.085;DP=535;FS=0.576;HRun=0;HaplotypeScore=101.3112;InbreedingCoeff=0.5518;MQ=51.73;MQ0=19;MQRankSum=-5.636;QD=3.63;ReadPosRankSum=-2.644;VQSLOD=1.4518;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:10,28:37:10.66:118,11,0	0/0:9,0:9:19.27:0,19,516	0/0:54,0:11:26.40:0,26,404	0/0:71,0:19:38.22:0,38,742	0/0:25,0:26:12.33:0,12,485	1/1:7,0:7:16.62:88,17,0	1/1:12,0:12:25.95:161,26,0	0/0:34,0:31:33.99:0,34,493	1/1:3,9:12:10.89:128,11,0	0/0:25,0:24:4.35:0,4,881	0/0:14,0:15:28.02:0,28,658	1/1:10,0:10:1.98:34,2,0	0/0:16,0:15:26.18:0,26,645	0/0:12,0:12:14.64:0,15,352	1/1:19,0:19:4.20:31,4,0	0/1:9,0:8:6.17:50,0,6	0/0:20,0:20:23.26:0,23,764	0/1:13,0:12:57.71:73,0,58	0/0:8,0:7:16.93:0,17,174	0/1:13,0:13:6.05:6,0,219	0/0:6,0:6:5.50:0,6,46	1/1:6,0:6:13.02:86,13,0	0/0:12,0:11:11.72:0,12,288	0/0:19,0:19:17.80:0,18,434	1/1:19,0:19:10.23:77,10,0	0/0:20,0:22:26.45:0,26,997	0/1:18,0:18:8.25:8,0,776	0/1:9,0:7:2.44:2,0,129
chr10	18255555	.	AGAGT	A	290.51	PASS	AB=0.953;AC=10;AF=0.179;AN=56;BaseQRankSum=6.502;DP=526;FS=48.276;HRun=0;HaplotypeScore=105.7685;InbreedingCoeff=-0.2132;MQ=72.28;MQ0=11;MQRankSum=-2.944;QD=2.09;ReadPosRankSum=3.645;VQSLOD=-0.1332;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:26:22.38:22,0,57	0/0:7,0:7:21.07:0,21,470	0/0:56,0:24:25.55:0,26,568	0/0:80,0:32:54.09:0,54,939	0/0:25,0:25:48.23:0,48,668	0/1:14,0:14:42.48:42,0,113	0/1:14,1:15:81.67:141,0,82	0/0:38,0:37:99:0,102,979	0/1:10,0:10:30.92:31,0,78	0/0:17,0:17:51.15:0,51,1001	0/0:13,0:13:38.33:0,38,713	0/1:8,0:8:15.37:15,0,41	0/0:19,0:18:38.99:0,39,776	0/0:11,0:11:27.05:0,27,472	0/1:4,9:13:7.75:8,0,63	0/1:13,0:13:32.83:33,0,119	0/0:21,0:21:54.07:0,54,943	0/1:11,0:10:24.35:64,0,24	0/0:9,0:9:21.49:0,21,235	0/0:14,0:14:19.91:0,20,385	0/0:9,0:9:23.92:0,24,192	0/1:11,0:11:42.49:42,0,115	0/0:11,0:10:20.79:0,21,364	0/0:18,0:18:29.60:0,30,530	0/1:18,0:18:34.50:34,0,46	0/0:15,0:15:45.10:0,45,939	0/0:16,0:16:44.97:0,45,794	0/0:8,0:8:21.02:0,21,295
chr10	18259801	.	T	TC	649.94	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-4.571;DP=545;FS=1.833;HRun=3;HaplotypeScore=56.3488;InbreedingCoeff=0.9921;MQ=85.54;MQ0=0;MQRankSum=-1.567;QD=30.95;ReadPosRankSum=-0.219;VQSLOD=3.3022;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,21:21:54.18:745,54,0	0/0:9,0:9:27.06:0,27,304	0/0:30,0:30:57.55:0,58,743	0/0:15,0:14:21.17:0,21,215	0/0:21,0:21:63.18:0,63,744	0/0:23,0:23:63.19:0,63,754	0/0:11,0:11:33.10:0,33,395	0/0:28,0:28:69.19:0,69,806	0/0:13,0:13:39.12:0,39,466	0/0:26,0:26:69.21:0,69,826	0/0:21,0:21:57.17:0,57,673	0/0:22,0:22:66.17:0,66,764	0/0:23,0:23:69.21:0,69,826	0/0:15,0:15:39.10:0,39,454	0/0:23,0:23:66.16:0,66,754	0/0:28,0:28:81.22:0,81,948	0/0:17,0:17:51.12:0,51,579	0/0:9,0:9:24.05:0,24,274	0/0:16,0:16:48.08:0,48,546	0/0:19,0:19:57.15:0,57,660	0/0:17,0:17:51.12:0,51,584	0/0:14,0:14:39.10:0,39,457	0/0:27,0:27:78.23:0,78,922	0/0:10,0:10:30.09:0,30,359	0/0:20,0:20:60.18:0,60,717	0/0:26,0:26:75.20:0,75,871	0/0:21,0:21:60.18:0,60,711	0/0:20,0:20:48.15:0,48,574
chr10	18260830	.	TGG	T	1805.34	PASS	AB=0.830;AC=28;AF=0.519;AN=54;BaseQRankSum=-2.877;DP=312;FS=1.470;HRun=12;HaplotypeScore=46.1049;InbreedingCoeff=0.6860;MQ=75.93;MQ0=0;MQRankSum=-1.015;QD=10.20;ReadPosRankSum=3.736;VQSLOD=0.7909;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:9,0:10:4.80:5,0,110	./.	0/0:14,0:15:20.87:0,21,164	0/0:11,0:10:7.20:0,7,56	0/0:5,0:8:9.30:0,9,31	1/1:5,5:11:12.02:122,12,0	1/1:5,11:16:27.05:275,27,0	1/1:4,11:15:24:244,24,0	0/0:6,0:6:15.05:0,15,214	0/0:5,0:10:13.43:0,13,67	0/0:4,0:5:0:0,0,0	1/1:5,6:12:8.72:73,9,0	0/1:6,2:9:20.46:20,0,28	0/0:8,0:11:16.48:0,16,102	1/1:3,13:16:33.06:335,33,0	1/1:2,4:6:12.03:122,12,0	0/0:13,0:28:25.95:0,26,118	1/1:4,7:11:15.02:153,15,0	1/1:2,7:9:21.04:213,21,0	1/1:8,4:12:11.69:103,12,0	1/1:10,9:19:14.84:152,15,0	1/1:8,6:14:12.02:122,12,0	1/1:4,0:8:2.70:30,3,0	0/0:2,0:5:2.50:0,2,9	1/1:3,5:8:3:31,3,0	0/0:3,0:8:10.96:0,11,62	0/0:12,0:13:8.46:0,8,53	0/0:9,0:10:8.48:0,8,56
chr10	18260977	.	CTTA	C	8622.29	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=14.465;DP=561;FS=16.248;HRun=0;HaplotypeScore=84.0794;InbreedingCoeff=0.9969;MQ=80.07;MQ0=0;MQRankSum=-3.793;QD=39.19;ReadPosRankSum=5.711;VQSLOD=4.5197;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:90.31:0,90,2037	1/1:0,5:5:15.05:250,15,0	0/0:19,0:19:48.04:0,48,979	0/0:16,0:16:48.16:0,48,931	1/1:0,25:25:51.13:819,51,0	0/0:19,0:19:54.18:0,54,1192	0/0:21,0:21:63.20:0,63,1378	0/0:35,0:35:99:0,102,2252	0/0:11,0:11:33.11:0,33,748	1/1:2,13:15:39.13:644,39,0	1/1:0,10:10:21.07:349,21,0	0/0:17,0:17:51.18:0,51,1156	1/1:2,18:20:48.16:799,48,0	1/1:0,23:22:57.19:949,57,0	0/0:21,0:21:63.22:0,63,1399	0/0:20,0:20:60.21:0,60,1343	1/1:1,25:26:56.98:920,57,0	0/0:20,0:20:60.21:0,60,1300	0/0:29,0:29:84.29:0,84,1884	0/0:18,0:18:54.19:0,54,1220	0/0:21,0:21:63.22:0,63,1373	0/0:16,0:16:45.11:0,45,949	1/1:0,11:11:27.09:449,27,0	1/1:2,20:22:39.21:650,39,0	0/0:26,0:26:75.26:0,75,1683	1/1:2,23:25:69.24:1146,69,0	1/1:0,26:25:69.24:1149,69,0	1/1:0,12:11:30.10:499,30,0
chr10	18262516	.	A	AT	9982.53	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-14.461;DP=625;FS=9.185;HRun=6;HaplotypeScore=59.1267;InbreedingCoeff=0.9859;MQ=81.75;MQ0=0;MQRankSum=-1.598;QD=33.28;ReadPosRankSum=1.933;VQSLOD=4.8919;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:75.17:0,75,765	1/1:0,10:10:24.08:302,24,0	0/0:22,0:22:7.02:0,7,261	0/0:9,0:10:16.59:0,17,107	1/1:2,28:30:84.23:1039,84,0	0/0:26,0:26:75.17:0,75,765	0/0:12,0:12:33.07:0,33,337	0/0:28,0:28:75.13:0,75,746	0/0:13,0:13:30.06:0,30,306	1/1:3,32:35:99:1230,102,0	1/1:2,23:25:63.16:769,63,0	0/0:26,0:26:78.16:0,78,789	1/1:1,19:20:54.17:679,54,0	1/1:0,15:15:42.13:528,42,0	0/0:24,0:25:65.17:0,65,643	0/0:21,0:21:60.11:0,60,603	1/1:2,26:28:75.24:943,75,0	0/0:11,0:11:30.07:0,30,306	0/0:20,0:21:53.13:0,53,520	0/0:18,0:18:51.11:0,51,520	0/0:24,0:24:63.12:0,63,635	0/0:21,0:21:63.13:0,63,637	1/1:1,35:36:90.29:1132,90,0	1/1:2,22:24:60.19:755,60,0	0/0:21,0:21:51.11:0,51,520	1/1:1,20:21:60.19:755,60,0	1/1:1,38:38:99:1359,108,0	1/1:0,17:17:39.12:491,39,0
chr10	18262642	.	TGAAGGCGG	T	1247.75	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.387;DP=593;FS=11.341;HRun=0;HaplotypeScore=146.4416;InbreedingCoeff=0.9938;MQ=83.89;MQ0=0;MQRankSum=-6.712;QD=65.67;ReadPosRankSum=0.703;VQSLOD=3.4518;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,113,4445	0/0:7,0:7:21.06:0,21,817	0/0:26,0:26:75.24:0,75,3133	0/0:29,0:29:72.21:0,72,2845	0/0:17,0:17:51.18:0,51,2071	0/0:29,0:29:81.26:0,81,3264	0/0:16,0:16:48.16:0,48,2049	0/0:23,0:23:60.21:0,60,2450	1/1:1,18:19:48.16:1343,48,0	0/0:23,0:23:60.21:0,60,2322	0/0:21,0:21:63.22:0,63,2529	0/0:22,0:22:60.21:0,60,2613	0/0:20,0:20:60.19:0,60,2449	0/0:21,0:21:63.22:0,63,2662	0/0:8,0:8:24.08:0,24,1017	0/0:18,0:18:54.17:0,54,2128	0/0:25,0:25:60.21:0,60,2599	0/0:22,0:22:60.21:0,60,2553	0/0:24,0:24:57.18:0,57,2208	0/0:19,0:19:57.16:0,57,2159	0/0:20,0:20:54.19:0,54,2341	0/0:16,0:16:42.14:0,42,1609	0/0:19,0:19:45.15:0,45,1776	0/0:26,0:26:69.24:0,69,3031	0/0:18,0:18:54.17:0,54,2113	0/0:25,0:25:75.24:0,75,2984	0/0:27,0:27:78.25:0,78,3322	0/0:13,0:13:39.13:0,39,1715
chr10	18264581	.	G	GAACACCC	34997.55	PASS	AB=0.969;AC=29;AF=0.518;AN=56;BaseQRankSum=11.520;DP=759;FS=6.584;HRun=0;HaplotypeScore=178.5988;InbreedingCoeff=0.9285;MQ=55.34;MQ0=1;MQRankSum=-21.130;QD=86.63;ReadPosRankSum=0.418;VQSLOD=5.3894;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,20:32:75.19:2702,75,0	1/1:4,10:15:39.09:1302,39,0	0/0:24,0:23:51.55:0,52,1516	0/0:24,0:24:69.24:0,69,1747	1/1:10,23:35:69.04:2764,69,0	0/0:32,0:32:93.32:0,93,2364	0/0:20,0:20:60.21:0,60,1496	0/0:33,0:33:93.31:0,93,2399	1/1:5,23:29:81.28:3254,81,0	1/1:10,13:23:63.21:2271,63,0	1/1:5,13:19:45.15:1765,45,0	0/0:24,0:24:69.24:0,69,1852	1/1:4,28:35:99:3985,102,0	1/1:10,16:29:78.23:2779,78,0	0/0:37,0:37:99:0,111,2846	0/1:30,1:31:29.20:29,0,2301	1/1:7,7:15:39.13:1512,39,0	0/0:41,0:40:93.44:0,93,2788	0/0:22,0:22:66.21:0,66,1717	0/0:26,0:26:78.25:0,78,1984	0/0:35,0:35:99:0,102,2525	0/0:22,0:22:60.21:0,60,1579	1/1:7,14:23:48.12:1740,48,0	1/1:6,16:25:45.05:1717,45,0	0/0:14,0:14:42.14:0,42,1132	1/1:8,29:40:99:3965,111,0	1/1:8,27:40:99:3968,102,0	1/1:3,8:12:33.11:1245,33,0
chr10	18266984	.	GGTGTGTGTGTGTGT	G	3702	PASS	AB=0.750;AC=26;AF=0.500;AN=52;BaseQRankSum=6.123;DP=631;FS=17.038;HRun=0;HaplotypeScore=227.7542;InbreedingCoeff=0.0675;MQ=64.52;MQ0=24;MQRankSum=-4.827;QD=8.96;ReadPosRankSum=1.138;VQSLOD=1.3946;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:19:19.37:0,19,319	1/1:4,2:6:5.91:181,6,0	./.	./.	0/0:11,13:24:0:0,0,0	0/1:11,0:15:7.64:87,0,8	0/0:16,0:16:17.42:0,17,136	0/0:32,0:40:8.89:0,9,59	0/0:21,0:26:26.90:0,27,387	0/1:13,10:25:14.17:495,0,14	0/0:5,4:8:2.99:0,3,24	0/1:15,0:19:99:170,0,199	1/1:14,9:22:3.01:117,3,0	0/1:15,10:24:28.44:245,0,28	0/1:28,0:32:99:112,0,169	1/1:7,2:23:13.75:314,14,0	0/1:18,2:18:12.65:111,0,13	1/1:15,0:18:6.88:138,7,0	0/0:15,0:11:0.89:0,1,2	0/1:9,0:26:0.43:560,0,0	1/1:43,0:42:0.47:1,0,0	0/0:14,0:13:21.02:0,21,425	0/1:7,12:19:15.44:200,0,15	1/1:19,10:28:5.98:107,6,0	0/1:17,0:30:71.69:72,0,225	0/1:19,0:22:9.17:205,0,9	1/1:11,8:19:6.15:471,6,0	1/1:8,5:11:3.01:117,3,0
chr10	18267455	.	GATTCCTTT	G	750.47	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.491;DP=666;FS=0.000;HRun=0;HaplotypeScore=165.8084;InbreedingCoeff=0.9995;MQ=87.61;MQ0=0;MQRankSum=-4.853;QD=44.15;ReadPosRankSum=-1.329;VQSLOD=2.6135;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,15:17:33.11:845,33,0	0/0:15,0:15:39.13:0,39,1713	0/0:20,0:20:54.19:0,54,2268	0/0:28,0:28:71.83:0,72,2385	0/0:43,0:43:99:0,123,5176	0/0:17,0:17:48.16:0,48,1972	0/0:23,0:23:66.23:0,66,2905	0/0:35,0:35:93.32:0,93,3982	0/0:19,0:19:54.19:0,54,2369	0/0:23,0:23:66.23:0,66,2793	0/0:38,0:38:99:0,111,4753	0/0:19,0:19:54.19:0,54,2322	0/0:19,0:19:57.20:0,57,2440	0/0:24,0:24:69.24:0,69,2978	0/0:24,0:24:69.24:0,69,2981	0/0:31,0:31:87.27:0,87,3560	0/0:17,0:17:51.18:0,51,2179	0/0:13,0:13:36.12:0,36,1538	0/0:25,0:25:69.24:0,69,2900	0/0:24,0:24:72.23:0,72,3046	0/0:23,0:23:60.21:0,60,2523	0/0:25,0:25:72.24:0,72,2862	0/0:28,0:28:84.29:0,84,3656	0/0:17,0:17:48.16:0,48,2102	0/0:24,0:24:66.23:0,66,2778	0/0:31,0:31:84.29:0,84,3661	0/0:30,0:30:84.29:0,84,3531	0/0:14,0:14:42.14:0,42,1848
chr10	18267826	.	CTTT	C	6258.58	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-9.852;DP=545;FS=1.656;HRun=14;HaplotypeScore=98.5577;InbreedingCoeff=0.9827;MQ=68.96;MQ0=0;MQRankSum=0.640;QD=24.45;ReadPosRankSum=6.388;VQSLOD=4.1390;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:2,0:18:42.14:0,42,602	1/1:0,12:13:32.99:369,33,0	0/0:21,0:11:9.40:0,9,127	0/0:11,0:8:12.41:0,12,106	1/1:3,28:31:66.05:771,66,0	0/0:3,0:10:24.56:0,25,204	0/0:2,0:18:37.13:0,37,297	0/0:14,0:30:64.76:0,65,940	0/0:7,0:16:45.15:0,45,685	1/1:5,17:23:50.98:578,51,0	1/1:2,22:26:51.51:593,52,0	0/0:4,0:17:35.39:0,35,274	1/1:3,21:24:50.81:596,51,0	1/1:10,13:23:42:491,42,0	0/0:5,0:13:22.17:0,22,163	0/0:6,0:22:53.34:0,53,462	1/1:5,9:15:22.58:278,23,0	0/0:5,0:14:32.85:0,33,247	0/0:5,0:15:42.13:0,42,626	0/0:5,0:28:75.25:0,75,1132	0/0:7,0:16:24.06:0,24,339	0/0:4,0:16:32.02:0,32,234	1/1:3,18:21:38.83:456,39,0	1/1:1,4:5:12.02:140,12,0	0/0:4,0:21:53.82:0,54,448	1/1:5,23:29:68.98:789,69,0	1/1:6,23:31:61.62:716,62,0	1/1:0,15:15:42.12:483,42,0
chr10	18268549	.	A	AACCCT	1179.79	PASS	AB=0.978;AC=14;AF=0.250;AN=56;BaseQRankSum=7.499;DP=749;FS=26.582;HRun=0;HaplotypeScore=205.3166;InbreedingCoeff=-0.3463;MQ=35.74;MQ0=41;MQRankSum=-5.000;QD=3.06;ReadPosRankSum=4.556;VQSLOD=1.0712;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:26:65.05:0,65,1077	0/0:16,0:16:18.56:0,19,130	0/0:40,0:8:0.09:0,0,100	0/0:38,0:7:3.54:0,4,71	0/0:19,0:17:30.51:0,31,299	0/0:27,0:24:15.12:0,15,862	0/1:28,0:23:99:126,0,362	0/1:40,0:31:29:29,0,1150	0/0:18,0:18:26.57:0,27,529	0/1:25,0:25:99:112,0,192	0/1:27,0:26:0.83:1,0,191	0/0:33,0:33:14.24:0,14,1201	0/0:27,0:25:7.34:0,7,276	0/1:32,0:31:38.41:38,0,831	0/0:40,0:37:35.71:0,36,1460	0/1:30,0:29:99:176,0,920	0/1:15,0:15:9.73:10,0,198	0/1:15,0:14:32.08:32,0,563	0/1:18,0:9:99:168,0,166	0/1:26,15:41:99:418,0,709	0/0:25,0:21:32:0,32,659	0/1:47,1:47:99:144,0,1415	0/0:20,0:17:22.21:0,22,149	0/0:17,0:17:6.03:0,6,362	0/1:38,0:36:46.10:46,0,1150	0/1:23,0:23:0.13:0,0,239	0/0:16,0:16:2.74:0,3,226	0/1:3,0:3:15.10:22,0,15
chr10	18268566	.	A	AACCCT	2864.31	PASS	AB=0.983;AC=18;AF=0.321;AN=56;BaseQRankSum=10.286;DP=821;FS=44.848;HRun=0;HaplotypeScore=217.5452;InbreedingCoeff=-0.3177;MQ=52.32;MQ0=41;MQRankSum=-5.906;QD=5.99;ReadPosRankSum=-0.323;VQSLOD=1.3712;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:30:70.77:0,71,1381	0/1:14,0:13:36.41:92,0,36	0/1:55,0:21:10.22:10,0,385	0/0:56,0:23:29.83:0,30,612	0/1:18,1:18:99:151,0,156	0/0:31,0:28:35.56:0,36,1409	0/1:26,1:22:71.18:71,0,776	0/0:38,0:30:53.57:0,54,1379	0/0:16,0:16:44.51:0,45,810	0/1:29,1:29:95.17:486,0,95	0/1:24,1:24:99:115,0,155	0/0:35,0:35:99:0,99,1762	0/1:34,0:33:99:195,0,172	0/1:32,1:33:99:478,0,213	0/0:44,0:41:78.84:0,79,1937	0/0:34,0:32:38.61:0,39,1552	0/1:15,0:15:70.75:71,0,121	0/0:18,0:17:44.16:0,44,758	0/0:11,0:7:15.94:0,16,285	0/1:36,0:34:63.93:64,0,1058	0/0:29,0:25:59.99:0,60,986	0/1:51,1:51:99:111,0,2051	0/1:18,0:15:74.03:74,0,92	0/1:25,0:25:44.16:48,0,44	0/1:37,1:37:99:170,0,1520	0/1:26,0:26:99:325,0,162	0/1:25,0:26:73.40:385,0,73	1/1:4,1:5:10.28:183,10,0
chr10	18268573	.	ACCCTAC	A	6498.79	PASS	AB=0.642;AC=13;AF=0.232;AN=56;BaseQRankSum=6.323;DP=854;FS=44.019;HRun=0;HaplotypeScore=204.3714;InbreedingCoeff=-0.1081;MQ=60.85;MQ0=33;MQRankSum=-6.209;QD=23.29;ReadPosRankSum=0.726;VQSLOD=2.8377;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:31:80.19:0,80,1967	0/1:7,7:13:63.96:267,0,64	0/0:58,0:27:70:0,70,985	0/0:62,0:29:81.21:0,81,1221	0/1:12,7:18:99:513,0,120	0/0:34,0:31:87.17:0,87,2302	0/0:29,0:25:63.07:0,63,1475	0/0:40,0:34:92.82:0,93,1615	0/0:16,0:16:42.09:0,42,1291	0/1:18,12:29:99:944,0,425	0/1:10,15:24:99:594,0,207	0/0:37,0:37:99:0,99,2635	0/1:5,32:36:99:865,0,138	0/1:26,8:34:99:915,0,581	0/0:44,0:42:99:0,120,3086	0/0:34,0:33:95.03:0,95,2521	0/1:5,12:17:57.01:219,0,57	0/0:19,0:18:36.39:0,36,1169	0/0:7,0:6:15.05:0,15,405	0/0:33,0:32:42.08:0,42,1902	0/0:34,0:31:69.05:0,69,1559	0/0:56,0:55:99:0,138,3394	0/1:9,11:17:99:336,0,101	1/1:0,21:21:15.05:358,15,0	0/0:39,0:38:99:0,99,2616	0/1:4,24:28:99:982,0,325	0/1:8,21:29:99:387,0,410	0/1:2,3:5:69.52:119,0,70
chr10	18269975	.	GTATTATTATTATATTA	G	3728.84	PASS	AB=1.000;AC=27;AF=0.519;AN=52;BaseQRankSum=-1.588;DP=245;FS=0.000;HRun=0;HaplotypeScore=109.6246;InbreedingCoeff=0.6256;MQ=75.53;MQ0=2;MQRankSum=-5.701;QD=29.13;ReadPosRankSum=2.978;VQSLOD=2.3084;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:18:47.15:786,47,0	./.	0/0:12,0:9:3.01:0,3,39	0/0:10,0:4:3.01:0,3,75	1/1:10,10:20:22.78:631,23,0	0/0:4,0:4:8.89:0,9,105	0/0:3,0:3:2.99:0,3,24	0/0:27,0:27:56.13:0,56,888	1/1:6,0:6:12.01:130,12,0	1/1:0,5:5:12.03:251,12,0	1/1:2,3:5:6.02:271,6,0	./.	1/1:2,7:9:6.02:271,6,0	1/1:4,0:4:3.01:45,3,0	0/0:8,0:8:9.03:0,9,166	0/0:7,0:7:12.02:0,12,155	1/1:17,0:17:18.06:428,18,0	0/1:9,0:9:47.75:48,0,187	0/0:12,0:12:15.03:0,15,584	0/0:11,0:11:12.02:0,12,121	0/0:1,0:1:3.01:0,3,30	0/0:5,0:5:8.86:0,9,91	1/1:1,3:4:3.01:136,3,0	1/1:2,0:2:3.01:62,3,0	0/0:12,0:12:26.87:0,27,469	1/1:7,0:7:10.56:128,11,0	1/1:5,9:14:5.54:271,6,0	1/1:5,2:7:6.02:271,6,0
chr10	18269986	.	A	AT	1219.21	PASS	AB=0.917;AC=17;AF=0.327;AN=52;BaseQRankSum=-1.870;DP=185;FS=5.700;HRun=2;HaplotypeScore=49.9316;InbreedingCoeff=0.3903;MQ=56.22;MQ0=4;MQRankSum=-2.177;QD=11.72;ReadPosRankSum=-1.284;VQSLOD=1.3949;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:11,5:17:43.04:599,43,0	./.	0/0:8,0:3:3.01:0,3,39	0/0:15,0:1:3.01:0,3,39	0/1:13,1:14:7.46:47,0,7	0/0:3,0:3:7.50:0,8,46	0/0:1,0:1:2.99:0,3,24	0/1:29,0:29:97.19:146,0,97	1/1:4,0:4:12.03:154,12,0	1/1:5,0:5:2.53:84,3,0	0/0:3,0:3:3.63:0,4,10	./.	0/0:8,0:8:3.63:0,4,11	1/1:2,0:2:3.01:45,3,0	0/0:3,0:3:8.20:0,8,59	0/0:4,0:4:8.31:0,8,57	1/1:18,1:18:11.44:110,11,0	0/1:7,2:9:16.23:65,0,16	0/0:5,0:5:12.04:0,12,146	0/0:4,0:4:8.46:0,8,54	0/0:1,0:1:2.22:0,2,7	0/0:3,0:3:9.03:0,9,107	0/0:3,0:3:1.82:0,2,5	1/1:0,1:1:3.01:32,3,0	0/0:9,0:9:21.33:0,21,88	1/1:4,0:4:11.65:95,12,0	0/0:9,0:9:3.41:0,3,10	0/0:2,0:2:3.63:0,4,10
chr10	18269987	.	TATTA	T	2203.49	PASS	AB=1.000;AC=31;AF=0.596;AN=52;BaseQRankSum=2.854;DP=182;FS=2.493;HRun=0;HaplotypeScore=53.9055;InbreedingCoeff=0.3456;MQ=53.09;MQ0=4;MQRankSum=-5.541;QD=18.83;ReadPosRankSum=4.570;VQSLOD=3.0554;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,9:17:47.19:678,47,0	./.	0/0:7,0:2:3.01:0,3,39	0/0:15,0:1:3.01:0,3,75	1/1:12,2:14:24.07:353,24,0	0/1:3,0:3:10.06:10,0,34	0/0:1,0:1:2.99:0,3,24	0/0:29,0:29:68.86:0,69,580	1/1:1,3:4:12.03:146,12,0	1/1:5,0:5:9.03:122,9,0	1/1:3,0:3:6.02:66,6,0	./.	1/1:7,0:7:6.02:65,6,0	1/1:0,2:2:3.01:45,3,0	0/1:3,0:3:25.27:25,0,30	0/1:4,0:4:4.63:5,0,79	1/1:3,15:17:10.93:334,11,0	0/1:9,0:9:68.50:68,0,117	0/0:5,0:5:15.03:0,15,226	0/0:4,0:4:12.02:0,12,121	0/0:1,0:1:3.01:0,3,30	0/0:3,0:3:8.86:0,9,91	1/1:3,0:3:3.01:33,3,0	1/1:1,0:1:3.01:62,3,0	0/1:9,0:9:54.53:69,0,55	1/1:0,4:4:12.01:159,12,0	1/1:9,0:9:6.02:66,6,0	1/1:2,0:2:6.02:66,6,0
chr10	18269989	.	TTA	T	1670.16	PASS	AB=0.857;AC=42;AF=0.875;AN=48;BaseQRankSum=-0.261;DP=180;FS=1.468;HRun=0;HaplotypeScore=50.9967;InbreedingCoeff=0.1309;MQ=53.01;MQ0=4;MQRankSum=0.087;QD=10.85;ReadPosRankSum=2.918;VQSLOD=3.1909;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:16,0:16:13.52:62,0,14	./.	./.	0/0:15,0:1:3.01:0,3,36	1/1:13,1:14:23.18:136,23,0	1/1:3,0:3:8.68:84,9,0	./.	1/1:24,6:30:28.65:615,29,0	0/0:3,0:3:0.90:0,1,2	1/1:5,0:5:5.95:22,6,0	1/1:3,0:3:5.68:28,6,0	./.	1/1:7,0:7:5.68:28,6,0	1/1:2,0:2:1.55:4,2,0	1/1:1,2:3:6.02:70,6,0	1/1:3,1:4:8.59:60,9,0	1/1:17,1:17:16.82:120,17,0	0/1:6,4:10:52.41:85,0,52	1/1:4,0:4:2.59:16,3,0	1/1:4,0:4:8.10:34,8,0	1/1:1,0:1:2.50:9,2,0	1/1:2,0:2:3:25,3,0	1/1:3,0:3:2.84:14,3,0	1/1:1,0:1:3:26,3,0	1/1:4,5:9:22.57:244,23,0	1/1:4,0:4:5.91:39,6,0	1/1:9,0:9:5.59:28,6,0	1/1:2,0:2:5.68:28,6,0
chr10	18269996	.	ATTAT	A	978.85	PASS	AB=0.957;AC=25;AF=0.521;AN=48;BaseQRankSum=4.012;DP=193;FS=5.406;HRun=0;HaplotypeScore=63.8912;InbreedingCoeff=-0.0021;MQ=44.97;MQ0=3;MQRankSum=-0.269;QD=7.30;ReadPosRankSum=4.368;VQSLOD=1.1187;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:17,0:17:35.63:36,0,173	0/0:2,0:2:6.02:0,6,147	./.	./.	0/1:16,0:16:76.36:76,0,243	1/1:2,0:2:5.23:61,5,0	0/0:1,0:1:3.01:0,3,36	0/1:23,0:29:99:100,0,223	0/1:4,0:4:5.76:6,0,52	0/1:7,0:7:10.83:11,0,182	0/1:4,0:4:35.92:37,0,36	./.	0/1:9,0:9:33.65:34,0,78	0/0:4,0:4:6.02:0,6,90	1/1:1,2:3:8.86:118,9,0	1/1:2,1:3:7.98:69,8,0	0/0:25,0:25:28.46:0,28,783	0/1:8,3:11:26.64:151,0,27	0/0:4,0:4:0.13:0,0,155	1/1:3,0:3:6.81:21,7,0	1/1:1,0:1:1.82:5,2,0	./.	1/1:3,0:3:2.99:23,3,0	0/0:1,0:1:3.01:0,3,30	1/1:3,5:8:16.26:306,16,0	0/0:2,0:2:5.93:0,6,50	0/1:12,0:12:30.80:31,0,141	1/1:2,0:2:5.98:46,6,0
chr10	18269997	.	T	TTA	651.55	PASS	AB=0.930;AC=5;AF=0.104;AN=48;BaseQRankSum=-2.409;DP=197;FS=1.807;HRun=0;HaplotypeScore=61.3067;InbreedingCoeff=0.0397;MQ=45.47;MQ0=3;MQRankSum=-0.533;QD=11.85;ReadPosRankSum=-2.619;VQSLOD=2.9018;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:16,0:16:65.67:66,0,84	0/0:2,0:2:6:0,6,64	./.	./.	0/0:16,0:16:32.70:0,33,332	0/0:3,0:3:6.51:0,7,29	1/1:0,1:1:3.01:55,3,0	0/1:25,8:34:99:599,0,101	0/1:4,0:4:28.64:37,0,29	0/0:7,0:7:11.95:0,12,136	0/0:5,0:5:8.85:0,9,59	./.	0/0:9,0:9:11.87:0,12,108	0/0:3,0:3:6.01:0,6,65	0/0:3,0:3:4.52:0,5,13	0/0:2,0:2:4.78:0,5,18	0/0:25,0:25:45.01:0,45,564	0/0:11,0:11:9.87:0,10,67	0/0:4,0:4:11.63:0,12,129	0/0:2,0:2:5.62:0,6,28	0/0:1,0:1:2.92:0,3,17	./.	0/0:3,0:3:2.92:0,3,17	0/0:1,0:1:2.50:0,2,9	0/0:9,0:9:17.13:0,17,59	0/0:2,0:2:6.01:0,6,69	0/0:12,0:12:14.88:0,15,145	0/0:2,0:2:5.85:0,6,33
chr10	18269999	.	AT	A	736.73	PASS	AB=0.772;AC=13;AF=0.271;AN=48;BaseQRankSum=5.735;DP=200;FS=3.762;HRun=2;HaplotypeScore=57.0089;InbreedingCoeff=0.1929;MQ=45.88;MQ0=3;MQRankSum=-5.795;QD=13.64;ReadPosRankSum=4.267;VQSLOD=3.0247;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:7,5:16:71.10:71,0,103	0/0:2,0:2:6.02:0,6,90	./.	./.	0/0:17,0:17:15.42:0,15,252	0/1:3,0:3:5.86:73,0,6	0/0:1,0:1:1.55:0,2,4	0/0:35,0:35:84.25:0,84,511	0/1:1,3:4:32.88:37,0,33	0/0:7,0:7:8.02:0,8,129	0/0:5,0:5:4.02:0,4,78	./.	0/0:9,0:9:4.04:0,4,78	0/0:2,0:2:6.02:0,6,82	1/1:2,1:3:9.03:110,9,0	0/1:3,0:3:9.40:64,0,9	0/0:25,0:25:45.38:0,45,656	0/1:5,6:11:17.24:273,0,17	0/0:4,0:4:11.93:0,12,148	0/0:2,0:2:5.85:0,6,36	0/0:1,0:1:2.99:0,3,23	./.	1/1:3,0:3:0.89:2,1,0	0/0:1,0:1:2.80:0,3,13	1/1:9,0:9:10.11:236,10,0	0/0:2,0:2:6.02:0,6,72	0/0:13,0:13:9.80:0,10,147	1/1:2,0:2:1.77:4,2,0
chr10	18270009	.	T	TTA	181.83	PASS	AC=4;AF=0.095;AN=42;BaseQRankSum=-1.199;DP=194;FS=8.609;HRun=0;HaplotypeScore=66.6431;InbreedingCoeff=0.4744;MQ=45.40;MQ0=3;MQRankSum=-3.008;QD=11.36;ReadPosRankSum=1.751;VQSLOD=2.5738;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,5:13:12.71:243,13,0	0/0:2,0:2:6:0,6,64	./.	./.	0/0:18,0:18:39.13:0,39,507	0/0:3,0:3:9.03:0,9,128	0/0:1,0:1:3:0,3,29	0/0:37,0:37:99:0,101,1088	1/1:2,1:3:0.81:35,1,0	0/0:6,0:6:15.05:0,15,199	0/0:4,0:4:12.04:0,12,153	./.	0/0:7,0:7:12.04:0,12,153	0/0:4,0:4:12.01:0,12,131	0/0:3,0:3:9:0,9,89	0/0:4,0:4:9:0,9,104	0/0:28,0:28:60.16:0,60,754	0/0:12,0:12:32.96:0,33,403	0/0:5,0:5:12.04:0,12,170	./.	./.	./.	0/0:1,0:1:3.01:0,3,36	./.	0/0:8,0:8:23.97:0,24,244	0/0:1,0:1:3:0,3,26	0/0:12,0:12:21.07:0,21,275	0/0:2,0:2:6.02:0,6,72
chr10	18272352	.	T	TCA	668.65	PASS	AB=0.983;AC=31;AF=0.554;AN=56;BaseQRankSum=-0.636;DP=443;FS=2.188;HRun=0;HaplotypeScore=103.7229;InbreedingCoeff=-0.0803;MQ=67.92;MQ0=16;MQRankSum=3.315;QD=1.79;ReadPosRankSum=0.221;VQSLOD=1.4698;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:20:9.37:14,0,9	0/1:3,0:3:0.16:0,0,0	0/1:46,0:22:14.74:15,0,146	0/1:47,0:24:13.15:13,0,69	0/0:9,0:8:5.64:0,6,27	0/1:15,0:15:13.18:22,0,13	0/1:12,5:17:0.48:39,0,0	1/1:12,0:10:3.47:29,3,0	1/1:8,0:8:6.45:48,6,0	0/1:18,0:18:53.51:79,0,54	0/1:10,0:10:7.62:107,0,8	0/1:15,0:14:19.81:91,0,20	0/1:14,0:14:8.75:9,0,57	0/0:14,0:13:2.80:0,3,13	1/1:13,0:13:3.01:30,3,0	0/1:12,0:12:10.28:71,0,10	0/1:15,0:14:4.71:5,0,34	1/1:9,0:9:5.95:55,6,0	1/1:15,0:13:3.44:20,3,0	0/1:18,0:16:21.30:21,0,25	1/1:20,0:15:2.24:6,2,0	1/1:12,1:13:3:27,3,0	0/0:8,0:8:2.68:0,3,11	1/1:15,0:14:4.54:28,5,0	1/1:17,0:17:9:87,9,0	0/0:10,0:10:1.67:0,2,3	0/0:16,0:16:2.80:0,3,14	0/0:12,0:11:11.45:0,11,64
chr10	18272357	.	CACACACACACACACACAT	C	1626.48	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=-7.237;DP=454;FS=0.000;HRun=0;HaplotypeScore=184.2628;InbreedingCoeff=-0.0373;MQ=60.47;MQ0=21;MQRankSum=1.815;QD=5.20;ReadPosRankSum=-0.886;VQSLOD=2.2708;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:18:16.37:74,0,16	0/0:3,0:3:3.48:0,3,44	0/1:43,0:19:47.83:48,0,94	0/1:44,0:21:36.56:37,0,151	0/1:9,0:8:8.93:9,0,306	0/1:19,0:19:33.26:33,0,351	0/0:18,0:18:25.43:0,25,772	0/1:13,0:10:47.85:115,0,48	1/1:8,0:8:8.98:73,9,0	0/0:18,0:18:16.23:0,16,2009	0/0:9,0:9:24.54:0,25,912	0/0:14,0:13:18.53:0,19,845	0/1:16,0:15:18.92:19,0,655	0/0:14,0:13:2.95:0,3,144	0/1:15,0:15:3.94:4,0,578	0/1:13,0:13:42.07:42,0,750	0/0:22,0:21:31.35:0,31,945	0/1:11,0:10:19.88:20,0,853	1/1:14,0:12:18.04:335,18,0	1/1:4,13:15:20.94:738,21,0	1/1:21,0:15:14.97:157,15,0	0/0:11,0:11:12.51:0,13,338	0/0:9,0:9:2.69:0,3,139	0/1:16,0:15:12.88:63,0,13	0/0:13,0:13:10.75:0,11,516	0/1:13,0:13:23.87:24,0,496	0/1:19,0:19:8.96:9,0,440	0/0:10,0:9:15.05:0,15,504
chr10	18272369	.	CACACAT	C	2293.75	PASS	AB=0.997;AC=37;AF=0.661;AN=56;BaseQRankSum=-6.827;DP=448;FS=3.849;HRun=0;HaplotypeScore=114.4346;InbreedingCoeff=-0.3838;MQ=50.70;MQ0=22;MQRankSum=1.014;QD=5.27;ReadPosRankSum=-5.289;VQSLOD=0.0443;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:24:14.05:105,14,0	1/1:4,0:4:2.65:21,3,0	0/1:36,0:13:47.92:48,0,55	0/1:39,0:16:14.64:43,0,15	1/1:10,1:10:14.45:102,14,0	0/1:19,0:19:33:33,0,141	0/1:21,0:21:99:136,0,124	0/1:13,0:10:5.18:172,0,5	1/1:8,0:8:11.98:97,12,0	0/1:22,0:21:98.70:99,0,536	0/1:10,0:10:24.10:24,0,237	0/1:13,0:11:24.88:25,0,294	0/1:16,1:16:0.94:212,0,1	1/1:12,0:11:2.50:12,2,0	0/1:13,0:13:75.83:76,0,166	0/1:12,0:12:65.75:66,0,230	0/1:24,0:23:16.78:148,0,17	0/1:11,0:10:45.35:45,0,178	0/1:12,0:10:51.03:62,0,51	1/1:17,0:15:0.19:184,0,0	0/1:20,0:14:8.08:77,0,8	0/1:9,0:9:15.49:15,0,75	0/1:9,0:9:14.38:14,0,19	1/1:16,0:15:17.64:145,18,0	0/0:13,0:13:10.57:0,11,156	1/1:13,0:13:7.76:168,8,0	1/1:16,2:18:14.29:203,14,0	1/1:7,1:7:12.15:118,12,0
chr10	18272373	.	CAT	C	3587.32	PASS	AB=0.993;AC=46;AF=0.821;AN=56;BaseQRankSum=-6.666;DP=454;FS=4.865;HRun=0;HaplotypeScore=93.3128;InbreedingCoeff=-0.2255;MQ=48.13;MQ0=26;MQRankSum=1.341;QD=7.90;ReadPosRankSum=-5.535;VQSLOD=1.7756;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:25:13.29:103,13,0	1/1:2,1:3:2.82:24,3,0	0/1:32,0:10:47.92:48,0,55	0/1:34,0:11:12.39:48,0,12	1/1:12,1:12:15:150,15,0	0/1:19,0:19:14.06:37,0,14	1/1:19,0:19:23.19:219,23,0	1/1:18,0:15:33.06:285,33,0	1/1:6,0:6:14.97:121,15,0	0/1:23,1:23:29.15:239,0,29	0/1:11,0:11:8.88:97,0,9	0/1:13,0:11:29.09:29,0,49	1/1:15,2:16:35.71:326,36,0	1/1:9,2:10:2.99:24,3,0	0/1:12,0:12:7.90:80,0,8	0/1:12,0:12:10.30:117,0,10	1/1:21,3:23:25.60:274,26,0	0/1:12,0:11:9.10:109,0,9	1/1:14,0:9:7.69:90,8,0	1/1:16,0:14:20.34:117,20,0	1/1:22,0:16:19.08:145,19,0	1/1:9,0:9:5.87:67,6,0	1/1:0,10:10:5.98:66,6,0	1/1:17,1:17:23.87:192,24,0	0/1:15,0:14:11.46:11,0,14	1/1:13,0:12:32.81:250,33,0	1/1:15,3:18:23.76:180,24,0	1/1:8,1:8:14.94:140,15,0
chr10	18272404	.	A	ACC	1453.12	PASS	AB=0.938;AC=16;AF=0.286;AN=56;BaseQRankSum=-1.614;DP=492;FS=0.523;HRun=4;HaplotypeScore=112.8780;InbreedingCoeff=0.7177;MQ=54.77;MQ0=25;MQRankSum=1.329;QD=10.45;ReadPosRankSum=-0.704;VQSLOD=-0.2698;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:23:3.28:0,3,18	0/0:5,0:6:11.17:0,11,65	0/0:20,0:10:17.21:0,17,210	0/0:19,0:14:30.75:0,31,287	0/0:19,0:17:5.50:0,5,27	1/1:2,20:22:4.26:57,4,0	1/1:17,0:17:35.01:277,35,0	0/0:28,0:25:54.71:0,55,464	0/0:9,0:9:23.30:0,23,133	0/0:28,0:25:42.79:0,43,296	0/1:14,0:14:12.59:13,0,103	1/1:14,0:13:26.74:236,27,0	0/0:17,0:16:25.53:0,26,168	0/0:12,0:11:11.81:0,12,83	1/1:4,0:18:10.68:91,11,0	1/1:12,0:12:27.77:224,28,0	0/0:27,0:25:16:0,16,77	0/1:12,1:13:30.67:234,0,31	0/0:22,0:15:29.72:0,30,226	0/0:14,0:14:19.16:0,19,158	0/0:24,0:21:25.26:0,25,206	1/1:10,0:10:21.01:212,21,0	0/0:11,0:9:8.80:0,9,58	0/0:10,0:10:14.55:0,15,89	1/1:15,1:17:31.47:301,31,0	0/0:19,0:16:38.14:0,38,230	0/0:20,0:20:14.37:0,14,81	0/0:17,0:17:11.72:0,12,65
chr10	18272407	.	CCA	C	2541.69	PASS	AB=0.733;AC=25;AF=0.446;AN=56;BaseQRankSum=1.377;DP=489;FS=1.612;HRun=0;HaplotypeScore=101.7976;InbreedingCoeff=0.7518;MQ=55.74;MQ0=21;MQRankSum=2.321;QD=10.55;ReadPosRankSum=0.691;VQSLOD=3.3300;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,19:23:14.18:114,14,0	1/1:6,0:6:11.86:141,12,0	0/0:26,0:13:22.86:0,23,348	0/0:22,0:15:31.09:0,31,487	1/1:5,15:18:32.65:227,33,0	0/0:21,0:21:2.86:0,3,29	0/0:16,0:16:32.93:0,33,442	0/0:25,0:23:57.17:0,57,828	1/1:9,0:9:24.06:285,24,0	0/1:16,12:25:6.95:369,0,7	1/1:17,0:17:24.75:236,25,0	0/0:14,0:13:23.90:0,24,279	1/1:14,3:16:25.39:287,25,0	0/1:11,1:11:6.27:119,0,6	0/0:18,0:18:8.66:0,9,100	0/0:12,0:12:18.06:0,18,285	0/1:7,20:25:5.44:85,0,5	0/0:13,0:12:32.44:0,32,391	0/0:16,0:12:33.05:0,33,451	0/0:14,0:14:21.45:0,21,247	0/0:24,0:21:51.10:0,51,717	0/0:11,0:11:24.06:0,24,341	1/1:9,0:8:5.75:60,6,0	1/1:10,1:10:16.71:190,17,0	0/0:15,0:16:27.07:0,27,386	1/1:6,13:16:24.01:390,24,0	1/1:5,16:21:8.44:140,8,0	1/1:6,13:18:11.92:110,12,0
chr10	18272581	.	T	TTAATAACTTACAC	40455.69	PASS	AB=0.962;AC=29;AF=0.518;AN=56;BaseQRankSum=-3.900;DP=591;FS=5.399;HRun=0;HaplotypeScore=184.7672;InbreedingCoeff=0.9250;MQ=75.35;MQ0=0;MQRankSum=-18.205;QD=126.42;ReadPosRankSum=-2.622;VQSLOD=3.7011;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,8:18:33.11:1846,33,0	0/0:6,0:6:18.06:0,18,726	0/0:19,0:19:41.88:0,42,1253	0/0:15,0:15:42.14:0,42,1244	0/0:29,0:29:78.27:0,78,3121	1/1:10,7:20:42.14:2051,42,0	1/1:9,8:20:48.16:2620,48,0	1/1:25,4:31:80.93:4119,81,0	1/1:6,10:22:48.16:2909,48,0	0/0:22,0:22:66.23:0,66,2468	0/0:23,0:23:66.21:0,66,2566	1/1:7,18:28:72.25:4269,72,0	0/0:31,0:31:90.31:0,90,3331	0/0:13,0:13:33.11:0,33,1317	1/1:8,12:25:60.21:3518,60,0	1/1:12,9:21:63.22:3652,63,0	0/0:20,0:20:60.21:0,60,2335	1/1:6,5:11:30.10:1820,30,0	1/1:11,3:14:36.12:2139,36,0	1/1:10,15:31:81.23:4153,81,0	1/1:7,1:9:15.05:838,15,0	1/1:8,13:21:57.20:3191,57,0	0/0:24,0:24:69.24:0,69,2694	0/1:24,1:25:99:123,0,2554	1/1:9,10:23:54.19:3207,54,0	0/0:23,0:23:69.23:0,69,2662	0/0:29,0:29:84.26:0,84,3045	0/0:17,0:17:51.18:0,51,2012
chr10	18273578	.	CCACACACACACACA	C	1382.65	PASS	AB=1.000;AC=18;AF=0.375;AN=48;BaseQRankSum=3.603;DP=407;FS=6.406;HRun=0;HaplotypeScore=136.0734;InbreedingCoeff=0.6254;MQ=71.72;MQ0=12;MQRankSum=-3.380;QD=12.80;ReadPosRankSum=1.942;VQSLOD=1.9907;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:19:6.02:195,6,0	./.	0/0:32,0:24:6.02:0,6,142	0/0:27,0:22:13.60:0,14,437	1/1:6,0:5:3:25,3,0	0/0:21,0:21:23.87:0,24,1017	0/0:24,0:25:27.09:0,27,1284	0/0:16,0:15:21.06:0,21,531	1/1:2,2:4:3.01:118,3,0	./.	./.	0/0:13,0:13:9.02:0,9,297	1/1:5,6:11:12.04:473,12,0	1/1:13,0:11:12:159,12,0	0/0:12,0:12:9.98:0,10,495	0/0:19,0:20:27.09:0,27,1324	1/1:8,1:8:3.01:118,3,0	0/0:12,0:18:18.06:0,18,780	0/0:6,0:6:9.03:0,9,248	0/0:16,0:15:2.82:0,3,50	0/0:39,0:30:9.96:0,10,393	0/0:10,0:11:9.03:0,9,338	0/1:4,0:4:0:0,0,0	0/1:11,0:10:19.98:20,0,42	0/0:19,0:19:18.06:0,18,819	1/1:11,6:14:14.40:317,14,0	1/1:10,0:10:3.01:118,3,0	./.
chr10	18273647	.	C	CCA	1828.62	PASS	AB=0.797;AC=31;AF=0.646;AN=48;BaseQRankSum=-4.212;DP=226;FS=7.587;HRun=0;HaplotypeScore=43.8971;InbreedingCoeff=0.2595;MQ=56.66;MQ0=7;MQRankSum=2.554;QD=12.97;ReadPosRankSum=4.920;VQSLOD=2.0379;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,2:6:3.01:49,3,0	1/1:1,1:2:6.02:98,6,0	0/0:33,0:14:6.70:0,7,114	0/0:25,0:11:10.82:0,11,93	0/0:3,0:3:2.97:0,3,20	1/1:6,3:8:9.03:138,9,0	1/1:3,9:13:23.84:300,24,0	1/1:10,2:8:12.03:172,12,0	0/1:3,2:4:5.19:90,0,5	0/0:6,0:5:8.85:0,9,76	./.	1/1:3,1:3:2.91:49,3,0	0/1:6,2:7:7.29:135,0,7	0/0:3,0:2:2.84:0,3,14	1/1:2,1:3:0.47:1,0,0	1/1:2,2:3:6.02:87,6,0	0/1:2,7:11:37.44:133,0,37	1/1:2,3:5:14.81:184,15,0	./.	1/1:2,0:2:3:25,3,0	0/1:30,6:26:24.29:325,0,24	./.	1/1:0,2:2:3.01:50,3,0	1/1:3,4:7:3.01:49,3,0	0/1:6,0:6:2.06:41,0,2	0/0:7,0:7:5.84:0,6,39	./.	1/1:0,1:1:3.01:50,3,0
chr10	18273665	.	C	CCA	434.51	PASS	AB=0.860;AC=7;AF=0.152;AN=46;BaseQRankSum=-1.253;DP=298;FS=11.798;HRun=0;HaplotypeScore=54.1298;InbreedingCoeff=0.1667;MQ=43.61;MQ0=26;MQRankSum=0.785;QD=4.67;ReadPosRankSum=-1.005;VQSLOD=0.6949;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:7:0:0,0,0	0/0:3,0:2:5.60:0,6,37	0/1:46,0:7:22.58:23,0,31	0/0:38,0:9:5.69:0,6,57	0/0:4,0:4:3:0,3,25	0/0:7,0:5:6.02:0,6,72	0/1:14,1:16:87.87:98,0,88	0/1:11,9:14:44.15:281,0,44	0/0:7,0:4:11.68:0,12,108	0/0:6,0:5:1.64:0,2,68	./.	0/0:5,0:3:0:0,0,0	0/0:7,0:5:6.02:0,6,68	0/0:7,0:4:3:0,3,38	0/0:5,2:6:0.29:0,0,1	0/0:5,0:4:6:0,6,52	0/0:10,0:10:12.50:0,13,142	1/1:7,1:8:10.23:98,10,0	1/1:2,1:3:2.37:49,2,0	./.	0/0:49,2:30:14.30:0,14,107	./.	0/0:5,0:4:3:0,3,25	./.	0/0:8,0:7:6.54:0,7,47	0/0:8,0:7:12.04:0,12,149	0/0:2,0:2:3.01:0,3,37	./.
chr10	18273677	.	ACCTC	A	39.24	PASS	AB=0.917;AC=10;AF=0.200;AN=50;BaseQRankSum=3.316;DP=299;FS=3.111;HRun=0;HaplotypeScore=49.7519;InbreedingCoeff=0.0076;MQ=39.74;MQ0=34;MQRankSum=-0.062;QD=0.67;ReadPosRankSum=-3.168;VQSLOD=0.1851;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:7:0:0,0,0	0/0:3,0:2:6.02:0,6,112	0/0:46,0:4:0.88:0,1,43	0/0:36,1:4:8.81:0,9,82	0/0:5,0:4:3:0,3,26	0/0:7,0:4:6.02:0,6,119	0/1:13,2:16:69.45:69,0,281	0/0:24,0:15:39.13:0,39,759	0/1:7,0:4:8:8,0,184	0/0:5,0:3:6.02:0,6,125	./.	0/1:6,0:3:0.16:0,0,0	0/0:4,0:2:6.02:0,6,90	0/0:5,0:3:3.48:0,3,58	1/1:7,1:6:0.23:0,0,0	0/0:8,0:7:11.98:0,12,236	0/0:7,0:7:12.04:0,12,208	0/1:6,2:8:28.87:29,0,162	0/1:7,0:4:2.72:3,0,137	0/0:4,0:4:3.01:0,3,80	0/0:51,1:27:15.71:0,16,189	./.	0/0:5,0:3:2.81:0,3,73	./.	0/1:5,1:5:21:21,0,78	0/0:8,0:7:2.22:0,2,220	0/0:2,0:2:3.01:0,3,42	1/1:1,0:1:2.88:15,3,0
chr10	18273681	.	CCA	C	179.82	PASS	AB=1.000;AC=18;AF=0.429;AN=42;BaseQRankSum=-1.165;DP=287;FS=5.602;HRun=0;HaplotypeScore=42.7812;InbreedingCoeff=0.2115;MQ=39.88;MQ0=37;MQRankSum=0.407;QD=1.63;ReadPosRankSum=1.735;VQSLOD=0.4393;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:45,0:4:3.50:0,4,13	0/0:34,0:3:3.01:0,3,31	./.	1/1:8,0:4:0.47:1,0,0	0/0:13,0:13:14.23:0,14,183	0/0:24,0:15:30.09:0,30,459	0/1:6,0:3:5.64:6,0,18	1/1:5,1:3:3.01:37,3,0	./.	0/0:5,0:2:0:0,0,0	1/1:3,1:2:3.01:37,3,0	1/1:5,0:3:2.99:26,3,0	0/0:7,0:5:0.09:0,0,1	0/1:8,0:7:27.81:28,0,67	1/1:4,2:6:6.02:71,6,0	0/1:7,0:7:8.90:9,0,54	0/0:7,0:4:11.99:0,12,125	0/0:5,0:5:3.48:0,3,50	0/1:52,0:27:15.21:15,0,81	./.	./.	./.	0/0:6,0:6:3.48:0,3,50	1/1:6,0:5:3.01:35,3,0	1/1:1,1:2:3.01:37,3,0	0/0:1,0:1:1.55:0,2,4
chr10	18273697	.	ACCCCTC	A	157.71	PASS	AB=0.937;AC=12;AF=0.250;AN=48;BaseQRankSum=3.263;DP=239;FS=3.741;HRun=0;HaplotypeScore=41.8323;InbreedingCoeff=-0.0306;MQ=37.99;MQ0=26;MQRankSum=-0.950;QD=2.02;ReadPosRankSum=1.006;VQSLOD=1.1719;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/1:23,0:3:9.67:29,0,10	0/0:27,1:2:1.82:0,2,5	./.	0/0:6,1:4:4.56:0,5,40	0/1:10,0:9:9.13:9,0,285	0/0:18,0:12:30.55:0,31,781	1/1:2,0:1:3.01:47,3,0	0/0:3,0:1:3.01:0,3,69	./.	0/0:7,0:5:5.07:0,5,55	0/0:2,0:1:3.01:0,3,56	0/0:4,0:2:3.88:0,4,26	0/0:8,0:5:5.24:0,5,31	0/1:9,0:8:9.81:10,0,256	0/0:5,0:5:12.03:0,12,137	0/1:6,0:6:58.79:59,0,156	0/1:8,0:4:23.89:24,0,90	0/0:4,0:4:2.67:0,3,75	0/0:45,1:27:9.94:0,10,199	0/1:4,0:2:0:0,0,0	0/0:5,0:3:0.47:0,0,1	0/0:3,0:2:1.25:0,1,3	0/1:5,1:6:3.99:4,0,81	0/1:3,1:3:20.81:21,0,52	0/0:1,0:1:3.01:0,3,65	1/1:1,1:1:3.01:74,3,0
chr10	18273700	.	CCT	C	105.96	PASS	AB=0.927;AC=14;AF=0.318;AN=44;BaseQRankSum=3.230;DP=216;FS=0.000;HRun=0;HaplotypeScore=36.0175;InbreedingCoeff=0.1976;MQ=35.30;MQ0=22;MQRankSum=-1.942;QD=1.22;ReadPosRankSum=1.999;VQSLOD=1.1860;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	0/0:2,0:1:0.47:0,0,1	0/0:18,0:3:0.59:0,1,7	./.	./.	1/1:8,0:4:2.98:25,3,0	0/0:11,0:9:11.66:0,12,165	0/0:17,0:11:27.40:0,27,367	1/1:3,0:1:2.74:12,3,0	0/0:3,0:1:2.97:0,3,20	./.	1/1:7,0:5:4.85:18,5,0	0/0:2,0:1:0.47:0,0,1	./.	1/1:7,0:4:2.92:10,3,0	0/0:9,0:8:11.45:0,11,152	0/0:5,0:5:2.16:0,2,34	0/1:4,2:6:22.52:121,0,23	0/1:5,0:2:3.70:4,0,45	0/0:4,0:4:3.01:0,3,51	0/1:43,2:24:12.76:13,0,66	./.	0/0:4,0:3:0.63:0,1,1	0/0:3,0:2:1.25:0,1,3	0/0:5,1:6:4.56:0,5,12	0/1:4,0:3:5.24:5,0,37	0/0:1,0:1:2.60:0,3,10	1/1:2,0:1:2.88:15,3,0
chr10	18273954	.	ACCCCTC	A	174.55	PASS	AB=0.869;AC=11;AF=0.324;AN=34;BaseQRankSum=-1.377;DP=97;FS=0.000;HRun=0;HaplotypeScore=39.5382;InbreedingCoeff=0.2503;MQ=21.49;MQ0=30;MQRankSum=-1.466;QD=4.26;ReadPosRankSum=1.821;VQSLOD=0.8752;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:3:4.76:0,5,28	0/0:6,0:6:1.70:0,2,6	./.	./.	0/0:1,0:1:0:0,0,0	./.	./.	./.	0/0:1,1:1:2.98:0,3,22	1/1:3,3:4:6.02:148,6,0	0/0:3,0:3:0.25:0,0,0	./.	./.	0/0:5,0:3:1.93:0,2,41	./.	./.	./.	0/0:4,0:2:1.01:0,1,37	1/1:4,0:1:2.22:7,2,0	1/1:10,0:8:3.01:40,3,0	1/1:5,1:1:0.47:1,0,0	0/0:3,0:2:1.25:0,1,3	0/1:2,1:1:0:0,0,0	0/1:5,0:4:0.05:0,0,0	0/0:11,0:10:0.57:0,1,2	0/1:5,1:4:23.22:65,0,23	0/0:1,0:1:0:0,0,0	./.
chr10	18274036	.	C	CA	31.90	PASS	AB=0.933;AC=11;AF=0.239;AN=46;BaseQRankSum=3.332;DP=225;FS=0.000;HRun=0;HaplotypeScore=85.0853;InbreedingCoeff=0.2467;MQ=23.23;MQ0=53;MQRankSum=0.583;QD=0.86;ReadPosRankSum=-1.748;VQSLOD=1.3644;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:11,0:9:6.65:7,0,44	0/0:1,0:1:2.04:0,2,6	./.	./.	1/1:3,0:3:2.04:6,2,0	0/1:3,1:4:7.48:51,0,7	0/0:6,0:4:2.03:0,2,6	0/0:6,0:3:9.03:0,9,112	0/0:6,0:5:3.44:0,3,21	0/0:4,0:2:3.01:0,3,39	0/1:6,0:6:0.04:1,0,0	1/1:3,0:2:1.82:6,2,0	0/0:7,0:4:6.33:0,6,59	0/0:13,0:10:0.04:0,0,3	0/0:1,0:1:3.01:0,3,41	1/1:3,0:3:5.69:48,6,0	1/1:7,0:6:5.24:21,5,0	./.	0/0:2,0:1:3.01:0,3,33	0/0:25,0:24:8.64:0,9,155	./.	0/0:17,0:16:0.06:0,0,12	0/0:3,0:2:0:0,0,0	0/0:15,0:13:5.20:0,5,74	0/0:18,4:22:12.39:0,12,125	0/0:8,0:6:1.93:0,2,75	./.	0/0:4,0:3:3.34:0,3,30
chr10	18274050	.	ACACC	A	46.31	PASS	AB=0.960;AC=15;AF=0.326;AN=46;BaseQRankSum=0.126;DP=193;FS=0.000;HRun=0;HaplotypeScore=63.7921;InbreedingCoeff=0.0693;MQ=23.44;MQ0=47;MQRankSum=1.181;QD=0.80;ReadPosRankSum=-1.982;VQSLOD=0.5199;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:6:3.01:0,3,54	0/0:1,0:1:2.90:0,3,16	./.	./.	1/1:2,0:2:2.80:13,3,0	0/1:3,0:3:16.77:39,0,17	0/0:5,1:4:2.97:0,3,20	0/1:5,0:3:4.81:5,0,113	./.	0/0:4,0:3:2.92:0,3,17	1/1:4,1:5:3.68:17,4,0	0/0:3,0:3:3.22:0,3,36	0/0:4,0:2:6.02:0,6,84	1/1:7,0:6:1.47:7,1,0	0/0:3,0:3:2.93:0,3,21	0/1:2,0:2:12.79:15,0,13	1/1:5,0:5:3.44:21,3,0	0/0:2,0:1:0:0,0,0	0/0:4,0:1:3.01:0,3,45	0/0:28,0:24:2.91:0,3,110	./.	1/1:18,0:17:0.72:2,1,0	0/0:2,0:2:0.47:0,0,1	0/0:9,1:10:2.74:0,3,67	0/0:20,0:20:12.42:0,12,93	0/1:7,0:5:17.97:18,0,68	./.	0/1:3,1:3:8.92:26,0,9
chr10	18274052	.	ACCCCTC	A	254.91	PASS	AB=0.949;AC=18;AF=0.391;AN=46;BaseQRankSum=2.142;DP=188;FS=0.000;HRun=0;HaplotypeScore=63.0170;InbreedingCoeff=0.2008;MQ=23.47;MQ0=45;MQRankSum=1.135;QD=3.19;ReadPosRankSum=3.383;VQSLOD=1.2516;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:6:3.01:0,3,76	1/1:1,0:1:2.97:20,3,0	./.	./.	0/0:2,0:2:2.96:0,3,19	1/1:2,0:3:6.77:38,7,0	0/0:5,1:4:3:0,3,30	0/1:4,1:3:65.69:66,0,66	./.	0/0:3,0:2:3.01:0,3,35	0/0:4,1:5:3.91:0,4,21	0/0:4,0:3:3.42:0,3,14	0/1:4,0:2:1.43:1,0,5	0/0:7,0:6:4.82:0,5,28	0/0:3,0:3:4.21:0,4,23	1/1:2,0:2:6.02:111,6,0	1/1:4,1:5:0.92:32,1,0	1/1:1,0:1:3.01:47,3,0	0/0:4,0:1:3.01:0,3,77	0/1:26,0:23:10.54:11,0,97	./.	1/1:13,1:17:2.02:13,2,0	0/0:1,1:2:0.47:0,0,1	0/1:10,0:10:12.53:13,0,34	0/0:18,0:19:13.60:0,14,87	0/0:7,0:5:1.10:0,1,18	./.	1/1:4,0:3:5.85:34,6,0
chr10	18274058	.	CCA	C	55.22	PASS	AB=0.958;AC=18;AF=0.429;AN=42;BaseQRankSum=2.642;DP=170;FS=0.000;HRun=0;HaplotypeScore=60.2541;InbreedingCoeff=0.1817;MQ=23.79;MQ0=39;MQRankSum=-0.299;QD=0.74;ReadPosRankSum=1.723;VQSLOD=0.5299;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	1/1:1,0:1:2.60:10,3,0	./.	./.	0/1:2,0:2:0:0,0,0	1/1:3,1:4:2.69:20,3,0	0/0:6,0:4:2.96:0,3,19	0/0:6,0:2:1.55:0,2,4	./.	0/0:3,0:2:3.01:0,3,33	0/0:4,1:5:2.90:0,3,16	0/0:5,0:4:3.68:0,4,11	1/1:5,0:2:2.84:14,3,0	0/0:8,0:6:2.65:0,3,19	./.	1/1:3,0:3:7.21:30,7,0	1/1:4,0:4:2.60:10,3,0	0/0:1,0:1:0.47:0,0,1	0/0:5,0:2:3:0,3,28	0/1:21,1:20:2.79:3,0,10	./.	0/0:14,0:14:2.53:0,3,10	0/1:2,0:2:0:0,0,0	0/1:10,0:10:2.91:9,0,3	0/1:10,4:15:24.77:48,0,25	0/1:4,0:4:8.12:8,0,26	./.	1/1:3,0:3:2.79:13,3,0
chr10	18274066	.	ACACACACC	A	473.38	PASS	AB=0.917;AC=22;AF=0.550;AN=40;BaseQRankSum=0.419;DP=159;FS=0.000;HRun=0;HaplotypeScore=66.4202;InbreedingCoeff=0.2108;MQ=24.28;MQ0=32;MQRankSum=0.650;QD=5.70;ReadPosRankSum=2.353;VQSLOD=1.3687;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	1/1:0,1:1:3.01:82,3,0	./.	./.	1/1:1,2:2:3.01:57,3,0	0/1:4,0:4:0.03:0,0,45	0/0:5,0:4:2.96:0,3,19	0/0:5,0:1:2.22:0,2,7	./.	0/0:2,1:2:3.01:0,3,48	0/1:4,1:4:4.29:4,0,14	0/0:5,0:5:4.16:0,4,53	1/1:3,1:2:3.01:87,3,0	1/1:4,3:5:5.65:62,6,0	0/1:4,0:4:0.06:0,0,0	0/1:3,0:3:7.87:8,0,39	1/1:3,1:3:2.90:18,3,0	./.	0/0:5,0:3:5.99:0,6,78	0/1:20,0:19:0.52:1,0,123	./.	1/1:14,0:14:2.89:25,3,0	./.	1/1:6,2:8:2.10:84,2,0	0/0:17,0:17:6.53:0,7,44	0/1:2,2:4:3.54:90,0,4	./.	1/1:2,0:2:3.01:73,3,0
chr10	18274073	.	CCCCT	C	35.79	PASS	AB=0.933;AC=14;AF=0.368;AN=38;BaseQRankSum=1.435;DP=128;FS=0.000;HRun=0;HaplotypeScore=69.2802;InbreedingCoeff=0.2678;MQ=23.90;MQ0=28;MQRankSum=0.061;QD=0.73;ReadPosRankSum=1.395;VQSLOD=1.1305;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	1/1:1,0:1:3:27,3,0	./.	./.	0/0:3,0:2:3.01:0,3,30	0/1:4,0:3:0.02:0,0,1	./.	1/1:5,0:1:0.47:1,0,0	./.	0/0:3,0:2:2.97:0,3,20	0/0:4,0:3:0.47:0,0,1	0/0:6,0:6:7.28:0,7,61	1/1:3,0:1:0.89:2,1,0	0/0:6,0:4:0.47:0,0,2	0/0:3,1:4:1.16:0,1,3	0/0:3,0:3:5.61:0,6,53	1/1:2,0:1:2.84:14,3,0	./.	0/0:4,0:2:3.01:0,3,61	0/1:13,0:13:24:52,0,24	./.	0/1:10,2:12:0.17:0,0,0	./.	0/1:6,1:7:3.55:12,0,4	0/0:16,0:16:8.16:0,8,31	0/0:4,0:4:6.91:0,7,92	./.	1/1:1,0:1:3:28,3,0
chr10	18274086	.	ACACACACCCCTC	A	290.41	PASS	AB=0.917;AC=18;AF=0.500;AN=36;BaseQRankSum=0.886;DP=137;FS=0.000;HRun=0;HaplotypeScore=84.6298;InbreedingCoeff=0.3477;MQ=22.88;MQ0=39;MQRankSum=0.992;QD=5.01;ReadPosRankSum=1.807;VQSLOD=1.1058;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	1/1:2,0:1:3.01:36,3,0	./.	./.	0/0:4,0:3:0:0,0,0	0/1:4,1:4:32.49:99,0,32	./.	./.	./.	./.	0/0:5,0:3:0:0,0,1	0/0:7,1:6:5.44:0,5,18	0/0:4,0:2:2.68:0,3,11	1/1:5,0:4:1.77:3,2,0	1/1:3,1:4:0.47:1,0,0	1/1:5,0:4:8.73:74,9,0	0/0:2,0:1:3.01:0,3,41	./.	1/1:6,0:3:6.02:96,6,0	1/1:14,0:11:1.40:75,1,0	./.	1/1:14,0:14:1.06:9,1,0	./.	0/0:6,0:6:5.81:0,6,43	0/0:13,2:15:6.76:0,7,33	0/0:4,0:4:9:0,9,89	0/1:2,0:1:0:0,0,0	1/1:1,0:1:1.82:5,2,0
chr10	18274092	.	ACCCCTC	A	180.94	PASS	AB=0.900;AC=14;AF=0.389;AN=36;BaseQRankSum=1.156;DP=128;FS=0.000;HRun=0;HaplotypeScore=80.2415;InbreedingCoeff=0.3391;MQ=22.72;MQ0=36;MQRankSum=0.529;QD=3.62;ReadPosRankSum=0.607;VQSLOD=0.7736;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	1/1:2,0:1:3:27,3,0	./.	./.	0/0:4,0:3:2.37:0,2,8	0/1:5,0:4:32.72:37,0,33	./.	./.	./.	./.	0/0:4,0:2:0.40:0,0,1	0/0:8,0:6:5.77:0,6,40	1/1:3,0:2:2.04:6,2,0	0/0:5,0:4:0.47:0,0,1	0/1:3,1:4:0:0,0,0	0/0:4,0:3:7.92:0,8,56	0/0:1,0:1:3.01:0,3,41	./.	1/1:6,1:4:8.70:122,9,0	1/1:15,0:12:4.33:84,4,0	./.	1/1:10,2:12:0.59:10,1,0	./.	0/0:4,0:4:4.04:0,4,14	0/0:13,0:13:3.74:0,4,26	0/0:3,0:4:9:0,9,108	1/1:2,0:1:0.47:1,0,0	0/0:1,0:1:0.89:0,1,2
chr10	18274095	.	CCT	C	55.84	PASS	AB=0.876;AC=21;AF=0.583;AN=36;BaseQRankSum=1.395;DP=111;FS=0.000;HRun=0;HaplotypeScore=68.8652;InbreedingCoeff=0.2464;MQ=22.00;MQ0=37;MQRankSum=0.775;QD=1.07;ReadPosRankSum=1.147;VQSLOD=1.2355;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	1/1:2,0:1:2.94:18,3,0	./.	./.	1/1:5,0:3:0.47:1,0,0	0/1:5,0:4:13.21:13,0,27	./.	./.	./.	./.	0/1:5,0:3:0.08:0,0,0	0/0:8,0:6:5.01:0,5,51	1/1:2,1:2:3.01:34,3,0	0/1:3,2:4:0:0,0,0	0/0:3,0:3:0.47:0,0,1	0/0:4,0:3:8.61:0,9,77	1/1:2,0:1:2.98:22,3,0	./.	1/1:7,0:4:2.90:16,3,0	1/1:10,0:8:1.56:13,2,0	./.	0/0:9,0:9:4.42:0,4,13	./.	1/1:1,1:2:0.32:3,0,0	0/0:8,1:9:2.13:0,2,5	0/1:3,0:3:4.90:5,0,28	0/1:1,1:1:0:0,0,0	1/1:1,0:1:3.01:30,3,0
chr10	18274110	.	ACACCCCTC	A	405.19	PASS	AB=0.940;AC=19;AF=0.475;AN=40;BaseQRankSum=0.467;DP=133;FS=0.000;HRun=0;HaplotypeScore=66.3524;InbreedingCoeff=0.3021;MQ=22.62;MQ0=44;MQRankSum=-1.349;QD=5.19;ReadPosRankSum=1.868;VQSLOD=0.6489;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/1:2,0:1:0:0,0,0	./.	./.	0/1:6,0:4:0:0,0,0	1/1:3,1:3:5.75:90,6,0	./.	./.	./.	0/0:2,0:2:0.47:0,0,2	0/1:5,0:3:0.01:0,0,0	1/1:4,2:4:4.56:65,5,0	1/1:4,0:3:3.01:37,3,0	0/0:4,0:4:3.01:0,3,56	0/1:2,1:3:0:0,0,0	1/1:4,0:3:5.74:138,6,0	0/0:2,0:1:2.22:0,2,7	./.	0/1:9,0:6:54.84:55,0,155	1/1:9,0:8:3.03:71,3,0	0/1:9,0:2:0:0,0,0	0/0:8,0:8:5.70:0,6,68	1/1:6,0:4:0.89:2,1,0	0/0:4,0:3:3.48:0,3,33	0/1:8,2:10:2:50,0,2	0/0:5,0:5:8.70:0,9,151	0/0:2,0:1:0:0,0,0	./.
chr10	18274112	.	ACCCCTC	A	426.68	PASS	AB=0.924;AC=18;AF=0.450;AN=40;BaseQRankSum=0.047;DP=123;FS=0.000;HRun=0;HaplotypeScore=60.6397;InbreedingCoeff=0.2909;MQ=23.01;MQ0=39;MQRankSum=-0.753;QD=6.46;ReadPosRankSum=1.788;VQSLOD=1.2169;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:2,0:1:0:0,0,0	./.	./.	0/1:5,0:4:0:0,0,0	1/1:3,0:3:5.61:107,6,0	./.	./.	./.	0/0:2,0:2:0.47:0,0,2	0/0:3,0:3:0.47:0,0,1	1/1:6,1:4:4.53:79,5,0	1/1:3,0:2:3.01:37,3,0	0/0:4,0:4:6.02:0,6,118	0/1:4,0:4:0:0,0,0	0/1:2,2:3:1.48:131,0,1	0/0:2,0:1:2.94:0,3,18	./.	0/1:6,1:6:58.12:58,0,167	1/1:10,0:8:3.09:52,3,0	0/1:9,0:3:0:0,0,0	0/0:6,2:8:6.45:0,6,73	1/1:5,0:4:0.89:2,1,0	0/0:3,0:2:3.01:0,3,31	0/1:7,0:7:0.27:63,0,0	0/0:5,0:5:8.70:0,9,144	1/1:2,0:1:0.47:1,0,0	./.
chr10	18274118	.	C	CCA	481.25	PASS	AB=0.950;AC=21;AF=0.500;AN=42;BaseQRankSum=-0.557;DP=138;FS=3.900;HRun=0;HaplotypeScore=53.5340;InbreedingCoeff=-0.0000;MQ=23.24;MQ0=44;MQRankSum=2.250;QD=6.88;ReadPosRankSum=-1.342;VQSLOD=2.3219;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	./.	0/1:3,0:3:5.33:40,0,5	./.	1/1:7,0:2:1.25:3,1,0	1/1:3,0:1:3.01:37,3,0	1/1:3,0:2:6.02:85,6,0	0/0:2,0:2:0:0,0,0	0/1:7,0:4:5.34:43,0,5	1/1:5,0:3:6.02:86,6,0	0/1:5,0:5:63.48:64,0,63	0/0:4,0:4:0:0,0,0	0/0:4,0:3:3.84:0,4,13	0/1:2,0:1:0:0,0,0	1/1:1,0:1:0.47:1,0,0	0/1:5,2:6:25.78:112,0,26	1/1:7,2:8:2.72:23,3,0	0/0:9,0:5:0:0,0,0	0/1:6,1:7:27.75:45,0,28	1/1:5,0:4:2.90:17,3,0	0/0:4,0:3:0:0,0,0	0/0:5,2:7:2.01:0,2,16	0/1:6,0:6:30.42:30,0,67	0/0:1,0:1:0:0,0,0	./.
chr10	18274126	.	ACACC	A	40.08	PASS	AB=1.000;AC=19;AF=0.413;AN=46;BaseQRankSum=2.173;DP=161;FS=2.695;HRun=0;HaplotypeScore=61.2737;InbreedingCoeff=0.2374;MQ=25.45;MQ0=43;MQRankSum=-0.339;QD=0.59;ReadPosRankSum=-1.093;VQSLOD=1.0027;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:5:5.98:0,6,103	0/0:2,0:1:1.25:0,1,3	./.	./.	1/1:5,0:4:3:25,3,0	0/1:6,0:5:7.76:8,0,26	1/1:6,0:1:2.22:7,2,0	0/0:7,0:4:5.58:0,6,98	./.	0/0:4,0:3:6.02:0,6,74	0/1:2,0:2:0:0,0,0	0/0:4,1:4:1.49:0,1,57	0/1:8,0:6:13.22:13,0,47	0/0:6,0:5:6.02:0,6,167	0/0:5,0:5:2.93:0,3,20	1/1:4,1:4:5.44:30,5,0	./.	1/1:2,0:2:5.77:33,6,0	0/1:7,0:6:19.37:19,0,164	1/1:10,0:9:3.25:9,3,0	0/0:10,0:7:1.98:0,2,6	0/0:5,2:7:2.97:0,3,60	1/1:5,0:4:2.84:14,3,0	1/1:4,1:4:2.03:5,2,0	0/1:7,0:7:1.53:2,0,2	0/0:6,0:6:12.04:0,12,211	0/0:2,0:2:2.55:0,3,43	./.
chr10	18274134	.	C	CCACA	629.44	PASS	AB=0.867;AC=13;AF=0.283;AN=46;BaseQRankSum=0.729;DP=199;FS=7.908;HRun=0;HaplotypeScore=66.6337;InbreedingCoeff=-0.0126;MQ=26.67;MQ0=47;MQRankSum=-2.890;QD=6.99;ReadPosRankSum=0.809;VQSLOD=0.6596;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:5:5.69:0,6,100	./.	./.	./.	0/0:5,0:5:6.02:0,6,100	0/1:5,0:5:37.67:38,0,49	1/1:7,0:2:2.68:11,3,0	0/1:13,3:13:32.58:205,0,33	0/0:5,0:2:2.97:0,3,20	0/0:4,0:3:9.03:0,9,151	./.	0/1:4,0:4:29.13:29,0,35	0/0:9,0:6:12.04:0,12,201	0/0:7,0:6:6.01:0,6,101	0/0:4,0:5:2.96:0,3,47	1/1:3,0:4:2.49:93,2,0	0/0:4,0:2:3.01:0,3,49	0/1:1,0:2:6.87:12,0,7	0/1:12,1:10:66.94:233,0,67	1/1:10,1:10:2.74:37,3,0	0/1:11,3:10:0:0,0,0	0/0:4,0:6:3.01:0,3,51	0/0:7,0:5:4.23:0,4,28	0/0:6,0:4:3.01:0,3,50	0/1:7,0:9:49.12:96,0,49	0/0:5,0:5:14.64:0,15,211	0/0:2,0:2:2.73:0,3,50	./.
chr10	18274156	.	C	CCA	247.41	PASS	AB=0.919;AC=16;AF=0.286;AN=56;BaseQRankSum=4.879;DP=288;FS=5.409;HRun=0;HaplotypeScore=84.1773;InbreedingCoeff=-0.0163;MQ=29.55;MQ0=46;MQRankSum=-3.697;QD=2.29;ReadPosRankSum=-4.105;VQSLOD=-0.0169;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:10,3:12:69.19:69,0,213	0/0:4,0:4:3.01:0,3,35	0/0:28,0:4:8.84:0,9,75	0/0:20,0:2:3.45:0,3,22	0/0:8,0:7:9.03:0,9,113	0/1:9,0:8:13.59:21,0,14	0/0:7,0:4:3:0,3,31	0/0:19,0:17:12.51:0,13,270	0/1:4,1:4:18.97:42,0,19	0/0:10,0:7:21.06:0,21,251	0/1:4,1:4:40.40:40,0,62	1/1:5,0:4:4.94:22,5,0	0/0:11,0:9:24.08:0,24,299	0/1:10,2:10:37.32:37,0,83	1/1:5,0:5:2.83:16,3,0	0/1:6,0:5:1.03:26,0,1	0/1:5,1:4:39.99:40,0,65	0/1:6,0:5:11.25:44,0,11	0/0:15,0:10:8.36:0,8,79	0/0:7,0:6:0.43:0,0,1	0/0:22,0:14:2.12:0,2,15	0/1:8,0:8:5.23:5,0,30	0/1:12,0:9:17.20:17,0,137	0/0:14,1:13:20.78:0,21,240	1/1:16,0:16:3.11:13,3,0	0/0:7,0:7:18.94:0,19,225	0/0:2,0:2:3.01:0,3,38	0/0:5,0:4:12.04:0,12,150
chr10	18274168	.	A	ACACACC	690.35	PASS	AB=0.870;AC=15;AF=0.268;AN=56;BaseQRankSum=4.248;DP=317;FS=22.709;HRun=0;HaplotypeScore=114.5268;InbreedingCoeff=0.1499;MQ=42.27;MQ0=26;MQRankSum=-4.845;QD=5.15;ReadPosRankSum=-3.497;VQSLOD=-0.2694;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:22.92:0,23,228	0/0:5,0:5:3.43:0,3,94	0/0:27,0:6:15.02:0,15,205	0/1:24,0:7:9.43:9,0,118	0/0:8,0:7:9.03:0,9,220	0/1:5,2:7:7.75:139,0,8	0/1:5,0:4:12.98:13,0,26	0/1:24,0:23:99:170,0,400	0/0:7,0:6:6.46:0,6,91	0/0:11,0:8:15.04:0,15,357	0/0:8,0:7:14.51:0,15,202	0/0:2,1:3:2.84:0,3,14	0/0:11,0:9:27.08:0,27,573	0/0:15,0:14:5.76:0,6,159	1/1:2,1:3:1.25:3,1,0	1/1:3,1:4:4.46:125,4,0	0/0:11,0:11:16.96:0,17,215	0/1:4,2:5:8.30:212,0,8	0/1:12,0:11:17.47:105,0,17	0/0:8,0:7:0.86:0,1,2	1/1:18,0:17:5.85:35,6,0	0/1:4,4:8:13.94:14,0,58	0/0:12,0:11:16.20:0,16,323	0/0:18,0:16:20.78:0,21,450	1/1:10,5:16:0.69:9,1,0	0/0:12,0:12:26.99:0,27,490	0/0:3,0:3:6.01:0,6,99	0/0:8,0:7:21.01:0,21,365
chr10	18274205	.	T	TC	437.47	PASS	AB=0.952;AC=13;AF=0.232;AN=56;BaseQRankSum=-1.586;DP=246;FS=7.212;HRun=7;HaplotypeScore=78.5291;InbreedingCoeff=0.1059;MQ=76.98;MQ0=1;MQRankSum=0.103;QD=3.71;ReadPosRankSum=-2.034;VQSLOD=-0.7194;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,6:11:14.69:159,15,0	1/1:4,0:4:0.47:1,0,0	0/0:17,0:13:20.09:0,20,140	0/1:23,0:16:3.47:3,0,154	0/1:5,1:6:21.18:21,0,101	0/0:7,0:7:9.01:0,9,87	0/0:3,0:3:3:0,3,29	0/0:10,0:10:15.02:0,15,145	1/1:1,8:9:24.06:276,24,0	0/1:9,1:8:2.69:3,0,148	0/0:1,0:1:0:0,0,0	0/0:3,0:3:2.90:0,3,29	0/0:11,0:10:8.93:0,9,86	0/1:14,0:13:50.39:50,0,117	0/0:3,0:3:6.01:0,6,58	0/0:2,0:2:3:0,3,29	0/0:13,6:19:0.07:0,0,256	0/0:5,0:5:9.01:0,9,85	0/0:5,0:5:11.99:0,12,108	0/0:6,0:6:6:0,6,58	0/0:9,0:9:2.98:0,3,29	0/0:7,0:7:9:0,9,87	0/0:4,0:4:9.01:0,9,86	0/1:21,1:21:11.11:11,0,178	0/0:7,0:7:12:0,12,116	0/1:15,1:15:39.13:39,0,227	0/1:3,0:3:13.86:14,0,23	0/0:7,0:7:12.01:0,12,114
chr10	18274252	.	TC	T	208.46	PASS	AB=0.817;AC=15;AF=0.313;AN=48;BaseQRankSum=3.540;DP=278;FS=10.756;HRun=8;HaplotypeScore=67.3067;InbreedingCoeff=0.5428;MQ=60.85;MQ0=9;MQRankSum=-4.861;QD=3.47;ReadPosRankSum=-1.242;VQSLOD=-0.7265;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,1:17:13.22:0,13,408	0/1:5,0:5:10.56:11,0,87	0/0:30,1:16:36.10:0,36,416	0/0:26,0:10:14.22:0,14,201	0/0:7,0:7:9.02:0,9,98	1/1:1,2:3:3:28,3,0	0/1:1,6:6:0.07:0,0,0	1/1:4,4:8:10.78:92,11,0	0/0:9,0:8:14.48:0,14,127	0/0:17,0:17:41.44:0,41,538	0/0:5,0:5:6.02:0,6,72	./.	0/0:13,0:13:27.07:0,27,308	0/0:15,0:15:27.10:0,27,314	./.	1/1:0,4:4:9.01:85,9,0	0/1:19,2:21:21.82:22,0,310	./.	1/1:2,3:3:9.01:87,9,0	0/0:0,2:2:0:0,0,0	./.	1/1:2,3:5:2.74:12,3,0	0/0:9,1:10:18.52:0,19,205	0/0:26,0:24:30.03:0,30,328	1/1:2,0:2:2.96:19,3,0	0/0:16,0:15:33.06:0,33,382	0/0:8,0:8:9.02:0,9,108	0/0:3,0:3:3.01:0,3,34
chr10	18274266	.	TACACAC	T	3023.61	PASS	AB=0.833;AC=44;AF=0.880;AN=50;BaseQRankSum=-1.047;DP=295;FS=0.000;HRun=0;HaplotypeScore=74.2248;InbreedingCoeff=0.2553;MQ=52.45;MQ0=15;MQRankSum=-2.115;QD=13.09;ReadPosRankSum=0.167;VQSLOD=2.1101;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:29.96:0,30,427	1/1:3,1:4:6.02:116,6,0	1/1:28,0:12:3.22:13,3,0	./.	1/1:2,5:7:2.68:11,3,0	1/1:0,2:3:9.03:141,9,0	1/1:4,5:8:2.85:61,3,0	1/1:11,0:11:3.01:41,3,0	0/0:7,0:6:12.93:0,13,280	1/1:12,7:17:18.53:328,19,0	./.	1/1:3,1:4:3.01:62,3,0	1/1:3,7:11:18.95:371,19,0	1/1:10,2:12:8.98:131,9,0	./.	1/1:0,4:4:12.04:246,12,0	1/1:17,4:21:20.95:358,21,0	0/1:4,1:5:26.81:61,0,27	1/1:8,1:7:8.96:131,9,0	1/1:3,1:4:9.02:135,9,0	1/1:15,0:14:3.01:58,3,0	1/1:1,2:5:5.69:65,6,0	0/1:8,1:10:61.55:155,0,62	1/1:15,5:20:8.75:138,9,0	1/1:0,3:3:3.01:62,3,0	1/1:9,4:13:20.51:306,21,0	1/1:4,4:9:6.02:103,6,0	1/1:0,1:1:3.01:62,3,0
chr10	18274608	.	C	CT	13480.93	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=15.202;DP=670;FS=0.289;HRun=0;HaplotypeScore=130.4529;InbreedingCoeff=0.9984;MQ=90.86;MQ0=0;MQRankSum=-5.623;QD=41.35;ReadPosRankSum=1.800;VQSLOD=4.2567;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,40:40:99:1652,108,0	0/0:11,0:11:33.10:0,33,445	0/0:31,0:31:87.22:0,87,1132	0/0:25,0:25:62.36:0,62,892	0/0:22,0:22:60.20:0,60,822	1/1:0,30:30:81.28:1235,81,0	1/1:2,17:19:42.07:614,42,0	1/1:0,36:36:99:1649,108,0	0/0:19,0:19:54.16:0,54,722	0/0:26,0:26:78.25:0,78,1049	0/0:9,0:9:27.07:0,27,347	1/1:0,22:22:63.21:963,63,0	0/0:28,0:28:84.23:0,84,1104	0/0:16,0:16:48.14:0,48,638	1/1:2,30:32:87.30:1327,87,0	1/1:1,28:29:75.25:1147,75,0	0/0:34,0:34:99:0,102,1362	1/1:1,8:9:24.08:367,24,0	1/1:1,17:18:54.11:772,54,0	1/1:1,30:31:78.26:1150,78,0	1/1:0,20:20:60.20:917,60,0	1/1:1,20:21:57.19:870,57,0	0/0:32,0:32:93.28:0,93,1244	0/0:26,0:26:78.19:0,78,1023	1/1:1,18:19:54.18:817,54,0	0/0:29,0:29:87.26:0,87,1163	0/0:30,0:30:90.27:0,90,1221	0/0:6,0:6:18.03:0,18,211
chr10	18277402	.	TTTAC	T	1534.53	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.273;DP=815;FS=0.668;HRun=0;HaplotypeScore=128.3500;InbreedingCoeff=0.9998;MQ=86.29;MQ0=0;MQRankSum=-4.507;QD=30.69;ReadPosRankSum=0.902;VQSLOD=3.1687;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,25:27:57.12:957,57,0	0/0:11,0:11:33.10:0,33,803	0/0:36,0:36:87.26:0,87,2026	0/0:30,0:30:66.56:0,67,1499	0/0:48,0:48:99:0,138,3553	0/0:44,0:44:99:0,120,3084	0/0:31,0:31:81.28:0,81,2090	0/0:42,0:42:99:0,105,2726	1/1:5,18:23:39.13:699,39,0	0/0:34,0:33:99:0,100,2543	0/0:22,0:22:60.21:0,60,1552	0/0:27,0:27:81.28:0,81,2098	0/0:28,0:28:78.27:0,78,1952	0/0:27,0:27:75.26:0,75,1908	0/0:37,0:37:99:0,102,2630	0/0:14,0:14:42.14:0,42,1059	0/0:28,0:28:75.24:0,75,1881	0/0:19,0:19:54.19:0,54,1395	0/0:24,0:24:66.23:0,66,1685	0/0:40,0:40:99:0,99,2539	0/0:45,0:45:99:0,123,3169	0/0:22,0:22:63.22:0,63,1632	0/0:23,0:23:66.23:0,66,1701	0/0:20,0:20:54.19:0,54,1392	0/0:26,0:25:60.21:0,60,1559	0/0:31,0:31:81.28:0,81,2100	0/0:33,0:33:87.30:0,87,2232	0/0:23,0:23:66.23:0,66,1665
chr10	18277498	.	TG	T	1420.96	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.888;DP=735;FS=2.875;HRun=2;HaplotypeScore=67.8145;InbreedingCoeff=0.9957;MQ=91.50;MQ0=0;MQRankSum=-2.637;QD=32.29;ReadPosRankSum=0.535;VQSLOD=3.4274;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:4,17:21:54.18:700,54,0	0/0:18,0:18:54.17:0,54,791	0/0:33,0:33:75.32:0,75,1208	0/0:32,0:32:84.28:0,84,1227	0/0:31,0:31:90.27:0,90,1307	0/0:38,0:38:99:0,114,1683	0/0:22,0:22:63.21:0,63,941	0/0:36,0:36:99:0,99,1448	1/1:3,20:23:66.20:843,66,0	0/0:35,0:35:99:0,99,1484	0/0:25,0:25:72.23:0,72,1047	0/0:29,0:29:87.29:0,87,1301	0/0:36,0:36:99:0,108,1571	0/0:19,0:19:57.19:0,57,854	0/0:33,0:33:99:0,99,1451	0/0:27,0:27:81.27:0,81,1206	0/0:36,0:36:99:0,105,1571	0/0:6,0:6:18.06:0,18,260	0/0:14,0:14:42.13:0,42,612	0/0:26,0:26:75.25:0,75,1119	0/0:23,0:23:66.21:0,66,966	0/0:23,0:23:69.23:0,69,1034	0/0:24,0:24:72.24:0,72,1079	0/0:15,0:15:36.12:0,36,538	0/0:33,0:33:99:0,99,1484	0/0:24,0:24:72.23:0,72,1060	0/0:41,0:41:99:0,123,1843	0/0:12,0:12:36.12:0,36,539
chr10	18278099	.	CTGGGTAGTCT	C	3200.67	PASS	AB=0.970;AC=5;AF=0.089;AN=56;BaseQRankSum=9.198;DP=638;FS=6.462;HRun=0;HaplotypeScore=185.6143;InbreedingCoeff=0.8360;MQ=80.53;MQ0=0;MQRankSum=-9.886;QD=38.56;ReadPosRankSum=1.948;VQSLOD=2.8505;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,23:25:48.16:1521,48,0	0/0:8,0:8:24.07:0,24,1141	0/0:22,0:21:63.22:0,63,2897	0/0:16,0:16:48.11:0,48,1951	0/0:31,0:31:87.30:0,87,4318	0/0:27,0:27:81.28:0,81,4203	0/0:24,0:24:72.23:0,72,3625	0/0:21,0:21:63.22:0,63,3223	1/1:5,21:26:54.19:1800,54,0	0/0:30,0:30:90.30:0,90,4371	0/0:23,0:22:66.23:0,66,3308	0/0:15,0:15:45.15:0,45,2306	0/0:22,0:22:66.23:0,66,3111	0/0:24,0:24:69.24:0,69,3571	0/0:28,0:28:84.26:0,84,3917	0/1:31,1:32:3.71:4,0,4458	0/0:32,0:32:90.27:0,90,4624	0/0:10,0:10:30.08:0,30,1462	0/0:21,0:20:54.19:0,54,2614	0/0:37,0:37:99:0,111,5606	0/0:29,0:29:84.27:0,84,3956	0/0:19,0:19:51.18:0,51,2548	0/0:22,0:22:66.23:0,66,3404	0/0:23,0:23:69.24:0,69,3472	0/0:18,0:18:54.17:0,54,2488	0/0:20,0:20:60.21:0,60,3113	0/0:22,0:22:66.23:0,66,3339	0/0:11,0:11:33.11:0,33,1761
chr10	18278224	.	AT	A	6438.47	PASS	AB=0.946;AC=53;AF=0.946;AN=56;BaseQRankSum=1.059;DP=599;FS=14.412;HRun=11;HaplotypeScore=119.1048;InbreedingCoeff=0.0771;MQ=70.50;MQ0=0;MQRankSum=-4.365;QD=10.75;ReadPosRankSum=4.422;VQSLOD=2.6415;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:21:33.07:101,33,0	1/1:8,0:8:10.18:30,10,0	0/1:8,1:9:9.87:10,0,105	0/1:14,1:14:10.89:11,0,93	1/1:31,0:31:32.48:129,32,0	1/1:3,19:22:47.94:394,48,0	1/1:5,13:18:38.93:320,39,0	1/1:7,20:27:59.85:480,60,0	1/1:30,0:30:44.60:151,45,0	1/1:26,0:26:43.64:138,44,0	1/1:24,0:24:43.62:135,44,0	1/1:2,16:18:38.95:320,39,0	1/1:25,0:25:32.58:97,33,0	1/1:21,0:21:36.65:107,37,0	1/1:3,20:23:47.93:394,48,0	1/1:4,29:33:59.74:641,60,0	0/1:8,0:8:8.58:13,0,9	1/1:2,13:15:38.95:320,39,0	1/1:11,15:28:46.94:370,47,0	1/1:6,25:31:56.03:564,56,0	1/1:4,10:14:29.96:246,30,0	1/1:3,21:24:59.92:493,60,0	1/1:21,0:21:27.27:90,27,0	1/1:11,0:11:14.26:42,14,0	1/1:3,23:26:56.93:468,57,0	1/1:20,0:20:36.66:110,37,0	1/1:34,0:34:54.97:161,55,0	1/1:16,0:16:31.47:102,31,0
chr10	18278234	.	TTA	T	9404.50	PASS	AB=0.769;AC=28;AF=0.500;AN=56;BaseQRankSum=-17.606;DP=583;FS=0.000;HRun=0;HaplotypeScore=125.2048;InbreedingCoeff=0.8795;MQ=72.65;MQ0=0;MQRankSum=-1.942;QD=30.34;ReadPosRankSum=3.012;VQSLOD=6.7988;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,17:19:47.63:607,48,0	1/1:0,8:8:14.16:207,14,0	0/0:9,0:9:11.28:0,11,203	0/1:13,0:13:6.75:7,0,229	1/1:2,27:29:59.89:897,60,0	0/0:23,0:23:57.97:0,58,344	0/0:15,0:15:43.37:0,43,245	0/0:25,0:25:46.54:0,47,382	1/1:1,32:33:63.09:827,63,0	1/1:0,28:28:84.18:1040,84,0	1/1:1,23:24:71.98:892,72,0	0/0:18,0:18:43.16:0,43,241	1/1:0,25:25:48.16:667,48,0	1/1:0,24:24:57.12:769,57,0	0/0:27,0:27:66.87:0,67,438	0/0:33,0:33:86.65:0,87,521	0/1:1,6:7:4.68:152,0,5	0/0:16,0:16:46.32:0,46,259	0/0:21,0:21:44.42:0,44,300	0/0:27,0:27:41.27:0,41,343	0/0:13,0:13:37.74:0,38,222	0/0:23,0:23:63.50:0,64,348	1/1:0,20:20:38.51:519,39,0	1/1:0,9:9:21.07:293,21,0	0/0:23,0:23:54.63:0,55,282	1/1:0,20:20:60.15:797,60,0	1/1:0,34:34:81.26:1128,81,0	1/1:0,16:16:45.10:603,45,0
chr10	18278591	.	T	TA	360.36	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-4.001;DP=583;FS=1.933;HRun=10;HaplotypeScore=63.6259;InbreedingCoeff=0.9224;MQ=75.66;MQ0=1;MQRankSum=-1.034;QD=15.67;ReadPosRankSum=0.557;VQSLOD=4.0839;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,20:23:23.47:453,23,0	0/0:11,0:11:29.92:0,30,242	0/0:21,0:19:13.85:0,14,155	0/0:18,0:14:14.71:0,15,108	0/0:31,1:33:56.93:0,57,663	0/0:19,0:19:50.93:0,51,419	0/0:11,0:11:29.97:0,30,246	0/0:32,0:33:51.52:0,52,615	0/0:7,0:7:17.98:0,18,148	0/0:26,0:26:65.91:0,66,542	0/0:23,0:23:50.90:0,51,415	0/0:23,0:23:59.92:0,60,492	0/0:24,0:24:59.10:0,59,491	0/0:19,0:19:50.94:0,51,419	0/0:14,0:14:38.95:0,39,320	0/0:23,0:23:59.93:0,60,493	0/0:28,0:28:71.86:0,72,585	0/0:30,0:31:85.93:0,86,695	0/0:18,0:18:47.92:0,48,394	0/0:30,0:30:62.86:0,63,514	0/0:13,0:13:26.95:0,27,222	0/0:15,0:15:29.93:0,30,244	0/0:27,0:27:65.89:0,66,542	0/0:4,0:4:11.99:0,12,99	0/0:24,0:24:56.89:0,57,464	0/0:25,1:26:30.89:0,31,460	0/0:29,0:29:80.85:0,81,659	0/0:9,0:10:26.01:0,26,203
chr10	18279433	.	TGCCC	T	6393.67	PASS	AC=22;AF=0.423;AN=52;BaseQRankSum=-7.338;DP=473;FS=35.102;HRun=0;HaplotypeScore=68.7335;InbreedingCoeff=0.9369;MQ=40.66;MQ0=49;MQRankSum=-8.458;QD=38.52;ReadPosRankSum=1.281;VQSLOD=2.9662;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:22:51.07:0,51,1476	0/0:9,0:7:15.05:0,15,299	./.	0/0:9,0:1:3.01:0,3,87	0/0:30,0:25:42.14:0,42,837	1/1:0,19:18:24.08:502,24,0	1/1:1,11:10:24.08:477,24,0	1/1:2,23:21:60.18:1118,60,0	0/0:24,0:24:57.20:0,57,1610	0/0:17,0:10:30.10:0,30,568	0/0:31,0:23:50.87:0,51,934	1/1:0,20:20:42.14:879,42,0	0/0:18,0:17:36.12:0,36,709	0/0:16,0:11:21.07:0,21,403	1/1:0,18:18:39.13:816,39,0	1/1:0,12:12:24.08:502,24,0	0/0:27,0:13:15.05:0,15,287	1/1:0,10:8:9.03:188,9,0	1/1:0,19:15:39.12:758,39,0	1/1:1,14:13:33.08:649,33,0	./.	1/1:0,5:4:9.03:188,9,0	0/0:18,0:15:23.83:0,24,468	0/0:10,0:6:9.50:0,10,173	1/1:1,10:7:15.05:314,15,0	0/0:20,0:13:39.13:0,39,733	0/0:25,0:22:45.15:0,45,886	0/0:13,0:10:15.05:0,15,295
chr10	18279672	.	A	AACACAC	10205.35	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-1.490;DP=447;FS=7.227;HRun=0;HaplotypeScore=126.5712;InbreedingCoeff=0.4103;MQ=46.20;MQ0=9;MQRankSum=0.041;QD=24.59;ReadPosRankSum=1.476;VQSLOD=3.8435;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:18:3.01:36,3,0	1/1:6,3:6:12.04:365,12,0	0/0:17,0:12:3:0,3,30	0/0:15,0:9:3.01:0,3,61	1/1:21,1:21:21.04:438,21,0	1/1:16,0:17:21.07:539,21,0	1/1:14,0:15:12.04:258,12,0	1/1:28,0:25:31.80:591,32,0	1/1:11,0:11:9.03:216,9,0	1/1:15,5:20:36.08:844,36,0	1/1:12,2:12:17.58:453,18,0	1/1:12,0:13:18.05:416,18,0	1/1:12,6:19:27.09:802,27,0	1/1:7,5:13:27.09:796,27,0	1/1:10,2:13:21.07:571,21,0	1/1:13,0:13:12.04:299,12,0	1/1:14,1:13:12.03:167,12,0	1/1:14,0:14:5.90:100,6,0	1/1:16,0:15:9.81:137,10,0	1/1:15,0:11:3.01:49,3,0	1/1:12,0:12:3.01:54,3,0	1/1:14,0:16:9.03:207,9,0	1/1:14,4:15:17.93:429,18,0	1/1:11,1:12:9.03:223,9,0	1/1:13,0:11:12.04:274,12,0	1/1:15,3:20:39.13:1003,39,0	1/1:15,7:22:26.40:844,26,0	1/1:2,1:3:3.01:97,3,0
chr10	18279705	.	G	GAAA	6576.55	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=6.799;DP=575;FS=7.498;HRun=11;HaplotypeScore=131.8334;InbreedingCoeff=0.8819;MQ=52.21;MQ0=14;MQRankSum=-5.555;QD=14.39;ReadPosRankSum=-2.811;VQSLOD=1.9750;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:9,13:26:8.23:189,8,0	1/1:5,6:12:16.48:165,16,0	0/0:30,0:12:7.37:0,7,119	0/0:24,0:11:10.27:0,10,122	1/1:7,13:25:23.93:273,24,0	1/1:8,10:20:20.14:168,20,0	1/1:6,11:18:26.01:317,26,0	0/0:24,0:24:32.66:0,33,426	1/1:4,0:13:8.92:81,9,0	1/1:15,9:28:44.50:556,44,0	1/1:20,2:19:39.25:420,39,0	1/1:19,3:22:59.21:794,59,0	1/1:12,17:31:43.68:520,44,0	1/1:11,10:23:24.86:231,25,0	1/1:10,8:18:30.28:286,30,0	1/1:6,15:22:14.23:168,14,0	1/1:5,11:14:14.11:198,14,0	1/1:2,9:14:6.02:100,6,0	0/0:10,0:9:14.96:0,15,169	0/0:16,0:15:31.62:0,32,383	0/0:13,0:12:9.16:0,9,123	1/1:13,1:13:23.90:211,24,0	1/1:12,4:18:29.41:269,29,0	1/1:15,5:18:25.53:309,26,0	1/1:7,6:11:10.90:64,11,0	1/1:16,17:38:33.58:774,34,0	1/1:18,2:20:35.13:400,35,0	1/1:3,4:7:8.97:82,9,0
chr10	18280822	.	CAGAG	C	12895.46	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=15.928;DP=652;FS=3.954;HRun=0;HaplotypeScore=112.6900;InbreedingCoeff=0.9674;MQ=80.29;MQ0=1;MQRankSum=-0.398;QD=47.06;ReadPosRankSum=1.835;VQSLOD=5.7432;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:81.26:0,81,2083	0/0:13,0:13:39.13:0,39,987	0/0:19,0:19:38.70:0,39,797	0/0:19,0:19:0.94:0,1,591	0/0:33,0:33:90.30:0,90,2322	1/1:2,29:31:84.29:1545,84,0	1/1:1,18:19:48.16:883,48,0	1/1:1,25:26:75.26:1374,75,0	0/0:25,0:25:72.22:0,72,1763	0/0:29,0:29:87.29:0,87,2237	0/0:19,0:19:54.15:0,54,1240	1/1:3,24:27:69.24:1269,69,0	0/0:30,0:30:87.28:0,87,2236	0/0:25,0:25:69.21:0,69,1671	1/1:2,22:24:54.19:993,54,0	1/1:2,31:33:87.30:1601,87,0	0/0:19,0:19:54.19:0,54,1411	1/1:0,11:11:27.09:497,27,0	1/1:0,19:19:57.18:974,57,0	1/1:2,25:27:69.16:1199,69,0	1/1:3,20:23:48.16:883,48,0	1/1:0,20:19:54.19:993,54,0	0/0:23,0:23:69.24:0,69,1816	0/0:25,0:25:69.24:0,69,1821	1/1:0,14:14:39.09:682,39,0	0/0:25,0:25:75.26:0,75,1956	0/0:34,0:34:99:0,102,2560	0/0:11,0:11:33.11:0,33,852
chr10	18281383	.	CAAT	C	10718.59	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=14.916;DP=726;FS=4.436;HRun=0;HaplotypeScore=139.1072;InbreedingCoeff=0.9992;MQ=62.09;MQ0=2;MQRankSum=-1.971;QD=37.22;ReadPosRankSum=4.643;VQSLOD=5.5760;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,114,2198	1/1:0,9:9:20.66:240,21,0	0/0:30,0:24:53.26:0,53,694	0/0:31,0:30:73.37:0,73,1171	1/1:0,29:29:80.64:1105,81,0	0/0:23,0:23:69.12:0,69,1273	0/0:29,0:29:87.21:0,87,1670	0/0:30,0:30:47.18:0,47,1104	0/0:26,0:26:75.19:0,75,1546	1/1:0,27:27:77.52:1105,78,0	1/1:1,12:13:32.61:334,33,0	0/0:28,0:28:84.22:0,84,1710	1/1:0,40:40:90.27:1504,90,0	1/1:2,33:35:81.21:1330,81,0	0/0:22,0:22:66.18:0,66,1367	0/0:30,0:30:90.18:0,90,1714	1/1:1,32:33:39.42:1185,39,0	0/0:21,0:21:60.97:0,61,1146	0/0:25,0:25:72.09:0,72,1113	0/0:22,0:22:63.14:0,63,1207	0/0:47,0:47:99:0,137,2496	0/0:13,0:13:36.08:0,36,696	1/1:0,17:17:40.01:613,40,0	1/1:5,16:21:54.05:802,54,0	0/0:19,0:19:57.12:0,57,1083	1/1:2,29:31:86.87:1197,87,0	1/1:1,23:24:51.17:846,51,0	1/1:0,9:9:27.09:458,27,0
chr10	18292346	.	TAA	T	7448.43	PASS	AB=1.000;AC=26;AF=0.464;AN=56;BaseQRankSum=-18.415;DP=658;FS=1.778;HRun=11;HaplotypeScore=105.2774;InbreedingCoeff=0.8770;MQ=74.30;MQ0=4;MQRankSum=-3.262;QD=22.57;ReadPosRankSum=1.163;VQSLOD=4.5397;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:35.96:0,36,300	0/0:6,0:6:17.99:0,18,158	0/0:21,0:21:41.32:0,41,478	0/1:11,0:11:4.67:5,0,174	0/0:31,0:31:84.07:0,84,777	1/1:3,37:39:96.23:1022,96,0	1/1:2,8:10:18.04:192,18,0	1/1:11,35:46:99:1030,102,0	0/0:32,0:32:77.88:0,78,646	0/0:27,0:27:74.85:0,75,619	0/0:22,0:22:66.07:0,66,638	1/1:2,21:23:54.13:575,54,0	0/0:26,0:26:75.05:0,75,693	0/0:27,0:27:59.45:0,59,677	1/1:3,25:28:63.15:671,63,0	1/1:4,18:22:53.86:555,54,0	0/0:27,0:27:66.08:0,66,629	1/1:2,13:14:33.07:351,33,0	1/1:9,24:33:65.84:738,66,0	1/1:6,28:35:77.90:809,78,0	1/1:1,8:9:18.04:192,18,0	1/1:2,27:29:69.15:734,69,0	0/0:17,0:17:45.03:0,45,411	0/0:18,0:18:48.06:0,48,457	1/1:2,20:23:48.07:566,48,0	0/0:26,0:26:74.94:0,75,639	0/0:28,0:28:75.07:0,75,700	0/1:4,0:4:10.45:10,0,79
chr10	18292356	.	A	AT	2261.93	PASS	AB=1.000;AC=18;AF=0.321;AN=56;BaseQRankSum=-11.516;DP=671;FS=8.546;HRun=0;HaplotypeScore=112.8316;InbreedingCoeff=0.4630;MQ=70.29;MQ0=4;MQRankSum=-1.891;QD=7.94;ReadPosRankSum=-4.455;VQSLOD=1.6380;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,21:21:36.12:490,36,0	1/1:8,0:8:4.72:67,5,0	0/0:17,0:15:38.65:0,39,371	0/0:11,0:11:26.38:0,26,234	0/1:31,0:31:20.17:35,0,20	0/0:41,0:40:99:0,107,609	0/0:11,0:11:23.25:0,23,143	0/0:45,0:45:99:0,118,749	1/1:5,25:30:80.46:1049,80,0	1/1:33,0:33:38.11:247,38,0	0/0:22,0:22:21.88:0,22,70	0/0:23,0:23:57.76:0,58,322	0/1:27,0:27:13.36:49,0,13	0/0:27,0:27:9.60:0,10,30	0/0:28,0:28:66.38:0,66,368	0/0:19,0:18:51.72:0,52,268	0/1:28,0:28:25.56:48,0,26	0/0:16,0:15:40.62:0,41,241	0/0:29,0:28:77.90:0,78,428	0/0:32,0:32:86.56:0,87,482	0/0:10,0:10:23.24:0,23,137	0/0:29,0:29:78.03:0,78,435	1/1:19,0:19:0.71:77,1,0	0/1:19,0:19:27.42:27,0,31	0/0:26,0:26:66.67:0,67,395	1/1:35,0:35:37.12:259,37,0	0/1:30,0:30:14.60:85,0,15	0/1:4,0:4:5.50:15,0,5
chr10	18292645	.	CATCAGGAGCACTGA	C	2014.91	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.718;DP=751;FS=2.077;HRun=0;HaplotypeScore=278.9836;InbreedingCoeff=0.9979;MQ=89.08;MQ0=0;MQRankSum=-6.920;QD=44.78;ReadPosRankSum=1.704;VQSLOD=2.6093;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,36:45:50.48:2110,50,0	0/0:13,0:13:39.13:0,39,2390	0/0:35,0:35:99:0,99,5056	0/0:22,0:23:57.19:0,57,2943	0/0:32,0:32:90.31:0,90,6039	0/0:27,0:27:81.28:0,81,5109	0/0:24,0:24:69.24:0,69,4582	0/0:19,0:19:57.20:0,57,3470	0/0:20,0:20:57.20:0,57,3799	0/0:35,0:35:99:0,102,6147	0/0:21,0:21:54.15:0,54,3094	0/0:25,0:25:69.24:0,69,4649	0/0:27,0:27:78.27:0,78,4980	0/0:28,0:28:81.28:0,81,5235	0/0:33,0:33:93.32:0,93,6023	0/0:33,0:32:99:0,99,6500	0/0:31,0:31:93.30:0,93,6010	0/0:27,0:27:75.26:0,75,4826	0/0:15,0:15:45.15:0,45,2614	0/0:25,0:25:72.25:0,72,4651	0/0:47,0:47:99:0,135,8720	0/0:21,0:21:60.21:0,60,3891	0/0:16,0:16:42.13:0,42,2462	0/0:37,0:37:99:0,105,6807	0/0:25,0:25:72.25:0,72,4732	0/0:30,0:30:81.28:0,81,5431	0/0:28,0:28:75.24:0,75,4281	0/0:9,0:9:24.08:0,24,1531
chr10	18296252	.	CA	C	660.10	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=4.444;DP=492;FS=0.000;HRun=3;HaplotypeScore=54.7296;InbreedingCoeff=0.9874;MQ=79.56;MQ0=0;MQRankSum=-2.161;QD=30.00;ReadPosRankSum=2.496;VQSLOD=3.1276;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,14:14:42.13:520,42,0	0/0:5,0:5:15.05:0,15,216	0/0:16,0:16:45.15:0,45,621	0/0:13,0:13:35.90:0,36,457	0/0:19,0:19:57.18:0,57,801	0/0:23,0:23:69.23:0,69,991	0/0:18,0:18:54.17:0,54,756	0/0:35,0:35:99:0,105,1501	1/1:1,7:8:21.07:260,21,0	0/0:22,0:22:63.21:0,63,887	0/0:20,0:20:57.19:0,57,821	0/0:22,0:22:60.19:0,60,847	0/0:12,0:12:33.10:0,33,459	0/0:18,0:18:48.13:0,48,669	0/0:15,0:15:45.15:0,45,646	0/0:23,0:22:63.20:0,63,887	0/0:17,0:17:45.15:0,45,648	0/0:15,0:15:42.08:0,42,562	0/0:13,0:13:39.12:0,39,545	0/0:31,0:31:93.30:0,93,1320	0/0:15,0:15:42.14:0,42,600	0/0:25,0:25:69.22:0,69,972	0/0:20,0:20:54.18:0,54,775	0/0:16,0:16:42.13:0,42,584	0/0:15,0:15:45.15:0,45,646	0/0:15,0:15:45.15:0,45,648	0/0:20,0:19:54.03:0,54,757	0/0:7,0:7:21.07:0,21,302
chr10	18296308	.	T	TAA	6636.03	PASS	AB=0.843;AC=29;AF=0.518;AN=56;BaseQRankSum=-7.749;DP=517;FS=3.961;HRun=11;HaplotypeScore=80.5934;InbreedingCoeff=0.7928;MQ=78.27;MQ0=6;MQRankSum=-2.622;QD=22.57;ReadPosRankSum=1.273;VQSLOD=4.6758;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:9,3:19:39.09:455,39,0	0/1:2,5:9:11.56:165,0,12	0/1:27,0:19:15.97:16,0,67	0/1:32,0:20:9.04:9,0,122	1/1:4,19:25:63.14:851,63,0	0/0:17,0:18:45.01:0,45,486	0/0:12,0:12:23.99:0,24,233	0/0:9,0:33:64.46:0,64,287	1/1:0,6:7:17.55:226,18,0	1/1:2,11:15:38.60:511,39,0	1/1:4,21:27:69.47:862,69,0	0/0:18,0:19:44.77:0,45,413	1/1:5,10:18:38.03:458,38,0	1/1:6,10:17:24.08:347,24,0	0/0:14,0:15:36:0,36,399	0/0:19,0:19:32.91:0,33,369	1/1:3,8:13:18.06:261,18,0	0/0:14,0:14:33:0,33,311	0/0:4,0:20:43.75:0,44,189	0/0:5,0:22:44.11:0,44,198	0/0:2,0:8:19.46:0,19,100	0/0:19,0:19:48.06:0,48,465	1/1:4,18:24:57.19:809,57,0	1/1:3,7:10:18.06:260,18,0	0/0:22,0:23:53.98:0,54,567	1/1:3,8:16:35.56:435,36,0	1/1:5,20:25:55.88:755,56,0	1/1:0,5:6:15.05:217,15,0
chr10	18298051	.	CTTT	C	2188.79	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=11.577;DP=744;FS=1.814;HRun=3;HaplotypeScore=147.4736;InbreedingCoeff=0.9985;MQ=88.26;MQ0=0;MQRankSum=-11.068;QD=37.10;ReadPosRankSum=0.124;VQSLOD=2.1947;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,166,3886	0/0:14,0:14:42.14:0,42,1013	0/0:32,0:32:96.29:0,96,2110	0/0:27,0:27:63.29:0,63,1469	0/0:26,0:26:78.25:0,78,1802	0/0:27,0:27:81.26:0,81,1898	0/0:27,0:27:81.26:0,81,1899	1/1:1,15:16:45.15:734,45,0	0/0:27,0:27:81.28:0,81,1989	0/0:34,0:34:99:0,102,2363	0/0:15,0:15:45.15:0,45,1093	0/0:45,0:45:99:0,135,3197	0/0:46,0:46:99:0,138,3282	0/0:31,0:31:93.32:0,93,2264	0/0:33,0:33:99:0,99,2322	0/0:18,0:18:54.18:0,54,1285	0/0:37,0:36:99:0,111,2563	0/0:20,0:20:60.19:0,60,1404	1/1:1,10:11:30.10:489,30,0	1/1:0,17:17:39.13:636,39,0	1/1:3,12:15:30.10:489,30,0	0/0:29,0:29:87.28:0,87,2007	0/0:29,0:29:87.30:0,87,2099	0/0:33,0:33:99:0,99,2314	0/0:18,0:18:54.19:0,54,1292	0/0:32,0:32:96.33:0,96,2367	0/0:23,0:23:69.24:0,69,1700	0/0:7,0:7:21.07:0,21,516
chr10	18298466	.	GA	G	11863.58	PASS	AB=0.565;AC=51;AF=0.911;AN=56;BaseQRankSum=-3.087;DP=565;FS=12.849;HRun=10;HaplotypeScore=67.1736;InbreedingCoeff=0.7442;MQ=75.18;MQ0=0;MQRankSum=-5.237;QD=22.30;ReadPosRankSum=4.835;VQSLOD=4.6969;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,15:15:44.99:391,45,0	1/1:1,6:7:17.99:156,18,0	0/0:17,2:18:9.75:0,10,292	0/0:14,0:14:9.68:0,10,181	1/1:3,28:31:77.97:677,78,0	1/1:0,18:18:53.99:469,54,0	0/1:3,10:13:9.19:158,0,9	1/1:4,25:29:74.63:647,75,0	1/1:3,18:21:50.98:443,51,0	1/1:4,17:22:59.98:518,60,0	1/1:7,20:27:65.97:573,66,0	1/1:1,15:16:41.99:364,42,0	1/1:4,19:23:59.98:520,60,0	1/1:2,20:22:62.97:543,63,0	1/1:0,24:24:68.99:599,69,0	1/1:1,15:16:41.99:365,42,0	1/1:4,24:28:77.95:671,78,0	1/1:3,20:25:58.06:481,58,0	1/1:3,13:16:41.85:350,42,0	1/1:1,13:14:35.98:312,36,0	1/1:2,19:21:53.98:469,54,0	1/1:2,16:18:23.51:366,24,0	1/1:6,14:20:41.97:365,42,0	1/1:4,17:21:50.97:442,51,0	1/1:1,17:18:47.99:417,48,0	1/1:4,17:21:56.99:494,57,0	1/1:3,23:27:71.01:605,71,0	1/1:0,19:19:53.99:469,54,0
chr10	18298540	.	C	CT	10705.26	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-10.074;DP=634;FS=5.054;HRun=2;HaplotypeScore=69.8677;InbreedingCoeff=0.9956;MQ=82.64;MQ0=0;MQRankSum=-3.988;QD=37.83;ReadPosRankSum=3.577;VQSLOD=5.6061;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:16:42.13:0,42,521	1/1:2,4:6:12.04:173,12,0	0/0:21,0:21:57.17:0,57,698	0/0:17,0:17:48.11:0,48,560	1/1:2,28:30:72.24:1035,72,0	0/0:31,0:30:93.28:0,93,1139	0/0:13,0:13:36.10:0,36,435	0/0:37,0:36:99:0,108,1317	0/0:17,0:17:51.16:0,51,632	1/1:1,36:37:99:1551,108,0	1/1:1,20:21:60.20:864,60,0	0/0:22,0:22:60.19:0,60,744	1/1:5,24:29:78.11:1044,78,0	1/1:3,25:28:75.16:1033,75,0	0/0:24,0:24:63.20:0,63,781	0/0:15,0:15:42.13:0,42,521	1/1:3,23:26:75.23:1043,75,0	0/0:27,0:27:72.23:0,72,890	0/0:15,0:15:45.12:0,45,536	0/0:28,0:28:78.24:0,78,967	0/0:26,0:26:66.19:0,66,806	0/0:22,0:22:57.18:0,57,707	1/1:2,24:26:69.23:992,69,0	1/1:1,16:17:39.12:543,39,0	0/0:19,0:19:54.17:0,54,669	1/1:1,19:20:57.18:806,57,0	1/1:0,30:30:81.27:1166,81,0	1/1:2,11:13:33.09:456,33,0
chr10	18298826	.	CA	C	1060.31	PASS	AB=0.868;AC=18;AF=0.321;AN=56;BaseQRankSum=-5.007;DP=565;FS=15.666;HRun=15;HaplotypeScore=87.8051;InbreedingCoeff=0.6272;MQ=55.00;MQ0=7;MQRankSum=5.155;QD=5.30;ReadPosRankSum=6.278;VQSLOD=0.7520;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:25:29.51:0,30,152	0/0:4,0:4:8.99:0,9,46	0/1:10,0:7:2.57:3,0,54	0/0:8,0:5:12.62:0,13,70	0/0:13,0:35:27.65:0,28,146	1/1:6,11:18:37.44:236,37,0	1/1:7,8:19:20.81:114,21,0	0/0:32,0:31:31.72:0,32,390	0/0:13,0:10:3.02:0,3,7	0/0:10,0:20:19.40:0,19,105	0/0:10,0:26:17.53:0,18,81	1/1:12,4:18:31.90:178,32,0	0/0:16,0:16:21.29:0,21,132	0/0:21,0:21:36.08:0,36,223	1/1:6,13:21:24.49:146,24,0	1/1:10,7:20:4.02:93,4,0	0/0:10,0:26:17.21:0,17,93	0/1:8,11:18:1.03:115,0,1	0/1:14,1:17:6.56:7,0,119	0/0:22,0:24:22.28:0,22,239	0/1:19,0:20:3.42:3,0,99	1/1:4,10:15:1.33:131,1,0	0/0:4,0:13:5.68:0,6,28	0/0:4,0:17:5.72:0,6,29	1/1:5,15:22:15.25:215,15,0	0/0:8,0:23:26.66:0,27,155	0/0:12,0:27:11.96:0,12,53	0/0:7,0:19:8.79:0,9,56
chr10	18299503	.	TTGGCTCAG	T	9943.44	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=13.676;DP=412;FS=1.946;HRun=0;HaplotypeScore=107.6260;InbreedingCoeff=0.9576;MQ=55.86;MQ0=13;MQRankSum=-14.196;QD=59.54;ReadPosRankSum=2.905;VQSLOD=4.9644;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:23:63.20:0,63,2517	1/1:1,7:8:12.51:336,13,0	0/0:9,0:6:11.99:0,12,318	0/0:13,0:9:27.06:0,27,928	1/1:5,15:19:36.12:1003,36,0	0/0:22,0:22:51.16:0,51,1997	0/0:10,0:10:30.10:0,30,1307	0/0:20,0:20:48.16:0,48,1790	0/0:11,0:11:33.11:0,33,1353	1/1:5,15:20:45.12:1159,45,0	1/1:1,13:14:27.09:754,27,0	0/0:16,0:16:45.14:0,45,1872	1/1:0,12:12:33.11:923,33,0	1/1:2,16:18:45.15:1258,45,0	0/0:9,0:9:24.07:0,24,949	0/0:14,0:14:36.12:0,36,1550	1/1:1,20:20:45.15:1243,45,0	0/0:23,0:22:66.23:0,66,2865	0/0:14,0:13:39.13:0,39,1640	0/0:15,0:14:30.10:0,30,1061	0/0:15,0:15:42.14:0,42,1789	0/0:10,0:10:27.09:0,27,1004	1/1:2,7:9:21.07:581,21,0	1/1:3,6:7:9.03:252,9,0	0/0:18,0:18:54.19:0,54,2376	1/1:3,13:16:39.13:1091,39,0	1/1:0,19:18:45.15:1259,45,0	1/1:0,1:1:3.01:84,3,0
chr10	18301564	.	A	AGAGGT	7821.86	PASS	AB=0.983;AC=47;AF=0.839;AN=56;BaseQRankSum=-3.856;DP=558;FS=19.147;HRun=0;HaplotypeScore=175.7106;InbreedingCoeff=0.4168;MQ=90.53;MQ0=1;MQRankSum=-0.539;QD=15.80;ReadPosRankSum=2.355;VQSLOD=3.4514;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:27:8.36:42,8,0	1/1:5,0:5:5.50:37,5,0	0/0:43,0:36:6.62:0,7,207	0/1:54,0:39:23.14:23,0,111	1/1:21,0:21:8.23:80,8,0	1/1:14,2:15:18.06:486,18,0	1/1:17,0:17:14.36:304,14,0	1/1:25,0:24:15.04:347,15,0	0/0:11,0:11:9.42:0,9,41	1/1:19,0:19:24.38:269,24,0	1/1:12,0:12:6.88:54,7,0	1/1:15,5:20:42.13:1069,42,0	1/1:17,0:17:20.17:204,20,0	0/1:15,0:15:5.63:131,0,6	1/1:15,12:27:35.99:909,36,0	1/1:6,17:23:21.07:548,21,0	1/1:16,0:16:8.57:80,9,0	1/1:11,11:22:24.08:663,24,0	1/1:16,0:16:12.04:313,12,0	1/1:13,8:21:18.06:472,18,0	0/1:18,1:18:2.85:172,0,3	1/1:10,11:21:18.06:504,18,0	1/1:12,0:12:9.02:134,9,0	0/0:9,0:9:2.50:0,2,9	1/1:19,2:21:24.08:574,24,0	1/1:17,0:17:17.20:171,17,0	1/1:25,0:25:12.67:217,13,0	1/1:7,0:7:5.17:20,5,0
chr10	18301591	.	AGGTAATC	A	5411.48	PASS	AB=0.939;AC=40;AF=0.714;AN=56;BaseQRankSum=0.209;DP=492;FS=1.435;HRun=0;HaplotypeScore=184.7079;InbreedingCoeff=-0.2430;MQ=80.60;MQ0=2;MQRankSum=-2.840;QD=11.74;ReadPosRankSum=5.138;VQSLOD=3.5316;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:12,0:12:8.60:60,9,0	1/1:4,0:4:5.50:37,5,0	0/0:31,0:25:11.90:0,12,460	0/1:48,0:35:3.91:4,0,428	1/1:13,0:13:7.82:79,8,0	0/1:18,2:19:99:254,0,881	0/1:24,4:28:99:102,0,969	0/1:21,2:23:99:135,0,941	0/1:8,0:8:3.89:81,0,4	1/1:12,0:12:31.37:315,31,0	1/1:7,0:7:9.50:111,9,0	0/1:18,8:26:99:667,0,725	1/1:13,0:12:20.19:223,20,0	1/1:12,0:12:27.02:353,27,0	0/1:34,0:35:99:478,0,1235	0/1:29,0:29:55.77:56,0,871	1/1:8,0:8:8.57:80,9,0	0/1:24,0:23:99:369,0,650	0/1:10,2:11:99:207,0,399	0/1:15,0:15:99:178,0,252	0/1:38,3:40:99:155,0,952	0/1:18,0:18:99:357,0,140	1/1:10,0:10:6.94:130,7,0	1/1:5,0:5:4.26:42,4,0	0/1:14,1:15:99:424,0,369	1/1:7,0:7:17.20:171,17,0	1/1:13,0:13:28.07:321,28,0	1/1:2,0:2:5.17:20,5,0
chr10	18301593	.	GTAA	G	465.96	PASS	AB=0.996;AC=30;AF=0.536;AN=56;BaseQRankSum=7.372;DP=467;FS=0.447;HRun=0;HaplotypeScore=170.1459;InbreedingCoeff=0.0838;MQ=76.17;MQ0=1;MQRankSum=-2.917;QD=1.60;ReadPosRankSum=3.541;VQSLOD=2.6441;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,1:11:7.53:70,8,0	1/1:4,0:4:2.80:7,3,0	0/0:25,0:23:21.89:0,22,707	0/1:38,0:29:23.29:23,0,611	0/1:12,0:12:2.69:3,0,18	0/1:21,0:20:11.83:12,0,922	0/0:28,0:28:20.64:0,21,1089	0/0:21,0:21:16.76:0,17,1030	1/1:3,5:8:12.04:204,12,0	0/1:11,0:11:9.25:17,0,9	1/1:7,0:7:4.36:12,4,0	0/1:26,0:26:80.47:80,0,848	0/1:13,0:12:10.65:11,0,30	1/1:11,0:11:13.82:41,14,0	0/0:35,0:35:35.64:0,36,1231	0/0:27,0:27:42.53:0,43,887	1/1:8,0:8:2.49:7,2,0	0/0:25,0:24:31.08:0,31,741	0/1:12,0:11:27.63:28,0,425	0/0:14,0:14:1.17:0,1,338	0/1:41,1:41:9.84:10,0,1060	0/1:16,0:16:18.04:18,0,195	0/1:10,0:10:0.99:3,0,1	1/1:4,0:4:2.80:7,3,0	0/1:14,0:14:30.17:30,0,375	0/1:7,0:7:8.93:9,0,15	1/1:13,0:13:12.90:36,13,0	1/1:2,0:2:2.49:7,2,0
chr10	18301594	.	TAA	T	1400.69	PASS	AB=0.986;AC=29;AF=0.518;AN=56;BaseQRankSum=6.817;DP=427;FS=1.496;HRun=2;HaplotypeScore=154.5247;InbreedingCoeff=0.1988;MQ=77.58;MQ0=1;MQRankSum=-2.161;QD=6.28;ReadPosRankSum=2.143;VQSLOD=0.4133;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,0:7:5.50:40,6,0	1/1:3,0:3:6.01:60,6,0	0/1:23,1:22:11.26:11,0,664	0/1:32,2:27:41.89:42,0,539	0/1:9,0:9:15.86:43,0,16	0/0:20,0:19:9.06:0,9,822	0/0:26,0:26:34.54:0,35,975	0/0:20,0:20:33.41:0,33,1014	1/1:5,0:5:11.43:57,11,0	0/1:11,0:11:0.79:199,0,1	1/1:4,0:4:9.02:93,9,0	0/1:25,0:25:22.59:23,0,781	0/1:10,0:10:22.76:137,0,23	1/1:10,0:10:24.03:244,24,0	0/0:32,0:34:59.97:0,60,1159	0/0:26,0:26:47.89:0,48,793	1/1:8,0:8:6:54,6,0	0/0:25,0:24:11.40:0,11,698	0/1:12,0:11:11.34:11,0,382	0/0:11,0:11:19.65:0,20,350	0/0:41,1:41:5.85:0,6,957	0/1:10,0:10:1.56:2,0,190	0/1:8,0:8:3.83:66,0,4	1/1:4,0:4:4.25:34,4,0	0/1:14,0:14:25.34:25,0,350	0/1:7,0:7:8.43:122,0,8	1/1:13,0:13:27.02:264,27,0	1/1:2,0:2:6.01:57,6,0
chr10	18301596	.	ATC	A	2692.53	PASS	AB=0.955;AC=34;AF=0.607;AN=56;BaseQRankSum=5.748;DP=414;FS=0.000;HRun=0;HaplotypeScore=147.5402;InbreedingCoeff=0.4291;MQ=72.15;MQ0=1;MQRankSum=-3.105;QD=12.18;ReadPosRankSum=0.805;VQSLOD=2.9973;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,1:6:5.75:61,6,0	1/1:0,3:3:6.02:98,6,0	0/0:21,1:20:17.94:0,18,661	0/1:29,1:26:28.36:28,0,589	1/1:0,8:8:6.02:97,6,0	0/1:18,2:19:10.21:10,0,833	0/0:27,0:27:34.88:0,35,1004	0/0:20,0:20:31.06:0,31,967	1/1:5,0:5:11.08:50,11,0	1/1:0,8:8:24.08:390,24,0	1/1:0,4:4:9.03:146,9,0	0/1:25,0:25:42.45:42,0,816	1/1:1,7:8:18.06:285,18,0	1/1:1,8:9:24.08:385,24,0	0/0:34,0:34:31.34:0,31,1145	0/0:24,0:24:47.83:0,48,831	1/1:0,7:7:6.02:97,6,0	0/1:25,0:24:36.44:36,0,700	0/1:11,1:11:23.21:23,0,380	0/0:12,0:12:19.59:0,20,418	0/0:40,5:44:5.24:0,5,1081	0/0:9,0:9:15.40:0,15,219	1/1:1,7:8:11.83:145,12,0	1/1:0,4:4:4.26:52,4,0	0/1:14,0:14:99:138,0,385	1/1:0,5:5:15.05:244,15,0	1/1:1,12:13:30.09:461,30,0	1/1:0,2:2:6.02:98,6,0
chr10	18301608	.	ATC	A	1541.45	PASS	AB=0.972;AC=27;AF=0.500;AN=54;BaseQRankSum=9.314;DP=388;FS=2.870;HRun=0;HaplotypeScore=147.2510;InbreedingCoeff=0.7569;MQ=71.03;MQ0=3;MQRankSum=-4.801;QD=17.52;ReadPosRankSum=-2.151;VQSLOD=3.5756;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,1:2:6.02:81,6,0	1/1:0,2:2:3.01:49,3,0	0/0:19,0:17:13.11:0,13,673	0/1:34,0:28:11.43:11,0,762	./.	0/0:19,0:19:55.92:0,56,1044	0/0:33,0:33:78.87:0,79,1491	0/0:22,0:22:64.95:0,65,1181	1/1:0,3:3:9.03:147,9,0	1/1:0,5:5:15.05:243,15,0	1/1:0,4:4:9.03:146,9,0	0/0:27,0:27:76.84:0,77,1463	1/1:0,4:4:6.02:97,6,0	1/1:0,8:8:21.07:334,21,0	0/0:37,0:37:87.71:0,88,1731	0/0:23,0:23:54.19:0,54,1075	1/1:0,2:2:3.01:48,3,0	0/0:21,0:20:45.15:0,45,892	0/0:11,0:11:29.46:0,29,546	0/0:13,0:13:33.58:0,34,659	0/0:49,6:54:85.95:0,86,1716	0/0:7,0:7:21.07:0,21,421	1/1:0,4:4:5.81:48,6,0	1/1:1,6:7:6.47:98,6,0	0/0:9,0:9:27.09:0,27,544	1/1:0,1:1:3.01:49,3,0	1/1:0,9:9:18.06:292,18,0	1/1:0,2:2:6.02:98,6,0
chr10	18301617	.	GTAA	G	732.86	PASS	AB=0.888;AC=14;AF=0.280;AN=50;BaseQRankSum=7.950;DP=410;FS=14.738;HRun=0;HaplotypeScore=160.8796;InbreedingCoeff=0.6201;MQ=72.30;MQ0=5;MQRankSum=-0.982;QD=7.97;ReadPosRankSum=-3.186;VQSLOD=1.7353;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:2,0:2:2.51:0,3,14	./.	0/0:20,0:16:41.61:0,42,742	0/1:44,1:34:54.54:55,0,1038	0/0:3,2:5:0.34:0,0,1	0/0:18,0:18:51.13:0,51,1111	0/0:34,0:34:78.11:0,78,1523	0/0:21,0:21:53:0,53,1163	1/1:3,0:3:5.36:21,5,0	1/1:2,2:4:6.02:102,6,0	1/1:1,3:4:6.02:102,6,0	0/0:28,0:28:74.35:0,74,1414	0/1:4,1:5:9.96:45,0,10	1/1:4,6:10:18.01:288,18,0	0/0:34,0:34:90.25:0,90,1853	0/0:23,0:23:60.16:0,60,1267	0/0:4,0:4:3.37:0,3,17	0/0:21,0:19:45.12:0,45,1008	0/0:14,0:14:38.49:0,38,851	0/0:15,0:15:39.93:0,40,747	0/0:55,1:55:88.64:0,89,1865	0/0:6,0:6:17.95:0,18,276	0/0:2,1:3:0:0,0,0	1/1:4,2:6:6.85:75,7,0	0/0:9,0:9:27.09:0,27,606	./.	1/1:4,6:10:12.03:203,12,0	./.
chr10	18301620	.	ATC	A	421.82	PASS	AB=1.000;AC=21;AF=0.420;AN=50;BaseQRankSum=7.596;DP=397;FS=12.311;HRun=0;HaplotypeScore=161.3144;InbreedingCoeff=0.7342;MQ=75.16;MQ0=7;MQRankSum=-4.595;QD=4.39;ReadPosRankSum=-4.182;VQSLOD=0.9362;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,2:2:5.89:64,6,0	./.	0/0:25,0:17:36.17:0,36,659	0/1:54,0:37:9.30:9,0,923	0/0:2,1:3:0:0,0,0	0/0:17,0:17:47.96:0,48,836	0/0:32,0:32:65.11:0,65,1069	0/0:21,0:21:56.88:0,57,1062	1/1:0,2:2:6.02:98,6,0	1/1:3,0:2:5.60:26,6,0	1/1:3,0:3:5.60:26,6,0	0/0:27,0:27:69.31:0,69,1140	1/1:1,1:2:5.81:62,6,0	1/1:6,2:8:22.53:111,23,0	0/0:33,0:33:67.86:0,68,1359	0/0:21,0:21:47.76:0,48,1003	1/1:1,2:2:6.02:89,6,0	0/0:17,1:16:42.14:0,42,810	0/0:14,0:14:38.49:0,38,710	0/0:15,0:15:32.64:0,33,567	0/0:48,6:54:88.62:0,89,1547	0/0:6,0:6:9.03:0,9,173	1/1:1,1:2:0.47:1,0,0	1/1:3,3:6:6.19:40,6,0	0/0:12,0:12:30.05:0,30,533	./.	1/1:6,1:7:14.04:70,14,0	./.
chr10	18301632	.	A	ATC	2983.43	PASS	AB=0.788;AC=12;AF=0.231;AN=52;BaseQRankSum=-1.926;DP=418;FS=0.000;HRun=0;HaplotypeScore=133.8304;InbreedingCoeff=-0.3740;MQ=69.13;MQ0=37;MQRankSum=-2.059;QD=12.18;ReadPosRankSum=2.777;VQSLOD=3.3906;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:9:14.67:0,15,169	./.	0/0:33,0:12:30.29:0,30,338	0/0:67,0:35:89.12:0,89,1046	0/0:7,0:7:3:0,3,43	0/1:12,7:17:99:152,0,320	0/1:26,5:31:99:199,0,524	0/1:14,2:15:99:117,0,361	0/0:4,0:4:0.83:0,1,134	0/0:3,0:2:6.02:0,6,98	0/0:5,0:4:2.97:0,3,20	0/1:11,8:19:99:405,0,316	0/0:3,0:3:6.02:0,6,98	0/0:8,0:8:18.90:0,19,253	0/1:17,11:28:99:519,0,428	0/1:10,8:20:99:532,0,204	0/1:7,0:6:8.85:9,0,91	0/1:15,2:15:99:100,0,425	0/1:14,4:12:99:212,0,261	0/1:6,5:11:99:195,0,129	0/1:36,20:54:99:675,0,315	0/1:2,1:3:2.21:2,0,41	./.	0/0:6,0:6:6.47:0,6,73	0/0:7,6:13:7.95:0,8,189	0/0:4,0:1:3.01:0,3,47	0/0:5,0:5:9.03:0,9,146	0/0:1,0:1:3.01:0,3,49
chr10	18301655	.	T	TA	1008.15	PASS	AB=0.831;AC=24;AF=0.444;AN=54;BaseQRankSum=1.841;DP=456;FS=10.691;HRun=0;HaplotypeScore=119.5682;InbreedingCoeff=-0.0910;MQ=54.64;MQ0=75;MQRankSum=-3.568;QD=2.96;ReadPosRankSum=0.448;VQSLOD=2.5474;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:18,0:13:18.28:18,0,86	./.	0/1:39,0:4:9.01:9,0,14	0/1:90,0:24:36.95:37,0,268	0/0:6,2:7:2.47:0,2,16	0/1:19,1:17:0.22:78,0,0	1/1:32,0:32:17.30:81,17,0	0/0:9,0:4:12.04:0,12,162	0/0:4,0:4:5.37:0,5,90	0/1:6,1:4:31.24:42,0,31	0/1:4,1:4:2.64:3,0,7	1/1:12,0:12:22.31:109,22,0	0/1:3,4:6:26.34:156,0,26	0/1:3,2:5:22.28:79,0,22	1/1:23,0:21:22.46:131,22,0	1/1:14,0:14:13.59:85,14,0	0/1:13,4:14:43.37:43,0,102	1/1:16,0:14:5.85:48,6,0	0/0:14,0:5:5.96:0,6,69	0/1:6,0:6:1.24:1,0,76	0/0:47,1:46:21.65:0,22,323	0/0:4,0:3:2.92:0,3,17	0/1:4,1:3:13.94:14,0,35	0/0:6,4:9:3.62:0,4,32	0/0:15,0:14:0.34:0,0,39	0/1:10,3:9:68.21:114,0,68	0/1:1,3:4:24.30:82,0,24	0/1:1,1:2:35.82:38,0,36
chr10	18301656	.	G	GA	4938.96	PASS	AB=0.875;AC=32;AF=0.593;AN=54;BaseQRankSum=-2.028;DP=439;FS=4.280;HRun=0;HaplotypeScore=96.5951;InbreedingCoeff=-0.1107;MQ=52.70;MQ0=77;MQRankSum=-1.634;QD=12.26;ReadPosRankSum=-1.256;VQSLOD=5.3773;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:13,2:10:74.06:74,0,89	./.	0/1:41,0:4:1.35:1,0,17	0/1:94,0:22:99:120,0,170	1/1:6,2:7:3.48:34,3,0	1/1:4,14:15:35.08:493,35,0	1/1:13,16:29:45.15:711,45,0	0/0:8,1:4:8.98:0,9,123	0/0:4,0:4:2.98:0,3,28	0/1:5,1:3:31.41:82,0,31	0/1:5,1:4:4.36:35,0,4	1/1:0,11:11:30.10:455,30,0	1/1:7,0:6:5.36:174,5,0	0/1:5,0:5:0.22:82,0,0	1/1:1,20:19:48.09:721,48,0	1/1:0,11:11:33.11:499,33,0	0/1:13,3:14:58.28:192,0,58	1/1:5,8:12:31.60:408,32,0	0/0:13,0:5:3.84:0,4,29	0/1:3,2:5:68.85:119,0,69	0/1:45,8:48:99:270,0,122	1/1:1,3:3:2.73:18,3,0	0/1:4,1:3:13.91:14,0,32	0/0:8,2:9:2.65:0,3,8	0/1:3,12:14:32.82:46,0,33	0/1:11,2:9:17.76:255,0,18	0/1:4,0:4:0.33:95,0,0	0/1:2,0:2:35.80:40,0,36
chr10	18301670	.	GA	G	926.59	PASS	AB=0.753;AC=7;AF=0.130;AN=54;BaseQRankSum=-2.270;DP=419;FS=12.827;HRun=1;HaplotypeScore=89.3509;InbreedingCoeff=-0.0776;MQ=38.89;MQ0=108;MQRankSum=-1.691;QD=9.36;ReadPosRankSum=-1.351;VQSLOD=-0.2054;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:16,1:12:62.58:63,0,218	./.	0/0:46,0:1:3.01:0,3,47	0/0:85,1:6:14.80:0,15,145	0/0:8,0:7:5.83:0,6,55	0/1:10,2:9:42.52:43,0,148	0/1:16,6:22:74.13:153,0,74	0/0:13,0:4:9.03:0,9,143	0/0:7,0:6:16.60:0,17,225	0/0:5,0:3:9.03:0,9,139	0/0:6,0:4:6.88:0,7,74	0/1:3,6:8:2.67:163,0,3	0/0:7,0:6:18.05:0,18,266	0/0:4,0:4:9.03:0,9,136	0/1:9,9:16:96.96:346,0,97	0/1:5,6:10:89.18:221,0,89	0/0:17,0:14:31.99:0,32,373	0/1:7,3:8:63.11:63,0,85	0/0:11,0:3:6.02:0,6,84	0/0:6,0:5:8.24:0,8,101	0/0:56,0:49:56.30:0,56,701	0/0:4,0:3:0:0,0,0	0/0:6,0:4:6.01:0,6,64	0/0:11,0:10:11.06:0,11,120	0/0:9,0:8:10.83:0,11,109	0/0:11,0:8:24.07:0,24,335	0/0:5,0:5:12.04:0,12,186	0/0:2,0:2:6.02:0,6,96
chr10	18301690	.	G	GA	1752.61	PASS	AB=0.853;AC=29;AF=0.537;AN=54;BaseQRankSum=3.470;DP=453;FS=2.578;HRun=0;HaplotypeScore=93.1170;InbreedingCoeff=-0.1356;MQ=42.67;MQ0=87;MQRankSum=-3.359;QD=6.26;ReadPosRankSum=0.956;VQSLOD=3.0314;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:14,4:14:83.79:84,0,192	./.	0/0:47,0:2:1.48:0,1,4	0/0:99,0:10:11.70:0,12,129	1/1:6,1:6:6.02:81,6,0	1/1:3,2:9:1.21:68,1,0	0/1:7,14:19:7.41:86,0,7	0/0:14,0:9:9.64:0,10,217	1/1:1,6:6:17.55:245,18,0	0/0:5,0:3:1.68:0,2,74	0/1:7,2:8:26.49:66,0,26	1/1:8,1:10:13.09:68,13,0	0/1:7,0:7:21.45:21,0,143	0/1:6,1:7:11.87:12,0,95	0/1:7,9:14:15.52:284,0,16	1/1:6,5:12:32.19:329,32,0	0/1:13,2:13:56.10:82,0,56	1/1:10,2:10:17.09:149,17,0	1/1:12,1:2:2.63:47,3,0	0/0:4,0:3:5.81:0,6,55	0/1:66,2:62:18.09:18,0,996	1/1:3,0:4:5.63:23,6,0	0/1:5,1:5:16.27:48,0,16	0/1:10,0:9:28.17:28,0,84	0/1:4,1:6:20.42:29,0,20	0/1:11,0:7:78.06:78,0,106	0/1:5,2:7:51.16:67,0,51	0/0:3,0:3:9:0,9,91
chr10	18301694	.	GA	G	493.54	PASS	AB=0.930;AC=18;AF=0.333;AN=54;BaseQRankSum=-1.891;DP=484;FS=5.922;HRun=1;HaplotypeScore=103.8575;InbreedingCoeff=-0.1606;MQ=42.27;MQ0=92;MQRankSum=-1.514;QD=2.84;ReadPosRankSum=0.941;VQSLOD=-0.1911;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:19:28.33:0,28,408	./.	0/0:45,0:2:3.27:0,3,15	0/0:98,3:11:20.80:0,21,168	0/1:8,1:7:13.52:14,0,41	0/1:10,1:9:6.05:16,0,6	0/1:24,1:23:51.41:69,0,51	0/0:17,0:9:24.08:0,24,362	0/0:7,0:6:16.57:0,17,106	0/1:6,0:3:3.56:4,0,86	0/1:8,1:8:5.77:6,0,50	1/1:13,0:12:18.34:155,18,0	0/1:7,0:7:17.17:17,0,207	0/1:6,1:7:4.81:5,0,219	0/1:15,1:14:39.94:40,0,166	0/1:12,1:13:68.16:68,0,102	0/1:15,1:14:69.64:70,0,151	0/1:12,1:11:84.80:85,0,112	0/0:16,0:3:6.48:0,6,61	0/0:3,0:2:5.38:0,5,55	0/0:68,0:62:49.81:0,50,1400	1/1:5,0:3:4.03:12,4,0	0/0:8,0:6:5.96:0,6,53	0/0:12,0:11:15:0,15,166	0/1:5,1:6:13.61:14,0,15	0/1:11,0:7:71.96:72,0,135	0/1:6,1:7:0.93:1,0,143	0/0:4,0:4:12.04:0,12,161
chr10	18301723	.	TG	T	1200.82	PASS	AB=0.931;AC=15;AF=0.268;AN=56;BaseQRankSum=8.948;DP=628;FS=2.327;HRun=2;HaplotypeScore=127.4310;InbreedingCoeff=-0.2010;MQ=56.53;MQ0=60;MQRankSum=-3.898;QD=7.37;ReadPosRankSum=-0.237;VQSLOD=0.7954;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:16,14:27:99:385,0,206	1/1:2,0:2:5.98:47,6,0	0/0:65,0:10:25.89:0,26,348	0/0:122,0:27:16.32:0,16,376	0/1:13,1:13:33.57:40,0,34	0/0:16,0:15:25.76:0,26,344	0/0:28,0:25:66.17:0,66,972	0/0:24,0:18:42.14:0,42,643	0/1:3,6:8:70.78:225,0,71	0/1:7,0:5:43.72:44,0,93	0/1:7,0:6:21.95:22,0,38	0/0:19,0:19:28.20:0,28,349	0/1:10,0:10:39.81:99,0,40	0/1:8,0:8:3.25:3,0,83	0/0:23,0:23:58.12:0,58,850	0/0:20,0:20:42.32:0,42,588	0/1:21,0:20:90.52:91,0,201	0/0:19,0:16:30.45:0,30,390	0/0:28,0:13:32.32:0,32,467	0/0:7,0:7:21.07:0,21,325	0/0:76,0:72:99:0,119,2213	0/0:5,0:4:8.05:0,8,100	0/1:9,0:7:41.94:42,0,75	0/1:25,0:24:34.02:240,0,34	0/0:12,0:12:28.05:0,28,410	0/1:9,0:5:28.69:29,0,128	0/1:7,1:7:83.51:84,0,93	0/1:4,0:4:8.02:8,0,77
chr10	18301724	.	GA	G	1861.88	PASS	AB=0.766;AC=15;AF=0.268;AN=56;BaseQRankSum=8.758;DP=624;FS=3.912;HRun=1;HaplotypeScore=125.6171;InbreedingCoeff=-0.1458;MQ=57.71;MQ0=58;MQRankSum=-4.499;QD=11.94;ReadPosRankSum=0.808;VQSLOD=2.3406;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:31,0:29:99:187,0,175	1/1:0,2:2:6.02:84,6,0	0/0:65,0:10:25.88:0,26,334	0/0:122,1:29:47.08:0,47,540	0/1:6,8:13:9.78:120,0,10	0/0:16,0:15:26.77:0,27,360	0/0:27,0:24:65.99:0,66,987	0/0:24,0:18:42.52:0,43,553	0/1:9,0:8:71.13:113,0,71	0/1:5,2:5:57.61:70,0,58	0/1:7,0:6:34.72:35,0,37	0/0:20,0:20:36.77:0,37,441	0/1:2,7:9:9.85:231,0,10	0/1:5,3:8:36.75:56,0,37	0/0:23,0:23:59.48:0,59,880	0/0:20,0:20:45.83:0,46,602	0/1:10,7:16:99:255,0,134	0/0:20,0:17:35.99:0,36,453	0/0:27,0:13:32.32:0,32,484	0/0:7,0:7:21.07:0,21,334	0/0:76,0:72:99:0,145,2195	0/0:5,0:4:8.94:0,9,103	0/1:5,4:7:58.29:68,0,58	0/1:7,16:22:3.20:566,0,3	0/0:12,0:12:33.46:0,33,461	0/1:6,2:5:68.55:69,0,128	0/1:6,2:7:69.19:136,0,69	0/1:2,2:4:32.95:33,0,57
chr10	18301762	.	G	GTGTGC	11291.58	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=14.793;DP=668;FS=5.831;HRun=0;HaplotypeScore=178.6134;InbreedingCoeff=0.9902;MQ=72.21;MQ0=12;MQRankSum=-6.220;QD=43.43;ReadPosRankSum=2.665;VQSLOD=4.4573;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:44,1:43:99:2074,120,0	1/1:3,0:3:9.03:160,9,0	0/0:33,0:28:72.15:0,72,1329	0/0:63,0:47:94.83:0,95,1364	1/1:28,0:28:63.20:1043,63,0	0/0:19,0:19:48.16:0,48,912	0/0:34,0:33:96.30:0,96,1843	0/0:24,0:22:63.21:0,63,1214	1/1:13,0:13:36.12:669,36,0	1/1:16,0:16:48.13:898,48,0	1/1:11,2:13:27.08:422,27,0	0/0:32,0:32:90.22:0,90,1712	1/1:20,1:21:51.17:791,51,0	1/1:17,2:20:51.16:865,51,0	0/0:34,0:34:96.32:0,96,1877	0/0:27,0:27:72.18:0,72,1420	1/1:14,1:15:42.14:668,42,0	0/0:22,0:20:48.14:0,48,896	0/0:18,0:17:48.16:0,48,938	0/0:18,0:18:54.17:0,54,988	0/0:51,0:50:99:0,114,2149	0/0:8,0:8:21.07:0,21,411	1/1:21,0:20:54.65:952,55,0	1/1:27,2:29:74.83:1190,75,0	0/0:25,0:25:75.23:0,75,1475	1/1:15,0:14:39.13:646,39,0	1/1:12,1:14:39.02:631,39,0	1/1:7,0:7:18.06:283,18,0
chr10	18301969	.	TG	T	5036.88	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-7.555;DP=632;FS=12.011;HRun=1;HaplotypeScore=97.5911;InbreedingCoeff=0.9995;MQ=68.07;MQ0=2;MQRankSum=1.771;QD=32.08;ReadPosRankSum=3.214;VQSLOD=3.4207;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,102,1570	0/0:10,0:10:30.03:0,30,282	0/0:13,0:13:35.98:0,36,413	0/0:18,0:17:35.72:0,36,437	0/0:34,0:34:86.49:0,86,760	1/1:0,25:26:66.20:892,66,0	1/1:0,15:15:39.13:537,39,0	0/0:34,0:34:98.04:0,98,680	0/0:21,0:21:60.14:0,60,817	0/0:19,0:19:55.86:0,56,509	0/0:29,0:29:76.15:0,76,772	1/1:1,30:31:69.23:952,69,0	0/0:27,0:27:74.98:0,75,688	0/0:27,0:27:78.08:0,78,732	1/1:0,22:24:54.13:710,54,0	1/1:0,15:15:33.11:458,33,0	0/0:31,0:31:75.04:0,75,687	1/1:0,14:14:33.11:456,33,0	0/0:15,0:14:34.38:0,34,267	0/0:33,0:32:92.25:0,92,617	0/0:13,0:13:26.43:0,26,186	1/1:0,16:16:42.14:580,42,0	0/0:20,0:20:56.80:0,57,484	0/0:15,0:16:44.89:0,45,397	1/1:0,16:16:33.11:453,33,0	0/0:30,0:30:84.88:0,85,767	0/0:23,0:22:53.54:0,54,493	0/0:27,0:27:66.08:0,66,639
chr10	18301970	.	G	GA	6540.36	PASS	AB=0.864;AC=25;AF=0.446;AN=56;BaseQRankSum=-15.591;DP=635;FS=1.927;HRun=10;HaplotypeScore=93.1580;InbreedingCoeff=0.7945;MQ=67.38;MQ0=2;MQRankSum=-0.799;QD=19.12;ReadPosRankSum=0.975;VQSLOD=5.3298;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:98.87:0,99,813	1/1:0,8:10:29.74:284,30,0	0/0:13,0:13:29.65:0,30,223	0/0:16,0:16:15.83:0,16,164	1/1:9,24:34:60.01:612,60,0	0/0:26,0:26:48.84:0,49,151	0/0:15,0:15:23.25:0,23,77	0/1:31,0:31:20.20:20,0,42	0/0:20,2:22:18.84:0,19,350	1/1:7,12:20:35.88:352,36,0	0/1:9,20:29:12.21:478,0,12	0/0:31,0:31:50.20:0,50,154	1/1:5,22:27:44.36:660,44,0	1/1:2,25:27:72.18:768,72,0	0/0:25,0:25:39.95:0,40,123	0/0:15,0:15:24.32:0,24,75	1/1:3,28:32:66:686,66,0	0/0:14,0:14:24.42:0,24,75	0/1:15,0:14:5.38:74,0,5	0/0:33,0:32:43.31:0,43,112	0/0:15,0:15:10.31:0,10,26	0/0:16,0:16:30.68:0,31,93	1/1:4,16:21:44.95:460,45,0	1/1:4,12:16:36.09:384,36,0	0/0:16,0:16:24.24:0,24,74	1/1:8,20:29:62.66:617,63,0	1/1:3,21:24:48.51:497,49,0	1/1:1,26:27:41.52:647,42,0
chr10	18301977	.	AAAAC	A	3042.20	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-6.329;DP=626;FS=0.950;HRun=0;HaplotypeScore=139.1826;InbreedingCoeff=0.9788;MQ=69.98;MQ0=2;MQRankSum=-3.107;QD=33.80;ReadPosRankSum=-2.019;VQSLOD=3.1332;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,102,2466	0/0:10,0:10:30.10:0,30,525	0/0:13,0:13:36.07:0,36,724	0/0:17,0:16:8.28:0,8,494	0/0:33,0:33:75.10:0,75,1256	0/0:25,0:25:72.23:0,72,1079	0/0:17,0:17:45.15:0,45,696	1/1:12,19:31:85.28:1204,85,0	0/0:23,0:23:63.18:0,63,1335	0/0:17,0:17:19.38:0,19,579	0/0:29,0:29:75.39:0,75,1189	0/0:28,0:28:75.25:0,75,1193	0/0:26,0:26:72.21:0,72,1240	0/0:26,0:26:75.26:0,75,1323	0/0:23,0:23:60.17:0,60,897	0/0:14,0:14:33.11:0,33,521	0/0:35,0:35:81.18:0,81,1354	0/0:16,0:16:42.03:0,42,547	1/1:2,11:12:32.91:443,33,0	1/1:5,26:30:75.10:1205,75,0	1/1:0,15:15:24:350,24,0	0/0:17,0:17:45.14:0,45,660	0/0:20,0:20:51.10:0,51,850	0/0:16,0:16:42.11:0,42,692	0/0:14,0:14:33.10:0,33,476	0/0:30,0:30:89.72:0,90,1405	0/0:25,0:25:55.51:0,56,992	0/0:28,0:28:69.21:0,69,1204
chr10	18302660	.	A	ACC	18264.44	PASS	AB=0.740;AC=25;AF=0.446;AN=56;BaseQRankSum=2.410;DP=1298;DS;FS=140.027;HRun=0;HaplotypeScore=266.0703;InbreedingCoeff=-0.8043;MQ=59.36;MQ0=0;MQRankSum=-15.520;QD=14.97;ReadPosRankSum=-8.753;VQSLOD=1.1929;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:26,6:33:99:210,0,1178	0/1:13,5:19:99:224,0,582	0/0:18,0:18:51.16:0,51,792	0/0:32,0:31:90.27:0,90,1392	0/1:34,28:65:99:540,0,1398	0/1:33,11:44:99:567,0,1341	0/1:31,23:60:99:951,0,1288	0/1:61,5:61:12.37:12,0,2205	0/1:33,6:39:99:296,0,1400	0/1:43,15:58:99:836,0,1690	0/1:16,18:37:99:797,0,688	0/1:34,13:47:99:478,0,1474	0/1:40,21:62:99:1232,0,1381	0/1:30,13:43:99:554,0,1182	0/1:45,23:70:99:944,0,1864	0/1:34,17:56:99:887,0,1409	0/1:42,10:53:99:458,0,1779	0/1:18,2:21:64.51:65,0,767	0/1:23,19:38:99:522,0,885	0/1:24,43:69:99:2117,0,985	0/1:34,18:54:99:538,0,1479	0/1:23,29:54:99:1293,0,974	0/1:26,23:51:99:996,0,1091	0/0:25,3:28:17.53:0,18,1162	0/1:26,25:52:99:1308,0,1113	0/1:27,16:46:99:906,0,1023	0/1:35,20:55:99:1106,0,1317	0/1:11,9:22:99:426,0,469
chr10	18302845	.	CAACA	C	8775.58	PASS	AB=1.000;AC=25;AF=0.446;AN=56;BaseQRankSum=12.913;DP=715;FS=1.902;HRun=0;HaplotypeScore=136.6584;InbreedingCoeff=0.9441;MQ=60.66;MQ0=0;MQRankSum=-1.041;QD=29.85;ReadPosRankSum=2.631;VQSLOD=4.9914;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:60.18:0,60,1342	1/1:1,11:12:20.94:339,21,0	0/1:16,0:15:3.75:4,0,554	0/0:18,0:18:43.68:0,44,782	1/1:5,22:27:48.16:736,48,0	0/0:32,0:32:78.26:0,78,1794	0/0:21,0:21:57.19:0,57,1271	0/0:27,0:35:51.17:0,51,789	0/0:35,0:35:93.32:0,93,2129	1/1:4,17:21:48.15:751,48,0	1/1:4,19:23:42.14:634,42,0	0/0:25,0:25:57.19:0,57,1124	1/1:3,25:28:54.18:906,54,0	1/1:7,18:25:45.15:753,45,0	0/0:44,0:44:99:0,111,2630	0/0:35,0:35:87.30:0,87,1929	1/1:5,17:22:36.12:604,36,0	0/0:27,0:27:32.31:0,32,1499	0/0:8,0:19:42.14:0,42,692	0/0:8,0:27:57.19:0,57,918	0/0:10,0:25:36.11:0,36,594	0/0:29,0:29:75.26:0,75,1726	1/1:2,19:21:42.14:691,42,0	1/1:1,34:34:72.25:1208,72,0	0/0:24,0:24:63.22:0,63,1440	1/1:7,24:31:69.23:1091,69,0	1/1:2,24:26:51.11:856,51,0	1/1:1,6:7:12.04:201,12,0
chr10	18303224	.	AC	A	1361.42	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=7.897;DP=621;FS=3.962;HRun=2;HaplotypeScore=57.9881;InbreedingCoeff=0.8029;MQ=90.30;MQ0=0;MQRankSum=-4.515;QD=27.78;ReadPosRankSum=1.751;VQSLOD=3.2847;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,24:26:69.22:896,69,0	0/1:7,0:7:8.49:8,0,249	0/0:26,0:26:75.24:0,75,1085	0/0:22,0:22:54.17:0,54,759	0/0:28,0:28:84.26:0,84,1201	0/0:33,0:33:96.33:0,96,1436	0/0:15,0:15:45.15:0,45,675	0/0:33,0:33:96.33:0,96,1438	1/1:0,16:16:45.15:584,45,0	0/0:30,0:30:90.30:0,90,1330	0/0:22,0:22:63.21:0,63,944	0/0:18,0:18:54.17:0,54,789	0/0:20,0:20:60.20:0,60,898	0/0:31,0:31:93.30:0,93,1369	0/0:31,0:31:93.32:0,93,1393	0/0:21,0:21:63.21:0,63,944	0/0:24,0:24:69.23:0,69,1034	0/0:10,0:10:30.10:0,30,450	0/0:16,0:16:48.16:0,48,718	0/0:20,0:20:60.17:0,60,874	0/0:23,0:23:69.22:0,69,1013	0/0:23,0:23:66.21:0,66,970	0/0:22,0:22:63.21:0,63,943	0/0:15,0:15:45.15:0,45,672	0/0:28,0:28:84.28:0,84,1259	0/0:17,0:17:51.16:0,51,747	0/0:32,0:32:96.33:0,96,1439	0/0:12,0:12:36.12:0,36,539
chr10	18304476	.	CAGA	C	12907.01	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=15.212;DP=684;FS=3.769;HRun=0;HaplotypeScore=99.8889;InbreedingCoeff=0.9916;MQ=84.59;MQ0=0;MQRankSum=-5.719;QD=43.02;ReadPosRankSum=1.576;VQSLOD=6.1900;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,144,3037	0/0:8,0:8:24.07:0,24,510	0/0:17,0:17:45.15:0,45,954	0/0:26,0:26:69.11:0,69,1463	0/0:29,0:29:87.30:0,87,2003	1/1:0,33:33:81.28:1379,81,0	1/1:0,21:21:54.18:920,54,0	1/1:1,34:35:99:1659,102,0	0/0:17,0:17:51.18:0,51,1168	0/0:27,0:27:81.26:0,81,1759	0/0:24,0:24:72.24:0,72,1619	1/1:1,18:19:42.14:716,42,0	0/0:25,0:25:72.23:0,72,1615	0/0:18,0:18:51.17:0,51,1176	1/1:0,25:25:63.22:1074,63,0	1/1:1,30:31:38.69:1420,39,0	0/0:31,0:31:90.31:0,90,2069	1/1:0,19:19:51.17:869,51,0	1/1:1,15:16:45.15:744,45,0	1/1:2,23:25:66.22:1053,66,0	1/1:0,33:33:81.23:1334,81,0	1/1:1,17:18:36.12:614,36,0	0/0:17,0:17:51.15:0,51,1093	0/0:26,0:26:72.25:0,72,1639	1/1:0,25:25:66.23:1125,66,0	0/0:29,0:29:87.29:0,87,1966	0/0:38,0:38:99:0,114,2626	0/0:4,0:4:9.03:0,9,208
chr10	18306499	.	AG	A	15065.49	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=4.103;DP=640;FS=2.844;HRun=6;HaplotypeScore=70.6672;InbreedingCoeff=0.9939;MQ=74.03;MQ0=0;MQRankSum=-3.352;QD=27.19;ReadPosRankSum=2.645;VQSLOD=5.5119;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:87.28:0,87,1142	1/1:1,6:7:15.04:161,15,0	0/0:15,0:13:21.12:0,21,319	0/0:18,0:17:26.53:0,27,322	1/1:2,24:26:66.11:696,66,0	1/1:0,31:31:72.18:773,72,0	1/1:3,17:20:42.10:451,42,0	1/1:1,34:35:99:1050,99,0	0/0:20,0:20:60.19:0,60,779	1/1:1,24:25:72.18:774,72,0	1/1:4,22:26:60.11:632,60,0	1/1:2,14:16:36.09:387,36,0	1/1:1,19:20:48.12:516,48,0	1/1:0,28:28:75.19:806,75,0	1/1:0,26:26:72.18:773,72,0	1/1:0,16:16:30.08:322,30,0	1/1:4,18:22:49:515,49,0	1/1:3,22:25:60.15:645,60,0	1/1:0,16:16:48.11:508,48,0	1/1:2,23:25:69.17:742,69,0	1/1:0,13:13:36.09:387,36,0	1/1:0,20:20:54.10:568,54,0	1/1:2,33:35:81.16:858,81,0	1/1:3,25:28:66.16:709,66,0	1/1:0,18:18:45.11:484,45,0	1/1:0,28:28:78.19:838,78,0	1/1:0,31:31:90.20:955,90,0	1/1:0,17:17:48.12:516,48,0
chr10	18308363	.	C	CGGG	449.51	PASS	AC=12;AF=0.261;AN=46;BaseQRankSum=-1.054;DP=99;FS=20.452;HRun=7;HaplotypeScore=20.5354;InbreedingCoeff=0.5982;MQ=82.95;MQ0=0;MQRankSum=-0.761;QD=24.97;ReadPosRankSum=-1.552;VQSLOD=-0.5308;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:24.05:0,24,310	./.	0/0:6,0:4:5.15:0,5,79	0/0:4,0:3:6.02:0,6,77	1/1:2,2:4:6.01:89,6,0	0/0:4,0:4:12.04:0,12,164	0/0:4,0:4:9.03:0,9,123	0/0:17,0:17:42.12:0,42,559	0/0:4,0:4:12.04:0,12,163	1/1:1,1:1:3.01:58,3,0	./.	0/0:4,0:4:12.04:0,12,156	1/1:1,1:2:5.98:82,6,0	1/1:0,1:1:3.01:62,3,0	0/0:2,0:2:3.01:0,3,41	0/0:5,0:5:9.02:0,9,122	./.	0/0:2,0:2:5.98:0,6,61	0/0:1,0:1:3.01:0,3,41	0/0:3,0:3:9.03:0,9,123	0/0:3,0:3:6.01:0,6,82	0/0:2,0:2:6.02:0,6,82	0/0:3,0:3:0:0,0,0	./.	0/0:4,0:4:12.04:0,12,164	1/1:0,2:3:9:112,9,0	1/1:1,5:6:8.99:187,9,0	./.
chr10	18310059	.	TGACA	T	12984.20	PASS	AB=0.725;AC=51;AF=0.911;AN=56;BaseQRankSum=1.424;DP=874;FS=7.240;HRun=0;HaplotypeScore=168.0203;InbreedingCoeff=0.6032;MQ=65.68;MQ0=2;MQRankSum=2.564;QD=16.15;ReadPosRankSum=3.577;VQSLOD=4.0995;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:37,0:58:36.01:323,36,0	1/1:11,7:18:21.07:328,21,0	0/0:35,0:27:5.91:0,6,38	0/0:35,0:29:6.02:0,6,133	1/1:12,17:29:33.11:515,33,0	1/1:5,9:14:21.03:301,21,0	0/1:23,14:37:7.70:479,0,8	1/1:30,0:37:4.36:31,4,0	1/1:14,0:30:30.03:280,30,0	1/1:9,16:25:45.14:680,45,0	1/1:15,5:20:12.04:187,12,0	1/1:17,18:35:36.05:531,36,0	1/1:20,21:41:53.95:836,54,0	1/1:15,23:38:63.21:983,63,0	1/1:23,27:50:69.19:1050,69,0	1/1:24,25:49:54.18:843,54,0	1/1:10,18:28:42.10:655,42,0	1/1:16,21:37:57.08:889,57,0	1/1:6,0:11:11.99:105,12,0	1/1:15,0:24:21.02:195,21,0	1/1:33,0:42:9.01:84,9,0	1/1:11,15:26:36.08:535,36,0	1/1:11,8:19:18.49:255,18,0	1/1:19,29:48:75.25:1170,75,0	1/1:15,11:26:27.09:421,27,0	1/1:17,12:29:36.02:466,36,0	1/1:10,13:23:33.11:515,33,0	1/1:3,7:10:21.07:328,21,0
chr10	18310238	.	AAACAACAAC	A	5228.23	PASS	AB=0.655;AC=20;AF=0.357;AN=56;BaseQRankSum=-1.083;DP=738;FS=5.210;HRun=0;HaplotypeScore=191.7603;InbreedingCoeff=0.7101;MQ=62.51;MQ0=10;MQRankSum=-5.340;QD=15.65;ReadPosRankSum=0.449;VQSLOD=3.5805;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:29:39.55:0,40,895	0/0:5,0:5:6.49:0,6,220	0/0:41,0:28:8.91:0,9,133	0/0:35,0:19:13.43:0,13,125	0/0:21,0:20:32.90:0,33,536	1/1:4,19:23:27.09:727,27,0	1/1:8,17:25:3.01:83,3,0	0/1:19,0:30:17.01:17,0,160	0/0:22,0:29:60.09:0,60,1375	0/0:23,0:22:35.97:0,36,605	0/0:11,0:11:12.46:0,12,224	1/1:12,21:33:14.97:418,15,0	0/0:42,0:42:42.44:0,42,1264	0/0:27,0:27:35.85:0,36,825	1/1:7,34:41:45.15:1251,45,0	1/1:11,39:50:44.73:1254,45,0	0/0:23,0:23:16.51:0,17,232	1/1:9,12:20:9.03:208,9,0	0/0:13,0:21:5.87:0,6,106	0/1:6,0:22:31.36:31,0,98	1/1:13,0:35:3.74:8,4,0	1/1:9,17:26:38.96:813,39,0	0/0:18,0:18:32.30:0,32,681	0/0:28,0:29:18.96:0,19,475	1/1:10,18:28:15.05:417,15,0	0/0:20,0:20:40.88:0,41,928	0/0:27,0:27:28.48:0,28,590	0/0:3,0:3:3.01:0,3,34
chr10	18310264	.	A	ACAACAG	5894.33	PASS	AB=0.672;AC=21;AF=0.375;AN=56;BaseQRankSum=-0.525;DP=782;FS=6.814;HRun=0;HaplotypeScore=174.0618;InbreedingCoeff=0.4432;MQ=55.13;MQ0=15;MQRankSum=1.037;QD=15.68;ReadPosRankSum=2.183;VQSLOD=3.9774;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:38.79:0,39,646	1/1:0,5:5:8.90:242,9,0	0/0:23,0:11:23.96:0,24,264	0/1:27,0:13:14.59:15,0,60	1/1:26,0:25:41.56:388,42,0	0/0:29,0:29:56.87:0,57,586	0/0:24,0:24:24:0,24,211	0/0:29,0:27:59.28:0,59,484	0/1:26,0:26:60.41:60,0,273	1/1:5,18:26:36.78:636,37,0	1/1:7,14:24:32.58:370,33,0	0/0:27,0:27:32.92:0,33,361	0/1:5,34:43:16.99:1199,0,17	0/1:9,28:38:32.32:715,0,32	0/0:41,0:41:66.13:0,66,832	0/0:44,0:44:59.97:0,60,791	0/1:6,24:33:58.61:193,0,59	0/0:27,0:26:23.65:0,24,307	0/0:21,0:21:52.03:0,52,427	0/0:21,0:21:46.45:0,46,413	0/0:32,0:30:29.84:0,30,295	0/0:31,0:31:71.96:0,72,687	1/1:24,0:24:45.73:428,46,0	0/1:6,28:37:54.10:259,0,54	0/0:25,0:25:32.96:0,33,324	1/1:5,19:26:47.73:900,48,0	0/1:5,22:29:7.72:396,0,8	1/1:1,8:8:3.01:94,3,0
chr10	18317298	.	T	TGTAA	12341.72	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-17.153;DP=746;FS=2.280;HRun=0;HaplotypeScore=145.6531;InbreedingCoeff=0.9992;MQ=84.83;MQ0=1;MQRankSum=-4.741;QD=57.14;ReadPosRankSum=1.429;VQSLOD=6.3600;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:93.32:0,93,1691	0/0:10,0:10:30.10:0,30,552	0/0:29,0:29:63.45:0,63,1218	0/0:20,0:20:48.16:0,48,862	0/0:19,0:19:51.17:0,51,938	1/1:1,12:14:33.11:804,33,0	1/1:4,27:32:75.26:1894,75,0	0/0:33,0:33:93.30:0,93,1647	0/0:25,0:25:63.16:0,63,1084	0/0:30,0:30:87.29:0,87,1540	0/0:19,0:19:51.17:0,51,927	1/1:7,39:47:99:2503,102,0	0/0:42,0:42:99:0,120,2163	0/0:44,0:44:99:0,120,2160	1/1:5,29:34:75.21:1754,75,0	1/1:3,37:39:99:2628,102,0	0/0:15,0:15:45.14:0,45,798	1/1:0,9:8:21.07:554,21,0	0/0:21,0:21:57.15:0,57,985	0/0:20,0:20:54.19:0,54,993	0/0:41,0:41:99:0,120,2152	1/1:2,18:22:54.14:1218,54,0	0/0:21,0:21:57.20:0,57,1048	0/0:27,0:27:78.25:0,78,1403	1/1:3,15:18:39.13:988,39,0	0/0:24,0:24:63.22:0,63,1148	0/0:42,0:40:99:0,123,2133	0/0:16,0:16:48.16:0,48,883
chr10	18317452	.	CAT	C	2269.78	PASS	AB=0.868;AC=16;AF=0.286;AN=56;BaseQRankSum=4.856;DP=682;FS=0.450;HRun=0;HaplotypeScore=156.0277;InbreedingCoeff=0.6453;MQ=51.15;MQ0=32;MQRankSum=1.858;QD=10.41;ReadPosRankSum=4.169;VQSLOD=2.9281;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:61.39:0,61,661	0/1:9,0:9:9.72:10,0,149	0/0:21,1:11:26.57:0,27,290	0/0:8,0:5:14.89:0,15,151	0/0:30,0:28:65.40:0,65,672	1/1:13,6:14:12.61:158,13,0	0/1:17,8:22:2.46:294,0,2	0/0:43,0:41:99:0,106,1633	0/1:17,0:17:39.82:87,0,40	0/0:22,0:22:56.81:0,57,741	0/0:23,0:21:18.03:0,18,207	1/1:5,32:32:42.10:550,42,0	0/0:25,0:25:23.82:0,24,290	0/0:28,0:27:74.46:0,74,857	1/1:21,12:22:3.67:319,4,0	1/1:4,24:24:28.62:353,29,0	0/0:29,0:30:17.17:0,17,493	0/1:9,6:12:60.85:159,0,61	0/0:18,0:15:41.61:0,42,586	0/0:30,0:26:27.09:0,27,256	0/0:35,1:33:64.66:0,65,1051	1/1:2,13:10:11.75:156,12,0	0/0:30,1:30:33.14:0,33,479	0/0:27,0:26:23.50:0,23,337	1/1:14,6:20:34.59:371,35,0	0/0:18,0:17:29.05:0,29,529	0/0:37,0:37:38.49:0,38,633	0/0:9,0:9:23.82:0,24,222
chr10	18317456	.	CAT	C	2670.59	PASS	AB=0.959;AC=22;AF=0.393;AN=56;BaseQRankSum=2.719;DP=700;FS=0.852;HRun=0;HaplotypeScore=160.0177;InbreedingCoeff=0.2090;MQ=51.19;MQ0=32;MQRankSum=-0.225;QD=6.30;ReadPosRankSum=1.029;VQSLOD=3.2935;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:27:62.59:63,0,236	0/1:10,0:10:7.82:8,0,99	0/0:19,0:8:12.84:0,13,177	0/0:5,0:2:6.02:0,6,84	0/0:30,1:29:48.87:0,49,454	0/1:21,0:16:12.10:211,0,12	1/1:26,0:23:5.46:323,5,0	0/1:39,6:42:99:167,0,1257	0/1:18,0:18:35.02:111,0,35	0/0:22,0:22:56.35:0,56,513	0/0:24,1:23:22.09:0,22,164	1/1:38,1:34:45.05:571,45,0	0/0:25,0:25:23.76:0,24,215	0/0:33,1:33:10:0,10,603	1/1:34,0:23:5.01:320,5,0	1/1:25,1:22:28.62:353,29,0	0/1:30,1:31:20.67:21,0,274	0/1:16,0:13:43.43:155,0,43	0/1:13,3:14:10.76:11,0,366	0/0:30,0:26:1.85:0,2,132	0/1:34,3:34:0.70:1,0,772	1/1:17,0:12:10.76:164,11,0	0/0:31,1:31:8.51:0,9,322	0/0:27,0:26:23.44:0,23,209	1/1:21,0:21:34.28:368,34,0	0/0:17,0:16:10.14:0,10,291	0/1:39,1:40:4.08:4,0,299	0/0:9,0:9:23.58:0,24,153
chr10	18317458	.	T	TACAC	5734.57	PASS	AB=0.901;AC=36;AF=0.643;AN=56;BaseQRankSum=-1.131;DP=734;FS=2.687;HRun=0;HaplotypeScore=184.5302;InbreedingCoeff=-0.2360;MQ=51.35;MQ0=33;MQRankSum=3.511;QD=8.11;ReadPosRankSum=-3.452;VQSLOD=3.6267;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:28:61.93:242,0,62	0/1:4,5:10:7.45:86,0,7	0/0:21,0:10:13.75:0,14,114	0/0:6,0:2:5.99:0,6,50	1/1:29,1:30:38.77:370,39,0	0/1:21,0:16:15.52:35,0,16	1/1:25,0:22:17.47:204,17,0	0/1:46,0:44:99:132,0,319	0/1:19,0:19:14.33:64,0,14	0/1:6,18:27:32.04:441,0,32	1/1:5,22:27:5.99:145,6,0	0/1:40,0:35:22.58:23,0,73	1/1:6,20:29:7.67:214,8,0	1/1:32,2:34:51.15:582,51,0	0/1:35,0:24:1.47:124,0,1	0/1:26,0:23:20.08:20,0,31	0/1:7,23:33:24.55:410,0,25	0/1:15,0:12:39.31:99,0,39	0/1:19,0:17:12.46:104,0,12	0/1:24,0:24:3.38:89,0,3	0/1:36,0:35:39.97:171,0,40	0/1:17,0:12:7.01:53,0,7	1/1:30,1:30:68.84:583,69,0	1/1:4,21:28:11.24:288,11,0	1/1:21,0:21:0.02:99,0,0	1/1:16,0:16:35.76:397,36,0	1/1:7,36:46:13.33:622,13,0	0/1:8,0:9:0.40:137,0,0
chr10	18317462	.	T	TACATACACAC	5412.59	PASS	AB=1.000;AC=33;AF=0.589;AN=56;BaseQRankSum=-6.491;DP=738;FS=6.566;HRun=0;HaplotypeScore=239.5141;InbreedingCoeff=-0.5377;MQ=51.28;MQ0=34;MQRankSum=-0.317;QD=7.40;ReadPosRankSum=-3.014;VQSLOD=2.6202;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:29:32.16:32,0,310	0/1:11,0:11:52.89:86,0,53	0/1:19,0:10:4.80:5,0,231	0/0:7,0:4:9.03:0,9,157	0/1:32,0:30:99:171,0,159	0/1:20,0:15:50.32:50,0,145	0/1:24,0:21:58.31:342,0,58	1/1:48,0:45:68.73:847,69,0	0/1:21,0:21:31.85:32,0,197	0/1:30,0:30:96.38:388,0,96	0/1:29,0:27:33.27:55,0,33	0/1:41,0:36:99:128,0,416	0/1:28,0:28:71.41:74,0,71	0/1:31,0:30:92.27:291,0,92	0/1:36,0:25:99:200,0,179	0/1:26,0:22:99:119,0,229	0/1:33,0:33:41.40:174,0,41	0/1:15,0:12:99:188,0,118	1/1:22,0:19:38.80:427,39,0	1/1:7,18:29:5.89:78,6,0	1/1:36,0:33:34:630,34,0	0/1:17,0:12:84.66:95,0,85	1/1:31,0:30:5.93:249,6,0	0/1:25,0:24:10.01:75,0,10	0/1:18,0:17:99:235,0,151	1/1:3,0:19:4.52:141,5,0	0/1:46,0:46:10.35:292,0,10	0/1:9,0:9:2.58:8,0,3
chr10	18317585	.	AC	A	3098.21	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=7.324;DP=549;FS=0.000;HRun=1;HaplotypeScore=60.5771;InbreedingCoeff=0.9991;MQ=75.10;MQ0=0;MQRankSum=-1.761;QD=36.03;ReadPosRankSum=-2.511;VQSLOD=2.7375;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:84.26:0,84,1204	0/0:12,0:12:36.10:0,36,507	0/0:21,0:21:63.06:0,63,803	0/0:17,0:16:33.95:0,34,407	0/0:18,0:18:54.17:0,54,771	0/0:21,0:21:60.19:0,60,854	0/0:16,0:16:45.15:0,45,658	1/1:0,24:24:72.10:878,72,0	0/0:23,0:23:66.21:0,66,941	0/0:21,0:21:63.17:0,63,897	0/0:25,0:25:75.24:0,75,1076	0/0:22,0:22:63.21:0,63,920	0/0:26,0:26:78.25:0,78,1119	0/0:21,0:21:63.18:0,63,870	0/0:20,0:20:60.09:0,60,812	0/0:11,0:11:33.10:0,33,462	0/0:14,0:15:37.68:0,38,529	0/0:13,0:13:32.78:0,33,440	1/1:1,21:22:63.15:811,63,0	1/1:2,27:29:87.27:1185,87,0	1/1:3,8:11:32.99:385,33,0	0/0:19,0:19:57.07:0,57,783	0/0:16,0:16:48.15:0,48,683	0/0:9,0:9:24.08:0,24,347	0/0:31,0:31:93.27:0,93,1296	0/0:20,0:20:60.06:0,60,807	0/0:23,0:23:69.20:0,69,965	0/0:14,0:14:42.14:0,42,614
chr10	18317664	.	CT	C	2983.27	PASS	AB=0.902;AC=18;AF=0.321;AN=56;BaseQRankSum=3.647;DP=573;FS=3.770;HRun=11;HaplotypeScore=68.9657;InbreedingCoeff=0.8108;MQ=75.80;MQ0=0;MQRankSum=-0.845;QD=15.70;ReadPosRankSum=2.508;VQSLOD=4.5580;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:20:40.44:0,40,254	0/0:14,1:15:17.46:0,17,391	0/1:11,0:13:16.77:17,0,98	0/1:12,1:13:4.08:4,0,93	0/0:32,1:34:71.42:0,71,942	1/1:2,27:29:74.91:616,75,0	1/1:3,12:15:29.96:246,30,0	0/0:4,0:27:61.96:0,62,326	0/0:3,0:20:45.64:0,46,239	0/0:27,1:28:56.55:0,57,803	0/0:21,2:23:23.01:0,23,568	1/1:1,13:14:38.95:320,39,0	0/0:23,1:24:57.14:0,57,607	0/0:19,2:21:1.84:0,2,423	1/1:1,18:19:50.94:419,51,0	1/1:0,18:19:46.98:375,47,0	0/0:21,0:21:57.09:0,57,583	1/1:2,11:13:9.04:179,9,0	0/0:4,0:14:37.16:0,37,195	0/0:11,0:26:62.83:0,63,332	0/0:1,0:5:11.36:0,11,57	1/1:3,22:25:62.92:517,63,0	0/0:23,0:23:63.16:0,63,671	0/0:12,0:12:33.08:0,33,352	1/1:10,19:29:61.89:493,62,0	0/0:24,0:24:51.11:0,51,531	0/0:33,3:36:19.38:0,19,802	0/0:8,0:8:21.05:0,21,224
chr10	18318004	.	C	CTATG	7690.26	PASS	AB=0.676;AC=24;AF=0.462;AN=52;BaseQRankSum=-7.652;DP=779;FS=2.638;HRun=0;HaplotypeScore=129.1728;InbreedingCoeff=0.6468;MQ=66.62;MQ0=3;MQRankSum=1.883;QD=17.72;ReadPosRankSum=-2.685;VQSLOD=4.1915;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:36:12.03:207,12,0	0/0:20,0:20:30.09:0,30,441	./.	./.	0/0:18,0:22:21.02:0,21,243	1/1:12,15:28:39.13:901,39,0	1/1:16,8:24:9.03:211,9,0	1/1:49,0:49:23.61:243,24,0	1/1:13,14:27:21.07:493,21,0	0/0:32,0:32:42.13:0,42,612	0/0:27,0:27:39.11:0,39,578	1/1:26,20:47:54.19:1261,54,0	0/0:25,0:25:42.13:0,42,627	0/0:26,0:26:24.07:0,24,349	1/1:22,17:39:42.14:986,42,0	0/1:12,15:29:56.64:668,0,57	0/0:33,0:33:39.13:0,39,603	0/1:7,6:12:7.94:199,0,8	1/1:22,1:27:21.05:351,21,0	0/1:16,1:29:19.17:407,0,19	1/1:21,4:26:8.06:147,8,0	1/1:10,19:30:4.41:1080,4,0	0/0:15,0:15:27.09:0,27,417	0/0:25,0:25:42.14:0,42,648	0/1:16,12:28:19.28:536,0,19	0/0:29,0:30:48.15:0,48,703	0/0:43,0:43:78.19:0,78,1154	0/0:10,0:10:9.03:0,9,139
chr10	18318324	.	TA	T	15077.64	PASS	AB=0.941;AC=38;AF=0.679;AN=56;BaseQRankSum=12.812;DP=674;FS=7.797;HRun=2;HaplotypeScore=77.1714;InbreedingCoeff=0.8376;MQ=75.75;MQ0=1;MQRankSum=-0.232;QD=32.08;ReadPosRankSum=0.628;VQSLOD=4.3247;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,25:25:69.22:895,69,0	1/1:0,12:12:30.10:389,30,0	0/0:19,0:15:29.82:0,30,358	0/1:17,0:16:17.34:17,0,293	1/1:1,23:24:66.21:854,66,0	0/0:40,0:40:99:0,111,1594	0/0:21,0:21:61.69:0,62,873	1/1:0,42:42:99:1431,120,0	1/1:1,31:32:78.25:1008,78,0	1/1:0,32:32:96.29:1229,96,0	1/1:4,20:24:72.15:909,72,0	0/0:16,0:16:48.16:0,48,717	1/1:0,27:27:63.08:817,63,0	1/1:0,19:19:45.15:579,45,0	0/0:33,0:33:99:0,99,1439	0/0:20,0:20:60.19:0,60,880	1/1:1,25:26:63.20:815,63,0	0/1:13,2:15:35.93:36,0,443	1/1:0,15:15:45.15:580,45,0	1/1:1,27:28:81.07:996,81,0	1/1:0,25:25:69.17:871,69,0	0/0:28,0:28:81.27:0,81,1209	1/1:0,25:25:66.21:851,66,0	1/1:0,18:18:42.12:545,42,0	0/0:27,0:27:81.25:0,81,1172	1/1:0,24:24:69.22:893,69,0	1/1:0,29:29:72.07:932,72,0	1/1:0,11:11:33.11:428,33,0
chr10	18318901	.	GGA	G	5676.82	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=9.321;DP=456;FS=14.913;HRun=0;HaplotypeScore=79.5947;InbreedingCoeff=0.9828;MQ=83.23;MQ0=4;MQRankSum=-0.629;QD=30.20;ReadPosRankSum=4.327;VQSLOD=5.6125;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:32.97:0,33,309	1/1:0,9:9:15.05:205,15,0	0/0:42,0:29:18.79:0,19,614	0/0:26,0:14:27.22:0,27,288	1/1:1,20:21:60.11:767,60,0	0/0:20,0:20:60.18:0,60,962	0/0:11,0:11:33.07:0,33,484	0/0:20,0:20:50.89:0,51,519	0/0:11,0:11:33.11:0,33,563	1/1:1,12:13:36.07:427,36,0	1/1:1,19:20:45.08:578,45,0	0/0:17,0:17:47.74:0,48,741	1/1:0,12:12:33.11:452,33,0	1/1:0,12:12:21.07:287,21,0	0/0:16,0:16:45.07:0,45,646	0/0:13,0:13:39.12:0,39,622	1/1:1,20:21:42.14:575,42,0	0/0:18,0:18:54.18:0,54,893	0/0:8,0:8:24.07:0,24,357	0/0:12,0:12:36.11:0,36,587	0/0:3,0:3:9.01:0,9,102	0/0:10,0:10:24.08:0,24,410	1/1:1,16:17:45:595,45,0	1/1:1,18:19:30.07:392,30,0	0/0:20,0:20:57.18:0,57,927	1/1:0,21:21:62.33:742,62,0	1/1:0,17:17:36.12:493,36,0	1/1:0,6:6:12.04:164,12,0
chr10	18320271	.	GTCTAGTC	G	2224.15	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.332;DP=574;FS=7.441;HRun=0;HaplotypeScore=127.8109;InbreedingCoeff=0.9963;MQ=81.96;MQ0=0;MQRankSum=-8.764;QD=67.40;ReadPosRankSum=1.206;VQSLOD=3.6379;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,7:7:21.07:586,21,0	0/0:8,0:8:24.08:0,24,1006	0/0:19,0:19:57.09:0,57,2106	0/0:17,0:17:44.52:0,45,1499	0/0:32,0:32:96.32:0,96,3703	0/0:22,0:22:66.23:0,66,2644	0/0:12,0:12:36.12:0,36,1453	0/0:22,0:22:66.23:0,66,2699	1/1:0,26:26:63.22:1759,63,0	0/0:19,0:19:57.20:0,57,2290	0/0:35,0:35:99:0,105,4364	0/0:27,0:27:81.26:0,81,3234	0/0:21,0:21:63.20:0,63,2494	0/0:23,0:23:69.24:0,69,2549	0/0:26,0:26:78.25:0,78,3142	0/0:22,0:22:66.23:0,66,2771	0/0:15,0:15:42.14:0,42,1761	0/0:10,0:10:30.10:0,30,1196	0/0:20,0:20:60.21:0,60,2340	0/0:19,0:19:57.20:0,57,2306	0/0:17,0:17:51.18:0,51,2094	0/0:29,0:29:87.29:0,87,3252	0/0:29,0:29:87.30:0,87,3632	0/0:13,0:13:39.13:0,39,1589	0/0:16,0:16:48.16:0,48,1775	0/0:23,0:23:69.22:0,69,2610	0/0:34,0:34:99:0,102,4081	0/0:11,0:10:33.07:0,33,1178
chr10	18320812	.	CACTGTGGCTGCT	C	5435.72	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=10.316;DP=767;FS=12.233;HRun=0;HaplotypeScore=268.0930;InbreedingCoeff=0.9978;MQ=85.14;MQ0=0;MQRankSum=-11.829;QD=82.36;ReadPosRankSum=3.614;VQSLOD=3.4472;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,28:34:75.17:2494,75,0	0/0:8,0:8:21.07:0,21,1275	0/0:24,0:24:69.22:0,69,3045	0/0:29,0:29:78.27:0,78,3908	0/0:28,0:28:78.25:0,78,3420	0/0:32,0:32:81.26:0,81,3876	0/0:21,0:21:60.21:0,60,3486	0/0:25,0:25:66.23:0,66,3608	1/1:1,31:32:81.28:2942,81,0	0/0:32,0:32:93.28:0,93,4423	0/0:20,0:20:48.16:0,48,2141	0/0:33,0:33:84.29:0,84,4684	0/0:24,0:24:69.22:0,69,3951	0/0:42,0:42:99:0,120,7249	0/0:38,0:38:99:0,108,6109	0/0:42,0:42:99:0,120,6859	0/0:26,0:26:75.24:0,75,4014	0/0:19,0:19:51.13:0,51,2919	0/0:28,0:28:72.25:0,72,3660	0/0:27,0:27:75.26:0,75,3439	0/0:30,0:30:84.27:0,84,3738	0/0:25,0:25:63.21:0,63,2458	0/0:24,0:24:66.23:0,66,2482	0/0:27,0:27:81.28:0,81,4560	0/0:26,0:26:69.24:0,69,3153	0/0:30,0:30:78.27:0,78,3573	0/0:30,0:30:87.28:0,87,4677	0/0:11,0:11:33.11:0,33,1578
chr10	18320889	.	A	AT	8702.56	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-16.746;DP=730;FS=7.063;HRun=1;HaplotypeScore=72.4704;InbreedingCoeff=0.9996;MQ=79.24;MQ0=0;MQRankSum=0.180;QD=39.56;ReadPosRankSum=2.369;VQSLOD=5.5233;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:66.13:0,66,817	0/0:9,0:9:24.06:0,24,287	0/0:17,0:17:51.12:0,51,601	0/0:18,0:18:45.14:0,45,565	0/0:26,0:26:75.24:0,75,972	1/1:0,26:26:66.69:990,67,0	1/1:2,17:19:45.15:674,45,0	0/0:48,0:48:99:0,135,1705	0/0:29,0:29:67.84:0,68,785	0/0:36,0:36:99:0,105,1339	0/0:33,0:33:96.30:0,96,1233	1/1:0,38:38:99:1572,105,0	0/0:24,0:24:72.23:0,72,930	0/0:26,0:26:75.23:0,75,960	1/1:0,26:26:78.26:1169,78,0	1/1:5,29:34:42.33:1130,42,0	0/0:14,0:14:42.14:0,42,544	1/1:1,19:20:54.18:809,54,0	0/0:16,0:16:41.78:0,42,501	0/0:30,0:30:81.24:0,81,1018	0/0:23,0:23:69.21:0,69,882	1/1:0,33:33:93.27:1369,93,0	0/0:25,0:25:75.24:0,75,970	0/0:24,0:24:72.22:0,72,921	1/1:0,24:24:66.22:989,66,0	0/0:33,0:33:99:0,99,1257	0/0:34,0:34:99:0,102,1295	0/0:18,0:18:51.16:0,51,649
chr10	18324336	.	CTT	C	1513.83	PASS	AB=0.707;AC=15;AF=0.268;AN=56;BaseQRankSum=-0.893;DP=412;FS=3.083;HRun=15;HaplotypeScore=63.2079;InbreedingCoeff=0.7264;MQ=66.65;MQ0=2;MQRankSum=-1.175;QD=10.81;ReadPosRankSum=5.439;VQSLOD=2.3655;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:21:39.05:0,39,382	0/0:5,0:5:15.03:0,15,185	0/1:23,0:15:2.34:2,0,54	0/0:16,0:5:9.02:0,9,97	0/0:15,0:16:26.53:0,27,285	1/1:7,12:20:29.70:308,30,0	1/1:2,9:11:20.95:185,21,0	0/0:8,0:20:41.77:0,42,411	0/0:7,0:12:17.98:0,18,157	0/0:15,0:16:33.09:0,33,418	0/0:14,0:16:30.09:0,30,395	1/1:6,5:12:16.36:155,16,0	0/0:3,0:4:5.51:0,6,49	0/0:12,0:12:33.07:0,33,427	0/1:5,10:15:2.27:229,0,2	0/1:6,6:13:11.06:193,0,11	0/0:22,0:23:42.06:0,42,603	1/1:2,10:12:26.95:238,27,0	0/0:9,0:19:35.96:0,36,331	0/0:8,0:22:50.87:0,51,482	0/0:7,0:7:6.48:0,6,60	1/1:2,2:4:5.97:53,6,0	0/0:8,0:8:20.56:0,21,253	0/0:7,0:7:18.05:0,18,228	1/1:13,11:26:34.84:335,35,0	0/0:15,1:19:14.10:0,14,357	0/0:21,0:22:44.60:0,45,530	0/0:7,0:7:18.03:0,18,225
chr10	18326091	.	CT	C	17893.77	PASS	AB=0.833;AC=54;AF=0.964;AN=56;BaseQRankSum=-2.368;DP=557;FS=6.081;HRun=4;HaplotypeScore=102.3900;InbreedingCoeff=-0.0204;MQ=61.95;MQ0=0;MQRankSum=-2.397;QD=32.13;ReadPosRankSum=1.659;VQSLOD=4.8658;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,14:16:42.09:486,42,0	1/1:1,12:13:36.11:427,36,0	0/1:2,2:4:32.96:62,0,33	0/1:7,0:7:16.99:17,0,21	1/1:7,29:36:84.24:995,84,0	1/1:2,25:27:78.23:923,78,0	1/1:3,16:19:57.17:673,57,0	1/1:4,17:21:51.16:611,51,0	1/1:0,25:25:75.23:898,75,0	1/1:2,28:30:90.27:1070,90,0	1/1:3,19:22:54.15:636,54,0	1/1:2,14:16:48.12:554,48,0	1/1:1,21:22:66.19:780,66,0	1/1:2,16:18:54.17:646,54,0	1/1:3,20:23:66.18:770,66,0	1/1:3,19:22:63.18:743,63,0	1/1:3,17:20:47.63:574,48,0	1/1:2,24:26:75.21:884,75,0	1/1:1,18:19:54.16:647,54,0	1/1:3,21:24:69.19:804,69,0	1/1:0,13:13:39.12:468,39,0	1/1:2,23:25:72.22:862,72,0	1/1:4,20:24:63.18:742,63,0	1/1:1,12:13:30.09:358,30,0	1/1:1,14:15:42.13:503,42,0	1/1:4,18:22:57.17:682,57,0	1/1:5,24:29:84.20:968,84,0	1/1:2,4:4:9.03:107,9,0
chr10	18326495	.	ACAGG	A	6452.18	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=12.468;DP=609;FS=1.699;HRun=0;HaplotypeScore=105.0822;InbreedingCoeff=0.9978;MQ=79.68;MQ0=0;MQRankSum=-2.636;QD=40.84;ReadPosRankSum=3.657;VQSLOD=5.3433;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,138,3539	0/0:10,0:10:27.09:0,27,690	0/0:19,0:19:51.18:0,51,1305	0/0:25,0:24:41.76:0,42,1258	0/0:18,0:18:51.17:0,51,1314	1/1:0,22:21:54.18:986,54,0	1/1:1,21:22:57.20:1059,57,0	0/0:21,0:21:45.15:0,45,1176	0/0:17,0:17:39.13:0,39,1009	0/0:19,0:19:54.18:0,54,1362	0/0:14,0:14:39.13:0,39,1038	1/1:3,17:20:45.15:839,45,0	0/0:24,0:24:66.18:0,66,1699	0/0:27,0:27:78.16:0,78,1853	1/1:1,14:15:36.12:672,36,0	1/1:3,17:20:51.17:936,51,0	0/0:42,0:42:99:0,117,3094	1/1:1,24:25:57.20:1064,57,0	0/0:19,0:19:54.19:0,54,1369	0/0:10,0:10:27.08:0,27,616	0/0:48,0:48:99:0,138,3589	1/1:1,10:11:18.06:336,18,0	0/0:15,0:15:33.10:0,33,780	0/0:26,0:26:75.24:0,75,1898	1/1:1,22:23:30.10:560,30,0	0/0:20,0:20:57.18:0,57,1411	0/0:20,0:20:57.20:0,57,1457	0/0:8,0:8:24.08:0,24,640
chr10	18326659	.	TGCACGCGCATGCGCGC	T	4480.46	PASS	AB=0.875;AC=22;AF=0.440;AN=50;BaseQRankSum=4.555;DP=433;FS=8.070;HRun=0;HaplotypeScore=171.1742;InbreedingCoeff=0.5738;MQ=69.49;MQ0=2;MQRankSum=-6.649;QD=25.90;ReadPosRankSum=3.060;VQSLOD=2.7701;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:0,26:26:0.94:0,1,3	./.	0/1:12,0:8:80.92:81,0,137	0/1:14,0:8:26.87:27,0,124	./.	0/0:16,0:15:14.88:0,15,111	0/0:31,0:31:14.06:0,14,211	0/0:28,0:28:59.11:0,59,1306	1/1:2,9:11:6.49:274,6,0	1/1:2,13:14:23.44:902,23,0	./.	0/0:18,0:18:36.05:0,36,517	1/1:2,14:16:15.52:619,16,0	1/1:3,21:24:9.03:322,9,0	0/0:10,0:10:21.04:0,21,255	0/1:13,0:13:18.36:18,0,378	1/1:1,12:13:11.96:433,12,0	0/0:21,0:21:54.59:0,55,861	0/0:14,0:14:42.11:0,42,1011	0/0:12,0:12:33.06:0,33,1051	0/0:19,0:19:5.99:0,6,50	0/0:11,0:11:2.99:0,3,24	0/1:0,8:8:0:0,0,0	1/1:5,16:21:3.48:78,3,0	0/0:15,0:15:30.03:0,30,486	1/1:0,11:11:30.03:1155,30,0	1/1:4,8:12:9.43:294,9,0	1/1:0,3:3:6.02:278,6,0
chr10	18326661	.	CACGCGCAT	C	1782.16	PASS	AB=1.000;AC=21;AF=0.420;AN=50;BaseQRankSum=7.096;DP=412;FS=4.232;HRun=0;HaplotypeScore=136.8716;InbreedingCoeff=0.6064;MQ=66.48;MQ0=4;MQRankSum=-6.112;QD=11.07;ReadPosRankSum=3.759;VQSLOD=2.5275;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:0.47:0,0,1	./.	0/1:11,0:7:10.25:10,0,160	0/0:12,0:6:4.34:0,4,152	./.	0/0:16,0:15:14.93:0,15,115	0/0:30,0:30:14.97:0,15,197	0/1:25,0:25:18.80:19,0,459	1/1:10,0:9:5.76:135,6,0	1/1:14,1:14:23.27:397,23,0	./.	0/0:16,0:16:41.99:0,42,538	1/1:14,1:15:13.17:267,13,0	1/1:21,2:23:8.39:109,8,0	0/0:11,0:11:21.04:0,21,291	0/0:13,0:13:23.18:0,23,371	1/1:13,0:12:7.23:200,7,0	0/0:21,0:21:57.11:0,57,885	0/0:14,0:14:19.85:0,20,325	0/0:12,0:12:18.44:0,18,378	0/0:18,0:18:5.99:0,6,50	0/0:10,0:10:2.99:0,3,24	0/1:8,0:8:0:0,0,0	1/1:16,2:18:2.37:9,2,0	0/0:15,0:15:30.03:0,30,486	1/1:11,0:11:30.03:545,30,0	1/1:9,0:9:4.62:134,5,0	1/1:3,0:3:6.02:128,6,0
chr10	18326667	.	CAT	C	1748.16	PASS	AB=0.992;AC=33;AF=0.717;AN=46;BaseQRankSum=0.105;DP=396;FS=37.286;HRun=0;HaplotypeScore=117.0603;InbreedingCoeff=0.1849;MQ=59.12;MQ0=9;MQRankSum=-2.213;QD=5.87;ReadPosRankSum=5.874;VQSLOD=1.5144;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:29:0.02:0,0,0	./.	0/1:8,0:3:2.44:2,0,43	0/1:11,0:5:2.35:2,0,54	./.	0/0:13,0:12:2.80:0,3,13	1/1:27,0:27:5.75:34,6,0	1/1:18,2:20:40.84:445,41,0	1/1:10,0:9:5.10:24,5,0	1/1:15,0:14:14.93:76,15,0	./.	1/1:9,0:9:6.48:80,6,0	1/1:17,0:17:10.74:54,11,0	0/1:28,0:28:0.88:8,0,1	0/1:10,0:10:0.83:31,0,1	0/1:12,1:13:5.73:79,0,6	0/1:14,0:12:8.55:29,0,9	1/1:19,0:19:17.63:173,18,0	1/1:0,10:10:27.92:337,28,0	1/1:7,1:8:21.05:274,21,0	./.	./.	0/1:9,0:8:0:0,0,0	0/0:20,0:19:0.89:0,1,2	1/1:13,0:13:6.08:73,6,0	1/1:15,0:15:21.65:102,22,0	0/1:9,0:9:13.57:15,0,14	1/1:4,0:3:5.64:26,6,0
chr10	18326668	.	ATG	A	2450.54	PASS	AB=0.861;AC=41;AF=0.891;AN=46;BaseQRankSum=-0.592;DP=396;FS=7.482;HRun=0;HaplotypeScore=114.9253;InbreedingCoeff=0.2414;MQ=59.12;MQ0=9;MQRankSum=-1.602;QD=7.40;ReadPosRankSum=2.312;VQSLOD=2.8184;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:29:0.04:0,0,1	./.	0/1:7,0:3:12.29:12,0,19	0/1:10,0:5:9.98:22,0,10	./.	0/1:0,13:12:0:0,0,0	1/1:0,27:27:5.76:76,6,0	1/1:20,0:20:13.66:145,14,0	1/1:10,0:9:5.49:39,5,0	1/1:15,0:14:20.25:112,20,0	./.	1/1:6,3:9:20.87:240,21,0	1/1:17,0:17:12.82:94,13,0	1/1:28,0:28:7.95:47,8,0	1/1:8,2:10:17.94:179,18,0	1/1:9,4:13:23.63:226,24,0	1/1:14,0:12:8.77:51,9,0	1/1:17,2:19:50.79:550,51,0	1/1:10,0:10:25.32:168,25,0	1/1:8,0:8:18.81:117,19,0	./.	./.	0/1:9,0:8:0:0,0,0	1/1:20,0:19:2.04:6,2,0	1/1:8,5:13:20.88:250,21,0	1/1:15,0:15:24.54:130,25,0	1/1:9,0:9:8.08:49,8,0	1/1:4,0:3:5.78:32,6,0
chr10	18326674	.	GCGCGCGCGCACA	G	1722.62	PASS	AB=1.000;AC=24;AF=0.522;AN=46;BaseQRankSum=8.031;DP=409;FS=9.140;HRun=0;HaplotypeScore=147.9402;InbreedingCoeff=0.4687;MQ=54.55;MQ0=16;MQRankSum=-6.028;QD=9.31;ReadPosRankSum=2.988;VQSLOD=2.0254;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:30:0.94:0,1,2	./.	1/1:7,0:2:3.01:63,3,0	0/1:10,0:4:29.79:41,0,30	./.	./.	0/0:23,0:23:5.73:0,6,83	0/0:20,0:19:37.29:0,37,637	1/1:11,0:10:6.01:116,6,0	1/1:16,0:16:2.84:330,3,0	./.	0/1:9,0:9:13.06:13,0,169	1/1:18,1:18:14.70:241,15,0	1/1:27,2:29:8.25:113,8,0	0/0:9,0:9:11.93:0,12,110	0/1:10,0:10:49.79:50,0,160	1/1:14,0:12:9.03:159,9,0	0/0:21,0:18:37.36:0,37,418	0/0:12,0:11:33.07:0,33,422	0/0:12,0:12:20.94:0,21,470	0/0:21,0:20:2.97:0,3,20	./.	0/1:9,0:8:0:0,0,0	1/1:18,2:19:3.01:34,3,0	0/0:12,0:12:18.04:0,18,256	1/1:16,0:16:9.80:474,10,0	1/1:9,0:9:9.01:141,9,0	1/1:5,0:4:6.91:107,7,0
chr10	18327007	.	CGTGTGT	C	1934.57	PASS	AC=14;AF=0.280;AN=50;BaseQRankSum=6.498;DP=499;FS=3.357;HRun=0;HaplotypeScore=98.6216;InbreedingCoeff=0.8704;MQ=65.42;MQ0=12;MQRankSum=-7.932;QD=16.82;ReadPosRankSum=0.850;VQSLOD=3.0256;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:21.07:0,21,547	0/0:5,0:5:9.03:0,9,293	./.	./.	0/0:17,0:21:36.10:0,36,931	1/1:11,7:18:15:265,15,0	1/1:8,8:16:3.01:61,3,0	0/0:22,0:22:18.53:0,19,449	0/0:9,0:18:3.01:0,3,79	0/0:20,0:21:30.10:0,30,897	0/0:6,0:10:15.05:0,15,304	1/1:8,5:14:15.05:288,15,0	0/0:15,0:16:35.26:0,35,958	0/0:18,0:18:30.09:0,30,724	1/1:7,11:19:33.11:633,33,0	1/1:7,5:13:15.05:284,15,0	0/0:25,0:26:38.31:0,38,1133	1/1:10,5:14:12.04:246,12,0	0/0:12,0:17:23.47:0,23,471	0/0:7,0:11:6.02:0,6,168	0/0:19,0:31:9.01:0,9,193	./.	0/0:16,0:16:24.08:0,24,747	0/0:20,0:20:42.13:0,42,1199	1/1:8,9:19:18.06:337,18,0	0/0:17,0:17:24.08:0,24,677	0/0:20,0:21:42.09:0,42,1036	0/0:10,0:11:27.09:0,27,778
chr10	18328771	.	TTCTC	T	5778.55	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=6.404;DP=411;FS=3.681;HRun=0;HaplotypeScore=103.1785;InbreedingCoeff=0.9366;MQ=86.61;MQ0=3;MQRankSum=-9.090;QD=35.89;ReadPosRankSum=2.740;VQSLOD=4.8931;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,14:18:36.08:585,36,0	1/1:0,3:3:6.02:105,6,0	0/0:64,1:36:44.64:0,45,1134	0/0:90,0:54:72.52:0,73,1098	1/1:1,14:15:33.11:572,33,0	0/0:19,0:19:48.16:0,48,1187	0/0:12,0:12:30.10:0,30,753	1/1:10,3:13:20.90:262,21,0	1/1:2,5:7:18.06:315,18,0	1/1:1,8:9:21.07:364,21,0	1/1:1,8:9:21.07:359,21,0	0/0:10,0:10:27.09:0,27,688	1/1:1,7:8:24.04:388,24,0	1/1:2,5:7:15.01:230,15,0	0/0:13,0:13:36.12:0,36,919	0/0:19,0:19:57.20:0,57,1439	1/1:2,7:9:12.02:181,12,0	0/0:10,0:10:27.09:0,27,623	1/1:5,2:7:12.04:201,12,0	1/1:1,7:8:24.08:420,24,0	1/1:1,6:7:9.03:158,9,0	0/0:4,0:4:12.04:0,12,306	1/1:0,8:8:15.05:262,15,0	1/1:1,10:11:18.06:315,18,0	0/0:7,0:7:21.07:0,21,533	1/1:1,9:10:30.03:484,30,0	1/1:1,9:10:27.09:473,27,0	1/1:0,2:2:6.02:105,6,0
chr10	18328780	.	T	TC	1266.94	PASS	AB=0.970;AC=25;AF=0.446;AN=56;BaseQRankSum=8.070;DP=410;FS=1.157;HRun=1;HaplotypeScore=110.4085;InbreedingCoeff=0.1988;MQ=86.69;MQ0=3;MQRankSum=-7.733;QD=7.41;ReadPosRankSum=4.076;VQSLOD=0.9781;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:22:45.32:160,0,45	0/1:4,0:4:9.45:9,0,60	0/0:64,0:34:63.64:0,64,928	0/0:83,0:48:60.62:0,61,746	0/1:16,0:16:5.68:119,0,6	0/0:17,0:17:48.16:0,48,623	0/0:11,0:11:33.06:0,33,410	1/1:5,4:9:22.64:246,23,0	0/1:7,1:8:49.06:51,0,49	0/1:10,0:10:42.67:76,0,43	1/1:8,1:9:15.71:92,16,0	0/0:10,0:10:27.09:0,27,351	1/1:7,1:8:19.39:104,19,0	1/1:5,1:6:11.52:70,12,0	0/0:13,0:13:39.13:0,39,506	0/0:19,0:19:57.14:0,57,721	0/1:9,1:10:52.20:95,0,52	0/0:9,0:9:27.03:0,27,330	0/1:6,1:7:52.29:52,0,80	1/1:8,0:8:19.26:74,19,0	0/1:8,0:8:26.84:27,0,60	0/0:4,0:4:12.04:0,12,156	0/1:9,0:9:21.50:21,0,54	0/1:12,0:12:15.61:16,0,87	0/0:8,0:8:24.08:0,24,310	1/1:9,1:10:26.24:166,26,0	0/1:13,0:13:39.79:41,0,40	1/1:2,0:2:5.23:41,5,0
chr10	18328815	.	C	CCG	563.28	PASS	AB=0.600;AC=3;AF=0.054;AN=56;BaseQRankSum=-0.887;DP=296;FS=90.936;HRun=0;HaplotypeScore=75.5186;InbreedingCoeff=0.2869;MQ=76.11;MQ0=1;MQRankSum=-0.996;QD=18.17;ReadPosRankSum=5.487;VQSLOD=-0.0205;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,16:19:7.20:489,7,0	0/0:3,0:3:5.96:0,6,45	0/0:21,0:16:40.15:0,40,317	0/0:18,0:16:19.01:0,19,188	0/0:8,0:8:2.73:0,3,25	0/0:11,0:11:23.84:0,24,195	0/0:12,0:12:35.19:0,35,287	0/0:6,0:6:5.93:0,6,40	0/1:4,6:12:28.15:169,0,28	0/0:6,0:6:14.88:0,15,122	0/0:2,0:2:5.92:0,6,39	0/0:12,0:12:26.95:0,27,226	0/0:9,0:9:17.67:0,18,113	0/0:11,0:11:20.78:0,21,147	0/0:15,0:15:39.44:0,39,337	0/0:17,0:17:37.80:0,38,334	0/0:11,0:11:23.82:0,24,173	0/0:8,0:8:17.97:0,18,151	0/0:5,0:5:11.93:0,12,91	0/0:4,0:4:3.47:0,3,27	0/0:17,0:16:15.47:0,15,130	0/0:4,0:4:12:0,12,105	0/0:6,0:6:3:0,3,27	0/0:15,0:15:27.26:0,27,197	0/0:6,0:6:15.01:0,15,144	0/0:11,0:10:8.96:0,9,70	0/0:21,0:21:53.45:0,53,379	0/0:6,0:6:17.87:0,18,131
chr10	18333110	.	TTTA	T	16938.76	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=16.275;DP=601;FS=0.000;HRun=0;HaplotypeScore=92.6672;InbreedingCoeff=0.9577;MQ=72.80;MQ0=0;MQRankSum=-5.079;QD=41.11;ReadPosRankSum=2.158;VQSLOD=5.7474;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,21:21:54.14:864,54,0	1/1:1,3:4:11.25:156,11,0	0/0:15,0:15:25.86:0,26,872	0/0:13,0:13:0.90:0,1,460	1/1:0,26:26:69.14:1070,69,0	0/0:31,0:31:90.29:0,90,1849	0/0:12,0:12:33.11:0,33,716	1/1:2,22:24:69.18:1013,69,0	1/1:0,18:18:51.17:832,51,0	1/1:1,31:32:93.29:1478,93,0	1/1:1,27:28:81.10:1220,81,0	0/0:15,0:15:45.15:0,45,977	1/1:1,18:19:45.15:733,45,0	1/1:1,41:42:99:1659,102,0	0/0:19,0:19:57.19:0,57,1174	0/0:22,0:22:63.17:0,63,1232	1/1:1,16:17:36.12:596,36,0	0/0:16,0:16:45.08:0,45,831	1/1:1,11:12:36.12:592,36,0	1/1:0,38:38:99:1643,114,0	1/1:0,7:7:18.06:298,18,0	0/0:13,0:13:36.12:0,36,764	1/1:0,18:18:50.89:844,51,0	1/1:1,11:12:27.09:446,27,0	0/0:33,0:33:99:0,99,2122	1/1:0,24:24:69.22:1098,69,0	1/1:0,47:47:93.23:1480,93,0	1/1:1,22:23:57.15:913,57,0
chr10	18335753	.	C	CT	13990.38	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-15.390;DP=608;FS=3.093;HRun=2;HaplotypeScore=51.8493;InbreedingCoeff=0.9984;MQ=83.77;MQ0=0;MQRankSum=-3.478;QD=37.51;ReadPosRankSum=2.180;VQSLOD=5.4460;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,35:36:93.31:1339,93,0	1/1:0,7:7:18.06:259,18,0	0/0:24,0:24:63.17:0,63,748	0/0:17,0:17:48.10:0,48,551	1/1:1,28:29:81.27:1166,81,0	0/0:24,0:24:69.20:0,69,842	0/0:27,0:27:78.19:0,78,917	1/1:3,20:23:57.13:732,57,0	1/1:1,17:18:45.15:648,45,0	1/1:0,25:25:72.19:979,72,0	1/1:2,18:20:51.09:703,51,0	0/0:26,0:26:78.23:0,78,954	1/1:1,13:14:33.11:475,33,0	1/1:0,25:25:69.23:992,69,0	0/0:30,0:30:87.27:0,87,1078	0/0:23,0:23:66.20:0,66,808	1/1:0,24:25:69.15:965,69,0	0/0:24,0:24:69.19:0,69,830	1/1:0,22:22:66.16:886,66,0	1/1:1,16:17:45.08:623,45,0	1/1:0,15:15:39.13:562,39,0	0/0:25,0:25:75.20:0,75,895	1/1:0,20:20:57.19:821,57,0	1/1:1,18:19:54.18:778,54,0	0/0:15,0:15:39.12:0,39,483	1/1:3,19:22:57.15:773,57,0	1/1:0,24:23:66.22:946,66,0	1/1:2,9:12:24.08:346,24,0
chr10	18336628	.	GTAAA	G	10465.40	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=12.295;DP=425;FS=14.289;HRun=0;HaplotypeScore=81.0361;InbreedingCoeff=0.9584;MQ=54.83;MQ0=2;MQRankSum=-1.696;QD=36.72;ReadPosRankSum=1.134;VQSLOD=4.1754;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,18:22:42.14:747,42,0	1/1:1,6:7:15.05:267,15,0	0/0:13,0:11:24.07:0,24,551	0/0:11,0:4:6.02:0,6,154	1/1:6,17:23:51.17:887,51,0	0/0:15,0:15:39.13:0,39,958	0/0:14,0:14:42.12:0,42,986	1/1:4,36:35:75.19:1178,75,0	1/1:3,8:11:21.07:374,21,0	1/1:4,14:18:42.11:691,42,0	1/1:2,11:13:30.10:534,30,0	0/0:16,0:16:45.15:0,45,1160	1/1:2,18:20:45.08:801,45,0	1/1:0,10:10:21.07:374,21,0	0/0:21,0:21:48.16:0,48,1149	0/0:7,0:7:15.05:0,15,381	1/1:0,14:14:27.09:481,27,0	0/0:14,0:14:33.03:0,33,791	1/1:3,11:12:30.10:522,30,0	1/1:2,16:18:51.17:885,51,0	1/1:2,7:9:18.06:321,18,0	0/0:10,0:10:21.07:0,21,542	1/1:3,4:7:5.81:107,6,0	1/1:1,8:9:24.08:427,24,0	0/0:19,0:19:57.20:0,57,1465	1/1:6,18:24:51.14:858,51,0	1/1:3,15:18:39.13:694,39,0	1/1:1,7:8:18.06:320,18,0
chr10	18337197	.	AACACACACACACACACACACACACACACACACAC	A	5983.71	PASS	AB=0.867;AC=12;AF=0.231;AN=52;BaseQRankSum=7.290;DP=489;FS=29.655;HRun=0;HaplotypeScore=354.4931;InbreedingCoeff=0.7033;MQ=65.16;MQ0=13;MQRankSum=-6.688;QD=52.03;ReadPosRankSum=-0.537;VQSLOD=2.0764;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:23:37.94:0,38,2570	0/0:5,0:5:6.02:0,6,603	0/0:33,0:22:5.99:0,6,107	0/0:35,0:22:27.02:0,27,763	0/0:23,0:22:36.11:0,36,3147	1/1:12,5:18:15.05:1138,15,0	./.	0/0:20,0:20:35.33:0,35,1652	0/1:9,0:9:99:118,0,176	0/0:17,0:16:30.10:0,30,2837	0/0:12,0:11:15.05:0,15,1856	1/1:10,7:17:12.04:964,12,0	0/0:12,0:12:18.06:0,18,2004	0/0:11,0:11:20.96:0,21,2875	1/1:15,9:24:15.05:1230,15,0	1/1:13,10:23:15.05:1101,15,0	0/0:18,0:17:21.04:0,21,1495	0/1:7,4:11:13.67:509,0,14	0/0:16,0:16:21.07:0,21,847	0/0:14,0:13:15.05:0,15,715	0/0:33,0:32:21.07:0,21,1431	./.	0/0:12,0:12:9.03:0,9,544	0/0:32,0:32:37.80:0,38,4394	1/1:8,4:13:12.04:924,12,0	0/0:11,0:10:24.08:0,24,1476	0/0:16,0:16:24.08:0,24,1762	0/0:7,0:7:18.06:0,18,1926
chr10	18337233	.	CACACACACACACACACACAGAGAGAGAG	C	4868.92	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=9.033;DP=504;FS=26.028;HRun=0;HaplotypeScore=257.8470;InbreedingCoeff=-0.4047;MQ=42.57;MQ0=39;MQRankSum=-6.249;QD=14.80;ReadPosRankSum=3.040;VQSLOD=2.4600;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:25:60.04:60,0,729	0/0:7,0:6:5.98:0,6,274	0/0:17,0:6:18.06:0,18,727	0/0:27,0:8:24.08:0,24,1028	0/0:25,0:23:24.05:0,24,1348	0/1:14,0:14:99:363,0,699	0/0:7,0:7:9.03:0,9,269	0/1:14,0:14:99:330,0,416	1/1:5,21:26:6.02:435,6,0	0/1:20,0:18:99:595,0,1406	0/0:15,0:14:12.04:0,12,1011	0/1:17,0:17:99:328,0,453	0/0:12,0:11:18.05:0,18,1077	0/0:16,0:16:24.49:0,24,1583	0/1:20,0:19:99:457,0,681	0/1:17,0:16:99:387,0,441	0/1:28,0:27:73.76:74,0,610	0/1:9,0:9:99:178,0,476	0/1:18,0:16:87.78:789,0,88	0/1:25,0:22:74.84:148,0,75	0/0:43,0:40:9.84:0,10,228	0/0:6,0:6:9.03:0,9,369	0/1:11,0:10:75.73:76,0,102	0/1:37,0:36:52.26:52,0,2372	0/1:12,0:12:99:319,0,248	0/1:9,0:9:99:167,0,996	0/1:12,0:11:70.36:70,0,631	0/1:13,0:9:42.76:43,0,771
chr10	18337239	.	CACACACACACACAGAGAGAGAG	C	5007.46	PASS	AB=1.000;AC=25;AF=0.446;AN=56;BaseQRankSum=8.551;DP=512;FS=12.263;HRun=0;HaplotypeScore=231.6192;InbreedingCoeff=-0.2077;MQ=43.99;MQ0=36;MQRankSum=-4.703;QD=12.91;ReadPosRankSum=2.953;VQSLOD=2.5245;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:23:73.13:73,0,101	0/0:6,0:5:3.01:0,3,175	0/0:24,0:10:30.10:0,30,1213	0/0:28,0:14:42.14:0,42,1753	0/0:24,0:22:18.04:0,18,751	0/1:15,0:15:99:151,0,821	0/0:8,0:8:12.04:0,12,394	0/1:15,0:15:70.72:619,0,71	1/1:26,0:26:6.02:332,6,0	0/1:22,0:20:99:758,0,795	0/0:15,0:14:12.04:0,12,697	0/1:19,0:19:99:155,0,697	0/0:12,0:11:1.85:0,2,664	0/1:16,0:16:26.31:26,0,990	0/1:22,0:21:99:241,0,922	0/1:20,0:19:99:211,0,791	0/1:26,0:25:77.57:78,0,359	0/1:9,0:9:94.07:94,0,467	1/1:6,15:19:42.18:1197,42,0	1/1:7,17:21:9.03:353,9,0	1/1:38,0:35:5.82:47,6,0	0/0:7,0:7:12.04:0,12,462	1/1:10,0:9:3.89:86,4,0	0/1:35,0:34:53.49:53,0,1585	0/1:12,0:12:99:152,0,248	0/1:10,0:10:99:259,0,602	0/1:12,0:11:74.38:74,0,360	0/1:11,0:7:48.78:49,0,452
chr10	18337251	.	CAGAGAGAGAG	C	4979.76	PASS	AB=0.643;AC=22;AF=0.407;AN=54;BaseQRankSum=2.079;DP=544;FS=8.757;HRun=0;HaplotypeScore=183.4818;InbreedingCoeff=0.3839;MQ=59.95;MQ0=27;MQRankSum=-1.981;QD=19.01;ReadPosRankSum=1.274;VQSLOD=3.4407;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:3,14:16:3.01:85,3,0	0/0:2,3:5:2.96:0,3,19	0/0:34,0:21:63.22:0,63,2655	0/0:35,0:22:66.23:0,66,2704	0/0:5,16:20:2.92:0,3,17	0/0:18,0:18:48.16:0,48,1459	0/0:12,0:12:24.08:0,24,894	0/1:7,13:20:50.41:990,0,50	1/1:26,0:26:6.02:164,6,0	1/1:7,19:24:50.96:1257,51,0	0/0:9,9:17:8.78:0,9,52	0/0:22,0:22:42.10:0,42,1250	1/1:7,4:10:2.70:88,3,0	0/1:6,9:15:26.59:82,0,27	0/0:25,0:25:51.04:0,51,1600	0/0:26,0:25:51.05:0,51,1536	0/1:12,15:26:24.27:173,0,24	0/0:11,0:11:24.53:0,25,741	1/1:21,0:19:42.04:1077,42,0	1/1:22,0:20:9.03:242,9,0	./.	0/0:13,0:13:30.10:0,30,1187	1/1:2,9:10:2.75:84,3,0	0/1:15,16:32:65.70:66,0,118	0/0:14,0:14:27.55:0,28,682	1/1:6,7:13:17.99:503,18,0	0/1:4,1:10:15.54:82,0,16	0/1:6,3:6:8.37:88,0,8
chr10	18342125	.	CGGGG	C	10253.66	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-2.007;DP=487;FS=9.090;HRun=17;HaplotypeScore=118.3079;InbreedingCoeff=0.6796;MQ=65.76;MQ0=3;MQRankSum=-1.973;QD=25.32;ReadPosRankSum=4.320;VQSLOD=3.1227;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,21:28:53.35:680,53,0	1/1:3,10:13:21.05:266,21,0	0/0:12,0:11:13.29:0,13,195	0/0:12,0:7:12.04:0,12,214	1/1:4,21:25:51:645,51,0	0/0:10,0:10:0:0,0,0	1/1:5,0:6:2.69:22,3,0	1/1:6,10:16:25.60:326,26,0	1/1:3,13:16:35.74:455,36,0	1/1:11,14:25:41.56:530,42,0	1/1:9,16:25:41.74:531,42,0	0/0:6,0:6:0:0,0,0	1/1:4,16:20:44.46:569,44,0	1/1:3,16:19:47.71:604,48,0	0/0:10,0:10:0:0,0,0	0/0:7,0:7:0:0,0,0	1/1:9,38:47:99:1366,108,0	0/0:8,0:8:0:0,0,0	1/1:9,4:13:10.75:139,11,0	1/1:3,19:22:47.88:606,48,0	1/1:7,27:34:59.52:754,60,0	0/0:8,0:8:0:0,0,0	1/1:4,16:20:41.98:527,42,0	1/1:4,17:21:45.10:568,45,0	0/0:9,0:9:0:0,0,0	1/1:3,23:26:65.82:834,66,0	1/1:4,18:22:47.77:603,48,0	1/1:1,6:7:18.04:228,18,0
chr10	18342951	.	CTA	C	15712.87	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=13.737;DP=576;FS=5.328;HRun=0;HaplotypeScore=73.8017;InbreedingCoeff=0.9982;MQ=76.31;MQ0=6;MQRankSum=-2.552;QD=38.89;ReadPosRankSum=1.043;VQSLOD=6.9187;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,25:24:63.21:920,63,0	1/1:1,19:20:48.16:707,48,0	0/0:12,0:13:31.35:0,31,538	0/0:11,0:11:26.86:0,27,344	1/1:0,31:31:90.30:1319,90,0	0/0:21,0:21:63.22:0,63,1180	0/0:13,0:13:36.12:0,36,674	1/1:6,27:33:81.25:1150,81,0	1/1:0,17:17:48.16:707,48,0	1/1:0,23:23:69.20:977,69,0	1/1:0,29:28:81.27:1193,81,0	0/0:17,0:17:48.16:0,48,891	1/1:1,23:24:54.18:794,54,0	1/1:1,24:25:72.24:1060,72,0	0/0:26,0:26:78.27:0,78,1461	0/0:18,0:18:51.17:0,51,955	1/1:0,15:15:36.12:530,36,0	0/0:10,0:10:24.08:0,24,449	1/1:1,13:14:39.13:571,39,0	1/1:1,33:33:87.29:1281,87,0	1/1:0,7:7:21.07:309,21,0	0/0:21,0:21:63.22:0,63,1159	1/1:0,30:30:78.26:1149,78,0	1/1:0,12:11:33.11:486,33,0	0/0:22,0:22:66.23:0,66,1236	1/1:0,27:27:81.22:1149,81,0	1/1:3,27:29:75.25:1101,75,0	1/1:0,7:7:21.07:309,21,0
chr10	18347025	.	AAACAAC	A	6267.94	PASS	AB=0.781;AC=43;AF=0.896;AN=48;BaseQRankSum=3.342;DP=595;FS=12.759;HRun=0;HaplotypeScore=154.6726;InbreedingCoeff=0.5391;MQ=63.69;MQ0=4;MQRankSum=-2.867;QD=14.05;ReadPosRankSum=0.061;VQSLOD=3.1120;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:33.11:0,33,914	1/1:8,0:16:21.54:293,22,0	./.	./.	1/1:15,11:26:17.64:271,18,0	1/1:5,0:18:24.08:335,24,0	./.	./.	0/0:13,0:22:24.07:0,24,549	0/1:18,7:25:1.96:278,0,2	1/1:17,9:26:18.06:320,18,0	1/1:13,0:18:9.03:126,9,0	1/1:12,6:23:34:573,34,0	1/1:5,9:14:21.07:402,21,0	1/1:10,0:27:41.27:585,41,0	1/1:11,0:20:15.05:210,15,0	1/1:9,3:12:1.68:58,2,0	1/1:10,0:13:8.26:121,8,0	1/1:18,2:20:6.02:121,6,0	1/1:16,12:28:26.99:419,27,0	1/1:11,5:16:2.97:20,3,0	1/1:9,0:26:21.07:277,21,0	1/1:11,7:18:11.74:200,12,0	1/1:11,3:14:2.90:60,3,0	1/1:11,0:23:18.06:242,18,0	1/1:11,18:29:48.02:796,48,0	1/1:16,15:31:27.09:503,27,0	1/1:2,0:2:3.01:58,3,0
chr10	18350535	.	GAC	G	15981.68	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=8.162;DP=663;FS=0.331;HRun=0;HaplotypeScore=81.0615;InbreedingCoeff=0.9280;MQ=55.04;MQ0=45;MQRankSum=-0.867;QD=37.34;ReadPosRankSum=0.235;VQSLOD=6.8745;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,38:38:99:1516,99,0	1/1:0,7:7:15.05:230,15,0	0/0:22,0:1:3.01:0,3,49	0/0:25,0:2:6.02:0,6,115	1/1:2,26:28:66.16:960,66,0	0/0:25,0:25:69.22:0,69,1286	0/0:17,0:15:36.12:0,36,653	1/1:2,25:22:51.15:723,51,0	1/1:0,30:30:81.28:1241,81,0	1/1:1,28:29:81.27:1220,81,0	1/1:0,17:17:45.10:662,45,0	0/0:22,0:22:63.20:0,63,1170	1/1:1,21:22:51.17:777,51,0	1/1:0,38:38:96.28:1444,96,0	0/0:28,0:28:81.28:0,81,1550	0/0:20,0:20:60.21:0,60,1159	1/1:2,24:26:17.41:1001,17,0	0/0:33,0:32:90.29:0,90,1691	1/1:1,11:8:21.07:321,21,0	1/1:0,25:24:65.96:959,66,0	1/1:3,33:35:84.29:1286,84,0	0/0:19,0:19:51.16:0,51,946	1/1:2,19:21:54.14:801,54,0	1/1:0,20:20:51.17:780,51,0	0/0:24,0:24:69.24:0,69,1313	1/1:0,24:23:69.23:1054,69,0	1/1:0,26:26:63.08:963,63,0	1/1:0,2:2:3.01:46,3,0
chr10	18352816	.	CAA	C	3049.33	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=11.609;DP=669;FS=1.472;HRun=4;HaplotypeScore=72.1707;InbreedingCoeff=0.9910;MQ=55.49;MQ0=19;MQRankSum=0.214;QD=28.23;ReadPosRankSum=-1.077;VQSLOD=2.3166;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:66.22:0,66,1203	0/0:8,0:8:18.06:0,18,337	0/0:16,0:5:13.86:0,14,213	0/0:23,0:12:33.11:0,33,607	0/0:40,0:38:90.29:0,90,1641	0/0:28,0:28:81.28:0,81,1518	0/0:17,0:17:45.13:0,45,791	1/1:2,26:8:23.96:230,24,0	0/0:27,0:27:78.25:0,78,1394	0/0:23,0:23:66.18:0,66,1171	0/0:29,0:29:51.16:0,51,879	0/0:13,0:12:33.11:0,33,618	0/0:22,0:21:63.21:0,63,1139	0/0:25,0:25:75.26:0,75,1405	0/0:23,0:21:63.21:0,63,1151	0/0:20,0:20:54.19:0,54,1012	0/0:29,0:29:81.28:0,81,1509	0/0:14,0:14:36.04:0,36,591	1/1:1,13:13:36.06:480,36,0	1/1:0,33:33:90.30:1307,90,0	1/1:1,32:32:81.27:1192,81,0	0/0:22,0:22:54.14:0,54,964	0/0:30,0:30:72.25:0,72,1344	0/0:16,0:16:45.14:0,45,786	0/0:25,0:25:54.18:0,54,964	0/0:44,0:43:99:0,117,2083	0/0:35,0:34:96.31:0,96,1729	0/0:9,0:9:27.09:0,27,506
chr10	18353126	.	TA	T	13464.97	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-4.946;DP=667;FS=14.961;HRun=9;HaplotypeScore=70.6565;InbreedingCoeff=0.9823;MQ=58.66;MQ0=7;MQRankSum=-0.413;QD=21.20;ReadPosRankSum=4.927;VQSLOD=4.0868;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,49:53:99:1132,125,0	1/1:0,8:8:18:165,18,0	0/0:18,0:11:15.04:0,15,169	0/0:14,0:9:23.82:0,24,236	1/1:2,32:34:84.04:769,84,0	1/1:5,27:32:66.02:604,66,0	1/1:1,18:19:42.01:384,42,0	1/1:3,18:15:33:298,33,0	1/1:2,20:22:54.02:494,54,0	1/1:2,29:30:80.99:729,81,0	1/1:3,23:26:54.01:494,54,0	1/1:3,21:24:51:467,51,0	1/1:1,16:17:42.02:384,42,0	1/1:1,17:18:48.03:439,48,0	1/1:1,13:14:27:247,27,0	1/1:5,20:25:57.02:522,57,0	1/1:3,19:22:48.02:439,48,0	1/1:3,9:12:24.01:219,24,0	1/1:4,8:8:24.01:220,24,0	1/1:3,29:32:84.04:769,84,0	1/1:1,13:14:33.01:302,33,0	1/1:4,16:20:23.58:387,24,0	1/1:3,24:27:48:439,48,0	1/1:2,14:16:42.01:384,42,0	1/1:3,27:30:69.03:632,69,0	1/1:3,33:36:96.02:870,96,0	1/1:2,39:41:99:933,102,0	1/1:2,27:29:81.04:741,81,0
chr10	18355152	.	GCA	G	1179.01	PASS	AB=0.855;AC=26;AF=0.520;AN=50;BaseQRankSum=6.395;DP=519;FS=2.294;HRun=0;HaplotypeScore=64.2863;InbreedingCoeff=-0.0243;MQ=73.01;MQ0=15;MQRankSum=1.978;QD=3.45;ReadPosRankSum=1.099;VQSLOD=1.8681;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:32,1:32:16.41:16,0,250	./.	./.	./.	0/1:21,2:26:8.52:98,0,9	0/0:18,0:18:9.03:0,9,130	0/0:13,0:12:5:0,5,85	0/0:24,0:23:3.01:0,3,36	0/1:9,5:13:35.61:56,0,36	1/1:16,0:17:1.93:12,2,0	0/1:10,1:11:23.60:24,0,64	0/1:9,2:11:15.37:15,0,147	1/1:1,5:6:15.04:163,15,0	1/1:12,3:15:9.02:98,9,0	0/1:17,4:21:8.58:9,0,265	0/1:16,2:19:49.31:49,0,270	1/1:13,4:19:21.71:173,22,0	0/0:14,0:14:15.43:0,15,165	0/0:17,0:16:6.02:0,6,89	0/1:19,4:22:44.23:44,0,141	0/1:23,0:24:1.29:1,0,200	0/1:21,1:22:5.54:6,0,325	0/1:11,3:13:10.93:86,0,11	0/1:11,10:22:15.06:224,0,15	0/0:10,0:9:18.03:0,18,225	1/1:19,0:19:2.74:12,3,0	1/1:13,6:20:14.60:126,15,0	1/1:2,3:5:14.71:125,15,0
chr10	18355498	.	C	CA	2432.58	PASS	AB=1.000;AC=18;AF=0.321;AN=56;BaseQRankSum=-4.840;DP=426;FS=2.758;HRun=10;HaplotypeScore=62.9265;InbreedingCoeff=0.8233;MQ=73.15;MQ0=0;MQRankSum=-1.079;QD=18.86;ReadPosRankSum=1.145;VQSLOD=4.4948;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:40.39:0,40,380	0/0:6,0:6:14.97:0,15,123	0/1:11,0:10:46.59:58,0,47	0/1:12,0:11:7.12:7,0,45	0/0:24,0:25:55.96:0,56,449	1/1:3,16:19:45.11:480,45,0	1/1:2,7:9:18.05:192,18,0	0/0:30,0:30:59.87:0,60,493	0/0:11,0:11:32.95:0,33,268	0/0:25,0:25:71.92:0,72,591	0/0:10,0:10:26.97:0,27,222	1/1:3,8:11:24.06:256,24,0	0/0:12,0:12:32.96:0,33,271	0/0:18,0:18:50.93:0,51,419	1/1:3,11:14:30.08:320,30,0	1/1:1,7:8:5.50:205,5,0	0/0:15,0:14:38.93:0,39,320	1/1:0,12:12:29.81:320,30,0	0/0:18,0:18:44.92:0,45,367	0/0:19,0:19:52.96:0,53,424	0/0:12,0:12:32.96:0,33,271	1/1:2,18:20:48.12:512,48,0	0/0:12,0:12:20.97:0,21,172	0/0:9,0:9:23.96:0,24,194	1/1:3,10:13:27.07:288,27,0	0/0:24,0:24:65.91:0,66,540	0/0:20,1:21:21.95:0,22,386	0/0:10,0:10:26.37:0,26,221
chr10	18356476	.	GAA	G	3955.02	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=12.087;DP=638;FS=0.403;HRun=5;HaplotypeScore=74.1255;InbreedingCoeff=0.9988;MQ=87.20;MQ0=1;MQRankSum=-0.785;QD=36.96;ReadPosRankSum=-1.160;VQSLOD=3.0363;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:60.19:0,60,1065	0/0:7,0:7:21.07:0,21,380	0/0:31,0:31:72.70:0,73,1195	0/0:18,0:18:49.56:0,50,795	0/0:34,0:34:99:0,99,1810	0/0:21,0:21:60.19:0,60,1038	0/0:21,0:21:60.21:0,60,1092	1/1:0,31:31:87.24:1143,87,0	0/0:24,0:24:72.25:0,72,1303	0/0:28,0:28:84.28:0,84,1509	0/0:19,0:19:51.17:0,51,931	0/0:19,0:19:54.19:0,54,990	0/0:30,0:30:90.31:0,90,1621	0/0:27,0:27:75.25:0,75,1339	0/0:24,0:24:69.24:0,69,1265	0/0:14,0:14:42.14:0,42,764	0/0:16,0:16:45.11:0,45,770	0/0:12,0:12:36.12:0,36,660	1/1:1,17:17:48.16:671,48,0	1/1:1,27:28:75.25:1050,75,0	1/1:1,29:30:78.26:1092,78,0	0/0:30,0:30:87.29:0,87,1560	0/0:20,0:20:60.20:0,60,1072	0/0:33,0:33:93.32:0,93,1700	0/0:23,0:23:66.22:0,66,1179	0/0:27,0:27:78.27:0,78,1428	0/0:18,0:18:54.17:0,54,955	0/0:15,0:15:45.15:0,45,825
chr10	18357544	.	CA	C	13578.85	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-2.320;DP=650;FS=3.588;HRun=9;HaplotypeScore=90.1886;InbreedingCoeff=0.9860;MQ=75.47;MQ0=1;MQRankSum=-6.505;QD=23.17;ReadPosRankSum=5.240;VQSLOD=5.1895;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,27:30:75.04:686,75,0	1/1:2,10:12:27.01:247,27,0	0/0:35,0:28:25.13:0,25,469	0/0:29,0:21:18.80:0,19,279	1/1:0,38:38:99:989,108,0	1/1:0,23:23:69.04:632,69,0	1/1:1,17:18:36.02:330,36,0	1/1:5,24:29:72.01:653,72,0	1/1:0,20:20:51.03:467,51,0	1/1:2,30:32:90.03:819,90,0	1/1:0,22:22:66.04:604,66,0	1/1:0,13:13:36.02:330,36,0	1/1:3,20:23:60.03:549,60,0	1/1:5,16:21:48.01:439,48,0	1/1:2,11:13:33.02:302,33,0	1/1:2,11:13:33.02:301,33,0	1/1:2,28:30:81.04:741,81,0	1/1:3,10:13:30.01:275,30,0	1/1:5,17:23:53.06:473,53,0	1/1:0,18:18:51.02:466,51,0	1/1:2,13:15:33.02:302,33,0	1/1:3,22:25:34.41:569,34,0	1/1:2,17:19:37.12:377,37,0	1/1:1,31:32:92.92:839,93,0	1/1:2,14:16:42.02:384,42,0	1/1:2,39:41:99:1064,117,0	1/1:8,30:38:66.02:604,66,0	1/1:2,7:9:15.01:137,15,0
chr10	18358198	.	GCAAAAA	G	2559.70	PASS	AB=0.975;AC=18;AF=0.321;AN=56;BaseQRankSum=9.537;DP=400;FS=17.513;HRun=0;HaplotypeScore=107.7084;InbreedingCoeff=-0.2343;MQ=57.05;MQ0=6;MQRankSum=-9.150;QD=10.71;ReadPosRankSum=7.667;VQSLOD=0.3790;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:23:17.06:0,17,141	1/1:3,0:3:9.02:93,9,0	0/0:26,0:5:14.56:0,15,145	0/0:18,0:6:14.70:0,15,167	0/1:27,0:27:99:359,0,198	0/0:15,0:16:24.05:0,24,621	0/0:4,0:4:6.01:0,6,122	0/1:21,0:21:99:101,0,272	1/1:4,0:6:6.84:37,7,0	0/1:21,0:21:99:177,0,223	0/1:22,0:22:99:266,0,148	0/0:9,0:9:27.04:0,27,553	0/1:8,1:9:36.03:209,0,36	0/1:11,1:12:95.09:207,0,95	0/0:8,0:8:12.03:0,12,343	0/0:13,0:13:32.99:0,33,830	0/1:12,0:12:92.06:92,0,120	0/1:13,0:13:11.59:12,0,154	0/1:15,0:15:17.55:18,0,187	0/0:28,0:28:0.12:0,0,212	0/0:3,0:3:5.99:0,6,49	0/0:2,0:2:6.01:0,6,131	0/1:11,1:12:41.98:253,0,42	0/1:11,0:10:46.84:47,0,80	0/0:11,0:11:33.11:0,33,1047	0/1:26,0:26:99:398,0,162	0/1:18,1:19:76.34:331,0,76	0/1:9,0:9:69.19:124,0,69
chr10	18358199	.	CAAAAAA	C	5096.30	PASS	AB=0.702;AC=31;AF=0.554;AN=56;BaseQRankSum=3.662;DP=412;FS=5.469;HRun=19;HaplotypeScore=103.2779;InbreedingCoeff=0.6839;MQ=58.05;MQ0=6;MQRankSum=-6.531;QD=18.27;ReadPosRankSum=3.912;VQSLOD=0.5429;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,0:22:14.74:114,15,0	1/1:0,3:3:9.03:147,9,0	0/0:28,0:6:8.24:0,8,133	0/0:18,0:6:9.03:0,9,147	1/1:10,16:28:44.19:706,44,0	0/0:4,0:17:18.06:0,18,499	0/0:3,0:6:9.03:0,9,242	0/1:17,2:23:63.90:164,0,64	1/1:2,0:6:17.04:85,17,0	1/1:11,9:21:22.25:375,22,0	1/1:5,15:22:34.81:516,35,0	0/0:8,0:8:18.06:0,18,478	1/1:5,4:9:14.83:245,15,0	1/1:7,3:11:17.62:258,18,0	0/0:2,0:10:12.04:0,12,340	0/0:12,0:13:24.08:0,24,656	1/1:8,4:12:11.42:196,11,0	0/0:9,0:17:12.51:0,13,287	0/1:9,1:15:37.32:95,0,37	0/1:11,1:29:2.08:205,0,2	0/0:2,0:3:2.04:0,2,6	0/0:2,0:2:3.01:0,3,92	1/1:5,6:12:23.98:376,24,0	1/1:5,5:10:5.59:98,6,0	0/0:10,0:11:33.11:0,33,936	1/1:9,15:26:47.05:754,47,0	1/1:8,10:19:32.55:516,33,0	1/1:4,5:9:14.69:245,15,0
chr10	18360383	.	TC	T	2414.07	PASS	AB=0.983;AC=17;AF=0.304;AN=56;BaseQRankSum=-1.183;DP=514;FS=22.776;HRun=9;HaplotypeScore=101.5232;InbreedingCoeff=0.8650;MQ=69.73;MQ0=15;MQRankSum=-0.389;QD=13.95;ReadPosRankSum=2.511;VQSLOD=2.1519;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:60.03:0,60,575	0/0:5,0:5:9.03:0,9,103	0/1:57,1:24:14.62:15,0,224	0/0:50,2:14:13.08:0,13,138	0/0:19,0:19:42.06:0,42,450	1/1:11,9:20:57:512,57,0	1/1:4,12:16:45:404,45,0	0/0:19,0:19:17.70:0,18,165	0/0:12,0:12:33.83:0,34,313	0/0:17,0:17:48.13:0,48,541	0/0:27,0:27:66.14:0,66,721	1/1:3,9:12:29.96:265,30,0	0/0:11,0:11:30.02:0,30,297	0/0:10,0:10:30.09:0,30,340	1/1:7,12:19:50.96:455,51,0	1/1:2,2:4:9:81,9,0	0/0:17,0:18:51:0,51,536	1/1:4,7:11:23.61:202,24,0	0/0:18,0:18:27.08:0,27,308	0/0:14,0:14:28.30:0,28,291	0/0:15,0:15:33.04:0,33,344	1/1:3,6:9:23.95:205,24,0	0/0:18,0:18:45.11:0,45,498	0/0:6,0:6:18.05:0,18,203	1/1:11,13:23:53.99:481,54,0	0/0:26,0:26:66.07:0,66,699	0/0:22,0:22:57.11:0,57,600	0/0:4,0:4:3.01:0,3,34
chr10	18360397	.	AGG	A	7191.85	PASS	AB=0.790;AC=40;AF=0.714;AN=56;BaseQRankSum=-1.433;DP=556;FS=1.025;HRun=11;HaplotypeScore=95.4908;InbreedingCoeff=0.7948;MQ=72.53;MQ0=18;MQRankSum=0.417;QD=20.49;ReadPosRankSum=4.967;VQSLOD=4.2705;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:8,1:29:5.09:5,0,58	1/1:2,2:4:3:32,3,0	0/0:68,0:26:19.76:0,20,430	0/0:65,0:18:23.72:0,24,229	1/1:4,14:19:39.08:411,39,0	1/1:6,13:19:36.05:382,36,0	1/1:4,16:20:48.09:500,48,0	0/0:12,0:12:9.03:0,9,127	0/0:4,0:17:29.86:0,30,177	1/1:3,20:23:60.14:638,60,0	1/1:7,23:30:34.04:571,34,0	1/1:0,13:13:30.08:318,30,0	1/1:1,11:12:20.17:222,20,0	1/1:1,9:10:30.08:319,30,0	1/1:4,16:21:48.11:508,48,0	1/1:1,3:4:7.62:92,8,0	1/1:2,25:27:45.11:479,45,0	1/1:1,9:10:27.06:286,27,0	0/0:16,0:16:32.78:0,33,472	0/0:11,0:13:15.03:0,15,189	0/0:12,0:12:25.37:0,25,332	1/1:3,10:13:27.05:285,27,0	1/1:4,15:19:30.06:318,30,0	1/1:1,8:9:21.05:223,21,0	1/1:3,18:21:42.10:445,42,0	1/1:2,21:23:63.13:660,63,0	1/1:0,20:21:39:470,39,0	0/1:4,0:4:14.37:26,0,14
chr10	18360799	.	AAG	A	2360.20	PASS	AB=1.000;AC=51;AF=0.911;AN=56;BaseQRankSum=0.128;DP=345;FS=2.149;HRun=0;HaplotypeScore=61.8853;InbreedingCoeff=0.5374;MQ=57.79;MQ0=2;MQRankSum=-0.902;QD=7.38;ReadPosRankSum=2.564;VQSLOD=3.1091;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:20,1:21:26.94:170,27,0	1/1:7,0:7:15.66:60,16,0	0/0:16,0:10:20.73:0,21,197	0/0:9,0:5:6.91:0,7,95	1/1:14,0:14:25.02:134,25,0	1/1:8,0:8:3.11:52,3,0	1/1:17,0:15:23.05:88,23,0	1/1:19,0:19:43.89:216,44,0	1/1:5,0:5:5.09:19,5,0	1/1:14,0:14:29.94:145,30,0	1/1:26,1:27:47.47:274,47,0	1/1:11,0:10:13.43:51,13,0	1/1:3,0:3:7.69:29,8,0	1/1:9,0:9:10.28:39,10,0	1/1:8,0:8:16.07:92,16,0	1/1:6,0:6:10.39:39,10,0	1/1:24,1:24:20.72:154,21,0	1/1:18,0:17:13.35:76,13,0	0/1:16,0:16:3.74:112,0,4	1/1:8,0:7:12.76:49,13,0	1/1:13,0:13:15.56:59,16,0	1/1:9,1:10:11.54:120,12,0	1/1:9,0:9:13.23:59,13,0	1/1:17,0:17:29.08:122,29,0	1/1:12,0:12:15.93:69,16,0	1/1:10,0:10:8.03:143,8,0	1/1:9,1:10:18.67:106,19,0	1/1:3,0:3:1.22:7,1,0
chr10	18360800	.	AG	A	8159.40	PASS	AB=0.800;AC=52;AF=0.929;AN=56;BaseQRankSum=-4.471;DP=334;FS=2.353;HRun=1;HaplotypeScore=36.1545;InbreedingCoeff=0.4992;MQ=58.07;MQ0=2;MQRankSum=-0.237;QD=25.11;ReadPosRankSum=1.545;VQSLOD=4.7993;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,18:20:30.02:375,30,0	1/1:0,7:7:18.06:249,18,0	0/1:16,0:10:2.28:2,0,140	0/0:9,0:5:6.02:0,6,65	1/1:0,13:13:30:343,30,0	1/1:1,7:8:18.87:288,19,0	1/1:0,17:15:27.09:372,27,0	1/1:0,18:18:51.11:639,51,0	1/1:0,5:5:6.02:83,6,0	1/1:0,14:14:36.03:423,36,0	1/1:2,23:25:67.53:889,68,0	1/1:1,10:10:18.06:240,18,0	1/1:0,3:3:9.03:125,9,0	1/1:0,9:9:12.04:167,12,0	1/1:0,8:8:18.06:244,18,0	1/1:0,6:6:12.04:167,12,0	1/1:2,23:24:39.20:558,39,0	1/1:2,16:17:19.75:366,20,0	1/1:2,12:14:26.28:427,26,0	1/1:1,7:7:20.99:248,21,0	1/1:0,13:13:18.06:249,18,0	1/1:2,7:9:21.96:265,22,0	1/1:1,7:8:15.02:187,15,0	1/1:0,16:16:33.07:435,33,0	1/1:0,12:12:18.02:228,18,0	1/1:4,5:9:22.43:276,22,0	1/1:1,9:10:21.06:275,21,0	0/1:1,2:3:1.56:37,0,2
chr10	18360942	.	TGGTTC	T	55.34	PASS	AB=0.861;AC=3;AF=0.056;AN=54;BaseQRankSum=-1.749;DP=226;FS=3.567;HRun=0;HaplotypeScore=43.0025;InbreedingCoeff=-0.0944;MQ=50.11;MQ0=16;MQRankSum=0.906;QD=1.91;ReadPosRankSum=-3.793;VQSLOD=0.1500;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:6:9.02:0,9,132	0/0:3,0:3:9:0,9,170	0/0:16,0:3:2.35:0,2,9	0/0:10,0:6:5.28:0,5,23	0/0:21,0:19:51.04:0,51,871	0/0:16,0:14:25.36:0,25,337	0/0:7,0:7:20.70:0,21,303	0/1:7,6:11:99:113,0,312	./.	0/0:9,0:8:24.05:0,24,452	0/0:4,0:3:5.96:0,6,102	0/1:7,0:7:26.59:27,0,43	0/0:3,0:3:9.02:0,9,169	0/0:3,0:2:3.01:0,3,66	0/0:5,0:4:7.84:0,8,111	0/0:5,0:4:3.01:0,3,49	0/0:10,0:8:17.86:0,18,296	0/0:10,0:10:18.95:0,19,299	0/0:7,0:4:11.53:0,12,233	0/0:5,0:4:12.04:0,12,196	0/0:5,0:3:6.02:0,6,137	0/0:6,0:6:14.69:0,15,155	0/0:3,0:3:2.22:0,2,66	0/1:8,0:9:10.28:10,0,26	0/0:10,0:9:18.06:0,18,259	0/0:11,0:10:27.09:0,27,546	0/0:13,0:12:17.64:0,18,191	0/0:4,0:2:6.02:0,6,98
chr10	18362528	.	TTA	T	207.07	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=4.294;DP=187;FS=1.632;HRun=0;HaplotypeScore=25.9398;InbreedingCoeff=0.3717;MQ=85.98;MQ0=2;MQRankSum=1.413;QD=11.50;ReadPosRankSum=0.756;VQSLOD=3.0296;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,4:4:12.04:156,12,0	0/0:2,0:2:3.01:0,3,51	0/1:10,0:5:10.45:10,0,79	0/0:22,0:13:11.74:0,12,126	0/0:4,0:4:12.04:0,12,204	0/0:7,0:7:21.07:0,21,357	0/0:4,0:4:12.04:0,12,197	0/0:23,0:23:51.17:0,51,826	1/1:0,4:4:12.04:156,12,0	0/0:2,0:2:6.02:0,6,95	0/0:3,0:3:9.03:0,9,153	0/0:1,0:1:3.01:0,3,51	0/0:2,0:2:6.02:0,6,102	0/0:2,0:2:6.02:0,6,102	0/0:1,0:1:3.01:0,3,51	0/0:4,0:4:12.04:0,12,183	0/0:25,0:25:66.20:0,66,1085	0/0:10,0:10:24.08:0,24,406	0/0:3,0:3:9.03:0,9,153	0/0:4,0:4:9.03:0,9,153	0/0:4,0:4:12.04:0,12,190	0/0:1,0:1:3.01:0,3,44	0/0:1,0:1:3.01:0,3,51	0/0:1,0:1:3.01:0,3,51	0/0:6,0:6:18.06:0,18,293	0/0:5,0:5:12.04:0,12,204	0/0:6,0:6:18.06:0,18,290	0/0:24,0:24:60.21:0,60,1020
chr10	18362807	.	C	CG	7671.59	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=16.049;DP=431;FS=10.492;HRun=0;HaplotypeScore=122.6663;InbreedingCoeff=0.9821;MQ=96.99;MQ0=0;MQRankSum=-16.125;QD=30.93;ReadPosRankSum=2.561;VQSLOD=3.6896;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,12:14:35.77:404,36,0	1/1:1,4:5:11.91:143,12,0	0/0:34,0:34:99:0,101,1365	0/0:19,0:19:51.09:0,51,630	1/1:1,7:8:17.75:188,18,0	0/0:29,0:29:84.28:0,84,1174	0/0:8,0:8:24.08:0,24,336	1/1:0,27:27:81.22:959,81,0	1/1:2,22:24:65.82:737,66,0	1/1:0,17:17:45.13:567,45,0	1/1:0,10:10:30.08:329,30,0	0/0:7,0:7:21:0,21,270	1/1:1,20:21:63.16:697,63,0	1/1:1,18:19:57.09:633,57,0	0/0:15,0:15:45.14:0,45,612	0/0:17,0:17:51.17:0,51,708	1/1:1,14:15:38.96:424,39,0	0/0:25,0:25:75.25:0,75,1047	1/1:1,13:14:42.12:495,42,0	1/1:0,5:5:12.03:127,12,0	1/1:0,11:11:23.98:259,24,0	0/0:16,0:16:45.15:0,45,629	1/1:2,6:8:17.88:190,18,0	1/1:1,5:6:11.93:121,12,0	0/0:13,0:13:39.13:0,39,545	1/1:1,14:15:45.06:480,45,0	1/1:1,18:19:50.65:571,51,0	1/1:0,10:10:30.09:347,30,0
chr10	18362810	.	T	TCTA	9432.54	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=16.547;DP=434;FS=8.576;HRun=0;HaplotypeScore=133.6692;InbreedingCoeff=0.9848;MQ=99.63;MQ0=0;MQRankSum=-16.488;QD=38.82;ReadPosRankSum=3.192;VQSLOD=6.0544;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,14:16:45.15:676,45,0	1/1:1,4:5:15.02:197,15,0	0/0:35,0:35:99:0,102,1752	0/0:22,0:22:54.09:0,54,784	1/1:0,7:7:18.06:240,18,0	0/0:30,0:30:90.30:0,90,1614	0/0:8,0:8:24.08:0,24,447	1/1:0,24:24:72.24:1068,72,0	1/1:0,23:23:69.21:951,69,0	1/1:2,15:17:42.07:627,42,0	1/1:0,10:10:30.10:381,30,0	0/0:6,0:6:18.06:0,18,336	1/1:1,19:21:63.19:826,63,0	1/1:0,18:18:54.15:687,54,0	0/0:17,0:17:51.16:0,51,902	0/0:18,0:18:54.15:0,54,932	1/1:1,14:15:37.31:473,37,0	0/0:26,0:26:75.26:0,75,1390	1/1:1,13:14:42.12:618,42,0	1/1:1,5:6:12.04:154,12,0	1/1:2,7:9:23.98:253,24,0	0/0:16,0:16:48.16:0,48,883	1/1:0,6:7:21.07:269,21,0	1/1:1,5:6:12.04:162,12,0	0/0:13,0:13:39.12:0,39,696	1/1:0,14:14:42.14:590,42,0	1/1:1,19:20:59.56:822,60,0	1/1:1,10:11:32.47:439,32,0
chr10	18362812	.	CA	C	2121.68	PASS	AB=0.539;AC=34;AF=0.607;AN=56;BaseQRankSum=16.638;DP=430;FS=8.645;HRun=3;HaplotypeScore=142.6924;InbreedingCoeff=0.8940;MQ=98.58;MQ0=0;MQRankSum=-16.393;QD=8.73;ReadPosRankSum=4.234;VQSLOD=0.6694;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,14:15:36.28:178,36,0	1/1:1,4:5:11.56:57,12,0	0/0:36,0:36:99:0,104,1439	0/0:19,0:19:54.09:0,54,665	1/1:0,7:7:16.62:69,17,0	0/0:29,0:29:84.28:0,84,1210	0/0:8,0:8:24.08:0,24,346	1/1:0,24:24:64.04:284,64,0	1/1:0,23:23:49.97:220,50,0	1/1:1,15:16:38.71:202,39,0	1/1:0,10:10:23.81:82,24,0	0/0:6,0:6:18.06:0,18,259	1/1:1,20:21:45.70:192,46,0	1/1:0,18:18:35.92:137,36,0	0/0:17,0:17:48.16:0,48,691	0/0:16,0:16:48.16:0,48,691	1/1:2,14:16:27.45:138,27,0	0/0:26,0:26:75.22:0,75,1058	1/1:1,13:14:27.08:153,27,0	1/1:0,8:8:9.98:35,10,0	0/1:1,7:8:0.84:22,0,1	0/0:17,0:17:51.16:0,51,716	1/1:0,7:7:17.72:68,18,0	0/1:1,5:6:2.48:17,0,2	0/0:13,0:13:39.12:0,39,529	1/1:0,14:14:34:143,34,0	1/1:1,19:20:50.67:227,51,0	1/1:1,10:11:28.18:115,28,0
chr10	18363724	.	T	TC	14892.45	PASS	AB=0.938;AC=37;AF=0.661;AN=56;BaseQRankSum=-12.038;DP=630;FS=2.833;HRun=2;HaplotypeScore=61.1370;InbreedingCoeff=0.9545;MQ=62.42;MQ0=0;MQRankSum=-0.467;QD=34.31;ReadPosRankSum=2.021;VQSLOD=5.2441;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,44:47:99:1770,123,0	1/1:0,9:9:21.07:302,21,0	0/0:17,0:12:32.86:0,33,352	0/0:19,0:17:27.02:0,27,324	1/1:0,18:17:38.79:500,39,0	0/0:17,0:17:51.16:0,51,632	0/0:29,0:29:81.20:0,81,974	1/1:4,20:23:57.16:780,57,0	1/1:0,22:22:60.05:863,60,0	1/1:2,23:25:69.23:993,69,0	1/1:1,21:22:51.17:734,51,0	0/0:25,0:25:72.20:0,72,868	1/1:0,26:26:63.17:898,63,0	1/1:0,17:17:39.13:561,39,0	0/0:20,0:20:60.18:0,60,731	0/1:14,1:15:1.10:1,0,425	1/1:1,36:37:96.32:1382,96,0	0/0:29,0:29:87.21:0,87,1046	1/1:3,19:22:56.94:734,57,0	1/1:0,13:13:33.11:475,33,0	1/1:3,39:42:90.13:1266,90,0	0/0:18,0:18:48.15:0,48,594	1/1:1,19:19:42.14:601,42,0	1/1:0,25:25:72.24:1036,72,0	0/0:21,0:21:54.15:0,54,655	1/1:1,24:25:72.23:1011,72,0	1/1:1,15:16:45.15:640,45,0	1/1:0,8:8:24.08:345,24,0
chr10	18365761	.	G	GT	1131.39	PASS	AC=30;AF=0.625;AN=48;BaseQRankSum=4.057;DP=150;FS=3.966;HRun=0;HaplotypeScore=27.7021;InbreedingCoeff=0.6558;MQ=85.84;MQ0=4;MQRankSum=-2.418;QD=15.94;ReadPosRankSum=0.104;VQSLOD=4.2497;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,7:6:15.05:227,15,0	./.	0/0:10,0:10:21.40:0,21,225	0/0:16,0:12:15:0,15,195	1/1:2,10:8:9.03:144,9,0	./.	0/0:8,0:8:24.05:0,24,294	./.	1/1:0,5:4:6.02:93,6,0	1/1:0,6:4:3.01:48,3,0	1/1:1,2:2:6.02:87,6,0	0/0:10,0:11:15.05:0,15,209	1/1:1,4:5:6.02:95,6,0	1/1:1,1:3:3.01:37,3,0	0/0:6,0:6:12.03:0,12,151	0/0:12,0:12:29.93:0,30,395	1/1:0,4:4:3.01:47,3,0	0/0:6,0:6:15.01:0,15,188	./.	1/1:0,2:2:3.01:48,3,0	1/1:0,2:2:3.01:48,3,0	0/0:8,0:8:24.03:0,24,312	1/1:0,6:5:9.03:142,9,0	1/1:0,2:2:3.01:48,3,0	0/0:1,0:1:3.01:0,3,42	1/1:1,2:2:3.01:48,3,0	1/1:0,6:5:6.49:96,6,0	1/1:0,2:2:6.02:96,6,0
chr10	18366684	.	AACACACACACACACAC	A	3447.32	PASS	AB=0.821;AC=17;AF=0.327;AN=52;BaseQRankSum=6.394;DP=547;FS=8.041;HRun=0;HaplotypeScore=217.7811;InbreedingCoeff=0.6522;MQ=69.16;MQ0=9;MQRankSum=-5.953;QD=16.03;ReadPosRankSum=0.684;VQSLOD=1.4307;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:34,0:34:0:0,0,0	0/0:10,0:10:6.02:0,6,221	./.	./.	0/0:12,0:17:6.02:0,6,223	1/1:6,14:20:15.05:589,15,0	1/1:9,3:12:3.01:131,3,0	0/0:31,0:29:19.28:0,19,455	1/1:18,0:27:15.05:479,15,0	0/0:22,0:22:27.09:0,27,1151	0/0:8,0:10:12.04:0,12,595	1/1:16,0:16:6.01:139,6,0	0/0:15,0:15:18.06:0,18,807	0/0:15,0:15:18.06:0,18,806	1/1:19,7:28:15.05:615,15,0	1/1:9,5:14:5.67:261,6,0	0/0:16,0:18:24.08:0,24,1054	0/1:13,0:20:11.89:33,0,12	0/0:18,0:18:13.74:0,14,530	0/0:11,0:21:14.08:0,14,808	0/0:15,0:15:12.04:0,12,786	1/1:14,13:27:32.71:969,33,0	0/0:18,0:22:18.04:0,18,762	0/0:18,0:20:15.01:0,15,474	0/1:10,5:15:14.94:233,0,15	0/0:16,0:17:12.04:0,12,535	0/0:13,0:16:12.04:0,12,519	0/0:7,0:6:9.03:0,9,398
chr10	18368104	.	ATT	A	777.94	PASS	AB=0.670;AC=11;AF=0.196;AN=56;BaseQRankSum=-2.412;DP=530;FS=3.453;HRun=17;HaplotypeScore=83.0779;InbreedingCoeff=0.1697;MQ=55.28;MQ0=9;MQRankSum=1.564;QD=5.48;ReadPosRankSum=9.399;VQSLOD=-0.2336;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,2:26:25.15:0,25,296	0/0:3,0:3:6.01:0,6,55	0/0:20,1:9:6.25:0,6,32	0/0:9,1:2:0:0,0,0	0/0:18,0:20:50.64:0,51,409	1/1:9,13:23:3.43:206,3,0	0/1:5,4:12:22.19:83,0,22	0/0:22,0:19:15.93:0,16,133	0/1:8,3:14:8.95:44,0,9	0/0:27,0:27:56.80:0,57,504	0/0:16,0:19:41.99:0,42,383	0/1:6,3:8:14:38,0,14	0/0:7,0:17:15.46:0,15,96	0/0:21,0:22:40.50:0,40,318	0/1:5,6:14:12.59:105,0,13	1/1:6,3:9:8.53:71,9,0	0/0:23,0:27:53.81:0,54,464	0/1:7,10:16:8.30:163,0,8	0/0:21,0:18:32.80:0,33,251	0/0:27,0:30:75.25:0,75,639	0/0:5,0:13:5.97:0,6,48	0/1:12,3:19:25.45:72,0,25	0/0:22,0:22:48.55:0,49,371	0/0:22,0:23:33.37:0,33,300	0/1:11,12:25:28.72:143,0,29	0/0:24,0:24:59.95:0,60,537	0/0:24,0:24:37.13:0,37,300	0/0:8,0:10:26.92:0,27,230
chr10	18368164	.	GTT	G	4332.10	PASS	AB=0.752;AC=31;AF=0.554;AN=56;BaseQRankSum=-7.385;DP=481;FS=1.877;HRun=13;HaplotypeScore=109.5285;InbreedingCoeff=0.7648;MQ=55.16;MQ0=5;MQRankSum=6.776;QD=15.47;ReadPosRankSum=5.649;VQSLOD=3.9624;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:28:53.78:0,54,610	0/1:1,1:3:0.06:49,0,0	1/1:11,0:2:2.68:11,3,0	0/0:13,0:7:8.27:0,8,59	1/1:8,19:27:44.04:498,44,0	0/0:16,0:15:32.49:0,32,283	0/0:19,0:19:41.38:0,41,272	1/1:13,11:23:10.89:294,11,0	0/0:14,0:15:30.03:0,30,356	1/1:9,12:20:40.86:350,41,0	1/1:9,11:20:33.80:347,34,0	0/0:16,0:16:22.76:0,23,197	0/1:6,0:6:5.06:81,0,5	1/1:3,7:12:14.39:169,14,0	0/0:19,0:19:40.34:0,40,272	0/0:14,0:14:34.60:0,35,245	1/1:13,12:25:41.85:386,42,0	0/0:10,0:9:11.15:0,11,68	1/1:7,12:16:31.24:339,31,0	1/1:2,17:19:51.03:488,51,0	1/1:2,6:8:9.01:86,9,0	0/0:16,0:20:45.24:0,45,317	1/1:10,11:21:30.66:287,31,0	0/1:9,10:18:16.33:205,0,16	0/0:23,0:24:49.78:0,50,376	1/1:12,7:21:52.31:421,52,0	1/1:3,14:17:8.52:253,9,0	1/1:5,0:4:8.67:67,9,0
chr10	18368175	.	T	TG	2704.75	PASS	AB=0.871;AC=23;AF=0.411;AN=56;BaseQRankSum=-3.275;DP=483;FS=6.449;HRun=0;HaplotypeScore=105.7570;InbreedingCoeff=0.1651;MQ=53.66;MQ0=8;MQRankSum=5.275;QD=9.59;ReadPosRankSum=8.670;VQSLOD=2.9005;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:26:50.06:0,50,566	0/1:2,1:3:7.66:41,0,8	1/1:7,0:1:2.74:12,3,0	0/0:18,0:4:8.35:0,8,55	0/1:29,4:32:62.56:338,0,63	0/0:17,0:16:27.28:0,27,237	0/0:21,0:19:29.34:0,29,217	0/1:18,0:16:23.48:174,0,23	0/0:15,0:14:17.39:0,17,304	1/1:19,4:19:12.26:347,12,0	1/1:19,3:21:10.86:281,11,0	0/0:16,0:15:28.39:0,28,198	0/1:2,4:6:16.43:106,0,16	0/1:12,1:13:18.08:95,0,18	0/0:18,0:18:39.25:0,39,245	0/0:14,0:14:33.77:0,34,228	1/1:18,4:22:32.05:273,32,0	0/1:10,0:7:0.29:0,0,32	1/1:15,0:14:18.23:183,18,0	0/1:23,0:22:41.44:140,0,41	0/0:11,0:11:1.47:0,1,15	0/0:20,0:19:28.58:0,29,222	0/1:18,5:23:5.84:273,0,6	0/1:16,2:17:25.05:96,0,25	0/0:24,0:23:32.49:0,32,235	0/1:15,8:23:32.71:355,0,33	0/1:18,1:19:56.97:104,0,57	1/1:3,1:3:8.23:68,8,0
chr10	18368177	.	TG	T	2151.93	PASS	AB=0.914;AC=19;AF=0.339;AN=56;BaseQRankSum=0.298;DP=481;FS=8.143;HRun=1;HaplotypeScore=104.4825;InbreedingCoeff=0.6044;MQ=53.53;MQ0=10;MQRankSum=-4.928;QD=10.92;ReadPosRankSum=-3.610;VQSLOD=0.0802;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:26:48.80:0,49,468	0/0:3,0:3:7:0,7,33	0/0:9,1:1:0.89:0,1,2	0/0:17,1:4:8.49:0,8,59	0/0:33,1:33:53.92:0,54,407	0/1:13,4:16:11.52:126,0,12	1/1:9,10:17:26.87:342,27,0	0/1:18,0:16:11.30:11,0,100	0/0:15,0:14:40.41:0,40,338	0/0:23,0:19:50.92:0,51,315	0/0:20,0:19:50.34:0,50,280	1/1:11,5:15:32.75:287,33,0	0/0:5,0:5:14.21:0,14,85	0/0:12,0:12:18.96:0,19,98	1/1:12,7:18:42.38:406,42,0	1/1:7,7:13:24.90:294,25,0	0/0:22,0:22:50.07:0,50,261	1/1:10,1:7:15.26:106,15,0	0/0:14,0:14:20.36:0,20,86	0/1:23,0:22:46.15:46,0,50	1/1:11,0:11:10.65:43,11,0	0/1:15,7:19:6.95:258,0,7	0/0:22,0:22:47.94:0,48,284	0/0:17,0:16:26.05:0,26,142	1/1:12,11:22:37.67:405,38,0	0/0:23,0:23:54.01:0,54,384	0/0:19,0:19:38.96:0,39,209	0/1:4,0:3:2.82:23,0,3
chr10	18368193	.	GT	G	914.49	PASS	AB=0.892;AC=21;AF=0.375;AN=56;BaseQRankSum=7.624;DP=505;FS=2.293;HRun=13;HaplotypeScore=105.1053;InbreedingCoeff=0.6989;MQ=47.81;MQ0=28;MQRankSum=-8.148;QD=4.50;ReadPosRankSum=1.307;VQSLOD=2.3134;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:10,22:31:24.59:232,25,0	0/0:3,0:3:7.84:0,8,34	0/0:18,0:1:0:0,0,0	0/0:18,0:2:0:0,0,0	0/0:35,1:33:43.76:0,44,314	1/1:4,5:16:25.67:164,26,0	1/1:8,4:14:17.69:105,18,0	0/0:19,0:18:8.57:0,9,32	0/0:15,1:14:11.97:0,12,146	0/0:25,0:20:35.42:0,35,150	0/0:18,0:16:34.56:0,35,182	1/1:3,2:10:18.48:102,18,0	0/0:8,0:8:14.33:0,14,58	0/0:14,0:14:22.47:0,22,141	1/1:7,1:10:7.33:32,7,0	1/1:6,4:12:18.39:110,18,0	0/0:26,0:25:35.69:0,36,227	1/1:5,4:7:12.43:64,12,0	0/1:13,0:10:6.25:6,0,19	0/1:22,0:25:13.08:13,0,24	0/1:12,0:13:8.55:9,0,13	1/1:9,4:17:14.85:131,15,0	0/0:21,0:20:34.94:0,35,175	0/0:20,0:20:38.90:0,39,179	1/1:8,6:15:22.93:145,23,0	0/0:26,0:26:22.43:0,22,192	0/0:22,0:22:44.32:0,44,265	0/0:7,0:6:7.39:0,7,21
chr10	18370802	.	C	CTG	1672.91	PASS	AB=0.954;AC=41;AF=0.732;AN=56;BaseQRankSum=-2.432;DP=541;FS=0.000;HRun=0;HaplotypeScore=148.2531;InbreedingCoeff=0.1533;MQ=62.97;MQ0=12;MQRankSum=1.302;QD=3.74;ReadPosRankSum=-0.621;VQSLOD=2.7874;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:2.40:0,2,88	1/1:7,1:8:3.01:30,3,0	0/0:24,0:16:18.05:0,18,117	0/0:29,0:20:17.83:0,18,159	1/1:21,0:21:4.96:91,5,0	1/1:20,0:20:0.79:2,1,0	1/1:16,0:15:7.34:51,7,0	0/1:32,0:28:23.84:25,0,24	0/0:19,0:18:13.69:0,14,51	1/1:16,1:16:9.56:49,10,0	1/1:13,1:14:8.98:90,9,0	1/1:23,1:24:4.13:98,4,0	0/1:17,2:19:7.73:173,0,8	0/1:13,3:16:0.66:39,0,1	0/1:19,0:19:5.24:26,0,5	1/1:21,0:23:2.30:53,2,0	1/1:14,1:15:7.30:85,7,0	1/1:10,0:9:3.98:59,4,0	1/1:28,0:27:4.94:171,5,0	1/1:15,0:15:8.85:82,9,0	1/1:33,0:32:14.53:155,15,0	0/1:17,0:16:9.24:17,0,9	1/1:11,0:11:2.98:49,3,0	0/1:11,0:10:11.31:11,0,37	1/1:20,0:19:0.19:63,0,0	0/1:25,2:27:12.32:192,0,12	1/1:21,2:21:4.31:153,4,0	1/1:7,1:8:5.91:60,6,0
chr10	18370820	.	GTC	G	4867.51	PASS	AB=0.984;AC=49;AF=0.875;AN=56;BaseQRankSum=-3.271;DP=571;FS=1.333;HRun=0;HaplotypeScore=152.7088;InbreedingCoeff=0.1208;MQ=46.82;MQ0=28;MQRankSum=2.774;QD=8.79;ReadPosRankSum=-1.254;VQSLOD=4.4681;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:16,8:24:8.57:399,9,0	1/1:7,0:6:5.96:46,6,0	0/1:17,0:9:3.94:4,0,72	0/0:17,0:8:17.09:0,17,157	1/1:21,4:25:2.62:187,3,0	1/1:22,1:22:23.47:178,23,0	1/1:13,1:13:24.22:195,24,0	1/1:44,0:34:13.20:362,13,0	1/1:16,8:22:42.40:432,42,0	1/1:24,0:22:2.52:206,3,0	1/1:12,0:12:8.92:70,9,0	1/1:23,2:25:26.39:188,26,0	0/1:21,2:23:13.58:195,0,14	1/1:15,0:15:15.59:104,16,0	1/1:24,0:23:38.27:324,38,0	1/1:22,5:26:25.41:251,25,0	1/1:18,0:17:10.87:78,11,0	1/1:12,1:12:33.74:298,34,0	0/1:31,0:28:40.84:282,0,41	1/1:14,2:16:8.41:43,8,0	1/1:35,0:32:5.03:83,5,0	1/1:12,2:13:18.40:181,18,0	1/1:12,2:12:7.27:101,7,0	0/1:15,0:14:30.38:59,0,30	1/1:17,1:17:4.63:154,5,0	0/1:22,0:21:10.44:201,0,10	1/1:26,0:24:18.33:200,18,0	1/1:4,0:4:6.85:47,7,0
chr10	18370828	.	GTC	G	4703.82	PASS	AB=0.989;AC=49;AF=0.875;AN=56;BaseQRankSum=-3.430;DP=579;FS=21.347;HRun=0;HaplotypeScore=159.5094;InbreedingCoeff=-0.1517;MQ=45.13;MQ0=33;MQRankSum=3.511;QD=8.12;ReadPosRankSum=-2.910;VQSLOD=2.6460;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:27,1:27:12.64:404,13,0	1/1:7,0:6:2:38,2,0	1/1:8,0:4:2.04:6,2,0	0/1:13,0:5:12.93:25,0,13	0/1:23,1:24:2.36:140,0,2	1/1:26,0:25:29.36:219,29,0	1/1:15,0:14:27.22:221,27,0	1/1:49,0:39:43.98:382,44,0	1/1:21,2:21:38.33:419,38,0	0/1:25,0:23:2.79:212,0,3	1/1:15,0:15:7.50:87,8,0	1/1:25,0:25:3.12:147,3,0	0/1:25,1:26:11.33:204,0,11	1/1:14,0:14:11.47:66,11,0	1/1:22,0:21:35.76:305,36,0	1/1:25,1:25:25.89:255,26,0	1/1:17,0:15:1.94:34,2,0	1/1:15,0:14:37.13:330,37,0	0/1:28,0:25:48.70:218,0,49	1/1:19,0:18:8.27:42,8,0	1/1:37,1:33:3.57:70,4,0	1/1:12,0:11:12.41:133,12,0	1/1:14,1:13:7.66:63,8,0	0/1:17,0:15:29.13:59,0,29	1/1:18,0:17:2.49:127,2,0	0/1:23,0:22:1.87:246,0,2	1/1:27,0:25:17.80:203,18,0	1/1:4,0:4:8.10:50,8,0
chr10	18370830	.	CTGTGTGTGTG	C	1022.53	PASS	AB=0.968;AC=8;AF=0.148;AN=54;BaseQRankSum=-5.188;DP=580;FS=0.603;HRun=0;HaplotypeScore=224.3232;InbreedingCoeff=0.3057;MQ=44.00;MQ0=32;MQRankSum=-1.116;QD=6.55;ReadPosRankSum=-3.710;VQSLOD=1.9311;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:27:33.56:0,34,468	0/0:7,0:6:4.95:0,5,45	./.	0/0:10,0:4:5.09:0,5,63	0/0:26,0:26:13.94:0,14,232	0/0:26,0:25:21.24:0,21,169	0/0:17,0:16:18.48:0,18,207	1/1:24,26:40:49.63:956,50,0	0/0:23,0:21:29.13:0,29,429	0/0:26,0:24:48.81:0,49,847	0/0:14,0:14:16.23:0,16,226	0/0:25,0:25:38.15:0,38,776	0/0:26,0:26:41:0,41,783	0/0:15,0:15:6.49:0,6,132	0/0:22,0:21:17.85:0,18,270	0/0:25,0:24:25.56:0,26,366	0/0:16,0:14:15.09:0,15,187	0/0:15,0:14:9.44:0,9,310	0/1:23,0:24:68.70:69,0,414	1/1:17,0:18:8.03:32,8,0	0/1:37,0:33:50.85:51,0,215	0/0:12,0:11:12.81:0,13,281	0/0:15,0:13:10.10:0,10,88	0/1:19,0:17:35.30:35,0,142	0/0:18,0:17:24:0,24,414	0/0:23,0:22:33.52:0,34,1058	0/0:28,0:26:32.05:0,32,291	0/1:4,0:4:20.18:20,0,22
chr10	18370832	.	G	GTC	862.50	PASS	AB=0.965;AC=14;AF=0.259;AN=54;BaseQRankSum=-0.612;DP=588;FS=2.558;HRun=0;HaplotypeScore=182.3926;InbreedingCoeff=0.1957;MQ=43.83;MQ0=36;MQRankSum=-2.399;QD=3.52;ReadPosRankSum=2.457;VQSLOD=2.2473;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:27:44.64:0,45,428	1/1:7,0:6:2.59:11,3,0	./.	0/0:16,0:6:14.79:0,15,118	0/0:26,0:26:13.02:0,13,95	0/0:27,0:26:26.67:0,27,198	0/0:16,0:15:19.57:0,20,151	0/1:51,0:40:69.49:217,0,69	0/0:25,0:23:42.36:0,42,356	0/0:27,0:25:48.83:0,49,339	0/1:14,0:14:5.60:6,0,65	0/0:25,0:25:15.58:0,16,235	0/1:26,0:26:10.66:11,0,176	0/1:16,0:16:1.83:2,0,82	0/0:22,0:21:35.30:0,35,274	0/0:24,0:23:11.48:0,11,171	0/1:16,0:14:20.83:21,0,36	0/0:15,0:14:32.24:0,32,230	0/1:17,10:26:99:346,0,106	1/1:6,14:19:8.70:164,9,0	1/1:18,20:33:9.01:188,9,0	0/0:12,0:11:14.99:0,15,133	0/0:15,0:13:8.52:0,9,84	0/0:19,0:17:23.65:0,24,216	0/0:16,0:15:15.47:0,15,136	0/0:23,0:22:19.11:0,19,260	0/1:25,0:23:37.69:38,0,156	0/1:4,0:4:5.86:12,0,6
chr10	18370854	.	GTC	G	1038.02	PASS	AB=0.993;AC=29;AF=0.518;AN=56;BaseQRankSum=-0.848;DP=620;FS=12.923;HRun=0;HaplotypeScore=161.9721;InbreedingCoeff=0.2272;MQ=46.62;MQ0=36;MQRankSum=-0.508;QD=2.52;ReadPosRankSum=3.852;VQSLOD=2.0137;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:32:45.67:75,0,46	0/1:9,0:7:4.93:12,0,5	0/1:25,0:7:15.43:41,0,15	0/1:32,0:10:16.03:16,0,101	0/1:26,0:26:7.84:8,0,68	1/1:20,1:21:18.80:88,19,0	1/1:17,1:17:22.37:143,22,0	0/0:48,0:42:48.92:0,49,1054	1/1:24,0:23:12.59:116,13,0	0/0:24,0:22:33.37:0,33,268	0/0:14,0:14:15.03:0,15,115	0/1:20,0:21:1.27:97,0,1	0/1:22,0:22:17.44:17,0,132	0/0:16,0:16:5.89:0,6,44	1/1:20,1:20:18.16:111,18,0	1/1:17,0:16:6.68:51,7,0	0/0:18,0:16:5.84:0,6,30	1/1:14,1:15:16.36:156,16,0	0/1:26,0:23:27.10:27,0,499	0/0:21,0:20:18:0,18,265	0/0:44,0:38:39.34:0,39,460	1/1:14,1:14:11.28:66,11,0	0/1:16,0:14:27.76:28,0,64	0/0:23,0:21:24.06:0,24,198	1/1:20,0:19:12.80:69,13,0	0/1:24,0:23:30.16:30,0,295	1/1:21,0:20:6.77:39,7,0	0/1:5,0:5:2.95:34,0,3
chr10	18370856	.	CTG	C	2210.06	PASS	AB=0.832;AC=23;AF=0.411;AN=56;BaseQRankSum=-2.179;DP=628;FS=3.324;HRun=0;HaplotypeScore=157.9320;InbreedingCoeff=0.3451;MQ=47.91;MQ0=36;MQRankSum=1.272;QD=6.56;ReadPosRankSum=5.828;VQSLOD=2.8224;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:15,17:32:14.90:280,0,15	0/0:9,0:7:3.98:0,4,12	0/0:28,0:8:17.92:0,18,138	0/0:33,0:12:22:0,22,208	0/0:27,0:27:15.23:0,15,69	1/1:10,10:21:20.53:229,21,0	1/1:6,13:18:23.84:272,24,0	0/0:48,0:42:67.81:0,68,942	1/1:6,19:24:27.54:312,28,0	0/0:23,0:22:11.96:0,12,106	0/0:14,0:15:12.04:0,12,61	1/1:14,7:21:9.42:248,9,0	0/1:19,1:20:32.20:32,0,52	0/1:16,0:16:4.62:5,0,13	1/1:7,14:20:17.91:216,18,0	1/1:9,8:16:12.31:141,12,0	0/0:17,0:15:1.83:0,2,3	1/1:5,9:14:24.06:277,24,0	0/1:24,3:24:62.87:63,0,402	0/0:21,0:20:12.04:0,12,192	0/0:45,0:39:39.53:0,40,545	0/1:9,7:15:17.98:30,0,18	0/0:16,0:14:9.76:0,10,47	0/1:13,0:21:16.69:48,0,17	0/1:6,13:18:0.29:228,0,0	0/1:24,0:23:9.50:9,0,140	0/1:21,0:20:5.15:5,0,8	0/0:7,0:7:6.11:0,6,29
chr10	18370860	.	G	GTGTC	4018.53	PASS	AB=0.796;AC=22;AF=0.393;AN=56;BaseQRankSum=-2.751;DP=646;FS=9.960;HRun=0;HaplotypeScore=171.6094;InbreedingCoeff=0.2435;MQ=50.03;MQ0=29;MQRankSum=-3.916;QD=12.40;ReadPosRankSum=-0.394;VQSLOD=2.6014;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:34:43.64:0,44,371	0/0:4,4:7:2.77:0,3,13	0/0:33,0:10:23.64:0,24,250	0/0:37,0:14:30.37:0,30,307	0/1:8,18:27:10.01:10,0,21	0/1:22,0:22:10.08:10,0,77	0/0:19,0:18:8.39:0,8,146	0/1:45,0:41:99:114,0,940	0/0:26,0:25:33.76:0,34,320	1/1:5,17:22:49.46:936,49,0	1/1:5,10:15:8.66:112,9,0	0/1:22,0:22:22.04:22,0,223	0/1:7,14:21:22.56:314,0,23	1/1:6,12:21:1.12:218,1,0	0/0:18,0:18:14.02:0,14,127	0/0:15,0:15:5.89:0,6,52	1/1:4,14:18:7.87:106,8,0	0/1:11,0:11:12:12,0,136	0/0:25,0:23:26.12:0,26,582	0/0:21,0:21:8.73:0,9,207	0/0:48,0:42:47.81:0,48,673	0/0:16,0:15:14.55:0,15,96	0/1:5,12:15:15.02:153,0,15	1/1:17,7:22:22.72:760,23,0	0/0:19,1:19:12.78:0,13,115	0/1:9,18:28:16.79:1084,0,17	1/1:7,13:20:1.65:127,2,0	1/1:6,0:6:3.91:40,4,0
chr10	18370862	.	G	GTC	1268.55	PASS	AB=0.978;AC=13;AF=0.232;AN=56;BaseQRankSum=2.670;DP=646;FS=18.051;HRun=0;HaplotypeScore=162.8857;InbreedingCoeff=-0.0175;MQ=50.41;MQ0=27;MQRankSum=-4.093;QD=4.58;ReadPosRankSum=1.348;VQSLOD=2.1437;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:35:47.54:0,48,385	0/0:9,0:7:5.77:0,6,36	0/0:34,0:11:28.13:0,28,315	0/0:38,0:14:18.62:0,19,297	0/1:28,0:28:6.83:10,0,7	0/0:22,0:22:23.57:0,24,164	0/0:19,0:18:22.18:0,22,149	0/1:42,0:40:10.59:11,0,861	0/0:26,0:25:34.50:0,34,263	0/1:22,1:21:8.09:347,0,8	1/1:14,1:15:8.54:100,9,0	0/0:22,0:22:16.02:0,16,235	0/1:19,1:20:39.34:151,0,39	0/1:19,2:21:19.39:83,0,19	0/0:18,0:18:17.56:0,18,144	0/1:16,0:16:2.16:2,0,71	0/1:21,0:19:12.84:51,0,13	0/0:11,0:11:14.40:0,14,142	0/0:25,0:23:36.03:0,36,558	0/0:20,0:20:14.30:0,14,193	0/0:47,0:42:43.58:0,44,625	0/0:17,0:16:14.78:0,15,104	0/1:15,0:13:15.13:55,0,15	0/1:26,0:24:7.84:192,0,8	0/0:20,0:19:16.88:0,17,160	0/1:27,0:27:99:381,0,126	0/1:21,1:21:7.37:37,0,7	0/0:5,0:5:7.24:0,7,60
chr10	18371617	.	TA	T	12369.29	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=5.666;DP=484;FS=1.595;HRun=5;HaplotypeScore=94.0156;InbreedingCoeff=0.9666;MQ=70.57;MQ0=0;MQRankSum=-10.288;QD=40.16;ReadPosRankSum=1.074;VQSLOD=2.5585;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,12:12:33.11:460,33,0	1/1:1,5:6:18.06:251,18,0	0/0:19,0:17:39.58:0,40,513	0/0:15,0:16:5.92:0,6,244	1/1:5,29:34:99:1390,102,0	0/0:11,0:11:30.02:0,30,425	0/0:8,0:8:24.08:0,24,383	1/1:2,21:23:65.79:894,66,0	1/1:0,17:17:51.17:700,51,0	1/1:5,14:19:57.17:753,57,0	1/1:2,17:19:57.19:787,57,0	0/0:16,0:16:41.84:0,42,645	1/1:3,13:16:45.15:626,45,0	1/1:2,10:12:36.10:479,36,0	0/0:17,0:17:51.16:0,51,788	0/0:25,1:26:33.37:0,33,1089	1/1:3,12:15:40.38:542,40,0	0/0:20,0:20:57.19:0,57,884	1/1:1,19:20:60.17:815,60,0	1/1:5,22:27:81.25:1088,81,0	1/1:1,8:9:27.03:343,27,0	0/0:17,0:17:51.16:0,51,793	1/1:0,17:17:51.17:707,51,0	1/1:1,8:9:27.09:368,27,0	0/0:26,0:26:63.18:0,63,953	1/1:4,27:31:93.31:1295,93,0	1/1:1,18:19:57.19:789,57,0	1/1:0,3:3:6.02:84,6,0
chr10	18371636	.	GAA	G	7245.46	PASS	AB=0.556;AC=37;AF=0.661;AN=56;BaseQRankSum=3.477;DP=514;FS=0.000;HRun=12;HaplotypeScore=130.1041;InbreedingCoeff=0.8231;MQ=66.43;MQ0=0;MQRankSum=-8.887;QD=20.64;ReadPosRankSum=-1.947;VQSLOD=3.1338;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,9:11:21.04:214,21,0	1/1:1,5:6:15.02:145,15,0	0/0:22,0:18:31.93:0,32,345	0/0:14,0:13:16.18:0,16,218	1/1:1,35:36:87.12:884,87,0	0/1:2,1:10:12.54:13,0,35	0/0:2,0:9:17.65:0,18,63	1/1:18,14:32:2.54:333,3,0	1/1:2,0:19:49.40:214,49,0	1/1:5,15:20:48.08:488,48,0	1/1:3,18:21:54.11:549,54,0	0/0:1,0:15:29.62:0,30,105	1/1:2,17:19:51.10:518,51,0	1/1:2,11:14:26.79:327,27,0	0/0:5,0:16:33.47:0,33,186	0/0:5,0:25:39.26:0,39,181	1/1:7,15:22:27.83:410,28,0	0/0:3,0:21:39.93:0,40,140	1/1:5,15:22:40.07:452,40,0	1/1:2,23:25:63.08:641,63,0	1/1:3,6:9:17.90:183,18,0	0/0:3,0:12:19.69:0,20,68	1/1:5,17:22:48.06:488,48,0	1/1:3,7:10:21.05:214,21,0	0/0:1,2:29:0.39:0,0,152	1/1:7,19:28:53.56:583,54,0	1/1:2,19:22:56.84:561,57,0	1/1:2,1:3:3:31,3,0
chr10	18372945	.	TACACACAC	T	1542.22	PASS	AB=0.979;AC=25;AF=0.481;AN=52;BaseQRankSum=0.050;DP=527;FS=5.156;HRun=0;HaplotypeScore=140.5899;InbreedingCoeff=-0.0504;MQ=60.95;MQ0=18;MQRankSum=-4.920;QD=5.28;ReadPosRankSum=-0.365;VQSLOD=2.3495;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:33:40.42:0,40,939	1/1:7,0:7:2.99:24,3,0	./.	./.	0/1:12,0:12:45.29:45,0,69	1/1:8,5:12:8.96:116,9,0	0/0:24,2:26:3.01:0,3,68	0/0:25,0:25:8.78:0,9,61	0/1:16,1:23:21.10:167,0,21	0/0:11,0:11:3.06:0,3,8	0/1:14,0:14:22.90:32,0,23	1/1:12,5:18:24:413,24,0	0/1:15,0:15:9.93:83,0,10	0/1:19,0:18:15.23:15,0,47	1/1:12,10:20:1.58:151,2,0	1/1:16,6:23:5.80:101,6,0	0/1:25,0:22:63.48:63,0,81	0/1:17,0:15:99:116,0,172	0/0:9,0:8:3.01:0,3,38	0/0:11,0:17:15.05:0,15,249	0/0:28,0:33:9.03:0,9,140	1/1:6,3:8:5.99:57,6,0	0/1:18,0:17:24.82:45,0,25	0/0:28,0:26:6.02:0,6,73	1/1:6,2:7:6.01:101,6,0	0/1:16,0:16:35.68:73,0,36	0/1:21,0:21:81.24:90,0,81	0/1:11,0:7:9.17:9,0,22
chr10	18377101	.	T	TAC	29850.13	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-6.973;DP=617;FS=0.828;HRun=0;HaplotypeScore=75.5836;InbreedingCoeff=0.9928;MQ=65.20;MQ0=3;MQRankSum=-4.950;QD=50.85;ReadPosRankSum=5.573;VQSLOD=5.9487;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,47:47:99:2606,135,0	1/1:0,9:9:21.07:406,21,0	0/0:13,0:13:19.89:0,20,203	0/0:16,0:16:30.88:0,31,492	1/1:1,34:35:96.33:1843,96,0	1/1:0,25:25:72.25:1391,72,0	1/1:1,17:18:45.15:869,45,0	1/1:1,31:33:96.26:1720,96,0	1/1:1,23:24:63.22:1212,63,0	1/1:0,21:21:63.22:1202,63,0	1/1:1,19:21:45.15:860,45,0	1/1:2,22:24:63.22:1213,63,0	1/1:0,19:19:50.88:984,51,0	1/1:1,23:24:69.24:1331,69,0	1/1:1,29:30:78.27:1506,78,0	1/1:0,17:17:45.15:869,45,0	1/1:0,21:21:54.19:1042,54,0	1/1:0,16:16:42.14:811,42,0	1/1:6,21:27:69.22:1271,69,0	1/1:0,18:19:45.15:869,45,0	1/1:1,20:21:54.19:1043,54,0	1/1:1,8:9:24.08:463,24,0	1/1:0,25:25:63.22:1217,63,0	1/1:3,20:23:63.20:1182,63,0	1/1:2,22:24:57.20:1101,57,0	1/1:1,24:26:72.25:1391,72,0	1/1:1,17:18:51.17:985,51,0	1/1:0,8:8:24.08:464,24,0
chr10	18378339	.	CCAA	C	1070.83	PASS	AB=0.977;AC=15;AF=0.268;AN=56;BaseQRankSum=1.678;DP=562;FS=2.740;HRun=0;HaplotypeScore=129.9021;InbreedingCoeff=-0.2138;MQ=64.03;MQ0=11;MQRankSum=2.789;QD=3.81;ReadPosRankSum=3.615;VQSLOD=2.5201;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:32,0:33:75.01:99,0,75	1/1:6,0:6:7.69:28,8,0	0/0:27,0:9:5.35:0,5,42	0/0:31,0:20:2.64:0,3,102	0/1:29,1:29:17.70:189,0,18	0/0:22,0:21:50.12:0,50,414	0/0:17,0:17:41.89:0,42,330	0/0:24,0:24:47.82:0,48,292	0/1:17,0:17:34.59:51,0,35	0/1:22,0:22:27.16:27,0,61	0/1:32,0:31:78.15:78,0,110	0/0:8,0:8:17.96:0,18,143	0/1:9,1:10:38.83:39,0,95	0/1:19,0:19:46.61:106,0,47	0/0:13,0:13:29.92:0,30,239	0/0:19,0:19:49.33:0,49,372	0/1:21,1:22:56.48:123,0,56	0/0:13,0:13:35.17:0,35,285	0/0:32,0:31:66.91:0,67,402	0/0:29,0:29:57.15:0,57,279	0/0:11,0:11:19.27:0,19,128	0/0:15,0:14:32.83:0,33,254	0/1:23,0:23:53.20:88,0,53	0/1:8,1:9:31.22:47,0,31	0/0:18,0:18:44.89:0,45,405	0/1:19,0:19:38.56:81,0,39	0/1:24,0:24:10.03:191,0,10	0/1:15,0:15:42.80:82,0,43
chr10	18378352	.	CAAA	C	5686.71	PASS	AB=0.618;AC=37;AF=0.661;AN=56;BaseQRankSum=-8.965;DP=534;FS=7.518;HRun=15;HaplotypeScore=113.7511;InbreedingCoeff=0.3839;MQ=59.70;MQ0=10;MQRankSum=2.002;QD=13.48;ReadPosRankSum=-0.273;VQSLOD=2.9014;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,22:30:50.33:548,50,0	1/1:0,6:6:9:101,9,0	0/0:22,0:7:5.40:0,5,43	0/0:22,0:10:2.89:0,3,41	1/1:4,23:29:70.15:700,70,0	0/0:6,0:19:7.91:0,8,86	0/1:2,0:20:9.67:10,0,45	0/1:9,0:24:15.34:105,0,15	1/1:2,11:13:23.91:269,24,0	1/1:8,9:21:49.28:488,49,0	1/1:6,18:27:42.79:453,43,0	0/1:3,0:8:1.53:2,0,21	1/1:6,3:9:8.67:95,9,0	1/1:6,7:13:26.19:276,26,0	0/1:8,0:15:4.16:77,0,4	0/0:3,0:20:2.40:0,2,52	1/1:7,12:21:44.91:466,45,0	0/0:3,0:14:7.71:0,8,80	0/1:16,0:27:12.72:122,0,13	1/1:7,1:30:29.50:192,29,0	0/1:4,0:12:4.58:31,0,5	0/0:3,0:13:8.09:0,8,53	1/1:5,17:22:38.85:419,39,0	1/1:3,7:11:10.48:131,10,0	0/1:7,0:23:13.36:13,0,95	1/1:4,14:18:21.40:439,21,0	1/1:4,19:24:40.14:452,40,0	1/1:5,11:17:25.28:299,25,0
chr10	18378354	.	A	AC	3610.39	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=-6.931;DP=524;FS=2.052;HRun=0;HaplotypeScore=105.0286;InbreedingCoeff=0.9397;MQ=59.93;MQ0=10;MQRankSum=0.543;QD=12.67;ReadPosRankSum=-1.238;VQSLOD=4.0047;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:27:59.62:307,60,0	0/0:6,0:6:8.98:0,9,71	0/1:19,0:5:1.36:1,0,40	0/0:22,0:10:8.64:0,9,71	0/0:30,0:29:78.93:0,79,569	1/1:20,0:19:47:246,47,0	1/1:20,0:20:53.51:280,54,0	1/1:25,1:26:43.94:371,44,0	1/1:12,0:12:28.12:144,28,0	0/0:21,0:21:47.26:0,47,413	0/0:27,0:27:67.47:0,67,508	1/1:8,0:8:20.06:113,20,0	0/0:9,0:9:20.95:0,21,173	0/0:12,0:12:35.89:0,36,290	1/1:11,2:13:34.37:205,34,0	1/1:19,0:19:50.06:261,50,0	0/0:20,0:20:56.83:0,57,447	1/1:14,0:14:31.96:143,32,0	1/1:28,1:28:75.43:479,75,0	1/1:29,0:29:76.41:441,76,0	1/1:12,0:12:23.46:157,23,0	1/1:14,0:13:35.97:191,36,0	0/0:21,0:21:49.95:0,50,394	0/0:11,0:11:20.86:0,21,157	1/1:23,0:23:49.49:270,49,0	0/0:17,0:17:38.79:0,39,345	0/0:26,0:25:56.04:0,56,438	0/0:17,0:17:41.83:0,42,328
chr10	18381613	.	A	AAAAG	5547.33	PASS	AB=0.822;AC=31;AF=0.646;AN=48;BaseQRankSum=-3.090;DP=543;FS=1.321;HRun=0;HaplotypeScore=86.9121;InbreedingCoeff=0.4901;MQ=68.09;MQ0=3;MQRankSum=-0.072;QD=14.71;ReadPosRankSum=-1.313;VQSLOD=4.3747;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:28:1.79:322,0,2	1/1:4,0:7:6.02:90,6,0	./.	./.	1/1:20,0:31:12.04:163,12,0	0/0:15,0:15:15.04:0,15,208	0/0:15,0:15:9.03:0,9,136	./.	1/1:8,5:15:12.04:277,12,0	1/1:15,4:22:21.02:326,21,0	1/1:15,8:23:21.07:485,21,0	0/1:13,7:20:99:184,0,165	1/1:14,12:25:27.09:617,27,0	0/1:9,7:16:24.26:395,0,24	0/0:24,0:24:27.08:0,27,389	0/0:15,0:15:21.06:0,21,300	1/1:11,15:28:33.11:763,33,0	0/1:21,0:21:8.76:9,0,251	1/1:16,0:15:3:28,3,0	0/1:13,12:24:6.26:677,0,6	./.	0/0:22,0:22:21.05:0,21,278	1/1:14,6:19:12.04:273,12,0	1/1:9,5:16:4.34:201,4,0	0/0:27,0:27:33.11:0,33,499	1/1:9,0:17:21.07:389,21,0	1/1:17,1:32:15.05:259,15,0	1/1:14,0:14:6:92,6,0
chr10	18383977	.	A	ATG	2873.64	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=11.280;DP=452;FS=80.718;HRun=0;HaplotypeScore=160.7660;InbreedingCoeff=0.8455;MQ=83.67;MQ0=0;MQRankSum=-11.462;QD=26.61;ReadPosRankSum=0.585;VQSLOD=0.9127;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:87.28:0,87,1387	0/1:3,0:3:1.78:55,0,2	0/0:17,0:17:42.11:0,42,636	0/0:18,0:18:45.13:0,45,637	1/1:15,0:15:15.26:252,15,0	0/0:23,0:23:66.23:0,66,1076	0/0:14,0:14:42.14:0,42,685	0/0:30,0:30:90.29:0,90,1424	0/0:22,0:22:66.23:0,66,1071	1/1:17,0:17:42.18:748,42,0	1/1:7,2:10:4.93:221,5,0	0/0:10,0:10:30.10:0,30,484	1/1:9,0:9:23.91:396,24,0	1/1:7,0:7:8.17:236,8,0	0/0:34,0:34:99:0,99,1615	0/0:20,0:20:60.20:0,60,979	1/1:5,0:5:8.99:132,9,0	0/0:3,0:3:9.03:0,9,147	0/0:22,0:22:66.21:0,66,1045	0/0:20,0:20:54.18:0,54,880	0/0:30,0:30:84.27:0,84,1346	0/0:19,0:19:57.17:0,57,881	1/1:3,4:8:15.05:285,15,0	1/1:2,2:4:3.01:60,3,0	0/0:30,0:30:84.26:0,84,1322	1/1:4,2:6:12.51:232,13,0	1/1:12,2:14:10.45:295,10,0	1/1:10,0:10:2.98:167,3,0
chr10	18384556	.	AG	A	1627.43	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=7.387;DP=636;FS=24.155;HRun=2;HaplotypeScore=64.9971;InbreedingCoeff=0.9974;MQ=82.72;MQ0=0;MQRankSum=-8.585;QD=31.91;ReadPosRankSum=-3.533;VQSLOD=1.1637;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,138,2031	0/0:6,0:6:18.06:0,18,270	0/0:24,0:24:63.60:0,64,889	0/0:24,0:24:62.54:0,63,961	0/0:31,0:31:90.29:0,90,1325	0/0:23,0:23:69.22:0,69,1014	0/0:18,0:18:54.17:0,54,790	1/1:1,10:11:30.10:389,30,0	0/0:32,0:32:96.32:0,96,1419	0/0:27,0:27:78.26:0,78,1152	0/0:24,0:24:72.24:0,72,1078	0/0:17,0:17:45.14:0,45,653	0/0:17,0:17:51.17:0,51,761	0/0:40,0:40:99:0,120,1777	0/0:42,0:42:99:0,123,1779	0/0:26,0:26:75.20:0,75,1080	0/0:23,0:23:66.22:0,66,982	0/0:14,0:14:42.14:0,42,629	1/1:0,12:12:36.12:467,36,0	1/1:1,15:16:42.14:542,42,0	1/1:1,11:12:30.10:389,30,0	0/0:19,0:19:54.17:0,54,789	0/0:18,0:18:51.14:0,51,720	0/0:23,0:23:69.22:0,69,1014	0/0:28,0:28:84.28:0,84,1258	0/0:21,0:21:63.21:0,63,942	0/0:28,0:28:84.27:0,84,1230	0/0:14,0:14:42.14:0,42,629
chr10	18392020	.	AG	A	829.44	PASS	AC=30;AF=0.682;AN=44;BaseQRankSum=1.117;DP=89;FS=0.000;HRun=6;HaplotypeScore=9.4469;InbreedingCoeff=0.4275;MQ=21.09;MQ0=39;MQRankSum=0.083;QD=13.82;ReadPosRankSum=1.583;VQSLOD=0.5093;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,5:6:15.04:161,15,0	./.	./.	./.	1/1:2,5:4:12.03:129,12,0	0/0:1,0:1:3.01:0,3,39	0/0:5,0:1:3.01:0,3,39	1/1:2,6:7:18.05:193,18,0	1/1:1,1:1:3.01:32,3,0	1/1:0,2:1:3.01:32,3,0	1/1:1,1:1:3.01:32,3,0	0/0:2,0:2:6.02:0,6,72	1/1:1,2:2:6.01:63,6,0	1/1:2,1:1:3.01:32,3,0	./.	0/0:3,0:1:3.01:0,3,39	1/1:2,1:1:3.01:32,3,0	0/0:2,0:2:3.01:0,3,39	1/1:2,1:1:3.01:32,3,0	1/1:3,2:2:6.02:64,6,0	./.	0/0:3,0:1:3.01:0,3,39	1/1:0,2:2:3.01:32,3,0	./.	0/0:3,1:4:6.02:0,6,79	1/1:1,1:1:3.01:32,3,0	1/1:2,2:3:6.02:64,6,0	1/1:4,1:2:3.01:32,3,0
chr10	18392098	.	T	TA	2245.87	PASS	AB=0.752;AC=40;AF=0.714;AN=56;BaseQRankSum=-2.897;DP=250;FS=0.000;HRun=13;HaplotypeScore=27.5272;InbreedingCoeff=0.1141;MQ=55.15;MQ0=14;MQRankSum=0.120;QD=10.16;ReadPosRankSum=3.235;VQSLOD=1.7855;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,5:14:5.16:172,5,0	1/1:1,3:3:9.01:84,9,0	1/1:4,0:1:2.50:9,2,0	0/0:6,0:3:2.92:0,3,17	0/1:5,5:8:2.56:121,0,3	1/1:2,3:6:8.85:70,9,0	0/1:2,3:5:8.57:72,0,9	0/1:15,3:19:55.35:55,0,112	0/1:3,3:6:14.61:69,0,15	1/1:4,3:7:8.56:83,9,0	1/1:3,6:9:21.02:194,21,0	1/1:1,6:7:9.01:84,9,0	0/1:7,7:12:13.27:161,0,13	1/1:2,7:8:6.01:56,6,0	1/1:1,4:4:12.01:111,12,0	1/1:1,2:4:8.85:70,9,0	1/1:3,9:10:2.84:149,3,0	1/1:2,3:7:14.69:112,15,0	0/0:15,0:14:25.22:0,25,233	0/1:18,2:19:3.89:4,0,256	0/0:5,0:7:18.95:0,19,115	1/1:0,2:2:6.01:56,6,0	0/1:3,4:7:5.57:97,0,6	0/1:2,0:1:0:0,0,0	0/1:5,11:16:1.17:180,0,1	1/1:2,7:10:23.86:209,24,0	1/1:4,5:9:0.28:133,0,0	0/1:8,1:6:10.33:49,0,10
chr10	18396794	.	GAGCATCACAGTGT	G	8096.45	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=12.477;DP=755;FS=0.000;HRun=0;HaplotypeScore=294.1670;InbreedingCoeff=0.9320;MQ=76.18;MQ0=0;MQRankSum=-9.835;QD=31.02;ReadPosRankSum=2.873;VQSLOD=3.5269;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:56:99:0,114,6571	1/1:4,7:11:21.07:776,21,0	0/0:30,0:30:30.03:0,30,737	0/0:32,0:32:38.92:0,39,1330	1/1:14,15:29:5.77:132,6,0	0/0:27,0:27:57.20:0,57,3266	0/0:35,0:35:69.24:0,69,4024	0/0:44,0:44:72.25:0,72,3019	0/0:25,0:25:42.14:0,42,2456	1/1:21,12:33:36.12:1054,36,0	1/1:6,10:16:8.70:332,9,0	0/0:28,0:28:63.22:0,63,3750	1/1:12,11:23:24.08:886,24,0	1/1:14,9:23:12.04:420,12,0	0/0:36,0:36:66.23:0,66,3836	0/0:28,0:28:51.18:0,51,3153	1/1:12,8:20:12.04:443,12,0	0/0:11,0:11:24.08:0,24,1457	0/0:20,0:22:33.11:0,33,1595	0/0:24,0:34:9.39:0,9,375	0/0:39,0:51:17.62:0,18,547	0/0:18,0:18:42.14:0,42,2409	1/1:5,10:15:9.03:333,9,0	1/1:10,5:15:6.02:222,6,0	0/0:17,0:17:42.14:0,42,2494	1/1:17,15:31:42.14:1421,42,0	1/1:13,20:33:42.14:1525,42,0	1/1:5,6:11:15.05:554,15,0
chr10	18402604	.	T	TAAC	7437.12	PASS	AB=0.997;AC=38;AF=0.679;AN=56;BaseQRankSum=9.716;DP=443;FS=7.692;HRun=0;HaplotypeScore=88.0068;InbreedingCoeff=-0.1035;MQ=60.62;MQ0=2;MQRankSum=1.930;QD=17.83;ReadPosRankSum=4.641;VQSLOD=4.0077;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:12,0:12:56.72:57,0,94	1/1:2,2:4:6.49:120,6,0	0/0:6,0:6:2.99:0,3,99	0/0:10,0:7:7.12:0,7,94	1/1:7,24:32:58.16:814,58,0	0/1:24,0:25:99:106,0,271	0/1:6,0:6:3.73:4,0,85	0/1:29,0:29:66.11:66,0,794	0/1:13,0:13:23.74:24,0,98	1/1:4,18:23:7.66:681,8,0	1/1:2,24:26:56.54:862,57,0	0/1:9,0:9:45.55:46,0,63	1/1:4,15:19:17.91:354,18,0	1/1:1,10:11:24.02:467,24,0	0/0:10,0:10:0.70:0,1,172	0/1:11,0:11:20.34:20,0,90	1/1:9,14:23:28.76:864,29,0	0/1:9,0:9:20.63:21,0,174	0/1:23,0:21:99:125,0,294	0/1:15,0:15:99:142,0,162	0/1:11,0:11:19.51:20,0,61	1/1:6,0:7:1.15:126,1,0	1/1:2,15:17:14.18:466,14,0	1/1:1,4:6:9.03:178,9,0	0/1:27,0:27:92.69:93,0,291	1/1:6,21:27:59.96:969,60,0	1/1:3,18:21:29.48:576,29,0	1/1:1,9:10:12:238,12,0
chr10	18402607	.	T	TAACAACAAC	9602.13	PASS	AB=1.000;AC=51;AF=0.911;AN=56;BaseQRankSum=-0.135;DP=478;FS=0.000;HRun=0;HaplotypeScore=132.0278;InbreedingCoeff=0.4973;MQ=59.89;MQ0=2;MQRankSum=1.492;QD=20.83;ReadPosRankSum=2.377;VQSLOD=3.5448;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,0:12:24.03:437,24,0	1/1:5,0:5:8.54:50,9,0	0/0:7,0:7:8.14:0,8,185	0/0:9,0:7:5.78:0,6,173	1/1:31,0:31:59.20:374,59,0	1/1:9,16:29:30.10:1311,30,0	1/1:2,4:9:3.01:138,3,0	1/1:30,0:30:25.97:237,26,0	1/1:3,10:14:9.03:412,9,0	1/1:22,0:22:54.27:475,54,0	1/1:26,0:26:55.33:322,55,0	1/1:2,7:12:15.05:687,15,0	1/1:20,0:20:19.76:118,20,0	1/1:15,0:15:29.93:186,30,0	1/1:4,6:10:3.01:137,3,0	1/1:2,7:12:9:413,9,0	0/1:23,0:23:5.03:213,0,5	1/1:6,3:15:9.03:413,9,0	1/1:12,0:24:39.99:409,40,0	1/1:4,0:18:32.67:409,33,0	1/1:3,0:11:6.02:139,6,0	1/1:3,6:9:21.07:609,21,0	1/1:19,0:19:24.79:140,25,0	1/1:6,0:6:8.51:45,9,0	1/1:9,19:30:30.10:1375,30,0	1/1:27,0:27:55.37:404,55,0	1/1:21,0:20:25.19:105,25,0	1/1:9,0:9:10.36:43,10,0
chr10	18407584	.	A	AAAAT	4155.06	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=4.983;DP=521;FS=1.501;HRun=0;HaplotypeScore=134.1840;InbreedingCoeff=0.0958;MQ=65.14;MQ0=1;MQRankSum=-4.905;QD=13.32;ReadPosRankSum=-7.837;VQSLOD=0.8100;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:35,0:35:99:183,0,426	0/1:12,0:12:61.25:61,0,74	0/0:9,0:9:8.62:0,9,188	0/0:10,0:9:6.02:0,6,96	0/1:21,0:21:99:106,0,261	0/0:20,0:20:57.19:0,57,933	0/0:10,0:10:27.08:0,27,424	1/1:34,0:34:48.16:889,48,0	0/0:16,0:16:48.15:0,48,746	0/0:30,0:30:24.25:0,24,645	0/0:21,0:21:6.44:0,6,234	0/0:10,0:10:27.09:0,27,445	0/1:21,0:21:91.60:127,0,92	0/1:15,0:15:90.65:91,0,133	0/0:11,0:11:27.05:0,27,380	0/0:13,0:13:24.08:0,24,391	0/1:27,0:27:17.92:18,0,280	0/0:22,0:22:48.14:0,48,704	1/1:9,16:26:60.18:1095,60,0	1/1:8,14:23:42.14:862,42,0	1/1:2,6:9:15.05:375,15,0	0/0:12,0:12:24.08:0,24,367	0/1:19,0:19:99:110,0,173	0/1:7,0:7:13.82:31,0,14	0/0:25,0:25:60.19:0,60,933	0/1:26,0:26:50.26:50,0,456	0/1:28,0:28:99:126,0,331	0/1:9,0:9:29.79:30,0,100
chr10	18407598	.	A	AAGAC	7081.10	PASS	AB=1.000;AC=30;AF=0.536;AN=56;BaseQRankSum=5.706;DP=541;FS=0.468;HRun=0;HaplotypeScore=154.1463;InbreedingCoeff=0.6392;MQ=58.09;MQ0=2;MQRankSum=-7.542;QD=19.78;ReadPosRankSum=1.674;VQSLOD=4.6487;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,27:40:33.11:791,33,0	1/1:8,0:14:15.05:261,15,0	0/0:12,0:9:12.02:0,12,147	0/0:7,0:4:2.60:0,3,10	1/1:16,0:17:24.06:404,24,0	0/0:22,0:22:39.04:0,39,395	0/0:15,0:15:9.06:0,9,276	0/0:31,0:31:27.09:0,27,424	0/0:19,0:19:33.10:0,33,500	1/1:31,0:31:41.72:485,42,0	1/1:19,0:19:27.03:289,27,0	0/0:12,0:12:18.93:0,19,214	1/1:20,0:20:39.13:681,39,0	1/1:18,0:18:36.12:601,36,0	0/0:10,0:10:3.08:0,3,224	0/0:13,0:13:30.07:0,30,309	1/1:32,0:32:50.99:656,51,0	0/1:25,0:25:39.40:39,0,398	0/1:23,0:23:99:111,0,155	0/1:16,0:16:99:228,0,110	0/1:12,0:12:99:104,0,153	0/0:15,0:15:19.08:0,19,321	1/1:16,0:17:27.07:437,27,0	1/1:8,0:8:12.04:211,12,0	0/0:27,0:27:21.08:0,21,390	1/1:31,0:31:65.78:791,66,0	1/1:26,0:27:48.13:763,48,0	1/1:8,0:7:15.04:228,15,0
chr10	18407616	.	G	GACAGACAG	10960.52	PASS	AB=0.964;AC=27;AF=0.482;AN=56;BaseQRankSum=-8.331;DP=580;FS=2.843;HRun=0;HaplotypeScore=199.4499;InbreedingCoeff=0.8548;MQ=60.44;MQ0=4;MQRankSum=-7.911;QD=35.02;ReadPosRankSum=-1.354;VQSLOD=4.5848;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:40,0:40:32.96:272,33,0	1/1:13,0:13:15:615,15,0	0/0:20,0:13:12.03:0,12,180	0/0:17,0:13:2.14:0,2,9	1/1:14,0:14:24.06:726,24,0	0/0:23,0:23:45.13:0,45,795	0/0:24,0:24:31.33:0,31,551	0/0:32,0:32:27.09:0,27,639	0/0:18,0:18:33.10:0,33,756	1/1:17,11:29:41.37:796,41,0	1/1:20,0:20:27.03:489,27,0	0/0:11,0:11:23.87:0,24,432	1/1:24,0:24:36.12:1432,36,0	1/1:19,0:19:33.11:1156,33,0	0/0:15,0:15:3.10:0,3,428	0/0:13,0:13:30.10:0,30,590	1/1:37,0:37:55.89:1280,56,0	0/1:26,0:26:39.25:39,0,821	0/0:22,0:22:26.53:0,27,401	0/0:17,0:17:22.40:0,22,352	0/0:16,0:16:26.53:0,27,373	0/0:17,0:17:19.11:0,19,585	1/1:14,0:14:27.08:785,27,0	1/1:10,0:10:6.49:246,6,0	0/0:21,0:21:21.14:0,21,735	1/1:32,0:32:56.82:1269,57,0	1/1:25,0:25:39.13:1415,39,0	1/1:9,0:8:15.04:440,15,0
chr10	18407629	.	A	AC	444.96	PASS	AB=0.791;AC=11;AF=0.196;AN=56;BaseQRankSum=10.030;DP=588;FS=6.093;HRun=0;HaplotypeScore=173.1189;InbreedingCoeff=-0.1492;MQ=63.45;MQ0=4;MQRankSum=-9.433;QD=2.20;ReadPosRankSum=4.534;VQSLOD=2.1431;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:15.79:0,16,283	0/1:6,4:10:0.13:47,0,0	0/0:21,0:14:42.13:0,42,559	0/0:18,0:14:38.99:0,39,505	0/1:9,5:14:33.62:46,0,34	0/0:19,0:19:51.46:0,51,266	0/0:28,0:28:76.48:0,76,372	0/0:38,0:38:99:0,111,1538	0/0:17,0:17:51.17:0,51,713	0/1:19,2:21:7.97:8,0,174	0/1:18,2:20:48.69:49,0,120	0/0:15,0:15:43.05:0,43,233	0/1:13,11:24:46.48:111,0,46	0/1:13,8:21:71.36:71,0,72	0/0:19,0:19:30.57:0,31,239	0/0:14,0:14:36.96:0,37,183	0/0:39,3:42:4.53:0,5,237	0/0:31,0:30:65.11:0,65,419	0/0:19,0:19:57.18:0,57,764	0/0:17,0:17:49.32:0,49,595	0/0:17,0:17:45.15:0,45,625	0/0:16,0:16:29.10:0,29,206	0/1:12,4:16:26.49:26,0,58	0/1:9,2:11:14.27:14,0,31	0/0:23,0:23:41.52:0,42,285	0/1:24,6:30:81.49:81,0,199	0/1:19,7:26:82.98:83,0,140	0/1:6,3:8:15.55:54,0,16
chr10	18407630	.	A	AGACAGAC	7989.24	PASS	AB=0.825;AC=14;AF=0.250;AN=56;BaseQRankSum=1.708;DP=584;FS=3.776;HRun=0;HaplotypeScore=214.8387;InbreedingCoeff=-0.2591;MQ=62.54;MQ0=4;MQRankSum=-8.080;QD=28.23;ReadPosRankSum=0.127;VQSLOD=4.5884;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:38.06:0,38,504	0/1:5,4:9:3.85:410,0,4	0/0:19,0:13:39.13:0,39,913	0/0:18,0:14:38.42:0,38,732	0/1:9,5:14:30.06:643,0,30	0/0:19,0:19:8.15:0,8,756	0/0:29,0:29:30.76:0,31,776	0/0:39,0:39:99:0,111,2415	0/0:17,0:17:51.18:0,51,1352	0/1:20,2:22:99:478,0,138	0/1:18,2:20:99:392,0,132	0/0:16,0:16:20.93:0,21,488	0/1:13,11:24:62.25:1221,0,62	0/1:14,8:22:72.34:928,0,72	0/1:19,0:19:15.09:15,0,511	0/0:14,0:14:15.09:0,15,518	0/1:40,3:43:99:763,0,193	0/0:31,0:30:0.84:0,1,864	0/0:20,0:20:57.19:0,57,1240	0/0:16,0:16:48.11:0,48,849	0/0:17,0:17:45.15:0,45,1039	0/0:16,0:16:48.03:0,48,662	0/1:12,4:16:27.73:502,0,28	0/1:9,2:11:28.33:193,0,28	0/1:22,0:22:58.83:59,0,692	0/1:22,6:28:99:1093,0,176	0/1:18,7:26:99:983,0,156	0/1:4,3:6:2.92:309,0,3
chr10	18410594	.	CCTCTCCAGTGGTA	C	20993.28	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=18.943;DP=629;FS=4.375;HRun=0;HaplotypeScore=257.0217;InbreedingCoeff=0.9935;MQ=75.96;MQ0=0;MQRankSum=-17.638;QD=94.14;ReadPosRankSum=4.288;VQSLOD=4.0719;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,120,7500	1/1:0,14:14:39.09:1460,39,0	0/0:21,0:21:51.17:0,51,2430	0/0:14,0:14:39.13:0,39,2320	1/1:0,22:22:57.20:2180,57,0	0/0:19,0:18:57.20:0,57,3707	0/0:28,0:28:84.29:0,84,5080	0/0:30,0:30:84.28:0,84,4639	0/0:19,0:19:54.19:0,54,3508	1/1:4,22:26:66.21:2426,66,0	1/1:3,18:21:45.15:1813,45,0	0/0:26,0:26:75.24:0,75,4463	1/1:2,16:18:45.15:1815,45,0	1/1:3,16:19:51.17:2055,51,0	0/0:28,0:28:84.29:0,84,5396	0/0:29,0:29:87.30:0,87,5397	1/1:2,7:9:18.06:726,18,0	0/0:11,0:11:30.10:0,30,1938	0/0:19,0:19:57.20:0,57,3272	0/0:33,0:33:93.32:0,93,5702	0/0:29,0:29:78.23:0,78,4740	0/0:27,0:27:78.27:0,78,4988	1/1:2,22:24:53.68:2060,54,0	1/1:1,9:10:11.61:466,12,0	0/0:32,0:32:93.32:0,93,5487	1/1:4,17:21:51.17:1999,51,0	1/1:2,27:29:78.27:3146,78,0	1/1:1,9:10:21.07:847,21,0
chr10	18410996	.	AGGGGG	A	9388.48	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=10.196;DP=440;FS=2.995;HRun=11;HaplotypeScore=131.0290;InbreedingCoeff=0.9229;MQ=76.21;MQ0=0;MQRankSum=-11.656;QD=40.47;ReadPosRankSum=10.053;VQSLOD=1.9571;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:5,12:17:33.11:599,33,0	0/0:4,0:4:6.02:0,6,103	0/0:16,0:16:33.11:0,33,671	0/0:28,0:24:11.75:0,12,543	0/0:7,0:14:28.55:0,29,673	1/1:3,16:19:48.16:872,48,0	1/1:7,12:19:34.35:651,34,0	1/1:8,17:25:51.05:927,51,0	1/1:4,9:13:27.09:491,27,0	0/0:9,0:8:6.02:0,6,176	0/0:9,0:10:6.02:0,6,166	1/1:5,10:15:29.37:544,29,0	0/0:13,0:13:21.07:0,21,514	0/0:6,0:8:9.03:0,9,211	1/1:3,17:20:51.17:927,51,0	1/1:3,12:15:33.11:600,33,0	0/0:8,0:24:30.08:0,30,653	1/1:0,4:4:12:183,12,0	1/1:6,9:15:26.78:490,27,0	1/1:5,17:22:47.29:871,47,0	1/1:3,8:11:24.08:434,24,0	1/1:0,20:20:54.19:982,54,0	0/0:14,0:14:11.63:0,12,283	0/0:6,0:12:15.01:0,15,300	1/1:2,15:17:45.15:818,45,0	0/0:11,0:19:18.05:0,18,348	0/0:12,0:24:25.90:0,26,601	0/0:8,0:12:9.03:0,9,199
chr10	18413162	.	T	TC	2615.62	PASS	AC=22;AF=0.440;AN=50;BaseQRankSum=-7.014;DP=228;FS=2.637;HRun=7;HaplotypeScore=27.8295;InbreedingCoeff=0.8065;MQ=70.98;MQ0=0;MQRankSum=-2.281;QD=30.41;ReadPosRankSum=1.987;VQSLOD=3.3523;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:27.04:0,27,261	1/1:0,4:4:12.04:145,12,0	0/0:3,0:3:6.01:0,6,58	0/0:4,0:4:9.01:0,9,87	1/1:0,3:3:6.02:72,6,0	./.	0/0:27,0:27:69.07:0,69,654	0/0:5,0:5:9.01:0,9,87	0/0:6,0:6:18.03:0,18,174	1/1:1,5:6:18.04:205,18,0	./.	0/0:4,0:4:9.01:0,9,87	1/1:0,8:8:24.07:290,24,0	1/1:0,3:3:9.03:109,9,0	0/0:1,0:1:3:0,3,29	./.	1/1:2,18:20:54.17:652,54,0	0/0:17,0:17:39.06:0,39,377	0/0:10,0:10:21.02:0,21,198	0/0:2,0:2:3:0,3,29	0/0:41,0:41:99:0,101,964	0/0:4,0:4:12.02:0,12,116	1/1:2,4:6:18.05:211,18,0	1/1:2,20:22:57.17:688,57,0	0/0:6,0:6:15.02:0,15,145	1/1:1,10:11:30.09:362,30,0	1/1:0,2:2:3.01:36,3,0	1/1:0,1:1:3.01:36,3,0
chr10	18413828	.	ATTG	A	13680.12	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=3.404;DP=533;FS=4.027;HRun=0;HaplotypeScore=107.8816;InbreedingCoeff=0.9867;MQ=76.20;MQ0=1;MQRankSum=-4.811;QD=30.54;ReadPosRankSum=2.963;VQSLOD=5.2842;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:66.03:0,66,868	1/1:1,11:13:30:428,30,0	0/0:21,0:19:26.13:0,26,365	0/0:14,0:14:14.07:0,14,177	1/1:2,14:17:42.08:638,42,0	1/1:1,0:18:36.10:407,36,0	1/1:4,0:16:27.07:299,27,0	1/1:1,22:25:69.02:953,69,0	0/0:21,0:21:63.19:0,63,1196	1/1:1,21:22:63.19:1010,63,0	1/1:0,15:16:45.01:640,45,0	1/1:0,0:12:24.07:270,24,0	1/1:1,15:16:33.11:560,33,0	1/1:2,21:24:45.15:742,45,0	1/1:1,0:16:36.10:409,36,0	1/1:0,0:24:57.08:623,57,0	1/1:1,26:27:48.16:813,48,0	1/1:0,0:13:24.03:259,24,0	1/1:3,16:20:53.93:694,54,0	1/1:3,23:28:65.99:902,66,0	1/1:2,12:16:18.06:272,18,0	1/1:1,0:19:48.01:497,48,0	1/1:1,14:15:20.98:341,21,0	1/1:1,19:21:48.16:798,48,0	1/1:0,0:16:36.10:407,36,0	1/1:0,17:17:42.10:634,42,0	1/1:2,23:25:38.20:797,38,0	1/1:0,11:12:18.06:288,18,0
chr10	18413831	.	G	GT	328.50	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=-4.610;DP=555;FS=6.446;HRun=12;HaplotypeScore=149.6809;InbreedingCoeff=0.6128;MQ=72.18;MQ0=1;MQRankSum=4.017;QD=6.44;ReadPosRankSum=0.085;VQSLOD=1.1395;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:9,27:37:44.91:423,45,0	0/0:15,0:15:22.19:0,22,68	0/0:19,0:16:4.20:0,4,25	0/1:14,0:14:2.57:3,0,49	0/0:23,0:23:28.50:0,29,88	0/0:17,0:17:25.87:0,26,77	0/0:12,0:12:18.23:0,18,55	0/0:25,0:25:37.33:0,37,113	0/0:20,0:21:27.37:0,27,309	0/0:22,0:22:40.42:0,40,123	0/0:20,0:20:25.51:0,26,77	0/0:12,0:12:17.40:0,17,53	0/0:18,0:18:26.21:0,26,80	0/0:24,0:24:35.51:0,36,108	0/0:15,0:15:26.64:0,27,81	0/0:24,0:24:37.74:0,38,116	0/0:28,0:28:35.49:0,35,109	0/0:13,0:13:15.54:0,16,47	0/0:19,0:19:26.18:0,26,79	0/0:30,0:30:37.20:0,37,113	0/0:15,0:15:13.11:0,13,40	0/0:18,0:18:25.50:0,26,75	0/0:15,0:15:12.48:0,12,38	0/0:21,0:21:35.51:0,36,109	0/0:16,0:16:26.64:0,27,81	0/0:21,0:21:26.35:0,26,80	0/0:27,0:27:37.53:0,38,114	0/0:14,0:14:13.27:0,13,41
chr10	18415666	.	A	AAATCAATC	12753.64	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-4.380;DP=642;FS=0.411;HRun=0;HaplotypeScore=154.8838;InbreedingCoeff=0.9908;MQ=58.86;MQ0=1;MQRankSum=-13.217;QD=55.21;ReadPosRankSum=-3.831;VQSLOD=4.1297;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,102,2488	1/1:9,3:13:15.05:606,15,0	0/0:39,0:36:36.11:0,36,721	0/0:34,0:33:47.98:0,48,859	1/1:10,9:22:33.11:1226,33,0	0/0:22,0:22:51.17:0,51,1228	0/0:19,0:19:36.12:0,36,910	0/0:28,0:28:45.15:0,45,984	0/0:23,0:23:45.13:0,45,971	1/1:12,12:26:51.15:1776,51,0	1/1:13,9:22:27.09:1041,27,0	0/0:12,0:12:24.08:0,24,580	1/1:10,8:19:33.10:1240,33,0	1/1:8,2:11:15.05:541,15,0	0/0:35,0:35:66.21:0,66,1574	0/0:25,0:25:48.16:0,48,1170	1/1:13,5:20:15.05:599,15,0	0/0:10,0:10:24.08:0,24,608	0/0:17,0:17:24.08:0,24,582	0/0:20,0:20:45.15:0,45,1091	0/0:30,0:30:54.17:0,54,1301	0/0:23,0:23:51.18:0,51,1267	1/1:11,7:18:24.08:794,24,0	1/1:13,3:18:18.06:684,18,0	0/0:30,0:30:81.20:0,81,1928	1/1:13,7:23:42.14:1397,42,0	1/1:14,11:24:39.13:1610,39,0	1/1:4,10:14:30.10:1240,30,0
chr10	18417334	.	A	AG	431.12	PASS	AB=0.930;AC=8;AF=0.143;AN=56;BaseQRankSum=8.521;DP=497;FS=7.229;HRun=0;HaplotypeScore=87.0096;InbreedingCoeff=-0.1407;MQ=43.57;MQ0=28;MQRankSum=-4.294;QD=2.76;ReadPosRankSum=1.672;VQSLOD=1.6284;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:28:64.80:0,65,530	0/0:3,0:2:1.82:0,2,5	0/0:8,0:2:5.23:0,5,44	0/0:12,0:6:9.18:0,9,53	0/1:20,0:20:26.26:26,0,120	0/0:18,0:18:38.13:0,38,253	0/0:20,0:17:37.59:0,38,229	0/0:33,0:31:76.22:0,76,606	0/0:10,0:10:28.16:0,28,246	0/1:14,11:25:99:297,0,127	0/1:12,0:12:12.63:13,0,73	0/0:16,0:16:20.21:0,20,138	0/0:14,0:12:20.57:0,21,157	0/0:14,0:12:14.16:0,14,107	0/0:16,0:16:40.14:0,40,267	0/0:23,0:21:33.96:0,34,217	0/1:24,1:19:14.07:14,0,52	0/0:15,0:12:23.52:0,24,170	0/0:23,0:22:62.21:0,62,583	0/0:24,0:23:67.62:0,68,481	0/0:9,0:7:14.60:0,15,109	0/0:13,0:13:20.73:0,21,143	0/1:13,0:12:6.52:7,0,69	0/1:9,0:7:14.03:14,0,103	0/0:17,0:17:38.66:0,39,286	0/1:23,1:25:99:144,0,173	0/0:19,0:15:26.68:0,27,186	0/1:22,4:24:46.45:46,0,352
chr10	18417343	.	A	AAAGAAGAAGAAGAAGAAGAAG	8069.06	PASS	AB=1.000;AC=24;AF=0.429;AN=56;BaseQRankSum=-3.492;DP=506;FS=0.473;HRun=0;HaplotypeScore=233.9184;InbreedingCoeff=0.2463;MQ=47.98;MQ0=19;MQRankSum=-5.068;QD=26.46;ReadPosRankSum=3.055;VQSLOD=3.4138;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:31:73.58:0,74,1625	1/1:5,0:4:2.22:7,2,0	0/0:8,0:2:5.51:0,6,73	0/1:15,0:9:8.63:9,0,258	1/1:17,0:17:5.01:579,5,0	0/0:16,0:16:29.67:0,30,1001	0/0:21,0:18:30.17:0,30,712	0/1:34,0:32:93.12:93,0,748	0/0:8,0:8:23.89:0,24,452	1/1:26,0:25:32.49:2889,32,0	1/1:10,0:10:2.91:254,3,0	0/0:16,0:16:18.29:0,18,344	0/0:17,0:15:11.53:0,12,68	1/1:15,0:13:1.09:13,1,0	0/0:15,0:15:38.77:0,39,947	0/0:23,0:22:22.54:0,23,850	0/1:26,0:22:16.29:259,0,16	0/0:12,0:10:20.89:0,21,385	0/1:27,0:26:99:130,0,448	0/1:23,0:23:53.12:53,0,824	0/1:10,0:8:35.77:36,0,241	0/0:14,0:14:32.97:0,33,641	1/1:4,7:25:1.04:264,1,0	1/1:8,0:7:14.75:565,15,0	0/0:17,0:17:29.74:0,30,653	1/1:26,0:26:10.25:1789,10,0	0/1:17,0:14:33.11:244,0,33	0/1:21,0:19:36.75:885,0,37
chr10	18417345	.	A	AG	134.28	PASS	AB=0.775;AC=3;AF=0.054;AN=56;BaseQRankSum=2.703;DP=492;FS=1.642;HRun=0;HaplotypeScore=94.9929;InbreedingCoeff=0.1042;MQ=48.90;MQ0=18;MQRankSum=2.379;QD=2.32;ReadPosRankSum=2.240;VQSLOD=2.4961;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:35:75.79:0,76,631	0/0:6,0:5:1.55:0,2,4	0/0:9,0:2:5.61:0,6,49	0/0:15,0:9:11.35:0,11,85	0/0:16,0:16:9.75:0,10,42	0/0:16,0:16:29.52:0,30,221	0/0:20,0:17:38.20:0,38,242	0/0:32,1:31:33.74:0,34,244	0/0:10,0:10:22.11:0,22,190	0/0:27,0:26:57.76:0,58,270	0/0:7,0:7:2.22:0,2,7	0/0:17,0:17:17.31:0,17,109	0/0:16,0:14:10.99:0,11,72	0/0:16,0:14:5.56:0,6,31	0/0:16,0:16:36.47:0,36,243	0/0:24,0:23:25.14:0,25,181	0/0:25,0:22:14.37:0,14,64	0/0:12,0:10:20.46:0,20,130	0/1:24,3:26:10.92:11,0,239	0/1:10,11:21:5.82:186,0,6	0/1:7,3:8:33.16:33,0,33	0/0:13,0:13:32.17:0,32,192	0/0:20,0:20:5.70:0,6,20	0/0:8,0:7:10.96:0,11,68	0/0:15,0:15:29.73:0,30,225	0/0:25,0:25:47.62:0,48,203	0/0:14,0:12:11.04:0,11,60	0/0:17,0:15:31.79:0,32,138
chr10	18417346	.	A	AAAAGAAGAAGAAGAAGAAGAAGAAG	13436.53	PASS	AB=0.739;AC=26;AF=0.464;AN=56;BaseQRankSum=-5.936;DP=539;FS=3.641;HRun=0;HaplotypeScore=246.2154;InbreedingCoeff=0.3903;MQ=49.38;MQ0=18;MQRankSum=-5.244;QD=39.29;ReadPosRankSum=-0.983;VQSLOD=3.8283;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:34:46.71:0,47,1874	1/1:1,0:5:3.01:315,3,0	0/1:9,0:2:8.47:8,0,49	0/0:16,0:10:9.64:0,10,302	1/1:5,0:31:15.44:800,15,0	0/0:3,0:17:3.89:0,4,893	0/0:10,0:18:18.33:0,18,523	0/1:32,0:31:92.23:92,0,524	0/0:10,0:10:17.81:0,18,488	1/1:27,0:27:68.38:3742,68,0	1/1:0,1:28:8.93:421,9,0	0/0:4,0:16:5.46:0,5,265	0/1:5,0:13:3.71:8,0,4	0/1:4,0:13:2.78:3,0,10	0/0:10,0:15:21.62:0,22,724	0/0:6,0:23:7.90:0,8,759	1/1:4,0:21:13.62:991,14,0	0/0:11,0:10:12.62:0,13,251	0/1:23,0:25:99:175,0,462	0/1:11,0:22:0.56:1,0,811	0/1:4,0:8:60.99:61,0,235	0/0:3,0:14:23.45:0,23,469	1/1:19,0:20:3.88:332,4,0	0/1:4,0:15:3.65:923,0,4	0/0:6,0:16:16.57:0,17,508	1/1:4,0:26:49.72:3173,50,0	1/1:4,0:18:2.11:327,2,0	1/1:12,0:13:12.64:2064,13,0
chr10	18417590	.	GA	G	11375.04	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-5.339;DP=624;FS=1.164;HRun=10;HaplotypeScore=72.7878;InbreedingCoeff=0.9814;MQ=69.36;MQ0=1;MQRankSum=-3.498;QD=20.80;ReadPosRankSum=3.965;VQSLOD=5.7183;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:1,0:18:39.80:0,40,199	1/1:0,5:5:11.99:104,12,0	0/0:19,0:15:14.23:0,14,168	0/0:24,0:21:40.73:0,41,399	1/1:4,26:31:68.97:598,69,0	1/1:2,23:25:65.98:573,66,0	1/1:5,14:19:38.97:339,39,0	1/1:3,27:30:74.84:629,75,0	0/0:15,1:16:16.03:0,16,389	1/1:1,20:21:56.93:487,57,0	1/1:3,21:24:56.97:495,57,0	1/1:3,18:22:53.02:449,53,0	1/1:3,18:21:47.99:417,48,0	1/1:2,22:24:56.99:495,57,0	1/1:2,18:20:44.99:391,45,0	1/1:3,21:24:50.99:443,51,0	1/1:2,32:34:86.97:755,87,0	1/1:1,13:14:38.99:338,39,0	1/1:0,16:16:44.94:376,45,0	1/1:4,28:32:77.86:667,78,0	1/1:1,27:28:71.99:625,72,0	1/1:6,16:22:22.12:319,22,0	1/1:1,24:25:59.85:521,60,0	1/1:2,13:15:38.99:339,39,0	1/1:2,23:25:53.99:469,54,0	1/1:1,22:23:62.96:543,63,0	1/1:3,31:35:83.88:719,84,0	1/1:1,11:12:32.99:286,33,0
chr10	18418829	.	GCACACACACACA	G	4026.88	PASS	AB=0.770;AC=20;AF=0.357;AN=56;BaseQRankSum=2.383;DP=394;FS=0.000;HRun=0;HaplotypeScore=147.3766;InbreedingCoeff=0.6404;MQ=50.42;MQ0=19;MQRankSum=-7.150;QD=25.81;ReadPosRankSum=1.927;VQSLOD=2.8227;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:13:19.31:0,19,500	1/1:3,1:4:3.01:83,3,0	0/0:25,0:5:2.81:0,3,67	0/0:29,0:6:2.95:0,3,50	1/1:11,10:21:15.05:492,15,0	0/0:8,0:10:3.01:0,3,104	0/0:8,0:11:12.04:0,12,345	0/0:17,0:16:15.93:0,16,397	0/0:5,0:10:15.05:0,15,384	1/1:12,2:13:6.02:207,6,0	1/1:13,5:18:12.04:412,12,0	0/0:10,0:21:36.12:0,36,1045	1/1:4,7:11:21.07:724,21,0	1/1:4,5:9:12.04:414,12,0	0/0:6,0:11:18.06:0,18,572	0/0:9,0:11:18.06:0,18,555	0/0:9,0:9:0.47:0,0,1	0/0:3,0:4:5.98:0,6,132	0/0:8,0:10:14.41:0,14,334	0/0:11,0:21:27.56:0,28,950	0/0:8,0:8:12.04:0,12,344	0/0:9,0:10:9.03:0,9,409	0/1:11,0:17:21.26:91,0,21	0/1:9,3:11:66.25:66,0,141	0/0:6,0:12:18.53:0,19,688	1/1:12,3:14:9.03:310,9,0	1/1:13,7:21:27.09:871,27,0	1/1:10,3:12:12.04:356,12,0
chr10	18418900	.	TCTTTA	T	5595.65	PASS	AB=1.000;AC=25;AF=0.446;AN=56;BaseQRankSum=5.309;DP=321;FS=0.581;HRun=0;HaplotypeScore=98.3654;InbreedingCoeff=0.8760;MQ=50.31;MQ0=5;MQRankSum=-9.740;QD=40.84;ReadPosRankSum=1.611;VQSLOD=4.5131;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:27.09:0,27,771	1/1:0,4:4:6.02:128,6,0	0/0:27,0:12:32.47:0,32,775	0/1:14,0:9:14.24:14,0,369	1/1:3,16:19:39.13:814,39,0	0/0:9,0:9:27.09:0,27,840	0/0:9,0:9:24.08:0,24,749	0/0:14,0:14:27.09:0,27,741	0/0:6,0:6:18.06:0,18,538	1/1:2,4:6:12.04:255,12,0	1/1:1,10:11:30.10:638,30,0	0/0:17,0:17:42.14:0,42,1210	1/1:1,10:11:27.56:575,28,0	1/1:1,4:4:6.02:127,6,0	0/0:11,0:11:30.10:0,30,937	0/0:14,0:14:36.12:0,36,1020	1/1:2,6:8:18.02:339,18,0	0/0:7,0:7:18.06:0,18,564	0/0:10,0:7:15.05:0,15,454	0/0:21,0:21:60.21:0,60,1784	0/0:4,0:4:9.01:0,9,209	0/0:5,0:4:12.04:0,12,375	1/1:1,8:9:24.04:453,24,0	1/1:0,8:8:18.02:339,18,0	0/0:21,0:21:54.15:0,54,1523	1/1:2,8:9:21.07:447,21,0	1/1:3,16:19:36.12:766,36,0	1/1:2,11:13:33.11:702,33,0
chr10	18419381	.	GTATATATATATATATATATATATATATATATATATATATATA	G	1875.17	PASS	AB=0.882;AC=21;AF=0.750;AN=28;BaseQRankSum=2.756;DP=268;FS=0.000;HRun=0;HaplotypeScore=146.2568;InbreedingCoeff=0.2765;MQ=39.60;MQ0=22;MQRankSum=-1.408;QD=15.76;ReadPosRankSum=1.531;VQSLOD=2.6644;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:9.01:0,9,293	1/1:1,2:1:3.01:316,3,0	1/1:8,0:2:2.84:13,3,0	0/0:6,0:1:0.89:0,1,2	0/1:13,2:10:0:0,0,0	1/1:11,2:11:3.01:316,3,0	./.	1/1:16,0:10:3.01:60,3,0	./.	1/1:6,3:8:2.95:19,3,0	./.	./.	1/1:4,4:7:3.01:316,3,0	./.	1/1:6,0:8:3.01:253,3,0	./.	1/1:10,0:5:3.01:42,3,0	0/0:4,0:3:3.01:0,3,40	./.	./.	./.	./.	./.	./.	./.	1/1:7,2:7:3.01:316,3,0	1/1:12,6:10:3.01:316,3,0	./.
chr10	18419992	.	A	AT	11359.43	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-6.775;DP=361;FS=3.940;HRun=3;HaplotypeScore=32.7902;InbreedingCoeff=0.8741;MQ=73.53;MQ0=0;MQRankSum=-3.786;QD=34.42;ReadPosRankSum=1.810;VQSLOD=4.6744;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:24.07:0,24,287	1/1:1,5:6:9.03:126,9,0	0/0:5,0:5:8.92:0,9,88	0/0:7,0:7:20.08:0,20,209	1/1:2,21:23:63.17:860,63,0	1/1:1,18:18:45.15:630,45,0	1/1:0,8:8:24.08:336,24,0	1/1:2,31:33:93.30:1284,93,0	0/0:9,0:9:18.05:0,18,216	1/1:2,14:16:42.11:553,42,0	1/1:3,11:14:30.10:420,30,0	1/1:2,4:6:15.05:205,15,0	1/1:0,9:9:24.08:336,24,0	1/1:1,9:10:24.08:336,24,0	1/1:0,11:11:33.11:462,33,0	1/1:1,4:5:12.04:168,12,0	1/1:1,33:34:78.26:1092,78,0	1/1:0,14:14:33.11:462,33,0	1/1:0,14:14:42.10:536,42,0	1/1:1,15:16:39.13:546,39,0	1/1:0,5:5:12.04:168,12,0	1/1:2,4:6:12.04:168,12,0	1/1:0,5:5:9.03:126,9,0	1/1:0,1:1:3.01:42,3,0	1/1:1,16:17:42.14:588,42,0	1/1:1,18:19:51.15:696,51,0	1/1:7,16:23:48.16:672,48,0	1/1:2,14:16:39.13:546,39,0
chr10	18420596	.	GT	G	4648.52	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=12.199;DP=662;FS=2.989;HRun=6;HaplotypeScore=68.7699;InbreedingCoeff=0.9931;MQ=75.26;MQ0=0;MQRankSum=-1.574;QD=28.00;ReadPosRankSum=2.583;VQSLOD=5.6967;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,135,1730	0/0:7,0:7:21.07:0,21,276	0/0:10,0:11:29.89:0,30,331	0/0:15,0:15:13.81:0,14,246	0/0:14,0:14:36.12:0,36,473	1/1:1,22:23:60.15:645,60,0	1/1:0,19:19:57.14:613,57,0	0/0:43,0:43:99:0,102,1319	0/0:16,0:16:48.16:0,48,628	0/0:32,0:32:90.29:0,90,1184	0/0:22,0:22:51.17:0,51,666	1/1:2,20:22:54.13:579,54,0	0/0:19,0:19:54.18:0,54,709	0/0:26,0:26:78.24:0,78,1012	1/1:0,20:20:51.13:548,51,0	1/1:1,30:31:75.19:806,75,0	0/0:46,0:46:99:0,132,1685	1/1:1,13:14:39.07:409,39,0	0/0:22,0:22:63.19:0,63,814	0/0:22,0:21:57.19:0,57,749	0/0:56,0:56:99:0,163,2113	1/1:0,20:20:60.09:630,60,0	0/0:25,0:25:69.70:0,70,907	0/0:28,0:28:84.27:0,84,1105	1/1:2,15:17:39.10:419,39,0	0/0:15,0:15:45.15:0,45,589	0/0:19,0:19:51.15:0,51,653	0/0:11,0:11:15.05:0,15,196
chr10	18420874	.	TCTCC	T	5569.46	PASS	AB=1.000;AC=25;AF=0.446;AN=56;BaseQRankSum=7.328;DP=370;FS=16.683;HRun=0;HaplotypeScore=65.2259;InbreedingCoeff=0.8891;MQ=54.99;MQ0=6;MQRankSum=-1.308;QD=28.42;ReadPosRankSum=-0.326;VQSLOD=3.1445;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:20:26.81:0,27,823	0/0:6,0:6:15.05:0,15,376	0/1:21,0:6:17.97:18,0,92	0/0:26,0:10:21.87:0,22,299	0/0:14,0:14:30.56:0,31,645	1/1:4,11:15:21.07:357,21,0	1/1:1,8:9:24.08:409,24,0	1/1:9,16:23:42.08:633,42,0	0/0:10,0:10:24.07:0,24,531	0/0:12,0:12:33.11:0,33,786	0/0:17,0:17:39.11:0,39,867	1/1:2,10:12:27.09:447,27,0	0/0:6,0:6:12.04:0,12,300	0/0:6,0:6:15.05:0,15,357	1/1:3,8:11:21.07:357,21,0	1/1:4,7:11:6.02:90,6,0	0/0:9,0:8:24.07:0,24,551	1/1:10,6:15:29.99:389,30,0	1/1:8,8:15:24.08:399,24,0	1/1:6,13:19:51.12:808,51,0	1/1:3,4:7:12.04:191,12,0	1/1:3,7:10:27.01:400,27,0	0/0:9,0:9:27.09:0,27,671	0/0:7,0:7:9.03:0,9,225	1/1:5,18:23:66.21:1072,66,0	0/0:13,0:13:33.11:0,33,826	0/0:9,0:9:24.07:0,24,519	0/0:10,0:10:21.07:0,21,521
chr10	18420922	.	C	CTTTCTTTTT	12964.29	PASS	AB=1.000;AC=44;AF=0.786;AN=56;BaseQRankSum=6.880;DP=359;FS=2.265;HRun=0;HaplotypeScore=154.7811;InbreedingCoeff=0.4515;MQ=54.33;MQ0=4;MQRankSum=-8.011;QD=43.07;ReadPosRankSum=-0.642;VQSLOD=4.6531;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:18.19:0,18,1487	1/1:6,0:6:12.04:288,12,0	0/0:9,0:6:1.27:0,1,184	0/0:20,0:12:12.68:0,13,405	0/1:18,0:16:11.49:694,0,11	1/1:14,0:13:20.92:282,21,0	1/1:11,0:9:17.99:595,18,0	1/1:17,0:12:19.20:257,19,0	0/0:4,0:4:12.03:0,12,260	1/1:16,0:16:37.34:881,37,0	1/1:21,0:21:51.11:1403,51,0	1/1:14,0:12:26.97:625,27,0	1/1:8,0:5:15.02:400,15,0	0/1:8,0:8:8.62:254,0,9	1/1:8,0:7:18.05:609,18,0	1/1:5,0:5:8.91:110,9,0	0/1:16,0:13:42.74:501,0,43	1/1:9,0:8:11:178,11,0	1/1:22,0:20:44.23:652,44,0	1/1:21,0:19:42.50:1364,43,0	1/1:1,0:1:2.98:21,3,0	1/1:3,4:9:15.04:374,15,0	1/1:13,0:13:27.05:715,27,0	1/1:7,0:5:9.03:248,9,0	1/1:25,0:22:44.93:1145,45,0	1/1:16,0:15:14.34:924,14,0	0/1:5,0:4:17.75:137,0,18	1/1:9,0:9:17.97:307,18,0
chr10	18421017	.	TCTTC	T	10023.99	PASS	AB=1.000;AC=51;AF=0.911;AN=56;BaseQRankSum=5.832;DP=494;FS=10.940;HRun=0;HaplotypeScore=76.4072;InbreedingCoeff=0.6309;MQ=62.26;MQ0=1;MQRankSum=1.365;QD=21.46;ReadPosRankSum=1.277;VQSLOD=3.6156;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,26:30:42.14:710,42,0	1/1:1,5:6:5.95:71,6,0	0/1:21,0:17:9.62:10,0,245	0/0:14,0:10:14.83:0,15,161	1/1:3,14:17:35.92:457,36,0	1/1:2,10:12:15.05:254,15,0	1/1:6,16:23:30.10:507,30,0	1/1:5,10:15:29.97:342,30,0	0/0:13,0:13:30.06:0,30,600	1/1:4,19:23:57.09:740,57,0	1/1:4,9:13:26.82:299,27,0	1/1:8,12:20:11.97:170,12,0	1/1:4,17:21:24.01:373,24,0	1/1:2,8:10:3.01:51,3,0	1/1:6,16:22:27.09:458,27,0	1/1:3,13:16:24.08:407,24,0	1/1:2,26:28:39.68:913,40,0	1/1:6,16:22:24.03:375,24,0	1/1:5,11:15:32.94:319,33,0	1/1:5,18:23:53.66:568,54,0	1/1:3,14:17:4.83:241,5,0	1/1:4,10:14:29.77:345,30,0	1/1:2,11:13:8.84:152,9,0	1/1:3,17:19:24.08:407,24,0	1/1:2,22:24:45.15:761,45,0	1/1:3,12:15:36.11:584,36,0	1/1:2,10:12:18.06:305,18,0	1/1:1,13:14:12.04:204,12,0
chr10	18421792	.	A	AT	737	PASS	AB=0.881;AC=4;AF=0.071;AN=56;BaseQRankSum=-0.661;DP=513;FS=0.704;HRun=10;HaplotypeScore=64.8425;InbreedingCoeff=0.4127;MQ=68.47;MQ0=0;MQRankSum=0.730;QD=11.34;ReadPosRankSum=0.487;VQSLOD=2.9252;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,35:39:59.45:822,59,0	0/0:5,0:5:8.99:0,9,74	0/0:13,1:13:7.89:0,8,89	0/0:11,0:8:8.67:0,9,60	0/1:16,2:19:14.01:14,0,300	0/0:17,0:17:32.93:0,33,270	0/0:26,0:26:68.90:0,69,566	0/0:34,0:34:59.86:0,60,492	0/0:16,0:16:41.91:0,42,342	0/0:11,0:11:23.96:0,24,197	0/0:10,0:10:26.95:0,27,218	0/0:18,0:18:29.77:0,30,246	0/0:12,0:12:26.96:0,27,222	0/0:15,0:15:32.93:0,33,268	0/0:20,0:20:40.75:0,41,325	0/1:5,1:6:13.97:14,0,105	0/0:38,1:39:63.80:0,64,721	0/0:30,1:31:48.92:0,49,608	0/0:10,0:11:20:0,20,154	0/0:14,0:15:34.97:0,35,276	0/0:26,0:28:58.96:0,59,474	0/0:8,0:8:17.96:0,18,148	0/0:14,0:14:38.94:0,39,317	0/0:31,0:31:89.90:0,90,739	0/0:22,0:22:56.93:0,57,468	0/0:8,0:8:17.95:0,18,148	0/0:23,0:22:47.91:0,48,394	0/0:8,0:8:17.97:0,18,148
chr10	18421911	.	TA	T	1665.10	PASS	AB=0.784;AC=48;AF=0.857;AN=56;BaseQRankSum=-3.182;DP=380;FS=21.935;HRun=14;HaplotypeScore=69.5706;InbreedingCoeff=0.5307;MQ=58.37;MQ0=16;MQRankSum=-0.446;QD=6.91;ReadPosRankSum=4.659;VQSLOD=0.7458;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,3:17:26.56:172,27,0	1/1:1,0:3:4.07:12,4,0	0/0:72,0:22:28.19:0,28,231	0/0:59,0:20:29.61:0,30,229	1/1:4,0:11:12.68:37,13,0	1/1:3,4:8:13.93:88,14,0	1/1:0,7:7:14.88:103,15,0	1/1:19,5:23:10.87:135,11,0	0/0:3,0:3:6.01:0,6,56	1/1:8,0:14:15.26:44,15,0	1/1:4,0:10:14.25:41,14,0	1/1:3,9:11:23.77:164,24,0	1/1:2,2:5:7.85:35,8,0	1/1:5,0:7:6.57:19,7,0	1/1:1,5:7:16.90:108,17,0	1/1:2,3:5:14.84:100,15,0	1/1:4,0:8:12.55:37,13,0	1/1:8,4:12:14.85:103,15,0	0/1:8,3:10:13.11:62,0,13	1/1:5,7:12:23.76:164,24,0	1/1:1,4:4:2.95:21,3,0	1/1:4,2:6:11.89:82,12,0	1/1:4,0:7:12.22:35,12,0	1/1:3,0:4:2.04:6,2,0	1/1:1,10:11:23.78:164,24,0	1/1:10,0:12:11.25:34,11,0	1/1:7,0:9:13.72:38,14,0	0/1:7,0:9:6.77:12,0,7
chr10	18421920	.	A	AAAAAC	626.03	PASS	AB=1.000;AC=10;AF=0.179;AN=56;BaseQRankSum=-6.985;DP=438;FS=12.760;HRun=0;HaplotypeScore=105.3339;InbreedingCoeff=0.1116;MQ=59.85;MQ0=27;MQRankSum=4.838;QD=6.66;ReadPosRankSum=-2.636;VQSLOD=0.8646;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:10,8:17:29.99:612,30,0	0/0:4,0:4:11.97:0,12,114	0/0:94,0:24:23.30:0,23,342	0/0:82,0:23:35.33:0,35,434	0/0:11,0:11:23.16:0,23,226	0/0:7,0:7:20.93:0,21,175	0/0:7,0:7:11.88:0,12,106	0/1:24,0:22:43.82:44,0,220	0/0:3,0:3:8.98:0,9,102	0/0:12,0:12:17.76:0,18,238	0/0:10,0:10:3.87:0,4,149	0/0:15,0:14:26.95:0,27,228	0/0:7,0:7:14.84:0,15,135	0/0:5,0:5:1.66:0,2,65	0/0:9,0:9:23.94:0,24,201	0/1:9,0:8:1.33:1,0,98	0/0:9,0:9:11.12:0,11,155	0/1:8,0:7:23.14:23,0,73	0/1:13,0:11:6.70:7,0,100	0/1:13,0:13:20.14:20,0,103	0/0:5,0:4:3:0,3,25	0/1:5,0:5:29.64:47,0,30	0/0:11,0:11:6.44:0,6,150	1/1:4,0:4:2.04:6,2,0	0/0:13,0:13:26.79:0,27,219	0/0:16,0:13:10.60:0,11,152	0/0:13,0:12:10.88:0,11,163	0/0:11,0:10:3.91:0,4,103
chr10	18421930	.	AAC	A	2635.96	PASS	AB=0.980;AC=41;AF=0.732;AN=56;BaseQRankSum=1.568;DP=416;FS=5.191;HRun=0;HaplotypeScore=75.5280;InbreedingCoeff=0.0283;MQ=51.65;MQ0=32;MQRankSum=-2.144;QD=10.76;ReadPosRankSum=7.018;VQSLOD=2.5063;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:17:4.52:141,5,0	1/1:4,0:4:11.96:94,12,0	0/0:85,0:18:29.12:0,29,472	0/0:86,0:23:46.50:0,47,674	0/1:11,0:11:25.78:123,0,26	1/1:9,0:9:20.81:154,21,0	0/1:8,0:7:0.14:69,0,0	0/1:18,0:17:14.19:177,0,14	1/1:3,0:3:6.81:45,7,0	0/1:9,0:9:4.01:131,0,4	0/1:10,0:10:3.94:110,0,4	1/1:17,0:16:25.47:192,25,0	1/1:6,1:8:14.97:126,15,0	1/1:4,0:4:5.98:46,6,0	1/1:10,0:10:23.79:177,24,0	1/1:9,0:8:5.51:112,6,0	0/1:9,1:9:2.66:66,0,3	1/1:6,0:4:11.77:74,12,0	0/1:15,0:12:7.55:74,0,8	1/1:9,0:9:3.03:100,3,0	1/1:4,0:3:5.83:33,6,0	0/1:3,0:3:15.28:35,0,15	1/1:9,2:10:17.99:170,18,0	1/1:3,0:3:2.94:18,3,0	0/1:14,1:15:6.48:171,0,6	0/1:12,0:9:1.63:96,0,2	1/1:10,0:10:15.16:176,15,0	0/1:7,0:6:3.41:75,0,3
chr10	18421931	.	ACC	A	5597.19	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-4.276;DP=411;FS=22.072;HRun=5;HaplotypeScore=66.4785;InbreedingCoeff=0.6864;MQ=51.93;MQ0=33;MQRankSum=0.118;QD=23.13;ReadPosRankSum=4.364;VQSLOD=1.9852;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,11:17:24.08:302,24,0	1/1:0,4:4:12.04:168,12,0	0/0:83,0:18:22.34:0,22,506	0/0:84,1:23:47.86:0,48,708	1/1:2,9:11:18.06:251,18,0	1/1:0,9:9:21.07:293,21,0	1/1:4,4:7:12.04:157,12,0	1/1:10,7:17:32.42:389,32,0	1/1:1,2:3:9.01:102,9,0	1/1:1,8:9:21.06:277,21,0	1/1:1,9:10:18.06:241,18,0	1/1:3,14:16:27.09:365,27,0	1/1:2,6:8:15.05:209,15,0	1/1:0,4:4:6.02:84,6,0	1/1:0,10:10:24.08:335,24,0	1/1:2,7:8:18.06:242,18,0	1/1:5,6:9:12.04:158,12,0	1/1:0,6:4:12.04:168,12,0	1/1:7,7:11:15.05:197,15,0	1/1:1,7:8:15.05:209,15,0	1/1:2,3:3:6.02:76,6,0	1/1:1,2:3:6.02:84,6,0	1/1:2,9:10:18.06:249,18,0	1/1:0,2:2:3.01:36,3,0	1/1:5,10:15:30.09:393,30,0	1/1:3,8:9:15.05:209,15,0	1/1:3,8:10:18.06:240,18,0	1/1:2,5:6:12.04:164,12,0
chr10	18421987	.	GC	G	4350.63	PASS	AC=48;AF=1.000;AN=48;DP=218;FS=0.000;HRun=4;HaplotypeScore=44.2421;InbreedingCoeff=-0.0275;MQ=24.73;MQ0=13;QD=22.66;VQSLOD=3.6172;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,8:9:12.04:142,12,0	1/1:0,7:7:18.06:215,18,0	./.	./.	1/1:0,10:9:12.04:143,12,0	1/1:0,9:9:18.05:213,18,0	1/1:0,8:6:9.03:108,9,0	1/1:2,9:9:27.08:323,27,0	1/1:0,3:3:9.03:108,9,0	1/1:1,8:8:21.06:249,21,0	1/1:1,14:13:27.08:322,27,0	1/1:2,9:10:12.04:144,12,0	1/1:0,9:9:18.05:213,18,0	1/1:1,3:4:6.02:72,6,0	1/1:1,7:8:12.04:144,12,0	1/1:0,6:6:15.05:179,15,0	./.	1/1:1,6:4:12.04:144,12,0	1/1:1,6:6:18.06:216,18,0	1/1:0,6:6:18.05:211,18,0	./.	1/1:0,4:4:12.04:143,12,0	1/1:1,11:11:15.05:177,15,0	1/1:0,2:2:6.02:70,6,0	1/1:0,8:8:18.05:208,18,0	1/1:0,8:7:15.05:180,15,0	1/1:0,12:11:27.08:322,27,0	1/1:1,4:4:9.03:108,9,0
chr10	18424612	.	C	CAG	3468.98	PASS	AB=0.997;AC=28;AF=0.500;AN=56;BaseQRankSum=9.999;DP=764;FS=23.856;HRun=0;HaplotypeScore=188.5975;InbreedingCoeff=-0.5720;MQ=63.46;MQ0=8;MQRankSum=-9.789;QD=5.30;ReadPosRankSum=-3.960;VQSLOD=1.2775;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:5,38:39:75.23:1209,75,0	0/1:19,0:19:45.60:121,0,46	0/0:52,0:29:28.12:0,28,231	0/1:62,0:36:6.18:6,0,293	0/1:23,0:23:56.45:56,0,184	0/1:17,0:17:12.39:115,0,12	0/1:26,0:25:48.06:96,0,48	0/1:51,0:48:24.10:24,0,623	0/0:40,0:42:99:0,99,1177	0/1:32,0:32:99:119,0,240	0/0:15,0:15:3.48:0,3,37	0/1:23,0:23:40.33:146,0,40	1/1:18,0:18:23.21:155,23,0	0/1:18,0:18:36.86:168,0,37	0/1:27,0:27:53.23:108,0,53	0/1:21,0:21:95.42:196,0,95	0/1:25,0:26:12.97:109,0,13	0/1:23,0:23:44.74:45,0,88	0/1:22,0:19:26.44:26,0,192	0/1:24,0:25:72.02:72,0,193	0/1:22,0:22:28.04:28,0,75	0/1:26,0:26:52.72:76,0,53	0/1:20,0:20:48.44:48,0,171	0/1:16,0:16:51.94:84,0,52	1/1:15,0:15:26.22:179,26,0	0/1:37,0:37:90.85:91,0,388	0/1:27,0:27:32.47:169,0,32	0/1:11,0:12:21.72:22,0,146
chr10	18424624	.	G	GAGAGAC	16885.45	PASS	AB=1.000;AC=47;AF=0.839;AN=56;BaseQRankSum=-4.680;DP=849;FS=5.723;HRun=0;HaplotypeScore=188.1650;InbreedingCoeff=0.6684;MQ=59.80;MQ0=12;MQRankSum=-8.210;QD=24.58;ReadPosRankSum=-0.771;VQSLOD=3.7632;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:40:57.49:0,57,230	1/1:4,14:18:27.09:836,27,0	0/0:56,0:21:0.46:0,0,172	0/1:75,0:34:11.06:11,0,170	1/1:9,15:27:11.95:400,12,0	1/1:3,18:24:21.07:700,21,0	1/1:8,19:26:17.34:541,17,0	1/1:44,0:42:72.14:1006,72,0	0/0:42,0:42:96.27:0,96,1838	1/1:8,22:30:53.99:1319,54,0	0/0:3,16:20:0.47:0,0,1	1/1:2,22:25:26.93:843,27,0	1/1:1,17:20:23.92:799,24,0	1/1:3,14:21:30.10:887,30,0	1/1:7,23:34:24.08:765,24,0	1/1:5,20:25:38.93:1219,39,0	1/1:6,21:29:21.07:634,21,0	1/1:8,18:28:7.14:274,7,0	1/1:6,12:20:36:652,36,0	1/1:12,15:29:17.82:423,18,0	1/1:7,16:24:6.02:144,6,0	1/1:5,29:35:12.42:495,12,0	1/1:9,16:26:11.88:399,12,0	1/1:17,1:18:26.99:543,27,0	1/1:1,14:16:27.09:844,27,0	1/1:8,31:41:84.19:1693,84,0	1/1:7,22:32:36.12:1149,36,0	1/1:14,0:14:23.94:310,24,0
chr10	18424774	.	GAC	G	2776.45	PASS	AB=0.949;AC=24;AF=0.429;AN=56;BaseQRankSum=-4.632;DP=740;FS=7.975;HRun=0;HaplotypeScore=199.0756;InbreedingCoeff=0.7038;MQ=46.31;MQ0=30;MQRankSum=0.858;QD=8.05;ReadPosRankSum=-2.674;VQSLOD=2.0525;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:32,0:30:2.33:2,0,216	0/0:14,0:14:17.77:0,18,108	0/0:56,1:11:20.61:0,21,181	0/1:86,1:10:1.71:16,0,2	0/0:32,0:30:41.19:0,41,266	1/1:2,19:21:17.93:193,18,0	1/1:9,10:18:24.03:273,24,0	1/1:28,1:29:70.01:584,70,0	0/0:28,0:28:75.10:0,75,1156	0/0:28,0:28:43.04:0,43,260	0/0:22,0:22:26.63:0,27,188	1/1:7,4:11:23.87:203,24,0	0/0:26,0:26:26.22:0,26,155	0/0:13,0:13:8.81:0,9,68	1/1:15,4:19:26.79:228,27,0	1/1:9,8:17:27.77:224,28,0	0/0:35,0:35:8.47:0,8,73	0/1:15,3:18:9.25:202,0,9	1/1:20,0:16:7.52:224,8,0	1/1:18,0:18:41.95:354,42,0	0/1:23,1:23:54.63:200,0,55	1/1:1,15:15:5.99:66,6,0	0/0:26,0:26:41.12:0,41,259	0/0:34,0:33:3.74:0,4,44	1/1:10,3:13:26.83:213,27,0	0/0:29,0:29:64.76:0,65,457	0/0:30,0:29:35.37:0,35,278	0/0:21,0:20:19.42:0,19,102
chr10	18424776	.	CAGAGAGAGAGAGAGAGAGCGAG	C	10401.35	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=3.238;DP=737;FS=3.136;HRun=0;HaplotypeScore=315.0909;InbreedingCoeff=0.8971;MQ=45.47;MQ0=33;MQRankSum=-4.924;QD=34.44;ReadPosRankSum=3.593;VQSLOD=3.2692;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:29:41.81:0,42,776	1/1:0,14:14:27.09:1129,27,0	0/0:58,0:11:11.99:0,12,144	0/0:92,0:9:9.49:0,9,121	1/1:7,25:30:24.08:984,24,0	0/0:21,0:21:17.89:0,18,842	0/0:21,0:20:15.05:0,15,546	0/0:30,0:29:29.82:0,30,581	0/0:27,0:27:63.22:0,63,3930	1/1:3,25:28:57.20:1871,57,0	1/1:5,16:21:18.06:668,18,0	0/0:11,0:11:24.08:0,24,824	1/1:4,22:26:18.06:836,18,0	1/1:1,11:12:9.03:394,9,0	0/0:18,0:18:26.24:0,26,454	0/0:16,0:16:29.91:0,30,818	1/1:6,28:34:5.51:164,6,0	0/0:17,0:18:29.93:0,30,812	0/0:19,0:15:32.70:0,33,964	0/0:16,0:16:11.74:0,12,203	0/0:24,0:23:42.62:0,43,1980	0/0:16,0:15:5.38:0,5,245	1/1:3,22:25:33.11:1391,33,0	1/1:10,23:32:1.52:64,2,0	0/0:14,0:14:11.87:0,12,250	1/1:9,19:28:51.15:1354,51,0	1/1:8,20:27:15.05:757,15,0	1/1:6,15:20:15.05:791,15,0
chr10	18424785	.	AGAGAGAGAGC	A	4527.02	PASS	AB=0.999;AC=35;AF=0.625;AN=56;BaseQRankSum=7.075;DP=761;FS=2.352;HRun=0;HaplotypeScore=229.3506;InbreedingCoeff=0.3297;MQ=42.20;MQ0=49;MQRankSum=-3.680;QD=8.38;ReadPosRankSum=-0.863;VQSLOD=3.7044;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:26,4:29:50.26:827,50,0	1/1:14,0:14:27.02:354,27,0	0/0:84,0:8:1.16:0,1,29	0/1:112,0:10:35.59:75,0,36	1/1:29,0:27:24.07:272,24,0	0/0:25,0:25:11.05:0,11,228	0/0:25,0:24:12.88:0,13,174	0/1:28,0:27:42.14:42,0,107	0/0:29,0:29:75.24:0,75,2409	1/1:25,0:25:53.93:713,54,0	1/1:17,0:17:18.05:204,18,0	0/1:13,0:12:42.05:42,0,105	1/1:24,0:24:18.06:265,18,0	1/1:11,0:12:9.03:108,9,0	0/1:22,0:22:40.61:79,0,41	0/1:16,0:16:15.17:15,0,205	1/1:33,0:32:4.83:53,5,0	0/0:16,0:16:20.72:0,21,221	0/1:19,0:14:49.02:49,0,309	1/1:11,0:11:1.59:65,2,0	0/0:25,0:24:40.79:0,41,835	0/0:17,0:16:8.30:0,8,95	1/1:23,0:23:33.10:383,33,0	1/1:29,0:28:1.65:32,2,0	0/1:12,0:12:15.04:19,0,15	1/1:24,0:24:42.32:411,42,0	1/1:26,0:23:15.04:237,15,0	1/1:19,0:18:15.05:282,15,0
chr10	18424791	.	AGAGC	A	4939.91	PASS	AB=1.000;AC=49;AF=0.875;AN=56;BaseQRankSum=3.062;DP=769;FS=0.608;HRun=0;HaplotypeScore=187.9003;InbreedingCoeff=0.1757;MQ=45.40;MQ0=51;MQRankSum=-4.299;QD=6.68;ReadPosRankSum=-1.547;VQSLOD=3.6168;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:27,4:30:50.72:445,51,0	1/1:15,0:15:29.63:210,30,0	0/1:89,0:9:3.06:3,0,21	0/1:122,0:13:13.99:45,0,14	1/1:27,0:25:23.43:137,23,0	1/1:25,0:25:15.54:177,16,0	1/1:26,0:25:20.31:179,20,0	1/1:24,0:22:44.15:343,44,0	0/0:30,0:30:80.99:0,81,1414	1/1:25,0:25:48.80:409,49,0	1/1:17,0:17:17.58:103,18,0	1/1:15,0:14:32.92:373,33,0	1/1:22,0:22:17.67:113,18,0	1/1:12,0:12:2.59:32,3,0	1/1:24,0:24:32.91:286,33,0	1/1:17,1:18:27.42:340,27,0	1/1:31,0:30:4.77:24,5,0	1/1:16,0:16:3.09:258,3,0	0/1:22,0:17:35.56:287,0,36	1/1:11,0:11:12:115,12,0	0/1:26,0:25:99:122,0,161	1/1:15,2:16:9.74:134,10,0	1/1:22,0:22:32.21:189,32,0	1/1:27,0:26:1.77:16,2,0	1/1:12,1:13:18:172,18,0	1/1:21,0:21:40.23:247,40,0	0/1:23,0:20:9.14:61,0,9	1/1:17,0:16:14.92:121,15,0
chr10	18425470	.	CAAA	C	5120.93	PASS	AB=1.000;AC=27;AF=0.482;AN=56;BaseQRankSum=-6.637;DP=444;FS=0.822;HRun=14;HaplotypeScore=82.0924;InbreedingCoeff=0.9179;MQ=71.09;MQ0=0;MQRankSum=-4.247;QD=23.60;ReadPosRankSum=3.556;VQSLOD=4.2426;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,0:17:32.29:194,32,0	0/0:3,0:12:35.90:0,36,313	0/0:19,0:12:30.55:0,31,409	0/1:9,0:8:16.48:16,0,41	0/0:5,0:29:80.68:0,81,663	1/1:1,15:17:39.05:438,39,0	1/1:2,9:14:22.43:243,22,0	1/1:6,18:24:54.06:621,54,0	0/0:13,0:13:30.10:0,30,559	0/0:4,0:20:47.84:0,48,388	0/0:10,0:24:56.41:0,56,577	1/1:1,12:13:33.07:386,33,0	0/0:8,0:12:29.97:0,30,287	0/0:7,0:10:20.95:0,21,199	1/1:4,15:19:37.45:453,37,0	1/1:2,6:8:15.04:175,15,0	0/0:3,0:15:41.85:0,42,325	1/1:1,17:18:42.11:491,42,0	1/1:1,12:13:33.08:385,33,0	1/1:4,22:26:54.01:631,54,0	1/1:1,9:10:24.06:281,24,0	1/1:2,12:14:33.06:386,33,0	0/0:7,1:23:9.20:0,9,289	0/0:3,0:9:20.93:0,21,163	1/1:2,13:15:36.04:420,36,0	0/0:1,0:13:38.81:0,39,299	0/0:5,0:17:41.45:0,41,339	0/0:0,0:11:29.89:0,30,229
chr10	18427070	.	AACAC	A	1428.74	PASS	AB=0.964;AC=28;AF=0.583;AN=48;BaseQRankSum=4.180;DP=468;FS=0.000;HRun=0;HaplotypeScore=83.3222;InbreedingCoeff=0.5494;MQ=76.13;MQ0=7;MQRankSum=2.168;QD=5.62;ReadPosRankSum=1.025;VQSLOD=1.5047;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:24:9.01:84,9,0	0/0:9,0:12:14.52:0,15,208	./.	./.	1/1:7,5:13:12.04:186,12,0	1/1:9,3:12:3.01:45,3,0	1/1:13,5:18:9.03:139,9,0	./.	0/1:9,0:9:13.08:13,0,66	0/0:15,0:16:11.78:0,12,219	0/0:8,0:12:11.38:0,11,138	1/1:14,1:19:6.01:74,6,0	0/1:12,1:13:38.29:77,0,38	1/1:10,5:15:9.03:139,9,0	1/1:10,2:16:9.02:121,9,0	1/1:14,0:14:2.97:20,3,0	0/0:17,0:19:23.82:0,24,451	1/1:11,0:9:2.96:20,3,0	./.	1/1:14,0:16:6:55,6,0	1/1:19,0:26:2.98:21,3,0	0/0:8,0:8:2.92:0,3,17	1/1:10,6:16:6.02:93,6,0	1/1:16,14:30:33.11:510,33,0	0/0:10,1:11:0.47:0,0,1	0/0:20,0:20:12.46:0,12,154	0/0:17,0:17:17.99:0,18,252	0/0:12,0:12:15.05:0,15,337
chr10	18428460	.	C	CGGG	823.54	PASS	AB=0.952;AC=3;AF=0.054;AN=56;BaseQRankSum=1.332;DP=419;FS=6.417;HRun=2;HaplotypeScore=86.0012;InbreedingCoeff=0.5060;MQ=46.43;MQ0=24;MQRankSum=-2.283;QD=16.47;ReadPosRankSum=1.320;VQSLOD=0.6472;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:13,17:28:7.21:904,7,0	0/0:8,0:8:18.06:0,18,279	0/0:16,0:3:2.55:0,3,11	0/1:19,0:7:7.83:8,0,89	0/0:16,0:15:30.10:0,30,453	0/0:14,0:12:24.08:0,24,369	0/0:12,0:10:30.10:0,30,463	0/0:14,0:12:31.26:0,31,488	0/0:13,0:13:27.09:0,27,436	0/0:15,0:15:30.09:0,30,441	0/0:7,0:6:14.97:0,15,215	0/0:15,0:15:27.08:0,27,406	0/0:11,0:11:33.11:0,33,516	0/0:14,0:11:33.08:0,33,483	0/0:13,0:13:30.10:0,30,489	0/0:16,0:14:39.09:0,39,597	0/0:30,0:30:67.58:0,68,1010	0/0:17,0:14:27.07:0,27,405	0/0:9,0:9:15.01:0,15,212	0/0:22,0:21:49.05:0,49,746	0/0:13,0:12:15.49:0,15,215	0/0:7,0:7:18.06:0,18,293	0/0:14,0:12:33.11:0,33,515	0/0:16,0:15:24.35:0,24,374	0/0:10,0:9:18.06:0,18,279	0/0:20,0:20:48.15:0,48,726	0/0:15,0:13:24.08:0,24,387	0/0:11,0:10:15.05:0,15,227
chr10	18430924	.	C	CT	6833.15	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-2.331;DP=311;FS=1.640;HRun=0;HaplotypeScore=62.1698;InbreedingCoeff=0.7259;MQ=72.74;MQ0=0;MQRankSum=-4.021;QD=25.69;ReadPosRankSum=2.442;VQSLOD=5.7369;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,2:11:12.49:104,12,0	1/1:0,1:1:3.01:42,3,0	0/0:22,0:16:40.44:0,40,374	0/0:14,0:11:13.70:0,14,146	1/1:0,5:5:8.98:104,9,0	1/1:0,9:9:21.04:270,21,0	1/1:5,15:20:50.89:651,51,0	1/1:12,16:28:58.65:785,59,0	0/0:9,0:9:18.03:0,18,216	1/1:0,11:11:29.93:340,30,0	1/1:3,3:7:7.44:123,7,0	1/1:3,9:12:23.84:283,24,0	1/1:0,9:9:12.03:162,12,0	1/1:1,9:10:15.05:207,15,0	1/1:7,13:20:47.95:575,48,0	1/1:4,7:11:29.59:334,30,0	1/1:2,15:17:34:462,34,0	1/1:5,6:11:32.95:351,33,0	1/1:5,6:12:26.90:264,27,0	1/1:2,3:5:9.03:125,9,0	1/1:8,10:18:30.09:410,30,0	1/1:2,2:4:8.96:101,9,0	1/1:0,1:1:3.01:42,3,0	1/1:3,8:11:8.17:159,8,0	1/1:3,1:4:5.99:62,6,0	1/1:1,4:5:8.96:85,9,0	1/1:0,10:10:27.09:376,27,0	1/1:3,11:14:30.10:418,30,0
chr10	18430932	.	AC	A	2622.29	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=6.660;DP=322;FS=0.503;HRun=7;HaplotypeScore=71.3904;InbreedingCoeff=0.8713;MQ=79.84;MQ0=0;MQRankSum=-8.747;QD=16.81;ReadPosRankSum=2.000;VQSLOD=3.5896;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:24.08:0,24,301	0/0:2,0:2:5.99:0,6,60	0/0:24,0:18:20.16:0,20,330	0/0:16,0:13:8.72:0,9,202	0/0:6,0:6:12.04:0,12,151	1/1:8,4:12:17.26:144,17,0	1/1:6,14:20:39.05:390,39,0	1/1:8,15:23:45.06:446,45,0	0/0:11,0:11:30:0,30,344	0/0:11,0:11:27.05:0,27,322	0/0:8,0:8:15.03:0,15,175	1/1:3,5:8:14.98:152,15,0	0/0:8,0:8:12.04:0,12,151	0/0:9,1:10:18.05:0,18,214	1/1:2,18:20:45.08:454,45,0	1/1:1,10:11:30.06:301,30,0	0/0:18,0:18:36.12:0,36,453	1/1:3,8:11:18.03:183,18,0	1/1:6,8:14:2.12:171,2,0	1/1:1,4:5:8.31:89,8,0	1/1:4,15:19:30.05:296,30,0	1/1:2,2:4:5.80:59,6,0	0/0:1,0:1:3.01:0,3,38	0/0:14,0:14:26.99:0,27,291	1/1:2,7:9:15.03:151,15,0	0/0:4,0:4:12.04:0,12,151	0/0:6,0:6:12.04:0,12,151	0/0:14,0:14:39.06:0,39,436
chr10	18432606	.	GATAATAATA	G	1527.44	PASS	AB=1.000;AC=25;AF=0.595;AN=42;BaseQRankSum=3.816;DP=205;FS=11.506;HRun=0;HaplotypeScore=76.3423;InbreedingCoeff=0.3014;MQ=69.25;MQ0=1;MQRankSum=0.164;QD=10.99;ReadPosRankSum=-2.874;VQSLOD=-0.0568;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:10,0:10:6.02:75,6,0	0/1:4,0:4:14.57:15,0,95	./.	./.	0/0:3,0:3:2.50:0,2,34	1/1:3,9:13:12.04:309,12,0	./.	1/1:12,0:23:0.94:2,1,0	0/0:9,0:10:9.03:0,9,327	0/1:3,0:3:0:0,0,0	0/0:6,0:6:7.42:0,7,154	1/1:4,1:5:3.01:82,3,0	0/0:8,0:8:14.94:0,15,206	./.	1/1:5,2:7:3.01:82,3,0	1/1:3,3:6:6.02:165,6,0	0/0:7,0:7:8.96:0,9,118	1/1:13,2:16:17.94:321,18,0	1/1:8,0:18:26.69:430,27,0	./.	1/1:3,0:3:3.01:51,3,0	./.	0/1:5,0:5:38.38:38,0,44	./.	1/1:2,2:4:3.01:54,3,0	0/0:5,0:5:8.99:0,9,137	0/1:9,0:9:12.32:12,0,139	0/1:13,0:13:33.73:34,0,96
chr10	18432641	.	TAATAATAAC	T	1130.60	PASS	AB=0.964;AC=18;AF=0.346;AN=52;BaseQRankSum=8.340;DP=200;FS=2.344;HRun=0;HaplotypeScore=80.9195;InbreedingCoeff=-0.3948;MQ=48.31;MQ0=1;MQRankSum=-6.285;QD=8.25;ReadPosRankSum=5.749;VQSLOD=0.9850;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:2,11:12:8.95:127,9,0	0/1:5,0:5:23.32:23,0,52	0/0:2,0:1:3:0,3,25	./.	0/1:2,0:3:11.71:12,0,12	0/1:12,0:12:29.94:230,0,30	0/0:4,0:4:11.99:0,12,101	0/0:22,0:22:38.85:0,39,316	0/0:8,0:8:24:0,24,447	0/1:3,0:3:15.21:22,0,15	0/1:6,0:6:6.86:7,0,93	0/1:6,0:6:46.47:46,0,105	0/0:5,0:5:13.47:0,13,116	./.	0/1:5,0:5:51.67:52,0,61	0/1:7,0:7:81.93:111,0,82	0/1:9,0:9:39.13:39,0,59	0/1:18,0:18:99:174,0,196	0/1:16,0:16:99:212,0,120	0/0:6,0:6:17.51:0,18,123	0/1:5,0:5:19.64:20,0,75	0/0:3,0:3:8.99:0,9,74	0/1:1,0:2:18.98:53,0,19	0/0:2,0:2:1.25:0,1,3	0/1:11,0:11:5.84:6,0,194	0/0:7,0:7:0.30:0,0,71	0/1:7,0:7:46.09:46,0,83	0/1:9,0:9:55.73:100,0,56
chr10	18432644	.	TAATAACAACAACAACAAC	T	2475.94	PASS	AC=20;AF=0.370;AN=54;BaseQRankSum=6.496;DP=211;FS=0.709;HRun=0;HaplotypeScore=110.6057;InbreedingCoeff=0.7932;MQ=49.14;MQ0=1;MQRankSum=-6.108;QD=41.27;ReadPosRankSum=1.183;VQSLOD=2.3537;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:8.94:0,9,157	1/1:5,0:5:8.96:197,9,0	0/0:3,0:2:6.02:0,6,247	0/0:5,0:1:3.01:0,3,173	1/1:4,0:4:3.01:96,3,0	0/0:12,0:12:18.06:0,18,633	0/0:4,0:4:12.04:0,12,642	0/0:25,0:25:51.18:0,51,1958	0/0:8,0:8:24.08:0,24,1259	1/1:3,0:3:9.03:284,9,0	1/1:5,1:6:11.73:169,12,0	0/0:6,0:6:18.06:0,18,790	1/1:5,0:5:11.78:150,12,0	./.	0/0:6,0:6:15.05:0,15,602	0/0:7,0:7:18.06:0,18,690	1/1:8,0:8:19.22:456,19,0	0/0:17,0:17:45.12:0,45,1714	0/0:16,0:16:38.92:0,39,1193	0/0:6,0:6:18.06:0,18,662	0/0:7,0:7:4.16:0,4,671	0/0:3,0:3:9.03:0,9,370	1/1:2,0:2:3.01:143,3,0	0/0:2,0:2:0:0,0,0	0/0:11,0:11:30.03:0,30,1228	1/1:8,0:8:15.40:284,15,0	1/1:7,0:7:11.93:307,12,0	1/1:8,4:12:17.94:581,18,0
chr10	18432650	.	CAACAACAACAACAATAACAAT	C	3207.19	PASS	AC=22;AF=0.407;AN=54;BaseQRankSum=6.727;DP=242;FS=1.414;HRun=0;HaplotypeScore=136.1377;InbreedingCoeff=0.8179;MQ=52.15;MQ0=1;MQRankSum=-7.338;QD=50.11;ReadPosRankSum=-0.122;VQSLOD=3.2020;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:12:9.03:0,9,228	1/1:4,1:5:8.96:241,9,0	0/0:5,0:4:9.03:0,9,359	0/0:6,0:2:6.02:0,6,416	1/1:6,0:6:3.01:94,3,0	0/0:13,0:13:21.07:0,21,1068	0/0:5,0:5:15.05:0,15,1053	0/0:28,0:28:60.21:0,60,2729	0/0:12,0:12:36.12:0,36,2262	1/1:2,1:3:9.03:399,9,0	1/1:7,0:7:11.73:182,12,0	0/0:6,0:6:18.06:0,18,1115	1/1:4,1:5:11.78:186,12,0	./.	0/0:5,0:5:15.05:0,15,839	0/0:8,0:8:21.07:0,21,1165	1/1:7,1:8:20.99:593,21,0	0/0:22,0:22:60.17:0,60,3152	0/0:21,0:21:53.97:0,54,2577	0/0:11,0:11:33.11:0,33,1751	0/0:7,0:7:4.16:0,4,979	0/0:3,0:3:9.03:0,9,513	1/1:1,0:1:3.01:146,3,0	1/1:2,0:2:2.61:10,3,0	0/0:13,0:13:36.06:0,36,2040	1/1:8,0:8:18.71:507,19,0	1/1:5,2:7:11.93:392,12,0	1/1:12,0:12:17.94:654,18,0
chr10	18432684	.	G	GA	365.30	PASS	AB=0.915;AC=15;AF=0.268;AN=56;BaseQRankSum=9.983;DP=365;FS=17.285;HRun=0;HaplotypeScore=93.3967;InbreedingCoeff=0.2553;MQ=61.30;MQ0=0;MQRankSum=-9.015;QD=3.41;ReadPosRankSum=2.958;VQSLOD=1.5916;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:27.01:0,27,332	0/1:8,0:8:5.82:6,0,25	0/0:16,0:16:38.81:0,39,511	0/0:11,0:11:25.32:0,25,327	0/1:10,1:11:6.96:28,0,7	0/0:18,0:18:44.99:0,45,545	0/0:10,0:10:27.09:0,27,378	0/0:19,0:19:54.18:0,54,755	0/0:15,0:15:45.15:0,45,629	0/1:9,0:9:28.86:29,0,45	0/1:7,1:8:5.24:33,0,5	0/0:10,0:10:30.06:0,30,397	1/1:5,0:5:7.97:34,8,0	1/1:5,0:5:5.47:26,5,0	0/0:11,0:11:33.11:0,33,461	0/0:12,0:12:30.06:0,30,397	0/1:8,5:13:68.85:69,0,71	0/0:25,0:25:72.22:0,72,987	0/0:30,0:29:81.25:0,81,1099	0/0:19,0:19:57.19:0,57,797	0/0:19,0:19:54.18:0,54,741	0/0:5,0:5:15.05:0,15,210	0/1:6,1:7:11.44:54,0,11	0/1:4,1:5:4.36:10,0,4	0/0:19,0:19:54.18:0,54,754	0/1:11,0:11:21.29:98,0,21	0/1:8,0:8:4.23:4,0,52	1/1:13,4:17:23.39:139,23,0
chr10	18432685	.	T	TTGTTGATGA	8659.08	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=7.215;DP=410;FS=13.854;HRun=0;HaplotypeScore=128.6027;InbreedingCoeff=0.9601;MQ=60.54;MQ0=0;MQRankSum=-9.784;QD=61.41;ReadPosRankSum=-1.472;VQSLOD=3.6003;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:23.49:0,23,603	1/1:1,7:9:14.88:562,15,0	0/0:16,0:16:19.14:0,19,515	0/0:11,0:11:18.17:0,18,464	1/1:0,10:18:18.06:789,18,0	0/0:18,0:18:36.11:0,36,963	0/0:10,0:10:27.06:0,27,615	0/0:24,0:24:54.12:0,54,1108	0/0:17,0:17:45.15:0,45,1307	1/1:1,8:12:26.73:1024,27,0	1/1:1,7:18:18.06:721,18,0	0/0:10,0:10:27.09:0,27,836	1/1:1,4:7:9.03:415,9,0	1/1:0,4:7:9.03:418,9,0	0/0:11,0:11:33.11:0,33,1022	0/0:13,0:13:30.09:0,30,818	1/1:5,3:13:33.05:1139,33,0	0/0:26,0:26:69.24:0,69,2031	0/0:31,0:30:76.42:0,76,1754	0/0:19,0:19:57.20:0,57,1723	0/0:19,0:19:57.16:0,57,1527	0/0:5,0:5:15.05:0,15,421	1/1:0,6:10:17.98:653,18,0	1/1:4,0:5:9.03:276,9,0	0/0:20,0:20:57.16:0,57,1629	1/1:0,11:13:36.08:1272,36,0	1/1:2,6:12:12.04:395,12,0	1/1:0,13:17:24.08:996,24,0
chr10	18432791	.	C	CA	6082.30	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=14.638;DP=416;FS=3.490;HRun=0;HaplotypeScore=72.5952;InbreedingCoeff=0.9964;MQ=87.37;MQ0=0;MQRankSum=-3.462;QD=38.99;ReadPosRankSum=3.410;VQSLOD=5.5354;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:60.19:0,60,819	1/1:0,6:6:18.06:257,18,0	0/0:9,0:9:27.09:0,27,375	0/0:21,0:21:56.46:0,56,725	1/1:0,11:11:33.11:475,33,0	0/0:20,0:20:57.14:0,57,759	0/0:12,0:12:30.10:0,30,420	0/0:31,0:31:87.28:0,87,1199	0/0:18,0:18:54.14:0,54,717	1/1:0,9:9:27.09:392,27,0	1/1:0,9:9:24.08:344,24,0	0/0:11,0:11:33.10:0,33,444	1/1:1,10:11:27.09:387,27,0	1/1:0,10:10:27.09:386,27,0	0/0:12,0:12:36.11:0,36,487	0/0:10,0:10:30.10:0,30,420	1/1:1,25:26:72.16:999,72,0	0/0:12,0:12:36.11:0,36,487	0/0:24,0:24:66.21:0,66,904	0/0:22,0:22:66.21:0,66,906	0/0:21,0:21:63.21:0,63,880	0/0:7,0:7:21.04:0,21,259	1/1:0,8:8:21.07:300,21,0	1/1:0,16:16:45.15:641,45,0	0/0:10,0:10:30.10:0,30,420	1/1:0,16:16:48.12:668,48,0	1/1:3,18:21:59.75:846,60,0	1/1:0,13:13:27.09:387,27,0
chr10	18433371	.	GACACAC	G	880.55	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-0.540;DP=632;FS=3.181;HRun=0;HaplotypeScore=185.8436;InbreedingCoeff=0.7036;MQ=58.00;MQ0=4;MQRankSum=-2.661;QD=8.47;ReadPosRankSum=-1.378;VQSLOD=2.7699;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:30:14.71:0,15,288	0/0:4,0:8:8.77:0,9,180	0/0:31,0:22:15.05:0,15,258	0/0:34,0:19:3.01:0,3,72	0/0:19,0:28:23.76:0,24,455	0/0:19,0:18:12.03:0,12,214	0/0:24,0:24:15.05:0,15,295	1/1:24,0:24:6.01:102,6,0	0/0:28,0:28:51.17:0,51,1442	0/0:11,0:20:36.12:0,36,928	0/0:14,0:23:14.98:0,15,290	0/0:21,0:21:11.84:0,12,276	0/0:12,0:24:20.98:0,21,433	0/0:13,0:24:17.50:0,18,437	0/0:17,0:17:9.03:0,9,205	0/0:21,0:19:12.04:0,12,307	0/0:14,0:30:30.08:0,30,634	0/0:13,0:11:18.02:0,18,393	1/1:13,7:20:17.94:313,18,0	1/1:8,13:21:33.10:545,33,0	1/1:30,9:39:3.01:62,3,0	0/0:17,0:15:6.01:0,6,104	0/0:12,0:19:8.32:0,8,168	0/0:19,0:33:24:0,24,490	0/0:13,0:11:3.01:0,3,66	0/0:14,0:25:63.04:0,63,1441	0/0:8,0:16:14.48:0,14,271	0/0:3,0:7:9.03:0,9,209
chr10	18433405	.	C	CACACACACACACACAT	4222.07	PASS	AB=1.000;AC=24;AF=0.429;AN=56;BaseQRankSum=-1.069;DP=581;FS=5.242;HRun=0;HaplotypeScore=243.8514;InbreedingCoeff=0.3538;MQ=67.77;MQ0=6;MQRankSum=-1.788;QD=14.36;ReadPosRankSum=1.494;VQSLOD=3.4717;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:22:99:244,0,169	0/1:10,0:10:21.53:22,0,106	0/0:43,0:26:67.79:0,68,587	0/0:27,0:14:35.53:0,36,281	0/1:17,0:17:7.13:7,0,153	1/1:0,10:16:6.02:480,6,0	1/1:20,0:20:56.97:746,57,0	0/0:29,0:29:79.96:0,80,599	0/0:31,0:31:89.52:0,90,1791	0/1:18,0:18:24.58:25,0,177	0/1:21,0:21:0.22:0,0,190	1/1:19,0:19:30.42:341,30,0	0/0:19,0:19:18.81:0,19,189	0/0:25,0:25:15.69:0,16,222	1/1:0,12:18:6.02:480,6,0	1/1:1,12:17:9.03:622,9,0	0/1:21,0:21:82.95:134,0,83	1/1:13,0:12:35.99:587,36,0	0/0:12,0:12:34.18:0,34,585	0/0:18,0:18:46.10:0,46,707	0/0:41,0:41:62.88:0,63,557	1/1:1,0:16:3.01:182,3,0	0/0:15,0:15:25.98:0,26,201	0/1:23,0:23:53.46:53,0,147	1/1:2,12:18:3.01:231,3,0	0/1:21,0:21:67.33:67,0,275	0/0:21,0:21:34.89:0,35,240	0/0:6,0:6:8.96:0,9,86
chr10	18435562	.	G	GAGTTGATCTCTGC	18317.77	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-6.633;DP=630;FS=8.190;HRun=0;HaplotypeScore=215.4201;InbreedingCoeff=0.9901;MQ=80.88;MQ0=0;MQRankSum=-11.816;QD=78.96;ReadPosRankSum=-1.333;VQSLOD=3.4045;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,105,3536	1/1:7,6:13:18.06:1069,18,0	0/0:22,0:22:45.15:0,45,1258	0/0:20,0:20:40.12:0,40,1151	1/1:10,13:24:41.49:1813,41,0	0/0:24,0:24:51.11:0,51,1767	0/0:31,0:31:75.22:0,75,2578	0/0:30,0:30:54.16:0,54,1651	0/0:17,0:17:45.12:0,45,1408	1/1:8,9:20:45.10:2035,45,0	1/1:15,9:27:32.98:1381,33,0	0/0:21,0:21:57.20:0,57,1840	1/1:13,6:21:27.09:1686,27,0	1/1:6,6:12:12.04:764,12,0	0/0:30,0:30:69.24:0,69,2301	0/0:16,0:16:33.11:0,33,1140	1/1:16,7:25:26.61:1501,27,0	0/0:17,0:17:42.14:0,42,1492	0/0:22,0:22:48.15:0,48,1484	0/0:35,0:35:87.30:0,87,2943	0/0:32,0:32:72.22:0,72,2483	0/0:27,0:27:66.20:0,66,2255	1/1:10,14:25:36.12:2222,36,0	1/1:4,8:14:21.03:1051,21,0	0/0:7,0:7:18.06:0,18,683	1/1:13,7:19:36.12:2285,36,0	1/1:13,5:20:27.09:1594,27,0	1/1:6,4:10:15.05:916,15,0
chr10	18435721	.	G	GAA	10361.56	PASS	AB=0.997;AC=41;AF=0.732;AN=56;BaseQRankSum=9.468;DP=604;FS=10.238;HRun=4;HaplotypeScore=221.8634;InbreedingCoeff=0.2233;MQ=66.27;MQ0=1;MQRankSum=-12.229;QD=19.89;ReadPosRankSum=3.980;VQSLOD=1.3926;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:21,0:21:41.50:62,0,41	1/1:5,6:11:24.08:396,24,0	0/0:35,0:32:66.96:0,67,773	0/0:29,0:24:58.97:0,59,740	1/1:16,21:36:88.61:1420,89,0	0/1:30,0:31:5.32:49,0,5	0/1:19,0:18:27.06:51,0,27	0/1:29,0:29:11.72:12,0,141	0/0:19,0:19:54.18:0,54,720	1/1:20,15:35:89.55:1363,90,0	1/1:8,18:27:72.80:1116,73,0	1/1:16,0:16:10.87:27,11,0	1/1:7,8:15:37.89:503,38,0	1/1:3,8:11:32.31:499,32,0	0/1:20,0:20:7.95:8,0,17	0/1:17,0:17:1.63:10,0,2	1/1:12,10:22:28.91:598,29,0	0/1:16,0:16:11.28:23,0,11	0/1:20,0:20:32.42:32,0,98	1/1:13,0:13:16.08:56,16,0	1/1:7,0:7:3.89:10,4,0	0/1:25,0:25:42.74:63,0,43	1/1:4,19:23:64.90:1056,65,0	1/1:7,10:17:36.03:519,36,0	1/1:27,0:27:5.31:32,5,0	1/1:9,10:19:47.90:660,48,0	1/1:8,20:27:68.26:1149,68,0	1/1:3,11:14:39.13:648,39,0
chr10	18435723	.	AAAC	A	2501.34	PASS	AB=0.936;AC=21;AF=0.375;AN=56;BaseQRankSum=4.427;DP=599;FS=4.075;HRun=0;HaplotypeScore=244.9887;InbreedingCoeff=0.6892;MQ=65.05;MQ0=1;MQRankSum=-6.295;QD=9.55;ReadPosRankSum=2.185;VQSLOD=2.9725;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:10.31:0,10,327	1/1:8,3:11:13.85:108,14,0	0/0:34,0:31:75.90:0,76,1281	0/0:30,0:25:69.81:0,70,1091	1/1:33,7:39:30.93:555,31,0	0/0:31,0:31:54.13:0,54,601	0/0:20,0:19:37.09:0,37,333	0/0:29,0:28:44.65:0,45,681	0/0:18,0:18:54.18:0,54,1100	0/1:28,6:34:40.02:528,0,40	1/1:24,3:27:17.24:296,17,0	0/0:14,0:14:29.99:0,30,364	1/1:13,1:14:7.88:95,8,0	1/1:10,1:11:13.02:112,13,0	0/0:19,0:19:32.33:0,32,356	0/0:16,0:16:30.35:0,30,343	0/1:21,1:22:37.75:141,0,38	0/0:14,0:14:3.53:0,4,219	0/0:19,0:19:10.83:0,11,484	0/0:14,0:13:29.82:0,30,365	0/0:6,0:6:12.04:0,12,151	0/0:25,0:25:2.71:0,3,431	1/1:23,0:23:25.06:184,25,0	1/1:16,2:18:16.91:279,17,0	0/0:27,0:27:54.08:0,54,640	0/1:20,0:20:13.36:13,0,75	1/1:26,2:27:22.09:238,22,0	1/1:11,3:14:20.59:157,21,0
chr10	18435726	.	C	CAAAAA	17310.72	PASS	AB=0.990;AC=45;AF=0.804;AN=56;BaseQRankSum=12.266;DP=620;FS=6.891;HRun=4;HaplotypeScore=225.6086;InbreedingCoeff=0.3904;MQ=63.59;MQ0=1;MQRankSum=-12.214;QD=32.18;ReadPosRankSum=5.392;VQSLOD=0.7642;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:26:2.31:376,2,0	1/1:5,4:9:23.84:390,24,0	0/0:33,0:30:44.31:0,44,759	0/0:30,0:26:22.34:0,22,733	1/1:22,18:39:99:1883,106,0	1/1:31,0:32:13.07:611,13,0	0/1:19,0:20:49.18:279,0,49	0/1:38,0:37:95.07:596,0,95	0/0:18,0:18:54.11:0,54,876	1/1:22,11:33:77.57:1483,78,0	1/1:14,15:30:79.14:1541,79,0	1/1:15,0:15:30.09:371,30,0	1/1:8,5:13:32.98:608,33,0	1/1:5,6:11:26.63:577,27,0	0/1:21,0:21:15.73:299,0,16	1/1:18,0:18:9.40:312,9,0	1/1:13,6:19:43.20:717,43,0	1/1:16,0:16:2.11:198,2,0	0/1:20,0:20:37.18:294,0,37	1/1:16,0:15:39.08:467,39,0	1/1:7,0:7:11.83:124,12,0	0/1:27,0:27:2.75:428,0,3	1/1:8,15:23:66.06:1385,66,0	1/1:12,5:17:38.58:582,39,0	1/1:27,0:27:44.30:628,44,0	1/1:10,9:19:54.13:1185,54,0	1/1:16,11:26:65.79:1238,66,0	1/1:6,8:14:38.88:738,39,0
chr10	18435731	.	C	CAAAAACA	31677.36	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=2.040;DP=657;FS=10.512;HRun=0;HaplotypeScore=194.7202;InbreedingCoeff=0.9096;MQ=60.65;MQ0=1;MQRankSum=-9.429;QD=54.71;ReadPosRankSum=4.076;VQSLOD=4.0883;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,20:26:42.06:1455,42,0	1/1:7,0:11:23.72:449,24,0	0/0:30,0:27:39:0,39,1073	0/0:31,0:26:43.85:0,44,1063	1/1:12,0:41:64.02:1896,64,0	1/1:3,26:33:54.19:2107,54,0	1/1:4,15:22:26.89:1019,27,0	1/1:6,32:43:43.35:2854,43,0	0/0:17,0:17:48.16:0,48,1120	1/1:12,0:32:57.32:1477,57,0	1/1:9,0:33:58.34:1656,58,0	1/1:0,13:15:30.10:1186,30,0	1/1:4,0:11:16.86:566,17,0	1/1:4,0:12:27.07:610,27,0	1/1:3,17:23:27.09:1068,27,0	1/1:1,17:21:27.09:1068,27,0	1/1:9,0:18:16.83:744,17,0	1/1:1,14:20:21.07:832,21,0	1/1:4,17:26:72.15:2025,72,0	1/1:1,16:19:42.14:1493,42,0	1/1:0,8:8:12.04:451,12,0	1/1:0,24:27:39.13:1492,39,0	1/1:6,0:25:60.10:1452,60,0	1/1:8,0:17:6.19:554,6,0	1/1:1,26:30:51.18:2016,51,0	1/1:2,0:20:57.18:1178,57,0	1/1:11,0:27:6.54:1298,7,0	1/1:7,0:15:15.94:731,16,0
chr10	18436165	.	G	GA	7431.22	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-7.925;DP=585;FS=8.341;HRun=7;HaplotypeScore=66.4708;InbreedingCoeff=0.9992;MQ=72.53;MQ0=0;MQRankSum=0.589;QD=30.71;ReadPosRankSum=3.173;VQSLOD=5.0972;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:84.07:0,84,797	1/1:0,10:10:30.09:362,30,0	0/0:20,0:20:39.58:0,40,405	0/0:14,0:14:24.97:0,25,277	1/1:1,21:22:51.16:616,51,0	0/0:24,0:24:66.08:0,66,630	0/0:10,0:10:27.03:0,27,254	0/0:29,0:29:63.02:0,63,593	0/0:12,0:12:33.04:0,33,313	1/1:6,18:24:54.17:652,54,0	1/1:3,20:23:60.13:691,60,0	0/0:12,0:12:27.04:0,27,261	1/1:1,15:16:45.14:541,45,0	1/1:1,17:18:45.14:544,45,0	0/0:21,0:21:57.08:0,57,545	0/0:20,0:20:54.08:0,54,521	1/1:1,12:13:36.11:435,36,0	0/0:19,0:19:48.05:0,48,456	0/0:22,0:22:57.08:0,57,550	0/0:31,0:31:84.13:0,84,810	0/0:13,0:13:36.06:0,36,347	0/0:35,0:35:96.08:0,96,910	1/1:1,26:28:78.24:936,78,0	1/1:6,24:30:69.21:833,69,0	0/0:24,0:24:63.06:0,63,593	1/1:2,25:27:78.24:941,78,0	1/1:5,17:21:48.13:567,48,0	1/1:0,9:9:27.05:311,27,0
chr10	18436273	.	ACT	A	407.55	PASS	AB=1.000;AC=38;AF=0.792;AN=48;BaseQRankSum=3.095;DP=599;FS=4.477;HRun=0;HaplotypeScore=123.5091;InbreedingCoeff=0.2461;MQ=65.83;MQ0=19;MQRankSum=-0.837;QD=1.08;ReadPosRankSum=1.499;VQSLOD=2.2622;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:0:0,0,0	1/1:7,0:7:2.84:14,3,0	./.	./.	0/1:24,0:24:0:0,0,0	1/1:23,0:21:2.88:15,3,0	1/1:12,0:11:5.87:35,6,0	0/0:24,0:24:5.92:0,6,39	1/1:8,6:14:9.02:96,9,0	1/1:22,0:22:2.80:13,3,0	./.	1/1:14,0:14:3.31:15,3,0	1/1:15,0:15:2.84:14,3,0	1/1:20,0:20:14.20:70,14,0	1/1:25,0:25:8.35:41,8,0	1/1:16,0:16:2.90:16,3,0	1/1:19,0:19:2.63:14,3,0	0/0:19,0:19:2.97:0,3,20	0/1:18,0:18:7.90:8,0,87	1/1:24,0:23:3:26,3,0	1/1:23,0:22:2.74:12,3,0	1/1:14,0:14:5.68:28,6,0	0/0:19,0:18:0:0,0,0	1/1:19,0:19:5.68:28,6,0	1/1:15,0:15:5.68:28,6,0	./.	1/1:22,0:22:2.78:14,3,0	1/1:33,0:32:5.68:28,6,0
chr10	18436309	.	TCTCTCTCTCTCTCC	T	3943.22	PASS	AB=1.000;AC=39;AF=0.696;AN=56;BaseQRankSum=4.278;DP=532;FS=1.272;HRun=0;HaplotypeScore=148.5818;InbreedingCoeff=0.1723;MQ=60.03;MQ0=25;MQRankSum=1.783;QD=9.13;ReadPosRankSum=1.608;VQSLOD=2.7585;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:26:43.76:478,44,0	1/1:5,0:5:3.01:102,3,0	0/0:26,0:13:24.41:0,24,273	0/0:27,0:8:12.28:0,12,115	1/1:33,0:32:19.15:191,19,0	1/1:24,0:20:2.99:23,3,0	1/1:15,0:14:5.99:50,6,0	0/1:25,0:24:99:241,0,346	0/0:11,0:11:23.62:0,24,634	1/1:23,0:22:27.36:397,27,0	1/1:13,0:12:2.70:14,3,0	0/1:18,0:18:15.93:109,0,16	0/1:11,0:11:12.54:96,0,13	1/1:14,0:14:18.05:534,18,0	1/1:22,0:21:7.63:115,8,0	1/1:18,0:18:2.61:26,3,0	1/1:21,0:20:1.80:100,2,0	0/1:17,0:16:57.11:57,0,268	0/1:14,0:14:89.34:89,0,1069	0/0:15,0:14:3.01:0,3,129	0/0:20,0:19:3.48:0,3,92	1/1:16,0:16:6.02:136,6,0	0/1:19,0:18:13.38:19,0,13	1/1:23,0:20:6.02:224,6,0	1/1:1,12:13:6.02:254,6,0	1/1:19,0:18:44.78:350,45,0	1/1:19,0:18:6.38:143,6,0	0/1:24,0:23:10.40:195,0,10
chr10	18436310	.	CTCTCTCTCTCTCCCTT	C	4098.40	PASS	AB=0.823;AC=26;AF=0.464;AN=56;BaseQRankSum=6.922;DP=530;FS=6.558;HRun=0;HaplotypeScore=157.8858;InbreedingCoeff=0.3137;MQ=60.34;MQ0=24;MQRankSum=0.915;QD=12.97;ReadPosRankSum=3.804;VQSLOD=2.0633;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:26:88.08:88,0,183	1/1:0,5:5:3.01:143,3,0	0/0:27,0:13:4.35:0,4,514	0/0:25,0:9:21.84:0,22,294	1/1:5,28:32:19.69:340,20,0	0/0:24,0:20:5.19:0,5,27	0/0:15,0:14:5.22:0,5,23	0/0:24,0:23:29.29:0,29,584	0/0:12,0:12:27.09:0,27,834	1/1:2,20:22:41.17:814,41,0	1/1:4,9:12:2.80:25,3,0	0/1:18,0:18:16.16:33,0,16	0/1:1,10:11:5.81:137,0,6	1/1:1,13:14:18.06:765,18,0	0/1:22,0:21:13.55:21,0,14	0/0:18,0:18:3.15:0,3,11	0/1:3,18:20:0.06:138,0,0	0/1:17,0:16:20.52:21,0,374	0/0:14,0:14:23.62:0,24,1308	0/0:16,0:15:32.76:0,33,373	0/0:19,0:18:3.48:0,3,131	0/1:16,0:16:24.85:25,0,164	0/0:8,11:18:8.78:0,9,54	1/1:23,0:20:6.02:168,6,0	1/1:13,0:13:6.02:146,6,0	1/1:2,17:18:48.10:752,48,0	1/1:2,17:18:6.28:204,6,0	0/1:2,22:23:2.08:278,0,2
chr10	18436311	.	TCTCTCTCTCTCC	T	3912.75	PASS	AB=1.000;AC=42;AF=0.750;AN=56;BaseQRankSum=3.020;DP=517;FS=7.908;HRun=0;HaplotypeScore=135.4372;InbreedingCoeff=0.3045;MQ=60.86;MQ0=24;MQRankSum=-0.025;QD=9.41;ReadPosRankSum=2.934;VQSLOD=1.9767;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:23:38.73:352,39,0	1/1:5,0:5:3.01:85,3,0	0/0:27,0:13:21.40:0,21,241	0/0:27,0:10:11.98:0,12,133	1/1:31,0:30:14.96:142,15,0	1/1:24,0:20:3.01:54,3,0	1/1:15,0:14:6.02:102,6,0	0/1:23,0:22:99:315,0,169	0/0:12,0:12:26.86:0,27,560	0/1:22,0:21:7.01:314,0,7	1/1:12,0:11:2.80:40,3,0	1/1:2,16:18:6.02:207,6,0	1/1:11,0:11:3.01:85,3,0	1/1:13,0:13:18.05:447,18,0	1/1:20,1:20:7.64:213,8,0	1/1:18,0:18:2.79:53,3,0	1/1:20,0:19:6:107,6,0	0/1:16,0:15:62.31:113,0,62	0/1:15,0:15:99:113,0,830	0/0:17,0:16:3.01:0,3,103	0/0:18,0:17:3.48:0,3,66	1/1:1,14:15:6.02:226,6,0	1/1:18,0:17:9.12:57,9,0	1/1:23,0:20:6.02:176,6,0	1/1:12,0:12:6.02:188,6,0	1/1:18,0:17:16.35:246,16,0	1/1:19,0:18:6.01:110,6,0	1/1:24,0:23:6.02:169,6,0
chr10	18436312	.	CTCTCTCTCTCCCTT	C	3793.48	PASS	AB=1.000;AC=37;AF=0.661;AN=56;BaseQRankSum=6.980;DP=509;FS=2.801;HRun=0;HaplotypeScore=142.1871;InbreedingCoeff=0.4968;MQ=61.40;MQ0=24;MQRankSum=-1.148;QD=10.66;ReadPosRankSum=4.850;VQSLOD=2.5319;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:23:82.87:96,0,83	1/1:5,0:5:3.01:110,3,0	0/0:26,0:13:4.35:0,4,550	0/0:25,0:10:18.89:0,19,314	1/1:29,0:29:14.97:218,15,0	0/1:22,0:18:13.98:23,0,14	1/1:15,0:14:5.60:27,6,0	0/0:23,0:22:22.18:0,22,323	0/0:13,0:13:20.13:0,20,717	1/1:21,0:20:24.15:677,24,0	1/1:12,0:11:2.64:21,3,0	1/1:17,0:17:6.02:99,6,0	1/1:11,0:11:3.01:110,3,0	1/1:13,0:13:18.06:600,18,0	1/1:21,0:20:7.32:83,7,0	1/1:18,0:18:2.80:14,3,0	1/1:20,0:19:6:134,6,0	0/0:15,0:14:17.52:0,18,257	0/0:15,0:15:23.55:0,24,1075	0/0:18,0:17:38.58:0,39,382	0/0:18,0:17:3.48:0,3,105	0/1:15,0:15:81.62:82,0,163	1/1:17,0:16:9.13:97,9,0	1/1:2,21:21:6.02:258,6,0	1/1:12,0:12:6.02:214,6,0	1/1:18,0:17:33.39:551,33,0	1/1:19,0:18:6.28:157,6,0	1/1:24,0:23:6.02:220,6,0
chr10	18436313	.	TCTCTCTCTCC	T	4050.01	PASS	AB=1.000;AC=43;AF=0.768;AN=56;BaseQRankSum=2.808;DP=500;FS=9.526;HRun=0;HaplotypeScore=119.8947;InbreedingCoeff=0.3913;MQ=62.04;MQ0=24;MQRankSum=0.265;QD=10.07;ReadPosRankSum=3.341;VQSLOD=1.7937;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:20:35.32:317,35,0	1/1:5,0:5:3.01:71,3,0	0/0:27,0:14:20.58:0,21,268	0/0:23,0:8:11.98:0,12,133	1/1:30,0:29:14.85:118,15,0	1/1:4,17:18:3.01:92,3,0	1/1:1,14:14:6.02:192,6,0	0/1:23,0:22:84.55:358,0,85	0/0:13,0:13:29.99:0,30,493	1/1:20,0:19:35.95:344,36,0	1/1:12,0:11:2.89:19,3,0	1/1:17,0:17:6.02:142,6,0	1/1:10,0:10:3.01:71,3,0	1/1:13,0:13:18.05:378,18,0	1/1:4,17:20:8.05:270,8,0	1/1:0,18:18:2.79:97,3,0	1/1:20,0:19:6:94,6,0	1/1:15,0:14:9.97:303,10,0	0/1:15,0:15:99:113,0,574	0/0:18,0:17:3.01:0,3,77	0/0:17,0:16:3.48:0,3,39	1/1:14,0:14:6.02:160,6,0	0/1:17,0:16:0.78:15,0,1	1/1:23,0:20:6.02:141,6,0	1/1:12,0:12:6.02:160,6,0	1/1:18,0:17:38.96:343,39,0	1/1:19,0:18:6.02:111,6,0	1/1:23,0:22:6.02:141,6,0
chr10	18436319	.	TCTCC	T	2802.98	PASS	AB=1.000;AC=48;AF=0.857;AN=56;BaseQRankSum=1.351;DP=500;FS=27.054;HRun=0;HaplotypeScore=99.9900;InbreedingCoeff=0.4381;MQ=67.48;MQ0=21;MQRankSum=-2.761;QD=6.44;ReadPosRankSum=4.248;VQSLOD=0.4988;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:20:37.43:288,37,0	1/1:5,0:5:3:29,3,0	0/0:31,0:19:32.64:0,33,372	0/0:22,0:11:17.10:0,17,194	1/1:30,0:29:9.69:54,10,0	1/1:22,0:18:3.01:36,3,0	1/1:15,0:14:6.02:78,6,0	1/1:25,0:24:45.02:527,45,0	0/0:12,0:12:26.94:0,27,221	1/1:20,0:19:35.95:303,36,0	0/1:12,0:11:0:0,0,0	1/1:17,0:17:5.99:61,6,0	1/1:10,0:10:3:29,3,0	1/1:13,0:13:18.02:169,18,0	1/1:19,0:18:8.98:111,9,0	1/1:18,0:18:3.01:40,3,0	1/1:20,0:19:5.99:52,6,0	1/1:12,0:12:29.83:230,30,0	0/1:18,0:18:49.43:282,0,49	1/1:18,0:17:6.47:52,6,0	1/1:2,17:18:2.84:58,3,0	1/1:14,0:14:6.02:76,6,0	1/1:13,0:12:1.24:3,1,0	1/1:23,0:20:6.01:58,6,0	1/1:12,0:12:6.02:77,6,0	1/1:18,0:17:29.95:249,30,0	1/1:19,0:18:3.89:31,4,0	1/1:23,0:22:6.01:58,6,0
chr10	18436501	.	C	CATCATAGCTAATA	36587.91	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-2.676;DP=566;FS=6.825;HRun=0;HaplotypeScore=194.1787;InbreedingCoeff=0.9957;MQ=86.24;MQ0=0;MQRankSum=-18.024;QD=136.01;ReadPosRankSum=-0.138;VQSLOD=4.6838;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,17:27:63.21:3565,63,0	0/0:11,0:11:33.11:0,33,1249	0/0:20,0:20:57.09:0,57,1720	0/0:28,0:28:76.10:0,76,2401	0/0:23,0:23:66.18:0,66,2270	1/1:10,11:22:57.19:3130,57,0	1/1:16,10:31:66.23:3657,66,0	1/1:24,6:31:90.30:4954,90,0	0/0:20,0:20:51.17:0,51,1980	0/0:25,0:25:72.24:0,72,2804	0/0:22,0:22:66.21:0,66,2503	1/1:7,11:20:60.17:3571,60,0	0/0:18,0:18:51.13:0,51,1644	0/0:22,0:22:63.19:0,63,2284	1/1:6,10:20:42.61:2454,43,0	1/1:4,9:15:36.12:2073,36,0	0/0:19,0:19:54.19:0,54,2070	1/1:3,2:7:12.04:801,12,0	1/1:8,4:12:36.12:1780,36,0	1/1:11,8:24:54.10:2604,54,0	1/1:12,7:20:51.17:2803,51,0	1/1:14,5:21:51.17:2223,51,0	0/0:15,0:15:45.11:0,45,1489	0/0:25,0:25:69.22:0,69,2422	1/1:9,9:19:54.18:2974,54,0	0/0:23,0:23:69.23:0,69,2618	0/0:15,0:14:42.14:0,42,1689	0/0:11,0:11:33.11:0,33,1323
chr10	18436941	.	A	AG	13661.25	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-13.448;DP=638;FS=6.506;HRun=1;HaplotypeScore=102.6315;InbreedingCoeff=1.0000;MQ=82.59;MQ0=0;MQRankSum=-4.594;QD=44.94;ReadPosRankSum=1.013;VQSLOD=3.9354;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,42:42:99:2014,126,0	0/0:15,0:15:45.15:0,45,628	0/0:27,0:28:64.76:0,65,1021	0/0:19,0:19:54.18:0,54,743	0/0:27,0:27:72.24:0,72,1007	1/1:1,25:26:69.24:1103,69,0	1/1:0,28:28:78.27:1247,78,0	1/1:0,24:24:66.23:1055,66,0	0/0:22,0:22:66.22:0,66,923	0/0:31,0:31:93.31:0,93,1301	0/0:21,0:21:60.20:0,60,839	1/1:0,17:17:45.15:718,45,0	0/0:13,0:13:39.11:0,39,526	0/0:21,0:21:63.21:0,63,881	1/1:0,17:17:51.17:815,51,0	1/1:0,18:18:48.16:767,48,0	0/0:21,0:21:63.21:0,63,881	1/1:2,18:20:51.17:815,51,0	1/1:1,22:23:66.18:1002,66,0	1/1:0,23:23:69.24:1102,69,0	1/1:1,25:26:69.24:1103,69,0	1/1:0,22:22:66.23:1055,66,0	0/0:18,0:18:54.16:0,54,736	0/0:22,0:22:63.20:0,63,862	1/1:0,18:18:54.18:863,54,0	0/0:29,0:29:87.25:0,87,1195	0/0:30,0:30:90.30:0,90,1255	0/0:17,0:17:48.16:0,48,665
chr10	18437126	.	TATCTAAACATTTTAAAAAAA	T	20420.08	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=0.502;DP=512;FS=1.767;HRun=0;HaplotypeScore=345.3468;InbreedingCoeff=0.9772;MQ=76.40;MQ0=0;MQRankSum=-13.740;QD=105.26;ReadPosRankSum=6.651;VQSLOD=3.6457;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:69.22:0,69,4605	1/1:1,5:6:15.05:838,15,0	0/0:20,0:20:51.18:0,51,2880	0/0:12,0:11:24.08:0,24,1494	1/1:9,20:29:54.19:3018,54,0	0/0:24,0:24:63.22:0,63,3933	0/0:10,0:10:21.07:0,21,1042	0/0:27,0:27:72.24:0,72,4237	0/0:24,0:24:63.17:0,63,5450	1/1:6,15:21:45.15:2320,45,0	1/1:9,16:25:45.15:2502,45,0	0/0:16,0:16:45.15:0,45,2775	1/1:3,12:15:33.11:1844,33,0	1/1:4,7:11:21.07:1174,21,0	0/0:19,0:19:51.18:0,51,3318	0/0:12,0:12:33.11:0,33,2175	1/1:3,5:8:15.05:799,15,0	0/0:22,0:22:54.19:0,54,3595	0/0:22,0:22:66.22:0,66,3625	0/0:24,0:24:69.24:0,69,4566	0/0:13,0:13:33.11:0,33,2102	0/0:21,0:21:63.22:0,63,3979	1/1:3,14:17:42.14:2308,42,0	1/1:4,6:10:6.02:335,6,0	0/0:28,0:28:66.23:0,66,4472	1/1:2,13:15:39.13:1946,39,0	1/1:6,18:24:45.15:2498,45,0	1/1:7,6:13:15.05:838,15,0
chr10	18437135	.	AT	A	7442.68	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=6.002;DP=426;FS=11.444;HRun=4;HaplotypeScore=188.9629;InbreedingCoeff=0.8994;MQ=73.78;MQ0=0;MQRankSum=-6.722;QD=20.85;ReadPosRankSum=3.817;VQSLOD=2.8617;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:11.78:0,12,119	1/1:5,0:5:11.10:35,11,0	0/0:16,0:15:28.28:0,28,408	0/0:9,0:8:23.99:0,24,294	1/1:20,0:20:39.96:126,40,0	1/1:0,21:21:57.17:681,57,0	1/1:0,7:7:12.04:144,12,0	1/1:2,18:22:59.27:653,59,0	0/0:21,0:21:63.21:0,63,881	1/1:15,0:15:28.86:91,29,0	1/1:16,0:16:27.46:92,27,0	1/1:0,13:13:36.11:430,36,0	1/1:12,0:12:24.42:77,24,0	1/1:7,0:7:15.54:49,16,0	1/1:1,19:20:51.16:608,51,0	1/1:0,11:11:30.09:358,30,0	1/1:5,0:5:8.88:28,9,0	1/1:0,24:24:54.10:627,54,0	1/1:0,21:21:63.03:701,63,0	1/1:4,20:24:57.84:728,58,0	1/1:1,9:10:27.08:323,27,0	1/1:1,20:21:57.02:645,57,0	1/1:14,0:14:12.50:72,12,0	1/1:6,0:6:4.44:14,4,0	1/1:0,26:26:63.19:753,63,0	1/1:13,0:13:24.42:77,24,0	1/1:18,0:18:30.42:96,30,0	1/1:6,0:6:11.10:35,11,0
chr10	18438074	.	AC	A	9490.15	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=18.937;DP=643;FS=2.944;HRun=3;HaplotypeScore=82.1018;InbreedingCoeff=0.9997;MQ=93.06;MQ0=0;MQRankSum=-3.317;QD=32.61;ReadPosRankSum=2.147;VQSLOD=5.2608;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,36:37:99:1302,105,0	0/0:13,0:13:39.13:0,39,559	0/0:29,0:29:87.26:0,87,1208	0/0:25,0:25:52.11:0,52,800	0/0:23,0:23:66.19:0,66,896	1/1:1,13:14:39.12:483,39,0	1/1:2,26:28:60.19:741,60,0	1/1:0,27:27:72.20:867,72,0	0/0:32,0:32:93.28:0,93,1298	0/0:21,0:21:60.19:0,60,845	0/0:17,0:17:51.16:0,51,716	1/1:0,20:20:51.16:632,51,0	0/0:17,0:17:51.17:0,51,734	0/0:22,0:22:66.22:0,66,945	1/1:0,22:22:63.20:781,63,0	1/1:0,20:20:51.16:632,51,0	0/0:31,0:31:90.30:0,90,1295	1/1:0,8:8:24.08:298,24,0	1/1:2,22:24:63.20:780,63,0	1/1:0,25:25:69.22:855,69,0	1/1:0,28:28:72.23:893,72,0	1/1:3,19:22:57.18:705,57,0	0/0:20,0:20:48.13:0,48,654	0/0:30,0:30:87.24:0,87,1208	1/1:1,15:16:42.13:521,42,0	0/0:27,0:27:75.23:0,75,1043	0/0:28,0:28:81.27:0,81,1160	0/0:17,0:17:48.16:0,48,691
chr10	18439585	.	G	GA	4087.30	PASS	AC=26;AF=0.481;AN=54;BaseQRankSum=0.106;DP=534;FS=11.570;HRun=7;HaplotypeScore=114.5150;InbreedingCoeff=0.9427;MQ=49.04;MQ0=9;MQRankSum=-6.513;QD=16.82;ReadPosRankSum=-5.385;VQSLOD=1.2331;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:21,24:44:78.03:866,78,0	0/0:8,0:8:17.84:0,18,146	0/0:11,1:2:3:0,3,29	./.	0/0:28,0:27:44.67:0,45,418	1/1:7,11:18:27.88:295,28,0	1/1:6,7:13:12.92:140,13,0	1/1:13,10:22:42.07:482,42,0	0/0:15,0:15:14.85:0,15,142	0/0:16,0:16:33.04:0,33,316	0/0:17,0:17:39.06:0,39,376	1/1:9,7:15:24.78:218,25,0	0/0:12,0:12:11.90:0,12,114	0/0:23,0:23:29.88:0,30,286	1/1:9,6:13:28.55:297,29,0	1/1:7,10:17:43.25:455,43,0	0/0:23,0:22:29.33:0,29,277	1/1:8,8:15:18:200,18,0	1/1:10,5:14:18.05:207,18,0	1/1:14,15:26:48.51:509,49,0	1/1:6,3:8:6.02:72,6,0	1/1:12,5:17:19.24:165,19,0	0/0:21,0:20:47.92:0,48,462	0/0:26,0:26:41.79:0,42,399	1/1:4,6:9:15.05:181,15,0	0/0:28,0:27:42.03:0,42,405	0/0:30,0:30:47.64:0,48,452	0/0:21,0:20:47.03:0,47,436
chr10	18441611	.	T	TC	574.42	PASS	AB=1.000;AC=9;AF=0.173;AN=52;BaseQRankSum=-4.421;DP=135;FS=10.380;HRun=7;HaplotypeScore=18.2002;InbreedingCoeff=0.6220;MQ=86.20;MQ0=0;MQRankSum=-0.201;QD=20.52;ReadPosRankSum=-1.752;VQSLOD=1.1836;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,9:9:21.06:254,21,0	0/0:4,0:4:6:0,6,53	0/0:6,0:6:11.61:0,12,97	0/0:8,0:9:13.10:0,13,111	0/0:4,0:4:12.02:0,12,116	0/0:1,0:1:3:0,3,29	0/0:7,0:7:20.93:0,21,189	1/1:3,1:4:6.01:63,6,0	0/0:4,0:4:8.69:0,9,87	0/0:6,0:6:12.02:0,12,116	0/0:3,0:3:9.01:0,9,87	0/0:5,0:5:9.01:0,9,87	0/0:7,0:7:12:0,12,115	0/1:2,0:2:2.29:2,0,24	0/0:6,0:6:15.02:0,15,145	0/0:1,0:1:3:0,3,29	0/0:5,0:5:12.01:0,12,116	0/0:4,0:4:8.99:0,9,81	1/1:0,3:3:9.03:109,9,0	./.	1/1:1,9:10:24.07:290,24,0	0/0:5,0:5:15.02:0,15,145	0/0:7,0:7:15.01:0,15,139	0/0:8,0:8:21.03:0,21,202	0/0:8,0:8:24.03:0,24,227	0/0:4,0:4:9.01:0,9,87	0/0:1,0:1:3:0,3,29	./.
chr10	18442118	.	T	TACACACACACACACACACAC	23296.15	PASS	AB=0.986;AC=44;AF=0.786;AN=56;BaseQRankSum=-2.820;DP=649;FS=5.304;HRun=0;HaplotypeScore=338.5637;InbreedingCoeff=0.3420;MQ=56.01;MQ0=2;MQRankSum=-5.844;QD=42.51;ReadPosRankSum=4.149;VQSLOD=2.4764;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:17,0:17:2.96:39,0,3	1/1:13,5:17:18.04:1464,18,0	0/0:36,0:22:40.23:0,40,666	0/0:31,0:22:29.97:0,30,752	1/1:10,14:23:6.02:500,6,0	0/1:19,0:19:32.79:267,0,33	1/1:31,0:29:27.09:1142,27,0	1/1:23,0:23:30.08:598,30,0	0/0:31,0:31:81.26:0,81,3597	1/1:33,2:33:63.19:2798,63,0	1/1:15,7:22:9.03:646,9,0	1/1:16,0:16:8.13:436,8,0	1/1:9,0:8:12.04:367,12,0	1/1:13,0:17:12.04:642,12,0	0/1:31,0:31:11.18:1344,0,11	1/1:20,0:19:17.37:1190,17,0	0/1:10,1:10:6.59:637,0,7	0/1:9,0:9:14.20:746,0,14	1/1:16,0:16:18.06:286,18,0	1/1:29,0:29:9.95:155,10,0	0/1:14,0:12:25.88:250,0,26	1/1:37,0:37:23.08:1262,23,0	1/1:28,1:29:17.95:749,18,0	1/1:22,3:24:23.23:1112,23,0	1/1:25,0:24:18.53:883,19,0	1/1:34,0:33:75.25:3587,75,0	1/1:28,1:29:24.08:1761,24,0	1/1:6,0:6:6.02:435,6,0
chr10	18442133	.	A	AACACACACACACACACACACATG	22181.09	PASS	AB=0.873;AC=25;AF=0.446;AN=56;BaseQRankSum=7.759;DP=625;FS=0.000;HRun=0;HaplotypeScore=397.1352;InbreedingCoeff=-0.6779;MQ=43.55;MQ0=6;MQRankSum=-7.750;QD=45.36;ReadPosRankSum=8.071;VQSLOD=1.6427;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:18,0:22:27.81:28,0,252	0/1:14,0:13:60.39:983,0,60	0/0:33,0:16:48.16:0,48,1277	0/0:43,0:19:51.33:0,51,1389	0/1:15,0:15:78.73:325,0,79	0/1:4,1:24:99:276,0,151	0/1:23,0:30:99:1223,0,155	0/1:14,0:25:27.12:829,0,27	0/0:33,0:33:99:0,99,4837	0/1:33,0:31:99:2373,0,199	0/1:18,0:17:99:382,0,102	0/1:8,0:11:38.35:690,0,38	0/1:10,0:9:72.71:399,0,73	0/1:14,0:13:57.77:461,0,58	0/1:19,0:27:68.76:1365,0,69	0/1:15,0:20:78.24:2110,0,78	0/1:13,0:12:99:554,0,125	0/1:6,0:10:77.78:1078,0,78	1/1:9,0:11:20.36:561,20,0	0/0:23,0:27:1.06:0,1,168	0/1:9,0:13:99:227,0,120	0/1:22,0:34:76.37:1476,0,76	0/1:33,0:33:99:549,0,244	0/1:28,0:27:99:604,0,105	0/1:14,0:23:8.19:1417,0,8	0/1:33,0:32:89.19:2692,0,89	0/1:18,0:18:99:1317,0,158	0/1:4,0:4:46.05:264,0,46
chr10	18442139	.	ATG	A	1932.14	PASS	AB=0.970;AC=34;AF=0.607;AN=56;BaseQRankSum=0.164;DP=601;FS=46.113;HRun=0;HaplotypeScore=206.9788;InbreedingCoeff=-0.1595;MQ=40.95;MQ0=7;MQRankSum=-3.039;QD=4.03;ReadPosRankSum=-3.753;VQSLOD=1.0939;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:21,0:21:25.68:50,0,26	0/1:13,0:12:18.74:19,0,110	0/0:30,0:17:35.78:0,36,571	0/0:41,0:17:47.18:0,47,691	0/0:19,0:19:12:0,12,208	1/1:14,0:14:5.67:30,6,0	1/1:29,0:27:11.32:124,11,0	0/1:26,0:25:99:159,0,719	0/0:31,0:31:93.31:0,93,1808	0/1:32,0:30:99:186,0,808	0/1:17,0:16:15.83:16,0,55	1/1:10,0:10:4.30:27,4,0	0/1:11,0:10:58.63:59,0,83	1/1:13,0:12:5.96:68,6,0	1/1:27,0:27:18.45:179,18,0	1/1:19,0:18:5.11:98,5,0	0/1:13,1:13:47.81:48,0,194	0/1:10,0:10:96.11:96,0,183	0/1:9,1:10:97.72:98,0,128	1/1:25,0:25:11.43:157,11,0	1/1:13,0:12:3.82:26,4,0	1/1:35,0:35:9.85:70,10,0	0/1:34,2:36:52.13:52,0,369	0/1:25,4:28:99:196,0,131	0/1:24,0:23:24.84:50,0,25	0/1:33,1:33:99:222,0,862	0/1:14,1:15:66.01:66,0,177	1/1:2,1:3:0.24:7,0,0
chr10	18442161	.	ACAGAGACC	A	1203.85	PASS	AB=0.954;AC=21;AF=0.375;AN=56;BaseQRankSum=6.740;DP=482;FS=30.939;HRun=0;HaplotypeScore=193.7449;InbreedingCoeff=0.1734;MQ=51.85;MQ0=16;MQRankSum=-4.748;QD=4.74;ReadPosRankSum=-5.721;VQSLOD=-0.6047;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:14,2:16:14.77:257,0,15	0/0:10,0:10:17.95:0,18,339	0/0:39,0:11:25.46:0,25,358	0/1:67,0:18:55.06:55,0,191	0/0:18,0:18:14.85:0,15,487	0/1:14,0:14:16.79:116,0,17	0/1:11,0:9:14.61:131,0,15	0/1:19,0:19:41.12:41,0,399	0/0:29,0:29:84.19:0,84,2352	0/0:22,0:21:32.68:0,33,1314	0/0:19,0:18:11.41:0,11,424	0/1:5,1:6:0:0,0,0	0/0:7,0:6:12.01:0,12,280	0/0:13,0:12:20.55:0,21,393	1/1:8,3:11:12.42:114,12,0	1/1:9,2:10:11.55:100,12,0	0/1:12,0:11:18.97:19,0,370	0/1:5,1:6:14.50:125,0,15	0/0:7,0:5:15:0,15,179	0/1:9,1:10:4.66:80,0,5	1/1:9,0:9:8.89:91,9,0	1/1:16,4:20:11.57:111,12,0	0/0:30,0:30:15.89:0,16,960	0/1:21,0:21:24.58:25,0,359	1/1:13,2:14:2.63:64,3,0	0/0:22,0:22:34.84:0,35,1407	0/0:12,0:12:27.61:0,28,620	0/1:5,0:5:51.11:51,0,155
chr10	18442191	.	AGAGG	A	1606.29	PASS	AB=0.872;AC=24;AF=0.429;AN=56;BaseQRankSum=1.395;DP=531;FS=3.644;HRun=0;HaplotypeScore=160.3633;InbreedingCoeff=-0.3322;MQ=49.79;MQ0=26;MQRankSum=-1.795;QD=3.94;ReadPosRankSum=-3.666;VQSLOD=1.6730;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:26:9.87:10,0,48	0/1:6,1:7:13.23:13,0,143	0/1:43,0:9:2.06:2,0,12	0/1:94,0:22:16.58:17,0,254	0/1:16,2:18:60.92:61,0,234	0/1:10,0:9:17.40:17,0,17	0/1:14,0:14:88.15:99,0,88	0/0:15,0:10:12.97:0,13,421	0/0:28,0:28:81.18:0,81,1856	0/1:12,9:20:99:354,0,448	0/1:9,3:12:47.90:48,0,93	1/1:7,0:7:2.13:5,2,0	0/0:3,4:7:9.03:0,9,159	0/0:10,1:10:14.25:0,14,129	1/1:21,0:21:0.93:6,1,0	0/1:10,0:10:0.57:1,0,1	0/1:6,13:19:99:149,0,150	0/1:7,0:6:9.25:16,0,9	0/1:9,0:7:88.71:89,0,143	0/0:13,0:13:0.19:0,0,29	0/1:6,0:6:18.94:19,0,29	1/1:13,0:13:2.69:28,3,0	0/0:17,7:24:23.42:0,23,342	0/0:11,14:25:11.82:0,12,222	0/1:11,0:11:2.43:21,0,2	0/1:13,12:25:99:476,0,491	0/1:7,11:18:99:163,0,174	0/1:2,10:12:39.58:162,0,40
chr10	18442204	.	CAG	C	589.36	PASS	AB=0.916;AC=14;AF=0.250;AN=56;BaseQRankSum=3.092;DP=530;FS=1.469;HRun=0;HaplotypeScore=134.1160;InbreedingCoeff=-0.1675;MQ=46.59;MQ0=23;MQRankSum=1.109;QD=2.79;ReadPosRankSum=-0.244;VQSLOD=2.6821;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:26:13.85:14,0,202	0/1:6,1:7:66.65:67,0,83	0/0:37,0:9:11.47:0,11,246	0/0:89,0:19:18.52:0,19,171	0/1:16,0:16:24.13:24,0,137	0/0:13,0:12:30.36:0,30,428	0/0:16,0:15:14.83:0,15,409	0/0:17,0:12:18.05:0,18,260	0/0:26,0:26:69.21:0,69,1117	0/1:16,1:17:64.92:65,0,335	0/1:8,1:9:16.69:17,0,74	0/1:7,1:8:5.35:5,0,143	0/1:9,2:11:67.55:68,0,167	0/0:9,2:10:12.04:0,12,192	0/0:25,0:25:48.07:0,48,556	0/0:13,0:13:22.43:0,22,299	0/1:21,0:21:56.94:57,0,120	0/0:9,0:8:15.02:0,15,187	0/0:11,0:8:17.27:0,17,166	0/0:14,0:14:3.53:0,4,254	0/0:11,1:12:21.53:0,22,304	0/0:15,0:15:24.89:0,25,306	0/1:12,6:18:32.17:108,0,32	1/1:20,4:24:9.95:101,10,0	0/0:9,0:9:18.50:0,19,219	0/1:18,3:21:99:139,0,279	0/1:19,2:21:62.32:62,0,209	0/1:11,0:11:19.66:20,0,149
chr10	18443224	.	GA	G	7518.72	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=14.817;DP=599;FS=3.666;HRun=4;HaplotypeScore=62.9298;InbreedingCoeff=0.9992;MQ=83.17;MQ0=0;MQRankSum=-2.851;QD=31.20;ReadPosRankSum=4.982;VQSLOD=5.2343;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:38:99:0,111,1513	1/1:1,10:11:24.07:288,24,0	0/0:23,0:23:68.26:0,68,916	0/0:16,0:16:42.14:0,42,584	1/1:1,19:20:54.16:647,54,0	0/0:16,0:16:48.15:0,48,656	0/0:17,0:17:51.15:0,51,695	0/0:31,0:31:88.52:0,89,1257	0/0:19,0:19:51.16:0,51,698	1/1:3,26:29:75.23:898,75,0	1/1:0,12:12:33.10:396,33,0	0/0:19,0:19:54.17:0,54,741	1/1:0,27:27:78.24:935,78,0	1/1:0,21:21:57.17:684,57,0	0/0:32,0:32:89.33:0,89,1243	0/0:25,0:25:60.20:0,60,839	1/1:1,16:17:45.14:540,45,0	0/0:17,0:17:48.13:0,48,651	0/0:25,0:25:72.21:0,72,949	0/0:20,0:20:57.17:0,57,764	0/0:26,0:26:72.23:0,72,991	0/0:24,0:24:66.20:0,66,892	1/1:0,16:16:36.06:432,36,0	1/1:1,20:21:57.17:684,57,0	0/0:9,0:9:24.08:0,24,335	1/1:0,20:20:60.18:720,60,0	1/1:2,31:33:81.25:972,81,0	1/1:0,14:14:27.08:324,27,0
chr10	18443457	.	TAC	T	2876.81	PASS	AB=0.887;AC=43;AF=0.768;AN=56;BaseQRankSum=0.510;DP=604;FS=8.461;HRun=0;HaplotypeScore=156.1651;InbreedingCoeff=0.3343;MQ=52.74;MQ0=12;MQRankSum=3.485;QD=5.84;ReadPosRankSum=4.261;VQSLOD=2.2902;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:44,0:44:5.63:53,0,6	1/1:8,0:8:11.30:59,11,0	0/0:45,0:18:10.27:0,10,114	0/0:39,0:17:20.26:0,20,214	1/1:18,1:19:23.23:174,23,0	1/1:19,1:19:9.41:137,9,0	1/1:23,1:24:13.57:125,14,0	0/1:6,0:16:21.18:33,0,21	0/0:27,0:27:55.40:0,55,785	1/1:15,1:16:2.82:138,3,0	1/1:15,2:17:17.15:100,17,0	1/1:27,1:28:12.87:196,13,0	0/1:14,0:14:1:44,0,1	1/1:19,0:19:21.08:217,21,0	1/1:12,1:13:6.75:106,7,0	1/1:19,0:19:2.82:40,3,0	1/1:25,1:25:23.73:197,24,0	1/1:16,0:16:15.78:125,16,0	0/1:6,0:9:3.97:4,0,52	0/1:13,0:13:0.33:6,0,0	1/1:24,0:23:2.27:11,2,0	0/1:17,2:19:0.15:95,0,0	1/1:14,2:15:20.56:160,21,0	1/1:40,1:41:59.44:416,59,0	1/1:24,1:25:6.85:67,7,0	0/1:19,0:19:14.23:239,0,14	1/1:18,0:18:19.13:166,19,0	1/1:6,2:8:16.10:122,16,0
chr10	18443475	.	C	CAT	604.31	PASS	AB=0.971;AC=10;AF=0.179;AN=56;BaseQRankSum=-0.343;DP=624;FS=0.000;HRun=0;HaplotypeScore=179.9378;InbreedingCoeff=0.4349;MQ=44.56;MQ0=14;MQRankSum=-1.659;QD=4.08;ReadPosRankSum=-4.561;VQSLOD=0.9900;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:44,0:44:34.60:289,35,0	0/0:8,0:8:11.34:0,11,95	0/0:32,0:7:10.25:0,10,101	0/0:28,0:7:21.04:0,21,264	0/0:24,0:24:23.32:0,23,155	0/0:24,0:23:11.28:0,11,140	0/0:34,0:33:14.34:0,14,126	0/1:21,1:21:31.78:231,0,32	0/0:26,0:26:71.95:0,72,946	0/0:20,0:19:32.23:0,32,309	0/0:17,0:17:17.73:0,18,123	0/0:24,0:25:24.59:0,25,154	0/1:11,0:11:4.35:4,0,25	0/0:17,0:17:20.83:0,21,163	0/1:12,0:11:0.90:1,0,121	0/0:20,0:20:8.04:0,8,68	0/0:27,0:26:36.07:0,36,207	0/0:18,0:18:15.32:0,15,129	0/1:12,1:11:28.90:131,0,29	1/1:11,6:17:11.12:46,11,0	1/1:29,0:26:5.71:46,6,0	0/0:24,0:23:2.37:0,2,65	0/0:14,0:13:20.57:0,21,158	0/0:41,0:41:67.74:0,68,497	0/0:26,0:26:4.39:0,4,71	0/0:21,0:21:46.07:0,46,386	0/0:18,0:18:20.55:0,21,103	0/0:11,0:11:19.91:0,20,165
chr10	18443494	.	A	ACG	3808.52	PASS	AB=1.000;AC=38;AF=0.679;AN=56;BaseQRankSum=6.437;DP=626;FS=3.291;HRun=0;HaplotypeScore=184.7662;InbreedingCoeff=0.3451;MQ=44.10;MQ0=9;MQRankSum=-1.228;QD=7.66;ReadPosRankSum=3.754;VQSLOD=3.2332;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:37,0:37:1.64:6,2,0	1/1:10,0:10:12.02:154,12,0	0/0:17,0:5:5.21:0,5,61	0/0:25,0:11:26.82:0,27,260	1/1:20,7:27:4.94:173,5,0	0/1:19,0:19:3.75:4,0,8	0/0:38,0:37:11.24:0,11,69	0/1:25,0:24:90.77:91,0,138	0/0:24,0:24:65.77:0,66,896	1/1:19,8:26:35.15:509,35,0	1/1:15,5:20:17.91:232,18,0	0/1:22,0:22:8.03:8,0,57	1/1:11,2:13:16.25:155,16,0	1/1:18,1:19:16.05:149,16,0	0/1:11,0:10:16.58:31,0,17	0/1:19,0:19:2.85:3,0,4	1/1:22,6:28:39.41:356,39,0	0/1:22,0:22:19.27:38,0,19	0/1:14,0:14:55.58:86,0,56	1/1:20,0:20:15.22:76,15,0	0/0:25,0:22:2.35:0,2,11	1/1:24,0:23:8.15:24,8,0	1/1:16,1:16:14.60:196,15,0	1/1:40,6:45:53.96:631,54,0	0/1:24,0:24:1.63:2,0,7	1/1:17,5:22:23.54:489,24,0	1/1:15,3:18:20.13:232,20,0	1/1:8,5:13:6.84:163,7,0
chr10	18443496	.	A	ACGCG	787.71	PASS	AB=0.985;AC=10;AF=0.192;AN=52;BaseQRankSum=-1.612;DP=632;FS=0.735;HRun=0;HaplotypeScore=205.8104;InbreedingCoeff=-0.0039;MQ=44.77;MQ0=6;MQRankSum=-5.661;QD=4.19;ReadPosRankSum=-0.123;VQSLOD=2.6056;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:37,1:38:0.17:0,0,0	0/0:10,0:10:12.28:0,12,63	0/0:14,0:5:4.29:0,4,117	0/0:23,0:11:27.09:0,27,446	0/0:27,0:27:17.39:0,17,107	0/0:19,0:19:2.69:0,3,24	0/0:37,0:36:8.82:0,9,62	0/1:25,0:24:99:275,0,139	0/0:24,0:24:63.77:0,64,1094	0/0:28,0:27:48.62:0,49,339	0/0:21,0:21:17.24:0,17,102	0/1:21,1:22:35.52:48,0,36	0/1:15,0:15:2.24:2,0,26	0/0:20,0:20:16.76:0,17,87	0/1:12,0:11:55.12:78,0,55	0/1:18,1:19:18.60:42,0,19	0/0:28,0:28:21.55:0,22,139	0/1:22,0:22:23.34:108,0,23	0/1:14,0:14:53.70:305,0,54	1/1:21,0:21:4.44:58,4,0	./.	./.	0/0:18,0:17:13.61:0,14,74	0/0:49,0:48:46.02:0,46,308	0/0:24,1:25:2.99:0,3,25	0/0:22,0:22:43.27:0,43,308	0/0:17,0:17:11.33:0,11,103	0/0:15,0:15:13.56:0,14,93
chr10	18443498	.	A	ACGCGCG	2012.62	PASS	AB=0.730;AC=17;AF=0.327;AN=52;BaseQRankSum=-5.468;DP=645;FS=1.398;HRun=0;HaplotypeScore=218.9910;InbreedingCoeff=0.5890;MQ=45.73;MQ0=4;MQRankSum=-4.932;QD=8.15;ReadPosRankSum=-2.534;VQSLOD=2.4171;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:9,30:42:0:0,0,0	0/0:10,0:10:12.12:0,12,82	0/1:10,0:5:2.59:3,0,153	0/0:19,0:10:27.09:0,27,583	0/0:27,0:27:17.83:0,18,142	0/1:2,16:21:0.07:1,0,0	0/0:5,4:36:0.14:0,0,0	0/1:25,0:24:34.55:513,0,35	0/0:23,0:23:45.57:0,46,1297	0/0:27,0:26:56.49:0,56,487	0/0:21,0:21:14.92:0,15,107	1/1:5,14:22:3:104,3,0	0/0:18,0:18:9.48:0,9,76	0/0:20,0:20:18.77:0,19,129	1/1:3,1:11:6.02:171,6,0	1/1:7,11:19:2.89:107,3,0	0/0:28,0:28:30.26:0,30,214	1/1:5,1:25:14.85:373,15,0	1/1:18,2:20:23.55:820,24,0	1/1:4,19:24:3.16:72,3,0	./.	./.	0/0:16,0:15:11.34:0,11,76	0/0:48,0:47:44.13:0,44,418	0/1:6,21:27:0.26:0,0,0	0/0:22,0:22:60.40:0,60,566	0/0:18,0:18:14.70:0,15,131	0/0:14,0:14:9.83:0,10,71
chr10	18443500	.	G	GCA	5093.90	PASS	AB=1.000;AC=42;AF=0.750;AN=56;BaseQRankSum=7.918;DP=646;FS=14.018;HRun=0;HaplotypeScore=190.5970;InbreedingCoeff=0.5708;MQ=46.35;MQ0=4;MQRankSum=-1.236;QD=9.58;ReadPosRankSum=3.286;VQSLOD=3.5606;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:43:5.02:0,5,63	1/1:3,7:10:9.02:153,9,0	0/0:9,0:6:11.13:0,11,114	0/0:17,0:10:25.55:0,26,251	1/1:7,20:27:17.91:306,18,0	1/1:21,0:21:3.66:10,4,0	0/1:35,0:34:0.13:0,0,0	1/1:23,0:22:0.59:2,1,0	0/0:22,0:23:53.67:0,54,677	1/1:7,21:27:59.35:779,59,0	1/1:3,17:20:14.91:255,15,0	1/1:20,0:20:2.97:22,3,0	1/1:1,17:18:17.93:267,18,0	1/1:3,19:23:17.60:291,18,0	1/1:11,0:10:8.14:34,8,0	1/1:19,0:19:2.76:10,3,0	1/1:4,24:28:44.99:632,45,0	1/1:22,0:22:10.44:49,10,0	0/1:19,0:19:3.50:3,0,21	0/1:26,0:26:4.58:44,0,5	0/0:22,0:19:2.99:0,3,24	1/1:25,0:26:8.15:24,8,0	1/1:3,13:16:11.50:203,11,0	1/1:7,42:49:42.12:712,42,0	0/1:27,0:27:1.38:1,0,20	1/1:6,16:22:31.98:732,32,0	1/1:1,17:20:27.81:426,28,0	1/1:8,12:20:9.03:138,9,0
chr10	18444321	.	C	CATATAT	1430.20	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-3.686;DP=747;FS=10.579;HRun=0;HaplotypeScore=235.5676;InbreedingCoeff=0.8748;MQ=57.68;MQ0=2;MQRankSum=-1.354;QD=7.61;ReadPosRankSum=-2.111;VQSLOD=1.1275;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:38,0:39:17.54:246,18,0	0/0:15,0:15:27.04:0,27,488	0/0:34,0:25:27.99:0,28,471	0/0:37,0:24:17.64:0,18,325	0/0:36,0:36:75.23:0,75,1541	1/1:9,8:18:8.77:201,9,0	1/1:13,11:24:6.93:80,7,0	0/0:33,0:33:54.78:0,55,931	0/0:28,0:28:78.27:0,78,1677	0/0:45,0:45:99:0,105,2216	0/0:20,0:20:30.10:0,30,657	1/1:8,11:23:18.03:455,18,0	0/0:26,0:27:38.44:0,38,812	0/0:39,0:39:54.05:0,54,1050	1/1:11,10:22:15.02:209,15,0	1/1:4,3:9:6.01:100,6,0	0/0:23,0:23:39.13:0,39,855	1/1:5,2:7:6.02:203,6,0	0/0:19,0:19:34.13:0,34,480	0/0:30,0:30:33.50:0,34,401	0/0:37,0:36:44.99:0,45,443	1/1:8,10:19:2.64:50,3,0	0/0:18,0:18:27.09:0,27,588	0/0:33,0:33:66.17:0,66,1320	1/1:12,13:27:3.01:75,3,0	0/0:32,0:32:84.28:0,84,1800	0/0:37,0:37:66.23:0,66,1416	0/0:16,0:16:27.09:0,27,561
chr10	18444332	.	A	ATG	2883.66	PASS	AB=1.000;AC=24;AF=0.429;AN=56;BaseQRankSum=-1.306;DP=746;FS=1.474;HRun=0;HaplotypeScore=207.5146;InbreedingCoeff=0.8329;MQ=55.37;MQ0=4;MQRankSum=-3.241;QD=9.27;ReadPosRankSum=-3.888;VQSLOD=2.7227;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:41:20.65:163,21,0	0/0:13,0:13:27.07:0,27,329	0/0:31,0:17:25.64:0,26,287	0/0:32,0:15:14.19:0,14,212	0/0:35,0:35:65.93:0,66,788	1/1:19,0:19:6.74:29,7,0	0/1:25,0:25:0.17:0,0,0	1/1:24,12:36:77.12:1022,77,0	0/0:31,0:31:87.21:0,87,1035	0/0:42,0:42:84.22:0,84,1007	0/0:20,0:20:36.04:0,36,404	1/1:23,0:23:9.92:41,10,0	0/0:25,0:25:39.05:0,39,481	0/0:38,0:38:60.12:0,60,698	1/1:19,0:19:2.99:23,3,0	0/1:9,0:9:0:0,0,0	0/0:25,0:25:45.09:0,45,527	1/1:8,0:8:4.41:14,4,0	1/1:14,8:22:35.15:568,35,0	1/1:13,17:30:32.65:448,33,0	1/1:25,10:34:51.11:747,51,0	1/1:21,0:21:3.22:13,3,0	0/0:21,0:21:30.02:0,30,312	0/0:35,0:35:72.16:0,72,856	1/1:22,0:23:2.74:12,3,0	0/0:34,0:34:69.20:0,69,843	0/0:37,0:37:57.12:0,57,676	0/0:16,0:16:27.05:0,27,326
chr10	18444347	.	A	ATG	10366.50	PASS	AB=0.910;AC=40;AF=0.714;AN=56;BaseQRankSum=2.659;DP=751;FS=2.210;HRun=0;HaplotypeScore=185.2711;InbreedingCoeff=0.2667;MQ=56.78;MQ0=7;MQRankSum=2.791;QD=16.33;ReadPosRankSum=3.071;VQSLOD=4.9294;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:38,0:38:2.21:194,2,0	0/1:3,9:13:0.80:274,0,1	0/0:40,0:20:31.58:0,32,409	0/0:40,0:18:10.34:0,10,287	1/1:9,22:31:50.64:823,51,0	1/1:15,0:15:7.95:40,8,0	0/1:26,0:26:0.17:0,0,0	0/1:36,0:36:81.60:405,0,82	0/0:35,0:35:93.29:0,93,1294	1/1:4,31:35:80.66:1239,81,0	1/1:3,23:26:45.15:738,45,0	1/1:20,0:20:4.92:26,5,0	1/1:2,27:29:37.84:630,38,0	1/1:5,37:42:18.14:840,18,0	0/1:15,0:15:0:0,0,0	0/1:7,0:7:0:0,0,0	1/1:0,28:28:54.18:887,54,0	0/1:9,0:9:14.47:32,0,14	0/1:21,0:21:4.86:165,0,5	0/1:33,0:33:6.31:251,0,6	0/1:37,0:36:12.12:322,0,12	1/1:17,0:17:3.22:13,3,0	1/1:3,15:19:24.08:385,24,0	1/1:8,31:41:45.82:1057,46,0	1/1:22,0:22:2.74:12,3,0	1/1:3,27:30:78.27:1106,78,0	1/1:6,23:29:35.70:564,36,0	0/1:2,14:16:15.51:363,0,16
chr10	18444360	.	T	TGCGCGCGTGTGTGC	1494.34	PASS	AB=0.593;AC=13;AF=0.232;AN=56;BaseQRankSum=-3.302;DP=773;FS=1.995;HRun=0;HaplotypeScore=313.1983;InbreedingCoeff=0.4444;MQ=61.43;MQ0=7;MQRankSum=-3.340;QD=7.51;ReadPosRankSum=-6.976;VQSLOD=0.4146;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:39:22.58:0,23,329	0/0:11,0:11:21.07:0,21,598	0/0:44,0:19:17.77:0,18,239	0/0:42,0:18:5.70:0,6,147	0/0:28,0:28:60.05:0,60,1372	1/1:3,6:19:2.23:206,2,0	1/1:9,16:40:1.66:4,2,0	0/1:8,0:31:99:259,0,488	0/0:35,0:35:90.06:0,90,2835	0/0:43,0:43:31.18:0,31,1872	0/0:23,0:23:48.15:0,48,1170	1/1:9,8:33:5.33:412,5,0	0/0:29,0:29:14.81:0,15,829	0/0:35,0:35:66.21:0,66,1741	0/0:2,3:12:0:0,0,1	1/1:8,0:9:3.01:64,3,0	0/0:24,0:24:58.81:0,59,1387	1/1:2,6:12:9.03:502,9,0	0/1:9,0:23:99:176,0,225	0/1:9,0:32:11.23:11,0,498	0/0:13,0:36:1.54:0,2,519	0/0:5,5:16:0.47:0,0,1	0/0:17,0:17:29.92:0,30,725	0/0:37,0:37:84.26:0,84,2059	0/0:4,11:25:0.47:0,0,1	0/0:31,0:31:15.98:0,16,1452	0/0:22,0:22:36.49:0,36,866	0/0:22,0:22:45.06:0,45,897
chr10	18444914	.	C	CA	24000.57	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-11.217;DP=698;FS=0.464;HRun=2;HaplotypeScore=59.2800;InbreedingCoeff=0.9958;MQ=89.85;MQ0=0;MQRankSum=-7.384;QD=38.84;ReadPosRankSum=3.966;VQSLOD=5.2718;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,70:72:99:2713,190,0	1/1:0,11:11:33.11:475,33,0	0/0:29,0:29:72.22:0,72,873	0/0:22,0:22:54.16:0,54,653	1/1:1,14:15:45.09:605,45,0	1/1:0,15:15:45.15:648,45,0	1/1:2,14:16:39.13:562,39,0	1/1:3,40:43:99:1706,120,0	0/0:29,0:29:84.22:0,84,1012	1/1:2,30:32:90.30:1293,90,0	1/1:0,21:21:60.20:853,60,0	1/1:0,16:16:45.15:648,45,0	1/1:1,14:15:39.13:562,39,0	1/1:1,22:23:63.21:907,63,0	1/1:0,23:23:69.23:994,69,0	1/1:1,19:20:16.98:697,17,0	1/1:4,22:26:66.22:951,66,0	1/1:1,13:14:36.12:518,36,0	1/1:1,19:20:60.17:838,60,0	1/1:2,30:32:84.28:1210,84,0	1/1:1,30:31:81.27:1167,81,0	1/1:0,25:25:72.24:1037,72,0	1/1:1,36:37:99:1426,99,0	1/1:1,21:22:57.19:821,57,0	1/1:1,17:18:48.16:691,48,0	1/1:3,22:25:66.22:951,66,0	1/1:1,33:34:93.31:1339,93,0	1/1:0,12:12:27.09:389,27,0
chr10	18445556	.	TG	T	8053.45	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=10.670;DP=510;FS=1.131;HRun=1;HaplotypeScore=51.8894;InbreedingCoeff=0.9990;MQ=89.59;MQ0=0;MQRankSum=-2.137;QD=38.91;ReadPosRankSum=2.280;VQSLOD=5.3252;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,117,1858	1/1:0,14:14:42.14:587,42,0	0/0:22,0:22:66.10:0,66,977	0/0:19,0:19:51.16:0,51,757	1/1:0,21:21:51.17:713,51,0	0/0:8,0:7:24.08:0,24,384	0/0:19,0:19:48.10:0,48,737	0/0:18,0:18:54.17:0,54,800	0/0:17,0:17:51.17:0,51,815	1/1:0,18:18:54.15:734,54,0	1/1:0,17:17:48.16:671,48,0	0/0:16,0:16:48.16:0,48,766	1/1:0,18:18:45.15:629,45,0	1/1:0,12:12:36.12:503,36,0	0/0:11,0:11:33.11:0,33,524	0/0:8,0:8:24.08:0,24,383	1/1:0,22:22:60.20:839,60,0	0/0:11,0:11:30.10:0,30,479	0/0:18,0:18:48.12:0,48,660	0/0:20,0:20:59.87:0,60,922	0/0:37,0:37:99:0,111,1726	0/0:13,0:13:39.05:0,39,592	1/1:0,17:17:48.16:671,48,0	1/1:0,22:22:63.21:881,63,0	0/0:23,0:23:69.24:0,69,1098	1/1:0,23:23:69.21:946,69,0	1/1:0,13:13:39.13:545,39,0	1/1:0,10:10:24.08:336,24,0
chr10	18445626	.	C	CTT	2659.42	PASS	AB=0.954;AC=44;AF=0.786;AN=56;BaseQRankSum=-1.466;DP=473;FS=3.800;HRun=17;HaplotypeScore=80.7764;InbreedingCoeff=0.2170;MQ=69.73;MQ0=19;MQRankSum=-4.325;QD=6.27;ReadPosRankSum=-1.898;VQSLOD=-0.3354;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:17,2:29:26.28:245,26,0	1/1:7,0:6:6.02:71,6,0	0/1:53,0:22:8.99:9,0,59	0/0:30,0:14:10.75:0,11,44	0/1:19,1:19:4.26:84,0,4	1/1:8,0:12:15.02:147,15,0	1/1:11,0:16:6.01:57,6,0	0/1:24,1:26:7.12:7,0,106	0/0:7,0:7:2.42:0,2,11	1/1:17,1:21:29.65:231,30,0	1/1:20,2:24:8.10:191,8,0	1/1:8,0:10:17.33:143,17,0	1/1:6,2:9:11.18:96,11,0	1/1:8,1:9:11.93:105,12,0	1/1:12,0:14:6.01:59,6,0	1/1:6,0:12:9.01:85,9,0	1/1:16,4:21:26.04:269,26,0	1/1:8,1:9:4.36:34,4,0	0/1:14,0:16:20.82:45,0,21	0/0:11,0:12:8.14:0,8,53	0/1:15,0:15:26.38:26,0,65	1/1:11,0:15:14.92:135,15,0	1/1:8,0:8:8.89:61,9,0	0/1:9,1:11:21.33:120,0,21	1/1:14,0:16:13.23:107,13,0	1/1:10,3:15:17.39:167,17,0	1/1:12,2:16:2.26:185,2,0	1/1:3,2:6:12.03:133,12,0
chr10	18446128	.	AT	A	2680.71	PASS	AB=0.854;AC=28;AF=0.500;AN=56;BaseQRankSum=6.813;DP=335;FS=11.324;HRun=12;HaplotypeScore=36.1648;InbreedingCoeff=0.8179;MQ=67.48;MQ0=21;MQRankSum=1.323;QD=13.82;ReadPosRankSum=2.035;VQSLOD=2.7424;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,22:25:34.70:430,35,0	1/1:2,3:3:8.97:70,9,0	0/0:19,0:14:7.10:0,7,132	0/0:8,0:4:8.81:0,9,73	1/1:2,12:13:35.85:278,36,0	0/0:12,0:11:27.01:0,27,264	0/0:10,0:10:15.02:0,15,146	0/0:14,0:14:23.69:0,24,330	0/0:10,0:10:20.96:0,21,191	1/1:2,10:12:29.88:232,30,0	1/1:2,7:9:20.92:163,21,0	0/0:13,0:14:35.87:0,36,338	1/1:2,6:8:17.93:139,18,0	1/1:2,4:6:14.67:100,15,0	0/0:9,0:9:21:0,21,202	0/0:5,0:5:12.02:0,12,122	1/1:7,17:23:44.81:348,45,0	0/1:8,2:8:25.43:25,0,131	0/0:15,0:14:31.24:0,31,287	0/1:12,2:13:10.18:10,0,266	0/0:12,0:11:26.89:0,27,256	0/0:5,0:5:12.02:0,12,122	1/1:2,10:13:31.82:231,32,0	1/1:1,8:9:23.91:186,24,0	0/0:7,0:7:21:0,21,202	1/1:1,10:11:29.84:227,30,0	1/1:5,10:14:29.88:232,30,0	1/1:5,10:11:29.84:232,30,0
chr10	18446405	.	G	GGTAGTGGCTT	989.94	PASS	AC=8;AF=0.571;AN=14;BaseQRankSum=-2.228;DP=255;FS=16.154;HRun=0;HaplotypeScore=15.4942;MQ=14.21;MQ0=109;MQRankSum=-1.246;QD=26.05;ReadPosRankSum=-0.678;VQSLOD=0.5533;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	./.	./.	./.	./.	0/0:8,0:2:6.02:0,6,189	./.	0/0:4,0:1:3.01:0,3,60	./.	./.	1/1:8,1:4:6.02:307,6,0	./.	./.	./.	./.	./.	0/0:9,0:1:3.01:0,3,79	./.	./.	./.	1/1:9,6:6:6.02:307,6,0	./.	1/1:8,2:5:3.01:154,3,0	1/1:2,2:3:6.02:308,6,0	./.
chr10	18452936	.	T	TCACCC	33157.25	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=-11.240;DP=542;FS=0.000;HRun=0;HaplotypeScore=84.1099;InbreedingCoeff=0.9990;MQ=63.96;MQ0=0;MQRankSum=-6.959;QD=78.57;ReadPosRankSum=6.142;VQSLOD=6.7082;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,12:15:33.11:1046,33,0	1/1:0,8:8:24.08:761,24,0	0/0:10,0:10:30.09:0,30,609	0/0:11,0:11:33.11:0,33,657	1/1:5,23:28:72.25:2271,72,0	1/1:1,20:22:60.21:1846,60,0	1/1:4,11:16:39.13:1207,39,0	0/0:28,0:28:84.29:0,84,1813	0/0:12,0:12:36.12:0,36,782	1/1:3,20:24:69.23:2059,69,0	1/1:5,18:24:48.16:1514,48,0	1/1:3,12:15:42.14:1320,42,0	1/1:6,9:15:42.10:1129,42,0	1/1:0,11:13:27.09:856,27,0	1/1:3,15:20:54.14:1630,54,0	1/1:2,10:12:36.12:1136,36,0	1/1:2,10:13:30.10:946,30,0	1/1:0,20:20:57.20:1807,57,0	0/0:13,0:13:39.13:0,39,847	0/0:28,0:28:84.26:0,84,1743	0/0:18,0:18:54.17:0,54,1115	1/1:6,30:38:96.33:3023,96,0	1/1:3,17:23:53.86:1697,54,0	1/1:3,12:15:33.08:952,33,0	1/1:8,18:26:63.22:1944,63,0	1/1:7,14:22:66.20:1940,66,0	1/1:9,21:33:72.25:2271,72,0	1/1:2,17:19:57.20:1803,57,0
chr10	18453402	.	TA	T	2695.24	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=12.007;DP=502;FS=6.541;HRun=9;HaplotypeScore=47.8523;InbreedingCoeff=0.9388;MQ=71.86;MQ0=0;MQRankSum=-0.783;QD=19.96;ReadPosRankSum=3.172;VQSLOD=4.0073;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:57.17:0,57,658	0/0:8,0:8:24.07:0,24,277	0/1:12,0:12:1.71:2,0,87	0/0:10,0:9:14.08:0,14,135	0/0:23,0:23:63.19:0,63,726	1/1:1,17:18:51.03:467,51,0	1/1:1,14:15:42.02:384,42,0	0/0:20,0:20:60.16:0,60,674	0/0:19,0:19:54.13:0,54,604	0/0:31,0:31:78.23:0,78,900	0/0:32,0:32:96.28:0,96,1106	1/1:0,11:11:33.02:302,33,0	0/0:16,0:16:48.13:0,48,544	0/0:12,0:12:30.09:0,30,346	1/1:2,15:17:45.02:412,45,0	1/1:4,13:17:33.01:302,33,0	0/0:20,0:20:54.16:0,54,622	1/1:0,13:13:35.94:319,36,0	0/0:25,0:25:66.19:0,66,753	0/0:44,0:44:99:0,126,1445	0/0:6,0:6:12.04:0,12,138	1/1:1,14:15:36:329,36,0	0/0:25,0:25:62.67:0,63,695	0/0:9,0:9:27.04:0,27,297	1/1:1,16:17:42.02:384,42,0	0/0:18,0:18:54.16:0,54,623	0/0:23,0:23:57.17:0,57,654	0/0:6,0:6:18.05:0,18,208
chr10	18456028	.	T	TA	2152.98	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-10.152;DP=427;FS=0.000;HRun=7;HaplotypeScore=37.0382;InbreedingCoeff=0.9029;MQ=59.52;MQ0=1;MQRankSum=-1.980;QD=27.25;ReadPosRankSum=-4.778;VQSLOD=1.5347;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:84.13:0,84,811	0/0:3,0:3:9.01:0,9,87	0/0:3,0:3:6.01:0,6,58	0/0:7,0:7:18.01:0,18,168	0/0:23,0:23:54.03:0,54,506	0/0:21,0:21:57.09:0,57,550	0/0:10,0:10:18.02:0,18,174	1/1:8,28:36:87.22:1023,87,0	0/0:12,0:12:36.06:0,36,348	0/0:14,0:14:39.05:0,39,370	0/0:21,0:21:54.07:0,54,515	0/0:7,0:7:21.03:0,21,203	0/0:7,0:7:15.01:0,15,139	0/0:9,0:9:24.04:0,24,232	0/0:20,0:20:51.07:0,51,492	0/0:11,0:11:27.04:0,27,261	0/0:23,0:23:60.09:0,60,579	0/0:27,0:27:66.09:0,66,631	1/1:4,18:22:54.17:651,54,0	1/1:2,14:16:42.09:491,42,0	1/1:1,4:5:12.04:145,12,0	0/0:4,0:4:9.01:0,9,83	0/0:12,0:12:30.05:0,30,289	0/0:8,0:8:18.03:0,18,174	0/0:20,0:20:51.07:0,51,492	0/0:26,0:26:60.08:0,60,579	0/0:24,0:24:66.09:0,66,633	0/0:6,0:5:8.22:0,8,86
chr10	18456323	.	GA	G	5348.51	PASS	AB=0.526;AC=41;AF=0.732;AN=56;BaseQRankSum=4.237;DP=423;FS=0.000;HRun=11;HaplotypeScore=44.4213;InbreedingCoeff=0.8513;MQ=60.67;MQ0=13;MQRankSum=-0.131;QD=18.07;ReadPosRankSum=5.412;VQSLOD=5.1469;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,29:35:70.92:572,71,0	1/1:1,6:7:17.98:148,18,0	0/0:25,1:10:22.84:0,23,188	0/0:22,0:10:29.82:0,30,278	1/1:3,12:15:31.97:252,32,0	1/1:3,14:17:41.94:345,42,0	1/1:4,8:12:20.97:172,21,0	0/0:22,2:25:7.64:0,8,468	0/0:8,0:8:21.04:0,21,215	1/1:5,17:22:47.53:392,48,0	1/1:3,11:13:32.92:266,33,0	1/1:3,11:14:26.97:222,27,0	1/1:0,6:6:14.98:123,15,0	1/1:3,9:11:23.96:197,24,0	1/1:0,8:8:20.98:172,21,0	0/1:1,9:10:8.01:148,0,8	1/1:2,26:29:73.95:597,74,0	1/1:3,18:21:47.94:394,48,0	0/0:22,0:23:47.93:0,48,484	0/0:13,0:13:36.49:0,36,365	0/0:9,0:9:24.06:0,24,256	1/1:2,9:11:0.86:204,1,0	1/1:1,4:5:11.99:99,12,0	1/1:2,6:9:14.78:126,15,0	1/1:2,7:9:23.33:180,23,0	1/1:0,15:15:41.94:345,42,0	1/1:5,10:15:20.97:172,21,0	1/1:1,9:10:26.97:222,27,0
chr10	18457395	.	A	AAAAT	878.55	PASS	AB=0.964;AC=22;AF=0.423;AN=52;BaseQRankSum=3.350;DP=232;FS=2.897;HRun=0;HaplotypeScore=54.7840;InbreedingCoeff=0.5067;MQ=31.90;MQ0=23;MQRankSum=0.697;QD=11.71;ReadPosRankSum=3.326;VQSLOD=2.2163;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:11:25.56:0,26,180	1/1:3,0:3:4.26:65,4,0	0/0:28,0:4:8.92:0,9,79	0/0:31,0:5:8.81:0,9,78	1/1:5,0:4:5.91:44,6,0	0/0:9,0:9:13.14:0,13,87	./.	0/0:34,0:27:47.57:0,48,326	0/0:3,0:3:6.01:0,6,76	1/1:7,0:6:13.61:86,14,0	0/1:5,1:4:17.77:59,0,18	0/0:4,0:2:3.44:0,3,21	1/1:3,0:3:4.51:27,5,0	0/1:3,0:3:1.39:49,0,1	0/0:3,0:3:3.76:0,4,17	0/0:4,0:4:3.38:0,3,11	1/1:8,2:11:18.47:226,18,0	0/0:6,0:5:2.78:0,3,16	0/0:13,0:9:24.87:0,25,173	0/0:9,0:9:11.02:0,11,116	./.	0/0:1,0:1:2.99:0,3,23	1/1:7,0:5:2.42:53,2,0	0/1:2,0:1:0:0,0,0	0/1:10,0:10:4.89:5,0,73	1/1:4,1:5:10.30:121,10,0	1/1:4,1:4:8.73:98,9,0	1/1:7,1:8:6.50:211,6,0
chr10	18457400	.	AT	A	1060.93	PASS	AB=0.917;AC=38;AF=0.792;AN=48;BaseQRankSum=0.528;DP=218;FS=2.989;HRun=1;HaplotypeScore=46.7356;InbreedingCoeff=0.2636;MQ=31.02;MQ0=16;MQRankSum=-1.072;QD=6.89;ReadPosRankSum=-0.207;VQSLOD=0.6164;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:12,0:12:10.86:23,0,11	1/1:1,2:3:5.75:50,6,0	0/0:28,0:4:9.23:0,9,62	0/0:31,0:5:9.41:0,9,60	1/1:2,3:4:4.30:15,4,0	1/1:7,1:8:15.68:99,16,0	./.	1/1:34,1:27:3.77:147,4,0	0/0:3,0:3:6:0,6,57	1/1:2,4:5:9.34:42,9,0	0/1:2,2:4:6.05:19,0,6	1/1:2,1:2:5.94:41,6,0	1/1:0,2:2:2.50:10,2,0	1/1:2,0:2:5.69:47,6,0	1/1:1,1:2:5.91:38,6,0	1/1:4,0:4:10.37:60,10,0	1/1:8,1:9:18.44:85,18,0	1/1:6,1:6:13.59:72,14,0	0/1:11,0:8:35.78:55,0,36	0/1:9,0:9:11.22:11,0,34	./.	./.	1/1:1,5:5:5.75:49,6,0	./.	1/1:7,3:10:17.66:148,18,0	1/1:4,0:4:10.30:42,10,0	1/1:3,1:4:3.16:29,3,0	1/1:5,3:8:16.57:117,17,0
chr10	18457401	.	TA	T	567.37	PASS	AB=0.937;AC=27;AF=0.563;AN=48;BaseQRankSum=3.709;DP=217;FS=13.202;HRun=14;HaplotypeScore=48.6673;InbreedingCoeff=0.1063;MQ=30.82;MQ0=16;MQRankSum=0.000;QD=4.02;ReadPosRankSum=-0.976;VQSLOD=-0.3811;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:10,1:11:6.34:6,0,66	0/1:3,0:3:2.79:6,0,3	0/0:27,0:4:8.65:0,9,86	0/0:31,0:5:11.52:0,12,125	0/1:5,0:4:0.55:16,0,1	0/0:8,0:8:5.93:0,6,27	./.	0/1:26,9:27:70.05:70,0,77	0/0:3,0:3:6.02:0,6,83	1/1:5,1:5:0.71:30,1,0	0/1:3,1:4:21.72:33,0,22	1/1:3,0:2:0.42:1,0,0	0/0:2,0:2:2.50:0,2,9	1/1:1,1:2:5.90:42,6,0	0/0:2,0:2:0.89:0,1,2	1/1:3,1:4:4.93:46,5,0	1/1:7,2:9:5.24:72,5,0	1/1:6,2:7:2.61:46,3,0	0/1:10,1:8:19.90:20,0,38	0/1:8,0:8:15.84:16,0,39	./.	./.	0/1:6,0:5:2.34:11,0,2	./.	1/1:9,1:10:12.37:65,12,0	1/1:3,1:4:11.90:91,12,0	0/1:4,0:4:9.98:14,0,10	1/1:6,2:8:17.65:123,18,0
chr10	18457402	.	A	AAAT	1668.02	PASS	AB=0.881;AC=24;AF=0.480;AN=50;BaseQRankSum=4.105;DP=217;FS=14.952;HRun=0;HaplotypeScore=54.7521;InbreedingCoeff=-0.0491;MQ=30.79;MQ0=16;MQRankSum=2.535;QD=11.35;ReadPosRankSum=-1.372;VQSLOD=1.1117;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:8,1:9:23.50:24,0,128	0/1:2,1:3:3.14:6,0,3	0/0:28,0:4:8.53:0,9,121	0/0:31,0:5:11.91:0,12,152	1/1:4,1:4:6.01:78,6,0	0/1:8,0:8:2.85:3,0,43	./.	0/1:35,0:27:90.72:91,0,317	0/0:3,0:3:6.02:0,6,102	0/1:4,1:4:8.77:102,0,9	0/1:3,1:4:28.74:99,0,29	0/0:3,0:2:2.48:0,2,19	0/0:2,0:2:2.34:0,2,10	1/1:2,0:2:5.91:60,6,0	0/0:2,0:2:1.25:0,1,3	1/1:4,1:5:5.89:96,6,0	1/1:7,3:10:10.19:268,10,0	0/1:8,1:8:10.75:114,0,11	0/1:12,0:9:70.51:71,0,81	0/1:7,1:8:39.09:53,0,39	./.	./.	0/1:6,0:5:2.92:11,0,3	0/0:1,0:1:0:0,0,0	0/1:8,2:10:18.67:156,0,19	1/1:1,3:4:12.04:237,12,0	0/1:2,1:4:8.54:94,0,9	1/1:6,2:8:17.78:252,18,0
chr10	18457406	.	TA	T	1732.38	PASS	AC=40;AF=0.833;AN=48;BaseQRankSum=0.654;DP=211;FS=6.205;HRun=4;HaplotypeScore=46.2807;InbreedingCoeff=0.5167;MQ=31.54;MQ0=15;MQRankSum=-1.224;QD=11.71;ReadPosRankSum=1.263;VQSLOD=0.9767;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,1:9:7.15:68,7,0	1/1:2,1:3:2.74:12,3,0	0/0:27,0:4:8.83:0,9,83	0/0:31,0:5:9.01:0,9,108	1/1:1,4:4:5.20:27,5,0	1/1:4,2:6:5.65:45,6,0	./.	1/1:17,17:26:37.49:500,37,0	0/0:2,0:2:6.02:0,6,83	1/1:2,3:4:11.23:65,11,0	1/1:1,3:4:5.26:43,5,0	1/1:3,0:2:0.43:1,0,0	1/1:0,2:2:2.27:8,2,0	1/1:1,1:2:2.59:28,3,0	0/0:2,0:2:0.47:0,0,1	1/1:1,3:4:8.15:82,8,0	1/1:4,3:10:12.68:114,13,0	1/1:3,6:9:9.42:120,9,0	1/1:9,4:10:22.53:210,23,0	1/1:3,3:6:8.81:75,9,0	./.	./.	1/1:3,3:5:2.68:11,3,0	./.	1/1:1,9:10:20.89:188,21,0	1/1:2,3:5:14.93:129,15,0	1/1:3,1:4:5.75:34,6,0	1/1:5,3:8:11.30:95,11,0
chr10	18457407	.	A	AAAT	3003.13	PASS	AC=40;AF=0.800;AN=50;BaseQRankSum=-1.087;DP=209;FS=7.048;HRun=0;HaplotypeScore=48.6849;InbreedingCoeff=0.5123;MQ=31.94;MQ0=14;MQRankSum=-0.604;QD=20.29;ReadPosRankSum=1.076;VQSLOD=2.2353;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,1:8:5.28:119,5,0	1/1:1,1:2:2.74:12,3,0	0/0:26,0:4:8.99:0,9,94	0/0:30,0:5:9.45:0,9,103	1/1:5,0:4:5.23:63,5,0	1/1:6,0:6:5.78:50,6,0	./.	1/1:36,0:27:33.07:563,33,0	0/0:2,0:2:6.02:0,6,93	1/1:4,1:4:11.44:138,11,0	1/1:3,1:4:5.10:110,5,0	1/1:3,0:2:0.39:1,0,0	1/1:2,0:2:2.37:8,2,0	1/1:2,0:2:2.62:46,3,0	0/0:2,0:2:0.47:0,0,1	1/1:4,0:4:8.18:152,8,0	1/1:7,0:10:20.85:302,21,0	1/1:9,0:9:7.57:171,8,0	1/1:11,2:10:27.90:362,28,0	1/1:5,1:6:9.03:152,9,0	./.	./.	1/1:5,0:4:2.68:11,3,0	0/0:1,0:1:0:0,0,0	1/1:9,1:10:20.94:253,21,0	1/1:4,2:6:15.05:277,15,0	1/1:3,1:4:5.94:108,6,0	1/1:6,2:8:11.46:228,11,0
chr10	18457434	.	AT	A	1081.95	PASS	AB=0.660;AC=6;AF=0.107;AN=56;BaseQRankSum=-2.941;DP=207;FS=3.303;HRun=1;HaplotypeScore=46.2258;InbreedingCoeff=0.3630;MQ=62.84;MQ0=7;MQRankSum=1.923;QD=18.34;ReadPosRankSum=0.561;VQSLOD=3.8628;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:8:20.88:0,21,221	0/0:8,0:8:21.01:0,21,251	0/0:5,1:3:8.98:0,9,77	0/0:10,0:5:5.93:0,6,61	0/0:8,0:7:21.04:0,21,247	0/0:7,0:7:17.98:0,18,202	0/0:1,0:1:3.01:0,3,39	0/1:15,15:23:99:444,0,130	0/0:6,0:6:18.06:0,18,237	0/0:7,0:7:21.07:0,21,281	0/0:6,0:6:17.99:0,18,223	0/0:3,0:3:9.02:0,9,101	0/0:3,0:3:9.03:0,9,116	0/0:5,0:5:11.97:0,12,139	0/0:4,0:4:12.03:0,12,146	0/0:5,0:5:15.03:0,15,193	0/0:12,0:12:33.08:0,33,427	0/0:7,0:7:15:0,15,188	0/1:8,9:15:22.07:353,0,22	1/1:2,9:11:14.29:365,14,0	1/1:0,1:1:3.01:42,3,0	0/0:4,0:4:12.01:0,12,127	0/0:4,0:4:12.04:0,12,154	0/0:2,0:2:2.99:0,3,23	0/0:5,0:5:9.03:0,9,125	0/0:10,0:10:30.07:0,30,387	0/0:7,0:7:21:0,21,240	0/0:10,0:9:30.10:0,30,404
chr10	18459003	.	A	AT	7270.47	PASS	AB=1.000;AC=39;AF=0.722;AN=54;BaseQRankSum=-11.617;DP=435;FS=1.408;HRun=9;HaplotypeScore=45.7018;InbreedingCoeff=0.8953;MQ=72.97;MQ0=1;MQRankSum=0.067;QD=24.40;ReadPosRankSum=2.885;VQSLOD=5.4814;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:76.03:0,76,736	1/1:1,4:5:12.03:133,12,0	0/1:12,0:10:1.17:1,0,49	0/0:13,0:13:20.24:0,20,201	1/1:2,19:21:27.71:503,28,0	1/1:3,23:26:34.11:605,34,0	1/1:1,10:11:30.08:332,30,0	0/0:31,0:31:74.90:0,75,643	0/0:11,0:11:26.99:0,27,234	1/1:3,15:18:45.10:487,45,0	1/1:3,3:6:9.02:100,9,0	1/1:0,9:9:24.06:266,24,0	1/1:1,10:11:7.03:306,7,0	1/1:2,11:13:24.02:252,24,0	1/1:3,9:12:27.07:299,27,0	1/1:1,9:10:21.06:232,21,0	1/1:3,36:38:86.98:962,87,0	1/1:2,19:21:51.14:564,51,0	0/0:16,0:16:35.01:0,35,289	0/0:16,0:16:38.94:0,39,329	0/0:12,0:12:29.99:0,30,260	1/1:1,3:4:6.01:66,6,0	1/1:0,9:9:24.06:265,24,0	./.	1/1:0,7:7:18.05:199,18,0	1/1:3,21:24:60.16:664,60,0	1/1:2,14:16:16.06:405,16,0	1/1:4,20:24:57.15:630,57,0
chr10	18459394	.	CA	C	67.45	PASS	AB=0.884;AC=14;AF=0.259;AN=54;BaseQRankSum=-3.099;DP=350;FS=0.815;HRun=17;HaplotypeScore=94.1195;InbreedingCoeff=0.3272;MQ=33.89;MQ0=27;MQRankSum=-0.772;QD=0.62;ReadPosRankSum=2.774;VQSLOD=-0.7452;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:21:21.39:0,21,161	0/0:7,0:5:2.94:0,3,19	0/0:3,0:2:3.68:0,4,15	./.	0/0:20,0:22:9.14:0,9,90	0/0:19,0:17:3.92:0,4,64	0/0:9,0:7:3.27:0,3,15	1/1:19,0:18:9.67:30,10,0	0/1:13,6:19:29.77:30,0,54	0/0:25,0:25:21.18:0,21,106	0/0:14,0:14:16.01:0,16,86	0/0:5,0:4:2.60:0,3,10	0/0:4,0:4:0.47:0,0,1	0/0:6,0:6:4.52:0,5,24	0/1:7,1:7:7.57:8,0,23	0/1:7,1:7:2.42:23,0,2	0/0:16,0:13:2.60:0,3,37	1/1:4,1:5:1.38:13,1,0	1/1:9,2:10:7.11:34,7,0	1/1:16,0:15:10.75:31,11,0	1/1:6,0:6:7.55:37,8,0	0/0:11,0:10:5.87:0,6,23	0/0:7,0:9:3.72:0,4,27	0/0:4,0:5:0.88:0,1,2	0/1:16,0:17:7.16:7,0,56	0/0:9,0:10:7.43:0,7,44	0/0:23,0:22:13.51:0,14,53	0/0:15,0:8:3.65:0,4,20
chr10	18459405	.	AAAAAAAG	A	1213.11	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=-5.742;DP=382;FS=5.136;HRun=0;HaplotypeScore=121.7282;InbreedingCoeff=0.5383;MQ=37.61;MQ0=30;MQRankSum=-0.797;QD=11.89;ReadPosRankSum=-0.686;VQSLOD=2.2923;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:21:49.85:50,0,390	0/0:7,0:5:8.86:0,9,131	0/1:13,0:3:3.51:4,0,48	0/0:10,0:5:7.71:0,8,42	0/0:26,0:23:50.96:0,51,778	0/0:9,0:18:23.75:0,24,460	0/0:6,0:6:0.83:0,1,73	1/1:6,12:18:31.89:450,32,0	0/0:16,0:16:18.34:0,18,448	0/0:24,0:24:49.68:0,50,553	0/0:15,0:14:20.97:0,21,456	0/0:2,0:1:3.01:0,3,65	0/0:5,0:5:11.62:0,12,151	0/0:3,0:3:9:0,9,130	0/0:9,0:9:20.09:0,20,382	0/0:11,0:11:7.10:0,7,255	0/0:16,0:12:31.15:0,31,424	0/1:4,0:4:10.11:10,0,29	1/1:14,2:15:23.81:261,24,0	1/1:5,9:14:26.44:417,26,0	1/1:4,3:7:11.89:184,12,0	0/0:9,0:8:14.03:0,14,317	0/0:12,0:12:24.05:0,24,280	0/0:4,0:4:4.20:0,4,22	0/0:12,0:24:24.30:0,24,495	0/0:4,0:16:36.02:0,36,474	0/0:25,0:24:61.29:0,61,932	0/0:16,0:12:16.44:0,16,104
chr10	18459408	.	AAAAG	A	1197.04	PASS	AB=0.963;AC=19;AF=0.339;AN=56;BaseQRankSum=-5.521;DP=382;FS=4.865;HRun=0;HaplotypeScore=108.8732;InbreedingCoeff=0.1282;MQ=40.55;MQ0=25;MQRankSum=-3.213;QD=5.03;ReadPosRankSum=-1.472;VQSLOD=1.7522;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:20:14.39:14,0,196	0/0:6,0:4:7.41:0,7,74	0/1:15,0:3:4.26:4,0,43	0/1:13,0:6:1.21:1,0,52	0/1:24,2:23:99:106,0,301	0/0:20,0:19:22.03:0,22,231	0/0:7,0:5:5.90:0,6,60	1/1:17,0:17:32.54:266,33,0	0/0:16,0:16:32.41:0,32,361	0/1:23,1:24:99:111,0,199	0/1:16,1:16:54.78:55,0,226	0/0:3,0:2:4.83:0,5,42	0/0:6,0:6:13.81:0,14,86	0/0:4,0:4:8.59:0,9,69	0/0:10,0:10:22.46:0,22,222	0/0:12,0:11:22.06:0,22,159	0/1:14,2:12:66.57:67,0,160	0/0:4,0:4:5.38:0,5,29	1/1:16,0:15:18.63:181,19,0	1/1:14,0:14:26.53:250,27,0	1/1:7,0:7:11.90:100,12,0	0/0:8,0:7:14.54:0,15,178	0/1:12,1:13:50.06:50,0,88	0/1:5,0:5:3.76:44,0,4	0/0:23,0:23:21.64:0,22,251	0/1:15,1:16:94.94:95,0,125	0/0:25,0:24:36.18:0,36,395	0/1:12,0:11:26.19:28,0,26
chr10	18459410	.	AAG	A	1181.02	PASS	AB=0.958;AC=21;AF=0.375;AN=56;BaseQRankSum=-5.960;DP=369;FS=9.398;HRun=0;HaplotypeScore=98.0926;InbreedingCoeff=-0.0304;MQ=41.33;MQ0=20;MQRankSum=-2.627;QD=4.34;ReadPosRankSum=-2.382;VQSLOD=1.5196;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:25,1:20:27.59:28,0,100	0/0:5,1:4:7.41:0,7,56	0/1:15,0:3:2.04:2,0,25	0/0:15,0:6:6.64:0,7,44	0/1:26,0:23:99:100,0,137	0/0:19,0:18:2.58:0,3,67	0/0:6,0:4:4.46:0,4,20	1/1:13,0:13:32.11:194,32,0	0/0:15,0:15:20:0,20,241	0/1:22,1:23:71.42:181,0,71	0/1:17,0:16:53.43:53,0,102	0/0:3,0:2:4.66:0,5,19	0/0:5,1:6:13.49:0,13,59	0/0:4,0:4:11.08:0,11,59	0/0:11,0:11:23.27:0,23,117	0/1:12,0:12:16.07:16,0,38	0/1:13,1:12:62.27:101,0,62	0/0:4,0:4:5.43:0,5,29	1/1:15,0:14:26.86:198,27,0	1/1:12,0:12:26.34:170,26,0	1/1:7,0:7:11.21:60,11,0	0/0:8,0:7:10.15:0,10,91	0/1:11,1:12:19.97:60,0,20	0/1:3,2:5:3.96:25,0,4	0/1:23,0:23:31.91:32,0,65	0/1:17,0:17:55.37:68,0,55	0/1:23,1:23:44.41:44,0,150	0/1:11,0:11:8.90:22,0,9
chr10	18459411	.	AG	A	1285.97	PASS	AB=0.964;AC=25;AF=0.446;AN=56;BaseQRankSum=-5.821;DP=368;FS=0.000;HRun=1;HaplotypeScore=94.1407;InbreedingCoeff=-0.0787;MQ=41.84;MQ0=20;MQRankSum=-4.658;QD=4.50;ReadPosRankSum=-1.114;VQSLOD=-0.2605;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:20:27.60:53,0,28	0/0:6,0:4:7.42:0,7,46	0/0:16,0:4:0.45:0,0,47	0/0:16,0:6:1.81:0,2,27	0/1:23,2:22:56.73:112,0,57	0/1:17,2:18:16.78:24,0,17	1/1:7,0:5:2.25:9,2,0	1/1:13,0:13:31.72:172,32,0	0/0:14,1:15:0.16:0,0,173	0/1:19,2:21:29.29:141,0,29	0/1:15,1:15:56.97:68,0,57	0/0:4,0:3:5.19:0,5,14	0/0:6,0:6:13.35:0,13,55	0/0:4,0:4:8.72:0,9,53	0/0:11,0:11:16.77:0,17,73	0/1:11,1:12:5.80:53,0,6	0/1:12,1:11:39.43:77,0,39	0/0:4,0:4:3.76:0,4,13	1/1:15,0:14:33.92:198,34,0	1/1:12,0:12:25.53:130,26,0	1/1:8,0:8:12.65:65,13,0	0/1:8,0:7:15.02:15,0,49	0/1:12,0:12:6.68:70,0,7	0/1:5,0:5:3.86:28,0,4	1/1:22,2:24:0.28:87,0,0	0/1:18,0:18:22.03:76,0,22	0/1:24,0:23:53.97:54,0,111	0/1:8,0:8:4.72:17,0,5
chr10	18459412	.	G	GA	3975.64	PASS	AB=0.887;AC=48;AF=0.857;AN=56;BaseQRankSum=1.755;DP=373;FS=7.139;HRun=17;HaplotypeScore=88.0790;InbreedingCoeff=0.5065;MQ=44.67;MQ0=20;MQRankSum=-2.468;QD=12.31;ReadPosRankSum=1.585;VQSLOD=2.4634;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,11:20:50.52:479,51,0	0/1:5,1:4:10.63:16,0,11	0/0:18,0:6:7.41:0,7,48	0/0:17,0:7:4.67:0,5,61	1/1:18,7:22:39.17:291,39,0	1/1:19,0:18:16.34:116,16,0	1/1:7,0:5:6.35:30,6,0	1/1:12,1:13:32.84:329,33,0	0/0:15,0:15:29.90:0,30,299	1/1:16,5:21:12.96:224,13,0	1/1:13,3:15:29.26:226,29,0	1/1:3,1:3:8.87:56,9,0	1/1:6,0:6:9.40:25,9,0	1/1:3,1:4:4.05:42,4,0	0/1:10,1:11:14.49:71,0,14	1/1:9,3:12:21.33:137,21,0	1/1:11,2:11:19.09:103,19,0	1/1:4,0:4:2.98:21,3,0	1/1:11,5:15:34.39:339,34,0	1/1:10,2:12:26.17:189,26,0	1/1:8,0:8:13.20:84,13,0	1/1:8,0:7:12.14:71,12,0	1/1:10,2:12:25.68:191,26,0	1/1:4,1:5:3.37:9,3,0	1/1:21,3:24:33.75:250,34,0	1/1:16,3:19:38.06:299,38,0	1/1:19,5:23:38.45:246,38,0	1/1:8,0:8:18.71:130,19,0
chr10	18459419	.	A	AAAAAAG	5989.30	PASS	AB=0.962;AC=42;AF=0.750;AN=56;BaseQRankSum=-0.610;DP=385;FS=11.844;HRun=0;HaplotypeScore=119.4045;InbreedingCoeff=0.7460;MQ=45.47;MQ0=16;MQRankSum=-1.145;QD=20.03;ReadPosRankSum=1.177;VQSLOD=3.5127;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:23,2:20:23.93:358,24,0	1/1:7,0:5:5.64:84,6,0	0/1:19,0:6:1.36:1,0,101	0/0:18,0:7:7.93:0,8,86	1/1:25,2:25:35.93:581,36,0	1/1:18,0:17:21.07:495,21,0	1/1:7,0:6:9.03:129,9,0	0/0:17,0:17:35.18:0,35,357	0/0:13,0:13:20.87:0,21,439	1/1:22,0:22:22.79:210,23,0	1/1:13,1:13:21.01:313,21,0	1/1:3,1:3:9.03:192,9,0	1/1:9,0:9:20.94:187,21,0	1/1:4,0:4:9.03:133,9,0	0/1:11,1:12:36.33:356,0,36	1/1:11,0:11:12.04:212,12,0	1/1:12,0:11:19.43:179,19,0	1/1:4,0:4:8.98:133,9,0	0/0:15,0:14:17.65:0,18,198	0/0:12,0:12:27.05:0,27,354	0/0:11,0:11:16.73:0,17,160	1/1:7,0:6:11.92:96,12,0	1/1:14,0:14:24.01:257,24,0	1/1:6,0:6:6.01:68,6,0	1/1:23,2:25:30.09:629,30,0	1/1:20,0:20:40.63:571,41,0	1/1:24,0:24:43.14:607,43,0	1/1:8,0:8:15.02:197,15,0
chr10	18459694	.	A	AT	13125.75	PASS	AB=1.000;AC=34;AF=0.607;AN=56;BaseQRankSum=-18.568;DP=677;FS=1.299;HRun=4;HaplotypeScore=104.7806;InbreedingCoeff=0.8440;MQ=81.21;MQ0=0;MQRankSum=-3.491;QD=32.17;ReadPosRankSum=0.660;VQSLOD=4.6183;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:69:99:0,104,334	1/1:2,11:13:36.12:492,36,0	0/0:27,0:27:47.92:0,48,648	0/0:24,0:24:46.48:0,46,506	1/1:2,30:32:75.12:958,75,0	0/1:1,0:19:8.24:8,0,53	0/0:0,0:16:30.34:0,30,89	1/1:5,36:41:99:1451,108,0	0/0:23,0:23:66.17:0,66,738	1/1:0,23:23:69.21:922,69,0	1/1:0,6:6:15.05:205,15,0	0/1:2,0:20:7.67:8,0,49	1/1:1,21:22:51.17:697,51,0	1/1:2,20:22:60.20:810,60,0	0/0:0,0:24:48.89:0,49,143	0/0:1,0:27:3.38:0,3,112	1/1:0,31:32:93.31:1264,93,0	0/0:1,0:18:31.58:0,32,92	1/1:3,22:25:69.22:927,69,0	1/1:1,22:23:66.18:882,66,0	1/1:1,16:17:45.15:616,45,0	0/0:0,0:15:30.56:0,31,90	1/1:1,20:21:54.14:716,54,0	1/1:1,26:27:75.25:1026,75,0	0/0:2,0:26:19.59:0,20,96	1/1:5,19:24:54.18:732,54,0	1/1:0,29:29:69.19:920,69,0	1/1:0,12:12:36.12:492,36,0
chr10	18460651	.	C	CT	6958.11	PASS	AB=0.736;AC=26;AF=0.464;AN=56;BaseQRankSum=-11.596;DP=672;FS=0.000;HRun=10;HaplotypeScore=65.9666;InbreedingCoeff=0.6991;MQ=75.39;MQ0=0;MQRankSum=0.236;QD=19.77;ReadPosRankSum=-2.098;VQSLOD=4.8330;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,32:39:73.24:934,73,0	0/1:8,1:9:5.02:5,0,170	0/1:11,1:12:22.18:22,0,56	0/0:15,0:16:25.60:0,26,175	0/0:34,1:36:59.88:0,60,682	0/1:5,21:27:14.02:442,0,14	0/1:7,22:29:7.74:542,0,8	1/1:4,28:32:81.14:831,81,0	0/0:30,0:30:71.90:0,72,591	0/0:28,0:29:73.91:0,74,596	0/0:31,0:32:85.93:0,86,695	1/1:1,14:15:29.91:320,30,0	0/0:25,0:25:68.85:0,69,555	0/0:24,0:24:62.90:0,63,514	1/1:3,26:30:41.31:617,41,0	1/1:4,22:27:19.69:591,20,0	0/0:23,0:23:47.91:0,48,388	1/1:3,16:19:23.48:455,23,0	1/1:6,13:19:14.43:351,14,0	1/1:3,21:24:51.05:519,51,0	1/1:7,20:28:7.68:471,8,0	1/1:6,15:21:1.84:429,2,0	0/0:22,0:23:52.94:0,53,425	0/0:20,0:20:47.93:0,48,394	1/1:3,17:21:41.94:430,42,0	0/0:24,0:25:61.96:0,62,499	0/0:25,0:25:65.90:0,66,541	0/0:12,0:12:20.95:0,21,172
chr10	18460941	.	GCCCCT	G	220.48	PASS	AB=0.500;AC=15;AF=0.625;AN=24;BaseQRankSum=2.658;DP=73;FS=26.734;HRun=0;HaplotypeScore=36.2660;InbreedingCoeff=0.5370;MQ=94.05;MQ0=6;MQRankSum=-0.554;QD=11.60;ReadPosRankSum=-4.153;VQSLOD=-0.4018;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:13,0:10:30.10:0,30,928	0/0:22,0:13:39.13:0,39,1147	1/1:0,4:4:2.97:20,3,0	1/1:2,0:2:6.02:76,6,0	./.	./.	0/0:13,0:13:39.13:0,39,1235	1/1:1,0:1:3.01:45,3,0	./.	1/1:1,0:1:3:29,3,0	./.	./.	./.	./.	./.	./.	./.	1/1:1,4:5:6.02:86,6,0	./.	0/0:2,0:2:3.01:0,3,62	0/1:0,4:4:0.24:0,0,0	./.	1/1:1,0:1:3:28,3,0	1/1:1,0:1:3.01:43,3,0	./.	./.
chr10	18461215	.	AGAGAGAGACC	A	2267.86	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=3.921;DP=652;FS=26.919;HRun=0;HaplotypeScore=173.3274;InbreedingCoeff=-0.0093;MQ=60.16;MQ0=7;MQRankSum=2.326;QD=12.67;ReadPosRankSum=2.851;VQSLOD=1.2243;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:89.89:0,90,2110	0/0:10,0:10:3.01:0,3,43	0/0:24,0:14:34.24:0,34,467	0/0:27,0:12:29.45:0,29,428	0/0:22,0:22:2.71:0,3,43	0/0:31,0:31:63.19:0,63,1017	0/0:27,0:27:60.18:0,60,1150	0/1:19,0:18:26.21:468,0,26	0/0:32,0:32:72.19:0,72,1470	0/1:24,0:23:34.17:599,0,34	0/1:24,0:24:20.57:21,0,183	0/0:19,0:19:34.60:0,35,718	0/1:19,0:19:26.15:26,0,61	0/0:22,0:22:8.49:0,8,104	0/0:28,0:28:18.06:0,18,457	0/0:21,0:21:12.30:0,12,226	0/0:23,0:23:10.80:0,11,159	0/0:16,0:15:39.05:0,39,665	0/1:15,0:15:85.27:379,0,85	0/1:26,0:26:88.82:89,0,155	0/0:37,0:36:24.05:0,24,432	0/0:26,0:26:41.24:0,41,770	0/0:7,9:16:3.01:0,3,43	0/0:29,0:28:3.45:0,3,23	0/0:17,0:17:6.02:0,6,179	1/1:6,19:25:41.62:789,42,0	0/1:27,0:27:39.43:39,0,117	0/0:11,0:11:15.47:0,15,213
chr10	18461217	.	AGAGAGACC	A	2656.78	PASS	AB=0.935;AC=15;AF=0.278;AN=54;BaseQRankSum=2.274;DP=649;FS=9.359;HRun=0;HaplotypeScore=160.6229;InbreedingCoeff=0.4143;MQ=62.90;MQ0=6;MQRankSum=1.160;QD=11.35;ReadPosRankSum=2.725;VQSLOD=2.0972;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:89.88:0,90,1693	0/1:10,0:10:0:0,0,0	0/0:26,0:16:40.05:0,40,585	0/0:29,0:14:35.72:0,36,503	0/1:22,0:22:0:0,0,0	0/0:30,0:30:60.19:0,60,887	0/0:27,0:27:60.20:0,60,990	1/1:20,0:20:22.22:623,22,0	0/0:30,0:30:69.16:0,69,1221	1/1:23,0:22:47.99:688,48,0	0/1:24,0:24:29.61:30,0,37	0/0:17,0:17:34.61:0,35,614	0/1:19,0:19:13.82:62,0,14	0/0:22,0:22:2.38:0,2,19	0/0:7,0:28:18.02:0,18,293	0/0:22,0:22:8.46:0,8,117	0/1:22,0:22:33.67:40,0,34	0/0:17,0:16:42.02:0,42,566	1/1:16,0:16:8.43:450,8,0	0/1:7,19:26:11.92:98,0,12	0/0:36,0:35:14.98:0,15,181	0/0:26,0:26:41.68:0,42,680	./.	0/0:6,21:26:0.47:0,0,1	0/0:1,0:17:6.02:0,6,130	1/1:24,0:24:46.09:711,46,0	0/1:27,1:28:8.41:118,0,8	0/0:14,0:14:6.49:0,6,81
chr10	18461219	.	AGAGACC	A	2992.02	PASS	AB=1.000;AC=21;AF=0.438;AN=48;BaseQRankSum=1.309;DP=635;FS=1.781;HRun=0;HaplotypeScore=142.7661;InbreedingCoeff=0.7861;MQ=65.57;MQ0=6;MQRankSum=0.657;QD=12.47;ReadPosRankSum=1.900;VQSLOD=2.5662;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:87.14:0,87,1356	./.	0/0:27,0:17:42.81:0,43,632	0/0:31,0:16:41.49:0,41,587	0/1:21,0:21:0:0,0,0	0/0:28,0:28:54.12:0,54,752	0/0:26,0:26:51.09:0,51,771	1/1:21,0:21:48.16:737,48,0	0/0:31,0:31:71.72:0,72,1190	1/1:22,0:21:48.16:688,48,0	1/1:21,0:21:3.01:36,3,0	0/0:17,0:17:31.55:0,32,527	1/1:19,0:19:6.02:72,6,0	1/1:23,0:23:2.57:16,3,0	0/0:28,0:28:11.92:0,12,139	0/0:21,0:21:3.16:0,3,61	1/1:6,17:23:6.02:137,6,0	0/0:16,0:15:35.89:0,36,421	1/1:16,0:16:39.11:564,39,0	1/1:26,0:26:8.97:110,9,0	./.	0/0:25,0:25:41.56:0,42,593	./.	0/0:26,0:25:0:0,0,0	0/0:16,0:16:5.98:0,6,82	1/1:23,0:23:48.15:687,48,0	1/1:25,0:25:11.72:123,12,0	./.
chr10	18461221	.	A	AGAGAGGGAGG	4563.30	PASS	AB=1.000;AC=17;AF=0.315;AN=54;BaseQRankSum=-6.048;DP=617;FS=8.935;HRun=0;HaplotypeScore=183.4821;InbreedingCoeff=0.6780;MQ=67.66;MQ0=6;MQRankSum=-3.024;QD=21.63;ReadPosRankSum=-2.708;VQSLOD=2.7427;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:34,0:34:99:231,0,833	0/0:6,0:6:2.68:0,3,11	0/0:28,0:18:10.03:0,10,555	0/0:32,0:17:39.52:0,40,605	0/0:21,0:21:0.47:0,0,1	1/1:26,0:26:70.08:1021,70,0	1/1:27,0:27:62.80:1009,63,0	0/0:21,0:21:46.37:0,46,668	0/0:32,0:32:67.32:0,67,1211	0/0:21,0:20:48.11:0,48,716	0/0:22,0:22:6:0,6,60	1/1:16,0:16:39.05:566,39,0	0/0:19,0:19:8.24:0,8,85	0/0:21,0:21:3.01:0,3,36	1/1:29,0:29:16.93:228,17,0	1/1:5,16:23:6.29:192,6,0	0/0:21,0:21:6.02:0,6,143	1/1:16,0:15:39:562,39,0	0/0:2,0:15:39.12:0,39,580	0/0:23,0:23:9.91:0,10,115	0/0:32,0:31:5.98:0,6,48	1/1:24,0:24:41.87:609,42,0	./.	0/0:23,0:22:2.81:0,3,14	1/1:16,0:16:6.02:145,6,0	0/0:23,0:23:52.77:0,53,741	0/0:24,0:24:12.08:0,12,141	0/0:12,0:12:2.93:0,3,21
chr10	18462025	.	TAA	T	658.26	PASS	AB=0.680;AC=15;AF=0.268;AN=56;BaseQRankSum=3.865;DP=558;FS=3.644;HRun=18;HaplotypeScore=108.9565;InbreedingCoeff=0.8187;MQ=65.73;MQ0=4;MQRankSum=-2.356;QD=5.72;ReadPosRankSum=4.921;VQSLOD=-0.1347;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:16:33.02:0,33,329	0/0:12,0:12:24:0,24,244	0/0:47,0:19:14.40:0,14,136	0/0:34,2:20:20.43:0,20,175	0/0:38,0:38:64.17:0,64,632	1/1:9,5:15:14.32:111,14,0	1/1:7,5:15:19.68:124,20,0	0/0:34,0:33:66.12:0,66,723	0/0:10,0:11:26.49:0,26,250	0/0:33,0:33:69.90:0,70,685	0/0:21,0:21:33.09:0,33,370	1/1:3,1:5:5.68:34,6,0	0/0:9,0:9:18:0,18,186	0/0:12,0:12:22.81:0,23,213	1/1:4,3:9:14.18:90,14,0	1/1:5,7:13:1.33:123,1,0	0/0:22,0:22:27.33:0,27,244	1/1:4,6:12:19.73:134,20,0	0/0:17,0:17:24.04:0,24,250	0/0:30,0:30:55.67:0,56,555	0/0:13,0:13:15.04:0,15,126	1/1:3,9:12:14.28:111,14,0	0/0:21,0:19:21.89:0,22,216	0/0:14,0:14:12.03:0,12,128	0/1:18,11:34:65.74:115,0,66	0/0:18,0:18:45.04:0,45,462	0/0:19,0:19:49.30:0,49,509	0/0:14,0:16:39.05:0,39,422
chr10	18462594	.	GGTGT	G	3632.56	PASS	AB=0.929;AC=36;AF=0.692;AN=52;BaseQRankSum=2.833;DP=522;FS=1.777;HRun=0;HaplotypeScore=119.5246;InbreedingCoeff=0.6416;MQ=62.50;MQ0=16;MQRankSum=-2.314;QD=10.56;ReadPosRankSum=3.836;VQSLOD=2.7953;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:31:15.05:0,15,252	1/1:6,5:13:12.01:168,12,0	./.	0/0:21,0:13:0.89:0,1,2	1/1:16,8:25:15.04:215,15,0	1/1:10,0:9:12.48:112,12,0	0/1:16,0:16:0:0,0,0	0/0:23,0:22:3.01:0,3,51	0/0:12,0:15:14.79:0,15,248	1/1:19,6:25:2.86:172,3,0	./.	1/1:26,0:25:36.51:332,37,0	1/1:9,5:18:27.06:377,27,0	1/1:6,3:13:6.22:184,6,0	1/1:16,0:16:18.02:168,18,0	1/1:10,0:10:12.01:112,12,0	1/1:12,10:22:9.56:419,10,0	1/1:13,0:13:12.84:136,13,0	0/0:12,0:10:9.03:0,9,137	0/0:11,0:15:3.01:0,3,52	0/0:22,0:22:17.84:0,18,270	1/1:14,0:13:9.01:83,9,0	1/1:11,6:17:6.02:85,6,0	1/1:16,16:30:27.09:420,27,0	1/1:19,0:19:12.01:111,12,0	0/1:20,3:22:40.24:136,0,40	1/1:7,8:17:17.87:261,18,0	1/1:8,5:13:9.03:140,9,0
chr10	18462597	.	GTGTGT	G	1024.22	PASS	AB=0.769;AC=8;AF=0.143;AN=56;BaseQRankSum=9.893;DP=525;FS=9.328;HRun=0;HaplotypeScore=134.8026;InbreedingCoeff=-0.1699;MQ=58.97;MQ0=17;MQRankSum=-9.330;QD=8.06;ReadPosRankSum=1.768;VQSLOD=2.0770;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:45.15:0,45,838	0/0:13,0:13:3.49:0,3,258	0/0:22,0:14:42.13:0,42,527	0/0:20,0:12:36.08:0,36,427	0/0:24,0:24:16.23:0,16,439	0/1:7,2:9:10.65:120,0,11	0/0:15,0:18:28.92:0,29,170	0/0:23,0:22:61.87:0,62,813	0/0:16,0:16:39.13:0,39,708	0/0:24,0:22:55.33:0,55,611	0/0:12,0:12:21.07:0,21,275	0/1:12,12:25:50.14:393,0,50	0/0:18,0:18:5.36:0,5,238	0/1:13,0:13:24.57:25,0,122	0/1:10,6:19:41.25:179,0,41	0/1:6,4:10:53.26:129,0,53	0/0:23,0:23:21.43:0,21,305	0/1:8,5:14:99:154,0,122	0/0:11,0:9:21.07:0,21,411	0/0:14,0:14:21.05:0,21,295	0/0:26,0:23:48.63:0,49,866	0/1:12,0:13:53.99:54,0,80	0/0:16,0:16:30.15:0,30,352	0/0:31,0:29:28.32:0,28,332	0/1:15,4:19:99:106,0,125	0/0:24,0:22:33.50:0,34,710	0/0:18,0:18:3.72:0,4,218	0/0:13,0:13:19.45:0,19,217
chr10	18463264	.	GCTT	G	2171.88	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=11.091;DP=468;FS=60.781;HRun=0;HaplotypeScore=100.7466;InbreedingCoeff=0.9804;MQ=97.21;MQ0=0;MQRankSum=-10.515;QD=36.81;ReadPosRankSum=1.232;VQSLOD=1.8291;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,120,2901	0/0:11,0:11:33.11:0,33,817	0/0:23,0:23:69.24:0,69,1618	0/0:25,0:26:75.22:0,75,1613	0/0:20,0:20:60.21:0,60,1457	1/1:0,6:6:15.05:256,15,0	1/1:0,8:8:24.05:346,24,0	0/0:31,0:31:93.31:0,93,2201	0/0:23,0:23:69.21:0,69,1613	0/0:14,0:14:42.14:0,42,951	0/0:19,0:19:57.17:0,57,1349	1/1:1,7:8:18.03:252,18,0	0/0:22,0:22:63.22:0,63,1553	0/0:14,0:14:42.14:0,42,1036	1/1:0,8:8:21.07:356,21,0	1/1:2,1:3:9.01:124,9,0	0/0:27,0:27:81.28:0,81,1997	1/1:0,5:5:15.03:234,15,0	0/0:18,0:18:54.19:0,54,1331	0/0:15,0:15:42.14:0,42,1036	0/0:31,0:31:93.32:0,93,2195	1/1:0,11:11:24.05:353,24,0	0/0:11,0:11:33.11:0,33,813	0/0:20,0:20:60.19:0,60,1424	1/1:0,10:10:27.09:455,27,0	0/0:21,0:21:63.22:0,63,1553	0/0:17,0:17:51.18:0,51,1252	0/0:6,0:6:18.06:0,18,439
chr10	18463269	.	ATGTGCACCAAGT	A	5302.97	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=12.039;DP=461;FS=67.520;HRun=0;HaplotypeScore=177.4291;InbreedingCoeff=0.9620;MQ=97.69;MQ0=0;MQRankSum=-12.060;QD=94.70;ReadPosRankSum=0.728;VQSLOD=2.4313;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,120,7410	0/0:11,0:11:33.11:0,33,1892	0/0:23,0:23:69.24:0,69,3576	0/0:26,0:26:72.25:0,72,3268	0/0:20,0:20:60.21:0,60,3583	1/1:0,6:6:18.06:615,18,0	1/1:0,8:8:24.07:734,24,0	0/0:29,0:29:87.30:0,87,4813	0/0:22,0:22:63.20:0,63,3840	0/0:10,0:10:30.10:0,30,1546	0/0:19,0:19:54.19:0,54,3380	1/1:0,7:7:21.07:575,21,0	0/0:22,0:22:66.23:0,66,4014	0/0:14,0:14:42.13:0,42,2454	1/1:0,8:8:24.08:841,24,0	1/1:0,1:1:3.01:115,3,0	0/0:28,0:28:84.29:0,84,4936	1/1:0,5:5:15.05:491,15,0	0/0:20,0:20:60.21:0,60,3196	0/0:15,0:15:42.14:0,42,2645	0/0:32,0:32:93.32:0,93,5623	1/1:0,11:11:33.10:867,33,0	0/0:11,0:11:33.11:0,33,1830	0/0:19,0:19:57.20:0,57,3466	1/1:0,10:10:30.10:1065,30,0	0/0:22,0:22:66.23:0,66,4064	0/0:17,0:17:51.16:0,51,2995	0/0:5,0:5:15.05:0,15,954
chr10	18463459	.	TA	T	1507.79	PASS	AB=0.533;AC=15;AF=0.268;AN=56;BaseQRankSum=11.678;DP=355;FS=17.917;HRun=3;HaplotypeScore=62.0698;InbreedingCoeff=0.8754;MQ=98.09;MQ0=1;MQRankSum=-5.428;QD=26.92;ReadPosRankSum=-2.231;VQSLOD=1.5691;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:48.13:0,48,650	0/0:11,0:11:33.11:0,33,475	0/0:21,0:21:48.36:0,48,764	0/0:18,0:17:47.67:0,48,671	0/0:14,0:14:42.13:0,42,581	1/1:0,5:5:12.03:130,12,0	1/1:0,8:8:24.07:266,24,0	0/0:16,0:15:48.15:0,48,676	0/0:10,0:10:30.10:0,30,432	0/0:14,0:14:42.13:0,42,573	0/0:15,0:15:45.15:0,45,647	1/1:0,2:2:6.02:66,6,0	0/0:19,0:19:57.15:0,57,797	0/0:17,0:17:51.17:0,51,732	1/1:0,5:5:15.04:166,15,0	0/1:1,7:8:18.84:208,0,19	0/0:15,0:15:45.13:0,45,625	1/1:0,6:6:18.05:196,18,0	0/0:14,0:14:39.13:0,39,555	0/0:14,0:14:42.14:0,42,605	0/0:25,0:25:75.23:0,75,1058	1/1:1,15:16:43:467,43,0	0/0:10,0:10:30.10:0,30,431	0/0:20,0:20:57.19:0,57,816	1/1:0,6:6:18.05:202,18,0	0/0:17,0:17:51.17:0,51,733	0/0:7,0:7:21.07:0,21,301	0/0:6,0:6:15.05:0,15,216
chr10	18464085	.	TATATCAC	T	6798.68	PASS	AB=0.533;AC=15;AF=0.268;AN=56;BaseQRankSum=14.668;DP=532;FS=3.131;HRun=0;HaplotypeScore=146.5885;InbreedingCoeff=0.9064;MQ=84.74;MQ0=0;MQRankSum=-14.444;QD=64.75;ReadPosRankSum=3.893;VQSLOD=4.8708;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,120,4826	0/0:9,0:9:27.09:0,27,1106	0/0:25,0:25:57.97:0,58,1961	0/0:14,0:14:39.12:0,39,1320	0/0:20,0:20:60.21:0,60,2287	1/1:1,13:14:39.13:992,39,0	1/1:2,8:10:21.07:539,21,0	0/0:35,0:35:99:0,102,3897	0/0:17,0:17:51.18:0,51,2090	0/0:27,0:27:81.27:0,81,3107	0/0:24,0:24:72.25:0,72,2868	1/1:0,16:16:48.16:1217,48,0	0/0:20,0:20:60.19:0,60,2257	0/0:12,0:12:36.12:0,36,1275	1/1:3,18:21:54.19:1375,54,0	1/1:0,17:17:42.14:1071,42,0	0/0:26,0:26:75.26:0,75,2944	0/1:1,7:8:99:410,0,102	0/0:20,0:20:60.21:0,60,2249	0/0:22,0:22:66.21:0,66,2500	0/0:15,0:15:42.14:0,42,1625	1/1:0,8:8:18.06:445,18,0	0/0:21,0:21:60.19:0,60,2245	0/0:20,0:20:60.18:0,60,2258	1/1:0,11:11:30.10:750,30,0	0/0:26,0:26:78.27:0,78,3085	0/0:21,0:21:63.17:0,63,2473	0/0:13,0:13:39.13:0,39,1441
chr10	18464868	.	T	TG	7434.53	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-15.217;DP=628;FS=0.000;HRun=3;HaplotypeScore=68.1660;InbreedingCoeff=0.9996;MQ=88.13;MQ0=0;MQRankSum=-3.520;QD=38.52;ReadPosRankSum=2.670;VQSLOD=5.0671;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:39.12:0,39,468	0/0:13,0:13:39.12:0,39,468	0/0:27,0:27:81.21:0,81,935	0/0:17,0:17:42.12:0,42,489	0/0:31,0:31:90.26:0,90,1068	1/1:1,34:35:93.31:1302,93,0	1/1:1,19:20:54.18:756,54,0	0/0:27,0:27:72.22:0,72,864	0/0:24,0:24:72.22:0,72,864	0/0:28,0:28:78.24:0,78,933	0/0:24,0:24:69.21:0,69,828	1/1:1,24:25:72.24:1008,72,0	0/0:18,0:18:54.17:0,54,648	0/0:21,0:21:63.19:0,63,756	1/1:0,24:24:63.21:882,63,0	1/1:0,18:18:51.17:714,51,0	0/0:22,0:22:66.20:0,66,792	1/1:0,18:18:51.17:714,51,0	0/0:19,0:19:57.16:0,57,670	0/0:23,0:23:63.15:0,63,729	0/0:16,0:16:48.13:0,48,563	1/1:0,31:31:87.29:1217,87,0	0/0:22,0:22:63.18:0,63,745	0/0:21,0:21:60.18:0,60,717	1/1:2,20:22:60.20:840,60,0	0/0:24,0:24:66.20:0,66,792	0/0:36,0:36:93.28:0,93,1114	0/0:9,0:9:24.07:0,24,287
chr10	18465053	.	CATCT	C	8280.11	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=17.259;DP=700;FS=0.700;HRun=0;HaplotypeScore=129.2259;InbreedingCoeff=0.9986;MQ=88.69;MQ0=0;MQRankSum=-5.744;QD=46.52;ReadPosRankSum=3.739;VQSLOD=5.2687;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,141,3608	0/0:7,0:7:18.06:0,18,480	0/0:24,0:24:63.22:0,63,1502	0/0:30,0:30:83.13:0,83,1909	0/0:19,0:19:54.19:0,54,1439	1/1:1,25:26:69.24:1287,69,0	1/1:1,20:21:48.16:895,48,0	0/0:28,0:28:69.23:0,69,1684	0/0:22,0:22:60.17:0,60,1488	0/0:29,0:29:78.27:0,78,2082	0/0:18,0:18:51.16:0,51,1242	1/1:2,19:21:54.19:1007,54,0	0/0:21,0:21:63.20:0,63,1617	0/0:21,0:21:63.20:0,63,1589	1/1:1,30:31:78.27:1455,78,0	1/1:0,25:25:66.23:1231,66,0	0/0:26,0:26:75.26:0,75,1920	1/1:0,16:16:39.13:726,39,0	0/0:18,0:18:42.14:0,42,1064	0/0:29,0:29:87.30:0,87,2274	0/0:41,0:41:99:0,117,3081	1/1:3,23:26:57.20:1062,57,0	0/0:27,0:27:78.27:0,78,1997	0/0:30,0:30:84.27:0,84,2184	1/1:0,12:12:33.11:616,33,0	0/0:35,0:35:99:0,105,2453	0/0:31,0:31:93.32:0,93,2376	0/0:11,0:11:33.11:0,33,863
chr10	18465353	.	T	TGG	21780.51	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=2.346;DP=706;FS=1.364;HRun=2;HaplotypeScore=139.8758;InbreedingCoeff=0.9891;MQ=89.85;MQ0=0;MQRankSum=-7.833;QD=44.18;ReadPosRankSum=4.707;VQSLOD=4.7610;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,38:44:99:1798,99,0	1/1:0,15:15:32.87:617,33,0	0/0:32,0:32:90.26:0,90,1283	0/0:27,0:27:75.21:0,75,1046	1/1:2,18:22:39.09:675,39,0	1/1:0,29:29:87.26:1592,87,0	1/1:0,18:18:54.19:1011,54,0	0/0:30,0:30:84.28:0,84,1235	0/0:28,0:28:81.27:0,81,1192	1/1:4,28:32:84.29:1560,84,0	1/1:1,15:16:36.08:635,36,0	1/1:1,15:16:33.11:618,33,0	1/1:4,24:28:78.19:1349,78,0	1/1:1,21:22:57.20:1065,57,0	1/1:4,26:30:75.17:1315,75,0	1/1:4,30:34:93.23:1663,93,0	1/1:2,18:21:48.16:899,48,0	1/1:1,22:24:54.19:1011,54,0	0/0:19,0:19:57.18:0,57,822	0/0:33,0:33:96.32:0,96,1407	0/0:44,0:44:99:0,126,1827	1/1:4,15:19:42.13:738,42,0	1/1:3,21:25:51.17:946,51,0	1/1:3,18:21:44.91:808,45,0	1/1:1,17:18:39.13:730,39,0	1/1:1,26:27:78.25:1416,78,0	1/1:2,27:29:66.23:1236,66,0	1/1:0,3:3:8.94:96,9,0
chr10	18466088	.	CTCTG	C	4158.66	PASS	AB=0.813;AC=24;AF=0.444;AN=54;BaseQRankSum=7.892;DP=639;FS=0.000;HRun=0;HaplotypeScore=130.6929;InbreedingCoeff=0.8766;MQ=62.77;MQ0=7;MQRankSum=1.228;QD=14.85;ReadPosRankSum=1.918;VQSLOD=3.1905;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:10,0:25:0:0,0,0	0/0:15,0:15:36.11:0,36,794	0/0:37,0:26:5.17:0,5,143	0/0:29,0:23:18.05:0,18,301	0/0:24,0:24:51.14:0,51,1100	1/1:6,15:21:32.28:401,32,0	./.	1/1:28,2:27:19.23:231,19,0	0/0:27,0:27:63.20:0,63,1465	0/0:20,0:20:39.12:0,39,806	0/0:15,0:15:21.06:0,21,456	1/1:5,14:19:39.09:587,39,0	0/0:21,0:21:27.07:0,27,859	0/0:18,0:18:33.10:0,33,635	1/1:6,16:22:23.96:327,24,0	1/1:2,15:17:23.95:326,24,0	0/0:35,1:36:78.21:0,78,1844	1/1:5,14:19:36.10:553,36,0	1/1:12,3:15:9.03:145,9,0	1/1:4,17:22:33.04:501,33,0	1/1:9,14:23:27.09:435,27,0	1/1:12,17:29:18.06:290,18,0	0/1:19,0:19:6.12:6,0,748	0/0:40,1:41:11.58:0,12,1089	1/1:6,13:19:24.04:358,24,0	0/0:26,0:26:57.12:0,57,1108	0/0:20,0:20:39.12:0,39,850	0/0:15,0:15:15.02:0,15,264
chr10	18466152	.	G	GTCTC	1285.06	PASS	AB=0.980;AC=13;AF=0.232;AN=56;BaseQRankSum=6.662;DP=643;FS=32.059;HRun=0;HaplotypeScore=176.8788;InbreedingCoeff=-0.1606;MQ=50.12;MQ0=22;MQRankSum=-5.370;QD=5.10;ReadPosRankSum=-1.332;VQSLOD=1.1924;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:24:23.51:24,0,41	0/1:12,1:13:93.99:101,0,94	0/0:32,0:9:20.88:0,21,300	0/0:87,0:18:24.70:0,25,331	0/1:19,1:20:25.88:26,0,285	0/0:15,0:15:8.62:0,9,89	0/0:18,0:17:18.66:0,19,179	0/1:47,0:46:99:256,0,688	0/0:20,0:20:48.01:0,48,864	0/1:26,0:26:99:602,0,130	0/0:11,0:11:15.01:0,15,182	0/0:14,0:14:20.79:0,21,269	0/1:24,0:23:99:119,0,236	0/1:18,1:18:45.08:45,0,138	0/0:19,0:18:22.81:0,23,249	0/0:18,0:18:1.59:0,2,109	0/0:25,0:25:22.09:0,22,381	0/0:12,0:12:35.97:0,36,442	0/1:18,0:15:68.49:68,0,242	0/0:21,0:19:36.06:0,36,456	0/0:19,0:17:21.88:0,22,241	0/0:24,0:23:20.61:0,21,245	1/1:14,1:14:5.71:32,6,0	0/0:35,0:34:17.65:0,18,423	0/0:21,0:21:25.07:0,25,274	0/1:20,0:21:91.97:92,0,236	0/1:19,0:19:49.67:50,0,259	0/1:6,0:6:24.50:24,0,45
chr10	18466160	.	G	GTCTCTG	7319.89	PASS	AB=1.000;AC=49;AF=0.875;AN=56;BaseQRankSum=1.951;DP=608;FS=3.760;HRun=0;HaplotypeScore=161.1991;InbreedingCoeff=0.5730;MQ=44.85;MQ0=20;MQRankSum=-0.281;QD=14.79;ReadPosRankSum=-0.521;VQSLOD=4.0683;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:20:9.29:190,9,0	1/1:15,0:14:27.50:448,27,0	0/0:24,0:6:12.02:0,12,135	0/0:71,0:12:3:0,3,29	1/1:19,0:19:18.03:313,18,0	1/1:14,0:14:5.66:61,6,0	0/1:21,0:20:10.38:121,0,10	1/1:44,0:43:99:692,104,0	0/0:16,0:16:23.68:0,24,509	1/1:27,0:27:44.84:1005,45,0	1/1:10,0:10:2.99:24,3,0	1/1:12,0:12:5.90:37,6,0	1/1:24,0:23:29.76:442,30,0	1/1:18,0:16:20.94:376,21,0	1/1:16,0:15:14.96:167,15,0	1/1:17,0:17:13.78:118,14,0	1/1:26,0:26:27.38:343,27,0	1/1:13,0:13:5.25:131,5,0	1/1:20,0:17:38.62:359,39,0	1/1:21,0:18:12.32:101,12,0	1/1:17,0:15:15.88:150,16,0	1/1:24,0:23:8.52:84,9,0	1/1:19,0:18:6.02:138,6,0	1/1:33,0:32:21.04:309,21,0	1/1:17,0:17:17.86:187,18,0	1/1:10,11:21:42.58:780,43,0	1/1:17,0:17:27.37:546,27,0	1/1:8,0:7:11.99:196,12,0
chr10	18466170	.	C	CTG	5254.35	PASS	AB=0.935;AC=44;AF=0.786;AN=56;BaseQRankSum=0.243;DP=582;FS=6.720;HRun=0;HaplotypeScore=136.8672;InbreedingCoeff=0.2412;MQ=37.47;MQ0=27;MQRankSum=2.947;QD=10.64;ReadPosRankSum=3.596;VQSLOD=3.8335;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:22:8.42:58,8,0	1/1:15,0:14:27.34:224,27,0	0/0:17,0:4:12.02:0,12,127	0/0:55,0:2:3:0,3,29	1/1:16,0:16:17.97:167,18,0	1/1:14,0:14:5.86:52,6,0	0/1:19,1:18:14.34:88,0,14	1/1:12,36:46:34.33:1396,34,0	0/0:15,0:15:42.09:0,42,600	0/1:28,0:28:99:322,0,328	1/1:12,0:10:2.98:24,3,0	1/1:12,0:11:0.63:25,1,0	0/1:24,0:23:6.72:220,0,7	1/1:18,0:16:20.44:172,20,0	1/1:14,0:13:16.19:130,16,0	1/1:19,0:19:13.81:98,14,0	1/1:22,0:22:30.82:232,31,0	1/1:11,1:12:10.74:174,11,0	1/1:8,13:17:22.17:446,22,0	0/1:10,9:18:7.49:174,0,7	1/1:11,4:13:15.77:214,16,0	1/1:24,0:23:8.50:74,9,0	1/1:23,0:22:6.01:71,6,0	1/1:28,1:28:19.91:172,20,0	1/1:14,0:13:17.32:140,17,0	0/1:23,0:22:94.38:294,0,94	1/1:15,0:15:27.08:231,27,0	0/1:9,0:7:4.07:57,0,4
chr10	18466198	.	CTCTG	C	1256.85	PASS	AB=0.996;AC=35;AF=0.648;AN=54;BaseQRankSum=0.553;DP=481;FS=6.103;HRun=0;HaplotypeScore=140.7810;InbreedingCoeff=0.0126;MQ=32.53;MQ0=25;MQRankSum=0.544;QD=3.31;ReadPosRankSum=-3.786;VQSLOD=0.8877;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:31,0:26:3.49:21,0,3	0/1:12,0:11:11.44:37,0,11	./.	0/0:25,0:2:0:0,0,0	1/1:13,1:13:2.87:23,3,0	1/1:10,0:10:8.77:77,9,0	1/1:10,1:9:2.42:34,2,0	0/1:34,0:30:3.58:197,0,4	0/0:21,0:21:42.09:0,42,1135	0/1:22,1:23:80.85:167,0,81	0/1:15,0:13:0:0,0,0	1/1:8,0:7:5.45:56,5,0	0/1:19,0:18:17.43:76,0,17	0/1:14,0:13:2.63:40,0,3	1/1:14,1:14:10.46:58,10,0	1/1:15,0:15:11.54:90,12,0	0/1:15,0:14:9.99:14,0,10	0/1:7,0:7:35.90:36,0,36	0/1:17,0:12:40.89:79,0,41	1/1:19,0:16:1.02:82,1,0	1/1:14,0:12:13.75:98,14,0	1/1:21,0:20:0.38:1,0,0	1/1:27,0:24:2.82:21,3,0	0/0:26,0:25:7.66:0,8,34	1/1:10,0:9:8.92:63,9,0	0/1:20,0:18:61.40:74,0,61	0/0:19,0:17:6.97:0,7,76	1/1:9,0:7:8.81:58,9,0
chr10	18466205	.	T	TCACA	753.70	PASS	AB=0.966;AC=17;AF=0.304;AN=56;BaseQRankSum=7.669;DP=466;FS=20.220;HRun=0;HaplotypeScore=132.6655;InbreedingCoeff=-0.1794;MQ=32.38;MQ0=23;MQRankSum=-3.074;QD=3.40;ReadPosRankSum=0.687;VQSLOD=0.8700;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:25:11.43:0,11,145	0/1:9,0:9:42.54:91,0,43	0/0:12,0:2:2.98:0,3,21	0/0:28,0:4:1.25:0,1,3	0/0:14,0:13:2.82:0,3,26	0/1:9,0:9:20.87:84,0,21	0/1:9,0:7:4.17:4,0,26	0/0:27,0:23:63.10:0,63,788	0/0:20,0:20:57.20:0,57,1117	0/0:21,0:21:16.23:0,16,764	0/1:14,0:12:0:0,0,0	1/1:8,0:7:5.05:40,5,0	0/1:17,0:17:63.48:161,0,63	0/1:15,0:13:71.91:108,0,72	0/1:14,0:13:1.01:30,0,1	0/1:11,0:11:26.72:27,0,50	0/1:14,1:14:30.36:59,0,30	0/1:6,0:6:24.86:25,0,157	0/0:17,0:13:33.01:0,33,409	0/0:21,0:18:28.32:0,28,338	0/0:14,0:12:11.82:0,12,172	0/1:20,0:19:0.15:0,0,0	0/0:29,0:26:1.45:0,1,40	0/1:24,0:23:24.84:25,0,50	0/0:11,0:10:6.02:0,6,110	0/1:19,1:18:99:214,0,337	0/1:13,6:18:19.86:20,0,177	0/1:9,0:7:8.28:8,0,42
chr10	18466211	.	T	TCACACACACA	2795.95	PASS	AB=0.997;AC=21;AF=0.375;AN=56;BaseQRankSum=2.878;DP=477;FS=31.574;HRun=0;HaplotypeScore=164.4873;InbreedingCoeff=-0.0465;MQ=33.59;MQ0=19;MQRankSum=-1.020;QD=11.60;ReadPosRankSum=0.855;VQSLOD=1.3183;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:27:17.56:0,18,334	0/1:9,0:8:36.40:277,0,36	0/0:16,0:3:9:0,9,182	0/0:33,0:6:8.99:0,9,140	0/0:11,0:10:0:0,0,0	1/1:8,0:8:5.40:221,5,0	0/1:9,0:7:12.91:48,0,13	0/0:30,0:26:65.78:0,66,875	0/0:20,0:20:57.20:0,57,1869	0/1:22,0:22:69.07:69,0,501	0/0:11,0:10:0:0,0,0	1/1:8,0:7:5.92:162,6,0	0/1:21,0:20:99:543,0,121	0/1:16,0:14:72.85:341,0,73	0/1:13,0:12:6.90:84,0,7	0/1:10,0:10:12.94:118,0,13	0/1:16,0:15:71.11:149,0,71	0/1:6,0:6:0.14:94,0,0	0/0:15,0:12:29.33:0,29,606	0/0:21,0:18:25.64:0,26,680	0/0:17,0:15:17.60:0,18,348	1/1:19,0:18:0.89:3,1,0	0/0:20,7:27:1.55:0,2,4	0/1:24,0:24:8.60:9,0,66	0/1:11,0:10:4.57:19,0,5	0/1:19,0:17:99:630,0,228	0/1:22,0:20:85.98:86,0,212	1/1:7,0:6:2.77:97,3,0
chr10	18466213	.	T	TCACACACACA	3731.08	PASS	AB=0.976;AC=25;AF=0.446;AN=56;BaseQRankSum=2.099;DP=494;FS=28.270;HRun=0;HaplotypeScore=165.9672;InbreedingCoeff=0.0561;MQ=34.95;MQ0=17;MQRankSum=-3.316;QD=12.91;ReadPosRankSum=-0.607;VQSLOD=0.7710;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:27:20.58:0,21,372	0/1:10,0:9:20.05:299,0,20	0/0:18,0:4:12.04:0,12,256	0/0:36,0:7:12.51:0,13,230	0/1:7,1:12:0:0,0,0	1/1:6,0:6:5.56:221,6,0	0/1:10,0:8:1.26:91,0,1	0/1:28,0:25:2.39:2,0,510	0/0:21,0:21:57.18:0,57,1731	0/1:24,0:24:99:154,0,102	0/0:10,0:9:0:0,0,0	1/1:8,0:7:8.89:190,9,0	0/1:21,0:20:9.86:696,0,10	0/1:16,0:14:19.75:408,0,20	0/1:14,0:13:3.09:104,0,3	1/1:11,0:11:3.40:125,3,0	0/1:17,0:16:14.17:193,0,14	1/1:7,0:7:8.84:136,9,0	0/0:14,0:13:27.64:0,28,412	0/0:23,0:20:33.44:0,33,604	0/0:20,0:18:23.61:0,24,415	1/1:20,0:19:3.88:27,4,0	0/0:31,0:28:2.97:0,3,20	0/1:24,0:23:9.52:10,0,38	0/1:12,0:11:15.30:44,0,15	0/1:20,0:18:50.13:776,0,50	0/1:22,0:20:39.21:138,0,39	1/1:6,0:5:3.01:119,3,0
chr10	18467532	.	AC	A	1465.98	PASS	AC=44;AF=0.917;AN=48;BaseQRankSum=0.933;DP=119;FS=2.163;HRun=1;HaplotypeScore=21.5180;InbreedingCoeff=0.1962;MQ=43.96;MQ0=72;MQRankSum=-2.889;QD=18.56;ReadPosRankSum=2.207;VQSLOD=3.9748;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,1:1:3:25,3,0	./.	0/0:5,0:1:2.84:0,3,14	0/0:11,0:2:5.98:0,6,67	1/1:0,4:4:11.93:117,12,0	1/1:0,3:3:9.03:116,9,0	1/1:6,1:1:3.01:35,3,0	1/1:7,2:2:6.02:82,6,0	1/1:1,1:1:3.01:41,3,0	1/1:1,3:3:9.03:121,9,0	1/1:0,2:2:6.02:76,6,0	1/1:1,2:2:6.02:72,6,0	1/1:2,3:3:9.03:123,9,0	1/1:1,1:1:3:26,3,0	1/1:1,3:3:9.03:118,9,0	1/1:0,1:1:3.01:41,3,0	1/1:1,2:2:3.01:41,3,0	./.	1/1:1,2:2:6:64,6,0	1/1:1,2:2:3.01:41,3,0	./.	1/1:2,2:2:6.02:70,6,0	1/1:0,2:2:6.02:81,6,0	./.	1/1:0,1:1:3.01:41,3,0	1/1:2,4:4:12.04:158,12,0	1/1:1,1:1:3.01:41,3,0	1/1:0,1:1:3.01:41,3,0
chr10	18467668	.	T	TG	112.10	PASS	AB=1.000;AC=13;AF=0.813;AN=16;BaseQRankSum=0.627;DP=46;FS=6.803;HRun=0;HaplotypeScore=21.2436;MQ=146.38;MQ0=2;MQRankSum=-1.625;QD=2.67;ReadPosRankSum=-1.468;VQSLOD=0.8040;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/1:12,0:8:15.37:21,0,15	0/1:21,0:9:33.95:34,0,62	./.	./.	./.	./.	1/1:0,2:2:2.97:20,3,0	1/1:1,1:2:3.01:36,3,0	0/1:1,0:1:0:0,0,0	./.	./.	./.	./.	1/1:1,1:2:2.97:20,3,0	./.	./.	1/1:0,1:1:3.01:30,3,0	./.	./.	./.	./.	./.	./.	./.	./.	1/1:0,1:1:3:29,3,0
chr10	18467853	.	T	TCTC	16573.40	PASS	AB=0.950;AC=41;AF=0.732;AN=56;BaseQRankSum=-0.326;DP=599;FS=10.421;HRun=0;HaplotypeScore=139.1448;InbreedingCoeff=0.8905;MQ=68.67;MQ0=2;MQRankSum=-6.796;QD=44.08;ReadPosRankSum=3.985;VQSLOD=6.1406;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,120,1841	1/1:2,3:5:12.04:250,12,0	0/0:32,0:28:66.32:0,66,952	0/0:50,0:36:54.21:0,54,1068	1/1:3,20:23:54.18:1093,54,0	1/1:6,12:18:42.12:835,42,0	1/1:7,19:26:54.18:1146,54,0	0/0:30,0:30:84.21:0,84,1217	0/0:23,0:23:63.21:0,63,999	1/1:14,8:23:48.14:876,48,0	1/1:2,8:10:18.06:391,18,0	1/1:5,21:26:57.15:1171,57,0	1/1:4,17:21:54.19:1126,54,0	1/1:8,18:27:69.14:1360,69,0	1/1:12,11:23:51.17:1061,51,0	1/1:3,16:20:48.16:1026,48,0	1/1:6,10:16:30.09:597,30,0	1/1:4,7:11:27.07:546,27,0	0/0:17,0:17:42.08:0,42,604	0/1:18,1:19:11.20:11,0,726	0/0:26,0:26:62.50:0,62,954	1/1:5,6:11:24.07:481,24,0	1/1:5,9:15:33.11:687,33,0	1/1:3,24:27:51.56:1061,52,0	1/1:1,7:8:21.07:458,21,0	1/1:4,23:27:69.21:1404,69,0	1/1:2,13:15:42.14:905,42,0	1/1:3,2:5:5.99:86,6,0
chr10	18467885	.	C	CTGTG	5463.82	PASS	AB=0.926;AC=33;AF=0.611;AN=54;BaseQRankSum=9.976;DP=642;FS=14.907;HRun=0;HaplotypeScore=241.6348;InbreedingCoeff=0.6961;MQ=60.91;MQ0=6;MQRankSum=-9.641;QD=15.09;ReadPosRankSum=-0.500;VQSLOD=2.8278;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:78.20:0,78,1188	1/1:6,0:6:18.06:385,18,0	0/0:49,0:30:21.56:0,22,322	0/0:49,0:30:19.20:0,19,312	1/1:18,0:18:9:119,9,0	1/1:20,1:21:21.42:356,21,0	1/1:25,4:26:20.54:386,21,0	0/0:32,0:33:62.83:0,63,890	0/0:30,0:30:56.20:0,56,1039	1/1:15,1:17:33.11:639,33,0	0/1:10,1:11:0:0,0,0	1/1:27,4:32:13.16:503,13,0	1/1:22,3:25:44.65:774,45,0	0/1:19,1:20:6.57:33,0,7	0/1:27,0:27:0:1,0,0	0/1:29,0:29:31.80:516,0,32	1/1:10,2:11:9.03:165,9,0	1/1:8,0:8:12:214,12,0	0/0:24,0:23:24.06:0,24,349	0/0:24,0:24:29.62:0,30,471	0/0:23,0:23:39.06:0,39,657	1/1:6,1:7:6.01:95,6,0	0/1:11,5:16:0:0,0,0	1/1:18,4:23:6.21:72,6,0	1/1:5,1:6:3.01:42,3,0	1/1:29,2:33:41.56:659,42,0	1/1:17,2:21:32.78:505,33,0	./.
chr10	18467907	.	G	GTA	3648.55	PASS	AB=0.717;AC=31;AF=0.574;AN=54;BaseQRankSum=9.085;DP=571;FS=13.513;HRun=0;HaplotypeScore=209.9659;InbreedingCoeff=0.5411;MQ=48.08;MQ0=20;MQRankSum=-7.805;QD=11.96;ReadPosRankSum=4.735;VQSLOD=2.1249;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:43:72.23:0,72,1064	1/1:0,6:6:18.06:309,18,0	0/0:42,0:13:28.43:0,28,379	0/0:29,0:15:26.27:0,26,371	1/1:6,4:10:2.96:55,3,0	1/1:13,8:21:16.28:258,16,0	1/1:18,6:21:15.32:253,15,0	0/0:39,0:38:96.20:0,96,1395	0/0:32,0:32:80.99:0,81,1187	0/1:11,4:15:44.40:281,0,44	0/1:4,6:10:0:0,0,0	1/1:16,16:32:20.27:428,20,0	1/1:15,10:25:29.19:590,29,0	0/0:11,6:17:5.12:0,5,22	1/1:8,17:25:0.39:1,0,0	0/1:13,17:30:23.05:431,0,23	1/1:11,2:12:5.30:40,5,0	1/1:4,3:7:5.69:165,6,0	0/0:28,0:26:62.30:0,62,867	0/0:17,1:18:26.81:0,27,382	0/0:17,0:17:39.10:0,39,602	1/1:6,3:9:3.01:34,3,0	0/1:11,5:16:0.07:0,0,0	1/1:14,5:19:2.58:25,3,0	1/1:4,3:6:3.01:36,3,0	0/1:14,6:20:56.88:364,0,57	1/1:9,7:16:11.96:379,12,0	./.
chr10	18467908	.	TGA	T	1322.75	PASS	AB=0.882;AC=21;AF=0.389;AN=54;BaseQRankSum=7.348;DP=607;FS=5.871;HRun=0;HaplotypeScore=219.3920;InbreedingCoeff=0.1578;MQ=47.22;MQ0=20;MQRankSum=-5.599;QD=4.12;ReadPosRankSum=6.161;VQSLOD=2.0179;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,1:46:26:0,26,838	1/1:7,0:7:14.75:94,15,0	0/0:42,0:13:9.35:0,9,112	0/0:28,0:15:11.37:0,11,176	1/1:8,3:11:3.01:30,3,0	1/1:17,4:21:14.55:127,15,0	1/1:14,10:21:14.94:147,15,0	0/0:39,0:38:64.35:0,64,1182	0/0:32,0:32:43.76:0,44,1100	0/1:15,5:20:66.81:219,0,67	./.	1/1:32,0:33:14.35:132,14,0	0/1:22,4:26:24.48:81,0,24	0/1:21,2:23:25.23:25,0,77	0/1:22,3:25:0.16:0,0,0	0/1:27,2:29:23.60:125,0,24	0/1:13,1:13:1.55:15,0,2	0/1:5,2:7:24.86:133,0,25	0/0:27,1:26:13.95:0,14,632	0/1:18,1:19:16.12:16,0,215	0/0:22,0:21:39.06:0,39,555	0/0:9,1:10:0:0,0,0	0/0:14,2:16:0:0,0,0	0/1:21,2:23:0.34:1,0,0	0/0:8,1:8:0.89:0,1,2	0/1:16,5:21:55.11:244,0,55	0/1:16,2:18:31.91:91,0,32	0/0:2,0:2:2.99:0,3,24
chr10	18467915	.	G	GAGAGAGAC	5398.20	PASS	AB=0.986;AC=35;AF=0.648;AN=54;BaseQRankSum=7.936;DP=608;FS=4.965;HRun=0;HaplotypeScore=261.5552;InbreedingCoeff=0.1674;MQ=43.29;MQ0=20;MQRankSum=-6.023;QD=11.86;ReadPosRankSum=-1.734;VQSLOD=3.0402;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:49,0:48:56.35:56,0,704	1/1:8,0:8:20.95:336,21,0	0/0:28,0:7:9.48:0,9,136	0/0:20,0:9:11.38:0,11,224	1/1:13,0:13:3.01:30,3,0	0/1:23,0:23:6.62:97,0,7	1/1:26,0:23:9.72:112,10,0	0/0:41,0:40:1.40:0,1,1199	0/0:31,0:31:44.39:0,44,1668	1/1:22,1:23:27.66:1164,28,0	0/0:13,0:13:0.47:0,0,1	0/1:32,0:32:0.24:201,0,0	1/1:23,4:27:27.07:496,27,0	1/1:21,3:24:14.16:263,14,0	1/1:27,0:27:3:25,3,0	0/1:28,0:28:55.12:168,0,55	0/1:12,2:13:8.38:180,0,8	1/1:9,0:9:13.55:183,14,0	0/1:26,0:24:99:181,0,556	0/1:21,0:21:43.06:43,0,228	0/1:25,0:23:76.21:76,0,513	0/1:10,0:10:0:0,0,0	./.	1/1:17,2:19:2.06:24,2,0	1/1:10,0:9:1.10:5,1,0	1/1:18,1:19:51:978,51,0	1/1:17,2:19:28.83:684,29,0	1/1:3,0:3:9:95,9,0
chr10	18467925	.	CAG	C	710.04	PASS	AB=0.970;AC=13;AF=0.241;AN=54;BaseQRankSum=-1.939;DP=600;FS=17.441;HRun=0;HaplotypeScore=225.2871;InbreedingCoeff=-0.1051;MQ=40.61;MQ0=17;MQRankSum=2.251;QD=2.33;ReadPosRankSum=-5.476;VQSLOD=-0.5898;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:47,1:48:99:164,0,559	0/0:8,0:8:19.40:0,19,150	0/0:20,0:4:3:0,3,49	0/0:12,0:5:9.03:0,9,147	./.	0/0:18,4:22:14.47:0,14,87	0/1:24,0:21:58.65:59,0,67	0/1:42,2:43:99:145,0,891	0/0:28,0:28:59.18:0,59,1060	0/0:26,0:26:60.30:0,60,671	0/0:17,0:17:8.98:0,9,141	0/1:28,0:28:65.51:66,0,145	0/0:26,0:26:50.19:0,50,470	0/0:26,0:26:24.91:0,25,440	1/1:29,1:30:11.79:159,12,0	0/1:29,0:29:16.04:16,0,144	0/0:15,0:14:14.84:0,15,172	0/1:11,0:11:52.49:52,0,102	0/1:28,0:28:50.68:51,0,620	0/1:18,0:18:59.93:60,0,81	0/1:21,1:20:52.96:53,0,414	0/1:11,2:13:0:0,0,0	0/0:15,0:15:3.01:0,3,47	0/0:20,0:20:5.45:0,5,85	0/1:9,1:10:9.55:34,0,10	0/0:23,0:23:41.63:0,42,501	0/0:19,0:19:38.75:0,39,399	0/0:3,0:3:6.02:0,6,99
chr10	18467927	.	G	GAGAC	593.47	PASS	AB=0.943;AC=13;AF=0.232;AN=56;BaseQRankSum=1.059;DP=612;FS=33.405;HRun=0;HaplotypeScore=247.1617;InbreedingCoeff=-0.0503;MQ=40.69;MQ0=19;MQRankSum=0.139;QD=1.99;ReadPosRankSum=-3.496;VQSLOD=0.7334;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:48,0:48:85.46:85,0,493	0/0:8,0:8:20.89:0,21,258	0/0:21,0:4:5.95:0,6,75	0/0:11,0:5:9.03:0,9,147	0/1:16,0:16:0:0,0,0	0/0:20,2:22:3.46:0,3,142	0/1:25,0:22:30.35:30,0,208	0/1:41,0:39:97.61:98,0,833	0/0:27,0:27:62.65:0,63,1244	0/0:28,0:28:59.54:0,60,837	0/0:17,0:17:9.03:0,9,150	0/1:25,2:28:38.25:38,0,277	0/0:26,0:26:31.81:0,32,609	0/0:27,0:27:29.62:0,30,457	1/1:29,3:32:10.69:83,11,0	0/0:23,5:28:0.80:0,1,133	0/0:15,0:14:17.65:0,18,251	0/1:13,0:13:52.14:52,0,212	0/1:16,0:29:99:250,0,512	0/1:18,0:18:14.64:15,0,157	0/1:23,0:21:51.16:51,0,371	0/1:11,2:13:0:0,0,0	0/0:15,0:15:3.01:0,3,51	0/0:21,0:21:5.32:0,5,110	0/1:10,1:11:8.78:34,0,9	0/0:23,0:23:56.66:0,57,798	0/0:20,0:20:38.77:0,39,537	0/0:5,0:5:8.98:0,9,132
chr10	18467941	.	GAC	G	218.28	PASS	AB=0.922;AC=14;AF=0.250;AN=56;BaseQRankSum=6.692;DP=627;FS=9.712;HRun=0;HaplotypeScore=225.3812;InbreedingCoeff=-0.2043;MQ=41.30;MQ0=7;MQRankSum=-5.329;QD=0.69;ReadPosRankSum=2.043;VQSLOD=1.2491;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:43.29:0,43,694	0/1:6,2:8:35.58:36,0,118	1/1:11,0:3:2.04:6,2,0	0/0:8,0:4:8.94:0,9,74	0/0:14,2:16:6.02:0,6,115	0/1:26,0:26:9.13:9,0,116	0/0:25,0:22:27.36:0,27,316	0/1:48,0:44:11.74:12,0,768	0/0:27,0:27:76.61:0,77,1293	0/1:27,2:29:73.20:73,0,806	0/0:14,4:18:8.98:0,9,173	0/1:27,0:27:1.82:2,0,179	0/1:22,6:28:75.86:76,0,440	0/1:25,4:29:1.23:1,0,620	0/0:32,0:32:26.91:0,27,385	0/1:25,0:25:16.99:17,0,182	0/1:15,0:14:31.74:32,0,295	0/0:13,0:13:33.38:0,33,394	0/0:29,0:28:44.88:0,45,546	0/0:14,0:14:8.95:0,9,67	0/0:25,0:22:8.13:0,8,262	0/0:17,1:18:9:0,9,107	0/0:12,5:17:15.04:0,15,237	0/1:16,3:19:6.99:7,0,162	0/0:9,1:10:6.02:0,6,93	0/1:25,2:27:41.44:41,0,631	0/1:20,5:25:46.97:47,0,587	0/0:9,0:9:24.02:0,24,357
chr10	18467949	.	GAGAC	G	1818.62	PASS	AB=0.895;AC=13;AF=0.241;AN=54;BaseQRankSum=0.546;DP=643;FS=1.660;HRun=0;HaplotypeScore=221.0607;InbreedingCoeff=-0.2720;MQ=42.95;MQ0=21;MQRankSum=-5.803;QD=4.98;ReadPosRankSum=-0.413;VQSLOD=2.7609;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:28,19:47:99:227,0,1341	0/1:10,0:9:36.65:37,0,247	./.	0/0:18,0:3:0.94:0,1,2	0/0:15,0:14:9.01:0,9,191	0/1:22,7:29:88.67:89,0,312	0/0:15,9:21:27.79:0,28,674	0/1:24,20:40:99:825,0,650	0/0:27,0:27:78.16:0,78,1982	0/1:29,0:28:12.42:12,0,1271	0/0:16,0:16:8.96:0,9,248	0/1:14,10:24:99:123,0,372	0/1:24,0:23:20.46:20,0,783	0/1:29,0:29:0.08:0,0,1008	0/0:19,12:31:32.85:0,33,818	0/1:14,9:23:99:212,0,396	0/0:14,0:13:9.99:0,10,586	0/0:14,1:15:17.08:0,17,699	0/1:31,0:27:99:274,0,613	0/0:12,6:17:12.04:0,12,287	0/1:26,0:23:99:127,0,502	0/0:20,1:21:23.97:0,24,405	0/0:19,0:18:21.04:0,21,453	0/0:21,0:20:20.91:0,21,376	0/0:10,1:11:8.98:0,9,187	0/1:26,0:25:0.15:0,0,1130	0/1:23,0:23:11.58:12,0,1106	0/0:15,0:13:39.11:0,39,860
chr10	18467975	.	GAC	G	6658.80	PASS	AB=0.993;AC=42;AF=0.750;AN=56;BaseQRankSum=-0.835;DP=689;FS=7.419;HRun=0;HaplotypeScore=170.5740;InbreedingCoeff=0.5533;MQ=55.83;MQ0=29;MQRankSum=-1.887;QD=12.64;ReadPosRankSum=4.316;VQSLOD=3.8277;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,1:42:10.70:0,11,515	1/1:2,6:7:9.03:123,9,0	0/1:32,0:15:14.44:14,0,267	0/0:51,0:23:24.67:0,25,294	1/1:6,4:9:12.04:164,12,0	1/1:26,0:26:28.56:147,29,0	0/1:27,0:24:14.62:102,0,15	0/1:46,0:44:99:105,0,344	0/0:24,0:24:63.06:0,63,972	1/1:4,22:25:59.80:701,60,0	1/1:9,4:14:15.02:171,15,0	1/1:19,0:19:10.75:112,11,0	1/1:9,17:25:40.94:567,41,0	1/1:5,23:28:48.22:658,48,0	1/1:33,0:31:42.26:199,42,0	1/1:23,0:22:7.35:99,7,0	1/1:3,15:18:19.19:472,19,0	1/1:19,0:19:4.08:167,4,0	0/1:28,0:23:90.03:90,0,156	0/0:24,0:23:14.10:0,14,271	0/0:20,1:19:26.94:0,27,218	1/1:21,0:21:22.66:117,23,0	1/1:2,13:14:21.07:288,21,0	1/1:8,14:20:23.61:328,24,0	1/1:14,0:13:14.37:79,14,0	1/1:13,15:26:72.09:882,72,0	1/1:5,22:27:41.69:574,42,0	1/1:4,12:14:29.24:501,29,0
chr10	18467981	.	CAG	C	4839.39	PASS	AB=1.000;AC=35;AF=0.625;AN=56;BaseQRankSum=2.545;DP=670;FS=8.692;HRun=0;HaplotypeScore=164.0020;InbreedingCoeff=0.6310;MQ=59.83;MQ0=25;MQRankSum=1.455;QD=11.83;ReadPosRankSum=8.834;VQSLOD=3.1976;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:60.58:0,61,1182	0/1:8,0:7:13.27:37,0,13	0/0:34,1:18:26.74:0,27,437	0/0:54,0:25:41.56:0,42,464	0/1:11,0:10:9.31:52,0,9	1/1:6,18:24:29.38:377,29,0	1/1:13,11:21:35.22:439,35,0	0/0:42,0:39:90.17:0,90,1249	0/0:22,0:22:57.18:0,57,911	0/1:26,0:25:0.99:185,0,1	1/1:12,0:12:8.92:47,9,0	1/1:10,9:19:27.24:336,27,0	1/1:24,0:23:34.79:229,35,0	1/1:27,0:27:4.67:217,5,0	1/1:9,24:31:44.92:567,45,0	1/1:13,7:20:30.04:365,30,0	0/1:18,0:18:5.23:204,0,5	1/1:3,18:21:36.11:453,36,0	0/0:21,0:19:33.10:0,33,483	0/0:27,0:26:46.34:0,46,642	0/0:21,0:19:27.09:0,27,443	1/1:3,18:21:23.94:302,24,0	0/1:15,0:14:1.66:90,0,2	1/1:21,0:19:3.04:123,3,0	1/1:5,10:14:14.88:189,15,0	1/1:28,0:26:3.75:211,4,0	1/1:25,0:24:19.77:225,20,0	1/1:16,0:14:24.61:193,25,0
chr10	18468299	.	T	TCC	767.16	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-1.487;DP=516;FS=4.020;HRun=10;HaplotypeScore=82.3863;InbreedingCoeff=0.8602;MQ=83.14;MQ0=0;MQRankSum=-0.996;QD=7.04;ReadPosRankSum=-3.839;VQSLOD=-0.4695;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:45:91.86:0,92,887	0/0:7,0:7:21.05:0,21,213	0/0:21,0:21:25.72:0,26,270	0/0:16,0:15:7.47:0,7,119	0/0:13,0:13:21.01:0,21,213	1/1:7,3:20:12.99:80,13,0	1/1:11,13:26:6.75:57,7,0	0/0:27,0:27:17.50:0,17,100	0/0:18,0:19:44.80:0,45,435	0/0:21,0:23:35.42:0,35,328	0/0:14,0:15:32.75:0,33,310	1/1:1,5:6:3.01:45,3,0	0/0:13,0:14:20.72:0,21,194	0/0:14,0:14:11.95:0,12,120	1/1:4,6:10:9.03:132,9,0	1/1:2,13:15:6.02:89,6,0	0/0:43,0:45:64.35:0,64,813	1/1:10,0:11:21.02:219,21,0	0/0:12,0:12:19.04:0,19,67	0/0:13,0:14:6.93:0,7,30	0/0:22,0:23:28.04:0,28,94	1/1:7,3:11:26.52:268,27,0	0/0:20,0:20:39.06:0,39,396	0/0:28,0:30:65.51:0,66,633	1/1:5,3:10:8:62,8,0	0/0:15,0:15:33.04:0,33,335	0/0:14,0:14:8.82:0,9,281	0/0:16,0:18:53.53:0,54,511
chr10	18468305	.	C	CA	2374.29	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=-6.805;DP=545;FS=9.988;HRun=0;HaplotypeScore=63.5588;InbreedingCoeff=0.8044;MQ=82.64;MQ0=0;MQRankSum=0.101;QD=27.29;ReadPosRankSum=1.052;VQSLOD=3.7015;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,115,1408	0/0:11,0:11:27.07:0,27,344	0/0:21,0:20:56.17:0,56,600	0/0:18,0:16:8.42:0,8,224	0/0:18,0:18:45.05:0,45,493	0/0:21,0:21:3.39:0,3,123	0/0:24,0:24:11.30:0,11,89	1/1:1,26:27:75.07:882,75,0	0/0:18,0:18:54.09:0,54,681	0/0:24,0:24:63.04:0,63,693	0/0:18,0:18:47.96:0,48,549	0/0:7,0:7:2.45:0,2,17	0/0:12,0:12:35.96:0,36,390	0/0:13,0:13:27.05:0,27,300	0/0:12,0:12:20.82:0,21,144	0/0:14,0:14:8.89:0,9,63	0/0:49,0:49:99:0,142,1622	0/0:15,0:15:28.30:0,28,187	1/1:0,9:9:27.08:361,27,0	1/1:3,15:18:36.92:470,37,0	1/1:1,23:24:60.17:817,60,0	0/0:14,0:14:16.27:0,16,109	0/0:22,0:22:56.93:0,57,676	0/0:33,0:33:93.11:0,93,1110	0/1:9,0:9:0.53:1,0,74	0/0:19,0:19:57.12:0,57,672	0/0:15,0:15:42.55:0,43,515	0/0:20,0:20:57.05:0,57,715
chr10	18469216	.	CA	C	1060.73	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=9.912;DP=668;FS=0.620;HRun=1;HaplotypeScore=67.2699;InbreedingCoeff=0.9986;MQ=59.81;MQ0=3;MQRankSum=0.631;QD=27.20;ReadPosRankSum=1.938;VQSLOD=3.5344;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,36:39:99:1156,114,0	0/0:9,0:9:27.09:0,27,422	0/0:23,0:15:42.12:0,42,644	0/0:21,0:18:48.16:0,48,750	0/0:17,0:17:51.17:0,51,812	0/0:17,0:16:51.12:0,51,764	0/0:32,0:32:90.30:0,90,1436	0/0:21,0:21:63.21:0,63,1005	0/0:21,0:21:63.20:0,63,982	0/0:30,0:30:90.31:0,90,1439	0/0:25,0:25:75.26:0,75,1199	0/0:26,0:26:75.24:0,75,1176	0/0:11,0:11:33.11:0,33,525	0/0:24,0:24:72.25:0,72,1146	0/0:32,0:32:96.33:0,96,1533	0/0:20,0:20:60.20:0,60,957	0/0:32,0:32:96.33:0,96,1530	0/0:23,0:23:69.24:0,69,1103	0/0:21,0:19:54.18:0,54,863	0/0:15,0:15:45.15:0,45,719	0/0:39,0:39:99:0,117,1869	0/0:15,0:15:45.15:0,45,719	0/0:25,0:25:75.24:0,75,1176	0/0:42,0:42:99:0,126,1984	0/0:23,0:23:69.21:0,69,1076	0/0:27,0:27:81.28:0,81,1296	0/0:25,0:24:75.23:0,75,1132	0/0:13,0:13:39.13:0,39,619
chr10	18469218	.	CTA	C	1189.40	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=9.994;DP=668;FS=0.000;HRun=0;HaplotypeScore=80.5908;InbreedingCoeff=0.9986;MQ=59.90;MQ0=3;MQRankSum=0.659;QD=31.30;ReadPosRankSum=2.151;VQSLOD=5.3369;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,36:38:99:1284,111,0	0/0:10,0:10:27.09:0,27,522	0/0:23,0:15:42.12:0,42,766	0/0:20,0:18:50.76:0,51,883	0/0:17,0:17:51.17:0,51,985	0/0:16,0:15:45.15:0,45,868	0/0:32,0:32:90.31:0,90,1725	0/0:23,0:23:66.22:0,66,1213	0/0:20,0:20:60.17:0,60,1109	0/0:29,0:29:87.30:0,87,1671	0/0:25,0:25:75.26:0,75,1448	0/0:26,0:26:78.27:0,78,1497	0/0:11,0:11:33.11:0,33,638	0/0:24,0:24:72.25:0,72,1382	0/0:33,0:33:99:0,99,1903	0/0:20,0:20:57.20:0,57,1089	0/0:32,0:32:93.28:0,93,1755	0/0:23,0:23:69.24:0,69,1319	0/0:20,0:19:57.20:0,57,1096	0/0:15,0:15:45.15:0,45,869	0/0:42,0:42:99:0,126,2365	0/0:15,0:15:45.15:0,45,859	0/0:25,0:25:75.24:0,75,1416	0/0:42,0:42:99:0,126,2424	0/0:23,0:23:69.24:0,69,1333	0/0:27,0:27:78.27:0,78,1507	0/0:24,0:23:72.25:0,72,1390	0/0:13,0:13:39.13:0,39,753
chr10	18470576	.	A	AT	18206.42	PASS	AB=1.000;AC=53;AF=0.946;AN=56;BaseQRankSum=2.099;DP=567;FS=0.000;HRun=3;HaplotypeScore=316.5613;InbreedingCoeff=0.7923;MQ=65.97;MQ0=0;MQRankSum=-7.895;QD=32.75;ReadPosRankSum=3.113;VQSLOD=3.1963;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,21:23:53.64:652,54,0	1/1:1,6:7:18.06:252,18,0	0/1:14,0:14:2.28:2,0,265	0/0:11,0:11:27.86:0,28,272	1/1:1,17:18:39.09:518,39,0	1/1:1,17:18:45.12:608,45,0	1/1:1,18:18:42.14:583,42,0	1/1:5,37:42:99:1544,112,0	1/1:2,27:29:78.26:1089,78,0	1/1:2,26:28:75.23:1016,75,0	1/1:1,17:18:48.03:604,48,0	1/1:0,28:28:75.25:1048,75,0	1/1:2,24:25:63.14:853,63,0	1/1:3,18:21:39.13:545,39,0	1/1:3,24:27:72.17:981,72,0	1/1:3,19:22:57.12:769,57,0	1/1:3,25:28:60.20:838,60,0	1/1:3,16:19:48.16:671,48,0	1/1:3,21:24:63.17:834,63,0	1/1:2,11:13:27.09:376,27,0	1/1:1,18:18:42.01:539,42,0	1/1:1,16:17:39.13:542,39,0	1/1:2,8:10:21.07:289,21,0	1/1:3,12:15:29.80:397,30,0	1/1:1,9:9:24.08:335,24,0	1/1:2,18:20:54.17:738,54,0	1/1:1,32:32:90.30:1248,90,0	1/1:0,8:8:24.08:335,24,0
chr10	18471231	.	A	ACGGCCTC	12317.31	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-4.538;DP=575;FS=0.829;HRun=0;HaplotypeScore=139.9366;InbreedingCoeff=0.9705;MQ=82.50;MQ0=0;MQRankSum=-14.630;QD=56.50;ReadPosRankSum=-1.060;VQSLOD=4.6988;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:81.25:0,81,1878	1/1:1,3:4:10.19:235,10,0	0/0:17,0:17:36.12:0,36,874	0/0:25,0:25:48.63:0,49,1017	1/1:3,12:15:11.62:361,12,0	0/0:17,0:17:39.11:0,39,895	0/0:20,0:20:48.09:0,48,972	0/0:24,0:24:54.17:0,54,1226	0/0:23,0:23:57.15:0,57,1219	1/1:5,17:22:51.12:1788,51,0	1/1:8,10:18:18.01:626,18,0	0/0:23,0:23:57.20:0,57,1385	1/1:4,12:16:30.10:1085,30,0	1/1:4,19:23:45.14:1578,45,0	0/0:23,0:23:63.22:0,63,1520	0/0:24,0:24:63.20:0,63,1488	1/1:11,21:34:44.90:1572,45,0	0/0:21,0:21:57.16:0,57,1290	0/0:14,0:14:39.10:0,39,813	0/0:21,0:20:51.16:0,51,1190	0/0:40,0:40:90.11:0,90,1923	0/0:16,0:16:42.14:0,42,1023	1/1:4,7:12:6.02:229,6,0	1/1:5,11:16:24.08:850,24,0	0/0:19,0:19:45.12:0,45,997	1/1:7,14:21:48.15:1552,48,0	1/1:7,18:26:54.19:1869,54,0	1/1:4,6:11:15.05:571,15,0
chr10	18471446	.	AAAAACCAAAACC	A	1149.75	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.820;DP=610;FS=10.577;HRun=0;HaplotypeScore=200.7186;InbreedingCoeff=0.9961;MQ=69.97;MQ0=0;MQRankSum=-5.831;QD=32.85;ReadPosRankSum=-0.281;VQSLOD=2.0790;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:18,17:35:39.13:1245,39,0	0/0:10,0:10:30.09:0,30,1450	0/0:27,0:24:39.13:0,39,1632	0/0:30,0:24:35.81:0,36,1301	0/0:20,0:20:42.14:0,42,2196	0/0:21,0:21:48.15:0,48,2607	0/0:20,0:20:48.14:0,48,2265	0/0:26,0:26:52.99:0,53,2641	0/0:21,0:21:48.16:0,48,2666	0/0:33,0:33:63.22:0,63,3341	0/0:21,0:21:42.14:0,42,2041	0/0:13,0:13:36.12:0,36,1994	0/0:22,0:22:57.20:0,57,3120	0/0:19,0:19:45.13:0,45,2425	0/0:30,0:30:69.24:0,69,3986	0/0:15,0:15:36.12:0,36,1818	0/0:35,0:35:87.30:0,87,4482	0/0:19,0:19:45.15:0,45,2563	0/0:20,0:20:27.09:0,27,1365	0/0:20,0:20:51.16:0,51,2476	0/0:14,0:14:36.12:0,36,1938	0/0:19,0:19:27.09:0,27,1552	0/0:18,0:18:39.12:0,39,1720	0/0:19,0:18:42.14:0,42,2456	0/0:11,0:11:30.10:0,30,1553	0/0:25,0:25:66.20:0,66,3285	0/0:33,0:33:83.87:0,84,4487	0/0:14,0:14:39.13:0,39,2307
chr10	18471722	.	TGG	T	6269.42	PASS	AB=0.692;AC=43;AF=0.768;AN=56;BaseQRankSum=-4.719;DP=422;FS=0.000;HRun=11;HaplotypeScore=69.5452;InbreedingCoeff=0.8149;MQ=79.11;MQ0=4;MQRankSum=0.496;QD=18.83;ReadPosRankSum=7.365;VQSLOD=3.2109;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,0:28:49.39:215,49,0	1/1:1,6:8:5.92:120,6,0	0/0:24,0:11:9.97:0,10,168	0/0:26,0:21:18.27:0,18,239	1/1:4,16:19:36.06:383,36,0	1/1:1,8:9:24.06:255,24,0	1/1:6,8:15:23.78:235,24,0	0/0:11,0:13:15.64:0,16,108	0/0:7,0:7:8.96:0,9,91	1/1:2,8:10:27.05:282,27,0	1/1:2,7:8:21.05:223,21,0	1/1:5,12:17:33.07:348,33,0	1/1:3,14:16:30.07:319,30,0	1/1:7,2:9:15:151,15,0	1/1:2,9:11:24.05:255,24,0	1/1:1,13:13:27.07:287,27,0	1/1:3,22:25:66.14:702,66,0	1/1:3,17:20:39.07:406,39,0	0/1:10,0:18:21.25:21,0,86	0/0:8,0:9:8.50:0,9,78	0/0:5,0:9:7.49:0,7,26	1/1:4,6:10:18.04:192,18,0	1/1:0,14:14:35.93:383,36,0	1/1:3,19:22:45.10:478,45,0	1/1:4,9:13:24.05:255,24,0	1/1:7,11:18:33.05:343,33,0	1/1:4,12:15:24.03:255,24,0	1/1:4,6:10:15.03:159,15,0
chr10	18471784	.	TTGTGTGTG	T	4226.13	PASS	AB=0.720;AC=28;AF=0.500;AN=56;BaseQRankSum=0.958;DP=434;FS=10.112;HRun=0;HaplotypeScore=135.4925;InbreedingCoeff=0.6262;MQ=61.55;MQ0=8;MQRankSum=-7.601;QD=17.76;ReadPosRankSum=0.731;VQSLOD=3.7353;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:13,1:21:99:103,0,107	1/1:2,1:3:3.01:76,3,0	0/0:19,0:12:3.01:0,3,42	0/0:19,0:12:6.02:0,6,96	1/1:9,6:17:15.51:379,16,0	0/0:14,0:18:30.08:0,30,747	0/0:14,0:16:30.06:0,30,526	0/1:13,0:18:13.63:14,0,66	0/0:11,0:11:19.95:0,20,733	1/1:10,16:25:45.07:851,45,0	1/1:10,5:14:16.30:358,16,0	0/0:19,0:22:30.10:0,30,789	1/1:8,5:12:24.03:499,24,0	1/1:3,7:10:11.85:135,12,0	0/0:8,0:11:20.90:0,21,369	0/0:8,0:11:12.01:0,12,185	1/1:16,5:23:17.34:319,17,0	0/0:12,0:20:36.09:0,36,702	0/1:12,2:16:3.20:168,0,3	0/1:5,1:17:24.48:133,0,24	0/0:19,1:19:8.90:0,9,66	0/0:8,0:13:21.05:0,21,486	1/1:10,4:14:11.99:246,12,0	1/1:10,4:14:8.99:173,9,0	0/0:9,0:16:39.09:0,39,759	1/1:10,4:14:18.05:359,18,0	1/1:6,1:8:9.03:201,9,0	1/1:5,3:8:9.50:212,10,0
chr10	18472775	.	C	CAAGACAG	15707.31	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-6.569;DP=656;FS=0.721;HRun=0;HaplotypeScore=142.9353;InbreedingCoeff=0.9826;MQ=79.49;MQ0=0;MQRankSum=-17.886;QD=87.75;ReadPosRankSum=-1.320;VQSLOD=4.9176;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:69.20:0,69,1695	0/0:3,0:3:6.02:0,6,150	0/0:17,0:17:44.50:0,45,1069	0/0:21,0:21:41.63:0,42,960	0/0:28,0:28:78.27:0,78,1947	1/1:3,13:17:39.13:1439,39,0	1/1:9,14:24:60.21:2205,60,0	0/0:36,0:36:93.30:0,93,2130	0/0:17,0:17:42.14:0,42,1021	0/0:19,0:19:54.19:0,54,1346	0/0:26,0:26:69.24:0,69,1650	1/1:11,10:23:51.14:1855,51,0	0/0:21,0:21:60.18:0,60,1371	0/0:24,0:24:66.20:0,66,1543	1/1:10,14:26:63.17:2226,63,0	1/1:8,19:27:66.23:2481,66,0	0/0:24,0:24:60.16:0,60,1384	1/1:13,7:20:42.14:1601,42,0	0/0:23,0:23:54.18:0,54,1149	0/0:18,0:18:48.16:0,48,1198	0/0:51,0:51:99:0,135,3316	1/1:7,9:18:45.15:1619,45,0	0/0:15,0:15:42.14:0,42,1022	0/0:29,0:29:75.21:0,75,1765	1/1:8,16:24:63.17:2281,63,0	0/0:30,0:30:84.29:0,84,2070	0/0:28,0:28:72.23:0,72,1685	0/0:16,0:16:48.15:0,48,1147
chr10	18474239	.	A	AGT	9567.87	PASS	AB=0.585;AC=25;AF=0.446;AN=56;BaseQRankSum=-11.837;DP=670;FS=5.083;HRun=0;HaplotypeScore=85.3482;InbreedingCoeff=0.9028;MQ=75.97;MQ0=0;MQRankSum=-2.509;QD=31.37;ReadPosRankSum=2.448;VQSLOD=6.9892;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:27:15.01:133,15,0	1/1:4,10:14:27.09:448,27,0	0/0:23,0:23:54:0,54,648	0/0:29,0:29:68.51:0,69,794	0/1:9,22:31:7.23:938,0,7	0/0:18,0:18:51.15:0,51,636	0/0:30,0:30:75.20:0,75,916	0/0:28,0:28:51.03:0,51,617	0/0:20,0:20:48.13:0,48,585	1/1:6,20:26:60.20:992,60,0	1/1:3,17:21:51.11:821,51,0	0/0:24,0:24:57.09:0,57,692	1/1:2,21:23:19:865,19,0	1/1:5,19:24:45.15:753,45,0	0/0:20,0:20:57.17:0,57,714	0/0:23,0:23:60.16:0,60,725	1/1:4,30:34:81.28:1355,81,0	0/0:25,0:25:63.13:0,63,767	0/0:13,0:13:30.10:0,30,382	0/0:19,0:19:48.14:0,48,597	0/0:50,0:50:99:0,114,1423	0/0:21,0:21:60.14:0,60,731	1/1:4,13:18:0.94:564,1,0	1/1:3,22:26:45.15:753,45,0	0/0:21,0:21:54.14:0,54,660	1/1:5,22:27:66.23:1092,66,0	1/1:6,18:24:29.94:501,30,0	1/1:0,10:10:21.07:351,21,0
chr10	18474670	.	CGT	C	535.80	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.042;DP=813;FS=18.690;HRun=0;HaplotypeScore=110.0179;InbreedingCoeff=0.9896;MQ=59.18;MQ0=5;MQRankSum=1.276;QD=19.14;ReadPosRankSum=1.769;VQSLOD=2.1875;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,20:28:48.16:631,48,0	0/0:21,0:21:51.17:0,51,866	0/0:35,0:12:23.26:0,23,416	0/0:42,0:23:50.82:0,51,644	0/0:25,0:25:47.88:0,48,780	0/0:22,0:22:63.22:0,63,1073	0/0:30,0:30:81.25:0,81,1322	0/0:32,0:32:78.24:0,78,1279	0/0:39,0:39:99:0,99,1689	0/0:44,0:44:99:0,129,2111	0/0:27,0:27:45.15:0,45,770	0/0:25,0:25:72.25:0,72,1227	0/0:31,0:31:93.26:0,93,1471	0/0:20,0:20:57.19:0,57,956	0/0:44,0:44:99:0,123,2073	0/0:38,0:38:99:0,108,1816	0/0:20,0:20:48.16:0,48,822	0/0:21,0:20:57.17:0,57,936	0/0:16,0:16:39.13:0,39,655	0/0:37,0:37:99:0,105,1748	0/0:38,0:38:99:0,105,1787	0/0:31,0:31:72.25:0,72,1231	0/0:25,0:25:51.17:0,51,873	0/0:23,0:23:63.22:0,63,1054	0/0:23,0:23:54.18:0,54,925	0/0:29,0:29:84.29:0,84,1412	0/0:39,0:38:99:0,111,1882	0/0:8,0:8:18.06:0,18,308
chr10	18474870	.	GTGTATGTA	G	451.62	PASS	AC=6;AF=0.111;AN=54;BaseQRankSum=2.855;DP=669;FS=0.000;HRun=0;HaplotypeScore=202.3476;InbreedingCoeff=0.7523;MQ=54.03;MQ0=9;MQRankSum=-0.617;QD=7.65;ReadPosRankSum=-3.197;VQSLOD=2.1016;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:24:9.03:0,9,264	0/0:14,0:14:20.97:0,21,611	0/0:28,0:21:11.94:0,12,121	0/0:26,0:23:20.78:0,21,269	0/0:24,0:25:36.08:0,36,1012	0/0:14,0:21:5.99:0,6,50	0/0:25,0:24:16.55:0,17,181	1/1:21,7:28:19.87:247,20,0	0/0:23,0:23:21.06:0,21,741	0/0:30,0:30:69.23:0,69,2467	0/0:22,0:22:15.04:0,15,480	0/0:28,0:28:9:0,9,100	0/0:30,0:30:30:0,30,754	0/0:19,0:19:15.04:0,15,467	0/0:29,0:29:15.02:0,15,202	0/0:19,0:31:5.99:0,6,50	0/0:18,0:18:25.24:0,25,739	0/0:14,0:12:8.97:0,9,86	1/1:6,7:13:11.93:283,12,0	./.	1/1:18,0:18:5.99:49,6,0	0/0:23,0:23:12:0,12,115	0/0:26,0:26:33.07:0,33,946	0/0:6,0:6:6:0,6,149	0/0:20,0:20:14.97:0,15,198	0/0:34,0:34:75.26:0,75,2527	0/0:34,0:35:39.07:0,39,1278	0/0:27,0:26:42.07:0,42,1274
chr10	18477848	.	T	TG	7221.76	PASS	AB=0.727;AC=21;AF=0.375;AN=56;BaseQRankSum=19.834;DP=758;FS=52.882;HRun=0;HaplotypeScore=147.7168;InbreedingCoeff=-0.6000;MQ=80.92;MQ0=0;MQRankSum=-13.666;QD=13.01;ReadPosRankSum=2.825;VQSLOD=3.0668;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:13,17:30:99:627,0,235	0/1:8,7:15:99:286,0,211	0/0:25,0:25:75.16:0,75,960	0/0:35,0:35:99:0,102,1357	0/1:23,11:34:99:330,0,289	0/1:18,9:27:99:304,0,503	0/1:15,8:23:99:317,0,349	0/0:28,0:28:81.26:0,81,1103	0/0:23,0:23:69.20:0,69,930	0/1:24,16:40:99:629,0,762	0/1:18,9:27:99:310,0,353	0/1:14,6:20:99:179,0,358	0/1:20,7:27:99:250,0,497	0/1:18,10:28:99:396,0,325	0/1:26,11:37:99:446,0,635	0/1:22,10:32:99:378,0,730	0/1:12,14:26:99:491,0,238	0/1:5,8:13:99:330,0,170	0/0:30,0:30:90.29:0,90,1234	0/0:31,0:31:93.29:0,93,1279	0/0:31,0:31:90.30:0,90,1258	0/1:30,10:40:99:370,0,621	0/1:23,10:33:99:370,0,473	0/1:7,11:18:59.40:188,0,59	0/1:18,11:29:99:378,0,511	0/1:15,11:26:99:399,0,514	0/1:20,4:24:99:118,0,502	0/1:3,3:6:99:125,0,103
chr10	18479448	.	G	GCA	1730.26	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-7.451;DP=719;FS=7.269;HRun=0;HaplotypeScore=158.4999;InbreedingCoeff=0.7766;MQ=56.02;MQ0=11;MQRankSum=3.595;QD=31.46;ReadPosRankSum=1.352;VQSLOD=5.5518;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:18,37:54:50.98:1825,51,0	0/0:8,0:8:9.03:0,9,112	0/0:42,0:21:25.30:0,25,289	0/0:42,0:33:53.62:0,54,561	0/0:11,0:11:14.72:0,15,161	0/0:15,0:15:39.12:0,39,488	0/0:30,0:30:63.20:0,63,788	0/0:28,0:28:51.14:0,51,614	0/0:18,0:18:39.12:0,39,488	0/0:17,0:17:39.08:0,39,467	0/0:12,0:12:15.03:0,15,175	0/0:38,0:38:87.22:0,87,1058	0/0:17,0:17:36.09:0,36,424	0/0:32,0:32:22.88:0,23,372	0/0:23,0:23:24.08:0,24,300	0/0:14,0:15:29.93:0,30,351	0/0:31,0:31:33.10:0,33,411	0/0:31,0:31:75.24:0,75,938	0/0:24,0:24:47.93:0,48,552	0/0:24,0:24:45.07:0,45,563	0/0:73,0:73:99:0,144,1796	0/0:22,0:22:57.17:0,57,700	0/0:15,0:15:24:0,24,300	0/0:31,0:31:18.01:0,18,208	0/0:20,0:20:42.13:0,42,525	0/0:22,0:21:60.16:0,60,735	0/0:16,0:17:29.91:0,30,337	0/0:5,0:5:3.01:0,3,37
chr10	18479486	.	ACACACTCATGCGCACG	A	2885.42	PASS	AB=0.550;AC=19;AF=0.352;AN=54;BaseQRankSum=6.882;DP=708;FS=1.337;HRun=0;HaplotypeScore=316.6908;InbreedingCoeff=0.8024;MQ=53.92;MQ0=2;MQRankSum=-4.477;QD=16.39;ReadPosRankSum=-0.373;VQSLOD=1.8769;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:95.74:0,96,4685	1/1:3,9:12:5.93:82,6,0	0/0:31,0:27:63.12:0,63,1682	0/0:47,0:35:30.59:0,31,1822	0/1:2,15:17:0:1,0,0	0/0:24,0:24:22.99:0,23,1184	0/0:40,0:40:51.29:0,51,3135	0/0:40,0:39:99:0,102,2955	0/0:26,0:26:53.92:0,54,3320	1/1:3,15:18:29.64:887,30,0	0/1:2,15:17:0.03:1,0,0	0/0:36,0:36:31.98:0,32,1921	1/1:3,13:16:8.99:399,9,0	1/1:4,19:23:8.95:276,9,0	0/0:23,0:23:21.90:0,22,1405	0/0:18,0:18:23.35:0,23,1095	1/1:5,17:22:3.01:136,3,0	0/0:26,0:26:13.63:0,14,3340	0/0:19,0:18:42.09:0,42,909	0/0:17,0:17:6.73:0,7,122	0/0:73,0:73:69.08:0,69,2590	0/0:19,0:19:44.13:0,44,2210	0/1:3,7:10:0.01:1,0,0	./.	0/0:15,0:15:20.40:0,20,1064	1/1:5,11:16:29.54:752,30,0	1/1:3,15:18:9:331,9,0	1/1:0,7:7:6.02:197,6,0
chr10	18479495	.	TGCGCAC	T	817.58	PASS	AB=0.954;AC=14;AF=0.259;AN=54;BaseQRankSum=7.662;DP=677;FS=0.712;HRun=0;HaplotypeScore=229.6726;InbreedingCoeff=0.4017;MQ=54.06;MQ0=2;MQRankSum=-4.807;QD=5.21;ReadPosRankSum=2.708;VQSLOD=2.5844;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,111,3524	0/1:10,1:11:12.23:15,0,12	0/0:36,0:28:83.59:0,84,1983	0/0:52,0:36:61.58:0,62,1956	0/1:16,0:16:0:0,0,0	0/0:23,0:23:23.22:0,23,737	0/0:41,0:41:68.03:0,68,2075	0/0:36,0:36:99:0,102,3079	0/0:27,0:27:63.09:0,63,2218	0/1:15,1:16:11.61:300,0,12	0/1:15,1:16:0:1,0,0	0/0:32,0:32:31.86:0,32,1068	1/1:14,0:14:8.99:157,9,0	0/1:21,0:21:3.85:57,0,4	0/0:24,0:24:23.04:0,23,789	0/0:21,0:21:23.26:0,23,685	1/1:19,0:19:3.01:43,3,0	0/0:26,0:26:47.75:0,48,2072	0/0:16,0:15:41.65:0,42,812	0/0:14,0:14:7.64:0,8,120	0/0:64,0:64:70.87:0,71,2341	0/0:18,0:18:44.68:0,45,1294	0/1:8,2:10:0:1,0,0	./.	0/0:17,0:17:20.76:0,21,611	1/1:12,0:12:6.46:273,6,0	0/1:15,0:15:10.58:77,0,11	0/1:7,0:7:11.68:37,0,12
chr10	18479512	.	G	GCA	853.35	PASS	AB=1.000;AC=10;AF=0.179;AN=56;BaseQRankSum=2.708;DP=683;FS=18.176;HRun=0;HaplotypeScore=202.3987;InbreedingCoeff=0.6090;MQ=50.60;MQ0=4;MQRankSum=-0.286;QD=6.67;ReadPosRankSum=-0.566;VQSLOD=1.6248;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,117,1503	0/0:11,0:11:2.97:0,3,39	0/0:47,0:30:63.26:0,63,747	0/0:48,0:29:40.73:0,41,542	0/0:17,0:17:2.84:0,3,39	0/0:20,0:20:17.93:0,18,237	0/0:42,0:42:40.83:0,41,525	1/1:17,0:17:30.51:399,31,0	0/0:25,0:25:60.06:0,60,788	0/1:20,0:20:20.18:20,0,305	0/0:21,0:21:12.04:0,12,157	0/0:32,0:32:26.99:0,27,355	0/1:16,0:16:1.03:1,0,128	0/0:23,0:23:17.87:0,18,201	0/0:25,0:25:15.06:0,15,232	0/0:24,0:24:12.30:0,12,158	0/0:24,0:24:27:0,27,301	0/0:20,0:20:53.53:0,54,639	1/1:9,0:8:14.13:97,14,0	1/1:9,2:11:3:51,3,0	1/1:49,6:55:35.24:437,35,0	0/0:17,0:17:24.08:0,24,315	0/0:11,0:11:2.84:0,3,39	0/0:39,0:39:15.04:0,15,195	0/0:17,0:17:15.03:0,15,178	0/0:16,0:16:23.61:0,24,249	0/0:15,0:15:8.98:0,9,83	0/0:9,0:9:11.74:0,12,99
chr10	18479518	.	A	ACT	285.51	PASS	AB=0.989;AC=8;AF=0.143;AN=56;BaseQRankSum=4.535;DP=675;FS=8.753;HRun=0;HaplotypeScore=204.9006;InbreedingCoeff=0.2667;MQ=48.03;MQ0=5;MQRankSum=0.870;QD=2.42;ReadPosRankSum=-1.188;VQSLOD=1.6347;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,117,1781	0/0:9,1:10:3.01:0,3,46	0/0:51,0:27:72.63:0,73,1003	0/0:46,0:24:56.86:0,57,739	0/0:19,0:19:11.99:0,12,119	0/0:22,0:22:18.04:0,18,275	0/0:41,0:41:47.30:0,47,646	1/1:13,0:13:4.78:176,5,0	0/0:24,0:24:63.19:0,63,941	0/1:20,1:21:58.23:58,0,427	0/0:18,1:19:15.02:0,15,206	0/0:35,0:35:26.92:0,27,413	0/1:17,0:17:12.83:13,0,239	0/0:23,0:23:17.64:0,18,217	0/0:27,0:27:18.53:0,19,297	0/0:23,0:23:12.07:0,12,184	0/0:24,0:24:33.06:0,33,439	0/0:21,0:21:47.80:0,48,760	0/1:7,0:6:6.77:7,0,18	1/1:11,0:11:2.18:31,2,0	0/1:46,0:49:4.66:126,0,5	0/0:17,0:17:24.08:0,24,367	0/0:9,2:11:3.01:0,3,46	0/0:38,0:38:15.05:0,15,229	0/0:18,0:18:15.05:0,15,226	0/0:14,0:14:29.84:0,30,399	0/0:17,0:17:15.02:0,15,171	0/0:9,0:9:4.55:0,5,127
chr10	18479520	.	ATG	A	884.87	PASS	AB=0.873;AC=10;AF=0.179;AN=56;BaseQRankSum=5.111;DP=667;FS=17.416;HRun=0;HaplotypeScore=201.6978;InbreedingCoeff=0.5794;MQ=48.04;MQ0=5;MQRankSum=-1.887;QD=6.41;ReadPosRankSum=-3.838;VQSLOD=0.9073;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,129,2476	0/0:10,0:10:2.70:0,3,60	0/0:50,1:26:67.27:0,67,1218	0/0:44,1:23:49.38:0,49,810	0/0:19,0:19:11.61:0,12,216	0/0:23,0:23:17.46:0,17,351	0/1:32,8:40:98.76:99,0,722	1/1:0,0:11:30.36:317,30,0	0/0:25,0:25:66.06:0,66,1242	0/0:21,0:21:29.09:0,29,640	0/0:19,0:19:17.65:0,18,351	0/0:34,1:35:13.53:0,14,449	0/0:17,0:17:5.06:0,5,335	0/0:23,0:23:23.67:0,24,401	0/0:25,0:25:5.83:0,6,325	0/0:23,0:23:10.70:0,11,217	0/0:22,0:22:36.12:0,36,658	0/1:19,2:21:99:119,0,798	1/1:2,5:6:17.90:167,18,0	1/1:2,8:10:2.95:20,3,0	1/1:33,16:48:34.17:322,34,0	0/0:15,1:16:23.62:0,24,469	0/0:12,0:12:5.76:0,6,111	0/0:37,0:37:14.95:0,15,305	0/0:18,0:18:14.90:0,15,236	0/0:14,0:14:29.58:0,30,498	0/0:18,0:18:24.08:0,24,382	0/0:6,0:6:11.53:0,12,192
chr10	18479525	.	CACACTCAT	C	237.29	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=4.681;DP=671;FS=6.275;HRun=0;HaplotypeScore=244.8212;InbreedingCoeff=0.6825;MQ=49.63;MQ0=6;MQRankSum=-1.348;QD=4.16;ReadPosRankSum=-2.381;VQSLOD=1.6618;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,126,4747	0/0:10,0:10:3.01:0,3,109	0/0:52,0:25:62.48:0,62,1838	0/0:46,0:23:55.25:0,55,1440	0/0:20,0:20:15.05:0,15,563	0/0:25,0:25:20.91:0,21,470	0/0:39,0:39:44.96:0,45,1534	0/0:11,0:11:6.56:0,7,35	0/0:23,0:23:63.20:0,63,2430	0/0:20,0:20:39.90:0,40,1306	0/0:21,0:21:23.91:0,24,912	0/0:35,0:35:31.49:0,31,902	0/0:17,0:17:21.54:0,22,708	0/0:25,0:25:30.10:0,30,869	0/0:25,0:25:22.94:0,23,531	0/0:25,0:25:4.89:0,5,368	0/0:26,0:26:48.16:0,48,1693	0/0:20,0:20:60.01:0,60,1401	1/1:2,4:6:11.31:297,11,0	1/1:3,7:10:2.92:18,3,0	1/1:25,16:40:3.03:36,3,0	0/0:17,0:17:23.78:0,24,630	0/0:14,0:14:11.90:0,12,376	0/0:39,0:39:14.92:0,15,684	0/0:17,0:17:12.01:0,12,254	0/0:14,0:14:29.72:0,30,974	0/0:18,0:18:24.08:0,24,705	0/0:6,0:6:12.04:0,12,384
chr10	18479538	.	G	GCA	1059.65	PASS	AB=0.909;AC=15;AF=0.278;AN=54;BaseQRankSum=2.340;DP=621;FS=4.522;HRun=0;HaplotypeScore=183.3623;InbreedingCoeff=0.5599;MQ=49.21;MQ0=7;MQRankSum=-2.485;QD=5.19;ReadPosRankSum=-2.097;VQSLOD=2.8127;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:86.61:0,87,755	0/0:9,0:9:2.97:0,3,20	0/0:45,0:22:41.18:0,41,451	0/0:43,0:20:29.18:0,29,484	0/0:21,0:21:17.71:0,18,128	1/1:13,9:22:8.39:141,8,0	0/1:21,11:32:47.97:150,0,48	./.	0/0:25,0:25:69.07:0,69,886	0/0:20,0:20:39.98:0,40,264	0/0:20,0:20:26.84:0,27,202	1/1:29,6:35:17.25:241,17,0	0/0:18,0:18:26.87:0,27,207	0/0:27,0:27:35.54:0,36,253	1/1:15,7:22:11.57:153,12,0	0/0:17,6:23:0.27:0,0,1	0/0:27,0:27:51.16:0,51,374	0/1:12,4:16:4.66:401,0,5	0/0:5,0:5:10.35:0,10,81	0/1:7,0:7:0:0,0,0	0/1:25,0:24:0.03:0,0,0	1/1:11,6:17:5.52:101,6,0	0/1:12,0:12:7.06:7,0,88	0/0:38,0:38:20.85:0,21,149	1/1:12,4:16:2.97:20,3,0	0/0:13,0:13:32.72:0,33,250	0/0:20,0:20:11.84:0,12,220	0/0:8,0:8:11.93:0,12,93
chr10	18479542	.	ACACTCTCATG	A	1849.19	PASS	AB=0.908;AC=16;AF=0.296;AN=54;BaseQRankSum=2.542;DP=618;FS=10.034;HRun=0;HaplotypeScore=225.4990;InbreedingCoeff=0.6154;MQ=49.22;MQ0=8;MQRankSum=-4.029;QD=8.81;ReadPosRankSum=-3.246;VQSLOD=1.0003;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,114,5477	0/0:8,0:8:2.44:0,2,20	0/0:46,0:22:51:0,51,1456	0/0:45,0:18:35.01:0,35,1248	0/0:22,0:22:23.57:0,24,1039	1/1:10,12:22:8.06:243,8,0	0/1:25,7:32:27.54:154,0,28	./.	0/0:24,0:24:68.97:0,69,2970	0/0:19,0:19:45.04:0,45,1739	0/0:21,0:21:32.74:0,33,1681	1/1:11,22:33:16.91:443,17,0	0/0:20,0:20:33.11:0,33,1549	0/0:25,0:25:41.32:0,41,1808	1/1:8,12:20:14.25:190,14,0	1/1:9,14:23:2.14:8,2,0	0/0:29,0:29:60.21:0,60,2956	0/1:13,4:17:50.64:777,0,51	0/0:5,0:5:15.05:0,15,244	0/1:7,0:7:0:1,0,0	0/1:25,0:24:0.28:3,0,0	1/1:8,7:15:6.04:148,6,0	0/0:14,0:14:23.81:0,24,1131	0/0:36,0:36:20.77:0,21,1090	1/1:6,10:16:3.48:46,3,0	0/0:14,0:14:42.04:0,42,1627	0/0:20,0:20:36.08:0,36,1471	0/0:8,0:8:14.97:0,15,499
chr10	18479552	.	GCA	G	33.58	PASS	AB=0.964;AC=6;AF=0.111;AN=54;BaseQRankSum=5.658;DP=664;FS=0.000;HRun=0;HaplotypeScore=185.5803;InbreedingCoeff=0.1472;MQ=47.77;MQ0=13;MQRankSum=-5.145;QD=0.31;ReadPosRankSum=-0.644;VQSLOD=2.5091;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,132,2263	0/0:7,0:7:3.01:0,3,51	0/0:51,1:17:43.24:0,43,640	0/0:53,0:16:35.76:0,36,589	0/0:21,0:21:33.11:0,33,566	0/1:20,0:20:2.78:3,0,46	0/0:28,0:28:9.01:0,9,132	./.	0/0:24,0:24:66.20:0,66,1090	0/0:22,0:22:48.15:0,48,798	0/0:18,0:18:33.11:0,33,552	0/1:37,0:37:10.82:11,0,35	0/0:19,0:19:39.13:0,39,664	0/0:27,0:27:54.16:0,54,896	0/0:26,0:26:6.18:0,6,48	1/1:20,0:20:0.87:2,1,0	0/0:33,0:34:75.21:0,75,1254	0/1:15,3:18:99:105,0,113	0/0:8,0:8:20.96:0,21,195	0/0:9,0:9:2.99:0,3,24	0/0:34,0:34:14.90:0,15,121	0/0:14,1:15:3.45:0,3,22	0/0:16,0:16:33.11:0,33,566	0/0:37,0:37:24.08:0,24,411	0/1:15,0:15:0.06:0,0,0	0/0:17,0:17:45.07:0,45,723	0/0:21,0:21:30.10:0,30,514	0/0:7,0:7:12.04:0,12,205
chr10	18479560	.	A	ACT	941.46	PASS	AB=0.923;AC=14;AF=0.259;AN=54;BaseQRankSum=7.940;DP=691;FS=19.472;HRun=0;HaplotypeScore=169.8421;InbreedingCoeff=0.5008;MQ=47.48;MQ0=17;MQRankSum=-4.779;QD=4.15;ReadPosRankSum=-4.318;VQSLOD=0.5706;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,135,2037	0/0:6,0:6:3.01:0,3,46	0/0:57,0:17:30.22:0,30,495	0/0:53,0:13:35.12:0,35,478	0/0:20,0:20:33.11:0,33,502	0/1:20,0:20:0.93:1,0,16	0/1:36,0:38:52.22:52,0,90	./.	0/0:24,0:24:59.58:0,60,932	0/0:22,0:22:51.16:0,51,742	0/0:23,0:23:44.81:0,45,603	1/1:35,0:35:12.90:105,13,0	0/0:20,0:20:42.12:0,42,615	0/0:28,0:28:14.51:0,15,782	1/1:26,0:26:5.59:59,6,0	0/1:17,0:17:0.14:1,0,0	0/0:35,0:35:81.16:0,81,1162	0/1:19,0:20:23.43:261,0,23	0/1:3,4:7:2.92:242,0,3	1/1:3,4:7:2.74:57,3,0	1/1:12,29:39:16.97:313,17,0	0/0:13,0:13:0.47:0,0,2	0/0:18,0:18:39.10:0,39,553	0/0:42,0:42:35.90:0,36,458	0/1:15,0:15:0.13:0,0,0	0/0:20,0:19:54.02:0,54,710	0/0:18,0:18:33.09:0,33,480	0/0:7,0:7:12.04:0,12,175
chr10	18479574	.	A	ACT	1492.32	PASS	AB=0.551;AC=14;AF=0.250;AN=56;BaseQRankSum=1.468;DP=699;FS=1.304;HRun=0;HaplotypeScore=140.8775;InbreedingCoeff=0.6734;MQ=47.63;MQ0=20;MQRankSum=-2.493;QD=8.11;ReadPosRankSum=-3.725;VQSLOD=2.5675;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,132,1804	0/0:3,0:3:3.01:0,3,43	0/0:53,0:12:26.28:0,26,399	0/0:48,0:8:16.02:0,16,247	0/0:17,0:17:36.07:0,36,474	1/1:4,13:17:14.90:213,15,0	1/1:12,26:39:25.93:393,26,0	0/0:12,0:12:30.01:0,30,313	0/0:24,0:24:53.51:0,54,741	0/0:18,0:18:42.14:0,42,601	0/0:21,0:21:47.86:0,48,685	1/1:1,32:33:3.88:222,4,0	0/0:21,0:21:48.10:0,48,614	0/0:24,1:25:5.37:0,5,758	1/1:0,25:26:12.53:182,13,0	0/1:2,18:20:5.16:51,0,5	0/0:37,0:37:89.94:0,90,1192	0/1:5,14:19:49.71:497,0,50	0/0:8,0:8:24:0,24,270	0/0:8,0:8:12:0,12,116	0/0:53,0:50:44.90:0,45,532	1/1:3,9:12:6.01:79,6,0	0/0:20,0:20:45.12:0,45,602	0/0:43,0:43:44.98:0,45,621	1/1:5,13:18:2.92:26,3,0	0/0:20,0:19:54.16:0,54,737	0/0:21,0:21:45.04:0,45,564	0/0:7,0:7:9.03:0,9,129
chr10	18479610	.	GCA	G	772	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=2.648;DP=748;FS=2.517;HRun=0;HaplotypeScore=164.4618;InbreedingCoeff=0.4197;MQ=49.16;MQ0=21;MQRankSum=1.795;QD=13.79;ReadPosRankSum=0.987;VQSLOD=3.6292;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,21:33:66.21:849,66,0	0/0:1,0:1:3.01:0,3,51	0/0:55,0:10:20.90:0,21,300	0/0:50,0:5:11.90:0,12,181	0/0:17,0:16:39.11:0,39,621	0/0:24,0:24:22.43:0,22,374	0/0:43,1:44:69.69:0,70,1166	0/0:32,1:32:39.63:0,40,1181	0/0:31,1:31:27.65:0,28,1045	0/0:19,0:19:48.16:0,48,799	0/0:15,0:15:27.09:0,27,450	0/0:35,0:35:20.62:0,21,350	0/0:18,0:18:39.44:0,39,622	0/0:25,0:25:51.17:0,51,857	0/0:28,0:27:17.77:0,18,275	0/0:18,0:18:16.88:0,17,271	0/0:38,0:38:81.62:0,82,1247	0/1:23,0:23:28.22:28,0,600	0/0:23,0:19:36.12:0,36,602	0/0:12,0:12:18.06:0,18,304	0/0:79,0:76:99:0,117,1927	0/0:10,0:10:3.01:0,3,51	0/0:18,1:19:9.55:0,10,701	0/0:33,1:34:36.10:0,36,607	0/0:14,0:14:5.96:0,6,101	0/0:22,0:22:51.17:0,51,860	0/0:21,0:21:42.14:0,42,708	0/0:5,0:5:6.02:0,6,87
chr10	18479639	.	TAC	T	387.66	PASS	AB=0.990;AC=12;AF=0.240;AN=50;BaseQRankSum=1.008;DP=673;FS=1.754;HRun=0;HaplotypeScore=146.6679;InbreedingCoeff=0.0940;MQ=47.59;MQ0=26;MQRankSum=-0.124;QD=1.26;ReadPosRankSum=2.739;VQSLOD=2.5594;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:44:20.44:0,20,183	0/0:5,0:5:2.80:0,3,7	./.	./.	0/0:13,0:16:5.49:0,5,24	1/1:23,0:23:3.68:16,4,0	0/1:36,0:36:16.35:16,0,28	0/1:28,0:24:7.79:8,0,98	1/1:22,8:30:20.14:297,20,0	0/0:21,0:20:13.47:0,13,167	0/0:10,0:10:5.98:0,6,48	0/1:29,0:29:2.24:30,0,2	0/0:17,0:18:6.62:0,7,36	0/0:25,0:26:10.14:0,10,153	0/1:20,0:20:2.22:9,0,2	0/1:18,0:18:16.78:19,0,17	0/0:30,0:32:22.97:0,23,164	0/1:20,0:19:8.19:8,0,11	0/1:22,1:20:20.81:21,0,117	0/0:13,0:13:9.03:0,9,132	0/1:76,3:77:99:99,0,351	./.	0/0:15,0:14:2.53:0,3,23	0/0:28,0:28:7.58:0,8,47	0/0:19,0:19:0:0,0,0	0/0:25,0:24:27.70:0,28,202	0/0:12,0:15:4.24:0,4,27	0/0:4,0:3:3:0,3,26
chr10	18479670	.	ACACACACACACT	A	1330.15	PASS	AB=0.964;AC=11;AF=0.196;AN=56;BaseQRankSum=7.160;DP=689;FS=0.000;HRun=0;HaplotypeScore=223.7822;InbreedingCoeff=0.5467;MQ=50.86;MQ0=13;MQRankSum=-1.650;QD=7.19;ReadPosRankSum=-0.217;VQSLOD=2.4625;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:44:84.07:0,84,1803	0/0:4,0:4:12.03:0,12,283	0/0:28,0:12:36.03:0,36,419	0/0:37,0:20:13.60:0,14,475	0/0:18,0:18:27.03:0,27,368	0/1:26,1:27:17.54:52,0,18	1/1:34,0:34:21.45:314,21,0	0/0:29,0:26:72.15:0,72,1323	0/0:33,0:32:69.67:0,70,2000	0/0:26,0:26:69.58:0,70,1600	0/0:9,0:9:9.03:0,9,272	1/1:31,1:32:23.91:460,24,0	0/0:17,0:17:40.27:0,40,568	0/0:30,0:30:56.90:0,57,990	1/1:22,2:24:23.80:248,24,0	0/1:24,2:26:32.96:120,0,33	0/0:26,0:24:51.85:0,52,1063	0/1:20,0:19:68.71:282,0,69	0/0:19,0:18:52.89:0,53,1186	0/0:12,0:12:27.05:0,27,792	0/0:83,0:80:99:0,169,4836	0/0:10,0:10:2.59:0,3,33	0/0:14,0:13:30:0,30,450	0/0:24,0:24:21.23:0,21,440	1/1:22,0:22:2.76:17,3,0	0/0:20,0:20:55.96:0,56,1478	0/0:15,0:15:30.49:0,30,549	0/0:4,0:3:6:0,6,131
chr10	18479672	.	ACACACACACT	A	2478.38	PASS	AB=0.955;AC=13;AF=0.232;AN=56;BaseQRankSum=6.179;DP=679;FS=1.002;HRun=0;HaplotypeScore=201.0503;InbreedingCoeff=0.7446;MQ=53.27;MQ0=13;MQRankSum=-1.418;QD=14.49;ReadPosRankSum=-0.528;VQSLOD=2.3924;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:46:90.03:0,90,1619	0/0:4,0:4:12.03:0,12,228	0/0:28,0:13:38.99:0,39,410	0/0:39,0:22:19.59:0,20,519	0/0:17,0:17:26.99:0,27,295	1/1:3,18:21:3.48:104,3,0	1/1:29,3:32:47.86:665,48,0	0/0:30,0:27:75.15:0,75,1219	0/0:32,0:31:69.61:0,70,1537	0/0:25,0:25:69.58:0,70,1441	0/0:10,0:10:9.03:0,9,258	1/1:24,7:31:34.74:731,35,0	0/0:17,0:17:36.76:0,37,441	0/0:31,0:31:59.79:0,60,888	1/1:20,2:22:26.96:331,27,0	1/1:3,22:25:8.12:268,8,0	0/0:26,0:24:51.44:0,51,939	0/1:20,1:21:34.20:533,0,34	0/0:20,0:19:52.64:0,53,990	0/0:12,0:12:27.05:0,27,730	0/0:84,0:81:99:0,169,4104	0/0:1,8:9:2.95:0,3,22	0/0:14,0:13:30.04:0,30,409	0/0:23,0:23:18.75:0,19,371	1/1:0,19:19:2.48:17,2,0	0/0:20,0:20:55.61:0,56,1256	0/0:15,0:15:30.47:0,30,478	0/0:4,0:3:6:0,6,113
chr10	18480557	.	T	TCTCA	42916.80	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-8.566;DP=746;FS=0.487;HRun=0;HaplotypeScore=102.4736;InbreedingCoeff=0.9890;MQ=78.08;MQ0=0;MQRankSum=-9.123;QD=63.39;ReadPosRankSum=3.414;VQSLOD=6.8975;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,44:53:99:2874,108,0	1/1:1,11:12:33.11:890,33,0	0/0:24,0:24:66.20:0,66,1183	0/0:17,0:17:48.13:0,48,852	1/1:4,24:29:69.24:1839,69,0	1/1:1,23:25:63.22:1698,63,0	1/1:0,26:30:66.23:1777,66,0	1/1:5,24:33:93.29:2311,93,0	0/0:28,0:28:75.25:0,75,1392	1/1:1,24:27:78.24:1910,78,0	1/1:2,16:20:36.12:968,36,0	1/1:1,25:29:66.23:1779,66,0	1/1:1,19:21:57.20:1536,57,0	1/1:4,19:24:57.20:1527,57,0	1/1:3,23:27:66.23:1780,66,0	1/1:1,25:28:69.24:1860,69,0	1/1:3,38:42:99:2787,105,0	1/1:1,25:30:69.24:1856,69,0	1/1:4,20:29:78.25:1862,78,0	1/1:3,20:24:63.22:1695,63,0	1/1:2,31:34:75.26:2024,75,0	1/1:2,14:17:42.14:1123,42,0	1/1:2,22:26:66:1764,66,0	1/1:2,30:33:69.24:1860,69,0	1/1:3,20:24:48.16:1293,48,0	1/1:1,24:25:75.24:1889,75,0	1/1:2,23:26:63.22:1692,63,0	1/1:1,6:9:12.04:323,12,0
chr10	18481624	.	AC	A	9590.68	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=15.522;DP=799;FS=0.000;HRun=7;HaplotypeScore=80.9479;InbreedingCoeff=0.9999;MQ=81.54;MQ0=0;MQRankSum=-1.642;QD=25.58;ReadPosRankSum=3.594;VQSLOD=5.3560;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,45:50:99:1223,120,0	1/1:2,10:12:30.07:306,30,0	0/0:23,0:23:45.72:0,46,532	0/0:27,0:26:39.74:0,40,492	1/1:6,22:28:54.11:549,54,0	0/0:19,0:19:54.17:0,54,678	0/0:32,0:32:87.28:0,87,1094	0/0:22,0:22:54.15:0,54,654	0/0:29,0:29:81.24:0,81,1004	1/1:4,26:30:78.17:794,78,0	1/1:1,23:24:63.11:633,63,0	0/0:42,0:42:99:0,120,1472	1/1:1,19:20:51.11:518,51,0	1/1:1,33:34:90.20:917,90,0	0/0:31,0:31:87.28:0,87,1094	0/0:33,0:33:90.26:0,90,1106	1/1:1,37:38:99:1101,108,0	0/0:23,0:23:63.20:0,63,793	0/0:25,0:24:63.18:0,63,777	0/0:31,0:31:78.25:0,78,979	0/0:35,0:35:99:0,99,1243	0/0:25,0:25:69.21:0,69,847	1/1:2,24:26:66.15:673,66,0	1/1:3,35:38:84.19:857,84,0	0/0:27,0:27:78.25:0,78,973	1/1:0,27:27:81.18:826,81,0	1/1:3,31:34:84.19:857,84,0	1/1:0,14:14:33.08:337,33,0
chr10	18482054	.	C	CAGAGTAGT	3517.07	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-4.003;DP=795;FS=7.582;HRun=0;HaplotypeScore=208.7415;InbreedingCoeff=0.9990;MQ=94.85;MQ0=0;MQRankSum=-8.117;QD=73.27;ReadPosRankSum=1.669;VQSLOD=2.6106;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,26:48:78.27:3517,78,0	0/0:10,0:10:27.09:0,27,790	0/0:42,0:42:99:0,111,2806	0/0:37,0:36:99:0,99,2664	0/0:30,0:30:81.28:0,81,2367	0/0:20,0:20:57.17:0,57,1562	0/0:25,0:25:75.23:0,75,2036	0/0:22,0:22:66.21:0,66,1810	0/0:32,0:32:96.33:0,96,2800	0/0:32,0:32:87.29:0,87,2441	0/0:18,0:18:54.19:0,54,1536	0/0:25,0:25:72.25:0,72,2103	0/0:26,0:26:78.25:0,78,2182	0/0:26,0:26:75.24:0,75,2134	0/0:41,0:41:99:0,123,3536	0/0:30,0:30:90.31:0,90,2600	0/0:31,0:31:93.30:0,93,2660	0/0:34,0:34:99:0,102,2785	0/0:26,0:26:78.25:0,78,2091	0/0:15,0:15:45.15:0,45,1278	0/0:51,0:51:99:0,154,4403	0/0:25,0:25:75.22:0,75,1922	0/0:20,0:20:60.21:0,60,1737	0/0:29,0:29:87.30:0,87,2510	0/0:19,0:19:54.19:0,54,1582	0/0:34,0:34:99:0,102,2936	0/0:29,0:29:84.25:0,84,2292	0/0:18,0:18:54.19:0,54,1582
chr10	18483177	.	CAG	C	669.68	PASS	AB=0.910;AC=18;AF=0.333;AN=54;BaseQRankSum=-0.182;DP=706;FS=6.757;HRun=0;HaplotypeScore=131.8448;InbreedingCoeff=0.2963;MQ=58.01;MQ0=29;MQRankSum=0.423;QD=2.46;ReadPosRankSum=1.499;VQSLOD=1.5772;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:22:2.99:0,3,23	0/0:15,0:16:7.58:0,8,36	0/0:33,0:12:2.37:0,2,8	./.	0/1:25,3:28:32.37:76,0,32	0/0:30,0:30:7.46:0,7,45	0/0:34,0:32:14.69:0,15,140	0/0:32,0:31:25.42:0,25,151	0/1:16,8:24:9.53:70,0,10	0/1:24,3:25:72.32:79,0,72	0/1:18,1:20:0:0,0,0	0/0:22,0:22:4.07:0,4,16	1/1:14,1:15:6.95:59,7,0	1/1:22,2:24:6.90:68,7,0	0/0:26,0:26:20.28:0,20,158	0/1:28,0:29:18.68:19,0,131	1/1:10,0:10:8.22:63,8,0	0/0:16,0:16:4.33:0,4,83	0/0:18,0:16:8.90:0,9,58	0/0:25,0:23:3:0,3,25	0/0:16,0:15:3:0,3,25	0/0:33,0:33:8.94:0,9,67	0/1:24,0:23:16.05:16,0,38	1/1:22,1:24:3.01:33,3,0	0/0:25,1:23:20.28:0,20,157	0/0:28,0:27:31.45:0,31,290	1/1:24,3:27:6.46:247,6,0	1/1:16,3:18:7.71:98,8,0
chr10	18483191	.	GAGAGAGAGAGAGAGAGAGAGAGAGACAGAGACAGAGAC	G	373.50	PASS	AB=0.978;AC=12;AF=0.214;AN=56;BaseQRankSum=-0.250;DP=645;FS=0.000;HRun=0;HaplotypeScore=417.9856;InbreedingCoeff=-0.1496;MQ=46.84;MQ0=35;MQRankSum=-2.665;QD=1.56;ReadPosRankSum=-6.133;VQSLOD=0.1080;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:22:6.02:0,6,96	0/0:13,0:13:11.99:0,12,126	1/1:16,0:4:0.89:2,1,0	0/0:29,0:8:10.55:0,11,120	0/0:24,0:23:6.94:0,7,113	0/1:31,0:31:31.88:32,0,35	0/1:34,0:31:9.50:10,0,388	0/1:25,0:23:37.05:37,0,84	0/0:27,0:26:21.48:0,21,671	0/0:27,0:24:39.94:0,40,931	0/0:19,0:18:0:0,0,0	0/1:19,0:18:20.52:21,0,112	0/1:21,0:21:81.74:82,0,288	0/0:23,0:23:7.82:0,8,134	0/0:21,0:21:22.75:0,23,383	0/0:32,0:32:21.42:0,21,459	0/1:11,0:11:20.13:20,0,81	0/1:13,0:13:41.01:41,0,198	0/1:15,6:17:39.06:253,0,39	0/0:23,0:20:5.94:0,6,43	0/1:20,0:17:2.44:2,0,23	0/1:28,0:28:6.98:7,0,106	0/0:21,0:20:6.02:0,6,118	0/0:26,0:26:2.90:0,3,42	0/0:23,0:20:21.36:0,21,411	0/0:28,0:27:48.19:0,48,1257	0/0:20,0:20:32.44:0,32,820	0/0:24,0:21:20.19:0,20,1051
chr10	18483229	.	CAG	C	240.28	PASS	AB=1.000;AC=15;AF=0.300;AN=50;BaseQRankSum=7.388;DP=516;FS=3.414;HRun=0;HaplotypeScore=134.8582;InbreedingCoeff=0.3291;MQ=42.83;MQ0=28;MQRankSum=-3.358;QD=1.19;ReadPosRankSum=-7.972;VQSLOD=0.3027;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:10,11:19:12.04:142,12,0	0/1:11,0:11:1.24:1,0,18	0/0:15,0:1:0:0,0,0	0/0:32,0:6:3.79:0,4,38	0/0:18,0:17:5.04:0,5,69	1/1:22,0:22:20.27:67,20,0	0/1:28,0:25:8.37:8,0,18	0/0:16,0:12:16.80:0,17,131	0/0:17,0:16:27.09:0,27,403	0/0:18,0:17:13.44:0,13,105	./.	0/1:19,0:17:24.80:25,0,38	0/0:19,0:19:6.99:0,7,28	0/0:19,0:19:5.86:0,6,45	1/1:15,0:15:14.23:48,14,0	0/1:25,0:25:12.81:13,0,126	./.	0/1:13,0:13:1.26:1,0,104	0/0:13,0:8:2.51:0,3,7	0/0:16,0:13:3:0,3,25	0/0:23,0:20:9.29:0,9,76	1/1:13,0:13:13.98:43,14,0	0/1:17,0:16:0.02:0,0,0	./.	0/1:18,0:17:7.37:40,0,7	0/0:20,0:18:13.56:0,14,111	0/0:27,0:26:7.50:0,8,31	0/0:16,0:13:13.27:0,13,91
chr10	18483235	.	G	GAAACAC	4687.94	PASS	AB=0.583;AC=15;AF=0.278;AN=54;BaseQRankSum=6.051;DP=555;FS=2.354;HRun=0;HaplotypeScore=143.4849;InbreedingCoeff=0.7518;MQ=43.55;MQ0=29;MQRankSum=-7.945;QD=26.79;ReadPosRankSum=-8.532;VQSLOD=2.3229;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:19:15.38:0,15,233	0/0:11,0:11:26.50:0,26,363	0/0:18,0:2:0:0,0,0	0/0:35,0:6:5:0,5,99	0/0:19,0:18:16.75:0,17,254	1/1:5,19:26:34:591,34,0	1/1:4,26:30:27.09:606,27,0	0/0:22,0:17:54.14:0,54,758	0/0:16,0:15:32.96:0,33,741	0/0:16,0:15:45.14:0,45,758	./.	1/1:6,15:22:33.11:622,33,0	0/0:19,0:19:36.05:0,36,467	0/0:20,0:20:24.91:0,25,402	1/1:5,12:18:27.43:461,27,0	1/1:4,23:27:39:795,39,0	0/0:8,0:8:3.01:0,3,48	0/1:4,9:14:84.99:379,0,85	0/0:16,0:9:14.63:0,15,165	0/0:15,0:13:3.01:0,3,71	0/0:23,0:20:29.72:0,30,485	1/1:3,12:15:24.97:433,25,0	0/0:18,0:17:1.82:0,2,23	0/0:23,0:23:6:0,6,71	1/1:9,9:17:50.85:801,51,0	0/0:20,0:18:54.18:0,54,926	0/0:29,0:28:69.13:0,69,1046	0/0:17,0:13:23.97:0,24,277
chr10	18484927	.	A	AAT	15937.40	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-7.376;DP=485;FS=0.755;HRun=0;HaplotypeScore=52.0172;InbreedingCoeff=0.9118;MQ=73.66;MQ0=0;MQRankSum=-0.583;QD=36.47;ReadPosRankSum=4.851;VQSLOD=6.7465;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,29:38:57.05:1078,57,0	1/1:0,11:11:27.09:455,27,0	0/0:14,0:11:17.89:0,18,165	0/0:18,0:14:11.30:0,11,123	1/1:2,25:27:66.23:1101,66,0	1/1:3,21:24:51.17:860,51,0	1/1:4,11:15:27.09:456,27,0	1/1:6,30:36:90.29:1449,90,0	0/0:16,0:16:42.09:0,42,495	1/1:1,15:16:45.15:751,45,0	1/1:2,12:14:30.10:492,30,0	1/1:3,11:15:30.10:506,30,0	1/1:0,5:6:15.04:228,15,0	1/1:0,7:7:18.06:304,18,0	1/1:1,9:10:21.07:354,21,0	1/1:2,9:11:21.07:354,21,0	1/1:3,16:19:39.13:658,39,0	1/1:3,23:26:66.23:1099,66,0	1/1:7,14:21:42.14:705,42,0	1/1:2,13:15:30.10:480,30,0	1/1:0,5:5:12.04:203,12,0	1/1:1,4:5:9.03:137,9,0	1/1:1,5:7:12.04:202,12,0	1/1:2,6:8:9.03:152,9,0	1/1:2,19:21:51.17:861,51,0	1/1:2,22:24:27.59:977,28,0	1/1:5,23:28:54.18:911,54,0	1/1:1,26:27:69.24:1164,69,0
chr10	18487211	.	T	TTCTATCTA	7284.58	PASS	AC=52;AF=1.000;AN=52;BaseQRankSum=-4.772;DP=515;FS=3.849;HRun=0;HaplotypeScore=144.5663;InbreedingCoeff=-0.0542;MQ=64.33;MQ0=6;MQRankSum=2.500;QD=14.93;ReadPosRankSum=4.038;VQSLOD=3.3309;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:39:36.10:414,36,0	1/1:8,3:11:18.06:365,18,0	./.	./.	1/1:17,5:21:15.05:249,15,0	1/1:18,0:18:5.53:74,6,0	1/1:11,0:11:6.02:105,6,0	1/1:46,0:46:11.93:101,12,0	1/1:10,2:13:9.03:233,9,0	1/1:17,0:17:27.02:471,27,0	1/1:12,0:12:5.70:48,6,0	1/1:15,0:15:8.38:148,8,0	1/1:16,0:15:2.13:76,2,0	1/1:7,9:14:9.03:225,9,0	1/1:10,5:16:5.10:176,5,0	1/1:12,0:12:12.04:213,12,0	1/1:18,2:20:17.31:485,17,0	1/1:25,1:26:36.09:926,36,0	1/1:12,5:16:19.88:674,20,0	1/1:25,0:25:10.76:197,11,0	1/1:10,0:22:17.96:146,18,0	1/1:10,0:10:3.48:50,3,0	1/1:8,4:13:3.01:54,3,0	1/1:8,1:9:12.04:239,12,0	1/1:23,0:23:13.59:214,14,0	1/1:13,1:14:18.02:483,18,0	1/1:18,0:18:15.05:256,15,0	1/1:25,2:26:36.11:662,36,0
chr10	18487259	.	ATTTG	A	2297.50	PASS	AB=0.982;AC=27;AF=0.482;AN=56;BaseQRankSum=4.032;DP=497;FS=10.536;HRun=0;HaplotypeScore=137.3662;InbreedingCoeff=-0.7397;MQ=54.87;MQ0=10;MQRankSum=-5.262;QD=5.29;ReadPosRankSum=-3.797;VQSLOD=0.5883;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:30,3:33:84.40:84,0,999	0/1:13,0:13:99:157,0,337	1/1:19,0:5:0.26:1,0,0	0/1:11,0:6:1.36:1,0,54	0/1:19,0:18:90.22:90,0,466	0/1:18,1:19:99:141,0,633	0/1:8,0:7:30.25:30,0,250	0/0:46,0:43:99:0,113,1906	0/1:15,0:15:1.49:1,0,494	0/1:22,1:23:99:193,0,768	0/1:19,0:19:57.75:58,0,678	0/1:14,0:14:74.23:74,0,364	0/1:12,0:11:41.56:42,0,291	0/1:12,0:10:66.17:66,0,88	0/1:13,0:13:3.84:4,0,426	0/1:11,0:11:99:103,0,333	0/1:16,0:16:99:139,0,188	0/1:24,0:24:99:224,0,578	0/1:17,0:16:31.70:32,0,434	0/1:25,0:25:99:151,0,773	0/0:17,0:17:33.11:0,33,594	0/1:5,3:8:19.78:20,0,241	0/1:14,0:14:6.73:7,0,368	0/1:8,0:8:86.86:87,0,162	0/1:26,0:26:99:260,0,506	0/1:15,0:15:99:162,0,455	0/1:11,0:11:57.30:57,0,383	0/1:29,0:29:99:258,0,906
chr10	18487316	.	GTATC	G	7509.57	PASS	AB=0.552;AC=23;AF=0.411;AN=56;BaseQRankSum=8.827;DP=441;FS=11.356;HRun=0;HaplotypeScore=115.2740;InbreedingCoeff=0.8916;MQ=60.39;MQ0=1;MQRankSum=-2.358;QD=38.91;ReadPosRankSum=3.418;VQSLOD=4.6781;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:22:54.19:0,54,1315	1/1:1,7:8:18.06:320,18,0	0/0:13,0:12:16.56:0,17,341	0/0:7,0:7:8.86:0,9,167	1/1:3,19:22:44.93:742,45,0	0/0:21,0:21:60.21:0,60,1490	0/0:11,0:11:24.08:0,24,577	0/0:35,0:35:77.77:0,78,1822	0/0:13,0:13:33.11:0,33,816	1/1:4,19:23:60.21:1066,60,0	1/1:4,18:22:36.02:639,36,0	0/0:14,0:14:36.12:0,36,928	1/1:2,10:12:27.09:480,27,0	1/1:0,12:12:36.12:640,36,0	0/0:16,0:16:45.15:0,45,1127	0/0:10,0:10:27.09:0,27,697	1/1:7,11:18:9.51:503,10,0	0/0:19,0:19:42.06:0,42,975	0/0:11,0:11:21.05:0,21,443	0/0:23,0:23:57.20:0,57,1398	0/0:5,0:5:15.03:0,15,323	0/0:4,0:4:12.04:0,12,310	1/1:1,15:16:39.03:692,39,0	1/1:2,4:6:9.03:160,9,0	0/0:23,0:23:63.21:0,63,1495	0/1:3,13:16:32.30:634,0,32	1/1:3,12:15:36.12:639,36,0	1/1:6,17:23:57.20:994,57,0
chr10	18487379	.	TAC	T	7290.28	PASS	AB=0.740;AC=40;AF=0.714;AN=56;BaseQRankSum=9.499;DP=311;FS=1.016;HRun=0;HaplotypeScore=61.0945;InbreedingCoeff=0.6195;MQ=80.27;MQ0=3;MQRankSum=-1.060;QD=34.39;ReadPosRankSum=5.415;VQSLOD=6.7354;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,18:19:48.16:779,48,0	1/1:0,1:1:3.01:48,3,0	0/1:5,1:6:7.50:7,0,51	0/0:17,0:17:14.06:0,14,244	1/1:0,17:17:27.09:437,27,0	1/1:0,25:24:42.14:683,42,0	1/1:0,5:5:12.04:195,12,0	0/0:47,0:47:99:0,141,2547	0/0:11,0:11:33.05:0,33,580	1/1:3,9:11:33.11:533,33,0	1/1:1,7:8:21.06:315,21,0	1/1:0,7:7:18.06:274,18,0	1/1:1,2:3:3.01:48,3,0	1/1:0,6:6:18.06:290,18,0	1/1:0,9:9:18.06:292,18,0	0/1:1,7:8:39.77:272,0,40	0/1:5,15:19:8.10:425,0,8	1/1:0,17:17:45.15:732,45,0	0/0:16,0:16:48.13:0,48,828	0/0:7,0:7:21.07:0,21,416	0/0:1,0:1:3.01:0,3,61	1/1:0,2:2:6.02:98,6,0	1/1:1,5:6:18.05:265,18,0	0/1:1,0:1:0:0,0,0	1/1:0,13:13:33.11:537,33,0	1/1:1,5:6:18.06:293,18,0	1/1:0,13:13:27.09:426,27,0	1/1:0,7:7:21.07:341,21,0
chr10	18488221	.	TA	T	567.18	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.627;DP=754;FS=4.439;HRun=3;HaplotypeScore=93.4558;InbreedingCoeff=0.9998;MQ=76.02;MQ0=0;MQRankSum=-2.805;QD=28.36;ReadPosRankSum=1.126;VQSLOD=2.8918;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,111,1640	0/0:15,0:15:45.14:0,45,654	0/0:20,0:20:60.19:0,60,826	0/0:29,0:29:61.95:0,62,871	0/0:25,0:25:72.20:0,72,1031	0/0:26,0:26:75.23:0,75,1084	0/0:32,0:32:93.27:0,93,1332	0/0:30,0:30:90.28:0,90,1298	0/0:28,0:28:84.27:0,84,1231	0/0:46,0:46:99:0,132,1978	0/0:21,0:21:57.17:0,57,815	0/0:25,0:25:72.22:0,72,1024	0/0:28,0:28:84.28:0,84,1240	0/0:23,0:23:69.22:0,69,1013	0/0:44,0:44:99:0,132,1938	0/0:40,0:40:99:0,117,1728	0/0:26,0:26:78.26:0,78,1169	1/1:0,20:20:51.17:662,51,0	0/0:24,0:24:69.21:0,69,984	0/0:25,0:25:75.24:0,75,1104	0/0:25,0:25:75.23:0,75,1082	0/0:25,0:25:72.20:0,72,1002	0/0:16,0:16:38.01:0,38,661	0/0:23,0:23:69.18:0,69,1007	0/0:20,0:20:60.19:0,60,880	0/0:39,0:39:99:0,114,1689	0/0:28,0:28:84.28:0,84,1246	0/0:13,0:13:39.13:0,39,584
chr10	18488936	.	GAC	G	2821.62	PASS	AB=0.925;AC=34;AF=0.654;AN=52;BaseQRankSum=-0.540;DP=649;FS=15.302;HRun=0;HaplotypeScore=107.4174;InbreedingCoeff=0.2809;MQ=34.70;MQ0=71;MQRankSum=-2.317;QD=5.58;ReadPosRankSum=-0.540;VQSLOD=2.0456;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:20:5.23:0,5,51	1/1:7,0:7:11.95:99,12,0	./.	./.	1/1:25,2:24:8.80:80,9,0	0/1:25,0:21:14.83:15,0,74	0/0:22,0:17:1.93:0,2,12	1/1:47,0:34:54.98:292,55,0	0/0:38,0:32:63.93:0,64,668	0/1:32,3:32:38.32:432,0,38	1/1:15,1:15:11.99:115,12,0	0/1:20,0:15:9.59:10,0,38	1/1:25,2:26:28.34:381,28,0	1/1:5,19:23:3.01:33,3,0	0/1:27,0:19:8.65:9,0,75	0/1:24,1:21:11.88:12,0,119	1/1:26,1:21:17.89:180,18,0	0/0:16,0:9:3.07:0,3,25	1/1:17,0:14:14.68:75,15,0	1/1:23,2:24:1.25:3,1,0	0/0:17,0:7:3.01:0,3,45	0/0:20,0:19:3.01:0,3,36	1/1:18,2:20:11.99:116,12,0	1/1:45,3:44:29.81:275,30,0	1/1:15,1:11:5.33:27,5,0	1/1:37,2:33:67.91:515,68,0	1/1:20,3:22:20.52:276,21,0	0/1:5,5:6:16.98:40,0,17
chr10	18488937	.	A	AGTGT	285.82	PASS	AB=1.000;AC=7;AF=0.135;AN=52;BaseQRankSum=2.350;DP=636;FS=12.701;HRun=0;HaplotypeScore=128.4707;InbreedingCoeff=-0.0445;MQ=34.65;MQ0=72;MQRankSum=-4.273;QD=1.87;ReadPosRankSum=-1.507;VQSLOD=1.2388;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:19:6.02:0,6,75	0/0:7,0:7:15:0,15,190	./.	./.	0/0:26,0:23:3.25:0,3,34	0/0:26,0:22:12.02:0,12,181	0/1:23,0:18:5.44:5,0,21	0/1:46,0:33:99:185,0,449	0/0:38,0:32:75.22:0,75,1278	0/0:34,0:31:88.81:0,89,1131	0/0:14,0:14:11.88:0,12,127	0/0:19,0:14:5.55:0,6,90	0/0:25,0:24:44.38:0,44,462	0/0:24,0:23:2.76:0,3,17	0/1:26,0:18:8.31:8,0,101	0/0:24,0:20:27.06:0,27,410	0/0:25,0:20:33.54:0,34,377	0/0:16,0:9:12.04:0,12,159	0/1:17,0:14:99:178,0,126	1/1:17,6:22:1.69:5,2,0	0/0:17,0:7:3.01:0,3,63	0/0:18,0:17:3.01:0,3,61	0/1:18,0:18:11.88:12,0,76	0/0:49,0:44:31.90:0,32,357	0/0:16,0:11:6.02:0,6,78	0/0:40,0:34:73.32:0,73,888	0/0:23,0:22:43.43:0,43,475	0/0:10,0:6:3.90:0,4,49
chr10	18488940	.	GAGAC	G	222.40	PASS	AB=0.937;AC=12;AF=0.231;AN=52;BaseQRankSum=6.233;DP=635;FS=20.952;HRun=0;HaplotypeScore=121.8530;InbreedingCoeff=-0.1334;MQ=34.56;MQ0=74;MQRankSum=-5.167;QD=0.96;ReadPosRankSum=0.501;VQSLOD=0.9596;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:20:2.27:0,2,120	0/0:7,0:7:14.59:0,15,91	./.	./.	0/0:27,0:24:5.98:0,6,52	0/1:26,1:23:26.69:27,0,37	0/0:22,0:17:5.84:0,6,52	0/1:45,0:33:96.82:97,0,101	0/0:39,0:33:76.75:0,77,1454	0/0:35,0:31:26.69:0,27,538	0/1:14,0:13:9.73:10,0,43	0/1:16,3:14:19.17:19,0,42	0/0:23,0:22:30.24:0,30,188	1/1:23,0:22:2.60:10,3,0	0/0:21,3:16:12.03:0,12,140	0/1:14,9:20:26.38:91,0,26	0/0:28,0:22:15.70:0,16,267	0/1:15,1:9:52.47:52,0,102	0/1:17,0:14:26.36:26,0,70	1/1:23,0:22:0.47:1,0,0	0/0:17,0:7:3.01:0,3,81	0/0:15,2:16:3.01:0,3,35	0/0:18,0:18:8.87:0,9,73	0/0:47,0:42:16.29:0,16,147	0/0:17,1:13:2.61:0,3,35	0/0:39,0:33:4.69:0,5,585	0/1:22,0:21:18.66:19,0,85	0/0:11,0:6:5.93:0,6,80
chr10	18488942	.	GAC	G	362.32	PASS	AB=0.985;AC=12;AF=0.231;AN=52;BaseQRankSum=6.053;DP=629;FS=38.238;HRun=0;HaplotypeScore=110.2470;InbreedingCoeff=-0.1878;MQ=34.42;MQ0=74;MQRankSum=-6.748;QD=1.38;ReadPosRankSum=-0.974;VQSLOD=-0.2864;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,3:21:4.23:0,4,107	0/0:8,0:8:17.37:0,17,131	./.	./.	0/0:25,0:22:4.63:0,5,16	0/1:27,0:23:14.85:15,0,37	0/0:21,0:16:5.39:0,5,53	0/1:39,6:33:63.31:355,0,63	0/0:38,0:32:63.22:0,63,1234	0/0:34,0:30:1.79:0,2,521	0/1:16,0:13:10.30:10,0,41	0/1:19,0:14:8.35:8,0,44	0/0:23,0:22:10.48:0,10,120	0/0:23,0:22:0.30:0,0,1	0/0:22,0:14:12.02:0,12,123	0/1:22,0:18:16.13:16,0,67	0/1:27,1:22:9.74:10,0,210	0/1:16,0:9:0.09:0,0,65	0/1:17,0:14:43.34:43,0,44	1/1:21,2:22:1.55:4,2,0	0/0:16,0:7:3.01:0,3,58	0/0:17,0:16:3.01:0,3,35	0/0:20,0:19:7.98:0,8,48	0/0:43,2:40:30.84:0,31,231	0/0:18,0:13:5.95:0,6,44	0/1:39,0:33:19.31:19,0,576	0/0:22,1:22:19.49:0,19,208	0/1:11,0:6:4.42:4,0,52
chr10	18488946	.	GAGAC	G	188.20	PASS	AB=0.949;AC=7;AF=0.135;AN=52;BaseQRankSum=4.497;DP=619;FS=1.830;HRun=0;HaplotypeScore=117.0516;InbreedingCoeff=0.3489;MQ=34.07;MQ0=74;MQRankSum=-3.399;QD=1.48;ReadPosRankSum=-2.267;VQSLOD=1.8345;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:20:2.27:0,2,117	0/0:8,0:8:17.61:0,18,160	./.	./.	0/0:25,0:21:9.03:0,9,119	1/1:24,2:22:11.97:124,12,0	0/0:18,3:15:9.03:0,9,112	0/1:45,0:31:2.57:3,0,65	0/0:37,0:31:76.11:0,76,1451	0/0:32,0:29:45.80:0,46,595	0/0:17,0:14:14.83:0,15,152	0/1:17,2:14:19.15:67,0,19	0/0:23,0:22:40.23:0,40,378	0/0:19,0:19:0.30:0,0,0	0/0:20,1:13:9.03:0,9,112	1/1:18,3:17:14.61:104,15,0	0/0:27,0:21:21.60:0,22,310	0/1:15,1:10:15.77:16,0,118	0/0:16,0:13:11.25:0,11,133	0/0:24,0:22:0:0,0,0	0/0:17,0:7:3.01:0,3,81	0/0:17,1:15:3.01:0,3,41	0/0:20,0:19:8.94:0,9,93	0/0:46,0:41:29.71:0,30,242	0/0:17,2:14:3.01:0,3,32	0/0:40,0:33:56.14:0,56,824	0/0:21,0:20:32.95:0,33,227	0/0:10,0:6:6.02:0,6,110
chr10	18488948	.	GAC	G	337.19	PASS	AB=0.988;AC=11;AF=0.212;AN=52;BaseQRankSum=5.446;DP=609;FS=21.232;HRun=0;HaplotypeScore=101.8010;InbreedingCoeff=0.3292;MQ=34.13;MQ0=75;MQRankSum=-4.843;QD=1.86;ReadPosRankSum=-3.371;VQSLOD=-0.5142;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:19:4.23:0,4,111	0/0:8,0:8:17.78:0,18,246	./.	./.	0/0:24,0:20:9.03:0,9,153	1/1:26,0:22:11.18:76,11,0	0/0:20,1:15:8.43:0,8,90	1/1:40,2:28:38.38:261,38,0	0/0:37,0:31:57.23:0,57,1266	0/0:28,0:25:51.97:0,52,813	0/0:18,0:15:17.63:0,18,210	0/1:18,0:13:21.75:32,0,22	0/0:23,0:22:39.77:0,40,458	0/1:20,0:19:0:0,0,0	0/0:20,0:12:9.02:0,9,108	0/1:21,0:17:16.67:17,0,24	0/0:26,1:21:20.99:0,21,359	0/1:15,0:9:0.71:1,0,120	0/1:14,1:12:62.75:69,0,63	1/1:23,1:22:2.96:19,3,0	0/0:17,0:7:3.01:0,3,58	0/0:19,0:16:3.01:0,3,39	0/0:19,0:18:9.03:0,9,143	0/0:45,0:41:35.99:0,36,411	0/0:18,0:13:3.01:0,3,38	0/0:40,0:33:31.65:0,32,936	0/0:23,0:22:44.94:0,45,491	0/0:10,0:6:6.01:0,6,86
chr10	18488982	.	CAG	C	76.25	PASS	AB=0.940;AC=7;AF=0.140;AN=50;BaseQRankSum=4.126;DP=537;FS=18.932;HRun=0;HaplotypeScore=85.7085;InbreedingCoeff=0.0616;MQ=39.08;MQ0=48;MQRankSum=-4.796;QD=0.82;ReadPosRankSum=-0.921;VQSLOD=0.3328;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:23:5.46:0,5,26	0/0:8,0:8:21.06:0,21,383	./.	./.	0/0:20,0:17:18.03:0,18,268	1/1:20,0:16:0.47:1,0,0	0/0:25,0:19:8.98:0,9,129	0/1:18,0:6:17.07:35,0,17	0/0:33,0:29:75.26:0,75,1353	0/0:24,0:23:51.15:0,51,829	0/0:19,0:17:36.04:0,36,660	0/1:20,0:18:20.74:21,0,41	0/0:19,0:18:44.94:0,45,735	0/0:20,0:20:24.08:0,24,425	0/0:23,0:16:9.03:0,9,160	0/1:13,0:11:3.96:4,0,32	0/0:34,0:33:63.33:0,63,1026	0/0:7,0:6:3.01:0,3,55	0/1:8,3:9:28.37:115,0,28	./.	0/1:10,1:5:0:0,0,0	0/0:22,0:20:3.01:0,3,55	0/0:23,0:21:21.07:0,21,365	0/0:38,0:34:39.13:0,39,683	0/0:22,0:16:3.01:0,3,31	0/0:30,0:24:63.05:0,63,1096	0/0:25,0:24:66.01:0,66,1123	0/0:13,0:9:14.91:0,15,174
chr10	18488988	.	C	CAG	58.95	PASS	AB=0.870;AC=6;AF=0.115;AN=52;BaseQRankSum=3.599;DP=521;FS=0.000;HRun=0;HaplotypeScore=88.5243;InbreedingCoeff=0.1915;MQ=39.61;MQ0=50;MQRankSum=-2.175;QD=0.70;ReadPosRankSum=-2.042;VQSLOD=1.3739;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,4:21:1.55:0,2,5	0/0:7,0:7:21.07:0,21,287	./.	./.	0/0:18,0:15:15.05:0,15,205	1/1:16,3:19:3.01:53,3,0	0/0:20,4:19:8.69:0,9,108	0/0:17,0:5:10.10:0,10,79	0/0:33,0:30:69.13:0,69,909	0/0:25,0:24:42.03:0,42,561	0/0:21,0:19:42.06:0,42,559	0/1:13,7:18:11.43:44,0,11	0/0:18,0:16:33.11:0,33,446	0/0:20,0:20:24.08:0,24,329	0/0:17,4:16:8.83:0,9,92	0/1:7,1:8:6.49:6,0,53	0/0:32,0:31:64.76:0,65,847	0/0:7,1:7:3.01:0,3,41	0/0:10,0:8:5.01:0,5,74	0/0:10,0:7:2.97:0,3,20	0/1:12,0:5:0:0,0,0	0/0:15,2:20:2.86:0,3,41	0/0:21,0:19:18.06:0,18,247	0/0:33,0:29:33.02:0,33,453	0/1:17,4:18:23.89:60,0,24	0/0:32,0:25:63.05:0,63,793	0/0:25,0:24:60.19:0,60,808	0/0:11,0:9:15.05:0,15,196
chr10	18489016	.	CAG	C	1580	PASS	AB=0.806;AC=20;AF=0.385;AN=52;BaseQRankSum=8.858;DP=513;FS=3.470;HRun=0;HaplotypeScore=104.1267;InbreedingCoeff=0.3491;MQ=44.62;MQ0=27;MQRankSum=-3.149;QD=6.78;ReadPosRankSum=-2.894;VQSLOD=2.8339;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,15:22:5.99:67,6,0	0/0:6,0:6:12.04:0,12,216	./.	./.	0/0:18,0:17:33.11:0,33,591	1/1:3,15:18:18.06:257,18,0	0/1:14,12:22:17.61:56,0,18	1/1:25,0:17:41.91:347,42,0	0/0:29,0:28:78.18:0,78,1296	0/0:19,0:19:51.17:0,51,881	0/0:20,0:20:51.16:0,51,892	1/1:0,19:19:15.01:214,15,0	0/0:16,0:15:33.08:0,33,544	0/0:26,0:25:51.08:0,51,915	1/1:7,13:17:9.01:129,9,0	0/1:5,10:14:73.97:200,0,74	0/0:39,0:39:99:0,106,1775	0/1:4,6:9:40.79:126,0,41	0/1:6,0:6:39.57:62,0,40	0/1:8,0:7:39.28:39,0,46	0/1:9,0:7:0:0,0,0	1/1:6,15:21:5.72:86,6,0	0/0:20,0:20:39.13:0,39,690	0/0:37,0:36:63.18:0,63,1060	0/1:7,12:17:31.24:156,0,31	0/0:28,0:20:54.18:0,54,938	0/0:20,1:20:39.07:0,39,892	0/1:12,1:12:18.87:19,0,350
chr10	18489020	.	GAC	G	1313.46	PASS	AB=0.861;AC=18;AF=0.346;AN=52;BaseQRankSum=9.891;DP=523;FS=1.837;HRun=0;HaplotypeScore=111.5876;InbreedingCoeff=0.3043;MQ=44.91;MQ0=25;MQRankSum=-4.243;QD=5.74;ReadPosRankSum=-2.459;VQSLOD=3.0199;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:21:7.87:33,0,8	0/0:5,0:5:15.03:0,15,251	./.	./.	0/0:19,0:18:42.13:0,42,735	1/1:19,0:19:17.81:128,18,0	0/1:24,0:21:12.95:13,0,36	1/1:9,17:17:48.09:676,48,0	0/0:29,0:28:71.95:0,72,1271	0/0:19,0:19:51.17:0,51,937	0/0:23,0:23:54.62:0,55,957	1/1:21,0:21:14.84:109,15,0	0/0:15,0:14:27.09:0,27,521	0/0:26,0:25:54.03:0,54,995	1/1:22,1:20:1.32:44,1,0	0/1:16,0:15:66.14:82,0,66	0/0:40,0:39:83.93:0,84,1822	0/1:12,0:11:40.98:65,0,41	0/1:2,5:7:37.64:139,0,38	0/1:4,6:9:40.37:98,0,40	0/1:5,3:7:0:0,0,0	1/1:21,0:21:6.97:40,7,0	0/0:22,0:22:42.13:0,42,762	0/0:36,0:35:63.22:0,63,1156	0/1:18,1:17:41.85:55,0,42	0/0:27,0:19:51.17:0,51,950	0/0:22,0:21:60:0,60,992	0/0:11,0:11:3.07:0,3,380
chr10	18489074	.	CAGAGAGACAGAAGAGAA	C	1097.73	PASS	AB=0.705;AC=12;AF=0.231;AN=52;BaseQRankSum=1.921;DP=700;FS=2.171;HRun=0;HaplotypeScore=276.1600;InbreedingCoeff=0.5453;MQ=53.75;MQ0=17;MQRankSum=-3.042;QD=6.38;ReadPosRankSum=0.088;VQSLOD=2.5242;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:3.74:0,4,9	0/0:10,0:10:27.09:0,27,1801	0/0:57,0:20:36.03:0,36,907	0/0:73,0:26:22.05:0,22,344	0/0:29,0:28:69.23:0,69,3778	0/0:9,14:23:1.25:0,1,3	1/1:23,0:23:1.53:276,2,0	./.	0/0:25,0:24:54.19:0,54,2829	0/0:30,0:30:54.19:0,54,2779	0/0:16,0:16:33.11:0,33,1683	1/1:14,16:30:3.90:180,4,0	0/0:17,0:18:28.34:0,28,1520	0/0:23,0:22:30.10:0,30,1149	0/1:15,15:30:11.28:109,0,11	0/1:12,13:24:2.30:39,0,2	0/0:41,0:40:81:0,81,3895	1/1:15,0:15:6.93:237,7,0	1/1:12,0:13:6.02:224,6,0	0/1:15,0:26:1.13:135,0,1	0/1:6,0:7:0.60:42,0,1	0/0:12,8:20:2.49:0,2,6	0/0:21,0:21:36.12:0,36,1797	0/0:31,0:30:51.39:0,51,2464	./.	0/0:21,0:21:45.15:0,45,2715	0/0:20,0:20:22.64:0,23,2916	0/0:16,0:16:36.12:0,36,2246
chr10	18489082	.	CAGAAG	C	380.02	PASS	AB=0.939;AC=8;AF=0.143;AN=56;BaseQRankSum=6.803;DP=680;FS=0.790;HRun=0;HaplotypeScore=173.8050;InbreedingCoeff=-0.1847;MQ=57.14;MQ0=16;MQRankSum=-3.843;QD=1.70;ReadPosRankSum=-2.679;VQSLOD=2.0248;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:3.65:0,4,97	0/0:11,0:11:33.11:0,33,985	0/0:62,0:24:51.91:0,52,1381	0/1:79,0:30:8.32:8,0,549	0/0:29,0:29:84.29:0,84,2521	0/0:22,0:22:16.30:0,16,332	0/1:20,0:20:70.87:71,0,494	0/1:19,0:18:99:159,0,673	0/0:24,0:23:69.23:0,69,2001	0/0:29,0:29:78.25:0,78,2212	0/0:17,0:17:45.15:0,45,1315	0/1:24,0:24:12.21:12,0,355	0/0:21,0:21:52.42:0,52,1402	0/0:22,0:21:51.07:0,51,1320	0/1:29,0:30:21.10:21,0,327	0/0:23,0:23:21.80:0,22,486	0/0:40,0:39:92.34:0,92,2651	0/1:15,0:14:10.26:10,0,514	0/1:8,2:9:80.93:81,0,481	0/1:16,10:26:99:148,0,326	0/0:7,1:7:5.50:0,6,44	0/0:13,0:13:8.51:0,9,126	0/0:19,0:19:54.17:0,54,1353	0/0:29,0:29:66.11:0,66,1891	0/0:12,0:12:12.04:0,12,247	0/0:24,0:24:69.24:0,69,1992	0/0:19,0:19:4.16:0,4,1447	0/0:16,0:16:48.16:0,48,1373
chr10	18490873	.	AT	A	2666.38	PASS	AB=0.977;AC=18;AF=0.321;AN=56;BaseQRankSum=10.359;DP=577;FS=1.790;HRun=10;HaplotypeScore=83.5352;InbreedingCoeff=0.7905;MQ=75.28;MQ0=0;MQRankSum=-2.419;QD=13.20;ReadPosRankSum=2.784;VQSLOD=3.8941;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,1:37:67.08:0,67,912	0/0:3,0:3:9.02:0,9,99	0/0:23,1:21:11.67:0,12,296	0/0:18,0:17:25.20:0,25,217	0/0:20,0:20:45.07:0,45,477	1/1:5,13:18:32.95:286,33,0	1/1:2,23:25:62.98:547,63,0	0/0:31,0:31:1.14:0,1,220	0/0:26,0:26:69.16:0,69,740	0/0:18,0:18:36.08:0,36,380	0/0:18,1:19:25.03:0,25,484	1/1:4,9:13:17.31:199,17,0	0/0:13,0:13:30.06:0,30,310	0/0:23,0:23:66.14:0,66,701	1/1:3,11:13:17.98:156,18,0	1/1:5,22:27:50.97:443,51,0	0/0:29,0:29:81.19:0,81,875	1/1:5,22:27:46.37:546,46,0	0/1:20,1:21:2.54:3,0,174	0/0:16,0:16:10.03:0,10,130	0/1:20,0:20:10.73:11,0,21	1/1:6,15:21:44.95:391,45,0	0/0:14,0:14:42.06:0,42,441	0/0:30,0:30:81.21:0,81,888	1/1:2,14:16:32.97:287,33,0	0/0:21,2:23:5.02:0,5,492	0/0:25,0:24:75.19:0,75,820	0/0:6,0:6:12.03:0,12,133
chr10	18490880	.	TTTTG	T	2228.50	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=3.776;DP=570;FS=9.148;HRun=0;HaplotypeScore=117.0836;InbreedingCoeff=0.9729;MQ=73.76;MQ0=0;MQRankSum=-2.180;QD=25.91;ReadPosRankSum=-3.321;VQSLOD=2.4152;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:81.23:0,81,1803	0/0:4,0:4:9.03:0,9,179	0/0:22,0:19:39.10:0,39,670	0/0:17,0:17:14.52:0,15,400	0/0:16,0:16:42.14:0,42,971	0/0:21,0:20:50.53:0,51,682	0/0:26,0:26:66.09:0,66,773	1/1:8,26:34:78.13:1057,78,0	0/0:25,0:25:66.23:0,66,1570	0/0:15,0:15:33.04:0,33,725	0/0:18,0:18:48.14:0,48,1004	0/0:12,0:12:27.09:0,27,363	0/0:14,0:14:36:0,36,743	0/0:24,0:24:63.17:0,63,1404	0/0:14,0:13:24.06:0,24,309	0/0:27,0:27:51.13:0,51,651	0/0:29,0:29:78.13:0,78,1777	0/0:27,0:27:69.22:0,69,915	1/1:9,10:19:36.03:491,36,0	1/1:9,5:14:23.88:325,24,0	1/1:3,16:19:33.07:514,33,0	0/0:20,0:20:51.16:0,51,705	0/0:15,0:15:42.11:0,42,874	0/0:29,0:29:78.22:0,78,1814	0/0:16,0:16:39.12:0,39,510	0/0:22,0:22:56.56:0,57,1227	0/0:28,0:27:66.20:0,66,1484	0/0:6,0:6:14.79:0,15,300
chr10	18491255	.	T	TAAC	3441.83	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=11.681;DP=725;FS=0.535;HRun=0;HaplotypeScore=119.1928;InbreedingCoeff=0.9991;MQ=88.11;MQ0=0;MQRankSum=-11.723;QD=66.19;ReadPosRankSum=0.491;VQSLOD=4.5122;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:48:99:0,144,2654	0/0:14,0:14:42.14:0,42,782	0/0:31,0:31:93.31:0,93,1666	0/0:26,0:26:72.15:0,72,1198	0/0:30,0:30:90.31:0,90,1668	0/0:23,0:23:69.24:0,69,1286	0/0:28,0:28:84.29:0,84,1565	1/1:0,14:15:45.15:1022,45,0	0/0:25,0:25:75.24:0,75,1366	0/0:35,0:35:99:0,99,1771	0/0:25,0:25:69.13:0,69,1285	0/0:31,0:31:93.30:0,93,1701	0/0:29,0:29:84.29:0,84,1558	0/0:29,0:29:87.30:0,87,1613	0/0:28,0:28:84.27:0,84,1534	0/0:20,0:20:60.21:0,60,1108	0/0:35,0:35:99:0,105,1926	0/0:37,0:37:99:0,111,1985	1/1:0,9:10:27.09:628,27,0	1/1:0,18:18:54.19:1244,54,0	1/1:0,9:9:24.08:548,24,0	0/0:23,0:23:69.24:0,69,1287	0/0:23,0:23:69.20:0,69,1252	0/0:44,0:44:99:0,132,2391	0/0:27,0:27:78.27:0,78,1448	0/0:31,0:31:90.29:0,90,1647	0/0:19,0:19:57.20:0,57,1063	0/0:11,0:11:33.11:0,33,611
chr10	18493342	.	T	TC	1559.85	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=11.090;DP=707;FS=11.749;HRun=3;HaplotypeScore=85.7295;InbreedingCoeff=0.9983;MQ=93.01;MQ0=0;MQRankSum=-9.070;QD=22.61;ReadPosRankSum=-3.064;VQSLOD=1.7022;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,147,1758	0/0:15,0:15:42.12:0,42,493	0/0:30,0:30:75.20:0,75,868	0/0:33,0:34:62.42:0,62,822	0/0:18,0:18:51.13:0,51,588	0/0:30,0:30:87.22:0,87,1018	0/0:37,0:37:99:0,99,1168	1/1:8,16:24:52.05:670,52,0	0/0:23,0:23:66.20:0,66,792	0/0:26,0:26:72.21:0,72,857	0/0:19,0:19:47.82:0,48,576	0/0:32,0:32:93.23:0,93,1089	0/0:26,0:26:78.22:0,78,923	0/0:21,0:21:57.16:0,57,672	0/0:20,0:20:57.16:0,57,672	0/0:36,0:36:93.28:0,93,1115	0/0:29,0:29:87.27:0,87,1044	0/0:20,0:20:60.18:0,60,720	1/1:4,9:14:33.09:413,33,0	1/1:0,10:10:21.03:261,21,0	1/1:3,18:21:30.04:376,30,0	0/0:13,0:12:27.08:0,27,324	0/0:22,0:22:60.18:0,60,719	0/0:43,0:43:99:0,123,1435	0/0:25,0:24:66.06:0,66,743	0/0:33,0:32:96.28:0,96,1143	0/0:21,0:21:63.19:0,63,756	0/0:13,0:13:39.12:0,39,468
chr10	18493593	.	GGTCTT	G	4135.70	PASS	AB=1.000;AC=26;AF=0.464;AN=56;BaseQRankSum=11.341;DP=594;FS=0.720;HRun=0;HaplotypeScore=136.2692;InbreedingCoeff=0.1904;MQ=85.44;MQ0=7;MQRankSum=-2.213;QD=11.30;ReadPosRankSum=0.421;VQSLOD=2.8203;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:24:21.27:316,21,0	0/0:14,0:14:41.69:0,42,310	0/0:40,0:29:49.63:0,50,551	0/0:60,0:36:47.86:0,48,447	0/0:16,0:16:7.97:0,8,234	0/1:22,0:22:99:309,0,222	1/1:26,0:25:41.82:497,42,0	1/1:29,0:28:56.86:486,57,0	0/1:12,0:12:42.53:43,0,183	0/0:21,0:21:39.44:0,39,373	0/0:14,0:14:18.67:0,19,216	0/1:9,0:9:0.10:153,0,0	0/0:17,0:17:1.87:0,2,215	0/1:22,0:22:46.08:46,0,215	0/1:17,0:17:12.88:197,0,13	1/1:23,0:23:30.24:311,30,0	0/1:29,0:29:9.88:10,0,406	0/1:15,0:14:18.68:241,0,19	1/1:17,0:16:24.51:228,25,0	1/1:15,4:19:41.70:314,42,0	1/1:18,0:18:47.72:377,48,0	0/1:10,0:10:28.22:122,0,28	0/0:20,0:20:9.77:0,10,251	0/1:29,0:28:99:205,0,277	0/1:21,0:20:0.54:263,0,1	0/0:26,0:26:43.15:0,43,471	0/1:12,0:12:7.03:7,0,159	0/1:12,0:12:13.99:14,0,93
chr10	18493599	.	GTCTTC	G	1343.26	PASS	AB=0.986;AC=25;AF=0.500;AN=50;BaseQRankSum=-5.558;DP=559;FS=6.637;HRun=0;HaplotypeScore=139.8372;InbreedingCoeff=0.3595;MQ=82.08;MQ0=13;MQRankSum=2.241;QD=4.52;ReadPosRankSum=0.906;VQSLOD=2.2552;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:24:3.12:3,0,135	1/1:15,0:14:2.99:24,3,0	./.	0/1:55,0:31:0:0,0,0	0/1:12,1:13:6.64:46,0,7	0/0:22,0:22:21.02:0,21,498	0/0:27,0:26:7.25:0,7,72	./.	0/1:12,0:12:10.41:80,0,10	1/1:18,0:18:3.01:38,3,0	1/1:11,0:11:3.01:38,3,0	0/0:12,0:11:9.03:0,9,156	1/1:11,3:14:5.95:70,6,0	1/1:12,6:18:9.03:156,9,0	0/0:15,0:15:6.02:0,6,85	0/0:20,0:20:11.98:0,12,112	1/1:31,1:31:10.70:293,11,0	0/0:15,0:13:4.83:0,5,87	0/0:19,0:15:5.97:0,6,45	./.	0/0:19,0:19:3:0,3,25	0/0:9,0:8:3.01:0,3,74	1/1:15,0:15:3.01:52,3,0	1/1:22,4:25:12.01:511,12,0	0/0:20,0:18:7.84:0,8,89	0/1:23,0:23:35.95:84,0,36	1/1:8,2:10:2.93:52,3,0	1/1:6,5:11:3.01:52,3,0
chr10	18493721	.	CTCCCT	C	848.19	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=4.158;DP=470;FS=5.730;HRun=0;HaplotypeScore=141.6897;InbreedingCoeff=0.8174;MQ=52.10;MQ0=12;MQRankSum=-5.881;QD=18.44;ReadPosRankSum=-1.587;VQSLOD=2.6027;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:10.68:0,11,437	0/0:13,0:13:33.11:0,33,955	0/0:50,0:11:27.03:0,27,453	0/0:58,0:17:23.69:0,24,270	0/0:16,0:16:33.53:0,34,875	0/0:11,0:11:30.10:0,30,749	0/0:16,0:16:42.14:0,42,1112	1/1:5,6:10:4.94:166,5,0	0/0:17,0:17:42.09:0,42,1018	0/0:22,0:22:60.21:0,60,1690	0/0:10,0:10:26.93:0,27,525	0/0:12,0:12:33.07:0,33,896	0/0:15,0:14:27.06:0,27,665	0/0:21,0:21:24.11:0,24,1477	0/0:12,0:12:30.10:0,30,846	0/0:15,0:15:36.12:0,36,980	0/0:17,0:15:33.08:0,33,843	0/1:10,0:9:11.69:12,0,333	1/1:8,2:8:14.98:209,15,0	1/1:2,7:9:27.01:409,27,0	1/1:4,2:6:14.97:206,15,0	0/0:12,0:12:30.02:0,30,680	0/0:17,0:17:49.67:0,50,1319	0/0:23,0:23:42.46:0,42,1017	0/0:12,0:12:32.96:0,33,642	0/0:21,0:21:45.15:0,45,1324	0/0:11,0:11:33.11:0,33,982	0/0:8,0:8:24.08:0,24,699
chr10	18493770	.	TCCTTTC	T	4140.78	PASS	AB=0.909;AC=31;AF=0.554;AN=56;BaseQRankSum=8.476;DP=388;FS=33.014;HRun=0;HaplotypeScore=109.0600;InbreedingCoeff=-0.2571;MQ=35.98;MQ0=29;MQRankSum=-7.428;QD=12.86;ReadPosRankSum=2.490;VQSLOD=1.2520;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,0:9:0.17:138,0,0	0/1:10,0:10:91.33:91,0,233	0/0:12,0:2:6.02:0,6,108	0/0:16,0:1:3.01:0,3,32	0/1:20,6:26:99:415,0,797	1/1:8,0:8:12.10:137,12,0	1/1:10,0:9:16.32:151,16,0	0/0:13,0:6:5.23:0,5,118	0/0:25,0:22:60.21:0,60,2018	0/1:19,3:22:99:444,0,751	0/1:17,1:17:99:122,0,636	0/1:4,0:4:1.72:86,0,2	0/1:8,0:16:99:187,0,543	0/1:19,0:20:99:190,0,513	1/1:8,0:7:17.70:142,18,0	1/1:10,0:8:15.67:139,16,0	0/1:13,2:10:99:151,0,334	0/1:11,1:10:7.12:147,0,7	0/1:9,0:2:0:0,0,0	1/1:5,0:5:5.80:36,6,0	0/1:5,0:4:11.90:12,0,39	1/1:10,0:10:13.38:223,13,0	0/1:18,0:19:99:159,0,591	0/1:17,0:15:65.04:65,0,350	0/1:18,0:18:38.42:161,0,38	0/1:16,7:21:99:590,0,589	0/1:7,1:8:99:126,0,344	0/1:13,3:13:99:230,0,514
chr10	18496460	.	GGT	G	1663.08	PASS	AB=0.813;AC=26;AF=0.500;AN=52;BaseQRankSum=-3.642;DP=356;FS=2.307;HRun=0;HaplotypeScore=119.4490;InbreedingCoeff=-0.1907;MQ=44.14;MQ0=5;MQRankSum=2.586;QD=6.00;ReadPosRankSum=-2.905;VQSLOD=2.8647;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:5,3:8:23.73:31,0,24	1/1:4,0:4:9.01:88,9,0	0/1:11,0:2:2.22:2,0,37	0/0:11,0:2:9.90:0,10,99	1/1:11,2:13:16.53:166,17,0	0/1:13,3:15:55.17:55,0,56	0/1:8,12:18:8.13:8,0,11	0/0:15,0:16:29.03:0,29,245	0/0:24,0:24:54.10:0,54,591	0/1:7,2:10:36.51:156,0,37	./.	0/1:18,9:26:65.85:115,0,66	0/1:4,3:7:10.67:44,0,11	0/1:9,2:11:9.59:105,0,10	0/1:13,7:16:50.54:56,0,51	0/1:11,10:21:45.37:239,0,45	0/1:8,5:15:4.45:241,0,4	0/1:6,1:6:9.80:59,0,10	0/0:13,0:14:27.44:0,27,374	0/0:2,0:2:2.97:0,3,20	0/1:26,0:29:2.07:2,0,460	0/1:10,1:12:2.78:109,0,3	1/1:9,6:15:11.80:113,12,0	./.	1/1:7,2:7:0.36:14,0,0	0/1:5,4:8:75.38:151,0,75	1/1:5,1:6:0.42:55,0,0	0/1:4,0:4:4.27:4,0,34
chr10	18496462	.	T	TG	872.96	PASS	AB=1.000;AC=25;AF=0.446;AN=56;BaseQRankSum=-1.139;DP=402;FS=1.480;HRun=2;HaplotypeScore=150.4447;InbreedingCoeff=-0.0083;MQ=43.17;MQ0=6;MQRankSum=2.264;QD=3.40;ReadPosRankSum=-2.870;VQSLOD=-0.6745;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:8,0:8:23.89:31,0,24	1/1:5,0:5:4.66:21,5,0	0/1:12,0:3:2.24:2,0,30	0/0:12,0:2:9.87:0,10,86	1/1:16,0:16:17.54:162,18,0	0/1:19,0:18:50.38:50,0,52	0/0:22,0:19:5.11:0,5,26	0/0:18,0:17:35.35:0,35,313	0/0:24,1:25:6.46:0,6,530	0/1:12,0:12:28.84:61,0,29	1/1:4,1:5:5.27:21,5,0	0/1:32,0:29:61.37:96,0,61	0/1:9,0:9:17.37:19,0,17	0/1:12,0:12:1.74:91,0,2	0/1:25,0:20:46.48:52,0,46	0/1:24,0:24:64.65:65,0,79	0/1:16,0:16:34.67:155,0,35	0/0:7,0:6:11.49:0,11,97	0/0:16,0:15:9.61:0,10,293	0/0:2,0:2:2.93:0,3,20	0/0:31,0:31:35.94:0,36,454	1/1:14,1:15:1.56:102,2,0	1/1:16,1:17:7.14:45,7,0	0/1:10,0:10:0:0,0,0	1/1:7,2:7:4.42:18,4,0	0/0:11,0:10:5.35:0,5,101	0/1:6,0:6:8.50:26,0,8	0/1:5,0:5:18.24:18,0,24
chr10	18496480	.	TTATTTC	T	605.21	PASS	AB=0.916;AC=12;AF=0.214;AN=56;BaseQRankSum=10.110;DP=579;FS=83.073;HRun=0;HaplotypeScore=208.1331;InbreedingCoeff=-0.2960;MQ=50.18;MQ0=7;MQRankSum=-8.840;QD=2.11;ReadPosRankSum=3.834;VQSLOD=-0.4664;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,1:19:33.72:0,34,1267	0/0:4,0:4:12.04:0,12,339	0/0:35,0:22:69.07:0,69,2169	0/1:31,1:18:19.03:19,0,1416	0/0:18,2:20:38.44:0,38,1015	0/1:21,3:23:48.63:49,0,1003	0/0:29,0:26:51.15:0,51,1413	0/0:23,0:22:39.48:0,39,1609	0/0:26,3:29:17.79:0,18,1959	0/0:17,2:19:8.25:0,8,1301	0/0:5,1:6:5.97:0,6,191	0/1:36,3:37:99:116,0,1927	0/1:12,1:13:6.30:6,0,671	0/1:16,2:18:99:105,0,906	0/0:27,1:24:11.96:0,12,1535	0/1:30,4:33:99:218,0,1932	0/1:18,1:19:43.96:44,0,1063	0/0:10,0:9:18.28:0,18,675	0/1:19,0:17:22.15:22,0,1163	0/0:3,0:3:8.82:0,9,223	0/1:46,0:47:16.88:17,0,2691	0/1:18,4:22:33.31:33,0,877	0/0:17,0:17:26.92:0,27,706	0/0:24,0:24:50.74:0,51,1381	0/1:12,1:11:50.14:50,0,640	0/0:19,0:18:37.63:0,38,1448	0/0:7,0:7:1.43:0,1,427	0/1:4,2:6:72.77:73,0,200
chr10	18496503	.	T	TG	447.45	PASS	AB=0.848;AC=10;AF=0.179;AN=56;BaseQRankSum=12.361;DP=818;FS=89.520;HRun=1;HaplotypeScore=241.9102;InbreedingCoeff=-0.2225;MQ=49.36;MQ0=9;MQRankSum=-8.970;QD=1.57;ReadPosRankSum=-0.995;VQSLOD=-0.5830;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:60.19:0,60,767	0/1:8,4:12:99:134,0,179	0/0:55,0:37:94.81:0,95,1161	0/0:49,0:31:56.20:0,56,919	0/0:22,5:27:51.15:0,51,662	0/1:26,6:31:66.20:66,0,597	0/1:35,4:36:50.40:50,0,921	0/0:33,0:32:86.97:0,87,1126	0/1:31,3:34:9.18:9,0,737	0/1:22,4:26:20.54:21,0,590	0/0:9,7:16:23.11:0,23,278	0/0:41,8:45:12.64:0,13,1011	0/0:15,2:17:29.06:0,29,529	0/0:25,1:26:56.31:0,56,736	0/1:25,6:28:89:89,0,581	0/1:33,8:40:37.62:38,0,935	0/0:24,2:26:26.65:0,27,656	0/0:16,0:13:22.11:0,22,343	0/0:24,0:19:39.09:0,39,485	0/0:7,0:7:5.58:0,6,77	0/0:65,2:65:99:0,105,1273	0/1:25,7:32:6.43:6,0,546	0/0:21,8:29:38.72:0,39,506	0/0:35,0:35:75.16:0,75,972	0/0:18,1:19:6.36:0,6,455	0/1:22,4:25:99:105,0,582	0/0:6,1:7:15.93:0,16,196	0/1:9,2:11:70.30:70,0,165
chr10	18496567	.	CTG	C	4535.38	PASS	AB=1.000;AC=30;AF=0.556;AN=54;BaseQRankSum=-3.110;DP=695;FS=42.914;HRun=0;HaplotypeScore=171.9344;InbreedingCoeff=0.7016;MQ=45.01;MQ0=25;MQRankSum=1.466;QD=10.88;ReadPosRankSum=3.400;VQSLOD=2.7120;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,9:15:16.89:274,17,0	0/0:6,0:6:8.96:0,9,86	./.	0/1:53,0:15:0.16:0,0,76	0/0:12,0:14:8.68:0,9,73	1/1:11,9:19:32.88:307,33,0	1/1:30,22:49:89.96:952,90,0	0/1:21,0:11:19.62:20,0,24	0/0:42,1:43:24.41:0,24,1248	0/0:21,0:21:31.49:0,31,247	0/1:4,0:4:0:0,0,0	1/1:15,17:31:53.66:533,54,0	0/0:29,0:29:25.56:0,26,174	0/1:28,0:27:2.87:3,0,85	1/1:11,21:28:56.92:590,57,0	1/1:10,14:24:57.27:572,57,0	0/0:27,0:26:10.56:0,11,106	1/1:13,12:22:36.21:525,36,0	1/1:6,0:5:2.67:13,3,0	1/1:12,0:12:8.80:36,9,0	1/1:41,0:39:11.53:109,12,0	1/1:8,6:13:24.07:285,24,0	1/1:8,0:8:3.73:16,4,0	0/0:39,0:41:31.08:0,31,245	1/1:12,7:21:30.61:301,31,0	0/0:21,0:21:26.99:0,27,196	0/0:12,0:13:17.22:0,17,109	0/0:1,0:5:3:0,3,26
chr10	18496571	.	G	GGTC	161.88	PASS	AB=0.989;AC=8;AF=0.143;AN=56;BaseQRankSum=4.021;DP=748;FS=1.525;HRun=0;HaplotypeScore=215.5727;InbreedingCoeff=0.1613;MQ=43.12;MQ0=36;MQRankSum=-2.361;QD=1.22;ReadPosRankSum=-0.221;VQSLOD=2.6400;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:19:38.73:0,39,417	0/0:6,0:6:15.03:0,15,197	0/0:62,0:4:11.86:0,12,84	0/0:55,0:14:15.23:0,15,357	0/1:14,0:14:0.74:1,0,63	0/0:22,0:21:20.12:0,20,516	0/0:48,0:44:99:0,105,1185	0/1:26,0:13:32.26:32,0,120	0/0:44,0:44:99:0,108,1905	0/0:22,0:22:44.58:0,45,510	0/1:4,0:4:0.02:0,0,0	0/0:37,0:33:65.56:0,66,791	0/0:29,0:28:6.14:0,6,656	0/0:27,0:25:38.08:0,38,692	0/0:35,0:31:84.19:0,84,1079	0/0:29,0:28:51.93:0,52,752	0/0:27,0:26:45.48:0,45,631	0/0:25,0:22:65.53:0,66,685	1/1:14,0:9:4.17:55,4,0	0/0:15,0:16:6.91:0,7,143	0/1:53,4:52:99:166,0,193	0/0:15,0:14:23.58:0,24,203	0/0:9,0:9:3.01:0,3,53	0/0:42,0:42:47.49:0,47,746	0/0:20,0:21:32.65:0,33,305	0/0:23,0:23:43.45:0,43,538	0/1:13,0:13:18.80:19,0,196	0/1:5,0:5:0.99:1,0,50
chr10	18496582	.	TGTG	T	600.67	PASS	AB=0.978;AC=7;AF=0.125;AN=56;BaseQRankSum=7.381;DP=826;FS=24.449;HRun=0;HaplotypeScore=211.4154;InbreedingCoeff=0.1552;MQ=39.68;MQ0=41;MQRankSum=-8.006;QD=2.26;ReadPosRankSum=-5.669;VQSLOD=-0.4362;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:24:41.35:0,41,340	0/0:5,0:6:14.87:0,15,219	0/1:71,0:5:9.88:10,0,106	0/0:68,0:11:26.42:0,26,350	0/0:13,0:13:14.36:0,14,259	0/0:21,0:20:22.77:0,23,223	0/0:45,0:41:55.67:0,56,454	0/1:34,5:27:60.30:60,0,227	0/0:43,0:42:99:0,105,2215	0/0:26,0:26:53.47:0,53,986	0/0:6,0:6:5.93:0,6,71	0/0:39,0:35:16.27:0,16,264	0/0:26,0:26:53.58:0,54,767	0/0:23,0:21:54.11:0,54,657	0/0:33,0:29:39.80:0,40,285	0/0:32,0:31:21.78:0,22,296	0/0:23,0:22:41.56:0,42,611	0/0:25,0:23:62.31:0,62,412	0/1:30,0:20:4.79:5,0,141	0/1:24,0:23:47.45:133,0,47	1/1:71,12:80:16.23:512,16,0	0/0:15,0:13:22.02:0,22,97	0/0:10,0:10:0.10:0,0,123	0/0:39,0:39:72.70:0,73,1042	0/1:16,0:16:3.68:4,0,71	0/0:22,0:21:49.97:0,50,822	0/0:12,0:13:29.88:0,30,425	0/0:5,0:5:6:0,6,76
chr10	18496618	.	ATG	A	2724.89	PASS	AB=0.727;AC=4;AF=0.071;AN=56;BaseQRankSum=3.092;DP=1056;FS=1.318;HRun=0;HaplotypeScore=220.9654;InbreedingCoeff=-0.0813;MQ=45.67;MQ0=28;MQRankSum=-5.695;QD=8.54;ReadPosRankSum=-2.275;VQSLOD=2.9853;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:40:99:0,99,1660	0/0:9,0:9:18.06:0,18,305	0/0:72,0:14:11.30:0,11,467	0/0:83,3:28:67.74:0,68,1034	0/0:20,0:20:51.16:0,51,841	0/0:25,0:24:69.24:0,69,1174	0/0:37,0:33:81.28:0,81,1353	0/1:59,38:82:99:1168,0,1081	0/0:40,0:39:94.84:0,95,1537	0/0:32,1:33:48.17:0,48,1314	0/0:10,0:10:17.83:0,18,300	0/0:37,0:33:87.28:0,87,1433	0/0:28,0:27:60.04:0,60,998	0/0:23,0:23:51.06:0,51,758	0/0:36,0:32:72.25:0,72,1231	0/0:37,0:35:90.31:0,90,1516	0/0:23,0:23:60.19:0,60,1011	0/0:26,0:25:49.07:0,49,957	0/1:28,9:27:99:365,0,317	0/1:19,19:38:99:641,0,523	0/1:89,58:136:99:662,0,1958	0/0:17,0:16:36.12:0,36,616	0/0:16,0:16:36.12:0,36,597	0/0:44,0:44:99:0,103,1708	0/0:18,0:18:41.88:0,42,653	0/0:35,0:33:77.39:0,77,1137	0/0:17,0:17:48.16:0,48,805	0/0:6,0:6:9.03:0,9,154
chr10	18496683	.	G	GGT	5831.27	PASS	AB=0.789;AC=22;AF=0.393;AN=56;BaseQRankSum=-0.835;DP=990;FS=2.630;HRun=0;HaplotypeScore=221.6135;InbreedingCoeff=0.6900;MQ=49.50;MQ0=34;MQRankSum=2.146;QD=11.85;ReadPosRankSum=2.888;VQSLOD=4.5452;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:44,0:43:20.49:20,0,27	0/0:19,0:20:35.79:0,36,344	0/0:65,0:20:18.33:0,18,212	0/0:60,0:21:21.04:0,21,227	0/0:27,0:26:26.91:0,27,296	0/1:9,16:26:29.39:530,0,29	1/1:12,16:28:36.12:570,36,0	0/1:30,0:27:16.48:68,0,16	0/0:39,0:39:84.01:0,84,935	0/0:29,0:28:45.54:0,46,503	0/0:14,0:14:26.08:0,26,275	1/1:3,23:26:56.93:894,57,0	0/0:33,0:32:58.33:0,58,667	0/0:37,0:39:77.81:0,78,843	1/1:9,33:43:19.93:942,20,0	1/1:17,20:34:69.23:1064,69,0	0/0:30,0:31:60:0,60,680	1/1:19,11:29:21.40:753,21,0	1/1:38,0:33:28.53:184,29,0	1/1:15,0:22:22.54:185,23,0	1/1:99,0:115:10.27:160,10,0	0/1:10,11:20:53.43:163,0,53	0/0:20,0:18:21.02:0,21,233	0/0:63,0:64:84.62:0,85,1278	1/1:15,4:16:23.99:297,24,0	0/0:29,0:27:45.06:0,45,516	0/0:14,0:14:21.04:0,21,229	0/0:9,0:8:18.04:0,18,202
chr10	18496708	.	GCAC	G	89.06	PASS	AB=0.737;AC=1;AF=0.018;AN=56;BaseQRankSum=4.111;DP=763;FS=0.000;HRun=0;HaplotypeScore=175.7002;InbreedingCoeff=-0.0185;MQ=69.99;MQ0=8;MQRankSum=-4.266;QD=6.36;ReadPosRankSum=-2.018;VQSLOD=2.6412;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:53,1:54:99:0,154,3733	0/0:16,0:16:48.16:0,48,1147	0/0:40,1:22:60.20:0,60,1387	0/0:46,0:34:89.85:0,90,1999	0/0:22,0:22:57.20:0,57,1391	0/0:20,0:20:48.16:0,48,1183	0/0:23,0:23:57.17:0,57,1354	0/0:23,1:23:62.06:0,62,734	0/0:30,0:30:86.97:0,87,2080	0/0:26,1:27:22.41:0,22,1755	0/0:20,0:20:51.07:0,51,1205	0/0:29,0:29:72.11:0,72,1773	0/0:34,0:33:93.32:0,93,2234	0/0:33,0:33:93.32:0,93,2288	0/0:39,0:39:87.28:0,87,2094	0/0:35,0:34:99:0,102,2455	0/0:26,1:27:78.27:0,78,1899	0/0:21,0:21:63.22:0,63,1522	0/1:9,5:13:99:164,0,192	0/0:14,4:18:31.53:0,32,323	0/0:16,24:39:26.23:0,26,302	0/0:18,0:18:36.12:0,36,885	0/0:17,0:17:42.14:0,42,1032	0/0:52,0:52:99:0,147,3535	0/0:16,0:14:39.13:0,39,960	0/0:26,0:25:75.26:0,75,1795	0/0:13,0:12:33.11:0,33,803	0/0:7,0:7:21.07:0,21,517
chr10	18496711	.	C	CATT	4136.89	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=2.471;DP=780;FS=37.855;HRun=0;HaplotypeScore=168.2396;InbreedingCoeff=0.9969;MQ=73.01;MQ0=6;MQRankSum=-10.106;QD=38.30;ReadPosRankSum=-7.322;VQSLOD=0.9871;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,154,2836	0/0:17,0:17:51.13:0,51,875	0/0:38,0:22:60.12:0,60,1031	0/0:47,0:38:88.45:0,88,1588	0/0:22,0:22:57.04:0,57,1060	0/0:21,0:21:48.15:0,48,864	0/0:23,0:23:57.20:0,57,1045	1/1:8,22:28:78.26:1831,78,0	0/0:30,0:30:90.20:0,90,1630	0/0:29,0:28:78.17:0,78,1371	0/0:21,0:21:50.96:0,51,938	0/0:27,0:27:69.22:0,69,1271	0/0:37,0:36:90.31:0,90,1674	0/0:33,0:33:93.32:0,93,1732	0/0:40,0:40:87.30:0,87,1614	0/0:34,0:33:99:0,99,1836	0/0:28,0:28:78.23:0,78,1373	0/0:21,0:21:60.21:0,60,1119	1/1:13,6:18:19.02:571,19,0	1/1:7,11:18:42.01:871,42,0	1/1:25,16:40:49.26:864,49,0	0/0:19,0:19:36.12:0,36,668	0/0:16,0:16:42.14:0,42,782	0/0:51,0:51:99:0,144,2664	0/0:17,0:15:42.13:0,42,752	0/0:26,0:25:72.25:0,72,1322	0/0:12,0:11:33.11:0,33,615	0/0:7,0:7:21.07:0,21,380
chr10	18496757	.	ATTCG	A	3928.26	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=9.083;DP=794;FS=18.069;HRun=0;HaplotypeScore=150.0534;InbreedingCoeff=0.9970;MQ=93.96;MQ0=0;MQRankSum=-10.042;QD=45.68;ReadPosRankSum=-3.068;VQSLOD=2.5353;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:59,0:59:99:0,163,4309	0/0:11,0:11:24.08:0,24,655	0/0:41,0:41:99:0,120,2930	0/0:37,0:37:99:0,105,2348	0/0:32,0:32:75.26:0,75,1901	0/0:15,0:15:33.11:0,33,864	0/0:33,0:33:99:0,99,2704	1/1:4,27:30:75.26:1439,75,0	0/0:28,0:28:84.27:0,84,2236	0/0:44,0:43:99:0,126,3353	0/0:18,0:18:45.15:0,45,1159	0/0:24,0:24:54.18:0,54,1445	0/0:35,0:35:99:0,99,2512	0/0:22,0:22:60.21:0,60,1564	0/0:36,0:36:90.31:0,90,2406	0/0:35,0:35:99:0,105,2872	0/0:30,0:30:90.28:0,90,2338	0/0:33,0:33:99:0,99,2659	1/1:0,11:11:33.11:639,33,0	1/1:3,21:23:57.19:1064,57,0	1/1:3,17:20:42.14:787,42,0	0/0:23,0:20:51.18:0,51,1379	0/0:35,0:35:93.32:0,93,2396	0/0:36,0:36:99:0,105,2782	0/0:19,0:19:54.19:0,54,1447	0/0:34,0:34:96.32:0,96,2520	0/0:22,0:22:63.22:0,63,1700	0/0:6,0:6:18.06:0,18,480
chr10	18502501	.	GTA	G	6162.43	PASS	AB=1.000;AC=47;AF=0.839;AN=56;BaseQRankSum=5.153;DP=534;FS=0.471;HRun=0;HaplotypeScore=145.5273;InbreedingCoeff=0.5663;MQ=60.12;MQ0=19;MQRankSum=-3.067;QD=13.48;ReadPosRankSum=1.205;VQSLOD=4.5417;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:38,0:38:58.92:59,0,396	0/1:7,0:7:12.13:45,0,12	0/0:30,0:16:42.42:0,42,333	0/0:28,0:18:31.84:0,32,377	1/1:15,0:15:15.69:100,16,0	1/1:14,2:15:26.73:203,27,0	1/1:20,0:20:50.19:380,50,0	1/1:12,0:12:25.28:278,25,0	0/0:19,0:19:20.38:0,20,205	1/1:21,3:23:16.22:320,16,0	1/1:20,0:19:45.53:299,46,0	1/1:23,0:21:35.62:273,36,0	1/1:9,1:10:6.93:122,7,0	1/1:14,4:19:1.57:225,2,0	1/1:17,2:19:39.36:311,39,0	1/1:16,2:16:38.70:313,39,0	1/1:25,2:27:37.57:327,38,0	1/1:19,6:24:71.36:578,71,0	1/1:7,0:7:20.69:161,21,0	1/1:6,2:8:17.96:145,18,0	1/1:35,3:34:48.07:456,48,0	1/1:13,4:17:35.53:276,36,0	1/1:14,4:17:14.27:247,14,0	1/1:24,2:26:9.64:274,10,0	1/1:12,2:14:31.88:258,32,0	1/1:22,1:22:20.16:320,20,0	1/1:7,2:9:23.86:181,24,0	0/1:4,0:2:3.16:13,0,3
chr10	18502563	.	T	TA	19362.72	PASS	AC=48;AF=0.889;AN=54;BaseQRankSum=3.089;DP=561;FS=7.924;HRun=2;HaplotypeScore=122.8417;InbreedingCoeff=0.9985;MQ=85.80;MQ0=1;MQRankSum=-6.884;QD=39.20;ReadPosRankSum=2.774;VQSLOD=3.7045;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,32:32:90.30:1290,90,0	1/1:1,10:11:24.08:345,24,0	0/0:19,0:18:45.07:0,45,492	0/0:24,0:24:57.48:0,57,600	1/1:0,11:11:30.06:408,30,0	1/1:0,18:18:48.16:691,48,0	1/1:1,18:19:45.15:647,45,0	1/1:0,27:27:81.25:1129,81,0	0/0:24,0:24:69.20:0,69,841	1/1:2,24:26:72.24:1035,72,0	1/1:1,10:11:27.09:388,27,0	1/1:0,20:20:60.20:859,60,0	1/1:0,21:21:60.20:863,60,0	1/1:1,19:20:57.19:820,57,0	1/1:3,25:28:66.22:950,66,0	1/1:1,15:16:48.16:677,48,0	1/1:0,30:30:87.29:1251,87,0	1/1:0,21:21:63.21:896,63,0	1/1:1,17:18:51.17:732,51,0	1/1:0,14:14:39.13:561,39,0	1/1:2,25:27:69.23:988,69,0	1/1:2,22:24:63.13:880,63,0	1/1:1,20:21:60.20:863,60,0	1/1:1,23:24:63.21:901,63,0	1/1:0,10:10:30.10:431,30,0	1/1:1,27:28:80.83:1111,81,0	1/1:0,17:17:45.15:647,45,0	./.
chr10	18503607	.	TACACACAC	T	1134.36	PASS	AC=16;AF=0.320;AN=50;BaseQRankSum=4.030;DP=585;FS=47.284;HRun=0;HaplotypeScore=149.1135;InbreedingCoeff=0.6538;MQ=74.04;MQ0=10;MQRankSum=-6.973;QD=7.37;ReadPosRankSum=0.348;VQSLOD=1.3088;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:32:39.08:0,39,1217	0/0:8,0:8:3.01:0,3,87	./.	./.	0/0:3,0:7:3.01:0,3,105	1/1:8,6:14:6.02:114,6,0	1/1:19,10:29:7.26:116,7,0	0/0:20,0:19:6.02:0,6,131	0/0:15,0:15:15.67:0,16,475	0/0:14,0:19:27.08:0,27,704	0/0:7,0:10:6.46:0,6,225	1/1:10,5:15:6.02:150,6,0	0/0:12,0:21:6.02:0,6,172	./.	1/1:17,12:30:18.06:393,18,0	1/1:8,4:11:6.02:150,6,0	0/0:24,0:35:45.15:0,45,1486	1/1:20,7:27:1.81:73,2,0	0/0:13,0:13:3.01:0,3,61	0/0:14,0:14:9.03:0,9,274	0/0:38,0:36:37.53:0,38,1125	1/1:11,7:18:9.50:226,9,0	0/0:6,0:13:6.02:0,6,195	0/0:41,0:49:72.25:0,72,2437	1/1:8,1:9:3.01:75,3,0	0/0:19,0:19:27.09:0,27,630	0/0:17,0:17:9.03:0,9,285	0/0:2,0:2:6.02:0,6,226
chr10	18507508	.	T	TC	251.72	PASS	AB=0.863;AC=8;AF=0.143;AN=56;BaseQRankSum=0.389;DP=321;FS=6.295;HRun=0;HaplotypeScore=108.5742;InbreedingCoeff=-0.1581;MQ=54.54;MQ0=0;MQRankSum=-4.938;QD=2.42;ReadPosRankSum=0.463;VQSLOD=1.9679;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:10,2:12:38.01:38,0,147	0/0:3,0:3:9:0,9,91	0/0:13,0:11:31.91:0,32,386	0/0:4,0:3:9.03:0,9,111	0/0:13,5:18:16.10:0,16,224	0/0:5,1:6:15.04:0,15,162	0/0:21,0:21:46.88:0,47,508	0/0:14,0:14:36.09:0,36,389	0/0:5,1:6:15.02:0,15,147	0/1:12,6:18:99:107,0,305	0/0:11,3:14:21.66:0,22,298	0/0:13,0:13:39.10:0,39,428	0/1:11,4:15:7.48:7,0,313	0/0:9,1:10:23.41:0,23,281	0/0:11,0:11:33.08:0,33,351	0/0:8,0:8:20.54:0,21,204	0/1:13,0:13:0.42:0,0,239	0/0:7,0:7:9.01:0,9,85	0/1:3,0:3:5.40:5,0,24	0/0:12,1:13:36.07:0,36,382	0/1:9,0:9:2.16:2,0,198	0/0:10,5:15:27.05:0,27,274	0/0:11,3:14:33.08:0,33,354	0/0:10,0:10:24.92:0,25,250	0/0:10,2:12:30.54:0,31,317	0/1:9,6:15:99:150,0,187	0/1:14,5:19:58.66:59,0,345	0/0:5,0:5:0.68:0,1,97
chr10	18508114	.	G	GCC	5954.81	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-9.824;DP=582;FS=8.416;HRun=8;HaplotypeScore=73.9065;InbreedingCoeff=0.9912;MQ=65.71;MQ0=1;MQRankSum=-1.023;QD=30.38;ReadPosRankSum=-0.554;VQSLOD=4.3021;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:9,24:35:57.19:905,57,0	0/0:8,0:8:24.06:0,24,267	0/0:16,0:17:44.22:0,44,440	0/0:24,0:23:28.58:0,29,288	0/0:22,0:22:45.01:0,45,492	1/1:4,10:15:27.09:410,27,0	1/1:5,23:31:73.71:1071,74,0	0/0:15,0:15:39.10:0,39,434	0/0:21,0:21:57.13:0,57,635	0/0:19,0:19:48.12:0,48,535	0/0:13,0:13:30.06:0,30,334	1/1:4,16:20:48.16:762,48,0	0/0:16,0:16:45.10:0,45,491	0/0:25,0:25:67.34:0,67,756	1/1:5,27:32:69.71:1093,70,0	1/1:2,8:10:21.07:333,21,0	0/0:39,0:39:99:0,108,1168	1/1:2,25:28:57.19:905,57,0	0/0:21,0:21:57.14:0,57,633	0/0:13,0:13:33.07:0,33,368	0/0:37,0:37:93.18:0,93,1015	1/1:5,7:12:11.97:190,12,0	0/0:17,0:17:51.11:0,51,556	0/0:29,0:30:69.11:0,69,827	1/1:3,8:11:18.06:286,18,0	0/0:25,0:25:51.10:0,51,568	0/0:16,0:16:39.06:0,39,425	0/0:8,0:8:18.04:0,18,200
chr10	18508220	.	A	AG	1405.22	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-6.052;DP=584;FS=1.414;HRun=0;HaplotypeScore=60.0598;InbreedingCoeff=0.9623;MQ=69.62;MQ0=0;MQRankSum=-3.596;QD=33.46;ReadPosRankSum=1.523;VQSLOD=3.3111;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,38:42:96.26:1500,96,0	0/0:8,0:8:24.07:0,24,320	0/0:18,0:18:54.07:0,54,649	0/0:24,0:23:66.22:0,66,916	0/0:13,0:13:36.12:0,36,503	0/0:15,0:15:42.09:0,42,509	0/0:29,0:29:87.28:0,87,1200	0/0:16,0:16:48.15:0,48,642	0/0:31,0:31:87.28:0,87,1198	0/0:31,0:31:84.25:0,84,1105	0/0:9,0:9:24.06:0,24,305	0/0:13,0:13:39.12:0,39,528	0/0:14,0:14:42.14:0,42,586	0/0:21,0:21:63.17:0,63,859	0/0:26,0:26:78.25:0,78,1061	0/0:14,0:14:39.13:0,39,545	0/0:36,0:36:99:0,105,1468	0/0:34,0:34:99:0,99,1348	0/0:20,0:20:57.10:0,57,729	0/0:17,0:17:51.15:0,51,681	0/0:51,0:51:99:0,147,1970	0/0:13,0:13:39.12:0,39,516	0/0:12,0:12:34.88:0,35,445	0/0:23,1:24:21.26:0,21,851	0/0:13,0:13:36.03:0,36,444	0/0:17,0:17:48.14:0,48,622	0/0:19,0:19:57.19:0,57,797	0/0:4,0:4:12.04:0,12,168
chr10	18508363	.	TGGG	T	7052.16	PASS	AB=1.000;AC=39;AF=0.696;AN=56;BaseQRankSum=2.410;DP=504;FS=0.463;HRun=11;HaplotypeScore=104.6292;InbreedingCoeff=0.8882;MQ=74.46;MQ0=1;MQRankSum=-2.043;QD=20.62;ReadPosRankSum=8.006;VQSLOD=2.6112;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:54.08:0,54,869	0/1:14,0:14:15.09:146,0,15	0/0:23,0:17:24.50:0,25,272	0/0:16,0:11:17.31:0,17,205	1/1:15,0:15:30:279,30,0	1/1:4,16:20:42.11:552,42,0	1/1:5,22:27:57.16:749,57,0	0/0:16,0:24:30.12:0,30,281	0/0:12,0:15:31.31:0,31,505	1/1:16,0:16:41.62:313,42,0	1/1:12,0:12:32.97:287,33,0	1/1:1,23:25:49.59:667,50,0	1/1:19,0:19:11.91:298,12,0	1/1:15,0:15:34.21:285,34,0	1/1:3,16:19:39.10:512,39,0	1/1:3,6:9:15.03:197,15,0	1/1:28,0:28:55.12:448,55,0	1/1:3,11:14:27.09:355,27,0	0/0:6,0:17:32.87:0,33,253	0/0:5,0:10:8.92:0,9,63	0/0:9,0:25:52.11:0,52,438	1/1:6,8:13:20.99:256,21,0	1/1:18,0:18:29.21:264,29,0	1/1:16,0:16:38.91:324,39,0	1/1:5,9:14:30.07:390,30,0	1/1:21,0:21:35.19:282,35,0	1/1:21,0:21:44.92:378,45,0	1/1:5,0:5:8.96:71,9,0
chr10	18508372	.	GGGT	G	8161.69	PASS	AB=0.976;AC=33;AF=0.589;AN=56;BaseQRankSum=0.147;DP=485;FS=0.000;HRun=0;HaplotypeScore=99.2058;InbreedingCoeff=0.5368;MQ=69.27;MQ0=2;MQRankSum=-1.992;QD=24.88;ReadPosRankSum=11.364;VQSLOD=3.6281;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:66.06:0,66,1166	1/1:0,12:12:23.77:336,24,0	0/0:19,0:11:21.47:0,21,261	0/0:17,0:9:12.63:0,13,177	1/1:0,13:13:33.03:501,33,0	0/1:21,0:21:63.86:161,0,64	0/1:30,0:30:99:256,0,109	0/0:26,0:25:65.41:0,65,649	0/0:15,0:15:37.30:0,37,633	1/1:2,13:15:45.11:662,45,0	1/1:2,10:12:33.11:522,33,0	0/1:29,0:29:39.91:299,0,40	1/1:1,16:17:42.06:643,42,0	1/1:0,16:16:36.08:554,36,0	1/1:16,0:16:37.08:219,37,0	0/1:7,0:7:10.67:56,0,11	1/1:0,27:27:60.12:915,60,0	0/1:16,0:16:9.64:97,0,10	0/0:19,0:19:57.08:0,57,585	0/0:9,0:9:14.19:0,14,133	0/0:28,0:28:73.43:0,73,784	0/1:9,1:9:0.04:121,0,0	1/1:1,16:17:29.54:480,30,0	1/1:0,16:16:39.13:628,39,0	0/1:11,1:12:2.64:175,0,3	1/1:2,15:17:47.91:666,48,0	1/1:2,20:22:45.15:725,45,0	1/1:0,3:3:9.03:146,9,0
chr10	18508373	.	GGTT	G	3559.84	PASS	AB=1.000;AC=27;AF=0.482;AN=56;BaseQRankSum=2.614;DP=492;FS=6.127;HRun=0;HaplotypeScore=117.3211;InbreedingCoeff=0.7495;MQ=67.77;MQ0=2;MQRankSum=-0.373;QD=14.96;ReadPosRankSum=8.554;VQSLOD=2.2165;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:72.22:0,72,1364	1/1:12,0:12:19.35:153,19,0	0/0:20,0:11:20.98:0,21,269	0/0:15,0:8:14.33:0,14,140	1/1:13,0:13:11.18:250,11,0	0/0:21,0:21:44.86:0,45,380	0/0:30,0:30:41.65:0,42,490	0/0:28,0:27:73.94:0,74,1017	0/0:14,0:15:38.79:0,39,675	1/1:15,0:15:38.56:277,39,0	1/1:10,2:12:32.94:313,33,0	0/1:30,0:30:12.79:13,0,272	1/1:16,0:17:39.37:337,39,0	1/1:16,0:16:33.39:282,33,0	0/0:16,0:16:15.50:0,16,94	0/0:7,0:7:15.74:0,16,106	1/1:27,0:27:54.84:449,55,0	0/0:19,0:19:36.09:0,36,309	0/0:19,0:19:57.14:0,57,725	0/0:10,0:10:4.51:0,5,241	0/0:27,0:28:74.98:0,75,934	0/1:10,0:9:38.77:39,0,56	1/1:16,0:16:29.95:290,30,0	1/1:16,0:16:38.90:314,39,0	0/1:12,0:12:26.96:27,0,132	1/1:15,2:17:32.43:331,32,0	1/1:20,2:22:44.94:411,45,0	1/1:3,0:3:8.99:74,9,0
chr10	18509168	.	TACAC	T	462.57	PASS	AB=0.967;AC=16;AF=0.320;AN=50;BaseQRankSum=3.072;DP=476;FS=0.000;HRun=0;HaplotypeScore=83.8832;InbreedingCoeff=0.4766;MQ=64.68;MQ0=17;MQRankSum=-0.488;QD=2.79;ReadPosRankSum=-0.336;VQSLOD=1.1665;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:21:11.88:0,12,119	0/0:3,0:3:0:0,0,0	./.	./.	0/0:14,0:14:8.99:0,9,76	0/1:16,1:17:16.72:81,0,17	1/1:22,0:23:3:28,3,0	./.	0/0:14,0:16:11.75:0,12,174	0/0:14,0:14:11.86:0,12,135	0/0:15,0:15:11.99:0,12,142	1/1:12,1:13:9.02:115,9,0	0/0:11,0:11:13.23:0,13,111	0/1:11,0:11:1.57:2,0,108	1/1:17,1:21:12.02:148,12,0	1/1:19,1:19:9.02:105,9,0	0/0:18,0:18:21.53:0,22,322	1/1:17,4:20:5.46:88,5,0	1/1:11,0:10:3.01:31,3,0	0/1:11,0:12:0.11:0,0,49	0/0:38,0:37:10.53:0,11,90	0/1:15,0:14:11:16,0,11	0/0:8,0:8:8.97:0,9,137	0/0:16,0:21:21.07:0,21,307	0/0:16,0:15:2.97:0,3,25	0/0:11,0:11:4.56:0,5,126	0/0:21,0:21:18.05:0,18,275	0/0:9,0:9:15:0,15,221
chr10	18510585	.	G	GTCA	930.55	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-6.553;DP=510;FS=0.928;HRun=0;HaplotypeScore=100.0067;InbreedingCoeff=0.7674;MQ=74.97;MQ0=2;MQRankSum=-1.509;QD=28.20;ReadPosRankSum=1.168;VQSLOD=3.8459;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,25:33:51.17:1025,51,0	0/0:7,0:7:9.03:0,9,126	0/0:31,0:27:32.09:0,32,363	0/0:25,0:25:26.83:0,27,300	0/0:20,0:20:51.11:0,51,666	0/0:14,0:14:30.09:0,30,402	0/0:19,0:19:51.09:0,51,659	0/0:25,0:25:54.17:0,54,743	0/0:23,0:25:57.07:0,57,737	0/0:22,0:22:2.36:0,2,588	0/0:24,0:24:42.14:0,42,590	0/0:8,0:8:18.05:0,18,234	0/0:22,0:22:51.10:0,51,657	0/0:15,0:14:36.03:0,36,462	0/0:20,0:20:39.13:0,39,549	0/0:20,0:20:51.13:0,51,697	0/0:14,0:14:33.04:0,33,417	0/0:13,0:13:27.05:0,27,354	0/0:18,0:18:27.07:0,27,346	0/0:14,0:14:33.10:0,33,447	0/0:19,0:19:45.04:0,45,571	0/0:11,0:11:24.06:0,24,319	0/0:16,0:16:33.11:0,33,465	0/0:15,0:15:27.07:0,27,440	0/0:10,0:10:27.06:0,27,357	0/0:21,0:21:45.01:0,45,619	0/0:22,0:22:45.15:0,45,633	0/0:7,0:7:12.04:0,12,168
chr10	18512667	.	G	GAACATAGGCA	63098.65	PASS	AB=0.600;AC=49;AF=0.875;AN=56;BaseQRankSum=-7.400;DP=610;FS=0.516;HRun=0;HaplotypeScore=150.7915;InbreedingCoeff=0.8102;MQ=73.11;MQ0=0;MQRankSum=-12.030;QD=115.57;ReadPosRankSum=2.893;VQSLOD=5.6225;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:14,18:35:75.26:3776,75,0	1/1:3,10:14:39.13:1968,39,0	0/0:16,0:16:39.13:0,39,1101	0/0:20,0:21:54.62:0,55,1415	1/1:7,14:22:54.06:2415,54,0	1/1:9,12:26:57.20:2752,57,0	1/1:15,13:29:78.27:3582,78,0	1/1:20,6:34:84.26:3303,84,0	0/0:27,0:27:78.27:0,78,2330	1/1:11,16:32:90.26:4096,90,0	1/1:4,3:7:15.05:707,15,0	1/1:5,14:21:48.64:2466,49,0	1/1:8,17:29:69.24:3446,69,0	1/1:6,13:23:57.20:2769,57,0	1/1:9,12:21:51.17:2491,51,0	0/1:8,14:24:12.04:2673,0,12	1/1:10,16:28:72.25:3690,72,0	1/1:7,9:18:45.15:2178,45,0	1/1:6,8:15:42.14:1978,42,0	1/1:10,11:22:60.20:2671,60,0	1/1:11,6:20:27.09:1355,27,0	1/1:7,10:19:45.11:2174,45,0	1/1:10,10:22:45.15:2216,45,0	1/1:5,4:13:18.06:919,18,0	1/1:4,17:21:60.21:3061,60,0	1/1:12,21:34:90.31:4366,90,0	1/1:4,9:14:39.11:1842,39,0	1/1:3,0:3:6.02:203,6,0
chr10	18513323	.	T	TCTTC	17459.80	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-13.048;DP=720;FS=5.591;HRun=0;HaplotypeScore=118.8628;InbreedingCoeff=0.9988;MQ=82.06;MQ0=2;MQRankSum=-4.653;QD=64.19;ReadPosRankSum=1.313;VQSLOD=7.1543;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,117,2048	1/1:2,13:15:39.13:1027,39,0	0/0:22,0:22:44.29:0,44,760	0/0:19,0:19:48.09:0,48,764	1/1:1,22:22:63.13:1539,63,0	0/0:14,0:14:42.14:0,42,765	0/0:31,0:31:87.23:0,87,1464	0/0:44,0:44:99:0,123,2194	0/0:30,0:30:78.22:0,78,1344	1/1:5,21:28:75.25:1876,75,0	1/1:1,17:19:51.09:1283,51,0	0/0:37,0:37:99:0,108,1886	1/1:0,23:26:69.24:1794,69,0	1/1:4,18:26:60.14:1484,60,0	0/0:26,0:26:75.24:0,75,1336	0/0:16,0:16:45.14:0,45,791	1/1:6,23:30:69.19:1753,69,0	0/0:31,0:31:87.24:0,87,1521	0/0:17,0:17:42.12:0,42,710	0/0:12,0:12:36.11:0,36,632	0/0:47,0:47:99:0,132,2342	0/0:29,0:29:81.28:0,81,1471	1/1:1,12:13:35.99:809,36,0	1/1:4,24:28:75.26:1954,75,0	0/0:34,0:34:93.29:0,93,1638	1/1:6,23:29:78.27:1980,78,0	1/1:1,23:25:57.20:1491,57,0	1/1:1,7:7:18.06:470,18,0
chr10	18516241	.	GAGAGAC	G	3882.31	PASS	AB=1.000;AC=42;AF=0.750;AN=56;BaseQRankSum=-2.713;DP=567;FS=3.153;HRun=0;HaplotypeScore=144.2170;InbreedingCoeff=0.1125;MQ=42.91;MQ0=18;MQRankSum=1.835;QD=9.01;ReadPosRankSum=-0.858;VQSLOD=2.3728;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:23:16.34:16,0,67	1/1:6,1:7:17.19:173,17,0	0/0:47,0:5:2.12:0,2,49	0/0:73,0:5:7.83:0,8,84	1/1:17,1:18:5.51:29,6,0	0/1:24,0:23:15.16:98,0,15	0/1:16,0:16:38.94:83,0,39	1/1:30,0:28:43.09:364,43,0	0/0:15,0:15:26.79:0,27,824	1/1:21,0:21:38.37:342,38,0	1/1:13,0:12:19.76:134,20,0	0/1:17,0:17:82.55:92,0,83	1/1:12,0:12:22.04:162,22,0	1/1:15,1:16:5.69:79,6,0	0/1:24,0:22:0.02:129,0,0	0/1:14,0:14:30.10:102,0,30	1/1:21,0:21:40.22:285,40,0	1/1:5,0:5:7.41:60,7,0	0/1:21,0:18:50.51:145,0,51	1/1:15,0:15:2.91:25,3,0	1/1:18,0:17:11.94:106,12,0	0/1:17,0:16:28.33:28,0,60	1/1:16,0:15:10.78:73,11,0	1/1:24,0:24:16.36:120,16,0	1/1:17,0:17:12.84:243,13,0	1/1:16,6:22:58.09:887,58,0	1/1:10,0:10:2.08:10,2,0	1/1:8,0:8:7.34:98,7,0
chr10	18516243	.	GAGAC	G	5190.23	PASS	AB=1.000;AC=45;AF=0.804;AN=56;BaseQRankSum=-2.164;DP=563;FS=1.539;HRun=0;HaplotypeScore=130.7556;InbreedingCoeff=0.2647;MQ=43.07;MQ0=19;MQRankSum=1.798;QD=11.99;ReadPosRankSum=-0.620;VQSLOD=4.4041;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:23:21.47:40,0,21	1/1:7,1:8:17.87:182,18,0	0/0:45,0:5:2.12:0,2,54	0/0:70,0:5:8.03:0,8,61	1/1:3,15:18:5.85:75,6,0	1/1:24,0:23:15.82:132,16,0	0/1:16,0:16:8.83:118,0,9	1/1:29,0:27:45.70:395,46,0	0/0:15,0:15:14.05:0,14,642	1/1:17,2:19:41.52:487,42,0	1/1:9,4:12:23.89:248,24,0	0/1:18,0:18:10.38:115,0,10	1/1:2,10:12:23.97:405,24,0	1/1:1,16:17:6.02:91,6,0	1/1:23,0:21:11.43:161,11,0	1/1:14,0:14:16.42:150,16,0	1/1:12,9:21:48:658,48,0	1/1:5,0:5:11.42:71,11,0	0/1:20,0:17:32.39:140,0,32	1/1:17,0:17:2.37:25,2,0	1/1:18,0:17:11.94:102,12,0	0/1:17,0:16:33.37:43,0,33	1/1:14,2:15:17.58:172,18,0	1/1:3,21:24:18.06:314,18,0	1/1:17,0:17:22.62:253,23,0	1/1:24,0:24:66.31:612,66,0	1/1:1,9:10:2.75:56,3,0	1/1:8,0:8:14.20:146,14,0
chr10	18516245	.	GAC	G	4374.63	PASS	AB=0.869;AC=47;AF=0.839;AN=56;BaseQRankSum=-0.669;DP=556;FS=0.000;HRun=0;HaplotypeScore=123.1231;InbreedingCoeff=0.4548;MQ=44.47;MQ0=19;MQRankSum=1.859;QD=10.13;ReadPosRankSum=-0.672;VQSLOD=4.2932;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:25,1:24:0.31:22,0,0	1/1:8,0:8:17.94:142,18,0	0/0:41,0:4:2.12:0,2,67	0/0:68,0:6:8.22:0,8,62	1/1:18,0:18:5.82:41,6,0	1/1:22,2:23:20.44:150,20,0	1/1:15,1:16:12.97:135,13,0	1/1:29,0:27:42.65:412,43,0	0/0:14,0:14:14.05:0,14,488	1/1:21,0:21:49.46:453,49,0	1/1:13,0:11:23.74:181,24,0	1/1:18,0:18:23.96:188,24,0	1/1:12,0:12:23.84:175,24,0	1/1:17,0:17:5.96:44,6,0	1/1:23,0:21:25.17:195,25,0	1/1:14,0:14:22.99:166,23,0	1/1:20,1:21:47.68:360,48,0	1/1:4,1:5:14.89:126,15,0	0/1:9,11:17:24.80:186,0,25	1/1:17,0:17:5.84:43,6,0	1/1:17,0:16:11.93:101,12,0	0/1:16,0:15:7.53:41,0,8	1/1:16,0:15:20.84:156,21,0	1/1:23,0:23:17.93:136,18,0	1/1:17,0:17:25.76:256,26,0	1/1:24,1:25:68.27:550,68,0	1/1:10,0:10:2.99:23,3,0	1/1:6,0:6:11.53:93,12,0
chr10	18516259	.	G	GACAGAC	136.12	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=1.241;DP=558;FS=0.000;HRun=0;HaplotypeScore=170.0373;InbreedingCoeff=0.1622;MQ=48.02;MQ0=18;MQRankSum=-4.102;QD=1.53;ReadPosRankSum=0.273;VQSLOD=2.6204;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,13:27:3.73:111,4,0	0/0:7,0:7:15.88:0,16,202	0/0:17,0:2:6.02:0,6,96	0/0:66,0:12:17.35:0,17,210	0/0:16,0:16:9.50:0,10,151	0/0:27,0:26:3.53:0,4,285	0/0:17,0:17:17.83:0,18,165	0/1:30,0:28:62.08:62,0,387	0/0:10,0:10:30.07:0,30,616	0/0:22,0:22:60.06:0,60,811	0/0:13,0:11:24.06:0,24,334	0/0:21,0:21:34.62:0,35,266	0/0:14,0:14:30.10:0,30,539	0/0:22,0:22:21.03:0,21,301	0/0:22,0:20:20.54:0,21,258	0/1:17,0:17:12.26:12,0,259	0/0:22,0:22:50.83:0,51,726	0/0:5,0:5:12.01:0,12,148	0/1:13,0:12:61.17:61,0,99	0/0:21,0:21:10.16:0,10,92	0/0:22,0:21:12.97:0,13,155	0/0:19,0:18:23.88:0,24,186	0/0:15,0:14:21:0,21,210	0/0:25,0:25:20.78:0,21,357	0/0:21,0:20:41.67:0,42,420	0/0:24,0:24:69.34:0,69,868	0/0:10,0:10:8.91:0,9,114	0/0:7,0:7:18.01:0,18,201
chr10	18516271	.	G	GAC	312.10	PASS	AB=0.946;AC=8;AF=0.143;AN=56;BaseQRankSum=5.052;DP=541;FS=1.634;HRun=0;HaplotypeScore=142.9073;InbreedingCoeff=0.3421;MQ=56.21;MQ0=12;MQRankSum=-6.011;QD=3.00;ReadPosRankSum=-0.340;VQSLOD=2.4789;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:18:2.50:15,3,0	0/0:7,0:7:15.42:0,15,206	0/0:26,0:8:9.84:0,10,143	0/0:57,0:19:20.54:0,21,237	0/0:18,0:18:17.89:0,18,250	0/0:27,0:26:29.40:0,29,388	0/1:13,5:18:98.20:98,0,138	0/1:18,0:16:54.89:91,0,55	0/0:8,0:8:24.05:0,24,323	0/0:22,0:22:62.66:0,63,820	0/0:15,0:13:27.08:0,27,387	0/0:22,0:22:48.38:0,48,587	0/0:16,0:16:36.08:0,36,501	0/0:20,0:20:21.02:0,21,293	0/0:22,0:20:18:0,18,184	0/0:21,0:21:42.93:0,43,470	0/0:21,0:21:47.98:0,48,605	0/0:7,0:7:17.96:0,18,176	1/1:12,0:11:29.68:216,30,0	0/1:18,0:18:5.82:6,0,18	0/1:19,0:18:18.74:20,0,19	0/0:19,0:18:26.99:0,27,331	0/0:17,0:16:26.55:0,27,353	0/0:23,0:23:18.06:0,18,274	0/0:25,0:24:54.07:0,54,619	0/0:25,0:25:68.69:0,69,802	0/0:12,0:12:21.01:0,21,243	0/0:7,0:7:19.46:0,19,154
chr10	18517218	.	CTCTATCTA	C	2961.36	PASS	AC=22;AF=0.458;AN=48;BaseQRankSum=4.772;DP=621;FS=1.390;HRun=0;HaplotypeScore=165.0112;InbreedingCoeff=0.8234;MQ=72.13;MQ0=6;MQRankSum=-3.966;QD=11.57;ReadPosRankSum=0.826;VQSLOD=2.9280;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:28:2.89:87,3,0	1/1:8,6:14:17.99:402,18,0	./.	./.	1/1:11,9:20:15.05:301,15,0	0/0:13,0:17:2.99:0,3,24	0/0:18,0:18:3:0,3,25	./.	1/1:16,6:22:6.02:146,6,0	1/1:18,0:23:9.02:132,9,0	0/0:11,0:15:8.98:0,9,73	0/0:28,0:28:27.09:0,27,929	0/0:14,0:14:27.09:0,27,1025	1/1:17,17:34:30.10:694,30,0	0/0:26,0:26:12.04:0,12,460	0/0:12,0:22:8.04:0,8,315	./.	0/0:22,0:24:24.08:0,24,868	1/1:11,0:17:17.52:141,18,0	0/0:14,0:23:23.96:0,24,226	1/1:22,0:21:2.98:8,3,0	0/0:12,0:17:18:0,18,199	0/0:22,0:22:24.04:0,24,860	0/0:16,0:22:20.93:0,21,165	0/0:34,0:34:57.20:0,57,2152	1/1:22,9:31:28.12:539,28,0	1/1:15,6:21:12.04:292,12,0	1/1:16,8:24:21.07:407,21,0
chr10	18518082	.	A	ATGCT	6457.31	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-4.959;DP=505;FS=5.606;HRun=0;HaplotypeScore=93.3098;InbreedingCoeff=0.9886;MQ=94.36;MQ0=0;MQRankSum=-10.722;QD=62.69;ReadPosRankSum=-3.821;VQSLOD=5.6922;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,18:22:54.19:1410,54,0	0/0:10,0:10:30.10:0,30,593	0/0:21,0:21:51.07:0,51,909	0/0:28,0:28:70.79:0,71,1278	0/0:18,0:18:51.16:0,51,984	0/0:15,0:15:45.14:0,45,864	0/0:25,0:25:69.23:0,69,1344	1/1:6,8:14:36.12:1004,36,0	0/0:21,0:21:63.22:0,63,1249	0/0:18,0:18:54.17:0,54,1010	0/0:9,0:9:21.07:0,21,409	0/0:22,0:22:57.20:0,57,1138	0/0:13,0:13:39.13:0,39,744	0/0:23,0:23:69.23:0,69,1341	0/0:18,0:18:42.14:0,42,839	0/0:14,0:14:42.12:0,42,765	0/0:27,0:27:81.28:0,81,1617	0/0:23,0:23:63.20:0,63,1202	1/1:8,9:18:54.12:1284,54,0	1/1:3,5:9:18.02:356,18,0	1/1:7,33:40:96.28:2403,96,0	0/0:8,0:8:21.07:0,21,419	0/0:9,0:9:27.08:0,27,492	0/0:23,0:23:63.22:0,63,1258	0/0:11,0:11:30.10:0,30,599	0/0:17,0:17:51.17:0,51,972	0/0:25,0:24:75.25:0,75,1462	0/0:4,0:4:12.04:0,12,239
chr10	18518886	.	GA	G	9988.39	PASS	AC=50;AF=1.000;AN=50;DP=319;FS=0.000;HRun=3;HaplotypeScore=307.9747;InbreedingCoeff=-0.0089;MQ=28.78;MQ0=0;QD=31.51;VQSLOD=3.1728;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,6:8:11.99:131,12,0	1/1:1,9:10:24.02:278,24,0	./.	./.	1/1:2,20:22:48.07:573,48,0	1/1:1,6:7:18.06:222,18,0	1/1:0,9:9:21.07:260,21,0	1/1:1,20:21:60.19:743,60,0	1/1:0,16:16:45.10:539,45,0	1/1:0,17:17:51.16:631,51,0	1/1:1,21:22:48.07:572,48,0	1/1:0,13:13:36.08:428,36,0	1/1:0,6:6:18.06:222,18,0	1/1:1,5:6:15.05:185,15,0	1/1:0,9:9:27.08:334,27,0	1/1:0,7:7:21.07:260,21,0	1/1:1,7:8:15.05:186,15,0	1/1:0,4:4:12.04:149,12,0	1/1:0,7:7:21.07:259,21,0	1/1:0,18:18:48.02:571,48,0	1/1:1,2:3:6.02:74,6,0	1/1:0,17:15:42.13:519,42,0	1/1:1,22:23:51.16:623,51,0	./.	1/1:0,20:20:54.17:668,54,0	1/1:0,19:19:57.18:705,57,0	1/1:1,16:16:45.14:557,45,0	1/1:0,8:8:24.08:297,24,0
chr10	18518900	.	AG	A	4058.63	PASS	AB=0.667;AC=53;AF=0.946;AN=56;BaseQRankSum=2.731;DP=316;FS=3.629;HRun=4;HaplotypeScore=308.4555;InbreedingCoeff=0.3742;MQ=40.35;MQ0=0;MQRankSum=-1.749;QD=12.93;ReadPosRankSum=2.337;VQSLOD=1.7004;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,4:5:11.47:77,11,0	1/1:0,8:8:21.58:92,22,0	0/1:1,1:2:0.86:23,0,1	0/0:2,0:2:4.78:0,5,25	1/1:0,19:19:44.55:205,45,0	1/1:0,6:6:16.43:74,16,0	1/1:2,8:9:13.99:84,14,0	1/1:3,16:19:44.25:307,44,0	1/1:1,12:13:0.41:140,0,0	1/1:2,15:17:43.60:284,44,0	1/1:3,17:20:29.32:189,29,0	1/1:1,12:13:30.87:182,31,0	1/1:0,7:7:19.41:87,19,0	1/1:0,8:8:22.28:104,22,0	1/1:1,8:9:22.38:121,22,0	1/1:1,6:7:16.84:98,17,0	1/1:1,6:7:10.97:48,11,0	1/1:0,3:3:8.79:53,9,0	1/1:0,8:8:23.40:190,23,0	1/1:2,18:20:46.80:188,47,0	1/1:0,2:2:6.02:72,6,0	1/1:1,17:16:37.40:215,37,0	1/1:1,24:25:41.26:241,41,0	1/1:0,2:2:2.84:14,3,0	1/1:0,18:18:46.58:202,47,0	1/1:2,17:19:49.42:323,49,0	1/1:1,17:17:44.12:237,44,0	1/1:0,11:11:31.75:208,32,0
chr10	18518907	.	G	GA	6374.18	PASS	AC=52;AF=0.963;AN=54;BaseQRankSum=1.124;DP=341;FS=2.649;HRun=1;HaplotypeScore=323.7104;InbreedingCoeff=0.3880;MQ=46.11;MQ0=0;MQRankSum=0.486;QD=18.97;ReadPosRankSum=-0.082;VQSLOD=3.7198;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,3:5:8.96:68,9,0	1/1:0,9:9:26.73:185,27,0	1/1:2,2:4:9.02:112,9,0	0/0:3,0:3:0.09:0,0,33	1/1:2,22:24:58.47:378,58,0	1/1:0,8:8:20.86:169,21,0	1/1:1,7:7:11.93:88,12,0	1/1:4,15:19:53.88:522,54,0	1/1:3,12:15:7.84:224,8,0	1/1:2,14:16:44.99:408,45,0	1/1:2,16:18:38.19:251,38,0	1/1:1,14:15:32.82:281,33,0	1/1:0,8:8:20.88:168,21,0	1/1:0,9:9:26.86:221,27,0	1/1:1,7:8:20.85:150,21,0	1/1:1,7:8:17.90:152,18,0	1/1:1,5:6:11.90:84,12,0	1/1:1,3:4:11.60:89,12,0	1/1:3,7:10:29.99:296,30,0	1/1:2,20:22:62.16:442,62,0	./.	1/1:4,17:19:38.41:263,38,0	1/1:2,26:28:54.74:368,55,0	1/1:0,2:2:3:25,3,0	1/1:0,20:20:53.11:337,53,0	1/1:5,14:19:53.81:425,54,0	1/1:1,17:17:50.68:400,51,0	1/1:0,12:12:29.94:268,30,0
chr10	18518951	.	C	CA	3748.85	PASS	AB=0.800;AC=53;AF=0.946;AN=56;BaseQRankSum=3.808;DP=320;FS=1.219;HRun=1;HaplotypeScore=263.8484;InbreedingCoeff=0.2265;MQ=63.25;MQ0=0;MQRankSum=-3.711;QD=12.05;ReadPosRankSum=0.936;VQSLOD=2.4315;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:4:10.84:47,11,0	1/1:8,0:8:18.27:78,18,0	0/1:6,2:8:71.70:72,0,76	0/0:9,0:9:1.53:0,2,51	1/1:23,2:25:54.58:294,55,0	1/1:11,1:12:32.84:189,33,0	1/1:6,0:5:13.31:59,13,0	1/1:6,0:6:10.84:51,11,0	1/1:9,0:9:19.58:116,20,0	1/1:14,2:15:34.78:207,35,0	1/1:17,0:17:3.35:104,3,0	1/1:14,0:14:33.42:177,33,0	1/1:9,1:10:22.28:124,22,0	1/1:10,0:10:27.69:132,28,0	1/1:8,2:10:24.50:152,24,0	1/1:6,2:7:19.32:101,19,0	1/1:2,0:2:3.01:37,3,0	1/1:2,0:2:5.49:25,5,0	1/1:4,0:4:8.72:50,9,0	1/1:28,0:28:67.62:312,68,0	1/1:1,0:1:2.60:10,3,0	1/1:20,3:23:57.44:303,57,0	1/1:25,1:26:55.87:286,56,0	1/1:1,0:1:2.74:12,3,0	1/1:17,0:17:42.97:204,43,0	1/1:19,0:18:47.07:234,47,0	1/1:13,3:16:40.80:258,41,0	1/1:9,0:9:24.43:115,24,0
chr10	18519068	.	CA	C	10533.68	PASS	AC=52;AF=1.000;AN=52;DP=284;FS=0.000;HRun=1;HaplotypeScore=194.2778;InbreedingCoeff=-0.0188;MQ=35.61;MQ0=0;QD=37.22;VQSLOD=4.1266;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,15:14:33.11:460,33,0	1/1:0,9:9:27.09:376,27,0	1/1:0,2:2:6.02:84,6,0	./.	1/1:0,19:19:45.15:627,45,0	1/1:0,10:10:30.10:419,30,0	1/1:0,9:9:21.07:293,21,0	1/1:0,16:13:36.12:503,36,0	1/1:0,7:7:21.07:293,21,0	1/1:0,16:15:45.15:628,45,0	1/1:0,11:11:24.08:335,24,0	1/1:0,12:12:36.12:502,36,0	1/1:0,9:9:27.09:376,27,0	1/1:0,14:14:39.13:543,39,0	1/1:0,10:10:30.10:418,30,0	1/1:0,6:6:18.06:251,18,0	1/1:0,4:4:9.03:126,9,0	1/1:0,2:2:6.02:84,6,0	1/1:0,2:2:6.02:84,6,0	1/1:0,19:19:51.17:711,51,0	1/1:0,10:10:24.08:334,24,0	1/1:0,9:9:24.08:335,24,0	1/1:0,15:14:36.12:496,36,0	./.	1/1:0,21:20:60.20:836,60,0	1/1:1,19:20:57.19:792,57,0	1/1:0,14:14:39.13:544,39,0	1/1:0,2:2:6.02:84,6,0
chr10	18519116	.	CTT	C	8142.35	PASS	AB=1.000;AC=54;AF=0.964;AN=56;BaseQRankSum=1.285;DP=268;FS=0.000;HRun=3;HaplotypeScore=161.1065;InbreedingCoeff=-0.0188;MQ=45.11;MQ0=0;MQRankSum=-3.425;QD=30.38;ReadPosRankSum=1.890;VQSLOD=4.1945;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,8:10:18.01:239,18,0	1/1:0,9:9:27.09:402,27,0	0/1:7,0:7:38.33:38,0,80	0/1:5,0:4:11.66:12,0,28	1/1:1,12:14:27.56:385,28,0	1/1:4,5:9:16.81:207,17,0	1/1:2,14:16:29.88:384,30,0	1/1:5,7:12:28.86:383,29,0	1/1:1,10:11:24.08:366,24,0	1/1:0,11:10:30.10:450,30,0	1/1:0,7:7:14.90:176,15,0	1/1:3,8:11:27.09:397,27,0	1/1:1,8:9:24.08:348,24,0	1/1:0,9:9:27.09:411,27,0	1/1:0,13:13:36.12:548,36,0	1/1:2,7:8:15.05:228,15,0	1/1:1,5:6:8.73:110,9,0	1/1:2,1:3:3.01:46,3,0	1/1:0,5:5:12.01:159,12,0	1/1:2,13:15:36.11:507,36,0	1/1:0,15:15:12.04:182,12,0	1/1:0,4:4:12.04:168,12,0	1/1:1,6:7:18.06:273,18,0	1/1:1,7:8:11.97:142,12,0	1/1:3,15:18:42.14:614,42,0	1/1:2,12:14:39.12:575,39,0	1/1:1,8:9:24.08:347,24,0	1/1:0,1:1:3.01:46,3,0
chr10	18520075	.	TAGTGACACAGTGACAC	T	1402.70	PASS	AB=1.000;AC=29;AF=0.659;AN=44;BaseQRankSum=3.473;DP=798;FS=24.485;HRun=0;HaplotypeScore=332.6663;InbreedingCoeff=0.4929;MQ=83.45;MQ0=4;MQRankSum=-0.897;QD=3.46;ReadPosRankSum=2.007;VQSLOD=1.2740;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:69.22:0,69,4183	./.	./.	0/0:44,0:37:0:0,0,0	1/1:15,0:15:3.01:39,3,0	1/1:17,3:20:3.01:77,3,0	1/1:27,0:27:3:27,3,0	./.	0/0:43,0:43:36.12:0,36,2091	1/1:30,0:30:2.80:13,3,0	0/1:18,0:18:0:0,0,0	1/1:25,11:36:9.03:385,9,0	1/1:33,0:33:3.01:39,3,0	1/1:30,0:30:2.04:6,2,0	1/1:30,11:41:6.02:258,6,0	1/1:23,9:32:9.03:387,9,0	1/1:22,0:22:3.01:32,3,0	1/1:21,0:21:6.01:98,6,0	0/0:18,0:16:3.01:0,3,118	0/0:20,0:26:18.05:0,18,320	0/0:53,0:51:12.04:0,12,356	1/1:26,3:29:3.48:116,3,0	./.	./.	1/1:32,0:32:3.01:48,3,0	0/0:34,0:34:3.01:0,3,225	1/1:19,0:19:2.94:18,3,0	./.
chr10	18520715	.	G	GA	938.75	PASS	AB=0.793;AC=6;AF=0.107;AN=56;BaseQRankSum=12.517;DP=1042;FS=161.307;HRun=0;HaplotypeScore=325.5987;InbreedingCoeff=-0.1136;MQ=39.67;MQ0=26;MQRankSum=-8.964;QD=3.83;ReadPosRankSum=1.186;VQSLOD=0.4484;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:55.30:0,55,793	0/1:16,4:20:90.19:90,0,455	0/0:67,0:21:27.51:0,28,595	0/0:72,0:18:47.48:0,47,616	0/0:24,10:34:41.21:0,41,663	0/0:13,0:13:20.08:0,20,200	0/0:26,2:26:10.19:0,10,178	0/0:46,0:39:99:0,105,1459	0/0:43,2:45:49.99:0,50,1246	0/1:59,19:70:99:480,0,1866	0/0:22,11:31:26.97:0,27,455	0/0:15,1:14:29.44:0,29,353	0/0:54,0:54:99:0,126,1756	0/0:50,3:52:88.95:0,89,1368	0/0:17,2:17:28.39:0,28,250	0/0:18,0:16:22.75:0,23,211	0/0:31,0:30:66.19:0,66,920	0/0:16,0:16:35.39:0,35,415	0/0:25,0:20:57.56:0,58,750	0/1:32,14:46:99:111,0,1180	0/0:79,0:76:99:0,148,2075	0/1:22,7:27:1.89:2,0,63	0/0:27,10:37:23.64:0,24,937	0/0:38,0:37:32.24:0,32,439	0/1:14,16:29:32.89:258,0,33	0/1:37,5:41:99:115,0,1164	0/0:25,0:24:48.16:0,48,670	0/0:14,0:14:39.13:0,39,545
chr10	18520769	.	G	GA	4652.87	PASS	AB=0.815;AC=22;AF=0.393;AN=56;BaseQRankSum=16.295;DP=967;FS=274.448;HRun=0;HaplotypeScore=347.4453;InbreedingCoeff=-0.6580;MQ=37.94;MQ0=20;MQRankSum=-10.278;QD=6.63;ReadPosRankSum=2.317;VQSLOD=0.2410;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:20,1:21:30.42:30,0,190	0/1:9,2:11:23.83:24,0,277	0/0:81,5:28:43.22:0,43,782	0/0:75,7:25:4.59:0,5,569	0/0:21,3:23:33.05:0,33,461	0/1:6,1:7:35.93:36,0,45	0/1:28,5:32:53.01:53,0,528	0/1:52,5:51:99:138,0,1132	0/1:38,13:51:99:254,0,892	0/1:47,24:67:99:786,0,966	0/1:23,8:30:87.04:87,0,413	0/1:6,8:13:99:259,0,106	0/1:24,13:38:99:422,0,490	0/1:37,14:47:99:344,0,705	0/1:13,9:20:99:277,0,209	0/1:10,6:14:99:165,0,295	0/1:19,2:20:41.86:42,0,421	0/0:8,0:8:14.78:0,15,180	0/1:32,2:27:49.15:49,0,710	0/1:26,15:41:99:509,0,681	0/0:51,1:51:71.52:0,72,1091	0/1:21,12:31:99:175,0,197	0/1:24,7:29:99:162,0,396	0/1:21,2:23:11.67:12,0,230	0/1:17,10:25:99:447,0,109	0/1:35,12:42:99:343,0,814	0/1:21,1:21:38.62:39,0,531	0/0:9,0:9:27.09:0,27,377
chr10	18520773	.	G	GA	2339.55	PASS	AB=0.836;AC=19;AF=0.339;AN=56;BaseQRankSum=15.140;DP=874;FS=222.980;HRun=0;HaplotypeScore=340.6325;InbreedingCoeff=-0.5185;MQ=37.65;MQ0=18;MQRankSum=-11.127;QD=4.25;ReadPosRankSum=4.324;VQSLOD=-0.2785;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:20,1:21:32.56:33,0,189	0/0:10,2:11:7.30:0,7,339	0/0:67,0:22:20.65:0,21,577	0/0:63,0:21:40.50:0,41,510	0/0:21,2:22:33.03:0,33,444	0/1:6,1:7:21.71:22,0,36	0/1:28,3:30:23.41:23,0,540	0/0:53,0:49:40.87:0,41,1159	0/1:40,7:47:99:159,0,783	0/1:47,12:61:99:234,0,931	0/1:19,4:25:16.42:16,0,387	0/1:6,7:12:99:186,0,104	0/1:29,10:39:99:349,0,470	0/1:45,5:47:99:206,0,684	0/1:15,6:20:99:161,0,210	0/1:11,5:14:97.65:98,0,296	0/1:17,2:18:25.18:25,0,342	0/0:8,0:8:14.88:0,15,181	0/0:24,0:21:46.64:0,47,618	0/1:22,8:31:99:241,0,528	0/0:51,0:50:74.85:0,75,1056	0/1:23,9:30:99:163,0,192	0/1:21,3:23:66.08:66,0,344	0/1:20,2:22:13.75:14,0,191	0/1:17,6:23:86.91:319,0,87	0/1:33,5:37:99:157,0,711	0/1:20,1:20:28.13:28,0,492	0/0:9,0:9:24.08:0,24,334
chr10	18540870	.	CAAACAACCGAGTGGGT	C	7884.95	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=11.653;DP=445;FS=18.635;HRun=0;HaplotypeScore=222.2003;InbreedingCoeff=0.9730;MQ=70.66;MQ0=0;MQRankSum=-10.867;QD=76.55;ReadPosRankSum=3.901;VQSLOD=3.2550;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:63.22:0,63,4424	0/0:5,0:5:15.05:0,15,1116	0/0:7,0:7:21.07:0,21,1330	0/0:12,0:12:33.11:0,33,1558	0/0:33,0:33:99:0,99,6727	1/1:1,16:17:39.13:1858,39,0	1/1:4,11:15:21.07:1006,21,0	0/0:27,0:27:81.28:0,81,5269	0/0:14,0:14:39.12:0,39,2607	0/0:21,0:21:60.21:0,60,4490	0/0:22,0:22:66.23:0,66,4895	1/1:3,12:15:18.06:862,18,0	0/0:18,0:18:51.18:0,51,3730	0/0:15,0:15:45.15:0,45,3202	1/1:1,13:14:18.06:859,18,0	1/1:4,9:13:24.08:1148,24,0	0/0:23,0:23:69.24:0,69,4607	1/1:3,4:7:6.02:287,6,0	0/0:13,0:12:39.13:0,39,2690	0/0:12,0:12:36.12:0,36,2630	0/0:12,0:12:36.12:0,36,2572	1/1:1,9:10:21.07:1005,21,0	0/0:10,0:10:30.10:0,30,2301	0/0:15,0:15:45.15:0,45,3407	1/1:3,9:12:18.06:860,18,0	0/0:21,0:21:63.22:0,63,4476	0/0:19,0:19:54.19:0,54,3727	0/0:22,0:22:66.23:0,66,4724
chr10	18541071	.	TTG	T	625.82	PASS	AB=0.988;AC=24;AF=0.429;AN=56;BaseQRankSum=2.971;DP=392;FS=17.287;HRun=0;HaplotypeScore=84.0287;InbreedingCoeff=-0.3883;MQ=43.15;MQ0=3;MQRankSum=-3.703;QD=2.12;ReadPosRankSum=-0.046;VQSLOD=0.1164;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:34,0:34:34.25:117,0,34	0/1:6,0:6:12.33:12,0,32	0/0:10,0:1:0:0,0,0	0/0:17,0:6:10.87:0,11,69	0/1:23,1:24:22.33:22,0,99	0/1:10,0:9:21.82:28,0,22	0/1:8,0:8:12.76:28,0,13	0/0:20,0:17:36.36:0,36,304	0/0:15,0:15:24.98:0,25,193	0/1:14,0:14:26.53:49,0,27	0/1:18,0:18:44.18:74,0,44	0/1:5,0:5:3.14:16,0,3	1/1:8,1:9:4.09:53,4,0	0/1:10,0:10:20.74:21,0,30	0/1:7,0:7:2.50:3,0,31	0/1:7,0:7:11.16:24,0,11	0/1:20,2:21:7.89:67,0,8	0/1:17,0:16:7.27:7,0,100	0/0:19,0:19:38.22:0,38,270	0/0:16,0:15:20.89:0,21,162	0/1:6,0:6:6.42:6,0,57	0/1:14,1:15:9.44:9,0,116	0/1:17,1:17:17.46:42,0,17	0/1:13,0:13:14.33:14,0,34	0/1:14,0:14:44.86:45,0,60	1/1:15,1:16:2.41:105,2,0	0/1:13,0:13:15.24:15,0,35	0/1:9,0:9:2.42:18,0,2
chr10	18541077	.	CT	C	1805.88	PASS	AB=0.667;AC=35;AF=0.648;AN=54;BaseQRankSum=-3.746;DP=366;FS=6.711;HRun=11;HaplotypeScore=77.7763;InbreedingCoeff=0.3426;MQ=42.11;MQ0=3;MQRankSum=-2.337;QD=6.43;ReadPosRankSum=3.051;VQSLOD=1.9581;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:14,20:34:27.71:231,28,0	1/1:2,4:6:5.97:48,6,0	./.	0/0:10,0:3:3:0,3,27	1/1:11,11:22:19.16:126,19,0	1/1:6,3:7:2.72:23,3,0	0/1:2,5:7:9.79:38,0,10	0/0:10,0:14:28.78:0,29,165	0/0:13,1:15:7.99:0,8,243	1/1:7,6:13:17.84:146,18,0	0/1:12,3:16:2.51:74,0,3	0/1:3,2:5:10.71:17,0,11	1/1:5,4:9:11.80:96,12,0	1/1:4,6:10:11.95:93,12,0	0/1:4,4:8:10.78:17,0,11	0/1:3,4:7:3.09:61,0,3	1/1:12,6:18:10.58:79,11,0	1/1:9,8:17:12.33:100,12,0	0/0:12,0:19:31.84:0,32,201	0/0:5,0:12:20.02:0,20,103	0/0:3,0:5:3.44:0,3,21	1/1:7,6:13:8.34:107,8,0	1/1:10,8:17:17.36:144,17,0	0/1:5,8:14:13.03:108,0,13	1/1:8,6:15:6.02:67,6,0	1/1:9,7:16:19.43:161,19,0	0/1:5,8:13:19.87:122,0,20	1/1:4,5:9:14.96:121,15,0
chr10	18542508	.	AAG	A	185.06	PASS	AC=8;AF=0.182;AN=44;BaseQRankSum=-0.041;DP=246;FS=18.876;HRun=0;HaplotypeScore=60.9873;InbreedingCoeff=0.6434;MQ=67.48;MQ0=24;MQRankSum=1.488;QD=11.57;ReadPosRankSum=-3.754;VQSLOD=1.1708;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:7:9.02:0,9,106	0/0:2,0:2:6.02:0,6,102	0/0:48,0:20:15.54:0,16,463	0/0:69,0:20:21.69:0,22,349	0/0:15,0:13:28.43:0,28,476	./.	0/0:4,0:3:3.01:0,3,38	1/1:0,6:5:15.01:149,15,0	0/0:16,0:15:16.20:0,16,477	0/0:5,0:5:14.79:0,15,216	0/0:4,0:4:9.03:0,9,153	./.	0/0:8,0:8:12.51:0,13,176	0/0:3,0:3:6.02:0,6,102	./.	0/0:4,0:1:3.01:0,3,40	0/0:2,0:2:6.02:0,6,101	./.	1/1:3,0:3:9.02:104,9,0	1/1:1,2:2:5.94:41,6,0	1/1:3,1:4:2.96:19,3,0	./.	0/0:6,0:6:15.05:0,15,254	0/0:5,0:5:9.03:0,9,153	./.	0/0:7,0:7:15.49:0,15,213	0/0:5,0:5:9.03:0,9,152	0/0:8,0:7:20.47:0,20,248
chr10	18542535	.	AG	A	1530.58	PASS	AC=26;AF=0.565;AN=46;BaseQRankSum=3.072;DP=252;FS=14.465;HRun=7;HaplotypeScore=70.7240;InbreedingCoeff=0.7954;MQ=82.84;MQ0=16;MQRankSum=-4.268;QD=20.14;ReadPosRankSum=2.524;VQSLOD=2.3202;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,3:4:6.01:61,6,0	1/1:0,2:2:6.01:61,6,0	0/0:45,0:30:26.63:0,27,502	0/0:60,1:26:23.52:0,24,428	1/1:2,9:11:24.05:244,24,0	./.	0/0:7,0:6:15.05:0,15,189	0/0:12,0:11:21.07:0,21,264	0/0:15,0:15:33.06:0,33,397	1/1:0,6:6:18.04:184,18,0	1/1:1,3:4:9.02:91,9,0	./.	1/1:6,3:9:9.01:92,9,0	1/1:2,3:5:9.02:91,9,0	./.	0/0:5,0:2:3.01:0,3,38	1/1:0,2:2:6.01:61,6,0	./.	0/0:11,0:11:30.09:0,30,372	0/0:2,0:2:3.01:0,3,38	0/0:4,0:4:9.03:0,9,113	0/0:2,0:1:3.01:0,3,38	1/1:0,8:8:21.05:214,21,0	1/1:1,4:5:12.03:122,12,0	./.	1/1:0,7:7:21.05:214,21,0	1/1:1,7:8:18.04:183,18,0	1/1:2,3:5:9.01:92,9,0
chr10	18544583	.	G	GC	615.49	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-4.435;DP=613;FS=0.907;HRun=5;HaplotypeScore=59.5658;InbreedingCoeff=0.9824;MQ=91.10;MQ0=0;MQRankSum=-2.606;QD=26.76;ReadPosRankSum=2.639;VQSLOD=3.4704;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,19:23:54.18:710,54,0	0/0:9,0:9:24.06:0,24,258	0/0:26,0:26:71.47:0,71,743	0/0:24,0:24:57.07:0,57,576	0/0:31,0:31:84.21:0,84,903	0/0:33,0:33:93.22:0,93,992	0/0:20,0:20:51.13:0,51,548	0/0:24,0:24:69.17:0,69,742	0/0:23,0:23:69.16:0,69,734	0/0:30,0:30:87.19:0,87,924	0/0:21,0:21:57.12:0,57,605	0/0:22,0:22:54.11:0,54,571	0/0:18,0:18:51.08:0,51,529	0/0:22,0:22:60.15:0,60,645	0/0:26,0:26:69.14:0,69,726	0/0:22,0:22:63.14:0,63,669	0/0:21,0:21:60.15:0,60,644	0/0:20,0:20:55.38:0,55,583	0/0:21,0:21:51.13:0,51,547	0/0:16,0:16:45.08:0,45,466	0/0:21,0:21:60.15:0,60,645	0/0:19,0:19:57.14:0,57,613	0/0:19,0:19:45.11:0,45,484	0/0:25,0:25:69.15:0,69,733	0/0:25,0:25:66.16:0,66,709	0/0:30,0:30:81.17:0,81,849	0/0:16,0:16:48.12:0,48,516	0/0:6,0:6:15.04:0,15,161
chr10	18545961	.	TC	T	3851.47	PASS	AB=1.000;AC=48;AF=0.857;AN=56;BaseQRankSum=-3.986;DP=356;FS=4.337;HRun=3;HaplotypeScore=68.5169;InbreedingCoeff=0.6138;MQ=54.12;MQ0=7;MQRankSum=1.630;QD=14.16;ReadPosRankSum=-1.623;VQSLOD=2.2457;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,2:13:24.20:171,24,0	1/1:5,0:5:12.01:113,12,0	0/0:39,0:17:17.08:0,17,353	0/0:25,1:8:5.76:0,6,54	1/1:15,0:15:20.93:169,21,0	1/1:13,0:13:26.16:197,26,0	1/1:14,0:13:27.46:219,27,0	1/1:11,0:11:18.84:155,19,0	0/0:17,0:17:46.15:0,46,470	1/1:15,0:12:25.64:194,26,0	1/1:16,0:16:28.02:220,28,0	0/1:5,0:5:15.57:44,0,16	1/1:7,0:6:8.98:74,9,0	1/1:13,0:12:20.93:158,21,0	1/1:9,0:8:11.94:60,12,0	1/1:10,1:10:26.38:226,26,0	0/1:11,0:10:1.64:41,0,2	1/1:4,0:4:2.98:21,3,0	1/1:11,0:10:22.26:149,22,0	1/1:11,0:11:28.91:219,29,0	1/1:5,0:5:11.93:93,12,0	1/1:8,0:8:21:187,21,0	1/1:13,0:12:13.80:156,14,0	1/1:10,0:10:14.21:134,14,0	1/1:11,1:9:19.24:142,19,0	1/1:17,0:15:44.92:389,45,0	1/1:18,0:17:34.12:279,34,0	1/1:5,0:5:7.30:42,7,0
chr10	18545977	.	AG	A	3884.41	PASS	AB=0.965;AC=53;AF=0.946;AN=56;BaseQRankSum=4.751;DP=452;FS=13.649;HRun=1;HaplotypeScore=111.3357;InbreedingCoeff=0.2760;MQ=39.34;MQ0=9;MQRankSum=-2.398;QD=8.59;ReadPosRankSum=-2.242;VQSLOD=-0.4619;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:17,4:21:52.55:374,53,0	1/1:6,1:7:17.86:133,18,0	0/1:35,2:14:10.20:10,0,108	0/1:35,0:5:1.25:1,0,5	1/1:24,1:25:35.19:245,35,0	1/1:16,0:16:37.50:265,38,0	1/1:15,0:13:26.25:178,26,0	1/1:21,0:17:29.69:164,30,0	0/1:17,1:18:4.69:5,0,364	1/1:20,1:18:41.04:255,41,0	1/1:18,0:18:24.48:132,24,0	1/1:15,0:14:21.06:138,21,0	1/1:9,0:8:16.70:119,17,0	1/1:16,2:17:22.54:133,23,0	1/1:20,2:21:42.34:270,42,0	1/1:6,1:6:15.50:103,15,0	1/1:14,1:14:20.51:100,21,0	1/1:5,2:7:8.35:45,8,0	1/1:16,0:13:25.45:139,25,0	1/1:15,0:15:19:105,19,0	1/1:2,0:2:4.20:22,4,0	1/1:8,0:8:11.60:78,12,0	1/1:14,1:14:20.60:156,21,0	1/1:9,1:10:11.06:73,11,0	1/1:18,3:18:38.59:232,39,0	1/1:19,0:17:32.97:224,33,0	1/1:10,0:8:13.83:73,14,0	1/1:9,0:9:18.96:113,19,0
chr10	18545982	.	AG	A	3639.20	PASS	AB=0.976;AC=51;AF=0.911;AN=56;BaseQRankSum=3.538;DP=464;FS=5.136;HRun=1;HaplotypeScore=117.8115;InbreedingCoeff=0.6156;MQ=37.30;MQ0=8;MQRankSum=-1.783;QD=8.94;ReadPosRankSum=-1.559;VQSLOD=0.5745;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,2:21:43.73:341,44,0	1/1:7,0:7:17.87:134,18,0	0/0:38,0:15:3.79:0,4,117	0/1:39,1:9:6.65:7,0,41	1/1:27,0:27:37.42:287,37,0	1/1:18,0:18:37.67:279,38,0	1/1:15,0:13:21.07:140,21,0	1/1:23,0:19:27.09:155,27,0	0/0:19,0:19:42.03:0,42,607	1/1:21,1:19:34.20:233,34,0	1/1:16,0:16:14.17:80,14,0	1/1:15,0:14:18.07:127,18,0	1/1:9,0:8:15.75:113,16,0	1/1:16,0:16:16.82:104,17,0	1/1:22,1:22:42.88:285,43,0	1/1:8,0:7:17.96:120,18,0	1/1:14,1:14:15.86:85,16,0	1/1:8,1:9:13.59:87,14,0	1/1:14,0:11:16.75:96,17,0	1/1:14,0:14:10.45:67,10,0	1/1:2,0:2:3.43:20,3,0	1/1:7,0:7:7.36:47,7,0	1/1:15,1:15:21.09:152,21,0	1/1:9,1:10:12.66:84,13,0	1/1:17,1:15:27.64:167,28,0	1/1:19,0:17:27.61:197,28,0	1/1:13,0:11:19.33:132,19,0	1/1:10,0:10:16.43:100,16,0
chr10	18545998	.	GAA	G	6354.83	PASS	AB=0.609;AC=47;AF=0.839;AN=56;BaseQRankSum=-1.204;DP=436;FS=4.465;HRun=12;HaplotypeScore=108.4525;InbreedingCoeff=0.5144;MQ=42.03;MQ0=7;MQRankSum=-1.992;QD=18.05;ReadPosRankSum=1.492;VQSLOD=4.1486;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,0:17:26.29:131,26,0	1/1:1,6:7:15.03:151,15,0	0/0:29,0:11:6.53:0,7,90	0/0:38,0:11:7.69:0,8,205	1/1:3,16:21:22.97:444,23,0	1/1:7,14:21:41.54:423,42,0	1/1:2,14:15:30.04:305,30,0	1/1:5,14:16:39.35:366,39,0	0/0:15,0:15:36.12:0,36,514	1/1:2,17:20:45.04:454,45,0	1/1:6,9:17:30.04:296,30,0	0/1:7,7:13:10.72:187,0,11	1/1:3,8:10:18.03:182,18,0	1/1:3,9:12:27.05:274,27,0	1/1:10,13:22:19.36:371,19,0	1/1:1,9:10:27.05:271,27,0	1/1:6,8:15:10.24:289,10,0	1/1:1,5:6:8.98:91,9,0	1/1:5,11:13:20.26:298,20,0	1/1:3,11:14:33.07:334,33,0	1/1:3,1:4:2.06:27,2,0	1/1:0,6:7:15.03:152,15,0	0/1:3,12:15:1.65:271,0,2	1/1:1,6:7:8.31:90,8,0	1/1:7,13:19:27.03:274,27,0	1/1:5,9:15:26.86:274,27,0	0/1:5,9:13:30.17:184,0,30	1/1:1,7:8:21.04:213,21,0
chr10	18546278	.	T	TA	26285.22	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-6.534;DP=734;FS=0.398;HRun=0;HaplotypeScore=128.4844;InbreedingCoeff=0.9974;MQ=73.36;MQ0=0;MQRankSum=-6.399;QD=42.46;ReadPosRankSum=1.131;VQSLOD=4.2158;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:84.28:0,84,1174	1/1:2,7:9:27.09:428,27,0	0/0:20,0:20:60.19:0,60,811	0/0:21,0:21:46.32:0,46,614	1/1:2,14:16:38.94:621,39,0	1/1:1,29:30:84.29:1341,84,0	1/1:0,30:30:87.30:1391,87,0	1/1:0,26:26:78.20:1169,78,0	0/0:34,0:34:99:0,99,1385	1/1:3,28:30:87.29:1370,87,0	1/1:2,12:14:36.11:550,36,0	1/1:4,32:36:90.31:1432,90,0	1/1:3,32:35:99:1556,99,0	1/1:3,36:39:93.32:1479,93,0	1/1:4,28:32:84.29:1341,84,0	1/1:4,27:31:81.28:1284,81,0	1/1:0,26:26:75.26:1198,75,0	1/1:0,16:16:45.15:719,45,0	1/1:2,28:30:87.25:1358,87,0	1/1:1,23:24:69.24:1100,69,0	1/1:0,29:29:78.27:1241,78,0	1/1:1,18:19:45.15:713,45,0	1/1:3,16:18:48.15:743,48,0	1/1:3,25:28:78.22:1217,78,0	1/1:2,24:24:63.20:984,63,0	1/1:4,23:27:75.25:1182,75,0	1/1:4,36:39:99:1581,99,0	1/1:0,6:6:18.06:287,18,0
chr10	18546320	.	A	AAAACAAAC	44840.85	PASS	AB=0.917;AC=49;AF=0.875;AN=56;BaseQRankSum=8.116;DP=837;FS=20.437;HRun=0;HaplotypeScore=326.6293;InbreedingCoeff=0.8153;MQ=52.71;MQ0=1;MQRankSum=-9.404;QD=60.03;ReadPosRankSum=-0.598;VQSLOD=3.6075;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:40,0:40:63.09:2260,63,0	1/1:2,2:4:9.03:332,9,0	0/0:36,0:33:41.96:0,42,863	0/0:24,0:23:36.12:0,36,894	1/1:15,10:25:39.13:1444,39,0	1/1:17,16:34:69.24:2619,69,0	1/1:22,4:27:33.10:972,33,0	1/1:43,1:44:45.15:1209,45,0	0/0:30,0:30:63.20:0,63,1535	1/1:23,11:33:51.14:1827,51,0	1/1:12,3:15:27.09:783,27,0	1/1:20,21:41:78.27:3052,78,0	1/1:20,18:38:87.28:3074,87,0	1/1:20,19:40:78.25:2976,78,0	1/1:26,20:46:93.30:3229,93,0	1/1:24,22:47:96.33:3692,96,0	1/1:14,2:16:18.06:627,18,0	1/1:13,3:16:18.06:750,18,0	1/1:26,6:32:63.17:1965,63,0	1/1:14,13:27:51.15:1844,51,0	1/1:19,4:23:27.08:779,27,0	1/1:19,16:35:75.25:2667,75,0	1/1:16,8:23:45.13:1406,45,0	1/1:21,6:27:27.05:829,27,0	1/1:12,10:20:24.08:999,24,0	1/1:24,9:33:45.15:1633,45,0	1/1:23,22:45:96.30:3589,96,0	0/1:9,1:11:37.85:284,0,38
chr10	18546332	.	C	CAAACAAAT	29741.81	PASS	AB=1.000;AC=26;AF=0.464;AN=56;BaseQRankSum=2.985;DP=857;FS=8.278;HRun=0;HaplotypeScore=356.9211;InbreedingCoeff=-0.7231;MQ=51.13;MQ0=1;MQRankSum=-7.826;QD=38.93;ReadPosRankSum=15.371;VQSLOD=2.1127;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:6,35:49:69.14:2669,69,0	0/1:6,0:6:65.93:196,0,66	0/0:36,0:33:40.95:0,41,1170	0/0:29,0:28:56.05:0,56,1209	0/1:25,0:25:99:844,0,127	0/1:37,0:37:99:1725,0,259	0/1:25,0:25:99:754,0,158	0/1:42,0:42:67.47:67,0,512	0/0:28,0:28:75.17:0,75,1775	0/1:34,0:33:99:974,0,293	0/1:15,0:15:99:322,0,123	0/1:40,0:40:99:2242,0,123	0/1:43,0:43:99:1929,0,256	0/1:41,0:41:99:2206,0,173	0/1:45,0:45:99:2181,0,179	0/1:44,0:44:99:2533,0,197	0/1:15,0:15:73.18:437,0,73	0/1:14,0:14:99:294,0,114	0/1:36,0:35:99:771,0,376	0/1:31,0:31:99:1360,0,180	0/1:21,0:21:99:608,0,138	0/1:37,0:37:99:1732,0,197	0/1:26,0:25:99:912,0,156	0/1:26,0:26:61.42:625,0,61	0/1:23,0:21:99:816,0,108	0/1:35,0:35:99:897,0,368	0/1:43,0:43:99:2355,0,142	0/1:11,0:11:99:293,0,122
chr10	18546357	.	A	ACTT	35756.99	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=2.964;DP=799;FS=3.904;HRun=0;HaplotypeScore=266.1542;InbreedingCoeff=0.9995;MQ=63.00;MQ0=0;MQRankSum=-10.231;QD=52.12;ReadPosRankSum=3.323;VQSLOD=4.7058;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:48.16:0,48,816	1/1:0,10:10:27.09:621,27,0	0/0:27,0:26:72.19:0,72,1108	0/0:21,0:21:47.34:0,47,836	1/1:6,26:34:72.10:1491,72,0	1/1:3,34:38:84.25:1884,84,0	1/1:9,17:26:69.04:1359,69,0	1/1:16,17:33:96.13:1758,96,0	0/0:24,0:24:72.22:0,72,1174	1/1:5,26:33:90.24:1834,90,0	1/1:2,17:20:45.11:984,45,0	1/1:9,24:33:87.14:1685,87,0	1/1:4,39:45:99:2574,123,0	1/1:5,27:32:75.22:1671,75,0	1/1:2,34:36:99:2129,99,0	1/1:10,30:41:99:2169,108,0	1/1:4,12:16:36.09:738,36,0	1/1:6,9:15:39.06:718,39,0	1/1:11,19:29:81.26:1718,81,0	1/1:1,32:34:93.20:1979,93,0	1/1:7,14:21:36.06:716,36,0	1/1:5,28:35:87.08:1754,87,0	1/1:3,20:25:47.88:1054,48,0	1/1:2,19:22:45.04:934,45,0	1/1:3,19:21:54.14:1193,54,0	1/1:1,28:31:93.28:2016,93,0	1/1:11,29:40:99:2019,105,0	1/1:1,12:13:33.11:759,33,0
chr10	18549402	.	G	GA	6131.42	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-6.327;DP=710;FS=0.654;HRun=8;HaplotypeScore=93.7036;InbreedingCoeff=0.9958;MQ=83.65;MQ0=0;MQRankSum=-0.640;QD=28.52;ReadPosRankSum=1.338;VQSLOD=4.7132;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,1:45:99:0,101,1152	0/0:11,0:11:33.02:0,33,302	0/0:25,0:25:50.89:0,51,445	0/0:18,0:19:13.28:0,13,231	0/0:11,0:11:33.02:0,33,302	1/1:0,25:25:72.21:831,72,0	1/1:1,28:29:69.21:796,69,0	0/0:37,0:37:90.05:0,90,824	0/0:26,0:25:63.10:0,63,599	0/0:31,0:31:84.03:0,84,766	0/0:18,0:18:51.03:0,51,467	1/1:3,24:28:72.05:810,72,0	0/0:23,0:23:60.01:0,60,543	0/0:21,0:21:60.03:0,60,549	1/1:5,23:28:66.20:762,66,0	1/1:1,27:28:44.75:769,45,0	0/0:36,0:36:99:0,102,933	1/1:0,13:13:30.09:345,30,0	0/0:16,0:16:48.03:0,48,439	0/0:32,0:32:87.05:0,87,796	0/0:22,0:22:51.01:0,51,467	1/1:4,29:33:81.20:920,81,0	0/0:29,0:29:74.12:0,74,685	0/0:23,0:25:64.10:0,64,561	1/1:3,28:31:78.23:898,78,0	0/0:25,0:25:68.94:0,69,615	0/0:32,0:32:86.06:0,86,769	0/0:10,0:10:30.02:0,30,274
chr10	18550732	.	GTCTCTC	G	2836.62	PASS	AB=0.900;AC=12;AF=0.231;AN=52;BaseQRankSum=-2.001;DP=604;FS=5.373;HRun=0;HaplotypeScore=159.4289;InbreedingCoeff=-0.0286;MQ=57.79;MQ0=14;MQRankSum=2.944;QD=13.26;ReadPosRankSum=2.424;VQSLOD=2.8608;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:5.95:0,6,44	0/0:6,0:6:4.33:0,4,26	0/0:41,0:17:39.52:0,40,763	0/0:26,0:14:24.68:0,25,864	1/1:12,2:14:1.60:236,2,0	0/0:6,0:24:5.50:0,5,103	0/0:6,0:15:2.54:0,3,25	0/0:29,0:28:69.19:0,69,1604	0/0:15,0:15:42.13:0,42,1097	1/1:17,5:21:12.92:818,13,0	0/1:25,1:26:21.42:238,0,21	0/0:5,0:17:12.04:0,12,298	0/1:18,2:20:88.42:269,0,88	0/1:10,1:12:46.64:80,0,47	0/0:2,0:21:12.03:0,12,264	0/0:4,0:22:9.03:0,9,214	0/1:38,0:39:21.99:368,0,22	0/0:6,0:15:21.07:0,21,453	0/0:12,0:26:75.25:0,75,1681	0/0:6,0:14:6:0,6,149	./.	./.	0/1:19,3:22:53.20:223,0,53	0/0:17,1:18:10.33:0,10,68	0/0:6,0:29:6.02:0,6,155	0/1:21,4:25:54.90:621,0,55	0/1:17,2:19:76.02:114,0,76	0/1:12,1:14:14.30:14,0,37
chr10	18550750	.	G	GTA	4965.88	PASS	AB=0.708;AC=21;AF=0.375;AN=56;BaseQRankSum=2.626;DP=622;FS=13.598;HRun=0;HaplotypeScore=146.1676;InbreedingCoeff=0.5079;MQ=50.36;MQ0=20;MQRankSum=1.514;QD=16.66;ReadPosRankSum=5.962;VQSLOD=3.9051;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:15,11:26:2.95:0,3,24	1/1:0,5:5:12.04:229,12,0	0/0:33,0:10:23.16:0,23,211	0/0:25,0:11:18.70:0,19,201	1/1:13,2:23:21:235,21,0	0/0:25,0:23:12.44:0,12,97	0/0:17,0:17:14.83:0,15,138	0/0:25,0:24:68.12:0,68,473	0/0:18,0:18:51.03:0,51,605	1/1:7,16:25:58.90:575,59,0	1/1:4,23:29:6.99:384,7,0	0/0:16,0:15:16.27:0,16,87	0/1:6,13:21:11.38:275,0,11	0/1:4,12:17:15.69:241,0,16	0/0:20,0:20:13.10:0,13,73	0/0:23,0:23:22.83:0,23,169	0/1:9,28:39:18.58:692,0,19	0/0:15,0:14:20.31:0,20,135	0/0:19,0:16:40.87:0,41,303	0/1:23,0:21:0:0,0,0	0/1:11,0:9:0:0,0,0	0/0:33,0:31:8.97:0,9,71	1/1:6,12:19:27.09:503,27,0	1/1:5,19:25:24.08:455,24,0	0/0:28,0:27:14.48:0,14,113	1/1:7,16:25:9.02:701,9,0	0/1:6,15:21:12.40:416,0,12	0/1:5,5:10:20.36:261,0,20
chr10	18551050	.	TC	T	2129.16	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-0.495;DP=762;FS=2.419;HRun=2;HaplotypeScore=112.2288;InbreedingCoeff=0.9990;MQ=83.81;MQ0=0;MQRankSum=-3.001;QD=34.90;ReadPosRankSum=0.612;VQSLOD=3.4031;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,61:61:99:2224,160,0	0/0:10,0:10:30.10:0,30,480	0/0:31,0:30:72.85:0,73,1178	0/0:25,0:26:76.98:0,77,1135	0/0:28,0:28:84.27:0,84,1315	0/0:24,0:24:69.23:0,69,1085	0/0:25,0:25:72.22:0,72,1099	0/0:35,0:35:99:0,102,1609	0/0:41,0:41:99:0,123,1905	0/0:20,0:20:60.20:0,60,928	0/0:23,0:23:69.24:0,69,1102	0/0:27,0:27:81.28:0,81,1276	0/0:28,0:28:84.18:0,84,1308	0/0:22,0:22:66.22:0,66,1051	0/0:33,0:33:99:0,99,1583	0/0:34,0:34:99:0,102,1610	0/0:23,0:23:69.23:0,69,1094	0/0:27,0:27:81.28:0,81,1295	0/0:19,0:19:57.19:0,57,901	0/0:19,0:19:54.18:0,54,863	0/0:26,0:26:72.21:0,72,1124	0/0:37,0:37:96.29:0,96,1483	0/0:16,0:16:45.15:0,45,709	0/0:30,0:30:90.30:0,90,1415	0/0:28,0:28:81.28:0,81,1281	0/0:25,0:25:75.25:0,75,1177	0/0:34,0:33:99:0,102,1631	0/0:10,0:10:30.10:0,30,479
chr10	18551721	.	TG	T	4063.73	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=4.703;DP=648;FS=9.891;HRun=1;HaplotypeScore=80.8900;InbreedingCoeff=0.9871;MQ=85.66;MQ0=0;MQRankSum=-0.008;QD=39.45;ReadPosRankSum=0.959;VQSLOD=3.7415;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,102,1613	0/0:5,0:5:15.05:0,15,240	0/0:23,0:23:68.96:0,69,1030	0/0:18,0:18:38.87:0,39,627	0/0:24,0:24:69.22:0,69,1071	0/0:24,0:24:72.23:0,72,1110	0/0:23,0:23:69.24:0,69,1102	1/1:1,19:20:59.66:770,60,0	0/0:23,0:23:69.24:0,69,1102	0/0:25,0:25:75.26:0,75,1199	0/0:15,0:15:45.15:0,45,719	0/0:22,0:22:66.21:0,66,1027	0/0:29,0:29:87.30:0,87,1388	0/0:28,0:28:84.29:0,84,1336	0/0:27,0:27:81.28:0,81,1284	0/0:16,0:16:48.16:0,48,761	0/0:38,0:37:99:0,114,1816	0/0:29,0:29:87.27:0,87,1347	1/1:0,22:22:66.22:923,66,0	1/1:0,22:22:60.16:817,60,0	1/1:0,39:39:99:1553,111,0	0/0:24,0:24:72.25:0,72,1148	0/0:19,0:19:57.17:0,57,872	0/0:25,0:25:75.26:0,75,1199	0/0:19,0:19:57.19:0,57,908	0/0:33,0:33:99:0,99,1538	0/0:18,0:18:54.18:0,54,859	0/0:4,0:4:12.04:0,12,191
chr10	18552594	.	TTTAATAG	T	16725.89	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=19.661;DP=635;FS=3.098;HRun=0;HaplotypeScore=171.3369;InbreedingCoeff=0.9994;MQ=58.19;MQ0=1;MQRankSum=-19.095;QD=63.12;ReadPosRankSum=1.838;VQSLOD=4.8016;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,15:17:36.12:942,36,0	0/0:19,0:19:57.20:0,57,2230	0/0:15,0:12:36.12:0,36,1340	0/0:25,0:20:60.10:0,60,2120	0/0:37,0:37:99:0,111,4411	1/1:0,19:19:48.16:1246,48,0	1/1:1,13:14:33.11:868,33,0	1/1:4,18:22:54.16:1289,54,0	0/0:22,0:22:66.21:0,66,2547	0/0:42,0:42:99:0,126,4844	0/0:31,0:31:90.31:0,90,3590	1/1:1,20:21:54.19:1399,54,0	0/0:26,0:26:78.27:0,78,3036	0/0:26,0:26:75.26:0,75,2981	1/1:0,23:23:57.20:1493,57,0	1/1:0,31:31:78.27:2043,78,0	0/0:22,0:22:63.22:0,63,2458	1/1:3,12:15:33.11:870,33,0	1/1:8,12:20:36.12:913,36,0	1/1:1,28:29:87.26:2233,87,0	1/1:2,10:12:27.09:683,27,0	1/1:2,19:21:54.14:1332,54,0	0/0:27,0:27:81.28:0,81,3190	0/0:13,0:13:39.13:0,39,1551	1/1:1,20:21:54.19:1415,54,0	0/0:34,0:34:99:0,102,3899	0/0:23,0:23:69.24:0,69,2704	0/0:8,0:8:24.08:0,24,957
chr10	18554130	.	C	CT	12334.04	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=8.853;DP=583;FS=1.760;HRun=0;HaplotypeScore=83.6015;InbreedingCoeff=0.9908;MQ=79.12;MQ0=0;MQRankSum=-2.112;QD=42.24;ReadPosRankSum=-2.426;VQSLOD=4.3734;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,35:35:96.33:1534,96,0	0/0:8,0:8:24.08:0,24,336	0/0:19,0:19:47.51:0,48,603	0/0:8,0:8:18.06:0,18,252	0/0:21,0:21:59.63:0,60,837	1/1:1,28:29:81.28:1295,81,0	1/1:0,17:16:42.14:672,42,0	1/1:1,19:20:60.20:956,60,0	0/0:24,0:24:69.22:0,69,948	0/0:23,0:23:69.23:0,69,965	0/0:20,0:20:60.20:0,60,839	1/1:0,15:15:42.14:671,42,0	0/0:20,0:20:57.19:0,57,797	0/0:18,1:19:9.22:0,9,707	1/1:2,27:29:72.25:1151,72,0	1/1:2,12:14:29.89:451,30,0	0/0:21,0:21:60.19:0,60,822	1/1:0,12:12:36.12:576,36,0	1/1:2,25:27:75.26:1194,75,0	1/1:0,19:19:48.16:765,48,0	1/1:0,27:26:69.24:1104,69,0	1/1:0,25:25:60.20:958,60,0	0/0:20,0:20:60.20:0,60,837	0/0:30,0:30:90.30:0,90,1257	1/1:0,23:23:63.21:1007,63,0	0/0:18,0:18:54.18:0,54,754	0/0:30,0:30:90.28:0,90,1237	0/0:10,0:10:30.10:0,30,419
chr10	18554259	.	TAA	T	7921.28	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-2.685;DP=559;FS=4.987;HRun=9;HaplotypeScore=99.5997;InbreedingCoeff=0.9905;MQ=74.62;MQ0=0;MQRankSum=-1.160;QD=29.78;ReadPosRankSum=2.180;VQSLOD=4.9933;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,33:35:90.26:1049,90,0	0/0:8,0:8:18.52:0,19,272	0/0:17,0:14:33.09:0,33,482	0/0:15,0:14:30.10:0,30,442	0/0:21,0:21:57.18:0,57,908	1/1:1,16:17:42.12:489,42,0	1/1:1,15:16:36.11:419,36,0	1/1:3,26:29:75.20:861,75,0	0/0:19,0:19:57.19:0,57,935	0/0:24,0:24:72.24:0,72,1124	0/0:23,0:23:63.21:0,63,1013	1/1:0,12:12:33.10:385,33,0	0/0:13,0:13:39.13:0,39,638	0/0:11,0:11:27.09:0,27,441	1/1:1,13:14:36.10:420,36,0	1/1:2,16:18:39.11:455,39,0	0/0:30,0:29:81.27:0,81,1289	1/1:2,19:21:54.15:629,54,0	1/1:3,22:25:66.18:767,66,0	1/1:3,30:33:90.26:1049,90,0	1/1:2,10:12:26.60:314,27,0	1/1:1,12:13:36.10:420,36,0	0/0:30,0:30:81.24:0,81,1240	0/0:18,0:18:45.14:0,45,683	1/1:0,21:21:57.17:664,57,0	0/0:35,0:35:90.73:0,91,1420	0/0:26,0:26:69.24:0,69,1117	0/0:3,0:3:9.03:0,9,147
chr10	18554381	.	GA	G	5758.51	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-9.636;DP=529;FS=4.452;HRun=10;HaplotypeScore=85.5053;InbreedingCoeff=0.9800;MQ=63.59;MQ0=9;MQRankSum=-0.886;QD=18.82;ReadPosRankSum=1.012;VQSLOD=5.6127;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:9,50:59:99:1118,104,0	0/0:2,0:3:8.48:0,8,41	0/0:8,0:6:17.97:0,18,167	0/0:4,0:3:8.98:0,9,80	0/0:7,0:21:40.12:0,40,214	1/1:3,15:18:38.99:339,39,0	1/1:6,13:19:41.02:345,41,0	1/1:5,17:21:47.91:405,48,0	0/0:15,0:14:36.10:0,36,398	0/0:4,0:14:29.81:0,30,152	0/0:5,0:20:43.01:0,43,232	1/1:4,17:21:33.64:376,34,0	0/0:2,0:15:31.42:0,31,175	0/0:2,0:12:22.73:0,23,114	1/1:1,10:13:34.07:272,34,0	1/1:3,15:20:46.06:377,46,0	0/0:7,0:32:71.10:0,71,368	1/1:4,19:23:56.98:495,57,0	1/1:4,18:21:44.90:385,45,0	1/1:4,22:26:53.95:469,54,0	1/1:2,16:17:38.98:339,39,0	1/1:2,13:16:38.02:318,38,0	0/0:6,0:14:25.81:0,26,138	0/0:2,0:18:39.77:0,40,199	1/1:5,21:25:59.98:521,60,0	0/0:1,0:18:49.06:0,49,287	0/0:6,0:19:35.41:0,35,175	0/0:3,0:8:18.44:0,18,98
chr10	18554469	.	GTCTT	G	975.66	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.589;DP=569;FS=13.726;HRun=0;HaplotypeScore=142.8642;InbreedingCoeff=0.8629;MQ=77.13;MQ0=0;MQRankSum=-1.931;QD=34.85;ReadPosRankSum=1.271;VQSLOD=3.4038;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,18:28:60.18:1070,60,0	0/0:6,0:6:18.06:0,18,448	0/0:18,0:18:4.98:0,5,696	0/0:7,0:7:18.06:0,18,343	0/0:28,0:28:78.22:0,78,2020	0/0:27,0:27:69.22:0,69,1768	0/0:19,0:19:51.17:0,51,1262	0/0:23,0:23:63.21:0,63,1559	0/0:14,0:14:36.12:0,36,941	0/0:25,0:25:75.26:0,75,1934	0/0:20,0:20:57.19:0,57,1455	0/0:18,0:18:51.16:0,51,1235	0/0:21,0:21:60.21:0,60,1583	0/0:22,0:22:66.23:0,66,1743	0/0:20,0:20:54.17:0,54,1334	0/0:19,0:19:51.18:0,51,1342	0/0:31,0:30:78.19:0,78,1881	0/0:24,0:24:60.21:0,60,1553	0/0:27,0:27:66.16:0,66,1494	0/0:28,0:28:81.28:0,81,2085	0/0:15,0:15:36.12:0,36,945	0/0:16,0:16:45.15:0,45,1146	0/0:17,0:17:51.18:0,51,1341	0/0:18,0:18:45.15:0,45,1167	0/0:17,0:17:48.16:0,48,1211	0/0:21,0:21:63.21:0,63,1584	0/0:35,0:35:99:0,99,2594	0/0:5,0:5:15.05:0,15,396
chr10	18554933	.	AT	A	18217	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-0.387;DP=666;FS=5.880;HRun=5;HaplotypeScore=68.9482;InbreedingCoeff=0.9821;MQ=85.53;MQ0=0;MQRankSum=-7.465;QD=30.36;ReadPosRankSum=5.225;VQSLOD=5.2845;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,56:57:99:1666,147,0	1/1:0,13:13:36.10:408,36,0	0/0:16,0:16:45.13:0,45,571	0/0:29,1:30:57.02:0,57,755	1/1:3,27:30:81.23:917,81,0	1/1:0,22:22:63.18:715,63,0	1/1:3,19:22:45.13:510,45,0	1/1:1,28:29:84.24:953,84,0	0/0:20,0:20:60.18:0,60,802	1/1:2,21:23:63.15:702,63,0	1/1:0,18:18:51.15:578,51,0	1/1:0,15:15:45.13:511,45,0	1/1:0,25:25:69.20:783,69,0	1/1:3,20:23:57.16:646,57,0	1/1:0,23:23:66.19:749,66,0	1/1:2,18:20:10.09:503,10,0	1/1:0,42:42:99:1293,114,0	1/1:1,19:20:57.16:647,57,0	1/1:1,14:15:42.12:476,42,0	1/1:3,34:37:99:1123,99,0	1/1:1,15:16:39.11:442,39,0	1/1:0,25:25:66.19:749,66,0	1/1:2,24:26:69.06:783,69,0	1/1:2,27:29:75.21:851,75,0	1/1:2,20:22:57.16:647,57,0	1/1:1,16:17:48.14:544,48,0	1/1:0,24:24:69.20:782,69,0	1/1:0,7:7:21.06:238,21,0
chr10	18555059	.	TCCAC	T	23631.10	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=6.615;DP=558;FS=5.905;HRun=0;HaplotypeScore=140.5403;InbreedingCoeff=0.9785;MQ=72.50;MQ0=0;MQRankSum=-6.072;QD=46.24;ReadPosRankSum=5.070;VQSLOD=5.0057;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,38:40:90.22:1636,90,0	1/1:0,3:3:9.03:174,9,0	0/0:14,0:14:36.05:0,36,547	0/0:14,0:14:31.09:0,31,408	1/1:0,21:21:57.19:1091,57,0	1/1:2,22:24:60.21:1137,60,0	1/1:2,18:20:48.16:896,48,0	1/1:3,21:24:63.12:1042,63,0	0/0:19,0:19:57.18:0,57,1337	1/1:1,20:21:60.21:1153,60,0	1/1:0,25:25:69.15:1249,69,0	1/1:1,27:28:75.26:1445,75,0	1/1:0,26:26:57.15:1096,57,0	1/1:1,21:22:54.19:1034,54,0	1/1:2,26:28:75.26:1427,75,0	1/1:0,15:15:36.12:693,36,0	1/1:0,19:19:36.12:694,36,0	1/1:0,15:15:39.08:693,39,0	1/1:2,12:15:39.10:662,39,0	1/1:1,15:16:42.05:713,42,0	1/1:0,12:13:30.10:528,30,0	1/1:0,17:17:42.14:809,42,0	1/1:1,20:21:45.15:861,45,0	1/1:2,24:26:60.21:1156,60,0	1/1:0,15:15:36.12:649,36,0	1/1:1,31:32:93.31:1736,93,0	1/1:0,11:11:27.09:475,27,0	1/1:2,12:14:30.10:579,30,0
chr10	18555379	.	GT	G	6462.52	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=-1.051;DP=476;FS=10.378;HRun=8;HaplotypeScore=68.0476;InbreedingCoeff=0.9216;MQ=66.03;MQ0=3;MQRankSum=0.624;QD=22.06;ReadPosRankSum=1.277;VQSLOD=4.8065;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:65.28:0,65,747	1/1:2,4:6:9.01:87,9,0	0/0:16,0:7:15:0,15,155	0/0:12,0:7:1.52:0,2,32	1/1:4,22:26:63.09:607,63,0	0/0:14,0:14:41.64:0,42,295	0/0:6,0:6:17.80:0,18,120	1/1:9,28:37:83.27:769,83,0	0/0:12,0:12:30.09:0,30,361	1/1:5,20:25:57.07:544,57,0	1/1:3,15:18:39.05:375,39,0	0/0:13,0:13:38.58:0,39,260	1/1:1,20:21:54:521,54,0	1/1:1,9:10:27.04:261,27,0	0/0:14,0:14:38.55:0,39,259	0/0:12,0:12:32.60:0,33,218	1/1:2,28:30:60.09:579,60,0	0/0:26,0:26:71.29:0,71,500	1/1:5,11:15:2.85:259,3,0	1/1:3,17:20:48.07:463,48,0	1/1:0,3:3:9.01:87,9,0	0/0:7,0:7:14.87:0,15,107	1/1:0,12:12:36.06:348,36,0	1/1:1,7:8:18.03:174,18,0	0/0:26,0:26:68.19:0,68,462	1/1:3,20:23:60.09:578,60,0	1/1:1,20:21:51.08:493,51,0	1/1:4,13:17:33.05:319,33,0
chr10	18555718	.	C	CA	400.23	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.232;DP=583;FS=9.865;HRun=0;HaplotypeScore=107.8653;InbreedingCoeff=0.9272;MQ=65.20;MQ0=0;MQRankSum=-1.007;QD=16.01;ReadPosRankSum=-0.623;VQSLOD=5.0906;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,145,2014	0/0:3,0:3:9.03:0,9,126	0/0:19,0:18:48.15:0,48,649	0/0:16,0:16:45.15:0,45,615	1/1:2,23:25:38.20:495,38,0	0/0:14,0:14:42.12:0,42,554	0/0:28,0:28:43.11:0,43,1001	0/0:16,0:16:45.14:0,45,614	0/0:20,0:20:57.18:0,57,780	0/0:22,0:22:66.19:0,66,862	0/0:13,0:13:36.11:0,36,488	0/0:21,0:21:60.20:0,60,838	0/0:13,0:13:39.13:0,39,544	0/0:27,0:27:81.27:0,81,1130	0/0:25,0:25:75.24:0,75,1033	0/0:23,0:23:69.22:0,69,947	0/0:35,0:35:99:0,105,1465	0/0:25,0:25:72.24:0,72,1006	0/0:12,0:11:33.10:0,33,445	0/0:17,0:17:51.16:0,51,698	0/0:37,0:37:99:0,111,1550	0/0:8,0:8:21.07:0,21,293	0/0:21,0:21:60.19:0,60,821	0/0:31,0:31:93.22:0,93,1237	0/0:21,0:21:63.17:0,63,830	0/0:22,0:22:66.22:0,66,921	0/0:14,0:14:42.12:0,42,568	0/0:6,0:6:15.05:0,15,210
chr10	18556489	.	G	GTTT	6062.03	PASS	AB=1.000;AC=51;AF=0.911;AN=56;BaseQRankSum=-0.263;DP=527;FS=3.322;HRun=19;HaplotypeScore=138.3472;InbreedingCoeff=0.5469;MQ=60.88;MQ0=2;MQRankSum=-1.283;QD=12.30;ReadPosRankSum=-1.980;VQSLOD=0.7346;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:20:25.63:317,26,0	1/1:5,0:5:4.52:24,5,0	0/0:20,0:14:6.64:0,7,42	0/0:14,0:9:7.23:0,7,35	1/1:10,0:27:37.33:229,37,0	1/1:15,0:15:18.05:226,18,0	1/1:19,0:17:27.02:302,27,0	1/1:27,0:27:28.47:237,28,0	1/1:13,0:13:7.47:43,7,0	1/1:14,9:27:7.07:309,7,0	1/1:13,0:13:17.97:169,18,0	1/1:12,0:12:6.02:78,6,0	1/1:22,0:22:32.82:315,33,0	1/1:16,0:16:35.04:298,35,0	1/1:19,0:19:32.95:336,33,0	1/1:21,0:19:23.10:260,23,0	1/1:21,0:20:24.66:190,25,0	1/1:12,0:12:12.88:141,13,0	1/1:24,0:24:24.85:253,25,0	1/1:13,0:13:18.59:178,19,0	1/1:15,0:15:9.03:119,9,0	1/1:11,0:10:0.47:2,0,0	0/1:15,0:15:7.70:120,0,8	1/1:32,0:33:63.51:638,64,0	1/1:29,0:28:39.56:405,40,0	1/1:26,0:26:35.81:325,36,0	1/1:23,0:22:29.78:281,30,0	1/1:13,0:13:29.62:266,30,0
chr10	18556490	.	T	TTTTTTG	4987.86	PASS	AB=1.000;AC=24;AF=0.429;AN=56;BaseQRankSum=5.879;DP=532;FS=54.901;HRun=0;HaplotypeScore=168.9713;InbreedingCoeff=-0.2154;MQ=60.62;MQ0=2;MQRankSum=-2.222;QD=12.26;ReadPosRankSum=-1.593;VQSLOD=2.2934;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:20,0:19:99:366,0,144	0/0:5,0:5:6.47:0,6,37	0/0:20,0:14:17.19:0,17,185	0/0:14,0:9:7.57:0,8,113	0/0:27,0:27:10.40:0,10,171	0/1:15,0:15:99:229,0,107	0/1:19,0:17:99:365,0,109	1/1:33,0:33:56.02:819,56,0	0/0:13,0:13:23.47:0,23,174	0/1:29,0:29:45.85:46,0,234	0/0:13,0:13:1.62:0,2,74	0/1:12,0:12:85.26:85,0,130	0/1:22,0:22:35.75:36,0,141	0/1:17,0:16:14.42:39,0,14	0/1:18,0:18:86.55:479,0,87	0/1:20,0:18:99:243,0,115	0/0:22,0:21:15.79:0,16,156	0/1:11,0:11:66.57:146,0,67	1/1:7,17:26:65.17:720,65,0	1/1:15,0:15:38.75:521,39,0	1/1:14,0:14:11.82:206,12,0	0/0:11,0:10:17.87:0,18,131	0/1:15,0:15:8.21:8,0,137	0/1:32,0:32:98.91:99,0,129	0/1:29,0:28:99:447,0,166	0/1:26,0:26:32.51:33,0,181	0/1:21,0:20:34.89:35,0,139	0/1:13,0:13:61.47:67,0,61
chr10	18556494	.	T	TTG	498.90	PASS	AB=0.913;AC=4;AF=0.071;AN=56;BaseQRankSum=-2.015;DP=519;FS=5.543;HRun=0;HaplotypeScore=75.5320;InbreedingCoeff=-0.0817;MQ=57.79;MQ0=2;MQRankSum=2.917;QD=5.87;ReadPosRankSum=2.827;VQSLOD=2.2137;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:20:55.64:0,56,377	0/0:5,0:5:14.15:0,14,104	0/0:20,0:13:22.80:0,23,229	0/0:13,0:8:6.34:0,6,103	0/0:27,0:27:31.54:0,32,235	0/0:15,0:15:36.86:0,37,247	0/0:18,0:16:46.74:0,47,314	0/1:15,16:32:99:297,0,118	0/0:11,0:11:28.78:0,29,214	0/0:28,0:28:53.16:0,53,446	0/0:13,0:13:25.82:0,26,150	0/0:10,0:10:29.69:0,30,201	0/0:21,0:21:33.35:0,33,239	0/0:17,0:16:21.55:0,22,106	0/0:19,0:19:53.41:0,53,350	0/0:18,0:16:39.69:0,40,263	0/0:22,0:21:35.89:0,36,215	0/0:11,0:11:25.18:0,25,175	0/1:26,0:26:44.41:243,0,44	0/1:16,0:16:52.09:52,0,132	0/1:11,0:11:15.22:15,0,36	0/0:11,0:10:22.04:0,22,152	0/0:15,0:15:21.17:0,21,169	0/0:31,0:31:49.15:0,49,232	0/0:28,0:27:68.99:0,69,456	0/0:25,0:25:59.13:0,59,378	0/0:21,0:20:37.28:0,37,227	0/0:14,0:14:27.62:0,28,178
chr10	18557392	.	C	CT	2361.74	PASS	AB=0.796;AC=19;AF=0.339;AN=56;BaseQRankSum=-3.102;DP=545;FS=3.139;HRun=12;HaplotypeScore=86.3864;InbreedingCoeff=0.3674;MQ=61.79;MQ0=5;MQRankSum=0.724;QD=9.68;ReadPosRankSum=-1.348;VQSLOD=2.9360;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:11,18:29:56.12:561,56,0	0/0:8,0:8:17.88:0,18,131	0/0:10,0:8:5.92:0,6,44	0/0:6,0:5:8.93:0,9,64	0/0:23,1:24:13.66:0,14,198	1/1:8,15:23:38.90:365,39,0	1/1:4,9:12:23.99:224,24,0	0/0:30,1:31:11.52:0,12,239	0/0:16,0:18:36.83:0,37,251	0/0:15,2:18:2.61:0,3,168	0/0:15,0:18:32.89:0,33,214	1/1:10,8:19:0.91:205,1,0	0/1:12,1:15:3.35:3,0,129	0/0:21,0:22:43.65:0,44,307	0/1:5,15:21:37.52:287,0,38	1/1:2,8:11:8.15:102,8,0	0/0:45,0:46:99:0,111,797	0/1:18,14:32:56.48:325,0,56	0/1:10,2:13:29.01:29,0,130	0/1:9,2:14:53.27:53,0,93	0/0:11,0:12:22.86:0,23,157	0/1:9,9:19:11.50:240,0,11	0/0:15,0:18:24.61:0,25,160	0/0:33,1:34:51.25:0,51,537	1/1:9,6:15:17.09:141,17,0	0/0:17,0:14:19.22:0,19,136	0/1:15,1:15:8.28:8,0,201	0/0:15,0:15:29.78:0,30,219
chr10	18557475	.	A	AC	810.83	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-5.690;DP=558;FS=0.000;HRun=7;HaplotypeScore=63.0756;InbreedingCoeff=0.8958;MQ=66.32;MQ0=12;MQRankSum=0.002;QD=22.52;ReadPosRankSum=1.457;VQSLOD=3.6639;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,31:35:75.23:906,75,0	0/0:14,0:12:30.04:0,30,290	0/0:13,0:12:20.16:0,20,216	0/0:9,0:5:5.99:0,6,54	0/0:29,0:28:81.10:0,81,772	0/0:19,0:17:42.07:0,42,406	0/0:16,0:11:30.04:0,30,290	0/0:28,0:28:65.99:0,66,618	0/0:22,0:22:66.11:0,66,637	0/0:19,0:18:53.84:0,54,494	0/0:14,0:14:42.07:0,42,406	0/0:18,0:17:45.05:0,45,427	0/0:16,0:16:48.06:0,48,458	0/0:13,0:13:36.05:0,36,348	0/0:18,0:18:43.07:0,43,456	0/0:15,0:15:39.06:0,39,377	0/0:40,0:40:99:0,102,977	0/0:27,0:26:72.12:0,72,694	0/0:23,0:22:63.09:0,63,602	0/0:14,0:14:42.03:0,42,396	0/0:23,0:23:69.11:0,69,665	0/0:12,0:12:30.05:0,30,289	0/0:24,0:24:51.07:0,51,492	0/0:28,0:28:78.12:0,78,753	0/0:17,0:17:39.06:0,39,376	0/0:22,0:20:57.04:0,57,541	0/0:18,0:18:51.07:0,51,487	0/0:11,0:11:21.03:0,21,203
chr10	18558266	.	TG	T	760.31	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.795;DP=554;FS=1.727;HRun=3;HaplotypeScore=52.0239;InbreedingCoeff=0.9885;MQ=79.38;MQ0=0;MQRankSum=-1.771;QD=29.24;ReadPosRankSum=0.427;VQSLOD=2.8216;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,26:26:69.22:855,69,0	0/0:10,0:10:30.10:0,30,423	0/0:16,0:16:38.93:0,39,474	0/0:10,0:10:29.30:0,29,369	0/0:25,0:25:75.24:0,75,1060	0/0:25,0:25:72.24:0,72,1035	0/0:9,0:9:27.08:0,27,371	0/0:37,0:37:99:0,108,1540	0/0:19,0:19:57.19:0,57,819	0/0:20,0:20:60.20:0,60,862	0/0:13,0:13:36.12:0,36,518	0/0:11,0:11:33.11:0,33,474	0/0:19,0:19:57.17:0,57,801	0/0:19,0:19:57.19:0,57,820	0/0:23,0:23:69.22:0,69,975	0/0:21,0:21:63.21:0,63,907	0/0:13,0:13:39.13:0,39,562	0/0:23,0:23:66.22:0,66,950	0/0:21,0:21:57.18:0,57,802	0/0:28,0:28:81.26:0,81,1141	0/0:30,0:30:84.28:0,84,1209	0/0:9,0:9:27.09:0,27,389	0/0:19,0:19:57.19:0,57,819	0/0:21,0:21:63.21:0,63,907	0/0:27,0:27:81.25:0,81,1132	0/0:26,0:26:72.23:0,72,1004	0/0:28,0:28:81.27:0,81,1164	0/0:6,0:6:18.06:0,18,259
chr10	18558353	.	TA	T	3009.77	PASS	AC=16;AF=0.296;AN=54;BaseQRankSum=11.115;DP=480;FS=20.379;HRun=8;HaplotypeScore=44.1731;InbreedingCoeff=0.9790;MQ=64.60;MQ0=0;MQRankSum=1.136;QD=22.63;ReadPosRankSum=2.594;VQSLOD=2.0936;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:51.16:0,51,616	0/0:7,0:7:21.06:0,21,254	0/0:4,0:4:5.98:0,6,56	./.	0/0:24,0:24:69.19:0,69,813	1/1:3,30:33:87.14:840,87,0	1/1:2,10:12:24.04:232,24,0	0/0:41,0:41:99:0,114,1297	0/0:13,0:13:39.12:0,39,469	0/0:20,0:20:48.60:0,49,554	0/0:19,0:19:54.13:0,54,623	1/1:0,10:10:27.04:261,27,0	0/0:16,0:16:42.13:0,42,507	0/0:19,0:19:51.16:0,51,616	1/1:2,10:12:30.05:290,30,0	1/1:0,18:18:45.07:434,45,0	0/0:20,0:20:60.17:0,60,712	1/1:4,21:25:57.09:550,57,0	0/0:20,0:20:51.14:0,51,590	0/0:25,0:25:63.17:0,63,738	0/0:6,0:6:18.06:0,18,217	1/1:0,10:10:30.05:290,30,0	0/0:21,0:22:44.99:0,45,505	0/0:10,0:10:24.07:0,24,290	1/1:0,13:13:33.05:319,33,0	0/0:19,0:19:54.16:0,54,649	0/0:27,0:27:78.24:0,78,942	0/0:12,0:12:33.10:0,33,399
chr10	18558511	.	C	CT	6221.88	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-2.230;DP=487;FS=2.158;HRun=8;HaplotypeScore=52.5594;InbreedingCoeff=0.9733;MQ=70.51;MQ0=0;MQRankSum=-0.903;QD=27.17;ReadPosRankSum=1.782;VQSLOD=5.5204;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:60.03:0,60,549	1/1:3,8:11:18.05:208,18,0	0/0:10,0:9:26.90:0,27,223	0/0:7,0:6:5.54:0,6,42	1/1:2,29:31:87.21:977,87,0	0/0:18,0:18:45.02:0,45,412	0/0:9,0:9:24.01:0,24,220	0/0:37,0:37:90.04:0,90,823	0/0:12,0:12:32.99:0,33,295	1/1:3,19:22:54.16:619,54,0	1/1:1,16:17:48.14:554,48,0	0/0:19,0:19:48.01:0,48,438	1/1:3,13:17:41.95:455,42,0	1/1:1,14:16:36.10:410,36,0	0/0:8,0:8:21.01:0,21,192	0/0:19,0:19:54.03:0,54,494	1/1:3,21:24:45.13:519,45,0	0/0:23,0:23:63.02:0,63,577	0/0:23,0:23:44.97:0,45,404	0/0:23,0:23:60:0,60,540	0/0:10,0:10:24.01:0,24,220	0/0:3,0:3:9:0,9,82	1/1:2,19:21:57.17:658,57,0	1/1:2,10:12:27.08:312,27,0	0/0:15,0:15:36.01:0,36,329	1/1:2,22:24:66.18:748,66,0	1/1:3,13:16:33.10:381,33,0	1/1:7,11:18:33.10:381,33,0
chr10	18560137	.	C	CTTTTT	7032.96	PASS	AB=0.595;AC=27;AF=0.482;AN=56;BaseQRankSum=-9.540;DP=565;FS=0.412;HRun=11;HaplotypeScore=122.7372;InbreedingCoeff=0.8463;MQ=69.52;MQ0=0;MQRankSum=-6.925;QD=26.84;ReadPosRankSum=-5.106;VQSLOD=1.9861;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,12:23:30.10:679,30,0	0/0:1,0:7:14.81:0,15,53	0/0:11,0:10:4.45:0,4,89	0/0:11,0:9:8.91:0,9,127	0/0:8,0:40:40.61:0,41,372	1/1:8,12:24:45.15:993,45,0	1/1:9,2:13:15.05:296,15,0	1/1:20,1:38:56.47:945,56,0	0/0:18,0:19:44.93:0,45,660	0/0:11,0:35:2.76:0,3,113	0/0:8,0:29:25.43:0,25,136	1/1:2,8:11:6.02:164,6,0	0/0:3,0:21:37.38:0,37,135	0/0:7,0:18:22.65:0,23,117	1/1:6,14:21:30.10:777,30,0	1/1:4,6:10:5.87:164,6,0	0/0:1,0:27:46.09:0,46,185	1/1:5,8:13:16.87:394,17,0	1/1:1,2:10:27.07:492,27,0	1/1:9,1:30:57.15:914,57,0	1/1:5,0:16:18.06:280,18,0	1/1:3,4:8:18.06:397,18,0	0/0:7,0:20:36.43:0,36,204	0/0:3,0:11:17.33:0,17,63	1/1:4,14:20:23.37:529,23,0	0/1:8,0:25:8.29:8,0,53	0/0:12,0:34:52.53:0,53,203	0/0:3,0:20:37.06:0,37,135
chr10	18560587	.	TAG	T	9554.30	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=12.530;DP=544;FS=8.802;HRun=0;HaplotypeScore=71.1462;InbreedingCoeff=0.9866;MQ=98.75;MQ0=0;MQRankSum=-8.125;QD=44.86;ReadPosRankSum=5.686;VQSLOD=6.1033;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:78.25:0,78,1533	1/1:0,4:4:12.04:195,12,0	0/0:29,0:29:80.86:0,81,1556	0/0:27,0:27:71.59:0,72,1287	1/1:0,10:10:21.07:343,21,0	0/0:17,0:17:51.17:0,51,1024	0/0:34,0:34:99:0,99,1931	0/0:24,0:24:63.22:0,63,1252	0/0:14,0:14:42.14:0,42,852	1/1:0,20:20:60.19:954,60,0	1/1:0,13:13:36.12:577,36,0	0/0:25,0:25:75.26:0,75,1522	1/1:0,21:21:54.18:881,54,0	1/1:0,16:16:48.16:783,48,0	0/0:16,0:16:48.16:0,48,964	0/0:12,0:12:36.12:0,36,731	1/1:0,40:40:99:1713,105,0	0/0:26,0:26:78.27:0,78,1583	0/0:12,0:12:36.12:0,36,701	0/0:11,0:11:33.10:0,33,623	0/0:24,0:24:69.24:0,69,1370	0/0:16,0:16:48.15:0,48,929	1/1:0,10:10:24.08:392,24,0	1/1:0,27:27:81.28:1321,81,0	0/0:18,0:18:48.16:0,48,974	1/1:0,22:22:60.20:979,60,0	1/1:0,26:27:79.51:1272,80,0	1/1:0,3:3:9.03:145,9,0
chr10	18562807	.	A	AC	1298.46	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-4.094;DP=684;FS=1.432;HRun=1;HaplotypeScore=93.3571;InbreedingCoeff=0.9978;MQ=92.37;MQ0=0;MQRankSum=-3.422;QD=37.10;ReadPosRankSum=3.493;VQSLOD=4.0298;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,33:35:93.32:1393,93,0	0/0:13,0:13:36.12:0,36,467	0/0:28,0:28:57.63:0,58,909	0/0:29,0:29:78.15:0,78,976	0/0:22,0:22:63.20:0,63,818	0/0:23,0:23:66.21:0,66,857	0/0:28,0:28:84.27:0,84,1091	0/0:29,0:29:87.26:0,87,1113	0/0:23,0:23:69.21:0,69,882	0/0:27,0:27:81.26:0,81,1042	0/0:9,0:9:24.08:0,24,312	0/0:19,0:19:57.17:0,57,726	0/0:32,0:32:90.28:0,90,1154	0/0:30,0:30:90.29:0,90,1167	0/0:19,0:19:57.19:0,57,739	0/0:23,0:23:69.22:0,69,896	0/0:26,0:26:72.22:0,72,922	0/0:22,0:22:66.21:0,66,855	0/0:21,0:21:63.20:0,63,806	0/0:21,0:21:60.16:0,60,761	0/0:31,0:31:90.20:0,90,1107	0/0:24,0:24:72.21:0,72,907	0/0:16,0:16:48.12:0,48,605	0/0:27,0:27:81.24:0,81,1024	0/0:28,0:28:84.26:0,84,1077	0/0:32,0:32:93.29:0,93,1191	0/0:34,0:32:99:0,102,1295	0/0:13,0:13:39.13:0,39,506
chr10	18564870	.	C	CACT	16831.41	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-16.594;DP=659;FS=1.307;HRun=0;HaplotypeScore=151.6104;InbreedingCoeff=0.9998;MQ=82.73;MQ0=0;MQRankSum=-3.507;QD=59.47;ReadPosRankSum=0.784;VQSLOD=5.7357;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,117,1999	0/0:12,0:12:36.12:0,36,634	0/0:25,0:25:60.15:0,60,998	0/0:19,0:19:33.22:0,33,624	0/0:21,0:21:60.08:0,60,933	1/1:0,19:19:54.19:1275,54,0	1/1:2,27:29:78:1789,78,0	1/1:0,19:21:63.17:1317,63,0	0/0:30,0:30:87.28:0,87,1505	0/0:31,0:31:87.26:0,87,1473	0/0:12,0:12:30.47:0,30,432	1/1:3,25:28:66.23:1539,66,0	0/0:21,0:21:57.14:0,57,916	0/0:29,0:29:87.28:0,87,1501	1/1:0,28:30:75.26:1771,75,0	1/1:1,21:23:60.21:1402,60,0	0/0:24,0:24:69.15:0,69,1152	1/1:3,13:17:42.14:955,42,0	1/1:4,22:27:78.22:1679,78,0	1/1:2,20:23:60.21:1349,60,0	1/1:2,24:28:72.25:1699,72,0	1/1:2,16:18:39.13:903,39,0	0/0:15,0:15:45.02:0,45,665	0/0:25,0:25:72.25:0,72,1256	1/1:3,17:20:51.18:1154,51,0	0/0:28,0:28:81.26:0,81,1376	0/0:30,0:30:87.27:0,87,1475	0/0:12,0:12:36.10:0,36,604
chr10	18565173	.	CT	C	1016.85	PASS	AB=0.837;AC=18;AF=0.321;AN=56;BaseQRankSum=0.722;DP=690;FS=3.611;HRun=16;HaplotypeScore=106.0606;InbreedingCoeff=0.5685;MQ=60.23;MQ0=13;MQRankSum=1.424;QD=3.75;ReadPosRankSum=3.903;VQSLOD=1.0874;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,1:41:27.55:122,28,0	0/0:13,1:14:7.31:0,7,158	0/0:16,0:8:2.23:0,2,10	0/1:18,0:13:6.18:6,0,34	0/0:28,1:30:0.23:0,0,168	1/1:4,14:21:16.31:190,16,0	1/1:21,6:30:15.57:169,16,0	0/0:20,0:30:26.16:0,26,139	0/0:32,1:33:41:0,41,447	0/0:22,0:21:31.89:0,32,259	0/0:20,0:20:11.17:0,11,173	0/1:16,5:21:17.13:110,0,17	0/0:27,0:29:13.18:0,13,276	0/0:23,1:24:20.94:0,21,219	1/1:9,7:15:17.53:106,18,0	1/1:20,4:25:8.48:148,8,0	0/0:38,0:38:66.08:0,66,513	1/1:18,4:21:27.32:153,27,0	0/0:26,0:27:7.83:0,8,136	0/0:17,0:20:27.85:0,28,149	0/0:11,0:17:14.45:0,14,84	1/1:15,0:16:9.38:50,9,0	0/0:15,0:15:19.10:0,19,201	0/0:35,0:35:23.84:0,24,315	0/1:13,15:28:43.27:111,0,43	0/1:28,4:32:41.64:42,0,263	0/0:25,2:26:22.75:0,23,334	0/0:10,0:11:20.78:0,21,160
chr10	18565624	.	AAC	A	18214.94	PASS	AB=0.531;AC=47;AF=0.839;AN=56;BaseQRankSum=9.960;DP=597;FS=0.000;HRun=0;HaplotypeScore=106.7943;InbreedingCoeff=0.8623;MQ=87.24;MQ0=1;MQRankSum=-9.146;QD=38.03;ReadPosRankSum=1.975;VQSLOD=6.7894;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,138,2480	1/1:1,11:12:33.11:473,33,0	0/0:28,0:28:69.88:0,70,1314	0/0:20,0:20:54.17:0,54,921	1/1:1,19:20:54.14:750,54,0	1/1:0,25:25:75.25:1068,75,0	1/1:2,22:24:69.22:965,69,0	1/1:4,22:26:69.22:965,69,0	0/0:24,0:24:72.25:0,72,1294	1/1:0,22:22:66.18:891,66,0	1/1:0,9:9:24.04:321,24,0	1/1:1,21:21:63.20:884,63,0	1/1:3,26:29:75.25:1074,75,0	1/1:0,26:26:75.25:1072,75,0	1/1:1,16:17:48.16:687,48,0	0/1:2,15:17:3.81:633,0,4	1/1:2,39:41:99:1462,102,0	1/1:3,20:23:63.17:876,63,0	1/1:3,14:17:48.16:680,48,0	1/1:2,16:18:51.12:679,51,0	1/1:4,13:17:35.99:444,36,0	1/1:3,16:19:54.17:749,54,0	1/1:1,17:18:38.82:558,39,0	1/1:0,16:16:39.13:559,39,0	1/1:4,18:22:57.18:795,57,0	1/1:0,23:23:69.23:986,69,0	1/1:0,15:15:42.14:601,42,0	1/1:0,1:1:3.01:43,3,0
chr10	18565647	.	T	TG	7528.45	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-3.327;DP=623;FS=5.527;HRun=6;HaplotypeScore=132.4862;InbreedingCoeff=0.9841;MQ=90.30;MQ0=0;MQRankSum=-12.009;QD=28.20;ReadPosRankSum=-2.596;VQSLOD=2.5559;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,123,1255	0/0:15,0:15:42.09:0,42,429	0/0:25,0:25:62.16:0,62,612	0/0:29,0:29:74.44:0,74,705	0/0:17,0:17:48.09:0,48,482	1/1:4,18:22:51.15:629,51,0	1/1:2,24:26:66.21:830,66,0	1/1:10,18:28:51.16:640,51,0	0/0:27,0:27:72.16:0,72,734	0/0:24,0:24:60.12:0,60,608	0/0:8,0:8:21.04:0,21,214	1/1:3,20:23:60.19:751,60,0	0/0:30,0:30:84.15:0,84,842	0/0:27,0:27:69.13:0,69,696	1/1:4,18:22:51.16:641,51,0	1/1:3,19:22:23.56:601,24,0	0/0:30,0:30:81.18:0,81,826	1/1:5,22:27:72.23:903,72,0	1/1:2,13:15:42.13:528,42,0	1/1:5,15:20:51.15:625,51,0	1/1:7,14:21:22.23:248,22,0	1/1:2,23:25:54.17:679,54,0	0/0:18,0:18:35.82:0,36,360	0/0:18,0:18:45.10:0,45,458	1/1:2,14:16:36.12:452,36,0	0/0:29,0:29:72.15:0,72,734	0/0:15,0:15:42.08:0,42,422	0/0:2,0:2:6.01:0,6,61
chr10	18566726	.	G	GAACAATTCCAACTTCTGC	1393.78	PASS	AB=0.667;AC=23;AF=0.958;AN=24;BaseQRankSum=-1.561;DP=31;FS=5.229;HRun=0;HaplotypeScore=26.1482;InbreedingCoeff=-0.2076;MQ=155.59;MQ0=0;MQRankSum=-1.214;QD=49.78;ReadPosRankSum=0.347;VQSLOD=1.4211;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	1/1:3,1:7:17.99:783,18,0	0/1:2,0:4:25.42:279,0,25	1/1:3,0:3:2.97:20,3,0	./.	./.	1/1:2,0:2:3.01:56,3,0	./.	1/1:2,0:2:3:29,3,0	1/1:1,0:1:3.01:39,3,0	1/1:1,0:1:3:25,3,0	1/1:1,0:1:3.01:51,3,0	./.	./.	1/1:1,0:1:3.01:53,3,0	1/1:2,0:2:3.01:50,3,0	./.	./.	./.	1/1:3,0:3:6.01:64,6,0	1/1:1,0:1:3:25,3,0	./.	./.	./.	./.	./.	./.
chr10	18567345	.	ATGTGTGTG	A	3781.22	PASS	AB=0.870;AC=23;AF=0.442;AN=52;BaseQRankSum=-4.848;DP=409;FS=32.286;HRun=0;HaplotypeScore=128.7765;InbreedingCoeff=0.7425;MQ=48.55;MQ0=29;MQRankSum=-3.115;QD=21.01;ReadPosRankSum=2.474;VQSLOD=1.2778;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:23:20.16:0,20,354	1/1:2,4:5:11.96:245,12,0	./.	0/0:13,0:5:6.02:0,6,76	1/1:9,14:22:14.97:321,15,0	0/0:20,0:20:12.47:0,12,234	0/0:18,0:16:9.49:0,9,261	0/0:26,0:25:20.66:0,21,323	0/0:12,0:12:15.03:0,15,507	1/1:11,11:21:29.09:610,29,0	1/1:5,10:13:11.96:226,12,0	0/0:8,0:7:6.02:0,6,202	1/1:7,5:11:6.02:153,6,0	1/1:3,3:6:12:248,12,0	0/0:15,0:12:14.08:0,14,308	0/0:9,0:9:9.03:0,9,168	0/1:17,3:17:19.35:380,0,19	0/0:15,0:14:20.86:0,21,453	0/0:21,0:19:26.66:0,27,293	0/0:13,0:13:15.01:0,15,339	0/0:10,0:10:8.62:0,9,142	./.	1/1:7,0:7:6.02:122,6,0	1/1:3,11:14:9.03:229,9,0	0/0:7,0:7:3.01:0,3,38	1/1:12,11:22:33.11:756,33,0	1/1:12,9:21:17.84:416,18,0	1/1:2,6:7:3.01:76,3,0
chr10	18567380	.	TG	T	625.37	PASS	AB=0.932;AC=19;AF=0.339;AN=56;BaseQRankSum=4.435;DP=493;FS=2.098;HRun=2;HaplotypeScore=110.9776;InbreedingCoeff=-0.0185;MQ=53.77;MQ0=47;MQRankSum=-0.921;QD=2.41;ReadPosRankSum=-0.283;VQSLOD=-0.4241;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:21,5:22:99:112,0,259	0/0:10,0:10:5.41:0,5,140	0/0:50,0:20:28.60:0,29,549	0/0:41,0:19:48.41:0,48,547	0/0:25,0:25:19.99:0,20,291	0/1:16,1:17:11.22:35,0,11	1/1:9,4:11:5.05:52,5,0	0/1:22,1:21:13.33:13,0,106	0/0:9,0:9:24.08:0,24,331	0/0:21,0:17:35.55:0,36,313	0/0:20,0:19:3.60:0,4,212	1/1:10,1:10:1.96:23,2,0	0/0:8,0:8:13.37:0,13,118	0/0:5,0:5:8.85:0,9,57	1/1:12,2:11:1.69:83,2,0	0/1:8,0:8:4.56:5,0,13	0/1:24,2:24:71.96:72,0,430	0/1:19,3:20:45.32:90,0,45	0/1:14,5:13:40.33:130,0,40	0/1:12,0:11:4.89:6,0,5	1/1:13,1:12:1.84:41,2,0	0/0:7,1:6:0:0,0,0	0/1:10,0:9:19.46:19,0,140	0/1:18,2:20:57.54:58,0,84	0/0:9,0:9:5.61:0,6,14	0/1:24,0:20:40.41:40,0,276	0/0:16,0:16:28.47:0,28,226	0/0:12,0:12:20.35:0,20,206
chr10	18567381	.	G	GT	986.19	PASS	AB=0.932;AC=20;AF=0.357;AN=56;BaseQRankSum=3.631;DP=489;FS=0.605;HRun=1;HaplotypeScore=110.3141;InbreedingCoeff=0.0543;MQ=54.29;MQ0=46;MQRankSum=-1.816;QD=3.85;ReadPosRankSum=0.159;VQSLOD=0.0000;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:23,3:22:99:111,0,228	0/0:10,0:10:6.94:0,7,169	0/0:50,0:20:28.14:0,28,552	0/0:42,0:20:51.41:0,51,558	0/0:25,0:25:22.27:0,22,333	0/1:14,3:17:10.73:55,0,11	1/1:11,2:11:5.61:135,6,0	0/1:6,0:20:13.27:13,0,105	0/0:10,0:10:24.08:0,24,323	0/0:20,0:16:40.18:0,40,393	0/0:19,0:18:23.97:0,24,263	1/1:5,6:10:2.52:72,3,0	0/0:8,0:8:14.96:0,15,147	0/0:5,0:5:10.52:0,11,87	1/1:11,5:13:4.89:130,5,0	0/1:6,2:8:11.60:29,0,12	0/1:22,3:24:72.32:72,0,478	0/1:19,3:20:42.93:186,0,43	0/1:18,0:12:38.93:133,0,39	1/1:10,1:10:3.41:58,3,0	1/1:14,0:12:2.19:59,2,0	0/0:5,3:6:0:0,0,0	0/1:10,0:9:19.46:19,0,143	0/1:20,0:20:55.27:55,0,124	0/0:7,1:8:3.40:0,3,10	0/1:23,0:19:19.70:20,0,372	0/0:16,0:16:32.08:0,32,296	0/0:12,0:12:20.95:0,21,221
chr10	18567454	.	TTTTTG	T	3754.76	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=3.050;DP=455;FS=0.509;HRun=0;HaplotypeScore=102.5841;InbreedingCoeff=0.9157;MQ=70.80;MQ0=1;MQRankSum=-3.777;QD=25.37;ReadPosRankSum=1.113;VQSLOD=3.4958;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,22:26:54.10:929,54,0	0/0:12,0:12:21.07:0,21,599	0/0:24,0:20:33.09:0,33,704	0/0:39,0:25:24.14:0,24,462	0/0:27,0:27:54.19:0,54,1515	1/1:6,4:10:12.04:222,12,0	1/1:4,5:9:18.01:266,18,0	1/1:13,6:19:18.06:333,18,0	0/0:19,0:19:48.16:0,48,1321	0/0:11,0:11:27.09:0,27,732	0/0:23,0:23:45.15:0,45,1271	1/1:6,3:9:12.04:222,12,0	0/0:16,0:16:36.12:0,36,1027	0/0:9,0:9:21.07:0,21,585	1/1:4,3:7:18.06:320,18,0	1/1:2,3:5:9.03:167,9,0	0/0:25,0:25:51.16:0,51,1395	1/1:8,1:9:3.90:58,4,0	1/1:6,9:14:24.08:445,24,0	1/1:6,7:13:21.03:354,21,0	1/1:14,1:15:2.98:56,3,0	1/1:1,6:7:12.04:222,12,0	0/0:13,0:13:24.08:0,24,642	0/0:22,0:22:39.09:0,39,1032	1/1:2,2:4:9.03:160,9,0	0/0:29,0:29:78.27:0,78,2187	0/0:24,0:23:54.18:0,54,1487	0/0:13,0:13:12.04:0,12,285
chr10	18567500	.	A	AT	5891.32	PASS	AB=0.990;AC=26;AF=0.464;AN=56;BaseQRankSum=-13.748;DP=578;FS=9.066;HRun=10;HaplotypeScore=108.4524;InbreedingCoeff=0.8622;MQ=82.97;MQ0=0;MQRankSum=6.186;QD=16.64;ReadPosRankSum=2.255;VQSLOD=4.4185;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:56.90:0,57,461	1/1:1,8:9:21.05:222,21,0	0/1:46,1:38:14.67:15,0,124	0/1:53,0:36:2.76:3,0,140	1/1:3,21:25:50.92:514,51,0	0/0:0,0:13:24.44:0,24,71	0/0:1,0:13:24.44:0,24,71	0/0:8,0:30:46.65:0,47,150	0/0:17,0:17:35.95:0,36,296	1/1:2,17:21:56.78:556,57,0	1/1:2,16:18:47.91:469,48,0	0/0:2,0:9:14.26:0,14,41	1/1:4,14:18:39.10:416,39,0	1/1:3,13:18:41.81:412,42,0	0/0:0,0:11:14.26:0,14,41	0/0:0,0:14:28.52:0,29,83	1/1:4,17:21:36.09:384,36,0	0/0:2,0:15:22.88:0,23,66	0/0:5,0:20:30.55:0,31,89	0/0:2,0:17:28.99:0,29,84	0/0:0,0:14:22.40:0,22,65	0/0:3,0:19:32.58:0,33,94	1/1:0,13:13:33.08:352,33,0	1/1:5,16:21:39.10:416,39,0	0/0:2,0:7:6.10:0,6,18	1/1:5,35:40:81.19:1045,81,0	1/1:8,28:36:44.94:680,45,0	1/1:1,11:14:41.80:409,42,0
chr10	18567807	.	C	CAT	13641.99	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=20.711;DP=750;FS=2.760;HRun=0;HaplotypeScore=143.8413;InbreedingCoeff=0.9995;MQ=84.76;MQ0=0;MQRankSum=-7.269;QD=48.38;ReadPosRankSum=0.153;VQSLOD=5.1656;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,144,2200	0/0:13,0:13:36.12:0,36,550	0/0:22,0:22:56.77:0,57,792	0/0:31,0:31:86.78:0,87,1278	0/0:25,0:25:75.24:0,75,1126	1/1:0,9:9:27.09:497,27,0	1/1:5,22:28:66.23:1190,66,0	1/1:10,16:26:72.22:1234,72,0	0/0:39,0:39:99:0,111,1691	0/0:29,0:29:84.27:0,84,1265	0/0:26,0:26:75.24:0,75,1118	1/1:1,28:29:81.28:1476,81,0	0/0:39,0:39:99:0,114,1717	0/0:40,0:40:99:0,120,1808	1/1:1,21:22:54.19:985,54,0	1/1:0,21:22:57.20:1050,57,0	0/0:29,0:29:84.27:0,84,1260	1/1:1,25:26:72.25:1315,72,0	1/1:2,20:22:63.19:1068,63,0	1/1:0,22:22:66.23:1218,66,0	1/1:5,38:43:99:1935,108,0	1/1:2,13:16:42.14:747,42,0	0/0:17,0:17:48.16:0,48,735	0/0:39,0:39:99:0,111,1698	1/1:0,17:17:51.17:929,51,0	0/0:28,0:28:78.26:0,78,1194	0/0:35,0:35:99:0,102,1511	0/0:8,0:8:24.06:0,24,340
chr10	18569123	.	A	AGT	831	PASS	AB=0.945;AC=26;AF=0.650;AN=40;BaseQRankSum=0.933;DP=456;FS=1.703;HRun=0;HaplotypeScore=100.0441;InbreedingCoeff=0.1346;MQ=68.55;MQ0=19;MQRankSum=-1.311;QD=3.14;ReadPosRankSum=-2.122;VQSLOD=2.1603;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	1/1:8,2:11:3.01:45,3,0	./.	0/0:24,0:25:2.72:0,3,16	0/0:22,0:21:2.67:0,3,23	./.	0/1:14,1:15:7.58:82,0,8	1/1:4,4:7:6.02:89,6,0	0/1:10,0:10:0:0,0,0	0/1:7,4:11:26.49:38,0,26	1/1:21,0:21:5.99:61,6,0	1/1:10,0:10:0.47:1,0,0	./.	0/1:27,0:25:56.88:144,0,57	1/1:13,0:13:5.50:27,5,0	0/0:13,0:12:2.74:0,3,12	1/1:10,0:9:5.85:33,6,0	0/1:32,0:31:7.85:39,0,8	0/0:12,0:12:0:0,0,0	./.	1/1:25,11:35:8.99:109,9,0	0/1:11,0:11:0.01:0,0,0	1/1:26,0:26:24.84:209,25,0	1/1:12,2:15:3.48:45,3,0	1/1:6,2:8:2.97:20,3,0
chr10	18569161	.	TGTGTGC	T	302.39	PASS	AB=0.972;AC=10;AF=0.217;AN=46;BaseQRankSum=0.171;DP=367;FS=13.160;HRun=0;HaplotypeScore=65.0835;InbreedingCoeff=0.1911;MQ=36.01;MQ0=28;MQRankSum=0.090;QD=2.56;ReadPosRankSum=-0.880;VQSLOD=0.3338;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:21:3:0,3,25	0/0:4,0:4:4.35:0,4,27	./.	./.	0/0:8,0:8:6.02:0,6,140	./.	0/1:25,0:25:18.35:37,0,18	0/1:14,0:13:26.96:93,0,27	0/0:8,0:7:2.80:0,3,13	0/0:17,0:17:43.34:0,43,705	0/0:9,0:8:6.02:0,6,145	0/0:13,0:12:0.47:0,0,1	0/0:7,0:7:11.93:0,12,215	0/0:18,0:18:8.72:0,9,192	./.	0/1:8,1:9:0:0,0,0	0/0:23,0:21:20.49:0,20,575	0/1:9,0:8:63.92:76,0,64	0/1:10,0:9:38.08:38,0,52	./.	1/1:21,0:19:12.02:153,12,0	1/1:15,1:15:3:26,3,0	0/0:5,0:5:3.01:0,3,50	0/0:24,0:23:12:0,12,238	0/1:13,1:13:0.02:0,0,0	0/0:20,0:18:46.98:0,47,802	0/0:16,0:15:15.15:0,15,262	0/0:9,0:8:9.80:0,10,90
chr10	18569164	.	G	GCA	125.30	PASS	AB=0.788;AC=7;AF=0.175;AN=40;BaseQRankSum=3.376;DP=342;FS=10.268;HRun=0;HaplotypeScore=59.8231;InbreedingCoeff=0.3279;MQ=35.57;MQ0=21;MQRankSum=-1.373;QD=1.69;ReadPosRankSum=2.165;VQSLOD=0.1118;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	0/0:8,0:8:4.55:0,5,29	./.	1/1:7,15:23:3:28,3,0	0/0:11,0:10:22.88:0,23,142	0/0:8,0:7:3.01:0,3,37	0/0:17,0:17:32.09:0,32,441	0/0:9,0:8:2.97:0,3,8	0/0:10,2:12:0.47:0,0,1	0/0:7,0:7:8.81:0,9,81	0/0:17,0:17:8.80:0,9,82	./.	1/1:6,3:9:0.47:1,0,0	0/0:22,0:20:26.44:0,26,277	0/1:5,3:7:6.14:138,0,6	0/0:11,0:10:18.14:0,18,146	./.	0/1:20,0:19:4.77:53,0,5	./.	0/0:5,0:5:3.01:0,3,42	0/0:24,0:23:4.35:0,4,20	0/1:6,8:13:0:0,0,0	0/0:20,0:18:39.84:0,40,335	0/0:14,0:13:14.35:0,14,195	0/0:9,0:8:9.45:0,9,97
chr10	18569171	.	C	CGT	585.05	PASS	AB=0.898;AC=12;AF=0.286;AN=42;BaseQRankSum=2.906;DP=295;FS=7.050;HRun=0;HaplotypeScore=53.4193;InbreedingCoeff=0.3680;MQ=34.55;MQ0=10;MQRankSum=0.173;QD=5.13;ReadPosRankSum=0.507;VQSLOD=1.3207;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:17,0:16:0:0,0,0	./.	./.	./.	0/0:6,0:6:0:0,0,0	./.	1/1:22,0:22:0.47:1,0,0	0/1:4,9:13:10.05:167,0,10	0/0:7,0:6:3:0,3,29	0/0:17,0:17:26.03:0,26,372	0/0:7,0:6:0.94:0,1,3	0/1:11,0:11:0:0,0,0	0/0:6,0:6:5.75:0,6,58	0/0:14,0:14:4.69:0,5,47	./.	0/0:6,1:7:0:0,0,0	0/0:18,0:16:12.92:0,13,141	1/1:6,0:7:4.96:208,5,0	1/1:4,0:11:1.23:123,1,0	./.	1/1:9,3:18:12.44:190,12,0	0/0:14,0:13:1.55:0,2,4	./.	0/0:21,0:21:2.91:0,3,44	0/1:14,0:13:0.01:0,0,0	0/0:12,0:10:19.24:0,19,192	0/0:11,0:11:0.21:0,0,118	0/0:8,0:7:6.02:0,6,71
chr10	18571957	.	AGT	A	3985.79	PASS	AB=0.855;AC=26;AF=0.464;AN=56;BaseQRankSum=-8.127;DP=711;FS=9.514;HRun=0;HaplotypeScore=146.6798;InbreedingCoeff=0.7648;MQ=65.96;MQ0=9;MQRankSum=3.224;QD=13.42;ReadPosRankSum=3.172;VQSLOD=2.9623;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:41:21.47:0,21,184	1/1:1,6:7:8.61:100,9,0	0/0:32,0:23:2.92:0,3,17	0/0:33,0:20:0.88:0,1,2	1/1:11,13:24:30.08:334,30,0	0/1:11,0:20:11.99:12,0,109	0/0:16,0:28:21:0,21,199	0/0:34,0:34:24.30:0,24,207	1/1:10,8:18:27.07:300,27,0	0/1:16,11:27:12.46:281,0,12	1/1:5,9:14:18.05:200,18,0	0/0:11,0:30:51.03:0,51,521	1/1:4,17:21:42.11:467,42,0	1/1:12,19:33:50.97:548,51,0	0/0:5,0:26:38.96:0,39,334	0/0:5,0:18:21:0,21,183	1/1:14,6:21:23.90:247,24,0	0/0:5,0:21:32.97:0,33,283	0/0:32,0:31:26.44:0,26,214	0/0:12,0:21:2.98:0,3,25	0/0:41,0:40:21.42:0,21,171	0/0:17,0:33:35.93:0,36,340	1/1:7,9:17:21.06:234,21,0	1/1:13,15:29:42.25:428,42,0	0/0:13,0:23:21.01:0,21,219	1/1:12,9:22:23.89:247,24,0	1/1:12,9:29:58.97:521,59,0	1/1:10,3:12:6.02:67,6,0
chr10	18573602	.	GCAC	G	247.43	PASS	AC=10;AF=0.500;AN=20;BaseQRankSum=0.610;DP=126;FS=5.729;HRun=0;HaplotypeScore=59.7838;InbreedingCoeff=0.5889;MQ=140.56;MQ0=8;MQRankSum=-1.591;QD=22.49;ReadPosRankSum=-4.156;VQSLOD=2.0416;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:40,0:30:87.30:0,87,2039	0/0:28,0:21:47.75:0,48,911	./.	./.	1/1:2,0:1:3.01:49,3,0	./.	0/0:38,0:38:99:0,108,2597	1/1:1,0:1:3.01:53,3,0	./.	./.	./.	./.	1/1:2,0:1:3.01:49,3,0	0/0:2,0:2:3.01:0,3,74	./.	./.	1/1:1,4:5:12.02:148,12,0	./.	0/0:2,0:2:0.89:0,1,2	./.	./.	./.	./.	./.	./.	1/1:1,0:1:3.01:47,3,0
chr10	18574134	.	AGTGT	A	2873.50	PASS	AB=0.691;AC=22;AF=0.407;AN=54;BaseQRankSum=-2.044;DP=412;FS=5.220;HRun=0;HaplotypeScore=103.0123;InbreedingCoeff=0.6712;MQ=58.39;MQ0=13;MQRankSum=3.646;QD=17.85;ReadPosRankSum=4.456;VQSLOD=2.6015;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:18:14.16:0,14,276	1/1:3,5:8:6.34:95,6,0	./.	0/0:29,0:22:3.01:0,3,42	1/1:5,6:12:6.49:96,6,0	0/0:20,0:28:12.03:0,12,181	0/0:16,0:18:14.04:0,14,176	0/0:19,0:18:18.04:0,18,296	0/0:11,0:11:24.08:0,24,527	1/1:8,4:13:27.08:387,27,0	0/1:5,5:11:5.76:180,0,6	0/0:6,0:11:10.04:0,10,116	1/1:7,5:12:12.04:189,12,0	1/1:5,2:7:6.02:95,6,0	0/0:5,0:6:6.02:0,6,104	0/0:7,0:10:6.02:0,6,104	1/1:11,7:17:14.96:237,15,0	0/0:9,0:12:8.99:0,9,115	0/0:14,0:14:6.01:0,6,83	0/0:12,0:15:9.15:0,9,144	0/0:15,0:14:5.20:0,5,104	0/0:5,0:10:13.56:0,14,170	1/1:3,5:8:9.03:141,9,0	0/1:12,6:18:30.85:219,0,31	0/0:9,0:12:8.94:0,9,156	1/1:5,6:12:30.03:425,30,0	1/1:8,8:16:29.93:412,30,0	1/1:10,10:23:32.62:591,33,0
chr10	18574198	.	CAT	C	141.54	PASS	AB=0.889;AC=5;AF=0.093;AN=54;BaseQRankSum=3.717;DP=269;FS=0.000;HRun=0;HaplotypeScore=56.1383;InbreedingCoeff=0.4882;MQ=63.54;MQ0=7;MQRankSum=-0.524;QD=4.57;ReadPosRankSum=0.524;VQSLOD=1.9666;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,11:15:18.06:223,18,0	0/0:5,0:5:12.04:0,12,195	1/1:8,0:4:2.68:12,3,0	0/0:14,0:7:2.34:0,2,8	0/0:12,0:12:24.08:0,24,385	0/0:11,0:10:27.09:0,27,429	0/0:8,0:8:18.05:0,18,265	0/0:28,0:28:63.20:0,63,982	0/0:7,0:7:15.05:0,15,240	0/0:10,0:11:27.07:0,27,395	0/1:7,1:8:16.11:16,0,271	0/0:3,0:3:6.02:0,6,98	0/0:4,0:4:6.02:0,6,98	0/0:6,0:6:9.03:0,9,144	0/0:6,0:6:15.04:0,15,216	0/0:8,0:8:24.08:0,24,390	0/0:17,0:17:42.14:0,42,675	0/0:9,0:9:21.07:0,21,341	0/0:9,0:9:21.07:0,21,337	0/0:11,0:10:20.86:0,21,338	0/0:4,0:3:5.71:0,6,98	0/0:3,0:3:0.94:0,1,1	./.	0/0:2,0:2:3.01:0,3,49	0/0:13,0:12:30.10:0,30,484	0/0:12,0:12:30.10:0,30,481	0/0:15,0:15:36.12:0,36,587	0/0:20,0:20:39.13:0,39,618
chr10	18574901	.	A	AC	4795.55	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-12.131;DP=632;FS=6.902;HRun=8;HaplotypeScore=62.3266;InbreedingCoeff=0.9533;MQ=72.05;MQ0=0;MQRankSum=-2.920;QD=25.11;ReadPosRankSum=2.392;VQSLOD=5.7340;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,0:13:3.07:11,3,0	0/0:5,0:5:15.01:0,15,137	0/0:18,0:18:38.92:0,39,336	0/0:25,0:24:44.88:0,45,386	0/0:22,0:22:62.96:0,63,565	1/1:2,20:23:35.57:645,36,0	1/1:2,22:25:63.02:707,63,0	0/0:33,0:33:78:0,78,709	0/0:28,0:28:78.03:0,78,714	0/0:24,0:25:69.03:0,69,628	0/0:24,0:24:66.02:0,66,600	1/1:1,23:24:66.20:761,66,0	0/0:34,0:34:93.48:0,93,841	0/0:16,1:17:7.39:0,7,318	1/1:3,26:29:69.21:796,69,0	1/1:3,25:28:69.04:792,69,0	0/0:27,0:27:66.03:0,66,604	1/1:2,9:11:26.75:288,27,0	0/0:22,0:22:54.01:0,54,491	0/0:18,0:18:45.02:0,45,412	0/0:25,0:25:53.96:0,54,482	1/1:4,13:18:36.10:408,36,0	0/0:23,0:23:56.99:0,57,515	0/0:27,0:27:75.02:0,75,682	1/1:1,18:19:11.65:388,12,0	0/0:29,0:29:81.03:0,81,738	0/0:28,0:27:78.02:0,78,707	0/0:11,0:11:32.97:0,33,294
chr10	18575125	.	TGTGAGAGA	T	4001.25	PASS	AB=0.740;AC=21;AF=0.375;AN=56;BaseQRankSum=-4.065;DP=571;FS=10.665;HRun=0;HaplotypeScore=154.3352;InbreedingCoeff=0.4600;MQ=51.94;MQ0=17;MQRankSum=4.319;QD=14.14;ReadPosRankSum=1.091;VQSLOD=2.3126;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:30:28.86:0,29,233	1/1:1,4:5:3.48:88,3,0	0/0:11,0:2:2.94:0,3,18	0/0:11,0:1:0.47:0,0,1	1/1:21,1:22:35.51:367,36,0	0/0:21,0:20:3.01:0,3,95	0/0:35,0:34:46.23:0,46,584	0/0:29,0:29:71.32:0,71,630	0/1:20,0:20:17.91:18,0,847	1/1:9,21:24:45.86:523,46,0	1/1:2,16:18:5.85:56,6,0	0/0:14,0:12:11.98:0,12,99	0/1:3,20:23:10.28:262,0,10	0/1:7,12:19:11.97:78,0,12	0/0:21,0:20:20.96:0,21,391	0/0:16,0:15:11.43:0,11,291	1/1:26,0:26:68.93:859,69,0	0/0:17,0:16:40.85:0,41,438	0/0:12,0:9:19.80:0,20,322	0/0:21,0:19:2.96:0,3,19	0/0:6,0:6:15:0,15,149	0/0:22,0:22:2.30:0,2,109	0/1:27,0:27:2.56:228,0,3	1/1:25,0:25:7.86:232,8,0	0/0:21,0:21:3:0,3,25	1/1:6,24:29:68.65:1059,69,0	0/1:6,26:32:72.18:74,0,72	1/1:6,0:5:14.99:156,15,0
chr10	18575127	.	TGA	T	523.18	PASS	AB=0.893;AC=26;AF=0.542;AN=48;BaseQRankSum=3.503;DP=584;FS=22.275;HRun=0;HaplotypeScore=137.3790;InbreedingCoeff=0.4796;MQ=51.29;MQ0=16;MQRankSum=2.225;QD=1.44;ReadPosRankSum=1.749;VQSLOD=1.1546;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:31:0.26:0,0,0	1/1:5,0:5:2.77:14,3,0	./.	./.	1/1:22,0:22:8.86:62,9,0	0/0:21,0:20:3.01:0,3,39	0/1:34,0:33:8.75:9,0,90	0/0:36,0:36:23.72:0,24,160	0/1:18,3:21:23.37:23,0,122	1/1:29,0:23:11.49:61,11,0	0/1:16,0:18:0.01:0,0,0	0/1:10,0:12:0:0,0,0	1/1:21,0:23:8.58:45,9,0	1/1:20,0:20:2.90:16,3,0	0/0:20,0:21:20.07:0,20,133	0/0:17,0:16:14.16:0,14,108	1/1:24,0:25:26.27:150,26,0	0/0:17,0:16:7.70:0,8,64	0/0:12,0:10:11.92:0,12,87	0/0:21,0:20:0:0,0,0	./.	0/0:24,0:24:2.02:0,2,42	0/1:18,0:26:0.07:0,0,0	1/1:19,7:26:2.97:20,3,0	./.	1/1:29,0:28:36.21:185,36,0	1/1:31,0:32:5.65:32,6,0	1/1:8,0:7:8.84:55,9,0
chr10	18576590	.	A	AT	7724.62	PASS	AB=0.933;AC=27;AF=0.482;AN=56;BaseQRankSum=-7.379;DP=739;FS=8.973;HRun=11;HaplotypeScore=104.4372;InbreedingCoeff=0.9244;MQ=73.74;MQ0=1;MQRankSum=-0.746;QD=20.17;ReadPosRankSum=-1.993;VQSLOD=4.0151;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,27:31:74.98:745,75,0	0/0:7,0:7:14.93:0,15,116	0/0:22,0:16:21.08:0,21,134	0/1:25,0:20:26.11:26,0,47	0/0:32,2:34:49.86:0,50,570	1/1:7,23:31:58.21:597,58,0	1/1:7,26:33:48.92:677,49,0	1/1:7,19:26:36.76:510,37,0	0/0:26,0:26:59.72:0,60,459	0/0:33,1:33:44.22:0,44,525	0/0:16,0:16:41.84:0,42,325	1/1:2,26:30:80.83:789,81,0	0/0:23,1:24:23.33:0,23,363	0/0:21,0:21:44.74:0,45,341	1/1:2,21:24:59.95:593,60,0	1/1:5,29:35:68.97:684,69,0	0/0:29,0:33:83.79:0,84,621	1/1:6,22:30:22.54:561,23,0	1/1:5,17:23:33.69:499,34,0	1/1:3,18:21:57.07:565,57,0	1/1:4,18:22:48.10:487,48,0	1/1:4,18:23:30.67:468,31,0	0/0:23,0:23:47.76:0,48,368	0/0:43,2:45:89.09:0,89,875	1/1:4,20:26:36.55:521,37,0	0/0:25,0:26:64.78:0,65,493	0/0:35,0:35:83.31:0,83,647	0/0:9,0:9:20.91:0,21,162
chr10	18577263	.	G	GA	931.65	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=9.025;DP=598;FS=3.173;HRun=9;HaplotypeScore=63.7298;InbreedingCoeff=0.9743;MQ=75.52;MQ0=0;MQRankSum=-1.530;QD=21.67;ReadPosRankSum=0.469;VQSLOD=4.4673;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,35:42:96.06:1027,96,0	0/0:8,0:8:20.98:0,21,179	0/0:26,0:24:29.98:0,30,286	0/0:14,0:14:14.72:0,15,261	0/0:31,0:31:71.95:0,72,625	0/0:16,0:16:47.95:0,48,409	0/0:22,0:22:50.97:0,51,439	0/0:28,0:28:74.95:0,75,647	0/0:14,0:14:41.96:0,42,357	0/0:23,0:23:56.96:0,57,493	0/0:19,0:19:53.99:0,54,469	0/0:20,0:20:56.97:0,57,491	0/0:20,0:20:59.99:0,60,521	0/0:10,0:10:23.99:0,24,208	0/0:24,0:24:71.95:0,72,617	0/0:22,0:22:32.51:0,33,444	0/0:17,0:17:50.99:0,51,443	0/0:17,0:17:41.98:0,42,365	0/0:20,0:20:50.99:0,51,443	0/0:31,0:32:83:0,83,709	0/0:9,0:9:23.99:0,24,208	0/0:25,0:25:65.94:0,66,563	0/0:17,0:17:47.99:0,48,417	0/0:24,0:24:62.94:0,63,539	0/0:26,0:26:59.95:0,60,516	0/0:30,0:30:86.95:0,87,747	0/0:29,0:29:77.97:0,78,677	0/0:12,0:12:32.98:0,33,286
chr10	18578026	.	G	GGTATCGTGAT	8077.46	PASS	AB=0.887;AC=52;AF=0.929;AN=56;BaseQRankSum=-2.979;DP=674;FS=43.999;HRun=0;HaplotypeScore=372.7333;InbreedingCoeff=-0.1061;MQ=73.09;MQ0=0;MQRankSum=-3.545;QD=11.98;ReadPosRankSum=0.887;VQSLOD=2.5035;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:34,0:34:47.19:324,47,0	1/1:6,0:6:8.58:24,9,0	0/1:14,1:23:99:408,0,250	0/1:19,0:24:99:236,0,399	0/1:28,0:28:24.87:157,0,25	1/1:19,0:19:19.14:115,19,0	1/1:28,0:28:28.48:267,28,0	1/1:25,0:25:67.15:633,67,0	1/1:24,0:24:28.25:84,28,0	1/1:32,0:32:40.36:1047,40,0	1/1:17,0:17:4.89:140,5,0	1/1:23,0:23:21.35:67,21,0	1/1:27,0:27:13.07:109,13,0	1/1:32,0:32:21.72:383,22,0	1/1:40,0:40:30.09:365,30,0	1/1:36,0:35:47.43:284,47,0	1/1:23,0:22:11.05:129,11,0	1/1:18,0:18:41.90:398,42,0	1/1:13,0:13:8.69:302,9,0	1/1:27,0:27:30.75:352,31,0	1/1:25,0:25:15.32:226,15,0	0/1:24,0:24:40.10:165,0,40	1/1:25,0:25:0.08:200,0,0	1/1:18,0:18:5.18:247,5,0	1/1:30,0:30:52.45:425,52,0	1/1:30,0:30:75.12:740,75,0	1/1:17,0:17:24.03:183,24,0	1/1:6,0:6:14.31:65,14,0
chr10	18579356	.	G	GC	2242.13	PASS	AB=0.821;AC=38;AF=0.679;AN=56;BaseQRankSum=2.161;DP=431;FS=29.621;HRun=10;HaplotypeScore=76.0806;InbreedingCoeff=0.3969;MQ=72.77;MQ0=0;MQRankSum=-2.780;QD=7.40;ReadPosRankSum=2.130;VQSLOD=0.1837;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:34:25.72:0,26,222	1/1:6,0:5:6:51,6,0	0/0:19,0:19:8.67:0,9,183	0/1:12,0:11:8.12:8,0,53	1/1:16,0:16:25.97:143,26,0	1/1:7,1:8:2.39:31,2,0	0/1:15,9:24:5.84:316,0,6	0/0:16,0:17:3.36:0,3,28	0/1:10,0:10:6.85:7,0,103	1/1:14,0:14:17.39:99,17,0	1/1:15,0:15:17.42:100,17,0	1/1:3,11:14:3.48:33,3,0	1/1:18,0:18:43.62:264,44,0	1/1:19,0:19:7.23:130,7,0	0/1:3,4:7:23:23,0,40	1/1:3,3:6:3.01:32,3,0	1/1:25,0:26:66.04:358,66,0	0/1:2,7:9:31.21:110,0,31	0/0:15,0:17:25.84:0,26,185	0/0:13,0:13:14.92:0,15,123	0/0:27,0:28:38.82:0,39,311	0/1:13,0:13:10.68:11,0,40	1/1:16,0:16:16.81:91,17,0	1/1:19,0:19:34.34:176,34,0	1/1:7,3:10:5.25:83,5,0	1/1:17,0:17:32.36:192,32,0	1/1:14,0:14:20.30:124,20,0	1/1:10,0:10:8.52:42,9,0
chr10	18579366	.	C	CCG	2223.11	PASS	AB=0.819;AC=26;AF=0.464;AN=56;BaseQRankSum=-1.412;DP=459;FS=57.783;HRun=0;HaplotypeScore=89.2316;InbreedingCoeff=0.4625;MQ=76.63;MQ0=0;MQRankSum=-2.927;QD=7.97;ReadPosRankSum=1.435;VQSLOD=0.9708;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:50.37:0,50,505	1/1:1,0:5:3.88:27,4,0	0/0:20,0:20:43.11:0,43,494	0/0:18,0:16:29.42:0,29,321	1/1:0,1:18:11.48:239,11,0	0/1:5,0:5:1.33:1,0,11	0/1:23,0:24:9.65:10,0,188	0/0:15,0:16:14.56:0,15,131	0/1:10,0:10:0.82:1,0,219	0/1:0,0:15:2.07:96,0,2	0/1:1,0:16:9.72:62,0,10	0/0:15,0:15:2.51:0,3,7	1/1:2,0:25:7.64:236,8,0	0/1:3,0:25:27.19:190,0,27	0/0:8,0:8:11.02:0,11,109	0/0:6,0:6:10.95:0,11,67	1/1:3,0:31:21.54:507,22,0	0/0:11,0:11:8.48:0,8,114	0/0:21,0:21:39.76:0,40,434	0/0:12,0:12:23.96:0,24,273	0/0:26,0:26:50.63:0,51,596	0/1:12,0:12:1.70:2,0,129	1/1:0,1:18:12.47:174,12,0	1/1:0,0:17:19.64:327,20,0	0/1:7,0:7:12.57:13,0,39	1/1:1,0:21:15.78:243,16,0	1/1:0,0:22:13.13:180,13,0	1/1:1,0:8:9.03:103,9,0
chr10	18580865	.	T	TCAGAGCAGTGGCCA	1179.29	PASS	AB=0.833;AC=21;AF=0.955;AN=22;BaseQRankSum=-1.853;DP=43;FS=10.300;HRun=0;HaplotypeScore=23.6133;InbreedingCoeff=-0.1715;MQ=123.20;MQ0=0;MQRankSum=-1.152;QD=42.12;ReadPosRankSum=-1.252;VQSLOD=0.6511;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	1/1:0,0:4:12.04:492,12,0	0/1:4,1:5:48.35:239,0,48	./.	./.	1/1:2,0:2:2.99:24,3,0	1/1:4,0:4:12.02:163,12,0	./.	1/1:3,0:2:9.01:109,9,0	1/1:1,0:1:3:25,3,0	./.	./.	./.	./.	1/1:2,0:2:3.01:50,3,0	./.	./.	./.	1/1:1,0:1:2.97:20,3,0	1/1:2,0:2:3.01:39,3,0	./.	./.	./.	./.	1/1:1,0:1:3:26,3,0	./.	1/1:3,0:3:8.98:73,9,0
chr10	18592052	.	GA	G	3732.14	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=6.524;DP=370;FS=5.624;HRun=7;HaplotypeScore=61.6110;InbreedingCoeff=0.9463;MQ=86.88;MQ0=0;MQRankSum=-2.264;QD=24.08;ReadPosRankSum=2.137;VQSLOD=4.0400;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:21.02:0,21,246	0/0:6,0:6:18.06:0,18,226	0/0:21,0:17:42:0,42,454	0/0:17,0:15:2:0,2,257	0/0:17,0:17:45.03:0,45,503	1/1:1,12:13:30.06:305,30,0	1/1:1,12:13:30.06:305,30,0	1/1:7,14:21:54.08:531,54,0	0/0:8,0:8:23.99:0,24,266	0/0:18,0:18:51.13:0,51,613	0/0:16,0:16:39.08:0,39,468	1/1:2,11:13:24.05:244,24,0	0/0:9,0:9:24.08:0,24,302	0/0:13,0:13:33.05:0,33,384	1/1:1,13:14:36.08:366,36,0	1/1:2,17:19:41.82:427,42,0	0/0:13,0:13:36.11:0,36,451	1/1:1,7:8:15.03:153,15,0	1/1:1,14:15:42.10:428,42,0	1/1:2,11:13:30.06:305,30,0	1/1:0,4:4:12.03:122,12,0	1/1:3,6:9:21.03:209,21,0	0/0:18,0:18:45.91:0,46,515	0/0:7,0:7:18.04:0,18,213	1/1:1,12:13:33.07:336,33,0	0/0:15,0:15:38.98:0,39,455	0/0:21,0:21:51.16:0,51,639	0/0:4,0:4:6.02:0,6,75
chr10	18593351	.	C	CAT	1885.21	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-0.842;DP=807;FS=2.137;HRun=0;HaplotypeScore=121.8938;InbreedingCoeff=0.9843;MQ=84.69;MQ0=0;MQRankSum=-4.744;QD=45.98;ReadPosRankSum=3.118;VQSLOD=4.9666;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,40:41:99:1980,108,0	0/0:12,0:12:36.12:0,36,513	0/0:27,0:27:75.24:0,75,1043	0/0:33,0:33:86.40:0,86,1121	0/0:19,0:19:57.19:0,57,811	0/0:26,0:26:75.25:0,75,1073	0/0:35,0:35:99:0,99,1396	0/0:34,0:34:99:0,102,1431	0/0:41,0:41:99:0,120,1715	0/0:26,0:26:78.24:0,78,1077	0/0:25,0:25:66.22:0,66,946	0/0:29,0:29:78.26:0,78,1116	0/0:32,0:32:96.32:0,96,1374	0/0:43,0:43:99:0,117,1657	0/0:48,0:48:99:0,132,1872	0/0:36,0:36:99:0,102,1440	0/0:35,0:35:99:0,102,1398	0/0:22,0:22:63.18:0,63,876	0/0:22,0:22:63.18:0,63,876	0/0:18,0:18:48.16:0,48,686	0/0:33,0:33:96.32:0,96,1374	0/0:28,0:28:69.23:0,69,985	0/0:24,0:24:66.22:0,66,944	0/0:39,0:39:99:0,111,1584	0/0:22,0:22:66.22:0,66,943	0/0:33,0:33:99:0,99,1385	0/0:19,0:19:51.15:0,51,711	0/0:5,0:5:15.03:0,15,195
chr10	18593785	.	A	AT	7239.17	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-16.318;DP=604;FS=14.332;HRun=8;HaplotypeScore=55.4800;InbreedingCoeff=0.9994;MQ=80.64;MQ0=0;MQRankSum=-1.223;QD=27.32;ReadPosRankSum=-2.488;VQSLOD=3.3095;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:56:99:0,147,1321	0/0:12,0:12:33.02:0,33,302	0/0:12,0:12:28.78:0,29,237	0/0:19,0:18:32.71:0,33,253	0/0:22,0:22:60:0,60,542	1/1:0,21:21:54.16:623,54,0	1/1:2,16:19:41.96:465,42,0	1/1:9,34:43:99:1134,102,0	0/0:26,0:26:78.01:0,78,706	0/0:16,0:16:36.01:0,36,329	0/0:12,0:12:36.02:0,36,329	1/1:3,8:11:24.07:277,24,0	0/0:17,0:17:42:0,42,379	0/0:14,0:14:33.01:0,33,302	1/1:4,18:22:51.15:589,51,0	1/1:2,16:18:48.14:554,48,0	0/0:21,0:21:59.96:0,60,536	1/1:2,20:22:57.17:658,57,0	1/1:4,20:24:60.17:684,60,0	1/1:0,24:24:67.04:749,67,0	1/1:5,16:21:42.12:483,42,0	1/1:2,16:18:42.08:470,42,0	0/0:18,0:18:45.01:0,45,408	0/0:34,0:34:70.18:0,70,776	1/1:3,19:22:48.14:554,48,0	0/0:26,0:26:66.03:0,66,601	0/0:20,0:19:48.02:0,48,439	0/0:14,0:14:39.01:0,39,355
chr10	18594530	.	G	GTA	976.38	PASS	AB=0.813;AC=38;AF=0.950;AN=40;BaseQRankSum=-2.057;DP=57;FS=11.779;HRun=0;HaplotypeScore=16.7024;InbreedingCoeff=-0.2111;MQ=123.66;MQ0=0;MQRankSum=-1.786;QD=19.53;ReadPosRankSum=0.217;VQSLOD=1.7115;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/1:4,0:6:17.66:59,0,18	0/1:6,0:7:16.91:41,0,17	./.	./.	1/1:5,0:5:9.01:121,9,0	1/1:2,0:2:6.02:107,6,0	./.	1/1:1,0:1:3.01:51,3,0	1/1:2,0:2:3.01:51,3,0	1/1:2,0:2:3.01:49,3,0	1/1:1,0:1:2.97:20,3,0	1/1:3,0:3:3.01:48,3,0	1/1:1,1:2:3:25,3,0	1/1:2,0:2:5.98:69,6,0	./.	./.	1/1:1,0:1:3:27,3,0	./.	1/1:3,0:3:6:72,6,0	1/1:0,0:1:2.96:19,3,0	1/1:2,0:2:3:25,3,0	1/1:2,0:2:3.01:50,3,0	1/1:2,0:2:3.01:48,3,0	1/1:2,0:2:4.83:52,5,0	1/1:2,1:3:6.02:98,6,0	1/1:1,0:1:3.01:37,3,0
chr10	18595916	.	TGC	T	284.48	PASS	AB=0.838;AC=13;AF=0.295;AN=44;BaseQRankSum=-0.334;DP=386;FS=0.000;HRun=0;HaplotypeScore=118.3258;InbreedingCoeff=0.6167;MQ=28.30;MQ0=15;MQRankSum=-2.485;QD=3.23;ReadPosRankSum=-2.658;VQSLOD=1.4970;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:20:3.28:0,3,54	0/0:8,0:8:2.95:0,3,49	0/0:35,0:5:18.06:0,18,262	0/0:26,0:5:5.17:0,5,167	0/1:25,0:23:0.01:2,0,0	./.	./.	1/1:5,5:9:14.22:211,14,0	0/0:24,0:24:31.66:0,32,746	0/0:20,0:18:47.16:0,47,606	1/1:7,0:7:0.47:2,0,0	1/1:3,1:4:2.97:20,3,0	0/0:16,0:16:19.70:0,20,225	0/0:32,0:32:12.41:0,12,206	./.	0/1:6,2:7:0:0,0,0	0/0:15,0:15:30.75:0,31,331	1/1:4,3:7:10.77:111,11,0	1/1:7,0:6:8.94:65,9,0	./.	0/1:12,8:19:0.28:0,0,0	0/0:2,4:6:0:0,0,0	./.	0/0:24,0:24:2.03:0,2,7	./.	0/0:21,0:19:42.89:0,43,590	0/0:8,0:8:11.07:0,11,144	0/0:9,0:9:21.02:0,21,329
chr10	18595922	.	T	TGTGC	2281.55	PASS	AB=0.957;AC=34;AF=0.607;AN=56;BaseQRankSum=4.617;DP=430;FS=25.948;HRun=0;HaplotypeScore=197.1014;InbreedingCoeff=0.5835;MQ=28.87;MQ0=15;MQRankSum=-3.030;QD=7.36;ReadPosRankSum=0.796;VQSLOD=1.4666;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:25:0.48:1,0,0	0/1:6,1:7:0:0,0,0	0/0:31,0:5:11.94:0,12,147	0/0:31,0:7:19.90:0,20,218	0/1:21,4:23:0.02:0,0,0	1/1:5,0:5:9.03:103,9,0	1/1:11,0:11:9.43:98,9,0	0/0:8,0:7:16.96:0,17,90	0/0:25,0:25:51.21:0,51,861	1/1:18,1:17:25.47:284,25,0	0/1:8,1:9:0:0,0,0	1/1:12,0:12:12.77:106,13,0	1/1:12,4:16:11.43:192,11,0	1/1:30,4:34:12.31:191,12,0	0/1:6,0:6:0:0,0,0	1/1:12,0:11:15.03:157,15,0	1/1:13,2:15:20.64:245,21,0	0/0:7,0:7:11.87:0,12,84	0/1:8,0:7:7.08:23,0,7	1/1:6,0:6:8.30:67,8,0	0/0:18,0:17:0.94:0,1,4	0/1:8,0:8:0.14:0,0,0	0/1:8,0:8:0:0,0,0	0/1:27,1:29:0:1,0,0	0/1:11,0:11:4.52:58,0,5	1/1:19,2:20:26.38:487,26,0	1/1:10,1:11:10.58:122,11,0	1/1:8,1:9:20.70:302,21,0
chr10	18595926	.	CGTGCATGCATGTGTGTGT	C	458.55	PASS	AB=1.000;AC=15;AF=0.278;AN=54;BaseQRankSum=0.082;DP=433;FS=0.993;HRun=0;HaplotypeScore=198.5868;InbreedingCoeff=0.4524;MQ=29.23;MQ0=13;MQRankSum=-2.871;QD=5.04;ReadPosRankSum=-0.985;VQSLOD=2.5207;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:26:1.70:0,2,5	0/0:7,0:7:3.01:0,3,39	0/0:30,0:7:17.73:0,18,533	0/0:30,0:8:24.08:0,24,765	0/0:25,0:23:6.20:0,6,15	1/1:5,0:5:7.49:28,7,0	1/1:19,0:19:8.82:92,9,0	0/1:6,0:5:9.07:9,0,30	0/0:24,0:24:50.75:0,51,3737	0/0:21,0:19:49.56:0,50,1168	0/0:9,0:9:0.47:0,0,1	0/1:12,0:12:20.81:21,0,141	0/0:18,0:18:29.55:0,30,714	0/0:35,0:35:25.64:0,26,719	./.	1/1:12,0:11:8.34:38,8,0	0/0:14,0:14:25.46:0,25,859	0/1:6,0:6:3.91:134,0,4	1/1:2,5:7:18.61:263,19,0	0/1:6,0:6:10.62:11,0,43	0/0:16,0:15:0.23:0,0,1	0/1:8,0:8:0.03:0,0,0	0/0:7,0:7:0:0,0,0	0/0:30,0:30:4.39:0,4,28	1/1:10,0:10:3.94:17,4,0	0/0:21,0:19:50.58:0,51,1684	0/0:11,0:11:19.68:0,20,400	0/0:10,0:10:21.70:0,22,834
chr10	18595931	.	A	ATGCG	3205.87	PASS	AB=0.903;AC=35;AF=0.625;AN=56;BaseQRankSum=1.521;DP=463;FS=14.505;HRun=0;HaplotypeScore=198.6733;InbreedingCoeff=0.5381;MQ=30.22;MQ0=14;MQRankSum=-3.196;QD=10.05;ReadPosRankSum=4.098;VQSLOD=1.6786;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:26:0.43:1,0,0	1/1:7,1:8:2.90:20,3,0	0/0:34,0:8:15.05:0,15,236	0/0:32,0:11:29.35:0,29,375	0/1:21,3:22:0.02:0,0,0	1/1:5,0:5:7.79:30,8,0	0/1:18,0:18:9.75:10,0,50	0/0:6,0:5:5.68:0,6,29	0/0:26,0:26:54.55:0,55,973	1/1:18,3:18:47.36:606,47,0	0/0:9,0:9:1.98:0,2,7	1/1:14,0:13:10.56:61,11,0	1/1:15,3:18:14.50:245,15,0	1/1:34,4:38:23.08:371,23,0	0/0:9,0:9:4.44:0,4,14	1/1:14,0:13:7.78:43,8,0	1/1:13,3:16:27.53:507,28,0	0/1:6,0:7:7.99:8,0,57	1/1:7,0:7:6.01:26,6,0	0/1:6,0:6:2.43:13,0,2	0/0:17,0:17:2.92:0,3,9	0/0:9,0:9:8.85:0,9,28	0/1:6,3:9:0:0,0,0	1/1:28,5:34:6.41:42,6,0	1/1:10,0:10:3.71:18,4,0	1/1:19,2:20:53.76:788,54,0	1/1:12,0:12:16:233,16,0	1/1:9,0:9:19.04:355,19,0
chr10	18595933	.	GCA	G	32.93	PASS	AB=0.992;AC=11;AF=0.204;AN=54;BaseQRankSum=-0.122;DP=472;FS=20.022;HRun=0;HaplotypeScore=156.3969;InbreedingCoeff=0.3227;MQ=30.67;MQ0=16;MQRankSum=0.057;QD=0.32;ReadPosRankSum=-1.503;VQSLOD=0.9589;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:25:0.64:0,1,2	0/0:8,0:8:2.18:0,2,8	0/0:35,0:10:27.08:0,27,378	0/0:35,0:12:35.37:0,35,461	0/0:24,0:22:3.77:0,4,8	0/0:4,0:4:3.38:0,3,8	0/0:19,0:19:5.25:0,5,15	0/0:3,0:2:5.81:0,6,31	0/0:27,0:26:53.06:0,53,983	0/0:21,0:18:21.24:0,21,225	0/1:10,0:10:0:0,0,0	0/1:14,0:13:9.41:63,0,9	0/0:18,0:18:18.14:0,18,148	0/0:39,0:39:26.06:0,26,171	./.	0/0:13,0:12:7.55:0,8,19	0/1:16,1:17:0.43:0,0,192	0/1:7,0:7:3.82:4,0,29	1/1:7,0:7:5.59:49,6,0	1/1:6,0:6:0.59:17,1,0	0/0:17,1:17:1.10:0,1,3	0/1:11,0:11:0.26:0,0,0	0/1:9,0:9:0:0,0,0	0/0:36,1:37:13.45:0,13,59	0/0:11,0:11:2.05:0,2,5	0/1:23,0:22:0.38:0,0,291	0/0:11,0:11:20.77:0,21,150	0/0:8,1:9:19.57:0,20,181
chr10	18595934	.	C	CGTGCGT	1033.74	PASS	AB=0.958;AC=18;AF=0.321;AN=56;BaseQRankSum=2.299;DP=470;FS=2.894;HRun=0;HaplotypeScore=207.4304;InbreedingCoeff=0.3727;MQ=32.89;MQ0=16;MQRankSum=-4.156;QD=5.12;ReadPosRankSum=4.715;VQSLOD=1.9954;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:25:0.40:0,0,0	0/0:8,0:8:1.94:0,2,6	0/0:35,0:9:26.37:0,26,388	0/0:35,0:13:34.54:0,35,600	0/1:24,0:22:0.24:0,0,0	0/0:4,0:4:3.24:0,3,7	0/0:19,0:19:15.54:0,16,103	0/0:3,0:2:5.68:0,6,29	0/0:28,0:27:55.49:0,55,1284	1/1:19,0:16:9.32:223,9,0	0/1:5,2:10:0:0,0,0	0/1:14,0:13:13.62:41,0,14	1/1:17,0:18:5.98:100,6,0	0/1:37,0:37:19.73:119,0,20	0/0:10,0:10:5.49:0,5,25	0/0:13,0:12:7.53:0,8,24	0/1:15,0:15:44.19:146,0,44	0/0:7,0:7:11.87:0,12,139	0/1:7,0:7:2.78:7,0,3	0/1:6,0:6:6.70:15,0,7	0/0:19,0:18:3.64:0,4,10	0/0:11,0:11:10.71:0,11,49	0/1:9,0:9:0.13:0,0,0	0/0:36,0:37:14.95:0,15,99	0/0:11,0:11:3.75:0,4,10	1/1:24,0:23:17.07:338,17,0	1/1:10,1:11:3.36:62,3,0	1/1:8,0:8:18.06:136,18,0
chr10	18595936	.	T	TGC	1581.74	PASS	AB=0.933;AC=34;AF=0.630;AN=54;BaseQRankSum=7.089;DP=487;FS=21.237;HRun=0;HaplotypeScore=175.2745;InbreedingCoeff=0.3355;MQ=34.14;MQ0=16;MQRankSum=-4.746;QD=5.20;ReadPosRankSum=3.597;VQSLOD=1.8316;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:26:2.19:0,2,23	0/0:7,1:8:5.95:0,6,47	0/0:34,0:9:26.89:0,27,303	0/0:37,0:13:23.67:0,24,379	0/1:23,2:23:0:0,0,0	1/1:6,0:6:11.81:78,12,0	1/1:19,0:19:17.29:117,17,0	1/1:6,0:5:14.76:133,15,0	0/0:30,0:29:61.72:0,62,799	1/1:17,2:16:13.34:253,13,0	0/1:11,0:11:0:0,0,0	1/1:13,0:13:20.13:147,20,0	0/1:20,1:21:40.45:62,0,40	0/1:33,4:38:34.21:122,0,34	./.	1/1:14,0:13:14.67:88,15,0	0/1:20,0:20:88.88:89,0,101	1/1:5,0:5:4.50:16,4,0	1/1:7,0:7:14.70:122,15,0	1/1:8,0:8:1.97:19,2,0	1/1:16,0:15:2.52:24,3,0	1/1:11,0:11:2.75:26,3,0	0/1:7,2:9:0.08:0,0,0	0/0:33,1:34:17.89:0,18,151	1/1:10,0:10:6.34:36,6,0	0/1:24,1:24:66.68:276,0,67	0/1:11,1:12:32.41:32,0,42	1/1:8,0:8:5.92:106,6,0
chr10	18595937	.	G	GCA	912.41	PASS	AB=0.970;AC=24;AF=0.444;AN=54;BaseQRankSum=7.239;DP=486;FS=33.691;HRun=0;HaplotypeScore=163.6651;InbreedingCoeff=0.0326;MQ=34.46;MQ0=17;MQRankSum=-5.441;QD=3.77;ReadPosRankSum=3.995;VQSLOD=1.3000;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:25:5.20:0,5,55	0/0:7,0:7:6.02:0,6,83	0/0:34,0:9:27.02:0,27,374	0/0:39,0:14:18.28:0,18,407	0/0:23,1:22:0.46:0,0,19	1/1:6,0:6:6.17:16,6,0	0/1:20,0:20:27.78:28,0,28	1/1:6,0:5:9.76:48,10,0	0/0:30,0:29:61.37:0,61,923	0/1:19,0:16:41.55:150,0,42	0/0:12,0:12:2.83:0,3,20	1/1:16,0:15:4.39:37,4,0	0/1:20,0:20:93.71:97,0,94	0/1:36,0:36:89.12:126,0,89	./.	1/1:14,0:13:8.51:24,9,0	0/1:19,0:19:74.88:75,0,214	0/1:6,0:6:4.32:4,0,29	1/1:7,0:7:1.72:33,2,0	0/0:8,0:8:2.83:0,3,25	0/0:17,0:16:0.22:0,0,20	1/1:12,0:12:1.44:5,1,0	0/1:8,0:8:0.08:0,0,0	0/0:34,0:34:17.98:0,18,266	1/1:10,0:10:3.68:10,4,0	0/1:23,0:22:99:237,0,207	0/1:13,0:13:31.99:32,0,93	0/1:4,3:7:18.45:143,0,18
chr10	18595938	.	T	TGC	833.96	PASS	AB=0.914;AC=18;AF=0.333;AN=54;BaseQRankSum=4.851;DP=494;FS=3.919;HRun=0;HaplotypeScore=164.9388;InbreedingCoeff=0.1983;MQ=36.59;MQ0=18;MQRankSum=-4.514;QD=4.99;ReadPosRankSum=4.021;VQSLOD=2.8609;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:25:4.64:0,5,23	0/0:7,0:7:5.98:0,6,65	0/0:34,0:9:26.93:0,27,339	0/0:39,0:14:35.56:0,36,440	0/0:24,0:22:2.88:0,3,23	1/1:4,3:7:3.74:96,4,0	0/1:16,5:21:3.92:134,0,4	0/1:6,0:5:0.36:35,0,0	0/0:31,0:30:61.89:0,62,786	0/0:19,0:16:0.53:0,1,167	0/0:12,0:12:2.85:0,3,24	0/1:7,9:15:0.42:245,0,0	0/1:20,0:20:0.64:1,0,126	0/0:36,0:36:2.57:0,3,132	./.	1/1:8,6:13:15.04:172,15,0	0/0:20,0:20:7.63:0,8,219	0/1:5,0:5:5.60:6,0,16	1/1:5,2:7:14.30:130,14,0	0/1:5,4:9:19.27:47,0,19	0/0:14,2:15:5.77:0,6,33	0/0:9,3:12:4.81:0,5,27	0/1:8,0:8:0.08:0,0,0	0/0:36,0:36:17.96:0,18,215	1/1:5,6:11:6.49:70,6,0	0/1:23,0:22:23.14:23,0,279	0/1:13,0:13:2.72:3,0,148	0/1:7,0:7:20.57:21,0,53
chr10	18595944	.	T	TGC	1856.40	PASS	AB=0.996;AC=29;AF=0.518;AN=56;BaseQRankSum=3.088;DP=553;FS=12.270;HRun=0;HaplotypeScore=170.8652;InbreedingCoeff=0.4258;MQ=38.62;MQ0=18;MQRankSum=-1.543;QD=6.19;ReadPosRankSum=-0.569;VQSLOD=2.3388;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:33:15.56:0,16,152	0/0:7,0:7:8.93:0,9,84	0/0:39,0:12:20.25:0,20,326	0/0:36,0:15:31.09:0,31,403	0/0:26,0:24:8.88:0,9,75	1/1:6,3:9:15.02:151,15,0	1/1:21,5:26:32.37:271,32,0	1/1:8,0:7:20.94:176,21,0	0/0:34,0:33:63.90:0,64,816	0/1:21,0:18:7.22:7,0,254	0/0:12,0:12:2.86:0,3,25	1/1:15,5:19:32.23:255,32,0	0/1:22,0:22:31.87:32,0,153	0/1:35,0:36:39.16:39,0,136	1/1:15,1:16:11.99:100,12,0	1/1:10,6:15:18.04:195,18,0	0/1:21,0:21:44.59:45,0,225	0/1:6,0:6:0.83:27,0,1	1/1:5,2:7:20.66:211,21,0	1/1:7,3:10:13.74:101,14,0	1/1:20,2:21:14.33:103,14,0	1/1:12,2:14:7.54:55,8,0	0/0:10,0:10:2.82:0,3,25	0/0:37,0:37:20.94:0,21,238	1/1:10,5:15:15.48:144,15,0	0/1:24,0:23:81.28:81,0,286	0/0:16,0:16:4.29:0,4,209	0/1:7,0:7:47.95:61,0,48
chr10	18596315	.	ACT	A	1231.97	PASS	AB=0.853;AC=10;AF=0.179;AN=56;BaseQRankSum=10.853;DP=1161;FS=14.174;HRun=0;HaplotypeScore=199.4008;InbreedingCoeff=-0.2063;MQ=52.42;MQ0=42;MQRankSum=-9.918;QD=3.24;ReadPosRankSum=-5.520;VQSLOD=-0.2061;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:81,0:73:99:0,186,3439	0/0:24,0:23:60.21:0,60,1122	0/0:36,0:6:15.05:0,15,234	0/0:31,0:8:21.07:0,21,373	0/0:31,0:30:75.22:0,75,1308	0/1:23,5:27:99:107,0,990	0/1:35,8:42:99:187,0,1598	0/0:30,3:23:66.20:0,66,1162	0/0:39,0:39:99:0,114,2028	0/0:54,0:53:99:0,147,2623	0/0:35,0:35:96.33:0,96,1794	0/1:40,9:49:99:257,0,1871	0/0:41,0:39:99:0,114,2130	0/0:52,0:52:99:0,154,2841	0/1:31,14:43:99:448,0,1309	0/1:40,3:43:11.38:11,0,1847	0/0:44,0:43:99:0,117,2179	0/1:22,9:28:99:101,0,1073	0/1:20,3:16:1.91:2,0,688	0/1:27,6:32:99:129,0,1273	0/0:64,7:66:46.77:0,47,2779	0/1:38,5:42:63.89:64,0,1695	0/0:40,0:39:99:0,102,1807	0/0:52,0:47:99:0,123,2263	0/1:37,5:41:67.14:67,0,1573	0/0:46,0:43:99:0,129,2334	0/0:43,0:42:99:0,123,2227	0/0:27,0:25:72.19:0,72,1248
chr10	18596399	.	ACT	A	9386.70	PASS	AB=0.592;AC=20;AF=0.357;AN=56;BaseQRankSum=6.252;DP=712;FS=1.051;HRun=0;HaplotypeScore=129.3644;InbreedingCoeff=0.6376;MQ=48.39;MQ0=48;MQRankSum=0.644;QD=30.28;ReadPosRankSum=-1.288;VQSLOD=6.3434;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:33:51.17:0,51,952	0/0:5,0:5:15.05:0,15,278	0/0:35,0:3:6.02:0,6,88	0/0:31,0:5:15.05:0,15,280	0/0:11,0:11:33.11:0,33,616	1/1:3,12:11:27.09:397,27,0	1/1:1,32:32:90.30:1323,90,0	0/1:7,24:24:46.07:817,0,46	0/0:41,0:41:99:0,123,2238	0/0:35,0:32:51.16:0,51,907	0/0:15,0:14:39.13:0,39,726	0/1:8,26:34:66.27:976,0,66	0/0:26,0:25:60.14:0,60,1079	0/0:29,0:25:56.67:0,57,978	0/1:14,24:36:13.45:948,0,13	1/1:4,18:22:1.39:716,1,0	0/0:20,0:18:48.16:0,48,889	0/1:8,12:17:99:520,0,103	1/1:2,13:8:24.08:352,24,0	1/1:2,14:15:39.13:567,39,0	1/1:8,47:48:99:1587,108,0	1/1:1,16:16:45.15:655,45,0	0/0:18,0:17:26.92:0,27,498	0/0:29,0:26:59.37:0,59,1036	1/1:2,12:13:36.12:528,36,0	0/0:28,0:27:81.28:0,81,1498	0/0:20,0:20:57.11:0,57,1027	0/0:18,0:16:45.15:0,45,842
chr10	18597558	.	TC	T	8803.26	PASS	AB=0.842;AC=53;AF=0.946;AN=56;BaseQRankSum=3.223;DP=602;FS=7.956;HRun=1;HaplotypeScore=178.2954;InbreedingCoeff=-0.0528;MQ=67.89;MQ0=0;MQRankSum=-1.462;QD=14.62;ReadPosRankSum=6.755;VQSLOD=4.3481;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:28:59.06:433,59,0	1/1:6,0:6:12.87:96,13,0	0/1:6,0:6:7.98:32,0,8	0/1:7,0:7:13.65:35,0,14	1/1:15,0:15:43.95:275,44,0	1/1:15,0:15:42.42:243,42,0	1/1:40,0:40:99:612,110,0	1/1:24,0:24:55.88:300,56,0	0/1:3,29:32:29.48:29,0,41	1/1:16,0:16:45.65:235,46,0	1/1:0,18:18:38.90:326,39,0	1/1:30,0:30:84.85:527,85,0	1/1:14,0:14:37.93:217,38,0	1/1:31,0:31:60.88:462,61,0	1/1:24,0:24:42.17:347,42,0	1/1:27,0:27:78.63:450,79,0	1/1:44,0:44:99:673,119,0	1/1:27,0:27:46.88:350,47,0	1/1:31,0:31:84.15:495,84,0	1/1:13,0:13:35.27:243,35,0	1/1:21,0:21:32.39:280,32,0	1/1:18,0:18:49.35:293,49,0	1/1:17,0:17:49.44:278,49,0	1/1:26,0:26:44.16:336,44,0	1/1:15,0:15:20.79:207,21,0	1/1:15,0:15:43.73:285,44,0	1/1:26,0:26:70.37:439,70,0	1/1:16,0:16:47.01:303,47,0
chr10	18599322	.	AG	A	10381.32	PASS	AB=0.895;AC=51;AF=0.911;AN=56;BaseQRankSum=0.058;DP=703;FS=8.771;HRun=10;HaplotypeScore=91.6597;InbreedingCoeff=0.7646;MQ=77.93;MQ0=0;MQRankSum=-2.357;QD=15.61;ReadPosRankSum=3.671;VQSLOD=4.8232;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,0:44:77.40:228,77,0	1/1:2,10:13:28.99:234,29,0	0/1:15,1:17:19.87:20,0,184	0/0:14,0:15:13.36:0,13,80	1/1:3,24:27:59.96:521,60,0	1/1:3,17:20:44.98:391,45,0	1/1:3,30:33:86.98:755,87,0	1/1:4,0:29:40.05:116,40,0	0/0:22,0:22:44.96:0,45,481	1/1:6,24:30:68.31:572,68,0	1/1:5,14:19:32.94:279,33,0	1/1:6,25:31:71.98:625,72,0	1/1:3,22:25:59.96:520,60,0	1/1:2,23:25:65.98:572,66,0	1/1:4,29:33:47.79:644,48,0	1/1:2,29:31:83.98:729,84,0	1/1:3,27:30:74.95:646,75,0	1/1:0,20:20:47.99:417,48,0	1/1:2,0:25:39.99:117,40,0	1/1:4,0:28:38.69:114,39,0	1/1:5,0:36:57.03:168,57,0	1/1:5,17:22:14.80:357,15,0	1/1:4,17:21:47.94:417,48,0	1/1:5,19:24:53.94:464,54,0	1/1:7,17:24:23.76:429,24,0	1/1:3,16:19:44.44:369,44,0	1/1:3,17:20:35.99:313,36,0	1/1:0,18:18:41.99:365,42,0
chr10	18600980	.	AG	A	15469.25	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=13.915;DP=666;FS=13.114;HRun=2;HaplotypeScore=68.1167;InbreedingCoeff=0.9995;MQ=82.32;MQ0=0;MQRankSum=-2.153;QD=36.74;ReadPosRankSum=2.002;VQSLOD=4.4520;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,38:39:99:1286,99,0	1/1:0,8:8:24.08:312,24,0	0/0:16,0:16:28.29:0,28,530	0/0:21,0:21:33.82:0,34,753	1/1:0,19:19:57.18:734,57,0	0/0:18,0:18:54.18:0,54,809	0/0:39,0:39:99:0,111,1664	1/1:0,27:27:75.23:959,75,0	0/0:27,0:27:81.27:0,81,1203	1/1:1,22:23:69.18:859,69,0	1/1:0,14:14:42.14:545,42,0	0/0:16,0:16:48.16:0,48,718	1/1:0,29:29:84.27:1091,84,0	1/1:0,38:38:99:1440,111,0	0/0:25,0:25:75.20:0,75,1079	0/0:20,0:20:60.20:0,60,899	1/1:0,29:29:84.27:1091,84,0	0/0:34,0:34:99:0,99,1457	1/1:0,21:21:63.19:804,63,0	1/1:0,13:13:36.12:467,36,0	1/1:1,58:59:99:2221,172,0	0/0:15,0:15:45.15:0,45,674	1/1:0,14:14:39.13:506,39,0	1/1:0,26:26:72.23:935,72,0	0/0:14,0:14:42.14:0,42,630	1/1:0,33:33:99:1285,99,0	1/1:1,14:15:36.12:467,36,0	1/1:0,14:14:36.12:467,36,0
chr10	18602621	.	AGTGTGTGTGTGTGTGTGTGTGT	A	8006.39	PASS	AB=0.792;AC=23;AF=0.411;AN=56;BaseQRankSum=4.501;DP=587;FS=22.798;HRun=0;HaplotypeScore=299.2512;InbreedingCoeff=0.7605;MQ=63.80;MQ0=15;MQRankSum=-6.105;QD=33.22;ReadPosRankSum=1.602;VQSLOD=2.2779;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:30:6.02:307,6,0	1/1:6,2:8:3.01:174,3,0	0/0:41,0:29:14.17:0,14,304	0/0:32,0:18:12.04:0,12,313	0/1:14,5:18:7.08:691,0,7	0/0:13,0:18:27.09:0,27,941	0/0:17,0:19:8.42:0,8,475	0/0:20,0:19:18.06:0,18,1425	0/0:21,0:29:29.47:0,29,2653	1/1:20,2:22:6.01:217,6,0	1/1:10,7:17:18.06:1042,18,0	0/0:18,0:28:33:0,33,776	1/1:8,5:13:6.07:328,6,0	1/1:21,12:33:21.06:1216,21,0	0/0:12,0:17:15.05:0,15,374	0/0:16,0:23:48.11:0,48,1398	1/1:19,4:23:9.02:501,9,0	0/0:19,0:19:39.13:0,39,1833	0/0:16,0:12:8.99:0,9,340	0/0:8,0:7:3.01:0,3,288	0/0:30,0:29:18.06:0,18,1466	0/0:9,0:11:15.05:0,15,594	0/0:10,4:14:0.47:0,0,1	1/1:16,9:27:18.06:985,18,0	0/0:14,0:18:27.09:0,27,942	1/1:13,10:24:30.09:1503,30,0	1/1:11,4:15:6.02:347,6,0	1/1:0,8:8:12.04:695,12,0
chr10	18602685	.	A	AGG	1758.81	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=10.805;DP=482;FS=13.655;HRun=0;HaplotypeScore=187.0537;InbreedingCoeff=0.9241;MQ=89.44;MQ0=0;MQRankSum=-8.103;QD=30.86;ReadPosRankSum=-0.913;VQSLOD=4.1372;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:87.25:0,87,1385	0/0:6,0:6:18.06:0,18,294	0/0:35,0:32:83.95:0,84,1257	0/0:42,0:38:99:0,108,1596	0/0:17,0:17:51.17:0,51,799	1/1:0,3:3:9.02:116,9,0	1/1:0,2:2:6.02:88,6,0	0/0:23,0:23:63.68:0,64,1008	0/0:16,0:16:36.11:0,36,564	0/0:16,0:16:48.16:0,48,782	0/0:13,0:13:39.13:0,39,636	1/1:0,10:10:30.09:420,30,0	0/0:21,0:21:54.10:0,54,848	0/0:36,0:36:93.31:0,93,1483	1/1:0,10:10:17.20:308,17,0	1/1:3,6:9:1.80:212,2,0	0/0:25,0:25:72.21:0,72,1146	1/1:0,5:5:13.86:197,14,0	0/0:17,0:15:45.12:0,45,680	0/0:9,0:8:24.08:0,24,392	0/0:16,0:16:42.14:0,42,685	1/1:0,8:8:16.98:262,17,0	0/0:17,0:17:48.15:0,48,756	0/0:29,0:29:72.24:0,72,1172	1/1:1,9:10:24.03:348,24,0	0/0:24,0:24:66.23:0,66,1076	0/0:19,0:19:51.14:0,51,801	0/0:9,0:9:15.05:0,15,245
chr10	18602687	.	A	AAAAGAGAAGACACAGG	10685.04	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=7.751;DP=486;FS=15.144;HRun=0;HaplotypeScore=266.4560;InbreedingCoeff=0.9644;MQ=90.12;MQ0=0;MQRankSum=-8.182;QD=190.80;ReadPosRankSum=2.352;VQSLOD=4.0887;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:84.29:0,84,3389	0/0:6,0:6:18.06:0,18,867	0/0:33,0:32:84.16:0,84,2852	0/0:40,0:38:99:0,105,3513	0/0:18,0:18:48.08:0,48,1939	1/1:0,3:3:9.03:608,9,0	1/1:0,2:2:6.02:415,6,0	0/0:22,0:22:66.23:0,66,2821	0/0:15,0:15:36.10:0,36,1400	0/0:18,0:18:48.16:0,48,2125	0/0:14,0:14:39.13:0,39,1629	1/1:0,10:10:30.10:2042,30,0	0/0:21,0:21:57.20:0,57,2441	0/0:38,0:38:96.32:0,96,3653	1/1:0,10:10:30.10:1881,30,0	1/1:2,5:8:24.08:1238,24,0	0/0:26,0:26:72.25:0,72,3019	1/1:0,5:5:15.05:1067,15,0	0/0:20,0:18:54.15:0,54,1777	0/0:9,0:8:24.08:0,24,1082	0/0:16,0:16:42.14:0,42,1808	1/1:0,8:8:24.08:1511,24,0	0/0:17,0:17:48.16:0,48,1964	0/0:29,0:29:78.27:0,78,3019	1/1:1,9:10:30.10:1923,30,0	0/0:24,0:24:69.24:0,69,3020	0/0:18,0:18:48.16:0,48,2134	0/0:9,0:9:15.05:0,15,685
chr10	18602689	.	TAA	T	998.89	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=10.917;DP=495;FS=19.375;HRun=2;HaplotypeScore=186.8102;InbreedingCoeff=0.9576;MQ=91.22;MQ0=0;MQRankSum=-8.164;QD=17.22;ReadPosRankSum=5.382;VQSLOD=-0.4444;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:96.33:0,96,1890	0/0:6,0:6:18.06:0,18,365	0/0:33,0:32:93.27:0,93,1739	0/0:36,0:36:94.97:0,95,1757	0/0:18,0:18:45.15:0,45,913	1/1:0,3:3:8.58:58,9,0	1/1:0,2:2:6:51,6,0	0/0:23,0:23:69.24:0,69,1402	0/0:14,0:14:36.11:0,36,695	0/0:21,0:21:63.21:0,63,1208	0/0:14,0:14:42.10:0,42,809	1/1:1,10:11:32.42:236,32,0	0/0:22,0:22:60.21:0,60,1216	0/0:38,0:38:99:0,100,2009	1/1:0,10:10:21.88:167,22,0	1/1:4,5:9:12.28:202,12,0	0/0:26,0:26:75.21:0,75,1431	1/1:0,5:5:15.03:156,15,0	0/0:21,0:20:60.21:0,60,1184	0/0:9,0:8:24.08:0,24,487	0/0:17,0:17:45.15:0,45,904	1/1:0,8:8:20.87:150,21,0	0/0:18,0:18:51.18:0,51,1034	0/0:30,0:30:78.26:0,78,1529	1/1:1,9:10:24.60:177,25,0	0/0:24,0:24:69.24:0,69,1380	0/0:18,0:18:48.16:0,48,971	0/0:9,0:9:15.05:0,15,304
chr10	18603398	.	CTCTCTT	C	6072.86	PASS	AB=1.000;AC=40;AF=0.714;AN=56;BaseQRankSum=-7.745;DP=568;FS=5.021;HRun=0;HaplotypeScore=146.1722;InbreedingCoeff=0.1010;MQ=67.44;MQ0=10;MQRankSum=-0.030;QD=12.55;ReadPosRankSum=-2.361;VQSLOD=3.7038;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:29:53.10:333,0,53	1/1:11,0:11:17.81:150,18,0	0/0:23,0:17:10.98:0,11,322	0/0:32,0:15:28.19:0,28,295	0/1:24,0:24:57.75:269,0,58	1/1:23,0:23:56.91:479,57,0	1/1:5,16:21:5.55:106,6,0	1/1:11,0:11:26.89:231,27,0	0/0:29,0:29:80.99:0,81,1238	0/1:18,0:17:99:120,0,196	1/1:13,0:12:2.54:108,3,0	1/1:34,0:34:66.77:612,67,0	0/1:16,0:16:81.06:81,0,175	0/1:21,0:20:1.58:149,0,2	1/1:30,0:30:59.53:478,60,0	1/1:27,0:27:44.47:417,44,0	0/1:20,0:19:99:218,0,118	1/1:27,0:25:46.11:407,46,0	0/1:12,0:11:7.88:208,0,8	1/1:13,0:13:17.15:211,17,0	1/1:13,0:12:23.95:194,24,0	1/1:15,0:15:29.96:249,30,0	1/1:20,0:19:32.96:273,33,0	1/1:18,0:17:6.68:113,7,0	1/1:5,0:5:15:170,15,0	0/1:22,0:22:99:163,0,362	0/1:20,0:20:99:148,0,224	0/1:20,0:18:99:187,0,118
chr10	18603503	.	T	TG	14991.29	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-14.984;DP=726;FS=0.277;HRun=2;HaplotypeScore=70.4404;InbreedingCoeff=1.0000;MQ=84.53;MQ0=0;MQRankSum=-2.351;QD=44.75;ReadPosRankSum=-0.352;VQSLOD=4.1003;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:96.32:0,96,1338	0/0:17,0:17:51.17:0,51,710	0/0:23,0:23:69.22:0,69,934	0/0:21,0:21:50.23:0,50,819	0/0:20,0:20:57.19:0,57,797	1/1:1,25:26:66.23:1054,66,0	1/1:0,20:20:57.19:909,57,0	1/1:2,26:28:78.20:1171,78,0	0/0:31,0:31:90.30:0,90,1258	0/0:26,0:26:78.24:0,78,1055	0/0:13,0:13:39.13:0,39,545	1/1:1,35:36:96.11:1531,96,0	0/0:34,0:34:99:0,102,1424	0/0:33,0:33:96.32:0,96,1340	1/1:0,26:26:75.26:1198,75,0	1/1:0,36:35:99:1631,102,0	0/0:42,0:42:99:0,120,1646	1/1:0,21:21:60.20:958,60,0	1/1:1,19:20:60.16:931,60,0	1/1:0,30:30:84.29:1342,84,0	1/1:0,33:33:96.33:1535,96,0	1/1:0,29:29:87.30:1388,87,0	0/0:20,0:20:60.20:0,60,839	0/0:19,0:19:51.16:0,51,697	1/1:1,29:30:84.29:1343,84,0	0/0:20,0:20:57.19:0,57,795	0/0:28,0:28:84.28:0,84,1175	0/0:11,0:11:33.11:0,33,462
chr10	18606071	.	AT	A	14713.54	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=6.810;DP=596;FS=17.340;HRun=6;HaplotypeScore=108.8239;InbreedingCoeff=0.9716;MQ=91.16;MQ0=0;MQRankSum=-9.214;QD=27.71;ReadPosRankSum=4.052;VQSLOD=3.3151;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,21:22:57.14:613,57,0	1/1:1,5:6:15.04:161,15,0	0/0:33,0:33:81.17:0,81,1014	0/0:14,0:14:38.61:0,39,460	1/1:4,26:30:69.17:742,69,0	1/1:2,16:18:45.11:483,45,0	1/1:1,17:18:39.10:419,39,0	1/1:4,31:35:87.22:935,87,0	0/0:18,0:18:54.18:0,54,709	1/1:2,28:30:84.21:901,84,0	1/1:3,16:19:48.12:516,48,0	1/1:0,13:13:39.10:419,39,0	1/1:3,19:22:54.13:580,54,0	1/1:1,18:19:48.12:516,48,0	1/1:0,32:32:90.23:967,90,0	1/1:1,15:16:8.64:444,9,0	1/1:1,32:33:87.22:935,87,0	1/1:0,20:20:51.13:548,51,0	1/1:5,14:19:42.10:451,42,0	1/1:1,27:28:69.17:742,69,0	1/1:0,11:11:27.07:290,27,0	1/1:1,24:25:66.16:709,66,0	1/1:1,13:14:32.94:354,33,0	1/1:0,11:11:27.07:290,27,0	1/1:0,27:27:78.19:838,78,0	1/1:2,22:24:63.13:667,63,0	1/1:1,26:27:75.19:806,75,0	1/1:0,12:12:36.09:387,36,0
chr10	18607055	.	AGGGGGGGG	A	3675.39	PASS	AB=0.911;AC=36;AF=0.643;AN=56;BaseQRankSum=-1.140;DP=514;FS=9.457;HRun=10;HaplotypeScore=184.1545;InbreedingCoeff=0.1152;MQ=60.98;MQ0=5;MQRankSum=-4.382;QD=9.10;ReadPosRankSum=-0.534;VQSLOD=0.0471;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,1:25:2.90:0,3,11	0/1:5,1:6:22.94:40,0,23	0/0:28,0:21:27.56:0,28,1334	0/0:30,0:20:49.03:0,49,1244	1/1:16,1:16:5.40:49,5,0	0/1:15,1:16:23.78:180,0,24	1/1:17,1:18:0.15:119,0,0	1/1:16,3:17:9.10:236,9,0	0/0:17,0:18:47.83:0,48,1750	0/1:11,2:13:17.40:193,0,17	0/1:11,0:11:0:0,0,0	1/1:25,2:27:2.40:33,2,0	1/1:16,2:18:26.13:422,26,0	1/1:15,1:16:14.78:205,15,0	0/1:29,0:29:4.62:146,0,5	1/1:18,1:19:7.63:129,8,0	1/1:23,2:26:16.44:268,16,0	0/1:17,1:18:46.75:287,0,47	0/1:16,3:17:1.28:450,0,1	1/1:22,0:21:4.06:62,4,0	1/1:6,2:8:0.94:2,1,0	1/1:13,0:13:6.90:144,7,0	1/1:14,0:13:1.37:5,1,0	1/1:18,2:19:3.48:81,3,0	0/1:15,1:16:0.99:84,0,1	0/1:16,4:20:99:237,0,120	0/1:16,2:19:45.78:304,0,46	0/0:5,0:6:1.25:0,1,3
chr10	18608315	.	CA	C	8166.35	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=11.965;DP=750;FS=6.147;HRun=1;HaplotypeScore=75.1592;InbreedingCoeff=0.9906;MQ=83.17;MQ0=0;MQRankSum=-7.568;QD=38.52;ReadPosRankSum=2.838;VQSLOD=5.5941;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,129,2037	0/0:19,0:19:57.19:0,57,891	0/0:21,0:20:57.15:0,57,881	0/0:28,1:28:65.54:0,66,1053	0/0:26,0:26:78.25:0,78,1215	1/1:0,20:20:57.19:797,57,0	1/1:0,38:38:99:1468,105,0	0/0:27,0:27:81.27:0,81,1276	0/0:30,0:30:90.31:0,90,1439	0/0:22,0:22:63.20:0,63,984	0/0:15,0:15:45.15:0,45,719	1/1:0,25:25:66.22:922,66,0	0/0:33,0:33:99:0,99,1550	0/0:27,0:27:81.28:0,81,1294	1/1:0,32:32:84.28:1173,84,0	1/1:0,32:32:93.31:1301,93,0	0/0:19,0:19:57.17:0,57,884	1/1:1,18:19:9.21:703,9,0	0/0:25,0:25:75.22:0,75,1152	0/0:24,0:24:66.21:0,66,1030	0/0:59,0:59:99:0,175,2777	1/1:0,17:17:45.15:628,45,0	0/0:22,0:22:66.21:0,66,1029	0/0:33,0:33:99:0,99,1582	1/1:0,29:29:84.28:1175,84,0	0/0:27,0:27:81.26:0,81,1272	0/0:25,0:24:75.24:0,75,1165	0/0:12,0:12:36.12:0,36,576
chr10	18608824	.	CGTTT	C	11622.39	PASS	AB=0.800;AC=47;AF=0.870;AN=54;BaseQRankSum=5.692;DP=726;FS=0.766;HRun=0;HaplotypeScore=157.7345;InbreedingCoeff=0.7276;MQ=63.29;MQ0=4;MQRankSum=-0.032;QD=18.25;ReadPosRankSum=3.527;VQSLOD=4.7641;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:17,25:42:63.21:990,63,0	1/1:6,9:15:24.08:370,24,0	0/0:30,0:25:15.05:0,15,297	0/0:17,0:17:9.03:0,9,196	1/1:18,19:37:60.20:949,60,0	1/1:11,0:28:27.03:251,27,0	1/1:9,0:15:6.01:56,6,0	0/1:33,0:43:49.78:50,0,62	0/0:24,0:24:42.13:0,42,906	1/1:16,14:30:42.14:662,42,0	1/1:6,16:22:39.13:619,39,0	1/1:11,0:30:39.04:363,39,0	1/1:13,9:22:33.11:524,33,0	1/1:5,19:24:45.15:714,45,0	1/1:6,0:28:38.93:363,39,0	1/1:5,0:27:36.04:335,36,0	1/1:10,21:31:54.14:818,54,0	1/1:12,0:20:15.02:140,15,0	1/1:17,0:25:21.01:195,21,0	1/1:5,0:15:4.68:126,5,0	./.	1/1:8,0:19:9.01:84,9,0	1/1:8,15:23:44.62:686,45,0	1/1:9,21:30:45.15:714,45,0	1/1:10,0:29:36.04:335,36,0	1/1:15,18:33:54.16:801,54,0	1/1:8,17:25:42.14:667,42,0	1/1:1,19:20:51.17:810,51,0
chr10	18609440	.	A	ACTTT	9421.36	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-13.629;DP=489;FS=0.000;HRun=0;HaplotypeScore=68.8723;InbreedingCoeff=0.9875;MQ=73.66;MQ0=0;MQRankSum=-2.423;QD=62.39;ReadPosRankSum=3.841;VQSLOD=6.3168;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:7:21.07:0,21,386	0/0:6,0:6:15.04:0,15,238	0/0:11,0:12:24.08:0,24,428	0/0:6,0:6:15.05:0,15,263	0/0:33,0:33:99:0,99,1777	1/1:0,29:30:72.20:1801,72,0	1/1:3,8:11:21.07:555,21,0	0/0:26,0:26:75.26:0,75,1351	0/0:12,0:12:36.11:0,36,623	0/0:28,0:28:81.28:0,81,1486	0/0:25,0:25:72.25:0,72,1314	1/1:3,17:21:51.18:1347,51,0	0/0:15,0:15:42.12:0,42,740	0/0:21,0:21:60.21:0,60,1089	1/1:3,17:20:48.16:1267,48,0	1/1:0,14:14:39.13:1029,39,0	0/0:18,0:18:54.17:0,54,960	1/1:0,18:18:45.12:1130,45,0	0/0:15,0:15:45.15:0,45,793	0/0:24,0:24:69.21:0,69,1203	0/0:4,0:4:12.02:0,12,190	1/1:3,13:16:36.12:868,36,0	0/0:14,0:14:42.10:0,42,675	0/0:9,0:9:24.08:0,24,442	1/1:1,19:21:54.19:1425,54,0	0/0:17,0:17:48.16:0,48,883	0/0:31,0:31:87.30:0,87,1580	0/0:15,0:15:45.15:0,45,821
chr10	18609633	.	CAT	C	6527.53	PASS	AB=0.897;AC=52;AF=0.929;AN=56;BaseQRankSum=0.086;DP=371;FS=2.522;HRun=0;HaplotypeScore=107.4340;InbreedingCoeff=0.4159;MQ=67.88;MQ0=1;MQRankSum=-3.183;QD=17.88;ReadPosRankSum=2.469;VQSLOD=4.9697;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,9:13:23.66:259,24,0	1/1:0,7:7:21.06:241,21,0	0/0:6,0:5:4.82:0,5,32	0/1:14,1:9:0.98:1,0,77	1/1:9,11:20:33.07:365,33,0	1/1:5,0:18:11.06:88,11,0	1/1:4,0:9:10.94:47,11,0	1/1:18,15:34:33.08:800,33,0	0/1:5,1:6:24.90:25,0,128	1/1:6,7:13:32.84:375,33,0	1/1:6,23:29:45.10:495,45,0	1/1:4,0:12:4.79:51,5,0	1/1:0,6:6:18.05:208,18,0	1/1:2,11:13:27.08:317,27,0	1/1:4,0:11:14.26:63,14,0	1/1:3,0:18:39.01:179,39,0	1/1:6,6:13:29.88:333,30,0	1/1:8,0:14:13.01:58,13,0	1/1:8,7:15:36.10:425,36,0	1/1:9,11:19:45.12:516,45,0	1/1:5,2:7:9.02:102,9,0	1/1:1,0:8:8.02:36,8,0	1/1:1,5:6:15.05:181,15,0	1/1:2,3:5:9.01:96,9,0	1/1:1,0:12:22.38:104,22,0	1/1:9,9:18:29.46:422,29,0	1/1:5,10:15:39.10:451,39,0	1/1:6,2:8:24.07:290,24,0
chr10	18609651	.	CAT	C	7901.96	PASS	AB=0.842;AC=51;AF=0.911;AN=56;BaseQRankSum=-3.210;DP=394;FS=5.339;HRun=0;HaplotypeScore=123.6671;InbreedingCoeff=0.3302;MQ=67.89;MQ0=2;MQRankSum=0.338;QD=20.31;ReadPosRankSum=4.424;VQSLOD=5.1967;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,9:13:30.09:368,30,0	1/1:0,11:11:21.04:248,21,0	0/1:9,0:8:3.93:4,0,55	0/1:15,0:10:9.80:10,0,38	1/1:2,15:17:24.07:286,24,0	1/1:0,15:15:5.79:241,6,0	1/1:1,6:7:9.02:99,9,0	1/1:10,32:42:79.59:1154,80,0	0/0:5,0:5:8.70:0,9,107	1/1:4,13:17:42.13:520,42,0	1/1:15,14:29:50.86:667,51,0	1/1:2,9:11:5.85:139,6,0	1/1:2,6:8:24.06:275,24,0	1/1:3,9:12:33.03:380,33,0	1/1:1,9:10:19.45:179,19,0	1/1:2,18:20:28.99:387,29,0	1/1:4,11:15:18.05:215,18,0	1/1:3,7:10:10.69:135,11,0	1/1:5,13:17:33.10:395,33,0	1/1:10,11:20:38.21:444,38,0	1/1:5,2:7:15.03:165,15,0	0/1:1,8:10:8.91:83,0,9	1/1:0,7:7:12.02:148,12,0	1/1:0,6:6:3.01:37,3,0	1/1:1,12:13:17.94:289,18,0	1/1:4,11:15:33.10:403,33,0	1/1:2,16:18:30.09:364,30,0	1/1:10,2:12:24.04:269,24,0
chr10	18609682	.	T	TACACACAC	3575.50	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=1.787;DP=458;FS=2.142;HRun=0;HaplotypeScore=170.4393;InbreedingCoeff=0.8623;MQ=67.70;MQ0=1;MQRankSum=-9.755;QD=27.93;ReadPosRankSum=-2.530;VQSLOD=3.1355;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:18.01:0,18,677	0/0:15,0:15:39.50:0,39,713	0/0:18,0:16:36.11:0,36,800	0/0:16,0:14:21.25:0,21,613	0/0:22,0:22:50.85:0,51,1099	1/1:4,13:17:21.07:605,21,0	1/1:4,1:7:3.01:35,3,0	0/0:36,0:36:66.23:0,66,1577	0/0:9,0:9:24.08:0,24,593	0/0:22,0:22:63.21:0,63,1445	0/0:26,0:26:60.20:0,60,1448	1/1:2,8:10:12.04:424,12,0	0/0:10,0:10:27.09:0,27,668	0/0:17,0:17:45.15:0,45,1207	1/1:4,8:15:18.06:436,18,0	1/1:6,13:22:27.09:885,27,0	0/1:14,0:14:25.48:25,0,632	1/1:4,3:10:9.03:266,9,0	0/0:19,0:19:51.16:0,51,1212	0/0:19,0:19:51.16:0,51,1240	0/0:10,0:10:21.07:0,21,563	1/1:2,10:14:21.07:508,21,0	0/0:11,0:11:18.06:0,18,480	0/0:12,0:12:30.06:0,30,713	1/1:7,11:19:18.06:391,18,0	0/0:16,0:16:42.14:0,42,1086	0/0:23,0:23:51.13:0,51,1313	0/0:12,0:12:36.12:0,36,948
chr10	18610356	.	C	CT	15193.09	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-11.580;DP=597;FS=1.016;HRun=0;HaplotypeScore=87.3297;InbreedingCoeff=0.9967;MQ=75.94;MQ0=0;MQRankSum=-0.891;QD=39.46;ReadPosRankSum=2.777;VQSLOD=5.3994;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,56:58:99:2416,160,0	1/1:0,6:6:15.01:229,15,0	0/0:16,0:16:47.77:0,48,592	0/0:15,0:14:41.98:0,42,517	1/1:1,19:20:51.10:752,51,0	0/0:25,0:25:75.24:0,75,1029	0/0:30,0:30:90.28:0,90,1219	1/1:0,23:23:69.20:991,69,0	0/0:17,0:17:51.13:0,51,647	1/1:2,12:14:33.11:501,33,0	1/1:0,11:11:27.02:384,27,0	0/0:14,0:14:42.11:0,42,539	1/1:0,13:13:32.98:502,33,0	1/1:1,22:23:43.24:887,43,0	0/0:28,0:28:84.21:0,84,1134	0/0:7,0:7:21.07:0,21,294	1/1:2,36:38:96.32:1455,96,0	0/0:23,0:23:39.24:0,39,814	1/1:2,23:25:72.16:997,72,0	1/1:0,12:12:27.02:382,27,0	1/1:0,29:29:66.22:1009,66,0	0/0:13,0:13:39.12:0,39,528	1/1:1,17:18:44.49:688,44,0	1/1:0,38:38:99:1606,105,0	0/0:24,0:24:69.21:0,69,920	1/1:1,20:21:63.20:932,63,0	1/1:0,24:24:63.21:959,63,0	1/1:0,12:12:33.11:505,33,0
chr10	18611652	.	C	CA	2217.98	PASS	AB=0.735;AC=26;AF=0.464;AN=56;BaseQRankSum=-4.975;DP=597;FS=0.000;HRun=14;HaplotypeScore=89.5725;InbreedingCoeff=0.5306;MQ=68.25;MQ0=2;MQRankSum=0.547;QD=6.76;ReadPosRankSum=-3.179;VQSLOD=2.0058;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,16:24:21.41:208,21,0	1/1:0,8:9:20.84:172,21,0	1/1:14,0:9:2.27:7,2,0	0/1:12,0:6:7.01:10,0,7	1/1:13,18:35:15.82:244,16,0	0/0:22,3:34:12.75:0,13,269	0/0:14,0:15:6.02:0,6,137	0/0:12,0:26:26.49:0,26,87	0/0:27,0:27:32.03:0,32,211	1/1:6,15:23:25.25:260,25,0	0/1:12,14:27:32.01:190,0,32	0/0:21,0:22:7.69:0,8,154	0/1:11,10:21:1.03:91,0,1	1/1:13,4:17:1.68:126,2,0	0/0:9,0:11:18.75:0,19,108	0/0:24,0:25:22.66:0,23,251	0/1:7,14:21:10.66:159,0,11	0/1:9,2:12:8.67:9,0,78	0/0:7,0:15:23.28:0,23,78	0/0:10,0:27:27.90:0,28,81	0/0:8,0:24:26.13:0,26,76	0/0:22,0:23:43.62:0,44,261	1/1:14,16:33:9.83:208,10,0	1/1:3,9:13:14.14:152,14,0	0/0:16,0:20:28.63:0,29,156	1/1:11,17:29:15.80:269,16,0	0/1:12,16:29:70.72:177,0,71	1/1:2,7:9:15:132,15,0
chr10	18612062	.	AG	A	7138.15	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-7.984;DP=544;FS=11.646;HRun=9;HaplotypeScore=79.3512;InbreedingCoeff=0.9841;MQ=85.11;MQ0=0;MQRankSum=-1.487;QD=21.50;ReadPosRankSum=2.761;VQSLOD=5.0784;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,16:18:27.01:247,27,0	1/1:0,14:14:35.92:318,36,0	0/0:32,1:27:7.40:0,7,275	0/0:21,0:19:25.54:0,26,301	1/1:2,17:19:47.90:421,48,0	0/0:4,0:14:19.95:0,20,102	0/0:5,0:19:34.55:0,35,203	1/1:5,19:25:46.75:502,47,0	0/0:24,0:24:69.18:0,69,776	1/1:3,24:27:69.02:628,69,0	1/1:1,22:23:62.94:558,63,0	0/0:5,0:20:34.58:0,35,220	1/1:3,23:26:54.02:494,54,0	1/1:1,23:24:59.99:540,60,0	0/0:5,0:16:28.56:0,29,154	0/0:1,0:10:19.89:0,20,101	1/1:0,16:16:45.02:412,45,0	0/0:6,0:21:34.09:0,34,173	1/1:2,11:13:32.96:282,33,0	1/1:1,20:21:53.95:479,54,0	1/1:1,8:9:18.01:165,18,0	0/0:3,0:20:42.45:0,42,214	1/1:2,21:23:50.84:466,51,0	1/1:3,12:15:27.01:247,27,0	0/0:1,0:14:19.89:0,20,101	1/1:3,20:23:59.95:528,60,0	1/1:1,25:26:66.02:604,66,0	1/1:0,10:10:27.01:247,27,0
chr10	18615205	.	GA	G	4144.64	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=13.021;DP=589;FS=3.107;HRun=7;HaplotypeScore=55.7342;InbreedingCoeff=0.9154;MQ=70.99;MQ0=0;MQRankSum=-0.474;QD=26.57;ReadPosRankSum=2.935;VQSLOD=4.4461;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,105,1258	0/0:9,0:9:27.09:0,27,339	0/0:16,0:16:16.38:0,16,402	0/1:6,0:6:14.48:14,0,99	0/0:24,0:24:66.21:0,66,830	1/1:1,24:25:66.15:673,66,0	1/1:2,20:22:60.13:612,60,0	0/0:35,0:34:99:0,102,1252	0/0:13,0:13:36.10:0,36,439	0/0:24,0:24:63.20:0,63,790	0/0:31,0:31:84.25:0,84,1034	1/1:1,13:14:39.09:398,39,0	0/0:20,0:20:54.16:0,54,668	0/0:16,0:16:45.14:0,45,566	1/1:0,25:25:75.17:765,75,0	1/1:1,10:11:20.92:214,21,0	0/0:32,0:32:84.26:0,84,1043	1/1:1,13:14:39.09:398,39,0	0/0:20,0:20:57.18:0,57,713	0/0:20,0:20:51.16:0,51,642	0/0:21,0:21:60.18:0,60,739	1/1:2,22:24:63.14:643,63,0	0/0:22,0:22:66.20:0,66,817	0/0:11,0:11:27.08:0,27,328	1/1:0,15:15:42.10:428,42,0	0/0:36,0:36:96.26:0,96,1170	0/0:27,0:27:72.22:0,72,893	0/0:16,0:16:45.14:0,45,566
chr10	18616492	.	TCTC	T	1822.11	PASS	AB=0.940;AC=15;AF=0.268;AN=56;BaseQRankSum=9.556;DP=447;FS=18.446;HRun=0;HaplotypeScore=86.7952;InbreedingCoeff=0.0107;MQ=84.82;MQ0=1;MQRankSum=-2.214;QD=8.06;ReadPosRankSum=9.223;VQSLOD=0.5184;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:30,1:31:99:186,0,133	0/1:11,1:12:64.62:65,0,100	0/0:28,0:22:52.08:0,52,571	0/0:19,0:17:11.85:0,12,194	1/1:7,1:8:11.96:123,12,0	0/0:9,0:9:23.65:0,24,253	0/0:16,0:16:29.38:0,29,263	0/0:26,0:26:56.74:0,57,524	0/0:8,0:8:17.92:0,18,231	0/1:12,2:14:26.33:139,0,26	0/1:11,1:12:24.73:25,0,108	0/0:9,0:9:17.70:0,18,193	1/1:14,3:17:40.07:296,40,0	0/1:16,1:17:6.79:199,0,7	0/0:13,0:13:26.36:0,26,288	0/0:16,0:15:29.64:0,30,295	0/1:20,1:21:17.87:160,0,18	0/0:20,0:20:37.89:0,38,510	0/0:6,0:6:18.01:0,18,164	0/0:9,0:9:20.39:0,20,144	0/0:22,0:22:50.80:0,51,462	0/0:7,0:7:17.97:0,18,187	0/1:16,0:16:99:128,0,128	0/1:34,0:34:99:216,0,215	0/0:12,0:12:27.90:0,28,297	0/1:15,2:17:29.28:165,0,29	0/1:19,4:23:49.46:275,0,49	0/1:4,0:4:14.34:14,0,37
chr10	18616494	.	TCCC	T	4676.36	PASS	AB=0.833;AC=27;AF=0.482;AN=56;BaseQRankSum=-0.504;DP=452;FS=40.955;HRun=13;HaplotypeScore=78.7737;InbreedingCoeff=0.8005;MQ=84.18;MQ0=1;MQRankSum=-1.423;QD=19.17;ReadPosRankSum=5.257;VQSLOD=0.6360;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:9,22:31:39.01:474,39,0	1/1:5,6:11:7.99:107,8,0	0/0:28,0:23:33.54:0,34,388	0/0:22,0:16:13.80:0,14,87	1/1:2,6:8:12.04:144,12,0	0/0:9,0:10:5.59:0,6,124	0/0:11,0:16:14.81:0,15,101	0/0:21,0:26:3.68:0,4,64	0/0:8,0:8:9:0,9,145	1/1:5,8:13:30.08:362,30,0	1/1:8,4:12:8.95:106,9,0	0/0:10,0:10:8.76:0,9,115	1/1:4,12:16:42.13:510,42,0	1/1:6,11:17:36.05:435,36,0	0/0:9,0:12:17.51:0,18,186	0/0:8,0:15:13.25:0,13,140	1/1:4,17:21:36.07:437,36,0	0/1:16,1:20:4.16:4,0,260	0/0:7,0:7:5.96:0,6,43	0/0:6,0:9:3.98:0,4,25	0/0:22,0:23:14.97:0,15,148	0/0:5,0:6:8.99:0,9,76	1/1:7,8:16:26.94:309,27,0	1/1:13,21:34:60.05:729,60,0	0/0:12,0:13:13.20:0,13,137	1/1:5,12:17:39.06:460,39,0	1/1:8,15:24:45.02:527,45,0	1/1:2,2:4:5.99:73,6,0
chr10	18618127	.	C	CG	252.99	PASS	AB=0.611;AC=7;AF=0.125;AN=56;BaseQRankSum=1.180;DP=335;FS=1.923;HRun=0;HaplotypeScore=64.2190;InbreedingCoeff=0.6644;MQ=93.51;MQ0=1;MQRankSum=-1.280;QD=6.66;ReadPosRankSum=-0.838;VQSLOD=2.9249;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:26.78:0,27,249	0/0:4,0:4:9.47:0,9,79	0/0:26,0:22:61.94:0,62,595	0/0:28,0:27:29.52:0,30,394	0/0:12,0:12:21.87:0,22,182	0/0:12,0:12:23.42:0,23,195	0/0:16,0:16:22.93:0,23,126	1/1:5,0:5:5.09:41,5,0	0/0:10,0:10:27.03:0,27,306	0/0:5,0:5:12.01:0,12,109	0/0:9,0:9:15.23:0,15,132	0/0:15,0:15:20.94:0,21,187	0/0:9,0:9:17.96:0,18,149	0/0:11,0:11:23.47:0,23,190	0/0:9,0:9:8.94:0,9,70	0/0:12,0:12:10.44:0,10,73	0/0:25,0:25:15.33:0,15,185	0/0:17,0:17:35.42:0,35,251	1/1:5,10:15:33.09:226,33,0	1/1:7,0:7:16.79:114,17,0	0/1:4,7:11:6.05:6,0,12	0/0:9,0:9:12:0,12,103	0/0:9,0:9:9.45:0,9,73	0/0:14,0:14:28.51:0,29,267	0/0:11,0:11:20.85:0,21,162	0/0:2,0:2:3:0,3,27	0/0:13,0:12:25.10:0,25,193	0/0:3,0:3:3.73:0,4,16
chr10	18618137	.	C	CCG	1246.79	PASS	AB=1.000;AC=27;AF=0.482;AN=56;BaseQRankSum=-0.491;DP=363;FS=0.583;HRun=0;HaplotypeScore=89.6352;InbreedingCoeff=0.6196;MQ=88.55;MQ0=1;MQRankSum=-2.674;QD=7.21;ReadPosRankSum=-4.617;VQSLOD=1.9833;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:8.82:0,9,105	0/0:4,0:4:6.47:0,6,52	0/0:25,0:21:37.43:0,37,337	0/0:26,0:26:33.96:0,34,322	0/0:14,0:15:12.05:0,12,88	1/1:4,1:12:9.32:80,9,0	1/1:7,0:16:21.31:162,21,0	1/1:5,0:6:15.27:112,15,0	0/0:11,0:11:23.95:0,24,254	0/0:5,0:5:5.98:0,6,56	0/1:10,0:10:14.83:15,0,44	1/1:11,1:13:14.67:145,15,0	0/0:9,0:9:8.72:0,9,78	0/0:13,0:13:14.69:0,15,116	1/1:8,1:9:23.88:185,24,0	1/1:2,6:15:10.71:94,11,0	0/0:26,0:26:26.90:0,27,227	1/1:13,1:25:23.75:203,24,0	1/1:13,0:13:23.91:165,24,0	1/1:1,1:7:12.01:57,12,0	1/1:9,0:9:5.93:41,6,0	1/1:0,9:11:3:25,3,0	0/0:15,0:15:17.77:0,18,134	0/0:16,0:16:2.71:0,3,178	1/1:1,9:11:3.01:53,3,0	0/0:8,0:8:8.98:0,9,81	0/1:13,0:13:23.54:94,0,24	0/1:3,0:3:16.83:18,0,17
chr10	18619572	.	GTCTCTC	G	764.56	PASS	AB=0.921;AC=22;AF=0.550;AN=40;BaseQRankSum=2.831;DP=559;FS=2.919;HRun=0;HaplotypeScore=125.6716;InbreedingCoeff=0.2378;MQ=65.86;MQ0=16;MQRankSum=-0.486;QD=2.82;ReadPosRankSum=-1.915;VQSLOD=2.0187;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:40,0:39:46.61:266,0,47	./.	./.	./.	0/0:18,0:18:3.01:0,3,32	./.	0/1:11,0:14:5.68:21,0,6	1/1:40,0:39:5.52:74,6,0	0/1:19,0:19:41.98:42,0,115	0/0:22,0:22:8.94:0,9,104	0/0:15,0:14:3.01:0,3,73	1/1:9,0:12:8.39:94,8,0	0/1:12,0:13:0.20:0,0,78	0/0:22,0:22:6.80:0,7,275	./.	0/1:21,0:20:85.27:85,0,218	1/1:9,2:18:10.80:140,11,0	1/1:10,0:9:0.88:2,1,0	./.	1/1:20,1:21:2.96:20,3,0	./.	0/1:18,1:21:0:0,0,0	0/0:19,0:19:8.98:0,9,95	0/0:21,0:21:14.88:0,15,164	./.	1/1:16,1:16:3.01:60,3,0	1/1:13,1:16:7.77:87,8,0	1/1:4,0:4:0.89:2,1,0
chr10	18619623	.	TTC	T	879.89	PASS	AB=1.000;AC=18;AF=0.360;AN=50;BaseQRankSum=2.597;DP=439;FS=0.605;HRun=0;HaplotypeScore=116.8162;InbreedingCoeff=-0.2268;MQ=37.84;MQ0=22;MQRankSum=1.836;QD=3.17;ReadPosRankSum=2.643;VQSLOD=2.5108;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:32,0:29:6.21:345,6,0	1/1:4,0:4:3.01:31,3,0	./.	./.	0/0:16,0:14:2.74:0,3,12	0/0:17,1:17:5:0,5,36	0/0:19,0:18:7.92:0,8,56	0/0:21,0:20:21.16:0,21,490	0/1:27,0:26:43.40:43,0,210	0/1:25,0:22:99:100,0,344	0/0:8,3:10:3.20:0,3,42	0/1:17,0:17:17.57:22,0,18	0/1:17,0:16:1.71:2,0,96	0/1:16,0:16:11.86:12,0,35	./.	0/1:19,0:18:9.05:116,0,9	0/1:18,0:18:16.37:39,0,16	0/1:10,0:7:17.55:48,0,18	0/0:8,0:7:14.26:0,14,110	0/0:10,0:10:2.84:0,3,14	0/0:20,0:14:8.99:0,9,90	0/1:18,0:17:0:0,0,0	0/1:18,0:17:3.68:86,0,4	0/1:15,0:14:10.19:101,0,10	0/0:18,0:14:2.39:0,2,32	0/1:11,0:10:7.09:7,0,150	0/1:18,0:18:42.27:42,0,130	0/1:13,0:6:22.38:22,0,99
chr10	18619625	.	CGTGTGTGT	C	835.18	PASS	AB=0.812;AC=18;AF=0.346;AN=52;BaseQRankSum=1.481;DP=442;FS=10.588;HRun=0;HaplotypeScore=139.8979;InbreedingCoeff=0.4671;MQ=38.04;MQ0=23;MQRankSum=-5.155;QD=4.69;ReadPosRankSum=-1.396;VQSLOD=1.7225;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:30:15.74:0,16,244	0/0:4,0:4:3.01:0,3,63	./.	./.	0/0:14,0:14:3.48:0,3,65	0/1:12,0:18:23.71:86,0,24	1/1:16,3:18:5.48:83,5,0	0/1:19,0:18:0:0,0,0	0/0:27,0:27:24.95:0,25,846	0/0:24,0:22:5.36:0,5,475	0/0:11,0:10:6.49:0,6,131	1/1:10,6:17:8.54:124,9,0	0/0:9,0:16:12.51:0,13,255	0/0:11,0:16:6.02:0,6,123	1/1:18,4:22:2.66:29,3,0	1/1:12,6:17:15.05:361,15,0	0/0:19,0:19:7.04:0,7,88	1/1:9,0:7:8.52:126,9,0	1/1:6,1:6:3.01:74,3,0	0/1:5,0:10:1.26:7,0,1	0/0:20,0:14:0.47:0,0,1	1/1:14,6:18:11.56:83,12,0	0/0:16,0:16:9.48:0,9,153	0/0:15,0:14:8.98:0,9,109	0/1:14,1:13:19.96:20,0,49	0/0:9,0:10:15.04:0,15,304	0/0:12,0:19:5.47:0,5,266	0/0:12,0:6:6:0,6,88
chr10	18619771	.	TAGA	T	2188.08	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=7.358;DP=590;FS=10.073;HRun=0;HaplotypeScore=100.1564;InbreedingCoeff=0.9897;MQ=86.74;MQ0=0;MQRankSum=-3.450;QD=29.97;ReadPosRankSum=1.490;VQSLOD=3.7787;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:84.29:0,84,1836	0/0:4,0:4:12.04:0,12,264	0/0:26,0:26:69.24:0,69,1404	0/0:25,0:25:59.35:0,59,1134	0/0:21,0:21:39.13:0,39,803	0/0:20,0:19:42.12:0,42,839	0/0:23,0:23:66.15:0,66,1364	1/1:3,11:14:27.56:434,28,0	0/0:41,0:41:99:0,111,2419	0/0:22,0:21:54.19:0,54,1151	0/0:12,0:12:27.09:0,27,543	0/0:25,0:25:60.21:0,60,1308	0/0:18,0:18:48.16:0,48,1030	0/0:24,0:24:60.12:0,60,1217	0/0:28,0:28:78.27:0,78,1718	0/0:27,0:27:72.21:0,72,1535	0/0:25,0:25:57.15:0,57,1188	0/0:19,0:19:51.15:0,51,1082	1/1:2,9:11:27.09:432,27,0	1/1:3,13:16:27.09:433,27,0	1/1:6,26:32:66.22:1049,66,0	0/0:24,0:24:45.15:0,45,991	0/0:16,0:16:33.11:0,33,636	0/0:24,0:24:72.25:0,72,1589	0/0:22,0:22:51.18:0,51,1124	0/0:20,0:20:54.18:0,54,1153	0/0:13,0:13:36.11:0,36,752	0/0:8,0:8:24.08:0,24,529
chr10	18620160	.	A	AT	208.97	PASS	AB=0.842;AC=6;AF=0.107;AN=56;BaseQRankSum=12.570;DP=757;FS=16.339;HRun=0;HaplotypeScore=229.9239;InbreedingCoeff=-0.1442;MQ=42.23;MQ0=1;MQRankSum=-9.294;QD=1.11;ReadPosRankSum=5.062;VQSLOD=0.9367;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:28,3:32:16.29:16,0,726	0/1:11,4:17:33.98:34,0,229	0/0:13,0:8:27.09:0,27,378	0/0:14,0:12:32.45:0,32,397	0/0:29,8:39:8.69:0,9,231	0/0:23,0:23:40.23:0,40,704	0/0:18,1:19:48.12:0,48,646	0/0:18,0:18:53.67:0,54,717	0/0:25,7:32:1.20:0,1,775	0/1:40,8:55:99:178,0,813	0/0:31,5:38:34.85:0,35,554	0/0:34,2:36:72.45:0,72,1043	0/0:25,4:29:65.92:0,66,871	0/0:20,6:26:49.02:0,49,620	0/0:32,1:33:70.19:0,70,1106	0/0:27,2:29:57.53:0,58,838	0/0:12,1:13:33.11:0,33,454	0/0:14,0:14:24.97:0,25,447	0/0:22,0:21:0.74:0,1,673	0/0:22,14:39:7.20:0,7,210	0/0:21,0:21:54.16:0,54,719	0/0:33,2:39:62.60:0,63,734	0/0:22,4:28:20.77:0,21,411	0/0:17,1:18:29.61:0,30,515	0/1:38,2:41:8.82:9,0,589	0/1:26,9:35:66.03:66,0,700	0/0:20,4:25:18.25:0,18,652	0/1:4,3:7:25.84:26,0,112
chr10	18622800	.	T	TAC	1604.11	PASS	AB=0.933;AC=37;AF=0.740;AN=50;BaseQRankSum=-0.014;DP=518;FS=2.204;HRun=0;HaplotypeScore=92.9155;InbreedingCoeff=0.0755;MQ=56.61;MQ0=4;MQRankSum=-0.286;QD=3.68;ReadPosRankSum=0.239;VQSLOD=2.3890;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:33:11.36:0,11,56	1/1:13,0:13:10.39:76,10,0	./.	./.	1/1:21,0:19:3:28,3,0	1/1:15,0:16:11.69:150,12,0	1/1:24,0:23:5.50:39,6,0	0/1:24,0:24:0:0,0,0	0/0:14,0:14:8.78:0,9,88	1/1:20,1:21:6.48:63,6,0	0/1:6,7:13:12.97:118,0,13	0/0:11,0:11:0.47:0,0,1	1/1:6,4:15:12.01:122,12,0	1/1:11,1:19:7.84:88,8,0	1/1:20,0:20:3:29,3,0	./.	0/1:26,1:26:35.17:151,0,35	1/1:5,0:5:3:29,3,0	1/1:26,0:26:6.45:50,6,0	0/1:18,0:18:38.47:127,0,38	1/1:34,1:36:23.98:236,24,0	1/1:20,0:20:5.98:46,6,0	1/1:18,0:18:14.60:92,15,0	0/1:31,3:34:35.41:136,0,35	1/1:15,0:15:3.89:33,4,0	0/1:19,0:18:15.99:44,0,16	0/1:23,0:23:43.16:43,0,87	1/1:8,0:7:3.48:43,3,0
chr10	18622847	.	A	ACC	1628.52	PASS	AB=0.859;AC=18;AF=0.321;AN=56;BaseQRankSum=7.695;DP=626;FS=5.475;HRun=4;HaplotypeScore=103.8648;InbreedingCoeff=0.4258;MQ=62.77;MQ0=14;MQRankSum=-1.995;QD=7.44;ReadPosRankSum=-1.710;VQSLOD=-0.6321;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:54.07:0,54,438	0/0:13,0:13:5.64:0,6,160	0/0:29,0:12:35.92:0,36,320	0/0:33,0:16:38.12:0,38,386	0/0:20,0:24:9.11:0,9,143	1/1:14,0:13:28.12:248,28,0	0/1:5,13:19:17.60:36,0,18	0/0:23,0:23:47.85:0,48,411	0/0:24,0:24:55.44:0,55,487	0/0:28,0:28:26.06:0,26,378	0/1:25,0:25:7.89:8,0,272	1/1:22,0:22:53.16:449,53,0	0/0:28,0:26:8.62:0,9,267	0/0:25,0:25:1.06:0,1,162	0/1:6,15:21:8.32:82,0,8	1/1:16,0:16:18.08:315,18,0	0/0:29,0:28:3.76:0,4,368	1/1:6,1:6:18:179,18,0	0/0:19,0:19:31.38:0,31,298	0/1:16,0:16:21.67:22,0,155	0/0:36,0:36:3.17:0,3,283	1/1:23,0:23:44.14:404,44,0	0/0:20,0:20:32.84:0,33,260	0/1:26,0:26:8.90:9,0,297	1/1:6,0:18:5.81:53,6,0	0/0:22,0:19:41.57:0,42,334	0/0:23,0:23:47.56:0,48,404	0/1:9,0:9:8.23:8,0,111
chr10	18623470	.	A	AAC	933.11	PASS	AB=0.969;AC=30;AF=0.682;AN=44;BaseQRankSum=-2.522;DP=494;FS=8.962;HRun=0;HaplotypeScore=86.4746;InbreedingCoeff=-0.0142;MQ=66.12;MQ0=5;MQRankSum=0.993;QD=2.88;ReadPosRankSum=1.721;VQSLOD=0.9880;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:32,0:31:6.45:20,0,6	1/1:5,4:9:2.90:44,3,0	./.	./.	0/1:12,0:12:0.80:1,0,27	1/1:17,4:21:3:28,3,0	0/1:16,0:16:9.17:9,0,25	./.	0/0:13,0:17:5.48:0,5,24	1/1:15,0:14:6.01:55,6,0	1/1:13,4:18:6.02:77,6,0	1/1:17,0:17:13.22:106,13,0	1/1:15,0:15:6:62,6,0	1/1:10,0:10:2.99:23,3,0	0/0:8,0:8:2.98:0,3,23	1/1:11,4:17:6.49:88,6,0	0/1:18,0:19:21.43:21,0,26	0/1:16,0:16:24.24:33,0,24	./.	./.	./.	1/1:21,0:21:5.94:85,6,0	0/0:13,0:13:2.99:0,3,25	0/1:25,0:25:42.76:85,0,43	0/1:19,0:19:12:12,0,18	1/1:14,0:13:9.02:112,9,0	1/1:9,2:11:11.99:132,12,0	0/1:12,4:15:40.56:74,0,41
chr10	18625414	.	ATC	A	569.29	PASS	AB=0.926;AC=14;AF=0.280;AN=50;BaseQRankSum=-1.337;DP=451;FS=13.911;HRun=0;HaplotypeScore=94.8551;InbreedingCoeff=0.4301;MQ=71.15;MQ0=6;MQRankSum=3.092;QD=4.52;ReadPosRankSum=1.990;VQSLOD=1.8002;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:17:2.99:0,3,24	0/0:8,0:8:0:0,0,0	0/0:23,0:13:5.96:0,6,43	0/0:25,0:18:2.95:0,3,159	0/0:19,0:20:9.45:0,9,92	0/1:20,0:20:7.11:7,0,312	0/1:18,0:17:10.13:10,0,280	0/0:28,0:27:28.22:0,28,300	0/1:19,0:19:1.13:1,0,402	0/0:19,0:19:21.30:0,21,180	0/0:26,0:25:2.86:0,3,42	1/1:8,0:8:6.02:68,6,0	0/0:13,0:8:8.92:0,9,80	./.	1/1:4,2:6:3.01:34,3,0	1/1:11,0:12:15.04:171,15,0	0/0:14,0:13:12.03:0,12,148	1/1:13,0:13:23.90:252,24,0	0/0:21,0:20:6.02:0,6,73	0/0:17,0:17:2.90:0,3,20	./.	0/1:11,8:18:0:0,0,0	0/0:13,0:13:2.92:0,3,17	./.	1/1:11,0:11:17.84:170,18,0	0/0:17,0:17:19.73:0,20,188	0/0:21,0:20:17.82:0,18,135	0/0:6,0:5:3:0,3,25
chr10	18625426	.	C	CTCTCTCTCTCTC	4658.95	PASS	AB=1.000;AC=33;AF=0.635;AN=52;BaseQRankSum=-0.184;DP=440;FS=11.711;HRun=0;HaplotypeScore=148.6717;InbreedingCoeff=0.4906;MQ=53.05;MQ0=22;MQRankSum=-5.063;QD=14.93;ReadPosRankSum=-3.390;VQSLOD=2.2323;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:17:3.01:90,3,0	1/1:8,0:8:6.02:197,6,0	0/0:14,0:4:6.02:0,6,117	0/1:20,0:13:13.87:14,0,289	1/1:18,0:18:9.90:258,10,0	0/0:19,0:18:24.08:0,24,811	0/0:21,0:17:24.08:0,24,794	1/1:23,0:22:20.10:819,20,0	0/0:18,0:18:26.90:0,27,803	1/1:9,5:15:25.90:1055,26,0	1/1:28,0:26:2.07:24,2,0	0/0:5,0:3:6.02:0,6,168	1/1:12,0:7:3.01:124,3,0	./.	0/0:8,0:7:3.01:0,3,84	0/1:13,0:13:28.66:29,0,371	1/1:14,0:13:8.90:98,9,0	0/0:17,0:15:3.65:0,4,567	1/1:18,0:17:6.02:307,6,0	1/1:19,0:19:0.94:3,1,0	0/1:12,0:11:0:0,0,0	1/1:23,0:21:0.47:1,0,0	1/1:12,0:11:3.48:127,3,0	1/1:18,0:16:1.62:118,2,0	0/0:14,0:13:14.60:0,15,402	1/1:17,0:17:18.33:805,18,0	1/1:23,0:21:16.62:591,17,0	./.
chr10	18626840	.	AATC	A	4167.78	PASS	AB=0.824;AC=44;AF=0.880;AN=50;BaseQRankSum=9.112;DP=715;FS=0.000;HRun=0;HaplotypeScore=128.2066;InbreedingCoeff=0.5255;MQ=73.16;MQ0=5;MQRankSum=-3.810;QD=7.32;ReadPosRankSum=-1.677;VQSLOD=2.4181;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:18,13:32:30.06:367,30,0	1/1:7,0:11:2.98:21,3,0	./.	./.	1/1:22,0:29:8.63:53,9,0	1/1:5,0:12:11.73:76,12,0	1/1:19,10:29:21.07:269,21,0	./.	0/0:33,0:33:48.16:0,48,894	1/1:25,0:32:29.76:228,30,0	1/1:13,1:20:17.89:143,18,0	0/0:37,0:37:60.21:0,60,1122	1/1:14,0:23:20.83:147,21,0	1/1:15,0:22:14.77:96,15,0	1/1:23,13:36:24.08:308,24,0	1/1:24,12:36:21.07:269,21,0	1/1:15,0:22:20.09:134,20,0	1/1:11,7:18:18.06:231,18,0	1/1:11,4:15:12.04:154,12,0	1/1:11,12:23:30.06:367,30,0	0/1:22,18:40:17.34:422,0,17	0/1:22,1:22:11.36:11,0,409	1/1:17,0:30:20.33:131,20,0	1/1:15,0:26:11.14:66,11,0	1/1:12,14:26:33.11:423,33,0	1/1:19,0:27:14.87:105,15,0	1/1:13,0:19:14.65:96,15,0	1/1:12,0:17:8.68:51,9,0
chr10	18627384	.	A	ATCCTGAGAACATGTGGGACAAGC	3065.55	PASS	AB=0.764;AC=28;AF=0.933;AN=30;BaseQRankSum=-2.133;DP=43;FS=2.716;HRun=0;HaplotypeScore=38.1409;InbreedingCoeff=-0.2336;MQ=158.51;MQ0=0;MQRankSum=-1.681;QD=82.85;ReadPosRankSum=-0.129;VQSLOD=2.2060;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/1:6,1:8:15.24:1385,0,15	0/1:5,0:8:28.04:603,0,28	1/1:1,0:1:3.01:75,3,0	./.	./.	1/1:3,0:3:9.01:101,9,0	./.	1/1:2,0:2:6.02:180,6,0	1/1:1,0:1:3.01:57,3,0	1/1:1,0:1:3.01:55,3,0	1/1:4,0:4:3.01:74,3,0	1/1:1,0:1:3.01:56,3,0	./.	./.	./.	./.	1/1:2,0:2:6.02:168,6,0	1/1:1,0:1:3.01:106,3,0	1/1:1,0:1:3.01:75,3,0	./.	./.	./.	1/1:2,0:2:6.02:116,6,0	./.	1/1:1,0:1:3.01:56,3,0	1/1:1,0:1:3.01:48,3,0
chr10	18628231	.	C	CAGAG	1032.45	PASS	AB=1.000;AC=35;AF=0.833;AN=42;BaseQRankSum=-1.451;DP=527;FS=11.529;HRun=0;HaplotypeScore=119.0280;InbreedingCoeff=0.2395;MQ=73.83;MQ0=13;MQRankSum=-1.114;QD=3.10;ReadPosRankSum=1.181;VQSLOD=1.6301;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:33,0:33:4.81:28,5,0	./.	./.	./.	./.	./.	0/0:13,0:14:12.03:0,12,156	1/1:31,0:31:6.70:16,7,0	0/0:19,0:20:3:0,3,28	1/1:10,0:10:6.02:106,6,0	./.	1/1:24,0:24:3.01:39,3,0	1/1:18,0:18:3.48:41,3,0	0/1:14,0:14:0:0,0,0	1/1:20,5:27:3.01:69,3,0	1/1:19,0:19:3.01:39,3,0	0/1:14,0:14:36.07:66,0,36	1/1:23,0:23:5.30:46,5,0	1/1:18,0:17:4.26:54,4,0	0/1:12,0:12:0:0,0,0	1/1:20,0:20:5.32:96,5,0	./.	1/1:4,0:4:3.01:63,3,0	1/1:23,0:22:14.97:200,15,0	1/1:5,0:5:3.01:42,3,0	1/1:11,0:11:6.02:106,6,0	1/1:20,0:20:6.45:48,6,0	1/1:7,0:7:6.02:83,6,0
chr10	18628525	.	AATATAT	A	2092.43	PASS	AB=1.000;AC=10;AF=0.179;AN=56;BaseQRankSum=-3.690;DP=248;FS=7.012;HRun=0;HaplotypeScore=81.0567;InbreedingCoeff=0.5413;MQ=64.58;MQ0=2;MQRankSum=-2.650;QD=25.52;ReadPosRankSum=-0.161;VQSLOD=2.4934;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:10.03:0,10,515	0/0:2,0:2:6.02:0,6,156	0/1:5,0:5:0:0,0,0	0/1:6,0:3:20.25:20,0,21	0/0:10,0:11:13.41:0,13,371	0/0:3,0:5:3.01:0,3,76	0/0:2,0:2:3.01:0,3,68	1/1:9,14:24:42.58:777,43,0	0/0:8,0:10:21.07:0,21,530	0/0:6,0:6:12.04:0,12,304	0/0:9,0:9:12.03:0,12,215	0/0:1,0:2:3.01:0,3,79	0/0:13,0:13:33.11:0,33,913	0/0:6,0:6:12.02:0,12,303	0/0:2,0:5:9.03:0,9,198	0/0:3,0:3:6.01:0,6,94	0/0:21,0:20:42.14:0,42,1105	0/0:10,0:14:18.04:0,18,424	1/1:7,11:18:30.10:637,30,0	1/1:7,16:23:41.94:687,42,0	1/1:2,4:6:8.99:125,9,0	0/0:3,0:3:3:0,3,25	0/0:6,0:6:5.99:0,6,50	0/0:3,0:3:5.98:0,6,121	0/0:7,0:9:5.65:0,6,134	0/0:9,0:9:15.05:0,15,403	0/0:9,0:9:27.04:0,27,541	0/0:5,0:5:3.01:0,3,78
chr10	18628544	.	A	ATATT	4718.78	PASS	AB=0.988;AC=32;AF=0.571;AN=56;BaseQRankSum=3.037;DP=291;FS=0.507;HRun=0;HaplotypeScore=89.9184;InbreedingCoeff=0.2442;MQ=59.78;MQ0=2;MQRankSum=-3.878;QD=25.23;ReadPosRankSum=0.315;VQSLOD=4.6416;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:11:7.29:351,7,0	1/1:4,1:5:14.99:240,15,0	0/1:9,0:6:20.36:20,0,71	0/1:13,0:9:3.23:3,0,90	1/1:8,4:13:29.68:422,30,0	0/1:5,0:5:36.72:53,0,37	0/0:4,0:4:8.87:0,9,74	0/0:34,0:33:87.81:0,88,827	0/0:9,0:9:27.05:0,27,389	1/1:8,1:11:29.84:296,30,0	1/1:5,1:6:14.97:188,15,0	0/1:7,0:7:20.05:20,0,83	1/1:5,0:15:22.23:623,22,0	0/1:6,0:7:8.35:155,0,8	0/1:7,0:7:76.40:83,0,76	0/1:7,0:6:52.17:52,0,81	1/1:15,6:23:65.26:863,65,0	0/1:13,0:13:82.61:164,0,83	0/0:22,0:21:59.97:0,60,598	0/0:23,0:23:47.94:0,48,484	0/0:9,0:9:10.25:0,10,106	0/0:3,0:3:8.99:0,9,75	1/1:1,0:1:2.97:20,3,0	0/1:4,0:4:10.85:45,0,11	0/1:8,0:8:8.56:109,0,9	1/1:6,2:8:24:362,24,0	1/1:6,5:11:30.04:544,30,0	1/1:1,1:2:5.99:104,6,0
chr10	18628554	.	T	TAC	5115.55	PASS	AB=1.000;AC=27;AF=0.482;AN=56;BaseQRankSum=-0.913;DP=382;FS=0.000;HRun=0;HaplotypeScore=89.7907;InbreedingCoeff=0.8825;MQ=62.11;MQ0=1;MQRankSum=-2.552;QD=27.21;ReadPosRankSum=2.667;VQSLOD=5.9416;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,12:18:18.04:296,18,0	1/1:0,5:6:12.04:198,12,0	0/0:14,0:10:23.66:0,24,296	0/0:18,0:15:29.79:0,30,371	1/1:5,15:20:33.11:544,33,0	0/0:7,0:7:15.03:0,15,173	0/0:8,0:8:21.05:0,21,248	0/0:39,0:38:58.80:0,59,472	0/0:9,0:10:19.47:0,19,209	1/1:0,14:14:42.14:693,42,0	1/1:0,6:6:15.05:247,15,0	0/0:12,0:13:38.94:0,39,451	1/1:2,15:17:42.13:664,42,0	1/1:1,9:10:18.06:297,18,0	0/0:9,0:9:27.09:0,27,337	0/0:13,0:13:36.06:0,36,399	1/1:7,17:23:48.14:755,48,0	0/0:12,0:12:26.99:0,27,298	0/1:27,0:26:6.34:6,0,252	0/0:25,0:25:37.73:0,38,403	0/0:13,0:13:20.75:0,21,145	0/0:5,0:5:15.05:0,15,188	1/1:0,1:1:3.01:49,3,0	1/1:1,8:10:18.06:297,18,0	0/0:8,0:8:12.04:0,12,150	1/1:2,9:11:33:476,33,0	1/1:2,12:14:30.10:494,30,0	1/1:0,8:8:6.02:99,6,0
chr10	18628966	.	AT	A	5189.14	PASS	AB=0.800;AC=25;AF=0.446;AN=56;BaseQRankSum=1.495;DP=493;FS=0.741;HRun=9;HaplotypeScore=112.1919;InbreedingCoeff=0.9076;MQ=62.24;MQ0=0;MQRankSum=-10.454;QD=22.56;ReadPosRankSum=-3.436;VQSLOD=3.0459;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,1:37:65.83:0,66,1011	0/0:13,0:13:36.11:0,36,415	0/1:6,1:8:16.66:17,0,130	0/0:8,0:8:11.86:0,12,113	0/0:27,0:27:63.17:0,63,712	1/1:2,16:18:48.02:439,48,0	1/1:3,21:24:69.02:626,69,0	1/1:7,26:33:84.02:765,84,0	0/0:12,1:13:8.64:0,9,353	0/0:23,0:23:54.16:0,54,623	0/0:10,0:10:30.09:0,30,346	1/1:0,14:14:33.02:302,33,0	0/0:9,0:9:27.07:0,27,302	0/0:18,0:18:45.13:0,45,519	1/1:3,16:19:51.01:462,51,0	1/1:0,13:13:39.02:357,39,0	0/0:17,0:17:39.12:0,39,450	1/1:6,11:17:29.99:274,30,0	1/1:4,11:16:35.04:308,35,0	1/1:3,24:27:72.02:653,72,0	1/1:0,4:4:9:81,9,0	1/1:3,15:18:45.02:412,45,0	0/0:21,0:21:54.16:0,54,623	0/0:15,0:15:41.96:0,42,465	1/1:1,18:19:54.03:494,54,0	0/0:19,0:20:41.96:0,42,465	0/0:17,0:17:36.11:0,36,415	0/0:14,0:14:30.09:0,30,346
chr10	18628984	.	GT	G	10701.13	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=3.048;DP=471;FS=2.540;HRun=7;HaplotypeScore=89.3937;InbreedingCoeff=0.9744;MQ=58.60;MQ0=1;MQRankSum=-5.599;QD=24.60;ReadPosRankSum=4.505;VQSLOD=5.0952;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,30:32:81.17:826,81,0	1/1:0,12:12:33.08:337,33,0	0/0:14,0:14:36.11:0,36,439	0/0:9,0:8:10.28:0,10,85	1/1:1,18:19:51.12:520,51,0	1/1:1,13:14:36.08:367,36,0	1/1:4,19:23:54.12:550,54,0	1/1:13,17:30:57.07:567,57,0	0/0:13,0:13:39.11:0,39,478	1/1:2,15:17:42.06:419,42,0	1/1:0,10:10:24.05:245,24,0	1/1:2,8:10:27.06:275,27,0	1/1:0,10:10:27.06:275,27,0	1/1:0,15:15:39.09:398,39,0	1/1:1,22:23:62.94:642,63,0	1/1:1,14:15:42.09:428,42,0	1/1:1,16:17:42.09:428,42,0	1/1:4,14:18:36.08:367,36,0	1/1:2,14:15:42.05:417,42,0	1/1:3,27:30:69.15:702,69,0	1/1:1,6:7:15.03:153,15,0	1/1:3,14:17:30.06:306,30,0	1/1:4,18:22:51.11:520,51,0	1/1:2,15:17:45.10:459,45,0	1/1:2,17:19:51.12:520,51,0	1/1:3,16:19:48.10:490,48,0	1/1:1,9:10:27.06:275,27,0	1/1:3,10:13:21.05:214,21,0
chr10	18630420	.	AT	A	17046.59	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=3.950;DP=728;FS=14.554;HRun=8;HaplotypeScore=103.7201;InbreedingCoeff=0.9987;MQ=72.03;MQ0=0;MQRankSum=-6.964;QD=25.14;ReadPosRankSum=4.220;VQSLOD=3.7771;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,27:28:75.12:724,75,0	1/1:1,10:11:27.04:261,27,0	0/0:15,0:14:32.86:0,33,349	0/0:17,0:17:26.65:0,27,425	1/1:1,30:31:87.14:840,87,0	1/1:0,20:20:51.08:493,51,0	1/1:3,22:25:63.10:608,63,0	1/1:6,33:39:96.14:921,96,0	0/0:18,0:18:51.15:0,51,606	1/1:4,39:44:99:1158,120,0	1/1:3,26:29:69.10:665,69,0	1/1:1,28:29:75.12:724,75,0	1/1:3,35:38:99:955,99,0	1/1:1,18:19:54.09:521,54,0	1/1:1,21:22:57.09:550,57,0	1/1:6,19:25:54.08:522,54,0	1/1:2,31:33:93.14:892,93,0	1/1:1,14:15:36.05:348,36,0	1/1:4,23:27:66.10:637,66,0	1/1:0,35:35:99:985,102,0	1/1:7,31:38:87.13:840,87,0	1/1:2,20:22:57.08:550,57,0	1/1:3,28:31:75.12:724,75,0	1/1:2,20:22:48.08:463,48,0	1/1:0,24:24:69.11:666,69,0	1/1:1,30:31:90.14:869,90,0	1/1:1,30:31:90.14:869,90,0	1/1:0,9:9:27.04:261,27,0
chr10	18630499	.	CAGATAGATAGATAGATAGATAGAT	C	7851.01	PASS	AC=24;AF=0.444;AN=54;BaseQRankSum=6.707;DP=614;FS=0.999;HRun=0;HaplotypeScore=383.6006;InbreedingCoeff=0.9299;MQ=62.45;MQ0=3;MQRankSum=-2.177;QD=32.99;ReadPosRankSum=1.901;VQSLOD=2.3397;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:22:12.01:237,12,0	1/1:6,2:8:6.02:217,6,0	0/0:21,0:16:18.05:0,18,249	./.	1/1:19,4:23:15:173,15,0	0/0:22,0:22:45.14:0,45,2718	0/0:25,0:25:39.02:0,39,1020	0/0:30,0:30:54.17:0,54,1746	0/0:16,0:33:39.13:0,39,1484	1/1:30,2:32:45.02:1076,45,0	1/1:19,6:25:15.05:338,15,0	0/0:28,0:28:42.12:0,42,2667	1/1:13,9:22:33.11:1516,33,0	1/1:12,4:16:30.05:929,30,0	0/0:22,0:22:33.09:0,33,1998	0/0:31,0:31:60.18:0,60,3158	1/1:24,1:25:13.97:501,14,0	0/0:16,0:16:45.07:0,45,2679	0/0:13,0:13:26.10:0,26,1358	0/0:32,0:32:39.13:0,39,3585	0/0:19,0:19:33.07:0,33,2398	0/0:23,0:23:33.11:0,33,1957	0/0:10,16:26:0:0,0,0	1/1:10,1:11:6.01:72,6,0	0/0:29,0:29:42.12:0,42,2505	1/1:14,3:17:30.08:941,30,0	1/1:20,5:24:39.06:1486,39,0	1/1:11,1:12:18.03:364,18,0
chr10	18630551	.	TAGAC	T	2561.15	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=2.123;DP=585;FS=0.000;HRun=0;HaplotypeScore=165.4506;InbreedingCoeff=0.8674;MQ=63.49;MQ0=9;MQRankSum=0.966;QD=16.21;ReadPosRankSum=4.099;VQSLOD=3.0980;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:32.96:0,33,674	0/0:3,0:3:3.01:0,3,71	0/0:28,0:13:6.45:0,6,384	0/0:42,0:28:17.15:0,17,472	0/0:13,0:13:15.05:0,15,344	1/1:22,0:22:2.49:378,2,0	1/1:10,4:14:21.07:354,21,0	0/0:34,0:33:66.15:0,66,1372	0/0:27,0:27:42.12:0,42,839	0/0:16,0:16:42.28:0,42,851	0/0:16,0:16:14.66:0,15,352	1/1:19,5:24:42.13:689,42,0	0/0:22,0:22:31.69:0,32,456	0/0:16,0:16:32.89:0,33,672	1/1:7,24:31:2.90:51,3,0	1/1:3,22:25:24.08:407,24,0	0/0:29,0:29:38.15:0,38,666	1/1:11,4:15:21.12:315,21,0	0/0:13,0:11:30.10:0,30,678	0/0:32,0:31:75.17:0,75,1639	0/0:20,0:20:51.18:0,51,1194	1/1:2,11:13:9.03:153,9,0	0/0:21,0:21:11.87:0,12,262	0/0:15,0:15:24.08:0,24,488	1/1:11,3:14:22.22:406,22,0	0/0:24,0:24:71.70:0,72,1408	0/0:16,0:16:33.55:0,34,473	0/0:11,0:11:27.09:0,27,568
chr10	18630718	.	TAGAG	T	5734.84	PASS	AB=0.717;AC=37;AF=0.685;AN=54;BaseQRankSum=1.712;DP=363;FS=26.332;HRun=0;HaplotypeScore=120.3743;InbreedingCoeff=0.6742;MQ=60.63;MQ0=1;MQRankSum=-3.342;QD=24.10;ReadPosRankSum=4.410;VQSLOD=2.8473;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,8:12:30.06:466,30,0	1/1:2,3:5:9.03:154,9,0	0/0:18,0:10:15.05:0,15,252	0/0:20,0:13:20.90:0,21,336	1/1:2,11:13:18.06:299,18,0	0/1:4,0:7:0.37:71,0,0	1/1:3,0:10:4.63:76,5,0	0/0:32,0:31:39.75:0,40,513	0/0:20,0:20:51.16:0,51,1107	1/1:3,11:14:36.12:594,36,0	1/1:5,6:11:12.04:198,12,0	1/1:5,0:14:13.63:123,14,0	1/1:1,8:9:21.07:345,21,0	1/1:2,7:9:21.07:355,21,0	1/1:3,0:13:19.78:150,20,0	1/1:1,0:11:17.62:139,18,0	0/1:6,5:11:52.20:288,0,52	0/1:9,0:13:32.16:32,0,69	./.	0/0:6,0:6:12.04:0,12,178	0/0:15,0:15:36.09:0,36,525	1/1:4,0:10:4.30:142,4,0	1/1:7,10:16:36.12:596,36,0	0/0:5,5:9:3.01:0,3,31	1/1:6,0:14:17.63:185,18,0	1/1:4,12:16:39.13:644,39,0	1/1:11,8:19:39.12:613,39,0	1/1:6,4:10:17.09:263,17,0
chr10	18630771	.	GAGAC	G	5610.26	PASS	AB=0.705;AC=43;AF=0.827;AN=52;BaseQRankSum=4.993;DP=268;FS=24.595;HRun=0;HaplotypeScore=108.0786;InbreedingCoeff=0.4151;MQ=43.17;MQ0=14;MQRankSum=-3.058;QD=26.46;ReadPosRankSum=0.600;VQSLOD=2.9958;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:9,3:12:52.85:63,0,53	1/1:0,2:2:5.98:72,6,0	0/0:22,0:6:6.02:0,6,105	0/0:17,0:8:5.99:0,6,62	1/1:5,9:14:9.03:156,9,0	1/1:1,2:3:6.02:104,6,0	1/1:4,5:9:12:176,12,0	1/1:11,11:21:39.13:645,39,0	0/0:11,0:11:30.09:0,30,711	1/1:2,14:16:45.15:781,45,0	1/1:2,7:9:23.95:320,24,0	1/1:0,10:10:17.89:184,18,0	1/1:4,3:7:11.96:145,12,0	1/1:1,7:8:20.90:236,21,0	1/1:3,7:10:20.86:204,21,0	1/1:3,4:7:12.04:209,12,0	1/1:2,1:3:2.50:9,2,0	0/1:3,2:5:46.09:46,0,70	1/1:2,3:4:8.22:144,8,0	1/1:1,12:13:35.90:431,36,0	./.	1/1:2,3:5:8.99:124,9,0	1/1:3,13:15:35.95:497,36,0	./.	1/1:3,10:13:24:353,24,0	0/1:4,8:12:9.72:390,0,10	1/1:4,4:8:15.05:260,15,0	1/1:0,3:3:8.91:61,9,0
chr10	18630794	.	GTA	G	3063.42	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=-4.887;DP=299;FS=9.589;HRun=0;HaplotypeScore=116.7592;InbreedingCoeff=0.6664;MQ=44.90;MQ0=15;MQRankSum=0.797;QD=17.61;ReadPosRankSum=1.777;VQSLOD=3.6881;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,12:15:12.26:329,12,0	1/1:2,1:3:4.56:43,5,0	0/1:16,0:5:3.56:4,0,34	0/0:13,1:6:7.80:0,8,39	1/1:5,7:11:18.05:227,18,0	0/0:5,0:6:3.11:0,3,32	0/1:5,0:6:2.65:3,0,23	0/0:22,0:21:47.35:0,47,312	0/0:10,0:10:26.65:0,27,355	1/1:5,16:19:48.10:580,48,0	1/1:4,11:15:21.07:269,21,0	0/0:12,0:12:13:0,13,43	1/1:4,3:7:15.02:176,15,0	1/1:3,7:9:18.06:227,18,0	0/1:5,0:6:1.72:6,0,2	0/0:6,0:6:10.67:0,11,54	1/1:3,4:7:7.13:166,7,0	0/0:3,0:4:2.19:0,2,7	0/0:4,0:4:3.46:0,3,24	0/0:18,0:19:30.01:0,30,118	0/0:2,0:2:2.68:0,3,11	0/0:9,0:9:9.82:0,10,45	1/1:4,14:18:30.10:382,30,0	1/1:2,2:3:2.94:38,3,0	0/0:16,0:16:29.21:0,29,104	1/1:5,8:13:6.60:327,7,0	1/1:1,12:12:27.03:327,27,0	1/1:3,5:8:12.04:154,12,0
chr10	18630813	.	GAGAGAGAA	G	1374.12	PASS	AB=1.000;AC=18;AF=0.321;AN=56;BaseQRankSum=3.997;DP=313;FS=4.685;HRun=0;HaplotypeScore=138.4941;InbreedingCoeff=0.2602;MQ=57.13;MQ0=6;MQRankSum=-3.931;QD=9.16;ReadPosRankSum=-1.159;VQSLOD=2.4002;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:14,0:14:5.22:5,0,717	0/0:2,0:2:6.02:0,6,203	0/0:17,0:6:2.70:0,3,7	0/0:23,0:13:10.32:0,10,279	0/1:13,0:12:9.38:9,0,595	0/1:7,0:7:7.09:7,0,10	0/0:6,0:6:5.23:0,5,41	1/1:11,15:24:8.23:682,8,0	0/0:10,0:10:12.06:0,12,906	0/0:17,0:15:44.98:0,45,908	0/0:17,0:17:36.12:0,36,1113	0/1:8,0:8:15.39:43,0,15	0/0:8,0:8:24.08:0,24,764	0/0:9,0:8:3.16:0,3,420	1/1:5,0:5:3.90:49,4,0	1/1:4,0:4:3.96:61,4,0	0/0:9,0:9:5.72:0,6,372	0/1:5,0:5:8.15:8,0,16	0/0:2,0:2:0.89:0,1,2	1/1:17,1:18:41.46:494,41,0	1/1:3,0:3:3.01:37,3,0	0/1:8,0:8:7.41:31,0,7	0/1:18,0:18:3.77:4,0,670	0/0:5,0:4:0.46:0,0,1	0/1:21,0:21:1.01:99,0,1	0/0:15,0:15:37.43:0,37,1034	0/0:17,0:16:14.65:0,15,1046	0/0:6,0:6:15.05:0,15,460
chr10	18630817	.	GAGAA	G	3592.28	PASS	AB=0.875;AC=24;AF=0.429;AN=56;BaseQRankSum=0.352;DP=315;FS=9.602;HRun=0;HaplotypeScore=113.3732;InbreedingCoeff=0.7216;MQ=57.24;MQ0=7;MQRankSum=-2.072;QD=30.44;ReadPosRankSum=0.073;VQSLOD=2.9222;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:9.54:0,10,357	0/0:2,0:2:6.02:0,6,110	0/0:17,0:5:0.89:0,1,3	0/0:25,0:13:7.21:0,7,182	0/0:13,0:12:31.14:0,31,398	1/1:1,6:7:15.05:257,15,0	1/1:7,1:8:5.44:56,5,0	1/1:20,3:22:48.03:633,48,0	0/0:11,0:11:30.97:0,31,690	0/0:17,0:15:45.13:0,45,627	0/0:16,0:16:36.12:0,36,656	1/1:1,7:8:18.06:339,18,0	0/0:8,0:8:24.03:0,24,400	0/0:8,0:7:18.90:0,19,220	1/1:4,1:5:9.03:144,9,0	1/1:0,4:4:12.04:227,12,0	0/0:9,0:9:7.88:0,8,185	1/1:5,1:6:14.89:146,15,0	0/1:2,1:3:14:14,0,15	1/1:4,14:18:41.91:699,42,0	1/1:3,0:3:2.98:22,3,0	1/1:0,8:8:17.98:300,18,0	0/0:17,0:17:36.85:0,37,479	0/1:5,0:4:18.77:19,0,25	1/1:2,18:20:39.13:736,39,0	0/0:15,0:15:42.14:0,42,692	0/0:17,0:16:38.05:0,38,615	0/0:8,0:8:7.98:0,8,241
chr10	18630838	.	AGAGAGAAAGC	A	111.91	PASS	AB=0.948;AC=7;AF=0.125;AN=56;BaseQRankSum=4.035;DP=303;FS=0.000;HRun=0;HaplotypeScore=137.9320;InbreedingCoeff=0.3254;MQ=65.89;MQ0=8;MQRankSum=-2.133;QD=2.95;ReadPosRankSum=-2.022;VQSLOD=1.6200;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:12,1:13:52.56:53,0,1227	0/0:2,0:2:6.02:0,6,292	0/0:17,0:8:10.92:0,11,146	0/0:27,0:14:23.24:0,23,368	0/0:11,0:10:27.01:0,27,935	0/0:6,0:6:12.04:0,12,353	0/0:7,0:7:18.06:0,18,483	0/0:32,0:31:79.27:0,79,1612	0/0:9,0:9:27.09:0,27,1205	0/0:12,0:10:21.03:0,21,840	0/0:14,0:14:33.07:0,33,1473	0/0:8,0:8:7.05:0,7,333	0/0:8,0:8:24.08:0,24,1220	0/0:7,0:6:17.98:0,18,591	0/0:3,0:3:9.03:0,9,254	0/0:4,0:4:9.03:0,9,225	0/1:10,1:11:29.47:29,0,540	0/1:7,0:7:16.64:17,0,304	0/0:4,0:4:9.03:0,9,270	0/0:13,0:13:32.85:0,33,669	1/1:0,3:3:8.91:122,9,0	0/0:8,0:8:24.04:0,24,600	0/0:12,0:12:21.03:0,21,898	1/1:3,1:4:2.80:16,3,0	0/0:21,0:21:44.64:0,45,1084	0/0:13,0:13:36.08:0,36,1550	0/0:16,0:15:33.11:0,33,1608	0/0:11,0:11:29.97:0,30,1131
chr10	18630868	.	GAGAC	G	1179.85	PASS	AB=0.885;AC=11;AF=0.212;AN=52;BaseQRankSum=-1.397;DP=247;FS=54.782;HRun=0;HaplotypeScore=78.6279;InbreedingCoeff=0.4324;MQ=56.93;MQ0=15;MQRankSum=-5.234;QD=14.57;ReadPosRankSum=-3.727;VQSLOD=0.0213;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:11,1:12:24.91:25,0,207	./.	./.	0/0:14,0:6:2.62:0,3,11	0/0:9,0:8:12.04:0,12,285	0/0:5,0:5:6.02:0,6,122	0/0:6,0:6:12.04:0,12,297	1/1:9,24:31:62.76:969,63,0	0/0:9,0:9:24.08:0,24,583	0/0:6,0:4:3:0,3,28	0/0:13,0:13:18.05:0,18,394	0/0:4,0:4:9.03:0,9,180	0/0:7,0:7:15.05:0,15,376	0/0:5,0:4:8.96:0,9,166	0/0:3,0:3:6.02:0,6,145	0/0:2,0:2:3:0,3,25	0/1:8,2:10:43.40:43,0,125	0/1:8,1:9:37.02:37,0,289	1/1:2,2:2:6.02:104,6,0	1/1:6,4:9:11.91:112,12,0	1/1:1,2:3:5.93:40,6,0	0/0:7,0:7:18.06:0,18,423	0/0:8,0:8:12.03:0,12,243	0/0:3,1:4:0:0,0,0	0/0:17,0:17:24.06:0,24,530	0/0:9,0:9:24.08:0,24,559	0/0:14,0:13:21.05:0,21,467	0/0:11,0:11:30.10:0,30,730
chr10	18630940	.	AAG	A	952.04	PASS	AB=1.000;AC=22;AF=0.500;AN=44;BaseQRankSum=0.421;DP=143;FS=3.704;HRun=0;HaplotypeScore=43.2345;InbreedingCoeff=0.4720;MQ=68.22;MQ0=8;MQRankSum=0.069;QD=8.82;ReadPosRankSum=1.575;VQSLOD=3.0445;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,4:6:9.02:123,9,0	./.	0/1:31,0:12:0.77:1,0,231	0/1:42,0:14:20.19:20,0,54	1/1:0,1:1:3.01:41,3,0	0/0:1,0:1:0.47:0,0,1	0/0:2,0:2:6.02:0,6,106	0/0:7,0:6:8.82:0,9,113	0/0:3,0:3:9:0,9,128	1/1:0,1:1:3.01:41,3,0	1/1:0,3:3:8.86:96,9,0	0/0:1,0:1:3.01:0,3,53	1/1:0,1:1:3.01:41,3,0	./.	0/0:1,0:1:3.01:0,3,53	./.	1/1:5,5:10:26.99:324,27,0	0/0:7,0:7:12.54:0,13,246	0/0:6,0:5:8.14:0,8,87	0/0:5,0:5:3.01:0,3,37	./.	0/0:1,0:1:3:0,3,27	1/1:1,1:2:3.01:41,3,0	1/1:0,2:2:6.02:82,6,0	./.	1/1:0,2:2:6.02:82,6,0	./.	1/1:1,5:6:15.05:206,15,0
chr10	18630951	.	AGAGAGAGAGAAAGC	A	877.83	PASS	AC=6;AF=0.136;AN=44;BaseQRankSum=-2.766;DP=148;FS=11.262;HRun=0;HaplotypeScore=66.2999;InbreedingCoeff=0.4739;MQ=68.01;MQ0=8;MQRankSum=0.586;QD=35.11;ReadPosRankSum=-1.154;VQSLOD=1.2778;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:6:11.82:0,12,156	./.	0/0:31,0:17:32.22:0,32,475	0/0:44,0:15:17.57:0,18,297	0/0:1,0:1:3.01:0,3,162	0/0:1,0:1:2.97:0,3,20	0/0:2,0:2:6.02:0,6,295	1/1:14,0:11:24.07:486,24,0	0/0:2,0:2:3.01:0,3,97	0/0:1,0:1:3.01:0,3,163	0/0:3,0:3:9.03:0,9,133	0/0:1,0:1:3.01:0,3,111	0/0:1,0:1:3.01:0,3,94	./.	0/0:1,0:1:3.01:0,3,103	./.	0/0:9,0:9:27.09:0,27,835	0/0:7,0:7:21.07:0,21,836	1/1:3,4:6:15.04:398,15,0	1/1:1,3:4:8.98:116,9,0	./.	0/0:1,0:1:3.01:0,3,93	0/0:2,0:2:3.01:0,3,162	0/0:2,0:2:6.02:0,6,230	./.	0/0:2,0:2:6.02:0,6,186	./.	0/0:5,0:5:15.05:0,15,660
chr10	18630989	.	GAGAC	G	317.76	PASS	AC=10;AF=0.263;AN=38;BaseQRankSum=1.578;DP=144;FS=7.023;HRun=0;HaplotypeScore=46.7876;InbreedingCoeff=0.5177;MQ=73.10;MQ0=1;MQRankSum=-2.463;QD=22.70;ReadPosRankSum=1.742;VQSLOD=2.2126;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:6:9.03:0,9,215	./.	0/0:23,0:20:35.57:0,36,697	0/0:23,0:14:9.03:0,9,159	0/0:1,0:1:3.01:0,3,75	0/0:1,1:2:0:0,0,0	1/1:2,1:3:3.01:51,3,0	0/0:40,0:38:87.30:0,87,2076	0/0:1,0:1:3.01:0,3,75	./.	0/0:1,0:1:3.01:0,3,69	1/1:0,1:1:2.97:20,3,0	./.	./.	1/1:0,1:1:3.01:51,3,0	1/1:0,1:1:2.97:20,3,0	0/0:12,0:12:30.08:0,30,695	1/1:0,8:8:21:296,21,0	0/0:5,0:4:3.01:0,3,75	0/0:3,0:3:9.03:0,9,218	0/0:1,0:1:3.01:0,3,75	./.	./.	./.	./.	0/0:2,0:2:6.02:0,6,150	./.	0/0:4,0:4:12.04:0,12,300
chr10	18631483	.	GC	G	4109.91	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=12.497;DP=711;FS=1.256;HRun=2;HaplotypeScore=85.1647;InbreedingCoeff=0.9535;MQ=57.39;MQ0=45;MQRankSum=-0.223;QD=32.36;ReadPosRankSum=0.431;VQSLOD=3.4743;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:49:99:0,135,2023	0/0:3,0:3:9.03:0,9,135	0/0:20,0:3:5.97:0,6,64	0/0:29,0:11:30.08:0,30,407	0/0:23,0:23:63.21:0,63,940	0/0:27,0:27:81.26:0,81,1192	0/0:24,0:24:63.21:0,63,942	1/1:1,30:30:84.25:1063,84,0	0/0:26,0:26:75.25:0,75,1124	0/0:21,0:20:57.19:0,57,851	0/0:10,0:9:20.96:0,21,314	0/0:33,0:33:90.29:0,90,1325	0/0:26,0:25:69.22:0,69,1015	0/0:31,0:31:90.17:0,90,1344	0/0:30,0:30:87.29:0,87,1303	0/0:23,0:23:69.23:0,69,1034	0/0:25,0:25:75.24:0,75,1102	0/0:30,0:30:87.29:0,87,1290	1/1:4,23:20:54.13:671,54,0	1/1:1,15:16:45.15:584,45,0	1/1:1,52:53:99:1792,138,0	0/0:21,0:21:54.17:0,54,788	0/0:10,0:10:24.07:0,24,337	0/0:39,0:39:99:0,117,1754	0/0:16,0:15:45.15:0,45,674	0/0:34,0:31:93.28:0,93,1320	0/0:22,0:22:66.22:0,66,988	0/0:9,0:8:24.08:0,24,360
chr10	18633993	.	CTT	C	13818.65	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-4.095;DP=629;FS=4.204;HRun=11;HaplotypeScore=88.4750;InbreedingCoeff=0.9910;MQ=82.26;MQ0=2;MQRankSum=-5.915;QD=25.08;ReadPosRankSum=4.657;VQSLOD=4.9979;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,31:37:81.17:862,81,0	1/1:0,8:8:24.06:255,24,0	0/0:26,0:23:35.97:0,36,437	0/0:27,0:24:20.04:0,20,493	1/1:4,20:24:57.12:605,57,0	1/1:2,21:23:54.13:575,54,0	1/1:2,14:16:36.08:383,36,0	1/1:11,22:34:67.31:689,67,0	0/0:23,0:22:66.22:0,66,1000	1/1:3,18:21:51.09:543,51,0	1/1:0,22:22:57.12:607,57,0	1/1:2,18:20:51.12:543,51,0	1/1:1,10:11:26.64:286,27,0	1/1:3,12:15:33.07:351,33,0	1/1:1,27:28:72.18:766,72,0	1/1:2,26:28:66.16:703,66,0	1/1:4,15:19:45.10:479,45,0	1/1:2,17:19:42.10:447,42,0	1/1:5,17:22:51.12:543,51,0	1/1:3,20:23:51.07:531,51,0	1/1:4,13:17:30.05:319,30,0	1/1:0,23:23:63.14:671,63,0	1/1:3,21:24:63.13:670,63,0	1/1:4,16:20:45.09:479,45,0	1/1:1,21:22:60.13:639,60,0	1/1:4,22:27:69.12:724,69,0	1/1:4,33:37:93.21:990,93,0	1/1:2,8:10:15.03:160,15,0
chr10	18635959	.	G	GCTCT	21429.96	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-16.784;DP=741;FS=16.296;HRun=0;HaplotypeScore=111.8846;InbreedingCoeff=0.9980;MQ=80.06;MQ0=1;MQRankSum=-5.638;QD=59.53;ReadPosRankSum=5.164;VQSLOD=5.7685;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,70:77:99:4401,166,0	1/1:0,7:7:21.07:556,21,0	0/0:20,0:21:22.27:0,22,528	0/0:17,0:17:32.21:0,32,507	1/1:4,21:25:48.04:1278,48,0	0/0:20,0:19:60.20:0,60,1096	0/0:38,0:38:99:0,105,1864	0/0:27,0:27:78.27:0,78,1447	0/0:27,0:27:75.23:0,75,1365	1/1:2,17:21:57.14:1398,57,0	1/1:0,16:16:36.12:958,36,0	0/0:32,0:32:90.28:0,90,1609	1/1:1,36:39:93.32:2397,93,0	1/1:4,29:35:84.29:2232,84,0	0/0:20,0:20:54.19:0,54,1008	0/0:22,0:22:66.21:0,66,1200	1/1:1,19:21:42.14:1119,42,0	0/0:21,0:21:63.17:0,63,1109	0/0:25,0:24:66.21:0,66,1165	0/0:16,0:16:48.15:0,48,865	0/0:59,0:58:99:0,163,2947	0/0:18,0:18:48.16:0,48,878	1/1:2,10:14:23.94:603,24,0	1/1:1,19:20:21.07:560,21,0	0/0:18,0:18:48.16:0,48,896	1/1:3,35:38:99:2820,108,0	1/1:1,28:30:87.30:2308,87,0	1/1:0,17:16:30.10:800,30,0
chr10	18636228	.	TAA	T	11809.54	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-3.816;DP=614;FS=1.254;HRun=12;HaplotypeScore=87.3973;InbreedingCoeff=0.9887;MQ=74.66;MQ0=2;MQRankSum=-0.577;QD=21.63;ReadPosRankSum=5.935;VQSLOD=4.4701;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,20:22:51.10:519,51,0	1/1:0,9:9:21.02:214,21,0	0/0:29,0:24:27.60:0,28,421	0/0:20,0:19:15.49:0,15,248	1/1:5,20:26:59.79:582,60,0	1/1:3,19:22:25.37:380,25,0	1/1:1,13:14:27.05:275,27,0	1/1:4,30:35:75.79:741,76,0	0/0:16,0:18:47.63:0,48,657	1/1:9,21:30:36.80:568,37,0	1/1:3,18:21:39.04:397,39,0	1/1:3,22:25:60.12:610,60,0	1/1:3,19:22:57.12:580,57,0	1/1:1,21:21:51.11:518,51,0	1/1:5,19:24:54.08:549,54,0	1/1:5,8:13:21.01:213,21,0	1/1:1,21:23:53.83:601,54,0	1/1:1,14:17:41.57:390,42,0	1/1:3,18:21:54.10:548,54,0	1/1:4,22:26:57.04:567,57,0	1/1:3,15:19:36.07:366,36,0	1/1:2,11:13:27.02:275,27,0	1/1:3,25:28:69.14:702,69,0	1/1:5,27:32:69.14:702,69,0	1/1:3,14:17:24.04:244,24,0	1/1:6,22:30:68.57:657,69,0	1/1:2,17:21:33.91:371,34,0	1/1:0,13:13:24.05:244,24,0
chr10	18637718	.	TTA	T	14770.37	PASS	AC=52;AF=1.000;AN=52;DP=349;FS=0.000;HRun=0;HaplotypeScore=135.8490;InbreedingCoeff=-0.0053;MQ=28.94;MQ0=0;QD=42.32;VQSLOD=6.0733;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,25:25:72.20:1090,72,0	1/1:0,8:8:24.08:373,24,0	./.	./.	1/1:1,22:23:50.84:734,51,0	1/1:0,2:2:6.02:94,6,0	1/1:0,14:14:42.06:600,42,0	1/1:0,10:10:30.10:459,30,0	1/1:0,15:15:45.15:701,45,0	1/1:0,25:25:75.25:1141,75,0	1/1:0,12:12:32.98:456,33,0	1/1:0,14:14:42.14:653,42,0	1/1:0,11:11:33.11:514,33,0	1/1:0,11:11:33.11:511,33,0	1/1:1,20:21:63.13:927,63,0	1/1:0,11:11:33.11:514,33,0	1/1:0,13:13:30.05:438,30,0	1/1:0,8:8:21.03:301,21,0	1/1:1,13:14:42.01:599,42,0	1/1:1,5:6:17.99:251,18,0	1/1:0,8:8:21.07:326,21,0	1/1:2,11:13:36.04:502,36,0	1/1:0,14:14:42.10:626,42,0	1/1:0,7:6:14.96:180,15,0	1/1:2,23:25:75.10:1085,75,0	1/1:2,19:21:63.13:924,63,0	1/1:1,9:10:29.79:405,30,0	1/1:1,7:8:24.08:367,24,0
chr10	18637738	.	TG	T	12075.10	PASS	AC=54;AF=1.000;AN=54;DP=403;FS=0.000;HRun=3;HaplotypeScore=160.6797;InbreedingCoeff=-0.0074;MQ=32.66;MQ0=0;QD=29.96;VQSLOD=3.8012;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,25:29:60.19:734,60,0	1/1:0,7:7:18.06:223,18,0	1/1:0,1:1:3.01:37,3,0	./.	1/1:1,19:20:39.07:482,39,0	1/1:2,6:8:18.06:218,18,0	1/1:5,16:21:45.07:553,45,0	1/1:0,11:11:33.10:409,33,0	1/1:2,18:20:57.18:697,57,0	1/1:3,24:27:72.22:884,72,0	1/1:1,10:11:27.08:333,27,0	1/1:1,16:17:51.16:618,51,0	1/1:0,10:10:30.09:371,30,0	1/1:3,8:11:24.07:296,24,0	1/1:3,19:22:54.15:649,54,0	1/1:1,12:13:36.11:446,36,0	1/1:3,11:14:33.10:408,33,0	1/1:1,12:13:36.09:432,36,0	1/1:3,13:16:39.12:483,39,0	1/1:0,7:7:21.07:260,21,0	1/1:2,12:14:21.07:259,21,0	1/1:2,15:17:33.09:395,33,0	1/1:0,13:13:33.10:408,33,0	1/1:2,9:10:15:165,15,0	1/1:3,27:30:78.24:961,78,0	1/1:2,19:21:57.18:705,57,0	1/1:3,9:12:33.09:390,33,0	1/1:0,7:7:21.07:260,21,0
chr10	18640210	.	T	TACAC	19398.37	PASS	AB=0.765;AC=47;AF=0.870;AN=54;BaseQRankSum=-1.392;DP=638;FS=12.613;HRun=0;HaplotypeScore=162.5388;InbreedingCoeff=0.8788;MQ=52.28;MQ0=6;MQRankSum=-4.464;QD=35.46;ReadPosRankSum=2.759;VQSLOD=4.5947;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,43:50:99:2599,102,0	1/1:4,0:11:21.96:377,22,0	0/0:32,0:25:54.96:0,55,969	0/0:32,0:16:15.46:0,15,407	0/1:9,0:13:0:0,0,0	1/1:7,15:20:24.06:615,24,0	1/1:6,28:36:60.68:1541,61,0	1/1:6,0:29:60.13:1085,60,0	0/0:19,0:19:51.17:0,51,896	1/1:8,0:25:57.17:965,57,0	./.	1/1:4,20:25:39.13:999,39,0	1/1:2,0:16:33.11:584,33,0	1/1:10,0:20:24.08:439,24,0	1/1:1,17:20:33.11:845,33,0	1/1:1,12:14:18.06:461,18,0	1/1:8,1:23:35.47:550,35,0	1/1:10,21:30:35.82:1435,36,0	1/1:4,0:18:45.15:896,45,0	1/1:5,0:17:30.10:597,30,0	1/1:2,0:30:41.47:848,41,0	1/1:7,18:25:41.93:1010,42,0	1/1:6,0:17:5.89:81,6,0	1/1:11,1:30:12.04:214,12,0	1/1:4,18:23:45.15:1125,45,0	1/1:8,0:27:75.25:1304,75,0	1/1:9,0:19:36.12:668,36,0	1/1:0,0:3:9.03:160,9,0
chr10	18640293	.	G	GCA	1407.36	PASS	AB=0.956;AC=40;AF=0.909;AN=44;BaseQRankSum=2.237;DP=564;FS=1.263;HRun=0;HaplotypeScore=144.0255;InbreedingCoeff=0.2519;MQ=48.18;MQ0=15;MQRankSum=-1.913;QD=2.93;ReadPosRankSum=-1.502;VQSLOD=2.6181;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:37,4:37:93.65:316,0,94	1/1:7,0:7:8.33:38,8,0	./.	./.	1/1:22,0:21:2.87:15,3,0	1/1:26,0:24:11.65:84,12,0	1/1:32,0:32:5.29:31,5,0	1/1:25,0:24:24.32:187,24,0	0/0:21,0:21:15.04:0,15,163	1/1:18,0:18:14.59:104,15,0	./.	0/1:23,0:23:0.93:19,0,1	1/1:10,0:10:2.49:9,2,0	1/1:25,0:25:8.15:35,8,0	1/1:15,0:15:2.49:6,2,0	1/1:16,0:16:7.93:25,8,0	1/1:24,0:23:2.88:15,3,0	1/1:15,0:15:2.04:7,2,0	1/1:18,0:18:15.24:103,15,0	1/1:15,0:15:8.98:73,9,0	1/1:58,0:55:27.37:288,27,0	./.	./.	1/1:30,0:30:2.27:6,2,0	1/1:20,0:20:1.42:5,1,0	1/1:25,0:25:15.82:133,16,0	1/1:16,0:15:3.35:15,3,0	./.
chr10	18640333	.	ACAAGCCCTACAT	A	5849.54	PASS	AB=1.000;AC=35;AF=0.673;AN=52;BaseQRankSum=9.848;DP=575;FS=7.820;HRun=0;HaplotypeScore=191.6126;InbreedingCoeff=0.6809;MQ=52.44;MQ0=12;MQRankSum=-8.111;QD=15.27;ReadPosRankSum=1.909;VQSLOD=3.0838;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:36:83.13:0,83,4156	1/1:7,0:7:9.03:169,9,0	0/0:21,0:15:45.05:0,45,2068	0/0:28,0:19:51.12:0,51,2208	1/1:11,15:26:2.16:46,2,0	1/1:21,0:20:8.98:183,9,0	1/1:31,0:31:11.57:371,12,0	0/0:31,0:29:59.62:0,60,2701	0/0:19,0:18:45.15:0,45,2507	1/1:22,0:21:51.13:1455,51,0	./.	1/1:23,0:23:15.05:394,15,0	1/1:9,0:9:5.55:147,6,0	1/1:20,0:20:9.50:169,10,0	1/1:16,0:16:9:153,9,0	1/1:16,0:16:11.51:158,12,0	1/1:20,0:19:6.02:153,6,0	1/1:9,0:9:15.05:446,15,0	0/0:24,0:23:23.64:0,24,1943	0/0:12,0:12:4.04:0,4,1153	0/1:57,0:55:6.15:6,0,4507	./.	0/1:16,0:16:0:0,0,0	0/1:26,0:26:0.02:0,0,1	1/1:19,0:19:6.01:131,6,0	1/1:27,0:27:51.11:1505,51,0	1/1:12,0:11:9.03:259,9,0	1/1:6,0:6:3.01:104,3,0
chr10	18640334	.	CAAGCCCT	C	4842.79	PASS	AB=0.945;AC=36;AF=0.692;AN=52;BaseQRankSum=7.790;DP=568;FS=19.062;HRun=0;HaplotypeScore=160.7797;InbreedingCoeff=0.6068;MQ=54.48;MQ0=11;MQRankSum=-8.066;QD=12.39;ReadPosRankSum=0.069;VQSLOD=2.9397;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:35:65.40:0,65,2888	1/1:4,3:7:9.03:226,9,0	0/0:20,0:15:42.14:0,42,1540	0/0:31,0:22:59.27:0,59,1910	1/1:23,3:26:2.41:75,2,0	1/1:19,2:20:15:211,15,0	1/1:30,2:32:11.70:262,12,0	0/0:30,0:29:49.12:0,49,1972	0/0:17,0:16:45.15:0,45,1732	1/1:20,3:22:51.16:1038,51,0	./.	1/1:21,2:23:15.05:331,15,0	1/1:8,1:9:6.02:134,6,0	1/1:14,5:19:8.83:223,9,0	1/1:14,2:16:9.03:180,9,0	1/1:14,2:16:12.04:255,12,0	1/1:19,1:19:6.02:140,6,0	1/1:9,0:9:15.05:312,15,0	0/0:24,0:23:5.53:0,6,1344	0/1:12,0:12:5.25:5,0,794	0/1:54,0:53:84.25:84,0,3148	./.	0/1:15,1:16:0:0,0,0	0/1:21,5:26:0.02:0,0,0	1/1:19,1:20:6.02:123,6,0	1/1:26,1:27:59.20:976,59,0	1/1:9,1:9:9.03:203,9,0	1/1:5,0:5:3.01:63,3,0
chr10	18640335	.	AAGCCCTACAT	A	6960.15	PASS	AB=0.753;AC=39;AF=0.696;AN=56;BaseQRankSum=8.163;DP=459;FS=16.384;HRun=0;HaplotypeScore=148.3222;InbreedingCoeff=0.5220;MQ=59.96;MQ0=13;MQRankSum=-7.039;QD=20.90;ReadPosRankSum=0.728;VQSLOD=3.3656;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:33:37.27:0,37,3902	1/1:3,4:7:9.03:270,9,0	0/0:22,0:16:48.06:0,48,2215	0/0:31,0:22:59.23:0,59,2607	1/1:19,1:20:2.55:73,3,0	1/1:6,4:11:15:290,15,0	1/1:3,14:18:11.78:408,12,0	0/0:22,0:21:58.13:0,58,2691	0/0:17,0:16:45.15:0,45,2396	1/1:4,17:20:51.16:1559,51,0	0/1:1,3:5:0:0,0,0	1/1:2,10:16:15.05:484,15,0	1/1:1,6:7:6.02:173,6,0	1/1:5,9:14:9.03:246,9,0	1/1:2,8:14:9.03:205,9,0	1/1:3,6:14:11.65:255,12,0	1/1:2,14:16:6.02:179,6,0	1/1:1,6:8:15.05:472,15,0	0/1:18,0:17:4.55:5,0,1871	0/1:8,0:8:19.87:20,0,1102	0/1:50,0:49:99:141,0,4384	0/1:2,5:8:0:0,0,0	0/1:2,11:13:0:0,0,0	0/1:6,12:18:0.18:0,0,0	1/1:1,9:14:6.02:157,6,0	1/1:1,18:19:57.13:1635,57,0	1/1:1,6:6:9.03:285,9,0	1/1:1,4:4:3.01:104,3,0
chr10	18640338	.	CCCT	C	1863.42	PASS	AB=0.963;AC=35;AF=0.673;AN=52;BaseQRankSum=11.540;DP=440;FS=4.119;HRun=0;HaplotypeScore=124.3390;InbreedingCoeff=0.6252;MQ=61.72;MQ0=13;MQRankSum=-8.784;QD=7.70;ReadPosRankSum=1.253;VQSLOD=3.0628;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:81.17:0,81,1936	1/1:7,0:7:9.01:100,9,0	0/0:22,0:16:44.64:0,45,1025	0/0:32,0:23:60.20:0,60,1367	1/1:19,0:19:2.89:23,3,0	1/1:8,1:8:8.99:88,9,0	1/1:16,1:17:12.01:112,12,0	0/0:20,0:19:54.15:0,54,1265	0/0:16,0:15:45.15:0,45,1103	1/1:21,0:20:45.49:415,45,0	./.	1/1:12,4:16:14.99:148,15,0	1/1:7,0:7:5.99:51,6,0	1/1:14,0:14:8.97:72,9,0	1/1:10,4:14:9.02:102,9,0	1/1:9,6:14:12.04:152,12,0	1/1:15,0:15:6:52,6,0	1/1:7,1:8:15.01:145,15,0	0/0:16,0:15:1.58:0,2,906	0/1:8,0:8:19.68:20,0,494	0/0:46,0:46:2.67:0,3,2045	0/1:7,1:8:0:0,0,0	./.	0/1:17,0:17:0.16:0,0,0	1/1:10,4:14:5.98:65,6,0	1/1:20,0:19:47.79:389,48,0	1/1:7,0:6:8.99:76,9,0	1/1:6,0:4:3:25,3,0
chr10	18640344	.	AT	A	1968.75	PASS	AB=0.773;AC=33;AF=0.660;AN=50;BaseQRankSum=11.510;DP=439;FS=0.000;HRun=1;HaplotypeScore=113.2909;InbreedingCoeff=0.7971;MQ=67.90;MQ0=9;MQRankSum=-10.459;QD=8.63;ReadPosRankSum=2.216;VQSLOD=1.1281;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:78.27:0,78,1243	1/1:4,3:7:9.03:113,9,0	0/0:23,0:20:35.78:0,36,768	0/0:31,0:25:66.15:0,66,988	1/1:16,3:19:2.62:36,3,0	1/1:5,4:8:9.02:102,9,0	1/1:14,3:17:12.01:114,12,0	0/0:22,0:21:63.19:0,63,964	0/0:16,0:16:48.15:0,48,743	1/1:17,3:20:45:426,45,0	./.	1/1:10,6:16:14.82:142,15,0	1/1:6,1:7:6.01:59,6,0	1/1:9,5:14:8.88:106,9,0	1/1:8,6:14:9.02:100,9,0	1/1:6,9:14:12.04:153,12,0	1/1:14,1:15:6.01:64,6,0	1/1:6,2:8:15.01:158,15,0	0/0:19,0:19:51.16:0,51,792	0/0:8,0:8:21.07:0,21,335	0/0:41,0:41:92.98:0,93,1477	./.	./.	0/1:12,5:17:0.18:0,0,0	1/1:9,5:14:5.75:64,6,0	1/1:18,2:19:44.98:404,45,0	1/1:6,1:6:9:89,9,0	1/1:4,2:4:3:25,3,0
chr10	18641035	.	C	CCT	1494.96	PASS	AB=0.555;AC=13;AF=0.232;AN=56;BaseQRankSum=-2.093;DP=620;FS=1.225;HRun=0;HaplotypeScore=108.0182;InbreedingCoeff=0.4060;MQ=76.19;MQ0=2;MQRankSum=0.271;QD=7.87;ReadPosRankSum=2.410;VQSLOD=3.1416;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,105,1554	0/0:5,0:10:20.56:0,21,174	0/0:27,0:24:32.35:0,32,475	0/0:17,0:12:7.94:0,8,217	0/0:8,0:37:57.09:0,57,364	1/1:1,0:26:26.39:336,26,0	1/1:2,0:20:18.05:253,18,0	0/0:36,0:39:99:0,114,1474	0/0:10,0:10:30.09:0,30,424	0/0:7,0:27:27.55:0,28,255	0/0:7,0:23:13.01:0,13,212	1/1:1,0:19:5.81:158,6,0	0/0:6,0:19:34.07:0,34,203	0/1:5,0:24:12.17:12,0,139	0/1:2,0:14:19.39:127,0,19	1/1:2,0:22:1.86:222,2,0	0/0:3,0:22:39.34:0,39,174	0/1:7,0:23:99:211,0,108	0/0:22,0:23:59.31:0,59,736	0/0:28,0:28:84:0,84,1016	0/0:12,0:12:36.09:0,36,508	0/1:4,1:22:81.96:198,0,82	0/0:6,0:20:36.16:0,36,225	0/0:3,0:20:30.22:0,30,144	0/1:3,1:19:59.64:142,0,60	0/0:6,0:23:16.52:0,17,186	0/0:1,0:14:21.30:0,21,84	0/0:7,0:17:19.52:0,20,192
chr10	18641599	.	GT	G	10705.86	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=1.474;DP=588;FS=11.325;HRun=9;HaplotypeScore=71.6572;InbreedingCoeff=0.9566;MQ=72.63;MQ0=2;MQRankSum=-3.775;QD=21.33;ReadPosRankSum=4.020;VQSLOD=5.1044;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:81.21:0,81,908	1/1:1,6:7:15.01:137,15,0	0/0:28,0:19:23.33:0,23,244	0/0:25,0:16:7.59:0,8,149	1/1:5,25:30:68.99:623,69,0	1/1:2,20:22:45.02:412,45,0	1/1:1,13:14:30.01:275,30,0	1/1:4,25:29:72.03:659,72,0	1/1:4,8:12:23.99:220,24,0	1/1:2,16:18:48.03:438,48,0	1/1:0,15:15:39.02:355,39,0	1/1:0,11:11:27.01:247,27,0	1/1:2,8:10:18.01:165,18,0	1/1:0,9:9:18.01:165,18,0	1/1:0,22:22:63.03:577,63,0	1/1:3,9:12:24:220,24,0	1/1:2,34:36:84.52:770,85,0	1/1:3,29:32:69.03:632,69,0	1/1:4,28:32:86.98:783,87,0	1/1:1,22:23:62.98:568,63,0	1/1:1,19:20:48.02:439,48,0	1/1:1,18:19:38.93:340,39,0	1/1:2,10:12:26.94:247,27,0	1/1:1,18:19:39.02:357,39,0	1/1:2,30:32:69.03:631,69,0	1/1:3,23:26:66.02:600,66,0	1/1:2,12:14:27.01:247,27,0	1/1:2,24:26:66.03:601,66,0
chr10	18646636	.	G	GT	6733.69	PASS	AB=1.000;AC=25;AF=0.446;AN=56;BaseQRankSum=-11.226;DP=574;FS=4.019;HRun=8;HaplotypeScore=75.1086;InbreedingCoeff=0.9292;MQ=69.18;MQ0=0;MQRankSum=-2.288;QD=25.51;ReadPosRankSum=1.521;VQSLOD=5.7651;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:16,1:17:10.44:0,10,350	0/0:11,0:11:27.01:0,27,247	0/0:19,0:15:24.22:0,24,253	0/1:19,0:9:7.61:8,0,31	0/0:28,0:28:74.99:0,75,675	1/1:1,19:20:54.16:623,54,0	1/1:2,16:18:17.67:457,18,0	1/1:14,12:27:56.98:617,57,0	0/0:18,0:18:48.02:0,48,439	0/0:24,0:24:66.02:0,66,601	0/0:25,0:25:75.03:0,75,681	1/1:3,19:22:54.16:621,54,0	0/0:18,0:18:42.02:0,42,384	0/0:14,0:14:35.99:0,36,323	1/1:3,16:19:42.12:485,42,0	1/1:3,24:27:69.20:796,69,0	0/0:20,0:20:22.80:0,23,313	1/1:4,14:18:36.11:415,36,0	1/1:9,10:19:42.12:483,42,0	1/1:6,24:30:84.22:948,84,0	1/1:1,6:7:18.05:208,18,0	1/1:1,16:17:45.13:518,45,0	0/0:17,0:18:47.06:0,47,417	0/0:15,0:15:32.96:0,33,294	1/1:4,17:21:48.14:554,48,0	0/0:30,0:30:81.04:0,81,741	0/0:28,0:28:54.01:0,54,494	0/0:24,0:23:69.02:0,69,627
chr10	18646659	.	A	AT	9128.89	PASS	AB=0.947;AC=33;AF=0.589;AN=56;BaseQRankSum=-11.792;DP=587;FS=2.004;HRun=9;HaplotypeScore=77.1984;InbreedingCoeff=0.8997;MQ=70.99;MQ0=1;MQRankSum=-1.194;QD=24.67;ReadPosRankSum=-1.247;VQSLOD=5.0752;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:56.98:0,57,495	1/1:0,6:6:18.05:199,18,0	0/1:17,0:15:16.12:16,0,62	0/0:22,0:12:3.63:0,4,33	1/1:5,27:32:34.91:786,35,0	0/0:23,0:23:52:0,52,523	0/0:19,0:19:47.95:0,48,412	1/1:9,17:26:69.11:714,69,0	0/0:16,0:16:38.94:0,39,330	1/1:3,21:24:63.15:686,63,0	1/1:3,24:27:72.07:767,72,0	0/0:20,0:20:44.93:0,45,382	1/1:2,13:15:36.10:396,36,0	1/1:1,15:16:39.11:431,39,0	0/0:16,0:16:38.99:0,39,338	0/0:26,0:26:68.94:0,69,590	1/1:2,19:21:42.11:465,42,0	0/0:15,0:15:29.93:0,30,249	1/1:8,19:27:60:626,60,0	1/1:7,27:34:63.55:910,64,0	1/1:2,4:6:12.03:130,12,0	0/0:18,0:18:43.53:0,44,364	1/1:2,14:16:36.10:398,36,0	1/1:3,12:15:41.88:434,42,0	0/0:20,0:20:50.91:0,51,431	1/1:5,26:32:78.04:844,78,0	1/1:4,28:31:60.16:664,60,0	1/1:3,20:22:40.14:662,40,0
chr10	18647541	.	T	TTGC	3152.03	PASS	AC=30;AF=0.556;AN=54;BaseQRankSum=-0.230;DP=588;FS=5.512;HRun=0;HaplotypeScore=95.5450;InbreedingCoeff=0.7417;MQ=68.39;MQ0=6;MQRankSum=-0.334;QD=10.72;ReadPosRankSum=-0.241;VQSLOD=2.8812;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:35:11.80:0,12,120	1/1:2,7:9:6.02:120,6,0	0/0:26,0:18:15.02:0,15,174	0/0:19,0:16:21.05:0,21,264	1/1:16,0:16:3.01:51,3,0	0/0:20,0:18:14.92:0,15,151	0/0:42,0:42:68.80:0,69,899	0/0:9,0:19:5.73:0,6,23	1/1:8,17:25:12.04:234,12,0	1/1:13,0:13:1.25:3,1,0	1/1:8,0:8:3:25,3,0	0/0:33,0:33:72.17:0,72,957	1/1:9,18:27:24.08:473,24,0	1/1:12,24:33:21.07:401,21,0	0/0:20,0:20:36.09:0,36,470	0/0:14,0:13:17.85:0,18,224	1/1:10,24:34:7.92:270,8,0	0/0:31,0:31:54.17:0,54,731	1/1:4,0:9:2.63:25,3,0	0/0:5,0:11:0:0,0,1	1/1:12,0:35:0.55:22,1,0	./.	1/1:8,0:8:6.01:71,6,0	1/1:34,3:37:35.89:1125,36,0	0/0:11,0:11:9.02:0,9,109	1/1:12,2:14:12.02:190,12,0	1/1:6,8:15:9.03:178,9,0	1/1:5,0:5:12.03:156,12,0
chr10	18647562	.	CTGT	C	666.72	PASS	AB=0.987;AC=16;AF=0.296;AN=54;BaseQRankSum=5.642;DP=503;FS=9.206;HRun=0;HaplotypeScore=87.7858;InbreedingCoeff=-0.1402;MQ=52.83;MQ0=13;MQRankSum=-3.071;QD=2.47;ReadPosRankSum=-1.932;VQSLOD=0.7861;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:12:9.79:0,10,198	0/0:7,0:7:6.36:0,6,38	0/0:12,0:7:15.01:0,15,194	0/0:12,0:9:14.21:0,14,268	0/1:5,0:5:0.85:19,0,1	0/0:8,0:6:14.91:0,15,163	0/0:50,0:49:60.83:0,61,1264	0/1:14,0:11:28.15:110,0,28	0/0:24,0:24:17.91:0,18,197	0/1:10,0:10:7.24:7,0,47	0/1:3,0:3:16.11:16,0,25	0/0:39,0:39:74.84:0,75,1144	0/1:30,1:29:34.02:34,0,130	0/1:33,3:32:86.67:87,0,88	0/0:19,0:19:36.09:0,36,674	0/1:17,0:16:5.24:5,0,329	0/1:32,0:32:32.51:50,0,33	0/0:26,0:25:44.26:0,44,1033	0/1:9,0:6:0.35:39,0,0	1/1:7,0:7:5.85:35,6,0	0/1:48,0:41:42.65:60,0,43	./.	0/1:7,0:5:7.73:38,0,8	0/1:35,3:38:99:262,0,123	0/0:5,0:4:8.77:0,9,82	0/1:8,0:8:13.53:14,0,56	0/0:15,0:14:8.71:0,9,73	0/1:5,0:5:39.47:44,0,39
chr10	18647577	.	TTGC	T	924.25	PASS	AB=1.000;AC=19;AF=0.679;AN=28;BaseQRankSum=-0.442;DP=441;FS=0.000;HRun=0;HaplotypeScore=74.7240;InbreedingCoeff=0.5174;MQ=46.78;MQ0=20;MQRankSum=1.150;QD=3.39;ReadPosRankSum=1.214;VQSLOD=1.5700;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	./.	./.	1/1:25,26:50:6.02:81,6,0	0/0:13,0:10:5.99:0,6,53	0/0:22,0:21:20.11:0,20,246	./.	./.	1/1:18,17:35:10.27:111,10,0	1/1:30,0:28:23.65:166,24,0	1/1:30,0:26:14.37:92,14,0	1/1:10,9:19:3.01:31,3,0	1/1:7,11:17:5.81:54,6,0	1/1:25,0:25:3.86:89,4,0	1/1:12,13:24:18.06:242,18,0	0/0:9,0:5:0.89:0,1,2	./.	0/0:46,0:31:6.49:0,6,84	./.	./.	0/1:29,0:29:14.42:93,0,14	./.	./.	1/1:11,0:10:11.13:82,11,0	./.
chr10	18647703	.	GTGC	G	650.79	PASS	AB=1.000;AC=14;AF=0.389;AN=36;BaseQRankSum=-0.435;DP=385;FS=0.000;HRun=0;HaplotypeScore=66.1017;InbreedingCoeff=0.4448;MQ=44.27;MQ0=25;MQRankSum=-1.387;QD=3.74;ReadPosRankSum=-1.930;VQSLOD=0.6577;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	1/1:3,0:3:3.01:35,3,0	0/1:33,0:6:15.19:15,0,31	0/0:34,0:7:7.27:0,7,93	./.	./.	1/1:17,28:45:8.99:122,9,0	./.	./.	0/0:5,0:3:0:0,0,0	0/0:3,0:3:2.98:0,3,21	1/1:6,16:22:17.99:225,18,0	0/0:7,0:9:4.17:0,4,45	0/1:20,0:22:12.80:13,0,84	1/1:3,14:17:11.99:156,12,0	1/1:3,2:5:9:107,9,0	0/0:16,0:16:19.06:0,19,171	1/1:12,11:22:9:108,9,0	0/0:5,0:5:3.43:0,3,20	./.	0/0:44,0:28:0.43:0,0,1	./.	./.	0/0:38,0:48:32.08:0,32,331	0/0:8,0:5:0:0,0,0	./.	0/0:6,0:6:5.23:0,5,38	./.
chr10	18647751	.	CTGCTGG	C	241.60	PASS	AB=0.972;AC=11;AF=0.324;AN=34;BaseQRankSum=-2.908;DP=194;FS=13.960;HRun=0;HaplotypeScore=67.5815;InbreedingCoeff=-0.1686;MQ=55.55;MQ0=15;MQRankSum=4.122;QD=1.68;ReadPosRankSum=-1.441;VQSLOD=-0.0028;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	0/0:1,0:1:0.89:0,1,2	0/1:13,0:4:2.91:3,0,20	0/1:26,0:8:6.16:6,0,197	./.	./.	1/1:13,0:13:2.07:16,2,0	./.	0/0:5,0:5:14.95:0,15,151	./.	./.	0/0:10,0:10:3.01:0,3,50	0/1:4,1:5:17.79:49,0,18	0/0:12,1:11:2.97:0,3,14	0/1:9,0:9:27.97:28,0,28	0/0:2,0:2:3.44:0,3,21	0/1:9,0:9:11.22:11,0,55	0/1:10,0:9:36.91:58,0,37	./.	./.	0/1:23,0:9:0:0,0,0	0/0:3,0:1:3.01:0,3,48	./.	0/1:30,3:33:38.49:167,0,38	0/1:3,0:2:0:0,0,0	./.	0/0:3,0:3:0.42:0,0,1	./.
chr10	18647792	.	GCTC	G	83.95	PASS	AB=0.941;AC=6;AF=0.130;AN=46;BaseQRankSum=3.404;DP=309;FS=0.000;HRun=0;HaplotypeScore=54.8031;InbreedingCoeff=0.0357;MQ=43.45;MQ0=29;MQRankSum=-3.998;QD=0.87;ReadPosRankSum=1.484;VQSLOD=1.2171;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:4:5.93:0,6,64	0/0:5,0:4:8.54:0,9,51	0/0:13,0:1:2.50:0,2,9	0/0:21,0:5:0.49:0,0,17	./.	0/0:7,0:3:8.67:0,9,60	0/0:20,0:19:52.07:0,52,646	0/1:6,0:4:11.28:11,0,20	1/1:3,0:7:14.42:108,14,0	0/0:4,0:1:2.96:0,3,19	./.	0/0:10,0:10:14.88:0,15,129	0/1:13,2:13:41.69:42,0,289	0/0:15,0:14:18.67:0,19,199	0/0:15,0:15:3.01:0,3,54	0/0:9,0:9:11.24:0,11,147	0/1:13,2:14:26.56:27,0,543	0/0:11,0:11:15.13:0,15,397	0/0:8,0:2:5.03:0,5,29	./.	0/1:52,0:25:11.82:12,0,21	0/0:2,0:2:3:0,3,26	./.	0/0:32,1:33:43.88:0,44,969	0/0:5,0:4:8.94:0,9,68	0/0:8,0:3:5.34:0,5,28	0/0:2,0:2:3.01:0,3,69	./.
chr10	18647794	.	TCCTGC	T	105.13	PASS	AC=2;AF=0.043;AN=46;BaseQRankSum=3.334;DP=323;FS=0.000;HRun=0;HaplotypeScore=64.4066;InbreedingCoeff=0.3498;MQ=41.56;MQ0=29;MQRankSum=-2.596;QD=13.14;ReadPosRankSum=2.119;VQSLOD=2.4193;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:7:15.05:0,15,284	0/0:5,0:4:9.03:0,9,172	0/0:13,0:2:2.84:0,3,28	0/0:21,0:5:9.18:0,9,99	./.	0/0:7,0:3:9.03:0,9,176	0/0:21,0:20:57.20:0,57,1391	0/0:6,0:4:9.03:0,9,140	1/1:3,5:7:15.49:192,15,0	0/0:5,0:2:3.01:0,3,56	./.	0/0:12,0:12:14.95:0,15,342	0/0:15,0:13:31.78:0,32,645	0/0:17,0:16:26.30:0,26,535	0/0:15,0:15:3.01:0,3,92	0/0:9,0:9:11.25:0,11,245	0/0:15,0:14:38.84:0,39,1002	0/0:11,0:11:30.10:0,30,752	0/0:9,0:2:6.02:0,6,107	./.	0/0:53,0:26:8.29:0,8,76	0/0:4,0:4:6.02:0,6,103	./.	0/0:33,0:33:60.09:0,60,1701	0/0:6,0:5:12.04:0,12,248	0/0:8,0:3:6.02:0,6,102	0/0:3,0:3:3.01:0,3,100	./.
chr10	18647828	.	GCTGCTGCTGCTC	G	2752.48	PASS	AB=1.000;AC=14;AF=0.333;AN=42;BaseQRankSum=-2.071;DP=394;FS=9.188;HRun=0;HaplotypeScore=124.4931;InbreedingCoeff=0.4436;MQ=47.06;MQ0=21;MQRankSum=-1.533;QD=15.73;ReadPosRankSum=-0.999;VQSLOD=1.7496;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:8:0.47:0,0,1	0/0:4,0:3:2.88:0,3,15	0/1:17,0:4:0.92:1,0,17	0/0:18,0:6:8.80:0,9,56	./.	./.	1/1:34,0:32:60.09:870,60,0	0/0:3,0:3:6.02:0,6,133	0/0:9,0:9:1.76:0,2,16	0/1:6,0:5:0:0,0,0	./.	1/1:26,0:26:47.74:801,48,0	0/1:22,0:22:10.82:11,0,294	0/0:26,0:23:4.38:0,4,233	1/1:1,16:17:12.04:207,12,0	1/1:4,11:14:9.03:219,9,0	0/1:24,0:23:24.87:25,0,514	1/1:14,0:14:33.11:760,33,0	0/0:8,0:6:8.85:0,9,71	0/0:6,0:6:3:0,3,25	0/0:44,0:34:42.52:0,43,820	./.	./.	0/0:47,0:47:53.98:0,54,1094	./.	0/0:16,0:12:6:0,6,53	0/0:5,0:5:2.91:0,3,23	./.
chr10	18647837	.	GCTC	G	747.19	PASS	AB=0.953;AC=12;AF=0.273;AN=44;BaseQRankSum=6.554;DP=389;FS=2.535;HRun=0;HaplotypeScore=101.6309;InbreedingCoeff=-0.3036;MQ=49.55;MQ0=14;MQRankSum=-3.660;QD=2.93;ReadPosRankSum=-3.912;VQSLOD=1.0437;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:4:2.99:0,3,24	0/1:4,0:3:0.90:1,0,22	0/0:15,0:4:5.55:0,6,83	0/0:20,0:8:3.79:0,4,122	0/0:3,0:2:3.01:0,3,52	./.	0/1:37,0:36:99:111,0,477	0/0:4,0:3:9.02:0,9,152	0/1:12,0:12:0.42:51,0,0	0/0:7,0:4:0.61:0,1,24	./.	0/1:28,0:27:99:133,0,183	0/1:19,1:20:91.74:92,0,325	0/1:28,0:26:99:105,0,261	0/1:17,0:17:1.22:57,0,1	0/1:13,0:12:9.14:44,0,9	0/1:24,2:25:99:100,0,461	0/1:14,0:14:99:108,0,275	0/0:5,0:5:2.59:0,3,111	0/0:3,0:3:6.01:0,6,93	0/0:44,0:38:76.44:0,76,1014	./.	./.	0/1:46,1:47:49.99:50,0,965	./.	0/0:14,0:9:20.96:0,21,245	0/1:2,6:8:18.77:19,0,61	./.
chr10	18652039	.	GTT	G	4538.24	PASS	AB=0.561;AC=19;AF=0.339;AN=56;BaseQRankSum=3.274;DP=690;FS=4.509;HRun=13;HaplotypeScore=98.0603;InbreedingCoeff=0.7592;MQ=73.55;MQ0=0;MQRankSum=-2.878;QD=16.50;ReadPosRankSum=5.596;VQSLOD=4.1202;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:39:72.87:0,73,265	0/0:8,0:8:14.54:0,15,182	0/0:17,0:17:40.62:0,41,415	0/0:20,0:19:30.69:0,31,290	0/0:29,0:30:71.67:0,72,920	1/1:3,15:18:39.04:378,39,0	1/1:5,18:23:51.04:495,51,0	0/0:7,1:29:24.60:0,25,163	0/1:2,3:29:24.33:24,0,121	0/0:26,0:29:78.22:0,78,1039	0/0:16,0:16:42.13:0,42,589	1/1:3,20:24:53.82:506,54,0	0/0:27,0:29:80.73:0,81,1084	0/0:19,0:19:48.10:0,48,605	1/1:1,27:30:59.67:614,60,0	1/1:4,19:23:51.04:494,51,0	0/0:31,0:32:81.22:0,81,1114	1/1:3,25:30:65.76:671,66,0	0/1:8,1:19:20.52:21,0,80	0/0:4,0:17:35.44:0,35,137	0/1:2,2:17:24.74:25,0,61	1/1:5,27:33:69.43:670,69,0	0/0:14,0:14:30.07:0,30,396	0/0:23,0:26:64.63:0,65,828	1/1:4,24:29:68.74:640,69,0	0/0:38,0:40:99:0,111,1488	0/0:28,0:30:74.73:0,75,1032	0/0:17,0:17:42.14:0,42,608
chr10	18654268	.	T	TA	8683.22	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-15.126;DP=614;FS=7.709;HRun=8;HaplotypeScore=53.4753;InbreedingCoeff=0.9988;MQ=68.18;MQ0=0;MQRankSum=-0.174;QD=29.94;ReadPosRankSum=2.565;VQSLOD=4.9338;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:56.99:0,57,513	1/1:1,8:9:21.06:242,21,0	0/0:13,0:14:28.63:0,29,238	0/0:19,0:19:22.40:0,22,348	1/1:2,28:30:35.25:885,35,0	0/0:32,0:32:84.04:0,84,769	0/0:14,0:15:44.06:0,44,390	0/0:27,0:27:59.99:0,60,538	0/0:22,0:22:57.02:0,57,522	1/1:4,30:34:87.25:994,87,0	1/1:3,22:25:69.20:795,69,0	0/0:21,0:21:60.01:0,60,544	1/1:5,20:25:57.17:658,57,0	1/1:3,25:28:81.21:914,81,0	0/0:22,0:22:51.01:0,51,467	0/0:21,0:21:63.03:0,63,577	1/1:1,19:20:54.16:623,54,0	0/0:11,0:11:30.02:0,30,275	0/0:27,0:27:72.03:0,72,656	0/0:21,0:21:57.03:0,57,522	0/0:14,0:14:36:0,36,324	0/0:18,0:18:45.02:0,45,412	1/1:2,23:25:66.20:762,66,0	1/1:1,18:19:48.14:554,48,0	0/0:20,0:20:60.01:0,60,544	1/1:3,21:24:63.19:727,63,0	1/1:5,30:35:65.81:1011,66,0	1/1:0,16:16:45.13:519,45,0
chr10	18655621	.	GGAGGAAGAGGAGGAGCAGAGGAGGAGCAGGAA	G	1457.07	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=0.198;DP=723;FS=23.055;HRun=0;HaplotypeScore=509.2423;InbreedingCoeff=0.8771;MQ=63.17;MQ0=4;MQRankSum=-4.112;QD=18.21;ReadPosRankSum=-2.097;VQSLOD=-0.2537;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,126,7535	0/0:8,0:8:12.04:0,12,777	0/0:28,0:16:3.01:0,3,50	0/0:56,0:43:37.69:0,38,862	0/0:23,0:23:48.11:0,48,2220	0/0:18,0:18:18.14:0,18,2501	0/0:29,0:29:42.11:0,42,1634	1/1:20,0:20:10.23:123,10,0	0/0:30,0:30:63.19:0,63,5672	0/0:21,0:21:33.11:0,33,2897	0/0:13,0:13:33.04:0,33,1761	0/0:26,0:26:48.13:0,48,3218	0/0:26,0:26:57.16:0,57,4474	0/0:28,0:28:69.21:0,69,4842	0/0:27,0:27:45.15:0,45,3538	0/0:23,0:23:33.10:0,33,2406	0/0:22,0:22:45.02:0,45,3795	0/0:30,0:30:45.07:0,45,3024	1/1:7,8:13:21.03:706,21,0	1/1:8,20:28:2.97:20,3,0	1/1:17,0:17:29.71:755,30,0	0/0:27,0:27:48.16:0,48,3357	0/0:22,0:22:51.14:0,51,4360	0/0:44,0:44:90.26:0,90,7100	0/0:26,0:26:39.11:0,39,2704	0/0:28,0:28:45.15:0,45,3144	0/0:27,0:27:60.21:0,60,5657	0/0:12,0:12:27.02:0,27,2127
chr10	18655647	.	GCAGGAA	G	600.28	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=7.357;DP=690;FS=16.713;HRun=0;HaplotypeScore=159.4270;InbreedingCoeff=0.9385;MQ=60.23;MQ0=2;MQRankSum=-3.478;QD=10.72;ReadPosRankSum=-2.273;VQSLOD=1.4542;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:58:99:0,174,4531	0/0:7,0:7:21.06:0,21,590	0/0:21,0:9:12.90:0,13,303	0/0:34,0:23:23.40:0,23,611	0/0:21,0:21:63.04:0,63,1554	0/0:21,0:22:51.15:0,51,1696	0/0:28,0:28:78.06:0,78,1962	1/1:0,11:11:32.88:274,33,0	0/0:31,0:31:93.27:0,93,2900	0/0:19,0:19:57.20:0,57,1920	0/0:15,0:15:45:0,45,1097	0/0:31,0:31:87.23:0,87,2681	0/0:21,0:21:63.15:0,63,1879	0/0:31,0:31:93.22:0,93,2749	0/0:29,0:29:75.22:0,75,2421	0/0:20,0:20:42.12:0,42,1362	0/0:18,0:18:54.08:0,54,1501	0/0:27,0:27:66.08:0,66,1864	1/1:8,0:7:18.77:142,19,0	1/1:20,0:20:2.97:20,3,0	1/1:15,0:17:33.41:314,33,0	0/0:31,0:31:77.95:0,78,2397	0/0:26,0:26:78.22:0,78,2436	0/0:44,0:44:99:0,127,3745	0/0:29,0:29:69.15:0,69,2115	0/0:25,0:25:69.22:0,69,1957	0/0:27,0:27:81.18:0,81,2564	0/0:13,0:13:39.06:0,39,1208
chr10	18655652	.	A	AGC	282.14	PASS	AB=0.874;AC=3;AF=0.056;AN=54;BaseQRankSum=6.185;DP=700;FS=3.484;HRun=0;HaplotypeScore=118.7708;InbreedingCoeff=-0.0511;MQ=60.75;MQ0=4;MQRankSum=-4.319;QD=7.63;ReadPosRankSum=0.757;VQSLOD=3.3759;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:56:99:0,169,2655	0/0:7,0:7:21.07:0,21,343	0/0:26,0:11:19.42:0,19,389	0/0:37,0:22:43.24:0,43,633	0/0:20,0:20:60.14:0,60,892	0/0:24,0:24:54.18:0,54,878	0/0:28,0:28:72.16:0,72,1117	0/1:11,0:11:1.84:2,0,152	0/0:29,0:29:87.30:0,87,1410	0/0:22,0:22:63.21:0,63,1005	0/0:16,0:16:42.13:0,42,654	0/0:31,0:31:81.28:0,81,1319	0/0:20,0:20:57.19:0,57,922	0/0:30,0:30:87.29:0,87,1387	0/0:31,0:31:81.22:0,81,1284	0/0:22,0:22:45.13:0,45,686	0/0:18,0:18:54.18:0,54,853	0/0:26,0:26:63.21:0,63,999	0/1:8,0:7:58.59:134,0,59	./.	0/1:7,11:18:99:236,0,99	0/0:32,0:32:81.17:0,81,1247	0/0:26,0:26:75.26:0,75,1222	0/0:44,0:44:99:0,129,2056	0/0:27,0:27:66.23:0,66,1080	0/0:22,0:22:66.23:0,66,1076	0/0:31,0:31:93.22:0,93,1390	0/0:18,0:18:51.14:0,51,780
chr10	18655670	.	A	AGAG	7216.03	PASS	AB=0.776;AC=16;AF=0.286;AN=56;BaseQRankSum=-13.253;DP=706;FS=1.718;HRun=0;HaplotypeScore=103.6002;InbreedingCoeff=0.8216;MQ=63.70;MQ0=8;MQRankSum=-0.315;QD=26.93;ReadPosRankSum=5.366;VQSLOD=5.1000;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,102,1466	0/0:6,0:6:12.04:0,12,176	0/0:32,0:15:32.09:0,32,363	0/1:33,0:18:12.59:13,0,187	0/0:13,0:13:27.08:0,27,378	1/1:5,20:26:39.13:798,39,0	1/1:7,22:28:48.16:955,48,0	0/0:21,0:21:54.14:0,54,750	0/0:29,0:29:72.24:0,72,1050	0/0:22,0:22:63.21:0,63,917	0/0:17,0:17:36.11:0,36,507	1/1:9,23:34:60.21:1235,60,0	0/0:19,0:19:48.14:0,48,679	0/0:22,0:22:54.17:0,54,768	1/1:7,27:35:57.20:1162,57,0	0/1:8,15:23:19.84:402,0,20	0/0:18,0:18:41.99:0,42,548	1/1:5,18:23:20.14:725,20,0	0/0:16,0:14:26.75:0,27,344	0/0:26,0:25:15.05:0,15,220	0/0:21,0:21:45.13:0,45,628	1/1:6,27:33:51.17:1005,51,0	0/0:27,0:27:75.19:0,75,1035	0/0:46,0:46:99:0,115,1628	1/1:3,26:30:44.97:921,45,0	0/0:16,0:16:39.13:0,39,560	0/0:31,0:31:77.26:0,77,1176	0/0:16,0:16:45.11:0,45,630
chr10	18655886	.	TACACACACAC	T	3033.69	PASS	AB=0.788;AC=21;AF=0.420;AN=50;BaseQRankSum=4.349;DP=612;FS=11.445;HRun=0;HaplotypeScore=212.4417;InbreedingCoeff=0.6892;MQ=66.33;MQ0=1;MQRankSum=-7.180;QD=10.21;ReadPosRankSum=-2.038;VQSLOD=1.2933;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:31:12.02:222,12,0	0/0:6,0:10:6.02:0,6,110	./.	./.	0/0:8,0:10:11.91:0,12,186	1/1:12,14:27:18.53:496,19,0	1/1:17,5:23:5.89:144,6,0	0/1:40,0:40:0.31:0,0,0	0/0:13,0:27:28.05:0,28,304	0/0:15,0:16:27.98:0,28,971	0/0:10,0:12:24.04:0,24,764	1/1:14,15:29:15.05:443,15,0	0/0:11,0:23:25.22:0,25,457	0/0:13,0:24:23.94:0,24,346	1/1:11,20:33:24.06:583,24,0	0/1:7,4:22:37.67:320,0,38	0/0:19,0:27:32.67:0,33,512	0/1:14,0:20:14.23:14,0,125	1/1:10,0:10:2.06:35,2,0	1/1:16,0:16:15.04:270,15,0	./.	1/1:6,8:16:8.78:247,9,0	0/0:5,0:7:21.07:0,21,385	0/0:17,0:23:18.01:0,18,284	1/1:8,22:30:15.99:444,16,0	0/0:28,0:31:60.15:0,60,1140	0/0:21,0:25:18.53:0,19,331	0/0:5,0:9:4.18:0,4,124
chr10	18655924	.	CACACACACACACAG	C	1939.80	PASS	AB=1.000;AC=12;AF=0.214;AN=56;BaseQRankSum=6.020;DP=865;FS=10.683;HRun=0;HaplotypeScore=333.4608;InbreedingCoeff=0.5454;MQ=51.59;MQ0=15;MQRankSum=-4.152;QD=8.08;ReadPosRankSum=1.984;VQSLOD=0.8749;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:38,0:38:99:132,0,304	0/0:10,0:10:18.05:0,18,474	0/0:38,0:10:23.14:0,23,233	0/0:28,0:12:32.32:0,32,261	0/0:28,0:28:56.97:0,57,1439	0/1:32,0:30:42.54:43,0,331	0/0:26,0:26:2.28:0,2,559	1/1:14,17:30:64.14:544,64,0	0/0:39,0:38:72.58:0,73,1613	0/0:31,0:31:93.13:0,93,2465	0/0:20,0:20:51.08:0,51,1461	0/0:37,0:37:29.67:0,30,403	0/0:44,0:44:97.84:0,98,2479	0/0:39,0:39:75:0,75,1415	0/1:45,0:45:53.35:53,0,449	0/0:25,0:25:39.19:0,39,466	0/0:36,0:36:82.91:0,83,1950	0/0:23,0:23:46.16:0,46,560	1/1:13,0:13:30.67:346,31,0	1/1:18,4:22:41.95:762,42,0	1/1:28,0:27:28.29:219,28,0	0/1:31,0:31:15.41:15,0,348	0/0:23,0:23:60.11:0,60,1685	0/0:42,0:42:69.23:0,69,1884	0/0:40,0:40:18.19:0,18,419	0/0:46,0:46:99:0,135,3130	0/0:27,0:27:72.57:0,73,1744	0/0:23,0:23:44.20:0,44,1362
chr10	18656050	.	AC	A	5749.88	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=12.047;DP=1104;FS=3.333;HRun=1;HaplotypeScore=125.4685;InbreedingCoeff=0.9994;MQ=56.65;MQ0=2;MQRankSum=-0.511;QD=37.34;ReadPosRankSum=-1.469;VQSLOD=4.1606;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,108,1690	0/0:8,0:8:24.08:0,24,383	0/0:51,0:34:93.15:0,93,1450	0/0:29,0:20:53.74:0,54,820	0/0:36,0:36:99:0,108,1669	0/0:26,0:26:66.23:0,66,1055	0/0:40,0:40:99:0,108,1721	1/1:0,38:38:99:1576,114,0	0/0:48,0:48:99:0,132,2049	0/0:48,0:48:99:0,141,2243	0/0:28,0:28:84.27:0,84,1308	0/0:54,0:54:99:0,137,2160	0/0:61,0:61:99:0,184,2892	0/0:46,0:46:99:0,129,2057	0/0:59,0:59:99:0,144,2268	0/0:54,0:54:99:0,147,2325	0/0:26,0:26:69.22:0,69,1080	0/0:29,0:29:84.29:0,84,1331	1/1:1,20:20:57.18:781,57,0	1/1:0,29:29:81.18:1089,81,0	1/1:1,65:65:99:2305,165,0	0/0:34,0:34:99:0,102,1599	0/0:35,0:35:99:0,105,1645	0/0:37,0:37:99:0,108,1659	0/0:48,0:48:99:0,141,2204	0/0:45,0:44:99:0,126,1973	0/0:41,0:41:99:0,123,1916	0/0:25,0:25:72.25:0,72,1145
chr10	18656968	.	A	AAGGC	8448.63	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-13.838;DP=743;FS=0.774;HRun=0;HaplotypeScore=156.8652;InbreedingCoeff=0.9892;MQ=86.85;MQ0=1;MQRankSum=-5.867;QD=57.47;ReadPosRankSum=-3.554;VQSLOD=5.2601;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,159,2746	0/0:7,0:7:18.05:0,18,298	0/0:24,0:24:52.40:0,52,866	0/0:34,0:34:87.06:0,87,1349	0/0:26,0:26:66.20:0,66,1142	0/0:20,0:20:57.18:0,57,1006	0/0:26,0:26:75.23:0,75,1305	1/1:4,29:38:99:2202,99,0	0/0:28,0:28:78.26:0,78,1386	0/0:26,0:26:72.24:0,72,1281	0/0:13,0:13:39.12:0,39,679	0/0:24,0:24:69.24:0,69,1254	0/0:25,0:25:72.25:0,72,1299	0/0:24,0:24:63.18:0,63,1058	0/0:41,0:41:99:0,111,1925	0/0:19,0:19:54.19:0,54,982	0/0:21,0:21:48.16:0,48,873	0/0:22,0:22:57.17:0,57,1004	1/1:6,19:26:60.19:1426,60,0	1/1:2,25:27:75.26:1960,75,0	1/1:4,50:55:99:2861,111,0	0/0:24,0:24:66.23:0,66,1183	0/0:16,0:16:48.16:0,48,869	0/0:38,0:38:99:0,108,1930	0/0:23,0:23:66.23:0,66,1184	0/0:25,0:25:66.23:0,66,1200	0/0:31,0:31:90.31:0,90,1602	0/0:4,0:4:12.04:0,12,218
chr10	18661837	.	C	CA	65	PASS	AB=0.894;AC=8;AF=0.174;AN=46;BaseQRankSum=4.270;DP=106;FS=4.649;HRun=0;HaplotypeScore=51.7211;InbreedingCoeff=0.1065;MQ=69.44;MQ0=0;MQRankSum=-3.503;QD=2.95;ReadPosRankSum=1.220;VQSLOD=2.2950;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:4:12.04:0,12,167	1/1:1,0:1:2.68:11,3,0	0/0:11,0:11:26.65:0,27,374	0/0:11,0:9:29.99:0,30,394	0/0:9,1:10:2.68:0,3,42	0/0:6,1:7:11.57:0,12,206	0/0:2,0:2:3.01:0,3,42	0/1:4,0:4:26.99:27,0,114	0/1:4,0:4:0.56:1,0,75	0/1:5,2:7:42.15:42,0,168	0/0:1,1:2:1.55:0,2,4	0/0:4,0:4:9.03:0,9,131	1/1:0,2:2:6.02:75,6,0	0/0:1,0:1:3.01:0,3,42	0/0:6,0:6:18.06:0,18,251	0/0:1,0:1:3.01:0,3,42	./.	./.	0/0:5,0:5:12.04:0,12,168	0/0:1,0:1:2.97:0,3,20	0/0:4,0:3:2.89:0,3,42	./.	0/0:5,1:6:5.81:0,6,62	./.	0/0:4,0:4:7.27:0,7,86	0/1:3,1:4:21.72:22,0,75	0/0:3,0:3:7.94:0,8,45	./.
chr10	18661839	.	C	CCAT	181.97	PASS	AB=0.825;AC=10;AF=0.217;AN=46;BaseQRankSum=5.091;DP=108;FS=4.601;HRun=0;HaplotypeScore=56.9601;InbreedingCoeff=0.0300;MQ=72.98;MQ0=0;MQRankSum=-4.290;QD=5.69;ReadPosRankSum=2.563;VQSLOD=1.5328;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:4:12.04:0,12,212	0/0:1,0:1:2.94:0,3,18	0/0:11,0:11:1.26:0,1,398	0/0:12,0:9:30.05:0,30,481	0/0:9,1:10:2.20:0,2,37	0/0:6,1:7:0.06:0,0,231	0/0:2,0:2:3.01:0,3,53	0/0:3,0:3:9.03:0,9,159	0/1:5,0:5:7.16:7,0,97	0/1:5,2:7:88.27:88,0,240	1/1:1,1:2:2.98:21,3,0	0/0:4,0:4:9.03:0,9,151	1/1:0,2:2:6.02:121,6,0	0/0:1,0:1:3.01:0,3,53	0/0:6,0:6:18.06:0,18,317	0/0:1,0:1:3.01:0,3,53	./.	./.	0/0:5,0:5:12.04:0,12,212	./.	0/0:4,0:3:3.01:0,3,53	0/1:0,1:1:0:0,0,0	0/1:6,1:7:14.14:14,0,80	./.	0/0:4,0:4:6.02:0,6,106	0/1:3,1:4:42.97:43,0,133	0/1:4,0:4:1.67:2,0,47	./.
chr10	18661853	.	TATCTATCC	T	728.74	PASS	AB=0.830;AC=10;AF=0.208;AN=48;BaseQRankSum=2.713;DP=122;FS=3.502;HRun=0;HaplotypeScore=69.3135;InbreedingCoeff=0.1690;MQ=76.88;MQ0=1;MQRankSum=-3.276;QD=21.43;ReadPosRankSum=-0.149;VQSLOD=2.4202;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:6:18.06:0,18,705	0/0:1,0:1:3.01:0,3,42	0/0:14,0:11:3.55:0,4,504	0/0:14,0:12:27.09:0,27,1165	0/0:7,2:9:0.47:0,0,1	0/0:8,0:8:16.87:0,17,523	0/0:2,0:2:3.01:0,3,77	0/0:3,0:3:6.02:0,6,236	0/1:4,1:5:34.37:99,0,34	0/1:7,2:9:87.43:329,0,87	0/0:1,0:1:2.94:0,3,18	0/0:5,0:5:13.29:0,13,473	0/0:3,0:3:6.02:0,6,91	1/1:1,0:1:3.01:50,3,0	0/0:6,0:6:17.99:0,18,572	0/0:2,0:2:6.02:0,6,262	./.	0/0:1,0:1:3.01:0,3,112	0/0:4,0:4:9.03:0,9,372	./.	0/0:5,0:4:3.01:0,3,131	0/0:3,0:3:3.43:0,3,19	1/1:8,0:8:2.77:205,3,0	./.	0/1:4,0:4:0.08:0,0,262	1/1:3,0:3:5.97:81,6,0	0/1:2,2:4:13.50:84,0,13	./.
chr10	18661858	.	AT	A	401.74	PASS	AB=0.922;AC=19;AF=0.396;AN=48;BaseQRankSum=6.700;DP=121;FS=15.725;HRun=1;HaplotypeScore=59.3214;InbreedingCoeff=0.2785;MQ=75.07;MQ0=2;MQRankSum=-4.674;QD=7.88;ReadPosRankSum=2.975;VQSLOD=-0.6289;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:6:18.06:0,18,287	1/1:1,0:1:3.01:44,3,0	0/0:13,0:10:26.67:0,27,360	0/0:12,0:10:29.59:0,30,441	0/0:7,1:8:0:0,0,0	0/1:7,1:8:11.54:12,0,221	0/0:3,0:3:4.26:0,4,51	0/0:3,0:3:9.03:0,9,141	0/1:4,1:5:8.46:81,0,8	1/1:5,3:8:21.08:168,21,0	1/1:0,1:1:3.01:33,3,0	0/1:5,0:5:12.35:12,0,135	1/1:1,2:3:6.02:83,6,0	1/1:1,0:1:2.22:7,2,0	0/0:7,0:7:18.06:0,18,276	0/0:2,0:2:6.02:0,6,96	./.	0/0:1,0:1:3.01:0,3,48	0/0:4,0:3:9.03:0,9,144	./.	0/0:5,0:4:3.01:0,3,48	1/1:2,1:3:1.35:4,1,0	0/1:7,1:8:14.87:50,0,15	./.	0/0:5,0:5:2.15:0,2,105	1/1:1,1:2:5.05:48,5,0	0/1:6,0:6:2.79:3,0,31	./.
chr10	18661861	.	CATCT	C	646.25	PASS	AB=0.854;AC=11;AF=0.229;AN=48;BaseQRankSum=4.384;DP=117;FS=7.581;HRun=0;HaplotypeScore=63.5487;InbreedingCoeff=0.3359;MQ=74.64;MQ0=2;MQRankSum=-4.175;QD=19.01;ReadPosRankSum=1.284;VQSLOD=1.8296;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:6:18.06:0,18,442	0/0:1,0:1:3:0,3,29	0/0:11,0:8:18.92:0,19,331	0/0:12,0:10:29.13:0,29,744	0/0:3,4:7:0.47:0,0,1	0/0:7,0:7:0.97:0,1,320	0/0:4,0:4:3.90:0,4,60	0/0:3,0:3:9.03:0,9,181	0/1:4,1:5:14.11:87,0,14	0/1:5,3:8:21.13:240,0,21	0/0:1,0:1:1.25:0,1,3	0/0:5,0:5:3.62:0,4,279	0/0:3,0:3:6.01:0,6,74	1/1:0,1:1:3.01:60,3,0	0/0:7,0:7:18.06:0,18,379	0/0:2,0:2:6.02:0,6,168	./.	0/0:1,0:1:3.01:0,3,59	0/0:4,0:3:9.03:0,9,223	./.	0/0:5,0:4:3.01:0,3,84	0/0:3,0:3:2.22:0,2,7	1/1:2,6:8:16.96:190,17,0	./.	0/1:5,0:5:0.04:0,0,178	1/1:1,1:2:6.02:93,6,0	1/1:5,0:5:9.70:109,10,0	./.
chr10	18661879	.	C	CCCAT	3502.07	PASS	AB=0.778;AC=45;AF=0.865;AN=52;BaseQRankSum=3.645;DP=201;FS=5.929;HRun=0;HaplotypeScore=137.7315;InbreedingCoeff=0.5165;MQ=55.03;MQ0=2;MQRankSum=-5.007;QD=22.45;ReadPosRankSum=0.914;VQSLOD=3.2809;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:17.40:0,17,291	1/1:3,0:3:3.01:37,3,0	0/0:13,0:11:24.06:0,24,346	0/0:15,0:13:15.41:0,15,392	./.	1/1:8,2:10:13.18:233,13,0	1/1:5,1:6:5.94:89,6,0	1/1:8,2:10:21.06:398,21,0	1/1:6,0:6:11.72:133,12,0	1/1:10,1:12:21.07:392,21,0	1/1:4,0:4:0.47:1,0,0	1/1:5,1:7:15.05:291,15,0	1/1:6,0:6:8.85:56,9,0	1/1:6,0:6:15.05:222,15,0	1/1:9,0:10:17.91:228,18,0	1/1:4,0:4:9.02:118,9,0	1/1:4,1:5:6.02:113,6,0	1/1:2,0:2:3.01:63,3,0	1/1:5,1:5:15:269,15,0	1/1:4,2:6:2.95:56,3,0	1/1:11,4:14:4.35:75,4,0	1/1:3,1:4:2.74:12,3,0	1/1:11,0:11:15.01:240,15,0	1/1:3,1:4:9.03:156,9,0	0/1:5,2:7:6.50:118,0,7	1/1:6,0:6:11.93:148,12,0	1/1:6,0:6:5.93:54,6,0	./.
chr10	18661904	.	C	CT	859.71	PASS	AB=1.000;AC=49;AF=0.907;AN=54;BaseQRankSum=6.737;DP=253;FS=1.243;HRun=0;HaplotypeScore=160.6468;InbreedingCoeff=0.1617;MQ=48.68;MQ0=2;MQRankSum=-8.060;QD=3.67;ReadPosRankSum=2.332;VQSLOD=3.5644;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:12,0:12:7.70:46,8,0	1/1:2,0:2:2.94:18,3,0	0/0:19,0:14:25.78:0,26,186	0/1:24,0:16:59.78:60,0,150	1/1:10,0:10:5.42:24,5,0	1/1:11,1:12:7.12:41,7,0	1/1:5,0:5:8.17:35,8,0	0/1:17,0:17:20.12:20,0,46	1/1:5,0:5:11.70:62,12,0	1/1:8,1:9:11.88:51,12,0	1/1:2,3:5:2.21:8,2,0	1/1:6,0:6:13.71:60,14,0	1/1:5,0:5:10.98:47,11,0	1/1:6,0:6:16.43:72,16,0	1/1:6,0:6:13.82:62,14,0	1/1:4,0:4:8.23:36,8,0	1/1:9,0:9:9.39:37,9,0	1/1:1,0:1:2.50:9,2,0	1/1:12,0:11:8.89:44,9,0	1/1:11,0:11:7.89:32,8,0	0/1:24,0:23:10.11:18,0,10	1/1:2,0:3:1.82:5,2,0	1/1:12,1:13:8:37,8,0	1/1:9,0:9:11.27:54,11,0	1/1:9,2:11:7.35:49,7,0	1/1:7,1:8:12.62:49,13,0	1/1:4,0:4:2.97:10,3,0	./.
chr10	18661934	.	TCCATCCATCCATCCATCCATCCATC	T	8644.37	PASS	AB=0.716;AC=29;AF=0.537;AN=54;BaseQRankSum=3.640;DP=259;FS=2.532;HRun=0;HaplotypeScore=190.3263;InbreedingCoeff=0.1069;MQ=39.61;MQ0=12;MQRankSum=-6.263;QD=64.03;ReadPosRankSum=2.662;VQSLOD=4.4980;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:25:6.10:6,0,1233	0/1:1,1:2:26.05:193,0,26	0/0:12,0:2:4.83:0,5,89	0/0:25,0:5:9.02:0,9,142	0/1:2,4:6:8.49:37,0,8	0/1:4,5:9:99:301,0,199	1/1:4,0:4:8.91:61,9,0	0/0:15,0:15:41.77:0,42,1392	1/1:1,3:4:12.04:607,12,0	0/1:3,3:5:40.86:592,0,41	0/1:3,1:4:2.67:14,0,3	0/1:3,3:6:30.36:652,0,30	0/1:3,3:6:50.43:651,0,50	1/1:0,5:5:15.05:1001,15,0	1/1:0,5:5:15.05:1001,15,0	1/1:1,3:4:12.04:738,12,0	1/1:4,3:7:18.53:737,19,0	1/1:2,0:2:6.02:144,6,0	0/0:17,0:16:44.85:0,45,2041	0/0:15,0:15:20.43:0,20,609	0/0:36,0:34:39.59:0,40,1987	0/0:2,1:3:2.60:0,3,42	0/1:6,4:10:65.37:298,0,65	1/1:6,3:9:2.87:416,3,0	0/1:6,3:9:99:128,0,230	0/1:4,3:7:99:623,0,134	1/1:2,3:5:9.03:443,9,0	./.
chr10	18661944	.	C	CACT	1058.22	PASS	AB=0.962;AC=14;AF=0.259;AN=54;BaseQRankSum=7.211;DP=338;FS=10.989;HRun=0;HaplotypeScore=172.0981;InbreedingCoeff=-0.1048;MQ=42.49;MQ0=12;MQRankSum=-5.650;QD=9.12;ReadPosRankSum=4.825;VQSLOD=2.5687;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:33.11:0,33,555	1/1:4,0:4:0.45:65,0,0	0/0:15,0:6:12.03:0,12,178	0/0:27,0:8:20.79:0,21,279	0/0:12,0:12:9.19:0,9,113	0/1:13,0:13:34.25:34,0,257	0/0:11,0:11:11.73:0,12,175	0/0:19,0:19:51.11:0,51,772	0/1:6,0:6:71.52:72,0,123	0/1:9,0:8:42.91:43,0,271	0/0:6,0:6:2.33:0,2,54	0/1:8,0:8:77.51:105,0,78	0/1:9,0:9:11.32:11,0,225	0/1:11,0:11:72.85:173,0,73	1/1:12,0:12:15.04:224,15,0	0/1:6,1:7:74.38:162,0,74	0/1:10,3:13:99:123,0,196	0/0:8,0:8:21.07:0,21,338	0/0:16,0:14:40.38:0,40,655	0/0:16,0:16:24.08:0,24,420	0/0:34,0:32:58.86:0,59,969	0/0:3,0:3:2.99:0,3,24	0/0:11,1:12:13.16:0,13,105	0/1:13,1:14:99:159,0,136	0/1:10,0:10:39.23:39,0,203	0/0:10,0:10:1.04:0,1,292	0/0:8,0:8:11.94:0,12,129	./.
chr10	18662094	.	T	TA	20431.81	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-9.957;DP=598;FS=15.906;HRun=0;HaplotypeScore=56.9116;InbreedingCoeff=0.9902;MQ=98.37;MQ0=0;MQRankSum=-10.072;QD=42.13;ReadPosRankSum=5.268;VQSLOD=3.4081;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,138,1844	1/1:0,6:6:17.99:257,18,0	0/0:39,0:39:99:0,117,1602	0/0:27,0:27:81.23:0,81,1088	1/1:0,13:13:33.11:526,33,0	1/1:0,24:24:60.20:957,60,0	1/1:0,32:32:90.22:1407,90,0	1/1:1,32:33:96.33:1523,96,0	1/1:0,21:21:54.18:861,54,0	1/1:0,26:26:75.26:1198,75,0	1/1:2,10:12:27.09:431,27,0	1/1:1,19:20:48.16:762,48,0	1/1:0,18:18:42.14:671,42,0	1/1:0,20:21:63.21:986,63,0	1/1:0,22:22:63.21:1002,63,0	1/1:1,17:18:39.13:622,39,0	1/1:0,27:27:66.14:1021,66,0	1/1:0,22:22:60.20:959,60,0	1/1:1,15:16:48.16:745,48,0	1/1:0,13:13:36.12:563,36,0	1/1:0,35:35:90.22:1407,90,0	1/1:0,8:8:24.08:384,24,0	1/1:0,13:13:36.12:574,36,0	1/1:0,23:23:60.20:958,60,0	1/1:0,14:14:42.14:664,42,0	1/1:0,23:23:65.93:997,66,0	1/1:1,17:18:45.15:717,45,0	1/1:0,7:7:15.05:240,15,0
chr10	18663178	.	C	CATGA	33626.28	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=7.826;DP=654;FS=6.560;HRun=0;HaplotypeScore=174.2866;InbreedingCoeff=0.9972;MQ=76.29;MQ0=0;MQRankSum=-13.051;QD=59.94;ReadPosRankSum=1.684;VQSLOD=6.4260;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,123,2246	1/1:7,12:19:45.12:1117,45,0	0/0:28,0:28:78.23:0,78,1335	0/0:21,0:21:36.12:0,36,630	1/1:3,24:27:66.18:1671,66,0	1/1:7,22:29:69.24:1786,69,0	1/1:6,20:26:63.22:1657,63,0	1/1:14,17:31:66.22:1562,66,0	1/1:3,24:28:75.26:1962,75,0	1/1:8,23:31:75.25:1873,75,0	1/1:5,13:18:36.07:778,36,0	1/1:4,14:18:45.12:1126,45,0	1/1:5,13:18:48.13:1171,48,0	1/1:5,19:24:63.18:1590,63,0	1/1:7,26:33:84.25:2122,84,0	1/1:5,17:22:60.16:1447,60,0	1/1:5,13:18:42.14:1032,42,0	1/1:2,13:15:45.15:1114,45,0	1/1:10,9:19:48.10:1048,48,0	1/1:4,16:20:51.13:1284,51,0	1/1:9,10:19:42.09:994,42,0	1/1:10,19:29:72.15:1699,72,0	1/1:2,16:18:45.07:1067,45,0	1/1:5,9:13:18.53:475,19,0	1/1:6,17:23:51.13:1284,51,0	1/1:10,17:27:66.21:1561,66,0	1/1:6,14:20:51.17:1259,51,0	1/1:1,14:15:36.12:948,36,0
chr10	18663190	.	GCT	G	20237.74	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=10.870;DP=632;FS=2.563;HRun=0;HaplotypeScore=195.3920;InbreedingCoeff=0.9990;MQ=74.41;MQ0=5;MQRankSum=-13.089;QD=37.20;ReadPosRankSum=1.467;VQSLOD=5.4166;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,129,2416	1/1:2,13:15:45.13:632,45,0	0/0:30,0:30:84.24:0,84,1382	0/0:15,0:15:42.09:0,42,682	1/1:4,21:25:66.19:927,66,0	1/1:3,24:27:66.20:929,66,0	1/1:3,19:22:51.17:748,51,0	1/1:2,31:33:93.31:1365,93,0	1/1:3,25:28:72.24:1036,72,0	1/1:4,24:28:75.16:1041,75,0	1/1:2,17:19:48.16:695,48,0	1/1:0,20:20:57.19:837,57,0	1/1:1,14:15:36.12:527,36,0	1/1:3,24:25:66.20:946,66,0	1/1:1,26:27:78.26:1135,78,0	1/1:2,24:26:69.23:997,69,0	1/1:3,15:18:39.13:573,39,0	1/1:3,12:15:33.07:454,33,0	1/1:0,17:17:48.14:684,48,0	1/1:3,18:21:51.17:748,51,0	1/1:5,18:22:29.14:614,29,0	1/1:3,27:30:84.27:1202,84,0	1/1:4,13:17:42.13:580,42,0	1/1:1,12:12:27.09:396,27,0	1/1:1,22:23:66.21:950,66,0	1/1:0,24:24:69.23:1010,69,0	1/1:2,18:19:54.16:772,54,0	1/1:0,11:11:30.10:441,30,0
chr10	18664590	.	CAG	C	6904.65	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=8.149;DP=692;FS=0.000;HRun=0;HaplotypeScore=136.6628;InbreedingCoeff=0.9991;MQ=82.27;MQ0=1;MQRankSum=-5.395;QD=37.94;ReadPosRankSum=3.219;VQSLOD=6.6044;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,105,1841	0/0:12,0:12:30.06:0,30,514	0/0:28,0:28:78.27:0,78,1416	0/0:21,0:21:59.99:0,60,1008	0/0:18,0:18:41.75:0,42,706	1/1:1,19:19:48.16:688,48,0	1/1:0,25:25:60.20:860,60,0	0/0:31,0:31:93.30:0,93,1650	0/0:24,0:24:63.22:0,63,1148	0/0:27,0:27:81.28:0,81,1485	0/0:14,0:14:20.63:0,21,384	1/1:0,25:25:72.24:1031,72,0	0/0:25,0:25:72.25:0,72,1317	0/0:30,0:30:84.29:0,84,1531	1/1:0,32:32:90.30:1289,90,0	1/1:1,18:19:51.17:729,51,0	0/0:27,0:27:72.25:0,72,1291	1/1:2,17:19:48.16:688,48,0	0/0:22,0:22:54.19:0,54,988	0/0:29,0:29:54.19:0,54,989	0/0:55,0:55:99:0,126,2302	1/1:0,22:22:57.19:810,57,0	0/0:19,0:19:33.08:0,33,604	0/0:31,0:31:62.81:0,63,1153	1/1:0,20:20:57.19:811,57,0	0/0:29,0:29:84.29:0,84,1539	0/0:16,0:16:45.15:0,45,824	0/0:16,0:16:39.13:0,39,714
chr10	18664635	.	C	CT	12866.32	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=0.105;DP=511;FS=0.484;HRun=1;HaplotypeScore=110.5976;InbreedingCoeff=0.9700;MQ=78.59;MQ0=0;MQRankSum=-11.360;QD=29.44;ReadPosRankSum=1.477;VQSLOD=4.6511;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,105,1316	1/1:1,8:9:21.07:314,21,0	0/0:15,0:15:42:0,42,486	0/0:24,0:24:45.67:0,46,711	1/1:2,12:14:17.96:220,18,0	1/1:5,11:16:35.85:475,36,0	1/1:2,16:18:45.12:647,45,0	1/1:5,28:33:81.18:1190,81,0	1/1:2,16:18:42.12:627,42,0	1/1:3,14:17:42:584,42,0	1/1:0,13:13:8.92:111,9,0	1/1:1,20:21:50.97:638,51,0	1/1:1,14:15:24:308,24,0	1/1:1,17:18:24.04:333,24,0	1/1:1,23:24:53.99:693,54,0	1/1:4,13:17:48.06:657,48,0	1/1:3,12:15:39.13:572,39,0	1/1:1,13:14:36.12:538,36,0	1/1:1,17:18:51.12:717,51,0	1/1:2,17:19:41.71:424,42,0	1/1:6,17:23:38.92:504,39,0	1/1:1,12:13:20.90:212,21,0	1/1:0,18:18:32.94:390,33,0	1/1:1,21:22:21.07:302,21,0	1/1:3,16:19:51.09:711,51,0	1/1:0,17:17:51.16:741,51,0	1/1:2,15:17:42.09:589,42,0	1/1:0,9:9:26.76:370,27,0
chr10	18664637	.	A	ATGGACCTGATATTTTTGGGCCATGTGACCATG	156114.02	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=8.044;DP=801;FS=2.872;HRun=0;HaplotypeScore=703.6026;InbreedingCoeff=0.9997;MQ=64.30;MQ0=0;MQRankSum=-11.945;QD=214.74;ReadPosRankSum=3.700;VQSLOD=2.2521;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,105,6556	1/1:14,0:14:36.12:2972,36,0	0/0:15,0:15:33.11:0,33,1457	0/0:22,0:22:53.57:0,54,2226	1/1:19,0:19:45.14:2993,45,0	1/1:24,1:25:66.20:5637,66,0	1/1:35,0:35:93.26:6747,93,0	1/1:49,0:49:99:7270,128,0	1/1:29,0:29:69.24:7300,69,0	1/1:25,0:25:54.66:5022,55,0	1/1:19,0:19:36.12:2422,36,0	1/1:41,0:40:99:11718,120,0	1/1:39,0:39:99:10258,102,0	1/1:39,0:39:99:10208,105,0	1/1:38,1:39:99:9458,111,0	1/1:30,1:31:81.26:7908,81,0	1/1:29,1:30:66.14:5349,66,0	1/1:17,0:17:45.13:4896,45,0	1/1:26,0:26:60.21:5600,60,0	1/1:21,0:21:54.18:4035,54,0	1/1:32,0:32:57.20:4234,57,0	1/1:26,0:26:66.18:5577,66,0	1/1:22,0:22:54.17:3608,54,0	1/1:33,1:34:62.79:4012,63,0	1/1:27,0:27:63.69:5399,64,0	1/1:37,0:37:99:10527,108,0	1/1:37,1:38:99:9998,102,0	1/1:12,1:13:33.11:2966,33,0
chr10	18664992	.	AATATATATATATATATATATATATATATAAT	A	5705.98	PASS	AB=1.000;AC=27;AF=0.500;AN=54;BaseQRankSum=1.700;DP=339;FS=12.944;HRun=0;HaplotypeScore=179.2001;InbreedingCoeff=0.6340;MQ=62.83;MQ0=17;MQRankSum=-1.165;QD=37.29;ReadPosRankSum=3.374;VQSLOD=3.1543;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:3,0:3:3.01:0,3,204	1/1:0,2:2:3.01:242,3,0	0/0:46,0:18:15.94:0,16,300	0/0:61,0:11:15.88:0,16,652	1/1:7,9:16:2.97:20,3,0	0/0:4,0:4:12.04:0,12,916	0/0:3,0:3:9.03:0,9,686	0/0:22,0:22:53.10:0,53,2534	1/1:3,7:10:9.03:725,9,0	1/1:10,4:14:12.03:344,12,0	1/1:5,4:9:5.98:235,6,0	0/1:5,0:5:4.52:5,0,521	1/1:2,7:9:4.92:481,5,0	1/1:5,15:20:9.03:725,9,0	0/0:6,0:6:12.03:0,12,740	0/0:4,0:4:12.04:0,12,720	1/1:5,14:19:12.04:966,12,0	0/0:21,0:19:30.06:0,30,2131	0/0:5,0:5:9.03:0,9,418	0/0:3,0:3:5.95:0,6,139	0/0:4,0:4:5.61:0,6,83	./.	1/1:1,2:2:3.01:242,3,0	1/1:3,11:14:3.01:241,3,0	0/0:3,0:3:5.93:0,6,40	1/1:7,5:12:12.04:760,12,0	1/1:3,10:13:4.37:480,4,0	1/1:3,4:6:3.01:242,3,0
chr10	18665001	.	A	AT	1288.79	PASS	AB=1.000;AC=22;AF=0.407;AN=54;BaseQRankSum=-6.267;DP=287;FS=2.766;HRun=1;HaplotypeScore=77.5579;InbreedingCoeff=0.5603;MQ=66.18;MQ0=20;MQRankSum=-0.421;QD=16.74;ReadPosRankSum=-1.841;VQSLOD=3.3561;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:3,0:3:3.01:0,3,38	0/0:2,0:2:2.22:0,2,7	0/0:48,0:20:13.41:0,13,131	0/0:70,0:11:16.68:0,17,141	0/0:9,0:9:0:0,0,0	1/1:4,0:4:11.78:92,12,0	1/1:3,0:3:7.08:52,7,0	1/1:16,7:23:41.03:675,41,0	0/0:7,0:7:6.66:0,7,21	0/1:4,0:4:1.94:12,0,2	0/1:4,0:4:0:0,0,0	1/1:3,0:3:8.86:74,9,0	0/0:7,0:7:3.94:0,4,13	0/0:15,0:15:6.66:0,7,21	1/1:4,0:4:7.75:63,8,0	1/1:4,0:4:11.89:115,12,0	0/0:14,0:14:8.88:0,9,28	1/1:18,0:16:21.59:149,22,0	1/1:2,1:3:8.94:102,9,0	0/1:2,0:2:1.27:35,0,1	1/1:2,0:2:6.02:80,6,0	./.	0/0:2,0:2:2.22:0,2,7	0/0:12,0:12:2.22:0,2,7	0/1:3,0:3:0:0,0,0	0/0:5,0:5:6.66:0,7,21	0/0:10,0:10:4.44:0,4,14	0/0:5,0:4:2.22:0,2,7
chr10	18665002	.	TA	T	1633.88	PASS	AB=0.775;AC=44;AF=0.815;AN=54;BaseQRankSum=-0.168;DP=286;FS=2.180;HRun=1;HaplotypeScore=75.7863;InbreedingCoeff=0.4466;MQ=66.20;MQ0=21;MQRankSum=-3.022;QD=9.90;ReadPosRankSum=4.242;VQSLOD=1.6944;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:3,0:3:6.02:0,6,75	1/1:2,0:2:2.22:7,2,0	0/0:47,0:20:15.60:0,16,151	0/0:71,0:11:17.59:0,18,186	0/1:9,0:9:0:0,0,0	1/1:0,4:4:12.03:134,12,0	1/1:0,3:3:9:104,9,0	1/1:14,9:23:5.58:557,6,0	1/1:7,0:7:6.66:21,7,0	1/1:4,0:4:5.05:24,5,0	0/1:4,0:4:0.02:0,0,0	1/1:1,2:3:9.02:102,9,0	1/1:7,0:7:4.44:14,4,0	1/1:15,0:15:6.66:21,7,0	1/1:0,3:3:8.97:91,9,0	1/1:0,4:4:12.03:143,12,0	1/1:14,0:14:8.88:28,9,0	1/1:3,10:16:26.78:264,27,0	1/1:2,1:3:8.99:86,9,0	0/1:0,2:2:7.57:34,0,8	1/1:0,2:2:6.02:80,6,0	./.	1/1:3,0:2:2.22:7,2,0	1/1:12,0:12:2.22:7,2,0	0/1:1,2:3:0:0,0,0	1/1:5,0:5:6.66:21,7,0	1/1:10,0:10:4.41:14,4,0	1/1:5,0:4:2.22:7,2,0
chr10	18665013	.	A	AG	310.18	PASS	AB=0.882;AC=5;AF=0.100;AN=50;BaseQRankSum=-3.341;DP=278;FS=2.601;HRun=0;HaplotypeScore=85.8580;InbreedingCoeff=0.1409;MQ=74.80;MQ0=17;MQRankSum=-3.234;QD=8.38;ReadPosRankSum=-1.927;VQSLOD=3.1197;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:3,0:3:6.02:0,6,83	0/0:2,0:2:2.22:0,2,7	0/0:41,0:18:5.40:0,5,62	0/0:69,0:17:19.15:0,19,193	./.	0/0:4,0:4:10.84:0,11,112	0/0:4,0:4:12.03:0,12,143	0/1:20,6:26:99:353,0,144	0/0:7,0:7:6.66:0,7,21	0/0:4,0:4:2.22:0,2,7	1/1:4,0:4:2.80:13,3,0	0/0:2,0:2:6.02:0,6,72	0/0:7,0:7:3.94:0,4,14	0/0:15,0:15:6.66:0,7,21	0/0:3,0:3:9.03:0,9,112	0/0:2,0:2:6.02:0,6,72	0/0:14,0:14:7.24:0,7,22	0/0:18,0:16:30.07:0,30,350	0/1:4,1:5:36.10:38,0,36	0/1:2,0:2:0:0,0,0	./.	./.	0/0:2,0:2:2.22:0,2,7	0/0:12,0:12:2.22:0,2,7	0/0:2,0:2:3.01:0,3,41	0/0:5,0:5:6.66:0,7,21	0/0:10,0:10:4.44:0,4,14	0/0:5,0:4:2.22:0,2,7
chr10	18665019	.	ATAAT	A	2617.74	PASS	AB=1.000;AC=47;AF=0.904;AN=52;BaseQRankSum=0.826;DP=252;FS=2.842;HRun=0;HaplotypeScore=79.1825;InbreedingCoeff=0.2850;MQ=76.83;MQ0=13;MQRankSum=-2.794;QD=14.71;ReadPosRankSum=3.479;VQSLOD=3.2969;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:4:9.03:0,9,142	1/1:2,0:2:3.01:30,3,0	0/1:26,0:12:10.59:11,0,53	0/0:60,0:17:11.29:0,11,188	./.	1/1:1,3:4:12.04:195,12,0	1/1:2,1:3:5.32:71,5,0	1/1:23,0:23:41.87:598,42,0	1/1:7,0:7:9.02:91,9,0	1/1:4,0:4:6.02:68,6,0	1/1:4,0:4:3.01:33,3,0	1/1:2,2:4:12.04:182,12,0	1/1:7,0:7:5.88:61,6,0	1/1:15,0:15:9.02:91,9,0	1/1:1,1:2:5.85:66,6,0	1/1:1,2:3:9.03:143,9,0	1/1:14,0:14:12.02:122,12,0	1/1:8,9:15:29.82:437,30,0	1/1:5,0:5:12.92:157,13,0	1/1:2,0:2:3.01:34,3,0	./.	1/1:1,0:1:3.01:39,3,0	1/1:2,0:2:3.01:30,3,0	1/1:12,0:12:3.01:30,3,0	1/1:1,0:1:3.01:33,3,0	1/1:5,0:5:12.03:127,12,0	1/1:10,0:10:5.81:61,6,0	1/1:5,0:4:3.01:30,3,0
chr10	18665021	.	AAT	A	2307.26	PASS	AB=1.000;AC=48;AF=0.923;AN=52;BaseQRankSum=1.468;DP=251;FS=4.843;HRun=0;HaplotypeScore=76.5487;InbreedingCoeff=0.1692;MQ=76.11;MQ0=11;MQRankSum=-3.595;QD=9.82;ReadPosRankSum=2.565;VQSLOD=2.9543;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:6:15.05:0,15,236	1/1:2,0:2:2.90:16,3,0	0/1:25,0:11:11.88:12,0,42	0/1:56,0:16:6.12:6,0,102	./.	1/1:5,0:5:15.05:191,15,0	1/1:3,0:3:5.98:58,6,0	1/1:7,13:20:48.11:568,48,0	1/1:7,0:7:8.71:49,9,0	1/1:4,0:4:5.91:54,6,0	1/1:4,0:4:3.01:33,3,0	1/1:4,0:4:12.04:154,12,0	1/1:7,0:7:5.52:33,6,0	1/1:15,0:15:8.71:49,9,0	1/1:3,0:3:6.02:76,6,0	1/1:4,0:4:12.04:152,12,0	1/1:14,0:14:11.70:70,12,0	1/1:16,2:17:36.09:427,36,0	1/1:2,4:6:15.01:167,15,0	1/1:1,1:2:3.01:34,3,0	./.	1/1:2,0:2:6.02:76,6,0	1/1:2,0:2:2.90:16,3,0	1/1:12,0:12:2.90:16,3,0	1/1:0,1:1:3.01:33,3,0	1/1:5,0:5:11.72:85,12,0	1/1:10,0:10:5.77:33,6,0	1/1:4,0:4:2.90:16,3,0
chr10	18666011	.	GAGCA	G	16508.88	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=11.079;DP=464;FS=14.563;HRun=0;HaplotypeScore=193.6779;InbreedingCoeff=0.9365;MQ=75.50;MQ0=0;MQRankSum=-12.608;QD=42.11;ReadPosRankSum=2.231;VQSLOD=4.3219;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,102,2656	1/1:1,10:11:30.10:559,30,0	0/0:19,0:19:54.19:0,54,1383	0/0:18,0:18:41.81:0,42,993	1/1:2,15:17:39.13:726,39,0	1/1:2,12:14:36.11:640,36,0	1/1:9,15:24:45.15:839,45,0	1/1:8,13:21:42.13:754,42,0	1/1:2,8:10:24.08:447,24,0	1/1:5,17:21:45.06:839,45,0	1/1:0,11:11:27.09:503,27,0	1/1:3,18:21:57.20:1062,57,0	1/1:2,15:17:42.14:783,42,0	1/1:3,14:17:39.13:727,39,0	1/1:2,15:17:45.15:839,45,0	1/1:1,12:13:33.11:615,33,0	1/1:6,12:18:33.11:615,33,0	1/1:1,8:9:24.08:448,24,0	1/1:7,16:23:51.15:917,51,0	1/1:2,21:23:57.20:1063,57,0	1/1:3,12:15:21.41:389,21,0	1/1:1,14:14:39.13:727,39,0	1/1:3,13:14:27.09:503,27,0	1/1:1,14:15:33.11:612,33,0	1/1:2,11:13:33.11:615,33,0	1/1:2,12:14:39.13:727,39,0	1/1:4,10:14:27.09:503,27,0	1/1:1,1:2:3.01:56,3,0
chr10	18666033	.	G	GTCTT	23721.33	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=11.037;DP=461;FS=5.445;HRun=0;HaplotypeScore=172.0002;InbreedingCoeff=0.9330;MQ=81.60;MQ0=0;MQRankSum=-12.967;QD=62.10;ReadPosRankSum=1.880;VQSLOD=6.1114;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,102,1884	1/1:3,10:13:30.10:798,30,0	0/0:24,0:24:60.20:0,60,1068	0/0:20,0:20:57.16:0,57,958	1/1:5,16:21:48.12:1210,48,0	1/1:4,13:17:36.12:959,36,0	1/1:8,12:20:48.16:1182,48,0	1/1:11,15:27:69.24:1674,69,0	1/1:0,8:8:24.08:639,24,0	1/1:4,14:17:43.39:1099,43,0	1/1:3,10:14:33.07:817,33,0	1/1:1,16:17:45.15:1160,45,0	1/1:2,14:16:45.15:1160,45,0	1/1:2,7:9:24.08:602,24,0	1/1:5,10:15:36.12:895,36,0	1/1:3,7:10:27.09:678,27,0	1/1:2,17:19:54.19:1436,54,0	1/1:5,5:10:27.09:599,27,0	1/1:6,9:15:42.12:1000,42,0	1/1:6,18:24:57.20:1470,57,0	1/1:3,14:18:37.28:763,37,0	1/1:4,16:19:51.13:1259,51,0	1/1:4,9:12:30.10:757,30,0	1/1:6,12:18:42.10:1020,42,0	1/1:4,12:17:45.15:1112,45,0	1/1:5,9:15:39.13:953,39,0	1/1:3,4:7:15.05:399,15,0	1/1:0,1:1:3.01:80,3,0
chr10	18666829	.	GA	G	13114.27	PASS	AB=0.600;AC=51;AF=0.911;AN=56;BaseQRankSum=-4.120;DP=740;FS=6.360;HRun=11;HaplotypeScore=87.5327;InbreedingCoeff=0.6905;MQ=63.41;MQ0=1;MQRankSum=-1.504;QD=18.68;ReadPosRankSum=2.480;VQSLOD=5.7691;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,39:43:81.13:728,81,0	0/1:2,4:6:20:62,0,20	0/0:19,0:12:10.37:0,10,85	0/0:18,1:11:5.46:0,5,126	1/1:6,34:40:26.35:620,26,0	1/1:5,19:24:28.28:436,28,0	1/1:3,29:32:80.90:665,81,0	1/1:9,24:33:62.52:501,63,0	1/1:2,18:22:55.01:430,55,0	1/1:3,38:41:85.80:852,86,0	1/1:3,21:24:59.91:492,60,0	1/1:4,14:19:14.85:315,15,0	1/1:1,19:20:53.92:443,54,0	1/1:2,26:28:74.91:616,75,0	1/1:8,18:26:50.82:409,51,0	1/1:3,21:24:33.93:485,34,0	1/1:5,38:43:99:869,107,0	1/1:7,32:40:88.90:720,89,0	1/1:1,20:21:58.93:466,59,0	1/1:6,23:29:50.87:418,51,0	1/1:0,9:9:23.97:197,24,0	1/1:1,27:28:65.90:541,66,0	1/1:5,24:29:30.74:460,31,0	1/1:2,23:25:68.92:567,69,0	1/1:3,28:31:74.86:610,75,0	1/1:3,24:27:71.88:591,72,0	1/1:2,23:26:52.96:425,53,0	1/1:1,10:11:23.97:197,24,0
chr10	18666890	.	G	GAAAACAAAAC	13254.57	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-3.498;DP=824;FS=1.188;HRun=0;HaplotypeScore=248.0472;InbreedingCoeff=0.9963;MQ=60.25;MQ0=8;MQRankSum=-10.738;QD=58.39;ReadPosRankSum=-2.026;VQSLOD=4.3086;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:90.05:0,90,2075	0/0:12,0:12:36.11:0,36,924	0/0:43,0:27:29.57:0,30,431	0/0:48,0:17:15.76:0,16,214	0/0:37,0:37:69.12:0,69,1688	1/1:5,16:24:27.09:1342,27,0	1/1:23,3:26:47.83:1294,48,0	0/0:35,0:33:35.86:0,36,591	0/0:28,0:28:63.22:0,63,1788	0/0:38,0:38:66.23:0,66,1866	0/0:25,0:25:57.02:0,57,1306	1/1:14,7:20:44.91:1415,45,0	0/0:17,0:17:30.10:0,30,776	0/0:22,0:22:35.69:0,36,904	1/1:25,7:32:78.13:2612,78,0	1/1:20,10:30:63.20:2696,63,0	0/0:44,0:44:75.18:0,75,1937	1/1:29,3:32:57.01:1389,57,0	0/0:21,0:21:23.93:0,24,512	0/0:30,0:30:60.20:0,60,1583	0/0:11,0:11:21.07:0,21,567	1/1:27,4:31:47.68:1262,48,0	0/0:24,0:24:44.24:0,44,1176	0/0:34,0:34:69.18:0,69,1727	1/1:27,4:28:48.09:1245,48,0	0/0:32,0:32:78.24:0,78,2040	0/0:26,0:25:44.78:0,45,1053	0/0:25,0:25:57.16:0,57,1449
chr10	18667986	.	A	AT	15222.93	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-8.923;DP=616;FS=3.263;HRun=6;HaplotypeScore=59.0952;InbreedingCoeff=0.9604;MQ=81.86;MQ0=0;MQRankSum=-6.363;QD=29.16;ReadPosRankSum=0.820;VQSLOD=5.5534;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,141,1418	1/1:2,2:4:6.02:75,6,0	0/0:24,0:24:34.50:0,34,428	0/0:20,0:21:54.66:0,55,540	1/1:4,18:22:51.12:608,51,0	1/1:5,14:19:36.12:453,36,0	1/1:3,22:25:48.15:604,48,0	1/1:4,24:28:75.18:900,75,0	1/1:6,18:24:48.15:604,48,0	1/1:1,15:16:38.98:486,39,0	1/1:6,12:18:47.82:473,48,0	1/1:5,27:32:72.23:902,72,0	1/1:2,12:14:39.12:490,39,0	1/1:3,9:12:27.09:340,27,0	1/1:4,23:27:54.17:679,54,0	1/1:3,18:21:48.15:603,48,0	1/1:0,22:22:63.20:792,63,0	1/1:2,14:16:45.10:548,45,0	1/1:3,18:21:54.15:654,54,0	1/1:1,20:21:57.05:661,57,0	1/1:1,30:31:78.25:981,78,0	1/1:2,21:23:54.17:678,54,0	1/1:3,12:15:33.06:397,33,0	1/1:1,28:29:69.22:868,69,0	1/1:3,21:24:57.14:693,57,0	1/1:2,22:24:69.14:803,69,0	1/1:6,15:19:57.17:705,57,0	1/1:5,8:13:18.06:226,18,0
chr10	18667992	.	T	TC	4729.81	PASS	AB=0.989;AC=39;AF=0.696;AN=56;BaseQRankSum=10.831;DP=621;FS=0.359;HRun=5;HaplotypeScore=97.1641;InbreedingCoeff=0.1072;MQ=81.88;MQ0=0;MQRankSum=-4.816;QD=8.99;ReadPosRankSum=7.967;VQSLOD=0.7136;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,135,1443	0/1:5,0:5:26.90:27,0,40	0/0:25,0:25:57.49:0,57,563	0/0:21,0:21:53.87:0,54,526	0/1:23,2:25:0.83:288,0,1	0/1:17,0:17:12.32:120,0,12	0/1:26,0:26:43.88:127,0,44	0/1:32,0:32:66.54:187,0,67	1/1:18,0:18:24.89:180,25,0	0/1:21,0:21:40.58:157,0,41	0/1:20,1:21:3.14:198,0,3	1/1:31,0:31:0.04:261,0,0	1/1:14,0:14:35.60:160,36,0	0/1:11,0:11:14.86:99,0,15	1/1:25,0:25:3.99:162,4,0	0/1:20,0:20:2.30:158,0,2	1/1:23,0:23:38.07:240,38,0	0/1:17,0:17:1.41:118,0,1	1/1:19,0:19:41.94:174,42,0	1/1:24,0:24:2.48:222,2,0	1/1:34,0:34:31.37:291,31,0	1/1:23,0:23:19.01:283,19,0	0/1:14,0:14:4.85:130,0,5	1/1:27,0:27:63.82:290,64,0	1/1:24,1:25:16.20:277,16,0	1/1:25,0:25:29.68:301,30,0	1/1:21,0:19:14.94:192,15,0	1/1:8,0:8:17.12:89,17,0
chr10	18668083	.	C	CT	4320.30	PASS	AB=0.622;AC=24;AF=0.429;AN=56;BaseQRankSum=-0.685;DP=646;FS=0.000;HRun=12;HaplotypeScore=96.6871;InbreedingCoeff=0.7891;MQ=67.14;MQ0=1;MQRankSum=0.796;QD=15.27;ReadPosRankSum=-1.482;VQSLOD=4.7231;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,3:35:24.16:0,24,494	1/1:7,9:16:2.07:170,2,0	0/0:26,0:19:21.33:0,21,138	0/0:16,0:11:13.34:0,13,78	1/1:9,17:26:31.30:445,31,0	0/0:18,1:22:12.66:0,13,229	0/0:24,0:25:52.68:0,53,376	0/0:28,1:32:24.50:0,25,312	1/1:8,6:14:24.02:224,24,0	0/1:17,17:34:52.39:333,0,52	1/1:9,18:27:26.12:406,26,0	0/0:23,0:23:9.44:0,9,233	0/1:4,11:15:19.77:150,0,20	1/1:6,8:14:27.04:263,27,0	0/0:17,0:18:31.76:0,32,225	0/0:21,0:22:34.70:0,35,246	1/1:2,19:22:47.07:473,47,0	0/0:28,0:29:82.57:0,83,597	0/0:21,1:23:14.55:0,15,261	0/0:21,1:25:6.09:0,6,269	0/0:18,0:18:29.75:0,30,219	0/0:18,2:20:16.82:0,17,259	1/1:5,16:23:23.87:369,24,0	1/1:7,9:17:22.73:314,23,0	0/0:27,1:28:23.42:0,23,327	1/1:11,15:28:28.84:415,29,0	1/1:4,31:35:62.89:612,63,0	1/1:0,10:10:15.02:146,15,0
chr10	18668299	.	A	AT	19576.94	PASS	AC=52;AF=1.000;AN=52;DP=559;FS=0.000;HRun=2;HaplotypeScore=339.5589;InbreedingCoeff=-0.0007;MQ=32.01;MQ0=0;QD=35.08;VQSLOD=3.2481;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,24:28:63.04:839,63,0	1/1:2,5:7:15.05:215,15,0	./.	./.	1/1:3,17:20:39.13:534,39,0	1/1:1,19:20:60.04:782,60,0	1/1:3,23:26:66.04:828,66,0	1/1:5,27:32:84.28:1204,84,0	1/1:0,17:17:51.10:703,51,0	1/1:4,24:28:75.25:1077,75,0	1/1:5,11:16:33.11:450,33,0	1/1:3,25:27:72.20:1005,72,0	1/1:3,23:26:69.18:960,69,0	1/1:1,18:19:54.05:724,54,0	1/1:3,25:28:84.21:1164,84,0	1/1:1,18:19:57.12:793,57,0	1/1:2,13:15:36.12:503,36,0	1/1:2,9:11:23.98:298,24,0	1/1:3,21:24:68.89:943,69,0	1/1:2,15:17:45.11:602,45,0	1/1:2,13:15:30.01:357,30,0	1/1:2,16:18:45.15:635,45,0	1/1:6,17:23:56.92:669,57,0	1/1:3,11:14:26.84:334,27,0	1/1:4,28:32:90.26:1246,90,0	1/1:4,26:30:81.22:1139,81,0	1/1:5,28:34:87.19:1200,87,0	1/1:0,11:11:32.84:373,33,0
chr10	18668317	.	CT	C	16321.50	PASS	AC=52;AF=1.000;AN=52;DP=550;FS=0.000;HRun=4;HaplotypeScore=362.6517;InbreedingCoeff=-0.0003;MQ=29.44;MQ0=0;QD=29.68;VQSLOD=1.8116;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,28:29:66.03:724,66,0	1/1:0,9:9:24.07:287,24,0	./.	./.	1/1:2,21:23:41.90:485,42,0	1/1:1,22:23:63.05:705,63,0	1/1:1,23:24:60.18:718,60,0	1/1:3,25:28:72.18:845,72,0	1/1:0,19:19:57.17:682,57,0	1/1:1,25:26:75.19:881,75,0	1/1:2,14:16:30.09:359,30,0	1/1:1,27:28:78.20:917,78,0	1/1:2,23:25:60.08:684,60,0	1/1:0,19:19:48.10:558,48,0	1/1:0,32:32:87.11:991,87,0	1/1:2,21:23:60.13:701,60,0	1/1:0,15:15:39.12:467,39,0	1/1:1,9:10:27.04:307,27,0	1/1:5,17:22:57.15:661,57,0	1/1:1,18:19:42.08:487,42,0	1/1:0,11:11:26.97:289,27,0	1/1:0,16:16:41.96:466,42,0	1/1:0,20:20:54.12:630,54,0	1/1:2,11:13:24.03:271,24,0	1/1:1,32:31:78.20:918,78,0	1/1:0,25:25:75.23:896,75,0	1/1:3,27:30:84.16:960,84,0	1/1:0,12:12:36.11:431,36,0
chr10	18670227	.	GAGGCTGGCTGTTACAGTTTTC	G	50506.07	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=13.071;DP=620;FS=19.089;HRun=0;HaplotypeScore=327.4048;InbreedingCoeff=0.9070;MQ=77.25;MQ0=0;MQRankSum=-13.525;QD=96.75;ReadPosRankSum=7.697;VQSLOD=3.2928;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,144,8917	1/1:1,13:14:12.04:707,12,0	0/0:25,0:25:69.21:0,69,4346	0/0:25,0:25:55.62:0,56,4357	1/1:0,20:20:30.10:1471,30,0	1/1:1,22:23:54.19:3118,54,0	1/1:0,13:13:21.07:1238,21,0	1/1:2,20:22:63.02:1823,63,0	1/1:0,26:26:60.21:3537,60,0	1/1:0,14:14:39.03:1550,39,0	1/1:1,15:16:23.79:1324,24,0	1/1:4,29:33:66.23:3891,66,0	1/1:0,32:32:57.20:3348,57,0	1/1:0,34:34:81.28:4773,81,0	1/1:0,25:25:60.21:3512,60,0	1/1:0,22:22:42.06:2474,42,0	1/1:0,26:26:33.11:1868,33,0	1/1:0,12:12:24.08:1363,24,0	1/1:0,15:15:42:1586,42,0	1/1:0,23:23:45.15:2368,45,0	1/1:1,37:38:12.04:529,12,0	1/1:0,14:14:15.05:830,15,0	1/1:2,19:21:32.82:1945,33,0	1/1:0,16:16:14.16:748,14,0	1/1:2,20:22:36.12:1826,36,0	1/1:0,16:16:41.98:1723,42,0	1/1:2,21:23:48.16:2776,48,0	1/1:0,2:2:3.01:177,3,0
chr10	18671284	.	GGCGCGC	G	9458.66	PASS	AB=0.683;AC=43;AF=0.860;AN=50;BaseQRankSum=3.646;DP=506;FS=0.826;HRun=0;HaplotypeScore=184.9878;InbreedingCoeff=0.3595;MQ=60.80;MQ0=1;MQRankSum=-2.325;QD=21.45;ReadPosRankSum=2.422;VQSLOD=4.6728;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:54.11:0,54,1367	1/1:0,7:7:8.99:130,9,0	0/0:13,0:12:3.01:0,3,44	./.	./.	1/1:6,15:21:15.04:249,15,0	1/1:14,11:25:30.07:391,30,0	1/1:5,12:17:39.13:828,39,0	1/1:13,4:17:15.03:229,15,0	1/1:8,13:21:27.92:584,28,0	./.	1/1:15,5:20:24.07:392,24,0	1/1:13,5:18:33.56:501,34,0	1/1:20,1:21:33.08:547,33,0	1/1:16,5:21:21.07:396,21,0	1/1:18,6:24:39.09:614,39,0	1/1:21,5:26:60.10:871,60,0	1/1:13,3:16:35.93:574,36,0	0/1:8,9:17:27.49:503,0,27	0/1:7,10:17:33.35:166,0,33	1/1:10,22:31:5.18:118,5,0	1/1:6,4:10:5.91:66,6,0	1/1:8,7:15:14.03:177,14,0	1/1:35,9:44:30.06:535,30,0	1/1:14,4:18:27.07:393,27,0	0/1:9,4:13:22.19:444,0,22	1/1:7,4:11:18.06:342,18,0	1/1:9,1:10:21.07:409,21,0
chr10	18671292	.	CGCGCGCGTGT	C	9527.67	PASS	AB=0.985;AC=43;AF=0.860;AN=50;BaseQRankSum=3.553;DP=456;FS=0.000;HRun=0;HaplotypeScore=190.6826;InbreedingCoeff=0.3120;MQ=48.03;MQ0=7;MQRankSum=-0.347;QD=23.41;ReadPosRankSum=3.165;VQSLOD=3.9529;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:23:54.11:0,54,872	1/1:8,0:8:8.75:129,9,0	0/0:6,0:4:3.01:0,3,42	./.	./.	1/1:16,3:19:15.05:340,15,0	1/1:21,0:20:30.07:397,30,0	1/1:17,0:17:0.60:288,1,0	1/1:15,1:16:15.03:278,15,0	0/1:20,1:20:22.20:615,0,22	./.	1/1:15,1:16:24.08:455,24,0	1/1:18,0:19:32.60:542,33,0	1/1:11,3:14:33.11:697,33,0	1/1:15,2:17:21.07:453,21,0	1/1:22,1:22:39.10:675,39,0	1/1:25,1:26:6.59:902,7,0	1/1:16,2:18:32.13:628,32,0	0/1:15,0:15:7.20:239,0,7	0/1:13,0:13:11:140,0,11	1/1:28,0:27:5.58:78,6,0	1/1:6,2:8:5.97:97,6,0	1/1:16,1:16:15:257,15,0	1/1:41,0:40:30.07:556,30,0	1/1:16,2:18:27.09:458,27,0	1/1:12,0:12:8.56:465,9,0	1/1:9,2:10:11.22:394,11,0	1/1:8,1:8:21.07:442,21,0
chr10	18671308	.	CGTGTGT	C	980.05	PASS	AB=0.929;AC=31;AF=0.620;AN=50;BaseQRankSum=5.757;DP=410;FS=2.658;HRun=0;HaplotypeScore=188.5525;InbreedingCoeff=0.0160;MQ=39.13;MQ0=21;MQRankSum=-0.552;QD=3.15;ReadPosRankSum=5.202;VQSLOD=2.6451;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:17:27.07:0,27,371	0/1:7,0:7:0.11:0,0,0	./.	./.	./.	0/1:9,3:12:22.23:136,0,22	0/1:17,0:16:12.66:15,0,13	0/0:21,0:17:24.12:0,24,137	1/1:13,1:14:3.48:54,3,0	0/1:22,1:22:54.50:96,0,54	1/1:4,0:4:0.47:1,0,0	1/1:11,1:12:6.59:62,7,0	1/1:16,0:16:3.42:9,3,0	0/1:12,3:14:4.86:118,0,5	1/1:13,2:14:1.02:89,1,0	1/1:14,1:14:7.57:58,8,0	0/1:20,1:20:36.53:37,0,122	1/1:11,2:13:7.82:138,8,0	0/0:9,0:7:7.38:0,7,42	0/1:10,0:11:0.20:34,0,0	0/0:30,0:23:2.04:0,2,6	1/1:5,2:7:2.68:11,3,0	0/1:20,1:20:31.02:35,0,31	1/1:43,0:42:6.97:18,7,0	1/1:8,2:10:0.33:49,0,0	0/1:9,0:7:3.41:5,0,3	0/1:13,2:14:6.86:86,0,7	0/1:10,1:9:3.77:65,0,4
chr10	18671318	.	CGT	C	573.82	PASS	AB=0.922;AC=34;AF=0.654;AN=52;BaseQRankSum=3.419;DP=447;FS=8.305;HRun=0;HaplotypeScore=190.3423;InbreedingCoeff=0.1809;MQ=34.81;MQ0=25;MQRankSum=-2.650;QD=1.60;ReadPosRankSum=2.752;VQSLOD=2.0359;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:20,0:19:0:0,0,0	0/0:6,0:6:0:0,0,0	./.	./.	1/1:8,1:8:3.01:30,3,0	1/1:10,0:13:10.89:50,11,0	0/0:21,0:20:2.94:0,3,33	0/0:17,0:13:2.92:0,3,17	1/1:14,1:16:5.51:39,6,0	1/1:19,2:21:8.82:67,9,0	1/1:4,3:7:2.94:18,3,0	1/1:17,0:18:0.73:10,1,0	0/0:19,1:20:0:0,0,1	1/1:14,4:20:11.72:86,12,0	0/1:15,0:16:19.06:19,0,23	1/1:14,0:14:2.51:10,3,0	0/1:18,1:19:8.01:8,0,30	0/1:20,0:22:15.38:15,0,17	0/0:11,0:8:5.23:0,5,39	1/1:11,0:11:2.74:12,3,0	0/1:34,0:26:0:0,0,0	0/0:6,0:8:0.38:0,0,7	1/1:16,1:19:2.38:13,2,0	1/1:31,7:38:2.84:32,3,0	1/1:10,0:12:8.01:35,8,0	1/1:9,2:9:8.93:72,9,0	1/1:13,3:15:17.37:150,17,0	0/1:10,2:10:23.28:33,0,23
chr10	18671322	.	T	TGC	259.21	PASS	AB=0.885;AC=10;AF=0.192;AN=52;BaseQRankSum=-0.064;DP=465;FS=31.294;HRun=0;HaplotypeScore=200.4265;InbreedingCoeff=0.1036;MQ=35.97;MQ0=25;MQRankSum=0.709;QD=2.07;ReadPosRankSum=0.965;VQSLOD=0.9540;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:18:17.92:0,18,139	0/0:6,0:6:5.92:0,6,39	./.	./.	0/0:9,0:8:2.80:0,3,13	1/1:12,1:13:4.87:53,5,0	0/0:21,3:23:6.82:0,7,66	0/0:17,0:13:38.39:0,38,248	0/0:15,0:15:1.78:0,2,16	0/0:25,0:24:32.85:0,33,300	0/0:9,0:9:1.47:0,1,6	0/1:8,8:17:18.65:36,0,19	0/0:18,2:20:23.96:0,24,149	0/0:21,1:21:26.32:0,26,169	0/0:17,0:16:2.98:0,3,56	0/0:13,2:14:3.47:0,3,76	0/0:21,0:20:21.33:0,21,146	0/1:19,5:25:99:104,0,154	0/0:10,0:7:13.44:0,13,98	0/0:13,0:13:10.49:0,10,72	0/0:38,0:29:7.20:0,7,46	0/1:8,1:9:30.85:59,0,31	0/1:19,1:19:0.25:0,0,20	0/0:43,0:42:24.96:0,25,183	1/1:10,3:13:8.76:94,9,0	0/0:13,0:11:22.29:0,22,135	0/1:18,0:15:9.92:10,0,123	0/1:10,0:7:34.14:34,0,39
chr10	18671326	.	T	TGC	494.67	PASS	AB=1.000;AC=12;AF=0.231;AN=52;BaseQRankSum=-0.292;DP=483;FS=14.437;HRun=0;HaplotypeScore=194.3368;InbreedingCoeff=-0.0194;MQ=37.60;MQ0=24;MQRankSum=1.898;QD=3.19;ReadPosRankSum=0.548;VQSLOD=1.8762;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:16,6:22:20.61:0,21,151	0/0:6,0:6:5.92:0,6,39	./.	./.	0/0:11,0:10:5.93:0,6,41	1/1:14,0:14:7.18:39,7,0	0/1:25,0:24:36.36:62,0,36	0/0:15,0:11:29.18:0,29,183	0/0:17,0:17:4.85:0,5,56	0/0:25,0:24:57.18:0,57,379	0/0:9,0:9:5.95:0,6,43	0/1:19,0:19:12.06:74,0,12	0/0:19,0:19:20.93:0,21,140	0/0:27,0:26:34.19:0,34,250	0/0:16,2:17:4.59:0,5,55	0/1:16,0:16:62.10:84,0,62	0/0:21,0:20:3.01:0,3,134	0/1:26,0:26:99:172,0,126	0/1:9,0:6:7.10:7,0,98	0/1:15,0:15:6.87:7,0,27	0/0:33,3:28:3.85:0,4,22	1/1:8,0:8:2.32:56,2,0	0/0:19,0:18:5.21:0,5,33	0/0:40,0:39:22.17:0,22,170	0/1:13,0:13:10.65:103,0,11	0/0:14,0:12:11.95:0,12,153	0/0:20,0:17:34.93:0,35,204	0/1:10,0:7:30.31:30,0,54
chr10	18675814	.	C	CG	4808.18	PASS	AB=0.625;AC=41;AF=0.732;AN=56;BaseQRankSum=-1.374;DP=415;FS=5.174;HRun=9;HaplotypeScore=85.8560;InbreedingCoeff=0.7998;MQ=80.80;MQ0=0;MQRankSum=-4.318;QD=16.47;ReadPosRankSum=3.535;VQSLOD=5.1541;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:44.94:0,45,390	1/1:9,0:9:23.84:179,24,0	0/0:23,0:21:14.34:0,14,346	0/0:17,0:13:2.45:0,2,179	1/1:12,0:12:23.79:173,24,0	1/1:5,12:17:22.58:214,23,0	1/1:0,13:13:24.06:265,24,0	0/0:19,0:19:38.97:0,39,338	1/1:19,0:19:50.76:395,51,0	1/1:24,0:24:61.14:364,61,0	1/1:4,1:5:11.92:100,12,0	1/1:1,11:12:18.01:185,18,0	1/1:16,0:16:35.50:267,36,0	1/1:20,0:20:56.66:431,57,0	1/1:2,15:17:27.03:284,27,0	1/1:2,10:16:23.40:189,23,0	1/1:14,0:14:23.81:171,24,0	1/1:2,6:8:5.86:67,6,0	0/0:12,0:12:20.97:0,21,179	0/0:15,0:15:26.98:0,27,233	0/0:12,0:12:26.97:0,27,234	1/1:3,3:6:3.25:62,3,0	1/1:14,0:14:35.72:262,36,0	1/1:16,0:16:29.72:215,30,0	0/1:4,6:10:7.98:147,0,8	1/1:21,0:21:55.87:354,56,0	1/1:22,0:22:59.68:466,60,0	1/1:1,0:1:2.94:18,3,0
chr10	18675817	.	G	GA	7238.31	PASS	AB=1.000;AC=34;AF=0.607;AN=56;BaseQRankSum=-6.648;DP=444;FS=9.156;HRun=0;HaplotypeScore=73.4513;InbreedingCoeff=0.4010;MQ=80.58;MQ0=0;MQRankSum=-4.492;QD=23.13;ReadPosRankSum=6.330;VQSLOD=6.0592;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:62.98:0,63,748	1/1:1,9:10:24.08:340,24,0	0/0:25,0:21:63.33:0,63,787	0/0:18,0:14:37.20:0,37,389	1/1:0,12:12:27.02:359,27,0	0/1:17,0:17:31.80:32,0,53	0/1:15,0:15:21.16:44,0,21	0/0:18,0:18:54.02:0,54,655	1/1:1,20:21:39.29:706,39,0	1/1:0,26:26:69.21:952,69,0	1/1:1,3:4:12.03:156,12,0	0/1:12,0:12:4.56:41,0,5	1/1:0,14:15:35.90:501,36,0	1/1:0,21:21:57.19:803,57,0	0/1:17,0:17:18.68:59,0,19	0/1:16,0:16:22.26:22,0,36	1/1:0,13:13:24.08:341,24,0	0/1:8,0:8:13.31:19,0,13	0/0:15,0:15:33.04:0,33,385	0/0:18,0:18:38.97:0,39,458	0/0:14,0:14:35.96:0,36,413	0/1:6,0:6:13.79:14,0,46	1/1:0,13:13:36.12:506,36,0	1/1:0,17:17:36.01:451,36,0	0/1:15,0:15:28.13:28,0,102	1/1:0,27:27:77.84:972,78,0	1/1:0,25:25:63.15:849,63,0	1/1:1,2:3:3.01:43,3,0
chr10	18676962	.	ATG	A	6385.07	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=5.825;DP=1065;FS=22.818;HRun=0;HaplotypeScore=209.1918;InbreedingCoeff=0.9601;MQ=55.74;MQ0=22;MQRankSum=1.253;QD=21.57;ReadPosRankSum=2.218;VQSLOD=3.1798;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:41:99:0,99,1443	0/0:13,0:12:21.03:0,21,312	0/0:45,0:13:28.28:0,28,351	0/0:49,0:19:17.29:0,17,278	0/0:41,1:42:81.16:0,81,1305	1/1:5,21:25:59.74:667,60,0	1/1:9,14:23:39.08:476,39,0	0/0:29,1:28:20.54:0,21,828	0/0:43,6:48:1.44:0,1,1541	0/0:48,0:48:99:0,108,1640	0/0:31,1:31:38.58:0,39,1078	1/1:5,51:46:99:1223,102,0	0/0:43,2:45:23.03:0,23,1362	0/0:42,1:42:99:0,102,1637	1/1:12,39:44:96.13:1150,96,0	1/1:5,40:39:93.29:1136,93,0	0/0:27,0:27:55.74:0,56,880	1/1:4,18:21:33.05:385,33,0	0/0:16,0:14:33.11:0,33,532	0/0:42,2:44:37.77:0,38,1594	0/0:56,4:59:91.92:0,92,1970	1/1:7,19:26:44.97:527,45,0	0/0:36,2:37:35.61:0,36,1082	0/0:51,0:51:99:0,121,1931	1/1:10,29:40:68.67:820,69,0	0/0:42,0:42:93.32:0,93,1506	0/0:30,0:30:69.24:0,69,1110	0/0:23,0:23:25.16:0,25,843
chr10	18677005	.	ATG	A	10313.90	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=5.082;DP=1046;FS=17.082;HRun=0;HaplotypeScore=223.9062;InbreedingCoeff=0.9922;MQ=55.80;MQ0=13;MQRankSum=7.546;QD=26.51;ReadPosRankSum=3.998;VQSLOD=3.9657;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,2:40:64.50:0,64,1574	1/1:3,10:13:33.11:416,33,0	0/0:36,0:20:48.14:0,48,736	0/0:49,0:25:45.11:0,45,684	1/1:8,28:36:84.24:1059,84,0	0/0:37,2:39:35.79:0,36,1665	0/0:33,0:33:81.28:0,81,1334	0/0:41,0:41:99:0,99,1598	0/0:52,0:52:99:0,118,1916	1/1:7,40:46:99:1395,114,0	1/1:5,22:27:51.16:643,51,0	0/0:44,0:43:96.31:0,96,1564	1/1:5,35:40:99:1286,102,0	1/1:9,31:40:78.25:984,78,0	0/0:51,0:50:99:0,126,2070	0/0:41,0:39:90.31:0,90,1481	1/1:8,21:28:28.23:583,28,0	0/0:22,0:21:36.12:0,36,598	0/0:32,0:28:67.47:0,67,1097	0/0:36,0:36:90.06:0,90,1461	0/0:68,0:68:99:0,172,2727	0/0:37,0:37:92.99:0,93,1493	1/1:5,22:27:54.13:681,54,0	1/1:11,39:49:99:1248,99,0	0/0:35,0:35:68.69:0,69,1038	1/1:6,28:34:81.22:988,81,0	1/1:5,20:25:54.17:677,54,0	1/1:8,13:21:9.32:353,9,0
chr10	18677293	.	A	ATCTCTCTCTC	16792.38	PASS	AB=0.894;AC=45;AF=0.804;AN=56;BaseQRankSum=-2.161;DP=776;FS=10.606;HRun=0;HaplotypeScore=268.5702;InbreedingCoeff=0.3209;MQ=60.78;MQ0=4;MQRankSum=-7.882;QD=24.73;ReadPosRankSum=-1.314;VQSLOD=2.1948;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:46:54.05:565,0,54	1/1:5,1:11:15.05:611,15,0	0/0:31,0:21:3.01:0,3,81	0/0:29,0:16:9.03:0,9,250	1/1:16,8:27:12.04:555,12,0	1/1:17,2:28:21.07:946,21,0	0/1:23,0:32:4.06:751,0,4	0/1:32,0:32:14.89:15,0,883	1/1:13,10:25:30.57:1209,31,0	1/1:30,5:32:45.13:1803,45,0	1/1:29,1:28:14.85:395,15,0	1/1:29,0:33:17.94:720,18,0	1/1:18,11:29:31.66:1293,32,0	1/1:20,6:26:15.05:747,15,0	1/1:23,3:36:30.10:1357,30,0	1/1:17,2:24:6.01:240,6,0	1/1:15,2:18:15.05:680,15,0	1/1:10,0:15:12.04:562,12,0	0/1:24,0:24:37.13:37,0,365	0/1:17,0:17:9.89:10,0,244	0/0:37,0:36:38.73:0,39,748	1/1:26,1:32:7.83:354,8,0	1/1:13,0:14:5.95:242,6,0	1/1:15,10:29:9:437,9,0	1/1:15,1:26:4.60:259,5,0	1/1:21,9:28:45.12:1297,45,0	1/1:10,8:19:24.08:1146,24,0	1/1:12,5:18:15.48:563,15,0
chr10	18677319	.	C	CTGTGTGTGTG	4667.10	PASS	AB=0.998;AC=31;AF=0.554;AN=56;BaseQRankSum=8.176;DP=791;FS=49.487;HRun=0;HaplotypeScore=286.9834;InbreedingCoeff=-0.6839;MQ=47.82;MQ0=10;MQRankSum=-10.206;QD=6.19;ReadPosRankSum=4.651;VQSLOD=1.9823;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:45,0:45:14.45:14,0,648	0/1:13,0:12:99:102,0,150	0/0:37,0:28:33.21:0,33,1520	0/1:35,0:18:5.81:6,0,652	0/1:31,0:31:99:110,0,762	0/1:26,0:25:99:213,0,354	0/1:30,0:30:82.13:82,0,753	1/1:37,0:37:42.60:1049,43,0	0/1:26,0:26:99:419,0,504	0/1:37,0:32:89.62:90,0,1878	0/1:35,0:32:33.48:33,0,631	0/1:31,0:28:76.59:77,0,502	0/1:31,0:29:99:365,0,892	0/1:24,0:23:99:167,0,218	0/1:35,0:33:99:207,0,854	0/1:26,0:23:23.68:24,0,812	0/1:14,0:14:96.63:97,0,403	0/1:12,0:12:48.14:48,0,464	1/1:18,3:25:30.05:766,30,0	1/1:12,0:30:1.74:89,2,0	1/1:26,13:39:3.01:37,3,0	0/1:32,0:30:51.39:51,0,739	0/1:18,0:17:15.01:15,0,447	0/1:32,0:31:99:101,0,429	0/1:23,0:22:25.95:26,0,233	0/1:30,0:28:97.76:98,0,1354	0/1:16,0:15:99:188,0,557	0/1:17,0:17:99:194,0,490
chr10	18677477	.	GTC	G	12625.80	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-0.302;DP=632;FS=1.036;HRun=0;HaplotypeScore=109.0660;InbreedingCoeff=0.9934;MQ=70.24;MQ0=4;MQRankSum=-3.818;QD=24.28;ReadPosRankSum=4.223;VQSLOD=5.6625;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:55,3:58:32.33:0,32,1986	1/1:1,7:8:21.06:255,21,0	0/0:20,0:14:21.07:0,21,306	0/0:34,0:29:37.30:0,37,447	1/1:8,14:22:35.39:435,35,0	1/1:5,18:23:51.16:619,51,0	1/1:3,15:19:50.97:584,51,0	1/1:8,19:27:57.17:691,57,0	1/1:10,15:25:48.11:567,48,0	1/1:7,6:13:21.06:255,21,0	1/1:5,11:16:23.97:291,24,0	1/1:8,20:27:54.12:639,54,0	1/1:6,14:20:48.06:549,48,0	1/1:6,14:20:44.88:489,45,0	1/1:11,18:30:59.99:692,60,0	1/1:4,12:16:35.30:402,35,0	1/1:7,22:29:69.21:835,69,0	1/1:5,9:13:30.09:363,30,0	1/1:10,10:20:27.05:312,27,0	1/1:7,11:18:33.06:384,33,0	1/1:10,29:38:32.79:881,33,0	1/1:9,11:20:42.13:508,42,0	1/1:3,10:13:27.08:327,27,0	1/1:5,18:22:51.16:618,51,0	1/1:4,18:21:54.12:636,54,0	1/1:8,14:22:39.12:473,39,0	1/1:6,11:17:36.11:433,36,0	1/1:5,10:15:33.09:387,33,0
chr10	18679540	.	G	GT	23962.14	PASS	AB=0.857;AC=55;AF=0.982;AN=56;BaseQRankSum=-1.166;DP=624;FS=2.282;HRun=3;HaplotypeScore=247.1203;InbreedingCoeff=-0.0186;MQ=52.29;MQ0=0;MQRankSum=-2.948;QD=38.40;ReadPosRankSum=2.205;VQSLOD=3.6500;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,32:42:99:1510,105,0	1/1:1,13:14:42.13:604,42,0	1/1:3,5:8:15.05:225,15,0	0/1:10,2:12:19.17:125,0,19	1/1:2,27:29:78.25:1107,78,0	1/1:1,15:16:48.14:686,48,0	1/1:4,20:23:60.16:859,60,0	1/1:6,19:25:60.19:863,60,0	1/1:1,19:20:60.20:884,60,0	1/1:4,26:30:84.28:1229,84,0	1/1:5,12:17:42.13:585,42,0	1/1:1,30:31:90.30:1319,90,0	1/1:2,26:29:84.22:1192,84,0	1/1:1,19:20:57.19:849,57,0	1/1:2,30:32:96.30:1384,96,0	1/1:1,21:22:63.21:939,63,0	1/1:4,23:27:75.19:1051,75,0	1/1:2,9:11:30.08:428,30,0	1/1:5,15:20:51.17:730,51,0	1/1:1,16:18:51.17:746,51,0	1/1:8,25:33:63.21:882,63,0	1/1:5,17:22:63.17:852,63,0	1/1:3,19:22:60.19:839,60,0	1/1:2,12:14:30.10:447,30,0	1/1:1,20:21:63.20:921,63,0	1/1:3,25:28:84.23:1195,84,0	1/1:2,21:22:69.13:977,69,0	1/1:2,10:12:36.12:535,36,0
chr10	18679768	.	C	CA	26126.32	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-7.546;DP=735;FS=1.838;HRun=1;HaplotypeScore=80.5548;InbreedingCoeff=0.9996;MQ=92.85;MQ0=0;MQRankSum=-9.111;QD=41.08;ReadPosRankSum=4.137;VQSLOD=5.3080;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,105,1331	1/1:0,17:17:51.17:757,51,0	0/0:33,0:33:90.27:0,90,1129	0/0:31,0:31:84.08:0,84,1008	1/1:0,20:20:60.20:899,60,0	1/1:2,23:25:63.21:934,63,0	1/1:2,19:21:57.15:829,57,0	1/1:3,36:39:99:1684,114,0	1/1:1,26:27:75.25:1124,75,0	1/1:1,29:30:90.30:1343,90,0	1/1:0,17:17:45.15:674,45,0	1/1:0,31:31:90.30:1349,90,0	1/1:3,21:24:57.19:854,57,0	1/1:0,33:33:81.27:1214,81,0	1/1:2,37:39:99:1529,102,0	1/1:1,42:43:99:1798,120,0	1/1:0,27:27:81.27:1214,81,0	1/1:1,22:23:63.21:943,63,0	1/1:1,23:24:72.22:1042,72,0	1/1:1,18:19:54.18:809,54,0	1/1:1,37:38:99:1483,99,0	1/1:0,16:16:42.14:629,42,0	1/1:2,14:16:42.10:604,42,0	1/1:2,27:29:81.27:1214,81,0	1/1:0,11:11:27.09:405,27,0	1/1:1,29:30:87.27:1268,87,0	1/1:0,21:21:60.20:897,60,0	1/1:2,14:16:42.14:629,42,0
chr10	18680674	.	T	TGGCG	4928.98	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=12.108;DP=754;FS=5.476;HRun=0;HaplotypeScore=135.8011;InbreedingCoeff=0.9993;MQ=87.99;MQ0=0;MQRankSum=-12.685;QD=73.57;ReadPosRankSum=-3.607;VQSLOD=5.6921;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:65,0:65:99:0,187,3848	0/0:14,0:14:42.14:0,42,845	0/0:32,0:32:81.21:0,81,1585	0/0:24,0:24:69.24:0,69,1317	0/0:23,0:23:69.17:0,69,1341	0/0:19,0:19:57.17:0,57,1120	0/0:34,0:34:99:0,102,2070	1/1:8,20:28:84.29:2335,84,0	0/0:27,0:27:78.27:0,78,1625	0/0:24,0:24:69.22:0,69,1377	0/0:28,0:28:84.29:0,84,1752	0/0:31,0:31:93.32:0,93,1939	0/0:29,0:29:87.24:0,87,1731	0/0:32,0:32:96.30:0,96,1939	0/0:32,0:32:93.32:0,93,1951	0/0:26,0:26:78.27:0,78,1625	0/0:26,0:26:78.27:0,78,1636	0/0:22,0:22:66.18:0,66,1304	1/1:2,7:9:24.08:626,24,0	1/1:3,9:12:30.10:853,30,0	1/1:7,11:18:42.14:1115,42,0	0/0:26,0:26:78.27:0,78,1635	0/0:20,0:20:60.21:0,60,1259	0/0:35,0:35:99:0,105,2143	0/0:30,0:30:90.27:0,90,1844	0/0:32,0:32:93.30:0,93,1879	0/0:31,0:29:90.25:0,90,1884	0/0:25,0:25:75.26:0,75,1571
chr10	18681796	.	CA	C	2597.49	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=10.982;DP=734;FS=6.268;HRun=4;HaplotypeScore=74.1658;InbreedingCoeff=1.0000;MQ=83.61;MQ0=0;MQRankSum=-1.007;QD=29.52;ReadPosRankSum=-1.289;VQSLOD=3.0727;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,144,1903	0/0:14,0:14:42.10:0,42,530	0/0:32,0:32:72.06:0,72,847	0/0:25,0:25:47.77:0,48,721	0/0:28,0:28:75.24:0,75,1017	0/0:32,0:32:93.22:0,93,1181	0/0:23,0:23:69.17:0,69,884	1/1:2,30:32:87.22:1009,87,0	0/0:27,0:27:81.20:0,81,1047	0/0:25,0:25:69.23:0,69,952	0/0:25,0:25:72.24:0,72,992	0/0:28,0:28:84.18:0,84,1064	0/0:24,0:24:69.23:0,69,947	0/0:24,0:24:72.21:0,72,959	0/0:24,0:24:69.22:0,69,934	0/0:28,0:28:84.24:0,84,1110	0/0:32,0:32:87.11:0,87,1103	0/0:30,0:30:81.20:0,81,1061	1/1:2,20:22:60.17:709,60,0	1/1:0,15:15:45.14:538,45,0	1/1:0,19:19:42.13:502,42,0	0/0:25,0:25:60.16:0,60,765	0/0:22,0:22:60.18:0,60,785	0/0:28,0:28:78.20:0,78,1024	0/0:19,0:19:48.13:0,48,629	0/0:32,0:32:78.31:0,78,1166	0/0:32,0:31:93.31:0,93,1267	0/0:15,0:15:42.12:0,42,562
chr10	18682646	.	A	AT	3963.45	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-9.063;DP=631;FS=1.396;HRun=1;HaplotypeScore=85.1662;InbreedingCoeff=0.9902;MQ=84.67;MQ0=0;MQRankSum=-0.671;QD=44.04;ReadPosRankSum=-1.278;VQSLOD=3.1178;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,123,1678	0/0:4,0:4:12.04:0,12,167	0/0:26,0:26:75.08:0,75,956	0/0:12,0:12:30.06:0,30,398	0/0:12,0:12:36.12:0,36,503	0/0:30,0:29:90.30:0,90,1259	0/0:20,0:20:60.20:0,60,839	1/1:2,34:36:99:1565,102,0	0/0:32,0:32:96.32:0,96,1341	0/0:36,0:36:99:0,108,1488	0/0:17,0:17:45.15:0,45,629	0/0:15,0:15:45.15:0,45,624	0/0:24,0:24:72.24:0,72,1007	0/0:19,0:19:54.17:0,54,738	0/0:32,0:31:96.32:0,96,1341	0/0:22,0:22:66.22:0,66,922	0/0:25,0:25:75.25:0,75,1043	0/0:21,0:21:63.17:0,63,841	1/1:0,18:18:54.18:863,54,0	1/1:0,17:17:42.14:672,42,0	1/1:1,18:19:54.18:863,54,0	0/0:32,0:32:90.27:0,90,1217	0/0:23,0:23:63.19:0,63,862	0/0:20,0:20:60.20:0,60,839	0/0:26,0:26:78.26:0,78,1090	0/0:20,0:20:60.20:0,60,838	0/0:24,0:24:69.22:0,69,948	0/0:7,0:7:21.07:0,21,294
chr10	18682777	.	T	TTTCACTC	7738.60	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-2.200;DP=696;FS=0.923;HRun=0;HaplotypeScore=159.4363;InbreedingCoeff=0.9902;MQ=91.26;MQ0=3;MQRankSum=-11.797;QD=80.61;ReadPosRankSum=-5.962;VQSLOD=3.5395;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,129,3067	0/0:5,0:5:12.04:0,12,289	0/0:30,0:30:84.23:0,84,1932	0/0:28,0:28:49.26:0,49,1450	0/0:31,0:31:84.28:0,84,2189	0/0:28,0:28:81.28:0,81,2155	0/0:21,0:21:60.17:0,60,1415	1/1:12,16:36:99:3532,99,0	0/0:29,0:29:87.29:0,87,2220	0/0:26,0:26:75.24:0,75,1833	0/0:17,0:17:42.14:0,42,1113	0/0:20,0:20:57.20:0,57,1489	0/0:30,0:30:90.31:0,90,2357	0/0:27,0:27:81.28:0,81,2140	0/0:28,0:28:75.26:0,75,2010	0/0:23,0:23:66.23:0,66,1769	0/0:28,0:28:84.29:0,84,2226	0/0:22,0:22:66.23:0,66,1703	1/1:4,8:19:54.17:1796,54,0	1/1:2,16:23:54.19:1870,54,0	1/1:4,8:15:21.03:540,21,0	0/0:20,0:20:60.21:0,60,1600	0/0:24,0:24:69.23:0,69,1750	0/0:30,0:30:90.26:0,90,2201	0/0:25,0:25:75.25:0,75,1888	0/0:22,0:22:66.23:0,66,1780	0/0:31,0:30:93.30:0,93,2380	0/0:11,0:11:30.10:0,30,809
chr10	18685426	.	T	TTCAG	32138.86	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-10.636;DP=824;FS=3.304;HRun=0;HaplotypeScore=105.7758;InbreedingCoeff=0.9968;MQ=70.39;MQ0=5;MQRankSum=-1.614;QD=42.62;ReadPosRankSum=3.767;VQSLOD=5.4738;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:96.21:0,96,1470	1/1:4,13:16:24.08:599,24,0	0/0:19,0:17:38.17:0,38,461	0/0:12,0:11:20.65:0,21,192	1/1:4,29:33:86.96:1872,87,0	1/1:2,27:28:60.21:1462,60,0	1/1:8,17:26:27.09:674,27,0	1/1:11,20:36:74.55:1001,75,0	1/1:7,27:35:66.23:1648,66,0	1/1:6,25:32:81.09:1560,81,0	1/1:4,26:28:65.79:1357,66,0	1/1:7,32:39:65.89:1648,66,0	1/1:3,27:29:56.98:1420,57,0	1/1:5,34:39:66.23:1643,66,0	1/1:8,20:30:39.13:974,39,0	1/1:3,29:34:60.21:1499,60,0	1/1:8,18:25:42.13:997,42,0	1/1:12,7:19:35.99:647,36,0	1/1:4,14:19:45.10:831,45,0	1/1:8,27:36:71.92:1529,72,0	1/1:2,23:26:45.15:1112,45,0	1/1:7,26:33:56.83:1245,57,0	1/1:8,26:35:54.19:1349,54,0	1/1:2,30:33:75.26:1873,75,0	1/1:2,20:22:42.14:1049,42,0	1/1:7,31:37:90.19:1997,90,0	1/1:3,27:29:60.21:1481,60,0	1/1:9,15:24:27.09:674,27,0
chr10	18686649	.	C	CGTGTGCT	28860.37	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=-7.327;DP=736;FS=14.715;HRun=0;HaplotypeScore=160.8239;InbreedingCoeff=0.9579;MQ=81.05;MQ0=0;MQRankSum=-16.483;QD=57.84;ReadPosRankSum=2.596;VQSLOD=4.0068;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,105,2381	1/1:5,12:17:36.12:1348,36,0	0/0:30,0:30:60.10:0,60,1168	0/0:30,0:30:42.83:0,43,922	1/1:8,8:18:15.05:560,15,0	1/1:7,20:29:39.13:1449,39,0	1/1:9,18:29:45.15:1683,45,0	0/0:31,0:31:42.11:0,42,786	1/1:4,13:18:33.11:1235,33,0	1/1:18,10:28:57.20:1864,57,0	1/1:4,4:8:12.04:449,12,0	1/1:15,19:36:62.96:2336,63,0	1/1:17,21:40:84.29:3131,84,0	1/1:12,15:29:42.14:1526,42,0	1/1:11,15:26:38.97:1460,39,0	1/1:9,15:24:39.13:1461,39,0	1/1:10,16:27:39.13:1457,39,0	1/1:6,11:18:24.03:807,24,0	0/0:28,0:28:45.15:0,45,999	0/0:23,0:23:60.21:0,60,1396	0/0:46,0:46:99:0,111,2431	1/1:11,14:25:48.16:1792,48,0	1/1:3,6:10:18.06:673,18,0	1/1:11,16:30:24.08:895,24,0	1/1:8,17:25:42.14:1544,42,0	1/1:14,18:32:63.22:2179,63,0	1/1:6,14:21:24.08:899,24,0	1/1:9,0:9:3.01:113,3,0
chr10	18688282	.	G	GC	4615.57	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=15.821;DP=473;FS=0.000;HRun=0;HaplotypeScore=214.8607;InbreedingCoeff=0.9384;MQ=87.19;MQ0=0;MQRankSum=-15.552;QD=13.04;ReadPosRankSum=6.320;VQSLOD=5.1433;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:58:99:0,175,2419	1/1:1,3:4:11.28:60,11,0	0/0:31,0:31:87.26:0,87,1175	0/0:30,0:30:87.26:0,87,1164	1/1:0,7:7:10.83:47,11,0	1/1:1,10:11:30.93:155,31,0	1/1:1,12:13:36.14:176,36,0	1/1:1,15:16:47.39:319,47,0	1/1:0,27:27:75.55:365,76,0	1/1:0,11:11:30.40:187,30,0	1/1:1,12:13:23.89:107,24,0	1/1:1,20:21:53.85:253,54,0	1/1:1,16:17:44.99:229,45,0	1/1:2,19:21:56.70:263,57,0	1/1:1,21:22:61.16:284,61,0	1/1:0,15:15:41.39:194,41,0	1/1:0,8:8:19.63:97,20,0	1/1:0,10:10:26.50:168,26,0	1/1:1,6:7:17.82:122,18,0	1/1:1,19:20:52.44:237,52,0	1/1:0,17:17:36.59:182,37,0	1/1:0,11:11:24.99:119,25,0	1/1:2,5:7:8.14:40,8,0	1/1:1,11:12:19.50:95,20,0	1/1:0,19:19:50.53:240,51,0	1/1:2,16:19:49.48:298,49,0	1/1:2,18:20:55.31:280,55,0	1/1:0,6:6:17.44:98,17,0
chr10	18688288	.	TA	T	4533.95	PASS	AB=0.500;AC=49;AF=0.875;AN=56;BaseQRankSum=15.235;DP=479;FS=1.804;HRun=1;HaplotypeScore=216.2078;InbreedingCoeff=0.8523;MQ=86.88;MQ0=0;MQRankSum=-14.971;QD=12.56;ReadPosRankSum=7.348;VQSLOD=3.8005;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:57:99:0,169,2674	1/1:0,3:3:8.26:37,8,0	0/0:31,0:31:72.71:0,73,1330	0/0:30,0:30:81.19:0,81,1198	0/1:0,9:9:1.20:40,0,1	1/1:1,10:11:30.78:153,31,0	1/1:0,12:12:33.24:152,33,0	1/1:1,15:16:47.46:323,47,0	1/1:0,27:27:74.90:349,75,0	1/1:0,11:11:30.78:190,31,0	1/1:1,12:13:20.88:81,21,0	1/1:1,20:21:52.82:243,53,0	1/1:1,16:17:44.58:218,45,0	1/1:0,20:20:49.96:213,50,0	1/1:0,21:21:57.85:259,58,0	1/1:1,15:16:44.36:214,44,0	1/1:3,8:11:22.49:117,22,0	1/1:0,10:10:26.45:164,26,0	1/1:0,6:6:17.82:122,18,0	1/1:2,19:21:52.80:253,53,0	1/1:1,17:18:36.59:184,37,0	1/1:1,11:12:24.88:131,25,0	1/1:4,5:9:8.14:47,8,0	1/1:2,11:13:22.24:119,22,0	1/1:1,19:20:52.55:240,53,0	1/1:2,17:19:55.58:347,56,0	1/1:1,18:19:49.51:240,50,0	1/1:0,6:6:17.47:99,17,0
chr10	18690481	.	ATC	A	1701.40	PASS	AB=0.837;AC=12;AF=0.231;AN=52;BaseQRankSum=5.189;DP=706;FS=22.934;HRun=0;HaplotypeScore=209.9734;InbreedingCoeff=-0.2739;MQ=41.67;MQ0=26;MQRankSum=1.298;QD=5.16;ReadPosRankSum=-0.374;VQSLOD=1.6171;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:19:22.52:0,23,339	0/1:10,1:11:23.89:24,0,251	./.	./.	0/1:23,7:28:99:197,0,476	0/0:31,0:29:28.30:0,28,372	0/0:12,0:8:15.05:0,15,215	0/0:63,0:55:99:0,153,1954	0/1:15,2:15:5.11:52,0,5	0/1:26,12:34:99:303,0,845	0/1:22,8:27:48.04:48,0,568	0/0:23,0:19:29.12:0,29,392	0/1:27,5:27:99:267,0,163	0/1:16,11:23:99:198,0,180	0/0:48,0:40:49.64:0,50,769	0/0:33,0:25:36.09:0,36,534	0/1:20,3:21:66.87:67,0,276	0/0:18,0:16:25.68:0,26,312	0/0:16,0:13:33.05:0,33,458	0/0:30,0:26:20.67:0,21,281	0/0:14,0:13:11.56:0,12,257	0/0:22,0:17:18.03:0,18,257	0/1:29,8:31:99:213,0,416	0/0:8,0:6:3.01:0,3,43	0/0:36,0:27:49.69:0,50,661	0/1:30,0:22:99:125,0,681	0/1:30,12:32:99:279,0,491	0/1:10,3:12:75.38:75,0,339
chr10	18690483	.	C	CTA	2631	PASS	AB=0.875;AC=13;AF=0.250;AN=52;BaseQRankSum=2.626;DP=703;FS=21.432;HRun=0;HaplotypeScore=208.4099;InbreedingCoeff=-0.1470;MQ=41.55;MQ0=27;MQRankSum=0.175;QD=7.90;ReadPosRankSum=-0.063;VQSLOD=1.7617;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:18:27.06:0,27,364	0/1:9,2:11:25.55:26,0,218	./.	./.	0/1:28,2:28:99:286,0,356	0/0:31,0:29:21.19:0,21,316	0/0:13,0:9:14.08:0,14,176	0/0:61,0:53:99:0,131,1594	1/1:11,8:17:22.88:310,23,0	0/1:36,2:34:99:428,0,620	0/1:25,5:27:49.10:49,0,473	0/0:24,0:20:31.33:0,31,370	0/1:24,8:28:99:351,0,176	0/1:24,3:23:95.39:201,0,95	0/0:47,0:39:43.76:0,44,635	0/0:33,0:25:29.96:0,30,424	0/1:20,2:20:65.04:65,0,214	0/0:17,0:15:24.37:0,24,244	0/0:14,0:11:30.08:0,30,380	0/0:29,0:25:27.09:0,27,365	0/0:14,0:13:26.69:0,27,319	0/0:22,0:17:18.06:0,18,256	0/1:30,8:32:99:336,0,359	0/0:7,2:6:3.01:0,3,43	0/0:35,0:26:42.61:0,43,480	0/1:20,10:22:99:191,0,574	0/1:34,7:31:99:430,0,369	0/1:14,0:13:99:112,0,289
chr10	18690485	.	ATC	A	387.78	PASS	AB=1.000;AC=3;AF=0.056;AN=54;BaseQRankSum=5.131;DP=695;FS=1.653;HRun=0;HaplotypeScore=216.3515;InbreedingCoeff=0.4961;MQ=40.27;MQ0=27;MQRankSum=-3.807;QD=7.76;ReadPosRankSum=0.898;VQSLOD=3.3286;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:17:22.51:0,23,340	0/0:11,0:11:19.86:0,20,259	./.	0/0:1,0:1:3.01:0,3,34	0/0:30,0:28:42.77:0,43,525	0/1:31,0:29:0.37:0,0,321	0/0:12,0:8:13.21:0,13,190	0/0:58,0:50:99:0,131,1612	1/1:15,4:17:34.34:481,34,0	0/0:36,0:32:71.78:0,72,954	0/0:31,0:28:37.28:0,37,595	0/0:24,0:20:29.07:0,29,366	0/0:33,0:28:12.91:0,13,222	0/0:27,0:23:15.23:0,15,199	0/0:49,0:41:46.15:0,46,725	0/0:33,0:25:34.65:0,35,496	0/0:21,0:19:5.74:0,6,283	0/0:18,0:16:14.49:0,14,273	0/0:14,0:11:29.96:0,30,368	0/0:28,0:24:17.67:0,18,256	0/0:13,0:12:8.56:0,9,232	0/0:22,0:17:18.03:0,18,257	0/0:38,0:32:47.55:0,48,463	0/0:9,0:6:3.01:0,3,43	0/0:33,0:24:43.51:0,44,498	0/0:30,0:22:50.11:0,50,812	0/0:41,0:31:24.57:0,25,588	0/0:14,0:13:14.86:0,15,350
chr10	18690487	.	CTA	C	180.64	PASS	AB=1.000;AC=3;AF=0.056;AN=54;BaseQRankSum=5.393;DP=696;FS=0.000;HRun=0;HaplotypeScore=218.5298;InbreedingCoeff=0.4700;MQ=40.22;MQ0=28;MQRankSum=-3.573;QD=3.54;ReadPosRankSum=-0.409;VQSLOD=2.6911;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:17:22.50:0,23,340	0/0:11,0:11:18.06:0,18,259	./.	0/0:1,0:1:3.01:0,3,37	0/0:28,0:26:48.13:0,48,671	0/1:32,0:30:21.28:21,0,300	0/0:12,0:9:12.14:0,12,188	0/0:48,0:48:99:0,126,1456	1/1:19,0:17:31.19:264,31,0	0/0:37,0:33:81.15:0,81,1180	0/0:31,0:28:40.18:0,40,644	0/0:22,2:20:23.10:0,23,318	0/0:33,0:28:36.74:0,37,400	0/0:27,0:23:27.01:0,27,320	0/0:45,4:41:49.17:0,49,766	0/0:29,4:25:34.63:0,35,494	0/0:22,0:20:23.09:0,23,320	0/0:17,0:16:16.21:0,16,285	0/0:13,0:10:26.94:0,27,287	0/0:28,0:24:17.98:0,18,256	0/0:12,0:12:8.56:0,9,214	0/0:19,3:17:18.03:0,18,257	0/0:37,0:31:54.12:0,54,627	0/0:9,0:6:3.01:0,3,43	0/0:31,2:24:35.24:0,35,393	0/0:31,0:23:65.74:0,66,927	0/0:42,0:32:58.71:0,59,810	0/0:14,0:13:29.07:0,29,382
chr10	18690494	.	TC	T	668.11	PASS	AB=0.886;AC=4;AF=0.074;AN=54;BaseQRankSum=2.888;DP=690;FS=5.850;HRun=1;HaplotypeScore=213.6105;InbreedingCoeff=-0.0970;MQ=40.32;MQ0=29;MQRankSum=-6.923;QD=5.76;ReadPosRankSum=-2.437;VQSLOD=-0.6039;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:18:28.09:0,28,354	0/0:10,0:10:18.05:0,18,254	./.	0/0:5,0:2:5.75:0,6,53	0/0:25,0:23:42.06:0,42,641	0/0:32,0:30:25.60:0,26,391	0/0:14,0:9:8.68:0,9,181	0/1:40,16:48:99:493,0,928	0/0:17,0:15:31.92:0,32,477	0/0:33,0:29:78.26:0,78,1193	0/0:28,0:25:31.63:0,32,510	0/0:23,0:19:32.85:0,33,418	0/0:33,0:28:38.81:0,39,542	0/0:28,0:24:27.09:0,27,409	0/0:47,0:39:49.17:0,49,748	0/0:33,0:25:35.71:0,36,534	0/0:22,0:20:26.51:0,27,377	0/1:19,0:17:42.29:42,0,192	0/1:9,4:9:42.27:218,0,42	0/1:28,0:24:22.16:22,0,203	0/0:12,0:11:17.01:0,17,222	0/0:21,0:16:10.97:0,11,180	0/0:33,0:27:39.13:0,39,574	0/0:9,0:6:3.01:0,3,46	0/0:31,0:22:35.72:0,36,524	0/0:30,0:22:63.21:0,63,955	0/0:49,0:39:63.21:0,63,984	0/0:15,0:14:30.10:0,30,468
chr10	18690501	.	A	ATC	811.19	PASS	AB=0.942;AC=8;AF=0.148;AN=54;BaseQRankSum=-2.646;DP=679;FS=1.608;HRun=0;HaplotypeScore=215.0074;InbreedingCoeff=0.0350;MQ=39.03;MQ0=28;MQRankSum=0.935;QD=4.27;ReadPosRankSum=-0.749;VQSLOD=2.7001;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:16:30.03:0,30,345	0/0:8,0:8:5.99:0,6,65	0/0:8,0:3:3.01:0,3,42	0/0:5,0:2:5.91:0,6,52	0/0:24,0:22:36.12:0,36,501	0/1:27,4:29:23.08:23,0,193	1/1:12,1:8:8.97:132,9,0	0/0:48,0:41:97.20:0,97,1254	0/0:18,0:16:30.56:0,31,395	0/0:37,0:33:78.23:0,78,1031	0/0:31,0:28:24.95:0,25,327	0/1:19,2:17:99:110,0,112	0/0:34,0:29:16.56:0,17,299	0/0:28,0:24:23.86:0,24,276	0/1:42,3:37:99:334,0,140	0/0:29,0:21:19.43:0,19,263	0/0:24,0:22:18.37:0,18,220	0/1:18,1:17:76.13:76,0,168	0/0:15,0:11:27.03:0,27,285	0/0:30,0:26:45.04:0,45,503	0/0:10,0:9:16.52:0,17,120	0/0:19,2:16:3.01:0,3,30	0/1:34,0:28:42.35:42,0,307	./.	0/1:26,1:18:36.33:228,0,36	0/0:27,0:19:54.17:0,54,752	0/0:50,0:40:57.12:0,57,747	0/0:17,0:16:24.05:0,24,303
chr10	18690503	.	CTA	C	396.59	PASS	AB=0.843;AC=8;AF=0.148;AN=54;BaseQRankSum=-2.605;DP=671;FS=0.000;HRun=0;HaplotypeScore=216.1655;InbreedingCoeff=0.0648;MQ=38.57;MQ0=28;MQRankSum=2.780;QD=2.39;ReadPosRankSum=-1.241;VQSLOD=2.4259;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:16:28.06:0,28,387	0/0:8,0:8:6.02:0,6,102	0/0:9,0:3:8.98:0,9,103	0/0:5,0:2:5.99:0,6,64	0/0:24,0:22:36.12:0,36,578	0/1:24,7:29:14.30:14,0,180	1/1:12,1:8:6.88:63,7,0	0/0:46,0:39:99:0,104,1295	0/0:18,0:16:32.28:0,32,437	0/0:39,0:35:87.15:0,87,1261	0/0:28,0:25:22.53:0,23,384	0/1:16,4:16:99:102,0,105	0/0:32,0:28:23.85:0,24,354	0/0:28,0:24:24.06:0,24,323	0/1:38,8:38:99:112,0,157	0/0:29,0:21:30.45:0,30,332	0/0:23,0:21:17.64:0,18,249	0/1:15,4:17:21.46:21,0,217	0/0:15,0:11:30:0,30,332	0/0:30,0:26:38.17:0,38,377	0/1:10,0:9:0.49:0,0,65	0/0:15,4:14:5.30:0,5,33	0/0:31,0:27:19.92:0,20,402	./.	0/1:17,10:19:27.66:210,0,28	0/0:27,0:19:54.17:0,54,869	0/0:51,0:41:57.19:0,57,971	0/0:15,0:14:24.05:0,24,353
chr10	18690505	.	ATCTAT	A	978.32	PASS	AB=0.933;AC=16;AF=0.296;AN=54;BaseQRankSum=3.627;DP=666;FS=1.043;HRun=0;HaplotypeScore=231.2340;InbreedingCoeff=0.3453;MQ=38.39;MQ0=28;MQRankSum=-4.253;QD=3.49;ReadPosRankSum=-6.813;VQSLOD=0.6468;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:15:26.37:0,26,326	0/0:7,0:8:6.02:0,6,85	0/0:10,0:4:12.04:0,12,176	0/0:5,0:2:5.84:0,6,39	0/0:26,0:24:33.77:0,34,501	0/1:31,0:29:3.41:67,0,3	1/1:12,0:7:11:84,11,0	0/0:43,0:36:95.03:0,95,1054	0/0:18,0:16:1.77:0,2,289	0/0:38,0:34:78.18:0,78,991	0/0:29,0:26:29.84:0,30,266	1/1:21,0:17:3.34:151,3,0	0/1:25,7:29:91.19:91,0,333	0/0:28,0:24:16.72:0,17,282	1/1:46,0:38:16.57:247,17,0	0/1:26,0:21:44.77:45,0,95	0/0:23,0:21:22.40:0,22,203	0/1:19,0:17:99:106,0,122	0/0:12,0:11:22.94:0,23,176	0/0:30,0:26:6.24:0,6,136	0/1:9,0:8:19.81:20,0,54	1/1:19,0:14:4.59:34,5,0	0/1:25,5:27:99:121,0,420	./.	1/1:27,0:18:16.72:184,17,0	0/0:26,0:18:9.08:0,9,514	0/0:51,0:41:68.50:0,69,946	0/0:15,0:14:18.06:0,18,302
chr10	18690507	.	CTAT	C	4250.88	PASS	AB=0.988;AC=25;AF=0.446;AN=56;BaseQRankSum=0.067;DP=671;FS=24.937;HRun=0;HaplotypeScore=215.5226;InbreedingCoeff=0.2236;MQ=38.49;MQ0=26;MQRankSum=-1.521;QD=9.51;ReadPosRankSum=-5.339;VQSLOD=1.9845;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:5.43:0,5,256	0/0:9,0:9:5.98:0,6,64	0/0:10,0:4:12.04:0,12,167	0/0:6,0:3:7.24:0,7,58	0/0:27,0:25:12.07:0,12,396	1/1:26,5:29:50.89:679,51,0	1/1:12,0:7:10.74:105,11,0	0/1:42,0:37:99:197,0,613	0/1:18,0:16:99:104,0,135	0/0:36,0:32:76.16:0,76,892	0/0:29,0:26:27.50:0,28,212	1/1:21,1:18:31.69:437,32,0	0/1:34,0:29:8.53:9,0,292	0/1:29,0:25:10.24:10,0,310	1/1:48,1:41:77.82:886,78,0	0/1:28,1:21:15.97:218,0,16	0/1:22,0:20:49.03:49,0,113	0/1:17,2:17:14.84:333,0,15	0/1:12,0:11:19.81:148,0,20	1/1:30,0:26:27.81:368,28,0	0/1:8,0:7:10.69:37,0,11	1/1:21,0:16:24.08:335,24,0	0/1:35,0:29:19.90:20,0,376	0/1:8,0:5:0:0,0,0	1/1:25,1:17:26.72:316,27,0	0/0:26,0:18:42.26:0,42,492	0/0:51,0:41:55.51:0,56,707	0/0:13,0:12:14.94:0,15,227
chr10	18690510	.	T	TC	4864.57	PASS	AB=0.762;AC=25;AF=0.446;AN=56;BaseQRankSum=0.054;DP=674;FS=21.218;HRun=0;HaplotypeScore=209.6832;InbreedingCoeff=0.2092;MQ=37.94;MQ0=23;MQRankSum=-2.427;QD=10.91;ReadPosRankSum=-3.062;VQSLOD=2.9416;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:17:10.69:0,11,281	0/0:7,1:8:5.98:0,6,53	0/0:13,0:6:15.02:0,15,189	0/0:7,0:3:7.24:0,7,58	0/0:27,0:25:10.13:0,10,326	1/1:13,18:29:50.95:682,51,0	1/1:7,4:6:8.24:96,8,0	0/1:35,8:40:99:336,0,596	0/1:7,14:19:99:160,0,99	0/0:35,0:31:27.29:0,27,758	0/0:30,0:28:9.46:0,9,169	1/1:6,17:20:43.83:549,44,0	0/1:32,3:30:33.20:33,0,246	0/1:21,1:25:27.12:27,0,292	1/1:13,31:37:66.92:839,67,0	0/1:13,14:20:12.04:259,0,12	0/1:12,6:19:65.39:65,0,125	0/1:7,12:17:9.75:360,0,10	0/1:6,4:12:23.02:229,0,23	1/1:6,25:27:30.16:400,30,0	0/1:4,2:5:18.27:27,0,18	1/1:4,17:16:24.08:333,24,0	0/1:30,5:29:99:102,0,302	0/1:8,0:5:0:0,0,0	1/1:4,21:17:26.84:367,27,0	0/0:25,0:19:23.59:0,24,385	0/0:50,0:40:38.83:0,39,528	0/0:11,1:11:14.08:0,14,174
chr10	18690530	.	TACCTA	T	126.69	PASS	AB=0.903;AC=4;AF=0.071;AN=56;BaseQRankSum=4.482;DP=684;FS=0.000;HRun=0;HaplotypeScore=240.8595;InbreedingCoeff=0.3001;MQ=38.64;MQ0=15;MQRankSum=-5.179;QD=2.70;ReadPosRankSum=-2.797;VQSLOD=1.9200;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:17:29.48:0,29,695	0/0:11,0:11:13.51:0,14,221	0/0:24,0:9:26.93:0,27,734	0/0:14,0:5:11.73:0,12,345	0/0:32,0:30:39.13:0,39,970	0/0:34,0:32:75.02:0,75,1857	0/0:10,0:7:17.96:0,18,496	0/0:32,0:32:96.33:0,96,2934	0/1:19,6:23:99:184,0,329	0/0:37,0:33:84.17:0,84,2309	0/0:29,0:27:23.05:0,23,560	0/0:25,0:22:46.90:0,47,1352	0/0:35,0:30:42.08:0,42,1025	0/0:28,0:25:46.25:0,46,1048	0/0:42,0:34:63.91:0,64,1705	0/0:30,0:22:35.94:0,36,980	0/0:18,0:16:13.83:0,14,273	0/1:15,0:14:13.79:14,0,724	0/0:14,0:14:3.69:0,4,1049	0/0:27,0:24:15.14:0,15,769	1/1:6,0:6:1.58:27,2,0	0/0:24,0:19:42.06:0,42,1162	0/0:30,0:26:37.46:0,37,1007	0/0:9,0:6:0:0,0,0	0/0:27,0:20:38.04:0,38,767	0/0:21,0:14:39.13:0,39,1129	0/0:47,0:37:53.06:0,53,1563	0/0:15,0:14:26.93:0,27,477
chr10	18690545	.	T	TTCTCTCTA	9082.62	PASS	AB=0.737;AC=29;AF=0.537;AN=54;BaseQRankSum=1.378;DP=649;FS=21.455;HRun=0;HaplotypeScore=217.0002;InbreedingCoeff=0.7785;MQ=42.37;MQ0=12;MQRankSum=-2.934;QD=22.76;ReadPosRankSum=-2.148;VQSLOD=2.2272;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:16,0:24:27.70:28,0,63	1/1:1,11:13:17.92:393,18,0	0/0:23,0:11:26.79:0,27,301	0/0:11,0:5:11.98:0,12,188	1/1:8,23:33:42.46:743,42,0	0/0:29,0:28:60.04:0,60,1358	0/0:13,0:11:24.04:0,24,591	0/0:36,0:36:76.12:0,76,738	1/1:14,0:22:29.88:484,30,0	1/1:13,20:34:87.12:2230,87,0	1/1:3,23:26:14.83:317,15,0	0/0:20,0:19:26.73:0,27,909	1/1:12,17:29:42.08:1080,42,0	1/1:12,12:23:30.03:699,30,0	0/0:33,0:28:54.15:0,54,1383	0/0:18,0:16:36.10:0,36,886	1/1:5,8:19:11.25:108,11,0	0/0:15,0:18:8.90:0,9,725	0/1:14,0:16:52.35:52,0,189	1/1:21,0:25:30.03:349,30,0	0/1:2,0:4:2.95:3,0,20	0/0:19,0:18:36.11:0,36,916	1/1:10,17:27:36.52:595,37,0	./.	0/0:18,0:13:27.07:0,27,624	1/1:14,0:10:29.96:581,30,0	1/1:16,27:45:38.98:764,39,0	1/1:4,10:14:18.01:656,18,0
chr10	18690567	.	C	CATT	1850.80	PASS	AB=0.722;AC=5;AF=0.093;AN=54;BaseQRankSum=-1.559;DP=620;FS=7.671;HRun=0;HaplotypeScore=169.3807;InbreedingCoeff=0.3162;MQ=49.53;MQ0=5;MQRankSum=-3.156;QD=22.85;ReadPosRankSum=-4.988;VQSLOD=1.6190;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:44.54:0,45,725	0/0:13,0:13:18.06:0,18,252	0/0:18,0:8:17.78:0,18,236	0/0:13,0:8:14.36:0,14,202	0/0:29,0:29:33.48:0,33,541	0/0:33,0:32:75.23:0,75,1333	0/0:11,0:11:27.09:0,27,502	0/1:15,19:36:99:1137,0,518	0/0:26,0:25:52.22:0,52,660	0/0:35,0:35:97.37:0,97,1102	0/0:27,0:27:24.86:0,25,354	0/0:18,0:17:41.99:0,42,745	0/0:28,0:27:27.01:0,27,333	0/0:20,0:20:22.68:0,23,297	0/0:32,0:32:66.21:0,66,1191	0/0:21,0:21:51.16:0,51,919	0/0:20,0:20:15.19:0,15,221	0/0:23,0:23:50.22:0,50,1074	0/1:9,1:8:99:230,0,144	1/1:15,15:25:50.89:575,51,0	0/1:2,2:5:30.93:31,0,36	0/0:16,0:16:42.14:0,42,754	0/0:28,0:28:43.95:0,44,684	./.	0/0:16,0:15:36.11:0,36,633	0/0:21,0:17:48.13:0,48,732	0/0:45,0:40:38.63:0,39,581	0/0:13,0:12:8.60:0,9,43
chr10	18691034	.	AGTGTACT	A	25383.95	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=7.348;DP=618;FS=11.190;HRun=0;HaplotypeScore=173.8027;InbreedingCoeff=0.9986;MQ=81.50;MQ0=0;MQRankSum=-18.735;QD=62.68;ReadPosRankSum=4.039;VQSLOD=4.3022;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,132,5080	1/1:1,9:10:24.08:632,24,0	0/0:30,0:30:87.26:0,87,2988	0/0:18,0:18:42.13:0,42,1519	1/1:0,15:15:42.03:853,42,0	1/1:0,16:16:48.16:1265,48,0	1/1:1,23:24:69.24:1779,69,0	0/0:42,0:42:99:0,120,4041	1/1:1,13:14:39.13:1028,39,0	1/1:0,24:24:69.24:1796,69,0	1/1:0,15:15:36.08:808,36,0	1/1:1,28:29:69.24:1817,69,0	1/1:1,21:22:48.16:1264,48,0	1/1:2,28:30:69.19:1721,69,0	1/1:0,18:18:42.14:1107,42,0	1/1:0,24:24:66.23:1702,66,0	1/1:3,20:23:39.13:1028,39,0	1/1:0,16:16:33.07:745,33,0	0/0:14,0:14:42.14:0,42,1631	0/0:23,0:23:66.23:0,66,2617	0/0:42,0:42:99:0,126,4931	1/1:0,11:11:27.09:646,27,0	1/1:0,20:20:54.19:1418,54,0	1/1:1,18:19:36.05:804,36,0	1/1:0,16:16:45.15:1185,45,0	1/1:2,25:27:71.93:1810,72,0	1/1:0,22:22:54.19:1423,54,0	1/1:0,10:10:21.07:553,21,0
chr10	18692306	.	A	ACGCG	6180.25	PASS	AB=1.000;AC=50;AF=0.893;AN=56;BaseQRankSum=1.751;DP=608;FS=0.634;HRun=0;HaplotypeScore=179.4962;InbreedingCoeff=0.3568;MQ=48.48;MQ0=12;MQRankSum=4.455;QD=11.00;ReadPosRankSum=3.951;VQSLOD=4.4094;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:34,0:32:47.01:47,0,324	1/1:15,0:14:2.83:84,3,0	0/0:20,0:13:30.02:0,30,433	0/0:26,0:16:45.11:0,45,671	1/1:20,0:20:2.31:138,2,0	1/1:21,0:20:5.31:296,5,0	1/1:17,0:17:28.52:278,29,0	0/1:16,0:14:10.69:384,0,11	1/1:23,0:23:27.32:301,27,0	1/1:14,0:14:20.66:196,21,0	1/1:15,0:14:2.92:17,3,0	1/1:26,0:26:4.21:326,4,0	1/1:24,0:24:27.63:231,28,0	1/1:24,0:23:11.05:150,11,0	1/1:34,0:32:48:530,48,0	1/1:22,0:20:32.85:455,33,0	1/1:19,0:19:17.50:119,17,0	1/1:13,0:10:0.34:133,0,0	1/1:3,0:8:16.06:179,16,0	1/1:20,1:21:39.10:617,39,0	1/1:13,26:40:13.04:196,13,0	1/1:24,0:24:17.86:228,18,0	1/1:26,0:25:8.81:336,9,0	1/1:28,0:27:17.05:144,17,0	1/1:27,0:26:36.45:409,36,0	1/1:23,0:21:11.10:239,11,0	1/1:21,0:18:10.46:114,10,0	1/1:3,0:3:3.01:32,3,0
chr10	18692309	.	C	CGCGTGT	8202.35	PASS	AB=0.994;AC=38;AF=0.679;AN=56;BaseQRankSum=-1.952;DP=584;FS=15.491;HRun=0;HaplotypeScore=188.0606;InbreedingCoeff=0.3103;MQ=47.88;MQ0=15;MQRankSum=2.478;QD=16.98;ReadPosRankSum=4.577;VQSLOD=3.2083;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:33:50.83:0,51,859	1/1:14,1:14:13.62:249,14,0	0/0:15,0:11:30.10:0,30,695	0/0:24,0:15:45.13:0,45,981	1/1:13,0:14:20.99:481,21,0	0/1:18,0:18:20.86:150,0,21	0/1:16,0:16:17.40:121,0,17	0/0:16,0:14:12.49:0,12,297	1/1:19,0:19:11.67:156,12,0	1/1:5,7:14:20.66:531,21,0	1/1:14,0:13:3.01:56,3,0	0/1:25,0:25:66.96:170,0,67	1/1:22,0:22:33.11:781,33,0	1/1:24,0:23:33.11:697,33,0	0/1:30,0:28:22.44:234,0,22	1/1:23,0:21:13.45:238,13,0	1/1:18,1:19:20.02:480,20,0	0/1:14,0:11:8.12:60,0,8	0/0:11,0:8:8.43:0,8,80	0/1:21,0:19:5.98:6,0,117	0/1:41,0:39:6.57:7,0,160	0/1:22,0:22:53.28:97,0,53	1/1:24,1:24:47.59:1159,48,0	1/1:28,2:29:20.11:583,20,0	1/1:28,0:27:6.41:226,6,0	1/1:21,1:20:45.14:1102,45,0	1/1:22,0:19:23.25:516,23,0	1/1:3,0:3:3.01:104,3,0
chr10	18692310	.	GCA	G	768.12	PASS	AB=0.948;AC=26;AF=0.520;AN=50;BaseQRankSum=3.712;DP=571;FS=1.260;HRun=0;HaplotypeScore=175.6556;InbreedingCoeff=-0.2061;MQ=47.57;MQ0=15;MQRankSum=-3.849;QD=1.72;ReadPosRankSum=0.717;VQSLOD=2.6347;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:33:25.71:0,26,216	0/1:14,0:13:1.41:1,0,9	./.	./.	0/1:14,0:14:14.37:14,0,27	0/1:18,1:18:3.76:4,0,72	0/1:13,2:16:54.04:66,0,54	0/0:16,0:14:5.91:0,6,59	1/1:7,10:19:14.87:143,15,0	0/1:10,0:10:0.13:7,0,0	1/1:14,0:13:1.82:5,2,0	0/1:22,3:25:64.47:69,0,64	1/1:21,0:21:2.14:38,2,0	0/1:24,0:23:13.53:26,0,14	0/1:24,5:27:60.53:159,0,61	0/1:20,3:21:22.55:91,0,23	1/1:17,0:17:16.61:92,17,0	0/0:14,0:11:12.55:0,13,48	0/1:11,0:8:10.12:10,0,57	0/0:19,0:17:20.94:0,21,179	0/1:41,1:40:10.88:11,0,157	0/1:19,2:22:20.18:20,0,92	0/1:24,1:24:16.67:17,0,27	1/1:31,0:30:13.08:71,13,0	0/1:26,2:27:24.82:25,0,67	0/1:22,0:19:9.35:9,0,30	0/1:20,0:17:3.29:39,0,3	./.
chr10	18692311	.	C	CGT	6810.19	PASS	AB=1.000;AC=46;AF=0.821;AN=56;BaseQRankSum=5.901;DP=547;FS=3.383;HRun=0;HaplotypeScore=155.8845;InbreedingCoeff=0.6286;MQ=47.93;MQ0=17;MQRankSum=2.947;QD=15.99;ReadPosRankSum=6.065;VQSLOD=4.9147;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:34:50.39:0,50,582	1/1:12,0:13:14.35:168,14,0	0/0:17,0:11:30.10:0,30,457	0/0:26,0:15:45.10:0,45,623	1/1:7,2:11:15.29:211,15,0	1/1:16,2:17:22.56:298,23,0	1/1:14,0:14:20.45:269,20,0	0/1:15,0:13:21.17:21,0,95	1/1:19,0:19:32.16:364,32,0	1/1:9,1:10:14.89:167,15,0	1/1:4,1:12:3.01:51,3,0	1/1:25,0:25:28.90:439,29,0	1/1:1,11:19:29.98:416,30,0	1/1:3,12:20:27.72:383,28,0	1/1:28,0:26:69.42:652,69,0	1/1:22,0:20:40.34:489,40,0	1/1:3,13:17:19.78:326,20,0	1/1:15,0:12:7.93:151,8,0	0/1:10,0:7:23.19:23,0,32	1/1:19,0:17:11.65:110,12,0	0/0:42,0:40:5.87:0,6,67	1/1:20,0:20:17.76:244,18,0	1/1:14,8:24:37.98:526,38,0	1/1:6,21:28:17.74:289,18,0	1/1:26,0:26:55.23:532,55,0	1/1:10,5:15:22.34:396,22,0	1/1:1,11:15:15.88:254,16,0	1/1:2,0:2:3.01:31,3,0
chr10	18692313	.	C	CGT	3543.23	PASS	AB=1.000;AC=34;AF=0.607;AN=56;BaseQRankSum=4.321;DP=547;FS=3.244;HRun=0;HaplotypeScore=168.8349;InbreedingCoeff=0.4060;MQ=47.19;MQ0=21;MQRankSum=2.815;QD=9.76;ReadPosRankSum=4.288;VQSLOD=3.1858;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:33:50.03:0,50,588	1/1:3,9:12:6.73:142,7,0	0/0:18,0:9:27.06:0,27,368	0/0:30,0:14:39.13:0,39,574	1/1:10,0:10:15.51:207,16,0	0/1:17,0:16:3.05:3,0,15	0/0:14,0:14:6.28:0,6,47	0/0:16,0:12:21.97:0,22,174	0/1:19,0:19:0.48:0,0,8	1/1:11,0:11:7.70:155,8,0	1/1:12,0:12:3.01:55,3,0	0/1:24,0:24:6.28:6,0,34	1/1:18,0:18:29.97:419,30,0	1/1:19,1:19:30.23:471,30,0	0/0:29,0:27:4.83:0,5,44	0/1:21,0:19:5.97:28,0,6	1/1:16,0:16:17.74:326,18,0	0/1:17,0:14:0.43:0,0,30	0/1:7,0:4:14.81:15,0,54	0/1:20,0:18:57.61:58,0,112	0/0:42,0:40:20.69:0,21,199	0/1:20,0:20:13.60:14,0,35	1/1:26,0:25:32.01:578,32,0	1/1:31,0:30:20.72:322,21,0	1/1:25,0:25:10.26:40,10,0	1/1:17,0:14:2.21:382,2,0	1/1:17,0:15:19.93:287,20,0	1/1:2,0:2:3.01:34,3,0
chr10	18693777	.	A	AG	18465.84	PASS	AB=1.000;AC=48;AF=0.857;AN=56;BaseQRankSum=0.831;DP=690;FS=6.683;HRun=2;HaplotypeScore=107.8521;InbreedingCoeff=0.4324;MQ=69.16;MQ0=0;MQRankSum=-0.631;QD=28.99;ReadPosRankSum=2.834;VQSLOD=4.2023;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,120,1428	1/1:0,20:20:54.18:720,54,0	0/0:10,0:11:19.98:0,20,240	0/1:6,0:6:8.50:9,0,45	1/1:0,27:27:78.17:1001,78,0	1/1:0,24:24:66.22:883,66,0	1/1:1,28:29:63.21:847,63,0	1/1:29,0:29:8.47:105,8,0	1/1:0,28:28:78.26:1041,78,0	1/1:2,22:24:62.32:778,62,0	1/1:0,15:15:39.13:521,39,0	1/1:1,29:30:78.26:1055,78,0	1/1:0,29:29:84.28:1130,84,0	1/1:1,28:29:75.25:1007,75,0	1/1:1,29:30:81.27:1085,81,0	1/1:1,24:25:57.19:769,57,0	1/1:1,29:30:66.22:890,66,0	1/1:1,23:24:57.19:763,57,0	0/1:26,0:26:16.74:62,0,17	0/1:17,0:17:25.81:30,0,26	0/1:29,0:29:19.16:48,0,19	1/1:0,23:23:60.14:789,60,0	1/1:1,24:25:63.20:838,63,0	1/1:1,18:19:49.04:647,49,0	1/1:0,24:24:63.19:838,63,0	1/1:2,33:35:99:1220,99,0	1/1:2,22:24:62.90:823,63,0	1/1:0,15:15:42.14:570,42,0
chr10	18695354	.	G	GT	3808.66	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-4.035;DP=498;FS=1.764;HRun=9;HaplotypeScore=64.8478;InbreedingCoeff=0.9871;MQ=84.28;MQ0=6;MQRankSum=-4.003;QD=27.40;ReadPosRankSum=0.171;VQSLOD=3.7410;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:56.84:0,57,483	0/0:9,0:9:20.99:0,21,182	0/0:25,0:26:28.71:0,29,387	0/0:18,0:16:10.06:0,10,157	0/0:18,0:18:34.70:0,35,378	1/1:2,17:19:28.09:538,28,0	1/1:5,23:28:57.09:615,57,0	0/0:31,0:31:68.73:0,69,579	0/0:19,0:18:38.98:0,39,339	0/0:11,0:11:26.98:0,27,230	0/0:13,0:11:20.79:0,21,169	1/1:2,11:13:36.08:389,36,0	0/0:16,0:15:40.20:0,40,336	0/0:15,0:15:32.94:0,33,278	1/1:1,10:11:33.08:357,33,0	1/1:3,5:8:21.05:225,21,0	0/0:20,0:19:47.99:0,48,417	1/1:8,19:27:52.51:723,53,0	0/0:22,0:22:50.93:0,51,433	0/0:17,0:17:35.98:0,36,312	0/0:18,0:18:41.62:0,42,330	1/1:2,6:8:18.05:198,18,0	0/0:23,0:23:62.96:0,63,541	0/0:12,0:12:23.99:0,24,208	1/1:4,21:25:69.19:763,69,0	0/0:20,0:19:21.77:0,22,364	0/0:14,0:14:38.95:0,39,331	0/0:15,0:15:29.97:0,30,255
chr10	18695420	.	GTT	G	11638.37	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=8.331;DP=478;FS=6.841;HRun=7;HaplotypeScore=67.2096;InbreedingCoeff=0.9856;MQ=74.40;MQ0=6;MQRankSum=-5.803;QD=32.51;ReadPosRankSum=6.525;VQSLOD=4.3053;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:54.15:0,54,864	1/1:0,6:6:18.06:229,18,0	0/0:27,0:24:28.91:0,29,695	0/0:14,0:13:38.99:0,39,567	1/1:1,23:24:66.21:837,66,0	1/1:2,16:18:48.15:611,48,0	1/1:6,15:21:51.09:581,51,0	0/0:18,0:19:51.17:0,51,863	1/1:0,12:11:33.09:406,33,0	1/1:0,23:23:69.20:865,69,0	1/1:1,23:22:57.18:725,57,0	1/1:1,13:14:36.11:455,36,0	1/1:3,17:19:8.92:569,9,0	1/1:1,13:14:30.09:380,30,0	1/1:1,10:11:27.09:344,27,0	1/1:1,11:12:30.10:382,30,0	1/1:2,14:15:39.12:497,39,0	1/1:0,25:25:72.15:882,72,0	0/0:18,0:18:51.16:0,51,860	0/0:16,0:16:45.15:0,45,777	0/0:7,0:7:21.07:0,21,367	1/1:0,18:18:51.16:649,51,0	1/1:0,15:15:39.12:497,39,0	1/1:0,10:10:21.07:268,21,0	1/1:2,17:19:51.16:648,51,0	1/1:0,20:19:57.17:710,57,0	1/1:1,21:22:56.69:723,57,0	1/1:0,14:14:30.10:382,30,0
chr10	18695462	.	T	TC	546.52	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-1.900;DP=540;FS=6.871;HRun=5;HaplotypeScore=90.0188;InbreedingCoeff=0.9854;MQ=80.96;MQ0=0;MQRankSum=-2.554;QD=26.02;ReadPosRankSum=-2.153;VQSLOD=2.0195;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:84.21:0,84,901	0/0:7,0:7:21.05:0,21,225	0/0:21,0:21:53.97:0,54,540	0/0:15,0:15:26.87:0,27,303	0/0:22,0:22:54.07:0,54,565	0/0:23,0:23:51.11:0,51,541	0/0:20,0:20:57.14:0,57,612	0/0:17,0:17:45.09:0,45,467	1/1:3,18:21:51.14:641,51,0	0/0:21,0:21:54.13:0,54,573	0/0:22,0:22:48.11:0,48,509	0/0:18,0:18:39.04:0,39,406	0/0:24,0:24:46.29:0,46,598	0/0:22,0:22:51.08:0,51,525	0/0:18,0:18:39.09:0,39,419	0/0:14,0:14:33.08:0,33,355	0/0:27,0:27:75.12:0,75,782	0/0:26,0:26:69.14:0,69,729	0/0:19,0:19:47.71:0,48,493	0/0:15,0:15:39.10:0,39,418	0/0:10,0:10:27.07:0,27,290	0/0:19,0:19:48.04:0,48,493	0/0:13,0:13:36.09:0,36,382	0/0:22,0:22:63.08:0,63,647	0/0:16,0:16:39.10:0,39,419	0/0:20,0:20:51.11:0,51,536	0/0:32,0:32:69.16:0,69,739	0/0:7,0:7:18.05:0,18,193
chr10	18695756	.	TG	T	2377.83	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=5.535;DP=511;FS=0.959;HRun=5;HaplotypeScore=58.1419;InbreedingCoeff=0.9752;MQ=75.84;MQ0=0;MQRankSum=1.031;QD=25.57;ReadPosRankSum=-2.607;VQSLOD=1.9324;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:78.26:0,78,1067	0/0:3,0:3:9.03:0,9,122	0/0:16,0:16:45.13:0,45,572	0/0:15,0:15:27.35:0,27,336	0/0:22,0:22:63.14:0,63,823	0/0:18,0:17:51.14:0,51,674	0/0:23,0:23:66.22:0,66,902	1/1:4,21:25:60.16:670,60,0	0/0:22,0:22:63.10:0,63,788	0/0:19,0:19:51.17:0,51,687	0/0:25,0:25:69.20:0,69,890	0/0:14,0:14:42.12:0,42,542	0/0:18,0:18:48.15:0,48,640	0/0:19,0:19:54.18:0,54,739	0/0:20,0:20:60.19:0,60,804	0/0:12,0:12:36.12:0,36,491	0/0:21,0:21:60.20:0,60,820	0/0:19,0:19:54.17:0,54,721	1/1:1,15:16:45.13:510,45,0	1/1:3,20:23:57.16:644,57,0	1/1:3,26:29:63.18:715,63,0	0/0:23,0:23:60.20:0,60,810	0/0:15,0:15:42.13:0,42,555	0/0:17,0:17:43.55:0,44,596	0/0:15,0:15:36.23:0,36,549	0/0:13,0:13:36.12:0,36,492	0/0:15,0:15:36.12:0,36,487	0/0:4,0:4:12.03:0,12,148
chr10	18697619	.	CA	C	5302.61	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=3.055;DP=759;FS=6.054;HRun=1;HaplotypeScore=139.7696;InbreedingCoeff=0.9993;MQ=79.81;MQ0=0;MQRankSum=-2.271;QD=37.34;ReadPosRankSum=-0.773;VQSLOD=3.8721;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,162,2374	0/0:9,0:9:24.08:0,24,363	0/0:24,0:24:72.17:0,72,995	0/0:21,0:21:57.61:0,58,797	0/0:27,0:27:72.15:0,72,1009	0/0:21,0:21:63.21:0,63,959	0/0:32,0:32:96.30:0,96,1426	1/1:0,27:27:78.21:1036,78,0	0/0:27,0:27:81.26:0,81,1213	0/0:37,0:37:96.20:0,96,1352	0/0:11,0:11:30.10:0,30,459	0/0:35,0:35:99:0,105,1585	0/0:28,0:28:84.23:0,84,1232	0/0:25,0:25:75.21:0,75,1102	0/0:27,0:27:78.25:0,78,1170	0/0:18,0:18:54.18:0,54,826	0/0:38,0:38:99:0,114,1722	0/0:29,0:29:87.28:0,87,1308	1/1:1,21:22:65.78:789,66,0	1/1:0,17:17:48.12:648,48,0	1/1:2,74:76:99:2831,205,0	0/0:31,0:31:81.15:0,81,1159	0/0:22,0:22:66.22:0,66,1002	0/0:22,0:22:63.11:0,63,846	0/0:24,0:24:72.24:0,72,1101	0/0:21,0:21:63.21:0,63,943	0/0:20,0:20:60.19:0,60,894	0/0:14,0:14:42.14:0,42,635
chr10	18700480	.	CTA	C	7034.49	PASS	AB=0.571;AC=49;AF=0.875;AN=56;BaseQRankSum=2.012;DP=345;FS=4.763;HRun=0;HaplotypeScore=45.0322;InbreedingCoeff=0.5528;MQ=85.10;MQ0=0;MQRankSum=-2.779;QD=23.06;ReadPosRankSum=1.882;VQSLOD=4.7555;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:30.10:0,30,506	1/1:2,2:4:6.02:77,6,0	0/0:11,0:10:1.63:0,2,39	0/0:16,0:12:13.38:0,13,87	1/1:2,12:14:27.09:347,27,0	1/1:4,19:23:51.17:656,51,0	1/1:2,6:8:6.02:77,6,0	1/1:2,24:26:69.20:858,69,0	1/1:3,7:10:15.05:193,15,0	1/1:4,5:9:15.03:178,15,0	1/1:3,6:9:6.02:77,6,0	1/1:4,7:11:21.07:270,21,0	1/1:2,9:11:21.07:270,21,0	1/1:5,6:11:12.04:154,12,0	1/1:3,2:5:6.02:77,6,0	1/1:1,8:9:18.06:232,18,0	1/1:3,22:25:8.49:714,8,0	1/1:0,18:18:39.13:502,39,0	1/1:5,10:15:27.09:347,27,0	1/1:2,8:10:18.06:231,18,0	1/1:1,5:6:15.05:193,15,0	1/1:5,4:9:3.01:39,3,0	1/1:6,2:8:3.01:39,3,0	0/1:2,6:8:7.90:104,0,8	1/1:2,12:14:33:424,33,0	1/1:4,5:9:15.05:193,15,0	1/1:5,9:14:21.07:270,21,0	1/1:0,19:19:41.80:512,42,0
chr10	18701259	.	TACCACCACCACCACC	T	6064.92	PASS	AB=0.795;AC=32;AF=0.667;AN=48;BaseQRankSum=6.681;DP=410;FS=11.072;HRun=0;HaplotypeScore=193.5276;InbreedingCoeff=0.1504;MQ=66.44;MQ0=3;MQRankSum=-2.691;QD=20.22;ReadPosRankSum=-0.788;VQSLOD=2.8439;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:6:6.91:0,7,262	1/1:3,6:9:0.53:240,1,0	./.	./.	1/1:12,0:12:2.99:24,3,0	0/1:10,0:12:10.96:96,0,11	0/1:13,0:15:74.93:90,0,75	0/0:13,0:13:1.82:0,2,5	1/1:14,0:21:21.07:727,21,0	./.	1/1:7,4:11:3.01:124,3,0	0/1:11,0:22:38.50:433,0,39	1/1:9,5:14:9.03:372,9,0	1/1:17,6:23:15.05:619,15,0	0/1:14,0:21:71.38:382,0,71	1/1:10,0:16:1.08:298,1,0	1/1:9,10:19:12.04:496,12,0	0/1:19,0:21:82.76:83,0,213	0/0:6,0:7:3.90:0,4,199	0/0:9,0:9:6.02:0,6,279	0/0:9,0:8:9.01:0,9,371	0/1:12,0:21:46.92:242,0,47	1/1:13,4:17:12.04:496,12,0	./.	1/1:8,0:11:6.02:106,6,0	1/1:8,4:12:11.99:295,12,0	1/1:8,7:15:11.06:447,11,0	1/1:2,4:7:12.04:496,12,0
chr10	18702122	.	GGGGGA	G	23570.27	PASS	AB=1.000;AC=46;AF=0.821;AN=56;BaseQRankSum=-4.733;DP=631;FS=2.113;HRun=0;HaplotypeScore=163.7906;InbreedingCoeff=0.6972;MQ=78.07;MQ0=1;MQRankSum=-11.174;QD=44.47;ReadPosRankSum=8.104;VQSLOD=4.8008;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:24:3.20:9,3,0	1/1:1,15:16:39.13:806,39,0	0/0:20,0:20:51.16:0,51,1289	0/0:31,0:31:81.20:0,81,1961	1/1:1,26:27:51.13:1014,51,0	1/1:1,15:16:39.13:807,39,0	1/1:3,29:32:72.25:1489,72,0	0/1:12,0:12:16.14:16,0,124	1/1:0,23:23:54.14:1075,54,0	1/1:0,14:14:42.12:802,42,0	1/1:1,4:5:3.01:62,3,0	1/1:1,33:34:99:2104,102,0	1/1:5,24:29:63.10:1303,63,0	1/1:4,35:39:96.33:1985,96,0	1/1:4,32:36:81.23:1634,81,0	1/1:2,27:29:78.27:1614,78,0	1/1:1,33:34:93.32:1926,93,0	1/1:0,16:16:39.13:808,39,0	0/1:8,0:8:8.82:9,0,54	0/0:7,0:7:7.87:0,8,39	0/0:43,0:42:40.27:0,40,254	1/1:2,13:15:24.08:497,24,0	1/1:2,14:16:33.11:681,33,0	1/1:3,27:30:56.94:1180,57,0	1/1:0,18:18:36.12:740,36,0	1/1:1,28:29:81.23:1559,81,0	1/1:2,18:20:48.12:952,48,0	1/1:0,8:8:24.08:497,24,0
chr10	18702124	.	GGGA	G	11859.65	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=4.496;DP=626;FS=0.000;HRun=0;HaplotypeScore=184.1102;InbreedingCoeff=0.8714;MQ=80.04;MQ0=1;MQRankSum=-10.828;QD=20.73;ReadPosRankSum=7.022;VQSLOD=4.1657;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,21:23:39.07:619,39,0	1/1:16,0:16:38.54:352,39,0	0/0:23,0:23:57.17:0,57,1045	0/0:31,0:31:80.96:0,81,1374	1/1:27,0:27:50.99:455,51,0	1/1:15,0:15:39.02:354,39,0	1/1:32,0:32:72.04:651,72,0	1/1:13,0:13:9.07:157,9,0	1/1:23,0:23:54:481,54,0	1/1:14,0:14:41.99:372,42,0	1/1:6,0:6:3:27,3,0	1/1:34,0:34:99:935,102,0	1/1:28,0:28:62.91:571,63,0	1/1:38,0:38:96.04:868,96,0	1/1:33,0:33:81.01:726,81,0	1/1:29,0:29:78.04:706,78,0	1/1:33,0:33:93.05:845,93,0	1/1:16,0:16:38.94:353,39,0	1/1:7,1:8:20.15:155,20,0	1/1:7,0:7:10.98:70,11,0	1/1:37,5:41:55.20:440,55,0	1/1:15,0:15:24.02:219,24,0	1/1:16,0:16:33.02:298,33,0	1/1:29,0:29:56.40:516,56,0	1/1:18,0:18:36:322,36,0	1/1:29,0:29:81.01:721,81,0	1/1:20,0:20:48:430,48,0	1/1:8,0:8:24.01:217,24,0
chr10	18702125	.	GGA	G	9995.70	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=5.372;DP=619;FS=0.000;HRun=0;HaplotypeScore=179.8364;InbreedingCoeff=0.8824;MQ=79.62;MQ0=1;MQRankSum=-10.946;QD=17.66;ReadPosRankSum=7.561;VQSLOD=4.5863;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:23:38.86:307,39,0	1/1:16,0:16:38.14:279,38,0	0/0:23,0:23:63.12:0,63,913	0/0:30,0:30:80.92:0,81,1120	1/1:27,0:27:50.58:359,51,0	1/1:15,0:15:38.69:276,39,0	1/1:32,0:32:71.42:508,71,0	1/1:3,10:13:11.41:390,11,0	1/1:23,0:23:53.56:380,54,0	1/1:14,0:14:41.70:303,42,0	1/1:6,0:6:2.98:21,3,0	1/1:34,0:34:99:721,101,0	1/1:28,0:28:62.49:445,62,0	1/1:38,0:38:95.22:678,95,0	1/1:33,0:33:80.35:571,80,0	1/1:29,0:29:77.37:551,77,0	1/1:33,0:33:92.25:658,92,0	1/1:16,0:16:38.69:276,39,0	1/1:1,6:7:20.99:229,21,0	1/1:4,2:6:11.39:136,11,0	1/1:11,31:41:60.04:763,60,0	1/1:15,0:15:23.83:173,24,0	1/1:15,0:15:32.73:233,33,0	1/1:27,0:27:56.21:403,56,0	1/1:18,0:18:35.64:250,36,0	1/1:28,0:28:80.37:579,80,0	1/1:20,0:20:47.63:340,48,0	1/1:8,0:8:23.81:170,24,0
chr10	18702126	.	GA	G	7038.05	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=6.487;DP=613;FS=0.000;HRun=1;HaplotypeScore=179.5693;InbreedingCoeff=0.8850;MQ=80.58;MQ0=1;MQRankSum=-11.231;QD=12.59;ReadPosRankSum=7.754;VQSLOD=3.3672;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:21,2:23:38.34:239,38,0	1/1:15,1:16:37.06:198,37,0	0/0:25,0:25:69.09:0,69,817	0/0:29,0:29:80.60:0,81,884	1/1:26,1:27:48.97:263,49,0	1/1:15,0:15:37.40:198,37,0	1/1:30,0:30:68.97:364,69,0	1/1:12,1:13:11.75:218,12,0	1/1:23,0:23:51.84:278,52,0	1/1:14,0:14:40.66:240,41,0	1/1:5,1:6:2.88:15,3,0	1/1:33,1:34:97.86:521,98,0	1/1:24,2:26:60.38:319,60,0	1/1:36,1:37:91.95:485,92,0	1/1:32,1:33:77.72:415,78,0	1/1:27,1:28:74.75:395,75,0	1/1:33,0:33:89.13:472,89,0	1/1:16,0:16:37.38:198,37,0	1/1:7,0:7:20.85:149,21,0	1/1:5,1:6:11.88:87,12,0	1/1:37,4:40:59.41:413,59,0	1/1:13,2:15:23.08:124,23,0	1/1:14,1:15:31.61:167,32,0	1/1:27,0:27:54.44:289,54,0	1/1:18,0:18:34.25:178,34,0	1/1:28,0:28:78.02:439,78,0	1/1:18,2:20:46.17:251,46,0	1/1:8,0:8:23:122,23,0
chr10	18702539	.	CT	C	1856.88	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=-4.257;DP=497;FS=0.000;HRun=12;HaplotypeScore=88.9856;InbreedingCoeff=0.8653;MQ=71.56;MQ0=1;MQRankSum=3.531;QD=12.63;ReadPosRankSum=5.610;VQSLOD=3.6329;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:39:83.97:0,84,819	0/0:4,0:9:17.51:0,18,102	0/0:10,0:10:8.80:0,9,98	0/1:18,0:17:8.83:9,0,105	0/0:10,0:31:58.89:0,59,326	1/1:2,10:12:29.88:232,30,0	1/1:3,21:26:33.40:422,33,0	0/0:23,0:27:38.25:0,38,356	0/0:3,0:17:17.16:0,17,90	0/0:7,0:17:43.42:0,43,247	0/0:4,0:15:34.79:0,35,201	1/1:3,16:19:47.81:371,48,0	0/0:4,0:14:16.73:0,17,82	0/0:5,0:15:19.95:0,20,104	1/1:2,8:11:22.95:168,23,0	1/1:0,6:6:14.94:116,15,0	0/0:4,0:19:22.88:0,23,125	1/1:4,17:22:16.41:300,16,0	0/0:27,2:28:10.68:0,11,470	0/0:13,1:16:38.86:0,39,363	0/0:19,0:21:32.88:0,33,307	1/1:0,14:14:26.88:209,27,0	0/0:3,0:10:12.06:0,12,73	0/0:2,0:10:9.03:0,9,54	1/1:2,15:18:7.46:231,7,0	0/0:7,0:16:37.38:0,37,207	0/0:12,0:24:31.60:0,32,170	0/0:5,0:11:11.52:0,12,64
chr10	18702968	.	A	AT	13443.56	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-15.103;DP=705;FS=0.833;HRun=9;HaplotypeScore=76.2728;InbreedingCoeff=0.9985;MQ=74.18;MQ0=0;MQRankSum=-3.401;QD=24.49;ReadPosRankSum=3.955;VQSLOD=5.4891;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,45:52:99:1144,106,0	1/1:2,14:16:36.10:398,36,0	0/0:18,0:19:28.95:0,29,232	0/0:21,0:21:30.57:0,31,277	1/1:3,24:27:66.02:677,66,0	1/1:5,18:24:44.95:478,45,0	1/1:1,28:30:72.03:778,72,0	0/0:6,0:31:41.25:0,41,126	1/1:1,24:25:66.18:730,66,0	1/1:3,23:26:69.09:709,69,0	1/1:1,21:22:60.04:623,60,0	1/1:3,13:16:30.08:332,30,0	1/1:1,16:17:48.13:531,48,0	1/1:0,21:21:51.14:564,51,0	1/1:2,18:20:45.12:498,45,0	1/1:2,19:21:51.14:564,51,0	1/1:5,36:41:99:1172,108,0	1/1:3,32:35:84.23:929,84,0	0/0:6,0:24:31.07:0,31,91	0/0:2,0:26:28.56:0,29,105	0/0:6,0:34:48.88:0,49,144	1/1:3,26:29:60.01:622,60,0	1/1:2,18:21:41.95:445,42,0	1/1:2,12:16:41.78:427,42,0	1/1:4,18:22:36.10:398,36,0	1/1:5,18:23:51.12:554,51,0	1/1:6,25:31:37.12:638,37,0	1/1:4,9:13:21.06:232,21,0
chr10	18703302	.	TACACACAC	T	1164.41	PASS	AB=1.000;AC=17;AF=0.315;AN=54;BaseQRankSum=-2.510;DP=583;FS=9.533;HRun=0;HaplotypeScore=145.1716;InbreedingCoeff=0.6024;MQ=56.01;MQ0=29;MQRankSum=2.631;QD=7.10;ReadPosRankSum=3.032;VQSLOD=1.8085;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:25:6.92:0,7,48	1/1:6,0:6:7.56:73,8,0	0/0:39,0:16:11.98:0,12,100	0/0:38,0:18:2.17:0,2,49	1/1:12,8:19:3:27,3,0	0/0:13,0:13:11.60:0,12,149	0/0:29,0:27:9.38:0,9,57	0/0:30,0:29:30.81:0,31,301	0/0:17,0:16:5.91:0,6,39	1/1:13,0:13:12.01:150,12,0	./.	0/0:17,0:14:14.99:0,15,135	0/1:16,0:16:7.91:8,0,63	0/1:15,0:14:0.01:0,0,0	0/0:14,0:14:5.47:0,5,49	0/0:20,0:20:10.63:0,11,117	1/1:33,0:31:33.94:494,34,0	0/0:29,0:28:25.95:0,26,247	0/0:13,0:13:2.29:0,2,6	0/0:21,0:19:7.76:0,8,61	0/0:28,0:27:17.07:0,17,114	0/0:22,0:21:7.97:0,8,166	0/1:18,0:17:2.03:2,0,19	0/0:32,0:31:3.46:0,3,25	0/0:17,0:17:9:0,9,99	1/1:10,7:14:20.38:195,20,0	1/1:15,0:14:13.19:316,13,0	1/1:11,0:9:11.69:69,12,0
chr10	18703337	.	ACG	A	3826.85	PASS	AB=0.949;AC=45;AF=0.865;AN=52;BaseQRankSum=-2.391;DP=538;FS=7.990;HRun=0;HaplotypeScore=98.5962;InbreedingCoeff=-0.1244;MQ=41.89;MQ0=65;MQRankSum=5.506;QD=7.22;ReadPosRankSum=-0.938;VQSLOD=2.4303;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:14:23.95:194,24,0	1/1:5,0:4:11.94:93,12,0	./.	./.	1/1:16,0:12:8.89:65,9,0	1/1:18,0:17:5.86:48,6,0	1/1:45,2:37:20.86:189,21,0	0/1:8,0:23:45.06:45,0,198	1/1:14,0:10:14.92:117,15,0	0/1:8,10:15:1.67:94,0,2	1/1:14,0:13:11.81:98,12,0	0/1:21,0:17:7.20:7,0,30	1/1:19,0:19:34.22:264,34,0	1/1:10,0:8:11.81:100,12,0	1/1:15,1:14:11.93:90,12,0	0/1:18,0:18:33.05:111,0,33	1/1:34,0:29:63.06:493,63,0	0/1:24,0:20:75.34:178,0,75	1/1:8,0:8:1.34:119,1,0	1/1:8,8:14:2.97:20,3,0	1/1:39,0:36:29.68:226,30,0	0/1:23,0:21:2.57:60,0,3	1/1:14,0:13:17.97:148,18,0	1/1:34,0:31:53.70:442,54,0	0/1:23,0:22:11.38:39,0,11	1/1:22,0:16:19.80:191,20,0	1/1:15,0:13:30.39:242,30,0	1/1:16,0:11:20.86:154,21,0
chr10	18703338	.	C	CAT	336.60	PASS	AB=0.935;AC=7;AF=0.135;AN=52;BaseQRankSum=-3.607;DP=533;FS=2.577;HRun=0;HaplotypeScore=117.9599;InbreedingCoeff=0.0384;MQ=41.88;MQ0=65;MQRankSum=-1.056;QD=2.27;ReadPosRankSum=-1.545;VQSLOD=2.1844;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:14:0.89:0,1,125	0/0:5,0:4:11.87:0,12,80	./.	./.	0/0:16,0:12:8.58:0,9,59	0/0:18,0:17:11.92:0,12,106	0/1:50,0:40:19.83:20,0,128	0/1:23,1:23:9.76:289,0,10	0/0:14,0:10:11.87:0,12,81	0/0:18,0:15:27.21:0,27,165	0/0:14,0:13:11.75:0,12,85	0/0:19,0:15:11.87:0,12,100	0/0:19,0:19:14.31:0,14,189	0/0:10,0:8:11.62:0,12,78	0/0:17,0:15:11.87:0,12,81	0/0:19,0:19:20.05:0,20,152	0/0:34,0:29:54.97:0,55,373	0/0:25,0:20:20.94:0,21,176	0/1:8,0:8:17.65:18,0,67	1/1:14,0:12:2.97:20,3,0	0/1:23,12:34:99:102,0,142	0/0:24,0:22:11.33:0,11,107	0/1:14,0:13:7.02:7,0,86	0/0:34,0:31:53.51:0,54,373	0/0:22,0:21:9.38:0,9,62	0/0:23,0:17:38.16:0,38,234	0/0:14,0:12:4.37:0,4,156	0/0:14,0:9:20.73:0,21,138
chr10	18703341	.	A	ACG	273.74	PASS	AB=0.920;AC=9;AF=0.180;AN=50;BaseQRankSum=4.120;DP=543;FS=0.730;HRun=0;HaplotypeScore=127.1171;InbreedingCoeff=-0.2112;MQ=41.81;MQ0=65;MQRankSum=-1.890;QD=1.11;ReadPosRankSum=0.359;VQSLOD=2.3254;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:15:20.97:0,21,173	0/0:5,0:4:11.82:0,12,79	./.	./.	0/0:16,0:12:11.80:0,12,88	0/1:10,9:18:26.72:27,0,42	0/1:53,0:42:23.87:155,0,24	0/0:23,0:22:34.05:0,34,296	0/0:15,0:11:14.82:0,15,113	0/0:19,0:16:26.63:0,27,184	0/0:17,0:16:14.81:0,15,123	0/1:19,0:15:6.05:6,0,71	0/0:20,0:20:31.71:0,32,238	0/0:10,0:8:11.78:0,12,98	0/1:20,0:18:5.23:5,0,50	0/1:21,0:21:39.14:39,0,81	0/0:32,0:27:57.12:0,57,445	0/1:27,1:23:97.24:134,0,97	0/0:7,0:7:5.68:0,6,108	./.	0/1:38,0:34:18.14:18,0,125	0/1:27,0:25:10.66:11,0,47	0/0:13,0:12:14.64:0,15,106	0/0:33,0:30:50.91:0,51,417	0/1:9,1:20:4.89:5,0,38	0/0:24,0:18:33.78:0,34,236	0/0:12,0:10:26.82:0,27,204	0/0:14,0:9:17.88:0,18,132
chr10	18703357	.	A	ATG	250.21	PASS	AB=0.881;AC=5;AF=0.093;AN=54;BaseQRankSum=2.493;DP=555;FS=2.208;HRun=0;HaplotypeScore=107.9737;InbreedingCoeff=0.1804;MQ=42.55;MQ0=72;MQRankSum=-2.697;QD=3.79;ReadPosRankSum=1.270;VQSLOD=2.2833;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:18:36.09:0,36,504	0/0:8,0:7:18.02:0,18,230	./.	0/0:10,0:1:3.01:0,3,48	0/0:18,0:13:17.67:0,18,232	0/0:20,0:19:14.30:0,14,171	0/0:50,0:39:33.62:0,34,397	0/1:10,0:9:92.54:93,0,174	0/0:16,0:12:18.03:0,18,245	0/0:20,0:15:36.10:0,36,478	0/0:20,0:19:35.95:0,36,539	0/0:23,0:20:30.08:0,30,424	0/0:22,0:21:36.25:0,36,503	0/0:13,0:11:20.99:0,21,309	0/0:26,0:23:38.48:0,38,515	0/0:19,0:19:26.01:0,26,374	0/0:26,0:21:39.67:0,40,565	0/0:27,0:20:49.28:0,49,615	0/1:4,5:9:99:160,0,129	1/1:11,0:9:3.01:39,3,0	0/1:36,0:32:69.59:70,0,181	0/0:24,0:22:23.69:0,24,308	0/0:12,0:11:15.05:0,15,221	0/0:32,0:29:51.14:0,51,743	0/0:22,0:21:18.02:0,18,227	0/0:23,0:18:41.90:0,42,490	0/0:11,0:9:21.07:0,21,290	0/0:19,0:14:36.11:0,36,496
chr10	18705039	.	C	CGTGT	3089.74	PASS	AB=0.929;AC=41;AF=0.891;AN=46;BaseQRankSum=-0.324;DP=593;FS=7.840;HRun=0;HaplotypeScore=130.9953;InbreedingCoeff=0.0612;MQ=65.08;MQ0=16;MQRankSum=-0.186;QD=6.97;ReadPosRankSum=-1.796;VQSLOD=2.0324;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:34:6.01:0,6,56	1/1:6,3:9:3.01:70,3,0	./.	./.	1/1:17,0:16:5.54:87,6,0	1/1:20,0:17:9.50:109,9,0	./.	./.	1/1:12,5:18:9.03:210,9,0	1/1:21,0:21:20.35:341,20,0	1/1:14,0:14:9.01:135,9,0	0/1:17,0:19:40.16:49,0,40	1/1:15,0:15:2.99:24,3,0	1/1:20,0:20:12.04:245,12,0	1/1:19,0:19:6.02:118,6,0	0/1:23,0:23:28.41:169,0,28	1/1:34,0:33:16.36:228,16,0	1/1:21,0:21:12.60:113,13,0	1/1:18,0:18:7.25:64,7,0	1/1:19,0:18:6.02:117,6,0	1/1:29,0:28:5.98:53,6,0	1/1:15,0:15:9.97:169,10,0	1/1:19,4:23:3.40:72,3,0	0/1:26,0:29:39.88:48,0,40	1/1:11,0:11:9.03:176,9,0	1/1:32,0:31:25.43:364,25,0	1/1:9,5:15:12.04:244,12,0	./.
chr10	18705084	.	G	GTGTA	4940.50	PASS	AB=0.903;AC=34;AF=0.607;AN=56;BaseQRankSum=-1.620;DP=588;FS=6.035;HRun=0;HaplotypeScore=130.1574;InbreedingCoeff=-0.0381;MQ=65.84;MQ0=15;MQRankSum=0.315;QD=9.63;ReadPosRankSum=2.053;VQSLOD=3.9151;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:29:52.23:491,52,0	0/1:9,0:9:34.16:34,0,48	0/0:31,0:19:54.05:0,54,548	0/0:30,0:16:40.37:0,40,403	0/1:11,0:11:13.03:13,0,138	1/1:16,0:13:29.92:308,30,0	0/1:8,21:30:0.04:0,0,0	1/1:32,0:32:89.85:774,90,0	0/1:19,0:18:97.94:98,0,203	0/1:18,0:18:76.14:76,0,260	0/1:16,0:16:29.27:29,0,181	1/1:19,0:20:29.45:417,29,0	0/0:12,0:12:11.37:0,11,93	0/1:13,0:13:48.90:160,0,49	0/1:5,13:20:57.64:146,0,58	1/1:24,0:25:32.05:477,32,0	0/1:34,0:33:44.11:44,0,286	1/1:9,0:26:16.65:120,17,0	1/1:13,0:13:38.29:357,38,0	1/1:2,14:17:6.02:160,6,0	1/1:27,0:26:50.46:421,50,0	1/1:3,16:24:15.03:294,15,0	0/1:23,0:22:19.59:20,0,165	0/1:28,0:28:27.20:27,0,354	0/1:2,12:17:8.95:230,0,9	0/1:23,0:22:99:164,0,230	0/1:21,0:21:80.38:80,0,230	0/0:2,0:1:2.99:0,3,24
chr10	18705919	.	TCCAGATGTGTCTC	T	5312.83	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=11.643;DP=643;FS=1.770;HRun=0;HaplotypeScore=249.3697;InbreedingCoeff=0.9986;MQ=85.34;MQ0=2;MQRankSum=-8.142;QD=77.00;ReadPosRankSum=-2.597;VQSLOD=3.6784;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,123,7504	0/0:8,0:8:24.08:0,24,1425	0/0:18,0:19:48.16:0,48,2368	0/0:23,0:23:63.22:0,63,3229	0/0:27,0:27:81.28:0,81,4963	0/0:18,0:18:51.17:0,51,3157	0/0:22,0:22:60.21:0,60,3793	1/1:4,20:24:60.19:1605,60,0	0/0:19,0:19:51.17:0,51,3259	0/0:18,0:18:45.15:0,45,2707	0/0:23,0:23:60.21:0,60,3593	0/0:24,0:24:72.23:0,72,4244	0/0:27,0:27:81.28:0,81,4859	0/0:34,0:34:99:0,99,6372	0/0:21,0:21:63.22:0,63,3975	0/0:24,0:24:66.23:0,66,3981	0/0:36,0:36:99:0,102,5997	0/0:30,0:30:87.30:0,87,5169	1/1:2,16:17:48.14:1552,48,0	1/1:2,11:13:24.08:958,24,0	1/1:1,13:13:30.10:1198,30,0	0/0:12,0:12:36.12:0,36,2097	0/0:13,0:13:39.13:0,39,2430	0/0:44,0:44:99:0,123,7559	0/0:19,0:19:54.19:0,54,3462	0/0:30,0:30:87.29:0,87,5250	0/0:27,0:27:81.28:0,81,5083	0/0:12,0:12:33.11:0,33,2138
chr10	18706186	.	C	CTACTTAGGAG	6694.37	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=11.115;DP=402;FS=34.283;HRun=0;HaplotypeScore=122.9353;InbreedingCoeff=0.9600;MQ=81.51;MQ0=1;MQRankSum=-11.118;QD=51.10;ReadPosRankSum=2.249;VQSLOD=2.7664;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:15:21.07:754,21,0	0/0:5,0:5:15.04:0,15,417	0/0:23,0:22:63.09:0,63,1638	0/0:25,0:25:71.91:0,72,1497	0/0:12,0:12:33.10:0,33,1000	1/1:8,0:8:18.06:651,18,0	1/1:13,0:13:9.03:325,9,0	1/1:14,0:13:25.85:402,26,0	0/0:21,0:21:57.16:0,57,1664	0/0:17,0:17:45.15:0,45,1337	0/0:18,0:18:48.15:0,48,1398	1/1:9,0:9:15.05:542,15,0	0/0:17,0:17:45.13:0,45,1160	0/0:20,0:20:54.17:0,54,1660	1/1:10,0:10:24.05:785,24,0	1/1:7,0:7:15.05:546,15,0	0/0:28,0:28:72.18:0,72,2007	1/1:8,0:8:12.04:429,12,0	1/1:8,0:8:18.02:370,18,0	1/1:12,0:12:23.99:695,24,0	1/1:4,9:14:9.03:323,9,0	1/1:8,0:8:12.04:436,12,0	0/0:18,0:18:45.13:0,45,1311	0/0:25,0:25:66.23:0,66,1994	1/1:4,0:4:12.04:434,12,0	0/0:19,0:19:54.18:0,54,1519	0/0:16,0:16:39.13:0,39,1191	0/0:7,0:7:18.06:0,18,586
chr10	18706187	.	T	TACTTAGGAGGCTG	17406.97	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-5.447;DP=442;FS=39.508;HRun=0;HaplotypeScore=138.8624;InbreedingCoeff=0.9757;MQ=78.91;MQ0=0;MQRankSum=-12.938;QD=102.39;ReadPosRankSum=0.935;VQSLOD=3.0322;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,5:28:39.13:2166,39,0	0/0:5,0:5:15.04:0,15,504	0/0:25,0:24:63.09:0,63,2004	0/0:25,0:25:71.95:0,72,1802	0/0:13,0:13:33.10:0,33,1220	1/1:1,6:10:18.06:1183,18,0	1/1:7,2:21:18.06:1183,18,0	1/1:19,0:21:57.04:1958,57,0	0/0:21,0:21:60.17:0,60,2073	0/0:17,0:17:45.15:0,45,1613	0/0:18,0:18:51.15:0,51,1743	1/1:5,6:16:29.67:1897,30,0	0/0:16,0:16:48.12:0,48,1442	0/0:20,0:20:54.17:0,54,2032	1/1:2,7:10:24.08:1420,24,0	1/1:2,5:8:21.07:1333,21,0	0/0:27,0:27:78.15:0,78,2493	1/1:2,4:9:12.04:790,12,0	1/1:4,2:10:24.04:972,24,0	1/1:6,6:16:39.05:2022,39,0	1/1:4,1:6:9.03:590,9,0	1/1:1,4:8:12.04:788,12,0	0/0:17,0:17:45.13:0,45,1591	0/0:25,0:25:66.23:0,66,2437	1/1:2,4:6:18.06:1107,18,0	0/0:20,0:20:54.18:0,54,1836	0/0:16,0:16:39.13:0,39,1398	0/0:7,0:7:18.06:0,18,718
chr10	18706358	.	A	AGAGG	1109.65	PASS	AB=1.000;AC=31;AF=0.705;AN=44;BaseQRankSum=0.605;DP=174;FS=4.962;HRun=0;HaplotypeScore=54.0397;InbreedingCoeff=0.1406;MQ=37.04;MQ0=4;MQRankSum=-1.252;QD=7.93;ReadPosRankSum=3.253;VQSLOD=1.2520;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:11:5.92:22,6,0	1/1:2,0:2:3.01:36,3,0	./.	./.	0/0:10,0:10:3.11:0,3,17	./.	0/0:3,0:3:0:0,0,0	1/1:19,0:17:3.92:41,4,0	0/1:14,0:13:12.12:111,0,12	1/1:8,0:8:16.14:131,16,0	0/1:7,0:7:6.45:6,0,14	1/1:4,0:4:3.79:18,4,0	1/1:4,0:4:10.84:105,11,0	1/1:0,6:7:3.01:81,3,0	./.	0/0:2,0:2:2.28:0,2,24	1/1:11,0:11:13.06:238,13,0	./.	0/1:8,0:8:6.87:8,0,7	1/1:2,0:2:1.25:3,1,0	1/1:4,0:5:0.13:0,0,0	./.	1/1:10,0:10:4.61:34,5,0	1/1:2,0:2:3.01:49,3,0	0/0:4,0:3:0:0,0,0	1/1:7,0:7:17.32:153,17,0	0/1:7,0:7:3.84:4,0,15	0/1:10,0:10:32.07:186,0,32
chr10	18706989	.	ATCT	A	1131.63	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.552;DP=674;FS=0.000;HRun=0;HaplotypeScore=91.9819;InbreedingCoeff=0.9959;MQ=88.75;MQ0=0;MQRankSum=-5.148;QD=34.29;ReadPosRankSum=1.669;VQSLOD=4.2442;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,33:33:72.25:1227,72,0	0/0:14,0:14:42.14:0,42,969	0/0:22,0:22:60.19:0,60,1257	0/0:28,0:28:75.26:0,75,1567	0/0:30,0:30:90.29:0,90,1994	0/0:26,0:26:75.26:0,75,1730	0/0:22,0:22:66.23:0,66,1485	0/0:30,0:30:84.27:0,84,1855	0/0:28,0:28:84.29:0,84,1936	0/0:23,0:23:69.24:0,69,1560	0/0:17,0:17:45.15:0,45,989	0/0:21,0:21:63.22:0,63,1414	0/0:18,0:18:51.18:0,51,1167	0/0:17,0:17:51.16:0,51,1120	0/0:31,0:31:93.32:0,93,2127	0/0:25,0:25:72.24:0,72,1604	0/0:28,0:28:84.27:0,84,1873	0/0:7,0:7:21.07:0,21,464	0/0:31,0:30:81.26:0,81,1823	0/0:22,0:22:60.21:0,60,1384	0/0:32,0:32:96.33:0,96,2202	0/0:20,0:20:57.20:0,57,1276	0/0:21,0:21:63.22:0,63,1434	0/0:23,0:23:69.24:0,69,1564	0/0:23,0:23:66.23:0,66,1521	0/0:28,0:28:78.27:0,78,1764	0/0:36,0:36:99:0,99,2172	0/0:18,0:18:54.19:0,54,1191
chr10	18708423	.	CT	C	3889.61	PASS	AB=0.745;AC=27;AF=0.482;AN=56;BaseQRankSum=-9.267;DP=578;FS=5.296;HRun=13;HaplotypeScore=87.3484;InbreedingCoeff=0.7837;MQ=75.13;MQ0=2;MQRankSum=-3.751;QD=11.93;ReadPosRankSum=4.235;VQSLOD=3.7067;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:21,24:46:62.11:590,62,0	0/0:0,0:7:11.48:0,11,62	0/1:21,0:18:9.83:10,0,82	0/0:13,0:9:4.76:0,5,35	0/0:5,0:22:37.70:0,38,219	0/1:10,9:19:2.37:148,0,2	1/1:3,17:20:34.72:278,35,0	1/1:11,15:27:37.73:267,38,0	1/1:1,22:23:59.66:437,60,0	0/0:5,0:18:16.60:0,17,160	0/0:6,0:17:9.84:0,10,88	1/1:4,14:18:32.77:241,33,0	0/0:3,0:18:21.77:0,22,109	0/0:13,0:16:15.35:0,15,90	1/1:6,18:24:44.71:327,45,0	1/1:1,10:12:25.81:181,26,0	0/0:8,0:24:28.35:0,28,143	1/1:6,19:26:43.71:312,44,0	1/1:3,12:15:35.75:261,36,0	1/1:5,14:20:14.37:223,14,0	0/1:4,8:12:11.30:91,0,11	1/1:3,17:20:44.71:328,45,0	0/0:5,0:17:14.36:0,14,87	0/0:5,0:27:39.92:0,40,210	1/1:9,13:22:26.76:197,27,0	0/0:12,0:34:43.81:0,44,265	0/0:7,0:23:25.49:0,25,135	0/0:2,0:15:20.03:0,20,108
chr10	18710439	.	CT	C	3756.83	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-0.425;DP=420;FS=6.796;HRun=8;HaplotypeScore=106.3379;InbreedingCoeff=0.9506;MQ=72.85;MQ0=0;MQRankSum=-4.036;QD=21.35;ReadPosRankSum=0.577;VQSLOD=3.1343;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:27.08:0,27,324	0/0:14,0:14:36.11:0,36,434	0/0:17,0:15:3.79:0,4,237	0/0:17,0:15:23.75:0,24,229	0/0:17,0:17:30.04:0,30,334	1/1:2,18:20:51.08:492,51,0	1/1:3,14:17:36.05:348,36,0	1/1:5,17:22:51.06:487,51,0	0/0:16,0:16:33.06:0,33,382	0/0:25,0:26:66.06:0,66,766	0/0:16,0:16:42.13:0,42,507	1/1:2,11:13:30.05:289,30,0	0/0:17,0:17:42.05:0,42,475	0/0:9,0:9:17.97:0,18,184	1/1:5,12:17:36.05:347,36,0	1/1:2,15:17:42.07:405,42,0	0/0:11,0:11:24.07:0,24,290	1/1:2,11:13:30.04:289,30,0	1/1:8,10:18:30.04:290,30,0	1/1:1,11:12:27.04:261,27,0	1/1:3,1:4:3:29,3,0	1/1:0,11:11:24.04:232,24,0	0/0:12,0:12:24.03:0,24,273	0/0:12,0:12:24.07:0,24,289	1/1:1,11:12:30.04:290,30,0	0/0:18,0:18:39.08:0,39,455	0/0:19,0:19:45.14:0,45,543	0/0:14,0:14:24.07:0,24,290
chr10	18712705	.	T	TG	12477.13	PASS	AB=0.545;AC=35;AF=0.625;AN=56;BaseQRankSum=-2.626;DP=489;FS=7.980;HRun=0;HaplotypeScore=119.5641;InbreedingCoeff=0.9232;MQ=84.57;MQ0=1;MQRankSum=-9.153;QD=43.02;ReadPosRankSum=0.933;VQSLOD=3.7743;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,18:21:48.16:764,48,0	1/1:0,7:7:18.06:287,18,0	0/0:18,0:18:51.16:0,51,697	0/0:25,0:25:72.17:0,72,924	1/1:2,14:16:39.12:599,39,0	0/0:25,0:25:75.23:0,75,1030	0/0:17,0:17:48.15:0,48,654	1/1:2,20:22:66.21:1023,66,0	1/1:0,13:13:36.12:574,36,0	1/1:1,19:20:60.16:931,60,0	1/1:0,26:26:78.27:1244,78,0	0/0:22,0:22:60.20:0,60,837	1/1:1,14:15:36.12:574,36,0	1/1:0,12:12:36.12:575,36,0	0/0:17,0:17:48.16:0,48,671	0/0:28,0:28:81.27:0,81,1132	1/1:0,19:19:54.18:862,54,0	0/0:8,0:8:21.07:0,21,294	1/1:0,18:18:54.18:863,54,0	1/1:2,16:18:45.15:719,45,0	1/1:0,8:8:18.06:288,18,0	0/0:20,0:19:57.18:0,57,780	1/1:0,16:16:48.16:765,48,0	0/1:2,10:12:14.87:355,0,15	0/0:19,0:19:57.18:0,57,781	1/1:2,16:18:54.15:834,54,0	1/1:3,14:17:45.14:695,45,0	1/1:0,12:12:33.11:527,33,0
chr10	18712739	.	G	GTA	8200.92	PASS	AB=0.922;AC=50;AF=0.893;AN=56;BaseQRankSum=3.252;DP=415;FS=4.393;HRun=0;HaplotypeScore=166.4492;InbreedingCoeff=-0.1123;MQ=68.68;MQ0=1;MQRankSum=-4.675;QD=19.76;ReadPosRankSum=8.582;VQSLOD=4.6259;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:20:45.63:339,46,0	0/1:3,0:3:15.26:15,0,24	0/1:20,1:24:99:194,0,270	0/1:7,0:10:14.57:184,0,15	1/1:8,0:8:2.81:98,3,0	1/1:22,0:22:60.02:581,60,0	1/1:13,0:13:23:260,23,0	1/1:23,0:23:68.99:675,69,0	1/1:14,0:14:26.66:247,27,0	1/1:16,0:16:22.48:268,22,0	1/1:15,0:15:22.72:244,23,0	1/1:20,0:20:43.54:441,44,0	1/1:13,0:13:37.81:277,38,0	0/1:10,0:10:8.65:153,0,9	1/1:15,0:15:29.65:348,30,0	1/1:18,0:18:28.47:399,28,0	1/1:12,0:12:31.74:257,32,0	1/1:11,0:11:33.02:307,33,0	1/1:24,0:24:42.19:515,42,0	1/1:14,0:14:38.07:298,38,0	0/1:9,0:9:8.35:117,0,8	1/1:20,0:19:33.18:421,33,0	0/1:15,0:15:5.93:293,0,6	1/1:12,0:12:8.80:181,9,0	1/1:20,0:20:29.48:506,29,0	1/1:15,0:15:39.26:296,39,0	1/1:10,0:10:13.52:176,14,0	1/1:4,0:4:11.98:114,12,0
chr10	18712752	.	CCCT	C	4541.03	PASS	AB=1.000;AC=30;AF=0.536;AN=56;BaseQRankSum=0.225;DP=349;FS=91.168;HRun=0;HaplotypeScore=148.4915;InbreedingCoeff=0.5377;MQ=72.34;MQ0=1;MQRankSum=-8.945;QD=23.05;ReadPosRankSum=-0.436;VQSLOD=1.2340;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:1.96:0,2,89	1/1:0,1:1:3.01:49,3,0	0/0:23,0:20:46.86:0,47,740	0/0:10,0:9:24:0,24,297	1/1:1,6:7:15.04:192,15,0	0/1:19,0:19:38.78:39,0,53	0/0:10,0:10:8.26:0,8,33	0/0:20,0:20:48.12:0,48,897	0/1:11,0:11:37.26:37,0,59	1/1:3,9:12:33.06:490,33,0	1/1:1,11:12:33.10:500,33,0	0/1:20,0:20:74.18:94,0,74	1/1:2,10:12:36.05:528,36,0	1/1:2,6:8:23.97:333,24,0	0/1:12,0:12:7.01:7,0,33	0/0:15,0:15:30.78:0,31,145	1/1:1,8:9:26.94:380,27,0	0/0:13,0:13:28.23:0,28,141	0/0:18,0:18:54.08:0,54,870	0/0:15,0:15:45:0,45,785	0/0:10,0:10:27.08:0,27,516	0/1:14,0:13:6.56:7,0,52	1/1:0,12:12:36.12:590,36,0	1/1:3,8:11:17.63:242,18,0	0/1:14,0:14:5.31:5,0,40	1/1:1,10:11:33.10:519,33,0	1/1:1,8:9:27.02:411,27,0	1/1:1,2:3:8.99:118,9,0
chr10	18712836	.	TAGACAG	T	4352.16	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=9.133;DP=412;FS=122.025;HRun=0;HaplotypeScore=121.9520;InbreedingCoeff=0.9369;MQ=83.46;MQ0=1;MQRankSum=-9.849;QD=47.83;ReadPosRankSum=-0.897;VQSLOD=1.7608;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,123,4349	1/1:0,5:5:15.05:354,15,0	0/0:19,0:19:51.18:0,51,1778	0/0:20,0:20:54.17:0,54,1654	1/1:3,15:18:24.08:459,24,0	0/0:22,0:21:54.19:0,54,1917	0/0:18,0:18:48.16:0,48,1695	0/0:24,0:23:66.23:0,66,2238	0/0:11,0:11:27.09:0,27,959	1/1:2,8:10:24.08:567,24,0	1/1:0,12:12:30.02:649,30,0	0/0:16,0:16:45.15:0,45,1601	1/1:1,3:4:9.03:212,9,0	1/1:1,3:4:9.03:212,9,0	0/0:15,0:15:45.15:0,45,1511	0/0:20,0:20:54.19:0,54,1890	1/1:1,4:5:9.03:212,9,0	0/0:12,0:12:33.11:0,33,1172	0/0:21,0:21:63.21:0,63,2068	0/0:13,0:13:39.13:0,39,1334	0/0:34,0:34:99:0,99,3524	0/0:16,0:16:39.13:0,39,1391	1/1:1,13:14:33.11:723,33,0	1/1:1,1:2:3.01:68,3,0	0/0:18,0:18:54.17:0,54,1842	1/1:1,5:6:15.05:329,15,0	1/1:1,6:7:12.04:282,12,0	1/1:0,4:4:12.04:283,12,0
chr10	18712924	.	C	CCTAAAACAAAAACA	16579.04	PASS	AB=0.817;AC=46;AF=0.920;AN=50;BaseQRankSum=-4.538;DP=185;FS=13.986;HRun=0;HaplotypeScore=222.7712;InbreedingCoeff=-0.0537;MQ=58.57;MQ0=1;MQRankSum=-1.066;QD=90.10;ReadPosRankSum=-0.341;VQSLOD=3.0622;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:16:14.80:1344,15,0	1/1:6,0:6:11.11:671,11,0	0/1:2,1:5:13.47:395,0,13	0/1:2,0:4:14.62:303,0,15	1/1:19,0:19:12.70:1221,13,0	1/1:4,0:3:1.04:168,1,0	1/1:9,0:9:21.07:909,21,0	1/1:8,0:8:21.07:878,21,0	1/1:4,0:4:10.52:346,11,0	1/1:12,0:12:32.70:1315,33,0	1/1:9,0:9:2.43:687,2,0	0/1:8,0:8:12.84:581,0,13	1/1:1,0:1:3.01:171,3,0	./.	1/1:6,0:6:15.05:812,15,0	1/1:8,0:8:17.82:624,18,0	./.	1/1:6,0:6:15.03:711,15,0	1/1:3,0:3:8.92:314,9,0	1/1:7,0:7:16.30:697,16,0	1/1:6,0:6:9.01:276,9,0	1/1:8,0:8:16.28:463,16,0	1/1:12,0:12:22.33:1233,22,0	./.	1/1:12,0:12:18.39:1570,18,0	1/1:6,0:6:18.06:714,18,0	1/1:2,0:2:6.02:173,6,0	0/1:2,0:2:2.70:4,0,3
chr10	18713438	.	CT	C	1554.78	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.863;DP=542;FS=0.000;HRun=3;HaplotypeScore=53.6048;InbreedingCoeff=0.9778;MQ=86.47;MQ0=0;MQRankSum=-1.294;QD=28.27;ReadPosRankSum=2.641;VQSLOD=2.7346;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,40:42:99:1342,110,0	0/0:9,0:9:27.06:0,27,363	0/0:22,0:22:66.20:0,66,880	0/0:21,0:21:51.31:0,51,741	0/0:13,0:13:39.09:0,39,530	0/0:30,0:30:84.24:0,84,1186	0/0:38,0:38:99:0,99,1390	0/0:35,0:35:93.30:0,93,1298	1/1:1,12:13:27.08:335,27,0	0/0:15,0:15:45.15:0,45,648	0/0:11,0:11:27.09:0,27,389	0/0:19,0:19:57.19:0,57,821	0/0:18,0:18:51.15:0,51,714	0/0:15,0:15:45.15:0,45,641	0/0:17,0:17:48.16:0,48,691	0/0:16,1:17:10.93:0,11,588	0/0:17,0:17:45.15:0,45,646	0/0:16,0:16:45.15:0,45,648	0/0:22,0:22:66.22:0,66,945	0/0:13,0:13:39.10:0,39,517	0/0:29,0:29:84.23:0,84,1142	0/0:18,0:18:51.17:0,51,716	0/0:9,0:9:27.09:0,27,389	0/0:17,0:17:51.17:0,51,722	0/0:23,0:23:66.22:0,66,950	0/0:15,0:15:45.15:0,45,648	0/0:17,0:17:51.17:0,51,730	0/0:11,0:11:30.09:0,30,409
chr10	18713973	.	GTGCATGCTAGC	G	4553.19	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.255;DP=749;FS=0.000;HRun=0;HaplotypeScore=280.7943;InbreedingCoeff=0.9999;MQ=82.93;MQ0=0;MQRankSum=-11.101;QD=64.13;ReadPosRankSum=1.493;VQSLOD=4.0529;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:18,33:51:87.30:2917,87,0	0/0:17,0:17:45.13:0,45,2372	0/0:25,0:25:51.17:0,51,2026	0/0:25,0:25:63.94:0,64,2323	0/0:21,0:21:57.18:0,57,2629	0/0:28,0:28:75.26:0,75,3882	0/0:31,0:31:84.27:0,84,4223	0/0:24,0:24:69.24:0,69,3384	1/1:3,17:20:48.16:1636,48,0	0/0:23,0:23:60.21:0,60,3093	0/0:15,0:15:42.14:0,42,2174	0/0:31,0:31:78.25:0,78,3999	0/0:22,0:22:63.22:0,63,3395	0/0:31,0:31:84.25:0,84,4438	0/0:30,0:30:84.29:0,84,4639	0/0:21,0:21:57.20:0,57,3142	0/0:48,0:48:99:0,120,6360	0/0:14,0:14:39.13:0,39,2186	0/0:20,0:20:42.14:0,42,2173	0/0:21,0:21:57.20:0,57,2987	0/0:41,0:41:99:0,108,5625	0/0:29,0:29:84.29:0,84,4393	0/0:23,0:23:57.20:0,57,2979	0/0:39,0:39:99:0,114,6173	0/0:20,0:20:57.18:0,57,2891	0/0:32,0:32:93.32:0,93,4752	0/0:31,0:31:84.27:0,84,4457	0/0:16,0:16:48.16:0,48,2523
chr10	18714432	.	A	AGG	15318.53	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-2.875;DP=569;FS=0.694;HRun=8;HaplotypeScore=150.1852;InbreedingCoeff=0.9593;MQ=71.22;MQ0=1;MQRankSum=-9.232;QD=29.18;ReadPosRankSum=1.611;VQSLOD=3.3628;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,23:31:72.20:1111,72,0	1/1:2,5:7:11.99:190,12,0	0/0:24,0:23:53.85:0,54,556	0/0:20,0:19:39.06:0,39,417	1/1:8,10:18:21.03:304,21,0	1/1:5,11:16:39.04:561,39,0	1/1:12,17:29:60.07:844,60,0	1/1:9,16:27:47.98:627,48,0	1/1:14,10:24:60.12:855,60,0	1/1:10,11:21:33.11:523,33,0	1/1:5,8:13:21.07:333,21,0	1/1:12,15:27:57.15:857,57,0	1/1:12,8:20:39.11:566,39,0	1/1:12,6:18:30.50:403,31,0	1/1:15,18:34:81.09:1132,81,0	1/1:6,19:25:63.13:935,63,0	1/1:9,17:26:54.18:850,54,0	1/1:5,8:13:27.05:400,27,0	1/1:7,10:18:36.12:550,36,0	1/1:8,4:13:20.66:303,21,0	1/1:10,7:18:26.57:358,27,0	1/1:7,12:20:41.31:598,41,0	1/1:5,8:13:21.07:333,21,0	1/1:14,9:24:41.50:524,41,0	1/1:9,11:20:39.13:612,39,0	1/1:12,11:23:45.06:637,45,0	1/1:7,14:21:48.12:727,48,0	1/1:1,5:6:12.04:183,12,0
chr10	18714491	.	G	GCACACACGA	48771.43	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=2.755;DP=474;FS=3.765;HRun=0;HaplotypeScore=172.1187;InbreedingCoeff=0.9197;MQ=79.78;MQ0=0;MQRankSum=-10.900;QD=114.22;ReadPosRankSum=6.705;VQSLOD=5.5298;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,14:18:45.15:2166,45,0	1/1:2,4:8:15.05:745,15,0	0/0:19,0:19:57.20:0,57,1840	0/0:28,0:27:78.26:0,78,2292	1/1:5,7:13:21.07:1057,21,0	1/1:0,14:16:42.14:2116,42,0	1/1:11,22:33:87.28:4256,87,0	1/1:12,10:23:66.23:2974,66,0	1/1:6,19:25:63.22:3061,63,0	1/1:8,8:16:45.15:2073,45,0	1/1:3,4:7:15.04:629,15,0	1/1:6,17:23:57.20:2776,57,0	1/1:6,12:19:48.16:2252,48,0	1/1:1,7:8:21.07:1058,21,0	1/1:6,20:27:63.20:3046,63,0	1/1:6,15:21:51.15:2442,51,0	1/1:11,8:19:30.10:1512,30,0	1/1:2,6:8:24.08:1099,24,0	1/1:7,7:16:39.13:1886,39,0	1/1:4,12:17:39.13:1936,39,0	1/1:3,4:8:18.06:890,18,0	1/1:3,14:18:42.14:2115,42,0	1/1:3,6:9:18.06:905,18,0	1/1:5,11:16:24.08:1208,24,0	1/1:3,10:15:24.08:1209,24,0	1/1:7,10:18:51.16:2311,51,0	1/1:5,16:23:57.20:2747,57,0	1/1:0,3:3:6.02:303,6,0
chr10	18714750	.	A	AC	16170.83	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-3.809;DP=545;FS=2.003;HRun=3;HaplotypeScore=74.7139;InbreedingCoeff=0.9916;MQ=75.62;MQ0=5;MQRankSum=-4.622;QD=33.76;ReadPosRankSum=2.838;VQSLOD=5.5145;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,30:32:87.24:1196,87,0	1/1:1,9:10:20.90:294,21,0	0/0:32,0:26:72.09:0,72,773	0/0:33,0:24:51.25:0,51,651	1/1:3,9:12:21.07:294,21,0	1/1:0,18:18:54.18:754,54,0	1/1:4,26:30:66.22:924,66,0	1/1:4,27:31:78.25:1072,78,0	1/1:1,19:20:48.16:672,48,0	1/1:2,22:23:66.19:878,66,0	1/1:2,15:17:45.15:626,45,0	1/1:4,9:14:30.09:406,30,0	1/1:1,21:22:60.13:815,60,0	1/1:5,14:18:36.12:504,36,0	1/1:1,14:15:39.13:546,39,0	1/1:1,23:24:63.21:882,63,0	1/1:1,19:20:51.17:714,51,0	1/1:0,9:9:27.09:371,27,0	1/1:3,14:17:37.66:487,38,0	1/1:0,9:9:24.08:335,24,0	1/1:2,22:23:47.95:670,48,0	1/1:1,13:14:42.10:561,42,0	1/1:0,16:16:42.14:586,42,0	1/1:3,20:23:39.10:526,39,0	1/1:1,11:12:21.03:272,21,0	1/1:0,17:17:48.14:653,48,0	1/1:1,14:15:39.13:545,39,0	1/1:1,14:15:42.14:587,42,0
chr10	18714938	.	GT	G	1382.69	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.091;DP=589;FS=10.775;HRun=8;HaplotypeScore=81.4639;InbreedingCoeff=0.9906;MQ=77.82;MQ0=0;MQRankSum=-1.131;QD=21.60;ReadPosRankSum=0.839;VQSLOD=3.5286;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,31:36:90.13:868,90,0	0/0:7,0:7:18.06:0,18,217	0/0:19,0:19:21.53:0,22,333	0/0:14,0:14:24.03:0,24,239	0/0:25,0:25:72.17:0,72,842	0/0:22,0:22:66.20:0,66,791	0/0:20,0:20:57.13:0,57,672	0/0:37,0:37:96.27:0,96,1129	1/1:4,24:28:66.10:636,66,0	0/0:26,0:26:72.21:0,72,857	0/0:15,0:15:42.11:0,42,489	0/0:22,0:22:63.19:0,63,761	0/0:18,0:18:51.16:0,51,616	0/0:21,0:21:54.11:0,54,626	0/0:22,0:22:57.17:0,57,686	0/0:27,0:27:75.22:0,75,895	0/0:22,0:22:51.15:0,51,606	0/0:14,0:14:39.12:0,39,471	0/0:19,0:19:51.16:0,51,616	0/0:18,0:18:51.14:0,51,604	0/0:21,0:21:54.17:0,54,652	0/0:25,0:25:69.20:0,69,820	0/0:15,0:15:36.11:0,36,435	0/0:13,0:13:36.11:0,36,435	0/0:28,0:28:78.22:0,78,928	0/0:21,0:21:63.19:0,63,761	0/0:26,0:26:75.23:0,75,903	0/0:6,0:8:20.93:0,21,232
chr10	18715048	.	A	AAAGAC	40157.36	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-4.511;DP=551;FS=0.000;HRun=0;HaplotypeScore=91.0997;InbreedingCoeff=0.9903;MQ=66.29;MQ0=0;MQRankSum=-6.800;QD=75.63;ReadPosRankSum=3.211;VQSLOD=6.7573;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,31:40:90.31:2734,90,0	1/1:5,3:9:21.07:635,21,0	0/0:12,0:12:27.54:0,28,490	0/0:8,0:8:21.05:0,21,399	1/1:6,15:23:48.16:1422,48,0	1/1:5,17:22:60.21:1801,60,0	1/1:4,6:10:27.09:786,27,0	1/1:14,18:34:99:2950,102,0	1/1:3,16:21:54.19:1649,54,0	1/1:9,11:21:54.17:1570,54,0	1/1:4,14:20:45.15:1356,45,0	1/1:5,18:23:63.22:1950,63,0	1/1:2,21:28:66.23:2008,66,0	1/1:4,18:23:63.21:1950,63,0	1/1:2,17:21:51.17:1575,51,0	1/1:4,18:23:54.18:1660,54,0	1/1:5,12:18:45.15:1360,45,0	1/1:3,14:17:45.15:1333,45,0	1/1:4,15:21:63.19:1816,63,0	1/1:2,20:22:57.20:1750,57,0	1/1:3,5:10:21.07:547,21,0	1/1:3,10:13:36.12:1086,36,0	1/1:2,14:16:45.15:1382,45,0	1/1:3,16:20:42.14:1316,42,0	1/1:5,11:16:30.10:911,30,0	1/1:7,18:25:72.25:2185,72,0	1/1:3,18:23:57.20:1782,57,0	1/1:3,4:10:21.07:641,21,0
chr10	18715546	.	CTCTT	C	3941.79	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=4.388;DP=709;FS=14.131;HRun=0;HaplotypeScore=148.4453;InbreedingCoeff=0.9950;MQ=73.14;MQ0=1;MQRankSum=-6.291;QD=45.31;ReadPosRankSum=-0.662;VQSLOD=3.2834;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,108,2659	0/0:13,0:13:33.11:0,33,756	0/0:29,0:24:50.91:0,51,1074	0/0:30,0:27:14.59:0,15,963	0/0:34,0:34:96.33:0,96,2477	0/0:24,0:24:60.18:0,60,1436	0/0:32,0:32:81.28:0,81,2017	1/1:2,21:23:63.22:1081,63,0	0/0:23,0:23:63.22:0,63,1590	0/0:28,0:28:78.27:0,78,1970	0/0:25,0:25:63.22:0,63,1528	0/0:18,0:18:45.15:0,45,1159	0/0:17,0:17:45.15:0,45,1162	0/0:33,0:33:84.27:0,84,2104	0/0:18,0:18:48.16:0,48,1192	0/0:21,0:21:45.15:0,45,1106	0/0:38,0:38:99:0,99,2418	0/0:29,0:29:78.27:0,78,1838	1/1:1,16:17:48.16:814,48,0	1/1:5,17:22:57.18:985,57,0	1/1:5,20:25:60.20:1061,60,0	0/0:27,0:27:78.27:0,78,1963	0/0:21,0:21:57.20:0,57,1424	0/0:30,0:30:78.27:0,78,1917	0/0:19,0:19:51.17:0,51,1281	0/0:22,0:22:57.20:0,57,1462	0/0:29,0:29:78.27:0,78,2008	0/0:19,0:19:45.15:0,45,1006
chr10	18715602	.	CA	C	21403.13	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-0.729;DP=634;FS=8.215;HRun=2;HaplotypeScore=77.9200;InbreedingCoeff=0.9952;MQ=81.09;MQ0=0;MQRankSum=-9.123;QD=35.73;ReadPosRankSum=6.190;VQSLOD=4.8090;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,35:35:87.28:1130,87,0	1/1:0,11:11:33.11:428,33,0	0/0:21,0:21:60.20:0,60,882	0/0:14,0:14:29.59:0,30,544	1/1:0,29:29:81.26:1052,81,0	1/1:0,26:26:72.23:935,72,0	1/1:1,27:28:72.23:935,72,0	1/1:4,18:22:63.19:793,63,0	1/1:1,15:16:39.13:506,39,0	1/1:0,28:28:84.27:1091,84,0	1/1:0,22:22:54.18:701,54,0	1/1:0,18:18:51.17:662,51,0	1/1:0,11:11:33.11:428,33,0	1/1:0,27:27:78.25:1013,78,0	1/1:0,18:18:45.15:584,45,0	1/1:0,16:16:42.14:545,42,0	1/1:0,32:32:93.30:1207,93,0	1/1:0,21:21:63.20:818,63,0	1/1:4,11:15:42.11:509,42,0	1/1:0,30:30:84.27:1089,84,0	1/1:1,20:21:51.15:648,51,0	1/1:0,37:37:99:1363,105,0	1/1:0,22:22:60.20:779,60,0	1/1:1,30:31:87.28:1130,87,0	1/1:0,20:20:60.20:779,60,0	1/1:0,35:35:99:1343,105,0	1/1:2,19:21:54.18:701,54,0	1/1:0,7:7:18.06:234,18,0
chr10	18716957	.	C	CT	4783.36	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-15.082;DP=595;FS=6.317;HRun=8;HaplotypeScore=60.3292;InbreedingCoeff=0.9991;MQ=86.04;MQ0=0;MQRankSum=-1.759;QD=27.97;ReadPosRankSum=2.588;VQSLOD=5.5525;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,99,906	0/0:8,0:8:21.01:0,21,192	0/0:26,0:25:50.47:0,50,440	0/0:26,0:27:34.46:0,34,394	0/0:21,0:21:63.03:0,63,576	1/1:4,23:27:63.19:727,63,0	1/1:2,16:18:42.12:485,42,0	0/0:33,0:33:81.02:0,81,737	0/0:14,0:14:42.02:0,42,384	0/0:24,0:24:59.95:0,60,539	0/0:21,0:21:63.03:0,63,576	1/1:2,23:26:72.21:829,72,0	0/0:19,0:19:45.01:0,45,412	0/0:16,0:16:33.01:0,33,302	1/1:4,20:24:32.71:630,33,0	1/1:2,22:24:57.17:658,57,0	0/0:27,0:27:69.02:0,69,631	1/1:1,10:11:30.09:346,30,0	0/0:17,0:17:39:0,39,357	0/0:15,0:15:42.02:0,42,384	0/0:17,0:17:51.01:0,51,462	1/1:2,20:22:51.15:588,51,0	0/0:17,0:17:45.02:0,45,412	0/0:16,0:16:44.97:0,45,399	1/1:2,17:19:45.13:519,45,0	0/0:23,0:23:60.02:0,60,549	0/0:30,0:30:78.01:0,78,708	0/0:16,0:16:48.03:0,48,439
chr10	18718118	.	GAAACA	G	731.52	PASS	AC=16;AF=0.333;AN=48;BaseQRankSum=3.708;DP=243;FS=26.188;HRun=0;HaplotypeScore=50.4614;InbreedingCoeff=0.7640;MQ=58.66;MQ0=7;MQRankSum=0.096;QD=24.38;ReadPosRankSum=-1.628;VQSLOD=1.3614;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:65.44:0,65,1694	./.	0/0:16,0:7:19.61:0,20,409	0/0:26,0:12:4.59:0,5,271	1/1:0,7:7:15.05:249,15,0	0/0:4,0:4:12.04:0,12,300	0/0:5,0:5:12.04:0,12,256	0/0:30,0:30:69.23:0,69,1655	0/0:14,0:14:30.10:0,30,775	1/1:0,3:3:9.03:161,9,0	1/1:0,4:4:6.02:115,6,0	0/0:8,0:8:21.07:0,21,561	1/1:2,0:2:3.01:37,3,0	1/1:0,6:6:6.02:115,6,0	0/0:4,0:4:12.04:0,12,299	0/0:4,0:4:12.04:0,12,299	./.	0/0:5,0:5:12.04:0,12,349	0/0:17,0:15:33.11:0,33,686	0/0:18,0:18:45.15:0,45,1212	0/0:16,0:16:42.10:0,42,1088	0/0:3,0:3:9.03:0,9,262	1/1:0,4:4:3.01:57,3,0	./.	0/0:8,0:8:24.08:0,24,576	1/1:2,1:3:6.02:106,6,0	1/1:1,0:1:3.01:54,3,0	./.
chr10	18718408	.	GA	G	4666.30	PASS	AB=0.598;AC=50;AF=0.893;AN=56;BaseQRankSum=-0.988;DP=519;FS=10.259;HRun=13;HaplotypeScore=74.6342;InbreedingCoeff=0.5756;MQ=71.28;MQ0=0;MQRankSum=-0.826;QD=9.60;ReadPosRankSum=4.582;VQSLOD=3.3953;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,19:27:21.44:286,21,0	1/1:1,0:3:4.07:12,4,0	0/0:17,0:15:20.34:0,20,174	0/0:15,0:14:11.78:0,12,86	1/1:3,0:14:16.27:48,16,0	1/1:5,25:31:18.24:451,18,0	1/1:6,17:25:48.81:340,49,0	1/1:12,15:28:43.62:306,44,0	0/1:6,20:28:3.61:285,0,4	1/1:2,0:18:31.02:90,31,0	1/1:2,0:8:12.22:36,12,0	1/1:10,15:26:21.09:248,21,0	1/1:1,0:21:25.33:74,25,0	1/1:0,0:15:24.44:71,24,0	1/1:2,22:25:41.43:454,41,0	1/1:3,14:20:38.90:258,39,0	1/1:2,0:20:32.59:96,33,0	1/1:7,15:22:39.89:310,40,0	1/1:3,8:13:27.90:184,28,0	1/1:5,22:29:37.50:420,37,0	1/1:3,14:17:9.60:233,10,0	1/1:6,7:13:14.86:109,15,0	1/1:0,0:13:23.17:67,23,0	1/1:1,0:15:17.47:52,17,0	0/1:3,4:7:17.28:50,0,17	1/1:3,0:18:24.58:70,25,0	1/1:3,0:23:30.05:87,30,0	1/1:1,0:6:10.18:30,10,0
chr10	18719352	.	GTGTGTT	G	890.10	PASS	AB=0.993;AC=15;AF=0.268;AN=56;BaseQRankSum=-2.588;DP=563;FS=1.239;HRun=0;HaplotypeScore=134.8109;InbreedingCoeff=-0.0384;MQ=59.40;MQ0=13;MQRankSum=-4.062;QD=3.77;ReadPosRankSum=2.163;VQSLOD=2.2903;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:47.84:0,48,582	0/1:15,0:15:50.64:51,0,365	0/0:26,0:15:35.58:0,36,322	0/0:28,0:17:42:0,42,444	0/1:27,0:27:40.71:41,0,632	1/1:0,16:16:21.07:476,21,0	1/1:2,18:20:6.02:137,6,0	0/0:28,0:28:76.98:0,77,920	0/0:17,0:17:48.05:0,48,945	0/1:16,0:16:0.10:0,0,523	0/1:18,0:18:6.90:7,0,168	0/0:19,0:19:9:0,9,77	0/1:10,0:10:19.45:19,0,208	0/0:18,0:16:12.04:0,12,231	0/1:12,0:11:24.61:25,0,84	0/0:16,0:16:3.16:0,3,137	0/1:23,0:23:25.48:25,0,69	0/1:21,2:23:99:125,0,120	0/0:26,0:24:65.55:0,66,918	0/0:26,0:25:47.17:0,47,651	0/0:21,0:20:41.12:0,41,347	0/1:14,0:14:2.90:3,0,42	0/0:23,0:23:9.02:0,9,313	0/0:23,0:22:40.97:0,41,797	0/0:20,0:20:8.08:0,8,58	0/1:23,0:23:81.71:82,0,619	0/1:19,0:19:52.67:53,0,424	0/0:12,0:12:0.63:0,1,235
chr10	18719354	.	GTGTT	G	1044.92	PASS	AB=0.993;AC=24;AF=0.429;AN=56;BaseQRankSum=-1.889;DP=563;FS=2.437;HRun=0;HaplotypeScore=119.8658;InbreedingCoeff=-0.0559;MQ=58.63;MQ0=12;MQRankSum=-2.816;QD=3.00;ReadPosRankSum=0.785;VQSLOD=2.3499;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:47.04:0,47,458	0/1:15,0:15:54.27:54,0,165	0/0:25,0:14:35.58:0,36,322	0/0:27,0:16:41.98:0,42,423	0/1:27,0:27:56.47:56,0,270	1/1:16,0:16:21.06:244,21,0	1/1:19,0:19:6.02:71,6,0	0/0:27,0:27:57.52:0,58,783	0/0:17,0:17:48.05:0,48,779	0/1:16,0:16:68.14:68,0,252	0/1:18,0:18:14.24:14,0,57	1/1:19,0:19:1.41:2,1,0	0/1:10,0:10:19.94:20,0,104	0/1:18,0:16:11.96:12,0,98	0/1:15,0:14:0.30:96,0,0	0/1:15,1:16:38.52:51,0,39	0/1:24,0:24:6.35:90,0,6	0/1:21,1:22:22.17:117,0,22	0/0:25,0:23:62.16:0,62,734	0/0:26,0:25:44.04:0,44,444	0/0:21,0:20:15.17:0,15,257	1/1:14,1:15:3.95:58,4,0	0/1:24,0:24:36.49:36,0,120	0/0:23,0:22:15.91:0,16,406	1/1:19,1:20:4.42:40,4,0	0/1:23,0:23:87.68:88,0,297	0/1:19,0:19:80.41:80,0,181	0/1:12,0:12:15.52:16,0,88
chr10	18719501	.	AC	A	816.33	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=10.260;DP=509;FS=0.000;HRun=2;HaplotypeScore=63.3807;InbreedingCoeff=0.9497;MQ=66.17;MQ0=0;MQRankSum=-1.849;QD=18.98;ReadPosRankSum=3.248;VQSLOD=3.7650;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,26:30:73.27:639,73,0	0/0:4,0:4:12.04:0,12,177	0/0:5,0:5:14.53:0,15,174	0/0:6,0:5:12.04:0,12,180	0/0:15,0:15:45.14:0,45,655	0/0:15,0:15:42.14:0,42,627	0/0:37,0:37:99:0,108,1573	0/0:17,0:17:45.12:0,45,616	1/1:1,12:13:38.28:299,38,0	0/0:14,0:14:39.13:0,39,584	0/0:10,0:10:27.07:0,27,367	0/0:30,0:30:87.29:0,87,1302	0/0:14,0:14:30.10:0,30,450	0/0:26,0:26:75.25:0,75,1121	0/0:11,0:11:30.10:0,30,449	0/0:16,1:17:17.51:0,18,640	0/0:46,0:45:99:0,135,1997	0/0:20,0:20:60.20:0,60,892	0/0:14,0:14:39.13:0,39,575	0/0:8,0:8:24.08:0,24,359	0/0:38,0:38:99:0,105,1573	0/0:13,0:13:36.12:0,36,539	0/0:10,0:10:27.09:0,27,402	0/0:34,0:34:93.27:0,93,1367	0/0:15,0:15:45.14:0,45,653	0/0:20,0:20:60.20:0,60,898	0/0:20,0:20:60.20:0,60,897	0/0:7,0:7:18.06:0,18,270
chr10	18719504	.	T	TCAG	2175.42	PASS	AB=0.941;AC=5;AF=0.089;AN=56;BaseQRankSum=10.273;DP=514;FS=0.626;HRun=0;HaplotypeScore=82.0710;InbreedingCoeff=0.7479;MQ=67.79;MQ0=0;MQRankSum=-1.081;QD=36.87;ReadPosRankSum=3.061;VQSLOD=4.4576;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,27:30:78.26:1541,78,0	0/0:4,0:4:12.03:0,12,193	0/0:4,0:5:15.01:0,15,228	0/0:8,0:7:10.73:0,11,221	0/0:16,0:16:48.15:0,48,857	0/0:17,0:17:42.13:0,42,750	0/0:38,0:38:99:0,108,1923	0/0:15,0:15:45.15:0,45,797	1/1:1,12:13:39.13:744,39,0	0/0:15,0:15:42.14:0,42,765	0/0:8,0:8:24.08:0,24,439	0/0:31,0:31:90.28:0,90,1604	0/0:13,0:13:30.10:0,30,558	0/0:26,0:26:78.27:0,78,1435	0/0:11,0:11:30.10:0,30,556	0/1:15,1:16:20.49:20,0,738	0/0:47,0:46:99:0,135,2471	0/0:21,0:21:63.22:0,63,1162	0/0:13,0:13:36.12:0,36,658	0/0:9,0:9:24.08:0,24,447	0/0:39,0:39:99:0,108,1986	0/0:12,0:12:36.12:0,36,671	0/0:10,0:10:27.09:0,27,503	0/0:33,0:33:96.31:0,96,1726	0/0:15,0:15:45.14:0,45,796	0/0:20,0:20:60.21:0,60,1109	0/0:22,0:22:63.19:0,63,1141	0/0:7,0:7:18.06:0,18,336
chr10	18720344	.	G	GCTAT	18186.80	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-7.027;DP=787;FS=0.930;HRun=0;HaplotypeScore=147.5220;InbreedingCoeff=0.9994;MQ=87.86;MQ0=0;MQRankSum=-5.455;QD=57.92;ReadPosRankSum=4.955;VQSLOD=5.8334;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,162,2797	1/1:1,12:14:39.13:1017,39,0	0/0:28,0:28:63.22:0,63,1115	0/0:31,0:31:62.92:0,63,1060	1/1:5,27:33:78.27:2013,78,0	0/0:35,0:35:93.32:0,93,1681	0/0:21,0:21:60.14:0,60,970	0/0:30,0:30:84.28:0,84,1482	0/0:32,0:32:84.26:0,84,1453	1/1:10,20:33:84.29:2113,84,0	1/1:6,17:24:51.18:1334,51,0	0/0:30,0:30:81.25:0,81,1413	1/1:2,20:23:66.23:1725,66,0	1/1:8,24:32:63.22:1647,63,0	0/0:31,0:31:90.28:0,90,1568	0/0:29,0:29:87.27:0,87,1518	1/1:6,24:32:69.24:1806,69,0	0/0:10,0:10:30.10:0,30,544	0/0:28,0:28:75.25:0,75,1330	0/0:25,0:25:66.21:0,66,1170	0/0:42,0:42:99:0,114,2063	0/0:27,0:27:72.25:0,72,1309	1/1:5,18:24:45.15:1177,45,0	1/1:7,30:37:81.28:2119,81,0	0/0:20,0:20:54.17:0,54,951	1/1:10,18:28:54.16:1357,54,0	1/1:7,16:24:51.18:1330,51,0	1/1:0,10:10:21.07:550,21,0
chr10	18720812	.	GGAA	G	20775.12	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-1.744;DP=556;FS=0.000;HRun=0;HaplotypeScore=94.5881;InbreedingCoeff=0.9853;MQ=80.62;MQ0=0;MQRankSum=-9.166;QD=40.18;ReadPosRankSum=6.599;VQSLOD=5.2276;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,35:38:90.30:1413,90,0	1/1:3,7:10:21.07:337,21,0	0/0:17,0:17:39.13:0,39,803	0/0:22,0:22:51.12:0,51,975	1/1:3,15:18:39.13:627,39,0	1/1:4,11:15:27.09:434,27,0	1/1:1,26:27:69.24:1109,69,0	1/1:2,31:33:90.31:1442,90,0	1/1:0,25:25:69.24:1109,69,0	1/1:1,15:16:45.15:723,45,0	1/1:1,13:14:36.12:578,36,0	1/1:1,25:26:75.21:1175,75,0	1/1:0,12:12:33.11:530,33,0	1/1:2,21:23:63.21:988,63,0	1/1:1,23:24:66.23:1061,66,0	1/1:0,15:15:45.15:723,45,0	1/1:2,18:20:48.16:771,48,0	1/1:2,16:18:39.13:626,39,0	1/1:2,9:11:24.08:377,24,0	1/1:1,23:24:66.22:1060,66,0	1/1:3,37:40:99:1581,99,0	1/1:2,13:15:27.09:423,27,0	1/1:0,8:8:21.07:326,21,0	1/1:1,24:25:44.93:723,45,0	1/1:1,12:13:33.11:519,33,0	1/1:0,26:26:78.27:1253,78,0	1/1:1,14:15:39.13:626,39,0	1/1:1,5:6:15.05:241,15,0
chr10	18720962	.	C	CT	2781.09	PASS	AB=0.917;AC=5;AF=0.089;AN=56;BaseQRankSum=8.147;DP=567;FS=0.486;HRun=1;HaplotypeScore=64.0691;InbreedingCoeff=0.7846;MQ=78.38;MQ0=0;MQRankSum=-0.611;QD=33.92;ReadPosRankSum=1.038;VQSLOD=3.4235;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,40:40:99:1619,108,0	0/0:6,0:6:18.06:0,18,234	0/0:15,0:15:29.15:0,29,397	0/0:13,0:13:30.05:0,30,356	0/0:21,0:21:60.19:0,60,778	0/0:14,0:14:39.13:0,39,506	0/0:41,0:41:99:0,117,1503	0/0:17,0:17:51.16:0,51,646	1/1:1,30:31:87.25:1279,87,0	0/0:17,0:17:48.14:0,48,601	0/0:12,0:12:36.12:0,36,466	0/0:17,0:17:51.17:0,51,662	0/0:12,0:11:33.09:0,33,412	0/0:25,0:25:72.23:0,72,933	0/0:20,0:20:57.19:0,57,740	0/1:10,1:11:11.89:12,0,341	0/0:33,0:33:96.23:0,96,1196	0/0:26,0:26:75.24:0,75,974	0/0:10,0:10:27.56:0,28,351	0/0:17,0:17:51.17:0,51,661	0/0:38,0:38:99:0,111,1439	0/0:16,0:16:48.15:0,48,614	0/0:19,0:19:54.18:0,54,701	0/0:33,0:33:87.27:0,87,1116	0/0:16,0:16:48.16:0,48,623	0/0:32,0:32:93.30:0,93,1207	0/0:6,0:6:18.06:0,18,234	0/0:9,0:9:27.09:0,27,351
chr10	18721097	.	TG	T	9416.04	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-6.369;DP=479;FS=13.567;HRun=9;HaplotypeScore=55.8662;InbreedingCoeff=0.9353;MQ=69.25;MQ0=0;MQRankSum=-6.474;QD=20.92;ReadPosRankSum=5.253;VQSLOD=4.3006;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,31:37:87.05:796,87,0	1/1:0,5:5:9:82,9,0	0/0:13,0:11:26.96:0,27,280	0/0:16,0:14:32.80:0,33,307	1/1:3,12:15:36.02:329,36,0	1/1:0,18:18:48.03:439,48,0	1/1:4,20:24:51:460,51,0	1/1:4,14:18:36.01:330,36,0	1/1:0,15:15:45.02:412,45,0	1/1:1,13:14:39.02:357,39,0	1/1:2,9:11:21.01:192,21,0	1/1:1,10:11:30.02:274,30,0	1/1:6,15:21:10.32:349,10,0	1/1:3,17:19:45.02:412,45,0	1/1:2,11:13:29.91:273,30,0	1/1:3,8:11:21.01:192,21,0	1/1:2,23:25:60.03:549,60,0	1/1:4,12:16:30.01:275,30,0	1/1:3,12:15:29.99:267,30,0	1/1:2,17:19:42.01:384,42,0	1/1:4,24:28:69.03:631,69,0	1/1:0,16:16:42.02:384,42,0	1/1:7,13:20:30.01:274,30,0	1/1:5,20:25:60.03:549,60,0	1/1:3,12:15:27.01:247,27,0	1/1:3,17:20:57.03:520,57,0	1/1:0,5:5:15.01:137,15,0	1/1:2,11:13:32.38:301,32,0
chr10	18721206	.	GAA	G	1486.81	PASS	AB=1.000;AC=27;AF=0.482;AN=56;BaseQRankSum=-0.178;DP=459;FS=6.053;HRun=3;HaplotypeScore=123.9969;InbreedingCoeff=0.7405;MQ=53.38;MQ0=10;MQRankSum=1.120;QD=7.15;ReadPosRankSum=2.427;VQSLOD=0.4754;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:24.80:0,25,599	1/1:3,0:3:8.94:70,9,0	0/0:25,0:13:11.70:0,12,244	0/0:22,0:11:21.48:0,21,183	1/1:8,0:7:6.73:47,7,0	0/1:19,0:19:4.14:4,0,240	0/0:16,0:16:26.49:0,26,216	0/0:26,0:24:27.64:0,28,405	0/0:10,0:10:23.69:0,24,186	1/1:10,0:9:15.01:87,15,0	1/1:11,0:10:8.91:66,9,0	0/0:14,0:13:26.61:0,27,247	1/1:12,0:11:20.47:157,20,0	1/1:17,1:16:22.02:158,22,0	0/0:16,0:15:23.02:0,23,145	0/0:12,0:12:24:0,24,172	1/1:26,3:29:47.23:430,47,0	0/0:14,0:13:9.63:0,10,162	0/0:13,0:12:21.45:0,21,212	0/0:15,0:14:11.67:0,12,137	0/0:35,0:33:54.28:0,54,565	0/1:19,0:19:22.99:23,0,170	1/1:10,0:10:14.91:116,15,0	1/1:22,1:22:8.96:90,9,0	0/1:13,0:13:48.16:48,0,92	1/1:15,0:13:24.21:167,24,0	1/1:9,0:9:20.69:141,21,0	1/1:9,0:7:14.14:98,14,0
chr10	18721226	.	GGAGAGGGTGTA	G	7573.03	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=5.309;DP=438;FS=3.665;HRun=0;HaplotypeScore=161.3999;InbreedingCoeff=0.9679;MQ=65.85;MQ0=2;MQRankSum=-10.646;QD=73.52;ReadPosRankSum=2.617;VQSLOD=4.4880;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:93.30:0,93,4913	0/0:4,0:4:9.03:0,9,516	0/0:34,0:29:52.20:0,52,3048	0/0:32,0:23:18.86:0,19,1841	0/0:7,0:7:12.04:0,12,633	1/1:2,17:19:42.10:1411,42,0	1/1:1,16:17:39.13:1352,39,0	0/0:33,0:32:90.30:0,90,4221	0/0:9,0:9:24.08:0,24,1261	0/0:6,0:5:12.02:0,12,320	0/0:10,0:10:15.03:0,15,663	1/1:4,7:11:24.54:724,25,0	0/0:16,0:15:45.15:0,45,2294	0/0:15,0:13:35.84:0,36,1899	1/1:1,10:11:21.07:731,21,0	1/1:2,9:11:30.10:1070,30,0	0/0:17,0:17:45.15:0,45,2336	1/1:1,10:11:18.06:641,18,0	0/0:13,0:12:36.12:0,36,1443	0/0:10,0:10:30.10:0,30,1263	0/0:37,0:37:92.61:0,93,4834	1/1:1,11:12:27.09:901,27,0	0/0:11,0:11:21.02:0,21,1068	0/0:24,0:24:27.98:0,28,1173	1/1:0,11:10:21.07:742,21,0	0/0:11,0:11:30.07:0,30,1250	0/0:5,0:5:15.05:0,15,702	0/0:7,0:6:18.06:0,18,911
chr10	18721491	.	TGAGTGTTAGGAA	T	14153.43	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=17.318;DP=528;FS=33.999;HRun=0;HaplotypeScore=219.8836;InbreedingCoeff=0.9976;MQ=94.47;MQ0=1;MQRankSum=-16.532;QD=94.99;ReadPosRankSum=4.816;VQSLOD=3.2182;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:87.30:0,87,5397	1/1:1,5:6:18.06:573,18,0	0/0:32,0:32:92.82:0,93,4310	0/0:22,0:22:63.17:0,63,2916	1/1:0,16:16:45.15:1508,45,0	0/0:20,0:20:60.21:0,60,3628	0/0:20,0:20:60.21:0,60,3645	0/0:34,0:34:96.32:0,96,5659	0/0:25,0:25:75.26:0,75,4622	1/1:0,19:19:57.20:1974,57,0	1/1:0,9:9:27.09:838,27,0	0/0:25,0:25:72.25:0,72,4174	1/1:0,10:10:30.10:1013,30,0	1/1:1,18:19:57.20:1923,57,0	0/0:19,0:19:57.18:0,57,3417	0/0:25,0:25:75.26:0,75,4525	1/1:1,6:7:21.07:680,21,0	0/0:10,0:10:30.10:0,30,1806	0/0:23,0:23:69.21:0,69,3656	0/0:27,0:27:81.26:0,81,4692	0/0:22,0:22:66.21:0,66,3592	0/0:21,0:21:60.19:0,60,3347	1/1:0,10:10:30.10:996,30,0	1/1:2,10:12:24.55:774,25,0	0/0:25,0:25:72.24:0,72,4350	1/1:2,12:13:39.13:1291,39,0	1/1:0,17:17:51.18:1732,51,0	1/1:3,7:10:30.10:852,30,0
chr10	18721501	.	GAA	G	2752.99	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=18.027;DP=535;FS=10.128;HRun=2;HaplotypeScore=157.4967;InbreedingCoeff=0.9965;MQ=86.80;MQ0=0;MQRankSum=-16.283;QD=16.48;ReadPosRankSum=3.486;VQSLOD=0.4834;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:96.29:0,96,1889	1/1:5,0:5:14.20:70,14,0	0/0:25,0:25:71.61:0,72,1351	0/0:17,0:18:51.17:0,51,974	1/1:16,4:20:49.58:372,50,0	0/0:24,0:24:69.18:0,69,1324	0/0:21,0:21:63.22:0,63,1257	0/0:36,0:36:99:0,105,2112	0/0:24,0:24:72.25:0,72,1452	1/1:21,1:21:59.99:356,60,0	1/1:9,0:9:25.88:150,26,0	0/0:23,0:23:69.18:0,69,1324	1/1:10,1:11:31.42:188,31,0	1/1:19,0:19:53.97:266,54,0	0/0:20,0:20:60.20:0,60,1156	0/0:26,0:26:78.26:0,78,1550	1/1:6,2:8:23.06:165,23,0	0/0:10,0:10:30.10:0,30,610	0/0:19,0:19:57.17:0,57,1073	0/0:27,0:27:81.28:0,81,1633	0/0:21,0:21:63.22:0,63,1270	0/0:19,0:19:54.03:0,54,1000	1/1:10,1:11:26.93:166,27,0	1/1:11,5:16:35.33:328,35,0	0/0:23,0:23:69.20:0,69,1297	1/1:12,2:13:37.10:212,37,0	1/1:18,2:20:57.39:384,57,0	1/1:7,5:12:34.94:325,35,0
chr10	18721504	.	CAT	C	4408.77	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=18.147;DP=549;FS=5.389;HRun=0;HaplotypeScore=155.4043;InbreedingCoeff=0.9972;MQ=87.43;MQ0=0;MQRankSum=-15.931;QD=24.91;ReadPosRankSum=2.435;VQSLOD=5.6499;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:93.22:0,93,1656	1/1:0,5:5:15.01:136,15,0	0/0:27,0:27:59.55:0,60,1188	0/0:18,0:18:51.15:0,51,860	1/1:5,16:21:53.96:467,54,0	0/0:23,0:23:66.23:0,66,1235	0/0:22,0:22:63.18:0,63,1114	0/0:37,0:37:99:0,105,1842	0/0:25,0:25:75.26:0,75,1396	1/1:4,19:22:59.35:604,59,0	1/1:0,9:9:27:239,27,0	0/0:22,0:22:63.22:0,63,1179	1/1:3,10:13:33.01:299,33,0	1/1:2,18:20:59.97:529,60,0	0/0:19,0:19:57.18:0,57,1034	0/0:26,0:26:78.27:0,78,1442	1/1:3,6:9:24.01:218,24,0	0/0:12,0:12:36.11:0,36,642	0/0:16,0:16:42.14:0,42,787	0/0:29,0:29:87.28:0,87,1584	0/0:21,0:21:60.17:0,60,1059	0/0:19,0:19:48.16:0,48,896	1/1:1,10:11:29.84:252,30,0	1/1:6,10:16:35.98:313,36,0	0/0:23,0:23:63.18:0,63,1109	1/1:2,12:13:39.05:375,39,0	1/1:4,17:21:63.02:569,63,0	1/1:8,7:15:45.02:408,45,0
chr10	18721506	.	T	TC	3573.09	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=17.853;DP=574;FS=8.780;HRun=0;HaplotypeScore=154.9773;InbreedingCoeff=0.9967;MQ=85.86;MQ0=0;MQRankSum=-16.365;QD=18.14;ReadPosRankSum=2.158;VQSLOD=5.0781;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:93.28:0,93,1274	1/1:6,0:6:13.72:60,14,0	0/0:25,0:25:46.07:0,46,936	0/0:20,0:20:57.04:0,57,733	1/1:20,4:24:50.71:380,51,0	0/0:26,0:26:69.22:0,69,948	0/0:24,0:24:69.18:0,69,910	0/0:38,0:38:99:0,111,1473	0/0:25,0:25:75.25:0,75,1049	1/1:21,4:24:66.10:454,66,0	1/1:10,0:10:27.82:166,28,0	0/0:23,0:23:69.20:0,69,931	1/1:11,3:14:36.13:259,36,0	1/1:22,1:23:57.13:316,57,0	0/0:20,0:20:57.19:0,57,796	0/0:27,0:27:81.26:0,81,1115	1/1:10,2:12:28.56:231,29,0	0/0:12,0:12:36.12:0,36,502	0/0:16,0:16:45.14:0,45,614	0/0:29,0:29:87.29:0,87,1214	0/0:20,0:20:60.17:0,60,803	0/0:18,0:18:48.16:0,48,670	1/1:11,1:12:29:172,29,0	1/1:13,5:18:37.55:370,38,0	0/0:22,0:22:63.19:0,63,860	1/1:15,2:16:42.87:296,43,0	1/1:19,2:21:58.84:401,59,0	1/1:10,5:15:43.66:468,44,0
chr10	18722090	.	AGAAGC	A	6143.67	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=15.857;DP=577;FS=7.327;HRun=0;HaplotypeScore=179.5024;InbreedingCoeff=0.9984;MQ=81.63;MQ0=0;MQRankSum=-14.921;QD=48.00;ReadPosRankSum=2.568;VQSLOD=4.7263;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,120,3992	0/0:9,0:9:27.09:0,27,899	0/0:20,0:20:49.02:0,49,1414	0/0:19,0:19:52.02:0,52,1470	0/0:14,0:14:39.13:0,39,1251	1/1:2,16:18:51.12:829,51,0	1/1:1,24:25:72.25:1244,72,0	0/0:26,0:26:78.27:0,78,2511	0/0:24,0:24:72.25:0,72,2348	0/0:23,0:23:69.24:0,69,2250	0/0:18,0:18:51.18:0,51,1648	1/1:0,14:14:42.14:731,42,0	0/0:17,0:17:51.16:0,51,1554	0/0:20,0:20:60.21:0,60,1993	1/1:2,22:24:72.22:1196,72,0	1/1:2,10:12:36.09:573,36,0	0/0:34,0:34:99:0,99,3122	1/1:0,6:6:18.06:315,18,0	0/0:22,0:22:66.21:0,66,2114	0/0:15,0:15:45.15:0,45,1413	0/0:29,0:29:87.27:0,87,2694	1/1:2,13:15:33.10:535,33,0	0/0:19,0:19:54.18:0,54,1593	0/0:29,0:29:87.30:0,87,2836	1/1:1,13:14:42.14:720,42,0	0/0:32,0:32:96.33:0,96,3047	0/0:27,0:27:81.28:0,81,2617	0/0:12,0:12:36.12:0,36,1198
chr10	18722097	.	ATGT	A	4330.06	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=16.482;DP=566;FS=5.337;HRun=0;HaplotypeScore=157.7911;InbreedingCoeff=0.9983;MQ=79.72;MQ0=0;MQRankSum=-15.292;QD=36.39;ReadPosRankSum=3.384;VQSLOD=5.3199;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,123,2942	0/0:9,0:9:27.08:0,27,616	0/0:17,0:17:40.22:0,40,904	0/0:17,0:17:48.10:0,48,933	0/0:18,0:18:51.18:0,51,1251	1/1:0,16:16:45.15:575,45,0	1/1:1,23:24:72.23:902,72,0	0/0:26,0:26:78.26:0,78,1795	0/0:24,0:24:72.25:0,72,1747	0/0:23,0:23:69.18:0,69,1643	0/0:18,0:18:51.18:0,51,1233	1/1:0,14:14:42.14:536,42,0	0/0:17,0:17:51.18:0,51,1242	0/0:20,0:20:60.19:0,60,1428	1/1:0,22:22:66.21:840,66,0	1/1:0,10:10:30.10:385,30,0	0/0:34,0:34:96.33:0,96,2305	1/1:0,6:6:18.06:232,18,0	0/0:20,0:20:60.20:0,60,1421	0/0:15,0:15:42.14:0,42,995	0/0:29,0:29:87.28:0,87,2068	1/1:0,14:14:30.09:373,30,0	0/0:18,0:18:48.16:0,48,1180	0/0:30,0:30:84.29:0,84,2064	1/1:0,13:13:39.12:487,39,0	0/0:31,0:31:93.32:0,93,2209	0/0:28,0:28:84.26:0,84,1918	0/0:12,0:12:36.08:0,36,832
chr10	18722324	.	TG	T	14252.35	PASS	AB=0.964;AC=52;AF=0.963;AN=54;BaseQRankSum=2.901;DP=516;FS=3.710;HRun=1;HaplotypeScore=216.0228;InbreedingCoeff=-0.0389;MQ=65.16;MQ0=1;MQRankSum=-5.300;QD=27.62;ReadPosRankSum=6.134;VQSLOD=4.4343;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:45,0:44:86.99:637,87,0	./.	0/1:16,0:15:79.24:79,0,90	0/1:12,0:13:69.92:70,0,96	1/1:0,15:15:36.08:478,36,0	1/1:0,11:11:33.11:460,33,0	1/1:1,18:18:54.18:751,54,0	1/1:28,0:28:39.10:297,39,0	1/1:37,0:37:35.28:533,35,0	1/1:4,12:15:42.09:559,42,0	1/1:2,15:17:45.07:587,45,0	1/1:0,21:21:60.20:824,60,0	1/1:3,10:13:39.13:530,39,0	1/1:3,19:22:63.20:860,63,0	1/1:1,15:16:48.16:662,48,0	1/1:2,17:19:57.14:771,57,0	1/1:2,22:24:63.13:824,63,0	1/1:1,18:19:57.19:789,57,0	1/1:24,0:24:40.62:279,41,0	1/1:24,0:24:48.57:368,49,0	1/1:13,0:13:29.38:172,29,0	1/1:1,10:11:27.09:370,27,0	1/1:0,13:13:33.11:445,33,0	1/1:2,13:15:21.05:292,21,0	1/1:0,14:14:39.13:542,39,0	1/1:2,20:22:66.21:891,66,0	1/1:0,22:22:65.89:888,66,0	1/1:0,7:7:21.07:293,21,0
chr10	18722539	.	T	TACACACAC	3673.60	PASS	AB=0.965;AC=38;AF=0.731;AN=52;BaseQRankSum=1.631;DP=532;FS=0.887;HRun=0;HaplotypeScore=171.3713;InbreedingCoeff=0.2178;MQ=65.02;MQ0=15;MQRankSum=-2.266;QD=9.96;ReadPosRankSum=-1.179;VQSLOD=2.7144;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	1/1:10,0:10:1.18:16,1,0	0/0:36,0:21:3.01:0,3,72	0/0:43,0:33:6.02:0,6,122	0/0:18,0:16:3.01:0,3,38	./.	1/1:20,0:20:15.45:314,15,0	0/1:18,0:18:34.30:34,0,78	0/1:28,0:27:37.44:37,0,292	1/1:26,0:24:19.77:349,20,0	1/1:19,0:18:0.65:42,1,0	1/1:11,1:17:12.04:206,12,0	1/1:22,0:22:27.01:715,27,0	1/1:18,0:18:3.63:131,4,0	1/1:16,0:17:12.02:252,12,0	0/1:11,4:15:17.14:238,0,17	1/1:10,0:10:3.01:74,3,0	1/1:4,0:4:3.01:83,3,0	0/1:14,0:14:8.80:9,0,242	0/1:13,0:13:0.51:1,0,225	0/0:14,0:12:5.54:0,6,84	1/1:15,1:15:6.02:188,6,0	0/1:11,0:10:0:0,0,0	1/1:21,0:21:5.64:49,6,0	1/1:17,0:17:7.88:221,8,0	1/1:23,0:21:22.53:392,23,0	1/1:10,0:10:3.01:100,3,0	1/1:15,0:15:9.89:223,10,0
chr10	18722563	.	C	CACACACACACACACAT	3654.47	PASS	AB=0.954;AC=25;AF=0.463;AN=54;BaseQRankSum=2.852;DP=483;FS=12.438;HRun=0;HaplotypeScore=186.0571;InbreedingCoeff=0.3327;MQ=38.01;MQ0=19;MQRankSum=-1.498;QD=13.34;ReadPosRankSum=1.418;VQSLOD=1.8231;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:37:11.60:0,12,97	1/1:9,0:9:2.96:19,3,0	0/0:21,0:10:8.94:0,9,123	0/0:27,0:12:12:0,12,239	0/1:19,0:17:3.94:4,0,50	./.	1/1:18,0:15:12.14:95,12,0	0/0:24,0:24:24.74:0,25,392	0/0:22,0:21:12.01:0,12,771	0/1:29,1:27:37.97:682,0,38	1/1:20,0:19:3.95:66,4,0	0/0:12,0:12:7.75:0,8,62	1/1:20,2:21:23.44:895,23,0	0/1:18,0:17:12.78:92,0,13	0/1:13,0:13:11.94:31,0,12	0/1:18,0:18:90.64:120,0,91	1/1:10,0:9:8.92:115,9,0	0/0:6,0:5:1.82:0,2,19	0/0:19,0:18:5.64:0,6,570	0/0:12,0:12:14.93:0,15,443	0/0:9,0:7:5.80:0,6,120	1/1:14,0:12:5.44:25,5,0	0/0:10,0:9:0.88:0,1,2	1/1:23,0:23:6.54:49,7,0	1/1:9,0:9:11.97:138,12,0	0/1:22,0:18:1.26:790,0,1	1/1:12,0:11:9.03:201,9,0	0/1:11,4:16:7.19:331,0,7
chr10	18722587	.	G	GAGAGAGAGAGAA	5816.80	PASS	AB=1.000;AC=37;AF=0.661;AN=56;BaseQRankSum=0.575;DP=563;FS=32.506;HRun=0;HaplotypeScore=164.1436;InbreedingCoeff=0.1727;MQ=48.87;MQ0=14;MQRankSum=-0.560;QD=12.87;ReadPosRankSum=-2.674;VQSLOD=1.8322;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:27:24.90:0,25,566	0/1:5,0:5:0:0,0,0	0/0:17,0:11:30:0,30,556	0/0:30,0:19:42.64:0,43,716	0/0:18,0:16:2.85:0,3,39	1/1:14,0:14:20.90:230,21,0	1/1:31,0:28:29.38:784,29,0	0/1:43,0:41:86.64:930,0,87	0/1:26,0:25:99:153,0,108	0/1:15,0:12:38.73:266,0,39	1/1:15,0:15:0.47:1,0,0	1/1:22,0:22:30.40:474,30,0	1/1:23,0:23:14.96:357,15,0	0/1:18,0:17:24.35:44,0,24	1/1:8,0:24:0.47:1,0,0	1/1:10,13:26:5.76:42,6,0	1/1:8,0:7:6.02:239,6,0	1/1:5,0:4:8.96:183,9,0	0/1:29,0:28:41.29:731,0,41	1/1:10,0:25:22.29:218,22,0	1/1:15,0:14:20.98:243,21,0	1/1:8,0:17:8.80:59,9,0	1/1:16,0:16:0.83:1,1,0	0/0:18,0:18:0.47:0,0,1	1/1:4,11:22:2.97:20,3,0	0/1:17,0:14:32.61:493,0,33	0/1:18,0:17:12.94:125,0,13	0/1:16,0:16:61.03:222,0,61
chr10	18722589	.	G	GAGAGAGAGAGAGAA	7782.20	PASS	AB=0.970;AC=35;AF=0.625;AN=56;BaseQRankSum=3.114;DP=606;FS=7.303;HRun=0;HaplotypeScore=211.8311;InbreedingCoeff=-0.0469;MQ=50.49;MQ0=11;MQRankSum=-5.733;QD=15.17;ReadPosRankSum=3.153;VQSLOD=3.0166;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:27:25.29:0,25,640	1/1:3,2:6:3.45:22,3,0	0/0:17,0:11:32.30:0,32,568	0/0:31,0:20:41.39:0,41,728	0/1:8,0:20:5.39:59,0,5	0/1:13,0:13:47.57:48,0,108	0/1:31,0:28:99:517,0,194	0/1:43,0:41:99:607,0,157	0/1:27,0:26:99:186,0,120	1/1:10,0:16:30.04:1031,30,0	1/1:9,11:22:9.37:61,9,0	0/1:22,0:22:73.63:478,0,74	1/1:8,1:25:18.01:536,18,0	1/1:9,14:24:11.95:306,12,0	0/1:24,0:24:11.49:35,0,11	0/1:27,0:27:20.19:401,0,20	1/1:1,1:9:6.02:316,6,0	0/1:4,0:4:31.82:122,0,32	0/1:30,0:29:87.17:737,0,87	0/1:28,0:26:72.74:73,0,81	0/1:15,0:15:4.64:5,0,95	0/0:17,0:17:9.24:0,9,51	1/1:3,0:20:4.19:21,4,0	1/1:4,0:23:2.57:19,3,0	0/1:22,0:22:30.90:31,0,32	1/1:10,0:19:47.96:1052,48,0	1/1:2,0:17:6.02:231,6,0	1/1:15,0:16:36.03:890,36,0
chr10	18723591	.	GCAGGAGGAC	G	13842.37	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=17.102;DP=593;FS=3.021;HRun=0;HaplotypeScore=174.9207;InbreedingCoeff=0.9766;MQ=82.11;MQ0=0;MQRankSum=-17.540;QD=72.85;ReadPosRankSum=3.966;VQSLOD=5.1194;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,132,6301	1/1:0,2:2:6.02:189,6,0	0/0:22,0:22:66.21:0,66,3033	0/0:25,0:25:57.17:0,57,2316	1/1:1,26:27:57.20:1752,57,0	0/0:16,0:16:48.15:0,48,2184	0/0:28,0:28:84.27:0,84,3873	0/0:32,0:32:93.31:0,93,4374	0/0:27,0:27:81.28:0,81,3953	1/1:2,14:16:42.12:1254,42,0	1/1:1,11:12:30.10:947,30,0	0/0:17,0:17:51.18:0,51,2356	1/1:0,10:10:21.07:663,21,0	1/1:1,20:21:54.19:1705,54,0	0/0:18,0:18:54.19:0,54,2656	0/0:23,0:23:69.22:0,69,3216	1/1:2,15:17:45.15:1422,45,0	0/0:26,0:26:78.27:0,78,3721	0/0:22,0:22:60.21:0,60,2883	0/0:23,0:23:69.22:0,69,3285	0/0:29,0:29:87.28:0,87,4058	0/0:22,0:22:63.17:0,63,2623	1/1:2,18:20:42.05:1326,42,0	1/1:2,17:19:39.13:1173,39,0	0/0:26,0:26:78.27:0,78,3872	1/1:1,17:18:51.18:1611,51,0	1/1:2,20:22:48.16:1516,48,0	1/1:0,6:6:9.03:284,9,0
chr10	18725553	.	C	CAA	5195.24	PASS	AB=0.628;AC=43;AF=0.768;AN=56;BaseQRankSum=-5.941;DP=533;FS=2.872;HRun=14;HaplotypeScore=90.9677;InbreedingCoeff=0.3724;MQ=53.63;MQ0=7;MQRankSum=-1.439;QD=11.29;ReadPosRankSum=-2.110;VQSLOD=3.6035;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:41:51.17:0,51,263	1/1:4,2:7:8.34:67,8,0	0/0:7,0:6:4.10:0,4,14	0/0:6,0:5:8.74:0,9,66	1/1:9,13:22:33.45:391,33,0	1/1:6,6:14:13.74:116,14,0	1/1:5,10:17:24.64:266,25,0	0/1:10,0:25:16.35:70,0,16	0/0:3,0:17:13.34:0,13,97	1/1:9,15:26:15.71:401,16,0	1/1:17,9:30:27.14:412,27,0	1/1:4,8:11:7.78:63,8,0	0/1:4,6:9:12.27:29,0,12	1/1:1,9:11:14.45:127,14,0	1/1:7,4:20:5.52:214,6,0	0/1:6,8:13:7.05:178,0,7	1/1:14,20:36:48.49:556,48,0	1/1:3,1:14:12.91:130,13,0	1/1:6,1:16:21.59:76,22,0	0/1:5,2:20:64.18:104,0,64	0/1:9,1:17:48.96:49,0,53	1/1:8,4:13:15.67:125,16,0	1/1:8,15:24:3.76:273,4,0	1/1:12,10:21:4.48:298,4,0	1/1:7,10:19:25.72:248,26,0	1/1:3,13:20:38.85:411,39,0	1/1:17,3:21:34.37:292,34,0	1/1:8,9:16:28.18:300,28,0
chr10	18726386	.	GC	G	6955.33	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=13.204;DP=723;FS=5.186;HRun=3;HaplotypeScore=66.9465;InbreedingCoeff=0.9896;MQ=81.40;MQ0=0;MQRankSum=-2.299;QD=32.50;ReadPosRankSum=2.532;VQSLOD=5.2986;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,159,2235	0/0:7,0:7:21.06:0,21,284	0/0:19,0:19:51.17:0,51,728	0/0:18,0:18:48.13:0,48,648	0/0:24,0:24:72.22:0,72,1000	1/1:0,23:23:60.19:744,60,0	1/1:3,31:34:90.28:1116,90,0	0/0:35,0:35:99:0,99,1409	0/0:26,0:26:78.26:0,78,1122	0/0:36,0:36:99:0,105,1484	0/0:16,0:15:42.13:0,42,587	1/1:0,28:28:72.23:893,72,0	0/0:25,0:25:75.20:0,75,1022	0/0:13,0:13:39.13:0,39,555	1/1:0,29:29:75.24:930,75,0	1/1:2,25:27:69.22:856,69,0	0/0:25,0:25:72.24:0,72,1036	1/1:1,20:21:51.16:632,51,0	0/0:20,0:20:51.17:0,51,734	0/0:32,0:32:96.32:0,96,1382	0/0:48,0:48:99:0,132,1880	1/1:1,27:28:75.24:930,75,0	0/0:16,0:16:45.15:0,45,647	0/0:24,0:24:72.22:0,72,1018	1/1:0,24:24:69.22:855,69,0	0/0:32,0:32:93.31:0,93,1340	0/0:36,0:36:99:0,108,1552	0/0:4,0:4:9.01:0,9,110
chr10	18727621	.	T	TA	1992.22	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-7.582;DP=540;FS=3.266;HRun=3;HaplotypeScore=76.4102;InbreedingCoeff=0.9114;MQ=80.55;MQ0=3;MQRankSum=-1.897;QD=32.13;ReadPosRankSum=-2.156;VQSLOD=3.0687;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:27:74.89:0,75,780	0/0:12,0:12:32.88:0,33,373	0/0:38,0:26:62.15:0,62,707	0/0:44,0:30:77.58:0,78,861	0/0:10,0:10:24.07:0,24,285	0/0:21,0:21:54.13:0,54,612	0/0:36,0:36:84.68:0,85,971	1/1:1,22:23:66.21:907,66,0	0/0:26,0:25:75.14:0,75,870	0/0:15,0:15:45.13:0,45,523	0/0:2,0:2:6.02:0,6,72	0/0:12,0:12:36.11:0,36,432	0/0:20,0:20:52.04:0,52,612	0/0:17,0:16:33.09:0,33,386	0/0:22,0:22:60.18:0,60,712	0/0:26,0:26:72.18:0,72,830	0/0:23,0:23:51.15:0,51,601	0/0:17,0:17:51.14:0,51,599	1/1:0,8:8:24.04:286,24,0	1/1:0,7:7:21.07:294,21,0	1/1:2,22:23:2.34:655,2,0	0/0:18,0:18:51.16:0,51,610	0/0:9,0:9:20.75:0,21,241	0/0:30,0:30:74.50:0,74,873	0/0:13,0:13:30.06:0,30,345	0/0:15,0:15:42.12:0,42,494	0/0:13,0:13:39.12:0,39,468	0/0:10,0:10:27.06:0,27,305
chr10	18727637	.	A	AGT	1985.35	PASS	AB=0.879;AC=24;AF=0.462;AN=52;BaseQRankSum=-3.361;DP=573;FS=2.982;HRun=0;HaplotypeScore=98.1774;InbreedingCoeff=0.1417;MQ=65.20;MQ0=12;MQRankSum=0.031;QD=6.38;ReadPosRankSum=-1.633;VQSLOD=2.5779;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:30:7.70:140,0,8	0/1:4,6:10:23.12:81,0,23	./.	./.	1/1:13,0:13:6.02:90,6,0	0/0:15,0:15:20.71:0,21,201	0/0:24,0:31:28.52:0,29,246	1/1:36,0:34:13.63:128,14,0	0/0:17,0:23:19.84:0,20,96	0/1:16,1:17:24.99:178,0,25	1/1:3,1:4:3.01:45,3,0	0/0:16,0:16:17.99:0,18,199	0/1:9,9:19:23.11:206,0,23	1/1:11,8:19:8.76:135,9,0	0/0:16,0:19:20.65:0,21,185	0/0:25,0:27:35.25:0,35,369	0/1:15,10:25:99:279,0,99	0/0:16,0:18:15.78:0,16,154	0/1:7,0:7:10.71:11,0,16	1/1:16,0:16:7.88:79,8,0	1/1:22,0:21:5.78:43,6,0	0/0:19,0:21:17.88:0,18,180	0/1:10,0:10:24.23:33,0,24	1/1:14,17:33:8.98:515,9,0	0/0:13,0:13:13.83:0,14,129	0/1:16,1:17:37.93:38,0,56	0/1:14,1:15:81.46:84,0,81	0/1:15,1:15:53.74:76,0,54
chr10	18727689	.	TGAGAGA	T	643.40	PASS	AB=0.917;AC=31;AF=0.775;AN=40;BaseQRankSum=1.364;DP=445;FS=5.315;HRun=0;HaplotypeScore=112.1454;InbreedingCoeff=0.2649;MQ=54.66;MQ0=9;MQRankSum=-1.146;QD=2.12;ReadPosRankSum=0.818;VQSLOD=1.7513;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:17,0:23:0:0,0,0	./.	./.	./.	./.	1/1:9,1:11:3.01:60,3,0	1/1:31,1:32:2.25:45,2,0	./.	1/1:13,2:15:0.47:1,0,0	0/0:14,0:13:0.47:0,0,1	0/0:5,0:6:0.47:0,0,1	1/1:14,2:16:3.01:60,3,0	1/1:13,0:13:2.78:60,3,0	1/1:11,0:10:2.99:25,3,0	1/1:12,3:17:3.47:26,3,0	1/1:19,0:19:3.87:25,4,0	1/1:23,0:23:2.97:21,3,0	1/1:11,0:11:6:81,6,0	1/1:16,0:17:3.01:60,3,0	1/1:7,0:6:0.47:1,0,0	0/1:21,0:21:0.32:0,0,0	0/1:18,0:18:0:0,0,0	./.	1/1:29,1:32:8.26:124,8,0	./.	1/1:11,0:13:9.03:138,9,0	0/0:12,0:14:1.92:0,2,21	./.
chr10	18729267	.	CTGGCTTGCTCCCT	C	6822.75	PASS	AB=0.643;AC=15;AF=0.268;AN=56;BaseQRankSum=11.733;DP=634;FS=1.976;HRun=0;HaplotypeScore=220.6612;InbreedingCoeff=0.8851;MQ=61.66;MQ0=0;MQRankSum=-11.777;QD=41.10;ReadPosRankSum=3.411;VQSLOD=4.3554;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:54.19:0,54,2728	0/0:5,0:5:12.04:0,12,771	0/0:21,0:18:48.13:0,48,2307	0/0:19,0:18:45.15:0,45,2144	0/0:17,0:17:29:0,29,1821	1/1:8,11:19:21.07:811,21,0	1/1:6,6:12:9.03:338,9,0	0/0:29,0:29:51.18:0,51,2625	0/0:19,0:19:45.15:0,45,2577	0/0:22,0:21:45.15:0,45,2439	0/0:21,0:21:29.84:0,30,1921	1/1:16,21:37:37.01:1344,37,0	0/0:20,0:20:57.20:0,57,2921	0/0:23,0:23:48.15:0,48,2422	1/1:11,14:24:39.13:1506,39,0	1/1:12,15:27:33.11:1258,33,0	0/0:30,0:30:75.26:0,75,4021	0/1:4,5:9:23.29:441,0,23	0/0:20,0:20:33.10:0,33,1478	0/0:22,0:22:36:0,36,2089	0/0:54,0:54:96.31:0,96,5545	1/1:16,5:21:12.04:448,12,0	0/0:13,0:13:24.08:0,24,1238	0/0:26,0:26:61.09:0,61,3655	1/1:7,9:16:18.06:677,18,0	0/0:24,0:24:39.13:0,39,2072	0/0:29,0:28:72.25:0,72,3715	0/0:23,0:23:60.21:0,60,2877
chr10	18731406	.	G	GATAAAGTCTGTAAGATTCCAAG	1462.70	PASS	AB=0.613;AC=22;AF=0.917;AN=24;BaseQRankSum=-2.205;DP=29;FS=12.788;HRun=0;HaplotypeScore=30.2185;InbreedingCoeff=-0.2645;MQ=139.21;MQ0=0;MQRankSum=-1.197;QD=63.60;ReadPosRankSum=-0.315;VQSLOD=0.2364;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,0:2:3.01:49,3,0	./.	0/1:2,1:5:23.27:553,0,23	0/1:1,0:3:20.75:418,0,21	./.	./.	1/1:1,0:2:6.01:117,6,0	1/1:2,0:2:3.01:54,3,0	1/1:1,0:1:3:25,3,0	./.	./.	1/1:2,0:2:6.01:97,6,0	1/1:1,0:2:3.01:91,3,0	./.	./.	1/1:1,0:1:3:25,3,0	1/1:1,0:1:3.01:44,3,0	./.	./.	1/1:1,0:1:3:25,3,0	./.	1/1:1,0:1:3.01:50,3,0	./.	./.	./.	./.	./.	./.
chr10	18732265	.	TTCC	T	2461.61	PASS	AB=0.909;AC=22;AF=0.393;AN=56;BaseQRankSum=-7.812;DP=634;FS=0.374;HRun=0;HaplotypeScore=139.5561;InbreedingCoeff=0.0484;MQ=52.01;MQ0=23;MQRankSum=-4.730;QD=6.09;ReadPosRankSum=-5.028;VQSLOD=0.4200;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:30:62.46:0,62,726	0/1:8,3:11:70.09:70,0,200	0/0:6,0:1:2.99:0,3,24	0/0:4,0:2:6:0,6,52	0/1:28,5:26:99:146,0,464	0/1:21,0:19:14.15:14,0,261	0/1:9,9:18:99:220,0,150	1/1:38,0:35:60.82:320,61,0	1/1:20,0:19:19.27:319,19,0	0/1:37,0:35:86.13:86,0,629	0/0:19,0:18:19.63:0,20,329	0/1:26,1:27:96.22:96,0,376	0/1:23,0:22:89.15:89,0,307	0/1:26,1:25:22.48:22,0,275	0/0:31,0:31:59.59:0,60,528	0/0:27,0:26:38.98:0,39,381	0/0:23,0:22:30.27:0,30,372	0/0:22,0:21:17.65:0,18,237	1/1:14,7:18:30.49:249,30,0	1/1:24,0:24:7.14:292,7,0	1/1:22,0:18:12.79:204,13,0	0/1:9,4:13:99:123,0,191	0/1:12,1:12:33.23:33,0,143	0/1:27,1:27:31.14:31,0,264	0/0:25,0:24:14.63:0,15,480	0/1:28,0:27:99:330,0,480	0/0:21,0:21:63.02:0,63,781	0/0:21,0:20:56.88:0,57,535
chr10	18732268	.	C	CTCT	4336.29	PASS	AB=0.886;AC=39;AF=0.750;AN=52;BaseQRankSum=-4.472;DP=632;FS=0.000;HRun=0;HaplotypeScore=135.6501;InbreedingCoeff=-0.0887;MQ=52.14;MQ0=21;MQRankSum=-0.066;QD=7.24;ReadPosRankSum=0.835;VQSLOD=4.2604;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:29:64.33:64,0,255	1/1:11,0:11:6.02:100,6,0	./.	./.	0/1:30,3:26:64.28:333,0,64	0/1:9,13:20:33.60:51,0,34	1/1:16,0:16:17.95:261,18,0	1/1:35,0:32:18.55:87,19,0	0/1:21,0:20:0.74:1,0,92	0/1:36,0:37:99:171,0,151	0/1:20,0:19:58.38:89,0,58	1/1:14,12:26:19.94:317,20,0	1/1:13,9:21:12.03:202,12,0	1/1:14,12:24:12.04:213,12,0	1/1:16,15:32:12.04:231,12,0	1/1:10,17:26:9.50:174,10,0	0/1:23,0:22:32.42:32,0,130	0/1:7,14:21:17.18:165,0,17	1/1:20,0:18:12.04:182,12,0	0/1:24,0:24:9.58:167,0,10	1/1:21,0:17:9.01:138,9,0	0/1:13,0:13:21.50:238,0,22	1/1:7,6:14:6.02:104,6,0	1/1:14,14:27:9.03:173,9,0	1/1:13,12:25:12.04:230,12,0	0/1:14,13:26:0.13:497,0,0	0/0:21,0:21:24.08:0,24,314	1/1:17,3:19:6.02:115,6,0
chr10	18734679	.	CA	C	9312.61	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-1.416;DP=582;FS=21.468;HRun=3;HaplotypeScore=68.8499;InbreedingCoeff=0.9931;MQ=81.76;MQ0=0;MQRankSum=-2.910;QD=33.86;ReadPosRankSum=0.886;VQSLOD=2.9560;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,153,2149	0/0:7,0:7:18.06:0,18,258	0/0:11,0:11:10.75:0,11,317	0/0:21,0:21:56.62:0,57,658	0/0:25,0:25:72.15:0,72,953	1/1:0,18:18:51.16:631,51,0	1/1:0,24:24:72.23:891,72,0	1/1:1,26:27:69.17:815,69,0	1/1:0,19:19:54.17:668,54,0	0/0:28,0:28:84.26:0,84,1155	0/0:15,0:15:45.07:0,45,596	1/1:0,23:23:63.20:780,63,0	0/0:15,0:15:45.12:0,45,590	0/0:18,0:18:51.16:0,51,714	1/1:0,18:18:45.14:557,45,0	1/1:0,21:21:63.20:780,63,0	0/0:19,0:19:57.16:0,57,795	1/1:0,31:31:90.28:1114,90,0	1/1:0,17:17:42.13:520,42,0	1/1:1,14:15:36.11:446,36,0	1/1:1,25:26:72.23:891,72,0	1/1:0,16:16:42.13:515,42,0	0/0:16,0:16:48.16:0,48,686	0/0:31,0:31:93.30:0,93,1313	1/1:0,20:20:57.18:706,57,0	0/0:17,0:17:48.14:0,48,653	0/0:23,0:23:69.23:0,69,986	0/0:9,0:9:27.09:0,27,386
chr10	18734772	.	CT	C	2720.27	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-2.172;DP=529;FS=0.000;HRun=15;HaplotypeScore=83.5216;InbreedingCoeff=0.6663;MQ=72.05;MQ0=4;MQRankSum=-0.250;QD=5.45;ReadPosRankSum=4.151;VQSLOD=2.6361;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,0:45:51.59:149,52,0	1/1:5,6:11:10.92:75,11,0	0/0:15,0:10:6.46:0,6,67	0/0:12,2:11:0.81:0,1,15	1/1:9,13:22:16.52:156,17,0	1/1:7,0:25:32.51:93,33,0	1/1:7,0:22:26.44:76,26,0	1/1:1,0:14:17.39:51,17,0	1/1:3,0:17:29.91:87,30,0	1/1:9,9:18:26.48:173,26,0	1/1:7,15:23:36.64:235,37,0	1/1:5,0:15:21.05:64,21,0	1/1:5,12:18:28.58:179,29,0	1/1:6,7:14:14.65:96,15,0	1/1:9,0:19:24.40:69,24,0	1/1:1,0:17:26.47:75,26,0	1/1:6,14:23:34.77:207,35,0	1/1:3,0:17:27.01:80,27,0	1/1:8,0:28:35.93:104,36,0	1/1:7,0:14:15.47:44,15,0	1/1:9,0:17:8.97:26,9,0	1/1:6,0:13:16.28:47,16,0	1/1:5,8:13:8.73:58,9,0	1/1:8,14:22:29.51:192,30,0	1/1:4,0:16:21.58:61,22,0	1/1:8,8:17:18.78:114,19,0	1/1:8,18:28:42.31:259,42,0	1/1:2,5:7:8.85:58,9,0
chr10	18736798	.	ACT	A	5566.47	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=13.101;DP=567;FS=2.670;HRun=0;HaplotypeScore=68.1064;InbreedingCoeff=0.9979;MQ=75.99;MQ0=0;MQRankSum=-1.266;QD=38.39;ReadPosRankSum=2.378;VQSLOD=6.6215;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:93.28:0,93,1653	0/0:11,0:11:33.11:0,33,602	0/0:8,0:8:20.95:0,21,290	0/0:15,0:14:23.96:0,24,274	0/0:21,0:21:63.20:0,63,1147	1/1:2,12:14:36.12:530,36,0	1/1:2,26:28:72.24:1060,72,0	0/0:40,0:40:99:0,114,2003	0/0:21,0:21:63.22:0,63,1171	0/0:28,0:28:78.26:0,78,1424	0/0:19,0:19:57.20:0,57,1067	1/1:1,11:12:27.09:398,27,0	0/0:17,0:17:45.15:0,45,825	0/0:15,0:15:42.14:0,42,787	1/1:0,20:20:54.18:795,54,0	1/1:0,27:27:78.26:1149,78,0	0/0:35,0:35:99:0,102,1857	1/1:0,14:14:39.13:574,39,0	0/0:17,0:17:51.17:0,51,889	0/0:12,0:12:33.11:0,33,618	0/0:40,0:40:99:0,117,2179	1/1:0,13:13:36.12:530,36,0	0/0:13,0:13:39.12:0,39,688	0/0:14,0:14:42.14:0,42,786	1/1:1,16:17:36.12:530,36,0	0/0:26,0:26:75.24:0,75,1338	0/0:29,0:29:87.30:0,87,1558	0/0:7,0:7:21.07:0,21,393
chr10	18744157	.	C	CCCCGGAAGT	17778.51	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-1.314;DP=555;FS=2.901;HRun=0;HaplotypeScore=148.5318;InbreedingCoeff=0.9607;MQ=75.00;MQ0=0;MQRankSum=-11.159;QD=47.16;ReadPosRankSum=-5.060;VQSLOD=3.6973;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:37:30.10:765,30,0	1/1:3,6:9:18.95:821,19,0	0/0:22,0:22:17.51:0,18,310	0/0:27,0:27:14.19:0,14,395	1/1:12,9:23:33.03:1072,33,0	0/0:20,0:20:36.12:0,36,964	0/0:22,0:22:30.07:0,30,714	1/1:31,0:31:48.16:1765,48,0	1/1:9,8:17:27.09:1220,27,0	1/1:16,8:25:27.09:988,27,0	1/1:6,2:8:6.02:273,6,0	0/0:12,0:12:27.08:0,27,659	1/1:9,8:18:36.12:1532,36,0	1/1:17,12:29:45.15:1896,45,0	0/0:15,0:15:36.12:0,36,998	0/0:17,0:17:33.10:0,33,835	1/1:20,4:25:27.09:1070,27,0	0/0:22,0:22:45.09:0,45,1082	1/1:16,5:22:21.05:810,21,0	1/1:9,5:17:24.03:629,24,0	1/1:18,4:24:12.04:520,12,0	0/0:9,0:9:18.06:0,18,499	1/1:7,6:13:24.08:864,24,0	1/1:10,8:20:21.96:840,22,0	0/0:12,0:12:21.07:0,21,582	1/1:16,12:28:45.12:1653,45,0	1/1:13,7:20:18.06:648,18,0	1/1:6,3:10:9.03:411,9,0
chr10	18745352	.	A	ACC	2580.92	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-7.647;DP=730;FS=10.908;HRun=7;HaplotypeScore=86.1320;InbreedingCoeff=0.9988;MQ=90.55;MQ0=0;MQRankSum=-1.855;QD=30.01;ReadPosRankSum=-3.741;VQSLOD=1.8505;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:72.20:0,72,839	0/0:15,0:15:39.11:0,39,454	0/0:32,0:32:72.18:0,72,818	0/0:24,0:24:59.94:0,60,646	0/0:25,0:25:72.20:0,72,827	0/0:24,0:24:63.18:0,63,734	0/0:28,0:28:78.22:0,78,898	1/1:6,14:22:47.07:637,47,0	0/0:22,0:22:60.17:0,60,699	0/0:32,0:32:84.23:0,84,969	0/0:21,0:21:51.13:0,51,593	0/0:33,0:33:90.24:0,90,1038	0/0:29,0:29:81.23:0,81,937	0/0:27,0:27:81.22:0,81,931	0/0:41,0:41:99:0,111,1280	0/0:29,0:29:87.26:0,87,1013	0/0:30,0:30:84.25:0,84,979	0/0:25,0:25:66.18:0,66,769	1/1:6,14:23:49.80:694,50,0	1/1:2,13:16:39.13:622,39,0	1/1:4,21:25:48.16:788,48,0	0/0:30,0:31:68.91:0,69,780	0/0:21,0:21:57.15:0,57,653	0/0:33,0:33:84.24:0,84,979	0/0:28,0:28:78.22:0,78,908	0/0:36,0:36:90.23:0,90,1031	0/0:15,0:15:42.12:0,42,489	0/0:8,0:8:21.06:0,21,245
chr10	18746289	.	AT	A	4394.31	PASS	AB=0.995;AC=23;AF=0.411;AN=56;BaseQRankSum=-16.385;DP=599;FS=0.000;HRun=8;HaplotypeScore=85.5383;InbreedingCoeff=0.4395;MQ=72.51;MQ0=1;MQRankSum=-1.697;QD=13.65;ReadPosRankSum=0.253;VQSLOD=4.5828;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:26.26:0,26,237	0/0:11,0:11:25.78:0,26,100	0/0:16,0:14:22.20:0,22,194	0/0:6,0:6:8.75:0,9,50	0/0:35,0:35:0.14:0,0,211	1/1:2,23:25:63.10:608,63,0	1/1:1,15:16:36.06:347,36,0	0/0:30,0:30:5.83:0,6,134	0/0:15,0:15:42.10:0,42,476	0/1:25,0:25:42.91:43,0,91	0/1:23,0:23:42.17:42,0,109	1/1:1,20:21:48.08:463,48,0	0/0:22,0:22:11.21:0,11,165	0/1:18,0:18:10.41:10,0,94	1/1:1,17:18:48.08:463,48,0	1/1:1,21:22:63.10:608,63,0	0/0:29,0:29:19.49:0,19,185	1/1:4,23:27:60.09:579,60,0	0/1:22,0:22:23.54:24,0,93	0/0:24,0:24:10.93:0,11,156	0/1:14,0:14:15.40:15,0,71	1/1:1,25:26:71.90:669,72,0	0/1:29,1:30:24.48:24,0,165	0/0:16,0:16:14.86:0,15,122	1/1:1,23:24:51.08:492,51,0	0/0:30,0:30:28.97:0,29,196	0/0:14,0:14:34.72:0,35,161	0/1:11,0:11:4.99:5,0,66
chr10	18746944	.	TATA	T	1177.36	PASS	AB=0.800;AC=27;AF=0.711;AN=38;BaseQRankSum=4.833;DP=227;FS=0.000;HRun=0;HaplotypeScore=41.0525;InbreedingCoeff=0.5173;MQ=70.41;MQ0=2;MQRankSum=-1.902;QD=9.98;ReadPosRankSum=0.858;VQSLOD=2.3751;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:6:2.98:21,3,0	1/1:1,2:3:6.02:78,6,0	./.	0/0:4,0:4:0.47:0,0,1	1/1:4,4:8:9.03:118,9,0	1/1:11,0:19:14.88:105,15,0	1/1:3,0:4:2.96:19,3,0	0/0:29,0:28:3.01:0,3,44	1/1:5,0:8:8.93:63,9,0	./.	1/1:5,0:6:5.99:60,6,0	1/1:0,0:1:2.98:21,3,0	0/1:6,2:8:48.22:69,0,48	0/0:5,0:5:12.04:0,12,229	./.	./.	0/0:21,0:21:33.10:0,33,597	1/1:6,0:8:5.95:42,6,0	0/0:10,0:14:12.04:0,12,159	./.	./.	./.	./.	./.	1/1:2,0:8:11.90:84,12,0	1/1:3,3:6:9.01:101,9,0	1/1:7,5:12:9.03:118,9,0	1/1:5,15:21:33.07:413,33,0
chr10	18747784	.	C	CTT	27631.24	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=-16.427;DP=741;FS=2.631;HRun=1;HaplotypeScore=74.2416;InbreedingCoeff=0.9988;MQ=80.45;MQ0=1;MQRankSum=-3.608;QD=50.61;ReadPosRankSum=5.515;VQSLOD=4.8682;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,56:58:99:2837,148,0	1/1:0,8:8:21.07:406,21,0	0/0:29,0:28:67.97:0,68,1122	0/0:18,0:17:51.17:0,51,779	1/1:0,25:25:75.26:1449,75,0	1/1:1,21:21:57.15:1063,57,0	1/1:0,22:22:66.23:1275,66,0	0/0:36,0:36:99:0,105,1493	0/0:26,1:27:23.32:0,23,1134	1/1:3,29:32:93.22:1672,93,0	1/1:0,20:20:57.11:1025,57,0	1/1:0,23:24:66.23:1275,66,0	1/1:2,30:32:90.24:1651,90,0	1/1:1,17:18:45.15:869,45,0	1/1:1,31:32:78.27:1507,78,0	1/1:0,35:35:90.31:1739,90,0	1/1:0,32:32:78.22:1469,78,0	1/1:0,29:30:69.24:1302,69,0	0/0:23,0:23:69.20:0,69,995	0/0:25,0:25:72.23:0,72,1078	0/0:37,0:37:99:0,111,1650	1/1:0,20:21:57.15:1062,57,0	1/1:1,15:16:39.13:754,39,0	1/1:1,27:28:69.21:1297,69,0	1/1:0,22:22:60.21:1159,60,0	1/1:1,31:32:93.30:1736,93,0	1/1:1,18:19:54.19:1042,54,0	1/1:0,18:18:54.19:1043,54,0
chr10	18747928	.	TG	T	8171.15	PASS	AB=1.000;AC=33;AF=0.589;AN=56;BaseQRankSum=4.596;DP=545;FS=8.738;HRun=7;HaplotypeScore=94.5138;InbreedingCoeff=0.9446;MQ=63.98;MQ0=1;MQRankSum=-4.264;QD=24.91;ReadPosRankSum=-0.527;VQSLOD=4.5089;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:60.17:0,60,729	1/1:3,9:12:30.06:305,30,0	0/1:8,0:7:0.87:1,0,55	0/0:7,0:6:5.98:0,6,55	1/1:5,23:28:72.16:734,72,0	0/0:15,0:15:42.12:0,42,514	0/0:21,0:21:60.17:0,60,739	1/1:3,15:18:39.08:398,39,0	0/0:20,0:20:54.17:0,54,675	1/1:8,20:28:57.12:582,57,0	1/1:3,13:16:42.07:420,42,0	0/0:24,0:24:66.21:0,66,828	1/1:1,16:17:51.10:513,51,0	1/1:3,23:26:69.15:703,69,0	0/0:18,0:18:51.16:0,51,630	0/0:26,0:26:75.20:0,75,896	1/1:4,19:22:54.12:551,54,0	0/0:26,0:26:72.23:0,72,905	1/1:1,19:20:54.11:544,54,0	1/1:2,14:16:36.08:367,36,0	1/1:1,30:31:81.18:826,81,0	0/0:20,0:20:51.16:0,51,641	1/1:4,13:17:39.09:397,39,0	1/1:4,11:15:33.01:318,33,0	0/0:17,0:17:45.13:0,45,543	1/1:4,18:22:57.12:576,57,0	1/1:3,14:17:51.08:506,51,0	1/1:0,14:14:42.10:428,42,0
chr10	18747970	.	G	GC	8304.73	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=1.290;DP=575;FS=5.559;HRun=6;HaplotypeScore=113.2301;InbreedingCoeff=0.9992;MQ=86.54;MQ0=1;MQRankSum=-6.783;QD=32.19;ReadPosRankSum=2.292;VQSLOD=3.8604;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,15:18:45.14:566,45,0	1/1:1,8:10:27.09:339,27,0	0/0:29,0:28:63.02:0,63,604	0/0:26,0:26:51.04:0,51,487	1/1:8,15:23:48.15:601,48,0	0/0:14,0:14:39.09:0,39,397	0/0:25,0:25:72.16:0,72,734	0/0:24,0:24:60.13:0,60,612	0/0:23,0:23:66.12:0,66,663	1/1:2,19:21:57.15:689,57,0	1/1:2,19:21:57.18:710,57,0	0/0:19,0:19:54.12:0,54,551	1/1:0,27:27:78.25:981,78,0	1/1:1,22:23:66.21:830,66,0	0/0:13,0:13:39.09:0,39,397	0/0:15,0:15:42.08:0,42,423	1/1:3,23:25:69.10:812,69,0	0/0:26,0:26:69.11:0,69,693	0/0:14,0:14:33.07:0,33,337	0/0:18,0:18:45.10:0,45,459	0/0:30,0:30:75.15:0,75,757	0/0:20,0:20:57.12:0,57,580	1/1:3,17:20:48.15:603,48,0	1/1:5,21:26:60:742,60,0	0/0:21,0:21:54.11:0,54,550	1/1:4,18:22:54.17:678,54,0	1/1:1,13:14:39.12:490,39,0	1/1:0,7:7:21.07:264,21,0
chr10	18749652	.	CGG	C	1240.19	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=9.713;DP=649;FS=8.020;HRun=2;HaplotypeScore=123.2282;InbreedingCoeff=0.9865;MQ=87.64;MQ0=0;MQRankSum=-9.785;QD=26.39;ReadPosRankSum=-1.284;VQSLOD=1.8723;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,144,2871	0/0:4,0:4:12.04:0,12,244	0/0:21,0:21:62.84:0,63,1140	0/0:25,0:25:66.23:0,66,1326	0/0:18,0:18:51.17:0,51,1035	0/0:26,0:26:75.26:0,75,1519	0/0:32,0:32:96.33:0,96,1945	1/1:1,12:13:39.09:417,39,0	0/0:21,0:21:63.21:0,63,1236	0/0:17,0:17:48.16:0,48,957	0/0:15,0:15:45.15:0,45,889	0/0:31,0:31:90.28:0,90,1757	0/0:30,0:30:90.31:0,90,1802	0/0:39,0:39:99:0,114,2253	0/0:29,0:29:87.30:0,87,1766	0/0:27,0:27:81.28:0,81,1643	0/0:41,0:41:99:0,123,2422	0/0:32,0:32:96.33:0,96,1946	1/1:0,13:13:36.09:395,36,0	1/1:1,8:9:27.03:274,27,0	1/1:2,10:12:27.53:315,28,0	0/0:21,0:21:60.21:0,60,1210	0/0:13,0:13:39.13:0,39,768	0/0:28,0:28:84.29:0,84,1685	0/0:27,0:27:81.28:0,81,1599	0/0:30,0:30:90.31:0,90,1815	0/0:21,0:21:63.22:0,63,1256	0/0:5,0:5:15.05:0,15,305
chr10	18749655	.	CTGCACCTCT	C	2569.94	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=10.371;DP=640;FS=8.671;HRun=0;HaplotypeScore=210.9835;InbreedingCoeff=0.9860;MQ=89.09;MQ0=0;MQRankSum=-9.744;QD=58.41;ReadPosRankSum=-0.578;VQSLOD=1.9144;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,138,5710	0/0:4,0:4:12.04:0,12,596	0/0:22,0:22:66.23:0,66,2666	0/0:26,0:26:75.21:0,75,2786	0/0:18,0:18:51.16:0,51,2156	0/0:23,0:23:69.22:0,69,3101	0/0:32,0:32:96.32:0,96,4313	1/1:0,12:12:36.12:919,36,0	0/0:22,0:22:63.19:0,63,2790	0/0:17,0:17:42.14:0,42,1871	0/0:14,0:14:36.10:0,36,1413	0/0:33,0:33:99:0,99,4863	0/0:29,0:29:87.30:0,87,4015	0/0:37,0:37:99:0,111,5230	0/0:30,0:30:90.31:0,90,4357	0/0:27,0:27:78.27:0,78,3540	0/0:37,0:37:99:0,108,4818	0/0:32,0:32:93.32:0,93,4365	1/1:2,10:12:30.10:768,30,0	1/1:1,8:9:27.07:578,27,0	1/1:1,10:11:23.86:465,24,0	0/0:22,0:22:66.23:0,66,2756	0/0:14,0:14:38.98:0,39,1626	0/0:27,0:27:81.24:0,81,3582	0/0:25,0:25:69.15:0,69,2510	0/0:30,0:30:84.25:0,84,3343	0/0:21,0:21:63.22:0,63,2847	0/0:5,0:5:15.05:0,15,744
chr10	18753039	.	A	AT	18087.68	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-4.934;DP=675;FS=1.815;HRun=8;HaplotypeScore=79.2245;InbreedingCoeff=0.9860;MQ=76.97;MQ0=1;MQRankSum=-7.579;QD=28.17;ReadPosRankSum=3.786;VQSLOD=5.0020;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,39:41:99:1212,105,0	1/1:1,10:11:27.08:312,27,0	0/0:18,0:18:44.90:0,45,388	0/0:15,0:15:12.99:0,13,134	1/1:2,27:29:78.19:884,78,0	1/1:2,23:26:72.17:816,72,0	1/1:3,15:20:47.93:519,48,0	1/1:11,22:33:66.20:762,66,0	1/1:3,16:19:39.12:450,39,0	1/1:7,25:32:78.23:898,78,0	1/1:2,16:18:42.12:483,42,0	1/1:2,20:22:60.12:668,60,0	1/1:1,20:21:56.97:658,57,0	1/1:3,22:25:60.18:692,60,0	1/1:3,28:31:69.21:796,69,0	1/1:2,25:28:72.05:811,72,0	1/1:3,25:28:75.22:862,75,0	1/1:2,17:18:42.12:485,42,0	1/1:7,19:26:60.18:690,60,0	1/1:2,11:13:30.09:344,30,0	1/1:3,38:41:99:1177,102,0	1/1:1,24:26:60.01:670,60,0	1/1:0,11:12:32.93:361,33,0	1/1:2,21:23:54.16:623,54,0	1/1:0,24:24:69.07:796,69,0	1/1:3,27:30:53.77:872,54,0	1/1:3,25:27:66.20:762,66,0	1/1:1,15:16:42.12:485,42,0
chr10	18753345	.	TCACACACACACA	T	612.48	PASS	AB=0.983;AC=10;AF=0.192;AN=52;BaseQRankSum=2.040;DP=505;FS=2.491;HRun=0;HaplotypeScore=166.9640;InbreedingCoeff=0.5830;MQ=64.49;MQ0=18;MQRankSum=-0.760;QD=4.50;ReadPosRankSum=0.795;VQSLOD=2.9190;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:41,0:38:14.79:232,15,0	0/0:10,0:9:3:0,3,25	./.	./.	0/0:10,0:10:15.05:0,15,556	0/0:10,0:9:11.62:0,12,145	0/1:27,0:27:4.22:4,0,560	0/0:22,0:22:6.82:0,7,50	1/1:13,3:16:6.02:197,6,0	0/0:17,0:17:17.56:0,18,526	0/0:7,0:7:9.03:0,9,248	0/0:16,0:15:18.04:0,18,419	0/0:15,0:15:30.10:0,30,1079	0/0:12,0:11:15.05:0,15,490	0/0:18,0:17:23.82:0,24,481	1/1:9,9:18:8.96:152,9,0	0/0:25,0:24:33.10:0,33,1220	1/1:22,0:20:9.01:144,9,0	0/1:10,0:10:7.20:28,0,7	0/0:5,0:11:3:0,3,30	0/0:13,0:13:7.73:0,8,148	0/0:10,0:8:6.02:0,6,96	0/0:13,0:13:15.05:0,15,397	0/0:29,0:29:48.15:0,48,1986	0/0:18,0:16:22.59:0,23,338	0/0:25,0:25:36.07:0,36,1359	0/0:29,0:29:33.11:0,33,1458	0/0:10,0:7:9.03:0,9,452
chr10	18754150	.	CCTCTCTCTCTCTCTCT	C	1329.29	PASS	AB=0.842;AC=18;AF=0.450;AN=40;BaseQRankSum=2.763;DP=475;FS=6.227;HRun=0;HaplotypeScore=201.4252;InbreedingCoeff=0.4481;MQ=59.65;MQ0=23;MQRankSum=-2.353;QD=8.31;ReadPosRankSum=0.248;VQSLOD=2.2371;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:24:3.95:0,4,107	1/1:8,0:7:9.03:221,9,0	0/0:18,0:14:3.01:0,3,44	0/0:19,0:11:6.02:0,6,119	./.	1/1:10,13:24:18.06:638,18,0	1/1:19,1:19:3.01:128,3,0	0/0:39,0:35:3.01:0,3,40	0/0:16,0:16:9.03:0,9,296	0/0:12,0:9:0:0,0,0	0/1:7,0:6:0:0,0,0	0/1:14,12:26:18.95:101,0,19	0/0:11,0:11:2.04:0,2,6	./.	1/1:12,5:20:6.02:220,6,0	1/1:14,0:14:3.01:30,3,0	./.	1/1:8,0:8:2.98:22,3,0	0/0:19,0:15:15.05:0,15,469	0/0:19,0:18:15.04:0,15,517	0/0:32,0:31:0.47:0,0,1	./.	./.	./.	./.	1/1:17,0:15:5.93:64,6,0	1/1:16,0:14:3.01:35,3,0	./.
chr10	18754225	.	GTCTC	G	109.62	PASS	AB=0.968;AC=12;AF=0.261;AN=46;BaseQRankSum=7.538;DP=480;FS=32.727;HRun=0;HaplotypeScore=120.1775;InbreedingCoeff=-0.1181;MQ=39.43;MQ0=37;MQRankSum=-7.478;QD=0.62;ReadPosRankSum=-0.310;VQSLOD=0.1090;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,1:14:0:0,0,0	0/0:2,0:2:0:0,0,0	0/0:28,0:6:13.26:0,13,358	0/1:45,0:9:7.25:7,0,171	./.	0/0:25,0:24:30.03:0,30,700	0/0:40,0:38:87.24:0,87,1935	0/1:17,5:10:69.40:69,0,136	0/1:14,0:13:38.80:39,0,51	0/1:14,1:12:39.42:39,0,206	./.	0/0:33,0:33:60.17:0,60,1419	0/1:21,0:20:0.38:0,0,23	0/0:9,0:9:0.89:0,1,2	0/0:37,0:37:78.27:0,78,2032	0/1:9,0:9:17.83:18,0,54	0/1:9,0:9:1.04:1,0,159	1/1:2,0:2:1.55:4,2,0	0/1:12,1:4:30.08:30,0,123	./.	./.	0/0:23,0:23:51.18:0,51,1287	0/0:7,0:7:3.01:0,3,54	./.	0/0:21,0:20:42.14:0,42,986	0/1:13,0:9:12.53:13,0,346	0/0:11,0:11:5.03:0,5,286	0/1:14,0:11:4.94:5,0,77
chr10	18754229	.	C	CTG	968.10	PASS	AB=0.889;AC=16;AF=0.348;AN=46;BaseQRankSum=7.794;DP=468;FS=22.163;HRun=0;HaplotypeScore=111.4190;InbreedingCoeff=-0.1519;MQ=40.13;MQ0=29;MQRankSum=-7.680;QD=4.96;ReadPosRankSum=0.538;VQSLOD=1.4272;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:13:0.47:0,0,1	0/1:3,0:3:0:0,0,0	0/0:24,0:6:13.23:0,13,226	0/1:36,0:9:15.02:15,0,84	./.	0/0:23,0:22:30.03:0,30,431	0/0:42,0:40:93.07:0,93,1295	0/1:24,1:13:99:120,0,122	0/1:12,1:12:26.18:60,0,26	0/1:10,5:13:99:302,0,131	./.	0/0:31,0:32:60.17:0,60,873	0/1:10,10:20:8.06:150,0,8	1/1:4,5:9:3.01:45,3,0	0/0:36,0:36:81.23:0,81,1213	0/1:9,0:9:7.97:8,0,44	0/1:8,1:9:94.69:95,0,101	1/1:3,0:3:2.99:24,3,0	0/1:14,0:5:3.45:3,0,94	./.	./.	0/0:24,0:24:51.17:0,51,779	0/0:7,0:7:3.01:0,3,41	./.	0/0:21,0:20:42.14:0,42,640	0/1:11,1:9:55.42:55,0,226	0/1:10,2:12:90.48:90,0,182	0/1:8,5:11:33.60:133,0,34
chr10	18754245	.	CTG	C	130.16	PASS	AB=0.942;AC=10;AF=0.217;AN=46;BaseQRankSum=5.396;DP=424;FS=5.534;HRun=0;HaplotypeScore=105.2245;InbreedingCoeff=-0.1829;MQ=40.03;MQ0=21;MQRankSum=-4.906;QD=1.00;ReadPosRankSum=0.209;VQSLOD=1.7421;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:12:3.46:0,3,25	0/0:3,1:4:2.85:0,3,57	0/0:6,0:3:8.94:0,9,84	0/1:9,0:5:24.04:24,0,47	./.	0/0:19,0:18:27.09:0,27,499	0/0:37,0:35:84.19:0,84,1452	0/1:35,0:22:4.32:4,0,503	0/1:12,0:12:18.21:18,0,107	0/1:14,2:14:51.48:51,0,492	./.	0/0:33,0:33:68.92:0,69,1274	0/0:15,3:17:4.09:0,4,62	0/0:5,2:7:3.01:0,3,47	0/0:37,0:37:87.28:0,87,1644	0/0:7,1:8:6.02:0,6,86	0/1:8,1:9:2.64:3,0,139	1/1:2,0:2:1.25:3,1,0	0/1:21,1:10:75.78:76,0,233	./.	./.	0/0:20,0:20:45.15:0,45,859	0/0:8,1:9:3.01:0,3,58	./.	0/0:23,0:21:54.16:0,54,971	0/1:12,2:11:57.17:57,0,316	0/0:12,0:12:29.29:0,29,417	0/1:10,1:9:10.81:11,0,157
chr10	18754247	.	G	GTC	111.43	PASS	AB=0.995;AC=10;AF=0.227;AN=44;BaseQRankSum=6.264;DP=421;FS=6.592;HRun=0;HaplotypeScore=105.2784;InbreedingCoeff=-0.1232;MQ=39.92;MQ0=20;MQRankSum=-5.009;QD=0.79;ReadPosRankSum=-1.610;VQSLOD=1.3675;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:12:3.47:0,3,30	0/0:4,0:4:3.01:0,3,41	./.	0/1:8,0:5:0:0,0,0	./.	0/0:18,0:17:27.09:0,27,369	0/0:37,0:35:72.06:0,72,985	0/1:36,0:22:21.36:21,0,480	0/1:12,0:12:2.62:3,0,109	0/1:17,0:15:14.26:14,0,343	./.	0/0:33,0:33:66.22:0,66,905	0/1:18,0:17:24.84:25,0,31	0/0:7,0:7:3.01:0,3,38	0/0:37,0:37:84.27:0,84,1137	0/0:8,0:8:6.02:0,6,77	0/0:9,0:9:10.52:0,11,112	1/1:2,0:2:1.25:3,1,0	0/1:22,1:10:99:100,0,106	./.	./.	0/0:20,0:20:42.13:0,42,560	0/0:7,1:8:3.01:0,3,41	./.	0/0:23,0:21:54.13:0,54,690	0/1:14,0:11:17.52:18,0,230	0/0:11,0:12:6.20:0,6,261	0/1:11,0:9:40.73:41,0,84
chr10	18754263	.	GTC	G	472.33	PASS	AB=0.903;AC=9;AF=0.225;AN=40;BaseQRankSum=6.444;DP=405;FS=22.407;HRun=0;HaplotypeScore=113.0858;InbreedingCoeff=-0.1162;MQ=39.76;MQ0=23;MQRankSum=-5.721;QD=3.63;ReadPosRankSum=0.252;VQSLOD=1.1510;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:18,2:18:3.47:0,3,26	0/0:2,1:3:3.01:0,3,55	./.	./.	./.	0/0:28,0:25:42.13:0,42,734	0/0:41,0:39:83.90:0,84,1409	0/1:30,7:27:99:263,0,424	0/1:10,0:10:14.54:15,0,84	0/1:12,3:13:95.45:95,0,265	./.	0/0:34,0:34:78.27:0,78,1374	0/0:10,3:12:6.02:0,6,91	0/0:5,1:6:3.01:0,3,36	0/0:30,0:31:72.23:0,72,1263	0/1:10,0:9:3.10:3,0,60	0/1:8,1:9:16.04:16,0,82	./.	0/1:22,2:11:77.21:77,0,224	./.	./.	0/0:16,0:16:30.10:0,30,532	0/0:7,1:8:3.01:0,3,55	./.	0/0:20,0:18:48.13:0,48,800	0/1:11,3:10:61.78:62,0,130	0/0:9,0:9:21.06:0,21,337	1/1:10,1:9:5.95:61,6,0
chr10	18754269	.	G	GTC	694.04	PASS	AB=0.982;AC=9;AF=0.225;AN=40;BaseQRankSum=5.361;DP=397;FS=16.179;HRun=0;HaplotypeScore=117.4773;InbreedingCoeff=0.0008;MQ=39.64;MQ0=21;MQRankSum=-5.411;QD=5.83;ReadPosRankSum=1.027;VQSLOD=1.9656;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:18:0.47:0,0,1	0/0:4,0:4:5.75:0,6,53	./.	./.	./.	0/0:30,0:27:45.08:0,45,616	0/0:44,0:42:80.99:0,81,1060	0/1:32,3:26:99:304,0,250	1/1:10,0:10:12.04:200,12,0	0/1:13,0:11:51.69:52,0,215	./.	0/0:35,0:35:69.22:0,69,930	0/0:13,0:12:7.45:0,7,85	0/0:8,0:8:2.74:0,3,12	0/0:32,0:32:69.21:0,69,927	0/0:10,0:9:2.68:0,3,11	0/1:8,0:8:36.32:36,0,69	./.	0/1:19,1:11:90.06:90,0,128	./.	./.	0/0:15,0:15:26.28:0,26,318	0/0:8,0:8:3.01:0,3,41	./.	0/0:18,0:16:39.13:0,39,536	0/1:15,0:11:87.09:87,0,140	0/1:8,0:8:16.58:17,0,188	0/1:10,0:8:1.32:32,0,1
chr10	18754271	.	CTCTG	C	717.92	PASS	AB=0.977;AC=16;AF=0.400;AN=40;BaseQRankSum=6.564;DP=402;FS=19.109;HRun=0;HaplotypeScore=127.0341;InbreedingCoeff=-0.0591;MQ=39.60;MQ0=23;MQRankSum=-5.825;QD=4.40;ReadPosRankSum=-0.203;VQSLOD=1.1302;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:17,3:18:2.86:17,3,0	0/1:4,0:4:16.77:17,0,47	./.	./.	./.	0/0:31,0:28:50.53:0,51,1103	0/0:45,0:43:89.55:0,90,1845	0/1:33,3:27:99:216,0,302	1/1:5,5:10:2.07:172,2,0	0/1:11,0:10:58.60:59,0,292	./.	0/0:36,0:36:75.16:0,75,1726	0/1:12,0:11:5.77:6,0,109	1/1:7,0:7:2.99:23,3,0	0/0:32,0:32:69.22:0,69,1546	1/1:7,3:9:2.99:23,3,0	0/1:8,0:8:36.43:36,0,103	./.	0/1:19,1:11:99:148,0,141	./.	./.	0/0:16,0:16:30.08:0,30,615	0/0:9,0:8:3.01:0,3,65	./.	0/0:20,0:18:42.14:0,42,1071	0/1:14,1:11:98.73:99,0,221	0/0:9,0:9:0.09:0,0,337	0/1:10,0:8:20.30:33,0,20
chr10	18754281	.	GTCTC	G	34.33	PASS	AB=0.985;AC=10;AF=0.250;AN=40;BaseQRankSum=4.885;DP=380;FS=12.867;HRun=0;HaplotypeScore=118.1325;InbreedingCoeff=0.2544;MQ=40.35;MQ0=20;MQRankSum=-4.394;QD=0.54;ReadPosRankSum=0.319;VQSLOD=1.8523;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:17:0.47:0,0,1	1/1:3,0:3:3.46:24,3,0	./.	./.	./.	0/0:33,0:30:47.92:0,48,906	0/0:47,2:48:98.57:0,99,1797	0/0:30,0:21:38.22:0,38,429	0/1:6,0:6:9.51:10,0,23	0/0:12,0:11:6.80:0,7,191	./.	0/0:35,0:35:75.23:0,75,1622	0/1:10,0:9:5.75:6,0,31	1/1:6,0:6:2.99:23,3,0	0/0:36,1:36:69.14:0,69,1341	1/1:8,0:7:2.99:23,3,0	0/0:6,0:6:3.39:0,3,25	./.	0/1:15,1:9:29.44:29,0,178	./.	./.	0/0:16,0:16:33.11:0,33,608	0/0:7,0:6:0:0,0,0	./.	0/0:21,0:20:45.14:0,45,990	0/1:15,0:10:37.64:38,0,120	0/0:8,0:8:15.29:0,15,110	0/0:7,0:5:5.54:0,6,25
chr10	18754301	.	C	CTG	496.52	PASS	AB=0.864;AC=18;AF=0.474;AN=38;BaseQRankSum=5.898;DP=308;FS=3.519;HRun=0;HaplotypeScore=77.3694;InbreedingCoeff=0.2536;MQ=41.35;MQ0=16;MQRankSum=-6.270;QD=7.64;ReadPosRankSum=-0.050;VQSLOD=3.0733;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	1/1:0,1:1:3.01:40,3,0	./.	./.	./.	0/0:47,0:42:72.16:0,72,1076	0/0:47,0:46:83.50:0,83,1164	0/1:14,0:5:24.96:25,0,78	1/1:0,1:1:3.01:58,3,0	0/1:6,2:8:88.18:99,0,88	./.	0/0:31,0:31:69.23:0,69,1052	1/1:3,2:4:3:28,3,0	0/0:1,4:5:1.25:0,1,3	0/0:40,0:38:60.19:0,60,897	1/1:2,1:2:2.92:17,3,0	0/0:1,0:1:2.99:0,3,23	./.	0/1:11,3:7:71.73:113,0,72	1/1:4,1:4:2.94:18,3,0	./.	0/0:15,0:15:27.07:0,27,389	./.	./.	0/0:19,0:18:36.11:0,36,529	0/1:8,2:7:59.88:117,0,60	1/1:1,2:3:3.01:57,3,0	1/1:0,1:1:3.01:58,3,0
chr10	18754319	.	C	CTG	358.65	PASS	AB=0.777;AC=11;AF=0.275;AN=40;BaseQRankSum=4.248;DP=342;FS=1.210;HRun=0;HaplotypeScore=101.5888;InbreedingCoeff=0.1984;MQ=40.40;MQ0=15;MQRankSum=-5.191;QD=6.52;ReadPosRankSum=1.820;VQSLOD=3.4210;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	0/0:6,1:7:6.02:0,6,79	0/0:7,0:1:3.01:0,3,46	./.	./.	0/0:53,0:47:86.86:0,87,1284	0/0:47,0:44:74.69:0,75,1140	0/0:9,0:2:6.02:0,6,73	0/1:1,1:2:9.61:47,0,10	0/1:7,2:9:99:100,0,164	./.	0/0:29,0:29:66.05:0,66,907	0/0:6,2:8:11.82:0,12,116	0/0:7,3:10:5.75:0,6,50	0/0:37,0:36:51.62:0,52,737	0/0:4,1:4:2.74:0,3,12	./.	./.	0/1:11,2:7:60.85:75,0,61	1/1:5,3:8:3:54,3,0	0/1:8,3:8:0:0,0,0	0/0:14,0:13:24.08:0,24,367	./.	./.	0/0:20,0:19:39.12:0,39,575	0/1:4,2:4:54.98:96,0,55	1/1:2,2:2:3.01:53,3,0	1/1:1,1:2:3.01:53,3,0
chr10	18754347	.	GTCTGTC	G	870.87	PASS	AB=0.765;AC=17;AF=0.567;AN=30;BaseQRankSum=4.979;DP=331;FS=7.152;HRun=0;HaplotypeScore=105.2262;InbreedingCoeff=0.5692;MQ=37.29;MQ0=20;MQRankSum=-6.301;QD=9.57;ReadPosRankSum=-0.733;VQSLOD=1.7844;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	1/1:1,6:7:7.71:102,8,0	./.	./.	./.	0/0:41,0:38:57.17:0,57,1306	0/0:34,0:30:30.08:0,30,818	1/1:16,0:9:3.01:40,3,0	1/1:3,1:4:3.01:63,3,0	0/1:9,4:11:22.79:175,0,23	./.	0/0:24,0:24:36.05:0,36,833	1/1:2,6:8:12.04:181,12,0	1/1:4,6:10:3.01:35,3,0	0/0:30,0:29:29.61:0,30,637	./.	./.	./.	1/1:10,1:8:1.36:61,1,0	1/1:6,4:10:5.78:96,6,0	./.	0/0:10,0:6:3.01:0,3,90	./.	./.	0/0:17,0:17:23.99:0,24,545	1/1:9,2:7:12.04:248,12,0	./.	./.
chr10	18754385	.	CTG	C	120.68	PASS	AB=0.944;AC=11;AF=0.306;AN=36;BaseQRankSum=3.590;DP=224;FS=1.242;HRun=0;HaplotypeScore=63.1273;InbreedingCoeff=0.3409;MQ=32.07;MQ0=35;MQRankSum=-1.626;QD=2.23;ReadPosRankSum=-0.099;VQSLOD=1.4765;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:6,0:6:1.14:0,1,3	./.	./.	./.	0/1:18,0:17:40.21:40,0,463	0/0:23,0:18:20.54:0,21,337	0/0:19,0:3:9.03:0,9,149	1/1:1,1:2:3:27,3,0	1/1:11,0:5:6.27:41,6,0	0/0:9,2:6:0:0,0,0	0/0:13,0:13:27.06:0,27,434	0/0:6,0:6:1.82:0,2,5	0/0:7,0:7:0:0,0,0	0/0:14,0:12:5.58:0,6,115	./.	0/1:4,0:3:0:0,0,0	1/1:2,0:1:2.97:20,3,0	0/0:11,0:5:13.58:0,14,73	1/1:7,0:6:2.92:33,3,0	./.	0/0:8,0:3:2.89:0,3,26	./.	./.	0/0:10,0:10:14.94:0,15,245	0/1:8,2:5:46.90:70,0,47	./.	./.
chr10	18754405	.	G	GTC	441.50	PASS	AB=0.964;AC=10;AF=0.294;AN=34;BaseQRankSum=-3.038;DP=177;FS=1.569;HRun=0;HaplotypeScore=55.2794;InbreedingCoeff=0.3158;MQ=27.23;MQ0=35;MQRankSum=2.436;QD=5.26;ReadPosRankSum=1.451;VQSLOD=2.0285;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	./.	1/1:10,2:12:11.66:167,12,0	0/1:13,2:12:0:0,0,0	0/0:19,0:3:5.99:0,6,58	./.	0/0:8,0:4:0.05:0,0,20	0/0:9,0:4:0.47:0,0,1	1/1:7,6:13:20.77:348,21,0	./.	0/1:5,0:4:0:0,0,0	0/1:8,1:8:0:0,0,0	0/1:6,0:5:0:0,0,0	0/0:5,0:4:0:0,0,0	0/0:3,0:2:5.93:0,6,40	0/1:11,0:5:19.80:20,0,30	0/0:6,0:5:1.86:0,2,6	0/1:13,0:5:0:0,0,0	./.	./.	./.	0/0:4,0:4:3.01:0,3,39	0/0:8,0:3:3.01:0,3,39	0/0:2,0:1:3.01:0,3,32	./.
chr10	18754443	.	GTC	G	415.73	PASS	AB=0.789;AC=16;AF=0.320;AN=50;BaseQRankSum=1.718;DP=179;FS=53.389;HRun=0;HaplotypeScore=60.6285;InbreedingCoeff=0.1156;MQ=30.98;MQ0=15;MQRankSum=-2.158;QD=6.30;ReadPosRankSum=0.152;VQSLOD=0.8260;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:2,0:2:0:0,0,0	0/1:2,1:3:13.13:37,0,13	./.	./.	0/0:4,2:4:0:0,0,0	0/0:14,0:14:15.17:0,15,206	0/0:26,0:21:9.03:0,9,132	0/1:11,1:5:47.86:48,0,78	0/0:0,1:1:2.22:0,2,7	0/1:7,2:6:71.16:83,0,71	0/0:4,5:7:3.37:0,3,17	0/0:12,0:12:27.95:0,28,444	0/1:2,1:2:30.06:36,0,30	1/1:4,0:3:1.16:3,1,0	0/0:9,0:8:7.08:0,7,67	1/1:3,0:2:3:36,3,0	0/0:4,0:3:2.98:0,3,22	0/0:3,0:2:6.02:0,6,83	0/0:3,0:3:6.02:0,6,103	1/1:5,1:5:0.79:78,1,0	1/1:10,1:7:2.69:42,3,0	0/0:9,0:9:4.94:0,5,61	0/0:2,2:3:0:0,0,0	./.	0/0:10,0:10:11.66:0,12,156	0/1:3,2:3:7.80:77,0,8	0/1:5,2:6:28.53:29,0,64	1/1:0,3:3:6.02:80,6,0
chr10	18754449	.	GTC	G	74.05	PASS	AB=0.953;AC=15;AF=0.288;AN=52;BaseQRankSum=3.129;DP=207;FS=48.411;HRun=0;HaplotypeScore=76.3805;InbreedingCoeff=0.2689;MQ=32.33;MQ0=13;MQRankSum=-4.338;QD=1.14;ReadPosRankSum=2.044;VQSLOD=-0.5784;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:2,0:2:0:0,0,0	0/1:5,0:5:0.55:1,0,15	./.	./.	0/0:6,0:4:0:0,0,0	0/0:14,0:14:12.63:0,13,140	0/0:27,0:22:11.01:0,11,106	0/1:9,2:6:24.95:56,0,25	1/1:1,1:2:2.22:7,2,0	0/1:10,1:10:50.72:51,0,215	0/0:11,0:9:3.48:0,3,49	0/0:14,0:14:30.97:0,31,505	0/1:5,0:4:4.76:5,0,40	1/1:7,0:6:0.91:3,1,0	0/0:10,0:9:7.08:0,7,67	1/1:2,1:2:3:42,3,0	0/0:6,0:5:8.96:0,9,86	0/0:3,0:2:6.02:0,6,88	0/0:2,0:2:6.02:0,6,91	1/1:7,1:7:7.09:24,7,0	1/1:8,2:6:1.50:4,2,0	0/0:12,0:12:4.94:0,5,61	0/0:4,0:3:0:0,0,0	0/0:3,0:2:0:0,0,0	0/0:10,0:10:11.79:0,12,179	0/0:7,0:5:5.49:0,5,86	0/0:9,0:8:15.51:0,16,215	0/1:3,0:3:1.25:1,0,14
chr10	18754455	.	GTC	G	125.16	PASS	AB=1.000;AC=16;AF=0.296;AN=54;BaseQRankSum=-1.156;DP=225;FS=0.000;HRun=0;HaplotypeScore=78.8204;InbreedingCoeff=0.4011;MQ=32.88;MQ0=16;MQRankSum=-0.869;QD=1.35;ReadPosRankSum=0.419;VQSLOD=1.2978;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:2,0:2:0:0,0,0	0/1:6,0:6:7.27:7,0,30	./.	0/1:8,0:1:0:0,0,0	0/0:6,0:4:0:0,0,0	1/1:15,0:15:12.09:92,12,0	0/1:28,0:23:20.19:37,0,20	0/0:8,0:4:2.90:0,3,51	1/1:1,1:2:3.01:43,3,0	0/0:11,0:10:23.44:0,23,320	0/0:12,0:10:3.48:0,3,50	0/0:15,0:14:30.82:0,31,422	0/0:5,0:4:9.01:0,9,101	1/1:7,0:6:0.91:3,1,0	0/0:10,0:9:7.08:0,7,63	1/1:5,0:4:2.03:6,2,0	0/0:9,0:8:14.92:0,15,198	0/0:3,0:2:6.02:0,6,87	0/0:2,0:2:3.01:0,3,38	1/1:3,5:7:3.70:46,4,0	1/1:10,0:6:2.67:22,3,0	0/0:12,0:12:4.94:0,5,61	0/0:4,0:3:0:0,0,0	0/1:4,0:3:0.08:0,0,0	0/0:10,0:10:8.78:0,9,136	0/0:7,0:5:12.04:0,12,174	0/0:11,0:10:24.06:0,24,291	0/0:3,0:3:9.03:0,9,114
chr10	18754459	.	CTG	C	333.77	PASS	AB=0.969;AC=14;AF=0.250;AN=56;BaseQRankSum=-3.237;DP=256;FS=11.560;HRun=0;HaplotypeScore=84.7599;InbreedingCoeff=0.3887;MQ=36.75;MQ0=17;MQRankSum=0.901;QD=3.48;ReadPosRankSum=0.377;VQSLOD=1.3523;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:2,0:2:0:0,0,0	0/1:6,1:7:38.79:39,0,51	1/1:5,0:1:0.89:2,1,0	0/1:11,0:2:0:0,0,0	0/0:8,0:6:3:0,3,25	1/1:13,5:18:22.89:279,23,0	1/1:29,0:24:5.54:97,6,0	0/0:10,1:7:17.71:0,18,129	1/1:2,0:2:3:25,3,0	0/0:12,0:11:26.53:0,27,316	0/0:12,0:10:3.48:0,3,36	0/0:15,0:14:18.80:0,19,315	0/0:6,0:5:14.52:0,15,135	0/0:11,0:10:1.19:0,1,15	0/0:12,0:11:7.08:0,7,42	0/0:6,0:5:5.70:0,6,30	0/0:10,0:9:15.04:0,15,175	0/0:3,0:2:6:0,6,77	0/0:2,0:2:2.94:0,3,18	0/1:9,0:8:16.33:16,0,18	1/1:10,0:6:1.50:5,2,0	0/0:12,0:12:4.94:0,5,64	0/0:4,0:3:0:0,0,0	0/1:5,0:4:0.08:0,0,0	0/0:12,0:11:8.69:0,9,70	0/0:8,0:6:18:0,18,185	0/0:11,0:10:25.93:0,26,199	0/0:3,0:3:9.02:0,9,92
chr10	18754461	.	G	GTCTC	717.96	PASS	AB=0.987;AC=22;AF=0.407;AN=54;BaseQRankSum=-4.568;DP=269;FS=20.522;HRun=0;HaplotypeScore=96.0844;InbreedingCoeff=0.3907;MQ=37.29;MQ0=18;MQRankSum=2.782;QD=4.43;ReadPosRankSum=2.903;VQSLOD=0.3158;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:2,0:2:0.47:0,0,1	0/1:7,0:7:38.43:38,0,69	0/0:7,0:2:0.47:0,0,1	0/1:10,0:3:0:1,0,0	0/0:9,0:7:2.77:0,3,25	1/1:16,1:18:24.01:286,24,0	1/1:13,14:24:7.52:166,8,0	0/0:11,0:7:14.83:0,15,109	1/1:2,0:2:3:25,3,0	0/0:12,0:11:23.26:0,23,267	0/1:13,0:11:0.44:1,0,0	0/1:15,0:14:99:108,0,144	0/0:6,0:5:14.51:0,15,112	0/0:12,0:11:4.02:0,4,21	1/1:4,6:12:3:25,3,0	0/0:5,0:5:5.80:0,6,33	0/0:11,0:10:15:0,15,162	0/1:3,0:2:14.96:15,0,32	./.	1/1:10,0:9:3.47:26,3,0	1/1:9,0:5:2.17:7,2,0	1/1:13,0:13:2.88:24,3,0	0/0:5,0:4:0:0,0,0	0/1:5,0:4:0:0,0,0	1/1:6,7:12:5.91:144,6,0	0/0:8,0:6:17.97:0,18,222	0/0:13,0:12:18.65:0,19,163	0/0:3,0:3:9.02:0,9,92
chr10	18754465	.	CTG	C	850.63	PASS	AB=0.981;AC=29;AF=0.537;AN=54;BaseQRankSum=-0.792;DP=289;FS=4.213;HRun=0;HaplotypeScore=93.4535;InbreedingCoeff=0.0691;MQ=40.28;MQ0=18;MQRankSum=-2.213;QD=3.88;ReadPosRankSum=1.600;VQSLOD=1.9888;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:2,0:2:0:0,0,0	1/1:8,0:8:14.75:119,15,0	0/0:8,0:3:0.68:0,1,38	0/1:17,0:6:4.37:4,0,49	0/0:9,0:7:1.22:0,1,4	1/1:20,1:21:28.89:329,29,0	1/1:29,0:24:11.82:128,12,0	0/1:14,0:10:12.64:21,0,13	1/1:2,0:2:2.50:9,2,0	0/1:14,0:13:7.46:7,0,89	0/0:13,0:11:0.47:0,0,2	0/1:11,4:14:99:112,0,103	0/1:6,0:5:20.70:25,0,21	1/1:11,0:10:3.36:11,3,0	0/1:13,0:12:5.52:16,0,6	1/1:5,0:5:4.87:17,5,0	0/1:12,0:11:7.21:12,0,7	0/1:3,0:2:12.01:15,0,12	./.	1/1:10,0:9:5.52:27,6,0	0/0:9,0:5:0:0,0,0	0/0:14,0:14:6.76:0,7,34	0/1:5,0:4:0:0,0,0	0/1:8,0:7:0.08:0,0,0	0/0:13,0:12:0.63:0,1,2	0/1:10,0:8:2.06:13,0,2	1/1:13,0:12:14.47:93,14,0	1/1:3,0:3:6.63:21,7,0
chr10	18754467	.	G	GTCTC	1318.96	PASS	AB=1.000;AC=36;AF=0.667;AN=54;BaseQRankSum=-4.025;DP=298;FS=11.862;HRun=0;HaplotypeScore=95.8712;InbreedingCoeff=0.1733;MQ=40.55;MQ0=21;MQRankSum=0.546;QD=5.13;ReadPosRankSum=0.453;VQSLOD=1.1613;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:2,0:2:0.47:0,0,1	0/1:8,0:8:6.33:88,0,6	0/0:13,0:5:3.55:0,4,47	0/1:19,0:8:4.64:5,0,55	0/0:9,0:7:0.96:0,1,3	1/1:22,0:22:30.01:336,30,0	1/1:30,0:25:15.11:198,15,0	0/1:13,0:10:0.93:10,0,1	1/1:2,0:2:2.50:9,2,0	0/1:13,0:12:5.45:5,0,82	0/1:13,0:11:0.44:1,0,0	1/1:13,2:14:17.93:366,18,0	1/1:6,0:5:1.18:27,1,0	1/1:12,0:11:0.27:5,0,0	1/1:13,0:12:5.99:49,6,0	1/1:5,0:5:4.53:15,5,0	1/1:12,0:11:6.81:21,7,0	./.	1/1:3,0:1:2.94:18,3,0	1/1:10,0:9:2.60:10,3,0	0/0:9,0:5:0.41:0,0,0	1/1:4,8:14:2.88:73,3,0	0/0:5,0:4:0:0,0,0	0/1:8,0:7:0:0,0,0	1/1:13,0:12:5.91:144,6,0	0/1:10,0:8:1.33:1,0,42	0/1:13,0:12:13.55:33,0,14	1/1:3,0:3:6.63:21,7,0
chr10	18754489	.	CTT	C	2585.85	PASS	AB=0.598;AC=35;AF=0.648;AN=54;BaseQRankSum=1.035;DP=319;FS=34.699;HRun=3;HaplotypeScore=94.4366;InbreedingCoeff=0.6526;MQ=65.03;MQ0=11;MQRankSum=-3.696;QD=15.03;ReadPosRankSum=2.622;VQSLOD=-0.7089;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:12,0:12:1.94:21,2,0	1/1:6,5:11:20.17:285,20,0	0/0:19,0:9:24.29:0,24,233	0/0:32,0:19:14.89:0,15,224	1/1:4,3:7:9.30:94,9,0	0/0:23,0:23:37.95:0,38,308	0/0:22,0:20:14.03:0,14,183	1/1:2,19:20:10:442,10,0	1/1:3,1:4:5.95:63,6,0	0/1:7,6:13:20.77:326,0,21	1/1:2,8:10:1.22:22,1,0	0/0:14,0:14:26.43:0,26,208	1/1:3,3:6:2.79:172,3,0	1/1:0,9:9:5.60:57,6,0	0/0:11,0:11:14.69:0,15,125	1/1:0,4:4:6.02:89,6,0	1/1:1,11:12:20.96:264,21,0	./.	1/1:5,0:3:5.93:40,6,0	1/1:9,5:14:13.15:107,13,0	1/1:7,0:7:2.60:18,3,0	0/0:13,0:13:26.76:0,27,229	0/1:1,3:4:0:0,0,0	0/1:1,6:7:0.08:0,0,0	0/0:11,0:10:12.50:0,13,146	1/1:3,7:10:24.04:332,24,0	1/1:5,7:11:21.91:277,22,0	1/1:1,3:4:12.02:159,12,0
chr10	18754558	.	TTATATATA	T	9281.48	PASS	AB=0.556;AC=41;AF=0.788;AN=52;BaseQRankSum=-3.336;DP=282;FS=54.859;HRun=0;HaplotypeScore=107.0288;InbreedingCoeff=0.7196;MQ=58.77;MQ0=0;MQRankSum=-5.452;QD=42.19;ReadPosRankSum=-2.636;VQSLOD=1.8166;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,4:10:9.03:216,9,0	1/1:4,8:12:21.07:554,21,0	./.	0/0:10,0:7:6.49:0,6,82	1/1:5,20:25:47.77:1227,48,0	0/0:6,0:25:50.96:0,51,445	0/0:1,0:3:6:0,6,52	1/1:8,8:16:24.03:460,24,0	1/1:0,9:9:21.07:547,21,0	1/1:7,8:15:21.07:525,21,0	1/1:1,10:11:30.10:782,30,0	0/0:2,0:9:20.98:0,21,174	1/1:2,4:6:6.02:158,6,0	1/1:3,3:6:9.03:231,9,0	0/1:1,0:5:3.62:4,0,63	1/1:2,9:11:27.09:712,27,0	1/1:6,4:10:12.04:316,12,0	1/1:0,7:7:12.04:316,12,0	1/1:4,3:7:9.02:185,9,0	1/1:7,12:19:35.82:764,36,0	1/1:3,3:6:6.02:152,6,0	./.	1/1:5,9:14:18.06:473,18,0	1/1:4,2:6:3.01:79,3,0	0/0:0,0:10:26.97:0,27,225	1/1:2,8:10:24.08:633,24,0	1/1:2,12:14:33.11:869,33,0	1/1:0,1:1:3.01:79,3,0
chr10	18755620	.	TCACACACACACA	T	1467.54	PASS	AB=0.961;AC=28;AF=0.636;AN=44;BaseQRankSum=2.423;DP=499;FS=0.948;HRun=0;HaplotypeScore=156.2560;InbreedingCoeff=0.4101;MQ=66.23;MQ0=16;MQRankSum=-2.248;QD=5.06;ReadPosRankSum=1.003;VQSLOD=2.8038;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:9.50:0,10,395	./.	./.	./.	./.	0/0:17,0:17:11.53:0,12,119	0/1:29,0:28:1.86:2,0,183	./.	0/1:16,1:14:32.87:96,0,33	1/1:21,0:19:13.63:103,14,0	1/1:12,0:12:3.47:28,3,0	0/1:13,0:13:34.80:35,0,200	1/1:14,0:14:3.47:26,3,0	1/1:12,6:18:6.02:204,6,0	0/1:16,0:17:42.56:43,0,90	0/0:23,0:23:21.07:0,21,1074	1/1:25,1:26:18:183,18,0	0/0:21,0:20:45.05:0,45,1881	./.	1/1:3,0:8:5.99:87,6,0	1/1:22,0:31:3.01:44,3,0	0/0:13,0:12:15.05:0,15,275	1/1:16,0:15:1.84:34,2,0	1/1:24,10:32:9.03:295,9,0	0/0:12,0:12:9:0,9,107	1/1:9,0:9:2.98:15,3,0	1/1:8,1:12:12.03:295,12,0	1/1:10,0:10:9.48:135,9,0
chr10	18755961	.	A	AT	947.39	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-8.632;DP=646;FS=0.000;HRun=7;HaplotypeScore=64.1576;InbreedingCoeff=0.9992;MQ=85.03;MQ0=0;MQRankSum=-3.042;QD=25.61;ReadPosRankSum=1.606;VQSLOD=4.2880;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,102,970	0/0:9,0:9:27.03:0,27,255	0/0:17,0:17:48.07:0,48,458	0/0:23,0:23:56.26:0,56,512	0/0:22,0:22:63.10:0,63,608	0/0:21,0:21:60.05:0,60,569	0/0:33,0:33:96.10:0,96,906	0/0:26,0:26:66.09:0,66,633	0/0:15,0:15:45.07:0,45,435	0/0:28,0:28:69.10:0,69,666	0/0:14,0:14:42.07:0,42,406	0/0:27,0:27:78.12:0,78,753	0/0:27,0:27:72.09:0,72,690	0/0:22,0:22:63.08:0,63,603	0/0:29,0:29:84.13:0,84,811	1/1:2,21:23:57.13:672,57,0	0/0:29,0:29:78.10:0,78,748	1/1:2,12:14:33.10:397,33,0	0/0:17,0:17:42.04:0,42,399	0/0:18,0:18:48.08:0,48,463	0/0:36,0:36:96.08:0,96,911	0/0:15,0:15:42.06:0,42,401	0/0:18,0:18:45.05:0,45,428	0/0:24,0:24:66.05:0,66,628	0/0:24,0:23:63.98:0,64,610	0/0:34,0:35:89.14:0,89,838	0/0:26,0:26:69.11:0,69,666	0/0:15,0:15:42.07:0,42,405
chr10	18756837	.	G	GC	25005.44	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-14.365;DP=826;FS=1.452;HRun=3;HaplotypeScore=70.7177;InbreedingCoeff=1.0000;MQ=84.53;MQ0=0;MQRankSum=-5.918;QD=38.18;ReadPosRankSum=5.878;VQSLOD=4.6611;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,47:47:99:1890,135,0	1/1:1,14:15:39.13:546,39,0	0/0:23,0:23:53.92:0,54,610	0/0:27,0:27:69.02:0,69,772	1/1:0,25:25:75.21:1021,75,0	1/1:0,19:18:51.17:714,51,0	1/1:4,32:36:90.30:1260,90,0	0/0:27,0:27:66.19:0,66,783	1/1:1,31:32:84.28:1176,84,0	1/1:1,34:35:99:1428,102,0	1/1:0,21:21:60.20:838,60,0	1/1:1,25:26:66.22:923,66,0	1/1:1,38:39:99:1509,108,0	1/1:2,37:39:99:1493,108,0	1/1:3,33:36:93.31:1302,93,0	1/1:1,38:39:99:1512,108,0	1/1:0,30:30:84.28:1176,84,0	1/1:0,17:17:48.16:672,48,0	0/0:28,0:28:78.23:0,78,925	0/0:29,0:29:84.16:0,84,966	0/0:37,0:37:99:0,102,1200	1/1:0,30:30:84.28:1176,84,0	1/1:1,20:22:54.18:755,54,0	1/1:4,43:47:99:1737,126,0	1/1:1,33:35:93.31:1294,93,0	1/1:0,20:20:60.18:821,60,0	1/1:1,26:26:75.25:1045,75,0	1/1:0,18:18:51.17:714,51,0
chr10	18757611	.	T	TA	7970.25	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=0.751;DP=876;FS=2.156;HRun=4;HaplotypeScore=96.8666;InbreedingCoeff=0.9998;MQ=75.00;MQ0=0;MQRankSum=0.383;QD=35.74;ReadPosRankSum=2.020;VQSLOD=4.8056;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:84.24:0,84,953	0/0:17,0:17:51.15:0,51,577	0/0:15,0:16:44.12:0,44,462	0/0:31,0:31:45.37:0,45,773	0/0:37,0:37:99:0,105,1191	1/1:5,38:42:99:1395,102,0	1/1:1,22:23:63.21:862,63,0	0/0:40,0:40:99:0,111,1231	0/0:28,0:28:81.20:0,81,900	0/0:46,0:46:99:0,135,1531	0/0:37,0:37:99:0,102,1157	1/1:1,27:29:81.27:1103,81,0	0/0:41,0:41:99:0,117,1319	0/0:34,0:34:99:0,99,1113	1/1:1,45:46:99:1640,120,0	0/0:37,0:37:75.21:0,75,850	0/0:12,0:12:33.09:0,33,373	0/0:22,0:22:37.44:0,37,487	0/0:19,0:19:48.13:0,48,544	0/0:34,0:34:96.26:0,96,1079	0/0:24,0:24:66.19:0,66,748	1/1:5,44:49:99:1765,129,0	0/0:32,0:32:90.23:0,90,1000	0/0:32,0:32:93.26:0,93,1055	1/1:1,32:33:90.28:1206,90,0	0/0:33,0:33:93.24:0,93,1039	0/0:39,0:39:99:0,114,1269	0/0:11,0:11:30.09:0,30,340
chr10	18757675	.	T	TACACACTGATACACAC	6355.97	PASS	AB=0.577;AC=3;AF=0.054;AN=56;BaseQRankSum=2.103;DP=1140;FS=6.069;HRun=0;HaplotypeScore=485.8109;InbreedingCoeff=0.7349;MQ=64.39;MQ0=2;MQRankSum=-8.656;QD=77.51;ReadPosRankSum=3.535;VQSLOD=3.9600;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:52.73:0,53,4370	0/0:13,0:13:36.11:0,36,1484	0/0:40,0:38:99:0,102,2931	0/0:32,0:29:54.60:0,55,1860	0/0:46,0:46:99:0,132,5303	0/0:44,0:44:99:0,108,4320	0/0:28,0:28:78.70:0,79,2765	0/0:74,0:74:99:0,203,6136	0/0:38,0:38:99:0,114,4663	0/0:68,0:67:99:0,196,7771	0/0:34,0:34:96.33:0,96,4134	0/0:44,0:44:99:0,123,4607	0/0:41,0:41:99:0,120,4870	0/0:48,0:48:99:0,141,5906	0/0:61,0:61:99:0,169,6767	1/1:5,33:51:54.19:4250,54,0	0/0:22,0:21:63.20:0,63,2449	0/1:8,15:29:6.01:2106,0,6	0/0:21,0:20:57.20:0,57,2052	0/0:33,0:33:90.31:0,90,3589	0/0:50,0:50:99:0,141,5599	0/0:57,0:57:99:0,159,6198	0/0:41,0:41:99:0,114,4186	0/0:45,0:45:99:0,124,4783	0/0:28,0:28:68.84:0,69,2480	0/0:40,0:40:99:0,111,4460	0/0:33,0:33:99:0,99,4169	0/0:36,0:36:99:0,108,4307
chr10	18758044	.	AAC	A	414.46	PASS	AB=0.964;AC=15;AF=0.268;AN=56;BaseQRankSum=8.897;DP=965;FS=4.876;HRun=0;HaplotypeScore=182.3486;InbreedingCoeff=0.0249;MQ=52.29;MQ0=19;MQRankSum=-5.440;QD=1.09;ReadPosRankSum=1.815;VQSLOD=1.9146;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:49:12.79:0,13,78	0/1:14,0:14:5.21:5,0,371	0/0:45,0:15:2.88:0,3,15	0/0:43,0:15:2.92:0,3,17	0/0:26,1:29:5.02:0,5,626	1/1:16,0:16:5.10:16,5,0	0/1:24,0:24:11.36:11,0,23	0/0:30,0:30:21.46:0,21,142	0/0:13,0:26:15.23:0,15,100	0/0:46,2:47:29.47:0,29,1308	0/0:17,0:17:36.07:0,36,530	0/1:36,0:35:22.51:45,0,23	0/0:47,2:49:14.03:0,14,1226	0/1:39,4:42:73.91:74,0,726	0/1:44,0:43:11.91:20,0,12	0/1:37,0:37:0.71:79,0,1	0/0:31,4:35:17.18:0,17,1084	0/1:12,0:11:2.63:3,0,42	0/0:16,0:18:30.39:0,30,255	0/0:21,0:23:20.48:0,20,232	0/0:44,0:73:42.49:0,42,438	0/1:39,0:39:12.73:30,0,13	0/0:38,1:39:40.24:0,40,1036	0/0:55,0:54:45.19:0,45,1116	1/1:31,0:32:28.81:124,29,0	0/1:31,3:34:41.43:41,0,720	0/1:26,4:32:85.04:85,0,665	0/1:16,2:18:35.55:36,0,517
chr10	18758059	.	ACACACACACACG	A	2909.56	PASS	AB=0.952;AC=15;AF=0.268;AN=56;BaseQRankSum=10.535;DP=939;FS=49.225;HRun=0;HaplotypeScore=310.2912;InbreedingCoeff=0.7025;MQ=51.24;MQ0=22;MQRankSum=-9.374;QD=9.30;ReadPosRankSum=-3.161;VQSLOD=0.7791;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:24.30:0,24,421	0/0:14,0:14:9.10:0,9,1477	0/0:41,0:13:13.24:0,13,317	0/0:52,0:18:19.30:0,19,610	0/0:29,0:29:66.04:0,66,2785	1/1:15,0:15:18.12:169,18,0	0/1:31,0:30:34.29:474,0,34	0/0:29,0:28:26.69:0,27,1208	0/0:27,0:26:19.71:0,20,437	0/0:51,0:50:99:0,138,5821	0/0:18,0:17:39.10:0,39,1921	1/1:35,1:35:25.11:359,25,0	0/0:46,0:46:99:0,115,4991	0/0:38,0:37:71.99:0,72,3087	1/1:43,1:43:31.74:330,32,0	1/1:29,2:31:43.07:641,43,0	0/0:36,0:36:93.29:0,93,4741	0/1:10,2:10:99:140,0,151	0/0:20,0:15:34.93:0,35,1134	0/0:20,0:20:11.58:0,12,1013	0/1:81,0:81:72.65:73,0,2193	1/1:33,2:35:15.44:274,15,0	0/0:35,0:35:84.25:0,84,4282	0/0:46,0:45:95.91:0,96,4416	1/1:28,0:28:45.39:643,45,0	0/0:30,0:30:84.22:0,84,3567	0/0:31,0:31:72.25:0,72,3446	0/0:17,0:17:48.16:0,48,2467
chr10	18758061	.	ACACACACACG	A	6571.19	PASS	AB=0.988;AC=19;AF=0.339;AN=56;BaseQRankSum=6.054;DP=944;FS=33.860;HRun=0;HaplotypeScore=272.4877;InbreedingCoeff=0.5541;MQ=51.49;MQ0=23;MQRankSum=-10.358;QD=17.48;ReadPosRankSum=-4.039;VQSLOD=2.3518;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:43:23.49:0,23,373	0/1:14,1:15:34.61:35,0,1231	0/0:42,0:14:19.01:0,19,231	0/0:48,0:17:12.18:0,12,460	0/0:31,0:31:74.98:0,75,2379	1/1:1,14:15:21.07:483,21,0	1/1:27,4:31:0.60:857,1,0	0/1:30,0:29:72.36:72,0,882	0/0:28,0:27:17.05:0,17,395	0/0:51,0:50:99:0,140,4883	0/0:18,0:17:39.10:0,39,1622	1/1:8,29:36:22.08:607,22,0	0/0:46,0:46:99:0,105,4186	0/0:38,0:37:72.44:0,72,2595	1/1:12,33:44:51.17:997,51,0	1/1:6,25:31:45.15:1099,45,0	0/0:39,0:39:99:0,99,4078	0/1:11,0:9:99:107,0,100	0/0:20,0:16:32.39:0,32,879	0/1:20,0:20:14.07:14,0,750	0/1:78,0:78:99:194,0,1663	1/1:10,25:35:42.10:815,42,0	0/0:34,0:34:84.24:0,84,3628	0/0:47,0:45:97.77:0,98,3705	1/1:3,24:27:48.03:1292,48,0	0/0:30,0:30:84:0,84,2954	0/0:32,0:32:75.22:0,75,2916	0/0:18,0:18:51.16:0,51,2123
chr10	18758226	.	A	AC	5066.92	PASS	AB=0.750;AC=53;AF=0.946;AN=56;BaseQRankSum=4.271;DP=532;FS=0.000;HRun=0;HaplotypeScore=323.5129;InbreedingCoeff=0.6019;MQ=54.59;MQ0=0;MQRankSum=-5.736;QD=9.69;ReadPosRankSum=2.423;VQSLOD=4.1446;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:29:74.59:333,75,0	1/1:5,0:5:13.42:56,13,0	0/0:9,0:9:16.77:0,17,71	0/1:6,2:9:37.80:74,0,38	1/1:21,0:21:28.61:132,29,0	1/1:11,0:11:22.79:121,23,0	1/1:20,0:20:48.77:191,49,0	1/1:18,1:19:53.76:282,54,0	1/1:15,1:16:41.42:172,41,0	1/1:34,0:34:91.78:517,92,0	1/1:9,1:10:19.75:84,20,0	1/1:24,0:24:60.23:247,60,0	1/1:26,0:26:57.51:227,58,0	1/1:39,0:39:91.92:352,92,0	1/1:17,0:17:43.43:170,43,0	1/1:5,0:5:12.29:46,12,0	1/1:28,0:27:48.02:230,48,0	1/1:10,0:10:22.92:88,23,0	1/1:12,0:12:33.15:154,33,0	1/1:9,0:9:17.95:93,18,0	1/1:40,0:40:44.54:171,45,0	1/1:19,0:19:33.98:144,34,0	1/1:17,0:17:16.88:130,17,0	1/1:25,0:24:36.91:138,37,0	1/1:24,0:24:57.93:247,58,0	1/1:23,0:23:61.06:310,61,0	1/1:18,0:18:47.27:204,47,0	1/1:13,0:13:35.42:154,35,0
chr10	18758988	.	TA	T	2098.21	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=2.271;DP=749;FS=1.034;HRun=2;HaplotypeScore=89.1784;InbreedingCoeff=0.9999;MQ=92.65;MQ0=0;MQRankSum=-1.783;QD=35.56;ReadPosRankSum=0.411;VQSLOD=3.9129;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:99:0,99,1481	0/0:17,0:17:51.17:0,51,764	0/0:31,0:31:57.08:0,57,1070	0/0:31,0:32:69.69:0,70,1127	0/0:25,0:25:75.25:0,75,1118	0/0:25,0:25:72.21:0,72,1018	0/0:22,0:22:66.22:0,66,987	0/0:25,0:25:75.25:0,75,1097	0/0:24,0:24:69.19:0,69,993	0/0:41,0:41:99:0,120,1776	0/0:13,0:13:39.13:0,39,583	0/0:24,0:24:72.22:0,72,1030	0/0:29,0:29:87.29:0,87,1279	0/0:26,0:26:78.26:0,78,1163	0/0:32,0:32:96.31:0,96,1403	1/1:0,37:37:99:1402,108,0	0/0:26,0:26:78.26:0,78,1168	1/1:0,22:22:63.20:818,63,0	0/0:25,0:25:72.24:0,72,1067	0/0:33,0:33:96.33:0,96,1438	0/0:37,0:37:99:0,108,1589	0/0:16,0:16:45.15:0,45,675	0/0:25,0:25:72.23:0,72,1058	0/0:19,0:19:45.15:0,45,673	0/0:24,0:24:72.24:0,72,1073	0/0:34,0:34:99:0,102,1483	0/0:40,0:40:99:0,120,1767	0/0:12,0:12:36.12:0,36,540
chr10	18761326	.	AGCCCC	A	768.14	PASS	AC=8;AF=0.148;AN=54;BaseQRankSum=1.764;DP=328;FS=5.099;HRun=0;HaplotypeScore=60.0515;InbreedingCoeff=0.7685;MQ=84.56;MQ0=2;MQRankSum=-3.056;QD=9.14;ReadPosRankSum=-0.337;VQSLOD=0.9572;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:22:50.41:373,50,0	0/0:3,0:3:5.98:0,6,47	0/0:20,0:15:34.04:0,34,522	0/0:19,0:15:29.16:0,29,480	./.	0/0:10,0:10:25.90:0,26,364	0/0:22,0:22:63.62:0,64,1073	0/0:14,0:14:39.03:0,39,560	1/1:1,0:19:17.88:198,18,0	0/0:3,0:4:6.01:0,6,114	0/0:2,0:2:3.01:0,3,75	0/0:16,0:16:38.74:0,39,454	0/0:6,0:6:18.06:0,18,534	0/0:7,0:7:18.48:0,18,409	0/0:17,0:18:39.58:0,40,691	1/1:1,23:24:12.04:254,12,0	0/0:12,0:12:33.02:0,33,841	1/1:0,19:19:5.99:89,6,0	0/0:11,0:11:27.02:0,27,404	0/0:4,0:4:12:0,12,164	0/0:18,0:18:33.41:0,33,423	0/0:14,0:14:35.68:0,36,411	0/0:6,0:6:9:0,9,96	0/0:7,0:7:18.06:0,18,452	0/0:10,0:11:29.93:0,30,377	0/0:4,0:4:6.02:0,6,171	0/0:14,0:14:35.50:0,35,741	0/0:2,0:2:3.01:0,3,87
chr10	18761332	.	C	CA	289.81	PASS	AB=0.969;AC=8;AF=0.148;AN=54;BaseQRankSum=-2.686;DP=327;FS=64.178;HRun=0;HaplotypeScore=55.1681;InbreedingCoeff=0.6254;MQ=76.91;MQ0=2;MQRankSum=1.770;QD=7.07;ReadPosRankSum=0.546;VQSLOD=1.1272;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:53.72:0,54,388	0/0:2,0:2:2.37:0,2,8	0/0:19,0:14:30.58:0,31,297	0/0:16,0:11:13.88:0,14,143	./.	0/0:12,0:12:27:0,27,235	0/0:22,0:22:52.69:0,53,431	1/1:9,0:9:5.27:103,5,0	0/0:20,0:20:13.65:0,14,72	0/0:3,0:3:2.90:0,3,16	0/0:2,0:2:3:0,3,25	0/0:15,0:15:32.98:0,33,282	0/0:8,0:8:16.96:0,17,122	0/0:8,0:8:15.04:0,15,85	0/0:18,0:18:40.21:0,40,339	0/0:24,0:23:15.39:0,15,111	0/0:12,0:12:29.21:0,29,191	0/0:21,0:21:10.20:0,10,71	1/1:2,6:10:19.47:158,19,0	1/1:3,0:3:6.88:50,7,0	0/1:14,1:15:0.39:108,0,0	0/0:14,0:14:26.98:0,27,231	0/0:6,0:6:3.41:0,3,19	0/0:7,0:7:16.08:0,16,121	0/0:9,0:9:26.51:0,27,205	0/0:5,0:5:5.67:0,6,29	0/0:20,0:20:37.13:0,37,265	0/1:4,0:4:0:0,0,0
chr10	18761670	.	C	CTG	27160.01	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-8.555;DP=712;FS=3.701;HRun=0;HaplotypeScore=105.3459;InbreedingCoeff=0.9880;MQ=76.00;MQ0=0;MQRankSum=-5.043;QD=47.48;ReadPosRankSum=6.560;VQSLOD=6.0469;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,48:51:99:2356,126,0	1/1:0,12:12:33.01:616,33,0	0/0:14,0:14:34.67:0,35,531	0/0:21,0:21:56.26:0,56,818	1/1:1,14:15:42.14:785,42,0	1/1:1,24:25:63.22:1179,63,0	1/1:2,31:33:75.26:1404,75,0	0/0:30,0:30:78.25:0,78,1114	1/1:4,26:30:75.26:1385,75,0	1/1:1,18:19:54.15:938,54,0	1/1:2,13:15:33.11:617,33,0	1/1:1,29:30:75.26:1404,75,0	1/1:1,21:22:60.21:1122,60,0	1/1:2,31:33:87.30:1627,87,0	1/1:1,28:29:72.25:1348,72,0	1/1:4,23:26:63.22:1179,63,0	1/1:1,36:37:99:1894,102,0	1/1:1,30:31:84.29:1572,84,0	0/0:19,0:19:51.16:0,51,731	0/0:12,0:12:30.10:0,30,440	0/0:44,0:44:99:0,123,1757	1/1:0,27:27:69.24:1291,69,0	1/1:2,13:16:39.13:725,39,0	1/1:1,32:35:74.75:1402,75,0	1/1:2,20:23:60.20:1069,60,0	1/1:2,36:38:99:2068,114,0	1/1:2,19:21:54.19:1010,54,0	1/1:0,3:3:9.03:168,9,0
chr10	18762059	.	A	AG	17825.34	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=-9.026;DP=713;FS=5.121;HRun=0;HaplotypeScore=75.0274;InbreedingCoeff=0.9973;MQ=82.89;MQ0=0;MQRankSum=-3.788;QD=43.90;ReadPosRankSum=5.432;VQSLOD=5.1102;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,50:50:99:2203,138,0	1/1:0,9:9:24.08:383,24,0	0/0:19,0:19:51.04:0,51,613	0/0:24,0:24:61.22:0,61,727	1/1:1,13:14:36.12:575,36,0	0/0:21,0:21:63.19:0,63,848	0/0:32,0:32:96.28:0,96,1289	0/0:32,0:32:93.29:0,93,1253	1/1:0,26:26:69.24:1103,69,0	1/1:1,30:30:87.28:1350,87,0	1/1:0,15:15:45.05:686,45,0	0/0:37,0:37:99:0,108,1462	1/1:0,28:28:78.27:1245,78,0	1/1:0,31:31:87.30:1389,87,0	0/0:25,0:25:72.23:0,72,989	1/1:0,25:25:63.21:1007,63,0	1/1:1,33:34:90.31:1438,90,0	1/1:1,25:26:75.26:1198,75,0	0/0:21,0:21:63.18:0,63,832	0/0:22,0:22:66.22:0,66,920	0/0:44,0:44:99:0,129,1767	0/0:18,0:18:54.18:0,54,752	1/1:0,10:10:27.09:431,27,0	1/1:1,38:39:99:1726,108,0	0/0:12,0:12:36.12:0,36,499	1/1:0,31:31:90.30:1416,90,0	1/1:0,32:32:90.31:1437,90,0	1/1:0,5:5:15.05:239,15,0
chr10	18763600	.	C	CT	1517.30	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-8.163;DP=692;FS=7.303;HRun=8;HaplotypeScore=69.0522;InbreedingCoeff=0.9937;MQ=79.70;MQ0=1;MQRankSum=1.148;QD=27.59;ReadPosRankSum=1.296;VQSLOD=4.2693;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,36:40:99:1128,99,0	0/0:14,0:14:42.02:0,42,384	0/0:28,0:26:35.29:0,35,393	0/0:17,0:17:16.29:0,16,243	0/0:29,0:29:78.03:0,78,714	0/0:29,0:29:84.04:0,84,769	0/0:25,0:25:69.03:0,69,631	0/0:29,0:29:72.02:0,72,659	1/1:1,14:15:45.12:511,45,0	0/0:22,0:22:60.03:0,60,547	0/0:18,0:18:48.02:0,48,439	0/0:26,0:26:66.01:0,66,595	0/0:26,0:26:71.98:0,72,643	0/0:24,0:24:63.03:0,63,577	0/0:19,0:19:54.02:0,54,494	0/0:18,0:18:54.03:0,54,494	0/0:24,0:24:72:0,72,648	0/0:23,0:23:60.02:0,60,549	0/0:20,0:20:54.03:0,54,494	0/0:34,0:34:89.99:0,90,814	0/0:22,0:22:63.03:0,63,576	0/0:24,0:24:53.99:0,54,490	0/0:30,0:30:81.03:0,81,741	0/0:20,0:20:48.02:0,48,439	0/0:36,0:35:99:0,99,906	0/0:34,1:35:61.42:0,61,817	0/0:26,0:26:75.02:0,75,681	0/0:19,0:19:51.02:0,51,467
chr10	18763916	.	T	TTTCTTGAGTGTCTACT	26439.13	PASS	AB=0.750;AC=55;AF=0.982;AN=56;BaseQRankSum=-0.059;DP=303;FS=7.690;HRun=0;HaplotypeScore=356.1766;InbreedingCoeff=-0.0356;MQ=56.38;MQ0=0;MQRankSum=-1.717;QD=87.26;ReadPosRankSum=1.174;VQSLOD=3.4090;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:21:54.09:1880,54,0	1/1:7,0:7:9:317,9,0	1/1:1,0:4:9.03:645,9,0	0/1:4,1:6:9.01:406,0,9	1/1:10,0:10:12.03:560,12,0	1/1:8,0:8:12.04:667,12,0	1/1:17,0:17:39.13:1517,39,0	1/1:21,0:21:63.22:2579,63,0	1/1:12,0:12:26.58:680,27,0	1/1:11,0:11:30.09:1384,30,0	1/1:10,0:10:17.89:473,18,0	1/1:14,0:14:42.07:1626,42,0	1/1:11,0:11:24.48:1114,24,0	1/1:22,0:22:48.04:2096,48,0	1/1:15,0:15:32.65:1160,33,0	1/1:10,0:10:21.07:1006,21,0	1/1:5,0:5:15.05:569,15,0	1/1:4,0:4:6.02:444,6,0	1/1:10,0:10:24.08:1219,24,0	1/1:11,0:11:23.57:386,24,0	1/1:12,0:12:31.86:1035,32,0	1/1:10,0:10:29.17:1055,29,0	1/1:2,0:2:6.02:282,6,0	1/1:7,0:7:9.46:209,9,0	1/1:9,0:9:22.33:546,22,0	1/1:15,0:15:30.02:869,30,0	1/1:15,0:15:36.06:1454,36,0	1/1:4,0:4:8.89:261,9,0
chr10	18769548	.	G	GAC	5404.76	PASS	AB=0.699;AC=19;AF=0.352;AN=54;BaseQRankSum=-7.694;DP=882;FS=13.227;HRun=0;HaplotypeScore=186.5631;InbreedingCoeff=0.6212;MQ=44.89;MQ0=72;MQRankSum=-3.759;QD=13.18;ReadPosRankSum=-2.781;VQSLOD=2.8595;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:40:68.75:0,69,842	0/0:14,0:13:21.07:0,21,267	./.	0/0:58,0:10:2.47:0,2,201	0/0:26,0:24:48:0,48,587	0/1:8,7:14:4.81:335,0,5	1/1:20,14:31:29.80:444,30,0	0/1:30,23:42:99:723,0,244	0/0:34,0:34:69.18:0,69,837	0/0:32,0:30:69.14:0,69,832	0/0:16,0:16:33.11:0,33,419	1/1:15,11:23:13.24:223,13,0	0/0:35,0:33:71.15:0,71,843	0/0:27,0:24:41.92:0,42,534	1/1:20,19:34:34.44:494,34,0	0/1:17,11:26:10.84:333,0,11	0/0:32,0:32:64.08:0,64,791	0/1:14,8:17:2.14:398,0,2	1/1:26,4:22:27.06:392,27,0	0/1:10,9:13:40.78:276,0,41	1/1:67,32:79:57.91:1125,58,0	1/1:15,4:17:15.05:231,15,0	0/0:15,0:13:23.45:0,23,304	0/0:49,0:44:83.67:0,84,1020	1/1:15,9:18:29.96:431,30,0	0/0:19,0:18:30.09:0,30,369	0/0:10,0:10:17.78:0,18,223	0/0:13,0:12:24.08:0,24,305
chr10	18769571	.	GACACACAC	G	1869.45	PASS	AB=0.867;AC=20;AF=0.370;AN=54;BaseQRankSum=1.846;DP=961;FS=8.242;HRun=0;HaplotypeScore=244.1551;InbreedingCoeff=0.7052;MQ=41.40;MQ0=70;MQRankSum=-5.360;QD=5.22;ReadPosRankSum=-2.747;VQSLOD=0.8223;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:42:23.96:0,24,385	0/0:6,0:11:6:0,6,59	./.	0/0:89,0:15:2.97:0,3,20	0/0:20,0:20:13.38:0,13,291	0/1:14,7:20:8.09:49,0,8	1/1:23,12:32:8.73:230,9,0	0/0:47,0:36:11.80:0,12,92	0/0:36,0:35:27.95:0,28,519	0/0:32,0:30:59.93:0,60,1310	0/0:12,0:11:3.01:0,3,123	1/1:14,21:31:23.83:389,24,0	0/0:34,0:34:33.83:0,34,845	0/0:30,0:26:14.02:0,14,189	1/1:20,16:32:24.38:300,24,0	1/1:10,14:22:32.95:606,33,0	0/0:35,0:38:56.14:0,56,1025	1/1:16,0:12:7.70:107,8,0	1/1:24,0:18:5.81:37,6,0	1/1:18,0:20:3.39:11,3,0	0/1:96,0:75:0.13:137,0,0	1/1:10,9:17:5.79:78,6,0	0/0:18,0:17:7.33:0,7,155	0/0:51,0:57:65.91:0,66,1456	1/1:15,8:17:9.89:113,10,0	0/0:23,0:23:30.51:0,31,503	0/0:11,0:15:15.29:0,15,229	0/0:15,0:14:8.99:0,9,142
chr10	18769609	.	CACAG	C	2487.23	PASS	AB=0.995;AC=19;AF=0.339;AN=56;BaseQRankSum=0.670;DP=875;FS=0.365;HRun=0;HaplotypeScore=183.0685;InbreedingCoeff=0.2107;MQ=53.42;MQ0=21;MQRankSum=-0.153;QD=6.17;ReadPosRankSum=0.987;VQSLOD=2.6319;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:13,34:46:2.39:55,2,0	1/1:10,0:10:14.11:115,14,0	0/0:42,0:21:39.04:0,39,417	0/0:48,0:21:43.22:0,43,561	0/1:18,0:18:39.68:127,0,40	0/0:20,0:20:32.44:0,32,260	0/0:38,0:37:35.95:0,36,430	0/0:27,0:21:53.79:0,54,464	1/1:10,26:36:11.23:135,11,0	0/1:43,0:42:99:451,0,247	0/1:10,0:9:34.64:60,0,35	0/0:43,0:42:46.12:0,46,503	0/1:42,0:41:91.48:310,0,91	1/1:39,0:35:7.31:333,7,0	0/0:35,0:35:55.31:0,55,496	0/0:32,0:32:22.50:0,23,427	0/1:44,0:43:99:375,0,170	0/0:20,0:20:46.28:0,46,343	0/0:23,0:20:57.35:0,57,469	0/0:21,0:19:41.73:0,42,321	0/0:76,0:67:99:0,99,888	0/0:21,0:21:32.88:0,33,281	0/1:19,0:18:12.60:160,0,13	0/1:47,0:46:99:239,0,334	0/0:26,0:25:38.83:0,39,310	0/1:19,1:20:99:186,0,140	0/1:17,0:17:38.96:59,0,39	1/1:11,0:10:7.98:61,8,0
chr10	18770229	.	CA	C	5926.54	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=5.514;DP=605;FS=2.347;HRun=9;HaplotypeScore=71.2422;InbreedingCoeff=0.9660;MQ=75.20;MQ0=0;MQRankSum=1.510;QD=22.20;ReadPosRankSum=-0.906;VQSLOD=5.3409;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:28:69:0,69,762	0/0:14,0:14:36.09:0,36,405	0/0:25,0:23:18.98:0,19,207	0/0:20,1:19:14.66:0,15,187	0/0:21,1:22:2.29:0,2,506	1/1:1,23:24:57.03:522,57,0	1/1:5,19:24:54.02:494,54,0	1/1:3,13:16:39.01:357,39,0	0/0:19,0:18:48.14:0,48,554	0/0:29,0:30:78.05:0,78,870	0/0:17,0:17:32.23:0,32,448	1/1:3,20:23:54.03:494,54,0	0/0:20,0:20:54.16:0,54,623	0/0:18,0:18:42.07:0,42,462	1/1:3,24:27:63.03:577,63,0	1/1:2,22:24:60.03:549,60,0	0/0:27,1:28:47.76:0,48,803	1/1:4,23:27:63.03:577,63,0	1/1:2,17:19:51.01:463,51,0	1/1:3,27:30:75.02:686,75,0	1/1:2,3:5:14.99:132,15,0	1/1:4,22:27:68.07:610,68,0	0/0:22,0:22:51.10:0,51,564	0/0:23,1:24:26.65:0,27,544	1/1:1,20:21:51.03:467,51,0	0/0:18,1:19:26.65:0,27,546	0/0:22,0:22:54.15:0,54,613	0/0:8,0:8:18.05:0,18,208
chr10	18770305	.	G	GGAT	14211.25	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-4.747;DP=662;FS=0.666;HRun=0;HaplotypeScore=153.0582;InbreedingCoeff=0.9818;MQ=76.67;MQ0=0;MQRankSum=-9.066;QD=48.01;ReadPosRankSum=4.198;VQSLOD=6.4347;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,28:35:46.60:1700,47,0	1/1:2,6:8:18.06:386,18,0	0/0:25,0:23:42.41:0,42,551	0/0:30,0:28:33.99:0,34,882	1/1:7,21:30:60.21:1269,60,0	0/0:26,0:26:48.16:0,48,743	0/0:34,0:34:87.11:0,87,1225	0/0:22,0:22:54.16:0,54,778	1/1:5,14:18:45.05:916,45,0	1/1:6,22:28:69.14:1389,69,0	1/1:6,16:22:45.15:958,45,0	0/0:29,0:29:63.21:0,63,970	1/1:4,18:23:60.21:1276,60,0	1/1:1,14:15:39.13:831,39,0	0/0:21,0:20:54.18:0,54,834	0/0:26,0:26:54.05:0,54,767	1/1:4,15:19:27.25:882,27,0	0/0:32,0:32:84.24:0,84,1240	0/0:25,0:25:66.20:0,66,975	0/0:30,0:30:78.25:0,78,1194	0/0:27,0:27:45:0,45,649	0/0:16,0:16:42.14:0,42,647	1/1:4,17:21:48.16:1029,48,0	1/1:6,20:26:5.19:965,5,0	0/0:23,0:23:48.14:0,48,699	1/1:4,18:22:57.20:1194,57,0	1/1:1,17:17:42.14:899,42,0	1/1:1,9:10:24.55:516,25,0
chr10	18770349	.	A	AGAG	14218.35	PASS	AB=1.000;AC=38;AF=0.679;AN=56;BaseQRankSum=-5.532;DP=759;FS=4.413;HRun=0;HaplotypeScore=198.1592;InbreedingCoeff=-0.1464;MQ=56.73;MQ0=15;MQRankSum=3.168;QD=20.08;ReadPosRankSum=7.290;VQSLOD=3.7884;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:36,0:39:99:172,0,101	0/1:19,0:18:99:209,0,358	0/1:27,0:15:7.60:8,0,39	0/0:19,0:14:8.41:0,8,160	0/1:23,0:22:99:217,0,125	1/1:1,25:28:45.15:947,45,0	1/1:13,23:34:32.20:683,32,0	1/1:11,18:25:54.14:798,54,0	0/1:23,0:21:81.29:157,0,81	0/1:37,0:37:99:415,0,388	0/1:24,0:24:99:357,0,272	1/1:9,25:34:41.87:884,42,0	0/1:33,0:33:99:451,0,328	0/1:22,0:22:99:199,0,337	1/1:15,8:21:48.14:871,48,0	1/1:4,23:28:39.07:817,39,0	0/1:23,0:23:99:144,0,311	1/1:18,16:34:84.19:1557,84,0	1/1:9,12:20:36.12:701,36,0	1/1:2,25:28:75.20:1332,75,0	1/1:4,36:39:48.16:960,48,0	1/1:2,12:15:21:397,21,0	0/1:32,0:32:99:373,0,371	0/0:32,0:32:16.84:0,17,535	1/1:2,22:24:42.14:884,42,0	0/1:23,0:22:99:286,0,267	0/1:25,0:24:99:339,0,321	0/1:16,0:16:61.78:62,0,147
chr10	18770355	.	G	GGAGGAAGAA	8687.88	PASS	AB=0.994;AC=19;AF=0.339;AN=56;BaseQRankSum=6.496;DP=741;FS=12.018;HRun=0;HaplotypeScore=277.2497;InbreedingCoeff=-0.2144;MQ=53.31;MQ0=16;MQRankSum=-9.988;QD=19.75;ReadPosRankSum=-3.361;VQSLOD=2.3366;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:34,3:37:68.60:1674,69,0	0/1:17,0:17:99:322,0,558	0/0:23,0:7:8.18:0,8,122	0/0:19,0:12:15.23:0,15,326	0/1:24,0:23:87.49:436,0,87	0/0:28,0:28:40.31:0,40,159	0/0:33,0:31:27.10:0,27,112	0/1:35,0:30:35.90:36,0,376	1/1:13,9:22:39.12:1268,39,0	0/1:33,0:33:99:860,0,542	0/1:24,0:24:99:613,0,454	0/0:31,0:31:43.95:0,44,243	0/1:31,0:31:99:809,0,537	0/1:22,0:22:99:397,0,538	0/1:22,0:20:28.68:29,0,174	0/0:28,0:28:33.61:0,34,117	0/1:24,0:24:99:161,0,528	0/0:31,0:31:38.76:0,39,292	0/1:19,0:17:14.25:14,0,133	0/0:28,0:28:4.65:0,5,231	0/0:41,0:40:21.91:0,22,116	0/0:15,0:15:20.98:0,21,115	0/1:29,0:29:99:622,0,505	0/1:32,0:32:99:258,0,618	0/0:24,0:24:34.93:0,35,125	0/1:24,1:24:99:566,0,246	0/1:27,0:26:99:538,0,544	0/1:14,0:14:84.10:84,0,176
chr10	18770358	.	G	GGAA	11659.03	PASS	AB=0.876;AC=31;AF=0.554;AN=56;BaseQRankSum=1.617;DP=742;FS=6.969;HRun=0;HaplotypeScore=187.5372;InbreedingCoeff=-0.5152;MQ=52.12;MQ0=18;MQRankSum=0.612;QD=16.78;ReadPosRankSum=7.619;VQSLOD=3.5819;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:37,0:37:99:230,0,146	0/1:13,5:17:99:341,0,425	0/0:25,0:8:11.40:0,11,116	0/0:22,0:11:10.36:0,10,239	0/1:14,9:22:99:437,0,150	1/1:28,0:28:22.18:531,22,0	0/1:32,0:30:40.88:370,0,41	0/1:32,0:27:99:304,0,146	1/1:25,0:23:17.42:284,17,0	0/1:21,12:33:99:785,0,481	0/1:13,11:24:99:617,0,324	0/1:28,0:28:23.05:477,0,23	0/1:19,11:30:99:740,0,515	0/1:16,6:22:99:340,0,478	0/1:20,0:19:26.41:413,0,26	1/1:28,0:28:15.10:492,15,0	0/1:23,3:25:99:260,0,428	1/1:30,0:30:70.57:871,71,0	0/1:21,0:19:47.78:342,0,48	1/1:27,0:27:65.81:750,66,0	0/1:44,0:43:30.92:503,0,31	0/1:16,0:16:48.28:198,0,48	0/1:18,11:29:99:612,0,496	0/1:29,2:31:99:102,0,615	0/1:24,0:24:3.72:478,0,4	0/1:16,7:22:99:474,0,244	0/1:19,8:26:99:576,0,452	0/1:13,2:15:99:131,0,279
chr10	18771684	.	C	CTT	11718	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-0.760;DP=726;FS=5.022;HRun=8;HaplotypeScore=101.4860;InbreedingCoeff=0.9996;MQ=74.05;MQ0=0;MQRankSum=-1.849;QD=33.77;ReadPosRankSum=2.120;VQSLOD=4.6626;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,36:44:99:1507,100,0	1/1:3,8:13:24.04:341,24,0	0/0:26,0:24:48.12:0,48,530	0/0:22,0:19:39.07:0,39,425	1/1:4,21:27:58.87:789,59,0	0/0:21,0:21:57.14:0,57,635	0/0:23,0:23:60.13:0,60,659	0/0:27,0:27:51.07:0,51,553	1/1:3,20:24:48.16:762,48,0	1/1:2,16:18:46.95:692,47,0	1/1:1,12:14:30.10:476,30,0	0/0:30,0:30:90.23:0,90,994	1/1:0,24:28:64.68:916,65,0	1/1:1,23:24:60.20:952,60,0	0/0:28,0:28:75.18:0,75,827	0/0:36,1:37:51.60:0,52,1013	1/1:2,25:27:60.20:952,60,0	0/0:37,0:37:97.02:0,97,1082	0/0:26,0:26:63.16:0,63,702	0/0:27,0:27:63.13:0,63,693	0/0:24,0:24:63.16:0,63,702	0/0:19,0:19:54.13:0,54,602	1/1:5,18:23:42.14:661,42,0	1/1:0,27:28:72.25:1143,72,0	0/0:32,0:32:90.20:0,90,985	1/1:4,17:22:50.65:749,51,0	1/1:6,27:38:83.04:1146,83,0	1/1:2,15:17:41.93:632,42,0
chr10	18772284	.	ACATC	A	14362.08	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=15.477;DP=603;FS=2.337;HRun=0;HaplotypeScore=113.4737;InbreedingCoeff=0.9920;MQ=88.95;MQ0=1;MQRankSum=-6.987;QD=52.80;ReadPosRankSum=4.310;VQSLOD=6.1480;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,44:45:99:2449,117,0	1/1:0,6:6:12.04:252,12,0	0/0:22,0:22:63.19:0,63,1594	0/0:25,0:25:72.24:0,72,1977	1/1:0,9:9:18.06:324,18,0	0/0:19,0:19:57.20:0,57,1641	0/0:41,0:41:99:0,123,3439	0/0:28,0:28:84.27:0,84,2310	1/1:0,22:22:60.21:1258,60,0	1/1:0,24:24:72.21:1386,72,0	1/1:0,12:11:24.08:502,24,0	0/0:22,0:22:60.21:0,60,1684	1/1:0,13:13:30.10:628,30,0	1/1:0,26:25:69.24:1447,69,0	0/0:21,0:21:63.22:0,63,1817	0/0:26,0:26:78.25:0,78,2189	1/1:0,36:36:96:2012,96,0	0/0:21,0:21:63.22:0,63,1825	0/0:16,0:15:48.16:0,48,1387	0/0:18,0:18:54.19:0,54,1564	0/0:44,0:44:99:0,132,3792	0/0:15,0:15:45.14:0,45,1235	1/1:0,16:15:27.09:563,27,0	1/1:0,19:19:45.15:943,45,0	0/0:13,0:13:39.13:0,39,1130	1/1:0,17:17:48.14:966,48,0	1/1:0,22:22:63.22:1318,63,0	1/1:0,5:5:15.05:315,15,0
chr10	18772439	.	ATGGTGGTGG	A	211.37	PASS	AC=8;AF=0.500;AN=16;BaseQRankSum=-1.098;DP=235;FS=13.222;HRun=0;HaplotypeScore=63.2024;MQ=80.62;MQ0=7;MQRankSum=-0.470;QD=7.05;ReadPosRankSum=0.103;VQSLOD=0.3916;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	./.	./.	./.	./.	./.	1/1:11,2:13:6.02:132,6,0	./.	0/0:7,0:7:0:0,0,0	1/1:6,1:7:3.01:80,3,0	1/1:6,0:6:0.47:1,0,0	0/0:8,0:7:6.01:0,6,83	0/0:5,0:6:3.01:0,3,57	./.	0/0:11,0:11:6.02:0,6,175	./.	./.	./.	./.	./.	./.	./.	./.	./.	1/1:2,2:4:3.01:80,3,0
chr10	18773402	.	AAT	A	2483.63	PASS	AB=0.917;AC=27;AF=0.482;AN=56;BaseQRankSum=19.998;DP=904;FS=3.893;HRun=0;HaplotypeScore=171.9652;InbreedingCoeff=0.9382;MQ=80.23;MQ0=0;MQRankSum=-2.838;QD=5.14;ReadPosRankSum=4.368;VQSLOD=3.0985;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:60,0:60:83.10:352,83,0	0/1:10,1:11:7.91:80,0,8	0/0:26,0:26:78.17:0,78,1177	0/0:18,0:18:50.92:0,51,717	1/1:32,0:32:39.15:172,39,0	0/0:29,0:29:87.27:0,87,1568	0/0:29,0:29:87.30:0,87,1636	0/0:35,0:35:99:0,105,1848	1/1:44,0:44:68.90:199,69,0	1/1:38,0:38:83.03:368,83,0	1/1:27,0:27:49.62:153,50,0	0/0:39,0:39:99:0,117,2165	1/1:33,0:33:56.55:168,57,0	1/1:34,0:34:32.10:130,32,0	0/0:46,0:46:99:0,138,2529	0/0:38,0:38:99:0,108,1995	1/1:17,1:18:35.93:150,36,0	0/0:20,0:20:57.62:0,58,1029	0/0:22,0:22:66.20:0,66,1188	0/0:40,0:40:99:0,120,2160	0/0:20,0:20:60.19:0,60,1124	0/0:23,0:23:66.09:0,66,1142	1/1:28,0:28:28.15:124,28,0	1/1:57,0:57:85.67:249,86,0	0/0:36,0:36:99:0,108,1922	1/1:40,0:40:68.88:236,69,0	1/1:45,0:45:80.06:243,80,0	1/1:14,2:16:27.69:90,28,0
chr10	18773403	.	AT	A	17899.85	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=6.246;DP=896;FS=7.777;HRun=1;HaplotypeScore=98.9761;InbreedingCoeff=0.9990;MQ=79.86;MQ0=0;MQRankSum=-1.421;QD=37.29;ReadPosRankSum=3.175;VQSLOD=4.9309;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,51:60:99:2280,174,0	1/1:3,6:9:26.96:323,27,0	0/0:26,0:26:78.17:0,78,984	0/0:15,1:16:18.96:0,19,422	1/1:6,26:32:93.19:1247,93,0	0/0:30,0:30:90.23:0,90,1218	0/0:29,0:29:87.28:0,87,1249	0/0:33,0:33:99:0,99,1396	1/1:0,44:44:99:1502,108,0	1/1:11,28:39:99:1512,117,0	1/1:0,27:27:78.22:1059,78,0	0/0:40,0:40:99:0,120,1677	1/1:0,33:33:86.94:1210,87,0	1/1:0,32:32:84.28:1168,84,0	0/0:45,0:45:99:0,135,1905	0/0:36,1:37:69.48:0,69,1460	1/1:4,15:19:54.03:700,54,0	0/0:20,0:20:57.14:0,57,791	0/0:23,0:23:69.20:0,69,963	0/0:40,0:40:99:0,120,1671	0/0:20,0:20:60.19:0,60,858	0/0:22,0:22:60.74:0,61,859	1/1:3,24:27:69.95:1007,70,0	1/1:0,57:57:99:1988,144,0	0/0:35,0:35:99:0,105,1440	1/1:0,40:40:99:1612,120,0	1/1:0,45:45:99:1729,126,0	1/1:3,13:16:42.10:561,42,0
chr10	18773498	.	A	AAAT	25624.30	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-9.979;DP=855;FS=1.423;HRun=0;HaplotypeScore=158.8150;InbreedingCoeff=0.9938;MQ=80.56;MQ0=0;MQRankSum=-5.547;QD=58.10;ReadPosRankSum=3.570;VQSLOD=5.7910;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,33:41:99:2239,108,0	1/1:1,10:11:30.10:680,30,0	0/0:21,0:21:57.16:0,57,821	0/0:27,0:27:67.43:0,67,938	1/1:2,35:39:99:2159,108,0	0/0:32,0:32:93.30:0,93,1512	0/0:34,0:34:87.30:0,87,1440	0/0:30,0:30:87.29:0,87,1421	1/1:6,30:36:96.33:2169,96,0	1/1:4,31:36:99:2118,99,0	1/1:5,23:28:81.28:1761,81,0	0/0:35,0:35:99:0,105,1723	1/1:5,22:28:78.23:1675,78,0	1/1:8,25:33:93.32:2013,93,0	0/0:39,0:39:99:0,114,1877	0/0:25,1:26:10.26:0,10,1182	1/1:2,30:32:81.10:1835,81,0	0/0:13,0:13:36.09:0,36,547	0/0:31,0:31:87.29:0,87,1415	0/0:41,0:41:99:0,117,1918	0/0:34,0:34:99:0,99,1645	0/0:27,0:27:63.20:0,63,1019	1/1:2,29:33:81.26:1833,81,0	1/1:5,26:31:67.09:1372,67,0	0/0:24,0:24:69.22:0,69,1118	1/1:9,32:41:99:2573,120,0	1/1:3,25:30:84.29:1897,84,0	1/1:2,20:22:60.20:1301,60,0
chr10	18776104	.	AG	A	17055.02	PASS	AB=0.600;AC=53;AF=0.946;AN=56;BaseQRankSum=2.360;DP=475;FS=0.000;HRun=1;HaplotypeScore=298.1760;InbreedingCoeff=0.3901;MQ=36.97;MQ0=0;MQRankSum=-2.432;QD=35.98;ReadPosRankSum=2.390;VQSLOD=3.8013;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,21:20:54.18:748,54,0	1/1:1,14:15:39.13:542,39,0	0/1:1,2:3:30.11:75,0,30	0/0:1,0:1:3:0,3,25	1/1:0,20:20:30.10:415,30,0	1/1:0,12:11:30.10:416,30,0	1/1:0,22:21:57.19:790,57,0	1/1:0,21:21:63.21:876,63,0	1/1:0,17:17:51.17:707,51,0	1/1:0,29:29:84.25:1148,84,0	1/1:0,17:17:36.12:499,36,0	1/1:0,25:24:69.23:955,69,0	1/1:0,22:22:63.21:867,63,0	1/1:0,21:21:57.19:786,57,0	1/1:0,20:20:60.20:831,60,0	1/1:0,34:33:93.31:1290,93,0	1/1:0,11:11:33.11:458,33,0	1/1:0,7:7:21.07:292,21,0	1/1:0,12:12:36.12:497,36,0	1/1:0,22:22:45.15:624,45,0	1/1:0,18:17:27.08:374,27,0	1/1:0,29:29:75.25:1040,75,0	1/1:0,6:6:12.04:167,12,0	1/1:0,4:4:6.02:83,6,0	1/1:0,25:25:75.25:1034,75,0	1/1:0,16:16:48.16:665,48,0	1/1:0,23:23:57.19:791,57,0	1/1:0,2:2:6.02:83,6,0
chr10	18776108	.	CG	C	15266.91	PASS	AB=0.667;AC=53;AF=0.946;AN=56;BaseQRankSum=2.383;DP=478;FS=2.574;HRun=2;HaplotypeScore=305.9809;InbreedingCoeff=0.3915;MQ=38.77;MQ0=0;MQRankSum=-2.425;QD=32.01;ReadPosRankSum=2.281;VQSLOD=3.7245;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,20:20:54.09:653,54,0	1/1:0,15:15:39.04:464,39,0	0/1:2,2:4:21.81:69,0,22	0/0:1,0:1:3.01:0,3,34	1/1:1,19:20:30.10:384,30,0	1/1:0,12:11:30.05:367,30,0	1/1:3,20:22:54.17:693,54,0	1/1:1,20:21:60.19:772,60,0	1/1:0,17:17:51.16:655,51,0	1/1:0,29:29:84.16:1057,84,0	1/1:0,17:17:36.12:462,36,0	1/1:0,25:24:72.19:897,72,0	1/1:2,20:22:60.19:770,60,0	1/1:2,19:21:57.14:710,57,0	1/1:0,20:20:60.15:751,60,0	1/1:2,32:33:93.26:1175,93,0	1/1:0,11:11:33:385,33,0	1/1:0,7:7:21.03:251,21,0	1/1:2,10:12:30.06:368,30,0	1/1:3,20:23:45.02:536,45,0	1/1:4,14:17:26.98:309,27,0	1/1:1,28:29:75.24:963,75,0	1/1:0,6:6:12.04:154,12,0	1/1:1,3:4:6.02:76,6,0	1/1:0,25:25:75.24:958,75,0	1/1:1,15:16:45.15:579,45,0	1/1:1,22:23:57.18:733,57,0	1/1:0,2:2:6.02:77,6,0
chr10	18778086	.	T	TC	7771.14	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=13.922;DP=544;FS=29.616;HRun=1;HaplotypeScore=88.4735;InbreedingCoeff=0.9813;MQ=99.60;MQ0=0;MQRankSum=-9.082;QD=37.36;ReadPosRankSum=-1.299;VQSLOD=2.5178;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,22:28:69.23:1032,69,0	1/1:0,12:12:33.11:494,33,0	0/0:35,0:35:99:0,102,1312	0/0:27,0:27:80.61:0,81,990	1/1:2,14:16:42.13:604,42,0	0/0:20,0:20:60.20:0,60,779	0/0:16,0:16:48.16:0,48,623	0/0:27,0:27:81.26:0,81,1040	1/1:3,0:3:9.01:110,9,0	1/1:0,15:15:45.15:674,45,0	1/1:2,8:10:24.07:340,24,0	0/0:21,0:21:63.20:0,63,818	1/1:1,9:10:27.09:402,27,0	1/1:0,18:18:48.16:715,48,0	0/0:21,0:21:63.20:0,63,818	0/0:20,1:21:15.32:0,15,695	1/1:0,17:17:42.10:600,42,0	0/0:25,0:25:69.22:0,69,896	0/0:23,0:23:69.22:0,69,896	0/0:27,0:27:78.24:0,78,997	0/0:25,0:25:75.24:0,75,974	0/0:24,0:24:69.21:0,69,881	1/1:4,12:16:36.12:539,36,0	1/1:2,7:9:23.67:324,24,0	0/0:24,0:24:66.18:0,66,826	1/1:4,18:22:54.14:782,54,0	1/1:2,22:25:69.23:1022,69,0	1/1:0,7:7:9.03:135,9,0
chr10	18778102	.	T	TGGGG	7642.94	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=14.007;DP=570;FS=0.831;HRun=6;HaplotypeScore=164.0496;InbreedingCoeff=0.9801;MQ=97.08;MQ0=0;MQRankSum=-14.086;QD=34.12;ReadPosRankSum=-5.203;VQSLOD=0.2723;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:30:30.10:616,30,0	1/1:5,3:8:15.02:322,15,0	0/0:34,0:34:81.25:0,81,1303	0/0:29,0:29:60.17:0,60,936	1/1:12,3:15:18.04:376,18,0	0/0:22,0:22:63.20:0,63,995	0/0:16,0:16:42.13:0,42,680	0/0:27,0:27:75.25:0,75,1213	1/1:3,0:4:9.03:207,9,0	1/1:11,3:14:18.05:361,18,0	1/1:11,3:15:20.90:269,21,0	0/0:22,0:22:60.17:0,60,924	1/1:9,6:17:33.11:793,33,0	1/1:8,8:16:27.09:652,27,0	0/0:23,0:23:63.20:0,63,1018	0/0:18,0:18:51.15:0,51,801	1/1:8,7:16:29.95:660,30,0	0/0:24,0:24:66.22:0,66,1067	0/0:27,0:27:75.23:0,75,1190	0/0:29,0:29:81.27:0,81,1310	0/0:23,0:23:57.17:0,57,897	0/0:24,0:24:72.25:0,72,1165	1/1:10,6:16:24.08:552,24,0	1/1:5,3:9:15.05:319,15,0	0/0:28,0:28:78.26:0,78,1263	1/1:22,13:35:48.11:1192,48,0	1/1:13,10:24:42.14:1047,42,0	1/1:3,2:5:12.04:277,12,0
chr10	18778168	.	GAGAGGGAATCTCTAGGGTACCTCTCAC	G	15575.20	PASS	AB=0.950;AC=29;AF=0.518;AN=56;BaseQRankSum=13.283;DP=434;FS=10.224;HRun=0;HaplotypeScore=335.1354;InbreedingCoeff=0.8187;MQ=101.83;MQ0=0;MQRankSum=-12.917;QD=167.48;ReadPosRankSum=7.187;VQSLOD=3.1858;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,12:12:33.11:2353,33,0	1/1:0,4:4:12.04:869,12,0	0/0:22,0:21:60.21:0,60,3394	0/0:35,0:34:96.32:0,96,5828	1/1:0,2:2:3.01:223,3,0	0/0:27,0:27:81.28:0,81,8844	0/0:27,0:27:81.28:0,81,8523	0/0:31,0:31:93.31:0,93,8117	1/1:0,6:6:18.06:1341,18,0	1/1:0,9:9:27.09:2012,27,0	1/1:0,2:2:6.02:352,6,0	0/0:29,0:29:87.28:0,87,8974	1/1:0,6:6:18.06:1334,18,0	1/1:0,8:8:24.08:1787,24,0	0/0:20,0:20:60.18:0,60,6011	0/1:18,1:19:99:166,0,6393	1/1:0,1:1:3.01:224,3,0	0/0:21,0:21:63.22:0,63,7217	0/0:24,0:24:72.25:0,72,7828	0/0:26,0:26:78.25:0,78,7965	0/0:25,0:25:75.26:0,75,8659	0/0:24,0:24:72.25:0,72,7590	1/1:0,5:5:15.05:1087,15,0	1/1:0,2:2:6.02:447,6,0	0/0:30,0:30:90.31:0,90,8996	1/1:1,6:7:21.06:1368,21,0	1/1:0,8:8:24.08:1788,24,0	1/1:0,2:2:3.01:224,3,0
chr10	18778213	.	G	GC	5797.77	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=16.687;DP=531;FS=2.655;HRun=1;HaplotypeScore=181.4012;InbreedingCoeff=0.9832;MQ=94.61;MQ0=0;MQRankSum=-14.336;QD=32.03;ReadPosRankSum=3.627;VQSLOD=4.6156;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,21:23:39.51:513,40,0	1/1:0,10:10:15.05:224,15,0	0/0:27,0:27:81.26:0,81,1046	0/0:28,0:28:72.18:0,72,900	1/1:0,11:11:12.03:180,12,0	0/0:26,0:26:75.23:0,75,958	0/0:19,0:19:54.16:0,54,686	0/0:27,0:27:72.22:0,72,921	1/1:0,12:12:30.10:449,30,0	1/1:0,22:22:63.21:943,63,0	1/1:2,8:10:12.04:179,12,0	0/0:18,0:18:54.18:0,54,701	1/1:1,12:13:27.09:404,27,0	1/1:0,13:13:36.12:535,36,0	0/0:20,0:20:60.20:0,60,779	0/0:20,1:21:18.33:0,18,734	1/1:0,8:8:17.99:222,18,0	0/0:19,0:19:57.14:0,57,721	0/0:36,0:36:99:0,108,1363	0/0:24,0:24:69.21:0,69,879	0/0:39,0:39:99:0,108,1402	0/0:23,0:23:54.15:0,54,673	1/1:0,8:8:17.98:244,18,0	1/1:1,10:11:21:204,21,0	0/0:23,0:23:63.20:0,63,817	1/1:0,13:13:39.13:581,39,0	1/1:1,20:21:60.20:896,60,0	1/1:0,6:6:15.05:225,15,0
chr10	18778412	.	A	AT	11487.24	PASS	AB=0.991;AC=29;AF=0.518;AN=56;BaseQRankSum=-18.229;DP=648;FS=4.040;HRun=0;HaplotypeScore=151.6863;InbreedingCoeff=0.6028;MQ=71.33;MQ0=0;MQRankSum=2.714;QD=26.05;ReadPosRankSum=-3.714;VQSLOD=3.6218;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:50.07:0,50,210	0/0:14,0:14:25.66:0,26,79	0/0:10,0:10:26.05:0,26,282	0/0:16,0:16:31.88:0,32,383	0/1:19,0:19:12.70:13,0,52	1/1:1,29:30:72.24:1028,72,0	1/1:1,21:22:54.18:770,54,0	1/1:0,36:36:99:1351,105,0	0/1:22,0:22:47.77:71,0,48	0/1:32,0:32:17.69:18,0,79	0/0:19,0:19:16.19:0,16,81	1/1:0,25:25:72.24:1028,72,0	0/1:29,0:29:13.66:14,0,94	0/0:23,0:23:24.74:0,25,130	1/1:1,22:23:54.17:770,54,0	1/1:0,28:28:72.24:1028,72,0	0/0:21,0:21:1.27:0,1,92	1/1:0,20:20:54.06:723,54,0	1/1:1,26:27:78.16:989,78,0	1/1:1,24:25:69.17:959,69,0	1/1:0,25:25:66.14:915,66,0	1/1:1,31:32:77.80:1037,78,0	0/0:24,0:24:15.19:0,15,115	0/0:21,0:21:11.74:0,12,71	1/1:2,22:24:51.64:728,52,0	0/1:21,1:22:44.08:46,0,44	0/0:23,0:23:9.62:0,10,86	0/0:13,0:13:26.20:0,26,88
chr10	18778462	.	TTCCATCCATCCATCCA	T	7954.12	PASS	AB=0.987;AC=24;AF=0.480;AN=50;BaseQRankSum=-6.323;DP=627;FS=3.415;HRun=0;HaplotypeScore=333.2429;InbreedingCoeff=0.6569;MQ=57.73;MQ0=9;MQRankSum=0.833;QD=25.09;ReadPosRankSum=2.065;VQSLOD=2.7472;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:15:8.20:0,8,63	0/0:7,0:7:3.01:0,3,38	./.	./.	0/1:27,0:25:0:0,0,0	1/1:23,5:28:24.06:738,24,0	0/1:22,0:22:45.95:46,0,129	0/0:30,0:29:0:0,0,0	1/1:22,0:22:21.07:288,21,0	0/0:30,0:29:24.08:0,24,390	0/0:13,0:13:6.02:0,6,75	1/1:18,6:24:27.09:980,27,0	0/0:29,0:29:51.16:0,51,684	0/0:26,0:26:42.12:0,42,524	1/1:13,8:21:42.13:1513,42,0	1/1:18,0:21:9.03:276,9,0	0/0:18,0:18:15.05:0,15,191	0/1:17,0:18:89.68:106,0,90	1/1:14,3:16:12.04:450,12,0	1/1:22,8:29:33.10:1290,33,0	1/1:21,0:21:6.02:171,6,0	1/1:20,6:26:27.09:985,27,0	0/0:13,0:12:9.03:0,9,132	0/1:13,0:13:0:0,0,0	1/1:20,7:27:33.10:1109,33,0	0/0:22,0:20:18.06:0,18,254	0/0:15,0:15:12.04:0,12,175	./.
chr10	18778511	.	TCCA	T	132.24	PASS	AB=0.953;AC=5;AF=0.089;AN=56;BaseQRankSum=13.609;DP=600;FS=12.725;HRun=0;HaplotypeScore=171.0627;InbreedingCoeff=-0.1296;MQ=58.55;MQ0=24;MQRankSum=-11.467;QD=1.09;ReadPosRankSum=6.899;VQSLOD=1.4345;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,1:25:35.75:0,36,797	0/0:7,0:7:6.58:0,7,183	0/0:21,0:13:39.11:0,39,486	0/0:36,0:23:59.20:0,59,723	0/0:14,0:12:5.96:0,6,78	0/0:31,0:31:21.38:0,21,870	0/0:22,0:22:63.17:0,63,830	0/0:19,0:16:48.16:0,48,623	0/1:16,7:23:99:175,0,364	0/0:23,0:23:17.36:0,17,552	0/0:11,0:10:12.60:0,13,243	0/1:25,0:25:2.11:2,0,602	0/0:32,0:32:1.43:0,1,717	0/0:27,0:27:17.69:0,18,626	0/0:38,0:38:5.92:0,6,934	0/0:20,0:20:27.36:0,27,646	0/0:17,0:17:22.19:0,22,475	0/0:22,0:21:46.79:0,47,735	0/1:17,0:14:4.44:4,0,382	0/1:28,0:26:41.77:42,0,513	0/0:23,0:21:54.14:0,54,671	0/0:19,0:18:5.93:0,6,424	0/0:12,0:11:1.23:0,1,190	0/0:19,0:19:42.12:0,42,545	0/1:28,0:28:8.03:8,0,565	0/0:21,0:19:4.45:0,4,478	0/0:16,0:16:25.21:0,25,514	0/0:3,0:3:6.02:0,6,69
chr10	18778515	.	TCCA	T	493.16	PASS	AB=0.871;AC=13;AF=0.232;AN=56;BaseQRankSum=13.861;DP=599;FS=24.960;HRun=0;HaplotypeScore=162.4381;InbreedingCoeff=-0.2875;MQ=61.82;MQ0=20;MQRankSum=-11.195;QD=1.95;ReadPosRankSum=2.899;VQSLOD=1.1178;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:65.66:0,66,801	0/1:7,1:8:6.43:6,0,207	0/0:22,0:14:41.81:0,42,517	0/0:38,0:25:71.72:0,72,891	0/0:6,2:7:8.90:0,9,116	0/0:29,0:29:22.53:0,23,827	0/0:28,0:28:81.26:0,81,1081	0/0:20,0:18:54.18:0,54,701	0/1:14,0:21:45.95:46,0,379	0/1:18,4:22:54.46:54,0,492	0/1:12,1:12:17.22:17,0,246	0/0:25,0:25:8.13:0,8,648	0/1:22,9:31:99:219,0,517	0/1:16,7:23:99:131,0,405	0/0:35,0:35:9.18:0,9,883	0/0:20,0:20:27.75:0,28,633	0/1:14,4:18:28.30:28,0,363	0/0:24,0:23:51.51:0,52,789	0/1:15,0:14:0.43:0,0,375	0/1:29,0:27:26.07:26,0,576	0/0:25,0:23:60.12:0,60,749	0/0:22,0:21:15.81:0,16,495	0/1:9,2:10:30.95:31,0,174	0/0:20,1:21:51.15:0,51,654	0/1:24,0:24:2.45:2,0,545	0/1:18,5:22:62.47:62,0,568	0/1:13,2:15:12.31:12,0,408	0/0:3,0:3:5.51:0,6,48
chr10	18778519	.	TCCATC	T	1268.29	PASS	AB=0.914;AC=19;AF=0.339;AN=56;BaseQRankSum=14.570;DP=620;FS=24.091;HRun=0;HaplotypeScore=182.0245;InbreedingCoeff=-0.4852;MQ=67.48;MQ0=20;MQRankSum=-10.782;QD=3.33;ReadPosRankSum=2.769;VQSLOD=1.2631;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:75.62:0,76,512	0/1:7,1:8:17.67:18,0,103	0/0:27,0:19:57.19:0,57,792	0/0:40,0:27:81:0,81,1089	0/1:6,2:7:2.26:2,0,71	0/1:31,0:31:20.19:20,0,966	0/0:29,0:29:87.25:0,87,1238	0/0:22,0:20:60.20:0,60,847	0/1:22,0:22:99:255,0,175	0/1:19,4:23:99:144,0,254	0/1:14,1:14:24.98:25,0,124	0/1:24,0:24:47.52:48,0,692	0/1:18,9:27:99:235,0,234	0/1:13,7:20:99:131,0,206	0/1:35,0:35:78.97:79,0,916	0/0:22,0:22:13.54:0,14,755	0/1:13,4:17:31.51:32,0,190	0/0:24,0:23:44.36:0,44,881	0/1:14,0:13:32.96:33,0,385	0/1:31,0:29:97.70:98,0,710	0/0:25,0:23:56.71:0,57,804	0/1:23,0:22:20.16:20,0,565	0/1:10,2:11:56.14:56,0,115	0/0:20,1:21:50.20:0,50,361	0/1:25,0:25:67.05:67,0,610	0/1:21,5:25:99:110,0,268	0/1:13,2:15:51.14:51,0,179	0/1:5,0:5:2.98:3,0,68
chr10	18779130	.	ATT	A	6212.91	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-14.789;DP=564;FS=1.600;HRun=12;HaplotypeScore=87.5090;InbreedingCoeff=0.9172;MQ=70.67;MQ0=3;MQRankSum=0.867;QD=22.19;ReadPosRankSum=-0.083;VQSLOD=4.5444;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:24:50.86:0,51,200	0/0:2,0:9:14.85:0,15,52	0/0:11,0:8:11.94:0,12,118	0/0:16,0:15:25.21:0,25,194	0/0:6,0:23:25.59:0,26,163	1/1:3,13:16:39.09:397,39,0	1/1:5,21:28:68.56:664,69,0	1/1:5,23:29:65.81:640,66,0	0/0:3,0:19:34.93:0,35,123	0/0:9,0:23:37.53:0,38,133	0/0:0,0:19:42.42:0,42,149	1/1:4,16:21:41.80:479,42,0	0/0:2,0:12:22.46:0,22,79	0/0:5,0:17:22.97:0,23,115	1/1:0,15:15:42.01:427,42,0	1/1:2,25:27:60.13:610,60,0	0/0:5,1:19:10.94:0,11,153	1/1:1,16:18:38.56:430,39,0	1/1:5,14:19:32.74:375,33,0	1/1:3,29:32:69.04:702,69,0	1/1:3,19:22:51.11:519,51,0	1/1:5,24:29:62.80:622,63,0	0/0:4,0:19:7.51:0,8,92	0/0:2,1:14:2.94:0,3,91	1/1:3,17:21:35.79:347,36,0	0/0:2,0:19:37.92:0,38,145	0/0:5,1:19:0.44:0,0,82	0/0:1,0:19:42.42:0,42,149
chr10	18779782	.	G	GTTGTTTT	16361.37	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-1.234;DP=674;FS=9.086;HRun=0;HaplotypeScore=209.0772;InbreedingCoeff=0.9270;MQ=56.66;MQ0=3;MQRankSum=-3.525;QD=26.18;ReadPosRankSum=-1.597;VQSLOD=2.7706;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:40:68.52:646,69,0	1/1:12,0:12:21.83:502,22,0	0/0:32,0:12:25.68:0,26,284	0/0:15,0:10:14.28:0,14,186	1/1:36,0:36:58.14:791,58,0	1/1:31,0:31:53.76:937,54,0	1/1:25,0:25:53.45:544,53,0	1/1:37,0:35:89.30:1519,89,0	1/1:14,0:14:6.26:162,6,0	1/1:27,0:26:53.21:771,53,0	1/1:14,0:14:17.88:235,18,0	1/1:27,0:26:57.33:618,57,0	1/1:18,0:17:32.29:443,32,0	1/1:20,0:25:57.69:574,58,0	1/1:31,0:31:68.58:970,69,0	1/1:17,0:16:44.26:356,44,0	1/1:25,0:32:59.88:662,60,0	1/1:14,10:28:24.80:463,25,0	1/1:18,0:18:53.12:631,53,0	1/1:20,0:20:47.47:558,47,0	1/1:10,0:10:26.08:224,26,0	1/1:23,0:23:16.51:647,17,0	1/1:20,0:20:28.76:497,29,0	1/1:29,0:29:46.40:500,46,0	1/1:20,0:20:53.77:972,54,0	1/1:33,0:33:86.53:1129,87,0	1/1:26,0:26:65.86:777,66,0	1/1:12,0:12:27.14:232,27,0
chr10	18779784	.	T	TGTTT	9935.02	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-0.747;DP=664;FS=4.049;HRun=0;HaplotypeScore=178.5755;InbreedingCoeff=0.9087;MQ=53.89;MQ0=4;MQRankSum=-2.779;QD=16.18;ReadPosRankSum=-0.644;VQSLOD=4.5392;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:40,0:40:64.58:497,65,0	1/1:12,0:12:20.06:308,20,0	0/0:34,0:12:26.51:0,27,261	0/0:16,0:7:13.90:0,14,162	1/1:17,0:35:51.32:488,51,0	1/1:24,0:31:53.39:474,53,0	1/1:22,0:22:53.35:428,53,0	1/1:17,0:34:80.25:629,80,0	1/1:4,0:14:6.05:93,6,0	1/1:25,0:24:48.58:442,49,0	1/1:6,0:14:17.77:131,18,0	1/1:26,0:25:56.37:433,56,0	1/1:14,1:18:28.05:289,28,0	1/1:26,0:26:54.17:382,54,0	1/1:30,0:30:64.03:591,64,0	1/1:16,0:15:44.28:351,44,0	1/1:32,0:32:59.26:501,59,0	1/1:24,0:24:19.42:211,19,0	1/1:16,0:17:50.03:457,50,0	1/1:21,0:21:41.55:360,42,0	1/1:10,0:10:23.07:181,23,0	1/1:11,0:22:13.62:303,14,0	1/1:10,0:20:27.60:308,28,0	1/1:29,0:29:46.16:386,46,0	1/1:20,0:20:53.31:482,53,0	1/1:31,0:31:76.77:614,77,0	1/1:25,0:25:64.53:482,65,0	1/1:17,0:17:14.65:114,15,0
chr10	18781025	.	AGGG	A	5798.53	PASS	AB=1.000;AC=25;AF=0.446;AN=56;BaseQRankSum=-6.155;DP=419;FS=12.753;HRun=12;HaplotypeScore=64.8680;InbreedingCoeff=0.8290;MQ=61.96;MQ0=14;MQRankSum=2.655;QD=26.00;ReadPosRankSum=2.604;VQSLOD=2.3366;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:25:13.20:0,13,95	1/1:0,5:5:9.01:99,9,0	0/0:6,0:3:2.96:0,3,58	0/1:9,0:8:2.07:2,0,37	1/1:5,17:22:45.12:568,45,0	0/0:17,0:19:14.85:0,15,186	0/0:9,0:11:12.04:0,12,184	0/0:6,0:8:9.01:0,9,121	0/0:5,0:5:9.46:0,9,139	1/1:6,11:17:33.04:400,33,0	1/1:5,21:27:59.86:730,60,0	0/0:12,0:11:15.01:0,15,226	1/1:0,15:15:36.12:454,36,0	1/1:3,13:14:30.10:379,30,0	0/0:6,0:6:8.99:0,9,96	0/0:2,0:17:17.44:0,17,37	1/1:4,22:25:69.17:853,69,0	0/0:6,0:18:11.68:0,12,25	0/0:4,0:11:25.20:0,25,237	0/0:7,0:10:17.07:0,17,141	0/0:9,0:19:16.21:0,16,124	0/0:5,0:5:3.01:0,3,55	1/1:0,17:17:39.08:472,39,0	1/1:5,19:23:48.10:606,48,0	0/0:7,0:8:3.01:0,3,56	1/1:2,20:22:54.17:680,54,0	1/1:3,13:16:30.08:367,30,0	1/1:0,7:7:15.05:189,15,0
chr10	18781035	.	GGGT	G	2299.33	PASS	AB=1.000;AC=22;AF=0.393;AN=56;BaseQRankSum=2.013;DP=453;FS=13.801;HRun=0;HaplotypeScore=77.6326;InbreedingCoeff=0.6785;MQ=51.95;MQ0=38;MQRankSum=6.237;QD=9.74;ReadPosRankSum=8.423;VQSLOD=0.7273;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:19:26.02:0,26,198	0/1:10,0:9:7.60:28,0,8	0/0:4,0:1:3.01:0,3,67	0/1:7,0:6:2.09:2,0,25	1/1:22,1:23:25.14:220,25,0	0/0:19,0:18:32.66:0,33,334	0/0:17,0:12:17.96:0,18,234	0/0:14,0:11:26.87:0,27,276	0/0:8,0:6:14.96:0,15,199	0/1:15,0:14:20.38:164,0,20	1/1:23,1:24:47.14:331,47,0	0/0:11,0:8:14.99:0,15,241	1/1:18,0:16:18.07:218,18,0	1/1:15,1:14:20.72:172,21,0	0/0:6,0:5:11.94:0,12,136	0/0:18,0:18:41.40:0,41,188	1/1:25,2:24:64.15:399,64,0	0/0:24,0:18:26.54:0,27,205	0/0:19,0:16:41.52:0,42,388	0/0:13,0:10:28.48:0,28,246	0/0:22,0:17:23.57:0,24,214	0/0:9,0:6:8.95:0,9,107	1/1:20,0:18:35.21:183,35,0	1/1:24,0:19:44.48:233,44,0	0/0:10,0:6:5.98:0,6,86	1/1:22,1:22:12.18:286,12,0	1/1:16,1:16:28.59:187,29,0	0/1:12,0:9:18.33:83,0,18
chr10	18781107	.	C	CG	2605.56	PASS	AB=0.667;AC=23;AF=0.442;AN=52;BaseQRankSum=-7.679;DP=354;FS=5.580;HRun=1;HaplotypeScore=70.6846;InbreedingCoeff=0.7987;MQ=29.89;MQ0=32;MQRankSum=-1.925;QD=19.74;ReadPosRankSum=-0.109;VQSLOD=3.5610;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:19:30.08:0,30,371	0/0:13,0:12:12.04:0,12,142	./.	./.	0/0:22,0:18:30.01:0,30,327	1/1:4,9:12:9.06:328,9,0	1/1:5,12:14:18.06:261,18,0	1/1:6,15:17:48.08:663,48,0	0/0:10,0:8:17.75:0,18,207	0/0:10,0:9:27:0,27,305	0/0:21,0:20:36.52:0,37,362	1/1:2,6:7:14.84:188,15,0	0/0:12,0:11:15.01:0,15,144	0/0:13,0:10:12.04:0,12,153	1/1:1,2:3:2.94:18,3,0	0/1:2,2:4:9.88:101,0,10	0/0:15,0:9:12.02:0,12,138	1/1:10,3:7:17.98:214,18,0	1/1:12,12:19:45.02:594,45,0	1/1:3,4:7:14.98:189,15,0	1/1:7,2:6:8.89:80,9,0	1/1:2,3:3:9.03:125,9,0	0/0:20,0:19:24.02:0,24,266	0/0:12,0:6:8.97:0,9,93	1/1:4,4:5:3.01:44,3,0	0/0:21,0:19:36.11:0,36,445	0/0:12,0:11:8.98:0,9,85	0/0:9,0:5:9.03:0,9,116
chr10	18781133	.	AG	A	4256.26	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-1.163;DP=460;FS=9.460;HRun=1;HaplotypeScore=97.4822;InbreedingCoeff=0.6550;MQ=42.74;MQ0=21;MQRankSum=0.060;QD=9.54;ReadPosRankSum=-2.531;VQSLOD=1.0562;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:23,7:25:56.68:407,57,0	1/1:6,1:7:5.22:25,5,0	0/0:8,0:6:14.97:0,15,148	0/0:6,0:4:11.55:0,12,71	1/1:30,0:25:21.55:189,22,0	1/1:15,0:15:37.08:243,37,0	1/1:13,0:9:17.87:134,18,0	1/1:27,0:17:39.69:307,40,0	1/1:9,1:10:23.25:131,23,0	1/1:26,1:27:23.11:263,23,0	1/1:25,0:23:45.08:317,45,0	1/1:10,0:8:21.25:153,21,0	1/1:9,0:9:0.46:15,0,0	1/1:18,1:17:33.10:175,33,0	1/1:6,0:3:7.22:49,7,0	1/1:15,0:14:17.46:128,17,0	1/1:29,0:18:11.98:75,12,0	1/1:13,1:7:6.13:53,6,0	1/1:22,0:16:36.41:252,36,0	1/1:23,0:21:46.63:345,47,0	1/1:9,0:7:8.95:72,9,0	1/1:8,0:6:14.89:113,15,0	1/1:16,0:15:25.74:157,26,0	1/1:11,0:6:5.16:26,5,0	1/1:10,0:8:15.76:120,16,0	1/1:27,0:24:38.84:217,39,0	1/1:26,2:23:38.09:210,38,0	1/1:6,0:6:11.86:81,12,0
chr10	18781134	.	G	GA	5361.27	PASS	AB=1.000;AC=47;AF=0.839;AN=56;BaseQRankSum=-1.128;DP=460;FS=0.838;HRun=13;HaplotypeScore=93.8521;InbreedingCoeff=0.4739;MQ=43.35;MQ0=15;MQRankSum=-0.494;QD=12.53;ReadPosRankSum=1.942;VQSLOD=4.9206;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:25:3.57:24,0,4	1/1:3,4:7:12.04:157,12,0	0/0:8,0:6:15.05:0,15,179	0/0:6,0:4:7.41:0,7,80	1/1:22,8:25:13.44:502,13,0	1/1:15,0:15:8.43:65,8,0	1/1:13,0:9:3.16:25,3,0	1/1:29,0:19:0.40:1,0,0	1/1:11,0:11:1.38:10,1,0	1/1:20,7:27:29.08:779,29,0	1/1:14,11:23:44.39:571,44,0	1/1:10,0:8:3.87:20,4,0	1/1:1,10:11:12.04:161,12,0	1/1:13,6:17:34.75:412,35,0	1/1:6,0:3:3.47:26,3,0	1/1:15,0:14:19.58:121,20,0	1/1:17,10:18:45:564,45,0	1/1:14,0:7:2.84:9,3,0	1/1:22,0:16:13.54:74,14,0	1/1:22,0:21:9.16:126,9,0	1/1:9,0:7:1.33:2,1,0	0/0:8,0:6:0.24:0,0,2	1/1:9,6:15:23.02:389,23,0	1/1:7,3:6:5.96:45,6,0	0/0:10,0:8:1.65:0,2,4	1/1:20,7:24:37.62:584,38,0	1/1:17,11:24:40.41:653,40,0	1/1:4,2:6:3.01:41,3,0
chr10	18781513	.	TAGG	T	10650.43	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=14.593;DP=691;FS=1.332;HRun=0;HaplotypeScore=104.1333;InbreedingCoeff=0.9999;MQ=82.93;MQ0=2;MQRankSum=-4.207;QD=42.77;ReadPosRankSum=1.043;VQSLOD=6.0787;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,163,3693	0/0:15,0:15:45.15:0,45,1036	0/0:26,0:27:72.07:0,72,1524	0/0:20,0:20:60.21:0,60,1321	0/0:26,0:26:78.24:0,78,1678	1/1:1,24:25:66.23:1125,66,0	1/1:0,20:20:48.16:816,48,0	1/1:0,26:26:75.22:1197,75,0	0/0:23,0:22:63.21:0,63,1337	0/0:27,0:26:72.24:0,72,1535	0/0:24,0:24:66.23:0,66,1487	1/1:0,25:25:66.22:1124,66,0	0/0:30,0:30:87.29:0,87,1879	0/0:20,0:20:60.21:0,60,1384	1/1:3,25:27:69.24:1163,69,0	0/0:22,0:22:66.23:0,66,1522	0/0:31,0:31:93.29:0,93,2068	0/0:21,0:20:57.20:0,57,1286	1/1:0,14:14:42.13:690,42,0	1/1:0,36:36:99:1712,102,0	1/1:2,34:36:84.29:1419,84,0	1/1:2,16:17:42.14:690,42,0	0/0:20,0:20:57.20:0,57,1280	0/0:34,0:34:99:0,99,2229	1/1:3,18:21:42.14:715,42,0	0/0:18,0:18:48.16:0,48,1106	0/0:19,0:19:57.12:0,57,1117	0/0:10,0:10:30.10:0,30,692
chr10	18783569	.	AAGCTCCGGGC	A	9264.70	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=9.507;DP=418;FS=3.234;HRun=0;HaplotypeScore=196.4951;InbreedingCoeff=0.9673;MQ=75.60;MQ0=0;MQRankSum=-13.832;QD=65.71;ReadPosRankSum=2.029;VQSLOD=4.3735;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,141,6930	1/1:3,5:8:21.07:644,21,0	0/0:17,0:17:45.13:0,45,1573	0/0:13,0:13:15.38:0,15,1540	1/1:2,5:7:15.05:451,15,0	0/0:16,0:16:33.10:0,33,1438	0/0:25,0:25:60.20:0,60,2879	0/0:12,0:12:33.11:0,33,1659	0/0:8,0:8:18.06:0,18,933	1/1:7,10:17:42.14:1291,42,0	1/1:3,3:6:9.03:290,9,0	0/0:17,0:17:48.16:0,48,2234	1/1:1,6:7:18.06:580,18,0	1/1:5,8:13:24.08:773,24,0	0/0:11,0:11:30.09:0,30,1431	0/0:9,0:9:21.07:0,21,1010	1/1:9,10:19:33.11:966,33,0	0/0:25,0:25:69.24:0,69,3519	0/0:18,0:18:48.15:0,48,2275	0/0:9,0:9:27.09:0,27,1404	0/0:30,0:30:84.29:0,84,4148	0/0:8,0:8:18.06:0,18,936	1/1:2,8:10:24.08:773,24,0	1/1:4,13:17:30.10:934,30,0	0/0:10,0:10:27.09:0,27,1396	1/1:5,11:16:39.10:1113,39,0	1/1:3,14:17:42.03:1255,42,0	1/1:2,2:4:6.02:193,6,0
chr10	18784211	.	T	TTG	2190.43	PASS	AB=0.905;AC=36;AF=0.643;AN=56;BaseQRankSum=-4.743;DP=443;FS=1.667;HRun=0;HaplotypeScore=116.9969;InbreedingCoeff=0.2446;MQ=59.96;MQ0=13;MQRankSum=0.472;QD=6.98;ReadPosRankSum=-0.060;VQSLOD=3.1521;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:12,0:16:8.36:16,0,8	1/1:2,0:2:2.88:15,3,0	0/0:31,0:15:5.95:0,6,45	0/0:30,0:18:2.76:0,3,32	1/1:6,2:8:3.01:46,3,0	0/0:7,0:12:10.80:0,11,39	0/0:21,0:23:0.87:0,1,2	1/1:21,0:24:11.22:92,11,0	0/0:6,0:15:20.62:0,21,93	1/1:8,4:11:18.74:208,19,0	1/1:2,1:2:3.01:45,3,0	0/0:7,0:11:8.42:0,8,33	1/1:10,9:20:7.70:265,8,0	0/1:14,12:28:8.85:346,0,9	0/1:7,0:15:16.67:51,0,17	1/1:15,0:14:3.46:9,3,0	1/1:14,4:17:26.99:324,27,0	1/1:14,0:14:6.56:45,7,0	1/1:6,0:5:2.18:6,2,0	0/1:3,0:7:1.77:2,0,7	1/1:37,0:37:3.46:24,3,0	1/1:9,0:10:0.26:20,0,0	1/1:5,0:5:5.05:52,5,0	0/1:24,6:30:9.53:287,0,10	0/0:2,0:3:2.22:0,2,7	1/1:14,2:15:6.32:171,6,0	0/1:10,1:11:36.40:65,0,36	1/1:5,8:12:5.88:259,6,0
chr10	18784243	.	GTA	G	1252.13	PASS	AB=0.987;AC=28;AF=0.500;AN=56;BaseQRankSum=1.043;DP=474;FS=46.439;HRun=0;HaplotypeScore=168.3217;InbreedingCoeff=-0.3128;MQ=36.41;MQ0=24;MQRankSum=-2.391;QD=3.12;ReadPosRankSum=4.638;VQSLOD=1.2382;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:18:5.36:32,5,0	1/1:1,0:1:3.01:34,3,0	0/0:18,0:5:5.19:0,5,115	0/1:30,1:6:2.60:3,0,35	0/0:8,0:8:2.72:0,3,28	0/1:16,0:15:16.87:21,0,17	0/1:24,0:21:52.35:52,0,123	0/1:29,0:19:20.61:21,0,171	0/1:18,0:18:12.61:13,0,14	0/1:20,0:17:76.21:76,0,142	1/1:3,0:3:3.48:33,3,0	0/0:21,0:21:27.09:0,27,160	1/1:24,0:24:10.94:230,11,0	0/1:32,0:31:33.59:172,0,34	0/1:19,0:19:37.33:37,0,65	0/1:18,0:17:32.77:33,0,37	0/1:15,1:13:45.45:106,0,45	0/1:15,0:15:69.16:69,0,86	0/0:14,0:13:22.66:0,23,220	0/0:6,0:5:3.74:0,4,14	0/1:33,0:30:13.45:13,0,25	1/1:8,0:8:3.19:25,3,0	1/1:6,1:5:1.19:34,1,0	0/1:22,1:22:43.01:43,0,91	0/0:6,0:5:3.47:0,3,26	0/1:22,0:20:61.96:98,0,62	0/1:10,0:10:41.33:82,0,41	0/1:11,1:12:31.54:181,0,32
chr10	18784248	.	AGT	A	3469.69	PASS	AB=0.655;AC=49;AF=0.875;AN=56;BaseQRankSum=-0.469;DP=464;FS=13.088;HRun=0;HaplotypeScore=161.8987;InbreedingCoeff=0.2881;MQ=35.80;MQ0=23;MQRankSum=1.627;QD=8.36;ReadPosRankSum=4.135;VQSLOD=2.7467;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,0:19:5.10:28,5,0	1/1:2,0:2:2.92:17,3,0	0/0:22,0:6:10.99:0,11,110	0/0:27,0:6:0.39:0,0,64	0/1:4,0:10:0.19:0,0,0	1/1:7,8:15:15:182,15,0	1/1:8,15:21:20.78:256,21,0	1/1:11,16:17:30.05:348,30,0	1/1:7,0:18:19.25:89,19,0	1/1:14,0:17:14.55:135,15,0	1/1:0,0:2:3.31:15,3,0	1/1:4,17:21:35.22:438,35,0	1/1:10,1:24:18.75:203,19,0	1/1:10,0:29:10.93:62,11,0	1/1:5,14:19:34.15:375,34,0	0/1:6,11:16:4.59:91,0,5	1/1:9,0:11:3.30:71,3,0	1/1:11,4:15:7.31:239,7,0	1/1:7,8:14:7.06:256,7,0	1/1:2,2:4:9.03:107,9,0	1/1:11,21:29:5.17:73,5,0	1/1:4,4:8:2.73:36,3,0	1/1:6,0:5:2.63:18,3,0	0/1:14,0:21:4.36:28,0,4	1/1:0,6:5:5.69:73,6,0	1/1:11,0:20:30.58:159,31,0	1/1:7,0:10:13.27:68,13,0	1/1:7,0:12:15.68:101,16,0
chr10	18784263	.	GTGTA	G	2186.57	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=0.713;DP=508;FS=0.554;HRun=0;HaplotypeScore=202.2624;InbreedingCoeff=0.5995;MQ=38.77;MQ0=29;MQRankSum=-1.988;QD=10.27;ReadPosRankSum=1.946;VQSLOD=3.1422;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:25,2:24:5.96:78,6,0	1/1:3,0:3:2.99:24,3,0	0/0:29,0:9:23.39:0,23,331	0/0:37,0:8:16.86:0,17,204	0/0:11,1:12:3:0,3,26	0/0:15,0:15:14.13:0,14,74	0/0:23,0:21:21.16:0,21,149	0/0:28,0:18:40.33:0,40,347	1/1:16,3:19:20.05:267,20,0	1/1:15,2:15:36.87:429,37,0	1/1:4,0:3:3.01:41,3,0	0/0:30,0:30:36.22:0,36,220	1/1:25,1:26:15.77:393,16,0	1/1:32,0:31:2.77:157,3,0	0/0:21,0:21:9.09:0,9,111	0/0:18,0:17:10.35:0,10,75	1/1:13,0:10:18.49:190,18,0	0/0:15,0:15:29.62:0,30,222	0/0:13,0:11:32.61:0,33,235	0/0:5,0:5:7.21:0,7,27	0/0:32,0:27:8.34:0,8,65	0/0:9,0:9:2.07:0,2,8	0/1:11,0:8:16.25:16,0,18	1/1:20,0:19:3.80:77,4,0	0/0:7,0:6:4.32:0,4,27	0/1:20,0:19:8.59:331,0,9	0/1:12,0:12:1:172,0,1	1/1:9,0:9:18.02:200,18,0
chr10	18784265	.	GTA	G	1434.98	PASS	AB=0.986;AC=36;AF=0.643;AN=56;BaseQRankSum=0.929;DP=506;FS=8.164;HRun=0;HaplotypeScore=196.4887;InbreedingCoeff=-0.1679;MQ=39.02;MQ0=29;MQRankSum=0.233;QD=3.38;ReadPosRankSum=3.703;VQSLOD=1.8870;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:25:12.45:21,0,12	1/1:3,0:3:2.96:19,3,0	0/0:32,0:9:23.37:0,23,247	0/0:38,0:8:7.44:0,7,148	0/0:12,0:12:2.66:0,3,25	0/1:13,0:13:7.71:79,0,8	1/1:21,0:19:19.08:96,19,0	0/1:27,0:17:88.14:96,0,88	0/1:21,0:21:34.93:35,0,39	0/1:17,0:15:10.23:61,0,10	1/1:5,0:4:2.29:6,2,0	1/1:29,0:29:32.75:211,33,0	0/1:26,0:26:26.18:92,0,26	0/1:31,1:31:11.41:11,0,32	1/1:19,1:20:31.60:193,32,0	1/1:16,2:17:11.80:86,12,0	0/1:13,0:10:4.17:43,0,4	0/1:14,0:14:22.63:122,0,23	0/1:15,0:13:53.35:61,0,53	1/1:3,1:4:8.93:81,9,0	0/1:31,0:26:16.47:24,0,16	1/1:7,1:8:2.72:26,3,0	0/1:10,0:8:18.30:20,0,18	1/1:20,0:19:2.84:18,3,0	1/1:7,0:6:5.42:38,5,0	0/1:22,0:21:7.85:8,0,84	0/1:11,1:12:9.64:48,0,10	1/1:8,0:8:15.17:100,15,0
chr10	18784266	.	TATGA	T	1304.26	PASS	AB=0.988;AC=22;AF=0.393;AN=56;BaseQRankSum=1.456;DP=502;FS=6.184;HRun=0;HaplotypeScore=204.3131;InbreedingCoeff=0.1722;MQ=39.10;MQ0=28;MQRankSum=-2.641;QD=5.11;ReadPosRankSum=1.900;VQSLOD=1.5423;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:26,1:25:1.65:65,0,2	1/1:2,1:3:3.01:41,3,0	0/0:32,0:9:23.87:0,24,417	0/0:38,0:8:14.66:0,15,255	0/0:11,1:12:3.02:0,3,51	0/0:13,0:13:16.18:0,16,127	0/0:22,0:20:21.64:0,22,287	0/0:27,0:17:22.42:0,22,515	0/1:21,0:21:66.29:162,0,66	1/1:16,0:14:25.74:250,26,0	1/1:5,0:4:3:29,3,0	0/0:29,0:29:42.69:0,43,405	0/1:25,1:26:36.12:214,0,36	0/1:32,0:31:24.08:84,0,24	0/1:20,0:20:34.75:35,0,191	0/1:18,0:17:6.89:7,0,101	1/1:12,0:9:17.33:101,17,0	0/0:14,0:14:6.43:0,6,298	0/0:15,0:13:32.37:0,32,437	0/1:4,0:4:1.82:2,0,11	0/0:30,0:25:8.37:0,8,110	0/0:8,0:8:3:0,3,11	0/1:10,0:8:6.31:6,0,43	1/1:19,1:19:3.79:47,4,0	0/0:7,0:6:4.82:0,5,51	0/1:21,1:21:99:144,0,133	0/1:11,0:11:21.50:116,0,21	1/1:8,0:8:17.60:171,18,0
chr10	18784294	.	TGAGAGAGAGA	T	2838.18	PASS	AB=0.914;AC=27;AF=0.614;AN=44;BaseQRankSum=1.561;DP=418;FS=2.458;HRun=0;HaplotypeScore=204.5219;InbreedingCoeff=0.2066;MQ=38.74;MQ0=23;MQRankSum=-2.198;QD=9.79;ReadPosRankSum=0.637;VQSLOD=2.8319;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:23:5.11:0,5,45	./.	./.	./.	0/1:10,2:12:0:1,0,0	0/0:12,0:12:1.81:0,2,5	0/1:19,0:16:9.30:33,0,9	0/1:18,0:17:6.64:7,0,27	0/1:17,0:21:65.33:65,0,67	1/1:17,2:19:24.05:424,24,0	0/1:6,0:4:0:0,0,0	1/1:26,0:26:10.47:177,10,0	1/1:12,4:17:28.57:422,29,0	0/1:21,9:31:5.19:399,0,5	1/1:20,0:20:5.84:66,6,0	1/1:14,0:13:14.88:127,15,0	1/1:13,2:12:15.03:324,15,0	1/1:9,0:9:2.50:9,2,0	0/1:13,0:12:25.02:61,0,25	./.	0/0:24,0:19:0.89:0,1,5	./.	0/1:7,1:8:0:0,0,0	0/0:17,3:17:0:0,0,0	0/1:5,0:5:0:0,0,0	1/1:17,5:22:20.63:537,21,0	1/1:3,3:8:15.05:302,15,0	./.
chr10	18784306	.	AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGGGAGG	A	2144.35	PASS	AB=1.000;AC=22;AF=0.478;AN=46;BaseQRankSum=-1.138;DP=410;FS=0.936;HRun=0;HaplotypeScore=270.9786;InbreedingCoeff=0.5194;MQ=35.25;MQ0=35;MQRankSum=-0.235;QD=10.83;ReadPosRankSum=2.708;VQSLOD=2.4479;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:20:5.78:0,6,161	./.	./.	./.	0/1:12,0:11:0:1,0,0	1/1:15,0:15:2.98:46,3,0	1/1:19,0:16:9.01:116,9,0	0/1:12,0:11:2.95:52,0,3	0/1:20,0:19:20.03:20,0,252	0/0:15,0:15:26.54:0,27,916	0/1:6,0:4:0:0,0,0	1/1:22,2:24:20.80:788,21,0	0/0:19,0:18:27.75:0,28,676	0/0:30,0:28:32.72:0,33,893	1/1:8,14:22:12.04:690,12,0	1/1:13,0:11:4.89:221,5,0	0/0:23,0:17:32.52:0,33,1112	1/1:8,0:7:2.84:14,3,0	1/1:12,1:7:6.70:292,7,0	./.	1/1:21,0:16:3.01:51,3,0	./.	0/1:8,0:8:0:0,0,0	0/0:22,0:19:2.03:0,2,6	0/1:5,0:5:0:0,0,0	0/0:19,0:19:30.10:0,30,1274	0/0:9,0:9:18.06:0,18,608	0/0:36,0:1:3.01:0,3,159
chr10	18784316	.	AGAGAGAGAGAGAGAGAGAGGGAGG	A	1144.67	PASS	AB=1.000;AC=18;AF=0.450;AN=40;BaseQRankSum=4.214;DP=415;FS=10.579;HRun=0;HaplotypeScore=219.6280;InbreedingCoeff=0.4806;MQ=34.52;MQ0=46;MQRankSum=-2.075;QD=7.24;ReadPosRankSum=2.145;VQSLOD=1.4671;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:24:1.55:4,2,0	./.	./.	0/0:8,0:1:1.55:0,2,4	0/1:11,0:10:0:0,0,0	./.	./.	1/1:9,0:8:0.88:2,1,0	0/1:18,0:18:23.37:169,0,23	0/0:16,0:16:26.44:0,26,421	./.	1/1:18,0:18:9.02:401,9,0	0/0:21,0:20:9.86:0,10,168	0/0:33,0:31:13.73:0,14,203	1/1:20,0:20:9.03:370,9,0	1/1:12,0:10:3.01:146,3,0	0/0:23,0:17:25.18:0,25,408	./.	1/1:14,0:6:3.48:170,3,0	./.	1/1:20,0:15:0.47:1,0,0	./.	0/1:6,0:6:0:0,0,0	0/0:19,0:16:3.59:0,4,43	0/1:4,0:4:0:0,0,0	0/0:20,0:20:21.49:0,21,599	0/0:12,0:12:18.67:0,19,215	0/0:55,0:1:3.01:0,3,80
chr10	18784325	.	GAGAGAGAGA	G	1170.30	PASS	AB=0.962;AC=15;AF=0.313;AN=48;BaseQRankSum=6.748;DP=388;FS=14.227;HRun=0;HaplotypeScore=141.1235;InbreedingCoeff=-0.1863;MQ=37.05;MQ0=46;MQRankSum=-3.797;QD=5.82;ReadPosRankSum=6.018;VQSLOD=1.4661;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:23:5.47:0,5,85	./.	0/0:6,0:1:3:0,3,25	0/0:24,0:6:15:0,15,155	0/1:8,0:7:0:0,0,0	0/0:13,0:13:2.74:0,3,12	0/0:10,0:7:2.02:0,2,19	0/0:8,0:8:16.22:0,16,112	0/1:19,0:19:35.41:35,0,175	0/1:14,0:14:99:155,0,159	./.	0/1:14,0:14:10.69:79,0,11	0/1:20,2:21:60.33:140,0,60	0/1:27,1:26:99:175,0,158	0/1:19,0:18:7.03:39,0,7	1/1:9,0:7:14.88:120,15,0	0/1:22,0:17:99:127,0,159	0/0:4,0:1:2.60:0,3,10	0/1:11,0:4:22.16:55,0,22	./.	0/0:13,0:8:2.96:0,3,19	./.	0/1:2,1:3:0:0,0,0	0/0:18,0:17:2.10:0,2,36	0/1:3,0:3:0:0,0,0	0/1:16,0:17:99:249,0,227	0/1:11,1:12:87.38:123,0,87	0/0:56,0:2:6.02:0,6,71
chr10	18784334	.	AGGGAGG	A	1939.02	PASS	AB=1.000;AC=25;AF=0.568;AN=44;BaseQRankSum=1.792;DP=414;FS=50.320;HRun=0;HaplotypeScore=127.8577;InbreedingCoeff=-0.0007;MQ=47.41;MQ0=44;MQRankSum=-3.261;QD=6.64;ReadPosRankSum=1.342;VQSLOD=0.2686;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:21:1.72:0,2,4	./.	0/1:23,0:8:16.92:17,0,92	0/1:35,0:12:20.13:20,0,106	0/1:4,0:4:0:0,0,0	0/1:11,0:11:0:0,0,0	./.	1/1:0,13:13:38.69:417,39,0	0/1:20,0:20:7.89:82,0,8	0/1:14,0:14:64.44:150,0,64	./.	1/1:16,0:16:17.99:237,18,0	0/1:23,0:22:25.74:144,0,26	1/1:25,0:23:8.57:133,9,0	1/1:15,0:14:9.03:108,9,0	1/1:6,0:4:3:35,3,0	0/1:23,0:18:78.68:79,0,90	0/0:4,0:1:2.88:0,3,15	1/1:14,0:7:18.94:247,19,0	./.	1/1:16,0:12:3.01:47,3,0	./.	0/1:3,0:3:0:0,0,0	0/0:20,0:19:6.59:0,7,33	./.	0/1:18,0:18:49.37:249,0,49	0/1:12,0:12:21.34:108,0,21	0/0:57,0:4:8.92:0,9,80
chr10	18784340	.	GGA	G	1781.28	PASS	AB=0.916;AC=29;AF=0.630;AN=46;BaseQRankSum=-0.941;DP=384;FS=1.791;HRun=0;HaplotypeScore=112.5424;InbreedingCoeff=0.2882;MQ=57.95;MQ0=23;MQRankSum=-1.829;QD=6.27;ReadPosRankSum=5.766;VQSLOD=3.1389;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,0:19:5.93:40,6,0	1/1:1,0:1:3:25,3,0	0/1:32,0:14:2.30:2,0,166	0/0:43,0:16:29.57:0,30,235	0/1:4,0:4:0:0,0,0	./.	0/0:12,0:9:2.99:0,3,24	0/0:14,0:14:19.75:0,20,195	1/1:4,0:18:17.78:128,18,0	1/1:4,9:13:24.07:289,24,0	./.	0/1:10,0:10:6.84:7,0,14	1/1:9,13:22:18.70:189,19,0	1/1:8,14:21:23.70:248,24,0	0/1:15,0:14:0:0,0,0	0/1:12,0:10:8.26:8,0,54	1/1:6,15:18:27.08:320,27,0	0/1:4,0:2:15.95:22,0,16	0/1:9,0:7:8.50:9,0,14	./.	0/0:18,0:13:1.02:0,1,22	./.	0/1:1,2:3:0:0,0,0	1/1:7,11:17:5.63:72,6,0	./.	1/1:7,11:18:33.10:396,33,0	0/1:5,5:11:4.34:130,0,4	1/1:26,3:6:3.01:36,3,0
chr10	18784668	.	C	CTCTCTCTCTGTGTG	4017.86	PASS	AB=1.000;AC=27;AF=0.519;AN=52;BaseQRankSum=-3.238;DP=492;FS=28.794;HRun=0;HaplotypeScore=193.7092;InbreedingCoeff=-0.0995;MQ=42.38;MQ0=14;MQRankSum=-3.339;QD=11.25;ReadPosRankSum=-2.201;VQSLOD=1.1568;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:21,0:20:99:123,0,105	1/1:3,0:3:3.01:72,3,0	0/0:24,0:6:9.09:0,9,41	0/0:28,0:13:19.01:0,19,246	0/0:11,0:11:18.53:0,19,242	./.	1/1:23,0:18:8.99:115,9,0	0/1:28,0:28:62.17:495,0,62	0/1:24,0:23:99:238,0,364	0/1:11,0:11:99:167,0,172	0/0:10,0:9:6.86:0,7,85	1/1:18,0:19:8.88:131,9,0	0/1:13,0:13:99:224,0,172	0/1:15,0:15:99:195,0,188	1/1:10,0:16:2.74:22,3,0	1/1:16,0:24:26.98:521,27,0	0/1:23,0:21:99:276,0,302	1/1:4,12:20:12.04:444,12,0	0/1:17,0:17:18.84:179,0,19	0/0:8,0:8:0.47:0,0,1	0/1:17,0:16:21.57:22,0,23	1/1:15,0:15:0.47:1,0,0	0/1:13,0:12:0.34:0,0,0	0/0:28,0:26:15.51:0,16,251	./.	0/1:15,0:15:99:297,0,182	0/1:26,0:25:99:377,0,352	0/1:11,0:8:85.23:118,0,85
chr10	18784672	.	A	ATGTG	485.62	PASS	AB=0.904;AC=22;AF=0.423;AN=52;BaseQRankSum=0.384;DP=436;FS=5.070;HRun=0;HaplotypeScore=126.1657;InbreedingCoeff=0.2294;MQ=45.42;MQ0=15;MQRankSum=-2.891;QD=1.89;ReadPosRankSum=-2.490;VQSLOD=1.6723;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:11.70:0,12,141	./.	0/1:29,0:6:0.28:0,0,18	0/0:31,0:14:10.68:0,11,203	0/0:10,0:10:18.53:0,19,213	./.	1/1:4,4:15:3.01:58,3,0	0/1:13,0:17:19.24:149,0,19	0/1:23,0:22:38.73:39,0,277	0/0:11,0:11:17.95:0,18,196	0/0:8,0:8:6.01:0,6,64	1/1:3,1:15:10.37:46,10,0	0/1:9,0:9:14.79:15,0,141	0/0:14,0:14:14.92:0,15,182	1/1:10,0:10:1.69:5,2,0	0/1:21,0:20:0:0,0,0	0/1:24,0:22:1.07:1,0,272	0/1:15,0:15:0.27:25,0,0	1/1:9,0:16:26.95:234,27,0	0/1:4,0:7:0:0,0,0	0/1:3,0:14:10.28:10,0,31	1/1:3,2:17:2.35:8,2,0	0/0:3,0:11:0:0,0,0	0/0:25,0:24:22.26:0,22,234	1/1:11,0:11:2.90:16,3,0	0/0:16,0:14:2.01:0,2,165	0/0:16,0:15:32.88:0,33,358	0/1:8,0:7:22.34:22,0,65
chr10	18793059	.	A	AGAG	4351.49	PASS	AB=0.955;AC=43;AF=0.768;AN=56;BaseQRankSum=1.939;DP=427;FS=9.128;HRun=0;HaplotypeScore=353.2302;InbreedingCoeff=0.2355;MQ=34.73;MQ0=8;MQRankSum=0.815;QD=11.54;ReadPosRankSum=-2.223;VQSLOD=2.9905;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:12,2:14:13.02:76,0,13	1/1:17,1:16:11.06:187,11,0	0/0:27,0:4:2.80:0,3,20	0/0:15,0:2:2.68:0,3,11	1/1:21,0:21:38.02:295,38,0	1/1:17,0:17:33.59:283,34,0	1/1:5,0:5:8.97:88,9,0	1/1:2,0:2:4.22:24,4,0	1/1:13,0:13:10.36:101,10,0	1/1:34,2:36:31.17:476,31,0	1/1:38,0:37:74.45:527,74,0	1/1:6,0:6:14.84:111,15,0	0/1:14,0:14:14.15:80,0,14	1/1:14,0:14:14.31:130,14,0	1/1:7,0:6:11.87:94,12,0	0/1:8,1:8:0.53:72,0,1	0/1:7,0:7:8.51:42,0,9	0/0:3,0:3:1.23:0,1,3	0/0:2,0:2:0.88:0,1,2	1/1:18,0:18:13.02:98,13,0	1/1:2,0:2:1.80:15,2,0	1/1:20,0:20:40.34:288,40,0	1/1:31,1:32:25.82:325,26,0	1/1:7,0:7:7.08:95,7,0	1/1:19,0:19:20.03:221,20,0	1/1:33,0:31:54.05:520,54,0	0/1:14,0:13:6.54:45,0,7	1/1:11,0:11:19.23:160,19,0
chr10	18793090	.	G	GAAA	3530.34	PASS	AB=0.948;AC=20;AF=0.370;AN=54;BaseQRankSum=5.341;DP=365;FS=96.367;HRun=1;HaplotypeScore=262.7002;InbreedingCoeff=-0.3677;MQ=41.57;MQ0=4;MQRankSum=-0.017;QD=12.09;ReadPosRankSum=-1.163;VQSLOD=0.0627;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:8,1:9:41.01:41,0,125	0/1:9,4:13:13.09:320,0,13	0/0:22,0:7:14.41:0,14,215	0/0:9,0:3:8.24:0,8,100	0/1:18,1:18:25.81:188,0,26	1/1:12,0:12:1.92:215,2,0	0/1:6,0:6:7.96:8,0,94	0/0:5,0:5:10.84:0,11,110	0/1:13,0:13:14.46:14,0,156	0/1:26,2:28:89.68:302,0,90	0/1:27,1:26:48.54:468,0,49	0/0:3,0:3:6.01:0,6,64	0/1:13,1:14:69.13:113,0,69	0/1:18,0:18:97.29:109,0,97	0/0:11,0:10:5.82:0,6,48	0/1:4,0:4:44.44:51,0,44	0/1:10,0:10:29.55:30,0,165	./.	0/0:4,0:4:11.79:0,12,97	0/1:13,0:12:2.52:70,0,3	0/0:8,0:8:1.72:0,2,4	0/1:16,0:15:1.50:279,0,2	0/1:23,3:25:8.01:445,0,8	0/0:9,0:9:8.97:0,9,78	0/1:16,0:15:0.56:338,0,1	0/1:23,3:24:99:188,0,203	0/1:8,1:9:45.93:263,0,46	0/1:11,1:12:79.58:86,0,80
chr10	18793091	.	ATGT	A	4470.38	PASS	AB=1.000;AC=51;AF=0.944;AN=54;BaseQRankSum=1.133;DP=307;FS=1.436;HRun=0;HaplotypeScore=198.8396;InbreedingCoeff=0.4297;MQ=43.76;MQ0=4;MQRankSum=0.394;QD=15.69;ReadPosRankSum=1.847;VQSLOD=4.6527;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,5:7:18.04:229,18,0	1/1:6,4:12:18.03:147,18,0	0/0:21,0:7:14.35:0,14,202	0/1:10,0:3:5.14:5,0,83	1/1:3,7:15:10.02:84,10,0	1/1:7,1:11:25.03:163,25,0	1/1:4,1:5:11.83:87,12,0	1/1:3,1:4:11.93:98,12,0	1/1:2,6:9:24.06:351,24,0	1/1:7,4:21:38.91:379,39,0	1/1:10,6:24:55.18:473,55,0	1/1:3,0:3:2.87:36,3,0	1/1:1,4:11:9.03:130,9,0	1/1:1,4:14:15.92:188,16,0	1/1:8,3:10:8.77:96,9,0	1/1:1,1:3:8.24:80,8,0	1/1:0,7:7:18.04:225,18,0	./.	1/1:2,2:4:12.01:140,12,0	1/1:5,2:7:6.95:42,7,0	1/1:3,5:8:2.67:15,3,0	1/1:12,0:12:23.72:158,24,0	1/1:7,8:19:32.90:222,33,0	1/1:3,5:8:5.78:53,6,0	1/1:10,2:13:26.71:190,27,0	1/1:10,2:22:41.56:425,42,0	1/1:4,3:7:14.84:158,15,0	1/1:7,2:11:29.34:297,29,0
chr10	18793097	.	AT	A	6439.66	PASS	AB=0.604;AC=52;AF=0.929;AN=56;BaseQRankSum=0.457;DP=316;FS=6.069;HRun=1;HaplotypeScore=175.5727;InbreedingCoeff=0.3793;MQ=47.29;MQ0=3;MQRankSum=-3.324;QD=20.84;ReadPosRankSum=0.185;VQSLOD=4.5420;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,11:11:18.06:231,18,0	1/1:2,10:12:30.05:368,30,0	0/1:10,6:8:38.81:51,0,39	0/0:5,2:2:4.81:0,5,28	1/1:7,9:15:10.26:92,10,0	1/1:3,8:11:26.62:290,27,0	1/1:1,8:9:15.03:204,15,0	1/1:0,4:4:12.04:156,12,0	1/1:1,10:11:24.07:293,24,0	1/1:10,10:20:44.31:529,44,0	1/1:9,18:26:54.18:585,54,0	1/1:0,3:3:7.27:82,7,0	1/1:6,5:11:9.03:107,9,0	1/1:9,4:13:14.94:173,15,0	1/1:0,11:10:14.70:149,15,0	1/1:2,2:4:9.02:109,9,0	1/1:2,7:9:21.52:254,22,0	1/1:0,1:1:3.01:38,3,0	1/1:0,5:5:15.03:188,15,0	1/1:1,7:8:10.73:107,11,0	0/1:0,8:8:0.01:0,0,0	1/1:3,11:13:27.49:316,27,0	1/1:5,15:19:29.16:321,29,0	1/1:0,9:9:9.03:124,9,0	1/1:2,12:13:38.86:457,39,0	1/1:12,10:21:54.10:642,54,0	1/1:0,7:7:18:207,18,0	1/1:3,8:11:30.09:367,30,0
chr10	18793115	.	G	GA	633.54	PASS	AB=0.909;AC=8;AF=0.143;AN=56;BaseQRankSum=9.489;DP=417;FS=3.191;HRun=1;HaplotypeScore=166.7345;InbreedingCoeff=-0.1942;MQ=56.86;MQ0=3;MQRankSum=-5.905;QD=4.09;ReadPosRankSum=-2.806;VQSLOD=-0.6198;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:30.02:0,30,359	0/1:18,0:18:86.57:87,0,261	0/0:14,0:12:35.92:0,36,404	0/0:10,0:8:5.59:0,6,163	0/0:17,0:16:5.85:0,6,78	0/1:11,2:13:17.48:17,0,243	0/0:14,0:14:33.05:0,33,401	0/0:13,0:13:36.11:0,36,455	0/0:14,0:14:30.08:0,30,357	0/1:21,1:22:99:111,0,424	0/1:22,2:24:96.37:96,0,115	0/0:7,0:7:18.05:0,18,221	0/0:14,0:14:18.03:0,18,220	0/0:14,0:14:27.08:0,27,343	0/0:18,0:18:22.49:0,22,418	0/0:10,0:10:1.83:0,2,274	0/0:10,0:10:6.13:0,6,270	0/0:6,0:6:18.04:0,18,217	0/0:12,0:12:30.09:0,30,366	0/0:11,0:9:18:0,18,212	0/0:16,0:16:27.09:0,27,349	0/0:19,1:19:15.94:0,16,279	0/1:17,3:19:52.17:52,0,62	0/0:15,0:15:22.99:0,23,281	0/1:8,4:11:58.38:58,0,63	0/1:30,0:28:99:199,0,472	0/0:10,0:10:24.03:0,24,276	0/1:14,1:15:99:146,0,232
chr10	18796576	.	C	CTTCA	24870.65	PASS	AB=0.634;AC=43;AF=0.768;AN=56;BaseQRankSum=-11.052;DP=771;FS=6.858;HRun=0;HaplotypeScore=109.1843;InbreedingCoeff=0.5604;MQ=74.33;MQ0=1;MQRankSum=0.465;QD=37.57;ReadPosRankSum=-1.646;VQSLOD=4.3437;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:44:90.10:0,90,839	1/1:4,10:14:21.07:507,21,0	0/0:22,0:20:12.04:0,12,194	0/0:18,0:17:14.97:0,15,211	1/1:9,17:27:17.75:1319,18,0	1/1:5,12:17:30.10:725,30,0	1/1:11,18:30:27.09:653,27,0	0/1:22,6:32:5.39:720,0,5	0/0:8,0:25:36.03:0,36,331	1/1:11,27:39:87.29:1982,87,0	0/1:7,12:20:2.85:826,0,3	0/1:10,19:29:3.32:966,0,3	1/1:13,19:33:63.17:1436,63,0	1/1:11,19:30:57.20:1336,57,0	1/1:15,18:36:42.14:1011,42,0	1/1:7,15:22:36.12:851,36,0	1/1:14,12:27:33.11:797,33,0	1/1:8,9:17:24.08:580,24,0	1/1:16,11:28:36.11:796,36,0	1/1:4,23:27:72.25:1664,72,0	1/1:16,27:43:63.22:1513,63,0	1/1:14,20:35:63.21:1413,63,0	1/1:5,13:18:30.10:671,30,0	1/1:7,26:33:5.73:1184,6,0	0/1:4,17:21:3.32:970,0,3	1/1:14,23:38:75.26:1753,75,0	1/1:17,19:36:39.13:922,39,0	0/1:4,5:9:33.42:275,0,33
chr10	18798166	.	AGAGGATG	A	9450.19	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=14.264;DP=517;FS=1.233;HRun=0;HaplotypeScore=132.7313;InbreedingCoeff=0.9924;MQ=83.68;MQ0=0;MQRankSum=-14.970;QD=53.39;ReadPosRankSum=3.548;VQSLOD=5.0933;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:66.22:0,66,2464	1/1:1,8:9:21.07:545,21,0	0/0:24,0:24:69.22:0,69,2421	0/0:22,0:22:56.78:0,57,2079	1/1:4,12:16:33.07:796,33,0	0/0:16,0:16:42.14:0,42,1640	0/0:35,0:35:93.32:0,93,3588	0/0:28,0:28:78.27:0,78,3019	0/0:16,0:16:42.14:0,42,1665	1/1:5,9:14:27.03:563,27,0	1/1:2,7:9:18.02:395,18,0	0/0:27,0:27:78.25:0,78,2960	1/1:3,20:23:57.67:1479,58,0	1/1:4,11:15:33.11:856,33,0	0/0:20,0:20:57.20:0,57,2267	0/0:24,0:24:72.24:0,72,2722	1/1:5,23:28:48.16:1246,48,0	0/0:22,0:22:60.21:0,60,2348	0/0:13,0:13:36.11:0,36,1193	0/0:19,0:19:51.14:0,51,1548	0/0:23,0:23:66.21:0,66,2509	0/0:10,0:10:30.10:0,30,1129	1/1:1,5:6:11.88:311,12,0	1/1:3,9:12:18.06:467,18,0	0/0:17,0:17:51.18:0,51,1990	1/1:4,15:19:45.11:979,45,0	1/1:2,12:14:36.12:934,36,0	1/1:0,12:12:36.08:877,36,0
chr10	18798994	.	A	AT	4344.63	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-12.223;DP=562;FS=21.112;HRun=10;HaplotypeScore=63.6756;InbreedingCoeff=0.9722;MQ=72.14;MQ0=0;MQRankSum=0.766;QD=22.51;ReadPosRankSum=-4.246;VQSLOD=2.8128;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:1,0:37:67.22:0,67,194	0/0:9,0:9:20.94:0,21,169	0/0:13,0:12:12.98:0,13,78	0/0:7,0:6:5.94:0,6,42	0/0:23,0:23:59.69:0,60,474	1/1:0,13:13:27.07:288,27,0	1/1:3,15:18:39.10:416,39,0	1/1:5,24:29:72.08:724,72,0	0/0:1,0:22:38.70:0,39,112	0/0:25,0:25:62.89:0,63,516	0/0:12,0:12:23.91:0,24,189	1/1:1,21:22:51.12:544,51,0	0/0:20,0:20:50.91:0,51,416	0/0:25,0:25:59.83:0,60,483	1/1:2,17:19:48.11:504,48,0	0/0:21,0:21:50.91:0,51,416	0/0:30,0:30:68.85:0,69,557	0/0:30,0:30:80.89:0,81,665	1/1:4,23:27:65.13:650,65,0	1/1:0,9:9:24.06:255,24,0	1/1:3,14:19:36.43:368,36,0	1/1:0,11:11:21.05:224,21,0	0/0:21,0:21:35.77:0,36,284	0/0:26,1:27:33.91:0,34,485	1/1:4,21:26:16.45:372,16,0	0/0:16,0:17:37.98:0,38,301	0/0:26,0:26:71.85:0,72,583	0/0:4,0:4:11.99:0,12,98
chr10	18800676	.	A	ATG	5790.32	PASS	AB=0.893;AC=49;AF=0.875;AN=56;BaseQRankSum=6.011;DP=676;FS=0.707;HRun=0;HaplotypeScore=183.7460;InbreedingCoeff=0.3825;MQ=61.46;MQ0=3;MQRankSum=-5.905;QD=9.73;ReadPosRankSum=0.239;VQSLOD=4.4591;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:42,0:42:32.73:295,33,0	1/1:11,0:11:3:29,3,0	0/0:40,0:24:31.98:0,32,334	0/0:41,0:35:41.86:0,42,482	1/1:20,0:20:17.11:154,17,0	1/1:17,0:17:21.02:196,21,0	1/1:25,0:25:21.01:191,21,0	1/1:23,17:40:64.11:786,64,0	1/1:22,0:22:21.03:200,21,0	1/1:32,0:32:26.79:594,27,0	1/1:15,0:15:8.99:78,9,0	1/1:22,0:22:23.97:218,24,0	1/1:21,0:21:32.25:291,32,0	1/1:20,0:20:30.04:287,30,0	1/1:23,0:23:32.36:304,32,0	1/1:28,0:28:33.06:329,33,0	1/1:30,0:30:20.51:167,21,0	1/1:23,0:23:6.01:68,6,0	1/1:24,0:23:4.73:333,5,0	1/1:15,0:15:15.02:142,15,0	0/1:18,16:33:30.18:42,0,30	1/1:21,1:22:27.04:258,27,0	1/1:13,0:13:14.97:144,15,0	1/1:31,0:31:8.34:50,8,0	1/1:17,0:18:9.01:86,9,0	0/1:24,0:24:64.46:286,0,64	0/1:21,0:21:5.99:217,0,6	1/1:2,0:2:2.55:43,3,0
chr10	18800682	.	G	GTGTGTGTGTGTGTC	35031.09	PASS	AB=0.659;AC=48;AF=0.857;AN=56;BaseQRankSum=-7.352;DP=791;FS=1.351;HRun=0;HaplotypeScore=191.2509;InbreedingCoeff=0.3262;MQ=56.22;MQ0=3;MQRankSum=-5.758;QD=49.55;ReadPosRankSum=2.120;VQSLOD=4.4465;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,28:48:30.39:2336,30,0	1/1:2,6:11:2.70:198,3,0	0/0:42,0:22:44.63:0,45,790	0/0:42,0:36:50.40:0,50,895	0/1:2,17:25:17.82:855,0,18	1/1:4,9:22:21.07:1288,21,0	1/1:5,17:31:21.07:1386,21,0	1/1:40,0:40:85.12:2156,85,0	1/1:5,13:23:21.07:1353,21,0	1/1:6,20:35:37.43:2752,37,0	1/1:7,9:16:6.02:383,6,0	1/1:3,17:26:23.75:1426,24,0	1/1:2,17:27:33.11:2142,33,0	1/1:3,17:31:30.10:2026,30,0	1/1:4,16:25:33.11:2205,33,0	1/1:5,20:34:33.11:2055,33,0	1/1:10,20:39:24.01:1454,24,0	1/1:7,10:23:9.03:616,9,0	1/1:8,11:28:40.75:1543,41,0	1/1:4,11:19:15.05:999,15,0	0/1:33,0:32:24.83:110,0,25	1/1:3,17:29:27.09:1741,27,0	1/1:2,11:18:14.60:978,15,0	1/1:14,14:38:3.01:204,3,0	1/1:2,12:25:9.03:615,9,0	0/1:9,11:31:37.46:2325,0,37	0/1:3,16:27:5.44:1686,0,5	1/1:2,0:2:6.02:197,6,0
chr10	18801934	.	G	GC	14805.71	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-14.644;DP=758;FS=7.029;HRun=0;HaplotypeScore=72.9368;InbreedingCoeff=1.0000;MQ=75.99;MQ0=0;MQRankSum=-1.840;QD=43.67;ReadPosRankSum=4.343;VQSLOD=5.1889;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,120,1673	1/1:1,18:19:48.16:753,48,0	0/0:17,0:17:42:0,42,604	0/0:21,0:21:60.16:0,60,799	1/1:0,42:42:99:1771,111,0	0/0:24,0:24:72.22:0,72,988	0/0:22,0:22:63.19:0,63,854	0/0:37,0:37:99:0,111,1488	0/0:25,0:25:75.21:0,75,1011	1/1:0,29:29:87.30:1391,87,0	1/1:1,15:16:45.15:718,45,0	0/0:18,0:18:54.18:0,54,754	1/1:2,20:22:47.89:766,48,0	1/1:0,34:34:87.30:1390,87,0	0/0:37,0:37:99:0,111,1516	0/0:38,0:38:99:0,114,1553	1/1:0,33:33:93.32:1484,93,0	0/0:27,0:27:78.23:0,78,1068	0/0:21,0:21:63.19:0,63,860	0/0:25,0:25:75.24:0,75,1027	0/0:27,0:27:81.27:0,81,1133	0/0:22,0:22:66.22:0,66,922	1/1:0,19:19:50.84:814,51,0	1/1:0,35:35:99:1631,102,0	0/0:17,0:17:51.17:0,51,712	1/1:0,33:33:99:1571,99,0	1/1:0,38:38:99:1606,102,0	1/1:0,19:19:57.19:910,57,0
chr10	18802535	.	T	TCTC	15096.17	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=18.012;DP=745;FS=1.309;HRun=0;HaplotypeScore=126.4346;InbreedingCoeff=0.9951;MQ=82.19;MQ0=0;MQRankSum=-10.032;QD=62.90;ReadPosRankSum=3.596;VQSLOD=6.5405;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:43:99:0,131,2407	1/1:1,5:6:12.04:296,12,0	0/0:23,0:23:69.23:0,69,1187	0/0:31,0:31:84.23:0,84,1444	1/1:0,18:20:47.26:1175,47,0	0/0:22,0:22:66.23:0,66,1230	0/0:35,0:35:99:0,105,1881	0/0:38,0:38:99:0,108,1984	0/0:36,0:36:99:0,102,1858	1/1:0,20:23:66.23:1613,66,0	1/1:1,12:13:30.09:738,30,0	0/0:33,0:33:99:0,99,1845	1/1:0,22:23:63.22:1547,63,0	1/1:0,28:28:72.25:1771,72,0	0/0:32,0:32:96.33:0,96,1790	0/0:30,0:30:90.31:0,90,1669	1/1:0,25:26:60.21:1461,60,0	0/0:25,0:25:72.23:0,72,1284	0/0:20,0:20:60.17:0,60,1023	0/0:28,0:28:84.27:0,84,1521	0/0:59,0:59:99:0,178,3164	0/0:23,0:23:66.19:0,66,1167	1/1:0,14:15:39.13:960,39,0	1/1:0,19:20:48.16:1180,48,0	0/0:26,0:26:78.27:0,78,1454	1/1:0,22:22:60.21:1477,60,0	1/1:1,35:37:96.33:2361,96,0	1/1:0,7:7:21.07:517,21,0
chr10	18803072	.	TC	T	9439.45	PASS	AC=20;AF=0.625;AN=32;BaseQRankSum=12.072;DP=415;FS=9.308;HRun=3;HaplotypeScore=103.0864;InbreedingCoeff=1.0000;MQ=96.91;MQ0=0;MQRankSum=-4.443;QD=35.76;ReadPosRankSum=2.505;VQSLOD=4.4927;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,108,1553	./.	0/0:18,0:18:38.36:0,38,520	0/0:25,0:26:72.67:0,73,976	./.	1/1:1,23:24:63.20:781,63,0	1/1:0,18:18:54.17:670,54,0	1/1:0,27:27:81.22:969,81,0	0/0:18,0:18:48.16:0,48,691	./.	./.	1/1:0,22:22:66.21:818,66,0	./.	./.	1/1:0,31:31:90.28:1116,90,0	0/0:26,0:26:78.26:0,78,1119	./.	0/0:27,0:27:81.24:0,81,1138	1/1:0,31:31:90.28:1108,90,0	1/1:1,25:26:72.23:893,72,0	1/1:0,32:32:93.29:1153,93,0	1/1:0,30:30:90.28:1115,90,0	./.	./.	1/1:1,22:23:66.21:817,66,0	./.	./.	./.
chr10	18803374	.	T	TA	8303.34	PASS	AC=20;AF=0.625;AN=32;BaseQRankSum=6.110;DP=388;FS=5.350;HRun=6;HaplotypeScore=122.6121;InbreedingCoeff=0.9981;MQ=81.48;MQ0=0;MQRankSum=-2.070;QD=32.31;ReadPosRankSum=0.134;VQSLOD=3.0937;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:87.20:0,87,887	./.	0/0:18,0:17:33.27:0,33,302	0/0:11,0:10:21.05:0,21,214	./.	1/1:1,22:23:57.18:717,57,0	1/1:3,10:13:24.08:302,24,0	1/1:3,29:32:78.18:933,78,0	0/0:24,0:24:57.12:0,57,582	./.	./.	1/1:2,32:34:99:1238,99,0	./.	./.	1/1:1,28:29:81.26:1019,81,0	0/0:31,0:31:81.15:0,81,813	./.	0/0:15,0:15:45.10:0,45,459	1/1:2,9:11:27.09:339,27,0	1/1:2,32:34:93.26:1151,93,0	1/1:1,20:21:51.16:642,51,0	1/1:1,23:24:57.18:717,57,0	./.	./.	1/1:1,35:36:99:1246,99,0	./.	./.	./.
chr10	18803517	.	A	AGCACT	13098.41	PASS	AC=20;AF=0.625;AN=32;BaseQRankSum=-7.034;DP=317;FS=4.929;HRun=0;HaplotypeScore=103.6923;InbreedingCoeff=0.9987;MQ=98.87;MQ0=0;MQRankSum=-8.021;QD=70.04;ReadPosRankSum=-0.148;VQSLOD=5.7162;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:96.31:0,96,1971	./.	0/0:15,0:15:30.57:0,31,635	0/0:23,0:23:60.21:0,60,1240	./.	1/1:1,13:15:36.12:1122,36,0	1/1:6,11:18:33.11:986,33,0	1/1:5,15:21:54.16:1588,54,0	0/0:22,0:22:63.22:0,63,1307	./.	./.	1/1:8,19:27:60.21:1856,60,0	./.	./.	1/1:5,15:21:51.17:1591,51,0	0/0:24,0:24:72.24:0,72,1473	./.	0/0:8,0:8:24.08:0,24,511	1/1:5,3:8:24.08:675,24,0	1/1:5,21:27:63.22:1786,63,0	1/1:5,17:22:51.17:1527,51,0	1/1:2,10:12:36.12:961,36,0	./.	./.	1/1:8,8:16:39.13:1006,39,0	./.	./.	./.
chr10	18803606	.	CA	C	4277.69	PASS	AB=1.000;AC=21;AF=0.656;AN=32;BaseQRankSum=4.143;DP=323;FS=2.994;HRun=10;HaplotypeScore=70.8277;InbreedingCoeff=0.8672;MQ=74.60;MQ0=2;MQRankSum=-1.143;QD=20.18;ReadPosRankSum=2.461;VQSLOD=5.9777;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,1:29:46.14:0,46,735	./.	0/0:14,0:13:12.02:0,12,126	0/0:16,0:16:20.07:0,20,189	./.	1/1:1,19:20:56.93:487,57,0	1/1:1,16:16:35.99:313,36,0	1/1:5,25:30:41.77:578,42,0	0/0:24,0:24:54.12:0,54,586	./.	./.	1/1:6,20:26:35.79:536,36,0	./.	./.	1/1:4,14:18:44.99:391,45,0	0/0:26,0:24:63.15:0,63,683	./.	0/1:10,0:9:4.51:5,0,165	1/1:3,12:15:7.04:281,7,0	1/1:6,17:23:55.26:492,55,0	1/1:1,14:15:38.29:337,38,0	1/1:1,15:16:38.98:339,39,0	./.	./.	1/1:0,22:22:59.99:521,60,0	./.	./.	./.
chr10	18803666	.	TACACACACACACAC	T	2195.79	PASS	AB=0.883;AC=9;AF=0.281;AN=32;BaseQRankSum=6.686;DP=386;FS=0.000;HRun=0;HaplotypeScore=227.7907;InbreedingCoeff=0.1272;MQ=70.50;MQ0=14;MQRankSum=-6.030;QD=11.93;ReadPosRankSum=2.733;VQSLOD=2.4702;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:25,4:28:14.57:419,0,15	./.	./.	0/0:27,0:22:3.01:0,3,37	./.	0/0:20,0:22:30.10:0,30,1492	0/0:22,0:22:34.36:0,34,1711	0/1:34,0:34:16.71:45,0,17	0/1:15,16:31:3.04:1088,0,3	0/0:1,0:1:3.01:0,3,57	./.	0/0:20,0:21:51.16:0,51,2271	./.	./.	0/0:22,0:28:61.15:0,61,2921	1/1:15,0:21:24.16:228,24,0	./.	0/0:9,0:8:2.75:0,3,78	0/1:16,1:16:19.52:204,0,20	1/1:10,1:11:1.99:218,2,0	0/1:33,0:29:23.54:111,0,24	0/0:24,0:25:45.15:0,45,2243	./.	./.	0/0:14,0:14:21.07:0,21,1178	./.	./.	./.
chr10	18804059	.	CACAT	C	9017.46	PASS	AC=24;AF=0.667;AN=36;BaseQRankSum=0.417;DP=554;FS=9.860;HRun=0;HaplotypeScore=243.4875;InbreedingCoeff=0.9163;MQ=54.92;MQ0=7;MQRankSum=-6.412;QD=29.86;ReadPosRankSum=-0.326;VQSLOD=3.2080;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:26:57.17:0,57,1357	./.	0/0:60,0:37:84.71:0,85,1664	0/0:52,0:40:75.60:0,76,1318	./.	1/1:3,20:23:60.18:996,60,0	1/1:11,13:24:51.01:693,51,0	1/1:29,16:45:99:1518,102,0	0/0:45,0:45:99:0,117,2728	./.	./.	1/1:10,27:37:83.89:1208,84,0	./.	1/1:1,0:1:3.01:52,3,0	1/1:13,25:38:74.76:1176,75,0	0/0:40,0:40:90.17:0,90,1987	./.	0/0:24,0:26:64.83:0,65,1314	1/1:12,7:17:29.96:399,30,0	1/1:6,13:17:29.96:505,30,0	1/1:12,27:39:17.14:423,17,0	1/1:7,24:31:63.15:1059,63,0	./.	1/1:0,1:1:3.01:52,3,0	1/1:3,22:25:54.05:937,54,0	./.	./.	./.
chr10	18804099	.	TACAC	T	9654.24	PASS	AB=0.880;AC=27;AF=0.844;AN=32;BaseQRankSum=4.327;DP=453;FS=11.191;HRun=0;HaplotypeScore=323.6817;InbreedingCoeff=0.9090;MQ=48.29;MQ0=3;MQRankSum=-4.610;QD=26.67;ReadPosRankSum=3.031;VQSLOD=3.2886;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,27:30:47.63:831,48,0	./.	0/0:46,0:36:62.27:0,62,1467	0/0:45,0:32:59.16:0,59,1731	./.	1/1:5,19:24:39.81:787,40,0	1/1:5,19:24:29.32:529,29,0	1/1:10,28:38:78.20:1281,78,0	1/1:3,30:33:83.96:1483,84,0	./.	./.	1/1:5,23:28:41.28:740,41,0	./.	./.	1/1:4,31:35:58.75:1020,59,0	1/1:7,21:28:41.55:741,42,0	./.	1/1:7,10:17:18.06:318,18,0	1/1:4,6:10:24.08:422,24,0	1/1:4,15:18:17.63:317,18,0	0/1:19,3:22:0.18:0,0,0	1/1:6,26:32:43.95:793,44,0	./.	./.	1/1:8,12:20:23.43:393,23,0	./.	./.	./.
chr10	18804139	.	T	TCACACA	911.68	PASS	AB=0.937;AC=15;AF=0.500;AN=30;BaseQRankSum=2.770;DP=440;FS=0.819;HRun=0;HaplotypeScore=283.9995;InbreedingCoeff=0.6778;MQ=44.52;MQ0=17;MQRankSum=-5.289;QD=4.77;ReadPosRankSum=0.719;VQSLOD=2.2756;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:34:60.65:0,61,838	./.	0/0:55,0:20:38.60:0,39,634	0/0:77,0:24:58.54:0,59,958	./.	1/1:17,2:19:8.78:203,9,0	1/1:22,1:23:4.84:78,5,0	1/1:22,0:21:22.75:280,23,0	0/0:29,0:30:58.16:0,58,833	./.	./.	1/1:27,0:27:17.49:300,17,0	./.	./.	0/1:29,2:31:0.57:48,0,1	0/0:25,0:25:16.09:0,16,318	./.	0/0:19,0:19:13.62:0,14,339	1/1:10,0:10:1.79:78,2,0	0/1:18,1:17:0.18:0,0,0	./.	0/1:22,1:23:0.03:0,0,0	./.	./.	1/1:16,0:16:2.86:50,3,0	./.	./.	./.
chr10	18804141	.	T	TCACA	1609.13	PASS	AB=0.954;AC=22;AF=0.733;AN=30;BaseQRankSum=1.946;DP=485;FS=2.237;HRun=0;HaplotypeScore=287.6308;InbreedingCoeff=0.3191;MQ=43.22;MQ0=23;MQRankSum=-1.268;QD=4.73;ReadPosRankSum=1.750;VQSLOD=1.6166;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:36:79.26:87,0,79	./.	0/0:57,0:18:11.90:0,12,104	0/0:80,0:26:9.22:0,9,276	./.	1/1:21,0:22:12.20:131,12,0	1/1:20,0:20:2.58:37,3,0	1/1:29,0:27:28.89:235,29,0	0/1:28,0:30:78.39:78,0,97	./.	./.	1/1:34,0:34:19.30:232,19,0	./.	./.	1/1:36,0:36:3.01:42,3,0	1/1:23,6:29:18.22:276,18,0	./.	1/1:16,3:20:1.69:366,2,0	1/1:15,0:14:20.22:199,20,0	0/1:22,0:20:0:1,0,0	./.	0/1:26,0:25:0:0,0,0	./.	./.	1/1:18,0:19:3.01:34,3,0	./.	./.	./.
chr10	18804169	.	TGAGAGAGA	T	277.23	PASS	AC=10;AF=0.385;AN=26;BaseQRankSum=1.647;DP=373;FS=6.097;HRun=0;HaplotypeScore=193.5918;InbreedingCoeff=0.6116;MQ=39.51;MQ0=28;MQRankSum=-2.009;QD=2.74;ReadPosRankSum=-0.724;VQSLOD=1.7138;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:40.01:0,40,580	./.	./.	./.	./.	1/1:15,2:16:2.99:27,3,0	1/1:9,4:10:3.01:53,3,0	0/0:26,0:21:9.05:0,9,56	0/0:29,0:28:26.84:0,27,489	./.	./.	1/1:28,3:33:2.75:213,3,0	./.	./.	1/1:22,1:24:3.01:33,3,0	0/0:23,0:23:30.56:0,31,853	./.	0/0:17,0:17:30.10:0,30,842	0/0:12,0:12:7.73:0,8,63	0/0:15,0:15:12.52:0,13,116	./.	0/0:18,2:20:0:0,0,0	./.	./.	1/1:8,4:14:2.59:57,3,0	./.	./.	./.
chr10	18805013	.	T	TA	1198.96	PASS	AC=4;AF=0.125;AN=32;BaseQRankSum=-9.118;DP=315;FS=0.000;HRun=9;HaplotypeScore=127.5940;InbreedingCoeff=0.8854;MQ=74.11;MQ0=0;MQRankSum=0.763;QD=21.41;ReadPosRankSum=2.095;VQSLOD=2.5076;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:28:73.91:0,74,611	./.	0/0:17,0:9:9.71:0,10,123	0/0:10,0:7:2.85:0,3,15	./.	0/0:31,0:31:86.62:0,87,728	0/0:16,0:16:38.17:0,38,306	0/0:30,0:30:58.15:0,58,446	0/0:9,0:9:20.98:0,21,180	./.	./.	0/0:14,0:14:29.98:0,30,260	./.	./.	0/0:11,0:11:32.98:0,33,283	1/1:2,16:18:45.12:498,45,0	./.	1/1:8,30:38:32.18:811,32,0	0/0:18,0:18:38.47:0,38,318	0/0:19,0:19:50.03:0,50,400	0/0:16,0:16:44.64:0,45,359	0/0:14,0:14:35.99:0,36,312	./.	./.	0/0:26,0:26:68.89:0,69,585	./.	./.	./.
chr10	18805995	.	ATTG	A	5465.29	PASS	AC=20;AF=0.625;AN=32;BaseQRankSum=5.543;DP=365;FS=1.650;HRun=0;HaplotypeScore=149.3459;InbreedingCoeff=0.9958;MQ=71.73;MQ0=0;MQRankSum=-4.869;QD=22.96;ReadPosRankSum=3.803;VQSLOD=5.0875;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:52.42:0,52,973	./.	0/0:28,0:27:51.15:0,51,937	0/0:27,0:25:51.17:0,51,962	./.	1/1:7,16:23:49.97:663,50,0	1/1:8,7:15:21.07:290,21,0	1/1:18,17:35:51.13:661,51,0	0/0:18,0:18:45.14:0,45,864	./.	./.	1/1:8,15:23:45.15:632,45,0	./.	./.	1/1:12,14:26:45.14:610,45,0	0/0:2,0:8:18.06:0,18,237	./.	0/0:5,0:21:48.16:0,48,631	1/1:18,5:23:24.07:321,24,0	1/1:12,16:28:51.17:716,51,0	1/1:7,13:19:24.04:337,24,0	1/1:11,13:24:39.12:518,39,0	./.	./.	1/1:3,17:20:51.17:716,51,0	./.	./.	./.
chr10	18806054	.	T	TGA	1832.28	PASS	AB=0.591;AC=17;AF=0.327;AN=52;BaseQRankSum=-1.230;DP=448;FS=154.528;HRun=0;HaplotypeScore=105.1726;InbreedingCoeff=0.8205;MQ=61.87;MQ0=15;MQRankSum=-3.833;QD=21.56;ReadPosRankSum=2.937;VQSLOD=0.2944;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:65.93:0,66,710	1/1:4,0:4:6.10:101,6,0	0/0:43,0:11:22.09:0,22,200	0/0:36,0:16:17.63:0,18,225	0/0:1,13:15:1.82:0,2,5	0/0:16,0:16:45.25:0,45,362	0/0:16,0:16:39.23:0,39,289	0/0:21,0:20:47.55:0,48,448	0/0:15,0:14:32.98:0,33,364	1/1:1,12:13:18.48:219,18,0	./.	0/0:12,0:12:35.58:0,36,326	1/1:17,0:17:48.07:540,48,0	1/1:15,0:15:45.09:493,45,0	0/0:18,0:17:47.46:0,47,414	0/0:11,0:10:21.43:0,21,229	1/1:3,0:3:6.02:70,6,0	0/0:26,0:25:62.94:0,63,648	0/0:17,0:16:36.07:0,36,324	0/0:23,0:22:65.10:0,65,549	0/0:11,0:11:27.78:0,28,275	0/0:13,0:13:35.60:0,36,326	./.	1/1:6,0:5:8.99:100,9,0	0/0:8,0:8:13.89:0,14,103	0/1:4,9:13:17.21:203,0,17	1/1:5,0:5:8.80:107,9,0	1/1:9,0:8:14.43:187,14,0
chr10	18808678	.	TCAA	T	3551.51	PASS	AB=0.969;AC=40;AF=0.714;AN=56;BaseQRankSum=-5.689;DP=513;FS=40.738;HRun=0;HaplotypeScore=62.4777;InbreedingCoeff=0.1704;MQ=52.42;MQ0=101;MQRankSum=-1.742;QD=8.92;ReadPosRankSum=-0.599;VQSLOD=0.9428;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,0:25:18.05:203,18,0	1/1:8,0:4:0.58:45,1,0	0/0:39,0:21:57.14:0,57,607	0/0:44,0:30:75.17:0,75,781	0/1:22,1:15:15.34:249,0,15	1/1:3,5:8:12.04:167,12,0	1/1:1,13:13:12:173,12,0	1/1:13,0:10:21:248,21,0	1/1:5,0:15:24.06:255,24,0	1/1:14,0:6:8.52:132,9,0	1/1:14,0:7:13.01:158,13,0	1/1:5,11:13:24.05:380,24,0	1/1:7,0:4:9.03:115,9,0	1/1:11,0:8:1.87:81,2,0	1/1:4,10:11:15.05:237,15,0	0/0:19,0:15:20.81:0,21,149	0/1:27,1:19:45.61:144,0,46	0/0:13,0:7:10.05:0,10,56	0/1:11,0:8:23.23:156,0,23	0/1:15,1:10:67.15:70,0,67	0/1:31,0:16:59.16:111,0,59	1/1:1,0:8:3.01:32,3,0	1/1:12,0:7:3.73:63,4,0	0/1:30,2:21:24.57:195,0,25	1/1:6,16:16:8.99:122,9,0	0/1:16,0:7:18.30:64,0,18	1/1:15,0:11:0.75:144,1,0	0/1:9,0:7:5.52:6,0,8
chr10	18808679	.	CA	C	5288.53	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-1.983;DP=511;FS=58.427;HRun=2;HaplotypeScore=48.8109;InbreedingCoeff=0.7274;MQ=51.12;MQ0=101;MQRankSum=-1.362;QD=12.27;ReadPosRankSum=1.168;VQSLOD=0.6328;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:27,2:24:17.79:146,18,0	1/1:1,7:4:12.04:155,12,0	0/0:38,0:20:57.14:0,57,602	0/0:42,0:28:74.91:0,75,781	1/1:9,14:15:37.60:427,38,0	1/1:11,0:8:11.80:74,12,0	1/1:14,0:13:8.87:56,9,0	1/1:3,9:9:21.07:268,21,0	1/1:20,0:15:23.58:148,24,0	1/1:2,11:5:15.03:177,15,0	1/1:6,8:6:17.99:210,18,0	1/1:14,1:13:23.69:168,24,0	1/1:1,6:4:9.03:115,9,0	1/1:0,11:8:15.05:193,15,0	1/1:15,0:11:14.77:93,15,0	1/1:19,2:17:10.42:41,10,0	1/1:7,21:19:49.66:601,50,0	1/1:9,5:8:9.13:85,9,0	1/1:12,0:9:21.13:208,21,0	1/1:17,0:11:17.09:116,17,0	1/1:16,16:17:36.04:371,36,0	1/1:7,0:7:2.94:18,3,0	1/1:0,12:7:15.05:194,15,0	1/1:8,24:21:51.06:612,51,0	1/1:22,0:16:5.91:37,6,0	1/1:7,10:7:20.98:235,21,0	1/1:2,13:11:27.08:347,27,0	1/1:1,8:7:15.05:194,15,0
chr10	18809959	.	GGTGTGTGTGTGTGTGTGTCTGTGTGTGTGTGT	G	11400.40	PASS	AB=0.897;AC=29;AF=0.518;AN=56;BaseQRankSum=5.971;DP=739;FS=2.925;HRun=0;HaplotypeScore=432.4185;InbreedingCoeff=0.2925;MQ=61.22;MQ0=28;MQRankSum=-2.957;QD=25.00;ReadPosRankSum=0.861;VQSLOD=1.5505;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:39,0:39:55.19:55,0,1844	1/1:3,7:11:8.82:712,9,0	0/0:66,0:30:32.26:0,32,906	0/0:59,0:27:21.74:0,22,1256	1/1:6,15:20:9.03:675,9,0	0/0:18,0:18:30.08:0,30,2086	0/1:26,0:26:74.85:75,0,1747	0/1:16,0:16:24:24,0,814	0/0:29,0:29:18.53:0,19,764	1/1:7,26:33:57:1472,57,0	1/1:6,18:24:6.02:491,6,0	0/0:13,0:25:26.83:0,27,2197	1/1:2,14:16:12.04:982,12,0	1/1:7,23:28:14.57:1227,15,0	0/1:11,0:11:9.03:9,0,947	0/0:22,0:24:54.16:0,54,4888	0/1:6,31:38:99:819,0,189	0/0:26,0:27:42.32:0,42,5011	0/1:19,0:17:31.87:32,0,1591	0/1:16,0:16:9.61:10,0,761	0/1:37,0:37:10.67:11,0,3893	0/0:18,0:18:5.14:0,5,2246	1/1:4,12:16:6.02:225,6,0	0/1:6,23:29:87.50:725,0,88	0/0:15,0:15:23.44:0,23,1223	1/1:9,29:37:49.75:1734,50,0	1/1:10,19:30:18.20:1632,18,0	1/1:0,5:5:6.02:491,6,0
chr10	18809964	.	GTGTGTGTGTGTGTC	G	6424.27	PASS	AB=1.000;AC=39;AF=0.696;AN=56;BaseQRankSum=-0.773;DP=720;FS=6.638;HRun=0;HaplotypeScore=260.6538;InbreedingCoeff=-0.3199;MQ=55.39;MQ0=30;MQRankSum=-1.086;QD=9.75;ReadPosRankSum=3.616;VQSLOD=2.7705;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:38,0:38:52.74:582,53,0	1/1:9,0:9:9.03:293,9,0	0/0:61,0:25:6.82:0,7,182	0/1:58,0:25:74.38:74,0,196	1/1:19,0:18:9.03:234,9,0	0/1:18,0:18:64.03:64,0,637	0/1:28,0:28:99:218,0,391	0/1:19,0:18:99:152,0,256	1/1:6,20:26:17.91:701,18,0	1/1:31,0:31:32.74:466,33,0	1/1:22,0:22:6.02:197,6,0	0/1:26,0:26:17.31:17,0,724	1/1:16,0:15:12.04:395,12,0	1/1:28,0:26:14.84:493,15,0	0/1:10,0:10:33.18:33,0,180	0/1:29,0:29:30.14:30,0,1797	0/1:36,0:36:36.21:284,0,36	0/1:30,0:29:97.72:98,0,1767	0/1:17,0:15:53.69:54,0,525	0/1:14,0:14:56.11:56,0,148	0/1:42,0:41:99:182,0,1244	0/1:21,0:21:63.11:63,0,730	1/1:14,0:14:5.93:65,6,0	1/1:27,0:27:12.02:320,12,0	0/1:14,0:14:53.36:53,0,313	1/1:34,0:33:36.12:481,36,0	1/1:27,0:27:20.77:629,21,0	0/1:6,0:6:50.35:188,0,50
chr10	18811667	.	GAAGAAAGAAAGA	G	14287.77	PASS	AB=1.000;AC=39;AF=0.696;AN=56;BaseQRankSum=-8.041;DP=508;FS=4.868;HRun=0;HaplotypeScore=246.9750;InbreedingCoeff=-0.2806;MQ=48.69;MQ0=4;MQRankSum=3.327;QD=28.92;ReadPosRankSum=8.875;VQSLOD=3.0115;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:15,0:14:64.89:213,0,65	1/1:7,0:7:0.65:315,1,0	0/0:14,0:9:3.01:0,3,52	0/1:11,0:8:2.96:3,0,73	1/1:24,0:23:40.49:620,40,0	0/1:17,0:17:24.69:327,0,25	1/1:11,0:11:20.94:255,21,0	1/1:15,18:30:40.87:722,41,0	1/1:20,0:20:57.18:1075,57,0	0/1:20,0:20:15.95:848,0,16	0/1:25,0:25:8.56:736,0,9	0/1:14,0:14:99:378,0,185	0/1:19,0:19:5.94:508,0,6	1/1:13,0:12:30.09:567,30,0	0/1:27,0:27:99:542,0,282	0/1:18,0:18:99:373,0,199	0/1:16,0:16:0.67:525,0,1	0/1:11,0:11:11.36:104,0,11	1/1:15,0:15:30.09:637,30,0	1/1:36,0:36:87.22:1796,87,0	1/1:3,0:3:8.97:97,9,0	1/1:27,0:27:43.69:487,44,0	0/1:31,0:31:17.47:1071,0,17	0/1:13,0:13:7.52:272,0,8	0/1:23,0:22:92.73:413,0,93	0/1:18,0:18:36.46:421,0,36	1/1:26,0:25:0.22:964,0,0	1/1:1,0:1:2.92:17,3,0
chr10	18811678	.	GAAA	G	2519.42	PASS	AB=0.773;AC=19;AF=0.339;AN=56;BaseQRankSum=1.666;DP=500;FS=5.330;HRun=3;HaplotypeScore=223.1249;InbreedingCoeff=0.1590;MQ=41.43;MQ0=6;MQRankSum=-5.361;QD=9.40;ReadPosRankSum=4.881;VQSLOD=0.1633;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:15,3:17:99:115,0,115	0/1:4,4:8:6.08:129,0,6	0/0:8,0:4:12.01:0,12,142	0/1:9,0:7:3.29:3,0,133	0/1:16,10:25:81.94:179,0,82	0/0:17,0:17:37.76:0,38,332	0/0:9,0:9:25.91:0,26,198	0/0:24,0:20:53.30:0,53,524	0/1:13,10:23:30.74:254,0,31	0/1:13,10:22:55.94:347,0,56	0/1:14,7:22:58.19:186,0,58	0/0:14,0:14:39.40:0,39,390	1/1:11,8:19:22.01:268,22,0	0/1:9,5:13:1.04:135,0,1	0/0:30,0:30:79.81:0,80,755	0/0:19,0:19:54.83:0,55,535	0/1:11,5:16:99:127,0,206	0/0:10,0:10:20.95:0,21,199	0/0:14,0:14:14.47:0,14,218	0/0:31,0:31:30.65:0,31,192	0/0:6,0:6:12.87:0,13,117	0/0:26,0:26:57.64:0,58,445	1/1:13,14:27:17.02:308,17,0	0/1:10,3:13:33.95:85,0,34	0/0:24,0:23:60.38:0,60,495	0/1:17,5:22:50.31:252,0,50	1/1:14,13:26:18.68:295,19,0	1/1:0,1:1:2.80:13,3,0
chr10	18811703	.	AAAGG	A	3127.97	PASS	AB=1.000;AC=28;AF=0.538;AN=52;BaseQRankSum=0.168;DP=529;FS=8.601;HRun=0;HaplotypeScore=278.7906;InbreedingCoeff=-0.7029;MQ=37.04;MQ0=8;MQRankSum=-1.481;QD=5.99;ReadPosRankSum=2.308;VQSLOD=1.2125;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:16,0:15:9.11:143,0,9	0/1:7,0:7:17.50:57,0,18	./.	./.	0/1:25,0:24:59.97:60,0,151	0/1:22,0:22:99:110,0,125	0/1:14,0:14:29.63:76,0,30	0/1:37,0:32:7.42:7,0,222	0/1:22,0:22:83.92:84,0,179	0/1:26,0:25:99:153,0,147	0/1:19,0:19:88.47:93,0,88	0/1:19,0:19:76.19:98,0,76	0/1:17,0:17:41.18:118,0,41	0/1:15,0:14:52.91:53,0,65	0/1:31,0:31:82.36:335,0,82	1/1:19,0:19:50.50:382,50,0	0/1:19,0:19:24.02:134,0,24	0/1:13,0:13:23.37:59,0,23	0/1:22,0:21:65.11:65,0,217	1/1:23,11:34:68.11:464,68,0	0/0:6,0:6:4.45:0,4,71	1/1:23,0:23:22.87:269,23,0	0/1:25,0:25:50.26:181,0,50	0/1:16,0:16:31.29:36,0,31	0/1:25,0:24:56.52:57,0,161	0/1:22,0:22:66.61:67,0,140	0/1:25,0:24:62.82:154,0,63	0/1:9,0:9:22.97:23,0,73
chr10	18811738	.	G	GA	648.67	PASS	AB=0.989;AC=15;AF=0.268;AN=56;BaseQRankSum=10.716;DP=596;FS=1.631;HRun=3;HaplotypeScore=251.1690;InbreedingCoeff=-0.1571;MQ=47.54;MQ0=7;MQRankSum=-15.104;QD=2.16;ReadPosRankSum=1.528;VQSLOD=-0.2620;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:19:40.36:0,40,449	0/1:8,0:8:1.97:2,0,7	0/0:6,0:6:18:0,18,198	0/1:5,0:4:8.39:8,0,69	0/1:28,0:27:21.43:21,0,99	0/1:20,0:20:5.42:5,0,54	0/0:20,0:20:17.47:0,17,147	0/0:35,1:35:48.84:0,49,965	0/0:20,0:20:48.15:0,48,575	0/1:33,0:32:64.20:64,0,133	0/1:22,0:22:79.85:104,0,80	0/0:24,0:24:10.82:0,11,131	0/1:22,1:23:10.31:185,0,10	0/1:15,0:14:8.23:8,0,21	0/0:28,0:28:5.65:0,6,251	0/1:16,2:18:0.10:160,0,0	0/0:23,0:23:2.79:0,3,89	0/0:16,0:16:3.31:0,3,25	0/0:17,0:13:28.44:0,28,308	0/0:27,0:27:57.17:0,57,672	0/0:19,0:19:53.70:0,54,603	0/0:23,0:23:6.43:0,6,87	0/1:23,0:23:52.80:53,0,79	1/1:21,0:21:1.67:71,2,0	0/1:31,0:30:4.06:4,0,125	0/1:29,0:29:54.44:54,0,114	0/1:24,0:23:10.93:50,0,11	0/0:17,0:17:0.46:0,0,64
chr10	18811739	.	AAAG	A	8826.67	PASS	AB=0.963;AC=28;AF=0.500;AN=56;BaseQRankSum=2.074;DP=593;FS=3.530;HRun=0;HaplotypeScore=240.5272;InbreedingCoeff=0.1103;MQ=48.86;MQ0=7;MQRankSum=-2.209;QD=19.97;ReadPosRankSum=3.561;VQSLOD=4.5891;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:19:39.94:0,40,510	1/1:7,0:7:18.07:183,18,0	0/0:6,0:6:18.06:0,18,216	0/0:6,0:5:12.92:0,13,138	0/1:27,0:26:79.89:261,0,80	0/1:20,0:20:23.87:183,0,24	0/1:20,0:20:98.27:460,0,98	0/0:37,0:36:55.89:0,56,1203	0/0:20,0:20:48.15:0,48,595	0/1:32,0:31:99:697,0,127	0/1:22,0:22:90.68:412,0,91	0/1:24,0:24:99:460,0,102	1/1:23,0:23:39.26:567,39,0	1/1:15,0:14:26.98:288,27,0	0/1:28,0:28:99:649,0,334	1/1:15,3:18:54.09:729,54,0	1/1:22,0:22:22.57:525,23,0	0/1:3,13:16:30.27:83,0,30	0/0:17,0:13:27.03:0,27,412	0/0:26,0:26:57.07:0,57,712	0/0:19,0:19:56.94:0,57,840	0/1:23,0:23:52.02:540,0,52	0/1:22,0:22:92.54:345,0,93	1/1:21,0:21:49.41:593,49,0	0/1:31,0:30:99:434,0,200	0/1:30,0:30:9.53:598,0,10	1/1:24,0:23:46.94:463,47,0	1/1:17,0:17:0.51:359,1,0
chr10	18811742	.	G	GA	13284.20	PASS	AB=0.682;AC=35;AF=0.625;AN=56;BaseQRankSum=0.898;DP=611;FS=6.928;HRun=3;HaplotypeScore=208.2452;InbreedingCoeff=0.5070;MQ=55.12;MQ0=7;MQRankSum=-3.323;QD=28.75;ReadPosRankSum=5.601;VQSLOD=3.2472;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:21:41.99:0,42,479	1/1:0,7:7:21.07:282,21,0	0/0:10,0:10:27.06:0,27,309	0/1:8,0:7:5.50:6,0,127	1/1:6,21:26:17.39:631,17,0	1/1:4,15:19:14.79:586,15,0	0/1:4,17:21:12.76:647,0,13	0/0:36,0:35:79.12:0,79,971	0/0:16,0:16:48.15:0,48,575	0/1:7,26:32:17.56:1002,0,18	0/1:2,18:20:31.43:617,0,31	1/1:3,21:25:61.76:867,62,0	1/1:5,19:24:55.97:692,56,0	1/1:0,15:14:42.14:581,42,0	0/1:8,20:28:99:737,0,164	1/1:8,13:21:52.77:607,53,0	1/1:2,20:22:55.19:777,55,0	0/1:16,1:17:2.31:97,0,2	0/0:16,0:12:33.03:0,33,376	0/0:27,0:27:60.15:0,60,689	0/0:22,0:22:58.36:0,58,658	1/1:8,15:23:12.34:563,12,0	0/1:8,15:23:22.76:500,0,23	1/1:1,22:23:50.98:653,51,0	1/1:9,23:31:31.51:909,32,0	1/1:4,28:32:54.34:1139,54,0	1/1:2,22:23:57.19:771,57,0	1/1:2,16:18:24.40:620,24,0
chr10	18811746	.	G	GA	682.21	PASS	AB=0.973;AC=15;AF=0.268;AN=56;BaseQRankSum=12.896;DP=625;FS=6.993;HRun=3;HaplotypeScore=253.3911;InbreedingCoeff=-0.1670;MQ=60.11;MQ0=5;MQRankSum=-12.997;QD=2.26;ReadPosRankSum=1.872;VQSLOD=-0.4595;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:22:39.03:0,39,467	0/0:10,0:10:6.18:0,6,96	0/0:13,1:14:30.07:0,30,357	0/1:9,0:8:2.51:3,0,161	0/0:27,0:26:3.65:0,4,130	1/1:17,2:19:9.53:111,10,0	0/1:20,1:21:49.93:50,0,139	0/0:34,0:33:90.98:0,91,932	0/0:18,0:18:51.06:0,51,550	0/0:35,0:35:21.66:0,22,256	0/1:23,0:23:32.64:33,0,143	0/1:22,3:25:28.99:159,0,29	0/1:22,0:22:42.38:42,0,47	0/1:16,0:15:5.41:5,0,38	0/1:29,0:29:49.43:49,0,199	0/1:21,0:21:72.11:94,0,72	0/1:22,0:22:20.02:20,0,25	0/1:17,0:17:3.53:28,0,4	0/0:18,0:15:33.97:0,34,364	0/0:27,0:27:63.15:0,63,695	0/0:22,0:22:62.59:0,63,658	0/1:23,1:24:19.78:20,0,118	0/0:22,0:22:8.16:0,8,234	0/1:22,0:22:24.43:65,0,24	0/1:26,6:31:76.15:158,0,76	0/0:32,0:32:42.25:0,42,293	0/0:23,0:22:4.28:0,4,49	0/0:18,0:18:22.10:0,22,122
chr10	18812460	.	TG	T	11043.06	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=1.735;DP=609;FS=0.336;HRun=6;HaplotypeScore=78.1489;InbreedingCoeff=0.9910;MQ=75.68;MQ0=0;MQRankSum=-2.137;QD=27.33;ReadPosRankSum=5.349;VQSLOD=4.9978;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,147,1916	1/1:0,5:5:15.04:161,15,0	0/0:12,0:12:21.94:0,22,262	0/0:16,0:16:38.86:0,39,464	1/1:0,11:11:33.08:354,33,0	1/1:1,20:21:48.12:516,48,0	1/1:4,28:32:63.16:677,63,0	0/0:23,0:23:54.18:0,54,711	0/0:30,0:30:87.23:0,87,1095	1/1:3,25:27:72.15:763,72,0	1/1:3,11:14:33.08:353,33,0	1/1:2,23:25:66.17:709,66,0	1/1:0,26:26:66.17:709,66,0	1/1:1,29:30:87.22:933,87,0	1/1:2,15:17:45.11:484,45,0	1/1:0,14:14:39.10:419,39,0	1/1:1,32:33:93.23:1000,93,0	1/1:1,17:18:45.11:484,45,0	0/0:19,0:19:42.13:0,42,541	0/0:8,0:8:24.08:0,24,316	0/0:47,0:47:99:0,129,1665	1/1:2,14:16:27.07:290,27,0	1/1:0,18:18:45.11:483,45,0	1/1:2,30:32:87.22:935,87,0	1/1:0,18:18:51.13:548,51,0	1/1:3,19:22:54.13:580,54,0	1/1:2,18:20:48.12:516,48,0	1/1:0,4:4:12.03:129,12,0
chr10	18812809	.	CAG	C	1111.33	PASS	AB=0.928;AC=31;AF=0.554;AN=56;BaseQRankSum=8.745;DP=359;FS=19.747;HRun=0;HaplotypeScore=110.2184;InbreedingCoeff=0.2434;MQ=81.07;MQ0=1;MQRankSum=-5.102;QD=3.60;ReadPosRankSum=8.238;VQSLOD=0.3366;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:3,0:3:3.01:0,3,46	0/1:9,1:9:1.24:38,0,1	0/0:22,1:18:16.76:0,17,534	0/1:22,2:17:17.29:17,0,491	0/1:15,1:16:29.80:51,0,30	1/1:13,3:15:3.63:87,4,0	0/1:16,2:18:6.77:93,0,7	0/0:4,0:4:6.02:0,6,96	0/0:4,0:4:9.03:0,9,136	1/1:17,0:17:0.12:33,0,0	1/1:11,0:10:8.28:22,8,0	0/1:12,2:14:44.20:62,0,44	1/1:20,1:21:26.39:104,26,0	1/1:18,2:20:20.89:102,21,0	0/1:12,0:12:13.77:14,0,58	1/1:8,0:8:14.56:79,15,0	1/1:16,1:17:22.96:80,23,0	1/1:20,1:21:26.17:151,26,0	0/0:4,0:4:12.04:0,12,196	0/0:3,0:3:6.02:0,6,84	0/0:5,0:5:15.05:0,15,231	1/1:6,1:9:11.73:83,12,0	0/1:11,1:12:2.39:42,0,2	1/1:16,0:16:21.89:79,22,0	0/1:11,1:12:22.44:22,0,45	0/1:20,0:21:13.08:75,0,13	1/1:14,0:14:17.78:53,18,0	0/0:4,0:4:1.26:0,1,9
chr10	18812810	.	AG	A	6788.55	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=3.272;DP=354;FS=3.146;HRun=1;HaplotypeScore=84.5819;InbreedingCoeff=0.8911;MQ=78.02;MQ0=1;MQRankSum=-5.854;QD=23.74;ReadPosRankSum=6.541;VQSLOD=4.8751;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:3,0:3:3:0,3,25	1/1:6,4:9:22.17:195,22,0	0/0:23,0:17:30.28:0,30,399	0/0:22,0:15:11.21:0,11,276	1/1:7,8:15:38.59:367,39,0	1/1:14,2:15:41.35:305,41,0	1/1:13,5:18:53.87:441,54,0	0/0:4,0:4:6:0,6,54	0/0:4,0:4:8.97:0,9,71	1/1:0,17:17:50.36:524,50,0	1/1:3,7:10:24.05:268,24,0	1/1:13,1:14:39.58:293,40,0	1/1:1,20:21:48.14:570,48,0	1/1:2,18:20:33.10:390,33,0	1/1:8,3:11:29.79:224,30,0	1/1:4,4:8:23.98:202,24,0	1/1:1,16:17:42.08:490,42,0	1/1:12,9:21:56.73:454,57,0	0/0:4,0:4:12.01:0,12,124	0/0:3,0:3:5.99:0,6,51	0/0:5,0:5:14.96:0,15,120	1/1:3,6:9:11.91:86,12,0	1/1:1,11:12:23.81:265,24,0	1/1:0,16:16:35.63:432,36,0	1/1:12,0:12:32.30:249,32,0	1/1:1,19:20:54.23:620,54,0	1/1:0,14:14:30.08:348,30,0	1/1:4,0:4:8.89:65,9,0
chr10	18812818	.	C	CT	996.61	PASS	AB=1.000;AC=19;AF=0.365;AN=52;BaseQRankSum=4.419;DP=335;FS=3.111;HRun=0;HaplotypeScore=104.3090;InbreedingCoeff=0.7381;MQ=72.92;MQ0=2;MQRankSum=1.339;QD=6.23;ReadPosRankSum=8.207;VQSLOD=2.9092;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:13.88:0,14,75	0/0:7,1:7:2.12:0,2,34	0/0:23,0:14:37.42:0,37,304	0/0:19,0:10:8.83:0,9,68	0/1:13,0:13:23.55:24,0,29	0/0:13,0:12:29.79:0,30,238	0/0:17,0:17:44.75:0,45,372	./.	0/0:3,0:2:3:0,3,25	1/1:15,0:15:14:155,14,0	1/1:11,0:10:15.11:75,15,0	0/0:13,0:13:35.90:0,36,298	1/1:19,1:20:41.12:194,41,0	1/1:23,1:24:36.34:171,36,0	0/0:11,0:11:29.88:0,30,250	0/0:9,0:9:24.90:0,25,182	1/1:16,1:17:24.64:128,25,0	0/0:20,0:20:48:0,48,446	0/0:1,0:1:2.99:0,3,23	0/0:3,0:3:4.55:0,5,30	./.	0/0:8,0:8:11.97:0,12,103	1/1:12,1:13:3.15:47,3,0	1/1:17,0:17:32.86:142,33,0	0/0:10,0:10:29.93:0,30,247	1/1:19,0:19:20.76:174,21,0	1/1:11,0:11:20.18:78,20,0	0/0:3,0:3:3.15:0,3,13
chr10	18812823	.	CCCCG	C	2100.09	PASS	AB=1.000;AC=37;AF=0.685;AN=54;BaseQRankSum=1.054;DP=313;FS=2.224;HRun=0;HaplotypeScore=109.8074;InbreedingCoeff=0.2215;MQ=67.84;MQ0=2;MQRankSum=1.267;QD=7.92;ReadPosRankSum=4.536;VQSLOD=2.5234;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:9,0:9:11.79:100,12,0	0/0:6,0:5:1.96:0,2,15	0/0:19,0:11:31.19:0,31,263	0/0:17,0:8:7.23:0,7,51	0/1:13,0:13:13.28:13,0,42	1/1:10,1:11:15.33:183,15,0	1/1:16,1:17:38.37:444,38,0	1/1:5,0:5:6:51,6,0	1/1:4,0:3:2.98:25,3,0	1/1:15,0:15:3.41:59,3,0	0/1:10,0:9:0.42:34,0,0	0/1:13,0:13:12.07:87,0,12	1/1:20,0:20:16.98:98,17,0	0/1:21,0:21:33.19:33,0,41	1/1:11,0:11:9.81:142,10,0	1/1:4,4:8:20.96:209,21,0	1/1:16,0:16:4.75:42,5,0	1/1:12,9:21:32.88:375,33,0	0/0:1,0:1:2.99:0,3,23	0/0:2,0:2:2.92:0,3,17	./.	1/1:6,1:7:9.45:106,9,0	1/1:13,0:13:1.70:67,2,0	1/1:16,0:16:4.41:49,4,0	0/1:6,0:6:3.04:41,0,3	0/1:17,0:17:2.09:52,0,2	1/1:10,0:10:6.57:24,7,0	0/1:2,0:2:5.32:19,0,5
chr10	18812824	.	CCCG	C	3497.42	PASS	AC=46;AF=0.885;AN=52;BaseQRankSum=-1.176;DP=309;FS=0.000;HRun=0;HaplotypeScore=100.2908;InbreedingCoeff=0.5999;MQ=67.97;MQ0=2;MQRankSum=-3.069;QD=13.05;ReadPosRankSum=3.450;VQSLOD=3.0402;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,0:8:11.97:100,12,0	1/1:6,0:5:8.14:37,8,0	0/0:19,0:11:25.52:0,26,208	0/0:16,0:7:5.52:0,6,27	1/1:12,0:13:9.34:76,9,0	1/1:10,1:11:15.76:129,16,0	1/1:15,4:19:44.68:403,45,0	1/1:5,0:5:6:51,6,0	1/1:4,0:3:3:25,3,0	1/1:15,0:15:36.15:212,36,0	1/1:11,0:10:19.69:137,20,0	1/1:11,2:13:8.97:77,9,0	1/1:19,0:19:52.27:291,52,0	1/1:19,0:20:28.64:207,29,0	1/1:9,3:12:14.96:134,15,0	1/1:8,0:8:20.85:178,21,0	1/1:16,0:16:31.80:194,32,0	1/1:18,1:19:33.03:312,33,0	./.	0/0:2,0:2:0:0,0,0	./.	1/1:5,2:7:9.48:82,9,0	1/1:13,0:13:24.97:187,25,0	1/1:17,0:17:31.80:222,32,0	1/1:4,0:4:4.56:34,5,0	1/1:16,0:16:38.76:238,39,0	1/1:10,0:10:27.94:143,28,0	1/1:2,0:2:2.97:25,3,0
chr10	18812825	.	CCG	C	4861.37	PASS	AB=1.000;AC=50;AF=0.926;AN=54;BaseQRankSum=-2.560;DP=305;FS=2.755;HRun=0;HaplotypeScore=89.9242;InbreedingCoeff=0.3774;MQ=68.26;MQ0=2;MQRankSum=-4.272;QD=17.18;ReadPosRankSum=2.050;VQSLOD=5.0660;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,0:8:12.46:101,12,0	1/1:5,0:4:8.96:70,9,0	0/0:19,0:11:4.58:0,5,164	0/1:15,0:7:7.53:8,0,8	1/1:13,0:13:27.10:189,27,0	1/1:7,3:10:16.17:117,16,0	1/1:18,2:20:47.90:392,48,0	1/1:5,0:5:6:51,6,0	1/1:3,0:2:3:25,3,0	1/1:16,0:16:44.52:374,45,0	1/1:12,0:11:28.95:236,29,0	1/1:13,1:14:8.97:74,9,0	1/1:19,0:19:56.79:476,57,0	1/1:19,0:19:48.38:377,48,0	1/1:11,0:11:15.86:124,16,0	1/1:7,0:7:20.31:149,20,0	1/1:17,0:17:41.03:355,41,0	1/1:17,0:17:32.86:252,33,0	0/1:1,0:1:0:0,0,0	1/1:2,0:2:2.98:22,3,0	./.	1/1:6,0:6:8.96:70,9,0	1/1:13,0:13:31.82:273,32,0	1/1:18,0:18:43.27:383,43,0	1/1:2,1:3:5.87:39,6,0	1/1:16,0:16:44.33:392,44,0	1/1:11,0:11:32.91:273,33,0	1/1:2,0:2:5.79:37,6,0
chr10	18813009	.	CTG	C	3878.30	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=1.787;DP=620;FS=0.418;HRun=0;HaplotypeScore=121.7470;InbreedingCoeff=0.9824;MQ=75.56;MQ0=0;MQRankSum=0.297;QD=40.40;ReadPosRankSum=-0.317;VQSLOD=4.9779;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,129,2333	0/0:9,0:9:21.07:0,21,392	0/0:11,0:11:28.34:0,28,509	0/0:19,0:19:37.08:0,37,731	0/0:29,0:29:84.25:0,84,1492	0/0:19,0:19:57.16:0,57,994	0/0:40,0:40:99:0,114,2067	1/1:0,22:22:66.20:934,66,0	0/0:20,0:20:57.20:0,57,1059	0/0:22,0:22:60.16:0,60,1006	0/0:15,0:15:39.13:0,39,728	0/0:24,0:24:72.25:0,72,1339	0/0:27,0:27:81.26:0,81,1463	0/0:37,0:37:99:0,111,2076	0/0:26,0:26:78.25:0,78,1424	0/0:13,0:13:36.12:0,36,674	0/0:28,0:28:84.29:0,84,1572	0/0:22,0:22:66.23:0,66,1216	1/1:0,16:16:48.16:693,48,0	1/1:0,11:11:30.10:441,30,0	1/1:1,46:47:99:1810,123,0	0/0:18,0:18:54.15:0,54,946	0/0:17,0:17:51.17:0,51,954	0/0:28,0:28:84.27:0,84,1531	0/0:21,0:21:60.21:0,60,1123	0/0:14,0:14:42.13:0,42,752	0/0:18,0:18:48.15:0,48,866	0/0:3,0:3:9.03:0,9,168
chr10	18813190	.	TC	T	2463.89	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=0.894;DP=520;FS=1.554;HRun=2;HaplotypeScore=71.8037;InbreedingCoeff=0.9916;MQ=88.03;MQ0=0;MQRankSum=-1.627;QD=33.30;ReadPosRankSum=0.180;VQSLOD=3.6311;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:81.26:0,81,1192	0/0:6,0:6:18.03:0,18,246	0/0:26,0:26:54.25:0,54,922	0/0:14,0:15:19.41:0,19,424	0/0:18,0:18:51.17:0,51,761	0/0:17,0:17:45.15:0,45,673	0/0:30,0:30:90.30:0,90,1341	1/1:2,15:17:42.14:545,42,0	0/0:20,0:20:60.20:0,60,899	0/0:11,0:11:27.08:0,27,387	0/0:7,0:7:18.05:0,18,248	0/0:22,0:22:66.22:0,66,981	0/0:16,0:16:48.16:0,48,719	0/0:27,0:27:78.25:0,78,1147	0/0:16,0:16:48.16:0,48,715	0/0:19,0:19:57.18:0,57,834	0/0:35,0:35:99:0,102,1528	0/0:24,0:24:72.24:0,72,1079	1/1:3,12:15:39.02:483,39,0	1/1:0,7:7:21.07:273,21,0	1/1:0,35:35:99:1324,102,0	0/0:11,0:11:33.11:0,33,494	0/0:12,0:12:30.10:0,30,450	0/0:24,0:24:72.24:0,72,1079	0/0:12,0:12:36.12:0,36,538	0/0:16,0:16:48.14:0,48,680	0/0:27,0:27:78.26:0,78,1168	0/0:8,0:8:24.07:0,24,340
chr10	18814123	.	AC	A	2594.57	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=3.756;DP=613;FS=0.461;HRun=4;HaplotypeScore=73.1737;InbreedingCoeff=0.9968;MQ=87.09;MQ0=0;MQRankSum=-0.872;QD=27.90;ReadPosRankSum=-0.863;VQSLOD=2.5709;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:37:93.26:0,93,1246	0/0:10,0:10:30.09:0,30,402	0/0:21,0:21:57.19:0,57,791	0/0:22,0:24:62.77:0,63,801	0/0:14,0:14:27.03:0,27,338	0/0:14,0:14:36.10:0,36,470	0/0:34,0:34:96.30:0,96,1309	1/1:4,23:27:69.20:813,69,0	0/0:28,0:28:78.22:0,78,1054	0/0:11,0:11:27.09:0,27,375	0/0:12,0:12:21.07:0,21,292	0/0:31,0:31:90.26:0,90,1201	0/0:25,0:25:75.21:0,75,999	0/0:16,0:16:45.15:0,45,626	0/0:33,0:33:87.26:0,87,1164	0/0:22,0:22:65.46:0,65,484	0/0:40,0:40:99:0,114,1588	0/0:23,0:23:65.27:0,65,459	1/1:3,13:16:39.12:468,39,0	1/1:2,16:18:39.07:467,39,0	1/1:2,30:32:84.26:1007,84,0	0/0:13,0:13:30.02:0,30,379	0/0:19,0:19:42.14:0,42,580	0/0:30,0:30:90.28:0,90,1220	0/0:18,0:18:51.13:0,51,674	0/0:14,0:14:36.10:0,36,471	0/0:21,0:21:57.13:0,57,727	0/0:9,0:9:21.07:0,21,294
chr10	18814455	.	A	AGGGAAATCAATGGACGGTTCACC	33267.77	PASS	AB=0.875;AC=55;AF=0.982;AN=56;BaseQRankSum=-3.624;DP=358;FS=11.659;HRun=0;HaplotypeScore=474.1909;InbreedingCoeff=-0.0065;MQ=60.59;MQ0=0;MQRankSum=-0.972;QD=92.93;ReadPosRankSum=0.034;VQSLOD=3.9155;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:17:29.84:1227,30,0	1/1:12,0:12:28.91:1403,29,0	1/1:7,0:8:24.08:1078,24,0	0/1:6,1:7:16.49:685,0,16	1/1:17,0:17:11.63:1289,12,0	1/1:14,0:14:34.34:1626,34,0	1/1:11,0:11:13.21:861,13,0	1/1:11,0:11:30.07:964,30,0	1/1:14,0:14:30.49:1020,30,0	1/1:14,0:14:28.14:1053,28,0	1/1:20,0:20:45.69:1963,46,0	1/1:16,0:16:31.53:1537,32,0	1/1:12,0:12:29.60:1316,30,0	1/1:4,0:4:4.99:18,5,0	1/1:17,0:18:42.57:1574,43,0	1/1:10,0:10:19.82:561,20,0	1/1:9,0:9:6.45:356,6,0	1/1:7,0:8:13.05:695,13,0	1/1:10,0:10:20.99:967,21,0	1/1:18,0:18:43.07:1333,43,0	1/1:2,0:2:6.02:214,6,0	1/1:20,0:20:50.79:2315,51,0	1/1:20,0:20:47.29:2657,47,0	1/1:7,0:8:18.02:769,18,0	1/1:18,0:18:47.83:2450,48,0	1/1:13,0:13:23.82:1146,24,0	1/1:21,0:21:36.90:2176,37,0	1/1:6,0:6:2.84:14,3,0
chr10	18814456	.	G	GGGAAATCAATGGAG	2283.41	PASS	AB=0.714;AC=37;AF=0.974;AN=38;BaseQRankSum=-2.159;DP=49;FS=2.896;HRun=0;HaplotypeScore=19.6599;InbreedingCoeff=-0.1833;MQ=126.33;MQ0=0;MQRankSum=-1.793;QD=50.74;ReadPosRankSum=-1.940;VQSLOD=2.2972;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:4:3.01:69,3,0	1/1:1,0:1:3.01:76,3,0	1/1:2,1:6:18.06:771,18,0	0/1:3,0:5:19.50:415,0,20	1/1:1,0:1:3.01:50,3,0	1/1:2,0:2:3.01:76,3,0	1/1:3,0:3:6.02:97,6,0	1/1:3,0:3:9:80,9,0	1/1:1,0:1:3.01:40,3,0	1/1:2,0:2:3.01:53,3,0	./.	1/1:3,0:3:3.01:40,3,0	1/1:2,0:2:3.01:75,3,0	./.	1/1:2,0:2:5.98:97,6,0	./.	./.	./.	1/1:3,0:3:6.01:70,6,0	1/1:1,0:1:3:27,3,0	1/1:1,0:1:3.01:63,3,0	1/1:2,0:2:3.01:52,3,0	./.	./.	./.	1/1:1,0:2:6.02:191,6,0	1/1:1,0:1:3:25,3,0	./.
chr10	18814528	.	G	GGA	526.78	PASS	AB=0.808;AC=17;AF=0.304;AN=56;BaseQRankSum=5.869;DP=443;FS=1.733;HRun=0;HaplotypeScore=128.9558;InbreedingCoeff=-0.4477;MQ=57.37;MQ0=8;MQRankSum=-7.982;QD=2.23;ReadPosRankSum=6.741;VQSLOD=1.6594;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,1:28:42.50:0,42,1074	0/1:9,2:10:28.26:28,0,340	0/0:28,0:11:15.88:0,16,281	0/0:35,0:13:7.22:0,7,130	0/1:11,13:24:6.03:6,0,364	0/1:6,2:8:35.59:36,0,221	0/1:12,2:14:26.69:27,0,424	0/1:18,4:22:73.86:74,0,544	0/1:4,4:8:56.72:57,0,140	0/1:11,4:15:81.30:81,0,393	0/0:15,9:24:6.28:0,6,600	0/1:10,2:12:11.73:12,0,407	0/1:10,3:13:19.72:20,0,395	0/0:13,1:14:11.04:0,11,450	0/0:12,1:13:28.06:0,28,498	0/1:13,3:16:44.23:44,0,560	0/1:6,2:8:40.30:40,0,265	0/0:3,0:3:9.03:0,9,128	0/1:10,0:9:14.19:14,0,241	0/1:15,5:19:10.30:10,0,495	0/0:12,0:12:29.99:0,30,405	0/0:17,2:19:7.26:0,7,593	0/0:15,2:17:38.95:0,39,529	0/0:11,1:12:22.04:0,22,364	0/1:15,8:23:99:102,0,498	0/1:11,2:13:25.79:26,0,446	0/1:7,6:13:82.98:83,0,302	0/1:5,1:6:22.99:23,0,136
chr10	18814532	.	GGA	G	675.96	PASS	AB=0.806;AC=17;AF=0.304;AN=56;BaseQRankSum=5.755;DP=469;FS=3.769;HRun=0;HaplotypeScore=131.8835;InbreedingCoeff=-0.4503;MQ=56.88;MQ0=8;MQRankSum=-8.777;QD=2.52;ReadPosRankSum=5.569;VQSLOD=1.8106;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,1:29:58.99:0,59,1481	0/1:8,3:10:25.98:26,0,388	0/0:31,0:12:21.68:0,22,386	0/0:36,0:14:22.47:0,22,204	0/1:13,13:26:99:117,0,489	0/1:7,2:9:11.62:12,0,356	0/1:12,2:14:3.43:3,0,571	0/1:18,4:22:24.16:24,0,868	0/1:4,4:8:61.38:61,0,218	0/1:13,4:17:69.94:70,0,581	0/1:17,9:26:99:143,0,779	0/0:10,2:12:10.60:0,11,541	0/1:11,3:14:21.15:21,0,567	0/0:15,1:16:26.84:0,27,732	0/0:12,1:13:17.92:0,18,644	0/1:13,3:16:13.46:13,0,741	0/1:6,2:8:17.13:17,0,340	0/0:3,0:3:8.70:0,9,133	0/1:11,0:10:48.42:48,0,342	0/1:18,5:22:63.78:64,0,792	0/0:12,0:12:27.09:0,27,546	0/0:18,2:20:30.92:0,31,786	0/1:17,2:19:16.87:17,0,729	0/0:12,1:13:1.30:0,1,580	0/1:16,8:24:99:114,0,730	0/0:13,2:15:3.38:0,3,657	0/1:8,6:14:68.33:68,0,437	0/1:5,1:6:9:9,0,228
chr10	18814584	.	C	CAT	26405.23	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-6.036;DP=542;FS=0.709;HRun=0;HaplotypeScore=76.6221;InbreedingCoeff=0.9995;MQ=75.00;MQ0=1;MQRankSum=-8.366;QD=52.18;ReadPosRankSum=4.143;VQSLOD=5.5514;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,30:31:90.31:1723,90,0	1/1:3,9:12:33.10:584,33,0	0/0:17,0:17:43.64:0,44,575	0/0:19,0:18:45.09:0,45,601	1/1:0,18:18:51.17:983,51,0	1/1:2,10:12:36.11:648,36,0	1/1:4,12:16:45.15:854,45,0	1/1:11,22:33:93.24:1632,93,0	1/1:0,14:14:36.12:693,36,0	1/1:1,15:16:45.15:869,45,0	1/1:2,24:27:78.24:1437,78,0	1/1:2,18:20:57.20:1088,57,0	1/1:0,16:16:48.16:921,48,0	1/1:6,15:21:57.19:1060,57,0	1/1:3,18:21:57.18:1066,57,0	1/1:5,21:26:69.22:1289,69,0	1/1:2,15:16:48.16:907,48,0	1/1:1,12:13:33.11:637,33,0	1/1:4,14:18:54.14:955,54,0	1/1:0,18:19:54.19:1042,54,0	1/1:0,22:22:57.20:1100,57,0	1/1:5,13:18:48.15:871,48,0	1/1:3,16:20:60.17:1078,60,0	1/1:3,21:24:69.24:1326,69,0	1/1:4,11:15:42.13:763,42,0	1/1:4,21:25:69.24:1315,69,0	1/1:1,17:18:42.14:810,42,0	1/1:1,13:14:39.13:752,39,0
chr10	18814901	.	C	CAGACAGAG	6117.01	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-5.076;DP=745;FS=6.923;HRun=0;HaplotypeScore=186.2318;InbreedingCoeff=0.9595;MQ=71.97;MQ0=11;MQRankSum=-6.775;QD=37.76;ReadPosRankSum=-5.101;VQSLOD=3.0645;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:11,20:39:33.11:1299,33,0	0/0:7,0:7:15.05:0,15,349	0/0:43,0:26:39.95:0,40,815	0/0:60,0:46:58.33:0,58,1025	0/0:24,0:24:54.19:0,54,1286	0/0:16,0:16:42.13:0,42,999	0/0:22,0:22:30.12:0,30,981	1/1:46,0:46:70.47:1568,70,0	1/1:7,7:16:15.05:627,15,0	0/0:41,0:40:96.29:0,96,2188	0/0:20,0:20:45.15:0,45,1107	0/0:19,0:19:39.13:0,39,939	0/0:19,0:19:39.12:0,39,959	0/0:26,0:26:60.19:0,60,1496	0/0:30,0:30:57.18:0,57,1385	0/0:26,0:26:66.18:0,66,1421	0/0:32,0:32:66.20:0,66,1646	0/0:22,0:22:33.49:0,33,1124	1/1:14,18:36:72.23:1996,72,0	1/1:3,6:9:9.03:376,9,0	1/1:8,5:16:6.02:251,6,0	0/0:20,0:20:51.16:0,51,1113	0/0:25,0:25:48.13:0,48,1064	0/0:23,0:23:45.12:0,45,986	0/0:19,0:19:39.13:0,39,1009	0/0:21,0:21:39.12:0,39,906	0/0:45,0:43:99:0,111,2662	0/0:21,0:22:54.19:0,54,1336
chr10	18815679	.	T	TG	1888.53	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-8.478;DP=697;FS=21.073;HRun=4;HaplotypeScore=69.8787;InbreedingCoeff=0.9994;MQ=87.71;MQ0=0;MQRankSum=-3.871;QD=34.97;ReadPosRankSum=2.791;VQSLOD=1.8108;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,30:34:90.30:1231,90,0	0/0:13,0:13:39.11:0,39,442	0/0:29,0:29:68.37:0,68,807	0/0:22,0:22:60.14:0,60,668	0/0:26,0:26:69.18:0,69,768	0/0:26,0:26:72.19:0,72,807	0/0:17,0:17:48.14:0,48,544	0/0:28,0:28:75.20:0,75,836	1/1:1,19:20:57.19:780,57,0	0/0:24,0:24:65.77:0,66,716	0/0:30,0:30:81.20:0,81,899	0/0:35,0:35:99:0,105,1191	0/0:28,0:28:84.18:0,84,929	0/0:29,0:29:72.20:0,72,816	0/0:23,0:23:66.17:0,66,739	0/0:16,0:16:39.10:0,39,435	0/0:32,0:32:96.24:0,96,1067	0/0:10,0:10:30.09:0,30,340	0/0:22,0:22:51.14:0,51,578	0/0:32,0:32:93.20:0,93,1011	0/0:22,0:22:60.16:0,60,670	0/0:30,0:30:84.24:0,84,953	0/0:27,0:27:75.21:0,75,850	0/0:25,0:25:75.20:0,75,840	0/0:21,0:21:63.16:0,63,705	0/0:32,0:32:87.23:0,87,970	0/0:34,0:34:99:0,102,1157	0/0:10,0:10:30.09:0,30,340
chr10	18816299	.	AGTGTGT	A	2411.41	PASS	AB=0.801;AC=25;AF=0.481;AN=52;BaseQRankSum=5.098;DP=814;FS=2.355;HRun=0;HaplotypeScore=174.1569;InbreedingCoeff=0.4804;MQ=62.74;MQ0=41;MQRankSum=-7.145;QD=6.72;ReadPosRankSum=1.817;VQSLOD=2.8899;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:26,1:31:5.36:5,0,17	1/1:3,5:8:12.04:241,12,0	./.	0/0:89,0:32:0.89:0,1,2	1/1:13,7:20:3.48:43,3,0	0/0:15,0:21:15.04:0,15,324	0/0:31,0:35:49.68:0,50,1120	./.	0/1:18,1:23:12.31:12,0,23	1/1:15,2:16:8.99:174,9,0	0/0:4,2:6:3.01:0,3,50	0/0:22,0:24:29.78:0,30,700	1/1:18,12:30:24.03:479,24,0	1/1:24,13:37:11.19:223,11,0	0/0:23,0:30:27.06:0,27,549	1/1:17,0:22:13.10:150,13,0	0/1:37,4:41:99:240,0,170	1/1:18,0:21:3.01:42,3,0	0/0:20,0:19:3.01:0,3,37	0/0:12,0:14:15.05:0,15,372	0/0:63,0:59:42.08:0,42,821	0/0:14,0:16:15.05:0,15,344	0/1:8,7:16:0.05:94,0,0	1/1:27,4:30:0.46:1,0,0	0/0:13,0:19:9.03:0,9,220	1/1:17,9:26:23.16:524,23,0	1/1:14,4:20:12.04:188,12,0	0/1:9,4:13:68.72:169,0,69
chr10	18816697	.	GT	G	8407.19	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=10.964;DP=475;FS=7.322;HRun=8;HaplotypeScore=50.5950;InbreedingCoeff=0.9514;MQ=77.05;MQ0=0;MQRankSum=-1.785;QD=24.65;ReadPosRankSum=2.384;VQSLOD=5.5714;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,10:13:26.96:248,27,0	1/1:1,5:6:12.02:116,12,0	0/0:12,0:12:0.49:0,0,203	0/0:13,0:11:20.53:0,21,200	1/1:2,20:22:48.06:463,48,0	0/0:18,0:18:51.15:0,51,606	0/0:10,0:10:27.08:0,27,326	1/1:9,25:34:75.06:713,75,0	1/1:1,7:8:21.03:203,21,0	1/1:2,17:19:51.06:481,51,0	1/1:3,25:28:69.09:666,69,0	0/0:15,0:15:39.11:0,39,460	1/1:2,21:23:60.10:579,60,0	1/1:4,17:21:48.07:463,48,0	0/0:8,0:8:24.07:0,24,290	0/0:21,0:21:57.16:0,57,667	1/1:0,13:13:39.06:376,39,0	0/0:21,0:21:59.86:0,60,653	1/1:3,12:15:36.05:347,36,0	1/1:2,21:23:60.01:567,60,0	1/1:1,13:15:36.66:376,37,0	0/0:6,0:6:12.04:0,12,143	1/1:1,26:27:75.12:724,75,0	1/1:1,9:10:27.04:261,27,0	0/0:10,0:10:30.09:0,30,362	1/1:0,19:19:57.09:550,57,0	1/1:1,24:25:72.12:695,72,0	1/1:0,20:20:60.10:579,60,0
chr10	18817567	.	TCTTGCCTTATGTTTTTTTTTTTTTTTTTTTTTTTTGGAGCTGGGGAC	T	1812.19	PASS	AB=0.976;AC=14;AF=0.250;AN=56;BaseQRankSum=1.399;DP=529;FS=23.699;HRun=0;HaplotypeScore=538.2442;InbreedingCoeff=0.6759;MQ=81.67;MQ0=7;MQRankSum=-2.296;QD=16.47;ReadPosRankSum=1.145;VQSLOD=-0.1111;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:21:33.11:0,33,2124	0/0:11,0:11:21.03:0,21,907	0/0:34,0:19:32.26:0,32,1033	0/0:38,0:25:28.94:0,29,852	0/0:17,0:17:45.15:0,45,2210	1/1:11,5:16:8.55:1005,9,0	1/1:11,0:11:2.74:25,3,0	0/0:27,0:27:43.14:0,43,1792	0/0:17,0:16:27.09:0,27,1939	0/0:29,0:28:63.22:0,63,3565	0/0:19,0:19:48.16:0,48,2750	1/1:15,0:15:2.50:50,2,0	0/0:22,0:22:48.16:0,48,2833	0/0:17,0:17:39.13:0,39,1911	0/1:15,0:15:0:0,0,1	1/1:6,2:8:2.80:339,3,0	0/0:23,0:23:51.13:0,51,2875	0/1:19,1:20:99:353,0,333	0/0:17,0:17:27.08:0,27,1290	0/0:26,0:25:54.18:0,54,3306	0/0:6,0:6:9.03:0,9,508	1/1:11,0:11:2.62:21,3,0	0/0:19,0:19:48.64:0,49,2325	0/0:16,0:16:33.11:0,33,1639	1/1:14,0:14:8.52:171,9,0	0/0:28,0:28:66.23:0,66,3318	0/0:19,0:19:42.13:0,42,2543	0/0:10,0:10:21.07:0,21,1657
chr10	18817575	.	TATG	T	59.82	PASS	AB=0.982;AC=8;AF=0.143;AN=56;BaseQRankSum=7.921;DP=485;FS=29.267;HRun=0;HaplotypeScore=90.5458;InbreedingCoeff=0.1194;MQ=72.85;MQ0=12;MQRankSum=1.252;QD=0.56;ReadPosRankSum=-0.282;VQSLOD=-0.1005;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:45.50:0,45,715	0/0:10,0:10:14.44:0,14,234	0/0:37,0:17:45.43:0,45,550	0/0:29,0:16:24.09:0,24,288	0/0:17,0:17:50.65:0,51,605	0/1:15,0:15:2.84:3,0,324	0/0:8,0:8:24.06:0,24,293	0/1:23,2:25:23.57:36,0,24	0/0:13,0:12:31.48:0,31,538	0/0:25,0:24:71.90:0,72,1059	0/0:18,1:19:49.67:0,50,647	0/0:13,0:13:36.11:0,36,440	0/0:18,0:18:16.63:0,17,615	0/0:15,0:14:42.14:0,42,646	0/0:15,0:15:45.10:0,45,539	0/1:6,0:6:2.43:2,0,125	0/0:21,0:20:15.55:0,16,448	0/0:15,0:15:16.86:0,17,365	0/1:16,0:15:10.95:40,0,11	0/1:27,1:26:19.50:62,0,19	1/1:6,1:6:5.51:14,6,0	0/0:10,0:10:30.09:0,30,367	0/0:18,1:19:46.39:0,46,556	0/0:15,0:15:40.39:0,40,520	0/0:13,0:13:39.10:0,39,473	0/0:26,0:26:14.14:0,14,769	0/0:19,0:19:33.63:0,34,586	0/1:10,0:10:25.48:25,0,159
chr10	18817577	.	TG	T	1252.12	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=0.719;DP=477;FS=1.113;HRun=1;HaplotypeScore=70.9789;InbreedingCoeff=0.8378;MQ=69.42;MQ0=13;MQRankSum=1.902;QD=14.91;ReadPosRankSum=-1.439;VQSLOD=2.7115;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:22:45.37:0,45,353	0/0:9,0:9:19.60:0,20,107	0/0:35,0:15:22.70:0,23,243	0/0:27,0:14:14.05:0,14,125	0/0:17,0:17:45.02:0,45,305	0/0:16,0:16:28.39:0,28,178	0/0:7,0:7:20.64:0,21,134	1/1:4,20:24:53.02:428,53,0	0/0:12,1:12:32.36:0,32,257	0/0:27,0:26:70.84:0,71,564	0/0:19,0:19:48.18:0,48,339	0/0:13,0:13:35.04:0,35,212	0/0:16,0:16:42.57:0,43,325	0/0:15,0:14:41.80:0,42,327	0/0:13,0:13:38.34:0,38,248	0/0:6,0:6:10.99:0,11,68	0/0:21,0:21:30.82:0,31,263	0/0:14,0:14:31.36:0,31,198	1/1:2,13:14:35.76:286,36,0	1/1:27,1:26:62.71:554,63,0	1/1:7,0:6:15.01:133,15,0	0/0:10,0:10:29.45:0,29,192	0/0:18,0:18:42.20:0,42,275	0/0:15,0:15:34.13:0,34,254	0/0:12,0:12:35.41:0,35,229	0/0:28,0:27:9.18:0,9,364	0/0:18,0:18:36.85:0,37,293	0/1:10,0:10:14.24:14,0,73
chr10	18818673	.	CTG	C	3858.42	PASS	AB=1.000;AC=14;AF=0.250;AN=56;BaseQRankSum=5.371;DP=760;FS=13.425;HRun=0;HaplotypeScore=234.6800;InbreedingCoeff=0.7182;MQ=59.61;MQ0=8;MQRankSum=-9.996;QD=17.38;ReadPosRankSum=2.517;VQSLOD=2.2601;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:38,0:38:29.26:219,29,0	0/0:3,0:3:3.01:0,3,48	0/0:52,0:35:73.45:0,73,1074	0/0:36,0:23:42.15:0,42,793	0/0:20,0:20:39.12:0,39,618	0/0:20,0:20:7.04:0,7,57	0/0:17,0:17:2.31:0,2,22	1/1:9,29:38:93.28:1155,93,0	1/1:20,0:20:38.12:244,38,0	0/0:37,0:37:96.31:0,96,1554	0/0:24,0:24:54.16:0,54,871	0/0:22,0:22:15.13:0,15,114	0/0:29,0:28:75.23:0,75,1204	0/0:34,1:35:46.12:0,46,1313	0/0:29,0:29:14.02:0,14,116	0/1:21,0:21:11.11:107,0,11	0/0:34,0:34:81.28:0,81,1338	0/1:20,0:20:31.04:63,0,31	1/1:13,18:31:60.17:736,60,0	1/1:6,19:25:63.17:770,63,0	1/1:9,20:29:44.95:564,45,0	0/0:30,0:30:8.50:0,9,64	0/0:20,0:19:39.13:0,39,649	0/0:24,0:24:51.14:0,51,795	0/0:22,0:22:7.87:0,8,40	0/0:36,0:36:87.28:0,87,1420	0/0:30,1:30:25.10:0,25,959	0/0:17,0:17:33.11:0,33,527
chr10	18818677	.	GTGTGTGTGTATT	G	2669.24	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=2.449;DP=777;FS=2.179;HRun=0;HaplotypeScore=359.7317;InbreedingCoeff=-0.0068;MQ=54.69;MQ0=10;MQRankSum=-9.496;QD=7.65;ReadPosRankSum=3.667;VQSLOD=1.3400;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:5,34:39:12.35:744,12,0	0/0:4,0:4:6.02:0,6,267	0/0:51,0:33:80.45:0,80,2205	0/0:38,0:24:66.18:0,66,2146	0/0:21,0:21:45.09:0,45,1365	0/1:23,0:23:20.72:21,0,266	0/0:16,0:16:1.47:0,1,21	0/1:41,0:40:99:157,0,749	1/1:2,16:19:37.42:1348,37,0	0/0:38,0:38:99:0,102,4180	0/0:24,0:24:57.20:0,57,2035	0/1:24,0:24:6.74:7,0,364	0/0:31,0:30:78.25:0,78,3182	0/0:36,0:36:91.55:0,92,3949	0/1:30,0:30:56.19:56,0,496	0/1:18,0:18:24.31:24,0,314	0/0:34,0:34:81.28:0,81,3602	0/1:18,0:18:99:193,0,204	0/1:30,0:29:99:146,0,653	0/1:25,0:25:75.42:75,0,981	0/1:30,0:30:4.34:4,0,927	0/1:30,0:30:50.11:50,0,215	0/0:23,0:22:46.97:0,47,1706	0/0:24,0:24:53.73:0,54,2292	0/1:22,0:22:6.12:6,0,221	0/0:38,0:38:99:0,102,4110	0/0:32,0:31:72.68:0,73,2918	0/0:18,0:18:35.99:0,36,1524
chr10	18818685	.	GTATT	G	1963.94	PASS	AB=0.833;AC=19;AF=0.339;AN=56;BaseQRankSum=12.787;DP=756;FS=1.523;HRun=0;HaplotypeScore=261.9821;InbreedingCoeff=0.8060;MQ=52.36;MQ0=11;MQRankSum=-8.868;QD=8.54;ReadPosRankSum=3.946;VQSLOD=2.1176;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:38,0:38:2.44:155,2,0	0/0:3,0:3:6.02:0,6,136	0/0:50,1:29:76.47:0,76,1711	0/0:42,0:28:78.27:0,78,1750	0/0:17,0:17:45.10:0,45,993	1/1:15,7:22:15.76:249,16,0	1/1:12,3:15:6:61,6,0	0/0:40,0:38:95.19:0,95,1281	1/1:18,0:18:32.68:350,33,0	0/0:37,0:36:99:0,99,2619	0/0:19,0:19:57.18:0,57,1455	1/1:18,6:24:15.71:190,16,0	0/0:33,0:32:81.28:0,81,2028	0/0:39,0:38:99:0,104,2558	0/1:24,6:30:26.35:292,0,26	1/1:7,0:16:10.89:170,11,0	0/0:33,0:33:90.25:0,90,2304	1/1:10,0:18:6.28:275,6,0	0/0:26,0:25:68.17:0,68,868	0/0:22,0:22:61.12:0,61,732	0/0:31,0:31:70.08:0,70,906	1/1:21,9:30:28.44:334,28,0	0/0:21,0:20:51.17:0,51,1205	0/0:24,0:24:51.17:0,51,1321	1/1:18,1:19:3.90:85,4,0	0/0:36,0:36:99:0,100,2579	0/0:34,0:33:78.69:0,79,1922	0/0:18,0:18:38.98:0,39,927
chr10	18818695	.	GTATT	G	1253.32	PASS	AB=0.919;AC=16;AF=0.286;AN=56;BaseQRankSum=11.343;DP=774;FS=0.000;HRun=0;HaplotypeScore=263.5951;InbreedingCoeff=0.6783;MQ=51.32;MQ0=12;MQRankSum=-10.678;QD=6.67;ReadPosRankSum=3.125;VQSLOD=2.3506;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:5.65:0,6,321	0/0:4,0:4:6.02:0,6,119	0/0:46,0:28:67.17:0,67,1186	0/0:40,0:25:71.27:0,71,1572	0/0:19,0:18:40.96:0,41,664	1/1:12,7:19:11.19:168,11,0	1/1:11,3:14:3.01:37,3,0	0/0:46,0:44:78.78:0,79,1629	0/1:23,0:23:33.91:34,0,113	0/0:38,0:37:92.30:0,92,1757	0/0:18,0:18:54.04:0,54,839	1/1:16,6:22:15.70:170,16,0	0/0:34,0:33:50.71:0,51,1269	0/0:38,0:37:79.36:0,79,1733	0/1:25,6:31:21.48:236,0,21	1/1:12,0:12:4.14:121,4,0	0/0:32,0:32:87.12:0,87,1472	1/1:17,0:18:41.66:349,42,0	0/0:26,0:25:69.11:0,69,1118	0/0:24,0:24:39.51:0,40,934	0/0:33,0:32:30.13:0,30,1071	1/1:19,9:28:22.45:281,22,0	0/0:23,0:22:34.18:0,34,857	0/0:25,0:25:54.17:0,54,937	1/1:20,1:21:0.89:36,1,0	0/0:36,0:36:66.12:0,66,1725	0/0:36,0:35:75.30:0,75,1262	0/0:18,0:18:35.15:0,35,628
chr10	18818699	.	T	TTG	3820.96	PASS	AB=0.696;AC=22;AF=0.393;AN=56;BaseQRankSum=1.384;DP=779;FS=0.000;HRun=0;HaplotypeScore=236.4612;InbreedingCoeff=0.7495;MQ=52.14;MQ0=12;MQRankSum=-4.994;QD=12.87;ReadPosRankSum=-2.837;VQSLOD=2.8534;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:49:48.28:0,48,395	0/0:5,0:5:5.36:0,5,22	0/0:48,0:28:35.62:0,36,380	0/0:44,0:28:48.10:0,48,547	0/0:17,0:16:26.85:0,27,112	1/1:18,0:18:14.81:141,15,0	1/1:14,0:14:2.94:18,3,0	1/1:36,12:46:66.21:994,66,0	0/0:23,0:23:59.90:0,60,575	0/0:38,0:37:29.24:0,29,224	0/0:18,0:18:23.53:0,24,95	1/1:21,0:21:20.78:197,21,0	0/0:34,0:33:61.23:0,61,253	0/0:35,0:35:74.03:0,74,306	1/1:31,0:31:0.74:160,1,0	1/1:13,0:13:1.24:3,1,0	0/0:32,0:32:58.81:0,59,242	1/1:17,0:17:10.42:59,10,0	0/1:14,11:25:4.66:588,0,5	1/1:6,19:25:57.19:890,57,0	0/1:20,14:33:9.35:522,0,9	1/1:30,0:29:17.72:139,18,0	0/0:22,0:21:32.21:0,32,135	0/0:26,0:26:37.50:0,37,155	1/1:20,0:20:9.01:110,9,0	0/0:34,0:34:17.40:0,17,223	0/0:35,0:34:48.36:0,48,201	0/0:21,0:21:23.92:0,24,98
chr10	18818705	.	G	GTA	2931.74	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=8.135;DP=780;FS=1.693;HRun=0;HaplotypeScore=233.2361;InbreedingCoeff=0.7298;MQ=52.39;MQ0=11;MQRankSum=-8.170;QD=9.87;ReadPosRankSum=0.784;VQSLOD=3.4849;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:65.86:0,66,740	0/0:5,0:5:11.88:0,12,100	0/0:44,0:25:72.47:0,72,887	0/0:44,0:28:71.78:0,72,930	0/0:21,0:20:35.92:0,36,349	1/1:11,10:21:23.28:272,23,0	1/1:5,8:13:3.01:36,3,0	0/1:45,0:43:99:345,0,290	0/0:24,0:24:63.19:0,63,830	0/0:37,0:36:94.02:0,94,948	0/0:20,0:20:33.04:0,33,331	1/1:8,16:24:23.10:321,23,0	0/0:33,0:32:71.82:0,72,738	0/0:38,0:37:87.02:0,87,876	1/1:14,17:32:24.35:357,24,0	1/1:16,0:16:13.09:128,13,0	0/0:32,0:32:72.12:0,72,730	1/1:17,0:17:29.83:267,30,0	0/1:21,0:20:99:257,0,140	1/1:24,0:24:56.87:509,57,0	0/1:32,0:31:99:193,0,186	1/1:17,14:31:24.67:273,25,0	0/0:20,0:19:38.98:0,39,389	0/0:25,0:25:50.82:0,51,519	1/1:3,16:20:11.97:182,12,0	0/0:38,0:38:96.61:0,97,1000	0/0:35,0:34:71.94:0,72,682	0/0:21,0:21:36.03:0,36,346
chr10	18818711	.	GTGTA	G	931.63	PASS	AB=0.983;AC=20;AF=0.357;AN=56;BaseQRankSum=0.867;DP=796;FS=0.525;HRun=0;HaplotypeScore=264.0442;InbreedingCoeff=-0.1078;MQ=53.71;MQ0=11;MQRankSum=-0.043;QD=1.94;ReadPosRankSum=-6.540;VQSLOD=0.1445;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:70.92:0,71,1048	1/1:3,2:5:4.53:67,5,0	0/0:44,0:26:67.70:0,68,1190	0/0:46,0:31:51.59:0,52,1470	0/1:22,2:23:1.04:60,0,1	0/1:23,0:23:14.98:15,0,100	1/1:16,0:16:2.94:18,3,0	0/0:38,0:36:27.17:0,27,1163	0/0:25,0:25:68.02:0,68,892	0/1:37,1:37:40.71:206,0,41	0/1:18,1:19:2.30:48,0,2	0/1:24,0:24:30.19:30,0,90	0/1:32,2:33:3.30:158,0,3	0/1:39,0:38:20.55:21,0,35	0/1:32,0:32:6.46:6,0,214	0/0:19,0:19:19.89:0,20,81	0/1:29,1:30:13.95:35,0,14	0/1:20,0:20:46.68:60,0,47	0/0:23,0:22:36.66:0,37,831	0/0:27,0:27:38.74:0,39,759	0/1:31,0:30:16.82:17,0,649	0/1:35,0:34:49.88:50,0,50	0/1:21,0:20:5.65:6,0,6	0/0:24,0:24:12.40:0,12,23	0/0:22,0:22:8.74:0,9,98	0/1:38,0:38:61.73:248,0,62	0/1:31,1:31:9.85:42,0,10	0/1:19,0:19:1.93:2,0,3
chr10	18818713	.	GTA	G	9322.13	PASS	AB=1.000;AC=34;AF=0.607;AN=56;BaseQRankSum=-2.024;DP=792;FS=1.102;HRun=0;HaplotypeScore=214.5392;InbreedingCoeff=0.4190;MQ=53.42;MQ0=10;MQRankSum=5.570;QD=16.95;ReadPosRankSum=6.300;VQSLOD=4.3328;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:70.44:0,70,869	1/1:2,3:5:11.95:131,12,0	0/0:45,0:27:72.93:0,73,1001	0/0:44,0:29:47.97:0,48,1118	1/1:3,21:23:36:485,36,0	0/1:23,0:23:18.69:19,0,25	1/1:18,0:18:2.94:18,3,0	0/0:39,0:37:30.97:0,31,815	0/0:25,0:25:69.07:0,69,841	1/1:3,34:36:81.03:1196,81,0	1/1:1,17:18:27.06:386,27,0	0/1:24,0:24:21.01:32,0,21	1/1:3,30:32:71.94:991,72,0	1/1:2,38:39:84.18:1239,84,0	0/1:32,0:32:11.18:11,0,68	0/1:19,0:19:0.40:112,0,0	1/1:1,29:30:66.19:979,66,0	0/1:20,0:20:33.92:94,0,34	0/0:21,0:21:15.93:0,16,523	0/1:27,0:27:19.63:20,0,485	0/1:31,0:30:16.79:17,0,442	0/1:35,0:34:4.95:51,0,5	1/1:2,19:20:38.92:557,39,0	1/1:0,24:24:41.89:639,42,0	0/0:23,0:23:7.94:0,8,39	1/1:5,33:38:57.90:1107,58,0	1/1:3,29:31:57.14:828,57,0	1/1:1,18:19:27.09:410,27,0
chr10	18819218	.	CAGA	C	6825.79	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=17.843;DP=756;FS=2.429;HRun=0;HaplotypeScore=168.8934;InbreedingCoeff=0.9998;MQ=87.51;MQ0=0;MQRankSum=-16.715;QD=37.30;ReadPosRankSum=-1.080;VQSLOD=4.9791;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,141,3069	0/0:21,0:21:60.20:0,60,1317	0/0:37,0:37:95.42:0,95,2037	0/0:31,0:30:84.21:0,84,1649	0/0:26,0:26:78.27:0,78,1741	1/1:1,21:22:42.14:694,42,0	1/1:7,33:40:75.17:1168,75,0	0/0:37,0:37:99:0,105,2256	0/0:29,0:29:87.29:0,87,1929	0/0:28,0:28:84.28:0,84,1854	0/0:18,0:18:54.19:0,54,1224	1/1:2,29:31:84.27:1357,84,0	0/0:44,0:44:99:0,126,2797	0/0:31,0:31:84.29:0,84,1889	1/1:1,20:21:60.21:998,60,0	1/1:2,14:16:39.13:644,39,0	0/0:37,0:37:99:0,102,2310	1/1:3,19:22:54.18:893,54,0	0/0:20,0:20:57.20:0,57,1292	0/0:18,0:18:51.18:0,51,1156	0/0:29,0:29:87.28:0,87,1910	1/1:3,13:16:27.08:424,27,0	0/0:17,0:17:48.16:0,48,1086	0/0:29,0:29:84.29:0,84,1882	1/1:0,15:15:39.13:648,39,0	0/0:31,0:31:90.30:0,90,1989	0/0:29,0:29:81.28:0,81,1826	0/0:12,0:12:36.12:0,36,786
chr10	18819237	.	C	CACTG	11095.11	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=17.633;DP=789;FS=5.843;HRun=0;HaplotypeScore=184.0008;InbreedingCoeff=0.9998;MQ=84.43;MQ0=0;MQRankSum=-16.427;QD=58.09;ReadPosRankSum=-1.156;VQSLOD=5.2350;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:56:99:0,153,2777	0/0:24,0:24:69.22:0,69,1245	0/0:28,0:28:62.74:0,63,1085	0/0:37,0:36:88.53:0,89,1536	0/0:23,0:23:69.24:0,69,1288	1/1:5,15:21:51.18:1319,51,0	1/1:11,24:37:66.14:1610,66,0	0/0:35,0:35:96.31:0,96,1730	0/0:36,0:36:99:0,99,1734	0/0:33,0:33:81.27:0,81,1477	0/0:23,0:23:63.22:0,63,1165	1/1:5,27:34:81.28:2133,81,0	0/0:42,0:42:99:0,117,2134	0/0:31,0:31:84.27:0,84,1535	1/1:6,19:25:60.21:1587,60,0	1/1:7,12:19:42.14:1078,42,0	0/0:35,0:35:99:0,99,1782	1/1:7,12:20:48.10:1232,48,0	0/0:27,0:27:75.24:0,75,1354	0/0:19,0:19:54.17:0,54,975	0/0:31,0:31:87.25:0,87,1544	1/1:4,12:17:27.09:701,27,0	0/0:15,0:15:45.15:0,45,840	0/0:25,0:25:66.21:0,66,1200	1/1:2,16:18:54.19:1434,54,0	0/0:31,0:31:78.74:0,79,1456	0/0:30,0:30:87.30:0,87,1613	0/0:17,0:17:50.54:0,51,904
chr10	18819299	.	ACT	A	1527.38	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.885;DP=773;FS=0.624;HRun=0;HaplotypeScore=123.4040;InbreedingCoeff=0.9994;MQ=72.40;MQ0=3;MQRankSum=-3.025;QD=37.25;ReadPosRankSum=3.684;VQSLOD=5.6889;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:48:99:0,135,2547	0/0:18,0:18:54.17:0,54,999	0/0:20,0:19:51.17:0,51,870	0/0:19,0:19:27.22:0,27,778	0/0:28,0:28:84.26:0,84,1553	0/0:19,0:19:48.16:0,48,916	0/0:38,0:38:90.23:0,90,1661	0/0:37,0:37:99:0,108,1982	0/0:30,0:30:90.31:0,90,1720	0/0:32,0:32:96.32:0,96,1825	0/0:26,0:26:75.22:0,75,1341	0/0:37,0:37:81.28:0,81,1560	0/0:40,0:40:99:0,120,2184	0/0:33,0:33:99:0,99,1908	0/0:35,0:35:87.21:0,87,1642	1/1:2,23:23:69.23:1054,69,0	0/0:31,0:31:90.28:0,90,1689	1/1:2,14:16:39.13:595,39,0	0/0:26,0:26:78.25:0,78,1463	0/0:26,0:26:72.24:0,72,1347	0/0:40,0:40:99:0,117,2172	0/0:21,0:21:54.17:0,54,1000	0/0:16,0:16:48.15:0,48,883	0/0:19,0:19:54.17:0,54,998	0/0:29,0:29:78.21:0,78,1401	0/0:23,0:23:69.24:0,69,1332	0/0:24,0:24:72.19:0,72,1228	0/0:16,0:16:48.08:0,48,787
chr10	18819414	.	AAG	A	6348.23	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=18.154;DP=787;FS=3.945;HRun=0;HaplotypeScore=118.6558;InbreedingCoeff=0.9668;MQ=83.75;MQ0=0;MQRankSum=-5.696;QD=35.07;ReadPosRankSum=3.665;VQSLOD=7.3131;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,135,2572	0/0:16,0:16:48.16:0,48,896	0/0:35,0:34:90.29:0,90,1520	0/0:17,0:17:41.11:0,41,758	0/0:15,0:15:42.13:0,42,755	1/1:2,14:16:33.06:457,33,0	1/1:0,28:28:66.22:1010,66,0	0/0:42,0:42:99:0,123,2225	0/0:28,0:28:81.26:0,81,1531	0/0:27,0:27:81.27:0,81,1499	0/0:21,0:21:60.21:0,60,1158	1/1:2,22:24:2.26:813,2,0	0/0:40,0:40:99:0,120,2170	0/0:25,0:25:72.25:0,72,1378	1/1:0,24:24:63.21:963,63,0	1/1:3,21:24:66.03:954,66,0	0/0:26,0:26:78.25:0,78,1472	1/1:0,26:26:66.22:1010,66,0	0/0:27,0:27:78.23:0,78,1396	0/0:32,0:32:93.32:0,93,1785	0/0:74,0:74:99:0,223,4127	1/1:0,19:19:36.12:551,36,0	0/0:15,0:15:39.13:0,39,752	0/0:34,0:34:99:0,102,1889	1/1:1,19:20:42.06:591,42,0	0/0:34,0:34:99:0,99,1791	0/0:35,0:35:99:0,105,1975	0/0:18,0:18:54.16:0,54,986
chr10	18820607	.	AT	A	4276.47	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=16.478;DP=557;FS=0.000;HRun=8;HaplotypeScore=72.9605;InbreedingCoeff=0.9987;MQ=79.22;MQ0=0;MQRankSum=-0.784;QD=25.16;ReadPosRankSum=0.247;VQSLOD=5.3689;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:96.27:0,96,1145	0/0:9,0:9:21.06:0,21,253	0/0:13,0:12:30.04:0,30,330	0/0:18,0:19:30.36:0,30,331	0/0:28,0:28:84.22:0,84,998	1/1:2,16:18:45.07:434,45,0	1/1:0,12:12:36.06:348,36,0	0/0:32,0:32:78.22:0,78,921	0/0:23,0:23:66.20:0,66,787	0/0:28,0:28:81.24:0,81,966	0/0:15,0:15:45.14:0,45,543	1/1:1,17:18:51.08:493,51,0	0/0:10,0:10:24.07:0,24,280	0/0:11,0:11:33.09:0,33,384	1/1:5,25:30:66.10:637,66,0	1/1:1,26:27:75.12:724,75,0	0/0:17,0:17:42.11:0,42,494	1/1:2,20:22:60.05:569,60,0	0/0:17,0:17:39.11:0,39,461	0/0:18,0:18:51.14:0,51,604	0/0:13,0:13:35.94:0,36,411	1/1:2,16:18:42.06:405,42,0	0/0:13,0:13:36.10:0,36,421	0/0:16,0:16:48.10:0,48,553	1/1:1,24:25:69.11:666,69,0	0/0:27,0:27:75.23:0,75,901	0/0:27,0:27:72.18:0,72,853	0/0:16,0:16:48.15:0,48,579
chr10	18820846	.	TA	T	4635.28	PASS	AB=0.976;AC=46;AF=0.821;AN=56;BaseQRankSum=8.258;DP=618;FS=0.000;HRun=1;HaplotypeScore=121.3060;InbreedingCoeff=-0.2060;MQ=84.00;MQ0=0;MQRankSum=-2.333;QD=7.50;ReadPosRankSum=11.291;VQSLOD=0.2918;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:24:35.24:202,35,0	0/1:6,0:6:9.22:33,0,9	0/1:20,3:23:69.71:123,0,70	0/1:18,3:21:17.39:202,0,17	0/1:20,0:20:7.46:114,0,7	1/1:21,0:21:29.51:199,30,0	1/1:12,0:12:27.47:137,27,0	1/1:36,0:36:27.61:215,28,0	1/1:21,0:21:28.78:179,29,0	0/1:28,0:28:12.65:112,0,13	0/1:16,0:16:7.78:87,0,8	1/1:31,0:31:23.25:259,23,0	0/1:22,0:22:15.79:137,0,16	1/1:22,0:22:32.95:200,33,0	1/1:41,0:41:4.58:321,5,0	1/1:21,0:21:43.74:176,44,0	0/1:21,0:21:13.33:129,0,13	1/1:24,0:24:40.14:225,40,0	0/1:23,0:23:0.39:101,0,0	1/1:20,0:20:13.29:129,13,0	0/1:31,0:31:61.26:157,0,61	1/1:13,0:13:5.78:113,6,0	1/1:17,0:17:12.71:119,13,0	1/1:16,0:16:38.14:143,38,0	1/1:29,0:29:48.88:286,49,0	1/1:26,0:26:31.60:170,32,0	1/1:25,0:24:65.57:274,66,0	1/1:8,0:8:18.86:93,19,0
chr10	18820956	.	C	CACCTGTG	12647.40	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=11.548;DP=618;FS=82.494;HRun=0;HaplotypeScore=147.8963;InbreedingCoeff=0.9813;MQ=78.31;MQ0=1;MQRankSum=-15.784;QD=80.05;ReadPosRankSum=-0.286;VQSLOD=1.9940;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,135,3530	0/0:2,0:2:6.01:0,6,104	0/0:15,0:15:24.43:0,24,899	0/0:32,0:32:92.68:0,93,2255	0/0:26,0:26:72.22:0,72,1782	1/1:6,11:19:45.15:1680,45,0	1/1:14,11:26:51.18:1918,51,0	0/0:24,0:24:72.24:0,72,1791	0/0:22,0:22:66.20:0,66,1575	0/0:24,0:24:66.23:0,66,1658	0/0:13,0:13:33.10:0,33,865	1/1:6,14:21:39.13:1526,39,0	0/0:18,0:18:51.16:0,51,1226	0/0:16,0:16:45.14:0,45,1118	1/1:4,20:29:57.20:2239,57,0	1/1:3,10:18:30.10:1111,30,0	0/0:29,0:29:87.26:0,87,2139	1/1:5,11:16:39.13:1523,39,0	0/0:22,0:22:66.23:0,66,1721	0/0:20,0:20:57.18:0,57,1422	0/0:57,0:57:99:0,163,4059	1/1:5,5:10:27.09:1024,27,0	0/0:7,0:7:21.07:0,21,552	0/0:30,0:30:87.30:0,87,2210	1/1:6,12:18:42.14:1625,42,0	0/0:20,0:20:60.21:0,60,1567	0/0:23,0:23:66.23:0,66,1716	0/0:12,0:12:36.12:0,36,944
chr10	18821089	.	GGT	G	860.35	PASS	AB=0.867;AC=14;AF=0.250;AN=56;BaseQRankSum=2.153;DP=539;FS=0.516;HRun=0;HaplotypeScore=142.3363;InbreedingCoeff=0.7270;MQ=61.78;MQ0=3;MQRankSum=-2.772;QD=7.17;ReadPosRankSum=0.529;VQSLOD=2.9131;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,139,2102	0/0:4,0:4:10.98:0,11,104	0/0:22,0:14:29.14:0,29,360	0/0:19,0:15:23.85:0,24,341	0/0:18,0:18:39.53:0,40,348	1/1:12,0:12:3.26:68,3,0	1/1:25,0:25:11.73:193,12,0	0/0:21,0:21:60.02:0,60,655	0/0:30,0:30:89.88:0,90,1386	0/0:28,0:27:67.26:0,67,505	0/0:17,0:17:38.29:0,38,374	1/1:13,1:14:8.43:119,8,0	0/0:20,0:20:46.17:0,46,434	0/0:22,0:22:36.11:0,36,378	0/1:8,0:8:0.53:44,0,1	0/1:6,4:11:6.80:117,0,7	0/0:29,0:29:59:0,59,511	1/1:10,1:11:4.78:185,5,0	0/0:17,0:17:50.31:0,50,438	0/0:15,0:14:34.37:0,34,320	0/0:23,0:23:48.01:0,48,543	1/1:15,2:17:1.82:125,2,0	0/0:14,0:14:29.74:0,30,267	0/0:15,0:15:21.66:0,22,222	1/1:20,2:22:8.05:173,8,0	0/0:24,0:24:61.05:0,61,601	0/0:24,0:23:60.81:0,61,530	0/0:5,0:5:11.98:0,12,99
chr10	18821090	.	G	GTT	3850.97	PASS	AB=0.963;AC=45;AF=0.804;AN=56;BaseQRankSum=4.822;DP=548;FS=7.509;HRun=13;HaplotypeScore=155.0294;InbreedingCoeff=0.5657;MQ=59.57;MQ0=3;MQRankSum=-4.161;QD=8.93;ReadPosRankSum=-2.331;VQSLOD=0.5018;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:50:77.94:0,78,695	1/1:6,0:6:6.52:110,7,0	0/0:17,0:11:6.75:0,7,22	0/0:19,0:15:9.96:0,10,81	1/1:17,0:17:24.19:186,24,0	1/1:10,0:10:8.85:57,9,0	0/1:25,0:25:11.12:53,0,11	1/1:17,5:23:35.80:372,36,0	0/0:28,0:29:41.47:0,41,476	1/1:26,0:25:14.46:160,14,0	0/1:14,1:16:3.03:139,0,3	1/1:14,0:14:18.17:90,18,0	1/1:21,0:21:22.12:159,22,0	1/1:22,0:22:14.20:106,14,0	1/1:8,0:8:8.99:45,9,0	0/1:13,0:13:3.13:66,0,3	1/1:29,0:29:5.14:144,5,0	1/1:11,0:11:10.16:54,10,0	1/1:21,0:19:25.81:260,26,0	1/1:8,11:20:41.56:462,42,0	1/1:5,15:21:27.08:354,27,0	1/1:17,0:17:21.51:97,22,0	1/1:14,1:15:17.13:162,17,0	1/1:16,0:16:11.76:99,12,0	1/1:23,0:23:6.93:98,7,0	1/1:24,2:26:48.26:428,48,0	1/1:24,0:23:8.68:94,9,0	1/1:6,0:6:6:54,6,0
chr10	18821097	.	T	TTGTTGTTGTTGTTTTG	14056.33	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=-2.118;DP=582;FS=1.245;HRun=0;HaplotypeScore=305.2702;InbreedingCoeff=0.7497;MQ=53.21;MQ0=6;MQRankSum=-8.938;QD=85.19;ReadPosRankSum=5.489;VQSLOD=4.1542;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,139,4074	0/0:8,0:8:20.93:0,21,374	0/0:17,0:6:12.02:0,12,275	0/1:17,0:13:2.44:2,0,392	0/0:22,0:22:46.74:0,47,713	1/1:12,3:15:38.95:2025,39,0	1/1:26,2:28:60.03:2341,60,0	0/0:18,0:18:48.12:0,48,1049	0/0:27,0:27:75.23:0,75,2662	0/0:36,0:35:85.59:0,86,1333	0/0:16,0:16:38.87:0,39,619	1/1:12,4:16:45.11:1928,45,0	0/0:22,0:22:42.08:0,42,658	0/0:20,0:20:38.48:0,38,626	1/1:12,2:14:38.67:1583,39,0	0/1:14,0:14:99:330,0,129	0/0:24,0:24:47.87:0,48,720	0/1:11,0:11:60.11:131,0,60	0/0:17,0:15:44.97:0,45,546	0/0:21,0:20:53.61:0,54,849	0/0:18,0:18:33.09:0,33,853	1/1:21,3:23:59.94:2378,60,0	0/0:19,0:19:38.93:0,39,519	0/0:17,0:17:20.79:0,21,284	1/1:21,5:26:78.25:3338,78,0	0/0:29,0:28:77.85:0,78,1163	0/0:25,0:24:59.95:0,60,1267	0/0:10,0:10:26.94:0,27,353
chr10	18821098	.	T	TG	2017.39	PASS	AB=0.719;AC=7;AF=0.125;AN=56;BaseQRankSum=9.478;DP=578;FS=3.334;HRun=0;HaplotypeScore=148.3800;InbreedingCoeff=0.1553;MQ=53.13;MQ0=6;MQRankSum=-7.733;QD=16.54;ReadPosRankSum=7.031;VQSLOD=5.2513;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,129,1539	0/0:8,0:8:20.75:0,21,148	0/0:17,0:6:15:0,15,142	0/0:17,0:13:5.52:0,6,162	0/0:21,0:21:46.47:0,46,284	0/1:10,5:15:60.03:179,0,60	0/1:14,13:27:17.19:466,0,17	0/0:18,0:18:46.07:0,46,328	0/0:27,0:27:76.64:0,77,915	0/0:36,0:35:83.51:0,84,611	0/0:16,0:16:32.41:0,32,237	1/1:9,7:16:11.70:399,12,0	0/0:22,0:22:41.06:0,41,298	0/0:20,0:20:34.83:0,35,238	0/1:11,4:15:78.25:154,0,78	0/0:14,0:14:27.71:0,28,232	0/0:25,0:25:41.39:0,41,286	0/0:11,0:11:18.59:0,19,109	0/0:17,0:15:43.80:0,44,324	0/0:21,0:20:42.33:0,42,262	0/0:18,0:18:32.53:0,33,220	0/1:13,10:22:24:418,0,24	0/0:18,0:18:33.37:0,33,211	0/0:15,0:15:15.81:0,16,88	0/1:14,12:26:25.36:535,0,25	0/0:29,0:28:71.02:0,71,489	0/0:25,0:24:58.49:0,58,447	0/0:10,0:10:26.79:0,27,213
chr10	18821101	.	TTTG	T	2069.83	PASS	AB=0.981;AC=24;AF=0.429;AN=56;BaseQRankSum=-4.706;DP=580;FS=0.367;HRun=0;HaplotypeScore=161.4498;InbreedingCoeff=0.4887;MQ=53.01;MQ0=6;MQRankSum=2.065;QD=6.95;ReadPosRankSum=-6.775;VQSLOD=0.6564;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:62.15:0,62,1500	0/1:7,1:8:6.48:99,0,6	0/0:18,0:7:5.45:0,5,64	0/1:18,0:14:8.87:9,0,65	1/1:21,1:22:0.70:188,1,0	0/0:14,0:14:36.55:0,37,268	0/0:24,0:24:49.55:0,50,426	0/1:20,0:20:51.76:52,0,363	0/0:31,0:31:75.09:0,75,1162	1/1:29,5:33:16.18:451,16,0	1/1:14,2:16:8.51:158,9,0	0/0:15,0:15:38.87:0,39,302	0/1:21,0:21:0.05:91,0,0	1/1:19,1:20:19.55:179,20,0	0/0:15,0:15:44.48:0,44,325	0/0:14,0:14:19.09:0,19,251	1/1:23,2:25:3.86:164,4,0	0/1:11,0:11:11.22:11,0,121	0/0:18,0:16:5.03:0,5,285	0/1:21,0:20:4.37:4,0,454	0/0:17,0:17:13.36:0,13,286	0/0:23,0:22:44.06:0,44,374	1/1:16,2:18:4.33:131,4,0	0/0:16,0:16:4.15:0,4,16	0/0:26,0:26:54.21:0,54,540	1/1:28,0:27:33.99:330,34,0	1/1:25,1:25:20.98:290,21,0	1/1:10,0:10:7.64:100,8,0
chr10	18821103	.	TG	T	3716.14	PASS	AB=0.980;AC=31;AF=0.554;AN=56;BaseQRankSum=-3.311;DP=578;FS=2.008;HRun=1;HaplotypeScore=139.5278;InbreedingCoeff=0.4701;MQ=53.86;MQ0=6;MQRankSum=0.075;QD=10.24;ReadPosRankSum=-5.788;VQSLOD=-0.6109;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:1.01:0,1,784	1/1:8,0:8:19.67:147,20,0	0/1:18,0:8:21.25:21,0,65	0/1:18,1:15:11.85:39,0,12	1/1:21,1:22:48.58:344,49,0	0/0:16,0:16:32.43:0,32,171	0/0:22,0:22:36.70:0,37,275	0/1:20,0:20:58.42:58,0,159	0/0:31,0:31:54.87:0,55,662	1/1:30,2:31:73.46:569,73,0	1/1:14,1:15:29.55:226,30,0	0/0:15,0:15:33.26:0,33,169	1/1:19,0:19:27.65:180,28,0	1/1:22,0:22:31.11:245,31,0	0/0:15,0:15:41.30:0,41,228	0/1:13,0:13:31.25:31,0,106	1/1:26,1:27:45.28:314,45,0	0/1:11,0:11:18.37:18,0,46	0/1:18,0:16:15.56:16,0,209	0/1:19,2:20:8.54:9,0,228	0/0:17,0:17:25.89:0,26,144	0/0:23,0:22:42.95:0,43,223	1/1:16,2:18:39.93:263,40,0	1/1:15,0:15:10.03:68,10,0	0/0:26,0:26:60.37:0,60,335	1/1:27,1:27:74.41:570,74,0	1/1:27,0:26:56.84:427,57,0	1/1:9,1:10:25.83:171,26,0
chr10	18821106	.	T	TTTG	3121.48	PASS	AB=0.866;AC=27;AF=0.482;AN=56;BaseQRankSum=-0.103;DP=597;FS=5.409;HRun=0;HaplotypeScore=171.3799;InbreedingCoeff=0.0733;MQ=54.82;MQ0=6;MQRankSum=-0.137;QD=7.86;ReadPosRankSum=2.099;VQSLOD=3.0297;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,128,1791	1/1:3,0:8:8.74:125,9,0	0/0:18,0:8:17.93:0,18,218	0/0:21,0:17:27.38:0,27,249	1/1:5,2:22:11.97:344,12,0	0/1:16,0:16:28.04:28,0,231	0/1:24,0:24:0.59:1,0,271	0/0:22,0:22:44.41:0,44,577	0/0:31,0:31:92.53:0,93,1486	1/1:14,17:34:47.90:563,48,0	0/1:9,4:16:24.51:141,0,25	0/1:15,0:15:57.98:58,0,121	0/1:8,1:19:7.33:109,0,7	0/1:9,9:23:9.32:177,0,9	0/1:15,0:15:1.44:1,0,272	0/1:13,1:14:99:130,0,160	0/1:13,2:26:56.32:260,0,56	0/1:10,0:10:35.13:35,0,87	0/0:18,0:16:44.63:0,45,553	0/0:24,0:23:59.04:0,59,685	0/0:17,0:17:31.35:0,31,456	0/1:22,0:22:49.96:50,0,277	1/1:7,13:22:3.36:221,3,0	1/1:3,9:17:4.40:173,4,0	0/1:26,0:26:48.07:48,0,332	1/1:12,1:28:5.54:551,6,0	0/1:18,1:26:80.49:193,0,80	1/1:10,0:10:18.18:93,18,0
chr10	18821107	.	T	TTG	445.79	PASS	AB=0.966;AC=13;AF=0.232;AN=56;BaseQRankSum=5.869;DP=600;FS=4.138;HRun=0;HaplotypeScore=169.8080;InbreedingCoeff=-0.1590;MQ=54.76;MQ0=6;MQRankSum=-2.060;QD=1.71;ReadPosRankSum=6.317;VQSLOD=2.1109;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,100,1590	0/0:8,0:8:1.14:0,1,37	0/0:17,0:7:14.93:0,15,185	0/0:21,0:18:15.11:0,15,208	0/1:22,0:22:43.82:44,0,90	0/0:16,0:16:13.01:0,13,308	0/0:23,0:23:26.71:0,27,347	0/0:22,0:22:42.34:0,42,542	0/0:32,0:32:92.52:0,93,1350	0/1:33,0:32:59.70:60,0,140	0/1:16,0:16:55.66:56,0,62	0/0:15,0:15:0.92:0,1,164	0/1:18,0:18:34.98:41,0,35	0/1:24,0:24:26.71:27,0,65	0/0:15,0:15:27.40:0,27,443	0/1:11,3:14:74.62:75,0,240	0/1:27,1:28:63.51:64,0,95	0/1:8,2:10:53.31:53,0,124	0/0:19,0:17:43.78:0,44,529	0/0:25,0:24:60.19:0,60,654	0/0:17,0:17:33.05:0,33,391	0/0:23,0:22:12.85:0,13,395	0/1:23,0:23:48.44:48,0,82	1/1:17,0:17:9.31:64,9,0	0/0:26,0:26:24.63:0,25,427	0/1:28,0:27:56.40:56,0,103	0/1:28,0:27:13.07:13,0,185	0/0:10,0:10:19.40:0,19,129
chr10	18821112	.	G	GT	1544.36	PASS	AB=0.895;AC=13;AF=0.232;AN=56;BaseQRankSum=9.026;DP=578;FS=9.518;HRun=7;HaplotypeScore=142.0599;InbreedingCoeff=0.5274;MQ=55.45;MQ0=6;MQRankSum=-9.108;QD=9.42;ReadPosRankSum=3.954;VQSLOD=0.8095;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:79.50:0,79,1014	0/0:9,0:9:19.52:0,20,165	0/0:16,0:8:14.91:0,15,152	0/0:19,0:16:11.91:0,12,150	0/0:23,0:23:46.65:0,47,416	0/1:16,2:18:4.26:115,0,4	1/1:16,7:23:2.66:275,3,0	0/0:22,0:22:47.79:0,48,514	0/0:32,0:32:82.95:0,83,847	0/0:31,0:30:56.29:0,56,554	0/0:18,0:18:13.48:0,13,176	1/1:9,5:14:18.51:273,19,0	0/0:18,0:18:3.81:0,4,51	0/1:25,0:25:3.42:3,0,180	0/1:14,3:17:10.87:129,0,11	0/1:11,3:14:4.04:139,0,4	0/0:26,0:26:33.05:0,33,321	0/1:7,1:9:4.78:48,0,5	0/0:17,0:15:32.91:0,33,354	0/0:23,0:22:47.72:0,48,499	0/0:17,0:17:27.05:0,27,283	1/1:15,6:20:10.28:292,10,0	0/0:23,0:23:34.05:0,34,308	0/0:15,0:15:8.70:0,9,67	1/1:14,9:23:25.21:434,25,0	0/0:28,0:27:60.06:0,60,556	0/0:24,0:23:11.02:0,11,102	0/0:9,0:9:20.20:0,20,213
chr10	18821116	.	TTG	T	2797.76	PASS	AB=0.793;AC=15;AF=0.268;AN=56;BaseQRankSum=6.266;DP=576;FS=55.588;HRun=0;HaplotypeScore=138.6521;InbreedingCoeff=0.0125;MQ=58.11;MQ0=6;MQRankSum=-9.896;QD=12.01;ReadPosRankSum=2.289;VQSLOD=1.4772;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:86.88:0,87,1747	0/0:9,0:9:11.98:0,12,229	0/0:16,0:8:17.90:0,18,288	0/0:20,0:18:10.10:0,10,315	0/0:22,0:22:37.07:0,37,639	1/1:2,16:18:14.88:432,15,0	0/1:11,11:22:36.37:297,0,36	0/0:24,0:24:36.67:0,37,882	0/0:36,0:36:99:0,102,1510	0/0:29,0:29:33.69:0,34,824	0/0:17,0:17:24.72:0,25,391	0/1:5,9:14:43.30:312,0,43	0/1:18,0:18:40.61:41,0,102	0/1:25,0:25:26.47:26,0,292	1/1:4,13:17:7.33:498,7,0	0/1:5,9:14:28.49:282,0,28	0/0:27,0:27:48.09:0,48,594	0/1:3,6:9:10.20:163,0,10	0/0:17,0:15:42.09:0,42,665	0/0:21,0:20:47.55:0,48,806	0/0:16,0:16:36.01:0,36,520	0/1:7,12:18:43.41:435,0,43	0/1:23,0:23:2.83:3,0,430	0/0:16,0:16:9.26:0,9,135	0/1:9,14:23:72.68:435,0,73	0/0:29,0:28:61.60:0,62,877	0/1:22,0:22:32.13:32,0,295	0/1:9,0:9:0.09:0,0,256
chr10	18822048	.	AT	A	6812.50	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-3.436;DP=740;FS=9.975;HRun=9;HaplotypeScore=215.5786;InbreedingCoeff=0.9914;MQ=67.16;MQ0=0;MQRankSum=-6.554;QD=21.70;ReadPosRankSum=2.423;VQSLOD=2.6228;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,120,1329	1/1:4,11:16:18.41:260,18,0	0/0:15,0:15:30.08:0,30,336	0/0:13,0:12:21.61:0,22,184	1/1:5,20:25:48.01:437,48,0	0/0:3,0:29:72.71:0,73,391	0/0:3,0:23:59.94:0,60,314	0/0:32,0:32:84.23:0,84,952	0/0:34,0:34:87.26:0,87,1004	1/1:4,26:30:81.02:738,81,0	1/1:5,17:22:38.99:357,39,0	0/0:11,0:32:70.28:0,70,405	1/1:4,32:36:96.02:869,96,0	1/1:1,28:29:78.03:714,78,0	0/0:8,0:33:77.53:0,78,440	0/0:8,0:23:51.65:0,52,303	1/1:3,22:25:69.02:627,69,0	0/0:4,0:8:14.51:0,15,92	0/0:24,0:25:66.01:0,66,732	0/0:38,0:39:99:0,114,1255	0/0:25,0:25:69.21:0,69,796	0/0:4,0:27:68.85:0,69,387	1/1:2,24:26:65.93:604,66,0	1/1:4,15:19:27.01:247,27,0	0/0:5,0:25:71.74:0,72,403	1/1:3,30:33:90.02:815,90,0	1/1:6,39:45:99:1036,114,0	1/1:4,4:8:11.99:110,12,0
chr10	18822637	.	C	CT	6225.47	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-14.489;DP=515;FS=0.729;HRun=8;HaplotypeScore=48.9144;InbreedingCoeff=0.9840;MQ=71.42;MQ0=2;MQRankSum=-2.077;QD=28.56;ReadPosRankSum=2.426;VQSLOD=5.0908;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:57.02:0,57,521	1/1:2,9:11:21.06:242,21,0	0/0:13,0:10:17.98:0,18,158	0/0:10,0:7:8.16:0,8,62	1/1:1,16:17:48.14:551,48,0	0/0:27,0:27:69.03:0,69,631	0/0:19,0:19:51.03:0,51,466	0/0:24,0:24:60.03:0,60,549	0/0:17,0:17:48.02:0,48,439	1/1:2,14:16:39.12:450,39,0	1/1:2,21:23:60.18:693,60,0	0/0:20,0:20:51.02:0,51,467	1/1:0,18:18:42.12:485,42,0	1/1:1,15:16:33.10:381,33,0	0/0:13,0:13:36.02:0,36,330	0/0:17,0:17:45.02:0,45,411	1/1:1,18:19:45.13:519,45,0	0/0:5,0:5:15.01:0,15,137	0/0:20,0:20:51.01:0,51,464	0/0:36,0:36:96.04:0,96,878	0/0:7,0:7:15.01:0,15,137	0/0:17,0:17:51.03:0,51,466	1/1:1,17:18:48.14:551,48,0	1/1:1,11:12:27.08:312,27,0	0/0:29,0:29:81.03:0,81,737	1/1:2,25:27:72.18:809,72,0	1/1:3,24:27:72.19:818,72,0	1/1:1,13:14:36.11:415,36,0
chr10	18823453	.	AAAG	A	4663.08	PASS	AB=1.000;AC=38;AF=0.679;AN=56;BaseQRankSum=-11.227;DP=494;FS=8.780;HRun=0;HaplotypeScore=97.7379;InbreedingCoeff=0.1585;MQ=67.25;MQ0=6;MQRankSum=4.670;QD=11.32;ReadPosRankSum=-7.332;VQSLOD=1.2558;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:18,0:18:21:21,0,62	1/1:4,4:8:24.04:269,24,0	0/0:33,0:16:13.48:0,13,150	0/1:25,0:12:0.48:0,0,118	1/1:23,1:24:37.46:379,37,0	0/0:21,0:21:28.60:0,29,150	0/1:7,0:6:18.81:43,0,19	0/1:39,0:39:85.62:327,0,86	0/1:14,0:14:52:72,0,52	1/1:16,4:20:27.55:318,28,0	1/1:5,12:17:22.42:265,22,0	0/0:12,0:12:9.06:0,9,56	1/1:16,0:16:45.64:371,46,0	1/1:1,2:3:5.98:56,6,0	0/0:16,0:16:30.61:0,31,156	0/1:20,0:19:10.31:10,0,106	1/1:15,3:18:48.83:477,49,0	0/1:14,0:12:11.03:11,0,70	0/1:27,0:26:76.67:96,0,77	0/1:24,0:23:48.93:112,0,49	1/1:5,0:5:1.72:20,2,0	1/1:6,0:3:2.92:17,3,0	1/1:3,10:13:17.58:162,18,0	1/1:0,5:5:3.01:40,3,0	0/1:20,0:20:16.15:16,0,154	1/1:4,24:28:78.03:770,78,0	1/1:29,0:28:66.48:478,66,0	1/1:8,4:12:30.04:332,30,0
chr10	18823454	.	AAG	A	4818.98	PASS	AB=1.000;AC=44;AF=0.786;AN=56;BaseQRankSum=-9.851;DP=494;FS=4.815;HRun=0;HaplotypeScore=89.2548;InbreedingCoeff=0.2286;MQ=66.56;MQ0=6;MQRankSum=4.816;QD=10.57;ReadPosRankSum=-6.592;VQSLOD=2.3212;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:18,0:18:18.21:36,0,18	1/1:8,0:8:23.97:202,24,0	0/1:31,0:15:0.74:1,0,136	0/1:24,0:12:0.48:0,0,94	1/1:25,0:25:40.47:474,40,0	0/0:20,0:20:21.06:0,21,74	1/1:8,0:7:5.57:84,6,0	1/1:40,0:40:16.26:438,16,0	0/1:14,0:14:4.78:95,0,5	1/1:20,0:20:27.86:269,28,0	1/1:15,2:17:18.39:262,18,0	0/1:13,0:13:14.14:14,0,16	1/1:16,0:16:34.80:321,35,0	1/1:3,0:3:5.95:42,6,0	0/0:18,0:18:16.61:0,17,66	0/1:21,0:20:23.52:24,0,40	1/1:18,0:18:50.84:413,51,0	0/1:14,0:12:15.98:16,0,29	1/1:26,0:25:20.36:227,20,0	1/1:24,0:23:18.90:203,19,0	1/1:5,0:5:5.27:28,5,0	1/1:7,0:4:2.92:17,3,0	1/1:12,1:13:17.81:148,18,0	1/1:5,0:5:3:25,3,0	0/1:19,0:19:34.09:34,0,45	1/1:26,0:27:77.90:651,78,0	1/1:24,4:27:70.91:552,71,0	1/1:10,1:11:29.94:244,30,0
chr10	18823455	.	AG	A	5809.65	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-3.082;DP=494;FS=0.000;HRun=1;HaplotypeScore=79.8212;InbreedingCoeff=0.6354;MQ=66.96;MQ0=5;MQRankSum=-4.265;QD=13.29;ReadPosRankSum=3.947;VQSLOD=3.8452;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:17,1:18:19.37:82,19,0	1/1:8,0:8:23.75:173,24,0	0/0:32,0:16:7.19:0,7,135	0/0:24,1:13:6:0,6,139	1/1:21,3:24:36.04:416,36,0	1/1:20,0:20:16.65:46,17,0	1/1:7,1:7:18.62:116,19,0	1/1:39,1:40:89.60:609,90,0	1/1:14,0:14:36.40:246,36,0	1/1:20,0:20:40.59:299,41,0	1/1:15,2:17:19.97:218,20,0	1/1:12,0:12:9.85:44,10,0	1/1:17,0:17:38:332,38,0	1/1:2,1:3:5.89:37,6,0	1/1:18,0:18:20.40:82,20,0	1/1:21,0:20:23.36:122,23,0	1/1:17,1:18:50.71:406,51,0	1/1:14,0:12:12.06:52,12,0	1/1:26,0:25:65.55:466,66,0	1/1:25,0:24:51.45:366,51,0	1/1:5,0:5:6.79:40,7,0	1/1:7,0:4:2.92:17,3,0	1/1:13,0:13:17.74:117,18,0	1/1:5,0:5:2.96:19,3,0	1/1:17,2:19:39.97:174,40,0	1/1:25,2:27:77.54:603,78,0	1/1:27,0:26:71.04:519,71,0	1/1:10,1:11:29.60:207,30,0
chr10	18823456	.	G	GA	2225.86	PASS	AB=1.000;AC=39;AF=0.696;AN=56;BaseQRankSum=-6.560;DP=493;FS=17.471;HRun=16;HaplotypeScore=92.4924;InbreedingCoeff=0.2029;MQ=67.04;MQ0=5;MQRankSum=-4.301;QD=5.25;ReadPosRankSum=-2.184;VQSLOD=0.3046;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:18,0:18:2.73:22,0,3	0/1:8,0:8:6.66:7,0,10	0/1:29,0:16:1.93:2,0,127	0/0:25,0:13:3.73:0,4,180	1/1:24,0:24:6.90:73,7,0	1/1:5,15:20:20.43:289,20,0	1/1:6,2:7:11.68:158,12,0	1/1:40,0:40:6.41:99,6,0	1/1:13,0:13:15.98:95,16,0	0/1:17,0:17:6.33:12,0,6	0/1:16,0:16:7.24:7,0,8	1/1:3,10:13:7.74:120,8,0	1/1:18,0:18:8.60:52,9,0	1/1:3,0:3:2.80:13,3,0	1/1:6,12:18:7.93:196,8,0	1/1:8,14:21:16.72:205,17,0	0/1:18,0:18:1.09:67,0,1	1/1:6,8:12:0.84:72,1,0	1/1:25,0:24:22.06:109,22,0	0/1:24,0:23:0.45:124,0,0	1/1:4,0:4:3.45:23,3,0	1/1:2,6:5:3.01:34,3,0	0/1:14,0:14:8.78:9,0,10	0/0:5,0:5:1.55:0,2,4	1/1:9,11:20:42.41:544,42,0	0/0:28,0:28:11.36:0,11,36	0/1:28,0:27:10.93:43,0,11	0/0:11,0:11:8.02:0,8,25
chr10	18824741	.	C	CAAAA	8762.20	PASS	AB=0.824;AC=43;AF=0.768;AN=56;BaseQRankSum=0.789;DP=625;FS=4.560;HRun=16;HaplotypeScore=172.0373;InbreedingCoeff=0.7084;MQ=69.01;MQ0=0;MQRankSum=-3.476;QD=16.38;ReadPosRankSum=-6.069;VQSLOD=-0.2302;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:21:25.70:0,26,285	1/1:4,0:10:12.51:185,13,0	0/0:22,0:14:7.91:0,8,74	0/0:12,0:12:5.47:0,5,79	1/1:7,0:17:25.52:219,26,0	0/1:18,8:32:1.72:402,0,2	0/1:15,1:21:3.90:357,0,4	1/1:33,0:39:48.27:707,48,0	0/1:23,0:23:6.26:6,0,48	1/1:10,0:24:45.36:464,45,0	1/1:19,0:23:48.05:613,48,0	1/1:18,0:23:27.43:461,27,0	1/1:13,0:24:20.99:310,21,0	1/1:15,0:15:27.06:378,27,0	1/1:11,0:21:15.05:259,15,0	0/0:16,0:20:18.24:0,18,174	1/1:10,0:10:15.57:182,16,0	0/0:12,0:12:13.93:0,14,158	1/1:32,0:30:54.08:822,54,0	1/1:18,1:25:28.85:415,29,0	1/1:12,0:12:17.33:220,17,0	1/1:34,0:34:54.27:663,54,0	1/1:26,0:27:50.26:742,50,0	1/1:9,11:22:14.26:182,14,0	1/1:17,9:27:19.88:339,20,0	1/1:10,0:20:33.07:417,33,0	1/1:15,1:30:21.43:286,21,0	1/1:14,0:17:10.85:135,11,0
chr10	18825908	.	T	TCTTAG	36888.61	PASS	AC=42;AF=0.778;AN=54;BaseQRankSum=6.225;DP=691;FS=1.066;HRun=0;HaplotypeScore=155.7414;InbreedingCoeff=0.9989;MQ=84.71;MQ0=0;MQRankSum=-17.666;QD=71.63;ReadPosRankSum=0.071;VQSLOD=6.1008;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,111,2367	1/1:1,10:11:33.11:1042,33,0	0/0:34,0:34:90.21:0,90,1763	0/0:28,0:28:78.22:0,78,1539	1/1:4,13:17:30.10:828,30,0	1/1:4,16:20:51.17:1441,51,0	1/1:7,31:42:99:3240,108,0	1/1:8,20:30:78.24:2204,78,0	0/0:30,0:30:90.29:0,90,1909	1/1:7,18:27:75.18:2046,75,0	1/1:6,12:19:45.07:1140,45,0	1/1:6,28:38:87.25:2558,87,0	1/1:6,26:33:84.24:2480,84,0	1/1:3,33:37:96.33:3010,96,0	1/1:4,23:29:72.20:2143,72,0	0/0:22,0:22:63.20:0,63,1328	1/1:2,19:25:54.19:1706,54,0	0/0:24,0:24:66.17:0,66,1346	1/1:5,6:12:36.11:994,36,0	1/1:3,17:21:57.15:1709,57,0	1/1:4,12:18:21.07:663,21,0	1/1:6,14:20:42.14:1320,42,0	1/1:2,11:14:36.12:1011,36,0	1/1:3,29:33:63.13:1839,63,0	1/1:2,17:19:57.19:1687,57,0	1/1:7,15:26:78.18:2030,78,0	1/1:1,19:23:56.92:1798,57,0	./.
chr10	18826673	.	CA	C	13534.10	PASS	AB=0.563;AC=47;AF=0.839;AN=56;BaseQRankSum=10.801;DP=655;FS=5.204;HRun=9;HaplotypeScore=165.9013;InbreedingCoeff=0.8754;MQ=78.58;MQ0=0;MQRankSum=-4.320;QD=23.70;ReadPosRankSum=2.294;VQSLOD=3.2554;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:90.27:0,90,1039	0/1:2,7:9:10.60:168,0,11	0/0:20,0:20:35.70:0,36,424	0/0:11,0:11:27.07:0,27,304	1/1:3,21:24:57.02:522,57,0	1/1:2,21:23:63.03:577,63,0	1/1:2,27:29:78.04:714,78,0	1/1:2,24:26:71.98:641,72,0	0/0:19,1:20:23.68:0,24,525	1/1:6,28:34:81.04:741,81,0	1/1:2,19:21:54.03:494,54,0	1/1:2,21:23:60.03:549,60,0	1/1:4,17:21:51.01:466,51,0	1/1:2,17:19:51.03:467,51,0	1/1:2,28:30:75.03:686,75,0	1/1:2,15:17:42.02:384,42,0	1/1:2,30:32:84.04:768,84,0	1/1:2,29:31:84.04:769,84,0	1/1:2,18:20:50.99:460,51,0	1/1:2,30:32:90.05:824,90,0	1/1:2,18:20:48.03:438,48,0	1/1:5,22:27:56.89:522,57,0	1/1:0,19:19:57.03:522,57,0	1/1:2,27:29:78.04:714,78,0	1/1:0,26:26:78.04:714,78,0	1/1:2,24:26:72.02:653,72,0	1/1:3,23:26:59.99:549,60,0	1/1:0,7:7:21.01:192,21,0
chr10	18827665	.	TTGTGTG	T	174.71	PASS	AB=0.674;AC=4;AF=0.071;AN=56;BaseQRankSum=2.285;DP=660;FS=6.190;HRun=0;HaplotypeScore=179.8151;InbreedingCoeff=0.3110;MQ=56.76;MQ0=19;MQRankSum=-3.158;QD=3.12;ReadPosRankSum=1.147;VQSLOD=2.3986;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:10,12:21:0.02:0,0,0	0/0:6,0:6:5.66:0,6,167	0/0:28,0:18:3.01:0,3,62	0/0:30,0:15:5.99:0,6,63	0/0:21,0:21:38.99:0,39,825	0/0:22,0:22:24.03:0,24,319	0/0:22,0:21:10.59:0,11,187	0/0:27,0:24:32.95:0,33,353	1/1:7,12:19:12.04:249,12,0	0/0:33,0:34:41.85:0,42,895	0/0:15,0:16:30:0,30,645	0/0:40,0:36:26.85:0,27,687	0/0:20,0:20:30.48:0,30,477	0/0:28,0:28:54.09:0,54,1136	0/0:16,0:17:3.01:0,3,85	0/0:13,1:19:3.16:0,3,67	0/0:25,0:28:24:0,24,1245	0/1:8,0:13:23.54:24,0,36	0/0:21,0:20:21.79:0,22,297	0/0:18,0:19:14.49:0,14,130	0/0:43,0:43:32.65:0,33,527	0/0:23,0:21:3.01:0,3,91	0/0:18,0:19:5.35:0,5,36	0/0:24,0:23:2.91:0,3,50	0/0:19,0:18:8.94:0,9,174	0/0:29,0:29:40.65:0,41,847	0/0:25,0:25:15.91:0,16,686	0/0:14,0:16:18.69:0,19,694
chr10	18827696	.	T	TGTGTGC	1862.04	PASS	AB=0.812;AC=24;AF=0.429;AN=56;BaseQRankSum=0.452;DP=622;FS=0.000;HRun=0;HaplotypeScore=172.2976;InbreedingCoeff=0.0481;MQ=47.18;MQ0=20;MQRankSum=-2.806;QD=4.36;ReadPosRankSum=-2.310;VQSLOD=2.1938;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:11.66:0,12,83	0/0:6,0:6:5.31:0,5,78	0/0:16,0:9:23.91:0,24,201	0/0:25,0:11:20.75:0,21,176	0/0:14,0:15:2.96:0,3,254	1/1:15,0:25:11.83:195,12,0	0/1:5,27:33:3.28:100,0,3	1/1:24,0:22:30.11:248,30,0	0/0:24,0:23:0.01:0,0,212	0/1:32,0:30:99:106,0,319	0/1:16,0:16:17.08:17,0,304	0/1:20,24:44:40.33:507,0,40	0/0:14,0:14:7.80:0,8,232	0/0:25,0:25:29.99:0,30,501	1/1:4,7:15:2.95:32,3,0	0/0:21,0:21:5.78:0,6,59	0/0:25,0:25:32.81:0,33,644	0/1:17,0:16:33.03:33,0,214	1/1:20,0:20:21.17:176,21,0	0/1:7,7:16:10.66:40,0,11	0/1:24,1:37:18.77:382,0,19	1/1:9,14:23:2.64:12,3,0	1/1:3,9:14:2.87:36,3,0	0/1:7,12:18:0:0,0,0	0/1:10,14:24:4.13:41,0,4	0/1:19,0:18:42.35:42,0,275	0/1:17,0:17:14.42:14,0,304	0/1:18,0:18:46.55:47,0,259
chr10	18827698	.	TGC	T	199.44	PASS	AB=0.983;AC=14;AF=0.250;AN=56;BaseQRankSum=-0.928;DP=600;FS=1.422;HRun=0;HaplotypeScore=149.3468;InbreedingCoeff=0.0014;MQ=48.07;MQ0=20;MQRankSum=-0.548;QD=0.67;ReadPosRankSum=-2.078;VQSLOD=2.0823;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:14.48:0,14,98	0/0:6,0:6:6.08:0,6,110	0/1:17,0:10:1.37:1,0,57	0/0:26,0:14:8.77:0,9,104	0/0:15,0:15:33.03:0,33,516	0/1:23,1:24:39.39:50,0,39	0/0:32,1:32:6.85:0,7,54	0/1:24,2:24:70.88:71,0,167	0/0:24,0:23:14.52:0,15,119	0/0:32,0:30:32.51:0,33,616	0/0:16,0:16:20.04:0,20,466	0/1:43,0:40:9.86:10,0,243	0/0:14,0:14:23.75:0,24,359	0/0:25,0:25:45.14:0,45,762	0/0:14,0:14:2.95:0,3,43	0/1:19,0:19:1.13:11,0,1	0/1:24,0:24:0.89:1,0,738	1/1:17,0:16:3.01:66,3,0	0/1:17,0:17:38.44:38,0,105	0/1:13,0:13:10.64:20,0,11	0/1:35,4:35:54.95:55,0,136	0/0:23,0:22:2.89:0,3,55	0/1:13,0:13:0:0,0,0	0/1:17,0:15:0:0,0,0	0/1:25,0:24:8.07:8,0,81	0/0:18,0:17:27.74:0,28,553	0/0:16,0:16:44.50:0,45,599	0/0:17,0:17:14.77:0,15,467
chr10	18827704	.	CGT	C	381.47	PASS	AB=1.000;AC=6;AF=0.111;AN=54;BaseQRankSum=-1.195;DP=605;FS=0.000;HRun=0;HaplotypeScore=165.5781;InbreedingCoeff=0.6428;MQ=50.00;MQ0=16;MQRankSum=-0.023;QD=5.61;ReadPosRankSum=1.080;VQSLOD=2.7912;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:21.04:0,21,327	0/0:10,0:10:5.94:0,6,116	0/0:23,0:17:26.30:0,26,480	0/0:34,0:23:49.49:0,49,761	0/0:15,0:15:30.09:0,30,539	0/0:21,0:20:10.28:0,10,137	0/0:33,0:32:6.72:0,7,89	0/0:28,0:27:56.17:0,56,786	0/0:26,0:25:41.38:0,41,555	0/0:26,0:24:47.23:0,47,1156	0/0:15,0:15:33.09:0,33,548	0/0:43,0:40:38.12:0,38,479	0/0:11,0:11:21.01:0,21,283	0/0:28,0:28:45.01:0,45,692	0/1:13,0:13:0.11:0,0,0	1/1:4,15:19:4.97:90,5,0	0/0:23,0:23:51.74:0,52,836	1/1:3,13:15:27.08:399,27,0	0/0:15,0:15:29.25:0,29,362	0/0:11,0:11:2.96:0,3,19	0/0:38,0:34:24:0,24,291	0/0:23,0:22:3.01:0,3,49	./.	0/1:20,0:18:0:0,0,0	0/0:24,0:23:8.95:0,9,86	0/0:21,0:20:50.96:0,51,839	0/0:16,0:16:45.05:0,45,686	0/0:18,0:18:36.43:0,36,689
chr10	18827748	.	GTC	G	38.86	PASS	AB=0.947;AC=8;AF=0.182;AN=44;BaseQRankSum=2.706;DP=622;FS=2.043;HRun=0;HaplotypeScore=171.3015;InbreedingCoeff=-0.0894;MQ=47.20;MQ0=11;MQRankSum=-4.677;QD=0.24;ReadPosRankSum=-0.766;VQSLOD=2.4514;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:43.03:0,43,715	0/0:11,1:12:7.57:0,8,90	0/0:32,0:20:33.19:0,33,434	0/0:47,0:34:51.63:0,52,754	0/0:25,0:24:9:0,9,115	0/0:20,2:22:0.47:0,0,1	0/0:25,4:26:1.82:0,2,5	0/1:39,1:36:16.71:17,0,503	0/0:29,0:28:78.27:0,78,1308	0/1:36,1:31:10.57:11,0,318	0/0:12,0:11:5.59:0,6,34	0/0:28,4:31:1.33:0,1,45	0/1:16,2:16:8.85:9,0,38	0/0:39,0:37:2.94:0,3,21	./.	0/0:23,0:23:0.96:0,1,45	0/1:16,2:16:31.36:86,0,31	0/0:13,0:13:13.88:0,14,141	0/1:13,1:13:4.14:4,0,128	./.	0/0:17,1:18:2.99:0,3,25	./.	./.	./.	./.	0/0:32,2:33:1.95:0,2,255	0/1:25,0:25:4.29:4,0,229	1/1:8,0:8:0.10:13,0,0
chr10	18827758	.	GTC	G	2667.56	PASS	AB=0.685;AC=17;AF=0.425;AN=40;BaseQRankSum=4.763;DP=627;FS=13.157;HRun=0;HaplotypeScore=148.1684;InbreedingCoeff=-0.2303;MQ=40.01;MQ0=16;MQRankSum=-5.277;QD=7.73;ReadPosRankSum=4.093;VQSLOD=2.3306;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:43.03:0,43,729	0/0:6,7:12:8.54:0,9,69	0/0:22,0:10:8.11:0,8,124	0/0:36,0:20:27.07:0,27,369	./.	1/1:10,15:23:2.29:32,2,0	0/0:14,13:23:5.75:0,6,43	0/1:19,16:31:99:521,0,105	0/0:32,0:30:72.25:0,72,1247	0/1:13,22:28:99:506,0,239	1/1:9,3:11:3.01:40,3,0	0/1:15,19:32:21.56:160,0,22	0/1:13,7:17:48.04:48,0,98	0/1:17,24:39:0.12:0,0,0	./.	1/1:2,21:23:2.03:38,2,0	0/1:15,3:17:53.78:64,0,54	0/1:7,5:12:46.72:156,0,47	0/1:10,5:13:23.26:190,0,23	./.	./.	./.	./.	./.	./.	0/1:19,20:36:99:683,0,199	0/1:12,12:23:99:163,0,100	0/1:3,7:10:45.20:196,0,45
chr10	18827762	.	C	CTCTG	3655.81	PASS	AB=0.977;AC=19;AF=0.432;AN=44;BaseQRankSum=4.400;DP=645;FS=7.205;HRun=0;HaplotypeScore=157.9447;InbreedingCoeff=-0.1277;MQ=36.26;MQ0=17;MQRankSum=-2.959;QD=10.02;ReadPosRankSum=2.695;VQSLOD=2.6789;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:43.37:0,43,800	0/0:13,0:12:7.61:0,8,70	0/0:20,0:8:7.98:0,8,124	0/0:35,0:16:27.07:0,27,377	./.	1/1:22,0:23:5.30:75,5,0	0/0:28,1:25:2.56:0,3,32	0/1:35,0:28:99:471,0,149	0/0:31,0:29:72.25:0,72,1366	0/1:36,0:29:99:687,0,185	1/1:15,0:14:3.01:40,3,0	0/1:34,0:33:1.50:277,0,2	0/1:20,0:17:76.57:90,0,77	1/1:36,5:39:2.34:9,2,0	./.	1/1:24,0:24:2.04:7,2,0	0/1:16,2:16:32.35:117,0,32	0/1:13,0:12:77.61:78,0,85	0/1:19,0:17:63.18:284,0,63	0/1:6,0:6:0:0,0,0	0/0:14,3:15:2.97:0,3,20	./.	./.	./.	./.	0/1:36,3:37:99:1040,0,370	0/1:25,1:24:99:235,0,122	0/1:12,0:12:40.95:245,0,41
chr10	18827768	.	GTC	G	1635.81	PASS	AB=0.759;AC=17;AF=0.405;AN=42;BaseQRankSum=5.446;DP=631;FS=15.858;HRun=0;HaplotypeScore=153.7959;InbreedingCoeff=-0.2922;MQ=33.21;MQ0=20;MQRankSum=-3.633;QD=4.33;ReadPosRankSum=3.344;VQSLOD=1.8205;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:43.03:0,43,733	0/0:7,6:12:7.63:0,8,52	0/1:11,0:5:0.88:1,0,17	0/0:29,0:10:8.04:0,8,63	./.	1/1:13,14:25:1.97:27,2,0	0/0:19,10:25:3.23:0,3,27	0/1:26,5:23:99:112,0,209	0/0:30,0:28:72.22:0,72,1212	0/1:20,17:30:99:399,0,203	./.	0/1:17,19:34:39.85:137,0,40	0/1:14,6:16:38.60:39,0,143	0/1:24,20:42:0.12:0,0,1	0/1:9,10:18:0:0,0,0	1/1:23,1:24:0.57:3,1,0	0/1:14,3:16:47.74:48,0,99	0/1:8,2:9:12.87:13,0,27	0/1:13,5:15:99:162,0,194	./.	0/0:10,6:14:3.01:0,3,35	./.	./.	./.	./.	0/1:24,19:40:99:580,0,267	0/1:17,9:24:71.34:71,0,145	0/1:6,7:12:44.11:164,0,44
chr10	18827778	.	CTCTG	C	1941.71	PASS	AB=0.888;AC=16;AF=0.400;AN=40;BaseQRankSum=2.253;DP=638;FS=0.000;HRun=0;HaplotypeScore=170.1214;InbreedingCoeff=-0.5044;MQ=29.13;MQ0=20;MQRankSum=-4.498;QD=4.68;ReadPosRankSum=-1.599;VQSLOD=1.7158;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:38.27:0,38,1010	0/1:9,4:12:26.95:74,0,27	./.	./.	./.	0/0:31,1:29:2.90:0,3,9	0/1:26,3:25:45.73:46,0,61	0/1:29,0:20:99:103,0,329	0/0:29,0:27:63.10:0,63,1644	0/1:34,4:31:99:251,0,272	./.	0/1:36,1:35:25.50:90,0,25	0/1:14,7:17:54.83:146,0,55	0/1:35,12:45:0.03:0,0,1	0/1:19,0:17:0:0,0,0	0/1:28,0:28:23.66:25,0,24	0/1:13,2:13:26.56:27,0,40	0/1:10,2:11:99:123,0,127	0/1:17,2:16:99:160,0,115	./.	0/0:18,2:18:4.46:0,4,110	./.	./.	0/1:27,0:25:0.39:0,0,0	./.	0/1:36,7:40:99:655,0,100	0/1:16,9:23:42.51:302,0,43	0/1:11,2:12:58.70:59,0,92
chr10	18827780	.	CTG	C	774.66	PASS	AB=0.924;AC=16;AF=0.400;AN=40;BaseQRankSum=2.914;DP=629;FS=0.597;HRun=0;HaplotypeScore=170.2928;InbreedingCoeff=-0.3700;MQ=29.07;MQ0=20;MQRankSum=-2.775;QD=2.00;ReadPosRankSum=-1.328;VQSLOD=2.5127;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:30.26:0,30,728	0/1:12,1:12:8.74:21,0,9	./.	./.	./.	1/1:28,4:29:0.39:19,0,0	0/1:28,2:26:5.95:6,0,46	0/1:26,3:20:99:106,0,353	0/0:28,0:26:63.20:0,63,1181	0/1:29,8:30:99:111,0,177	./.	0/1:30,7:35:6.47:66,0,6	0/1:20,2:18:19.48:55,0,19	0/1:40,4:42:0.12:0,0,1	0/1:17,2:17:0:0,0,0	0/0:25,1:26:4.70:0,5,23	0/1:15,0:13:43.34:43,0,50	0/1:12,0:11:12.93:13,0,130	0/1:17,0:15:36.65:37,0,160	./.	0/0:19,1:18:5.84:0,6,109	./.	./.	0/0:28,0:26:0.47:0,0,1	./.	0/1:40,3:40:85.97:278,0,86	0/1:22,3:23:64.10:92,0,64	0/1:12,1:12:39.18:45,0,39
chr10	18827782	.	G	GTC	1484.18	PASS	AB=0.899;AC=13;AF=0.325;AN=40;BaseQRankSum=6.863;DP=626;FS=13.766;HRun=0;HaplotypeScore=170.3423;InbreedingCoeff=-0.2516;MQ=29.11;MQ0=21;MQRankSum=-4.517;QD=4.59;ReadPosRankSum=-1.503;VQSLOD=1.4495;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:35.40:0,35,488	0/0:13,0:12:5.64:0,6,42	./.	./.	./.	1/1:32,0:29:3.30:32,3,0	0/0:29,1:26:9.37:0,9,61	0/0:26,0:18:8.41:0,8,208	0/0:29,0:27:60.20:0,60,824	0/1:35,2:30:99:185,0,157	./.	0/1:31,4:34:30.16:127,0,30	0/1:21,0:17:78.43:78,0,99	0/1:39,5:42:0.23:1,0,0	0/0:18,0:16:0:0,0,0	0/1:22,5:27:8.32:110,0,8	0/1:14,1:13:39.75:40,0,52	0/1:9,5:13:45.20:165,0,45	0/1:13,2:14:70.24:142,0,70	./.	0/0:18,2:18:6.74:0,7,76	./.	./.	0/0:28,0:26:0:0,0,1	./.	0/1:40,3:40:81.56:465,0,82	0/1:23,3:24:33.65:122,0,34	0/1:12,1:12:49.01:138,0,49
chr10	18827788	.	GTC	G	1231.96	PASS	AB=0.832;AC=18;AF=0.429;AN=42;BaseQRankSum=0.734;DP=611;FS=6.571;HRun=0;HaplotypeScore=166.5494;InbreedingCoeff=-0.1941;MQ=29.25;MQ0=30;MQRankSum=-6.051;QD=3.64;ReadPosRankSum=1.204;VQSLOD=2.4141;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,1:37:39.02:0,39,572	0/1:12,2:13:28.42:28,0,58	./.	./.	0/0:23,2:23:3.01:0,3,46	0/1:24,6:27:10.74:23,0,11	1/1:19,7:22:2.93:35,3,0	1/1:14,9:16:9.79:227,10,0	0/0:28,0:26:57.17:0,57,943	0/1:30,6:29:99:198,0,256	./.	0/1:26,9:33:29.14:41,0,29	0/1:17,4:17:77.90:138,0,78	0/0:37,4:39:2.89:0,3,46	0/0:16,4:17:0.21:0,0,1	0/1:13,14:27:26.79:27,0,67	1/1:11,3:12:7.16:77,7,0	0/1:11,3:13:41.53:128,0,42	0/1:13,3:14:21.59:120,0,22	./.	0/0:18,1:16:2.99:0,3,52	./.	./.	0/0:22,4:24:0.47:0,0,1	./.	0/1:37,7:41:99:139,0,265	0/1:24,2:24:77.65:78,0,153	1/1:10,2:11:2.89:104,3,0
chr10	18827794	.	CTCTG	C	1040.45	PASS	AB=0.974;AC=23;AF=0.479;AN=48;BaseQRankSum=1.361;DP=638;FS=0.000;HRun=0;HaplotypeScore=185.9484;InbreedingCoeff=-0.1539;MQ=29.70;MQ0=34;MQRankSum=-3.179;QD=2.46;ReadPosRankSum=-2.048;VQSLOD=2.3746;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:13.35:0,13,834	0/1:14,0:13:15.32:15,0,86	./.	./.	0/0:24,1:22:3.01:0,3,65	1/1:27,3:27:0.20:32,0,0	1/1:24,3:23:0.89:32,1,0	1/1:22,1:18:19.95:179,20,0	0/0:27,0:25:57.08:0,57,1515	0/1:40,0:33:48.20:48,0,419	0/0:13,0:11:5.93:0,6,41	1/1:32,6:35:13.86:75,14,0	0/1:21,1:18:79.19:79,0,116	0/0:43,0:41:3:0,3,67	1/1:21,4:22:5.21:44,5,0	0/1:24,3:27:35.59:36,0,54	0/1:15,0:12:27.18:47,0,27	0/1:13,1:13:71.74:190,0,72	0/1:15,1:14:19.90:143,0,20	0/1:5,0:5:0:0,0,0	0/1:17,1:15:18.38:18,0,76	./.	0/0:10,0:8:0:0,0,0	0/1:27,0:25:0.16:0,0,1	./.	0/1:42,1:39:99:147,0,318	0/1:26,0:24:67.51:68,0,130	0/1:13,0:11:4.54:25,0,5
chr10	18827796	.	CTG	C	1104.51	PASS	AB=0.970;AC=24;AF=0.480;AN=50;BaseQRankSum=5.849;DP=632;FS=1.893;HRun=0;HaplotypeScore=172.8614;InbreedingCoeff=-0.1066;MQ=30.23;MQ0=34;MQRankSum=-5.019;QD=2.78;ReadPosRankSum=-0.367;VQSLOD=2.7386;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:37:6.95:0,7,458	0/1:15,0:14:27.88:28,0,38	./.	./.	0/0:23,2:22:3:0,3,27	1/1:28,0:26:0.29:15,0,0	1/1:25,0:21:5.88:36,6,0	0/1:22,1:18:6.18:162,0,6	0/0:28,0:26:33.36:0,33,858	0/1:35,4:33:99:118,0,223	0/0:15,0:13:8.92:0,9,64	0/1:36,2:35:4.40:56,0,4	0/1:21,1:18:26.76:110,0,27	0/0:40,3:41:2.92:0,3,30	1/1:24,1:22:5.48:43,5,0	0/1:24,1:25:18:18,0,74	0/1:16,0:13:2.09:45,0,2	0/1:13,0:12:43.89:90,0,44	1/1:13,0:11:0.86:97,1,0	0/1:5,0:5:0:0,0,0	0/1:17,0:14:16.83:17,0,39	1/1:12,0:12:2.99:24,3,0	0/0:10,0:8:0.47:0,0,1	0/0:27,0:25:0.32:0,0,1	./.	0/1:42,1:39:99:256,0,123	0/1:24,2:24:55.21:55,0,94	1/1:11,1:10:11.64:73,12,0
chr10	18827808	.	GTC	G	146.87	PASS	AB=0.962;AC=13;AF=0.250;AN=52;BaseQRankSum=1.292;DP=627;FS=13.021;HRun=0;HaplotypeScore=169.0477;InbreedingCoeff=0.0316;MQ=31.86;MQ0=32;MQRankSum=-0.352;QD=0.58;ReadPosRankSum=-0.597;VQSLOD=2.1724;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:32:2.05:0,2,21	0/0:13,0:12:13.52:0,14,119	./.	./.	0/0:28,0:25:12.03:0,12,128	0/0:34,0:32:10.74:0,11,49	0/0:28,0:25:5.97:0,6,66	0/0:34,0:28:7.12:0,7,39	0/0:27,0:24:8.86:0,9,51	0/1:36,1:31:5.96:6,0,190	0/0:14,0:13:9.02:0,9,93	0/1:34,0:30:2.36:2,0,39	0/1:19,2:17:20.76:53,0,21	0/0:38,2:38:3:0,3,33	0/0:26,0:23:5.53:0,6,42	1/1:26,0:26:14.69:124,15,0	0/1:15,1:13:22.32:22,0,34	1/1:13,0:12:1.12:29,1,0	0/0:9,0:8:3:0,3,26	0/0:6,0:6:1.95:0,2,24	0/0:19,0:16:5.96:0,6,48	0/0:11,0:11:3:0,3,27	0/0:10,0:9:0.47:0,0,1	1/1:25,0:23:0.57:1,1,0	0/1:17,0:16:1.17:1,0,47	0/1:36,1:33:6.18:6,0,207	0/1:26,1:25:25.28:25,0,146	0/0:9,0:7:2.97:0,3,20
chr10	18827814	.	C	CTCTG	785.63	PASS	AB=0.980;AC=21;AF=0.404;AN=52;BaseQRankSum=-1.036;DP=630;FS=2.742;HRun=0;HaplotypeScore=180.2394;InbreedingCoeff=-0.1081;MQ=33.28;MQ0=34;MQRankSum=0.318;QD=2.08;ReadPosRankSum=-0.568;VQSLOD=2.1351;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:36:20.10:0,20,160	0/1:14,0:13:14.96:15,0,123	./.	./.	0/0:26,0:23:14.95:0,15,122	0/1:29,2:29:21.24:60,0,21	0/1:29,0:27:33.78:34,0,72	0/0:31,0:28:4.77:0,5,131	0/0:26,0:23:38.35:0,38,204	0/1:39,0:33:99:121,0,228	0/0:14,0:13:8.68:0,9,76	0/1:30,3:30:1.51:144,0,2	0/1:21,0:17:16.56:17,0,70	0/0:40,0:38:5.56:0,6,74	1/1:19,3:19:8.68:151,9,0	0/0:27,0:27:20.07:0,20,99	0/1:16,0:13:12.95:13,0,45	0/0:14,0:13:7.41:0,7,111	0/1:10,0:8:8.11:8,0,55	0/1:7,0:7:1.06:8,0,1	1/1:20,0:17:3.74:27,4,0	0/1:12,0:12:37.06:37,0,39	1/1:13,2:14:3.49:67,3,0	1/1:25,1:24:0.27:88,0,0	0/1:16,2:17:9.07:87,0,9	0/1:36,0:32:26.48:26,0,225	0/1:28,0:25:34.69:35,0,141	0/0:10,0:7:5.86:0,6,39
chr10	18827816	.	C	CTG	548.15	PASS	AB=0.976;AC=19;AF=0.365;AN=52;BaseQRankSum=0.316;DP=625;FS=1.946;HRun=0;HaplotypeScore=170.2537;InbreedingCoeff=-0.0615;MQ=33.49;MQ0=35;MQRankSum=-0.094;QD=1.58;ReadPosRankSum=1.936;VQSLOD=2.7183;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:34:20.22:0,20,156	0/1:14,0:13:15.85:16,0,84	./.	./.	0/0:26,0:23:12.93:0,13,60	0/1:28,2:28:12.93:45,0,13	0/1:27,1:27:59.37:59,0,67	0/0:31,0:28:27.35:0,27,223	0/0:26,0:23:23.04:0,23,205	0/1:38,1:34:99:151,0,161	0/0:13,0:12:7.56:0,8,34	0/1:34,2:32:15.32:15,0,33	0/1:22,0:18:22.82:23,0,46	0/0:40,0:38:5.77:0,6,48	1/1:18,2:17:7.41:95,7,0	0/0:26,0:26:26.42:0,26,135	0/1:16,0:13:18.40:18,0,20	0/0:14,0:13:10.05:0,10,117	0/1:9,1:8:34.52:35,0,74	1/1:7,0:7:8.76:99,9,0	1/1:18,2:17:3.83:65,4,0	0/0:11,0:11:2.60:0,3,43	0/1:15,0:14:7.13:7,0,87	1/1:26,0:24:5.55:33,6,0	0/0:17,1:17:2.07:0,2,37	0/1:36,0:32:20.30:20,0,222	0/1:28,0:25:23.40:23,0,74	0/0:10,0:7:5.82:0,6,33
chr10	18828101	.	T	TAACTG	34306.58	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=16.154;DP=608;FS=17.053;HRun=0;HaplotypeScore=176.0438;InbreedingCoeff=0.9949;MQ=82.02;MQ0=0;MQRankSum=-17.926;QD=80.34;ReadPosRankSum=0.914;VQSLOD=5.3792;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,114,2586	1/1:0,6:6:18.06:596,18,0	0/0:23,0:23:69.10:0,69,1377	0/0:26,0:26:57.07:0,57,1345	1/1:3,10:16:36.04:1019,36,0	1/1:2,23:26:75.26:2421,75,0	1/1:4,15:20:57.20:1818,57,0	1/1:9,13:23:60.20:1779,60,0	0/0:26,0:26:78.27:0,78,1798	1/1:1,9:11:33.10:1018,33,0	1/1:4,11:15:42.14:1257,42,0	1/1:4,22:26:78.27:2518,78,0	1/1:2,22:24:72.25:2353,72,0	1/1:7,17:26:60.21:1900,60,0	1/1:6,24:32:84.25:2659,84,0	0/0:36,0:36:99:0,108,2403	1/1:3,15:19:48.16:1590,48,0	0/0:26,0:26:78.24:0,78,1737	1/1:9,12:20:51.17:1535,51,0	1/1:1,13:14:39.13:1293,39,0	1/1:9,12:23:32.81:969,33,0	1/1:1,11:15:36.04:1110,36,0	1/1:5,8:14:33.11:1004,33,0	1/1:7,12:21:39.13:1200,39,0	1/1:0,19:23:54.19:1790,54,0	1/1:3,14:19:57.15:1731,57,0	1/1:4,21:26:69.24:2291,69,0	1/1:1,5:7:15.05:456,15,0
chr10	18828240	.	TG	T	1847.11	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.904;DP=688;FS=0.534;HRun=2;HaplotypeScore=92.2230;InbreedingCoeff=0.9996;MQ=82.59;MQ0=0;MQRankSum=0.812;QD=36.22;ReadPosRankSum=2.130;VQSLOD=4.0610;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,117,1691	0/0:17,0:17:51.17:0,51,764	0/0:21,0:21:60.18:0,60,851	0/0:22,0:22:66.22:0,66,971	0/0:23,0:23:63.17:0,63,932	0/0:25,0:25:69.22:0,69,1012	0/0:21,0:21:60.20:0,60,898	0/0:24,0:24:72.24:0,72,1069	0/0:24,0:24:72.24:0,72,1077	0/0:14,0:14:39.13:0,39,561	0/0:13,0:13:36.11:0,36,510	0/0:27,0:27:81.27:0,81,1212	0/0:26,0:26:75.22:0,75,1099	0/0:28,0:28:84.28:0,84,1256	0/0:28,0:28:75.25:0,75,1122	1/1:0,23:23:69.22:895,69,0	0/0:28,0:28:78.26:0,78,1166	1/1:0,28:28:84.26:1073,84,0	0/0:18,0:18:42.14:0,42,619	0/0:29,0:29:78.23:0,78,1107	0/0:46,0:46:99:0,123,1778	0/0:20,0:20:57.18:0,57,823	0/0:30,0:30:81.24:0,81,1148	0/0:42,0:42:99:0,114,1708	0/0:16,0:16:45.15:0,45,671	0/0:19,0:19:57.19:0,57,852	0/0:25,0:25:75.25:0,75,1117	0/0:11,0:11:30.10:0,30,450
chr10	18828805	.	C	CAG	31075.25	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-3.127;DP=802;FS=2.145;HRun=0;HaplotypeScore=99.3996;InbreedingCoeff=0.9999;MQ=86.17;MQ0=0;MQRankSum=-5.073;QD=51.03;ReadPosRankSum=4.241;VQSLOD=5.8726;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,147,2197	1/1:1,11:12:33.11:636,33,0	0/0:33,0:33:90.19:0,90,1324	0/0:19,0:19:51.14:0,51,730	1/1:3,26:31:78.26:1437,78,0	1/1:0,30:30:84.29:1621,84,0	1/1:0,23:23:54.19:1042,54,0	1/1:4,31:36:96.30:1770,96,0	0/0:27,0:27:81.22:0,81,1173	1/1:1,33:34:99:1886,102,0	1/1:1,17:18:54.18:1021,54,0	1/1:0,31:31:84.29:1621,84,0	1/1:3,35:38:99:1908,99,0	1/1:0,27:27:66.23:1264,66,0	1/1:1,36:37:99:1891,99,0	0/0:34,0:34:99:0,99,1512	1/1:2,32:35:90.31:1711,90,0	0/0:29,0:29:87.16:0,87,1252	1/1:3,26:29:81.25:1474,81,0	1/1:1,23:24:69.23:1264,69,0	1/1:2,37:39:99:1969,102,0	1/1:0,20:20:60.20:1134,60,0	1/1:0,15:15:42.14:810,42,0	1/1:0,29:29:75.26:1448,75,0	1/1:0,28:30:78.27:1505,78,0	1/1:0,18:18:54.19:1023,54,0	1/1:0,36:37:99:1886,99,0	1/1:0,16:16:39.13:753,39,0
chr10	18829338	.	AGTGTGTGTGTGTGTGTGT	A	637.23	PASS	AB=0.742;AC=3;AF=0.056;AN=54;BaseQRankSum=1.915;DP=593;FS=1.718;HRun=0;HaplotypeScore=277.5439;InbreedingCoeff=0.2961;MQ=62.98;MQ0=13;MQRankSum=-3.555;QD=15.54;ReadPosRankSum=0.184;VQSLOD=2.2405;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:37:27.08:0,27,560	0/0:10,0:10:24.01:0,24,1175	0/0:17,0:14:6.02:0,6,75	./.	0/0:13,0:13:18.06:0,18,968	0/0:18,0:17:21.04:0,21,495	0/0:35,0:35:39.12:0,39,944	0/0:14,0:14:6.02:0,6,155	0/0:19,0:18:21.07:0,21,600	0/0:20,0:20:21.07:0,21,761	0/0:9,0:9:12.04:0,12,666	0/0:26,0:26:24.07:0,24,656	0/0:26,0:25:36.59:0,37,1439	0/0:24,0:24:42.14:0,42,2345	0/0:24,0:23:39.12:0,39,958	0/1:15,8:22:29.60:583,0,30	0/0:22,0:21:36.12:0,36,2079	1/1:14,4:18:3.01:145,3,0	0/0:28,0:28:18.05:0,18,483	0/0:9,0:9:6.02:0,6,153	0/0:37,0:36:30.09:0,30,883	0/0:18,0:18:18.06:0,18,781	0/0:14,0:12:8.98:0,9,457	0/0:26,0:24:29.72:0,30,1286	0/0:14,0:14:3.01:0,3,118	0/0:25,0:24:30.09:0,30,1324	0/0:22,0:22:39.13:0,39,2186	0/0:19,0:18:42.14:0,42,2575
chr10	18829384	.	TGTGTGG	T	3596.03	PASS	AB=0.965;AC=33;AF=0.589;AN=56;BaseQRankSum=0.962;DP=621;FS=3.757;HRun=0;HaplotypeScore=120.8260;InbreedingCoeff=0.0052;MQ=60.93;MQ0=35;MQRankSum=-0.975;QD=7.62;ReadPosRankSum=0.394;VQSLOD=2.2329;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:13.79:0,14,376	0/1:12,0:11:31.63:32,0,293	0/0:39,0:14:41.91:0,42,390	0/0:46,0:28:63.67:0,64,651	0/1:29,0:28:99:346,0,272	1/1:3,13:16:6.02:130,6,0	0/1:4,18:23:1.12:147,0,1	1/1:14,0:12:35.98:320,36,0	0/1:15,0:13:67.40:67,0,128	0/1:18,0:18:99:169,0,187	0/1:12,0:12:99:126,0,220	0/1:29,0:29:12.65:13,0,18	0/1:21,0:20:99:160,0,304	0/1:24,0:23:75.07:75,0,534	1/1:1,12:14:12.04:276,12,0	0/1:25,0:24:40.52:41,0,290	0/1:24,0:23:99:172,0,504	0/0:16,0:15:8.73:0,9,205	1/1:1,10:11:32.45:310,32,0	1/1:16,0:16:44.85:378,45,0	1/1:27,1:27:8.96:125,9,0	1/1:15,1:17:13.23:267,13,0	1/1:25,0:23:1.52:28,2,0	1/1:28,0:28:14.19:85,14,0	1/1:1,21:21:3.01:74,3,0	0/1:21,0:20:99:251,0,248	0/0:19,0:19:23.21:0,23,607	0/1:21,0:19:5.10:5,0,707
chr10	18829386	.	TGTGG	T	4032.28	PASS	AB=1.000;AC=33;AF=0.589;AN=56;BaseQRankSum=1.430;DP=617;FS=1.379;HRun=0;HaplotypeScore=106.3192;InbreedingCoeff=0.1559;MQ=63.50;MQ0=35;MQRankSum=-0.819;QD=9.10;ReadPosRankSum=1.209;VQSLOD=2.9332;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:48.67:0,49,430	0/1:11,0:10:37.67:38,0,116	0/0:41,0:16:47.90:0,48,439	0/0:48,0:30:69.67:0,70,685	0/1:26,0:25:53.86:359,0,54	1/1:17,0:16:6.02:84,6,0	0/1:23,0:23:1.17:82,0,1	1/1:15,0:13:38.96:340,39,0	0/0:15,0:13:13.40:0,13,171	0/1:16,0:16:9.76:262,0,10	0/1:14,0:14:53.67:182,0,54	1/1:1,26:27:3.01:63,3,0	0/1:21,0:20:99:169,0,167	0/1:25,0:24:97.45:97,0,300	1/1:14,0:13:12.04:165,12,0	0/0:25,0:24:13.88:0,14,307	0/1:25,0:24:99:218,0,294	0/0:15,0:14:22.31:0,22,219	1/1:11,0:11:32.44:272,32,0	1/1:16,0:16:44.98:415,45,0	1/1:6,22:25:8.39:105,8,0	1/1:5,15:19:29.86:332,30,0	1/1:4,21:22:7.88:159,8,0	1/1:4,24:27:14.61:306,15,0	1/1:22,0:21:3.01:42,3,0	0/1:20,0:19:99:281,0,110	0/1:18,0:18:5.24:5,0,287	0/1:20,0:18:54.62:55,0,386
chr10	18829388	.	TGG	T	4300.03	PASS	AB=0.925;AC=37;AF=0.661;AN=56;BaseQRankSum=0.479;DP=607;FS=1.421;HRun=2;HaplotypeScore=91.2007;InbreedingCoeff=0.3890;MQ=65.63;MQ0=31;MQRankSum=-0.792;QD=9.95;ReadPosRankSum=-0.026;VQSLOD=1.6542;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:57.84:0,58,443	0/1:10,1:10:8.05:156,0,8	0/0:41,0:16:47.90:0,48,439	0/0:50,0:32:75.24:0,75,733	1/1:27,0:26:43.14:522,43,0	1/1:17,0:16:6.01:63,6,0	0/1:23,0:23:1.51:48,0,2	1/1:15,0:13:38.96:340,39,0	0/0:14,0:14:29.60:0,30,209	1/1:15,0:15:44.88:412,45,0	1/1:13,1:14:22.07:350,22,0	1/1:27,0:27:2.93:30,3,0	0/1:21,0:21:19.87:261,0,20	0/1:22,0:22:53.56:116,0,54	1/1:14,0:13:12.01:110,12,0	0/0:26,0:25:50.92:0,51,388	0/1:23,0:23:82.55:225,0,83	0/0:15,0:14:31.39:0,31,232	1/1:11,0:11:32.43:258,32,0	1/1:17,0:17:47.97:416,48,0	1/1:27,0:24:5.98:51,6,0	1/1:19,0:18:21.43:214,21,0	1/1:24,0:22:7.23:65,7,0	1/1:29,0:27:14.59:146,15,0	1/1:22,0:21:3:28,3,0	1/1:21,0:20:13.30:339,13,0	0/1:7,8:15:57.33:57,0,71	0/1:16,0:15:89.35:94,0,89
chr10	18829613	.	G	GGTTT	13386.73	PASS	AB=0.868;AC=26;AF=0.464;AN=56;BaseQRankSum=-7.138;DP=700;FS=1.635;HRun=0;HaplotypeScore=115.0883;InbreedingCoeff=0.8433;MQ=63.65;MQ0=1;MQRankSum=-0.117;QD=36.88;ReadPosRankSum=-0.854;VQSLOD=4.9292;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:93.32:0,93,1481	0/0:11,0:11:21.07:0,21,334	0/0:30,0:23:11.15:0,11,159	0/0:41,0:35:20.91:0,21,294	0/0:22,0:22:35.93:0,36,527	1/1:5,18:23:48.16:1148,48,0	1/1:16,12:29:30.10:718,30,0	0/1:35,7:42:14.65:589,0,15	0/0:13,0:13:30.10:0,30,478	0/0:18,0:18:36.11:0,36,532	0/0:9,0:9:9.03:0,9,143	1/1:7,14:21:42.14:1005,42,0	0/0:22,0:22:48.16:0,48,761	0/0:28,0:28:57.17:0,57,864	1/1:4,21:25:60.21:1434,60,0	1/1:4,16:22:45.15:1077,45,0	0/0:27,0:27:66.23:0,66,1048	1/1:8,14:24:36.12:861,36,0	0/1:22,3:25:32.71:270,0,33	1/1:10,14:25:42.10:866,42,0	1/1:10,13:26:40.38:920,40,0	1/1:9,16:26:54.03:1128,54,0	1/1:7,8:15:21:412,21,0	1/1:10,25:35:57.43:1735,57,0	1/1:2,22:24:54.18:1224,54,0	0/0:33,0:32:63.10:0,63,909	0/0:29,0:29:63.20:0,63,980	0/0:8,0:8:19.93:0,20,332
chr10	18831110	.	TC	T	1555.19	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.710;DP=680;FS=0.601;HRun=1;HaplotypeScore=65.0122;InbreedingCoeff=0.9842;MQ=92.94;MQ0=0;MQRankSum=-4.089;QD=36.17;ReadPosRankSum=1.879;VQSLOD=4.0281;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:78.24:0,78,1190	0/0:11,0:11:33.11:0,33,513	0/0:30,0:30:87.20:0,87,1244	0/0:27,1:28:64.63:0,65,1066	0/0:20,0:20:60.19:0,60,913	0/0:28,0:28:81.26:0,81,1240	0/0:21,0:21:63.20:0,63,964	0/0:37,0:37:99:0,108,1641	0/0:33,0:33:99:0,99,1451	0/0:27,0:27:81.25:0,81,1223	0/0:13,0:13:39.07:0,39,544	0/0:37,0:37:99:0,111,1665	0/0:24,0:24:72.24:0,72,1116	0/0:40,0:40:99:0,120,1781	0/0:30,0:30:90.31:0,90,1406	1/1:0,28:28:78.26:1090,78,0	0/0:18,0:18:54.11:0,54,779	1/1:0,15:15:42.14:587,42,0	0/0:15,0:15:45.14:0,45,655	0/0:25,0:25:75.24:0,75,1149	0/0:27,0:27:72.20:0,72,1047	0/0:21,0:21:57.18:0,57,870	0/0:27,0:27:78.27:0,78,1219	0/0:23,0:23:69.17:0,69,1027	0/0:21,0:21:63.20:0,63,952	0/0:18,0:18:48.16:0,48,751	0/0:31,0:31:93.32:0,93,1449	0/0:5,0:5:12.04:0,12,188
chr10	18831442	.	G	GT	2611.98	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-12.067;DP=831;FS=0.000;HRun=1;HaplotypeScore=129.7954;InbreedingCoeff=0.9978;MQ=86.96;MQ0=0;MQRankSum=-1.580;QD=37.85;ReadPosRankSum=1.792;VQSLOD=3.2672;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:63.18:0,63,801	0/0:13,0:13:36.12:0,36,467	0/0:33,0:33:86.45:0,86,1038	0/0:23,0:22:54.17:0,54,679	0/0:25,0:25:75.24:0,75,973	0/0:20,0:20:51.15:0,51,648	0/0:24,0:24:69.22:0,69,895	0/0:35,0:35:93.29:0,93,1195	0/0:23,0:23:69.21:0,69,881	0/0:35,0:35:99:0,102,1312	0/0:23,0:23:66.21:0,66,857	0/0:50,0:50:99:0,147,1908	0/0:41,0:41:99:0,117,1504	0/0:29,0:29:87.25:0,87,1093	0/0:36,0:36:99:0,102,1324	1/1:2,47:49:99:1949,132,0	0/0:26,0:25:78.25:0,78,1012	1/1:1,19:20:54.15:785,54,0	0/0:18,0:18:54.18:0,54,701	0/0:27,0:27:72.23:0,72,935	0/0:50,0:50:99:0,144,1852	0/0:27,0:27:78.25:0,78,1012	0/0:22,0:22:66.19:0,66,841	0/0:33,0:33:99:0,99,1283	0/0:31,0:31:90.29:0,90,1169	0/0:31,0:31:90.29:0,90,1169	0/0:59,0:59:99:0,178,2279	0/0:7,0:7:21.05:0,21,258
chr10	18832773	.	C	CTG	40688.97	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-5.218;DP=797;FS=9.924;HRun=0;HaplotypeScore=99.4221;InbreedingCoeff=0.9994;MQ=76.71;MQ0=1;MQRankSum=-8.340;QD=53.12;ReadPosRankSum=4.809;VQSLOD=4.6335;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,52:55:99:2898,151,0	1/1:0,9:10:30.10:568,30,0	0/0:16,0:16:42.14:0,42,600	0/0:15,0:15:30.10:0,30,441	1/1:0,36:37:99:1976,105,0	1/1:1,19:20:51.17:985,51,0	1/1:1,19:21:57.20:1101,57,0	1/1:5,32:37:99:1910,105,0	1/1:5,25:30:69.24:1321,69,0	1/1:1,40:41:99:2327,123,0	1/1:0,33:33:96.33:1831,96,0	1/1:0,25:25:72.25:1391,72,0	1/1:0,32:32:93.32:1797,93,0	1/1:1,27:28:72.25:1390,72,0	1/1:1,30:32:87.30:1660,87,0	1/1:1,37:37:99:1913,99,0	1/1:0,22:22:66.23:1275,66,0	1/1:0,31:31:87.30:1659,87,0	1/1:2,15:17:48.16:879,48,0	1/1:4,25:29:75.26:1442,75,0	1/1:2,28:30:72.25:1391,72,0	1/1:1,31:32:87.30:1659,87,0	1/1:0,27:27:81.28:1564,81,0	1/1:0,37:37:99:2086,108,0	1/1:0,19:19:54.19:1043,54,0	1/1:0,29:29:87.30:1666,87,0	1/1:0,39:40:99:2144,111,0	1/1:0,14:14:42.14:811,42,0
chr10	18834655	.	A	AC	11922.18	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=16.324;DP=697;FS=0.922;HRun=4;HaplotypeScore=99.2964;InbreedingCoeff=0.9999;MQ=87.03;MQ0=0;MQRankSum=-2.680;QD=34.86;ReadPosRankSum=0.113;VQSLOD=4.5012;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,38:44:99:1460,108,0	0/0:15,0:15:45.12:0,45,503	0/0:30,0:30:81.20:0,81,900	0/0:21,0:21:48.13:0,48,544	0/0:31,0:31:81.21:0,81,906	1/1:0,25:25:66.22:903,66,0	1/1:2,20:22:54.18:739,54,0	1/1:2,22:24:66.21:886,66,0	1/1:0,24:24:69.23:944,69,0	0/0:28,0:28:75.21:0,75,849	0/0:21,0:21:60.16:0,60,671	1/1:2,23:25:57.18:780,57,0	0/0:22,0:22:60.17:0,60,680	0/0:18,0:18:54.15:0,54,610	1/1:2,24:26:69.23:944,69,0	0/0:13,0:13:36.10:0,36,408	0/0:47,0:47:99:0,135,1519	0/0:31,0:31:84.24:0,84,952	1/1:2,13:15:39.13:533,39,0	1/1:1,21:22:51.16:681,51,0	1/1:0,32:32:93.31:1272,93,0	1/1:2,13:15:36.12:492,36,0	1/1:2,18:20:51.17:690,51,0	1/1:1,24:25:63.21:862,63,0	1/1:0,23:23:54.18:738,54,0	0/0:34,0:34:99:0,99,1123	0/0:32,0:32:90.26:0,90,1020	0/0:12,0:12:36.03:0,36,374
chr10	18837249	.	C	CT	19584.36	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=11.487;DP=930;FS=4.251;HRun=2;HaplotypeScore=138.5178;InbreedingCoeff=0.9988;MQ=77.97;MQ0=0;MQRankSum=-6.498;QD=38.70;ReadPosRankSum=-1.324;VQSLOD=3.9211;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,48:50:99:1684,117,0	0/0:9,0:9:27.08:0,27,335	0/0:26,0:25:72.18:0,72,836	0/0:22,0:22:58.59:0,59,651	0/0:33,0:33:96.30:0,96,1190	1/1:0,29:29:81.23:1142,81,0	1/1:0,33:33:96.28:1359,96,0	1/1:2,28:30:84.24:1185,84,0	1/1:2,45:47:99:1891,135,0	0/0:33,0:33:96.29:0,96,1170	0/0:26,0:26:75.23:0,75,925	1/1:1,40:41:99:1617,114,0	0/0:43,0:43:99:0,129,1586	0/0:38,0:38:99:0,114,1400	1/1:1,37:38:99:1402,99,0	0/0:56,1:56:99:0,122,1928	0/0:37,0:37:99:0,108,1326	0/0:22,0:21:63.18:0,63,768	1/1:3,22:25:66.18:894,66,0	1/1:0,32:32:87.29:1253,87,0	1/1:1,71:72:99:2894,202,0	1/1:1,30:31:87.25:1230,87,0	1/1:3,20:23:63.17:873,63,0	1/1:0,32:32:81.15:1166,81,0	1/1:0,23:23:69.23:994,69,0	0/0:37,0:37:99:0,108,1327	0/0:35,0:35:99:0,102,1264	0/0:6,0:6:18.06:0,18,223
chr10	18837388	.	CTGGG	C	18279.45	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=23.081;DP=869;FS=7.947;HRun=0;HaplotypeScore=269.1973;InbreedingCoeff=0.9998;MQ=70.45;MQ0=0;MQRankSum=-22.624;QD=42.41;ReadPosRankSum=-2.093;VQSLOD=3.5374;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,45:47:99:1996,108,0	0/0:10,0:10:30.10:0,30,791	0/0:30,0:30:70.25:0,70,1993	0/0:23,0:23:66.15:0,66,1534	0/0:28,0:28:84.29:0,84,2286	1/1:0,26:26:75.26:1443,75,0	1/1:3,22:25:60.15:1119,60,0	1/1:4,18:22:54.17:993,54,0	1/1:2,39:41:99:2137,117,0	0/0:42,0:42:99:0,123,3172	0/0:20,0:20:57.20:0,57,1553	1/1:5,34:39:96.33:1849,96,0	0/0:41,0:41:99:0,117,3042	0/0:44,0:44:99:0,129,3438	1/1:1,37:38:99:1916,102,0	0/0:45,0:45:99:0,132,3441	0/0:34,0:34:99:0,99,2647	0/0:24,0:24:63.17:0,63,1492	1/1:3,17:20:45.09:771,45,0	1/1:4,17:21:48.16:908,48,0	1/1:7,36:43:75.26:1420,75,0	1/1:4,22:26:45.15:854,45,0	1/1:0,12:12:30.10:578,30,0	1/1:4,34:38:39.13:741,39,0	1/1:3,30:33:81.28:1555,81,0	0/0:37,0:37:99:0,108,2830	0/0:46,0:46:99:0,132,3560	0/0:14,0:14:39.13:0,39,1070
chr10	18837977	.	C	CTG	2660.27	PASS	AB=0.857;AC=32;AF=0.571;AN=56;BaseQRankSum=4.511;DP=638;FS=4.509;HRun=0;HaplotypeScore=169.6165;InbreedingCoeff=0.2579;MQ=41.05;MQ0=26;MQRankSum=-5.275;QD=5.45;ReadPosRankSum=-4.988;VQSLOD=2.0043;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:25,4:28:16.55:126,17,0	0/0:7,3:10:14.98:0,15,205	0/0:23,1:9:19.05:0,19,280	0/0:38,0:14:24.47:0,24,319	0/0:22,7:28:24.02:0,24,295	1/1:12,2:14:14.75:116,15,0	1/1:8,0:7:11.59:101,12,0	0/1:32,23:49:99:920,0,303	1/1:24,5:27:36.90:307,37,0	0/1:24,10:32:99:267,0,514	0/0:10,6:16:12.32:0,12,138	0/1:13,0:13:6.13:102,0,6	0/1:15,6:21:9.82:10,0,175	0/0:11,3:14:21.38:0,21,250	1/1:22,2:22:23.98:124,24,0	0/1:27,5:32:46.34:46,0,290	0/1:19,1:19:5.08:5,0,253	0/0:17,1:17:12.21:0,12,519	0/1:26,0:23:23.85:24,0,210	1/1:19,3:19:17.93:162,18,0	1/1:9,1:10:11.55:62,12,0	1/1:18,5:19:15.38:107,15,0	1/1:16,3:18:4.55:28,5,0	1/1:9,2:10:9.01:117,9,0	1/1:17,5:19:15.35:82,15,0	0/1:17,8:24:99:106,0,509	0/1:25,5:30:26.64:27,0,394	0/1:13,2:15:15.30:15,0,434
chr10	18837987	.	CTG	C	892.79	PASS	AB=0.873;AC=20;AF=0.357;AN=56;BaseQRankSum=6.159;DP=588;FS=1.853;HRun=0;HaplotypeScore=174.8192;InbreedingCoeff=-0.1105;MQ=38.12;MQ0=20;MQRankSum=-4.447;QD=2.34;ReadPosRankSum=-0.054;VQSLOD=2.8629;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:31,0:27:26.86:27,0,43	0/0:7,3:10:8.33:0,8,316	0/0:8,0:6:15.80:0,16,178	0/0:22,0:8:12:0,12,172	0/0:23,8:30:12.87:0,13,258	0/1:13,0:13:13.94:14,0,39	0/1:5,0:4:0:0,0,0	0/1:50,1:45:81.53:82,0,905	0/0:32,0:27:18.07:0,18,149	0/1:21,14:33:99:356,0,343	0/0:8,7:15:4.44:0,4,85	0/0:15,0:15:7.43:0,7,39	0/1:17,6:23:51.54:52,0,294	0/0:8,3:11:12.03:0,12,222	1/1:24,0:22:0.06:16,0,0	0/1:26,8:34:99:103,0,257	0/1:17,2:18:30.59:31,0,209	0/1:16,3:18:61.29:61,0,475	0/0:21,0:18:13.95:0,14,381	1/1:18,0:15:0.47:1,0,0	0/0:10,0:10:0.28:0,0,0	0/0:20,1:17:4.47:0,4,38	1/1:21,0:20:2.94:18,3,0	0/0:10,0:9:3.01:0,3,54	1/1:24,0:21:5.70:39,6,0	0/1:15,9:23:99:141,0,448	0/1:21,6:27:59.44:59,0,296	0/1:11,2:13:41.21:41,0,460
chr10	18837989	.	G	GTCTCTGTCTC	6224.79	PASS	AB=0.922;AC=38;AF=0.731;AN=52;BaseQRankSum=-2.629;DP=586;FS=3.225;HRun=0;HaplotypeScore=204.1689;InbreedingCoeff=0.3379;MQ=37.51;MQ0=21;MQRankSum=-0.573;QD=12.81;ReadPosRankSum=4.196;VQSLOD=3.7394;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:24:3.26:10,3,0	1/1:9,1:10:13.99:388,14,0	0/0:9,0:5:6.02:0,6,82	0/0:18,0:5:0:0,0,0	0/1:18,15:32:1.91:115,0,2	1/1:13,0:13:0.25:1,0,0	./.	0/1:53,0:48:33.35:429,0,33	0/0:32,0:27:0.46:0,0,32	1/1:27,11:36:66.39:1356,66,0	1/1:15,1:16:0.84:117,1,0	1/1:14,0:14:5.95:93,6,0	1/1:15,10:26:18.06:570,18,0	1/1:11,1:12:10.10:260,10,0	1/1:24,0:22:0.55:2,1,0	1/1:33,0:33:13.67:275,14,0	1/1:10,6:17:9.03:253,9,0	1/1:19,0:18:29.86:622,30,0	0/1:20,0:17:24.64:29,0,25	./.	0/0:9,0:9:2.04:0,2,6	0/1:17,0:15:0:0,0,0	1/1:21,0:20:0.94:3,1,0	0/0:10,0:9:2.90:0,3,52	1/1:23,0:20:2.45:5,2,0	1/1:24,0:23:34.94:739,35,0	1/1:28,0:28:20.06:612,20,0	1/1:13,0:13:26.94:346,27,0
chr10	18837997	.	C	CTCTCTCTG	5057.70	PASS	AB=0.946;AC=37;AF=0.712;AN=52;BaseQRankSum=-2.491;DP=570;FS=0.000;HRun=0;HaplotypeScore=195.3964;InbreedingCoeff=0.1911;MQ=35.96;MQ0=23;MQRankSum=-0.176;QD=10.00;ReadPosRankSum=7.201;VQSLOD=2.3937;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:23:0.20:0,0,0	1/1:9,1:10:5.84:277,6,0	0/0:10,0:2:6.02:0,6,152	0/0:13,0:3:3.01:0,3,30	1/1:30,0:29:3.01:87,3,0	0/0:10,0:10:0.99:0,1,2	./.	0/1:54,0:49:77.74:285,0,78	0/1:33,0:28:10.22:10,0,26	1/1:38,0:36:19.83:1308,20,0	1/1:17,1:18:0.76:80,1,0	1/1:11,0:13:5.95:74,6,0	1/1:26,1:27:18.30:425,18,0	0/1:13,0:13:4.51:230,0,5	1/1:18,0:19:0.72:2,1,0	0/1:12,17:30:1.30:132,0,1	0/1:17,0:16:48.94:227,0,49	1/1:19,0:17:10.49:448,10,0	0/1:18,0:14:7.65:8,0,49	./.	1/1:11,0:10:0.47:1,0,0	0/1:21,0:17:0.07:0,0,0	1/1:18,0:17:0.47:1,0,0	0/0:9,0:9:3.01:0,3,63	1/1:23,0:20:1.98:4,2,0	1/1:16,8:24:26.21:705,26,0	1/1:14,14:28:20.36:460,20,0	1/1:12,0:12:24.13:291,24,0
chr10	18838011	.	CTTTGTGTGTGTGTGTGTA	C	615.22	PASS	AB=0.961;AC=18;AF=0.375;AN=48;BaseQRankSum=0.360;DP=463;FS=0.724;HRun=0;HaplotypeScore=197.3780;InbreedingCoeff=0.4690;MQ=33.64;MQ0=24;MQRankSum=-1.506;QD=4.13;ReadPosRankSum=-0.199;VQSLOD=2.7930;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:19:2.27:7,2,0	0/0:11,0:11:7.71:0,8,144	0/0:15,0:2:6.02:0,6,110	0/0:19,0:3:0.89:0,1,2	0/0:23,0:23:8.98:0,9,196	1/1:3,0:4:5.91:156,6,0	1/1:6,0:6:2.94:18,3,0	1/1:29,0:26:39.14:304,39,0	0/1:27,0:22:41.99:42,0,134	0/0:32,0:31:32.51:0,33,922	0/0:21,0:19:2.18:0,2,59	1/1:6,0:6:0.89:2,1,0	0/1:21,0:22:25.43:25,0,329	0/0:13,0:13:5.66:0,6,31	./.	0/0:25,0:25:23.54:0,24,622	0/0:17,0:16:16.72:0,17,333	0/0:19,0:17:28.74:0,29,732	1/1:8,0:6:5.97:155,6,0	0/0:10,0:9:0:0,0,0	./.	./.	1/1:4,7:12:3.01:46,3,0	1/1:9,1:10:0.86:2,1,0	./.	0/0:21,0:21:12.87:0,13,551	0/0:19,0:19:14.13:0,14,478	0/0:10,0:10:14.95:0,15,230
chr10	18838013	.	TTG	T	1853.96	PASS	AB=0.909;AC=25;AF=0.625;AN=40;BaseQRankSum=0.809;DP=408;FS=11.227;HRun=0;HaplotypeScore=126.0631;InbreedingCoeff=0.3729;MQ=34.38;MQ0=23;MQRankSum=-0.147;QD=7.54;ReadPosRankSum=1.352;VQSLOD=2.6870;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	1/1:6,3:9:6.21:31,6,0	0/0:15,0:2:6.02:0,6,95	0/0:19,0:3:2.98:0,3,21	1/1:12,11:23:5.68:26,6,0	1/1:3,0:3:2.88:15,3,0	0/0:5,0:5:2.84:0,3,14	0/0:17,0:15:9.31:0,9,47	1/1:27,0:22:0.87:3,1,0	1/1:11,21:31:71.90:773,72,0	1/1:13,7:18:3.39:18,3,0	./.	1/1:11,11:22:17.37:138,17,0	0/0:6,5:11:0:0,0,0	./.	0/1:20,5:25:5.73:45,0,6	1/1:13,4:16:12.47:106,12,0	0/1:15,2:15:99:123,0,105	0/1:4,0:2:9.70:10,0,11	./.	./.	./.	./.	0/0:9,0:8:3.01:0,3,35	./.	1/1:10,11:21:40.47:354,40,0	1/1:10,9:19:30.75:227,31,0	1/1:3,4:7:14.54:116,15,0
chr10	18838021	.	GTGTGTGTA	G	2101.78	PASS	AB=1.000;AC=31;AF=0.738;AN=42;BaseQRankSum=2.173;DP=412;FS=34.203;HRun=0;HaplotypeScore=143.2323;InbreedingCoeff=0.1614;MQ=34.92;MQ0=23;MQRankSum=-1.923;QD=6.78;ReadPosRankSum=2.993;VQSLOD=1.2201;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:18,0:15:0.09:0,0,0	1/1:8,0:8:6.48:60,6,0	0/0:14,0:2:5.96:0,6,45	0/0:18,0:3:2.60:0,3,10	1/1:21,1:22:0.49:20,0,0	1/1:3,0:3:3.01:68,3,0	1/1:6,0:5:1.25:3,1,0	1/1:15,0:14:33.09:195,33,0	0/1:28,0:22:42.43:42,0,53	1/1:36,0:34:53.02:568,53,0	1/1:19,0:17:5.05:46,5,0	./.	1/1:21,2:23:27.74:287,28,0	1/1:14,0:14:3.30:24,3,0	./.	0/1:27,0:27:12.55:13,0,267	0/1:19,0:18:28.82:62,0,29	0/1:23,0:21:42.60:43,0,581	1/1:4,0:2:3.90:76,4,0	./.	./.	./.	./.	0/0:8,0:7:2.90:0,3,16	./.	1/1:21,0:21:36.35:359,36,0	1/1:19,0:19:28.81:244,29,0	1/1:4,1:5:8.78:118,9,0
chr10	18838023	.	GTGTGTA	G	2824.87	PASS	AB=1.000;AC=31;AF=0.738;AN=42;BaseQRankSum=0.845;DP=411;FS=30.796;HRun=0;HaplotypeScore=135.4265;InbreedingCoeff=0.2074;MQ=35.15;MQ0=22;MQRankSum=-2.012;QD=9.11;ReadPosRankSum=1.764;VQSLOD=1.2437;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:18,0:15:0:0,0,0	1/1:5,3:8:6.49:138,6,0	0/0:14,0:2:5.96:0,6,45	0/0:18,0:3:2.68:0,3,11	1/1:21,0:21:11.19:70,11,0	1/1:3,0:3:3.01:50,3,0	1/1:6,0:5:1.25:3,1,0	1/1:15,0:14:33.09:195,33,0	0/1:28,0:22:27.22:42,0,27	1/1:36,0:34:59.91:663,60,0	1/1:10,9:17:5.31:63,5,0	./.	1/1:24,0:24:35.50:330,35,0	1/1:15,0:15:3.70:24,4,0	./.	0/1:24,0:26:12.71:13,0,177	0/1:20,0:19:7.55:157,0,8	0/1:23,0:22:47.83:48,0,399	1/1:4,0:2:3.90:56,4,0	./.	./.	./.	./.	0/0:8,0:7:2.90:0,3,16	./.	1/1:20,0:20:43.65:485,44,0	1/1:17,1:19:31.44:481,31,0	1/1:5,0:5:8.79:132,9,0
chr10	18838029	.	ATGTG	A	1367.29	PASS	AB=1.000;AC=26;AF=0.565;AN=46;BaseQRankSum=1.218;DP=403;FS=43.383;HRun=0;HaplotypeScore=130.7648;InbreedingCoeff=0.5179;MQ=34.39;MQ0=20;MQRankSum=-0.525;QD=6.54;ReadPosRankSum=1.176;VQSLOD=1.3027;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:16:2.99:0,3,23	1/1:7,0:7:6.47:54,6,0	./.	./.	1/1:18,1:19:10.31:91,10,0	0/1:4,0:4:17.95:18,0,19	0/1:8,0:7:0:0,0,0	0/0:14,0:14:4.20:0,4,22	0/0:23,0:17:8.84:0,9,55	1/1:33,4:37:28.83:357,29,0	1/1:19,0:17:5.09:40,5,0	1/1:9,0:9:2.98:21,3,0	1/1:18,2:21:19.78:190,20,0	1/1:12,1:14:2.10:5,2,0	./.	0/0:24,0:24:14.81:0,15,210	1/1:19,0:19:8.03:109,8,0	0/0:23,0:22:25.24:0,25,373	1/1:4,0:2:0.06:19,0,0	./.	./.	0/0:7,0:6:0:0,0,0	0/0:9,0:9:2.98:0,3,22	0/0:9,0:8:3:0,3,25	0/0:9,0:8:3:0,3,25	1/1:20,2:22:21.90:259,22,0	1/1:15,3:18:21.02:277,21,0	1/1:4,1:5:6.01:74,6,0
chr10	18839676	.	ATT	A	7029.86	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=8.055;DP=578;FS=1.111;HRun=10;HaplotypeScore=117.5341;InbreedingCoeff=0.9821;MQ=76.04;MQ0=1;MQRankSum=-2.530;QD=26.43;ReadPosRankSum=1.105;VQSLOD=4.4669;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,34:39:87.11:946,87,0	0/0:1,0:8:17.47:0,17,60	0/0:19,0:14:24.44:0,24,243	0/0:22,1:12:7.96:0,8,86	0/0:5,0:30:59.64:0,60,206	1/1:2,17:19:51.13:568,51,0	1/1:0,10:10:27.07:301,27,0	1/1:7,16:23:48:492,48,0	1/1:1,16:16:36.09:401,36,0	0/0:2,0:27:63.43:0,63,238	0/0:3,0:25:50.10:0,50,171	1/1:3,15:18:39.09:435,39,0	0/0:3,1:32:27.03:0,27,201	0/0:2,0:16:30.45:0,30,120	1/1:1,12:13:30.08:334,30,0	0/0:1,0:22:44.92:0,45,154	0/0:3,0:26:54.90:0,55,189	0/0:1,0:23:49.91:0,50,171	1/1:4,17:21:48.10:526,48,0	1/1:2,27:29:78.19:869,78,0	1/1:0,11:11:33.09:368,33,0	1/1:1,5:6:15.04:167,15,0	1/1:5,21:26:57.05:619,57,0	1/1:0,12:12:30.08:334,30,0	1/1:1,21:22:60.16:669,60,0	0/0:6,0:24:47.93:0,48,202	0/0:2,0:23:44.92:0,45,155	0/0:5,0:13:12.48:0,12,43
chr10	18839799	.	TAC	T	9085.34	PASS	AB=0.952;AC=29;AF=0.518;AN=56;BaseQRankSum=16.506;DP=616;FS=2.409;HRun=0;HaplotypeScore=117.3475;InbreedingCoeff=0.9193;MQ=64.22;MQ0=8;MQRankSum=0.865;QD=27.78;ReadPosRankSum=-0.196;VQSLOD=5.8988;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,31:28:84.19:1019,84,0	0/0:12,0:12:33.10:0,33,522	0/1:19,0:4:27.62:28,0,72	0/0:14,0:7:9:0,9,80	0/0:24,0:24:57.17:0,57,897	1/1:3,12:15:30.10:374,30,0	1/1:1,22:23:51.12:619,51,0	1/1:10,15:25:45.14:568,45,0	1/1:5,22:27:63.20:794,63,0	0/0:27,0:27:54.18:0,54,897	0/0:20,0:20:60.19:0,60,970	1/1:2,23:25:66.17:812,66,0	0/0:19,0:19:57.17:0,57,920	0/0:26,0:26:69.24:0,69,1144	1/1:2,15:18:33.11:413,33,0	0/0:29,0:29:66.21:0,66,1071	0/0:32,0:32:75.23:0,75,1213	0/0:19,0:19:48.12:0,48,762	1/1:6,12:18:39.12:492,39,0	1/1:7,23:30:84.26:1043,84,0	1/1:1,22:22:54.09:645,54,0	1/1:0,18:18:51.12:625,51,0	1/1:4,12:17:43.01:519,43,0	1/1:3,12:15:33.11:416,33,0	1/1:2,20:22:57.18:719,57,0	0/0:36,0:36:93.32:0,93,1543	0/0:24,0:24:54.17:0,54,862	0/0:7,0:7:18.06:0,18,299
chr10	18840140	.	CT	C	1166.36	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.010;DP=652;FS=4.373;HRun=11;HaplotypeScore=90.0859;InbreedingCoeff=0.7693;MQ=73.82;MQ0=1;MQRankSum=-1.004;QD=18.22;ReadPosRankSum=1.968;VQSLOD=4.5792;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,36:39:99:844,104,0	0/0:12,0:12:27.06:0,27,281	0/0:21,0:17:8.29:0,8,150	0/0:19,1:16:1.77:0,2,209	0/0:27,0:28:71.92:0,72,723	0/0:24,2:26:38.49:0,38,598	0/0:21,0:21:60.14:0,60,631	0/0:31,0:32:80.91:0,81,816	1/1:6,19:25:53.91:443,54,0	0/0:26,0:26:69.16:0,69,723	0/0:19,0:19:11.48:0,11,320	0/0:17,0:17:48.10:0,48,502	0/0:17,0:17:39.09:0,39,407	0/0:19,1:22:29.33:0,29,486	0/0:33,1:34:59.57:0,60,837	0/0:3,0:24:65.92:0,66,368	0/0:31,1:32:56.55:0,57,799	0/0:4,0:25:37.26:0,37,182	0/0:24,1:24:25.58:0,26,526	0/0:28,2:30:50.51:0,51,717	0/0:25,0:25:60.13:0,60,628	0/0:24,0:24:45.99:0,46,616	0/0:16,0:17:44.94:0,45,458	0/0:14,0:15:35.96:0,36,366	0/0:24,3:27:1.27:0,1,613	0/0:20,0:20:26.19:0,26,261	0/0:22,0:23:56.93:0,57,574	0/0:6,0:6:15.04:0,15,160
chr10	18840728	.	GTTGT	G	10387.46	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=14.773;DP=686;FS=4.820;HRun=0;HaplotypeScore=117.9416;InbreedingCoeff=0.9987;MQ=66.36;MQ0=5;MQRankSum=-4.648;QD=38.76;ReadPosRankSum=6.114;VQSLOD=4.8877;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:24:53.52:0,54,1195	1/1:0,7:7:18.06:311,18,0	0/0:39,0:36:70.45:0,70,1489	0/0:27,0:26:66.19:0,66,1425	1/1:2,14:15:36.12:625,36,0	0/0:28,0:28:78.27:0,78,1886	0/0:35,0:35:84.26:0,84,1963	0/0:27,0:27:66.22:0,66,1441	0/0:18,0:18:54.19:0,54,1362	1/1:7,32:39:90.31:1559,90,0	1/1:1,10:11:27.05:440,27,0	0/0:30,0:30:84.29:0,84,2044	1/1:1,15:16:36.12:631,36,0	1/1:2,21:23:48.16:841,48,0	0/0:20,0:20:54.18:0,54,1249	1/1:2,16:18:36.12:630,36,0	1/1:8,29:36:66.20:1122,66,0	1/1:3,26:28:65.81:1113,66,0	0/0:22,0:21:57.20:0,57,1367	0/0:18,0:18:45.14:0,45,1062	0/0:38,0:38:99:0,105,2517	0/0:15,0:15:42.14:0,42,976	0/0:25,0:25:60.17:0,60,1376	0/0:35,0:35:99:0,99,2445	0/0:17,0:17:51.16:0,51,1121	1/1:2,32:33:90.29:1542,90,0	1/1:3,21:23:51.07:890,51,0	1/1:0,14:14:39.13:683,39,0
chr10	18840824	.	TG	T	1426.26	PASS	AB=0.828;AC=22;AF=0.393;AN=56;BaseQRankSum=5.944;DP=511;FS=7.890;HRun=2;HaplotypeScore=100.7928;InbreedingCoeff=-0.2317;MQ=36.16;MQ0=70;MQRankSum=4.213;QD=4.17;ReadPosRankSum=-0.618;VQSLOD=-0.1324;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:24,4:23:80.71:81,0,82	0/0:6,0:4:0.77:0,1,13	0/0:12,0:2:6.02:0,6,80	0/0:14,0:3:6.02:0,6,80	1/1:7,5:12:7.81:56,8,0	0/0:21,5:21:8.81:0,9,69	0/1:38,4:33:32.48:32,0,63	0/0:12,1:10:19.16:0,19,186	0/1:13,7:16:73.60:142,0,74	0/1:19,1:14:52.27:52,0,189	1/1:5,0:3:1.51:3,2,0	0/1:12,5:17:15.81:16,0,34	0/1:15,6:19:34.25:210,0,34	1/1:14,6:17:16.44:110,16,0	0/1:10,3:10:0.38:0,0,41	1/1:7,10:13:8.46:114,8,0	0/1:20,5:23:88.75:283,0,89	0/1:8,7:12:35.61:186,0,36	0/1:6,1:5:23.19:29,0,23	0/1:9,3:10:2.60:3,0,34	0/0:35,4:34:1.16:0,1,107	0/0:17,2:15:2.15:0,2,38	0/0:9,3:11:0.76:0,1,36	0/1:27,2:27:67.87:77,0,68	0/0:19,5:21:1.18:0,1,88	0/1:19,3:16:87.38:87,0,135	0/1:10,6:11:8.55:93,0,9	0/0:3,1:3:0.14:0,0,20
chr10	18840825	.	G	GT	1454.86	PASS	AB=0.987;AC=23;AF=0.411;AN=56;BaseQRankSum=5.641;DP=523;FS=6.738;HRun=1;HaplotypeScore=108.4971;InbreedingCoeff=-0.2451;MQ=35.99;MQ0=71;MQRankSum=3.664;QD=4.04;ReadPosRankSum=-0.633;VQSLOD=-0.0553;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:29,1:25:75.30:80,0,75	0/0:6,0:4:0.56:0,1,13	0/0:11,0:2:6.02:0,6,80	0/0:12,0:3:6.02:0,6,80	1/1:11,1:12:7.81:55,8,0	0/0:24,0:19:5.17:0,5,52	0/1:42,0:33:32.48:32,0,63	0/0:13,0:10:19.16:0,19,186	0/1:21,0:17:54.12:142,0,54	0/1:25,0:18:59.33:59,0,184	1/1:6,0:4:1.20:3,1,0	0/1:19,0:18:7.69:8,0,34	0/1:20,0:18:34.70:210,0,35	1/1:20,1:18:16.22:110,16,0	0/1:15,0:12:0.38:0,0,41	1/1:17,1:14:7.65:113,8,0	0/1:23,1:23:87.49:289,0,87	0/1:14,1:12:34.82:201,0,35	0/1:9,0:7:23.32:30,0,23	0/1:12,0:10:2.62:3,0,34	0/0:42,0:37:0.73:0,1,106	0/0:15,0:15:2.15:0,2,38	0/0:10,0:11:0.76:0,1,36	0/1:27,2:27:63.66:64,0,68	0/0:23,0:20:1.07:0,1,88	0/1:16,0:15:99:106,0,135	0/1:15,0:10:8.39:93,0,8	0/1:5,0:4:2.44:2,0,19
chr10	18841857	.	C	CA	10410.88	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-18.875;DP=666;FS=8.687;HRun=1;HaplotypeScore=95.1708;InbreedingCoeff=0.9985;MQ=96.16;MQ0=0;MQRankSum=-4.065;QD=40.20;ReadPosRankSum=0.083;VQSLOD=4.5306;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,105,1363	0/0:10,0:10:24.07:0,24,288	0/0:35,0:35:99:0,102,1204	0/0:28,0:28:74.26:0,74,906	0/0:24,0:24:69.21:0,69,828	1/1:0,26:26:69.17:1007,69,0	1/1:0,24:24:54.18:809,54,0	1/1:2,22:24:66.22:989,66,0	0/0:24,0:24:69.21:0,69,880	0/0:33,0:33:93.27:0,93,1101	0/0:21,0:21:51.12:0,51,588	1/1:2,26:28:75.25:1124,75,0	0/0:32,0:32:90.26:0,90,1068	0/0:35,0:35:99:0,105,1248	1/1:1,27:28:78.26:1169,78,0	0/0:23,0:23:69.22:0,69,895	0/0:17,0:17:48.15:0,48,576	0/0:18,0:18:54.18:0,54,700	1/1:2,16:18:54.14:765,54,0	1/1:0,25:25:75.12:1048,75,0	1/1:0,28:28:78.26:1169,78,0	1/1:1,15:16:42.14:623,42,0	1/1:0,13:13:39.13:584,39,0	1/1:0,16:16:36.12:540,36,0	1/1:0,13:12:39.13:584,39,0	0/0:31,0:31:90.28:0,90,1080	0/0:34,0:34:99:0,99,1185	0/0:6,0:6:18.06:0,18,216
chr10	18842203	.	TCTCC	T	977.82	PASS	AB=1.000;AC=27;AF=0.614;AN=44;BaseQRankSum=-2.620;DP=168;FS=39.174;HRun=0;HaplotypeScore=44.3410;InbreedingCoeff=0.0021;MQ=90.97;MQ0=0;MQRankSum=0.310;QD=8.15;ReadPosRankSum=4.310;VQSLOD=0.8717;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:9,0:9:15.58:23,0,16	1/1:4,0:4:6.02:85,6,0	0/0:13,0:12:5.88:0,6,77	0/1:11,0:9:0.82:1,0,15	./.	1/1:5,0:5:8.99:92,9,0	0/1:8,0:8:22.34:42,0,22	0/1:17,0:17:20.54:124,0,21	0/1:4,0:4:13.93:24,0,14	./.	1/1:6,0:6:3.01:48,3,0	0/0:5,0:5:0.47:0,0,1	./.	0/0:5,0:5:2.94:0,3,18	1/1:5,0:5:1.38:35,1,0	0/1:4,0:4:6.80:121,0,7	1/1:6,0:6:6.02:76,6,0	0/0:3,0:3:3.01:0,3,32	1/1:11,0:11:14.89:121,15,0	./.	0/1:3,0:3:0:0,0,0	./.	0/1:3,0:3:9.95:23,0,10	1/1:8,0:8:5.95:44,6,0	1/1:4,0:4:5.60:74,6,0	1/1:3,4:7:9.03:133,9,0	0/1:5,0:5:7.71:41,0,8	./.
chr10	18842224	.	C	CT	387.98	PASS	AB=0.938;AC=32;AF=0.727;AN=44;BaseQRankSum=-3.328;DP=88;FS=40.028;HRun=0;HaplotypeScore=24.9984;InbreedingCoeff=0.1985;MQ=52.97;MQ0=0;MQRankSum=0.183;QD=5.88;ReadPosRankSum=0.164;VQSLOD=1.5526;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,1:7:9.75:70,10,0	1/1:2,0:2:0.24:5,0,0	0/1:4,0:3:0.80:1,0,27	./.	1/1:3,0:3:0.47:1,0,0	0/0:2,0:2:3.47:0,3,10	1/1:8,1:9:1.65:48,2,0	1/1:8,3:11:8.54:122,9,0	1/1:4,0:4:5.98:61,6,0	1/1:0,2:1:2.80:13,3,0	1/1:1,0:1:2.50:9,2,0	1/1:1,0:1:0.47:1,0,0	./.	1/1:1,0:1:2.84:14,3,0	1/1:2,0:2:0.80:8,1,0	1/1:4,0:4:2.07:18,2,0	0/0:3,0:3:2.80:0,3,7	0/1:2,0:2:12.85:36,0,13	0/0:4,0:3:0.94:0,1,2	./.	0/1:2,1:3:0:0,0,0	./.	0/1:3,0:3:7.12:34,0,7	./.	0/0:3,0:3:2.44:0,2,6	1/1:4,0:4:2.32:8,2,0	1/1:2,1:3:5.23:44,5,0	./.
chr10	18848712	.	G	GGT	5862.05	PASS	AB=0.860;AC=21;AF=0.375;AN=56;BaseQRankSum=0.679;DP=867;FS=17.735;HRun=0;HaplotypeScore=159.0472;InbreedingCoeff=0.6208;MQ=67.95;MQ0=23;MQRankSum=-3.104;QD=17.24;ReadPosRankSum=-1.372;VQSLOD=3.6626;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:43,0:37:44.22:301,44,0	1/1:15,2:17:33.08:458,33,0	0/0:59,0:20:22.18:0,22,233	0/0:65,0:34:35.05:0,35,286	0/1:20,3:23:11.51:260,0,12	0/0:20,0:19:32.60:0,33,324	0/0:45,0:45:89.32:0,89,938	0/0:23,0:23:39.12:0,39,459	1/1:17,0:16:26.90:206,27,0	1/1:41,2:43:7.92:914,8,0	0/1:15,2:18:54.18:191,0,54	0/0:38,0:38:92.92:0,93,1009	1/1:18,7:25:14.77:673,15,0	1/1:26,2:28:51.63:726,52,0	0/0:33,0:33:71.68:0,72,798	0/0:22,0:22:26.66:0,27,269	0/1:18,14:32:7.10:291,0,7	0/1:26,0:26:24.84:25,0,295	0/0:25,0:24:35.67:0,36,376	0/0:21,0:21:26.82:0,27,292	0/0:67,0:66:94.41:0,94,1075	0/0:18,0:17:39.03:0,39,430	0/0:22,0:22:45.11:0,45,521	0/0:47,0:47:99:0,108,1223	0/0:19,0:19:35.86:0,36,386	1/1:36,3:39:66.14:1250,66,0	0/1:16,3:19:44:290,0,44	1/1:7,3:10:15.64:276,16,0
chr10	18848715	.	G	GTGT	1311.30	PASS	AB=1.000;AC=12;AF=0.214;AN=56;BaseQRankSum=9.867;DP=886;FS=12.633;HRun=0;HaplotypeScore=195.4422;InbreedingCoeff=0.1114;MQ=65.34;MQ0=28;MQRankSum=-3.239;QD=4.95;ReadPosRankSum=4.922;VQSLOD=1.7027;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:20,25:39:8.76:608,9,0	0/1:17,0:17:38.77:39,0,97	0/0:62,0:18:38.53:0,39,598	0/0:70,0:33:73.58:0,74,930	0/1:25,0:25:19.17:19,0,236	0/0:18,0:17:45.04:0,45,608	0/0:49,0:49:99:0,108,1633	0/0:23,0:23:56.95:0,57,818	1/1:7,11:17:25.53:543,26,0	0/1:40,0:40:48.16:48,0,515	0/0:19,0:19:8.95:0,9,314	0/0:39,0:38:99:0,99,1594	0/1:24,0:24:46.01:46,0,179	0/1:29,0:29:44.40:44,0,155	0/0:34,0:34:87.27:0,87,1342	0/0:22,0:22:53.74:0,54,736	0/0:34,0:34:3.19:0,3,357	0/0:27,0:27:52.29:0,52,802	0/0:25,0:24:68.94:0,69,929	0/0:19,0:19:42.08:0,42,614	0/0:69,0:68:99:0,150,2243	0/0:21,0:20:51.17:0,51,801	0/0:23,0:23:57.19:0,57,900	0/0:47,0:47:99:0,123,1962	0/0:19,0:19:51.16:0,51,766	0/1:41,0:41:82.94:83,0,287	0/1:16,0:16:15.97:16,0,289	0/1:10,0:10:24.06:24,0,95
chr10	18848733	.	TTG	T	4439.76	PASS	AB=0.779;AC=24;AF=0.429;AN=56;BaseQRankSum=-7.381;DP=895;FS=5.410;HRun=0;HaplotypeScore=153.6309;InbreedingCoeff=0.8608;MQ=56.65;MQ0=38;MQRankSum=4.672;QD=11.27;ReadPosRankSum=4.547;VQSLOD=4.2366;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:39:12.83:0,13,106	0/0:10,0:16:11.78:0,12,106	0/0:71,0:15:10.26:0,10,138	0/0:75,0:20:13.66:0,14,93	0/0:9,0:22:10.69:0,11,141	1/1:7,11:17:21.06:241,21,0	1/1:16,34:51:59.74:654,60,0	1/1:15,8:23:24.03:259,24,0	0/0:15,0:18:15.44:0,15,128	0/0:22,0:34:59.09:0,59,632	0/0:7,0:18:21.33:0,21,227	1/1:18,23:40:51.15:597,51,0	0/0:16,0:29:39.01:0,39,441	0/0:14,0:31:23.84:0,24,199	1/1:14,20:35:32.85:367,33,0	0/0:13,0:30:8.96:0,9,70	0/0:31,0:36:50.39:0,50,391	0/0:27,0:26:41.34:0,41,426	1/1:16,6:21:13.57:202,14,0	1/1:7,6:14:17.99:183,18,0	1/1:32,32:63:31.48:408,31,0	0/1:8,13:21:3.35:316,0,3	1/1:9,13:22:26.29:293,26,0	1/1:18,28:46:57.17:671,57,0	1/1:6,12:18:21.06:246,21,0	0/0:23,0:40:49.82:0,50,416	0/1:13,1:18:3.17:3,0,180	0/0:6,0:9:20.95:0,21,171
chr10	18849168	.	C	CT	12813.54	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-17.242;DP=710;FS=0.284;HRun=1;HaplotypeScore=65.5209;InbreedingCoeff=0.9994;MQ=81.84;MQ0=0;MQRankSum=-0.621;QD=40.17;ReadPosRankSum=1.377;VQSLOD=5.4375;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,153,1952	0/0:14,0:14:42.14:0,42,545	0/0:26,0:26:74.29:0,74,911	0/0:22,1:23:30.90:0,31,602	0/0:21,0:21:63.19:0,63,802	1/1:0,24:24:66.22:989,66,0	1/1:0,30:30:75.25:1124,75,0	1/1:2,24:26:72.23:1057,72,0	0/0:17,0:17:48.16:0,48,622	0/0:27,0:27:81.25:0,81,1030	0/0:8,0:8:24.07:0,24,302	1/1:1,31:32:84.28:1258,84,0	0/0:28,0:28:81.18:0,81,977	0/0:24,0:24:72.23:0,72,934	1/1:0,27:27:75.25:1124,75,0	0/0:24,0:24:72.22:0,72,919	0/0:29,0:29:81.26:0,81,1051	0/0:28,0:28:81.21:0,81,1017	1/1:0,22:22:63.17:877,63,0	1/1:0,22:22:63.17:918,63,0	1/1:0,41:41:99:1753,117,0	1/1:1,24:25:63.17:908,63,0	1/1:1,20:21:60.14:871,60,0	1/1:1,28:29:72.24:1079,72,0	1/1:0,20:20:57.19:854,57,0	0/0:39,0:39:99:0,111,1430	0/0:23,0:23:69.22:0,69,896	0/0:8,0:8:24.08:0,24,312
chr10	18851246	.	C	CTG	1161.03	PASS	AB=0.832;AC=10;AF=0.179;AN=56;BaseQRankSum=5.752;DP=721;FS=4.078;HRun=0;HaplotypeScore=199.3649;InbreedingCoeff=-0.2067;MQ=43.95;MQ0=16;MQRankSum=-4.898;QD=3.82;ReadPosRankSum=-4.879;VQSLOD=1.7885;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:33:30.18:0,30,504	0/0:11,1:12:14.48:0,14,227	0/0:16,0:4:4.82:0,5,34	0/0:15,0:2:5.36:0,5,31	0/0:29,2:30:31.09:0,31,414	0/1:24,6:30:99:138,0,297	0/1:26,7:32:13.77:14,0,411	0/1:53,5:58:99:558,0,833	0/0:30,0:29:12.49:0,12,452	0/0:38,0:31:45.70:0,46,901	0/0:27,2:25:14.08:0,14,414	0/1:22,8:29:6.04:6,0,380	0/0:20,0:18:44.45:0,44,498	0/0:20,0:18:26.97:0,27,290	0/0:27,8:35:7.86:0,8,645	0/1:21,4:24:19.23:120,0,19	0/0:18,0:18:37.72:0,38,495	0/1:8,6:14:8.42:115,0,8	0/1:23,2:21:73.91:74,0,511	0/0:26,5:28:17.27:0,17,477	0/0:21,0:20:29.61:0,30,387	0/0:23,1:24:4.36:0,4,427	0/1:19,5:24:3.94:4,0,233	0/0:20,2:22:15.27:0,15,246	0/1:19,7:22:42.25:42,0,376	0/1:32,7:36:99:227,0,832	0/0:16,0:16:40.52:0,41,513	0/0:3,0:3:8.94:0,9,109
chr10	18851256	.	C	CTG	2431.52	PASS	AB=0.955;AC=15;AF=0.268;AN=56;BaseQRankSum=-1.234;DP=780;FS=0.000;HRun=0;HaplotypeScore=204.3142;InbreedingCoeff=-0.2274;MQ=45.68;MQ0=19;MQRankSum=-1.837;QD=5.44;ReadPosRankSum=0.434;VQSLOD=2.9127;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:40,0:37:8.65:229,9,0	0/0:12,0:12:11.46:0,11,158	0/1:34,0:8:7.12:7,0,79	0/0:37,0:10:14.68:0,15,113	0/1:29,0:28:19.13:102,0,19	0/1:31,1:32:18.09:18,0,367	0/0:31,3:33:22.96:0,23,346	0/1:38,29:67:99:1335,0,752	0/1:31,0:30:66.58:173,0,67	0/0:34,0:27:57.39:0,57,729	0/0:28,0:24:28.51:0,29,251	0/0:28,4:31:31.35:0,31,440	0/1:21,0:19:99:141,0,204	0/1:20,1:19:63.81:86,0,64	0/0:28,3:31:36.44:0,36,501	0/1:24,0:23:50.71:51,0,215	0/0:19,0:19:36.34:0,36,408	0/1:13,0:13:58.10:58,0,142	0/1:27,3:28:99:290,0,239	0/1:31,2:30:62.24:62,0,350	0/0:17,0:16:23.69:0,24,268	0/1:28,1:29:24.49:24,0,407	0/0:21,4:25:11.69:0,12,159	0/0:21,0:21:0.35:0,0,154	0/0:22,2:20:21.36:0,21,289	0/1:42,0:39:11.42:11,0,730	0/0:15,0:15:35.95:0,36,465	0/0:3,0:3:2.88:0,3,15
chr10	18851260	.	CTG	C	2745.62	PASS	AB=0.903;AC=28;AF=0.500;AN=56;BaseQRankSum=-1.640;DP=785;FS=10.245;HRun=0;HaplotypeScore=198.2089;InbreedingCoeff=-0.5710;MQ=45.48;MQ0=17;MQRankSum=0.114;QD=3.88;ReadPosRankSum=-0.233;VQSLOD=1.6093;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:38,0:35:6.50:163,7,0	0/0:10,0:10:8.97:0,9,100	0/0:42,0:11:10.48:0,10,141	0/1:46,0:16:17.34:17,0,163	1/1:29,0:28:6.30:84,6,0	0/1:22,9:31:99:167,0,155	0/1:17,14:30:38.43:38,0,118	0/1:66,0:66:99:338,0,273	0/1:32,0:31:37.96:240,0,38	0/1:31,1:26:99:115,0,256	0/1:27,0:23:93.54:116,0,94	0/1:17,15:31:60.09:60,0,175	0/1:20,1:19:2.62:233,0,3	1/1:20,0:18:19.60:142,20,0	0/1:18,15:33:95.24:95,0,255	0/1:27,0:26:77.73:100,0,78	0/1:20,0:20:32.13:32,0,224	0/1:13,0:13:32.18:32,0,66	0/1:28,0:26:61.46:61,0,270	0/1:31,1:30:81.05:81,0,158	0/1:14,1:14:44.58:45,0,78	0/1:24,4:28:99:262,0,101	0/1:13,13:26:58.11:77,0,58	0/0:9,14:23:11.60:0,12,80	0/1:17,6:19:98.94:124,0,99	0/1:36,3:36:99:214,0,275	0/1:15,1:16:48.77:49,0,196	0/1:3,0:3:4.25:17,0,4
chr10	18851270	.	C	CTCTG	1583.96	PASS	AB=1.000;AC=20;AF=0.357;AN=56;BaseQRankSum=3.513;DP=853;FS=6.058;HRun=0;HaplotypeScore=223.6768;InbreedingCoeff=-0.2037;MQ=47.81;MQ0=29;MQRankSum=0.468;QD=2.97;ReadPosRankSum=0.108;VQSLOD=1.8209;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:17,21:36:12.35:56,12,0	0/0:11,0:11:11.61:0,12,80	0/0:84,0:20:36.03:0,36,387	0/0:76,0:27:49.55:0,50,593	0/1:29,0:28:22.79:23,0,67	0/1:30,0:30:87.61:88,0,119	0/1:29,0:28:61.61:87,0,62	0/1:64,0:64:99:254,0,590	1/1:11,23:33:18.74:377,19,0	0/0:29,0:23:22.68:0,23,360	0/1:25,0:21:3.16:3,0,105	0/1:29,0:29:20.84:101,0,21	0/1:21,0:19:60.11:60,0,267	0/1:21,0:19:12.83:13,0,141	0/1:30,0:30:38.15:100,0,38	0/0:29,0:28:39.13:0,39,353	0/0:20,0:20:22.09:0,22,189	0/0:12,0:12:19.85:0,20,172	0/1:33,0:32:99:230,0,171	0/1:31,0:29:49.82:50,0,60	0/1:14,0:14:33.31:65,0,33	0/1:33,0:33:99:103,0,200	0/1:28,0:28:50.86:51,0,61	0/1:20,0:20:0.38:1,0,0	0/1:23,0:19:25.21:88,0,25	0/0:37,0:34:12.93:0,13,469	0/0:17,0:17:19.34:0,19,187	0/0:4,0:4:3.39:0,3,20
chr10	18852121	.	GGAGT	G	3138.13	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.879;DP=691;FS=7.198;HRun=0;HaplotypeScore=113.3787;InbreedingCoeff=0.9999;MQ=84.06;MQ0=0;MQRankSum=-6.687;QD=46.15;ReadPosRankSum=2.840;VQSLOD=4.0650;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,41:42:99:2130,105,0	0/0:12,0:12:36.12:0,36,999	0/0:23,0:23:69.23:0,69,1835	0/0:30,0:29:77.43:0,77,2029	0/0:23,0:23:69.23:0,69,1880	0/0:21,0:20:63.22:0,63,1809	0/0:23,0:23:69.24:0,69,1993	0/0:30,0:30:87.29:0,87,2370	1/1:0,26:26:54.19:1130,54,0	0/0:23,0:23:69.23:0,69,1933	0/0:17,0:17:45.15:0,45,1201	0/0:26,0:26:78.25:0,78,2129	0/0:18,0:18:54.17:0,54,1498	0/0:32,0:32:96.31:0,96,2575	0/0:35,0:35:99:0,105,3019	0/0:16,0:16:48.16:0,48,1285	0/0:22,0:22:66.23:0,66,1896	0/0:19,0:19:57.20:0,57,1586	0/0:18,0:18:54.18:0,54,1476	0/0:27,0:27:81.20:0,81,2080	0/0:36,0:36:99:0,105,2865	0/0:27,0:27:81.26:0,81,2115	0/0:20,0:20:60.21:0,60,1733	0/0:41,0:41:99:0,120,3264	0/0:21,0:21:60.21:0,60,1569	0/0:26,0:26:78.27:0,78,2252	0/0:23,0:23:69.22:0,69,1929	0/0:14,0:14:42.14:0,42,1166
chr10	18852539	.	GCTCTCTCTCTCTCTCT	G	4932.75	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=7.103;DP=655;FS=0.000;HRun=0;HaplotypeScore=243.3547;InbreedingCoeff=0.8585;MQ=67.81;MQ0=13;MQRankSum=-3.936;QD=25.96;ReadPosRankSum=1.587;VQSLOD=3.3318;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:50.73:0,51,2919	1/1:7,2:9:9.03:294,9,0	0/0:22,0:17:3.90:0,4,40	0/0:36,0:14:9.97:0,10,168	1/1:10,12:23:6.86:133,7,0	0/0:10,0:18:18.06:0,18,910	0/0:20,0:34:27.53:0,28,1142	0/0:25,0:24:15.40:0,15,311	0/0:26,0:26:21.01:0,21,775	1/1:13,10:23:21.03:365,21,0	1/1:5,7:11:3.01:132,3,0	0/0:21,0:23:34.33:0,34,1500	1/1:10,16:27:35.91:1565,36,0	1/1:8,12:23:24.08:994,24,0	0/0:16,0:30:36.11:0,36,1655	0/0:20,0:19:21.07:0,21,1016	1/1:12,11:23:9.03:305,9,0	0/0:17,0:16:6.02:0,6,331	0/0:17,0:19:15.05:0,15,980	0/0:17,0:20:24.08:0,24,1120	0/0:26,0:27:51.17:0,51,2340	0/0:23,0:23:21.07:0,21,848	0/0:24,0:23:12.04:0,12,763	0/0:19,0:32:12.91:0,13,393	0/0:23,0:23:17.47:0,17,546	1/1:9,9:18:23.03:372,23,0	1/1:6,10:17:12.04:529,12,0	1/1:10,4:14:6.02:244,6,0
chr10	18854205	.	C	CT	10159.89	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-14.539;DP=652;FS=1.344;HRun=1;HaplotypeScore=64.2350;InbreedingCoeff=0.9996;MQ=87.92;MQ0=0;MQRankSum=-1.363;QD=40.16;ReadPosRankSum=-1.084;VQSLOD=4.9900;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,153,1986	0/0:12,0:12:36.12:0,36,467	0/0:27,0:26:69.20:0,69,870	0/0:26,0:26:65.98:0,66,729	0/0:19,0:19:48.63:0,49,624	1/1:1,16:17:48.16:718,48,0	1/1:0,31:31:84.28:1259,84,0	1/1:1,21:22:66.22:971,66,0	0/0:21,0:21:63.20:0,63,818	0/0:27,0:27:81.21:0,81,1017	0/0:13,0:13:33.11:0,33,426	1/1:1,25:26:63.21:943,63,0	0/0:26,0:26:78.20:0,78,972	0/0:25,0:25:75.24:0,75,972	1/1:0,12:12:33.11:495,33,0	0/0:19,0:19:57.19:0,57,740	0/0:37,0:37:99:0,105,1297	0/0:17,0:17:48.16:0,48,622	1/1:0,14:15:42.12:604,42,0	1/1:0,14:14:42.14:630,42,0	1/1:1,28:29:78.26:1169,78,0	1/1:1,16:17:45.15:674,45,0	1/1:2,13:15:36.12:539,36,0	1/1:0,29:29:72.24:1079,72,0	1/1:0,26:26:72.24:1078,72,0	0/0:33,0:33:96.31:0,96,1245	0/0:34,0:34:99:0,102,1323	0/0:10,0:10:24.08:0,24,312
chr10	18854391	.	T	TC	17302.83	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=8.576;DP=486;FS=0.000;HRun=1;HaplotypeScore=218.7436;InbreedingCoeff=0.9154;MQ=70.54;MQ0=0;MQRankSum=-9.000;QD=38.20;ReadPosRankSum=5.634;VQSLOD=3.9115;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,28:29:75.12:1049,75,0	1/1:0,3:3:9.02:115,9,0	0/0:15,0:15:39.13:0,39,534	0/0:18,0:18:48.10:0,48,637	1/1:1,18:19:36.09:496,36,0	1/1:1,18:19:57.17:817,57,0	1/1:1,24:25:72.23:1046,72,0	1/1:0,13:13:39.13:582,39,0	1/1:1,18:19:54.07:795,54,0	1/1:0,21:21:63.21:932,63,0	1/1:1,10:11:20.86:259,21,0	1/1:0,19:19:57.19:837,57,0	1/1:0,24:24:69.16:991,69,0	1/1:0,21:21:63.08:868,63,0	1/1:0,20:20:60.20:853,60,0	1/1:0,20:20:60.15:861,60,0	1/1:0,14:14:33.04:460,33,0	1/1:2,13:15:42.04:576,42,0	1/1:0,12:12:36.12:525,36,0	1/1:0,16:16:42.14:614,42,0	1/1:2,15:17:23.73:303,24,0	1/1:0,9:9:21.07:308,21,0	1/1:3,12:14:24.06:312,24,0	1/1:1,11:12:27.09:391,27,0	1/1:1,23:24:66.22:974,66,0	1/1:0,27:27:81.24:1162,81,0	1/1:2,25:27:75.09:1085,75,0	1/1:0,2:2:6.02:91,6,0
chr10	18854396	.	AG	A	15109.91	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=8.871;DP=490;FS=4.569;HRun=2;HaplotypeScore=226.1677;InbreedingCoeff=0.9154;MQ=71.50;MQ0=0;MQRankSum=-9.239;QD=33.14;ReadPosRankSum=5.321;VQSLOD=3.9624;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:2,27:29:69.69:875,70,0	1/1:0,3:3:8.98:95,9,0	0/0:16,0:16:45.15:0,45,674	0/0:17,0:18:34.43:0,34,698	1/1:1,18:19:33.10:408,33,0	1/1:0,18:18:54.17:686,54,0	1/1:0,25:25:72.23:914,72,0	1/1:1,13:14:42.13:530,42,0	1/1:0,19:19:57.18:728,57,0	1/1:1,21:22:66.21:837,66,0	1/1:0,14:14:24.06:285,24,0	1/1:3,19:22:63.19:788,63,0	1/1:2,21:23:66.20:823,66,0	1/1:1,21:22:60.15:738,60,0	1/1:0,22:22:63.19:787,63,0	1/1:1,20:21:63.19:791,63,0	1/1:1,12:13:33.11:422,33,0	1/1:1,13:14:39.13:503,39,0	1/1:0,12:12:36.06:446,36,0	1/1:0,16:16:42.13:533,42,0	1/1:0,15:15:24.08:307,24,0	1/1:0,9:9:21.07:264,21,0	1/1:0,14:13:21.07:257,21,0	1/1:0,15:15:30.09:372,30,0	1/1:0,24:24:66.21:839,66,0	1/1:2,21:23:66.21:851,66,0	1/1:0,26:26:75.24:955,75,0	1/1:0,2:2:6.02:78,6,0
chr10	18854650	.	A	AGTGT	1940.41	PASS	AC=28;AF=0.519;AN=54;BaseQRankSum=-5.938;DP=404;FS=10.012;HRun=0;HaplotypeScore=88.1700;InbreedingCoeff=0.6420;MQ=80.99;MQ0=2;MQRankSum=1.041;QD=11.15;ReadPosRankSum=-0.638;VQSLOD=2.1050;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:20:2.55:22,3,0	1/1:3,3:6:3.01:73,3,0	0/0:31,0:24:0.38:0,0,135	0/0:39,0:32:10.54:0,11,190	1/1:11,7:18:4.26:76,4,0	0/0:9,0:9:4.56:0,5,33	0/0:17,0:18:9.01:0,9,84	0/0:7,0:18:22.27:0,22,199	1/1:8,0:9:8.67:60,9,0	1/1:11,0:11:9.91:126,10,0	1/1:3,3:7:3.01:73,3,0	0/0:14,0:14:6.01:0,6,56	1/1:7,1:8:6.02:115,6,0	1/1:7,7:15:14.72:273,15,0	0/0:10,0:13:11:0,11,96	1/1:11,0:11:5.99:49,6,0	1/1:9,12:20:27.09:570,27,0	1/1:11,0:11:5.20:48,5,0	0/0:11,0:11:7.48:0,7,48	./.	0/0:12,0:13:18.04:0,18,198	0/0:14,0:14:3:0,3,28	0/0:12,0:12:3:0,3,28	0/0:22,0:23:17.69:0,18,167	0/0:7,0:8:6.01:0,6,56	1/1:20,0:19:30:337,30,0	1/1:12,1:13:12.04:228,12,0	1/1:1,3:3:3.01:73,3,0
chr10	18854662	.	TGTGTG	T	852.62	PASS	AB=0.906;AC=17;AF=0.304;AN=56;BaseQRankSum=1.874;DP=372;FS=0.634;HRun=0;HaplotypeScore=81.5703;InbreedingCoeff=0.4333;MQ=76.48;MQ0=7;MQRankSum=-1.987;QD=6.18;ReadPosRankSum=3.402;VQSLOD=1.4949;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:36.11:0,36,601	0/0:7,0:7:12.04:0,12,217	0/0:28,0:19:27.50:0,28,762	0/0:32,0:25:56.59:0,57,719	0/0:18,0:18:23.67:0,24,299	0/1:7,0:6:12.38:86,0,12	1/1:16,0:15:8.32:42,8,0	0/1:15,1:16:24.42:278,0,24	0/0:12,0:12:19.04:0,19,294	0/0:9,0:9:22.31:0,22,392	0/0:8,0:8:0.69:0,1,67	0/1:4,9:13:22.58:69,0,23	0/0:10,0:9:12.01:0,12,181	0/0:12,0:12:18.06:0,18,393	0/1:14,0:14:33.42:45,0,33	0/0:11,0:10:24.08:0,24,435	0/0:19,0:18:33.58:0,34,659	0/0:9,0:9:18.06:0,18,337	0/1:6,0:6:5.41:127,0,5	0/0:8,0:7:3:0,3,25	1/1:14,0:12:20.32:212,20,0	1/1:12,0:12:2.68:11,3,0	1/1:11,0:11:2.68:11,3,0	1/1:23,0:22:15.91:73,16,0	1/1:6,0:5:8.69:71,9,0	0/0:17,0:16:36.11:0,36,599	0/0:12,0:12:16.56:0,17,314	0/0:7,0:5:9.02:0,9,133
chr10	18854663	.	GTGT	G	1604.60	PASS	AB=0.961;AC=21;AF=0.375;AN=56;BaseQRankSum=-0.706;DP=371;FS=3.882;HRun=0;HaplotypeScore=70.2888;InbreedingCoeff=0.5506;MQ=78.58;MQ0=7;MQRankSum=-2.080;QD=10.49;ReadPosRankSum=2.339;VQSLOD=2.8760;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:36.11:0,36,573	0/0:7,0:7:11.97:0,12,189	0/0:30,0:21:24.81:0,25,650	0/0:31,0:24:50.06:0,50,653	0/0:18,0:18:23.66:0,24,264	1/1:4,2:5:9.03:143,9,0	1/1:3,13:15:9.02:140,9,0	0/1:17,0:17:28.49:272,0,28	0/1:14,0:14:6.12:6,0,246	0/0:11,0:11:21.90:0,22,351	0/0:7,0:7:0.69:0,1,40	0/1:10,1:11:14.13:83,0,14	0/0:11,0:10:5.93:0,6,98	0/0:11,0:11:18.06:0,18,278	0/1:14,2:16:5.72:157,0,6	0/0:11,0:10:24.08:0,24,354	0/0:19,0:18:33.07:0,33,450	0/0:9,0:9:18.04:0,18,267	1/1:1,5:6:12.02:163,12,0	0/1:8,0:7:0:0,0,0	1/1:12,0:10:21.02:289,21,0	1/1:1,8:10:3.01:56,3,0	1/1:0,8:9:3.01:56,3,0	1/1:1,20:21:18.65:309,19,0	1/1:5,1:5:9.02:115,9,0	0/0:18,0:17:19.52:0,20,519	0/0:11,0:12:16.53:0,17,247	0/0:7,0:5:8.99:0,9,90
chr10	18854666	.	T	TGTG	1682.26	PASS	AB=0.935;AC=29;AF=0.518;AN=56;BaseQRankSum=-2.447;DP=443;FS=1.284;HRun=0;HaplotypeScore=117.7552;InbreedingCoeff=0.0001;MQ=76.87;MQ0=7;MQRankSum=-0.211;QD=5.59;ReadPosRankSum=-0.821;VQSLOD=2.7894;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:18:11.98:99,12,0	1/1:6,0:6:3.01:34,3,0	0/0:27,0:19:24.41:0,24,201	0/0:29,0:23:17.04:0,17,152	0/1:17,0:17:15.73:29,0,16	0/1:12,0:12:6.93:17,0,7	0/0:18,0:18:8.14:0,8,48	0/0:17,0:18:28.07:0,28,258	1/1:22,0:22:11.99:103,12,0	0/1:11,0:11:47.51:59,0,48	1/1:7,0:7:3.01:34,3,0	0/1:19,0:19:34.62:35,0,38	1/1:14,0:13:6.02:77,6,0	1/1:13,0:13:18.03:199,18,0	0/1:21,0:22:61.81:90,0,62	0/1:6,4:14:14.11:122,0,14	0/1:19,0:21:49.21:309,0,49	1/1:7,3:18:11.92:169,12,0	0/1:6,0:6:13.55:14,0,24	0/1:6,0:7:0:0,0,0	0/1:14,0:14:25.37:25,0,97	0/0:13,0:13:2.57:0,3,10	0/0:10,0:10:2.60:0,3,10	0/0:23,0:22:15.20:0,15,75	0/1:16,0:15:22.96:32,0,23	0/1:18,0:17:28.15:205,0,28	1/1:15,0:15:15.05:178,15,0	0/1:5,0:4:25.15:25,0,37
chr10	18854667	.	G	GTGT	1474.42	PASS	AB=0.874;AC=18;AF=0.321;AN=56;BaseQRankSum=-2.065;DP=427;FS=43.697;HRun=0;HaplotypeScore=112.9066;InbreedingCoeff=0.0199;MQ=77.10;MQ0=7;MQRankSum=1.039;QD=7.72;ReadPosRankSum=4.427;VQSLOD=0.8172;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:15:2.49:22,2,0	1/1:3,0:3:2.95:41,3,0	0/0:27,0:18:21.82:0,22,279	0/0:30,0:22:17.02:0,17,214	0/1:15,0:15:33.85:34,0,44	0/0:11,0:10:11.99:0,12,108	0/0:17,0:16:17.98:0,18,166	0/0:18,0:18:12.59:0,13,302	0/1:18,0:18:11.82:46,0,12	0/1:15,0:15:99:100,0,121	1/1:6,1:7:2.99:41,3,0	0/0:19,0:19:28.15:0,28,233	0/1:11,3:15:81.51:90,0,82	1/1:14,1:15:17.02:232,17,0	0/0:22,0:22:38.26:0,38,304	0/1:11,0:10:22.33:69,0,22	0/1:18,3:21:99:380,0,108	0/1:13,0:15:12.14:76,0,12	0/0:6,0:6:10.88:0,11,66	0/0:8,0:7:3:0,3,25	0/0:16,0:14:26.18:0,26,270	0/0:12,0:12:6:0,6,60	0/0:10,0:10:3:0,3,28	0/0:24,0:23:21.81:0,22,236	0/0:16,0:15:21.42:0,21,185	0/1:8,0:19:77.79:276,0,78	0/1:9,5:14:31.44:196,0,31	0/1:5,1:4:34.13:34,0,54
chr10	18854899	.	T	TC	1260.10	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-8.517;DP=665;FS=1.367;HRun=5;HaplotypeScore=66.4414;InbreedingCoeff=0.9839;MQ=84.45;MQ0=0;MQRankSum=-1.650;QD=34.06;ReadPosRankSum=1.748;VQSLOD=4.1916;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,120,1279	0/0:14,0:14:39.10:0,39,419	0/0:15,0:15:29.01:0,29,299	0/0:27,0:27:59.43:0,59,552	0/0:30,0:30:90.21:0,90,959	0/0:23,0:23:63.14:0,63,669	0/0:19,0:19:51.11:0,51,540	0/0:36,0:36:96.23:0,96,1026	0/0:26,0:26:72.18:0,72,773	0/0:23,0:23:57.14:0,57,613	0/0:27,0:27:81.17:0,81,854	0/0:22,0:22:57.13:0,57,604	0/0:25,0:25:57.13:0,57,606	0/0:26,0:26:69.12:0,69,720	0/0:30,0:30:87.20:0,87,927	1/1:0,22:22:66.21:869,66,0	0/0:19,0:19:51.13:0,51,548	1/1:1,14:15:39.13:513,39,0	0/0:24,0:24:63.14:0,63,663	0/0:29,0:29:78.18:0,78,830	0/0:25,0:25:72.18:0,72,774	0/0:25,0:25:72.16:0,72,765	0/0:24,0:24:69.17:0,69,742	0/0:18,0:18:51.11:0,51,540	0/0:19,0:19:57.14:0,57,613	0/0:22,0:21:54.13:0,54,581	0/0:32,0:32:87.20:0,87,925	0/0:4,0:4:12.03:0,12,129
chr10	18855422	.	GTC	G	3679.60	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=12.590;DP=654;FS=55.257;HRun=0;HaplotypeScore=144.7333;InbreedingCoeff=0.9408;MQ=54.72;MQ0=36;MQRankSum=-1.589;QD=14.15;ReadPosRankSum=4.585;VQSLOD=1.1810;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:21:2.45:9,2,0	1/1:8,5:12:21.07:281,21,0	0/0:24,0:19:30.87:0,31,355	0/0:15,0:15:34.55:0,35,427	1/1:16,10:25:24.01:272,24,0	0/0:25,0:24:18.52:0,19,291	0/0:35,0:32:23.92:0,24,594	0/0:42,0:41:99:0,99,1401	1/1:17,0:17:2.97:21,3,0	1/1:15,7:20:45.06:555,45,0	1/1:9,8:17:15.05:206,15,0	0/0:23,0:22:44.67:0,45,830	1/1:11,3:14:30.08:374,30,0	1/1:14,4:18:14.84:192,15,0	0/0:29,0:29:26.92:0,27,468	0/0:19,0:19:54.18:0,54,943	1/1:26,4:23:26.11:321,26,0	0/0:14,0:13:39.11:0,39,661	0/0:22,0:20:54.17:0,54,812	0/0:30,0:30:58.64:0,59,964	0/0:25,0:19:39.13:0,39,680	0/0:25,0:25:47.99:0,48,836	0/0:22,0:18:30.10:0,30,532	0/0:27,0:23:15.05:0,15,265	0/0:17,0:16:33.10:0,33,557	1/1:24,5:25:58.56:425,59,0	1/1:30,11:40:62.99:752,63,0	1/1:8,2:9:23.86:272,24,0
chr10	18855424	.	CTCTCTG	C	4043.86	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=13.726;DP=649;FS=57.073;HRun=0;HaplotypeScore=174.6326;InbreedingCoeff=0.9601;MQ=54.09;MQ0=36;MQRankSum=-1.496;QD=15.43;ReadPosRankSum=4.340;VQSLOD=0.7971;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:20:3.48:52,3,0	1/1:13,0:12:21.07:307,21,0	0/0:23,0:18:13.52:0,14,168	0/0:14,0:14:19.57:0,20,209	1/1:26,0:25:24.06:326,24,0	0/0:25,0:24:16.41:0,16,250	0/0:35,0:32:35.14:0,35,662	0/0:41,0:40:99:0,104,1572	1/1:8,8:16:15.05:209,15,0	1/1:21,0:19:34.48:465,34,0	1/1:18,0:18:15.05:213,15,0	0/0:22,0:21:30.75:0,31,805	1/1:17,0:17:21.81:369,22,0	1/1:18,0:18:14.67:202,15,0	0/0:29,0:29:26.78:0,27,450	0/0:20,0:20:57.12:0,57,1058	1/1:30,0:23:26.96:370,27,0	0/0:14,0:13:36.12:0,36,733	0/0:22,0:20:57.11:0,57,869	0/0:29,0:29:60.15:0,60,1137	0/0:24,0:18:39.10:0,39,682	0/0:25,0:25:47.83:0,48,831	0/0:20,0:16:30.57:0,31,604	0/0:26,0:22:15.05:0,15,218	0/0:18,0:17:30.10:0,30,601	1/1:30,0:26:60.11:496,60,0	1/1:41,0:40:58.96:750,59,0	1/1:10,0:9:20.32:286,20,0
chr10	18855426	.	C	CTG	4799.53	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=12.274;DP=642;FS=56.592;HRun=0;HaplotypeScore=145.7855;InbreedingCoeff=0.9264;MQ=53.73;MQ0=36;MQRankSum=-2.950;QD=18.68;ReadPosRankSum=4.861;VQSLOD=2.9367;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:19:2.84:14,3,0	1/1:8,7:14:21.07:365,21,0	0/0:21,0:16:31.63:0,32,347	0/0:14,0:14:36:0,36,418	1/1:12,12:23:24.08:398,24,0	0/0:25,0:24:17.62:0,18,253	0/0:36,0:33:18.90:0,19,508	0/0:39,0:38:99:0,103,1478	1/1:14,0:15:11.38:55,11,0	1/1:13,8:19:20.04:616,20,0	1/1:9,9:18:15.05:270,15,0	0/0:23,0:22:54.11:0,54,774	1/1:10,6:16:30.43:483,30,0	1/1:8,11:19:15.52:235,16,0	0/0:29,0:29:30.08:0,30,436	0/0:20,0:20:54.10:0,54,818	1/1:14,15:22:2.34:393,2,0	0/0:14,0:13:39.11:0,39,572	0/0:22,0:20:57.16:0,57,828	0/0:29,0:29:58.61:0,59,840	0/0:24,0:18:39.13:0,39,592	0/0:25,0:25:48.16:0,48,731	0/0:21,0:17:29.87:0,30,459	0/0:25,0:21:14.89:0,15,229	0/0:18,0:17:33.57:0,34,485	1/1:11,19:26:67.44:654,67,0	1/1:14,25:38:63.03:1002,63,0	1/1:4,6:9:10.36:317,10,0
chr10	18855428	.	CTG	C	1465.17	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=12.842;DP=626;FS=50.742;HRun=0;HaplotypeScore=151.3950;InbreedingCoeff=0.8512;MQ=53.08;MQ0=36;MQRankSum=-2.270;QD=5.88;ReadPosRankSum=2.621;VQSLOD=1.4765;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:13,7:18:2.95:25,3,0	1/1:15,0:14:20.59:133,21,0	0/0:15,0:11:10.24:0,10,182	0/0:10,0:10:3.04:0,3,244	1/1:23,0:22:21.27:113,21,0	0/0:26,0:25:15.52:0,16,271	0/0:35,0:32:19.59:0,20,593	0/0:41,0:40:99:0,112,1722	1/1:9,6:15:14.25:91,14,0	1/1:19,0:17:32.48:248,32,0	1/1:18,0:18:14.72:93,15,0	0/0:23,0:22:14.03:0,14,817	1/1:16,0:16:20.54:155,21,0	1/1:17,0:17:14.39:100,14,0	0/0:28,0:28:16.92:0,17,440	0/0:20,0:20:57.04:0,57,1013	1/1:30,0:23:27.84:167,28,0	0/0:14,0:13:36.12:0,36,693	0/0:21,0:19:57.12:0,57,922	0/0:30,0:30:60.12:0,60,1018	0/0:24,0:18:39.10:0,39,684	0/0:26,0:26:47.95:0,48,826	0/0:21,0:17:30.10:0,30,578	0/0:25,0:21:15.05:0,15,258	0/0:18,0:17:30.10:0,30,578	0/1:29,0:25:41.42:83,0,41	1/1:37,0:36:55.33:319,55,0	1/1:9,1:9:23.38:153,23,0
chr10	18855430	.	GTC	G	2624.82	PASS	AB=0.731;AC=23;AF=0.411;AN=56;BaseQRankSum=12.891;DP=620;FS=75.016;HRun=0;HaplotypeScore=147.3997;InbreedingCoeff=0.7909;MQ=50.15;MQ0=38;MQRankSum=-1.626;QD=10.63;ReadPosRankSum=3.220;VQSLOD=0.5291;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:18:2.06:8,2,0	1/1:11,4:14:21.06:262,21,0	0/0:12,0:9:8.35:0,8,141	0/0:8,0:8:12.04:0,12,189	1/1:11,10:20:22.85:214,23,0	0/0:25,0:24:15.49:0,15,205	0/0:35,0:32:3.94:0,4,492	0/0:42,0:41:99:0,105,1661	1/1:15,0:15:2.61:21,3,0	0/1:12,7:17:9.84:364,0,10	1/1:10,7:17:15.05:198,15,0	0/0:22,0:21:41.12:0,41,722	1/1:14,3:17:7.58:281,8,0	1/1:9,5:14:14.67:180,15,0	0/0:29,0:29:23.50:0,23,371	0/0:21,0:21:54.12:0,54,916	1/1:27,4:23:1.78:268,2,0	0/0:14,0:13:39.10:0,39,659	0/0:20,0:18:51.17:0,51,858	0/0:31,0:31:54.65:0,55,913	0/0:24,0:18:36.10:0,36,598	0/0:25,0:25:38.96:0,39,676	0/0:21,0:17:30.10:0,30,525	0/0:25,0:21:14.98:0,15,186	0/0:18,0:17:30.10:0,30,527	1/1:27,3:26:17.61:157,18,0	1/1:26,11:36:62.16:667,62,0	1/1:9,1:9:20.72:208,21,0
chr10	18855436	.	CTG	C	1362.74	PASS	AB=0.922;AC=23;AF=0.411;AN=56;BaseQRankSum=11.229;DP=605;FS=25.312;HRun=0;HaplotypeScore=149.3327;InbreedingCoeff=0.7438;MQ=46.01;MQ0=39;MQRankSum=-0.681;QD=5.08;ReadPosRankSum=0.375;VQSLOD=1.3361;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:16,7:20:5.44:19,0,5	1/1:15,0:14:23.46:147,23,0	0/0:6,0:5:6.01:0,6,75	0/0:5,0:5:12.02:0,12,165	1/1:22,0:21:13.77:97,14,0	0/1:26,0:25:9.43:9,0,137	0/0:38,0:34:14.16:0,14,505	0/0:38,0:37:99:0,108,1764	1/1:9,5:14:14.06:82,14,0	1/1:18,0:16:30.18:218,30,0	1/1:17,0:17:14.41:84,14,0	0/0:21,0:20:4.89:0,5,620	1/1:18,0:17:30.22:151,30,0	1/1:14,0:14:14.06:77,14,0	0/0:30,0:30:13.89:0,14,339	0/0:22,0:22:59.20:0,59,989	1/1:29,0:21:22.38:169,22,0	0/0:13,0:13:39.13:0,39,722	0/0:21,0:19:31.12:0,31,832	0/0:30,0:30:24.15:0,24,973	0/0:23,0:17:32.94:0,33,558	0/0:24,0:24:18.09:0,18,619	0/0:21,0:17:30.08:0,30,539	0/0:24,0:20:11.97:0,12,127	0/0:20,1:20:30.09:0,30,538	0/1:29,0:25:56.16:82,0,56	1/1:33,0:32:52.51:294,53,0	1/1:10,0:9:23.21:146,23,0
chr10	18855438	.	GTC	G	2467.91	PASS	AB=0.883;AC=21;AF=0.375;AN=56;BaseQRankSum=12.653;DP=605;FS=72.618;HRun=0;HaplotypeScore=145.5547;InbreedingCoeff=0.6981;MQ=44.52;MQ0=39;MQRankSum=-0.539;QD=9.95;ReadPosRankSum=1.802;VQSLOD=0.3665;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:21:3.28:11,3,0	1/1:13,3:15:21.94:246,22,0	0/0:6,0:5:2.99:0,3,23	0/0:2,0:2:3.01:0,3,32	1/1:14,9:22:22.75:201,23,0	0/0:24,0:23:9.44:0,9,129	0/0:36,0:32:2.99:0,3,401	0/0:38,0:37:99:0,102,1301	0/1:16,0:16:3.12:3,0,24	0/1:11,6:15:6.90:306,0,7	1/1:10,7:17:14.83:189,15,0	0/0:21,0:20:29.21:0,29,447	1/1:14,4:17:28.88:322,29,0	1/1:10,4:14:14.64:153,15,0	0/0:30,0:30:20.47:0,20,263	0/0:22,0:22:59.96:0,60,816	0/1:27,3:22:6.25:261,0,6	0/0:13,0:13:39.13:0,39,575	0/0:20,0:18:48.61:0,49,638	0/0:31,0:31:60.39:0,60,863	0/0:23,0:17:30.07:0,30,432	0/0:24,0:24:29.56:0,30,456	0/0:21,0:17:27.09:0,27,414	0/0:25,0:21:6.02:0,6,87	0/0:21,0:20:27.08:0,27,411	1/1:27,3:26:37.30:244,37,0	1/1:26,7:32:50.21:538,50,0	1/1:9,1:9:18.64:194,19,0
chr10	18855452	.	C	CTG	1699.04	PASS	AB=0.867;AC=16;AF=0.308;AN=52;BaseQRankSum=-5.393;DP=633;FS=0.458;HRun=0;HaplotypeScore=153.1029;InbreedingCoeff=0.2378;MQ=42.18;MQ0=57;MQRankSum=3.120;QD=5.12;ReadPosRankSum=1.928;VQSLOD=2.5411;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:25:7.16:0,7,51	0/0:19,0:15:23.74:0,24,201	./.	./.	0/0:30,0:28:16.46:0,16,106	0/1:12,16:25:28.35:28,0,86	1/1:38,0:34:15.88:188,16,0	0/1:43,0:41:99:176,0,293	0/0:15,0:13:13.93:0,14,71	0/0:20,0:16:44.50:0,44,330	0/0:21,0:21:14.70:0,15,123	0/1:21,0:19:36.19:188,0,36	0/0:18,0:17:32.05:0,32,204	0/0:15,0:15:14.50:0,14,115	0/1:8,13:23:34.83:52,0,35	0/0:23,0:23:57.30:0,57,423	0/0:33,0:25:42.85:0,43,307	0/0:13,0:12:6.33:0,6,220	0/1:24,0:20:96.59:97,0,167	1/1:36,0:36:49.23:408,49,0	1/1:22,0:15:5.02:173,5,0	1/1:27,0:26:10.50:230,10,0	0/1:17,0:14:14.68:127,0,15	0/1:13,9:18:16.92:52,0,17	0/1:29,0:28:5.52:150,0,6	0/0:28,0:24:61.42:0,61,409	0/0:24,0:22:39.16:0,39,298	0/0:13,0:9:22.11:0,22,147
chr10	18861975	.	C	CGTGTGTGTAT	7517.87	PASS	AB=0.917;AC=32;AF=0.571;AN=56;BaseQRankSum=7.602;DP=749;FS=3.794;HRun=0;HaplotypeScore=247.9564;InbreedingCoeff=0.0948;MQ=60.21;MQ0=5;MQRankSum=-4.378;QD=12.66;ReadPosRankSum=-3.044;VQSLOD=3.1759;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:41,0:39:2.67:87,3,0	0/1:8,0:9:58.85:195,0,59	0/0:24,0:20:41.94:0,42,393	0/0:25,0:21:42.01:0,42,425	0/0:16,0:21:24.41:0,24,192	1/1:38,0:38:14.85:172,15,0	1/1:22,0:21:2.78:68,3,0	1/1:34,0:33:60.15:761,60,0	1/1:5,32:40:11.15:445,11,0	0/1:25,0:25:99:603,0,126	0/1:17,0:17:19.06:19,0,183	1/1:28,0:28:8.68:93,9,0	0/1:17,0:25:99:130,0,169	0/0:24,0:27:29.63:0,30,218	1/1:35,0:35:18:262,18,0	0/1:14,0:22:99:182,0,144	0/1:24,0:26:99:427,0,216	0/1:11,0:10:76.07:76,0,82	1/1:26,0:26:54.11:624,54,0	1/1:14,0:14:2.97:20,3,0	1/1:61,0:58:99:1176,108,0	0/0:17,0:17:0.47:0,0,1	0/0:14,0:14:2.53:0,3,18	1/1:46,0:46:85.29:1021,85,0	0/0:24,0:26:0.47:0,0,1	0/1:32,0:30:99:694,0,223	0/1:27,0:27:99:360,0,151	0/1:12,0:13:99:102,0,178
chr10	18861978	.	G	GTGTGTA	7557.97	PASS	AB=0.965;AC=32;AF=0.571;AN=56;BaseQRankSum=5.146;DP=787;FS=4.374;HRun=0;HaplotypeScore=218.5559;InbreedingCoeff=0.1192;MQ=57.54;MQ0=6;MQRankSum=-3.383;QD=12.17;ReadPosRankSum=0.552;VQSLOD=3.4237;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:41,0:39:5.43:77,5,0	0/1:10,0:10:79.81:108,0,80	0/0:26,0:19:41.94:0,42,393	0/0:26,0:19:42.01:0,42,425	0/0:23,0:23:26.94:0,27,216	1/1:10,26:40:13.86:270,14,0	1/1:6,17:25:2.60:103,3,0	1/1:34,0:33:42.31:954,42,0	1/1:40,1:41:11.25:255,11,0	0/1:23,0:23:99:329,0,153	0/0:16,0:16:4.94:0,5,188	1/1:8,20:33:7.87:195,8,0	0/1:26,0:26:60.75:61,0,189	0/0:25,0:24:29.63:0,30,218	1/1:7,28:41:17.89:421,18,0	0/1:21,0:21:78.76:79,0,144	0/1:27,0:27:99:161,0,238	0/1:12,0:10:68.62:69,0,82	1/1:9,15:27:24.90:877,25,0	0/1:7,7:15:11.64:12,0,21	1/1:66,0:65:99:1581,138,0	0/0:6,11:21:0.47:0,0,1	1/1:2,11:17:2.57:10,3,0	1/1:39,5:49:83.56:1377,84,0	0/0:4,21:29:2.13:0,2,8	0/1:32,0:30:99:415,0,232	0/1:25,0:25:99:176,0,152	0/1:13,0:13:29.53:30,0,176
chr10	18861980	.	G	GTGTA	5266.89	PASS	AB=1.000;AC=30;AF=0.536;AN=56;BaseQRankSum=6.752;DP=780;FS=2.375;HRun=0;HaplotypeScore=205.5289;InbreedingCoeff=0.0493;MQ=56.50;MQ0=6;MQRankSum=-4.071;QD=8.55;ReadPosRankSum=4.352;VQSLOD=4.2085;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:40,0:38:5.05:64,5,0	0/1:10,0:10:60.91:61,0,100	0/0:26,0:18:44.87:0,45,409	0/0:27,0:19:42.01:0,42,425	0/0:23,0:23:26.93:0,27,215	1/1:39,2:41:11.76:242,12,0	1/1:24,0:23:3.01:58,3,0	0/1:36,0:35:30.52:544,0,31	0/1:41,0:41:2.42:175,0,2	0/1:22,0:22:99:173,0,153	0/0:17,0:17:11:0,11,236	1/1:29,2:31:8.08:216,8,0	0/1:24,0:24:35.43:35,0,191	0/0:21,0:20:29.63:0,30,218	1/1:36,2:39:17.88:322,18,0	0/1:20,0:20:26.09:26,0,149	0/1:29,0:29:69.66:70,0,241	0/1:13,0:11:37.20:37,0,83	1/1:26,0:26:31.32:605,31,0	0/1:13,0:13:11.37:11,0,20	1/1:66,4:67:6.76:1264,7,0	0/0:18,1:19:0.46:0,0,1	1/1:17,0:17:2.98:24,3,0	1/1:46,3:50:25.61:1011,26,0	0/0:31,0:31:5.69:0,6,50	0/1:32,0:30:99:236,0,244	0/1:25,0:25:85.99:86,0,154	0/1:13,0:13:5.26:5,0,161
chr10	18861982	.	G	GTA	2458.22	PASS	AB=0.943;AC=16;AF=0.286;AN=56;BaseQRankSum=7.534;DP=764;FS=4.357;HRun=0;HaplotypeScore=163.1731;InbreedingCoeff=0.2555;MQ=55.30;MQ0=8;MQRankSum=2.998;QD=5.90;ReadPosRankSum=5.632;VQSLOD=3.0293;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:10,29:38:3.69:33,0,4	0/0:10,0:10:10.35:0,10,110	0/0:24,0:16:44.87:0,45,409	0/0:27,0:17:42.01:0,42,425	0/0:22,0:22:26.94:0,27,216	0/1:42,0:42:53.30:93,0,53	1/1:23,0:22:2.97:40,3,0	0/1:37,0:36:99:200,0,259	0/1:39,0:39:31.07:103,0,31	0/0:23,0:23:41.11:0,41,320	0/0:17,0:17:30.51:0,31,257	1/1:27,1:28:8.59:100,9,0	0/0:25,0:25:26:0,26,241	0/0:20,0:19:29.63:0,30,218	0/1:37,0:36:1.26:177,0,1	0/0:20,0:20:24.80:0,25,184	0/0:28,0:28:42.74:0,43,330	0/0:14,0:12:16.25:0,16,154	0/1:24,0:24:50.50:281,0,51	0/1:12,0:12:14.01:34,0,14	0/1:67,2:66:39.29:833,0,39	0/0:19,0:19:2.99:0,3,24	1/1:15,1:16:3.01:58,3,0	1/1:50,0:50:16.81:673,17,0	0/0:31,0:31:5.99:0,6,49	0/0:32,0:30:60.77:0,61,488	0/0:21,0:21:39.72:0,40,274	0/0:14,0:14:23.74:0,24,232
chr10	18862146	.	T	TGTGC	4579.88	PASS	AB=0.771;AC=23;AF=0.411;AN=56;BaseQRankSum=-11.377;DP=816;FS=0.419;HRun=0;HaplotypeScore=191.0876;InbreedingCoeff=0.3023;MQ=55.84;MQ0=17;MQRankSum=4.747;QD=8.96;ReadPosRankSum=-3.518;VQSLOD=3.5489;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:55,0:55:99:158,0,435	0/0:8,0:8:15.03:0,15,164	0/0:32,0:8:14.86:0,15,113	0/0:46,0:12:17.44:0,17,140	0/0:17,0:17:20.88:0,21,170	1/1:7,10:20:6:102,6,0	0/1:6,21:29:17.09:31,0,17	1/1:42,0:41:61.49:636,61,0	0/1:24,0:24:99:148,0,112	0/0:35,0:35:65.65:0,66,671	0/0:20,0:20:17.88:0,18,154	1/1:26,1:27:8.22:105,8,0	0/0:23,0:23:33.02:0,33,339	0/0:34,0:34:68.71:0,69,613	0/1:12,21:34:74.41:382,0,74	0/1:22,0:22:67.02:81,0,67	0/0:27,0:27:21:0,21,201	0/1:17,0:17:17.36:67,0,17	1/1:7,10:16:32.41:296,32,0	1/1:16,0:16:20.99:321,21,0	1/1:15,64:80:35.37:811,35,0	0/1:7,17:25:12.31:220,0,12	0/1:4,10:14:15.81:167,0,16	1/1:26,39:68:31.50:667,31,0	0/1:7,12:20:40.63:388,0,41	0/0:29,0:29:68.96:0,69,669	0/0:18,0:18:23.66:0,24,245	0/0:15,0:15:8.70:0,9,172
chr10	18862150	.	CGTGTGTGTGTGTGT	C	7858.78	PASS	AB=0.625;AC=19;AF=0.339;AN=56;BaseQRankSum=1.738;DP=818;FS=3.446;HRun=0;HaplotypeScore=254.8068;InbreedingCoeff=0.6544;MQ=54.01;MQ0=18;MQRankSum=-6.170;QD=33.44;ReadPosRankSum=4.660;VQSLOD=3.6528;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:55:99:0,120,5737	1/1:1,7:8:12.04:476,12,0	0/0:32,0:7:3.47:0,3,26	0/0:46,0:10:6:0,6,136	1/1:5,10:15:8.98:230,9,0	0/0:23,0:22:14.08:0,14,583	0/0:27,0:27:14.55:0,15,638	0/0:39,0:38:72.18:0,72,2317	0/0:23,0:25:27.02:0,27,1272	1/1:6,27:34:61.76:1795,62,0	1/1:3,14:18:8.93:258,9,0	0/0:28,0:29:17.56:0,18,802	1/1:8,16:25:21.07:812,21,0	1/1:18,11:32:47.93:1109,48,0	0/0:36,0:36:45.15:0,45,2264	0/0:6,0:23:0.08:0,0,109	1/1:12,15:27:12.04:410,12,0	0/1:9,0:18:13.11:13,0,55	0/0:12,0:11:23.58:0,24,687	0/0:19,0:19:30.52:0,31,1309	0/0:82,0:81:62.71:0,63,3236	0/0:26,0:26:28.15:0,28,1150	0/0:17,0:17:23.58:0,24,1078	0/0:64,0:64:45.93:0,46,2174	0/0:26,0:26:38.16:0,38,1883	0/1:8,19:28:25.69:1493,0,26	1/1:1,14:15:23.86:808,24,0	0/1:6,9:15:99:455,0,138
chr10	18862152	.	T	TGC	2956.05	PASS	AB=0.896;AC=20;AF=0.357;AN=56;BaseQRankSum=-5.397;DP=821;FS=19.053;HRun=0;HaplotypeScore=184.4696;InbreedingCoeff=-0.0018;MQ=53.68;MQ0=18;MQRankSum=3.503;QD=5.65;ReadPosRankSum=2.210;VQSLOD=2.1520;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:54,0:54:99:217,0,191	0/0:8,0:8:14.90:0,15,109	0/0:33,0:9:14.86:0,15,113	0/0:46,0:11:23.44:0,23,205	0/0:16,0:16:20.84:0,21,156	0/1:21,1:21:35.85:78,0,36	0/1:26,2:28:63.49:92,0,63	0/1:13,23:35:39.84:445,0,40	0/1:27,0:27:64.61:146,0,65	0/0:34,0:34:68.53:0,69,521	0/0:17,0:17:17.81:0,18,127	0/1:9,21:30:43.58:110,0,44	0/0:25,0:25:32.79:0,33,241	0/0:34,0:34:67.03:0,67,484	0/1:35,3:38:99:232,0,172	1/1:23,0:23:23.93:145,24,0	0/0:26,0:26:20.52:0,21,148	1/1:17,0:17:16.99:102,17,0	1/1:13,0:12:26.91:185,27,0	0/1:19,2:21:91.87:233,0,92	0/1:78,2:79:99:367,0,157	0/1:25,1:26:45.32:93,0,45	0/1:21,1:22:65.91:101,0,66	1/1:55,3:56:1:332,1,0	0/1:26,2:28:71.32:255,0,71	0/0:28,0:28:70.23:0,70,541	0/0:15,0:15:15.54:0,16,151	0/0:14,0:14:4.48:0,4,107
chr10	18863781	.	C	CT	10731.24	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-15.347;DP=686;FS=3.486;HRun=8;HaplotypeScore=65.5238;InbreedingCoeff=0.9994;MQ=80.22;MQ0=0;MQRankSum=-2.301;QD=28.46;ReadPosRankSum=-0.589;VQSLOD=5.1015;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,55:61:99:1731,153,0	0/0:11,0:11:33.02:0,33,302	0/0:18,0:18:22.65:0,23,305	0/0:19,0:19:37.50:0,37,344	0/0:17,0:17:45.02:0,45,412	1/1:4,16:20:45.13:519,45,0	1/1:3,24:28:69.04:776,69,0	1/1:2,23:25:63.66:728,64,0	1/1:4,22:27:66.03:742,66,0	0/0:28,0:28:66.02:0,66,604	0/0:13,0:13:32.99:0,33,298	1/1:2,25:27:66.18:762,66,0	0/0:24,0:24:57.01:0,57,522	0/0:19,0:19:54.02:0,54,490	1/1:4,25:28:75.22:866,75,0	0/0:25,0:25:75.04:0,75,686	0/0:51,0:51:99:0,138,1258	0/0:17,0:17:51.03:0,51,467	1/1:2,19:21:57.15:647,57,0	1/1:2,21:23:63.19:727,63,0	1/1:0,24:25:66.03:742,66,0	1/1:4,24:28:63.15:712,63,0	1/1:3,14:17:36.11:416,36,0	1/1:2,25:28:78.06:880,78,0	1/1:3,15:18:42.12:485,42,0	0/0:31,0:32:59.76:0,60,721	0/0:26,0:26:66.03:0,66,604	0/0:9,0:9:27.01:0,27,247
chr10	18864424	.	GGAGAGAGAGAGA	G	2449.87	PASS	AB=0.895;AC=23;AF=0.426;AN=54;BaseQRankSum=7.584;DP=565;FS=7.682;HRun=0;HaplotypeScore=183.0117;InbreedingCoeff=0.7736;MQ=64.91;MQ0=14;MQRankSum=-6.911;QD=9.88;ReadPosRankSum=-1.015;VQSLOD=1.5652;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:51.16:0,51,2086	0/0:7,0:8:24.08:0,24,1131	./.	0/0:31,0:19:3:0,3,26	0/0:22,0:24:32.53:0,33,1147	1/1:15,8:23:6.02:207,6,0	1/1:16,3:19:8.77:285,9,0	1/1:34,0:31:1.81:25,2,0	0/0:16,0:16:39.13:0,39,2142	0/0:19,0:20:35.48:0,35,1507	0/0:17,0:17:15.05:0,15,639	1/1:5,8:13:15.05:366,15,0	0/0:11,0:11:24.08:0,24,1157	0/0:13,0:13:21.07:0,21,958	1/1:14,7:21:14.98:517,15,0	0/0:18,0:19:30.10:0,30,1428	0/0:38,0:40:84.24:0,84,4074	0/0:12,0:12:24.08:0,24,1172	0/1:15,2:16:0.96:98,0,1	1/1:14,1:17:9.03:226,9,0	1/1:24,1:24:2.96:20,3,0	1/1:16,8:23:12.92:300,13,0	1/1:13,5:19:8.99:222,9,0	1/1:9,6:14:6.02:98,6,0	1/1:14,6:20:9.03:281,9,0	0/0:17,0:17:23.44:0,23,928	0/0:14,0:14:33.11:0,33,1496	0/0:13,0:10:3.01:0,3,124
chr10	18866054	.	TGGG	T	2537.77	PASS	AB=0.902;AC=10;AF=0.179;AN=56;BaseQRankSum=3.461;DP=475;FS=15.274;HRun=13;HaplotypeScore=84.9171;InbreedingCoeff=0.6328;MQ=79.86;MQ0=3;MQRankSum=-1.051;QD=18.39;ReadPosRankSum=8.684;VQSLOD=0.0884;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,37:42:87.69:1053,88,0	0/0:4,0:4:5.98:0,6,63	0/0:21,0:15:15.30:0,15,355	0/0:27,0:23:10.50:0,10,297	0/0:19,0:19:36.11:0,36,603	0/0:9,0:12:21.22:0,21,149	0/1:19,1:22:11.28:11,0,139	0/1:11,0:12:7.90:8,0,75	1/1:5,14:20:42.94:511,43,0	0/0:12,0:15:15.24:0,15,132	0/0:4,0:4:9.03:0,9,151	0/0:18,0:20:33.80:0,34,403	0/0:12,0:15:16.07:0,16,214	0/0:14,0:16:8.99:0,9,121	0/0:9,0:13:16.10:0,16,162	1/1:7,17:24:60.07:698,60,0	0/0:22,0:28:32.74:0,33,460	1/1:10,7:18:38.88:419,39,0	0/0:12,0:13:14.97:0,15,133	0/0:2,0:2:6:0,6,67	0/0:12,0:21:8.47:0,8,53	0/0:12,0:14:15.30:0,15,146	0/0:8,0:13:1.25:0,1,3	0/0:13,0:24:35.84:0,36,260	0/0:10,0:13:7.25:0,7,70	0/0:10,0:13:14.99:0,15,175	0/0:19,0:23:33.05:0,33,451	0/0:5,0:5:9.03:0,9,143
chr10	18866065	.	GGGT	G	888.68	PASS	AB=0.904;AC=6;AF=0.107;AN=56;BaseQRankSum=9.855;DP=482;FS=52.611;HRun=0;HaplotypeScore=93.7078;InbreedingCoeff=0.6028;MQ=86.77;MQ0=3;MQRankSum=-2.935;QD=8.89;ReadPosRankSum=10.961;VQSLOD=0.0801;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:40,0:40:15.23:258,15,0	0/0:3,0:3:8.99:0,9,101	0/0:27,0:21:52.97:0,53,670	0/0:30,0:26:59.47:0,59,587	0/0:18,0:18:51.09:0,51,736	0/0:12,0:12:26.68:0,27,254	0/0:20,0:20:10.14:0,10,246	0/0:15,0:15:33.85:0,34,247	0/1:17,0:17:10.87:213,0,11	0/0:11,0:11:20.73:0,21,237	0/0:7,0:7:21.03:0,21,288	0/0:25,0:24:66.24:0,66,744	0/0:14,0:14:26.53:0,27,349	0/0:9,0:9:20.94:0,21,228	0/0:13,0:13:29.70:0,30,323	1/1:19,3:22:35.83:313,36,0	0/0:22,0:22:50.94:0,51,648	0/1:16,5:21:50.13:238,0,50	0/0:13,0:13:30.68:0,31,277	0/0:6,0:6:17.61:0,18,173	0/0:22,0:22:28.81:0,29,323	0/0:13,0:12:30.21:0,30,270	0/0:13,0:13:16.82:0,17,157	0/0:25,0:25:58.41:0,58,485	0/0:13,0:13:32.70:0,33,317	0/0:17,0:17:41.74:0,42,440	0/0:25,0:25:47.95:0,48,598	0/0:9,0:9:26.99:0,27,317
chr10	18867245	.	T	TTAA	2116.12	PASS	AB=0.626;AC=24;AF=0.429;AN=56;BaseQRankSum=10.147;DP=495;FS=0.947;HRun=0;HaplotypeScore=95.5635;InbreedingCoeff=-0.7132;MQ=64.92;MQ0=3;MQRankSum=-1.852;QD=4.64;ReadPosRankSum=2.318;VQSLOD=1.8403;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:8,0:24:2.59:134,0,3	0/0:0,0:6:5.84:0,6,55	0/1:10,0:5:11.04:11,0,27	0/0:10,0:7:5:0,5,60	0/1:12,0:26:17.24:17,0,150	0/1:4,0:22:31.52:115,0,32	0/1:8,1:18:88.39:88,0,143	0/1:17,0:37:99:346,0,258	0/1:7,0:18:44:142,0,44	0/1:6,0:21:72.67:73,0,117	0/1:2,0:14:41.51:94,0,42	0/1:7,0:16:74.37:106,0,74	0/1:10,0:19:46.02:79,0,46	0/1:3,0:19:15.19:15,0,80	0/1:7,0:19:56.20:56,0,121	0/0:3,0:9:8.91:0,9,97	0/1:5,0:27:21.85:22,0,104	0/0:1,0:14:24.35:0,24,165	0/1:3,0:15:12.24:227,0,12	0/1:4,0:18:23.85:207,0,24	0/1:8,0:18:26.35:26,0,106	0/1:6,0:12:67.46:67,0,147	0/1:11,0:26:57.67:58,0,200	0/1:1,1:13:6.86:97,0,7	0/1:9,0:14:86.03:161,0,86	0/1:8,0:12:54.75:55,0,145	0/1:3,0:26:47.65:48,0,52	0/1:3,0:12:9.17:22,0,9
chr10	18867333	.	T	TA	4079.74	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-1.877;DP=362;FS=3.897;HRun=7;HaplotypeScore=61.5742;InbreedingCoeff=0.9134;MQ=75.21;MQ0=0;MQRankSum=-0.019;QD=30.22;ReadPosRankSum=0.384;VQSLOD=4.1244;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:32.90:0,33,295	1/1:5,2:7:18.02:201,18,0	0/0:6,1:7:0.94:0,1,67	0/0:10,0:10:9.64:0,10,111	1/1:4,9:13:30.07:351,30,0	0/0:13,0:13:36.06:0,36,348	0/0:11,0:11:30.03:0,30,283	0/0:31,0:30:75.12:0,75,724	0/0:10,0:10:24.03:0,24,231	1/1:5,7:12:24.07:280,24,0	1/1:1,9:10:30.08:353,30,0	0/0:10,0:10:30.05:0,30,290	1/1:5,12:17:45.12:531,45,0	1/1:2,8:10:27.04:310,27,0	0/0:16,0:16:39.06:0,39,377	0/0:13,0:13:36.06:0,36,347	1/1:2,20:22:56.89:688,57,0	0/0:13,0:13:33.05:0,33,319	0/0:9,0:9:27.04:0,27,260	0/0:7,0:7:18.03:0,18,174	0/0:11,0:11:27.02:0,27,255	0/0:13,0:13:30.02:0,30,284	0/0:16,0:16:32.66:0,33,313	0/0:2,0:2:3:0,3,29	0/0:19,0:19:48.07:0,48,463	1/1:6,18:24:66.19:787,66,0	1/1:6,12:18:42.13:507,42,0	1/1:0,2:2:6.02:72,6,0
chr10	18867427	.	TA	T	9175.33	PASS	AC=52;AF=1.000;AN=52;DP=284;FS=0.000;HRun=1;HaplotypeScore=32.6564;InbreedingCoeff=-0.0119;MQ=44.10;MQ0=15;QD=32.31;VQSLOD=4.2279;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,12:12:33.06:437,33,0	1/1:0,3:2:3.01:42,3,0	./.	./.	1/1:0,17:15:30.10:414,30,0	1/1:0,16:16:42.14:586,42,0	1/1:1,16:16:42.14:586,42,0	1/1:0,15:15:39.13:541,39,0	1/1:0,11:10:30.10:418,30,0	1/1:2,5:6:18.06:251,18,0	1/1:0,8:7:9.03:126,9,0	1/1:1,11:10:27.09:378,27,0	1/1:0,10:10:27.09:375,27,0	1/1:1,12:12:23.98:285,24,0	1/1:1,12:12:30.10:418,30,0	1/1:0,9:9:24.08:335,24,0	1/1:1,19:18:48.16:670,48,0	1/1:0,9:9:24.08:335,24,0	1/1:4,5:6:14.72:178,15,0	1/1:0,13:12:26.99:332,27,0	1/1:2,6:7:18.06:251,18,0	1/1:0,6:6:15.01:187,15,0	1/1:0,8:8:24.04:313,24,0	1/1:2,7:7:21.07:293,21,0	1/1:0,7:7:15.05:210,15,0	1/1:2,11:11:33.11:461,33,0	1/1:0,12:12:36.12:502,36,0	1/1:0,6:6:18.06:251,18,0
chr10	18867539	.	A	AC	332.34	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-2.931;DP=453;FS=1.085;HRun=8;HaplotypeScore=49.2188;InbreedingCoeff=0.9801;MQ=58.76;MQ0=0;MQRankSum=0.654;QD=11.87;ReadPosRankSum=-2.514;VQSLOD=1.8832;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,9:16:15.04:173,15,0	0/0:9,0:9:24.01:0,24,220	0/0:11,0:10:26.98:0,27,238	0/0:16,0:15:32.32:0,32,287	0/0:16,0:16:42.02:0,42,384	0/0:9,0:9:21.01:0,21,192	0/0:21,0:21:60.03:0,60,549	0/0:22,0:22:45:0,45,411	1/1:0,12:12:24.07:277,24,0	0/0:15,0:15:23.98:0,24,219	0/0:12,0:13:26.04:0,26,226	0/0:18,0:18:48.02:0,48,439	0/0:16,0:18:49.10:0,49,422	0/0:12,0:12:24.01:0,24,220	0/0:25,0:25:75.04:0,75,686	0/0:12,0:12:33.01:0,33,302	0/0:32,0:32:90.04:0,90,823	0/0:13,0:14:35.05:0,35,308	0/0:13,0:13:30:0,30,271	0/0:19,0:20:43.06:0,43,365	0/0:17,0:17:48.02:0,48,439	0/0:8,0:8:24.01:0,24,220	0/0:15,0:15:39.02:0,39,357	0/0:32,0:32:72.03:0,72,659	0/0:18,0:18:35.97:0,36,320	0/0:13,0:13:33.01:0,33,302	0/0:18,0:18:42:0,42,384	0/0:8,0:8:21.01:0,21,192
chr10	18867719	.	CTCTCTG	C	4829.78	PASS	AB=0.800;AC=20;AF=0.357;AN=56;BaseQRankSum=-0.848;DP=767;FS=5.435;HRun=0;HaplotypeScore=172.0557;InbreedingCoeff=0.8095;MQ=49.25;MQ0=20;MQRankSum=-4.746;QD=19.55;ReadPosRankSum=-1.265;VQSLOD=4.0664;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:41:82.62:0,83,1594	1/1:0,12:12:9.03:152,9,0	0/0:14,0:7:2.98:0,3,21	0/1:19,0:7:5.85:6,0,40	1/1:1,24:23:0.47:1,0,0	0/0:32,0:32:54.13:0,54,1367	0/0:36,0:35:45:0,45,1043	0/0:44,0:31:66.20:0,66,1019	0/0:24,0:23:63.20:0,63,1647	1/1:19,5:24:60.16:1176,60,0	1/1:18,3:21:17.97:363,18,0	0/0:25,0:25:45.13:0,45,1140	1/1:3,21:23:3.01:65,3,0	0/1:4,8:12:0:0,0,0	0/0:35,0:33:75.21:0,75,1935	0/0:27,0:27:60.19:0,60,1582	1/1:29,5:31:38.55:790,39,0	0/0:32,0:31:84.17:0,84,2108	0/0:27,0:17:39.08:0,39,964	0/0:23,0:21:29.65:0,30,679	0/0:52,0:47:66.06:0,66,1480	0/0:17,0:17:36.10:0,36,910	0/0:23,0:23:24.07:0,24,620	0/0:45,0:39:63.10:0,63,1647	0/0:19,0:17:30.09:0,30,755	1/1:30,5:31:87.15:1274,87,0	1/1:10,10:19:48.04:807,48,0	1/1:5,16:19:9.03:198,9,0
chr10	18867785	.	G	GTC	114.50	PASS	AB=0.968;AC=6;AF=0.111;AN=54;BaseQRankSum=5.033;DP=759;FS=0.000;HRun=0;HaplotypeScore=110.5372;InbreedingCoeff=0.2237;MQ=44.04;MQ0=44;MQRankSum=-4.666;QD=1.16;ReadPosRankSum=0.112;VQSLOD=1.6454;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:30:32.62:0,33,351	0/0:9,0:8:2.90:0,3,39	./.	0/0:53,0:4:1.84:0,2,6	0/0:26,0:22:12.04:0,12,156	0/0:20,3:22:2.99:0,3,39	1/1:19,1:21:1.55:4,2,0	0/0:26,0:15:22.06:0,22,324	0/0:20,0:18:30.08:0,30,377	0/0:39,0:39:99:0,108,1391	0/0:14,0:13:9:0,9,117	0/1:32,1:33:0.43:0,0,89	0/0:31,0:30:24.08:0,24,308	0/0:17,0:17:3.01:0,3,39	0/0:35,1:34:18.06:0,18,234	0/0:32,0:31:63.18:0,63,801	0/0:37,0:34:72.65:0,73,902	0/0:35,0:34:88.92:0,89,1042	0/1:27,1:20:99:187,0,244	1/1:17,0:14:1.25:3,1,0	0/0:26,3:22:11.97:0,12,120	0/0:11,2:10:6.02:0,6,77	0/0:22,0:20:9.03:0,9,117	0/0:32,1:27:11.80:0,12,139	0/0:5,0:3:2.88:0,3,15	0/0:37,0:35:78.25:0,78,1018	0/0:32,0:29:58.64:0,59,799	0/0:17,0:15:18:0,18,208
chr10	18867795	.	GTCTCTCTCTGTC	G	1116.34	PASS	AB=1.000;AC=9;AF=0.188;AN=48;BaseQRankSum=3.861;DP=693;FS=2.763;HRun=0;HaplotypeScore=150.0006;InbreedingCoeff=0.4777;MQ=43.80;MQ0=39;MQRankSum=-3.121;QD=6.38;ReadPosRankSum=-1.819;VQSLOD=2.3035;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:45,0:35:30.10:30,0,86	0/0:9,0:8:2.81:0,3,90	./.	./.	0/0:20,0:18:12.04:0,12,456	0/0:7,12:18:0:0,0,0	0/0:19,0:19:0.47:0,0,1	1/1:25,0:15:18.06:225,18,0	0/1:18,0:16:3.74:59,0,4	0/0:40,0:38:87.18:0,87,2579	0/0:16,0:13:5.99:0,6,154	1/1:10,26:36:3.01:86,3,0	0/0:32,0:31:27.09:0,27,954	0/0:18,0:18:3.01:0,3,72	./.	0/0:27,0:26:48.15:0,48,1510	0/0:36,0:31:54.16:0,54,1700	0/0:36,0:34:50.06:0,50,2019	1/1:12,11:17:35.60:842,36,0	0/0:7,8:12:1.36:0,1,3	0/1:28,0:21:0:0,0,0	./.	0/0:10,11:19:2.60:0,3,10	0/0:33,0:27:0:0,0,0	0/0:7,0:5:0:0,0,0	0/0:32,0:32:75.09:0,75,2144	0/0:34,0:31:77.48:0,77,2145	0/0:13,0:12:11.91:0,12,316
chr10	18867805	.	GTC	G	743.93	PASS	AB=0.887;AC=12;AF=0.250;AN=48;BaseQRankSum=2.600;DP=650;FS=3.613;HRun=0;HaplotypeScore=91.9737;InbreedingCoeff=0.5100;MQ=42.87;MQ0=37;MQRankSum=-1.382;QD=3.54;ReadPosRankSum=-2.844;VQSLOD=1.3534;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:50,0:38:31.69:32,0,75	0/0:6,0:5:2.97:0,3,51	./.	./.	0/0:19,0:18:12.04:0,12,203	0/0:16,3:18:0:0,0,0	0/0:4,15:19:0.88:0,1,2	1/1:16,9:12:21.06:260,21,0	1/1:20,1:18:9.62:179,10,0	0/0:36,0:34:87.18:0,87,1326	0/0:12,0:9:6.02:0,6,98	1/1:34,1:35:3.01:32,3,0	0/0:32,0:31:30.01:0,30,475	0/0:20,0:20:3.01:0,3,51	./.	0/0:30,1:30:66.21:0,66,1058	0/0:37,0:32:57.12:0,57,891	0/0:29,0:27:36.04:0,36,1093	1/1:23,1:17:32.90:327,33,0	0/0:13,0:12:2.88:0,3,15	0/1:17,7:18:5.95:33,0,6	./.	0/0:19,0:17:2.60:0,3,10	1/1:23,7:25:3:25,3,0	0/0:2,4:4:0:0,0,0	0/0:32,0:30:81.11:0,81,1235	0/0:35,0:31:80.48:0,80,1249	0/0:13,0:12:12.04:0,12,181
chr10	18867811	.	C	CTG	239.41	PASS	AB=0.983;AC=8;AF=0.160;AN=50;BaseQRankSum=2.400;DP=636;FS=0.996;HRun=0;HaplotypeScore=89.5040;InbreedingCoeff=0.1126;MQ=42.16;MQ0=36;MQRankSum=-0.626;QD=1.39;ReadPosRankSum=-0.693;VQSLOD=1.7928;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:50,3:40:86.82:87,0,154	0/0:6,0:5:3.01:0,3,46	./.	./.	0/0:15,0:14:12.04:0,12,183	0/1:19,0:18:0.02:0,0,0	1/1:21,0:20:0.77:3,1,0	0/0:29,0:17:38.50:0,39,259	0/1:20,1:18:93.74:219,0,94	0/0:36,0:32:90.16:0,90,1375	0/0:12,0:9:6.02:0,6,92	0/1:35,0:35:4.48:4,0,41	0/0:35,0:34:30.02:0,30,429	0/0:19,0:19:3.01:0,3,46	0/0:27,0:25:8.98:0,9,72	0/0:32,0:30:75.19:0,75,1058	0/0:36,0:31:25.20:0,25,769	0/0:28,0:27:72.14:0,72,1061	0/0:24,0:15:20.03:0,20,183	0/1:12,0:11:0:0,0,0	0/0:28,1:22:5.92:0,6,39	./.	0/0:15,0:13:3.01:0,3,36	0/0:26,2:25:3.45:0,3,26	0/0:5,0:4:0:0,0,0	0/0:33,0:30:81.25:0,81,1236	0/0:35,0:30:79.51:0,80,1177	0/1:11,0:10:25.64:26,0,144
chr10	18867829	.	CTCTCTG	C	3621.04	PASS	AB=1.000;AC=20;AF=0.400;AN=50;BaseQRankSum=0.089;DP=665;FS=4.302;HRun=0;HaplotypeScore=100.0735;InbreedingCoeff=0.7246;MQ=41.54;MQ0=40;MQRankSum=-2.394;QD=16.61;ReadPosRankSum=5.607;VQSLOD=2.5796;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:65,0:48:39.13:0,39,931	1/1:5,1:5:2.50:9,2,0	./.	./.	1/1:11,1:11:6:82,6,0	0/0:22,0:20:15.52:0,16,430	0/0:20,0:17:11.92:0,12,294	0/0:50,0:19:39.02:0,39,575	0/0:18,0:15:30.10:0,30,871	1/1:24,5:25:7.23:916,7,0	1/1:7,1:6:3.01:50,3,0	0/0:34,0:34:9.03:0,9,231	1/1:8,24:31:9.03:164,9,0	1/1:0,22:22:3.01:35,3,0	0/0:31,0:29:18.06:0,18,460	0/0:32,0:30:60.19:0,60,1679	1/1:28,3:27:33.61:487,34,0	0/0:29,0:28:58.34:0,58,1305	0/0:34,0:23:43.71:0,44,566	0/0:16,0:14:9.03:0,9,136	0/0:35,0:25:20.81:0,21,504	0/0:16,0:14:12.04:0,12,333	./.	0/0:29,0:27:15.02:0,15,448	0/1:7,0:6:0.03:0,0,0	1/1:25,3:25:57.06:940,57,0	1/1:23,11:29:51.06:862,51,0	0/1:9,0:8:77.07:77,0,78
chr10	18867943	.	GTC	G	6413.55	PASS	AB=1.000;AC=22;AF=0.393;AN=56;BaseQRankSum=13.144;DP=790;FS=2.502;HRun=0;HaplotypeScore=119.7487;InbreedingCoeff=0.8487;MQ=48.26;MQ0=21;MQRankSum=-0.667;QD=21.89;ReadPosRankSum=3.243;VQSLOD=5.1821;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:31:53.97:0,54,926	1/1:0,6:6:15.05:199,15,0	0/1:15,0:2:7.77:8,0,46	0/0:27,0:3:3:0,3,29	1/1:3,27:30:39.12:519,39,0	0/0:24,0:22:48.10:0,48,785	0/0:23,0:23:51.12:0,51,848	0/0:49,0:19:45.15:0,45,740	0/0:33,0:30:58.27:0,58,968	1/1:2,32:32:87.27:1125,87,0	1/1:4,24:27:36.59:473,37,0	0/0:33,0:31:78.25:0,78,1318	1/1:2,32:33:60.20:791,60,0	1/1:1,15:16:27.09:359,27,0	0/0:38,0:36:85.46:0,85,1374	0/0:29,0:28:78.25:0,78,1316	1/1:12,20:29:63.14:817,63,0	0/0:23,0:24:60.09:0,60,921	0/0:21,0:14:42.14:0,42,706	0/0:38,0:37:93.13:0,93,1585	0/0:35,0:32:75.17:0,75,1282	0/0:33,0:31:54.10:0,54,925	0/0:22,0:22:51:0,51,878	0/0:29,1:27:51.17:0,51,858	0/1:16,0:16:5.94:6,0,425	1/1:1,32:31:83.66:1040,84,0	1/1:4,22:25:39.13:519,39,0	1/1:1,22:23:42.61:560,43,0
chr10	18868132	.	GTC	G	906.42	PASS	AC=4;AF=0.074;AN=54;BaseQRankSum=1.770;DP=707;FS=0.718;HRun=0;HaplotypeScore=143.4219;InbreedingCoeff=0.7544;MQ=49.67;MQ0=19;MQRankSum=0.708;QD=22.11;ReadPosRankSum=0.658;VQSLOD=4.0222;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:6:0.84:0,1,47	0/0:9,0:9:21.07:0,21,357	0/0:24,0:3:0.28:0,0,21	0/0:32,0:6:7.22:0,7,78	0/0:30,1:29:75.26:0,75,1266	0/0:25,0:25:59.99:0,60,983	0/0:23,0:22:47.93:0,48,752	0/0:49,0:40:90.28:0,90,1462	./.	0/0:27,0:25:69.23:0,69,1136	0/0:15,0:15:24.06:0,24,372	0/0:31,0:31:72.24:0,72,1161	0/0:37,0:33:63.21:0,63,1048	0/0:19,0:17:45.15:0,45,757	0/0:23,0:23:63.19:0,63,1012	1/1:5,23:26:56.97:714,57,0	0/0:19,0:18:24.03:0,24,404	1/1:4,9:11:24.96:311,25,0	0/0:18,0:14:39.13:0,39,663	0/0:40,0:37:90.29:0,90,1498	0/0:42,0:41:84.27:0,84,1390	0/0:28,0:27:66.18:0,66,1062	0/0:19,0:19:48.15:0,48,737	0/0:41,0:36:75.23:0,75,1243	0/0:27,0:27:69.23:0,69,1121	0/0:42,0:37:84.29:0,84,1415	0/0:26,0:25:54.18:0,54,901	0/0:9,0:9:15.01:0,15,199
chr10	18868174	.	GTC	G	1465.34	PASS	AB=0.705;AC=16;AF=0.308;AN=52;BaseQRankSum=6.064;DP=702;FS=1.128;HRun=0;HaplotypeScore=180.9990;InbreedingCoeff=0.4713;MQ=64.50;MQ0=18;MQRankSum=-1.113;QD=6.34;ReadPosRankSum=0.901;VQSLOD=2.8615;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:4:0.16:0,0,1	1/1:3,1:4:2.85:40,3,0	0/0:67,0:22:3.26:0,3,89	0/0:100,0:40:2.51:0,3,334	1/1:25,8:27:27.01:273,27,0	0/0:28,0:25:33.11:0,33,563	0/0:22,0:17:12.04:0,12,196	0/0:29,0:28:48.06:0,48,688	./.	0/1:25,10:28:99:319,0,118	1/1:12,8:15:17.98:177,18,0	0/0:24,0:23:39.13:0,39,669	1/1:12,19:22:15.90:163,16,0	1/1:4,9:8:8.97:80,9,0	0/0:21,0:19:5.48:0,5,150	1/1:21,1:20:5.32:54,5,0	0/1:9,6:12:16.30:141,0,16	0/0:10,0:8:3.22:0,3,13	0/0:20,0:17:44.13:0,44,649	0/0:24,0:22:41.33:0,41,622	0/0:21,0:21:27.02:0,27,421	0/0:26,0:23:24.04:0,24,383	0/0:15,0:14:21.06:0,21,331	0/0:36,0:33:39.12:0,39,640	0/0:18,0:17:27.09:0,27,467	0/1:18,15:24:57.29:269,0,57	0/1:11,14:19:7.03:118,0,7	./.
chr10	18868186	.	CA	C	7993.32	PASS	AC=48;AF=0.889;AN=54;BaseQRankSum=-8.301;DP=681;FS=0.000;HRun=1;HaplotypeScore=157.0224;InbreedingCoeff=0.7095;MQ=65.38;MQ0=18;MQRankSum=-2.132;QD=16.97;ReadPosRankSum=5.608;VQSLOD=5.0531;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,2:5:2.87:40,3,0	1/1:0,5:4:0.75:76,1,0	0/0:84,0:26:16.35:0,16,360	0/0:118,0:44:65.38:0,65,916	1/1:0,26:20:21.07:293,21,0	1/1:0,27:25:32.46:461,32,0	1/1:0,16:12:12.04:167,12,0	1/1:2,16:17:48.16:671,48,0	0/0:1,6:7:0.31:0,0,1	1/1:1,27:21:54.17:732,54,0	1/1:0,21:16:15.05:209,15,0	1/1:0,22:21:36.54:503,37,0	1/1:0,28:20:21.07:292,21,0	1/1:0,14:9:15.05:209,15,0	1/1:0,20:18:11.91:142,12,0	1/1:0,21:20:18.15:252,18,0	1/1:3,9:10:18.01:211,18,0	1/1:0,9:9:6.49:72,6,0	1/1:1,12:12:36.12:493,36,0	1/1:0,23:22:39.04:523,39,0	1/1:1,14:15:23.78:335,24,0	1/1:0,25:22:21.87:296,22,0	1/1:0,16:15:17.71:251,18,0	1/1:3,31:31:30.35:454,30,0	1/1:2,15:16:20.91:294,21,0	1/1:0,31:22:54.15:732,54,0	1/1:0,23:17:21.07:287,21,0	./.
chr10	18868203	.	GTC	G	95.32	PASS	AB=0.962;AC=8;AF=0.148;AN=54;BaseQRankSum=3.974;DP=678;FS=8.866;HRun=0;HaplotypeScore=186.8227;InbreedingCoeff=0.0010;MQ=51.69;MQ0=24;MQRankSum=-2.740;QD=0.62;ReadPosRankSum=0.248;VQSLOD=2.1900;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:10:1.36:3,1,0	0/0:7,0:6:11.60:0,12,107	0/0:57,0:17:4.11:0,4,65	0/0:85,0:28:27.44:0,27,244	0/0:28,3:25:7.65:0,8,40	0/0:30,0:27:30.10:0,30,502	0/0:16,0:12:0:0,0,0	0/0:21,0:14:30.01:0,30,334	0/0:14,0:14:0.90:0,1,7	0/1:25,3:18:85.07:85,0,241	0/0:24,1:18:5.19:0,5,34	0/0:25,0:23:34.60:0,35,420	0/0:24,0:17:3.93:0,4,55	0/1:20,0:15:30.40:30,0,218	0/1:23,0:21:10.24:10,0,172	0/0:20,0:20:26.77:0,27,295	0/1:14,0:12:17.31:17,0,125	0/0:14,0:12:14.87:0,15,171	0/0:13,0:7:20.86:0,21,317	0/0:23,0:20:16.30:0,16,303	0/0:16,0:16:12.03:0,12,198	0/0:30,0:28:8.10:0,8,119	0/0:19,0:16:15.04:0,15,228	0/0:36,0:33:21.07:0,21,349	0/0:18,0:17:15.03:0,15,220	0/1:26,1:18:2.34:2,0,276	0/1:26,3:22:60.93:61,0,128	./.
chr10	18868233	.	G	GTC	3109.34	PASS	AB=0.867;AC=24;AF=0.480;AN=50;BaseQRankSum=5.346;DP=657;FS=2.281;HRun=0;HaplotypeScore=203.5393;InbreedingCoeff=0.7660;MQ=37.22;MQ0=18;MQRankSum=0.410;QD=8.71;ReadPosRankSum=-1.518;VQSLOD=3.4156;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:13,3:16:2.70:0,3,10	0/0:8,0:7:12:0,12,127	./.	./.	0/0:33,0:28:26.47:0,26,333	1/1:14,12:23:11.99:158,12,0	1/1:14,14:26:12.93:83,13,0	0/1:38,1:24:93.47:240,0,93	0/1:15,7:22:9.50:96,0,10	0/0:31,0:22:57.15:0,57,692	0/0:25,0:19:23.35:0,23,273	1/1:11,15:24:42.05:628,42,0	0/0:28,0:22:48.02:0,48,557	0/0:27,0:24:62.64:0,63,709	1/1:10,13:21:15.05:235,15,0	0/0:17,0:16:17.99:0,18,201	0/0:21,0:17:32.22:0,32,350	0/0:19,0:17:29.95:0,30,321	1/1:10,3:10:17.78:340,18,0	1/1:13,15:23:11.63:158,12,0	1/1:8,8:16:4.28:97,4,0	1/1:20,17:34:17.74:221,18,0	1/1:14,15:26:16.30:237,16,0	1/1:21,24:41:38.45:655,38,0	1/1:10,15:23:10.62:159,11,0	0/0:37,0:31:81.24:0,81,1007	0/0:32,0:26:47.93:0,48,547	./.
chr10	18868255	.	TTCTC	T	6025.37	PASS	AB=0.987;AC=26;AF=0.481;AN=54;BaseQRankSum=5.152;DP=731;FS=10.828;HRun=0;HaplotypeScore=208.2403;InbreedingCoeff=0.7960;MQ=47.61;MQ0=12;MQRankSum=-2.278;QD=14.70;ReadPosRankSum=-4.455;VQSLOD=2.7020;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:20:0.93:4,1,0	0/0:11,0:11:29.81:0,30,504	0/0:4,0:2:6.02:0,6,115	0/0:15,0:6:1.55:0,2,85	0/0:40,0:38:26.97:0,27,1276	1/1:22,7:29:47.22:571,47,0	1/1:18,13:30:31.21:327,31,0	0/1:37,1:29:51.74:214,0,52	0/1:26,0:26:1.27:1,0,84	0/0:25,0:24:50.90:0,51,1005	0/0:28,0:23:44.30:0,44,915	1/1:13,13:28:43.30:937,43,0	0/0:31,0:28:71.98:0,72,1526	0/0:28,0:28:72.25:0,72,1712	1/1:17,8:26:41.73:595,42,0	0/0:16,0:19:23.45:0,23,227	0/0:23,0:21:48.16:0,48,1087	0/0:15,0:22:34.90:0,35,332	1/1:11,4:14:10.48:305,10,0	1/1:20,6:24:26.03:359,26,0	1/1:17,6:23:28.17:347,28,0	1/1:30,10:40:33.83:605,34,0	1/1:22,8:31:35.02:482,35,0	1/1:28,18:44:51.65:996,52,0	1/1:12,10:23:22.67:282,23,0	0/0:33,1:34:47.01:0,47,1757	0/0:25,1:31:10.09:0,10,1022	./.
chr10	18869091	.	GAGA	G	2975.73	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=10.074;DP=556;FS=5.433;HRun=0;HaplotypeScore=76.9070;InbreedingCoeff=0.9836;MQ=85.69;MQ0=0;MQRankSum=-5.477;QD=36.74;ReadPosRankSum=3.692;VQSLOD=4.3627;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,31:31:75.26:1225,75,0	0/0:12,0:12:36.12:0,36,764	0/0:16,0:16:45.15:0,45,933	0/0:21,0:21:51.17:0,51,1077	0/0:29,0:29:84.29:0,84,1783	0/0:24,0:24:66.23:0,66,1475	0/0:21,0:21:57.20:0,57,1224	0/0:30,0:30:84.29:0,84,1779	1/1:1,13:14:30.10:490,30,0	0/0:14,0:14:39.13:0,39,846	0/0:19,0:19:57.20:0,57,1266	0/0:18,0:18:48.16:0,48,1050	0/0:26,0:26:66.23:0,66,1475	0/0:17,0:17:48.14:0,48,1027	0/0:19,0:19:57.20:0,57,1251	1/1:0,19:19:51.17:833,51,0	0/0:26,0:26:75.24:0,75,1631	1/1:3,14:17:36.12:588,36,0	0/0:12,0:12:33.07:0,33,611	0/0:27,0:27:81.28:0,81,1726	0/0:21,0:21:57.19:0,57,1202	0/0:17,0:17:48.16:0,48,1071	0/0:14,0:14:36.12:0,36,796	0/0:19,0:19:51.18:0,51,1139	0/0:27,0:27:72.25:0,72,1567	0/0:14,0:14:42.14:0,42,874	0/0:29,0:29:81.28:0,81,1775	0/0:3,0:3:9.03:0,9,201
chr10	18871489	.	CTGTCTCTG	C	910.12	PASS	AB=0.960;AC=25;AF=0.500;AN=50;BaseQRankSum=2.731;DP=483;FS=7.845;HRun=0;HaplotypeScore=91.7315;InbreedingCoeff=0.0483;MQ=35.28;MQ0=53;MQRankSum=-1.442;QD=3.15;ReadPosRankSum=-1.356;VQSLOD=0.3369;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:33:6.82:0,7,40	0/0:5,0:4:3.01:0,3,74	./.	./.	1/1:9,0:7:3.46:25,3,0	0/0:24,0:22:3.88:0,4,16	1/1:26,0:20:8.07:41,8,0	0/1:31,0:24:61.39:61,0,169	0/1:22,0:22:4.73:5,0,39	0/1:21,0:17:99:240,0,113	1/1:10,0:7:3.46:25,3,0	0/0:20,0:17:2.92:0,3,18	0/1:13,0:11:42.80:43,0,103	1/1:14,0:9:3:25,3,0	0/1:21,0:19:46.52:47,0,48	1/1:15,0:15:2.60:10,3,0	1/1:11,0:7:14.76:96,15,0	0/0:8,0:8:9:0,9,83	1/1:12,0:6:2.76:57,3,0	0/0:18,0:16:11.94:0,12,91	0/1:21,0:13:7.21:7,0,73	./.	0/0:18,0:17:0:0,0,1	0/0:39,0:28:8.99:0,9,120	0/1:25,0:21:11.41:11,0,17	0/1:9,12:15:24.85:199,0,25	0/1:9,0:4:5.72:65,0,6	1/1:8,0:7:13.19:103,13,0
chr10	18871493	.	CTCTG	C	1521.75	PASS	AB=0.995;AC=29;AF=0.604;AN=48;BaseQRankSum=-1.964;DP=477;FS=4.515;HRun=0;HaplotypeScore=79.6622;InbreedingCoeff=0.2106;MQ=35.48;MQ0=53;MQRankSum=1.082;QD=4.85;ReadPosRankSum=-0.106;VQSLOD=1.4942;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:42,1:31:3.28:3,0,12	0/0:5,0:4:3.01:0,3,79	./.	./.	1/1:11,0:9:0.93:21,1,0	0/0:5,17:20:1.03:0,1,3	1/1:16,12:22:6.01:78,6,0	1/1:20,8:21:51.03:631,51,0	0/0:21,0:21:1:0,1,5	0/1:17,0:13:87.88:88,0,129	1/1:11,0:8:5.03:30,5,0	0/1:20,0:17:0:0,0,0	0/1:12,0:10:17.31:17,0,115	./.	1/1:16,6:20:12.39:107,12,0	0/0:16,0:16:1.55:0,2,4	1/1:11,0:8:7.58:33,8,0	1/1:7,0:7:5.78:31,6,0	1/1:8,4:6:15.05:271,15,0	1/1:16,1:15:6.02:97,6,0	1/1:18,1:11:9.02:124,9,0	./.	0/0:19,0:18:0:0,0,0	0/0:39,0:28:3.01:0,3,79	1/1:9,17:22:4.96:20,5,0	0/1:21,0:15:66.01:80,0,66	0/0:10,0:5:1:0,1,20	1/1:9,0:8:1.86:18,2,0
chr10	18871495	.	CTG	C	1361.30	PASS	AB=0.923;AC=31;AF=0.646;AN=48;BaseQRankSum=-2.290;DP=468;FS=27.541;HRun=0;HaplotypeScore=74.2639;InbreedingCoeff=0.2271;MQ=35.10;MQ0=54;MQRankSum=1.473;QD=4.46;ReadPosRankSum=-1.189;VQSLOD=0.7899;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,23:31:1.97:0,2,16	0/0:5,0:4:3.01:0,3,58	./.	./.	1/1:11,0:10:8.97:71,9,0	0/0:22,0:20:1.04:0,1,3	1/1:22,6:22:8.80:91,9,0	1/1:18,9:19:50.20:551,50,0	1/1:4,16:20:5.78:32,6,0	0/1:16,1:13:94.48:109,0,94	1/1:12,0:9:6.46:49,6,0	0/1:12,0:17:0:0,0,0	0/1:12,0:10:23.15:23,0,94	./.	1/1:17,4:20:7.29:70,7,0	1/1:0,16:16:3.01:45,3,0	1/1:10,0:7:11.47:64,11,0	0/0:5,1:6:4.59:0,5,16	1/1:12,0:6:17.86:133,18,0	1/1:13,4:15:5.19:20,5,0	1/1:17,1:10:8.60:74,9,0	./.	0/0:5,0:17:0:0,0,0	0/0:18,0:27:3.01:0,3,58	1/1:26,0:22:5.09:19,5,0	0/1:20,1:15:44.07:88,0,44	0/1:10,0:5:15.99:16,0,24	1/1:7,0:6:8.06:43,8,0
chr10	18871497	.	G	GAC	60.45	PASS	AB=0.988;AC=8;AF=0.160;AN=50;BaseQRankSum=0.818;DP=478;FS=0.000;HRun=0;HaplotypeScore=85.6311;InbreedingCoeff=0.3573;MQ=35.03;MQ0=53;MQRankSum=-1.986;QD=0.58;ReadPosRankSum=0.565;VQSLOD=1.5408;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,1:31:2.88:0,3,15	0/0:5,0:4:3.01:0,3,49	./.	./.	0/0:14,0:13:8.77:0,9,56	0/0:21,0:19:1.25:0,1,3	0/0:29,0:23:6.28:0,6,34	0/0:32,0:24:20.14:0,20,141	0/0:20,0:20:5.97:0,6,45	0/0:16,0:12:5.81:0,6,191	0/0:15,0:12:8.87:0,9,58	0/1:18,1:16:0:0,0,0	0/0:13,0:11:11.47:0,11,110	./.	0/0:20,0:19:14.63:0,15,106	0/0:16,0:16:2.80:0,3,13	0/0:8,1:7:10.13:0,10,62	1/1:4,2:6:6.02:121,6,0	0/0:12,0:6:7.76:0,8,60	0/0:17,0:15:5.97:0,6,44	0/1:18,0:10:9.27:9,0,34	0/1:19,0:19:0:0,0,0	0/1:17,0:16:0.01:0,0,0	0/0:40,0:29:2.89:0,3,49	1/1:26,0:22:4.22:30,4,0	0/0:21,0:16:17.73:0,18,150	0/0:10,0:4:10.77:0,11,77	0/0:7,0:6:11.93:0,12,69
chr10	18871503	.	CTG	C	1001.58	PASS	AB=0.990;AC=33;AF=0.660;AN=50;BaseQRankSum=3.132;DP=475;FS=18.259;HRun=0;HaplotypeScore=82.6029;InbreedingCoeff=0.0073;MQ=35.14;MQ0=49;MQRankSum=0.447;QD=2.76;ReadPosRankSum=1.612;VQSLOD=0.5290;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:41,1:32:2.85:0,3,25	0/0:7,0:6:3.01:0,3,55	./.	./.	1/1:13,0:12:9:87,9,0	1/1:22,0:20:2.99:24,3,0	1/1:32,0:24:9.40:72,9,0	0/1:37,0:29:65.32:177,0,65	0/1:18,0:18:5.04:5,0,24	0/1:16,0:11:55.14:131,0,55	1/1:15,0:12:6:52,6,0	0/0:18,1:16:0:0,0,0	0/1:13,0:11:28.82:29,0,51	./.	1/1:17,2:18:5.52:48,6,0	1/1:13,0:13:2.60:10,3,0	1/1:9,0:7:8.67:51,9,0	1/1:6,0:6:5.90:38,6,0	1/1:11,0:6:17.06:99,17,0	0/0:15,0:13:1.41:0,1,2	1/1:15,1:8:3.01:40,3,0	1/1:19,0:19:2.80:13,3,0	0/0:16,0:16:0:0,0,0	0/1:39,1:30:36.49:36,0,55	1/1:25,0:21:5.96:45,6,0	0/1:20,1:16:42.51:62,0,43	1/1:10,0:4:1.41:24,1,0	0/1:8,0:7:2.30:88,0,2
chr10	18871509	.	CTG	C	1615.06	PASS	AB=0.953;AC=33;AF=0.660;AN=50;BaseQRankSum=0.153;DP=468;FS=25.250;HRun=0;HaplotypeScore=87.3581;InbreedingCoeff=0.0255;MQ=35.27;MQ0=46;MQRankSum=2.663;QD=4.18;ReadPosRankSum=-0.032;VQSLOD=0.7144;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:44,0:34:10.59:61,0,11	0/0:8,1:7:2.97:0,3,20	./.	./.	1/1:14,0:13:12.47:112,12,0	1/1:22,1:21:2.17:20,2,0	1/1:26,6:24:4.75:100,5,0	0/1:23,11:26:63.96:447,0,64	0/1:16,0:16:19.17:21,0,19	0/1:15,0:11:1.47:126,0,1	1/1:14,0:11:8.99:77,9,0	0/0:19,0:16:0:0,0,0	1/1:10,0:8:0.82:49,1,0	./.	1/1:13,6:18:6.12:48,6,0	1/1:16,0:16:11.58:83,12,0	1/1:8,0:6:8.72:51,9,0	0/0:6,0:6:4.72:0,5,17	1/1:11,0:7:20.61:147,21,0	1/1:4,11:13:3.01:42,3,0	1/1:15,1:8:2.60:10,3,0	0/0:19,0:19:0.47:0,0,1	0/0:15,1:16:0:0,0,0	0/1:38,1:29:43.18:53,0,43	1/1:24,1:21:14.82:112,15,0	0/1:15,1:12:38.72:56,0,39	1/1:11,0:5:6.75:41,7,0	0/1:8,0:7:6.38:88,0,6
chr10	18871515	.	CTG	C	1468.47	PASS	AB=0.990;AC=40;AF=0.800;AN=50;BaseQRankSum=-0.376;DP=475;FS=24.796;HRun=0;HaplotypeScore=87.9900;InbreedingCoeff=-0.1833;MQ=36.62;MQ0=44;MQRankSum=3.160;QD=3.29;ReadPosRankSum=-1.413;VQSLOD=0.5231;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:50,0:41:39.46:75,0,39	0/1:12,0:10:9.93:42,0,10	./.	./.	1/1:15,0:14:15.88:138,16,0	1/1:23,0:21:8.03:69,8,0	1/1:29,0:21:5.37:74,5,0	0/1:32,0:26:73.93:74,0,101	0/1:16,1:17:26.74:36,0,27	1/1:16,0:12:1.65:168,2,0	1/1:17,0:13:11.99:101,12,0	1/1:18,1:16:3.33:25,3,0	0/1:9,0:7:2.73:31,0,3	./.	1/1:18,2:19:6.07:47,6,0	1/1:15,0:15:11.82:87,12,0	1/1:11,0:9:11.79:77,12,0	1/1:6,0:6:5.91:37,6,0	1/1:9,0:6:11.44:112,11,0	1/1:14,0:12:3.48:44,3,0	1/1:16,0:8:2.68:11,3,0	1/1:18,0:18:2.60:10,3,0	0/0:16,0:16:0:0,0,0	0/1:41,1:32:12.81:40,0,13	1/1:24,0:20:12.42:97,12,0	0/1:14,0:10:7.36:56,0,7	1/1:11,0:5:9.58:45,10,0	0/1:8,0:7:3.57:92,0,4
chr10	18871677	.	TG	T	399.18	PASS	AB=0.659;AC=2;AF=0.036;AN=56;BaseQRankSum=5.680;DP=395;FS=3.475;HRun=4;HaplotypeScore=63.0991;InbreedingCoeff=0.0166;MQ=58.87;MQ0=2;MQRankSum=-2.610;QD=17.36;ReadPosRankSum=2.561;VQSLOD=3.1288;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:51.16:0,51,697	0/0:7,0:7:21.07:0,21,294	0/0:11,0:4:8.99:0,9,95	0/0:8,0:8:11.84:0,12,162	0/0:7,0:7:15.05:0,15,209	0/0:8,0:8:18.01:0,18,214	0/0:34,0:34:87.27:0,87,1191	0/0:13,0:13:33.11:0,33,458	0/0:15,0:15:36.11:0,36,489	0/0:13,0:13:37.35:0,37,475	0/0:4,0:4:12.03:0,12,151	0/0:16,0:16:39.10:0,39,498	0/0:15,0:15:40.38:0,40,545	0/0:20,0:19:54.14:0,54,689	0/0:9,0:9:24.08:0,24,336	0/1:2,3:5:10.30:104,0,10	0/0:28,0:28:68.97:0,69,943	0/1:10,8:18:42.66:383,0,43	0/0:9,0:8:24.08:0,24,336	0/0:6,0:6:15.05:0,15,210	0/0:46,0:46:99:0,129,1761	0/0:9,0:9:21.05:0,21,294	0/0:4,0:4:9.02:0,9,110	0/0:41,0:40:99:0,111,1537	0/0:7,0:7:15.04:0,15,193	0/0:7,0:7:12.04:0,12,167	0/0:7,0:7:15.05:0,15,210	0/0:6,0:6:15.05:0,15,198
chr10	18871693	.	TG	T	782.94	PASS	AB=0.784;AC=12;AF=0.214;AN=56;BaseQRankSum=5.872;DP=388;FS=14.303;HRun=5;HaplotypeScore=49.7422;InbreedingCoeff=-0.0770;MQ=60.32;MQ0=2;MQRankSum=-1.421;QD=5.98;ReadPosRankSum=0.396;VQSLOD=-0.4556;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:57.17:0,57,760	0/1:5,3:8:77.97:78,0,181	0/0:8,0:4:8.98:0,9,101	0/1:6,0:6:5.01:5,0,39	0/0:5,0:5:15.04:0,15,189	0/0:10,0:10:21.07:0,21,287	0/0:27,0:27:75.21:0,75,1026	0/0:11,0:11:26.58:0,27,355	0/0:11,0:11:33.10:0,33,436	0/1:11,2:13:31.95:32,0,348	0/0:2,0:2:6.02:0,6,82	0/0:17,0:17:45.13:0,45,584	0/1:12,2:14:3.85:4,0,331	0/1:13,4:17:22.85:23,0,472	0/0:8,0:8:21.06:0,21,271	1/1:0,4:4:9.03:102,9,0	0/1:17,11:28:99:146,0,462	0/1:8,15:23:99:379,0,203	0/0:12,0:12:36.09:0,36,472	0/0:5,0:5:9.03:0,9,123	0/0:55,1:56:99:0,162,2085	0/0:11,0:11:27.07:0,27,369	0/0:6,0:6:18.06:0,18,246	0/0:40,0:39:99:0,105,1405	0/0:7,0:7:21.07:0,21,287	0/1:7,1:8:18.94:19,0,135	0/1:1,5:6:25.90:119,0,26	0/1:3,1:4:25.10:25,0,73
chr10	18871710	.	T	TG	153.62	PASS	AB=0.860;AC=5;AF=0.089;AN=56;BaseQRankSum=5.664;DP=385;FS=1.055;HRun=3;HaplotypeScore=48.9710;InbreedingCoeff=-0.1144;MQ=78.42;MQ0=0;MQRankSum=-2.999;QD=2.84;ReadPosRankSum=-0.253;VQSLOD=-0.5320;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:51.11:0,51,586	0/1:8,1:9:20.83:21,0,194	0/0:11,0:11:26.87:0,27,276	0/1:10,0:10:14.64:15,0,227	0/0:4,0:4:12.04:0,12,144	0/0:12,0:12:30.09:0,30,359	0/0:29,0:29:78.24:0,78,934	0/0:12,0:12:30.09:0,30,360	0/0:11,0:11:33.10:0,33,396	0/0:9,0:9:21.06:0,21,248	0/0:2,0:2:6.02:0,6,72	0/0:15,0:15:33.10:0,33,396	0/0:13,1:14:32.56:0,33,389	0/0:17,0:17:22.34:0,22,511	0/0:10,0:10:30.09:0,30,357	0/0:5,0:5:12.04:0,12,144	0/1:19,5:24:99:123,0,577	0/0:23,0:23:65.69:0,66,763	0/0:8,0:8:21.06:0,21,250	0/0:5,0:5:3.01:0,3,36	0/0:60,1:61:99:0,165,1966	0/0:10,0:10:21.06:0,21,251	0/0:5,0:5:12.04:0,12,143	0/0:34,0:33:96.25:0,96,1135	0/0:5,0:5:15.05:0,15,179	0/0:9,0:9:18.05:0,18,215	0/1:5,1:6:39.07:39,0,93	0/1:3,2:5:59.93:72,0,60
chr10	18872889	.	G	GA	1240.27	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-7.990;DP=666;FS=9.123;HRun=9;HaplotypeScore=64.2733;InbreedingCoeff=0.8867;MQ=77.18;MQ0=0;MQRankSum=-0.599;QD=21.02;ReadPosRankSum=3.078;VQSLOD=4.3334;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,30:35:81.69:897,82,0	0/0:15,0:15:44.99:0,45,391	0/0:19,0:19:9.45:0,9,215	0/0:14,0:14:2.47:0,2,170	0/0:23,0:24:59.02:0,59,501	0/0:30,0:30:77.92:0,78,664	0/0:20,0:20:53.94:0,54,460	0/0:35,0:35:84.77:0,85,750	1/1:2,22:24:42.11:465,42,0	0/0:26,0:26:74.97:0,75,649	0/0:21,0:21:47.70:0,48,416	0/0:20,0:20:50.97:0,51,443	0/0:29,0:29:65.97:0,66,573	0/0:22,0:22:59.96:0,60,516	0/0:27,0:27:74.97:0,75,651	0/0:24,0:24:59.97:0,60,521	0/0:28,0:28:74.98:0,75,651	0/0:21,0:21:53.99:0,54,469	0/0:25,0:25:62.95:0,63,541	0/0:18,0:18:44.85:0,45,373	0/0:9,0:9:26.99:0,27,234	0/0:25,0:25:62.97:0,63,543	0/0:23,0:23:59.97:0,60,517	0/0:30,0:30:86.94:0,87,746	0/0:24,0:24:53.96:0,54,469	0/0:22,0:22:59.99:0,60,521	0/0:30,0:29:71.93:0,72,614	0/0:25,1:26:41.81:0,42,592
chr10	18874758	.	ACACAGG	A	1827.40	PASS	AC=24;AF=0.462;AN=52;BaseQRankSum=1.027;DP=697;FS=1.663;HRun=0;HaplotypeScore=149.9249;InbreedingCoeff=0.8180;MQ=68.88;MQ0=12;MQRankSum=2.991;QD=7.00;ReadPosRankSum=4.150;VQSLOD=2.7012;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:32,0:32:23.95:193,24,0	1/1:5,0:5:2.50:24,2,0	./.	./.	1/1:15,2:17:1.27:21,1,0	0/0:24,0:22:16.06:0,16,101	0/0:53,0:52:50.86:0,51,411	0/0:24,0:23:2.98:0,3,21	1/1:20,0:19:31.04:235,31,0	1/1:17,9:26:23.31:201,23,0	1/1:12,0:11:14.98:124,15,0	0/0:32,0:31:38.73:0,39,298	1/1:25,0:24:38.79:301,39,0	1/1:29,0:28:26.96:222,27,0	0/0:25,0:25:31.01:0,31,227	0/0:24,0:23:19.59:0,20,285	1/1:43,0:43:26.64:364,27,0	0/0:44,0:44:56.41:0,56,447	0/0:20,0:19:9.01:0,9,82	0/0:4,0:4:3:0,3,25	0/0:54,0:50:23.82:0,24,426	0/0:11,0:10:3:0,3,25	0/0:13,0:12:8.89:0,9,65	0/0:42,0:39:47.77:0,48,390	0/0:10,0:8:14.99:0,15,126	1/1:30,0:30:20.98:176,21,0	1/1:18,0:17:17.59:123,18,0	1/1:4,0:4:5.94:42,6,0
chr10	18874914	.	GCACAGA	G	1158.92	PASS	AB=1.000;AC=19;AF=0.432;AN=44;BaseQRankSum=1.343;DP=684;FS=4.054;HRun=0;HaplotypeScore=148.0287;InbreedingCoeff=0.4966;MQ=53.76;MQ0=51;MQRankSum=-0.427;QD=3.92;ReadPosRankSum=0.199;VQSLOD=2.5948;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:26:2.99:0,3,24	0/0:7,0:6:5.44:0,5,45	./.	./.	0/0:9,0:9:11.98:0,12,98	1/1:11,0:11:3.01:49,3,0	1/1:44,0:38:8.97:93,9,0	1/1:18,3:19:5.91:38,6,0	0/0:31,0:25:6.39:0,6,43	0/0:24,0:21:11.98:0,12,105	0/1:7,0:7:4.57:5,0,19	1/1:29,0:22:35.41:440,35,0	0/0:40,0:38:8.69:0,9,68	0/1:38,0:36:2.85:3,0,30	1/1:23,0:21:14.80:175,15,0	0/0:30,0:22:21.07:0,21,320	0/0:39,0:30:2.96:0,3,26	0/0:31,0:28:33.11:0,33,524	./.	1/1:10,0:9:6.02:99,6,0	0/1:78,0:60:12.84:237,0,13	./.	1/1:6,0:6:3.01:37,3,0	1/1:29,0:21:11.90:138,12,0	./.	0/0:12,0:10:9.41:0,9,70	0/0:13,0:11:1.93:0,2,23	./.
chr10	18875066	.	TAGGGAGGG	T	11568.32	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-3.965;DP=515;FS=1.842;HRun=0;HaplotypeScore=143.6297;InbreedingCoeff=0.5236;MQ=58.71;MQ0=2;MQRankSum=-2.451;QD=24.51;ReadPosRankSum=3.644;VQSLOD=4.6873;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,17:26:11.95:292,12,0	1/1:2,5:7:11.64:253,12,0	0/0:22,0:16:8.76:0,9,109	0/0:20,0:13:5.68:0,6,38	1/1:3,9:12:6.02:120,6,0	1/1:3,8:11:9.03:234,9,0	1/1:11,15:26:27.09:686,27,0	1/1:10,12:22:36.11:683,36,0	1/1:4,12:16:6.02:156,6,0	1/1:4,19:23:54.17:1200,54,0	1/1:2,7:9:8.99:159,9,0	1/1:10,20:26:15.04:318,15,0	1/1:17,9:26:51.14:1115,51,0	1/1:14,17:31:30.10:757,30,0	1/1:9,15:23:21.07:545,21,0	1/1:8,17:24:42.14:1027,42,0	1/1:6,9:15:9.03:234,9,0	1/1:6,0:6:3.01:70,3,0	1/1:7,11:18:32.92:554,33,0	1/1:3,6:9:9:146,9,0	1/1:38,3:41:36.42:738,36,0	1/1:3,9:12:11.79:252,12,0	1/1:2,10:12:12.03:280,12,0	1/1:8,7:13:3.01:46,3,0	1/1:3,12:15:21.03:462,21,0	1/1:12,8:19:30.10:734,30,0	1/1:4,14:17:18.31:431,18,0	1/1:1,2:3:3.01:78,3,0
chr10	18875072	.	G	GA	1402.98	PASS	AB=0.954;AC=14;AF=0.250;AN=56;BaseQRankSum=0.905;DP=477;FS=4.350;HRun=1;HaplotypeScore=127.6420;InbreedingCoeff=-0.3608;MQ=57.25;MQ0=2;MQRankSum=0.107;QD=5.87;ReadPosRankSum=-3.037;VQSLOD=-0.5858;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:24:34.01:34,0,155	0/0:6,0:6:14.06:0,14,118	0/0:20,0:13:22.89:0,23,287	0/0:20,0:12:30:0,30,356	0/1:11,0:11:71.35:74,0,71	0/0:11,0:11:13.88:0,14,115	0/0:24,0:24:7.53:0,8,419	0/1:22,0:22:99:238,0,447	0/0:14,0:14:11.27:0,11,107	0/1:21,0:21:99:110,0,241	0/1:9,0:9:30.32:30,0,122	0/0:28,0:24:41.10:0,41,458	0/1:18,5:23:99:190,0,304	0/0:29,0:29:59.66:0,60,539	0/0:21,0:20:29.74:0,30,239	0/1:21,0:20:31.49:31,0,237	0/0:14,1:15:22.87:0,23,221	0/1:3,1:4:35.93:36,0,71	0/1:15,0:15:99:140,0,230	0/1:8,0:8:74.09:74,0,111	0/1:27,15:42:99:458,0,463	0/0:12,0:12:16.87:0,17,141	0/1:11,0:11:23.75:91,0,24	0/1:13,0:11:34.44:34,0,92	0/1:15,0:15:15.89:16,0,190	0/0:17,1:17:3.14:0,3,365	0/0:16,0:15:15.80:0,16,113	0/0:3,0:3:5.69:0,6,53
chr10	18875832	.	AAC	A	8656.20	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-9.173;DP=836;FS=1.324;HRun=0;HaplotypeScore=138.4751;InbreedingCoeff=0.9815;MQ=71.47;MQ0=3;MQRankSum=-0.928;QD=24.95;ReadPosRankSum=0.997;VQSLOD=5.8695;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,42:55:83.13:1307,83,0	1/1:0,10:12:32.76:353,33,0	0/0:48,0:36:57.23:0,57,781	0/0:28,0:24:12.75:0,13,275	1/1:3,22:25:62.69:723,63,0	0/0:11,0:25:45.01:0,45,435	0/0:14,1:45:57.02:0,57,813	0/0:12,0:29:57:0,57,553	1/1:9,25:35:69.04:805,69,0	1/1:8,29:37:90.11:1028,90,0	1/1:3,16:19:48.11:559,48,0	0/0:13,0:46:99:0,111,1036	1/1:7,18:25:47.92:575,48,0	1/1:5,11:16:24.07:280,24,0	0/0:6,0:19:36.01:0,36,357	0/0:29,2:31:6.28:0,6,1053	1/1:15,33:51:60.99:1033,61,0	0/0:22,0:22:63.21:0,63,978	0/0:14,0:30:60.07:0,60,647	0/0:4,0:26:66.02:0,66,631	0/0:13,0:40:72.03:0,72,716	0/0:6,0:15:21.01:0,21,194	0/0:6,0:22:39:0,39,349	0/0:9,0:41:90.01:0,90,836	0/0:7,0:21:51.02:0,51,508	1/1:3,30:33:90.26:1066,90,0	1/1:3,17:21:44.97:517,45,0	1/1:6,11:18:35.94:410,36,0
chr10	18876588	.	TG	T	672.47	PASS	AB=0.917;AC=12;AF=0.261;AN=46;BaseQRankSum=0.636;DP=169;FS=0.000;HRun=9;HaplotypeScore=20.0215;InbreedingCoeff=0.5470;MQ=91.09;MQ0=0;MQRankSum=0.190;QD=12.93;ReadPosRankSum=3.155;VQSLOD=1.4424;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,11:12:21.01:192,21,0	0/0:4,0:4:3.01:0,3,35	0/0:19,1:10:6.85:0,7,67	0/0:18,0:15:24.68:0,25,249	0/0:6,0:6:15.01:0,15,151	./.	0/0:5,0:5:0:0,0,0	./.	1/1:1,9:10:24.01:220,24,0	0/0:4,0:4:9.03:0,9,104	0/0:8,0:8:24.07:0,24,276	0/0:4,0:4:2.98:0,3,21	./.	0/0:8,0:8:24.07:0,24,277	0/0:3,0:3:2.50:0,2,9	1/1:0,9:9:21.01:192,21,0	0/0:10,0:10:27.08:0,27,311	1/1:3,9:12:21.01:192,21,0	0/0:3,0:3:2.03:0,2,5	./.	0/0:3,0:3:2.99:0,3,24	./.	1/1:2,0:2:1.25:3,1,0	0/0:6,0:6:4.81:0,5,29	0/1:2,0:2:0:0,0,0	0/1:4,1:5:15.43:15,0,92	0/0:4,0:4:12.03:0,12,138	0/0:1,0:1:2.99:0,3,23
chr10	18877785	.	A	ATTT	3675.63	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=12.975;DP=419;FS=7.242;HRun=7;HaplotypeScore=78.0922;InbreedingCoeff=0.9383;MQ=86.08;MQ0=1;MQRankSum=1.593;QD=23.12;ReadPosRankSum=2.159;VQSLOD=0.5356;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,1:25:45.15:715,45,0	1/1:0,0:3:8.96:68,9,0	0/0:26,0:23:16.24:0,16,307	0/0:12,0:11:3.49:0,3,133	1/1:3,0:13:29.56:216,30,0	0/0:11,0:11:30.10:0,30,408	0/0:16,0:16:42.14:0,42,572	0/0:24,0:24:60.18:0,60,801	1/1:0,0:19:51.17:819,51,0	1/1:1,0:10:26.91:209,27,0	1/1:2,0:7:14.92:112,15,0	0/0:9,0:9:21.06:0,21,287	1/1:1,0:10:23.91:184,24,0	1/1:1,0:9:20.51:154,21,0	0/0:8,0:8:24.08:0,24,327	0/0:11,0:11:30.08:0,30,393	1/1:1,0:31:80.69:620,81,0	0/0:25,0:25:75.25:0,75,1023	0/0:18,0:18:44.92:0,45,584	0/0:13,0:13:39.13:0,39,532	0/0:24,0:24:69.23:0,69,935	0/0:17,0:17:39.11:0,39,532	0/0:16,0:16:45.13:0,45,595	0/0:22,0:22:57.15:0,57,744	0/0:8,0:8:24.04:0,24,292	1/1:2,0:15:38.87:303,39,0	1/1:2,0:15:32.87:253,33,0	1/1:0,0:1:2.99:23,3,0
chr10	18879421	.	TTTG	T	7729.48	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=13.592;DP=524;FS=11.249;HRun=0;HaplotypeScore=78.2796;InbreedingCoeff=0.9948;MQ=89.53;MQ0=0;MQRankSum=-3.658;QD=46.28;ReadPosRankSum=4.601;VQSLOD=6.5208;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,111,2624	1/1:0,9:9:24.04:390,24,0	0/0:16,0:16:48.06:0,48,1012	0/0:26,0:26:74.14:0,74,1579	1/1:1,12:13:36.12:635,36,0	0/0:10,0:10:30.10:0,30,709	0/0:23,0:23:69.24:0,69,1626	0/0:25,0:25:75.26:0,75,1771	0/0:16,0:16:45.14:0,45,989	1/1:2,25:27:75.26:1321,75,0	1/1:0,6:6:15.01:232,15,0	0/0:27,0:27:81.23:0,81,1836	1/1:0,23:23:69.24:1215,69,0	1/1:2,16:18:39.13:686,39,0	0/0:14,0:14:42.14:0,42,988	0/0:15,0:15:45.15:0,45,1034	1/1:0,22:22:63.22:1112,63,0	0/0:15,0:15:42.14:0,42,993	0/0:18,0:18:54.19:0,54,1277	0/0:17,0:17:51.16:0,51,1093	0/0:35,0:35:99:0,105,2420	0/0:14,0:14:42.14:0,42,989	0/0:13,0:13:39.13:0,39,922	0/0:14,0:14:42.14:0,42,987	0/0:21,0:21:63.22:0,63,1488	1/1:1,25:26:75.24:1293,75,0	1/1:0,16:16:33.11:582,33,0	1/1:0,7:7:15.05:265,15,0
chr10	18880216	.	C	CA	12931.22	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-16.781;DP=673;FS=12.067;HRun=0;HaplotypeScore=63.6332;InbreedingCoeff=0.9998;MQ=91.94;MQ0=0;MQRankSum=-3.030;QD=43.39;ReadPosRankSum=5.846;VQSLOD=4.1241;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,36:36:99:1630,102,0	1/1:1,10:11:30.10:480,30,0	0/0:24,0:23:66.22:0,66,919	0/0:37,0:35:95.59:0,96,1186	1/1:1,28:29:78.27:1247,78,0	0/0:26,0:25:78.26:0,78,1088	0/0:21,0:21:63.10:0,63,834	0/0:20,0:20:57.19:0,57,795	1/1:0,32:32:87.30:1381,87,0	1/1:1,29:30:87.30:1383,87,0	1/1:0,23:23:66.23:1055,66,0	0/0:30,0:30:87.29:0,87,1210	1/1:0,23:23:63.20:1007,63,0	1/1:0,23:23:63.21:1007,63,0	0/0:29,0:29:87.29:0,87,1213	0/0:31,1:32:45.30:0,45,1186	1/1:1,27:28:75.26:1199,75,0	0/0:30,0:30:81.27:0,81,1128	0/0:12,0:12:33.09:0,33,427	0/0:22,0:22:66.22:0,66,921	0/0:17,0:17:45.15:0,45,627	0/0:18,0:18:54.18:0,54,741	0/0:19,0:19:54.18:0,54,744	0/0:24,0:24:69.23:0,69,964	0/0:14,0:14:39.11:0,39,526	1/1:0,27:27:81.25:1248,81,0	1/1:1,21:22:48.16:767,48,0	1/1:0,14:14:33.11:527,33,0
chr10	18880715	.	C	CA	11267.82	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-13.947;DP=674;FS=1.650;HRun=1;HaplotypeScore=65.9874;InbreedingCoeff=0.9972;MQ=87.99;MQ0=0;MQRankSum=-7.107;QD=39.12;ReadPosRankSum=4.122;VQSLOD=5.5028;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,49:50:99:1974,132,0	1/1:1,6:7:15.05:225,15,0	0/0:23,0:23:56.18:0,56,684	0/0:23,0:23:55.03:0,55,739	1/1:1,17:18:48.12:693,48,0	0/0:22,0:22:63.20:0,63,815	0/0:24,0:24:72.20:0,72,905	0/0:23,0:23:63.20:0,63,806	1/1:1,18:19:48.16:718,48,0	1/1:1,21:22:60.18:876,60,0	1/1:2,20:23:53.84:788,54,0	0/0:28,0:28:78.25:0,78,1012	1/1:0,32:32:90.30:1349,90,0	1/1:1,22:23:57.19:853,57,0	0/0:30,0:30:90.27:0,90,1151	0/0:20,0:20:57.18:0,57,727	1/1:0,32:32:81.27:1214,81,0	0/0:22,0:22:66.21:0,66,855	0/0:22,0:22:63.16:0,63,775	0/0:18,0:18:51.14:0,51,634	0/0:41,0:41:99:0,123,1533	0/0:15,0:15:45.13:0,45,570	0/0:14,0:14:42.10:0,42,503	0/0:40,0:40:99:0,117,1487	0/0:21,0:21:60.18:0,60,765	1/1:0,20:20:57.17:825,57,0	1/1:1,32:33:96.33:1439,96,0	1/1:0,9:9:21.07:315,21,0
chr10	18881574	.	A	AG	10913.20	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-10.038;DP=607;FS=2.598;HRun=0;HaplotypeScore=58.8519;InbreedingCoeff=0.9997;MQ=90.21;MQ0=0;MQRankSum=-5.146;QD=42.30;ReadPosRankSum=2.850;VQSLOD=5.5871;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,27:27:72.25:1148,72,0	1/1:0,9:9:27.09:431,27,0	0/0:27,0:27:78.23:0,78,1041	0/0:25,0:25:72.18:0,72,936	1/1:1,20:22:60.20:928,60,0	0/0:16,0:16:48.16:0,48,671	0/0:22,0:22:66.20:0,66,904	0/0:40,0:40:99:0,120,1601	1/1:0,23:23:60.20:956,60,0	1/1:0,22:22:66.22:1046,66,0	1/1:0,18:18:48.08:736,48,0	0/0:21,0:21:63.20:0,63,864	1/1:0,18:18:54.18:862,54,0	1/1:4,26:30:75.26:1197,75,0	0/0:28,0:28:84.26:0,84,1155	0/0:22,0:22:63.21:0,63,881	1/1:1,20:21:48.16:766,48,0	0/0:16,0:16:45.11:0,45,603	0/0:16,0:16:45.05:0,45,586	0/0:21,0:21:54.16:0,54,734	0/0:25,0:25:75.22:0,75,1028	0/0:14,0:14:42.11:0,42,551	0/0:12,0:12:33.07:0,33,428	0/0:30,0:30:87.29:0,87,1213	0/0:14,0:14:39.12:0,39,517	1/1:2,25:27:69.22:1072,69,0	1/1:1,31:32:84.29:1339,84,0	1/1:0,9:9:27.09:431,27,0
chr10	18881690	.	AAGTTTAT	A	11575.92	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=16.552;DP=607;FS=1.998;HRun=0;HaplotypeScore=146.5519;InbreedingCoeff=0.9954;MQ=73.32;MQ0=0;MQRankSum=-16.511;QD=50.77;ReadPosRankSum=4.673;VQSLOD=4.6655;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,12:19:26.92:506,27,0	1/1:1,13:14:36.12:888,36,0	0/0:23,0:23:60.19:0,60,1974	0/0:19,0:19:43.81:0,44,1454	1/1:3,16:19:45:899,45,0	0/0:36,0:36:99:0,99,3611	0/0:20,0:20:57.20:0,57,2143	0/0:37,0:37:93.29:0,93,3264	1/1:4,19:23:51.13:1209,51,0	1/1:1,22:23:66.23:1582,66,0	1/1:5,26:31:66.10:1471,66,0	0/0:18,0:18:48.16:0,48,1825	1/1:0,16:16:45.15:1114,45,0	1/1:4,17:21:33.11:816,33,0	0/0:18,0:18:51.16:0,51,1808	0/0:21,0:21:63.22:0,63,2402	1/1:6,15:21:33.07:763,33,0	0/0:36,0:36:84.29:0,84,3134	0/0:23,0:23:57.19:0,57,2023	0/0:23,0:23:66.20:0,66,2326	0/0:14,0:14:39.13:0,39,1484	0/0:23,0:23:45.15:0,45,1692	0/0:23,0:23:63.20:0,63,2236	0/0:17,0:17:48.15:0,48,1764	0/0:28,0:28:78.25:0,78,2930	1/1:0,11:11:30.09:693,30,0	1/1:4,20:24:54.19:1338,54,0	1/1:0,6:6:12.04:297,12,0
chr10	18883112	.	TCTTC	T	11063.29	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=18.029;DP=729;FS=5.208;HRun=0;HaplotypeScore=146.1648;InbreedingCoeff=0.9987;MQ=84.39;MQ0=1;MQRankSum=-7.411;QD=48.52;ReadPosRankSum=3.627;VQSLOD=5.4339;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,126,3360	1/1:0,8:8:18.06:359,18,0	0/0:22,0:22:57.18:0,57,1352	0/0:27,0:27:72.25:0,72,1890	1/1:1,21:22:45.15:898,45,0	0/0:29,0:29:87.30:0,87,2407	0/0:34,0:34:99:0,102,2718	0/0:31,0:31:84.29:0,84,2302	0/0:21,0:21:60.21:0,60,1671	1/1:1,23:24:63.20:1203,63,0	1/1:1,18:19:45.15:898,45,0	0/0:25,0:25:75.23:0,75,1934	1/1:1,36:37:99:1976,99,0	1/1:0,26:26:69.24:1376,69,0	0/0:41,0:41:99:0,123,3338	0/0:29,0:29:87.30:0,87,2391	1/1:0,29:29:63.22:1258,63,0	0/0:21,0:21:63.19:0,63,1698	0/0:15,0:15:42.14:0,42,1088	0/0:22,0:22:66.17:0,66,1655	0/0:24,0:24:66.22:0,66,1788	0/0:30,0:30:90.30:0,90,2439	0/0:22,0:22:66.12:0,66,1767	0/0:31,0:30:84.29:0,84,2325	0/0:34,0:34:99:0,102,2731	1/1:1,24:26:69.22:1300,69,0	1/1:1,25:26:60.21:1198,60,0	1/1:0,10:10:30.10:599,30,0
chr10	18883384	.	G	GGA	12481.45	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-13.443;DP=732;FS=4.229;HRun=0;HaplotypeScore=124.0103;InbreedingCoeff=0.9993;MQ=82.47;MQ0=0;MQRankSum=-4.485;QD=41.88;ReadPosRankSum=2.282;VQSLOD=5.9482;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:33:53.99:506,54,0	1/1:0,7:7:21.07:397,21,0	0/0:25,0:26:31.75:0,32,734	0/0:27,0:26:62.61:0,63,796	1/1:3,33:37:87.03:1478,87,0	0/0:32,0:32:90.25:0,90,1255	0/0:20,0:20:51.15:0,51,725	0/0:29,0:29:81.23:0,81,1116	1/1:4,0:18:51:546,51,0	1/1:1,23:24:69.24:1263,69,0	1/1:0,15:15:39.13:721,39,0	0/0:30,0:30:87.24:0,87,1189	1/1:0,27:28:69.24:1302,69,0	1/1:0,26:28:63.22:1187,63,0	0/0:31,0:31:93.26:0,93,1292	0/0:26,0:26:78.22:0,78,1078	1/1:0,16:18:30.10:567,30,0	0/0:18,0:18:54.16:0,54,767	0/0:23,0:23:68.94:0,69,919	0/0:37,0:37:99:0,108,1557	0/0:39,0:39:99:0,114,1642	0/0:29,0:29:87.28:0,87,1238	0/0:26,0:26:78.25:0,78,1099	0/0:26,0:26:75.17:0,75,1031	0/0:14,0:14:42.12:0,42,576	1/1:0,42:42:99:2184,123,0	1/1:0,22:26:66.22:1197,66,0	1/1:0,22:22:60.21:1135,60,0
chr10	18883415	.	CTTA	C	1686.09	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.602;DP=720;FS=0.000;HRun=0;HaplotypeScore=156.9049;InbreedingCoeff=0.9984;MQ=88.47;MQ0=0;MQRankSum=-6.947;QD=41.12;ReadPosRankSum=1.529;VQSLOD=4.7579;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,22:22:57.19:923,57,0	0/0:8,0:8:24.08:0,24,591	0/0:32,0:32:88.11:0,88,1845	0/0:23,0:23:67.19:0,67,1397	0/0:40,0:40:99:0,117,2792	0/0:34,0:34:99:0,102,2440	0/0:20,0:20:60.21:0,60,1479	0/0:38,0:38:99:0,114,2679	1/1:0,19:19:54.18:885,54,0	0/0:24,0:24:72.24:0,72,1690	0/0:19,0:19:57.15:0,57,1349	0/0:26,0:26:78.25:0,78,1845	0/0:25,0:25:63.20:0,63,1497	0/0:27,0:27:69.19:0,69,1580	0/0:35,0:35:99:0,102,2462	0/0:26,0:26:78.27:0,78,1917	0/0:13,0:13:27.09:0,27,656	0/0:16,0:16:48.15:0,48,1122	0/0:27,0:27:81.28:0,81,1990	0/0:27,0:27:81.26:0,81,1942	0/0:29,0:29:87.29:0,87,2093	0/0:33,0:33:99:0,99,2315	0/0:27,0:27:81.28:0,81,1968	0/0:21,0:21:63.19:0,63,1456	0/0:23,0:23:69.24:0,69,1701	0/0:43,0:43:99:0,129,2971	0/0:23,0:23:63.22:0,63,1520	0/0:20,0:20:54.16:0,54,1200
chr10	18883850	.	AATAC	A	10302.79	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=15.892;DP=684;FS=3.187;HRun=0;HaplotypeScore=125.2090;InbreedingCoeff=0.9953;MQ=86.66;MQ0=0;MQRankSum=-7.095;QD=47.92;ReadPosRankSum=3.795;VQSLOD=5.8689;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:96.33:0,96,2521	1/1:0,5:5:12.04:233,12,0	0/0:23,0:23:57.02:0,57,1488	0/0:25,0:25:51.21:0,51,1382	1/1:0,30:30:81.27:1439,81,0	0/0:20,0:20:60.21:0,60,1595	0/0:26,0:26:72.23:0,72,1858	0/0:36,0:36:99:0,105,2764	0/0:26,0:26:75.26:0,75,2020	1/1:0,21:21:63.22:1197,63,0	1/1:0,12:12:30.10:581,30,0	0/0:23,0:23:66.23:0,66,1776	1/1:2,28:30:65.97:1278,66,0	1/1:0,19:19:48.03:930,48,0	0/0:30,0:30:90.31:0,90,2399	0/0:24,0:24:69.24:0,69,1826	1/1:1,21:22:42.11:814,42,0	0/0:32,0:32:87.25:0,87,2242	0/0:19,0:19:51.17:0,51,1297	0/0:23,0:23:69.24:0,69,1881	0/0:20,0:20:57.20:0,57,1525	0/0:24,0:24:69.24:0,69,1782	0/0:19,0:19:54.17:0,54,1345	0/0:29,0:29:81.26:0,81,2020	0/0:36,0:36:99:0,102,2698	1/1:1,23:24:69.24:1334,69,0	1/1:1,35:36:93.32:1799,93,0	1/1:0,16:16:36.12:697,36,0
chr10	18884751	.	T	TACACACAC	3973.80	PASS	AB=0.902;AC=46;AF=0.885;AN=52;BaseQRankSum=0.922;DP=645;FS=1.783;HRun=0;HaplotypeScore=187.1721;InbreedingCoeff=0.1861;MQ=46.18;MQ0=28;MQRankSum=-0.778;QD=7.06;ReadPosRankSum=-3.174;VQSLOD=2.1562;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:19:12.61:166,13,0	1/1:5,0:5:2.50:9,2,0	./.	./.	1/1:19,0:19:4.50:22,4,0	1/1:31,0:31:36.20:606,36,0	1/1:25,0:24:21.34:247,21,0	1/1:38,0:35:19.48:165,19,0	0/1:16,0:16:5.84:6,0,68	1/1:25,0:23:23.21:181,23,0	1/1:16,0:16:8.99:77,9,0	1/1:14,6:20:3.01:123,3,0	1/1:11,0:8:9:84,9,0	1/1:16,0:13:4.04:12,4,0	1/1:12,0:13:9.02:177,9,0	0/0:23,0:27:21.38:0,21,599	0/1:32,0:32:2.81:302,0,3	0/1:26,0:25:16.06:16,0,528	1/1:19,0:19:14.56:184,15,0	0/1:7,11:19:6.76:179,0,7	1/1:25,0:34:10.66:111,11,0	1/1:11,1:21:6.02:187,6,0	1/1:21,0:20:13.59:288,14,0	1/1:31,12:44:3.01:115,3,0	1/1:21,0:21:8.70:176,9,0	1/1:27,0:23:23.77:258,24,0	1/1:30,0:28:15.23:107,15,0	1/1:10,0:11:11.95:175,12,0
chr10	18887078	.	CT	C	2432.82	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=8.481;DP=314;FS=2.411;HRun=9;HaplotypeScore=32.9333;InbreedingCoeff=0.9005;MQ=67.34;MQ0=2;MQRankSum=1.658;QD=19.78;ReadPosRankSum=2.572;VQSLOD=3.6033;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:34.56:0,35,181	1/1:1,6:7:18.01:165,18,0	0/0:4,0:4:0:0,0,0	0/0:8,0:5:11.70:0,12,105	1/1:3,8:11:23.94:205,24,0	0/0:12,0:12:30.07:0,30,335	0/0:9,0:9:12.04:0,12,138	0/0:26,0:25:57.13:0,57,636	0/0:6,0:6:12.12:0,12,62	1/1:3,14:17:38.85:379,39,0	1/1:0,10:10:30.02:274,30,0	0/0:7,0:7:18.05:0,18,208	1/1:3,5:8:9:82,9,0	1/1:0,8:8:21.01:192,21,0	0/0:6,0:6:6.02:0,6,69	0/0:7,0:7:18.05:0,18,208	1/1:1,26:26:50.86:467,51,0	0/0:17,0:17:33.10:0,33,381	0/0:17,0:16:42.12:0,42,477	0/0:11,0:11:33.10:0,33,381	0/0:2,0:2:6.02:0,6,69	0/0:8,0:8:18.05:0,18,208	0/0:10,0:10:30.09:0,30,346	0/0:9,0:9:21.06:0,21,242	0/0:13,0:13:36.09:0,36,406	1/1:1,17:18:51.03:467,51,0	1/1:0,15:15:39.02:357,39,0	1/1:0,2:2:6:55,6,0
chr10	18888652	.	GAAA	G	3910.58	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=5.376;DP=559;FS=8.332;HRun=13;HaplotypeScore=86.8571;InbreedingCoeff=0.9324;MQ=64.15;MQ0=6;MQRankSum=-1.153;QD=23.70;ReadPosRankSum=3.859;VQSLOD=2.5177;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:61:99:0,163,2613	1/1:5,4:9:18.04:216,18,0	0/0:16,0:8:17.79:0,18,252	0/0:15,0:9:1.51:0,2,27	1/1:5,13:18:32.95:379,33,0	0/0:23,0:27:74.68:0,75,1200	0/0:23,0:24:54.09:0,54,821	0/0:15,0:20:40.23:0,40,574	0/0:17,0:17:40.38:0,40,745	1/1:4,16:20:45.02:505,45,0	1/1:3,3:6:5.99:73,6,0	0/0:20,0:21:34.32:0,34,546	1/1:2,13:17:35.96:401,36,0	1/1:1,8:10:17.99:198,18,0	0/0:14,0:17:31.29:0,31,457	0/0:17,0:19:45.02:0,45,782	1/1:4,36:41:87.13:1039,87,0	0/0:21,0:25:62.66:0,63,1046	0/0:16,0:18:33.07:0,33,565	0/0:18,0:20:51.04:0,51,848	0/0:10,0:17:31.26:0,31,435	0/0:20,0:20:39.10:0,39,671	0/0:19,0:21:42.10:0,42,681	0/0:16,0:17:51.09:0,51,843	0/0:15,0:17:24.78:0,25,556	1/1:1,17:18:51.12:593,51,0	1/1:3,20:23:36.06:435,36,0	1/1:0,2:2:6.02:71,6,0
chr10	18889055	.	CT	C	4894.29	PASS	AB=0.920;AC=21;AF=0.375;AN=56;BaseQRankSum=4.138;DP=617;FS=11.210;HRun=10;HaplotypeScore=75.0564;InbreedingCoeff=0.9452;MQ=64.93;MQ0=3;MQRankSum=0.533;QD=20.31;ReadPosRankSum=3.160;VQSLOD=5.3095;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:33:57.45:0,57,299	1/1:1,11:11:32.99:286,33,0	0/0:13,0:11:23.61:0,24,240	0/0:12,0:10:11.80:0,12,127	1/1:1,26:27:62.95:547,63,0	0/0:23,0:23:66.18:0,66,729	0/0:16,0:15:39.58:0,40,432	0/0:34,0:34:66.11:0,66,704	0/0:5,0:19:40.21:0,40,217	1/1:5,30:35:89.96:778,90,0	1/1:1,22:23:56.97:495,57,0	0/0:21,2:23:45.95:0,46,477	1/1:3,18:21:47.98:417,48,0	1/1:0,17:17:50.99:443,51,0	0/0:27,0:26:60.12:0,60,650	0/0:19,0:20:56.99:0,57,599	1/1:1,15:16:38.99:338,39,0	0/0:18,0:18:51.14:0,51,564	0/0:11,0:12:32.92:0,33,346	0/0:28,0:28:66.18:0,66,730	0/0:13,1:14:10.11:0,10,330	0/0:36,0:35:87.12:0,87,935	0/0:28,0:28:63.13:0,63,682	0/0:20,0:20:53.36:0,53,571	0/1:21,2:23:0.99:1,0,436	1/1:3,23:26:69.44:601,69,0	1/1:2,29:31:86.98:755,87,0	1/1:1,9:10:26.99:234,27,0
chr10	18890610	.	CAAAA	C	1951.14	PASS	AB=0.695;AC=17;AF=0.304;AN=56;BaseQRankSum=-2.512;DP=416;FS=3.737;HRun=17;HaplotypeScore=75.9738;InbreedingCoeff=0.6335;MQ=48.61;MQ0=19;MQRankSum=-4.619;QD=12.43;ReadPosRankSum=3.122;VQSLOD=-0.1171;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:11:0:0,0,0	1/1:2,6:7:8.91:114,9,0	0/0:9,0:4:8.86:0,9,92	0/0:5,0:3:3.48:0,3,30	0/1:9,8:19:12.12:209,0,12	0/0:15,0:15:27.09:0,27,484	0/0:14,0:15:32.61:0,33,500	0/0:26,0:20:24.08:0,24,376	0/0:2,0:2:0:0,0,0	0/1:13,7:17:16.06:204,0,16	1/1:4,7:11:20.94:256,21,0	0/0:6,0:11:19.98:0,20,168	0/1:8,6:12:26.98:64,0,27	1/1:4,11:16:22.16:253,22,0	0/0:12,0:12:26.94:0,27,361	0/0:10,0:12:21.04:0,21,340	1/1:14,15:22:32.77:417,33,0	0/0:15,0:14:27.02:0,27,410	0/0:22,0:16:32.09:0,32,344	0/0:15,0:16:23.97:0,24,340	0/0:13,0:14:27.05:0,27,421	0/0:9,0:14:11.91:0,12,95	0/0:9,0:15:19.74:0,20,161	0/0:6,0:17:33.30:0,33,268	0/0:18,0:18:33.06:0,33,501	1/1:9,7:14:20.93:256,21,0	1/1:4,10:13:26.98:327,27,0	1/1:6,1:5:2.73:38,3,0
chr10	18890626	.	A	AG	1548.87	PASS	AB=1.000;AC=21;AF=0.404;AN=52;BaseQRankSum=-6.198;DP=385;FS=10.015;HRun=0;HaplotypeScore=66.4201;InbreedingCoeff=0.7153;MQ=59.31;MQ0=24;MQRankSum=5.185;QD=8.28;ReadPosRankSum=1.946;VQSLOD=2.9443;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	0/0:8,0:7:17.37:0,17,109	0/0:18,0:7:6.84:0,7,90	0/0:16,0:5:2.42:0,2,31	0/0:21,0:18:35.24:0,35,232	1/1:15,1:15:17.88:197,18,0	1/1:17,2:19:23.35:228,23,0	0/1:24,0:23:9.22:226,0,9	./.	0/0:13,0:11:20.41:0,20,121	0/0:11,0:11:23.39:0,23,140	1/1:11,0:9:21.06:110,21,0	0/0:14,0:12:26.50:0,27,196	0/0:14,0:13:29.18:0,29,173	1/1:15,1:13:6.49:154,6,0	0/0:12,0:11:26.92:0,27,272	0/0:25,0:22:44.01:0,44,261	0/0:13,0:12:22.25:0,22,206	0/1:19,0:16:16.03:101,0,16	0/1:12,0:12:0.60:74,0,1	1/1:13,0:12:17.82:88,18,0	1/1:10,0:9:23.06:153,23,0	1/1:13,0:13:11.15:104,11,0	1/1:20,0:17:31.97:169,32,0	1/1:14,0:14:26.37:140,26,0	0/0:16,0:14:35.41:0,35,253	0/0:14,0:13:32.18:0,32,199	0/0:1,0:1:2.90:0,3,16
chr10	18890723	.	C	CAA	3591.11	PASS	AB=0.794;AC=20;AF=0.357;AN=56;BaseQRankSum=0.641;DP=478;FS=0.937;HRun=12;HaplotypeScore=66.9257;InbreedingCoeff=0.8477;MQ=61.61;MQ0=43;MQRankSum=1.413;QD=21.76;ReadPosRankSum=-1.679;VQSLOD=2.7855;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:27:62.53:0,63,613	1/1:1,4:8:17.54:192,18,0	0/0:21,0:13:7.35:0,7,115	0/1:14,0:9:2.30:2,0,44	1/1:9,9:14:27.09:368,27,0	0/0:18,0:16:38.98:0,39,361	0/0:20,0:19:26.56:0,27,343	0/0:32,0:25:50.81:0,51,511	0/0:8,0:8:21.02:0,21,194	1/1:4,9:17:36.10:465,36,0	1/1:3,6:9:21.07:276,21,0	0/0:17,0:16:17.41:0,17,197	1/1:7,13:19:37.37:504,37,0	0/1:3,7:10:9.71:192,0,10	0/0:14,0:13:22.10:0,22,242	0/0:11,0:11:14.70:0,15,123	1/1:6,16:25:50.14:648,50,0	0/0:26,0:21:27.99:0,28,405	0/0:22,0:13:23.88:0,24,213	0/0:17,0:16:36.01:0,36,333	0/0:16,0:14:33.01:0,33,305	0/0:13,0:12:30.02:0,30,278	0/0:15,0:12:33.03:0,33,305	0/0:14,0:11:14.92:0,15,186	0/0:11,0:9:24.03:0,24,222	1/1:8,12:18:36.12:505,36,0	1/1:6,10:18:26.57:345,27,0	1/1:2,2:4:8.52:93,9,0
chr10	18890934	.	A	AT	906.23	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.574;DP=483;FS=5.798;HRun=6;HaplotypeScore=61.7993;InbreedingCoeff=0.9907;MQ=80.03;MQ0=0;MQRankSum=-2.180;QD=27.46;ReadPosRankSum=0.253;VQSLOD=4.1903;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,21:23:60.15:725,60,0	0/0:6,0:6:18.03:0,18,178	0/0:27,0:25:24.47:0,24,400	0/0:21,0:17:32.12:0,32,348	0/0:17,0:17:39.09:0,39,396	0/0:14,0:14:42.10:0,42,428	0/0:16,0:16:39.07:0,39,390	0/0:25,0:25:57.12:0,57,581	1/1:1,9:10:24.08:302,24,0	0/0:25,0:25:63.08:0,63,622	0/0:13,0:13:30.07:0,30,305	0/0:17,0:17:51.07:0,51,504	0/0:20,0:20:54.12:0,54,551	0/0:16,0:16:48.09:0,48,482	0/0:13,0:13:39.09:0,39,398	0/0:18,0:18:54.11:0,54,543	0/0:24,0:24:63.11:0,63,634	0/0:16,0:16:42.05:0,42,418	0/0:16,0:16:45.09:0,45,453	0/0:17,0:17:45.10:0,45,459	0/0:21,0:21:63.12:0,63,630	0/0:14,0:14:33.07:0,33,335	0/0:11,0:11:30.07:0,30,306	0/0:15,0:15:45.07:0,45,445	0/0:17,0:17:39.07:0,39,392	0/0:24,0:24:57.11:0,57,577	0/0:20,0:20:60.12:0,60,606	0/0:7,0:7:21.05:0,21,214
chr10	18892626	.	T	TATGTGTGTGAGTGC	35905.39	PASS	AB=0.946;AC=29;AF=0.518;AN=56;BaseQRankSum=7.594;DP=1475;FS=34.045;HRun=0;HaplotypeScore=884.0453;InbreedingCoeff=0.4827;MQ=41.86;MQ0=5;MQRankSum=-15.642;QD=41.37;ReadPosRankSum=-1.367;VQSLOD=0.5196;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:13,5:23:27.19:616,0,27	1/1:11,3:19:10.30:843,10,0	0/0:23,0:15:33.69:0,34,964	0/0:32,0:23:53.89:0,54,1433	1/1:22,13:49:8.01:548,8,0	0/1:45,0:46:7.60:8,0,2434	0/1:37,0:37:0.97:1,0,1926	0/1:76,0:75:99:201,0,4794	1/1:22,20:51:36.72:2144,37,0	1/1:68,40:119:99:12065,260,0	1/1:24,19:54:5.34:1424,5,0	0/1:78,0:80:99:112,0,3197	1/1:28,21:58:90.57:3909,91,0	1/1:19,16:38:2.30:812,2,0	0/0:80,0:89:99:0,136,5221	0/0:72,0:84:30.79:0,31,4681	1/1:6,11:20:18.86:483,19,0	0/1:27,0:27:99:153,0,2027	0/1:34,0:32:99:300,0,1594	0/0:60,0:66:41.98:0,42,3638	0/0:84,0:82:77.42:0,77,4609	0/0:68,0:76:96.56:0,97,3321	0/0:49,0:52:62.63:0,63,3465	0/0:44,0:49:56.25:0,56,1999	0/0:50,0:52:99:0,103,3740	1/1:35,28:66:70.20:6391,70,0	1/1:28,20:56:87.77:4574,88,0	1/1:2,6:14:27.06:1322,27,0
chr10	18892777	.	A	AGT	3466.89	PASS	AB=0.808;AC=35;AF=0.673;AN=52;BaseQRankSum=-2.595;DP=637;FS=17.393;HRun=0;HaplotypeScore=239.5395;InbreedingCoeff=-0.0415;MQ=44.81;MQ0=7;MQRankSum=-0.306;QD=6.80;ReadPosRankSum=-0.931;VQSLOD=1.3344;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:15:3.63:0,4,14	1/1:8,0:9:4.98:32,5,0	./.	./.	0/1:3,0:20:0.59:2,0,1	1/1:22,7:29:10.56:179,11,0	0/1:20,8:28:33.03:244,0,33	0/0:44,0:38:18.46:0,18,132	1/1:9,0:16:20.52:124,21,0	0/1:24,0:25:16.94:103,0,17	1/1:8,0:17:3.96:11,4,0	1/1:28,5:33:3.23:130,3,0	1/1:11,0:12:5.46:43,5,0	1/1:18,0:18:2.71:25,3,0	0/1:33,9:43:43.59:300,0,44	0/0:26,0:27:23.86:0,24,230	1/1:6,0:16:9.47:79,9,0	0/1:19,0:19:7.37:7,0,159	0/1:17,2:18:98.69:99,0,113	0/1:22,8:30:15.57:512,0,16	1/1:30,6:36:27.33:259,27,0	0/1:19,8:27:36.45:291,0,36	0/1:16,3:19:23.88:184,0,24	0/1:9,15:24:9.06:336,0,9	0/1:15,4:19:32.16:207,0,32	1/1:18,0:17:15.78:81,16,0	1/1:17,0:22:2.15:143,2,0	1/1:1,0:9:9:78,9,0
chr10	18893318	.	A	AT	7415.29	PASS	AB=0.647;AC=23;AF=0.411;AN=56;BaseQRankSum=-13.524;DP=659;FS=4.147;HRun=9;HaplotypeScore=60.2207;InbreedingCoeff=0.9097;MQ=77.45;MQ0=0;MQRankSum=-2.147;QD=25.39;ReadPosRankSum=2.417;VQSLOD=5.7615;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,40:44:99:1228,111,0	1/1:1,9:10:24.06:266,24,0	0/0:21,0:21:32.96:0,33,286	0/0:11,0:12:18.18:0,18,200	1/1:8,17:25:48.09:518,48,0	0/0:22,0:22:59.99:0,60,521	0/0:13,1:14:2.77:0,3,245	0/0:33,0:34:74:0,74,629	1/1:2,13:15:36.10:398,36,0	1/1:4,35:40:99:1126,105,0	1/1:4,18:22:28.10:538,28,0	0/0:17,0:17:50.97:0,51,439	1/1:5,11:16:33.09:362,33,0	1/1:1,19:20:51.14:564,51,0	0/0:31,0:31:89.91:0,90,767	0/0:22,0:22:56.96:0,57,491	1/1:2,24:26:40.11:664,40,0	0/0:27,0:27:71.95:0,72,620	0/0:30,0:30:83.95:0,84,722	0/0:20,0:20:53.98:0,54,469	0/0:16,0:16:38.98:0,39,338	0/0:22,0:22:56.97:0,57,495	0/0:23,0:23:59.99:0,60,521	0/0:20,0:20:53.98:0,54,469	0/0:36,0:36:80.93:0,81,698	1/1:4,19:23:60.12:642,60,0	1/1:6,34:40:87.07:962,87,0	0/1:5,6:11:8.01:147,0,8
chr10	18893863	.	T	TA	8609.84	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-14.670;DP=591;FS=0.319;HRun=6;HaplotypeScore=52.2123;InbreedingCoeff=0.9970;MQ=73.18;MQ0=0;MQRankSum=-0.896;QD=31.20;ReadPosRankSum=2.807;VQSLOD=5.1998;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,31:34:23.04:920,23,0	1/1:1,6:7:18.06:226,18,0	0/0:16,0:16:36.03:0,36,352	0/0:8,0:8:17.98:0,18,166	1/1:3,22:25:63.20:793,63,0	0/0:18,0:18:48.11:0,48,490	0/0:23,0:23:57.12:0,57,581	0/0:23,0:23:60.12:0,60,606	1/1:0,20:20:57.18:717,57,0	1/1:1,21:22:57.18:717,57,0	1/1:2,15:17:42.13:528,42,0	0/0:26,0:26:69.12:0,69,690	1/1:0,17:17:48.15:604,48,0	1/1:3,20:23:57.18:717,57,0	0/0:30,0:30:84.18:0,84,851	0/0:24,0:24:63.14:0,63,643	1/1:3,26:29:69.22:868,69,0	0/0:18,0:18:51.11:0,51,520	0/0:16,0:16:45.07:0,45,451	0/0:21,0:21:63.13:0,63,635	0/0:10,0:10:27.06:0,27,275	0/0:12,0:12:33.07:0,33,336	0/0:25,0:25:63.11:0,63,630	0/0:15,0:15:36.08:0,36,367	0/0:30,0:30:84.17:0,84,850	1/1:7,26:33:78.25:980,78,0	1/1:3,34:37:96.31:1208,96,0	1/1:0,12:12:27.08:332,27,0
chr10	18894203	.	A	AT	11910.30	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-7.011;DP=712;FS=1.619;HRun=2;HaplotypeScore=68.6271;InbreedingCoeff=0.9994;MQ=80.26;MQ0=0;MQRankSum=-2.603;QD=39.31;ReadPosRankSum=4.417;VQSLOD=5.1908;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,41:42:99:1685,117,0	1/1:0,11:11:33.11:475,33,0	0/0:16,0:16:36.09:0,36,428	0/0:21,0:21:47.78:0,48,529	1/1:0,27:27:78.18:1077,78,0	0/0:21,0:21:60.19:0,60,744	0/0:31,0:31:87.24:0,87,1050	0/0:36,0:36:99:0,102,1243	1/1:2,28:30:78.26:1123,78,0	1/1:4,28:32:78.26:1123,78,0	1/1:0,22:22:63.21:907,63,0	0/0:23,0:23:63.20:0,63,781	1/1:1,25:26:72.24:1037,72,0	1/1:1,28:30:81.27:1157,81,0	0/0:28,0:28:81.24:0,81,992	0/0:28,0:28:78.24:0,78,967	1/1:0,27:27:78.26:1123,78,0	0/0:25,0:25:72.21:0,72,878	0/0:33,0:33:96.25:0,96,1161	0/0:21,0:21:63.19:0,63,768	0/0:38,0:38:99:0,99,1227	0/0:20,0:20:54.17:0,54,669	0/0:19,0:19:57.16:0,57,693	0/0:25,0:25:75.24:0,75,929	0/0:24,0:24:69.19:0,69,840	1/1:1,24:25:72.24:1037,72,0	1/1:2,22:24:60.20:864,60,0	1/1:0,7:7:21.07:302,21,0
chr10	18898029	.	TTG	T	15568.59	PASS	AB=0.979;AC=51;AF=0.911;AN=56;BaseQRankSum=3.563;DP=528;FS=3.395;HRun=0;HaplotypeScore=178.2220;InbreedingCoeff=0.5678;MQ=57.09;MQ0=7;MQRankSum=-5.564;QD=30.17;ReadPosRankSum=1.751;VQSLOD=6.3182;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,9:16:32.67:358,33,0	1/1:4,1:4:10.62:88,11,0	0/1:31,0:14:8.01:8,0,107	0/1:29,0:9:1.20:1,0,29	1/1:7,12:19:48.67:598,49,0	1/1:3,15:18:54.10:740,54,0	1/1:3,17:20:60.19:869,60,0	1/1:16,17:32:56.56:1011,57,0	1/1:2,5:7:21.02:271,21,0	1/1:5,13:18:52.88:677,53,0	1/1:8,11:19:44.85:542,45,0	1/1:6,15:21:59.82:768,60,0	1/1:10,7:17:42.89:480,43,0	1/1:4,8:12:35.93:446,36,0	1/1:7,22:29:87.16:1186,87,0	0/1:14,1:15:3.53:4,0,412	1/1:3,3:6:14.82:144,15,0	0/0:12,0:12:13.04:0,13,313	1/1:9,10:16:42.11:558,42,0	1/1:8,19:27:77.67:1038,78,0	1/1:3,6:9:21.03:267,21,0	1/1:5,16:21:59.26:764,59,0	1/1:2,16:18:49.61:699,50,0	1/1:4,14:18:48.13:640,48,0	1/1:11,20:31:90.03:1154,90,0	1/1:4,17:21:63.11:850,63,0	1/1:6,14:20:60.17:829,60,0	1/1:8,9:17:48.03:578,48,0
chr10	18898030	.	TG	T	9789.47	PASS	AB=0.958;AC=51;AF=0.911;AN=56;BaseQRankSum=4.801;DP=528;FS=3.545;HRun=1;HaplotypeScore=193.8548;InbreedingCoeff=0.5235;MQ=55.75;MQ0=8;MQRankSum=-5.538;QD=18.97;ReadPosRankSum=0.557;VQSLOD=4.8715;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:15:35.20:274,35,0	1/1:4,1:4:10.78:76,11,0	0/1:31,1:15:5.26:5,0,101	0/1:23,3:7:1.63:2,0,26	1/1:19,1:20:45.48:357,45,0	1/1:18,0:18:53.92:455,54,0	1/1:20,0:20:59.88:504,60,0	1/1:30,1:30:63.10:672,63,0	1/1:9,0:9:20.97:177,21,0	1/1:18,0:18:49.77:409,50,0	1/1:17,2:19:41.95:340,42,0	1/1:21,0:21:59.58:481,60,0	1/1:15,0:15:44.29:347,44,0	1/1:12,0:12:35.84:293,36,0	1/1:28,1:29:86.80:715,87,0	0/1:15,0:15:11.44:11,0,297	1/1:7,0:7:14.76:100,15,0	0/0:12,0:12:12.99:0,13,245	1/1:19,1:17:41.86:355,42,0	1/1:27,0:27:76.29:619,76,0	1/1:9,0:9:20.90:164,21,0	1/1:20,0:20:58.74:470,59,0	1/1:18,0:18:52.12:419,52,0	1/1:18,0:18:47.86:392,48,0	1/1:31,0:31:89.75:738,90,0	1/1:22,0:22:62.81:515,63,0	1/1:19,1:20:58.24:498,58,0	1/1:14,2:16:47.92:402,48,0
chr10	18898046	.	TTTTG	T	5348.88	PASS	AB=1.000;AC=27;AF=0.482;AN=56;BaseQRankSum=0.758;DP=609;FS=2.193;HRun=0;HaplotypeScore=300.1466;InbreedingCoeff=0.7860;MQ=42.85;MQ0=15;MQRankSum=-5.569;QD=19.24;ReadPosRankSum=-1.299;VQSLOD=4.1826;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:19:28.12:325,28,0	1/1:9,2:10:26.45:310,26,0	0/1:55,0:13:5.86:6,0,69	0/0:51,0:12:6.62:0,7,84	1/1:17,5:22:50.66:609,51,0	0/0:20,0:20:60.20:0,60,1066	0/0:20,0:20:54.06:0,54,869	0/0:34,0:33:55.76:0,56,922	1/1:7,1:8:7.43:168,7,0	1/1:15,8:22:44.59:750,45,0	1/1:18,5:23:57.62:698,58,0	0/0:22,0:22:56.71:0,57,828	1/1:11,5:16:31.79:353,32,0	1/1:8,4:12:21.61:261,22,0	0/0:29,0:29:61.20:0,61,1370	0/1:14,0:14:7.36:7,0,719	1/1:9,0:9:8.65:117,9,0	0/0:19,0:18:26.13:0,26,615	0/0:20,0:17:28.87:0,29,453	0/0:26,0:26:59.82:0,60,923	0/1:11,0:10:7.87:8,0,70	0/0:20,0:20:54.88:0,55,905	0/0:24,0:24:63.52:0,64,963	0/0:16,0:16:34.35:0,34,511	0/0:29,0:29:67.94:0,68,1085	1/1:17,6:23:52.83:750,53,0	1/1:14,7:21:51.13:760,51,0	1/1:9,1:10:16.86:228,17,0
chr10	18898049	.	TG	T	1870.07	PASS	AB=0.987;AC=19;AF=0.339;AN=56;BaseQRankSum=4.950;DP=606;FS=1.170;HRun=1;HaplotypeScore=282.5473;InbreedingCoeff=0.3704;MQ=42.46;MQ0=18;MQRankSum=-4.763;QD=8.99;ReadPosRankSum=1.209;VQSLOD=1.2150;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:20:20.99:197,21,0	1/1:11,0:10:29.09:185,29,0	0/0:55,2:13:2.33:0,2,40	0/0:51,5:13:2.26:0,2,85	1/1:22,0:22:25.15:290,25,0	0/0:21,0:21:60.20:0,60,823	0/0:20,0:20:57.03:0,57,729	0/0:31,0:30:71.85:0,72,787	1/1:8,0:8:2.36:57,2,0	0/1:23,0:22:62.78:170,0,63	1/1:19,2:22:41.56:284,42,0	0/0:20,0:20:59.64:0,60,653	0/1:16,0:16:0.76:173,0,1	0/1:12,0:12:36.46:88,0,36	0/0:27,0:27:60.82:0,61,968	0/0:14,0:14:11.55:0,12,408	1/1:9,0:9:0.61:75,1,0	0/0:19,0:18:31.33:0,31,427	0/0:20,0:17:36.69:0,37,373	0/0:24,0:24:63.15:0,63,781	0/1:12,0:11:4.52:5,0,44	0/0:21,0:21:51.20:0,51,673	0/0:24,1:25:56.48:0,56,805	0/0:14,0:14:29.29:0,29,404	0/0:26,0:26:66.69:0,67,905	0/1:21,0:21:47.95:257,0,48	0/1:21,0:21:33.23:194,0,33	0/1:9,0:10:60.86:73,0,61
chr10	18898050	.	G	GTTT	4876.69	PASS	AB=1.000;AC=25;AF=0.446;AN=56;BaseQRankSum=2.238;DP=610;FS=0.363;HRun=6;HaplotypeScore=300.7423;InbreedingCoeff=0.7423;MQ=42.35;MQ0=20;MQRankSum=-4.351;QD=21.20;ReadPosRankSum=-0.085;VQSLOD=-0.7041;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:20:36.50:513,36,0	1/1:9,2:10:29.19:348,29,0	0/0:59,0:13:11.36:0,11,102	0/0:57,0:13:5.56:0,6,78	1/1:21,1:22:41.21:507,41,0	0/0:21,0:21:60.13:0,60,896	0/0:19,0:19:56.87:0,57,737	0/0:30,0:29:64.63:0,65,791	1/1:8,0:8:17.87:176,18,0	1/1:19,4:22:9.62:616,10,0	1/1:18,4:22:50.13:667,50,0	0/0:20,0:20:48.50:0,49,647	1/1:14,1:15:29.25:308,29,0	1/1:14,0:14:23.36:188,23,0	0/0:27,0:27:54.31:0,54,923	0/0:14,0:14:20.08:0,20,481	1/1:10,0:9:7.96:159,8,0	0/0:19,0:18:37.51:0,38,474	0/1:18,0:16:60.49:60,0,291	0/0:24,0:24:20.56:0,21,670	0/1:12,0:11:33.35:33,0,40	0/0:21,0:22:27.55:0,28,753	0/0:25,0:25:64.72:0,65,719	0/0:16,0:16:25.31:0,25,405	0/0:26,0:26:68.81:0,69,851	1/1:18,3:21:22.21:625,22,0	1/1:21,0:22:47.95:562,48,0	0/1:10,0:10:21.93:113,0,22
chr10	18898055	.	TTTGTG	T	4758.20	PASS	AB=1.000;AC=25;AF=0.446;AN=56;BaseQRankSum=1.722;DP=597;FS=0.363;HRun=0;HaplotypeScore=307.9101;InbreedingCoeff=0.8877;MQ=42.26;MQ0=23;MQRankSum=-5.801;QD=24.78;ReadPosRankSum=-0.122;VQSLOD=3.8581;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:17:29.91:252,30,0	1/1:10,1:10:26.33:291,26,0	0/0:68,0:13:24.67:0,25,215	0/0:59,0:14:16.54:0,17,72	1/1:21,0:21:49.93:609,50,0	0/0:22,0:22:32.81:0,33,479	0/0:21,0:21:45.83:0,46,488	0/0:31,0:29:41.20:0,41,537	1/1:7,0:7:6.65:126,7,0	1/1:22,1:21:28.09:598,28,0	1/1:20,1:21:62.26:684,62,0	0/0:19,0:19:30.80:0,31,380	1/1:12,1:13:34.87:331,35,0	1/1:13,0:13:26.24:230,26,0	0/0:27,0:27:34.84:0,35,671	0/0:14,0:14:5.81:0,6,704	1/1:9,0:8:21.35:120,21,0	0/0:19,0:18:23.87:0,24,705	0/0:15,0:14:8.23:0,8,230	0/0:23,0:23:45.05:0,45,466	0/1:10,0:9:15.97:16,0,31	0/0:21,0:21:37.30:0,37,459	0/0:25,0:25:34.99:0,35,451	0/0:16,0:16:26.07:0,26,263	0/0:25,0:25:51.45:0,51,491	1/1:19,0:19:51.90:646,52,0	1/1:20,0:19:36.38:567,36,0	1/1:6,1:6:17.95:288,18,0
chr10	18898057	.	TGTG	T	2720.41	PASS	AB=1.000;AC=25;AF=0.446;AN=56;BaseQRankSum=1.924;DP=601;FS=0.000;HRun=0;HaplotypeScore=295.0213;InbreedingCoeff=0.7016;MQ=41.96;MQ0=24;MQRankSum=-3.940;QD=11.88;ReadPosRankSum=-0.619;VQSLOD=2.3313;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:17:19.36:155,19,0	1/1:12,0:11:20.77:148,21,0	0/0:69,0:13:24.32:0,24,203	0/0:61,0:14:20.84:0,21,93	1/1:22,1:23:27.59:313,28,0	0/0:22,0:22:33.80:0,34,639	0/0:21,0:21:56.56:0,57,619	0/1:31,0:29:56.81:57,0,517	1/1:7,0:7:5.89:101,6,0	1/1:25,0:22:20.41:424,20,0	1/1:21,1:22:50.24:416,50,0	0/0:19,0:19:38.13:0,38,415	1/1:12,1:13:7.91:202,8,0	0/1:14,0:14:14.16:166,0,14	0/0:26,1:27:15.61:0,16,782	0/0:15,0:15:8.79:0,9,526	1/1:9,0:8:8.63:103,9,0	0/0:17,1:17:28.77:0,29,537	0/0:14,0:14:0.61:0,1,292	0/0:20,0:20:21.91:0,22,479	0/1:10,0:9:6.77:7,0,36	0/0:22,0:22:12.59:0,13,558	0/0:24,0:24:47.56:0,48,535	0/0:15,0:15:9.32:0,9,305	0/0:24,0:24:58.30:0,58,595	1/1:19,0:19:21.36:322,21,0	1/1:18,0:18:14.11:344,14,0	1/1:7,0:6:17.25:173,17,0
chr10	18898058	.	GTGT	G	1337.67	PASS	AB=0.850;AC=19;AF=0.339;AN=56;BaseQRankSum=-0.045;DP=597;FS=0.000;HRun=0;HaplotypeScore=297.2771;InbreedingCoeff=-0.1325;MQ=41.86;MQ0=25;MQRankSum=-2.211;QD=4.81;ReadPosRankSum=-1.622;VQSLOD=1.9673;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:14,0:17:11.55:44,0,12	0/1:10,2:11:0.52:58,0,1	0/0:70,0:13:18.39:0,18,170	0/0:63,0:14:8.44:0,8,50	0/1:15,5:23:22.77:140,0,23	0/0:21,1:22:7.26:0,7,294	0/0:19,0:19:50.25:0,50,341	0/1:27,3:29:99:172,0,207	1/1:5,0:7:1.92:41,2,0	0/1:22,3:22:8.93:213,0,9	0/1:17,4:22:7.16:162,0,7	0/0:18,0:18:14.87:0,15,161	0/1:14,0:14:32.85:52,0,33	0/1:12,2:14:52.04:76,0,52	0/0:26,1:27:11.41:0,11,376	0/0:14,0:15:31.57:0,32,511	0/1:5,3:7:17.84:97,0,18	0/0:18,0:17:21.84:0,22,568	0/1:11,1:13:20.38:20,0,175	0/1:19,1:20:11.31:11,0,195	0/1:8,1:7:6.30:6,0,21	0/0:21,1:22:9.62:0,10,275	0/0:22,0:23:40.29:0,40,218	0/1:14,1:15:12.68:13,0,111	0/0:22,0:22:42.91:0,43,259	0/1:14,6:20:4.24:168,0,4	0/1:13,6:18:25.07:131,0,25	1/1:5,2:6:12.55:95,13,0
chr10	18898074	.	TTGG	T	7419.60	PASS	AB=0.957;AC=37;AF=0.661;AN=56;BaseQRankSum=-1.920;DP=597;FS=1.285;HRun=0;HaplotypeScore=292.3676;InbreedingCoeff=0.0081;MQ=33.79;MQ0=34;MQRankSum=-0.783;QD=14.93;ReadPosRankSum=2.022;VQSLOD=4.1843;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:17:6.92:199,7,0	0/1:12,0:11:3.23:3,0,113	0/1:64,0:9:28.20:28,0,74	0/0:71,0:11:8.32:0,8,61	0/1:24,0:25:73.59:74,0,102	1/1:7,11:18:39.80:591,40,0	1/1:8,6:14:36.12:490,36,0	0/1:18,6:22:38.06:363,0,38	1/1:6,0:6:16.44:120,16,0	0/1:31,0:27:99:126,0,145	0/1:25,0:24:77.50:77,0,96	1/1:9,7:16:22.80:587,23,0	0/1:16,0:16:62.21:73,0,62	0/1:14,0:14:13.26:13,0,121	1/1:11,13:24:59.60:861,60,0	0/1:13,0:12:1.24:1,0,303	0/1:13,0:12:33.31:79,0,33	0/0:19,0:18:15.69:0,16,385	0/1:8,5:12:5.67:277,0,6	1/1:7,9:16:8.08:455,8,0	1/1:10,0:5:11.58:78,12,0	1/1:8,11:19:41.75:625,42,0	1/1:7,16:23:67:903,67,0	1/1:6,8:14:33.22:488,33,0	1/1:8,13:21:39.16:766,39,0	0/1:23,1:24:36.98:37,0,123	0/1:24,0:22:35.04:103,0,35	0/0:10,0:8:8.38:0,8,51
chr10	18898075	.	TGG	T	6336	PASS	AB=0.933;AC=36;AF=0.643;AN=56;BaseQRankSum=-0.420;DP=581;FS=0.849;HRun=2;HaplotypeScore=282.0387;InbreedingCoeff=-0.0212;MQ=32.18;MQ0=33;MQRankSum=0.194;QD=13.51;ReadPosRankSum=2.666;VQSLOD=1.9731;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:17,1:17:13.58:272,14,0	0/0:12,0:11:3.68:0,4,68	0/1:54,6:9:30.46:30,0,73	0/0:69,2:10:9.11:0,9,63	0/1:24,1:25:45.63:103,0,46	1/1:14,2:16:29.85:444,30,0	1/1:6,6:12:36.10:423,36,0	0/1:19,5:22:55.60:304,0,56	1/1:6,0:6:17.94:179,18,0	0/1:28,2:26:92.10:137,0,92	0/1:22,2:23:75.21:87,0,75	1/1:10,6:16:14.04:441,14,0	0/1:15,1:16:34.01:107,0,34	0/1:12,2:14:37:37,0,91	1/1:16,7:23:57.54:698,58,0	0/1:13,0:12:28.51:29,0,238	0/1:11,2:12:16.97:120,0,17	0/0:18,0:18:14.30:0,14,336	0/1:11,0:10:14.23:207,0,14	1/1:12,3:15:4.69:365,5,0	1/1:9,0:5:11.44:71,11,0	1/1:17,1:18:42.27:464,42,0	1/1:20,3:23:67.88:684,68,0	1/1:10,4:14:29.13:375,29,0	1/1:15,5:20:28.99:577,29,0	0/1:23,1:24:72.17:72,0,76	0/1:24,0:22:30.97:109,0,31	0/0:10,0:8:5.21:0,5,44
chr10	18898082	.	T	TG	304.34	PASS	AB=0.958;AC=12;AF=0.214;AN=56;BaseQRankSum=0.043;DP=571;FS=18.424;HRun=0;HaplotypeScore=297.1310;InbreedingCoeff=-0.2303;MQ=32.21;MQ0=32;MQRankSum=-1.464;QD=1.15;ReadPosRankSum=-2.338;VQSLOD=0.8686;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:23.09:0,23,126	0/1:11,0:10:8.16:8,0,41	0/0:54,0:8:14.77:0,15,100	0/1:63,0:9:0.42:0,0,22	0/1:24,0:24:5.47:5,0,136	0/0:18,0:17:43.29:0,43,290	0/0:11,0:11:26.41:0,26,162	0/1:27,1:26:62.11:62,0,121	0/0:6,0:6:16.48:0,16,77	0/1:28,2:26:99:116,0,110	0/1:23,0:22:2.42:2,0,151	0/0:15,0:15:38.84:0,39,290	0/1:16,0:16:24.04:24,0,74	0/1:13,1:14:8.84:9,0,101	0/0:24,0:24:58.50:0,59,417	0/0:18,0:17:19.89:0,20,278	0/1:8,4:11:50.93:157,0,51	0/0:17,0:16:29.27:0,29,256	0/0:13,0:12:32.45:0,32,256	0/0:15,0:15:36.48:0,36,250	0/1:9,0:5:18.57:19,0,26	0/0:16,0:16:22.68:0,23,269	0/0:24,0:23:63.60:0,64,450	0/0:15,0:15:12.55:0,13,193	0/0:20,0:20:52.09:0,52,377	0/0:24,0:24:9.59:0,10,145	0/1:23,2:23:32.54:33,0,269	0/1:8,0:6:3.71:4,0,18
chr10	18898085	.	T	TTG	2184.94	PASS	AB=0.980;AC=24;AF=0.429;AN=56;BaseQRankSum=-2.243;DP=554;FS=27.907;HRun=0;HaplotypeScore=288.8718;InbreedingCoeff=0.2185;MQ=30.51;MQ0=36;MQRankSum=0.638;QD=7.78;ReadPosRankSum=1.806;VQSLOD=2.0348;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,9:15:35.07:492,35,0	0/1:11,0:10:29.78:30,0,111	0/0:47,0:8:10.21:0,10,62	0/0:62,0:7:4.59:0,5,30	0/0:22,0:23:22.32:0,22,187	0/1:17,0:16:1.32:147,0,1	1/1:9,0:9:9.62:51,10,0	0/1:26,0:24:38.48:166,0,38	1/1:1,5:6:18.06:278,18,0	0/1:29,0:26:17.35:17,0,232	0/0:24,0:23:17.84:0,18,186	0/1:14,0:14:23.73:65,0,24	0/1:15,0:16:10.13:10,0,121	0/0:14,0:14:32.22:0,32,219	0/1:24,0:24:22.18:145,0,22	0/0:19,0:18:21.35:0,21,295	0/0:12,0:11:5.38:0,5,93	0/0:16,0:15:30.07:0,30,352	0/1:14,2:14:28.78:209,0,29	0/1:14,0:14:38.62:59,0,39	1/1:9,0:5:6.51:24,7,0	1/1:15,0:16:33.67:162,34,0	1/1:24,0:23:45.49:282,45,0	0/1:15,0:14:6.74:64,0,7	1/1:19,0:19:20.09:169,20,0	0/0:21,0:23:3.01:0,3,242	0/0:24,0:22:24.58:0,25,203	0/0:8,0:6:3.15:0,3,74
chr10	18898086	.	TTTG	T	2044.26	PASS	AB=0.970;AC=22;AF=0.393;AN=56;BaseQRankSum=1.159;DP=543;FS=3.692;HRun=0;HaplotypeScore=291.1949;InbreedingCoeff=0.2562;MQ=30.56;MQ0=35;MQRankSum=-0.779;QD=5.79;ReadPosRankSum=1.217;VQSLOD=2.4642;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:12,1:13:23.18:23,0,213	0/1:11,0:10:11.14:173,0,11	0/1:45,0:8:6.26:6,0,34	0/1:59,0:6:13.33:13,0,15	1/1:22,0:22:22.81:237,23,0	0/0:17,0:16:38.33:0,38,190	0/0:9,0:9:4.59:0,5,39	0/1:25,0:23:13.68:14,0,108	0/0:6,0:6:13.62:0,14,109	1/1:29,1:26:30.80:397,31,0	1/1:23,1:23:23.24:322,23,0	0/0:14,0:14:5.56:0,6,86	1/1:15,1:16:33.31:256,33,0	0/1:14,0:14:8.80:32,0,9	0/0:24,0:24:19.86:0,20,215	0/0:18,0:17:24.57:0,25,282	0/1:12,0:11:37.15:70,0,37	0/0:16,0:15:3.41:0,3,239	0/0:16,0:14:18.61:0,19,318	0/0:14,0:14:34.56:0,35,165	0/1:8,2:5:3.72:45,0,4	0/0:15,0:15:25.94:0,26,125	0/0:23,0:22:39.27:0,39,184	0/1:14,1:14:41.93:42,0,42	0/0:18,0:18:25.35:0,25,171	1/1:21,2:23:27.53:311,28,0	0/1:25,0:23:16:201,0,16	1/1:8,0:6:14:90,14,0
chr10	18898087	.	TTG	T	1295.39	PASS	AB=0.983;AC=21;AF=0.375;AN=56;BaseQRankSum=1.950;DP=537;FS=5.254;HRun=0;HaplotypeScore=284.8743;InbreedingCoeff=-0.0637;MQ=30.70;MQ0=35;MQRankSum=-1.368;QD=3.58;ReadPosRankSum=0.502;VQSLOD=2.2332;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:14,0:14:16.05:16,0,101	0/1:10,1:10:40.26:68,0,40	0/1:40,1:7:9.28:9,0,34	0/1:59,0:6:6.72:7,0,24	0/1:22,0:22:20.72:122,0,21	0/0:17,0:16:37.88:0,38,264	0/0:9,0:9:5.30:0,5,106	0/1:22,0:20:51.23:51,0,159	0/1:6,0:6:22.98:32,0,23	1/1:27,3:26:0.34:233,0,0	1/1:23,1:23:9.52:163,10,0	0/0:13,0:13:15.63:0,16,217	1/1:16,0:16:15.29:161,15,0	0/0:14,0:14:0.07:0,0,46	0/1:24,0:24:12.15:12,0,349	0/0:18,0:17:16.16:0,16,218	0/1:12,0:11:34.77:58,0,35	0/0:16,0:15:9.14:0,9,214	0/0:17,0:15:0.27:0,0,317	0/0:13,1:14:33.96:0,34,239	0/1:10,0:5:1.23:46,0,1	0/0:15,0:15:34.39:0,34,260	0/0:23,0:22:39.87:0,40,366	0/1:14,0:13:27.14:27,0,143	0/0:19,0:19:45.51:0,46,335	1/1:23,0:23:18.68:176,19,0	0/1:25,0:23:41.90:196,0,42	0/1:7,1:6:20.24:84,0,20
chr10	18898107	.	TTTG	T	1905.83	PASS	AB=0.986;AC=29;AF=0.518;AN=56;BaseQRankSum=7.210;DP=499;FS=3.396;HRun=0;HaplotypeScore=265.6639;InbreedingCoeff=-0.5250;MQ=26.48;MQ0=28;MQRankSum=-1.581;QD=4.89;ReadPosRankSum=5.477;VQSLOD=2.0757;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:15,0:15:20.34:91,0,20	1/1:11,1:12:14.24:141,14,0	0/0:29,0:4:5.46:0,5,69	0/0:67,1:3:0.04:0,0,20	1/1:16,1:16:24.68:160,25,0	0/1:9,0:8:15.73:16,0,46	0/1:7,0:6:11.21:11,0,25	0/1:16,0:13:29.49:29,0,173	0/1:5,0:5:33.35:61,0,33	0/1:25,1:26:24.13:186,0,24	0/1:15,1:15:19.93:137,0,20	1/1:12,0:11:19.43:89,19,0	0/1:18,0:18:60.77:83,0,61	0/1:15,0:15:32.79:33,0,53	0/1:22,0:22:79.95:98,0,80	0/1:19,0:19:12.15:12,0,184	0/1:14,0:14:40.62:62,0,41	0/1:19,0:19:46.82:47,0,50	0/1:19,0:16:6.53:7,0,219	0/1:13,0:13:46.01:58,0,46	0/0:10,0:6:7.01:0,7,34	0/1:12,0:12:54.21:54,0,96	0/1:20,0:18:42.70:67,0,43	0/1:19,0:18:25.45:25,0,111	0/1:17,0:17:66.23:66,0,94	1/1:19,1:19:13.63:198,14,0	0/1:20,0:20:2.68:265,0,3	0/1:6,2:6:67.94:68,0,91
chr10	18898109	.	TG	T	1044.45	PASS	AB=0.992;AC=31;AF=0.554;AN=56;BaseQRankSum=4.263;DP=506;FS=4.258;HRun=1;HaplotypeScore=256.8097;InbreedingCoeff=-0.3028;MQ=26.30;MQ0=31;MQRankSum=-0.173;QD=2.76;ReadPosRankSum=4.159;VQSLOD=-0.1160;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:15:10.32:95,10,0	0/1:12,0:12:7.65:28,0,8	0/0:27,4:4:5.29:0,5,45	0/0:69,1:4:0.23:0,0,5	1/1:16,0:16:16.03:94,16,0	0/1:10,0:9:0.86:24,0,1	0/1:7,0:6:5.88:22,0,6	0/0:17,0:14:21.91:0,22,170	0/1:6,0:5:7.81:43,0,8	0/1:25,1:26:39.17:62,0,39	0/1:17,0:16:8.50:31,0,8	1/1:12,0:11:19.83:81,20,0	0/1:19,0:18:10.73:11,0,81	0/1:15,0:15:19.17:19,0,40	1/1:21,1:22:1.40:114,1,0	0/1:18,0:18:26.65:27,0,82	0/1:14,0:14:15.18:15,0,28	0/1:20,0:20:16.17:59,0,16	0/1:20,0:16:20.35:20,0,150	1/1:13,0:13:18.16:74,18,0	0/0:10,0:6:3.76:0,4,36	0/1:12,0:12:36.15:36,0,48	1/1:20,0:18:2.58:71,3,0	0/1:19,0:18:33.54:34,0,46	0/1:17,0:17:18.66:60,0,19	0/1:17,2:18:14.47:36,0,14	1/1:20,0:20:2.05:132,2,0	0/1:8,0:6:11.14:11,0,50
chr10	18898115	.	T	TG	875.20	PASS	AB=0.861;AC=13;AF=0.232;AN=56;BaseQRankSum=-0.155;DP=518;FS=5.117;HRun=0;HaplotypeScore=259.1239;InbreedingCoeff=-0.0860;MQ=25.80;MQ0=36;MQRankSum=1.561;QD=4.71;ReadPosRankSum=-4.586;VQSLOD=2.0669;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:17:29.82:0,30,161	0/0:15,0:15:22.05:0,22,238	0/1:33,0:4:0.80:1,0,37	0/0:77,0:6:10.15:0,10,72	0/0:17,0:15:28.30:0,28,263	0/1:7,2:8:18.75:90,0,19	0/1:3,3:5:11.70:59,0,12	0/0:18,0:14:26.82:0,27,275	0/0:8,0:7:9.89:0,10,48	0/0:28,0:28:37.66:0,38,425	0/0:17,0:16:27.41:0,27,212	1/1:7,3:9:8.51:108,9,0	0/0:19,0:18:43.26:0,43,345	0/0:15,0:14:29.85:0,30,245	0/1:17,3:21:82.86:129,0,83	0/0:17,0:17:23.74:0,24,232	0/0:13,0:13:11.81:0,12,150	0/0:18,0:18:17.79:0,18,142	0/1:17,2:14:42.55:43,0,235	0/1:11,2:13:9.12:81,0,9	0/1:10,0:5:0.44:0,0,47	0/1:9,1:10:42.98:97,0,43	0/1:14,5:18:32.39:194,0,32	0/1:14,4:17:62.58:86,0,63	0/1:14,3:17:42.20:134,0,42	0/0:22,0:21:32.07:0,32,260	0/0:23,0:23:0.22:0,0,187	0/0:8,0:6:16.74:0,17,102
chr10	18898118	.	TG	T	1656.64	PASS	AB=0.949;AC=37;AF=0.661;AN=56;BaseQRankSum=1.791;DP=510;FS=4.724;HRun=1;HaplotypeScore=247.7116;InbreedingCoeff=-0.1072;MQ=25.76;MQ0=37;MQRankSum=0.321;QD=4.12;ReadPosRankSum=0.177;VQSLOD=-0.0974;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:16,1:17:7.48:124,7,0	0/1:15,0:15:22.10:22,0,103	0/1:36,1:4:1.30:1,0,33	0/0:73,1:7:5.84:0,6,27	0/1:15,2:15:45.25:45,0,58	1/1:9,0:8:12.04:52,12,0	1/1:6,0:5:9.81:38,10,0	0/0:18,0:14:26.91:0,27,255	0/1:7,0:6:10.08:20,0,10	0/1:24,4:28:22.57:174,0,23	0/1:15,1:15:49.99:50,0,54	1/1:9,1:9:17.35:72,17,0	0/1:18,1:18:56.81:99,0,57	0/1:14,1:14:49.10:49,0,79	1/1:21,0:21:26.53:170,27,0	0/1:16,0:16:11.18:11,0,105	0/1:10,3:13:18.03:125,0,18	0/1:18,0:17:35.33:40,0,35	0/0:16,0:11:5.39:0,5,148	1/1:12,0:12:17.50:94,17,0	1/1:8,1:5:3.35:21,3,0	1/1:10,0:10:2.60:42,3,0	1/1:18,1:18:7.52:68,8,0	1/1:16,1:16:0.03:61,0,0	1/1:17,0:17:26.78:139,27,0	0/1:21,1:21:94.59:111,0,95	1/1:21,2:23:26.97:179,27,0	0/1:8,0:6:14.65:15,0,27
chr10	18898123	.	TTG	T	796.06	PASS	AB=0.970;AC=23;AF=0.411;AN=56;BaseQRankSum=3.953;DP=528;FS=16.260;HRun=0;HaplotypeScore=260.8882;InbreedingCoeff=-0.4275;MQ=25.82;MQ0=39;MQRankSum=-0.458;QD=2.31;ReadPosRankSum=1.732;VQSLOD=0.9762;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:19,0:19:28.36:28,0,115	0/1:16,0:16:35.74:36,0,69	0/0:43,0:4:4.77:0,5,29	0/0:74,0:7:15.67:0,16,95	0/1:18,0:16:38:58,0,38	0/1:10,1:10:21.67:22,0,70	0/0:8,0:7:3.78:0,4,60	0/0:16,0:12:17.48:0,17,107	0/1:9,0:8:8.88:9,0,99	0/1:29,0:29:99:145,0,110	0/1:18,0:17:56.91:75,0,57	1/1:9,0:8:2.28:40,2,0	0/1:19,0:18:10.77:11,0,189	0/1:15,0:14:31.44:31,0,67	0/1:20,1:21:43.69:44,0,74	0/1:16,0:16:7.76:8,0,51	0/0:14,0:14:6.68:0,7,89	1/1:19,0:18:1.31:53,1,0	0/0:13,0:9:6.92:0,7,98	0/1:15,0:14:31.26:31,0,54	0/1:11,0:6:3.04:3,0,36	0/1:9,3:12:41.77:42,0,106	0/1:15,4:18:42.31:71,0,42	0/0:16,0:15:8.30:0,8,76	0/1:15,1:16:17.41:17,0,101	0/1:21,0:20:7.25:7,0,81	0/1:23,0:23:2.40:214,0,2	0/1:8,0:6:0.24:0,0,74
chr10	18898124	.	TG	T	1369.74	PASS	AB=0.996;AC=21;AF=0.375;AN=56;BaseQRankSum=2.338;DP=509;FS=7.825;HRun=1;HaplotypeScore=240.9932;InbreedingCoeff=-0.4245;MQ=25.98;MQ0=40;MQRankSum=0.773;QD=3.52;ReadPosRankSum=4.588;VQSLOD=-0.0618;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:17,0:17:31.48:31,0,79	0/1:15,1:16:41.60:89,0,42	0/0:39,0:4:4.20:0,4,25	0/1:72,2:7:3.47:3,0,44	0/1:17,0:16:10.68:151,0,11	0/1:10,0:9:17.34:17,0,65	0/0:8,0:7:5.28:0,5,52	0/0:11,0:8:17.58:0,18,108	0/1:9,0:8:3.44:3,0,70	0/1:29,0:29:60.56:235,0,61	0/1:17,0:17:25.62:151,0,26	0/1:9,0:8:1.63:26,0,2	0/1:19,0:18:73.34:73,0,125	0/1:15,0:14:28.57:100,0,29	0/1:20,0:20:39.36:39,0,68	0/1:16,0:16:24.43:24,0,25	0/0:16,0:16:0.97:0,1,80	0/1:19,0:18:2.81:54,0,3	0/0:12,0:9:14.33:0,14,109	0/1:15,0:14:30.84:54,0,31	0/0:11,0:6:5.22:0,5,34	0/1:10,0:10:13.03:13,0,95	0/1:17,0:16:29.13:29,0,37	0/0:13,0:12:6.05:0,6,63	0/1:14,0:14:26.59:27,0,66	0/1:22,0:21:51.01:51,0,54	1/1:19,4:23:28.79:347,29,0	0/0:9,0:6:1.68:0,2,52
chr10	18898140	.	G	GT	779.56	PASS	AB=0.991;AC=26;AF=0.464;AN=56;BaseQRankSum=1.933;DP=512;FS=0.498;HRun=14;HaplotypeScore=204.6039;InbreedingCoeff=0.7638;MQ=38.87;MQ0=41;MQRankSum=0.397;QD=2.90;ReadPosRankSum=3.085;VQSLOD=0.1999;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:13.35:0,13,131	1/1:11,0:11:19:85,19,0	0/1:52,1:9:15.80:16,0,46	0/0:83,0:15:15.29:0,15,104	1/1:12,0:14:11.36:44,11,0	0/0:11,0:10:23.88:0,24,179	0/0:11,0:10:26.86:0,27,204	0/0:7,0:5:11.95:0,12,92	0/0:11,0:10:17.51:0,18,123	1/1:25,0:28:13.78:146,14,0	1/1:17,0:16:5.83:82,6,0	0/0:12,0:11:18.25:0,18,175	1/1:16,0:20:28.31:124,28,0	1/1:11,0:11:7.56:53,8,0	0/0:17,0:19:45.08:0,45,327	1/1:15,2:16:14.48:81,14,0	1/1:15,0:16:17.40:90,17,0	1/1:7,14:21:2.28:10,2,0	0/0:12,0:6:11.78:0,12,88	0/0:19,0:18:38.74:0,39,294	0/1:8,0:4:14.27:14,0,36	0/0:11,0:11:13.74:0,14,131	0/0:11,0:10:11.49:0,11,79	0/0:10,0:10:17.52:0,18,123	0/0:13,0:12:29.84:0,30,224	1/1:11,0:14:21.47:102,21,0	1/1:22,0:24:17.96:95,18,0	1/1:7,0:5:11.08:50,11,0
chr10	18898150	.	GGTTTTTT	G	3958.59	PASS	AB=0.977;AC=32;AF=0.571;AN=56;BaseQRankSum=-4.959;DP=443;FS=20.095;HRun=0;HaplotypeScore=181.6359;InbreedingCoeff=-0.2863;MQ=46.76;MQ0=23;MQRankSum=-1.104;QD=13.02;ReadPosRankSum=-3.194;VQSLOD=0.6030;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:11,0:11:8.54:150,0,9	0/1:7,0:7:13.45:68,0,13	0/0:53,0:11:16.83:0,17,190	0/0:70,0:14:25.08:0,25,243	1/1:7,4:11:18.55:189,19,0	0/1:9,0:9:4.90:105,0,5	0/1:10,0:10:10.57:138,0,11	1/1:6,0:6:17.46:180,17,0	0/1:9,0:9:26.50:99,0,27	0/1:23,2:25:21.11:358,0,21	1/1:12,0:11:6.18:164,6,0	1/1:11,0:10:29.01:255,29,0	0/1:13,4:17:31.68:285,0,32	0/1:8,0:8:29.26:29,0,113	0/1:19,0:19:0.81:206,0,1	0/0:16,0:15:6.76:0,7,311	0/1:13,0:13:19:80,0,19	0/1:22,0:20:6.89:7,0,97	0/1:11,0:6:16.62:76,0,17	1/1:20,0:19:14.13:287,14,0	0/1:6,0:3:5.03:34,0,5	0/1:12,0:12:34.86:205,0,35	1/1:7,0:7:0.83:146,1,0	0/1:11,0:11:22.45:62,0,22	0/1:14,0:13:37.45:108,0,37	1/1:7,3:10:14.63:344,15,0	0/1:14,3:16:54.04:338,0,54	0/1:6,0:5:31.67:47,0,32
chr10	18898157	.	T	TTG	8522.33	PASS	AB=0.857;AC=48;AF=0.857;AN=56;BaseQRankSum=-1.305;DP=472;FS=13.683;HRun=0;HaplotypeScore=141.8268;InbreedingCoeff=0.6109;MQ=54.54;MQ0=21;MQRankSum=-4.136;QD=23.74;ReadPosRankSum=6.402;VQSLOD=4.4190;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,0:15:23.88:189,24,0	1/1:1,1:8:1.17:150,1,0	0/0:42,0:13:20.14:0,20,143	0/0:52,0:15:15.61:0,16,156	1/1:5,0:15:28.89:255,29,0	1/1:0,12:12:27.09:435,27,0	1/1:0,14:14:30.10:479,30,0	1/1:1,11:12:32.95:414,33,0	1/1:2,0:11:20.65:147,21,0	1/1:6,2:25:41.15:582,41,0	1/1:3,1:11:32.85:312,33,0	1/1:1,12:12:30.10:481,30,0	1/1:6,2:20:33.91:394,34,0	0/1:6,0:10:31.82:50,0,32	1/1:2,20:22:43.15:806,43,0	0/0:18,0:17:27.09:0,27,222	1/1:2,0:14:27.04:279,27,0	0/1:22,0:20:6.60:7,0,56	1/1:6,8:10:24.01:319,24,0	1/1:2,20:22:48.14:768,48,0	1/1:3,4:5:5.97:96,6,0	1/1:0,14:15:36.04:530,36,0	1/1:0,6:8:21.07:334,21,0	1/1:0,13:13:18.04:275,18,0	1/1:2,13:14:33.11:528,33,0	1/1:5,0:12:35.60:322,36,0	1/1:9,0:19:1.46:253,1,0	1/1:2,0:6:12.02:116,12,0
chr10	18898646	.	CTCTCTCTCTCTCTCTCTCTCAT	C	467.18	PASS	AB=1.000;AC=7;AF=0.152;AN=46;BaseQRankSum=1.586;DP=619;FS=1.197;HRun=0;HaplotypeScore=297.0130;InbreedingCoeff=0.6881;MQ=63.76;MQ0=11;MQRankSum=-1.333;QD=6.58;ReadPosRankSum=-2.590;VQSLOD=1.7231;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:23:11.96:0,12,516	0/0:14,0:14:9.50:0,9,449	0/0:56,0:21:17.34:0,17,284	0/0:87,0:38:42.40:0,42,562	0/0:24,0:24:31.56:0,32,1646	1/1:20,0:19:8.10:173,8,0	./.	1/1:16,7:23:21.07:291,21,0	0/0:23,0:19:15.05:0,15,698	0/0:19,0:18:42.14:0,42,2148	0/0:23,0:22:3.01:0,3,233	0/1:11,0:11:0:0,0,0	0/0:21,0:20:21.05:0,21,1308	0/0:19,0:19:27.07:0,27,856	1/1:17,0:17:5.50:123,5,0	0/0:36,0:36:36.19:0,36,2602	0/0:16,0:16:20.41:0,20,604	0/0:20,0:20:24.04:0,24,1360	./.	0/0:11,0:11:0.47:0,0,1	0/0:7,0:6:2.80:0,3,13	./.	0/0:7,0:7:2.13:0,2,4	./.	./.	0/0:28,0:27:51.57:0,52,2391	0/0:18,0:18:19.51:0,20,1143	0/0:13,0:13:13.60:0,14,701
chr10	18898648	.	CTCTCTCTCTCTCTCTCTCAT	C	360.32	PASS	AB=0.982;AC=12;AF=0.261;AN=46;BaseQRankSum=0.460;DP=627;FS=0.000;HRun=0;HaplotypeScore=278.7754;InbreedingCoeff=0.4566;MQ=62.11;MQ0=14;MQRankSum=-1.226;QD=2.50;ReadPosRankSum=-3.660;VQSLOD=1.8362;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:22:11.90:0,12,444	0/0:14,0:14:7.76:0,8,371	0/0:58,0:21:18.63:0,19,377	0/0:87,0:35:21.95:0,22,494	0/0:27,0:26:8.82:0,9,1368	1/1:18,2:19:8.65:163,9,0	./.	1/1:23,0:23:20.89:218,21,0	0/0:23,0:19:14.80:0,15,662	0/0:22,0:21:40.56:0,41,1809	0/0:23,0:22:3.01:0,3,206	0/1:12,1:13:0:0,0,0	0/0:22,0:21:18.53:0,19,1122	0/0:19,0:19:23.40:0,23,652	1/1:15,1:16:2.88:74,3,0	0/1:37,0:37:4.50:5,0,2197	0/1:17,0:17:16.86:17,0,467	0/0:20,0:20:24.03:0,24,1251	./.	1/1:12,0:12:2.80:13,3,0	0/0:6,0:5:2.80:0,3,13	./.	0/1:6,0:6:1.16:1,0,4	./.	./.	0/0:31,0:29:10.63:0,11,1949	0/0:18,0:18:1.47:0,1,958	0/0:13,0:13:13.92:0,14,610
chr10	18898654	.	CTCTCTCTCTCTCAT	C	733.20	PASS	AB=1.000;AC=20;AF=0.417;AN=48;BaseQRankSum=-1.496;DP=654;FS=6.515;HRun=0;HaplotypeScore=231.9720;InbreedingCoeff=-0.0650;MQ=57.05;MQ0=23;MQRankSum=-1.190;QD=2.00;ReadPosRankSum=-4.690;VQSLOD=0.6859;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:21:33.35:33,0,254	0/0:13,0:13:5.13:0,5,201	0/0:61,0:16:23.42:0,23,379	0/1:92,0:32:30.82:31,0,329	0/1:28,0:27:37.32:37,0,689	1/1:23,0:22:9.03:195,9,0	1/1:17,0:15:0.82:18,1,0	0/0:20,0:20:5.16:0,5,66	0/1:22,0:18:7.95:8,0,323	0/0:25,0:23:45.34:0,45,836	0/0:22,0:21:3.01:0,3,127	0/1:15,0:15:0:0,0,0	0/0:23,0:22:17.15:0,17,665	0/1:19,0:19:99:152,0,296	1/1:18,0:18:2.86:26,3,0	0/0:36,0:36:9.07:0,9,1634	0/1:18,0:18:99:115,0,213	0/1:20,0:19:15.46:15,0,864	./.	1/1:12,0:12:2.99:24,3,0	0/0:8,0:7:2.04:0,2,6	./.	1/1:8,0:8:2.94:27,3,0	./.	./.	0/1:32,0:30:91.89:92,0,895	0/1:19,0:19:98.48:98,0,549	0/0:14,0:13:0.59:0,1,315
chr10	18898658	.	CTCTCTCTCAT	C	1403.36	PASS	AB=0.976;AC=26;AF=0.520;AN=50;BaseQRankSum=-3.392;DP=650;FS=18.330;HRun=0;HaplotypeScore=201.3942;InbreedingCoeff=-0.3476;MQ=54.73;MQ0=26;MQRankSum=-0.930;QD=2.88;ReadPosRankSum=-5.296;VQSLOD=-0.1543;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:21:56.73:57,0,130	0/0:12,0:12:3.25:0,3,111	0/0:68,0:16:23.28:0,23,340	0/1:88,0:28:27.17:27,0,285	0/1:27,0:26:66.49:66,0,280	1/1:23,0:22:9.03:230,9,0	1/1:15,0:13:1.42:19,1,0	0/1:19,0:19:24.11:24,0,69	0/1:20,0:16:99:111,0,195	0/1:26,0:23:99:123,0,248	0/0:22,0:21:3.01:0,3,75	0/1:9,5:14:0:0,0,0	0/1:22,0:21:15.56:16,0,337	0/1:21,0:21:99:152,0,155	1/1:18,0:18:2.82:25,3,0	0/1:35,0:35:3.33:3,0,1232	0/1:17,0:17:77.52:179,0,78	0/1:20,0:19:16.02:16,0,636	0/1:7,1:5:0:0,0,0	1/1:10,1:11:3.01:58,3,0	0/0:9,0:8:1.55:0,2,4	./.	1/1:9,2:10:2.87:28,3,0	./.	./.	0/1:29,0:27:99:273,0,352	0/1:20,0:20:99:99,0,282	0/1:16,0:15:31.65:32,0,169
chr10	18898662	.	CTCTCAT	C	2481.61	PASS	AB=0.996;AC=31;AF=0.646;AN=48;BaseQRankSum=-3.258;DP=634;FS=18.312;HRun=0;HaplotypeScore=175.2123;InbreedingCoeff=-0.1699;MQ=52.43;MQ0=25;MQRankSum=-0.916;QD=5.25;ReadPosRankSum=-2.684;VQSLOD=0.9576;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:21,1:19:32.01:79,0,32	0/1:10,0:10:10.87:15,0,11	0/0:68,0:13:22.69:0,23,263	0/1:88,0:27:27.04:27,0,301	1/1:27,0:26:0.46:203,0,0	1/1:12,9:20:9.03:140,9,0	1/1:14,0:12:2.71:21,3,0	1/1:15,0:15:4.65:46,5,0	0/1:22,0:18:44.20:111,0,44	1/1:27,0:24:39.33:593,39,0	0/0:21,0:20:2.98:0,3,21	./.	0/1:22,0:21:40.27:87,0,40	0/1:21,0:21:2.60:209,0,3	1/1:15,2:17:1.65:22,2,0	0/1:33,0:33:2.81:3,0,854	1/1:18,0:18:27.02:310,27,0	0/1:20,0:19:16.03:16,0,428	1/1:10,0:8:0.80:3,1,0	1/1:7,4:11:3.01:68,3,0	0/0:8,0:7:1.55:0,2,4	./.	1/1:12,0:11:2.90:32,3,0	./.	./.	0/1:27,0:25:11.51:482,0,12	0/1:20,0:20:21.60:118,0,22	0/1:15,0:14:26.96:34,0,27
chr10	18898664	.	CTCAT	C	3611.73	PASS	AB=1.000;AC=41;AF=0.854;AN=48;BaseQRankSum=-1.704;DP=614;FS=0.000;HRun=0;HaplotypeScore=159.9349;InbreedingCoeff=0.2805;MQ=51.57;MQ0=26;MQRankSum=0.025;QD=7.56;ReadPosRankSum=2.147;VQSLOD=2.3617;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:19:7.89:95,8,0	1/1:10,0:10:10.54:83,11,0	0/0:67,0:13:22.67:0,23,245	0/1:85,0:26:27.77:28,0,292	1/1:26,1:26:28.11:347,28,0	1/1:21,0:20:9.03:104,9,0	1/1:11,0:9:2.81:21,3,0	1/1:13,0:13:5.05:47,5,0	1/1:22,0:18:10.92:134,11,0	1/1:25,2:24:58.76:777,59,0	1/1:20,0:19:1.46:5,1,0	./.	1/1:22,0:21:18.51:178,19,0	1/1:20,0:20:24.87:287,25,0	1/1:16,1:17:1.76:23,2,0	0/1:32,0:32:2.18:2,0,606	1/1:18,0:18:30.82:377,31,0	0/1:20,0:19:16.04:16,0,313	1/1:9,0:7:0.80:3,1,0	1/1:11,0:11:3.01:36,3,0	0/0:8,0:7:1.55:0,2,4	./.	1/1:12,0:11:2.63:34,3,0	./.	./.	1/1:26,0:24:63.55:708,64,0	1/1:19,0:19:22.83:234,23,0	1/1:14,0:13:10.64:72,11,0
chr10	18898666	.	CAT	C	4703.52	PASS	AB=0.964;AC=41;AF=0.854;AN=48;BaseQRankSum=-3.041;DP=557;FS=0.689;HRun=0;HaplotypeScore=134.3337;InbreedingCoeff=0.2895;MQ=51.93;MQ0=26;MQRankSum=-0.173;QD=10.57;ReadPosRankSum=2.218;VQSLOD=4.8274;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:14,6:19:10.52:140,11,0	1/1:0,10:10:12.51:154,13,0	0/0:63,1:11:22.04:0,22,217	0/1:77,6:26:25.60:26,0,315	1/1:11,16:26:29.68:451,30,0	1/1:14,1:14:8.96:89,9,0	1/1:8,0:6:3.70:23,4,0	1/1:7,1:8:5.05:47,5,0	1/1:9,12:18:17.92:201,18,0	1/1:4,22:23:60.56:817,61,0	1/1:0,20:19:2.70:49,3,0	./.	1/1:2,18:19:24.04:343,24,0	1/1:7,13:20:27.09:408,27,0	1/1:8,4:12:2.92:25,3,0	0/1:30,1:31:1.77:2,0,413	1/1:10,7:17:31.30:381,31,0	0/1:21,0:20:17.23:17,0,194	1/1:6,0:4:0.80:3,1,0	1/1:6,1:7:3.01:32,3,0	0/0:5,2:6:1.55:0,2,4	./.	1/1:6,5:10:2.62:34,3,0	./.	./.	1/1:0,25:23:66.20:935,66,0	1/1:8,11:19:24.08:349,24,0	1/1:0,14:13:13.86:180,14,0
chr10	18898668	.	T	TTC	730.05	PASS	AB=0.936;AC=19;AF=0.396;AN=48;BaseQRankSum=-2.037;DP=573;FS=12.402;HRun=0;HaplotypeScore=158.4250;InbreedingCoeff=0.2649;MQ=50.12;MQ0=27;MQRankSum=-1.270;QD=3.49;ReadPosRankSum=-3.164;VQSLOD=1.2317;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:19:5.88:46,6,0	0/1:12,0:12:16.42:27,0,16	0/0:64,0:11:11.35:0,11,69	0/0:82,0:24:5.23:0,5,77	0/0:28,0:27:12.47:0,12,51	0/0:15,0:14:5.33:0,5,25	1/1:9,0:6:3.35:16,3,0	0/1:9,0:9:0.55:23,0,1	1/1:23,0:19:6.23:27,6,0	0/1:29,0:25:19.69:20,0,80	0/0:20,0:19:2.46:0,2,9	1/1:9,0:9:3:26,3,0	0/0:20,0:19:14.37:0,14,56	0/0:22,0:22:7.05:0,7,43	./.	0/1:6,25:31:19.28:476,0,19	0/1:16,0:16:0.87:1,0,23	1/1:5,16:20:12.04:192,12,0	0/1:8,0:6:12.18:12,0,17	0/0:7,0:7:1.55:0,2,4	0/1:7,0:6:0:0,0,0	./.	1/1:12,0:11:2.04:6,2,0	./.	./.	0/0:25,0:23:19.02:0,19,63	0/0:18,0:18:9.97:0,10,36	0/0:14,0:13:4.50:0,4,18
chr10	18898706	.	GTC	G	1972.98	PASS	AB=1.000;AC=44;AF=0.786;AN=56;BaseQRankSum=5.325;DP=540;FS=0.664;HRun=0;HaplotypeScore=165.0410;InbreedingCoeff=0.2427;MQ=40.03;MQ0=24;MQRankSum=0.714;QD=3.99;ReadPosRankSum=-4.202;VQSLOD=1.9589;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:20,3:21:2.84:17,3,0	1/1:9,0:9:8.62:49,9,0	0/0:10,0:2:3:0,3,29	0/0:23,0:5:9.43:0,9,78	1/1:24,1:24:4.70:23,5,0	1/1:26,0:23:19.93:143,20,0	1/1:18,0:15:4.88:41,5,0	0/1:27,0:18:57.82:58,0,71	1/1:20,6:22:37.74:388,38,0	0/1:20,0:17:2.04:50,0,2	1/1:17,0:16:4.18:25,4,0	1/1:18,0:18:21.31:152,21,0	1/1:24,0:23:17.77:174,18,0	1/1:23,1:24:11.59:63,12,0	1/1:27,0:26:20.11:154,20,0	0/1:29,0:28:39.60:40,0,566	1/1:15,1:16:8.08:64,8,0	0/1:18,0:17:14.27:14,0,327	0/1:18,0:14:5.96:6,0,26	0/0:10,0:9:3.79:0,4,18	1/1:12,0:11:12.43:91,12,0	1/1:15,0:14:8.81:59,9,0	0/1:14,0:12:0.59:3,0,1	1/1:24,0:24:11.53:75,12,0	1/1:19,0:17:5.91:45,6,0	1/1:17,2:17:29.08:219,29,0	1/1:17,1:18:19.82:127,20,0	1/1:9,0:6:7.77:36,8,0
chr10	18898722	.	GTCTC	G	5373.92	PASS	AB=0.559;AC=47;AF=0.839;AN=56;BaseQRankSum=2.506;DP=539;FS=3.075;HRun=0;HaplotypeScore=148.6138;InbreedingCoeff=0.5759;MQ=45.49;MQ0=23;MQRankSum=1.282;QD=12.10;ReadPosRankSum=-1.736;VQSLOD=3.9166;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,14:21:2.93:35,3,0	1/1:7,1:8:14.91:154,15,0	0/0:19,0:6:7.97:0,8,117	0/0:31,0:8:1.04:0,1,97	1/1:8,14:21:2.59:17,3,0	1/1:22,0:19:29.18:346,29,0	1/1:17,0:15:10.79:141,11,0	1/1:35,0:25:56.86:537,57,0	1/1:27,1:26:55.93:578,56,0	1/1:18,1:16:26.90:246,27,0	1/1:14,1:14:14.90:145,15,0	1/1:18,0:18:30.40:388,30,0	1/1:15,4:18:35.88:427,36,0	1/1:6,20:26:8.89:102,9,0	1/1:29,0:28:41.90:531,42,0	0/0:28,0:27:60.14:0,60,1019	0/1:4,15:19:6.22:78,0,6	0/0:17,0:16:32.10:0,32,551	1/1:13,0:8:6.94:41,7,0	1/1:11,0:11:5.96:112,6,0	1/1:10,0:9:11.85:210,12,0	1/1:14,0:13:15.45:183,15,0	1/1:12,0:11:6.64:75,7,0	1/1:26,0:26:21.28:232,21,0	1/1:17,0:15:4.28:142,4,0	1/1:12,2:12:32.98:424,33,0	1/1:6,15:21:15.01:194,15,0	1/1:7,1:5:2.99:38,3,0
chr10	18900116	.	AGGAAGGGAGAGGGAGAAAGGGAAGGG	A	4546.47	PASS	AB=0.770;AC=41;AF=0.788;AN=52;BaseQRankSum=3.105;DP=450;FS=32.476;HRun=0;HaplotypeScore=232.2914;InbreedingCoeff=0.3321;MQ=81.31;MQ0=6;MQRankSum=-5.399;QD=17.42;ReadPosRankSum=4.513;VQSLOD=2.5218;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:20,18:38:2.86:329,3,0	1/1:3,2:5:3.01:174,3,0	0/0:54,0:35:32.54:0,33,685	0/0:72,0:42:47.38:0,47,952	1/1:10,0:10:12.01:181,12,0	1/1:4,6:10:9.50:536,10,0	1/1:18,0:18:18:274,18,0	1/1:5,0:5:3.01:63,3,0	0/1:4,7:11:3.70:195,0,4	0/1:4,3:7:13.51:196,0,14	1/1:9,2:11:6.02:341,6,0	0/1:4,0:4:5.96:13,0,6	1/1:8,9:17:3.01:202,3,0	1/1:7,10:17:6.02:403,6,0	1/1:3,10:13:3.01:183,3,0	0/0:17,0:17:33.10:0,33,1988	1/1:17,0:17:5.99:78,6,0	0/0:20,0:20:36.12:0,36,2640	1/1:13,0:13:3.01:61,3,0	1/1:4,0:4:6.01:78,6,0	1/1:18,0:18:3.01:57,3,0	1/1:5,8:13:3.01:202,3,0	1/1:4,4:8:3.01:170,3,0	./.	./.	1/1:6,5:11:15.04:574,15,0	1/1:3,6:9:1.25:178,1,0	1/1:2,0:2:3.01:59,3,0
chr10	18900138	.	AAG	A	879.41	PASS	AB=0.829;AC=15;AF=0.268;AN=56;BaseQRankSum=5.330;DP=405;FS=22.027;HRun=0;HaplotypeScore=83.5401;InbreedingCoeff=-0.2662;MQ=79.92;MQ0=4;MQRankSum=-3.631;QD=6.33;ReadPosRankSum=2.458;VQSLOD=1.4887;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:23:35.78:36,0,153	0/0:4,0:4:8.87:0,9,66	0/0:73,1:40:37.38:0,37,1215	0/0:97,0:45:83.66:0,84,1375	0/1:6,2:8:26.64:27,0,187	0/0:6,0:6:7.04:0,7,32	0/1:8,5:13:99:161,0,326	0/0:3,0:3:9.02:0,9,103	0/1:8,0:8:6.41:6,0,11	0/0:6,0:6:2.06:0,2,99	0/0:3,0:3:8.91:0,9,81	0/1:2,2:4:39.59:40,0,65	0/1:12,0:12:0.82:1,0,63	0/1:12,0:12:13.69:14,0,73	0/0:10,0:10:2.04:0,2,6	0/0:16,0:16:48.16:0,48,960	0/1:6,7:13:99:253,0,283	0/0:20,0:20:60.19:0,60,1163	0/1:7,1:8:30.64:31,0,209	0/1:2,1:3:39.78:40,0,64	0/1:7,10:17:61.71:260,0,62	1/1:8,0:8:2.80:13,3,0	0/0:6,0:6:8.96:0,9,104	0/0:11,0:11:6.02:0,6,102	0/1:2,2:4:85.61:86,0,91	0/1:5,0:5:59.28:59,0,71	0/0:8,0:8:8.34:0,8,53	0/0:1,0:1:3.01:0,3,60
chr10	18900236	.	A	AAG	2266.39	PASS	AB=0.787;AC=22;AF=0.393;AN=56;BaseQRankSum=5.699;DP=389;FS=116.531;HRun=0;HaplotypeScore=95.7754;InbreedingCoeff=-0.5327;MQ=44.54;MQ0=26;MQRankSum=-4.074;QD=10.40;ReadPosRankSum=-2.423;VQSLOD=-0.0563;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:13,7:18:99:174,0,385	0/0:1,0:1:3.01:0,3,38	0/0:49,0:13:22.77:0,23,220	0/0:81,0:15:12.98:0,13,298	0/1:6,4:8:61.87:104,0,62	0/1:3,1:4:12.82:13,0,113	0/1:12,6:18:99:186,0,340	0/1:16,9:24:99:573,0,286	0/1:8,1:8:70.83:74,0,71	0/1:11,2:11:94.61:161,0,95	0/1:9,3:12:66.07:66,0,107	0/1:6,2:8:73.51:139,0,74	0/1:4,1:5:45.81:46,0,132	0/0:11,1:11:9.33:0,9,230	0/1:5,4:9:79.16:79,0,123	0/0:6,0:6:15.02:0,15,214	0/1:6,2:8:46.98:124,0,47	0/0:6,0:7:17.23:0,17,252	0/1:6,3:9:80.82:126,0,81	0/1:6,1:7:44.66:45,0,62	0/0:8,4:9:12.04:0,12,164	0/1:12,4:15:99:129,0,294	0/1:9,1:11:13.12:13,0,147	0/1:6,4:10:10.52:13,0,11	0/1:5,2:7:92.28:104,0,92	0/1:4,1:4:48.71:49,0,119	0/1:5,3:7:70.71:90,0,71	1/1:1,2:2:6.02:119,6,0
chr10	18900250	.	GA	G	557.15	PASS	AB=1.000;AC=25;AF=0.481;AN=52;BaseQRankSum=7.560;DP=272;FS=2.493;HRun=1;HaplotypeScore=71.9649;InbreedingCoeff=0.3482;MQ=34.59;MQ0=27;MQRankSum=-3.367;QD=5.21;ReadPosRankSum=-1.074;VQSLOD=0.1122;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,2:12:6.93:172,7,0	./.	0/0:35,0:6:7.87:0,8,85	0/0:57,0:9:18.04:0,18,216	1/1:8,0:7:1.31:4,1,0	1/1:2,1:2:5.98:53,6,0	0/1:14,0:13:78.74:79,0,93	0/0:17,0:16:1:0,1,314	1/1:6,0:5:8.95:81,9,0	0/1:9,0:7:10.21:10,0,131	0/0:5,0:5:0.25:0,0,1	0/1:6,0:5:1.54:62,0,2	0/0:4,0:4:5.97:0,6,57	./.	1/1:6,0:6:5.98:55,6,0	0/0:9,0:9:18.05:0,18,249	0/1:8,0:8:19.33:41,0,19	0/0:13,0:13:27.75:0,28,303	0/0:6,0:5:11.93:0,12,117	1/1:2,0:2:3.01:33,3,0	1/1:7,1:5:3.01:39,3,0	1/1:7,0:7:2.94:18,3,0	0/0:5,0:5:5.80:0,6,52	1/1:7,0:7:5.56:58,6,0	1/1:3,0:3:2.04:6,2,0	0/0:4,0:3:9.01:0,9,99	0/0:6,0:5:7.39:0,7,35	0/1:5,0:3:3.12:3,0,21
chr10	18901906	.	G	GTGATCCATAGAGATCTGTGT	55156.62	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=1.524;DP=843;FS=3.995;HRun=0;HaplotypeScore=399.8796;InbreedingCoeff=0.9628;MQ=60.29;MQ0=0;MQRankSum=-10.547;QD=73.44;ReadPosRankSum=-1.927;VQSLOD=3.3665;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:38,4:42:33.11:2762,33,0	1/1:7,1:9:15.05:1251,15,0	0/0:13,0:12:24.05:0,24,463	0/0:13,0:13:15.92:0,16,435	1/1:23,6:32:17.98:1145,18,0	1/1:17,5:24:30.03:1747,30,0	1/1:36,0:36:30.06:1477,30,0	1/1:52,0:52:99:5221,108,0	1/1:22,6:29:42.06:3051,42,0	1/1:26,2:32:51.16:2848,51,0	1/1:12,6:18:15.02:1140,15,0	1/1:30,4:35:30.10:2575,30,0	1/1:25,8:33:39.10:3116,39,0	1/1:26,3:31:18.06:1474,18,0	1/1:33,8:42:54.12:4281,54,0	0/0:35,0:35:78.25:0,78,3599	1/1:40,5:47:39.10:2652,39,0	0/0:31,0:31:57.20:0,57,2759	1/1:27,5:34:60.19:3183,60,0	1/1:30,4:34:45.02:3240,45,0	1/1:36,0:36:24.08:1565,24,0	1/1:22,3:27:15.01:1035,15,0	1/1:21,3:25:23.91:1199,24,0	1/1:22,1:23:21.07:1626,21,0	1/1:31,4:37:15.05:1159,15,0	1/1:22,3:29:63.20:3365,63,0	1/1:25,8:35:37.37:2923,37,0	1/1:4,4:8:12.04:1121,12,0
chr10	18904102	.	G	GTAT	2326.95	PASS	AB=0.571;AC=3;AF=0.054;AN=56;BaseQRankSum=10.969;DP=639;FS=1.795;HRun=0;HaplotypeScore=101.7969;InbreedingCoeff=0.8395;MQ=81.66;MQ0=1;MQRankSum=-10.747;QD=35.26;ReadPosRankSum=-0.542;VQSLOD=4.1622;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,33:42:96.27:1573,96,0	0/0:13,0:13:39.13:0,39,721	0/0:21,0:21:60.20:0,60,1025	0/0:23,0:23:69.13:0,69,1093	0/0:21,0:21:54.15:0,54,924	0/0:16,0:16:45.10:0,45,773	0/0:19,0:19:57.18:0,57,1014	0/0:25,0:25:72.22:0,72,1225	0/1:6,18:24:0.38:860,0,0	0/0:25,0:25:72.20:0,72,1297	0/0:11,0:11:33.10:0,33,580	0/0:23,0:23:69.20:0,69,1183	0/0:26,0:26:75.25:0,75,1367	0/0:30,0:30:90.26:0,90,1563	0/0:33,0:33:96.32:0,96,1746	0/0:12,0:12:36.10:0,36,600	0/0:24,0:24:69.22:0,69,1247	0/0:23,0:23:69.20:0,69,1204	0/0:13,0:13:39.08:0,39,632	0/0:18,0:18:51.14:0,51,852	0/0:51,0:50:99:0,147,2685	0/0:20,0:20:54.14:0,54,912	0/0:14,0:14:39.13:0,39,726	0/0:27,0:27:81.25:0,81,1434	0/0:33,0:33:99:0,99,1711	0/0:21,0:21:60.20:0,60,1090	0/0:21,0:21:54.19:0,54,1006	0/0:10,0:10:30.10:0,30,540
chr10	18904103	.	G	GAT	1802.63	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=11.586;DP=646;FS=2.449;HRun=0;HaplotypeScore=92.9713;InbreedingCoeff=0.9976;MQ=81.35;MQ0=1;MQRankSum=-11.445;QD=25.39;ReadPosRankSum=-0.123;VQSLOD=4.4396;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,33:45:75.57:1206,76,0	0/0:13,0:13:39.13:0,39,574	0/0:21,0:21:59.56:0,60,815	0/0:23,0:23:66.22:0,66,958	0/0:20,0:20:54.16:0,54,772	0/0:16,0:16:45.12:0,45,624	0/0:19,0:19:54.18:0,54,795	0/0:25,0:25:72.23:0,72,1040	1/1:9,17:26:22.21:718,22,0	0/0:25,0:25:72.24:0,72,1055	0/0:11,0:11:33.11:0,33,484	0/0:23,0:23:60.20:0,60,883	0/0:26,0:26:75.25:0,75,1102	0/0:30,0:30:87.29:0,87,1275	0/0:33,0:33:96.31:0,96,1395	0/0:13,0:13:30.10:0,30,441	0/0:24,0:24:69.22:0,69,995	0/0:23,0:23:69.20:0,69,983	0/0:14,0:14:36.10:0,36,493	0/0:18,0:18:45.14:0,45,643	0/0:51,0:50:99:0,147,2143	0/0:20,0:20:54.16:0,54,756	0/0:14,0:14:39.13:0,39,574	0/0:27,0:27:78.26:0,78,1146	0/0:33,0:33:87.29:0,87,1280	0/0:22,0:22:60.19:0,60,865	0/0:21,0:21:60.17:0,60,844	0/0:10,0:10:30.10:0,30,437
chr10	18904991	.	GT	G	4760.59	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=6.962;DP=518;FS=29.628;HRun=6;HaplotypeScore=73.1815;InbreedingCoeff=0.9982;MQ=92.18;MQ0=0;MQRankSum=-5.358;QD=28.85;ReadPosRankSum=1.861;VQSLOD=2.9712;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:84.26:0,84,1090	1/1:0,9:9:24.06:258,24,0	0/0:20,0:20:25.18:0,25,569	0/0:22,0:22:45.36:0,45,657	1/1:3,11:14:27.06:290,27,0	0/0:12,0:12:33.11:0,33,434	0/0:19,0:19:51.15:0,51,651	0/0:24,0:24:63.17:0,63,829	0/0:12,0:12:36.12:0,36,474	1/1:1,21:22:63.16:677,63,0	1/1:0,11:11:27.07:290,27,0	0/0:14,0:14:36.11:0,36,460	1/1:1,16:17:48.12:516,48,0	1/1:0,14:14:38.93:419,39,0	0/0:19,0:19:57.19:0,57,750	0/0:7,0:7:21.07:0,21,276	1/1:1,25:26:75.19:806,75,0	0/0:22,0:22:57.15:0,57,731	0/0:14,0:14:42.13:0,42,539	0/0:13,0:13:39.13:0,39,512	0/0:50,0:50:99:0,141,1840	0/0:11,0:11:30.10:0,30,393	0/0:10,0:10:27.08:0,27,342	0/0:32,0:32:93.29:0,93,1210	0/0:20,0:20:57.19:0,57,750	1/1:3,21:24:63.13:666,63,0	1/1:0,15:15:42.11:451,42,0	1/1:1,12:13:36.09:387,36,0
chr10	18906818	.	T	TAGGACTGGTAATGAC	83007.17	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=7.637;DP=769;FS=10.336;HRun=0;HaplotypeScore=346.8015;InbreedingCoeff=0.9936;MQ=79.24;MQ0=0;MQRankSum=-19.251;QD=143.12;ReadPosRankSum=1.080;VQSLOD=4.0469;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,144,5961	1/1:3,1:4:12.04:603,12,0	0/0:30,0:30:81.25:0,81,2992	0/0:29,0:29:51.57:0,52,2514	1/1:16,1:19:39.13:1576,39,0	1/1:13,4:19:42.14:2614,42,0	1/1:20,13:37:96.33:5986,96,0	1/1:40,0:39:99:5608,105,0	0/0:22,0:22:63.22:0,63,2582	1/1:23,10:35:90.31:5537,90,0	1/1:10,4:14:33.10:2003,33,0	1/1:17,12:30:78.22:4817,78,0	1/1:24,11:35:96.33:6373,96,0	1/1:14,14:30:78.27:5172,78,0	1/1:11,14:26:66.23:4560,66,0	0/0:27,0:27:81.27:0,81,3312	1/1:16,8:30:60.21:3803,60,0	0/0:31,0:31:93.24:0,93,3684	1/1:24,5:30:84.27:4139,84,0	1/1:15,6:21:54.19:2939,54,0	1/1:18,2:25:36.09:1867,36,0	1/1:17,4:21:48.16:2410,48,0	1/1:13,3:17:42.02:2277,42,0	1/1:19,5:28:39.13:1955,39,0	1/1:22,13:35:90.29:5498,90,0	1/1:22,8:33:90.29:5312,90,0	1/1:17,15:35:90.31:5853,90,0	1/1:7,6:16:33.11:2105,33,0
chr10	18907691	.	GGAA	G	1338.47	PASS	AB=0.958;AC=26;AF=0.464;AN=56;BaseQRankSum=-3.641;DP=375;FS=29.117;HRun=0;HaplotypeScore=145.0170;InbreedingCoeff=-0.2179;MQ=63.13;MQ0=13;MQRankSum=0.967;QD=5.38;ReadPosRankSum=-0.316;VQSLOD=0.9067;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:15:24.92:0,25,412	0/1:7,0:7:27.66:37,0,28	0/0:31,0:15:19.33:0,19,459	0/0:36,0:15:26.76:0,27,465	0/1:13,0:13:38:74,0,38	0/1:10,1:11:61.18:61,0,80	1/1:3,13:14:17.78:299,18,0	0/1:7,0:7:23.40:82,0,23	0/0:11,0:10:22.11:0,22,265	0/1:21,0:20:0.01:0,0,302	0/1:10,0:9:48.65:49,0,66	0/1:2,5:6:11.98:44,0,12	0/1:10,0:10:52.40:52,0,101	0/1:11,0:11:9.09:9,0,129	1/1:9,2:9:23.53:226,24,0	0/0:17,0:17:40.56:0,41,564	0/1:12,0:12:28.24:53,0,28	0/0:14,0:13:28.82:0,29,478	0/1:12,0:12:99:113,0,113	0/1:10,3:13:65.07:65,0,103	1/1:4,1:5:2.38:25,2,0	0/1:15,0:14:45.68:78,0,46	0/1:13,1:14:0.24:0,0,80	1/1:7,4:11:11.94:119,12,0	0/1:11,0:10:8.94:9,0,82	0/1:22,0:21:99:100,0,200	0/1:8,0:8:8.27:8,0,92	0/1:2,0:2:2.22:2,0,33
chr10	18907711	.	AGGGGG	A	1133.87	PASS	AB=0.984;AC=29;AF=0.518;AN=56;BaseQRankSum=7.110;DP=394;FS=5.229;HRun=5;HaplotypeScore=166.5305;InbreedingCoeff=-0.2033;MQ=47.62;MQ0=23;MQRankSum=-2.428;QD=3.87;ReadPosRankSum=3.388;VQSLOD=-0.3256;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:20,0:18:48.85:49,0,367	0/1:8,0:7:0.65:1,0,50	0/1:54,0:15:6.34:6,0,228	0/0:72,0:16:22.12:0,22,260	1/1:10,1:11:19.27:89,19,0	0/1:11,0:10:45.55:46,0,46	0/0:10,0:8:12.93:0,13,79	1/1:6,0:5:5.89:23,6,0	0/0:9,0:8:3.62:0,4,163	0/1:19,2:18:99:131,0,122	0/1:9,0:8:40.77:41,0,42	0/1:3,0:3:1.78:8,0,2	0/1:10,1:11:49.11:49,0,64	0/1:8,0:8:9.71:67,0,10	0/1:10,0:8:10.64:11,0,21	0/1:11,0:12:85.39:85,0,181	0/1:10,0:9:5.44:68,0,5	0/1:9,0:7:3.54:4,0,98	0/1:10,0:9:16.98:17,0,47	1/1:9,3:12:0.56:139,1,0	0/1:4,0:4:0:0,0,0	1/1:11,0:9:16.21:136,16,0	0/1:15,1:15:8.09:149,0,8	0/1:6,0:6:5.61:6,0,14	1/1:11,0:10:10.73:117,11,0	0/1:16,0:15:42.11:42,0,47	0/0:7,0:6:12.13:0,12,111	0/1:3,0:3:2.29:4,0,2
chr10	18907713	.	G	GA	1323	PASS	AB=0.887;AC=22;AF=0.407;AN=54;BaseQRankSum=5.564;DP=382;FS=37.418;HRun=0;HaplotypeScore=148.6246;InbreedingCoeff=-0.2266;MQ=43.84;MQ0=25;MQRankSum=-0.577;QD=6.42;ReadPosRankSum=1.490;VQSLOD=1.8819;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:20,0:18:10.61:11,0,320	0/1:6,2:7:16.78:67,0,17	0/0:55,0:14:3.59:0,4,270	0/0:76,0:15:6.66:0,7,196	1/1:8,3:11:5.36:110,5,0	0/1:9,2:10:19.50:74,0,19	0/1:5,0:3:6.80:7,0,26	0/0:6,0:5:4.49:0,4,39	0/0:8,0:7:11.22:0,11,127	0/1:17,3:17:45.12:135,0,45	0/1:7,2:8:4.95:123,0,5	0/1:2,0:2:5.10:5,0,9	0/1:9,0:9:26.82:27,0,33	0/1:7,0:7:7.31:7,0,28	0/0:9,0:7:3.17:0,3,58	0/1:11,1:12:4.06:4,0,183	0/1:10,0:9:10.76:25,0,11	0/0:7,0:5:14.89:0,15,161	0/1:9,0:8:9.56:10,0,51	1/1:7,5:11:21.21:213,21,0	./.	0/1:6,5:9:4.05:160,0,4	0/1:11,6:16:39.85:159,0,40	1/1:5,0:5:5.56:54,6,0	0/1:8,4:11:20.59:149,0,21	0/1:11,5:15:44.95:137,0,45	0/0:7,0:6:11.43:0,11,112	0/0:3,0:3:6.38:0,6,39
chr10	18907717	.	A	AG	2509.30	PASS	AB=0.941;AC=43;AF=0.796;AN=54;BaseQRankSum=3.855;DP=381;FS=16.172;HRun=5;HaplotypeScore=152.0295;InbreedingCoeff=0.1042;MQ=44.55;MQ0=25;MQRankSum=-1.464;QD=7.92;ReadPosRankSum=2.737;VQSLOD=0.1667;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:21,0:19:98.63:99,0,136	1/1:7,2:8:12.43:124,12,0	0/0:54,1:13:28.13:0,28,189	0/1:79,0:14:16.72:17,0,112	1/1:6,4:11:11.92:90,12,0	0/1:9,1:9:8.42:115,0,8	1/1:5,0:3:2.98:21,3,0	1/1:4,2:5:5.36:91,5,0	0/1:7,1:7:21.41:21,0,54	1/1:13,5:15:26.55:217,27,0	1/1:4,2:5:13.19:123,13,0	1/1:2,1:3:8.69:79,9,0	1/1:7,2:10:14.78:113,15,0	1/1:5,2:7:17.30:143,17,0	1/1:4,4:7:12.03:149,12,0	0/1:10,0:12:43.52:68,0,44	1/1:10,0:9:12.89:73,13,0	0/1:7,0:5:2.27:8,0,2	1/1:7,0:6:8.72:60,9,0	1/1:12,0:11:25.34:146,25,0	./.	1/1:12,1:10:16.09:119,16,0	1/1:12,3:14:25.32:191,25,0	0/0:4,0:5:1.82:0,2,5	1/1:9,3:12:27.25:246,27,0	1/1:12,2:13:20.88:192,21,0	0/1:5,2:6:7.79:66,0,8	1/1:0,2:2:6.02:82,6,0
chr10	18907718	.	GGGGAGGA	G	5138.02	PASS	AB=1.000;AC=45;AF=0.833;AN=54;BaseQRankSum=4.794;DP=378;FS=30.965;HRun=0;HaplotypeScore=155.7871;InbreedingCoeff=-0.2228;MQ=44.50;MQ0=25;MQRankSum=-0.982;QD=13.70;ReadPosRankSum=2.097;VQSLOD=1.9925;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:19,0:17:99:271,0,569	1/1:9,0:8:15.02:184,15,0	0/1:57,0:13:76.16:76,0,366	0/1:81,0:14:97.75:98,0,233	1/1:10,1:11:2.01:194,2,0	0/1:8,0:8:5.29:181,0,5	1/1:5,0:3:2.74:12,3,0	1/1:6,0:5:11.91:102,12,0	0/1:8,0:7:99:123,0,150	1/1:15,3:15:29.12:530,29,0	1/1:6,0:5:15.05:186,15,0	1/1:3,0:3:4.48:40,4,0	1/1:10,0:10:14.96:239,15,0	1/1:4,2:6:14.33:317,14,0	1/1:8,0:7:9.37:122,9,0	0/1:13,0:12:99:238,0,250	1/1:6,5:9:15.05:319,15,0	0/1:7,0:5:35.46:35,0,58	1/1:7,0:6:13.11:97,13,0	1/1:12,0:11:27.51:364,28,0	./.	1/1:13,0:10:23.37:302,23,0	1/1:14,0:13:22.80:250,23,0	1/1:5,0:5:2.84:33,3,0	1/1:12,0:12:29.90:418,30,0	1/1:13,1:13:22.28:306,22,0	0/1:8,0:6:34.38:39,0,34	0/1:2,0:2:2.48:62,0,2
chr10	18907719	.	G	GA	3616.40	PASS	AB=0.833;AC=45;AF=0.833;AN=54;BaseQRankSum=4.531;DP=364;FS=35.342;HRun=0;HaplotypeScore=142.0913;InbreedingCoeff=-0.1379;MQ=44.64;MQ0=26;MQRankSum=-2.335;QD=9.99;ReadPosRankSum=2.984;VQSLOD=2.2144;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:9,9:17:99:234,0,213	1/1:7,1:6:14.91:138,15,0	0/1:59,1:13:18.19:18,0,168	0/1:81,1:14:42.23:42,0,148	1/1:10,0:10:23.24:179,23,0	0/1:8,1:8:8.33:139,0,8	1/1:4,1:3:0.47:1,0,0	1/1:6,0:5:10.99:89,11,0	0/1:3,3:5:67.64:73,0,68	1/1:16,0:14:35.15:329,35,0	1/1:6,0:5:14.95:138,15,0	1/1:3,0:3:8.22:44,8,0	1/1:8,1:8:9.95:97,10,0	1/1:4,2:6:17.99:178,18,0	1/1:7,1:7:11.43:73,11,0	0/1:8,3:10:60.15:160,0,60	1/1:7,1:8:14.90:146,15,0	0/1:7,0:5:8.45:37,0,8	0/1:2,3:4:2.65:104,0,3	1/1:12,1:12:20.50:284,20,0	./.	1/1:10,2:9:22.94:210,23,0	1/1:13,1:13:21.91:243,22,0	1/1:3,0:3:1.90:6,2,0	1/1:9,1:11:26.94:298,27,0	1/1:12,0:11:23.92:245,24,0	0/1:7,1:6:17.69:72,0,18	1/1:2,0:2:5.93:40,6,0
chr10	18907723	.	GGA	G	1779.67	PASS	AB=0.988;AC=42;AF=0.778;AN=54;BaseQRankSum=7.484;DP=391;FS=27.564;HRun=0;HaplotypeScore=155.4875;InbreedingCoeff=0.1076;MQ=40.95;MQ0=33;MQRankSum=-1.597;QD=5.58;ReadPosRankSum=4.648;VQSLOD=1.6340;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:17,0:15:58.48:58,0,427	0/1:8,1:7:6.47:58,0,6	0/0:68,0:13:9.98:0,10,342	0/1:87,0:13:0.49:0,0,240	1/1:8,2:10:5.87:95,6,0	1/1:7,2:8:2.31:69,2,0	1/1:8,0:5:4.05:11,4,0	1/1:6,0:5:5.41:27,5,0	0/1:7,0:6:66.85:67,0,109	0/1:19,0:17:6.30:154,0,6	1/1:8,0:7:14.67:120,15,0	1/1:5,0:5:6.22:44,6,0	1/1:10,1:9:7.37:56,7,0	1/1:8,0:8:11.26:75,11,0	1/1:7,0:6:6.48:23,6,0	0/1:11,0:10:87.21:87,0,136	1/1:10,1:9:11.22:85,11,0	0/1:6,0:4:0.13:0,0,82	1/1:4,0:3:5.79:31,6,0	1/1:12,1:12:24.54:202,25,0	./.	1/1:12,1:10:17.43:160,17,0	1/1:14,0:13:23.40:185,23,0	1/1:3,0:3:3.01:37,3,0	1/1:13,0:12:25.98:169,26,0	1/1:12,0:11:11.46:92,11,0	0/1:8,0:6:5.29:15,0,5	0/0:2,0:2:0.69:0,1,3
chr10	18907726	.	GA	G	508.24	PASS	AB=0.974;AC=23;AF=0.426;AN=54;BaseQRankSum=4.594;DP=414;FS=4.692;HRun=1;HaplotypeScore=175.1878;InbreedingCoeff=0.0011;MQ=36.45;MQ0=32;MQRankSum=0.549;QD=2.55;ReadPosRankSum=4.672;VQSLOD=-0.0686;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,1:15:15.35:0,15,420	0/1:11,0:9:16.96:38,0,17	0/0:69,0:11:18.39:0,18,370	0/0:90,0:14:18.44:0,18,346	0/1:12,0:12:22.87:23,0,25	0/1:10,0:9:7.70:44,0,8	0/1:7,0:5:0.77:3,0,1	0/0:7,0:6:1.97:0,2,10	0/0:9,1:9:16.87:0,17,186	0/1:21,0:19:24.40:43,0,24	0/1:13,0:13:5.23:25,0,5	0/1:4,1:5:8.69:9,0,13	1/1:13,0:11:7.37:43,7,0	0/0:8,0:8:6.74:0,7,18	0/1:4,1:5:6.52:7,0,7	0/1:11,0:10:21.84:22,0,141	1/1:11,0:9:4.33:23,4,0	0/0:7,0:4:5.44:0,5,108	0/0:3,0:2:1.36:0,1,3	0/1:12,0:12:0.56:60,0,1	./.	0/1:14,0:12:2.94:69,0,3	1/1:14,0:13:2.89:79,3,0	1/1:3,0:3:0.94:1,1,0	0/1:16,0:15:36.86:73,0,37	1/1:12,0:12:2.41:82,2,0	0/1:7,0:5:7.13:10,0,7	0/0:2,0:2:5.27:0,5,21
chr10	18907730	.	AGAG	A	2441.49	PASS	AB=0.976;AC=40;AF=0.714;AN=56;BaseQRankSum=7.542;DP=423;FS=12.297;HRun=0;HaplotypeScore=172.4059;InbreedingCoeff=0.1927;MQ=34.19;MQ0=35;MQRankSum=-0.248;QD=9.73;ReadPosRankSum=5.799;VQSLOD=2.1653;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:17,0:15:25.95:26,0,587	0/1:11,1:10:7.69:92,0,8	0/0:69,0:13:34.67:0,35,448	0/0:91,0:14:16.51:0,17,342	1/1:12,1:13:15.03:120,15,0	0/1:10,0:9:0.20:90,0,0	1/1:7,0:5:6.57:32,7,0	1/1:8,0:6:14.46:94,14,0	0/1:9,0:9:15.11:15,0,215	0/1:20,1:19:5.84:278,0,6	1/1:14,0:13:9.54:141,10,0	1/1:6,0:6:0.77:45,1,0	0/1:12,1:11:16.59:65,0,17	1/1:7,0:7:14.26:79,14,0	1/1:5,0:5:11.13:62,11,0	0/1:10,0:9:99:140,0,180	1/1:9,1:9:11.55:82,12,0	0/0:9,0:4:11.69:0,12,158	1/1:1,1:1:3.01:50,3,0	1/1:9,3:11:25.27:216,25,0	0/0:1,0:2:2.88:0,3,15	1/1:15,0:12:14.60:192,15,0	1/1:14,1:14:35.52:272,36,0	1/1:3,0:3:3.78:11,4,0	1/1:17,0:16:2.45:199,2,0	1/1:12,1:13:19.94:218,20,0	0/1:9,0:7:3.86:58,0,4	1/1:2,0:2:4.55:28,5,0
chr10	18907732	.	AG	A	1800.66	PASS	AB=0.802;AC=33;AF=0.589;AN=56;BaseQRankSum=5.320;DP=418;FS=5.677;HRun=3;HaplotypeScore=168.1213;InbreedingCoeff=0.0683;MQ=34.23;MQ0=39;MQRankSum=-0.204;QD=7.57;ReadPosRankSum=5.452;VQSLOD=0.8045;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:12,2:12:5.67:6,0,367	0/1:8,4:10:43.90:54,0,44	0/0:67,0:13:30.34:0,30,318	0/0:89,1:14:29.04:0,29,288	1/1:12,1:13:11.69:90,12,0	0/1:6,3:9:26.78:98,0,27	1/1:6,1:5:8.05:44,8,0	1/1:4,1:3:4.48:50,4,0	0/0:8,1:9:16.77:0,17,175	0/1:13,9:19:44.97:190,0,45	1/1:9,6:14:5.28:179,5,0	1/1:6,1:6:3.54:40,4,0	0/1:11,2:11:39.51:48,0,40	0/1:7,1:7:3.54:6,0,4	1/1:5,0:5:5.33:41,5,0	0/1:7,4:10:75.61:76,0,110	1/1:9,1:8:1.95:31,2,0	0/0:10,0:4:5.54:0,6,124	0/0:1,1:1:2.04:0,2,6	1/1:6,6:11:21.89:176,22,0	0/0:2,0:2:2.88:0,3,15	1/1:10,5:12:9.23:139,9,0	1/1:6,9:14:23.01:237,23,0	1/1:1,2:3:5.05:39,5,0	0/1:11,6:16:14.91:180,0,15	0/1:6,7:13:13.84:176,0,14	0/1:8,1:7:24.28:62,0,24	0/1:2,0:2:2.53:5,0,3
chr10	18907738	.	GAGA	G	1624.39	PASS	AB=0.861;AC=22;AF=0.393;AN=56;BaseQRankSum=0.328;DP=474;FS=33.509;HRun=0;HaplotypeScore=205.3154;InbreedingCoeff=-0.3597;MQ=31.84;MQ0=41;MQRankSum=-1.279;QD=5.82;ReadPosRankSum=1.261;VQSLOD=1.4747;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:13:33.20:0,33,597	0/1:10,2:11:42.06:81,0,42	0/0:56,0:12:25.01:0,25,300	0/0:77,0:13:24.39:0,24,267	0/1:17,1:18:29.37:51,0,29	0/1:14,1:14:90.75:94,0,91	0/1:9,3:9:57.42:57,0,61	0/1:7,2:7:4.16:120,0,4	0/0:10,0:10:8.51:0,9,221	0/1:20,2:18:50.85:146,0,51	0/1:17,2:18:35.38:90,0,35	0/1:9,1:9:33:55,0,33	0/1:11,5:13:43.62:105,0,44	0/1:9,2:9:4.80:93,0,5	1/1:1,4:5:11.90:195,12,0	0/0:13,0:12:20.26:0,20,228	0/1:13,1:11:12.20:19,0,12	0/0:10,0:4:11.83:0,12,165	1/1:2,0:1:2.37:8,2,0	0/1:18,0:17:3.34:3,0,76	0/0:5,0:4:2.97:0,3,20	0/1:13,3:13:50.20:88,0,50	0/1:17,2:18:40.56:117,0,41	0/0:4,0:4:2.15:0,2,18	0/1:20,5:24:99:101,0,154	0/1:15,3:17:62.55:236,0,63	0/1:8,4:10:36.26:41,0,36	0/1:2,2:4:13.28:83,0,13
chr10	18909498	.	CATTTACCCG	C	5207.68	PASS	AB=0.815;AC=19;AF=0.339;AN=56;BaseQRankSum=17.190;DP=606;FS=5.685;HRun=0;HaplotypeScore=221.4604;InbreedingCoeff=0.9164;MQ=87.48;MQ0=0;MQRankSum=-16.496;QD=33.82;ReadPosRankSum=4.658;VQSLOD=4.1013;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,105,4773	1/1:6,1:7:20.75:183,21,0	0/0:22,0:22:60.21:0,60,2765	0/0:26,0:26:66.19:0,66,2805	1/1:11,2:13:14.63:378,15,0	0/0:12,0:12:36.12:0,36,1662	0/0:32,0:32:96.33:0,96,4505	0/0:21,0:21:51.18:0,51,2457	0/0:38,0:38:99:0,108,5121	1/1:15,2:17:39.09:558,39,0	1/1:7,4:11:30.04:572,30,0	0/0:21,0:21:63.22:0,63,3055	1/1:13,1:14:38.92:389,39,0	1/1:18,3:21:61.50:710,62,0	0/0:32,0:32:96.32:0,96,4432	0/0:27,0:26:81.26:0,81,3686	0/1:17,5:21:99:494,0,99	0/0:24,0:24:69.24:0,69,3304	0/0:17,0:17:45.15:0,45,2192	0/0:17,0:17:51.18:0,51,2273	0/0:38,0:38:99:0,111,5056	0/0:20,0:20:57.20:0,57,2585	0/0:10,0:10:30.10:0,30,1328	0/0:38,0:38:99:0,114,5526	0/0:21,0:21:63.22:0,63,3030	1/1:12,4:16:45.13:687,45,0	1/1:22,3:25:64.77:922,65,0	1/1:7,1:8:24.06:315,24,0
chr10	18909500	.	T	TGGAAG	9212.46	PASS	AB=0.583;AC=19;AF=0.339;AN=56;BaseQRankSum=16.880;DP=603;FS=6.402;HRun=0;HaplotypeScore=161.7054;InbreedingCoeff=0.9176;MQ=88.44;MQ0=0;MQRankSum=-16.788;QD=64.88;ReadPosRankSum=4.625;VQSLOD=5.6650;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,105,2242	1/1:1,6:7:21.07:491,21,0	0/0:21,0:21:63.22:0,63,1438	0/0:28,0:28:72.21:0,72,1529	1/1:2,8:10:15.98:357,16,0	0/0:13,0:13:36.12:0,36,839	0/0:33,0:33:99:0,99,2151	0/0:19,0:19:51.17:0,51,1146	0/0:36,0:36:99:0,108,2463	1/1:3,10:13:39.13:993,39,0	1/1:5,6:11:29.13:565,29,0	0/0:22,0:22:66.22:0,66,1472	1/1:1,12:13:38.34:940,38,0	1/1:4,17:21:63.22:1429,63,0	0/0:32,0:32:96.32:0,96,2174	0/0:27,0:26:81.26:0,81,1842	0/1:6,15:20:22.05:1037,0,22	0/0:24,0:24:72.20:0,72,1561	0/0:16,0:16:45.14:0,45,961	0/0:17,0:17:45.14:0,45,1003	0/0:40,0:40:99:0,108,2411	0/0:21,0:21:60.19:0,60,1335	0/0:10,0:10:27.09:0,27,611	0/0:39,0:39:99:0,117,2637	0/0:24,0:24:66.17:0,66,1360	1/1:4,11:15:45.15:1171,45,0	1/1:4,19:23:65.32:1553,65,0	1/1:1,7:8:24.08:675,24,0
chr10	18909503	.	ACCCGAT	A	6379.89	PASS	AB=0.583;AC=19;AF=0.339;AN=56;BaseQRankSum=17.235;DP=617;FS=7.148;HRun=0;HaplotypeScore=181.9869;InbreedingCoeff=0.9179;MQ=89.54;MQ0=0;MQRankSum=-16.974;QD=45.25;ReadPosRankSum=5.244;VQSLOD=4.2351;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,114,4150	1/1:1,6:7:18.06:318,18,0	0/0:23,0:23:69.20:0,69,2300	0/0:29,0:29:72.25:0,72,2477	1/1:2,8:10:23.95:277,24,0	0/0:14,0:14:42.14:0,42,1439	0/0:34,0:34:99:0,102,3737	0/0:22,0:22:60.21:0,60,2219	0/0:37,0:37:99:0,111,4018	1/1:2,10:12:36.12:703,36,0	1/1:4,6:11:24.07:344,24,0	0/0:24,0:24:72.25:0,72,2665	1/1:1,12:13:39.13:693,39,0	1/1:3,17:21:63.21:1013,63,0	0/0:32,0:32:96.33:0,96,3508	0/0:27,0:26:81.26:0,81,2836	0/1:6,15:20:67.97:697,0,68	0/0:25,0:25:75.24:0,75,2735	0/0:17,0:17:51.18:0,51,1926	0/0:17,0:17:51.16:0,51,1762	0/0:40,0:40:99:0,120,4462	0/0:22,0:22:63.20:0,63,2228	0/0:9,0:9:27.09:0,27,1015	0/0:41,0:41:99:0,123,4546	0/0:24,0:24:72.25:0,72,2697	1/1:4,11:15:42.61:785,43,0	1/1:3,19:23:67.43:1089,67,0	1/1:1,7:8:24.08:460,24,0
chr10	18909598	.	G	GGT	20729.52	PASS	AB=0.572;AC=42;AF=0.750;AN=56;BaseQRankSum=-3.768;DP=816;FS=3.014;HRun=0;HaplotypeScore=110.1432;InbreedingCoeff=0.8344;MQ=64.83;MQ0=6;MQRankSum=-0.454;QD=32.80;ReadPosRankSum=0.562;VQSLOD=6.7228;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,123,1478	1/1:1,12:14:36.12:559,36,0	0/0:26,0:21:35.91:0,36,382	0/0:18,0:12:17.77:0,18,179	1/1:5,24:29:38.48:1087,38,0	1/1:6,20:27:51.17:827,51,0	1/1:6,22:28:29.55:967,30,0	1/1:17,15:32:12.72:667,13,0	0/0:32,0:32:78.23:0,78,942	1/1:13,24:37:38.57:1105,39,0	1/1:6,20:27:14.50:742,14,0	1/1:7,21:27:63.21:1017,63,0	1/1:9,19:28:23.57:883,24,0	1/1:4,22:27:66.23:1069,66,0	1/1:4,21:26:60.20:974,60,0	0/0:30,0:30:81.25:0,81,990	1/1:4,27:31:49.36:1013,49,0	0/0:23,0:23:48.13:0,48,574	1/1:3,14:17:42.12:628,42,0	1/1:7,13:20:33.11:534,33,0	1/1:12,43:54:71.48:1609,71,0	1/1:2,25:29:72.25:1168,72,0	1/1:4,22:26:29.55:981,30,0	1/1:12,35:48:99:1655,102,0	1/1:4,15:20:30.10:487,30,0	1/1:6,31:38:59.65:1444,60,0	0/1:13,21:34:4.10:952,0,4	0/1:1,8:9:8.73:362,0,9
chr10	18909956	.	G	GGA	10737.59	PASS	AB=0.950;AC=21;AF=0.375;AN=56;BaseQRankSum=-13.695;DP=700;FS=1.321;HRun=0;HaplotypeScore=94.0926;InbreedingCoeff=0.9422;MQ=81.83;MQ0=0;MQRankSum=1.322;QD=44.37;ReadPosRankSum=3.898;VQSLOD=6.2952;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,126,1861	1/1:0,10:10:24.08:431,24,0	0/0:27,0:26:60.50:0,61,854	0/1:18,0:19:0.77:1,0,302	1/1:1,32:33:90.31:1616,90,0	0/0:26,0:26:75.20:0,75,1060	0/0:34,0:34:99:0,102,1409	0/0:38,0:38:99:0,100,1405	0/0:22,0:22:63.18:0,63,900	1/1:1,27:29:81.24:1326,81,0	1/1:0,19:20:54.18:968,54,0	0/0:23,0:23:69.22:0,69,1024	1/1:0,18:18:48.16:861,48,0	1/1:1,21:22:54.18:970,54,0	0/0:21,0:21:63.20:0,63,925	0/0:19,0:19:57.18:0,57,852	1/1:0,31:32:90.31:1617,90,0	0/0:26,0:26:70.53:0,71,1028	0/0:15,0:15:42.06:0,42,537	0/0:22,0:22:66.21:0,66,987	0/0:37,0:37:99:0,111,1502	0/0:26,0:26:78.23:0,78,1127	0/0:16,0:16:48.16:0,48,734	0/0:32,0:32:90.27:0,90,1310	0/0:30,0:30:87.26:0,87,1268	1/1:0,37:36:99:1818,108,0	1/1:0,20:20:57.20:1022,57,0	1/1:0,2:2:6.02:108,6,0
chr10	18912645	.	AAC	A	799.66	PASS	AB=0.935;AC=31;AF=0.738;AN=42;BaseQRankSum=3.467;DP=512;FS=1.068;HRun=0;HaplotypeScore=75.3083;InbreedingCoeff=0.0074;MQ=68.92;MQ0=8;MQRankSum=0.509;QD=2.28;ReadPosRankSum=2.421;VQSLOD=1.6498;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:30,3:32:36.11:46,0,36	1/1:3,0:4:2.84:14,3,0	./.	./.	0/0:17,0:19:6.01:0,6,70	1/1:12,3:15:9.02:96,9,0	1/1:14,3:17:9.02:96,9,0	0/0:21,0:21:2.84:0,3,10	./.	0/1:21,0:21:18.60:20,0,19	./.	1/1:14,0:19:9.12:93,9,0	./.	0/1:16,0:16:0:0,0,0	0/1:25,2:27:13.92:14,0,198	0/1:16,1:18:28.07:28,0,158	1/1:24,0:31:8.52:42,9,0	0/1:18,1:19:22.49:22,0,58	./.	1/1:10,1:14:5.80:45,6,0	./.	1/1:12,4:16:8.98:84,9,0	1/1:16,6:21:11.82:109,12,0	1/1:19,5:23:8.98:84,9,0	0/1:9,1:11:33.38:37,0,33	1/1:17,0:21:8.52:42,9,0	1/1:11,0:13:2.84:14,3,0	1/1:2,0:7:8.52:42,9,0
chr10	18913243	.	A	AC	8747.45	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=4.183;DP=635;FS=8.432;HRun=2;HaplotypeScore=80.8316;InbreedingCoeff=0.9999;MQ=91.53;MQ0=0;MQRankSum=-1.583;QD=41.07;ReadPosRankSum=1.364;VQSLOD=4.6965;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:87.26:0,87,1066	1/1:0,14:14:42.14:605,42,0	0/0:33,0:33:89.26:0,89,1056	0/0:21,0:21:51.15:0,51,615	1/1:0,25:25:69.23:992,69,0	0/0:20,0:20:60.19:0,60,744	0/0:19,0:19:54.17:0,54,669	0/0:18,0:18:51.15:0,51,620	0/0:13,0:13:39.11:0,39,471	1/1:1,23:24:72.19:994,72,0	1/1:1,18:19:54.18:778,54,0	0/0:20,0:20:60.19:0,60,744	1/1:0,24:24:72.24:1035,72,0	1/1:0,15:15:45.15:648,45,0	0/0:31,0:31:90.28:0,90,1116	0/0:26,0:26:78.25:0,78,967	1/1:0,32:32:90.30:1296,90,0	0/0:21,0:21:50.09:0,50,696	0/0:30,0:30:84.26:0,84,1041	0/0:31,0:31:84.25:0,84,1029	0/0:20,0:20:57.18:0,57,706	0/0:19,0:19:54.16:0,54,658	0/0:19,0:19:54.17:0,54,669	0/0:20,0:20:60.15:0,60,726	0/0:32,0:32:93.25:0,93,1125	1/1:0,18:18:54.17:759,54,0	1/1:1,29:30:84.28:1209,84,0	1/1:2,10:12:30.10:432,30,0
chr10	18913505	.	GGAGA	G	155.16	PASS	AB=0.783;AC=7;AF=0.146;AN=48;BaseQRankSum=1.768;DP=573;FS=10.602;HRun=0;HaplotypeScore=92.3549;InbreedingCoeff=0.4838;MQ=75.18;MQ0=6;MQRankSum=0.578;QD=2.13;ReadPosRankSum=-0.371;VQSLOD=0.7200;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:15.05:0,15,234	1/1:6,0:6:2.99:23,3,0	./.	0/0:41,0:26:0:0,0,0	0/0:23,0:23:3.01:0,3,57	0/0:13,0:13:0:0,0,0	1/1:26,3:28:3.01:46,3,0	./.	1/1:18,2:20:6.02:92,6,0	0/0:15,0:15:4.26:0,4,73	./.	0/0:15,0:16:9.03:0,9,138	0/0:16,0:16:4.83:0,5,72	0/0:20,0:19:15.03:0,15,273	0/0:17,0:16:6.02:0,6,139	0/1:13,3:18:0.43:107,0,0	0/0:20,0:20:12.04:0,12,217	0/0:17,0:18:14.77:0,15,197	0/0:26,0:26:16.30:0,16,286	0/0:20,0:20:3.01:0,3,43	0/0:24,0:24:12.04:0,12,231	0/0:24,0:24:9.03:0,9,153	0/0:20,0:18:3.01:0,3,43	0/0:25,0:25:30.10:0,30,537	0/0:20,0:20:12.04:0,12,204	0/0:20,0:20:22.31:0,22,408	0/0:18,0:18:15.05:0,15,261	./.
chr10	18915875	.	A	AT	4498.02	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=7.369;DP=504;FS=5.085;HRun=2;HaplotypeScore=85.4883;InbreedingCoeff=0.9569;MQ=74.59;MQ0=2;MQRankSum=-0.992;QD=23.80;ReadPosRankSum=0.906;VQSLOD=4.5412;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:50.90:0,51,415	1/1:11,0:11:32.28:279,32,0	0/0:18,0:15:30.62:0,31,258	0/0:8,1:7:0.07:0,0,76	1/1:26,0:26:66.03:654,66,0	0/0:20,0:20:57.04:0,57,571	0/0:8,0:8:18.40:0,18,241	0/0:25,0:25:62.95:0,63,663	0/0:12,0:12:35.91:0,36,290	1/1:23,3:26:74.91:759,75,0	1/1:23,2:25:65.77:660,66,0	0/0:21,0:21:60.14:0,60,691	1/1:8,1:8:15.01:144,15,0	1/1:13,1:14:27.06:283,27,0	0/0:23,0:23:65.92:0,66,678	0/0:23,0:23:66.13:0,66,739	1/1:17,0:17:24.03:236,24,0	0/0:12,0:12:36.06:0,36,402	0/0:22,0:22:63.12:0,63,684	0/0:25,0:25:66.44:0,66,733	0/0:12,0:12:27.05:0,27,294	0/0:12,0:12:33.02:0,33,325	0/0:19,0:19:50.99:0,51,532	0/0:12,0:12:32.98:0,33,349	0/0:18,0:18:48.12:0,48,552	1/1:24,0:24:71.94:696,72,0	1/1:25,2:27:59.78:588,60,0	1/1:10,0:10:21.02:200,21,0
chr10	18915877	.	T	TTA	7687.60	PASS	AB=0.900;AC=21;AF=0.375;AN=56;BaseQRankSum=-2.050;DP=512;FS=7.992;HRun=0;HaplotypeScore=85.3240;InbreedingCoeff=0.9214;MQ=74.48;MQ0=2;MQRankSum=-0.923;QD=37.14;ReadPosRankSum=0.899;VQSLOD=6.8121;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:24:51.08:0,51,508	1/1:0,11:11:33.06:558,33,0	0/0:17,0:15:30.83:0,31,291	0/1:8,0:7:25.86:26,0,92	1/1:0,21:24:69.05:1145,69,0	0/0:20,0:20:57.09:0,57,720	0/0:9,0:10:29.36:0,29,356	0/0:22,0:24:65.95:0,66,850	0/0:0,0:12:36.07:0,36,369	1/1:3,20:26:75.05:1072,75,0	1/1:2,19:27:66.14:1043,66,0	0/0:20,0:20:60.17:0,60,879	1/1:2,7:9:18.06:292,18,0	1/1:1,13:15:27.09:501,27,0	0/0:21,0:23:50.95:0,51,853	0/0:22,0:23:66.17:0,66,956	1/1:1,14:19:24.08:425,24,0	0/0:14,0:14:39.02:0,39,519	0/0:20,0:21:63.15:0,63,839	0/0:22,0:24:71.52:0,72,929	0/0:9,0:12:30.02:0,30,391	0/0:12,0:12:36.03:0,36,442	0/0:18,0:19:54.06:0,54,704	0/0:12,0:12:33.07:0,33,463	0/0:17,0:17:48.12:0,48,689	1/1:2,23:28:74.66:1180,75,0	1/1:2,22:27:60:1043,60,0	1/1:0,10:11:21.07:404,21,0
chr10	18916687	.	CA	C	10404.60	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=13.307;DP=712;FS=9.987;HRun=4;HaplotypeScore=81.9691;InbreedingCoeff=0.9983;MQ=82.02;MQ0=0;MQRankSum=-0.947;QD=31.72;ReadPosRankSum=1.397;VQSLOD=4.8823;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:58:99:0,168,2247	0/0:6,0:6:18.06:0,18,252	0/0:22,0:22:66.07:0,66,843	0/0:16,0:16:48.13:0,48,599	0/0:21,0:21:60.20:0,60,839	1/1:0,15:15:42.13:504,42,0	1/1:1,31:32:90.28:1080,90,0	1/1:4,23:27:69.18:804,69,0	0/0:23,0:23:69.23:0,69,965	0/0:39,0:39:99:0,111,1536	0/0:17,0:17:48.16:0,48,671	1/1:2,25:27:72.22:864,72,0	0/0:24,0:24:72.23:0,72,979	0/0:20,1:21:24.17:0,24,742	1/1:1,22:23:63.19:756,63,0	0/0:20,0:20:60.19:0,60,824	0/0:32,0:32:87.28:0,87,1202	0/0:23,0:23:66.22:0,66,917	1/1:1,28:29:84.25:1000,84,0	1/1:0,20:20:51.15:609,51,0	1/1:2,48:50:99:1656,138,0	1/1:2,23:25:60.18:720,60,0	1/1:2,15:17:42.13:504,42,0	1/1:2,42:44:99:1476,123,0	1/1:3,16:19:36.11:432,36,0	0/0:33,0:33:99:0,99,1367	0/0:21,0:21:60.19:0,60,822	0/0:8,0:8:24.08:0,24,336
chr10	18917170	.	GGGGTTTAAC	G	19780.19	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=18.822;DP=650;FS=10.577;HRun=0;HaplotypeScore=195.6300;InbreedingCoeff=0.9956;MQ=72.13;MQ0=0;MQRankSum=-19.621;QD=73.26;ReadPosRankSum=0.853;VQSLOD=4.2159;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,151,7379	0/0:12,0:12:36.12:0,36,1773	0/0:18,0:18:54.19:0,54,2372	0/0:19,0:19:57.15:0,57,2093	0/0:29,0:29:87.30:0,87,4354	1/1:0,27:27:63.22:2033,63,0	1/1:0,21:21:51.18:1659,51,0	1/1:0,21:21:62.31:1658,62,0	0/0:20,0:20:60.21:0,60,3037	0/0:33,0:33:99:0,99,4679	0/0:18,0:18:54.16:0,54,2304	1/1:0,36:36:96.33:3121,96,0	0/0:24,0:24:72.25:0,72,3575	0/0:23,0:23:69.24:0,69,3216	1/1:0,27:27:75.26:2380,75,0	0/0:30,0:30:90.30:0,90,4143	0/0:22,0:22:66.23:0,66,2986	0/0:14,0:14:39.13:0,39,1918	1/1:0,11:11:33.04:779,33,0	1/1:0,19:19:45.15:1464,45,0	1/1:0,12:12:12.04:390,12,0	1/1:1,22:23:54.19:1754,54,0	1/1:0,23:23:62.62:1758,63,0	1/1:0,26:26:33.39:912,33,0	1/1:0,24:24:60.14:1872,60,0	0/0:25,0:25:75.26:0,75,3457	0/0:28,0:28:84.29:0,84,4134	0/0:15,0:15:42.14:0,42,2078
chr10	18919652	.	TTCTCTCTCTCTCTC	T	3515.32	PASS	AB=0.769;AC=15;AF=0.288;AN=52;BaseQRankSum=6.577;DP=596;FS=5.396;HRun=0;HaplotypeScore=241.0234;InbreedingCoeff=0.7659;MQ=64.19;MQ0=10;MQRankSum=-5.058;QD=26.63;ReadPosRankSum=2.162;VQSLOD=2.4208;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:27:15.05:0,15,793	./.	0/0:34,0:17:6.02:0,6,146	0/0:46,0:25:19.78:0,20,596	1/1:12,3:15:3.01:46,3,0	0/0:24,0:25:48.16:0,48,2903	0/0:23,0:26:54.19:0,54,3347	0/0:28,0:29:39.13:0,39,1627	0/0:7,0:9:15.05:0,15,787	1/1:13,12:26:39.13:1295,39,0	./.	0/0:16,0:16:21.06:0,21,1009	1/1:9,8:17:12.04:474,12,0	1/1:8,4:14:6.02:237,6,0	0/0:18,0:19:36.11:0,36,1984	0/0:12,0:18:36.12:0,36,1949	1/1:9,6:15:3.01:119,3,0	0/0:13,0:14:36.12:0,36,1864	0/0:14,0:18:33.10:0,33,993	0/0:7,0:17:39.13:0,39,1800	0/0:27,0:45:63.19:0,63,2352	0/0:17,0:17:36.12:0,36,2131	0/0:18,0:22:33.10:0,33,1407	0/0:18,0:37:33.11:0,33,1944	0/0:15,0:15:21.06:0,21,1169	1/1:14,11:25:30.08:894,30,0	0/1:7,0:10:24.88:213,0,25	1/1:7,2:9:6.02:237,6,0
chr10	18919707	.	C	CGTGTGT	6109.79	PASS	AB=0.845;AC=42;AF=0.778;AN=54;BaseQRankSum=-1.346;DP=587;FS=7.459;HRun=0;HaplotypeScore=162.3524;InbreedingCoeff=0.5727;MQ=53.58;MQ0=7;MQRankSum=-1.739;QD=12.76;ReadPosRankSum=-0.417;VQSLOD=3.2612;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,0:28:3.48:35,3,0	1/1:8,2:10:11.66:192,12,0	0/0:19,0:6:0.89:0,1,2	0/1:17,0:5:0:0,0,0	1/1:11,0:21:7.83:114,8,0	./.	1/1:18,12:31:3.01:39,3,0	1/1:19,0:18:24.25:244,24,0	1/1:2,0:21:35.21:376,35,0	1/1:26,5:30:44.15:1006,44,0	0/0:12,3:16:0.47:0,0,1	1/1:4,17:22:6.96:197,7,0	1/1:13,2:16:11.98:152,12,0	1/1:8,8:17:3.01:39,3,0	0/1:11,8:20:0:0,0,0	0/0:12,0:15:27.08:0,27,455	1/1:17,1:19:16.20:271,16,0	0/0:16,0:15:24.04:0,24,428	1/1:17,0:17:24.05:407,24,0	1/1:13,14:29:14.57:305,15,0	1/1:28,0:27:20.97:298,21,0	1/1:8,8:19:0.31:1,0,0	0/0:8,9:16:0.47:0,0,1	1/1:38,1:37:26.75:608,27,0	1/1:5,4:11:6.02:77,6,0	1/1:22,5:27:57.14:1216,57,0	1/1:8,7:16:15.05:437,15,0	1/1:5,9:16:3.01:98,3,0
chr10	18920618	.	G	GA	13479.18	PASS	AB=0.556;AC=47;AF=0.839;AN=56;BaseQRankSum=-9.150;DP=618;FS=5.710;HRun=9;HaplotypeScore=55.7522;InbreedingCoeff=0.8205;MQ=71.87;MQ0=0;MQRankSum=-1.021;QD=24.37;ReadPosRankSum=1.104;VQSLOD=5.7434;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,0:16:9.44:137,9,0	1/1:0,8:8:24.02:252,24,0	0/0:17,0:15:22.70:0,23,185	0/0:8,0:8:11.99:0,12,104	1/1:7,37:44:99:1256,112,0	1/1:3,19:22:51.14:564,51,0	1/1:4,13:17:13.05:372,13,0	1/1:13,33:46:53.08:1002,53,0	1/1:3,0:20:45.61:233,46,0	1/1:7,26:33:55.14:826,55,0	1/1:5,24:31:65.09:725,65,0	1/1:4,14:18:48.13:529,48,0	1/1:2,14:16:39.11:431,39,0	1/1:0,18:18:45.12:498,45,0	1/1:1,21:22:54.15:597,54,0	0/0:28,0:28:80.94:0,81,693	0/1:2,8:10:31.06:145,0,31	0/0:12,0:12:32.94:0,33,279	1/1:1,14:15:39.09:423,39,0	1/1:8,29:37:69.65:928,70,0	1/1:2,15:17:39.11:431,39,0	1/1:4,17:21:25.12:505,25,0	1/1:3,17:20:48.13:531,48,0	1/1:2,10:12:7.03:306,7,0	1/1:2,28:30:66.18:730,66,0	1/1:5,23:28:66.18:730,66,0	1/1:5,31:36:75.20:830,75,0	1/1:0,16:16:45.12:498,45,0
chr10	18920941	.	C	CA	19263.14	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=3.907;DP=568;FS=9.235;HRun=1;HaplotypeScore=76.7785;InbreedingCoeff=0.9996;MQ=73.89;MQ0=0;MQRankSum=-1.877;QD=41.52;ReadPosRankSum=3.128;VQSLOD=5.0762;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:63.20:0,63,817	1/1:0,13:13:36.12:538,36,0	0/0:21,0:21:63.15:0,63,764	0/0:12,0:12:33.10:0,33,416	1/1:1,29:30:87.29:1304,87,0	1/1:2,25:26:66.22:989,66,0	1/1:2,14:16:36.12:540,36,0	1/1:1,28:29:84.26:1219,84,0	0/0:22,0:22:66.20:0,66,842	1/1:2,25:27:78.22:1143,78,0	1/1:2,25:27:72.24:1079,72,0	1/1:0,9:9:27.09:405,27,0	1/1:0,13:13:36.12:538,36,0	1/1:1,19:20:57.19:855,57,0	1/1:0,22:22:63.21:944,63,0	0/0:12,0:12:36.12:0,36,467	1/1:0,23:23:57.19:854,57,0	0/0:14,0:14:42.14:0,42,543	1/1:3,15:18:48.16:715,48,0	1/1:1,26:27:78.26:1169,78,0	1/1:0,12:12:36.12:540,36,0	1/1:0,16:16:48.16:720,48,0	1/1:1,22:23:60.20:899,60,0	1/1:1,19:20:54.18:810,54,0	1/1:0,22:22:66.22:989,66,0	1/1:0,26:26:78.22:1125,78,0	1/1:0,27:27:78.26:1169,78,0	1/1:1,16:16:48.16:720,48,0
chr10	18925409	.	ATGTGTGTGTGTGTG	A	3724.08	PASS	AB=0.828;AC=16;AF=0.296;AN=54;BaseQRankSum=7.583;DP=885;FS=11.863;HRun=0;HaplotypeScore=333.8340;InbreedingCoeff=0.2735;MQ=57.03;MQ0=25;MQRankSum=-6.904;QD=10.92;ReadPosRankSum=-2.928;VQSLOD=-0.0601;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:34,0:44:99:131,0,135	1/1:10,6:16:12.04:421,12,0	0/0:65,0:31:6.91:0,7,88	0/0:57,0:30:3.01:0,3,41	0/1:8,9:18:0.01:0,0,0	0/0:20,0:22:30.09:0,30,841	0/0:30,0:33:27.08:0,27,796	0/0:29,0:28:18.69:0,19,347	0/1:47,0:50:99:187,0,393	0/1:26,5:31:27.15:398,0,27	./.	0/0:32,0:36:57.19:0,57,1418	1/1:24,8:31:12.04:436,12,0	0/1:22,4:25:1.23:563,0,1	0/0:31,0:32:7.65:0,8,1073	0/0:19,0:20:18.53:0,19,518	0/1:22,5:27:43.81:450,0,44	0/1:24,0:28:16.55:17,0,1065	0/0:23,0:22:17.53:0,18,351	0/0:13,0:14:15.03:0,15,481	0/0:60,0:62:62.68:0,63,1907	0/0:26,0:32:29.98:0,30,717	0/0:18,0:19:24.08:0,24,646	0/0:36,0:46:72.20:0,72,2486	0/0:23,0:31:24.07:0,24,840	1/1:28,12:40:4.73:733,5,0	0/1:16,5:20:20.42:318,0,20	1/1:6,0:6:3.01:70,3,0
chr10	18925535	.	A	ATG	23574.16	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-11.757;DP=1100;FS=13.851;HRun=0;HaplotypeScore=159.6532;InbreedingCoeff=0.9768;MQ=57.87;MQ0=7;MQRankSum=1.357;QD=27.90;ReadPosRankSum=2.937;VQSLOD=5.6666;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:89.24:0,89,1192	1/1:4,7:11:17.80:258,18,0	0/0:52,0:34:50.06:0,50,544	0/0:50,0:36:33.08:0,33,376	1/1:3,29:31:50.18:763,50,0	1/1:12,25:37:90.25:1406,90,0	1/1:8,33:42:28.86:987,29,0	1/1:13,25:40:27.25:1117,27,0	0/0:52,0:52:99:0,138,1676	1/1:5,28:32:43.71:1199,44,0	1/1:3,21:25:33:503,33,0	1/1:6,38:45:84.29:1385,84,0	1/1:8,39:47:79.42:1782,79,0	1/1:6,36:41:90.31:1482,90,0	1/1:7,36:42:72.25:1187,72,0	0/0:32,0:32:84.37:0,84,1103	1/1:5,32:38:22.69:889,23,0	0/0:27,0:27:45.18:0,45,713	1/1:9,8:17:27.08:411,27,0	1/1:4,29:33:54.65:810,55,0	1/1:29,113:143:93.37:3403,93,0	1/1:5,28:33:7.63:629,8,0	1/1:3,16:19:13.21:451,13,0	1/1:13,44:57:90.18:1486,90,0	1/1:3,30:32:48.16:791,48,0	1/1:9,33:42:99:1637,102,0	1/1:3,15:18:33.11:545,33,0	1/1:4,10:14:32.83:451,33,0
chr10	18925541	.	G	GCA	446.89	PASS	AB=0.984;AC=15;AF=0.268;AN=56;BaseQRankSum=11.858;DP=1129;FS=14.196;HRun=0;HaplotypeScore=245.3898;InbreedingCoeff=-0.1995;MQ=58.77;MQ0=7;MQRankSum=-5.145;QD=0.95;ReadPosRankSum=6.252;VQSLOD=0.5558;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,111,1774	0/1:9,1:10:16.83:73,0,17	0/0:55,0:35:96.09:0,96,1379	0/0:53,0:37:78.64:0,79,1233	0/1:31,0:30:14.80:15,0,39	0/0:40,0:40:0.41:0,0,232	0/1:42,0:42:7.83:8,0,187	0/0:39,0:39:55.15:0,55,591	0/0:54,0:54:99:0,157,2512	0/0:34,0:33:12.77:0,13,346	1/1:25,0:25:11.48:40,11,0	0/1:46,0:46:22.91:23,0,109	0/1:49,0:49:32.87:33,0,268	0/1:43,0:42:21.28:21,0,113	0/1:41,0:40:9.22:9,0,168	0/0:33,0:33:86.09:0,86,1503	0/1:39,0:39:50.86:51,0,116	0/0:29,0:28:62.15:0,62,1057	0/0:18,0:17:31.27:0,31,293	0/1:35,0:36:44.46:44,0,64	0/0:142,1:143:19.75:0,20,613	0/1:34,0:34:39.04:39,0,114	0/1:20,0:20:10.49:10,0,77	0/0:58,0:58:15.37:0,15,339	0/1:39,0:38:15.06:114,0,15	0/0:42,0:42:21.31:0,21,271	0/0:19,0:19:8.12:0,8,145	0/1:14,2:16:55.40:123,0,55
chr10	18925755	.	G	GA	1998.05	PASS	AB=0.851;AC=10;AF=0.179;AN=56;BaseQRankSum=15.447;DP=961;FS=180.657;HRun=0;HaplotypeScore=360.6758;InbreedingCoeff=-0.2177;MQ=58.42;MQ0=0;MQRankSum=-13.061;QD=5.22;ReadPosRankSum=2.349;VQSLOD=0.0443;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:48,2:50:20.44:0,20,1579	0/1:15,2:17:98.25:98,0,419	0/0:30,1:24:68.59:0,69,911	0/0:52,0:47:85.95:0,86,1578	0/1:36,5:41:86.29:86,0,696	0/0:27,0:27:77.29:0,77,1051	0/0:30,0:30:27.51:0,28,942	0/0:48,0:48:99:0,141,1933	0/0:38,0:38:65.94:0,66,1023	0/1:47,6:53:99:324,0,1329	0/1:27,7:34:87.45:87,0,620	0/0:31,0:31:73.22:0,73,1005	0/0:27,0:27:60.38:0,60,954	0/0:25,0:25:72.06:0,72,886	0/0:27,0:27:71.06:0,71,853	0/0:32,0:32:75.95:0,76,1065	0/0:20,0:20:53.27:0,53,737	0/0:24,0:24:53.57:0,54,782	0/0:13,0:12:30.76:0,31,457	0/1:25,11:35:99:509,0,486	0/0:56,0:56:99:0,144,1968	0/1:47,10:57:99:242,0,1208	0/1:28,8:36:99:195,0,785	0/0:31,0:31:87.24:0,87,1193	0/1:35,10:45:99:320,0,771	0/1:47,4:51:99:157,0,1256	0/0:16,0:16:41.39:0,41,532	0/1:10,3:13:99:125,0,258
chr10	18925766	.	T	TGG	2574.03	PASS	AB=0.826;AC=10;AF=0.179;AN=56;BaseQRankSum=16.289;DP=925;FS=201.302;HRun=0;HaplotypeScore=425.9959;InbreedingCoeff=-0.2456;MQ=58.01;MQ0=0;MQRankSum=-14.957;QD=7.62;ReadPosRankSum=-0.569;VQSLOD=-0.2399;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,2:47:6.07:0,6,1611	0/1:13,1:14:33.81:34,0,437	0/0:30,0:26:75.26:0,75,1221	0/0:48,0:44:99:0,115,1713	0/1:25,6:31:99:103,0,614	0/0:27,0:27:49.94:0,50,1088	0/0:30,1:31:21.18:0,21,950	0/0:61,0:61:99:0,132,2350	0/0:36,0:36:71.42:0,71,1172	0/1:38,8:46:99:375,0,1237	0/1:22,8:30:99:186,0,676	0/0:36,0:36:47.91:0,48,1200	0/0:26,0:26:58.21:0,58,1063	0/0:24,0:24:65:0,65,1009	0/0:30,0:30:4.31:0,4,907	0/0:38,0:38:57.63:0,58,1304	0/0:18,0:18:35.76:0,36,575	0/0:22,0:22:59.28:0,59,872	0/0:15,0:15:1:0,1,363	0/1:22,11:32:99:521,0,550	0/0:50,0:50:99:0,123,1947	0/1:43,9:52:99:359,0,1381	0/1:25,9:34:99:273,0,727	0/0:32,0:32:71.91:0,72,1161	0/1:27,10:37:99:470,0,670	0/1:43,5:48:99:232,0,1076	0/0:16,0:16:8.45:0,8,535	0/1:9,4:13:99:165,0,308
chr10	18955215	.	TGA	T	1477.08	PASS	AB=0.941;AC=16;AF=0.286;AN=56;BaseQRankSum=8.838;DP=732;FS=57.089;HRun=0;HaplotypeScore=323.1969;InbreedingCoeff=-0.0992;MQ=36.72;MQ0=10;MQRankSum=-5.980;QD=3.20;ReadPosRankSum=-0.910;VQSLOD=0.6073;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:33,1:34:34.77:273,35,0	0/1:19,1:20:7.24:100,0,7	0/0:47,0:13:39.07:0,39,574	0/0:35,0:15:29.43:0,29,489	0/0:36,1:37:8.65:0,9,59	0/0:9,0:9:13.92:0,14,55	0/0:13,1:14:1.92:0,2,50	0/1:31,1:32:43.22:43,0,232	1/1:42,2:43:14.03:240,14,0	0/1:35,4:38:99:155,0,172	0/1:26,1:27:17.81:53,0,18	0/0:19,0:19:25.09:0,25,89	0/0:21,0:22:20.20:0,20,102	0/0:14,0:14:7.61:0,8,37	0/0:19,0:19:22.17:0,22,91	0/1:34,1:35:56.05:56,0,709	0/0:5,0:5:0.55:0,1,8	0/1:20,2:21:43.17:43,0,672	0/1:16,1:14:42.16:42,0,75	0/1:45,2:47:38.58:103,0,39	0/0:16,0:16:13.12:0,13,59	0/1:33,4:37:54.55:63,0,55	0/1:38,7:45:21.99:118,0,22	0/0:9,0:9:7.53:0,8,26	0/1:36,1:38:80.03:293,0,80	0/1:23,1:24:58.86:59,0,117	0/0:19,0:19:17.16:0,17,124	0/0:6,0:5:9.11:0,9,41
chr10	18955217	.	AGTGT	A	11110.26	PASS	AB=0.696;AC=40;AF=0.714;AN=56;BaseQRankSum=-2.920;DP=742;FS=10.845;HRun=0;HaplotypeScore=312.2159;InbreedingCoeff=0.6900;MQ=36.74;MQ0=11;MQRankSum=0.135;QD=21.41;ReadPosRankSum=4.412;VQSLOD=3.3887;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:35:43.27:0,43,249	1/1:9,10:19:20.13:436,20,0	0/0:49,0:13:24.08:0,24,484	0/0:36,0:15:9.25:0,9,448	1/1:21,16:37:25.22:556,25,0	1/1:2,7:9:16.59:272,17,0	1/1:5,9:14:28.51:431,29,0	0/1:26,7:33:2.56:518,0,3	0/0:27,0:43:39.05:0,39,206	1/1:23,16:39:7.95:932,8,0	1/1:17,10:27:23.92:433,24,0	1/1:2,16:18:42.11:682,42,0	1/1:4,18:23:49.68:760,50,0	1/1:2,11:14:30.05:455,30,0	1/1:0,19:19:33.04:499,33,0	0/0:36,0:36:25.51:0,26,1061	1/1:0,5:5:9.03:153,9,0	0/0:23,0:22:21.87:0,22,1022	0/1:16,3:16:62.25:137,0,62	1/1:30,16:47:53.93:858,54,0	0/1:2,14:16:3.76:425,0,4	1/1:20,17:38:49.30:776,49,0	1/1:31,14:45:17.49:582,17,0	0/1:2,7:9:0.61:141,0,1	1/1:26,12:38:32.89:719,33,0	1/1:11,13:24:21.91:662,22,0	1/1:5,14:19:23.67:533,24,0	1/1:2,4:5:9.03:153,9,0
chr10	18955299	.	G	GTGTGTGTTTGAATGCA	42491.32	PASS	AB=0.876;AC=42;AF=0.750;AN=56;BaseQRankSum=-0.323;DP=626;FS=226.587;HRun=0;HaplotypeScore=297.4621;InbreedingCoeff=0.8178;MQ=57.70;MQ0=2;MQRankSum=-9.720;QD=108.67;ReadPosRankSum=-3.743;VQSLOD=0.6246;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,141,5557	1/1:7,1:8:11.40:521,11,0	0/0:33,0:31:66.22:0,66,2549	0/0:35,0:28:49.04:0,49,1680	1/1:15,10:25:52:2262,52,0	1/1:7,3:10:21.83:1357,22,0	1/1:12,5:17:33.52:1817,34,0	1/1:32,0:31:81.19:3658,81,0	0/0:45,0:44:99:0,113,4760	1/1:21,5:26:60.79:3253,61,0	0/1:7,2:9:1.10:684,0,1	1/1:9,5:14:29.69:1831,30,0	1/1:14,4:18:36.11:1860,36,0	1/1:12,5:17:39.13:2239,39,0	1/1:19,5:23:51.18:2476,51,0	0/0:36,0:36:87.30:0,87,3840	0/1:13,1:14:7.38:1491,0,7	0/0:31,0:30:85.17:0,85,3202	1/1:18,3:21:33.09:1745,33,0	1/1:17,11:30:72.20:3784,72,0	1/1:15,2:17:35.10:1730,35,0	1/1:11,4:15:21.63:1375,22,0	1/1:11,9:20:42.14:2292,42,0	1/1:13,3:16:26.76:1003,27,0	1/1:13,8:21:6.18:2080,6,0	1/1:21,6:27:72.72:3914,73,0	1/1:7,1:8:18.06:909,18,0	1/1:2,0:2:6.02:208,6,0
chr10	18955960	.	T	TAC	2200.50	PASS	AB=0.789;AC=21;AF=0.375;AN=56;BaseQRankSum=-1.179;DP=610;FS=0.559;HRun=0;HaplotypeScore=152.3077;InbreedingCoeff=0.3312;MQ=67.74;MQ0=5;MQRankSum=1.166;QD=6.77;ReadPosRankSum=-3.571;VQSLOD=2.8018;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:34,0:34:22.15:22,0,117	0/0:8,0:8:13.99:0,14,66	0/0:38,0:25:26.59:0,27,298	0/0:42,0:26:42.09:0,42,494	0/0:33,0:33:3.10:0,3,14	0/1:19,3:23:3.60:181,0,4	1/1:16,5:21:5.74:283,6,0	1/1:24,0:24:13.34:114,13,0	0/0:15,0:15:20.49:0,20,138	0/0:23,0:23:16.01:0,16,78	0/0:15,0:15:2.80:0,3,13	0/1:8,4:12:26.47:160,0,26	0/0:16,0:16:24.88:0,25,115	0/0:9,0:9:2.80:0,3,13	1/1:15,6:21:6.37:313,6,0	0/0:20,0:20:57.16:0,57,691	0/0:21,0:21:10.99:0,11,49	0/0:20,0:20:43.26:0,43,486	1/1:19,1:20:5.40:171,5,0	1/1:13,8:22:3.32:85,3,0	1/1:18,11:28:11.98:178,12,0	0/1:7,12:20:6.84:157,0,7	1/1:20,5:25:15.81:276,16,0	0/1:19,15:34:18.23:224,0,18	0/1:9,13:23:20.24:203,0,20	0/1:17,0:17:10.68:11,0,29	0/0:16,0:16:9.95:0,10,43	0/0:9,0:9:5.60:0,6,26
chr10	18955964	.	CACACACACAT	C	5097.07	PASS	AB=1.000;AC=31;AF=0.554;AN=56;BaseQRankSum=1.321;DP=645;FS=18.560;HRun=0;HaplotypeScore=207.4368;InbreedingCoeff=0.0688;MQ=64.35;MQ0=6;MQRankSum=-1.861;QD=10.84;ReadPosRankSum=2.828;VQSLOD=2.6632;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:37,0:37:99:197,0,1669	1/1:2,7:9:18.01:471,18,0	0/0:41,0:26:25.37:0,25,556	0/0:40,0:22:41.94:0,42,550	1/1:3,29:32:8.86:165,9,0	0/1:21,0:21:18.42:18,0,852	0/1:25,0:25:75.71:76,0,1594	0/1:26,0:26:99:160,0,1017	0/1:21,0:20:48.25:48,0,1244	1/1:2,23:25:65.98:1074,66,0	1/1:2,14:16:3.01:95,3,0	0/0:13,0:13:5.14:0,5,1023	1/1:0,17:17:30.10:925,30,0	1/1:2,9:11:3.01:95,3,0	0/1:21,0:21:64.64:65,0,1449	0/0:20,0:20:60.11:0,60,2248	1/1:1,21:22:12.04:378,12,0	0/0:21,0:21:43.06:0,43,1792	0/0:18,0:18:3.16:0,3,1000	0/1:20,0:20:32.29:32,0,241	0/1:30,0:29:80.22:80,0,867	0/0:22,0:22:1.99:0,2,799	0/1:27,0:27:24.77:25,0,1234	0/1:37,0:37:18.92:19,0,1383	0/1:25,0:25:9.80:10,0,1166	1/1:1,22:23:48.28:581,48,0	1/1:2,15:17:14.98:394,15,0	1/1:0,8:8:6.02:189,6,0
chr10	18957297	.	AGTGTGTGT	A	105.17	PASS	AB=0.917;AC=9;AF=0.196;AN=46;BaseQRankSum=2.763;DP=589;FS=1.486;HRun=0;HaplotypeScore=137.3533;InbreedingCoeff=0.4674;MQ=69.64;MQ0=18;MQRankSum=0.400;QD=0.99;ReadPosRankSum=1.556;VQSLOD=2.8162;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	0/0:11,0:11:9.03:0,9,312	./.	./.	0/0:24,0:25:21.04:0,21,464	0/1:16,0:16:30.20:30,0,31	0/1:19,1:20:1.90:110,0,2	./.	./.	0/0:27,0:25:36.15:0,36,837	0/0:14,0:14:18.04:0,18,555	0/0:22,0:21:3.01:0,3,37	0/0:18,0:19:21.05:0,21,452	0/0:21,0:21:6.02:0,6,213	0/0:13,3:17:5.98:0,6,45	0/0:11,0:11:15.05:0,15,525	0/0:18,0:18:9.03:0,9,309	0/0:18,0:19:35.40:0,35,962	0/0:23,0:23:9.02:0,9,159	0/0:15,0:16:12.01:0,12,181	0/0:46,0:45:18.03:0,18,365	1/1:8,0:13:2.90:16,3,0	0/1:18,6:24:0.03:0,0,1	1/1:22,0:23:2.99:24,3,0	1/1:9,1:9:8.48:45,8,0	0/0:22,0:21:15.05:0,15,397	0/0:26,0:25:18.04:0,18,435	0/0:9,0:9:7.58:0,8,210
chr10	18959907	.	CGT	C	692.77	PASS	AB=0.829;AC=13;AF=0.260;AN=50;BaseQRankSum=0.010;DP=627;FS=12.919;HRun=0;HaplotypeScore=94.2706;InbreedingCoeff=0.4419;MQ=59.69;MQ0=6;MQRankSum=2.627;QD=4.56;ReadPosRankSum=2.809;VQSLOD=1.8262;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:33:20.64:0,21,235	./.	./.	./.	1/1:14,8:23:11.86:111,12,0	0/0:12,0:19:3:0,3,27	0/0:20,0:23:2.73:0,3,25	0/0:25,0:25:17.08:0,17,110	0/0:25,0:27:21.04:0,21,250	1/1:13,2:15:5.52:64,6,0	1/1:8,2:11:8.85:79,9,0	0/0:16,0:21:5.78:0,6,51	0/0:11,0:22:15.48:0,15,180	0/0:9,0:16:18.02:0,18,192	0/0:16,0:25:5.97:0,6,52	0/1:14,3:17:76.16:76,0,134	0/1:15,9:24:19.27:177,0,19	0/1:18,2:20:40.77:41,0,207	0/0:18,0:18:16.17:0,16,143	0/0:24,0:24:18:0,18,206	0/0:42,0:41:8.94:0,9,68	0/0:12,0:12:9:0,9,80	0/0:24,0:24:9.02:0,9,112	0/0:24,0:32:5.49:0,5,46	0/0:18,0:24:9:0,9,82	0/0:23,0:22:9.90:0,10,69	1/1:13,8:24:29.57:269,30,0	1/1:16,2:17:3.01:32,3,0
chr10	18960451	.	G	GTCAGCAGCA	5830.45	PASS	AB=0.977;AC=17;AF=0.304;AN=56;BaseQRankSum=3.214;DP=649;FS=21.202;HRun=0;HaplotypeScore=178.2950;InbreedingCoeff=-0.4422;MQ=62.03;MQ0=1;MQRankSum=-10.646;QD=17.56;ReadPosRankSum=-3.133;VQSLOD=2.3875;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:57:99:0,144,2768	0/1:3,3:8:37.47:92,0,37	0/0:31,0:28:56.41:0,56,985	0/0:35,0:30:64.12:0,64,1444	0/0:12,0:12:17.97:0,18,147	0/1:17,0:17:99:102,0,104	0/1:27,0:27:82.82:921,0,83	0/1:17,0:17:29.14:186,0,29	0/0:28,0:28:75.23:0,75,2041	0/1:19,0:19:88.88:197,0,89	0/0:16,0:16:19.21:0,19,153	0/1:27,0:27:89.84:619,0,90	0/1:15,0:15:63.87:695,0,64	0/1:16,0:16:37.58:927,0,38	0/1:18,0:18:46.88:692,0,47	0/0:22,0:22:54.17:0,54,1491	0/1:36,0:36:17.05:17,0,442	0/0:41,0:41:99:0,108,2947	0/1:21,0:21:99:108,0,149	0/1:15,0:15:21.42:21,0,117	0/0:53,0:53:21.28:0,21,162	0/0:12,0:12:8.94:0,9,73	0/0:8,0:8:11.98:0,12,100	0/1:38,0:38:79.90:223,0,80	0/1:15,0:14:70.14:70,0,96	0/1:18,0:18:99:161,0,136	0/1:17,0:17:29.12:578,0,29	0/1:8,0:8:76.91:222,0,77
chr10	18960452	.	T	TCAGCAGCAG	9988.89	PASS	AB=1.000;AC=39;AF=0.696;AN=56;BaseQRankSum=-3.536;DP=733;FS=4.138;HRun=0;HaplotypeScore=195.4046;InbreedingCoeff=0.7043;MQ=59.98;MQ0=1;MQRankSum=-8.809;QD=23.07;ReadPosRankSum=-5.462;VQSLOD=2.3906;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:59,0:58:76.43:0,76,2043	1/1:11,0:11:12:329,12,0	0/0:30,0:27:42.04:0,42,762	0/0:37,0:31:53.98:0,54,1158	1/1:12,0:12:5.99:49,6,0	1/1:11,7:21:3.01:138,3,0	1/1:20,18:39:28.77:1267,29,0	1/1:20,0:20:33.06:700,33,0	0/0:30,0:30:69.24:0,69,1862	1/1:10,9:22:29.68:448,30,0	1/1:16,0:16:5.98:47,6,0	1/1:11,18:33:23.90:1000,24,0	1/1:4,11:18:18.06:831,18,0	1/1:9,13:22:32.40:1458,32,0	1/1:11,11:23:18.06:828,18,0	0/0:23,0:23:54.17:0,54,1396	0/1:38,0:38:75.23:75,0,343	0/0:42,0:42:99:0,105,2759	1/1:26,0:26:42.97:789,43,0	1/1:16,0:16:6:76,6,0	0/0:30,30:65:0.12:0,0,1	0/0:13,0:13:0.47:0,0,1	1/1:7,0:7:3:25,3,0	1/1:18,24:45:6.02:274,6,0	1/1:16,0:15:13.70:196,14,0	1/1:10,8:19:20.34:346,20,0	1/1:7,10:20:20.86:837,21,0	1/1:4,4:9:6.02:277,6,0
chr10	18960461	.	GCAGCAGCAGTAGCAT	G	1551.86	PASS	AB=1.000;AC=12;AF=0.214;AN=56;BaseQRankSum=-1.210;DP=735;FS=19.283;HRun=0;HaplotypeScore=261.0195;InbreedingCoeff=-0.0625;MQ=57.61;MQ0=2;MQRankSum=0.899;QD=7.76;ReadPosRankSum=-2.529;VQSLOD=0.4701;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:55:99:0,101,4568	0/1:13,0:13:1.03:1,0,640	0/0:32,0:25:60.16:0,60,1991	0/0:37,0:30:66.02:0,66,2350	0/1:11,0:11:16.07:16,0,227	0/0:22,0:22:12.04:0,12,575	0/0:40,0:40:34.04:0,34,2193	0/1:19,0:19:99:118,0,1150	0/0:31,0:31:84.29:0,84,5416	0/1:19,0:19:88.81:89,0,701	0/1:11,0:11:37.97:38,0,173	0/0:36,0:36:39.99:0,40,1899	0/0:19,0:19:21.54:0,22,1201	0/0:22,0:22:27.01:0,27,1500	0/0:21,0:21:23.67:0,24,1414	0/0:21,0:21:60.21:0,60,3897	1/1:1,34:35:32.78:1195,33,0	0/0:40,0:40:99:0,117,7265	0/1:32,0:32:96.18:96,0,1958	0/1:17,0:17:8.94:9,0,377	0/0:73,0:73:38.58:0,39,2112	0/0:13,0:13:3.48:0,3,114	0/1:8,0:8:18.98:19,0,35	0/0:43,0:43:12.59:0,13,710	0/1:18,0:17:72.78:73,0,659	0/1:17,0:17:48.95:49,0,629	0/0:20,0:20:27.09:0,27,1614	0/0:9,0:9:6.02:0,6,381
chr10	18960470	.	GTAGCAT	G	863.78	PASS	AB=0.966;AC=10;AF=0.179;AN=56;BaseQRankSum=2.288;DP=636;FS=19.828;HRun=0;HaplotypeScore=163.9136;InbreedingCoeff=0.0014;MQ=56.15;MQ0=2;MQRankSum=-2.400;QD=6.00;ReadPosRankSum=-1.921;VQSLOD=0.8152;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,122,3016	0/0:12,0:12:2.04:0,2,326	0/0:32,0:25:67.47:0,67,1213	0/0:33,0:26:72.90:0,73,1426	0/1:6,0:6:13.08:13,0,164	0/0:18,0:18:27.09:0,27,448	0/0:36,0:36:50.26:0,50,1283	0/1:23,0:23:99:215,0,623	0/0:32,0:32:90.29:0,90,2842	0/1:10,0:10:56.75:57,0,321	0/1:6,0:6:34.96:35,0,128	0/0:35,0:35:55.58:0,56,1069	0/0:13,0:13:24.55:0,25,595	0/0:24,0:24:45.02:0,45,955	0/0:15,0:15:23.68:0,24,655	0/0:22,0:22:66.23:0,66,2125	1/1:34,0:34:32.62:473,33,0	0/0:40,0:40:99:0,120,3693	0/1:20,8:28:99:115,0,873	0/1:14,0:14:26.84:27,0,160	0/0:55,0:55:72.06:0,72,1399	0/0:5,6:11:9.97:0,10,138	0/1:5,0:5:18.98:19,0,29	0/0:27,0:27:21.67:0,22,484	0/1:17,0:17:59.45:59,0,376	0/0:10,0:10:19.17:0,19,378	0/0:17,0:17:33.11:0,33,837	0/0:5,0:5:9.03:0,9,209
chr10	18960932	.	GTTATTATTATTATTATTATTA	G	8735.66	PASS	AB=0.700;AC=43;AF=0.860;AN=50;BaseQRankSum=2.822;DP=299;FS=0.000;HRun=0;HaplotypeScore=145.0887;InbreedingCoeff=0.1502;MQ=59.16;MQ0=1;MQRankSum=-0.737;QD=32.47;ReadPosRankSum=0.871;VQSLOD=3.6286;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:6,0:21:99:143,0,121	1/1:0,4:4:2.59:167,3,0	0/0:4,0:4:2.98:0,3,22	./.	1/1:7,10:17:15.05:633,15,0	1/1:3,11:14:18.06:970,18,0	1/1:4,4:8:3.01:130,3,0	1/1:13,14:27:42.06:613,42,0	0/1:7,0:13:15.91:152,0,16	1/1:5,10:15:14.80:528,15,0	./.	1/1:1,6:7:6.02:336,6,0	1/1:4,6:10:6.02:306,6,0	1/1:5,4:9:3.01:168,3,0	1/1:13,4:17:33.04:1060,33,0	0/1:4,0:5:39.88:80,0,40	1/1:4,16:19:9.03:451,9,0	0/0:1,0:11:6.02:0,6,309	1/1:6,7:13:20.99:368,21,0	1/1:2,6:8:3.01:168,3,0	1/1:4,0:3:6:69,6,0	1/1:3,2:5:6.02:297,6,0	1/1:5,5:10:6.02:258,6,0	./.	1/1:1,7:8:9.03:467,9,0	1/1:5,7:12:18.05:552,18,0	1/1:2,5:7:6.02:320,6,0	1/1:8,7:15:9.03:501,9,0
chr10	18960955	.	TA	T	969.89	PASS	AB=0.967;AC=30;AF=0.556;AN=54;BaseQRankSum=4.887;DP=206;FS=6.956;HRun=1;HaplotypeScore=69.6974;InbreedingCoeff=0.0432;MQ=50.53;MQ0=4;MQRankSum=-3.687;QD=6.42;ReadPosRankSum=5.641;VQSLOD=0.6690;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:2.24:0,2,79	1/1:4,0:4:2.22:8,2,0	0/0:4,0:2:5.91:0,6,39	0/0:3,0:2:2.94:0,3,18	0/1:12,0:12:4.06:106,0,4	1/1:11,0:11:14.11:75,14,0	1/1:4,0:4:3.01:40,3,0	0/1:14,0:14:99:116,0,180	0/0:8,0:8:3.41:0,3,63	0/1:10,0:10:14.77:55,0,15	./.	1/1:6,0:6:4.44:15,4,0	0/1:6,0:6:2.22:2,0,16	1/1:4,0:4:2.22:7,2,0	1/1:8,4:12:14.10:247,14,0	0/1:2,0:2:0.46:0,0,37	0/1:17,0:16:0.32:38,0,0	0/0:12,0:12:6.96:0,7,73	0/1:8,0:7:58.51:92,0,59	1/1:7,0:7:2.22:7,2,0	0/1:2,2:4:20.34:60,0,20	1/1:2,0:2:5.23:48,5,0	1/1:5,0:5:6.02:79,6,0	0/0:2,0:2:3.01:0,3,30	0/1:8,0:8:15.86:42,0,16	0/1:8,0:8:38.27:61,0,38	0/0:6,0:6:0.17:0,0,23	1/1:7,0:7:6.26:20,6,0
chr10	18962787	.	TACACACAC	T	5262.41	PASS	AB=0.657;AC=23;AF=0.426;AN=54;BaseQRankSum=4.950;DP=562;FS=1.910;HRun=0;HaplotypeScore=162.6518;InbreedingCoeff=0.8345;MQ=64.88;MQ0=6;MQRankSum=-5.573;QD=23.70;ReadPosRankSum=2.387;VQSLOD=4.7153;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,0:28:17.64:334,18,0	1/1:9,9:18:21.07:511,21,0	./.	0/0:22,0:19:12.01:0,12,111	1/1:9,8:17:15:272,15,0	0/0:20,0:21:12:0,12,411	0/0:6,0:13:6.01:0,6,118	0/0:33,0:31:34.17:0,34,802	1/1:8,0:20:12.04:224,12,0	1/1:6,16:22:27.05:750,27,0	0/1:11,12:23:4.11:353,0,4	0/0:9,0:19:6.49:0,6,195	1/1:7,11:18:15.05:380,15,0	1/1:6,13:19:24.08:608,24,0	0/0:11,0:22:9.03:0,9,313	0/0:18,0:20:45.14:0,45,1545	1/1:6,6:13:12.04:263,12,0	0/0:21,0:22:42.11:0,42,1429	0/0:14,0:14:16.55:0,17,272	0/0:15,0:14:14.19:0,14,437	0/0:33,0:31:15.48:0,15,406	0/0:7,0:18:15.03:0,15,421	0/0:13,0:17:5.52:0,6,126	0/0:15,0:25:5.71:0,6,47	0/0:17,0:22:25.28:0,25,727	1/1:5,10:15:30.10:740,30,0	1/1:10,10:20:10.35:446,10,0	1/1:3,6:9:15.05:380,15,0
chr10	18962899	.	T	TTACAG	40592.12	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-10.543;DP=630;FS=5.045;HRun=0;HaplotypeScore=107.9256;InbreedingCoeff=0.9981;MQ=74.90;MQ0=1;MQRankSum=-9.147;QD=82.50;ReadPosRankSum=1.926;VQSLOD=7.3195;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,129,2745	1/1:0,6:6:18.06:581,18,0	0/0:16,0:16:40.82:0,41,730	0/0:19,0:19:48.16:0,48,981	1/1:5,26:34:75.26:2302,75,0	1/1:3,18:25:60.21:1881,60,0	1/1:0,18:18:54.19:1738,54,0	1/1:15,12:30:87.30:2632,87,0	0/0:16,0:16:48.16:0,48,1030	1/1:5,22:28:78.27:2462,78,0	1/1:3,15:18:48.16:1517,48,0	1/1:4,16:22:48.12:1471,48,0	1/1:1,14:15:45.11:1374,45,0	1/1:4,21:26:75.26:2378,75,0	1/1:6,25:31:84.29:2638,84,0	0/0:21,0:21:63.22:0,63,1405	1/1:3,25:27:69.24:2209,69,0	0/0:21,0:21:60.21:0,60,1337	1/1:4,16:19:57.20:1799,57,0	1/1:2,11:13:36.12:1138,36,0	1/1:4,17:24:45.15:1413,45,0	1/1:4,15:19:54.19:1704,54,0	1/1:2,21:25:62.85:2031,63,0	1/1:5,25:31:75.24:2374,75,0	1/1:2,12:15:42.14:1340,42,0	1/1:2,22:25:75.26:2318,75,0	1/1:5,20:27:75.26:2419,75,0	1/1:0,9:10:27.09:871,27,0
chr10	18963111	.	G	GAACA	13157.16	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-14.197;DP=707;FS=0.000;HRun=0;HaplotypeScore=107.5577;InbreedingCoeff=0.9773;MQ=66.86;MQ0=5;MQRankSum=1.247;QD=35.37;ReadPosRankSum=-1.406;VQSLOD=4.4976;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,27:41:69.24:1645,69,0	0/0:19,0:19:36.12:0,36,570	0/0:29,0:21:12.51:0,13,188	0/0:32,0:30:14.54:0,15,217	0/0:29,0:29:54.16:0,54,829	1/1:10,13:23:33.11:783,33,0	1/1:13,16:30:48.16:1110,48,0	1/1:25,3:28:24.07:497,24,0	1/1:5,6:14:21.07:499,21,0	0/0:31,0:31:63.19:0,63,955	0/0:18,0:18:21.07:0,21,328	1/1:6,11:17:33.11:786,33,0	0/0:20,0:20:45.14:0,45,690	0/0:24,0:24:45.14:0,45,679	1/1:10,23:33:66.23:1574,66,0	0/0:30,0:30:57.17:0,57,857	0/0:22,0:22:45.15:0,45,707	0/0:22,0:22:45.15:0,45,704	1/1:16,7:23:21.07:501,21,0	1/1:11,16:29:48.16:1077,48,0	1/1:11,21:32:48.16:1145,48,0	1/1:9,11:23:33.11:765,33,0	1/1:12,20:34:43.56:989,44,0	1/1:6,20:27:48.16:1144,48,0	1/1:9,9:18:27.09:643,27,0	0/0:30,0:30:54.16:0,54,812	0/0:25,0:24:48.16:0,48,748	0/0:4,0:4:6.02:0,6,95
chr10	18963364	.	C	CT	20743.91	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-13.301;DP=660;FS=8.730;HRun=0;HaplotypeScore=59.5860;InbreedingCoeff=0.9957;MQ=91.49;MQ0=0;MQRankSum=-7.872;QD=41.49;ReadPosRankSum=2.598;VQSLOD=5.2706;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:96.11:0,96,1253	1/1:0,9:9:21.07:335,21,0	0/0:24,0:24:69.21:0,69,935	0/0:34,0:34:93.28:0,93,1257	1/1:1,23:24:69.18:1073,69,0	1/1:0,14:14:39.13:623,39,0	1/1:0,22:22:57.19:910,57,0	1/1:2,30:32:90.31:1434,90,0	0/0:28,0:28:84.23:0,84,1106	1/1:0,26:26:78.26:1212,78,0	1/1:0,13:13:30.09:429,30,0	1/1:0,19:19:48.16:767,48,0	1/1:0,28:28:75.26:1198,75,0	1/1:0,23:23:66.23:1054,66,0	1/1:0,29:29:69.24:1103,69,0	0/0:32,0:32:93.28:0,93,1253	1/1:0,26:26:66.23:1054,66,0	0/0:10,0:10:30.08:0,30,399	1/1:0,28:28:84.23:1265,84,0	1/1:0,19:19:51.17:804,51,0	1/1:1,34:35:87.30:1389,87,0	1/1:1,23:24:69.24:1101,69,0	1/1:0,17:17:45.15:719,45,0	1/1:0,20:20:51.17:812,51,0	1/1:1,17:18:45.15:717,45,0	1/1:1,27:28:81.25:1262,81,0	1/1:1,37:38:78.27:1245,78,0	1/1:0,8:8:15.05:239,15,0
chr10	18966541	.	T	TACAC	1797.80	PASS	AB=0.826;AC=37;AF=0.685;AN=54;BaseQRankSum=-0.509;DP=498;FS=27.300;HRun=0;HaplotypeScore=107.9375;InbreedingCoeff=0.3931;MQ=48.69;MQ0=15;MQRankSum=2.077;QD=4.67;ReadPosRankSum=-1.576;VQSLOD=0.5730;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:21:23.55:0,24,324	1/1:4,0:6:10.81:48,11,0	0/0:27,0:12:3.11:0,3,9	0/1:24,0:16:4.08:4,0,73	0/1:9,0:8:19.02:19,0,44	0/1:5,5:10:0:0,0,0	1/1:10,15:26:8.76:154,9,0	1/1:23,0:21:30.25:404,30,0	0/0:20,0:19:12.04:0,12,174	1/1:10,0:15:21.73:113,22,0	0/1:10,0:12:10.82:22,0,11	1/1:19,0:18:14.82:211,15,0	1/1:7,0:15:8.23:37,8,0	1/1:10,0:18:2.74:12,3,0	1/1:16,0:16:2.88:74,3,0	0/0:13,0:12:12.03:0,12,166	0/1:11,0:24:25.07:93,0,25	0/0:22,0:20:38.66:0,39,497	1/1:11,0:11:14.79:242,15,0	1/1:11,0:11:2.57:73,3,0	1/1:12,21:34:3.01:46,3,0	1/1:12,1:13:8.62:134,9,0	./.	0/1:18,29:50:0.01:0,0,0	1/1:11,0:11:12.01:152,12,0	1/1:17,0:20:12.96:59,13,0	1/1:7,0:7:13.06:58,13,0	0/1:3,0:3:4.57:5,0,12
chr10	18966558	.	ACG	A	953.96	PASS	AB=0.987;AC=25;AF=0.463;AN=54;BaseQRankSum=-1.526;DP=467;FS=3.040;HRun=0;HaplotypeScore=92.1938;InbreedingCoeff=-0.0754;MQ=42.72;MQ0=23;MQRankSum=1.715;QD=2.91;ReadPosRankSum=-3.620;VQSLOD=0.7912;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:19:11.54:0,12,283	0/1:8,0:6:9.12:9,0,70	0/1:16,0:2:3.06:11,0,3	0/1:13,0:7:28:65,0,28	0/1:11,0:10:18.92:19,0,52	0/0:13,0:13:0.89:0,1,2	0/1:32,0:30:22.97:23,0,24	0/1:30,0:25:99:180,0,232	0/0:18,0:17:0.78:0,1,125	0/1:17,0:14:29.35:170,0,29	0/1:16,0:16:10.74:11,0,23	0/1:18,1:17:18:70,0,18	0/0:13,0:12:1.09:0,1,112	0/0:10,0:8:3.01:0,3,31	1/1:14,3:16:2.92:24,3,0	0/0:13,0:11:11.87:0,12,100	0/0:19,0:18:32.41:0,32,302	0/0:19,0:17:38:0,38,343	0/1:12,2:13:41.50:113,0,41	1/1:7,3:10:3.30:26,3,0	1/1:29,0:27:1.25:3,1,0	1/1:14,2:16:8.88:71,9,0	./.	0/1:38,0:37:0.11:0,0,0	1/1:17,0:16:14.99:127,15,0	0/1:15,0:15:72.63:73,0,145	0/1:8,0:8:2.06:84,0,2	1/1:2,0:2:3.87:24,4,0
chr10	18966578	.	ACG	A	227.52	PASS	AB=0.975;AC=19;AF=0.365;AN=52;BaseQRankSum=1.089;DP=370;FS=24.208;HRun=0;HaplotypeScore=97.5905;InbreedingCoeff=-0.1032;MQ=32.85;MQ0=27;MQRankSum=-2.046;QD=0.91;ReadPosRankSum=0.358;VQSLOD=0.1936;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:13,1:11:10.53:0,11,76	0/1:8,0:7:17.14:17,0,109	./.	./.	0/0:12,0:9:2.96:0,3,58	0/1:8,1:9:0:1,0,0	0/1:24,0:21:31.87:32,0,53	0/1:18,1:14:12.40:12,0,338	0/1:16,0:15:9.23:9,0,16	0/1:13,0:9:10.18:10,0,58	0/0:15,0:14:6.43:0,6,44	0/1:14,0:14:2.38:2,0,74	0/0:11,0:10:17.76:0,18,208	0/0:7,0:5:3.01:0,3,37	1/1:16,0:13:2.98:25,3,0	0/1:7,1:7:0:0,0,0	0/0:15,0:14:7.77:0,8,321	0/1:15,1:15:26.55:107,0,27	0/1:13,0:9:55.64:56,0,114	1/1:11,0:11:4.08:29,4,0	0/0:25,0:22:1.29:0,1,4	0/1:19,0:20:0.06:21,0,0	0/0:13,0:11:2.84:0,3,9	0/1:31,0:28:0.35:0,0,0	0/1:15,1:14:0.02:0,0,0	0/1:14,0:13:21.65:22,0,191	0/0:3,0:2:3.88:0,4,27	0/1:2,0:2:12:12,0,14
chr10	18966582	.	ACACG	A	188.54	PASS	AB=0.982;AC=22;AF=0.423;AN=52;BaseQRankSum=0.928;DP=358;FS=13.131;HRun=0;HaplotypeScore=101.1209;InbreedingCoeff=-0.0371;MQ=31.50;MQ0=29;MQRankSum=-3.552;QD=0.75;ReadPosRankSum=-0.423;VQSLOD=0.8803;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:11:7.23:0,7,49	0/1:7,0:6:28.57:29,0,75	./.	./.	0/0:12,0:9:3.01:0,3,49	0/1:9,1:9:0:0,0,0	0/1:24,0:21:22.78:23,0,24	0/1:18,0:13:19.52:20,0,111	1/1:14,0:13:8.13:68,8,0	0/0:12,0:7:9.88:0,10,48	0/0:13,1:13:3.94:0,4,28	0/1:15,0:14:1.07:1,0,76	0/1:12,0:11:4:4,0,97	0/0:7,0:5:2.99:0,3,24	0/1:16,1:14:0.10:0,0,0	0/1:10,0:8:0:0,0,0	0/1:14,0:13:5.90:6,0,174	0/1:14,0:13:25.91:26,0,46	0/1:13,0:9:27.20:35,0,27	1/1:12,0:12:2.12:11,2,0	0/0:21,0:17:2.68:0,3,11	0/0:18,1:19:0.83:0,1,3	1/1:11,0:9:0.94:2,1,0	1/1:30,0:26:2.54:11,3,0	1/1:16,0:13:0.47:1,0,0	0/1:13,1:13:73.74:74,0,89	0/0:3,0:2:2.13:0,2,4	0/0:2,0:2:2.44:0,2,19
chr10	18966590	.	ACACG	A	565.28	PASS	AB=0.979;AC=36;AF=0.692;AN=52;BaseQRankSum=0.451;DP=336;FS=0.000;HRun=0;HaplotypeScore=95.2327;InbreedingCoeff=-0.1267;MQ=29.01;MQ0=36;MQRankSum=-1.115;QD=1.81;ReadPosRankSum=-0.016;VQSLOD=1.1775;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:15,0:11:12:12,0,42	0/1:7,1:6:25.82:50,0,26	./.	./.	0/1:11,0:8:0:0,0,0	0/0:11,0:10:0.72:0,1,2	0/1:25,0:21:24.57:25,0,29	0/1:17,0:9:17.25:81,0,17	1/1:15,0:14:6.72:41,7,0	0/1:11,0:6:26.77:42,0,27	0/0:12,0:11:0.94:0,1,2	0/1:14,0:13:8.92:29,0,9	0/1:10,2:11:22.48:91,0,22	1/1:7,1:5:2.92:25,3,0	1/1:16,0:13:0.44:1,0,0	0/1:10,0:7:0:0,0,0	1/1:10,1:10:5.48:63,5,0	0/1:14,0:12:10.26:10,0,109	0/1:11,0:6:12.56:13,0,30	1/1:8,0:8:2.63:10,3,0	1/1:18,1:14:2.99:24,3,0	1/1:18,0:18:0.07:9,0,0	1/1:10,0:8:0.94:2,1,0	1/1:27,0:23:0.75:2,1,0	1/1:17,0:15:3.21:15,3,0	1/1:9,1:9:14.32:91,14,0	1/1:4,0:3:5.85:46,6,0	0/1:2,0:2:0:0,0,0
chr10	18966592	.	ACG	A	680.07	PASS	AB=0.949;AC=36;AF=0.692;AN=52;BaseQRankSum=0.987;DP=325;FS=0.000;HRun=0;HaplotypeScore=86.3728;InbreedingCoeff=0.0193;MQ=28.03;MQ0=39;MQRankSum=-1.980;QD=2.42;ReadPosRankSum=0.537;VQSLOD=1.7678;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:15,0:11:1.29:1,0,42	1/1:7,0:5:6.27:58,6,0	./.	./.	0/0:4,6:7:0:0,0,0	0/0:10,0:9:0.69:0,1,2	0/1:23,1:20:20.88:21,0,22	0/1:17,0:9:19.18:82,0,19	1/1:15,0:14:7.22:33,7,0	0/1:10,1:6:15.29:92,0,15	0/0:10,3:12:0.47:0,0,1	1/1:13,0:12:8.46:54,8,0	0/1:6,4:9:16.50:91,0,17	1/1:7,0:4:3:25,3,0	1/1:16,0:13:0.45:1,0,0	0/1:11,0:7:0:0,0,0	1/1:8,1:8:10.15:83,10,0	0/1:14,0:11:16.06:16,0,88	0/1:9,0:4:14.06:14,0,18	1/1:8,0:8:2.90:8,3,0	1/1:19,0:13:2.99:24,3,0	1/1:17,0:17:2.78:20,3,0	0/0:11,0:8:2.84:0,3,9	1/1:27,0:23:0.43:2,0,0	1/1:17,0:14:3.66:18,4,0	1/1:9,0:8:12.74:85,13,0	1/1:3,1:3:5.88:51,6,0	1/1:2,0:2:2.99:23,3,0
chr10	18966612	.	ACACACGCGCG	A	698.37	PASS	AB=1.000;AC=24;AF=0.480;AN=50;BaseQRankSum=0.213;DP=282;FS=4.228;HRun=0;HaplotypeScore=83.5858;InbreedingCoeff=0.0714;MQ=24.65;MQ0=40;MQRankSum=-1.024;QD=4.08;ReadPosRankSum=1.272;VQSLOD=1.1325;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,0:6:3.01:52,3,0	0/0:8,0:6:2.58:0,3,21	./.	./.	0/0:13,0:10:0.47:0,0,1	1/1:6,1:6:3.83:20,4,0	1/1:21,1:16:5.94:110,6,0	1/1:7,0:2:3.01:35,3,0	1/1:16,0:13:7.34:86,7,0	0/1:10,0:6:38.30:60,0,38	0/0:13,0:12:0.94:0,1,2	0/1:13,0:12:2.09:11,0,2	0/1:10,0:8:36.71:55,0,37	1/1:12,0:10:2.69:19,3,0	1/1:15,0:12:0.57:1,1,0	0/0:9,0:6:1.03:0,1,2	0/1:5,0:3:15:39,0,15	0/1:11,0:6:77.77:78,0,205	0/0:6,0:1:2.60:0,3,10	0/0:4,1:5:0.65:0,1,1	./.	0/0:15,0:15:0.89:0,1,4	0/0:9,0:6:0.61:0,1,2	1/1:20,0:15:5.97:44,6,0	0/0:17,1:15:2.19:0,2,6	0/1:9,0:8:12.16:161,0,12	1/1:4,0:4:3.01:49,3,0	0/0:2,0:2:2.99:0,3,23
chr10	18966616	.	ACGCGCG	A	859.48	PASS	AB=0.878;AC=34;AF=0.739;AN=46;BaseQRankSum=0.532;DP=256;FS=0.000;HRun=0;HaplotypeScore=70.8809;InbreedingCoeff=0.1255;MQ=24.27;MQ0=40;MQRankSum=0.642;QD=4.05;ReadPosRankSum=-0.505;VQSLOD=1.4315;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,1:5:3.01:51,3,0	0/0:6,0:6:1.47:0,1,19	./.	./.	0/0:10,2:9:0.47:0,0,1	1/1:6,0:5:3.88:26,4,0	1/1:16,0:15:7.87:102,8,0	1/1:8,0:2:3.01:35,3,0	1/1:9,1:9:8.51:89,9,0	0/1:9,0:6:8.67:68,0,9	0/1:9,2:11:0:0,0,0	1/1:13,0:11:5.95:42,6,0	0/1:8,2:9:11.45:68,0,11	1/1:13,0:10:3:29,3,0	1/1:12,0:9:0.56:1,1,0	0/1:8,0:5:0.18:0,0,0	1/1:3,1:2:3.01:54,3,0	0/1:9,1:6:80.21:80,0,143	./.	0/0:4,0:4:0.42:0,0,0	./.	1/1:11,0:12:2.27:5,2,0	1/1:7,1:5:0.56:2,1,0	1/1:15,0:13:5.97:65,6,0	0/1:13,0:12:0.27:0,0,1	1/1:9,0:8:4.69:181,5,0	1/1:3,1:4:3.42:62,3,0	./.
chr10	18966617	.	CGCGCGCG	C	632.41	PASS	AB=0.978;AC=30;AF=0.652;AN=46;BaseQRankSum=1.464;DP=228;FS=0.000;HRun=0;HaplotypeScore=63.0388;InbreedingCoeff=-0.0651;MQ=24.00;MQ0=37;MQRankSum=-1.254;QD=3.72;ReadPosRankSum=0.641;VQSLOD=1.3660;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,0:4:4.56:35,5,0	0/1:8,0:6:35.27:35,0,39	./.	./.	0/0:12,0:9:2.80:0,3,6	1/1:6,0:5:2.99:63,3,0	1/1:15,0:10:0.61:22,1,0	1/1:6,0:1:2.88:15,3,0	0/1:9,0:6:8.14:52,0,8	0/1:10,0:6:22.66:23,0,77	./.	0/0:9,0:8:1.53:0,2,9	0/1:10,0:9:30.92:31,0,73	1/1:12,0:10:2.59:67,3,0	0/0:8,0:6:0.23:0,0,1	0/1:9,0:6:0.03:0,0,0	1/1:4,0:2:3:25,3,0	0/1:11,0:6:56.69:57,0,207	0/0:6,0:1:2.84:0,3,14	1/1:4,0:4:2.19:9,2,0	./.	1/1:6,3:9:2.70:40,3,0	1/1:8,0:5:1.36:3,1,0	1/1:15,0:11:5.93:87,6,0	0/1:14,0:12:0.05:1,0,0	0/1:7,1:7:29.18:148,0,29	1/1:4,0:4:2.37:33,2,0	./.
chr10	18966618	.	GCGCGCGCA	G	896.56	PASS	AB=0.970;AC=30;AF=0.652;AN=46;BaseQRankSum=0.406;DP=225;FS=0.000;HRun=0;HaplotypeScore=61.5262;InbreedingCoeff=0.1819;MQ=23.82;MQ0=36;MQRankSum=-0.294;QD=5.60;ReadPosRankSum=1.386;VQSLOD=1.1049;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,0:4:3.01:34,3,0	0/0:8,0:6:5.24:0,5,39	./.	./.	0/0:12,0:9:0.47:0,0,1	1/1:6,0:5:3.85:22,4,0	1/1:15,0:10:7.25:93,7,0	1/1:6,0:1:2.97:20,3,0	1/1:9,0:6:8.98:93,9,0	0/1:9,1:6:15.72:101,0,16	0/0:10,0:9:0.47:0,0,1	1/1:9,0:7:5.78:56,6,0	0/1:9,0:9:7.68:69,0,8	1/1:13,0:10:2.92:18,3,0	0/1:8,0:6:0.10:0,0,0	0/1:9,0:6:0:0,0,0	1/1:4,0:2:3.01:54,3,0	0/1:11,0:6:33.22:33,0,157	./.	0/0:4,0:4:0.47:0,0,1	./.	0/1:9,0:9:0.07:0,0,0	1/1:8,0:5:0.53:2,1,0	1/1:14,1:11:6.02:117,6,0	0/0:15,0:12:0.75:0,1,1	1/1:6,2:7:16.31:234,16,0	1/1:4,0:4:3.18:55,3,0	./.
chr10	18966619	.	CGCGCG	C	464.83	PASS	AB=0.974;AC=29;AF=0.659;AN=44;BaseQRankSum=1.988;DP=215;FS=0.000;HRun=0;HaplotypeScore=61.3014;InbreedingCoeff=-0.1146;MQ=23.93;MQ0=34;MQRankSum=-0.931;QD=2.80;ReadPosRankSum=0.701;VQSLOD=1.1152;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,0:4:4.56:31,5,0	0/1:7,1:6:18.23:18,0,27	./.	./.	0/0:10,0:7:2.44:0,2,6	1/1:6,0:5:3.01:50,3,0	0/1:15,0:10:6.28:29,0,6	1/1:5,0:1:0.47:1,0,0	0/1:9,0:6:14.09:27,0,14	0/1:10,0:6:20.11:20,0,62	./.	0/0:8,1:7:0.43:0,0,9	0/1:8,0:7:21.93:22,0,79	1/1:13,0:10:2.84:66,3,0	0/0:7,0:5:0.37:0,0,1	0/1:9,0:6:0:0,0,0	1/1:4,0:2:2.92:17,3,0	0/1:11,0:6:58.17:58,0,157	./.	1/1:3,0:4:2.34:9,2,0	./.	1/1:8,1:9:2.43:24,2,0	1/1:8,0:6:0.77:2,1,0	1/1:14,1:11:5.93:71,6,0	0/1:12,2:11:0.01:0,0,0	0/1:8,0:7:16.02:105,0,16	1/1:4,0:4:2.53:24,3,0	./.
chr10	18966622	.	GCGCA	G	394.89	PASS	AB=0.980;AC=29;AF=0.630;AN=46;BaseQRankSum=2.437;DP=224;FS=0.000;HRun=0;HaplotypeScore=62.4234;InbreedingCoeff=0.1834;MQ=23.71;MQ0=36;MQRankSum=0.149;QD=2.58;ReadPosRankSum=1.575;VQSLOD=0.7592;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,0:4:2.99:23,3,0	0/0:11,0:9:4.94:0,5,18	./.	./.	0/0:10,0:7:0:0,0,1	1/1:6,0:5:2.22:7,2,0	0/1:15,0:10:6.11:40,0,6	1/1:7,0:1:2.80:13,3,0	1/1:10,0:7:3.73:16,4,0	1/1:9,0:5:7.22:60,7,0	0/0:9,0:8:0.94:0,1,1	1/1:8,1:7:4.91:60,5,0	1/1:8,0:7:7.04:41,7,0	1/1:13,0:10:2.79:13,3,0	0/0:8,0:6:0.47:0,0,2	0/1:8,0:5:0:0,0,0	1/1:4,0:2:2.94:18,3,0	0/1:12,0:7:30.79:31,0,52	./.	0/0:4,0:4:0:0,0,1	./.	0/1:8,1:9:0.22:0,0,1	1/1:8,0:6:0.44:1,0,0	1/1:15,1:11:5.50:52,5,0	0/0:13,1:11:0:0,0,1	0/1:8,0:7:2.65:103,0,3	1/1:4,0:4:2.85:15,3,0	./.
chr10	18966624	.	GCA	G	62.76	PASS	AB=0.990;AC=16;AF=0.364;AN=44;BaseQRankSum=0.123;DP=247;FS=0.000;HRun=0;HaplotypeScore=66.3713;InbreedingCoeff=0.0466;MQ=23.47;MQ0=39;MQRankSum=-0.892;QD=0.45;ReadPosRankSum=1.323;VQSLOD=0.9929;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,0:5:2.74:12,3,0	0/1:12,0:10:5.45:5,0,28	./.	./.	0/1:10,0:7:0.01:0,0,0	0/0:6,0:5:1.55:0,2,4	1/1:16,0:10:1.77:12,2,0	0/0:8,0:2:3.84:0,4,21	0/0:10,0:7:5.10:0,5,21	0/1:12,0:8:15.12:15,0,31	0/0:10,0:9:0.94:0,1,2	0/1:10,1:9:11.86:37,0,12	0/1:9,0:8:1.37:1,0,20	1/1:14,0:10:1.48:5,1,0	0/0:9,0:7:0.47:0,0,1	0/1:9,0:6:0:0,0,0	./.	0/1:12,0:6:6.47:6,0,38	./.	0/0:6,0:6:0:0,0,1	./.	0/0:9,0:9:0:0,0,0	0/0:10,0:7:2.37:0,2,8	1/1:16,2:13:2.12:24,2,0	0/0:13,1:11:0:0,0,1	0/1:9,0:8:27.21:44,0,27	0/0:4,0:4:1.25:0,1,3	./.
chr10	18967251	.	ACGCGCGCG	A	860.15	PASS	AB=0.875;AC=30;AF=0.714;AN=42;BaseQRankSum=3.225;DP=253;FS=34.723;HRun=0;HaplotypeScore=59.2250;InbreedingCoeff=0.3884;MQ=21.36;MQ0=63;MQRankSum=-1.423;QD=5.24;ReadPosRankSum=0.597;VQSLOD=0.1206;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:11,1:6:1.25:3,1,0	1/1:1,0:1:2.97:20,3,0	./.	./.	0/1:7,0:6:0:1,0,0	1/1:4,0:1:1.25:3,1,0	0/1:25,0:11:0:0,0,0	./.	1/1:9,0:8:15.01:195,15,0	1/1:19,1:14:20.18:234,20,0	1/1:13,0:13:11.05:103,11,0	1/1:14,0:5:3.01:46,3,0	0/1:9,0:6:43.68:44,0,55	1/1:10,0:8:2.04:6,2,0	1/1:5,0:4:3.46:24,3,0	1/1:7,0:4:1.55:4,2,0	./.	0/0:16,0:13:19.98:0,20,547	./.	0/0:3,0:3:0.47:0,0,1	0/0:28,1:6:3.01:0,3,81	./.	1/1:3,0:3:0.89:2,1,0	./.	0/0:5,1:5:1.55:0,2,4	1/1:13,0:7:14.63:166,15,0	1/1:6,0:6:13.53:118,14,0	0/1:0,4:4:0:0,0,0
chr10	18967252	.	CGCGCGCG	C	910.56	PASS	AB=0.927;AC=28;AF=0.667;AN=42;BaseQRankSum=0.928;DP=242;FS=16.843;HRun=0;HaplotypeScore=54.6635;InbreedingCoeff=0.1589;MQ=21.15;MQ0=62;MQRankSum=-0.811;QD=5.87;ReadPosRankSum=-0.928;VQSLOD=-0.5213;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:11,1:6:2.68:11,3,0	1/1:1,0:1:1.25:3,1,0	./.	./.	1/1:7,0:6:0.47:1,0,0	1/1:4,0:1:0.47:1,0,0	0/1:21,0:8:0:0,0,0	./.	1/1:7,3:8:4.01:169,4,0	0/1:17,1:12:66.48:97,0,66	1/1:10,3:12:10.39:217,10,0	1/1:14,0:5:3.01:71,3,0	0/1:8,1:6:66.63:67,0,82	1/1:10,0:8:2.03:6,2,0	1/1:3,0:2:1.55:4,2,0	1/1:8,0:4:0.28:1,0,0	./.	0/0:15,0:12:20.28:0,20,673	./.	0/0:3,0:2:0.47:0,0,1	0/0:29,0:6:3.01:0,3,107	./.	1/1:2,0:3:0.47:1,0,0	./.	0/0:8,0:5:1.22:0,1,3	0/1:10,2:7:16.20:164,0,16	0/1:5,1:6:2.93:201,0,3	0/1:4,0:4:0:0,0,0
chr10	18967342	.	CGCG	C	174.07	PASS	AB=0.972;AC=19;AF=0.413;AN=46;BaseQRankSum=4.879;DP=282;FS=12.998;HRun=0;HaplotypeScore=72.4834;InbreedingCoeff=0.3727;MQ=23.23;MQ0=49;MQRankSum=-1.787;QD=1.55;ReadPosRankSum=-0.473;VQSLOD=0.3865;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:11,0:4:0.41:0,0,1	./.	0/0:15,0:1:3.01:0,3,36	0/0:12,0:3:6.02:0,6,103	0/1:10,1:8:0:0,0,0	1/1:10,2:9:4.69:33,5,0	0/0:11,0:4:3.01:0,3,70	./.	0/0:8,0:5:2.94:0,3,19	0/1:15,1:10:40.93:41,0,88	1/1:7,0:7:0.47:1,0,0	0/0:12,0:10:5.55:0,6,42	0/0:7,0:7:8.95:0,9,95	0/1:5,0:4:0:0,0,0	0/1:3,0:1:0:0,0,0	0/0:11,0:9:9.01:0,9,168	1/1:9,1:5:2.74:63,3,0	0/0:27,0:24:41.88:0,42,936	0/0:4,0:2:2.37:0,2,8	1/1:6,2:6:1.82:6,2,0	./.	1/1:5,3:7:7.75:85,8,0	1/1:10,2:10:1.80:27,2,0	./.	1/1:7,2:8:2.96:37,3,0	0/0:11,0:8:15.87:0,16,146	0/0:4,0:4:1.30:0,1,44	./.
chr10	18967347	.	ACG	A	129.87	PASS	AB=0.958;AC=21;AF=0.457;AN=46;BaseQRankSum=4.696;DP=291;FS=7.823;HRun=0;HaplotypeScore=74.3463;InbreedingCoeff=0.2841;MQ=23.05;MQ0=52;MQRankSum=-1.664;QD=0.95;ReadPosRankSum=0.025;VQSLOD=-0.0496;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:10,0:4:0.02:0,0,0	./.	0/0:15,0:1:3.01:0,3,43	0/0:13,0:3:6.02:0,6,99	0/1:8,1:7:0:0,0,0	1/1:12,2:10:3.11:9,3,0	0/0:13,0:5:2.94:0,3,18	0/0:3,0:1:2.50:0,2,9	1/1:8,0:5:0.89:2,1,0	0/1:17,1:12:5.22:105,0,5	0/1:7,0:7:0.01:0,0,0	0/0:12,0:11:2.11:0,2,6	0/0:7,0:7:4.23:0,4,42	./.	0/1:4,0:3:0:0,0,0	0/0:11,1:7:5.70:0,6,106	1/1:9,1:6:2.36:26,2,0	0/0:27,0:25:32.84:0,33,435	1/1:5,0:2:2.37:8,2,0	1/1:6,2:6:1.55:5,2,0	./.	1/1:5,3:7:7.24:44,7,0	0/1:10,2:10:0.55:6,0,1	./.	1/1:8,2:9:2.96:27,3,0	0/1:13,0:10:11.22:11,0,62	0/0:4,0:4:0.23:0,0,15	./.
chr10	18967363	.	GCA	G	60.55	PASS	AB=0.929;AC=13;AF=0.241;AN=54;BaseQRankSum=1.161;DP=367;FS=5.374;HRun=0;HaplotypeScore=96.9745;InbreedingCoeff=0.2283;MQ=23.35;MQ0=68;MQRankSum=-0.798;QD=0.40;ReadPosRankSum=-1.605;VQSLOD=1.4465;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:14,1:7:0.02:0,0,0	0/1:9,0:6:0:0,0,0	0/0:11,0:1:2.97:0,3,20	0/0:13,0:3:8.81:0,9,62	0/1:11,2:12:0:0,0,0	0/0:15,0:9:0.14:0,0,16	0/0:14,0:4:2.88:0,3,15	0/0:3,0:1:0:0,0,0	1/1:10,0:8:0.34:1,0,0	0/1:30,4:25:34.67:121,0,35	0/1:7,2:10:0.04:0,0,0	0/1:14,0:9:0.02:0,0,0	0/0:9,0:8:0.47:0,0,1	1/1:11,0:10:2:5,2,0	./.	0/0:14,0:8:5.75:0,6,54	0/0:11,0:8:0.47:0,0,1	0/0:26,0:24:20.02:0,20,195	0/0:13,0:4:5.97:0,6,51	1/1:12,0:8:1.55:5,2,0	0/0:27,0:5:0:0,0,0	0/0:9,0:8:3.10:0,3,31	0/0:11,0:9:4.75:0,5,24	0/0:13,0:7:0:0,0,0	0/0:10,0:9:1.43:0,1,4	0/1:20,1:17:16.57:17,0,169	0/0:3,0:3:5.04:0,5,35	0/0:6,0:4:2.93:0,3,38
chr10	18967373	.	ACG	A	593.81	PASS	AB=0.849;AC=35;AF=0.648;AN=54;BaseQRankSum=3.652;DP=378;FS=14.899;HRun=0;HaplotypeScore=91.8819;InbreedingCoeff=0.1276;MQ=23.38;MQ0=72;MQRankSum=-2.199;QD=1.97;ReadPosRankSum=1.510;VQSLOD=0.9197;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:17,2:8:0.02:0,0,0	0/1:2,5:6:0:0,0,0	1/1:10,0:1:2.04:6,2,0	0/1:12,0:3:1.46:1,0,4	0/1:11,3:14:0:0,0,0	1/1:15,0:8:1.53:4,2,0	0/0:15,0:3:3.01:0,3,33	1/1:4,0:1:2.97:20,3,0	1/1:9,1:9:6.23:35,6,0	1/1:29,4:27:40.01:321,40,0	0/1:4,1:7:0:0,0,0	1/1:16,0:11:5.83:38,6,0	1/1:4,2:5:5.87:35,6,0	1/1:11,3:13:0.21:26,0,0	./.	0/1:10,0:5:3.54:4,0,18	1/1:14,0:8:2.30:17,2,0	0/1:23,0:22:0.96:1,0,161	0/1:12,0:4:8.67:15,0,9	1/1:12,0:8:1.55:5,2,0	0/0:30,0:7:0:0,0,0	1/1:8,0:7:1.58:5,2,0	0/0:12,0:10:1.71:0,2,5	0/0:13,0:7:0:0,0,0	1/1:14,0:13:2.77:16,3,0	0/1:17,4:17:56.12:137,0,56	0/1:4,0:4:2.87:8,0,3	0/1:3,3:4:12.94:13,0,37
chr10	18967374	.	CGCG	C	136.11	PASS	AB=0.985;AC=23;AF=0.442;AN=52;BaseQRankSum=5.181;DP=372;FS=10.489;HRun=0;HaplotypeScore=94.0428;InbreedingCoeff=0.2667;MQ=23.31;MQ0=73;MQRankSum=-0.049;QD=0.66;ReadPosRankSum=-4.804;VQSLOD=-0.5138;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:8:0.46:1,0,0	./.	0/0:10,0:1:1.55:0,2,4	0/0:12,0:3:6.02:0,6,88	1/1:13,0:12:1.25:3,1,0	1/1:15,0:8:2.75:7,3,0	0/0:15,0:3:3.01:0,3,69	1/1:5,0:1:0.47:1,0,0	0/0:10,0:9:2.59:0,3,15	0/1:33,3:26:99:163,0,206	1/1:7,0:7:1.72:4,2,0	1/1:16,0:11:0.62:2,1,0	1/1:5,1:5:1.61:32,2,0	0/1:15,0:13:8.73:18,0,9	./.	0/0:11,0:5:8.86:0,9,109	0/0:14,0:8:2.03:0,2,5	0/0:23,0:22:32.29:0,32,449	0/0:12,0:4:3.80:0,4,61	1/1:12,0:8:2.50:7,3,0	0/1:30,0:7:0:0,0,0	0/1:8,0:7:3.31:5,0,3	1/1:10,1:9:0.98:3,1,0	0/1:13,0:7:0:0,0,0	0/0:11,2:12:0.23:0,0,2	0/0:21,0:17:9.79:0,10,208	0/0:4,0:4:5.79:0,6,40	0/0:6,0:4:1.66:0,2,71
chr10	18967399	.	ACG	A	1243.47	PASS	AB=0.993;AC=37;AF=0.771;AN=48;BaseQRankSum=3.783;DP=527;FS=22.664;HRun=0;HaplotypeScore=144.7883;InbreedingCoeff=0.0621;MQ=24.25;MQ0=103;MQRankSum=-0.777;QD=2.53;ReadPosRankSum=-2.375;VQSLOD=0.1373;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:25,1:13:0.18:0,0,0	0/1:9,0:7:0:0,0,0	./.	./.	0/1:21,0:20:0.16:1,0,0	1/1:21,0:12:2.80:7,3,0	0/1:23,0:9:11.05:12,0,11	0/1:47,0:21:13.46:118,0,13	1/1:15,0:11:5.71:32,6,0	1/1:41,3:31:62.19:466,62,0	1/1:7,2:9:0.45:1,0,0	./.	1/1:10,0:8:8.10:43,8,0	1/1:22,0:16:11.66:48,12,0	0/1:11,0:9:0:0,0,0	1/1:17,0:7:1.46:41,1,0	1/1:21,0:12:5.37:37,5,0	0/1:30,0:26:13.51:14,0,202	1/1:12,13:15:25.69:179,26,0	1/1:19,0:14:4.72:14,5,0	0/1:38,0:11:0:0,0,0	1/1:12,0:10:4.76:23,5,0	1/1:14,0:11:0.89:3,1,0	./.	1/1:14,0:11:4.08:18,4,0	0/1:26,1:24:23.02:194,0,23	0/1:9,0:8:1.06:64,0,1	0/1:8,0:6:0.56:30,0,1
chr10	18967404	.	C	CATGT	122.77	PASS	AB=0.983;AC=11;AF=0.220;AN=50;BaseQRankSum=2.614;DP=553;FS=3.834;HRun=0;HaplotypeScore=164.8587;InbreedingCoeff=0.2753;MQ=24.33;MQ0=113;MQRankSum=0.518;QD=0.66;ReadPosRankSum=2.055;VQSLOD=2.5140;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:14:3.44:0,3,21	0/1:9,0:7:0:0,0,0	./.	./.	1/1:23,0:22:0.14:0,0,0	0/1:20,0:12:0:0,0,0	0/1:25,0:10:13.03:13,0,13	0/0:50,0:23:63.58:0,64,704	0/0:16,0:12:11.16:0,11,79	0/1:44,3:34:99:154,0,832	0/0:9,0:9:0:0,0,0	0/1:17,0:10:0:0,0,0	0/1:9,1:8:44.81:45,0,70	0/0:25,0:18:9.19:0,9,80	0/1:12,0:10:0:0,0,0	0/0:18,0:9:15.03:0,15,203	0/0:23,0:14:5.30:0,5,42	0/0:31,0:27:39.13:0,39,723	0/0:27,0:15:28.21:0,28,345	0/0:19,0:14:0.32:0,0,1	0/0:40,0:12:0:0,0,0	0/1:12,0:10:0:0,0,0	0/1:12,0:9:0:0,0,0	./.	0/0:17,0:14:0:0,0,1	0/0:25,0:21:48.15:0,48,698	0/0:9,0:8:15.05:0,15,214	0/0:7,0:6:9.03:0,9,139
chr10	18967419	.	G	GCA	115.51	PASS	AB=0.998;AC=26;AF=0.500;AN=52;BaseQRankSum=4.142;DP=601;FS=9.605;HRun=0;HaplotypeScore=168.7589;InbreedingCoeff=0.3278;MQ=30.62;MQ0=105;MQRankSum=-3.315;QD=0.27;ReadPosRankSum=-1.910;VQSLOD=1.9170;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:14:0:0,0,0	0/1:7,0:7:0:0,0,0	0/0:15,0:1:2.98:0,3,22	0/0:22,0:9:0.02:0,0,95	0/1:23,0:21:0.25:0,0,0	0/1:20,0:14:0:0,0,0	0/1:26,0:13:0:0,0,0	1/1:50,0:27:18.15:56,18,0	0/0:16,0:13:2.61:0,3,12	1/1:47,0:37:5.53:40,6,0	0/1:11,0:10:0:0,0,0	0/0:18,0:12:0.38:0,0,1	0/0:14,0:12:0.83:0,1,2	1/1:28,0:21:3.69:18,4,0	0/0:16,0:14:0.47:0,0,1	0/0:26,0:16:18.05:0,18,221	1/1:18,8:18:1.61:16,2,0	0/1:32,0:28:14.18:14,0,337	1/1:17,0:6:1.53:5,2,0	0/1:16,0:14:0:0,0,0	./.	0/1:13,0:10:0:0,0,0	./.	0/1:14,0:11:0:0,0,0	0/1:18,0:14:0.01:0,0,0	0/1:24,0:20:0.52:1,0,1	1/1:13,0:12:6.87:42,7,0	1/1:14,0:13:2.99:26,3,0
chr10	18967929	.	TG	T	1689.74	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.571;DP=716;FS=1.610;HRun=7;HaplotypeScore=71.6465;InbreedingCoeff=0.9983;MQ=87.65;MQ0=0;MQRankSum=-4.478;QD=23.80;ReadPosRankSum=2.162;VQSLOD=4.0099;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,49:53:99:1383,137,0	0/0:11,0:11:30.10:0,30,374	0/0:33,0:33:65.82:0,66,1044	0/0:26,0:26:52.98:0,53,643	0/0:31,0:31:78.25:0,78,980	0/0:23,0:22:66.21:0,66,830	0/0:22,0:22:63.20:0,63,793	0/0:29,0:29:69.21:0,69,854	1/1:4,14:18:42.09:429,42,0	0/0:30,0:30:63.19:0,63,770	0/0:12,0:12:24.07:0,24,291	0/0:19,0:19:54.15:0,54,653	0/0:23,1:24:41.57:0,42,816	0/0:25,0:25:66.20:0,66,809	0/0:31,0:31:81.25:0,81,1008	0/0:18,0:18:48.15:0,48,602	0/0:34,0:34:87.26:0,87,1075	0/0:19,1:20:29.58:0,30,685	0/0:21,0:21:54.17:0,54,679	0/0:22,0:22:54.12:0,54,639	0/0:60,0:60:99:0,162,1992	0/0:26,0:26:72.20:0,72,879	0/0:19,0:19:42.13:0,42,523	0/0:24,0:24:57.18:0,57,717	0/0:21,0:20:48.15:0,48,593	0/0:22,0:22:60.19:0,60,749	0/0:26,0:26:69.19:0,69,852	0/0:16,0:16:48.15:0,48,604
chr10	18968538	.	C	CGT	798.45	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=0.287;DP=645;FS=2.775;HRun=0;HaplotypeScore=160.1322;InbreedingCoeff=0.9087;MQ=62.38;MQ0=4;MQRankSum=-2.539;QD=22.18;ReadPosRankSum=0.452;VQSLOD=4.2862;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:45:99:0,126,1586	0/0:12,0:12:36.05:0,36,493	0/0:15,0:7:15:0,15,165	0/0:24,0:11:26.49:0,26,307	0/0:18,0:18:48.12:0,48,662	0/0:18,0:18:36.11:0,36,638	0/0:38,0:38:99:0,99,1318	0/0:20,0:20:53.99:0,54,689	0/0:18,0:17:48.02:0,48,664	0/0:24,0:24:59.95:0,60,700	0/0:16,0:16:42.11:0,42,558	0/0:29,0:29:77.97:0,78,1099	0/0:25,0:25:63.15:0,63,888	0/0:23,0:23:60.04:0,60,816	0/0:20,0:19:57.16:0,57,830	1/1:10,9:18:42.10:613,42,0	0/0:30,0:30:84.09:0,84,1094	1/1:9,8:16:4.05:295,4,0	0/0:17,0:17:50.95:0,51,601	0/0:18,0:18:39.11:0,39,534	0/0:54,0:54:99:0,129,1698	0/0:20,0:20:51.06:0,51,644	0/0:10,0:10:27.05:0,27,380	0/0:39,0:39:93.13:0,93,1291	0/0:13,0:13:27.02:0,27,361	0/0:26,0:25:65.89:0,66,759	0/0:21,0:21:63.07:0,63,844	0/0:15,0:15:45.01:0,45,606
chr10	18968561	.	G	GCA	7267.75	PASS	AB=0.645;AC=18;AF=0.321;AN=56;BaseQRankSum=-7.762;DP=738;FS=8.578;HRun=0;HaplotypeScore=140.0873;InbreedingCoeff=0.2663;MQ=58.23;MQ0=11;MQRankSum=-0.827;QD=19.08;ReadPosRankSum=2.827;VQSLOD=4.6258;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:24.39:0,24,711	0/0:15,0:15:39.06:0,39,438	0/0:30,0:8:19.72:0,20,165	0/0:30,0:7:8.73:0,9,103	0/0:15,0:15:30.04:0,30,330	1/1:6,9:16:21.07:336,21,0	0/1:14,19:34:47.10:441,0,47	0/1:23,9:31:11.71:663,0,12	0/0:27,0:26:53.94:0,54,615	0/0:24,0:24:51.05:0,51,560	0/0:15,0:15:32.98:0,33,338	0/1:12,19:31:10.73:488,0,11	0/0:27,0:27:62.21:0,62,675	0/0:28,0:29:68.73:0,69,693	0/1:14,10:23:48.07:659,0,48	0/1:8,8:16:40.85:353,0,41	0/0:29,0:29:60.04:0,60,656	0/1:8,11:21:22.05:259,0,22	0/1:16,11:27:1.41:338,0,1	1/1:1,11:12:26.68:394,27,0	0/1:15,45:59:50.44:1201,0,50	0/1:5,14:19:72.88:350,0,73	1/1:4,9:13:17.59:287,18,0	1/1:14,38:54:25.20:1053,25,0	0/1:3,19:21:2.21:446,0,2	0/0:21,0:22:62.66:0,63,661	0/0:26,0:27:62.83:0,63,684	0/0:23,0:23:41.12:0,41,464
chr10	18969086	.	ACAGT	A	1338.72	PASS	AB=0.765;AC=8;AF=0.154;AN=52;BaseQRankSum=8.288;DP=791;FS=0.000;HRun=0;HaplotypeScore=177.3046;InbreedingCoeff=0.0987;MQ=68.32;MQ0=4;MQRankSum=-6.872;QD=11.06;ReadPosRankSum=-1.449;VQSLOD=2.9326;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:40:74.86:0,75,1978	0/1:6,5:11:99:118,0,296	0/0:59,0:41:99:0,113,2234	0/0:72,0:48:75.65:0,76,1380	./.	0/0:13,1:14:33.11:0,33,875	0/0:36,0:36:89.75:0,90,2216	0/0:34,0:34:95.11:0,95,2337	0/0:31,2:36:75.18:0,75,1934	0/1:17,2:18:77.57:78,0,696	0/0:7,2:9:6.02:0,6,162	0/0:30,0:31:34.67:0,35,1566	0/1:12,1:13:71.44:91,0,71	1/1:7,7:11:18.06:340,18,0	0/0:34,1:34:72.25:0,72,1864	0/0:33,0:30:72.20:0,72,1877	0/1:12,13:21:91.91:308,0,92	0/0:23,0:23:57.15:0,57,1476	0/0:20,0:18:48.15:0,48,1168	0/0:26,0:26:66.18:0,66,1611	0/0:47,0:47:99:0,114,2848	0/0:31,1:32:81.26:0,81,1991	0/0:25,0:25:63.22:0,63,1676	0/0:47,1:52:67.66:0,68,2469	0/0:15,0:14:36.10:0,36,788	0/1:9,5:12:99:152,0,225	0/1:12,12:22:85.89:390,0,86	./.
chr10	18969182	.	AGAGATG	A	35.29	PASS	AB=0.978;AC=7;AF=0.125;AN=56;BaseQRankSum=5.427;DP=971;FS=1.634;HRun=0;HaplotypeScore=203.5514;InbreedingCoeff=0.0005;MQ=31.60;MQ0=103;MQRankSum=-4.410;QD=0.21;ReadPosRankSum=-1.392;VQSLOD=2.8491;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:41,1:28:2.38:23,2,0	0/0:27,0:17:19.23:0,19,258	0/0:21,0:5:5.23:0,5,47	0/0:15,0:5:8.12:0,8,40	0/0:53,0:39:20.94:0,21,487	0/0:20,0:13:7.84:0,8,86	0/1:34,0:11:9.98:10,0,34	0/0:20,0:5:12.01:0,12,145	0/0:34,0:24:12.02:0,12,195	0/0:53,0:32:63.86:0,64,1086	0/0:33,0:25:3.09:0,3,150	0/1:15,0:11:14.71:30,0,15	0/0:69,1:57:28.75:0,29,780	0/0:53,0:37:14.91:0,15,569	0/1:40,3:29:47.57:48,0,504	0/0:31,0:22:33.07:0,33,562	0/0:74,2:53:19.01:0,19,678	0/0:29,1:24:27.90:0,28,516	0/0:11,0:8:9.44:0,9,262	0/0:15,1:13:7.36:0,7,119	0/0:34,0:20:0.04:0,0,234	0/1:20,1:16:34.19:34,0,132	0/0:14,0:10:11.96:0,12,145	0/0:50,2:39:9.70:0,10,162	0/0:10,0:6:6.01:0,6,78	0/0:58,0:47:21.38:0,21,2036	0/0:68,0:49:31.50:0,31,857	0/1:16,0:13:9.96:10,0,164
chr10	18969326	.	GGAGACA	G	335.72	PASS	AB=0.986;AC=15;AF=0.278;AN=54;BaseQRankSum=1.090;DP=1096;FS=3.328;HRun=0;HaplotypeScore=201.6227;InbreedingCoeff=-0.2761;MQ=28.75;MQ0=239;MQRankSum=-0.115;QD=0.63;ReadPosRankSum=-3.890;VQSLOD=1.6638;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:52,2:29:40.08:40,0,50	0/0:22,1:15:5.95:0,6,85	0/0:41,0:11:5.71:0,6,80	0/0:38,0:10:13.39:0,13,167	0/1:38,2:26:10.50:11,0,68	0/1:24,0:12:20.19:20,0,45	0/0:40,0:22:2.94:0,3,57	0/0:35,0:2:2.98:0,3,21	0/1:43,0:34:10.61:11,0,125	0/1:52,2:23:57.10:57,0,142	0/0:33,3:20:3:0,3,25	0/1:34,0:25:44.14:44,0,104	0/0:60,0:39:9.92:0,10,72	0/0:47,0:32:3.76:0,4,34	0/0:43,0:28:8.42:0,8,285	./.	0/1:70,1:48:45.40:45,0,66	1/1:20,1:13:0.03:2,0,0	0/0:30,0:9:6.02:0,6,115	0/1:31,0:20:41.73:42,0,49	1/1:39,0:24:5.37:35,5,0	0/1:37,0:30:21.50:22,0,79	0/1:24,0:16:40.97:64,0,41	0/0:44,0:34:0.15:0,0,46	0/0:24,0:18:6.01:0,6,85	0/1:59,1:30:80.02:80,0,145	0/0:60,0:46:1.29:0,1,18	0/0:9,0:5:3.01:0,3,58
chr10	18969445	.	TGGAGACA	T	619.35	PASS	AB=0.958;AC=13;AF=0.250;AN=52;BaseQRankSum=3.802;DP=1373;FS=4.424;HRun=0;HaplotypeScore=164.8614;InbreedingCoeff=-0.1685;MQ=19.65;MQ0=677;MQRankSum=-2.283;QD=0.89;ReadPosRankSum=2.700;VQSLOD=2.4919;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,1:17:17.61:0,18,270	0/0:34,0:15:21.94:0,22,348	./.	./.	0/0:69,2:25:3.01:0,3,45	0/0:34,0:7:6.02:0,6,140	1/1:36,3:12:2.76:48,3,0	0/0:39,0:1:3.01:0,3,45	0/1:45,0:19:14.38:14,0,92	0/1:103,3:25:33.91:34,0,1137	0/0:47,1:21:14.68:0,15,242	0/0:45,0:18:12.88:0,13,308	0/1:77,4:40:99:176,0,389	0/1:71,4:36:48.12:48,0,429	0/0:60,0:22:8.64:0,9,208	0/1:45,1:9:65.75:66,0,334	0/0:76,2:41:31.25:0,31,503	0/1:57,2:19:45.89:46,0,591	0/1:24,2:8:68.80:69,0,260	0/0:35,2:21:4.25:0,4,99	1/1:58,10:18:0.21:32,0,0	0/0:29,1:13:9.50:0,10,222	0/0:28,1:14:3.01:0,3,95	0/0:54,2:23:4.82:0,5,50	0/0:27,0:14:5.60:0,6,122	0/1:74,3:23:53.80:54,0,1120	0/1:67,1:30:99:170,0,397	0/0:12,0:6:5.81:0,6,58
chr10	18969464	.	GGAGACA	G	187.59	PASS	AB=0.975;AC=14;AF=0.292;AN=48;BaseQRankSum=3.416;DP=1268;FS=0.000;HRun=0;HaplotypeScore=112.4628;InbreedingCoeff=-0.0299;MQ=15.51;MQ0=751;MQRankSum=-1.042;QD=0.31;ReadPosRankSum=0.297;VQSLOD=2.0964;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,2:12:6.14:0,6,24	0/0:29,0:6:3.90:0,4,71	./.	./.	./.	0/0:32,0:3:3.01:0,3,60	0/1:44,0:13:6.85:7,0,101	./.	0/1:43,1:14:22.16:22,0,47	0/1:93,4:21:70.92:71,0,981	0/1:43,2:19:0.23:0,0,0	0/0:40,0:11:8.72:0,9,134	0/1:74,1:31:7.07:7,0,76	0/0:65,3:18:0:0,0,0	0/0:57,1:16:2.82:0,3,102	0/0:50,0:7:11.93:0,12,297	0/0:64,1:23:3.33:0,3,139	0/1:55,1:8:14.22:14,0,76	0/0:19,0:4:5.99:0,6,125	0/0:41,0:21:1.91:0,2,5	1/1:63,2:16:2.06:12,2,0	0/0:29,0:11:0.47:0,0,1	0/0:32,0:15:0.88:0,1,2	0/0:50,0:14:2.89:0,3,25	1/1:25,0:12:1.82:5,2,0	0/1:77,2:12:36.45:36,0,709	0/1:70,3:22:63.28:63,0,161	1/1:10,1:2:3.01:67,3,0
chr10	18969476	.	AGAGATG	A	106.85	PASS	AB=0.992;AC=9;AF=0.180;AN=50;BaseQRankSum=3.646;DP=1316;FS=0.000;HRun=0;HaplotypeScore=101.0554;InbreedingCoeff=0.1229;MQ=14.39;MQ0=838;MQRankSum=-0.199;QD=0.33;ReadPosRankSum=1.140;VQSLOD=1.8248;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:12:9.59:0,10,79	0/0:30,3:5:3.01:0,3,101	./.	./.	0/0:67,0:23:0:0,0,0	0/0:31,0:3:3.01:0,3,80	0/0:50,0:14:9.46:0,9,193	./.	0/1:41,1:13:54.50:54,0,113	0/0:110,0:23:22.13:0,22,1329	0/1:47,0:19:0.10:0,0,0	0/0:39,0:10:8.52:0,9,138	0/1:68,0:22:47.76:48,0,68	0/0:66,0:12:0.47:0,0,1	0/0:63,0:16:2.78:0,3,105	0/0:57,0:8:9.03:0,9,236	0/0:68,0:23:9.87:0,10,208	0/1:52,1:7:35.91:40,0,36	0/0:16,0:3:3.01:0,3,106	0/0:41,0:23:10.62:0,11,84	0/0:66,0:11:0.89:0,1,3	0/0:32,0:12:1.25:0,1,3	0/0:33,0:15:4.24:0,4,23	0/0:57,0:13:2.22:0,2,7	1/1:26,0:13:1.82:5,2,0	0/0:84,0:14:18.46:0,18,989	0/1:70,0:19:44.48:44,0,215	1/1:13,0:3:3:26,3,0
chr10	18969541	.	TGGAGACA	T	54.08	PASS	AB=0.963;AC=7;AF=0.175;AN=40;BaseQRankSum=3.508;DP=1025;FS=0.000;HRun=0;HaplotypeScore=54.4635;InbreedingCoeff=0.1887;MQ=11.97;MQ0=719;MQRankSum=1.806;QD=0.26;ReadPosRankSum=0.045;VQSLOD=1.4166;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:46,1:6:0.11:0,0,0	0/0:20,0:4:1.49:0,1,103	./.	./.	./.	0/0:14,0:1:2.94:0,3,18	0/0:40,1:5:3.01:0,3,45	0/0:47,0:5:15.02:0,15,314	0/0:33,0:7:3.01:0,3,108	0/1:77,2:14:99:123,0,848	0/0:32,1:8:0:0,0,0	0/0:30,0:1:3.01:0,3,81	0/0:52,3:11:3.90:0,4,47	0/0:41,2:8:0:0,0,0	./.	./.	0/0:51,1:17:6.02:0,6,127	1/1:32,0:6:1.14:3,1,0	0/0:17,0:3:6.02:0,6,246	0/0:36,0:12:3.62:0,4,118	./.	./.	0/1:26,2:10:0.10:1,0,0	./.	1/1:20,2:8:1.82:5,2,0	0/0:68,0:13:33.06:0,33,741	0/0:41,0:7:3.01:0,3,96	0/0:14,0:3:3.01:0,3,118
chr10	18969572	.	AGTGATG	A	183.31	PASS	AB=0.907;AC=12;AF=0.375;AN=32;BaseQRankSum=1.115;DP=526;FS=0.000;HRun=0;HaplotypeScore=24.0751;InbreedingCoeff=0.1858;MQ=10.15;MQ0=389;MQRankSum=0.702;QD=1.33;ReadPosRankSum=-1.115;VQSLOD=0.9680;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	0/1:8,0:3:43.23:43,0,101	./.	./.	./.	./.	./.	0/0:30,0:1:3.01:0,3,100	1/1:25,2:5:3.01:66,3,0	0/0:16,0:2:6.02:0,6,107	./.	0/0:16,3:1:0:0,0,0	0/1:25,3:5:0:0,0,0	0/1:10,1:2:0.13:0,0,0	./.	./.	1/1:22,3:7:2.92:17,3,0	1/1:14,1:2:3.01:38,3,0	0/0:9,1:2:3.01:0,3,110	0/0:14,0:2:0:0,0,0	./.	./.	0/0:12,0:5:1.63:0,2,104	./.	0/0:19,0:6:5.75:0,6,119	0/0:25,1:4:4.26:0,4,113	0/1:13,4:3:61.05:68,0,61	1/1:5,2:2:3.01:49,3,0
chr10	18970839	.	CACG	C	2480.50	PASS	AB=1.000;AC=33;AF=0.589;AN=56;BaseQRankSum=6.162;DP=466;FS=11.105;HRun=0;HaplotypeScore=89.7298;InbreedingCoeff=0.4914;MQ=79.20;MQ0=1;MQRankSum=-1.368;QD=10.51;ReadPosRankSum=6.464;VQSLOD=1.9339;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:23:47.98:440,48,0	1/1:5,0:5:9:93,9,0	0/0:19,0:17:20.16:0,20,242	0/0:31,0:29:36.75:0,37,426	1/1:4,5:9:6.02:69,6,0	0/1:14,0:14:8.43:8,0,28	0/0:26,0:26:4.77:0,5,147	0/0:22,0:22:2.25:0,2,125	1/1:3,6:9:5.97:45,6,0	1/1:3,9:12:26.99:321,27,0	1/1:1,4:5:6.02:68,6,0	0/1:14,0:14:6.27:6,0,30	1/1:2,11:13:2.75:43,3,0	1/1:5,9:14:3.01:44,3,0	0/0:22,0:22:14.03:0,14,139	1/1:14,0:14:24.05:308,24,0	1/1:18,0:18:47.92:557,48,0	1/1:4,13:17:6.02:89,6,0	0/0:18,0:17:6.12:0,6,101	0/1:9,0:9:2.61:3,0,34	0/0:50,0:49:2.27:0,2,211	0/0:12,0:12:12.59:0,13,95	0/1:12,0:12:1.14:1,0,70	0/0:30,0:30:28.17:0,28,254	0/1:20,0:20:9.67:10,0,34	1/1:13,1:14:24.07:311,24,0	1/1:2,1:3:3.01:43,3,0	1/1:11,0:11:23.91:205,24,0
chr10	18970873	.	ATGG	A	506.02	PASS	AB=0.967;AC=20;AF=0.417;AN=48;BaseQRankSum=0.460;DP=456;FS=3.177;HRun=0;HaplotypeScore=90.7100;InbreedingCoeff=0.6131;MQ=48.18;MQ0=59;MQRankSum=2.541;QD=1.95;ReadPosRankSum=2.527;VQSLOD=1.7265;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:20:23.47:0,23,183	./.	./.	./.	./.	1/1:15,0:13:4.67:30,5,0	1/1:29,0:21:7.57:54,8,0	0/1:26,0:17:0:0,0,0	0/0:8,0:7:2.94:0,3,18	0/0:16,0:12:13.03:0,13,88	0/0:7,0:5:2.73:0,3,23	1/1:15,0:14:16.76:133,17,0	0/0:11,0:11:3.01:0,3,49	0/0:14,0:14:22.99:0,23,196	1/1:21,0:16:10.97:51,11,0	0/0:14,0:13:19.83:0,20,223	0/0:15,0:15:16.99:0,17,187	0/0:11,0:11:11.45:0,11,97	0/1:20,0:10:13.99:21,0,14	1/1:10,0:7:3.05:25,3,0	1/1:62,0:47:23.35:158,23,0	0/0:8,6:10:2.37:0,2,9	1/1:14,0:12:5.86:37,6,0	1/1:25,0:24:21.11:131,21,0	1/1:20,0:17:5.13:32,5,0	0/0:16,0:12:9.01:0,9,83	0/0:5,0:4:2.99:0,3,23	0/0:7,0:6:13:0,13,84
chr10	18971244	.	A	ATG	3119.71	PASS	AB=0.993;AC=29;AF=0.518;AN=56;BaseQRankSum=6.203;DP=658;FS=5.083;HRun=0;HaplotypeScore=112.7382;InbreedingCoeff=0.6090;MQ=54.97;MQ0=25;MQRankSum=-7.334;QD=7.82;ReadPosRankSum=-8.804;VQSLOD=0.6211;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:35,0:35:24.81:25,0,262	0/1:9,0:9:23.21:40,0,23	0/0:15,0:8:9.03:0,9,112	0/0:15,0:6:12.04:0,12,150	0/0:20,0:20:57.17:0,57,699	1/1:22,1:21:24.16:229,24,0	1/1:26,1:27:8.31:91,8,0	1/1:15,28:42:48.87:1132,49,0	0/1:31,0:31:64.76:65,0,440	0/0:31,0:31:90.08:0,90,1082	0/0:22,0:22:57.12:0,57,679	1/1:21,0:22:27.17:258,27,0	0/0:17,0:17:42.07:0,42,481	0/0:26,0:26:66.21:0,66,823	1/1:21,1:21:21.25:142,21,0	1/1:21,1:20:8.68:177,9,0	0/0:41,0:41:93.29:0,93,1161	0/1:25,1:25:3.08:3,0,4	0/1:25,0:23:4.27:314,0,4	1/1:15,2:14:23.10:268,23,0	1/1:17,3:16:0.20:1,0,0	1/1:12,1:12:20:190,20,0	1/1:18,1:19:4.40:115,4,0	1/1:20,1:19:8.06:91,8,0	1/1:24,0:22:17.08:182,17,0	0/0:34,0:34:79.11:0,79,943	0/0:23,0:23:66.12:0,66,777	0/0:15,0:14:42.13:0,42,524
chr10	18971254	.	G	GTGTGTA	6510.02	PASS	AB=0.692;AC=26;AF=0.464;AN=56;BaseQRankSum=-4.845;DP=674;FS=5.119;HRun=0;HaplotypeScore=135.5443;InbreedingCoeff=0.4864;MQ=53.93;MQ0=25;MQRankSum=-5.399;QD=15.35;ReadPosRankSum=-3.309;VQSLOD=3.3118;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:15,0:35:37.73:38,0,293	0/1:1,0:6:22.40:120,0,22	0/0:12,0:5:12.04:0,12,155	0/0:12,0:5:12.04:0,12,150	0/0:24,0:24:69.17:0,69,1237	1/1:2,21:23:18.06:637,18,0	1/1:1,25:27:3.90:109,4,0	1/1:44,0:42:83.29:1338,83,0	0/1:16,0:35:99:266,0,504	0/0:33,0:33:93.14:0,93,1755	0/0:19,0:20:57.17:0,57,1106	1/1:1,19:25:21.07:666,21,0	0/0:16,0:16:48.12:0,48,826	0/0:22,0:22:66.22:0,66,1187	1/1:2,23:26:9.03:319,9,0	0/1:26,0:24:99:175,0,183	0/0:39,0:39:99:0,99,1699	0/1:28,0:27:2.09:2,0,24	1/1:5,16:20:10.73:729,11,0	1/1:3,14:15:18.95:640,19,0	0/1:6,14:19:0:0,0,0	1/1:1,12:15:15.05:531,15,0	0/1:4,15:21:0.31:306,0,0	0/1:5,15:20:17.05:101,0,17	1/1:2,22:22:15.05:531,15,0	0/0:31,0:31:90.24:0,90,1613	0/0:24,0:24:72.20:0,72,1302	0/0:16,0:15:45.13:0,45,875
chr10	18971256	.	GTATGTA	G	1977.17	PASS	AB=0.963;AC=6;AF=0.107;AN=56;BaseQRankSum=-3.876;DP=652;FS=35.182;HRun=0;HaplotypeScore=145.1184;InbreedingCoeff=0.5298;MQ=52.70;MQ0=25;MQRankSum=0.761;QD=17.50;ReadPosRankSum=-4.469;VQSLOD=0.5572;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:45.14:0,45,756	0/0:6,0:6:15.05:0,15,400	0/0:12,0:5:12.04:0,12,164	0/0:12,0:4:12.04:0,12,150	0/0:24,0:24:72.24:0,72,2002	0/0:22,0:21:26.89:0,27,468	0/0:24,0:24:9.14:0,9,152	0/1:43,0:42:99:855,0,607	0/0:35,0:35:74.74:0,75,1728	0/0:32,0:32:96.15:0,96,2731	0/0:19,0:19:18.37:0,18,1505	0/0:25,0:25:29.90:0,30,539	0/0:16,0:16:48.15:0,48,1373	0/0:22,0:22:66.22:0,66,1663	0/0:24,0:24:26.68:0,27,305	1/1:9,11:23:50.77:898,51,0	0/0:38,0:38:99:0,108,2601	1/1:5,21:25:7.69:88,8,0	0/1:17,0:16:99:266,0,347	0/0:15,0:13:24.01:0,24,506	0/0:23,0:19:6.65:0,7,89	0/0:17,0:16:27.77:0,28,448	0/0:19,0:19:18.54:0,19,245	0/0:19,0:19:17.99:0,18,321	0/0:21,0:21:17.99:0,18,364	0/0:29,0:31:86.17:0,86,2509	0/0:24,0:24:72.24:0,72,2033	0/0:16,0:15:45.15:0,45,1341
chr10	18971701	.	T	TA	14635.44	PASS	AB=0.600;AC=51;AF=0.911;AN=56;BaseQRankSum=-8.210;DP=618;FS=11.761;HRun=9;HaplotypeScore=58.6666;InbreedingCoeff=0.7844;MQ=85.30;MQ0=0;MQRankSum=-7.641;QD=25.32;ReadPosRankSum=3.359;VQSLOD=4.9578;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,39:44:85.21:1155,85,0	0/1:2,4:6:8.01:148,0,8	0/0:20,0:20:41.83:0,42,345	0/0:20,0:20:24.02:0,24,275	1/1:5,24:29:69.19:761,69,0	1/1:0,20:20:54.15:597,54,0	1/1:5,17:22:36.10:398,36,0	1/1:8,19:28:56.92:575,57,0	1/1:7,21:28:55.03:599,55,0	1/1:6,18:25:56.95:599,57,0	1/1:2,12:14:33.09:365,33,0	1/1:0,13:13:36.09:391,36,0	1/1:1,19:20:57.15:631,57,0	1/1:5,25:31:75.13:805,75,0	1/1:2,22:24:37.07:624,37,0	1/1:2,18:20:51.14:564,51,0	1/1:7,24:31:43.13:704,43,0	1/1:5,11:16:33.09:365,33,0	1/1:4,21:25:43.11:691,43,0	1/1:1,28:30:54.93:779,55,0	1/1:3,18:21:51.14:564,51,0	1/1:7,14:21:13.05:372,13,0	1/1:2,17:19:45.59:499,46,0	1/1:2,24:26:72.19:797,72,0	1/1:1,13:14:30.08:332,30,0	1/1:0,23:23:66.13:708,66,0	1/1:3,20:24:44.92:478,45,0	1/1:0,4:4:12.03:133,12,0
chr10	18972242	.	GA	G	17749.87	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=0.294;DP=532;FS=10.983;HRun=1;HaplotypeScore=58.8385;InbreedingCoeff=0.9874;MQ=87.75;MQ0=0;MQRankSum=-5.359;QD=38.34;ReadPosRankSum=3.933;VQSLOD=4.7812;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,31:31:84.28:1174,84,0	1/1:0,6:6:18.06:251,18,0	0/0:18,0:18:51.16:0,51,744	0/0:19,0:19:50.95:0,51,718	1/1:0,12:12:30.10:419,30,0	1/1:0,11:11:24.08:336,24,0	1/1:0,34:34:93.31:1300,93,0	1/1:0,22:22:63.17:844,63,0	1/1:0,11:11:30.10:419,30,0	1/1:0,6:6:15:209,15,0	1/1:0,17:17:45.15:623,45,0	1/1:0,19:19:54.18:751,54,0	1/1:0,14:14:36.12:503,36,0	1/1:0,19:19:48.16:671,48,0	1/1:0,19:19:51.17:713,51,0	0/0:11,0:11:33.11:0,33,527	1/1:0,28:28:75.25:1049,75,0	0/0:21,0:21:63.21:0,63,1001	1/1:0,18:18:54.18:746,54,0	1/1:0,12:12:36.12:503,36,0	1/1:0,42:42:99:1636,117,0	1/1:0,9:9:24.08:336,24,0	1/1:0,15:15:39.11:545,39,0	1/1:0,56:56:99:2265,163,0	1/1:1,13:14:39.13:544,39,0	1/1:0,14:14:39.11:526,39,0	1/1:0,29:29:84.28:1175,84,0	1/1:0,5:5:15.05:210,15,0
chr10	18972456	.	T	TC	741.91	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-7.009;DP=483;FS=1.829;HRun=1;HaplotypeScore=58.4456;InbreedingCoeff=0.9875;MQ=75.35;MQ0=0;MQRankSum=-1.418;QD=25.58;ReadPosRankSum=0.794;VQSLOD=3.5768;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,111,1354	0/0:7,0:7:20.99:0,21,225	0/0:10,0:10:21.09:0,21,215	0/0:15,0:15:21.54:0,22,384	0/0:18,0:18:54.10:0,54,650	0/0:12,0:12:36.12:0,36,466	0/0:23,0:23:66.15:0,66,782	0/0:24,0:24:72.21:0,72,896	0/0:10,0:10:30.07:0,30,360	0/0:14,0:14:36.11:0,36,446	0/0:12,0:12:36.08:0,36,427	0/0:20,0:20:48.16:0,48,621	0/0:12,0:12:36.11:0,36,454	0/0:24,0:24:72.19:0,72,900	0/0:14,0:14:42.13:0,42,527	1/1:2,8:10:24.08:345,24,0	0/0:31,0:31:90.21:0,90,1089	1/1:1,18:19:36.12:518,36,0	0/0:18,0:18:53.18:0,53,638	0/0:13,0:13:36.02:0,36,411	0/0:15,0:15:41.96:0,42,481	0/0:8,0:8:18.06:0,18,233	0/0:12,0:12:36.02:0,36,419	0/0:23,0:23:57.17:0,57,718	0/0:19,0:19:54.01:0,54,656	0/0:27,0:27:81.24:0,81,1013	0/0:26,0:26:78.25:0,78,1008	0/0:9,0:9:27.09:0,27,349
chr10	18972543	.	CGTCCGCGTTCG	C	13978.81	PASS	AC=24;AF=0.444;AN=54;BaseQRankSum=15.551;DP=538;FS=11.158;HRun=0;HaplotypeScore=184.0899;InbreedingCoeff=0.9950;MQ=91.24;MQ0=0;MQRankSum=-14.562;QD=73.57;ReadPosRankSum=0.066;VQSLOD=3.9861;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,102,5780	0/0:8,0:8:24.08:0,24,1309	0/0:23,0:23:69.24:0,69,3287	0/0:27,0:27:78.27:0,78,3760	0/0:9,0:9:24.06:0,24,994	1/1:0,14:14:39.13:1452,39,0	1/1:0,26:26:57.20:2049,57,0	1/1:0,13:13:39.11:1189,39,0	0/0:22,0:22:66.23:0,66,3806	0/0:18,0:18:54.19:0,54,2972	0/0:12,0:12:36.12:0,36,1909	1/1:0,20:20:45.15:1676,45,0	0/0:19,0:19:57.20:0,57,2947	0/0:23,0:23:66.23:0,66,3144	1/1:0,24:24:57.20:2122,57,0	0/0:15,0:15:42.14:0,42,2448	0/0:42,0:42:99:0,126,7001	0/0:34,0:34:84.29:0,84,4939	1/1:0,12:12:36.09:1018,36,0	1/1:0,9:10:21.07:726,21,0	1/1:0,13:13:21.54:591,22,0	1/1:1,16:17:31.05:1066,31,0	1/1:0,10:10:15.05:503,15,0	1/1:0,19:19:24.08:842,24,0	1/1:0,12:12:21.07:745,21,0	0/0:30,0:30:90.31:0,90,5032	0/0:29,0:29:84.29:0,84,4766	./.
chr10	18973052	.	TG	T	9990.55	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=10.761;DP=508;FS=1.158;HRun=1;HaplotypeScore=233.4320;InbreedingCoeff=0.9940;MQ=84.59;MQ0=0;MQRankSum=-11.573;QD=21.91;ReadPosRankSum=7.829;VQSLOD=4.2950;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,41:45:99:896,117,0	1/1:0,7:7:20.91:161,21,0	0/0:28,0:28:81.27:0,81,1269	0/0:24,0:24:69.15:0,69,1012	1/1:4,17:21:50.33:396,50,0	1/1:0,23:23:68.78:540,69,0	1/1:2,13:15:44.82:347,45,0	1/1:1,15:16:47.95:413,48,0	1/1:2,24:26:65.28:501,65,0	1/1:2,13:15:44.40:374,44,0	1/1:1,7:8:23.80:176,24,0	1/1:0,16:20:46.79:339,47,0	1/1:1,13:14:41.82:321,42,0	1/1:0,20:21:59.76:463,60,0	1/1:2,26:28:83.71:655,84,0	1/1:1,16:17:50.90:426,51,0	1/1:1,16:17:44.82:347,45,0	1/1:0,12:12:35.96:301,36,0	1/1:1,11:12:35.96:309,36,0	1/1:2,11:13:38.87:310,39,0	1/1:0,12:12:32.88:255,33,0	1/1:2,12:14:41.80:318,42,0	1/1:1,11:13:32.79:244,33,0	1/1:0,20:20:41.77:311,42,0	1/1:0,13:13:38.83:296,39,0	1/1:2,19:21:59.90:493,60,0	1/1:0,26:26:77.81:627,78,0	1/1:0,7:7:20.97:174,21,0
chr10	18973054	.	TGAA	T	15363.60	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=10.659;DP=498;FS=0.000;HRun=0;HaplotypeScore=228.3396;InbreedingCoeff=0.9932;MQ=84.24;MQ0=0;MQRankSum=-11.466;QD=34.37;ReadPosRankSum=7.783;VQSLOD=4.6264;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,41:45:99:1398,117,0	1/1:0,7:7:21.07:258,21,0	0/0:27,0:27:78.21:0,78,1714	0/0:24,0:24:66.70:0,67,1590	1/1:1,17:18:42.07:481,42,0	1/1:0,23:23:69.22:858,69,0	1/1:1,13:14:39.12:482,39,0	1/1:1,15:16:48.15:608,48,0	1/1:1,24:25:72.11:838,72,0	1/1:2,13:15:45.07:524,45,0	1/1:0,7:7:21.06:246,21,0	1/1:4,16:20:51.03:574,51,0	1/1:0,14:14:42.13:514,42,0	1/1:1,20:21:63.15:761,63,0	1/1:1,26:27:81.25:994,81,0	1/1:1,16:17:51.15:630,51,0	1/1:1,16:17:45.14:554,45,0	1/1:0,12:12:36.12:467,36,0	1/1:1,11:12:36.09:447,36,0	1/1:2,11:13:38.69:438,39,0	1/1:0,12:12:33.10:407,33,0	1/1:1,12:13:39.11:463,39,0	1/1:1,12:13:36.04:414,36,0	1/1:0,20:20:45.09:524,45,0	1/1:0,13:13:39.12:476,39,0	1/1:1,19:20:60.19:752,60,0	1/1:0,26:26:78.25:984,78,0	1/1:0,7:7:21.07:272,21,0
chr10	18973389	.	TGATTTTGA	T	23846.38	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=3.804;DP=459;FS=12.292;HRun=0;HaplotypeScore=162.2596;InbreedingCoeff=0.8582;MQ=82.73;MQ0=0;MQRankSum=-9.742;QD=57.60;ReadPosRankSum=6.399;VQSLOD=3.7670;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,14:18:39.13:1057,39,0	1/1:1,4:5:12.04:323,12,0	0/0:21,0:21:50.98:0,51,1696	0/0:24,0:24:55.32:0,55,2026	1/1:2,10:12:24.08:651,24,0	1/1:3,22:25:57.13:1424,57,0	1/1:2,14:16:39.13:1013,39,0	1/1:12,19:31:54.17:1408,54,0	1/1:4,19:23:54.19:1459,54,0	1/1:10,14:24:45.15:1216,45,0	1/1:0,4:4:12:264,12,0	1/1:2,16:18:48.16:1301,48,0	1/1:3,16:20:48.16:1295,48,0	1/1:2,13:15:42.14:1138,42,0	1/1:4,16:20:48.16:1292,48,0	1/1:2,12:14:36.12:976,36,0	1/1:1,9:10:24.08:608,24,0	1/1:1,6:6:15.05:364,15,0	1/1:10,14:24:39.07:900,39,0	1/1:0,19:19:57.15:1440,57,0	1/1:3,7:10:15.05:361,15,0	1/1:3,18:21:54.14:1390,54,0	1/1:2,7:9:21.03:508,21,0	1/1:3,8:11:5.97:120,6,0	1/1:1,10:11:30.10:813,30,0	1/1:4,14:18:45.15:1185,45,0	1/1:6,21:27:45.15:1220,45,0	1/1:0,2:2:6.02:120,6,0
chr10	18973423	.	TTGTGTG	T	919.02	PASS	AB=0.889;AC=15;AF=0.288;AN=52;BaseQRankSum=-3.025;DP=521;FS=2.305;HRun=0;HaplotypeScore=254.1136;InbreedingCoeff=0.6949;MQ=47.81;MQ0=8;MQRankSum=0.971;QD=5.89;ReadPosRankSum=-0.936;VQSLOD=2.3828;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:26:9.03:0,9,206	0/0:7,0:7:12.04:0,12,311	0/0:18,0:16:6.02:0,6,100	0/0:12,0:11:5.30:0,5,25	0/0:18,0:18:1.41:0,1,2	1/1:11,9:21:15.05:297,15,0	0/0:12,5:18:2.96:0,3,20	1/1:20,1:20:12:201,12,0	0/0:23,0:23:24.46:0,24,440	0/0:28,0:28:46.40:0,46,1078	0/0:9,0:9:3.48:0,3,82	1/1:12,13:25:12.04:225,12,0	0/0:22,0:22:27.43:0,27,488	0/0:24,0:24:11.86:0,12,201	0/0:15,10:26:0.47:0,0,1	0/0:24,0:21:15.05:0,15,303	0/0:15,0:15:18.04:0,18,396	0/0:12,0:11:18.06:0,18,413	1/1:18,2:20:12.04:226,12,0	1/1:13,11:24:6.01:64,6,0	./.	1/1:17,1:20:2.74:12,3,0	1/1:4,5:9:2.82:55,3,0	0/1:14,2:15:0:1,0,0	./.	0/0:28,0:24:57.15:0,57,1248	0/0:20,0:20:21.07:0,21,450	0/0:7,0:5:12:0,12,252
chr10	18973450	.	TGTGTGTGAGAGAGA	T	2488.54	PASS	AB=0.952;AC=19;AF=0.365;AN=52;BaseQRankSum=-6.302;DP=527;FS=0.626;HRun=0;HaplotypeScore=245.3173;InbreedingCoeff=0.7641;MQ=34.13;MQ0=25;MQRankSum=1.996;QD=11.31;ReadPosRankSum=-3.269;VQSLOD=1.3855;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:26:12.04:0,12,393	0/0:6,0:6:15.05:0,15,455	0/0:3,0:3:6.02:0,6,100	0/0:4,0:3:5.30:0,5,25	0/0:20,0:20:7.43:0,7,192	1/1:23,1:23:21.07:482,21,0	0/1:19,0:17:14.60:28,0,15	1/1:26,0:23:47.95:649,48,0	0/0:24,0:22:27.29:0,27,664	0/0:25,0:25:70.48:0,70,2028	0/0:10,0:10:6.96:0,7,232	1/1:22,1:22:15.05:376,15,0	0/0:19,0:19:42.56:0,43,866	0/0:23,0:23:20.31:0,20,507	1/1:22,2:23:5.97:143,6,0	0/0:27,0:21:27.55:0,28,682	0/0:15,0:14:29.31:0,29,745	0/0:16,0:10:24.08:0,24,660	1/1:16,0:16:23.87:510,24,0	1/1:19,2:21:6.01:64,6,0	./.	1/1:25,0:24:8.61:124,9,0	1/1:16,0:16:11.15:296,11,0	1/1:24,1:22:1.40:3,1,0	./.	0/0:31,0:27:81.23:0,81,2333	0/0:17,0:16:30.10:0,30,864	0/0:9,0:7:15.01:0,15,404
chr10	18973456	.	TGAGAGAGA	T	1936.98	PASS	AC=20;AF=0.417;AN=48;BaseQRankSum=-5.684;DP=511;FS=4.533;HRun=0;HaplotypeScore=204.6014;InbreedingCoeff=0.8047;MQ=33.23;MQ0=26;MQRankSum=2.215;QD=9.18;ReadPosRankSum=-2.794;VQSLOD=2.2534;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:26:5.89:0,6,150	0/0:8,0:8:15.04:0,15,228	./.	./.	0/0:20,0:20:6.02:0,6,191	1/1:21,4:24:15.05:339,15,0	1/1:15,3:15:2.86:34,3,0	1/1:11,12:20:36.08:449,36,0	0/0:22,0:20:11.90:0,12,223	0/0:26,0:25:50.73:0,51,933	0/0:10,0:10:6.02:0,6,150	1/1:20,1:20:14.65:211,15,0	0/0:16,0:16:24.07:0,24,424	0/0:20,0:20:12.04:0,12,306	1/1:18,3:22:6.02:143,6,0	0/0:25,0:19:17.96:0,18,427	0/0:14,0:13:23.15:0,23,312	0/0:17,0:11:14.88:0,15,289	1/1:13,2:15:20.38:281,20,0	1/1:19,1:20:3.01:77,3,0	./.	1/1:25,0:24:11.99:265,12,0	1/1:16,1:17:14.26:314,14,0	1/1:22,2:21:0.94:2,1,0	./.	0/0:32,0:28:60.19:0,60,1166	0/0:17,0:16:23.91:0,24,471	0/0:9,0:7:11.99:0,12,155
chr10	18973485	.	GAC	G	1299.45	PASS	AB=1.000;AC=25;AF=0.500;AN=50;BaseQRankSum=3.353;DP=515;FS=0.000;HRun=0;HaplotypeScore=165.4591;InbreedingCoeff=0.8479;MQ=38.03;MQ0=30;MQRankSum=-0.290;QD=5.16;ReadPosRankSum=0.488;VQSLOD=3.1112;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:31,1:32:8.02:55,8,0	1/1:9,0:8:3.94:49,4,0	./.	./.	1/1:18,0:19:10.97:64,11,0	0/0:23,0:22:20.62:0,21,119	0/0:18,0:15:17.86:0,18,134	0/0:29,0:24:49.71:0,50,355	1/1:21,0:19:27.33:216,27,0	1/1:24,1:24:28.47:259,28,0	1/1:19,0:19:11.79:96,12,0	0/0:22,0:21:21.87:0,22,145	1/1:16,1:16:7.29:67,7,0	1/1:16,0:16:7.58:48,8,0	0/0:26,0:25:14.67:0,15,105	0/0:21,0:17:25.25:0,25,270	1/1:15,0:14:7.52:59,8,0	0/0:18,0:12:32.75:0,33,279	0/0:14,0:14:27.06:0,27,170	0/0:21,0:21:34.94:0,35,268	0/0:13,0:10:8.73:0,9,60	0/1:21,0:20:0.49:0,0,108	0/0:21,0:20:29.66:0,30,197	0/0:25,0:22:11.80:0,12,86	./.	1/1:29,1:27:23.78:333,24,0	1/1:22,0:21:21.50:170,21,0	1/1:6,0:6:10.28:81,10,0
chr10	18974058	.	TC	T	2117.82	PASS	AB=0.708;AC=39;AF=0.929;AN=42;BaseQRankSum=-2.758;DP=165;FS=11.565;HRun=4;HaplotypeScore=38.1696;InbreedingCoeff=0.0315;MQ=46.53;MQ0=22;MQRankSum=0.329;QD=13.66;ReadPosRankSum=1.443;VQSLOD=1.2139;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,2:4:5.04:42,5,0	./.	0/1:10,3:4:2.96:29,0,3	0/1:10,3:5:9.12:28,0,9	1/1:1,2:3:6.02:72,6,0	1/1:2,0:1:3.01:35,3,0	./.	./.	1/1:2,0:1:0.47:1,0,0	1/1:0,13:10:20.90:224,21,0	1/1:0,3:2:3.01:36,3,0	1/1:2,1:2:4.56:40,5,0	1/1:1,14:12:34.86:371,35,0	1/1:1,5:3:6.02:72,6,0	./.	1/1:0,12:11:27.08:324,27,0	1/1:3,7:8:19.61:217,20,0	1/1:0,18:18:39.12:468,39,0	./.	1/1:0,2:2:4.83:41,5,0	1/1:8,4:5:2.98:36,3,0	1/1:0,2:2:3.01:36,3,0	0/1:0,3:3:0.08:0,0,0	1/1:3,5:6:6.02:72,6,0	./.	1/1:2,0:1:2.99:23,3,0	1/1:0,4:1:3.01:36,3,0	./.
chr10	18974082	.	CCTGCTCT	C	2359.52	PASS	AB=0.967;AC=36;AF=0.692;AN=52;BaseQRankSum=-2.407;DP=315;FS=0.000;HRun=0;HaplotypeScore=99.7705;InbreedingCoeff=0.0338;MQ=53.44;MQ0=19;MQRankSum=2.248;QD=9.71;ReadPosRankSum=-2.650;VQSLOD=1.0631;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:10,0:8:2.61:127,0,3	1/1:5,0:5:11.82:80,12,0	0/0:35,0:13:31.71:0,32,340	0/0:32,0:15:42.05:0,42,573	0/1:6,6:12:16.08:29,0,16	1/1:11,0:8:17.91:141,18,0	0/1:7,0:6:0.06:81,0,0	./.	1/1:7,0:3:7.19:47,7,0	0/1:18,0:14:15.13:176,0,15	0/0:1,0:1:3:0,3,27	0/1:5,0:3:12.65:19,0,13	0/1:17,0:16:21.03:118,0,21	1/1:7,0:3:2.90:16,3,0	1/1:4,0:2:5.90:38,6,0	1/1:12,0:11:23.89:213,24,0	1/1:13,0:12:3.56:172,4,0	1/1:21,0:21:44.42:413,44,0	1/1:3,0:1:2.97:20,3,0	1/1:3,0:3:4.62:45,5,0	1/1:25,0:22:26.81:316,27,0	0/1:10,0:8:2.32:45,0,2	0/1:9,0:9:17.71:18,0,19	0/1:20,0:19:31.54:126,0,32	0/1:6,0:6:21.28:21,0,31	1/1:6,0:5:14.87:120,15,0	1/1:12,0:8:8.10:130,8,0	./.
chr10	18974239	.	GGTCTCTGATCCCCA	G	453.84	PASS	AB=0.900;AC=13;AF=0.342;AN=38;BaseQRankSum=1.584;DP=186;FS=2.652;HRun=0;HaplotypeScore=45.0316;InbreedingCoeff=0.0056;MQ=20.57;MQ0=53;MQRankSum=0.420;QD=6.48;ReadPosRankSum=1.692;VQSLOD=1.3991;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:2:0:0,0,0	0/0:3,0:2:5.98:0,6,79	./.	0/0:26,0:2:3.01:0,3,32	./.	0/0:10,0:5:6.02:0,6,143	0/1:11,0:6:56.71:57,0,273	0/0:6,0:5:15.02:0,15,275	./.	./.	./.	1/1:7,0:3:3.01:39,3,0	0/1:2,1:2:57.65:80,0,58	0/1:10,0:7:0:0,0,0	0/1:3,0:2:11.91:33,0,12	0/1:5,7:10:16.41:16,0,113	0/1:5,0:5:44.96:174,0,45	0/0:3,0:2:5.05:0,5,105	1/1:6,0:4:3.01:91,3,0	./.	0/1:10,1:7:10.99:34,0,11	./.	0/0:12,0:6:9.50:0,10,177	1/1:2,0:2:5.05:48,5,0	0/0:4,0:3:3:0,3,29	0/0:3,0:3:8.52:0,9,104	./.	./.
chr10	18974496	.	TCTCTGATCCCTGATCCCTGATCCCTGCTCCCTGATCCCTGG	T	2496.25	PASS	AB=0.982;AC=25;AF=0.446;AN=56;BaseQRankSum=-3.831;DP=444;FS=18.301;HRun=0;HaplotypeScore=299.8755;InbreedingCoeff=-0.4694;MQ=42.30;MQ0=31;MQRankSum=0.528;QD=7.87;ReadPosRankSum=8.889;VQSLOD=0.6959;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:25:99:305,0,773	0/1:11,0:7:33.96:34,0,293	0/0:46,0:12:31.87:0,32,659	0/0:43,0:18:35.73:0,36,947	0/1:23,0:20:51.71:52,0,531	0/1:8,0:8:47.10:47,0,300	0/1:17,0:14:99:145,0,175	1/1:13,0:9:3:27,3,0	0/1:9,0:7:69.80:70,0,601	1/1:23,0:16:14.98:216,15,0	0/0:13,0:10:6.02:0,6,300	0/1:11,0:11:22.84:23,0,438	0/1:9,0:7:62.85:63,0,310	0/1:17,0:14:99:108,0,380	0/1:10,0:8:90.93:91,0,438	0/1:11,0:10:87.18:87,0,418	0/1:15,0:15:99:261,0,301	0/1:6,0:6:56.73:57,0,157	0/0:6,0:4:3.01:0,3,155	0/1:11,0:10:10.71:11,0,342	1/1:11,0:11:11.44:184,11,0	0/1:13,0:9:39.14:39,0,320	0/0:17,0:13:6.02:0,6,104	0/1:18,0:18:99:208,0,367	0/1:16,0:12:99:135,0,163	0/1:9,10:15:99:403,0,436	0/1:20,0:16:92.35:92,0,692	0/0:2,0:1:3.01:0,3,119
chr10	18974517	.	TCCCTGCTCCCTGATCCCTGG	T	3715.22	PASS	AB=0.984;AC=24;AF=0.429;AN=56;BaseQRankSum=-4.790;DP=422;FS=7.557;HRun=0;HaplotypeScore=193.7291;InbreedingCoeff=-0.5618;MQ=44.40;MQ0=28;MQRankSum=1.066;QD=12.18;ReadPosRankSum=-4.686;VQSLOD=0.1500;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:24:99:347,0,480	0/1:10,0:6:33.96:34,0,224	0/0:47,0:14:40.38:0,40,797	0/0:37,0:20:45.48:0,45,1148	0/1:12,11:22:99:144,0,375	0/1:11,0:11:99:176,0,176	0/1:21,0:18:99:187,0,502	1/1:4,0:2:3:27,3,0	0/1:9,0:8:99:165,0,375	0/1:13,0:8:99:198,0,122	0/0:4,7:10:6.02:0,6,198	0/1:10,0:10:22.37:22,0,292	0/1:11,0:9:99:177,0,161	0/1:15,0:14:99:165,0,175	0/1:10,0:9:88.86:89,0,350	0/1:11,0:10:99:203,0,256	0/1:17,0:17:99:413,0,344	0/1:9,0:9:99:113,0,141	0/0:5,0:3:2.84:0,3,109	0/1:13,0:13:70.46:70,0,215	1/1:12,0:12:7.91:169,8,0	0/1:13,0:8:93.30:93,0,214	0/0:4,9:13:6.02:0,6,74	0/1:19,0:18:99:203,0,255	0/1:11,0:9:94.10:134,0,94	0/1:16,0:14:99:431,0,315	0/1:20,0:18:99:153,0,492	0/0:3,0:2:3.01:0,3,101
chr10	18974536	.	G	GA	1598.15	PASS	AB=0.737;AC=22;AF=0.393;AN=56;BaseQRankSum=-3.297;DP=321;FS=4.357;HRun=0;HaplotypeScore=91.0322;InbreedingCoeff=-0.5592;MQ=49.25;MQ0=15;MQRankSum=0.061;QD=7.17;ReadPosRankSum=-4.754;VQSLOD=2.3301;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:11,9:18:99:99,0,341	0/0:4,1:5:9.03:0,9,126	0/0:26,0:11:26.66:0,27,307	0/0:33,0:18:45.40:0,45,527	0/1:20,0:20:68.16:68,0,189	0/1:2,3:5:71.89:74,0,72	0/1:11,5:14:60.49:60,0,305	0/0:5,0:3:9.03:0,9,126	0/1:4,5:8:99:114,0,147	0/1:2,2:4:32.95:76,0,33	0/0:9,0:9:6.02:0,6,84	0/1:5,2:7:30.37:30,0,153	0/1:4,5:7:99:117,0,108	0/1:9,2:11:71.62:72,0,143	0/1:7,2:8:58.30:58,0,150	0/1:4,4:8:99:159,0,105	0/1:12,5:16:99:189,0,215	0/1:4,4:8:71.71:72,0,150	0/0:5,1:3:6.02:0,6,84	0/1:4,4:8:32.78:33,0,114	1/1:4,6:10:5.96:69,6,0	0/1:5,3:6:74.74:75,0,89	0/0:14,0:14:5.98:0,6,79	0/1:11,3:13:30.40:30,0,153	0/1:2,3:5:36.47:36,0,75	0/1:14,0:12:99:104,0,147	0/1:9,7:15:99:107,0,224	0/1:2,3:5:29.86:114,0,30
chr10	18974676	.	ATCCCTG	A	1775.95	PASS	AB=0.883;AC=25;AF=0.463;AN=54;BaseQRankSum=1.442;DP=422;FS=9.763;HRun=0;HaplotypeScore=153.5749;InbreedingCoeff=-0.5688;MQ=40.71;MQ0=21;MQRankSum=3.393;QD=5.41;ReadPosRankSum=10.036;VQSLOD=0.3444;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:24,2:25:99:109,0,155	1/1:1,1:2:6.01:63,6,0	0/0:39,0:7:15.45:0,15,258	0/0:34,0:15:33.82:0,34,645	1/1:9,0:8:9.02:99,9,0	0/0:9,0:9:14.92:0,15,111	0/1:14,5:19:99:235,0,110	0/1:27,0:25:9.23:9,0,375	0/0:10,0:9:20.77:0,21,148	0/1:23,0:22:99:250,0,194	0/1:3,1:4:32.86:40,0,33	0/1:19,2:20:45.10:45,0,252	0/1:11,1:12:73.24:73,0,101	0/1:22,4:25:99:182,0,201	0/1:11,4:13:66.45:66,0,130	0/1:6,3:8:50.62:101,0,51	0/1:10,1:11:66.44:66,0,111	0/1:4,2:6:49.77:55,0,50	0/1:15,1:15:22.23:22,0,152	0/1:6,2:8:11.30:12,0,11	0/1:22,0:22:57.69:95,0,58	0/1:18,2:18:47.07:56,0,47	0/1:7,0:7:9.08:29,0,9	0/1:7,1:8:29.13:56,0,29	0/1:7,2:7:25.43:25,0,30	0/1:11,2:13:99:162,0,174	0/1:13,2:15:82.24:82,0,161	./.
chr10	18974692	.	TCTGATCC	T	8968.27	PASS	AC=48;AF=0.889;AN=54;BaseQRankSum=3.378;DP=375;FS=1.141;HRun=0;HaplotypeScore=123.5016;InbreedingCoeff=0.6263;MQ=44.75;MQ0=3;MQRankSum=-2.886;QD=28.11;ReadPosRankSum=4.463;VQSLOD=4.5475;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,16:21:21.07:477,21,0	1/1:2,0:2:6.01:64,6,0	0/0:29,0:11:21:0,21,515	0/0:22,0:16:32.28:0,32,643	1/1:5,4:9:15.02:261,15,0	1/1:1,8:9:21.07:492,21,0	1/1:13,4:17:9.03:183,9,0	1/1:16,10:19:11.99:118,12,0	1/1:1,10:11:15.05:352,15,0	1/1:5,21:25:54.12:1085,54,0	1/1:1,2:3:3.01:71,3,0	1/1:5,10:15:27.09:634,27,0	1/1:6,6:12:18.06:357,18,0	1/1:8,16:24:45.05:960,45,0	1/1:5,11:14:27.09:578,27,0	1/1:3,5:8:8.96:212,9,0	1/1:3,6:9:3.01:71,3,0	1/1:2,4:6:12.01:232,12,0	1/1:5,4:9:9.03:184,9,0	1/1:3,5:8:15.05:322,15,0	1/1:6,18:24:3.01:56,3,0	1/1:5,14:19:32.82:750,33,0	1/1:0,4:4:8.87:197,9,0	0/0:2,2:5:0.47:0,0,1	1/1:5,8:11:15.05:341,15,0	1/1:4,6:10:21.07:440,21,0	1/1:5,12:17:24.08:532,24,0	./.
chr10	18974965	.	GA	G	4749.80	PASS	AB=0.869;AC=30;AF=0.536;AN=56;BaseQRankSum=1.169;DP=660;FS=2.001;HRun=13;HaplotypeScore=133.2216;InbreedingCoeff=0.7168;MQ=66.71;MQ0=2;MQRankSum=0.086;QD=10.37;ReadPosRankSum=1.103;VQSLOD=3.5843;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,1:46:21.06:155,21,0	0/0:11,0:13:29.88:0,30,276	0/1:33,1:24:14.99:15,0,126	0/1:15,0:11:1.43:1,0,73	0/0:25,3:29:19.03:0,19,476	1/1:6,11:17:18.32:240,18,0	1/1:9,19:30:71.65:492,72,0	1/1:8,23:32:52.82:462,53,0	1/1:7,2:33:32.17:144,32,0	0/0:23,1:29:39.28:0,39,487	0/0:22,1:25:7.11:0,7,364	0/1:12,16:31:20.62:321,0,21	0/0:15,0:15:36.03:0,36,337	0/0:14,0:14:11.22:0,11,255	1/1:6,28:34:67.34:588,67,0	0/0:14,0:25:44.37:0,44,234	0/0:15,0:14:29.99:0,30,277	0/0:15,0:18:30.80:0,31,157	1/1:10,10:22:6.71:261,7,0	1/1:9,17:26:38:373,38,0	1/1:7,16:23:50.63:367,51,0	1/1:8,18:27:30.29:365,30,0	1/1:5,13:19:12.71:215,13,0	1/1:2,17:21:48.82:340,49,0	1/1:6,19:24:56.58:409,57,0	0/1:19,2:23:1.04:1,0,285	0/0:14,1:17:16.95:0,17,304	0/0:2,0:2:3:0,3,29
chr10	18975025	.	T	TC	2080.61	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-5.925;DP=742;FS=0.000;HRun=1;HaplotypeScore=96.3009;InbreedingCoeff=0.9842;MQ=90.69;MQ0=0;MQRankSum=-1.935;QD=37.15;ReadPosRankSum=0.082;VQSLOD=3.6527;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,132,1710	0/0:12,0:12:36.12:0,36,467	0/0:33,0:33:96.29:0,96,1203	0/0:29,0:29:76.49:0,76,968	0/0:31,0:31:77.72:0,78,1010	0/0:14,0:14:39.11:0,39,491	0/0:29,0:29:84.27:0,84,1090	0/0:32,0:32:87.28:0,87,1124	0/0:35,0:35:93.30:0,93,1206	0/0:40,0:40:99:0,117,1519	0/0:16,0:16:45.15:0,45,582	0/0:31,0:31:90.26:0,90,1136	0/0:13,0:13:36.12:0,36,466	0/0:19,0:19:54.18:0,54,701	0/0:43,0:43:99:0,126,1636	1/1:3,26:29:75.24:1104,75,0	0/0:22,0:21:66.21:0,66,857	1/1:0,26:27:75.23:1099,75,0	0/0:17,0:17:51.17:0,51,661	0/0:20,0:20:54.18:0,54,701	0/0:44,0:44:99:0,129,1656	0/0:28,0:28:75.24:0,75,972	0/0:21,0:21:54.18:0,54,701	0/0:35,0:35:93.30:0,93,1207	0/0:18,0:18:54.18:0,54,701	0/0:29,0:29:87.27:0,87,1104	0/0:20,0:20:60.16:0,60,749	0/0:4,0:4:12.04:0,12,154
chr10	18976655	.	A	ATTG	9520.60	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-14.508;DP=644;FS=0.000;HRun=0;HaplotypeScore=142.2760;InbreedingCoeff=0.9562;MQ=64.81;MQ0=0;MQRankSum=10.867;QD=35.00;ReadPosRankSum=2.897;VQSLOD=5.5198;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:60.20:0,60,812	1/1:3,4:7:9.03:178,9,0	0/0:28,0:24:24.07:0,24,299	0/0:29,0:26:30.10:0,30,483	1/1:9,13:23:39.13:744,39,0	0/0:9,0:26:41.28:0,41,283	0/0:4,0:17:20.82:0,21,146	0/0:11,0:27:26.78:0,27,189	0/0:15,0:15:33.11:0,33,453	1/1:11,16:27:51.17:953,51,0	1/1:5,12:17:33.11:651,33,0	0/0:7,0:25:38.69:0,39,273	1/1:8,12:20:36.12:689,36,0	1/1:3,19:22:57.20:1117,57,0	0/0:2,0:16:29.76:0,30,210	1/1:10,15:26:3.97:788,4,0	1/1:4,27:31:39.01:1272,39,0	1/1:9,16:26:38.96:724,39,0	0/0:14,0:19:11.90:0,12,84	0/0:5,0:25:35.71:0,36,252	0/0:5,0:17:8.93:0,9,63	0/0:6,0:23:38.69:0,39,273	0/0:6,0:19:23.81:0,24,168	0/0:9,0:28:23.81:0,24,168	0/0:3,0:22:41.66:0,42,294	1/1:9,17:27:57.15:1044,57,0	1/1:10,16:26:33.11:651,33,0	1/1:3,17:20:36.12:710,36,0
chr10	18977639	.	CT	C	303.04	PASS	AB=0.888;AC=8;AF=0.143;AN=56;BaseQRankSum=-1.644;DP=530;FS=3.881;HRun=14;HaplotypeScore=72.5397;InbreedingCoeff=0.2768;MQ=66.25;MQ0=13;MQRankSum=0.903;QD=2.44;ReadPosRankSum=2.429;VQSLOD=-0.5000;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,1:21:18.19:0,18,293	0/0:3,0:6:11.32:0,11,56	0/0:29,0:16:17.44:0,17,123	0/0:22,0:8:5.71:0,6,40	0/0:19,0:23:26.64:0,27,140	0/0:4,0:18:22.87:0,23,124	0/0:7,0:11:23.07:0,23,145	0/0:26,0:26:53:0,53,454	0/0:16,0:16:15.90:0,16,226	0/0:15,0:30:20.13:0,20,97	0/0:14,0:22:34.02:0,34,200	0/0:15,1:16:18.94:0,19,314	0/0:4,0:8:2.84:0,3,14	0/0:10,0:9:15.96:0,16,82	0/1:12,2:13:23.53:24,0,207	1/1:3,10:13:3.96:163,4,0	0/0:6,0:28:25.71:0,26,137	1/1:5,16:20:7.84:198,8,0	0/1:24,3:26:26.28:26,0,258	0/1:19,3:21:16.76:17,0,275	0/0:10,0:12:17.86:0,18,153	0/0:10,0:10:22.84:0,23,200	0/0:17,1:18:18.41:0,18,305	0/0:13,1:13:3.38:0,3,161	0/1:23,3:26:1.95:2,0,380	0/0:21,0:25:26.13:0,26,187	0/0:10,0:15:23.60:0,24,109	0/0:18,0:23:17.93:0,18,88
chr10	18978563	.	G	GGCCGGATGGGAGGCGGGGC	17964.62	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=1.942;DP=639;FS=25.458;HRun=0;HaplotypeScore=305.9618;InbreedingCoeff=0.9500;MQ=83.63;MQ0=0;MQRankSum=-12.410;QD=61.31;ReadPosRankSum=-6.653;VQSLOD=2.5424;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:84.23:0,84,3246	0/0:9,0:9:6.02:0,6,279	0/0:20,0:20:26.90:0,27,606	0/0:25,0:25:35.78:0,36,1000	0/0:18,0:18:33.11:0,33,1559	1/1:16,5:22:36.12:2368,36,0	1/1:36,0:36:42.14:2253,42,0	1/1:31,0:31:48.14:1867,48,0	0/0:19,0:19:45.15:0,45,2222	0/0:31,0:31:54.17:0,54,2240	0/0:16,0:16:36.12:0,36,1537	1/1:29,11:42:66.22:4973,66,0	0/0:14,0:14:39.12:0,39,1769	0/0:26,0:26:60.21:0,60,2938	1/1:11,3:18:18.06:1202,18,0	0/0:18,0:18:39.13:0,39,1919	0/0:30,0:30:69.24:0,69,3027	0/0:29,0:28:69.24:0,69,3145	1/1:20,0:20:30.09:928,30,0	1/1:10,2:12:9.03:503,9,0	1/1:44,0:44:28.84:766,29,0	1/1:14,0:14:6.02:304,6,0	1/1:10,0:10:9.03:298,9,0	1/1:23,0:23:21.01:794,21,0	1/1:15,3:21:27.09:1708,27,0	0/0:20,0:20:45.15:0,45,1923	0/0:25,0:25:45.15:0,45,2058	0/0:5,0:5:15.05:0,15,773
chr10	18978855	.	G	GC	11289.50	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-17.657;DP=675;FS=0.293;HRun=2;HaplotypeScore=60.9390;InbreedingCoeff=0.9999;MQ=80.90;MQ0=0;MQRankSum=-0.790;QD=38.53;ReadPosRankSum=-0.795;VQSLOD=4.9414;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,132,1620	0/0:11,0:11:33.10:0,33,409	0/0:27,0:28:74.41:0,74,847	0/0:17,0:17:48.12:0,48,564	0/0:29,0:29:87.25:0,87,1053	1/1:1,21:21:54.18:778,54,0	1/1:3,26:29:69.23:993,69,0	1/1:1,31:32:93.30:1319,93,0	0/0:30,0:30:84.25:0,84,1028	0/0:33,0:33:93.29:0,93,1150	0/0:15,0:15:41.92:0,42,496	1/1:5,22:27:69.22:977,69,0	0/0:18,0:18:54.16:0,54,656	0/0:29,0:29:81.24:0,81,990	1/1:1,25:26:72.24:1037,72,0	0/0:29,0:29:87.26:0,87,1067	0/0:16,0:16:45.14:0,45,558	0/0:21,0:21:60.19:0,60,741	1/1:4,13:17:48.15:662,48,0	1/1:0,25:25:69.23:992,69,0	1/1:0,31:31:81.27:1166,81,0	1/1:1,16:17:42.14:604,42,0	1/1:1,15:16:45.15:647,45,0	1/1:0,31:31:90.30:1295,90,0	1/1:0,20:20:57.19:820,57,0	0/0:18,0:18:54.16:0,54,659	0/0:25,0:25:75.24:0,75,930	0/0:18,0:18:54.14:0,54,652
chr10	18980421	.	AACACACACACACACACACAC	A	1200.60	PASS	AB=0.737;AC=17;AF=0.340;AN=50;BaseQRankSum=2.579;DP=466;FS=0.000;HRun=0;HaplotypeScore=218.8089;InbreedingCoeff=0.6994;MQ=66.37;MQ0=33;MQRankSum=-2.192;QD=8.70;ReadPosRankSum=0.029;VQSLOD=2.0136;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:20:15.05:0,15,437	0/0:7,0:6:12.04:0,12,634	0/0:36,0:17:12.04:0,12,403	0/0:42,0:19:10.24:0,10,224	0/0:8,0:8:9.03:0,9,669	1/1:7,5:13:3.01:159,3,0	1/1:21,5:25:3.01:141,3,0	1/1:18,0:18:6.01:112,6,0	0/0:14,0:19:8.99:0,9,183	0/0:11,0:10:18.06:0,18,980	0/0:20,0:20:33.11:0,33,2078	1/1:9,3:12:3.01:159,3,0	0/0:16,0:15:24.08:0,24,1321	0/0:9,0:9:15.05:0,15,859	./.	0/0:22,0:20:33.01:0,33,2180	0/0:21,0:18:28.91:0,29,1245	0/0:19,0:18:39.13:0,39,2592	1/1:8,4:12:12.04:526,12,0	1/1:5,10:14:3.01:159,3,0	1/1:15,0:19:3:25,3,0	0/1:9,4:14:0:0,0,0	1/1:8,0:8:6:74,6,0	0/0:12,5:15:0.89:0,1,2	./.	0/0:20,0:17:33.10:0,33,1989	0/0:16,0:15:33.07:0,33,1363	./.
chr10	18980497	.	GAGAGAGAGAGAGAGAGA	G	1589.06	PASS	AB=0.997;AC=29;AF=0.558;AN=52;BaseQRankSum=4.572;DP=561;FS=20.165;HRun=0;HaplotypeScore=186.0745;InbreedingCoeff=-0.2029;MQ=49.85;MQ0=69;MQRankSum=5.043;QD=3.66;ReadPosRankSum=-2.944;VQSLOD=1.1023;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:16,10:20:1.80:0,2,54	1/1:6,0:4:1.68:36,2,0	0/0:27,0:13:30.58:0,31,369	0/0:28,0:10:18.97:0,19,219	0/1:22,0:20:18.50:32,0,19	0/1:32,0:31:96.66:97,0,232	0/1:27,0:23:44.94:45,0,539	0/1:35,0:34:14.62:15,0,607	1/1:16,0:14:5.21:47,5,0	0/1:17,0:16:99:135,0,191	1/1:8,0:3:2.57:38,3,0	./.	1/1:20,0:17:12.51:365,13,0	0/1:10,0:9:15.30:76,0,15	0/0:14,0:14:1.86:0,2,198	1/1:15,1:12:5.96:218,6,0	0/1:23,0:17:12.51:121,0,13	0/1:20,0:14:61.51:62,0,121	0/0:19,0:18:8.68:0,9,869	1/1:19,0:19:15.80:55,16,0	1/1:23,0:17:4.49:21,4,0	0/1:22,0:22:58.08:58,0,108	1/1:17,0:17:0.66:5,1,0	0/1:35,0:27:7.59:8,0,1072	0/1:20,0:21:68.35:85,0,68	0/1:17,0:9:57.22:57,0,60	0/1:27,0:24:44.31:170,0,44	./.
chr10	18980499	.	GAGAGAGAGAGAGAGA	G	1966.41	PASS	AB=0.997;AC=35;AF=0.673;AN=52;BaseQRankSum=3.505;DP=572;FS=6.566;HRun=0;HaplotypeScore=177.7712;InbreedingCoeff=-0.1270;MQ=54.34;MQ0=71;MQRankSum=3.960;QD=4.10;ReadPosRankSum=-1.312;VQSLOD=2.2083;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:20:13.79:14,0,31	1/1:6,0:4:2.10:36,2,0	0/0:29,0:15:36.79:0,37,414	0/0:34,0:14:28.42:0,28,338	1/1:10,13:20:2.80:38,3,0	0/1:32,0:31:97.51:98,0,190	0/1:26,0:23:54.49:54,0,438	0/1:36,0:35:25.68:26,0,455	1/1:17,0:14:5.99:89,6,0	0/1:17,0:16:99:157,0,147	1/1:8,0:3:2.56:38,3,0	./.	1/1:18,2:17:12.04:435,12,0	1/1:10,0:9:2.77:99,3,0	0/0:15,0:15:1.97:0,2,174	1/1:17,0:13:5.60:218,6,0	1/1:23,0:17:3.98:164,4,0	0/1:20,0:14:54.17:83,0,54	0/1:19,0:18:1.85:2,0,713	1/1:18,0:18:18.04:60,18,0	1/1:22,0:15:3.23:22,3,0	0/1:23,0:23:56.05:56,0,90	1/1:17,0:17:1.29:6,1,0	0/1:37,0:29:27.53:28,0,918	0/1:20,0:20:43.52:88,0,44	1/1:16,0:8:5.65:76,6,0	0/1:26,1:24:8.90:230,0,9	./.
chr10	18980501	.	GAGAGAGAGAGAGA	G	2244.08	PASS	AB=0.960;AC=36;AF=0.692;AN=52;BaseQRankSum=2.077;DP=581;FS=5.565;HRun=0;HaplotypeScore=167.2279;InbreedingCoeff=0.0325;MQ=56.12;MQ0=76;MQRankSum=2.690;QD=4.91;ReadPosRankSum=-0.429;VQSLOD=2.4766;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:18:0.37:0,0,14	1/1:6,0:4:2.33:37,2,0	0/0:31,0:15:35.70:0,36,409	0/0:38,0:16:34.19:0,34,382	1/1:22,1:20:2.81:38,3,0	0/1:32,0:31:99:111,0,146	0/1:26,0:23:55.77:56,0,342	0/1:37,0:36:35:35,0,353	1/1:8,8:13:5.62:108,6,0	0/1:9,8:16:99:177,0,118	1/1:11,0:4:5.57:76,6,0	./.	1/1:11,10:17:12.04:430,12,0	1/1:5,5:9:2.67:113,3,0	0/0:15,0:15:1.98:0,2,150	1/1:8,9:13:5.60:219,6,0	1/1:13,9:16:4.72:204,5,0	1/1:12,7:13:4.69:130,5,0	0/1:19,0:18:1.96:2,0,586	1/1:18,0:19:22.78:76,23,0	1/1:21,0:16:6.40:31,6,0	0/1:23,0:23:56.05:56,0,66	1/1:17,0:17:0.73:5,1,0	0/1:37,0:29:27.53:28,0,767	0/1:20,0:20:19.68:89,0,20	1/1:15,0:7:5.99:76,6,0	1/1:14,13:23:7.91:299,8,0	./.
chr10	18980513	.	GA	G	2059.92	PASS	AB=0.974;AC=42;AF=0.808;AN=52;BaseQRankSum=0.432;DP=550;FS=6.355;HRun=2;HaplotypeScore=108.3791;InbreedingCoeff=0.2502;MQ=69.18;MQ0=71;MQRankSum=-0.177;QD=5.05;ReadPosRankSum=3.298;VQSLOD=0.7814;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	1/1:1,4:4:9.03:114,9,0	0/0:37,0:21:51.27:0,51,599	0/0:53,0:28:53.31:0,53,611	1/1:18,0:15:2.67:38,3,0	1/1:31,0:30:45.49:246,45,0	1/1:24,1:22:2.11:81,2,0	0/1:32,0:31:99:101,0,221	1/1:11,1:9:6.02:72,6,0	0/1:11,0:10:24.01:78,0,24	1/1:4,7:5:9.03:114,9,0	./.	1/1:16,0:12:11.62:83,12,0	1/1:6,0:5:2.98:21,3,0	0/0:16,0:16:2.39:0,2,12	1/1:14,0:10:5.68:28,6,0	1/1:17,0:11:8.86:89,9,0	1/1:14,0:10:11.82:106,12,0	0/1:18,1:18:90.77:91,0,128	1/1:18,1:19:31.45:134,31,0	1/1:22,0:18:33.51:200,34,0	1/1:20,0:20:30.07:126,30,0	1/1:26,0:26:1.38:6,1,0	0/1:33,2:29:50.73:57,0,51	1/1:21,1:22:47.81:164,48,0	1/1:7,4:4:12.04:152,12,0	1/1:15,0:14:8.70:67,9,0	1/1:1,5:4:3.01:38,3,0
chr10	18980514	.	A	AAG	6361.15	PASS	AB=0.900;AC=29;AF=0.580;AN=50;BaseQRankSum=-5.714;DP=549;FS=6.577;HRun=0;HaplotypeScore=101.3021;InbreedingCoeff=0.6523;MQ=72.01;MQ0=70;MQRankSum=-0.766;QD=20.86;ReadPosRankSum=0.107;VQSLOD=5.1074;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	1/1:5,0:4:2.92:17,3,0	0/0:38,0:22:43.74:0,44,444	0/0:55,0:30:37.09:0,37,496	0/1:16,0:15:0.01:0,0,0	1/1:28,0:27:50.89:737,51,0	1/1:26,0:23:48.08:709,48,0	1/1:32,0:31:60.20:944,60,0	0/0:10,0:9:0.89:0,1,2	0/0:12,0:11:5.79:0,6,38	./.	./.	0/0:14,0:12:8.91:0,9,41	0/0:6,0:5:2.80:0,3,13	1/1:1,16:18:2.99:51,3,0	0/0:12,0:11:5.60:0,6,27	0/0:14,0:11:2.11:0,2,12	0/0:9,0:10:3.27:0,3,15	1/1:10,7:16:13.33:331,13,0	1/1:19,0:19:39.11:572,39,0	1/1:21,1:17:36.03:426,36,0	1/1:20,0:20:48.14:724,48,0	1/1:5,21:26:2.67:27,3,0	1/1:35,0:29:57.19:835,57,0	1/1:22,0:22:60.20:960,60,0	1/1:8,0:4:2.84:14,3,0	0/0:14,0:14:5.60:0,6,26	1/1:6,0:4:2.84:14,3,0
chr10	18980522	.	G	GAG	6777.83	PASS	AB=1.000;AC=29;AF=0.604;AN=48;BaseQRankSum=-5.527;DP=580;FS=6.521;HRun=0;HaplotypeScore=114.4469;InbreedingCoeff=0.6601;MQ=82.56;MQ0=43;MQRankSum=-1.440;QD=22.52;ReadPosRankSum=0.480;VQSLOD=5.4742;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	1/1:5,0:5:2.92:17,3,0	0/0:42,0:26:43.74:0,44,444	0/0:65,0:40:37.08:0,37,496	./.	1/1:27,0:27:57.09:806,57,0	1/1:24,0:23:48.08:709,48,0	1/1:32,0:31:75.18:1115,75,0	0/0:15,0:13:0.89:0,1,2	0/0:15,0:15:5.79:0,6,38	./.	./.	0/0:17,0:15:8.91:0,9,41	0/0:7,0:7:2.80:0,3,13	1/1:18,0:18:2.99:51,3,0	0/0:18,0:15:5.60:0,6,27	0/1:17,0:12:3.20:3,0,8	0/0:14,0:11:4.04:0,4,17	1/1:24,0:23:25.34:473,25,0	1/1:15,0:15:39.11:572,39,0	1/1:20,0:19:36.03:425,36,0	1/1:20,0:20:48.14:724,48,0	1/1:28,0:28:5.68:58,6,0	1/1:29,0:27:57.19:835,57,0	1/1:25,0:25:60.20:960,60,0	1/1:9,0:6:2.84:14,3,0	0/0:17,0:16:5.60:0,6,26	1/1:8,0:7:2.84:14,3,0
chr10	18983815	.	T	TCATGA	35557.02	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=4.309;DP=520;FS=0.000;HRun=0;HaplotypeScore=210.8707;InbreedingCoeff=0.9313;MQ=73.54;MQ0=0;MQRankSum=-9.811;QD=74.39;ReadPosRankSum=7.122;VQSLOD=5.5813;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:12,8:20:36.11:1040,36,0	1/1:3,5:8:18.06:552,18,0	0/0:16,0:16:43.34:0,43,747	0/0:26,0:26:57.64:0,58,1091	1/1:1,10:11:24.08:737,24,0	1/1:4,7:11:30.10:872,30,0	1/1:4,13:17:45.15:1339,45,0	1/1:10,5:15:36.69:1028,37,0	1/1:13,12:25:66.23:2021,66,0	1/1:5,16:21:57.65:1692,58,0	1/1:1,7:8:15.05:460,15,0	1/1:5,27:33:99:3043,99,0	1/1:4,17:21:63.22:1896,63,0	1/1:7,15:22:57.18:1674,57,0	1/1:6,16:22:63.22:1882,63,0	1/1:3,22:25:72.25:2230,72,0	1/1:6,13:19:45.15:1338,45,0	1/1:5,10:15:42.10:1166,42,0	1/1:13,6:19:38.92:1109,39,0	1/1:14,11:25:42.14:1296,42,0	1/1:9,13:22:45.05:1389,45,0	1/1:6,14:20:39.13:1195,39,0	1/1:6,15:22:50.72:1489,51,0	1/1:5,5:11:18.02:480,18,0	1/1:6,6:12:24.08:737,24,0	1/1:5,26:31:93.31:2839,93,0	1/1:3,18:21:60.21:1864,60,0	1/1:0,2:2:6.02:188,6,0
chr10	18983816	.	C	CA	8854.46	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=8.828;DP=408;FS=2.238;HRun=0;HaplotypeScore=225.1657;InbreedingCoeff=0.9173;MQ=78.75;MQ0=0;MQRankSum=-9.774;QD=24.00;ReadPosRankSum=8.475;VQSLOD=4.0154;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:11:24.01:212,24,0	1/1:5,0:5:15.01:134,15,0	0/0:15,0:15:42.09:0,42,517	0/0:24,0:24:57.06:0,57,718	1/1:10,0:10:24:212,24,0	1/1:8,0:8:24.03:238,24,0	1/1:13,0:13:38.98:338,39,0	1/1:7,0:7:17.99:155,18,0	1/1:12,6:18:45.04:446,45,0	1/1:18,0:18:35.70:407,36,0	1/1:7,0:7:15:132,15,0	1/1:28,1:29:86.83:762,87,0	1/1:19,0:19:54.02:497,54,0	1/1:16,0:16:48:422,48,0	1/1:17,0:17:51.02:469,51,0	1/1:23,1:24:69.04:618,69,0	1/1:15,0:15:33:291,33,0	1/1:12,0:12:35.99:333,36,0	1/1:10,0:10:18:156,18,0	1/1:11,4:15:39.03:359,39,0	1/1:17,0:17:41.94:357,42,0	1/1:15,0:15:38.99:341,39,0	1/1:18,0:18:41.24:388,41,0	1/1:8,0:8:17.97:152,18,0	1/1:6,2:8:21.02:202,21,0	1/1:28,0:28:74.12:718,74,0	1/1:19,0:19:51.03:463,51,0	1/1:2,0:2:6:53,6,0
chr10	18983818	.	C	CCAGA	33764.31	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=2.661;DP=532;FS=3.724;HRun=0;HaplotypeScore=216.5052;InbreedingCoeff=0.9249;MQ=70.11;MQ0=0;MQRankSum=-9.956;QD=68.49;ReadPosRankSum=8.007;VQSLOD=5.0952;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:11,8:19:33.09:840,33,0	1/1:2,5:7:18.06:502,18,0	0/0:14,0:14:41.17:0,41,749	0/0:25,0:25:61.98:0,62,1094	1/1:4,10:14:24.08:658,24,0	1/1:3,7:10:18.20:659,18,0	1/1:7,13:20:60.21:1640,60,0	1/1:21,5:26:72.25:1961,72,0	1/1:11,12:23:44.32:1397,44,0	1/1:7,17:24:69.24:1908,69,0	1/1:0,7:7:15.05:410,15,0	1/1:7,28:35:96.97:2732,97,0	1/1:6,17:23:69.24:1875,69,0	1/1:4,15:19:54.19:1485,54,0	1/1:4,16:20:57.20:1560,57,0	1/1:4,22:26:69.88:1947,70,0	1/1:6,13:19:42.14:1123,42,0	1/1:4,10:14:30.19:947,30,0	1/1:8,6:14:42.09:974,42,0	1/1:7,11:18:34.35:951,34,0	1/1:11,13:24:60.19:1570,60,0	1/1:7,14:21:42.14:1150,42,0	1/1:5,17:22:50.98:1402,51,0	1/1:4,6:10:15.05:410,15,0	1/1:10,6:16:29.85:913,30,0	1/1:10,27:37:99:2942,108,0	1/1:5,18:23:60.21:1638,60,0	1/1:0,2:2:6.02:168,6,0
chr10	18984235	.	G	GTC	2078.39	PASS	AC=22;AF=0.423;AN=52;BaseQRankSum=9.848;DP=596;FS=3.856;HRun=0;HaplotypeScore=138.0622;InbreedingCoeff=0.9088;MQ=49.88;MQ0=33;MQRankSum=-5.608;QD=10.39;ReadPosRankSum=1.711;VQSLOD=3.6516;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:35,2:35:9.03:159,9,0	1/1:11,0:10:14.24:107,14,0	0/0:18,0:11:14.98:0,15,182	0/0:22,0:16:29.42:0,29,358	./.	0/0:26,0:26:57.02:0,57,779	0/0:18,0:14:10.95:0,11,200	0/0:25,0:22:54.17:0,54,698	./.	1/1:15,1:15:42.10:532,42,0	1/1:14,1:15:12.04:139,12,0	0/0:25,0:23:16.29:0,16,209	1/1:22,0:22:17.54:122,18,0	1/1:18,0:18:6.02:87,6,0	0/0:26,0:26:72.19:0,72,945	0/0:23,0:19:0.34:0,0,1	1/1:15,0:11:14.91:125,15,0	1/1:10,0:9:9.03:105,9,0	0/0:34,0:29:69.10:0,69,819	0/0:25,0:23:50.66:0,51,729	0/0:17,0:14:30.10:0,30,412	0/0:22,0:22:9.02:0,9,107	0/0:32,0:30:51.04:0,51,698	0/0:31,0:27:24.08:0,24,328	0/0:19,0:18:33.07:0,33,431	1/1:24,0:23:48.79:434,49,0	1/1:20,1:19:35.55:364,36,0	1/1:11,0:11:17.57:110,18,0
chr10	18984237	.	CTCTG	C	3152.32	PASS	AC=24;AF=0.462;AN=52;BaseQRankSum=8.764;DP=595;FS=3.834;HRun=0;HaplotypeScore=145.0061;InbreedingCoeff=0.9157;MQ=48.87;MQ0=36;MQRankSum=-4.226;QD=14.07;ReadPosRankSum=2.055;VQSLOD=3.3837;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,0:35:9.02:97,9,0	1/1:4,7:10:14.43:147,14,0	0/0:15,0:9:14.98:0,15,224	0/0:22,0:16:29.37:0,29,438	./.	0/0:26,0:26:57.19:0,57,1262	0/0:20,0:14:17.92:0,18,391	0/0:25,0:22:57.19:0,57,967	./.	1/1:16,0:15:42.13:606,42,0	1/1:15,0:15:12.04:155,12,0	0/0:25,0:23:17.99:0,18,275	1/1:4,17:21:18.06:319,18,0	1/1:11,8:19:7.58:100,8,0	0/0:26,0:26:71.47:0,71,1590	1/1:6,16:18:0.24:1,0,0	1/1:15,0:11:11.61:150,12,0	1/1:3,7:9:9.03:132,9,0	0/0:32,0:27:69.21:0,69,1217	0/0:24,0:22:57:0,57,1173	0/0:17,0:14:30.10:0,30,729	0/0:23,0:23:9.02:0,9,146	0/0:33,0:31:51.17:0,51,1209	0/0:30,0:27:24.08:0,24,453	0/0:19,0:18:33.07:0,33,732	1/1:6,18:23:47.86:808,48,0	1/1:18,4:20:38.14:550,38,0	1/1:2,9:11:18.05:293,18,0
chr10	18984239	.	CTG	C	2410.12	PASS	AC=20;AF=0.385;AN=52;BaseQRankSum=9.658;DP=592;FS=2.340;HRun=0;HaplotypeScore=135.0356;InbreedingCoeff=0.8659;MQ=48.59;MQ0=38;MQRankSum=-4.371;QD=14.79;ReadPosRankSum=1.752;VQSLOD=3.5124;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:34:3.13:0,3,11	1/1:9,1:9:14.40:155,14,0	0/0:15,0:9:8.19:0,8,186	0/0:22,0:16:23.70:0,24,453	./.	0/0:26,0:26:57.15:0,57,1047	0/0:21,0:14:17.54:0,18,299	0/0:25,0:22:60.06:0,60,966	./.	1/1:5,11:15:36.39:496,36,0	1/1:3,12:15:9.50:129,10,0	0/0:25,0:23:17.99:0,18,294	1/1:21,1:21:18.06:229,18,0	1/1:10,9:19:7.79:61,8,0	0/0:26,0:26:54.20:0,54,1314	0/0:17,3:16:0:0,0,0	1/1:8,7:11:11.83:156,12,0	1/1:8,2:9:8.97:96,9,0	0/0:31,0:26:69.19:0,69,1132	0/0:23,0:21:56.67:0,57,1009	0/0:17,0:14:30.10:0,30,578	0/0:24,0:24:2.10:0,2,127	0/0:33,0:31:51.17:0,51,972	0/0:31,0:27:24.08:0,24,431	0/0:20,0:19:33.07:0,33,587	1/1:21,2:22:38.85:610,39,0	1/1:8,14:20:31.72:457,32,0	1/1:9,2:11:18.05:220,18,0
chr10	18984251	.	CTG	C	376.33	PASS	AB=0.991;AC=18;AF=0.346;AN=52;BaseQRankSum=8.345;DP=588;FS=25.837;HRun=0;HaplotypeScore=140.3918;InbreedingCoeff=0.4222;MQ=43.77;MQ0=45;MQRankSum=-4.150;QD=1.72;ReadPosRankSum=-0.423;VQSLOD=0.9787;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:36:3.31:0,3,14	0/1:13,0:12:17.59:60,0,18	0/0:7,0:2:5.96:0,6,43	0/0:7,0:4:9.01:0,9,91	./.	0/0:24,0:24:25.75:0,26,411	0/0:25,0:16:17.90:0,18,209	0/0:23,0:20:50.48:0,50,406	./.	0/1:15,0:14:19.40:73,0,19	0/1:16,0:16:4.32:4,0,5	0/1:27,0:25:20.36:20,0,42	1/1:19,2:19:11.20:59,11,0	1/1:20,1:21:5.95:25,6,0	0/0:24,0:24:31.56:0,32,648	0/1:19,0:15:0.02:0,0,0	0/1:17,1:14:1.72:31,0,2	1/1:10,1:10:2.11:61,2,0	0/0:23,0:20:52.45:0,52,484	0/0:26,0:23:38.88:0,39,409	0/0:20,0:15:29.94:0,30,299	0/0:26,0:26:3.07:0,3,10	0/0:32,0:30:48.02:0,48,573	0/0:37,0:31:0.87:0,1,145	0/0:17,0:16:24:0,24,292	1/1:24,0:23:14.34:93,14,0	1/1:25,0:23:6.06:91,6,0	1/1:9,0:9:7.18:18,7,0
chr10	18984257	.	C	CTG	1743.88	PASS	AB=0.800;AC=24;AF=0.429;AN=56;BaseQRankSum=-9.042;DP=582;FS=1.135;HRun=0;HaplotypeScore=137.2124;InbreedingCoeff=0.5547;MQ=43.21;MQ0=45;MQRankSum=4.096;QD=5.17;ReadPosRankSum=0.416;VQSLOD=2.6124;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:34:8.97:0,9,44	0/0:12,0:11:18.15:0,18,144	0/0:4,0:1:3:0,3,25	0/0:5,0:1:3.01:0,3,39	0/0:21,0:20:5.88:0,6,36	1/1:27,0:26:10.01:260,10,0	1/1:28,0:19:9.25:69,9,0	1/1:24,0:20:29.57:213,30,0	0/0:21,0:20:1.22:0,1,20	0/0:16,0:15:37.38:0,37,341	0/0:17,0:17:8.60:0,9,68	0/1:6,20:24:18.70:69,0,19	0/0:18,0:16:16.32:0,16,143	0/0:19,0:19:5.60:0,6,37	1/1:22,1:23:29.37:333,29,0	0/1:17,0:14:0.34:0,0,1	0/0:20,0:16:18.96:0,19,110	0/1:12,0:11:18.42:18,0,41	1/1:20,0:17:2.68:152,3,0	1/1:26,0:23:11.24:196,11,0	1/1:22,0:17:10.02:127,10,0	1/1:3,25:28:4.26:56,4,0	1/1:31,0:29:31.02:284,31,0	0/1:15,17:29:30.78:31,0,81	1/1:18,0:17:15.91:124,16,0	0/0:23,0:22:54.52:0,55,434	0/0:22,0:20:40:0,40,259	0/0:9,0:9:17.89:0,18,175
chr10	18984469	.	TACACACACACAC	T	6233.14	PASS	AB=0.813;AC=24;AF=0.429;AN=56;BaseQRankSum=2.373;DP=629;FS=4.213;HRun=0;HaplotypeScore=203.3721;InbreedingCoeff=0.7893;MQ=61.63;MQ0=11;MQRankSum=-5.264;QD=18.61;ReadPosRankSum=-3.080;VQSLOD=3.5603;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:54:27.29:0,27,2859	0/0:3,0:3:6.02:0,6,188	0/0:26,0:14:11.90:0,12,99	0/0:30,0:25:15.03:0,15,151	0/0:11,0:11:12.20:0,12,340	1/1:3,18:21:21.07:670,21,0	1/1:11,15:26:6.49:149,6,0	1/1:14,18:32:50.87:650,51,0	0/0:10,0:10:23.91:0,24,675	0/0:18,0:18:33.02:0,33,972	0/0:18,0:18:15.72:0,16,305	1/1:5,17:22:16.62:657,17,0	0/0:23,0:22:20.97:0,21,456	0/0:28,0:28:43.17:0,43,949	1/1:11,18:29:24.91:727,25,0	0/0:21,0:20:45:0,45,1455	0/0:14,0:14:23.67:0,24,470	0/1:21,0:19:23.73:24,0,1086	1/1:9,9:18:7.31:468,7,0	1/1:3,9:12:20.95:381,21,0	0/1:23,34:56:16:77,0,16	1/1:5,21:26:38.82:878,39,0	1/1:10,10:20:23.78:628,24,0	1/1:11,23:34:11.98:217,12,0	1/1:4,12:16:21.07:707,21,0	0/0:18,0:18:39.09:0,39,1111	0/0:15,0:13:17.95:0,18,266	0/0:5,0:5:12.04:0,12,456
chr10	18984497	.	C	CACAA	1545.23	PASS	AB=0.951;AC=12;AF=0.214;AN=56;BaseQRankSum=2.070;DP=779;FS=3.302;HRun=0;HaplotypeScore=199.6390;InbreedingCoeff=-0.1030;MQ=51.90;MQ0=13;MQRankSum=-0.835;QD=6.11;ReadPosRankSum=-2.409;VQSLOD=2.5772;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:51,0:51:99:127,0,276	0/1:7,0:7:47.61:105,0,48	0/0:25,0:7:4.37:0,4,61	0/0:19,0:8:15.01:0,15,152	0/1:17,0:17:99:128,0,122	0/0:26,0:26:35.81:0,36,307	0/0:37,0:37:50.71:0,51,396	0/0:35,0:33:58.92:0,59,454	0/1:30,0:30:40.80:41,0,41	0/1:26,0:26:16.05:329,0,16	0/1:22,0:21:26.97:126,0,27	0/0:35,0:36:39.49:0,39,441	0/1:29,0:29:31.92:32,0,43	0/1:30,0:30:99:259,0,250	0/0:29,0:29:39.81:0,40,355	0/0:25,0:24:0.19:0,0,134	0/0:10,16:27:5.85:0,6,214	0/0:26,0:24:29.38:0,29,232	0/0:17,0:14:16.28:0,16,131	0/0:23,0:22:44.72:0,45,355	0/0:79,0:78:70.80:0,71,558	0/0:37,0:37:52.48:0,52,413	0/0:20,0:20:41.32:0,41,313	0/0:43,0:43:27.56:0,28,227	0/0:22,0:22:31.21:0,31,295	0/1:8,0:18:99:303,0,203	1/1:11,0:9:15.38:116,15,0	0/1:9,1:10:33.14:134,0,33
chr10	18984503	.	A	AACACAC	4580.61	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=-1.738;DP=828;FS=2.404;HRun=0;HaplotypeScore=226.7245;InbreedingCoeff=0.7133;MQ=54.42;MQ0=11;MQRankSum=1.310;QD=14.59;ReadPosRankSum=-0.389;VQSLOD=4.3712;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:55,0:55:99:127,0,356	1/1:8,0:8:18.06:287,18,0	0/0:29,0:10:5.40:0,5,126	0/0:23,0:11:23.54:0,24,255	1/1:18,0:18:26.95:374,27,0	0/0:27,0:27:45.04:0,45,667	0/0:39,0:39:73.84:0,74,903	0/0:37,0:35:33.09:0,33,694	0/1:31,0:31:59.38:59,0,92	1/1:5,16:24:57.52:914,58,0	1/1:19,0:18:18.05:269,18,0	0/0:40,0:40:76.27:0,76,1009	1/1:5,21:27:17.94:284,18,0	1/1:33,0:33:62.22:874,62,0	0/0:35,0:35:62.99:0,63,826	0/0:25,0:24:8.45:0,8,270	1/1:27,1:28:11.23:68,11,0	0/1:26,0:25:19.12:19,0,102	0/0:19,0:16:3.04:0,3,218	0/0:23,0:23:51.09:0,51,758	0/0:88,0:88:99:0,121,1476	0/0:38,0:38:74.32:0,74,886	0/0:22,0:22:42.02:0,42,552	0/0:44,0:44:40.60:0,41,526	0/0:23,0:23:40.50:0,41,579	1/1:22,0:21:42.01:684,42,0	1/1:10,0:9:24.04:362,24,0	1/1:2,10:12:9.03:259,9,0
chr10	18984512	.	A	ACA	3116.15	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=2.534;DP=855;FS=10.808;HRun=0;HaplotypeScore=199.4897;InbreedingCoeff=0.8436;MQ=56.65;MQ0=11;MQRankSum=2.966;QD=9.01;ReadPosRankSum=3.010;VQSLOD=2.6199;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:58,0:58:48.39:1066,48,0	1/1:7,0:7:1.40:7,1,0	0/0:37,0:18:14.17:0,14,121	0/0:31,0:16:18.85:0,19,236	1/1:20,0:20:1.90:28,2,0	0/0:25,0:25:45.04:0,45,490	0/0:37,0:37:73.70:0,74,733	0/0:35,0:33:54.04:0,54,612	1/1:12,20:33:24.94:160,25,0	1/1:29,0:29:36.90:225,37,0	1/1:18,0:18:0.03:0,0,0	0/0:38,0:38:78.08:0,78,851	1/1:27,0:27:12.40:75,12,0	1/1:30,0:29:12.58:114,13,0	0/0:35,0:35:62.96:0,63,623	1/1:26,0:25:18.49:559,18,0	1/1:32,0:32:4.45:30,4,0	1/1:25,0:24:55.58:777,56,0	0/0:17,0:14:3.28:0,3,210	0/0:23,0:23:51.08:0,51,586	0/0:93,0:93:99:0,126,1324	0/0:38,0:38:74.61:0,75,728	0/0:26,0:26:41.92:0,42,466	0/0:48,0:48:41.11:0,41,432	0/0:26,0:26:40.32:0,40,436	1/1:19,0:18:23.84:177,24,0	1/1:11,0:10:6.39:37,6,0	1/1:11,0:11:8.94:69,9,0
chr10	18987468	.	A	AT	14679.31	PASS	AB=1.000;AC=47;AF=0.839;AN=56;BaseQRankSum=8.716;DP=614;FS=11.338;HRun=4;HaplotypeScore=130.9556;InbreedingCoeff=0.8574;MQ=72.86;MQ0=0;MQRankSum=-4.042;QD=27.70;ReadPosRankSum=3.819;VQSLOD=3.1857;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:91.90:0,92,1122	1/1:0,15:15:39.13:510,39,0	0/0:18,0:17:25.21:0,25,323	0/0:13,0:13:24.06:0,24,269	1/1:4,29:34:77.02:958,77,0	1/1:3,17:20:46.50:566,47,0	1/1:2,17:19:42.60:523,43,0	1/1:6,29:35:94.59:1074,95,0	0/0:17,0:17:48.12:0,48,529	1/1:6,26:32:78.18:944,78,0	1/1:3,17:20:52.33:630,52,0	1/1:1,16:18:48.04:559,48,0	1/1:4,15:19:42.61:551,43,0	1/1:1,18:20:45.14:578,45,0	1/1:4,10:14:31.98:379,32,0	1/1:29,0:29:1.13:24,1,0	1/1:0,32:32:81.26:1055,81,0	0/1:17,0:17:2.44:39,0,2	1/1:6,14:21:48.05:547,48,0	1/1:2,29:32:87.66:1052,88,0	1/1:3,10:13:27.56:339,28,0	1/1:2,13:15:39.07:462,39,0	1/1:4,18:23:55.52:649,56,0	1/1:1,14:15:27.09:334,27,0	1/1:1,16:17:49.40:602,49,0	1/1:0,22:22:66.16:812,66,0	1/1:1,33:35:87.28:1134,87,0	1/1:4,9:13:27.09:355,27,0
chr10	18989246	.	G	GTATT	22971.49	PASS	AB=0.944;AC=29;AF=0.518;AN=56;BaseQRankSum=4.227;DP=718;FS=6.413;HRun=0;HaplotypeScore=137.1643;InbreedingCoeff=0.9282;MQ=82.82;MQ0=0;MQRankSum=-13.367;QD=58.60;ReadPosRankSum=-2.477;VQSLOD=5.3220;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,35:46:99:2596,102,0	0/0:12,0:12:36.12:0,36,672	0/0:22,0:22:51.35:0,51,950	0/0:29,0:29:80.30:0,80,1366	0/0:19,0:19:57.18:0,57,1026	1/1:4,26:30:81.23:2096,81,0	1/1:5,18:23:63.17:1447,63,0	1/1:14,18:32:78.27:2066,78,0	1/1:3,24:28:78.19:1958,78,0	0/0:26,0:26:78.27:0,78,1452	0/0:16,0:16:45.15:0,45,840	1/1:3,24:29:81.20:2031,81,0	0/0:31,0:31:90.28:0,90,1599	0/0:29,0:29:75.26:0,75,1388	1/1:5,27:34:87.17:2092,87,0	0/1:16,1:17:28.87:29,0,845	0/0:48,0:48:99:0,132,2457	0/0:32,0:32:87.30:0,87,1612	1/1:6,6:13:30.09:678,30,0	1/1:6,13:20:48.12:1089,48,0	1/1:4,27:32:79.03:1855,79,0	1/1:6,20:29:69.71:1750,70,0	1/1:2,16:19:48.12:1172,48,0	1/1:3,21:25:47.79:1219,48,0	1/1:2,11:15:36.08:895,36,0	0/0:25,0:24:63.21:0,63,1148	0/0:27,0:27:72:0,72,1337	0/0:10,0:10:24.07:0,24,417
chr10	18990186	.	G	GCTTTTGAGAAATCTA	86626.06	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-0.771;DP=667;FS=16.200;HRun=0;HaplotypeScore=263.1391;InbreedingCoeff=0.9908;MQ=71.35;MQ0=0;MQRankSum=-15.628;QD=157.79;ReadPosRankSum=-0.188;VQSLOD=3.1900;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,153,6098	1/1:7,5:12:33.07:2053,33,0	0/0:24,0:24:60.18:0,60,1794	0/0:18,0:17:41.48:0,41,1280	1/1:17,10:30:75.26:4404,75,0	1/1:9,10:19:54.19:3778,54,0	1/1:11,11:27:66.23:4486,66,0	1/1:29,1:34:90.30:5211,90,0	0/0:23,0:23:66.23:0,66,2944	1/1:12,7:20:54.15:3512,54,0	1/1:15,6:23:57.16:3395,57,0	1/1:9,8:19:45.15:3279,45,0	1/1:14,4:18:54.19:3294,54,0	1/1:12,9:22:54.19:3571,54,0	1/1:18,11:31:84.25:5501,84,0	1/1:13,14:31:72.06:5138,72,0	1/1:19,7:26:63.16:4000,63,0	1/1:10,7:21:39.13:2625,39,0	1/1:17,3:20:54.19:2994,54,0	1/1:12,10:22:60.21:3801,60,0	1/1:14,2:17:39.10:2059,39,0	1/1:23,11:37:99:6120,102,0	1/1:14,11:27:66.70:3976,67,0	1/1:9,5:15:24.03:1485,24,0	1/1:15,11:29:75.08:4300,75,0	1/1:15,8:26:78.24:4625,78,0	1/1:13,1:16:39.13:2124,39,0	1/1:0,4:4:12.04:893,12,0
chr10	18990702	.	G	GA	16124.05	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-17.722;DP=722;FS=0.000;HRun=1;HaplotypeScore=74.2267;InbreedingCoeff=0.9997;MQ=63.34;MQ0=0;MQRankSum=-1.034;QD=39.62;ReadPosRankSum=1.792;VQSLOD=5.4655;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,55:58:99:2247,151,0	0/0:18,0:18:54.18:0,54,698	0/0:23,0:21:51.10:0,51,626	0/0:18,0:16:45.13:0,45,553	0/0:21,0:21:60.19:0,60,779	1/1:1,20:21:57.19:854,57,0	1/1:2,19:21:57.19:855,57,0	1/1:2,29:31:87.27:1272,87,0	1/1:0,34:34:93.32:1393,93,0	0/0:37,0:37:99:0,108,1401	0/0:19,0:19:54.18:0,54,700	1/1:0,16:16:42.14:630,42,0	0/0:24,0:24:69.21:0,69,880	0/0:17,0:17:51.17:0,51,662	1/1:1,21:22:60.20:900,60,0	0/0:22,0:22:66.21:0,66,857	0/0:28,0:28:81.23:0,81,1035	0/0:18,0:18:48.16:0,48,623	1/1:2,21:23:60.20:899,60,0	1/1:3,23:27:69.20:1003,69,0	1/1:3,42:45:99:1799,120,0	1/1:1,27:28:75.25:1124,75,0	1/1:0,21:21:60.20:899,60,0	1/1:0,35:35:81.27:1214,81,0	1/1:0,25:25:69.23:1034,69,0	0/0:38,0:38:99:0,108,1402	0/0:24,0:24:72.23:0,72,935	0/0:8,0:8:24.08:0,24,312
chr10	18991237	.	AT	A	2240.09	PASS	AB=0.744;AC=24;AF=0.429;AN=56;BaseQRankSum=5.951;DP=517;FS=5.541;HRun=14;HaplotypeScore=82.7418;InbreedingCoeff=0.5252;MQ=73.52;MQ0=1;MQRankSum=2.065;QD=7.89;ReadPosRankSum=0.880;VQSLOD=2.9404;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,2:21:0.88:0,1,293	0/0:6,0:6:12:0,12,107	0/0:17,1:16:16.51:0,17,190	0/1:19,1:16:34.15:34,0,75	0/0:15,1:16:18.43:0,18,304	1/1:3,10:14:25.83:170,26,0	1/1:7,12:19:4.89:178,5,0	1/1:16,14:31:37.63:252,38,0	0/0:19,1:19:21.34:0,21,320	0/0:18,0:18:21.02:0,21,195	0/0:21,0:22:45.32:0,45,398	0/1:6,16:23:3.51:261,0,4	0/0:11,0:12:35.71:0,36,288	0/0:16,2:19:27.21:0,27,366	1/1:5,12:19:35.12:235,35,0	0/0:13,0:13:9.30:0,9,208	0/0:24,1:25:36.47:0,36,477	0/1:14,3:17:22.77:23,0,225	0/1:8,14:22:9.10:224,0,9	1/1:4,13:17:32.16:225,32,0	1/1:2,6:8:11.88:82,12,0	1/1:4,7:11:17.08:122,17,0	0/1:5,9:14:50.76:131,0,51	1/1:2,13:16:34.76:232,35,0	1/1:5,16:21:16.78:260,17,0	0/1:26,2:30:13.72:14,0,318	0/0:19,1:21:27.30:0,27,380	0/0:21,0:21:56.96:0,57,508
chr10	18991436	.	T	TG	2168.39	PASS	AB=0.980;AC=26;AF=0.464;AN=56;BaseQRankSum=2.863;DP=463;FS=30.600;HRun=1;HaplotypeScore=84.7690;InbreedingCoeff=0.7630;MQ=51.07;MQ0=11;MQRankSum=-5.061;QD=11.29;ReadPosRankSum=-0.634;VQSLOD=0.1813;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:24:59.47:0,59,456	0/0:6,0:6:14.30:0,14,169	0/0:44,0:8:6.43:0,6,116	0/1:43,1:11:10.37:10,0,44	0/0:26,0:26:61.10:0,61,640	1/1:11,0:10:23.85:198,24,0	1/1:10,0:10:15.81:126,16,0	1/1:14,0:13:35.79:282,36,0	0/0:14,0:13:33.87:0,34,242	0/0:19,0:18:39.65:0,40,375	0/0:12,0:12:35.58:0,36,329	1/1:11,2:13:26.94:239,27,0	0/0:12,0:11:29.92:0,30,244	0/0:3,0:4:1.15:0,1,53	1/1:10,0:10:28.48:202,28,0	1/1:11,0:11:8.69:156,9,0	0/0:40,0:39:94.99:0,95,947	0/1:7,0:7:4.83:90,0,5	1/1:11,2:12:9.74:195,10,0	1/1:16,2:18:45.99:397,46,0	0/0:2,5:6:2.29:0,2,15	1/1:9,0:9:20.03:160,20,0	1/1:11,0:11:8.76:65,9,0	1/1:3,1:4:5.97:65,6,0	1/1:10,3:13:16.11:193,16,0	0/0:33,0:33:81.77:0,82,851	0/0:20,0:20:39.08:0,39,309	0/0:6,0:6:17.50:0,18,171
chr10	18991437	.	GTTTT	G	855.73	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=0.246;DP=478;FS=2.584;HRun=15;HaplotypeScore=106.4426;InbreedingCoeff=0.6161;MQ=49.84;MQ0=13;MQRankSum=-3.317;QD=16.46;ReadPosRankSum=-0.008;VQSLOD=1.8395;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,15:25:55.19:667,55,0	0/0:6,0:6:18.03:0,18,324	0/0:50,0:9:5.97:0,6,49	0/0:48,0:11:11.92:0,12,115	0/0:21,0:25:67.07:0,67,1230	0/0:11,0:10:19.80:0,20,209	0/0:12,0:12:15.93:0,16,159	0/0:14,0:13:23.57:0,24,184	1/1:9,5:12:30.95:305,31,0	0/0:16,0:17:36:0,36,606	0/0:10,0:12:35.30:0,35,554	0/0:14,0:14:14.74:0,15,120	0/0:11,0:11:21.02:0,21,295	0/0:3,0:4:9.03:0,9,163	0/0:11,0:11:17.95:0,18,247	0/1:10,0:10:10.80:11,0,52	0/0:37,0:40:99:0,102,1792	0/0:7,0:7:6.86:0,7,39	0/0:13,0:13:28.22:0,28,328	0/0:18,0:19:21.89:0,22,253	0/0:7,0:6:2.74:0,3,12	0/0:7,0:7:14.63:0,15,156	0/0:6,0:11:14.99:0,15,165	0/0:5,0:5:9.31:0,9,58	0/0:17,0:17:32.12:0,32,409	0/0:30,0:33:86.75:0,87,1375	0/0:15,0:18:33.98:0,34,550	0/0:6,0:6:16.84:0,17,228
chr10	18991467	.	G	GTT	918.20	PASS	AB=0.944;AC=24;AF=0.429;AN=56;BaseQRankSum=4.275;DP=472;FS=3.000;HRun=14;HaplotypeScore=89.0824;InbreedingCoeff=0.4371;MQ=40.84;MQ0=36;MQRankSum=-6.868;QD=4.10;ReadPosRankSum=-2.546;VQSLOD=-0.3886;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:10,13:25:28.92:540,29,0	0/1:3,0:6:6.16:6,0,39	0/0:64,0:7:11.52:0,12,85	0/1:67,0:9:3.31:3,0,22	0/0:22,0:24:38.18:0,38,282	1/1:11,0:10:4.87:14,5,0	0/1:14,0:12:1.72:12,0,2	1/1:8,0:4:3.68:15,4,0	1/1:7,5:10:20.29:213,20,0	0/0:15,0:15:27.18:0,27,276	0/0:18,0:18:23.15:0,23,241	1/1:12,0:12:11.74:77,12,0	0/0:11,0:10:14.91:0,15,122	0/0:7,0:8:5.58:0,6,29	0/1:5,0:5:0.51:3,0,1	0/1:9,0:9:3.25:24,0,3	0/0:31,0:33:49.47:0,49,405	0/0:8,0:7:2.38:0,2,8	1/1:11,0:9:5.80:52,6,0	0/0:13,0:13:1.05:0,1,4	0/1:3,0:1:0:0,0,0	1/1:3,0:3:5.72:31,6,0	1/1:7,0:7:3.01:36,3,0	0/0:6,0:6:1.80:0,2,5	0/1:20,0:20:0.23:33,0,0	0/0:26,0:26:15.34:0,15,235	0/0:15,0:17:9.38:0,9,139	0/1:7,1:7:24.30:24,0,85
chr10	18991945	.	AT	A	418.08	PASS	AB=0.905;AC=7;AF=0.125;AN=56;BaseQRankSum=5.494;DP=425;FS=8.340;HRun=10;HaplotypeScore=55.6294;InbreedingCoeff=0.5022;MQ=77.30;MQ0=1;MQRankSum=0.874;QD=5.73;ReadPosRankSum=1.656;VQSLOD=0.5538;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:20:37.01:0,37,185	0/0:5,0:7:20.72:0,21,194	0/0:23,0:19:2.61:0,3,211	0/1:21,1:15:0.04:0,0,206	0/0:14,0:14:36.09:0,36,391	0/0:18,0:18:39.11:0,39,431	0/0:15,0:15:45.08:0,45,484	0/0:24,0:24:21.29:0,21,446	0/0:2,0:15:24.65:0,25,120	0/0:15,0:15:42.11:0,42,465	0/0:11,0:11:15.04:0,15,166	0/0:8,0:8:24.06:0,24,264	0/1:8,1:9:8.01:8,0,148	0/0:10,0:10:30.07:0,30,323	0/0:13,0:13:30.08:0,30,332	1/1:4,11:15:26.97:234,27,0	0/0:20,0:20:57.15:0,57,629	1/1:3,12:15:32.97:286,33,0	0/0:27,0:26:57.15:0,57,623	0/0:17,0:17:42.11:0,42,463	0/0:9,0:9:24.06:0,24,265	0/0:10,0:10:27.04:0,27,275	0/0:11,1:12:4.04:0,4,273	0/0:10,0:10:21.06:0,21,232	0/1:10,2:12:21.99:22,0,235	0/0:19,1:20:25.12:0,25,505	0/0:21,0:22:27.31:0,27,459	0/0:12,0:12:29.50:0,30,292
chr10	18992717	.	G	GA	665.90	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=-3.727;DP=323;FS=0.000;HRun=6;HaplotypeScore=32.3598;InbreedingCoeff=0.7035;MQ=76.31;MQ0=0;MQRankSum=1.325;QD=16.65;ReadPosRankSum=0.784;VQSLOD=2.2450;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:60.11:0,60,603	0/0:6,0:6:18.04:0,18,184	0/0:7,0:6:9.90:0,10,94	0/1:13,0:10:17.59:18,0,75	0/0:10,0:10:27.06:0,27,275	0/0:18,0:18:45.10:0,45,459	0/0:4,0:4:12.03:0,12,122	0/0:35,0:35:87.18:0,87,888	0/0:8,0:8:24.05:0,24,245	0/0:11,0:11:33.07:0,33,337	0/0:11,0:11:24.05:0,24,245	0/0:11,0:11:30.07:0,30,306	0/0:9,0:9:27.06:0,27,275	0/0:8,0:8:21.05:0,21,214	0/0:7,0:7:21.05:0,21,214	1/1:2,8:10:24.05:286,24,0	0/0:20,0:20:57.13:0,57,582	1/1:1,15:16:39.12:491,39,0	0/0:18,0:18:51.10:0,51,515	0/0:4,0:4:12.03:0,12,122	0/0:7,0:7:21.05:0,21,214	0/0:3,0:3:9.02:0,9,92	0/0:4,0:4:12.03:0,12,122	0/0:6,0:6:15.02:0,15,146	0/0:18,0:18:48.09:0,48,484	0/0:9,0:9:24.05:0,24,245	0/0:17,0:17:42.09:0,42,428	0/0:8,0:8:24.05:0,24,245
chr10	18993200	.	TA	T	12148.60	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=13.447;DP=746;FS=10.703;HRun=2;HaplotypeScore=86.0624;InbreedingCoeff=0.9996;MQ=87.36;MQ0=0;MQRankSum=-4.137;QD=32.57;ReadPosRankSum=-0.092;VQSLOD=3.8183;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,135,2023	0/0:8,0:8:24.08:0,24,360	0/0:33,0:33:90.23:0,90,1272	0/0:19,0:19:54.13:0,54,742	0/0:31,0:31:90.28:0,90,1309	1/1:0,22:22:48.15:614,48,0	1/1:1,24:25:69.22:896,69,0	1/1:1,33:34:99:1267,99,0	0/0:31,0:31:93.31:0,93,1390	0/0:25,0:25:69.22:0,69,1002	0/0:18,0:18:54.17:0,54,789	1/1:2,21:23:60.19:779,60,0	0/0:24,0:24:72.24:0,72,1075	0/0:26,0:26:78.26:0,78,1169	1/1:1,31:32:90.29:1169,90,0	1/1:0,24:24:63.20:818,63,0	0/0:28,0:28:78.26:0,78,1161	1/1:0,21:21:60.20:779,60,0	1/1:4,25:29:66.18:827,66,0	1/1:0,18:18:30.04:373,30,0	1/1:1,43:44:99:1399,108,0	1/1:0,29:29:72.23:934,72,0	1/1:1,24:24:46.35:620,46,0	1/1:0,28:28:84.27:1091,84,0	1/1:0,19:19:45.15:584,45,0	0/0:35,0:35:99:0,102,1509	0/0:37,0:37:99:0,111,1603	0/0:11,0:11:33.06:0,33,431
chr10	18994353	.	C	CA	6782.28	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=7.212;DP=539;FS=12.318;HRun=7;HaplotypeScore=88.1192;InbreedingCoeff=0.9798;MQ=77.84;MQ0=1;MQRankSum=-0.122;QD=30.01;ReadPosRankSum=-0.420;VQSLOD=3.8126;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,1:23:7.64:0,8,354	0/0:8,0:8:18.03:0,18,174	0/0:30,0:24:39.97:0,40,375	0/0:43,0:39:12.88:0,13,548	0/0:21,0:21:57.04:0,57,541	1/1:0,16:16:42.13:507,42,0	1/1:3,12:15:30.09:362,30,0	1/1:7,23:30:66.17:773,66,0	0/0:13,0:13:39.03:0,39,369	0/0:33,0:33:90.12:0,90,862	0/0:15,0:15:42.07:0,42,406	1/1:1,10:11:27.08:326,27,0	0/0:17,0:17:42.07:0,42,406	0/0:9,0:9:27.04:0,27,261	1/1:1,13:14:36.11:435,36,0	1/1:0,10:10:27.08:326,27,0	0/0:32,0:32:75.11:0,75,723	1/1:2,28:30:75.23:906,75,0	1/1:1,15:16:45.14:544,45,0	1/1:2,29:31:87.26:1045,87,0	1/1:3,10:13:30.09:362,30,0	1/1:0,4:4:12.04:145,12,0	1/1:0,10:10:30.09:362,30,0	1/1:2,8:10:26.75:301,27,0	1/1:1,15:16:33.09:386,33,0	0/0:26,0:26:66.08:0,66,631	0/0:20,0:17:57.09:0,57,550	0/0:20,0:20:57.08:0,57,548
chr10	18995366	.	TA	T	13250.23	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=18.998;DP=721;FS=5.954;HRun=1;HaplotypeScore=92.2318;InbreedingCoeff=1.0000;MQ=84.63;MQ0=0;MQRankSum=-1.239;QD=38.97;ReadPosRankSum=2.156;VQSLOD=5.3364;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:57.19:0,57,910	0/0:16,0:16:48.16:0,48,758	0/0:23,0:23:69.23:0,69,1084	0/0:23,0:23:63.21:0,63,944	0/0:29,0:29:84.29:0,84,1342	1/1:0,38:38:99:1426,102,0	1/1:0,18:18:51.17:713,51,0	1/1:0,37:37:99:1377,102,0	0/0:34,0:34:99:0,102,1604	0/0:29,0:29:84.29:0,84,1342	0/0:14,0:14:42.13:0,42,646	1/1:0,30:30:90.30:1258,90,0	0/0:23,0:23:69.22:0,69,1073	0/0:18,0:18:54.18:0,54,860	1/1:0,52:52:99:2056,147,0	0/0:32,0:32:96.28:0,96,1439	0/0:27,0:27:81.25:0,81,1261	0/0:17,0:17:51.17:0,51,815	1/1:0,22:22:63.17:844,63,0	1/1:0,25:25:69.23:965,69,0	1/1:0,29:29:84.28:1175,84,0	1/1:0,25:25:72.24:1004,72,0	1/1:0,18:18:51.17:713,51,0	1/1:0,24:24:63.21:881,63,0	1/1:0,22:22:60.20:839,60,0	0/0:31,0:31:93.30:0,93,1443	0/0:24,0:24:72.25:0,72,1148	0/0:21,0:21:63.20:0,63,983
chr10	18996289	.	G	GT	6390.72	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=6.641;DP=475;FS=4.955;HRun=5;HaplotypeScore=90.3214;InbreedingCoeff=0.9453;MQ=66.68;MQ0=16;MQRankSum=-10.610;QD=27.55;ReadPosRankSum=1.337;VQSLOD=4.9321;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,15:16:47.94:631,48,0	0/0:8,0:8:24.07:0,24,288	0/0:51,0:18:9.23:0,9,305	0/0:49,0:23:14.43:0,14,231	0/0:19,0:19:54.15:0,54,631	1/1:3,24:27:80.29:1076,80,0	1/1:2,7:9:19.11:318,19,0	1/1:9,12:18:33.11:444,33,0	1/1:4,11:14:20:262,20,0	0/0:19,0:19:50.52:0,51,580	0/0:15,0:15:39.12:0,39,465	1/1:6,8:14:20.54:336,21,0	0/0:17,0:17:43.65:0,44,493	0/0:11,0:11:26.95:0,27,302	1/1:1,10:10:27.09:377,27,0	1/1:3,6:8:21.68:263,22,0	0/0:17,0:17:40.71:0,41,430	1/1:2,8:10:2.32:78,2,0	1/1:14,10:22:26.40:438,26,0	1/1:5,10:15:36.08:474,36,0	1/1:4,9:12:18.06:245,18,0	1/1:5,11:15:33.07:439,33,0	1/1:3,8:11:27.08:363,27,0	1/1:3,9:10:24.51:313,25,0	1/1:1,8:9:24.08:335,24,0	0/0:17,0:17:39.91:0,40,500	0/0:12,0:12:8.05:0,8,236	0/0:7,0:7:15.04:0,15,174
chr10	18996319	.	T	TG	1196.56	PASS	AB=0.734;AC=16;AF=0.286;AN=56;BaseQRankSum=11.575;DP=413;FS=0.000;HRun=0;HaplotypeScore=85.1296;InbreedingCoeff=0.2949;MQ=70.39;MQ0=6;MQRankSum=-11.066;QD=7.87;ReadPosRankSum=4.196;VQSLOD=3.3988;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:63.15:0,63,826	0/0:7,0:7:21.07:0,21,294	0/0:38,0:27:53.36:0,53,802	0/0:36,0:25:49.54:0,50,554	0/0:20,0:20:60.18:0,60,820	1/1:6,10:16:21.08:204,21,0	0/1:6,3:9:19.12:79,0,19	0/1:18,5:20:39.26:105,0,39	0/0:12,0:12:30.10:0,30,419	0/0:19,0:19:57.19:0,57,783	0/0:16,0:16:45.15:0,45,628	0/1:5,5:10:6.04:112,0,6	0/0:14,0:14:42.13:0,42,569	0/0:10,0:10:30.10:0,30,419	1/1:5,7:12:3.13:137,3,0	0/0:11,0:11:33.10:0,33,446	0/0:18,0:18:54.09:0,54,728	0/0:10,0:10:15.03:0,15,191	0/1:12,3:15:43.76:50,0,44	1/1:5,8:12:32.13:211,32,0	0/1:5,3:7:16.95:67,0,17	0/1:6,5:11:24.13:95,0,24	1/1:1,7:8:6.11:113,6,0	0/1:9,7:15:3.88:127,0,4	0/1:6,5:11:32.23:69,0,32	0/0:14,0:14:39.12:0,39,530	0/0:9,0:9:27.08:0,27,355	0/0:5,0:5:15.05:0,15,208
chr10	18996320	.	T	TTG	2017.81	PASS	AB=0.709;AC=14;AF=0.250;AN=56;BaseQRankSum=9.702;DP=416;FS=2.271;HRun=0;HaplotypeScore=92.5847;InbreedingCoeff=0.1988;MQ=71.38;MQ0=5;MQRankSum=-8.665;QD=12.93;ReadPosRankSum=3.765;VQSLOD=3.4126;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:63.14:0,63,896	0/0:7,0:7:21.07:0,21,321	0/0:39,0:28:35.26:0,35,850	0/0:35,0:25:42.15:0,42,668	0/0:19,0:19:57.19:0,57,871	1/1:6,10:16:14.08:317,14,0	0/1:6,2:9:53.66:95,0,54	0/1:18,5:20:46.30:240,0,46	0/0:12,0:12:30.10:0,30,459	0/0:20,0:20:57.19:0,57,853	0/0:16,0:16:45.15:0,45,689	0/1:5,5:10:16.29:174,0,16	0/0:13,0:13:39.13:0,39,595	0/0:10,0:10:30.10:0,30,448	0/1:5,7:12:28.24:198,0,28	0/0:11,0:11:33.10:0,33,486	0/0:18,0:18:51.17:0,51,780	0/0:10,0:10:15.05:0,15,221	0/1:12,3:15:81.48:94,0,81	1/1:6,8:13:15.77:272,16,0	0/1:5,3:7:1.05:105,0,1	0/1:7,5:12:45.26:122,0,45	0/1:2,7:9:1.46:177,0,1	0/1:10,7:16:4.70:219,0,5	0/1:6,5:11:9.06:171,0,9	0/0:14,0:14:42.13:0,42,606	0/0:9,0:9:27.08:0,27,389	0/0:5,0:5:15.05:0,15,228
chr10	18997250	.	A	ATAAACACGCTGCCT	45289.17	PASS	AB=0.957;AC=33;AF=0.589;AN=56;BaseQRankSum=-8.849;DP=633;FS=2.898;HRun=0;HaplotypeScore=183.1354;InbreedingCoeff=0.9247;MQ=81.83;MQ0=0;MQRankSum=-17.591;QD=113.51;ReadPosRankSum=1.231;VQSLOD=4.6364;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,11:33:57.15:3416,57,0	0/0:12,0:12:36.10:0,36,1185	0/0:18,0:18:42.14:0,42,1728	0/0:28,0:28:84.27:0,84,2946	0/0:28,0:28:84.26:0,84,3299	1/1:3,7:16:27.09:1761,27,0	1/1:4,8:16:36.12:2447,36,0	1/1:15,2:39:99:5303,102,0	1/1:6,10:28:45.05:2697,45,0	0/0:28,0:27:84.28:0,84,3317	0/0:17,0:17:51.18:0,51,2076	1/1:8,15:33:63.22:4293,63,0	0/0:19,0:19:57.20:0,57,2508	0/1:21,1:22:99:150,0,2390	1/1:6,12:26:51.17:3336,51,0	1/1:7,9:25:48.16:3149,48,0	0/0:26,0:26:78.27:0,78,3192	1/1:4,4:15:21.07:1508,21,0	1/1:5,5:13:39.13:2168,39,0	1/1:4,15:29:66.23:4171,66,0	1/1:9,4:17:27.09:1823,27,0	1/1:0,7:17:24.08:1547,24,0	1/1:6,12:26:42.01:2914,42,0	1/1:7,6:22:30.09:1761,30,0	1/1:2,12:22:41.93:2844,42,0	0/0:25,0:25:72.24:0,72,2872	0/0:25,0:25:75.26:0,75,2820	0/0:8,0:8:24.08:0,24,1062
chr10	18998207	.	TAC	T	1263.22	PASS	AB=0.939;AC=40;AF=0.769;AN=52;BaseQRankSum=-2.049;DP=401;FS=2.115;HRun=0;HaplotypeScore=74.2509;InbreedingCoeff=0.3819;MQ=62.16;MQ0=21;MQRankSum=0.767;QD=4.25;ReadPosRankSum=2.214;VQSLOD=2.2828;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,1:22:8.06:0,8,245	1/1:4,1:5:5.85:47,6,0	./.	./.	1/1:3,6:9:15.02:156,15,0	1/1:10,0:13:14.20:70,14,0	1/1:18,0:19:14.85:129,15,0	0/1:20,0:17:0.69:33,0,1	0/0:13,0:12:9.01:0,9,113	0/0:5,0:4:1.82:0,2,5	1/1:6,2:9:9.01:90,9,0	1/1:9,0:13:17.21:103,17,0	1/1:14,1:14:14.71:127,15,0	1/1:12,4:12:10.70:130,11,0	1/1:13,0:14:11.83:57,12,0	0/1:21,0:19:0:0,0,0	1/1:10,7:17:1.93:89,2,0	0/0:13,0:13:17.05:0,17,173	1/1:8,0:8:8.65:54,9,0	1/1:6,0:7:2.84:14,3,0	0/1:29,1:29:28.62:34,0,29	1/1:3,0:6:5.55:26,6,0	1/1:4,0:5:2.84:14,3,0	1/1:27,0:27:8.28:38,8,0	1/1:10,0:8:8.43:40,8,0	0/1:10,2:11:8.94:57,0,9	1/1:4,2:6:6.02:66,6,0	1/1:4,0:3:3.01:33,3,0
chr10	18998294	.	CACACAT	C	2849.43	PASS	AB=0.897;AC=21;AF=0.375;AN=56;BaseQRankSum=10.306;DP=797;FS=0.000;HRun=0;HaplotypeScore=201.0987;InbreedingCoeff=0.6441;MQ=36.74;MQ0=97;MQRankSum=-9.240;QD=8.05;ReadPosRankSum=-8.259;VQSLOD=-0.7178;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:26:41.19:0,41,1101	0/0:12,0:7:18.05:0,18,464	0/0:24,0:3:9.03:0,9,261	0/0:30,0:1:3.01:0,3,99	0/0:22,0:19:39.09:0,39,1061	1/1:14,9:20:26.26:360,26,0	0/1:27,12:32:23.85:499,0,24	0/1:29,0:18:39.08:444,0,39	0/0:35,0:28:40.68:0,41,946	0/0:37,0:28:68.81:0,69,1981	0/0:12,0:12:3.12:0,3,747	1/1:24,10:29:42.31:631,42,0	0/0:24,0:20:28.97:0,29,1329	0/0:38,0:27:68.12:0,68,2038	1/1:20,4:23:3.26:213,3,0	0/0:38,0:30:21.45:0,21,223	0/0:38,0:35:69.22:0,69,2589	0/0:22,0:19:28.07:0,28,348	1/1:19,3:10:6.60:324,7,0	1/1:12,6:13:6.97:119,7,0	0/1:54,4:44:0.33:33,0,0	1/1:7,15:20:7.14:93,7,0	1/1:10,4:11:5.85:76,6,0	1/1:30,11:37:11.39:188,11,0	1/1:7,20:25:4.88:61,5,0	0/0:42,0:25:58.20:0,58,1609	0/0:17,0:13:39.04:0,39,1078	0/0:12,0:10:30:0,30,754
chr10	18998299	.	A	ACAC	2170.02	PASS	AB=0.866;AC=20;AF=0.357;AN=56;BaseQRankSum=8.149;DP=725;FS=6.066;HRun=0;HaplotypeScore=186.0871;InbreedingCoeff=0.4996;MQ=38.65;MQ0=76;MQRankSum=-5.404;QD=6.74;ReadPosRankSum=-5.026;VQSLOD=0.7210;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:25:45.63:0,46,822	0/0:8,0:6:18.06:0,18,316	0/0:31,0:5:12.04:0,12,198	0/0:33,0:2:6.02:0,6,85	0/0:17,0:16:39.13:0,39,710	1/1:19,2:19:0.06:183,0,0	0/1:36,0:28:19.60:407,0,20	0/1:22,4:19:62.90:418,0,63	0/0:26,0:23:45.15:0,45,778	0/0:33,0:28:75.25:0,75,1312	0/0:11,0:11:27.01:0,27,447	0/1:24,6:29:6.79:431,0,7	0/0:22,0:19:47.90:0,48,825	0/0:29,0:23:69.24:0,69,1268	1/1:19,2:20:12.92:153,13,0	0/0:37,0:30:34.80:0,35,264	0/0:36,0:34:70.21:0,70,1530	0/0:22,0:19:21.04:0,21,345	0/1:13,3:11:26.18:261,0,26	1/1:15,1:13:8.86:160,9,0	1/1:44,6:40:5.91:51,6,0	1/1:16,1:17:2.44:16,2,0	1/1:9,2:10:2.71:52,3,0	1/1:34,3:37:8:148,8,0	1/1:24,3:25:2.31:66,2,0	0/0:32,0:22:59.79:0,60,1033	0/0:16,0:14:39.13:0,39,719	0/0:12,0:10:30.02:0,30,478
chr10	18998300	.	T	TAC	1200.74	PASS	AB=1.000;AC=27;AF=0.482;AN=56;BaseQRankSum=10.678;DP=730;FS=0.000;HRun=0;HaplotypeScore=185.8915;InbreedingCoeff=0.8128;MQ=38.94;MQ0=71;MQRankSum=-6.219;QD=3.11;ReadPosRankSum=-6.483;VQSLOD=0.2955;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:25:44.90:0,45,531	0/0:8,0:6:12.03:0,12,140	0/0:31,0:5:11.69:0,12,108	0/0:33,0:2:6.01:0,6,63	0/0:17,0:16:30.09:0,30,361	1/1:24,0:20:10.43:58,10,0	1/1:34,0:28:20.23:99,20,0	1/1:26,0:18:21.96:121,22,0	0/0:25,0:22:43.37:0,43,504	0/0:32,0:28:59.22:0,59,686	0/0:11,0:11:24.07:0,24,287	1/1:31,0:29:24.25:115,24,0	0/0:21,0:18:39.12:0,39,465	0/0:29,0:23:57.16:0,57,678	1/1:23,0:21:5.93:45,6,0	1/1:29,8:30:25.29:365,25,0	0/0:36,0:34:78.02:0,78,926	1/1:11,12:21:21.07:338,21,0	1/1:19,0:13:15.37:72,15,0	1/1:18,0:13:8.98:72,9,0	1/1:52,0:42:2.79:7,3,0	0/1:19,0:19:5.06:14,0,5	1/1:13,0:11:2.37:9,2,0	1/1:40,0:37:11.24:72,11,0	1/1:26,0:24:2.76:23,3,0	0/0:32,0:22:42.11:0,42,495	0/0:17,0:15:30.04:0,30,326	0/0:12,0:10:18.06:0,18,218
chr10	18998779	.	AC	A	2175.20	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.361;DP=631;FS=0.495;HRun=2;HaplotypeScore=79.5892;InbreedingCoeff=0.9840;MQ=88.55;MQ0=0;MQRankSum=-3.896;QD=33.99;ReadPosRankSum=3.319;VQSLOD=3.9434;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,44:45:99:1635,126,0	0/0:13,0:13:39.13:0,39,584	0/0:24,0:24:70.09:0,70,990	0/0:22,0:22:55.61:0,56,761	0/0:15,0:15:42.13:0,42,606	0/0:23,0:23:69.23:0,69,1032	0/0:30,0:30:87.27:0,87,1281	0/0:30,0:30:90.29:0,90,1312	1/1:0,19:19:51.17:662,51,0	0/0:30,0:30:90.30:0,90,1345	0/0:10,0:10:30.10:0,30,447	0/0:20,0:20:57.19:0,57,854	0/0:24,0:24:69.23:0,69,1031	0/0:23,0:23:69.23:0,69,1034	0/0:18,0:18:54.17:0,54,787	0/0:19,0:19:54.18:0,54,808	0/0:26,0:26:78.26:0,78,1165	0/0:13,0:13:39.13:0,39,574	0/0:30,0:30:87.29:0,87,1303	0/0:17,0:17:51.16:0,51,736	0/0:30,0:30:87.22:0,87,1232	0/0:24,0:24:66.22:0,66,985	0/0:22,0:22:63.19:0,63,905	0/0:12,0:12:36.12:0,36,537	0/0:25,0:25:72.24:0,72,1077	0/0:31,0:31:93.29:0,93,1354	0/0:30,0:30:90.27:0,90,1305	0/0:6,0:6:12.04:0,12,180
chr10	18999172	.	ATACAG	A	5617.63	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=15.380;DP=772;FS=16.335;HRun=0;HaplotypeScore=228.1319;InbreedingCoeff=0.9527;MQ=78.14;MQ0=3;MQRankSum=-12.839;QD=15.96;ReadPosRankSum=-1.719;VQSLOD=2.8889;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:24,5:29:30.72:293,31,0	0/0:23,0:23:63.13:0,63,1592	0/0:29,0:27:28.94:0,29,663	0/0:52,0:43:21.08:0,21,562	0/0:31,0:31:60.17:0,60,1432	1/1:13,4:15:19.99:271,20,0	1/1:5,11:16:8.94:116,9,0	1/1:22,3:24:39:466,39,0	1/1:23,16:38:72.03:1088,72,0	0/0:35,0:35:78.21:0,78,1976	0/0:14,0:14:30.09:0,30,736	1/1:17,16:32:51.74:680,52,0	0/0:34,0:34:72.16:0,72,1653	0/0:35,0:35:84.24:0,84,2119	1/1:21,13:31:60.02:974,60,0	0/0:36,0:36:90.28:0,90,2353	0/0:32,0:32:72.23:0,72,1913	0/0:21,0:21:39.12:0,39,1002	1/1:7,11:17:29.98:382,30,0	1/1:8,12:20:22.21:235,22,0	1/1:23,13:33:22.18:243,22,0	1/1:6,14:20:8.86:57,9,0	1/1:8,7:15:2.75:47,3,0	1/1:16,12:28:12.93:162,13,0	1/1:7,15:21:33.11:603,33,0	0/0:36,0:36:75.19:0,75,1777	0/0:29,0:29:84.17:0,84,2022	0/0:10,0:10:24.08:0,24,658
chr10	18999331	.	GTACAA	G	4094.59	PASS	AB=0.748;AC=19;AF=0.339;AN=56;BaseQRankSum=8.144;DP=734;FS=15.664;HRun=0;HaplotypeScore=132.7608;InbreedingCoeff=0.1832;MQ=70.67;MQ0=27;MQRankSum=-7.785;QD=11.60;ReadPosRankSum=-0.263;VQSLOD=1.8421;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:10,18:24:6.02:120,6,0	0/0:11,0:11:33.10:0,33,919	0/0:23,0:11:3.31:0,3,216	0/1:40,0:24:22.65:31,0,23	0/0:32,0:31:72.20:0,72,1849	0/1:5,8:11:52.95:162,0,53	1/1:4,10:12:6.02:120,6,0	1/1:34,2:17:30:336,30,0	0/1:18,31:48:99:202,0,599	0/0:39,0:36:99:0,102,2891	0/0:14,0:14:24.07:0,24,621	0/1:13,20:30:99:658,0,296	0/0:35,0:35:99:0,99,2806	0/0:32,0:32:93.28:0,93,2527	0/1:30,10:33:99:646,0,394	0/0:33,0:33:93.31:0,93,2600	0/0:27,0:27:74.79:0,75,2136	0/0:20,0:20:54.12:0,54,1350	0/1:8,2:6:14.98:44,0,15	0/1:8,14:18:53.93:623,0,54	0/1:18,1:13:12.91:13,0,209	1/1:3,17:18:30.06:561,30,0	1/1:7,2:5:3.01:60,3,0	0/0:14,2:15:5.24:0,5,144	0/1:11,8:15:37.84:518,0,38	0/0:42,0:41:99:0,102,2974	0/0:36,0:35:99:0,108,2864	0/0:21,0:21:57.20:0,57,1656
chr10	18999446	.	G	GTACAA	1172.92	PASS	AB=0.957;AC=10;AF=0.179;AN=56;BaseQRankSum=5.211;DP=856;FS=11.330;HRun=0;HaplotypeScore=157.2033;InbreedingCoeff=-0.0558;MQ=50.62;MQ0=79;MQRankSum=1.490;QD=3.96;ReadPosRankSum=-4.878;VQSLOD=0.0010;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:10,1:9:99:102,0,201	0/0:15,0:15:39.11:0,39,745	1/1:43,0:1:2.80:13,3,0	0/1:60,0:2:13.99:17,0,14	0/0:25,0:19:51.11:0,51,916	0/0:18,0:16:3.11:0,3,716	0/0:14,0:13:33.07:0,33,547	0/0:68,0:33:87.21:0,87,1636	0/1:26,5:29:99:612,0,530	0/0:38,0:37:79.27:0,79,1700	0/0:20,0:18:41.89:0,42,745	0/1:35,0:33:48.87:49,0,1508	0/0:37,0:37:99:0,102,1922	0/0:35,0:35:93.30:0,93,1821	0/1:35,0:35:99:249,0,1060	0/0:37,0:37:99:0,102,1977	0/0:32,0:30:75.24:0,75,1467	0/0:29,0:29:4.67:0,5,1398	0/0:17,0:8:18.04:0,18,265	0/0:26,0:18:45.15:0,45,894	0/1:34,0:30:99:182,0,1129	0/0:41,0:34:79.31:0,79,1690	0/0:16,0:12:29.76:0,30,504	0/1:19,1:21:80.17:80,0,605	0/1:25,0:22:6.69:7,0,1086	0/0:32,0:29:75.18:0,75,1238	0/0:42,0:42:99:0,123,2313	0/0:18,0:18:54.15:0,54,1034
chr10	19000637	.	A	AAT	5162.37	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-11.673;DP=393;FS=5.036;HRun=0;HaplotypeScore=48.7673;InbreedingCoeff=0.9178;MQ=74.94;MQ0=0;MQRankSum=-0.026;QD=29.17;ReadPosRankSum=-0.771;VQSLOD=5.6960;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:16.11:0,16,168	0/0:8,0:8:18.06:0,18,231	0/0:13,0:13:21.43:0,21,234	0/0:6,0:4:5.69:0,6,50	0/0:28,0:28:57.16:0,57,725	1/1:4,15:19:33.11:561,33,0	1/1:2,12:14:21.07:357,21,0	1/1:10,34:44:99:1702,102,0	0/0:10,0:10:19.59:0,20,221	0/0:15,0:15:33.11:0,33,429	0/0:16,0:16:36.12:0,36,468	1/1:2,9:11:15.05:255,15,0	0/0:14,0:14:33.11:0,33,429	0/0:9,0:9:21.06:0,21,259	1/1:3,7:10:15.05:255,15,0	0/0:6,0:6:12.02:0,12,126	0/0:12,0:12:27.01:0,27,289	0/0:22,0:22:57.12:0,57,672	1/1:5,7:12:21.07:350,21,0	1/1:12,7:19:39.09:609,39,0	1/1:1,7:8:15.05:255,15,0	1/1:3,8:11:15.05:255,15,0	1/1:1,2:3:3.01:51,3,0	1/1:3,5:8:6.02:102,6,0	1/1:2,15:17:24.97:410,25,0	0/0:17,0:17:48.16:0,48,624	0/0:26,0:26:78.24:0,78,998	0/0:4,0:4:9.03:0,9,117
chr10	19000651	.	C	CAT	944.43	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-4.035;DP=337;FS=0.000;HRun=0;HaplotypeScore=54.2536;InbreedingCoeff=0.7495;MQ=68.75;MQ0=0;MQRankSum=-0.249;QD=23.03;ReadPosRankSum=1.120;VQSLOD=3.9053;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,1:9:12.01:129,12,0	0/0:5,0:5:15.05:0,15,187	0/0:6,0:6:3.01:0,3,37	0/0:5,0:3:5.03:0,5,66	0/0:20,0:21:50.99:0,51,614	0/0:16,0:16:39.11:0,39,468	0/0:13,0:13:24.02:0,24,285	0/0:37,0:36:84.25:0,84,1026	1/1:6,0:8:5.51:52,6,0	0/0:12,0:12:21.02:0,21,245	0/0:15,0:15:39.12:0,39,488	0/0:8,0:8:18.06:0,18,221	0/0:13,0:13:24.08:0,24,300	0/0:9,0:9:27.09:0,27,337	0/0:9,0:9:18.06:0,18,222	1/1:1,2:3:6.02:99,6,0	0/0:13,0:13:33.10:0,33,412	1/1:2,19:21:16.67:804,17,0	0/0:8,0:8:21.07:0,21,261	0/0:13,0:13:10.12:0,10,212	0/0:8,0:8:18.06:0,18,222	0/0:7,0:7:14.99:0,15,150	0/0:2,0:2:3.01:0,3,37	0/0:6,0:6:9.03:0,9,111	0/0:19,0:19:11.14:0,11,358	0/0:18,0:18:33.10:0,33,413	0/0:28,0:28:69.18:0,69,845	0/0:5,0:5:12.04:0,12,149
chr10	19001048	.	T	TTA	11784.15	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=14.803;DP=595;FS=10.927;HRun=0;HaplotypeScore=90.7139;InbreedingCoeff=0.9947;MQ=94.19;MQ0=0;MQRankSum=-5.912;QD=49.72;ReadPosRankSum=1.340;VQSLOD=5.1203;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,114,1859	0/0:4,0:4:12.04:0,12,196	0/0:30,0:30:52.04:0,52,1164	0/0:31,0:30:72.01:0,72,1022	0/0:23,0:23:66.23:0,66,1066	1/1:0,12:12:30.10:557,30,0	1/1:0,11:11:33.11:632,33,0	1/1:0,27:28:86.99:1491,87,0	0/0:24,0:24:72.25:0,72,1174	0/0:23,0:23:66.21:0,66,1054	0/0:21,0:21:57.17:0,57,901	1/1:0,17:18:45.15:870,45,0	0/0:21,0:21:63.15:0,63,969	0/0:19,0:19:48.16:0,48,782	1/1:1,19:21:57.20:1104,57,0	0/0:25,0:25:75.23:0,75,1173	0/0:22,0:22:66.23:0,66,1071	0/0:27,0:27:81.28:0,81,1317	1/1:0,25:28:84.18:1424,84,0	1/1:0,19:20:57.15:1013,57,0	1/1:0,32:32:84.76:1573,85,0	1/1:0,8:8:24.08:468,24,0	1/1:1,14:15:36.12:638,36,0	1/1:0,22:23:48:896,48,0	1/1:0,20:20:60.20:1118,60,0	0/0:16,0:16:45.14:0,45,689	0/0:27,0:27:81.28:0,81,1319	0/0:7,0:7:21.07:0,21,342
chr10	19002531	.	AAGGGGGAGGAGG	A	1708.60	PASS	AC=4;AF=0.077;AN=52;BaseQRankSum=5.666;DP=301;FS=3.526;HRun=0;HaplotypeScore=91.4432;InbreedingCoeff=0.4551;MQ=60.93;MQ0=13;MQRankSum=-5.914;QD=29.98;ReadPosRankSum=1.566;VQSLOD=2.7945;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:11,17:28:20.90:672,21,0	./.	0/0:25,0:8:6.01:0,6,74	0/0:27,0:15:1.25:0,1,3	./.	0/0:6,0:6:3.01:0,3,138	0/0:12,0:10:21.06:0,21,817	0/0:8,0:8:6.02:0,6,180	1/1:16,13:29:32.69:1152,33,0	0/0:2,0:2:6:0,6,201	0/0:7,0:7:3.48:0,3,122	0/0:7,0:7:18.06:0,18,926	0/0:7,0:6:18.03:0,18,550	0/0:11,0:10:15.05:0,15,572	0/0:14,0:14:18.53:0,19,1006	0/0:15,0:14:33.10:0,33,1230	0/0:12,0:10:6.02:0,6,332	0/0:7,0:7:12.04:0,12,565	0/0:9,0:9:6.02:0,6,143	0/0:4,0:4:6.01:0,6,66	0/0:26,0:25:21.07:0,21,1028	0/0:4,0:4:9.03:0,9,244	0/0:9,0:9:9.03:0,9,406	0/0:7,0:6:9.03:0,9,395	0/0:7,0:7:9.01:0,9,185	0/0:5,0:5:3.01:0,3,177	0/0:4,0:4:3.48:0,3,58	0/0:1,0:1:3.01:0,3,167
chr10	19002726	.	CT	C	1529.58	PASS	AB=0.771;AC=28;AF=0.500;AN=56;BaseQRankSum=5.143;DP=501;FS=23.558;HRun=16;HaplotypeScore=72.3623;InbreedingCoeff=0.2659;MQ=77.16;MQ0=6;MQRankSum=1.375;QD=4.43;ReadPosRankSum=1.978;VQSLOD=0.2609;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:24,2:46:15.38:135,15,0	0/1:3,1:4:9.02:9,0,41	0/0:29,0:17:23.52:0,24,151	0/0:19,0:11:5.36:0,5,29	0/0:15,1:16:15.26:0,15,201	1/1:6,6:13:28.43:155,28,0	0/1:7,4:11:48.05:48,0,68	0/1:28,18:47:10.18:238,0,10	1/1:5,0:14:11.97:35,12,0	0/0:10,0:11:19.95:0,20,127	0/0:13,0:16:31.21:0,31,221	1/1:11,3:14:12.02:79,12,0	0/0:12,0:12:27.80:0,28,211	0/1:11,2:14:9.04:9,0,110	1/1:5,12:18:27.21:155,27,0	1/1:4,2:18:22.46:75,22,0	0/0:35,0:36:61.41:0,61,627	1/1:8,0:22:26.67:77,27,0	0/1:12,8:20:25.63:156,0,26	1/1:7,2:9:13.90:86,14,0	0/1:12,4:16:8.52:71,0,9	0/1:13,6:19:17.06:94,0,17	1/1:7,8:17:17.77:96,18,0	0/1:13,8:22:26.90:171,0,27	0/1:4,0:6:13.15:24,0,13	0/0:7,0:7:2.36:0,2,71	0/1:10,1:11:10.54:11,0,64	0/0:7,0:7:19.48:0,19,145
chr10	19003555	.	AT	A	195.22	PASS	AC=16;AF=0.364;AN=44;BaseQRankSum=1.482;DP=87;FS=12.790;HRun=7;HaplotypeScore=12.6839;InbreedingCoeff=0.5755;MQ=59.86;MQ0=8;MQRankSum=2.105;QD=13.94;ReadPosRankSum=0.322;VQSLOD=0.9833;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:4:3.01:0,3,38	0/0:3,1:3:9.03:0,9,113	0/0:16,0:5:6.02:0,6,76	0/0:7,0:1:0:0,0,0	0/0:3,1:3:9.03:0,9,113	./.	1/1:0,2:2:3.01:31,3,0	./.	0/0:5,0:5:15.05:0,15,189	0/0:4,0:4:12.04:0,12,151	0/0:7,0:7:18.04:0,18,213	./.	0/0:2,0:2:6.02:0,6,75	0/0:3,0:3:6.02:0,6,75	1/1:0,1:1:3.01:31,3,0	0/0:1,0:1:3.01:0,3,38	0/0:8,0:8:21.07:0,21,262	./.	./.	1/1:0,1:1:3.01:31,3,0	1/1:0,3:3:6.01:61,6,0	1/1:0,1:1:3.01:31,3,0	1/1:0,1:1:3.01:31,3,0	1/1:1,2:3:6.01:61,6,0	1/1:0,2:2:6.01:61,6,0	0/0:4,0:4:12.04:0,12,151	0/0:3,0:3:9.03:0,9,110	./.
chr10	19004340	.	G	GGAT	6590.59	PASS	AB=0.946;AC=27;AF=0.482;AN=56;BaseQRankSum=-2.717;DP=676;FS=14.935;HRun=0;HaplotypeScore=79.5150;InbreedingCoeff=0.7473;MQ=46.66;MQ0=33;MQRankSum=-12.238;QD=21.75;ReadPosRankSum=-0.468;VQSLOD=3.2493;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:24:30.07:30,0,513	0/0:18,0:18:48.16:0,48,800	0/0:23,0:13:36.12:0,36,594	0/0:19,0:11:27.09:0,27,445	0/0:26,0:24:51.17:0,51,834	1/1:5,16:17:21.07:474,21,0	1/1:1,11:11:18.06:406,18,0	1/1:6,8:7:18.06:397,18,0	0/0:24,0:24:51.17:0,51,828	0/0:34,1:31:90.21:0,90,1436	0/0:33,0:30:75.26:0,75,1248	1/1:3,14:15:21.07:474,21,0	0/0:34,0:33:72.72:0,73,1198	0/0:26,0:22:42.14:0,42,697	1/1:9,15:23:27.09:595,27,0	0/0:30,0:28:51.13:0,51,818	0/0:45,1:39:10.57:0,11,1168	0/0:28,0:24:39.03:0,39,621	1/1:4,4:4:6.02:136,6,0	1/1:8,22:29:27.09:595,27,0	1/1:4,1:3:3.01:68,3,0	1/1:7,21:24:42.14:942,42,0	1/1:2,22:22:36.12:812,36,0	1/1:5,12:15:21.07:465,21,0	1/1:1,28:28:48.16:1083,48,0	0/1:25,1:24:7.57:8,0,889	0/0:30,0:28:57.08:0,57,841	0/1:18,0:19:99:107,0,648
chr10	19004816	.	T	TC	4880.71	PASS	AB=0.762;AC=23;AF=0.411;AN=56;BaseQRankSum=12.830;DP=533;FS=0.831;HRun=0;HaplotypeScore=73.8500;InbreedingCoeff=0.9134;MQ=48.95;MQ0=12;MQRankSum=-4.656;QD=25.16;ReadPosRankSum=-2.915;VQSLOD=4.7460;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,132,1827	0/0:13,0:13:27.09:0,27,377	0/0:20,0:5:15.02:0,15,185	0/0:11,0:4:9.02:0,9,103	0/0:22,0:22:63.16:0,63,857	1/1:1,18:18:33.06:468,33,0	1/1:3,12:13:27.09:412,27,0	0/1:11,5:10:84.61:85,0,143	0/0:18,0:18:54.16:0,54,721	0/0:23,0:23:66.22:0,66,923	0/0:20,0:20:54.03:0,54,669	1/1:0,10:10:21.07:313,21,0	0/0:14,0:14:42.11:0,42,560	0/0:24,0:23:66.21:0,66,905	1/1:0,19:17:24.08:366,24,0	0/0:14,0:14:42.10:0,42,565	0/0:29,2:31:73.67:0,74,1177	0/0:25,0:25:72.19:0,72,953	1/1:4,8:9:21.07:321,21,0	1/1:2,24:24:51.17:767,51,0	1/1:0,13:13:36.01:486,36,0	1/1:1,22:22:36.03:520,36,0	1/1:2,15:13:24.08:365,24,0	1/1:1,14:12:27.09:412,27,0	1/1:0,9:8:24.08:366,24,0	0/0:24,0:23:69.22:0,69,949	0/0:20,0:20:60.13:0,60,796	0/0:15,0:15:45.15:0,45,627
chr10	19004880	.	C	CTTTTT	6368.20	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-3.657;DP=427;FS=0.979;HRun=8;HaplotypeScore=83.9251;InbreedingCoeff=0.9321;MQ=54.42;MQ0=10;MQRankSum=-9.645;QD=42.45;ReadPosRankSum=-2.736;VQSLOD=2.5363;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:51.12:0,51,854	0/0:13,0:13:39.13:0,39,658	0/0:18,0:7:12:0,12,185	0/0:18,0:8:7.71:0,8,179	0/0:34,0:35:87.23:0,87,1468	1/1:9,6:15:21.07:597,21,0	1/1:5,4:10:18.06:449,18,0	1/1:17,6:21:30.07:667,30,0	0/0:7,0:7:21.07:0,21,345	0/0:27,0:27:72.21:0,72,1198	0/0:21,0:21:54.15:0,54,922	1/1:3,5:10:18.06:489,18,0	0/0:17,0:17:36.04:0,36,589	0/0:17,0:17:42.10:0,42,719	1/1:5,10:16:33.11:883,33,0	0/0:7,0:7:18.04:0,18,308	0/0:17,0:17:45.14:0,45,727	0/0:15,0:16:41.13:0,41,638	1/1:7,8:11:27.07:612,27,0	1/1:9,6:15:27.08:634,27,0	1/1:1,1:3:6.02:137,6,0	1/1:2,11:12:36.12:983,36,0	1/1:7,3:9:15.05:377,15,0	1/1:1,4:4:9.03:260,9,0	1/1:2,4:5:12:280,12,0	0/0:20,0:20:57.15:0,57,927	0/0:16,0:16:5.30:0,5,534	0/0:6,0:6:15.03:0,15,257
chr10	19005019	.	GC	G	174.64	PASS	AC=8;AF=0.200;AN=40;BaseQRankSum=4.507;DP=304;FS=5.570;HRun=3;HaplotypeScore=36.0307;InbreedingCoeff=0.8356;MQ=68.98;MQ0=7;MQRankSum=-4.539;QD=12.47;ReadPosRankSum=-1.657;VQSLOD=1.1202;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:72.24:0,72,1037	0/0:9,0:9:24.08:0,24,344	0/0:13,0:12:36.12:0,36,510	0/0:18,0:16:39.04:0,39,530	0/0:24,0:24:69.23:0,69,993	1/1:2,2:4:6.02:74,6,0	./.	1/1:2,2:1:3.01:37,3,0	0/0:12,0:12:36.12:0,36,518	0/0:23,0:23:69.23:0,69,993	0/0:12,0:12:33.11:0,33,474	./.	0/0:17,0:17:48.16:0,48,691	0/0:16,0:16:48.16:0,48,691	./.	0/0:21,0:21:60.20:0,60,864	0/0:22,0:21:63.21:0,63,902	0/0:16,0:16:45.15:0,45,644	1/1:1,4:4:12.04:149,12,0	1/1:0,1:1:3.01:37,3,0	./.	./.	./.	./.	./.	0/0:30,0:29:87.29:0,87,1252	0/0:15,0:15:42.14:0,42,605	0/0:5,0:5:15.01:0,15,193
chr10	19006358	.	TGG	T	7285.66	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=4.810;DP=527;FS=0.000;HRun=9;HaplotypeScore=77.9156;InbreedingCoeff=0.9805;MQ=91.45;MQ0=0;MQRankSum=-3.331;QD=28.80;ReadPosRankSum=1.497;VQSLOD=4.9509;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:35:70:0,70,683	0/0:3,0:3:6.02:0,6,98	0/0:23,0:22:51.02:0,51,731	0/0:22,0:23:41.52:0,42,571	0/0:15,0:16:35.47:0,35,515	1/1:1,22:23:60.18:699,60,0	1/1:3,20:23:54.15:629,54,0	1/1:3,18:21:54.15:629,54,0	0/0:3,0:15:27.05:0,27,279	0/0:19,0:19:48.16:0,48,763	0/0:8,0:8:24.08:0,24,394	1/1:1,17:18:42.12:489,42,0	0/0:16,0:16:45.15:0,45,734	0/0:17,0:17:45.14:0,45,714	1/1:2,19:21:51.15:594,51,0	0/0:4,0:15:27.04:0,27,276	0/0:23,0:23:66.23:0,66,1081	0/0:2,0:15:36.06:0,36,358	1/1:3,13:16:39.11:455,39,0	1/1:3,10:13:30.08:349,30,0	1/1:3,31:34:90.26:1047,90,0	1/1:6,15:21:54.15:628,54,0	1/1:3,14:17:39.06:438,39,0	1/1:1,21:22:51.15:594,51,0	1/1:2,22:24:63.18:733,63,0	0/0:23,0:23:54.17:0,54,842	0/0:16,0:16:48.16:0,48,782	0/0:6,0:6:12.04:0,12,186
chr10	19006366	.	GGT	G	1828.25	PASS	AB=0.961;AC=19;AF=0.339;AN=56;BaseQRankSum=12.696;DP=516;FS=1.927;HRun=0;HaplotypeScore=94.8572;InbreedingCoeff=0.5641;MQ=90.79;MQ0=0;MQRankSum=-1.278;QD=7.31;ReadPosRankSum=4.189;VQSLOD=3.3171;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:81.63:0,82,928	0/0:3,0:3:9.03:0,9,155	0/0:21,0:20:45.11:0,45,857	0/0:24,0:23:56.65:0,57,730	0/0:15,0:15:38.97:0,39,585	1/1:22,1:23:52.62:251,53,0	0/1:25,0:25:67.31:116,0,67	0/1:21,0:21:31.78:95,0,32	0/0:18,0:18:39.05:0,39,423	0/0:19,0:19:51.15:0,51,846	0/0:9,0:9:27.08:0,27,471	1/1:17,0:17:36.07:162,36,0	0/0:16,0:16:48.15:0,48,851	0/0:15,0:15:45.13:0,45,794	1/1:20,0:20:22.76:169,23,0	0/0:12,0:12:27.07:0,27,311	0/0:26,0:26:75.20:0,75,1279	0/0:15,0:15:39.06:0,39,432	1/1:14,0:14:5.28:80,5,0	0/1:12,1:13:19.83:103,0,20	1/1:33,1:34:37.59:311,38,0	0/1:18,3:21:20.38:222,0,20	1/1:15,0:15:8.53:144,9,0	0/1:23,0:23:12.30:119,0,12	1/1:23,1:24:32.68:254,33,0	0/0:18,0:18:51.16:0,51,916	0/0:16,0:16:48.16:0,48,892	0/0:4,0:4:12:0,12,183
chr10	19006738	.	CCAAA	C	10999.41	PASS	AC=24;AF=0.444;AN=54;BaseQRankSum=10.106;DP=719;FS=0.311;HRun=0;HaplotypeScore=135.1250;InbreedingCoeff=0.9982;MQ=78.16;MQ0=0;MQRankSum=-4.044;QD=36.06;ReadPosRankSum=2.404;VQSLOD=4.5739;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:63,0:63:99:0,169,3115	0/0:13,0:13:36.12:0,36,907	0/0:20,0:20:54.19:0,54,1288	0/0:29,0:29:40.09:0,40,1030	0/0:26,0:26:63.22:0,63,1592	1/1:2,10:12:21.07:363,21,0	1/1:7,18:25:39.13:674,39,0	1/1:6,24:30:72.22:1186,72,0	0/0:30,0:30:78.27:0,78,1456	0/0:32,0:32:78.26:0,78,1918	0/0:15,0:15:39.13:0,39,979	1/1:3,30:33:72.25:1243,72,0	0/0:29,0:29:72.25:0,72,1820	0/0:18,0:18:42.14:0,42,1033	1/1:1,27:28:69.24:1192,69,0	0/0:35,0:35:99:0,99,2464	0/0:35,0:35:93.32:0,93,2352	0/0:25,0:25:69.24:0,69,1745	1/1:5,13:18:36.05:536,36,0	1/1:4,22:26:60.21:1037,60,0	1/1:3,38:41:81.28:1400,81,0	1/1:3,25:28:69.24:1191,69,0	1/1:4,7:11:18.06:311,18,0	1/1:5,25:30:63.69:1089,64,0	1/1:4,19:23:45.15:778,45,0	0/0:21,0:21:48.16:0,48,1192	0/0:23,0:23:69.24:0,69,1693	./.
chr10	19007269	.	C	CA	1243.93	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.793;DP=701;FS=0.635;HRun=0;HaplotypeScore=84.5567;InbreedingCoeff=0.9918;MQ=75.00;MQ0=0;MQRankSum=-9.077;QD=34.55;ReadPosRankSum=2.404;VQSLOD=3.3483;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,141,1870	0/0:16,0:16:47.99:0,48,638	0/0:13,0:13:33.07:0,33,393	0/0:25,0:25:69.14:0,69,842	0/0:29,0:29:81.27:0,81,1132	0/0:16,0:16:45.15:0,45,629	0/0:30,0:30:90.27:0,90,1225	0/0:30,0:30:87.29:0,87,1203	0/0:26,0:26:78.26:0,78,1091	0/0:32,0:32:93.31:0,93,1288	0/0:21,0:21:60.20:0,60,839	0/0:17,0:17:51.17:0,51,713	0/0:19,0:19:57.18:0,57,781	0/0:34,0:34:96.30:0,96,1309	0/0:25,0:25:72.24:0,72,1007	1/1:3,16:19:15.20:634,15,0	0/0:37,0:37:99:0,111,1513	1/1:2,15:17:51.15:729,51,0	0/0:14,0:14:42.13:0,42,556	0/0:27,0:27:81.27:0,81,1133	0/0:50,0:50:99:0,150,2080	0/0:19,0:19:51.17:0,51,713	0/0:29,0:29:87.29:0,87,1216	0/0:19,0:19:57.17:0,57,779	0/0:27,0:27:81.27:0,81,1132	0/0:22,0:22:63.21:0,63,881	0/0:29,0:29:87.29:0,87,1216	0/0:11,0:11:33.11:0,33,461
chr10	19007272	.	CACAAAGAGG	C	2684.34	PASS	AB=0.515;AC=3;AF=0.054;AN=56;BaseQRankSum=9.444;DP=696;FS=1.424;HRun=0;HaplotypeScore=197.7821;InbreedingCoeff=0.6476;MQ=75.52;MQ0=0;MQRankSum=-8.889;QD=83.89;ReadPosRankSum=3.203;VQSLOD=4.0412;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,138,6891	0/0:16,0:16:45.15:0,45,2120	0/0:16,0:16:48.16:0,48,1934	0/0:24,0:24:58.11:0,58,2350	0/0:31,0:31:90.31:0,90,4336	0/0:17,0:17:51.18:0,51,2506	0/0:29,0:29:87.30:0,87,4168	0/0:30,0:30:90.31:0,90,4240	0/0:26,0:26:78.27:0,78,3800	0/0:31,0:31:93.32:0,93,4622	0/0:21,0:21:63.22:0,63,3182	0/0:17,0:17:51.18:0,51,2542	0/0:18,0:18:54.19:0,54,2563	0/0:33,0:33:93.32:0,93,4526	0/0:27,0:27:81.28:0,81,3884	0/1:1,16:17:99:1375,0,101	0/0:36,0:36:99:0,108,5282	1/1:0,15:15:45.15:1415,45,0	0/0:13,0:13:39.10:0,39,1806	0/0:27,0:27:81.28:0,81,4102	0/0:48,0:48:99:0,144,7024	0/0:19,0:19:57.20:0,57,2749	0/0:30,0:30:90.30:0,90,4277	0/0:19,0:19:57.20:0,57,2782	0/0:27,0:27:78.27:0,78,3891	0/0:21,0:21:57.20:0,57,2792	0/0:29,0:29:87.30:0,87,4251	0/0:11,0:11:33.11:0,33,1671
chr10	19009881	.	TTCTCTCTCTC	T	2074.78	PASS	AB=0.955;AC=22;AF=0.550;AN=40;BaseQRankSum=-1.316;DP=491;FS=6.180;HRun=0;HaplotypeScore=198.3944;InbreedingCoeff=0.0926;MQ=68.22;MQ0=9;MQRankSum=2.026;QD=8.17;ReadPosRankSum=1.717;VQSLOD=2.2493;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	./.	0/1:25,0:25:38.09:38,0,133	./.	0/0:30,0:30:6.02:0,6,83	1/1:7,0:7:3.01:50,3,0	1/1:21,0:23:13.72:482,14,0	1/1:9,0:9:15.05:387,15,0	0/1:17,0:17:16.95:17,0,94	0/1:11,0:13:10.49:124,0,10	./.	0/1:21,0:21:7.04:7,0,64	./.	0/1:17,7:22:53.97:80,0,54	1/1:6,0:6:3.01:71,3,0	0/0:18,0:18:2.97:0,3,20	0/1:26,0:26:0.13:0,0,281	0/0:17,0:16:2.97:0,3,20	0/0:26,0:26:12.12:0,12,205	0/1:14,0:14:7.85:8,0,104	0/0:21,0:21:5.87:0,6,91	0/1:19,0:19:3.44:3,0,26	1/1:12,7:20:23.07:629,23,0	1/1:20,0:21:12.01:225,12,0	1/1:8,0:7:3.01:88,3,0
chr10	19009928	.	TCACACACA	T	2340.26	PASS	AB=0.974;AC=22;AF=0.611;AN=36;BaseQRankSum=-4.163;DP=479;FS=33.177;HRun=0;HaplotypeScore=145.3880;InbreedingCoeff=0.4213;MQ=39.95;MQ0=18;MQRankSum=1.807;QD=10.26;ReadPosRankSum=-1.248;VQSLOD=1.3002;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:24:5.54:81,6,0	1/1:9,1:9:9.03:223,9,0	./.	./.	1/1:17,1:18:6.02:145,6,0	0/0:22,0:20:3.01:0,3,37	0/0:17,0:14:0.47:0,0,1	./.	0/0:12,0:10:3.75:0,4,47	0/1:17,1:18:68.55:344,0,69	1/1:13,2:22:2.71:69,3,0	./.	1/1:14,0:14:14.69:272,15,0	1/1:22,0:20:10.32:112,10,0	./.	0/0:18,0:17:0:0,0,0	1/1:23,0:22:17.63:444,18,0	0/0:7,0:7:3.01:0,3,82	./.	0/1:25,0:24:0:0,0,0	./.	./.	./.	0/0:16,0:14:3.48:0,3,90	./.	1/1:20,0:21:17.85:411,18,0	1/1:7,8:15:6.17:142,6,0	1/1:11,0:10:6.98:212,7,0
chr10	19010117	.	CA	C	8851.82	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-13.029;DP=769;FS=7.498;HRun=3;HaplotypeScore=109.2373;InbreedingCoeff=0.9913;MQ=82.43;MQ0=0;MQRankSum=0.161;QD=33.15;ReadPosRankSum=3.295;VQSLOD=4.4969;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,34:34:87.27:1076,87,0	1/1:0,8:8:21.07:260,21,0	0/0:17,0:17:42.14:0,42,601	0/0:27,0:27:65.91:0,66,950	1/1:1,20:21:57.18:707,57,0	0/0:30,0:30:84.25:0,84,1170	0/0:31,0:31:93.30:0,93,1318	0/0:39,0:39:99:0,114,1578	1/1:0,16:16:45.14:558,45,0	1/1:0,25:25:75.23:917,75,0	1/1:0,12:12:33.10:409,33,0	0/0:21,0:21:60.20:0,60,864	1/1:2,21:23:57.18:707,57,0	1/1:1,25:26:72.23:890,72,0	0/0:33,0:33:96.32:0,96,1367	0/0:27,0:27:78.26:0,78,1121	1/1:0,36:36:84.26:1041,84,0	0/0:26,0:26:78.19:0,78,1077	0/0:28,0:28:84.27:0,84,1193	0/0:37,0:37:99:0,105,1458	0/0:48,0:48:99:0,144,2071	0/0:42,0:42:99:0,123,1750	0/0:22,0:22:57.19:0,57,819	0/0:38,0:38:99:0,111,1575	0/0:36,0:35:99:0,105,1503	1/1:1,30:31:90.26:1099,90,0	1/1:0,31:31:87.27:1078,87,0	1/1:0,4:4:9.03:112,9,0
chr10	19011051	.	A	ACTATCTAT	9304.62	PASS	AB=0.826;AC=48;AF=0.923;AN=52;BaseQRankSum=-0.574;DP=702;FS=4.966;HRun=0;HaplotypeScore=204.5910;InbreedingCoeff=0.0822;MQ=65.52;MQ0=2;MQRankSum=-0.057;QD=14.08;ReadPosRankSum=-0.566;VQSLOD=3.8039;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:9,0:21:17.94:147,0,18	1/1:10,1:21:9.01:264,9,0	./.	0/1:32,0:20:0:0,0,0	0/1:14,0:30:93.74:208,0,94	1/1:32,0:32:28.81:100,29,0	./.	1/1:33,0:33:23.81:187,24,0	1/1:15,0:26:29.93:243,30,0	1/1:22,15:44:67.09:1895,67,0	1/1:10,0:15:2.04:6,2,0	1/1:27,0:27:27.30:93,27,0	1/1:13,8:22:12.04:474,12,0	1/1:19,0:19:6.02:119,6,0	1/1:26,0:26:15.05:537,15,0	1/1:24,0:24:32.95:1187,33,0	1/1:16,6:23:12.04:408,12,0	1/1:15,0:15:12.04:335,12,0	1/1:20,0:20:22.23:115,22,0	1/1:26,0:26:22.16:81,22,0	1/1:20,0:20:9.61:33,10,0	1/1:24,0:24:12.04:430,12,0	1/1:34,0:34:28.55:106,29,0	0/1:23,0:23:19.65:20,0,61	1/1:27,0:27:24.42:78,24,0	1/1:22,9:33:42.14:1134,42,0	1/1:18,8:28:21.07:777,21,0	1/1:12,3:15:12.04:329,12,0
chr10	19011092	.	C	CTATT	10960.97	PASS	AB=0.923;AC=35;AF=0.625;AN=56;BaseQRankSum=0.580;DP=748;FS=3.521;HRun=0;HaplotypeScore=150.8939;InbreedingCoeff=0.0441;MQ=57.48;MQ0=7;MQRankSum=-0.631;QD=16.26;ReadPosRankSum=3.353;VQSLOD=4.7607;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:28:99:269,0,185	0/1:18,0:18:4.31:4,0,164	0/0:14,0:8:14.13:0,14,148	0/0:15,0:6:14.95:0,15,137	0/1:30,0:30:99:387,0,293	1/1:3,27:30:36.12:968,36,0	1/1:0,15:16:2.97:20,3,0	1/1:46,0:46:99:1086,129,0	0/1:32,0:32:99:366,0,350	0/1:45,0:43:99:326,0,466	0/0:21,0:21:7.10:0,7,134	1/1:0,24:25:36.12:968,36,0	0/1:25,0:24:81.29:81,0,288	0/0:24,0:24:19.12:0,19,321	0/1:3,1:20:4.56:272,0,5	1/1:2,0:33:13.16:611,13,0	0/1:24,0:24:5.82:6,0,170	0/1:14,0:15:33.12:244,0,33	1/1:3,21:23:69.07:1140,69,0	1/1:2,24:27:65.74:995,66,0	1/1:0,16:17:12.51:324,13,0	1/1:0,0:30:20.44:470,20,0	1/1:1,36:39:42.93:1009,43,0	0/1:6,17:27:1.88:331,0,2	1/1:2,36:39:33.11:888,33,0	0/1:41,0:41:68.42:68,0,654	0/1:31,0:31:72.82:73,0,301	0/1:9,0:9:51.97:52,0,96
chr10	19011273	.	T	TTCTCTC	2502.02	PASS	AB=0.986;AC=43;AF=0.796;AN=54;BaseQRankSum=-4.593;DP=614;FS=2.028;HRun=0;HaplotypeScore=171.4264;InbreedingCoeff=0.2239;MQ=67.82;MQ0=9;MQRankSum=3.669;QD=4.96;ReadPosRankSum=1.548;VQSLOD=2.8913;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:17:11.95:107,12,0	1/1:10,0:10:5.75:62,6,0	./.	0/0:39,0:21:0:0,0,0	1/1:21,0:21:15.02:226,15,0	1/1:25,0:25:20.22:172,20,0	0/1:19,0:19:5.80:12,0,6	1/1:40,0:40:10.75:53,11,0	0/1:12,0:16:65.70:128,0,66	1/1:30,0:29:25.78:251,26,0	0/0:15,0:15:0.64:0,1,2	1/1:27,0:27:8.49:66,8,0	1/1:18,8:28:12:144,12,0	1/1:21,1:22:11.79:107,12,0	1/1:20,0:20:17.29:148,17,0	1/1:19,0:18:8.99:75,9,0	0/1:21,0:22:0.24:195,0,0	1/1:14,0:13:8.96:70,9,0	1/1:30,0:30:16.23:119,16,0	0/0:13,0:12:0.39:0,0,0	1/1:27,0:28:6.86:112,7,0	0/0:8,0:8:0.88:0,1,2	1/1:17,0:16:8.98:72,9,0	1/1:26,0:26:5.13:49,5,0	1/1:18,0:18:5.99:50,6,0	1/1:26,0:26:24.98:211,25,0	1/1:14,6:22:6.02:154,6,0	1/1:6,0:6:2.90:16,3,0
chr10	19011327	.	CTT	C	2886.23	PASS	AB=0.969;AC=26;AF=0.464;AN=56;BaseQRankSum=10.631;DP=476;FS=20.150;HRun=3;HaplotypeScore=102.2928;InbreedingCoeff=0.8163;MQ=61.85;MQ0=11;MQRankSum=1.654;QD=14.95;ReadPosRankSum=2.090;VQSLOD=-0.1326;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:14.06:0,14,777	0/0:11,0:11:29.60:0,30,498	0/0:24,0:16:39.79:0,40,611	0/1:14,1:11:7.53:8,0,213	0/0:22,0:22:62.30:0,62,1022	1/1:17,0:16:38.77:303,39,0	1/1:24,0:24:62.81:511,63,0	1/1:13,0:12:32.88:269,33,0	0/0:26,0:26:42.93:0,43,984	0/0:22,0:22:65.22:0,65,968	0/0:13,0:13:32.96:0,33,436	1/1:7,0:8:17.55:116,18,0	0/0:34,0:32:52.10:0,52,934	0/0:26,0:26:15.28:0,15,869	1/1:10,0:10:23.43:195,23,0	0/1:19,0:18:10.01:312,0,10	0/0:21,0:21:45.89:0,46,814	1/1:12,0:12:33.72:254,34,0	1/1:7,0:6:15.84:125,16,0	1/1:8,0:8:11.92:100,12,0	1/1:13,0:12:23.90:198,24,0	1/1:8,0:8:8.99:75,9,0	0/0:1,12:13:0.42:0,1,0	1/1:28,0:27:50.38:412,50,0	1/1:11,0:11:26.97:225,27,0	0/0:19,0:19:48.38:0,48,695	0/0:26,0:26:57.45:0,57,877	0/0:2,0:2:6.02:0,6,114
chr10	19014182	.	C	CCACGGGAG	4785.79	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=-10.307;DP=703;FS=3.069;HRun=0;HaplotypeScore=221.8105;InbreedingCoeff=-0.0904;MQ=88.21;MQ0=0;MQRankSum=-10.341;QD=11.13;ReadPosRankSum=-9.062;VQSLOD=1.1748;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:18,23:41:81.13:2381,81,0	0/0:10,0:10:29.99:0,30,484	0/0:33,0:33:79.79:0,80,1628	0/0:30,0:30:77.97:0,78,1530	0/0:17,0:17:45.14:0,45,801	0/0:35,0:35:30.28:0,30,1644	0/0:19,0:19:1.69:0,2,808	0/1:29,0:29:67.01:67,0,940	1/1:8,15:24:63.55:1997,64,0	0/0:16,0:16:17.15:0,17,671	0/1:14,0:14:16.36:16,0,547	0/1:32,0:32:12.99:13,0,1279	0/1:25,0:25:24.76:25,0,1043	0/1:24,0:24:90.04:90,0,726	0/1:33,0:33:31.91:32,0,1342	0/1:30,0:30:12.72:13,0,1310	0/0:29,0:29:56.13:0,56,1392	0/0:20,0:20:19.96:0,20,846	0/1:26,0:26:34.01:34,0,874	0/1:22,0:22:58.78:59,0,857	0/1:40,0:40:31.67:32,0,1618	0/0:19,0:19:21.18:0,21,909	0/0:23,0:23:35.72:0,36,1072	0/1:33,0:33:1.71:2,0,1419	0/0:14,0:14:13.11:0,13,652	0/1:28,0:28:15.79:16,0,1117	0/1:29,0:29:9.73:10,0,1259	0/0:8,0:8:24.08:0,24,454
chr10	19014184	.	T	TC	697.16	PASS	AB=0.645;AC=2;AF=0.036;AN=56;BaseQRankSum=9.799;DP=718;FS=9.237;HRun=2;HaplotypeScore=143.9141;InbreedingCoeff=-0.0371;MQ=87.95;MQ0=0;MQRankSum=-10.052;QD=9.55;ReadPosRankSum=0.149;VQSLOD=0.6801;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:24,23:47:99:416,0,234	0/0:10,0:10:30.09:0,30,372	0/0:34,0:34:83.33:0,83,1067	0/0:30,0:30:75.20:0,75,922	0/0:16,0:16:45.12:0,45,539	0/0:35,0:35:99:0,105,1266	0/0:19,0:19:54.17:0,54,669	0/0:33,0:33:75.18:0,75,910	0/1:10,16:26:99:370,0,144	0/0:16,0:16:48.11:0,48,571	0/0:14,0:14:42.08:0,42,504	0/0:31,0:31:87.21:0,87,1058	0/0:25,0:25:72.21:0,72,876	0/0:22,0:22:63.13:0,63,735	0/0:33,0:33:96.30:0,96,1184	0/0:32,0:32:90.21:0,90,1081	0/0:31,0:31:87.25:0,87,1063	0/0:20,0:20:54.17:0,54,669	0/0:25,0:25:69.19:0,69,828	0/0:23,0:23:66.16:0,66,789	0/0:40,0:40:99:0,117,1364	0/0:19,0:19:56.75:0,57,657	0/0:24,0:24:67.41:0,67,803	0/0:33,0:33:96.29:0,96,1177	0/0:14,0:14:42.12:0,42,510	0/0:29,0:29:84.25:0,84,1024	0/0:29,0:29:87.18:0,87,1043	0/0:8,0:8:24.08:0,24,297
chr10	19015864	.	GAGAA	G	4653.54	PASS	AB=1.000;AC=31;AF=0.554;AN=56;BaseQRankSum=-11.007;DP=594;FS=2.494;HRun=0;HaplotypeScore=118.3579;InbreedingCoeff=-0.3664;MQ=70.40;MQ0=11;MQRankSum=-2.509;QD=9.16;ReadPosRankSum=-0.881;VQSLOD=4.1477;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:33:52.35:326,0,52	1/1:6,0:6:11.50:99,11,0	0/0:36,0:14:28.57:0,29,268	0/0:48,0:26:40.57:0,41,406	1/1:12,0:12:25.19:201,25,0	1/1:16,0:16:14.54:122,15,0	0/1:23,0:23:65:206,0,65	1/1:22,0:22:27.70:329,28,0	0/1:25,0:25:51.04:227,0,51	0/1:24,0:24:99:300,0,116	1/1:16,0:16:26.84:214,27,0	0/1:17,0:17:61.13:143,0,61	0/1:24,0:23:99:112,0,251	0/1:21,0:21:2.43:231,0,2	1/1:2,24:26:12.04:186,12,0	0/1:27,0:27:99:211,0,256	0/1:13,0:13:69.11:162,0,69	0/1:21,0:20:99:140,0,226	0/1:16,0:16:53.33:167,0,53	0/1:21,0:21:33.23:301,0,33	0/1:25,0:25:99:171,0,137	0/1:11,0:11:46.16:79,0,46	0/1:13,0:13:32.16:166,0,32	0/1:24,0:24:29.97:30,0,328	0/1:23,0:23:24.73:106,0,25	0/1:25,0:25:2.21:283,0,2	0/1:24,0:24:99:143,0,168	0/0:2,0:1:3.01:0,3,35
chr10	19018609	.	T	TAGA	32437.85	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-10.071;DP=824;FS=3.346;HRun=0;HaplotypeScore=110.9908;InbreedingCoeff=0.9910;MQ=84.91;MQ0=0;MQRankSum=-11.692;QD=42.40;ReadPosRankSum=7.221;VQSLOD=5.5780;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,36:47:85.49:1750,85,0	1/1:2,11:13:30.10:640,30,0	0/0:32,0:32:81.27:0,81,1218	0/0:27,0:27:69.23:0,69,1025	1/1:7,18:26:39.09:788,39,0	1/1:7,16:22:33.11:704,33,0	1/1:5,21:26:45.15:960,45,0	1/1:8,29:39:99:2114,108,0	1/1:6,30:38:69.24:1472,69,0	1/1:3,23:28:75.22:1514,75,0	1/1:2,18:20:42.14:895,42,0	1/1:11,32:43:74.86:1600,75,0	1/1:5,36:42:99:2063,99,0	1/1:3,20:23:48.16:1025,48,0	1/1:5,42:50:99:2113,99,0	1/1:5,31:36:78.27:1665,78,0	1/1:5,12:17:29.78:596,30,0	1/1:1,16:18:45.15:960,45,0	1/1:2,17:19:54.18:1113,54,0	1/1:8,27:35:60.08:1148,60,0	1/1:6,33:41:76.50:1603,77,0	1/1:4,22:26:51.05:957,51,0	1/1:7,15:22:34:706,34,0	1/1:3,20:24:47.65:970,48,0	1/1:5,23:28:60.21:1279,60,0	1/1:0,28:29:84.25:1692,84,0	1/1:10,35:47:84.24:1792,84,0	1/1:0,5:5:15.05:320,15,0
chr10	19019632	.	CTCTGTG	C	3181.93	PASS	AB=1.000;AC=20;AF=0.357;AN=56;BaseQRankSum=1.391;DP=518;FS=11.357;HRun=0;HaplotypeScore=110.4517;InbreedingCoeff=0.4484;MQ=48.76;MQ0=38;MQRankSum=3.435;QD=12.53;ReadPosRankSum=1.636;VQSLOD=2.0756;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:22:6.26:0,6,491	1/1:8,0:7:4.86:49,5,0	0/0:8,0:3:3.56:0,4,74	0/0:7,0:3:8.99:0,9,100	1/1:12,0:11:20.70:297,21,0	0/0:17,0:16:27.37:0,27,443	0/0:27,0:25:26.13:0,26,403	0/0:32,0:31:57.88:0,58,866	0/0:10,0:10:18.06:0,18,289	1/1:5,12:16:18.69:478,19,0	1/1:12,0:11:3.01:35,3,0	0/0:23,0:20:46.65:0,47,749	0/1:31,0:31:34.29:34,0,107	0/1:18,0:16:39.87:242,0,40	0/0:26,0:26:17.35:0,17,769	0/1:18,0:17:99:167,0,127	1/1:23,0:21:36.55:493,37,0	0/1:27,0:24:47.38:125,0,47	0/0:13,0:11:26.77:0,27,329	0/0:15,0:15:17.94:0,18,281	0/0:25,0:23:39.13:0,39,665	0/0:10,0:8:21.07:0,21,340	0/0:11,0:10:12.04:0,12,264	0/1:25,0:23:3.91:4,0,359	0/0:15,0:14:30.10:0,30,523	1/1:34,0:29:57.60:818,58,0	0/1:16,0:16:55.01:357,0,55	1/1:13,0:9:17.03:272,17,0
chr10	19019634	.	CTGTG	C	3453.01	PASS	AB=0.869;AC=21;AF=0.375;AN=56;BaseQRankSum=2.066;DP=527;FS=5.547;HRun=0;HaplotypeScore=101.4019;InbreedingCoeff=0.7127;MQ=50.13;MQ0=37;MQRankSum=2.745;QD=15.08;ReadPosRankSum=1.635;VQSLOD=3.1288;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:23:27.09:0,27,496	1/1:9,0:8:4.44:49,4,0	0/0:10,0:4:6.54:0,7,96	0/0:7,0:3:8.99:0,9,100	1/1:15,0:14:26.74:402,27,0	0/0:16,0:15:27.48:0,27,400	0/0:26,0:24:22.54:0,23,381	0/0:34,0:34:66.91:0,67,1020	0/0:12,0:12:21.07:0,21,339	1/1:17,0:16:29.39:465,29,0	1/1:2,10:11:3.01:35,3,0	0/0:23,0:20:47.14:0,47,722	0/1:28,0:28:3.46:31,0,3	1/1:18,0:16:24.07:329,24,0	0/0:26,0:26:44.63:0,45,706	0/1:17,0:17:30.20:150,0,30	1/1:21,0:20:33.05:470,33,0	0/1:13,0:24:27.91:85,0,28	0/0:15,0:13:26.88:0,27,359	0/0:15,0:15:17.93:0,18,281	0/0:26,0:24:42.13:0,42,652	0/0:10,0:8:21.07:0,21,340	0/0:12,0:11:15.05:0,15,268	0/0:26,0:24:24.26:0,24,395	0/0:14,0:13:30.10:0,30,500	1/1:15,19:29:51.17:747,51,0	1/1:17,0:17:10.02:415,10,0	1/1:13,0:9:18.06:274,18,0
chr10	19019658	.	GTGTA	G	1372.34	PASS	AB=0.959;AC=11;AF=0.196;AN=56;BaseQRankSum=11.627;DP=601;FS=4.659;HRun=0;HaplotypeScore=125.5869;InbreedingCoeff=-0.2350;MQ=63.28;MQ0=24;MQRankSum=2.159;QD=5.84;ReadPosRankSum=7.913;VQSLOD=0.9365;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:30:62.90:0,63,968	0/0:10,0:9:6.01:0,6,159	0/0:30,0:20:47:0,47,538	0/0:20,0:16:28.42:0,28,506	0/1:18,0:17:74.83:181,0,75	0/0:18,0:17:39.48:0,39,619	0/0:27,0:26:30.13:0,30,771	0/0:42,0:42:99:0,114,1798	0/0:12,0:12:24.07:0,24,517	0/1:23,0:23:99:204,0,175	0/1:12,0:11:11.72:12,0,19	0/0:22,0:21:48.27:0,48,1066	0/1:4,17:21:36.19:36,0,59	0/1:18,0:17:58.76:196,0,59	0/0:28,0:28:63.02:0,63,1100	0/1:19,0:18:47.72:48,0,293	0/1:21,0:20:98.33:164,0,98	0/1:28,0:26:1.65:2,0,228	0/0:15,0:15:38.96:0,39,463	0/0:16,0:16:29.57:0,30,480	0/0:25,0:25:56.46:0,56,1031	0/0:16,0:14:42.04:0,42,656	0/0:13,0:12:27.03:0,27,464	0/0:21,0:21:35.77:0,36,659	0/0:18,0:17:45.08:0,45,794	0/1:37,0:35:99:329,0,270	0/1:21,0:21:99:218,0,116	0/1:17,0:13:99:127,0,102
chr10	19023044	.	C	CT	1962.74	PASS	AB=0.987;AC=26;AF=0.464;AN=56;BaseQRankSum=4.306;DP=426;FS=5.061;HRun=5;HaplotypeScore=88.5203;InbreedingCoeff=0.6746;MQ=73.03;MQ0=1;MQRankSum=-1.200;QD=9.57;ReadPosRankSum=0.511;VQSLOD=0.6582;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:18,1:19:33.26:138,33,0	1/1:5,0:5:5.15:48,5,0	0/1:15,0:11:14.52:15,0,63	0/0:14,0:12:5.74:0,6,125	1/1:10,1:11:19.75:137,20,0	0/0:28,1:29:60.69:0,61,444	0/0:18,0:18:38.39:0,38,313	0/0:35,0:35:80.16:0,80,700	1/1:12,0:12:20.87:94,21,0	1/1:13,1:14:38.16:230,38,0	1/1:11,0:11:11.80:111,12,0	0/0:8,1:9:19.16:0,19,129	1/1:12,3:15:40.33:274,40,0	1/1:10,1:11:17.76:132,18,0	0/0:10,0:10:23.55:0,24,165	1/1:15,0:15:32.48:221,32,0	1/1:16,0:16:1.98:184,2,0	0/1:9,0:9:5.54:68,0,6	0/0:15,0:15:41.74:0,42,369	0/0:18,1:19:20.90:0,21,289	0/0:11,0:11:29.69:0,30,235	0/0:17,0:17:38.96:0,39,303	0/0:12,0:12:31.11:0,31,251	0/0:15,0:15:29.34:0,29,223	0/0:16,1:17:12.47:0,12,234	1/1:21,1:22:34.29:232,34,0	0/1:17,1:18:19.61:162,0,20	0/1:11,0:11:5.58:127,0,6
chr10	19023049	.	T	TG	5719.84	PASS	AB=1.000;AC=36;AF=0.643;AN=56;BaseQRankSum=0.223;DP=451;FS=0.459;HRun=1;HaplotypeScore=74.4077;InbreedingCoeff=0.4563;MQ=69.25;MQ0=1;MQRankSum=0.237;QD=17.49;ReadPosRankSum=5.357;VQSLOD=5.1726;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:21:45.19:505,45,0	1/1:0,5:5:14.77:158,15,0	0/1:13,0:7:2.36:2,0,69	0/0:12,0:11:14.16:0,14,146	1/1:4,8:12:32.92:374,33,0	0/1:31,0:31:4.04:4,0,182	0/0:19,0:19:13.92:0,14,164	0/0:37,0:37:21.16:0,21,281	1/1:11,2:13:35.90:341,36,0	1/1:5,9:14:42.10:532,42,0	1/1:7,4:11:28.18:297,28,0	0/1:10,0:10:10.36:10,0,40	1/1:7,8:15:36.46:500,36,0	1/1:3,8:11:12.06:222,12,0	0/1:11,0:12:8.80:9,0,17	1/1:0,15:15:33.11:482,33,0	1/1:11,6:17:42.95:540,43,0	1/1:7,4:11:16.75:202,17,0	0/0:16,0:16:10.96:0,11,162	0/0:22,0:22:2.52:0,3,133	0/1:12,0:12:3.62:4,0,50	0/1:19,0:19:4.26:4,0,139	0/0:16,0:16:7.34:0,7,146	0/1:15,0:15:9.06:9,0,43	0/1:18,0:18:9.94:10,0,68	1/1:13,9:22:54.92:647,55,0	1/1:14,5:19:48.19:476,48,0	1/1:3,8:11:30.47:392,30,0
chr10	19023050	.	G	GT	5620.79	PASS	AB=0.780;AC=47;AF=0.839;AN=56;BaseQRankSum=-0.754;DP=451;FS=3.989;HRun=12;HaplotypeScore=76.3286;InbreedingCoeff=0.0130;MQ=69.32;MQ0=1;MQRankSum=1.138;QD=12.89;ReadPosRankSum=1.729;VQSLOD=5.1776;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,0:21:47.26:237,47,0	1/1:5,0:5:8.91:66,9,0	1/1:12,0:6:0.47:1,0,0	0/0:14,0:12:0.05:0,0,41	1/1:12,0:12:20.74:146,21,0	1/1:18,13:31:23.87:502,24,0	0/1:6,10:19:11.26:185,0,11	1/1:12,27:40:46.88:538,47,0	1/1:6,0:13:25.66:131,26,0	1/1:12,1:14:38.54:245,39,0	1/1:9,0:10:15.37:90,15,0	1/1:6,5:11:20.82:179,21,0	1/1:15,0:15:16.59:200,17,0	0/1:10,0:11:0.61:92,0,1	1/1:5,5:10:24.03:229,24,0	1/1:14,0:14:32.54:213,33,0	1/1:16,0:17:9.57:184,10,0	0/1:10,0:10:13.09:62,0,13	0/1:8,8:16:7.65:251,0,8	1/1:14,7:22:22.79:343,23,0	1/1:5,7:12:24.03:229,24,0	0/1:7,12:19:3.81:280,0,4	0/1:11,5:16:13.79:198,0,14	1/1:2,12:15:26.88:248,27,0	1/1:8,8:18:20.05:327,20,0	1/1:20,1:22:19.74:203,20,0	0/1:18,0:20:16.23:114,0,16	1/1:10,0:11:0.92:126,1,0
chr10	19023136	.	GAA	G	11585.77	PASS	AB=0.964;AC=54;AF=0.964;AN=56;BaseQRankSum=-4.671;DP=468;FS=8.448;HRun=11;HaplotypeScore=68.1846;InbreedingCoeff=0.4965;MQ=73.73;MQ0=1;MQRankSum=-1.756;QD=24.76;ReadPosRankSum=1.907;VQSLOD=4.2621;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,18:20:48.12:511,48,0	1/1:0,3:3:9.02:96,9,0	0/1:12,0:11:1.33:1,0,71	0/1:12,0:12:2.64:3,0,42	1/1:0,14:14:39.02:401,39,0	1/1:3,20:23:54.13:575,54,0	1/1:0,12:12:24.06:255,24,0	1/1:5,29:34:87.16:901,87,0	1/1:1,13:14:36.09:383,36,0	1/1:2,16:18:48.11:511,48,0	1/1:1,14:17:26.97:398,27,0	1/1:3,7:9:18.04:191,18,0	1/1:3,14:17:42.10:447,42,0	1/1:2,9:11:30.08:319,30,0	1/1:3,21:24:54.13:575,54,0	1/1:0,17:17:51.13:543,51,0	1/1:2,25:27:69.11:721,69,0	1/1:1,11:12:30.07:319,30,0	1/1:1,14:15:42.08:438,42,0	1/1:3,26:29:69.07:720,69,0	1/1:1,7:8:21.05:224,21,0	1/1:5,6:11:24.02:243,24,0	1/1:2,17:19:47.89:511,48,0	1/1:4,4:8:15.03:160,15,0	1/1:3,18:21:48.11:511,48,0	1/1:2,20:22:60.06:609,60,0	1/1:2,27:29:78.18:830,78,0	1/1:2,6:8:18.01:192,18,0
chr10	19023412	.	GAA	G	8440.81	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-3.235;DP=601;FS=0.344;HRun=10;HaplotypeScore=110.2276;InbreedingCoeff=0.9895;MQ=69.35;MQ0=3;MQRankSum=-0.574;QD=25.81;ReadPosRankSum=3.684;VQSLOD=4.5571;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,34:35:84.23:936,84,0	1/1:1,9:10:21.05:234,21,0	0/0:26,0:15:16.48:0,16,324	0/0:19,0:13:23.60:0,24,267	1/1:3,27:30:72.17:803,72,0	0/0:3,0:21:42.42:0,42,146	0/0:1,0:17:32.44:0,32,112	0/0:4,0:32:70.09:0,70,246	1/1:1,19:20:48.12:535,48,0	1/1:1,16:17:39.19:435,39,0	1/1:4,23:27:63.11:700,63,0	0/0:0,1:20:9.49:0,9,104	1/1:1,14:15:39.10:435,39,0	1/1:2,17:19:48.13:535,48,0	0/0:4,0:28:59.89:0,60,206	1/1:1,23:24:60.16:669,60,0	1/1:6,29:35:69.17:769,69,0	1/1:4,18:21:42.10:468,42,0	0/0:4,0:17:35.95:0,36,158	0/0:1,0:16:34.93:0,35,120	0/0:0,0:9:19.96:0,20,69	0/0:0,0:14:34.93:0,35,120	0/0:0,0:21:49.91:0,50,172	0/0:4,0:14:33.97:0,34,207	0/0:0,0:19:47.41:0,47,163	1/1:3,27:30:78.18:852,78,0	1/1:3,23:26:56.95:635,57,0	1/1:2,15:17:39.09:435,39,0
chr10	19029424	.	GGAGAGA	G	4088.59	PASS	AB=0.733;AC=38;AF=0.792;AN=48;BaseQRankSum=-0.697;DP=455;FS=7.855;HRun=0;HaplotypeScore=127.4901;InbreedingCoeff=0.0017;MQ=51.09;MQ0=16;MQRankSum=-0.366;QD=11.72;ReadPosRankSum=3.049;VQSLOD=2.0220;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:5,0:11:3.98:40,0,4	./.	./.	./.	1/1:4,0:16:5.64:28,6,0	1/1:10,3:12:8.94:102,9,0	1/1:7,5:18:18.02:263,18,0	0/1:35,7:42:21.59:320,0,22	1/1:5,0:19:13.07:275,13,0	0/0:9,0:9:6.02:0,6,100	1/1:6,0:15:0.58:47,1,0	1/1:10,8:20:21.96:414,22,0	0/1:9,0:13:89.23:141,0,89	1/1:6,0:14:8.65:125,9,0	1/1:5,9:15:21.07:412,21,0	0/1:8,0:21:8.51:343,0,9	0/1:9,0:11:28.22:36,0,28	0/0:6,0:4:2.80:0,3,13	1/1:10,3:14:12.02:209,12,0	1/1:7,10:19:24.04:393,24,0	1/1:11,4:16:3.01:35,3,0	./.	1/1:5,6:11:2.89:20,3,0	1/1:6,2:8:3.01:61,3,0	0/1:10,8:19:14.31:504,0,14	1/1:4,0:12:1.66:115,2,0	1/1:7,0:15:9.03:126,9,0	1/1:1,0:5:6.02:81,6,0
chr10	19029440	.	A	AG	566.09	PASS	AB=0.900;AC=9;AF=0.161;AN=56;BaseQRankSum=5.472;DP=431;FS=1.537;HRun=1;HaplotypeScore=104.4222;InbreedingCoeff=0.1660;MQ=43.72;MQ0=34;MQRankSum=-2.112;QD=6.74;ReadPosRankSum=2.223;VQSLOD=0.9076;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:7:2.17:0,2,21	0/0:3,0:3:3.01:0,3,38	0/0:24,0:6:12.51:0,13,151	0/0:47,0:9:23.64:0,24,247	0/1:16,0:14:23.56:63,0,24	0/0:12,0:12:28.96:0,29,353	0/0:16,0:16:29.41:0,29,296	0/0:40,0:40:99:0,111,1299	0/0:15,0:14:18.79:0,19,84	0/1:3,3:5:42.99:89,0,43	1/1:13,0:12:0.77:76,1,0	0/0:21,0:21:55.36:0,55,464	0/1:12,3:13:35.08:181,0,35	0/0:12,0:10:6.83:0,7,23	0/0:15,0:15:28.55:0,29,191	0/1:17,0:17:4.44:76,0,4	0/0:11,0:10:4.30:0,4,107	0/0:5,3:5:11.78:0,12,109	0/0:13,0:13:35.52:0,36,383	0/0:16,0:16:35.19:0,35,310	0/0:15,0:15:11.78:0,12,133	0/0:14,0:11:18.05:0,18,222	0/0:16,0:16:27.02:0,27,341	0/0:8,0:8:17.89:0,18,203	0/0:20,0:20:58.28:0,58,538	0/1:10,0:10:20.33:180,0,20	0/0:12,0:12:9.77:0,10,90	1/1:6,1:4:5.04:34,5,0
chr10	19029727	.	C	CA	12903.94	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-10.433;DP=648;FS=2.478;HRun=2;HaplotypeScore=62.8098;InbreedingCoeff=0.9988;MQ=81.77;MQ0=0;MQRankSum=-5.633;QD=39.10;ReadPosRankSum=2.002;VQSLOD=5.4720;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,45:45:99:1770,123,0	1/1:1,11:12:33.11:475,33,0	0/0:19,0:19:44.81:0,45,507	0/0:20,0:20:41.30:0,41,518	1/1:1,27:28:75.25:1080,75,0	0/0:25,0:25:66.19:0,66,804	0/0:29,0:29:87.20:0,87,1013	0/0:24,0:24:66.20:0,66,808	1/1:0,20:20:54.18:777,54,0	1/1:1,29:30:87.25:1200,87,0	1/1:1,19:20:48.08:644,48,0	0/0:25,0:25:69.22:0,69,855	1/1:2,19:21:60.20:858,60,0	1/1:1,24:25:72.24:1035,72,0	0/0:24,0:24:72.22:0,72,880	1/1:0,32:32:93.31:1339,93,0	1/1:0,17:17:45.15:648,45,0	1/1:0,9:9:18.06:259,18,0	0/0:18,0:18:45.14:0,45,558	0/0:19,0:19:54.17:0,54,669	0/0:33,0:33:93.24:0,93,1112	0/0:18,0:18:51.16:0,51,632	0/0:21,0:21:57.16:0,57,693	0/0:27,0:27:78.18:0,78,935	0/0:16,0:16:48.15:0,48,594	1/1:2,25:27:69.19:966,69,0	1/1:0,27:27:81.27:1161,81,0	1/1:0,17:17:48.16:691,48,0
chr10	19029847	.	ATT	A	4954.44	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=12.423;DP=615;FS=7.034;HRun=10;HaplotypeScore=149.1456;InbreedingCoeff=0.9735;MQ=75.85;MQ0=1;MQRankSum=-10.380;QD=25.67;ReadPosRankSum=4.151;VQSLOD=3.3223;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:32:61.37:0,61,271	1/1:0,8:8:21.05:234,21,0	0/0:15,0:14:20.63:0,21,263	0/0:22,0:20:38.05:0,38,462	1/1:3,28:31:63.14:702,63,0	0/0:21,0:21:60.19:0,60,910	0/0:26,0:26:66.21:0,66,1025	0/0:30,0:32:89.74:0,90,1300	0/0:4,0:19:6.25:0,6,104	1/1:3,25:28:72.18:802,72,0	1/1:2,15:17:42.11:468,42,0	0/0:24,0:25:75.22:0,75,1124	1/1:3,21:24:54.13:602,54,0	1/1:2,18:20:45.11:501,45,0	0/0:30,0:31:92.79:0,93,1395	0/0:2,0:29:65.36:0,65,235	1/1:3,7:10:17.98:185,18,0	0/0:0,0:11:22.69:0,23,88	0/0:18,0:18:42.12:0,42,621	0/0:26,0:26:78.21:0,78,1130	0/0:17,0:17:45.14:0,45,690	0/0:15,0:15:42.14:0,42,647	0/0:33,0:33:96.29:0,96,1458	0/0:21,0:21:63.17:0,63,971	0/0:28,0:28:72.24:0,72,1120	1/1:2,23:26:60.09:727,60,0	1/1:3,21:24:57.01:633,57,0	1/1:1,4:5:9.02:100,9,0
chr10	19030016	.	A	ACC	13352.95	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-12.504;DP=672;FS=0.967;HRun=5;HaplotypeScore=78.5317;InbreedingCoeff=0.9988;MQ=90.20;MQ0=3;MQRankSum=-2.582;QD=41.99;ReadPosRankSum=5.627;VQSLOD=3.9553;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,48:51:99:2149,123,0	1/1:0,11:11:21.07:365,21,0	0/0:24,0:24:54.16:0,54,675	0/0:33,0:33:80.23:0,80,966	1/1:3,29:32:81.10:1286,81,0	0/0:28,0:28:75.22:0,75,940	0/0:22,0:22:57.16:0,57,711	0/0:35,0:35:87.26:0,87,1086	1/1:0,20:20:54.18:943,54,0	1/1:1,11:11:33.11:577,33,0	1/1:2,17:19:48.16:839,48,0	0/0:33,0:33:96.31:0,96,1222	1/1:5,27:33:69.24:1206,69,0	1/1:3,18:22:51.17:881,51,0	0/0:24,0:24:63.20:0,63,802	1/1:0,28:28:78.22:1330,78,0	1/1:2,25:27:72.25:1259,72,0	1/1:3,9:14:24.08:420,24,0	0/0:17,0:17:42.11:0,42,516	0/0:20,0:20:57.18:0,57,726	0/0:24,0:24:66.21:0,66,841	0/0:26,0:26:75.22:0,75,942	0/0:22,0:22:66.21:0,66,841	0/0:32,0:32:84.26:0,84,1071	0/0:14,0:14:33.10:0,33,421	1/1:1,14:15:45.15:785,45,0	1/1:2,18:21:51.17:892,51,0	1/1:2,10:9:24.08:420,24,0
chr10	19030589	.	G	GA	5585.27	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=1.341;DP=687;FS=6.164;HRun=10;HaplotypeScore=99.5679;InbreedingCoeff=0.9589;MQ=59.84;MQ0=3;MQRankSum=0.460;QD=20.31;ReadPosRankSum=-1.660;VQSLOD=4.4581;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,1:26:16.83:0,17,368	1/1:0,10:10:27.07:287,27,0	0/0:13,0:8:20.96:0,21,172	0/0:9,0:11:27.03:0,27,182	1/1:11,30:41:7.30:494,7,0	0/0:26,1:27:65.46:0,65,519	0/0:25,0:25:53.88:0,54,443	0/0:26,0:26:67.12:0,67,539	0/0:28,0:28:65.88:0,66,541	1/1:7,31:38:70.83:899,71,0	1/1:7,23:29:39.19:574,39,0	0/0:23,0:23:62.86:0,63,510	1/1:3,30:33:35.79:584,36,0	1/1:3,21:24:54.14:576,54,0	0/0:29,0:29:74.87:0,75,615	0/0:29,0:29:71.90:0,72,591	1/1:2,18:20:45.11:480,45,0	0/0:18,0:18:38.91:0,39,320	0/0:17,1:18:6.92:0,7,261	0/0:26,0:26:67.16:0,67,498	0/0:22,0:22:43.97:0,44,382	0/0:16,0:16:35.88:0,36,285	0/0:22,0:22:44.08:0,44,295	0/0:21,0:21:50.88:0,51,413	0/0:28,1:29:45.35:0,45,530	1/1:4,27:30:53.03:705,53,0	1/1:6,29:35:28.92:718,29,0	1/1:3,10:13:6.98:269,7,0
chr10	19031432	.	T	TC	1338.12	PASS	AB=0.753;AC=11;AF=0.196;AN=56;BaseQRankSum=11.235;DP=588;FS=5.350;HRun=1;HaplotypeScore=121.1834;InbreedingCoeff=-0.2445;MQ=85.91;MQ0=0;MQRankSum=-9.937;QD=7.69;ReadPosRankSum=0.271;VQSLOD=0.7689;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:17,4:21:70.13:70,0,551	0/1:2,4:6:65.02:130,0,65	0/0:20,0:20:47.29:0,47,673	0/0:27,0:26:69.15:0,69,874	0/0:17,8:25:27.06:0,27,342	0/0:28,0:28:84.21:0,84,1090	0/0:24,0:24:69.21:0,69,933	0/0:17,0:17:48.13:0,48,638	0/1:9,2:11:57.64:58,0,321	0/1:13,8:21:99:228,0,411	0/1:9,6:15:65.45:65,0,211	0/0:35,0:35:99:0,102,1320	0/1:13,8:21:99:280,0,440	0/1:18,7:25:99:239,0,531	0/0:28,0:28:84.27:0,84,1156	0/0:16,0:16:39.66:0,40,603	0/1:12,3:15:88.33:88,0,415	0/0:22,0:22:66.15:0,66,864	0/0:14,0:14:42.11:0,42,552	0/0:16,0:16:48.11:0,48,612	0/0:52,0:52:99:0,148,1914	0/0:27,0:27:66.50:0,66,770	0/0:15,0:15:42.05:0,42,506	0/0:28,0:28:84.27:0,84,1157	0/0:20,0:20:60.16:0,60,787	0/1:14,4:18:99:128,0,457	0/1:7,5:12:49.47:49,0,205	0/1:5,4:9:99:152,0,164
chr10	19031507	.	A	ACTGCAT	15929.38	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=17.793;DP=566;FS=18.891;HRun=0;HaplotypeScore=185.8170;InbreedingCoeff=0.9976;MQ=70.20;MQ0=0;MQRankSum=-17.976;QD=82.97;ReadPosRankSum=-0.356;VQSLOD=4.4040;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,8:18:21.03:629,21,0	1/1:3,6:9:27.09:926,27,0	0/0:13,0:13:39.13:0,39,903	0/0:14,0:14:39.13:0,39,843	1/1:5,7:13:27.09:872,27,0	0/0:30,0:30:90.29:0,90,2186	0/0:28,0:28:84.25:0,84,1996	0/0:26,0:26:72.21:0,72,1613	1/1:5,10:17:32.82:1174,33,0	1/1:5,15:22:60.21:2114,60,0	1/1:3,7:11:24.08:757,24,0	0/0:29,0:29:87.28:0,87,2176	1/1:7,15:23:62.80:2104,63,0	1/1:5,11:18:48.16:1716,48,0	0/0:22,0:22:60.21:0,60,1500	0/0:20,0:20:60.18:0,60,1390	1/1:5,11:16:39.13:1391,39,0	0/0:22,0:22:66.21:0,66,1595	0/0:17,0:17:51.16:0,51,1106	0/0:17,0:17:51.17:0,51,1225	0/0:56,0:56:99:0,165,4064	0/0:19,0:19:57.20:0,57,1459	0/0:13,0:13:39.12:0,39,930	0/0:37,0:37:99:0,111,2781	0/0:11,0:11:33.11:0,33,846	1/1:4,18:22:60.21:2129,60,0	1/1:4,12:17:48.12:1567,48,0	1/1:4,2:6:18.06:551,18,0
chr10	19033381	.	G	GT	6803.46	PASS	AB=0.857;AC=29;AF=0.518;AN=56;BaseQRankSum=-6.411;DP=560;FS=2.461;HRun=9;HaplotypeScore=55.7900;InbreedingCoeff=0.8901;MQ=70.92;MQ0=1;MQRankSum=-3.055;QD=22.16;ReadPosRankSum=3.608;VQSLOD=5.7348;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,1:17:34.76:190,35,0	1/1:2,10:12:30.04:318,30,0	0/0:10,0:10:11.03:0,11,70	0/0:13,0:13:26.10:0,26,190	1/1:4,26:29:78.21:861,78,0	0/0:22,0:22:47.93:0,48,409	0/0:18,0:18:47.97:0,48,412	0/0:25,0:25:65.96:0,66,570	1/1:5,0:18:34.09:171,34,0	1/1:3,22:25:66.14:711,66,0	1/1:6,18:26:53.81:559,54,0	0/0:13,0:13:32.99:0,33,287	1/1:3,27:30:72.19:796,72,0	1/1:3,18:21:45.12:498,45,0	0/0:28,0:28:74.97:0,75,651	1/1:2,0:17:39.77:199,40,0	1/1:2,21:24:63.16:688,63,0	1/1:0,0:3:8.52:43,9,0	0/0:20,0:20:50.96:0,51,437	0/0:29,0:29:80.97:0,81,703	0/1:10,2:12:36.36:36,0,178	0/0:22,0:22:62.97:0,63,543	0/0:20,0:20:44.96:0,45,391	0/0:9,0:9:23.97:0,24,204	0/0:23,0:23:59.98:0,60,521	1/1:2,22:24:66.15:711,66,0	1/1:4,38:44:86.29:990,86,0	1/1:1,3:4:3.01:33,3,0
chr10	19034116	.	A	AAAAC	13286.41	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-5.753;DP=655;FS=18.084;HRun=0;HaplotypeScore=109.4043;InbreedingCoeff=0.9890;MQ=80.65;MQ0=0;MQRankSum=-5.100;QD=57.02;ReadPosRankSum=2.460;VQSLOD=5.1484;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:96.29:0,96,1593	1/1:1,9:10:27.09:661,27,0	0/0:27,0:27:48.25:0,48,961	0/0:13,0:13:21.01:0,21,294	1/1:9,21:30:51.17:1247,51,0	0/0:32,0:32:81.28:0,81,1395	0/0:29,0:29:66.18:0,66,1055	0/0:31,0:31:75.21:0,75,1191	0/0:20,0:20:39.13:0,39,678	1/1:8,20:28:63.22:1548,63,0	1/1:5,22:27:66.23:1666,66,0	0/0:33,0:33:90.31:0,90,1553	1/1:6,30:36:90.31:2280,90,0	1/1:5,22:27:63.22:1557,63,0	0/0:24,0:24:63.20:0,63,1067	0/0:23,0:23:60.21:0,60,1040	1/1:3,17:20:45.01:1136,45,0	0/0:7,0:7:18.06:0,18,313	0/0:21,0:21:51.17:0,51,846	0/0:19,0:19:57.18:0,57,959	0/0:14,0:14:33.11:0,33,574	0/0:12,0:12:24.07:0,24,390	0/0:28,0:28:75.26:0,75,1304	0/0:25,0:25:63.22:0,63,1091	0/0:28,0:28:84.28:0,84,1430	1/1:3,19:22:57.20:1445,57,0	1/1:6,23:28:60.21:1519,60,0	1/1:1,3:4:9.03:228,9,0
chr10	19035492	.	C	CTGTCTCTA	10648.34	PASS	AB=1.000;AC=25;AF=0.446;AN=56;BaseQRankSum=-4.681;DP=671;FS=2.425;HRun=0;HaplotypeScore=138.4989;InbreedingCoeff=0.7459;MQ=55.57;MQ0=7;MQRankSum=-10.749;QD=33.28;ReadPosRankSum=4.854;VQSLOD=4.7547;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:27:15.05:551,15,0	0/1:9,0:9:11.93:321,0,12	0/0:30,0:18:36:0,36,601	0/0:30,0:22:32.30:0,32,521	1/1:16,0:16:9.03:333,9,0	0/0:25,0:25:60.19:0,60,1351	0/0:22,0:22:54.17:0,54,1073	0/0:36,0:36:66.20:0,66,959	0/1:33,0:33:8.81:1178,0,9	1/1:20,0:20:45.11:803,45,0	1/1:15,0:15:6.49:147,6,0	0/0:21,0:21:45.14:0,45,938	1/1:25,0:25:24.08:871,24,0	1/1:29,0:29:36.12:1328,36,0	0/0:34,0:34:81.24:0,81,1803	1/1:6,35:41:38.84:1643,39,0	0/1:20,0:20:45.96:238,0,46	1/1:3,17:23:3.90:373,4,0	0/0:17,0:17:42.12:0,42,811	0/0:22,0:22:42.10:0,42,785	0/0:31,0:31:66.20:0,66,1422	0/0:15,0:15:36.12:0,36,732	0/0:15,0:15:39.07:0,39,739	0/0:34,0:34:87.26:0,87,1881	0/0:19,0:19:42.14:0,42,869	1/1:22,0:22:54.16:1112,54,0	1/1:30,0:30:45.15:1569,45,0	1/1:10,0:10:12.04:181,12,0
chr10	19035500	.	A	ATGTCTCTG	12904.63	PASS	AB=0.852;AC=25;AF=0.446;AN=56;BaseQRankSum=-9.798;DP=714;FS=0.379;HRun=0;HaplotypeScore=143.4706;InbreedingCoeff=0.7880;MQ=59.60;MQ0=6;MQRankSum=-9.097;QD=35.65;ReadPosRankSum=4.696;VQSLOD=4.4509;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,30:40:12.04:514,12,0	1/1:2,8:11:11.78:397,12,0	0/0:29,0:19:38.27:0,38,824	0/0:31,0:24:34.28:0,34,615	1/1:3,15:20:9.03:385,9,0	0/0:25,0:25:69.17:0,69,1527	0/0:23,0:23:60.14:0,60,1236	0/0:35,0:35:78.09:0,78,1130	1/1:5,26:31:33.11:1414,33,0	1/1:4,17:25:63.17:1398,63,0	1/1:2,15:19:8.98:200,9,0	0/0:20,0:20:51.14:0,51,1119	1/1:4,25:32:24.02:1009,24,0	1/1:2,23:26:36.12:1533,36,0	0/0:31,0:31:87.25:0,87,2034	0/1:42,0:42:5.08:1365,0,5	0/1:5,18:25:6.28:297,0,6	0/1:24,0:24:26.94:412,0,27	0/0:18,0:18:51.14:0,51,1060	0/0:24,0:24:57.09:0,57,1032	0/0:30,0:30:75.18:0,75,1577	0/0:16,0:16:39.12:0,39,892	0/0:17,0:17:45.10:0,45,820	0/0:35,0:35:93.24:0,93,2058	0/0:18,0:18:45.09:0,45,922	1/1:2,21:27:78.17:1824,78,0	1/1:0,28:32:45.15:1840,45,0	1/1:8,0:8:18.02:317,18,0
chr10	19036477	.	G	GC	7875.05	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=5.635;DP=642;FS=2.964;HRun=3;HaplotypeScore=77.0804;InbreedingCoeff=0.9931;MQ=85.87;MQ0=0;MQRankSum=-3.922;QD=27.54;ReadPosRankSum=4.344;VQSLOD=4.0719;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,52:54:99:2058,147,0	1/1:5,0:5:14.97:125,15,0	0/0:27,0:27:68.44:0,68,826	0/0:15,0:15:32.81:0,33,359	1/1:17,0:17:50.74:384,51,0	0/0:22,0:22:63.19:0,63,756	0/0:30,0:30:87.27:0,87,1044	0/0:27,0:27:72.22:0,72,864	1/1:1,17:18:42.14:587,42,0	1/1:11,0:11:32.63:233,33,0	1/1:12,0:12:29.90:232,30,0	0/0:40,0:40:99:0,111,1320	1/1:27,1:28:71.86:610,72,0	1/1:16,1:17:47.92:418,48,0	0/0:26,0:26:72.22:0,72,864	1/1:1,24:25:69.23:966,69,0	1/1:32,0:32:83.71:654,84,0	1/1:0,13:13:33.11:462,33,0	0/0:19,0:19:54.15:0,54,631	0/0:27,0:27:78.22:0,78,923	0/0:42,0:42:99:0,121,1427	0/0:10,0:10:27.08:0,27,324	0/0:11,0:11:27.04:0,27,308	0/0:31,0:31:93.29:0,93,1115	0/0:29,0:29:84.26:0,84,1006	1/1:24,0:24:65.53:497,66,0	1/1:26,0:26:68.79:550,69,0	1/1:4,0:4:11.98:99,12,0
chr10	19036480	.	C	CT	9538.73	PASS	AB=1.000;AC=27;AF=0.482;AN=56;BaseQRankSum=-0.416;DP=642;FS=2.051;HRun=0;HaplotypeScore=69.1391;InbreedingCoeff=0.9435;MQ=84.24;MQ0=0;MQRankSum=-4.111;QD=33.47;ReadPosRankSum=4.672;VQSLOD=4.5583;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:54,0:54:99:960,136,0	1/1:1,6:7:15.05:239,15,0	0/0:25,0:25:69.23:0,69,950	0/0:15,0:15:38.89:0,39,475	1/1:0,17:17:51.17:802,51,0	0/0:21,0:21:63.21:0,63,879	0/0:31,0:31:93.26:0,93,1257	0/0:25,0:25:75.20:0,75,1024	0/1:19,0:19:3.59:218,0,4	1/1:0,12:12:36.11:549,36,0	1/1:0,10:10:30.10:479,30,0	0/0:42,0:42:99:0,117,1569	1/1:1,25:26:75.20:1156,75,0	1/1:1,16:17:48.16:759,48,0	0/0:26,0:26:75.23:0,75,1029	1/1:24,0:24:55.89:418,56,0	1/1:0,32:32:84.29:1342,84,0	1/1:12,0:12:32.29:203,32,0	0/0:21,0:21:57.14:0,57,756	0/0:27,0:27:78.24:0,78,1066	0/0:43,0:43:99:0,124,1693	0/0:9,0:9:27.09:0,27,370	0/0:10,0:10:30.01:0,30,373	0/0:32,0:32:93.31:0,93,1295	0/0:30,0:30:90.25:0,90,1216	1/1:1,25:26:72.22:1102,72,0	1/1:0,25:25:72.18:1119,72,0	1/1:0,4:4:12.04:192,12,0
chr10	19036688	.	GGAGACGTTCTAAT	G	14270.94	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=16.490;DP=716;FS=2.632;HRun=0;HaplotypeScore=266.6827;InbreedingCoeff=0.9849;MQ=93.20;MQ0=0;MQRankSum=-16.665;QD=80.17;ReadPosRankSum=5.061;VQSLOD=4.1773;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,154,9373	1/1:4,6:10:18.06:718,18,0	0/0:35,0:35:99:0,102,5617	0/0:32,0:32:90.30:0,90,4893	1/1:6,19:25:51.18:2033,51,0	0/0:32,0:32:93.32:0,93,5948	0/0:27,0:27:75.24:0,75,4415	0/0:21,0:21:57.19:0,57,3423	0/0:25,0:25:72.23:0,72,4482	1/1:2,16:18:45.14:1702,45,0	1/1:1,6:7:12.04:479,12,0	0/0:29,0:29:84.29:0,84,5258	1/1:1,25:26:57.15:2175,57,0	1/1:3,19:22:54.14:2053,54,0	0/0:36,0:36:99:0,108,6629	0/0:29,0:29:87.30:0,87,5618	1/1:5,17:22:21.07:838,21,0	0/0:23,0:23:63.19:0,63,3521	0/0:27,0:27:72.25:0,72,4116	0/0:13,0:13:36.12:0,36,2106	0/0:53,0:53:99:0,157,9444	0/0:21,0:21:60.19:0,60,3628	0/0:17,0:17:48.16:0,48,2941	0/0:40,0:40:99:0,108,6617	0/0:25,0:25:72.24:0,72,4462	1/1:5,17:22:51.17:1996,51,0	1/1:3,20:23:48.16:1916,48,0	1/1:0,3:3:9.03:359,9,0
chr10	19037056	.	T	TTC	3614.20	PASS	AB=0.815;AC=37;AF=0.712;AN=52;BaseQRankSum=1.847;DP=589;FS=0.000;HRun=0;HaplotypeScore=132.2248;InbreedingCoeff=0.1010;MQ=59.45;MQ0=6;MQRankSum=-1.827;QD=7.33;ReadPosRankSum=-1.706;VQSLOD=3.0986;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:30:12.27:99,12,0	1/1:5,0:5:2.98:22,3,0	./.	./.	1/1:22,0:23:11.30:102,11,0	0/0:18,0:18:8.85:0,9,80	0/0:13,0:18:20.46:0,20,161	1/1:26,0:25:5.98:59,6,0	1/1:15,1:18:17.98:168,18,0	1/1:17,0:18:17.89:160,18,0	1/1:19,0:17:11.99:123,12,0	0/1:21,9:30:18.20:408,0,18	1/1:26,0:27:19.73:211,20,0	1/1:22,0:24:23.72:207,24,0	0/0:30,0:31:32.80:0,33,302	0/1:27,0:29:1.17:123,0,1	1/1:9,0:12:8.93:64,9,0	1/1:13,0:16:6:53,6,0	0/1:14,6:20:9.34:178,0,9	1/1:19,2:21:7.39:278,7,0	0/1:13,5:17:20.90:123,0,21	0/1:19,2:21:25.57:121,0,26	0/1:15,8:24:29.05:162,0,29	0/1:23,3:26:8.85:282,0,9	0/1:11,1:15:30.37:30,0,79	1/1:18,0:22:8.27:181,8,0	1/1:35,0:39:39.02:417,39,0	0/1:2,0:6:24.04:43,0,24
chr10	19037159	.	TTGTGTGTGTGTGTGTGTGTG	T	6568.54	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=4.377;DP=589;FS=18.076;HRun=0;HaplotypeScore=279.6224;InbreedingCoeff=0.8940;MQ=57.27;MQ0=16;MQRankSum=-3.535;QD=36.49;ReadPosRankSum=-1.009;VQSLOD=2.0118;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:24:36.10:0,36,1122	1/1:4,5:9:8.99:339,9,0	0/0:20,0:10:9.03:0,9,226	0/0:27,0:12:15.05:0,15,335	1/1:5,8:13:8.94:115,9,0	0/0:15,0:20:30.09:0,30,758	0/0:18,0:27:42.14:0,42,1283	0/0:28,0:27:21.07:0,21,511	0/0:5,0:11:12.04:0,12,243	1/1:16,10:25:20.64:1002,21,0	1/1:13,7:20:12:410,12,0	0/0:18,0:31:47.65:0,48,1344	1/1:11,17:28:17.85:683,18,0	1/1:8,13:22:24.08:1111,24,0	0/0:17,0:31:60.21:0,60,1894	0/0:15,0:22:33.07:0,33,1207	1/1:5,8:12:15.05:772,15,0	0/0:6,0:12:24.08:0,24,1118	0/0:12,0:12:3.01:0,3,63	0/0:14,0:16:27.54:0,28,683	0/0:32,0:30:18.05:0,18,582	0/0:15,0:22:21.07:0,21,576	0/0:9,0:12:15.05:0,15,426	0/0:27,0:34:14.34:0,14,491	0/0:16,0:23:15.02:0,15,375	1/1:9,12:18:27.03:1078,27,0	1/1:8,11:19:18.26:938,18,0	1/1:9,0:8:3.01:120,3,0
chr10	19037943	.	AC	A	2964.47	PASS	AB=0.863;AC=28;AF=0.519;AN=54;BaseQRankSum=4.808;DP=450;FS=1.018;HRun=11;HaplotypeScore=60.4066;InbreedingCoeff=0.3710;MQ=62.97;MQ0=5;MQRankSum=0.703;QD=10.37;ReadPosRankSum=3.433;VQSLOD=2.8735;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:11,3:14:6.60:7,0,121	0/1:2,1:3:15.63:16,0,47	0/0:22,0:14:2.92:0,3,79	0/0:24,0:17:8.82:0,9,153	1/1:2,13:15:1.16:214,1,0	0/0:20,2:22:12.15:0,12,349	0/0:20,0:20:38.64:0,39,401	0/1:11,1:12:13.53:14,0,26	0/1:14,1:15:3.62:4,0,155	1/1:2,6:8:11.95:96,12,0	1/1:2,10:13:19.79:183,20,0	0/0:20,0:20:21.04:0,21,216	1/1:3,15:19:45.47:355,45,0	1/1:4,11:15:29.95:246,30,0	0/0:17,1:18:14.43:0,14,336	1/1:1,21:22:53.94:443,54,0	1/1:2,22:28:66.04:511,66,0	1/1:3,27:30:74.87:615,75,0	0/0:13,0:13:10.04:0,10,131	0/0:13,0:13:9.40:0,9,74	0/1:13,3:17:4.54:5,0,166	0/1:13,1:14:7.45:7,0,103	0/1:8,2:9:22.70:40,0,23	0/0:12,0:12:21.05:0,21,224	0/1:12,1:13:9.60:10,0,113	1/1:8,9:17:17.92:145,18,0	1/1:5,15:20:3.96:239,4,0	./.
chr10	19038883	.	T	TA	1090.01	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-6.463;DP=639;FS=0.629;HRun=8;HaplotypeScore=58.5900;InbreedingCoeff=0.9955;MQ=80.00;MQ0=0;MQRankSum=-0.010;QD=26.59;ReadPosRankSum=1.178;VQSLOD=4.3040;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,22:25:63.19:727,63,0	0/0:12,0:12:33:0,33,298	0/0:15,0:15:39.02:0,39,354	0/0:20,0:20:41.75:0,42,363	0/0:31,0:31:90.03:0,90,819	0/0:33,0:33:96.05:0,96,878	0/0:24,0:24:63.02:0,63,572	0/0:30,0:30:75.01:0,75,680	1/1:0,16:16:42.12:485,42,0	0/0:26,0:26:44.83:0,45,604	0/0:21,0:21:63.03:0,63,577	0/0:26,0:26:66.03:0,66,604	0/0:19,0:19:45.02:0,45,412	0/0:30,0:30:81.03:0,81,737	0/0:32,0:32:93.02:0,93,842	0/0:28,2:30:43.43:0,43,647	0/0:19,0:19:57.01:0,57,516	0/0:22,0:22:51.02:0,51,467	0/0:16,0:16:42:0,42,375	0/0:26,0:26:59.99:0,60,544	0/0:17,0:17:50.99:0,51,459	0/0:25,0:25:63.01:0,63,571	0/0:12,0:12:36:0,36,324	0/0:19,0:19:54.02:0,54,494	0/0:36,0:36:96.03:0,96,874	0/0:24,0:24:60.01:0,60,544	0/0:27,0:27:72.04:0,72,659	0/0:6,0:6:18.01:0,18,165
chr10	19040112	.	GGT	G	1446.23	PASS	AC=28;AF=0.538;AN=52;BaseQRankSum=-1.447;DP=626;FS=21.752;HRun=0;HaplotypeScore=92.2386;InbreedingCoeff=0.7967;MQ=67.83;MQ0=7;MQRankSum=4.030;QD=4.42;ReadPosRankSum=1.592;VQSLOD=0.9009;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:22:8.52:42,9,0	0/0:2,0:5:11.99:0,12,103	./.	./.	0/0:11,0:17:3.66:0,4,45	1/1:24,4:28:6.01:62,6,0	1/1:19,5:24:20.24:191,20,0	0/0:28,0:28:1.25:0,1,3	1/1:17,0:23:14.20:70,14,0	0/0:24,0:26:41.49:0,41,369	0/0:19,0:18:2.96:0,3,23	1/1:24,5:29:8.82:97,9,0	0/0:24,0:34:15.50:0,15,164	0/0:13,0:15:5.99:0,6,50	0/0:17,0:17:24.07:0,24,333	1/1:14,6:20:14.71:162,15,0	0/0:26,0:30:17.99:0,18,154	1/1:21,7:28:20.02:207,20,0	1/1:14,3:17:11.83:99,12,0	1/1:9,10:19:24.03:246,24,0	1/1:26,6:35:11.70:93,12,0	1/1:11,3:14:2.71:32,3,0	1/1:17,0:18:8.99:81,9,0	1/1:17,6:21:12.03:130,12,0	1/1:19,5:24:12.03:130,12,0	0/0:19,0:23:38.89:0,39,355	0/0:29,0:29:32.76:0,33,335	0/0:5,0:5:9.03:0,9,119
chr10	19047146	.	TAGG	T	111.16	PASS	AB=0.896;AC=9;AF=0.180;AN=50;BaseQRankSum=2.064;DP=124;FS=0.000;HRun=0;HaplotypeScore=32.8583;InbreedingCoeff=-0.0315;MQ=58.15;MQ0=2;MQRankSum=-3.007;QD=3.27;ReadPosRankSum=-1.507;VQSLOD=1.0945;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:7:15.05:0,15,321	0/0:2,0:2:0.47:0,0,1	0/0:13,0:10:27.09:0,27,481	0/0:9,0:7:21.01:0,21,354	./.	0/1:3,1:4:48.58:49,0,66	0/0:7,0:7:0.92:0,1,186	0/1:11,1:12:16.89:17,0,524	./.	0/1:2,0:2:32.50:32,0,65	0/0:3,0:3:8.90:0,9,161	0/1:2,0:2:0:0,0,0	0/0:1,0:1:3.01:0,3,70	0/0:4,0:4:6.02:0,6,138	0/0:2,0:2:6.02:0,6,130	0/1:2,1:3:45.95:46,0,133	0/1:5,0:5:3.40:3,0,123	0/1:3,1:4:40.71:41,0,135	0/0:5,0:3:9.03:0,9,182	0/0:2,0:2:2.74:0,3,12	0/0:13,2:13:14.25:0,14,318	1/1:2,0:2:3.01:40,3,0	0/0:3,1:4:10.85:0,11,204	0/0:2,1:3:3.01:0,3,74	0/0:2,0:2:3.01:0,3,51	0/0:2,0:2:6.02:0,6,104	0/0:6,0:6:11.99:0,12,214	./.
chr10	19047161	.	A	AGGTGGT	2281.64	PASS	AB=0.875;AC=46;AF=0.852;AN=54;BaseQRankSum=-2.066;DP=170;FS=1.095;HRun=0;HaplotypeScore=42.4749;InbreedingCoeff=0.2861;MQ=54.60;MQ0=5;MQRankSum=-3.565;QD=16.90;ReadPosRankSum=1.871;VQSLOD=2.3153;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,0:7:5.91:38,6,0	0/1:3,0:3:12.99:20,0,13	0/0:14,0:9:8.33:0,8,80	0/0:14,0:12:26.17:0,26,410	./.	1/1:4,0:4:6.02:142,6,0	1/1:2,7:11:3.01:100,3,0	1/1:16,0:16:21:300,21,0	1/1:2,0:2:6.02:84,6,0	1/1:2,0:2:3.90:41,4,0	0/0:2,0:3:4.55:0,5,29	1/1:4,0:4:8.82:94,9,0	0/1:2,0:3:14.97:94,0,15	1/1:1,0:5:3.69:151,4,0	1/1:4,0:4:8.95:88,9,0	1/1:3,0:3:5.98:111,6,0	1/1:7,0:7:9.55:66,10,0	1/1:6,0:6:12.01:215,12,0	1/1:5,0:2:3.01:93,3,0	1/1:0,2:2:3.01:99,3,0	1/1:20,0:16:15.47:165,15,0	1/1:0,2:2:3.01:100,3,0	1/1:5,0:5:11.92:99,12,0	1/1:8,0:8:2.98:22,3,0	1/1:0,2:2:3.01:99,3,0	1/1:3,0:3:3:26,3,0	1/1:2,1:8:8.98:171,9,0	1/1:1,0:1:0.47:1,0,0
chr10	19047325	.	T	TGACAGATGG	20841.13	PASS	AC=30;AF=0.556;AN=54;BaseQRankSum=-11.074;DP=389;FS=7.192;HRun=0;HaplotypeScore=124.9075;InbreedingCoeff=0.8923;MQ=83.73;MQ0=0;MQRankSum=-12.793;QD=83.36;ReadPosRankSum=-1.789;VQSLOD=4.0338;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,18:34:48.16:2298,48,0	0/0:2,0:2:6:0,6,114	0/0:15,0:15:33.07:0,33,863	0/0:19,0:19:26.32:0,26,957	0/0:2,0:2:5.99:0,6,112	1/1:6,6:13:30.10:985,30,0	1/1:13,23:39:87.25:3382,87,0	1/1:23,11:38:99:3744,108,0	1/1:5,11:19:42.10:1697,42,0	0/0:2,0:2:6.02:0,6,143	0/0:4,0:4:12.03:0,12,255	1/1:5,14:20:44.85:2124,45,0	0/0:20,0:20:57.20:0,57,1669	0/0:17,0:17:42.14:0,42,1210	1/1:2,6:10:24.08:960,24,0	1/1:3,6:9:27.05:1066,27,0	0/0:38,0:38:99:0,105,2926	1/1:4,3:7:18.02:740,18,0	1/1:8,5:17:39.11:1380,39,0	1/1:2,4:6:12.04:358,12,0	1/1:9,11:20:21.02:777,21,0	./.	1/1:1,3:5:9.03:325,9,0	1/1:2,8:12:17.94:861,18,0	1/1:0,1:1:3.01:144,3,0	0/0:10,0:10:24.08:0,24,685	0/0:6,0:6:18.06:0,18,471	0/0:2,0:2:6.02:0,6,180
chr10	19047431	.	A	AT	2279.35	PASS	AC=18;AF=0.333;AN=54;BaseQRankSum=-9.416;DP=341;FS=1.069;HRun=8;HaplotypeScore=49.2019;InbreedingCoeff=0.8901;MQ=76.86;MQ0=0;MQRankSum=2.352;QD=26.50;ReadPosRankSum=3.667;VQSLOD=4.1782;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:74.22:0,74,663	1/1:0,1:1:3.01:35,3,0	0/0:13,0:13:33:0,33,297	0/0:7,0:7:11.99:0,12,106	./.	0/0:11,0:11:26.99:0,27,242	0/0:24,0:24:71.96:0,72,640	0/0:31,0:31:71.93:0,72,639	0/0:16,0:16:45:0,45,406	1/1:0,5:5:15.04:173,15,0	1/1:0,1:1:3.01:35,3,0	0/0:17,0:17:41.97:0,42,375	1/1:1,16:17:45.13:519,45,0	1/1:0,12:12:30.09:346,30,0	0/0:7,0:7:14.99:0,15,137	0/0:12,0:12:36.02:0,36,329	1/1:2,12:14:33.10:381,33,0	0/0:18,0:18:54.03:0,54,494	0/0:16,0:16:20.99:0,21,192	0/0:6,0:6:12:0,12,110	0/0:22,0:22:54.02:0,54,492	0/0:5,0:5:12:0,12,109	0/0:1,0:1:3:0,3,25	0/0:13,0:13:30.01:0,30,274	0/0:4,0:4:12.01:0,12,109	1/1:1,9:10:27.06:301,27,0	1/1:4,11:15:27.08:308,27,0	1/1:0,11:11:33.10:381,33,0
chr10	19047541	.	A	ACC	1721.13	PASS	AB=1.000;AC=46;AF=0.885;AN=52;BaseQRankSum=-1.463;DP=151;FS=6.699;HRun=8;HaplotypeScore=36.9026;InbreedingCoeff=0.2512;MQ=85.91;MQ0=0;MQRankSum=-3.641;QD=13.04;ReadPosRankSum=-0.363;VQSLOD=-0.3254;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,6:12:11.01:113,11,0	1/1:0,2:2:2.84:46,3,0	0/0:6,0:5:5.99:0,6,61	0/0:10,0:9:8.83:0,9,97	./.	1/1:5,0:5:5.98:58,6,0	1/1:9,0:9:11.97:97,12,0	1/1:14,0:12:3.22:29,3,0	1/1:6,0:6:6.01:57,6,0	1/1:0,2:2:6.02:95,6,0	1/1:1,1:2:3.01:48,3,0	1/1:7,0:8:11.22:86,11,0	1/1:7,0:7:12.02:143,12,0	1/1:3,0:3:6.01:74,6,0	1/1:3,0:3:8.55:69,9,0	1/1:5,0:5:8.58:59,9,0	0/1:11,0:11:13.55:185,0,14	1/1:4,0:4:3:27,3,0	1/1:4,0:4:6.02:77,6,0	1/1:2,0:2:2.98:22,3,0	1/1:8,0:8:3:25,3,0	./.	1/1:0,0:2:3:29,3,0	0/1:2,0:2:0:0,0,0	1/1:3,0:4:9.01:95,9,0	1/1:2,7:10:18.04:261,18,0	1/1:4,1:5:3.01:48,3,0	1/1:2,0:2:6.02:95,6,0
chr10	19047549	.	CAG	C	450.62	PASS	AB=0.952;AC=12;AF=0.231;AN=52;BaseQRankSum=1.262;DP=125;FS=23.181;HRun=0;HaplotypeScore=28.3196;InbreedingCoeff=-0.3418;MQ=95.25;MQ0=0;MQRankSum=-2.287;QD=9.20;ReadPosRankSum=-0.649;VQSLOD=1.0595;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:17.97:0,18,196	0/0:2,0:2:2.80:0,3,13	0/0:6,0:5:12.34:0,12,172	0/0:12,0:11:30.10:0,30,467	./.	0/1:3,2:5:26.53:27,0,98	0/1:6,0:7:57.46:79,0,57	0/0:10,1:9:18.05:0,18,269	0/0:4,1:5:5.99:0,6,52	0/0:3,0:3:0.71:0,1,72	0/0:3,0:3:9.02:0,9,125	0/1:4,1:5:53.66:54,0,68	0/1:5,0:5:67.19:67,0,79	0/1:2,0:2:20.33:20,0,21	0/1:3,0:3:18.07:50,0,18	0/1:3,0:3:16.88:71,0,17	0/1:8,0:8:72.02:72,0,113	0/0:5,0:5:15.05:0,15,203	0/1:3,0:3:33.20:33,0,89	0/1:2,0:2:30.69:40,0,31	0/1:3,0:3:19.45:19,0,42	./.	0/0:3,0:3:5.05:0,5,42	0/0:2,0:2:3.01:0,3,47	0/1:3,0:3:8.30:58,0,8	0/0:7,0:7:14.23:0,14,185	0/0:2,0:2:6.01:0,6,75	0/0:3,0:3:9.01:0,9,104
chr10	19047796	.	T	TAC	23828.09	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-6.792;DP=774;FS=3.159;HRun=0;HaplotypeScore=89.6343;InbreedingCoeff=0.9470;MQ=66.67;MQ0=8;MQRankSum=-4.435;QD=34.48;ReadPosRankSum=6.720;VQSLOD=7.0941;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,39:48:72.65:1428,73,0	1/1:0,14:14:39.13:648,39,0	0/0:38,0:22:44.72:0,45,525	0/0:45,0:30:57.11:0,57,667	1/1:0,25:25:63.22:1047,63,0	1/1:0,14:14:33.11:548,33,0	1/1:3,30:33:69.24:1147,69,0	1/1:11,31:42:93.25:1473,93,0	1/1:5,26:31:63.22:1047,63,0	1/1:1,23:26:75.23:1190,75,0	1/1:2,6:8:18.06:293,18,0	1/1:4,33:38:78.27:1296,78,0	1/1:6,21:26:32.58:825,33,0	1/1:5,31:36:75.26:1235,75,0	1/1:3,36:40:96.33:1595,96,0	1/1:5,22:28:54.17:898,54,0	1/1:3,23:26:54.18:897,54,0	1/1:3,13:16:27.98:451,28,0	1/1:7,14:19:39.60:644,40,0	1/1:4,19:24:7.30:660,7,0	1/1:17,25:44:75.25:1224,75,0	1/1:2,13:15:33.11:548,33,0	1/1:1,21:22:47.97:785,48,0	1/1:6,24:30:57.19:947,57,0	1/1:3,15:18:39.13:648,39,0	1/1:3,30:33:87.28:1407,87,0	1/1:1,18:19:42.14:698,42,0	1/1:2,9:11:15.05:249,15,0
chr10	19049416	.	C	CT	8358.48	PASS	AB=0.700;AC=47;AF=0.839;AN=56;BaseQRankSum=-3.354;DP=433;FS=8.920;HRun=9;HaplotypeScore=71.9495;InbreedingCoeff=0.7142;MQ=69.44;MQ0=0;MQRankSum=-4.104;QD=22.23;ReadPosRankSum=0.584;VQSLOD=5.3946;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:44.98:0,45,390	1/1:5,2:6:15.02:154,15,0	0/0:18,0:16:23.92:0,24,200	0/0:10,0:8:11.29:0,11,101	1/1:15,11:26:63.08:665,63,0	1/1:14,11:24:66.18:728,66,0	1/1:6,7:13:1.06:235,1,0	1/1:11,20:32:68.92:705,69,0	0/0:7,0:7:20.99:0,21,181	1/1:9,12:20:57.15:629,57,0	1/1:14,6:20:16.06:392,16,0	1/1:13,1:14:4.04:272,4,0	1/1:7,5:12:21:206,21,0	1/1:3,3:6:18.05:197,18,0	1/1:7,5:10:21.04:222,21,0	1/1:10,4:14:27.03:282,27,0	1/1:18,6:23:54.13:585,54,0	1/1:13,6:19:19.05:427,19,0	1/1:11,4:15:4.01:265,4,0	1/1:18,6:24:25.07:493,25,0	1/1:1,5:6:14.99:152,15,0	1/1:3,4:7:15.04:162,15,0	1/1:4,5:9:18.05:197,18,0	1/1:2,1:3:6.02:65,6,0	0/1:8,6:14:8:146,0,8	1/1:12,10:22:53.96:568,54,0	1/1:15,10:24:45.09:479,45,0	1/1:4,0:4:12.03:133,12,0
chr10	19049429	.	GT	G	6736.60	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-4.045;DP=366;FS=1.861;HRun=8;HaplotypeScore=68.0012;InbreedingCoeff=0.8909;MQ=57.32;MQ0=3;MQRankSum=-2.700;QD=20.92;ReadPosRankSum=-0.975;VQSLOD=4.7493;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:21.05:0,21,190	1/1:3,5:7:21.03:202,21,0	0/0:15,0:11:15.04:0,15,170	0/0:7,0:5:10.76:0,11,95	1/1:14,10:24:60.09:573,60,0	1/1:16,6:21:48.06:461,48,0	1/1:4,7:11:27.01:245,27,0	1/1:10,19:27:54.07:520,54,0	0/0:6,0:6:11.61:0,12,65	1/1:13,6:18:36.05:346,36,0	1/1:8,8:16:39.05:371,39,0	1/1:8,3:11:30.05:288,30,0	1/1:2,7:9:18.02:171,18,0	1/1:4,3:7:18.03:172,18,0	1/1:4,5:7:21.02:196,21,0	1/1:6,3:9:24.02:226,24,0	1/1:19,2:18:39.05:373,39,0	1/1:12,7:17:36.05:344,36,0	1/1:5,1:6:9.01:87,9,0	1/1:11,11:22:48.07:460,48,0	1/1:4,1:5:8.98:74,9,0	1/1:1,5:6:15.01:140,15,0	1/1:3,5:8:12.01:114,12,0	1/1:1,1:2:6.01:56,6,0	1/1:4,9:13:30.04:288,30,0	1/1:11,9:18:42.06:404,42,0	1/1:10,11:19:51.05:482,51,0	1/1:4,1:5:15.02:145,15,0
chr10	19050060	.	TCAC	T	17946.44	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=2.324;DP=814;FS=4.226;HRun=0;HaplotypeScore=167.7111;InbreedingCoeff=0.8437;MQ=66.69;MQ0=5;MQRankSum=1.714;QD=23.55;ReadPosRankSum=2.418;VQSLOD=4.3740;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:21,20:41:75.23:1020,75,0	1/1:6,6:12:24.08:328,24,0	0/0:21,0:15:5.62:0,6,27	0/0:31,0:23:4.41:0,4,68	1/1:4,13:17:36.07:466,36,0	1/1:6,13:19:36.12:499,36,0	1/1:11,23:35:63.18:854,63,0	1/1:28,8:35:18.05:231,18,0	1/1:8,21:28:57.19:789,57,0	1/1:15,12:26:48.16:661,48,0	1/1:3,8:11:24.08:333,24,0	1/1:9,22:31:63.21:874,63,0	1/1:7,19:25:45.15:624,45,0	1/1:10,22:32:66.22:915,66,0	1/1:8,32:40:78.26:1081,78,0	1/1:13,23:36:44.85:623,45,0	1/1:8,31:39:75.25:1041,75,0	1/1:12,30:41:84.28:1166,84,0	1/1:12,9:21:30.06:374,30,0	1/1:6,7:13:21.03:269,21,0	1/1:29,55:84:99:1541,111,0	1/1:9,10:20:30.07:391,30,0	1/1:9,7:16:27.08:358,27,0	1/1:11,37:48:95.94:1327,96,0	1/1:11,15:24:42.14:573,42,0	1/1:11,13:24:42.09:528,42,0	1/1:4,21:25:54.18:749,54,0	1/1:3,9:12:24.08:333,24,0
chr10	19050680	.	AT	A	12048.77	PASS	AB=0.704;AC=51;AF=0.911;AN=56;BaseQRankSum=-5.747;DP=685;FS=3.463;HRun=11;HaplotypeScore=75.2465;InbreedingCoeff=0.3806;MQ=63.53;MQ0=0;MQRankSum=-1.063;QD=18.09;ReadPosRankSum=4.717;VQSLOD=5.8204;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,32:38:80.33:709,80,0	1/1:3,9:12:26.96:222,27,0	0/1:19,2:14:12.85:13,0,276	0/0:19,0:17:35.82:0,36,327	1/1:6,18:24:52.94:424,53,0	1/1:4,25:29:71.91:591,72,0	1/1:2,17:19:41.95:345,42,0	1/1:6,30:36:89.87:739,90,0	1/1:2,15:17:44.94:369,45,0	1/1:1,19:20:53.91:440,54,0	1/1:4,13:17:32.90:271,33,0	1/1:1,24:25:59.93:493,60,0	0/1:3,10:13:5.02:170,0,5	1/1:4,15:20:17.99:343,18,0	1/1:4,23:27:62.70:517,63,0	1/1:6,24:30:68.89:566,69,0	1/1:8,32:41:68.65:755,69,0	1/1:5,27:33:82.92:671,83,0	0/1:8,11:18:17.57:210,0,18	1/1:3,24:28:47.31:502,47,0	1/1:3,8:11:17.14:146,17,0	1/1:3,13:16:40.98:326,41,0	1/1:5,22:27:27.68:436,28,0	1/1:3,23:26:56.93:468,57,0	1/1:5,32:38:99:819,101,0	1/1:6,27:33:80.88:665,81,0	1/1:6,26:31:74.87:616,75,0	1/1:4,10:14:26.96:222,27,0
chr10	19054740	.	CAA	C	8864.72	PASS	AB=0.565;AC=47;AF=0.839;AN=56;BaseQRankSum=-10.228;DP=498;FS=11.165;HRun=12;HaplotypeScore=112.5544;InbreedingCoeff=0.8437;MQ=84.83;MQ0=2;MQRankSum=-3.223;QD=21.21;ReadPosRankSum=2.389;VQSLOD=3.0764;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:2,0:18:40.81:0,41,143	1/1:2,5:9:20.52:176,21,0	0/0:28,0:21:18.98:0,19,242	0/0:18,0:16:20.26:0,20,190	1/1:6,17:23:45.07:456,45,0	1/1:1,19:22:47.41:521,47,0	1/1:0,11:11:24.05:244,24,0	1/1:7,23:31:62.78:674,63,0	0/0:4,0:16:29.39:0,29,137	1/1:4,19:23:54.08:549,54,0	1/1:6,17:23:42:427,42,0	1/1:2,8:11:17.74:235,18,0	1/1:2,11:14:35.81:347,36,0	1/1:2,6:8:18.03:183,18,0	1/1:2,16:19:29.80:356,30,0	1/1:5,14:20:35.78:347,36,0	1/1:1,20:21:48.10:488,48,0	1/1:1,11:12:24.05:244,24,0	1/1:2,8:12:20.65:228,21,0	1/1:3,33:36:93.17:943,93,0	1/1:1,2:3:6.01:61,6,0	0/1:3,10:13:3.51:163,0,4	1/1:6,23:29:59.79:608,60,0	1/1:0,4:4:9.02:92,9,0	1/1:5,14:20:38.79:378,39,0	1/1:3,19:22:57.11:580,57,0	1/1:10,18:29:41.66:471,42,0	1/1:0,3:3:9.02:92,9,0
chr10	19056246	.	TATCATCATCATCATCATC	T	8423.16	PASS	AB=0.653;AC=40;AF=0.714;AN=56;BaseQRankSum=9.869;DP=608;FS=4.252;HRun=0;HaplotypeScore=295.6580;InbreedingCoeff=0.1965;MQ=58.77;MQ0=4;MQRankSum=-8.804;QD=16.42;ReadPosRankSum=-0.588;VQSLOD=3.2659;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:78.22:0,78,5278	0/1:5,0:14:14.67:15,0,34	0/0:17,0:15:6.02:0,6,141	0/0:13,0:11:3.01:0,3,35	0/1:13,0:27:12.47:12,0,210	1/1:13,12:24:18.06:869,18,0	1/1:8,5:13:3.01:143,3,0	1/1:35,0:34:9:81,9,0	0/0:26,0:26:42.13:0,42,3283	0/1:16,0:28:3.01:3,0,431	0/1:7,0:15:11.57:12,0,13	1/1:8,13:21:21.07:1008,21,0	0/1:17,0:26:8.38:8,0,57	0/1:8,0:26:37.04:37,0,57	1/1:6,14:20:24.55:1159,25,0	1/1:8,0:18:21.07:459,21,0	1/1:13,0:18:12.04:249,12,0	1/1:14,0:25:1.07:382,1,0	1/1:10,5:15:12.10:224,12,0	1/1:10,12:22:26.92:839,27,0	1/1:21,4:25:3.01:143,3,0	1/1:13,8:21:9.03:434,9,0	1/1:5,9:14:18.06:839,18,0	1/1:16,9:25:6.02:289,6,0	1/1:11,13:24:24.08:1158,24,0	0/1:9,0:22:21.42:21,0,146	0/1:12,0:26:26.39:26,0,73	1/1:4,0:6:3.85:11,4,0
chr10	19056787	.	G	GAGGT	4451.47	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=0.669;DP=783;FS=2.242;HRun=0;HaplotypeScore=129.0517;InbreedingCoeff=0.9981;MQ=85.12;MQ0=0;MQRankSum=-7.010;QD=54.96;ReadPosRankSum=0.448;VQSLOD=5.6809;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,24:43:90.26:2096,90,0	0/0:8,0:8:24.08:0,24,436	0/0:25,0:25:63.21:0,63,1087	0/0:24,0:24:57.16:0,57,974	0/0:22,0:22:66.23:0,66,1200	0/0:28,0:28:75.24:0,75,1321	0/0:34,0:34:87.30:0,87,1573	0/0:28,0:28:75.24:0,75,1284	1/1:8,30:38:93.32:2355,93,0	0/0:21,0:21:60.20:0,60,1064	0/0:13,0:13:36.11:0,36,616	0/0:34,0:34:99:0,99,1775	0/0:30,0:30:90.26:0,90,1519	0/0:35,0:35:93.32:0,93,1690	0/0:44,0:44:99:0,129,2285	0/0:29,0:29:87.30:0,87,1573	0/0:35,0:35:99:0,99,1717	0/0:37,0:37:76.96:0,77,1709	0/0:21,0:21:57.19:0,57,998	0/0:12,0:12:27.08:0,27,461	0/0:65,0:65:99:0,169,2961	0/0:20,0:20:57.18:0,57,996	0/0:18,0:18:48.16:0,48,843	0/0:37,0:37:99:0,99,1767	0/0:25,0:25:66.23:0,66,1200	0/0:24,0:24:60.21:0,60,1090	0/0:23,0:23:69.24:0,69,1245	0/0:10,0:10:30.10:0,30,543
chr10	19056876	.	T	TC	2362.63	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-7.501;DP=668;FS=9.736;HRun=4;HaplotypeScore=65.4233;InbreedingCoeff=0.9771;MQ=80.33;MQ0=0;MQRankSum=-4.988;QD=28.81;ReadPosRankSum=0.484;VQSLOD=3.1625;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,48:52:99:1429,105,0	0/0:11,0:11:33.09:0,33,374	0/0:17,0:17:44.77:0,45,475	0/0:17,0:17:38.27:0,38,383	0/0:17,0:17:45.13:0,45,508	0/0:26,0:26:75.20:0,75,839	0/0:24,0:24:66.15:0,66,734	0/0:20,0:20:51.14:0,51,578	1/1:7,23:30:81.22:1056,81,0	0/0:18,0:18:48.14:0,48,543	0/0:8,0:8:18.05:0,18,204	0/0:33,0:33:99:0,99,1118	0/0:35,0:35:99:0,105,1190	0/0:21,0:21:51.14:0,51,577	0/0:26,0:26:69.20:0,69,782	0/0:16,0:16:45.13:0,45,510	0/0:42,0:42:99:0,123,1342	0/0:24,0:24:66.15:0,66,734	0/0:18,0:18:45.13:0,45,510	0/0:8,0:8:21.04:0,21,228	0/0:84,0:83:99:0,235,2636	0/0:11,0:11:27.08:0,27,306	0/0:5,0:5:15.04:0,15,170	0/0:39,0:39:99:0,105,1189	0/0:25,0:25:60.17:0,60,681	0/0:14,0:14:39.10:0,39,433	0/0:19,0:19:54.15:0,54,612	0/0:8,0:8:15.04:0,15,170
chr10	19057253	.	CTG	C	1821.25	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=10.387;DP=677;FS=24.692;HRun=0;HaplotypeScore=86.8944;InbreedingCoeff=0.9418;MQ=86.13;MQ0=0;MQRankSum=-5.271;QD=31.40;ReadPosRankSum=2.223;VQSLOD=3.0597;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,38:38:86.98:1191,87,0	0/0:8,0:8:24.06:0,24,427	0/0:33,0:33:92.67:0,93,1605	0/0:24,0:22:66.21:0,66,1148	0/0:15,0:15:39.13:0,39,730	0/0:31,0:31:93.32:0,93,1787	0/0:35,0:35:99:0,102,1938	0/0:33,0:33:96.32:0,96,1801	1/1:0,20:20:51.11:751,51,0	0/0:21,0:21:60.19:0,60,1124	0/0:4,0:4:12.04:0,12,231	0/0:42,0:42:99:0,126,2358	0/0:36,0:36:99:0,105,1975	0/0:24,0:24:72.23:0,72,1346	0/0:33,0:33:99:0,99,1825	0/0:22,0:22:66.20:0,66,1187	0/0:30,0:30:90.24:0,90,1591	0/0:26,0:26:72.18:0,72,1316	0/0:26,0:26:75.26:0,75,1427	0/0:5,0:5:15.05:0,15,289	0/0:44,0:44:99:0,129,2421	0/0:6,0:6:18.06:0,18,347	0/0:7,0:7:21.07:0,21,405	0/0:41,0:41:99:0,123,2330	0/0:14,0:14:42.14:0,42,797	0/0:24,0:24:69.19:0,69,1286	0/0:32,0:32:93.20:0,93,1651	0/0:3,0:3:9.03:0,9,174
chr10	19057468	.	A	AAC	748.09	PASS	AB=1.000;AC=19;AF=0.365;AN=52;BaseQRankSum=2.830;DP=364;FS=0.000;HRun=0;HaplotypeScore=60.3940;InbreedingCoeff=0.5906;MQ=68.36;MQ0=14;MQRankSum=-0.704;QD=5.71;ReadPosRankSum=0.737;VQSLOD=2.4830;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:8.56:0,9,38	1/1:4,0:3:5.75:50,6,0	0/0:36,0:16:7.90:0,8,47	0/1:33,0:15:0:0,0,0	./.	0/0:8,0:8:11.40:0,11,109	0/0:21,0:21:30.09:0,30,339	0/0:15,0:14:5.14:0,5,101	0/0:15,0:15:10.36:0,10,47	1/1:12,0:10:6.02:84,6,0	./.	0/0:13,0:13:17.85:0,18,189	0/1:12,0:11:21.10:102,0,21	1/1:12,0:12:18.53:224,19,0	0/0:18,0:18:23.86:0,24,250	0/1:12,0:12:29.99:52,0,30	1/1:13,0:13:11.21:106,11,0	1/1:2,5:7:6.02:93,6,0	0/0:7,0:5:9.03:0,9,102	0/0:9,0:9:10.61:0,11,83	0/0:20,0:19:18.05:0,18,200	0/0:9,0:9:7.59:0,8,100	0/0:7,0:7:9.02:0,9,102	0/0:23,0:23:32.29:0,32,338	0/0:11,0:11:20.22:0,20,179	1/1:15,0:13:12.04:160,12,0	1/1:9,0:9:3.01:38,3,0	1/1:2,0:1:2.60:10,3,0
chr10	19057490	.	CACA	C	283.36	PASS	AB=1.000;AC=5;AF=0.096;AN=52;BaseQRankSum=-0.410;DP=309;FS=12.823;HRun=0;HaplotypeScore=40.9470;InbreedingCoeff=0.5887;MQ=39.74;MQ0=59;MQRankSum=-4.455;QD=9.14;ReadPosRankSum=-1.384;VQSLOD=0.7875;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,5:7:12.04:213,12,0	0/0:4,0:3:8.99:0,9,126	0/0:35,0:4:11.23:0,11,140	0/0:42,0:5:12.04:0,12,217	./.	0/0:8,0:6:9.91:0,10,215	0/0:13,0:12:33.10:0,33,684	0/0:13,0:8:13.02:0,13,290	1/1:0,12:12:11.99:178,12,0	0/0:9,0:5:12.51:0,13,196	./.	0/0:11,0:10:18.06:0,18,337	0/0:8,0:7:12.04:0,12,212	0/0:10,0:9:19:0,19,325	0/0:12,0:12:21.73:0,22,501	0/0:7,0:7:9.65:0,10,205	0/0:8,0:7:15.05:0,15,309	0/0:7,0:6:9.03:0,9,167	0/1:12,0:7:1.12:1,0,191	0/0:6,0:6:11.70:0,12,160	0/0:21,0:15:21.07:0,21,439	0/0:7,0:7:12.48:0,12,228	0/0:6,0:6:12.04:0,12,266	0/0:15,0:15:32.90:0,33,714	0/0:11,0:11:23.70:0,24,400	0/0:11,0:8:27.05:0,27,437	0/0:6,0:5:6.43:0,6,146	0/0:2,0:1:3.01:0,3,66
chr10	19057495	.	AC	A	556.59	PASS	AB=0.839;AC=15;AF=0.278;AN=54;BaseQRankSum=1.701;DP=377;FS=0.000;HRun=2;HaplotypeScore=39.0221;InbreedingCoeff=0.3248;MQ=35.19;MQ0=79;MQRankSum=-0.962;QD=5.92;ReadPosRankSum=-0.131;VQSLOD=0.3577;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:7.60:0,8,34	1/1:6,1:4:3.51:47,4,0	0/0:33,0:3:7.82:0,8,46	./.	0/0:6,0:5:0:0,0,0	0/0:10,0:7:11.43:0,11,109	0/0:28,0:15:33.09:0,33,385	0/0:15,0:10:12.22:0,12,119	0/0:13,0:12:11.18:0,11,64	0/1:9,3:4:26.04:55,0,26	1/1:4,0:4:0.47:1,0,0	0/0:14,0:12:21.23:0,21,202	0/1:6,6:10:21.10:102,0,21	1/1:9,6:12:18.32:224,18,0	0/0:13,0:13:22.69:0,23,244	0/1:8,1:8:31.86:50,0,32	0/1:14,1:10:25.02:46,0,25	0/0:9,0:8:6.08:0,6,54	0/0:13,0:7:9.03:0,9,113	0/0:6,0:6:10.76:0,11,94	0/0:31,0:18:17.84:0,18,210	0/0:10,0:10:10.11:0,10,123	0/0:4,0:4:8.57:0,9,101	0/0:19,0:17:32.47:0,32,402	0/0:12,0:12:18.41:0,18,176	1/1:4,6:8:12.04:145,12,0	0/1:7,1:4:12.33:31,0,12	1/1:2,0:1:2.60:10,3,0
chr10	19057808	.	TCACCATCACCATCACCATCACCAC	T	4803.28	PASS	AB=1.000;AC=39;AF=0.722;AN=54;BaseQRankSum=-2.784;DP=794;FS=0.801;HRun=0;HaplotypeScore=166.5465;InbreedingCoeff=-0.0266;MQ=29.47;MQ0=210;MQRankSum=1.258;QD=7.32;ReadPosRankSum=-0.424;VQSLOD=3.8835;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:4:8.79:52,9,0	0/1:17,0:9:8.98:44,0,9	./.	0/0:6,0:3:9.03:0,9,150	1/1:19,0:8:10.59:145,11,0	1/1:19,0:8:11.97:169,12,0	1/1:39,0:17:11.97:415,12,0	1/1:35,17:23:30.13:723,30,0	1/1:5,0:2:5.87:35,6,0	0/1:28,0:12:99:103,0,147	0/1:8,0:7:24.59:32,0,25	1/1:39,0:26:3.88:52,4,0	0/1:29,0:17:99:246,0,157	0/1:30,0:21:41.05:45,0,41	1/1:38,0:19:2.96:585,3,0	0/1:38,0:21:3.29:442,0,3	0/1:37,0:18:10.32:54,0,10	1/1:22,0:14:0.88:35,1,0	1/1:31,9:15:22.28:340,22,0	0/1:21,0:12:22.16:120,0,22	0/0:113,0:43:6.11:0,6,19	0/1:13,0:8:11.94:27,0,12	0/0:8,9:10:0.47:0,0,1	1/1:42,0:25:23.89:399,24,0	1/1:22,0:9:3.01:34,3,0	1/1:25,22:27:14.73:474,15,0	1/1:18,0:8:9.03:139,9,0	1/1:7,0:4:6.49:93,6,0
chr10	19057832	.	C	CCACCAT	9121.24	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=2.204;DP=757;FS=1.474;HRun=0;HaplotypeScore=125.2317;InbreedingCoeff=0.6445;MQ=43.49;MQ0=84;MQRankSum=-3.348;QD=13.34;ReadPosRankSum=1.754;VQSLOD=3.9841;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:17:19.20:0,19,138	1/1:5,7:10:3.01:36,3,0	0/0:18,0:11:30.01:0,30,425	0/0:25,0:17:47.62:0,48,716	1/1:13,0:7:11.18:307,11,0	1/1:16,0:13:24:409,24,0	1/1:45,0:33:72.11:956,72,0	1/1:29,0:18:49.90:636,50,0	0/0:6,0:4:2.92:0,3,17	1/1:25,0:18:24.01:283,24,0	1/1:0,7:7:6.02:102,6,0	1/1:13,27:38:6.02:161,6,0	1/1:34,0:26:37.48:665,37,0	1/1:11,17:31:7.38:133,7,0	1/1:41,0:27:60.08:992,60,0	1/1:35,4:32:60.67:1219,61,0	1/1:15,24:30:5.87:133,6,0	1/1:10,14:18:3.01:74,3,0	1/1:21,0:10:24.05:332,24,0	1/1:10,9:13:23.88:284,24,0	1/1:34,44:54:3.01:41,3,0	1/1:5,10:12:3.01:34,3,0	1/1:14,0:9:0.47:1,0,0	1/1:45,0:31:54.13:902,54,0	1/1:4,10:12:3.48:35,3,0	1/1:30,0:22:38.73:505,39,0	1/1:19,0:16:36.08:565,36,0	1/1:13,0:13:35.87:316,36,0
chr10	19058627	.	CAA	C	2717.88	PASS	AB=0.705;AC=29;AF=0.518;AN=56;BaseQRankSum=-6.773;DP=470;FS=0.935;HRun=15;HaplotypeScore=74.6728;InbreedingCoeff=0.4381;MQ=53.74;MQ0=10;MQRankSum=1.723;QD=7.70;ReadPosRankSum=1.605;VQSLOD=0.7904;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:6:0:0,0,0	0/1:5,1:12:4.93:5,0,98	0/0:6,0:3:5.97:0,6,48	0/0:4,0:3:4.66:0,5,56	0/1:8,2:15:23.98:41,0,24	1/1:6,11:18:17.78:201,18,0	1/1:8,6:15:20.13:173,20,0	1/1:10,15:26:38:299,38,0	0/0:4,0:4:7.72:0,8,46	0/0:7,1:20:17.97:0,18,172	0/1:7,1:15:10:10,0,29	1/1:8,11:22:26.41:208,26,0	0/0:11,1:16:0.95:0,1,114	0/1:13,1:15:30.15:30,0,54	1/1:6,15:21:23.59:241,24,0	0/0:7,0:12:10.97:0,11,78	0/1:19,1:29:1.18:1,0,183	0/0:7,1:12:5.52:0,6,59	0/1:10,6:19:0.83:147,0,1	1/1:10,13:23:33.79:287,34,0	1/1:4,9:12:20.94:185,21,0	1/1:6,9:18:16.99:228,17,0	1/1:8,9:18:7.40:152,7,0	1/1:6,15:21:32.64:289,33,0	1/1:8,12:23:35.46:377,35,0	0/0:10,2:20:9.86:0,10,138	0/1:12,2:21:29.59:30,0,106	0/0:9,0:11:22:0,22,154
chr10	19058715	.	T	TA	715.82	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-3.834;DP=581;FS=7.615;HRun=9;HaplotypeScore=65.0325;InbreedingCoeff=0.9932;MQ=76.54;MQ0=0;MQRankSum=-0.987;QD=23.86;ReadPosRankSum=0.636;VQSLOD=4.4457;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,17:18:19.07:438,19,0	0/0:10,0:10:26.99:0,27,234	0/0:16,0:16:35.93:0,36,303	0/0:9,0:9:20.93:0,21,169	0/0:26,0:26:74.97:0,75,647	0/0:35,1:36:44.79:0,45,618	0/0:21,0:21:53.97:0,54,466	0/0:21,0:21:59.96:0,60,515	1/1:0,12:12:36.10:398,36,0	0/0:21,0:21:50.98:0,51,443	0/0:23,0:23:53.95:0,54,465	0/0:25,0:25:62.89:0,63,531	0/0:13,0:13:38.99:0,39,339	0/0:20,0:20:56.93:0,57,484	0/0:21,0:20:53.94:0,54,460	0/0:12,0:12:29.98:0,30,256	0/0:33,0:34:75.89:0,76,677	0/0:22,0:21:56.30:0,56,465	0/0:15,0:15:29.94:0,30,256	0/0:32,0:32:77.95:0,78,673	0/0:29,0:29:77.98:0,78,677	0/0:16,0:16:35.97:0,36,309	0/0:16,0:16:38.98:0,39,336	0/0:23,0:23:44.99:0,45,391	0/0:26,0:26:54.11:0,54,581	0/0:19,0:19:44.97:0,45,388	0/0:21,0:21:56.97:0,57,491	0/0:24,0:24:65.96:0,66,568
chr10	19059365	.	G	GT	862.49	PASS	AB=0.908;AC=8;AF=0.143;AN=56;BaseQRankSum=-1.353;DP=492;FS=1.371;HRun=11;HaplotypeScore=56.1387;InbreedingCoeff=0.4023;MQ=72.11;MQ0=1;MQRankSum=0.259;QD=8.80;ReadPosRankSum=-0.816;VQSLOD=2.0233;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,23:30:30.80:472,31,0	0/1:8,1:9:15.60:16,0,74	0/1:12,0:12:12.53:38,0,13	0/0:9,0:8:9.04:0,9,54	0/0:20,0:20:44.78:0,45,348	0/0:17,0:18:36.84:0,37,263	0/0:20,1:22:28.91:0,29,351	0/0:21,1:22:41.76:0,42,323	1/1:11,10:21:27:411,27,0	0/0:18,0:18:35.82:0,36,277	0/1:10,2:12:31.01:31,0,156	0/0:18,0:18:14.04:0,14,249	0/0:21,0:21:44.79:0,45,348	0/0:21,0:21:44.74:0,45,348	0/0:17,0:17:32.82:0,33,255	0/1:12,2:14:41.77:42,0,94	0/0:25,9:34:10.80:0,11,444	0/0:14,0:14:17.84:0,18,139	0/0:17,0:16:35.80:0,36,273	0/0:13,0:13:32.85:0,33,255	0/0:24,0:24:41.55:0,42,324	0/0:12,0:13:31.90:0,32,237	0/0:14,0:14:38.83:0,39,302	0/0:20,0:20:38.74:0,39,300	0/0:8,0:8:14.90:0,15,116	0/0:19,1:22:15.41:0,15,283	0/0:22,0:22:29.79:0,30,371	0/0:6,0:6:17.93:0,18,139
chr10	19059736	.	CGAAT	C	11562.95	PASS	AB=0.684;AC=51;AF=0.911;AN=56;BaseQRankSum=-2.350;DP=677;FS=2.100;HRun=0;HaplotypeScore=137.8624;InbreedingCoeff=0.5173;MQ=71.49;MQ0=3;MQRankSum=2.425;QD=17.95;ReadPosRankSum=1.635;VQSLOD=4.9053;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:21:12.01:112,12,0	1/1:6,5:11:12.04:188,12,0	0/0:22,0:22:2.97:0,3,20	0/0:11,0:9:3.01:0,3,40	1/1:17,16:33:30.10:470,30,0	1/1:15,21:36:51.17:800,51,0	1/1:11,8:19:9.03:141,9,0	1/1:28,0:27:6.02:92,6,0	1/1:18,0:18:32.95:294,33,0	1/1:15,18:33:54.15:801,54,0	1/1:11,10:21:18.06:282,18,0	1/1:8,20:28:33.11:517,33,0	1/1:9,18:27:33.11:516,33,0	1/1:8,15:23:33.11:517,33,0	1/1:7,13:20:33.11:517,33,0	1/1:13,0:27:30.02:271,30,0	1/1:3,0:10:17.97:154,18,0	0/1:7,0:13:15.75:22,0,16	1/1:23,11:34:33.09:489,33,0	1/1:8,21:28:45.15:696,45,0	1/1:9,13:22:24.08:376,24,0	1/1:11,23:34:57.19:894,57,0	1/1:9,19:28:41.48:657,41,0	1/1:16,18:33:39.13:611,39,0	1/1:7,14:22:33.11:498,33,0	1/1:14,18:32:54.11:752,54,0	1/1:11,15:26:30.10:470,30,0	1/1:1,14:15:27.09:423,27,0
chr10	19059769	.	GAATGAA	G	807.66	PASS	AB=0.904;AC=5;AF=0.089;AN=56;BaseQRankSum=9.062;DP=651;FS=1.432;HRun=0;HaplotypeScore=178.6508;InbreedingCoeff=-0.0967;MQ=60.48;MQ0=5;MQRankSum=-8.967;QD=8.97;ReadPosRankSum=3.485;VQSLOD=2.8565;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:18,6:24:99:118,0,351	0/0:8,0:8:20.36:0,20,237	0/0:14,0:11:33.10:0,33,492	0/0:7,0:7:18.06:0,18,321	0/0:33,0:33:96.45:0,96,1271	0/0:30,0:30:72.37:0,72,621	0/0:18,0:18:38.62:0,39,491	0/0:34,0:32:95.91:0,96,1452	0/1:14,9:23:99:400,0,189	0/0:36,0:36:99:0,103,1072	0/0:19,0:19:53.17:0,53,728	0/0:34,0:34:70.02:0,70,734	0/0:26,0:26:52.35:0,52,486	0/0:29,0:29:72.20:0,72,798	0/0:20,0:20:52.23:0,52,476	0/1:19,0:19:99:258,0,174	0/1:12,0:12:99:138,0,186	0/1:12,0:12:10.18:10,0,273	0/0:19,0:19:55.54:0,56,508	0/0:30,0:29:84.90:0,85,881	0/0:26,0:26:58.85:0,59,639	0/0:30,0:30:84.08:0,84,764	0/0:24,0:24:59.08:0,59,476	0/0:24,0:23:54.37:0,54,458	0/0:26,0:26:33.21:0,33,625	0/0:28,0:28:81.97:0,82,800	0/0:25,0:26:58.48:0,58,622	0/0:19,0:19:40.57:0,41,344
chr10	19059944	.	A	AAG	28181.33	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-8.796;DP=725;FS=1.317;HRun=0;HaplotypeScore=66.2889;InbreedingCoeff=0.9892;MQ=85.80;MQ0=2;MQRankSum=-9.802;QD=41.50;ReadPosRankSum=6.544;VQSLOD=6.7397;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,41:46:99:1890,108,0	1/1:0,6:6:14.85:263,15,0	0/0:22,0:22:50.74:0,51,630	0/0:24,0:24:63.21:0,63,837	1/1:2,17:19:45.15:787,45,0	1/1:1,33:34:78.27:1368,78,0	1/1:3,30:33:84.29:1468,84,0	1/1:11,40:51:99:1973,120,0	1/1:4,17:21:45.15:771,45,0	1/1:6,30:38:93.32:1612,93,0	1/1:3,11:14:33.11:561,33,0	1/1:3,33:36:90.31:1578,90,0	1/1:1,33:35:75.25:1309,75,0	1/1:5,21:25:54.19:947,54,0	1/1:1,33:34:87.30:1526,87,0	1/1:0,17:17:36.12:631,36,0	1/1:1,24:25:60.21:1051,60,0	1/1:4,10:14:24.08:420,24,0	1/1:2,27:29:78.26:1309,78,0	1/1:2,21:23:60.21:1051,60,0	1/1:2,22:24:51.17:894,51,0	1/1:1,23:25:69.24:1202,69,0	1/1:3,18:21:48.16:841,48,0	1/1:3,17:22:48.16:816,48,0	1/1:2,27:29:69.24:1210,69,0	1/1:1,24:25:69.21:1181,69,0	1/1:1,22:23:63.22:1102,63,0	1/1:0,8:8:24.08:421,24,0
chr10	19060069	.	CAG	C	2667.15	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=11.897;DP=766;FS=5.381;HRun=0;HaplotypeScore=93.9794;InbreedingCoeff=0.9998;MQ=83.75;MQ0=0;MQRankSum=-1.140;QD=37.04;ReadPosRankSum=3.240;VQSLOD=5.8182;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,50:50:99:2054,135,0	0/0:14,0:14:42.14:0,42,804	0/0:24,0:24:43.44:0,43,1176	0/0:23,0:23:66.08:0,66,1105	0/0:34,0:34:99:0,102,1878	0/0:24,0:24:72.23:0,72,1323	0/0:26,0:26:78.24:0,78,1418	0/0:35,0:35:99:0,105,1898	1/1:0,22:22:48.16:734,48,0	0/0:29,0:29:87.29:0,87,1593	0/0:21,0:21:63.22:0,63,1205	0/0:39,0:39:99:0,117,2159	0/0:32,0:32:90.31:0,90,1721	0/0:34,0:34:99:0,102,1909	0/0:35,0:34:99:0,102,1834	0/0:20,0:20:60.21:0,60,1137	0/0:25,0:25:75.26:0,75,1435	0/0:11,0:11:33.11:0,33,630	0/0:19,0:19:57.15:0,57,1016	0/0:39,0:39:99:0,117,2165	0/0:30,0:30:87.30:0,87,1652	0/0:27,0:27:81.25:0,81,1464	0/0:30,0:30:87.30:0,87,1638	0/0:19,0:19:54.17:0,54,1001	0/0:27,0:27:81.26:0,81,1518	0/0:31,0:31:91.55:0,92,1687	0/0:29,0:29:84.27:0,84,1554	0/0:17,0:17:51.17:0,51,976
chr10	19061078	.	GA	G	3504.25	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=4.012;DP=699;FS=0.806;HRun=5;HaplotypeScore=78.2627;InbreedingCoeff=0.9989;MQ=79.99;MQ0=0;MQRankSum=-2.690;QD=29.70;ReadPosRankSum=3.259;VQSLOD=4.1765;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,26:28:72.21:817,72,0	0/0:8,0:8:21.07:0,21,287	0/0:28,0:28:54.30:0,54,776	0/0:13,0:13:33.11:0,33,437	0/0:32,0:32:93.31:0,93,1271	0/0:28,0:28:81.27:0,81,1108	0/0:23,0:23:60.19:0,60,807	0/0:39,0:39:99:0,102,1368	1/1:0,21:21:57.16:647,57,0	0/0:31,0:31:87.29:0,87,1189	0/0:22,0:22:60.18:0,60,788	0/0:23,0:23:66.22:0,66,903	0/0:38,0:38:99:0,111,1499	0/0:28,0:28:78.26:0,78,1061	0/0:30,0:30:87.28:0,87,1173	1/1:0,20:20:51.15:578,51,0	1/1:2,33:35:90.26:1021,90,0	1/1:1,13:14:39.11:442,39,0	0/0:15,0:15:42.12:0,42,556	0/0:31,0:31:90.30:0,90,1230	0/0:22,0:22:63.19:0,63,844	0/0:27,0:27:75.25:0,75,1026	0/0:18,0:18:51.17:0,51,697	0/0:12,0:12:33.11:0,33,451	0/0:29,0:29:81.26:0,81,1095	0/0:32,0:32:87.28:0,87,1173	0/0:32,0:32:87.29:0,87,1188	0/0:20,0:20:60.17:0,60,801
chr10	19061998	.	TA	T	1973.85	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.478;DP=602;FS=2.527;HRun=1;HaplotypeScore=62.3405;InbreedingCoeff=0.9910;MQ=76.36;MQ0=0;MQRankSum=-2.599;QD=37.96;ReadPosRankSum=1.409;VQSLOD=4.2231;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,26:26:72.24:1006,72,0	0/0:11,0:11:33.11:0,33,528	0/0:10,0:10:18.06:0,18,282	0/0:14,0:14:17.51:0,18,269	0/0:31,0:31:93.27:0,93,1415	0/0:22,0:21:66.20:0,66,1007	0/0:22,0:22:66.21:0,66,1023	0/0:28,0:28:81.27:0,81,1267	1/1:0,26:26:78.26:1089,78,0	0/0:26,0:26:78.27:0,78,1247	0/0:14,0:14:42.14:0,42,672	0/0:33,0:33:99:0,99,1583	0/0:22,0:22:66.23:0,66,1053	0/0:18,0:18:54.18:0,54,849	0/0:20,0:20:60.20:0,60,959	0/0:25,0:25:75.24:0,75,1173	0/0:25,0:25:72.25:0,72,1142	0/0:13,0:13:36.12:0,36,575	0/0:18,0:17:51.16:0,51,789	0/0:21,0:21:63.21:0,63,1001	0/0:15,0:15:42.14:0,42,672	0/0:26,0:26:78.26:0,78,1225	0/0:16,0:16:48.16:0,48,761	0/0:22,0:22:66.21:0,66,1029	0/0:23,0:23:69.24:0,69,1098	0/0:29,0:29:87.29:0,87,1367	0/0:33,0:33:99:0,99,1580	0/0:13,0:13:39.10:0,39,596
chr10	19062050	.	C	CT	3127.41	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-9.616;DP=640;FS=5.870;HRun=1;HaplotypeScore=69.3049;InbreedingCoeff=0.9992;MQ=86.34;MQ0=0;MQRankSum=-1.356;QD=39.09;ReadPosRankSum=2.266;VQSLOD=4.4308;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:60.20:0,60,778	0/0:8,0:8:24.07:0,24,299	0/0:21,0:21:57.10:0,57,695	0/0:28,0:27:68.49:0,68,823	0/0:22,0:22:63.20:0,63,818	0/0:28,0:28:81.26:0,81,1051	0/0:20,0:20:57.19:0,57,740	0/0:27,0:27:75.24:0,75,961	0/0:23,0:23:69.22:0,69,895	0/0:24,0:24:72.22:0,72,910	0/0:20,0:20:60.19:0,60,778	0/0:27,0:27:78.25:0,78,1012	0/0:21,0:21:63.19:0,63,803	0/0:21,0:21:63.20:0,63,818	0/0:24,0:24:69.22:0,69,895	1/1:0,28:28:84.28:1254,84,0	1/1:0,32:32:90.30:1339,90,0	1/1:1,19:20:46.40:677,46,0	0/0:25,0:25:75.21:0,75,944	0/0:29,0:29:78.24:0,78,997	0/0:13,0:13:36.12:0,36,467	0/0:25,0:25:75.23:0,75,959	0/0:17,0:17:51.12:0,51,643	0/0:25,0:25:72.16:0,72,884	0/0:22,0:21:63.20:0,63,818	0/0:22,0:22:63.19:0,63,793	0/0:33,0:33:96.31:0,96,1246	0/0:14,0:14:42.14:0,42,545
chr10	19062160	.	G	GTTGGTT	4234.90	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=12.979;DP=665;FS=1.262;HRun=0;HaplotypeScore=160.5825;InbreedingCoeff=0.9783;MQ=72.76;MQ0=1;MQRankSum=-8.865;QD=31.60;ReadPosRankSum=-0.144;VQSLOD=4.7086;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:21,4:24:63.14:1091,63,0	0/0:9,0:9:27.09:0,27,580	0/0:27,0:23:45.23:0,45,825	0/0:26,0:27:44.49:0,44,735	0/0:28,0:28:78.19:0,78,1445	0/0:23,0:23:69.18:0,69,1397	0/0:28,0:28:75.17:0,75,1312	0/0:37,0:37:72.05:0,72,1224	1/1:20,4:24:63.10:1075,63,0	0/0:28,0:28:81.25:0,81,1621	0/0:20,0:20:48.11:0,48,846	0/0:28,0:28:72.15:0,72,1335	0/0:18,0:18:48.12:0,48,930	0/0:16,0:16:45.13:0,45,893	0/0:27,0:27:72.22:0,72,1477	1/1:25,0:25:71.24:800,71,0	1/1:35,0:35:68.08:727,68,0	1/1:25,0:25:47:542,47,0	0/0:32,0:32:78.13:0,78,1249	0/0:28,0:28:69.19:0,69,1346	0/0:12,0:12:27.06:0,27,505	0/0:18,0:18:42.09:0,42,696	0/0:14,0:14:39.12:0,39,824	0/0:17,0:17:6.69:0,7,963	0/0:21,0:21:60.18:0,60,1258	0/0:19,0:19:51.15:0,51,939	0/0:37,0:35:99:0,99,1939	0/0:17,0:17:48.13:0,48,876
chr10	19062176	.	G	GTTT	4228.67	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=15.715;DP=652;FS=1.327;HRun=5;HaplotypeScore=121.0682;InbreedingCoeff=0.9992;MQ=70.39;MQ0=1;MQRankSum=-9.008;QD=30.87;ReadPosRankSum=0.284;VQSLOD=2.0857;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:31:59.67:369,60,0	0/0:10,0:10:30.09:0,30,438	0/0:34,0:30:76.07:0,76,1083	0/0:33,0:31:45.52:0,46,727	0/0:27,0:27:78.22:0,78,1148	0/0:26,0:26:75.25:0,75,1137	0/0:26,0:26:69.19:0,69,1002	0/0:34,0:34:85.10:0,85,1245	1/1:19,0:25:25.89:250,26,0	0/0:26,0:26:75.24:0,75,1129	0/0:16,0:16:45.14:0,45,665	0/0:23,0:23:66.15:0,66,941	0/0:20,0:20:32.46:0,32,760	0/0:17,0:17:48.12:0,48,676	0/0:26,0:26:78.22:0,78,1131	1/1:6,24:30:84.27:1634,84,0	1/1:5,21:26:51.14:984,51,0	1/1:10,14:24:54.12:992,54,0	0/0:22,0:22:60.07:0,60,891	0/0:24,0:24:63.21:0,63,965	0/0:10,0:10:27.09:0,27,404	0/0:15,0:15:45.12:0,45,651	0/0:15,0:15:42.13:0,42,621	0/0:19,0:19:54.18:0,54,823	0/0:22,0:22:63.18:0,63,904	0/0:22,0:22:57.17:0,57,830	0/0:34,0:32:96.27:0,96,1396	0/0:14,0:14:39.13:0,39,598
chr10	19062179	.	TTG	T	1313.76	PASS	AB=0.967;AC=7;AF=0.125;AN=56;BaseQRankSum=12.574;DP=658;FS=3.656;HRun=0;HaplotypeScore=116.4570;InbreedingCoeff=0.5106;MQ=70.59;MQ0=1;MQRankSum=-3.852;QD=9.45;ReadPosRankSum=0.972;VQSLOD=3.1291;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:32,0:31:99:142,0,288	0/0:10,0:10:30.09:0,30,519	0/0:36,0:32:85.49:0,85,1431	0/0:33,0:31:68.42:0,68,994	0/0:26,0:26:78.25:0,78,1392	0/0:25,0:25:75.26:0,75,1362	0/0:26,0:26:72.21:0,72,1255	0/0:31,0:31:87.85:0,88,1549	0/1:25,0:25:45.94:46,0,289	0/0:28,0:28:81.25:0,81,1390	0/0:16,0:16:48.13:0,48,823	0/0:24,0:24:72.19:0,72,1222	0/0:19,0:19:57.19:0,57,1010	0/0:17,0:17:51.14:0,51,856	0/0:28,0:28:84.22:0,84,1421	1/1:28,2:30:76.49:701,76,0	0/1:24,3:27:25.24:88,0,25	1/1:18,7:25:37.28:479,37,0	0/0:24,0:24:62.51:0,63,1060	0/0:22,0:22:63.22:0,63,1153	0/0:11,0:11:30.03:0,30,498	0/0:15,0:15:45.15:0,45,781	0/0:15,0:15:42.14:0,42,768	0/0:20,0:20:60.18:0,60,1046	0/0:23,0:23:69.20:0,69,1173	0/0:21,0:21:63.22:0,63,1124	0/0:35,0:33:99:0,102,1793	0/0:14,0:14:39.13:0,39,714
chr10	19062180	.	TG	T	611.62	PASS	AB=0.918;AC=6;AF=0.107;AN=56;BaseQRankSum=11.483;DP=655;FS=6.301;HRun=1;HaplotypeScore=106.1014;InbreedingCoeff=0.6225;MQ=69.98;MQ0=1;MQRankSum=-7.153;QD=5.51;ReadPosRankSum=-0.221;VQSLOD=0.1351;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:30,3:32:99:131,0,143	0/0:10,0:10:30.09:0,30,420	0/0:35,0:32:85.13:0,85,1119	0/0:32,0:30:60.76:0,61,748	0/0:26,0:26:78.25:0,78,1115	0/0:25,0:25:75.25:0,75,1095	0/0:24,0:24:72.21:0,72,1012	0/0:32,0:32:69.06:0,69,1243	0/1:21,2:23:25.57:26,0,120	0/0:27,0:27:81.25:0,81,1135	0/0:16,0:16:48.13:0,48,675	0/0:25,0:25:75.18:0,75,1014	0/0:19,0:19:57.17:0,57,811	0/0:17,0:17:51.13:0,51,703	0/0:29,0:29:87.20:0,87,1172	1/1:30,0:30:65.42:353,65,0	0/0:25,0:25:14.71:0,15,147	1/1:25,0:25:43.92:239,44,0	0/0:23,0:23:44.33:0,44,858	0/0:22,0:22:63.21:0,63,921	0/0:12,0:12:36.01:0,36,442	0/0:16,0:16:48:0,48,634	0/0:15,0:15:42.14:0,42,614	0/0:20,0:20:60.10:0,60,830	0/0:23,0:23:69.19:0,69,953	0/0:21,0:21:63.21:0,63,905	0/0:35,0:33:99:0,102,1428	0/0:14,0:14:39.13:0,39,570
chr10	19062181	.	G	GTTT	1892.25	PASS	AB=0.801;AC=7;AF=0.125;AN=56;BaseQRankSum=14.189;DP=658;FS=1.949;HRun=4;HaplotypeScore=128.5485;InbreedingCoeff=0.5285;MQ=70.54;MQ0=1;MQRankSum=-6.672;QD=13.91;ReadPosRankSum=2.086;VQSLOD=0.1408;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:20,10:31:98.78:648,0,99	0/0:9,0:9:27.08:0,27,393	0/0:37,0:33:72.68:0,73,1058	0/0:31,0:29:59.59:0,60,854	0/0:29,0:29:75.25:0,75,1144	0/0:26,0:26:72.21:0,72,1059	0/0:23,0:23:69.20:0,69,1013	0/0:33,0:33:89.86:0,90,1228	0/1:12,10:23:80.36:529,0,80	0/0:27,0:27:75.22:0,75,1093	0/0:16,0:16:42.09:0,42,596	0/0:25,0:25:72.17:0,72,1011	0/0:19,0:19:57.19:0,57,855	0/0:17,0:17:45.12:0,45,643	0/0:30,0:30:81.22:0,81,1190	1/1:32,0:32:64.54:426,65,0	0/1:25,0:25:10.24:220,0,10	1/1:24,0:24:26.24:212,26,0	0/0:22,0:22:51.04:0,51,758	0/0:22,0:22:63.20:0,63,940	0/0:12,0:12:32.99:0,33,411	0/0:16,0:16:45.12:0,45,616	0/0:15,0:15:42.12:0,42,620	0/0:20,0:20:60.14:0,60,836	0/0:24,0:24:66.19:0,66,969	0/0:21,0:21:63.20:0,63,933	0/0:34,0:33:96.32:0,96,1451	0/0:14,0:14:39.13:0,39,597
chr10	19062185	.	TG	T	1855.21	PASS	AB=0.943;AC=7;AF=0.125;AN=56;BaseQRankSum=13.216;DP=656;FS=0.429;HRun=1;HaplotypeScore=101.2101;InbreedingCoeff=0.5405;MQ=72.90;MQ0=1;MQRankSum=-7.578;QD=13.74;ReadPosRankSum=1.007;VQSLOD=2.8517;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:27,3:29:99:210,0,172	0/0:9,0:9:27.08:0,27,368	0/0:34,1:32:86.94:0,87,1135	0/0:32,0:30:66.13:0,66,827	0/0:28,0:28:84.27:0,84,1177	0/0:25,0:25:75.22:0,75,1032	0/0:26,0:26:78.20:0,78,1040	0/0:33,0:33:96.25:0,96,1245	0/1:21,2:23:88.54:89,0,148	0/0:26,0:26:78.25:0,78,1085	0/0:15,0:15:44.80:0,45,591	0/0:24,0:24:72.21:0,72,991	0/0:19,0:19:57.19:0,57,813	0/0:15,0:15:45.12:0,45,603	0/0:28,0:28:84.28:0,84,1197	1/1:2,30:32:83.21:998,83,0	0/1:26,0:26:3.96:4,0,56	1/1:9,15:24:58.21:693,58,0	0/0:22,0:22:41.31:0,41,770	0/0:22,0:22:63.18:0,63,856	0/0:12,0:12:36.08:0,36,474	0/0:17,0:17:45.12:0,45,604	0/0:16,0:16:48.13:0,48,647	0/0:21,0:21:63.13:0,63,817	0/0:23,0:23:69.23:0,69,985	0/0:21,0:21:63.18:0,63,865	0/0:38,0:37:99:0,111,1408	0/0:14,0:14:39.13:0,39,556
chr10	19062659	.	GA	G	1214.43	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=4.233;DP=536;FS=6.429;HRun=3;HaplotypeScore=61.2856;InbreedingCoeff=0.9989;MQ=91.97;MQ0=0;MQRankSum=-4.387;QD=25.84;ReadPosRankSum=4.046;VQSLOD=2.6605;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,28:30:60.19:742,60,0	0/0:10,0:10:30.08:0,30,399	0/0:25,0:25:66.09:0,66,796	0/0:20,0:20:48.06:0,48,598	0/0:15,0:15:42.10:0,42,547	0/0:15,0:15:42.13:0,42,586	0/0:19,0:19:56.99:0,57,740	0/0:25,0:25:63.17:0,63,815	1/1:0,17:17:48.15:594,48,0	0/0:15,0:15:36.10:0,36,461	0/0:13,0:13:30.02:0,30,406	0/0:14,0:14:42.11:0,42,553	0/0:19,0:19:51.13:0,51,678	0/0:23,0:23:69.18:0,69,905	0/0:22,0:22:66.21:0,66,931	0/0:25,0:25:75.24:0,75,1046	0/0:30,0:30:84.22:0,84,1133	0/0:22,0:22:63.18:0,63,867	0/0:15,0:15:42.07:0,42,500	0/0:13,0:13:35.96:0,36,451	0/0:25,0:25:75.22:0,75,1041	0/0:11,0:11:30.07:0,30,368	0/0:13,0:13:39.08:0,39,504	0/0:24,0:24:72.22:0,72,1000	0/0:23,0:23:69.12:0,69,890	0/0:12,0:12:36.05:0,36,422	0/0:20,0:20:60.20:0,60,862	0/0:21,0:21:57.19:0,57,820
chr10	19063461	.	A	AATAATA	5855.32	PASS	AB=1.000;AC=46;AF=0.958;AN=48;BaseQRankSum=-2.946;DP=286;FS=0.000;HRun=0;HaplotypeScore=89.4027;InbreedingCoeff=-0.0876;MQ=54.99;MQ0=3;MQRankSum=0.982;QD=21.37;ReadPosRankSum=2.808;VQSLOD=4.0485;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:19:26.54:257,27,0	0/1:6,0:6:11.86:112,0,12	./.	./.	1/1:10,0:8:3.48:40,3,0	1/1:13,0:13:30.10:500,30,0	1/1:5,0:5:12.03:167,12,0	1/1:41,0:41:59.95:903,60,0	1/1:12,0:12:13.37:162,13,0	1/1:6,0:6:2.74:55,3,0	1/1:3,0:3:6.49:113,6,0	1/1:7,4:12:6.02:69,6,0	1/1:10,0:10:17.27:272,17,0	1/1:7,0:7:6.02:105,6,0	1/1:12,0:12:15.05:314,15,0	1/1:10,0:10:18.06:238,18,0	0/1:15,0:15:5.67:295,0,6	1/1:19,0:19:31.32:449,31,0	1/1:14,0:14:21.02:335,21,0	1/1:6,0:5:9.03:161,9,0	1/1:6,0:6:18.04:275,18,0	./.	./.	1/1:3,0:3:2.99:24,3,0	1/1:9,0:9:18.06:299,18,0	1/1:9,0:9:15.05:247,15,0	1/1:10,0:10:3.97:30,4,0	1/1:17,0:17:26.74:433,27,0
chr10	19063485	.	AATGATGATG	A	2337.49	PASS	AB=1.000;AC=22;AF=0.458;AN=48;BaseQRankSum=-1.663;DP=309;FS=6.119;HRun=0;HaplotypeScore=128.2449;InbreedingCoeff=0.4635;MQ=46.86;MQ0=19;MQRankSum=-0.570;QD=15.79;ReadPosRankSum=-1.892;VQSLOD=2.0616;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:21:9.03:157,9,0	0/1:8,0:8:31.30:242,0,31	./.	./.	1/1:8,0:6:4.72:155,5,0	0/0:13,0:13:11.99:0,12,131	0/0:6,0:6:6.01:0,6,100	0/0:41,0:33:8.80:0,9,53	1/1:12,0:12:12.04:202,12,0	1/1:4,5:8:0.22:64,0,0	1/1:8,0:5:2.76:108,3,0	0/0:9,0:9:11.97:0,12,98	1/1:9,0:9:7.09:224,7,0	0/1:7,0:7:3.60:343,0,4	0/0:19,0:18:44.37:0,44,1064	./.	0/0:12,0:12:2.43:0,2,12	1/1:16,0:16:3.01:62,3,0	0/0:18,0:17:16.22:0,16,130	0/0:9,0:8:17.21:0,17,119	0/0:9,0:8:17.79:0,18,151	0/0:4,0:4:8.99:0,9,75	0/0:5,0:5:9:0,9,102	./.	0/1:13,0:11:99:102,0,113	1/1:6,2:7:6.01:100,6,0	1/1:15,0:15:38.74:737,39,0	0/1:13,0:12:2.58:3,0,16
chr10	19063489	.	ATG	A	261.11	PASS	AB=0.875;AC=10;AF=0.192;AN=52;BaseQRankSum=2.031;DP=325;FS=2.030;HRun=0;HaplotypeScore=102.9081;InbreedingCoeff=0.1342;MQ=46.69;MQ0=22;MQRankSum=5.921;QD=2.93;ReadPosRankSum=1.143;VQSLOD=2.3470;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:21:20.92:0,21,150	0/1:5,3:8:12.71:78,0,13	./.	./.	1/1:7,1:6:10.77:52,11,0	0/0:14,0:14:32.29:0,32,254	0/0:7,0:6:11.84:0,12,114	0/0:45,0:32:94.12:0,94,740	0/0:13,0:13:12.30:0,12,63	0/0:9,0:8:2.37:0,2,31	0/1:9,0:6:18.79:36,0,19	0/0:10,0:10:20.03:0,20,116	0/1:7,2:9:26.57:27,0,51	1/1:6,2:8:3.31:45,3,0	0/0:20,0:19:56.45:0,56,905	0/0:6,0:6:17.91:0,18,132	0/0:11,0:12:29.65:0,30,200	0/0:14,0:15:30.20:0,30,260	0/0:17,0:16:44.84:0,45,404	0/0:9,0:8:17.65:0,18,137	0/0:9,0:8:23.52:0,24,178	0/0:7,0:7:14.37:0,14,95	0/0:5,0:5:8.58:0,9,44	0/0:6,0:6:5.88:0,6,36	0/1:14,0:12:20.89:21,0,41	0/0:9,0:7:8.31:0,8,74	0/1:11,5:16:45.47:45,0,48	0/1:16,1:16:61.54:99,0,62
chr10	19063509	.	GATGATGATGATGATGATGGTGA	G	946.78	PASS	AB=1.000;AC=5;AF=0.100;AN=50;BaseQRankSum=5.119;DP=362;FS=29.096;HRun=0;HaplotypeScore=213.5285;InbreedingCoeff=0.2967;MQ=47.22;MQ0=32;MQRankSum=-5.062;QD=15.03;ReadPosRankSum=3.370;VQSLOD=0.9437;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,16:26:9.03:369,9,0	0/0:9,0:9:24.08:0,24,896	./.	./.	0/0:12,0:10:24.08:0,24,980	0/0:13,0:13:30.08:0,30,890	0/0:12,0:11:15.04:0,15,357	0/0:41,0:21:60:0,60,1443	0/1:13,0:13:26.23:370,0,26	0/0:11,0:8:16.99:0,17,351	0/0:11,0:8:24.08:0,24,780	0/0:9,0:9:21.07:0,21,1205	0/0:10,0:10:30.08:0,30,1005	0/0:15,0:15:45.14:0,45,1491	0/0:21,0:20:60.12:0,60,3921	./.	0/1:10,0:10:10.12:112,0,10	0/1:12,0:12:99:211,0,223	0/0:16,0:15:45.08:0,45,1579	0/0:13,0:12:30.10:0,30,1423	0/0:8,0:7:21.07:0,21,867	0/0:11,0:10:24.08:0,24,1252	0/0:10,0:10:18.04:0,18,1011	0/0:6,0:6:6.02:0,6,297	0/0:14,0:11:33.11:0,33,1517	0/0:11,0:9:27.09:0,27,955	0/0:18,0:18:54.14:0,54,1837	0/0:20,0:19:57.15:0,57,2383
chr10	19063521	.	GATGATGGTGA	G	640.25	PASS	AB=1.000;AC=5;AF=0.096;AN=52;BaseQRankSum=5.391;DP=344;FS=68.305;HRun=0;HaplotypeScore=126.6444;InbreedingCoeff=0.5380;MQ=49.59;MQ0=32;MQRankSum=-0.219;QD=15.62;ReadPosRankSum=4.192;VQSLOD=-0.5282;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:21,2:22:9.03:293,9,0	0/0:10,0:10:13.54:0,14,274	0/0:3,0:1:3.01:0,3,59	./.	0/0:14,0:12:26.45:0,26,544	0/0:12,0:12:21.27:0,21,247	0/0:10,0:9:6.89:0,7,120	0/0:37,0:21:60.18:0,60,1005	1/1:1,11:12:12.04:403,12,0	0/0:11,0:8:11.71:0,12,152	0/0:13,0:10:16.30:0,16,406	0/0:12,0:12:30.10:0,30,774	0/0:8,0:8:10.22:0,10,300	0/0:14,0:14:21.77:0,22,495	0/0:21,0:20:60.03:0,60,2218	./.	0/0:4,0:4:2.05:0,2,6	0/1:5,0:5:17.29:61,0,17	0/0:15,0:14:42.14:0,42,882	0/0:12,0:11:30.10:0,30,618	0/0:10,0:9:27.07:0,27,515	0/0:13,0:12:30.10:0,30,785	0/0:12,0:12:24.06:0,24,612	0/0:6,0:6:6.02:0,6,160	0/0:18,0:15:45.15:0,45,796	0/0:12,0:10:25.08:0,25,608	0/0:17,0:17:5.18:0,5,243	0/0:17,0:16:48.09:0,48,892
chr10	19063528	.	GTGA	G	398.42	PASS	AC=10;AF=0.192;AN=52;BaseQRankSum=2.704;DP=356;FS=9.532;HRun=0;HaplotypeScore=88.6671;InbreedingCoeff=0.8013;MQ=50.37;MQ0=29;MQRankSum=-0.940;QD=6.64;ReadPosRankSum=0.684;VQSLOD=1.6689;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:20:8.98:71,9,0	0/0:10,0:10:18.84:0,19,155	0/0:6,0:3:8.95:0,9,87	./.	0/0:14,0:13:35.95:0,36,513	1/1:13,0:13:24.07:317,24,0	1/1:2,6:7:3.01:42,3,0	0/0:42,0:29:39.05:0,39,596	1/1:12,0:12:11.97:95,12,0	0/0:10,0:7:10.79:0,11,102	0/0:14,0:11:29.94:0,30,392	0/0:13,0:13:33.04:0,33,423	0/0:10,0:10:25.03:0,25,244	0/0:13,0:13:38.73:0,39,475	0/0:22,0:21:57.20:0,57,1099	./.	0/0:5,0:6:0.46:0,0,1	1/1:4,0:5:2.49:19,2,0	0/0:16,0:15:30.04:0,30,420	0/0:13,0:12:21.05:0,21,299	0/0:10,0:9:12.02:0,12,149	0/0:13,0:12:30.06:0,30,396	0/0:12,0:12:24.05:0,24,305	0/0:5,0:5:6.02:0,6,80	0/0:19,0:16:38.99:0,39,482	0/0:13,0:11:33.01:0,33,534	0/0:16,0:16:40.47:0,40,326	0/0:17,0:16:40.25:0,40,465
chr10	19065911	.	TAC	T	6897.10	PASS	AB=0.765;AC=45;AF=0.804;AN=56;BaseQRankSum=-5.411;DP=619;FS=15.327;HRun=0;HaplotypeScore=127.7179;InbreedingCoeff=0.5631;MQ=66.35;MQ0=7;MQRankSum=3.940;QD=14.02;ReadPosRankSum=1.412;VQSLOD=3.6919;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:19.09:0,19,544	1/1:1,5:6:9.03:104,9,0	0/0:29,0:17:6.01:0,6,71	0/0:30,0:19:13.28:0,13,169	1/1:6,7:13:16.76:253,17,0	1/1:10,7:18:20.37:199,20,0	1/1:9,17:26:33.10:381,33,0	0/1:8,8:16:14.84:184,0,15	0/0:21,0:21:33.06:0,33,372	1/1:7,11:18:24.07:276,24,0	1/1:6,7:13:18.05:208,18,0	1/1:13,23:36:55.76:703,56,0	1/1:9,13:22:41.77:442,42,0	1/1:2,14:17:41.96:464,42,0	1/1:8,11:20:34.68:335,35,0	1/1:20,0:20:2.36:9,2,0	1/1:22,0:23:8.01:28,8,0	0/1:33,0:32:14.04:14,0,36	1/1:8,4:12:9.43:105,9,0	1/1:3,10:13:18.04:199,18,0	1/1:20,30:51:69.04:732,69,0	1/1:2,6:8:7.77:164,8,0	1/1:3,12:15:24.06:268,24,0	1/1:17,26:44:72:789,72,0	0/1:7,10:17:13.94:236,0,14	1/1:8,12:20:30.04:333,30,0	1/1:8,9:16:21.03:229,21,0	1/1:5,9:14:21.06:243,21,0
chr10	19065938	.	ACGCACACG	A	1149.31	PASS	AB=0.964;AC=26;AF=0.481;AN=54;BaseQRankSum=7.650;DP=602;FS=0.836;HRun=0;HaplotypeScore=176.9656;InbreedingCoeff=-0.6103;MQ=55.40;MQ0=14;MQRankSum=-1.106;QD=2.18;ReadPosRankSum=-1.927;VQSLOD=2.4654;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:40.43:0,40,753	0/0:10,0:10:5.40:0,5,418	./.	0/1:10,0:4:5.97:6,0,106	0/1:15,0:15:42.54:43,0,231	0/1:18,0:18:26.32:26,0,515	0/1:29,0:28:47.17:47,0,645	0/1:24,0:22:46.42:54,0,46	0/0:19,0:19:28.57:0,29,727	0/1:17,0:17:37.53:38,0,246	0/1:14,0:15:0.20:0,0,392	0/1:32,0:32:84.73:85,0,1015	0/1:22,0:23:73.99:74,0,513	0/1:28,0:28:20.19:20,0,1136	0/1:17,0:18:33.70:34,0,390	1/1:1,20:21:3.07:88,3,0	1/1:3,22:25:10.46:249,10,0	0/1:2,26:28:35.57:228,0,36	0/1:10,0:8:50.70:51,0,112	0/1:17,0:17:31.44:31,0,267	0/1:64,0:62:76.78:77,0,1550	0/1:11,0:11:11.42:11,0,347	0/1:16,0:17:37.15:37,0,269	0/1:36,0:36:5.41:5,0,1379	0/1:21,0:20:17.14:17,0,555	0/1:19,0:21:40.73:41,0,452	0/1:13,0:13:15.15:15,0,368	0/1:12,0:11:24.25:24,0,472
chr10	19066471	.	GT	G	2603.74	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.798;DP=773;FS=7.066;HRun=1;HaplotypeScore=78.2597;InbreedingCoeff=0.9996;MQ=92.40;MQ0=0;MQRankSum=-5.471;QD=36.16;ReadPosRankSum=1.444;VQSLOD=3.8376;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,48:48:99:1844,132,0	0/0:13,0:13:39.09:0,39,574	0/0:39,0:39:99:0,108,1554	0/0:29,0:28:80.85:0,81,1077	0/0:34,0:34:99:0,102,1595	0/0:29,0:29:87.30:0,87,1390	0/0:29,0:29:87.28:0,87,1366	0/0:31,0:31:93.31:0,93,1443	1/1:0,24:24:63.21:881,63,0	0/0:31,0:31:90.31:0,90,1438	0/0:26,0:26:75.24:0,75,1159	0/0:34,0:34:99:0,102,1548	0/0:24,0:24:72.24:0,72,1139	0/0:28,0:28:84.28:0,84,1324	0/0:39,0:39:99:0,117,1772	0/0:26,0:25:78.26:0,78,1232	0/0:23,0:23:69.18:0,69,1040	0/0:13,0:13:39.09:0,39,584	0/0:13,0:13:39.12:0,39,593	0/0:34,0:34:99:0,102,1619	0/0:34,0:34:99:0,99,1532	0/0:32,0:32:96.31:0,96,1481	0/0:23,0:23:69.24:0,69,1103	0/0:23,0:23:69.22:0,69,1067	0/0:24,0:24:72.24:0,72,1136	0/0:33,0:33:96.30:0,96,1465	0/0:27,0:27:81.28:0,81,1295	0/0:10,0:10:30.10:0,30,479
chr10	19066763	.	TG	T	3067.23	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=11.133;DP=620;FS=12.912;HRun=8;HaplotypeScore=64.7389;InbreedingCoeff=0.9953;MQ=79.73;MQ0=0;MQRankSum=-1.884;QD=25.35;ReadPosRankSum=3.292;VQSLOD=3.6073;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,33:35:96.15:925,96,0	0/0:5,0:5:15.04:0,15,171	0/0:19,0:19:37.64:0,38,422	0/0:20,0:19:46.28:0,46,486	0/0:26,0:26:72.20:0,72,846	0/0:22,0:22:51.14:0,51,605	0/0:20,0:20:45.12:0,45,531	0/0:25,0:25:57.17:0,57,679	1/1:1,20:21:60.09:579,60,0	0/0:28,0:28:72.14:0,72,849	0/0:19,1:20:22.16:0,22,533	0/0:18,0:18:51.16:0,51,616	0/0:21,0:21:60.15:0,60,698	0/0:24,1:25:34.21:0,34,680	0/0:22,0:22:66.19:0,66,786	1/1:1,16:17:45.07:434,45,0	1/1:1,32:33:96.15:927,96,0	1/1:2,13:15:39.06:377,39,0	0/0:13,0:13:29.30:0,29,333	0/0:21,0:21:57.16:0,57,676	0/0:23,0:23:57.61:0,58,655	0/0:17,0:17:48.08:0,48,561	0/0:27,0:27:76.41:0,76,889	0/0:22,0:22:57.17:0,57,688	0/0:26,0:26:75.23:0,75,906	0/0:22,0:22:54.17:0,54,651	0/0:34,0:34:84.26:0,84,1009	0/0:23,0:23:66.20:0,66,797
chr10	19066944	.	AG	A	2645.81	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=12.109;DP=722;FS=0.471;HRun=1;HaplotypeScore=75.4027;InbreedingCoeff=0.9989;MQ=86.64;MQ0=0;MQRankSum=-4.621;QD=37.80;ReadPosRankSum=3.511;VQSLOD=4.2763;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,44:44:99:1719,123,0	0/0:8,0:8:24.08:0,24,384	0/0:21,0:21:60.18:0,60,903	0/0:27,0:27:72.21:0,72,1086	0/0:32,0:32:96.33:0,96,1531	0/0:23,0:23:69.24:0,69,1103	0/0:26,0:26:78.27:0,78,1233	0/0:38,0:38:99:0,114,1778	1/1:0,26:26:75.25:1048,75,0	0/0:22,0:22:63.21:0,63,1008	0/0:15,0:15:45.15:0,45,719	0/0:26,0:26:78.25:0,78,1223	0/0:25,0:25:75.23:0,75,1139	0/0:28,0:28:84.29:0,84,1340	0/0:25,0:25:69.24:0,69,1103	0/0:18,0:18:54.18:0,54,863	0/0:36,0:36:99:0,108,1701	0/0:27,0:27:81.28:0,81,1295	0/0:23,0:23:69.23:0,69,1082	0/0:27,0:27:81.26:0,81,1268	0/0:26,0:26:75.26:0,75,1193	0/0:19,0:19:57.19:0,57,907	0/0:17,0:17:51.17:0,51,814	0/0:22,0:22:66.23:0,66,1055	0/0:33,0:32:99:0,99,1560	0/0:40,0:40:99:0,120,1880	0/0:27,0:27:81.28:0,81,1292	0/0:21,0:21:63.18:0,63,979
chr10	19067932	.	GACTAGCA	G	3864.11	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.855;DP=657;FS=22.868;HRun=0;HaplotypeScore=152.9668;InbreedingCoeff=0.9981;MQ=89.37;MQ0=0;MQRankSum=-11.228;QD=65.49;ReadPosRankSum=1.320;VQSLOD=1.7082;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:43:99:0,126,4792	0/0:9,0:9:27.09:0,27,1069	0/0:32,0:32:83.85:0,84,3008	0/0:21,0:21:36.09:0,36,1575	0/0:20,0:20:51.17:0,51,2053	0/0:18,0:18:54.19:0,54,2159	0/0:43,0:43:99:0,105,4762	0/0:25,0:25:69.24:0,69,2787	0/0:24,0:24:69.24:0,69,2719	0/0:16,0:16:42.14:0,42,1527	0/0:10,0:10:30.10:0,30,1212	0/0:29,0:29:87.30:0,87,3407	0/0:29,0:29:81.28:0,81,3234	0/0:19,0:19:57.18:0,57,2181	0/0:31,0:31:87.28:0,87,3360	1/1:2,26:28:72.25:1897,72,0	1/1:0,17:17:48.16:1255,48,0	1/1:2,12:14:27.09:712,27,0	0/0:8,0:8:24.07:0,24,808	0/0:32,0:32:93.32:0,93,3406	0/0:49,0:49:99:0,141,5473	0/0:15,0:15:45.15:0,45,1671	0/0:10,0:10:30.10:0,30,1093	0/0:32,0:32:90.29:0,90,3534	0/0:22,0:22:66.23:0,66,2645	0/0:20,0:20:60.21:0,60,2401	0/0:25,0:25:72.23:0,72,2809	0/0:16,0:16:48.16:0,48,1906
chr10	19068433	.	AGT	A	8009.71	PASS	AB=1.000;AC=51;AF=0.911;AN=56;BaseQRankSum=-8.958;DP=573;FS=26.666;HRun=0;HaplotypeScore=88.7592;InbreedingCoeff=0.5266;MQ=61.10;MQ0=5;MQRankSum=0.431;QD=15.74;ReadPosRankSum=2.197;VQSLOD=3.0020;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:21:21.20:365,21,0	1/1:9,0:9:1.26:109,1,0	0/0:20,0:13:27.60:0,28,276	0/0:44,0:19:17.55:0,18,251	1/1:26,0:25:29.26:334,29,0	1/1:29,0:29:9.10:481,9,0	1/1:23,0:23:12.41:310,12,0	1/1:34,0:34:77.32:629,77,0	1/1:11,0:11:0.62:113,1,0	1/1:25,0:25:42.06:505,42,0	1/1:23,0:22:50.47:409,50,0	0/1:25,0:25:20.36:281,0,20	1/1:15,0:15:30.27:248,30,0	1/1:12,0:12:23.98:202,24,0	1/1:14,0:14:6.22:138,6,0	1/1:17,0:17:30.17:388,30,0	1/1:22,0:22:42.15:325,42,0	1/1:16,0:16:24.40:293,24,0	1/1:3,7:9:21.42:177,21,0	1/1:15,0:15:21.28:277,21,0	1/1:14,0:14:20.97:173,21,0	1/1:21,0:20:27.85:250,28,0	1/1:24,0:24:46.41:378,46,0	1/1:14,0:13:8.02:158,8,0	1/1:23,0:23:29.45:365,29,0	1/1:20,0:20:2.07:363,2,0	1/1:18,0:16:45.27:329,45,0	1/1:27,0:26:38.76:415,39,0
chr10	19068931	.	A	AC	27475.32	PASS	AC=52;AF=0.963;AN=54;BaseQRankSum=-2.032;DP=752;FS=0.000;HRun=1;HaplotypeScore=62.2105;InbreedingCoeff=0.8750;MQ=56.95;MQ0=6;MQRankSum=2.158;QD=38.32;ReadPosRankSum=1.446;VQSLOD=5.3525;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,47:49:99:1827,126,0	1/1:0,9:9:18.06:270,18,0	./.	0/0:23,0:4:5.94:0,6,44	1/1:0,23:23:66.22:979,66,0	1/1:0,29:29:75.25:1124,75,0	1/1:1,26:26:63.21:943,63,0	1/1:0,29:29:81.11:1103,81,0	1/1:2,28:30:78.26:1131,78,0	1/1:0,21:21:63.19:921,63,0	1/1:0,20:20:54.13:772,54,0	1/1:1,26:27:57.19:854,57,0	1/1:1,21:22:60.20:897,60,0	1/1:1,30:31:75.17:1096,75,0	1/1:1,29:30:84.28:1257,84,0	1/1:0,33:33:84.28:1258,84,0	1/1:0,38:38:96.33:1435,96,0	1/1:0,24:24:60.20:899,60,0	1/1:3,18:18:54.17:779,54,0	1/1:0,25:25:69.23:1030,69,0	1/1:0,53:53:99:2068,138,0	1/1:0,15:15:45.15:673,45,0	1/1:0,18:18:33.11:494,33,0	1/1:1,46:47:99:1753,117,0	1/1:0,22:22:57.19:844,57,0	1/1:1,26:27:77.91:1107,78,0	1/1:0,34:34:96.33:1437,96,0	1/1:0,12:13:36.12:525,36,0
chr10	19069261	.	ATAGGTGGGTG	A	3975.74	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=10.283;DP=694;FS=8.278;HRun=0;HaplotypeScore=205.4211;InbreedingCoeff=0.9986;MQ=78.84;MQ0=0;MQRankSum=-9.862;QD=64.12;ReadPosRankSum=-0.257;VQSLOD=2.5772;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,30:38:69.23:2155,69,0	0/0:10,0:10:30.10:0,30,1490	0/0:25,0:25:55.73:0,56,2301	0/0:18,0:18:45:0,45,1865	0/0:20,0:20:51.16:0,51,2164	0/0:32,0:32:90.30:0,90,4499	0/0:19,0:19:45.09:0,45,2000	0/0:21,0:21:51.18:0,51,2519	1/1:3,21:24:57.20:1820,57,0	0/0:26,0:26:69.23:0,69,3291	0/0:25,0:25:63.20:0,63,3048	0/0:21,0:21:51.18:0,51,2551	0/0:29,0:29:78.27:0,78,3822	0/0:30,0:30:78.12:0,78,3258	0/0:36,0:36:90.31:0,90,4475	0/0:34,0:34:90.31:0,90,4627	0/0:37,0:37:99:0,102,4919	0/0:21,0:21:57.20:0,57,2748	0/0:22,0:22:57.20:0,57,2537	0/0:25,0:25:57.20:0,57,2950	0/0:28,0:28:81.26:0,81,4004	0/0:21,0:21:60.21:0,60,2912	0/0:24,0:24:63.17:0,63,2953	0/0:38,0:38:99:0,111,5656	0/0:14,0:14:36.12:0,36,1833	0/0:24,0:24:60.18:0,60,2733	0/0:24,0:23:69.24:0,69,3493	0/0:8,0:8:24.08:0,24,1247
chr10	19069415	.	ACTTGGGGAGGTG	A	23816.69	PASS	AB=1.000;AC=41;AF=0.759;AN=54;BaseQRankSum=15.815;DP=421;FS=3.743;HRun=0;HaplotypeScore=252.6054;InbreedingCoeff=0.9361;MQ=62.38;MQ0=0;MQRankSum=-14.521;QD=92.31;ReadPosRankSum=4.615;VQSLOD=4.1312;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,141,8049	1/1:0,4:4:12.04:439,12,0	0/0:9,0:9:17.05:0,17,274	0/1:15,0:15:0.10:0,0,968	1/1:2,8:10:29.97:677,30,0	1/1:1,13:14:42.14:1497,42,0	1/1:0,15:15:45.15:1619,45,0	1/1:1,8:9:27.09:957,27,0	0/0:27,0:27:81.28:0,81,4447	1/1:2,13:15:45.15:1608,45,0	1/1:2,8:10:27.09:767,27,0	1/1:0,12:12:36.12:1312,36,0	1/1:1,18:19:57.19:1990,57,0	1/1:2,16:19:57.18:1850,57,0	1/1:1,21:22:66.23:2329,66,0	0/0:27,0:27:81.28:0,81,4923	0/0:25,0:24:75.26:0,75,4532	0/0:27,0:27:81.28:0,81,4718	1/1:0,8:10:27.08:880,27,0	1/1:0,10:10:24.08:866,24,0	1/1:5,3:9:14.24:383,14,0	1/1:0,10:10:30.10:1016,30,0	1/1:0,9:9:27.09:974,27,0	1/1:3,7:10:30.10:807,30,0	1/1:0,6:6:18.06:659,18,0	1/1:1,14:16:48.16:1650,48,0	1/1:0,14:14:42.14:1535,42,0	./.
chr10	19069429	.	A	AAAC	13457.89	PASS	AB=1.000;AC=41;AF=0.759;AN=54;BaseQRankSum=16.212;DP=410;FS=2.206;HRun=0;HaplotypeScore=209.3898;InbreedingCoeff=0.8793;MQ=62.44;MQ0=0;MQRankSum=-13.878;QD=53.62;ReadPosRankSum=4.042;VQSLOD=5.2735;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,129,2373	1/1:0,4:5:15.05:318,15,0	0/0:9,0:9:17.64:0,18,262	0/1:10,0:10:23.05:23,0,187	1/1:0,8:9:21.07:435,21,0	1/1:2,13:15:45.15:917,45,0	1/1:2,15:17:45.15:902,45,0	1/1:0,8:8:24.08:525,24,0	0/0:25,0:25:72.25:0,72,1341	1/1:2,14:16:48.12:950,48,0	1/1:1,8:9:19:351,19,0	1/1:0,12:12:36.12:742,36,0	1/1:0,18:19:57.20:1173,57,0	1/1:1,15:17:51.17:963,51,0	1/1:1,21:22:63.22:1281,63,0	0/0:25,0:25:75.26:0,75,1378	0/0:27,0:26:78.27:0,78,1454	0/0:28,0:28:72.92:0,73,1359	1/1:0,8:8:24.07:473,24,0	1/1:1,9:11:27.08:502,27,0	1/1:1,3:5:9.03:179,9,0	1/1:0,10:10:27.56:549,28,0	1/1:1,9:10:30.09:570,30,0	1/1:0,7:7:21.07:427,21,0	1/1:1,6:7:21.06:398,21,0	1/1:4,14:19:48.16:917,48,0	1/1:1,14:15:42.14:865,42,0	./.
chr10	19069717	.	AT	A	5400.62	PASS	AB=0.764;AC=52;AF=0.929;AN=56;BaseQRankSum=-3.237;DP=360;FS=1.196;HRun=12;HaplotypeScore=55.7513;InbreedingCoeff=0.3603;MQ=69.78;MQ0=0;MQRankSum=-1.632;QD=15.30;ReadPosRankSum=1.895;VQSLOD=5.8077;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,9:12:26.88:209,27,0	1/1:2,2:5:7.99:52,8,0	0/1:10,1:9:8.62:9,0,63	0/0:7,0:7:11.53:0,12,72	1/1:5,9:14:23.87:186,24,0	1/1:4,16:20:47.79:371,48,0	1/1:3,8:11:23.90:186,24,0	1/1:5,18:24:52.81:400,53,0	1/1:3,10:13:29.85:232,30,0	1/1:4,17:21:46.78:349,47,0	1/1:8,16:24:17.29:314,17,0	1/1:0,4:4:11.95:93,12,0	1/1:3,1:4:2.96:23,3,0	1/1:1,10:11:26.89:209,27,0	1/1:4,3:7:11.94:93,12,0	1/1:2,16:18:41.82:325,42,0	1/1:3,18:22:25.39:370,25,0	1/1:2,12:14:32.85:255,33,0	0/1:4,7:11:6.31:139,0,6	1/1:4,9:13:23.87:186,24,0	1/1:2,3:5:11.95:93,12,0	1/1:2,3:5:8.93:70,9,0	1/1:5,12:17:32.85:255,33,0	1/1:3,1:4:2.96:23,3,0	1/1:2,10:12:26.89:209,27,0	1/1:5,16:23:45.86:335,46,0	1/1:7,15:22:14.31:295,14,0	1/1:0,5:6:16.98:122,17,0
chr10	19069755	.	CT	C	261.24	PASS	AB=0.964;AC=6;AF=0.107;AN=56;BaseQRankSum=-3.067;DP=391;FS=14.278;HRun=13;HaplotypeScore=97.7713;InbreedingCoeff=0.4247;MQ=63.42;MQ0=0;MQRankSum=1.187;QD=5.02;ReadPosRankSum=-0.214;VQSLOD=0.6524;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,9:16:4.22:185,4,0	0/0:7,0:7:13.40:0,13,63	0/0:15,0:13:13.12:0,13,103	0/1:9,0:7:6.69:7,0,24	0/0:15,0:15:16.85:0,17,93	0/0:17,0:17:40.65:0,41,194	0/0:8,0:8:16.95:0,17,91	0/0:13,0:13:17.52:0,18,88	1/1:4,10:14:0.62:168,1,0	0/0:22,0:22:49.24:0,49,266	0/0:21,0:21:32.43:0,32,165	0/0:13,0:13:26.85:0,27,135	0/0:7,0:7:17.16:0,17,90	0/0:11,0:11:23.89:0,24,113	0/0:11,0:11:24.33:0,24,136	0/0:20,1:21:26.12:0,26,390	0/0:22,0:22:35.96:0,36,331	0/1:12,1:13:0.95:1,0,137	0/0:17,0:17:27.95:0,28,158	0/0:12,0:12:17.50:0,18,106	0/0:9,0:9:7.53:0,8,39	0/0:8,0:8:14.35:0,14,80	0/0:14,0:14:20.55:0,21,107	0/0:4,0:4:5.80:0,6,34	0/0:20,0:20:53.13:0,53,294	0/0:15,0:15:28.31:0,28,157	0/0:27,0:27:53.49:0,53,277	0/0:9,0:9:14.62:0,15,93
chr10	19069768	.	T	TTTTTA	11459.30	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=-5.396;DP=391;FS=3.578;HRun=0;HaplotypeScore=79.2944;InbreedingCoeff=0.8887;MQ=69.42;MQ0=0;MQRankSum=-2.749;QD=39.79;ReadPosRankSum=-3.746;VQSLOD=3.4853;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:18.22:0,18,391	1/1:0,6:9:23.91:395,24,0	0/0:16,0:13:7.53:0,8,192	0/0:9,0:8:3.61:0,4,81	1/1:3,9:19:35.88:560,36,0	1/1:11,5:17:48.08:892,48,0	1/1:1,9:12:15.05:398,15,0	1/1:13,1:14:36.03:470,36,0	0/0:16,0:16:42.08:0,42,519	1/1:20,3:23:63.14:975,63,0	1/1:10,3:13:39.07:655,39,0	1/1:3,8:13:27.08:663,27,0	1/1:0,2:14:15.05:381,15,0	1/1:6,3:12:33.09:731,33,0	1/1:2,9:17:21.96:478,22,0	0/0:20,0:20:56.90:0,57,763	0/0:18,0:18:48.06:0,48,732	0/0:10,0:10:29.60:0,30,349	1/1:12,2:17:42.06:650,42,0	1/1:14,1:15:38.99:486,39,0	1/1:2,5:12:9.92:191,10,0	1/1:1,7:9:20.98:366,21,0	1/1:8,1:9:24.06:374,24,0	1/1:0,4:8:3.01:89,3,0	1/1:13,3:20:60.14:1061,60,0	1/1:9,2:11:33.02:422,33,0	1/1:11,6:22:62:1084,62,0	1/1:1,1:2:6.02:138,6,0
chr10	19073726	.	T	TG	391.81	PASS	AB=0.759;AC=15;AF=0.268;AN=56;BaseQRankSum=0.535;DP=434;FS=5.809;HRun=11;HaplotypeScore=81.2161;InbreedingCoeff=0.1167;MQ=74.02;MQ0=1;MQRankSum=0.753;QD=2.33;ReadPosRankSum=-1.165;VQSLOD=-0.6466;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,5:25:14.69:0,15,85	0/0:3,0:3:2.82:0,3,23	0/0:11,0:10:12.19:0,12,68	0/0:13,0:13:6.51:0,7,47	0/0:24,0:24:43.94:0,44,280	0/0:12,0:12:2.90:0,3,17	0/1:8,5:14:20.69:52,0,21	1/1:12,7:19:5.99:53,6,0	1/1:6,7:13:0.47:1,0,0	0/0:8,0:9:16.96:0,17,121	0/0:10,0:10:26.85:0,27,200	0/1:3,6:10:8.56:52,0,9	0/0:13,0:13:23.57:0,24,166	0/0:21,0:21:43.65:0,44,305	0/1:3,6:9:15.03:24,0,15	0/0:21,0:24:40.82:0,41,298	0/0:21,0:25:42.16:0,42,286	0/0:23,0:22:29.93:0,30,252	0/1:16,1:17:21.45:46,0,21	1/1:4,10:14:8.70:113,9,0	0/0:10,0:10:2.93:0,3,21	0/1:6,1:11:4.87:74,0,5	0/1:9,0:12:18.32:18,0,79	0/1:5,7:12:8.08:79,0,8	0/1:10,1:18:6.29:25,0,6	0/0:21,0:21:23.06:0,23,151	0/1:18,1:19:3.69:4,0,153	0/0:20,0:20:38.75:0,39,291
chr10	19074354	.	C	CT	2354.86	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-10.764;DP=649;FS=13.987;HRun=3;HaplotypeScore=59.4789;InbreedingCoeff=0.9996;MQ=81.70;MQ0=0;MQRankSum=-5.107;QD=35.68;ReadPosRankSum=2.751;VQSLOD=3.0492;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,46:48:99:1807,129,0	0/0:11,0:11:33.10:0,33,396	0/0:23,0:23:32.85:0,33,690	0/0:19,0:18:54.14:0,54,628	0/0:24,0:24:72.22:0,72,863	0/0:21,0:21:63.18:0,63,745	0/0:26,0:26:69.21:0,69,828	0/0:24,0:24:60.15:0,60,690	1/1:2,16:18:48.16:670,48,0	0/0:21,0:21:63.19:0,63,752	0/0:17,0:17:51.14:0,51,599	0/0:26,0:26:75.23:0,75,900	0/0:24,0:24:69.21:0,69,827	0/0:31,0:31:93.28:0,93,1113	0/0:22,0:21:66.20:0,66,792	0/0:18,0:17:51.16:0,51,611	0/0:29,0:29:81.23:0,81,959	0/0:27,0:27:81.25:0,81,970	0/0:11,0:11:33.10:0,33,396	0/0:28,0:28:78.24:0,78,935	0/0:29,0:29:84.23:0,84,984	0/0:17,0:17:51.16:0,51,611	0/0:20,0:20:51.16:0,51,611	0/0:34,0:34:99:0,99,1187	0/0:16,0:16:48.15:0,48,576	0/0:24,0:24:66.20:0,66,792	0/0:25,0:24:72.20:0,72,852	0/0:16,0:16:48.15:0,48,576
chr10	19078940	.	TA	T	11664.23	PASS	AB=0.563;AC=47;AF=0.839;AN=56;BaseQRankSum=4.937;DP=648;FS=12.528;HRun=10;HaplotypeScore=67.6134;InbreedingCoeff=0.9193;MQ=78.04;MQ0=0;MQRankSum=-3.430;QD=20.72;ReadPosRankSum=0.710;VQSLOD=5.0090;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,1:29:55.15:0,55,820	1/1:0,4:4:11.95:97,12,0	0/0:17,0:17:29.51:0,30,275	0/0:18,0:17:21.02:0,21,212	1/1:7,19:26:62.30:527,62,0	1/1:3,27:30:71.98:625,72,0	1/1:2,19:21:53.99:469,54,0	1/1:4,22:26:65.92:563,66,0	0/0:20,1:21:28.08:0,28,524	1/1:7,24:31:71.98:625,72,0	1/1:0,28:28:77.97:677,78,0	1/1:5,19:24:47.97:417,48,0	1/1:2,22:24:56.98:495,57,0	1/1:2,26:28:77.98:677,78,0	1/1:6,17:22:41.98:365,42,0	1/1:4,24:28:62.98:547,63,0	1/1:5,16:21:47.98:417,48,0	1/1:4,19:23:47.99:417,48,0	1/1:3,20:23:59.98:521,60,0	1/1:5,25:30:71.72:598,72,0	1/1:2,19:21:50.98:442,51,0	1/1:5,19:24:53.96:469,54,0	1/1:2,27:29:74.94:644,75,0	0/1:4,14:18:0.19:227,0,0	1/1:2,19:21:50.98:443,51,0	1/1:3,25:28:74.98:651,75,0	1/1:0,24:24:62.99:547,63,0	1/1:0,8:8:24:208,24,0
chr10	19079075	.	G	GC	2441.36	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-11.261;DP=630;FS=3.656;HRun=4;HaplotypeScore=59.1301;InbreedingCoeff=0.9965;MQ=87.02;MQ0=0;MQRankSum=-1.640;QD=36.99;ReadPosRankSum=3.112;VQSLOD=3.8794;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:60.17:0,60,681	0/0:6,0:6:18.05:0,18,204	0/0:20,0:20:50.89:0,51,532	0/0:23,0:23:42.86:0,43,577	0/0:31,0:31:93.27:0,93,1054	0/0:23,0:23:69.20:0,69,783	0/0:25,0:25:72.21:0,72,817	0/0:44,0:44:99:0,117,1320	0/0:20,0:20:57.16:0,57,647	0/0:22,0:22:60.17:0,60,681	0/0:25,0:25:72.20:0,72,817	0/0:13,0:13:36.10:0,36,408	0/0:19,0:19:57.16:0,57,647	0/0:35,0:35:99:0,105,1191	0/0:25,0:25:75.21:0,75,851	1/1:0,24:24:69.23:944,69,0	1/1:0,31:31:90.30:1230,90,0	1/1:1,10:11:30.10:410,30,0	0/0:32,0:32:72.20:0,72,809	0/0:22,0:22:63.16:0,63,705	0/0:18,0:18:51.14:0,51,578	0/0:26,0:26:78.18:0,78,855	0/0:27,0:27:81.22:0,81,908	0/0:16,0:16:48.12:0,48,533	0/0:23,0:23:69.18:0,69,773	0/0:20,0:20:60.14:0,60,656	0/0:20,0:20:60.17:0,60,680	0/0:9,0:9:27.08:0,27,306
chr10	19079416	.	GTT	G	26382.65	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=1.800;DP=803;FS=9.638;HRun=5;HaplotypeScore=106.2431;InbreedingCoeff=0.9989;MQ=65.99;MQ0=5;MQRankSum=-3.323;QD=35.51;ReadPosRankSum=7.408;VQSLOD=3.3078;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,52:53:99:1751,126,0	1/1:0,9:9:27.09:378,27,0	0/0:31,0:29:87.23:0,87,1481	0/0:29,0:23:66.21:0,66,1141	1/1:0,26:26:69.23:952,69,0	1/1:1,21:20:54.18:756,54,0	1/1:1,21:20:42.14:576,42,0	1/1:1,37:33:81.24:1098,81,0	1/1:2,33:35:93.24:1277,93,0	1/1:1,33:34:96.27:1304,96,0	1/1:1,22:23:56.59:784,57,0	1/1:2,35:36:96.32:1343,96,0	1/1:2,28:30:75.25:1049,75,0	1/1:0,26:26:72.24:1007,72,0	1/1:2,35:37:93.31:1301,93,0	1/1:2,38:40:99:1511,108,0	1/1:0,32:32:93.31:1301,93,0	1/1:0,15:15:42.14:588,42,0	1/1:2,20:22:51.13:714,51,0	1/1:2,18:20:57.19:780,57,0	1/1:2,30:31:81.27:1121,81,0	1/1:1,28:29:75.25:1037,75,0	1/1:0,31:29:81.27:1127,81,0	1/1:0,30:30:66.22:923,66,0	1/1:2,23:25:54.18:750,54,0	1/1:0,30:30:90.30:1258,90,0	1/1:1,33:34:96.25:1319,96,0	1/1:0,9:9:27.09:378,27,0
chr10	19080917	.	A	AT	17550.10	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-0.299;DP=708;FS=0.962;HRun=8;HaplotypeScore=151.7863;InbreedingCoeff=0.9961;MQ=72.57;MQ0=0;MQRankSum=-4.113;QD=28.08;ReadPosRankSum=-0.141;VQSLOD=2.8115;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:93.04:0,93,847	1/1:3,10:13:27.96:312,28,0	0/0:15,0:15:32.98:0,33,291	0/0:11,0:11:16.25:0,16,140	1/1:4,31:35:81.15:901,81,0	1/1:3,17:20:45.13:516,45,0	1/1:2,21:23:57.16:653,57,0	1/1:9,25:34:47.87:789,48,0	0/0:24,0:24:71.96:0,72,646	1/1:6,27:33:84.22:945,84,0	1/1:5,18:23:51.15:583,51,0	1/1:2,21:23:63.18:724,63,0	1/1:2,27:29:78.23:896,78,0	1/1:2,19:21:54.16:619,54,0	1/1:5,18:23:48.14:551,48,0	1/1:2,17:19:45.13:517,45,0	1/1:1,19:20:48.14:551,48,0	1/1:0,14:14:36.10:413,36,0	1/1:5,29:35:87.02:937,87,0	1/1:2,32:34:90.26:1033,90,0	1/1:7,20:27:66.19:755,66,0	1/1:2,19:21:57.17:655,57,0	1/1:2,30:32:84.24:962,84,0	1/1:1,21:22:48.14:551,48,0	1/1:1,38:39:99:1207,105,0	1/1:2,33:35:96.24:1078,96,0	1/1:2,35:37:93.27:1069,93,0	1/1:3,10:13:30.05:331,30,0
chr10	19081123	.	CTT	C	4991.46	PASS	AB=1.000;AC=41;AF=0.732;AN=56;BaseQRankSum=-3.307;DP=528;FS=3.773;HRun=15;HaplotypeScore=74.0052;InbreedingCoeff=0.8596;MQ=74.76;MQ0=0;MQRankSum=1.400;QD=12.57;ReadPosRankSum=6.695;VQSLOD=3.9289;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:26:69.59:0,70,777	1/1:2,6:10:14.54:117,15,0	0/0:20,0:17:24.76:0,25,199	0/1:10,0:6:11.07:11,0,25	1/1:6,13:23:15.86:216,16,0	1/1:1,13:15:32.71:276,33,0	1/1:4,12:20:35.49:293,35,0	1/1:14,12:27:38.27:320,38,0	0/0:5,0:14:27.02:0,27,289	1/1:6,13:20:40.14:332,40,0	1/1:4,15:20:29.72:308,30,0	1/1:7,11:20:31.08:259,31,0	1/1:6,16:23:17.65:305,18,0	1/1:7,12:21:23.26:182,23,0	1/1:6,11:17:17.82:158,18,0	0/0:3,0:19:15.03:0,15,163	0/0:7,0:31:33.50:0,33,318	0/0:13,0:17:43.87:0,44,442	1/1:7,8:18:25.18:214,25,0	1/1:6,11:18:26.46:223,26,0	1/1:7,12:19:32.76:290,33,0	1/1:6,18:24:38.73:343,39,0	1/1:7,9:16:23.20:183,23,0	1/1:2,8:10:11.94:106,12,0	1/1:3,12:18:32.38:262,32,0	1/1:8,14:24:16.19:285,16,0	1/1:4,13:22:43.24:308,43,0	0/0:3,0:3:0:0,0,0
chr10	19083065	.	A	ACT	3718.14	PASS	AB=0.981;AC=49;AF=0.875;AN=56;BaseQRankSum=2.403;DP=826;FS=13.338;HRun=0;HaplotypeScore=294.3738;InbreedingCoeff=0.4861;MQ=51.02;MQ0=7;MQRankSum=-2.298;QD=4.94;ReadPosRankSum=0.428;VQSLOD=1.4404;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:27:0.71:104,0,1	1/1:12,0:12:17.90:138,18,0	0/0:38,0:28:9.01:0,9,88	0/0:36,0:27:14.23:0,14,167	1/1:30,1:30:5.99:50,6,0	1/1:28,1:24:14.70:119,15,0	1/1:37,0:36:11.88:100,12,0	1/1:48,0:45:42.83:296,43,0	1/1:33,0:33:34.62:177,35,0	1/1:31,0:30:26.73:186,27,0	0/1:19,0:16:0:0,0,0	1/1:35,0:35:19.61:131,20,0	1/1:33,0:34:37.31:288,37,0	1/1:26,0:31:25.59:207,26,0	1/1:39,0:38:12.03:101,12,0	1/1:45,0:45:36.65:401,37,0	1/1:34,0:34:53.13:368,53,0	1/1:18,0:18:17.47:135,17,0	1/1:17,0:17:26.76:189,27,0	1/1:24,0:21:6.37:38,6,0	1/1:29,0:29:3:25,3,0	1/1:40,0:39:16.93:122,17,0	1/1:23,0:22:13.73:115,14,0	0/1:16,0:17:12.06:18,0,12	1/1:26,0:26:4.56:50,5,0	1/1:31,2:28:33.32:209,33,0	1/1:16,1:17:10.33:71,10,0	1/1:12,10:22:6.02:82,6,0
chr10	19083089	.	TCACACACACACACA	T	2812.04	PASS	AB=0.861;AC=20;AF=0.385;AN=52;BaseQRankSum=-2.169;DP=674;FS=26.710;HRun=0;HaplotypeScore=337.9697;InbreedingCoeff=-0.0504;MQ=36.66;MQ0=7;MQRankSum=-3.300;QD=6.76;ReadPosRankSum=-7.607;VQSLOD=0.2688;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:27:34.39:34,0,47	0/0:8,0:9:2.97:0,3,20	./.	./.	1/1:25,6:30:0.89:3,1,0	1/1:27,0:22:2.59:116,3,0	0/1:25,1:30:0.54:111,0,1	0/0:27,0:23:0:0,0,0	0/1:32,0:32:17.02:408,0,17	0/0:20,0:19:14.83:0,15,164	1/1:14,1:12:0.52:1,1,0	0/1:27,5:33:89.62:462,0,90	0/1:33,2:36:99:847,0,314	0/0:22,0:25:17.71:0,18,268	0/1:27,1:33:3.88:4,0,72	0/0:22,0:42:55.58:0,56,1479	0/0:26,0:33:35.71:0,36,884	0/0:10,0:11:14.66:0,15,237	0/0:14,0:14:3.01:0,3,42	1/1:21,0:19:0.47:1,0,0	1/1:19,0:19:0.89:2,1,0	0/1:30,5:39:99:100,0,126	0/0:16,2:19:6.02:0,6,145	0/0:13,1:13:6.49:0,6,166	0/1:14,2:20:16.38:16,0,281	0/1:26,3:26:99:514,0,188	0/1:11,1:16:65.58:325,0,66	0/0:15,0:15:6.02:0,6,115
chr10	19083471	.	G	GAT	2455.09	PASS	AB=1.000;AC=8;AF=0.143;AN=56;BaseQRankSum=-10.985;DP=718;FS=0.000;HRun=0;HaplotypeScore=93.1907;InbreedingCoeff=0.7186;MQ=79.57;MQ0=0;MQRankSum=0.681;QD=23.38;ReadPosRankSum=3.484;VQSLOD=4.1555;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:69.20:0,69,872	0/0:12,0:12:27.09:0,27,347	0/0:21,0:21:43.38:0,43,529	0/1:18,0:18:13.11:13,0,359	0/0:31,0:31:78.22:0,78,974	0/0:30,0:30:84.26:0,84,1066	0/0:21,0:21:51.15:0,51,642	0/0:33,0:33:75.23:0,75,953	0/0:26,0:26:66.19:0,66,822	0/0:34,0:34:81.26:0,81,1042	0/0:23,0:23:66.21:0,66,840	0/0:26,0:26:63.20:0,63,809	0/0:26,0:26:66.20:0,66,836	0/0:31,0:31:87.28:0,87,1117	0/0:44,0:44:99:0,117,1491	1/1:2,17:19:51.17:861,51,0	1/1:2,18:20:48.16:810,48,0	1/1:0,18:18:54.18:911,54,0	0/0:21,0:21:57.18:0,57,731	0/0:20,0:19:36.11:0,36,453	0/0:22,0:22:66.20:0,66,834	0/0:50,0:50:99:0,138,1769	0/0:24,0:24:60.19:0,60,771	0/0:13,0:13:39.13:0,39,502	0/0:29,0:29:75.24:0,75,961	0/0:21,0:21:57.19:0,57,733	0/1:30,0:30:13.34:13,0,848	0/0:28,0:28:78.25:0,78,995
chr10	19083748	.	T	TATCTATCC	12333.97	PASS	AB=1.000;AC=46;AF=0.821;AN=56;BaseQRankSum=1.922;DP=824;FS=2.999;HRun=0;HaplotypeScore=253.8883;InbreedingCoeff=0.6455;MQ=65.21;MQ0=3;MQRankSum=-4.220;QD=17.15;ReadPosRankSum=-1.019;VQSLOD=4.0028;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:37,0:37:44.68:478,45,0	1/1:3,9:15:3.01:111,3,0	0/0:43,0:36:27.35:0,27,1254	0/0:30,0:27:42.46:0,42,745	1/1:29,0:29:30.60:431,31,0	1/1:5,21:34:12.04:503,12,0	1/1:15,0:15:15.04:282,15,0	1/1:47,0:43:84.13:1679,84,0	1/1:20,0:20:35.86:376,36,0	1/1:1,22:29:69.98:1239,70,0	1/1:30,0:30:27.31:461,27,0	1/1:4,21:30:12.04:488,12,0	1/1:5,25:34:6.02:236,6,0	1/1:5,19:30:5.95:145,6,0	1/1:9,26:40:11.84:486,12,0	0/1:36,0:36:2.41:2,0,912	0/0:19,0:19:33.05:0,33,708	0/0:13,0:12:27.09:0,27,549	1/1:21,0:21:39.09:654,39,0	1/1:35,0:35:53.01:927,53,0	0/1:41,0:41:9.51:567,0,10	1/1:3,21:29:1.91:125,2,0	1/1:2,16:25:5.85:219,6,0	1/1:21,0:21:18.99:263,19,0	1/1:23,0:23:44.46:612,44,0	1/1:6,20:32:69.18:1403,69,0	1/1:4,23:43:12.04:500,12,0	1/1:5,16:22:5.98:146,6,0
chr10	19085084	.	GTTA	G	10944.04	PASS	AB=0.549;AC=31;AF=0.554;AN=56;BaseQRankSum=17.256;DP=609;FS=9.850;HRun=0;HaplotypeScore=177.5015;InbreedingCoeff=0.2266;MQ=62.63;MQ0=1;MQRankSum=-8.737;QD=26.56;ReadPosRankSum=6.577;VQSLOD=4.1544;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:90.31:0,90,2176	1/1:1,8:9:27.07:314,27,0	0/0:26,0:24:72.25:0,72,1709	0/0:27,0:25:75.22:0,75,1721	0/1:1,16:17:71.48:270,0,71	0/1:3,18:21:99:383,0,109	0/1:3,17:20:43.80:412,0,44	0/1:5,13:18:18.50:382,0,18	0/0:28,0:28:84.29:0,84,2022	1/1:1,22:23:69.18:802,69,0	0/1:3,12:15:21.35:280,0,21	1/1:1,25:26:75.20:857,75,0	1/1:3,30:34:65.37:1072,65,0	1/1:1,17:18:39.05:575,39,0	1/1:2,32:34:55.77:1094,56,0	0/0:31,0:31:93.32:0,93,2288	0/0:27,0:27:81.28:0,81,1922	0/0:28,0:28:84.29:0,84,2028	0/1:4,15:17:4.84:416,0,5	0/1:2,14:16:45.69:357,0,46	0/1:3,19:22:72.85:381,0,73	1/1:1,14:15:20.23:467,20,0	0/1:2,9:11:15.31:221,0,15	0/1:4,21:25:13.05:589,0,13	1/1:1,13:14:42.12:499,42,0	1/1:0,15:15:23.28:489,23,0	1/1:2,28:30:23.91:873,24,0	0/1:3,7:10:28.82:211,0,29
chr10	19085088	.	GA	G	6090.06	PASS	AB=0.552;AC=31;AF=0.554;AN=56;BaseQRankSum=18.946;DP=630;FS=15.535;HRun=1;HaplotypeScore=175.8123;InbreedingCoeff=0.2285;MQ=60.46;MQ0=1;MQRankSum=-9.110;QD=14.26;ReadPosRankSum=7.340;VQSLOD=2.7430;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:99:0,99,1548	1/1:0,8:8:23.80:176,24,0	0/0:26,0:24:72.25:0,72,1148	0/0:29,0:25:75.25:0,75,1180	0/1:1,16:17:74.30:131,0,74	0/1:2,18:20:64.95:196,0,65	0/1:2,17:19:60.16:191,0,60	0/1:7,13:20:44.09:202,0,44	0/0:29,0:29:87.28:0,87,1366	1/1:4,22:26:56.40:466,56,0	0/1:4,12:16:31.77:138,0,32	1/1:1,25:26:62.14:492,62,0	1/1:5,30:35:55.28:603,55,0	1/1:1,17:18:37.71:336,38,0	1/1:4,32:36:44.54:669,45,0	0/0:31,0:31:93.32:0,93,1485	0/0:27,0:27:78.23:0,78,1216	0/0:28,0:28:84.29:0,84,1332	0/1:7,15:20:3.62:239,0,4	0/1:3,14:17:64.96:201,0,65	0/1:4,19:23:76.02:189,0,76	1/1:1,14:15:15.76:274,16,0	0/1:3,9:12:33.57:101,0,34	0/1:4,21:25:11.67:321,0,12	1/1:2,13:15:29.13:288,29,0	1/1:2,15:17:8.20:275,8,0	0/1:2,28:30:7.31:461,0,7	1/1:3,7:10:20.76:143,21,0
chr10	19085471	.	TAGAACTCTC	T	26942.42	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=14.232;DP=597;FS=0.000;HRun=0;HaplotypeScore=169.3837;InbreedingCoeff=0.9018;MQ=44.09;MQ0=11;MQRankSum=-12.333;QD=58.44;ReadPosRankSum=-2.959;VQSLOD=4.2186;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,27:28:63.22:1868,63,0	1/1:1,11:12:27.09:837,27,0	0/0:15,0:3:9.03:0,9,331	0/0:25,0:3:6.02:0,6,290	1/1:4,6:10:6.02:165,6,0	1/1:5,17:22:48.16:1481,48,0	1/1:5,28:33:60.21:1846,60,0	1/1:8,21:23:54.17:1391,54,0	1/1:3,20:23:48.16:1478,48,0	1/1:4,19:22:51.17:1484,51,0	1/1:1,9:10:21.07:605,21,0	1/1:0,25:25:57.20:1752,57,0	1/1:2,23:25:54.19:1649,54,0	1/1:1,23:24:63.22:1908,63,0	1/1:2,26:27:63.22:1911,63,0	0/0:27,0:27:81.28:0,81,3818	0/0:39,0:39:99:0,111,5348	0/0:30,0:30:84.29:0,84,3706	1/1:10,17:23:51.12:1365,51,0	1/1:2,13:15:27.09:820,27,0	1/1:3,19:21:21.07:641,21,0	1/1:1,10:11:18.06:545,18,0	1/1:2,9:9:18.06:558,18,0	1/1:6,18:25:12.18:372,12,0	1/1:1,14:15:30.10:914,30,0	1/1:0,16:16:48.16:1443,48,0	1/1:0,23:24:56.78:1723,57,0	1/1:0,3:3:6.02:186,6,0
chr10	19087738	.	TAC	T	25166.99	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-5.780;DP=694;FS=0.000;HRun=0;HaplotypeScore=102.2884;InbreedingCoeff=0.9987;MQ=80.19;MQ0=1;MQRankSum=-8.958;QD=38.13;ReadPosRankSum=6.130;VQSLOD=6.3745;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,53:55:99:2106,147,0	1/1:0,8:8:24.08:344,24,0	0/0:19,0:19:51.09:0,51,772	0/0:15,0:15:42.10:0,42,707	1/1:0,26:26:78.26:1117,78,0	1/1:1,20:21:45.15:645,45,0	1/1:0,29:29:84.28:1204,84,0	1/1:1,21:22:63.20:885,63,0	1/1:2,18:20:54.03:774,54,0	1/1:0,29:29:87.29:1243,87,0	1/1:0,17:17:35.35:515,35,0	1/1:1,43:43:99:1590,111,0	1/1:0,33:33:87.29:1247,87,0	1/1:0,25:25:63.21:903,63,0	1/1:2,29:31:78.26:1118,78,0	1/1:2,25:27:75.25:1075,75,0	1/1:3,30:33:75.25:1075,75,0	1/1:0,24:24:66.22:946,66,0	1/1:1,16:17:48.16:688,48,0	1/1:0,17:17:51.17:731,51,0	1/1:3,32:35:90.30:1290,90,0	1/1:2,20:22:54.18:774,54,0	1/1:1,19:20:54.18:774,54,0	1/1:0,23:23:66.22:946,66,0	1/1:1,13:14:39.13:559,39,0	1/1:1,28:29:84.22:1161,84,0	1/1:0,28:28:69.22:988,69,0	1/1:0,11:11:33.11:473,33,0
chr10	19088035	.	AATGGTCCTCAGTGGGCAAGC	A	7101.70	PASS	AB=0.554;AC=5;AF=0.089;AN=56;BaseQRankSum=10.333;DP=777;FS=1.238;HRun=0;HaplotypeScore=399.7316;InbreedingCoeff=0.7765;MQ=76.00;MQ0=0;MQRankSum=-10.429;QD=107.60;ReadPosRankSum=2.104;VQSLOD=3.7722;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:57:99:0,169,14463	0/0:9,0:9:27.09:0,27,2151	0/0:22,0:22:59.52:0,60,3606	0/0:19,0:19:57.16:0,57,2837	0/0:20,0:20:60.21:0,60,5527	0/0:31,0:31:90.31:0,90,8053	0/0:23,0:23:69.24:0,69,5921	0/0:22,0:22:66.22:0,66,5424	0/0:41,0:41:99:0,120,11161	0/0:33,0:32:99:0,99,7337	0/0:17,0:17:51.18:0,51,4438	0/0:36,0:36:99:0,108,9851	0/0:30,0:30:90.31:0,90,8026	0/0:34,0:34:99:0,102,8830	0/0:41,0:41:99:0,123,11655	0/1:6,25:31:99:4024,0,506	1/1:1,17:18:33.11:1876,33,0	1/1:6,11:17:21.07:1202,21,0	0/0:27,0:27:78.27:0,78,5748	0/0:27,0:27:81.28:0,81,6739	0/0:62,0:62:99:0,187,15913	0/0:16,0:16:48.15:0,48,3840	0/0:27,0:27:81.28:0,81,6757	0/0:27,0:27:81.28:0,81,7261	0/0:20,0:20:60.21:0,60,5506	0/0:29,0:29:84.29:0,84,7159	0/0:34,0:33:99:0,99,8459	0/0:7,0:7:21.07:0,21,1893
chr10	19088273	.	A	AT	11825.36	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-4.261;DP=595;FS=14.426;HRun=10;HaplotypeScore=62.2109;InbreedingCoeff=0.8768;MQ=77.15;MQ0=0;MQRankSum=-4.204;QD=21.19;ReadPosRankSum=2.558;VQSLOD=4.6882;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,3:30:62.93:350,63,0	1/1:1,7:8:21.05:223,21,0	0/0:20,0:18:14.92:0,15,123	0/0:16,0:14:10.77:0,11,79	1/1:9,28:37:75.19:799,75,0	1/1:5,12:17:33.08:347,33,0	1/1:2,11:13:27.07:288,27,0	1/1:16,15:32:44.87:440,45,0	1/1:8,0:18:34.38:184,34,0	1/1:3,25:28:69.14:718,69,0	1/1:2,17:19:51.09:531,51,0	1/1:4,20:24:29.48:511,29,0	1/1:4,16:20:45.11:480,45,0	1/1:4,16:20:45.11:480,45,0	1/1:4,19:23:45.11:480,45,0	1/1:2,1:17:34.32:189,34,0	1/1:1,2:18:37.30:221,37,0	1/1:2,3:20:43.22:254,43,0	1/1:7,13:20:40.93:403,41,0	1/1:2,28:30:78.15:813,78,0	1/1:5,12:17:36.09:381,36,0	1/1:3,8:11:2.42:231,2,0	1/1:2,17:19:45.11:479,45,0	1/1:3,15:18:39.10:416,39,0	1/1:3,26:29:56.56:806,57,0	1/1:4,20:24:60.13:630,60,0	1/1:4,27:30:78.16:819,78,0	1/1:4,11:15:33.08:352,33,0
chr10	19088564	.	T	TA	13841.19	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-5.348;DP=618;FS=13.234;HRun=8;HaplotypeScore=98.4624;InbreedingCoeff=0.9700;MQ=72.48;MQ0=0;MQRankSum=-4.671;QD=25.97;ReadPosRankSum=0.891;VQSLOD=4.0034;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:75.63:0,76,346	1/1:0,7:7:21.02:226,21,0	0/0:15,0:13:29.24:0,29,266	0/0:17,0:15:11.35:0,11,194	1/1:4,23:27:66.19:753,66,0	1/1:2,16:18:24.56:430,25,0	1/1:1,12:13:33.09:378,33,0	1/1:8,25:35:68.72:875,69,0	0/0:22,0:22:30.02:0,30,223	1/1:5,28:33:84.05:889,84,0	1/1:3,20:23:60.11:663,60,0	1/1:5,16:21:42.11:473,42,0	1/1:5,17:22:48.14:551,48,0	1/1:3,15:18:45.08:501,45,0	1/1:5,16:21:34.03:472,34,0	1/1:1,17:18:48.14:551,48,0	1/1:6,24:30:57.22:745,57,0	1/1:1,24:25:57.22:746,57,0	1/1:4,14:18:42.05:447,42,0	1/1:4,15:19:45.05:488,45,0	1/1:2,9:11:9.08:195,9,0	1/1:2,11:14:35.89:379,36,0	1/1:2,20:23:46.27:610,46,0	1/1:1,19:20:45.13:517,45,0	1/1:6,30:36:84.23:954,84,0	1/1:5,21:26:43.19:697,43,0	1/1:8,27:35:52.53:800,53,0	1/1:6,14:20:18.58:504,19,0
chr10	19089387	.	AC	A	19357.62	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=12.703;DP=792;FS=4.299;HRun=3;HaplotypeScore=80.6413;InbreedingCoeff=0.9983;MQ=86.83;MQ0=0;MQRankSum=-4.896;QD=33.90;ReadPosRankSum=3.685;VQSLOD=5.4773;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,105,1466	1/1:0,9:9:27.08:334,27,0	0/0:32,0:32:87.29:0,87,1241	0/0:22,0:23:59.78:0,60,799	1/1:2,34:36:99:1224,102,0	1/1:0,23:23:66.21:818,66,0	1/1:0,23:23:63.20:780,63,0	1/1:1,30:31:87.25:1054,87,0	0/0:28,0:28:81.21:0,81,1075	1/1:0,38:38:99:1411,114,0	1/1:0,25:25:72.18:874,72,0	1/1:0,29:29:84.26:1039,84,0	1/1:2,33:35:99:1222,99,0	1/1:0,19:19:45.14:557,45,0	1/1:0,40:40:99:1412,114,0	0/0:31,0:31:93.31:0,93,1338	0/0:38,0:38:99:0,114,1600	0/0:32,0:32:93.31:0,93,1336	1/1:0,28:28:84.18:982,84,0	1/1:1,29:30:81.22:987,81,0	1/1:1,29:30:75.24:929,75,0	1/1:3,25:28:75.23:916,75,0	1/1:1,21:22:54.10:668,54,0	1/1:0,25:25:60.19:743,60,0	1/1:1,18:19:45.14:558,45,0	1/1:0,28:28:84.25:1027,84,0	1/1:0,47:47:99:1597,129,0	1/1:0,6:6:18.06:223,18,0
chr10	19090006	.	G	GT	23354.36	PASS	AB=1.000;AC=47;AF=0.940;AN=50;BaseQRankSum=-4.082;DP=549;FS=3.854;HRun=0;HaplotypeScore=62.6622;InbreedingCoeff=0.5897;MQ=72.10;MQ0=0;MQRankSum=-4.827;QD=42.85;ReadPosRankSum=3.031;VQSLOD=5.5409;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,50:50:99:2109,132,0	1/1:0,8:8:21.07:335,21,0	0/0:4,0:4:9.03:0,9,124	0/1:13,0:14:61.92:62,0,68	1/1:0,27:27:69.24:1102,69,0	1/1:0,26:26:75.26:1198,75,0	1/1:0,14:14:36.09:575,36,0	1/1:0,27:27:81.26:1272,81,0	1/1:0,22:22:57.19:911,57,0	1/1:1,25:26:78.25:1206,78,0	1/1:0,18:18:51.11:785,51,0	1/1:0,22:22:63.21:1007,63,0	1/1:0,21:21:57.19:911,57,0	1/1:0,31:31:84.04:1341,84,0	1/1:1,31:32:78.27:1247,78,0	./.	./.	./.	1/1:0,18:18:54.18:864,54,0	1/1:0,14:14:39.13:623,39,0	1/1:0,29:29:84.22:1313,84,0	1/1:1,14:15:39.13:623,39,0	1/1:0,15:15:42.14:671,42,0	1/1:0,32:32:87.30:1390,87,0	1/1:0,27:27:69.24:1102,69,0	1/1:0,25:24:75.23:1174,75,0	1/1:0,21:21:63.21:1006,63,0	1/1:0,11:11:33.11:527,33,0
chr10	19091799	.	TGTGTGTGTGTGTGTGTGTGTGTGTGC	T	8055.96	PASS	AB=0.960;AC=29;AF=0.518;AN=56;BaseQRankSum=9.181;DP=605;FS=4.686;HRun=0;HaplotypeScore=295.1588;InbreedingCoeff=-0.0906;MQ=50.16;MQ0=28;MQRankSum=-2.801;QD=18.39;ReadPosRankSum=4.186;VQSLOD=3.1889;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:33:65.85:0,66,5020	0/1:3,0:3:0.45:0,0,38	0/0:15,0:3:3.01:0,3,44	0/0:16,0:3:9.03:0,9,276	1/1:22,0:22:0.42:164,0,0	1/1:11,0:9:3.01:150,3,0	0/1:27,0:27:99:285,0,119	0/1:15,0:15:70.99:71,0,106	0/0:24,0:24:27.09:0,27,1990	0/1:24,0:23:83.44:529,0,83	0/1:26,0:26:36.75:576,0,37	1/1:19,0:19:6.02:260,6,0	0/1:20,1:20:56.59:409,0,57	0/1:37,2:39:3.80:1476,0,4	0/1:31,0:31:28.93:613,0,29	0/0:19,0:19:24.08:0,24,1389	0/0:34,0:30:58.07:0,58,4519	0/0:23,0:23:38.16:0,38,2416	0/1:13,0:11:99:149,0,141	0/1:24,0:24:31.53:279,0,32	0/1:41,0:38:18.97:142,0,19	1/1:17,0:16:6.02:300,6,0	1/1:16,0:15:2.47:149,2,0	1/1:27,2:28:0.16:439,0,0	1/1:20,0:19:6.02:299,6,0	1/1:22,1:22:2.54:799,3,0	0/1:10,2:10:35.18:657,0,35	0/1:3,2:4:12.90:310,0,13
chr10	19091801	.	TGTGTGTGTGTGTGTGTGTGTGTGC	T	10656.01	PASS	AB=0.864;AC=41;AF=0.759;AN=54;BaseQRankSum=7.745;DP=595;FS=4.042;HRun=0;HaplotypeScore=264.1409;InbreedingCoeff=0.5528;MQ=49.91;MQ0=30;MQRankSum=-2.211;QD=23.89;ReadPosRankSum=1.000;VQSLOD=2.9037;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:33:16.96:0,17,4290	1/1:5,0:5:8.96:95,9,0	./.	0/1:18,0:4:4.95:5,0,186	1/1:8,14:22:9.03:216,9,0	1/1:3,9:10:3.01:196,3,0	0/1:8,18:26:45.43:382,0,45	1/1:5,9:14:26.89:327,27,0	0/0:23,0:23:27.09:0,27,1762	1/1:11,15:24:42.41:689,42,0	1/1:6,20:26:20.93:873,21,0	1/1:6,12:18:6.02:332,6,0	1/1:17,1:17:17.39:537,17,0	1/1:17,20:37:29.77:1732,30,0	1/1:10,20:30:11.65:751,12,0	0/0:19,0:19:24.08:0,24,1175	0/0:34,0:30:57.76:0,58,3918	0/0:23,0:23:37.94:0,38,2103	0/1:12,0:10:20.02:221,0,20	1/1:23,0:24:8.83:283,9,0	1/1:13,27:37:5.98:216,6,0	1/1:4,13:16:6.02:391,6,0	1/1:5,9:13:2.47:195,2,0	1/1:28,1:28:23.26:563,23,0	1/1:5,14:18:6.02:391,6,0	1/1:7,16:22:50.49:1146,50,0	1/1:10,1:9:23.94:784,24,0	1/1:4,1:4:6.02:331,6,0
chr10	19091805	.	TGTGTGTGTGTGTGTGTGTGC	T	8431.17	PASS	AB=1.000;AC=44;AF=0.786;AN=56;BaseQRankSum=7.622;DP=487;FS=2.564;HRun=0;HaplotypeScore=193.4744;InbreedingCoeff=0.5809;MQ=52.29;MQ0=28;MQRankSum=-1.519;QD=22.54;ReadPosRankSum=0.845;VQSLOD=4.0735;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:36,0:33:4.14:4,0,3029	1/1:3,0:3:7.77:49,8,0	0/0:13,0:1:2.80:0,3,13	0/1:13,0:3:10.97:11,0,49	1/1:16,0:16:8.80:135,9,0	1/1:11,0:9:3.01:148,3,0	1/1:21,0:21:5.98:296,6,0	1/1:9,0:9:21.81:155,22,0	0/0:23,0:23:27.09:0,27,1306	1/1:21,0:19:47.64:637,48,0	1/1:21,0:21:17.63:626,18,0	1/1:13,0:13:6.02:296,6,0	1/1:11,0:10:23.44:470,23,0	1/1:23,0:23:27.09:1331,27,0	1/1:21,0:21:11.51:580,12,0	0/0:19,0:19:17.93:0,18,789	0/0:35,0:32:30.06:0,30,2688	0/0:23,0:23:34.36:0,34,1500	1/1:7,1:8:8.94:245,9,0	1/1:3,17:20:8.68:327,9,0	1/1:31,0:28:5.98:168,6,0	1/1:14,0:13:6.02:296,6,0	1/1:9,0:9:2.78:148,3,0	1/1:21,0:20:19.99:401,20,0	1/1:16,0:15:6.02:296,6,0	1/1:22,0:21:50.57:906,51,0	1/1:10,0:8:21.40:652,21,0	1/1:4,0:3:6.02:255,6,0
chr10	19091817	.	TGTGTGTGC	T	5473.32	PASS	AB=0.920;AC=49;AF=0.875;AN=56;BaseQRankSum=2.921;DP=476;FS=3.842;HRun=0;HaplotypeScore=140.8092;InbreedingCoeff=0.0613;MQ=58.54;MQ0=22;MQRankSum=-1.259;QD=11.70;ReadPosRankSum=0.979;VQSLOD=3.8560;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:34,1:32:99:280,0,194	1/1:2,0:2:5.95:44,6,0	0/0:8,0:2:5.80:0,6,44	0/1:16,0:7:7.93:8,0,36	1/1:15,0:15:8.63:51,9,0	1/1:11,0:9:3.01:64,3,0	1/1:20,0:20:5.98:128,6,0	1/1:14,0:14:32.87:280,33,0	0/1:24,0:24:7.74:8,0,97	1/1:21,0:19:49.74:471,50,0	1/1:21,0:21:17.89:291,18,0	1/1:13,0:13:6.02:129,6,0	1/1:12,0:11:26.93:293,27,0	1/1:22,0:22:27.09:577,27,0	1/1:21,0:21:12.04:245,12,0	0/1:17,0:17:15.84:97,0,16	1/1:28,0:26:6.24:356,6,0	0/1:9,13:22:66.67:82,0,67	1/1:8,0:7:20.90:203,21,0	1/1:19,0:19:8.96:140,9,0	1/1:31,0:28:5.98:84,6,0	1/1:14,0:13:6.02:129,6,0	1/1:9,0:9:2.99:64,3,0	1/1:22,0:21:23.58:274,24,0	1/1:15,0:14:6.02:128,6,0	1/1:20,0:20:50.76:567,51,0	1/1:12,0:10:29.92:390,30,0	1/1:4,0:3:6:88,6,0
chr10	19091819	.	TGTGTGC	T	5485.96	PASS	AB=1.000;AC=52;AF=0.929;AN=56;BaseQRankSum=0.664;DP=471;FS=1.270;HRun=0;HaplotypeScore=131.2815;InbreedingCoeff=0.1557;MQ=60.98;MQ0=19;MQRankSum=-0.323;QD=11.85;ReadPosRankSum=2.886;VQSLOD=3.7128;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:34,0:32:28.95:418,0,29	1/1:2,0:2:5.95:44,6,0	0/0:8,0:2:5.80:0,6,44	0/1:18,0:9:10.27:10,0,34	1/1:15,0:15:7.04:40,7,0	1/1:11,0:9:3.01:50,3,0	1/1:20,0:20:6.02:101,6,0	1/1:15,0:15:35.87:308,36,0	1/1:22,1:23:8.49:91,8,0	1/1:20,0:19:50.11:444,50,0	1/1:21,0:21:17.89:235,18,0	1/1:13,0:13:6.02:101,6,0	1/1:13,0:12:29.93:290,30,0	1/1:22,0:22:27.09:452,27,0	1/1:21,0:21:12.04:190,12,0	1/1:4,12:16:6.02:118,6,0	1/1:26,0:24:55.54:686,56,0	1/1:20,0:20:7.75:132,8,0	1/1:8,0:7:20.90:189,21,0	1/1:19,0:19:8.96:113,9,0	1/1:31,0:28:5.98:70,6,0	1/1:14,0:13:6.02:101,6,0	1/1:9,0:9:3.01:50,3,0	1/1:22,0:21:23.67:247,24,0	1/1:15,0:14:6.02:101,6,0	1/1:20,0:20:50.80:511,51,0	1/1:11,0:10:29.92:335,30,0	1/1:4,0:3:5.61:60,6,0
chr10	19091821	.	TGTGC	T	4895.60	PASS	AB=1.000;AC=53;AF=0.946;AN=56;BaseQRankSum=0.324;DP=465;FS=0.000;HRun=0;HaplotypeScore=123.3110;InbreedingCoeff=0.2137;MQ=61.16;MQ0=18;MQRankSum=-0.658;QD=10.71;ReadPosRankSum=2.414;VQSLOD=4.1965;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:33,0:31:69.93:642,70,0	1/1:2,0:2:5.95:44,6,0	0/0:8,0:2:5.80:0,6,44	0/1:18,0:9:10.27:10,0,34	1/1:15,0:15:5.79:37,6,0	1/1:11,0:9:3.01:36,3,0	1/1:19,0:19:6.02:73,6,0	1/1:15,0:15:35.87:308,36,0	1/1:4,17:21:9.03:147,9,0	1/1:20,0:19:50.61:417,51,0	1/1:21,0:21:17.88:180,18,0	1/1:13,0:13:6.02:73,6,0	1/1:13,0:12:29.92:262,30,0	1/1:22,0:22:27.08:326,27,0	1/1:21,0:21:12.01:134,12,0	1/1:15,0:15:6.02:72,6,0	1/1:26,0:26:61.33:559,61,0	1/1:18,0:18:8.07:86,8,0	1/1:8,0:7:20.90:175,21,0	1/1:19,0:19:8.96:85,9,0	1/1:31,0:28:5.98:56,6,0	1/1:14,0:13:6.02:73,6,0	1/1:9,0:9:3:37,3,0	1/1:22,0:21:23.66:219,24,0	1/1:15,0:14:6.02:73,6,0	1/1:20,0:20:50.83:455,51,0	1/1:11,0:10:29.92:279,30,0	1/1:4,0:3:3.48:38,3,0
chr10	19092811	.	GA	G	1165.11	PASS	AC=32;AF=0.842;AN=38;BaseQRankSum=-1.007;DP=96;FS=14.393;HRun=2;HaplotypeScore=22.8694;InbreedingCoeff=0.4263;MQ=59.03;MQ0=1;MQRankSum=-1.915;QD=19.10;ReadPosRankSum=0.043;VQSLOD=1.7727;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,8:9:15.04:178,15,0	1/1:1,1:2:3.01:39,3,0	0/0:9,0:3:6.02:0,6,90	0/0:7,0:8:17.82:0,18,199	./.	1/1:0,2:2:2.74:12,3,0	./.	./.	./.	1/1:0,7:7:15.05:185,15,0	./.	1/1:2,2:4:6.02:77,6,0	./.	1/1:0,1:1:3.01:39,3,0	1/1:0,3:3:3.01:39,3,0	./.	1/1:0,3:3:6.02:70,6,0	1/1:0,3:3:6.02:74,6,0	1/1:0,3:3:9.01:95,9,0	1/1:0,1:1:3.01:38,3,0	1/1:0,4:4:6.02:78,6,0	1/1:0,4:3:3.01:39,3,0	./.	1/1:0,7:7:6.02:77,6,0	./.	1/1:0,5:5:12.02:134,12,0	1/1:0,3:3:9.03:108,9,0	0/0:1,0:1:2.90:0,3,16
chr10	19093383	.	GCA	G	114.22	PASS	AB=0.843;AC=13;AF=0.382;AN=34;BaseQRankSum=-0.344;DP=76;FS=1.771;HRun=0;HaplotypeScore=33.5178;InbreedingCoeff=0.2216;MQ=90.02;MQ0=2;MQRankSum=-2.691;QD=4.08;ReadPosRankSum=-2.671;VQSLOD=1.3679;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,1:4:5.35:38,5,0	1/1:1,0:1:2.04:6,2,0	0/0:10,0:5:11.46:0,11,143	0/0:11,0:11:11.59:0,12,304	./.	./.	1/1:1,0:1:2.97:20,3,0	0/1:6,2:6:1.86:72,0,2	0/1:4,0:4:8.03:8,0,22	./.	0/1:1,1:2:24.38:33,0,24	./.	./.	./.	0/1:2,1:3:15.92:31,0,16	0/0:7,0:7:8.21:0,8,174	0/0:8,0:8:22.51:0,23,197	0/0:3,0:3:8.89:0,9,60	./.	./.	0/1:3,0:3:0.01:0,0,0	./.	0/0:1,0:1:2.94:0,3,18	0/0:2,0:2:1.72:0,2,4	1/1:2,0:2:2.96:19,3,0	./.	./.	0/0:1,0:1:2.60:0,3,10
chr10	19093789	.	GA	G	3228.29	PASS	AB=0.691;AC=45;AF=0.804;AN=56;BaseQRankSum=2.001;DP=462;FS=9.201;HRun=14;HaplotypeScore=58.1793;InbreedingCoeff=0.1064;MQ=63.77;MQ0=14;MQRankSum=1.853;QD=7.51;ReadPosRankSum=4.338;VQSLOD=1.9583;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:18,3:21:15.17:15,0,262	1/1:2,0:2:2.96:20,3,0	0/1:28,0:13:5.75:6,0,77	0/0:18,0:6:5.05:0,5,44	0/1:7,14:22:36.42:184,0,36	0/1:3,12:15:4.03:120,0,4	0/1:8,12:18:6.74:181,0,7	1/1:5,14:19:18.94:245,19,0	0/0:13,1:14:3.45:0,3,174	1/1:3,13:16:28.32:227,28,0	0/1:5,14:21:1.79:220,0,2	1/1:9,7:16:29.70:202,30,0	1/1:5,6:12:28.76:187,29,0	1/1:4,10:14:14.83:103,15,0	1/1:7,8:15:4.71:170,5,0	1/1:6,0:14:18.33:54,18,0	1/1:7,0:25:24.43:72,24,0	1/1:6,0:27:33.40:106,33,0	1/1:11,9:17:2.92:138,3,0	1/1:8,7:14:26.65:182,27,0	1/1:4,7:11:11.86:82,12,0	1/1:3,5:8:13.96:98,14,0	1/1:7,11:20:22.35:136,22,0	1/1:3,8:11:14.87:103,15,0	1/1:1,7:9:19.02:127,19,0	1/1:4,9:14:0.92:139,1,0	0/1:6,10:16:4.66:108,0,5	1/1:2,12:15:0.96:142,1,0
chr10	19093850	.	A	AAGAGAGAGAG	906.94	PASS	AB=1.000;AC=6;AF=0.107;AN=56;BaseQRankSum=-3.564;DP=520;FS=1.984;HRun=0;HaplotypeScore=227.0457;InbreedingCoeff=0.5405;MQ=65.39;MQ0=8;MQRankSum=-0.986;QD=15.64;ReadPosRankSum=-4.736;VQSLOD=1.8445;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:16,3:17:9:300,9,0	0/0:2,0:2:6.02:0,6,115	0/0:27,0:21:57.20:0,57,1755	0/0:25,0:17:44.49:0,44,1122	0/0:27,0:27:72.23:0,72,1309	0/1:10,0:10:6.93:7,0,276	0/0:15,0:14:26.76:0,27,507	0/0:26,0:23:13.06:0,13,611	1/1:5,15:20:15.05:697,15,0	0/0:28,0:26:69.05:0,69,1190	0/0:14,0:14:4.11:0,4,475	0/0:21,0:20:39.12:0,39,680	0/0:20,0:20:20.11:0,20,590	0/0:14,0:14:33.11:0,33,593	0/0:19,0:19:42.14:0,42,818	0/0:19,0:19:19.44:0,19,856	0/0:24,0:24:43.48:0,43,1132	0/0:28,0:27:49.25:0,49,1264	0/1:8,0:8:28.09:28,0,98	0/0:21,0:21:24.92:0,25,782	0/0:15,0:14:27.09:0,27,497	0/0:16,0:16:36.10:0,36,664	0/0:15,0:15:29.05:0,29,540	0/0:12,0:11:15.02:0,15,241	0/0:20,0:20:33.77:0,34,790	0/0:22,0:20:51.17:0,51,940	0/0:17,0:17:39.13:0,39,758	0/0:15,0:15:39.13:0,39,755
chr10	19093853	.	AGT	A	3440.62	PASS	AB=0.727;AC=45;AF=0.900;AN=50;BaseQRankSum=-3.363;DP=513;FS=9.438;HRun=0;HaplotypeScore=137.2830;InbreedingCoeff=0.4710;MQ=61.65;MQ0=13;MQRankSum=2.588;QD=8.56;ReadPosRankSum=-1.132;VQSLOD=2.3800;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:18:0.06:0,0,0	1/1:2,0:2:3.01:33,3,0	./.	./.	1/1:14,7:27:32.72:312,33,0	1/1:8,0:9:5.48:27,5,0	1/1:6,0:14:4.17:20,4,0	./.	0/0:22,0:21:14.49:0,14,100	1/1:20,8:27:30.07:323,30,0	1/1:12,2:16:14.86:137,15,0	1/1:8,0:15:19.78:98,20,0	1/1:9,0:17:16.88:81,17,0	0/1:10,0:16:1.59:29,0,2	1/1:5,0:18:17.04:84,17,0	1/1:3,13:18:44.77:443,45,0	1/1:10,16:26:51.02:515,51,0	1/1:16,10:26:19.75:413,20,0	1/1:9,0:8:1.25:3,1,0	1/1:13,0:20:4.09:17,4,0	0/0:14,0:14:2.74:0,3,12	1/1:5,0:17:14.20:70,14,0	1/1:10,0:15:2.84:14,3,0	1/1:9,0:10:2.81:14,3,0	1/1:3,0:17:22.73:111,23,0	1/1:16,4:18:14.87:145,15,0	1/1:6,10:16:27.07:296,27,0	1/1:8,7:16:26.74:258,27,0
chr10	19096645	.	G	GC	2331.80	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-11.285;DP=758;FS=2.291;HRun=3;HaplotypeScore=77.6616;InbreedingCoeff=0.9985;MQ=89.72;MQ0=0;MQRankSum=-5.338;QD=35.87;ReadPosRankSum=1.323;VQSLOD=4.3186;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,120,1436	0/0:10,0:10:21.06:0,21,251	0/0:33,0:33:55.51:0,56,958	0/0:23,0:23:57.17:0,57,683	0/0:20,0:20:57.17:0,57,683	0/0:14,0:14:39.12:0,39,468	0/0:32,0:32:96.25:0,96,1115	0/0:25,0:25:69.20:0,69,819	0/0:33,0:33:99:0,99,1174	0/0:28,0:28:78.21:0,78,909	0/0:22,0:22:63.19:0,63,756	0/0:25,0:25:75.23:0,75,899	0/0:43,0:43:99:0,123,1464	0/0:26,0:26:72.22:0,72,864	0/0:30,0:30:81.22:0,81,958	1/1:1,18:19:51.17:714,51,0	1/1:0,26:26:69.23:966,69,0	1/1:1,19:20:57.19:794,57,0	0/0:30,0:30:81.25:0,81,972	0/0:24,0:23:69.18:0,69,814	0/0:48,0:48:99:0,141,1692	0/0:21,0:21:60.18:0,60,719	0/0:13,0:13:36.11:0,36,432	0/0:45,0:45:99:0,132,1584	0/0:26,0:26:69.21:0,69,825	0/0:30,0:30:87.27:0,87,1044	0/0:33,0:32:93.28:0,93,1112	0/0:15,0:15:45.10:0,45,504
chr10	19098977	.	G	GT	1083.52	PASS	AB=0.932;AC=7;AF=0.125;AN=56;BaseQRankSum=-4.980;DP=419;FS=11.662;HRun=8;HaplotypeScore=54.7371;InbreedingCoeff=0.8139;MQ=96.50;MQ0=3;MQRankSum=-0.214;QD=12.90;ReadPosRankSum=3.403;VQSLOD=1.6664;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:21.01:0,21,192	0/0:3,0:3:9:0,9,79	0/0:53,0:44:37.49:0,37,389	0/1:37,0:25:20.48:20,0,173	0/0:8,0:8:22.26:0,22,195	0/0:9,0:9:24.01:0,24,219	0/0:7,0:7:17.92:0,18,150	0/0:25,0:25:53.99:0,54,484	0/0:11,0:11:27.01:0,27,247	0/0:11,0:11:33.01:0,33,300	0/0:10,0:10:30.02:0,30,274	0/0:7,0:7:21:0,21,188	0/0:10,0:10:30.02:0,30,275	0/0:10,0:10:27.01:0,27,247	0/0:13,0:13:39.02:0,39,357	1/1:1,12:13:33.10:381,33,0	1/1:1,13:14:33.10:381,33,0	1/1:1,15:16:39.12:450,39,0	0/0:16,0:16:42:0,42,376	0/0:19,0:19:54.02:0,54,494	0/0:19,0:19:52.23:0,52,460	0/0:7,0:7:21.01:0,21,192	0/0:11,0:11:30.01:0,30,271	0/0:15,0:15:45.02:0,45,411	0/0:14,0:14:36.01:0,36,329	0/0:15,0:15:42.02:0,42,381	0/0:17,0:17:48:0,48,433	0/0:14,0:14:39.01:0,39,357
chr10	19099343	.	GT	G	947.44	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=10.984;DP=751;FS=0.564;HRun=1;HaplotypeScore=81.9952;InbreedingCoeff=0.9974;MQ=84.52;MQ0=0;MQRankSum=-4.895;QD=18.58;ReadPosRankSum=1.045;VQSLOD=3.8687;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,29:33:87.83:721,88,0	0/0:9,0:9:27.09:0,27,432	0/0:27,0:27:81.26:0,81,1252	0/0:20,0:20:51.17:0,51,805	0/0:26,0:26:75.26:0,75,1199	0/0:30,0:30:90.29:0,90,1413	0/0:22,0:22:66.22:0,66,1037	0/0:27,0:27:81.27:0,81,1272	1/1:4,14:18:43.90:348,44,0	0/0:30,0:30:87.30:0,87,1392	0/0:29,0:29:87.30:0,87,1391	0/0:31,0:31:87.28:0,87,1367	0/0:29,0:29:87.30:0,87,1387	0/0:31,0:31:93.30:0,93,1462	0/0:28,0:28:84.26:0,84,1296	0/0:29,0:29:87.30:0,87,1391	0/0:37,0:37:99:0,111,1745	0/0:32,0:32:96.33:0,96,1534	0/0:17,0:17:51.17:0,51,814	0/0:30,0:30:87.30:0,87,1391	0/0:37,0:37:99:0,111,1749	0/0:27,0:27:81.24:0,81,1248	0/0:20,0:20:60.19:0,60,935	0/0:36,0:36:99:0,108,1699	0/0:23,0:22:69.21:0,69,1077	0/0:34,0:34:99:0,102,1585	0/0:32,0:32:96.29:0,96,1484	0/0:7,0:7:21.07:0,21,323
chr10	19099345	.	ACTG	A	1575.19	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=10.893;DP=749;FS=0.563;HRun=0;HaplotypeScore=110.8485;InbreedingCoeff=0.9989;MQ=84.07;MQ0=0;MQRankSum=-5.552;QD=32.15;ReadPosRankSum=1.300;VQSLOD=3.6588;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,29:32:87.25:1114,87,0	0/0:9,0:9:27.09:0,27,664	0/0:26,0:26:78.27:0,78,1777	0/0:20,0:20:57.07:0,57,1217	0/0:26,0:26:75.26:0,75,1781	0/0:30,0:30:90.31:0,90,2162	0/0:24,0:24:72.25:0,72,1741	0/0:28,0:28:81.27:0,81,1921	1/1:3,14:17:47.87:583,48,0	0/0:29,0:29:87.29:0,87,2097	0/0:30,0:30:90.29:0,90,2125	0/0:29,0:29:84.29:0,84,2070	0/0:28,0:28:84.29:0,84,2070	0/0:31,0:31:93.32:0,93,2264	0/0:27,0:27:81.28:0,81,1957	0/0:29,0:29:87.30:0,87,2144	0/0:36,0:36:99:0,108,2638	0/0:32,0:32:96.30:0,96,2314	0/0:17,0:17:51.18:0,51,1207	0/0:31,0:31:90.29:0,90,2144	0/0:38,0:38:99:0,114,2726	0/0:27,0:27:81.27:0,81,1942	0/0:22,0:22:63.22:0,63,1544	0/0:36,0:36:99:0,108,2645	0/0:23,0:22:69.22:0,69,1646	0/0:33,0:33:99:0,99,2436	0/0:30,0:30:90.31:0,90,2212	0/0:9,0:9:27.09:0,27,612
chr10	19099348	.	G	GA	686.50	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=11.053;DP=761;FS=0.574;HRun=2;HaplotypeScore=83.7791;InbreedingCoeff=0.9979;MQ=83.31;MQ0=0;MQRankSum=-5.896;QD=13.73;ReadPosRankSum=1.409;VQSLOD=2.8923;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:31,2:33:84.62:516,85,0	0/0:10,0:10:24.07:0,24,298	0/0:24,0:24:68.68:0,69,797	0/0:21,0:21:54.11:0,54,613	0/0:24,0:24:72.19:0,72,866	0/0:30,0:30:84.25:0,84,1028	0/0:25,0:25:69.22:0,69,855	0/0:26,0:26:75.24:0,75,930	1/1:14,2:17:43.56:292,44,0	0/0:32,0:32:96.29:0,96,1174	0/0:29,0:29:81.24:0,81,991	0/0:28,0:28:84.25:0,84,1028	0/0:33,0:33:93.27:0,93,1128	0/0:30,0:30:90.27:0,90,1102	0/0:27,0:27:81.25:0,81,1004	0/0:30,0:30:87.27:0,87,1076	0/0:38,0:38:99:0,108,1310	0/0:31,0:31:93.25:0,93,1124	0/0:17,0:17:51.16:0,51,632	0/0:29,0:29:78.24:0,78,967	0/0:39,0:39:99:0,111,1362	0/0:29,0:29:78.23:0,78,955	0/0:22,0:22:63.20:0,63,781	0/0:35,0:35:99:0,102,1264	0/0:26,0:25:78.24:0,78,955	0/0:35,0:35:99:0,99,1217	0/0:33,0:33:96.29:0,96,1176	0/0:8,0:8:24.07:0,24,295
chr10	19101625	.	ATGTG	A	1626.50	PASS	AB=0.949;AC=30;AF=0.625;AN=48;BaseQRankSum=-1.495;DP=484;FS=7.353;HRun=0;HaplotypeScore=104.0724;InbreedingCoeff=0.0890;MQ=64.38;MQ0=20;MQRankSum=-0.106;QD=4.86;ReadPosRankSum=0.272;VQSLOD=1.4304;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/1:7,0:5:0.03:0,0,0	./.	0/0:20,0:17:0:0,0,0	0/0:16,0:14:4.81:0,5,29	1/1:12,1:13:11.97:133,12,0	0/1:27,0:26:20.05:40,0,20	0/0:18,0:16:0:0,0,0	./.	1/1:12,0:10:8.91:71,9,0	0/0:18,0:19:1.82:0,2,5	1/1:23,1:22:20.59:262,21,0	0/1:15,0:14:7.14:47,0,7	0/1:19,0:23:19.48:22,0,19	1/1:10,3:13:14.41:189,14,0	1/1:13,0:11:6.01:56,6,0	0/1:17,0:15:5.71:50,0,6	1/1:16,0:16:10.12:51,10,0	0/1:13,1:14:8.36:123,0,8	0/1:18,1:19:4.86:193,0,5	1/1:29,0:27:0.84:41,1,0	1/1:7,1:8:6.02:85,6,0	0/0:9,0:9:3:0,3,29	1/1:25,4:29:11.99:181,12,0	1/1:12,0:9:8.98:89,9,0	0/1:24,0:20:18.46:34,0,18	1/1:13,0:15:11.67:88,12,0	./.
chr10	19101665	.	GTGTGTGT	G	544.09	PASS	AB=0.977;AC=14;AF=0.250;AN=56;BaseQRankSum=-0.416;DP=473;FS=37.348;HRun=0;HaplotypeScore=149.3427;InbreedingCoeff=-0.0872;MQ=38.73;MQ0=50;MQRankSum=-0.949;QD=2.79;ReadPosRankSum=-0.543;VQSLOD=0.7838;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:16,0:13:0.03:0,0,0	0/0:7,0:5:3.01:0,3,39	0/0:22,0:1:3.01:0,3,40	0/0:18,0:1:3.01:0,3,40	0/0:18,2:17:13.62:0,14,139	0/0:17,0:15:14.26:0,14,285	0/0:27,0:25:49.43:0,49,625	0/0:18,0:12:32.81:0,33,367	0/1:9,0:8:0.35:0,0,1	0/1:18,2:15:99:121,0,351	0/0:19,0:17:15.47:0,15,151	0/0:26,0:25:31.28:0,31,505	0/1:10,1:10:48.63:58,0,49	0/1:18,1:18:34.62:35,0,123	0/0:15,0:15:31.84:0,32,306	1/1:15,0:12:4.16:84,4,0	0/1:17,0:16:11.32:86,0,11	0/1:9,0:11:26.74:42,0,27	0/0:20,0:18:31.89:0,32,384	0/0:21,0:20:9.93:0,10,190	0/0:19,0:16:12.34:0,12,164	0/0:13,0:13:20.63:0,21,189	0/0:14,0:12:25.39:0,25,366	0/1:34,0:32:12.26:12,0,389	0/1:8,0:6:4.89:5,0,96	0/1:19,1:14:99:131,0,267	0/1:7,0:7:24.75:103,0,25	0/1:5,0:4:8.89:9,0,70
chr10	19101669	.	GTGT	G	327.20	PASS	AB=0.995;AC=17;AF=0.304;AN=56;BaseQRankSum=2.095;DP=479;FS=61.674;HRun=0;HaplotypeScore=137.7035;InbreedingCoeff=-0.2458;MQ=37.72;MQ0=54;MQRankSum=0.650;QD=1.24;ReadPosRankSum=-0.111;VQSLOD=0.1796;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:16,0:13:0.02:0,0,0	0/0:4,0:3:3.01:0,3,39	0/0:24,0:1:3.01:0,3,40	0/0:23,0:1:3.01:0,3,40	0/0:18,0:15:13.34:0,13,161	0/0:15,1:14:9.51:0,10,172	0/0:25,1:23:32.86:0,33,516	0/0:18,0:12:35.81:0,36,390	0/1:10,0:8:0.35:0,0,0	0/1:21,0:16:64.21:64,0,386	0/0:20,0:18:15.47:0,15,151	0/1:25,0:24:24.07:24,0,376	0/1:13,0:12:4.45:4,0,104	0/1:20,0:19:20.96:21,0,123	0/0:16,0:16:8.18:0,8,199	1/1:16,0:13:3.78:29,4,0	0/1:18,0:16:14.51:58,0,15	0/1:11,0:10:14.33:14,0,26	0/0:23,0:20:14.02:0,14,325	0/1:19,1:19:41.88:42,0,116	0/1:18,0:15:11.58:12,0,106	0/0:13,0:13:0.38:0,0,175	0/0:14,0:12:24.98:0,25,311	0/1:32,1:31:19.69:20,0,297	0/1:9,0:6:12.14:12,0,67	0/1:19,0:14:99:104,0,266	0/1:10,0:10:56.01:56,0,128	0/1:5,0:4:8.99:9,0,70
chr10	19101672	.	TTG	T	296.08	PASS	AB=1.000;AC=10;AF=0.179;AN=56;BaseQRankSum=3.839;DP=471;FS=1.840;HRun=0;HaplotypeScore=136.9577;InbreedingCoeff=0.6201;MQ=36.87;MQ0=48;MQRankSum=-3.940;QD=3.40;ReadPosRankSum=-1.917;VQSLOD=2.5546;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:15:1.25:3,1,0	0/0:4,0:3:3.01:0,3,31	0/0:25,0:1:3.01:0,3,44	0/0:26,0:2:5.51:0,6,56	0/0:16,0:14:12.04:0,12,184	0/0:17,0:14:18.06:0,18,240	0/0:24,0:22:51.57:0,52,710	0/0:20,0:12:21.02:0,21,260	0/1:11,0:9:0.03:0,0,0	0/0:21,0:16:3.75:0,4,390	0/1:18,0:16:2.62:3,0,156	0/0:23,0:24:51.94:0,52,597	0/0:12,0:11:20.96:0,21,229	0/0:21,0:20:20.92:0,21,330	0/0:15,0:15:39.11:0,39,487	1/1:9,7:13:29.89:219,30,0	1/1:15,2:15:14.54:137,15,0	1/1:6,1:6:6.01:67,6,0	0/0:23,0:20:32.98:0,33,389	0/0:20,0:19:23.44:0,23,249	0/0:18,0:15:11.82:0,12,134	0/0:13,0:13:20.93:0,21,261	0/0:14,0:12:24.08:0,24,353	0/0:31,0:30:27.28:0,27,433	0/0:7,0:6:12.04:0,12,148	0/0:16,0:13:17.20:0,17,300	0/0:9,0:9:18:0,18,201	0/0:5,0:4:6.90:0,7,75
chr10	19101712	.	CAGAGACAG	C	6648.98	PASS	AC=50;AF=0.926;AN=54;BaseQRankSum=1.952;DP=458;FS=2.593;HRun=0;HaplotypeScore=181.2902;InbreedingCoeff=0.4572;MQ=34.91;MQ0=28;MQRankSum=0.181;QD=16.96;ReadPosRankSum=2.721;VQSLOD=4.2056;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:30,1:27:14.58:284,15,0	1/1:1,1:2:3.01:70,3,0	0/0:20,0:4:6.02:0,6,205	0/0:32,0:7:6.02:0,6,161	1/1:7,4:9:6.90:96,7,0	1/1:10,4:11:2.97:20,3,0	1/1:14,4:17:9.48:128,9,0	1/1:14,3:9:15.05:235,15,0	1/1:24,0:21:17.42:246,17,0	1/1:15,6:19:48.14:931,48,0	1/1:10,4:14:5.84:40,6,0	1/1:11,10:20:30.05:600,30,0	1/1:5,12:17:24.08:548,24,0	1/1:17,7:24:20.38:258,20,0	1/1:9,14:23:20.97:312,21,0	1/1:6,14:18:23.97:406,24,0	./.	1/1:2,5:6:6.02:118,6,0	1/1:7,3:8:12.04:230,12,0	1/1:11,3:13:6.76:46,7,0	1/1:8,1:6:6.02:101,6,0	1/1:5,9:14:11.96:161,12,0	1/1:8,4:12:5.98:63,6,0	1/1:23,2:22:8.95:115,9,0	1/1:7,1:8:8.93:65,9,0	1/1:11,7:18:39.11:792,39,0	1/1:7,9:16:30.08:628,30,0	1/1:0,2:2:6.02:155,6,0
chr10	19101718	.	CAG	C	1395.88	PASS	AB=0.937;AC=22;AF=0.393;AN=56;BaseQRankSum=5.955;DP=428;FS=10.882;HRun=0;HaplotypeScore=165.2733;InbreedingCoeff=-0.0214;MQ=34.47;MQ0=26;MQRankSum=-3.224;QD=4.99;ReadPosRankSum=5.154;VQSLOD=1.5726;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,18:27:15.05:188,15,0	1/1:2,0:2:3.01:34,3,0	0/0:17,0:5:12.02:0,12,172	0/0:34,0:7:15.05:0,15,222	0/0:10,1:9:5.38:0,5,32	0/0:8,2:9:6.01:0,6,60	0/1:15,2:16:23.70:24,0,95	0/1:18,0:9:37.16:37,0,76	1/1:3,21:21:17.82:239,18,0	0/1:18,3:19:79.41:268,0,79	0/0:13,0:13:9.03:0,9,116	0/1:20,0:19:74.51:75,0,144	0/1:16,0:16:22.17:161,0,22	0/1:17,3:21:32.81:33,0,117	0/1:21,1:22:12.45:12,0,87	0/1:17,1:17:71.28:71,0,141	0/0:13,0:12:5.89:0,6,37	0/1:6,1:6:7.84:8,0,11	0/1:8,0:6:30.19:30,0,39	0/0:12,0:11:8.21:0,8,105	0/0:6,1:4:5.97:0,6,45	0/0:14,0:14:6.73:0,7,88	0/0:9,0:9:8.61:0,9,91	0/1:20,2:19:6.09:6,0,190	0/0:8,0:8:9.03:0,9,116	0/1:16,1:17:72.46:162,0,72	1/1:12,1:14:12.06:192,12,0	1/1:2,0:2:5.60:26,6,0
chr10	19101720	.	G	GAC	865.53	PASS	AB=0.953;AC=15;AF=0.268;AN=56;BaseQRankSum=0.834;DP=438;FS=5.361;HRun=0;HaplotypeScore=174.4231;InbreedingCoeff=0.0474;MQ=34.22;MQ0=25;MQRankSum=-1.513;QD=4.24;ReadPosRankSum=-1.427;VQSLOD=2.6834;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:31,1:29:14.26:118,14,0	1/1:1,1:2:3.01:53,3,0	0/0:16,0:5:15.03:0,15,184	0/0:35,0:7:15.05:0,15,214	0/0:10,0:8:6.02:0,6,90	0/0:10,0:9:6.01:0,6,70	0/1:16,1:16:37.34:37,0,141	0/1:21,0:12:99:117,0,128	1/1:24,0:21:14.57:57,15,0	0/1:17,3:18:99:237,0,268	0/0:14,0:14:12.03:0,12,160	0/0:21,0:20:17:0,17,366	0/1:18,0:18:99:145,0,104	0/1:20,2:22:5.85:6,0,254	0/0:21,1:22:20.80:0,21,255	0/0:18,0:17:4.74:0,5,223	0/0:14,0:13:5.91:0,6,38	0/0:6,0:5:5.88:0,6,51	0/1:8,0:6:0.87:1,0,91	0/0:12,0:11:9.02:0,9,116	0/0:7,0:4:6.02:0,6,89	0/0:16,0:16:12.04:0,12,178	0/0:8,1:9:9.03:0,9,136	0/0:22,0:19:1.09:0,1,243	0/1:7,1:9:7.93:8,0,124	0/1:16,1:17:99:113,0,236	0/1:14,0:14:63.25:128,0,63	0/0:2,0:2:5.81:0,6,32
chr10	19101731	.	AG	A	645.21	PASS	AB=0.903;AC=24;AF=0.429;AN=56;BaseQRankSum=5.383;DP=443;FS=4.846;HRun=1;HaplotypeScore=172.2079;InbreedingCoeff=-0.3782;MQ=40.05;MQ0=29;MQRankSum=-1.671;QD=2.14;ReadPosRankSum=2.994;VQSLOD=-0.3788;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:24:12:0,12,199	0/0:3,0:3:3.01:0,3,34	0/0:18,0:5:12.04:0,12,191	0/0:37,0:11:16.23:0,16,235	1/1:7,3:9:5.96:35,6,0	0/1:8,1:8:13.94:14,0,42	0/1:17,2:18:5.74:6,0,292	0/1:18,2:15:23.06:23,0,246	0/0:23,0:21:18.93:0,19,282	0/1:17,3:18:71.21:71,0,191	0/1:10,1:11:31.87:32,0,39	0/1:15,4:18:20.47:118,0,20	0/1:16,2:18:33.96:34,0,55	0/1:15,5:20:39.97:40,0,101	0/1:21,2:23:28.42:76,0,28	0/1:16,0:15:24.59:33,0,25	0/0:14,0:13:9.03:0,9,133	1/1:8,0:6:2.44:6,2,0	0/1:11,1:7:23.24:23,0,167	0/1:11,1:11:36.68:37,0,38	0/1:11,1:10:9.57:10,0,40	0/1:15,1:16:43.80:44,0,79	0/1:9,2:11:35.88:36,0,39	1/1:14,1:14:8.48:54,8,0	0/1:8,1:9:49.77:50,0,67	0/1:14,3:17:59.27:59,0,169	0/0:18,0:18:11.52:0,12,277	0/1:4,0:4:5.99:6,0,75
chr10	19101733	.	AC	A	286.80	PASS	AB=0.900;AC=19;AF=0.339;AN=56;BaseQRankSum=5.728;DP=444;FS=2.377;HRun=1;HaplotypeScore=175.7027;InbreedingCoeff=-0.2230;MQ=41.47;MQ0=29;MQRankSum=-2.021;QD=1.20;ReadPosRankSum=3.857;VQSLOD=-0.6457;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:25:13.79:0,14,209	0/0:3,0:3:3.01:0,3,41	0/0:18,1:5:12.04:0,12,192	0/0:37,0:12:7.66:0,8,224	1/1:7,3:9:5.96:35,6,0	0/0:8,1:8:2.95:0,3,48	0/0:18,2:18:17.24:0,17,348	0/1:17,2:15:23.02:23,0,249	0/0:26,0:24:22.07:0,22,362	0/1:16,3:17:38.27:38,0,251	0/0:10,1:11:2:0,2,46	0/1:14,4:17:24.15:89,0,24	0/1:16,2:18:27.31:27,0,94	0/1:15,5:20:23.05:23,0,105	0/1:22,2:24:34.97:40,0,35	0/1:16,0:15:11.92:12,0,37	0/0:14,0:13:9.03:0,9,144	1/1:8,0:6:1.77:4,2,0	0/1:12,1:7:23.17:23,0,168	0/0:9,1:9:2.14:0,2,46	0/1:12,1:11:21.74:22,0,38	0/1:17,1:18:8.93:9,0,86	0/1:9,2:11:21.20:21,0,41	1/1:11,1:11:2.54:13,3,0	0/0:7,1:8:5.95:0,6,85	0/1:13,3:16:53.90:54,0,186	0/0:19,0:19:18.24:0,18,290	0/1:4,0:4:5.10:5,0,80
chr10	19101748	.	GAGAC	G	10771.43	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=1.015;DP=512;FS=20.191;HRun=0;HaplotypeScore=162.6514;InbreedingCoeff=0.9125;MQ=55.11;MQ0=29;MQRankSum=-6.303;QD=33.66;ReadPosRankSum=0.681;VQSLOD=3.4446;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:26:44.92:0,45,1090	1/1:1,2:3:6.02:108,6,0	0/0:37,0:15:13.58:0,14,669	0/0:61,0:31:13.33:0,13,627	1/1:5,4:8:11.87:176,12,0	1/1:5,7:11:30.10:511,30,0	1/1:3,21:22:51.17:900,51,0	1/1:8,13:19:32.41:465,32,0	0/0:25,0:23:42.14:0,42,1017	1/1:6,12:16:35.87:599,36,0	1/1:3,6:9:18.06:323,18,0	1/1:6,11:16:31.35:540,31,0	1/1:2,18:20:47.55:908,48,0	1/1:7,14:21:35.92:640,36,0	1/1:3,25:28:62.35:1083,62,0	0/0:17,0:17:21.06:0,21,330	0/0:12,0:12:12.04:0,12,311	0/0:9,0:6:6.02:0,6,105	1/1:10,6:9:20.42:280,20,0	1/1:3,9:11:24.97:428,25,0	1/1:1,14:14:18.06:321,18,0	1/1:3,16:19:39.13:697,39,0	1/1:2,9:11:26.92:444,27,0	1/1:1,11:12:6.02:105,6,0	1/1:2,7:9:21.07:376,21,0	1/1:5,14:19:42.98:738,43,0	1/1:0,21:21:51.16:915,51,0	1/1:1,3:4:12.04:214,12,0
chr10	19101803	.	GGAGA	G	310.60	PASS	AB=0.949;AC=18;AF=0.360;AN=50;BaseQRankSum=0.464;DP=481;FS=8.237;HRun=0;HaplotypeScore=110.0845;InbreedingCoeff=-0.0296;MQ=42.73;MQ0=41;MQRankSum=0.529;QD=1.38;ReadPosRankSum=3.391;VQSLOD=1.2210;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:17:2.08:0,2,19	0/1:7,0:7:1.62:2,0,27	./.	0/0:32,0:14:0:0,0,0	0/0:10,0:9:3.01:0,3,44	0/1:16,1:15:13.63:34,0,14	0/0:22,1:21:2.87:0,3,69	0/0:30,0:25:0:0,0,0	0/1:24,0:22:16.07:16,0,35	0/1:18,0:17:15.30:18,0,15	0/0:10,0:9:3:0,3,25	0/0:11,0:10:0.62:0,1,9	0/1:11,0:11:47.02:91,0,47	0/1:21,0:20:18.92:19,0,35	1/1:18,1:19:3.01:46,3,0	0/0:14,0:13:2.29:0,2,6	./.	0/0:12,0:9:4.40:0,4,18	0/0:18,0:14:8.99:0,9,84	0/0:10,0:9:1.82:0,2,5	1/1:18,0:15:2.69:45,3,0	1/1:18,0:17:2.72:46,3,0	0/0:13,0:11:2.04:0,2,6	1/1:17,0:14:5.11:27,5,0	./.	0/1:19,0:16:3.84:4,0,45	0/1:21,1:21:65.60:76,0,66	1/1:8,0:6:2.24:12,2,0
chr10	19102062	.	A	AAAGTCTCCC	50503.38	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-8.007;DP=552;FS=9.693;HRun=0;HaplotypeScore=110.7402;InbreedingCoeff=0.9470;MQ=77.72;MQ0=0;MQRankSum=-10.957;QD=100.21;ReadPosRankSum=5.395;VQSLOD=4.9349;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,17:22:54.18:2619,54,0	1/1:2,2:5:12.04:520,12,0	0/0:22,0:22:60.20:0,60,1654	0/0:26,0:26:75.22:0,75,2009	1/1:4,8:14:33.11:1555,33,0	1/1:6,11:21:42.14:2022,42,0	1/1:6,14:31:57.19:2628,57,0	1/1:7,6:25:75.19:2820,75,0	1/1:4,16:22:57.19:2691,57,0	1/1:9,9:18:48.16:2269,48,0	1/1:2,5:9:21.07:891,21,0	1/1:4,16:27:57.15:2613,57,0	1/1:6,14:24:57.19:2721,57,0	1/1:4,16:28:57.19:2722,57,0	1/1:3,18:27:60.21:2719,60,0	1/1:4,9:22:39.13:1865,39,0	1/1:5,18:31:54.18:2621,54,0	1/1:3,4:11:12.04:587,12,0	1/1:6,7:16:45.15:1845,45,0	1/1:8,11:19:51.17:2405,51,0	1/1:5,10:19:33.11:1529,33,0	1/1:3,5:11:18.06:851,18,0	1/1:2,3:8:12.04:576,12,0	1/1:2,9:15:30.10:1436,30,0	1/1:3,10:20:33.11:1583,33,0	1/1:11,8:23:60.19:2345,60,0	1/1:7,16:24:66.23:2934,66,0	1/1:5,3:10:24.08:1136,24,0
chr10	19102237	.	CT	C	19288.28	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-1.288;DP=659;FS=5.967;HRun=4;HaplotypeScore=65.5342;InbreedingCoeff=0.9986;MQ=79.42;MQ0=0;MQRankSum=-9.080;QD=30.86;ReadPosRankSum=5.063;VQSLOD=5.0343;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,29:30:72.22:863,72,0	1/1:0,14:14:39.12:465,39,0	0/0:21,0:21:51:0,51,632	0/0:13,0:12:36.02:0,36,438	1/1:3,36:39:99:1295,108,0	1/1:0,25:25:69.21:827,69,0	1/1:0,17:17:33.10:396,33,0	1/1:2,39:41:99:1327,117,0	1/1:0,17:17:48.15:574,48,0	1/1:0,32:32:96.26:1126,96,0	1/1:1,19:20:54.08:628,54,0	1/1:0,25:25:60.18:719,60,0	1/1:1,18:19:54.13:632,54,0	1/1:1,19:20:51.16:610,51,0	1/1:1,22:23:57.17:683,57,0	1/1:1,17:18:36.11:431,36,0	1/1:0,17:17:48.15:575,48,0	1/1:0,24:24:66.20:791,66,0	1/1:0,17:17:51.11:595,51,0	1/1:3,37:40:99:1277,108,0	1/1:2,10:12:24.07:288,24,0	1/1:1,17:18:48.15:576,48,0	1/1:0,18:18:48.15:576,48,0	1/1:2,21:23:51.16:612,51,0	1/1:1,30:31:72.22:864,72,0	1/1:3,30:33:90.23:1052,90,0	1/1:0,32:32:78.24:934,78,0	1/1:3,17:20:48.14:574,48,0
chr10	19103758	.	TGTCA	T	1183.57	PASS	AB=0.949;AC=7;AF=0.125;AN=56;BaseQRankSum=-0.638;DP=623;FS=12.371;HRun=0;HaplotypeScore=287.8854;InbreedingCoeff=-0.1640;MQ=88.03;MQ0=0;MQRankSum=-3.545;QD=8.58;ReadPosRankSum=-5.421;VQSLOD=0.9038;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:78.25:0,78,2108	0/0:11,0:11:7.02:0,7,140	0/0:31,0:31:93.31:0,93,2396	0/0:31,0:31:89.55:0,90,2121	0/0:37,0:37:40.26:0,40,436	0/0:26,0:26:44.07:0,44,328	0/0:19,0:19:17:0,17,214	0/1:16,20:36:95.84:1062,0,96	0/0:23,0:23:69.22:0,69,1870	0/0:33,0:33:43.78:0,44,485	0/1:13,0:13:37.67:38,0,118	0/0:23,0:23:46.89:0,47,340	0/0:25,0:25:49.63:0,50,371	0/0:24,0:24:38.84:0,39,300	0/0:35,0:35:9.75:0,10,365	0/0:29,0:29:87.28:0,87,2278	0/0:15,0:15:45.15:0,45,1259	0/0:15,0:15:45.13:0,45,1155	0/0:14,0:14:32.49:0,32,229	0/0:23,0:23:41.78:0,42,320	0/1:9,0:9:47.11:47,0,55	0/1:22,0:22:30.20:30,0,177	0/1:20,0:20:91.59:92,0,117	0/0:8,0:8:8.95:0,9,68	0/1:14,0:14:26.01:26,0,197	0/1:24,0:24:18.47:18,0,271	0/0:32,0:32:0.92:0,1,317	0/0:4,0:4:11.44:0,11,74
chr10	19103762	.	A	ATAAAAGGTGAAAGGT	56280.96	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=-10.047;DP=601;FS=22.625;HRun=0;HaplotypeScore=186.1195;InbreedingCoeff=0.9532;MQ=90.06;MQ0=0;MQRankSum=-15.388;QD=129.98;ReadPosRankSum=5.409;VQSLOD=3.4724;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:75.26:0,75,3007	1/1:0,6:10:20.84:1411,21,0	0/0:31,0:31:93.25:0,93,2958	0/0:29,0:29:82.12:0,82,2734	1/1:1,17:29:60.21:4041,60,0	1/1:0,15:31:45.15:3435,45,0	1/1:1,10:21:30.10:2289,30,0	1/1:26,0:26:69.20:3428,69,0	0/0:23,0:23:69.24:0,69,3062	1/1:1,13:26:67.17:3928,67,0	1/1:1,8:18:24.08:1830,24,0	1/1:1,12:23:42.14:3203,42,0	1/1:1,16:28:54.19:3928,54,0	1/1:2,13:26:39.10:2970,39,0	1/1:1,19:30:63.14:4793,63,0	0/0:28,0:28:84.26:0,84,3209	0/0:15,0:15:45.15:0,45,2000	0/0:15,0:15:42.10:0,42,1643	1/1:0,5:18:54.16:2650,54,0	1/1:0,9:23:45.15:2906,45,0	1/1:1,4:11:15.05:1144,15,0	1/1:1,11:14:33.11:2397,33,0	1/1:1,6:15:18.53:1252,19,0	1/1:0,1:8:3.01:229,3,0	1/1:0,11:17:33.11:2518,33,0	1/1:2,11:21:57.20:3530,57,0	1/1:3,14:34:51.15:3710,51,0	1/1:0,3:4:9.03:688,9,0
chr10	19104108	.	AAT	A	4550.99	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=-3.966;DP=454;FS=2.641;HRun=0;HaplotypeScore=65.9815;InbreedingCoeff=0.8107;MQ=64.28;MQ0=4;MQRankSum=3.113;QD=13.63;ReadPosRankSum=1.730;VQSLOD=4.5177;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:20.91:0,21,194	1/1:0,6:6:3.01:45,3,0	0/0:28,0:15:42.02:0,42,419	0/0:16,0:11:30.34:0,30,266	1/1:18,0:18:35.83:289,36,0	1/1:0,18:19:9.02:107,9,0	1/1:1,13:14:5.95:63,6,0	1/1:15,0:15:22.14:326,22,0	0/0:12,0:12:27:0,27,325	1/1:12,0:12:32.83:271,33,0	1/1:0,18:19:20.89:269,21,0	1/1:12,1:15:26.98:245,27,0	1/1:6,0:7:20.96:171,21,0	1/1:1,16:18:9.03:137,9,0	1/1:13,0:13:6.82:170,7,0	0/0:20,0:20:38.96:0,39,398	0/0:22,0:22:45.35:0,45,357	0/0:6,0:6:17.96:0,18,177	1/1:10,1:12:32.88:286,33,0	1/1:21,0:22:47.92:446,48,0	1/1:3,15:16:3.01:46,3,0	1/1:18,0:18:1.36:269,1,0	1/1:11,2:13:9.73:229,10,0	1/1:1,14:15:11.66:181,12,0	1/1:1,21:23:18.05:244,18,0	1/1:2,24:25:56.56:505,57,0	1/1:2,14:16:12.04:182,12,0	1/1:0,13:14:6.01:73,6,0
chr10	19104234	.	T	TTC	506.41	PASS	AB=0.913;AC=17;AF=0.354;AN=48;BaseQRankSum=-2.902;DP=513;FS=6.570;HRun=0;HaplotypeScore=101.4401;InbreedingCoeff=0.0482;MQ=72.11;MQ0=7;MQRankSum=0.537;QD=1.96;ReadPosRankSum=-2.929;VQSLOD=0.5561;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:25:10.24:0,10,46	./.	./.	./.	0/0:23,0:23:8.71:0,9,84	0/0:18,0:20:2.84:0,3,14	0/0:11,0:16:5.68:0,6,28	./.	0/0:10,0:13:15.45:0,15,72	1/1:20,4:25:15.44:148,15,0	0/1:17,0:17:14.94:19,0,15	0/1:16,4:19:7.67:38,0,8	0/0:14,0:14:9.02:0,9,95	0/0:9,0:9:9.02:0,9,91	0/1:15,3:19:21.05:38,0,21	0/0:8,0:16:14.20:0,14,70	0/0:11,0:16:8.52:0,9,42	0/0:1,0:3:2.84:0,3,14	1/1:20,1:23:3.90:46,4,0	0/0:17,0:17:2.99:0,3,25	0/1:25,0:24:0:0,0,0	1/1:21,0:21:3:25,3,0	0/1:13,0:13:25.72:38,0,26	0/1:16,3:19:20.83:119,0,21	0/1:19,0:19:8.12:20,0,8	0/1:23,2:26:16.42:85,0,16	0/1:18,2:23:25.13:39,0,25	1/1:8,0:8:3.01:34,3,0
chr10	19107011	.	CCA	C	392.12	PASS	AB=0.858;AC=8;AF=0.143;AN=56;BaseQRankSum=5.368;DP=361;FS=5.372;HRun=0;HaplotypeScore=48.7001;InbreedingCoeff=0.3155;MQ=70.42;MQ0=3;MQRankSum=-1.041;QD=5.16;ReadPosRankSum=1.266;VQSLOD=1.7816;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,4:9:6.77:136,7,0	0/0:4,0:4:12.03:0,12,168	0/0:29,0:16:21.06:0,21,269	0/0:24,0:21:7.03:0,7,225	0/0:11,0:11:21.07:0,21,334	0/1:8,4:12:47.42:47,0,261	0/0:11,0:11:18.06:0,18,286	0/0:25,0:25:48.16:0,48,757	1/1:1,11:12:27.08:322,27,0	0/0:13,0:13:30.10:0,30,472	0/0:15,0:15:30.10:0,30,472	0/0:14,0:13:36.12:0,36,551	0/0:5,0:5:6.02:0,6,96	0/0:6,0:6:12.04:0,12,191	0/1:15,1:16:2.66:3,0,444	0/0:6,0:6:3:0,3,25	0/0:15,0:15:5.97:0,6,46	0/0:8,0:16:8.93:0,9,66	0/0:18,1:19:9.38:0,9,633	0/0:19,0:19:45.15:0,45,712	0/1:12,1:13:5.67:6,0,396	0/0:5,0:5:6.02:0,6,96	0/0:7,0:7:15.05:0,15,239	0/0:7,0:7:18.06:0,18,286	0/1:10,3:13:8.68:9,0,355	0/0:10,0:10:21.07:0,21,334	0/0:13,0:13:36.12:0,36,564	0/0:11,0:11:30.10:0,30,471
chr10	19107510	.	TA	T	2640.59	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=2.565;DP=577;FS=5.425;HRun=1;HaplotypeScore=180.6078;InbreedingCoeff=0.9850;MQ=82.46;MQ0=0;MQRankSum=-4.073;QD=36.67;ReadPosRankSum=1.620;VQSLOD=3.0165;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,120,1917	0/0:8,0:8:24.08:0,24,380	0/0:24,0:24:72.20:0,72,1060	0/0:22,0:22:60.64:0,61,890	0/0:27,0:27:75.26:0,75,1195	0/0:26,0:26:69.17:0,69,1071	0/0:15,0:15:33.07:0,33,497	0/0:26,0:26:78.26:0,78,1225	0/0:17,0:17:51.16:0,51,792	0/0:28,0:28:81.01:0,81,1242	0/0:18,0:18:54.18:0,54,861	0/0:21,0:20:57.18:0,57,885	0/0:16,0:16:48.15:0,48,743	0/0:25,0:25:69.24:0,69,1100	0/0:28,0:28:75.26:0,75,1197	1/1:0,23:23:63.21:879,63,0	1/1:0,31:31:87.24:1192,87,0	1/1:0,18:18:51.17:712,51,0	0/0:6,0:6:15.05:0,15,240	0/0:20,0:20:42.14:0,42,670	0/0:13,0:13:30.10:0,30,468	0/0:21,0:21:51.16:0,51,789	0/0:21,0:21:48.16:0,48,766	0/0:21,0:21:48.15:0,48,724	0/0:9,0:9:15.05:0,15,239	0/0:19,0:19:51.17:0,51,789	0/0:26,0:26:72.22:0,72,1123	0/0:6,0:6:18.06:0,18,288
chr10	19107555	.	C	CAAGTCAAG	37349.19	PASS	AC=46;AF=0.852;AN=54;BaseQRankSum=-6.763;DP=513;FS=5.207;HRun=0;HaplotypeScore=174.1655;InbreedingCoeff=0.9778;MQ=73.47;MQ0=0;MQRankSum=-12.571;QD=88.93;ReadPosRankSum=2.466;VQSLOD=5.0025;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:90.25:0,90,2223	1/1:2,4:6:15.05:580,15,0	0/0:21,0:21:51.11:0,51,1189	0/0:16,0:14:33.05:0,33,721	1/1:9,16:25:60.12:1717,60,0	1/1:8,8:16:42.10:1431,42,0	1/1:6,16:21:60.21:2342,60,0	1/1:23,8:32:48.16:1796,48,0	0/0:16,0:16:42.14:0,42,1057	1/1:9,16:25:66.23:2657,66,0	1/1:11,2:13:30.06:864,30,0	1/1:6,9:16:48.16:1835,48,0	1/1:5,8:13:39.13:1427,39,0	1/1:5,11:16:36.12:1471,36,0	1/1:7,14:21:60.21:2353,60,0	1/1:7,9:16:48.13:1774,48,0	1/1:15,17:31:69.24:2716,69,0	1/1:7,10:16:42.01:1407,42,0	1/1:11,4:16:39.13:1427,39,0	1/1:5,13:18:54.15:1798,54,0	1/1:5,4:9:12:312,12,0	1/1:9,15:24:63.21:2149,63,0	1/1:4,11:15:39.13:1499,39,0	1/1:6,7:13:12:315,12,0	1/1:4,10:14:27.09:1078,27,0	1/1:6,13:19:51.17:2062,51,0	1/1:5,16:22:60.21:2339,60,0	./.
chr10	19107581	.	CTT	C	372.82	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=2.626;DP=538;FS=0.000;HRun=14;HaplotypeScore=154.7557;InbreedingCoeff=0.9154;MQ=56.42;MQ0=4;MQRankSum=4.068;QD=8.67;ReadPosRankSum=6.238;VQSLOD=0.6482;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,19:29:23.23:346,23,0	0/0:8,0:8:23.16:0,23,179	0/0:14,0:11:11.21:0,11,155	0/0:21,0:14:29.74:0,30,291	0/0:26,0:27:58.68:0,59,517	0/0:22,0:24:47.87:0,48,474	0/0:24,0:23:32.47:0,32,259	0/0:32,0:32:61.47:0,61,561	1/1:6,5:13:11.52:142,12,0	0/0:20,0:21:41.54:0,42,308	0/0:18,0:17:40.82:0,41,325	0/0:19,0:18:41.79:0,42,399	0/0:17,0:16:40.51:0,41,322	0/0:21,0:21:46.40:0,46,350	0/0:20,0:20:43.21:0,43,299	0/0:15,0:17:40.03:0,40,332	0/0:23,0:26:57.68:0,58,514	0/0:17,0:17:33.80:0,34,291	0/0:16,0:15:29.63:0,30,279	0/0:18,0:19:38.71:0,39,313	0/0:8,0:8:17.10:0,17,125	0/0:26,0:26:58.61:0,59,444	0/0:13,0:12:20.60:0,21,133	0/0:11,0:10:8.85:0,9,47	0/0:17,0:17:37.57:0,38,292	0/0:24,0:24:51.33:0,51,418	0/0:24,0:23:41.42:0,41,322	0/0:5,0:5:14.43:0,14,109
chr10	19108098	.	CA	C	14418.07	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=8.199;DP=674;FS=5.276;HRun=8;HaplotypeScore=72.8980;InbreedingCoeff=0.9803;MQ=77.88;MQ0=0;MQRankSum=-4.120;QD=24.82;ReadPosRankSum=2.170;VQSLOD=5.8249;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,129,1558	1/1:0,9:9:27.04:261,27,0	0/0:16,1:17:8.26:0,8,396	0/0:14,0:14:39.11:0,39,459	1/1:0,21:21:63.10:608,63,0	1/1:3,26:29:74.61:723,75,0	1/1:2,21:23:48.07:464,48,0	1/1:1,27:28:75.11:724,75,0	0/0:18,0:18:54.17:0,54,652	1/1:3,33:36:99:954,99,0	1/1:1,15:16:39.06:376,39,0	1/1:3,18:21:48.08:464,48,0	1/1:2,27:29:75.12:724,75,0	1/1:2,17:19:45.07:435,45,0	1/1:2,30:32:90.14:869,90,0	1/1:2,22:24:63.10:608,63,0	1/1:0,25:25:66.11:637,66,0	1/1:2,15:17:36.06:348,36,0	1/1:3,22:25:66.09:632,66,0	1/1:5,25:30:69.09:666,69,0	1/1:0,30:30:75.12:724,75,0	1/1:4,24:28:69.10:666,69,0	1/1:2,12:14:33.05:319,33,0	1/1:2,14:16:39.06:377,39,0	1/1:2,26:28:75.12:724,75,0	1/1:0,31:31:90.14:869,90,0	1/1:3,27:30:81.12:782,81,0	1/1:4,16:20:48.07:464,48,0
chr10	19109249	.	G	GT	16052.90	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-2.342;DP=659;FS=8.051;HRun=8;HaplotypeScore=88.3682;InbreedingCoeff=0.9979;MQ=79.98;MQ0=0;MQRankSum=-3.919;QD=29.40;ReadPosRankSum=2.613;VQSLOD=4.5892;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,99,966	1/1:0,11:11:33.10:381,33,0	0/0:19,0:22:19.19:0,19,243	0/0:22,0:20:38.10:0,38,312	1/1:3,29:33:90.07:1005,90,0	1/1:1,13:14:36.11:415,36,0	1/1:1,14:15:36.11:415,36,0	1/1:3,26:29:78.22:889,78,0	0/0:25,0:25:66.03:0,66,604	1/1:3,23:26:72.16:791,72,0	1/1:1,22:23:63.19:727,63,0	1/1:3,29:32:81.23:927,81,0	1/1:0,26:26:72.21:831,72,0	1/1:4,15:19:39.12:450,39,0	1/1:4,23:27:69.21:796,69,0	1/1:5,28:33:90.25:1020,90,0	1/1:2,13:15:42.08:469,42,0	1/1:3,10:12:30.09:345,30,0	1/1:5,24:29:72.21:831,72,0	1/1:2,27:29:81.17:906,81,0	1/1:2,18:20:48.14:554,48,0	1/1:2,14:16:39.12:450,39,0	1/1:1,16:17:42.12:484,42,0	1/1:2,17:19:39.12:450,39,0	1/1:2,25:27:72.21:831,72,0	1/1:3,25:28:75.20:853,75,0	1/1:1,23:24:60.18:692,60,0	1/1:3,18:21:48.10:539,48,0
chr10	19109280	.	A	AT	1443.55	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=0.704;DP=576;FS=14.951;HRun=8;HaplotypeScore=101.1881;InbreedingCoeff=0.8309;MQ=76.44;MQ0=0;MQRankSum=-5.912;QD=19.25;ReadPosRankSum=1.329;VQSLOD=2.4449;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:86.95:0,87,781	0/0:9,0:9:23.99:0,24,213	0/0:20,0:20:38.71:0,39,335	0/1:16,0:13:6.75:7,0,104	0/0:26,0:26:72.02:0,72,654	0/0:17,0:17:38.99:0,39,352	0/0:14,0:14:36.02:0,36,329	0/0:31,0:31:78.01:0,78,708	0/0:16,0:16:42.02:0,42,384	0/0:20,0:20:48.02:0,48,439	0/0:29,0:29:83.96:0,84,748	0/0:26,0:26:66.02:0,66,601	0/0:25,0:25:56.99:0,57,517	0/0:15,0:15:36:0,36,325	0/0:24,0:24:57.02:0,57,522	1/1:2,28:30:81.24:934,81,0	1/1:2,14:16:39.12:449,39,0	1/1:6,7:13:7.22:194,7,0	0/0:22,0:22:60:0,60,541	0/0:21,0:21:45.01:0,45,412	0/0:11,0:11:27.01:0,27,247	0/0:11,0:11:27.01:0,27,247	0/0:21,0:21:63:0,63,567	0/0:23,0:23:54.01:0,54,488	0/0:27,0:27:69.03:0,69,631	0/0:24,0:24:66.01:0,66,601	0/0:19,0:19:54.01:0,54,489	0/0:18,0:18:54.03:0,54,494
chr10	19109530	.	AT	A	1626.57	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.181;DP=524;FS=0.000;HRun=5;HaplotypeScore=48.0024;InbreedingCoeff=0.9978;MQ=80.96;MQ0=0;MQRankSum=-1.890;QD=30.12;ReadPosRankSum=-0.786;VQSLOD=3.4652;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:54.18:0,54,738	0/0:15,0:15:45.13:0,45,587	0/0:16,0:16:39.09:0,39,502	0/0:11,0:11:30.10:0,30,394	0/0:28,0:28:75.25:0,75,1019	0/0:22,0:21:66.22:0,66,902	0/0:10,0:10:27.09:0,27,369	0/0:22,0:22:66.21:0,66,890	0/0:19,0:19:57.18:0,57,764	0/0:18,0:18:51.17:0,51,698	0/0:11,0:11:33.11:0,33,451	0/0:18,0:18:51.16:0,51,679	0/0:21,0:21:60.20:0,60,821	0/0:19,0:19:54.18:0,54,739	0/0:20,0:20:60.20:0,60,821	1/1:0,21:21:63.18:715,63,0	1/1:1,16:17:45.13:510,45,0	1/1:0,16:16:48.14:544,48,0	0/0:14,0:14:42.14:0,42,575	0/0:26,0:26:78.26:0,78,1067	0/0:18,0:18:54.18:0,54,737	0/0:7,0:7:21.07:0,21,287	0/0:14,0:14:42.14:0,42,575	0/0:11,0:11:33.11:0,33,451	0/0:16,0:16:48.16:0,48,656	0/0:28,0:28:78.25:0,78,1054	0/0:28,0:28:84.28:0,84,1148	0/0:39,0:39:99:0,105,1436
chr10	19109950	.	T	TCAATAA	649.40	PASS	AB=1.000;AC=15;AF=0.357;AN=42;BaseQRankSum=4.279;DP=123;FS=2.260;HRun=0;HaplotypeScore=43.1357;InbreedingCoeff=0.2324;MQ=44.94;MQ0=1;MQRankSum=-2.935;QD=10.65;ReadPosRankSum=2.137;VQSLOD=1.7014;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:8:14.97:0,15,290	0/0:1,0:1:2.97:0,3,20	./.	./.	1/1:1,0:1:2.94:18,3,0	0/0:7,0:7:20.81:0,21,359	./.	0/1:23,0:23:15.66:16,0,1043	./.	0/0:5,0:4:5.74:0,6,143	0/1:3,0:3:7.10:7,0,68	./.	0/0:2,0:2:6.02:0,6,132	0/1:6,0:5:62.70:63,0,73	1/1:2,0:2:3.90:52,4,0	1/1:1,1:2:3.01:111,3,0	1/1:2,8:8:10.29:242,10,0	1/1:1,3:4:9.03:246,9,0	0/0:14,0:14:16.85:0,17,553	0/0:2,0:2:6.02:0,6,112	0/0:2,0:2:6.01:0,6,92	./.	0/0:1,0:1:3.01:0,3,60	./.	0/0:8,0:8:15.04:0,15,266	0/1:3,0:3:25.78:26,0,63	0/1:7,0:7:9.28:9,0,78	0/0:9,0:9:24.05:0,24,401
chr10	19109957	.	C	CAAT	278.44	PASS	AC=8;AF=0.211;AN=38;BaseQRankSum=2.781;DP=142;FS=5.975;HRun=0;HaplotypeScore=36.1740;InbreedingCoeff=0.5924;MQ=48.36;MQ0=2;MQRankSum=-2.781;QD=9.60;ReadPosRankSum=2.933;VQSLOD=1.7103;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,4:10:6.02:122,6,0	0/0:2,0:2:6.02:0,6,86	./.	./.	./.	0/0:7,0:7:21.03:0,21,277	./.	0/0:27,0:27:63.19:0,63,869	./.	0/0:5,0:4:9.03:0,9,129	0/0:3,0:3:6.02:0,6,86	./.	0/0:2,0:2:6.02:0,6,86	0/0:7,0:6:5.97:0,6,62	./.	1/1:1,1:2:3.01:60,3,0	1/1:9,2:8:5.93:78,6,0	1/1:5,1:5:8.99:138,9,0	0/0:16,0:16:36.08:0,36,498	0/0:3,0:3:8.99:0,9,105	0/0:2,0:2:6.02:0,6,86	./.	0/0:1,0:1:3.01:0,3,43	./.	0/0:10,0:10:21.07:0,21,301	0/0:3,0:3:6.02:0,6,80	0/0:8,0:8:6.02:0,6,86	0/0:9,0:9:24.05:0,24,320
chr10	19112086	.	C	CT	3856.92	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-12.982;DP=717;FS=2.501;HRun=0;HaplotypeScore=69.7247;InbreedingCoeff=0.9990;MQ=91.17;MQ0=0;MQRankSum=-1.899;QD=40.60;ReadPosRankSum=3.428;VQSLOD=4.4517;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,114,1544	0/0:10,0:10:30:0,30,355	0/0:33,0:33:89.52:0,90,1126	0/0:27,0:27:77.61:0,78,891	0/0:31,0:31:87.18:0,87,1127	0/0:23,0:23:63.17:0,63,855	0/0:19,0:19:57.18:0,57,776	0/0:28,0:28:72.15:0,72,938	0/0:30,0:30:90.24:0,90,1200	0/0:31,0:31:87.20:0,87,1131	0/0:14,0:14:42.04:0,42,543	0/0:35,0:35:99:0,102,1393	0/0:20,0:20:60.08:0,60,789	0/0:26,0:26:69.18:0,69,906	0/0:27,0:27:78.23:0,78,1036	1/1:0,28:28:78.26:1194,78,0	1/1:0,44:44:99:1745,114,0	1/1:0,23:23:60.20:918,60,0	0/0:15,0:15:36.08:0,36,476	0/0:15,0:15:39.09:0,39,517	0/0:44,0:44:99:0,123,1657	0/0:21,0:21:59.01:0,59,797	0/0:21,0:21:60.08:0,60,769	0/0:38,0:38:99:0,114,1520	0/0:20,0:20:57.16:0,57,768	0/0:20,0:20:60.09:0,60,786	0/0:26,0:26:62.81:0,63,963	0/0:8,0:7:24.08:0,24,322
chr10	19113433	.	CT	C	376.21	PASS	AB=0.944;AC=16;AF=0.286;AN=56;BaseQRankSum=1.238;DP=246;FS=0.000;HRun=2;HaplotypeScore=52.0405;InbreedingCoeff=0.4302;MQ=81.97;MQ0=3;MQRankSum=-2.464;QD=5.15;ReadPosRankSum=1.582;VQSLOD=0.6109;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:14,4:18:39.42:267,39,0	1/1:3,1:4:2.99:23,3,0	0/1:16,1:11:11.57:12,0,179	0/0:22,0:16:35.68:0,36,325	1/1:2,1:3:2.99:23,3,0	0/0:6,0:6:3.90:0,4,23	0/0:15,0:15:21.66:0,22,125	0/0:11,0:11:4.07:0,4,22	1/1:7,0:7:14.61:107,15,0	1/1:6,2:8:4.53:42,5,0	0/0:6,0:6:5.90:0,6,42	0/0:9,0:9:9.68:0,10,54	0/0:5,0:5:9.38:0,9,63	0/0:9,0:9:15.77:0,16,104	0/0:7,0:7:8.85:0,9,59	0/0:11,3:14:0.88:0,1,146	0/0:16,0:16:23.80:0,24,181	0/1:4,1:5:8.46:8,0,68	0/1:3,0:3:0.01:0,0,0	0/1:4,0:4:0:0,0,0	0/0:19,0:19:7.69:0,8,46	0/0:2,0:2:2.96:0,3,20	0/0:6,0:6:5.18:0,5,26	0/0:8,0:8:13.54:0,14,77	0/0:8,0:8:5.90:0,6,39	0/0:4,0:4:2.88:0,3,20	1/1:2,2:4:5.96:46,6,0	0/0:6,0:6:0.95:0,1,39
chr10	19113434	.	TTCC	T	583.88	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=-3.367;DP=241;FS=1.705;HRun=0;HaplotypeScore=56.7796;InbreedingCoeff=0.5995;MQ=79.45;MQ0=3;MQRankSum=-2.989;QD=20.13;ReadPosRankSum=0.694;VQSLOD=2.9823;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,8:18:36.12:490,36,0	0/0:4,0:4:5.89:0,6,37	0/0:15,0:9:23.92:0,24,275	0/0:21,0:16:38.52:0,39,505	0/0:3,0:3:2.74:0,3,12	0/0:4,0:5:11.98:0,12,135	0/0:10,0:14:37.58:0,38,425	0/0:9,0:10:14.88:0,15,131	1/1:0,6:7:14.50:210,15,0	0/0:9,0:9:16.95:0,17,99	0/0:6,0:6:11.91:0,12,133	0/0:8,0:9:18.01:0,18,200	0/0:5,0:5:12.50:0,13,158	0/0:8,0:9:24.06:0,24,311	0/0:7,0:7:11.98:0,12,142	0/0:14,0:14:35.73:0,36,466	0/0:16,0:16:35.99:0,36,473	0/0:5,0:5:14.89:0,15,185	0/0:3,0:3:2.89:0,3,19	0/1:4,0:4:0:0,0,0	0/0:17,0:18:20.96:0,21,220	0/0:2,0:2:3:0,3,32	0/0:4,0:6:6.02:0,6,71	0/0:6,0:8:14.78:0,15,185	0/0:7,0:8:17.88:0,18,162	0/0:4,0:4:5.88:0,6,62	0/0:4,0:4:11.87:0,12,84	0/0:5,0:6:12.56:0,13,153
chr10	19115552	.	GGTT	G	2375.94	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.574;DP=728;FS=0.544;HRun=0;HaplotypeScore=152.2119;InbreedingCoeff=0.9992;MQ=90.23;MQ0=0;MQRankSum=-4.356;QD=37.71;ReadPosRankSum=1.232;VQSLOD=4.1349;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,105,2483	0/0:10,0:10:27.09:0,27,607	0/0:31,0:31:81.22:0,81,1776	0/0:28,0:28:81.27:0,81,1751	0/0:28,0:28:75.26:0,75,1736	0/0:30,0:30:84.29:0,84,1951	0/0:30,0:30:90.31:0,90,2086	0/0:28,0:28:78.27:0,78,1829	0/0:27,0:27:81.28:0,81,1869	0/0:27,0:27:81.28:0,81,1867	0/0:18,0:18:48.15:0,48,1072	0/0:36,0:36:99:0,102,2258	0/0:29,0:29:87.30:0,87,2025	0/0:27,0:27:78.24:0,78,1718	0/0:40,0:40:99:0,117,2746	1/1:0,23:23:54.19:952,54,0	1/1:2,26:28:63.21:1091,63,0	1/1:1,11:12:27.09:476,27,0	0/0:20,0:20:60.21:0,60,1347	0/0:20,0:20:54.19:0,54,1221	0/0:30,0:30:87.30:0,87,2058	0/0:20,0:20:60.21:0,60,1393	0/0:13,0:13:39.12:0,39,841	0/0:41,0:41:99:0,123,2888	0/0:16,0:16:48.16:0,48,1117	0/0:35,0:35:99:0,102,2370	0/0:30,0:30:90.31:0,90,2127	0/0:15,0:15:45.10:0,45,861
chr10	19116439	.	GA	G	8974.61	PASS	AB=0.780;AC=52;AF=0.929;AN=56;BaseQRankSum=-5.627;DP=527;FS=0.929;HRun=10;HaplotypeScore=95.5892;InbreedingCoeff=0.4107;MQ=56.74;MQ0=8;MQRankSum=-4.590;QD=18.09;ReadPosRankSum=4.121;VQSLOD=5.1272;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,15:26:41.95:361,42,0	1/1:2,3:5:12:104,12,0	0/0:31,0:10:14.16:0,14,103	0/1:27,2:13:31.06:31,0,127	1/1:5,10:15:29.98:259,30,0	1/1:4,9:13:26.99:234,27,0	1/1:5,6:11:20.98:182,21,0	1/1:11,20:29:53.96:467,54,0	1/1:1,8:9:26.98:230,27,0	1/1:5,16:20:47.99:416,48,0	1/1:4,26:29:82.99:700,83,0	1/1:7,15:22:44.99:390,45,0	1/1:5,14:19:47.66:401,48,0	1/1:9,7:16:30.45:258,30,0	1/1:4,13:17:38.99:338,39,0	1/1:5,14:18:44.99:390,45,0	1/1:11,14:25:17.85:378,18,0	1/1:5,12:17:38.93:330,39,0	1/1:5,18:23:7.70:432,8,0	1/1:7,19:26:53.96:466,54,0	0/1:2,3:5:24.18:42,0,24	1/1:1,11:12:32.99:286,33,0	1/1:1,11:12:32.99:286,33,0	1/1:7,6:13:20.99:182,21,0	1/1:3,25:28:80.97:696,81,0	1/1:5,12:17:38.99:337,39,0	1/1:7,22:29:74.97:650,75,0	1/1:1,4:5:14.99:129,15,0
chr10	19116453	.	TAA	T	5753.91	PASS	AB=1.000;AC=31;AF=0.554;AN=56;BaseQRankSum=-7.122;DP=559;FS=0.000;HRun=11;HaplotypeScore=130.5017;InbreedingCoeff=0.9448;MQ=58.87;MQ0=4;MQRankSum=-9.340;QD=18.50;ReadPosRankSum=-0.355;VQSLOD=3.2218;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:26:34.22:153,34,0	0/0:1,0:5:9.86:0,10,34	0/1:31,0:13:1.66:2,0,52	0/0:29,0:15:26.60:0,27,252	0/0:2,0:15:26.75:0,27,97	1/1:1,11:12:30.07:319,30,0	1/1:2,9:11:18.04:191,18,0	1/1:6,26:32:78.17:819,78,0	1/1:2,0:11:20.57:92,21,0	0/0:8,0:24:44.50:0,44,155	0/0:5,0:30:64.40:0,64,230	1/1:6,15:21:42.09:447,42,0	0/0:1,0:19:34.33:0,34,122	1/1:3,9:12:30.06:319,30,0	1/1:2,18:20:39.09:415,39,0	0/0:4,0:20:37.61:0,38,131	0/0:5,0:25:53.14:0,53,229	0/0:3,0:19:38.43:0,38,179	1/1:9,16:25:47.84:510,48,0	1/1:6,12:19:42.08:439,42,0	1/1:1,9:10:21.05:223,21,0	1/1:3,12:15:14.74:357,15,0	1/1:4,16:20:39.08:415,39,0	1/1:2,11:13:23.96:255,24,0	1/1:3,30:33:75.16:798,75,0	0/0:0,0:18:44.30:0,44,156	0/0:3,0:27:60.36:0,60,206	0/0:0,0:15:27.95:0,28,101
chr10	19117424	.	T	TTTG	3646.37	PASS	AB=0.913;AC=42;AF=0.750;AN=56;BaseQRankSum=-6.256;DP=409;FS=0.557;HRun=0;HaplotypeScore=65.3870;InbreedingCoeff=0.4817;MQ=61.66;MQ0=5;MQRankSum=5.473;QD=11.65;ReadPosRankSum=1.720;VQSLOD=3.2346;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:11,0:11:17.16:17,0,58	1/1:8,0:8:14.97:121,15,0	0/0:26,0:17:18:0,18,170	0/0:12,0:6:6.01:0,6,62	1/1:28,0:28:17.28:331,17,0	1/1:0,10:10:6.02:122,6,0	1/1:2,4:6:3.01:61,3,0	1/1:37,0:36:33.90:405,34,0	0/1:9,0:9:52.64:53,0,79	1/1:24,0:24:23.91:238,24,0	1/1:19,0:19:3.49:151,3,0	1/1:6,4:11:6.23:73,6,0	0/1:9,0:9:1.48:27,0,1	1/1:6,10:16:12.04:244,12,0	1/1:7,0:7:11.97:96,12,0	0/0:12,0:12:26.93:0,27,228	0/0:23,0:23:15.31:0,15,209	0/0:23,0:22:44.80:0,45,365	1/1:6,7:13:21:263,21,0	1/1:1,4:5:11.80:113,12,0	0/1:7,8:15:6.70:114,0,7	1/1:9,0:9:15:168,15,0	1/1:10,0:10:14.96:120,15,0	1/1:4,2:6:6.02:122,6,0	1/1:2,10:12:3.01:61,3,0	1/1:19,0:19:16.36:187,16,0	1/1:11,0:11:5.07:142,5,0	1/1:18,0:18:53.80:418,54,0
chr10	19117439	.	GTTATTA	G	2469.40	PASS	AC=18;AF=0.375;AN=48;BaseQRankSum=0.765;DP=363;FS=2.506;HRun=0;HaplotypeScore=79.5440;InbreedingCoeff=0.7542;MQ=56.39;MQ0=5;MQRankSum=-2.107;QD=15.73;ReadPosRankSum=2.136;VQSLOD=2.8236;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:17.92:0,18,318	./.	./.	./.	1/1:15,11:27:29.03:400,29,0	0/0:14,0:14:18.06:0,18,415	0/0:6,0:6:3.01:0,3,86	0/0:35,0:34:38.99:0,39,666	0/0:5,0:8:6.02:0,6,157	1/1:12,9:21:24.08:422,24,0	1/1:8,10:18:30.03:411,30,0	0/0:9,0:9:6.49:0,6,129	1/1:3,3:6:9.03:186,9,0	0/0:15,0:15:15.05:0,15,389	0/0:6,0:6:6.02:0,6,101	1/1:7,4:11:6.02:124,6,0	1/1:10,11:21:21.07:409,21,0	1/1:10,15:24:15.05:304,15,0	0/0:11,0:11:18.04:0,18,365	0/0:5,0:5:9.03:0,9,163	0/0:12,0:12:9.50:0,10,255	0/0:5,0:5:6.02:0,6,132	0/0:9,0:9:6.02:0,6,99	0/0:3,0:3:6.02:0,6,171	0/0:9,0:9:3.01:0,3,86	1/1:10,6:16:18.06:337,18,0	1/1:8,4:12:3.01:54,3,0	./.
chr10	19118187	.	G	GAC	38776.37	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-9.051;DP=780;FS=1.413;HRun=0;HaplotypeScore=80.4938;InbreedingCoeff=0.9993;MQ=80.69;MQ0=0;MQRankSum=-9.690;QD=52.61;ReadPosRankSum=5.066;VQSLOD=5.2553;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,55:56:99:2898,151,0	1/1:1,12:13:36.12:694,36,0	0/0:18,0:18:39.15:0,39,656	0/0:24,0:24:44.10:0,44,626	1/1:0,21:22:57.20:1101,57,0	1/1:0,15:15:42.14:811,42,0	1/1:0,17:17:48.16:927,48,0	1/1:2,36:39:99:2149,117,0	1/1:3,28:31:78.27:1504,78,0	1/1:9,27:36:90.30:1666,90,0	1/1:0,18:18:48.16:927,48,0	1/1:4,41:45:99:2260,117,0	1/1:2,28:30:81.28:1563,81,0	1/1:0,38:38:99:1912,99,0	1/1:0,31:31:87.30:1681,87,0	1/1:2,26:29:75.26:1449,75,0	1/1:2,42:43:99:2318,120,0	1/1:0,21:21:63.22:1217,63,0	1/1:1,17:18:54.19:1032,54,0	1/1:1,17:18:51.17:984,51,0	1/1:0,45:45:99:2492,129,0	1/1:0,29:29:84.29:1623,84,0	1/1:1,24:25:72.24:1368,72,0	1/1:1,26:27:75.26:1449,75,0	1/1:2,14:16:45.15:849,45,0	1/1:1,34:36:99:1954,102,0	1/1:4,25:29:75.26:1428,75,0	1/1:0,8:9:27.09:520,27,0
chr10	19118333	.	AG	A	20680.31	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=3.797;DP=732;FS=0.604;HRun=1;HaplotypeScore=102.6637;InbreedingCoeff=0.9995;MQ=87.45;MQ0=0;MQRankSum=-5.178;QD=40.00;ReadPosRankSum=1.358;VQSLOD=4.9270;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,163,2534	1/1:0,12:12:30.10:419,30,0	0/0:20,0:20:60.20:0,60,950	0/0:30,0:30:90.19:0,90,1381	1/1:0,18:18:54.18:755,54,0	1/1:0,18:18:51.17:713,51,0	1/1:0,24:24:69.23:965,69,0	1/1:0,41:41:99:1700,123,0	0/0:30,0:30:90.28:0,90,1389	1/1:0,34:34:99:1427,102,0	1/1:0,23:23:66.22:923,66,0	1/1:0,24:24:69.23:965,69,0	1/1:0,41:41:99:1594,114,0	1/1:0,39:39:99:1552,111,0	1/1:0,27:27:75.25:1048,75,0	0/0:32,0:32:96.31:0,96,1509	0/0:32,0:32:96.33:0,96,1535	0/0:17,0:17:48.16:0,48,767	1/1:0,15:15:45.15:629,45,0	1/1:0,17:17:48.16:671,48,0	1/1:0,39:39:99:1594,114,0	1/1:0,21:21:63.21:881,63,0	1/1:0,18:18:51.17:713,51,0	1/1:0,30:30:84.28:1175,84,0	1/1:0,23:23:60.20:839,60,0	1/1:0,22:22:66.19:898,66,0	1/1:0,23:23:63.21:881,63,0	1/1:0,8:8:24.08:336,24,0
chr10	19119883	.	T	TC	1394.39	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-9.673;DP=560;FS=12.299;HRun=8;HaplotypeScore=57.1591;InbreedingCoeff=0.9955;MQ=75.28;MQ0=0;MQRankSum=-0.974;QD=24.46;ReadPosRankSum=3.661;VQSLOD=3.5952;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:66.01:0,66,604	0/0:8,0:8:21.01:0,21,192	0/0:15,0:15:26.98:0,27,243	0/0:12,0:12:25.09:0,25,206	0/0:17,0:17:45.02:0,45,412	0/0:26,0:26:60.01:0,60,549	0/0:25,0:25:63.01:0,63,571	0/0:30,0:30:50.98:0,51,463	0/0:19,0:19:47.99:0,48,434	0/0:20,0:19:51.02:0,51,463	0/0:10,0:10:27.01:0,27,246	0/0:29,0:29:75.02:0,75,678	0/0:24,0:24:66.01:0,66,596	0/0:23,0:23:63.01:0,63,572	0/0:25,0:25:72.03:0,72,654	1/1:3,15:19:41.96:465,42,0	1/1:0,13:13:39.12:450,39,0	1/1:2,23:25:54.16:623,54,0	0/0:10,0:10:30.02:0,30,274	0/0:18,0:18:45.02:0,45,411	0/0:47,0:47:99:0,111,1003	0/0:15,0:15:42.02:0,42,384	0/0:20,0:20:57.03:0,57,520	0/0:25,0:25:68.99:0,69,623	0/0:15,0:15:45.02:0,45,412	0/0:14,0:14:42.02:0,42,383	0/0:17,0:17:42.01:0,42,384	0/0:8,0:8:21.01:0,21,192
chr10	19120562	.	AC	A	3620.20	PASS	AB=0.760;AC=52;AF=0.929;AN=56;BaseQRankSum=-0.169;DP=464;FS=1.267;HRun=12;HaplotypeScore=60.5736;InbreedingCoeff=-0.0882;MQ=86.76;MQ0=0;MQRankSum=-2.591;QD=7.80;ReadPosRankSum=2.809;VQSLOD=2.3010;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,8:19:13.96:99,14,0	1/1:3,3:6:8.96:70,9,0	0/1:21,1:18:27.77:28,0,56	0/1:22,2:21:14.23:14,0,30	1/1:4,5:9:11.47:74,11,0	1/1:6,10:16:14.93:116,15,0	1/1:5,16:22:37.87:284,38,0	1/1:21,9:30:11.85:93,12,0	1/1:2,12:14:29.88:232,30,0	1/1:6,8:15:19.83:134,20,0	1/1:4,6:10:8.90:65,9,0	0/1:5,12:17:5.87:98,0,6	1/1:3,13:16:29.88:232,30,0	1/1:2,13:17:30.95:221,31,0	1/1:3,8:14:30.82:211,31,0	1/1:1,0:17:28.52:82,29,0	1/1:5,0:33:50.91:147,51,0	1/1:2,0:12:22.59:66,23,0	1/1:12,4:17:9.75:120,10,0	0/1:7,13:20:4.33:129,0,4	1/1:5,10:16:10.98:75,11,0	1/1:6,4:14:25.84:147,26,0	1/1:8,5:13:1.09:97,1,0	1/1:8,12:20:2.42:202,2,0	1/1:4,13:17:29.75:224,30,0	1/1:2,10:12:20.39:131,20,0	1/1:7,11:18:26.83:206,27,0	1/1:0,3:3:2.99:23,3,0
chr10	19121043	.	A	AGTGT	7562.61	PASS	AB=0.783;AC=45;AF=0.900;AN=50;BaseQRankSum=-0.721;DP=830;FS=8.151;HRun=0;HaplotypeScore=174.2581;InbreedingCoeff=-0.1525;MQ=61.95;MQ0=18;MQRankSum=-0.879;QD=10.16;ReadPosRankSum=-1.154;VQSLOD=3.3672;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:26:11.84:225,12,0	1/1:9,1:10:9.02:149,9,0	./.	./.	1/1:21,3:28:6.02:141,6,0	1/1:14,3:18:5.96:141,6,0	1/1:16,1:25:8.50:95,8,0	0/1:30,0:29:9.19:34,0,9	1/1:30,2:28:2.95:341,3,0	1/1:36,0:35:36.12:625,36,0	./.	0/1:23,8:35:17.15:452,0,17	1/1:19,1:22:8.96:137,9,0	0/1:27,13:43:19.88:619,0,20	0/1:21,12:40:3.06:337,0,3	1/1:20,1:24:21.54:393,22,0	1/1:26,0:26:36.10:683,36,0	1/1:13,8:21:6.02:109,6,0	1/1:28,0:28:18.46:236,18,0	1/1:17,3:23:5.61:83,6,0	0/1:42,10:57:44.15:246,0,44	1/1:24,6:33:20.86:435,21,0	1/1:16,8:26:2.55:70,3,0	1/1:24,14:40:29.61:681,30,0	1/1:26,8:39:20.19:303,20,0	1/1:27,0:27:18:243,18,0	1/1:20,1:26:36.06:627,36,0	1/1:13,0:17:9.03:157,9,0
chr10	19121116	.	TTGTGTATGTGTG	T	1149.27	PASS	AB=0.710;AC=5;AF=0.089;AN=56;BaseQRankSum=6.855;DP=913;FS=0.000;HRun=0;HaplotypeScore=319.7251;InbreedingCoeff=0.6567;MQ=51.91;MQ0=37;MQRankSum=-6.901;QD=18.24;ReadPosRankSum=-2.105;VQSLOD=1.2254;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:57.67:0,58,2395	0/0:13,0:13:30.10:0,30,1346	0/0:76,0:11:2.84:0,3,52	0/0:68,0:19:22.65:0,23,460	0/0:21,0:21:33.11:0,33,1536	0/0:24,0:24:56.96:0,57,2752	0/0:36,0:36:3.48:0,3,2601	0/0:49,0:41:36.12:0,36,1257	0/0:28,0:27:66.23:0,66,3383	0/0:45,0:40:66.70:0,67,2920	0/0:18,0:18:45.15:0,45,1917	0/0:36,0:35:53.85:0,54,2620	0/0:23,0:23:47.92:0,48,2063	0/0:39,0:39:84.08:0,84,4092	0/0:44,0:44:99:0,111,5466	1/1:7,19:24:32.91:579,33,0	0/1:13,9:21:38.27:256,0,38	1/1:11,3:15:11.56:440,12,0	0/0:44,0:38:33.11:0,33,1473	0/0:18,0:17:38.67:0,39,1768	0/0:47,0:46:80.23:0,80,3513	0/0:28,0:27:65.62:0,66,3272	0/0:16,0:16:38.48:0,38,1664	0/0:52,0:52:99:0,103,4739	0/0:23,0:23:45.15:0,45,2093	0/0:31,0:28:57.20:0,57,2800	0/0:24,0:24:35.95:0,36,1974	0/0:15,0:15:24.08:0,24,1060
chr10	19124163	.	A	AATTC	2296.93	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=3.381;DP=697;FS=2.017;HRun=0;HaplotypeScore=129.7292;InbreedingCoeff=0.9379;MQ=72.28;MQ0=2;MQRankSum=-9.050;QD=33.78;ReadPosRankSum=-3.486;VQSLOD=3.2161;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:14,13:27:35.64:641,36,0	0/0:9,0:9:18.06:0,18,286	0/0:19,0:17:8.98:0,9,138	0/0:18,0:14:8.85:0,9,88	0/0:26,0:26:54.17:0,54,805	0/0:25,0:25:57.19:0,57,918	0/0:23,0:23:48.12:0,48,747	0/0:29,0:29:54.06:0,54,704	1/1:25,15:41:90.30:1777,90,0	0/0:19,0:19:39.11:0,39,570	0/0:14,0:14:42.14:0,42,665	0/0:35,0:35:87.24:0,87,1358	0/0:25,0:25:51.17:0,51,818	0/0:23,0:23:60.17:0,60,924	0/0:28,0:28:66.21:0,66,1030	0/0:31,0:31:75.21:0,75,1151	0/0:26,0:26:60.20:0,60,970	0/0:21,0:21:45.06:0,45,664	0/0:22,0:21:41.78:0,42,606	0/0:21,0:21:45.13:0,45,700	0/0:21,0:21:45.13:0,45,688	0/0:26,0:26:54.10:0,54,798	0/0:27,0:27:63.21:0,63,1004	0/0:27,0:27:72.21:0,72,1108	0/0:22,0:22:51.15:0,51,795	0/0:37,0:36:74.71:0,75,1111	0/0:25,0:24:60.13:0,60,905	0/0:30,0:30:78.09:0,78,1185
chr10	19129182	.	TC	T	2652.56	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=2.809;DP=727;FS=4.859;HRun=2;HaplotypeScore=89.2582;InbreedingCoeff=0.9997;MQ=88.87;MQ0=0;MQRankSum=-2.928;QD=34.90;ReadPosRankSum=1.545;VQSLOD=4.0073;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:96.30:0,96,1416	0/0:13,0:13:39.13:0,39,583	0/0:32,0:32:91.03:0,91,1299	0/0:20,0:20:60.16:0,60,834	0/0:35,0:35:99:0,102,1486	0/0:21,0:21:63.19:0,63,905	0/0:36,0:36:99:0,105,1554	0/0:41,0:41:99:0,117,1730	0/0:28,0:28:84.27:0,84,1235	0/0:18,0:18:54.18:0,54,809	0/0:21,0:21:63.20:0,63,919	0/0:26,0:26:78.26:0,78,1168	0/0:34,0:34:99:0,102,1499	0/0:23,0:23:69.23:0,69,1016	0/0:23,0:23:69.23:0,69,1033	1/1:1,27:28:36.31:968,36,0	1/1:0,18:18:50.75:662,51,0	1/1:0,30:30:90.29:1166,90,0	0/0:23,0:23:66.21:0,66,964	0/0:28,0:28:84.28:0,84,1247	0/0:26,0:26:78.26:0,78,1168	0/0:26,0:26:78.26:0,78,1157	0/0:28,0:28:81.27:0,81,1211	0/0:19,0:19:57.11:0,57,767	0/0:26,0:26:78.25:0,78,1149	0/0:37,0:37:99:0,108,1583	0/0:24,0:23:69.23:0,69,1031	0/0:10,0:10:30.10:0,30,449
chr10	19129637	.	TG	T	13956.81	PASS	AB=0.909;AC=27;AF=0.482;AN=56;BaseQRankSum=14.405;DP=749;FS=2.203;HRun=1;HaplotypeScore=74.3893;InbreedingCoeff=0.9307;MQ=88.66;MQ0=0;MQRankSum=-2.126;QD=38.03;ReadPosRankSum=2.075;VQSLOD=5.5643;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:93.27:0,93,1435	0/1:9,1:10:11.86:12,0,399	0/0:30,0:30:87.22:0,87,1302	0/0:23,0:23:66.18:0,66,959	0/0:35,0:35:99:0,105,1664	1/1:0,28:28:81.27:1133,81,0	1/1:0,25:25:66.22:923,66,0	1/1:0,33:33:99:1367,99,0	0/0:22,0:22:60.20:0,60,949	0/0:33,0:32:99:0,99,1528	0/0:26,0:26:78.22:0,78,1175	1/1:0,26:26:75.25:1049,75,0	0/0:32,0:32:96.31:0,96,1511	1/1:0,16:16:45.15:629,45,0	1/1:0,28:28:72.24:1007,72,0	0/0:27,0:27:81.26:0,81,1271	0/0:34,0:34:99:0,102,1557	0/0:29,0:29:87.30:0,87,1369	1/1:0,29:29:87.29:1217,87,0	1/1:0,41:41:99:1612,120,0	1/1:0,25:25:69.23:965,69,0	1/1:0,27:27:81.23:1111,81,0	1/1:1,30:31:78.26:1086,78,0	1/1:0,24:24:60.20:839,60,0	1/1:0,24:24:72.24:1007,72,0	0/0:32,0:32:93.32:0,93,1487	0/0:23,0:23:69.24:0,69,1101	0/0:5,0:5:15.05:0,15,240
chr10	19130521	.	CGCATGCGCGCGCGCGCGCGGGCGT	C	20660.96	PASS	AB=1.000;AC=28;AF=0.500;AN=56;BaseQRankSum=4.047;DP=685;FS=5.574;HRun=0;HaplotypeScore=498.1013;InbreedingCoeff=0.8960;MQ=71.37;MQ0=3;MQRankSum=-11.594;QD=62.42;ReadPosRankSum=2.646;VQSLOD=2.1555;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:87.22:0,87,4489	0/0:15,0:14:36.10:0,36,1987	0/1:19,0:16:3.43:3,0,273	0/1:32,0:24:3.11:3,0,551	0/0:29,0:28:69.24:0,69,4894	1/1:12,13:25:48.15:2435,48,0	1/1:14,9:23:29.32:1270,29,0	1/1:8,1:9:27.08:473,27,0	0/0:25,0:25:72.18:0,72,4533	0/0:34,0:33:93.28:0,93,4440	0/0:10,0:10:21.04:0,21,1252	1/1:12,22:34:63.14:3276,63,0	0/0:31,0:31:76.09:0,76,5059	1/1:6,18:24:51.12:2866,51,0	1/1:12,22:34:60.15:3331,60,0	0/0:24,0:24:63.17:0,63,3952	0/0:37,0:37:99:0,102,6361	0/0:38,0:38:93.27:0,93,6777	1/1:10,3:13:35.98:881,36,0	1/1:5,6:11:18.06:998,18,0	1/1:27,3:30:23.77:360,24,0	1/1:7,11:18:24.55:1360,25,0	1/1:5,10:15:15.04:703,15,0	1/1:16,5:21:14.98:315,15,0	1/1:8,14:22:42.14:2386,42,0	0/0:34,0:34:99:0,102,5751	0/0:29,0:29:75.12:0,75,3316	0/0:16,0:16:45.04:0,45,2689
chr10	19130523	.	CAT	C	990.28	PASS	AB=0.972;AC=23;AF=0.411;AN=56;BaseQRankSum=13.002;DP=671;FS=3.265;HRun=0;HaplotypeScore=309.7260;InbreedingCoeff=0.6096;MQ=71.02;MQ0=3;MQRankSum=-11.859;QD=3.38;ReadPosRankSum=6.043;VQSLOD=1.5845;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:90.29:0,90,1665	0/0:15,0:14:30.77:0,31,259	0/0:19,0:16:11.44:0,11,290	0/1:32,0:23:19.56:20,0,334	0/0:29,0:28:60.86:0,61,336	1/1:23,0:23:7.26:99,7,0	0/1:22,0:22:1.57:32,0,2	0/1:9,0:9:5.93:6,0,18	0/0:25,0:25:72.25:0,72,1393	0/0:32,0:31:78.41:0,78,844	0/0:11,0:11:19.84:0,20,158	1/1:34,0:34:22.30:153,22,0	0/0:31,0:31:58.36:0,58,446	1/1:23,0:23:27.01:166,27,0	1/1:31,0:31:35.49:209,35,0	0/1:21,4:25:63.08:63,0,981	0/0:36,0:36:99:0,100,1728	0/0:38,1:39:65.91:0,66,1406	0/1:12,0:12:20.81:50,0,21	1/1:11,0:11:9.32:59,9,0	0/0:27,0:27:5.99:0,6,16	1/1:17,0:17:8.29:55,8,0	1/1:14,0:14:9.65:56,10,0	1/1:20,0:20:7.52:58,8,0	1/1:20,0:20:25.03:168,25,0	0/0:34,0:34:96.25:0,96,912	0/0:29,0:29:66.57:0,67,693	0/0:16,0:16:35.45:0,35,218
chr10	19130525	.	TGC	T	5432.50	PASS	AB=1.000;AC=42;AF=0.750;AN=56;BaseQRankSum=3.932;DP=652;FS=2.544;HRun=0;HaplotypeScore=293.3356;InbreedingCoeff=0.8112;MQ=69.34;MQ0=3;MQRankSum=-4.285;QD=11.76;ReadPosRankSum=4.517;VQSLOD=4.3054;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:68.87:0,69,657	1/1:4,10:13:24.07:293,24,0	0/1:17,0:13:0.74:1,0,15	0/0:32,0:23:14.77:0,15,92	1/1:4,26:29:60.19:738,60,0	1/1:22,0:22:22.85:118,23,0	1/1:21,0:21:9.52:57,10,0	1/1:9,0:9:2.98:21,3,0	0/0:25,0:25:57.05:0,57,607	1/1:10,20:29:60.18:725,60,0	1/1:2,9:11:14.90:185,15,0	1/1:33,0:33:32.79:163,33,0	1/1:5,25:30:57.18:702,57,0	1/1:23,0:23:32.98:170,33,0	1/1:31,0:31:41.06:213,41,0	0/0:26,0:26:43.47:0,43,379	0/0:36,0:36:89.85:0,90,844	0/0:39,0:39:81.01:0,81,785	1/1:11,0:11:8.52:42,9,0	1/1:11,0:11:13.86:64,14,0	0/1:25,0:25:0.21:0,0,0	1/1:17,0:17:11.36:56,11,0	1/1:13,0:13:6.60:30,7,0	1/1:17,0:17:2.84:14,3,0	1/1:20,0:20:29.53:180,30,0	1/1:10,24:34:69.22:849,69,0	1/1:13,15:28:36.11:442,36,0	1/1:2,13:15:30.09:369,30,0
chr10	19130540	.	G	GT	806.59	PASS	AB=0.776;AC=4;AF=0.074;AN=54;BaseQRankSum=-6.011;DP=508;FS=0.000;HRun=0;HaplotypeScore=261.1783;InbreedingCoeff=-0.0024;MQ=66.04;MQ0=3;MQRankSum=3.488;QD=7.20;ReadPosRankSum=3.631;VQSLOD=3.2889;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:30.95:0,31,292	0/0:12,0:11:22.31:0,22,96	0/0:22,0:12:7.56:0,8,59	0/1:21,0:10:3.20:3,0,70	0/0:30,0:29:60.20:0,60,262	0/0:13,0:13:23.72:0,24,90	0/0:9,0:9:16.02:0,16,74	0/0:1,0:1:1.82:0,2,5	0/0:24,0:24:63.20:0,63,336	0/0:29,0:27:63.85:0,64,284	0/0:10,0:10:16.31:0,16,72	0/0:22,0:22:22.29:0,22,141	0/0:37,0:37:83.73:0,84,410	0/0:18,0:18:32.88:0,33,122	0/0:22,0:22:40.48:0,40,153	0/1:16,8:24:54.83:205,0,55	0/1:17,14:31:99:264,0,117	0/1:18,18:36:24.37:435,0,24	0/0:3,0:3:6.66:0,7,21	0/0:6,0:6:11.76:0,12,43	./.	0/0:12,0:12:17.65:0,18,79	0/0:10,0:10:10.79:0,11,52	0/0:5,0:5:2.22:0,2,7	0/0:14,0:14:27.86:0,28,104	0/0:30,0:30:71.23:0,71,287	0/0:16,0:16:35.65:0,36,155	0/0:16,0:16:33.22:0,33,157
chr10	19130541	.	G	GCGT	2191.38	PASS	AB=0.872;AC=9;AF=0.161;AN=56;BaseQRankSum=-9.102;DP=516;FS=0.000;HRun=0;HaplotypeScore=274.0698;InbreedingCoeff=-0.0843;MQ=63.99;MQ0=4;MQRankSum=5.704;QD=10.54;ReadPosRankSum=-0.043;VQSLOD=2.6796;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:54.28:0,54,548	0/1:12,0:11:11.85:13,0,12	0/0:22,0:11:6.84:0,7,54	0/0:20,0:8:8.39:0,8,65	0/0:31,0:30:26.08:0,26,85	0/0:13,0:13:27.63:0,28,174	0/0:10,0:10:11.89:0,12,56	0/0:1,0:1:2.84:0,3,14	0/0:23,0:23:65.07:0,65,511	0/1:29,0:27:25.69:26,0,84	0/0:10,0:10:7.41:0,7,25	0/0:22,0:22:43.88:0,44,260	0/1:39,0:39:61.13:61,0,148	0/0:19,0:19:40.16:0,40,281	0/0:22,0:22:48.47:0,48,301	0/1:16,8:24:52.76:495,0,53	0/1:17,14:31:99:700,0,128	0/1:18,18:36:50.66:1003,0,51	0/0:4,0:4:8.49:0,8,62	0/0:6,0:6:14.12:0,14,90	1/1:7,0:7:2.03:4,2,0	0/0:12,0:12:19.37:0,19,111	0/0:10,0:10:8.60:0,9,38	0/0:6,0:6:1.74:0,2,19	0/0:14,0:14:33.49:0,33,193	0/1:30,0:30:19.72:20,0,29	0/0:17,0:17:17.35:0,17,51	0/0:16,0:16:2.36:0,2,52
chr10	19130555	.	CAT	C	44.08	PASS	AB=0.866;AC=2;AF=0.036;AN=56;BaseQRankSum=-0.653;DP=719;FS=16.797;HRun=0;HaplotypeScore=330.2669;InbreedingCoeff=-0.0531;MQ=58.68;MQ0=3;MQRankSum=1.268;QD=0.69;ReadPosRankSum=-2.089;VQSLOD=0.9192;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:25:66.20:0,66,1243	0/0:13,0:13:33.11:0,33,650	0/0:28,0:15:23.07:0,23,413	0/0:21,0:7:2.45:0,2,36	0/0:30,0:30:78.23:0,78,1501	0/0:24,0:24:34.48:0,34,234	0/0:33,0:33:38.66:0,39,395	0/0:19,0:19:50.87:0,51,597	0/0:27,0:27:75.21:0,75,1316	0/0:32,0:31:90:0,90,1636	0/0:13,0:13:30.10:0,30,598	0/0:46,0:45:59.70:0,60,459	0/0:46,0:46:99:0,126,2460	0/0:36,0:36:38.66:0,39,338	0/0:34,0:34:48.58:0,49,305	0/0:21,2:23:0.10:0,0,641	0/1:31,1:32:99:117,0,888	0/1:22,10:32:9.67:10,0,647	0/0:17,0:17:50.78:0,51,581	0/0:19,0:19:31.65:0,32,279	0/0:25,0:25:16.39:0,16,171	0/0:19,0:19:22.34:0,22,127	0/0:16,0:16:15.61:0,16,122	0/0:23,0:23:24.44:0,24,268	0/0:20,0:20:29.94:0,30,223	0/0:32,0:32:87.30:0,87,1716	0/0:17,0:17:45.15:0,45,885	0/0:14,0:14:42.04:0,42,779
chr10	19130561	.	CGT	C	6112.54	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=1.819;DP=739;FS=5.574;HRun=0;HaplotypeScore=308.0723;InbreedingCoeff=0.9677;MQ=57.46;MQ0=3;MQRankSum=-7.877;QD=17.03;ReadPosRankSum=-3.581;VQSLOD=3.5357;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:30:63.04:0,63,625	0/0:12,1:13:24.07:0,24,288	0/0:23,0:12:27.73:0,28,338	0/0:20,0:7:2.56:0,3,33	0/0:28,1:29:66.19:0,66,790	1/1:2,23:25:36.11:446,36,0	1/1:5,30:36:43.21:499,43,0	1/1:3,20:23:57.14:679,57,0	0/0:2,0:25:57.02:0,57,525	0/0:32,0:31:84.15:0,84,952	0/0:16,0:16:30.09:0,30,354	1/1:1,43:45:71.03:859,71,0	0/0:46,2:48:80.18:0,80,1353	1/1:3,37:40:55:671,55,0	1/1:6,32:38:52.41:634,52,0	0/0:24,0:24:51.17:0,51,828	0/0:27,2:29:32.50:0,33,1016	0/0:27,0:27:60.20:0,60,984	1/1:2,16:18:48.13:579,48,0	1/1:0,20:20:33.05:391,33,0	1/1:4,24:29:18.02:218,18,0	1/1:3,17:20:23.91:297,24,0	1/1:4,14:19:12.04:149,12,0	1/1:3,21:24:23.48:296,23,0	1/1:2,19:21:33.89:395,34,0	0/0:30,1:31:41.46:0,41,762	0/0:18,0:18:39.10:0,39,462	0/0:14,0:14:27.09:0,27,335
chr10	19131391	.	TTCTCTC	T	1167.01	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=-0.193;DP=406;FS=0.000;HRun=0;HaplotypeScore=96.7071;InbreedingCoeff=0.7420;MQ=86.93;MQ0=7;MQRankSum=-1.917;QD=10.24;ReadPosRankSum=-0.654;VQSLOD=2.1356;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:33:45.58:0,46,960	0/0:6,0:6:12.01:0,12,254	0/0:40,0:27:26.27:0,26,563	0/0:37,0:21:23.16:0,23,233	0/0:9,0:10:26.98:0,27,537	1/1:1,5:6:6.02:114,6,0	0/0:7,0:7:2.88:0,3,15	0/1:16,0:16:5.42:196,0,5	0/0:16,0:16:35.15:0,35,725	0/0:13,0:13:27.06:0,27,603	0/0:6,0:6:6.02:0,6,145	1/1:2,10:12:12.04:227,12,0	0/0:18,0:19:33.10:0,33,917	1/1:4,9:13:9.03:174,9,0	1/1:4,8:12:6.02:114,6,0	0/0:10,0:12:20.95:0,21,467	0/0:4,0:13:20.84:0,21,288	0/0:6,0:6:12.04:0,12,261	1/1:7,0:7:11.95:100,12,0	1/1:13,0:13:14.74:194,15,0	0/0:7,6:13:0:0,0,0	1/1:6,0:6:5.96:43,6,0	1/1:1,4:5:6.02:106,6,0	1/1:3,10:13:2.97:20,3,0	1/1:11,0:11:5.98:67,6,0	0/0:8,0:8:18.05:0,18,509	0/0:20,0:21:51.14:0,51,1318	0/0:30,0:28:48.12:0,48,1292
chr10	19131405	.	CTCTCTCCCT	C	1505.25	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=-1.930;DP=362;FS=0.678;HRun=0;HaplotypeScore=95.1322;InbreedingCoeff=0.7564;MQ=73.31;MQ0=11;MQRankSum=-2.413;QD=16.72;ReadPosRankSum=-1.306;VQSLOD=1.5926;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:34:48.09:0,48,1153	0/0:6,0:6:15.02:0,15,292	0/0:46,0:21:44.10:0,44,762	0/0:40,0:17:16.75:0,17,325	0/0:10,0:9:26.98:0,27,589	1/1:5,0:5:6.02:134,6,0	0/0:4,2:5:2.88:0,3,15	0/1:16,0:15:2.42:295,0,2	0/0:16,0:16:33.57:0,34,806	0/0:12,0:12:32.11:0,32,780	0/0:2,0:2:6.02:0,6,119	1/1:12,0:12:13.22:286,13,0	0/0:12,0:12:35.89:0,36,1103	1/1:11,0:10:8.95:211,9,0	1/1:10,0:10:6.02:114,6,0	0/0:10,0:10:24.97:0,25,605	0/0:14,0:14:29.09:0,29,472	0/0:5,0:5:12.04:0,12,323	1/1:0,4:4:12.02:140,12,0	1/1:0,6:8:14.74:217,15,0	0/0:9,0:9:0:0,0,0	1/1:2,0:2:6:65,6,0	1/1:4,0:4:6.02:136,6,0	1/1:10,0:10:2.97:20,3,0	1/1:1,7:8:5.98:77,6,0	0/0:6,0:6:18.05:0,18,644	0/0:20,0:20:57.15:0,57,1677	0/0:21,0:19:51.12:0,51,1490
chr10	19131415	.	C	CT	605.33	PASS	AB=0.841;AC=7;AF=0.146;AN=48;BaseQRankSum=2.097;DP=315;FS=6.239;HRun=1;HaplotypeScore=66.4530;InbreedingCoeff=0.1128;MQ=64.68;MQ0=10;MQRankSum=-1.860;QD=9.46;ReadPosRankSum=2.057;VQSLOD=1.3765;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:22,9:31:36.67:432,0,37	0/0:5,0:5:8.91:0,9,100	0/0:42,0:17:38.72:0,39,374	0/0:36,0:12:17.02:0,17,123	0/0:6,0:5:15.04:0,15,176	0/0:6,0:6:5.83:0,6,37	1/1:6,0:5:1.25:3,1,0	0/0:9,1:8:2.86:0,3,15	0/1:11,5:16:88.05:256,0,88	0/0:8,0:8:18.06:0,18,236	0/0:1,0:1:3:0,3,25	0/0:10,0:11:14.54:0,15,88	0/0:11,0:11:27.62:0,28,298	0/0:10,0:9:11.79:0,12,74	0/0:10,0:10:5.90:0,6,37	0/0:9,0:9:3.46:0,3,144	0/0:13,0:13:10.47:0,10,144	0/1:5,0:5:8.12:8,0,42	./.	0/0:8,0:8:8.82:0,9,54	./.	./.	1/1:5,0:5:1.83:5,2,0	./.	0/0:8,1:9:2.90:0,3,16	0/0:5,0:5:15.05:0,15,210	0/0:16,0:16:47.74:0,48,611	0/0:13,0:12:32.84:0,33,377
chr10	19131420	.	C	CT	68.75	PASS	AB=0.902;AC=4;AF=0.083;AN=48;BaseQRankSum=4.834;DP=302;FS=8.847;HRun=0;HaplotypeScore=63.6980;InbreedingCoeff=0.2220;MQ=68.06;MQ0=9;MQRankSum=-2.751;QD=1.09;ReadPosRankSum=2.098;VQSLOD=0.5794;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:25,5:29:21.03:106,0,21	0/0:5,0:5:1.75:0,2,31	0/0:39,0:14:13.95:0,14,228	0/0:33,0:12:8.55:0,9,80	0/0:7,0:6:14.76:0,15,97	0/0:7,0:7:2.12:0,2,6	0/1:9,0:8:0:0,0,0	./.	0/1:10,5:15:45.81:46,0,81	0/0:10,0:10:21.69:0,22,150	./.	0/0:8,0:8:2.30:0,2,5	0/0:11,0:11:25.32:0,25,187	0/0:10,0:9:4.78:0,5,23	0/0:9,0:9:0.94:0,1,2	0/0:7,0:7:5.44:0,5,82	0/0:15,0:15:19.60:0,20,144	0/0:4,0:4:6.76:0,7,40	./.	0/0:7,0:7:1.82:0,2,5	0/1:9,0:9:0:0,0,0	./.	0/0:5,0:5:0.47:0,0,2	0/0:8,0:8:3:0,3,25	0/0:7,0:7:0:0,0,0	0/0:5,0:5:15:0,15,132	0/0:15,0:15:43.92:0,44,323	0/0:12,0:11:28.36:0,28,215
chr10	19131421	.	C	CCT	236.40	PASS	AB=0.934;AC=6;AF=0.130;AN=46;BaseQRankSum=5.145;DP=297;FS=0.894;HRun=0;HaplotypeScore=64.9161;InbreedingCoeff=0.3528;MQ=71.11;MQ0=9;MQRankSum=-5.083;QD=3.33;ReadPosRankSum=1.107;VQSLOD=1.9038;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:24,5:28:21.02:207,21,0	0/0:5,0:5:7.41:0,7,50	0/0:39,0:15:29.95:0,30,300	0/0:34,0:12:17.88:0,18,120	0/0:7,0:6:17.93:0,18,141	0/0:7,0:7:1.37:0,1,3	./.	./.	0/1:9,5:14:24.94:121,0,25	0/0:10,0:10:19.51:0,20,150	./.	0/0:8,0:8:2.30:0,2,5	0/0:11,0:11:30.33:0,30,239	0/0:10,0:9:4.37:0,4,22	0/0:8,0:8:0.94:0,1,2	0/0:6,0:6:16.37:0,16,121	0/0:15,0:15:20.26:0,20,185	0/0:4,0:4:5.97:0,6,46	./.	0/0:6,0:6:1.55:0,2,5	0/1:9,0:9:0:0,0,0	./.	0/0:5,0:5:0.15:0,0,1	0/0:8,0:8:2.99:0,3,24	0/1:7,0:7:0:0,0,0	0/0:4,0:4:8.99:0,9,77	0/0:15,0:15:44.61:0,45,344	0/1:12,0:11:11.31:11,0,173
chr10	19131428	.	CA	C	1057.97	PASS	AB=0.945;AC=36;AF=0.667;AN=54;BaseQRankSum=0.526;DP=274;FS=10.132;HRun=1;HaplotypeScore=50.7725;InbreedingCoeff=-0.0564;MQ=81.96;MQ0=6;MQRankSum=-2.542;QD=4.68;ReadPosRankSum=-0.292;VQSLOD=-0.6664;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:35,0:34:37.16:37,0,119	1/1:4,1:5:2.90:16,3,0	0/0:36,1:18:27.39:0,27,249	0/1:28,0:12:25.36:25,0,87	0/1:9,0:8:1.52:32,0,2	1/1:7,0:7:8.99:76,9,0	./.	0/1:8,1:7:0:0,0,0	0/1:13,0:13:8.63:9,0,21	0/1:7,5:12:58.91:59,0,66	0/0:3,0:3:5.96:0,6,49	1/1:4,0:4:5.84:41,6,0	0/1:14,0:14:41.65:113,0,42	1/1:3,0:3:5.95:44,6,0	1/1:4,1:5:8.99:76,9,0	0/1:5,1:6:11.79:50,0,12	0/1:13,2:15:63.73:82,0,64	0/1:6,0:6:14.51:20,0,15	1/1:2,0:2:3:25,3,0	1/1:5,0:5:3:26,3,0	1/1:7,0:7:5.97:46,6,0	1/1:3,0:3:3:26,3,0	0/0:1,0:1:0:0,0,0	1/1:3,0:3:8.97:72,9,0	0/1:5,0:5:0:0,0,0	0/1:3,0:3:15.89:16,0,45	1/1:14,0:14:7.26:152,7,0	1/1:13,0:12:23.90:160,24,0
chr10	19132886	.	CAGG	C	1180.32	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-1.836;DP=525;FS=9.291;HRun=0;HaplotypeScore=121.8731;InbreedingCoeff=0.9751;MQ=75.32;MQ0=0;MQRankSum=0.087;QD=35.77;ReadPosRankSum=1.993;VQSLOD=4.2300;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,22:24:60.20:964,60,0	0/0:5,0:5:12.04:0,12,253	0/0:16,0:16:33.17:0,33,643	0/0:14,0:14:18.80:0,19,460	0/0:18,0:18:54.19:0,54,1188	0/0:18,0:18:51.17:0,51,739	0/0:16,0:16:48.16:0,48,684	0/0:16,0:16:45.14:0,45,617	1/1:0,9:9:21.07:337,21,0	0/0:19,0:19:54.19:0,54,1190	0/0:17,0:17:48.15:0,48,1017	0/0:27,0:27:75.23:0,75,1039	0/0:21,0:21:54.19:0,54,1167	0/0:29,0:29:81.26:0,81,1146	0/0:19,0:19:54.18:0,54,776	0/0:19,0:19:48.16:0,48,1045	0/0:29,0:29:87.30:0,87,1917	0/0:18,0:18:48.16:0,48,1059	0/0:24,0:24:48.11:0,48,667	0/0:8,0:8:21.07:0,21,326	0/0:58,0:58:99:0,156,2205	0/0:13,0:13:39.13:0,39,577	0/0:8,0:8:24.08:0,24,356	0/0:21,0:21:60.19:0,60,836	0/0:17,0:17:48.16:0,48,690	0/0:12,0:12:36.12:0,36,795	0/0:21,0:21:63.22:0,63,1389	0/0:9,0:9:27.09:0,27,596
chr10	19134004	.	C	CACTA	23137.17	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-17.114;DP=780;FS=4.520;HRun=0;HaplotypeScore=119.6907;InbreedingCoeff=0.9978;MQ=83.03;MQ0=0;MQRankSum=-6.762;QD=60.57;ReadPosRankSum=2.695;VQSLOD=6.6800;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,141,2677	0/0:14,0:14:39.13:0,39,755	0/0:24,0:24:69.18:0,69,1280	0/0:29,0:28:75.26:0,75,1391	0/0:32,0:32:96.32:0,96,1817	1/1:0,21:23:60.21:1598,60,0	1/1:5,23:31:57.20:1528,57,0	1/1:8,19:31:84.26:2074,84,0	0/0:22,0:22:63.22:0,63,1221	0/0:17,0:17:51.17:0,51,973	0/0:18,0:18:54.19:0,54,1041	1/1:7,25:32:69.24:1879,69,0	0/0:29,0:29:84.27:0,84,1585	1/1:1,27:28:75.26:2053,75,0	1/1:3,24:27:66.23:1798,66,0	0/0:24,0:24:72.22:0,72,1354	0/0:44,0:44:99:0,126,2352	0/0:33,0:33:96.33:0,96,1825	1/1:5,21:26:78.23:2034,78,0	1/1:2,22:27:66.05:1558,66,0	1/1:5,47:52:96.79:2469,97,0	1/1:3,18:22:42.61:1100,43,0	1/1:0,23:23:44.99:1231,45,0	1/1:3,34:37:90.27:2380,90,0	1/1:3,20:23:54.18:1434,54,0	0/0:31,0:31:93.32:0,93,1773	0/0:28,0:27:84.29:0,84,1608	0/0:5,0:5:15.05:0,15,291
chr10	19134947	.	ACCGGTGTTCAT	A	3116.07	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.951;DP=484;FS=7.424;HRun=0;HaplotypeScore=176.3724;InbreedingCoeff=0.9947;MQ=89.11;MQ0=0;MQRankSum=-8.501;QD=82.00;ReadPosRankSum=-0.631;VQSLOD=3.0753;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,26:26:52.90:2009,53,0	0/0:9,0:9:27.09:0,27,1599	0/0:20,0:20:57.54:0,58,2366	0/0:20,0:20:47.45:0,47,1874	0/0:16,0:16:48.16:0,48,2311	0/0:10,0:10:30.10:0,30,1778	0/0:22,0:22:66.21:0,66,3445	0/0:19,0:19:57.20:0,57,3353	1/1:0,12:12:33.11:1229,33,0	0/0:23,0:23:69.23:0,69,3757	0/0:12,0:12:36.12:0,36,2043	0/0:20,0:20:60.21:0,60,3474	0/0:18,0:18:54.19:0,54,3057	0/0:33,0:33:99:0,99,4990	0/0:19,0:19:57.20:0,57,3075	0/0:19,0:19:57.20:0,57,3093	0/0:15,0:15:45.15:0,45,2509	0/0:11,0:10:33.11:0,33,1798	0/0:16,0:16:48.16:0,48,2341	0/0:14,0:14:42.14:0,42,2248	0/0:29,0:29:87.26:0,87,4489	0/0:15,0:15:45.15:0,45,2417	0/0:14,0:14:42.13:0,42,2239	0/0:19,0:19:57.20:0,57,3239	0/0:18,0:18:54.19:0,54,2973	0/0:14,0:14:42.14:0,42,2349	0/0:15,0:15:45.15:0,45,2557	0/0:6,0:6:18.06:0,18,1067
chr10	19136528	.	T	TC	2379.68	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-9.500;DP=716;FS=0.465;HRun=4;HaplotypeScore=76.3975;InbreedingCoeff=0.9992;MQ=88.42;MQ0=0;MQRankSum=-0.849;QD=29.75;ReadPosRankSum=2.083;VQSLOD=3.9695;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,122,1320	0/0:26,0:26:66.19:0,66,745	0/0:26,0:26:65.06:0,65,719	0/0:37,0:37:57.55:0,58,738	0/0:21,0:21:63.17:0,63,702	0/0:21,0:21:57.11:0,57,609	0/0:20,0:20:60.09:0,60,643	0/0:35,0:35:95.99:0,96,992	0/0:17,0:17:44.78:0,45,470	0/0:24,0:24:65.12:0,65,685	0/0:12,0:12:36.10:0,36,400	0/0:36,0:36:99:0,102,1136	0/0:26,0:26:72.15:0,72,792	0/0:23,0:23:69.17:0,69,758	0/0:38,0:38:99:0,105,1165	1/1:1,24:25:57.19:764,57,0	1/1:2,29:31:72.23:955,72,0	1/1:1,23:24:60.20:804,60,0	0/0:20,0:20:54.02:0,54,541	0/0:20,0:20:48.14:0,48,554	0/0:22,0:22:54.04:0,54,592	0/0:28,0:28:57.21:0,57,787	0/0:24,0:24:44:0,44,586	0/0:26,0:26:78.21:0,78,873	0/0:22,0:22:55.92:0,56,612	0/0:36,0:36:99:0,100,1089	0/0:22,0:22:54.15:0,54,606	0/0:10,0:10:24.04:0,24,257
chr10	19141009	.	AG	A	13287.26	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=-0.763;DP=698;FS=1.637;HRun=4;HaplotypeScore=90.2198;InbreedingCoeff=0.9999;MQ=89.01;MQ0=0;MQRankSum=-5.764;QD=31.86;ReadPosRankSum=3.742;VQSLOD=5.2621;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,114,1577	0/0:11,0:11:33.11:0,33,459	0/0:35,0:35:95.79:0,96,1272	0/0:26,0:25:69.06:0,69,873	0/0:27,0:27:75.23:0,75,1032	1/1:1,18:19:54.17:648,54,0	1/1:0,14:14:42.13:504,42,0	1/1:2,25:27:75.19:883,75,0	0/0:22,0:22:60.18:0,60,809	0/0:12,0:12:36.11:0,36,487	0/0:18,0:18:48.16:0,48,668	1/1:2,28:30:84.26:1008,84,0	0/0:28,0:28:81.27:0,81,1127	1/1:2,36:38:99:1223,102,0	1/1:1,33:34:87.27:1044,87,0	1/1:0,31:31:87.26:1044,87,0	1/1:1,21:22:63.19:756,63,0	1/1:1,22:23:54.12:648,54,0	1/1:1,19:20:57.17:684,57,0	1/1:2,20:22:57.17:684,57,0	1/1:4,52:56:99:1717,144,0	1/1:2,13:15:39.12:468,39,0	1/1:2,16:17:42.13:503,42,0	1/1:1,33:34:81.25:972,81,0	1/1:1,13:14:42.13:503,42,0	0/0:20,0:20:51.15:0,51,679	0/0:30,0:30:90.30:0,90,1259	0/0:10,0:10:30.10:0,30,420
chr10	19141190	.	A	AC	14484.38	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=5.650;DP=623;FS=1.787;HRun=3;HaplotypeScore=77.8695;InbreedingCoeff=0.9988;MQ=84.90;MQ0=0;MQRankSum=-2.608;QD=37.23;ReadPosRankSum=1.139;VQSLOD=5.2376;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:57.17:0,57,684	0/0:11,0:11:33.10:0,33,396	0/0:22,0:22:65.78:0,66,756	0/0:18,0:18:51.13:0,51,578	0/0:21,0:21:63.15:0,63,729	1/1:0,22:22:60.20:839,60,0	1/1:2,23:25:60.20:840,60,0	1/1:3,19:22:57.19:798,57,0	0/0:15,0:15:39.12:0,39,468	0/0:21,0:21:60.18:0,60,717	0/0:18,0:18:54.16:0,54,645	1/1:0,21:21:63.21:882,63,0	0/0:22,0:22:63.19:0,63,755	1/1:1,27:28:75.25:1050,75,0	1/1:1,24:25:69.23:966,69,0	1/1:1,19:20:57.19:798,57,0	1/1:1,29:29:78.26:1092,78,0	1/1:0,18:18:48.16:664,48,0	1/1:3,20:23:60.18:804,60,0	1/1:5,26:31:81.27:1119,81,0	1/1:1,32:33:93.31:1302,93,0	1/1:0,25:25:75.25:1037,75,0	1/1:1,16:17:45.14:612,45,0	1/1:3,22:25:60.20:840,60,0	1/1:2,22:23:60.15:839,60,0	0/0:25,0:25:66.20:0,66,791	0/0:35,0:35:99:0,102,1209	0/0:6,0:6:18.06:0,18,216
chr10	19141687	.	A	AGGGTGAAAGTGTGGGACCAC	68508.11	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=7.379;DP=860;FS=5.762;HRun=0;HaplotypeScore=435.4519;InbreedingCoeff=0.9993;MQ=75.43;MQ0=4;MQRankSum=-19.382;QD=129.50;ReadPosRankSum=-1.317;VQSLOD=4.0073;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:84.27:0,84,3885	0/0:11,0:11:27.08:0,27,1165	0/0:25,0:25:26.82:0,27,1180	0/0:28,0:28:39.12:0,39,1382	0/0:25,0:25:63.22:0,63,3201	1/1:22,6:31:63.22:4785,63,0	1/1:39,0:38:72.21:4189,72,0	1/1:37,0:37:80.76:4660,81,0	0/0:37,0:37:84.29:0,84,3863	0/0:25,0:25:51.18:0,51,2399	0/0:21,0:21:45.15:0,45,1867	1/1:26,7:34:75.26:5585,75,0	0/0:47,0:47:99:0,108,5256	1/1:50,8:59:99:10381,135,0	1/1:30,3:36:75.26:5337,75,0	1/1:29,7:36:78.25:5167,78,0	1/1:29,3:36:48.16:3957,48,0	1/1:16,5:22:45.15:3838,45,0	1/1:20,0:19:33.11:2226,33,0	1/1:14,4:18:33.11:2163,33,0	1/1:32,1:35:39.13:1923,39,0	1/1:23,2:25:52.42:2846,52,0	1/1:19,3:21:33.11:1970,33,0	1/1:35,3:39:51.17:3529,51,0	1/1:25,9:36:75.26:5950,75,0	0/0:31,0:31:72.22:0,72,3219	0/0:35,0:35:84.27:0,84,3811	0/0:9,0:9:24.08:0,24,1151
chr10	19141923	.	G	GGT	5686.67	PASS	AB=0.746;AC=38;AF=0.731;AN=52;BaseQRankSum=-2.997;DP=771;FS=9.097;HRun=0;HaplotypeScore=133.2251;InbreedingCoeff=0.1957;MQ=59.55;MQ0=13;MQRankSum=-0.192;QD=8.68;ReadPosRankSum=-3.160;VQSLOD=3.5279;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:21,1:46:12.02:123,12,0	1/1:2,0:9:9.36:117,9,0	./.	./.	0/0:22,0:25:35.76:0,36,359	0/1:18,8:26:28.39:418,0,28	0/1:21,15:36:74.57:162,0,75	1/1:34,0:33:12.41:52,12,0	1/1:4,1:16:21.01:203,21,0	1/1:19,2:33:11.48:331,11,0	1/1:12,1:18:11.89:122,12,0	1/1:24,11:35:23.58:728,24,0	1/1:20,1:25:22.06:262,22,0	0/1:13,16:29:12.77:224,0,13	0/1:15,16:31:34.39:379,0,34	0/1:12,0:26:3.93:4,0,64	0/0:14,0:26:28.41:0,28,139	0/0:7,0:24:36.15:0,36,180	1/1:16,0:21:21.69:158,22,0	1/1:9,1:22:9:79,9,0	1/1:35,0:33:14.83:132,15,0	0/1:15,8:26:15.73:180,0,16	1/1:11,8:19:0.91:158,1,0	0/1:23,26:48:71.33:542,0,71	0/1:30,5:37:99:432,0,192	1/1:22,5:38:26.38:521,26,0	1/1:15,1:29:29.98:273,30,0	1/1:4,0:5:11.73:86,12,0
chr10	19142051	.	G	GAA	21174.34	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=-17.220;DP=688;FS=0.914;HRun=0;HaplotypeScore=74.2310;InbreedingCoeff=0.9988;MQ=81.19;MQ0=0;MQRankSum=-4.892;QD=53.47;ReadPosRankSum=3.029;VQSLOD=5.4265;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,123,2004	0/0:6,0:6:18.06:0,18,293	0/0:19,0:19:51.15:0,51,718	0/0:23,0:23:54.12:0,54,756	0/0:22,0:22:63.20:0,63,1004	1/1:0,24:24:66.23:1341,66,0	1/1:0,27:28:78.27:1584,78,0	1/1:2,25:29:87.27:1678,87,0	0/0:26,0:26:78.26:0,78,1245	0/0:23,0:23:69.23:0,69,1104	0/0:20,0:20:60.20:0,60,969	1/1:2,30:31:81.28:1618,81,0	0/0:32,0:32:93.26:0,93,1454	1/1:2,25:27:75.19:1444,75,0	1/1:0,26:28:78.27:1584,78,0	1/1:0,29:28:78.27:1585,78,0	1/1:0,31:32:78.27:1585,78,0	1/1:0,20:22:60.21:1219,60,0	1/1:4,11:15:33.11:671,33,0	1/1:0,15:16:42.14:853,42,0	1/1:0,32:32:87.30:1768,87,0	1/1:1,19:22:54.06:974,54,0	1/1:0,16:16:45.11:873,45,0	1/1:0,17:17:42.14:854,42,0	1/1:1,25:27:78.22:1543,78,0	0/0:30,0:30:87.30:0,87,1417	0/0:39,0:38:99:0,117,1852	0/0:10,0:10:30.10:0,30,489
chr10	19142865	.	C	CATGT	560.93	PASS	AB=0.956;AC=9;AF=0.161;AN=56;BaseQRankSum=4.638;DP=830;FS=0.000;HRun=0;HaplotypeScore=266.1011;InbreedingCoeff=0.0467;MQ=46.75;MQ0=12;MQRankSum=-1.934;QD=2.94;ReadPosRankSum=0.761;VQSLOD=2.2901;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:45:16.60:0,17,348	0/1:8,0:8:37.34:37,0,239	0/0:38,0:26:74.83:0,75,1380	0/0:36,0:29:84.22:0,84,1550	0/0:29,0:29:47.01:0,47,636	0/0:40,0:39:78.25:0,78,737	0/0:37,0:37:37.09:0,37,232	0/0:41,0:33:71.16:0,71,890	1/1:29,0:29:3.93:25,4,0	0/1:24,2:27:99:144,0,1213	0/1:14,0:14:8.77:9,0,447	0/0:41,0:41:58.02:0,58,649	0/0:34,0:34:90.47:0,90,1311	0/0:43,0:43:72.57:0,73,781	0/0:28,0:27:22.84:0,23,381	0/0:31,0:31:22.26:0,22,543	0/0:33,0:33:60.83:0,61,802	0/0:15,0:15:18.36:0,18,173	0/0:29,0:26:73.51:0,74,875	0/0:13,0:13:19.23:0,19,235	0/0:42,0:37:44.84:0,45,542	0/1:26,0:26:4.11:4,0,142	0/1:20,0:20:0.04:0,0,79	0/0:25,0:25:24.17:0,24,216	0/0:28,0:25:38.07:0,38,362	0/1:31,6:39:99:453,0,1450	0/1:27,1:27:15.64:16,0,941	0/0:10,0:9:17.98:0,18,331
chr10	19142870	.	C	CTGCA	1716.62	PASS	AB=0.962;AC=16;AF=0.286;AN=56;BaseQRankSum=5.042;DP=843;FS=14.016;HRun=0;HaplotypeScore=279.4934;InbreedingCoeff=-0.1724;MQ=45.27;MQ0=12;MQRankSum=-2.457;QD=4.19;ReadPosRankSum=1.329;VQSLOD=0.6700;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:9,40:50:41.54:69,0,42	0/1:9,0:9:35.63:49,0,36	0/0:33,0:22:51.01:0,51,496	0/0:31,0:25:62.74:0,63,643	0/1:29,0:29:99:165,0,173	0/0:40,0:39:24.15:0,24,144	0/1:38,0:38:15.05:234,0,15	0/0:37,0:29:50.61:0,51,325	1/1:0,30:30:9.03:235,9,0	0/1:32,0:32:99:228,0,323	0/1:20,0:20:41.56:42,0,99	0/0:40,0:40:5.22:0,5,229	0/1:35,0:35:99:276,0,248	0/0:42,0:42:28.70:0,29,176	0/1:29,0:28:10.36:10,0,103	0/1:33,0:33:80.23:80,0,133	0/0:35,0:35:1.62:0,2,206	0/1:16,0:16:52.55:80,0,53	0/0:27,0:24:20.49:0,20,251	0/0:14,0:14:14.64:0,15,98	0/0:45,0:40:30.67:0,31,254	0/0:24,0:24:7.15:0,7,47	1/1:20,0:20:2.34:24,2,0	0/0:26,0:26:1.76:0,2,16	0/0:29,0:26:20.72:0,21,128	0/1:40,0:40:99:373,0,325	0/1:28,0:27:6.03:6,0,273	0/0:7,0:9:0.44:0,0,83
chr10	19142873	.	C	CATGTATGT	5845.46	PASS	AB=1.000;AC=26;AF=0.520;AN=50;BaseQRankSum=-7.532;DP=824;FS=5.096;HRun=0;HaplotypeScore=300.3799;InbreedingCoeff=0.3760;MQ=45.33;MQ0=14;MQRankSum=-0.255;QD=12.79;ReadPosRankSum=3.506;VQSLOD=2.8560;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:49:5.48:0,5,166	1/1:9,0:9:18.02:358,18,0	./.	./.	1/1:30,0:30:30.08:947,30,0	0/0:37,0:37:13.24:0,13,247	0/1:38,0:38:6.19:6,0,56	./.	1/1:30,0:30:7.43:38,7,0	1/1:33,0:33:47.96:991,48,0	1/1:20,0:20:12.02:260,12,0	0/0:40,0:40:25.60:0,26,421	1/1:36,0:37:54.08:1409,54,0	0/0:41,0:41:9.09:0,9,164	0/1:27,0:26:3.90:4,0,78	0/1:35,0:35:95.90:96,0,164	0/1:32,0:32:52.59:53,0,121	0/1:17,0:17:11.76:12,0,83	0/0:23,0:19:9.02:0,9,117	0/0:14,0:14:1.93:0,2,55	0/0:42,0:37:15.51:0,16,256	0/1:23,0:23:7.90:8,0,99	0/1:21,0:21:0:0,0,0	0/1:24,0:24:0.35:0,0,0	0/0:27,0:24:8.98:0,9,156	1/1:37,0:37:56.58:1449,57,0	1/1:19,10:33:3.01:94,3,0	1/1:9,1:9:6:122,6,0
chr10	19142909	.	TATGTATGC	T	4237.52	PASS	AB=0.945;AC=25;AF=0.446;AN=56;BaseQRankSum=4.448;DP=791;FS=5.579;HRun=0;HaplotypeScore=268.4335;InbreedingCoeff=0.4296;MQ=55.26;MQ0=11;MQRankSum=-4.919;QD=9.25;ReadPosRankSum=-0.284;VQSLOD=2.8410;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:31:50.96:0,51,936	0/0:14,0:14:39.03:0,39,742	0/0:28,0:14:35.26:0,35,441	0/0:25,0:19:41.96:0,42,443	0/0:30,0:30:53.98:0,54,1275	1/1:31,2:33:22.49:376,22,0	0/1:13,22:35:64.91:222,0,65	0/1:34,0:30:99:480,0,117	0/0:26,0:26:36:0,36,560	0/0:45,0:44:99:0,120,2201	0/0:21,0:21:32.95:0,33,584	1/1:39,2:41:3.81:737,4,0	0/0:35,0:35:90.14:0,90,2069	1/1:13,24:37:23.19:381,23,0	1/1:8,15:22:11.78:229,12,0	1/1:37,0:37:26.26:307,26,0	0/1:31,0:31:48.98:49,0,230	0/1:15,0:15:50.17:60,0,50	0/1:19,0:18:82.26:330,0,82	0/1:20,0:20:12.17:12,0,18	0/1:36,0:34:99:132,0,123	1/1:24,2:26:6.38:124,6,0	1/1:4,17:21:3.08:49,3,0	1/1:22,1:23:23.73:191,24,0	1/1:24,3:25:37.49:559,37,0	0/0:32,0:32:93.20:0,93,1859	0/0:35,0:35:61.86:0,62,868	0/0:10,0:10:20.92:0,21,335
chr10	19142913	.	TATGC	T	5040.52	PASS	AB=1.000;AC=31;AF=0.554;AN=56;BaseQRankSum=5.915;DP=788;FS=13.043;HRun=0;HaplotypeScore=231.1316;InbreedingCoeff=0.8492;MQ=58.16;MQ0=10;MQRankSum=-5.523;QD=11.15;ReadPosRankSum=-0.217;VQSLOD=2.3925;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:31:56.93:0,57,673	0/0:14,0:14:39.02:0,39,506	0/0:29,0:17:41.10:0,41,503	0/0:28,0:22:50.11:0,50,555	0/0:31,0:31:54.08:0,54,886	1/1:7,27:34:28.33:430,28,0	1/1:29,3:32:6.83:170,7,0	1/1:35,0:33:84.02:780,84,0	0/0:25,0:25:41.99:0,42,475	0/0:43,0:43:99:0,114,1245	0/0:22,0:22:35.98:0,36,423	1/1:10,30:41:42.14:659,42,0	0/0:35,0:35:89.94:0,90,1410	1/1:32,5:37:24:303,24,0	1/1:20,2:22:12.01:155,12,0	1/1:16,0:37:27.08:404,27,0	0/1:30,0:30:29.05:133,0,29	1/1:4,0:15:3.01:32,3,0	1/1:19,0:18:45.80:476,46,0	1/1:3,16:19:8.97:84,9,0	1/1:35,0:33:47.98:589,48,0	1/1:6,20:26:11.43:106,11,0	1/1:18,2:20:2.90:51,3,0	1/1:22,2:24:23.88:191,24,0	1/1:22,4:25:45.02:478,45,0	0/0:35,0:35:97.41:0,97,983	0/0:33,0:33:64.45:0,64,596	0/0:9,0:9:20.88:0,21,213
chr10	19142916	.	GCA	G	290.92	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=9.065;DP=738;FS=11.861;HRun=0;HaplotypeScore=195.2985;InbreedingCoeff=0.4286;MQ=60.91;MQ0=7;MQRankSum=-8.419;QD=1.02;ReadPosRankSum=3.915;VQSLOD=1.4732;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:33:63.21:0,63,1210	0/0:14,0:14:39.13:0,39,750	0/0:32,0:20:58.43:0,58,1118	0/0:27,0:23:63.89:0,64,1190	0/0:32,0:32:60.08:0,60,1093	0/1:32,0:32:28.86:45,0,29	1/1:27,0:27:11:50,11,0	0/0:31,0:30:79.56:0,80,471	0/0:26,0:26:45.15:0,45,866	0/0:42,0:42:91.05:0,91,2073	0/0:22,0:22:36.01:0,36,691	1/1:35,0:35:7.37:86,7,0	0/0:36,0:36:76.33:0,76,1659	0/1:34,0:34:24.02:24,0,26	1/1:20,0:20:0.69:24,1,0	1/1:22,7:29:26.31:173,26,0	0/1:21,0:21:10.27:10,0,138	1/1:11,1:12:2.84:14,3,0	0/0:18,0:17:29.94:0,30,253	0/0:17,0:17:8.27:0,8,47	0/1:33,0:32:13.15:13,0,130	0/1:24,0:24:12.31:12,0,46	1/1:19,0:19:2.57:8,3,0	0/0:20,0:20:23.47:0,23,162	0/0:24,0:23:9.36:0,9,173	0/0:36,0:36:99:0,105,1802	0/0:32,0:32:66.19:0,66,1298	0/0:9,0:9:21.07:0,21,378
chr10	19142919	.	TGC	T	125.19	PASS	AB=1.000;AC=12;AF=0.214;AN=56;BaseQRankSum=9.195;DP=738;FS=9.067;HRun=0;HaplotypeScore=192.7154;InbreedingCoeff=0.3562;MQ=62.75;MQ0=6;MQRankSum=-8.340;QD=0.55;ReadPosRankSum=3.888;VQSLOD=1.8060;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:63.21:0,63,1069	0/0:14,0:14:39.13:0,39,759	0/0:33,0:21:61.45:0,61,1156	0/0:27,0:24:63.42:0,63,1185	0/0:34,0:34:66.10:0,66,1300	0/1:31,0:31:20.35:20,0,53	0/1:27,0:27:3.06:3,0,42	0/0:35,0:34:96.63:0,97,704	0/0:26,0:26:47.98:0,48,735	0/0:42,0:42:99:0,117,2150	0/0:23,0:23:39:0,39,735	0/1:34,0:34:5.87:33,0,6	0/0:36,0:36:99:0,99,1928	0/0:30,0:30:4.29:0,4,52	0/1:19,0:19:1.27:1,0,47	1/1:22,7:29:23.37:152,23,0	0/1:21,0:21:10.21:10,0,128	1/1:11,1:12:5.87:36,6,0	0/0:23,0:22:49.40:0,49,531	0/0:17,0:17:8.44:0,8,51	0/1:34,0:33:0.33:0,0,186	0/0:25,0:25:7.42:0,7,104	1/1:19,0:19:2.39:6,2,0	0/0:17,0:17:23.79:0,24,177	0/0:21,0:20:25.37:0,25,250	0/0:35,0:35:96.28:0,96,1819	0/0:32,0:32:66.19:0,66,1312	0/0:9,0:9:27.07:0,27,474
chr10	19143667	.	T	TG	5604.77	PASS	AC=30;AF=0.556;AN=54;BaseQRankSum=14.861;DP=478;FS=25.040;HRun=0;HaplotypeScore=115.9342;InbreedingCoeff=0.9682;MQ=89.07;MQ0=1;MQRankSum=-14.899;QD=29.34;ReadPosRankSum=0.717;VQSLOD=3.2667;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,117,1584	0/0:12,0:12:36.12:0,36,504	0/0:21,0:21:60.19:0,60,811	0/0:24,0:24:41.52:0,42,796	0/0:32,0:32:87.28:0,87,1200	1/1:0,14:14:27.09:430,27,0	1/1:1,8:9:21.07:334,21,0	1/1:10,8:17:30.02:419,30,0	0/0:22,0:22:66.21:0,66,905	0/0:27,0:27:78.22:0,78,1055	0/0:12,0:12:33.11:0,33,462	1/1:1,11:12:18.06:286,18,0	0/0:24,0:24:72.23:0,72,989	1/1:0,16:16:36.12:570,36,0	1/1:0,15:15:30.10:477,30,0	1/1:3,14:17:20.99:303,21,0	1/1:0,4:4:9.03:143,9,0	1/1:0,7:7:18.06:287,18,0	1/1:3,4:7:12.04:184,12,0	1/1:0,14:14:30.10:467,30,0	./.	1/1:1,17:18:33.11:523,33,0	1/1:3,15:18:27.09:429,27,0	1/1:1,3:4:6.02:85,6,0	1/1:0,18:17:42.14:667,42,0	0/0:20,0:20:60.20:0,60,839	0/0:38,0:38:99:0,111,1552	0/0:13,0:13:39.13:0,39,545
chr10	19143683	.	TATGGA	T	7645.26	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=15.185;DP=464;FS=25.332;HRun=0;HaplotypeScore=130.7240;InbreedingCoeff=0.9226;MQ=90.74;MQ0=0;MQRankSum=-14.725;QD=41.55;ReadPosRankSum=1.197;VQSLOD=3.1393;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,123,3662	0/0:11,0:11:33.11:0,33,1045	0/0:25,0:25:72.25:0,72,2162	0/0:20,0:20:46.92:0,47,1313	0/0:28,0:28:81.28:0,81,2568	1/1:3,10:13:21.07:456,21,0	1/1:1,8:9:15.05:325,15,0	1/1:2,10:12:12.04:230,12,0	0/0:17,0:17:51.16:0,51,1525	0/0:27,0:27:78.27:0,78,2476	0/0:15,0:15:42.14:0,42,1288	1/1:3,10:13:18.06:390,18,0	0/0:26,0:26:78.25:0,78,2352	1/1:3,14:17:33.11:715,33,0	1/1:0,13:13:30.10:650,30,0	1/1:1,14:15:30.10:651,30,0	1/1:0,2:2:6.02:130,6,0	1/1:1,6:7:15.05:326,15,0	1/1:2,7:9:12.03:203,12,0	1/1:2,13:15:36.12:780,36,0	1/1:1,1:2:3.01:65,3,0	1/1:2,15:17:39.13:846,39,0	1/1:2,17:19:45.15:968,45,0	1/1:0,4:4:3.01:65,3,0	1/1:3,14:16:39.13:846,39,0	0/0:23,0:23:66.23:0,66,2005	0/0:31,0:31:93.32:0,93,2925	0/0:16,0:16:48.15:0,48,1452
chr10	19143913	.	A	AT	5779.01	PASS	AB=0.938;AC=33;AF=0.589;AN=56;BaseQRankSum=17.627;DP=598;FS=17.482;HRun=9;HaplotypeScore=148.0307;InbreedingCoeff=0.9562;MQ=72.80;MQ0=0;MQRankSum=-8.909;QD=15.37;ReadPosRankSum=-2.286;VQSLOD=3.0436;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,1:35:59.13:0,59,727	0/0:9,0:9:23.99:0,24,208	0/0:19,0:19:23.73:0,24,193	0/0:14,0:13:29.37:0,29,228	0/0:27,1:28:35.77:0,36,536	1/1:24,0:24:56.51:418,57,0	1/1:13,0:13:29.59:203,30,0	1/1:33,0:33:64.47:408,64,0	0/0:18,0:18:38.98:0,39,339	0/1:28,2:30:0.41:0,0,448	0/0:18,0:18:35.95:0,36,308	1/1:19,0:19:47.44:334,47,0	0/0:26,0:26:65.93:0,66,565	1/1:26,0:26:74.20:529,74,0	1/1:30,0:30:74.20:530,74,0	1/1:27,0:27:74.34:550,74,0	1/1:28,0:28:62.10:413,62,0	1/1:13,0:13:29.46:186,29,0	1/1:17,0:17:38.18:239,38,0	1/1:21,0:21:47.61:351,48,0	1/1:16,0:16:32.45:209,32,0	1/1:20,0:20:59.54:449,60,0	1/1:16,0:16:32.82:255,33,0	1/1:22,0:22:50.37:351,50,0	1/1:21,0:21:47.62:354,48,0	0/0:19,0:19:44.98:0,45,391	0/0:32,0:32:77.93:0,78,673	0/0:4,0:4:12:0,12,104
chr10	19143920	.	T	TC	11996.38	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=18.244;DP=595;FS=21.168;HRun=0;HaplotypeScore=115.5425;InbreedingCoeff=0.9953;MQ=66.92;MQ0=0;MQRankSum=-10.227;QD=33.70;ReadPosRankSum=0.770;VQSLOD=3.2007;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:98.12:0,98,1337	0/0:10,0:10:27.08:0,27,362	0/0:15,0:15:38.77:0,39,453	0/0:13,0:12:36.09:0,36,458	0/0:29,0:29:73.80:0,74,1002	1/1:0,25:25:57.18:808,57,0	1/1:0,14:14:30.10:421,30,0	1/1:2,31:33:75.21:1010,75,0	0/0:15,0:15:45.13:0,45,598	0/0:25,0:25:63.92:0,64,910	0/0:17,0:17:51.12:0,51,635	1/1:0,18:18:48.16:682,48,0	0/0:26,0:26:75.19:0,75,994	1/1:0,27:27:75.25:1066,75,0	1/1:0,33:33:75.25:1065,75,0	1/1:0,30:30:75.23:1064,75,0	1/1:0,27:27:66.14:915,66,0	1/1:0,14:14:30.10:428,30,0	1/1:0,16:16:48.12:628,48,0	1/1:0,21:21:51.10:699,51,0	1/1:1,14:15:33.11:471,33,0	1/1:0,23:23:60.20:850,60,0	1/1:0,18:18:33.11:467,33,0	1/1:0,20:20:54.09:742,54,0	1/1:0,22:22:48.16:681,48,0	0/0:17,0:17:51.15:0,51,681	0/0:33,0:33:96.26:0,96,1242	0/0:4,0:4:12.04:0,12,167
chr10	19144042	.	G	GGGAGGACCCAGTCCACTATCA	45006.86	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=7.484;DP=635;FS=20.179;HRun=0;HaplotypeScore=303.4102;InbreedingCoeff=0.9387;MQ=62.29;MQ0=0;MQRankSum=-18.118;QD=134.75;ReadPosRankSum=1.164;VQSLOD=3.3512;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,163,9210	0/0:9,0:9:21.07:0,21,949	0/0:21,0:21:63.22:0,63,2965	0/0:29,0:29:78.23:0,78,3494	0/0:25,0:25:75.24:0,75,4110	1/1:18,2:21:30.10:2005,30,0	1/1:21,0:21:42.14:3783,42,0	1/1:34,0:34:75.21:4133,75,0	0/0:25,0:25:75.23:0,75,3591	0/0:32,0:32:93.32:0,93,4976	0/0:17,0:17:51.16:0,51,2532	1/1:18,7:27:45.15:4092,45,0	0/0:29,0:29:87.30:0,87,4643	1/1:17,9:29:33.11:2905,33,0	1/1:21,7:30:60.20:4901,60,0	1/1:14,5:20:33.11:3121,33,0	1/1:15,2:18:0.28:2601,0,0	1/1:4,5:10:24.08:2137,24,0	1/1:15,2:17:33.09:2736,33,0	1/1:20,6:26:36.12:2908,36,0	1/1:9,1:10:2.97:20,3,0	1/1:11,10:21:24.08:2418,24,0	1/1:8,5:13:24.08:1990,24,0	1/1:10,1:13:21.07:1984,21,0	1/1:14,8:24:36.12:3273,36,0	0/0:23,0:23:69.24:0,69,3565	0/0:26,0:26:78.27:0,78,4035	0/0:11,0:11:33.11:0,33,1643
chr10	19144771	.	A	AAT	3853.76	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=15.905;DP=496;FS=41.496;HRun=0;HaplotypeScore=141.6392;InbreedingCoeff=0.9503;MQ=93.13;MQ0=0;MQRankSum=-15.482;QD=22.94;ReadPosRankSum=1.232;VQSLOD=2.2039;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:60,0:60:99:0,181,2878	0/0:12,0:12:36.11:0,36,553	0/0:25,0:25:75.21:0,75,1128	0/0:33,0:33:92.64:0,93,1394	0/0:29,0:29:81.28:0,81,1318	1/1:0,9:9:15.05:177,15,0	1/1:1,5:6:13.27:133,13,0	1/1:0,11:11:33.11:455,33,0	0/0:31,0:31:93.32:0,93,1514	0/0:25,0:25:75.26:0,75,1223	0/0:15,0:15:45.15:0,45,734	1/1:0,12:12:21.06:239,21,0	0/0:32,0:32:96.31:0,96,1540	1/1:0,19:19:31.33:348,31,0	1/1:1,13:14:27.08:307,27,0	1/1:0,20:20:36.07:406,36,0	1/1:0,12:12:26.10:284,26,0	1/1:0,10:10:30.08:393,30,0	1/1:0,4:4:6.02:81,6,0	1/1:0,6:6:9.03:105,9,0	1/1:1,9:10:23.52:234,24,0	1/1:0,10:10:26.20:279,26,0	1/1:0,6:6:6.02:68,6,0	1/1:0,9:9:11.55:139,12,0	1/1:0,10:10:19.30:206,19,0	0/0:28,0:28:84.29:0,84,1370	0/0:26,0:26:78.27:0,78,1264	0/0:12,0:12:36.12:0,36,587
chr10	19144772	.	GCAA	G	3481.49	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=15.855;DP=493;FS=42.834;HRun=0;HaplotypeScore=150.3682;InbreedingCoeff=0.9499;MQ=93.05;MQ0=0;MQRankSum=-15.462;QD=20.85;ReadPosRankSum=1.587;VQSLOD=1.8138;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:59,0:59:99:0,178,4182	0/0:11,0:11:33.11:0,33,798	0/0:24,0:24:69.23:0,69,1564	0/0:32,0:32:88.01:0,88,1798	0/0:30,0:30:90.25:0,90,1968	1/1:0,9:9:15.03:153,15,0	1/1:0,5:5:12.02:115,12,0	1/1:0,11:11:33.10:401,33,0	0/0:31,0:31:93.30:0,93,2236	0/0:25,0:25:75.26:0,75,1820	0/0:15,0:15:45.15:0,45,1106	1/1:0,12:12:21.04:205,21,0	0/0:32,0:32:96.33:0,96,2357	1/1:0,19:19:33.05:321,33,0	1/1:1,13:14:27.05:263,27,0	1/1:0,20:20:35.94:346,36,0	1/1:0,12:12:29.89:277,30,0	1/1:0,10:10:30.08:348,30,0	1/1:0,4:4:6.02:71,6,0	1/1:0,6:6:9.02:90,9,0	1/1:1,9:10:27.03:257,27,0	1/1:0,10:10:30.04:286,30,0	1/1:0,6:6:6.01:58,6,0	1/1:0,9:9:11.55:93,12,0	1/1:0,10:10:21.02:198,21,0	0/0:28,0:28:84.28:0,84,1980	0/0:27,0:27:81.20:0,81,1793	0/0:12,0:12:36.12:0,36,879
chr10	19144812	.	CATA	C	7295.49	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=15.928;DP=596;FS=119.421;HRun=0;HaplotypeScore=143.0768;InbreedingCoeff=0.9686;MQ=87.67;MQ0=0;MQRankSum=-11.964;QD=27.85;ReadPosRankSum=-0.844;VQSLOD=1.6873;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,150,3225	0/0:10,0:10:30.09:0,30,621	0/0:22,0:22:63.17:0,63,1328	0/0:28,0:28:71.38:0,71,1536	0/0:31,0:31:93.29:0,93,1947	1/1:3,14:17:9.03:149,9,0	1/1:1,18:19:24.08:399,24,0	1/1:2,20:22:45.07:689,45,0	0/0:29,0:29:84.27:0,84,1782	0/0:34,0:34:99:0,99,2130	0/0:18,0:18:54.17:0,54,1140	1/1:3,18:21:39.13:647,39,0	0/0:37,0:37:99:0,111,2433	1/1:3,22:25:45.15:732,45,0	1/1:1,19:20:39.13:643,39,0	1/1:2,27:29:60.21:995,60,0	1/1:1,10:11:27.09:443,27,0	1/1:3,9:12:18.06:288,18,0	1/1:4,14:18:42.09:592,42,0	1/1:1,8:9:18.06:296,18,0	1/1:6,7:13:9.03:147,9,0	1/1:0,15:15:39.13:632,39,0	1/1:0,7:7:14.93:249,15,0	1/1:1,10:11:9.03:149,9,0	1/1:2,11:13:15.05:247,15,0	0/0:31,0:31:93.31:0,93,2052	0/0:24,0:24:69.24:0,69,1546	0/0:19,0:19:57.20:0,57,1222
chr10	19144920	.	GTC	G	4777.62	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=14.906;DP=533;FS=14.114;HRun=0;HaplotypeScore=126.4032;InbreedingCoeff=0.9373;MQ=99.02;MQ0=0;MQRankSum=-14.622;QD=24.88;ReadPosRankSum=0.536;VQSLOD=4.9761;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:65,0:65:99:0,190,3412	0/0:9,0:9:24.08:0,24,440	0/0:39,0:39:99:0,104,1824	0/0:28,0:28:62.89:0,63,1155	0/0:40,0:40:99:0,117,2105	1/1:1,5:6:12.04:171,12,0	1/1:1,6:7:15.05:214,15,0	1/1:1,7:8:21.05:281,21,0	0/0:30,0:30:87.27:0,87,1525	0/0:31,0:31:90.30:0,90,1614	0/0:22,0:22:63.22:0,63,1143	1/1:1,8:9:21.07:300,21,0	0/0:20,0:20:60.21:0,60,1100	1/1:0,9:9:18.06:257,18,0	1/1:2,6:8:9.03:129,9,0	1/1:2,5:7:12.04:171,12,0	1/1:1,8:9:15.05:214,15,0	1/1:2,6:8:12.04:171,12,0	1/1:1,6:7:12.04:172,12,0	1/1:0,32:32:51.17:728,51,0	1/1:3,8:11:6.02:86,6,0	1/1:1,17:18:33.11:471,33,0	1/1:2,17:19:33.11:471,33,0	1/1:2,6:8:9.03:129,9,0	1/1:1,25:26:57.19:813,57,0	0/0:25,0:25:75.25:0,75,1347	0/0:29,0:28:84.27:0,84,1509	0/0:3,0:3:9.03:0,9,165
chr10	19145073	.	CTT	C	6241.03	PASS	AC=30;AF=0.556;AN=54;BaseQRankSum=15.914;DP=454;FS=10.684;HRun=2;HaplotypeScore=89.6844;InbreedingCoeff=0.9487;MQ=97.16;MQ0=0;MQRankSum=-14.926;QD=34.10;ReadPosRankSum=0.114;VQSLOD=3.7735;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:96.30:0,96,1851	0/0:9,0:9:27.08:0,27,491	0/0:27,0:27:81.24:0,81,1570	0/0:26,0:26:75.26:0,75,1490	0/0:32,0:32:96.30:0,96,1855	1/1:0,16:16:30.10:476,30,0	1/1:0,7:7:21.07:341,21,0	1/1:1,13:14:33.06:507,33,0	0/0:24,0:24:72.25:0,72,1462	0/0:23,0:23:69.24:0,69,1388	0/0:21,0:21:63.20:0,63,1235	1/1:0,15:15:27.09:438,27,0	0/0:23,0:23:69.23:0,69,1368	1/1:0,9:9:24.08:379,24,0	1/1:0,11:11:12.04:195,12,0	1/1:1,10:11:21.07:341,21,0	1/1:0,8:8:15.05:244,15,0	./.	1/1:0,12:12:24.05:357,24,0	1/1:1,18:19:33.11:535,33,0	1/1:0,8:8:15.05:244,15,0	1/1:0,10:10:24.08:384,24,0	1/1:0,17:17:45.15:730,45,0	1/1:0,3:3:3.01:49,3,0	1/1:0,23:23:63.22:1021,63,0	0/0:25,0:25:75.26:0,75,1523	0/0:26,0:26:78.27:0,78,1560	0/0:2,0:2:6.02:0,6,122
chr10	19145158	.	GCCTCC	G	8115.77	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=15.443;DP=394;FS=8.673;HRun=0;HaplotypeScore=122.9801;InbreedingCoeff=0.9244;MQ=73.47;MQ0=0;MQRankSum=-15.173;QD=44.11;ReadPosRankSum=1.314;VQSLOD=4.6087;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:78.24:0,78,2308	0/0:11,0:11:33.10:0,33,955	0/0:13,0:12:27.09:0,27,695	0/0:14,0:14:28.21:0,28,745	0/0:36,0:36:99:0,105,3123	1/1:1,15:16:39.13:827,39,0	1/1:3,6:9:23.97:421,24,0	1/1:8,7:15:25.24:431,25,0	0/0:10,0:10:27.98:0,28,821	0/0:23,0:23:63.20:0,63,1695	0/0:7,0:7:21.06:0,21,543	1/1:0,15:16:36.12:758,36,0	0/0:18,0:18:54.14:0,54,1469	1/1:3,9:12:21.07:422,21,0	1/1:1,18:19:48.16:1019,48,0	1/1:0,14:15:36.09:726,36,0	1/1:0,4:4:3.01:65,3,0	1/1:1,6:7:6.02:129,6,0	1/1:3,11:14:30.01:552,30,0	1/1:3,15:18:48.16:1015,48,0	1/1:0,4:4:3.01:65,3,0	1/1:3,13:16:45.06:867,45,0	1/1:2,5:7:15.05:311,15,0	1/1:0,8:8:12.04:252,12,0	1/1:0,4:4:12.04:256,12,0	0/0:18,0:18:51.17:0,51,1472	0/0:25,0:24:72.23:0,72,2106	0/0:9,0:9:27.09:0,27,786
chr10	19145174	.	T	TA	5743.56	PASS	AC=30;AF=0.556;AN=54;BaseQRankSum=15.295;DP=435;FS=13.905;HRun=3;HaplotypeScore=115.1387;InbreedingCoeff=0.9164;MQ=78.01;MQ0=0;MQRankSum=-14.247;QD=27.48;ReadPosRankSum=-0.744;VQSLOD=3.0594;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:69.21:0,69,827	0/0:7,0:7:21.06:0,21,252	0/0:18,0:18:46.23:0,46,482	0/0:14,0:15:1.18:0,1,242	0/0:34,0:34:96.28:0,96,1141	1/1:0,22:22:56.85:661,57,0	1/1:1,12:13:33.07:429,33,0	1/1:2,14:16:42.14:585,42,0	0/0:13,0:13:36.10:0,36,420	0/0:25,0:25:75.22:0,75,891	0/0:10,0:10:27.07:0,27,314	1/1:3,16:20:44.98:580,45,0	0/0:16,0:16:48.14:0,48,565	1/1:2,10:12:24.08:330,24,0	1/1:0,19:19:45.15:609,45,0	1/1:3,16:19:42.07:552,42,0	1/1:2,2:4:2.92:17,3,0	1/1:3,5:8:6.02:83,6,0	1/1:7,6:13:18.06:249,18,0	1/1:5,16:21:50.99:616,51,0	./.	1/1:2,12:14:33.02:420,33,0	1/1:2,10:12:29.77:309,30,0	1/1:1,10:11:12.04:159,12,0	1/1:1,4:5:12:142,12,0	0/0:22,0:22:60.17:0,60,709	0/0:27,0:26:78.20:0,78,898	0/0:9,0:9:27.08:0,27,324
chr10	19145484	.	CACCT	C	3869.33	PASS	AB=0.976;AC=23;AF=0.411;AN=56;BaseQRankSum=15.343;DP=477;FS=0.000;HRun=0;HaplotypeScore=138.5236;InbreedingCoeff=0.3625;MQ=89.74;MQ0=0;MQRankSum=-15.291;QD=17.43;ReadPosRankSum=4.547;VQSLOD=3.1890;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:57.14:0,57,1286	0/0:12,0:12:36.07:0,36,751	0/0:26,0:26:75.21:0,75,1721	0/0:28,0:28:81.22:0,81,2020	0/0:26,0:26:78.19:0,78,1830	1/1:14,0:14:39.12:471,39,0	0/1:10,0:10:59.31:165,0,59	0/1:36,0:36:99:462,0,174	0/0:22,0:22:33.11:0,33,798	0/0:31,0:31:90.30:0,90,2338	0/0:12,0:12:36.12:0,36,1025	1/1:14,0:14:13.01:379,13,0	0/0:26,0:26:78.25:0,78,2077	1/1:6,2:8:18.06:228,18,0	0/1:22,2:24:18.91:516,0,19	0/1:13,1:14:84.41:263,0,84	1/1:6,0:6:10.35:109,10,0	0/1:9,0:9:27.94:91,0,28	0/1:12,0:12:1.15:181,0,1	1/1:14,0:14:12.06:285,12,0	0/1:13,0:13:31.12:38,0,31	0/1:12,1:13:4.02:177,0,4	1/1:6,0:6:6.02:72,6,0	0/1:12,0:12:23.08:76,0,23	1/1:17,0:17:29.10:356,29,0	0/0:22,0:22:66.23:0,66,1847	0/0:22,0:22:66.18:0,66,1652	0/0:7,0:7:21.07:0,21,597
chr10	19145485	.	ACCT	A	5619.58	PASS	AB=0.967;AC=30;AF=0.536;AN=56;BaseQRankSum=15.562;DP=468;FS=0.391;HRun=0;HaplotypeScore=122.0710;InbreedingCoeff=0.8240;MQ=88.81;MQ0=0;MQRankSum=-15.835;QD=26.14;ReadPosRankSum=1.145;VQSLOD=4.8296;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:54.15:0,54,1146	0/0:11,0:11:27.09:0,27,581	0/0:25,0:25:72.23:0,72,1455	0/0:27,0:27:75.26:0,75,1659	0/0:26,0:26:72.25:0,72,1549	1/1:13,0:13:39.13:550,39,0	1/1:10,0:10:21.05:259,21,0	1/1:26,7:35:81.20:1064,81,0	0/0:23,0:23:36.12:0,36,786	0/0:31,0:31:87.30:0,87,1956	0/0:12,0:12:36.12:0,36,829	1/1:12,0:12:33.09:428,33,0	0/0:25,0:25:75.26:0,75,1716	1/1:8,0:8:18.06:246,18,0	1/1:23,0:23:48.09:611,48,0	0/1:13,1:14:35.36:358,0,35	1/1:3,3:6:18.06:242,18,0	0/1:8,0:8:8.59:116,0,9	1/1:9,3:12:27.09:372,27,0	1/1:13,1:14:27.08:368,27,0	1/1:6,6:12:4.83:47,5,0	1/1:13,0:13:18.05:237,18,0	1/1:5,0:6:6.02:86,6,0	1/1:12,0:12:11.86:101,12,0	1/1:16,1:17:39.13:536,39,0	0/0:22,0:22:66.23:0,66,1483	0/0:22,0:22:63.20:0,63,1370	0/0:7,0:7:21.07:0,21,483
chr10	19145487	.	CTCCCT	C	6051.51	PASS	AB=0.591;AC=31;AF=0.554;AN=56;BaseQRankSum=15.661;DP=441;FS=0.000;HRun=0;HaplotypeScore=129.3813;InbreedingCoeff=0.8861;MQ=90.96;MQ0=0;MQRankSum=-16.026;QD=31.68;ReadPosRankSum=1.812;VQSLOD=4.5449;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:54.13:0,54,1120	0/0:9,0:9:27.08:0,27,736	0/0:26,0:26:75.25:0,75,1905	0/0:26,0:26:78.27:0,78,2252	0/0:24,0:24:72.22:0,72,2012	1/1:0,13:13:39.13:614,39,0	1/1:1,5:7:21.05:276,21,0	1/1:11,17:28:78.36:1087,78,0	0/0:23,0:23:36.12:0,36,830	0/0:31,0:31:90.30:0,90,2532	0/0:12,0:12:36.12:0,36,1132	1/1:0,10:12:33.10:459,33,0	0/0:26,0:26:78.27:0,78,2307	1/1:2,5:8:14.66:260,15,0	1/1:2,17:20:48.13:666,48,0	0/1:4,9:13:36.21:390,0,36	1/1:3,3:6:18.03:241,18,0	1/1:2,5:7:9.03:146,9,0	1/1:3,7:10:27.01:385,27,0	1/1:2,13:15:27.09:418,27,0	1/1:8,3:11:8.43:67,8,0	1/1:2,10:12:18.05:266,18,0	1/1:0,3:4:6.02:96,6,0	1/1:0,9:9:11.96:115,12,0	1/1:1,13:16:39.10:565,39,0	0/0:22,0:22:66.23:0,66,2042	0/0:22,0:22:66.20:0,66,1904	0/0:7,0:7:21.07:0,21,643
chr10	19145489	.	CCCT	C	3888.30	PASS	AB=1.000;AC=31;AF=0.554;AN=56;BaseQRankSum=15.776;DP=445;FS=0.391;HRun=0;HaplotypeScore=121.7612;InbreedingCoeff=0.8848;MQ=92.19;MQ0=0;MQRankSum=-15.776;QD=20.04;ReadPosRankSum=1.613;VQSLOD=3.5020;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:48.15:0,48,659	0/0:9,0:9:24.06:0,24,480	0/0:27,0:27:68.96:0,69,1234	0/0:27,0:27:81.18:0,81,1493	0/0:24,0:24:66.21:0,66,1340	1/1:15,0:15:38.01:409,38,0	1/1:6,1:7:17.83:165,18,0	1/1:30,0:30:73.77:660,74,0	0/0:23,0:23:36.11:0,36,494	0/0:32,0:32:93.28:0,93,1689	0/0:12,0:12:36.12:0,36,777	1/1:10,2:12:32.86:316,33,0	0/0:27,0:27:81.25:0,81,1577	1/1:7,1:8:15.81:178,16,0	1/1:19,1:20:47.56:449,48,0	0/1:12,0:12:12.39:236,0,12	1/1:6,0:6:17.89:153,18,0	1/1:7,0:7:9.02:96,9,0	1/1:10,0:10:26.92:248,27,0	1/1:15,0:15:26.94:271,27,0	1/1:11,0:11:6.64:42,7,0	1/1:11,0:11:17.78:170,18,0	1/1:4,0:4:6.02:64,6,0	1/1:10,0:10:10.92:63,11,0	1/1:14,2:16:38.84:369,39,0	0/0:22,0:22:66.23:0,66,1425	0/0:21,0:21:60.20:0,60,1282	0/0:7,0:7:21.07:0,21,413
chr10	19145493	.	C	CA	2020.85	PASS	AB=0.684;AC=28;AF=0.500;AN=56;BaseQRankSum=14.212;DP=474;FS=1.330;HRun=0;HaplotypeScore=124.1332;InbreedingCoeff=0.6843;MQ=88.33;MQ0=0;MQRankSum=-14.296;QD=8.90;ReadPosRankSum=2.476;VQSLOD=4.0073;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:47.71:0,48,233	0/0:8,0:8:21.07:0,21,293	0/0:25,0:25:69.17:0,69,884	0/0:27,0:27:81.15:0,81,1014	0/0:23,0:23:69.20:0,69,909	1/1:3,13:16:44.39:296,44,0	1/1:3,5:8:13.92:81,14,0	1/1:14,17:31:2.86:332,3,0	0/0:22,0:22:31.29:0,31,185	0/0:29,0:29:78.23:0,78,1023	0/0:14,0:14:39.12:0,39,522	1/1:4,10:14:25.43:153,25,0	0/0:27,0:27:78.23:0,78,1038	1/1:7,5:12:21.62:161,22,0	1/1:5,17:22:36.73:233,37,0	1/1:4,9:13:3.27:124,3,0	0/1:6,3:9:10.96:50,0,11	1/1:2,5:7:11.86:82,12,0	1/1:6,7:13:4.73:155,5,0	1/1:6,13:19:22.98:168,23,0	0/1:13,3:16:3.36:53,0,3	1/1:4,10:14:17.58:132,18,0	1/1:2,2:4:5.95:41,6,0	0/1:4,9:13:10.07:10,0,16	0/1:3,13:16:2.75:156,0,3	0/0:23,0:23:66.22:0,66,911	0/0:21,0:21:63.21:0,63,872	0/0:7,0:7:20.97:0,21,251
chr10	19145771	.	AT	A	3040.14	PASS	AB=0.944;AC=31;AF=0.554;AN=56;BaseQRankSum=14.900;DP=520;FS=9.340;HRun=1;HaplotypeScore=120.5994;InbreedingCoeff=0.9335;MQ=74.40;MQ0=0;MQRankSum=-0.001;QD=9.97;ReadPosRankSum=-1.573;VQSLOD=0.3105;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:81.27:0,81,1233	0/0:7,0:7:21.07:0,21,321	0/0:14,0:14:41.91:0,42,547	0/0:11,0:11:30.03:0,30,389	0/0:24,0:24:69.22:0,69,1032	1/1:16,0:16:30.88:154,31,0	1/1:19,0:19:45.82:247,46,0	1/1:32,0:32:54.29:386,54,0	0/0:21,0:21:63.20:0,63,939	0/0:26,0:26:78.25:0,78,1158	0/0:20,0:20:57.18:0,57,850	1/1:18,0:18:40.88:239,41,0	0/0:12,0:12:36.12:0,36,547	1/1:23,1:24:44.44:265,44,0	1/1:26,0:26:51.48:313,51,0	1/1:18,0:18:35.65:208,36,0	1/1:21,1:22:38.15:203,38,0	1/1:9,0:9:20.42:157,20,0	1/1:15,0:15:34.41:277,34,0	1/1:25,0:25:24.06:172,24,0	1/1:12,0:12:27.43:158,27,0	0/1:16,1:17:7.33:23,0,7	1/1:18,1:19:33.48:168,33,0	1/1:14,0:14:32.44:178,32,0	1/1:18,1:19:13.28:119,13,0	0/0:29,0:29:87.28:0,87,1294	0/0:17,0:17:51.16:0,51,756	0/0:7,0:7:21.07:0,21,321
chr10	19146004	.	TACACACAC	T	4990.63	PASS	AB=0.833;AC=20;AF=0.370;AN=54;BaseQRankSum=4.727;DP=626;FS=0.540;HRun=0;HaplotypeScore=180.2273;InbreedingCoeff=0.7391;MQ=70.18;MQ0=6;MQRankSum=-8.300;QD=19.42;ReadPosRankSum=2.521;VQSLOD=3.8940;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:26:9.04:0,9,319	0/0:7,0:7:9.03:0,9,338	0/0:35,0:27:3.01:0,3,121	0/0:33,0:25:9.03:0,9,183	0/0:14,0:23:21.07:0,21,725	1/1:13,10:24:12.02:251,12,0	./.	0/0:29,0:29:25.33:0,25,571	0/0:17,0:19:12.04:0,12,242	0/0:12,0:24:63.22:0,63,2062	0/0:8,0:12:15.05:0,15,527	1/1:17,19:37:39.56:984,40,0	0/0:10,0:18:30.09:0,30,1012	1/1:10,12:24:27.09:661,27,0	1/1:11,14:26:39.13:964,39,0	1/1:13,0:35:54.19:1001,54,0	1/1:16,0:19:6.02:112,6,0	0/1:11,0:13:28.33:47,0,28	0/0:12,0:17:13.28:0,13,204	0/0:11,0:25:30:0,30,292	0/0:21,0:29:21.03:0,21,268	1/1:5,8:15:14.88:358,15,0	1/1:7,10:17:12.98:304,13,0	0/1:21,7:28:99:141,0,139	1/1:11,7:19:8.92:167,9,0	0/0:14,0:20:51.65:0,52,1812	0/0:6,0:16:21.07:0,21,679	0/0:11,0:12:15.05:0,15,496
chr10	19146112	.	GA	G	11291.91	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=8.673;DP=725;FS=6.883;HRun=7;HaplotypeScore=83.4681;InbreedingCoeff=0.9987;MQ=80.59;MQ0=0;MQRankSum=-3.106;QD=27.47;ReadPosRankSum=-0.280;VQSLOD=5.1490;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,129,1600	0/0:9,0:9:27.09:0,27,340	0/0:24,0:23:41.68:0,42,466	0/0:21,0:20:37.94:0,38,564	0/0:33,0:33:99:0,99,1234	1/1:3,40:43:99:1194,117,0	1/1:3,20:23:60.13:612,60,0	1/1:4,32:36:96.21:978,96,0	0/0:20,0:20:57.18:0,57,717	0/0:27,0:27:66.20:0,66,818	0/0:37,0:37:96.28:0,96,1176	1/1:1,25:26:69.15:704,69,0	0/0:31,0:31:90.25:0,90,1113	1/1:0,21:21:60.14:612,60,0	1/1:1,25:26:70.04:706,70,0	1/1:1,34:35:93.21:949,93,0	1/1:1,21:22:63.14:642,63,0	1/1:0,18:18:45.10:459,45,0	1/1:0,23:23:69.15:703,69,0	1/1:1,32:33:87.19:888,87,0	1/1:0,22:22:63.14:643,63,0	1/1:0,17:17:51.12:520,51,0	1/1:2,24:26:63.14:643,63,0	1/1:3,23:26:60.13:612,60,0	1/1:0,14:14:42.10:428,42,0	0/0:28,0:28:75.23:0,75,932	0/0:32,0:32:84.25:0,84,1032	0/0:6,0:6:18.06:0,18,225
chr10	19147265	.	T	TCC	16359.26	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=3.015;DP=658;FS=14.303;HRun=6;HaplotypeScore=137.1817;InbreedingCoeff=0.9897;MQ=79.39;MQ0=3;MQRankSum=-7.681;QD=26.30;ReadPosRankSum=3.506;VQSLOD=3.0792;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,0:44:97.19:341,97,0	1/1:1,0:9:17.47:62,17,0	0/0:16,0:16:36.07:0,36,437	0/0:20,0:20:28.65:0,29,382	1/1:5,0:33:59.76:210,60,0	1/1:3,19:24:57.15:933,57,0	1/1:3,18:22:57.20:963,57,0	1/1:8,23:32:81.22:1302,81,0	1/1:2,0:22:50.19:182,50,0	1/1:4,0:27:53.27:205,53,0	1/1:4,0:27:54.62:191,55,0	1/1:3,25:27:78.21:1276,78,0	1/1:3,0:30:59.21:207,59,0	1/1:6,21:27:60.03:887,60,0	1/1:2,23:25:66.18:1085,66,0	1/1:1,18:19:48.16:812,48,0	1/1:5,17:23:45.15:761,45,0	1/1:1,14:15:42.12:682,42,0	1/1:1,11:12:33.11:551,33,0	1/1:6,23:29:66.13:1052,66,0	1/1:6,25:30:57.20:964,57,0	1/1:3,21:24:66.18:1084,66,0	1/1:1,12:13:36.12:609,36,0	1/1:6,16:21:42.14:710,42,0	1/1:4,18:23:51.17:862,51,0	1/1:1,0:27:62.87:232,63,0	1/1:2,0:24:37.41:136,37,0	1/1:2,0:10:17.34:61,17,0
chr10	19147494	.	T	TGTTGAGGGAGG	71118.65	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=0.444;DP=635;FS=1.859;HRun=0;HaplotypeScore=244.1457;InbreedingCoeff=0.9868;MQ=71.58;MQ0=0;MQRankSum=-11.431;QD=121.99;ReadPosRankSum=4.616;VQSLOD=5.2637;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:22,17:40:87.21:4251,87,0	1/1:3,4:9:18.02:761,18,0	0/0:33,0:33:93.28:0,93,2957	0/0:19,0:19:51.17:0,51,1666	1/1:12,13:29:57.19:2945,57,0	1/1:12,0:12:33.11:1680,33,0	1/1:28,0:28:72.25:3502,72,0	1/1:26,0:26:72.22:2982,72,0	1/1:15,11:26:78.23:3826,78,0	1/1:14,15:29:87.30:4499,87,0	1/1:7,7:14:27.09:1405,27,0	1/1:23,0:23:63.22:3039,63,0	1/1:7,15:28:63.22:3426,63,0	1/1:26,0:26:72.25:3615,72,0	1/1:25,0:25:69.24:3421,69,0	1/1:20,2:22:57.20:2861,57,0	1/1:15,0:15:33.11:1543,33,0	1/1:14,0:14:36.12:1805,36,0	1/1:12,0:12:36.10:1521,36,0	1/1:26,0:26:69.24:3223,69,0	1/1:28,0:28:63.22:2888,63,0	1/1:21,0:21:54.18:2669,54,0	1/1:20,0:20:42.14:2043,42,0	1/1:16,0:16:36.05:1520,36,0	1/1:17,0:17:39.13:1882,39,0	1/1:16,19:41:99:5357,111,0	1/1:17,14:29:78.27:3850,78,0	1/1:4,1:5:15.05:602,15,0
chr10	19147495	.	G	GTTGAGGGAGGT	81282.53	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-1.105;DP=723;FS=0.534;HRun=0;HaplotypeScore=276.2801;InbreedingCoeff=0.9851;MQ=67.60;MQ0=0;MQRankSum=-11.815;QD=121.14;ReadPosRankSum=4.157;VQSLOD=4.9694;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:40,0:40:81.28:3751,81,0	1/1:6,0:6:16.30:654,16,0	0/0:33,0:33:95.69:0,96,2997	0/0:19,0:19:51.17:0,51,1681	1/1:28,0:28:37.44:2612,37,0	1/1:8,8:18:48.16:2550,48,0	1/1:13,16:32:81.28:4361,81,0	1/1:36,8:47:99:5394,129,0	1/1:26,0:26:75.24:3341,75,0	1/1:29,0:29:87.30:3957,87,0	1/1:14,0:14:27.09:1269,27,0	1/1:11,16:28:72.25:3770,72,0	1/1:24,0:24:63.22:3054,63,0	1/1:13,17:33:90.31:4659,90,0	1/1:16,14:32:90.31:4554,90,0	1/1:15,13:30:78.27:4093,78,0	1/1:10,7:19:42.14:2148,42,0	1/1:6,7:15:36.12:2058,36,0	1/1:15,5:23:65.57:2819,66,0	1/1:16,13:32:84.20:3908,84,0	1/1:20,12:34:75.26:3676,75,0	1/1:14,14:28:63.22:3475,63,0	1/1:11,11:24:51.13:2537,51,0	1/1:10,6:19:36.12:1749,36,0	1/1:7,9:21:45.15:2413,45,0	1/1:35,0:35:99:4598,99,0	1/1:29,0:27:55.50:3337,55,0	1/1:5,0:5:15.05:545,15,0
chr10	19147777	.	GA	G	950.05	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.373;DP=637;FS=0.000;HRun=8;HaplotypeScore=59.3160;InbreedingCoeff=0.9955;MQ=72.47;MQ0=1;MQRankSum=0.939;QD=20.21;ReadPosRankSum=1.288;VQSLOD=3.3929;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,23:24:57.08:550,57,0	0/0:11,0:11:33.10:0,33,399	0/0:19,0:19:39.06:0,39,443	0/0:10,0:11:23.80:0,24,250	0/0:39,0:39:96.24:0,96,1124	0/0:22,0:22:63.19:0,63,761	0/0:19,0:19:51.16:0,51,616	0/0:31,0:31:78.24:0,78,942	1/1:1,22:23:54.09:521,54,0	0/0:24,0:24:66.18:0,66,778	0/0:17,0:17:51.16:0,51,616	0/0:22,0:22:60.17:0,60,715	0/0:30,0:30:75.21:0,75,894	0/0:28,0:28:84.26:0,84,1014	0/0:29,0:29:78.22:0,78,920	0/0:17,1:18:25.05:0,25,566	0/0:19,0:19:51.14:0,51,604	0/0:17,0:17:51.13:0,51,602	0/0:19,0:19:51.15:0,51,606	0/0:37,0:37:99:0,108,1271	0/0:12,0:12:30.09:0,30,362	0/0:25,0:25:69.20:0,69,823	0/0:24,0:24:69.21:0,69,831	0/0:22,0:22:60.11:0,60,685	0/0:28,0:28:81.20:0,81,952	0/0:27,0:27:75.17:0,75,877	0/0:32,0:32:87.27:0,87,1046	0/0:7,0:7:21.06:0,21,252
chr10	19148044	.	CT	C	11847.94	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=14.074;DP=669;FS=0.615;HRun=3;HaplotypeScore=83.0882;InbreedingCoeff=0.9998;MQ=70.33;MQ0=3;MQRankSum=0.297;QD=32.73;ReadPosRankSum=2.823;VQSLOD=5.2567;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:55.86:0,56,1173	0/0:18,0:18:54.17:0,54,760	0/0:32,0:21:40.20:0,40,527	0/0:40,0:23:56.98:0,57,649	0/0:34,0:34:99:0,99,1360	1/1:1,31:32:81.25:1003,81,0	1/1:0,21:21:54.17:668,54,0	1/1:2,23:25:69.19:828,69,0	0/0:21,0:21:63.18:0,63,854	0/0:21,0:21:57.18:0,57,806	0/0:19,0:19:54.18:0,54,754	1/1:0,15:15:42.13:521,42,0	0/0:20,0:20:57.19:0,57,819	1/1:0,17:17:45.14:558,45,0	1/1:0,19:19:51.16:632,51,0	1/1:0,29:29:78.25:967,78,0	1/1:0,28:28:75.24:929,75,0	1/1:2,26:28:69.75:888,70,0	1/1:1,11:12:33.09:396,33,0	1/1:1,22:23:63.18:766,63,0	1/1:0,13:13:33.10:409,33,0	1/1:0,21:21:54.17:663,54,0	1/1:1,26:27:69.22:852,69,0	1/1:0,28:28:81.20:986,81,0	1/1:0,24:24:63.20:781,63,0	0/0:30,0:30:87.28:0,87,1219	0/0:30,0:30:90.28:0,90,1272	0/0:9,0:9:27.09:0,27,389
chr10	19148470	.	TTG	T	5288.72	PASS	AB=0.686;AC=50;AF=0.926;AN=54;BaseQRankSum=1.638;DP=683;FS=1.119;HRun=0;HaplotypeScore=130.4558;InbreedingCoeff=0.2461;MQ=59.69;MQ0=13;MQRankSum=1.375;QD=8.28;ReadPosRankSum=4.050;VQSLOD=4.6225;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:56:31:150,31,0	1/1:6,7:14:17.84:169,18,0	0/0:23,0:9:3.01:0,3,46	./.	1/1:11,19:29:13.93:383,14,0	0/1:10,12:22:24.62:181,0,25	1/1:8,12:20:15.04:167,15,0	1/1:25,0:35:13.01:70,13,0	1/1:6,0:11:8.42:41,8,0	1/1:16,10:26:22.85:289,23,0	1/1:11,10:21:26.90:257,27,0	1/1:12,15:29:35.72:360,36,0	1/1:15,14:30:22.79:392,23,0	1/1:10,15:27:23.65:236,24,0	1/1:8,14:22:21.06:234,21,0	1/1:11,0:21:24.46:143,24,0	1/1:20,0:29:7.20:109,7,0	1/1:15,0:28:25.52:124,26,0	1/1:11,0:18:22.26:106,22,0	1/1:12,0:30:33.29:160,33,0	0/1:18,1:29:14.20:19,0,14	1/1:15,9:23:18.01:188,18,0	1/1:6,7:13:8.98:87,9,0	1/1:15,3:19:6.90:242,7,0	1/1:11,6:18:22.69:241,23,0	1/1:9,8:16:30.04:307,30,0	1/1:12,16:29:41.73:417,42,0	1/1:1,13:15:20.89:216,21,0
chr10	19148919	.	GGATA	G	4685.37	PASS	AB=0.962;AC=21;AF=0.404;AN=52;BaseQRankSum=-1.283;DP=714;FS=4.944;HRun=0;HaplotypeScore=141.4206;InbreedingCoeff=0.8972;MQ=65.89;MQ0=2;MQRankSum=0.836;QD=17.10;ReadPosRankSum=3.035;VQSLOD=4.4852;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:20,11:31:30.10:466,30,0	0/0:2,0:6:9.03:0,9,137	./.	./.	0/0:24,0:37:36.12:0,36,611	1/1:10,10:20:27.09:421,27,0	1/1:17,15:32:25.33:375,25,0	0/0:32,0:32:43.67:0,44,573	1/1:14,12:26:21.07:325,21,0	0/1:7,1:25:29.99:30,0,741	0/0:19,0:23:12.04:0,12,202	1/1:5,11:16:30.10:468,30,0	0/0:8,0:19:15.05:0,15,261	1/1:13,10:24:27.08:400,27,0	1/1:8,21:29:48.16:749,48,0	0/0:25,0:25:36.12:0,36,843	0/0:33,0:33:43.96:0,44,963	0/0:17,0:17:21.07:0,21,470	0/0:20,0:34:40.84:0,41,690	0/0:14,0:34:32.82:0,33,603	0/0:10,0:24:33.11:0,33,555	1/1:10,10:20:24.08:373,24,0	1/1:10,18:28:45.62:703,46,0	1/1:10,13:23:24.08:375,24,0	0/0:34,0:34:66.23:0,66,1493	0/0:16,0:28:39.13:0,39,670	0/0:11,0:39:45.15:0,45,776	0/0:6,0:19:12.04:0,12,210
chr10	19149556	.	G	GT	1407.27	PASS	AB=0.973;AC=24;AF=0.429;AN=56;BaseQRankSum=-6.954;DP=561;FS=4.194;HRun=14;HaplotypeScore=141.9148;InbreedingCoeff=0.5791;MQ=69.37;MQ0=1;MQRankSum=0.689;QD=5.03;ReadPosRankSum=-7.129;VQSLOD=-0.4069;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:42.47:0,42,120	0/0:8,0:8:10.17:0,10,29	0/1:28,0:20:21.35:31,0,21	0/0:12,0:10:5.78:0,6,36	0/0:27,0:27:10.95:0,11,33	1/1:12,2:14:3.18:100,3,0	1/1:21,6:28:7.52:248,8,0	1/1:23,1:24:6.33:120,6,0	0/0:14,0:14:14.23:0,14,40	0/0:37,0:37:33.95:0,34,102	0/0:21,0:21:11.23:0,11,33	0/1:23,2:25:2.61:121,0,3	0/0:26,0:26:36.61:0,37,103	1/1:11,1:12:1.37:60,1,0	1/1:20,4:24:33.21:262,33,0	0/0:14,0:14:26.25:0,26,74	0/0:21,0:21:18.26:0,18,52	0/0:19,0:19:20.32:0,20,57	1/1:23,0:23:9.41:116,9,0	0/1:18,0:18:12.99:76,0,13	0/1:10,0:10:7.97:32,0,8	1/1:16,3:18:25.09:157,25,0	1/1:10,3:22:7.23:45,7,0	1/1:5,3:8:6:53,6,0	1/1:21,3:24:13.94:179,14,0	0/0:18,0:18:21.88:0,22,63	0/0:15,0:16:22.04:0,22,63	0/0:4,0:4:6.11:0,6,17
chr10	19149567	.	TTTTAG	T	6373.40	PASS	AB=0.994;AC=31;AF=0.554;AN=56;BaseQRankSum=-5.833;DP=533;FS=30.201;HRun=0;HaplotypeScore=146.2378;InbreedingCoeff=0.0130;MQ=66.33;MQ0=1;MQRankSum=-1.359;QD=14.69;ReadPosRankSum=7.060;VQSLOD=2.6642;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,35:38:63.06:1215,63,0	1/1:9,0:9:17.89:146,18,0	0/0:23,0:16:47.67:0,48,670	0/0:10,0:9:18.06:0,18,294	0/1:24,1:25:70.55:284,0,71	0/1:14,0:14:1.11:1,0,379	0/1:31,0:31:84.23:84,0,713	0/1:26,0:26:99:146,0,519	1/1:0,11:11:21.05:417,21,0	0/1:30,0:30:8.96:524,0,9	0/1:17,0:17:3.02:191,0,3	0/1:25,0:25:97.33:97,0,760	0/1:30,2:32:2.28:412,0,2	0/1:11,0:11:7.34:7,0,381	0/0:23,0:23:66.63:0,67,835	1/1:0,14:14:39.13:773,39,0	1/1:1,15:16:12.25:518,12,0	1/1:0,16:16:30.10:596,30,0	0/1:21,0:21:99:145,0,494	0/1:19,0:19:45.54:46,0,602	0/1:9,0:9:15.58:16,0,245	0/0:17,0:16:9.32:0,9,490	0/0:24,0:24:28.12:0,28,545	0/1:9,0:9:98.98:99,0,175	0/1:22,0:22:57.52:58,0,674	1/1:15,0:15:21.27:294,21,0	0/1:21,0:21:4.28:237,0,4	1/1:3,0:3:8.95:67,9,0
chr10	19149568	.	TTTAG	T	7880.47	PASS	AB=1.000;AC=38;AF=0.679;AN=56;BaseQRankSum=-7.267;DP=529;FS=36.820;HRun=0;HaplotypeScore=132.5000;InbreedingCoeff=0.0155;MQ=65.72;MQ0=1;MQRankSum=-0.255;QD=16.66;ReadPosRankSum=6.900;VQSLOD=2.4636;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:37,0:37:63.13:763,63,0	1/1:0,9:9:18.04:299,18,0	0/0:21,0:14:38.46:0,38,524	0/0:11,0:9:18.06:0,18,262	1/1:3,21:24:38.68:543,39,0	0/1:15,0:15:47.43:47,0,196	0/1:31,0:31:99:130,0,363	0/1:27,0:27:99:170,0,276	1/1:11,0:11:21.05:255,21,0	1/1:5,25:30:75.05:1123,75,0	1/1:2,13:15:32.91:452,33,0	0/1:25,0:25:99:105,0,442	1/1:4,26:30:54.10:916,54,0	0/1:11,0:11:7.77:8,0,236	0/0:24,0:24:13.30:0,13,453	1/1:14,0:14:39.12:479,39,0	1/1:16,0:16:12.29:310,12,0	1/1:16,0:16:30.09:369,30,0	0/1:21,0:21:99:156,0,282	0/1:19,0:19:74.86:75,0,364	0/1:9,0:9:23.95:24,0,132	0/1:18,0:17:55.24:55,0,264	0/1:25,0:25:33.94:34,0,297	0/1:9,0:9:99:102,0,101	0/1:22,0:22:66.98:67,0,395	1/1:0,15:15:41.99:648,42,0	1/1:2,19:21:15.85:591,16,0	1/1:0,3:3:9.03:158,9,0
chr10	19149569	.	TTAG	T	6929.60	PASS	AB=0.997;AC=39;AF=0.696;AN=56;BaseQRankSum=-1.893;DP=527;FS=97.524;HRun=0;HaplotypeScore=127.7055;InbreedingCoeff=-0.1091;MQ=66.65;MQ0=1;MQRankSum=2.122;QD=14.03;ReadPosRankSum=9.146;VQSLOD=0.4803;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:37,0:37:63.10:639,63,0	1/1:9,0:9:18.03:189,18,0	0/0:21,0:15:36.79:0,37,442	0/0:9,0:9:18.04:0,18,252	1/1:22,1:23:38.98:463,39,0	0/1:15,0:15:54.14:94,0,54	0/1:33,0:33:98.72:359,0,99	0/1:26,0:26:67.93:266,0,68	1/1:11,0:11:21.04:213,21,0	1/1:27,2:29:76.82:823,77,0	1/1:13,2:15:33.05:372,33,0	0/1:25,0:25:99:153,0,169	1/1:28,0:28:54.12:554,54,0	0/1:12,0:12:59.12:59,0,78	0/1:23,1:24:48.58:49,0,163	1/1:14,0:14:39.08:396,39,0	1/1:16,0:16:12.32:257,12,0	1/1:16,0:16:30.06:305,30,0	0/1:22,0:22:97.04:247,0,97	0/1:18,0:18:83.90:84,0,160	0/1:9,0:9:34.55:59,0,35	0/1:18,0:17:99:121,0,102	0/1:25,0:25:81.90:82,0,104	0/1:9,0:9:39.10:123,0,39	0/1:22,0:22:99:111,0,151	1/1:15,0:15:41.97:441,42,0	1/1:20,0:20:35.85:378,36,0	1/1:3,0:3:9.02:93,9,0
chr10	19149570	.	TAG	T	8137.11	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-2.302;DP=477;FS=0.860;HRun=0;HaplotypeScore=110.0784;InbreedingCoeff=0.8831;MQ=70.21;MQ0=0;MQRankSum=-3.711;QD=18.24;ReadPosRankSum=3.349;VQSLOD=4.9144;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:37,0:37:62.89:513,63,0	1/1:9,0:9:17.99:160,18,0	0/0:21,0:15:32.11:0,32,431	0/0:10,0:8:18.06:0,18,264	1/1:23,0:23:39.05:414,39,0	1/1:14,0:14:35.53:295,36,0	1/1:30,0:31:67.35:670,67,0	1/1:22,0:23:49.91:517,50,0	1/1:11,0:11:20.97:172,21,0	1/1:29,0:29:76.59:698,77,0	1/1:15,0:15:33.02:323,33,0	1/1:18,0:19:36.25:355,36,0	1/1:28,0:28:53.94:448,54,0	1/1:8,0:8:19.23:143,19,0	1/1:20,1:21:26.71:250,27,0	1/1:14,0:14:38.93:320,39,0	1/1:16,0:16:12.28:203,12,0	1/1:16,0:16:29.95:247,30,0	1/1:18,0:19:38.76:437,39,0	1/1:14,0:14:6.21:189,6,0	1/1:8,0:8:17.71:188,18,0	1/1:13,1:14:23.25:245,23,0	1/1:16,0:16:20.40:174,20,0	1/1:6,0:6:15.03:174,15,0	1/1:15,2:17:32.45:253,32,0	1/1:15,0:15:41.83:364,42,0	1/1:20,0:20:35.72:310,36,0	1/1:3,0:3:8.99:75,9,0
chr10	19151612	.	CTA	C	1968.88	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.392;DP=597;FS=6.639;HRun=0;HaplotypeScore=69.2120;InbreedingCoeff=0.9392;MQ=89.07;MQ0=1;MQRankSum=-4.875;QD=32.81;ReadPosRankSum=1.958;VQSLOD=5.8671;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:78.25:0,78,1444	0/0:7,0:7:21.05:0,21,367	0/0:24,0:24:72.25:0,72,1355	0/0:27,0:27:68.81:0,69,1162	0/0:17,0:17:51.16:0,51,950	0/0:33,0:33:93.28:0,93,1727	0/0:18,0:18:54.19:0,54,1042	0/0:36,0:36:99:0,105,1917	0/0:16,0:16:45.11:0,45,790	0/0:27,0:27:81.27:0,81,1529	0/0:13,0:13:39.12:0,39,718	0/0:24,0:24:69.22:0,69,1289	0/0:21,0:21:63.20:0,63,1168	0/0:35,0:35:99:0,105,1885	0/0:19,0:19:54.17:0,54,1009	1/1:0,22:21:54.18:826,54,0	1/1:0,17:17:36.12:551,36,0	1/1:0,21:21:48.16:734,48,0	0/0:19,0:19:57.18:0,57,1039	0/0:18,0:18:54.19:0,54,1037	0/0:24,0:24:66.23:0,66,1254	0/0:13,0:13:38.85:0,39,673	0/0:18,0:18:54.15:0,54,959	0/0:16,0:16:48.16:0,48,926	0/0:18,0:18:51.17:0,51,985	0/0:31,0:30:90.29:0,90,1676	0/0:33,0:33:93.30:0,93,1761	0/0:1,0:1:3.01:0,3,58
chr10	19152589	.	AGC	A	2178.21	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=11.393;DP=616;FS=2.384;HRun=0;HaplotypeScore=89.6655;InbreedingCoeff=0.9967;MQ=70.31;MQ0=3;MQRankSum=-8.384;QD=36.92;ReadPosRankSum=2.316;VQSLOD=6.0757;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:81.24:0,81,1458	0/0:7,0:7:21.07:0,21,389	0/0:38,0:28:78.19:0,78,1308	0/0:35,0:27:49.44:0,49,1236	0/0:15,0:15:45.14:0,45,802	0/0:30,0:30:84.27:0,84,1583	0/0:24,0:24:72.19:0,72,1263	0/0:31,0:31:84.24:0,84,1497	0/0:27,0:27:81.28:0,81,1545	0/0:17,0:17:51.16:0,51,942	0/0:12,0:12:33.10:0,33,603	0/0:24,0:24:72.25:0,72,1373	0/0:27,0:27:75.26:0,75,1397	0/0:27,0:27:81.28:0,81,1563	0/0:23,0:23:69.24:0,69,1306	1/1:0,21:21:63.21:876,63,0	1/1:2,17:19:51.11:687,51,0	1/1:2,17:19:54.18:758,54,0	0/0:27,0:26:72.23:0,72,1317	0/0:17,0:17:42.11:0,42,742	0/0:32,0:32:96.27:0,96,1740	0/0:7,0:7:21.07:0,21,401	0/0:16,0:16:45.15:0,45,857	0/0:29,0:29:87.28:0,87,1626	0/0:13,0:13:33.08:0,33,600	0/0:16,0:16:48.16:0,48,897	0/0:26,0:26:75.26:0,75,1414	0/0:10,0:10:30.10:0,30,579
chr10	19152627	.	C	CTCTT	4436.62	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=4.473;DP=709;FS=2.351;HRun=0;HaplotypeScore=154.6293;InbreedingCoeff=0.9991;MQ=71.27;MQ0=1;MQRankSum=-9.815;QD=64.30;ReadPosRankSum=3.831;VQSLOD=6.7212;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,99,1834	0/0:8,0:8:24.08:0,24,447	0/0:26,0:25:66.20:0,66,1129	0/0:29,0:26:75.24:0,75,1274	0/0:29,0:29:84.26:0,84,1503	0/0:28,0:28:72.20:0,72,1218	0/0:20,0:20:54.14:0,54,912	0/0:44,0:44:99:0,111,1921	0/0:28,0:28:75.26:0,75,1382	0/0:20,0:20:60.17:0,60,1053	0/0:20,0:20:60.19:0,60,1075	0/0:28,0:28:81.26:0,81,1478	0/0:25,0:25:66.21:0,66,1188	0/0:34,0:34:99:0,102,1872	0/0:30,0:30:84.27:0,84,1536	1/1:5,22:28:75.24:1908,75,0	1/1:5,17:23:54.14:1367,54,0	1/1:3,14:18:48.10:1162,48,0	0/0:22,0:22:63.14:0,63,1068	0/0:17,0:17:51.16:0,51,890	0/0:35,0:35:99:0,99,1770	0/0:14,0:14:39.12:0,39,694	0/0:22,0:22:63.22:0,63,1157	0/0:28,0:28:78.18:0,78,1323	0/0:27,0:27:72.23:0,72,1312	0/0:29,0:29:84.28:0,84,1536	0/0:32,0:32:93.27:0,93,1634	0/0:11,0:11:30.10:0,30,482
chr10	19152933	.	A	AC	11930.57	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=20.440;DP=631;FS=0.000;HRun=3;HaplotypeScore=116.7240;InbreedingCoeff=0.9977;MQ=81.08;MQ0=0;MQRankSum=-6.295;QD=39.90;ReadPosRankSum=-0.539;VQSLOD=3.8347;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:96.28:0,96,1305	0/0:5,0:5:15.05:0,15,210	0/0:21,0:21:48.19:0,48,757	0/0:18,0:18:43.75:0,44,573	0/0:29,0:29:84.26:0,84,1151	1/1:1,28:29:84.28:1195,84,0	1/1:0,31:31:90.30:1283,90,0	1/1:0,33:33:99:1348,99,0	0/0:21,0:21:60.17:0,60,803	0/0:20,0:20:60.19:0,60,818	0/0:18,0:18:54.18:0,54,755	1/1:0,17:17:45.15:643,45,0	0/0:19,0:19:57.19:0,57,797	1/1:0,22:22:66.22:931,66,0	1/1:1,19:20:57.19:810,57,0	0/0:27,0:27:81.27:0,81,1133	0/0:32,0:32:87.24:0,87,1173	0/0:24,0:24:66.20:0,66,894	1/1:0,17:17:51.17:722,51,0	1/1:0,24:24:69.23:971,69,0	1/1:1,17:18:51.17:727,51,0	1/1:1,28:29:78.26:1108,78,0	1/1:0,19:19:51:732,51,0	1/1:0,19:19:45.15:643,45,0	1/1:0,21:21:57.19:819,57,0	0/0:24,0:24:72.20:0,72,945	0/0:30,0:30:90.27:0,90,1207	0/0:10,0:10:30.10:0,30,419
chr10	19154614	.	AAGG	A	1753.20	PASS	AB=0.971;AC=31;AF=0.596;AN=52;BaseQRankSum=-9.027;DP=533;FS=0.000;HRun=0;HaplotypeScore=89.3678;InbreedingCoeff=0.1353;MQ=37.16;MQ0=79;MQRankSum=-6.176;QD=4.31;ReadPosRankSum=2.637;VQSLOD=1.4433;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:17,0:15:41.90:46,0,42	0/1:15,0:14:7.98:81,0,8	./.	./.	1/1:14,0:10:18.22:121,18,0	0/0:18,0:18:21.80:0,22,224	0/1:18,0:16:12.11:12,0,66	1/1:29,0:23:31.36:78,31,0	0/1:19,0:18:16.88:17,0,129	1/1:22,0:20:37.78:159,38,0	1/1:15,0:15:18.43:92,18,0	0/0:21,0:20:28.12:0,28,273	0/1:25,0:17:64.23:117,0,64	0/1:20,0:18:9.70:10,0,135	0/0:25,0:25:11.79:0,12,259	1/1:21,0:18:15.49:167,15,0	0/1:18,0:13:14.85:67,0,15	0/1:12,0:8:4.06:82,0,4	1/1:19,0:13:15.68:75,16,0	1/1:21,0:19:40.80:264,41,0	0/1:13,0:13:33.69:51,0,34	0/1:24,4:23:2.81:3,0,183	0/0:21,0:18:2.85:0,3,98	0/0:41,0:30:6.16:0,6,297	0/1:13,4:16:87.43:87,0,89	1/1:26,0:19:25.81:161,26,0	1/1:22,0:20:27.55:115,28,0	1/1:15,1:6:15.53:123,16,0
chr10	19154617	.	GAGA	G	447.65	PASS	AB=0.957;AC=16;AF=0.333;AN=48;BaseQRankSum=1.029;DP=545;FS=5.373;HRun=0;HaplotypeScore=98.3169;InbreedingCoeff=-0.0082;MQ=37.69;MQ0=77;MQRankSum=0.557;QD=1.70;ReadPosRankSum=1.055;VQSLOD=1.5700;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:19,0:17:9.98:10,0,38	1/1:15,0:14:11.97:130,12,0	./.	./.	0/0:14,0:10:3:0,3,27	1/1:20,0:19:3.01:34,3,0	./.	./.	0/0:20,0:19:11.94:0,12,112	0/1:18,6:22:9.77:118,0,10	1/1:8,6:14:2.45:36,2,0	0/0:22,0:21:2.84:0,3,14	0/0:23,0:15:6.67:0,7,23	0/1:19,1:18:28.07:28,0,84	0/0:23,0:23:4.41:0,4,15	0/1:22,0:19:9.87:29,0,10	0/0:18,0:13:4.59:0,5,16	0/0:12,0:8:2.68:0,3,11	0/0:19,0:14:5.99:0,6,51	0/0:22,0:20:7.03:0,7,31	0/0:14,0:14:5.99:0,6,64	0/0:26,0:22:14.64:0,15,112	0/0:18,3:18:0.89:0,1,2	0/1:39,3:32:55.69:56,0,141	0/1:18,0:17:19.86:50,0,20	0/1:27,1:21:30.05:40,0,30	1/1:18,6:22:2.94:37,3,0	0/1:17,0:7:18.34:18,0,20
chr10	19155721	.	A	AACCCCAGACAC	76937.92	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-8.119;DP=720;FS=0.000;HRun=0;HaplotypeScore=189.7326;InbreedingCoeff=0.9907;MQ=58.52;MQ0=0;MQRankSum=-12.310;QD=116.57;ReadPosRankSum=5.442;VQSLOD=4.6807;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:18,17:38:72.25:3849,72,0	1/1:4,6:11:33.03:1379,33,0	0/0:31,0:31:90.20:0,90,2563	0/0:29,0:29:81.28:0,81,2766	1/1:9,17:29:45.15:2376,45,0	1/1:4,8:12:33.11:1854,33,0	1/1:14,9:26:69.24:3512,69,0	1/1:14,8:24:57.17:2434,57,0	1/1:12,21:37:93.28:4265,93,0	1/1:15,16:33:93.32:4652,93,0	1/1:12,10:24:36.12:1645,36,0	1/1:12,20:35:93.32:4273,93,0	1/1:8,17:28:66.23:3294,66,0	1/1:16,15:35:90.31:4286,90,0	1/1:9,23:34:78.27:4225,78,0	1/1:9,16:28:72.25:3568,72,0	1/1:8,9:20:45.15:2363,45,0	1/1:11,11:24:63.17:3107,63,0	1/1:5,5:10:30.10:1341,30,0	1/1:9,15:26:54.18:2841,54,0	1/1:10,8:20:33.11:1721,33,0	1/1:10,15:27:66.23:3499,66,0	1/1:4,11:16:30.10:1724,30,0	1/1:6,9:17:30.53:1570,31,0	1/1:14,12:30:66.23:3391,66,0	1/1:11,18:32:90.31:4499,90,0	1/1:9,18:28:81.28:4407,81,0	1/1:1,5:8:15.05:864,15,0
chr10	19156273	.	CTT	C	1892.02	PASS	AB=0.720;AC=28;AF=0.500;AN=56;BaseQRankSum=1.229;DP=633;FS=1.353;HRun=18;HaplotypeScore=84.6617;InbreedingCoeff=0.6378;MQ=60.15;MQ0=12;MQRankSum=4.352;QD=5.34;ReadPosRankSum=6.588;VQSLOD=-0.6773;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:45:97.95:0,98,1018	0/0:6,0:12:4.69:0,5,160	0/1:32,1:12:5.60:6,0,30	0/0:31,0:9:8.75:0,9,59	0/0:28,0:31:52.45:0,52,562	0/1:5,1:17:4.55:5,0,62	1/1:7,20:34:5.92:280,6,0	1/1:12,8:23:5.09:98,5,0	0/0:14,0:27:36.66:0,37,347	0/0:25,0:28:51.32:0,51,498	0/0:8,0:15:24.90:0,25,253	0/1:5,9:16:1.55:62,0,2	0/0:26,0:26:50.55:0,51,476	1/1:13,5:20:37.32:235,37,0	0/1:12,9:25:2.57:166,0,3	1/1:5,0:16:24.41:105,24,0	1/1:9,2:25:35.23:157,35,0	1/1:1,0:9:13.64:59,14,0	1/1:14,9:23:7.38:183,7,0	1/1:16,5:24:29.46:191,29,0	0/1:8,0:10:1.65:17,0,2	0/1:11,6:19:2.13:127,0,2	1/1:4,8:13:13.83:89,14,0	1/1:8,16:25:13.08:132,13,0	1/1:8,7:18:26.74:179,27,0	0/0:16,0:24:52.54:0,53,443	0/0:13,0:21:30.21:0,30,296	0/0:11,0:13:33.04:0,33,350
chr10	19158093	.	A	ACCAGTGG	7879.36	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=6.181;DP=823;FS=3.494;HRun=0;HaplotypeScore=185.0198;InbreedingCoeff=0.9970;MQ=91.24;MQ0=0;MQRankSum=-13.563;QD=98.49;ReadPosRankSum=1.649;VQSLOD=5.6226;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:60,0:60:99:0,178,4382	0/0:12,0:12:36.12:0,36,903	0/0:38,0:38:99:0,99,2436	0/0:31,0:31:78.21:0,78,1853	0/0:24,0:24:69.24:0,69,1783	0/0:30,0:30:81.28:0,81,2076	0/0:23,0:23:66.23:0,66,1649	0/0:30,0:30:87.29:0,87,2147	0/0:26,0:26:69.24:0,69,1710	0/0:41,0:41:99:0,120,3062	0/0:17,0:17:42.14:0,42,1089	0/0:32,0:32:93.32:0,93,2352	0/0:33,0:33:99:0,99,2352	0/0:41,0:41:99:0,123,3132	0/0:45,0:45:99:0,135,3507	1/1:9,32:43:99:4484,117,0	1/1:4,15:21:48.64:1878,49,0	1/1:6,8:16:39.13:1517,39,0	0/0:21,0:21:60.21:0,60,1532	0/0:14,0:14:39.12:0,39,950	0/0:46,0:46:99:0,126,3054	0/0:25,0:25:69.24:0,69,1763	0/0:25,0:25:72.25:0,72,1853	0/0:30,0:30:87.30:0,87,2198	0/0:29,0:29:81.28:0,81,2103	0/0:35,0:35:99:0,102,2649	0/0:28,0:28:81.28:0,81,2097	0/0:7,0:7:18.06:0,18,459
chr10	19158833	.	GA	G	16621.05	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-7.542;DP=809;FS=18.459;HRun=7;HaplotypeScore=106.4003;InbreedingCoeff=0.9289;MQ=80.80;MQ0=2;MQRankSum=-3.034;QD=24.05;ReadPosRankSum=7.338;VQSLOD=3.2020;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,43:45:99:1079,102,0	1/1:1,7:8:15.03:153,15,0	0/0:55,0:43:52.02:0,52,828	0/0:61,0:48:38.65:0,39,803	1/1:3,22:25:53.83:497,54,0	1/1:4,31:35:78.18:794,78,0	1/1:4,20:24:48.10:488,48,0	1/1:6,24:30:72.04:684,72,0	1/1:13,24:37:99:1034,105,0	1/1:1,32:33:95.54:936,96,0	1/1:2,21:23:60.12:605,60,0	1/1:1,22:23:57.13:581,57,0	1/1:2,28:30:75.15:756,75,0	1/1:1,24:25:63.14:642,63,0	1/1:4,36:40:96.22:978,96,0	1/1:5,29:34:75.16:764,75,0	1/1:2,23:25:50.42:517,50,0	1/1:0,3:3:6.01:61,6,0	1/1:4,23:26:69.10:678,69,0	1/1:3,25:28:74.92:705,75,0	1/1:4,32:36:78:778,78,0	1/1:0,28:28:63.08:627,63,0	1/1:1,21:22:54.12:549,54,0	1/1:1,16:17:36.08:367,36,0	1/1:1,21:22:54.12:550,54,0	1/1:3,32:35:96.07:921,96,0	1/1:2,27:29:68.99:701,69,0	1/1:1,6:7:12.79:176,13,0
chr10	19158986	.	C	CAT	2902.74	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-9.017;DP=984;FS=2.333;HRun=0;HaplotypeScore=121.5390;InbreedingCoeff=0.9985;MQ=61.23;MQ0=3;MQRankSum=1.929;QD=38.70;ReadPosRankSum=1.632;VQSLOD=5.4439;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,28:30:75.26:1350,75,0	0/0:13,0:13:39.13:0,39,544	0/0:31,0:23:47.81:0,48,596	0/0:37,0:26:23.51:0,24,383	0/0:29,0:29:78.26:0,78,1092	0/0:26,0:26:75.24:0,75,1033	0/0:30,0:30:84.28:0,84,1175	0/0:50,0:50:99:0,135,1862	1/1:2,41:42:93.32:1674,93,0	0/0:44,0:44:99:0,126,1765	0/0:23,0:23:69.23:0,69,965	0/0:43,0:43:99:0,120,1627	0/0:40,0:40:99:0,117,1637	0/0:48,0:48:99:0,138,1896	0/0:52,0:52:99:0,150,2083	0/0:55,0:55:99:0,160,2226	0/0:19,0:19:54.18:0,54,755	0/0:17,0:17:51.17:0,51,714	0/0:28,0:28:66.19:0,66,888	0/0:27,0:27:78.26:0,78,1091	0/0:75,0:74:99:0,214,2962	0/0:39,0:39:99:0,108,1495	0/0:23,0:23:69.23:0,69,966	0/0:38,0:38:99:0,108,1473	0/0:28,0:28:78.26:0,78,1092	0/0:43,0:43:99:0,120,1681	0/0:40,0:40:99:0,120,1645	0/0:10,0:10:30.10:0,30,420
chr10	19160210	.	A	ATGG	5875.75	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=7.877;DP=793;FS=5.316;HRun=0;HaplotypeScore=129.8999;InbreedingCoeff=0.9991;MQ=87.53;MQ0=0;MQRankSum=-3.868;QD=57.61;ReadPosRankSum=2.572;VQSLOD=6.7780;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,108,1827	0/0:14,0:14:42.14:0,42,713	0/0:27,0:27:75.26:0,75,1266	0/0:28,0:28:75.22:0,75,1236	0/0:17,0:17:48.16:0,48,818	0/0:20,0:20:57.18:0,57,946	0/0:26,0:26:57.19:0,57,967	0/0:35,0:35:96.33:0,96,1635	0/0:30,0:30:84.29:0,84,1424	0/0:39,0:39:99:0,114,1943	0/0:21,0:21:57.19:0,57,972	0/0:41,0:41:99:0,123,2067	0/0:27,0:27:78.25:0,78,1291	0/0:39,0:39:99:0,108,1842	0/0:26,0:26:69.24:0,69,1173	1/1:1,37:40:99:2281,99,0	1/1:8,32:40:93.32:2143,93,0	1/1:1,21:22:63.22:1452,63,0	0/0:19,0:19:54.18:0,54,918	0/0:28,0:28:81.28:0,81,1379	0/0:47,0:47:99:0,132,2240	0/0:35,0:35:99:0,99,1680	0/0:23,0:23:66.23:0,66,1123	0/0:20,0:20:57.19:0,57,971	0/0:29,0:29:81.26:0,81,1352	0/0:34,0:34:99:0,102,1714	0/0:18,0:18:48.16:0,48,819	0/0:8,0:8:23.45:0,23,295
chr10	19162586	.	A	ACTGT	50245.97	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-9.944;DP=805;FS=4.337;HRun=0;HaplotypeScore=112.6554;InbreedingCoeff=0.9999;MQ=83.45;MQ0=0;MQRankSum=-11.671;QD=67.26;ReadPosRankSum=6.893;VQSLOD=7.0656;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,43:48:99:3132,117,0	1/1:3,14:17:42.14:1118,42,0	0/0:35,0:35:90.14:0,90,1602	0/0:23,0:23:54.96:0,55,972	1/1:4,22:27:66.23:1752,66,0	1/1:2,20:23:63.22:1691,63,0	1/1:7,33:40:99:2782,105,0	1/1:11,16:28:75.23:1878,75,0	1/1:2,22:26:66.23:1737,66,0	1/1:5,31:37:99:2698,105,0	1/1:5,19:24:42.14:1124,42,0	1/1:3,29:32:81.28:2180,81,0	1/1:3,17:20:54.08:1441,54,0	1/1:5,32:37:99:2736,102,0	1/1:4,37:42:99:2978,111,0	1/1:4,34:38:99:2663,99,0	1/1:5,25:30:69.24:1861,69,0	1/1:6,18:24:57.20:1509,57,0	1/1:2,16:18:51.18:1345,51,0	1/1:5,34:40:96.33:2546,96,0	1/1:2,27:29:69.24:1854,69,0	1/1:3,22:27:57.20:1529,57,0	1/1:1,24:25:56.93:1536,57,0	1/1:2,17:20:42.14:1133,42,0	1/1:1,22:23:66.23:1781,66,0	1/1:2,22:25:75.26:1936,75,0	1/1:2,28:31:84.25:2196,84,0	1/1:1,14:15:42.14:1109,42,0
chr10	19163347	.	G	GT	1834.98	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=10.654;DP=636;FS=5.497;HRun=0;HaplotypeScore=86.7801;InbreedingCoeff=0.9994;MQ=91.88;MQ0=0;MQRankSum=-10.179;QD=34.62;ReadPosRankSum=0.268;VQSLOD=2.9566;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,147,2054	0/0:11,0:11:33.11:0,33,461	0/0:24,0:24:66.21:0,66,906	0/0:31,0:31:88.85:0,89,1101	0/0:23,0:23:69.23:0,69,965	0/0:25,0:25:75.23:0,75,1028	0/0:44,0:44:99:0,132,1841	0/0:25,0:25:72.23:0,72,976	0/0:12,0:12:36.10:0,36,484	0/0:18,0:18:54.18:0,54,755	0/0:13,0:13:39.13:0,39,545	0/0:34,0:34:99:0,99,1365	0/0:21,0:21:60.20:0,60,839	0/0:21,0:21:63.21:0,63,881	0/0:25,0:25:75.25:0,75,1046	1/1:0,19:19:54.18:775,54,0	1/1:0,16:16:33.11:481,33,0	1/1:0,18:18:48.16:722,48,0	0/0:14,0:14:42.14:0,42,584	0/0:22,0:22:66.22:0,66,921	0/0:30,0:30:90.28:0,90,1240	0/0:15,0:15:42.14:0,42,587	0/0:18,0:18:48.16:0,48,670	0/0:31,0:31:93.29:0,93,1281	0/0:24,0:24:72.23:0,72,982	0/0:22,0:22:63.21:0,63,880	0/0:22,0:22:66.22:0,66,915	0/0:9,0:9:27.09:0,27,378
chr10	19163349	.	TGCCCG	T	2385.46	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=10.893;DP=638;FS=3.788;HRun=0;HaplotypeScore=136.7374;InbreedingCoeff=0.9991;MQ=92.79;MQ0=0;MQRankSum=-9.944;QD=47.71;ReadPosRankSum=-0.077;VQSLOD=3.8636;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,141,4198	0/0:12,0:12:36.12:0,36,1040	0/0:26,0:26:72.25:0,72,2282	0/0:30,0:31:90.31:0,90,2593	0/0:23,0:23:69.24:0,69,2164	0/0:25,0:25:75.24:0,75,2297	0/0:44,0:44:99:0,126,3893	0/0:24,0:24:69.24:0,69,2176	0/0:12,0:12:36.09:0,36,991	0/0:18,0:18:54.19:0,54,1695	0/0:13,0:13:39.13:0,39,1215	0/0:34,0:34:99:0,99,3103	0/0:21,0:21:63.20:0,63,1931	0/0:23,0:23:69.24:0,69,2116	0/0:26,0:26:78.27:0,78,2403	1/1:2,17:19:54.19:1105,54,0	1/1:2,11:13:28.04:532,28,0	1/1:4,14:18:43.09:891,43,0	0/0:12,0:12:33.10:0,33,950	0/0:22,0:22:66.23:0,66,2090	0/0:32,0:32:96.33:0,96,3057	0/0:17,0:17:51.18:0,51,1611	0/0:18,0:18:48.16:0,48,1454	0/0:30,0:30:90.31:0,90,2863	0/0:23,0:23:69.24:0,69,2201	0/0:21,0:21:63.22:0,63,1986	0/0:23,0:23:66.21:0,66,1955	0/0:9,0:9:27.09:0,27,872
chr10	19165126	.	TG	T	3435.41	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=11.515;DP=657;FS=0.818;HRun=5;HaplotypeScore=60.4126;InbreedingCoeff=0.9994;MQ=82.40;MQ0=0;MQRankSum=-2.281;QD=30.14;ReadPosRankSum=2.678;VQSLOD=4.2049;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,19:20:51.15:578,51,0	0/0:9,0:9:27.09:0,27,369	0/0:25,0:25:66.19:0,66,854	0/0:11,0:11:30.07:0,30,381	0/0:37,0:37:99:0,111,1484	0/0:31,0:31:90.28:0,90,1213	0/0:25,0:25:75.25:0,75,1026	0/0:33,0:33:90.28:0,90,1202	1/1:1,25:26:75.21:850,75,0	0/0:35,0:35:99:0,99,1352	0/0:26,0:26:72.24:0,72,976	0/0:17,0:17:48.15:0,48,638	0/0:31,0:31:90.30:0,90,1219	0/0:9,0:9:27.06:0,27,338	0/0:26,0:26:72.23:0,72,969	1/1:1,28:29:75.21:851,75,0	1/1:1,16:17:45.13:510,45,0	1/1:1,21:22:57.16:646,57,0	0/0:20,0:20:51.14:0,51,663	0/0:33,0:33:99:0,99,1336	0/0:17,0:17:51.17:0,51,698	0/0:29,0:29:81.27:0,81,1108	0/0:18,0:18:54.18:0,54,738	0/0:16,0:16:48.15:0,48,640	0/0:23,0:23:63.21:0,63,861	0/0:28,0:28:84.28:0,84,1147	0/0:31,0:31:90.30:0,90,1224	0/0:13,0:13:39.13:0,39,533
chr10	19166157	.	GTCTGTCTCTGTCTCTGTC	G	4879.73	PASS	AB=0.941;AC=30;AF=0.577;AN=52;BaseQRankSum=3.576;DP=623;FS=34.706;HRun=0;HaplotypeScore=270.3484;InbreedingCoeff=0.4618;MQ=65.28;MQ0=17;MQRankSum=1.160;QD=13.78;ReadPosRankSum=-0.097;VQSLOD=2.6765;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:36,0:35:24.08:548,24,0	1/1:10,0:10:12.04:299,12,0	./.	./.	1/1:23,0:22:24.38:258,24,0	0/0:25,0:25:11.07:0,11,92	0/0:29,0:27:9.45:0,9,73	0/0:32,0:30:17.87:0,18,139	1/1:19,0:19:21.02:514,21,0	1/1:14,9:21:26.57:505,27,0	0/1:5,6:11:0.32:0,0,0	0/1:20,0:20:9.54:10,0,39	1/1:22,0:22:36.09:778,36,0	0/1:28,0:27:23.26:23,0,53	0/1:25,0:25:12.32:12,0,75	1/1:18,0:18:2.12:7,2,0	0/1:27,0:25:7.57:36,0,8	1/1:21,0:21:8.08:48,8,0	0/0:14,0:12:18.69:0,19,144	0/0:18,0:18:2.63:0,3,18	0/0:45,0:44:30.83:0,31,256	0/0:22,0:22:5.99:0,6,49	1/1:11,0:10:5.87:36,6,0	0/0:25,0:25:5.34:0,5,97	0/1:17,0:17:23.66:24,0,36	1/1:9,10:18:27.09:683,27,0	1/1:19,0:18:36.12:911,36,0	1/1:5,0:5:12.01:188,12,0
chr10	19166195	.	CTG	C	2189.02	PASS	AB=0.964;AC=12;AF=0.231;AN=52;BaseQRankSum=1.618;DP=644;FS=42.567;HRun=0;HaplotypeScore=129.1580;InbreedingCoeff=-0.0297;MQ=42.93;MQ0=63;MQRankSum=4.756;QD=9.20;ReadPosRankSum=4.316;VQSLOD=1.5966;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:33,2:31:29.82:263,0,30	0/1:15,0:14:55.09:136,0,55	./.	./.	1/1:20,0:16:23.71:274,24,0	0/0:21,0:19:14.71:0,15,164	0/0:41,0:30:12:0,12,121	0/0:26,0:18:54:0,54,637	0/1:26,0:23:99:239,0,111	0/1:24,0:19:99:220,0,194	0/1:8,0:8:0:0,0,0	0/1:23,0:23:4.42:4,0,118	0/1:22,3:24:85.33:357,0,85	0/0:34,0:31:24.88:0,25,289	0/0:30,0:29:39.04:0,39,443	0/0:14,0:13:31.37:0,31,255	0/0:26,0:20:49.10:0,49,459	0/0:22,0:20:32.76:0,33,478	0/0:19,0:16:48.03:0,48,730	0/0:30,0:28:13.64:0,14,175	0/0:37,0:30:38.97:0,39,640	0/0:28,0:27:5.99:0,6,48	0/0:21,0:20:5.60:0,6,37	0/0:31,0:27:16.09:0,16,404	0/0:23,0:21:12:0,12,123	0/1:19,0:17:99:324,0,239	0/1:22,7:24:99:419,0,173	0/1:14,0:10:36.68:97,0,37
chr10	19166197	.	GTCTCTGTCTCTGTCTC	G	4798.79	PASS	AB=1.000;AC=41;AF=0.788;AN=52;BaseQRankSum=-0.566;DP=640;FS=45.771;HRun=0;HaplotypeScore=201.6098;InbreedingCoeff=-0.1649;MQ=42.75;MQ0=63;MQRankSum=4.299;QD=7.52;ReadPosRankSum=4.486;VQSLOD=2.2027;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:36,0:32:16.48:230,0,16	1/1:16,0:15:7.50:171,7,0	./.	./.	1/1:21,0:17:16.16:94,16,0	1/1:22,0:20:6.46:50,6,0	1/1:38,0:27:3:25,3,0	1/1:25,0:16:29.85:315,30,0	0/1:28,0:25:99:201,0,132	0/1:23,0:18:99:133,0,207	0/1:8,0:8:0.21:0,0,0	1/1:23,0:23:1.19:78,1,0	0/1:25,0:24:40.20:294,0,40	0/1:34,0:31:30.79:214,0,31	1/1:30,0:29:27.02:258,27,0	1/1:15,0:14:33.12:265,33,0	1/1:26,0:20:42.99:339,43,0	0/1:19,0:17:6.94:104,0,7	1/1:18,0:15:32.78:372,33,0	1/1:9,21:28:11.61:156,12,0	1/1:37,0:30:32.97:347,33,0	0/1:28,0:27:0:0,0,1	1/1:20,0:20:5.83:84,6,0	1/1:31,0:27:31.23:266,31,0	1/1:22,0:20:9.02:110,9,0	0/1:20,0:18:99:226,0,194	0/1:29,0:24:12.33:408,0,12	0/1:14,0:10:15.70:59,0,16
chr10	19166199	.	CTCTGTCTCTG	C	4821.15	PASS	AB=0.956;AC=42;AF=0.808;AN=52;BaseQRankSum=-0.525;DP=645;FS=26.283;HRun=0;HaplotypeScore=168.6351;InbreedingCoeff=-0.1295;MQ=42.73;MQ0=61;MQRankSum=3.713;QD=7.47;ReadPosRankSum=2.458;VQSLOD=2.0304;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:38,0:34:3.23:170,3,0	1/1:16,0:15:4.26:102,4,0	./.	./.	1/1:20,0:16:13.51:86,14,0	1/1:21,0:19:6.47:74,6,0	1/1:37,0:27:3:25,3,0	1/1:23,0:15:21.27:121,21,0	0/1:28,0:25:37.22:167,0,37	0/1:24,0:19:61.65:62,0,215	0/1:9,0:9:0.21:0,0,0	1/1:24,0:24:10.55:147,11,0	0/1:25,0:24:61.17:150,0,61	1/1:34,0:31:4.15:418,4,0	1/1:30,0:29:27.07:580,27,0	1/1:15,0:14:36.05:402,36,0	1/1:26,0:20:48.11:574,48,0	1/1:21,0:19:28.09:321,28,0	0/1:19,0:16:0.24:55,0,0	1/1:29,0:27:11.64:73,12,0	0/1:37,0:30:26.49:55,0,26	0/1:6,22:27:0:0,0,1	1/1:21,0:21:6.68:185,7,0	1/1:31,0:27:31.71:515,32,0	1/1:23,0:21:9.02:199,9,0	0/1:21,0:19:99:113,0,223	0/1:31,0:26:88.30:195,0,88	0/1:14,0:10:21.30:31,0,21
chr10	19166201	.	CTG	C	3035.45	PASS	AB=0.977;AC=28;AF=0.538;AN=52;BaseQRankSum=-0.199;DP=637;FS=46.782;HRun=0;HaplotypeScore=126.9916;InbreedingCoeff=-0.1401;MQ=42.32;MQ0=62;MQRankSum=7.046;QD=6.00;ReadPosRankSum=2.063;VQSLOD=1.1982;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:38,0:34:10:252,0,10	0/1:16,0:15:57.28:137,0,57	./.	./.	0/1:20,0:16:8.14:8,0,9	1/1:20,0:18:5.99:48,6,0	1/1:37,0:27:3:25,3,0	0/0:21,0:13:34.72:0,35,273	0/1:29,0:25:99:233,0,117	0/1:24,1:20:99:226,0,269	0/1:9,0:9:0:0,0,0	1/1:25,0:25:7.04:61,7,0	0/1:24,0:23:84.95:327,0,85	1/1:34,0:31:29.17:196,29,0	1/1:27,1:27:25.07:162,25,0	0/1:14,1:14:50.83:208,0,51	0/1:22,4:20:99:236,0,114	0/1:19,2:19:45.73:46,0,243	0/0:18,0:15:44.74:0,45,402	0/0:29,0:27:10.17:0,10,163	0/0:37,0:30:5.36:0,5,192	0/0:26,0:25:0:0,0,0	1/1:21,0:21:8.80:70,9,0	0/1:32,0:28:33.58:132,0,34	1/1:22,0:20:5.83:39,6,0	0/1:21,0:19:99:318,0,337	0/1:31,0:26:99:412,0,189	0/1:12,0:8:32.90:56,0,33
chr10	19166205	.	CTCTG	C	2035.04	PASS	AB=1.000;AC=30;AF=0.600;AN=50;BaseQRankSum=-1.734;DP=637;FS=1.149;HRun=0;HaplotypeScore=141.5776;InbreedingCoeff=0.4480;MQ=42.17;MQ0=61;MQRankSum=1.192;QD=4.72;ReadPosRankSum=-2.619;VQSLOD=2.3124;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:36,0:32:8.30:8,0,35	0/1:15,0:14:13.74:14,0,27	./.	./.	1/1:20,0:16:18.04:127,18,0	1/1:21,1:20:5.65:47,6,0	./.	1/1:20,0:12:6.37:19,6,0	0/1:29,0:25:10.44:10,0,65	0/0:26,0:21:29.15:0,29,375	0/1:9,0:9:0.11:0,0,0	1/1:23,2:25:5.89:31,6,0	0/0:24,0:23:21.78:0,22,134	0/1:35,0:32:2.05:133,0,2	1/1:27,0:26:23.68:179,24,0	1/1:15,0:14:30.01:345,30,0	1/1:28,0:22:51:598,51,0	1/1:22,0:20:28.29:327,28,0	0/1:19,0:17:12.07:12,0,94	1/1:30,0:28:12.41:75,12,0	0/0:34,0:27:17.80:0,18,201	0/0:26,0:25:0:0,0,0	1/1:23,0:23:6.56:59,7,0	1/1:33,0:29:1.86:157,2,0	1/1:23,0:21:6.01:61,6,0	0/0:21,0:19:36.61:0,37,326	0/0:29,0:24:14.13:0,14,167	0/0:11,0:7:7.72:0,8,51
chr10	19166207	.	CTG	C	1410.28	PASS	AB=0.996;AC=27;AF=0.540;AN=50;BaseQRankSum=1.701;DP=643;FS=0.000;HRun=0;HaplotypeScore=134.5310;InbreedingCoeff=0.4375;MQ=41.88;MQ0=62;MQRankSum=4.068;QD=3.43;ReadPosRankSum=-2.305;VQSLOD=2.4369;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:35,1:32:15.12:17,0,15	0/0:13,0:12:2.18:0,2,25	./.	./.	1/1:21,0:17:17.90:136,18,0	1/1:22,0:20:5.78:47,6,0	./.	0/0:20,0:12:4.83:0,5,46	0/1:30,0:26:17.45:33,0,17	0/1:27,0:21:3.95:4,0,427	0/1:10,0:10:0:0,0,0	1/1:25,0:25:4.92:36,5,0	0/1:24,0:23:5.47:5,0,103	1/1:34,0:31:29.29:201,29,0	1/1:26,0:25:24.87:149,25,0	1/1:13,1:13:27.23:217,27,0	1/1:24,4:22:43.77:317,44,0	1/1:20,1:19:19.72:115,20,0	0/0:20,0:18:42.25:0,42,245	0/0:31,0:29:13.92:0,14,106	0/0:33,0:26:26.72:0,27,217	0/0:27,0:26:0:0,0,0	1/1:23,0:23:8.82:73,9,0	0/1:35,0:31:5.11:184,0,5	1/1:24,0:22:5.87:40,6,0	0/0:23,0:20:35.90:0,36,385	0/0:30,0:25:8.72:0,9,139	0/1:11,0:7:0.31:0,0,36
chr10	19166213	.	C	CTG	1044.64	PASS	AB=0.908;AC=20;AF=0.385;AN=52;BaseQRankSum=-0.248;DP=643;FS=3.708;HRun=0;HaplotypeScore=132.5151;InbreedingCoeff=0.1867;MQ=41.28;MQ0=61;MQRankSum=2.601;QD=2.73;ReadPosRankSum=-0.682;VQSLOD=2.6405;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:36:17.23:0,17,162	0/1:13,1:13:22.94:23,0,87	./.	./.	0/0:22,0:18:14.67:0,15,118	0/0:7,12:20:3.46:0,3,25	1/1:37,0:27:2.99:24,3,0	0/0:17,0:13:15.79:0,16,151	0/0:26,0:22:22.93:0,23,269	0/0:29,0:23:52.50:0,52,584	0/1:12,0:12:0.11:0,0,0	0/1:7,18:26:7.89:50,0,8	0/0:24,0:23:24.20:0,24,246	0/1:10,17:27:88.14:88,0,96	1/1:25,0:24:24.03:334,24,0	0/0:15,0:14:0.78:0,1,76	0/1:24,0:18:7.10:7,0,82	0/1:20,0:18:16.75:54,0,17	0/1:22,0:20:24.47:24,0,203	0/1:31,0:29:2.85:148,0,3	0/1:29,1:23:15.10:15,0,88	0/1:29,0:28:0:0,0,0	1/1:25,1:26:6.28:111,6,0	1/1:29,1:27:5.45:216,5,0	1/1:7,12:24:6.02:104,6,0	0/0:24,0:21:44.92:0,45,524	0/0:29,0:24:5.50:0,5,220	0/0:11,0:7:8.96:0,9,88
chr10	19166215	.	C	CTG	451.40	PASS	AB=0.989;AC=14;AF=0.269;AN=52;BaseQRankSum=4.013;DP=647;FS=1.259;HRun=0;HaplotypeScore=136.1661;InbreedingCoeff=0.3964;MQ=41.21;MQ0=63;MQRankSum=1.088;QD=1.84;ReadPosRankSum=1.987;VQSLOD=2.6771;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:36:17.23:0,17,161	0/0:14,0:13:8.75:0,9,99	./.	./.	0/0:24,0:20:13.88:0,14,99	0/0:22,0:20:3.88:0,4,21	0/1:36,0:26:0.08:0,0,18	0/0:20,0:16:35.27:0,35,245	0/0:25,0:21:23.56:0,24,269	0/0:28,0:22:49.67:0,50,561	0/1:12,0:12:0.11:0,0,0	0/0:26,0:26:1.66:0,2,47	0/0:25,0:24:31.29:0,31,298	0/1:29,0:26:11.75:12,0,87	1/1:25,0:24:19.84:97,20,0	0/1:13,1:13:22.27:68,0,22	1/1:23,2:19:30.83:166,31,0	1/1:19,1:18:12.11:210,12,0	0/0:19,0:17:45.79:0,46,319	0/0:33,0:31:9.11:0,9,65	0/0:31,0:24:17.37:0,17,127	0/0:29,0:28:2.68:0,3,24	0/1:26,0:26:24.12:24,0,33	0/1:32,0:28:4.36:4,0,110	1/1:26,0:24:4.96:23,5,0	0/0:24,0:21:46.24:0,46,540	0/0:29,0:24:45.03:0,45,392	0/0:12,0:7:9.01:0,9,103
chr10	19166221	.	C	CTG	773.12	PASS	AB=0.943;AC=8;AF=0.154;AN=52;BaseQRankSum=2.060;DP=662;FS=0.000;HRun=0;HaplotypeScore=146.2958;InbreedingCoeff=0.0903;MQ=41.30;MQ0=62;MQRankSum=1.469;QD=5.02;ReadPosRankSum=3.077;VQSLOD=3.0664;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:38:14.22:0,14,135	0/0:16,0:15:8.26:0,8,96	./.	./.	0/0:25,0:22:14.43:0,14,115	0/0:22,0:20:3.88:0,4,28	0/0:38,0:28:8.99:0,9,75	0/0:21,0:16:41.24:0,41,278	0/0:26,0:22:23.59:0,24,275	0/0:31,0:25:37.99:0,38,544	0/1:11,0:11:0.11:0,0,0	0/0:28,0:28:7.89:0,8,100	0/0:23,0:22:34.14:0,34,305	0/1:28,0:25:11.86:12,0,106	0/1:24,0:23:10.11:10,0,59	0/1:13,3:16:27.45:172,0,27	0/1:19,6:19:26.36:289,0,26	1/1:13,7:18:6.66:403,7,0	0/0:19,0:18:45.72:0,46,308	0/0:35,0:33:13.17:0,13,104	0/0:30,0:24:20.60:0,21,152	0/0:27,0:26:2.89:0,3,25	0/0:21,0:21:1.75:0,2,62	0/0:33,0:29:11.31:0,11,148	0/1:29,0:27:6.67:7,0,41	0/0:29,0:25:53.84:0,54,599	0/0:28,0:23:43.28:0,43,396	0/0:12,0:7:9.01:0,9,102
chr10	19166223	.	CTG	C	2103.65	PASS	AB=0.994;AC=38;AF=0.731;AN=52;BaseQRankSum=7.338;DP=656;FS=3.159;HRun=0;HaplotypeScore=124.6522;InbreedingCoeff=-0.1687;MQ=41.02;MQ0=64;MQRankSum=5.877;QD=3.39;ReadPosRankSum=0.757;VQSLOD=2.7398;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:45,0:40:15.97:107,16,0	1/1:15,0:14:1.57:71,2,0	./.	./.	1/1:24,0:21:17.64:131,18,0	1/1:22,0:20:9.36:66,9,0	0/0:36,0:26:8.66:0,9,61	0/1:22,0:16:59.92:60,0,82	1/1:24,0:20:18.67:107,19,0	0/1:32,0:26:99:138,0,176	0/1:10,0:10:0.11:0,0,0	0/1:27,0:27:17.70:18,0,98	0/1:22,0:21:9.40:164,0,9	1/1:28,0:25:13.69:76,14,0	0/1:24,0:23:12.01:24,0,12	1/1:18,0:17:25.58:138,26,0	1/1:25,0:19:29.89:153,30,0	1/1:20,0:18:12.07:78,12,0	0/1:19,0:18:59.75:74,0,60	1/1:33,1:32:3.86:36,4,0	1/1:30,1:24:19.57:138,20,0	1/1:26,0:24:2.64:12,3,0	0/1:23,0:23:10.30:31,0,10	0/1:31,0:27:21.56:22,0,46	0/1:27,0:25:35.13:45,0,35	0/1:29,0:25:99:144,0,123	1/1:26,4:25:9.18:358,9,0	0/1:11,1:7:9.93:60,0,10
chr10	19166225	.	GTC	G	536.90	PASS	AB=0.956;AC=22;AF=0.423;AN=52;BaseQRankSum=-0.387;DP=657;FS=0.000;HRun=0;HaplotypeScore=131.8864;InbreedingCoeff=0.3015;MQ=41.05;MQ0=62;MQRankSum=1.986;QD=1.41;ReadPosRankSum=0.656;VQSLOD=2.4391;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:32,15:42:4.09:82,4,0	0/1:16,0:15:2.42:2,0,40	./.	./.	0/0:16,0:21:1.67:0,2,12	0/1:22,0:20:1.88:9,0,2	0/0:37,0:27:4.16:0,4,115	0/0:21,0:15:0:0,0,0	0/1:16,8:20:5.10:153,0,5	1/1:31,0:26:2.09:17,2,0	0/1:10,0:10:0:0,0,0	0/0:27,0:27:19.75:0,20,218	1/1:21,0:20:3.85:30,4,0	0/0:27,0:24:5.13:0,5,20	0/1:24,1:24:37.35:37,0,104	0/0:18,0:17:19.22:0,19,100	0/0:26,0:20:21.87:0,22,133	0/0:21,0:19:23.14:0,23,129	1/1:21,0:20:5.81:18,6,0	1/1:34,0:32:10.38:154,10,0	1/1:31,0:24:9.16:76,9,0	0/0:26,0:24:2.74:0,3,12	0/0:22,0:22:11.87:0,12,99	0/1:28,1:25:4.79:5,0,68	0/0:27,0:25:7.84:0,8,92	0/1:29,0:26:10.39:10,0,21	0/1:28,0:24:0.49:72,0,0	1/1:12,0:7:2.98:21,3,0
chr10	19167070	.	A	ATC	2462.35	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=2.588;DP=600;FS=7.678;HRun=0;HaplotypeScore=72.9360;InbreedingCoeff=0.9949;MQ=84.51;MQ0=0;MQRankSum=-4.088;QD=45.60;ReadPosRankSum=2.694;VQSLOD=4.8000;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,33:36:90.31:1650,90,0	0/0:7,0:7:21.05:0,21,282	0/0:23,0:23:69.18:0,69,921	0/0:14,0:14:36.11:0,36,513	0/0:21,0:21:60.18:0,60,841	0/0:24,0:24:60.20:0,60,860	0/0:27,0:27:69.22:0,69,967	0/0:25,0:25:69.21:0,69,955	1/1:0,18:18:51.17:934,51,0	0/0:27,0:27:78.26:0,78,1118	0/0:10,0:10:27.09:0,27,386	0/0:22,0:22:60.20:0,60,859	0/0:26,0:26:72.24:0,72,1030	0/0:27,0:27:81.27:0,81,1160	0/0:20,0:20:57.18:0,57,799	0/0:17,0:17:51.17:0,51,731	0/0:37,0:37:99:0,105,1482	0/0:37,0:37:99:0,108,1529	0/0:19,0:19:46.69:0,47,663	0/0:14,0:14:39.10:0,39,522	0/0:30,0:30:87.28:0,87,1228	0/0:13,0:13:36.12:0,36,516	0/0:7,0:7:21.07:0,21,301	0/0:22,0:22:60.18:0,60,841	0/0:11,0:11:30.10:0,30,430	0/0:31,0:31:87.29:0,87,1247	0/0:17,0:16:48.16:0,48,685	0/0:18,0:18:54.18:0,54,774
chr10	19168043	.	T	TG	2191.85	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-9.489;DP=607;FS=1.109;HRun=1;HaplotypeScore=68.6016;InbreedingCoeff=0.9975;MQ=76.74;MQ0=0;MQRankSum=-3.602;QD=38.45;ReadPosRankSum=-0.514;VQSLOD=3.8988;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,36:40:99:1684,114,0	0/0:9,0:9:24.08:0,24,312	0/0:14,0:14:23.55:0,24,415	0/0:12,0:12:30.01:0,30,361	0/0:23,0:23:60.19:0,60,779	0/0:22,0:22:60.19:0,60,778	0/0:20,0:20:60.19:0,60,776	0/0:22,0:22:63.20:0,63,817	1/1:1,16:17:42.14:629,42,0	0/0:24,0:24:72.23:0,72,922	0/0:18,0:18:54.18:0,54,701	0/0:20,0:20:60.20:0,60,779	0/0:23,0:23:69.21:0,69,881	0/0:26,0:26:78.25:0,78,1013	0/0:22,0:21:57.19:0,57,740	0/0:26,0:26:75.24:0,75,974	0/0:33,0:33:90.29:0,90,1169	0/0:20,0:20:60.20:0,60,779	0/0:31,0:31:87.28:0,87,1129	0/0:21,0:21:63.19:0,63,803	0/0:16,0:16:48.16:0,48,623	0/0:25,0:25:72.22:0,72,919	0/0:20,0:20:60.17:0,60,763	0/0:20,0:20:60.20:0,60,779	0/0:18,0:18:54.18:0,54,701	0/0:31,0:31:93.29:0,93,1196	0/0:18,0:18:54.13:0,54,682	0/0:16,0:16:48.16:0,48,623
chr10	19168277	.	A	AGGC	42005.27	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-7.558;DP=704;FS=1.382;HRun=0;HaplotypeScore=88.1917;InbreedingCoeff=0.9479;MQ=78.43;MQ0=0;MQRankSum=-9.642;QD=64.62;ReadPosRankSum=5.814;VQSLOD=6.5003;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,31:33:93.32:2255,93,0	1/1:2,10:12:30.10:704,30,0	0/0:33,0:28:72.22:0,72,1270	0/0:21,0:19:29.16:0,29,541	1/1:2,24:27:63.22:1545,63,0	1/1:4,29:34:90.31:2171,90,0	1/1:2,25:29:78.27:1880,78,0	1/1:6,21:27:69.22:1649,69,0	1/1:0,25:28:66.23:1621,66,0	1/1:3,27:30:87.30:2128,87,0	1/1:2,24:27:72.25:1757,72,0	1/1:5,23:31:80.93:1945,81,0	1/1:5,27:32:84.29:2067,84,0	1/1:1,18:20:51.17:1252,51,0	1/1:4,30:35:99:2386,99,0	1/1:2,29:32:84.29:2069,84,0	1/1:0,14:14:42.14:1030,42,0	1/1:1,11:12:36.12:830,36,0	1/1:3,12:16:48.16:1154,48,0	1/1:2,23:25:72.25:1765,72,0	1/1:2,17:19:51.18:1248,51,0	1/1:2,18:22:54.19:1320,54,0	1/1:3,23:27:72.25:1730,72,0	1/1:1,20:23:60.21:1436,60,0	1/1:0,22:23:60.21:1471,60,0	1/1:3,25:30:84.29:2009,84,0	1/1:2,34:37:99:2438,99,0	1/1:0,3:3:6.02:147,6,0
chr10	19169970	.	G	GGA	3046.15	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-10.118;DP=811;FS=1.576;HRun=0;HaplotypeScore=109.8806;InbreedingCoeff=0.9883;MQ=66.50;MQ0=2;MQRankSum=1.799;QD=35.01;ReadPosRankSum=4.134;VQSLOD=5.9849;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,120,1499	0/0:7,0:7:12.04:0,12,148	0/0:35,0:28:53.70:0,54,698	0/0:53,0:42:62.34:0,62,729	0/0:23,0:23:54.17:0,54,675	0/0:19,0:19:45.14:0,45,563	0/0:31,0:30:72.18:0,72,882	0/0:43,0:42:87.23:0,87,1045	0/0:21,0:21:57.18:0,57,713	0/0:27,0:27:60.19:0,60,749	0/0:20,0:20:42.12:0,42,514	0/0:34,0:34:93.29:0,93,1151	0/0:34,0:34:78.25:0,78,974	0/0:28,0:28:78.25:0,78,975	0/0:35,0:35:84.26:0,84,1038	1/1:6,35:41:99:1635,99,0	1/1:6,18:26:60.17:961,60,0	1/1:7,13:20:36.12:594,36,0	0/0:11,0:11:24.07:0,24,288	0/0:28,0:28:69.22:0,69,860	0/0:36,0:38:92.96:0,93,1116	0/0:15,0:15:36.11:0,36,448	0/0:22,0:22:48.15:0,48,598	0/0:43,0:43:99:0,108,1335	0/0:19,0:19:51.14:0,51,623	0/0:31,0:31:60.18:0,60,739	0/0:29,0:29:84.27:0,84,1049	0/0:24,0:24:61.44:0,61,753
chr10	19171474	.	TA	T	11174.37	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=10.197;DP=508;FS=1.928;HRun=1;HaplotypeScore=250.2469;InbreedingCoeff=0.9927;MQ=82.12;MQ0=0;MQRankSum=-10.728;QD=24.29;ReadPosRankSum=6.049;VQSLOD=4.4078;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,28:28:74.92:652,75,0	1/1:2,12:14:41.96:366,42,0	0/0:27,0:27:74.46:0,74,1114	0/0:21,0:21:32.96:0,33,870	1/1:1,23:25:63.11:572,63,0	1/1:1,16:17:50.74:408,51,0	1/1:1,15:16:47.94:394,48,0	1/1:3,22:25:74.21:626,74,0	1/1:0,21:21:62.91:519,63,0	1/1:1,20:21:62.96:547,63,0	1/1:0,15:15:44.93:374,45,0	1/1:3,22:25:74.82:617,75,0	1/1:0,16:16:47.92:393,48,0	1/1:1,14:15:44.91:376,45,0	1/1:2,28:30:86.91:729,87,0	1/1:2,19:21:62.91:517,63,0	1/1:0,16:16:44.80:375,45,0	1/1:1,8:9:26.99:236,27,0	1/1:1,15:16:48.01:425,48,0	1/1:1,22:23:65.70:556,66,0	1/1:1,7:8:20.90:162,21,0	1/1:1,20:21:62.90:513,63,0	1/1:1,11:12:35.94:292,36,0	1/1:2,10:12:20.77:178,21,0	1/1:1,15:16:44.94:369,45,0	1/1:0,16:16:47.86:411,48,0	1/1:0,15:15:44.98:388,45,0	1/1:0,7:7:20.98:179,21,0
chr10	19171476	.	TTGG	T	12182.60	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=10.470;DP=497;FS=0.000;HRun=0;HaplotypeScore=260.6555;InbreedingCoeff=0.9929;MQ=84.77;MQ0=0;MQRankSum=-11.364;QD=27.32;ReadPosRankSum=6.955;VQSLOD=4.4678;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,28:28:76.32:701,76,0	1/1:1,12:13:39.05:377,39,0	0/0:28,0:28:81.26:0,81,1800	0/0:23,0:23:62.11:0,62,1401	1/1:2,23:25:69.07:610,69,0	1/1:1,16:17:51:467,51,0	1/1:0,15:15:45.04:416,45,0	1/1:2,22:24:69.98:708,70,0	1/1:0,21:21:63.06:586,63,0	1/1:2,19:21:59.69:626,60,0	1/1:0,15:15:45.02:406,45,0	1/1:1,22:23:69.05:647,69,0	1/1:0,16:16:48.04:443,48,0	1/1:0,14:14:42.02:383,42,0	1/1:2,28:30:87.82:801,88,0	1/1:1,19:20:60.06:561,60,0	1/1:1,15:16:44.79:399,45,0	1/1:0,8:8:24.05:243,24,0	1/1:0,15:15:45.11:478,45,0	1/1:1,22:23:67.27:610,67,0	1/1:1,7:8:22.14:185,22,0	1/1:0,21:21:63.06:576,63,0	1/1:1,11:12:35.92:314,36,0	1/1:0,10:10:21:187,21,0	1/1:0,15:15:43.28:390,43,0	1/1:4,10:14:42.03:430,42,0	1/1:0,15:15:45.06:434,45,0	1/1:0,7:7:21.04:206,21,0
chr10	19171480	.	CAA	C	11730.70	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=10.388;DP=496;FS=0.000;HRun=7;HaplotypeScore=253.7138;InbreedingCoeff=0.9901;MQ=85.10;MQ0=0;MQRankSum=-11.345;QD=26.48;ReadPosRankSum=7.593;VQSLOD=1.4319;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,28:29:63.04:592,63,0	1/1:1,12:13:36.05:345,36,0	0/0:28,0:28:75.24:0,75,1223	0/0:25,0:25:68.40:0,68,1038	1/1:0,23:24:59.87:535,60,0	1/1:2,16:18:51.03:479,51,0	1/1:0,15:15:45.07:429,45,0	1/1:0,22:22:66.14:675,66,0	1/1:0,21:21:63.10:602,63,0	1/1:0,19:20:60.13:611,60,0	1/1:0,15:15:42.05:393,42,0	1/1:2,22:24:69.05:651,69,0	1/1:1,16:17:51.02:474,51,0	1/1:0,14:15:42.04:393,42,0	1/1:1,28:29:84.04:786,84,0	1/1:0,19:19:57.09:547,57,0	1/1:1,15:16:36.03:339,36,0	1/1:0,8:8:24.05:237,24,0	1/1:0,15:15:45.10:462,45,0	1/1:0,22:22:60:556,60,0	1/1:1,7:8:20.84:176,21,0	1/1:0,21:21:63.06:582,63,0	1/1:1,11:12:35.88:321,36,0	1/1:0,10:10:17.97:167,18,0	1/1:0,15:15:45.02:420,45,0	1/1:3,10:13:33.04:325,33,0	1/1:0,15:15:45.06:429,45,0	1/1:0,7:7:21.04:205,21,0
chr10	19175386	.	C	CT	22175.60	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-8.498;DP=705;FS=0.647;HRun=4;HaplotypeScore=60.4186;InbreedingCoeff=0.9855;MQ=80.86;MQ0=0;MQRankSum=-9.279;QD=33.40;ReadPosRankSum=5.471;VQSLOD=5.0221;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,27:30:75.23:1001,75,0	1/1:0,5:5:15.05:199,15,0	0/0:27,0:27:67.26:0,67,750	0/0:14,0:14:21.75:0,22,372	1/1:3,36:39:99:1364,105,0	1/1:1,23:24:57.19:779,57,0	1/1:1,28:29:69.23:944,69,0	1/1:5,37:42:99:1396,111,0	1/1:0,28:28:63.21:860,63,0	1/1:2,33:34:99:1289,99,0	1/1:2,33:35:96.20:1255,96,0	1/1:1,27:28:72.24:984,72,0	1/1:1,25:26:69.23:941,69,0	1/1:3,24:27:69.23:941,69,0	1/1:2,30:32:81.27:1107,81,0	1/1:0,25:25:51.17:697,51,0	1/1:0,23:23:60.20:820,60,0	1/1:2,19:21:54.18:738,54,0	1/1:3,24:27:72.18:892,72,0	1/1:2,23:25:69.13:900,69,0	1/1:4,12:16:27.09:369,27,0	1/1:2,22:24:63.14:830,63,0	1/1:1,21:22:54.11:711,54,0	1/1:2,20:22:54.18:738,54,0	1/1:3,22:25:45.15:613,45,0	1/1:3,23:26:75.24:996,75,0	1/1:5,16:21:42.14:568,42,0	1/1:1,6:7:18.06:246,18,0
chr10	19176665	.	TA	T	8482.64	PASS	AB=0.529;AC=51;AF=0.911;AN=56;BaseQRankSum=-6.237;DP=635;FS=0.966;HRun=10;HaplotypeScore=91.4609;InbreedingCoeff=0.7706;MQ=70.89;MQ0=4;MQRankSum=-4.066;QD=13.79;ReadPosRankSum=4.018;VQSLOD=5.1267;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,29:34:77.95:673,78,0	1/1:0,12:12:35.99:313,36,0	0/0:15,0:15:17.10:0,17,207	0/0:5,0:5:10.27:0,10,101	1/1:3,30:33:89.93:774,90,0	1/1:2,0:30:50.93:150,51,0	1/1:0,0:17:34.63:102,35,0	1/1:3,0:36:60.95:178,61,0	1/1:2,32:34:92.98:807,93,0	1/1:4,21:25:65.96:568,66,0	1/1:3,23:26:59.96:521,60,0	1/1:3,0:25:40.73:120,41,0	1/1:4,26:30:68.98:599,69,0	1/1:3,0:25:28.03:93,28,0	1/1:2,15:17:44.99:391,45,0	1/1:0,17:17:44.99:391,45,0	1/1:4,14:18:35.99:313,36,0	1/1:0,17:17:47.99:417,48,0	1/1:5,0:26:41.20:121,41,0	1/1:1,0:27:52.96:156,53,0	1/1:1,0:16:28.52:84,29,0	1/1:2,0:21:30.54:90,31,0	1/1:1,0:19:25.23:86,25,0	1/1:6,0:22:34.40:100,34,0	1/1:2,0:27:37.72:126,38,0	1/1:1,23:24:68.93:586,69,0	1/1:1,23:24:65.96:568,66,0	0/1:1,8:9:9.18:158,0,9
chr10	19177289	.	A	AACTAATATAATATAATATTATATATTGGAT	32654.05	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=9.027;DP=541;FS=0.000;HRun=0;HaplotypeScore=378.3689;InbreedingCoeff=0.9936;MQ=84.49;MQ0=1;MQRankSum=-16.176;QD=207.99;ReadPosRankSum=-0.491;VQSLOD=3.8042;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,111,6935	1/1:6,0:6:18.06:991,18,0	0/0:24,0:24:65.58:0,66,3034	0/0:15,0:15:39:0,39,1717	1/1:12,1:13:21.07:1056,21,0	0/0:19,0:19:57.19:0,57,3923	0/0:14,0:14:36.12:0,36,2584	0/0:43,0:42:99:0,120,6938	0/0:21,0:21:63.22:0,63,4374	1/1:10,2:12:30.10:3548,30,0	1/1:15,0:15:39.12:2366,39,0	0/0:18,0:18:54.17:0,54,3475	1/1:11,1:16:30.57:1779,31,0	0/0:20,0:20:60.21:0,60,4391	0/0:26,0:26:75.26:0,75,4892	1/1:11,3:14:42.14:2828,42,0	1/1:9,2:12:33.11:3734,33,0	1/1:12,0:12:36.11:2856,36,0	0/0:19,0:19:54.17:0,54,3302	0/0:29,0:29:84.29:0,84,5188	0/0:15,0:14:42.14:0,42,2983	0/0:25,0:25:72.23:0,72,4846	0/0:22,0:22:66.21:0,66,3757	0/0:9,0:9:27.09:0,27,2084	0/0:28,0:28:84.29:0,84,5845	1/1:26,1:29:84.29:6386,84,0	1/1:12,0:12:12.23:2240,12,0	1/1:12,3:15:45.15:4869,45,0
chr10	19178347	.	AC	A	1698.33	PASS	AB=0.942;AC=28;AF=0.519;AN=54;BaseQRankSum=1.888;DP=228;FS=44.684;HRun=9;HaplotypeScore=42.1414;InbreedingCoeff=0.5476;MQ=86.69;MQ0=0;MQRankSum=-0.294;QD=13.92;ReadPosRankSum=2.550;VQSLOD=0.5663;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,11:15:27.01:247,27,0	1/1:0,4:4:12.01:110,12,0	0/1:9,1:10:27.41:27,0,178	0/0:12,0:11:11.39:0,11,80	1/1:1,1:2:3:27,3,0	./.	0/0:10,0:10:9.15:0,9,54	0/0:12,0:16:1.24:0,1,3	1/1:3,3:6:15.01:136,15,0	1/1:0,8:8:24.01:219,24,0	1/1:1,0:1:3:27,3,0	0/0:1,0:3:5.81:0,6,34	1/1:2,11:13:36.02:327,36,0	0/0:0,0:3:2.84:0,3,14	1/1:0,9:9:21:192,21,0	0/0:10,0:10:21.06:0,21,242	0/1:15,3:18:34.23:34,0,401	0/0:13,0:12:36.09:0,36,400	0/0:8,0:8:8.67:0,9,48	0/1:5,0:5:0:0,0,0	0/0:16,0:18:10.93:0,11,80	1/1:1,0:1:0.47:1,0,0	0/0:5,0:5:0.47:0,0,1	0/1:8,0:10:0.03:0,0,55	0/0:3,0:3:0.47:0,0,1	1/1:1,8:9:24.01:219,24,0	1/1:2,7:9:27.01:246,27,0	1/1:0,2:2:6:55,6,0
chr10	19182775	.	GTTCACCTCTC	G	24351.90	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=18.744;DP=687;FS=4.986;HRun=0;HaplotypeScore=223.6325;InbreedingCoeff=0.9863;MQ=85.77;MQ0=0;MQRankSum=-19.565;QD=72.05;ReadPosRankSum=1.032;VQSLOD=4.3115;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,32:38:81.23:2559,81,0	0/0:16,0:16:45.15:0,45,2394	0/0:33,0:33:87.30:0,87,4191	0/0:25,0:25:72.22:0,72,3106	0/0:26,0:26:78.25:0,78,3831	1/1:3,25:28:66.23:2201,66,0	1/1:2,21:23:54.19:1799,54,0	1/1:8,13:21:39.11:1194,39,0	1/1:1,25:26:63.22:2101,63,0	0/0:24,0:24:72.25:0,72,3796	0/0:19,0:19:57.18:0,57,2851	1/1:2,28:30:75.26:2501,75,0	0/0:32,0:32:93.32:0,93,4871	1/1:2,31:33:71.98:2338,72,0	0/0:33,0:33:99:0,99,5105	0/0:25,0:25:75.26:0,75,3874	0/0:30,0:30:90.31:0,90,4725	0/0:16,0:16:48.16:0,48,2501	1/1:2,13:15:39.13:1244,39,0	1/1:1,28:29:72.20:2132,72,0	1/1:5,9:14:21.07:695,21,0	1/1:2,26:28:67.11:2199,67,0	1/1:3,17:21:54.19:1787,54,0	1/1:5,10:15:6.49:201,6,0	1/1:2,15:17:42.14:1401,42,0	0/0:30,0:30:84.28:0,84,4339	0/0:27,0:26:81.28:0,81,4143	0/0:13,0:13:39.13:0,39,1979
chr10	19183494	.	T	TTCTC	45735.88	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-9.151;DP=778;FS=0.000;HRun=0;HaplotypeScore=105.6048;InbreedingCoeff=0.9707;MQ=83.12;MQ0=0;MQRankSum=-10.958;QD=63.17;ReadPosRankSum=6.048;VQSLOD=6.4546;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,34:39:96.33:2504,96,0	1/1:1,14:15:42.14:1100,42,0	0/0:30,0:30:75.12:0,75,1224	0/0:24,0:24:54.13:0,54,926	1/1:3,19:23:57.20:1503,57,0	1/1:0,21:21:63.22:1662,63,0	1/1:11,20:33:63.22:1614,63,0	1/1:8,24:33:84.25:1957,84,0	1/1:1,19:21:51.18:1345,51,0	1/1:9,29:42:99:2635,108,0	1/1:5,21:26:63.22:1642,63,0	1/1:3,34:38:99:2689,102,0	1/1:0,25:26:71.94:1898,72,0	1/1:3,32:36:96.33:2518,96,0	1/1:2,32:36:90.31:2350,90,0	1/1:2,25:29:75.26:1966,75,0	1/1:9,31:41:87.30:2274,87,0	1/1:2,20:22:57.20:1504,57,0	1/1:3,11:14:36.12:944,36,0	1/1:5,23:32:81.28:2062,81,0	1/1:2,32:36:93.30:2377,93,0	1/1:3,22:26:60.21:1583,60,0	1/1:6,19:25:54.19:1386,54,0	1/1:9,24:34:75.26:1926,75,0	1/1:4,20:25:57.20:1505,57,0	1/1:5,18:24:60.18:1471,60,0	1/1:5,12:16:42.01:1085,42,0	1/1:2,8:10:9.03:238,9,0
chr10	19185802	.	CTTGGT	C	10469.07	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=17.442;DP=559;FS=11.842;HRun=0;HaplotypeScore=122.5770;InbreedingCoeff=0.9985;MQ=82.68;MQ0=0;MQRankSum=-17.335;QD=56.59;ReadPosRankSum=-1.057;VQSLOD=4.4910;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,111,3697	0/0:12,0:12:36.12:0,36,1199	0/0:22,0:22:66.22:0,66,2063	0/0:17,0:17:48.14:0,48,1371	0/0:12,0:12:36.12:0,36,1147	1/1:0,12:12:36.12:802,36,0	1/1:0,12:12:36.12:802,36,0	1/1:0,24:24:69.24:1488,69,0	0/0:27,0:27:81.28:0,81,2701	0/0:18,0:18:54.19:0,54,1744	0/0:15,0:15:45.15:0,45,1469	1/1:1,19:20:54.10:1199,54,0	0/0:26,0:26:78.27:0,78,2598	1/1:0,24:24:57.20:1270,57,0	0/0:36,0:36:99:0,108,3565	0/0:27,0:27:81.28:0,81,2693	0/0:20,0:20:60.21:0,60,1922	0/0:41,0:41:99:0,123,4098	1/1:1,13:14:39.13:858,39,0	1/1:0,9:9:27.09:599,27,0	1/1:0,13:13:21.07:402,21,0	1/1:0,13:13:30.10:669,30,0	1/1:2,11:13:36.10:713,36,0	1/1:0,11:11:21.07:422,21,0	1/1:0,20:20:57.20:1245,57,0	0/0:29,0:29:87.30:0,87,2889	0/0:22,0:22:66.23:0,66,2185	0/0:13,0:13:39.13:0,39,1243
chr10	19186496	.	A	AGT	2562.79	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-11.129;DP=676;FS=5.910;HRun=0;HaplotypeScore=79.0741;InbreedingCoeff=0.9984;MQ=77.47;MQ0=0;MQRankSum=-0.704;QD=33.72;ReadPosRankSum=3.443;VQSLOD=5.8871;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,135,1660	0/0:14,0:14:36.11:0,36,446	0/0:27,0:25:45.13:0,45,544	0/0:27,0:26:51.13:0,51,611	0/0:22,0:22:54.02:0,54,636	0/0:22,0:22:54.16:0,54,657	0/0:12,0:12:33.08:0,33,384	0/0:31,0:31:66.20:0,66,809	0/0:26,0:26:72.23:0,72,893	0/0:15,0:15:39.12:0,39,484	0/0:26,0:26:75.21:0,75,899	0/0:25,0:25:66.21:0,66,818	0/0:21,0:21:63.20:0,63,781	0/0:24,0:24:60.17:0,60,722	0/0:18,0:18:54:0,54,646	1/1:2,16:19:42.05:689,42,0	1/1:5,28:33:75.26:1230,75,0	1/1:5,17:23:48.16:787,48,0	0/0:16,0:17:41.95:0,42,486	0/0:25,0:25:62.56:0,63,752	0/0:23,0:23:51.13:0,51,606	0/0:34,0:34:93.24:0,93,1125	0/0:25,0:25:60.19:0,60,744	0/0:19,0:19:51.16:0,51,632	0/0:24,0:24:63.18:0,63,758	0/0:31,0:31:75.24:0,75,930	0/0:35,0:35:96.27:0,96,1163	0/0:7,0:7:21.07:0,21,260
chr10	19186889	.	AG	A	2688.62	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.606;DP=754;FS=2.150;HRun=1;HaplotypeScore=68.9919;InbreedingCoeff=0.9998;MQ=83.65;MQ0=0;MQRankSum=-5.614;QD=37.34;ReadPosRankSum=3.176;VQSLOD=4.3281;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,52:52:99:2055,147,0	0/0:13,0:13:39.13:0,39,621	0/0:31,0:31:92.97:0,93,1266	0/0:18,0:18:42.10:0,42,592	0/0:27,0:27:81.26:0,81,1267	0/0:26,0:26:78.27:0,78,1242	0/0:37,0:37:99:0,111,1672	0/0:30,0:30:90.30:0,90,1417	1/1:0,20:20:54.18:755,54,0	0/0:34,0:34:99:0,102,1629	0/0:27,0:27:81.28:0,81,1292	0/0:28,0:28:84.29:0,84,1342	0/0:21,0:21:63.21:0,63,1004	0/0:28,0:28:84.27:0,84,1314	0/0:36,0:36:99:0,108,1719	0/0:23,0:23:69.21:0,69,1057	0/0:25,0:25:75.26:0,75,1198	0/0:30,0:30:90.29:0,90,1414	0/0:26,0:26:78.25:0,78,1206	0/0:29,0:29:87.30:0,87,1384	0/0:36,0:36:99:0,105,1649	0/0:22,0:22:66.21:0,66,1029	0/0:15,0:15:45.14:0,45,692	0/0:25,0:25:75.24:0,75,1171	0/0:38,0:38:99:0,114,1788	0/0:22,0:22:66.23:0,66,1054	0/0:24,0:23:72.21:0,72,1102	0/0:11,0:11:33.11:0,33,526
chr10	19187789	.	TAC	T	578.09	PASS	AB=0.950;AC=28;AF=0.560;AN=50;BaseQRankSum=-0.496;DP=569;FS=18.943;HRun=0;HaplotypeScore=128.7350;InbreedingCoeff=0.2962;MQ=49.17;MQ0=22;MQRankSum=2.269;QD=1.70;ReadPosRankSum=1.975;VQSLOD=1.3961;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:37,0:35:18.30:20,0,18	1/1:1,1:3:6.01:64,6,0	./.	./.	1/1:14,1:16:11.69:97,12,0	1/1:18,0:18:5.87:41,6,0	1/1:25,0:24:2.80:13,3,0	./.	1/1:22,0:22:2.84:14,3,0	0/0:16,0:16:1.25:0,1,14	0/0:9,0:10:2.37:0,2,8	1/1:25,2:23:2.81:51,3,0	1/1:16,0:15:9.90:63,10,0	0/1:24,2:25:22.85:26,0,23	1/1:21,2:23:8.73:77,9,0	0/0:12,0:17:2.99:0,3,24	0/0:26,0:24:4.83:0,5,21	0/0:17,0:15:6.70:0,7,53	1/1:10,0:8:0.47:1,0,0	1/1:15,0:15:5.24:24,5,0	0/0:53,0:52:1.87:0,2,7	1/1:11,1:12:9.01:87,9,0	0/0:9,0:8:3.01:0,3,36	1/1:39,2:40:2.90:32,3,0	0/0:14,1:16:2.92:0,3,17	0/1:24,0:25:1.01:1,0,18	0/1:18,1:19:2.09:110,0,2	0/0:3,0:3:3.06:0,3,8
chr10	19187848	.	ACG	A	329.22	PASS	AB=0.966;AC=15;AF=0.300;AN=50;BaseQRankSum=3.993;DP=552;FS=54.707;HRun=0;HaplotypeScore=95.4546;InbreedingCoeff=0.1035;MQ=30.18;MQ0=45;MQRankSum=-3.843;QD=1.74;ReadPosRankSum=-1.543;VQSLOD=-0.4209;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:27:9.02:0,9,141	1/1:2,0:2:2.37:8,2,0	0/0:25,0:6:14.70:0,15,145	0/0:31,0:7:7.82:0,8,104	1/1:17,0:15:2.37:8,2,0	1/1:17,0:17:2.07:7,2,0	0/0:22,0:18:2.57:0,3,37	0/1:20,1:18:7.12:7,0,517	0/0:16,0:16:9.03:0,9,135	0/1:19,1:16:5.57:148,0,6	./.	0/0:28,0:26:17.50:0,18,219	0/1:16,2:15:0.02:51,0,0	0/0:31,1:31:7.11:0,7,121	0/0:24,0:22:6.73:0,7,63	0/0:24,0:22:5.78:0,6,111	0/1:23,0:18:7.11:7,0,89	0/1:22,0:19:28.70:29,0,347	0/0:22,0:17:40.90:0,41,441	0/1:17,0:14:35.50:36,0,52	0/0:32,0:24:6.85:0,7,78	./.	0/0:10,0:10:0.89:0,1,2	./.	0/0:16,0:16:4.26:0,4,61	0/1:19,1:17:53.60:69,0,54	1/1:12,0:9:1.41:89,1,0	0/0:6,0:6:2.10:0,2,25
chr10	19187867	.	CACACAT	C	1464.37	PASS	AB=1.000;AC=16;AF=0.333;AN=48;BaseQRankSum=4.441;DP=570;FS=3.801;HRun=0;HaplotypeScore=113.9256;InbreedingCoeff=0.3348;MQ=28.91;MQ0=25;MQRankSum=-2.071;QD=7.18;ReadPosRankSum=-0.253;VQSLOD=2.3263;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:21:9.02:0,9,151	./.	0/0:50,0:12:34:0,34,801	0/0:48,0:14:39.80:0,40,798	./.	0/0:18,0:18:0.47:0,0,1	0/0:23,0:22:3.38:0,3,70	0/1:25,0:24:61.77:62,0,463	0/0:25,0:25:3.88:0,4,91	1/1:13,5:15:37.54:551,38,0	./.	0/0:28,0:27:13.71:0,14,258	1/1:9,8:15:20.92:345,21,0	0/1:31,0:31:32.44:32,0,74	0/0:7,12:17:0.47:0,0,1	0/0:21,0:20:5.61:0,6,83	0/0:16,0:14:17.20:0,17,291	0/1:18,0:18:4.46:4,0,296	0/1:16,0:12:19.42:19,0,385	0/0:14,0:13:3.01:0,3,81	0/0:34,0:28:3.36:0,3,23	0/0:14,0:14:0:0,0,0	./.	0/1:30,0:29:0:0,0,0	0/1:15,0:15:0:0,0,0	1/1:14,4:16:32.09:464,32,0	1/1:7,2:7:3.01:69,3,0	1/1:4,3:7:3.01:57,3,0
chr10	19187869	.	CACAT	C	360.72	PASS	AB=0.989;AC=12;AF=0.261;AN=46;BaseQRankSum=4.447;DP=568;FS=12.861;HRun=0;HaplotypeScore=116.4395;InbreedingCoeff=0.1088;MQ=29.19;MQ0=24;MQRankSum=-1.059;QD=1.95;ReadPosRankSum=2.308;VQSLOD=1.4324;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:21:9.02:0,9,128	./.	0/0:49,0:14:39.98:0,40,815	0/0:48,0:15:43.24:0,43,762	./.	0/0:16,2:18:0.47:0,0,1	0/0:24,0:23:5.11:0,5,77	0/1:23,0:23:7.19:7,0,456	0/0:25,0:25:2.82:0,3,135	0/1:16,1:15:16.37:148,0,16	./.	0/0:28,1:28:14.57:0,15,248	1/1:17,1:16:11.78:119,12,0	0/1:30,1:31:34.68:35,0,56	0/0:19,0:17:0.47:0,0,1	0/0:20,0:19:6.02:0,6,126	0/0:13,0:12:18.06:0,18,405	0/0:18,0:18:23.16:0,23,383	0/1:16,0:12:13.11:13,0,366	0/0:15,0:14:3.01:0,3,77	0/0:33,1:28:2.86:0,3,23	./.	./.	0/1:30,0:29:0:0,0,0	0/1:14,0:14:0.11:0,0,0	0/1:19,0:17:39.94:116,0,40	0/1:10,0:8:9.75:25,0,10	1/1:7,0:7:2.98:21,3,0
chr10	19187873	.	T	TAC	1101.75	PASS	AB=0.928;AC=24;AF=0.545;AN=44;BaseQRankSum=6.065;DP=548;FS=4.873;HRun=0;HaplotypeScore=113.2682;InbreedingCoeff=0.0267;MQ=28.73;MQ0=20;MQRankSum=-1.576;QD=3.30;ReadPosRankSum=0.995;VQSLOD=2.2527;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/1:1,0:1:0:0,0,0	0/0:51,0:16:38.47:0,38,447	0/0:48,0:15:41.71:0,42,439	./.	0/1:16,2:18:0:0,0,0	0/1:13,11:23:8.86:9,0,11	0/1:21,8:29:99:195,0,168	0/1:25,0:25:15.86:38,0,16	1/1:17,0:16:38.72:310,39,0	./.	0/1:29,2:30:8.76:9,0,41	1/1:20,0:18:22.81:139,23,0	1/1:25,1:26:1.12:46,1,0	0/1:20,0:19:0.09:0,0,0	0/1:20,0:19:13.02:33,0,13	0/1:11,0:10:20.22:20,0,83	0/1:16,0:16:30.31:30,0,96	0/1:14,2:13:43.82:108,0,44	0/0:11,1:12:3:0,3,25	0/1:30,2:27:0:0,0,0	./.	./.	0/0:28,2:29:0.47:0,0,1	./.	1/1:16,0:15:35.02:262,35,0	1/1:6,0:4:5.42:25,5,0	1/1:6,0:6:0.87:2,1,0
chr10	19187885	.	CACACTT	C	832.78	PASS	AB=1.000;AC=21;AF=0.500;AN=42;BaseQRankSum=3.441;DP=500;FS=1.664;HRun=0;HaplotypeScore=106.1570;InbreedingCoeff=0.2946;MQ=30.68;MQ0=11;MQRankSum=-0.028;QD=3.43;ReadPosRankSum=-1.678;VQSLOD=1.6077;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:46,0:14:34.18:0,34,836	0/0:38,0:12:20.94:0,21,586	./.	0/0:19,0:18:0.34:0,0,1	1/1:28,0:27:2.06:31,2,0	0/1:27,0:27:4.54:72,0,5	1/1:23,0:23:5.97:43,6,0	1/1:18,0:18:37.02:294,37,0	./.	0/1:26,0:26:3.65:4,0,67	1/1:20,0:19:17.79:164,18,0	1/1:25,0:25:2.28:17,2,0	0/0:2,15:17:0:0,0,0	0/0:20,0:19:0.78:0,1,2	0/0:10,0:10:5.20:0,5,74	0/1:10,0:10:8.79:9,0,126	0/1:14,0:13:61.40:61,0,172	./.	0/1:26,0:23:0.38:0,0,0	0/0:13,0:13:0:0,0,0	./.	./.	0/0:13,0:13:0:0,0,0	1/1:15,0:15:15.85:199,16,0	1/1:6,0:5:3.48:34,3,0	1/1:5,0:5:2.99:24,3,0
chr10	19187887	.	CACTT	C	2597.61	PASS	AB=0.964;AC=26;AF=0.650;AN=40;BaseQRankSum=2.961;DP=497;FS=0.807;HRun=0;HaplotypeScore=92.6716;InbreedingCoeff=0.1758;MQ=30.84;MQ0=12;MQRankSum=0.756;QD=8.69;ReadPosRankSum=0.276;VQSLOD=2.6755;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:48,0:14:25.37:0,25,732	0/0:37,0:12:6.76:0,7,474	./.	0/0:15,4:18:0.34:0,0,1	1/1:26,2:27:2.38:27,2,0	0/1:25,2:27:4.15:374,0,4	1/1:22,1:23:8.67:80,9,0	1/1:13,5:18:45.48:639,45,0	./.	0/1:25,0:25:8.15:8,0,16	1/1:11,9:19:18.51:290,19,0	1/1:25,0:25:2.03:28,2,0	0/1:16,1:17:0:0,0,0	1/1:19,0:18:3.01:46,3,0	0/1:8,1:9:22.68:64,0,23	0/1:8,0:8:36.89:79,0,37	0/1:14,1:14:3.19:301,0,3	./.	0/1:25,0:23:0.21:0,0,0	./.	./.	./.	0/1:14,0:14:0:0,0,0	1/1:10,5:15:41.87:625,42,0	1/1:5,1:5:6.02:96,6,0	1/1:4,1:4:3.01:58,3,0
chr10	19187889	.	CTT	C	2671.92	PASS	AB=0.823;AC=27;AF=0.675;AN=40;BaseQRankSum=4.140;DP=475;FS=3.162;HRun=2;HaplotypeScore=86.2239;InbreedingCoeff=0.2384;MQ=30.88;MQ0=13;MQRankSum=-0.249;QD=9.31;ReadPosRankSum=1.114;VQSLOD=0.7634;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:48,0:13:15.32:0,15,544	0/0:35,1:12:5.80:0,6,373	./.	0/0:12,5:16:0.34:0,0,1	1/1:11,17:27:2.42:16,2,0	0/1:9,18:27:6.65:425,0,7	1/1:17,5:23:8.53:76,9,0	1/1:6,11:17:45.09:633,45,0	./.	0/1:19,6:25:6.62:20,0,7	1/1:11,6:17:18:232,18,0	1/1:18,6:24:9.34:54,9,0	0/1:17,0:17:0:0,0,0	1/1:11,4:14:2.89:48,3,0	0/1:8,1:9:14.15:106,0,14	0/1:5,3:8:17.40:62,0,17	1/1:11,3:13:32.72:420,33,0	./.	0/1:17,6:21:0:1,0,0	./.	./.	./.	0/1:13,1:14:0:0,0,0	1/1:5,10:15:42.12:583,42,0	1/1:2,4:5:6.01:77,6,0	1/1:2,3:4:3.01:38,3,0
chr10	19187891	.	T	TATATACAC	3124.39	PASS	AB=0.733;AC=32;AF=0.762;AN=42;BaseQRankSum=3.050;DP=503;FS=0.000;HRun=0;HaplotypeScore=118.0353;InbreedingCoeff=0.3454;MQ=30.62;MQ0=12;MQRankSum=0.473;QD=8.80;ReadPosRankSum=2.457;VQSLOD=2.0907;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:43,0:13:34.90:0,35,761	0/0:34,0:11:29.98:0,30,508	./.	1/1:15,3:17:0.26:1,0,0	1/1:27,0:26:2.05:50,2,0	1/1:28,0:28:15.62:791,16,0	0/1:10,0:24:27.55:28,0,34	1/1:18,0:18:13.97:269,14,0	./.	0/1:9,19:28:6.70:171,0,7	0/1:22,0:22:5.70:83,0,6	1/1:9,14:24:9.03:197,9,0	0/1:20,0:20:0.01:0,0,0	1/1:13,0:15:5.47:57,5,0	1/1:7,0:9:14.52:222,15,0	1/1:7,0:9:14.34:214,14,0	1/1:5,9:13:39.12:790,39,0	./.	0/1:11,15:25:0.16:0,0,0	0/1:2,11:13:0:0,0,0	./.	1/1:12,15:25:2.94:18,3,0	./.	1/1:17,0:17:39.65:272,40,0	1/1:7,0:6:3.45:23,3,0	1/1:7,0:6:5.14:63,5,0
chr10	19187910	.	ACGCGCGCGCG	A	1273.77	PASS	AB=0.873;AC=20;AF=0.417;AN=48;BaseQRankSum=-0.705;DP=414;FS=18.198;HRun=0;HaplotypeScore=113.3252;InbreedingCoeff=-0.1744;MQ=31.66;MQ0=12;MQRankSum=-0.907;QD=5.35;ReadPosRankSum=-1.962;VQSLOD=0.6301;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	1/1:1,1:2:3.01:65,3,0	0/0:16,0:6:8.02:0,8,233	0/1:7,1:3:17.97:18,0,57	./.	0/0:15,0:14:5.94:0,6,117	1/1:22,1:20:1.40:2,1,0	0/0:25,1:23:35.81:0,36,689	0/1:17,2:18:99:126,0,102	0/0:16,0:15:34.42:0,34,640	./.	0/1:25,0:24:39.82:40,0,59	0/1:14,5:22:99:201,0,202	0/1:21,0:21:40.22:40,0,187	0/0:21,0:21:7.49:0,7,45	0/1:13,8:20:69.37:69,0,127	1/1:10,2:11:11.85:182,12,0	0/1:7,0:7:27.56:28,0,154	0/1:12,2:14:99:173,0,531	./.	0/0:17,0:16:0.47:0,0,1	1/1:5,0:5:3:91,3,0	0/0:9,0:8:0:0,0,0	0/1:22,1:22:0:0,0,0	0/0:16,0:15:2.56:0,3,28	0/1:16,1:19:99:174,0,448	0/1:5,2:7:71.08:71,0,76	0/1:7,0:5:99:127,0,106
chr10	19187916	.	G	GCACACA	480.25	PASS	AB=1.000;AC=25;AF=0.521;AN=48;BaseQRankSum=0.588;DP=375;FS=30.157;HRun=0;HaplotypeScore=105.8721;InbreedingCoeff=-0.0693;MQ=32.93;MQ0=12;MQRankSum=-0.684;QD=1.94;ReadPosRankSum=-3.325;VQSLOD=-0.6602;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	1/1:2,0:2:3.01:51,3,0	0/0:11,0:4:0.04:0,0,35	./.	./.	0/1:16,0:15:22.50:22,0,29	1/1:19,0:16:0.04:0,0,0	0/1:23,0:20:13.77:14,0,516	0/1:19,0:18:32.33:70,0,32	0/0:17,0:16:18.63:0,19,299	./.	0/0:22,0:21:4.17:0,4,61	0/0:19,0:19:14.11:0,14,122	0/1:18,0:18:56.13:56,0,104	1/1:10,6:18:6.02:170,6,0	0/0:16,0:16:3.48:0,3,46	0/1:14,0:13:5.66:6,0,56	0/0:5,0:5:6.02:0,6,74	0/1:14,0:13:14.68:15,0,362	1/1:6,0:6:2.99:24,3,0	0/1:16,0:15:0:0,0,0	1/1:6,0:6:2.92:67,3,0	1/1:9,0:8:0.47:1,0,0	0/1:25,0:24:0.09:0,0,0	1/1:12,0:11:5.69:37,6,0	0/1:14,0:14:21.07:21,0,204	0/1:7,0:7:30.14:30,0,58	0/1:9,0:5:26.40:26,0,53
chr10	19190459	.	TACACACACACACACACACACAC	T	533.88	PASS	AC=4;AF=0.074;AN=54;BaseQRankSum=3.286;DP=478;FS=19.342;HRun=0;HaplotypeScore=219.4020;InbreedingCoeff=0.5864;MQ=66.33;MQ0=8;MQRankSum=-2.811;QD=10.27;ReadPosRankSum=-0.105;VQSLOD=0.6513;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:20,14:32:3.01:133,3,0	0/0:3,0:3:6.02:0,6,240	./.	0/0:28,0:18:3.01:0,3,89	0/0:11,0:11:24.08:0,24,1480	0/0:20,0:20:33.11:0,33,1630	0/0:15,0:16:18.06:0,18,1067	0/0:15,0:15:19.30:0,19,515	1/1:10,7:17:9.03:500,9,0	0/0:21,0:20:38.49:0,38,2016	0/0:8,0:7:9.03:0,9,430	0/0:23,0:22:26.45:0,26,2048	0/0:6,0:6:6.02:0,6,470	0/0:17,0:17:27.09:0,27,2143	0/0:15,0:14:18.04:0,18,1202	0/0:10,0:10:9.03:0,9,540	0/0:21,0:23:36.12:0,36,2120	0/0:16,0:16:30.10:0,30,1832	0/0:18,0:18:27.68:0,28,1250	0/0:8,0:8:6.01:0,6,122	0/0:40,0:39:66.23:0,66,5179	0/0:12,0:12:18.06:0,18,1687	0/0:7,0:6:9.03:0,9,776	0/0:19,0:21:21.07:0,21,1753	0/0:13,0:13:12.04:0,12,952	0/0:20,0:20:47.53:0,48,3387	0/0:19,0:21:27.08:0,27,1739	0/0:9,0:9:16.87:0,17,959
chr10	19192183	.	T	TACACACTCAC	1991.08	PASS	AB=0.857;AC=15;AF=0.268;AN=56;BaseQRankSum=-0.460;DP=570;FS=0.000;HRun=0;HaplotypeScore=146.8802;InbreedingCoeff=0.5194;MQ=67.28;MQ0=10;MQRankSum=-0.292;QD=8.77;ReadPosRankSum=-1.926;VQSLOD=2.3034;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:22:99:99,0,161	0/0:7,0:9:17.77:0,18,224	0/0:28,0:17:28.19:0,28,316	0/0:32,0:23:47.96:0,48,430	0/0:16,0:18:32.99:0,33,359	0/0:17,0:18:38.87:0,39,405	0/0:31,0:31:40.32:0,40,612	0/0:23,0:23:43.80:0,44,361	0/1:8,0:14:23.59:24,0,47	0/0:18,0:17:41.64:0,42,537	0/1:7,0:7:75.58:76,0,98	0/0:14,0:15:32.84:0,33,331	0/0:25,0:25:46.49:0,46,517	0/0:13,0:13:29.86:0,30,361	1/1:24,0:24:12.38:75,12,0	1/1:3,12:18:2.55:129,3,0	0/1:9,13:25:0.47:369,0,0	1/1:6,18:26:7.24:63,7,0	1/1:15,0:15:41.95:613,42,0	1/1:23,0:22:0.24:276,0,0	0/1:48,0:47:1.91:436,0,2	0/0:15,0:17:29.63:0,30,437	0/0:10,0:12:24.02:0,24,325	0/0:31,0:31:59.96:0,60,909	0/0:10,0:10:18.01:0,18,206	0/0:15,0:15:31.06:0,31,314	0/0:12,0:17:38.58:0,39,403	0/0:7,0:7:17.47:0,17,138
chr10	19192184	.	A	ACACACT	1627.92	PASS	AB=0.993;AC=13;AF=0.232;AN=56;BaseQRankSum=-0.079;DP=583;FS=1.255;HRun=0;HaplotypeScore=122.5804;InbreedingCoeff=0.5259;MQ=66.54;MQ0=10;MQRankSum=-0.253;QD=7.30;ReadPosRankSum=-1.777;VQSLOD=2.2563;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:22:57.41:57,0,161	0/0:9,0:9:17.99:0,18,196	0/0:28,0:17:28.19:0,28,316	0/0:32,0:23:47.96:0,48,430	0/0:18,0:17:32.78:0,33,346	0/0:20,0:19:38.52:0,39,337	0/0:31,0:30:64.88:0,65,581	0/0:21,0:21:47.91:0,48,375	0/1:16,0:15:24.72:25,0,47	0/0:20,0:19:42.90:0,43,508	0/0:10,0:9:5.85:0,6,94	0/0:16,0:16:32.84:0,33,303	0/0:26,0:26:57.96:0,58,555	0/0:13,0:13:29.86:0,30,325	1/1:25,0:25:12.08:159,12,0	1/1:18,0:18:3.76:61,4,0	0/1:25,0:24:3.68:86,0,4	0/1:25,1:24:19.34:19,0,23	1/1:2,13:16:42.04:626,42,0	1/1:24,0:23:23.98:300,24,0	0/1:51,0:50:1.44:464,0,1	0/0:18,0:18:29.69:0,30,423	0/0:13,0:12:23.75:0,24,258	0/0:33,0:33:63.43:0,63,777	0/0:11,0:11:18.01:0,18,203	0/0:17,0:17:34.37:0,34,367	0/0:17,0:17:38.37:0,38,347	0/0:7,0:7:17.76:0,18,139
chr10	19192186	.	A	ACACT	1219.07	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=-0.104;DP=580;FS=2.155;HRun=0;HaplotypeScore=106.0005;InbreedingCoeff=0.4391;MQ=62.42;MQ0=11;MQRankSum=0.477;QD=5.62;ReadPosRankSum=0.378;VQSLOD=2.0106;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:21,0:21:33.14:33,0,161	0/0:9,0:9:18.46:0,18,182	0/0:26,0:15:28.19:0,28,316	0/0:29,0:20:47.96:0,48,431	0/0:19,0:18:30.86:0,31,311	0/0:19,0:18:33.73:0,34,282	0/0:32,0:31:61.11:0,61,540	0/0:21,0:20:50.52:0,51,396	0/1:17,0:16:24.63:25,0,47	0/0:20,0:19:43.79:0,44,486	0/0:11,0:10:6.74:0,7,83	0/0:17,0:17:35.83:0,36,316	0/0:26,0:26:59.75:0,60,545	0/0:17,0:17:29.86:0,30,300	1/1:2,21:24:12.29:262,12,0	1/1:18,0:18:3.35:35,3,0	0/1:25,0:24:21.78:51,0,22	0/1:24,0:22:15.98:16,0,28	1/1:13,0:13:32.04:416,32,0	1/1:24,0:23:29.70:306,30,0	0/1:51,0:50:19.53:245,0,20	0/0:17,0:17:32.67:0,33,398	0/0:13,0:12:21.48:0,21,220	0/0:35,0:35:71.94:0,72,776	0/0:11,0:11:20.99:0,21,212	0/0:17,0:17:40.22:0,40,395	0/0:17,0:17:38.47:0,38,319	0/0:7,0:7:17.77:0,18,139
chr10	19192188	.	A	ACT	835.83	PASS	AB=0.908;AC=12;AF=0.214;AN=56;BaseQRankSum=2.156;DP=574;FS=2.823;HRun=0;HaplotypeScore=77.3560;InbreedingCoeff=0.4863;MQ=60.94;MQ0=14;MQRankSum=1.010;QD=4.22;ReadPosRankSum=1.695;VQSLOD=1.9474;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:11.17:0,11,176	0/0:9,0:9:19.22:0,19,168	0/0:25,0:14:32.62:0,33,323	0/0:28,0:19:47.95:0,48,431	0/0:20,0:19:17.02:0,17,291	0/1:20,0:19:0.17:0,0,229	0/0:30,0:29:25.82:0,26,513	0/0:20,0:18:50.77:0,51,408	0/0:17,0:16:8.11:0,8,76	0/0:20,0:19:52.87:0,53,504	0/0:11,0:10:10.12:0,10,98	0/0:17,0:17:38.83:0,39,330	0/0:25,0:25:59.84:0,60,526	0/0:17,0:17:38.85:0,39,351	1/1:21,1:22:12.29:161,12,0	1/1:17,0:17:1.11:3,1,0	0/1:26,0:25:20.96:46,0,21	0/1:24,0:22:11.95:20,0,12	1/1:13,0:12:14.56:318,15,0	1/1:23,0:22:38.90:318,39,0	0/1:22,30:52:62.12:123,0,62	0/0:17,0:17:32.80:0,33,354	0/0:13,0:12:0.01:0,0,158	0/0:33,0:33:77.93:0,78,756	0/0:11,0:11:20.99:0,21,196	0/0:16,0:16:47.52:0,48,430	0/0:18,0:17:38.65:0,39,293	0/0:8,0:8:20.89:0,21,160
chr10	19193284	.	CTTTA	C	14803.26	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=19.080;DP=751;FS=3.187;HRun=0;HaplotypeScore=128.3474;InbreedingCoeff=0.9782;MQ=69.79;MQ0=0;MQRankSum=-3.397;QD=45.97;ReadPosRankSum=2.957;VQSLOD=5.6952;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,40:44:99:2091,114,0	1/1:0,11:11:21.07:386,21,0	0/0:12,0:13:4.05:0,4,593	0/0:11,0:11:27.07:0,27,521	1/1:0,24:24:63.22:1156,63,0	0/0:21,0:21:57.18:0,57,1397	0/0:24,0:24:72.25:0,72,1870	1/1:2,29:31:87.26:1499,87,0	1/1:0,34:34:81.28:1484,81,0	1/1:1,44:45:99:2334,129,0	1/1:2,20:22:48.16:882,48,0	0/0:31,0:31:90.29:0,90,2273	1/1:0,29:30:69.23:1259,69,0	0/0:38,0:38:99:0,105,2659	0/0:34,0:34:96.31:0,96,2431	0/0:28,1:29:32.08:0,32,2077	0/0:24,0:24:72.23:0,72,1816	0/0:18,0:18:54.14:0,54,1245	0/0:15,0:15:36.11:0,36,895	0/0:27,0:27:78.27:0,78,2056	0/0:24,0:24:69.23:0,69,1769	0/0:27,0:27:72.23:0,72,1807	0/0:25,0:25:72.24:0,72,1780	0/0:27,0:27:75.26:0,75,1932	0/0:41,0:41:99:0,114,2903	1/1:2,36:38:99:1891,108,0	1/1:1,22:23:57.20:1049,57,0	1/1:2,18:20:42.14:773,42,0
chr10	19194713	.	T	TTTGAGACAGACCAATGGC	8168.62	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-0.937;DP=611;FS=0.000;HRun=0;HaplotypeScore=270.2687;InbreedingCoeff=0.9975;MQ=80.04;MQ0=0;MQRankSum=-8.651;QD=140.84;ReadPosRankSum=0.564;VQSLOD=4.2951;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,9:31:54.19:4347,54,0	0/0:11,0:11:30.10:0,30,1434	0/0:22,0:23:63.13:0,63,2320	0/0:17,0:17:21.87:0,22,856	0/0:30,0:30:84.27:0,84,3707	0/0:20,0:20:57.18:0,57,2593	0/0:18,0:18:54.18:0,54,2498	0/0:25,0:25:69.23:0,69,2762	1/1:8,10:26:51.18:3821,51,0	0/0:19,0:19:51.18:0,51,2539	0/0:10,0:10:30.09:0,30,1234	0/0:20,0:20:60.19:0,60,2533	0/0:27,0:27:75.24:0,75,3489	0/0:19,0:19:57.18:0,57,2668	0/0:31,0:31:93.31:0,93,4374	0/0:21,0:21:60.21:0,60,2892	0/0:38,0:38:99:0,108,4734	0/0:27,0:27:81.28:0,81,3806	0/0:12,0:12:36.12:0,36,1723	0/0:21,0:21:60.21:0,60,2777	0/0:22,0:22:66.18:0,66,3052	0/0:25,0:25:69.71:0,70,3386	0/0:20,0:20:56.98:0,57,2577	0/0:11,0:11:33.11:0,33,1613	0/0:29,0:29:87.30:0,87,4443	0/0:21,0:21:63.22:0,63,3190	0/0:24,0:24:72.21:0,72,3306	0/0:12,0:12:36.08:0,36,1654
chr10	19197179	.	CT	C	2643.77	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=3.678;DP=796;FS=0.961;HRun=1;HaplotypeScore=95.1674;InbreedingCoeff=0.9948;MQ=89.53;MQ0=0;MQRankSum=-4.152;QD=37.24;ReadPosRankSum=2.644;VQSLOD=3.9856;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,47:47:99:1885,135,0	0/0:8,0:8:24.08:0,24,384	0/0:31,0:31:63.12:0,63,1227	0/0:29,0:29:67.77:0,68,1181	0/0:23,0:23:63.17:0,63,938	0/0:26,0:26:78.27:0,78,1247	0/0:21,0:21:60.19:0,60,936	0/0:25,0:25:75.26:0,75,1199	1/1:0,24:24:63.21:881,63,0	0/0:36,0:36:99:0,99,1583	0/0:18,0:18:54.18:0,54,862	0/0:26,0:26:78.27:0,78,1246	0/0:33,0:33:99:0,99,1542	0/0:25,0:25:75.26:0,75,1194	0/0:40,0:40:99:0,120,1893	0/0:38,0:38:99:0,114,1800	0/0:35,0:35:98.84:0,99,1530	0/0:27,0:27:75.26:0,75,1199	0/0:28,0:28:84.29:0,84,1340	0/0:24,0:24:72.25:0,72,1149	0/0:43,0:43:99:0,129,2004	0/0:32,0:32:93.32:0,93,1487	0/0:19,0:19:54.17:0,54,837	0/0:40,0:40:99:0,120,1892	0/0:24,0:24:69.24:0,69,1098	0/0:31,1:32:51.37:0,51,1378	0/0:35,0:35:99:0,102,1631	0/0:7,0:7:18.06:0,18,288
chr10	19197527	.	T	TTTTG	7939.12	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-13.896;DP=821;FS=0.000;HRun=0;HaplotypeScore=123.6937;InbreedingCoeff=0.9999;MQ=67.66;MQ0=0;MQRankSum=-0.947;QD=44.60;ReadPosRankSum=0.952;VQSLOD=5.3816;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,108,1774	0/0:14,0:14:39.11:0,39,617	0/0:31,0:28:48.16:0,48,779	0/0:27,0:26:47.75:0,48,764	0/0:32,0:32:69.23:0,69,1142	0/0:28,0:28:63.22:0,63,1044	0/0:25,0:25:60.16:0,60,904	0/0:33,0:33:48.16:0,48,776	0/0:22,0:22:51.16:0,51,822	0/0:41,0:41:84.29:0,84,1394	0/0:24,0:24:54.18:0,54,899	0/0:26,0:26:69.22:0,69,1119	0/0:27,0:27:60.18:0,60,948	0/0:34,0:34:93.29:0,93,1478	0/0:39,0:38:93.32:0,93,1550	1/1:8,15:23:33.11:813,33,0	1/1:12,23:35:63.22:1553,63,0	1/1:5,18:23:54.19:1324,54,0	1/1:16,11:29:45.12:938,45,0	1/1:14,24:39:81.28:1913,81,0	1/1:6,21:28:57.20:1398,57,0	0/0:33,0:33:81.25:0,81,1299	0/0:26,0:26:66.23:0,66,1100	0/0:33,0:33:69.22:0,69,1126	0/0:29,0:29:75.25:0,75,1218	0/0:31,0:31:75.23:0,75,1168	0/0:26,0:26:63.22:0,63,1042	0/0:20,0:20:54.13:0,54,817
chr10	19200530	.	TTA	T	1555.13	PASS	AB=1.000;AC=17;AF=0.340;AN=50;BaseQRankSum=3.358;DP=278;FS=5.359;HRun=0;HaplotypeScore=49.4350;InbreedingCoeff=0.7677;MQ=78.61;MQ0=4;MQRankSum=-4.167;QD=14.40;ReadPosRankSum=0.437;VQSLOD=2.3622;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:4:9.03:0,9,150	1/1:3,2:5:9.03:112,9,0	0/0:15,0:10:0.93:0,1,106	0/1:31,0:13:0.23:0,0,65	1/1:5,4:9:18.06:225,18,0	0/0:14,0:14:30.10:0,30,488	./.	0/0:36,0:36:99:0,99,1584	0/0:7,0:7:9.03:0,9,146	1/1:5,5:10:15.05:189,15,0	1/1:1,2:3:6.02:76,6,0	0/0:4,0:4:3.01:0,3,38	1/1:3,5:8:15.05:189,15,0	0/0:6,0:6:12.04:0,12,199	0/0:7,0:7:12.04:0,12,199	0/0:6,0:6:18.06:0,18,299	0/0:13,0:13:30.10:0,30,498	0/0:11,0:11:24.08:0,24,392	0/0:20,0:20:36.12:0,36,599	0/0:6,0:6:6.02:0,6,100	0/0:3,0:3:3.01:0,3,50	./.	0/0:8,0:8:18.06:0,18,293	./.	0/0:7,0:7:12.04:0,12,200	1/1:11,6:17:30.06:339,30,0	1/1:7,10:17:30.10:378,30,0	1/1:1,6:7:18.06:226,18,0
chr10	19200560	.	C	CAT	5821.22	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=-6.760;DP=319;FS=1.729;HRun=0;HaplotypeScore=48.1203;InbreedingCoeff=0.7791;MQ=75.42;MQ0=5;MQRankSum=-1.682;QD=30.96;ReadPosRankSum=5.894;VQSLOD=6.0148;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:2,0:2:6.01:0,6,63	1/1:0,4:4:12.04:202,12,0	0/0:21,0:15:1.68:0,2,136	0/1:30,0:13:21.52:22,0,116	1/1:1,12:14:24.08:404,24,0	0/0:10,0:10:24.08:0,24,309	0/0:3,0:3:9.03:0,9,115	0/0:48,0:48:99:0,111,1392	0/0:4,0:4:9.03:0,9,116	1/1:1,11:12:33.11:553,33,0	1/1:1,4:6:6.02:101,6,0	0/0:6,0:6:15.03:0,15,178	1/1:2,6:8:15.05:253,15,0	0/0:7,0:7:18.03:0,18,214	0/0:6,0:6:15.03:0,15,178	1/1:0,10:10:30.10:504,30,0	1/1:1,17:19:33.11:556,33,0	1/1:1,14:15:33.11:557,33,0	1/1:1,19:20:57.19:957,57,0	1/1:0,5:5:12.04:202,12,0	1/1:0,2:2:3.01:51,3,0	0/0:3,0:3:9.01:0,9,100	0/0:6,0:6:15.05:0,15,193	0/0:1,0:1:3.01:0,3,39	0/0:11,0:11:30.08:0,30,371	1/1:1,8:9:20.64:353,21,0	1/1:4,10:14:21.07:348,21,0	1/1:4,15:19:45.15:758,45,0
chr10	19203664	.	AT	A	2932.83	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=4.001;DP=627;FS=11.690;HRun=10;HaplotypeScore=77.7787;InbreedingCoeff=0.9247;MQ=71.57;MQ0=1;MQRankSum=-0.410;QD=16.48;ReadPosRankSum=-0.188;VQSLOD=3.1627;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:50,2:53:92.09:0,92,1438	0/0:5,0:5:9.02:0,9,100	0/0:12,0:9:11.99:0,12,117	0/1:18,0:17:1.86:2,0,131	0/0:31,0:31:90.24:0,90,995	0/0:16,1:17:19.07:0,19,438	0/0:23,0:23:63.13:0,63,680	1/1:7,25:32:38.57:538,39,0	0/0:18,0:18:51.14:0,51,564	0/0:25,0:26:59.92:0,60,614	0/0:27,1:28:40.12:0,40,671	0/0:25,0:25:72.18:0,72,786	0/0:15,0:15:42.06:0,42,438	0/0:18,0:18:39.55:0,40,417	0/0:23,0:23:63.10:0,63,667	1/1:2,18:20:47.99:417,48,0	1/1:4,27:31:71.98:623,72,0	1/1:5,27:32:77.75:659,78,0	1/1:2,11:13:32.99:286,33,0	1/1:4,15:19:38.95:339,39,0	1/1:2,11:13:15.21:266,15,0	0/0:22,0:22:63.17:0,63,692	0/0:22,0:22:57.14:0,57,622	0/0:21,0:21:54.15:0,54,597	0/0:26,0:26:66.15:0,66,709	0/0:21,0:21:57.15:0,57,624	0/0:28,0:27:69.16:0,69,744	0/0:13,0:15:41.95:0,42,445
chr10	19203851	.	AGT	A	6538.08	PASS	AB=1.000;AC=28;AF=0.500;AN=56;BaseQRankSum=18.392;DP=774;FS=0.934;HRun=0;HaplotypeScore=135.6371;InbreedingCoeff=0.8471;MQ=74.76;MQ0=2;MQRankSum=-1.707;QD=15.83;ReadPosRankSum=2.239;VQSLOD=4.9693;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:96.30:0,96,1514	1/1:12,0:12:30.67:141,31,0	0/0:30,0:28:60.01:0,60,860	0/0:27,0:27:57.11:0,57,832	0/1:39,0:39:59.31:219,0,59	0/0:28,0:28:69.20:0,69,1075	0/0:33,0:33:42.66:0,43,985	1/1:11,16:27:48.11:570,48,0	0/0:27,0:27:63.18:0,63,984	0/1:32,0:32:32.23:168,0,32	1/1:24,0:24:49.91:224,50,0	0/0:24,0:24:57.18:0,57,918	1/1:28,0:28:14.63:233,15,0	0/0:21,0:21:51.15:0,51,785	0/0:33,0:33:87.26:0,87,1362	1/1:8,20:28:57.18:726,57,0	1/1:4,22:26:63.20:802,63,0	1/1:5,26:31:66.18:822,66,0	1/1:5,20:24:54.03:607,54,0	1/1:3,18:21:45.06:534,45,0	1/1:8,40:47:75.24:955,75,0	0/0:22,0:22:54.17:0,54,844	0/0:30,0:30:81.18:0,81,1248	0/0:23,0:23:60.17:0,60,961	0/0:25,0:25:75.23:0,75,1191	1/1:29,0:29:10.07:162,10,0	1/1:27,0:27:17.81:253,18,0	1/1:16,0:16:27.86:123,28,0
chr10	19203863	.	TGG	T	6894.97	PASS	AB=1.000;AC=25;AF=0.446;AN=56;BaseQRankSum=18.194;DP=731;FS=9.643;HRun=8;HaplotypeScore=132.2568;InbreedingCoeff=0.6331;MQ=71.49;MQ0=2;MQRankSum=-1.157;QD=17.77;ReadPosRankSum=6.930;VQSLOD=1.6228;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:96.22:0,96,1462	1/1:0,11:11:33.10:401,33,0	0/0:29,0:27:72.15:0,72,969	0/0:25,0:26:43.74:0,44,770	1/1:5,30:35:75.22:913,75,0	0/0:26,0:26:72.22:0,72,1143	0/0:27,0:27:63.20:0,63,1004	0/1:25,0:25:95.40:95,0,152	0/0:26,0:26:72.14:0,72,1039	1/1:5,28:33:87.18:996,87,0	1/1:0,19:19:54.17:657,54,0	0/0:20,0:20:57.19:0,57,940	1/1:3,27:30:63.18:754,63,0	0/0:19,0:19:48.15:0,48,770	0/0:31,0:31:84.27:0,84,1373	0/1:26,0:26:67.91:148,0,68	1/1:25,0:25:11.50:211,11,0	0/1:32,0:32:56.92:177,0,57	0/1:24,0:23:52.57:107,0,53	1/1:18,0:18:35.96:165,36,0	0/1:46,0:45:58.31:204,0,58	0/0:21,0:21:60.17:0,60,931	0/0:33,0:33:87.24:0,87,1324	0/0:23,0:23:66.19:0,66,1019	0/0:27,0:27:75.21:0,75,1206	1/1:3,26:29:78.20:914,78,0	1/1:1,24:25:21.50:788,22,0	1/1:0,10:10:30.09:365,30,0
chr10	19204529	.	C	CTAAGA	12865.15	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-1.298;DP=674;FS=0.000;HRun=0;HaplotypeScore=128.1468;InbreedingCoeff=0.9969;MQ=86.20;MQ0=0;MQRankSum=-15.229;QD=74.37;ReadPosRankSum=-3.006;VQSLOD=5.3759;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,123,2542	0/0:5,0:5:15.05:0,15,315	0/0:28,0:28:72.25:0,72,1457	0/0:24,0:24:58.51:0,59,1209	0/0:21,0:21:63.20:0,63,1283	0/0:17,0:17:51.18:0,51,1070	0/0:27,0:27:78.25:0,78,1599	1/1:8,26:35:99:2969,99,0	0/0:28,0:28:84.25:0,84,1685	0/0:23,0:23:63.20:0,63,1250	0/0:16,0:16:45.13:0,45,846	0/0:29,0:29:84.27:0,84,1698	0/0:31,0:31:87.30:0,87,1826	0/0:33,0:33:96.31:0,96,1975	0/0:31,0:31:87.28:0,87,1788	1/1:5,30:38:99:3057,99,0	1/1:5,14:19:45.15:1392,45,0	1/1:4,15:21:48.16:1475,48,0	1/1:6,6:14:39.10:1031,39,0	1/1:7,14:21:57.19:1659,57,0	1/1:6,18:25:45.15:1283,45,0	0/0:30,0:30:87.30:0,87,1823	0/0:20,0:20:57.20:0,57,1197	0/0:19,0:19:54.17:0,54,1096	0/0:23,0:23:66.23:0,66,1386	0/0:17,0:17:48.16:0,48,1008	0/0:28,0:28:84.25:0,84,1705	0/0:9,0:9:27.09:0,27,567
chr10	19205144	.	AAG	A	1018.62	PASS	AB=0.974;AC=27;AF=0.482;AN=56;BaseQRankSum=6.074;DP=492;FS=45.298;HRun=0;HaplotypeScore=126.6942;InbreedingCoeff=-0.1075;MQ=52.87;MQ0=13;MQRankSum=-7.297;QD=2.69;ReadPosRankSum=6.939;VQSLOD=0.4724;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,1:25:3.68:0,4,284	0/1:7,0:6:7.76:40,0,8	0/1:26,0:8:1.06:1,0,61	0/0:19,0:13:11.19:0,11,61	1/1:35,1:34:50.60:317,51,0	0/1:12,0:12:8.09:44,0,8	0/1:10,2:12:38.44:38,0,88	0/0:25,0:23:56.41:0,56,389	0/1:11,0:9:6.64:7,0,75	1/1:19,0:19:2.87:83,3,0	1/1:22,0:21:23.19:162,23,0	0/1:6,0:6:0.52:1,0,30	0/1:18,0:18:25.39:26,0,25	0/1:14,1:14:2.63:3,0,111	0/0:15,0:15:29.94:0,30,286	0/0:13,1:13:2.13:0,2,114	0/1:23,0:22:13.98:14,0,169	0/1:22,1:22:7.79:8,0,198	0/1:17,1:16:16.99:17,0,139	0/1:22,1:23:25.50:26,0,193	0/1:6,0:5:0.54:1,0,42	0/0:12,0:12:14.32:0,14,148	0/1:15,0:13:1.74:2,0,101	0/1:14,1:15:35.90:36,0,84	0/1:20,1:21:5.94:6,0,162	1/1:22,0:22:33.52:230,34,0	0/1:20,0:19:22.01:62,0,22	1/1:8,0:8:6.58:55,7,0
chr10	19205148	.	AAG	A	4247.93	PASS	AB=0.964;AC=18;AF=0.321;AN=56;BaseQRankSum=-1.564;DP=489;FS=14.663;HRun=0;HaplotypeScore=120.0491;InbreedingCoeff=0.8592;MQ=54.00;MQ0=8;MQRankSum=-4.472;QD=26.55;ReadPosRankSum=2.584;VQSLOD=5.2490;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:50.18:0,50,800	1/1:2,4:5:13.86:180,14,0	0/0:27,0:9:25.83:0,26,312	0/0:19,0:13:6.35:0,6,67	1/1:15,16:30:69.61:822,70,0	0/1:12,0:13:3.48:3,0,261	0/0:13,0:13:18.08:0,18,408	0/0:27,0:25:59.35:0,59,705	0/0:12,0:11:24.39:0,24,338	1/1:9,10:19:10.30:587,10,0	1/1:8,13:20:57.18:812,57,0	0/0:7,0:7:18.06:0,18,288	1/1:9,7:16:28.96:394,29,0	0/0:16,0:16:38.75:0,39,572	0/0:14,0:14:36.12:0,36,659	0/0:13,0:13:27.62:0,28,319	0/0:21,2:22:33.98:0,34,469	0/0:23,0:22:28.41:0,28,430	0/0:16,0:14:13.28:0,13,256	0/0:23,0:23:25.50:0,26,371	0/1:6,0:5:1.52:2,0,65	0/0:13,0:13:39.08:0,39,636	0/0:16,0:14:33.09:0,33,493	0/0:16,0:15:32.69:0,33,392	0/0:21,0:21:39.99:0,40,676	1/1:10,11:21:59.20:699,59,0	1/1:12,7:18:35.79:454,36,0	1/1:4,4:8:21.07:296,21,0
chr10	19205149	.	AG	A	1575.14	PASS	AB=0.857;AC=15;AF=0.268;AN=56;BaseQRankSum=4.205;DP=479;FS=8.275;HRun=1;HaplotypeScore=120.7616;InbreedingCoeff=0.8642;MQ=55.00;MQ0=7;MQRankSum=-6.432;QD=11.93;ReadPosRankSum=2.632;VQSLOD=1.9411;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:49.36:0,49,713	0/1:5,1:5:2.02:52,0,2	0/0:28,0:10:20.86:0,21,250	0/0:20,0:13:13.42:0,13,97	1/1:29,1:29:65.87:402,66,0	0/0:13,0:13:7.63:0,8,300	0/0:13,0:13:27.45:0,27,376	0/0:27,0:25:58.48:0,58,741	0/0:11,0:10:3.60:0,4,248	1/1:18,0:18:27.89:246,28,0	1/1:19,2:20:52.75:283,53,0	0/0:7,0:7:18.06:0,18,268	1/1:12,0:12:27.62:133,28,0	0/0:16,0:16:41.66:0,42,544	0/0:14,0:14:36.12:0,36,560	0/0:13,0:13:27.67:0,28,308	0/0:22,0:21:38.82:0,39,507	0/0:22,0:21:24.77:0,25,490	0/0:18,0:17:26.27:0,26,303	0/0:22,0:22:35.68:0,36,442	0/0:6,0:5:1.45:0,1,75	0/0:13,0:13:39.08:0,39,570	0/0:16,0:14:33.11:0,33,493	0/0:15,1:15:33.15:0,33,355	0/0:20,0:20:43.03:0,43,635	1/1:19,2:21:43.45:311,43,0	1/1:15,1:15:33.81:223,34,0	1/1:8,0:8:21.70:121,22,0
chr10	19205154	.	CTGT	C	3815.93	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-5.032;DP=472;FS=15.194;HRun=0;HaplotypeScore=126.6308;InbreedingCoeff=0.9224;MQ=58.52;MQ0=6;MQRankSum=-4.070;QD=32.61;ReadPosRankSum=-0.460;VQSLOD=3.1127;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:26:62.23:0,62,1043	0/0:8,0:7:13.63:0,14,111	0/0:31,0:13:22.91:0,23,415	0/0:20,0:13:6.79:0,7,147	0/0:29,0:28:0.58:0,1,162	0/0:13,0:13:18.80:0,19,224	0/0:13,0:13:20.57:0,21,251	1/1:4,19:23:60.03:923,60,0	0/0:12,0:11:28.45:0,28,536	0/0:20,0:20:18.79:0,19,411	0/0:22,0:21:17.06:0,17,293	0/0:7,0:7:18.03:0,18,186	0/0:12,0:12:28.27:0,28,192	0/0:17,0:17:28.17:0,28,369	0/0:14,0:14:39.01:0,39,622	1/1:5,5:10:26.18:297,26,0	1/1:7,13:19:40.52:576,41,0	1/1:4,16:20:45.64:647,46,0	1/1:6,10:15:38.66:552,39,0	1/1:6,15:22:46.48:648,46,0	1/1:1,3:4:11.96:172,12,0	0/0:14,0:14:42.03:0,42,398	0/0:16,0:14:33.06:0,33,354	0/0:14,0:13:34.69:0,35,301	0/0:18,0:18:33.74:0,34,376	0/0:22,0:23:37.17:0,37,411	0/0:17,0:16:19.29:0,19,199	0/0:8,0:8:22.40:0,22,192
chr10	19206205	.	T	TGACTCAGGTCACCAG	40749.49	PASS	AB=0.613;AC=29;AF=0.518;AN=56;BaseQRankSum=-6.169;DP=721;FS=5.350;HRun=0;HaplotypeScore=256.1413;InbreedingCoeff=0.8876;MQ=79.24;MQ0=0;MQRankSum=-17.202;QD=108.38;ReadPosRankSum=-0.683;VQSLOD=3.6930;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,126,4990	1/1:4,10:15:33.11:2404,33,0	0/0:31,0:31:75.25:0,75,2441	0/0:26,0:27:38.36:0,38,1572	1/1:9,9:27:21.07:1188,21,0	0/0:24,0:24:69.24:0,69,2820	0/0:28,0:28:69.22:0,69,2669	1/1:37,0:37:96.32:4868,96,0	0/0:20,0:20:57.20:0,57,2375	1/1:12,16:40:99:5694,99,0	1/1:7,7:21:15.05:511,15,0	0/0:30,0:30:78.24:0,78,2956	1/1:4,15:27:4.23:3378,4,0	0/0:30,0:30:81.28:0,81,3372	0/0:23,0:23:66.23:0,66,2828	0/1:14,19:38:38.81:5024,0,39	1/1:6,4:17:21.07:1362,21,0	1/1:6,3:10:15.05:1053,15,0	1/1:13,4:24:57.18:2919,57,0	1/1:9,11:28:36.12:2465,36,0	1/1:12,2:23:9.03:367,9,0	0/0:13,0:13:36.11:0,36,1442	0/0:19,0:19:51.17:0,51,1852	0/0:26,0:26:57.99:0,58,2731	0/0:26,0:26:69.24:0,69,2912	1/1:9,12:31:84.28:5110,84,0	1/1:8,11:31:54.53:3767,55,0	1/1:1,4:7:9.03:641,9,0
chr10	19206992	.	AT	A	4563.26	PASS	AB=0.770;AC=46;AF=0.821;AN=56;BaseQRankSum=7.777;DP=468;FS=3.320;HRun=11;HaplotypeScore=69.2626;InbreedingCoeff=0.6973;MQ=66.49;MQ0=14;MQRankSum=-2.732;QD=11.47;ReadPosRankSum=3.724;VQSLOD=4.6875;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:63.13:0,63,655	1/1:1,0:9:14.26:41,14,0	0/1:12,1:9:9.66:10,0,97	0/0:6,1:5:5.60:0,6,41	1/1:2,0:20:28.51:82,29,0	1/1:6,16:22:16.05:338,16,0	1/1:4,15:16:32.96:271,33,0	1/1:6,19:24:56.88:462,57,0	0/0:11,0:12:23.89:0,24,238	1/1:2,0:17:25.32:73,25,0	1/1:1,0:12:20.36:59,20,0	0/1:4,7:11:8.01:148,0,8	1/1:5,0:14:18.33:53,18,0	1/1:6,17:22:15.82:328,16,0	0/0:21,1:21:26.47:0,26,480	1/1:2,11:13:3.97:239,4,0	1/1:4,18:21:47.94:394,48,0	1/1:2,12:15:34.99:277,35,0	1/1:9,20:28:55.89:441,56,0	1/1:8,11:16:29.44:231,29,0	1/1:2,5:6:11.99:99,12,0	1/1:3,8:11:23.97:197,24,0	1/1:0,5:5:11.99:99,12,0	1/1:4,11:15:29.94:246,30,0	1/1:4,10:12:26.95:222,27,0	1/1:5,0:30:28.17:121,28,0	1/1:6,0:20:30.55:88,31,0	1/1:0,0:9:15.86:45,16,0
chr10	19207256	.	GTGA	G	948.76	PASS	AB=1.000;AC=12;AF=0.214;AN=56;BaseQRankSum=-0.365;DP=281;FS=13.898;HRun=0;HaplotypeScore=50.9931;InbreedingCoeff=0.4022;MQ=82.45;MQ0=12;MQRankSum=-3.324;QD=13.18;ReadPosRankSum=-0.436;VQSLOD=1.7136;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:29.23:0,29,244	1/1:4,0:4:1.25:3,1,0	0/0:22,0:11:32.96:0,33,319	0/0:19,0:16:35.11:0,35,365	0/0:7,0:7:17.78:0,18,124	0/0:11,0:10:12.35:0,12,132	0/0:15,0:14:32.97:0,33,317	1/1:13,0:13:38.95:337,39,0	0/0:8,0:8:6.49:0,6,95	0/0:13,0:13:31.97:0,32,275	0/0:8,0:8:9.73:0,10,87	0/0:9,0:9:26.58:0,27,252	0/0:13,0:12:7.93:0,8,90	0/0:7,0:7:20.94:0,21,168	0/0:10,0:10:21:0,21,258	0/1:3,0:3:20.70:36,0,21	0/1:11,0:11:65.03:130,0,65	0/1:5,0:4:34.95:35,0,49	1/1:3,4:7:17.94:146,18,0	1/1:5,0:5:14.97:120,15,0	0/1:24,0:23:42.80:301,0,43	0/0:2,0:2:3:0,3,25	0/0:3,0:3:9:0,9,101	0/0:12,0:12:32.34:0,32,260	0/0:7,0:6:14.97:0,15,142	0/0:12,0:11:19.45:0,19,134	0/0:12,0:12:8.63:0,9,103	0/0:6,0:6:2.13:0,2,20
chr10	19207259	.	ATGGTGGTGGTGGTGGTGG	A	1503.98	PASS	AC=16;AF=0.308;AN=52;BaseQRankSum=4.741;DP=272;FS=1.266;HRun=0;HaplotypeScore=118.9460;InbreedingCoeff=0.5941;MQ=78.63;MQ0=13;MQRankSum=-4.202;QD=20.32;ReadPosRankSum=0.242;VQSLOD=2.5361;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:12:9.03:0,9,312	1/1:0,3:3:3.01:145,3,0	0/0:21,0:10:2.97:0,3,20	./.	1/1:4,3:7:6.02:166,6,0	0/0:11,0:10:15.03:0,15,700	0/0:13,0:12:13.60:0,14,876	0/0:12,0:12:3.01:0,3,128	0/0:6,0:9:15.05:0,15,587	1/1:11,1:12:3.01:145,3,0	1/1:6,2:8:3.01:145,3,0	0/0:8,0:9:6.02:0,6,464	1/1:9,5:13:9.03:436,9,0	0/0:8,0:8:12.03:0,12,496	0/0:8,0:8:12.04:0,12,873	0/0:3,0:3:6.02:0,6,330	0/0:9,0:9:12.04:0,12,850	0/0:6,0:5:9.03:0,9,686	0/0:7,0:6:3.01:0,3,155	0/0:5,0:5:3.01:0,3,96	0/0:25,0:24:27.09:0,27,1721	./.	0/0:3,0:3:6.02:0,6,350	0/0:10,0:12:12.03:0,12,453	0/0:5,0:6:9.03:0,9,351	1/1:7,6:12:9.19:187,9,0	1/1:5,7:12:5.16:289,5,0	1/1:2,3:5:3.01:145,3,0
chr10	19209351	.	A	ACTTCT	13752.12	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-10.487;DP=767;FS=1.436;HRun=0;HaplotypeScore=143.6304;InbreedingCoeff=0.9974;MQ=85.46;MQ0=0;MQRankSum=-9.689;QD=71.63;ReadPosRankSum=-2.620;VQSLOD=5.5888;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,129,2656	1/1:2,10:12:33.11:939,33,0	0/0:22,0:22:48.16:0,48,905	0/0:29,0:29:66.23:0,66,1327	1/1:4,14:19:32.95:918,33,0	0/0:19,0:19:54.19:0,54,1117	0/0:37,0:37:99:0,108,2073	1/1:13,13:26:60.18:1656,60,0	0/0:30,0:30:81.25:0,81,1604	1/1:6,23:30:87.30:2558,87,0	1/1:3,10:14:36.12:956,36,0	0/0:38,0:38:99:0,105,2109	1/1:11,25:36:84.24:2389,84,0	0/0:33,0:33:84.29:0,84,1724	0/0:41,0:41:99:0,111,2196	0/0:30,0:30:90.31:0,90,1847	0/0:25,0:25:72.23:0,72,1433	0/0:23,0:23:63.22:0,63,1305	0/0:26,0:26:75.25:0,75,1520	0/0:17,0:17:48.16:0,48,995	0/0:54,0:54:99:0,154,3099	0/0:20,0:20:54.18:0,54,1063	0/0:18,0:18:51.13:0,51,979	0/0:39,0:39:96.33:0,96,1989	0/0:26,0:26:69.24:0,69,1430	1/1:2,21:25:72.23:2031,72,0	1/1:5,17:24:62.98:1845,63,0	1/1:0,5:6:15.05:461,15,0
chr10	19211058	.	CT	C	972.09	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.644;DP=783;FS=9.086;HRun=1;HaplotypeScore=81.0112;InbreedingCoeff=0.9997;MQ=83.70;MQ0=0;MQRankSum=-0.368;QD=37.39;ReadPosRankSum=-3.664;VQSLOD=2.0075;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:61,0:60:99:0,184,2892	0/0:13,0:13:39.12:0,39,600	0/0:26,1:25:62.29:0,62,989	0/0:27,0:27:49.41:0,49,833	0/0:28,0:28:81.25:0,81,1247	0/0:27,0:27:81.25:0,81,1248	0/0:30,0:30:90.27:0,90,1387	1/1:0,26:26:78.25:1067,78,0	0/0:33,0:33:99:0,99,1575	0/0:26,0:25:78.26:0,78,1211	0/0:24,0:24:72.23:0,72,1127	0/0:39,0:39:99:0,114,1727	0/0:25,0:25:72.21:0,72,1102	0/0:23,0:23:69.18:0,69,1006	0/0:39,0:39:99:0,114,1772	0/0:28,0:28:84.22:0,84,1263	0/0:29,0:29:87.30:0,87,1387	0/0:18,0:18:54.18:0,54,863	0/0:24,0:24:72.24:0,72,1128	0/0:18,0:18:54.17:0,54,836	0/0:37,0:37:99:0,111,1727	0/0:19,0:19:57.18:0,57,886	0/0:27,0:27:78.27:0,78,1237	0/0:35,0:35:99:0,105,1645	0/0:21,0:21:63.20:0,63,982	0/0:28,0:28:81.28:0,81,1295	0/0:40,0:40:99:0,120,1869	0/0:11,0:11:33.11:0,33,527
chr10	19212405	.	GTGTACA	G	12954.04	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=16.704;DP=754;FS=13.394;HRun=0;HaplotypeScore=277.0690;InbreedingCoeff=0.9653;MQ=49.21;MQ0=9;MQRankSum=-16.709;QD=39.02;ReadPosRankSum=-4.653;VQSLOD=2.8186;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:10,8:18:30.07:574,30,0	1/1:8,9:17:30.07:624,30,0	0/0:27,0:15:15.74:0,16,1116	0/0:21,0:11:23.52:0,24,541	1/1:15,40:55:81.05:1657,81,0	0/0:22,0:22:51.18:0,51,1793	0/0:19,0:19:51.17:0,51,1719	1/1:13,0:12:23.69:156,24,0	1/1:11,12:21:36.04:689,36,0	1/1:18,35:53:99:2967,153,0	1/1:13,22:35:39.04:856,39,0	0/0:22,0:22:54.19:0,54,1818	1/1:14,14:28:51.11:1057,51,0	0/0:33,0:33:84.27:0,84,2747	0/0:37,0:37:99:0,108,3484	0/0:32,0:32:69.07:0,69,2225	0/0:19,0:19:42.14:0,42,1344	0/0:30,0:30:1.36:0,1,1834	0/0:19,0:17:51.14:0,51,1376	0/0:23,0:23:57.20:0,57,1886	0/0:21,0:21:48.15:0,48,1532	0/0:29,0:29:75.26:0,75,2595	0/0:23,0:23:54.17:0,54,1687	0/0:25,0:25:56.95:0,57,1654	0/0:20,0:20:45.14:0,45,1323	1/1:16,26:41:99:2214,120,0	1/1:18,19:37:89.95:1672,90,0	1/1:4,6:10:21.07:487,21,0
chr10	19212407	.	GTACA	G	6765.47	PASS	AB=0.968;AC=23;AF=0.411;AN=56;BaseQRankSum=18.757;DP=749;FS=14.717;HRun=0;HaplotypeScore=275.6553;InbreedingCoeff=0.9366;MQ=49.13;MQ0=9;MQRankSum=-18.166;QD=18.95;ReadPosRankSum=-3.072;VQSLOD=2.7522;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:15,1:17:24.07:288,24,0	1/1:14,2:16:24.07:280,24,0	0/0:25,0:15:20.18:0,20,771	0/0:20,0:9:20.32:0,20,326	1/1:52,3:55:71.55:710,72,0	0/0:21,0:21:54.19:0,54,1450	0/0:20,0:20:51.13:0,51,1244	1/1:14,0:12:23.69:156,24,0	1/1:20,2:20:30.03:327,30,0	1/1:50,3:52:99:1617,145,0	1/1:32,3:35:38.53:377,39,0	0/0:22,0:22:54.17:0,54,1350	1/1:24,4:28:48.09:532,48,0	0/0:36,0:36:93.28:0,93,2282	0/0:36,0:36:99:0,108,2744	0/0:31,0:31:66.08:0,66,1611	0/0:19,0:19:41.74:0,42,989	0/1:29,0:30:6.51:7,0,1402	0/0:19,0:17:42.12:0,42,968	0/0:23,0:23:57.18:0,57,1465	0/0:21,0:21:48.16:0,48,1252	0/0:31,0:31:81.26:0,81,2112	0/0:23,0:23:50.90:0,51,1201	0/0:24,0:24:54.11:0,54,1175	0/0:19,0:19:42.11:0,42,1002	1/1:40,2:41:99:1284,120,0	1/1:34,2:36:89.76:922,90,0	1/1:8,1:9:21.06:266,21,0
chr10	19212423	.	TTG	T	1348.22	PASS	AB=0.833;AC=17;AF=0.304;AN=56;BaseQRankSum=16.871;DP=780;FS=0.375;HRun=0;HaplotypeScore=326.6219;InbreedingCoeff=0.7485;MQ=48.97;MQ0=4;MQRankSum=-15.373;QD=3.89;ReadPosRankSum=-5.480;VQSLOD=1.2136;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:18,3:21:7.60:54,8,0	1/1:13,6:19:27.28:118,27,0	0/0:14,0:8:17.81:0,18,158	0/0:10,0:6:11.24:0,11,124	1/1:43,14:57:48.49:175,48,0	0/0:24,0:24:54.12:0,54,829	0/0:21,0:21:36.12:0,36,606	0/0:27,0:25:38.23:0,38,268	1/1:19,6:23:29.05:115,29,0	0/1:46,10:55:99:275,0,241	1/1:31,9:40:35.98:127,36,0	0/0:21,0:21:42.11:0,42,657	0/1:22,9:31:1.07:158,0,1	0/0:33,0:33:81.18:0,81,1239	0/0:35,0:35:99:0,99,1590	0/0:32,0:32:72.21:0,72,1167	0/0:24,0:24:44.15:0,44,667	0/0:27,0:27:58.16:0,58,871	0/0:14,0:14:39.10:0,39,583	0/0:28,0:28:81.23:0,81,1263	0/0:24,0:24:54.13:0,54,843	0/0:33,0:33:87.19:0,87,1405	0/0:21,0:21:39.13:0,39,672	0/0:21,0:21:35.76:0,36,544	0/0:24,0:24:57.19:0,57,985	0/1:36,6:41:99:161,0,168	1/1:33,13:46:14.43:317,14,0	1/1:8,2:10:7.19:46,7,0
chr10	19212437	.	ATG	A	10509.26	PASS	AB=0.830;AC=22;AF=0.393;AN=56;BaseQRankSum=13.838;DP=817;FS=4.901;HRun=0;HaplotypeScore=327.7116;InbreedingCoeff=0.8701;MQ=49.23;MQ0=3;MQRankSum=-15.157;QD=24.05;ReadPosRankSum=-2.201;VQSLOD=4.0252;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,14:22:30.05:372,30,0	1/1:5,14:19:51.11:586,51,0	0/0:13,0:6:6.78:0,7,39	0/1:8,1:6:0.76:1,0,107	1/1:11,48:59:89.58:1056,90,0	0/0:20,0:20:48.13:0,48,755	0/0:21,0:21:24.02:0,24,377	0/1:39,18:53:99:933,0,232	1/1:4,23:25:57.11:686,57,0	1/1:13,45:57:99:1806,153,0	1/1:4,35:39:50.96:602,51,0	0/0:17,0:17:42.13:0,42,675	1/1:9,24:33:78.20:927,78,0	0/0:27,0:27:60.21:0,60,1014	0/0:34,0:34:90.24:0,90,1395	0/0:34,0:34:69.17:0,69,1061	0/0:23,0:23:38.92:0,39,574	0/0:26,0:26:46.97:0,47,736	0/0:12,0:12:33.07:0,33,459	0/0:30,0:30:90.23:0,90,1365	0/0:22,0:22:48.16:0,48,809	0/0:31,0:31:78.25:0,78,1286	0/0:22,0:22:45.10:0,45,678	0/0:21,0:21:29.75:0,30,455	0/0:27,0:27:60.18:0,60,967	1/1:9,35:43:99:1401,117,0	1/1:13,44:57:99:1867,159,0	1/1:5,8:13:24.50:273,24,0
chr10	19212491	.	A	ATATC	2310.94	PASS	AB=0.865;AC=10;AF=0.179;AN=56;BaseQRankSum=13.345;DP=768;FS=5.814;HRun=0;HaplotypeScore=339.2453;InbreedingCoeff=-0.2226;MQ=51.79;MQ0=7;MQRankSum=-13.906;QD=6.90;ReadPosRankSum=-10.962;VQSLOD=-0.4718;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:19,2:21:43.66:44,0,385	0/1:18,4:22:90.16:90,0,731	0/0:25,0:12:29.97:0,30,513	0/0:9,0:3:6.45:0,6,78	0/1:36,3:39:45.48:45,0,1043	0/0:25,0:25:69.22:0,69,1321	0/0:17,0:17:27.02:0,27,482	0/0:48,0:46:99:0,117,2017	0/1:28,4:32:99:112,0,971	0/1:39,9:45:99:600,0,1526	0/1:19,10:29:99:232,0,318	0/0:20,0:20:45.15:0,45,894	0/1:26,6:32:99:177,0,873	0/0:25,0:25:69.15:0,69,1347	0/0:31,0:31:87.30:0,87,1641	0/0:36,0:36:87.02:0,87,1644	0/0:23,0:23:51.17:0,51,984	0/0:27,0:27:63.18:0,63,1105	0/0:9,0:7:21.07:0,21,407	0/0:33,0:33:87.28:0,87,1668	0/0:19,0:19:51.16:0,51,953	0/0:18,0:18:51.17:0,51,978	0/0:21,0:21:57.09:0,57,1097	0/0:23,0:23:39.11:0,39,696	0/0:23,0:23:60.18:0,60,1113	0/1:45,2:47:99:266,0,1839	0/1:42,11:53:99:754,0,1289	0/1:10,2:12:99:136,0,385
chr10	19212542	.	G	GTA	6867.42	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-0.827;DP=601;FS=1.165;HRun=0;HaplotypeScore=137.1876;InbreedingCoeff=0.9531;MQ=55.89;MQ0=4;MQRankSum=-1.272;QD=30.66;ReadPosRankSum=2.831;VQSLOD=6.6095;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,0:17:36.09:402,36,0	1/1:4,9:13:30.08:457,30,0	0/0:3,0:2:3.01:0,3,37	0/0:5,0:3:5.95:0,6,58	1/1:5,23:27:57.17:908,57,0	0/0:29,0:29:52.03:0,52,891	0/0:12,0:12:24.01:0,24,253	0/0:43,0:43:99:0,102,1150	1/1:8,1:31:58.38:626,58,0	1/1:3,22:24:62.95:1009,63,0	1/1:5,19:24:57.19:965,57,0	0/0:20,0:20:39.09:0,39,474	1/1:7,15:22:24.08:411,24,0	0/0:21,0:21:48.12:0,48,599	0/0:23,0:23:66.18:0,66,834	0/0:40,0:40:87.21:0,87,1077	0/0:22,0:22:48.02:0,48,554	0/0:22,0:22:45.07:0,45,548	0/0:17,0:17:42.10:0,42,501	0/0:37,0:37:99:0,99,1175	0/0:14,0:14:30.06:0,30,361	0/0:10,0:10:24.05:0,24,286	0/0:19,0:19:51.15:0,51,646	0/0:18,0:18:33.07:0,33,431	0/0:22,0:22:48.11:0,48,585	1/1:11,24:34:81.21:1294,81,0	1/1:17,5:22:44.97:598,45,0	1/1:3,2:5:12.04:198,12,0
chr10	19213941	.	C	CG	1435.58	PASS	AB=0.773;AC=17;AF=0.304;AN=56;BaseQRankSum=11.784;DP=633;FS=4.727;HRun=2;HaplotypeScore=82.6308;InbreedingCoeff=0.6046;MQ=81.89;MQ0=0;MQRankSum=-5.908;QD=10.96;ReadPosRankSum=-1.040;VQSLOD=1.4128;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,17:22:29.93:323,30,0	1/1:1,1:2:4.35:16,4,0	0/0:12,0:12:29.46:0,29,372	0/0:24,0:24:66.11:0,66,858	0/1:9,0:9:8.09:8,0,47	0/0:18,0:18:51.17:0,51,712	0/0:40,0:39:99:0,111,1550	1/1:0,1:5:8.49:45,8,0	1/1:2,23:25:23.32:381,23,0	0/1:7,3:12:29.58:101,0,30	0/1:4,1:6:3.11:3,0,22	0/0:37,0:37:99:0,111,1550	0/1:3,11:15:31.65:183,0,32	0/0:41,0:41:99:0,120,1660	0/0:39,0:39:99:0,117,1618	0/0:36,0:36:99:0,105,1452	0/0:38,0:38:99:0,114,1593	0/0:30,0:30:87.29:0,87,1215	0/0:17,0:16:51.15:0,51,676	0/0:10,0:10:30.10:0,30,419	0/0:69,0:69:99:0,199,2751	0/0:15,0:15:39.13:0,39,544	0/0:15,0:15:45.15:0,45,626	0/0:41,0:41:99:0,123,1717	0/0:20,0:20:60.20:0,60,836	0/1:2,7:12:2.54:128,0,3	1/1:0,16:16:24.06:256,24,0	1/1:0,6:7:16.98:177,17,0
chr10	19214006	.	A	ATCGCT	598.79	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-0.525;DP=676;FS=6.575;HRun=0;HaplotypeScore=140.5643;InbreedingCoeff=0.9740;MQ=79.64;MQ0=0;MQRankSum=-1.612;QD=28.51;ReadPosRankSum=-3.510;VQSLOD=2.4834;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:69.24:0,69,1390	0/0:9,0:9:24.08:0,24,451	0/0:17,0:17:21.37:0,21,553	0/0:15,0:15:25.86:0,26,422	0/0:13,0:13:39.11:0,39,754	0/0:15,0:15:45.15:0,45,914	0/0:51,0:51:99:0,138,2608	1/1:10,10:21:30.09:693,30,0	0/0:33,0:33:78.24:0,78,1474	0/0:12,0:12:36.10:0,36,662	0/0:8,0:8:24.06:0,24,416	0/0:36,0:36:99:0,99,1846	0/0:25,0:25:63.19:0,63,1218	0/0:42,0:42:99:0,111,2250	0/0:32,0:32:87.27:0,87,1694	0/0:31,0:31:81.23:0,81,1545	0/0:31,0:31:81.26:0,81,1554	0/0:39,0:39:99:0,111,2096	0/0:26,0:26:68.88:0,69,1251	0/0:17,0:17:51.18:0,51,1034	0/0:48,0:48:99:0,129,2485	0/0:16,0:16:48.16:0,48,948	0/0:11,0:11:27.08:0,27,502	0/0:37,0:37:99:0,102,2071	0/0:18,0:18:51.18:0,51,1025	0/0:22,0:22:63.22:0,63,1279	0/0:16,0:16:45.15:0,45,876	0/0:8,0:8:15.05:0,15,304
chr10	19217487	.	A	AAGAG	20054.49	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-4.385;DP=762;FS=14.726;HRun=0;HaplotypeScore=127.6125;InbreedingCoeff=0.9666;MQ=72.94;MQ0=9;MQRankSum=-3.170;QD=30.20;ReadPosRankSum=7.532;VQSLOD=3.0675;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,0:41:44.74:240,45,0	1/1:3,0:11:21.71:95,22,0	0/0:38,0:28:26.51:0,27,517	0/0:32,0:24:21.16:0,21,208	1/1:6,0:33:61.51:277,62,0	1/1:1,17:19:23.82:532,24,0	1/1:6,25:32:57.20:1397,57,0	0/0:25,0:26:41.66:0,42,795	1/1:5,0:26:41.30:186,41,0	1/1:5,0:28:55.14:258,55,0	1/1:2,0:19:29.61:141,30,0	1/1:5,27:33:66.23:1633,66,0	1/1:12,0:36:26.89:205,27,0	1/1:6,19:27:42.14:1040,42,0	1/1:9,22:32:57.20:1412,57,0	1/1:7,24:32:68.97:1635,69,0	1/1:6,19:27:54.19:1304,54,0	1/1:9,23:33:64.20:1502,64,0	1/1:7,14:24:52.62:1021,53,0	1/1:5,18:25:54.12:1156,54,0	1/1:2,15:17:30.10:738,30,0	1/1:4,23:28:57.19:1371,57,0	1/1:3,19:23:50.91:1189,51,0	1/1:4,19:23:45.15:1114,45,0	1/1:5,18:24:42.14:1029,42,0	1/1:9,0:40:44.16:373,44,0	1/1:6,0:21:10.36:155,10,0	1/1:0,0:6:10.98:49,11,0
chr10	19217924	.	G	GTGT	16262.61	PASS	AB=0.696;AC=49;AF=0.875;AN=56;BaseQRankSum=-1.329;DP=576;FS=0.000;HRun=0;HaplotypeScore=127.0447;InbreedingCoeff=0.7234;MQ=67.38;MQ0=1;MQRankSum=-3.530;QD=32.14;ReadPosRankSum=9.376;VQSLOD=4.5127;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:35:68.55:849,69,0	1/1:3,0:7:17.18:216,17,0	0/0:24,0:16:10.25:0,10,353	0/0:21,0:15:19.38:0,19,330	1/1:3,1:8:3.62:160,4,0	1/1:1,23:24:39.13:844,39,0	1/1:1,27:30:51.17:1060,51,0	0/0:24,0:24:58.97:0,59,602	1/1:4,2:26:72.84:935,73,0	1/1:9,0:30:77.93:1023,78,0	1/1:4,0:9:6.75:156,7,0	1/1:0,19:19:45.15:969,45,0	1/1:3,2:18:37.04:526,37,0	1/1:1,27:33:63.22:1334,63,0	1/1:0,0:26:72.08:682,72,0	1/1:6,0:12:25.81:406,26,0	1/1:15,2:39:72.65:1104,73,0	1/1:10,2:19:24.92:414,25,0	1/1:5,0:6:5.21:176,5,0	0/1:9,2:16:18.97:226,0,19	1/1:11,2:28:60:875,60,0	1/1:1,13:15:39.13:847,39,0	1/1:0,17:20:36.12:781,36,0	1/1:1,16:19:36.54:769,37,0	1/1:0,16:18:30.10:640,30,0	1/1:11,1:20:50.15:555,50,0	1/1:9,0:17:34.04:357,34,0	1/1:3,0:11:29.22:361,29,0
chr10	19217925	.	G	GT	3155.27	PASS	AB=0.669;AC=22;AF=0.393;AN=56;BaseQRankSum=-3.295;DP=575;FS=2.271;HRun=0;HaplotypeScore=153.1228;InbreedingCoeff=0.2521;MQ=66.99;MQ0=1;MQRankSum=-0.727;QD=10.38;ReadPosRankSum=3.595;VQSLOD=3.9651;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:17,18:35:59.30:270,0,59	0/1:3,4:7:12.89:66,0,13	0/0:23,0:15:26.28:0,26,300	0/0:22,0:15:9.92:0,10,323	0/1:6,4:10:27.69:63,0,28	0/0:24,0:23:21.90:0,22,64	0/0:30,0:30:26.64:0,27,82	0/0:23,0:23:32.86:0,33,295	1/1:7,20:27:59.71:456,60,0	1/1:9,21:30:5.14:364,5,0	0/1:4,5:9:15.04:71,0,15	0/0:19,0:19:25.89:0,26,80	0/1:5,13:18:1.93:232,0,2	0/0:31,0:31:23.40:0,23,78	0/0:26,0:26:52.88:0,53,179	1/1:6,6:12:11.98:184,12,0	1/1:17,22:39:43.11:516,43,0	1/1:3,7:19:13.28:179,13,0	0/1:5,1:6:21.14:39,0,21	0/1:8,5:17:78.66:87,0,79	1/1:14,15:29:36.82:359,37,0	0/0:15,0:15:24.29:0,24,75	0/0:20,0:20:15.11:0,15,38	0/0:19,0:19:8.78:0,9,23	0/0:19,0:19:16.22:0,16,49	0/1:11,8:19:20.50:151,0,21	0/1:8,8:16:18.79:182,0,19	0/1:3,8:11:12.45:124,0,12
chr10	19221553	.	AT	A	973.81	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=5.125;DP=681;FS=6.288;HRun=4;HaplotypeScore=82.7231;InbreedingCoeff=0.6206;MQ=83.28;MQ0=1;MQRankSum=3.935;QD=19.87;ReadPosRankSum=-3.930;VQSLOD=2.2327;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:69.23:0,69,962	0/0:9,0:9:24.08:0,24,336	0/0:20,0:21:9.06:0,9,232	0/1:19,0:19:47.68:48,0,149	0/0:27,0:27:81.26:0,81,1114	0/0:41,0:41:99:0,123,1672	0/0:14,0:14:42.12:0,42,570	1/1:1,29:30:87.25:1032,87,0	0/0:21,0:21:60.19:0,60,822	0/0:27,0:27:75.24:0,75,1036	0/0:29,0:29:84.26:0,84,1143	0/0:17,0:17:51.17:0,51,712	0/0:25,0:25:72.22:0,72,974	0/0:30,0:30:90.29:0,90,1241	0/0:29,0:29:81.27:0,81,1134	0/0:30,0:30:87.28:0,87,1202	0/0:26,0:26:72.21:0,72,988	0/0:18,0:18:48.12:0,48,648	0/0:9,0:9:27.09:0,27,376	0/0:28,0:28:81.22:0,81,1096	0/0:24,0:24:69.22:0,69,950	0/0:25,0:25:72.24:0,72,1007	0/0:29,0:29:81.24:0,81,1095	0/0:18,0:18:45.15:0,45,629	0/0:29,0:29:84.28:0,84,1176	0/0:23,0:22:66.21:0,66,910	0/0:39,0:39:99:0,117,1546	0/0:20,0:20:60.20:0,60,839
chr10	19223346	.	G	GCTGGCCTGTAGGGCT	94949.63	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-5.413;DP=760;FS=1.878;HRun=0;HaplotypeScore=262.5490;InbreedingCoeff=0.9643;MQ=76.23;MQ0=0;MQRankSum=-11.482;QD=134.49;ReadPosRankSum=4.398;VQSLOD=4.7704;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:17,20:45:93.32:6033,93,0	1/1:2,4:7:18.06:1189,18,0	0/0:29,0:29:78.27:0,78,2965	0/0:25,0:25:66.18:0,66,2444	1/1:18,13:37:57.11:3460,57,0	1/1:9,5:15:35.99:1829,36,0	1/1:21,9:31:69.24:4652,69,0	1/1:24,4:30:81.24:4636,81,0	1/1:14,11:27:66.23:4104,66,0	1/1:15,10:27:78.26:4530,78,0	1/1:13,13:29:54.10:3102,54,0	1/1:17,18:38:99:6689,105,0	1/1:13,18:40:90.05:5591,90,0	1/1:18,11:30:84.22:4768,84,0	1/1:21,17:45:90.09:5967,90,0	1/1:19,6:31:72.11:4031,72,0	1/1:12,4:20:42.14:2843,42,0	1/1:7,2:9:21:1154,21,0	1/1:12,4:18:42.13:2541,42,0	1/1:16,15:35:78.22:4475,78,0	1/1:15,3:22:27.05:1492,27,0	1/1:12,11:30:60.05:3160,60,0	1/1:16,9:27:48.16:2750,48,0	1/1:8,10:21:45.15:2922,45,0	1/1:11,6:19:39:1856,39,0	1/1:23,12:39:99:6055,111,0	1/1:15,12:31:78.18:4509,78,0	1/1:2,1:3:9.03:611,9,0
chr10	19224349	.	TA	T	578.56	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.498;DP=618;FS=4.053;HRun=7;HaplotypeScore=56.5244;InbreedingCoeff=0.9676;MQ=62.66;MQ0=1;MQRankSum=-4.393;QD=24.11;ReadPosRankSum=-3.827;VQSLOD=2.3981;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:96.29:0,96,1195	0/0:10,0:10:27.09:0,27,339	0/0:7,0:6:14.08:0,14,157	0/0:8,0:8:18.04:0,18,206	0/0:31,0:31:84.25:0,84,1036	0/0:24,0:24:66.20:0,66,817	0/0:22,0:22:63.11:0,63,725	1/1:2,22:24:66.15:673,66,0	0/0:14,0:14:33.11:0,33,415	0/0:33,0:33:96.31:0,96,1208	0/0:27,0:27:75.24:0,75,943	0/0:24,0:24:69.22:0,69,868	0/0:23,0:23:66.19:0,66,816	0/0:22,0:22:54.17:0,54,679	0/0:24,0:24:66.17:0,66,801	0/0:22,0:22:54.16:0,54,666	0/0:29,0:29:84.27:0,84,1057	0/0:16,0:16:39.12:0,39,488	0/0:24,0:24:66.19:0,66,807	0/0:28,0:28:78.24:0,78,970	0/0:9,0:9:21.05:0,21,251	0/0:23,0:23:60.17:0,60,729	0/0:18,0:18:51.16:0,51,639	0/0:23,0:23:54.13:0,54,662	0/0:27,0:27:75.24:0,75,944	0/0:34,0:34:93.30:0,93,1170	0/0:29,0:29:78.25:0,78,981	0/0:10,0:10:30.10:0,30,377
chr10	19224590	.	T	TACAC	4760.22	PASS	AB=0.694;AC=39;AF=0.696;AN=56;BaseQRankSum=-3.395;DP=938;FS=2.010;HRun=0;HaplotypeScore=173.0588;InbreedingCoeff=0.0456;MQ=57.57;MQ0=24;MQRankSum=1.540;QD=5.91;ReadPosRankSum=-0.317;VQSLOD=4.1128;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:53,0:51:29.90:30,0,141	1/1:2,0:12:16.72:81,17,0	0/0:45,0:16:4.68:0,5,49	0/0:41,0:14:12.02:0,12,170	1/1:3,0:28:10.98:50,11,0	1/1:6,16:28:20.22:370,20,0	0/1:19,19:41:6.69:7,0,18	1/1:31,0:27:12.68:79,13,0	0/1:23,0:21:1.70:10,0,2	0/1:8,0:31:59.48:251,0,59	1/1:3,0:14:8.23:37,8,0	1/1:7,34:43:38.77:837,39,0	0/1:7,0:31:37.39:90,0,37	1/1:13,26:40:14.49:314,14,0	0/0:45,0:43:16.90:0,17,55	0/1:9,0:35:37.34:119,0,37	0/1:9,0:44:47.99:180,0,48	0/1:10,0:36:99:117,0,104	0/1:10,0:11:25.71:69,0,26	1/1:8,0:21:8.29:38,8,0	1/1:35,0:90:26.13:291,26,0	1/1:1,18:19:8.61:161,9,0	1/1:3,13:18:6.02:149,6,0	1/1:20,48:68:18.46:752,18,0	1/1:3,20:25:18.05:397,18,0	0/1:8,0:29:2.48:190,0,2	0/1:11,0:17:62.48:101,0,62	1/1:3,0:9:5.87:40,6,0
chr10	19224594	.	C	CAG	5102.70	PASS	AB=0.997;AC=25;AF=0.446;AN=56;BaseQRankSum=4.904;DP=950;FS=17.173;HRun=0;HaplotypeScore=152.9750;InbreedingCoeff=-0.2727;MQ=57.67;MQ0=26;MQRankSum=7.507;QD=7.08;ReadPosRankSum=15.080;VQSLOD=1.4199;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:6,48:52:33.19:915,33,0	0/1:12,0:12:6.30:100,0,6	0/0:40,0:14:23.79:0,24,178	0/0:37,0:11:23.75:0,24,236	0/1:30,0:30:51.35:76,0,51	0/1:27,0:27:30.71:31,0,115	0/0:41,0:41:17.25:0,17,305	0/0:33,0:27:66.93:0,67,489	1/1:1,21:20:24.54:456,25,0	0/1:32,0:32:99:340,0,185	0/1:16,0:16:47.30:47,0,86	0/1:44,0:43:37.04:52,0,37	0/1:33,0:33:99:203,0,150	0/0:41,0:41:23.88:0,24,218	1/1:3,42:44:42.14:788,42,0	0/1:35,1:35:99:303,0,119	0/1:45,1:46:99:425,0,162	0/1:36,0:36:99:260,0,229	0/1:13,0:11:60.07:129,0,60	0/1:21,0:20:47.51:48,0,82	0/1:97,0:94:99:461,0,354	0/1:20,0:19:16.83:21,0,17	1/1:17,0:17:1.77:5,2,0	0/1:70,0:70:13.20:13,0,270	0/0:25,0:25:5.29:0,5,61	0/1:29,0:29:99:237,0,118	0/1:20,0:20:99:193,0,162	0/0:10,0:10:4.01:0,4,57
chr10	19225753	.	AT	A	1012.63	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=8.656;DP=751;FS=2.917;HRun=6;HaplotypeScore=83.0166;InbreedingCoeff=0.9700;MQ=84.25;MQ0=0;MQRankSum=-3.324;QD=23.55;ReadPosRankSum=-5.236;VQSLOD=1.1929;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:87.22:0,87,1083	0/0:5,0:5:12.04:0,12,158	0/0:28,0:28:40.01:0,40,790	0/0:22,0:22:61.78:0,62,681	0/0:37,0:37:99:0,108,1387	0/0:30,0:30:90.29:0,90,1184	0/0:16,0:16:47.96:0,48,578	1/1:6,36:43:99:1107,111,0	0/0:31,0:31:93.29:0,93,1209	0/0:34,0:34:96.28:0,96,1218	0/0:35,0:34:99:0,99,1302	0/0:21,0:21:60.19:0,60,788	0/0:33,1:34:58.09:0,58,1069	0/0:27,0:27:81.26:0,81,1066	0/0:4,0:37:86.37:0,86,452	0/0:34,0:34:99:0,102,1302	0/0:28,0:28:81.26:0,81,1065	0/0:15,0:15:42.14:0,42,549	0/0:20,0:20:48.14:0,48,606	0/0:38,0:38:99:0,102,1313	0/0:18,0:18:51.14:0,51,643	0/0:23,0:23:66.19:0,66,840	0/0:24,0:24:72.23:0,72,945	0/0:19,0:19:57.19:0,57,748	0/0:30,0:30:87.27:0,87,1132	0/0:26,0:26:72.23:0,72,947	0/0:34,0:34:93.28:0,93,1202	0/0:11,0:11:33.10:0,33,422
chr10	19226516	.	GCT	G	632.14	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-3.424;DP=305;FS=24.069;HRun=0;HaplotypeScore=71.4484;InbreedingCoeff=0.7572;MQ=98.35;MQ0=9;MQRankSum=-0.806;QD=15.80;ReadPosRankSum=-1.839;VQSLOD=1.2721;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:4:11.98:0,12,99	1/1:5,0:5:11.99:100,12,0	0/0:44,0:22:41.12:0,41,458	0/0:61,0:27:43.04:0,43,398	1/1:6,0:6:14.49:120,14,0	0/0:21,0:18:44.20:0,44,462	0/0:3,0:3:8.98:0,9,71	0/0:44,0:44:99:0,132,1341	0/0:3,0:3:8.99:0,9,74	1/1:8,0:8:21.02:196,21,0	1/1:3,0:3:8.99:75,9,0	0/0:8,0:8:20.64:0,21,179	1/1:5,0:5:11.98:99,12,0	0/0:4,0:4:9:0,9,89	0/0:15,0:15:26.13:0,26,357	0/0:6,0:6:17.98:0,18,149	0/0:14,0:14:15.29:0,15,236	0/0:11,0:11:2.39:0,2,321	0/0:6,0:6:18.02:0,18,176	0/0:1,0:1:3:0,3,25	0/0:10,0:10:26.97:0,27,245	0/0:1,0:1:3:0,3,25	0/0:1,0:1:3.01:0,3,32	0/0:2,0:2:5.99:0,6,48	0/0:6,0:5:14.02:0,14,150	1/1:6,0:6:18:160,18,0	1/1:2,0:2:5.99:48,6,0	1/1:0,5:5:2.96:19,3,0
chr10	19226517	.	C	CTA	890.53	PASS	AB=0.921;AC=25;AF=0.658;AN=38;BaseQRankSum=-2.805;DP=312;FS=0.000;HRun=0;HaplotypeScore=78.6972;InbreedingCoeff=0.0943;MQ=96.92;MQ0=9;MQRankSum=-1.828;QD=6.60;ReadPosRankSum=-0.318;VQSLOD=2.4082;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/1:5,0:5:0:0,0,0	0/0:44,0:22:18.28:0,18,185	0/0:61,0:27:10.49:0,10,84	0/1:5,0:5:0:0,0,0	0/1:18,6:21:16.20:324,0,16	1/1:2,1:3:3.01:52,3,0	0/0:42,0:42:72.13:0,72,818	./.	1/1:7,0:7:1.25:3,1,0	1/1:4,0:4:3:25,3,0	1/1:5,4:9:11.07:134,11,0	./.	1/1:4,0:4:3.01:47,3,0	0/1:15,0:15:28.53:29,0,47	./.	0/1:14,1:15:37.23:101,0,37	0/1:11,2:13:75.99:76,0,85	1/1:6,0:6:3.01:40,3,0	./.	1/1:8,0:8:0.47:1,0,0	./.	1/1:0,1:1:3.01:41,3,0	./.	0/1:9,2:10:23.70:121,0,24	./.	./.	1/1:5,0:5:2.94:18,3,0
chr10	19226534	.	T	TAGATAGATAGATAG	1702.17	PASS	AB=0.952;AC=15;AF=0.357;AN=42;BaseQRankSum=-6.474;DP=262;FS=6.942;HRun=0;HaplotypeScore=127.5743;InbreedingCoeff=0.0215;MQ=85.51;MQ0=11;MQRankSum=-3.326;QD=12.42;ReadPosRankSum=-1.088;VQSLOD=1.7102;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:3,0:3:2.98:0,3,22	0/0:1,0:1:3:0,3,25	0/0:41,0:17:29.76:0,30,269	0/0:58,0:17:0.93:0,1,107	0/0:1,0:1:3:0,3,25	0/1:19,0:16:44.39:84,0,44	1/1:2,0:2:2.70:12,3,0	0/1:53,0:53:99:1058,0,189	./.	0/0:1,0:1:2.99:0,3,24	0/0:2,0:2:0:0,0,0	0/1:10,0:10:9.25:77,0,9	./.	1/1:4,0:4:3.01:71,3,0	0/1:6,1:12:71.22:372,0,71	./.	0/1:14,0:14:13.81:14,0,466	0/0:12,0:12:13.22:0,13,740	0/0:3,0:3:6.45:0,6,101	./.	0/0:1,0:1:2.99:0,3,24	./.	1/1:2,0:2:5.74:37,6,0	1/1:2,0:2:5.96:44,6,0	0/1:16,0:15:56.96:57,0,122	./.	./.	0/1:3,0:3:0:0,0,0
chr10	19226536	.	TAG	T	654.69	PASS	AB=0.956;AC=21;AF=0.525;AN=40;BaseQRankSum=-3.280;DP=265;FS=2.547;HRun=0;HaplotypeScore=87.4281;InbreedingCoeff=0.0365;MQ=80.84;MQ0=13;MQRankSum=4.174;QD=6.89;ReadPosRankSum=-1.774;VQSLOD=3.0232;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,0:3:2.99:23,3,0	0/1:1,0:1:0:0,0,0	0/0:42,0:17:14.37:0,14,177	0/0:55,0:14:13.26:0,13,94	0/1:1,0:1:0:0,0,0	0/1:16,4:17:76.29:128,0,76	1/1:3,0:3:0.38:40,0,0	0/0:54,0:54:99:0,158,1458	./.	./.	1/1:3,0:3:3:25,3,0	0/1:10,0:10:20.14:56,0,20	./.	0/0:0,4:4:0.47:0,0,1	0/0:12,0:12:17.79:0,18,197	./.	0/1:12,3:15:36.38:174,0,36	0/1:12,0:12:71.30:79,0,71	0/1:3,0:3:13.70:21,0,14	./.	1/1:1,0:1:0.47:1,0,0	./.	0/1:2,0:2:1.36:20,0,1	1/1:2,0:2:5.99:48,6,0	0/1:15,1:15:25.12:143,0,25	./.	./.	1/1:3,0:3:2.94:18,3,0
chr10	19226538	.	G	GATAT	1963.96	PASS	AB=1.000;AC=25;AF=0.735;AN=34;BaseQRankSum=-2.557;DP=261;FS=3.879;HRun=0;HaplotypeScore=95.0190;InbreedingCoeff=0.1303;MQ=79.83;MQ0=12;MQRankSum=1.912;QD=12.43;ReadPosRankSum=1.905;VQSLOD=3.0545;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,0:3:0.47:1,0,0	./.	0/0:41,0:17:1.13:0,1,55	0/1:52,0:13:13.90:14,0,23	./.	1/1:16,4:17:28.08:515,28,0	1/1:2,1:3:9:119,9,0	0/0:54,0:54:71.77:0,72,556	./.	./.	./.	1/1:6,3:9:18.06:349,18,0	./.	1/1:5,0:5:3.01:73,3,0	0/1:12,0:12:30.69:117,0,31	./.	0/1:15,0:15:39.07:39,0,41	0/1:12,0:12:22.57:127,0,23	1/1:3,0:3:5.97:46,6,0	./.	0/1:1,0:1:0:0,0,0	./.	1/1:1,1:2:6.02:123,6,0	1/1:2,0:2:6.02:92,6,0	1/1:15,1:15:30.04:446,30,0	./.	./.	1/1:3,0:3:2.94:18,3,0
chr10	19229667	.	TAA	T	12309.71	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=14.703;DP=654;FS=2.028;HRun=3;HaplotypeScore=81.0843;InbreedingCoeff=0.9998;MQ=87.16;MQ0=2;MQRankSum=-3.684;QD=40.90;ReadPosRankSum=4.866;VQSLOD=4.3525;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:90.31:0,90,1738	0/0:13,0:13:39.13:0,39,754	0/0:25,0:25:69.14:0,69,1261	0/0:20,0:20:58.98:0,59,1000	0/0:35,0:35:99:0,102,1938	1/1:0,22:21:57.19:862,57,0	1/1:2,16:18:48.16:735,48,0	0/0:37,0:37:99:0,111,2111	0/0:26,0:26:75.26:0,75,1449	0/0:17,0:17:51.16:0,51,950	0/0:29,0:29:87.29:0,87,1648	1/1:0,26:26:66.22:1011,66,0	0/0:28,0:28:81.28:0,81,1553	1/1:1,20:21:60.20:919,60,0	0/0:25,0:25:72.25:0,72,1391	1/1:1,27:28:81.27:1241,81,0	1/1:0,24:24:66.22:1011,66,0	1/1:0,11:11:27.09:414,27,0	1/1:0,23:23:69.19:1009,69,0	1/1:2,26:28:75.25:1138,75,0	1/1:1,23:23:63.21:965,63,0	1/1:1,16:17:44.84:629,45,0	1/1:0,18:18:54.18:815,54,0	1/1:0,24:24:66.22:1011,66,0	1/1:0,17:17:36.12:551,36,0	0/0:23,0:23:69.24:0,69,1325	0/0:32,0:31:96.33:0,96,1839	0/0:13,0:13:39.13:0,39,753
chr10	19230077	.	AC	A	5774.20	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=3.174;DP=596;FS=5.477;HRun=10;HaplotypeScore=92.1738;InbreedingCoeff=0.9693;MQ=75.46;MQ0=1;MQRankSum=-0.528;QD=14.29;ReadPosRankSum=4.393;VQSLOD=5.1098;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:10,0:43:59.06:174,59,0	1/1:2,8:10:17.99:156,18,0	0/0:31,0:27:29.45:0,29,380	0/0:24,0:20:5.71:0,6,211	1/1:8,12:20:47.84:397,48,0	0/0:16,0:16:21.06:0,21,231	0/0:20,0:21:45.08:0,45,471	1/1:16,2:35:35.14:119,35,0	1/1:5,0:23:34.63:102,35,0	1/1:7,9:16:35.78:288,36,0	1/1:4,16:20:50.99:442,51,0	0/0:23,0:23:54.11:0,54,570	1/1:4,19:23:47.98:417,48,0	0/0:23,0:23:60.12:0,60,631	1/1:2,0:25:34.63:102,35,0	1/1:5,25:30:65.98:573,66,0	1/1:4,19:23:44.99:391,45,0	1/1:6,24:30:71.97:625,72,0	1/1:6,13:19:35.93:304,36,0	1/1:9,8:17:10.33:224,10,0	1/1:2,10:12:29.98:260,30,0	0/0:10,0:10:27.06:0,27,291	0/0:14,0:14:21.06:0,21,232	0/0:14,0:14:36.06:0,36,384	0/0:14,0:14:30.07:0,30,322	1/1:12,18:30:41.79:588,42,0	1/1:3,20:23:59.90:509,60,0	1/1:0,5:5:11.99:104,12,0
chr10	19231274	.	ATCTTT	A	3565.45	PASS	AB=1.000;AC=38;AF=0.679;AN=56;BaseQRankSum=5.919;DP=477;FS=6.607;HRun=0;HaplotypeScore=109.8476;InbreedingCoeff=-0.0702;MQ=69.39;MQ0=6;MQRankSum=-5.016;QD=9.05;ReadPosRankSum=2.409;VQSLOD=2.0584;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:16:15:131,15,0	1/1:9,1:10:29.14:299,29,0	0/0:31,0:17:17.52:0,18,225	0/0:33,0:16:15.06:0,15,122	1/1:16,1:16:33.50:349,33,0	0/1:25,0:24:44.74:163,0,45	0/1:11,0:9:34.01:38,0,34	1/1:20,1:21:24.56:315,25,0	1/1:3,1:4:9.02:115,9,0	1/1:10,0:10:14.23:123,14,0	1/1:8,0:7:8.92:77,9,0	0/1:16,0:16:71.39:71,0,93	1/1:12,0:12:18.04:234,18,0	1/1:9,0:7:8.84:54,9,0	1/1:18,0:18:28.54:346,29,0	0/1:18,0:18:4.68:5,0,135	0/1:19,0:16:45.58:46,0,98	0/0:19,0:16:0.82:0,1,92	0/1:20,0:20:51.98:52,0,104	0/1:18,0:18:71.48:71,0,80	0/1:17,0:17:32.09:32,0,65	0/1:23,0:23:87.17:102,0,87	0/1:13,0:13:42.74:102,0,43	0/1:16,0:16:22.46:90,0,22	0/1:25,0:25:78.59:79,0,124	1/1:19,1:20:1.72:156,2,0	1/1:24,1:25:43.87:481,44,0	1/1:2,0:2:3.01:34,3,0
chr10	19231287	.	TTTTC	T	3894.78	PASS	AB=0.994;AC=36;AF=0.643;AN=56;BaseQRankSum=4.688;DP=502;FS=6.269;HRun=0;HaplotypeScore=103.7230;InbreedingCoeff=0.0323;MQ=57.04;MQ0=17;MQRankSum=-4.489;QD=9.52;ReadPosRankSum=6.644;VQSLOD=1.6677;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:18,2:19:28.55:219,29,0	1/1:13,1:14:33.91:380,34,0	0/0:28,0:14:17.43:0,17,225	0/0:28,0:11:15.87:0,16,124	1/1:22,1:22:28.47:352,28,0	0/1:23,0:22:49.96:96,0,50	0/1:16,0:13:17.03:17,0,43	1/1:25,2:26:47.60:441,48,0	0/1:11,1:12:0.18:165,0,0	1/1:16,2:17:3.58:224,4,0	1/1:13,2:12:11.98:154,12,0	0/1:17,0:17:38.88:39,0,93	1/1:8,3:11:27.74:248,28,0	1/1:7,0:4:11.16:52,11,0	1/1:19,3:21:43.29:472,43,0	0/0:18,0:18:6.27:0,6,141	0/1:20,0:17:23.43:23,0,98	0/0:19,0:16:13.81:0,14,133	0/1:18,0:16:13.47:13,0,131	0/1:16,0:15:33.62:34,0,84	0/1:11,0:11:15.44:15,0,65	0/1:22,0:22:69.64:70,0,83	0/1:14,0:14:43.17:64,0,43	0/1:14,0:13:29.79:54,0,30	0/1:22,0:22:38.92:39,0,128	1/1:14,0:14:19.31:207,19,0	1/1:29,0:28:15.12:461,15,0	1/1:3,1:3:3.59:57,4,0
chr10	19231288	.	TTTC	T	3150.68	PASS	AB=0.992;AC=31;AF=0.554;AN=56;BaseQRankSum=5.048;DP=502;FS=9.155;HRun=0;HaplotypeScore=98.3914;InbreedingCoeff=0.2761;MQ=55.64;MQ0=19;MQRankSum=-4.549;QD=8.78;ReadPosRankSum=5.850;VQSLOD=1.5811;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,1:19:24.48:155,24,0	1/1:11,3:14:35.94:383,36,0	0/0:27,0:13:17.45:0,17,227	0/0:28,0:11:14.60:0,15,116	1/1:24,0:23:31.69:376,32,0	0/1:25,0:24:28.09:28,0,62	0/1:16,0:13:2.53:3,0,45	1/1:26,0:25:42.50:402,42,0	0/1:12,0:12:0.71:163,0,1	0/1:16,1:16:11.24:203,0,11	1/1:13,2:12:13.24:138,13,0	0/1:16,0:16:4.18:4,0,98	1/1:10,1:11:26.03:237,26,0	1/1:7,0:4:8.55:33,9,0	1/1:21,1:21:33.32:393,33,0	0/0:18,0:18:17.48:0,17,154	0/1:18,0:17:0.06:0,0,101	0/0:19,0:16:9.54:0,10,136	0/0:18,0:16:17.75:0,18,170	0/1:15,0:14:3.84:4,0,94	0/0:11,0:11:1.61:0,2,70	0/1:21,0:21:20.51:21,0,90	0/1:14,0:14:22.50:22,0,48	0/1:14,0:13:19.15:19,0,33	0/0:22,0:22:0.46:0,0,136	1/1:14,2:15:31.36:256,31,0	0/1:28,1:28:0.58:429,0,1	1/1:6,0:4:5.91:59,6,0
chr10	19231289	.	TTC	T	2785.23	PASS	AB=0.989;AC=27;AF=0.482;AN=56;BaseQRankSum=-2.585;DP=496;FS=7.821;HRun=0;HaplotypeScore=92.6112;InbreedingCoeff=0.6659;MQ=55.47;MQ0=20;MQRankSum=-0.902;QD=10.51;ReadPosRankSum=-2.402;VQSLOD=1.9611;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:18:23.49:160,23,0	1/1:14,0:14:35.43:317,35,0	0/0:27,0:13:17.46:0,17,217	0/0:28,0:11:14.63:0,15,112	1/1:25,0:23:32.85:350,33,0	0/0:24,0:23:15.17:0,15,104	0/1:16,0:13:10.79:11,0,37	1/1:26,0:25:52.81:422,53,0	1/1:11,1:12:4.91:142,5,0	0/1:16,1:16:14.14:163,0,14	1/1:14,0:11:16.63:129,17,0	0/0:16,0:16:20.18:0,20,135	1/1:11,0:11:23.45:198,23,0	0/1:7,0:4:0.04:3,0,0	1/1:18,2:19:25.49:354,25,0	0/0:17,0:17:24.85:0,25,167	0/0:20,0:18:19.88:0,20,145	0/0:19,0:16:6.33:0,6,146	0/0:18,0:16:33.15:0,33,205	0/0:15,0:14:16.17:0,16,121	0/0:11,0:11:13.49:0,13,90	0/1:21,0:21:0.77:1,0,108	0/0:14,0:14:9.22:0,9,73	0/1:14,0:13:5.41:5,0,37	0/0:22,0:22:22.91:0,23,173	1/1:15,0:14:33.22:260,33,0	1/1:28,0:27:7.20:416,7,0	1/1:6,0:4:7.67:57,8,0
chr10	19231643	.	T	TGGG	6012.66	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-0.601;DP=588;FS=1.706;HRun=8;HaplotypeScore=132.5255;InbreedingCoeff=0.6919;MQ=84.16;MQ0=0;MQRankSum=-8.322;QD=10.93;ReadPosRankSum=4.655;VQSLOD=1.0740;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:30:27.09:416,27,0	1/1:8,0:8:15.28:62,15,0	0/0:19,0:19:41.99:0,42,486	0/0:19,0:19:20.83:0,21,387	1/1:20,0:20:14.28:53,14,0	1/1:7,5:17:18.01:270,18,0	1/1:6,12:23:30.06:531,30,0	1/1:11,0:11:9.02:123,9,0	1/1:23,0:23:47.85:736,48,0	1/1:18,0:23:21.75:111,22,0	1/1:14,0:13:12.53:51,13,0	1/1:3,6:9:6.02:121,6,0	1/1:23,0:25:45.32:211,45,0	1/1:10,12:23:12.02:204,12,0	1/1:29,0:30:58.03:293,58,0	1/1:10,0:27:38.35:281,38,0	1/1:6,0:44:86.17:649,86,0	1/1:3,0:23:40.10:302,40,0	1/1:6,0:15:20.90:158,21,0	1/1:3,0:9:7.22:49,7,0	1/1:14,0:31:37.43:282,37,0	1/1:10,5:17:3.01:61,3,0	1/1:7,2:12:5.97:83,6,0	1/1:13,11:32:24.94:336,25,0	1/1:6,5:15:9.01:144,9,0	1/1:22,0:25:6.24:128,6,0	1/1:24,0:25:51.84:236,52,0	1/1:17,0:17:32.40:121,32,0
chr10	19231651	.	G	GGA	9516.01	PASS	AB=1.000;AC=40;AF=0.714;AN=56;BaseQRankSum=-4.703;DP=479;FS=8.452;HRun=0;HaplotypeScore=79.0510;InbreedingCoeff=0.0940;MQ=91.55;MQ0=0;MQRankSum=-7.054;QD=22.13;ReadPosRankSum=9.135;VQSLOD=3.9842;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,0:21:27.09:339,27,0	1/1:0,8:8:18.06:340,18,0	0/0:19,0:19:56.91:0,57,681	0/0:22,0:22:48.98:0,49,595	1/1:0,9:9:18.06:340,18,0	0/1:14,0:14:51.21:55,0,51	0/1:20,0:20:50.17:52,0,50	1/1:0,2:13:32.88:323,33,0	1/1:0,1:20:48.10:573,48,0	1/1:6,10:19:39.06:599,39,0	1/1:0,9:9:15.05:283,15,0	0/0:8,0:8:1.77:0,2,44	1/1:2,17:20:54.19:1000,54,0	0/1:18,0:18:18.04:18,0,105	1/1:3,26:32:74.77:1372,75,0	0/1:22,0:22:61.82:211,0,62	0/1:39,0:39:32.50:540,0,33	1/1:20,0:20:34.01:283,34,0	0/1:13,0:13:70.81:102,0,71	1/1:7,0:6:1.37:39,1,0	0/1:21,0:21:28.99:230,0,29	0/1:9,0:9:1.21:1,0,45	1/1:4,0:4:5.58:33,6,0	0/1:24,0:24:69.73:74,0,70	0/1:10,0:10:15.52:38,0,16	1/1:3,15:19:51.07:772,51,0	1/1:1,20:22:63.22:1163,63,0	1/1:0,16:16:39.13:737,39,0
chr10	19235546	.	A	AT	20157.47	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-2.755;DP=672;FS=3.939;HRun=6;HaplotypeScore=104.9457;InbreedingCoeff=0.9986;MQ=78.87;MQ0=0;MQRankSum=-7.314;QD=31.79;ReadPosRankSum=3.935;VQSLOD=4.2599;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,27:29:75.24:943,75,0	1/1:3,14:17:48.13:588,48,0	0/0:16,0:15:39.04:0,39,386	0/0:22,0:21:26.74:0,27,258	1/1:5,20:25:66.03:745,66,0	1/1:3,26:29:78.25:981,78,0	1/1:2,20:22:57.18:717,57,0	1/1:7,24:31:72.19:866,72,0	1/1:4,15:19:36.12:453,36,0	1/1:3,21:24:66.21:830,66,0	1/1:1,15:16:39.12:491,39,0	1/1:0,24:24:66.21:830,66,0	1/1:2,14:16:45.09:534,45,0	1/1:1,16:17:48.15:604,48,0	1/1:7,24:31:72.20:889,72,0	1/1:1,26:27:69.22:868,69,0	1/1:4,36:40:99:1283,102,0	1/1:1,20:21:51.16:642,51,0	1/1:4,19:23:57.13:674,57,0	1/1:4,18:22:51.13:625,51,0	1/1:5,31:36:84.27:1057,84,0	1/1:2,20:22:32.45:673,32,0	1/1:0,28:28:78.25:981,78,0	1/1:1,25:26:69.22:868,69,0	1/1:3,19:22:57.18:717,57,0	1/1:5,20:25:63.20:792,63,0	1/1:4,29:31:93.30:1165,93,0	1/1:1,8:9:27.09:340,27,0
chr10	19235614	.	G	GT	8350.96	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-11.417;DP=677;FS=5.061;HRun=6;HaplotypeScore=120.5018;InbreedingCoeff=0.9998;MQ=84.19;MQ0=0;MQRankSum=-4.608;QD=33.54;ReadPosRankSum=-0.195;VQSLOD=2.9550;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:78.17:0,78,796	1/1:0,16:16:48.15:599,48,0	0/0:29,0:28:35.40:0,35,527	0/0:18,0:18:35.64:0,36,339	1/1:4,35:39:99:1271,105,0	0/0:31,0:31:93.20:0,93,942	0/0:23,0:23:66.13:0,66,666	1/1:5,30:34:87.28:1095,87,0	0/0:23,0:23:57.10:0,57,573	1/1:2,24:26:75.22:928,75,0	1/1:3,11:14:36.11:450,36,0	0/0:23,0:23:66.15:0,66,673	1/1:2,19:21:57.18:717,57,0	0/0:16,0:16:45.10:0,45,459	1/1:2,23:25:72.22:892,72,0	0/0:24,0:24:66.15:0,66,673	0/0:34,0:34:93.12:0,93,920	0/0:18,0:18:54.12:0,54,550	0/0:23,0:23:54.06:0,54,526	0/0:23,0:23:66.15:0,66,673	0/0:28,0:28:75.17:0,75,765	0/0:21,0:21:54.12:0,54,551	0/0:25,0:25:66.15:0,66,673	0/0:26,0:26:63.14:0,63,643	0/0:14,0:14:39.08:0,39,392	1/1:1,21:23:69.22:859,69,0	1/1:3,36:38:96.30:1200,96,0	1/1:2,9:11:27.09:340,27,0
chr10	19238870	.	ATGTGTGTGTGTGTGTGTGTG	A	1360.16	PASS	AB=0.733;AC=12;AF=0.231;AN=52;BaseQRankSum=4.210;DP=555;FS=16.554;HRun=0;HaplotypeScore=253.6736;InbreedingCoeff=0.5680;MQ=67.22;MQ0=14;MQRankSum=-1.783;QD=14.17;ReadPosRankSum=-0.114;VQSLOD=1.0372;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:24.55:0,25,1233	0/1:6,2:8:8.65:153,0,9	./.	0/0:43,0:20:8.92:0,9,80	1/1:14,0:14:3:27,3,0	0/0:9,0:9:12.04:0,12,500	0/0:20,0:24:27.08:0,27,1227	0/0:26,0:25:8.46:0,8,149	0/0:16,0:16:15.05:0,15,692	1/1:11,7:18:9.35:220,9,0	./.	0/0:20,0:22:24.08:0,24,1004	1/1:13,0:16:11.95:339,12,0	0/0:10,0:16:12.04:0,12,571	0/0:11,0:13:18.06:0,18,849	0/0:20,0:21:24.06:0,24,1227	0/0:19,0:24:25.90:0,26,1610	0/0:30,0:33:56.22:0,56,3067	0/0:12,0:12:14.98:0,15,621	0/0:7,0:7:3.01:0,3,279	0/0:44,0:43:33.63:0,34,2167	0/0:11,0:11:6.02:0,6,361	0/0:13,0:15:8.59:0,9,489	0/0:33,0:32:42.11:0,42,2032	0/0:12,0:12:15.03:0,15,604	1/1:11,7:18:0.70:255,1,0	0/1:10,10:20:4.42:487,0,4	1/1:2,0:2:3:25,3,0
chr10	19242205	.	CT	C	2486.19	PASS	AB=0.976;AC=20;AF=0.357;AN=56;BaseQRankSum=-8.306;DP=750;FS=0.000;HRun=14;HaplotypeScore=143.6848;InbreedingCoeff=0.8560;MQ=61.64;MQ0=7;MQRankSum=8.636;QD=8.79;ReadPosRankSum=6.716;VQSLOD=1.5084;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,35:41:24.06:444,24,0	0/0:16,0:18:28.92:0,29,157	0/1:19,1:11:7.57:8,0,39	0/1:17,0:13:4.56:5,0,76	0/0:23,0:28:23.59:0,24,120	0/0:5,1:29:30.91:0,31,238	0/0:16,1:27:45.15:0,45,350	0/0:40,0:42:34.76:0,35,412	1/1:8,18:27:48.80:333,49,0	0/0:26,0:30:41.13:0,41,236	0/0:12,0:15:24.13:0,24,143	0/0:10,0:25:40.33:0,40,235	0/0:23,0:28:30.31:0,30,182	0/0:20,0:25:51.55:0,52,295	1/1:9,19:29:46.46:313,46,0	1/1:8,10:18:30.52:196,31,0	1/1:12,17:28:58.46:394,58,0	1/1:8,12:19:27.94:219,28,0	1/1:10,18:29:6.16:292,6,0	1/1:5,25:31:17.69:314,18,0	1/1:6,11:19:29.41:180,29,0	0/0:12,0:25:38.56:0,39,208	0/0:21,0:28:34.83:0,35,237	0/0:9,0:23:38.28:0,38,257	0/0:14,0:32:44.16:0,44,240	0/0:30,0:31:46:0,46,263	0/0:32,0:36:64.90:0,65,401	0/0:7,0:18:27.53:0,28,140
chr10	19243276	.	TAC	T	608.42	PASS	AB=1.000;AC=34;AF=0.895;AN=38;BaseQRankSum=1.641;DP=515;FS=4.658;HRun=0;HaplotypeScore=86.4260;InbreedingCoeff=0.0656;MQ=60.31;MQ0=11;MQRankSum=-1.277;QD=1.86;ReadPosRankSum=1.459;VQSLOD=1.4213;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	1/1:7,0:7:5.68:28,6,0	./.	./.	1/1:28,0:27:4.88:20,5,0	1/1:9,4:13:3:32,3,0	1/1:17,2:19:6.01:63,6,0	./.	1/1:11,0:19:11.36:56,11,0	./.	0/1:17,0:17:0:0,0,0	1/1:13,5:18:2.97:31,3,0	1/1:18,0:18:2.84:14,3,0	1/1:15,5:18:6.01:63,6,0	1/1:17,0:20:8.52:42,9,0	1/1:18,0:22:11.36:56,11,0	0/0:13,0:13:0:0,0,0	1/1:7,0:8:2.84:14,3,0	./.	1/1:8,0:11:8.52:42,9,0	./.	1/1:14,2:16:5.81:44,6,0	1/1:7,5:12:2.87:32,3,0	1/1:23,9:32:8.85:77,9,0	0/1:17,0:17:13.10:51,0,13	./.	1/1:27,0:27:5.68:28,6,0	./.
chr10	19243322	.	CACACACACAA	C	2437.54	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=1.883;DP=545;FS=0.949;HRun=0;HaplotypeScore=173.4532;InbreedingCoeff=0.5145;MQ=53.23;MQ0=18;MQRankSum=-4.109;QD=11.66;ReadPosRankSum=3.224;VQSLOD=2.1536;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:30:65.93:0,66,586	1/1:2,6:8:11.97:238,12,0	0/0:17,0:12:19.31:0,19,230	0/0:20,0:9:0.53:0,1,113	1/1:5,18:22:6.02:190,6,0	0/0:18,0:17:35.65:0,36,514	0/0:38,0:37:94.82:0,95,1327	0/0:23,0:21:63:0,63,578	0/1:21,0:20:99:125,0,237	1/1:16,0:16:41.73:400,42,0	1/1:11,1:12:30.02:312,30,0	0/0:27,0:27:63.91:0,64,1009	1/1:3,15:17:2.58:98,3,0	0/0:28,0:26:65.77:0,66,1155	0/1:17,0:17:99:107,0,210	0/1:19,0:19:99:150,0,229	0/0:12,0:11:29.36:0,29,210	0/1:7,0:7:28.19:28,0,93	0/0:5,0:5:14.97:0,15,129	0/1:15,0:15:99:141,0,180	0/0:18,0:15:29.90:0,30,251	0/0:15,0:15:38.95:0,39,657	0/0:13,0:13:27.46:0,27,327	0/0:41,0:40:81.13:0,81,1448	0/0:30,0:30:81.14:0,81,1504	1/1:19,0:19:40.36:398,40,0	1/1:3,16:19:5.94:200,6,0	1/1:15,0:13:32.52:245,33,0
chr10	19243370	.	GTCTGCGTGAGAGTGTCAGA	G	9816.27	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=12.415;DP=630;FS=0.486;HRun=0;HaplotypeScore=314.0105;InbreedingCoeff=0.9800;MQ=64.69;MQ0=0;MQRankSum=-12.255;QD=96.24;ReadPosRankSum=5.497;VQSLOD=3.8288;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,129,9989	0/0:8,0:8:12.04:0,12,1096	0/0:22,0:19:51.13:0,51,2498	0/0:24,0:22:60.21:0,60,3834	0/0:15,0:15:30.10:0,30,2743	0/0:25,0:25:75.26:0,75,6305	0/0:36,0:36:99:0,102,7057	0/0:35,0:35:93.31:0,93,6674	0/0:22,0:22:54.19:0,54,4568	0/0:26,0:26:75.25:0,75,5785	0/0:18,0:18:54.19:0,54,4033	0/0:25,0:25:72.25:0,72,6346	0/0:22,0:22:45.15:0,45,3676	0/0:28,0:28:84.29:0,84,7131	1/1:1,20:21:54.19:2891,54,0	1/1:3,19:22:51.18:2749,51,0	1/1:4,9:12:21.07:1132,21,0	1/1:5,6:11:18.06:971,18,0	1/1:2,4:6:12.04:525,12,0	1/1:5,8:13:21.04:991,21,0	1/1:7,9:15:12.04:558,12,0	0/0:21,0:21:60.20:0,60,4994	0/0:21,0:21:60.08:0,60,4989	0/0:45,0:45:99:0,132,11285	0/0:26,0:26:69.24:0,69,5393	0/0:26,0:26:78.26:0,78,5988	0/0:27,0:27:48.16:0,48,4384	0/0:12,0:12:33.11:0,33,2794
chr10	19244058	.	T	TC	6357.84	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-13.563;DP=625;FS=7.611;HRun=1;HaplotypeScore=85.7247;InbreedingCoeff=0.9989;MQ=92.64;MQ0=0;MQRankSum=-5.371;QD=39.74;ReadPosRankSum=1.713;VQSLOD=5.2686;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,108,1399	0/0:7,0:7:21.07:0,21,273	0/0:29,0:29:84.25:0,84,1052	0/0:26,0:26:78.25:0,78,1009	0/0:24,0:24:72.22:0,72,920	0/0:22,0:22:57.52:0,58,308	0/0:28,0:28:51.87:0,52,341	0/0:27,0:27:81.26:0,81,1052	0/0:15,0:15:42.13:0,42,533	0/0:22,0:22:63.20:0,63,806	0/0:20,0:20:53.84:0,54,670	0/0:27,0:27:75.14:0,75,415	0/0:16,0:16:42.14:0,42,545	0/0:17,0:17:49.15:0,49,282	1/1:0,16:16:45.15:674,45,0	1/1:1,27:28:75.25:1124,75,0	1/1:0,28:28:75.25:1123,75,0	1/1:1,17:18:53.77:768,54,0	1/1:2,17:19:54.18:804,54,0	1/1:1,23:24:63.14:910,63,0	1/1:0,27:27:66.16:955,66,0	0/0:29,0:29:68.77:0,69,398	0/0:18,0:18:44.69:0,45,235	0/0:21,0:21:60.92:0,61,348	0/0:18,0:18:25.12:0,25,230	0/0:24,0:24:66.21:0,66,854	0/0:25,0:25:75.23:0,75,960	0/0:12,0:12:36.12:0,36,467
chr10	19244548	.	ACCTACCTTCCTT	A	9742.41	PASS	AB=1.000;AC=24;AF=0.429;AN=56;BaseQRankSum=10.346;DP=663;FS=16.492;HRun=0;HaplotypeScore=258.9595;InbreedingCoeff=0.1134;MQ=66.73;MQ0=0;MQRankSum=-5.076;QD=23.36;ReadPosRankSum=7.238;VQSLOD=2.1889;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:46,0:46:99:350,0,450	0/0:10,0:10:7.33:0,7,71	0/0:20,0:20:57.13:0,57,793	0/0:12,0:10:19.82:0,20,215	0/0:29,0:29:40.60:0,41,702	0/1:17,0:17:88.84:313,0,89	0/1:22,0:22:99:135,0,242	0/0:38,0:37:5.20:0,5,515	0/1:20,0:20:99:414,0,133	0/0:36,0:36:43.08:0,43,617	0/1:16,0:16:2.40:2,0,52	0/1:29,0:29:99:735,0,137	0/0:31,0:31:32.24:0,32,358	0/1:26,0:26:99:365,0,190	0/1:39,0:39:99:1244,0,145	1/1:0,29:29:9.17:228,9,0	1/1:22,0:22:24.24:1319,24,0	1/1:13,0:13:39.09:873,39,0	1/1:1,34:34:99:1699,99,0	1/1:1,16:17:35.97:777,36,0	1/1:15,0:15:36.06:778,36,0	0/1:18,0:18:34.71:119,0,35	0/0:22,0:22:26.85:0,27,208	0/1:16,0:16:92.57:93,0,141	0/1:17,0:17:99:266,0,115	0/1:20,0:20:33.32:33,0,285	0/0:24,0:24:28.11:0,28,389	0/0:10,0:24:32.89:0,33,259
chr10	19244552	.	ACCTTCCTT	A	10670.29	PASS	AB=1.000;AC=49;AF=0.942;AN=52;BaseQRankSum=0.912;DP=653;FS=1.032;HRun=0;HaplotypeScore=207.6422;InbreedingCoeff=0.3376;MQ=65.02;MQ0=1;MQRankSum=2.049;QD=17.75;ReadPosRankSum=5.124;VQSLOD=3.6254;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:43,0:43:33.09:471,33,0	1/1:10,0:10:21.07:345,21,0	0/0:19,0:19:6.02:0,6,94	./.	1/1:29,0:28:1.67:438,2,0	1/1:16,0:16:27.09:347,27,0	1/1:18,0:18:17.92:187,18,0	1/1:23,0:38:8.97:70,9,0	1/1:20,0:20:36.11:456,36,0	1/1:16,17:33:50.99:735,51,0	1/1:3,13:16:33.10:406,33,0	1/1:29,0:29:57.18:749,57,0	1/1:29,0:29:57.19:989,57,0	1/1:25,0:25:36.08:427,36,0	0/1:45,0:45:99:1134,0,450	1/1:29,0:29:9.03:113,9,0	1/1:23,0:23:10.52:576,11,0	1/1:13,0:13:24.08:357,24,0	1/1:36,0:34:42.06:579,42,0	1/1:16,0:16:27.08:342,27,0	1/1:15,0:15:18.53:300,19,0	1/1:4,0:16:6.02:96,6,0	./.	1/1:18,0:18:20.58:190,21,0	1/1:16,0:16:24.04:303,24,0	1/1:8,11:19:33.05:542,33,0	1/1:24,0:24:31.90:478,32,0	1/1:24,0:24:3.01:39,3,0
chr10	19245032	.	T	TTGG	18061.44	PASS	AB=1.000;AC=51;AF=0.911;AN=56;BaseQRankSum=0.730;DP=378;FS=11.680;HRun=0;HaplotypeScore=111.8275;InbreedingCoeff=0.7893;MQ=63.36;MQ0=2;MQRankSum=-7.862;QD=55.23;ReadPosRankSum=5.154;VQSLOD=6.6484;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,4:8:24.08:510,24,0	1/1:2,4:6:15.05:316,15,0	0/1:25,0:14:4.94:5,0,407	0/0:22,0:11:15.88:0,16,156	1/1:1,12:13:27.09:604,27,0	1/1:1,14:15:45.15:992,45,0	1/1:1,9:10:27.09:617,27,0	0/0:28,0:28:78.24:0,78,1274	1/1:2,10:13:36.12:800,36,0	1/1:1,16:17:51.17:1133,51,0	1/1:1,9:10:27.09:604,27,0	1/1:3,11:14:39.12:822,39,0	1/1:2,11:13:36.12:815,36,0	1/1:0,10:10:30.10:676,30,0	1/1:5,14:19:42.14:966,42,0	1/1:2,9:11:30.10:678,30,0	1/1:4,13:17:45.15:1001,45,0	1/1:2,16:18:45.15:1036,45,0	1/1:2,6:8:24.08:537,24,0	1/1:2,15:17:48.16:1102,48,0	1/1:6,5:10:21.05:369,21,0	1/1:1,3:4:12.04:259,12,0	1/1:0,5:5:15.05:344,15,0	1/1:1,3:4:9.03:185,9,0	1/1:1,8:9:27.09:620,27,0	1/1:3,17:20:57.20:1276,57,0	1/1:1,18:19:51.18:1174,51,0	1/1:0,9:9:27.09:622,27,0
chr10	19245042	.	GTTTTTTTGTGT	G	5751.44	PASS	AB=1.000;AC=35;AF=0.625;AN=56;BaseQRankSum=8.131;DP=383;FS=35.485;HRun=0;HaplotypeScore=197.3802;InbreedingCoeff=-0.0389;MQ=55.17;MQ0=12;MQRankSum=-4.735;QD=23.29;ReadPosRankSum=5.739;VQSLOD=2.2183;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,0:7:14.39:69,14,0	1/1:4,0:4:9.03:172,9,0	0/0:44,0:11:11.87:0,12,98	0/0:39,0:15:15.11:0,15,210	0/1:12,0:12:30.51:150,0,31	1/1:9,4:13:33.05:666,33,0	1/1:6,2:8:17.94:281,18,0	0/0:34,0:31:36.08:0,36,657	1/1:12,0:12:12.64:95,13,0	0/1:17,0:16:99:395,0,124	0/1:12,0:12:79.28:214,0,79	1/1:7,4:11:33.01:592,33,0	0/1:12,0:12:65.79:255,0,66	1/1:8,2:10:18:306,18,0	0/0:17,0:17:42.01:0,42,1188	0/1:6,0:6:51.39:87,0,51	0/1:15,0:14:72.49:115,0,72	0/1:15,0:15:63.70:173,0,64	0/1:8,0:8:46.68:47,0,113	0/1:17,0:17:29.31:235,0,29	0/1:7,0:6:18.97:42,0,19	1/1:0,3:3:9.03:283,9,0	1/1:2,4:5:15.05:406,15,0	1/1:2,1:3:2.99:26,3,0	1/1:5,3:8:23.94:415,24,0	0/1:17,0:17:99:326,0,116	0/1:17,0:17:63.04:360,0,63	0/1:7,0:7:40.62:41,0,72
chr10	19245048	.	T	TG	414.37	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=0.426;DP=364;FS=0.000;HRun=0;HaplotypeScore=146.0650;InbreedingCoeff=0.8047;MQ=52.11;MQ0=17;MQRankSum=-2.775;QD=24.37;ReadPosRankSum=-0.962;VQSLOD=3.5979;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,6:8:17.70:224,18,0	0/0:3,0:3:9.03:0,9,123	0/0:49,0:9:12.88:0,13,177	0/0:42,0:15:11.73:0,12,189	0/0:9,0:9:18.05:0,18,228	0/0:12,0:12:34.44:0,34,280	0/0:8,0:8:13.99:0,14,125	0/0:30,0:27:64.39:0,64,822	1/1:1,8:9:27.05:309,27,0	0/0:16,0:15:45.15:0,45,614	0/0:12,0:12:24.08:0,24,327	0/0:11,0:11:31.82:0,32,271	0/0:10,0:10:26.95:0,27,341	0/0:8,0:8:23.35:0,23,189	0/0:14,0:14:42.14:0,42,577	0/0:6,0:6:18.06:0,18,249	0/0:11,0:10:30.10:0,30,414	0/0:12,0:12:30.10:0,30,416	0/0:12,0:8:24.08:0,24,324	0/0:15,0:15:33.11:0,33,455	0/0:8,0:5:8.06:0,8,95	0/0:3,0:3:8.26:0,8,37	0/0:6,0:5:13.77:0,14,65	0/0:3,0:3:6.01:0,6,61	0/0:8,0:8:20.06:0,20,170	0/0:17,0:16:45.15:0,45,621	0/0:14,0:14:39.13:0,39,527	0/0:6,0:6:17.89:0,18,217
chr10	19245052	.	GT	G	1372.51	PASS	AB=1.000;AC=33;AF=0.589;AN=56;BaseQRankSum=-0.690;DP=361;FS=2.422;HRun=10;HaplotypeScore=138.4231;InbreedingCoeff=0.6646;MQ=51.40;MQ0=23;MQRankSum=-3.463;QD=7.71;ReadPosRankSum=1.423;VQSLOD=1.6307;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,2:10:18.23:136,18,0	0/0:4,0:3:8.39:0,8,39	0/0:50,0:8:10.30:0,10,59	0/0:46,0:15:1.67:0,2,73	0/0:9,0:9:14.20:0,14,75	1/1:11,0:11:5.53:22,6,0	1/1:5,0:5:2.90:11,3,0	0/1:29,0:26:0.33:0,0,11	1/1:2,0:9:20.95:170,21,0	0/0:17,0:15:34.03:0,34,187	0/0:11,0:11:16.97:0,17,90	1/1:10,0:10:3.09:17,3,0	0/0:9,0:9:19.73:0,20,99	0/1:6,0:6:3.95:4,0,15	1/1:4,9:13:35.36:244,35,0	1/1:4,3:7:14.95:123,15,0	1/1:3,8:10:20.97:176,21,0	1/1:5,8:13:26.98:229,27,0	1/1:10,4:9:11.92:95,12,0	1/1:2,10:12:29.79:245,30,0	1/1:6,3:5:5.04:36,5,0	1/1:3,0:3:5.69:16,6,0	1/1:6,0:5:9.34:32,9,0	1/1:2,0:2:0.46:1,0,0	0/1:8,0:7:9.63:10,0,10	0/0:17,0:15:32.10:0,32,192	0/0:14,0:14:25.56:0,26,138	0/0:4,0:5:10.33:0,10,57
chr10	19245053	.	T	TTTG	1018.64	PASS	AB=1.000;AC=14;AF=0.250;AN=56;BaseQRankSum=-0.581;DP=384;FS=1.539;HRun=0;HaplotypeScore=164.0680;InbreedingCoeff=0.7150;MQ=50.30;MQ0=24;MQRankSum=-2.942;QD=15.67;ReadPosRankSum=-0.965;VQSLOD=3.2728;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:27.72:0,28,182	0/0:4,0:3:9.03:0,9,115	0/0:51,0:8:15.98:0,16,96	0/0:47,0:15:26.35:0,26,165	0/0:10,0:10:18.43:0,18,184	1/1:12,3:15:6.04:286,6,0	1/1:5,1:6:11.99:140,12,0	0/0:29,0:26:54.37:0,54,409	0/0:9,0:9:21.33:0,21,155	0/0:17,0:15:45:0,45,490	0/0:11,0:11:18.05:0,18,214	1/1:8,4:12:6.80:221,7,0	0/0:8,0:8:24:0,24,248	1/1:4,3:7:4.94:191,5,0	0/0:13,0:13:36.03:0,36,375	0/0:7,0:7:20.98:0,21,184	0/0:16,0:15:38.53:0,39,325	0/0:14,0:14:33.04:0,33,313	0/0:14,0:9:23.61:0,24,197	0/0:12,0:12:30.04:0,30,283	0/0:9,0:5:5.95:0,6,64	0/1:5,0:5:0.02:83,0,0	1/1:7,1:7:6.51:157,7,0	1/1:1,1:2:3:52,3,0	0/1:10,0:9:6.68:51,0,7	0/0:19,0:17:18.34:0,18,396	0/0:14,0:14:38.97:0,39,413	0/0:5,0:5:12.01:0,12,121
chr10	19245070	.	T	TG	196.26	PASS	AB=0.992;AC=23;AF=0.411;AN=56;BaseQRankSum=-0.907;DP=406;FS=5.254;HRun=0;HaplotypeScore=131.1860;InbreedingCoeff=0.4689;MQ=48.61;MQ0=33;MQRankSum=-1.340;QD=0.97;ReadPosRankSum=-1.101;VQSLOD=1.8139;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:9,0:9:2.27:2,0,59	0/0:4,0:3:8.77:0,9,50	0/1:75,0:14:1.77:2,0,91	0/0:64,0:13:23.64:0,24,113	0/0:11,0:11:23.03:0,23,192	1/1:14,0:14:17.36:77,17,0	1/1:4,1:5:8.79:33,9,0	0/0:27,0:24:58.89:0,59,447	0/0:10,0:10:29.02:0,29,202	0/0:15,0:12:31.56:0,32,178	0/0:7,0:7:14.64:0,15,103	1/1:10,0:10:11.52:61,12,0	0/0:7,0:7:20.58:0,21,162	1/1:4,0:4:6.05:29,6,0	0/0:14,0:14:37.81:0,38,178	0/1:6,0:6:1.22:1,0,80	0/1:15,1:15:25.05:25,0,42	0/1:19,0:19:4.16:4,0,88	0/1:13,0:7:1.98:2,0,51	0/1:10,0:10:25.04:47,0,25	0/0:7,2:6:10.62:0,11,59	1/1:5,0:5:7.87:37,8,0	1/1:10,0:8:4.24:19,4,0	1/1:1,0:1:2.68:11,3,0	1/1:6,0:5:5.13:22,5,0	0/0:17,0:14:36.72:0,37,283	0/0:13,0:13:32.32:0,32,234	0/0:4,0:4:11.63:0,12,84
chr10	19245072	.	T	TG	836.02	PASS	AB=0.797;AC=10;AF=0.179;AN=56;BaseQRankSum=-4.123;DP=394;FS=7.297;HRun=0;HaplotypeScore=122.7682;InbreedingCoeff=0.4212;MQ=50.99;MQ0=33;MQRankSum=0.731;QD=9.39;ReadPosRankSum=0.042;VQSLOD=3.1257;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:8:18.95:0,19,117	0/0:4,0:3:8.52:0,9,43	0/0:73,0:14:7.52:0,8,112	0/0:62,0:14:10.36:0,10,109	0/0:10,0:10:22.25:0,22,117	0/0:12,0:12:23.93:0,24,145	0/0:5,0:5:14.60:0,15,87	0/0:26,0:23:52.58:0,53,416	0/0:10,0:10:28.65:0,29,182	0/0:16,0:13:26.54:0,27,139	0/0:7,0:7:14.36:0,14,81	0/0:8,0:8:17.43:0,17,104	0/0:7,0:7:19.98:0,20,103	0/0:3,0:3:8.72:0,9,50	1/1:8,7:15:37.06:335,37,0	0/1:5,1:6:10.54:47,0,11	1/1:9,7:15:8.53:137,9,0	0/1:6,13:19:9.26:172,0,9	0/1:9,5:8:7.77:125,0,8	0/1:10,0:10:29.11:58,0,29	1/1:6,3:6:11.12:117,11,0	0/0:5,0:5:7.86:0,8,65	0/0:9,0:7:7.51:0,8,57	0/0:1,0:1:2.97:0,3,20	0/0:6,0:5:14.56:0,15,86	0/0:17,0:14:38.39:0,38,205	0/0:14,0:14:33.49:0,33,174	0/0:2,0:2:5.82:0,6,37
chr10	19245203	.	CTTAT	C	1684.48	PASS	AC=24;AF=0.571;AN=42;BaseQRankSum=-4.496;DP=236;FS=2.343;HRun=0;HaplotypeScore=45.2745;InbreedingCoeff=0.5903;MQ=57.39;MQ0=1;MQRankSum=1.657;QD=12.48;ReadPosRankSum=1.538;VQSLOD=2.6048;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:12:17.97:0,18,183	0/0:1,0:3:6.02:0,6,91	./.	./.	0/0:11,0:15:9.01:0,9,101	1/1:11,0:14:3:28,3,0	./.	1/1:23,0:21:15.03:164,15,0	./.	0/0:4,0:5:3.01:0,3,52	0/0:8,0:9:3:0,3,26	1/1:2,0:3:3:28,3,0	0/0:3,0:4:3.01:0,3,49	1/1:4,0:4:3.01:34,3,0	1/1:6,0:6:3.01:47,3,0	1/1:4,1:4:3.01:47,3,0	1/1:11,7:18:33.11:491,33,0	1/1:8,19:27:39.13:598,39,0	1/1:5,5:10:15.05:223,15,0	1/1:2,2:4:6.02:93,6,0	./.	./.	1/1:3,0:4:3:28,3,0	./.	1/1:9,0:17:6:55,6,0	0/0:7,0:7:3.90:0,4,53	0/0:10,0:10:9.03:0,9,133	0/0:18,0:20:12.04:0,12,209
chr10	19245246	.	A	AT	153.08	PASS	AB=0.881;AC=7;AF=0.125;AN=56;BaseQRankSum=1.407;DP=226;FS=4.927;HRun=3;HaplotypeScore=48.4247;InbreedingCoeff=0.0406;MQ=57.98;MQ0=3;MQRankSum=-2.482;QD=3.40;ReadPosRankSum=-0.547;VQSLOD=-0.2033;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:8,0:8:11.69:12,0,99	1/1:3,0:3:5.05:49,5,0	0/0:7,0:6:18.03:0,18,207	0/0:12,0:4:8.98:0,9,111	0/1:7,0:7:64.68:65,0,164	0/0:9,0:9:21:0,21,240	0/0:2,0:2:5.99:0,6,59	0/0:25,0:24:60.19:0,60,775	0/0:2,0:2:3.01:0,3,37	0/0:6,0:6:8.15:0,8,142	0/0:4,0:4:7.26:0,7,77	0/0:4,0:4:11.97:0,12,129	0/0:6,0:6:11.70:0,12,167	0/0:7,0:7:17.53:0,18,183	0/0:5,0:5:12.02:0,12,135	0/0:10,0:9:24.01:0,24,278	0/0:18,0:18:53.61:0,54,493	0/0:20,0:20:41.31:0,41,283	0/0:11,0:11:29.61:0,30,278	0/0:8,0:8:23.94:0,24,259	0/0:4,0:4:12.04:0,12,148	0/0:5,0:5:12.04:0,12,149	0/0:1,0:1:2.94:0,3,18	0/0:4,0:4:12.04:0,12,148	0/0:11,0:11:25.25:0,25,280	0/1:6,2:8:61.17:61,0,198	0/1:2,2:4:62.23:74,0,62	0/1:14,1:14:17.86:18,0,322
chr10	19245269	.	TTGTG	T	1109.13	PASS	AB=0.788;AC=16;AF=0.308;AN=52;BaseQRankSum=1.732;DP=336;FS=4.109;HRun=0;HaplotypeScore=75.3826;InbreedingCoeff=0.1118;MQ=59.09;MQ0=8;MQRankSum=1.162;QD=7.30;ReadPosRankSum=0.315;VQSLOD=1.3460;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:3,1:5:5.74:0,6,36	0/0:20,0:14:9.02:0,9,110	0/0:20,0:12:3.01:0,3,38	0/1:6,1:7:17.88:41,0,18	0/0:12,0:12:21.03:0,21,344	0/0:7,0:12:27.08:0,27,512	0/1:27,0:26:27.99:28,0,108	1/1:0,0:4:12.01:109,12,0	0/0:12,0:12:2.94:0,3,18	0/0:5,0:5:8.43:0,8,65	0/0:11,0:11:18.06:0,18,368	0/1:3,1:9:29.64:74,0,30	0/1:11,0:13:11.38:11,0,507	0/0:3,0:10:9.44:0,9,245	1/1:4,8:13:8.57:269,9,0	0/1:11,6:18:99:210,0,99	0/1:11,3:14:14.94:156,0,15	1/1:12,1:12:6.02:94,6,0	1/1:8,2:11:9.01:117,9,0	./.	0/0:8,0:8:12.03:0,12,209	0/1:3,2:4:81.60:82,0,101	0/0:11,0:12:23.25:0,23,364	0/0:12,0:12:9.03:0,9,178	0/0:13,0:12:5.75:0,6,39	0/0:3,0:3:2.68:0,3,11	0/1:10,2:17:22.43:79,0,22
chr10	19245472	.	A	AC	9996.55	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-6.339;DP=631;FS=1.838;HRun=1;HaplotypeScore=79.1349;InbreedingCoeff=0.9949;MQ=83.63;MQ0=0;MQRankSum=-7.123;QD=39.83;ReadPosRankSum=3.794;VQSLOD=5.5144;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,49:51:99:1977,132,0	0/0:5,0:5:15.05:0,15,195	0/0:25,0:24:69.22:0,69,895	0/0:34,0:34:92.78:0,93,1110	0/0:12,0:12:33.11:0,33,429	0/0:18,0:18:51.17:0,51,662	0/0:31,0:31:90.29:0,90,1169	0/0:33,0:32:96.31:0,96,1247	1/1:0,30:30:81.27:1213,81,0	0/0:15,0:15:42.13:0,42,534	0/0:14,0:14:42.14:0,42,545	0/0:30,0:30:87.28:0,87,1129	0/0:22,0:22:66.18:0,66,827	0/0:27,0:27:81:0,81,1024	1/1:1,21:22:63.21:944,63,0	1/1:0,27:27:75.25:1124,75,0	1/1:1,28:29:72.24:1079,72,0	1/1:0,19:19:54.18:809,54,0	1/1:2,17:19:54.18:802,54,0	1/1:2,11:13:36.11:520,36,0	1/1:2,39:41:99:1528,102,0	0/0:16,0:16:48.16:0,48,622	0/0:16,0:16:48.16:0,48,623	0/0:23,0:23:66.21:0,66,857	0/0:12,0:12:36.12:0,36,467	0/0:25,0:25:72.23:0,72,935	0/0:16,0:16:45.15:0,45,584	0/0:6,0:6:15.05:0,15,195
chr10	19245887	.	C	CA	4831.89	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-0.197;DP=678;FS=1.132;HRun=7;HaplotypeScore=73.5425;InbreedingCoeff=0.9912;MQ=76.24;MQ0=0;MQRankSum=-0.209;QD=29.46;ReadPosRankSum=1.828;VQSLOD=5.4734;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:60,0:60:99:0,156,1500	0/0:12,0:12:36.06:0,36,347	0/0:14,0:14:12.64:0,13,144	0/0:22,0:22:13.91:0,14,301	0/0:40,0:40:99:0,108,1042	0/0:24,0:24:69.11:0,69,666	0/0:19,0:19:42.05:0,42,400	0/0:28,0:28:69.07:0,69,648	0/0:23,0:23:66.11:0,66,637	0/0:31,0:31:87.11:0,87,830	0/0:23,1:24:32.87:0,33,601	0/0:22,0:22:66.09:0,66,631	0/0:23,0:23:66.09:0,66,632	0/0:22,0:22:63.08:0,63,598	1/1:1,26:27:66.20:797,66,0	1/1:1,25:26:63.19:761,63,0	1/1:3,22:25:57.17:689,57,0	1/1:1,25:26:72.22:870,72,0	1/1:4,18:22:54.16:648,54,0	1/1:2,19:21:54.13:632,54,0	1/1:3,14:17:36.11:435,36,0	0/0:16,0:16:45.07:0,45,434	0/0:18,0:18:51.08:0,51,492	0/0:22,0:22:63.10:0,63,608	0/0:22,0:22:63.10:0,63,608	0/0:29,0:29:84.13:0,84,810	0/0:30,0:30:84.11:0,84,801	0/0:13,0:13:33.05:0,33,318
chr10	19246497	.	ATATATGACACAAGTGTGCGAACGAG	A	6891.42	PASS	AB=0.667;AC=13;AF=0.232;AN=56;BaseQRankSum=10.129;DP=738;FS=0.000;HRun=0;HaplotypeScore=447.8511;InbreedingCoeff=0.8323;MQ=79.70;MQ0=0;MQRankSum=-8.144;QD=43.62;ReadPosRankSum=2.571;VQSLOD=2.0264;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:64,0:64:99:0,154,13486	0/0:11,0:11:30.10:0,30,2833	0/0:23,0:23:42.14:0,42,2243	0/0:19,0:19:54.19:0,54,3073	0/0:23,0:23:45.15:0,45,4269	0/0:25,0:25:75.24:0,75,7539	0/0:41,0:41:99:0,100,8174	0/0:36,0:36:75.25:0,75,5056	0/0:21,0:21:57.20:0,57,6170	0/0:32,0:32:81.27:0,81,7520	0/0:20,0:20:57.20:0,57,5849	0/0:31,0:31:72.22:0,72,6573	0/0:30,0:30:66.23:0,66,6072	0/0:37,0:37:78.27:0,78,7029	1/1:4,21:25:36.12:2364,36,0	0/1:15,15:30:99:969,0,330	1/1:13,13:26:12.04:789,12,0	1/1:7,10:17:9.03:592,9,0	1/1:10,8:18:24.03:472,24,0	1/1:8,17:25:29.99:1612,30,0	1/1:17,0:17:4.20:94,4,0	0/0:23,0:23:51.18:0,51,5427	0/0:21,0:21:57.20:0,57,5931	0/0:34,0:34:78.27:0,78,7855	0/0:27,0:27:66.23:0,66,6970	0/0:38,0:38:96.32:0,96,8334	0/0:21,0:21:54.19:0,54,4955	0/0:3,0:3:6.02:0,6,688
chr10	19247703	.	A	AC	1457.36	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=2.367;DP=703;FS=2.165;HRun=1;HaplotypeScore=83.6981;InbreedingCoeff=0.9991;MQ=85.54;MQ0=0;MQRankSum=-5.567;QD=33.89;ReadPosRankSum=1.381;VQSLOD=3.6102;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,26:31:72.24:1072,72,0	0/0:13,0:13:36.07:0,36,429	0/0:31,0:31:87.03:0,87,1003	0/0:17,0:17:42.07:0,42,471	0/0:21,0:21:36.02:0,36,403	0/0:19,0:19:57.14:0,57,718	0/0:26,0:26:75.15:0,75,905	0/0:19,0:19:51.02:0,51,615	1/1:1,11:12:36.10:507,36,0	0/0:23,0:22:65.91:0,66,768	0/0:15,0:15:30.10:0,30,381	0/0:33,0:33:96.26:0,96,1220	0/0:23,0:23:69.22:0,69,894	0/0:33,0:33:99:0,99,1232	0/0:29,0:29:84.27:0,84,1084	0/0:24,0:24:72.19:0,72,901	0/0:44,0:44:99:0,132,1671	0/0:36,0:36:96.19:0,96,1175	0/0:23,0:23:66.10:0,66,787	0/0:21,0:21:47.82:0,48,539	0/0:63,0:63:99:0,180,2234	0/0:23,0:22:51.12:0,51,624	0/0:14,0:13:33.09:0,33,399	0/0:26,0:26:69.18:0,69,841	0/0:21,0:21:45.15:0,45,581	0/0:33,0:33:92.83:0,93,1089	0/0:20,0:20:57.12:0,57,716	0/0:10,0:10:29.99:0,30,347
chr10	19247763	.	C	CGGCTGGCATA	3964.94	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-1.433;DP=672;FS=0.000;HRun=0;HaplotypeScore=196.6232;InbreedingCoeff=0.9835;MQ=82.39;MQ0=0;MQRankSum=-7.263;QD=116.62;ReadPosRankSum=-1.603;VQSLOD=3.5026;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,13:20:39.13:2134,39,0	0/0:9,0:9:27.08:0,27,795	0/0:23,0:22:50.49:0,50,1491	0/0:22,0:22:47.65:0,48,1296	0/0:20,0:20:51.18:0,51,1773	0/0:24,0:24:72.25:0,72,2495	0/0:29,0:29:84.27:0,84,2817	0/0:27,0:27:72.24:0,72,2275	1/1:2,10:14:36.11:1831,36,0	0/0:33,0:33:90.30:0,90,2947	0/0:15,0:15:42.14:0,42,1409	0/0:32,0:32:96.32:0,96,3224	0/0:25,0:25:75.26:0,75,2589	0/0:29,0:29:87.28:0,87,2954	0/0:26,0:26:72.25:0,72,2512	0/0:26,0:26:78.27:0,78,2597	0/0:43,0:43:99:0,126,4295	0/0:24,0:24:72.25:0,72,2500	0/0:21,0:21:60.18:0,60,1922	0/0:17,0:17:45.15:0,45,1474	0/0:48,0:48:99:0,144,4874	0/0:21,0:20:54.19:0,54,1838	0/0:15,0:14:30.10:0,30,1048	0/0:30,0:30:87.30:0,87,2984	0/0:16,0:16:48.14:0,48,1595	0/0:28,0:28:78.27:0,78,2651	0/0:31,0:31:90.29:0,90,2993	0/0:4,0:4:12.04:0,12,377
chr10	19248012	.	CATA	C	3196.60	PASS	AB=0.723;AC=20;AF=0.357;AN=56;BaseQRankSum=5.901;DP=790;FS=9.287;HRun=0;HaplotypeScore=266.2084;InbreedingCoeff=-0.5465;MQ=43.60;MQ0=11;MQRankSum=-7.485;QD=5.94;ReadPosRankSum=4.622;VQSLOD=0.8979;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:50.36:0,50,804	0/1:6,9:12:90.24:90,0,196	0/0:48,0:24:62.80:0,63,1210	0/0:52,0:26:69.10:0,69,1092	0/0:10,8:15:15.05:0,15,352	0/0:12,11:20:32.70:0,33,572	0/1:16,11:26:99:168,0,579	0/0:41,0:39:99:0,108,2288	0/0:28,0:28:68.65:0,69,1065	0/1:16,15:30:99:574,0,877	0/1:6,10:15:32.30:32,0,300	0/1:18,16:30:95.17:95,0,819	0/1:23,8:30:45.16:45,0,778	0/1:13,19:27:75.55:76,0,522	0/1:23,10:32:99:325,0,532	0/1:26,11:37:99:269,0,952	0/1:12,17:26:99:182,0,430	0/1:22,4:24:99:119,0,594	0/1:21,5:24:99:196,0,829	0/1:23,13:35:99:267,0,784	0/1:21,19:36:4.98:5,0,732	0/1:12,7:19:72.54:73,0,449	0/1:9,10:15:38.13:38,0,189	0/1:14,12:21:32.32:32,0,214	0/0:11,8:19:32.29:0,32,557	0/1:18,14:29:99:495,0,920	0/1:12,9:19:99:198,0,725	0/1:7,0:7:78.91:79,0,123
chr10	19248092	.	T	TATACACAC	803.34	PASS	AB=0.960;AC=20;AF=0.370;AN=54;BaseQRankSum=7.520;DP=366;FS=12.931;HRun=0;HaplotypeScore=145.7533;InbreedingCoeff=-0.0816;MQ=48.27;MQ0=4;MQRankSum=-1.470;QD=4.32;ReadPosRankSum=4.979;VQSLOD=1.7552;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:21:7.98:36,8,0	0/1:6,0:6:12.26:121,0,12	0/0:38,0:20:28.53:0,29,679	0/0:7,0:3:0.76:0,1,26	1/1:9,0:9:6.02:94,6,0	0/0:4,0:4:5.98:0,6,48	0/0:9,0:8:8.37:0,8,66	0/0:45,0:45:99:0,129,2601	0/0:14,0:14:2.74:0,3,12	0/1:14,0:14:80.26:80,0,92	0/1:6,0:6:12.55:13,0,18	0/0:13,0:10:14.84:0,15,119	0/1:13,0:13:13.52:14,0,62	0/0:5,0:3:8.97:0,9,71	0/1:1,13:15:0:0,0,0	0/0:10,0:10:14.82:0,15,116	0/1:13,0:11:45.90:46,0,63	0/1:16,0:14:73.40:178,0,73	0/1:15,0:12:77.38:111,0,77	0/0:16,0:16:8.97:0,9,71	1/1:9,0:9:0.47:1,0,0	0/1:8,0:8:11.18:11,0,39	1/1:6,0:5:3.41:19,3,0	./.	0/0:14,0:14:8.88:0,9,73	0/1:9,0:8:42.62:81,0,43	0/1:11,0:10:49.66:79,0,50	0/1:15,0:15:34.53:71,0,35
chr10	19248103	.	A	ACACA	1828.53	PASS	AB=1.000;AC=42;AF=0.808;AN=52;BaseQRankSum=5.678;DP=311;FS=0.000;HRun=0;HaplotypeScore=115.1038;InbreedingCoeff=0.3421;MQ=49.11;MQ0=3;MQRankSum=-1.755;QD=7.88;ReadPosRankSum=1.536;VQSLOD=2.2245;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:21,0:21:2.59:8,0,3	1/1:5,0:5:5.95:98,6,0	0/0:23,0:12:3.04:0,3,234	./.	1/1:11,0:11:8.58:105,9,0	0/1:3,0:3:0:0,0,0	1/1:6,0:5:2.96:19,3,0	0/0:46,0:46:87.22:0,87,1342	1/1:15,0:15:2.03:6,2,0	1/1:12,0:12:23.73:314,24,0	1/1:6,0:6:6.01:75,6,0	1/1:9,0:6:2.99:24,3,0	1/1:11,0:11:6.02:95,6,0	./.	1/1:10,0:10:0.47:1,0,0	1/1:7,0:7:3:25,3,0	0/1:11,0:9:2.33:51,0,2	1/1:12,0:10:3.65:108,4,0	1/1:13,0:10:12.49:121,12,0	0/1:13,0:13:0.11:0,0,0	1/1:6,0:6:3:26,3,0	1/1:6,0:6:3:50,3,0	1/1:7,0:6:6:75,6,0	0/1:3,0:1:0:0,0,0	0/1:13,0:13:0.05:0,0,0	1/1:9,0:8:14.96:182,15,0	1/1:8,0:7:18.04:304,18,0	1/1:8,6:14:15.52:255,16,0
chr10	19248110	.	A	AC	105.17	PASS	AB=0.908;AC=20;AF=0.385;AN=52;BaseQRankSum=3.946;DP=262;FS=4.241;HRun=0;HaplotypeScore=107.2824;InbreedingCoeff=0.1292;MQ=59.13;MQ0=1;MQRankSum=2.901;QD=0.86;ReadPosRankSum=4.818;VQSLOD=1.4486;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:4.50:0,4,16	1/1:3,0:5:2.59:6,3,0	0/0:15,0:10:21.01:0,21,249	0/1:9,0:8:5.58:24,0,6	0/1:13,0:13:11.80:12,0,35	1/1:3,0:3:0.30:1,0,0	0/0:5,0:4:2.90:0,3,16	0/0:38,0:38:99:0,108,1438	0/0:12,0:12:2.80:0,3,13	0/1:11,0:11:12.54:13,0,50	0/0:6,0:6:2.90:0,3,23	0/0:7,0:4:5.76:0,6,33	1/1:7,0:8:1.34:3,1,0	./.	0/0:3,0:3:0:0,0,0	0/0:5,1:6:2.80:0,3,14	0/1:8,1:9:3.84:4,0,36	0/0:11,0:10:16.18:0,16,116	0/1:6,2:7:21.75:22,0,31	0/1:10,2:12:0:0,0,1	0/0:5,1:6:8.76:0,9,62	1/1:6,0:6:1.73:4,2,0	1/1:5,0:5:1.82:5,2,0	./.	0/1:10,0:10:0:0,0,1	0/0:7,0:6:1.91:0,2,41	0/1:6,1:7:10.25:34,0,10	1/1:9,5:14:3.86:99,4,0
chr10	19248112	.	CATATATAT	C	703.09	PASS	AB=0.945;AC=13;AF=0.260;AN=50;BaseQRankSum=-3.398;DP=255;FS=4.531;HRun=0;HaplotypeScore=120.2234;InbreedingCoeff=0.2275;MQ=55.28;MQ0=1;MQRankSum=-1.894;QD=5.49;ReadPosRankSum=-0.933;VQSLOD=2.1164;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:10,8:19:2.79:15,3,0	0/0:5,0:5:3.48:0,3,126	0/0:9,0:5:3:0,3,25	0/0:9,0:7:6.57:0,7,72	0/0:13,0:13:17.78:0,18,429	0/1:3,0:3:0.17:0,0,0	./.	0/1:26,11:38:9.97:649,0,10	1/1:6,4:12:2.84:73,3,0	0/0:11,0:11:15:0,15,360	0/0:6,0:6:3.01:0,3,99	0/0:6,0:3:3.01:0,3,100	1/1:8,0:8:0.38:1,0,0	./.	0/1:4,0:4:0:0,0,0	0/0:7,0:7:0:0,0,0	0/1:9,0:9:9.61:10,0,33	0/1:13,0:11:60.57:61,0,78	0/0:8,0:7:7.21:0,7,92	0/1:10,0:12:0:0,0,0	0/0:4,0:4:1.36:0,1,3	0/0:6,0:6:0:0,0,0	0/0:5,0:5:2.94:0,3,18	./.	0/1:10,0:10:0.02:0,0,0	0/0:7,0:6:5.97:0,6,92	0/0:8,0:7:11.93:0,12,242	0/0:15,0:14:18.06:0,18,560
chr10	19248255	.	GA	G	10356.84	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=5.665;DP=426;FS=25.679;HRun=5;HaplotypeScore=53.7438;InbreedingCoeff=0.9207;MQ=80.61;MQ0=0;MQRankSum=-5.073;QD=28.85;ReadPosRankSum=7.333;VQSLOD=2.7052;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,19:21:54.09:595,54,0	1/1:3,7:10:18.05:204,18,0	0/0:16,0:16:48.14:0,48,599	0/0:10,0:10:28.28:0,28,306	1/1:1,13:14:36.10:408,36,0	1/1:1,13:15:41.15:448,41,0	1/1:0,14:14:42.08:462,42,0	0/0:41,0:41:99:0,108,1463	1/1:1,13:14:30.09:340,30,0	1/1:0,18:18:54.15:612,54,0	1/1:1,9:10:27.04:292,27,0	1/1:1,10:11:21.06:238,21,0	1/1:1,15:16:45.13:510,45,0	1/1:1,7:8:21.06:238,21,0	1/1:1,15:16:36.10:408,36,0	1/1:2,17:19:48.14:544,48,0	1/1:0,10:10:30.09:340,30,0	1/1:3,11:14:33.09:374,33,0	1/1:0,23:22:66.16:736,66,0	1/1:3,18:21:45.13:510,45,0	1/1:1,24:25:60.17:681,60,0	1/1:1,5:6:12.03:136,12,0	1/1:0,2:2:2.88:34,3,0	1/1:0,14:14:36.10:408,36,0	1/1:0,19:19:51.15:578,51,0	1/1:0,15:15:45.13:510,45,0	1/1:1,17:18:48.14:544,48,0	1/1:0,6:6:18.05:204,18,0
chr10	19248770	.	G	GAA	1565.69	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=10.274;DP=752;FS=1.995;HRun=8;HaplotypeScore=94.2163;InbreedingCoeff=0.9974;MQ=78.70;MQ0=0;MQRankSum=-3.246;QD=31.95;ReadPosRankSum=-0.093;VQSLOD=3.6579;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,24:30:69.18:1024,69,0	0/0:16,0:16:42.11:0,42,468	0/0:18,0:18:37.90:0,38,402	0/0:16,0:16:38.68:0,39,403	0/0:32,0:32:87.21:0,87,961	0/0:22,0:22:57.14:0,57,635	0/0:15,0:15:30.05:0,30,325	0/0:34,0:34:57.83:0,58,869	1/1:4,15:19:42.14:663,42,0	0/0:31,0:31:87.22:0,87,955	0/0:32,0:32:68.66:0,69,979	0/0:31,0:31:78.18:0,78,869	0/0:24,0:24:69.17:0,69,758	0/0:25,0:25:66.15:0,66,727	0/0:32,0:32:75.15:0,75,826	0/0:30,1:31:33.56:0,34,813	0/0:35,0:37:93.18:0,93,1095	0/0:19,0:19:42.10:0,42,468	0/0:28,0:28:66.17:0,66,736	0/0:30,0:30:87.24:0,87,969	0/0:22,0:22:54.13:0,54,602	0/0:28,0:29:63.08:0,63,750	0/0:26,0:26:66.17:0,66,735	0/0:27,0:28:63.03:0,63,747	0/0:36,0:36:89.53:0,90,991	0/0:42,0:42:99:0,117,1304	0/0:40,0:40:99:0,105,1171	0/0:7,0:7:21.06:0,21,234
chr10	19249172	.	CA	C	6481.47	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=14.547;DP=681;FS=5.099;HRun=1;HaplotypeScore=155.9530;InbreedingCoeff=0.9998;MQ=83.53;MQ0=0;MQRankSum=-7.819;QD=37.04;ReadPosRankSum=4.842;VQSLOD=4.1884;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,120,1907	1/1:0,10:10:27.09:376,27,0	0/0:25,0:25:75.23:0,75,1179	0/0:16,0:15:45.09:0,45,654	1/1:0,31:31:78.26:1087,78,0	0/0:22,0:22:60.13:0,60,842	0/0:24,0:24:63.18:0,63,958	0/0:20,0:20:57.17:0,57,850	0/0:21,0:21:54.17:0,54,840	1/1:1,28:29:87.28:1182,87,0	1/1:2,18:20:39.12:519,39,0	0/0:23,0:23:63.21:0,63,1004	1/1:0,17:17:51.17:704,51,0	0/0:23,0:23:60.18:0,60,913	0/0:34,0:34:78.25:0,78,1219	0/0:28,0:28:72.19:0,72,1104	0/0:32,0:32:90.29:0,90,1408	0/0:27,0:27:81.24:0,81,1246	0/0:15,0:15:45.12:0,45,651	0/0:30,0:30:90.31:0,90,1433	0/0:30,0:30:84.22:0,84,1248	0/0:24,0:24:69.24:0,69,1099	0/0:21,0:21:63.21:0,63,1004	0/0:20,0:20:54.18:0,54,860	0/0:27,0:27:60.19:0,60,937	1/1:0,22:22:66.21:901,66,0	1/1:0,34:34:90.30:1252,90,0	1/1:0,12:12:33.11:460,33,0
chr10	19249232	.	AG	A	11480.59	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-17.503;DP=791;FS=6.597;HRun=6;HaplotypeScore=162.0106;InbreedingCoeff=0.9992;MQ=73.56;MQ0=9;MQRankSum=7.956;QD=25.46;ReadPosRankSum=2.867;VQSLOD=2.9613;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,43:43:99:1224,114,0	0/0:10,0:10:29.32:0,29,201	0/0:77,0:33:39.40:0,39,580	0/0:75,3:39:23.94:0,24,475	0/0:30,0:30:77.76:0,78,465	1/1:0,27:27:69.17:741,69,0	1/1:1,16:17:39.10:419,39,0	1/1:3,24:27:74.19:763,74,0	1/1:1,22:23:51.13:548,51,0	0/0:37,0:37:87.59:0,88,589	0/0:33,0:33:86.49:0,86,498	1/1:1,20:21:42.11:451,42,0	0/0:24,0:24:49.36:0,49,389	1/1:0,16:16:36.09:387,36,0	1/1:1,29:30:63.15:671,63,0	1/1:1,27:28:60.15:645,60,0	1/1:1,27:28:66.17:709,66,0	1/1:3,21:24:60.13:635,60,0	1/1:2,16:18:48.08:497,48,0	1/1:2,30:32:87.06:885,87,0	1/1:1,21:22:51.13:546,51,0	1/1:2,19:21:48.04:490,48,0	1/1:3,19:22:57.14:612,57,0	1/1:1,26:27:72.18:774,72,0	1/1:1,24:25:45.11:484,45,0	0/0:18,0:18:42.33:0,42,274	0/0:24,0:24:66.94:0,67,410	0/0:8,0:8:23.44:0,23,141
chr10	19249241	.	AAAG	A	7717.35	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=5.795;DP=798;FS=0.683;HRun=0;HaplotypeScore=192.4516;InbreedingCoeff=0.9995;MQ=69.90;MQ0=12;MQRankSum=-8.559;QD=43.36;ReadPosRankSum=1.672;VQSLOD=5.6307;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,129,1895	1/1:2,8:10:24.08:396,24,0	0/0:83,0:32:57.81:0,58,919	0/0:90,0:39:63.03:0,63,1061	1/1:5,24:29:78.25:1251,78,0	0/0:26,0:26:69.10:0,69,1031	0/0:16,0:16:45.07:0,45,677	0/0:31,0:31:90:0,90,1353	0/0:23,0:23:60.16:0,60,951	1/1:4,31:35:93.26:1476,93,0	1/1:0,31:31:90.26:1443,90,0	0/0:22,0:22:48.06:0,48,715	1/1:2,23:25:51.17:842,51,0	0/0:17,0:17:41.99:0,42,546	0/0:28,0:28:69.08:0,69,1058	0/0:27,0:27:66.12:0,66,1002	0/0:27,0:27:72.11:0,72,1136	0/0:21,0:21:60.17:0,60,932	0/0:19,0:19:57.19:0,57,1013	0/0:29,0:29:78.13:0,78,1181	0/0:23,0:23:60.12:0,60,855	0/0:19,0:19:54.11:0,54,792	0/0:23,0:23:69.13:0,69,1052	0/0:29,0:29:84.26:0,84,1380	0/0:21,0:21:48.11:0,48,732	1/1:1,15:16:48.16:792,48,0	1/1:3,20:23:66.23:1095,66,0	1/1:1,8:9:27.08:422,27,0
chr10	19250194	.	G	GC	12259.19	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-9.928;DP=815;FS=2.597;HRun=2;HaplotypeScore=119.5696;InbreedingCoeff=0.9998;MQ=81.84;MQ0=0;MQRankSum=1.238;QD=40.33;ReadPosRankSum=1.745;VQSLOD=4.4234;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,59:59:99:2375,166,0	1/1:0,15:15:39.13:562,39,0	0/0:30,0:30:78.03:0,78,876	0/0:18,0:18:54.10:0,54,640	1/1:1,25:26:69.23:993,69,0	0/0:25,0:25:69.19:0,69,829	0/0:29,0:29:81.24:0,81,990	0/0:27,0:27:72.21:0,72,872	1/1:0,33:33:93.31:1339,93,0	1/1:2,22:25:69.23:989,69,0	1/1:0,21:21:57.19:820,57,0	0/0:36,0:36:99:0,105,1300	1/1:0,28:28:81.27:1165,81,0	0/0:31,0:31:90.28:0,90,1115	1/1:1,33:34:93.31:1339,93,0	0/0:38,0:38:99:0,114,1401	0/0:36,0:36:99:0,108,1325	0/0:40,0:40:99:0,120,1441	0/0:27,0:27:78.24:0,78,966	0/0:26,0:26:78.25:0,78,966	0/0:58,0:58:99:0,172,2108	0/0:23,0:23:60.19:0,60,743	0/0:13,0:13:39.12:0,39,483	0/0:36,0:35:81.25:0,81,1004	0/0:18,0:18:51.16:0,51,631	1/1:0,30:30:90.30:1296,90,0	1/1:0,23:23:69.23:993,69,0	1/1:0,10:10:27.09:388,27,0
chr10	19250361	.	AT	A	25104.01	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-7.467;DP=762;FS=3.512;HRun=2;HaplotypeScore=87.9679;InbreedingCoeff=0.9998;MQ=86.06;MQ0=1;MQRankSum=-11.342;QD=35.26;ReadPosRankSum=5.653;VQSLOD=5.0488;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,41:41:99:1363,105,0	1/1:0,14:14:39.13:506,39,0	0/0:29,0:29:84.21:0,84,1133	0/0:21,0:20:53.73:0,54,703	1/1:0,18:18:51.17:661,51,0	1/1:1,21:22:60.19:779,60,0	1/1:0,24:24:60.20:779,60,0	1/1:3,40:43:99:1502,117,0	1/1:0,30:30:90.29:1169,90,0	1/1:0,19:19:57.18:738,57,0	1/1:0,18:18:45.15:584,45,0	1/1:1,29:30:75.24:974,75,0	1/1:0,34:34:87.28:1130,87,0	1/1:0,23:23:57.19:740,57,0	1/1:0,34:34:99:1286,99,0	1/1:0,31:31:75.24:974,75,0	1/1:0,26:26:75.24:974,75,0	1/1:0,25:25:66.21:857,66,0	1/1:0,30:30:90.25:1149,90,0	1/1:2,27:29:78.25:1013,78,0	1/1:1,53:54:99:1909,147,0	1/1:1,29:30:87.28:1130,87,0	1/1:0,21:21:63.20:818,63,0	1/1:0,35:35:87.28:1130,87,0	1/1:0,13:13:39.13:506,39,0	1/1:1,32:33:90.27:1148,90,0	1/1:1,23:24:66.21:857,66,0	1/1:0,11:11:33.11:429,33,0
chr10	19254092	.	AGTGTGTGTGTGTGTGTGTGTGTGT	A	12975.72	PASS	AB=0.617;AC=27;AF=0.482;AN=56;BaseQRankSum=10.565;DP=772;FS=0.490;HRun=0;HaplotypeScore=373.1607;InbreedingCoeff=0.6303;MQ=53.94;MQ0=25;MQRankSum=-5.708;QD=35.84;ReadPosRankSum=-0.169;VQSLOD=2.4152;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:24:44.76:0,45,2022	1/1:1,7:8:9.03:565,9,0	0/0:55,0:11:2.42:0,2,117	0/0:65,0:14:2.11:0,2,108	1/1:9,23:33:9.03:528,9,0	1/1:6,1:15:9.03:435,9,0	0/1:19,0:39:13.11:205,0,13	0/0:25,0:21:33.10:0,33,1300	0/0:22,0:26:54.13:0,54,2629	1/1:7,18:25:14.11:1276,14,0	1/1:4,14:18:9.03:515,9,0	1/1:11,1:28:5.35:564,5,0	1/1:6,34:40:45.15:2779,45,0	1/1:7,0:26:22.06:1240,22,0	0/0:18,0:31:56.36:0,56,2353	0/0:18,0:40:59.11:0,59,2741	0/0:18,0:25:33:0,33,1172	0/0:25,0:32:45.09:0,45,1583	0/0:10,0:12:18.06:0,18,634	0/0:11,0:21:35.43:0,35,1580	0/0:28,0:41:18.30:0,18,660	1/1:8,0:17:3.01:127,3,0	0/0:5,0:13:1.87:0,2,9	0/1:10,0:28:5.40:122,0,5	0/1:5,1:17:14.59:926,0,15	1/1:9,17:26:4.66:1449,5,0	1/1:9,17:26:18.06:1109,18,0	1/1:4,10:14:18.06:1136,18,0
chr10	19254208	.	C	CATGT	2208.44	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-7.804;DP=864;FS=8.107;HRun=0;HaplotypeScore=149.9211;InbreedingCoeff=0.9657;MQ=61.69;MQ0=1;MQRankSum=-0.109;QD=34.51;ReadPosRankSum=2.452;VQSLOD=3.4779;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:15,19:36:42.14:1019,42,0	0/0:15,0:15:27.09:0,27,439	0/0:22,0:20:26.92:0,27,381	0/0:21,0:16:10.55:0,11,218	0/0:40,0:40:93.32:0,93,1506	0/0:23,0:23:51.15:0,51,784	0/0:37,0:37:54.18:0,54,867	0/0:36,0:34:47.39:0,47,714	1/1:6,22:28:54.19:1311,54,0	0/0:44,0:44:99:0,102,1658	0/0:19,0:19:33.10:0,33,513	0/0:43,0:43:99:0,99,1582	0/0:35,0:35:66.22:0,66,1049	0/0:33,0:33:75.24:0,75,1196	0/0:38,0:38:87.28:0,87,1368	0/0:44,0:44:99:0,99,1584	0/0:21,0:21:42.13:0,42,659	0/0:22,0:22:51.13:0,51,791	0/0:18,0:18:15.05:0,15,243	0/0:34,0:34:84.29:0,84,1358	0/0:31,0:31:72.23:0,72,1133	0/0:30,0:30:66.21:0,66,1038	0/0:38,0:38:78.25:0,78,1240	0/0:35,0:35:50.96:0,51,828	0/0:37,0:37:81.27:0,81,1293	0/0:36,0:36:75.25:0,75,1194	0/0:41,0:41:99:0,102,1629	0/0:7,0:7:18.06:0,18,293
chr10	19255237	.	A	AGG	1646	PASS	AB=0.769;AC=27;AF=0.563;AN=48;BaseQRankSum=-3.049;DP=155;FS=6.058;HRun=3;HaplotypeScore=39.6709;InbreedingCoeff=-0.1886;MQ=53.48;MQ0=1;MQRankSum=0.177;QD=12.19;ReadPosRankSum=-0.051;VQSLOD=0.1587;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:11,1:13:55.11:55,0,140	1/1:1,0:1:1.82:5,2,0	1/1:5,0:2:2.04:6,2,0	./.	./.	1/1:0,3:4:5.93:70,6,0	1/1:10,0:11:7.24:65,7,0	0/1:6,1:8:45.31:89,0,45	1/1:1,3:7:11.35:208,11,0	0/1:3,5:9:69.03:121,0,69	0/0:1,1:2:0.47:0,0,1	0/1:7,3:10:20.36:98,0,20	0/1:3,3:6:38.56:57,0,39	0/1:8,5:13:33.75:227,0,34	1/1:3,2:5:4.03:97,4,0	0/0:3,0:3:5.88:0,6,48	0/1:4,0:5:32.65:35,0,33	0/0:2,0:2:3.01:0,3,33	0/1:6,0:6:28.54:38,0,29	./.	0/0:2,0:2:2.86:0,3,32	0/1:6,0:6:7.09:50,0,7	0/0:2,0:2:2.59:0,3,37	1/1:1,0:3:2.04:6,2,0	0/1:2,3:5:12.11:91,0,12	0/1:4,6:10:75.94:301,0,76	1/1:5,2:7:14.33:164,14,0	./.
chr10	19260359	.	TCACA	T	863.34	PASS	AB=0.971;AC=35;AF=0.761;AN=46;BaseQRankSum=1.318;DP=635;FS=0.000;HRun=0;HaplotypeScore=108.7875;InbreedingCoeff=0.2368;MQ=66.01;MQ0=10;MQRankSum=-0.092;QD=2.26;ReadPosRankSum=1.502;VQSLOD=1.5511;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:35,0:35:32.38:66,0,32	0/1:3,0:3:0:0,0,0	./.	./.	./.	1/1:10,0:16:2.99:24,3,0	1/1:27,0:28:10.63:60,11,0	0/0:24,0:23:0:0,0,0	1/1:19,0:28:8.80:80,9,0	./.	1/1:10,3:13:3.01:46,3,0	1/1:18,0:18:3.01:46,3,0	1/1:22,0:27:6:54,6,0	1/1:17,0:17:3.01:44,3,0	0/0:23,0:24:11.77:0,12,165	1/1:12,0:17:10.72:71,11,0	1/1:25,0:25:0.45:1,0,0	1/1:15,0:15:3:28,3,0	1/1:15,0:15:2.60:10,3,0	./.	0/0:43,0:42:3.30:0,3,22	1/1:26,0:25:5.60:53,6,0	1/1:20,1:21:3.01:45,3,0	1/1:24,6:29:15.52:223,16,0	0/1:19,2:20:17.36:42,0,17	0/0:29,0:29:2.94:0,3,44	1/1:18,2:18:3.01:46,3,0	1/1:5,1:5:3.01:46,3,0
chr10	19263475	.	AT	A	2501.04	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-0.135;DP=633;FS=13.054;HRun=12;HaplotypeScore=77.5822;InbreedingCoeff=0.9167;MQ=76.69;MQ0=0;MQRankSum=0.663;QD=15.16;ReadPosRankSum=1.058;VQSLOD=3.3799;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,4:40:72.74:0,73,889	0/0:3,0:8:14.84:0,15,88	0/0:23,0:21:23.13:0,23,218	0/0:18,0:14:4.59:0,5,47	0/0:8,0:31:57.64:0,58,320	0/0:26,2:28:51.90:0,52,702	0/0:11,0:11:4.10:0,4,220	1/1:9,23:32:65.65:505,66,0	0/0:21,2:23:10.58:0,11,453	0/0:6,0:25:56.98:0,57,301	0/0:1,0:19:51.30:0,51,273	0/0:25,0:25:59.86:0,60,573	0/0:3,0:20:43.13:0,43,252	0/0:13,0:13:27.05:0,27,274	0/0:31,0:31:76.91:0,77,744	1/1:3,23:27:64.79:493,65,0	1/1:4,15:19:44.82:348,45,0	1/1:2,20:22:50.79:395,51,0	1/1:6,11:17:29.81:228,30,0	1/1:3,23:28:57.78:425,58,0	1/1:4,16:20:21.74:302,22,0	0/0:22,0:23:27.89:0,28,442	0/0:19,1:20:9.79:0,10,268	0/0:18,3:21:7.67:0,8,434	0/0:22,0:22:54.10:0,54,542	0/0:8,0:26:48.73:0,49,270	0/0:2,0:27:62.66:0,63,328	0/0:3,0:14:25.73:0,26,145
chr10	19263744	.	G	GGTGCCAT	2046.95	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.487;DP=652;FS=0.000;HRun=0;HaplotypeScore=152.6098;InbreedingCoeff=0.9970;MQ=91.43;MQ0=0;MQRankSum=-6.671;QD=66.03;ReadPosRankSum=1.021;VQSLOD=3.5177;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:51.17:0,51,1186	0/0:10,0:10:26.76:0,27,581	0/0:31,0:31:54.14:0,54,1122	0/0:29,0:28:47.51:0,48,909	0/0:26,0:26:66.23:0,66,1569	0/0:20,0:20:48.16:0,48,1141	0/0:39,0:39:87.30:0,87,1945	0/0:33,0:33:63.20:0,63,1375	0/0:15,0:15:36.12:0,36,856	0/0:32,0:32:75.25:0,75,1715	0/0:15,0:15:30.10:0,30,713	0/0:21,0:21:45.14:0,45,1024	0/0:22,0:22:57.20:0,57,1316	0/0:26,0:26:69.22:0,69,1594	1/1:12,19:31:57.20:2142,57,0	0/0:25,0:25:63.22:0,63,1495	0/0:18,0:18:30.10:0,30,713	0/0:15,0:15:36.12:0,36,842	0/0:17,0:17:30.07:0,30,621	0/0:23,0:23:57.18:0,57,1281	0/0:30,0:30:72.23:0,72,1636	0/0:22,0:22:45.15:0,45,1033	0/0:14,0:14:39.13:0,39,927	0/0:21,0:21:48.15:0,48,1068	0/0:25,0:25:63.22:0,63,1498	0/0:25,0:25:53.21:0,53,1197	0/0:21,0:21:45.14:0,45,998	0/0:16,0:16:48.16:0,48,1141
chr10	19264825	.	GGAGAGAGAGAGAGAGAGAGA	G	4341.52	PASS	AB=0.750;AC=19;AF=0.339;AN=56;BaseQRankSum=8.608;DP=584;FS=32.965;HRun=0;HaplotypeScore=263.1421;InbreedingCoeff=0.3420;MQ=72.59;MQ0=17;MQRankSum=-7.325;QD=19.47;ReadPosRankSum=0.827;VQSLOD=2.2736;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:26:30.10:0,30,2350	0/1:4,0:12:94.38:140,0,94	0/0:47,0:25:6.02:0,6,163	0/0:53,0:17:0:0,0,0	0/1:17,0:19:42.62:43,0,564	1/1:14,9:24:6.02:300,6,0	0/1:9,9:18:7.95:468,0,8	0/0:27,0:26:51.17:0,51,2435	0/0:13,0:21:36.59:0,37,1942	0/0:19,0:24:26.16:0,26,825	0/1:12,0:16:99:165,0,519	1/1:11,7:18:15.05:801,15,0	0/1:12,0:20:78.89:79,0,243	1/1:11,4:15:6.02:308,6,0	0/0:20,0:21:21.05:0,21,1450	0/0:12,0:20:18.53:0,19,984	0/0:29,0:28:45.15:0,45,3202	0/0:26,0:26:42.10:0,42,2670	0/0:23,0:21:39.13:0,39,2183	0/0:18,0:17:18.53:0,19,1157	0/0:12,0:12:21.04:0,21,1113	1/1:10,5:15:6.02:321,6,0	1/1:9,2:12:17.91:537,18,0	0/1:12,1:13:99:154,0,189	1/1:6,11:17:18.06:954,18,0	0/0:9,0:9:15.05:0,15,367	0/1:13,0:21:69.97:70,0,224	0/0:4,0:3:3.01:0,3,80
chr10	19265078	.	GA	G	4580.18	PASS	AB=0.794;AC=32;AF=0.571;AN=56;BaseQRankSum=-2.330;DP=582;FS=28.419;HRun=11;HaplotypeScore=112.6104;InbreedingCoeff=0.8143;MQ=70.79;MQ0=4;MQRankSum=-2.979;QD=13.63;ReadPosRankSum=3.876;VQSLOD=3.1325;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:16,1:18:38.92:0,39,390	1/1:3,3:5:8.99:74,9,0	0/1:34,1:19:18.47:18,0,159	0/0:39,0:21:25.77:0,26,209	1/1:10,22:31:38.84:465,39,0	1/1:6,18:24:47.93:394,48,0	1/1:1,14:15:35.96:296,36,0	0/0:26,1:26:47.31:0,47,674	0/0:19,1:21:26.21:0,26,425	1/1:6,5:11:17.93:148,18,0	1/1:2,9:11:29.95:246,30,0	1/1:3,13:16:32.95:271,33,0	1/1:9,11:20:32.89:266,33,0	1/1:7,12:19:10.95:246,11,0	0/0:25,0:25:57.10:0,57,595	0/0:21,0:21:48.09:0,48,486	0/0:25,0:25:57.12:0,57,597	0/0:18,0:18:33.02:0,33,324	0/0:18,2:20:4.67:0,5,433	0/0:16,0:19:41.52:0,42,358	0/0:11,0:11:30.07:0,30,314	1/1:7,16:23:15.92:337,16,0	1/1:4,12:17:37.97:301,38,0	1/1:5,26:31:65.88:542,66,0	1/1:3,24:27:32.05:462,32,0	0/1:11,14:25:11.76:318,0,12	1/1:10,5:15:14.86:123,15,0	1/1:5,3:8:9.45:74,9,0
chr10	19265095	.	G	GAAA	1284.42	PASS	AB=0.968;AC=9;AF=0.161;AN=56;BaseQRankSum=4.865;DP=655;FS=1.973;HRun=4;HaplotypeScore=155.9118;InbreedingCoeff=0.0833;MQ=69.33;MQ0=7;MQRankSum=-7.522;QD=9.05;ReadPosRankSum=-0.023;VQSLOD=-0.2649;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:60.19:0,60,863	0/1:6,0:5:28.44:28,0,76	0/0:66,0:28:29.98:0,30,590	0/0:60,0:31:11.55:0,12,335	0/1:30,1:30:99:328,0,175	0/0:21,0:21:45.14:0,45,687	0/0:17,0:17:48.15:0,48,711	0/0:42,0:41:99:0,112,1308	0/0:20,0:20:50.92:0,51,750	0/1:18,0:18:11.05:182,0,11	0/1:11,0:11:40.58:76,0,41	0/0:18,0:18:42.12:0,42,617	0/1:24,0:24:99:107,0,154	0/0:18,0:18:54.17:0,54,799	0/0:22,0:22:60.16:0,60,833	0/0:21,0:21:44.32:0,44,333	0/0:24,0:24:49.34:0,49,385	0/0:18,0:18:24.18:0,24,215	0/0:20,0:21:16.03:0,16,250	0/0:19,0:19:23.96:0,24,331	0/0:10,0:10:26.45:0,26,199	0/0:19,0:19:48.13:0,48,673	0/0:20,0:20:54.15:0,54,791	0/0:27,0:27:60.13:0,60,875	0/0:25,0:24:72.19:0,72,1017	0/1:24,0:24:99:164,0,141	1/1:12,9:22:23.67:500,24,0	0/1:4,0:5:29.02:44,0,29
chr10	19265100	.	C	CAAA	7397.62	PASS	AB=0.856;AC=31;AF=0.554;AN=56;BaseQRankSum=-6.334;DP=678;FS=0.000;HRun=10;HaplotypeScore=140.0808;InbreedingCoeff=0.7384;MQ=70.20;MQ0=7;MQRankSum=-3.455;QD=16.48;ReadPosRankSum=-3.095;VQSLOD=1.7051;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:3,0:24:52.28:0,52,320	1/1:4,2:5:6.02:115,6,0	0/1:70,1:29:39.56:40,0,393	0/1:57,0:29:53.13:53,0,168	1/1:10,24:34:60.64:1067,61,0	0/0:20,0:21:54:0,54,606	0/0:18,0:18:48.11:0,48,567	0/1:15,0:45:43.30:118,0,43	0/0:2,0:21:46.80:0,47,284	1/1:1,15:21:60.08:925,60,0	1/1:3,8:14:36.04:541,36,0	0/0:18,0:18:45.06:0,45,519	1/1:9,16:26:24.04:422,24,0	0/0:21,0:21:54.07:0,54,618	0/0:2,0:22:52.69:0,53,313	1/1:3,0:20:38.93:283,39,0	1/1:9,0:25:32.85:279,33,0	1/1:2,1:18:3.37:255,3,0	1/1:4,1:20:50.87:447,51,0	1/1:6,1:20:40.13:367,40,0	1/1:2,0:10:23.91:183,24,0	0/0:14,0:16:33.23:0,33,397	0/0:20,0:20:51.11:0,51,604	0/0:21,0:22:52.55:0,53,653	0/0:26,0:25:63.15:0,63,743	1/1:10,14:26:63.13:1039,63,0	1/1:17,7:25:64.75:1132,65,0	1/1:4,1:5:8.99:131,9,0
chr10	19265605	.	CA	C	3716.96	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=11.233;DP=795;FS=3.510;HRun=2;HaplotypeScore=76.4003;InbreedingCoeff=0.9957;MQ=77.53;MQ0=0;MQRankSum=-2.854;QD=35.74;ReadPosRankSum=3.431;VQSLOD=4.3781;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,38:38:99:1401,108,0	0/0:7,0:7:21.07:0,21,314	0/0:18,0:18:47.70:0,48,657	0/0:19,0:19:48.05:0,48,640	0/0:31,0:31:93.28:0,93,1335	0/0:27,0:27:78.26:0,78,1164	0/0:23,0:23:69.23:0,69,1032	0/0:34,0:34:96.28:0,96,1357	1/1:0,28:28:84.27:1090,84,0	0/0:27,0:27:75.24:0,75,1092	0/0:17,0:17:51.15:0,51,725	0/0:39,0:39:99:0,114,1700	0/0:27,0:27:81.26:0,81,1193	0/0:35,0:35:99:0,102,1486	1/1:1,37:38:96.24:1225,96,0	0/0:29,0:29:87.28:0,87,1278	0/0:34,0:34:99:0,102,1420	0/0:27,0:27:78.25:0,78,1146	0/0:25,0:25:69.23:0,69,1024	0/0:22,0:22:63.20:0,63,913	0/0:59,0:59:99:0,172,2473	0/0:37,0:37:99:0,111,1637	0/0:22,0:22:66.21:0,66,968	0/0:43,0:43:99:0,129,1885	0/0:19,0:19:57.17:0,57,827	0/0:37,0:37:99:0,108,1579	0/0:27,0:26:81.27:0,81,1206	0/0:6,0:6:18.06:0,18,270
chr10	19267039	.	T	TC	21152.97	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-4.206;DP=696;FS=2.524;HRun=3;HaplotypeScore=87.1030;InbreedingCoeff=0.9932;MQ=97.24;MQ0=0;MQRankSum=-12.467;QD=35.37;ReadPosRankSum=8.192;VQSLOD=3.9969;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,30:36:69.06:876,69,0	1/1:0,10:10:30.10:420,30,0	0/0:34,0:34:87.25:0,87,1027	0/0:39,0:38:98.04:0,98,1098	1/1:1,23:24:66.20:905,66,0	1/1:1,23:24:66.22:916,66,0	1/1:4,40:44:99:1428,102,0	0/0:25,0:25:69.21:0,69,828	1/1:3,17:20:54.13:711,54,0	1/1:2,28:30:84.28:1172,84,0	1/1:3,12:15:42.13:570,42,0	1/1:0,20:20:54.18:756,54,0	1/1:0,26:26:72.24:1007,72,0	1/1:1,34:35:93.31:1300,93,0	1/1:4,30:34:90.20:1193,90,0	1/1:1,21:22:60.20:840,60,0	1/1:2,36:38:96.32:1344,96,0	1/1:1,16:17:48.16:672,48,0	1/1:2,22:24:69.16:908,69,0	1/1:0,15:15:33.11:462,33,0	1/1:0,46:46:99:1511,108,0	1/1:0,8:8:24.08:336,24,0	1/1:1,14:15:39.13:546,39,0	1/1:1,31:32:78.26:1092,78,0	1/1:0,18:18:51.17:713,51,0	1/1:2,22:24:60.18:802,60,0	1/1:1,14:15:33.11:462,33,0	1/1:0,5:5:15.05:210,15,0
chr10	19267047	.	TG	T	2867.56	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=6.701;DP=693;FS=4.158;HRun=1;HaplotypeScore=146.5064;InbreedingCoeff=0.9939;MQ=94.61;MQ0=0;MQRankSum=-12.601;QD=30.51;ReadPosRankSum=-0.138;VQSLOD=3.2395;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,40:42:69.23:963,69,0	0/0:10,0:10:30.10:0,30,480	0/0:32,0:32:96.28:0,96,1447	0/0:36,0:35:99:0,104,1543	0/0:24,0:24:72.23:0,72,1109	0/0:22,0:22:63.21:0,63,1007	0/0:44,0:44:99:0,117,1823	0/0:22,0:22:66.21:0,66,1014	1/1:0,19:19:57.19:795,57,0	0/0:30,0:30:90.29:0,90,1398	0/0:17,0:17:48.16:0,48,765	0/0:23,0:23:66.23:0,66,1055	0/0:30,0:30:87.30:0,87,1391	0/0:33,0:33:96.33:0,96,1535	1/1:0,32:33:90.30:1253,90,0	0/0:23,0:23:66.23:0,66,1053	0/0:39,0:39:99:0,114,1793	0/0:20,0:20:60.18:0,60,926	0/0:24,0:24:72.17:0,72,1099	0/0:13,0:13:36.12:0,36,575	0/0:38,0:38:99:0,105,1678	0/0:10,0:10:30.09:0,30,457	0/0:15,0:15:39.13:0,39,624	0/0:29,0:29:78.27:0,78,1245	0/0:23,0:23:66.20:0,66,1029	0/0:23,0:23:69.24:0,69,1100	0/0:14,0:14:35.99:0,36,575	0/0:5,0:5:15.05:0,15,240
chr10	19268801	.	C	CCACA	4593.20	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=1.270;DP=767;FS=5.536;HRun=0;HaplotypeScore=122.0548;InbreedingCoeff=0.9925;MQ=77.57;MQ0=0;MQRankSum=-4.774;QD=45.93;ReadPosRankSum=2.923;VQSLOD=5.3194;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,25:30:48.16:1246,48,0	0/0:7,0:7:21.07:0,21,377	0/0:22,0:21:42.14:0,42,753	0/0:27,0:26:59.41:0,59,1014	0/0:33,0:33:84.29:0,84,1509	0/0:26,0:24:69.24:0,69,1240	0/0:29,0:29:81.25:0,81,1391	0/0:30,0:30:78.23:0,78,1312	1/1:2,25:29:63.22:1634,63,0	0/0:20,0:20:60.18:0,60,1000	0/0:25,0:25:60.16:0,60,1001	0/0:29,0:29:81.12:0,81,1455	0/0:32,0:32:78.27:0,78,1402	0/0:30,0:30:78.27:0,78,1385	1/1:3,34:39:66.23:1713,66,0	0/0:46,0:46:99:0,114,2005	0/0:38,0:38:99:0,102,1832	0/0:21,0:21:48.08:0,48,855	0/0:23,0:23:57.19:0,57,1002	0/0:19,0:19:51.16:0,51,875	0/0:41,0:41:99:0,114,2011	0/0:23,0:23:63.20:0,63,1090	0/0:24,0:24:69.21:0,69,1181	0/0:33,0:33:81.28:0,81,1448	0/0:21,0:21:60.21:0,60,1079	0/0:36,1:37:26.88:0,27,1732	0/0:26,0:26:66.21:0,66,1140	0/0:5,0:5:15.05:0,15,262
chr10	19269777	.	GA	G	1346.89	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.505;DP=697;FS=3.407;HRun=7;HaplotypeScore=66.0472;InbreedingCoeff=0.9998;MQ=80.22;MQ0=0;MQRankSum=-2.198;QD=22.83;ReadPosRankSum=1.099;VQSLOD=3.9167;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,28:30:75.17:765,75,0	0/0:17,0:17:51.16:0,51,642	0/0:18,0:18:41.28:0,41,504	0/0:19,0:19:41.99:0,42,475	0/0:27,0:27:78.23:0,78,952	0/0:26,0:26:72.21:0,72,881	0/0:25,0:25:54.13:0,54,640	0/0:47,0:47:99:0,120,1497	1/1:5,24:29:69.15:704,69,0	0/0:26,0:26:69.21:0,69,854	0/0:28,0:28:75.23:0,75,930	0/0:25,0:25:72.23:0,72,906	0/0:28,0:28:84.25:0,84,1042	0/0:23,0:23:60.18:0,60,743	0/0:21,0:21:60.19:0,60,755	0/0:35,0:35:99:0,99,1234	0/0:23,0:23:66.21:0,66,830	0/0:20,0:20:51.14:0,51,625	0/0:22,0:22:57.16:0,57,693	0/0:31,0:31:78.24:0,78,970	0/0:20,0:20:54.16:0,54,665	0/0:20,0:20:54.17:0,54,679	0/0:20,0:20:57.18:0,57,711	0/0:25,0:25:69.17:0,69,826	0/0:20,0:20:60.18:0,60,742	0/0:31,0:31:84.24:0,84,1021	0/0:29,0:29:84.24:0,84,1030	0/0:12,0:12:33.08:0,33,388
chr10	19270329	.	G	GAAAA	21727.14	PASS	AB=0.766;AC=52;AF=0.929;AN=56;BaseQRankSum=-5.263;DP=790;FS=2.134;HRun=10;HaplotypeScore=162.5384;InbreedingCoeff=0.5045;MQ=67.73;MQ0=4;MQRankSum=-5.286;QD=29.24;ReadPosRankSum=1.174;VQSLOD=1.8479;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,24:34:60.21:1336,60,0	1/1:4,0:14:18.03:314,18,0	0/0:45,0:31:9.29:0,9,373	0/1:28,0:20:3.99:4,0,262	1/1:17,0:32:63.12:1038,63,0	1/1:9,15:24:42.14:923,42,0	1/1:10,9:19:14.73:290,15,0	0/1:13,0:41:34.63:35,0,53	1/1:13,17:31:54.18:1171,54,0	1/1:19,0:34:66.16:1050,66,0	1/1:10,1:17:42.12:703,42,0	1/1:11,23:38:51.04:1018,51,0	1/1:9,3:32:54.18:1048,54,0	1/1:9,12:21:24.08:557,24,0	1/1:9,0:33:62.84:690,63,0	1/1:9,13:27:45.15:935,45,0	1/1:15,23:40:60.20:1343,60,0	1/1:4,15:21:31.28:727,31,0	1/1:12,10:24:45.14:821,45,0	1/1:8,19:31:72.18:1390,72,0	1/1:7,8:19:27.09:522,27,0	1/1:9,13:22:29.97:600,30,0	1/1:11,16:29:45.06:884,45,0	1/1:8,21:30:42.06:839,42,0	1/1:3,20:25:51.17:1101,51,0	1/1:15,0:31:78.19:1319,78,0	1/1:12,0:30:49.15:904,49,0	1/1:1,0:6:9.03:167,9,0
chr10	19271587	.	A	AGAG	36651.34	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-9.417;DP=716;FS=16.503;HRun=0;HaplotypeScore=97.6366;InbreedingCoeff=0.9983;MQ=79.77;MQ0=1;MQRankSum=-8.770;QD=57.36;ReadPosRankSum=6.547;VQSLOD=5.6677;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,48:48:99:3058,135,0	1/1:1,8:9:24.08:542,24,0	0/0:20,0:20:51.17:0,51,771	0/0:28,0:28:30.45:0,30,713	1/1:1,28:29:69.24:1559,69,0	1/1:5,20:26:60.16:1310,60,0	1/1:3,29:32:72.25:1631,72,0	0/0:28,0:28:72.22:0,72,1129	1/1:1,20:21:54.19:1223,54,0	1/1:2,20:22:60.21:1359,60,0	1/1:2,20:22:60.21:1356,60,0	1/1:2,26:28:81.28:1830,81,0	1/1:3,25:29:78.27:1720,78,0	1/1:1,30:31:84.29:1902,84,0	1/1:3,15:19:42.14:951,42,0	1/1:2,26:28:72.25:1630,72,0	1/1:7,33:40:99:2351,105,0	1/1:0,25:26:69.24:1563,69,0	1/1:5,17:22:63.22:1372,63,0	1/1:5,23:28:63.22:1413,63,0	1/1:4,33:39:83.80:1846,84,0	1/1:2,17:19:42.14:949,42,0	1/1:0,14:14:36.12:815,36,0	1/1:1,35:36:93.32:2107,93,0	1/1:1,14:17:36.12:815,36,0	1/1:1,27:28:81.24:1788,81,0	1/1:1,16:17:45.15:1018,45,0	1/1:0,9:9:24.08:544,24,0
chr10	19272057	.	A	AT	5591.58	PASS	AB=0.791;AC=20;AF=0.357;AN=56;BaseQRankSum=-2.668;DP=670;FS=5.618;HRun=10;HaplotypeScore=82.4471;InbreedingCoeff=0.6920;MQ=77.51;MQ0=0;MQRankSum=-0.217;QD=17.42;ReadPosRankSum=0.281;VQSLOD=5.4053;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,42:48:89.64:1159,90,0	0/0:9,0:9:20.97:0,21,172	0/0:11,0:13:25.88:0,26,145	0/0:20,0:18:22.94:0,23,157	0/1:25,4:29:23.57:24,0,442	0/0:16,0:16:26.96:0,27,222	0/0:18,0:18:31.11:0,31,350	0/0:29,2:31:42.88:0,43,557	1/1:3,21:24:29.49:519,29,0	0/0:23,0:23:53.92:0,54,442	0/0:24,1:25:33.89:0,34,479	0/0:22,0:22:47.92:0,48,394	0/0:20,0:21:58.95:0,59,471	0/0:23,2:25:30.92:0,31,457	1/1:5,23:29:56.98:590,57,0	1/1:6,13:20:45.41:457,45,0	1/1:2,28:32:77.70:779,78,0	1/1:4,21:26:62.99:654,63,0	1/1:8,16:24:23.42:435,23,0	1/1:7,19:27:38.28:569,38,0	0/1:8,14:22:10.19:313,0,10	0/0:25,0:25:31.21:0,31,418	0/0:16,1:17:15.96:0,16,337	0/1:24,4:28:46.90:47,0,486	0/0:24,1:25:18.87:0,19,358	0/0:26,0:26:47.88:0,48,394	0/0:29,2:31:48.83:0,49,594	0/1:9,2:12:46.93:47,0,137
chr10	19273081	.	TCC	T	3622.74	PASS	AB=0.975;AC=46;AF=0.821;AN=56;BaseQRankSum=-1.086;DP=643;FS=9.473;HRun=3;HaplotypeScore=145.6418;InbreedingCoeff=0.0881;MQ=67.26;MQ0=43;MQRankSum=-0.503;QD=5.88;ReadPosRankSum=-1.056;VQSLOD=-0.7049;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:24,3:26:10.19:163,10,0	0/1:7,0:7:5.44:51,0,5	0/1:120,0:27:1.29:1,0,410	0/1:137,0:38:30.85:31,0,396	1/1:14,0:13:11.57:93,12,0	1/1:16,1:17:5.75:133,6,0	1/1:19,1:20:19.71:210,20,0	0/0:27,0:27:62.26:0,62,832	1/1:13,1:14:14.18:135,14,0	1/1:16,1:17:39.34:284,39,0	1/1:11,1:12:17.45:127,17,0	0/1:18,0:18:20.11:89,0,20	0/1:16,2:18:32:148,0,32	1/1:9,1:10:7.20:80,7,0	1/1:15,0:15:16.07:180,16,0	1/1:16,1:17:7.05:160,7,0	1/1:17,0:16:29.47:217,29,0	1/1:8,0:7:20.56:141,21,0	0/1:8,0:7:8.42:85,0,8	1/1:10,0:10:11.91:92,12,0	1/1:19,0:19:23.51:285,24,0	1/1:17,0:15:23.73:182,24,0	1/1:10,4:14:20.80:156,21,0	0/1:12,0:12:11.30:70,0,11	0/1:9,1:10:4.29:32,0,4	1/1:14,0:13:35.21:227,35,0	1/1:20,0:19:19.20:212,19,0	1/1:2,0:2:5.92:39,6,0
chr10	19273083	.	C	CTCTCTCT	3700.87	PASS	AB=0.950;AC=27;AF=0.482;AN=56;BaseQRankSum=1.525;DP=643;FS=9.533;HRun=0;HaplotypeScore=177.4813;InbreedingCoeff=-0.6084;MQ=65.18;MQ0=44;MQRankSum=-1.462;QD=10.20;ReadPosRankSum=4.189;VQSLOD=1.9052;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:28:62.31:95,0,62	0/1:7,0:7:7.89:8,0,44	0/0:120,0:24:50.43:0,50,690	0/0:130,0:38:55.37:0,55,826	0/1:15,0:14:13.90:14,0,34	0/1:15,1:18:3.72:334,0,4	0/1:17,1:19:8.01:376,0,8	0/0:27,0:27:69.08:0,69,1134	0/1:14,0:15:58.81:237,0,59	0/1:19,0:19:47.86:152,0,48	0/1:12,0:12:35.22:51,0,35	0/1:14,3:17:13.52:442,0,14	0/1:18,0:18:48.62:53,0,49	1/1:7,2:10:5.51:331,6,0	0/1:12,0:15:24.39:179,0,24	0/1:17,0:17:58.76:60,0,59	0/1:18,0:17:59.25:72,0,59	0/1:8,0:7:15.52:16,0,46	0/1:8,0:7:14.87:78,0,15	0/1:10,0:11:26.01:100,0,26	0/1:19,0:19:55.28:55,0,115	0/1:15,2:15:15.62:261,0,16	0/1:12,2:14:19.20:246,0,19	0/1:10,1:12:38.32:114,0,38	1/1:9,1:10:8.53:151,9,0	0/1:14,0:13:36.66:37,0,96	0/1:18,0:18:37.70:226,0,38	0/1:2,0:2:12.26:14,0,12
chr10	19273096	.	CTGCT	C	2574.74	PASS	AB=0.861;AC=24;AF=0.429;AN=56;BaseQRankSum=8.098;DP=653;FS=21.344;HRun=0;HaplotypeScore=151.1224;InbreedingCoeff=-0.6475;MQ=64.35;MQ0=44;MQRankSum=-6.593;QD=5.73;ReadPosRankSum=4.341;VQSLOD=1.2563;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:23,6:28:99:103,0,560	0/1:4,4:8:47.31:47,0,169	0/1:88,0:14:31.70:32,0,138	0/0:128,0:37:34.57:0,35,1023	0/0:8,7:14:11.93:0,12,301	0/1:19,2:21:56:56,0,706	0/1:19,4:23:99:198,0,718	0/0:27,0:27:63.15:0,63,1461	0/0:16,0:16:5.57:0,6,516	0/1:12,9:21:99:399,0,720	0/1:10,2:12:71.61:72,0,280	0/1:14,1:15:99:107,0,338	0/1:11,8:19:41.76:42,0,521	0/1:14,2:16:78.46:78,0,550	0/1:17,0:17:56.27:56,0,723	0/1:13,2:15:99:223,0,313	0/1:21,1:21:42.55:43,0,909	0/1:11,0:10:28.29:28,0,578	0/1:10,2:10:89.47:89,0,347	0/1:5,7:12:74.74:75,0,281	0/1:19,1:20:14.05:14,0,969	0/1:16,0:14:99:128,0,440	0/1:15,5:20:99:168,0,653	0/0:16,0:16:33.11:0,33,846	0/1:10,4:14:81.30:81,0,435	0/1:10,4:13:99:438,0,121	0/1:22,1:22:99:228,0,713	1/1:1,0:1:3:27,3,0
chr10	19273861	.	A	ATCACG	14390.34	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-10.546;DP=701;FS=0.000;HRun=0;HaplotypeScore=127.3573;InbreedingCoeff=0.9973;MQ=76.00;MQ0=0;MQRankSum=-7.747;QD=71.95;ReadPosRankSum=2.075;VQSLOD=6.3960;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:63,0:63:99:0,187,3813	0/0:11,0:11:33.11:0,33,693	0/0:22,0:23:60.21:0,60,1218	0/0:8,0:8:15.01:0,15,200	0/0:22,0:22:63.22:0,63,1308	1/1:7,24:31:66.23:2032,66,0	1/1:3,22:27:63.22:1941,63,0	0/0:30,0:30:78.27:0,78,1594	0/0:27,0:27:81.26:0,81,1662	0/0:23,0:23:63.22:0,63,1323	0/0:20,0:20:48.16:0,48,990	1/1:6,25:32:78.27:2412,78,0	0/0:34,0:34:93.30:0,93,1898	1/1:6,21:27:72.25:2213,72,0	0/0:28,0:28:81.25:0,81,1616	0/0:26,0:26:75.26:0,75,1574	0/0:39,0:39:99:0,108,2242	0/0:17,0:17:48.16:0,48,1007	0/0:23,0:23:63.22:0,63,1323	0/0:20,0:20:54.19:0,54,1120	0/0:22,0:22:60.19:0,60,1222	1/1:8,10:18:39.13:1182,39,0	1/1:6,19:26:57.20:1758,57,0	1/1:3,19:22:51.18:1563,51,0	1/1:4,13:16:42.14:1290,42,0	0/0:23,0:23:66.23:0,66,1376	0/0:29,0:29:81.26:0,81,1595	0/0:13,0:13:39.13:0,39,819
chr10	19274348	.	GA	G	4850.77	PASS	AB=0.695;AC=46;AF=0.821;AN=56;BaseQRankSum=-0.449;DP=629;FS=4.625;HRun=13;HaplotypeScore=103.2504;InbreedingCoeff=0.2138;MQ=71.03;MQ0=0;MQRankSum=-0.711;QD=8.25;ReadPosRankSum=5.745;VQSLOD=4.0920;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:50:65.83:198,66,0	1/1:0,0:8:14.17:47,14,0	0/0:17,0:14:2.49:0,2,109	0/1:14,0:11:7.94:8,0,27	1/1:2,0:34:38.64:113,39,0	1/1:5,13:20:36.38:252,36,0	1/1:5,20:26:17.60:283,18,0	1/1:10,15:26:43.34:307,43,0	1/1:6,0:23:27.22:84,27,0	0/1:11,7:20:27.52:134,0,28	1/1:5,10:15:20.72:150,21,0	0/1:10,17:28:9.61:225,0,10	0/1:8,10:18:7.07:110,0,7	0/1:4,10:15:3.30:133,0,3	0/0:6,0:24:23.61:0,24,116	1/1:3,19:23:46.48:334,46,0	1/1:13,25:38:68.53:503,69,0	1/1:8,18:27:46.64:334,47,0	1/1:5,14:19:35.66:257,36,0	1/1:6,13:19:2.81:188,3,0	1/1:6,12:19:6.64:159,7,0	0/1:6,6:13:60.98:103,0,61	1/1:8,7:16:11.33:144,11,0	1/1:8,28:37:38.92:437,39,0	1/1:2,0:25:38.70:114,39,0	1/1:4,0:25:40.50:119,40,0	1/1:5,0:27:29.16:91,29,0	1/1:0,0:3:6.82:24,7,0
chr10	19275563	.	A	AGGGGAGAC	1056.36	PASS	AB=0.974;AC=7;AF=0.125;AN=56;BaseQRankSum=-3.657;DP=597;FS=1.166;HRun=0;HaplotypeScore=174.7162;InbreedingCoeff=0.7097;MQ=70.43;MQ0=2;MQRankSum=-3.572;QD=12.73;ReadPosRankSum=-3.498;VQSLOD=2.1356;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:7,7:14:6.02:247,6,0	0/0:4,0:4:9.03:0,9,217	0/0:25,0:14:2.19:0,2,6	0/1:36,0:30:27.54:28,0,179	0/0:15,0:15:33.11:0,33,756	0/0:17,0:17:33.03:0,33,624	0/0:35,0:35:54.17:0,54,1268	1/1:12,0:14:10.28:177,10,0	1/1:10,8:18:17.97:740,18,0	0/0:18,0:18:36.12:0,36,728	0/0:18,0:18:24.07:0,24,599	0/0:30,0:30:57.20:0,57,1433	0/0:16,0:16:36.11:0,36,859	0/0:19,0:19:42.14:0,42,1062	0/0:15,0:15:27.08:0,27,597	0/0:18,0:18:42.11:0,42,997	0/0:48,0:48:93.17:0,93,2011	0/0:32,0:32:69.18:0,69,1590	0/0:24,0:24:33.08:0,33,720	0/0:20,0:20:27.09:0,27,616	0/0:39,0:39:57.20:0,57,1397	0/0:13,0:13:18.06:0,18,452	0/0:12,0:12:21.07:0,21,463	0/0:29,0:29:45.11:0,45,1030	0/0:14,0:14:21.07:0,21,496	0/0:23,0:23:36.12:0,36,828	0/0:27,0:27:48.16:0,48,1213	0/0:3,0:3:9.03:0,9,228
chr10	19275796	.	C	CCATGTATAGACA	32948.86	PASS	AB=0.941;AC=35;AF=0.625;AN=56;BaseQRankSum=-8.848;DP=628;FS=0.364;HRun=0;HaplotypeScore=154.5557;InbreedingCoeff=0.9065;MQ=80.49;MQ0=0;MQRankSum=-15.485;QD=76.98;ReadPosRankSum=0.862;VQSLOD=4.8232;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,15:50:45.15:2698,45,0	0/0:5,0:5:9.03:0,9,339	0/0:26,0:26:66.20:0,66,2108	0/0:18,0:18:45.15:0,45,1432	0/0:20,0:20:57.20:0,57,2051	1/1:0,9:22:27.09:1657,27,0	1/1:1,7:19:21.07:1270,21,0	0/0:36,0:36:99:0,99,3151	1/1:0,10:17:30.10:1840,30,0	1/1:2,11:29:76.90:3809,77,0	1/1:0,8:14:24.08:1458,24,0	1/1:1,10:26:36.08:2026,36,0	0/0:28,0:28:81.27:0,81,2863	1/1:0,22:40:63.69:3863,64,0	0/0:30,0:30:90.30:0,90,3164	1/1:2,12:24:33.11:2022,33,0	1/1:0,10:18:27.09:1571,27,0	1/1:1,5:13:15.05:814,15,0	1/1:0,2:19:54.13:1738,54,0	1/1:0,9:21:27.09:1657,27,0	1/1:2,7:26:24.08:1473,24,0	1/1:1,11:15:36.12:2139,36,0	1/1:0,11:21:33.11:1995,33,0	1/1:2,7:22:12.04:643,12,0	0/0:9,0:9:27.08:0,27,786	0/1:30,2:32:99:276,0,2898	0/0:17,0:17:42.14:0,42,1485	0/0:11,0:11:33.10:0,33,1148
chr10	19276273	.	GCATCCGTCCTCATTACACCC	G	25078.13	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=16.225;DP=570;FS=10.116;HRun=0;HaplotypeScore=357.8482;InbreedingCoeff=0.9499;MQ=91.11;MQ0=0;MQRankSum=-16.313;QD=76.93;ReadPosRankSum=6.612;VQSLOD=3.3699;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:15,9:24:27.09:1501,27,0	0/0:9,0:9:27.09:0,27,2255	0/0:26,0:26:63.17:0,63,3555	0/0:32,0:32:87.29:0,87,5042	0/0:24,0:24:69.24:0,69,6287	1/1:6,9:15:21.07:1166,21,0	1/1:11,15:26:39.13:1926,39,0	0/0:24,0:24:72.25:0,72,5143	1/1:7,12:19:33.11:1831,33,0	1/1:11,20:31:60.19:3196,60,0	1/1:6,8:14:18.06:993,18,0	1/1:12,7:19:17.63:870,18,0	0/0:28,0:28:81.28:0,81,6929	1/1:14,25:39:66.23:3674,66,0	0/0:34,0:34:99:0,99,8177	1/1:8,15:23:39.13:2058,39,0	1/1:11,10:21:24.08:1333,24,0	1/1:8,6:14:9.03:373,9,0	1/1:7,4:11:12.04:668,12,0	1/1:6,10:16:21.07:1166,21,0	1/1:5,6:11:6.02:330,6,0	1/1:6,14:20:39.13:2165,39,0	1/1:3,6:10:18.06:1000,18,0	1/1:5,8:13:15.05:829,15,0	0/0:23,0:23:69.24:0,69,6224	0/0:21,0:21:57.15:0,57,4913	0/0:20,0:20:60.18:0,60,4661	0/0:3,0:3:6.02:0,6,574
chr10	19276709	.	T	TA	8509.27	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-4.783;DP=288;FS=1.264;HRun=5;HaplotypeScore=28.9152;InbreedingCoeff=0.7693;MQ=64.23;MQ0=0;MQRankSum=-0.370;QD=31.87;ReadPosRankSum=2.478;VQSLOD=4.6228;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,19:19:48.15:619,48,0	1/1:0,5:5:15.05:197,15,0	0/0:9,0:6:13.81:0,14,112	0/0:12,0:10:14.80:0,15,129	1/1:1,19:20:54.18:711,54,0	1/1:0,7:7:18.06:232,18,0	1/1:1,10:11:24.08:316,24,0	1/1:2,22:24:66.16:835,66,0	1/1:2,2:4:6.02:79,6,0	1/1:1,5:6:15.01:178,15,0	1/1:1,8:9:24.08:316,24,0	1/1:3,0:3:3:28,3,0	1/1:1,7:8:12.04:158,12,0	1/1:1,7:8:21.07:276,21,0	1/1:2,6:8:15.05:191,15,0	1/1:2,5:7:12.04:158,12,0	1/1:1,16:17:39.60:514,40,0	1/1:1,13:13:33.11:434,33,0	1/1:2,8:10:24.08:315,24,0	1/1:0,6:6:18.06:237,18,0	1/1:0,12:12:30.10:395,30,0	1/1:0,3:3:9.03:118,9,0	1/1:1,6:7:18.06:231,18,0	1/1:1,11:12:24.08:315,24,0	1/1:1,18:19:51.17:671,51,0	1/1:0,9:9:27.09:355,27,0	1/1:0,13:13:33.11:434,33,0	1/1:1,4:5:15.05:196,15,0
chr10	19276865	.	TA	T	2403.47	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-6.751;DP=268;FS=16.641;HRun=5;HaplotypeScore=54.0105;InbreedingCoeff=0.8817;MQ=74.61;MQ0=0;MQRankSum=2.733;QD=28.96;ReadPosRankSum=4.089;VQSLOD=2.1214;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:27.09:0,27,368	1/1:1,7:8:18.05:204,18,0	0/0:13,0:10:22.96:0,23,234	0/0:7,0:6:10.57:0,11,53	1/1:0,22:22:66.16:734,66,0	0/0:12,0:12:36.12:0,36,480	0/0:6,0:6:15.05:0,15,205	0/0:26,0:26:69.21:0,69,915	0/0:6,0:6:15.04:0,15,189	0/0:11,0:11:30.05:0,30,376	0/0:9,0:9:21.07:0,21,287	0/0:7,0:7:9.03:0,9,123	1/1:0,4:4:12.03:136,12,0	0/0:11,0:11:29.99:0,30,355	0/0:8,0:8:24.01:0,24,304	0/0:9,0:9:18.02:0,18,211	0/0:7,0:7:21.04:0,21,267	0/0:4,0:4:3.01:0,3,41	0/0:13,0:13:36.10:0,36,475	0/0:8,0:8:18.06:0,18,245	0/0:1,0:1:3.01:0,3,41	0/0:4,0:4:12.04:0,12,156	0/0:4,0:4:8.94:0,9,91	0/0:6,0:6:17.97:0,18,221	1/1:1,12:13:36.10:400,36,0	1/1:2,18:20:54.15:612,54,0	1/1:0,12:12:33.09:374,33,0	1/1:0,4:4:12.03:136,12,0
chr10	19276936	.	AAAAAAC	A	2161.10	PASS	AB=0.978;AC=22;AF=0.393;AN=56;BaseQRankSum=7.146;DP=448;FS=30.390;HRun=0;HaplotypeScore=130.7619;InbreedingCoeff=0.3353;MQ=68.74;MQ0=3;MQRankSum=-8.375;QD=10.44;ReadPosRankSum=6.741;VQSLOD=0.7601;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:34.47:0,34,1015	0/0:8,0:8:24.08:0,24,684	0/0:33,0:17:31.91:0,32,501	0/0:18,0:12:29.52:0,30,320	0/0:20,0:20:60.19:0,60,1466	1/1:15,1:16:29.38:280,29,0	0/1:22,0:22:22.50:218,0,22	0/0:16,0:16:48.07:0,48,947	0/0:12,0:12:26.45:0,26,317	1/1:8,1:9:11.94:170,12,0	0/1:13,1:14:19.33:123,0,19	0/1:12,0:12:8.57:63,0,9	0/0:8,0:8:18.06:0,18,478	0/1:14,2:16:20.29:146,0,20	0/0:18,0:18:48.10:0,48,1123	1/1:18,0:18:10.09:215,10,0	0/1:16,0:16:31.25:104,0,31	0/1:10,0:10:34.37:41,0,34	1/1:11,1:12:5.39:207,5,0	0/1:14,0:14:33.83:147,0,34	1/1:12,1:13:10.54:131,11,0	1/1:12,0:12:26.99:234,27,0	1/1:8,1:9:1.26:125,1,0	0/1:14,0:14:35.92:146,0,36	0/0:21,0:21:60.21:0,60,1648	0/0:21,0:21:33.88:0,34,1349	0/0:27,0:27:81.23:0,81,1994	0/0:7,0:7:18.53:0,19,468
chr10	19276937	.	AAAAAC	A	4761.66	PASS	AB=1.000;AC=31;AF=0.554;AN=56;BaseQRankSum=4.004;DP=423;FS=21.482;HRun=0;HaplotypeScore=107.7198;InbreedingCoeff=0.8591;MQ=69.78;MQ0=3;MQRankSum=-8.161;QD=22.25;ReadPosRankSum=6.560;VQSLOD=2.3865;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:33:12.66:13,0,601	0/0:8,0:8:24.08:0,24,563	0/0:33,0:17:25.19:0,25,410	0/0:18,0:12:29.42:0,29,284	0/0:22,0:22:66.14:0,66,1241	1/1:2,14:16:30.10:520,30,0	1/1:2,16:18:32.94:536,33,0	0/0:16,0:16:47.26:0,47,763	0/0:12,0:12:17.78:0,18,180	1/1:1,7:8:20.96:207,21,0	1/1:3,10:13:21.72:309,22,0	1/1:0,11:11:8.94:162,9,0	0/0:8,0:8:18.05:0,18,383	1/1:3,10:13:14.73:261,15,0	0/0:18,0:18:48.10:0,48,902	1/1:0,17:17:26.91:498,27,0	1/1:7,5:12:20.11:209,20,0	1/1:1,7:8:5.92:111,6,0	1/1:9,1:10:26.95:285,27,0	1/1:1,10:11:20.68:351,21,0	1/1:2,10:12:10.99:168,11,0	1/1:0,11:11:27.09:496,27,0	1/1:1,7:8:17.94:291,18,0	1/1:8,5:13:11.29:344,11,0	0/0:21,0:21:60.20:0,60,1371	0/0:18,1:19:1.73:0,2,1067	0/0:27,0:27:81.15:0,81,1643	0/0:7,0:7:18.51:0,19,388
chr10	19276938	.	AAAAC	A	3478.40	PASS	AB=1.000;AC=32;AF=0.571;AN=56;BaseQRankSum=6.229;DP=411;FS=17.719;HRun=0;HaplotypeScore=102.1042;InbreedingCoeff=0.8202;MQ=68.10;MQ0=3;MQRankSum=-7.565;QD=15.81;ReadPosRankSum=6.676;VQSLOD=1.7923;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:32,0:32:71.57:72,0,242	0/0:8,0:8:24.08:0,24,462	0/0:29,0:14:18.52:0,19,282	0/0:18,0:12:29.29:0,29,229	0/0:21,0:21:60.10:0,60,949	1/1:15,1:16:30:329,30,0	1/1:16,1:17:33.06:379,33,0	0/0:16,0:16:42.65:0,43,610	0/1:12,0:12:10.73:11,0,69	1/1:8,0:8:19.22:163,19,0	1/1:12,1:13:22.27:235,22,0	1/1:11,0:11:8.97:101,9,0	0/0:7,0:7:15.05:0,15,303	1/1:12,0:12:14.82:173,15,0	0/0:18,0:18:48.07:0,48,748	1/1:17,0:17:27.08:313,27,0	1/1:11,0:11:22.85:192,23,0	1/1:7,0:7:6.02:70,6,0	1/1:10,0:10:29.94:263,30,0	1/1:10,0:10:20.85:228,21,0	1/1:12,0:12:10.99:121,11,0	1/1:11,0:11:27.08:311,27,0	1/1:8,0:8:17.95:188,18,0	1/1:12,1:13:31.99:329,32,0	0/0:21,0:21:60.18:0,60,1094	0/0:19,0:19:22.24:0,22,848	0/0:27,0:27:81.11:0,81,1317	0/0:6,0:6:15.52:0,16,294
chr10	19276940	.	AAC	A	2872.41	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=8.365;DP=411;FS=10.241;HRun=0;HaplotypeScore=89.5889;InbreedingCoeff=0.9589;MQ=72.47;MQ0=3;MQRankSum=-6.319;QD=13.24;ReadPosRankSum=7.997;VQSLOD=1.9620;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:25,3:28:53.81:492,54,0	0/0:10,0:10:29.82:0,30,276	0/0:32,0:16:27.76:0,28,272	0/0:18,0:13:24.76:0,25,142	0/0:18,0:18:50.43:0,50,460	1/1:16,0:16:28.93:213,29,0	1/1:17,0:17:32.84:248,33,0	0/0:20,0:20:54.71:0,55,471	1/1:5,6:11:14.58:129,15,0	1/1:8,0:8:17.90:136,18,0	1/1:13,0:13:22.93:153,23,0	1/1:11,0:11:8.92:66,9,0	0/0:8,0:8:17.96:0,18,184	1/1:12,0:12:14.77:115,15,0	0/0:18,0:18:45.07:0,45,335	1/1:17,0:17:26.90:208,27,0	1/1:11,0:11:23.45:170,23,0	1/1:7,0:7:5.98:46,6,0	1/1:11,0:11:32.84:252,33,0	1/1:11,0:11:23.83:184,24,0	1/1:12,0:12:11.87:87,12,0	1/1:11,0:11:26.89:206,27,0	1/1:8,0:8:17.83:129,18,0	1/1:13,0:13:35.40:264,35,0	0/0:21,0:21:56.57:0,57,594	0/0:17,0:17:22.75:0,23,387	0/0:27,0:27:68.95:0,69,643	0/0:5,0:5:14.93:0,15,155
chr10	19276941	.	AC	A	2468.14	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=7.345;DP=389;FS=30.291;HRun=2;HaplotypeScore=82.0953;InbreedingCoeff=0.9413;MQ=74.11;MQ0=2;MQRankSum=-6.631;QD=11.48;ReadPosRankSum=5.399;VQSLOD=0.2721;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:22,3:25:63.85:506,64,0	0/0:8,0:8:20.86:0,21,153	0/0:28,0:16:26.40:0,26,252	0/0:18,0:13:25.93:0,26,157	0/0:17,0:17:29.95:0,30,253	1/1:16,0:16:27.57:158,28,0	1/1:17,0:17:32.18:191,32,0	0/0:18,0:18:44.92:0,45,382	1/1:8,1:9:14.56:108,15,0	1/1:8,0:8:17.71:125,18,0	1/1:13,0:13:21.24:120,21,0	1/1:11,0:11:8.69:49,9,0	0/0:7,0:7:11.97:0,12,102	1/1:12,0:12:14.62:86,15,0	0/0:10,0:10:11.88:0,12,110	1/1:17,0:17:26.32:156,26,0	1/1:12,0:12:26.65:183,27,0	1/1:7,0:7:5.87:35,6,0	1/1:12,0:12:35.74:267,36,0	1/1:11,0:11:23.51:150,24,0	1/1:12,0:12:11.73:70,12,0	1/1:11,0:11:26.30:154,26,0	1/1:8,0:8:17.44:101,17,0	1/1:14,0:14:35.24:229,35,0	0/0:20,0:20:41.95:0,42,372	0/0:17,0:17:15.29:0,15,218	0/0:26,0:26:47.83:0,48,386	0/0:4,0:4:8.96:0,9,79
chr10	19277820	.	A	ATG	3453.63	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=14.551;DP=540;FS=185.341;HRun=0;HaplotypeScore=220.0781;InbreedingCoeff=0.8495;MQ=60.73;MQ0=9;MQRankSum=-14.249;QD=22.28;ReadPosRankSum=-1.523;VQSLOD=-0.3509;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:58:99:0,169,2510	0/0:13,0:13:36.12:0,36,550	0/0:33,0:23:59.85:0,60,824	0/0:24,0:14:35.22:0,35,443	0/0:36,0:36:99:0,102,1515	1/1:9,0:9:14.31:172,14,0	1/1:10,0:10:27.97:333,28,0	0/0:28,0:28:81.25:0,81,1198	0/0:32,0:32:93.28:0,93,1395	1/1:12,2:14:23.84:539,24,0	1/1:10,1:11:8.97:108,9,0	1/1:15,1:16:2.53:274,3,0	0/0:34,0:34:93.30:0,93,1399	1/1:18,0:18:41.86:486,42,0	0/0:43,0:43:99:0,126,1927	1/1:13,1:13:29.92:392,30,0	1/1:9,0:9:25.32:272,25,0	1/1:8,0:8:21.07:304,21,0	1/1:6,0:5:11.71:149,12,0	1/1:12,1:13:20.73:225,21,0	1/1:4,1:5:3.01:43,3,0	0/1:7,0:7:0.58:37,0,1	1/1:7,0:7:6.01:81,6,0	1/1:8,0:8:3.01:39,3,0	0/0:27,0:27:81.24:0,81,1194	0/0:25,0:25:69.23:0,69,1053	0/0:29,0:29:87.30:0,87,1332	0/0:3,0:3:9.03:0,9,138
chr10	19277825	.	GA	G	1154.99	PASS	AC=16;AF=0.364;AN=44;BaseQRankSum=8.299;DP=548;FS=31.041;HRun=1;HaplotypeScore=66.8762;InbreedingCoeff=0.7852;MQ=64.28;MQ0=9;MQRankSum=-7.901;QD=12.83;ReadPosRankSum=-0.628;VQSLOD=0.6586;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:57:99:0,172,2644	0/0:14,0:14:42.12:0,42,645	0/0:33,1:24:72.12:0,72,985	0/0:28,0:18:43.21:0,43,591	0/0:34,0:34:99:0,102,1623	./.	1/1:0,12:12:3.01:41,3,0	0/0:26,0:26:78.26:0,78,1225	0/0:32,0:32:96.31:0,96,1503	1/1:0,15:15:45.13:594,45,0	./.	./.	0/0:32,0:32:93.30:0,93,1461	1/1:0,19:19:3.01:41,3,0	0/0:47,0:47:99:0,141,2156	1/1:0,14:13:3:25,3,0	1/1:0,9:9:3.01:41,3,0	1/1:0,8:8:24.08:322,24,0	1/1:1,5:5:15.05:208,15,0	./.	./.	./.	1/1:0,7:7:3.01:41,3,0	0/0:0,9:9:0.45:0,0,1	0/0:25,0:25:72.20:0,72,1101	0/0:25,0:25:75.25:0,75,1171	0/0:30,0:30:90.31:0,90,1431	0/0:3,0:3:9.03:0,9,144
chr10	19278393	.	T	TCAC	12668.52	PASS	AB=0.702;AC=24;AF=0.429;AN=56;BaseQRankSum=13.277;DP=683;FS=14.885;HRun=0;HaplotypeScore=198.7286;InbreedingCoeff=0.2507;MQ=48.20;MQ0=15;MQRankSum=-9.940;QD=30.82;ReadPosRankSum=2.944;VQSLOD=3.9118;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:21,18:39:99:1162,0,158	0/0:11,0:11:33.10:0,33,487	0/0:39,0:9:20.32:0,20,166	0/0:43,0:15:5.55:0,6,213	0/0:17,0:15:42.10:0,42,585	0/1:7,10:19:10.02:628,0,10	0/1:14,11:25:99:673,0,218	0/0:29,0:28:63.12:0,63,883	1/1:12,11:26:19.80:1181,20,0	0/1:9,5:18:25.11:678,0,25	1/1:6,0:6:10.28:181,10,0	0/1:18,11:33:75.59:936,0,76	0/0:30,0:30:81.20:0,81,1172	0/1:12,15:34:20.90:1374,0,21	0/0:34,0:34:90.29:0,90,1369	0/1:7,12:23:29.54:979,0,30	0/1:12,17:30:24.06:1086,0,24	1/1:7,13:21:26.91:658,27,0	1/1:5,7:11:20.97:353,21,0	1/1:4,2:7:18.06:350,18,0	0/1:34,18:50:61.86:994,0,62	1/1:4,4:8:18.04:314,18,0	1/1:6,4:9:14.83:184,15,0	0/1:24,15:40:62.21:938,0,62	0/0:16,0:16:48.14:0,48,694	0/0:26,0:25:69.23:0,69,1067	0/0:12,0:12:24.08:0,24,371	0/0:15,0:15:34.05:0,34,550
chr10	19278420	.	ACAG	A	3547.28	PASS	AB=0.743;AC=19;AF=0.339;AN=56;BaseQRankSum=14.151;DP=783;FS=20.736;HRun=0;HaplotypeScore=264.5832;InbreedingCoeff=-0.3477;MQ=44.62;MQ0=9;MQRankSum=-14.516;QD=6.22;ReadPosRankSum=-0.468;VQSLOD=1.4472;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:39,9:46:99:230,0,634	0/0:11,0:11:33.10:0,33,630	0/1:45,0:17:3.92:4,0,504	0/1:59,0:25:28.77:29,0,759	0/0:16,0:16:42.14:0,42,882	0/1:11,18:29:99:338,0,123	0/1:25,17:42:99:392,0,698	0/0:26,0:26:78.23:0,78,1364	0/1:12,18:30:99:421,0,109	0/1:20,7:27:99:177,0,560	0/1:3,3:6:5.96:6,0,119	0/1:12,24:35:99:282,0,176	0/0:23,0:23:66.07:0,66,1248	0/1:23,18:41:99:454,0,219	0/0:37,0:37:99:0,107,2027	0/1:11,10:21:99:244,0,156	0/1:20,16:36:99:137,0,346	0/1:15,5:20:79.08:223,0,79	0/0:17,1:14:3.82:0,4,205	0/1:6,5:11:89.49:89,0,156	0/1:44,2:45:88.97:89,0,599	1/1:3,5:8:17.14:119,17,0	0/1:5,9:14:42.58:102,0,43	0/1:26,21:48:99:212,0,179	0/0:27,0:27:75:0,75,1468	0/0:33,0:33:93.30:0,93,1891	0/0:10,0:10:24.05:0,24,443	0/0:12,0:12:36.09:0,36,679
chr10	19278423	.	GCAT	G	2668.48	PASS	AB=0.989;AC=17;AF=0.304;AN=56;BaseQRankSum=17.126;DP=781;FS=16.079;HRun=0;HaplotypeScore=261.3102;InbreedingCoeff=-0.2794;MQ=44.64;MQ0=8;MQRankSum=-14.385;QD=5.73;ReadPosRankSum=-1.680;VQSLOD=1.2276;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:42,3:43:99:231,0,692	0/0:11,0:11:30.09:0,30,615	0/0:48,0:19:11.37:0,11,600	0/0:63,0:30:23.26:0,23,1001	0/0:15,0:15:42.13:0,42,878	0/1:29,0:29:83.61:192,0,84	0/1:42,1:43:99:294,0,680	0/0:27,0:27:66.19:0,66,1267	0/1:29,1:30:89.44:381,0,89	0/1:27,0:27:99:141,0,561	0/0:6,0:6:8.48:0,8,150	0/1:34,0:33:99:230,0,145	0/0:22,0:22:60.17:0,60,1187	0/1:42,0:42:99:317,0,159	0/0:37,0:37:74.86:0,75,1805	0/1:18,0:18:86.37:207,0,86	0/1:35,0:35:99:159,0,212	0/1:22,0:22:45.69:195,0,46	0/1:19,0:16:43.14:43,0,167	0/1:11,0:11:53.80:54,0,209	0/1:43,0:42:41.84:42,0,649	1/1:8,0:8:15.22:97,15,0	0/1:14,0:14:60.40:73,0,60	0/1:44,2:46:93.44:179,0,93	0/0:27,0:27:72.16:0,72,1472	0/0:33,0:33:90.30:0,90,1842	0/0:9,0:9:21.04:0,21,378	0/0:16,0:16:42.13:0,42,810
chr10	19278615	.	AAG	A	12789.90	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=11.073;DP=754;FS=1.060;HRun=0;HaplotypeScore=97.2517;InbreedingCoeff=0.9877;MQ=70.89;MQ0=6;MQRankSum=-0.587;QD=25.94;ReadPosRankSum=5.220;VQSLOD=5.4915;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,43:48:99:1476,117,0	0/0:14,0:14:36.12:0,36,595	0/0:45,0:32:27.50:0,27,574	0/0:33,0:27:46.50:0,46,620	0/0:14,1:15:7.27:0,7,633	1/1:4,22:26:51.16:643,51,0	1/1:6,24:30:63.20:795,63,0	0/0:32,1:33:52.43:0,52,1388	1/1:5,18:23:42.13:530,42,0	1/1:2,26:28:69.22:865,69,0	1/1:1,12:13:33.06:398,33,0	1/1:8,25:32:54.15:681,54,0	0/0:24,0:24:63.20:0,63,1021	1/1:4,28:32:75.24:946,75,0	0/0:19,0:19:48.16:0,48,797	1/1:5,27:32:60.19:757,60,0	1/1:7,47:53:99:1325,105,0	1/1:3,13:16:30.10:379,30,0	1/1:7,18:23:51.14:626,51,0	1/1:3,19:22:54.17:681,54,0	1/1:7,26:32:51.16:643,51,0	1/1:2,19:21:54.17:681,54,0	1/1:3,20:23:45.14:568,45,0	1/1:5,28:33:63.20:795,63,0	0/0:20,0:20:48.16:0,48,798	0/0:32,0:32:75.26:0,75,1243	0/0:13,0:13:30.10:0,30,489	0/0:13,0:13:30.10:0,30,492
chr10	19279600	.	T	TGGC	18715.24	PASS	AB=0.584;AC=50;AF=0.893;AN=56;BaseQRankSum=10.177;DP=488;FS=13.059;HRun=0;HaplotypeScore=222.3870;InbreedingCoeff=0.5735;MQ=86.41;MQ0=0;MQRankSum=-11.358;QD=42.92;ReadPosRankSum=7.669;VQSLOD=4.0430;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,30:38:88.40:1420,88,0	1/1:1,5:7:6.42:291,6,0	0/0:29,0:29:73.45:0,73,1299	0/0:23,0:22:57.11:0,57,1012	1/1:4,18:22:42.19:805,42,0	1/1:3,12:15:36.11:605,36,0	1/1:0,14:14:42.14:737,42,0	1/1:5,12:17:45.15:831,45,0	1/1:4,19:23:34.18:1035,34,0	1/1:3,16:18:45.15:816,45,0	1/1:2,9:8:18.06:296,18,0	1/1:5,18:23:11.62:1029,12,0	1/1:5,22:27:58.70:1196,59,0	0/1:3,13:16:24.52:641,0,25	1/1:2,29:31:93.30:1605,93,0	1/1:1,14:15:42.14:743,42,0	1/1:2,9:11:30.09:503,30,0	1/1:3,6:9:21.07:367,21,0	1/1:1,6:9:23.74:413,24,0	1/1:2,3:4:6.02:103,6,0	0/1:3,5:8:6.60:216,0,7	1/1:3,14:17:45.15:780,45,0	1/1:1,6:7:18.06:313,18,0	1/1:3,10:13:29.23:498,29,0	1/1:1,11:14:27.09:479,27,0	1/1:0,29:31:93.30:1641,93,0	1/1:5,23:28:66.23:1191,66,0	1/1:0,3:3:9.03:163,9,0
chr10	19279601	.	T	TTTAAAC	40418.54	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=7.586;DP=615;FS=0.000;HRun=0;HaplotypeScore=235.6690;InbreedingCoeff=0.9379;MQ=78.04;MQ0=0;MQRankSum=-11.648;QD=71.79;ReadPosRankSum=5.854;VQSLOD=5.1265;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:12,30:42:99:2632,102,0	1/1:4,5:8:24.04:633,24,0	0/0:28,0:28:73.13:0,73,1724	0/0:24,0:23:60.20:0,60,1393	1/1:13,19:29:72.25:2029,72,0	1/1:5,12:17:39.13:1160,39,0	1/1:6,14:20:54.19:1614,54,0	1/1:13,12:25:34.35:1687,34,0	1/1:11,19:30:84.76:2516,85,0	1/1:9,15:24:66.18:1765,66,0	1/1:4,8:10:27.09:641,27,0	1/1:5,18:25:75.26:2235,75,0	1/1:9,22:31:92.66:2610,93,0	1/1:10,13:23:66.23:1873,66,0	1/1:14,29:43:99:3507,120,0	1/1:12,14:26:78.27:2108,78,0	1/1:6,9:15:45.15:1346,45,0	1/1:6,6:12:23.97:757,24,0	1/1:9,6:15:28.35:959,28,0	1/1:8,3:7:9.03:251,9,0	1/1:9,5:14:33.11:861,33,0	1/1:5,14:18:30.41:1215,30,0	1/1:3,5:8:21.07:621,21,0	1/1:7,10:18:41.04:992,41,0	1/1:9,11:16:36.10:1019,36,0	1/1:7,29:36:86.25:2888,86,0	1/1:7,23:30:64.87:2216,65,0	1/1:0,3:3:9.03:283,9,0
chr10	19280393	.	G	GAC	2204.09	PASS	AB=0.982;AC=29;AF=0.518;AN=56;BaseQRankSum=12.971;DP=469;FS=0.852;HRun=0;HaplotypeScore=97.4289;InbreedingCoeff=0.7735;MQ=59.13;MQ0=3;MQRankSum=1.990;QD=8.41;ReadPosRankSum=4.636;VQSLOD=3.3856;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:28,1:29:58.34:307,58,0	0/0:7,0:7:21.07:0,21,289	0/0:8,0:7:17.49:0,17,178	0/0:3,0:3:9.03:0,9,115	0/0:29,0:29:72.23:0,72,1012	1/1:22,1:23:52.30:300,52,0	1/1:11,0:11:21.97:116,22,0	0/0:36,0:32:84.28:0,84,1224	1/1:7,0:7:13.72:64,14,0	1/1:29,1:31:44.63:302,45,0	1/1:13,0:13:22.61:105,23,0	1/1:13,0:13:23.53:121,24,0	0/0:11,0:11:30.10:0,30,437	0/0:15,0:15:6.72:0,7,31	0/0:14,0:14:39.13:0,39,588	1/1:11,0:11:26.78:138,27,0	0/1:20,0:20:24.92:100,0,25	0/1:17,0:17:21.68:109,0,22	1/1:11,0:10:18.56:133,19,0	1/1:14,1:15:9.93:83,10,0	1/1:19,0:19:22.83:189,23,0	1/1:12,0:12:29.87:151,30,0	0/1:17,0:18:2.23:93,0,2	1/1:11,0:12:18.03:111,18,0	0/0:38,0:38:90.28:0,90,1295	0/0:33,0:33:93.02:0,93,1407	0/0:6,0:5:15.05:0,15,219	0/0:7,0:6:18.06:0,18,257
chr10	19280394	.	A	AC	5223.24	PASS	AB=0.589;AC=30;AF=0.536;AN=56;BaseQRankSum=-4.456;DP=475;FS=0.406;HRun=0;HaplotypeScore=78.5560;InbreedingCoeff=0.8489;MQ=60.29;MQ0=3;MQRankSum=1.683;QD=19.64;ReadPosRankSum=4.540;VQSLOD=6.5819;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,25:29:62.65:625,63,0	0/0:7,0:7:21.05:0,21,253	0/0:9,0:8:14.99:0,15,186	0/0:3,0:3:9.03:0,9,122	0/0:29,0:29:72.22:0,72,920	1/1:5,17:23:55.47:555,55,0	1/1:2,10:12:24.05:247,24,0	0/0:36,0:32:84.28:0,84,1133	1/1:2,5:7:14.06:143,14,0	1/1:15,16:32:35.62:505,36,0	1/1:1,12:13:29.60:294,30,0	1/1:3,10:13:26.54:275,27,0	0/0:12,0:12:30.10:0,30,391	0/0:16,0:16:4.63:0,5,22	0/0:13,0:13:39.13:0,39,538	1/1:1,10:11:29.62:294,30,0	0/1:5,15:20:1.66:295,0,2	0/1:6,11:17:10.16:288,0,10	1/1:5,6:10:19.01:196,19,0	1/1:10,5:15:13.19:153,13,0	1/1:1,19:20:16.56:421,17,0	1/1:3,10:13:32.96:322,33,0	1/1:5,13:18:20.69:341,21,0	1/1:1,11:12:29.08:270,29,0	0/0:38,0:38:90.27:0,90,1172	0/0:33,0:33:80.45:0,80,1265	0/0:6,0:5:15.05:0,15,196	0/0:7,0:6:18.06:0,18,232
chr10	19280395	.	TA	T	2275.58	PASS	AB=0.800;AC=15;AF=0.268;AN=56;BaseQRankSum=-11.744;DP=476;FS=8.742;HRun=10;HaplotypeScore=92.3261;InbreedingCoeff=0.8655;MQ=61.44;MQ0=3;MQRankSum=2.009;QD=16.73;ReadPosRankSum=1.739;VQSLOD=3.7789;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:29:61.79:0,62,306	1/1:0,7:7:21:182,21,0	0/0:9,0:8:20.98:0,21,203	0/1:3,1:4:14.03:14,0,80	1/1:3,26:29:59.74:520,60,0	0/0:22,0:22:48.64:0,49,254	0/0:12,0:12:25.72:0,26,140	0/0:34,0:30:57.12:0,57,617	0/0:7,0:7:14.24:0,14,72	0/0:32,0:32:62.87:0,63,327	0/0:14,0:14:31.30:0,31,165	0/0:13,0:13:28.57:0,29,148	1/1:1,11:12:26.89:234,27,0	0/0:5,0:19:2.75:0,3,32	0/0:13,0:13:36.10:0,36,398	0/0:12,0:12:28.41:0,28,143	0/0:19,0:19:40.11:0,40,238	0/0:17,0:17:40.04:0,40,243	0/0:14,0:13:16.28:0,16,118	0/0:15,0:15:19.85:0,20,101	0/0:18,0:18:43.12:0,43,218	0/0:12,0:12:29.49:0,29,143	0/0:17,0:17:39.94:0,40,219	0/0:12,0:12:28.41:0,28,143	1/1:5,31:37:71.95:625,72,0	1/1:5,28:33:51.26:662,51,0	1/1:2,5:6:11.99:104,12,0	1/1:2,5:6:15:130,15,0
chr10	19280625	.	G	GC	1969.56	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-10.434;DP=639;FS=5.699;HRun=7;HaplotypeScore=94.0828;InbreedingCoeff=0.9671;MQ=81.06;MQ0=0;MQRankSum=-4.940;QD=27.74;ReadPosRankSum=-0.356;VQSLOD=3.6708;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,48:53:99:1548,129,0	0/0:8,0:8:12.01:0,12,116	0/0:21,0:21:41.93:0,42,391	0/0:13,0:13:33.01:0,33,310	0/0:21,0:21:57.08:0,57,545	0/0:27,0:27:69.09:0,69,666	0/0:35,0:35:99:0,99,942	0/0:16,0:16:39.06:0,39,376	1/1:3,15:18:45.14:544,45,0	0/0:31,0:31:74.99:0,75,722	0/0:12,0:12:24.03:0,24,232	0/0:41,0:41:99:0,108,1042	0/0:22,0:22:57.09:0,57,550	0/0:25,0:25:72.10:0,72,688	0/0:16,0:16:45.07:0,45,435	0/0:26,0:26:69.05:0,69,660	0/0:34,0:34:96.12:0,96,920	0/0:27,0:27:75.11:0,75,724	0/0:14,0:14:33.01:0,33,318	0/0:15,0:15:36.05:0,36,346	0/0:39,0:39:99:0,102,985	0/0:19,0:19:51.01:0,51,483	0/0:14,0:14:30.04:0,30,289	0/0:24,0:24:63.06:0,63,608	0/0:19,0:19:51.08:0,51,492	0/0:31,0:30:84.10:0,84,800	0/0:11,0:11:30.03:0,30,283	0/0:7,0:7:12.02:0,12,116
chr10	19280996	.	A	AAC	1892.68	PASS	AB=0.929;AC=22;AF=0.393;AN=56;BaseQRankSum=9.588;DP=605;FS=1.065;HRun=0;HaplotypeScore=134.0421;InbreedingCoeff=0.2904;MQ=84.47;MQ0=1;MQRankSum=-9.082;QD=5.70;ReadPosRankSum=1.854;VQSLOD=2.9417;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:26:35.22:35,0,49	0/0:8,0:8:24.08:0,24,353	0/0:24,0:24:66.21:0,66,950	0/0:24,0:24:59.80:0,60,876	0/0:19,0:19:51.17:0,51,745	0/1:22,5:27:99:240,0,481	0/1:22,8:29:99:305,0,277	0/0:31,0:31:81.22:0,81,1133	1/1:20,0:20:18:194,18,0	1/1:12,0:12:24.26:277,24,0	0/1:27,0:28:99:112,0,231	1/1:22,0:22:6.28:64,6,0	0/0:21,0:21:63.19:0,63,889	1/1:25,0:25:5.91:38,6,0	0/0:20,0:20:60.19:0,60,864	1/1:15,0:15:5.66:47,6,0	0/1:14,0:14:26.42:26,0,38	1/1:10,0:10:6.02:65,6,0	0/1:28,0:28:99:489,0,391	0/0:12,0:12:3.01:0,3,44	0/1:23,8:31:74.86:75,0,82	0/0:25,0:25:47.61:0,48,395	0/1:24,0:24:55.76:56,0,234	1/1:19,0:19:6:57,6,0	0/0:24,0:24:69.23:0,69,1014	0/0:32,0:32:87.24:0,87,1230	0/0:25,0:25:72.24:0,72,1054	0/0:8,0:8:24.08:0,24,353
chr10	19280997	.	ACGG	A	1543.42	PASS	AB=0.744;AC=7;AF=0.125;AN=56;BaseQRankSum=5.231;DP=604;FS=6.001;HRun=0;HaplotypeScore=125.7915;InbreedingCoeff=-0.1887;MQ=84.54;MQ0=1;MQRankSum=-6.654;QD=8.72;ReadPosRankSum=0.481;VQSLOD=2.2752;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:25:6.02:0,6,92	0/0:8,0:8:24.08:0,24,567	0/0:24,0:24:69.24:0,69,1587	0/0:24,0:24:64.04:0,64,1435	0/0:19,0:19:51.18:0,51,1204	0/1:19,8:27:99:222,0,703	0/1:19,11:29:99:259,0,501	0/0:35,0:35:93.27:0,93,1970	0/0:20,0:20:15.04:0,15,172	0/1:12,0:12:29.74:333,0,30	0/1:16,12:28:82.65:83,0,485	0/0:22,0:22:12.04:0,12,174	0/0:21,0:21:63.19:0,63,1394	0/0:25,0:25:5.88:0,6,88	0/0:20,0:20:60.19:0,60,1372	0/0:14,0:14:6.02:0,6,81	0/0:14,0:14:3.01:0,3,53	0/0:10,0:10:5.91:0,6,38	0/1:12,15:27:99:658,0,505	0/0:12,0:12:3.01:0,3,54	0/1:15,14:29:61.37:61,0,358	0/0:18,8:26:51.17:0,51,917	0/1:13,11:24:55.16:55,0,593	0/0:18,0:18:3.01:0,3,30	0/0:23,0:23:69.24:0,69,1601	0/0:32,0:32:96.29:0,96,2207	0/0:26,0:26:78.27:0,78,1760	0/0:8,0:8:24.08:0,24,566
chr10	19280998	.	C	CACGGCATCTCAGATGAGCAGGCAGGAAAT	44698.90	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=8.648;DP=733;FS=0.000;HRun=0;HaplotypeScore=337.5569;InbreedingCoeff=0.8731;MQ=78.97;MQ0=1;MQRankSum=-16.196;QD=90.67;ReadPosRankSum=-0.009;VQSLOD=3.1199;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,2:38:6.02:788,6,0	0/0:8,0:8:24.08:0,24,1595	0/0:25,0:25:69.10:0,69,3105	0/0:23,0:23:62.41:0,62,2461	0/0:19,0:19:51.65:0,52,3291	1/1:28,0:28:69.21:5760,69,0	1/1:29,0:28:66.15:5094,66,0	0/0:34,0:34:87.12:0,87,2980	1/1:0,5:35:15.05:2049,15,0	1/1:0,2:26:69.64:5150,70,0	1/1:26,0:26:52.99:2849,53,0	1/1:0,4:36:12.04:1639,12,0	0/0:21,0:21:63.19:0,63,3847	1/1:3,2:40:6.49:819,6,0	0/0:20,0:20:60.19:0,60,4102	1/1:0,2:27:6.42:821,6,0	1/1:0,1:25:3.01:389,3,0	1/1:0,2:26:6.02:821,6,0	1/1:27,0:27:75.25:6147,75,0	1/1:0,1:22:5.95:312,6,0	1/1:29,0:29:41.66:3385,42,0	1/1:26,0:26:59.60:4653,60,0	1/1:24,0:24:56.70:3615,57,0	1/1:0,1:28:3.01:409,3,0	0/0:23,0:23:69.24:0,69,4745	0/0:32,0:32:96.10:0,96,5103	0/0:27,0:27:78.24:0,78,4171	0/0:8,0:8:24.08:0,24,1637
chr10	19281006	.	C	CA	481.55	PASS	AB=0.686;AC=2;AF=0.036;AN=56;BaseQRankSum=5.970;DP=620;FS=0.853;HRun=0;HaplotypeScore=121.8483;InbreedingCoeff=-0.0554;MQ=87.80;MQ0=0;MQRankSum=-5.682;QD=8.16;ReadPosRankSum=1.227;VQSLOD=3.8127;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:12.03:0,12,170	0/0:8,0:8:24.08:0,24,336	0/0:29,0:29:84.19:0,84,1134	0/0:25,0:25:69.65:0,70,900	0/0:21,0:21:63.19:0,63,861	0/0:19,8:27:54.16:0,54,685	0/0:15,11:26:45.06:0,45,542	0/0:29,0:29:81.27:0,81,1133	0/0:24,0:24:24.04:0,24,291	0/0:18,0:18:6.72:0,7,301	0/0:12,11:23:29.30:0,29,385	0/0:22,0:22:12.04:0,12,156	0/0:22,0:22:63.21:0,63,880	0/0:22,0:22:27.09:0,27,349	0/0:20,0:20:60.20:0,60,839	0/0:17,0:17:12.04:0,12,156	0/0:18,0:18:9.03:0,9,113	0/0:21,0:21:8.99:0,9,87	0/1:15,13:28:99:539,0,416	0/0:15,0:15:16.60:0,17,198	0/1:17,14:31:31.31:31,0,454	0/0:21,8:29:57.18:0,57,736	0/0:16,8:24:42.14:0,42,541	0/0:12,0:12:3.01:0,3,38	0/0:23,0:23:66.22:0,66,923	0/0:30,0:30:87.29:0,87,1217	0/0:26,0:26:75.25:0,75,1048	0/0:9,0:9:27.09:0,27,378
chr10	19281982	.	C	CCCAAACAACAG	47173.47	PASS	AB=0.958;AC=35;AF=0.625;AN=56;BaseQRankSum=-2.720;DP=661;FS=11.762;HRun=0;HaplotypeScore=195.0315;InbreedingCoeff=0.9196;MQ=85.83;MQ0=0;MQRankSum=-18.833;QD=110.48;ReadPosRankSum=1.299;VQSLOD=3.9347;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,7:23:39.13:1908,39,0	0/0:8,0:8:21.07:0,21,672	0/0:30,0:30:81.11:0,81,2594	0/0:26,0:26:58.04:0,58,1830	0/0:17,0:17:48.15:0,48,1438	1/1:15,12:34:69.24:3432,69,0	1/1:12,12:24:66.23:3439,66,0	0/0:39,0:39:99:0,99,3222	1/1:10,16:30:78.22:4115,78,0	1/1:11,11:28:78.25:3262,78,0	1/1:3,3:8:18.06:823,18,0	1/1:9,12:24:60.21:3154,60,0	0/0:26,0:26:78.25:0,78,2620	1/1:20,12:33:93.32:4804,93,0	0/0:33,0:33:96.22:0,96,3272	1/1:13,21:35:90.31:4949,90,0	1/1:13,10:25:48.16:2718,48,0	1/1:5,7:14:30.10:1715,30,0	1/1:17,1:21:57.16:1955,57,0	1/1:9,11:24:60.16:2754,60,0	1/1:21,1:30:41.53:1709,42,0	1/1:7,9:17:45.15:2255,45,0	1/1:4,11:18:45.15:2291,45,0	1/1:6,8:15:33.11:1655,33,0	0/0:20,0:20:51.17:0,51,1765	0/1:22,1:23:99:235,0,1795	0/0:30,0:30:90.25:0,90,2815	0/0:5,0:5:15.05:0,15,529
chr10	19282446	.	A	AC	13848.77	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-17.491;DP=753;FS=6.702;HRun=5;HaplotypeScore=81.7811;InbreedingCoeff=0.9952;MQ=84.78;MQ0=1;MQRankSum=-5.840;QD=30.37;ReadPosRankSum=3.406;VQSLOD=5.4779;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:11,45:56:99:1460,111,0	0/0:10,0:10:24.04:0,24,250	0/0:25,0:23:56.14:0,56,571	0/0:28,0:28:66.15:0,66,700	0/0:25,0:25:63.14:0,63,668	1/1:1,20:21:57.19:750,57,0	1/1:3,28:31:81.26:1066,81,0	0/0:41,0:41:96.18:0,96,1003	1/1:3,28:31:75.24:986,75,0	1/1:3,26:29:78.25:1021,78,0	1/1:4,18:22:51.17:671,51,0	1/1:1,22:23:57.18:750,57,0	0/0:29,0:29:78.18:0,78,829	1/1:3,18:21:41.92:552,42,0	0/0:44,0:44:99:0,123,1302	1/1:2,24:26:54.18:710,54,0	1/1:6,34:40:84.27:1105,84,0	1/1:1,20:21:57.19:750,57,0	1/1:3,14:17:42.13:529,42,0	1/1:3,15:18:36.12:472,36,0	1/1:1,26:27:63.20:829,63,0	1/1:1,20:21:51.16:664,51,0	1/1:3,14:17:36.12:469,36,0	1/1:5,30:35:81.26:1066,81,0	0/0:25,0:25:66.15:0,66,702	0/0:31,0:31:78.18:0,78,826	0/0:34,0:34:96.21:0,96,1014	0/0:5,0:5:12.03:0,12,129
chr10	19282989	.	T	TAGCA	27316.22	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-14.630;DP=688;FS=9.922;HRun=0;HaplotypeScore=98.8234;InbreedingCoeff=0.9949;MQ=84.01;MQ0=0;MQRankSum=-4.304;QD=60.97;ReadPosRankSum=3.797;VQSLOD=6.6162;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,45:57:99:3025,114,0	0/0:8,0:8:24.08:0,24,446	0/0:29,0:29:77.05:0,77,1243	0/0:20,0:20:45.14:0,45,825	0/0:19,0:18:57.20:0,57,1063	1/1:5,24:30:66.23:1759,66,0	1/1:2,24:27:66.18:1697,66,0	0/0:37,0:37:96.32:0,96,1753	1/1:1,27:28:66.23:1760,66,0	1/1:6,26:36:99:2470,102,0	1/1:0,9:9:24.04:578,24,0	1/1:3,33:38:87.30:2318,87,0	0/0:34,0:34:96.33:0,96,1760	1/1:0,22:22:57.20:1514,57,0	0/0:29,0:29:87.30:0,87,1621	1/1:1,13:14:39.13:1040,39,0	1/1:1,26:27:72.25:1916,72,0	1/1:2,9:11:30.10:800,30,0	1/1:8,14:25:69.21:1644,69,0	1/1:1,17:18:45.11:1138,45,0	1/1:3,29:33:66.23:1758,66,0	1/1:3,17:22:42.06:1000,42,0	1/1:5,18:23:54.14:1379,54,0	1/1:5,21:28:56.55:1518,57,0	0/0:18,0:18:48.16:0,48,894	0/0:24,0:24:72.24:0,72,1296	0/0:18,0:18:51.17:0,51,949	0/0:4,0:4:11.99:0,12,128
chr10	19283177	.	T	TC	2819.69	PASS	AB=0.885;AC=47;AF=0.870;AN=54;BaseQRankSum=-0.064;DP=475;FS=3.993;HRun=11;HaplotypeScore=107.6978;InbreedingCoeff=-0.0335;MQ=82.67;MQ0=1;MQRankSum=-3.604;QD=5.96;ReadPosRankSum=1.847;VQSLOD=2.2026;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:22:38.25:169,38,0	./.	0/1:17,0:16:8.55:49,0,9	0/1:24,0:25:20.65:21,0,97	0/1:5,4:9:14.18:52,0,14	1/1:23,0:23:40.60:172,41,0	1/1:21,0:21:40.57:169,41,0	1/1:17,0:17:16.95:65,17,0	1/1:15,0:15:19.01:80,19,0	1/1:13,0:13:27.20:120,27,0	1/1:14,0:14:14.74:69,15,0	1/1:13,0:14:24.40:103,24,0	0/1:14,1:15:11.48:60,0,11	1/1:19,0:19:40.85:174,41,0	1/1:6,2:8:6.48:62,6,0	1/1:12,0:12:19.58:83,20,0	1/1:34,0:34:36.49:216,36,0	1/1:31,0:30:56.38:232,56,0	1/1:25,0:25:36.50:163,36,0	1/1:13,0:13:24.53:117,25,0	1/1:19,0:19:30.21:137,30,0	1/1:20,0:22:49.14:224,49,0	1/1:13,0:13:24.49:105,24,0	1/1:25,0:25:48.57:204,49,0	0/1:10,2:12:10.65:52,0,11	1/1:15,0:16:2.60:10,3,0	0/1:8,4:12:0.01:0,0,0	0/1:6,0:6:11.92:37,0,12
chr10	19283183	.	C	CCA	972.02	PASS	AB=1.000;AC=20;AF=0.357;AN=56;BaseQRankSum=2.070;DP=471;FS=3.597;HRun=0;HaplotypeScore=123.8451;InbreedingCoeff=-0.1645;MQ=81.74;MQ0=1;MQRankSum=-6.343;QD=2.99;ReadPosRankSum=6.696;VQSLOD=1.9940;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:25:28.16:28,0,96	0/0:2,0:2:3:0,3,26	0/0:17,0:16:34.79:0,35,268	0/0:23,0:23:45.33:0,45,490	0/0:12,0:12:25.21:0,25,186	0/1:23,0:23:21.42:21,0,49	1/1:19,0:19:1.48:83,1,0	1/1:3,12:16:29.99:412,30,0	0/1:11,0:11:9.74:37,0,10	0/1:18,0:18:19.24:19,0,118	0/1:13,0:13:27.80:28,0,28	0/1:17,0:17:8.92:48,0,9	0/0:16,0:16:17.92:0,18,141	1/1:18,0:18:4.29:95,4,0	0/0:8,0:8:17.28:0,17,118	0/1:10,0:10:17.42:25,0,17	0/1:32,0:32:47.13:47,0,105	0/1:28,0:28:18.63:19,0,71	0/0:26,0:26:4.38:0,4,284	0/1:13,0:13:57.96:58,0,64	0/1:20,0:20:27.97:28,0,84	0/1:22,0:22:51.52:79,0,52	0/1:13,0:13:9.09:55,0,9	0/1:27,0:26:27.04:55,0,27	0/0:11,0:11:17.34:0,17,144	0/0:13,0:13:12.48:0,12,108	0/0:13,0:13:16.24:0,16,106	0/0:5,0:5:11.44:0,11,82
chr10	19283186	.	C	CAT	5373.25	PASS	AB=0.545;AC=33;AF=0.589;AN=56;BaseQRankSum=1.205;DP=470;FS=12.720;HRun=0;HaplotypeScore=127.3130;InbreedingCoeff=0.7674;MQ=78.78;MQ0=1;MQRankSum=-5.582;QD=15.85;ReadPosRankSum=10.985;VQSLOD=2.8004;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:1,0:23:20.43:306,20,0	0/0:3,0:3:8.99:0,9,91	0/0:14,0:14:4.68:0,5,336	0/0:20,0:20:36.04:0,36,505	0/0:12,0:12:33.09:0,33,448	1/1:2,0:21:44.65:381,45,0	1/1:4,0:21:45.01:429,45,0	0/0:14,0:14:36.03:0,36,388	1/1:0,0:10:20.98:186,21,0	1/1:3,0:22:1.45:258,1,0	1/1:1,1:13:16.64:175,17,0	1/1:2,0:17:4.81:224,5,0	0/0:16,0:16:23.99:0,24,259	1/1:2,0:20:45.01:427,45,0	0/0:7,0:7:13.26:0,13,124	1/1:2,0:9:15.79:167,16,0	1/1:3,0:30:43.95:521,44,0	1/1:3,0:31:66.81:569,67,0	0/1:4,0:24:41.50:255,0,42	1/1:2,0:12:6.01:204,6,0	1/1:2,0:20:4.51:213,5,0	1/1:4,0:24:43.85:392,44,0	1/1:2,0:14:26.99:240,27,0	1/1:4,0:27:14.14:428,14,0	0/0:14,0:14:27:0,27,305	0/0:12,0:12:1.02:0,1,196	0/0:13,0:13:18.04:0,18,189	0/0:5,0:5:12.02:0,12,142
chr10	19283265	.	GC	G	4963.45	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=8.751;DP=640;FS=3.342;HRun=1;HaplotypeScore=99.9190;InbreedingCoeff=0.9920;MQ=82.93;MQ0=0;MQRankSum=-1.852;QD=39.08;ReadPosRankSum=3.692;VQSLOD=5.1738;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:84.26:0,84,1295	1/1:0,7:7:21.07:293,21,0	0/0:20,0:20:59.91:0,60,878	0/0:25,0:25:69.13:0,69,997	1/1:0,22:22:63.17:859,63,0	0/0:23,0:23:60.19:0,60,933	0/0:32,0:32:96.26:0,96,1437	0/0:30,0:30:90.27:0,90,1354	0/0:33,0:33:90.31:0,90,1436	0/0:28,0:28:81.11:0,81,1173	0/0:14,0:14:36.12:0,36,575	0/0:30,0:30:78.27:0,78,1233	1/1:0,29:29:87.29:1215,87,0	0/0:27,0:27:75.26:0,75,1188	0/0:20,0:20:60.20:0,60,954	0/0:21,0:21:63.20:0,63,983	0/0:21,0:21:54.18:0,54,861	0/0:24,0:24:57.18:0,57,886	0/0:29,0:29:87.29:0,87,1361	0/0:9,0:9:27.09:0,27,431	0/0:24,0:24:66.21:0,66,1027	0/0:20,0:20:60.12:0,60,927	0/0:20,0:20:54.17:0,54,825	0/0:30,0:30:72.15:0,72,1050	1/1:2,20:22:63.20:865,63,0	1/1:1,21:22:18.25:832,18,0	1/1:0,21:21:54.14:732,54,0	1/1:0,4:4:12.04:168,12,0
chr10	19285468	.	ATAT	A	271.51	PASS	AB=0.970;AC=14;AF=0.259;AN=54;BaseQRankSum=4.719;DP=437;FS=0.000;HRun=0;HaplotypeScore=143.1168;InbreedingCoeff=0.0918;MQ=35.51;MQ0=13;MQRankSum=-3.605;QD=1.44;ReadPosRankSum=-1.652;VQSLOD=2.2955;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:45:25.38:0,25,664	0/0:6,0:6:5.98:0,6,118	0/0:17,0:3:9.03:0,9,183	0/0:23,0:5:14.79:0,15,281	0/1:13,0:13:0:0,0,0	0/1:11,0:11:0.29:0,0,0	0/0:32,0:31:4.44:0,4,175	0/0:20,0:20:0.34:0,0,881	0/0:6,0:6:3.01:0,3,61	0/0:20,1:20:12.91:0,13,1044	0/1:6,0:6:0.06:0,0,0	1/1:14,1:15:5.88:90,6,0	0/0:17,0:17:1.42:0,1,16	0/1:13,1:14:43.15:43,0,68	0/1:24,0:21:44.78:94,0,45	0/1:19,3:22:86.54:111,0,87	0/1:19,1:18:28.94:29,0,103	0/1:6,0:5:16.71:17,0,138	0/0:11,0:8:24.08:0,24,586	0/1:19,0:18:0.26:1,0,0	0/1:6,1:6:0:0,0,0	0/1:15,0:14:0.46:1,0,0	0/0:9,0:8:2.59:0,3,13	0/1:16,0:16:0:0,0,0	./.	0/0:18,0:18:51.17:0,51,1009	0/0:12,0:12:0.23:0,0,74	0/0:4,0:4:5.69:0,6,51
chr10	19285509	.	ACT	A	2463.24	PASS	AB=1.000;AC=32;AF=0.571;AN=56;BaseQRankSum=-4.255;DP=508;FS=0.000;HRun=0;HaplotypeScore=133.9681;InbreedingCoeff=0.7293;MQ=61.76;MQ0=6;MQRankSum=1.178;QD=8.00;ReadPosRankSum=-0.240;VQSLOD=3.2907;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:31,6:37:39.63:295,40,0	0/0:4,0:4:8.60:0,9,52	0/0:36,0:15:13.62:0,14,285	0/0:46,0:26:64.37:0,64,617	0/0:8,0:8:11.62:0,12,75	1/1:13,0:13:17.98:151,18,0	1/1:35,0:34:43.94:341,44,0	0/0:19,0:19:39.23:0,39,457	1/1:11,2:13:20.94:184,21,0	0/1:25,0:23:99:108,0,120	1/1:7,0:7:5.99:50,6,0	1/1:22,0:22:31.71:231,32,0	0/0:17,0:17:41.74:0,42,320	1/1:17,0:17:14.78:113,15,0	0/0:27,0:24:25.59:0,26,237	1/1:21,0:21:22.05:180,22,0	1/1:25,0:23:29.39:217,29,0	1/1:12,0:11:8.27:164,8,0	0/1:12,0:10:49.13:53,0,49	1/1:15,0:14:5.99:51,6,0	1/1:21,0:20:42.36:337,42,0	1/1:12,0:11:8.99:76,9,0	1/1:7,0:6:3:25,3,0	1/1:14,0:14:11.98:99,12,0	0/0:6,0:6:2.90:0,3,16	0/0:14,0:14:36:0,36,287	0/0:17,0:17:40.57:0,41,310	0/0:6,0:6:11.64:0,12,81
chr10	19285809	.	A	AAC	2155.59	PASS	AB=0.651;AC=13;AF=0.232;AN=56;BaseQRankSum=14.224;DP=691;FS=26.349;HRun=0;HaplotypeScore=141.1637;InbreedingCoeff=0.8082;MQ=84.78;MQ0=0;MQRankSum=-13.232;QD=22.22;ReadPosRankSum=0.732;VQSLOD=2.2652;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,132,2148	1/1:3,6:9:21.05:232,21,0	0/0:31,0:31:90.26:0,90,1402	0/0:20,0:20:53:0,53,760	1/1:4,7:11:16.83:167,17,0	0/0:18,0:18:54.18:0,54,877	0/0:27,0:27:81.26:0,81,1290	0/0:35,0:35:99:0,105,1709	0/0:28,0:28:81.26:0,81,1298	0/0:29,0:29:87.26:0,87,1391	0/0:8,0:8:24.08:0,24,391	0/0:28,0:28:84.25:0,84,1318	1/1:4,11:15:24.10:402,24,0	0/0:31,0:31:93.32:0,93,1514	0/0:37,0:37:99:0,111,1810	0/0:42,0:42:99:0,126,2032	0/0:22,0:22:66.23:0,66,1063	0/0:31,0:31:93.30:0,93,1491	0/0:22,0:22:66.23:0,66,1074	0/0:26,0:26:60.20:0,60,971	0/0:30,0:30:90.27:0,90,1413	0/0:26,0:26:72.25:0,72,1158	0/0:21,0:21:63.22:0,63,1024	0/0:37,0:37:99:0,105,1684	1/1:6,13:19:47.14:489,47,0	0/1:13,15:28:42.45:704,0,42	1/1:3,11:14:1.22:327,1,0	1/1:1,0:1:1.82:5,2,0
chr10	19285810	.	G	GAGTCATAC	8511.33	PASS	AB=0.643;AC=13;AF=0.232;AN=56;BaseQRankSum=14.249;DP=701;FS=31.249;HRun=0;HaplotypeScore=205.8794;InbreedingCoeff=0.8624;MQ=83.94;MQ0=0;MQRankSum=-13.996;QD=87.75;ReadPosRankSum=1.848;VQSLOD=3.3528;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,135,3886	1/1:3,6:9:21.07:776,21,0	0/0:30,0:30:90.24:0,90,2264	0/0:20,0:20:60.01:0,60,1462	1/1:5,7:12:24.08:851,24,0	0/0:18,0:18:54.16:0,54,1448	0/0:27,0:27:78.25:0,78,2253	0/0:37,0:37:99:0,105,2882	0/0:28,0:28:81.26:0,81,2385	0/0:29,0:29:87.26:0,87,2499	0/0:8,0:8:24.08:0,24,726	0/0:28,0:28:81.25:0,81,2252	1/1:6,11:17:42.14:1500,42,0	0/0:31,0:31:93.32:0,93,2709	0/0:37,0:37:99:0,111,3292	0/0:42,0:42:99:0,126,3711	0/0:25,0:25:66.17:0,66,1746	0/0:31,0:31:90.31:0,90,2608	0/0:22,0:22:66.23:0,66,1907	0/0:26,0:26:63.20:0,63,1738	0/0:30,0:30:87.25:0,87,2353	0/0:26,0:26:75.19:0,75,2063	0/0:21,0:21:63.20:0,63,1798	0/0:40,0:40:99:0,108,3060	1/1:5,13:18:48.16:1769,48,0	0/1:12,15:27:27.63:2384,0,28	1/1:2,10:13:33.11:1141,33,0	1/1:1,0:1:3.01:90,3,0
chr10	19285912	.	CT	C	4763.87	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=15.368;DP=729;FS=6.970;HRun=2;HaplotypeScore=121.5332;InbreedingCoeff=0.9992;MQ=86.19;MQ0=0;MQRankSum=-4.990;QD=34.77;ReadPosRankSum=1.911;VQSLOD=4.0943;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:57:99:0,166,2427	1/1:0,10:10:30.10:389,30,0	0/0:30,0:30:87.18:0,87,1221	0/0:20,0:20:50.70:0,51,732	1/1:0,19:19:54.09:658,54,0	0/0:20,0:20:57.17:0,57,814	0/0:30,0:30:90.29:0,90,1324	0/0:28,0:28:81.27:0,81,1196	0/0:24,0:24:69.23:0,69,1023	0/0:25,0:25:72.24:0,72,1079	0/0:19,0:19:54.17:0,54,788	0/0:33,0:33:96.31:0,96,1400	1/1:0,32:32:81.26:1043,81,0	0/0:29,0:29:87.26:0,87,1246	0/0:36,0:36:99:0,108,1615	0/0:35,0:35:99:0,105,1572	0/0:29,0:29:87.28:0,87,1279	0/0:25,0:25:72.23:0,72,1059	0/0:25,0:25:72.22:0,72,1019	0/0:14,0:14:39.13:0,39,584	0/0:39,0:39:99:0,114,1706	0/0:22,0:22:63.20:0,63,919	0/0:14,0:13:39.13:0,39,583	0/0:38,0:38:99:0,114,1689	1/1:0,22:22:63.20:817,63,0	1/1:1,22:23:21.24:773,21,0	1/1:0,16:16:45.15:578,45,0	1/1:0,15:15:39.13:506,39,0
chr10	19287190	.	CAGAA	C	1577.73	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-7.177;DP=700;FS=7.148;HRun=0;HaplotypeScore=189.0472;InbreedingCoeff=0.9996;MQ=78.02;MQ0=0;MQRankSum=-5.622;QD=45.08;ReadPosRankSum=-4.466;VQSLOD=2.5246;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:93.32:0,93,2480	0/0:11,0:11:33.11:0,33,868	0/0:19,0:18:51.17:0,51,1299	0/0:16,0:16:45.02:0,45,1016	0/0:29,0:29:87.30:0,87,2338	0/0:26,0:26:78.25:0,78,2050	0/0:20,0:20:60.21:0,60,1618	1/1:4,31:35:93.29:1673,93,0	0/0:17,0:17:48.16:0,48,1293	0/0:34,0:34:96.33:0,96,2593	0/0:20,0:20:57.18:0,57,1437	0/0:21,0:21:54.16:0,54,1347	0/0:28,0:28:81.28:0,81,2158	0/0:25,0:25:75.26:0,75,1964	0/0:33,0:33:99:0,99,2604	0/0:22,0:21:66.21:0,66,1725	0/0:21,0:21:60.21:0,60,1574	0/0:23,0:23:66.23:0,66,1745	0/0:21,0:21:51.17:0,51,1295	0/0:19,0:19:54.19:0,54,1428	0/0:13,0:13:39.13:0,39,999	0/0:27,0:27:75.22:0,75,1857	0/0:27,0:27:78.27:0,78,2020	0/0:19,0:19:57.20:0,57,1539	0/0:42,0:42:99:0,123,3105	0/0:37,0:37:99:0,102,2721	0/0:36,0:36:99:0,105,2615	0/0:28,0:28:84.29:0,84,2202
chr10	19287392	.	G	GAGATAA	14019.03	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=8.532;DP=756;FS=5.039;HRun=0;HaplotypeScore=183.2168;InbreedingCoeff=0.9998;MQ=80.18;MQ0=2;MQRankSum=-17.084;QD=69.75;ReadPosRankSum=-0.610;VQSLOD=4.8875;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:72.20:0,72,1514	1/1:3,10:12:33.10:1023,33,0	0/0:22,0:22:44.26:0,44,924	0/0:30,0:28:50.11:0,50,876	1/1:13,19:32:66.04:1643,66,0	0/0:27,0:27:78.23:0,78,1599	0/0:25,0:25:63.20:0,63,1337	0/0:39,0:39:99:0,102,2127	0/0:29,0:29:81.26:0,81,1729	0/0:26,0:26:63.22:0,63,1398	0/0:22,0:22:63.22:0,63,1345	0/0:29,0:29:78.27:0,78,1729	1/1:18,18:35:84.17:2313,84,0	0/0:31,0:31:72.23:0,72,1533	0/0:38,0:38:96.32:0,96,2065	0/0:28,0:28:78.25:0,78,1659	0/0:22,0:22:57.20:0,57,1238	0/0:31,0:31:84.23:0,84,1779	0/0:17,0:17:39.11:0,39,783	0/0:27,0:27:69.24:0,69,1489	0/0:13,0:13:33.11:0,33,692	0/0:24,0:24:63.22:0,63,1398	0/0:25,0:25:66.21:0,66,1402	0/0:21,0:21:47.37:0,47,996	1/1:12,26:38:93.25:2945,93,0	1/1:7,17:24:66.16:1916,66,0	1/1:17,28:45:99:3312,108,0	1/1:4,8:12:30.07:866,30,0
chr10	19287434	.	GA	G	4603.20	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=17.852;DP=720;FS=0.334;HRun=7;HaplotypeScore=130.0085;InbreedingCoeff=0.9996;MQ=83.71;MQ0=0;MQRankSum=-10.500;QD=27.08;ReadPosRankSum=3.108;VQSLOD=3.3283;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:64.39:0,64,387	1/1:2,8:10:24.05:245,24,0	0/0:25,1:26:32.38:0,32,646	0/0:31,0:30:43.24:0,43,681	1/1:1,25:26:66.14:672,66,0	0/0:28,0:28:69.22:0,69,868	0/0:23,0:23:57.15:0,57,690	0/0:40,0:40:99:0,108,1297	0/0:24,0:24:61.21:0,61,353	0/0:31,0:31:81.26:0,81,1017	0/0:21,0:21:57.17:0,57,706	0/0:31,0:31:87.22:0,87,1053	1/1:1,21:22:63.14:641,63,0	0/0:27,0:27:78.25:0,78,980	0/0:31,0:31:90.29:0,90,1131	0/0:24,0:24:57.18:0,57,717	0/0:22,0:22:60.16:0,60,724	0/0:41,0:41:99:0,102,1283	0/0:17,0:17:45.14:0,45,566	0/0:19,0:19:54.15:0,54,655	0/0:20,0:20:60.16:0,60,728	0/0:21,0:21:57.18:0,57,712	0/0:27,0:27:78.24:0,78,970	0/0:20,0:20:51.15:0,51,627	1/1:7,30:37:87.18:886,87,0	1/1:1,20:21:60.11:603,60,0	1/1:2,30:32:90.20:914,90,0	1/1:1,21:22:63.14:642,63,0
chr10	19287894	.	CTATGAAATAACGCACAGATTG	C	10141.96	PASS	AB=0.577;AC=13;AF=0.232;AN=56;BaseQRankSum=12.588;DP=762;FS=3.044;HRun=0;HaplotypeScore=484.8067;InbreedingCoeff=0.8716;MQ=76.11;MQ0=0;MQRankSum=-11.086;QD=101.42;ReadPosRankSum=4.471;VQSLOD=4.1971;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,135,10657	1/1:2,3:6:12.04:707,12,0	0/0:20,0:20:57.20:0,57,3825	0/0:18,0:18:54.19:0,54,3687	1/1:6,13:18:27.09:1434,27,0	0/0:22,0:22:63.22:0,63,4927	0/0:33,0:33:93.32:0,93,7361	0/0:25,0:25:72.25:0,72,5593	0/0:35,0:35:99:0,102,8533	0/0:37,0:37:99:0,108,8744	0/0:22,0:22:66.23:0,66,5806	0/0:37,0:37:99:0,105,8964	1/1:5,10:15:24.08:1415,24,0	0/0:34,0:34:99:0,99,8802	0/0:40,0:40:99:0,117,10556	0/0:42,0:42:99:0,120,10251	0/0:30,0:30:90.31:0,90,7408	0/0:28,0:28:81.28:0,81,6628	0/0:29,0:29:75.24:0,75,4898	0/0:19,0:19:57.20:0,57,4576	0/0:71,0:71:99:0,202,15891	0/0:19,0:19:57.20:0,57,4423	0/0:22,0:22:57.67:0,58,4621	0/0:34,0:34:96.33:0,96,7937	1/1:3,14:17:39.13:2278,39,0	0/1:4,11:15:29.27:1562,0,29	1/1:6,16:22:41.93:2391,42,0	1/1:4,2:6:6.02:354,6,0
chr10	19288031	.	A	ACC	25178.53	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=15.157;DP=645;FS=1.674;HRun=2;HaplotypeScore=219.7328;InbreedingCoeff=0.9780;MQ=80.00;MQ0=0;MQRankSum=-15.934;QD=48.33;ReadPosRankSum=3.685;VQSLOD=4.6060;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,15:17:42.14:844,42,0	1/1:1,9:12:23.92:484,24,0	0/0:29,0:29:87.30:0,87,1399	0/0:23,0:23:66.23:0,66,1073	1/1:6,19:25:39.13:785,39,0	1/1:7,23:31:72.20:1378,72,0	1/1:3,28:31:81.28:1634,81,0	0/0:31,0:31:87.28:0,87,1372	1/1:1,34:36:99:2010,102,0	1/1:4,23:28:81.28:1598,81,0	1/1:4,8:13:15.05:303,15,0	1/1:1,30:31:81.28:1628,81,0	1/1:2,17:19:51.18:1024,51,0	1/1:1,27:28:72.20:1412,72,0	0/0:41,0:41:99:0,120,1957	1/1:3,35:38:99:2060,105,0	1/1:1,21:23:54.19:1090,54,0	1/1:0,14:15:36.12:729,36,0	1/1:3,10:15:42.02:758,42,0	1/1:3,12:15:30.10:606,30,0	1/1:3,20:24:39.03:784,39,0	1/1:2,20:23:53.97:1039,54,0	1/1:2,10:12:27.09:544,27,0	1/1:1,9:11:24.08:482,24,0	1/1:2,13:15:45.15:905,45,0	1/1:4,28:35:90.31:1808,90,0	1/1:3,18:21:57.15:1093,57,0	1/1:0,3:3:9.03:182,9,0
chr10	19288476	.	ACT	A	6399.34	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=19.515;DP=584;FS=2.706;HRun=0;HaplotypeScore=174.5966;InbreedingCoeff=0.9916;MQ=79.65;MQ0=0;MQRankSum=-18.606;QD=23.10;ReadPosRankSum=1.678;VQSLOD=5.0109;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,12:13:22.44:211,22,0	0/0:10,0:10:30.10:0,30,609	0/0:25,0:25:70.47:0,70,1264	0/0:17,0:17:40.43:0,40,869	0/0:31,0:31:87.30:0,87,1768	1/1:3,12:15:42.05:409,42,0	1/1:1,15:16:43.95:405,44,0	0/0:41,0:41:99:0,123,2385	1/1:1,19:20:48.09:485,48,0	1/1:1,18:19:57:587,57,0	1/1:0,16:16:46.23:432,46,0	1/1:0,22:22:59.89:579,60,0	0/0:38,0:38:99:0,114,2279	1/1:0,20:20:39.56:397,40,0	0/0:39,0:39:99:0,117,2365	1/1:0,24:24:48.58:494,49,0	1/1:2,11:13:20.98:200,21,0	1/1:2,8:10:21.01:224,21,0	1/1:1,9:10:15.04:166,15,0	1/1:3,22:25:54.28:489,54,0	1/1:0,6:6:14.52:128,15,0	1/1:1,19:20:60.12:599,60,0	1/1:0,18:18:48.58:447,49,0	1/1:2,8:10:15.90:146,16,0	0/0:28,0:26:84.29:0,84,1705	0/0:19,0:19:57.20:0,57,1158	0/0:34,0:34:99:0,102,2049	0/0:25,0:25:75.26:0,75,1493
chr10	19288479	.	G	GA	1980.40	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=19.388;DP=568;FS=3.273;HRun=0;HaplotypeScore=174.8938;InbreedingCoeff=0.9870;MQ=79.00;MQ0=0;MQRankSum=-18.702;QD=7.59;ReadPosRankSum=2.286;VQSLOD=3.8914;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,12:12:19.31:72,19,0	0/0:10,0:10:30.10:0,30,419	0/0:23,0:23:43:0,43,682	0/0:18,0:18:50.35:0,50,615	0/0:32,0:32:87.29:0,87,1216	1/1:0,12:12:27.85:103,28,0	1/1:0,15:15:37.14:146,37,0	0/0:38,0:38:99:0,114,1576	1/1:0,19:19:37.91:139,38,0	1/1:0,18:18:43.97:219,44,0	1/1:0,16:16:38.60:150,39,0	1/1:1,21:22:48.25:201,48,0	0/0:37,0:37:99:0,111,1552	1/1:0,20:20:33.16:118,33,0	0/0:40,0:40:99:0,120,1661	1/1:0,24:24:42.11:157,42,0	1/1:0,11:11:17.75:72,18,0	1/1:0,8:8:19.67:94,20,0	1/1:0,9:9:14.39:78,14,0	1/1:2,22:24:48.54:188,49,0	1/1:0,6:6:13.81:81,14,0	1/1:0,18:19:44.85:167,45,0	1/1:0,18:18:43.09:175,43,0	1/1:0,8:8:12.26:48,12,0	0/0:30,0:28:90.27:0,90,1224	0/0:19,0:19:57.19:0,57,797	0/0:35,0:35:99:0,102,1409	0/0:25,0:25:72.24:0,72,1006
chr10	19288480	.	CTTT	C	7431.37	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=18.994;DP=569;FS=3.236;HRun=4;HaplotypeScore=176.3262;InbreedingCoeff=0.9854;MQ=79.64;MQ0=0;MQRankSum=-18.570;QD=28.47;ReadPosRankSum=3.858;VQSLOD=2.2477;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,12:12:26.83:270,27,0	0/0:11,0:11:33.11:0,33,763	0/0:24,0:24:63.13:0,63,1175	0/0:17,0:18:45.92:0,46,866	0/0:32,0:32:93.31:0,93,2099	1/1:0,12:12:33.10:397,33,0	1/1:0,15:15:41.89:484,42,0	0/0:37,0:37:99:0,111,2349	1/1:0,19:19:45.14:536,45,0	1/1:0,18:18:54.17:670,54,0	1/1:0,16:16:44.98:534,45,0	1/1:0,21:22:60.11:689,60,0	0/0:37,0:37:99:0,111,2624	1/1:0,20:20:42.04:483,42,0	0/0:39,0:39:99:0,117,2732	1/1:0,24:24:51.07:596,51,0	1/1:0,11:11:17.35:211,17,0	1/1:0,8:8:21.07:264,21,0	1/1:0,9:9:15.05:188,15,0	1/1:2,22:24:62.90:680,63,0	1/1:0,6:6:11.30:141,11,0	1/1:1,18:19:57.11:649,57,0	1/1:0,18:18:41.37:501,41,0	1/1:0,8:8:11.39:141,11,0	0/0:30,0:28:90.31:0,90,2113	0/0:20,0:20:60.21:0,60,1403	0/0:36,0:36:99:0,108,2468	0/0:24,0:24:72.24:0,72,1659
chr10	19288897	.	TCC	T	9484.56	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-4.511;DP=477;FS=2.865;HRun=9;HaplotypeScore=101.2910;InbreedingCoeff=0.9294;MQ=86.02;MQ0=0;MQRankSum=-2.737;QD=27.49;ReadPosRankSum=6.717;VQSLOD=4.5672;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,27:33:72.16:821,72,0	0/0:2,0:4:8.94:0,9,85	0/0:23,0:22:45.97:0,46,691	0/0:20,0:21:50.68:0,51,640	0/0:7,0:7:3.01:0,3,39	1/1:0,25:25:69.21:804,69,0	1/1:4,17:21:45.12:524,45,0	0/0:11,0:20:24:0,24,251	1/1:0,12:12:33.10:384,33,0	1/1:5,23:28:66.13:736,66,0	1/1:2,15:17:36.10:419,36,0	1/1:3,14:17:45.13:519,45,0	0/0:1,0:4:8.63:0,9,83	1/1:2,13:15:39.11:454,39,0	0/0:6,0:16:30.05:0,30,297	1/1:2,26:28:78.23:909,78,0	1/1:1,15:16:42.12:489,42,0	1/1:2,8:10:24.07:280,24,0	1/1:3,14:17:45.13:523,45,0	1/1:5,30:35:84.24:978,84,0	1/1:0,9:9:27.08:315,27,0	1/1:7,13:20:30.07:350,30,0	1/1:0,18:18:42.12:490,42,0	1/1:5,19:24:42.12:489,42,0	0/0:9,0:9:12.05:0,12,111	0/0:9,0:9:6.86:0,7,51	0/0:8,0:10:21.40:0,21,186	0/0:5,0:7:9.02:0,9,99
chr10	19291666	.	T	TA	13770.24	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-7.142;DP=633;FS=5.036;HRun=1;HaplotypeScore=111.9964;InbreedingCoeff=0.9989;MQ=89.52;MQ0=0;MQRankSum=-3.932;QD=37.02;ReadPosRankSum=2.934;VQSLOD=4.7564;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,29:31:79.15:1113,79,0	0/0:9,0:9:26.19:0,26,150	0/0:30,0:30:90.23:0,90,1188	0/0:22,0:22:66.08:0,66,879	0/0:32,0:32:89.92:0,90,514	1/1:1,26:27:70.12:970,70,0	1/1:0,10:10:24.08:337,24,0	0/0:26,0:26:69.23:0,69,964	1/1:0,18:18:48.16:685,48,0	1/1:0,28:28:81.12:1107,81,0	1/1:0,20:20:54.14:740,54,0	1/1:0,23:23:60.20:848,60,0	0/0:21,0:21:36.04:0,36,297	1/1:0,18:18:42.14:593,42,0	0/0:23,0:23:69.22:0,69,948	1/1:0,29:29:78.26:1094,78,0	1/1:1,18:18:48.16:683,48,0	1/1:1,18:19:42.14:596,42,0	1/1:0,19:19:57.15:770,57,0	1/1:1,36:37:99:1505,108,0	1/1:0,16:16:39.13:547,39,0	1/1:1,25:26:73.49:1032,73,0	1/1:2,23:25:61.45:857,61,0	1/1:0,7:7:21.07:295,21,0	0/0:21,0:21:57.60:0,58,310	0/0:35,1:36:60.69:0,61,485	0/0:29,0:29:76.77:0,77,429	0/0:12,0:12:33:0,33,193
chr10	19292848	.	G	GT	1045.05	PASS	AB=0.919;AC=17;AF=0.304;AN=56;BaseQRankSum=11.367;DP=630;FS=172.752;HRun=3;HaplotypeScore=380.4036;InbreedingCoeff=-0.4396;MQ=42.50;MQ0=5;MQRankSum=-6.041;QD=2.52;ReadPosRankSum=-2.529;VQSLOD=-0.5819;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,1:23:5.62:0,6,535	0/1:18,0:17:4.98:5,0,200	0/0:14,0:5:15.03:0,15,189	0/0:17,0:10:30.09:0,30,395	0/1:29,2:31:40.69:41,0,152	0/0:13,2:15:33.28:0,33,475	0/1:17,2:19:41.28:41,0,438	0/1:23,7:29:99:226,0,500	0/0:22,0:22:60.62:0,61,797	0/1:23,1:22:32.95:33,0,416	0/1:25,1:25:39.64:40,0,151	0/1:12,3:15:63.60:64,0,343	0/1:20,9:30:99:291,0,749	0/1:24,4:28:99:130,0,638	0/0:37,2:39:30.56:0,31,1170	0/1:15,1:16:8.51:9,0,454	0/0:16,0:16:45.15:0,45,614	0/0:13,0:12:35.14:0,35,455	0/1:14,3:15:95.60:96,0,358	0/1:26,0:25:4.30:4,0,336	0/1:22,0:21:37.04:37,0,310	0/1:29,3:32:79.85:80,0,276	0/0:27,2:28:0.95:0,1,181	0/0:17,0:16:30.10:0,30,414	0/1:31,0:31:15.41:15,0,381	0/1:20,1:21:27.67:28,0,492	0/1:26,3:29:59.54:60,0,913	0/0:9,0:9:11.08:0,11,244
chr10	19292979	.	CAT	C	40.82	PASS	AB=0.831;AC=2;AF=0.036;AN=56;BaseQRankSum=11.182;DP=1010;FS=16.715;HRun=0;HaplotypeScore=510.0764;InbreedingCoeff=-0.0388;MQ=46.31;MQ0=3;MQRankSum=-7.739;QD=0.44;ReadPosRankSum=4.135;VQSLOD=0.1043;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:20:50.77:0,51,982	0/0:17,2:21:40.22:0,40,561	0/0:31,0:28:78.23:0,78,1382	0/0:29,0:25:67.44:0,67,1073	0/0:34,5:41:59.06:0,59,737	0/0:30,0:29:42.91:0,43,797	0/0:35,0:35:55.47:0,55,1122	0/0:55,0:55:99:0,150,2809	0/0:26,0:25:26.06:0,26,789	0/0:41,3:50:21.52:0,22,1385	0/1:36,5:42:21.67:22,0,754	0/0:37,0:37:51.91:0,52,998	0/0:33,0:34:65.29:0,65,1162	0/0:43,0:42:50.20:0,50,1071	0/0:53,0:53:63.74:0,64,1382	0/0:36,0:35:63.87:0,64,1154	0/0:20,0:20:21.37:0,21,714	0/0:20,0:19:50.87:0,51,883	0/0:19,0:18:47.90:0,48,706	0/1:34,15:50:99:107,0,564	0/0:48,0:47:99:0,105,2092	0/0:40,11:56:11.25:0,11,768	0/0:29,7:37:47.24:0,47,817	0/0:28,1:29:42.35:0,42,759	0/0:43,15:62:44.04:0,44,1631	0/0:37,6:43:75.01:0,75,1494	0/0:24,0:24:37.42:0,37,890	0/0:14,1:15:19.57:0,20,456
chr10	19293026	.	G	GGTGT	19182.63	PASS	AB=0.906;AC=41;AF=0.732;AN=56;BaseQRankSum=-3.308;DP=1368;FS=7.845;HRun=0;HaplotypeScore=669.1499;InbreedingCoeff=0.6345;MQ=43.00;MQ0=25;MQRankSum=-2.441;QD=16.17;ReadPosRankSum=0.257;VQSLOD=2.4043;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:28,1:33:20.12:379,20,0	0/0:23,0:25:14.43:0,14,460	0/1:55,0:22:0.74:1,0,212	0/0:52,0:32:34.21:0,34,445	0/1:67,0:75:9.94:10,0,646	1/1:14,18:34:41.94:726,42,0	1/1:17,18:41:4.83:1138,5,0	1/1:35,0:33:37.56:415,38,0	1/1:21,1:23:22.61:422,23,0	1/1:60,16:80:59.56:1444,60,0	1/1:25,11:41:31.90:583,32,0	1/1:11,20:36:53.01:1083,53,0	0/0:42,0:43:42.75:0,43,1024	1/1:27,22:47:80.93:1709,81,0	1/1:30,1:51:22.89:225,23,0	1/1:18,26:46:77.04:1744,77,0	1/1:13,13:28:47.63:1050,48,0	1/1:16,16:34:64.05:1230,64,0	0/1:16,5:22:13.79:512,0,14	1/1:41,23:79:44.77:1232,45,0	1/1:26,41:73:76.07:1924,76,0	1/1:44,17:72:66.49:1040,66,0	1/1:36,11:53:42.21:750,42,0	1/1:12,27:51:82.94:1546,83,0	0/1:79,0:89:18.95:19,0,1101	0/1:56,0:59:0.18:0,0,1313	0/0:42,0:46:73.92:0,74,1302	0/0:13,0:14:24.97:0,25,401
chr10	19293186	.	AG	A	2241.65	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=1.273;DP=765;FS=8.282;HRun=2;HaplotypeScore=98.2065;InbreedingCoeff=0.9998;MQ=74.57;MQ0=0;MQRankSum=0.065;QD=32.97;ReadPosRankSum=-1.615;VQSLOD=2.3475;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:78.25:0,78,1144	0/0:16,0:16:47.92:0,48,419	0/0:15,0:15:42.06:0,42,577	0/0:18,0:18:51.05:0,51,658	0/0:41,0:41:99:0,104,899	0/0:27,0:27:81.09:0,81,1076	0/0:20,0:20:60.19:0,60,877	1/1:0,36:36:99:1277,108,0	0/0:25,0:25:72.17:0,72,1040	0/0:49,0:49:99:0,147,2141	0/0:25,0:25:66.04:0,66,863	0/0:18,0:18:51.15:0,51,726	0/0:29,0:29:80.61:0,81,660	0/0:24,0:24:71.95:0,72,986	1/1:1,31:32:84.27:1087,84,0	0/0:37,0:37:99:0,111,1587	0/0:23,0:23:69.15:0,69,1004	0/0:15,0:15:45.08:0,45,646	0/0:31,0:31:87.24:0,87,1239	0/0:29,0:29:80.95:0,81,1089	0/0:16,0:16:48.16:0,48,718	0/0:49,0:49:99:0,118,1732	0/0:30,0:30:87.13:0,87,1216	0/0:25,0:25:72.11:0,72,1009	0/0:33,0:32:89.82:0,90,734	0/0:42,0:42:99:0,123,1022	0/0:23,0:23:62.93:0,63,533	0/0:11,0:11:32.94:0,33,267
chr10	19293188	.	G	GA	5852.24	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-9.147;DP=779;FS=2.340;HRun=7;HaplotypeScore=88.5533;InbreedingCoeff=0.9999;MQ=73.82;MQ0=0;MQRankSum=-2.393;QD=28.27;ReadPosRankSum=2.133;VQSLOD=5.3419;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:78.10:0,78,746	1/1:2,15:17:39.59:472,40,0	0/0:15,0:15:39.06:0,39,375	0/0:17,0:17:42.06:0,42,402	1/1:6,36:42:46.21:824,46,0	0/0:28,0:28:63.08:0,63,602	0/0:20,0:20:57.09:0,57,550	0/0:38,0:38:75.58:0,76,292	0/0:24,0:24:66.10:0,66,637	0/0:52,0:52:99:0,138,1332	0/0:25,0:25:54.06:0,54,515	0/0:17,0:17:45.07:0,45,434	1/1:1,30:31:78.24:942,78,0	0/0:24,0:24:62.95:0,63,588	0/0:32,0:32:72.57:0,73,273	0/0:37,0:37:99:0,99,956	0/0:23,0:23:66.10:0,66,637	0/0:16,0:16:45.05:0,45,428	0/0:30,0:30:75.10:0,75,719	0/0:29,0:29:66.07:0,66,630	0/0:17,0:17:48.06:0,48,457	0/0:46,0:47:99:0,110,1027	0/0:29,0:29:78.12:0,78,753	0/0:25,0:25:66.05:0,66,628	1/1:1,32:32:84.26:1014,84,0	1/1:4,40:44:99:1456,123,0	1/1:6,22:28:60.18:725,60,0	1/1:1,11:12:36.08:419,36,0
chr10	19295120	.	TGAGA	T	6780.29	PASS	AB=1.000;AC=49;AF=0.875;AN=56;BaseQRankSum=-0.866;DP=600;FS=0.633;HRun=0;HaplotypeScore=177.3874;InbreedingCoeff=0.6942;MQ=64.03;MQ0=15;MQRankSum=0.258;QD=14.33;ReadPosRankSum=4.576;VQSLOD=4.4284;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,4:23:20.94:240,21,0	1/1:5,5:10:21.07:321,21,0	0/0:45,0:23:24.17:0,24,273	0/0:52,0:25:18.12:0,18,480	1/1:8,5:13:15.03:205,15,0	1/1:5,3:9:3.01:46,3,0	1/1:21,4:24:29.98:377,30,0	0/1:24,0:22:10.68:11,0,100	1/1:9,4:13:11.77:123,12,0	1/1:15,10:26:42.39:645,42,0	1/1:6,6:13:6.02:83,6,0	1/1:15,13:31:27.01:324,27,0	1/1:15,4:18:42.02:503,42,0	1/1:16,15:31:26.80:350,27,0	0/0:11,0:30:33.66:0,34,146	1/1:11,14:25:41.96:540,42,0	1/1:13,4:17:16.46:278,16,0	1/1:12,3:15:32.89:410,33,0	1/1:10,1:11:15:183,15,0	1/1:17,4:22:21.27:203,21,0	1/1:18,1:19:6.02:77,6,0	1/1:15,9:25:17.81:194,18,0	1/1:9,7:18:14.57:161,15,0	1/1:13,2:15:8.96:172,9,0	1/1:12,9:21:14.62:151,15,0	1/1:14,4:18:39.10:548,39,0	1/1:13,9:23:38.74:521,39,0	1/1:5,1:6:9.02:115,9,0
chr10	19295138	.	AGAGAGT	A	7020.28	PASS	AB=1.000;AC=48;AF=0.857;AN=56;BaseQRankSum=1.450;DP=680;FS=4.916;HRun=0;HaplotypeScore=216.4921;InbreedingCoeff=0.4866;MQ=43.62;MQ0=36;MQRankSum=0.110;QD=13.07;ReadPosRankSum=0.926;VQSLOD=3.2433;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:24:17.62:176,18,0	1/1:12,0:12:24.02:368,24,0	0/0:45,0:16:7.51:0,8,134	0/0:69,0:20:2.67:0,3,276	1/1:21,0:19:11.89:109,12,0	1/1:14,0:14:5.26:35,5,0	1/1:22,0:20:26.94:345,27,0	0/1:31,0:25:59.40:59,0,213	1/1:13,0:13:11.98:158,12,0	1/1:24,0:23:64.99:906,65,0	1/1:16,1:17:8.71:63,9,0	1/1:22,14:35:27.08:481,27,0	1/1:22,0:21:42.79:445,43,0	1/1:29,0:29:29.46:359,29,0	0/0:28,0:27:27.54:0,28,571	1/1:31,0:31:41.45:637,41,0	1/1:20,0:20:10.49:306,10,0	1/1:21,0:21:21.41:329,21,0	0/1:14,0:13:7.06:157,0,7	1/1:23,0:22:20.94:233,21,0	1/1:16,0:17:6.02:80,6,0	1/1:23,0:23:14.93:118,15,0	1/1:21,0:20:11.78:100,12,0	1/1:18,0:18:14.36:163,14,0	1/1:26,0:24:12.05:107,12,0	1/1:27,0:26:58.87:642,59,0	1/1:23,0:23:44.52:591,45,0	1/1:8,0:7:0.17:54,0,0
chr10	19295144	.	TGA	T	3040.44	PASS	AB=0.816;AC=43;AF=0.796;AN=54;BaseQRankSum=3.708;DP=679;FS=17.635;HRun=0;HaplotypeScore=204.0955;InbreedingCoeff=0.4256;MQ=39.65;MQ0=43;MQRankSum=-2.187;QD=6.20;ReadPosRankSum=3.499;VQSLOD=2.1139;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:13,8:21:8.09:54,0,8	1/1:9,3:12:15.01:153,15,0	0/0:44,0:10:8.44:0,8,38	0/0:75,1:19:9.75:0,10,107	1/1:10,10:19:2.98:21,3,0	1/1:8,8:16:1.40:31,1,0	1/1:16,5:19:12.28:105,12,0	0/1:32,0:25:0.45:0,0,401	1/1:9,4:13:5.80:32,6,0	1/1:11,12:23:43.30:480,43,0	0/0:12,5:17:0.47:0,0,1	1/1:20,15:34:26.02:242,26,0	0/1:13,8:20:5.52:159,0,6	1/1:11,18:29:14.50:123,15,0	0/0:28,1:28:16.66:0,17,151	1/1:11,18:29:28.03:300,28,0	1/1:13,7:20:6.38:145,6,0	1/1:15,6:21:4.48:215,4,0	1/1:8,4:11:15.04:165,15,0	1/1:13,11:23:7.03:51,7,0	1/1:15,3:18:5.47:25,5,0	./.	1/1:9,10:20:2.22:7,2,0	1/1:10,6:16:5.86:69,6,0	1/1:13,13:24:4.87:26,5,0	1/1:17,11:27:27.96:409,28,0	1/1:12,11:23:32.72:346,33,0	1/1:7,0:6:5.44:27,5,0
chr10	19295162	.	AGT	A	1403.14	PASS	AB=0.977;AC=31;AF=0.574;AN=54;BaseQRankSum=1.183;DP=685;FS=27.421;HRun=0;HaplotypeScore=224.8000;InbreedingCoeff=-0.2322;MQ=31.06;MQ0=39;MQRankSum=-0.514;QD=2.38;ReadPosRankSum=5.674;VQSLOD=1.1333;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:22:22.74:38,0,23	0/1:9,2:11:19.70:106,0,20	0/1:51,0:8:6.87:7,0,94	0/1:78,0:9:32.90:33,0,164	0/1:21,1:20:0.17:0,0,0	0/1:18,2:20:11.03:13,0,11	0/1:23,0:21:3.98:60,0,4	0/0:32,0:26:49.15:0,49,724	0/1:14,0:13:9.63:31,0,10	0/1:28,1:28:99:211,0,101	0/0:14,2:16:5.94:0,6,44	0/1:35,1:35:19.89:93,0,20	0/1:24,0:23:38.75:39,0,97	1/1:24,1:25:11.54:68,12,0	0/0:30,0:29:18.89:0,19,408	1/1:23,2:25:11.85:171,12,0	0/1:19,1:20:44.05:59,0,44	0/1:16,0:16:4.17:87,0,4	1/1:8,0:8:14.38:113,14,0	1/1:19,0:19:2.03:33,2,0	0/1:17,0:16:0.96:15,0,1	./.	1/1:22,3:24:2.90:16,3,0	1/1:15,1:15:4.07:27,4,0	1/1:26,1:26:0.84:2,1,0	0/1:27,0:26:9.29:183,0,9	0/1:29,0:28:92.23:124,0,92	0/1:5,0:4:7.22:25,0,7
chr10	19295164	.	TGA	T	161.95	PASS	AB=0.989;AC=20;AF=0.385;AN=52;BaseQRankSum=1.324;DP=675;FS=22.056;HRun=0;HaplotypeScore=229.7546;InbreedingCoeff=0.0204;MQ=30.67;MQ0=35;MQRankSum=-0.156;QD=0.50;ReadPosRankSum=0.816;VQSLOD=1.2465;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:21,1:22:12.61:18,0,13	0/1:10,0:10:34.99:35,0,76	0/0:49,0:7:5.73:0,6,181	0/0:75,0:9:11.92:0,12,150	./.	0/1:20,0:20:2.04:8,0,2	1/1:22,0:21:4.76:34,5,0	0/0:32,0:26:59.88:0,60,805	0/1:13,0:13:15.91:16,0,33	0/1:29,0:28:37.77:38,0,251	0/0:17,0:17:6.02:0,6,75	0/1:35,0:34:2.72:3,0,68	0/0:24,0:24:17.04:0,17,214	1/1:25,1:26:7.08:65,7,0	0/0:29,0:28:35.34:0,35,461	0/1:25,0:25:12.80:42,0,13	0/1:20,0:20:8.66:9,0,80	0/1:15,0:15:14.59:15,0,32	0/0:9,0:9:12.22:0,12,59	1/1:18,0:19:0.32:8,0,0	0/0:15,0:14:2.04:0,2,6	./.	1/1:24,1:25:0.47:1,0,0	1/1:15,0:14:1.52:4,2,0	0/0:28,0:27:2.61:0,3,16	0/1:27,0:26:9.14:9,0,144	0/0:30,0:29:26.61:0,27,297	0/0:4,0:4:6.36:0,6,28
chr10	19295182	.	T	TGAGA	4278.90	PASS	AB=0.784;AC=38;AF=0.704;AN=54;BaseQRankSum=-2.378;DP=706;FS=4.627;HRun=0;HaplotypeScore=258.2014;InbreedingCoeff=0.2679;MQ=30.23;MQ0=28;MQRankSum=-0.536;QD=8.04;ReadPosRankSum=0.993;VQSLOD=3.7506;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:17,11:29:2.38:14,2,0	1/1:5,0:10:4.51:28,5,0	0/0:44,0:7:8.94:0,9,104	0/0:61,0:11:2.56:0,3,9	0/1:10,0:16:0:0,0,0	1/1:11,14:24:9.75:226,10,0	1/1:7,15:21:2.18:34,2,0	1/1:40,1:34:54.86:722,55,0	1/1:8,8:15:9.37:153,9,0	0/1:24,7:30:5.85:688,0,6	1/1:15,4:19:5.52:87,6,0	1/1:24,8:32:26:425,26,0	0/1:14,0:25:19.30:79,0,19	1/1:19,7:27:11.37:223,11,0	1/1:33,0:31:12.26:134,12,0	1/1:25,9:34:11.93:168,12,0	0/1:11,4:17:4.43:378,0,4	1/1:9,4:13:25.50:441,26,0	1/1:8,2:7:17.71:236,18,0	0/1:16,5:22:0.02:0,0,0	1/1:16,2:17:3.01:32,3,0	0/1:19,3:22:0:0,0,0	./.	0/0:8,3:12:0:0,0,0	0/0:18,0:30:3.01:0,3,39	0/1:19,0:27:37.89:73,0,38	1/1:22,0:34:24.59:135,25,0	0/1:5,0:6:2.49:2,0,9
chr10	19295194	.	AGT	A	1435.97	PASS	AB=0.981;AC=22;AF=0.393;AN=56;BaseQRankSum=3.008;DP=680;FS=5.861;HRun=0;HaplotypeScore=232.6080;InbreedingCoeff=-0.1372;MQ=30.44;MQ0=19;MQRankSum=-0.672;QD=3.23;ReadPosRankSum=1.089;VQSLOD=2.0317;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:30:0.20:0,0,0	1/1:9,0:9:7.54:74,8,0	0/0:47,0:9:14.43:0,14,211	0/1:50,0:9:9.15:17,0,9	0/1:14,1:15:0:0,0,0	0/0:23,0:22:2.15:0,2,33	0/0:25,0:24:2.56:0,3,31	0/1:40,0:35:45.06:45,0,444	0/0:13,0:13:10.74:0,11,79	0/1:24,0:23:99:106,0,179	0/0:18,0:18:8.93:0,9,70	0/1:25,0:25:63.42:78,0,63	0/1:27,0:26:3.73:293,0,4	0/1:25,0:25:4.58:5,0,39	0/1:29,0:27:41.87:141,0,42	0/1:30,0:30:16.96:17,0,100	0/1:15,1:16:26.63:27,0,62	0/1:17,0:17:32.61:33,0,113	0/1:17,0:12:16.49:16,0,76	0/0:23,0:23:4.84:0,5,30	0/1:18,0:18:6.95:7,0,22	0/0:22,0:22:11.87:0,12,112	0/0:25,0:25:0:0,0,0	0/0:13,1:13:2.98:0,3,23	0/0:25,0:24:2.84:0,3,20	1/1:32,0:31:10.88:249,11,0	1/1:33,1:33:3.13:422,3,0	0/1:5,1:6:9.49:52,0,9
chr10	19295208	.	AGTGT	A	2287.22	PASS	AB=0.974;AC=19;AF=0.352;AN=54;BaseQRankSum=5.115;DP=651;FS=1.819;HRun=0;HaplotypeScore=217.4682;InbreedingCoeff=0.3582;MQ=33.09;MQ0=24;MQRankSum=-4.451;QD=7.89;ReadPosRankSum=4.375;VQSLOD=2.7033;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:29:0.03:0,0,0	1/1:6,0:6:8.59:73,9,0	0/0:35,0:8:21.06:0,21,382	0/0:48,0:11:12.01:0,12,202	./.	0/0:24,0:24:8.11:0,8,54	0/0:22,0:22:2.61:0,3,14	0/1:40,0:34:60.31:60,0,140	0/0:18,0:18:1.48:0,1,111	0/1:21,0:20:1.31:1,0,298	0/0:15,0:16:9.03:0,9,134	0/0:22,0:22:8.64:0,9,147	1/1:19,2:20:32.71:524,33,0	0/1:25,0:25:1.46:1,0,90	0/1:23,4:25:99:107,0,228	0/0:32,0:32:13.41:0,13,180	0/1:16,1:17:32.23:32,0,102	0/0:15,0:16:22.10:0,22,246	0/1:25,0:15:22.50:22,0,187	0/0:20,0:20:12.51:0,13,82	0/0:27,0:28:8.07:0,8,93	0/0:24,0:24:11.37:0,11,106	0/0:23,0:23:0.88:0,1,2	0/0:17,1:17:3.01:0,3,33	1/1:17,0:16:2.86:21,3,0	1/1:23,3:26:51.59:678,52,0	1/1:27,1:27:54.55:749,55,0	1/1:6,0:5:15:184,15,0
chr10	19295212	.	TGA	T	3601.91	PASS	AB=0.829;AC=47;AF=0.870;AN=54;BaseQRankSum=0.580;DP=626;FS=6.312;HRun=0;HaplotypeScore=199.1206;InbreedingCoeff=0.5238;MQ=32.24;MQ0=28;MQRankSum=1.867;QD=7.01;ReadPosRankSum=1.219;VQSLOD=2.6927;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:23,6:28:0.02:0,0,0	1/1:6,0:6:1.75:18,2,0	0/0:34,0:7:20.41:0,20,137	0/0:46,0:9:8.53:0,9,61	./.	1/1:16,9:25:12.01:90,12,0	1/1:24,0:23:2.94:21,3,0	1/1:34,1:29:65.48:520,65,0	1/1:12,6:18:14.15:110,14,0	1/1:18,2:20:44.42:391,44,0	1/1:12,4:15:6:63,6,0	1/1:14,2:16:21.05:167,21,0	1/1:22,0:21:17.79:129,18,0	1/1:11,12:23:9:101,9,0	1/1:23,3:26:10.99:104,11,0	1/1:26,5:32:40.99:430,41,0	1/1:8,7:17:17.38:161,17,0	1/1:6,8:14:8.38:232,8,0	1/1:16,7:13:22.88:214,23,0	1/1:14,6:20:5.78:59,6,0	1/1:12,18:27:5.68:79,6,0	1/1:12,9:21:12.04:159,12,0	1/1:18,1:19:2.93:37,3,0	1/1:6,8:14:3.01:40,3,0	0/0:21,0:20:2.84:0,3,20	1/1:26,0:25:15.85:173,16,0	1/1:27,0:26:49.66:274,50,0	1/1:6,0:5:3.01:29,3,0
chr10	19295216	.	AGAGAGTGTGTGT	A	4964.33	PASS	AB=1.000;AC=16;AF=0.296;AN=54;BaseQRankSum=4.534;DP=636;FS=1.086;HRun=0;HaplotypeScore=248.3778;InbreedingCoeff=0.5526;MQ=33.17;MQ0=32;MQRankSum=-4.241;QD=22.88;ReadPosRankSum=2.741;VQSLOD=3.8236;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:29:0.02:0,0,0	1/1:6,2:7:14.84:226,15,0	0/0:32,0:7:21.05:0,21,404	0/0:44,0:8:12.24:0,12,185	./.	0/0:26,0:26:10.43:0,10,141	0/1:24,0:22:12.97:13,0,34	0/1:37,0:29:99:274,0,482	0/0:18,0:18:14.71:0,15,181	0/0:21,0:21:33.93:0,34,669	0/0:15,0:14:3.87:0,4,101	0/0:22,0:22:38.02:0,38,556	1/1:14,8:21:47.74:1058,48,0	0/0:21,0:21:9.21:0,9,219	0/0:20,0:25:8.47:0,8,692	0/0:33,0:32:45.39:0,45,879	0/1:16,0:16:14.40:14,0,240	0/0:14,0:14:18.42:0,18,363	0/0:21,0:12:22.60:0,23,347	0/0:20,0:20:11.70:0,12,159	0/0:32,0:29:12.46:0,12,226	0/0:23,0:23:14.45:0,14,359	0/0:21,0:21:3.01:0,3,74	0/0:15,0:14:3.01:0,3,80	1/1:12,8:20:2.53:56,3,0	1/1:16,8:25:40.45:1350,40,0	1/1:9,18:28:60.32:1554,60,0	1/1:2,4:5:15:417,15,0
chr10	19295218	.	AGAGT	A	4577.25	PASS	AB=0.896;AC=42;AF=0.778;AN=54;BaseQRankSum=4.068;DP=647;FS=8.384;HRun=0;HaplotypeScore=218.1276;InbreedingCoeff=0.3821;MQ=33.57;MQ0=32;MQRankSum=-0.559;QD=8.60;ReadPosRankSum=5.537;VQSLOD=2.5928;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:23,7:29:0.03:0,0,0	0/1:9,0:8:10:37,0,10	0/0:31,0:7:20.41:0,20,137	0/0:44,0:8:8.69:0,9,58	./.	1/1:18,3:26:14.20:114,14,0	0/1:21,4:24:2.58:34,0,3	0/1:38,0:28:31.87:358,0,32	1/1:15,2:19:14.19:174,14,0	1/1:15,1:22:50.03:642,50,0	1/1:11,1:14:6:63,6,0	1/1:18,2:23:12.74:249,13,0	1/1:23,0:22:41.93:286,42,0	1/1:17,2:22:1.35:92,1,0	0/0:28,0:26:11.87:0,12,185	1/1:23,11:33:28.64:553,29,0	1/1:15,0:16:16.47:183,16,0	1/1:13,0:14:8.37:238,8,0	1/1:18,0:11:22.05:211,22,0	0/1:14,1:21:3.89:90,0,4	1/1:30,1:29:5.69:79,6,0	1/1:15,5:23:12.51:156,13,0	1/1:7,7:21:2.99:37,3,0	1/1:15,0:14:3.01:38,3,0	0/1:21,0:21:0.27:1,0,0	1/1:25,0:24:11.68:345,12,0	1/1:28,0:28:56.58:504,57,0	1/1:6,0:5:13.67:92,14,0
chr10	19295244	.	TGTGAGA	T	458.92	PASS	AB=0.949;AC=15;AF=0.268;AN=56;BaseQRankSum=8.261;DP=693;FS=11.697;HRun=0;HaplotypeScore=283.5015;InbreedingCoeff=0.3659;MQ=41.25;MQ0=25;MQRankSum=-8.456;QD=1.79;ReadPosRankSum=2.365;VQSLOD=0.9747;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:12,15:26:0.06:0,0,0	0/1:10,0:9:4.60:17,0,5	0/0:27,0:7:7.13:0,7,131	0/0:41,0:8:7.99:0,8,104	1/1:16,0:16:0.47:1,0,0	0/1:23,0:23:0.07:0,0,274	0/0:24,0:21:25.28:0,25,537	0/1:37,0:29:3.78:4,0,881	1/1:4,15:19:11.59:165,12,0	0/1:30,0:30:8.32:8,0,983	0/0:16,0:15:14.93:0,15,253	0/0:28,0:28:9.46:0,9,813	1/1:24,0:23:18.15:133,18,0	0/0:27,0:27:32.32:0,32,563	0/0:33,0:32:48.65:0,49,968	0/0:33,1:32:59.69:0,60,844	0/0:15,0:15:9.84:0,10,362	0/0:15,0:14:10.54:0,11,344	0/0:14,0:11:33.11:0,33,483	0/0:26,0:26:44.71:0,45,816	0/0:39,0:35:33.12:0,33,539	0/0:32,0:32:47.73:0,48,783	0/0:20,0:20:15.05:0,15,247	0/0:16,0:15:18.06:0,18,297	0/0:28,0:28:2.85:0,3,34	0/1:30,0:28:99:109,0,117	0/1:34,0:33:14:131,0,14	1/1:7,0:6:6.39:38,6,0
chr10	19295262	.	AGAGTGTGTGTGT	A	5313.03	PASS	AB=0.967;AC=13;AF=0.232;AN=56;BaseQRankSum=8.546;DP=761;FS=7.418;HRun=0;HaplotypeScore=342.3056;InbreedingCoeff=0.8011;MQ=53.07;MQ0=15;MQRankSum=-8.494;QD=34.06;ReadPosRankSum=3.882;VQSLOD=3.0207;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:25:9.03:0,9,451	1/1:13,1:14:21.07:619,21,0	0/0:46,0:15:39.85:0,40,1470	0/0:44,0:25:45.82:0,46,2067	1/1:17,1:18:0.47:1,0,0	0/0:25,0:25:32.73:0,33,1642	0/0:31,0:29:59.86:0,60,2932	0/0:39,0:33:91.53:0,92,3361	0/0:21,0:21:18.19:0,18,796	0/0:30,0:30:87.19:0,87,3977	0/0:18,0:18:26.99:0,27,1396	0/0:29,0:29:64.10:0,64,3168	1/1:24,1:24:35.81:1067,36,0	0/0:35,0:35:51.14:0,51,2628	0/0:31,0:31:60.21:0,60,3309	0/0:36,0:35:76.48:0,76,3270	0/0:23,0:23:60.20:0,60,2630	0/0:19,0:18:39.13:0,39,1895	0/0:17,0:15:45.15:0,45,1760	0/0:22,0:22:54.19:0,54,2717	0/0:38,0:38:48.41:0,48,2409	0/0:34,0:34:59.91:0,60,3056	0/0:19,0:19:27.09:0,27,1311	0/0:22,0:21:32.83:0,33,1710	1/1:27,3:30:2.63:20,3,0	0/1:28,1:28:92.64:1743,0,93	1/1:29,1:30:52.88:1381,53,0	1/1:6,4:9:15.05:483,15,0
chr10	19295264	.	AGTGTGTGTGT	A	5704.67	PASS	AB=0.592;AC=13;AF=0.232;AN=56;BaseQRankSum=6.926;DP=766;FS=9.592;HRun=0;HaplotypeScore=325.0246;InbreedingCoeff=0.8166;MQ=53.44;MQ0=15;MQRankSum=-9.351;QD=36.34;ReadPosRankSum=3.846;VQSLOD=2.8209;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:26:8.43:0,8,557	1/1:2,13:15:21.07:657,21,0	0/0:48,0:16:45.75:0,46,1612	0/0:46,0:26:52.75:0,53,2093	1/1:2,17:19:0.47:1,0,0	0/0:23,0:23:32.95:0,33,1522	0/0:30,0:29:59.88:0,60,2660	0/0:16,0:33:93.29:0,93,3210	0/0:21,0:21:21.07:0,21,738	0/0:31,0:31:90.29:0,90,3699	0/0:18,0:18:26.97:0,27,1266	0/0:29,0:29:63.22:0,63,2909	1/1:5,20:24:36.12:1066,36,0	0/0:35,0:35:50.98:0,51,2396	0/0:30,0:30:60.21:0,60,2943	0/0:36,0:35:74.76:0,75,3003	0/0:23,0:23:60.20:0,60,2413	0/0:19,0:18:39.13:0,39,1767	0/0:17,0:15:45.13:0,45,1545	0/0:23,0:23:57.20:0,57,2525	0/0:37,0:38:51.42:0,51,2315	0/0:34,0:34:59.98:0,60,2757	0/0:19,0:19:27.09:0,27,1206	0/0:23,0:22:32.69:0,33,1553	1/1:7,23:30:5.60:40,6,0	0/1:9,20:28:62.88:1933,0,63	1/1:6,24:30:49.72:1523,50,0	1/1:5,4:8:15.05:485,15,0
chr10	19295926	.	TCACG	T	5292.07	PASS	AB=0.545;AC=13;AF=0.232;AN=56;BaseQRankSum=10.450;DP=603;FS=0.407;HRun=0;HaplotypeScore=108.1163;InbreedingCoeff=0.8989;MQ=90.69;MQ0=0;MQRankSum=-4.039;QD=48.11;ReadPosRankSum=3.942;VQSLOD=5.5720;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,120,3014	1/1:0,10:10:30.10:560,30,0	0/0:21,0:21:57.14:0,57,1357	0/0:29,0:29:74.99:0,75,1813	1/1:2,16:18:42.14:783,42,0	0/0:20,0:20:60.19:0,60,1526	0/0:25,0:25:69.22:0,69,1744	0/0:29,0:29:84.29:0,84,1508	0/0:20,0:20:60.21:0,60,1561	0/0:20,0:20:48.16:0,48,1238	0/0:16,0:16:45.15:0,45,1188	0/0:20,0:20:54.19:0,54,1397	1/1:3,25:28:78.27:1450,78,0	0/0:17,0:17:45.15:0,45,1192	0/0:27,0:27:69.24:0,69,1803	0/0:14,0:14:42.14:0,42,1120	0/0:39,0:39:99:0,114,2934	0/0:21,0:21:63.19:0,63,1569	0/0:14,0:14:42.14:0,42,1074	0/0:15,0:15:45.15:0,45,1198	0/0:25,0:25:72.25:0,72,1907	0/0:19,0:19:57.19:0,57,1439	0/0:21,0:21:51.18:0,51,1356	0/0:35,0:35:96.31:0,96,2467	1/1:0,9:9:27.09:504,27,0	0/1:4,20:23:19.82:987,0,20	1/1:3,12:15:36.12:672,36,0	1/1:0,6:6:18.06:336,18,0
chr10	19296007	.	G	GGAGAGA	4448.38	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=7.020;DP=608;FS=4.083;HRun=0;HaplotypeScore=160.6249;InbreedingCoeff=0.9609;MQ=74.51;MQ0=1;MQRankSum=-9.433;QD=35.30;ReadPosRankSum=-3.779;VQSLOD=3.6163;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:54.89:0,55,1197	1/1:6,4:10:12.04:317,12,0	0/0:27,0:24:38.34:0,38,731	0/0:45,0:34:31.17:0,31,874	1/1:14,8:22:6.02:88,6,0	0/0:18,0:18:27.09:0,27,536	0/0:23,0:23:66.21:0,66,1368	0/0:25,0:25:63.20:0,63,1262	0/0:19,0:19:42.14:0,42,917	0/0:14,0:14:39.12:0,39,800	0/0:11,0:11:18.06:0,18,389	0/0:23,0:23:69.17:0,69,1379	1/1:13,12:25:44.97:1194,45,0	0/0:15,0:15:33.10:0,33,680	0/0:21,0:21:63.17:0,63,1217	0/0:13,0:13:24.08:0,24,524	0/0:36,0:36:66.23:0,66,1440	0/0:17,0:17:42.14:0,42,916	0/0:21,0:21:39.13:0,39,813	0/0:15,0:15:26.43:0,26,588	0/0:36,0:36:77.78:0,78,1606	0/0:15,0:15:33.10:0,33,662	0/0:18,0:18:42.14:0,42,899	0/0:32,0:32:69.20:0,69,1394	1/1:12,11:23:21.63:617,22,0	1/1:13,2:17:33.10:870,33,0	1/1:14,8:21:39.13:1116,39,0	1/1:5,2:7:9.03:246,9,0
chr10	19296041	.	A	AGTGT	1309.74	PASS	AB=0.914;AC=32;AF=0.727;AN=44;BaseQRankSum=-2.156;DP=544;FS=1.607;HRun=0;HaplotypeScore=122.3604;InbreedingCoeff=-0.0394;MQ=56.42;MQ0=31;MQRankSum=2.074;QD=3.18;ReadPosRankSum=-2.139;VQSLOD=1.7104;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:29:9.84:63,10,0	./.	./.	./.	./.	1/1:13,0:13:14.62:141,15,0	0/1:20,0:26:0:0,0,0	1/1:24,0:21:1.82:5,2,0	1/1:11,0:12:5.84:39,6,0	1/1:10,0:10:2.92:17,3,0	1/1:10,0:10:2.94:18,3,0	1/1:25,0:25:19.79:176,20,0	0/0:20,0:20:2.12:0,2,20	1/1:14,0:14:12.42:99,12,0	0/1:23,1:23:19.10:174,0,19	0/1:8,2:10:16.63:64,0,17	0/1:27,15:40:36.86:76,0,37	0/0:20,0:20:3.45:0,3,13	1/1:11,1:9:11.92:147,12,0	0/1:13,0:13:8.95:9,0,12	0/1:51,0:47:12.66:190,0,13	1/1:11,0:11:5.23:74,5,0	1/1:14,0:13:2.74:12,3,0	1/1:21,7:27:8.72:102,9,0	0/1:18,0:18:18.16:18,0,22	./.	0/1:20,0:16:14.14:14,0,41	./.
chr10	19296414	.	A	AT	2774.84	PASS	AB=0.832;AC=15;AF=0.268;AN=56;BaseQRankSum=8.129;DP=620;FS=4.812;HRun=11;HaplotypeScore=82.6717;InbreedingCoeff=0.7496;MQ=69.75;MQ0=2;MQRankSum=-7.996;QD=15.95;ReadPosRankSum=0.115;VQSLOD=4.2682;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,1:28:34.93:0,35,455	1/1:2,3:5:9.02:91,9,0	0/0:26,0:20:16.25:0,16,114	0/0:19,1:13:14.38:0,14,111	1/1:7,16:23:27.86:463,28,0	0/0:17,0:17:40.88:0,41,308	0/0:25,0:26:64.76:0,65,491	0/0:47,2:50:73.05:0,73,734	0/0:12,0:12:35.84:0,36,275	0/0:23,0:23:56.75:0,57,441	0/0:15,0:15:35.84:0,36,279	0/0:22,0:22:56.74:0,57,441	1/1:9,14:23:57.05:552,57,0	0/0:18,0:18:37.61:0,38,280	0/0:19,0:18:35.83:0,36,279	0/0:19,0:19:50.80:0,51,395	0/0:37,0:39:99:0,100,755	0/0:27,1:29:40.31:0,40,486	0/1:8,0:8:6.84:7,0,127	0/1:19,4:25:60.97:61,0,294	0/0:16,0:16:27.34:0,27,210	0/0:17,0:17:37.14:0,37,299	0/0:16,0:16:32.82:0,33,255	0/0:31,1:33:46.27:0,46,532	0/1:8,10:19:4.55:301,0,5	1/1:8,20:28:29.02:601,29,0	1/1:11,20:31:69.13:694,69,0	1/1:5,6:12:20.88:195,21,0
chr10	19296434	.	CT	C	2977	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=12.730;DP=636;FS=0.377;HRun=8;HaplotypeScore=81.2883;InbreedingCoeff=0.9601;MQ=67.09;MQ0=2;MQRankSum=-5.648;QD=20.39;ReadPosRankSum=0.002;VQSLOD=3.4094;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:75.20:0,75,871	1/1:1,4:5:9.01:87,9,0	0/0:22,0:15:26.01:0,26,314	0/0:19,0:12:6.01:0,6,162	1/1:4,19:23:56.92:509,57,0	0/0:16,0:16:45.11:0,45,521	0/0:24,0:24:61.96:0,62,726	0/0:46,0:46:99:0,117,1365	0/0:14,0:14:36.11:0,36,435	0/0:27,0:27:78.22:0,78,920	0/0:15,0:15:45.03:0,45,502	0/0:24,0:24:72.21:0,72,860	1/1:6,15:21:41.10:395,41,0	0/0:22,0:22:60.18:0,60,720	0/0:21,0:20:60.15:0,60,688	0/0:19,0:19:54.15:0,54,640	0/0:44,0:44:99:0,120,1434	0/0:29,0:29:78.17:0,78,911	0/0:11,0:11:16.56:0,17,269	0/0:25,0:25:66.19:0,66,785	0/0:13,1:14:10.28:0,10,406	0/0:21,0:21:45.07:0,45,513	0/0:18,0:18:54.11:0,54,632	0/0:31,0:31:75.12:0,75,829	1/1:8,16:24:51.05:487,51,0	1/1:7,25:32:44.88:716,45,0	1/1:3,24:26:72.10:690,72,0	1/1:0,14:14:30.05:290,30,0
chr10	19296750	.	C	CT	303.89	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-4.940;DP=582;FS=2.500;HRun=7;HaplotypeScore=58.4113;InbreedingCoeff=0.9856;MQ=72.44;MQ0=1;MQRankSum=-0.101;QD=20.26;ReadPosRankSum=-0.099;VQSLOD=3.1385;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:66.10:0,66,637	0/0:8,0:8:21.03:0,21,203	0/0:18,0:15:17.59:0,18,228	0/0:17,0:17:26.67:0,27,234	0/0:28,0:28:72.05:0,72,685	0/0:21,0:21:54.07:0,54,515	0/0:22,0:22:63.08:0,63,600	0/0:24,0:24:60.08:0,60,576	0/0:19,0:19:51.08:0,51,492	0/0:22,0:22:60.09:0,60,579	0/0:22,0:22:66.09:0,66,632	0/0:20,0:20:57.01:0,57,533	0/0:13,0:13:39.06:0,39,376	0/0:19,0:19:51.08:0,51,492	1/1:2,13:15:32.93:399,33,0	0/0:20,0:20:51.07:0,51,492	0/0:21,0:21:60.09:0,60,579	0/0:25,0:26:77.16:0,77,730	0/0:23,0:24:56.12:0,56,527	0/0:27,0:27:75.09:0,75,716	0/0:17,0:17:39.06:0,39,376	0/0:18,0:18:54.09:0,54,521	0/0:17,0:17:48.08:0,48,464	0/0:27,0:27:78.11:0,78,748	0/0:18,0:18:54.09:0,54,521	0/0:37,0:37:96.14:0,96,927	0/0:25,0:25:72.07:0,72,677	0/0:12,0:12:36.06:0,36,347
chr10	19297248	.	A	AT	5677.38	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=14.667;DP=546;FS=2.247;HRun=1;HaplotypeScore=71.6732;InbreedingCoeff=0.9920;MQ=76.18;MQ0=0;MQRankSum=0.217;QD=42.37;ReadPosRankSum=2.135;VQSLOD=5.2483;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,111,1410	1/1:0,11:11:30.10:449,30,0	0/0:6,0:6:18.05:0,18,220	0/0:17,0:17:21.38:0,21,290	1/1:0,12:12:36.12:539,36,0	0/0:16,0:16:45.13:0,45,570	0/0:22,0:22:60.14:0,60,720	0/0:24,0:24:72.19:0,72,893	0/0:22,0:22:66.21:0,66,856	0/0:31,0:31:93.30:0,93,1206	0/0:14,0:14:42.14:0,42,545	0/0:18,0:18:54.18:0,54,700	1/1:1,21:22:66.18:963,66,0	0/0:13,0:13:36.11:0,36,451	0/0:30,0:30:87.28:0,87,1125	0/0:11,0:11:33.11:0,33,428	0/0:27,0:27:81.25:0,81,1037	0/0:19,0:19:57.16:0,57,724	0/0:21,0:21:60.17:0,60,741	0/0:18,0:18:51.17:0,51,661	0/0:20,0:20:57.15:0,57,706	0/0:12,0:12:36.12:0,36,467	0/0:11,0:11:33.11:0,33,428	0/0:20,0:20:48.16:0,48,623	1/1:0,18:18:48.16:719,48,0	1/1:0,31:31:93.32:1393,93,0	1/1:0,35:36:96.32:1434,96,0	1/1:0,4:4:12.04:180,12,0
chr10	19297339	.	T	TGTTGTTGTTG	7590.67	PASS	AB=0.872;AC=16;AF=0.286;AN=56;BaseQRankSum=-5.746;DP=612;FS=3.361;HRun=0;HaplotypeScore=159.4641;InbreedingCoeff=-0.4178;MQ=51.25;MQ0=36;MQRankSum=-3.126;QD=26.92;ReadPosRankSum=2.362;VQSLOD=4.5943;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:21:0.26:0,0,710	0/1:6,3:9:99:401,0,233	0/0:91,0:14:4.49:0,4,554	0/0:89,0:25:32.19:0,32,526	0/1:20,6:28:99:930,0,450	0/0:16,0:16:40.69:0,41,802	0/1:8,0:8:55.70:56,0,135	0/0:29,0:26:31.05:0,31,1042	0/1:14,0:13:25.08:25,0,389	0/1:23,0:22:10.61:11,0,837	0/0:17,0:17:40.07:0,40,658	0/1:4,0:9:40.10:40,0,165	0/1:15,2:18:99:610,0,353	0/0:12,0:12:31.91:0,32,567	0/0:23,0:23:43.11:0,43,1166	0/0:11,0:11:33.11:0,33,725	0/1:10,0:17:37.69:38,0,400	0/1:14,0:14:7.69:8,0,207	0/0:10,0:8:24.06:0,24,421	0/1:13,0:12:58.71:59,0,71	0/0:4,0:4:12.02:0,12,189	0/1:16,0:16:6.22:6,0,604	0/1:9,0:9:30.58:31,0,319	0/0:5,0:5:8.98:0,9,127	0/1:22,0:24:99:1154,0,455	0/1:17,9:27:99:1322,0,494	0/1:24,10:37:99:2496,0,514	0/1:11,2:10:99:406,0,177
chr10	19297346	.	T	TTTG	4946.31	PASS	AB=0.918;AC=37;AF=0.661;AN=56;BaseQRankSum=5.490;DP=589;FS=29.081;HRun=0;HaplotypeScore=109.4602;InbreedingCoeff=-0.1171;MQ=47.83;MQ0=29;MQRankSum=0.304;QD=11.34;ReadPosRankSum=5.183;VQSLOD=2.7700;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:20:24.26:209,24,0	1/1:9,0:9:24.91:212,25,0	0/0:74,0:12:26.67:0,27,192	0/0:75,0:20:21.44:0,21,162	1/1:26,0:27:16.64:308,17,0	0/1:16,0:16:52.85:120,0,53	0/1:2,1:15:18.34:33,0,18	0/1:28,0:25:95.84:96,0,139	0/1:18,0:17:26.88:151,0,27	1/1:17,0:17:0.29:190,0,0	1/1:16,0:16:12.68:165,13,0	0/1:8,0:9:14.17:55,0,14	1/1:17,0:17:42.29:323,42,0	0/1:14,0:14:34.56:127,0,35	0/1:23,0:23:99:161,0,128	0/1:12,0:12:42.26:42,0,83	0/1:11,0:11:48.13:48,0,52	0/1:4,0:16:18.89:19,0,30	1/1:10,0:8:4.80:76,5,0	1/1:3,0:14:5.69:60,6,0	0/1:4,0:4:13.22:24,0,13	0/1:17,0:17:49.68:173,0,50	0/1:10,0:10:1.32:81,0,1	0/0:4,0:4:2.22:0,2,7	1/1:18,0:25:53.65:533,54,0	1/1:26,0:27:67.15:607,67,0	1/1:42,0:42:99:972,109,0	1/1:11,0:9:4.08:161,4,0
chr10	19297963	.	GC	G	605.82	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.211;DP=453;FS=0.000;HRun=2;HaplotypeScore=47.1550;InbreedingCoeff=0.9876;MQ=88.20;MQ0=0;MQRankSum=-2.826;QD=31.89;ReadPosRankSum=1.653;VQSLOD=3.1551;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:78.26:0,78,1168	0/0:9,0:9:27.06:0,27,381	0/0:19,0:19:57.15:0,57,761	0/0:14,0:14:41.92:0,42,545	0/0:16,0:16:41.96:0,42,606	0/0:13,0:13:33.11:0,33,493	0/0:18,0:18:45.15:0,45,674	0/0:21,0:21:57.16:0,57,826	0/0:19,0:19:51.17:0,51,764	0/0:11,0:11:24.08:0,24,359	0/0:9,0:9:27.08:0,27,385	0/0:19,0:19:45.15:0,45,673	0/0:18,0:18:54.17:0,54,786	0/0:20,0:20:57.19:0,57,844	1/1:0,19:19:54.18:701,54,0	0/0:12,0:12:36.12:0,36,538	0/0:28,0:28:81.26:0,81,1193	0/0:12,0:12:33.10:0,33,474	0/0:9,0:9:24.05:0,24,330	0/0:12,0:12:30.10:0,30,449	0/0:22,0:22:66.19:0,66,944	0/0:13,0:13:39.13:0,39,583	0/0:15,0:15:39.13:0,39,582	0/0:17,0:17:51.17:0,51,763	0/0:11,0:11:30.10:0,30,444	0/0:10,0:10:30.10:0,30,449	0/0:30,0:30:78.06:0,78,1260	0/0:7,0:7:21.07:0,21,314
chr10	19299316	.	T	TTATTACTATTAC	1875.65	PASS	AB=1.000;AC=20;AF=0.400;AN=50;BaseQRankSum=-4.349;DP=244;FS=4.489;HRun=0;HaplotypeScore=82.7715;InbreedingCoeff=0.1677;MQ=58.85;MQ0=3;MQRankSum=-2.852;QD=10.31;ReadPosRankSum=-2.123;VQSLOD=1.0930;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:15:22.25:266,22,0	0/0:3,0:3:3.01:0,3,67	./.	./.	0/1:15,0:15:31.61:32,0,198	0/0:8,0:8:2.19:0,2,58	./.	1/1:34,0:34:84.20:1302,84,0	1/1:0,0:2:3.01:37,3,0	0/0:7,0:7:14.26:0,14,125	0/0:7,0:7:15:0,15,131	0/0:5,0:5:9:0,9,79	0/0:7,0:7:14.31:0,14,195	0/1:8,0:8:7.24:7,0,90	1/1:3,4:7:3.01:160,3,0	1/1:10,0:10:5.68:28,6,0	0/1:25,0:25:8.81:9,0,42	0/1:15,0:15:9.10:60,0,9	0/1:9,0:8:7.67:8,0,119	0/1:8,0:8:12.80:13,0,60	0/0:1,0:1:3:0,3,26	0/0:2,0:2:2.99:0,3,24	0/0:3,0:3:6.01:0,6,58	0/0:2,0:2:6.02:0,6,74	0/1:13,0:13:9.01:9,0,134	1/1:10,0:10:8.08:62,8,0	0/1:11,0:11:4.22:39,0,4	0/0:11,0:11:11.03:0,11,42
chr10	19299322	.	CTAT	C	725.48	PASS	AB=1.000;AC=15;AF=0.375;AN=40;BaseQRankSum=-0.908;DP=221;FS=3.836;HRun=0;HaplotypeScore=47.3079;InbreedingCoeff=0.5217;MQ=56.38;MQ0=3;MQRankSum=3.497;QD=9.42;ReadPosRankSum=-0.608;VQSLOD=1.9975;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:13.55:0,14,142	1/1:0,1:1:3.01:40,3,0	./.	./.	1/1:8,4:12:9.03:119,9,0	0/0:8,0:8:1.18:0,1,97	1/1:2,0:2:3.01:39,3,0	0/0:37,0:37:27.33:0,27,219	0/0:2,0:2:3.01:0,3,41	./.	./.	0/0:4,0:4:3.01:0,3,43	1/1:3,4:7:12.04:158,12,0	0/0:6,0:6:6.02:0,6,115	0/0:7,0:7:9.01:0,9,120	0/0:9,0:9:6:0,6,58	0/1:25,0:25:10.96:59,0,11	0/0:15,0:15:4.56:0,5,42	0/0:8,0:7:9.03:0,9,103	0/0:6,0:6:3.01:0,3,35	./.	./.	./.	0/0:2,0:2:3.01:0,3,58	1/1:5,4:9:12.04:158,12,0	./.	1/1:6,4:10:9.03:118,9,0	1/1:7,4:11:15.01:179,15,0
chr10	19299325	.	T	TTATTAC	1817.19	PASS	AB=0.990;AC=36;AF=0.692;AN=52;BaseQRankSum=-4.116;DP=222;FS=0.638;HRun=0;HaplotypeScore=51.7892;InbreedingCoeff=0.0814;MQ=56.50;MQ0=3;MQRankSum=-0.320;QD=11.08;ReadPosRankSum=1.715;VQSLOD=1.5139;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:11,0:12:30.27:30,0,77	0/0:1,0:1:3.01:0,3,37	./.	./.	0/0:11,0:11:26.87:0,27,253	1/1:2,6:8:12.03:165,12,0	1/1:2,0:2:3.01:39,3,0	0/0:35,0:35:95.16:0,95,560	1/1:2,0:2:3.01:66,3,0	1/1:7,0:7:8.20:101,8,0	1/1:6,0:6:14.98:123,15,0	1/1:3,0:3:5.99:50,6,0	0/1:7,0:7:18.95:19,0,140	0/1:5,0:5:36.96:37,0,102	0/1:7,0:7:62.91:63,0,88	1/1:1,7:9:6.02:208,6,0	1/1:3,23:27:8.94:155,9,0	1/1:1,16:19:6.02:180,6,0	1/1:3,5:7:14.27:305,14,0	1/1:1,5:6:5.95:91,6,0	1/1:1,0:1:3:25,3,0	1/1:1,0:1:3:25,3,0	1/1:2,0:2:5.94:43,6,0	0/1:2,0:2:9.98:10,0,51	0/1:9,0:9:29.81:30,0,114	0/0:9,0:9:23.73:0,24,165	0/1:10,0:10:67.91:68,0,105	0/1:11,0:11:87.68:145,0,88
chr10	19299866	.	AGGTGCTGCCTG	A	8199.20	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=14.837;DP=796;FS=6.049;HRun=0;HaplotypeScore=250.5485;InbreedingCoeff=0.9962;MQ=79.72;MQ0=0;MQRankSum=-12.980;QD=60.73;ReadPosRankSum=2.577;VQSLOD=4.1349;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,144,7824	1/1:0,9:9:21.07:759,21,0	0/0:18,0:18:54.12:0,54,2370	0/0:24,0:24:48.49:0,48,2127	1/1:0,15:15:27.09:970,27,0	0/0:25,0:25:72.25:0,72,3906	0/0:35,0:35:99:0,105,5284	0/0:30,0:30:90.29:0,90,4622	0/0:30,0:30:87.29:0,87,4546	0/0:36,0:36:99:0,105,5693	0/0:15,0:15:45.14:0,45,2395	0/0:50,0:50:99:0,147,8241	1/1:0,24:24:39.13:1358,39,0	0/0:34,0:34:99:0,102,5643	0/0:31,0:31:90.28:0,90,4836	0/0:31,0:31:93.29:0,93,5026	0/0:45,0:45:99:0,132,7348	0/0:25,0:25:72.22:0,72,3721	0/0:23,0:23:66.19:0,66,3374	0/0:22,0:22:66.23:0,66,3449	0/0:57,0:57:99:0,166,8779	0/0:24,0:24:72.19:0,72,3433	0/0:15,0:15:45.14:0,45,2410	0/0:42,0:42:99:0,120,6373	1/1:2,25:27:41.64:1346,42,0	1/1:2,25:27:65.85:1703,66,0	1/1:0,15:15:42.14:1520,42,0	1/1:0,18:18:15.05:543,15,0
chr10	19300249	.	CTCAT	C	4630.56	PASS	AB=0.863;AC=21;AF=0.404;AN=52;BaseQRankSum=-4.141;DP=732;FS=6.078;HRun=0;HaplotypeScore=158.7013;InbreedingCoeff=0.6099;MQ=64.90;MQ0=9;MQRankSum=-0.757;QD=13.62;ReadPosRankSum=2.139;VQSLOD=4.1150;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:22:8.99:76,9,0	1/1:9,7:16:22.89:319,23,0	0/0:25,0:17:3.01:0,3,33	./.	1/1:17,15:32:46.93:674,47,0	0/0:33,0:33:51.17:0,51,951	0/1:21,0:21:17.83:18,0,421	./.	1/1:26,0:26:39.02:352,39,0	0/0:29,0:28:45.15:0,45,792	0/0:29,0:29:48.15:0,48,871	0/1:32,0:32:10.25:10,0,575	1/1:16,13:30:33.10:492,33,0	0/0:26,0:26:24.05:0,24,418	0/1:19,0:40:1.91:421,0,2	0/0:35,0:35:48.16:0,48,894	0/0:22,0:22:39.09:0,39,685	0/0:20,0:20:33.11:0,33,614	0/0:20,0:20:15.05:0,15,266	0/0:35,0:35:60.14:0,60,1080	0/0:24,0:24:27.09:0,27,507	0/0:26,0:26:48.16:0,48,875	0/1:25,0:25:10.28:10,0,575	0/0:22,0:22:45.15:0,45,848	1/1:8,18:26:48.16:733,48,0	0/1:14,15:29:99:598,0,104	1/1:14,13:26:39.13:603,39,0	1/1:7,7:14:21.07:325,21,0
chr10	19300287	.	CATTCAT	C	936	PASS	AB=0.843;AC=3;AF=0.054;AN=56;BaseQRankSum=10.287;DP=699;FS=0.603;HRun=0;HaplotypeScore=195.9982;InbreedingCoeff=-0.0567;MQ=69.15;MQ0=11;MQRankSum=-8.528;QD=11.56;ReadPosRankSum=2.896;VQSLOD=2.8437;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:18,4:22:67.41:67,0,354	0/0:13,0:13:25.67:0,26,282	0/0:15,0:11:30.10:0,30,474	0/0:20,0:18:29.79:0,30,560	0/0:30,0:30:76.97:0,77,921	0/0:28,0:28:84.14:0,84,1773	0/0:25,0:25:63.66:0,64,1118	0/0:36,0:29:87.29:0,87,1350	0/1:15,13:28:99:484,0,205	0/0:22,0:21:63.04:0,63,1399	0/0:24,0:24:72.10:0,72,1572	0/0:22,0:22:52.45:0,52,1229	0/0:28,0:28:40.26:0,40,754	0/0:21,0:21:60.10:0,60,1180	0/1:31,0:31:99:485,0,399	0/0:28,0:28:84.13:0,84,1776	0/0:19,0:19:57.12:0,57,1268	0/0:24,0:24:72.07:0,72,1337	0/0:26,0:25:74.61:0,75,915	0/0:40,0:40:99:0,120,2301	0/0:27,0:27:81.04:0,81,1488	0/0:20,0:20:60.13:0,60,1447	0/0:24,0:24:59.38:0,59,1342	0/0:24,0:24:72.09:0,72,1535	0/0:28,0:28:76.15:0,76,714	0/0:28,0:28:82.34:0,82,939	0/0:29,0:28:82.44:0,82,825	0/0:14,0:14:38.15:0,38,445
chr10	19301235	.	TA	T	14091.64	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=14.860;DP=768;FS=5.402;HRun=3;HaplotypeScore=156.6647;InbreedingCoeff=0.9994;MQ=80.25;MQ0=0;MQRankSum=-2.895;QD=32.62;ReadPosRankSum=5.109;VQSLOD=3.6587;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,163,2332	0/0:11,0:11:33.11:0,33,475	0/0:21,0:21:56.80:0,57,731	0/0:19,0:19:50.73:0,51,669	0/0:29,0:29:87.29:0,87,1251	1/1:1,23:24:69.22:855,69,0	1/1:1,30:31:63.20:781,63,0	0/0:32,0:32:90.26:0,90,1268	0/0:31,0:31:93.27:0,93,1270	1/1:0,24:24:72.23:891,72,0	1/1:2,26:28:75.19:910,75,0	1/1:1,29:30:75.24:930,75,0	0/0:35,0:35:99:0,102,1447	1/1:0,17:17:51.16:632,51,0	0/0:27,0:27:78.25:0,78,1106	1/1:1,28:29:81.25:1004,81,0	1/1:1,52:53:99:1598,129,0	1/1:1,31:32:78.24:967,78,0	1/1:0,15:15:45.12:543,45,0	1/1:0,22:22:57.18:706,57,0	1/1:0,54:54:99:1822,147,0	1/1:1,21:22:60.19:743,60,0	1/1:1,16:17:42:520,42,0	1/1:0,34:34:96.30:1190,96,0	0/0:23,0:23:66.22:0,66,950	0/0:24,1:25:38.05:0,38,998	0/0:21,0:21:63.18:0,63,869	0/0:7,0:7:21.04:0,21,281
chr10	19302917	.	GA	G	11483.47	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-18.552;DP=723;FS=0.314;HRun=9;HaplotypeScore=88.6645;InbreedingCoeff=0.9975;MQ=72.25;MQ0=0;MQRankSum=-1.875;QD=23.58;ReadPosRankSum=1.037;VQSLOD=5.2865;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,22:24:66.04:604,66,0	0/0:0,0:14:39.77:0,40,202	0/0:18,0:17:32.93:0,33,337	0/0:10,0:9:15.39:0,15,136	0/0:6,0:36:88.32:0,88,470	1/1:3,22:25:57.03:522,57,0	1/1:0,18:18:42.02:384,42,0	1/1:2,19:21:56.98:506,57,0	1/1:1,22:23:57.03:522,57,0	1/1:4,32:36:96.05:878,96,0	1/1:2,13:15:39.01:357,39,0	1/1:3,29:32:81.04:741,81,0	0/0:9,0:29:65.53:0,66,350	1/1:2,26:28:72.04:659,72,0	1/1:2,32:34:87.04:796,87,0	1/1:1,30:31:90.05:824,90,0	1/1:3,16:19:45.02:412,45,0	1/1:2,21:23:60.03:549,60,0	1/1:1,22:23:66.03:604,66,0	1/1:7,31:38:90.03:823,90,0	1/1:1,17:18:45.02:412,45,0	1/1:7,30:37:93.03:846,93,0	1/1:1,20:21:54.02:494,54,0	1/1:0,21:21:60.03:549,60,0	0/0:4,0:39:96.75:0,97,511	0/0:2,2:32:30.61:0,31,352	0/0:4,0:43:93.67:0,94,496	0/0:1,0:14:31.25:0,31,159
chr10	19303320	.	GA	G	8698.77	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=7.260;DP=874;FS=3.955;HRun=4;HaplotypeScore=131.5985;InbreedingCoeff=1.0000;MQ=88.75;MQ0=0;MQRankSum=-2.834;QD=32.22;ReadPosRankSum=0.222;VQSLOD=3.4162;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,141,1913	1/1:2,15:17:39.12:468,39,0	0/0:27,0:27:78.23:0,78,1056	0/0:37,0:37:86.78:0,87,1249	1/1:2,34:36:99:1212,103,0	0/0:32,0:32:93.31:0,93,1302	0/0:35,0:35:96.30:0,96,1310	1/1:4,30:34:90.24:1055,90,0	0/0:28,0:28:81.24:0,81,1112	0/0:35,0:35:99:0,105,1445	0/0:17,0:17:48.14:0,48,638	0/0:37,0:37:99:0,105,1466	1/1:2,41:43:78.36:1361,78,0	0/0:27,0:27:81.27:0,81,1133	1/1:1,39:40:99:1260,105,0	0/0:41,0:41:99:0,117,1613	0/0:32,0:32:96.32:0,96,1344	0/0:13,0:13:36.12:0,36,504	0/0:30,0:30:84.27:0,84,1151	0/0:32,0:32:87.29:0,87,1214	0/0:54,0:54:99:0,159,2182	0/0:25,0:25:75.23:0,75,1020	0/0:22,0:22:63.19:0,63,858	0/0:32,0:32:93.31:0,93,1302	1/1:0,28:28:75.23:900,75,0	1/1:3,37:40:72.32:1290,72,0	1/1:0,19:19:57.17:684,57,0	1/1:0,13:13:39.12:468,39,0
chr10	19305770	.	AC	A	2574.33	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=4.089;DP=678;FS=2.894;HRun=1;HaplotypeScore=73.8956;InbreedingCoeff=0.9993;MQ=89.78;MQ0=0;MQRankSum=-2.608;QD=37.86;ReadPosRankSum=-3.961;VQSLOD=2.5781;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,117,1777	0/0:14,0:14:42.11:0,42,623	0/0:24,0:24:69.21:0,69,1044	0/0:27,0:27:70.71:0,71,1092	0/0:17,0:17:51.11:0,51,759	0/0:15,0:16:45.15:0,45,718	0/0:27,0:27:81.28:0,81,1290	1/1:0,39:39:99:1563,117,0	0/0:33,1:34:60.36:0,60,1491	0/0:22,0:22:66.22:0,66,1030	0/0:11,0:11:33.11:0,33,526	0/0:28,0:28:81.26:0,81,1268	0/0:37,0:37:99:0,111,1742	0/0:29,0:29:84.27:0,84,1302	1/1:0,29:29:81.27:1133,81,0	0/0:29,0:29:87.28:0,87,1365	0/0:21,0:21:63.17:0,63,957	0/0:22,0:22:66.23:0,66,1054	0/0:13,0:13:39.11:0,39,579	0/0:20,0:20:60.17:0,60,909	0/0:37,0:37:99:0,105,1636	0/0:23,0:23:66.17:0,66,1001	0/0:17,0:17:51.17:0,51,794	0/0:18,0:18:54.16:0,54,838	0/0:18,0:18:54.18:0,54,859	0/0:19,0:19:57.19:0,57,888	0/0:38,0:38:99:0,114,1820	0/0:9,0:9:27.09:0,27,431
chr10	19306993	.	T	TA	9662.62	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=-1.185;DP=664;FS=6.444;HRun=9;HaplotypeScore=87.7398;InbreedingCoeff=0.9960;MQ=76.88;MQ0=0;MQRankSum=-1.791;QD=25.97;ReadPosRankSum=-0.665;VQSLOD=4.7280;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,1:35:51.85:0,52,655	0/0:12,0:12:32.99:0,33,286	0/0:21,1:22:18.74:0,19,348	0/0:19,1:20:19.81:0,20,229	0/0:36,0:36:89.97:0,90,781	1/1:4,22:26:51.14:564,51,0	1/1:3,12:15:30.08:332,30,0	1/1:6,24:30:66.16:720,66,0	0/0:22,0:22:50.97:0,51,440	1/1:4,31:35:70.17:984,70,0	1/1:1,16:17:38.94:400,39,0	1/1:1,20:21:60.16:664,60,0	0/0:23,0:23:59.92:0,60,505	1/1:6,25:31:66.18:727,66,0	0/0:24,0:24:59.95:0,60,514	1/1:2,15:17:39.11:431,39,0	1/1:1,16:17:22.07:472,22,0	1/1:1,15:16:42.11:465,42,0	1/1:3,21:24:63.16:688,63,0	1/1:3,30:33:81.15:870,81,0	1/1:0,10:10:24.06:266,24,0	1/1:3,22:25:17.03:631,17,0	1/1:4,26:31:51.99:785,52,0	1/1:4,20:24:60.16:664,60,0	0/0:26,0:26:71.91:0,72,611	0/0:24,1:25:38.80:0,39,566	0/0:27,0:27:62.94:0,63,543	0/0:20,0:20:56.98:0,57,494
chr10	19309889	.	TAAACAAAC	T	12790.26	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=15.819;DP=701;FS=0.365;HRun=0;HaplotypeScore=186.0449;InbreedingCoeff=0.9565;MQ=53.03;MQ0=4;MQRankSum=-15.873;QD=33.93;ReadPosRankSum=-0.442;VQSLOD=4.4213;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,99,3953	0/0:9,0:9:6.02:0,6,226	0/0:24,0:16:12.04:0,12,486	0/0:24,0:22:33.52:0,34,1207	0/0:33,0:34:72.23:0,72,2819	1/1:7,17:24:48.08:1119,48,0	1/1:8,14:22:30.10:771,30,0	0/0:25,0:25:48.16:0,48,1936	0/0:30,0:30:63.20:0,63,2465	1/1:9,16:25:51.15:1138,51,0	1/1:8,7:15:18.02:405,18,0	1/1:7,20:27:57.20:1464,57,0	0/0:40,0:40:87.30:0,87,3492	1/1:16,14:30:36.08:868,36,0	1/1:10,25:35:60.16:1447,60,0	1/1:14,19:33:57.20:1459,57,0	1/1:13,5:18:12.01:252,12,0	1/1:9,11:20:18.06:462,18,0	1/1:5,4:8:12.04:308,12,0	1/1:9,13:22:39.05:810,39,0	1/1:13,12:25:14.93:343,15,0	1/1:8,16:24:44.98:810,45,0	1/1:8,14:22:30.11:667,30,0	1/1:14,11:26:13.52:465,14,0	0/0:22,0:22:42.13:0,42,1652	0/0:31,0:31:63.22:0,63,2377	0/0:38,0:38:81.26:0,81,3188	0/0:6,0:6:9.03:0,9,317
chr10	19310686	.	A	AG	7121.48	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-11.537;DP=646;FS=0.702;HRun=2;HaplotypeScore=63.0906;InbreedingCoeff=0.9997;MQ=83.90;MQ0=0;MQRankSum=-2.705;QD=41.40;ReadPosRankSum=4.289;VQSLOD=4.6121;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,123,1565	1/1:1,10:11:30.10:447,30,0	0/0:21,0:21:55.77:0,56,746	0/0:19,0:19:52.98:0,53,662	1/1:0,29:29:81.27:1213,81,0	0/0:23,0:23:66.21:0,66,857	0/0:32,0:32:96.29:0,96,1216	0/0:25,0:25:69.22:0,69,882	0/0:14,0:14:42.14:0,42,545	0/0:22,0:22:60.19:0,60,779	0/0:23,0:23:66.21:0,66,851	0/0:23,0:23:69.22:0,69,895	1/1:1,26:27:75.08:1106,75,0	0/0:17,0:17:51.15:0,51,648	1/1:1,18:19:57.19:846,57,0	0/0:26,0:26:78.25:0,78,1013	0/0:42,0:42:99:0,117,1517	0/0:27,0:27:78.25:0,78,1013	0/0:18,0:18:51.17:0,51,661	0/0:17,0:17:45.13:0,45,570	0/0:26,0:26:75.23:0,75,958	0/0:17,0:17:45.15:0,45,582	0/0:16,0:16:45.15:0,45,582	0/0:22,0:22:60.16:0,60,749	1/1:0,27:27:72.24:1078,72,0	1/1:1,21:21:27.26:906,27,0	1/1:1,18:19:51.17:764,51,0	1/1:0,17:17:51.17:762,51,0
chr10	19311103	.	CCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT	C	3812.48	PASS	AB=0.692;AC=13;AF=0.232;AN=56;BaseQRankSum=5.147;DP=643;FS=4.018;HRun=0;HaplotypeScore=512.3826;InbreedingCoeff=0.7398;MQ=61.84;MQ0=20;MQRankSum=-1.883;QD=31.77;ReadPosRankSum=0.818;VQSLOD=-0.3135;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:51.18:0,51,2935	1/1:5,0:5:6.02:418,6,0	0/0:47,0:22:10.28:0,10,266	0/0:59,0:24:11.63:0,12,249	1/1:17,8:25:2.75:20,3,0	0/0:9,0:9:9.03:0,9,254	0/0:20,0:20:20.27:0,20,1139	0/0:38,0:35:31.34:0,31,815	0/0:16,0:14:18.06:0,18,623	0/0:28,0:28:39.13:0,39,2389	0/0:16,0:16:18.06:0,18,609	0/0:18,0:17:30.05:0,30,939	1/1:13,0:13:6.20:501,6,0	0/0:17,0:17:21.07:0,21,849	0/0:22,0:22:24.07:0,24,982	0/0:21,0:21:24.02:0,24,1099	0/0:20,0:19:25.90:0,26,1374	0/0:15,0:15:33.10:0,33,1521	0/0:28,0:28:36.09:0,36,1123	0/0:16,0:15:3.01:0,3,201	0/0:32,0:32:33.11:0,33,1591	0/0:24,0:23:24.08:0,24,1304	0/0:19,0:19:24.07:0,24,953	0/0:26,0:26:24.08:0,24,1182	1/1:23,0:23:18.06:912,18,0	0/1:15,12:27:67.09:804,0,67	1/1:13,0:13:14.96:580,15,0	1/1:14,0:13:9.03:578,9,0
chr10	19311126	.	CT	C	182.60	PASS	AB=1.000;AC=12;AF=0.222;AN=54;BaseQRankSum=8.240;DP=502;FS=1.610;HRun=1;HaplotypeScore=76.2010;InbreedingCoeff=0.6867;MQ=46.63;MQ0=49;MQRankSum=-4.062;QD=2.69;ReadPosRankSum=3.864;VQSLOD=-0.3572;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:63.03:0,63,797	1/1:0,2:2:5.34:22,5,0	0/1:23,0:5:17.91:18,0,102	0/0:39,1:7:9.66:0,10,181	./.	0/0:10,0:10:18.06:0,18,227	0/0:20,0:19:34.79:0,35,446	0/0:26,0:20:50.44:0,50,605	0/0:13,0:11:26.78:0,27,331	0/0:19,0:19:57.18:0,57,732	0/0:9,0:9:21.07:0,21,265	0/0:17,0:15:39.07:0,39,463	1/1:2,2:4:7.59:40,8,0	0/0:16,0:14:33.58:0,34,417	0/0:28,0:27:48.59:0,49,579	0/0:20,0:19:39.12:0,39,488	0/0:26,0:25:49.54:0,50,608	0/0:24,0:23:57.12:0,57,690	0/0:14,0:13:39.10:0,39,462	0/0:11,0:10:6.02:0,6,76	0/0:32,0:30:51.16:0,51,642	0/0:17,0:15:24.08:0,24,305	0/0:21,0:19:27.07:0,27,328	0/0:33,0:31:39.12:0,39,491	1/1:4,4:7:16:91,16,0	0/1:16,0:13:44.86:82,0,45	1/1:2,3:5:13.02:64,13,0	1/1:6,3:4:8.71:30,9,0
chr10	19311129	.	T	TG	162.60	PASS	AB=1.000;AC=11;AF=0.204;AN=54;BaseQRankSum=7.732;DP=464;FS=5.623;HRun=0;HaplotypeScore=77.0284;InbreedingCoeff=0.7377;MQ=46.44;MQ0=50;MQRankSum=-5.371;QD=3.70;ReadPosRankSum=3.413;VQSLOD=2.6093;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:63.21:0,63,864	1/1:0,2:2:5.83:33,6,0	0/0:18,0:3:1.95:0,2,77	0/0:34,0:4:8.97:0,9,90	./.	0/0:8,0:8:15.05:0,15,207	0/0:22,0:21:41.71:0,42,573	0/0:22,0:16:37.46:0,37,473	0/0:12,0:10:21.71:0,22,290	0/0:19,0:19:51.17:0,51,699	0/0:6,0:6:15.04:0,15,188	0/0:16,0:14:33.10:0,33,437	1/1:2,2:4:8.55:56,9,0	0/0:16,0:14:33.58:0,34,449	0/0:27,0:26:45.61:0,46,605	0/0:20,0:19:39.11:0,39,510	0/0:26,0:25:49.55:0,50,666	0/0:21,0:20:51.15:0,51,676	0/0:11,0:10:27.08:0,27,361	0/0:9,0:8:6:0,6,69	0/0:33,0:31:43.69:0,44,638	0/0:13,0:12:24.08:0,24,332	0/0:21,0:19:24.07:0,24,313	0/0:29,0:27:33.11:0,33,453	1/1:4,4:7:17.38:124,17,0	0/1:16,0:13:20.46:20,0,60	1/1:2,3:5:8.43:40,8,0	1/1:5,3:4:10.37:47,10,0
chr10	19311289	.	A	ATCTGTCTCTCTGTCTCTG	26015.77	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-7.844;DP=828;FS=15.446;HRun=0;HaplotypeScore=234.5160;InbreedingCoeff=0.7588;MQ=64.70;MQ0=5;MQRankSum=-8.722;QD=42.37;ReadPosRankSum=1.662;VQSLOD=2.4366;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,108,4153	1/1:1,6:14:9.97:702,10,0	0/0:49,0:31:26.32:0,26,1151	0/0:59,0:40:40:0,40,1383	1/1:0,19:29:15.05:1061,15,0	1/1:0,8:12:3.01:177,3,0	1/1:23,0:23:35.28:744,35,0	0/0:33,0:33:96.20:0,96,2256	0/0:32,0:32:90.15:0,90,3248	1/1:4,28:46:89.91:4025,90,0	1/1:1,13:23:15.05:1278,15,0	1/1:2,18:29:14.15:1074,14,0	1/1:3,22:39:27.98:2331,28,0	1/1:0,11:28:8.51:787,9,0	1/1:3,16:34:12.04:965,12,0	1/1:1,16:29:26.87:2365,27,0	1/1:4,13:30:12.04:892,12,0	1/1:1,6:13:9.03:514,9,0	1/1:21,0:21:61.06:1417,61,0	1/1:2,11:21:3.01:263,3,0	1/1:33,0:33:41.73:507,42,0	1/1:1,17:36:6.49:454,6,0	1/1:0,10:26:7.43:527,7,0	1/1:1,8:22:3.01:262,3,0	1/1:2,15:29:6.02:249,6,0	1/1:3,20:35:89.84:3673,90,0	1/1:2,19:35:14.64:1225,15,0	1/1:0,5:7:6.02:525,6,0
chr10	19311730	.	A	AC	629.99	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-4.835;DP=482;FS=11.602;HRun=7;HaplotypeScore=51.6605;InbreedingCoeff=0.9365;MQ=93.16;MQ0=0;MQRankSum=-3.671;QD=23.33;ReadPosRankSum=2.378;VQSLOD=2.9670;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:36.05:0,36,346	0/0:12,0:12:27.04:0,27,261	0/0:26,0:26:55.55:0,56,577	0/0:21,0:21:40.55:0,41,374	0/0:15,0:15:45.03:0,45,425	0/0:15,0:15:36.05:0,36,347	0/0:12,0:12:24.03:0,24,230	0/0:22,0:22:48.04:0,48,451	0/0:17,0:17:48.07:0,48,463	0/0:13,0:13:33.05:0,33,319	0/0:9,0:9:24.04:0,24,232	0/0:32,0:32:90.14:0,90,868	0/0:19,0:19:48.06:0,48,457	0/0:14,0:14:39.01:0,39,356	1/1:3,24:27:60.18:725,60,0	0/0:21,0:21:57.07:0,57,543	0/0:20,0:20:48.07:0,48,463	0/0:10,0:10:27.04:0,27,260	0/0:13,0:13:27.04:0,27,261	0/0:11,0:11:30.04:0,30,284	0/0:26,0:26:63.08:0,63,602	0/0:19,0:19:47.45:0,47,428	0/0:12,0:12:30.01:0,30,278	0/0:21,0:21:54.08:0,54,520	0/0:15,0:15:30.04:0,30,290	0/0:23,0:23:51.06:0,51,491	0/0:15,0:15:36.05:0,36,348	0/0:5,0:5:9.01:0,9,87
chr10	19315162	.	CCCTGGG	C	10924.93	PASS	AB=0.556;AC=29;AF=0.518;AN=56;BaseQRankSum=1.175;DP=599;FS=17.875;HRun=0;HaplotypeScore=149.4104;InbreedingCoeff=0.9195;MQ=70.84;MQ0=0;MQRankSum=-16.048;QD=37.16;ReadPosRankSum=1.097;VQSLOD=3.7907;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,129,4178	0/0:17,0:17:42.14:0,42,1103	0/0:15,0:15:38.96:0,39,1054	0/0:13,0:13:21.04:0,21,480	0/0:20,0:20:57.20:0,57,1528	1/1:3,19:22:54.19:1231,54,0	1/1:6,12:18:24.08:544,24,0	0/0:24,0:24:69.24:0,69,2340	0/0:26,0:26:72.25:0,72,2407	1/1:5,18:23:57.18:1257,57,0	1/1:0,11:11:18.06:408,18,0	1/1:2,12:14:30.10:685,30,0	0/0:30,0:30:78.23:0,78,2097	1/1:4,13:16:36.12:820,36,0	0/0:29,0:29:77.70:0,78,2500	0/1:4,16:20:68.49:717,0,68	1/1:6,15:21:24.08:548,24,0	1/1:3,16:20:42.14:959,42,0	1/1:4,9:13:27.09:552,27,0	1/1:3,13:16:30.10:680,30,0	1/1:8,19:27:15.52:343,16,0	1/1:4,21:25:39.13:889,39,0	1/1:1,19:20:36.03:821,36,0	1/1:7,20:27:24.04:472,24,0	0/0:32,0:32:87.29:0,87,2337	0/0:26,0:26:75.20:0,75,1943	0/0:20,0:20:51.16:0,51,1383	0/0:4,0:4:12.04:0,12,324
chr10	19315280	.	C	CGTGT	6541.20	PASS	AB=0.739;AC=46;AF=0.821;AN=56;BaseQRankSum=1.523;DP=611;FS=14.823;HRun=0;HaplotypeScore=164.4826;InbreedingCoeff=0.4151;MQ=58.96;MQ0=12;MQRankSum=-2.177;QD=12.30;ReadPosRankSum=3.460;VQSLOD=3.4561;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:34:10.98:49,11,0	1/1:4,0:6:8.98:123,9,0	1/1:31,0:11:0.47:1,0,0	0/0:28,0:17:10.99:0,11,50	0/0:17,1:17:0:0,0,0	1/1:10,8:18:11.78:229,12,0	1/1:18,9:27:17.59:301,18,0	0/0:33,0:31:33.19:0,33,525	0/1:10,0:23:65.83:80,0,66	1/1:7,8:17:29.74:515,30,0	0/1:4,6:10:0:0,0,0	1/1:11,2:14:20.47:353,20,0	1/1:20,0:21:18.03:258,18,0	1/1:7,6:14:11.93:275,12,0	1/1:10,0:15:8.62:164,9,0	1/1:17,12:34:27.18:479,27,0	1/1:9,11:21:23.87:503,24,0	0/1:10,7:18:29.32:254,0,29	1/1:17,2:17:14.94:268,15,0	1/1:5,13:20:26.83:590,27,0	1/1:23,8:30:15.05:334,15,0	1/1:8,10:21:17.80:373,18,0	1/1:10,4:14:4.65:78,5,0	1/1:19,8:28:19.99:383,20,0	0/1:24,0:24:18.90:68,0,19	1/1:32,0:28:47.84:551,48,0	1/1:25,0:25:22.73:207,23,0	1/1:5,0:8:6.02:104,6,0
chr10	19315335	.	A	AAGAGAG	2424.15	PASS	AB=0.867;AC=45;AF=0.865;AN=52;BaseQRankSum=-0.207;DP=486;FS=12.138;HRun=0;HaplotypeScore=147.4459;InbreedingCoeff=0.1596;MQ=45.42;MQ0=15;MQRankSum=-1.429;QD=5.42;ReadPosRankSum=0.145;VQSLOD=2.1192;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:27:5.97:49,6,0	0/1:5,0:5:0:0,0,0	./.	./.	0/1:22,0:22:4.06:79,0,4	1/1:14,0:13:15.01:198,15,0	1/1:19,0:19:3.55:119,4,0	1/1:27,0:26:10.30:77,10,0	1/1:16,0:16:2.89:22,3,0	0/1:19,0:18:30.37:137,0,30	0/1:6,0:10:3.61:4,0,35	1/1:13,0:14:14.57:147,15,0	1/1:12,0:11:9.41:65,9,0	1/1:12,0:12:8.86:101,9,0	0/0:14,0:16:9.03:0,9,127	1/1:18,0:18:11.97:127,12,0	1/1:11,0:11:8.91:131,9,0	1/1:14,0:13:14.99:149,15,0	1/1:19,0:13:12:152,12,0	1/1:17,0:16:3:25,3,0	1/1:17,0:15:2.95:52,3,0	1/1:15,0:16:10.87:164,11,0	1/1:20,0:21:23.91:272,24,0	0/1:14,14:34:19:28,0,19	1/1:18,0:18:3.01:47,3,0	1/1:20,0:19:7.42:157,7,0	1/1:30,0:30:17.76:148,18,0	1/1:9,0:8:14.73:98,15,0
chr10	19315353	.	G	GAGAA	2524.15	PASS	AB=0.946;AC=17;AF=0.304;AN=56;BaseQRankSum=1.306;DP=510;FS=14.659;HRun=0;HaplotypeScore=118.6220;InbreedingCoeff=0.2445;MQ=47.45;MQ0=17;MQRankSum=1.095;QD=11.42;ReadPosRankSum=3.431;VQSLOD=2.1910;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:27:56.47:0,56,410	1/1:8,0:8:14.33:101,14,0	0/0:11,0:7:16.25:0,16,168	0/0:13,0:7:8.29:0,8,106	1/1:4,15:21:15.01:520,15,0	0/0:14,0:13:3.09:0,3,26	0/1:17,0:18:13.02:13,0,79	0/0:29,0:26:57.50:0,58,374	0/0:18,0:17:34.33:0,34,255	0/0:23,0:22:47.87:0,48,347	0/0:14,0:14:24.44:0,24,237	0/1:16,0:16:53.38:53,0,56	0/1:3,10:12:1.65:230,0,2	0/1:12,0:11:10.07:78,0,10	0/0:12,0:12:14.36:0,14,152	0/1:19,0:19:15.80:16,0,127	0/1:10,0:9:18.21:18,0,18	0/0:15,0:14:7.16:0,7,47	0/0:15,0:12:22.14:0,22,176	0/0:17,0:15:9.29:0,9,70	0/0:17,0:16:20.68:0,21,157	0/1:15,0:13:5.25:5,0,18	0/0:24,0:24:16.53:0,17,122	0/0:39,0:37:3.16:0,3,120	0/1:21,0:21:48.88:99,0,49	1/1:4,18:24:42.34:737,42,0	1/1:8,21:30:6.79:543,7,0	0/1:13,0:12:5.25:283,0,5
chr10	19316722	.	A	AGTG	678.84	PASS	AB=0.818;AC=6;AF=0.111;AN=54;BaseQRankSum=6.456;DP=742;FS=6.993;HRun=0;HaplotypeScore=156.0858;InbreedingCoeff=-0.1287;MQ=51.20;MQ0=35;MQRankSum=-6.066;QD=4.22;ReadPosRankSum=-1.825;VQSLOD=2.0150;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:34:81.21:0,81,1367	0/1:5,2:7:10.73:11,0,96	0/0:39,0:11:21.90:0,22,302	0/1:65,0:25:7.91:8,0,350	0/0:7,6:12:3.01:0,3,53	0/0:17,0:16:32.90:0,33,549	0/0:41,0:36:95.23:0,95,1478	0/0:15,0:11:30.10:0,30,529	0/0:30,0:26:63.63:0,64,1076	0/0:19,0:15:42.13:0,42,679	0/0:8,0:8:18.06:0,18,318	0/0:33,0:28:48.16:0,48,832	0/1:20,11:29:99:417,0,415	0/0:21,0:19:37.87:0,38,783	0/0:38,0:34:78.51:0,79,1214	0/0:29,0:26:57.08:0,57,910	0/0:49,0:45:99:0,117,1842	0/0:25,0:22:45.10:0,45,705	0/0:27,0:15:42.06:0,42,602	0/0:16,0:13:29.84:0,30,488	0/0:51,0:44:66.13:0,66,1089	0/0:14,0:11:18.02:0,18,317	0/0:12,0:11:27.08:0,27,448	0/0:42,0:38:52.77:0,53,994	0/1:9,5:15:99:166,0,203	0/1:18,5:22:99:150,0,688	0/1:15,2:18:45.97:46,0,337	./.
chr10	19316726	.	GCA	G	134.62	PASS	AB=0.773;AC=2;AF=0.037;AN=54;BaseQRankSum=7.172;DP=724;FS=6.063;HRun=0;HaplotypeScore=139.2988;InbreedingCoeff=-0.0591;MQ=47.95;MQ0=44;MQRankSum=-4.953;QD=2.59;ReadPosRankSum=-3.124;VQSLOD=1.4500;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:33:75.21:0,75,1510	0/0:6,2:7:6.02:0,6,122	0/0:36,0:8:14.98:0,15,187	0/0:59,1:19:10.38:0,10,288	0/0:5,6:10:3.01:0,3,61	0/0:16,0:15:33.09:0,33,593	0/0:39,0:34:77.34:0,77,1503	0/0:18,0:13:39.13:0,39,781	0/0:30,0:26:63.18:0,63,1234	0/0:17,0:13:39.13:0,39,787	0/0:9,0:9:18.06:0,18,363	0/0:34,0:28:56.49:0,56,1083	0/1:17,11:26:99:165,0,508	0/0:21,0:19:46.39:0,46,858	0/0:39,0:35:51.93:0,52,1273	0/0:28,0:24:54.02:0,54,1114	0/0:48,0:44:87.92:0,88,1968	0/0:23,0:20:45.03:0,45,729	0/0:25,0:12:30.09:0,30,560	0/0:14,0:12:27.55:0,28,508	0/0:51,0:43:63.08:0,63,1143	0/0:14,0:11:23.66:0,24,414	0/0:12,0:11:24.07:0,24,487	0/0:45,0:39:51.26:0,51,993	0/0:9,6:15:3.04:0,3,285	0/1:19,5:22:57.42:57,0,823	0/0:11,3:14:22.20:0,22,428	./.
chr10	19316773	.	CAG	C	1862.49	PASS	AB=0.820;AC=18;AF=0.360;AN=50;BaseQRankSum=-1.122;DP=580;FS=8.358;HRun=0;HaplotypeScore=95.4819;InbreedingCoeff=-0.0640;MQ=29.31;MQ0=158;MQRankSum=-0.811;QD=4.98;ReadPosRankSum=-1.096;VQSLOD=2.0127;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:24:48.47:0,48,509	0/0:8,0:5:12.04:0,12,216	./.	0/0:20,1:2:3.01:0,3,40	0/0:8,0:2:2.74:0,3,12	0/1:9,4:8:51.71:52,0,128	0/1:26,4:14:33.69:108,0,34	0/0:12,0:6:12.04:0,12,216	0/0:25,0:14:5.29:0,5,97	0/1:19,5:10:99:239,0,128	1/1:4,2:5:2.93:41,3,0	1/1:20,9:14:28.32:352,28,0	0/0:15,0:10:11.65:0,12,187	1/1:5,3:4:3.01:42,3,0	1/1:10,10:12:14.16:282,14,0	0/1:16,11:16:78.89:301,0,79	0/1:33,14:32:99:326,0,329	0/1:24,2:18:73.40:73,0,196	0/1:21,3:6:8.88:9,0,142	./.	0/1:45,6:30:30.59:31,0,38	0/1:11,6:10:27.20:27,0,119	0/0:9,1:7:3.01:0,3,41	0/1:36,13:31:72.52:133,0,73	0/0:18,0:8:5.94:0,6,108	0/0:18,0:9:12.04:0,12,216	0/0:6,0:4:2.94:0,3,42	./.
chr10	19316781	.	CAG	C	1485.61	PASS	AB=0.815;AC=16;AF=0.333;AN=48;BaseQRankSum=0.122;DP=534;FS=16.570;HRun=0;HaplotypeScore=89.6663;InbreedingCoeff=0.1544;MQ=26.67;MQ0=153;MQRankSum=1.313;QD=4.75;ReadPosRankSum=4.223;VQSLOD=1.3309;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:26,14:23:57.50:456,0,57	0/0:7,0:5:12.03:0,12,181	./.	./.	0/0:7,0:1:3.01:0,3,32	0/0:11,1:5:6.02:0,6,91	0/0:25,1:10:4.66:0,5,38	0/0:13,0:5:11.90:0,12,132	1/1:20,9:12:16.77:223,17,0	0/1:15,3:8:59.27:59,0,103	0/0:1,2:3:0:0,0,0	1/1:18,9:13:17.89:240,18,0	0/0:12,0:7:9.03:0,9,148	1/1:3,3:2:3.01:42,3,0	1/1:11,8:11:15.05:207,15,0	0/1:17,7:15:28.28:193,0,28	0/1:40,8:31:86.12:86,0,184	0/1:26,3:17:80.77:81,0,121	0/0:23,0:5:11.77:0,12,72	./.	0/0:45,5:29:4.21:0,4,22	0/1:11,6:8:0.53:1,0,59	0/1:5,1:4:0:0,0,0	0/1:38,11:30:43.42:43,0,86	0/0:15,0:4:6.02:0,6,105	0/0:17,0:7:14.97:0,15,201	0/0:5,0:3:3.01:0,3,53	./.
chr10	19316797	.	GAGGC	G	150.34	PASS	AB=0.966;AC=7;AF=0.175;AN=40;BaseQRankSum=3.748;DP=387;FS=4.423;HRun=0;HaplotypeScore=83.9173;InbreedingCoeff=0.1996;MQ=21.78;MQ0=109;MQRankSum=-1.660;QD=1.04;ReadPosRankSum=-1.489;VQSLOD=0.9405;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:21:38.54:0,39,472	0/0:6,0:3:0:0,0,0	./.	./.	./.	0/0:3,2:1:3:0,3,29	0/0:21,0:7:8.95:0,9,108	0/0:8,0:3:9.03:0,9,125	0/0:30,0:13:18.44:0,18,276	0/0:15,0:6:15.04:0,15,200	./.	0/0:22,1:10:12.93:0,13,170	0/0:8,2:5:3.90:0,4,80	0/0:2,1:1:3.01:0,3,36	0/0:14,0:8:9.03:0,9,120	0/1:19,1:10:14.90:15,0,102	0/1:29,1:19:64.75:65,0,188	0/0:28,1:16:18.78:0,19,212	0/0:16,0:5:12.04:0,12,160	./.	0/1:42,1:27:20.69:21,0,37	0/0:11,0:6:6.02:0,6,83	0/0:2,0:2:3.01:0,3,42	1/1:35,3:22:2.20:68,2,0	./.	1/1:11,3:7:8.65:94,9,0	./.	./.
chr10	19316799	.	GGC	G	226.87	PASS	AB=0.924;AC=7;AF=0.175;AN=40;BaseQRankSum=4.744;DP=368;FS=6.939;HRun=0;HaplotypeScore=77.5389;InbreedingCoeff=-0.0114;MQ=21.04;MQ0=108;MQRankSum=0.256;QD=1.36;ReadPosRankSum=-0.304;VQSLOD=0.1351;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:19:37.67:0,38,585	./.	./.	./.	./.	0/0:4,0:1:3.01:0,3,35	0/0:21,0:7:8.64:0,9,163	0/0:8,0:3:9.03:0,9,158	0/0:30,0:13:19.38:0,19,296	0/0:15,0:6:15.05:0,15,230	0/0:2,0:2:0:0,0,0	0/0:21,0:9:12.51:0,13,217	0/0:9,0:4:3.01:0,3,60	0/0:4,0:1:3.01:0,3,37	0/0:14,0:8:9.03:0,9,146	0/1:16,1:10:36.74:37,0,113	0/1:23,5:17:99:158,0,251	0/1:28,1:16:27.62:28,0,248	0/0:14,0:5:12.04:0,12,190	./.	0/1:36,7:26:6.28:6,0,63	0/0:10,0:6:6.02:0,6,108	0/0:2,0:2:3.01:0,3,55	1/1:32,6:22:4.59:99,5,0	./.	0/1:12,0:5:8.46:8,0,23	./.	./.
chr10	19316809	.	GAGGC	G	226.17	PASS	AB=0.947;AC=10;AF=0.278;AN=36;BaseQRankSum=4.064;DP=344;FS=6.102;HRun=0;HaplotypeScore=74.7520;InbreedingCoeff=0.1531;MQ=20.01;MQ0=107;MQRankSum=-1.107;QD=1.30;ReadPosRankSum=0.083;VQSLOD=0.8629;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:16:30.71:0,31,364	./.	./.	./.	./.	./.	0/0:18,1:8:8.97:0,9,126	0/0:6,0:3:9.03:0,9,128	0/0:29,0:13:10.10:0,10,278	0/1:13,2:6:38.22:38,0,126	./.	0/0:21,1:9:10.85:0,11,119	0/0:7,1:4:3.90:0,4,81	./.	0/0:10,0:4:6.02:0,6,84	1/1:14,1:7:2.84:28,3,0	0/1:27,1:16:99:117,0,143	0/1:29,1:15:5.26:5,0,206	0/0:9,0:2:3.01:0,3,41	0/0:2,1:1:0:0,0,0	0/1:37,1:24:13.75:22,0,14	0/0:7,0:4:6.02:0,6,84	0/0:1,0:1:3.01:0,3,39	1/1:38,2:22:6.99:98,7,0	./.	1/1:8,0:5:2.37:32,2,0	./.	./.
chr10	19316813	.	C	CAG	404.70	PASS	AB=0.970;AC=11;AF=0.306;AN=36;BaseQRankSum=4.036;DP=335;FS=2.148;HRun=0;HaplotypeScore=73.7593;InbreedingCoeff=0.0984;MQ=20.30;MQ0=104;MQRankSum=0.212;QD=1.94;ReadPosRankSum=-0.736;VQSLOD=1.4305;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:14:23.96:0,24,269	./.	./.	./.	./.	./.	0/0:21,0:10:8.70:0,9,126	0/0:8,0:3:9.03:0,9,126	0/1:31,0:13:1.65:2,0,185	0/1:11,0:5:37.49:37,0,121	0/0:2,0:2:0:0,0,0	0/0:22,0:9:5.51:0,6,42	0/0:7,0:3:1.73:0,2,40	./.	0/1:10,0:5:36.83:37,0,62	1/1:16,1:9:3.01:52,3,0	0/1:26,4:17:87.11:205,0,87	0/1:31,1:15:35.63:36,0,183	./.	0/0:3,0:1:0:0,0,0	1/1:30,7:24:2.87:16,3,0	0/0:5,0:3:6.02:0,6,84	./.	1/1:35,6:22:7.89:131,8,0	./.	0/0:5,0:3:2.61:0,3,7	0/0:4,0:2:0:0,0,0	./.
chr10	19316815	.	GAGGC	G	248.84	PASS	AB=0.979;AC=9;AF=0.281;AN=32;BaseQRankSum=4.528;DP=334;FS=3.653;HRun=0;HaplotypeScore=75.4376;InbreedingCoeff=0.2963;MQ=19.97;MQ0=107;MQRankSum=-1.287;QD=1.54;ReadPosRankSum=0.036;VQSLOD=1.5270;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:13:22.98:0,23,264	./.	./.	./.	./.	./.	0/0:21,0:10:11.98:0,12,164	0/0:8,0:3:9.03:0,9,129	0/0:30,1:13:2.40:0,2,283	0/0:10,0:5:15.01:0,15,179	./.	0/0:22,0:8:8.37:0,8,66	0/0:7,0:3:3.90:0,4,81	./.	0/0:10,0:5:9.03:0,9,105	1/1:17,1:9:3.01:52,3,0	0/1:28,2:17:99:131,0,114	0/1:32,0:15:13.69:14,0,213	./.	0/0:3,0:1:0:0,0,0	1/1:31,4:23:4.07:30,4,0	0/0:5,0:3:6.02:0,6,84	./.	1/1:40,2:23:7.54:130,8,0	./.	0/1:5,0:3:0.33:0,0,11	./.	./.
chr10	19316819	.	C	CAG	316.74	PASS	AB=0.984;AC=10;AF=0.294;AN=34;BaseQRankSum=5.338;DP=328;FS=5.990;HRun=0;HaplotypeScore=77.3704;InbreedingCoeff=0.1435;MQ=20.44;MQ0=102;MQRankSum=-0.324;QD=1.66;ReadPosRankSum=-0.504;VQSLOD=0.8305;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:11:19.79:0,20,226	./.	./.	./.	./.	./.	0/0:17,0:11:12.51:0,13,169	0/0:9,0:3:9.03:0,9,122	0/1:30,0:13:9.36:9,0,185	0/0:9,0:4:0.83:0,1,103	0/0:2,0:2:0:0,0,0	0/0:21,0:9:5.67:0,6,29	0/0:8,0:4:1.73:0,2,40	./.	0/0:10,0:6:3.01:0,3,33	1/1:20,0:10:2.36:50,2,0	0/1:26,1:15:81.46:171,0,81	0/1:32,1:15:35.64:36,0,169	./.	./.	1/1:33,2:21:4.12:18,4,0	0/0:5,0:3:6.02:0,6,84	./.	1/1:40,2:21:8.09:131,8,0	./.	0/1:4,0:3:5.92:13,0,6	0/0:4,0:2:0:0,0,0	./.
chr10	19316821	.	GAGGC	G	198.84	PASS	AB=0.989;AC=5;AF=0.139;AN=36;BaseQRankSum=5.130;DP=332;FS=0.000;HRun=0;HaplotypeScore=77.0906;InbreedingCoeff=0.0554;MQ=21.77;MQ0=103;MQRankSum=-1.622;QD=1.59;ReadPosRankSum=1.692;VQSLOD=0.7961;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:11:19.14:0,19,229	./.	./.	./.	./.	0/0:7,0:2:3.01:0,3,42	0/0:16,1:11:13.29:0,13,170	0/0:9,0:3:9.03:0,9,124	0/0:29,0:13:6.29:0,6,317	0/0:9,0:4:5.26:0,5,112	./.	0/0:21,0:9:12.03:0,12,155	0/0:7,0:3:6.91:0,7,116	0/0:12,0:6:3.01:0,3,42	0/0:11,0:7:9.03:0,9,129	0/1:20,0:10:36.02:44,0,36	0/1:27,1:16:99:113,0,167	0/1:34,0:15:9.96:10,0,234	./.	0/0:4,0:2:3.01:0,3,42	0/0:35,1:21:1.25:0,1,39	0/0:5,0:3:6.02:0,6,84	./.	1/1:41,2:21:10.38:135,10,0	./.	0/0:3,0:2:2.44:0,2,6	./.	./.
chr10	19316827	.	GAGGC	G	114.61	PASS	AB=0.913;AC=6;AF=0.150;AN=40;BaseQRankSum=5.036;DP=335;FS=0.000;HRun=0;HaplotypeScore=69.8617;InbreedingCoeff=-0.0587;MQ=21.99;MQ0=111;MQRankSum=-1.525;QD=1.11;ReadPosRankSum=0.195;VQSLOD=1.4032;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:9:14.41:0,14,179	./.	./.	./.	./.	0/0:8,0:3:3.01:0,3,42	0/0:14,0:9:16.87:0,17,206	0/0:7,0:2:6.02:0,6,77	0/0:30,0:13:6.46:0,6,327	0/1:8,1:3:37.60:38,0,67	0/0:2,0:2:0.47:0,0,1	0/0:21,0:7:12.04:0,12,172	0/0:6,0:2:6.02:0,6,120	0/0:13,0:6:3.01:0,3,42	0/0:9,0:6:15.05:0,15,206	0/1:19,2:11:36.76:37,0,72	0/1:27,3:17:69.48:69,0,276	0/0:33,0:15:20.96:0,21,267	./.	0/0:4,0:2:3.01:0,3,42	0/0:38,5:24:7.10:0,7,120	0/0:5,0:3:6.02:0,6,82	./.	0/1:37,3:19:68.43:68,0,79	./.	1/1:3,0:1:0.89:2,1,0	0/0:4,0:2:3.01:0,3,30	./.
chr10	19316839	.	GAGGC	G	96.17	PASS	AB=0.966;AC=11;AF=0.239;AN=46;BaseQRankSum=3.994;DP=374;FS=5.880;HRun=0;HaplotypeScore=64.8473;InbreedingCoeff=0.0510;MQ=23.95;MQ0=122;MQRankSum=-2.677;QD=0.58;ReadPosRankSum=-1.788;VQSLOD=0.6275;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:8:15.08:0,15,144	./.	./.	./.	./.	0/0:8,0:3:3.01:0,3,42	0/0:11,0:7:8.39:0,8,92	0/0:5,0:1:3.01:0,3,42	0/1:30,0:13:27.66:28,0,286	0/1:9,1:4:71.97:81,0,72	0/0:2,0:2:1.55:0,2,4	0/0:24,0:9:23.44:0,23,304	0/0:8,0:2:6.02:0,6,120	0/0:15,0:8:12.04:0,12,168	0/0:12,0:9:21.07:0,21,296	0/0:22,1:12:13.22:0,13,149	0/1:32,0:18:3.75:4,0,341	0/1:33,2:20:31.66:32,0,316	0/0:10,0:2:3.01:0,3,31	0/0:4,0:3:3.01:0,3,42	0/0:51,1:28:13.11:0,13,207	0/0:2,1:3:3.01:0,3,42	./.	0/1:42,1:21:28.81:29,0,175	1/1:4,0:1:2.37:8,2,0	0/0:5,0:2:3.41:0,3,19	1/1:5,0:2:2.97:20,3,0	1/1:6,0:3:0.37:15,0,0
chr10	19316853	.	GGC	G	99.54	PASS	AB=1.000;AC=4;AF=0.087;AN=46;BaseQRankSum=4.385;DP=435;FS=1.695;HRun=0;HaplotypeScore=61.3382;InbreedingCoeff=0.1532;MQ=24.11;MQ0=165;MQRankSum=-3.155;QD=1.56;ReadPosRankSum=-1.664;VQSLOD=1.4998;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:4:6.90:0,7,61	./.	./.	./.	./.	0/0:10,0:3:3.01:0,3,58	0/0:14,0:8:7.58:0,8,120	0/0:5,0:1:3.01:0,3,58	0/0:28,0:10:17.59:0,18,351	0/0:10,0:4:12.02:0,12,195	0/0:4,0:2:2.29:0,2,6	0/0:30,0:14:34.67:0,35,618	0/0:7,1:3:6.02:0,6,119	0/0:20,0:10:18.06:0,18,316	0/0:17,0:13:26.34:0,26,476	0/0:23,0:11:2.89:0,3,157	0/0:33,0:19:38.09:0,38,571	0/0:34,0:19:23.83:0,24,507	0/0:17,0:4:6.02:0,6,115	0/0:6,0:5:6.02:0,6,114	0/0:57,0:26:22.15:0,22,463	0/0:5,0:1:3.01:0,3,58	./.	0/1:48,0:24:24.99:25,0,423	0/0:9,1:4:2.93:0,3,36	1/1:7,3:4:10.28:151,10,0	0/0:8,1:3:2.97:0,3,20	0/1:6,0:3:12.11:27,0,12
chr10	19316859	.	GGC	G	175.13	PASS	AB=0.900;AC=4;AF=0.080;AN=50;BaseQRankSum=4.065;DP=507;FS=1.636;HRun=0;HaplotypeScore=66.0331;InbreedingCoeff=0.2494;MQ=23.32;MQ0=206;MQRankSum=-2.401;QD=3.24;ReadPosRankSum=-0.764;VQSLOD=1.9519;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:4:5.46:0,5,20	./.	./.	./.	0/0:9,0:6:0.09:0,0,0	0/0:10,0:3:3.01:0,3,58	0/0:17,0:9:9.92:0,10,155	0/0:10,0:2:6.02:0,6,116	0/0:35,0:11:20.82:0,21,340	0/0:10,0:5:15.05:0,15,281	0/0:6,0:3:1.72:0,2,3	0/0:32,1:15:33.99:0,34,602	0/0:12,0:6:6.02:0,6,119	0/0:22,2:11:18.06:0,18,348	0/0:18,0:14:30.63:0,31,534	0/0:22,1:11:11.93:0,12,171	0/1:30,3:20:99:99,0,554	0/0:34,0:20:29.46:0,29,520	0/0:21,0:4:6.02:0,6,117	0/0:7,0:6:12.03:0,12,178	0/0:64,2:29:26.92:0,27,503	0/0:6,0:1:3.01:0,3,58	0/0:5,0:4:0:0,0,0	0/0:53,0:28:12.22:0,12,422	0/0:11,1:4:2.93:0,3,58	0/1:13,2:5:34.02:34,0,75	0/0:10,0:3:3.01:0,3,32	1/1:3,3:3:9.03:145,9,0
chr10	19316891	.	CAGAG	C	1092.09	PASS	AB=0.927;AC=14;AF=0.280;AN=50;BaseQRankSum=5.443;DP=615;FS=2.652;HRun=0;HaplotypeScore=92.0523;InbreedingCoeff=0.1810;MQ=24.19;MQ0=228;MQRankSum=-4.050;QD=4.44;ReadPosRankSum=-0.957;VQSLOD=1.9369;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:10:5.44:0,5,116	./.	./.	./.	1/1:10,6:9:5.52:47,6,0	0/0:9,0:7:9.02:0,9,141	0/0:29,0:13:14.45:0,14,253	0/0:20,0:5:12.03:0,12,197	0/0:23,0:7:11.96:0,12,214	0/0:15,0:9:20.09:0,20,309	0/0:8,0:5:0:0,0,0	0/0:38,0:24:15.64:0,16,874	0/1:16,3:13:51.03:161,0,51	0/0:30,0:18:19.76:0,20,396	0/1:30,3:24:58.16:58,0,788	0/1:32,0:17:0:0,0,398	0/0:40,0:27:60.56:0,61,942	0/0:25,0:13:17.85:0,18,278	0/1:25,0:6:17.74:18,0,101	0/0:10,0:8:12:0,12,195	0/0:61,0:28:33.10:0,33,614	0/0:12,0:4:3.01:0,3,59	0/1:9,0:9:0:0,0,0	0/1:47,0:24:5.23:5,0,323	0/1:19,3:9:46.25:46,0,46	0/1:14,6:11:14.21:494,0,14	1/1:11,7:8:21.07:393,21,0	1/1:3,0:1:2.37:8,2,0
chr10	19316897	.	G	GGCAA	1200.07	PASS	AB=0.910;AC=11;AF=0.212;AN=52;BaseQRankSum=5.378;DP=697;FS=0.000;HRun=0;HaplotypeScore=103.9817;InbreedingCoeff=0.2936;MQ=23.63;MQ0=250;MQRankSum=-4.549;QD=6.94;ReadPosRankSum=-1.630;VQSLOD=1.8229;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:11:5.96:0,6,120	0/1:11,0:3:0:0,0,0	./.	./.	1/1:22,0:11:10.86:91,11,0	0/0:9,0:7:9.03:0,9,156	0/0:33,0:14:15.09:0,15,294	0/0:20,0:4:12.04:0,12,232	0/0:28,0:9:15:0,15,266	0/0:18,0:9:24.02:0,24,402	0/0:9,0:5:0:0,0,0	0/0:41,0:26:44.65:0,45,998	0/1:11,8:13:50.75:148,0,51	0/0:34,0:19:10.42:0,10,418	0/1:39,0:27:41.68:42,0,840	0/0:38,0:17:20.67:0,21,448	0/0:45,0:26:62.32:0,62,1096	0/0:30,0:14:18.06:0,18,330	0/0:27,0:6:2.26:0,2,112	0/0:12,0:9:12.44:0,12,216	0/0:64,0:31:32.80:0,33,680	0/0:16,0:7:2.13:0,2,61	1/1:9,0:9:0.02:0,0,0	0/0:55,0:26:18.03:0,18,390	0/1:26,0:14:44.04:47,0,44	0/1:24,2:12:42.54:561,0,43	1/1:18,0:8:21.07:445,21,0	0/0:3,0:1:2.60:0,3,10
chr10	19316961	.	GAGAGGC	G	1918.56	PASS	AB=0.957;AC=22;AF=0.407;AN=54;BaseQRankSum=-2.654;DP=673;FS=2.409;HRun=0;HaplotypeScore=89.5898;InbreedingCoeff=-0.0502;MQ=24.37;MQ0=256;MQRankSum=-0.053;QD=4.19;ReadPosRankSum=-3.632;VQSLOD=1.0840;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:13:29.56:0,30,396	1/1:11,0:4:0.89:2,1,0	0/0:9,0:2:3.01:0,3,42	./.	0/0:19,0:10:8.07:0,8,124	0/1:15,0:5:35.07:48,0,35	0/1:42,0:12:24.16:149,0,24	0/0:10,0:1:3.01:0,3,42	0/0:20,0:8:18.06:0,18,288	1/1:19,7:10:17.54:272,18,0	0/1:2,2:3:0:0,0,0	0/1:24,7:18:50.05:50,0,169	0/0:19,0:15:14.49:0,14,455	0/1:25,0:14:20.92:239,0,21	0/1:38,0:19:65.58:66,0,253	0/1:29,0:11:99:136,0,250	0/1:38,0:15:99:151,0,320	0/1:18,0:6:92.28:92,0,120	0/1:24,0:5:18.44:18,0,114	1/1:16,0:9:13.71:219,14,0	0/1:64,0:20:99:143,0,210	1/1:17,0:11:3.43:55,3,0	1/1:16,0:11:4.23:57,4,0	0/1:44,0:20:19.28:381,0,19	0/0:40,0:18:10.86:0,11,196	0/0:36,0:18:10.38:0,10,598	0/0:18,0:12:12.13:0,12,195	0/0:4,0:1:3.01:0,3,42
chr10	19316967	.	C	CAG	1936.62	PASS	AB=0.878;AC=19;AF=0.365;AN=52;BaseQRankSum=-1.308;DP=632;FS=1.032;HRun=0;HaplotypeScore=69.4052;InbreedingCoeff=-0.0632;MQ=25.04;MQ0=232;MQRankSum=0.800;QD=4.82;ReadPosRankSum=-2.518;VQSLOD=1.4682;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:14:28.78:0,29,395	1/1:12,0:4:1.82:5,2,0	0/0:14,0:2:3.01:0,3,42	./.	0/0:19,0:11:7.17:0,7,123	0/1:12,1:5:34.60:50,0,35	0/1:36,4:11:59.94:148,0,60	0/0:10,0:1:3.01:0,3,42	0/0:17,0:8:18.06:0,18,241	0/1:27,0:10:1.09:231,0,1	./.	0/1:27,1:17:10.86:11,0,180	0/0:18,0:14:35.13:0,35,464	0/1:14,9:13:20.06:235,0,20	0/1:29,4:18:99:113,0,241	0/1:22,4:9:99:136,0,185	0/1:30,7:15:99:155,0,219	0/1:14,2:6:66.53:93,0,67	0/0:21,1:5:4:0,4,80	1/1:10,5:9:15.85:239,16,0	0/1:55,6:21:99:145,0,107	1/1:9,3:9:2.87:54,3,0	1/1:13,3:11:5.85:74,6,0	0/1:27,13:19:48.20:400,0,48	0/0:35,0:16:8.44:0,8,193	0/0:34,0:17:13.30:0,13,615	0/0:15,0:9:16.74:0,17,210	0/0:3,0:1:3.01:0,3,42
chr10	19317035	.	C	CAG	476.82	PASS	AB=0.897;AC=11;AF=0.393;AN=28;BaseQRankSum=-2.341;DP=135;FS=13.406;HRun=0;HaplotypeScore=28.3243;InbreedingCoeff=0.3260;MQ=30.37;MQ0=28;MQRankSum=1.284;QD=11.35;ReadPosRankSum=-2.643;VQSLOD=1.1110;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:4:6.02:0,6,80	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	0/0:7,0:4:2.98:0,3,22	1/1:3,1:4:6.01:79,6,0	0/1:9,0:6:35.92:44,0,36	0/1:5,0:4:0.34:0,0,1	./.	0/0:14,0:6:8.89:0,9,78	0/0:9,0:2:3.01:0,3,32	./.	0/0:2,0:2:3.47:0,3,27	./.	0/0:2,0:2:3.01:0,3,42	./.	0/0:13,0:8:11.48:0,11,197	1/1:3,6:9:8.64:84,9,0	0/1:5,4:7:1.73:268,0,2	1/1:4,1:3:3.01:54,3,0	1/1:0,1:1:3.01:54,3,0
chr10	19317190	.	AGG	A	6292.20	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=1.834;DP=242;FS=4.177;HRun=4;HaplotypeScore=31.7421;InbreedingCoeff=0.8673;MQ=79.48;MQ0=14;MQRankSum=-3.322;QD=34.76;ReadPosRankSum=4.467;VQSLOD=3.7736;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:10:27.07:0,27,435	1/1:0,3:3:9.03:132,9,0	0/0:19,0:13:35.67:0,36,549	0/0:16,0:14:39.01:0,39,621	1/1:0,8:8:15.05:221,15,0	1/1:2,7:7:21.07:309,21,0	1/1:4,9:9:21.07:309,21,0	0/0:11,0:10:30.10:0,30,562	0/0:3,0:3:9.03:0,9,162	1/1:1,8:8:24.07:334,24,0	1/1:0,6:6:12.04:177,12,0	1/1:1,9:9:27.09:397,27,0	1/1:0,5:5:12.04:176,12,0	1/1:1,7:7:18.06:264,18,0	1/1:0,10:10:30.10:441,30,0	1/1:0,4:3:9.03:132,9,0	1/1:0,13:13:32.39:484,32,0	1/1:0,6:6:12.04:176,12,0	1/1:4,5:5:15.02:198,15,0	1/1:0,3:3:6.02:88,6,0	1/1:3,10:10:24.08:353,24,0	1/1:0,4:4:9.03:132,9,0	1/1:0,4:4:6.02:88,6,0	1/1:0,10:10:30.10:441,30,0	1/1:0,5:5:15.05:221,15,0	1/1:0,10:10:30.09:424,30,0	1/1:0,11:11:33.11:485,33,0	1/1:0,8:8:21.07:308,21,0
chr10	19317902	.	GT	G	2554.01	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=8.724;DP=715;FS=0.000;HRun=10;HaplotypeScore=79.2634;InbreedingCoeff=0.9527;MQ=62.76;MQ0=4;MQRankSum=1.114;QD=17.99;ReadPosRankSum=3.420;VQSLOD=4.2847;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:44:85.56:0,86,465	1/1:2,15:17:38.61:330,39,0	0/0:15,0:12:9.23:0,9,188	0/0:12,0:10:21.02:0,21,207	1/1:4,17:20:50.98:442,51,0	0/0:24,1:25:46.14:0,46,737	0/0:24,1:26:36.93:0,37,610	0/0:40,0:41:90.08:0,90,975	0/0:2,0:22:45.45:0,45,227	0/0:29,1:30:37.10:0,37,628	0/0:21,0:21:54.13:0,54,589	0/0:20,1:21:48.13:0,48,531	1/1:2,16:17:41.99:365,42,0	0/0:23,0:23:62.90:0,63,654	0/0:23,2:25:2.03:0,2,472	0/0:23,0:23:60.15:0,60,655	0/0:30,1:31:55.07:0,55,802	0/0:26,0:25:47.88:0,48,497	0/0:23,0:24:48.13:0,48,529	0/0:24,0:24:60.11:0,60,640	0/0:29,0:29:48.13:0,48,531	0/0:34,0:34:87.23:0,87,962	0/0:27,0:27:63.17:0,63,696	0/0:47,1:50:99:0,103,1329	1/1:5,24:29:53.79:468,54,0	1/1:3,20:23:59.98:520,60,0	1/1:5,19:24:50.97:443,51,0	1/1:3,7:10:20.99:182,21,0
chr10	19318287	.	C	CAGA	8386.03	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-13.274;DP=813;FS=3.575;HRun=0;HaplotypeScore=109.9212;InbreedingCoeff=0.9985;MQ=82.73;MQ0=0;MQRankSum=-3.558;QD=45.58;ReadPosRankSum=2.198;VQSLOD=6.6292;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,117,1738	1/1:4,12:16:42.14:869,42,0	0/0:20,0:20:47.83:0,48,667	0/0:28,0:28:59.93:0,60,804	1/1:8,16:25:51.13:1005,51,0	0/0:19,0:19:51.17:0,51,768	0/0:28,0:28:72.21:0,72,1043	0/0:32,0:32:81.26:0,81,1199	0/0:33,0:33:96.33:0,96,1446	0/0:29,0:29:75.25:0,75,1129	0/0:25,0:25:66.22:0,66,993	0/0:43,0:43:99:0,114,1714	1/1:8,32:41:87.30:1825,87,0	0/0:34,0:34:81.23:0,81,1157	0/0:41,0:41:96.32:0,96,1445	0/0:48,0:48:99:0,129,1922	0/0:31,0:31:90.30:0,90,1355	0/0:13,0:13:36.09:0,36,519	0/0:18,0:18:36.12:0,36,542	0/0:26,0:26:78.24:0,78,1134	0/0:40,0:40:99:0,102,1471	0/0:26,0:26:66.21:0,66,974	0/0:22,0:22:51.17:0,51,768	0/0:27,0:27:66.21:0,66,972	1/1:6,22:29:63.22:1326,63,0	1/1:7,22:29:69.24:1412,69,0	1/1:9,25:34:75.26:1569,75,0	1/1:2,6:10:18.06:379,18,0
chr10	19319218	.	TACACACACACAC	T	208	PASS	AB=0.931;AC=11;AF=0.250;AN=44;BaseQRankSum=1.502;DP=481;FS=27.249;HRun=0;HaplotypeScore=159.1554;InbreedingCoeff=-0.0666;MQ=80.65;MQ0=14;MQRankSum=-0.923;QD=1.34;ReadPosRankSum=0.510;VQSLOD=1.3546;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:25:21.07:0,21,319	./.	./.	./.	./.	0/0:8,0:7:8.98:0,9,73	0/1:28,0:24:20.53:21,0,35	0/0:28,0:25:11.28:0,11,69	0/0:17,0:17:9.48:0,9,102	0/0:11,0:11:11.91:0,12,116	1/1:5,0:5:3:25,3,0	0/1:23,0:25:69.85:106,0,70	0/0:12,0:12:9:0,9,88	0/1:15,1:16:71.58:72,0,99	0/1:8,3:11:13.89:14,0,20	0/0:18,0:18:0.53:0,1,105	0/1:21,0:21:25.99:26,0,176	1/1:8,0:7:3.47:9,3,0	0/0:9,0:9:2.98:0,3,22	./.	0/0:40,0:41:26.92:0,27,301	0/1:11,0:13:0.80:1,0,39	0/0:6,0:6:3.01:0,3,85	0/1:28,0:26:42.97:57,0,43	./.	0/0:12,0:12:2.94:0,3,18	0/0:16,0:16:8.97:0,9,89	0/0:5,0:5:9:0,9,88
chr10	19319273	.	GCA	G	1727.14	PASS	AB=0.694;AC=26;AF=0.542;AN=48;BaseQRankSum=3.202;DP=729;FS=7.897;HRun=0;HaplotypeScore=107.7609;InbreedingCoeff=0.3747;MQ=54.90;MQ0=46;MQRankSum=2.283;QD=4.47;ReadPosRankSum=-0.487;VQSLOD=2.2072;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:38:57.93:0,58,829	1/1:7,0:7:12.03:152,12,0	0/1:32,1:6:7.09:7,0,80	0/0:37,0:9:9.47:0,9,138	./.	./.	0/0:11,35:42:3.01:0,3,37	0/0:28,0:25:57.18:0,57,798	0/0:20,0:20:49.04:0,49,707	1/1:7,13:18:35.89:402,36,0	1/1:5,10:14:3.48:35,3,0	1/1:6,28:31:8.79:68,9,0	1/1:4,17:19:4.87:59,5,0	1/1:11,19:28:2.62:24,3,0	0/0:2,26:27:2.98:0,3,22	0/1:7,18:23:0:0,0,0	0/1:8,30:36:52.55:53,0,60	0/1:21,0:17:3.61:330,0,4	1/1:8,7:12:18.02:200,18,0	1/1:0,15:15:0.47:1,0,0	0/0:18,43:58:3.01:0,3,40	0/1:3,22:25:0.21:0,0,0	0/0:3,16:18:1.94:0,2,24	1/1:12,26:38:2.04:6,2,0	./.	1/1:5,20:22:17.49:507,17,0	0/1:4,19:23:27.59:31,0,28	./.
chr10	19319541	.	T	TGAAAATTTTCATACAA	15508.80	PASS	AB=0.920;AC=13;AF=0.232;AN=56;BaseQRankSum=0.339;DP=530;FS=1.509;HRun=0;HaplotypeScore=238.6026;InbreedingCoeff=0.8273;MQ=64.78;MQ0=0;MQRankSum=-12.196;QD=121.16;ReadPosRankSum=-5.327;VQSLOD=3.5583;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:63.22:0,63,2575	1/1:5,2:7:11.97:498,12,0	0/0:8,0:7:3.01:0,3,36	0/0:4,0:4:3.01:0,3,46	1/1:15,8:23:48.12:2740,48,0	0/0:27,0:27:63.22:0,63,2483	0/0:19,0:19:30.10:0,30,1100	0/0:28,0:28:54.18:0,54,1739	0/0:21,0:21:45.15:0,45,1910	0/0:23,0:23:42.14:0,42,1645	0/0:17,0:17:24.08:0,24,878	0/0:14,0:14:30.10:0,30,1229	1/1:18,5:23:42.14:2818,42,0	0/0:20,0:20:45.15:0,45,1930	0/0:11,0:11:24.08:0,24,1004	0/0:26,0:26:45.15:0,45,1975	0/0:23,0:23:45.15:0,45,1868	0/0:15,0:15:30.06:0,30,1149	0/0:11,0:11:27.09:0,27,1059	0/0:23,0:23:51.18:0,51,2102	0/0:10,0:10:21.07:0,21,805	0/0:27,0:27:66.21:0,66,2514	0/0:20,0:20:45.15:0,45,1733	0/0:18,0:17:33.11:0,33,1232	1/1:12,11:23:57.20:3797,57,0	0/1:21,2:23:87.59:2401,0,88	1/1:18,4:22:39.05:2298,39,0	1/1:5,2:7:15.05:956,15,0
chr10	19319578	.	T	TA	8225.14	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-16.529;DP=524;FS=0.344;HRun=7;HaplotypeScore=94.7049;InbreedingCoeff=0.9879;MQ=68.17;MQ0=0;MQRankSum=5.185;QD=30.58;ReadPosRankSum=2.156;VQSLOD=4.3761;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:78.13:0,78,753	0/0:0,0:12:20.37:0,20,60	0/0:11,0:12:23.01:0,23,232	0/0:9,0:8:12:0,12,116	0/0:1,0:26:48.67:0,49,143	1/1:5,21:26:66.20:795,66,0	1/1:1,16:17:45.14:543,45,0	0/0:30,0:30:69.10:0,69,665	0/0:22,0:21:60.06:0,60,568	1/1:1,12:13:36.09:421,36,0	1/1:1,13:14:36.11:429,36,0	1/1:1,12:13:33.10:399,33,0	0/0:1,0:17:32.37:0,32,95	1/1:2,16:18:48.15:580,48,0	0/0:14,0:14:30.05:0,30,289	1/1:1,23:24:60.18:725,60,0	1/1:1,19:20:51.16:616,51,0	1/1:0,18:18:54.17:652,54,0	1/1:5,9:14:27.06:312,27,0	1/1:2,20:22:57.17:688,57,0	1/1:1,7:8:18.06:217,18,0	1/1:2,22:24:63.19:761,63,0	1/1:3,18:21:51.16:616,51,0	1/1:3,14:16:39.12:471,39,0	0/0:3,0:32:58.85:0,59,173	0/0:0,1:23:11.58:0,12,95	0/0:2,0:19:34.63:0,35,102	0/0:0,0:10:20.37:0,20,60
chr10	19320262	.	GT	G	4678.87	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=16.540;DP=678;FS=2.583;HRun=1;HaplotypeScore=86.9717;InbreedingCoeff=0.9996;MQ=88.39;MQ0=0;MQRankSum=-3.666;QD=32.95;ReadPosRankSum=4.744;VQSLOD=4.6747;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,111,1711	1/1:0,15:15:42.13:526,42,0	0/0:19,0:19:53.89:0,54,858	0/0:30,0:30:89.69:0,90,1249	1/1:1,21:22:51.63:639,52,0	0/0:31,0:31:93.32:0,93,1476	0/0:32,0:32:96.27:0,96,1461	0/0:28,0:28:84.28:0,84,1322	0/0:20,0:20:60.19:0,60,935	0/0:31,0:31:90.30:0,90,1395	0/0:24,0:24:72.25:0,72,1148	0/0:29,0:29:87.30:0,87,1391	1/1:0,22:22:60.18:743,60,0	0/0:23,0:23:69.22:0,69,1077	0/0:26,0:26:75.26:0,75,1196	0/0:22,0:22:66.23:0,66,1053	0/0:18,0:18:54.16:0,54,833	0/0:24,0:24:72.21:0,72,1124	0/0:14,0:14:39.13:0,39,604	0/0:17,0:17:48.14:0,48,741	0/0:33,0:33:99:0,99,1583	0/0:23,0:23:69.23:0,69,1088	0/0:32,0:32:87.30:0,87,1390	0/0:23,0:23:69.24:0,69,1095	1/1:1,18:19:52.04:636,52,0	1/1:2,24:26:75.70:928,76,0	1/1:2,26:28:72.70:902,73,0	1/1:0,10:10:24.08:305,24,0
chr10	19321151	.	G	GCTCTCT	4838.37	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=12.153;DP=896;FS=1.871;HRun=0;HaplotypeScore=236.9543;InbreedingCoeff=0.8882;MQ=78.16;MQ0=4;MQRankSum=-10.054;QD=25.07;ReadPosRankSum=-4.468;VQSLOD=3.9244;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:67,0:67:99:0,193,4208	1/1:7,1:8:6.39:133,6,0	0/0:51,0:30:56.99:0,57,933	0/0:61,0:48:40.04:0,40,1429	1/1:32,4:39:20.54:347,21,0	0/0:16,0:16:36.12:0,36,829	0/0:33,0:33:90.29:0,90,1973	0/0:27,0:27:72.10:0,72,1416	0/0:31,0:31:81.19:0,81,1742	0/0:37,0:37:99:0,105,2248	0/0:29,0:29:84.22:0,84,1768	0/0:29,0:29:84.15:0,84,1693	1/1:17,3:23:37.76:787,38,0	0/0:31,0:31:90.18:0,90,1814	0/1:17,0:17:99:175,0,132	0/0:24,0:24:72.25:0,72,1640	0/0:35,0:35:96.29:0,96,2195	0/0:23,0:23:66.17:0,66,1449	0/0:20,0:20:55.13:0,55,940	0/0:32,0:32:90.24:0,90,1864	0/0:66,0:66:99:0,190,4023	0/0:29,0:29:81.21:0,81,1714	0/0:19,0:19:54.17:0,54,1190	0/0:40,0:40:99:0,117,2422	1/1:14,3:27:17.02:329,17,0	1/1:34,2:37:63.57:1764,64,0	1/1:19,3:25:48.74:896,49,0	1/1:15,0:15:29.89:408,30,0
chr10	19321155	.	G	GCTCTCTCT	5068.95	PASS	AB=0.985;AC=17;AF=0.304;AN=56;BaseQRankSum=14.138;DP=913;FS=4.123;HRun=0;HaplotypeScore=273.0688;InbreedingCoeff=0.8958;MQ=76.85;MQ0=4;MQRankSum=-10.742;QD=19.20;ReadPosRankSum=-6.152;VQSLOD=2.5689;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:70,0:70:99:0,171,4157	1/1:8,0:8:5.78:127,6,0	0/0:53,0:31:26.24:0,26,560	0/1:64,0:49:13.16:13,0,883	1/1:39,0:39:31.85:393,32,0	0/0:17,0:17:42.01:0,42,856	0/0:34,0:34:77.95:0,78,1761	0/0:25,0:25:54.03:0,54,1042	0/0:26,0:28:66.14:0,66,1566	0/0:36,0:36:89.30:0,89,2053	0/0:29,0:29:69.87:0,70,1565	0/0:31,0:31:72.19:0,72,1727	1/1:25,0:25:47.96:914,48,0	0/0:29,0:29:66.09:0,66,1565	1/1:4,2:22:14.57:359,15,0	0/0:27,0:27:72.07:0,72,1530	0/0:33,0:33:93.32:0,93,2332	0/0:22,0:22:57.12:0,57,1336	0/0:19,0:19:34.32:0,34,564	0/0:31,0:31:75.18:0,75,1797	0/0:71,0:71:99:0,150,3752	0/0:33,0:33:80.98:0,81,1532	0/0:22,0:22:57.11:0,57,1255	0/0:39,0:39:96.16:0,96,2209	1/1:26,0:26:17.20:268,17,0	1/1:38,0:38:77.20:1810,77,0	1/1:24,0:23:50.32:799,50,0	1/1:16,0:15:26.95:386,27,0
chr10	19324923	.	TACAC	T	271.38	PASS	AC=4;AF=0.080;AN=50;BaseQRankSum=0.222;DP=647;FS=4.699;HRun=0;HaplotypeScore=122.0600;InbreedingCoeff=0.5798;MQ=62.61;MQ0=8;MQRankSum=-1.221;QD=4.11;ReadPosRankSum=0.605;VQSLOD=2.3397;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:33,7:40:8.63:120,9,0	0/0:10,0:10:12.04:0,12,203	./.	./.	0/0:25,0:24:21.03:0,21,330	0/0:19,0:19:24.06:0,24,396	0/0:35,0:41:11.96:0,12,254	./.	1/1:18,6:25:18.05:260,18,0	0/0:30,0:30:36.10:0,36,626	0/0:10,0:10:6.02:0,6,95	0/0:20,0:20:14.81:0,15,280	0/0:23,0:24:21.54:0,22,395	0/0:23,0:23:21.04:0,21,383	0/0:18,0:23:2.74:0,3,51	0/0:22,0:31:6.42:0,6,84	0/0:26,0:25:27.69:0,28,516	0/0:11,0:24:3:0,3,52	0/0:14,0:14:0.47:0,0,1	0/0:15,0:15:8.54:0,9,127	0/0:38,0:38:33.11:0,33,603	0/0:24,0:24:15.28:0,15,258	0/0:14,0:12:11.80:0,12,224	0/0:33,0:32:33.11:0,33,615	0/0:18,0:18:5.98:0,6,77	0/0:23,0:23:30.57:0,31,569	0/0:22,0:19:45.12:0,45,760	0/0:0,0:2:3.01:0,3,52
chr10	19325237	.	T	TA	1693.98	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=-7.677;DP=521;FS=11.168;HRun=9;HaplotypeScore=85.1426;InbreedingCoeff=0.7719;MQ=87.33;MQ0=0;MQRankSum=-3.257;QD=19.93;ReadPosRankSum=-1.488;VQSLOD=2.8307;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,24:27:72.03:778,72,0	0/0:13,0:13:32.99:0,33,286	0/0:22,0:24:34.03:0,34,269	0/0:16,0:16:34.39:0,34,260	0/0:20,0:20:53.97:0,54,468	0/0:24,0:24:50.46:0,50,211	0/0:17,0:17:35.28:0,35,162	0/0:29,0:29:77.94:0,78,672	1/1:3,16:19:39.11:431,39,0	0/0:22,0:22:47.31:0,47,178	0/0:11,0:11:13.22:0,13,100	0/0:14,0:14:23.21:0,23,93	0/0:11,0:11:29.98:0,30,257	0/0:12,0:12:29.66:0,30,127	1/1:1,22:24:36.95:619,37,0	0/0:20,0:19:21.46:0,21,167	0/0:13,0:13:27.43:0,27,133	0/0:17,0:17:39.29:0,39,202	0/1:15,0:15:13.89:14,0,98	0/0:18,0:18:5.91:0,6,107	0/0:14,0:14:32.24:0,32,144	0/0:20,0:20:5:0,5,177	0/0:17,0:17:32.86:0,33,152	0/0:21,0:21:47.04:0,47,229	0/0:24,0:24:65.99:0,66,573	0/0:24,0:24:35.78:0,36,453	0/0:26,0:26:53.96:0,54,466	0/0:9,0:9:20.99:0,21,182
chr10	19326597	.	G	GGCGAT	33610.51	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-1.048;DP=546;FS=10.349;HRun=0;HaplotypeScore=118.6205;InbreedingCoeff=0.9854;MQ=68.39;MQ0=0;MQRankSum=-9.919;QD=68.45;ReadPosRankSum=4.389;VQSLOD=5.6558;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,19:28:54.19:1701,54,0	1/1:0,5:6:18.06:566,18,0	0/0:18,0:18:37.28:0,37,585	0/0:10,0:10:17.93:0,18,221	1/1:4,8:12:27.09:850,27,0	1/1:8,21:29:69.24:2174,69,0	1/1:8,19:28:66.23:1991,66,0	0/0:27,0:27:66.19:0,66,1268	1/1:8,15:23:60.21:1767,60,0	1/1:5,8:13:33.11:982,33,0	1/1:2,6:9:18.06:567,18,0	1/1:3,19:23:63.16:1910,63,0	1/1:4,16:21:48.16:1482,48,0	1/1:8,21:29:69.24:2077,69,0	1/1:8,22:34:81.22:2381,81,0	1/1:3,19:22:66.23:2009,66,0	1/1:6,21:30:57.20:1798,57,0	1/1:8,12:21:36.12:1057,36,0	1/1:6,12:18:53.21:1526,53,0	1/1:7,8:16:24.08:756,24,0	1/1:4,14:18:30.10:931,30,0	1/1:5,10:17:30.10:945,30,0	1/1:1,6:7:18.06:567,18,0	1/1:4,13:21:23.91:723,24,0	1/1:3,14:19:45.15:1411,45,0	1/1:5,13:19:54.11:1544,54,0	1/1:5,10:17:36.12:1136,36,0	1/1:0,9:11:24.08:760,24,0
chr10	19328232	.	AACAC	A	10697.13	PASS	AB=0.701;AC=42;AF=0.750;AN=56;BaseQRankSum=-2.526;DP=708;FS=1.051;HRun=0;HaplotypeScore=148.5804;InbreedingCoeff=0.7695;MQ=56.89;MQ0=11;MQRankSum=2.711;QD=21.22;ReadPosRankSum=5.675;VQSLOD=4.3020;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:36:48.16:0,48,844	1/1:5,8:13:17.82:257,18,0	0/0:40,0:22:12.04:0,12,209	0/0:48,0:26:8.76:0,9,103	1/1:11,7:20:21.02:282,21,0	1/1:11,15:27:8.91:706,9,0	1/1:11,15:28:45.14:680,45,0	0/0:34,0:33:40.93:0,41,604	0/0:7,0:18:24.06:0,24,391	1/1:5,17:25:60.18:900,60,0	1/1:10,8:18:20.39:395,20,0	1/1:8,14:23:25.99:535,26,0	1/1:9,11:21:30.09:440,30,0	1/1:7,13:23:25.97:362,26,0	0/0:13,0:26:54.14:0,54,974	1/1:9,11:20:24.08:384,24,0	0/1:14,15:30:19.18:579,0,19	1/1:10,18:29:42.51:674,43,0	1/1:15,5:20:9.04:187,9,0	1/1:5,8:14:30:384,30,0	1/1:18,19:38:33.11:528,33,0	1/1:8,17:28:48.11:696,48,0	1/1:12,9:22:24.05:361,24,0	1/1:9,8:18:21.07:336,21,0	1/1:4,12:17:30.09:440,30,0	1/1:14,12:27:39.08:557,39,0	1/1:10,14:25:46.96:746,47,0	0/1:10,5:15:16.41:267,0,16
chr10	19331308	.	G	GAC	3689.99	PASS	AB=0.551;AC=31;AF=0.554;AN=56;BaseQRankSum=8.588;DP=494;FS=2.207;HRun=0;HaplotypeScore=97.0616;InbreedingCoeff=0.9059;MQ=69.10;MQ0=14;MQRankSum=-0.594;QD=12.90;ReadPosRankSum=3.301;VQSLOD=3.7128;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:32.75:0,33,266	0/0:9,0:9:23.97:0,24,198	0/0:23,0:15:18.25:0,18,236	0/0:42,0:20:16.45:0,16,247	0/0:18,0:17:24.43:0,24,197	1/1:21,0:21:32.76:260,33,0	0/1:5,22:26:0:0,0,0	0/0:21,0:21:42.64:0,43,329	0/0:17,0:17:35.85:0,36,285	1/1:28,0:27:35.65:532,36,0	1/1:11,0:10:17.94:142,18,0	1/1:13,0:13:20.51:170,21,0	1/1:22,0:22:51.77:399,52,0	1/1:6,10:15:3.01:56,3,0	0/0:10,0:10:23.96:0,24,197	1/1:2,18:20:3.91:59,4,0	1/1:22,0:22:44.66:392,45,0	1/1:16,0:15:32.58:291,33,0	1/1:15,0:15:30.40:274,30,0	1/1:14,0:13:29.93:261,30,0	1/1:23,0:23:38.93:359,39,0	1/1:15,0:15:20.97:172,21,0	1/1:7,0:7:6.93:51,7,0	1/1:15,0:15:29.95:271,30,0	0/0:11,0:11:17.97:0,18,148	0/0:15,0:15:28.43:0,28,247	0/0:14,0:12:17.90:0,18,136	0/0:5,0:4:11.98:0,12,98
chr10	19331780	.	CTG	C	432.28	PASS	AB=0.981;AC=4;AF=0.071;AN=56;BaseQRankSum=5.196;DP=689;FS=18.156;HRun=0;HaplotypeScore=162.2488;InbreedingCoeff=0.5043;MQ=49.74;MQ0=13;MQRankSum=2.455;QD=5.21;ReadPosRankSum=-2.234;VQSLOD=1.5796;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:32,1:32:47.64:418,48,0	0/0:14,0:14:22.20:0,22,324	0/0:20,0:7:17.97:0,18,259	0/1:25,0:5:1.33:1,0,19	0/0:16,0:16:18.04:0,18,312	0/0:17,0:16:25.85:0,26,425	0/0:19,0:19:35.79:0,36,609	0/0:41,0:40:99:0,111,1583	0/1:24,1:25:51.47:120,0,51	0/0:30,0:29:84.09:0,84,1326	0/0:21,0:21:28.71:0,29,452	0/0:25,0:25:49.11:0,49,782	0/0:22,1:23:57.09:0,57,928	0/0:18,0:18:48.15:0,48,877	0/0:35,0:33:53.17:0,53,1039	0/0:26,0:26:69.07:0,69,1152	0/0:31,0:30:71.89:0,72,1278	0/0:27,0:27:46.29:0,46,1118	0/0:17,1:16:47.08:0,47,644	0/0:24,0:24:44.91:0,45,752	0/0:30,0:29:49.60:0,50,820	0/0:9,0:8:12:0,12,207	0/0:24,0:23:33.10:0,33,582	0/0:29,0:29:65.82:0,66,1107	0/0:23,0:23:27.55:0,28,487	0/0:36,0:32:42.97:0,43,1110	0/0:45,0:42:64.80:0,65,1147	0/0:5,0:4:12.04:0,12,231
chr10	19331808	.	G	GTC	3736.08	PASS	AB=0.791;AC=41;AF=0.759;AN=54;BaseQRankSum=-1.009;DP=734;FS=4.003;HRun=0;HaplotypeScore=153.3673;InbreedingCoeff=-0.3068;MQ=53.00;MQ0=11;MQRankSum=0.053;QD=5.18;ReadPosRankSum=1.260;VQSLOD=3.1322;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:14,13:28:19.32:212,0,19	0/1:13,0:14:1.79:19,0,2	./.	0/1:21,0:8:14.38:14,0,25	0/1:23,0:22:9.25:9,0,15	1/1:21,0:25:3.55:111,4,0	0/1:15,6:33:85.92:165,0,86	1/1:35,0:33:8.91:45,9,0	0/1:11,2:29:73.28:172,0,73	1/1:12,3:30:39.44:299,39,0	1/1:9,2:18:5.84:73,6,0	1/1:14,2:26:27.04:307,27,0	0/1:9,3:27:7.64:231,0,8	1/1:7,0:14:9:79,9,0	0/1:38,0:34:22.35:47,0,22	1/1:9,2:26:33.02:329,33,0	0/1:19,1:36:59.06:107,0,59	0/1:11,4:30:15.13:244,0,15	1/1:18,0:16:11.04:103,11,0	1/1:15,1:25:18.72:185,19,0	0/1:22,1:25:48.12:125,0,48	1/1:15,3:18:12.33:167,12,0	1/1:12,8:22:15.32:213,15,0	0/1:14,4:31:38.91:241,0,39	0/1:28,0:27:14.76:19,0,15	1/1:41,0:37:2.05:163,2,0	1/1:46,0:43:0.56:55,1,0	1/1:8,0:7:0.29:1,0,0
chr10	19332027	.	AGT	A	246.13	PASS	AB=0.902;AC=20;AF=0.400;AN=50;BaseQRankSum=2.856;DP=542;FS=0.000;HRun=0;HaplotypeScore=78.4694;InbreedingCoeff=0.5203;MQ=69.96;MQ0=3;MQRankSum=1.047;QD=1.58;ReadPosRankSum=2.151;VQSLOD=1.3720;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:36:24.04:0,24,290	1/1:1,3:4:6.02:64,6,0	./.	./.	1/1:10,1:11:3.01:32,3,0	0/0:19,0:19:15.05:0,15,208	0/0:33,0:33:15.94:0,16,218	0/0:23,0:22:8.07:0,8,45	1/1:14,2:17:5.85:46,6,0	0/0:22,0:21:20.95:0,21,207	0/0:9,0:16:6:0,6,52	0/1:15,3:18:17.05:17,0,122	0/0:19,0:19:15.04:0,15,201	0/1:17,1:18:16.56:17,0,141	1/1:16,3:18:3:32,3,0	0/0:13,0:13:12.04:0,12,175	0/0:20,0:20:13.84:0,14,158	0/0:25,0:25:15.03:0,15,199	./.	1/1:14,2:16:3.01:32,3,0	0/0:34,0:34:9.49:0,9,114	0/0:20,0:20:3.01:0,3,44	0/0:11,0:11:12.02:0,12,151	0/0:32,0:32:12.02:0,12,155	1/1:10,3:13:3:31,3,0	1/1:15,0:15:3:27,3,0	1/1:16,1:17:3:32,3,0	1/1:6,1:8:8.86:78,9,0
chr10	19333137	.	T	TTCC	988.77	PASS	AB=1.000;AC=13;AF=0.241;AN=54;BaseQRankSum=2.663;DP=203;FS=11.828;HRun=0;HaplotypeScore=37.3933;InbreedingCoeff=0.6649;MQ=49.56;MQ0=19;MQRankSum=-0.327;QD=17.35;ReadPosRankSum=3.957;VQSLOD=1.2655;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:8:15.64:0,16,109	1/1:5,0:5:12:105,12,0	0/0:14,0:10:12.67:0,13,204	0/0:5,0:1:3.01:0,3,31	1/1:13,0:12:32.78:273,33,0	0/0:7,0:5:7.90:0,8,62	0/0:9,0:7:20.81:0,21,157	0/0:12,0:5:14.94:0,15,119	0/1:11,0:11:24.29:24,0,59	0/0:6,0:5:14.98:0,15,133	0/0:6,0:6:8.60:0,9,72	1/1:3,0:3:0.89:2,1,0	0/0:4,0:4:7.98:0,8,74	0/0:7,0:6:15:0,15,131	0/0:11,0:10:21.11:0,21,161	0/0:9,0:9:15.88:0,16,132	0/0:8,0:7:14.37:0,14,109	0/0:5,0:5:7.56:0,8,74	0/0:3,0:2:6.01:0,6,58	0/0:6,0:6:13.28:0,13,98	0/0:2,0:2:3:0,3,25	0/0:11,0:9:10.41:0,10,96	0/0:5,0:5:9.07:0,9,69	0/0:5,0:5:11.85:0,12,83	1/1:8,0:8:23.75:244,24,0	1/1:7,6:13:38.86:405,39,0	1/1:4,0:3:9.02:102,9,0	./.
chr10	19335053	.	TC	T	6440.29	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=20.574;DP=646;FS=12.238;HRun=1;HaplotypeScore=163.0400;InbreedingCoeff=0.9914;MQ=86.82;MQ0=0;MQRankSum=-20.330;QD=20.91;ReadPosRankSum=0.854;VQSLOD=3.4732;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:61,0:61:99:0,184,2877	0/0:12,0:12:36.12:0,36,576	0/0:32,0:32:96.32:0,96,1512	0/0:23,0:23:69.20:0,69,1041	0/0:31,0:31:93.30:0,93,1464	1/1:0,14:16:44.96:389,45,0	1/1:0,24:30:82.96:664,83,0	0/0:37,0:37:99:0,105,1630	0/0:26,0:26:78.25:0,78,1223	1/1:0,19:21:61.40:544,61,0	1/1:0,18:21:54.54:399,55,0	1/1:0,18:20:53.91:445,54,0	1/1:3,26:30:85.96:684,86,0	1/1:1,15:18:50.82:409,51,0	0/0:21,0:21:63.21:0,63,1007	1/1:0,20:20:59.84:480,60,0	1/1:0,10:15:30.98:220,31,0	1/1:3,9:12:33.76:297,34,0	1/1:2,16:20:56.66:513,57,0	1/1:0,14:18:47.88:386,48,0	1/1:2,8:14:25.11:160,25,0	1/1:0,15:22:46.99:361,47,0	1/1:0,19:21:53.84:423,54,0	1/1:0,8:9:8.96:68,9,0	0/0:28,0:28:84.29:0,84,1340	0/0:32,0:32:93.32:0,93,1487	0/0:23,0:23:69.24:0,69,1094	0/0:12,0:12:36.11:0,36,552
chr10	19335056	.	G	GGTC	8991.98	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=20.430;DP=643;FS=18.404;HRun=0;HaplotypeScore=177.1553;InbreedingCoeff=0.9912;MQ=85.76;MQ0=0;MQRankSum=-20.424;QD=29.01;ReadPosRankSum=1.987;VQSLOD=3.5866;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:59,0:59:99:0,178,3299	0/0:12,0:12:36.12:0,36,671	0/0:32,0:32:96.25:0,96,1643	0/0:21,0:21:60.18:0,60,1032	0/0:32,0:32:93.31:0,93,1702	1/1:3,14:17:42.07:517,42,0	1/1:6,24:30:72.69:862,73,0	0/0:34,0:34:93.32:0,93,1727	0/0:26,0:26:78.25:0,78,1423	1/1:3,19:22:62.65:812,63,0	1/1:3,18:21:45.13:523,45,0	1/1:2,18:20:54.17:654,54,0	1/1:2,26:28:81.22:949,81,0	1/1:3,15:17:43.48:505,43,0	0/0:22,0:22:66.21:0,66,1199	1/1:0,20:20:60.18:721,60,0	1/1:8,10:18:29.41:321,29,0	1/1:1,9:10:24.97:338,25,0	1/1:3,16:19:56.53:745,57,0	1/1:5,14:19:42.05:506,42,0	1/1:7,8:15:23.44:268,23,0	1/1:7,15:22:45.13:538,45,0	1/1:2,19:21:54.16:630,54,0	1/1:2,8:10:9.02:102,9,0	0/0:28,0:28:81.28:0,81,1510	0/0:31,0:31:93.30:0,93,1698	0/0:23,0:23:69.24:0,69,1284	0/0:13,0:13:39.10:0,39,664
chr10	19335057	.	A	AT	9271.04	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=20.738;DP=698;FS=13.680;HRun=0;HaplotypeScore=178.0027;InbreedingCoeff=0.9955;MQ=82.45;MQ0=0;MQRankSum=-20.510;QD=25.47;ReadPosRankSum=0.383;VQSLOD=3.2749;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:60,0:60:99:0,178,2476	0/0:12,0:12:36.12:0,36,504	0/0:31,0:31:93.29:0,93,1235	0/0:21,0:21:60.14:0,60,773	0/0:32,0:32:96.31:0,96,1323	1/1:6,14:20:51.13:574,51,0	1/1:9,24:33:80.86:858,81,0	0/0:34,0:34:96.31:0,96,1327	0/0:27,0:27:78.26:0,78,1090	1/1:7,19:26:69.09:802,69,0	1/1:7,18:25:47.85:494,48,0	1/1:10,18:28:78.19:857,78,0	1/1:7,26:33:90.21:971,90,0	1/1:6,15:20:48.10:517,48,0	0/0:22,0:22:66.22:0,66,921	1/1:2,20:22:66.17:717,66,0	1/1:12,10:22:29.99:360,30,0	1/1:5,9:14:35.59:394,36,0	1/1:5,16:21:47.60:632,48,0	1/1:7,14:21:48.12:537,48,0	1/1:13,8:21:29.61:290,30,0	1/1:7,16:23:44.80:486,45,0	1/1:5,19:24:63.13:663,63,0	1/1:2,8:10:12.01:120,12,0	0/0:28,0:28:84.26:0,84,1155	0/0:31,0:31:93.30:0,93,1286	0/0:23,0:23:69.23:0,69,965	0/0:13,0:13:39.13:0,39,545
chr10	19335326	.	A	AG	2340.79	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-10.823;DP=716;FS=0.506;HRun=2;HaplotypeScore=64.9282;InbreedingCoeff=0.9989;MQ=89.66;MQ0=0;MQRankSum=-4.218;QD=36.01;ReadPosRankSum=1.061;VQSLOD=4.1498;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,36:40:99:1512,105,0	0/0:8,0:8:24.06:0,24,285	0/0:31,0:31:93.29:0,93,1141	0/0:25,0:25:52.39:0,52,622	0/0:24,0:24:72.23:0,72,892	0/0:28,0:28:81.24:0,81,992	0/0:38,0:38:99:0,114,1387	0/0:28,0:28:75.20:0,75,896	1/1:1,23:24:66.22:950,66,0	0/0:23,0:23:66.21:0,66,816	0/0:17,0:17:48.14:0,48,582	0/0:22,0:22:60.19:0,60,743	0/0:20,0:20:57.18:0,57,706	0/0:20,0:20:60.18:0,60,731	0/0:35,0:35:99:0,105,1302	0/0:25,0:25:69.20:0,69,842	0/0:36,0:36:90.28:0,90,1115	0/0:26,0:26:75.15:0,75,895	0/0:22,0:22:66.21:0,66,817	0/0:24,0:24:66.21:0,66,818	0/0:24,0:24:72.21:0,72,880	0/0:24,0:24:63.20:0,63,781	0/0:28,0:28:78.23:0,78,953	0/0:24,0:24:69.22:0,69,852	0/0:29,0:29:87.27:0,87,1079	0/0:18,0:18:54.17:0,54,670	0/0:40,0:39:99:0,120,1488	0/0:12,0:12:36.11:0,36,446
chr10	19338248	.	A	AC	22526.10	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-3.892;DP=812;FS=4.006;HRun=3;HaplotypeScore=76.9622;InbreedingCoeff=0.9536;MQ=49.38;MQ0=44;MQRankSum=5.606;QD=30.61;ReadPosRankSum=7.606;VQSLOD=3.9363;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,57:51:99:1696,126,0	1/1:1,10:9:24.08:336,24,0	0/0:37,0:28:69.26:0,69,897	0/0:38,0:30:87.25:0,87,1024	1/1:2,31:28:65.94:842,66,0	1/1:1,20:21:54.18:748,54,0	1/1:0,29:29:51.10:667,51,0	1/1:4,6:8:12.03:154,12,0	1/1:2,36:36:87.24:1173,87,0	1/1:3,25:25:66.22:924,66,0	1/1:0,12:12:24.08:336,24,0	1/1:2,36:36:93.31:1300,93,0	1/1:2,37:38:99:1378,99,0	1/1:2,37:37:90.30:1259,90,0	1/1:2,37:36:90.30:1258,90,0	1/1:1,25:23:60.07:773,60,0	1/1:2,33:35:99:1386,99,0	1/1:3,15:18:45.15:630,45,0	1/1:2,11:10:30.10:420,30,0	1/1:3,22:21:48.16:670,48,0	1/1:2,52:53:99:1804,129,0	1/1:1,33:31:69.19:937,69,0	1/1:0,20:18:33.11:462,33,0	1/1:3,27:29:63.21:881,63,0	1/1:1,23:22:54.15:730,54,0	1/1:4,29:29:78.22:1054,78,0	1/1:2,18:19:45.06:585,45,0	1/1:3,4:7:9.03:126,9,0
chr10	19338925	.	GGGT	G	668.58	PASS	AB=1.000;AC=4;AF=0.071;AN=56;BaseQRankSum=-0.412;DP=450;FS=8.651;HRun=0;HaplotypeScore=95.4701;InbreedingCoeff=0.4999;MQ=74.01;MQ0=1;MQRankSum=3.147;QD=9.29;ReadPosRankSum=0.034;VQSLOD=1.8986;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:42.12:0,42,595	0/0:6,0:6:14.95:0,15,121	0/0:29,0:24:59.18:0,59,885	0/1:24,0:19:1.99:2,0,406	0/0:25,0:25:71.22:0,71,613	0/0:17,0:17:17.75:0,18,381	0/0:15,0:15:23.65:0,24,251	0/1:28,0:28:32.73:33,0,380	0/0:7,0:7:18.02:0,18,265	0/0:9,0:9:23.61:0,24,205	0/0:15,0:15:33.32:0,33,303	0/0:9,0:9:21.04:0,21,218	0/0:5,0:5:14.92:0,15,146	0/0:15,0:15:41.97:0,42,462	1/1:4,16:19:51.13:741,51,0	0/0:13,0:13:29.10:0,29,317	0/0:19,0:19:55.60:0,56,522	0/0:16,0:14:38.84:0,39,385	0/0:14,0:14:41.79:0,42,399	0/0:21,0:21:54.67:0,55,544	0/0:11,0:10:24.53:0,25,240	0/0:13,0:13:24.94:0,25,266	0/0:12,0:12:25.92:0,26,199	0/0:21,0:20:49.79:0,50,487	0/0:17,0:17:50.21:0,50,413	0/0:21,0:21:60.49:0,60,546	0/0:24,0:21:51.44:0,51,547	0/0:6,0:6:18:0,18,164
chr10	19338991	.	TA	T	10460.06	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-4.282;DP=475;FS=2.695;HRun=8;HaplotypeScore=57.6747;InbreedingCoeff=0.9202;MQ=72.72;MQ0=0;MQRankSum=-5.350;QD=23.14;ReadPosRankSum=4.608;VQSLOD=5.4316;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,17:17:48.08:463,48,0	1/1:1,7:8:21.03:201,21,0	0/0:14,0:13:10.99:0,11,135	0/0:9,0:8:7.54:0,8,44	1/1:3,26:29:68.99:644,69,0	1/1:2,26:28:78.08:741,78,0	1/1:0,7:7:21.03:202,21,0	1/1:7,28:35:81.02:752,81,0	1/1:0,8:8:18.03:173,18,0	1/1:5,18:23:63.94:593,64,0	1/1:0,15:15:42.02:395,42,0	1/1:0,10:10:27.04:260,27,0	1/1:0,12:12:27.04:260,27,0	1/1:0,17:17:45.07:433,45,0	1/1:8,12:20:45.05:430,45,0	1/1:1,14:15:36.06:346,36,0	1/1:3,14:17:36.06:347,36,0	1/1:4,18:21:57.03:533,57,0	1/1:1,17:18:51.01:468,51,0	1/1:3,16:19:41.89:388,42,0	1/1:1,9:10:21.03:202,21,0	1/1:4,12:16:36.06:346,36,0	1/1:1,25:26:57.02:536,57,0	1/1:1,11:12:26.98:250,27,0	1/1:3,18:21:48.07:461,48,0	1/1:4,18:22:56.93:515,57,0	1/1:3,15:15:36.05:347,36,0	1/1:1,6:7:18.03:174,18,0
chr10	19339216	.	AGAT	A	8049.65	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=14.794;DP=692;FS=3.443;HRun=0;HaplotypeScore=100.0902;InbreedingCoeff=0.9960;MQ=89.38;MQ0=0;MQRankSum=-4.072;QD=47.91;ReadPosRankSum=5.579;VQSLOD=6.9691;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,30:30:78.07:1453,78,0	1/1:0,5:5:15.05:280,15,0	0/0:25,0:25:72.13:0,72,1492	0/0:30,0:30:90.27:0,90,2061	1/1:0,23:22:57.20:1062,57,0	0/0:30,0:30:90.30:0,90,2168	0/0:20,0:20:57.20:0,57,1405	0/0:48,0:48:99:0,144,3391	1/1:0,30:30:78.27:1453,78,0	0/0:24,0:23:69.24:0,69,1661	0/0:16,0:16:48.16:0,48,1178	0/0:25,0:25:75.26:0,75,1845	0/0:31,0:31:93.32:0,93,2260	0/0:36,0:36:99:0,108,2615	0/0:29,0:29:87.28:0,87,2095	0/0:28,0:28:84.29:0,84,2046	0/0:28,0:28:84.29:0,84,2066	0/0:19,0:19:57.20:0,57,1397	0/0:15,0:15:45.15:0,45,1074	0/0:25,0:25:75.26:0,75,1842	0/0:37,0:37:99:0,111,2668	0/0:14,0:14:42.14:0,42,1010	0/0:17,0:17:51.18:0,51,1245	0/0:27,0:27:81.28:0,81,1992	1/1:0,25:24:66.23:1230,66,0	1/1:0,22:20:57.20:1062,57,0	1/1:0,24:24:63.22:1174,63,0	1/1:0,9:9:18.06:335,18,0
chr10	19339331	.	TACACACACACAC	T	2056.79	PASS	AB=0.718;AC=12;AF=0.222;AN=54;BaseQRankSum=5.145;DP=739;FS=8.807;HRun=0;HaplotypeScore=234.9309;InbreedingCoeff=0.5635;MQ=61.92;MQ0=19;MQRankSum=-5.493;QD=10.94;ReadPosRankSum=0.901;VQSLOD=1.2108;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:29:19.79:0,20,415	0/0:5,0:7:2.99:0,3,24	./.	0/0:48,0:23:2.04:0,2,6	1/1:13,6:19:6.22:142,6,0	0/0:25,0:24:24.91:0,25,1317	0/0:31,0:35:24.97:0,25,1144	1/1:41,0:42:0.18:2,0,0	0/1:17,0:30:42.14:42,0,208	0/0:20,0:19:33.11:0,33,1445	0/0:13,0:13:3:0,3,150	0/0:22,0:27:9.03:0,9,351	0/0:33,0:32:15.01:0,15,613	0/0:25,0:25:30.10:0,30,1519	0/0:17,0:29:36.11:0,36,916	0/0:16,0:30:19.66:0,20,886	0/0:30,0:30:38.22:0,38,1629	0/0:10,0:14:12.04:0,12,438	0/0:11,0:11:10.39:0,10,510	0/0:19,0:18:21.07:0,21,969	0/0:51,0:49:45.14:0,45,2129	0/0:20,0:20:20.98:0,21,913	0/0:15,0:14:15.05:0,15,828	0/0:24,0:32:21.96:0,22,1067	1/1:11,9:20:6:206,6,0	0/1:22,12:34:99:476,0,121	1/1:11,10:23:26.93:845,27,0	1/1:12,7:20:15.05:495,15,0
chr10	19339348	.	A	ACACACA	2824.15	PASS	AB=1.000;AC=31;AF=0.646;AN=48;BaseQRankSum=-7.946;DP=729;FS=1.715;HRun=0;HaplotypeScore=188.9186;InbreedingCoeff=0.6617;MQ=48.20;MQ0=24;MQRankSum=4.555;QD=6.87;ReadPosRankSum=-2.963;VQSLOD=2.0748;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:38:8.76:0,9,96	./.	./.	./.	0/0:27,0:26:3.01:0,3,43	1/1:27,0:26:15.34:274,15,0	1/1:25,0:25:3.48:39,3,0	./.	0/0:31,0:30:23.09:0,23,298	1/1:19,0:18:15.85:266,16,0	1/1:18,0:18:2.56:61,3,0	1/1:27,0:27:3.01:96,3,0	1/1:22,7:29:5.98:79,6,0	1/1:27,0:27:18.06:371,18,0	0/0:26,0:26:15.05:0,15,209	1/1:32,0:31:11.74:267,12,0	1/1:33,0:33:12.23:232,12,0	1/1:15,0:15:7.89:52,8,0	1/1:9,0:9:0.89:2,1,0	1/1:18,0:17:12:182,12,0	1/1:59,0:55:30.04:562,30,0	1/1:21,0:20:11.59:266,12,0	1/1:17,0:16:15.02:216,15,0	0/1:34,0:34:32.92:33,0,39	0/0:24,0:24:5.65:0,6,83	0/0:36,0:36:9.50:0,9,126	0/0:23,0:23:24.38:0,24,318	0/0:15,0:15:13.77:0,14,141
chr10	19340654	.	TC	T	1079.49	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.093;DP=664;FS=9.406;HRun=1;HaplotypeScore=61.0997;InbreedingCoeff=0.9919;MQ=93.71;MQ0=0;MQRankSum=-1.341;QD=32.71;ReadPosRankSum=1.763;VQSLOD=2.4775;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:99:0,99,1570	0/0:17,0:17:51.17:0,51,815	0/0:32,0:32:96.26:0,96,1391	0/0:26,0:26:75.25:0,75,1166	0/0:24,0:24:69.24:0,69,1102	0/0:24,0:24:72.23:0,72,1115	0/0:19,0:19:57.19:0,57,911	0/0:34,0:34:99:0,102,1547	0/0:21,0:21:63.20:0,63,980	0/0:18,0:18:54.18:0,54,864	0/0:17,0:17:48.15:0,48,733	0/0:19,0:19:57.18:0,57,875	0/0:32,0:32:96.31:0,96,1494	0/0:27,0:27:81.28:0,81,1294	1/1:0,33:33:84.28:1174,84,0	0/0:22,0:22:66.20:0,66,1009	0/0:23,0:23:69.18:0,69,1067	0/0:20,0:20:60.16:0,60,931	0/0:25,0:25:75.25:0,75,1187	0/0:27,0:27:81.28:0,81,1283	0/0:12,0:12:36.12:0,36,575	0/0:20,0:20:57.18:0,57,887	0/0:21,0:21:60.19:0,60,934	0/0:19,0:19:57.09:0,57,879	0/0:33,0:32:96.29:0,96,1486	0/0:22,0:22:63.19:0,63,982	0/0:38,0:38:99:0,114,1807	0/0:6,0:6:18.06:0,18,284
chr10	19341578	.	ACTCGGG	A	8178.48	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=16.305;DP=775;FS=1.132;HRun=0;HaplotypeScore=173.1951;InbreedingCoeff=0.9998;MQ=82.80;MQ0=0;MQRankSum=-15.626;QD=55.26;ReadPosRankSum=-0.693;VQSLOD=4.9174;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,126,4424	1/1:0,12:12:30.10:672,30,0	0/0:21,0:21:63.13:0,63,1899	0/0:28,0:28:62.24:0,62,2161	1/1:0,33:33:63.26:1195,63,0	0/0:25,0:25:72.25:0,72,2659	0/0:23,0:23:69.24:0,69,2553	0/0:36,0:36:99:0,108,3754	0/0:24,0:24:72.23:0,72,2520	0/0:30,0:30:90.31:0,90,3338	0/0:15,0:15:45.13:0,45,1489	0/0:28,0:28:81.28:0,81,2967	0/0:34,0:34:99:0,102,3652	0/0:27,0:27:81.28:0,81,2898	0/0:37,0:37:99:0,111,4110	0/0:40,0:40:99:0,120,4236	0/0:24,0:24:72.25:0,72,2658	0/0:19,0:19:57.20:0,57,2107	0/0:19,0:19:57.18:0,57,1914	0/0:31,0:31:93.32:0,93,3437	0/0:51,0:51:99:0,153,5225	0/0:33,0:33:99:0,99,3610	0/0:20,0:20:60.21:0,60,2232	0/0:20,0:20:60.21:0,60,2194	1/1:0,29:29:71.92:1278,72,0	1/1:0,38:38:99:2733,114,0	1/1:0,26:26:71.98:1606,72,0	1/1:0,10:10:30.10:695,30,0
chr10	19342949	.	GTTTGTTT	G	11085.25	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=8.813;DP=655;FS=0.000;HRun=0;HaplotypeScore=151.9752;InbreedingCoeff=0.9766;MQ=62.43;MQ0=7;MQRankSum=-10.249;QD=29.02;ReadPosRankSum=3.436;VQSLOD=4.0525;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:90.14:0,90,1979	0/0:19,0:19:39.13:0,39,1203	0/0:26,0:21:21.52:0,22,356	0/0:22,0:15:17.08:0,17,396	0/0:23,0:23:57.20:0,57,1844	1/1:3,17:20:33.11:774,33,0	1/1:7,10:17:21.07:445,21,0	0/0:33,0:33:66.16:0,66,1352	0/0:16,0:16:36.11:0,36,785	1/1:9,14:22:45.15:876,45,0	1/1:4,16:20:41.99:778,42,0	1/1:2,11:13:18.06:422,18,0	1/1:5,19:24:23.16:896,23,0	1/1:4,18:22:39.13:902,39,0	0/0:23,0:23:48.16:0,48,1294	1/1:6,20:26:29.81:703,30,0	1/1:9,34:43:25.63:554,26,0	1/1:8,18:26:15.01:293,15,0	1/1:7,11:17:33.06:549,33,0	1/1:10,35:45:90.30:1933,90,0	1/1:4,8:12:6.02:141,6,0	1/1:4,15:18:39.13:780,39,0	1/1:6,20:25:32.24:689,32,0	1/1:5,23:28:18.05:351,18,0	0/0:18,0:18:51.18:0,51,1823	0/0:23,0:23:60.17:0,60,1917	0/0:28,0:27:78.26:0,78,2170	0/0:7,0:7:18.06:0,18,580
chr10	19342962	.	T	TTTTTG	843.34	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-3.697;DP=632;FS=4.014;HRun=0;HaplotypeScore=165.4696;InbreedingCoeff=0.9509;MQ=60.06;MQ0=7;MQRankSum=1.479;QD=40.16;ReadPosRankSum=0.556;VQSLOD=3.2630;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:62.11:0,62,1117	0/0:19,0:19:36.11:0,36,618	0/0:25,0:19:20.52:0,21,314	0/0:24,0:16:25.13:0,25,418	0/0:24,0:24:54.17:0,54,927	0/0:17,0:17:33.10:0,33,401	0/0:12,0:12:24.02:0,24,267	0/0:33,0:33:35.02:0,35,545	0/0:17,0:17:21.07:0,21,347	0/0:19,0:18:35.97:0,36,385	0/0:18,0:18:42.06:0,42,476	0/0:14,0:14:24.06:0,24,291	0/0:23,0:23:43.90:0,44,570	0/0:20,0:20:42.10:0,42,506	1/1:4,16:21:33.11:938,33,0	0/0:21,0:21:29.89:0,30,365	0/0:41,0:41:42.03:0,42,464	0/0:28,0:28:30.41:0,30,365	0/0:16,0:14:29.41:0,29,388	0/0:38,0:38:84.23:0,84,1010	0/0:11,0:11:12:0,12,141	0/0:22,0:21:54.03:0,54,642	0/0:22,0:21:26.64:0,27,328	0/0:28,0:28:24.04:0,24,279	0/0:20,0:20:48.13:0,48,816	0/0:24,0:24:48.13:0,48,823	0/0:31,0:30:51.15:0,51,861	0/0:10,0:10:30.07:0,30,495
chr10	19345703	.	CTGTG	C	1626.08	PASS	AC=28;AF=0.737;AN=38;BaseQRankSum=3.382;DP=654;FS=3.626;HRun=0;HaplotypeScore=114.2266;InbreedingCoeff=0.5190;MQ=65.28;MQ0=14;MQRankSum=-2.496;QD=4.71;ReadPosRankSum=0.841;VQSLOD=1.9350;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:39.09:0,39,566	./.	./.	./.	1/1:25,0:27:3:28,3,0	./.	1/1:22,2:28:9.86:118,10,0	./.	0/0:27,0:27:12.04:0,12,186	1/1:29,1:30:3.36:68,3,0	1/1:16,1:18:6.01:74,6,0	./.	1/1:22,4:27:15.04:203,15,0	0/0:17,2:19:0:0,0,0	1/1:20,1:21:6.01:74,6,0	1/1:24,2:26:11.41:182,11,0	1/1:20,6:25:26.79:367,27,0	1/1:17,4:21:3.01:46,3,0	0/0:31,0:30:5.51:0,6,62	1/1:17,0:20:1.69:26,2,0	0/0:26,0:25:0.47:0,0,1	1/1:18,4:22:12.03:166,12,0	1/1:11,1:13:3.01:46,3,0	1/1:30,12:41:21.07:322,21,0	./.	./.	1/1:18,0:19:2.96:27,3,0	./.
chr10	19347221	.	TTG	T	271.18	PASS	AB=0.973;AC=21;AF=0.438;AN=48;BaseQRankSum=-4.298;DP=698;FS=2.099;HRun=0;HaplotypeScore=171.6258;InbreedingCoeff=0.2752;MQ=61.56;MQ0=12;MQRankSum=2.307;QD=0.87;ReadPosRankSum=4.280;VQSLOD=2.6863;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:1.24:0,1,3	0/0:6,0:6:3.99:0,4,15	./.	./.	1/1:17,0:16:3.78:34,4,0	0/0:32,0:31:18.14:0,18,92	0/0:28,0:28:5.18:0,5,15	./.	0/0:41,0:41:0.78:0,1,118	0/1:24,0:23:7.47:12,0,7	1/1:18,0:18:2.84:14,3,0	0/0:26,0:26:15.84:0,16,120	0/0:34,0:34:7.33:0,7,87	0/1:25,0:27:16.02:16,0,35	1/1:28,0:28:20.35:168,20,0	0/0:22,0:21:5.93:0,6,41	./.	1/1:20,0:20:2.74:12,3,0	0/1:19,0:19:6.95:23,0,7	0/0:25,0:24:2.99:0,3,24	1/1:42,1:41:3.01:32,3,0	0/1:24,0:24:2.39:7,0,2	0/0:12,0:13:3.45:0,3,8	1/1:30,2:33:5.93:41,6,0	1/1:17,4:21:0.53:32,1,0	0/0:32,0:30:17.82:0,18,134	1/1:22,0:22:2.88:15,3,0	0/1:13,0:13:7.24:7,0,15
chr10	19347260	.	T	TATGAGA	8763.74	PASS	AB=0.670;AC=25;AF=0.446;AN=56;BaseQRankSum=-1.555;DP=787;FS=67.121;HRun=0;HaplotypeScore=204.4834;InbreedingCoeff=-0.3523;MQ=47.69;MQ0=22;MQRankSum=-1.054;QD=15.03;ReadPosRankSum=7.142;VQSLOD=1.3169;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:9,20:28:6.96:0,7,141	1/1:2,5:7:0.45:54,0,0	0/0:22,0:11:25.68:0,26,446	0/0:29,0:14:39.13:0,39,904	0/0:6,13:19:5.68:0,6,41	0/1:13,16:35:52.66:332,0,53	1/1:2,25:31:3.65:23,4,0	1/1:35,0:33:60.98:1617,61,0	0/1:20,0:44:99:127,0,353	0/1:7,1:21:99:732,0,151	1/1:6,0:19:6.95:27,7,0	0/1:5,0:32:51.14:349,0,51	0/1:9,0:30:46.50:387,0,47	0/1:12,16:34:85.26:85,0,120	0/1:29,0:30:99:316,0,238	0/1:4,0:30:39.23:152,0,39	0/1:4,14:21:58.86:79,0,59	0/1:20,1:20:97.47:724,0,97	0/1:5,0:19:43.13:846,0,43	0/1:7,0:24:80.48:80,0,138	0/0:19,0:55:12.76:0,13,134	0/0:9,12:24:5.61:0,6,72	0/0:9,10:22:9.92:0,10,93	0/1:37,1:36:99:649,0,133	0/1:29,2:32:99:623,0,235	0/1:16,16:34:99:1335,0,256	0/1:2,0:19:75.76:76,0,88	0/1:5,0:13:99:149,0,227
chr10	19347369	.	T	TGA	5612.15	PASS	AB=0.849;AC=38;AF=0.731;AN=52;BaseQRankSum=-0.173;DP=767;FS=7.789;HRun=0;HaplotypeScore=151.9056;InbreedingCoeff=-0.2514;MQ=57.86;MQ0=11;MQRankSum=-0.392;QD=8.16;ReadPosRankSum=0.831;VQSLOD=4.2166;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:19:8.99:73,9,0	1/1:14,0:14:14.97:126,15,0	./.	./.	0/1:23,0:23:9.07:145,0,9	0/1:32,4:35:14.49:269,0,14	0/1:19,8:28:14.96:204,0,15	0/1:23,0:23:22.87:33,0,23	1/1:22,0:23:15.65:140,16,0	1/1:23,8:34:34.06:411,34,0	0/1:23,5:29:21.41:123,0,21	1/1:18,9:28:0.58:401,1,0	1/1:39,6:45:38.96:486,39,0	1/1:16,7:22:21.05:309,21,0	1/1:20,0:21:2.97:26,3,0	0/1:14,9:23:5.98:332,0,6	0/1:11,4:15:49.80:108,0,50	0/1:15,3:18:28.52:190,0,29	0/0:11,0:9:2.97:0,3,21	0/1:25,5:30:29.09:162,0,29	0/1:39,6:46:87.13:283,0,87	0/1:25,3:28:99:221,0,99	1/1:15,13:28:15.01:225,15,0	0/1:29,25:53:99:293,0,100	1/1:29,0:29:44.86:359,45,0	1/1:34,0:32:44.03:350,44,0	1/1:15,0:15:17.99:162,18,0	1/1:19,0:19:20.94:180,21,0
chr10	19347392	.	G	GAGAA	4043.36	PASS	AB=0.841;AC=13;AF=0.232;AN=56;BaseQRankSum=-3.380;DP=723;FS=13.539;HRun=0;HaplotypeScore=161.5414;InbreedingCoeff=0.6759;MQ=52.91;MQ0=11;MQRankSum=1.809;QD=22.59;ReadPosRankSum=6.340;VQSLOD=2.1370;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:20,0:20:0.01:0,0,151	0/1:1,9:12:3.96:339,0,4	0/0:17,0:4:11.97:0,12,106	0/0:28,0:12:8.09:0,8,116	1/1:2,14:17:16.79:592,17,0	0/0:37,0:36:38.14:0,38,332	0/0:24,0:24:26.30:0,26,254	0/0:28,0:27:66.11:0,66,563	0/0:27,0:27:1.89:0,2,165	0/0:29,0:29:26.48:0,26,350	0/0:27,0:27:41.96:0,42,379	0/0:23,0:23:13.34:0,13,137	0/0:33,0:33:26.63:0,27,176	0/0:24,0:23:21.45:0,21,162	0/1:25,0:25:15.40:15,0,144	0/0:21,0:21:19.32:0,19,179	0/0:14,0:14:19.38:0,19,236	0/0:16,0:16:18.69:0,19,199	0/0:9,0:7:17.97:0,18,164	0/0:34,0:34:59.56:0,60,517	0/0:38,0:36:73.65:0,74,723	0/0:33,0:32:45.82:0,46,496	0/0:32,0:32:50.79:0,51,411	0/0:50,0:47:7.15:0,7,501	1/1:6,28:35:5.83:1056,6,0	1/1:4,26:33:28.35:1192,28,0	1/1:1,10:14:18.04:414,18,0	1/1:2,18:22:20.82:436,21,0
chr10	19347500	.	ATGTGTG	A	5578.99	PASS	AB=0.906;AC=41;AF=0.732;AN=56;BaseQRankSum=1.737;DP=573;FS=3.051;HRun=0;HaplotypeScore=145.2716;InbreedingCoeff=0.4073;MQ=50.25;MQ0=11;MQRankSum=0.518;QD=13.16;ReadPosRankSum=2.470;VQSLOD=4.2591;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:14.76:0,15,362	1/1:3,0:3:1.25:3,1,0	0/0:39,0:10:4.57:0,5,65	0/0:44,0:23:24.33:0,24,384	0/1:19,0:19:26:84,0,26	1/1:17,1:25:42.35:663,42,0	1/1:12,1:14:8.11:130,8,0	1/1:28,1:29:15.49:231,15,0	0/0:26,0:26:46.53:0,47,1052	1/1:18,3:20:47.30:684,47,0	1/1:27,1:29:25.89:391,26,0	1/1:18,1:20:28.61:445,29,0	1/1:18,3:27:46.79:751,47,0	1/1:13,0:14:11.17:178,11,0	0/0:20,0:20:5.23:0,5,49	1/1:12,5:17:6.01:79,6,0	0/1:11,0:11:58.89:166,0,59	0/1:4,1:6:42.97:58,0,43	1/1:10,5:15:15.05:273,15,0	1/1:11,7:18:5.87:37,6,0	1/1:21,1:24:20.53:314,21,0	1/1:15,0:15:12.92:193,13,0	1/1:5,12:17:0.47:1,0,0	0/1:17,1:19:11.05:149,0,11	1/1:23,0:23:5.97:20,6,0	1/1:26,0:26:46.41:446,46,0	1/1:17,0:17:21.25:233,21,0	0/1:6,0:6:49.56:50,0,110
chr10	19347519	.	T	TGAGA	1437.78	PASS	AB=0.940;AC=18;AF=0.321;AN=56;BaseQRankSum=2.409;DP=486;FS=7.529;HRun=0;HaplotypeScore=133.6590;InbreedingCoeff=-0.0914;MQ=42.05;MQ0=32;MQRankSum=-2.573;QD=5.97;ReadPosRankSum=-0.056;VQSLOD=2.1866;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:9.50:0,9,319	0/0:2,0:1:3.01:0,3,42	0/0:28,0:6:10.83:0,11,106	0/0:43,0:13:27.52:0,28,380	0/0:17,0:17:17.30:0,17,202	0/1:20,1:22:54.23:207,0,54	0/1:14,1:12:13.17:27,0,13	0/1:23,0:23:99:121,0,219	0/0:24,0:23:51.15:0,51,1013	1/1:18,0:17:2.28:391,2,0	1/1:17,1:21:18.02:132,18,0	0/1:20,0:18:35.39:43,0,35	0/1:21,1:22:29.40:303,0,29	0/1:7,7:12:12.87:59,0,13	0/1:22,0:22:8.17:8,0,40	1/1:7,0:7:2.23:8,2,0	0/0:9,0:6:6.80:0,7,42	0/1:7,0:7:15.89:16,0,46	0/1:11,0:9:29.19:124,0,29	0/0:15,0:15:2.62:0,3,34	0/1:16,0:15:16.65:71,0,17	0/1:13,0:12:4.10:68,0,4	0/0:15,0:14:0:0,0,0	0/0:19,0:17:6.74:0,7,61	0/0:18,0:18:12.04:0,12,143	0/0:19,0:20:6.09:0,6,389	0/0:12,0:12:28.70:0,29,284	0/1:5,0:5:16.03:16,0,102
chr10	19347521	.	TGTGTGAGA	T	3963.98	PASS	AB=1.000;AC=34;AF=0.607;AN=56;BaseQRankSum=-2.329;DP=464;FS=15.708;HRun=0;HaplotypeScore=130.6742;InbreedingCoeff=-0.0075;MQ=41.71;MQ0=35;MQRankSum=5.958;QD=11.20;ReadPosRankSum=1.057;VQSLOD=1.3818;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:15.04:0,15,243	1/1:2,0:1:3.01:57,3,0	0/0:25,0:4:9.91:0,10,115	0/0:40,0:12:21.13:0,21,282	1/1:15,1:16:23.83:321,24,0	0/1:23,0:22:45.15:211,0,45	0/1:15,0:12:11.82:25,0,12	0/1:22,0:22:41.66:42,0,256	0/0:24,0:23:45.65:0,46,720	0/1:20,0:17:0.87:172,0,1	1/1:20,0:20:25.70:213,26,0	1/1:19,0:17:7.43:207,7,0	0/1:21,0:21:52.16:283,0,52	0/1:14,0:12:20.98:46,0,21	0/1:22,0:22:17:17,0,33	1/1:7,0:7:5.87:41,6,0	0/1:9,0:6:35.12:103,0,35	0/1:8,0:7:34.15:34,0,34	1/1:8,0:6:9.55:154,10,0	0/1:13,0:12:5.43:5,0,9	1/1:17,0:15:14.30:148,14,0	0/1:11,0:10:31.90:56,0,32	0/1:14,0:13:0:0,0,0	0/1:18,0:16:52.01:60,0,52	1/1:0,18:18:11.68:228,12,0	1/1:4,15:19:47.59:967,48,0	1/1:9,3:11:30.10:544,30,0	0/1:5,0:5:29.87:30,0,53
chr10	19347525	.	TGAGA	T	717.68	PASS	AB=1.000;AC=15;AF=0.278;AN=54;BaseQRankSum=-1.897;DP=454;FS=0.000;HRun=0;HaplotypeScore=122.9974;InbreedingCoeff=0.5270;MQ=40.63;MQ0=40;MQRankSum=1.957;QD=6.35;ReadPosRankSum=1.294;VQSLOD=2.0543;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:11,8:18:4.38:54,4,0	1/1:3,0:1:2.37:8,2,0	0/0:22,0:3:6.02:0,6,73	0/0:35,0:7:6.02:0,6,96	1/1:12,0:11:3.01:35,3,0	0/0:24,0:22:33.23:0,33,220	0/0:16,0:12:7.81:0,8,37	0/0:25,0:25:51.78:0,52,555	0/1:22,0:21:20.49:272,0,20	0/0:17,0:15:30.38:0,30,193	0/0:20,0:20:10.20:0,10,61	0/0:19,0:18:16.10:0,16,90	0/0:21,0:21:32.37:0,32,220	0/0:14,0:12:5.51:0,6,16	0/0:20,0:20:5.14:0,5,24	1/1:9,0:9:1.88:7,2,0	0/0:9,0:6:0.47:0,0,1	0/0:8,0:7:3.01:0,3,31	0/0:8,0:6:4.25:0,4,30	0/0:15,0:14:1.64:0,2,26	0/0:21,0:18:8.57:0,9,79	0/0:10,0:9:8.60:0,9,102	./.	0/0:18,0:16:11.96:0,12,139	1/1:18,0:18:11.06:105,11,0	1/1:17,0:18:10.99:249,11,0	1/1:12,0:11:14.35:141,14,0	0/0:4,0:4:2.13:0,2,5
chr10	19347559	.	GGA	G	228.82	PASS	AB=0.933;AC=16;AF=0.381;AN=42;BaseQRankSum=1.660;DP=420;FS=1.027;HRun=0;HaplotypeScore=94.4590;InbreedingCoeff=0.0540;MQ=31.67;MQ0=45;MQRankSum=-1.870;QD=1.19;ReadPosRankSum=1.179;VQSLOD=1.7928;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:17,0:16:3.03:3,0,15	./.	./.	./.	./.	0/1:22,1:21:22.30:26,0,22	0/1:18,0:12:0:0,0,0	0/0:31,0:28:5.65:0,6,32	1/1:10,0:13:11.25:59,11,0	0/0:18,0:18:12.80:0,13,98	1/1:14,1:13:3:33,3,0	0/0:12,0:11:2.92:0,3,18	0/1:18,1:19:16.82:17,0,161	0/1:12,1:12:17.57:18,0,138	0/0:21,0:21:0.86:0,1,9	0/0:14,0:13:12.88:0,13,104	0/1:10,1:8:7.37:34,0,7	0/1:10,1:10:48.58:49,0,90	1/1:17,0:15:8.84:59,9,0	1/1:17,1:15:2.87:32,3,0	0/0:23,0:17:2.04:0,2,6	0/0:14,0:12:6.02:0,6,85	./.	0/0:18,0:15:12.31:0,12,124	./.	0/1:13,0:15:29.55:30,0,40	./.	0/0:8,0:6:2.97:0,3,20
chr10	19347606	.	A	ATG	1044.94	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=-5.438;DP=666;FS=18.118;HRun=0;HaplotypeScore=124.3281;InbreedingCoeff=0.7304;MQ=54.75;MQ0=7;MQRankSum=-0.834;QD=14.93;ReadPosRankSum=-1.476;VQSLOD=2.2936;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:34:57.09:0,57,700	0/0:9,0:9:21.07:0,21,267	0/0:21,0:20:53.87:0,54,607	0/0:28,0:24:63.13:0,63,740	0/0:16,0:16:39:0,39,431	0/0:29,0:26:66.08:0,66,761	0/0:20,0:19:42.58:0,43,504	1/1:18,23:41:72.18:1139,72,0	0/0:24,0:24:55.88:0,56,647	0/0:33,0:33:90.27:0,90,1121	0/0:22,0:22:60.11:0,60,721	0/0:27,0:27:65.64:0,66,775	0/0:28,0:27:69.17:0,69,800	0/0:26,0:26:62.77:0,63,751	0/0:26,0:26:63.20:0,63,787	0/0:22,0:22:50.92:0,51,606	0/0:14,0:13:30.04:0,30,361	0/0:12,0:12:26.60:0,27,297	0/0:22,0:22:54.17:0,54,687	0/0:33,0:31:78.17:0,78,945	0/0:31,0:30:69.69:0,70,874	0/0:24,0:23:54.14:0,54,654	0/0:15,0:15:33.56:0,34,402	0/1:29,0:26:3.24:3,0,448	0/0:15,0:15:39.10:0,39,475	0/0:36,0:35:91.32:0,91,1106	0/0:12,0:11:33.02:0,33,385	0/0:16,0:16:37.91:0,38,393
chr10	19347824	.	GGA	G	443.77	PASS	AB=0.910;AC=8;AF=0.143;AN=56;BaseQRankSum=4.711;DP=755;FS=0.648;HRun=0;HaplotypeScore=117.9233;InbreedingCoeff=0.0565;MQ=68.24;MQ0=10;MQRankSum=0.897;QD=2.34;ReadPosRankSum=-0.733;VQSLOD=1.6060;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:5.48:0,5,60	0/0:7,0:7:2.96:0,3,19	0/0:37,0:24:30.30:0,30,378	0/0:45,0:30:3.23:0,3,193	0/0:33,0:32:13.96:0,14,113	0/1:30,2:31:28.42:28,0,673	0/0:18,2:20:0.78:0,1,454	1/1:17,12:30:38.91:414,39,0	0/0:22,0:22:14.91:0,15,124	0/0:33,1:33:4.85:0,5,752	0/0:38,1:39:39.91:0,40,1077	0/0:27,0:27:29.67:0,30,763	0/1:35,5:40:30.71:31,0,956	0/0:35,2:37:39.90:0,40,1074	0/0:11,0:28:35.99:0,36,330	0/1:30,2:32:5.64:6,0,790	0/0:14,0:14:27.09:0,27,426	0/1:14,2:16:40.55:41,0,328	0/1:14,1:15:5.23:5,0,378	0/0:30,2:30:21.86:0,22,786	0/1:21,3:24:51.83:52,0,567	0/0:23,1:24:9.70:0,10,520	0/0:26,0:26:48.14:0,48,713	0/0:22,0:22:48.62:0,49,734	0/0:21,0:21:11.94:0,12,98	0/0:35,0:31:54.09:0,54,467	0/0:31,0:30:26.91:0,27,223	0/0:10,0:9:23.95:0,24,203
chr10	19350526	.	G	GAA	9957.08	PASS	AB=0.736;AC=51;AF=0.911;AN=56;BaseQRankSum=-1.260;DP=540;FS=1.304;HRun=10;HaplotypeScore=73.8927;InbreedingCoeff=0.3286;MQ=70.51;MQ0=1;MQRankSum=-0.954;QD=18.72;ReadPosRankSum=0.073;VQSLOD=3.6484;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,0:27:44.92:158,45,0	1/1:3,0:11:19.84:70,20,0	0/1:4,0:4:0:0,0,0	0/0:8,0:8:2.98:0,3,30	0/1:7,1:27:35.51:147,0,36	1/1:1,14:17:35.60:484,36,0	1/1:2,11:15:30.09:432,30,0	1/1:10,0:31:25.39:169,25,0	1/1:2,0:11:17.47:61,17,0	1/1:7,20:28:62.65:838,63,0	1/1:1,7:11:26.01:290,26,0	1/1:2,20:27:52.62:660,53,0	1/1:7,10:19:35.01:437,35,0	1/1:2,16:20:41.62:575,42,0	1/1:1,13:14:27.09:403,27,0	1/1:2,16:19:38.62:545,39,0	1/1:3,27:30:69.23:1029,69,0	1/1:4,16:24:47.12:611,47,0	1/1:3,14:18:39.13:581,39,0	1/1:4,11:17:34.33:383,34,0	1/1:1,9:11:24.07:341,24,0	1/1:6,10:16:30.57:449,31,0	1/1:2,13:16:15.94:225,16,0	1/1:6,20:27:50.66:724,51,0	1/1:3,0:22:2.44:75,2,0	0/1:13,0:31:14.42:110,0,14	1/1:4,0:25:13.81:99,14,0	1/1:3,0:13:17.47:61,17,0
chr10	19351720	.	G	GA	369.80	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-3.464;DP=626;FS=1.985;HRun=9;HaplotypeScore=69.8067;InbreedingCoeff=0.9880;MQ=84.03;MQ0=0;MQRankSum=-2.484;QD=20.54;ReadPosRankSum=0.522;VQSLOD=4.2047;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,1:45:75.09:0,75,954	0/0:10,0:10:20.98:0,21,182	0/0:20,0:21:38.41:0,38,310	0/0:19,0:18:27.76:0,28,258	0/0:16,0:16:34.70:0,35,291	0/0:28,0:28:74.96:0,75,647	0/0:24,0:24:59.96:0,60,521	0/0:31,0:31:77.10:0,77,673	0/0:21,0:22:50:0,50,423	0/0:22,0:22:38.96:0,39,339	0/0:17,0:17:32.95:0,33,286	0/0:25,0:25:56.95:0,57,489	0/0:31,0:31:80.97:0,81,703	0/0:24,0:24:56.95:0,57,495	1/1:2,16:18:42.11:465,42,0	0/0:31,0:31:80.92:0,81,695	0/0:22,0:22:59.95:0,60,512	0/0:18,0:19:52.06:0,52,429	0/0:37,0:37:83.96:0,84,728	0/0:11,0:11:20.97:0,21,182	0/0:29,0:29:65.96:0,66,573	0/0:18,0:18:44.96:0,45,386	0/0:17,0:17:41.97:0,42,364	0/0:23,0:23:59.98:0,60,521	0/0:13,0:13:29.83:0,30,260	0/0:19,0:19:44.96:0,45,391	0/0:20,0:20:27.39:0,27,393	0/0:12,0:12:27.88:0,28,236
chr10	19351895	.	C	CA	14546.38	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=-15.223;DP=622;FS=3.890;HRun=1;HaplotypeScore=55.4752;InbreedingCoeff=0.9998;MQ=86.34;MQ0=0;MQRankSum=-3.583;QD=41.56;ReadPosRankSum=3.757;VQSLOD=5.3500;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,102,1308	0/0:9,0:9:27.09:0,27,350	0/0:17,0:17:45.11:0,45,530	0/0:23,0:23:69.15:0,69,811	0/0:21,0:21:63.20:0,63,817	1/1:0,26:26:75.25:1124,75,0	1/1:1,20:21:54.18:809,54,0	0/0:26,0:26:75.24:0,75,974	0/0:19,0:19:57.17:0,57,726	1/1:0,25:25:72.24:1080,72,0	1/1:1,14:15:42.14:622,42,0	1/1:0,17:17:51.17:764,51,0	1/1:1,26:27:78.26:1166,78,0	1/1:0,23:23:63.21:944,63,0	0/0:24,0:24:72.23:0,72,935	1/1:0,21:21:63.21:944,63,0	1/1:0,38:38:99:1574,105,0	1/1:1,22:23:57.19:854,57,0	1/1:1,13:14:42.11:589,42,0	1/1:1,14:15:39.13:584,39,0	1/1:1,28:29:81.27:1214,81,0	1/1:0,15:15:42.14:630,42,0	1/1:1,16:17:45.15:657,45,0	1/1:0,24:24:66.22:989,66,0	0/0:27,0:27:81.26:0,81,1051	0/0:23,0:23:69.21:0,69,882	0/0:31,0:30:90.29:0,90,1166	0/0:16,0:16:48.16:0,48,621
chr10	19352298	.	TC	T	4451.09	PASS	AB=1.000;AC=43;AF=0.768;AN=56;BaseQRankSum=-4.489;DP=375;FS=39.981;HRun=7;HaplotypeScore=60.9218;InbreedingCoeff=0.4173;MQ=80.86;MQ0=1;MQRankSum=-1.024;QD=13.21;ReadPosRankSum=1.521;VQSLOD=1.8949;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:21,3:24:33.93:347,34,0	0/0:4,0:4:0:0,0,0	0/1:31,0:18:25.23:25,0,203	0/0:14,0:8:9.02:0,9,102	1/1:6,0:6:0.81:2,1,0	1/1:14,1:15:24.47:261,24,0	1/1:17,0:17:13.28:223,13,0	1/1:8,14:22:39.02:368,39,0	1/1:4,4:8:14.92:133,15,0	1/1:9,0:9:11.59:89,12,0	1/1:11,2:13:17.97:234,18,0	1/1:16,1:17:22.90:331,23,0	1/1:10,1:11:0.08:130,0,0	1/1:21,3:24:43.96:419,44,0	1/1:17,1:18:13.10:209,13,0	1/1:16,0:16:28.38:225,28,0	1/1:13,1:14:23.16:230,23,0	0/1:10,0:10:34.11:77,0,34	1/1:10,1:11:17.71:161,18,0	1/1:0,8:8:20.96:196,21,0	1/1:11,1:12:20.93:180,21,0	1/1:8,0:8:11.66:156,12,0	1/1:6,1:7:11.81:98,12,0	1/1:23,1:24:17.07:346,17,0	0/1:12,0:12:10.69:11,0,32	0/0:10,0:10:8.65:0,9,42	0/0:9,0:9:0.19:0,0,7	0/0:1,0:1:0:0,0,0
chr10	19352304	.	C	CT	1652.62	PASS	AB=0.963;AC=27;AF=0.482;AN=56;BaseQRankSum=-3.762;DP=365;FS=69.290;HRun=0;HaplotypeScore=73.8158;InbreedingCoeff=0.0118;MQ=76.80;MQ0=1;MQRankSum=-0.692;QD=5.90;ReadPosRankSum=0.509;VQSLOD=0.6248;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:15,1:16:24.68:313,25,0	0/0:3,0:3:5.99:0,6,49	0/0:34,0:20:34.30:0,34,367	0/0:13,0:6:11.99:0,12,130	0/0:4,0:4:8.86:0,9,62	0/1:17,0:17:20.37:35,0,20	0/1:18,1:19:30.85:107,0,31	1/1:18,1:19:33.42:198,33,0	1/1:9,0:9:13.35:56,13,0	1/1:4,0:4:9.38:63,9,0	0/1:14,0:14:24.65:25,0,33	0/1:17,2:19:32.35:143,0,32	0/1:8,1:9:19.82:85,0,20	0/1:24,0:24:32.47:92,0,32	0/1:13,6:19:14.04:243,0,14	0/1:16,0:16:22.99:94,0,23	0/1:16,0:16:49.22:49,0,55	0/1:10,0:10:4.24:4,0,63	0/1:8,0:8:8.94:26,0,9	1/1:8,0:8:6.18:44,6,0	1/1:8,2:10:12.31:91,12,0	0/1:8,0:8:12.85:13,0,22	1/1:7,0:7:6.56:25,7,0	0/1:28,0:28:99:128,0,99	0/0:10,0:10:19.86:0,20,141	0/0:10,0:10:19.23:0,19,163	0/0:10,0:10:17.58:0,18,140	0/0:1,0:1:2.99:0,3,24
chr10	19352305	.	CT	C	2928.47	PASS	AB=0.927;AC=54;AF=0.964;AN=56;BaseQRankSum=-2.665;DP=366;FS=3.490;HRun=1;HaplotypeScore=68.5894;InbreedingCoeff=0.1259;MQ=79.90;MQ0=1;MQRankSum=-2.470;QD=8.00;ReadPosRankSum=2.528;VQSLOD=1.1943;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:15:40.13:225,40,0	1/1:3,0:3:8.37:60,8,0	0/1:34,3:23:25.40:25,0,244	0/1:11,1:6:3.04:3,0,78	1/1:4,0:4:8.98:74,9,0	1/1:16,1:17:32.17:160,32,0	1/1:18,1:19:34.35:177,34,0	1/1:19,0:19:26.97:110,27,0	1/1:9,0:9:13.25:54,13,0	1/1:4,0:4:11.05:60,11,0	1/1:16,0:16:2.72:70,3,0	1/1:19,0:19:45.49:234,45,0	1/1:8,0:8:18.01:86,18,0	1/1:24,0:24:41.90:175,42,0	1/1:18,0:18:31.53:200,32,0	1/1:15,1:16:23.13:116,23,0	1/1:15,1:16:35.46:156,35,0	1/1:10,0:10:15.95:61,16,0	1/1:8,0:8:15.21:70,15,0	1/1:8,0:8:17.17:65,17,0	1/1:10,0:10:18.71:105,19,0	1/1:8,1:9:18.91:102,19,0	1/1:7,0:7:11.47:41,11,0	1/1:24,2:26:15.02:150,15,0	1/1:10,0:10:14.94:127,15,0	1/1:10,0:10:13.44:111,13,0	1/1:8,2:10:23.82:187,24,0	1/1:1,0:1:3:25,3,0
chr10	19352348	.	TAA	T	5291.42	PASS	AB=0.529;AC=36;AF=0.643;AN=56;BaseQRankSum=-8.434;DP=414;FS=11.337;HRun=13;HaplotypeScore=70.2122;InbreedingCoeff=0.7435;MQ=76.05;MQ0=1;MQRankSum=-1.307;QD=17.76;ReadPosRankSum=0.885;VQSLOD=2.8318;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:22:22.93:0,23,174	0/0:0,0:1:2.50:0,2,9	0/0:17,0:14:14.91:0,15,194	0/0:11,1:13:4.66:0,5,177	0/1:1,4:22:67.78:68,0,73	1/1:5,7:12:17.96:175,18,0	1/1:2,15:19:44.28:399,44,0	1/1:4,9:13:20.93:253,21,0	0/1:2,1:12:18.78:19,0,71	1/1:2,14:17:32.95:362,33,0	1/1:4,12:16:31.69:312,32,0	1/1:0,12:13:29.98:341,30,0	1/1:2,10:12:18.02:175,18,0	1/1:6,15:20:33.01:320,33,0	0/0:6,0:11:26.49:0,26,291	1/1:4,12:16:33.01:320,33,0	1/1:5,20:27:50.71:543,51,0	1/1:1,11:12:27.03:262,27,0	1/1:5,5:10:14.94:137,15,0	1/1:0,19:20:50.74:477,51,0	1/1:4,9:13:24:233,24,0	1/1:1,7:8:14.99:145,15,0	1/1:2,10:14:32.50:285,33,0	1/1:4,17:21:48.03:465,48,0	0/0:0,0:10:19.96:0,20,69	0/0:3,1:20:12.44:0,12,101	0/0:0,1:18:5.98:0,6,82	0/0:2,0:4:5.51:0,6,52
chr10	19352698	.	T	TC	13326.74	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=-15.410;DP=617;FS=2.654;HRun=3;HaplotypeScore=55.4023;InbreedingCoeff=0.9953;MQ=89.01;MQ0=0;MQRankSum=-2.146;QD=36.21;ReadPosRankSum=3.841;VQSLOD=5.3688;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:93.28:0,93,1114	0/0:4,0:4:12.04:0,12,144	0/0:28,0:28:78.19:0,78,905	0/0:18,0:18:50.45:0,50,562	0/0:22,0:22:54.16:0,54,647	1/1:2,23:25:60.03:807,60,0	1/1:1,15:16:36.12:504,36,0	0/0:28,0:28:78.21:0,78,906	0/0:16,0:16:45.13:0,45,527	1/1:3,21:24:63.20:866,63,0	1/1:1,21:22:60.20:839,60,0	1/1:1,19:20:57.19:784,57,0	1/1:0,16:16:48.16:671,48,0	1/1:2,24:26:66.22:922,66,0	0/0:24,0:24:72.22:0,72,864	1/1:3,18:21:45.15:630,45,0	1/1:1,32:33:84.28:1176,84,0	1/1:0,26:26:66.22:924,66,0	1/1:4,28:32:87.29:1217,87,0	1/1:0,17:17:48.16:672,48,0	1/1:1,31:32:84.28:1176,84,0	1/1:2,17:19:51.17:713,51,0	1/1:0,15:15:36.12:503,36,0	1/1:2,22:24:66.22:924,66,0	0/0:18,0:18:51.16:0,51,612	0/0:30,1:31:32.59:0,33,794	0/0:17,0:17:48.15:0,48,575	0/0:8,0:8:24.05:0,24,274
chr10	19353237	.	CT	C	9176.59	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=15.320;DP=717;FS=10.021;HRun=9;HaplotypeScore=68.4991;InbreedingCoeff=0.9956;MQ=76.82;MQ0=0;MQRankSum=-1.640;QD=22.27;ReadPosRankSum=2.031;VQSLOD=5.4546;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,117,1340	0/0:7,0:7:18.05:0,18,208	0/0:27,0:24:54.02:0,54,595	0/0:17,0:17:29.23:0,29,340	0/0:30,0:30:84.25:0,84,969	1/1:1,21:22:48.02:439,48,0	1/1:3,16:19:13.41:377,13,0	0/0:34,0:34:84.23:0,84,951	0/0:29,0:29:78.23:0,78,900	1/1:6,34:40:99:928,102,0	1/1:4,26:30:78.04:714,78,0	1/1:4,28:32:72.03:659,72,0	1/1:2,30:32:75.04:686,75,0	1/1:4,16:20:48.01:439,48,0	0/0:20,0:21:57:0,57,638	1/1:3,24:27:60.02:549,60,0	1/1:2,14:16:39.02:357,39,0	1/1:0,25:25:69.04:631,69,0	1/1:8,15:23:44.81:404,45,0	1/1:1,20:21:54.02:494,54,0	1/1:2,17:19:48.01:439,48,0	1/1:3,27:30:78.03:713,78,0	1/1:0,27:27:78.04:714,78,0	1/1:2,27:29:69.03:632,69,0	0/0:22,0:24:47.97:0,48,534	0/0:29,2:31:35.67:0,36,907	0/0:29,0:28:87.25:0,87,995	0/0:12,0:12:36.11:0,36,415
chr10	19354981	.	AT	A	11107.65	PASS	AB=0.739;AC=52;AF=0.929;AN=56;BaseQRankSum=2.235;DP=543;FS=12.374;HRun=10;HaplotypeScore=81.6509;InbreedingCoeff=0.5120;MQ=67.03;MQ0=0;MQRankSum=-5.025;QD=20.88;ReadPosRankSum=2.841;VQSLOD=4.9794;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,31:37:84.97:774,85,0	1/1:1,5:6:15:130,15,0	0/0:11,0:8:21.06:0,21,232	0/1:7,1:8:8.01:8,0,148	1/1:3,20:23:56.92:483,57,0	1/1:2,21:23:56.97:495,57,0	1/1:3,17:20:47.99:417,48,0	1/1:2,24:26:71.97:621,72,0	1/1:3,13:16:32.99:287,33,0	1/1:5,19:24:53.93:462,54,0	1/1:3,21:24:56.98:495,57,0	1/1:2,11:13:26.99:234,27,0	1/1:1,11:12:26.98:234,27,0	1/1:1,16:17:38.99:339,39,0	1/1:2,24:26:68.97:599,69,0	1/1:1,18:19:50.99:443,51,0	1/1:0,19:19:41.99:365,42,0	1/1:1,14:15:36.88:315,37,0	1/1:3,20:23:59.92:510,60,0	1/1:2,28:30:83.90:721,84,0	1/1:4,14:18:38.98:339,39,0	0/1:3,7:10:9.19:158,0,9	1/1:2,23:25:68.98:599,69,0	1/1:0,8:8:24:208,24,0	1/1:2,29:31:77.97:677,78,0	1/1:3,22:25:62.97:544,63,0	1/1:2,23:25:62.98:547,63,0	1/1:5,4:9:11.99:104,12,0
chr10	19356679	.	A	AAAAGAAAGAAAGAAAG	2983.47	PASS	AB=0.839;AC=3;AF=0.054;AN=56;BaseQRankSum=-3.510;DP=625;FS=0.000;HRun=0;HaplotypeScore=298.0543;InbreedingCoeff=0.5963;MQ=67.47;MQ0=2;MQRankSum=-6.297;QD=56.29;ReadPosRankSum=-3.368;VQSLOD=1.8401;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:48.16:0,48,2104	0/0:6,0:6:15.05:0,15,656	0/0:17,0:14:9.03:0,9,256	0/0:18,0:15:11.13:0,11,450	0/0:22,0:22:42.13:0,42,1694	0/0:27,0:27:75.26:0,75,2941	0/0:23,0:23:54.14:0,54,2231	0/1:21,0:26:94.40:115,0,94	0/0:14,0:14:33.10:0,33,1243	0/0:22,0:22:45.15:0,45,1887	0/0:26,0:26:63.22:0,63,2671	0/0:21,0:21:42.13:0,42,1689	0/0:24,0:24:60.19:0,60,2313	0/0:20,0:20:45.10:0,45,1568	1/1:17,8:27:45.15:2974,45,0	0/0:24,0:24:57.20:0,57,2505	0/0:20,0:20:48.12:0,48,1918	0/0:13,0:13:27.09:0,27,1158	0/0:31,0:31:69.20:0,69,2534	0/0:33,0:33:60.18:0,60,2306	0/0:20,0:20:45.15:0,45,1817	0/0:31,0:31:78.26:0,78,2909	0/0:30,0:30:66.22:0,66,2681	0/0:18,0:18:42.14:0,42,1777	0/0:22,0:22:42.14:0,42,1840	0/0:35,0:35:87.28:0,87,3613	0/0:24,0:24:48.16:0,48,1998	0/0:12,0:12:19.11:0,19,1093
chr10	19356821	.	TACACACACAC	T	14304.93	PASS	AB=0.972;AC=35;AF=0.625;AN=56;BaseQRankSum=-1.338;DP=947;FS=3.319;HRun=0;HaplotypeScore=293.0003;InbreedingCoeff=0.8986;MQ=45.17;MQ0=29;MQRankSum=-8.382;QD=27.46;ReadPosRankSum=2.309;VQSLOD=4.0381;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:37:48.62:0,49,1527	0/0:4,0:12:18.06:0,18,648	0/0:103,0:29:63.17:0,63,1875	0/0:102,0:34:81.19:0,81,2246	0/0:7,0:21:33.02:0,33,1287	1/1:12,17:30:17.89:704,18,0	1/1:5,17:22:23.43:683,23,0	1/1:20,21:41:63.14:1530,63,0	0/0:6,0:23:48.10:0,48,1792	1/1:10,16:25:48.13:1261,48,0	1/1:5,16:21:20.87:468,21,0	1/1:6,21:28:38.83:1127,39,0	1/1:12,29:42:66.23:1980,66,0	1/1:13,29:42:56.93:1713,57,0	0/0:18,0:61:99:0,105,1707	1/1:4,24:28:39.13:1114,39,0	1/1:9,13:22:24.08:625,24,0	1/1:4,3:7:2.84:92,3,0	1/1:16,12:27:36.12:996,36,0	1/1:4,16:21:28.92:675,29,0	1/1:31,27:58:4.14:86,4,0	1/1:10,19:29:36.02:750,36,0	1/1:8,8:16:20.64:282,21,0	1/1:11,14:25:8.92:217,9,0	0/0:9,0:21:45.15:0,45,1671	0/1:18,1:35:1:1,0,2770	0/0:6,0:25:38.72:0,39,1345	0/0:6,0:12:21.07:0,21,775
chr10	19358888	.	A	ACAGTG	36208.03	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=0.097;DP=559;FS=1.346;HRun=0;HaplotypeScore=148.1394;InbreedingCoeff=0.9752;MQ=76.71;MQ0=0;MQRankSum=-10.032;QD=69.90;ReadPosRankSum=5.100;VQSLOD=5.8817;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:33,0:33:65.03:1158,65,0	1/1:5,0:5:15.05:400,15,0	0/0:20,0:20:47.72:0,48,781	0/0:21,0:21:46.63:0,47,1174	1/1:22,0:22:51.16:1494,51,0	1/1:21,0:21:60.19:1736,60,0	1/1:23,0:23:66.21:1915,66,0	1/1:22,0:22:34.67:958,35,0	1/1:17,0:17:45.15:900,45,0	1/1:19,0:19:51.12:1279,51,0	1/1:19,0:19:39.11:1014,39,0	1/1:28,0:28:84.27:2440,84,0	1/1:22,0:22:66.21:1873,66,0	1/1:21,0:21:60.17:1581,60,0	1/1:28,0:28:84.27:2371,84,0	1/1:26,0:26:75.26:2212,75,0	1/1:14,0:14:27.07:763,27,0	1/1:12,0:12:33.10:946,33,0	1/1:14,0:14:36.10:951,36,0	1/1:27,0:27:72.18:1977,72,0	1/1:21,0:21:48.16:1421,48,0	1/1:24,0:24:63.20:1817,63,0	1/1:18,0:19:42.13:1225,42,0	1/1:17,0:17:33.06:857,33,0	1/1:24,0:24:66.22:1888,66,0	1/1:20,0:20:60.19:1727,60,0	1/1:10,4:15:30.09:935,30,0	1/1:4,0:4:12.04:370,12,0
chr10	19358889	.	C	CA	7200.31	PASS	AB=0.604;AC=44;AF=0.786;AN=56;BaseQRankSum=9.588;DP=553;FS=8.475;HRun=2;HaplotypeScore=203.2473;InbreedingCoeff=0.7809;MQ=79.09;MQ0=0;MQRankSum=-8.938;QD=16.25;ReadPosRankSum=8.454;VQSLOD=3.8269;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:59.92:0,60,302	1/1:2,3:5:14.88:107,15,0	0/0:21,0:21:22.16:0,22,551	0/0:22,0:23:52.86:0,53,790	1/1:4,19:23:48.04:342,48,0	1/1:5,16:21:37.64:346,38,0	1/1:2,21:23:54.70:442,55,0	0/0:22,0:22:54.18:0,54,427	0/0:15,1:16:13.12:0,13,111	1/1:9,10:19:32.99:268,33,0	1/1:9,11:20:12.79:196,13,0	1/1:4,24:29:66.93:571,67,0	1/1:3,19:22:57.38:446,57,0	1/1:5,15:20:28.25:329,28,0	1/1:6,22:28:47.10:484,47,0	1/1:6,20:26:20.98:396,21,0	0/1:6,8:14:56.95:143,0,57	1/1:2,10:12:19.22:222,19,0	1/1:4,9:13:4.10:206,4,0	1/1:8,20:28:34.08:455,34,0	1/1:5,16:21:42.17:308,42,0	0/1:6,18:24:0.93:339,0,1	1/1:4,13:18:28.18:259,28,0	1/1:3,14:17:22.68:234,23,0	1/1:5,19:24:56.78:441,57,0	1/1:5,15:20:25.11:358,25,0	1/1:3,9:11:29.67:213,30,0	1/1:0,4:4:11.97:95,12,0
chr10	19358890	.	G	GTGCC	26556.07	PASS	AB=0.647;AC=48;AF=0.857;AN=56;BaseQRankSum=3.491;DP=627;FS=5.236;HRun=0;HaplotypeScore=201.2183;InbreedingCoeff=0.4491;MQ=74.55;MQ0=0;MQRankSum=-11.199;QD=45.47;ReadPosRankSum=9.135;VQSLOD=4.0239;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,0:31:68.53:1169,69,0	1/1:5,3:8:20.66:375,21,0	0/0:20,0:20:50.15:0,50,873	0/0:23,0:23:60.53:0,61,1199	1/1:7,19:26:33.18:1029,33,0	1/1:9,16:25:46.55:1274,47,0	1/1:9,21:30:51.62:1349,52,0	0/1:11,0:27:43.26:942,0,43	1/1:3,1:18:26.89:778,27,0	0/1:13,10:23:14.95:921,0,15	0/1:11,11:22:0.65:660,0,1	1/1:5,24:30:82.16:1628,82,0	1/1:5,19:24:48.36:1240,48,0	0/1:7,15:22:12.07:963,0,12	1/1:10,22:32:57.73:1586,58,0	1/1:8,20:28:77.53:1512,78,0	1/1:8,8:16:44.63:738,45,0	1/1:2,10:12:9.13:612,9,0	1/1:10,9:19:30.97:952,31,0	1/1:9,19:29:34.19:1288,34,0	1/1:12,16:28:47.75:1099,48,0	1/1:8,18:26:49.44:1273,49,0	1/1:7,13:22:25.17:894,25,0	1/1:4,14:18:35.95:674,36,0	1/1:8,18:27:73.93:1394,74,0	1/1:7,15:22:66.22:1302,66,0	1/1:6,9:14:32.86:657,33,0	1/1:0,4:4:12.04:249,12,0
chr10	19359110	.	T	TA	2370.25	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-9.994;DP=638;FS=7.134;HRun=10;HaplotypeScore=65.5830;InbreedingCoeff=0.9701;MQ=72.21;MQ0=0;MQRankSum=2.501;QD=22.57;ReadPosRankSum=-0.469;VQSLOD=4.3312;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,22:28:69.19:771,69,0	0/0:9,0:9:20.97:0,21,172	0/0:15,0:15:18.80:0,19,157	0/0:15,0:15:21.62:0,22,143	0/0:28,0:29:64.64:0,65,495	0/0:23,0:23:65.41:0,65,524	0/0:31,0:31:89.85:0,90,731	1/1:9,24:33:50.83:705,51,0	1/1:2,13:15:36.09:384,36,0	0/0:39,0:40:76.56:0,77,605	0/0:30,0:30:71.63:0,72,563	0/0:26,0:26:71.85:0,72,583	0/0:19,0:19:47.86:0,48,386	0/0:20,0:20:55.09:0,55,438	1/1:4,25:29:63.16:670,63,0	0/0:30,0:30:58.04:0,58,627	0/0:21,0:21:44.89:0,45,362	0/0:19,0:21:43.98:0,44,351	0/0:18,0:18:44.88:0,45,360	0/0:24,2:26:8.67:0,9,388	0/0:15,0:15:38.92:0,39,315	0/0:23,0:23:62.77:0,63,502	0/0:26,1:27:27.73:0,28,420	0/0:22,0:22:53.91:0,54,440	0/0:17,0:17:47.93:0,48,391	0/0:25,1:26:59.86:0,60,486	0/0:22,0:23:64.90:0,65,511	0/0:6,0:6:11.97:0,12,98
chr10	19359231	.	G	GA	7021.28	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=-12.190;DP=688;FS=8.561;HRun=9;HaplotypeScore=66.5136;InbreedingCoeff=0.9496;MQ=69.85;MQ0=0;MQRankSum=0.633;QD=24.21;ReadPosRankSum=1.060;VQSLOD=5.5774;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,35:41:87.22:953,87,0	1/1:2,4:6:12.03:131,12,0	0/0:12,0:12:18.64:0,19,205	0/1:11,0:11:1.43:1,0,72	1/1:5,22:27:60.08:647,60,0	0/0:27,0:27:65.98:0,66,573	0/0:19,0:19:50.98:0,51,443	1/1:4,24:29:75.05:798,75,0	1/1:1,24:25:51.14:565,51,0	0/0:30,0:30:77.94:0,78,673	0/0:20,0:20:56.98:0,57,495	0/0:31,0:31:74.91:0,75,644	0/0:20,0:20:47.97:0,48,417	0/0:23,0:23:59.96:0,60,517	1/1:5,23:28:48.13:531,48,0	0/0:20,0:19:50.97:0,51,443	0/0:33,0:35:66.70:0,67,748	0/0:22,0:22:50.92:0,51,432	0/0:23,0:23:47.97:0,48,417	0/0:32,0:32:74.95:0,75,651	0/0:11,0:11:26.98:0,27,229	0/0:28,0:28:77.91:0,78,665	0/0:21,0:21:56.92:0,57,483	0/0:24,0:24:62.91:0,63,536	1/1:6,36:42:99:1095,99,0	1/1:3,33:36:96.20:1040,96,0	1/1:1,29:30:78.21:863,78,0	1/1:0,14:14:36.10:398,36,0
chr10	19360086	.	TCAAAAACAAAAAA	T	6451.69	PASS	AB=0.550;AC=11;AF=0.196;AN=56;BaseQRankSum=7.441;DP=672;FS=1.011;HRun=0;HaplotypeScore=260.0820;InbreedingCoeff=0.8593;MQ=64.72;MQ0=5;MQRankSum=-8.509;QD=53.32;ReadPosRankSum=4.539;VQSLOD=3.7952;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:96.79:0,97,4809	1/1:0,8:8:9.03:344,9,0	0/0:27,0:19:42.86:0,43,1091	0/0:22,0:14:35.88:0,36,1197	1/1:2,23:25:57.04:1652,57,0	0/0:15,0:15:42.12:0,42,1447	0/0:22,0:22:50.88:0,51,2107	0/0:35,0:34:66.23:0,66,2954	0/0:28,0:28:75.21:0,75,3603	0/0:30,0:30:84.29:0,84,4309	0/0:26,0:26:75.26:0,75,3625	0/0:17,0:17:39.13:0,39,2028	0/0:29,0:29:75.20:0,75,3103	0/0:17,0:17:39.13:0,39,1697	0/0:15,0:15:39.13:0,39,2003	0/0:28,0:28:75.26:0,75,3931	0/0:24,0:24:63.22:0,63,2995	0/0:24,0:24:66.20:0,66,3102	0/0:32,0:31:78.27:0,78,2791	0/0:31,0:31:90.31:0,90,4529	0/0:14,0:14:39.13:0,39,1854	0/0:37,0:37:96.33:0,96,4630	0/0:22,0:22:57.20:0,57,2943	0/0:15,0:15:39.08:0,39,1995	1/1:4,20:24:33.11:1227,33,0	0/1:4,18:22:99:1429,0,572	1/1:3,27:29:39.13:1456,39,0	1/1:1,11:12:9:344,9,0
chr10	19360119	.	ACC	A	2560.26	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=7.064;DP=626;FS=0.992;HRun=6;HaplotypeScore=109.0894;InbreedingCoeff=0.9959;MQ=65.77;MQ0=4;MQRankSum=-1.849;QD=29.09;ReadPosRankSum=-0.306;VQSLOD=2.9802;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,30:33:75.23:979,75,0	0/0:8,0:8:18.06:0,18,303	0/0:27,0:22:48.07:0,48,773	0/0:18,0:11:27.09:0,27,434	0/0:25,0:25:69.24:0,69,1195	0/0:21,0:21:63.22:0,63,1094	0/0:18,0:18:54.17:0,54,928	1/1:6,23:28:72.21:924,72,0	1/1:2,24:26:60.20:800,60,0	0/0:31,0:31:93.32:0,93,1610	0/0:23,0:23:57.18:0,57,975	0/0:14,0:14:42.14:0,42,740	0/0:20,0:20:60.21:0,60,1044	0/0:21,0:21:63.22:0,63,1100	0/0:22,0:22:63.22:0,63,1116	0/0:21,0:21:54.18:0,54,937	0/0:25,0:25:72.25:0,72,1270	0/0:24,0:24:72.20:0,72,1213	0/0:22,0:21:62.68:0,63,994	0/0:37,0:37:99:0,105,1789	0/0:23,0:22:66.23:0,66,1165	0/0:25,0:25:69.24:0,69,1196	0/0:18,0:18:54.17:0,54,930	0/0:12,0:12:33.11:0,33,578	0/0:20,0:20:33.11:0,33,567	0/0:21,0:21:57.08:0,57,954	0/0:29,0:29:54.18:0,54,926	0/0:13,0:13:24.08:0,24,409
chr10	19360510	.	T	TC	2422.59	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-7.606;DP=582;FS=3.734;HRun=4;HaplotypeScore=60.3314;InbreedingCoeff=0.9848;MQ=88.17;MQ0=0;MQRankSum=-5.109;QD=30.67;ReadPosRankSum=0.832;VQSLOD=3.9880;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,36:37:87.29:1188,87,0	0/0:8,0:8:24.07:0,24,272	0/0:25,0:25:66.07:0,66,705	0/0:16,0:16:39.08:0,39,429	0/0:19,0:19:42.06:0,42,456	0/0:15,0:15:45.13:0,45,509	0/0:19,0:19:54.15:0,54,612	1/1:4,18:22:48.14:639,48,0	1/1:1,19:20:54.18:739,54,0	0/0:22,0:21:60.17:0,60,673	0/0:12,0:12:27.07:0,27,306	0/0:29,0:29:87.25:0,87,986	0/0:27,0:27:78.19:0,78,865	0/0:23,0:23:69.18:0,69,772	0/0:19,0:19:54.14:0,54,602	0/0:28,1:29:40.18:0,40,834	0/0:21,0:21:63.18:0,63,714	0/0:26,0:26:75.19:0,75,838	0/0:15,0:15:39.07:0,39,428	0/0:14,0:14:33.09:0,33,373	0/0:42,0:42:99:0,120,1348	0/0:12,0:12:30.07:0,30,328	0/0:7,0:7:12.03:0,12,136	0/0:38,0:38:99:0,102,1142	0/0:14,0:14:42.12:0,42,474	0/0:22,0:22:61.98:0,62,676	0/0:23,0:23:69.20:0,69,782	0/0:6,0:6:18.05:0,18,204
chr10	19360840	.	TC	T	15351.75	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=5.507;DP=809;FS=2.135;HRun=4;HaplotypeScore=87.4803;InbreedingCoeff=0.9999;MQ=86.56;MQ0=0;MQRankSum=-2.234;QD=33.67;ReadPosRankSum=1.997;VQSLOD=5.4100;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,120,1651	0/0:10,0:10:30.10:0,30,420	0/0:24,0:24:66.21:0,66,903	0/0:29,0:29:87.29:0,87,1198	0/0:26,0:26:75.25:0,75,1042	1/1:1,39:40:99:1332,111,0	1/1:2,22:24:54.17:648,54,0	0/0:22,0:22:63.19:0,63,852	0/0:36,0:36:99:0,108,1508	1/1:2,31:33:96.29:1146,96,0	1/1:0,28:28:81.25:972,81,0	1/1:2,27:29:78.24:936,78,0	1/1:0,35:35:99:1186,99,0	1/1:0,30:30:87.27:1044,87,0	0/0:44,0:44:99:0,129,1787	1/1:1,32:33:90.28:1080,90,0	1/1:1,23:24:66.20:792,66,0	1/1:2,17:19:51.16:612,51,0	1/1:1,22:23:66.14:744,66,0	1/1:0,23:23:69.21:828,69,0	1/1:0,42:42:99:1512,126,0	1/1:1,25:26:72.22:864,72,0	1/1:0,23:23:69.21:828,69,0	1/1:1,23:24:69.21:828,69,0	0/0:24,0:24:72.24:0,72,1008	0/0:38,2:40:45.35:0,45,1458	0/0:42,0:42:99:0,126,1757	0/0:13,0:13:39.12:0,39,528
chr10	19364562	.	GCATA	G	5218.36	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-7.211;DP=841;FS=3.169;HRun=0;HaplotypeScore=214.9586;InbreedingCoeff=0.8403;MQ=58.10;MQ0=4;MQRankSum=8.620;QD=30.70;ReadPosRankSum=5.514;VQSLOD=4.5729;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:32.93:0,33,421	1/1:3,11:14:27.09:438,27,0	0/0:22,0:12:5.99:0,6,94	0/0:11,0:7:3.01:0,3,73	1/1:7,26:33:60.20:972,60,0	0/0:6,0:20:19.01:0,19,146	0/0:27,0:27:10.42:0,10,70	0/0:48,0:48:95.64:0,96,1045	0/0:26,0:26:8.94:0,9,258	0/0:29,0:30:11.78:0,12,335	0/0:14,0:33:6.82:0,7,48	0/0:12,0:41:24.63:0,25,235	0/0:18,0:45:28.40:0,28,195	0/0:12,0:30:30.74:0,31,201	0/0:13,0:43:35.96:0,36,214	0/0:11,0:43:34.35:0,34,218	0/0:12,0:24:8.94:0,9,73	0/0:6,0:6:2.94:0,3,18	0/0:6,0:12:17.96:0,18,169	0/0:14,0:29:22.77:0,23,266	0/0:22,0:22:11.58:0,12,90	0/0:9,0:36:31.49:0,31,143	0/0:6,0:31:19.33:0,19,103	0/0:19,0:39:8.73:0,9,59	1/1:2,31:33:69.24:1118,69,0	1/1:14,30:44:87.39:1352,87,0	1/1:7,21:29:51.17:803,51,0	1/1:5,12:17:33.11:534,33,0
chr10	19364593	.	G	GACAT	4753.47	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=11.502;DP=834;FS=13.157;HRun=0;HaplotypeScore=224.7488;InbreedingCoeff=-0.2949;MQ=51.72;MQ0=5;MQRankSum=-10.112;QD=7.81;ReadPosRankSum=0.116;VQSLOD=2.5560;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:2,41:46:57.14:1459,57,0	0/0:15,0:15:39.13:0,39,675	0/0:25,0:13:32.18:0,32,488	0/0:16,0:7:16.30:0,16,255	0/0:39,0:39:96.75:0,97,1542	0/1:18,0:18:99:176,0,274	0/1:34,0:34:95.60:96,0,379	0/1:55,0:55:99:262,0,898	1/1:3,29:32:23.12:859,23,0	0/1:34,0:33:34.21:34,0,765	0/1:25,0:25:35.15:35,0,313	0/1:40,0:40:99:144,0,572	0/1:38,0:38:99:235,0,404	0/1:34,0:34:99:195,0,620	0/1:41,0:41:99:314,0,542	0/1:37,0:37:99:320,0,382	0/1:18,0:18:7.24:7,0,183	0/1:8,0:8:25.12:25,0,213	0/0:13,0:13:7.67:0,8,437	0/1:30,0:29:41.16:41,0,597	0/1:23,0:23:25.83:26,0,223	0/1:38,0:37:99:366,0,460	0/1:37,0:36:99:144,0,558	0/1:21,0:21:16.64:17,0,222	0/0:37,0:37:87.28:0,87,1503	0/0:38,0:38:99:0,105,1777	0/0:28,0:27:66.19:0,66,1084	0/0:14,0:14:39.10:0,39,605
chr10	19364607	.	A	AATAC	1656.57	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-6.300;DP=866;FS=3.094;HRun=0;HaplotypeScore=246.0350;InbreedingCoeff=0.9348;MQ=55.04;MQ0=2;MQRankSum=-2.909;QD=37.65;ReadPosRankSum=-3.877;VQSLOD=2.8925;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:61.53:0,62,457	0/0:17,0:17:42.12:0,42,657	0/0:24,0:16:39.04:0,39,556	0/0:17,0:10:9.01:0,9,128	0/0:40,0:40:96.71:0,97,1525	0/0:19,0:18:29.92:0,30,441	0/0:35,0:35:34.70:0,35,704	1/1:12,30:44:93.53:1751,94,0	0/0:32,0:32:41.70:0,42,441	0/0:40,0:39:96.72:0,97,1488	0/0:26,0:26:37.16:0,37,595	0/0:41,0:41:70.54:0,71,1125	0/0:48,0:48:76.31:0,76,1084	0/0:37,0:37:61.84:0,62,996	0/0:43,0:43:58.48:0,58,977	0/0:38,0:38:48.41:0,48,745	0/0:21,0:21:35.80:0,36,418	0/0:8,0:8:17.72:0,18,268	0/0:16,0:16:33.03:0,33,458	0/0:32,0:32:40.38:0,40,810	0/0:23,0:23:26.44:0,26,438	0/0:37,0:36:51.04:0,51,848	0/0:38,0:37:56.94:0,57,921	0/0:24,0:24:35.68:0,36,498	0/0:37,0:37:90.29:0,90,1486	0/0:33,0:33:81.20:0,81,1305	0/0:31,0:30:72.19:0,72,1097	0/0:14,0:14:33.08:0,33,535
chr10	19365316	.	GTA	G	3156.42	PASS	AB=0.723;AC=34;AF=0.607;AN=56;BaseQRankSum=-1.183;DP=668;FS=7.730;HRun=0;HaplotypeScore=133.3587;InbreedingCoeff=0.7627;MQ=60.86;MQ0=8;MQRankSum=0.793;QD=7.13;ReadPosRankSum=-1.377;VQSLOD=2.7830;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:38:35.80:0,36,315	0/0:12,0:12:9.23:0,9,51	0/0:23,0:8:11.85:0,12,105	0/0:28,0:9:16.64:0,17,151	0/0:25,0:25:47.75:0,48,369	1/1:20,0:20:14.92:121,15,0	1/1:33,0:32:8.87:61,9,0	1/1:27,0:26:59.81:498,60,0	0/0:22,0:22:49.77:0,50,348	1/1:22,0:22:49.51:371,50,0	1/1:21,0:21:8.66:71,9,0	1/1:23,0:23:5.94:42,6,0	1/1:25,0:25:9.36:53,9,0	1/1:23,0:23:6:52,6,0	0/1:21,2:23:2.36:331,0,2	1/1:29,0:29:14.78:129,15,0	1/1:27,0:26:26.21:217,26,0	1/1:19,0:19:15.38:251,15,0	1/1:14,0:14:5.61:230,6,0	0/1:2,18:20:30.06:38,0,30	1/1:34,0:32:12.50:394,12,0	1/1:26,0:26:8.46:74,8,0	1/1:18,0:18:35.59:300,36,0	1/1:39,0:38:16.96:132,17,0	0/0:22,0:22:27.26:0,27,168	0/0:23,0:23:8.54:0,9,352	0/0:18,0:18:30.73:0,31,217	0/0:13,0:13:28.64:0,29,178
chr10	19365317	.	TATAC	T	4387.14	PASS	AB=0.949;AC=36;AF=0.643;AN=56;BaseQRankSum=2.553;DP=656;FS=3.490;HRun=0;HaplotypeScore=139.9638;InbreedingCoeff=0.0954;MQ=60.91;MQ0=9;MQRankSum=-2.461;QD=7.76;ReadPosRankSum=-0.951;VQSLOD=4.0139;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:37,0:36:13.90:14,0,317	0/1:12,0:12:10.06:10,0,34	0/0:23,0:8:11.54:0,12,104	0/0:27,0:8:16.62:0,17,151	0/0:25,0:25:47.75:0,48,369	1/1:1,16:20:14.96:213,15,0	1/1:0,30:32:8.93:101,9,0	1/1:24,0:23:55.70:478,56,0	0/1:21,0:21:89.81:90,0,244	1/1:1,20:22:49.56:468,50,0	1/1:0,20:21:8.69:136,9,0	1/1:1,19:21:6.02:107,6,0	1/1:4,21:25:14.46:195,14,0	1/1:1,19:23:5.89:98,6,0	0/1:23,0:23:99:223,0,115	1/1:1,25:29:14.79:236,15,0	1/1:2,22:26:29.30:483,29,0	0/1:16,0:18:1.89:329,0,2	0/1:13,0:13:20.94:224,0,21	0/1:21,0:20:3.04:3,0,57	0/1:33,0:31:99:215,0,207	1/1:1,23:26:8.77:153,9,0	1/1:15,1:18:30.61:258,31,0	0/1:5,31:38:2.72:241,0,3	0/1:23,0:23:27.88:28,0,112	0/1:22,1:23:65.84:66,0,315	0/0:16,0:16:14.25:0,14,185	0/1:13,0:13:17.25:17,0,125
chr10	19369051	.	A	AC	2919.17	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-10.635;DP=586;FS=2.574;HRun=6;HaplotypeScore=60.8364;InbreedingCoeff=0.9626;MQ=86.70;MQ0=0;MQRankSum=-0.379;QD=29.79;ReadPosRankSum=-2.111;VQSLOD=3.5724;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:66.11:0,66,662	0/0:12,0:12:29.86:0,30,288	0/0:19,0:19:38.88:0,39,380	0/0:30,0:30:69.29:0,69,712	0/0:14,0:14:42.08:0,42,421	0/0:18,0:18:48.11:0,48,490	0/0:26,0:26:72.16:0,72,734	1/1:1,21:22:60.14:707,60,0	0/0:26,0:26:63.14:0,63,642	0/0:14,0:14:42.09:0,42,428	0/0:5,0:5:12.03:0,12,122	0/0:36,0:36:99:0,99,1003	0/0:18,0:18:54.12:0,54,550	0/0:24,0:24:69.14:0,69,697	0/0:29,0:29:81.18:0,81,823	0/0:18,0:18:48.10:0,48,489	0/0:34,0:34:78.17:0,78,795	0/0:21,0:21:54.12:0,54,550	1/1:5,19:24:57.16:701,57,0	1/1:0,15:15:38.71:463,39,0	1/1:1,36:37:96.31:1208,96,0	0/0:17,0:17:51.08:0,51,510	0/0:11,0:11:27.04:0,27,269	0/0:31,0:31:74.91:0,75,734	0/0:15,0:15:32.74:0,33,316	0/0:20,0:20:60.13:0,60,610	0/0:23,0:23:60.12:0,60,605	0/0:2,0:2:6.01:0,6,61
chr10	19370950	.	T	TA	2651.29	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-11.284;DP=683;FS=0.860;HRun=9;HaplotypeScore=84.9677;InbreedingCoeff=0.9982;MQ=78.45;MQ0=1;MQRankSum=-0.034;QD=23.05;ReadPosRankSum=-5.404;VQSLOD=1.6348;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,102,873	0/0:11,0:11:26.98:0,27,234	0/0:21,0:21:32.93:0,33,278	0/0:14,0:14:20.85:0,21,171	0/0:35,0:36:97.99:0,98,836	0/0:26,0:25:60.03:0,60,534	0/0:15,0:15:41.99:0,42,365	1/1:9,28:38:60.98:864,61,0	0/0:31,0:31:83.94:0,84,722	0/0:41,0:41:99:0,120,1036	0/0:20,0:20:56.99:0,57,494	0/0:22,0:22:53.96:0,54,465	0/0:28,0:28:71.94:0,72,621	0/0:25,0:25:62.96:0,63,546	0/0:23,0:23:62.97:0,63,543	0/0:25,0:25:74.97:0,75,647	0/0:21,0:21:39.05:0,39,428	0/0:14,0:13:32.99:0,33,286	1/1:2,16:19:47.87:460,48,0	1/1:7,28:36:89.87:922,90,0	1/1:1,21:22:51.14:565,51,0	0/0:26,0:25:68.94:0,69,590	0/0:18,0:18:47.99:0,48,417	0/0:23,0:23:62.97:0,63,544	0/0:27,0:27:77.97:0,78,677	0/0:28,0:28:71.94:0,72,616	0/0:23,0:23:56.96:0,57,495	0/0:11,0:11:29.99:0,30,260
chr10	19371200	.	T	TG	3029.28	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-5.487;DP=626;FS=8.124;HRun=5;HaplotypeScore=65.4371;InbreedingCoeff=0.9835;MQ=92.12;MQ0=0;MQRankSum=-2.499;QD=28.85;ReadPosRankSum=-2.214;VQSLOD=2.9124;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:35:99:0,99,1063	0/0:12,0:12:33.06:0,33,346	0/0:25,0:25:68.99:0,69,712	0/0:28,0:28:53.99:0,54,600	0/0:19,0:19:45.07:0,45,466	0/0:19,0:19:51.13:0,51,547	0/0:29,0:29:78.19:0,78,838	1/1:3,20:23:63.14:794,63,0	0/0:24,0:24:66.15:0,66,701	0/0:13,0:13:33.08:0,33,355	0/0:17,0:17:48.12:0,48,516	0/0:30,0:30:72.16:0,72,766	0/0:27,0:27:72.18:0,72,772	0/0:26,0:26:66.15:0,66,706	0/0:20,0:20:45.05:0,45,463	0/0:14,0:14:33.08:0,33,353	0/0:25,0:25:69.17:0,69,742	0/0:12,0:12:30.04:0,30,311	1/1:3,13:16:39.13:512,39,0	1/1:3,15:18:32.70:427,33,0	1/1:4,44:48:99:1456,111,0	0/0:25,0:25:72.16:0,72,765	0/0:15,0:15:42.11:0,42,451	0/0:23,0:23:60.15:0,60,645	0/0:29,0:29:78.18:0,78,831	0/0:26,0:26:69.14:0,69,724	0/0:24,0:24:66.15:0,66,701	0/0:3,0:3:9.02:0,9,97
chr10	19371352	.	TAGAC	T	3594.10	PASS	AB=0.627;AC=19;AF=0.339;AN=56;BaseQRankSum=11.394;DP=668;FS=6.533;HRun=0;HaplotypeScore=129.2038;InbreedingCoeff=0.8792;MQ=67.36;MQ0=2;MQRankSum=-2.852;QD=17.20;ReadPosRankSum=0.480;VQSLOD=3.1267;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:63:0,63,1471	1/1:5,8:13:21.07:333,21,0	0/0:26,0:19:15.04:0,15,306	0/0:35,0:32:24.97:0,25,529	1/1:13,13:26:33.11:524,33,0	0/0:31,0:31:63.22:0,63,1495	0/0:19,0:19:42.13:0,42,941	1/1:20,0:20:14.68:139,15,0	0/0:21,0:21:39.13:0,39,901	0/0:16,0:16:21.07:0,21,502	0/0:25,0:25:51.18:0,51,1215	0/0:28,0:28:48.16:0,48,1127	0/0:26,0:26:45.15:0,45,1072	0/0:28,0:28:51.16:0,51,1142	0/0:16,0:25:33.10:0,33,558	0/0:14,0:14:21.07:0,21,501	0/0:25,0:25:42.14:0,42,1003	0/0:24,0:24:51.17:0,51,1190	1/1:18,0:18:18.02:168,18,0	1/1:27,0:27:57.07:531,57,0	1/1:22,0:22:12.01:112,12,0	0/0:24,0:24:42.13:0,42,949	0/0:22,0:22:42.14:0,42,1003	0/0:30,0:30:54.19:0,54,1264	1/1:14,11:25:30.10:476,30,0	0/1:13,19:32:80.18:816,0,80	1/1:13,11:24:30.06:449,30,0	1/1:1,1:2:3.01:48,3,0
chr10	19371366	.	GACAGACA	G	1471.30	PASS	AB=0.793;AC=5;AF=0.089;AN=56;BaseQRankSum=9.464;DP=638;FS=0.000;HRun=0;HaplotypeScore=168.6083;InbreedingCoeff=0.2690;MQ=60.22;MQ0=3;MQRankSum=-8.580;QD=17.73;ReadPosRankSum=2.529;VQSLOD=2.9327;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,126,3613	0/0:11,0:11:30.03:0,30,334	0/0:34,0:22:66.22:0,66,1482	0/0:28,0:23:66.20:0,66,1555	0/0:19,0:19:48.03:0,48,540	0/0:29,0:29:84.29:0,84,2951	0/0:22,0:22:63.20:0,63,2108	0/1:15,5:20:99:192,0,240	0/0:17,0:17:51.17:0,51,1785	0/0:19,0:19:57.19:0,57,1637	0/0:26,0:26:78.26:0,78,2602	0/0:26,0:26:75.26:0,75,2521	0/0:27,0:27:78.26:0,78,2599	0/0:24,0:24:72.24:0,72,2435	0/0:22,0:22:48.15:0,48,1420	0/0:14,0:14:39.12:0,39,1161	0/0:23,0:23:63.21:0,63,2070	0/0:23,0:23:66.18:0,66,2445	0/1:11,6:17:99:271,0,151	1/1:6,19:25:8.55:942,9,0	0/1:17,4:21:74.18:183,0,74	0/0:23,0:23:66.22:0,66,2160	0/0:22,0:22:66.21:0,66,2246	0/0:28,0:28:78.26:0,78,2658	0/0:20,0:20:54.07:0,54,714	0/0:31,0:31:90.12:0,90,1267	0/0:22,0:22:63.10:0,63,738	0/0:2,0:2:3:0,3,26
chr10	19371550	.	GCACACACACA	G	4628.79	PASS	AB=0.928;AC=31;AF=0.574;AN=54;BaseQRankSum=4.312;DP=516;FS=4.474;HRun=0;HaplotypeScore=178.5791;InbreedingCoeff=0.5530;MQ=60.96;MQ0=7;MQRankSum=-7.387;QD=15.53;ReadPosRankSum=-1.048;VQSLOD=3.4471;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:26:2.76:0,3,24	0/0:7,0:7:12.04:0,12,257	./.	0/0:29,0:23:0:0,0,0	0/0:23,0:23:39.13:0,39,1428	0/1:13,0:14:11.94:156,0,12	0/1:15,1:17:14.41:14,0,75	0/0:13,0:24:3:0,3,29	1/1:15,0:20:11.79:279,12,0	1/1:9,7:16:15.05:382,15,0	1/1:6,6:12:11.91:149,12,0	1/1:7,9:18:30.06:782,30,0	1/1:7,6:15:23.97:583,24,0	1/1:12,14:27:33.37:900,33,0	0/0:15,0:29:32.70:0,33,495	1/1:10,5:16:11.07:273,11,0	1/1:11,2:13:3.01:89,3,0	1/1:13,2:15:2.31:87,2,0	1/1:14,0:25:12.04:279,12,0	1/1:5,0:13:12.04:254,12,0	1/1:11,0:20:2.22:7,2,0	1/1:11,7:20:11.02:184,11,0	1/1:6,7:13:2.96:20,3,0	0/1:20,1:21:57.78:192,0,58	0/0:17,0:19:32.60:0,33,1218	0/0:14,0:13:16.28:0,16,491	0/0:17,0:20:33.11:0,33,1183	0/0:4,0:4:9.01:0,9,187
chr10	19372495	.	GGT	G	558.06	PASS	AB=0.976;AC=15;AF=0.268;AN=56;BaseQRankSum=-1.354;DP=602;FS=14.566;HRun=0;HaplotypeScore=86.3838;InbreedingCoeff=-0.0544;MQ=61.96;MQ0=28;MQRankSum=0.635;QD=1.72;ReadPosRankSum=1.580;VQSLOD=0.8392;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:31,0:30:17.99:171,18,0	0/0:9,0:9:8.64:0,9,81	0/0:25,0:14:0.47:0,0,1	0/0:35,0:20:0.47:0,0,1	0/0:18,0:18:14.91:0,15,150	0/0:19,0:18:17.54:0,18,209	0/1:29,1:30:99:100,0,143	0/0:20,0:18:3.85:0,4,22	1/1:12,0:12:8.75:79,9,0	0/1:20,3:20:34.80:35,0,48	0/0:16,0:15:8.95:0,9,88	0/1:25,0:24:55.43:55,0,190	0/1:27,4:29:22.35:22,0,80	0/0:14,0:14:12.43:0,12,127	0/0:23,0:23:9:0,9,82	0/1:22,0:22:19.38:19,0,86	0/1:22,0:20:41.71:42,0,161	0/1:19,0:18:42.93:43,0,117	0/0:24,0:23:5.98:0,6,51	0/1:13,0:12:0.93:1,0,94	0/1:42,0:39:40.42:40,0,189	0/1:18,0:18:23.30:23,0,103	0/0:13,0:12:9.01:0,9,103	0/1:36,0:34:80.44:80,0,115	0/0:14,0:13:6:0,6,54	0/0:18,0:18:21.84:0,22,217	0/0:18,0:17:6:0,6,224	0/0:11,0:9:21.04:0,21,220
chr10	19372541	.	TAGAGAGAG	T	115.84	PASS	AB=1.000;AC=3;AF=0.060;AN=50;BaseQRankSum=1.212;DP=538;FS=2.583;HRun=0;HaplotypeScore=143.5708;InbreedingCoeff=0.3840;MQ=44.08;MQ0=60;MQRankSum=-2.206;QD=3.41;ReadPosRankSum=-0.364;VQSLOD=2.1555;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:19:16.41:0,16,490	./.	./.	./.	0/0:24,0:24:27.06:0,27,648	0/0:19,0:14:3.01:0,3,123	0/0:27,0:26:24.08:0,24,864	0/0:22,0:16:19.84:0,20,485	0/0:21,0:19:10.65:0,11,206	0/0:24,0:21:33.05:0,33,1039	0/0:14,0:12:12.04:0,12,415	0/0:23,0:21:12.04:0,12,392	0/0:28,0:25:25.60:0,26,821	0/0:19,0:18:10.59:0,11,302	1/1:13,5:18:5.54:149,6,0	0/0:20,0:19:21.54:0,22,772	0/0:25,0:23:39.13:0,39,1223	0/0:20,0:17:23.20:0,23,796	0/1:16,0:11:35.06:59,0,35	0/0:16,0:15:12.93:0,13,273	0/0:30,0:21:1.82:0,2,6	0/0:24,0:23:17.86:0,18,495	0/0:15,0:14:12.04:0,12,394	0/0:36,0:29:33.11:0,33,1147	0/0:14,0:13:14.88:0,15,323	0/0:19,0:20:39.13:0,39,1048	0/0:21,0:20:29.26:0,29,658	0/0:15,0:12:18.16:0,18,357
chr10	19372546	.	A	AGA	1130.53	PASS	AB=0.987;AC=19;AF=0.380;AN=50;BaseQRankSum=-2.260;DP=543;FS=1.844;HRun=0;HaplotypeScore=102.7812;InbreedingCoeff=-0.2119;MQ=43.98;MQ0=56;MQRankSum=0.379;QD=3.09;ReadPosRankSum=-2.509;VQSLOD=2.0511;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:21,0:19:53.18:53,0,54	./.	./.	./.	0/0:25,0:25:21.04:0,21,157	0/0:18,0:13:3.01:0,3,32	0/1:31,0:30:8.07:231,0,8	1/1:20,0:15:1.25:3,1,0	0/1:21,0:18:0:0,0,0	0/1:27,0:24:16.92:65,0,17	0/1:14,0:12:20.11:97,0,20	1/1:23,0:21:3.01:34,3,0	0/1:28,0:25:45.13:60,0,45	1/1:20,0:19:4.73:47,5,0	0/0:19,0:19:5.90:0,6,26	0/1:19,0:18:14.12:134,0,14	0/1:26,0:24:43.34:176,0,43	0/1:18,0:15:16.75:101,0,17	0/0:14,0:10:5.68:0,6,28	0/0:16,0:15:11.35:0,11,56	0/0:29,0:21:2.80:0,3,14	0/1:19,4:23:38.74:39,0,51	0/1:17,0:16:14.65:62,0,15	0/1:36,0:29:67.26:151,0,67	0/0:13,0:12:14.50:0,14,94	0/1:21,0:21:18.48:18,0,142	0/0:21,0:20:11.86:0,12,109	0/0:15,0:12:8.32:0,8,66
chr10	19372586	.	AGG	A	1172.33	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-3.014;DP=555;FS=0.000;HRun=2;HaplotypeScore=84.1635;InbreedingCoeff=0.9294;MQ=58.34;MQ0=13;MQRankSum=0.259;QD=14.65;ReadPosRankSum=-2.030;VQSLOD=0.0604;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:17:36.54:0,37,420	0/0:9,0:9:23.73:0,24,174	0/0:28,0:14:38.96:0,39,395	0/0:43,0:20:54.44:0,54,515	0/0:16,0:16:22.27:0,22,335	0/0:12,0:12:20.74:0,21,196	0/0:29,0:29:62.93:0,63,682	1/1:24,0:23:56.17:498,56,0	0/0:18,0:17:16.86:0,17,165	0/0:21,0:21:37.40:0,37,479	0/0:16,0:16:35.90:0,36,377	0/0:16,0:16:35.95:0,36,357	0/0:27,0:27:53.80:0,54,600	0/0:20,0:20:35.99:0,36,364	0/0:21,0:21:47.14:0,47,348	0/0:21,0:21:51.05:0,51,602	0/0:22,0:20:50.75:0,51,601	0/0:12,0:11:29.98:0,30,387	1/1:17,0:15:43.80:391,44,0	1/1:17,0:16:38.93:403,39,0	1/1:2,20:22:3.01:31,3,0	0/0:22,0:22:34.42:0,34,297	0/0:16,0:16:32.92:0,33,334	0/0:31,0:29:56.61:0,57,565	0/0:10,0:10:10.08:0,10,156	0/0:19,0:18:23.58:0,24,426	0/0:14,0:14:26.08:0,26,287	0/0:14,0:13:26.03:0,26,271
chr10	19372946	.	TC	T	242.05	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.840;DP=476;FS=3.666;HRun=7;HaplotypeScore=49.4251;InbreedingCoeff=0.9521;MQ=71.82;MQ0=1;MQRankSum=-0.574;QD=15.13;ReadPosRankSum=0.106;VQSLOD=3.1193;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,1:27:38.54:0,39,799	0/0:12,0:12:27.06:0,27,323	0/0:13,0:10:23.65:0,24,235	0/0:17,0:14:14.87:0,15,147	0/0:13,0:13:36.12:0,36,452	0/0:15,0:15:45.14:0,45,565	0/0:29,0:29:75.22:0,75,917	0/0:11,0:11:24.08:0,24,301	0/0:16,0:16:13.69:0,14,437	0/0:13,0:13:36.12:0,36,452	0/0:7,0:7:21.07:0,21,264	0/0:21,0:21:57.15:0,57,688	0/0:16,0:16:45.13:0,45,553	0/0:23,0:23:69.22:0,69,867	1/1:1,15:16:33.07:337,33,0	0/0:18,0:18:45.12:0,45,534	0/0:41,0:41:99:0,111,1393	0/0:16,0:16:45.14:0,45,566	0/0:17,0:17:42.09:0,42,510	0/0:12,0:12:36.11:0,36,446	0/0:23,0:23:57.17:0,57,701	0/0:16,0:16:39.12:0,39,487	0/0:14,0:14:39.11:0,39,478	0/0:14,0:14:39.12:0,39,491	0/0:9,0:9:24.06:0,24,289	0/0:17,0:17:48.15:0,48,597	0/0:16,0:16:45.12:0,45,547	0/0:14,0:14:39.12:0,39,491
chr10	19376146	.	T	TA	9998.35	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-11.561;DP=625;FS=1.636;HRun=10;HaplotypeScore=62.2237;InbreedingCoeff=0.9692;MQ=72.32;MQ0=0;MQRankSum=-0.517;QD=22.57;ReadPosRankSum=4.471;VQSLOD=5.5494;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:47.69:0,48,535	1/1:0,8:8:24.06:256,24,0	0/0:16,0:16:25.73:0,26,184	0/0:7,0:6:5.93:0,6,43	1/1:2,26:29:74.90:745,75,0	1/1:6,19:25:17.63:476,18,0	1/1:4,15:20:35.25:410,35,0	0/0:27,1:28:68.87:0,69,562	0/0:22,0:22:38.92:0,39,318	1/1:8,24:32:63.15:665,63,0	1/1:2,25:28:74.93:751,75,0	1/1:2,20:23:59.98:622,60,0	1/1:4,13:18:35.16:408,35,0	1/1:6,25:31:35.51:583,36,0	0/0:18,0:18:44.90:0,45,360	1/1:2,18:20:19.54:449,20,0	1/1:3,18:21:29.50:519,29,0	1/1:6,23:29:54.14:576,54,0	0/0:24,0:24:44.91:0,45,369	0/0:25,0:25:59.88:0,60,487	0/0:15,0:15:29.93:0,30,246	1/1:9,19:28:45.20:495,45,0	1/1:4,14:19:38.93:398,39,0	1/1:3,10:14:8.27:278,8,0	1/1:5,26:31:53.55:775,54,0	1/1:4,17:21:29.47:510,29,0	1/1:4,32:37:80.90:846,81,0	1/1:0,7:8:23.89:238,24,0
chr10	19381576	.	T	TTGTTG	4239.72	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=-7.957;DP=619;FS=14.734;HRun=0;HaplotypeScore=112.1860;InbreedingCoeff=0.8270;MQ=59.08;MQ0=14;MQRankSum=-6.502;QD=38.90;ReadPosRankSum=-0.448;VQSLOD=3.9000;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:22:44.39:0,44,724	0/0:14,0:14:33.05:0,33,542	0/0:32,0:10:24.90:0,25,295	0/0:47,0:13:2.97:0,3,68	0/0:27,0:27:62.69:0,63,1022	0/0:26,0:26:66.05:0,66,1033	0/0:21,0:20:50.96:0,51,851	1/1:26,4:30:74.55:977,75,0	0/0:21,0:21:53.52:0,54,944	0/0:21,0:21:54.92:0,55,892	0/0:18,0:18:42.07:0,42,755	0/0:15,0:14:39.02:0,39,582	0/0:14,0:13:27.07:0,27,443	0/0:22,0:22:45.15:0,45,890	0/1:17,0:16:44.08:412,0,44	0/0:16,0:16:36.09:0,36,612	0/0:23,0:22:50.99:0,51,698	0/0:23,0:23:63.57:0,64,1076	1/1:6,20:25:68.62:1020,69,0	1/1:4,13:16:36.12:1053,36,0	1/1:3,15:17:29.98:778,30,0	0/0:24,0:24:56.65:0,57,875	0/0:26,0:25:69.05:0,69,1066	0/0:24,0:24:65.65:0,66,978	0/0:23,0:23:65.93:0,66,1080	0/0:17,0:16:48.15:0,48,927	0/0:24,0:24:51.12:0,51,898	0/0:9,0:8:24.03:0,24,353
chr10	19381599	.	CT	C	642.43	PASS	AB=0.860;AC=17;AF=0.304;AN=56;BaseQRankSum=4.293;DP=584;FS=3.802;HRun=15;HaplotypeScore=75.1891;InbreedingCoeff=0.6299;MQ=49.44;MQ0=28;MQRankSum=2.123;QD=3.06;ReadPosRankSum=5.426;VQSLOD=-0.0243;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,0:26:3.66:35,4,0	1/1:3,9:12:20.62:133,21,0	0/0:16,0:3:0:0,0,0	0/1:26,0:3:0:0,0,0	1/1:11,18:30:34.08:216,34,0	0/0:21,1:24:18.72:0,19,299	0/0:21,0:20:36.41:0,36,307	0/0:28,0:31:44.97:0,45,261	1/1:5,0:17:18.27:53,18,0	0/0:17,0:17:23.95:0,24,203	0/0:22,0:21:13.73:0,14,242	0/0:14,1:14:4.64:0,5,155	0/0:12,0:11:14.82:0,15,114	0/0:18,3:20:4.67:0,5,149	0/0:11,0:16:8.09:0,8,108	0/0:13,0:14:23.21:0,23,227	0/0:22,1:24:15.36:0,15,222	0/0:21,1:20:16.68:0,17,258	0/0:14,1:18:4.17:0,4,110	0/0:20,3:24:29.34:0,29,196	0/0:15,0:13:3.43:0,3,20	0/0:16,2:23:6.38:0,6,185	0/0:29,1:27:13.49:0,13,212	0/1:18,4:25:45.95:46,0,168	1/1:12,12:25:7.15:158,7,0	0/1:12,2:16:4.85:41,0,5	1/1:9,10:22:17.76:94,18,0	1/1:2,2:3:7.95:44,8,0
chr10	19384719	.	T	TA	10144.83	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-3.503;DP=652;FS=7.987;HRun=9;HaplotypeScore=74.4662;InbreedingCoeff=0.9853;MQ=78.46;MQ0=2;MQRankSum=-1.777;QD=20.70;ReadPosRankSum=0.451;VQSLOD=5.3706;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:40:96.59:483,97,0	0/0:18,0:18:44.95:0,45,384	0/0:16,0:17:37.89:0,38,305	0/0:16,0:14:7.25:0,7,53	0/0:25,0:25:68.94:0,69,594	1/1:3,19:22:51.14:564,51,0	1/1:4,22:25:54.15:597,54,0	1/1:7,2:43:97.29:522,97,0	1/1:1,0:14:34.12:171,34,0	1/1:4,20:24:34.03:579,34,0	1/1:4,19:23:57.11:616,57,0	1/1:3,24:27:38.26:609,38,0	1/1:3,11:14:33.09:365,33,0	1/1:2,23:25:63.09:680,63,0	1/1:2,15:17:45.12:498,45,0	1/1:2,25:27:66.18:730,66,0	1/1:6,25:31:72.17:785,72,0	1/1:6,17:23:22.08:472,22,0	1/1:4,1:18:43.18:252,43,0	1/1:5,0:29:65.53:333,66,0	1/1:1,1:23:45.45:227,45,0	1/1:1,23:24:63.17:697,63,0	1/1:2,19:21:48.60:532,49,0	1/1:3,16:19:39.11:431,39,0	0/0:20,0:20:50.99:0,51,443	0/0:20,0:21:50:0,50,420	0/0:31,0:31:86.89:0,87,734	0/0:14,0:14:38.99:0,39,338
chr10	19386599	.	TA	T	1926.08	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=9.069;DP=622;FS=11.602;HRun=9;HaplotypeScore=73.2679;InbreedingCoeff=0.9901;MQ=82.79;MQ0=0;MQRankSum=-1.982;QD=20.06;ReadPosRankSum=-0.624;VQSLOD=3.1777;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,120,1385	0/0:7,0:7:21.06:0,21,242	0/0:20,0:20:35.11:0,35,460	0/0:25,0:25:14.95:0,15,423	0/0:21,0:21:54.16:0,54,623	0/0:21,0:21:60.17:0,60,682	0/0:22,2:24:17.28:0,17,707	1/1:9,16:25:42.01:384,42,0	0/0:22,0:22:66.16:0,66,734	0/0:20,0:20:51.10:0,51,573	0/0:12,0:12:30.04:0,30,331	0/0:31,0:31:84.20:0,84,943	0/0:22,0:22:57.17:0,57,658	0/0:24,0:24:72.19:0,72,819	0/0:24,0:24:66.20:0,66,762	0/0:21,0:21:54.16:0,54,623	0/0:31,0:31:84.25:0,84,969	0/0:35,0:35:90.27:0,90,1038	1/1:0,17:17:51.03:467,51,0	1/1:5,19:24:57.03:522,57,0	1/1:2,28:30:78.04:714,78,0	0/0:13,0:13:39.12:0,39,450	0/0:10,0:10:27.07:0,27,301	0/0:21,0:21:60.15:0,60,679	0/0:19,0:19:51.11:0,51,565	0/0:20,0:20:60.17:0,60,684	0/0:32,0:31:90.27:0,90,1038	0/0:7,0:7:21.06:0,21,242
chr10	19386907	.	A	AT	5266.77	PASS	AB=1.000;AC=45;AF=0.804;AN=56;BaseQRankSum=7.016;DP=585;FS=10.909;HRun=6;HaplotypeScore=101.6687;InbreedingCoeff=0.2130;MQ=73.45;MQ0=0;MQRankSum=-4.896;QD=9.54;ReadPosRankSum=5.080;VQSLOD=1.7172;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:30:65.93:346,66,0	1/1:3,0:3:7.34:29,7,0	0/1:9,0:9:7.31:7,0,145	0/0:13,0:13:12.60:0,13,151	1/1:34,0:34:48.45:230,48,0	1/1:26,0:25:11.61:150,12,0	0/1:25,0:25:7.22:80,0,7	1/1:10,17:27:69.62:741,70,0	1/1:14,0:14:22.84:118,23,0	1/1:30,0:30:37.13:155,37,0	1/1:18,0:18:16.22:115,16,0	0/1:10,0:10:22.01:22,0,32	0/1:28,0:28:58.13:87,0,58	0/1:29,0:29:9.50:128,0,10	0/0:20,0:20:54.12:0,54,546	1/1:28,0:28:12.64:154,13,0	1/1:23,0:23:6.54:136,7,0	1/1:13,0:13:12.94:103,13,0	1/1:6,16:22:66.12:712,66,0	1/1:8,19:27:73.67:737,74,0	1/1:6,8:14:36.05:383,36,0	0/1:22,0:22:16.96:95,0,17	0/1:19,0:19:5.72:106,0,6	1/1:11,0:11:28.66:110,29,0	1/1:17,0:17:13.42:105,13,0	1/1:40,0:40:37.69:212,38,0	1/1:27,0:27:33.76:181,34,0	1/1:6,0:6:7.56:27,8,0
chr10	19386913	.	T	TA	13187.95	PASS	AB=1.000;AC=51;AF=0.911;AN=56;BaseQRankSum=-4.699;DP=584;FS=4.509;HRun=8;HaplotypeScore=78.5532;InbreedingCoeff=0.6906;MQ=73.19;MQ0=0;MQRankSum=-2.501;QD=23.85;ReadPosRankSum=1.295;VQSLOD=5.6990;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,0:29:68.06:487,68,0	1/1:1,4:5:9.03:104,9,0	0/1:9,0:10:12.66:13,0,92	0/0:11,0:11:5.43:0,5,117	1/1:2,32:34:93.11:1025,93,0	1/1:2,22:23:66.20:761,66,0	1/1:3,21:24:45.13:519,45,0	1/1:28,0:28:69.33:379,69,0	1/1:0,1:13:23.84:178,24,0	1/1:2,30:32:90.18:1000,90,0	1/1:1,16:17:48.14:553,48,0	1/1:4,8:12:15.04:173,15,0	1/1:4,22:27:47.97:534,48,0	1/1:4,23:27:66.19:758,66,0	0/0:20,0:20:54.02:0,54,491	1/1:2,23:26:72.18:816,72,0	1/1:3,22:25:54.16:621,54,0	1/1:1,13:14:36.11:415,36,0	1/1:24,0:24:54.80:296,55,0	1/1:26,0:26:64.15:375,64,0	1/1:14,0:14:29:158,29,0	1/1:3,20:23:29.45:562,29,0	1/1:4,16:20:45.05:501,45,0	1/1:0,11:11:33.10:379,33,0	1/1:1,17:18:45.13:519,45,0	1/1:2,35:37:99:1164,102,0	1/1:1,28:29:72.01:794,72,0	1/1:0,4:4:9.03:104,9,0
chr10	19386921	.	A	AT	5388.52	PASS	AB=1.000;AC=36;AF=0.643;AN=56;BaseQRankSum=4.532;DP=590;FS=0.000;HRun=1;HaplotypeScore=103.9119;InbreedingCoeff=-0.0381;MQ=76.56;MQ0=0;MQRankSum=-1.656;QD=9.96;ReadPosRankSum=6.507;VQSLOD=2.3900;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:29:1.42:1,0,66	0/1:6,0:6:13.10:13,0,52	0/1:12,0:13:5.70:6,0,185	0/0:14,0:14:2.95:0,3,176	0/1:37,0:37:35.72:186,0,36	1/1:24,0:23:10.97:147,11,0	0/1:21,0:21:6.59:85,0,7	1/1:3,27:30:84:1021,84,0	0/0:13,0:13:7.26:0,7,68	0/1:34,0:34:38.07:119,0,38	1/1:16,0:16:39.43:140,39,0	0/1:12,0:12:25.25:25,0,59	1/1:22,0:22:27.66:113,28,0	1/1:23,0:24:55.76:221,56,0	0/0:22,0:22:66.17:0,66,799	1/1:24,0:24:56.21:191,56,0	0/1:26,0:26:61.58:105,0,62	0/1:15,0:15:1.08:82,0,1	1/1:0,21:21:63.18:806,63,0	1/1:1,24:25:75.10:908,75,0	1/1:7,8:15:39.08:468,39,0	0/1:24,0:24:16.88:100,0,17	0/1:19,0:19:43.57:74,0,44	0/1:14,0:14:34.87:65,0,35	1/1:19,0:19:12.74:107,13,0	0/1:38,0:38:15.10:178,0,15	1/1:28,0:28:51.33:211,51,0	0/1:5,0:5:16.06:16,0,33
chr10	19388117	.	CT	C	810.17	PASS	AB=0.822;AC=11;AF=0.196;AN=56;BaseQRankSum=2.629;DP=573;FS=4.414;HRun=13;HaplotypeScore=80.6112;InbreedingCoeff=0.5998;MQ=76.15;MQ0=1;MQRankSum=0.534;QD=5.44;ReadPosRankSum=1.756;VQSLOD=2.6246;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:42:47.87:0,48,251	0/0:5,0:12:23.16:0,23,147	0/1:17,1:14:25.63:26,0,77	0/0:21,0:20:15.97:0,16,143	0/0:5,0:24:58.41:0,58,304	0/0:18,1:19:23.15:0,23,382	0/0:17,1:19:16.97:0,17,306	1/1:22,12:36:36.31:242,36,0	0/0:1,0:18:19.89:0,20,100	0/0:18,0:18:29.97:0,30,271	0/1:12,2:14:12.78:13,0,204	0/0:17,0:17:41.85:0,42,372	0/0:23,0:23:50.98:0,51,459	0/0:10,0:10:21.02:0,21,199	1/1:3,0:26:42.76:123,43,0	0/0:26,0:26:60.95:0,61,572	0/0:15,1:16:8.13:0,8,234	0/0:16,0:17:35.16:0,35,358	0/1:7,7:16:27.34:133,0,27	1/1:4,9:14:22.85:159,23,0	1/1:8,16:24:38.71:284,39,0	0/0:19,0:19:45.04:0,45,425	0/0:20,2:23:1.11:0,1,321	0/0:25,1:26:41.12:0,41,533	0/0:8,0:21:23.97:0,24,117	0/0:10,0:19:32:0,32,207	0/0:9,0:26:28.64:0,29,184	0/0:3,0:6:9.41:0,9,44
chr10	19388815	.	GTA	G	105.42	PASS	AB=0.954;AC=9;AF=0.161;AN=56;BaseQRankSum=8.418;DP=717;FS=22.870;HRun=0;HaplotypeScore=204.3937;InbreedingCoeff=0.0719;MQ=40.44;MQ0=52;MQRankSum=-8.239;QD=0.63;ReadPosRankSum=-3.176;VQSLOD=0.7862;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:9,1:10:54.82:55,0,95	0/0:11,0:10:3.84:0,4,396	0/0:25,0:3:9.03:0,9,173	0/0:30,0:2:1.88:0,2,5	0/0:22,0:21:41.13:0,41,918	0/0:19,1:19:26.67:0,27,477	0/0:34,1:26:29.67:0,30,481	0/1:28,1:4:8.05:31,0,8	0/1:12,0:9:30.02:30,0,46	0/0:35,0:30:77.53:0,78,1462	0/0:7,0:6:4.87:0,5,113	0/1:37,2:34:7:7,0,743	0/0:27,4:27:8.20:0,8,764	0/0:28,4:30:19.78:0,20,718	0/0:51,1:52:41.65:0,42,2099	0/1:31,3:29:21.47:21,0,585	0/0:38,1:35:57.83:0,58,1144	0/0:24,0:15:15:0,15,377	0/1:25,2:5:47.48:67,0,47	0/1:5,0:5:0.29:17,0,0	1/1:8,4:9:1.82:5,2,0	0/0:16,0:16:12.04:0,12,232	0/0:13,1:13:12:0,12,232	0/0:54,1:46:14.58:0,15,369	0/0:21,0:21:51.10:0,51,897	0/0:39,0:38:89.41:0,89,1836	0/0:22,1:23:60.04:0,60,1108	0/0:18,0:16:36.10:0,36,630
chr10	19388833	.	ATG	A	71.32	PASS	AB=0.930;AC=7;AF=0.125;AN=56;BaseQRankSum=9.008;DP=764;FS=24.532;HRun=0;HaplotypeScore=228.7722;InbreedingCoeff=0.1843;MQ=38.25;MQ0=84;MQRankSum=-8.434;QD=0.52;ReadPosRankSum=-1.512;VQSLOD=0.8932;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,2:16:3.76:0,4,10	0/0:11,0:10:21.07:0,21,331	0/0:13,0:7:17.61:0,18,171	0/0:15,0:2:6.02:0,6,100	0/0:29,0:27:65.98:0,66,1011	0/0:14,0:13:8.61:0,9,117	0/0:29,2:23:15.03:0,15,221	0/0:43,0:9:3.44:0,3,182	0/0:12,0:9:1.25:0,1,3	0/0:39,0:32:41.54:0,42,714	0/0:9,0:8:4.86:0,5,84	0/1:35,1:33:13.68:14,0,264	0/0:26,2:24:30.73:0,31,388	0/0:30,0:29:35.99:0,36,447	0/0:60,0:60:99:0,128,2328	0/0:24,3:25:1.12:0,1,185	0/1:27,5:30:99:129,0,379	0/1:19,1:14:21.60:22,0,154	0/0:61,0:10:7.69:0,8,104	1/1:12,1:13:4.12:12,4,0	1/1:33,2:17:0.88:2,1,0	0/0:19,2:21:6.02:0,6,82	0/0:12,1:12:12.04:0,12,191	0/0:44,5:43:8.08:0,8,140	0/0:21,0:21:45.13:0,45,757	0/0:44,1:44:95.86:0,96,1773	0/0:19,0:19:42.11:0,42,658	0/0:16,0:15:27.09:0,27,432
chr10	19388835	.	G	GTGTGTA	1198.04	PASS	AB=0.954;AC=10;AF=0.179;AN=56;BaseQRankSum=7.970;DP=766;FS=42.542;HRun=0;HaplotypeScore=256.0766;InbreedingCoeff=-0.0542;MQ=37.58;MQ0=82;MQRankSum=-7.459;QD=4.26;ReadPosRankSum=0.852;VQSLOD=1.5349;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:15:4.03:0,4,10	0/0:12,0:11:21.07:0,21,424	0/0:13,0:8:23.57:0,24,252	0/0:16,0:2:6.02:0,6,101	0/0:29,0:27:66.01:0,66,1327	0/0:12,1:12:10.13:0,10,126	0/0:33,0:23:0.99:0,1,251	0/0:46,0:10:10.69:0,11,207	0/0:12,0:9:0.89:0,1,2	0/1:38,0:32:14.01:14,0,949	0/0:10,0:9:5.97:0,6,89	0/1:35,2:33:99:280,0,299	0/1:27,2:24:75.51:76,0,427	0/1:28,3:30:44.52:45,0,485	0/0:59,0:59:99:0,142,3108	0/1:24,2:25:99:210,0,256	0/1:31,0:29:99:499,0,460	0/1:21,0:14:99:143,0,211	0/0:61,0:10:17.14:0,17,213	1/1:15,0:15:2.96:10,3,0	0/0:35,0:17:0.16:0,0,1	0/0:20,0:20:5.76:0,6,85	0/0:15,0:14:12.01:0,12,251	0/1:49,0:43:55.42:55,0,158	0/0:19,0:19:45.14:0,45,1003	0/0:44,0:43:45.58:0,46,2290	0/0:19,0:19:45.09:0,45,886	0/0:11,0:10:27.09:0,27,528
chr10	19388839	.	G	GTA	106.25	PASS	AB=0.969;AC=8;AF=0.143;AN=56;BaseQRankSum=6.681;DP=789;FS=27.175;HRun=0;HaplotypeScore=238.3329;InbreedingCoeff=0.2420;MQ=38.41;MQ0=79;MQRankSum=-5.545;QD=0.59;ReadPosRankSum=1.793;VQSLOD=1.2619;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:14:5.25:61,5,0	0/0:10,0:9:24.04:0,24,338	0/0:13,0:10:23.94:0,24,264	0/0:19,0:3:6.02:0,6,91	0/0:31,0:29:72.20:0,72,1025	0/0:12,0:12:8.79:0,9,116	0/0:32,1:23:1.06:0,1,212	0/1:57,0:12:32.07:32,0,267	1/1:13,0:9:3.01:31,3,0	0/0:40,0:33:70.08:0,70,1007	0/0:10,0:9:5.99:0,6,84	0/0:38,0:34:0.60:0,1,351	0/0:29,1:25:7.77:0,8,407	0/0:31,1:30:20.66:0,21,431	0/0:61,0:61:99:0,162,2308	0/1:26,1:25:21.73:22,0,225	0/1:28,3:29:81.51:82,0,518	0/0:19,1:13:21.20:0,21,244	0/0:61,0:10:23.85:0,24,250	0/0:13,2:15:6.98:0,7,55	0/1:36,0:18:0:0,0,0	0/0:22,0:22:5.64:0,6,90	0/0:17,0:16:11.97:0,12,183	0/0:47,2:43:10.90:0,11,141	0/0:22,0:22:54.11:0,54,761	0/0:44,0:43:99:0,121,1735	0/0:20,0:20:48.08:0,48,642	0/0:10,0:9:27.09:0,27,412
chr10	19388845	.	ATG	A	112.73	PASS	AB=0.983;AC=12;AF=0.214;AN=56;BaseQRankSum=9.335;DP=811;FS=2.724;HRun=0;HaplotypeScore=244.0454;InbreedingCoeff=0.1369;MQ=38.88;MQ0=73;MQRankSum=-7.623;QD=0.38;ReadPosRankSum=0.858;VQSLOD=2.4255;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:16,0:14:2.25:13,0,2	0/0:12,0:11:24.08:0,24,397	0/0:21,0:13:22.31:0,22,291	0/0:20,0:3:5.56:0,6,102	0/0:35,0:32:59.25:0,59,945	0/0:11,0:11:0.07:0,0,0	0/1:31,1:21:0:0,0,0	0/0:62,2:13:27.09:0,27,415	0/0:10,0:6:1.25:0,1,3	0/1:36,0:30:4.20:4,0,174	1/1:10,0:9:0.34:1,0,0	0/1:37,0:35:27.87:28,0,57	0/1:27,1:23:4.22:4,0,28	0/0:33,0:30:3.26:0,3,41	0/0:65,0:65:99:0,166,2535	0/1:30,0:28:5.86:6,0,25	0/1:31,0:29:22.58:50,0,23	0/0:17,0:11:8.69:0,9,58	0/1:57,3:10:35.11:35,0,142	1/1:13,2:15:9:96,9,0	0/0:36,4:20:1.55:0,2,40	0/0:22,0:22:1.52:0,2,4	0/0:17,0:16:2.88:0,3,24	0/0:45,1:40:4.39:0,4,35	0/0:25,0:24:53.64:0,54,847	0/0:44,0:44:99:0,118,1856	0/0:18,0:18:39.57:0,40,597	0/0:14,0:13:29.79:0,30,371
chr10	19388855	.	GTATGTGTGTGTGTGTT	G	4021.61	PASS	AB=0.875;AC=17;AF=0.304;AN=56;BaseQRankSum=3.288;DP=791;FS=0.000;HRun=0;HaplotypeScore=326.7011;InbreedingCoeff=0.2658;MQ=38.51;MQ0=63;MQRankSum=-1.657;QD=13.01;ReadPosRankSum=-3.954;VQSLOD=0.7525;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:14:10.01:0,10,43	0/0:13,0:12:30.07:0,30,1320	0/0:28,0:13:24.55:0,25,859	0/0:27,0:6:8.21:0,8,381	0/0:34,0:31:70.04:0,70,2754	0/1:7,3:10:26.87:42,0,27	1/1:29,0:19:2.71:65,3,0	0/0:66,0:11:32.22:0,32,879	0/0:9,0:4:0.47:0,0,1	1/1:28,3:26:38.96:1334,39,0	1/1:8,3:11:11.02:172,11,0	0/1:28,6:33:99:541,0,154	0/1:20,4:20:27.47:340,0,27	1/1:28,3:30:17.02:377,17,0	0/0:67,0:67:99:0,180,7385	0/1:20,5:25:67.36:227,0,67	0/1:25,1:24:99:362,0,214	0/1:20,1:14:39.20:359,0,39	0/0:49,0:9:27:0,27,501	0/0:16,0:16:5.46:0,5,24	0/0:38,0:17:9.33:0,9,102	1/1:13,5:20:1.77:151,2,0	0/0:11,3:14:0.47:0,0,2	0/1:39,1:38:46.35:52,0,46	0/0:28,0:27:66.22:0,66,2927	0/0:43,0:43:99:0,104,5620	0/0:21,0:21:33.44:0,33,1985	0/0:12,0:12:33.08:0,33,866
chr10	19388857	.	ATG	A	819.26	PASS	AB=0.866;AC=21;AF=0.389;AN=54;BaseQRankSum=11.330;DP=769;FS=6.387;HRun=0;HaplotypeScore=235.6320;InbreedingCoeff=0.3744;MQ=38.46;MQ0=61;MQRankSum=-7.450;QD=2.29;ReadPosRankSum=-1.878;VQSLOD=1.4659;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:11,4:13:0.06:0,0,0	0/0:13,0:12:27.09:0,27,448	0/0:31,0:14:38.61:0,39,495	0/0:30,0:6:11.74:0,12,171	0/0:33,0:30:59.24:0,59,932	1/1:7,3:10:2.62:8,3,0	0/0:27,1:18:2.77:0,3,14	0/0:65,0:11:28.60:0,29,401	./.	0/1:27,1:24:0.87:135,0,1	1/1:12,0:11:6.36:26,6,0	0/1:27,10:35:4.03:176,0,4	1/1:16,7:19:16.95:118,17,0	0/1:26,5:28:13.81:43,0,14	0/0:63,3:66:99:0,110,2518	0/1:18,5:23:11.45:47,0,11	0/1:15,11:25:2.19:250,0,2	0/1:15,3:13:4.15:112,0,4	0/1:46,0:9:2.77:3,0,135	1/1:16,0:16:3.64:11,4,0	0/0:36,0:17:1.55:0,2,48	1/1:22,0:22:4.93:24,5,0	0/1:13,0:12:0.11:0,0,0	1/1:18,18:35:2.75:21,3,0	0/0:28,0:27:60.18:0,60,980	0/0:42,1:43:82.20:0,82,1864	0/0:19,0:19:42.61:0,43,666	0/0:11,0:11:18.06:0,18,288
chr10	19388867	.	GTGTT	G	2184.84	PASS	AB=0.853;AC=18;AF=0.333;AN=54;BaseQRankSum=4.243;DP=759;FS=11.019;HRun=0;HaplotypeScore=249.5750;InbreedingCoeff=0.1691;MQ=39.32;MQ0=39;MQRankSum=-0.828;QD=7.09;ReadPosRankSum=-1.324;VQSLOD=0.8274;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:13:9.80:0,10,29	0/0:13,0:12:30.07:0,30,753	0/0:44,0:15:27.27:0,27,791	0/0:39,0:7:4.62:0,5,277	0/0:35,0:33:76.91:0,77,1556	0/1:8,2:10:21.67:60,0,22	1/1:10,9:10:2.99:24,3,0	0/0:56,0:10:29.99:0,30,684	./.	1/1:15,8:20:14.34:706,14,0	1/1:7,3:9:5.10:114,5,0	0/1:33,7:38:99:395,0,106	0/1:24,4:24:25.29:323,0,25	0/1:24,6:27:19.06:176,0,19	0/0:71,0:71:99:0,196,4388	0/1:20,6:26:50.17:78,0,50	0/1:22,2:22:61.45:61,0,131	0/1:13,7:15:21.27:152,0,21	0/0:27,0:8:21.49:0,21,375	0/0:15,0:15:11.53:0,12,50	0/0:34,0:16:9.87:0,10,107	1/1:14,9:23:2.89:171,3,0	1/1:10,5:15:3.23:43,3,0	0/1:38,2:38:35.52:46,0,36	0/0:27,0:26:63.17:0,63,1618	0/0:42,0:42:99:0,121,3084	0/0:22,0:22:42.40:0,42,1176	0/0:7,0:7:21.04:0,21,507
chr10	19388870	.	TTTGA	T	977.40	PASS	AB=0.979;AC=13;AF=0.241;AN=54;BaseQRankSum=5.734;DP=734;FS=0.564;HRun=0;HaplotypeScore=241.5794;InbreedingCoeff=0.0711;MQ=41.00;MQ0=33;MQRankSum=-1.471;QD=3.72;ReadPosRankSum=1.589;VQSLOD=2.5370;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:14:9.80:0,10,29	0/0:13,0:12:30.10:0,30,822	0/0:48,0:17:39.98:0,40,898	0/1:43,0:8:4.25:4,0,295	0/0:34,0:32:71.43:0,71,1666	0/1:10,0:10:20.82:21,0,26	0/0:16,0:9:3.32:0,3,21	0/0:51,0:10:29.97:0,30,687	./.	1/1:21,0:19:25.59:429,26,0	1/1:11,1:11:4.55:63,5,0	0/1:37,0:35:57.23:234,0,57	0/1:26,0:22:15.88:144,0,16	0/1:22,2:21:24.87:64,0,25	0/0:68,0:68:99:0,169,4654	0/1:25,1:26:19.91:20,0,48	0/1:21,0:19:30.25:30,0,56	0/1:19,0:14:32.89:49,0,33	0/0:26,0:8:20.26:0,20,347	0/0:13,0:13:11.25:0,11,46	0/0:28,0:12:9.66:0,10,99	0/1:22,2:24:0.98:72,0,1	0/0:17,0:16:2.50:0,3,7	0/0:38,0:36:0.70:0,1,29	0/0:28,0:27:66.22:0,66,1782	0/0:43,0:43:99:0,108,3241	0/0:21,0:21:56.37:0,56,1347	0/0:7,0:7:21.07:0,21,558
chr10	19388884	.	TGA	T	262.06	PASS	AB=0.931;AC=15;AF=0.278;AN=54;BaseQRankSum=10.245;DP=723;FS=47.477;HRun=0;HaplotypeScore=234.9203;InbreedingCoeff=0.0239;MQ=41.06;MQ0=36;MQRankSum=-8.048;QD=0.86;ReadPosRankSum=-3.418;VQSLOD=0.7580;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,1:15:2.61:0,3,15	0/0:13,0:13:33.09:0,33,568	0/0:41,0:11:24.86:0,25,342	0/1:39,0:6:0.76:1,0,137	0/0:37,0:35:74.25:0,74,1357	0/1:12,1:12:21.82:22,0,57	0/0:16,0:10:9.31:0,9,101	./.	0/0:5,0:2:5.73:0,6,35	0/0:28,0:25:26.64:0,27,541	0/0:15,0:13:12:0,12,134	0/1:33,5:37:57.41:57,0,237	0/1:27,2:26:13.97:14,0,256	0/1:24,1:23:13.59:14,0,161	0/0:60,0:60:99:0,119,2556	0/1:28,2:29:5.37:5,0,199	0/1:23,2:22:99:115,0,127	0/1:23,1:17:52:52,0,148	1/1:11,0:1:2.98:22,3,0	1/1:10,0:10:5.16:25,5,0	1/1:15,0:7:0.89:3,1,0	0/0:29,0:27:17.98:0,18,218	0/0:21,0:20:8.87:0,9,96	0/1:36,5:38:75.08:75,0,112	0/0:28,0:27:59.94:0,60,1045	0/0:41,1:41:74.42:0,74,2004	0/0:24,0:23:46.25:0,46,862	0/0:10,0:10:29.73:0,30,435
chr10	19388898	.	AGT	A	4605.48	PASS	AB=0.743;AC=32;AF=0.640;AN=50;BaseQRankSum=10.070;DP=708;FS=1.405;HRun=0;HaplotypeScore=213.8165;InbreedingCoeff=0.7396;MQ=43.47;MQ0=25;MQRankSum=-3.424;QD=11.10;ReadPosRankSum=-0.226;VQSLOD=4.5684;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,11:15:2.98:39,3,0	0/0:15,0:14:33.07:0,33,482	0/0:38,0:10:17.31:0,17,195	0/0:44,0:9:20.41:0,20,244	0/0:40,0:38:77.32:0,77,1241	1/1:11,6:16:14.93:177,15,0	1/1:12,10:15:18.05:230,18,0	./.	1/1:0,7:5:6.02:77,6,0	1/1:7,27:31:69.22:877,69,0	1/1:5,12:15:12.03:154,12,0	1/1:16,21:36:47.80:593,48,0	1/1:5,26:29:41.64:508,42,0	1/1:5,22:26:30.08:371,30,0	0/0:47,0:47:99:0,120,1891	1/1:4,34:37:23.95:309,24,0	1/1:14,10:22:18.18:376,18,0	0/1:7,19:19:62.43:223,0,62	./.	1/1:5,0:5:2.21:7,2,0	./.	1/1:5,28:31:17.55:231,18,0	1/1:3,22:23:8.96:116,9,0	1/1:24,20:41:23.46:305,23,0	0/0:29,0:28:60.18:0,60,929	0/0:44,0:43:91.76:0,92,1767	0/0:19,0:18:34.06:0,34,558	0/1:9,1:10:11.47:11,0,377
chr10	19388935	.	TTG	T	307.55	PASS	AB=0.655;AC=5;AF=0.089;AN=56;BaseQRankSum=-0.240;DP=837;FS=2.182;HRun=0;HaplotypeScore=241.1940;InbreedingCoeff=0.6523;MQ=41.77;MQ0=39;MQRankSum=-4.505;QD=9.05;ReadPosRankSum=-1.229;VQSLOD=3.3060;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:25:36.10:0,36,411	0/0:17,0:16:27.09:0,27,432	0/0:43,0:14:23.56:0,24,341	0/0:49,0:17:28.31:0,28,421	0/0:33,0:32:59.98:0,60,904	0/0:19,0:18:45.13:0,45,605	0/0:26,0:23:51.17:0,51,809	0/1:9,10:15:99:312,0,103	0/0:24,0:19:33.09:0,33,383	0/0:43,0:37:81.24:0,81,1339	0/0:26,0:24:51.16:0,51,723	0/0:49,0:42:93.08:0,93,1500	0/0:36,0:35:66.63:0,67,1212	0/0:32,0:30:56.67:0,57,896	0/0:39,0:38:84.27:0,84,1378	0/0:46,0:40:74.40:0,74,1055	0/0:21,0:18:39.13:0,39,636	0/0:28,0:24:44.47:0,44,717	1/1:6,2:3:2.99:23,3,0	1/1:4,3:6:11.16:85,11,0	0/0:15,2:8:0:0,0,0	0/0:37,0:32:50.94:0,51,678	0/0:39,0:35:42.07:0,42,555	0/0:38,0:34:59.31:0,59,739	0/0:37,0:34:57.08:0,57,837	0/0:41,0:38:99:0,101,1661	0/0:21,0:20:53.97:0,54,814	0/0:15,0:15:30.03:0,30,477
chr10	19388971	.	A	ATG	586.54	PASS	AB=0.886;AC=4;AF=0.077;AN=52;BaseQRankSum=0.255;DP=857;FS=3.158;HRun=0;HaplotypeScore=182.9029;InbreedingCoeff=0.4665;MQ=36.11;MQ0=136;MQRankSum=1.498;QD=6.11;ReadPosRankSum=1.927;VQSLOD=3.4336;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:26:0:0,0,0	0/0:16,0:15:27.09:0,27,340	./.	./.	0/0:31,1:29:45.02:0,45,559	0/0:15,0:14:21.07:0,21,271	0/0:42,0:27:5.64:0,6,135	0/0:66,0:9:26.95:0,27,262	1/1:23,0:18:5.98:60,6,0	0/0:46,0:32:26.95:0,27,464	0/0:21,0:19:18.94:0,19,235	0/0:31,0:24:42.12:0,42,522	0/0:26,0:26:34.93:0,35,444	0/0:25,0:24:24.07:0,24,296	0/1:31,13:42:99:619,0,480	0/0:39,0:30:26.94:0,27,333	0/0:23,0:15:21.07:0,21,262	0/0:21,0:17:27.09:0,27,349	0/0:55,0:3:8.94:0,9,82	0/0:16,0:12:6.10:0,6,49	0/0:30,0:12:0:0,0,0	0/0:39,0:28:11.50:0,11,141	0/0:34,0:29:8.73:0,9,115	0/0:28,0:20:15.03:0,15,177	0/0:35,0:28:29.76:0,30,342	0/0:43,0:31:90.29:0,90,1156	0/0:22,0:19:36.11:0,36,456	0/0:12,0:12:30.08:0,30,374
chr10	19388981	.	ATG	A	1705.52	PASS	AB=0.922;AC=21;AF=0.404;AN=52;BaseQRankSum=5.554;DP=875;FS=45.783;HRun=0;HaplotypeScore=207.8224;InbreedingCoeff=0.7187;MQ=36.41;MQ0=140;MQRankSum=3.501;QD=5.57;ReadPosRankSum=2.258;VQSLOD=1.6086;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:27:0:0,0,0	0/0:19,0:17:24.02:0,24,351	./.	./.	0/0:37,0:33:45.03:0,45,690	1/1:16,0:16:17.91:160,18,0	0/0:38,0:23:0.91:0,1,94	0/0:72,0:9:7.96:0,8,114	0/0:23,0:18:2.90:0,3,16	0/1:43,4:29:80.55:219,0,81	1/1:20,2:21:17.47:119,17,0	1/1:28,1:22:38.12:281,38,0	1/1:26,1:24:36.71:302,37,0	1/1:19,2:20:23.81:185,24,0	0/0:56,0:54:26.66:0,27,1172	1/1:34,4:28:26.61:195,27,0	1/1:21,0:14:9.43:71,9,0	1/1:17,0:16:26.48:202,26,0	0/0:58,0:3:6.02:0,6,94	0/0:18,0:14:10:0,10,73	0/0:32,0:13:0:0,0,0	1/1:36,3:28:14.83:150,15,0	0/0:34,4:34:5.62:0,6,35	1/1:27,2:22:1.91:7,2,0	0/0:36,1:30:31.05:0,31,418	0/0:53,1:40:47.73:0,48,1388	0/0:22,0:19:30.10:0,30,509	0/0:13,0:13:29.44:0,29,434
chr10	19388991	.	GTA	G	3060.84	PASS	AB=0.885;AC=21;AF=0.404;AN=52;BaseQRankSum=0.902;DP=851;FS=41.820;HRun=0;HaplotypeScore=216.6006;InbreedingCoeff=0.2257;MQ=36.93;MQ0=125;MQRankSum=0.968;QD=6.47;ReadPosRankSum=-0.386;VQSLOD=1.3212;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:26:0:0,0,0	0/0:18,0:16:30.08:0,30,477	./.	./.	0/0:41,0:37:34.88:0,35,708	1/1:9,3:12:20.70:235,21,0	0/1:35,1:20:20.48:20,0,140	0/0:61,0:6:17.70:0,18,113	0/0:19,0:15:2.94:0,3,18	0/1:40,8:30:99:314,0,181	0/1:20,9:27:21.33:206,0,21	1/1:11,17:21:38.89:540,39,0	1/1:16,11:23:27.06:468,27,0	0/1:17,5:21:42.47:299,0,42	0/0:62,0:60:99:0,115,1589	0/1:23,13:26:0.46:334,0,0	1/1:20,3:15:14.60:168,15,0	1/1:8,6:12:29.93:425,30,0	0/0:47,0:3:6.02:0,6,92	0/1:17,0:13:0.67:1,0,99	0/0:30,0:13:0:0,0,0	0/1:34,7:30:28.58:157,0,29	0/1:32,5:33:0.30:0,0,33	0/1:25,5:22:34.84:35,0,36	0/1:44,0:38:25.07:25,0,525	0/0:49,1:39:54.46:0,54,1576	0/0:24,0:21:41.66:0,42,624	0/0:14,0:13:25.87:0,26,471
chr10	19388999	.	GTA	G	987.11	PASS	AB=0.990;AC=29;AF=0.558;AN=52;BaseQRankSum=2.742;DP=870;FS=4.953;HRun=0;HaplotypeScore=242.3023;InbreedingCoeff=0.3378;MQ=36.94;MQ0=112;MQRankSum=-1.666;QD=1.77;ReadPosRankSum=-6.148;VQSLOD=0.5890;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:24,2:22:0:0,0,0	0/0:19,0:18:11.98:0,12,348	./.	./.	0/0:42,1:38:29.75:0,30,476	0/1:9,0:9:1.47:21,0,1	0/1:38,0:22:41.86:42,0,82	0/1:61,0:7:37.10:37,0,50	1/1:15,3:14:2.91:18,3,0	0/1:53,0:33:65.08:248,0,65	1/1:30,0:28:4.99:56,5,0	1/1:29,0:22:0.71:50,1,0	1/1:27,0:22:2.31:56,2,0	1/1:21,0:19:10.42:101,10,0	0/0:67,0:65:47.51:0,48,2185	1/1:30,1:21:18.98:212,19,0	1/1:25,0:17:7.03:32,7,0	0/1:15,0:12:1.28:19,0,1	0/0:39,0:3:3.84:0,4,21	1/1:18,0:14:3.07:37,3,0	0/0:31,0:15:0:0,0,0	1/1:43,0:32:15.12:91,15,0	1/1:37,0:32:13.33:64,13,0	1/1:28,0:20:5.62:29,6,0	0/1:48,0:42:37.78:38,0,414	0/0:56,0:44:37.33:0,37,1214	0/0:27,0:24:25.89:0,26,415	0/0:16,0:14:14.10:0,14,212
chr10	19389001	.	ATG	A	2310.06	PASS	AB=0.885;AC=24;AF=0.462;AN=52;BaseQRankSum=-2.651;DP=884;FS=28.826;HRun=0;HaplotypeScore=242.5774;InbreedingCoeff=-0.4458;MQ=37.12;MQ0=112;MQRankSum=-1.459;QD=3.34;ReadPosRankSum=-6.396;VQSLOD=0.0490;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:23:0:0,0,0	0/1:19,1:19:13.34:13,0,130	./.	./.	0/1:42,2:39:40.49:40,0,150	0/1:7,3:9:37.02:66,0,37	0/1:36,4:24:47.28:173,0,47	0/0:58,0:7:2.98:0,3,21	0/1:16,0:12:0:0,0,0	0/1:46,8:33:99:403,0,132	0/1:23,9:30:58.28:153,0,58	0/1:26,5:24:99:108,0,191	0/1:23,7:25:99:152,0,175	0/1:16,4:18:50.24:207,0,50	0/1:65,4:67:41.57:42,0,2093	0/1:24,6:20:49.53:289,0,50	0/1:18,6:16:13.50:72,0,14	0/1:14,1:12:10.63:11,0,151	0/0:41,0:3:5.95:0,6,42	1/1:16,2:14:13.43:90,13,0	0/0:30,1:15:0:0,0,0	0/1:30,12:32:10.78:156,0,11	1/1:29,9:33:11.77:153,12,0	1/1:14,14:20:5.89:78,6,0	0/1:44,2:41:88.39:88,0,129	0/1:52,3:45:94.47:94,0,532	0/1:29,0:26:64.67:65,0,99	0/0:16,0:14:6.61:0,7,30
chr10	19389011	.	GTA	G	1702.21	PASS	AB=0.994;AC=25;AF=0.446;AN=56;BaseQRankSum=-0.087;DP=918;FS=10.524;HRun=0;HaplotypeScore=244.1428;InbreedingCoeff=-0.3748;MQ=37.89;MQ0=104;MQRankSum=1.407;QD=2.38;ReadPosRankSum=7.768;VQSLOD=0.5348;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:16:0:0,0,0	0/1:21,0:20:42.76:90,0,43	1/1:20,0:1:2.37:8,2,0	0/0:21,0:2:0.89:0,1,2	0/1:53,0:47:99:162,0,123	0/1:15,0:14:17.32:17,0,76	0/1:47,0:31:38.25:48,0,38	0/1:42,0:5:1.97:2,0,11	0/1:13,0:9:0.01:0,0,0	0/1:59,1:38:99:139,0,250	0/1:30,0:29:40.02:40,0,42	0/1:28,0:25:16.66:17,0,258	0/1:30,0:25:49.15:49,0,171	0/1:21,0:18:78.02:78,0,81	0/0:72,0:71:77.22:0,77,2432	0/1:30,0:23:96.88:97,0,113	0/0:28,0:20:10.99:0,11,106	0/1:14,0:11:1.36:1,0,143	0/0:32,0:3:4.21:0,4,23	1/1:15,3:14:14.29:125,14,0	0/0:28,1:15:0:0,0,0	0/1:48,0:36:39.05:39,0,83	0/1:41,0:36:25.78:47,0,26	1/1:31,0:24:5.60:30,6,0	0/1:49,0:44:18.39:179,0,18	0/1:59,0:51:99:384,0,206	0/1:29,1:26:10.44:222,0,10	0/1:13,1:12:9.80:71,0,10
chr10	19389013	.	ATG	A	2542.40	PASS	AB=0.678;AC=9;AF=0.161;AN=56;BaseQRankSum=-4.823;DP=927;FS=0.000;HRun=0;HaplotypeScore=243.9314;InbreedingCoeff=0.1112;MQ=38.97;MQ0=100;MQRankSum=1.049;QD=9.97;ReadPosRankSum=7.058;VQSLOD=2.5147;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:16:0:0,0,0	0/1:9,12:20:99:242,0,138	0/0:22,0:2:1.11:0,1,7	0/0:26,0:3:5.99:0,6,65	0/1:21,31:47:99:403,0,260	0/0:15,0:14:10.63:0,11,88	0/0:49,0:33:15.91:0,16,101	0/0:42,0:5:5.11:0,5,54	0/1:9,1:6:0.01:0,0,0	0/0:64,0:42:53.99:0,54,587	0/0:31,0:30:12.94:0,13,55	0/0:29,0:26:27.96:0,28,204	0/0:30,0:25:16.46:0,16,90	0/0:21,0:18:16.62:0,17,120	0/0:70,0:69:99:0,154,2334	0/0:28,0:23:33.49:0,33,198	0/0:29,0:21:25.49:0,25,231	0/0:14,0:11:16.80:0,17,155	0/0:31,0:3:5.65:0,6,31	1/1:17,1:14:8.19:76,8,0	0/0:28,0:15:0:0,0,0	0/0:46,2:37:18.73:0,19,168	0/0:41,0:36:15.75:0,16,122	0/0:31,0:24:5.19:0,5,20	0/1:21,29:45:99:448,0,118	0/1:29,31:52:99:908,0,260	0/1:17,13:26:34.44:422,0,34	0/1:4,9:12:37.55:174,0,38
chr10	19389025	.	A	ATG	67.43	PASS	AB=0.975;AC=6;AF=0.107;AN=56;BaseQRankSum=3.645;DP=960;FS=2.537;HRun=0;HaplotypeScore=267.7959;InbreedingCoeff=0.4281;MQ=39.09;MQ0=75;MQRankSum=-3.689;QD=0.54;ReadPosRankSum=-2.305;VQSLOD=1.9025;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:17,0:14:0:0,0,0	0/0:20,0:19:40.22:0,40,451	0/0:40,0:3:3.98:0,4,72	0/0:48,0:7:12.34:0,12,129	0/0:54,0:49:74.85:0,75,865	0/0:16,0:15:15.03:0,15,176	0/0:49,0:36:15.14:0,15,262	0/1:35,2:5:13.01:91,0,13	0/0:5,0:4:0:0,0,0	0/0:61,0:45:96.28:0,96,1169	0/0:31,0:29:21.63:0,22,269	0/0:32,0:29:24.04:0,24,300	0/0:25,0:20:24.02:0,24,280	0/0:24,0:21:29.57:0,30,325	0/0:75,0:74:99:0,180,2218	0/0:31,0:26:33.95:0,34,404	0/0:29,0:23:25.99:0,26,311	0/0:12,0:9:16.56:0,17,175	0/1:31,0:5:8.96:9,0,65	1/1:14,4:17:10.40:71,10,0	0/1:19,1:14:0.02:0,0,0	0/0:50,0:42:32.93:0,33,384	0/0:40,0:34:13.99:0,14,223	0/0:39,0:33:11.90:0,12,137	0/0:48,0:45:78.19:0,78,922	0/0:54,0:49:99:0,132,1568	0/0:31,0:28:56.91:0,57,640	0/0:18,0:16:3.35:0,3,297
chr10	19389042	.	AGT	A	5097.27	PASS	AB=0.830;AC=24;AF=0.429;AN=56;BaseQRankSum=5.798;DP=1060;FS=0.700;HRun=0;HaplotypeScore=311.9838;InbreedingCoeff=-0.5336;MQ=40.01;MQ0=35;MQRankSum=-4.289;QD=6.16;ReadPosRankSum=-3.152;VQSLOD=3.3967;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:17,1:16:0:0,0,0	0/1:13,6:18:99:151,0,387	0/0:56,0:7:15.03:0,15,225	0/0:60,1:9:21.07:0,21,318	0/1:53,17:64:99:687,0,751	0/1:17,3:18:37.73:38,0,488	0/1:34,9:40:99:192,0,826	0/1:30,5:8:15.39:139,0,15	0/1:5,0:6:0.30:0,0,0	0/1:54,15:60:99:371,0,1479	0/1:19,13:31:99:339,0,579	0/1:27,7:32:99:127,0,883	0/1:32,6:31:99:159,0,829	0/1:28,6:31:99:142,0,829	0/0:78,1:79:99:0,166,3238	0/1:34,9:39:97.63:98,0,990	0/1:30,3:28:99:159,0,653	0/1:14,4:15:99:136,0,282	0/0:22,1:5:6.02:0,6,82	1/1:13,6:16:14.87:138,15,0	0/0:11,2:7:0:0,0,0	0/1:37,13:47:99:300,0,1045	0/1:23,15:35:99:333,0,509	0/1:38,9:43:99:131,0,689	0/1:30,15:42:99:508,0,662	0/1:44,17:56:99:544,0,1333	0/1:29,7:34:99:330,0,612	0/1:16,1:16:75.90:76,0,343
chr10	19389053	.	GTA	G	1748.29	PASS	AB=0.991;AC=24;AF=0.429;AN=56;BaseQRankSum=9.791;DP=1205;FS=4.897;HRun=0;HaplotypeScore=365.3482;InbreedingCoeff=-0.5156;MQ=38.68;MQ0=46;MQRankSum=-5.067;QD=1.81;ReadPosRankSum=-0.252;VQSLOD=0.9688;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:19,0:16:0.12:0,0,0	0/1:21,0:20:31.14:31,0,443	0/0:49,0:9:14.38:0,14,296	0/0:60,0:13:17.59:0,18,346	0/1:66,0:61:99:203,0,843	0/1:26,0:21:21.86:22,0,551	0/1:50,2:45:52.37:52,0,921	0/1:31,0:5:5.16:60,0,5	0/1:7,0:7:0.30:0,0,0	0/1:98,0:75:99:129,0,1916	0/1:39,0:37:99:143,0,663	0/1:43,0:41:69.32:69,0,978	0/1:56,0:45:60.24:60,0,1016	0/1:41,0:37:99:118,0,853	0/0:81,0:80:99:0,203,3601	0/1:50,0:46:67.54:68,0,1104	0/1:32,4:31:99:131,0,730	0/1:20,0:18:75.25:75,0,261	0/0:30,0:5:5.96:0,6,43	1/1:22,0:19:17.20:102,17,0	0/0:16,0:8:0:0,0,0	0/1:63,1:60:99:119,0,1254	0/1:47,0:40:99:146,0,566	0/1:50,3:49:52.26:52,0,746	0/1:45,0:41:99:142,0,741	0/1:70,0:65:80.87:81,0,1483	0/1:44,0:39:78.54:79,0,671	0/1:18,0:17:16.58:17,0,377
chr10	19389055	.	ATG	A	45.09	PASS	AB=1.000;AC=7;AF=0.130;AN=54;BaseQRankSum=12.489;DP=1222;FS=0.000;HRun=0;HaplotypeScore=378.7893;InbreedingCoeff=0.6036;MQ=38.46;MQ0=47;MQRankSum=-10.118;QD=0.38;ReadPosRankSum=-3.819;VQSLOD=0.8542;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:20,0:17:0.12:1,0,0	0/0:22,0:21:37.56:0,38,486	0/0:48,0:10:25.32:0,25,349	0/0:61,2:15:35.54:0,36,468	0/0:63,2:60:57.76:0,58,963	0/0:27,0:22:28.86:0,29,493	0/0:54,0:46:56.89:0,57,817	1/1:29,0:5:0.43:1,0,0	0/1:10,0:7:0.30:0,0,0	0/0:100,1:77:99:0,142,2115	0/0:39,0:37:21.48:0,21,596	0/0:44,0:42:60.50:0,60,875	0/0:56,0:45:75.56:0,76,1028	0/0:44,0:40:53.14:0,53,858	0/0:76,0:75:99:0,201,3119	0/0:52,0:47:69.50:0,69,1034	0/1:36,0:31:15.05:15,0,721	0/0:21,0:19:30.69:0,31,389	./.	1/1:16,7:20:11.94:126,12,0	0/0:14,1:7:0:0,0,0	0/0:62,2:60:51.10:0,51,1141	0/0:48,0:41:21.45:0,21,545	0/0:55,0:49:24.23:0,24,606	0/0:45,0:41:70.41:0,70,855	0/0:72,1:68:99:0,142,1784	0/0:44,0:39:59.18:0,59,740	0/0:18,0:17:29.74:0,30,383
chr10	19389077	.	ATG	A	2403.21	PASS	AB=0.827;AC=15;AF=0.288;AN=52;BaseQRankSum=2.016;DP=1311;FS=0.000;HRun=0;HaplotypeScore=394.3183;InbreedingCoeff=-0.2907;MQ=37.09;MQ0=68;MQRankSum=-4.312;QD=3.15;ReadPosRankSum=-3.209;VQSLOD=0.8886;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:16,1:14:1.30:0,1,5	0/0:24,0:22:36.11:0,36,576	0/0:58,0:14:30.10:0,30,482	0/0:63,2:17:42.11:0,42,674	0/0:65,1:61:88.68:0,89,1476	0/1:30,4:27:9.63:10,0,436	0/1:77,4:58:64.58:65,0,609	./.	1/1:10,3:11:2.59:18,3,0	0/1:92,24:88:99:667,0,2112	0/1:32,17:44:99:241,0,218	0/1:40,17:53:99:325,0,653	0/1:46,17:52:99:282,0,673	0/1:44,8:41:86.22:86,0,785	0/0:66,0:63:99:0,138,2293	0/1:45,12:54:99:170,0,808	0/1:30,6:34:99:108,0,612	0/1:17,6:18:99:128,0,376	0/0:18,0:1:3.01:0,3,49	0/0:20,0:21:4.90:0,5,18	./.	0/1:52,15:61:99:142,0,668	0/1:37,16:46:99:150,0,517	0/1:47,11:54:99:160,0,346	0/0:41,0:40:75.18:0,75,1212	0/0:70,0:58:99:0,132,2194	0/0:45,1:40:66.23:0,66,1129	0/0:17,0:15:21.94:0,22,381
chr10	19389097	.	A	ATG	31.18	PASS	AB=0.976;AC=8;AF=0.143;AN=56;BaseQRankSum=7.180;DP=1255;FS=46.663;HRun=0;HaplotypeScore=367.6573;InbreedingCoeff=0.2896;MQ=34.46;MQ0=89;MQRankSum=-5.397;QD=0.17;ReadPosRankSum=-2.985;VQSLOD=0.6690;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:11:2.64:11,3,0	0/0:20,0:19:20.85:0,21,279	0/0:61,0:13:20.28:0,20,240	0/0:60,0:16:27:0,27,309	0/0:54,0:50:70.40:0,70,928	0/0:34,1:29:22.41:0,22,352	0/0:72,2:52:32.63:0,33,444	0/0:26,3:4:3.01:0,3,35	1/1:23,2:18:4.36:32,4,0	0/0:109,0:80:99:0,172,2311	0/0:40,0:35:29.93:0,30,398	0/0:59,0:53:60.11:0,60,824	0/1:60,0:51:12.51:13,0,688	0/0:55,0:42:44.72:0,45,590	0/0:57,1:53:93.07:0,93,1190	0/0:68,0:58:59.63:0,60,795	0/1:32,2:32:7.49:7,0,453	0/1:24,0:20:80.02:80,0,285	0/0:25,0:3:6.02:0,6,80	0/1:22,0:20:6.11:6,0,35	0/0:12,2:6:0:0,0,0	0/0:62,0:55:50.29:0,50,649	0/0:41,0:37:38.22:0,38,471	0/0:48,0:45:25.53:0,26,353	0/0:27,0:26:42.14:0,42,552	0/0:58,1:46:99:0,99,1299	0/0:49,0:40:31.29:0,31,504	0/0:13,0:11:21.07:0,21,279
chr10	19389147	.	GTGA	G	1244.04	PASS	AB=0.936;AC=35;AF=0.673;AN=52;BaseQRankSum=-2.333;DP=344;FS=2.311;HRun=0;HaplotypeScore=106.7921;InbreedingCoeff=0.1943;MQ=40.71;MQ0=13;MQRankSum=-2.387;QD=4.57;ReadPosRankSum=-3.992;VQSLOD=0.4606;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:9,1:4:2.76:14,3,0	1/1:2,7:8:2.97:41,3,0	0/0:15,0:1:0:0,0,0	0/0:13,0:6:8.39:0,8,74	1/1:8,4:12:5.99:82,6,0	1/1:6,0:4:3.01:37,3,0	0/1:8,2:6:0:0,0,0	./.	1/1:16,0:11:2.97:32,3,0	1/1:23,0:16:12.34:259,12,0	0/1:9,2:8:6.17:44,0,6	1/1:26,0:20:2.75:143,3,0	0/1:13,0:11:0.34:20,0,0	1/1:23,0:14:1.35:59,1,0	1/1:17,0:15:2.73:61,3,0	0/1:25,0:21:13.58:70,0,14	1/1:13,1:13:9.84:55,10,0	1/1:9,0:9:7.99:81,8,0	0/1:5,0:4:1.97:36,0,2	0/0:6,1:7:1.34:0,1,5	0/0:4,0:3:0:0,0,0	1/1:12,0:10:1.65:49,2,0	0/0:9,2:11:1.36:0,1,4	0/0:12,3:12:1.11:0,1,4	1/1:1,3:4:0.47:1,0,0	1/1:8,1:5:12.04:168,12,0	1/1:3,11:11:5.99:102,6,0	./.
chr10	19389148	.	TG	T	919.40	PASS	AB=1.000;AC=43;AF=0.896;AN=48;BaseQRankSum=0.485;DP=330;FS=7.511;HRun=1;HaplotypeScore=101.9676;InbreedingCoeff=0.2456;MQ=41.01;MQ0=11;MQRankSum=-1.914;QD=3.24;ReadPosRankSum=1.284;VQSLOD=-0.1152;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,0:4:2.22:8,2,0	0/1:9,0:8:15.56:16,0,19	./.	0/0:11,2:6:4.73:0,5,77	1/1:12,0:12:5.37:34,5,0	1/1:5,0:3:2.94:18,3,0	0/0:9,1:6:2.99:0,3,24	./.	1/1:12,3:11:2.88:15,3,0	1/1:22,0:15:14.98:218,15,0	1/1:11,0:8:8.09:42,8,0	1/1:25,1:20:17.30:111,17,0	1/1:12,0:10:4.28:21,4,0	1/1:20,2:14:6.34:36,6,0	1/1:17,0:15:6.14:36,6,0	1/1:21,3:20:14.61:91,15,0	1/1:11,2:12:11.26:73,11,0	1/1:11,2:9:16.11:109,16,0	1/1:4,0:4:5.96:44,6,0	1/1:7,0:7:2.96:21,3,0	./.	1/1:10,0:8:4.76:24,5,0	1/1:11,0:11:3.41:19,3,0	1/1:15,0:12:2.48:18,2,0	1/1:3,0:3:0.47:1,0,0	1/1:8,1:5:10.79:58,11,0	1/1:14,0:11:4.90:18,5,0	./.
chr10	19389149	.	GA	G	2114.28	PASS	AB=0.846;AC=45;AF=0.978;AN=46;BaseQRankSum=-1.523;DP=316;FS=7.361;HRun=1;HaplotypeScore=93.9655;InbreedingCoeff=0.0921;MQ=41.48;MQ0=9;MQRankSum=-1.195;QD=7.32;ReadPosRankSum=-1.941;VQSLOD=-0.2566;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,4:4:2.74:13,3,0	1/1:7,0:7:3.01:41,3,0	./.	0/1:9,2:5:3.71:4,0,70	1/1:5,1:12:5.54:82,6,0	1/1:0,5:3:3.01:37,3,0	./.	./.	1/1:3,8:11:4.56:36,5,0	1/1:2,16:14:36:432,36,0	1/1:2,9:8:9.02:110,9,0	1/1:5,16:20:17.68:244,18,0	1/1:5,6:10:8.73:78,9,0	1/1:5,11:13:9.02:108,9,0	1/1:2,11:15:8.82:108,9,0	1/1:3,11:18:11.14:165,11,0	1/1:4,9:12:11.67:125,12,0	1/1:3,8:9:17.79:148,18,0	1/1:1,3:4:6.02:83,6,0	1/1:1,5:6:2.99:42,3,0	./.	1/1:0,9:8:5.62:68,6,0	1/1:2,7:11:3.48:43,3,0	1/1:6,6:12:2.51:41,3,0	1/1:3,0:3:0.47:1,0,0	1/1:2,5:5:12.02:146,12,0	1/1:11,2:11:5.94:46,6,0	./.
chr10	19389337	.	TGAGA	T	144.82	PASS	AB=0.878;AC=15;AF=0.417;AN=36;BaseQRankSum=1.223;DP=173;FS=21.100;HRun=0;HaplotypeScore=46.6911;InbreedingCoeff=0.1855;MQ=55.43;MQ0=18;MQRankSum=-3.478;QD=1.52;ReadPosRankSum=1.251;VQSLOD=0.1373;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:4,2:6:0.42:0,0,1	0/0:3,0:2:2.50:0,2,9	0/0:26,0:7:1.88:0,2,89	0/1:12,0:4:1.59:2,0,2	0/0:2,0:1:3.01:0,3,59	1/1:1,0:1:2.60:10,3,0	0/1:5,1:4:0:0,0,0	0/0:16,0:14:38.13:0,38,575	./.	1/1:3,0:1:2.99:24,3,0	./.	./.	1/1:0,0:1:2.90:16,3,0	./.	./.	./.	./.	1/1:5,0:3:5.99:68,6,0	0/1:12,0:10:34.31:36,0,34	0/0:9,0:8:0.59:0,1,2	0/1:25,1:18:0:0,0,0	./.	0/0:1,0:1:3.01:0,3,52	0/1:12,0:9:0:0,0,0	./.	0/1:4,3:5:85.68:88,0,86	0/1:2,1:2:0.51:1,0,33	./.
chr10	19389348	.	GTGTATGTGTA	G	984.01	PASS	AB=1.000;AC=22;AF=0.423;AN=52;BaseQRankSum=-2.717;DP=514;FS=0.000;HRun=0;HaplotypeScore=121.3159;InbreedingCoeff=0.1353;MQ=32.35;MQ0=64;MQRankSum=1.915;QD=3.08;ReadPosRankSum=1.915;VQSLOD=2.0850;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:9:0.47:0,0,1	0/0:10,0:8:2.57:0,3,15	0/1:29,0:7:11.65:12,0,24	0/0:12,0:2:0.47:0,0,1	0/0:13,0:10:3.93:0,4,24	1/1:8,0:5:2.60:10,3,0	1/1:27,0:18:5.60:20,6,0	1/1:25,14:16:25.57:781,26,0	./.	0/0:24,0:13:1.86:0,2,105	0/0:17,0:14:0:0,0,1	1/1:23,0:14:7.95:36,8,0	0/1:19,0:12:18.38:44,0,18	0/1:23,0:15:5.54:6,0,7	0/0:19,0:14:0.47:0,0,2	1/1:15,0:9:2.24:11,2,0	1/1:8,0:6:3:27,3,0	0/1:13,0:8:9.38:9,0,61	0/1:25,0:13:45.69:46,0,78	1/1:17,0:15:6.02:86,6,0	1/1:51,0:26:2.41:6,2,0	0/0:17,0:7:0.47:0,0,1	0/0:12,0:8:3.43:0,3,20	./.	0/0:10,0:7:0.89:0,1,3	0/1:21,0:14:22.49:22,0,106	0/0:8,0:7:5.72:0,6,30	0/0:2,0:2:5.06:0,5,21
chr10	19389356	.	GTA	G	473.39	PASS	AB=0.887;AC=26;AF=0.481;AN=54;BaseQRankSum=0.057;DP=702;FS=1.051;HRun=0;HaplotypeScore=146.2870;InbreedingCoeff=0.2069;MQ=22.32;MQ0=118;MQRankSum=-0.086;QD=1.00;ReadPosRankSum=0.192;VQSLOD=2.4339;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:12:0.36:1,0,0	0/0:5,6:9:2.51:0,3,11	0/0:21,0:3:2.96:0,3,19	0/0:11,0:1:1.25:0,1,3	0/0:12,8:15:2.22:0,2,8	1/1:14,1:12:2.49:9,2,0	0/1:31,3:19:0.40:0,0,1	1/1:53,1:16:5.70:122,6,0	./.	0/1:35,2:18:46.99:47,0,120	0/0:23,2:17:0:0,0,0	1/1:22,12:21:5.71:51,6,0	1/1:27,3:18:14.59:60,15,0	1/1:32,2:20:2.48:16,2,0	1/1:26,6:24:0.77:2,1,0	1/1:22,5:16:1.81:5,2,0	1/1:8,2:8:2.73:14,3,0	0/1:20,1:14:15.22:50,0,15	0/0:28,0:12:2.85:0,3,37	0/0:18,3:18:0.75:0,1,3	1/1:57,3:30:5.14:15,5,0	0/0:16,6:9:0:0,0,0	0/0:17,2:13:0.43:0,0,1	0/1:30,3:18:0:0,0,0	0/0:7,10:14:0.93:0,1,2	0/1:24,6:16:99:186,0,112	0/0:6,4:8:6.43:0,6,45	0/1:4,2:4:3.22:18,0,3
chr10	19389370	.	G	GTA	452.64	PASS	AB=0.953;AC=20;AF=0.385;AN=52;BaseQRankSum=0.679;DP=1278;FS=6.726;HRun=0;HaplotypeScore=301.1603;InbreedingCoeff=-0.1463;MQ=20.66;MQ0=183;MQRankSum=0.254;QD=0.51;ReadPosRankSum=0.846;VQSLOD=1.4289;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:40,1:27:1.72:5,2,0	0/0:19,3:16:0.10:0,0,4	./.	./.	0/1:27,12:29:0.11:0,0,0	0/0:31,0:21:0.94:0,1,2	0/1:58,2:33:8.39:21,0,8	0/1:81,0:26:17.83:18,0,543	0/0:42,0:26:3.26:0,3,18	0/1:84,3:41:99:138,0,322	0/1:37,2:29:0:1,0,0	0/1:58,3:39:28.88:29,0,46	0/1:56,3:35:42:87,0,42	1/1:58,2:31:4.69:43,5,0	0/1:59,1:44:0.06:0,0,0	0/1:67,2:45:4.72:10,0,5	0/1:18,1:14:37.26:76,0,37	0/0:38,0:22:31.56:0,32,313	0/1:32,0:13:22.31:22,0,67	0/1:37,0:30:6.01:6,0,40	0/0:96,0:48:5.76:0,6,21	0/0:54,0:33:1.25:0,1,4	0/0:42,2:26:3.83:0,4,22	1/1:58,0:35:0.82:2,1,0	0/0:24,7:24:0.60:0,1,1	0/1:56,2:33:99:108,0,376	0/1:21,2:17:7.49:7,0,86	0/0:17,0:14:5.18:0,5,70
chr10	19389374	.	A	ATG	192.64	PASS	AB=0.993;AC=18;AF=0.346;AN=52;BaseQRankSum=1.668;DP=1446;FS=2.855;HRun=0;HaplotypeScore=332.7537;InbreedingCoeff=0.0904;MQ=20.69;MQ0=202;MQRankSum=0.423;QD=0.26;ReadPosRankSum=-0.593;VQSLOD=2.0023;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:48,1:30:1.72:4,2,0	0/1:21,0:16:6.97:11,0,7	./.	./.	0/1:47,0:34:0:0,0,0	0/1:34,0:22:1.50:2,0,16	0/0:68,2:38:0.63:0,1,41	0/0:86,0:26:30.76:0,31,507	0/0:54,0:33:3.34:0,3,36	0/1:104,0:50:99:100,0,317	0/1:42,1:32:0:1,0,0	0/1:66,0:42:35.91:36,0,51	1/1:65,0:41:8.50:64,8,0	0/1:70,0:38:24.05:24,0,32	0/0:64,2:46:0.29:0,0,1	1/1:81,0:51:2.74:41,3,0	0/1:25,0:19:27.24:27,0,32	0/1:41,0:25:2.27:2,0,320	0/0:33,0:12:5.46:0,5,59	0/0:34,1:32:4.98:0,5,39	0/0:101,0:54:10.38:0,10,70	0/0:58,0:36:2.03:0,2,5	0/0:49,0:32:3.88:0,4,36	1/1:58,1:37:0.82:2,1,0	0/1:39,0:32:0.06:1,0,0	0/0:63,0:37:64.82:0,65,668	0/0:32,0:25:8.83:0,9,73	0/0:20,0:17:0.68:0,1,44
chr10	19389380	.	G	GTA	481.44	PASS	AB=0.963;AC=17;AF=0.327;AN=52;BaseQRankSum=-0.031;DP=1595;FS=2.717;HRun=0;HaplotypeScore=359.8751;InbreedingCoeff=-0.0917;MQ=20.73;MQ0=221;MQRankSum=1.032;QD=0.49;ReadPosRankSum=0.336;VQSLOD=1.6128;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:53,0:33:2.18:5,2,0	0/0:25,0:18:5.14:0,5,38	./.	./.	0/1:52,0:38:0.13:0,0,0	0/0:38,0:26:6.17:0,6,41	0/0:74,6:42:13.64:0,14,56	0/0:99,0:27:44.87:0,45,660	0/0:60,0:38:3.34:0,3,46	0/1:113,5:59:99:195,0,529	0/1:40,8:35:0:1,0,0	0/1:65,4:44:75.55:78,0,76	0/1:63,6:42:31.41:88,0,31	0/1:72,5:44:35.13:57,0,35	0/1:71,0:49:0.14:0,0,0	0/1:87,2:56:20.84:47,0,21	0/1:28,2:23:65.08:65,0,67	0/0:43,0:27:21.53:0,22,458	0/0:32,0:11:8.70:0,9,94	0/1:44,0:36:1.84:2,0,83	0/1:118,0:56:2.20:2,0,92	0/0:58,7:39:1.94:0,2,5	0/0:51,5:36:3.88:0,4,48	1/1:66,1:43:0.82:2,1,0	0/1:45,0:37:11.36:16,0,11	0/0:71,1:43:36.30:0,36,760	0/0:36,0:27:17.14:0,17,162	0/1:23,0:20:47.95:48,0,94
chr10	19389382	.	G	GTGTT	61.25	PASS	AB=0.999;AC=17;AF=0.327;AN=52;BaseQRankSum=7.656;DP=1626;FS=0.651;HRun=0;HaplotypeScore=371.8907;InbreedingCoeff=0.0842;MQ=20.71;MQ0=228;MQRankSum=-1.559;QD=0.07;ReadPosRankSum=-7.853;VQSLOD=0.1630;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:33:0.67:0,1,2	0/1:25,0:18:23.05:36,0,23	./.	./.	1/1:51,0:38:0.46:2,0,0	0/0:38,0:26:6.46:0,6,42	0/1:80,0:43:42.46:42,0,68	0/0:106,0:30:59.55:0,60,936	0/1:60,0:38:5.46:5,0,45	0/1:121,0:61:10.69:11,0,643	1/1:49,0:36:2.03:6,2,0	0/0:70,0:44:6.97:0,7,127	0/1:69,0:41:42.50:42,0,57	0/1:80,0:47:0.50:1,0,66	1/1:64,9:50:10.57:28,11,0	0/1:91,0:57:1.62:2,0,17	0/0:30,0:23:6.58:0,7,120	0/0:43,0:27:21.59:0,22,525	0/0:33,0:12:5.97:0,6,81	0/0:43,0:36:0.80:0,1,103	0/0:118,0:56:6.07:0,6,93	1/1:66,0:39:2.26:7,2,0	0/1:57,0:36:1.09:1,0,48	0/1:70,0:43:1.93:5,0,2	0/0:47,0:39:2.72:0,3,26	0/0:74,0:44:92.28:0,92,1091	0/0:34,1:27:8.86:0,9,103	0/0:25,0:22:18.74:0,19,182
chr10	19389384	.	ATG	A	619.82	PASS	AB=0.923;AC=19;AF=0.365;AN=52;BaseQRankSum=1.626;DP=1660;FS=2.288;HRun=0;HaplotypeScore=356.5797;InbreedingCoeff=-0.1051;MQ=20.63;MQ0=238;MQRankSum=-0.112;QD=0.60;ReadPosRankSum=0.438;VQSLOD=1.6796;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:33:1.89:0,2,35	0/1:21,5:18:5.15:19,0,5	./.	./.	0/1:47,4:37:0.02:0,0,1	0/1:35,4:26:0.90:1,0,39	1/1:81,5:43:3.22:34,3,0	0/0:106,0:26:51.14:0,51,784	0/0:60,1:38:3.41:0,3,53	0/1:119,6:62:99:205,0,478	0/1:47,4:38:0.12:0,0,0	0/1:57,14:45:63.31:63,0,75	0/1:63,6:42:22.49:22,0,62	0/1:80,2:49:0.04:0,0,37	0/1:67,7:51:0.11:0,0,0	0/0:85,7:58:4.58:0,5,83	0/0:30,0:23:13.46:0,13,165	0/1:41,3:27:2.48:2,0,488	0/0:32,0:12:6.46:0,6,65	0/1:47,0:40:3.05:3,0,46	0/0:120,0:58:11.35:0,11,129	0/0:57,11:40:3.43:0,3,11	0/0:52,5:36:4.86:0,5,57	1/1:67,4:45:2.49:39,2,0	0/1:42,6:40:22.89:23,0,39	0/1:70,7:45:99:238,0,277	0/1:35,1:27:4.24:11,0,4	0/1:21,2:23:21.65:84,0,22
chr10	19389386	.	G	GTA	369.09	PASS	AB=0.987;AC=14;AF=0.269;AN=52;BaseQRankSum=-1.634;DP=1698;FS=30.554;HRun=0;HaplotypeScore=370.7847;InbreedingCoeff=-0.0498;MQ=20.84;MQ0=243;MQRankSum=1.802;QD=0.53;ReadPosRankSum=-2.499;VQSLOD=0.8119;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:59,0:34:0.60:1,0,31	0/1:26,0:18:6.15:6,0,7	./.	./.	0/1:52,1:39:0.13:0,0,0	0/0:38,1:26:6.74:0,7,49	0/0:87,0:43:8.23:0,8,64	0/0:109,0:26:60.03:0,60,810	0/0:62,1:39:3.24:0,3,46	0/1:124,2:63:99:121,0,691	1/1:50,1:38:0.47:2,0,0	0/1:73,0:47:35.48:35,0,97	0/0:72,0:43:20.59:0,21,152	0/0:80,2:49:10.72:0,11,78	0/0:78,2:56:2.60:0,3,12	0/0:95,1:61:9.49:0,9,71	0/0:32,0:24:21.95:0,22,218	0/0:44,1:28:36.84:0,37,502	0/0:33,0:14:6.88:0,7,69	0/1:48,1:41:37.82:38,0,90	0/0:125,0:60:11.20:0,11,128	0/0:68,0:40:3.29:0,3,9	0/0:57,0:36:3.88:0,4,48	1/1:72,0:45:3.83:41,4,0	0/1:48,2:42:37.66:55,0,38	0/1:80,1:49:42.09:42,0,565	0/1:37,0:28:2.17:2,0,44	0/1:25,0:23:71.15:152,0,71
chr10	19389392	.	GTA	G	823.25	PASS	AB=0.995;AC=20;AF=0.385;AN=52;BaseQRankSum=4.011;DP=1772;FS=19.961;HRun=0;HaplotypeScore=368.2833;InbreedingCoeff=-0.1172;MQ=21.01;MQ0=252;MQRankSum=-3.269;QD=0.79;ReadPosRankSum=3.047;VQSLOD=0.9489;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:62,0:36:2.73:0,3,52	0/1:28,0:20:11.99:50,0,12	./.	./.	0/1:55,0:41:0.12:0,0,1	0/1:39,0:27:2.32:2,0,42	1/1:86,1:43:18.09:109,18,0	0/0:108,0:23:68.66:0,69,903	0/0:67,0:39:3.41:0,3,56	0/1:132,0:65:99:185,0,665	0/1:52,0:38:0.12:0,0,0	0/1:75,0:49:47.29:47,0,57	0/1:77,0:46:68.05:68,0,119	0/1:86,0:53:28.19:28,0,39	0/0:83,0:57:1.25:0,1,2	0/0:100,0:64:7.27:0,7,88	0/1:36,0:28:8.08:8,0,202	0/0:45,0:28:15.18:0,15,565	0/1:37,0:20:7.14:7,0,145	0/1:48,3:42:45.22:45,0,120	0/0:135,0:70:5.23:0,5,95	0/0:70,0:42:3.24:0,3,10	0/0:55,3:37:4.62:0,5,56	1/1:73,1:47:2.32:14,2,0	0/1:51,0:43:4.18:4,0,54	0/1:91,1:55:99:263,0,359	1/1:40,0:29:18.63:115,19,0	0/1:28,0:25:17.16:17,0,109
chr10	19389394	.	ATG	A	1213.60	PASS	AB=0.888;AC=14;AF=0.269;AN=52;BaseQRankSum=2.801;DP=1804;FS=18.880;HRun=0;HaplotypeScore=373.4338;InbreedingCoeff=-0.1211;MQ=21.15;MQ0=254;MQRankSum=-2.157;QD=1.32;ReadPosRankSum=3.410;VQSLOD=0.7374;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:61,1:35:1.99:0,2,51	0/1:20,7:20:14.94:33,0,15	./.	./.	0/1:40,15:42:0.02:0,0,1	0/1:37,4:29:16.93:17,0,22	1/1:86,5:45:7.33:171,7,0	0/0:105,0:23:61.74:0,62,839	0/0:64,3:39:3.41:0,3,42	0/1:125,10:65:99:260,0,784	0/1:46,8:39:0.12:0,0,0	0/1:68,7:49:31.44:52,0,31	0/1:74,5:49:93.01:93,0,182	0/1:77,10:54:47.63:79,0,48	0/0:79,5:62:0.78:0,1,2	0/1:91,9:64:11.13:11,0,67	0/1:38,1:29:47.29:47,0,163	0/0:45,0:28:32.53:0,33,504	0/0:40,0:23:39.31:0,39,406	0/0:51,0:42:22.48:0,22,257	0/0:137,0:72:0.98:0,1,66	0/0:66,5:43:5.43:0,5,28	0/0:52,7:37:4.62:0,5,43	0/0:74,1:48:1.97:0,2,11	0/0:41,10:46:9.37:0,9,55	0/1:79,12:57:99:426,0,407	0/1:31,9:30:3.18:158,0,3	0/0:27,0:25:12.95:0,13,244
chr10	19389402	.	GTA	G	561.15	PASS	AB=0.996;AC=17;AF=0.327;AN=52;BaseQRankSum=3.535;DP=1911;FS=10.571;HRun=0;HaplotypeScore=390.2661;InbreedingCoeff=-0.1389;MQ=21.18;MQ0=270;MQRankSum=-2.894;QD=0.47;ReadPosRankSum=1.623;VQSLOD=0.9584;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:67,0:40:2.09:0,2,57	0/1:28,0:20:13:13,0,29	./.	./.	0/1:58,1:42:0.12:0,0,1	0/1:42,0:29:4.54:5,0,8	1/1:94,1:48:17.91:111,18,0	0/0:105,0:23:48.81:0,49,757	0/0:70,0:41:3.41:0,3,53	0/1:147,0:72:80.26:80,0,1016	0/1:58,0:42:0.12:0,0,0	0/1:77,0:49:20.11:20,0,71	0/1:84,0:51:57.83:58,0,218	0/1:87,1:55:31.31:31,0,40	1/1:95,0:65:0.18:2,0,0	0/0:107,0:69:0.88:0,1,99	0/1:46,0:33:20.26:20,0,173	0/0:48,0:30:33.68:0,34,535	0/0:46,0:28:26.26:0,26,560	0/0:57,0:47:21.26:0,21,416	0/1:145,0:81:24.78:25,0,49	0/1:76,0:45:6.01:6,0,37	0/0:60,0:39:4.62:0,5,59	0/0:73,0:48:6.76:0,7,60	0/0:55,1:47:10.26:0,10,89	0/1:102,0:60:99:212,0,636	0/1:45,1:31:38.85:116,0,39	0/0:29,1:26:12.19:0,12,300
chr10	19389414	.	GTA	G	827.80	PASS	AB=0.971;AC=18;AF=0.346;AN=52;BaseQRankSum=4.006;DP=1954;FS=14.994;HRun=0;HaplotypeScore=394.8306;InbreedingCoeff=-0.2153;MQ=21.34;MQ0=284;MQRankSum=-1.191;QD=0.64;ReadPosRankSum=-2.669;VQSLOD=-0.0970;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:69,0:40:3.53:0,4,60	0/1:34,0:22:13.89:14,0,26	./.	./.	0/1:59,0:42:0.12:0,0,1	1/1:47,0:31:2.48:11,2,0	0/1:95,2:49:2.26:119,0,2	0/0:94,0:14:33.03:0,33,494	0/0:71,0:42:3.41:0,3,51	0/1:154,5:79:99:134,0,1135	1/1:53,8:44:2.67:24,3,0	0/1:75,5:50:59.54:60,0,107	0/1:80,6:51:99:100,0,224	0/1:87,5:58:3.93:60,0,4	0/0:98,0:67:2.39:0,2,19	0/1:106,3:70:30.24:30,0,107	0/1:48,3:39:99:115,0,118	0/0:46,0:28:38.65:0,39,576	0/0:43,0:27:18.62:0,19,438	0/0:55,1:44:33.65:0,34,407	0/1:144,0:85:27.80:28,0,85	0/1:78,7:51:6.47:6,0,54	0/0:56,5:41:4.50:0,5,62	0/0:72,0:47:5.82:0,6,117	0/0:57,0:48:10.04:0,10,124	0/1:99,2:60:99:117,0,862	0/1:52,0:35:67.89:123,0,68	0/1:30,0:26:28.73:29,0,351
chr10	19389416	.	A	ATG	492.54	PASS	AB=0.990;AC=13;AF=0.250;AN=52;BaseQRankSum=3.110;DP=1962;FS=35.345;HRun=0;HaplotypeScore=397.5590;InbreedingCoeff=-0.1766;MQ=21.47;MQ0=286;MQRankSum=-1.501;QD=0.57;ReadPosRankSum=-1.648;VQSLOD=0.9624;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:69,0:40:2.90:0,3,40	0/0:33,0:22:7.67:0,8,59	./.	./.	0/1:59,1:43:0:0,0,0	1/1:48,0:32:4.69:43,5,0	0/0:95,0:47:0.84:0,1,33	0/0:93,0:12:13.74:0,14,210	0/0:71,0:42:3.18:0,3,36	0/1:159,0:79:99:123,0,597	0/1:61,0:44:0.01:1,0,0	0/0:80,0:50:1.68:0,2,96	0/1:87,0:52:49.18:49,0,188	0/1:92,0:58:13.57:34,0,14	0/0:98,0:67:4.74:0,5,20	0/0:112,0:73:9.11:0,9,86	0/1:51,0:39:36.15:36,0,95	0/0:46,0:28:16.55:0,17,345	0/0:45,0:27:6.80:0,7,216	0/1:56,0:44:99:100,0,220	0/0:141,1:83:8.05:0,8,64	0/0:84,0:51:3.46:0,3,38	0/0:61,0:41:3.88:0,4,42	0/0:72,0:47:4.76:0,5,76	0/1:57,2:49:11.59:12,0,65	0/1:102,0:60:99:123,0,631	0/1:52,0:35:13.27:13,0,78	0/1:29,2:27:87.84:88,0,213
chr10	19389422	.	GTGTA	G	1149.37	PASS	AB=0.964;AC=22;AF=0.423;AN=52;BaseQRankSum=1.278;DP=1994;FS=22.780;HRun=0;HaplotypeScore=409.3036;InbreedingCoeff=-0.2824;MQ=21.73;MQ0=291;MQRankSum=-0.118;QD=0.81;ReadPosRankSum=-5.061;VQSLOD=0.3917;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:68,1:40:3.53:0,4,79	0/1:30,4:23:12.56:23,0,13	./.	./.	1/1:53,9:45:2:22,2,0	1/1:48,2:34:5.82:143,6,0	0/1:91,0:43:40.38:40,0,45	0/1:104,0:11:19.10:19,0,120	0/0:70,1:42:5.69:0,6,33	0/1:154,4:82:99:124,0,1348	1/1:61,0:44:2.22:31,2,0	0/1:79,1:51:39.22:39,0,125	0/1:90,0:54:46.67:47,0,258	0/1:94,0:60:11.50:24,0,11	1/1:98,1:68:5.68:74,6,0	0/1:113,0:74:1.44:1,0,133	0/0:35,16:39:9.88:0,10,246	0/0:47,0:29:36.39:0,36,649	0/1:41,0:24:31.76:32,0,243	0/0:54,0:43:1.26:0,1,465	0/0:146,0:87:7.31:0,7,133	0/1:85,2:53:19.32:19,0,50	0/0:64,0:42:3.10:0,3,65	0/0:71,1:47:6.80:0,7,158	0/1:53,8:51:53.17:53,0,145	0/1:101,5:60:99:171,0,1140	0/1:46,9:38:58.91:291,0,59	0/1:31,1:27:99:143,0,415
chr10	19389424	.	GTA	G	935.93	PASS	AB=0.983;AC=23;AF=0.442;AN=52;BaseQRankSum=1.673;DP=1994;FS=19.356;HRun=0;HaplotypeScore=403.2575;InbreedingCoeff=-0.4342;MQ=21.93;MQ0=286;MQRankSum=0.343;QD=0.61;ReadPosRankSum=-4.370;VQSLOD=0.4663;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:69,0:40:3.16:0,3,57	0/1:33,1:23:15.17:15,0,15	./.	./.	1/1:56,6:45:2.38:23,2,0	1/1:50,0:34:3.90:66,4,0	0/1:88,0:40:36.41:52,0,36	0/0:104,0:11:15.58:0,16,131	0/0:69,1:42:2.77:0,3,20	0/1:162,0:85:99:124,0,905	1/1:61,0:44:2.67:24,3,0	0/1:79,0:50:50.27:50,0,67	0/1:90,0:54:51.91:52,0,158	0/1:97,0:63:9.84:22,0,10	0/0:94,4:67:0.26:0,0,2	0/1:116,0:77:30.08:30,0,97	0/1:50,1:39:5.78:6,0,118	0/0:47,0:29:28.79:0,29,480	0/1:38,0:22:51.89:52,0,186	0/1:53,0:41:47.89:48,0,314	0/1:145,0:88:1.74:2,0,111	0/1:89,0:55:18.44:18,0,53	0/1:64,1:44:16.84:17,0,49	0/0:73,0:48:6.80:0,7,110	0/1:60,1:51:22.01:22,0,98	0/1:97,5:59:99:206,0,829	0/1:51,4:38:37.15:141,0,37	0/1:29,3:27:99:110,0,311
chr10	19389426	.	ATGTG	A	554.73	PASS	AB=0.994;AC=18;AF=0.346;AN=52;BaseQRankSum=1.776;DP=1992;FS=7.563;HRun=0;HaplotypeScore=415.3056;InbreedingCoeff=-0.1221;MQ=22.24;MQ0=287;MQRankSum=-1.241;QD=0.47;ReadPosRankSum=-3.191;VQSLOD=0.4706;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:69,0:40:2.44:0,2,62	1/1:33,0:23:2.85:11,3,0	./.	./.	0/0:63,0:46:0.46:0,0,2	0/1:50,0:34:9.06:79,0,9	0/0:84,0:40:3.37:0,3,62	0/1:99,0:8:7.36:7,0,20	0/0:70,0:43:2.36:0,2,15	0/1:159,0:85:11.95:12,0,1250	1/1:61,1:45:1.58:7,2,0	0/0:78,2:52:2.80:0,3,114	0/1:89,2:55:19.35:19,0,248	0/0:99,0:65:10.92:0,11,58	1/1:95,3:67:6.07:101,6,0	0/0:114,0:76:12.19:0,12,140	0/0:50,0:39:17.78:0,18,257	0/0:46,0:29:29.43:0,29,470	0/1:37,0:20:2.11:2,0,203	0/0:50,0:40:36.82:0,37,484	0/1:144,0:90:1.49:1,0,112	0/1:89,0:56:3.28:3,0,43	0/1:67,0:46:5.20:5,0,40	0/0:73,1:49:9.69:0,10,130	0/1:62,0:52:17.22:17,0,107	0/1:103,0:58:99:145,0,759	0/1:54,0:37:28.69:197,0,29	0/1:32,0:27:82.63:83,0,309
chr10	19389432	.	G	GTGTGTA	2324.74	PASS	AB=0.975;AC=24;AF=0.462;AN=52;BaseQRankSum=-1.591;DP=2003;FS=5.185;HRun=0;HaplotypeScore=432.6366;InbreedingCoeff=-0.1982;MQ=23.39;MQ0=278;MQRankSum=1.263;QD=1.57;ReadPosRankSum=-4.128;VQSLOD=0.4035;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:69,0:40:1.07:0,1,58	1/1:34,0:24:11.10:71,11,0	./.	./.	1/1:61,0:46:2.94:47,3,0	0/1:48,1:33:3.86:253,0,4	0/0:80,0:39:4.68:0,5,74	0/1:91,0:5:7.42:7,0,20	1/1:71,0:44:5.52:46,6,0	0/1:153,3:82:99:382,0,1146	1/1:61,2:47:6.16:46,6,0	0/1:81,1:53:86.10:127,0,86	0/1:75,16:63:99:102,0,234	0/0:83,16:70:9.18:0,9,59	1/1:82,17:72:4.55:186,5,0	0/0:101,12:76:12.11:0,12,167	0/0:49,0:39:15.28:0,15,229	0/0:45,0:29:25.41:0,25,483	0/1:34,0:18:19.80:20,0,265	0/0:52,0:42:29.27:0,29,534	0/1:150,0:92:22:22,0,98	0/1:87,4:58:47.85:83,0,48	0/1:70,0:49:39.69:40,0,41	0/1:74,0:50:15.53:16,0,124	0/1:63,0:53:99:135,0,117	0/1:100,0:57:99:314,0,816	0/1:54,0:38:37.47:411,0,37	0/1:34,0:28:99:176,0,345
chr10	19389436	.	G	GTA	146.79	PASS	AB=0.993;AC=10;AF=0.192;AN=52;BaseQRankSum=4.179;DP=1982;FS=8.809;HRun=0;HaplotypeScore=427.9778;InbreedingCoeff=-0.1733;MQ=23.97;MQ0=269;MQRankSum=-4.161;QD=0.19;ReadPosRankSum=0.437;VQSLOD=0.7712;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:66,0:37:0.99:0,1,18	0/0:35,0:25:1.78:0,2,65	./.	./.	0/0:61,1:48:5.60:0,6,47	0/1:49,0:33:4.08:4,0,33	0/0:74,0:37:8.64:0,9,51	0/0:86,0:4:8.59:0,9,46	1/1:73,0:44:1.09:2,1,0	0/1:154,2:82:99:105,0,695	0/0:59,2:46:5.32:0,5,47	0/0:83,0:54:17.92:0,18,137	0/1:96,0:62:14.40:14,0,190	0/1:102,0:69:12.22:12,0,47	0/1:98,1:70:16.96:23,0,17	0/0:114,1:78:15.99:0,16,116	0/0:52,0:40:8.15:0,8,142	0/0:47,0:30:32.75:0,33,349	0/0:32,0:17:3.79:0,4,133	0/0:55,0:42:35.73:0,36,235	0/0:146,0:93:9.55:0,10,75	0/0:90,1:58:13.65:0,14,122	0/0:70,0:47:3.26:0,3,40	0/0:75,0:52:9.42:0,9,74	0/0:63,1:55:19.56:0,20,151	0/1:103,0:60:77.09:77,0,331	0/1:52,0:39:24.72:25,0,127	0/1:33,0:28:6.48:6,0,180
chr10	19389452	.	A	ATG	210.13	PASS	AB=0.942;AC=7;AF=0.140;AN=50;BaseQRankSum=6.006;DP=1720;FS=10.967;HRun=0;HaplotypeScore=360.9810;InbreedingCoeff=-0.0382;MQ=26.94;MQ0=216;MQRankSum=-4.770;QD=0.53;ReadPosRankSum=-2.992;VQSLOD=0.6965;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:56,2:36:1.36:3,1,0	0/0:27,0:18:20.95:0,21,254	./.	./.	0/0:52,0:41:8.65:0,9,119	0/1:45,0:32:13.07:13,0,219	0/0:53,0:29:17.78:0,18,208	./.	0/1:63,4:42:30.32:71,0,30	0/0:131,0:72:60.18:0,60,1148	0/0:40,0:33:8.64:0,9,120	0/0:68,0:46:29.83:0,30,390	0/0:82,0:54:19.75:0,20,216	0/0:86,0:63:11.77:0,12,158	0/0:90,0:63:6.05:0,6,188	0/0:102,0:71:22.73:0,23,237	0/0:47,0:35:26.40:0,26,316	0/0:40,0:27:27.05:0,27,333	0/0:29,0:14:12.04:0,12,159	0/0:43,5:36:16.06:0,16,252	0/1:99,27:95:64.84:142,0,65	0/0:72,0:49:17.99:0,18,227	0/0:62,0:43:3.31:0,3,42	0/0:71,0:52:28.28:0,28,319	0/0:60,0:53:31.42:0,31,399	0/0:83,1:52:1.20:0,1,766	0/1:54,0:39:46.37:46,0,397	0/1:33,0:28:48.58:49,0,295
chr10	19389480	.	ATG	A	2826.67	PASS	AB=0.978;AC=18;AF=0.321;AN=56;BaseQRankSum=6.036;DP=1200;FS=24.263;HRun=0;HaplotypeScore=201.9972;InbreedingCoeff=0.8110;MQ=34.21;MQ0=107;MQRankSum=-0.106;QD=7.81;ReadPosRankSum=2.801;VQSLOD=1.9443;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:31,7:25:8.06:47,8,0	1/1:5,13:14:27.03:350,27,0	0/0:28,0:4:8.80:0,9,87	0/0:37,0:6:18.06:0,18,278	1/1:6,25:27:38.68:506,39,0	0/0:29,0:23:37.91:0,38,650	0/0:46,0:37:46.84:0,47,799	0/0:45,1:17:3.19:0,3,551	1/1:27,9:24:7.74:82,8,0	0/0:74,3:50:30.39:0,30,1314	0/0:29,0:24:17.63:0,18,305	0/0:46,0:37:42.14:0,42,708	0/0:59,0:43:20.37:0,20,516	0/0:49,0:43:30.10:0,30,501	0/0:57,0:48:36.12:0,36,592	0/1:63,3:54:21:21,0,230	0/0:36,0:29:36.11:0,36,585	0/0:34,0:25:38.43:0,38,567	0/0:32,0:17:23.58:0,24,337	0/1:32,0:26:0.44:0,0,1	0/0:81,1:61:41.80:0,42,661	0/0:44,0:37:25.98:0,26,458	0/0:33,0:29:7.54:0,8,151	0/0:70,0:54:24.45:0,24,941	1/1:13,25:32:41.65:546,42,0	1/1:31,23:40:13.87:737,14,0	1/1:9,21:22:36.03:463,36,0	1/1:9,10:16:21.07:272,21,0
chr10	19389511	.	A	AGT	830.41	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=4.174;DP=1082;FS=9.153;HRun=0;HaplotypeScore=219.3573;InbreedingCoeff=0.9621;MQ=45.83;MQ0=17;MQRankSum=-3.668;QD=13.84;ReadPosRankSum=-3.191;VQSLOD=1.5133;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:21,13:26:19.89:361,20,0	0/0:18,0:18:39.12:0,39,497	0/0:68,1:18:43.62:0,44,475	0/0:62,0:20:33.68:0,34,452	0/0:25,0:25:47.75:0,48,608	0/0:27,0:25:42.08:0,42,500	0/0:43,0:40:78.25:0,78,985	0/0:40,0:37:87.22:0,87,1060	1/1:13,12:24:36.12:590,36,0	0/0:51,0:44:71.73:0,72,898	0/0:24,0:23:50.95:0,51,561	0/0:48,0:39:69.20:0,69,859	0/0:49,0:43:54.17:0,54,685	0/0:48,0:46:72.21:0,72,896	0/0:52,0:49:99:0,99,1214	0/0:49,1:44:8.32:0,8,607	0/0:31,0:29:78.21:0,78,972	0/0:35,0:29:40.48:0,40,530	0/0:20,0:18:23.86:0,24,287	0/0:26,0:24:47.55:0,48,400	0/0:69,0:63:93.26:0,93,1172	0/0:37,0:38:77.58:0,78,756	0/0:33,0:31:52.93:0,53,545	0/0:69,0:60:99:0,102,1296	0/0:27,0:23:48.11:0,48,594	0/0:36,0:34:78.25:0,78,993	0/0:20,0:18:30.05:0,30,362	0/0:11,0:12:35.95:0,36,434
chr10	19389580	.	ACACT	A	2082.15	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.560;DP=783;FS=14.923;HRun=0;HaplotypeScore=129.7480;InbreedingCoeff=0.9962;MQ=64.21;MQ0=0;MQRankSum=-1.627;QD=37.18;ReadPosRankSum=3.073;VQSLOD=3.2865;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,29:33:78.27:1433,78,0	0/0:17,0:17:51.14:0,51,1228	0/0:12,0:12:24.08:0,24,556	0/0:14,0:14:39.13:0,39,941	0/0:23,0:22:60.21:0,60,1582	0/0:18,0:16:21.07:0,21,554	0/0:24,0:23:57.20:0,57,1497	0/0:31,0:31:84.29:0,84,2171	1/1:4,19:22:42.14:770,42,0	0/0:27,0:26:72.25:0,72,1845	0/0:22,0:21:51.13:0,51,1313	0/0:34,0:27:47.96:0,48,1242	0/0:36,0:30:50.93:0,51,1230	0/0:41,0:36:63.22:0,63,1620	0/0:48,0:44:99:0,102,2688	0/0:33,0:29:47.95:0,48,1262	0/0:34,0:34:90.31:0,90,2340	0/0:22,0:22:60.18:0,60,1524	0/0:24,0:24:66.23:0,66,1721	0/0:35,0:35:54.14:0,54,1361	0/0:56,0:56:99:0,163,4147	0/0:35,0:32:60.21:0,60,1559	0/0:22,0:22:48.16:0,48,1264	0/0:39,0:38:90.31:0,90,2371	0/0:20,0:20:60.21:0,60,1501	0/0:32,0:30:78.23:0,78,1966	0/0:19,0:16:36.07:0,36,880	0/0:9,0:9:27.09:0,27,711
chr10	19389800	.	A	AGTAATGT	36482.54	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-8.072;DP=623;FS=0.000;HRun=0;HaplotypeScore=127.9502;InbreedingCoeff=0.9892;MQ=80.79;MQ0=0;MQRankSum=-17.023;QD=85.64;ReadPosRankSum=-0.033;VQSLOD=5.4313;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:13,20:38:71.99:2350,72,0	0/0:9,0:8:24.07:0,24,591	0/0:21,0:21:60.05:0,60,1292	0/0:27,0:27:78.20:0,78,1890	0/0:26,0:26:69.24:0,69,1783	1/1:3,15:19:51.04:1702,51,0	1/1:10,16:27:77.72:2543,78,0	1/1:13,18:34:99:3618,102,0	1/1:4,10:15:33.11:1209,33,0	1/1:3,12:17:48.16:1768,48,0	1/1:3,8:13:30.10:785,30,0	1/1:9,14:24:60.14:2076,60,0	1/1:4,17:23:66.23:2590,66,0	1/1:8,25:38:93.32:3632,93,0	0/0:37,0:37:99:0,105,2752	1/1:3,20:25:66.23:2503,66,0	1/1:4,5:11:20.99:698,21,0	1/1:4,15:22:48.16:1896,48,0	1/1:8,14:23:69.24:2547,69,0	1/1:11,10:20:45.15:1292,45,0	1/1:3,3:6:12.04:489,12,0	1/1:8,22:33:83.97:2389,84,0	1/1:6,11:16:38.98:1140,39,0	1/1:3,15:20:32.19:1255,32,0	0/0:17,0:17:36.11:0,36,905	0/0:32,0:32:96.33:0,96,2563	0/0:24,0:24:72.13:0,72,1760	0/0:4,0:4:12:0,12,262
chr10	19389866	.	ATGATTGTTTAGGGGC	A	2588	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=6.383;DP=605;FS=2.604;HRun=0;HaplotypeScore=252.0207;InbreedingCoeff=0.7278;MQ=88.98;MQ0=1;MQRankSum=-5.082;QD=30.81;ReadPosRankSum=-0.033;VQSLOD=2.4476;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:75.25:0,75,4101	0/0:14,0:14:36.12:0,36,2569	0/0:32,0:30:51.16:0,51,2174	0/1:26,0:26:10.89:11,0,1175	0/0:23,0:23:51.16:0,51,2940	0/0:15,0:15:36.12:0,36,2508	0/0:25,0:25:57.15:0,57,3805	1/1:14,1:15:9.01:109,9,0	0/0:26,0:25:63.22:0,63,4523	0/0:15,0:15:33.11:0,33,2008	0/0:16,0:16:42.14:0,42,2631	0/0:26,0:26:48.63:0,49,2905	0/0:17,0:17:30.10:0,30,2147	0/0:30,0:30:63.22:0,63,4490	0/0:30,0:30:72.25:0,72,4887	0/0:18,0:18:39.13:0,39,2591	0/0:17,0:17:42.14:0,42,3038	0/0:21,0:21:48.16:0,48,3475	1/1:16,1:16:3.01:127,3,0	1/1:5,21:26:63.22:2473,63,0	0/0:4,1:5:1.25:0,1,3	0/0:25,0:25:54.18:0,54,3070	0/0:14,0:14:30.10:0,30,2090	0/0:23,0:23:48.63:0,49,3130	0/0:28,0:28:63.22:0,63,4205	0/0:23,0:23:51.18:0,51,3105	0/0:31,0:30:81.24:0,81,4795	0/0:8,0:8:18.06:0,18,1292
chr10	19390010	.	T	TACAC	1007.74	PASS	AB=0.889;AC=8;AF=0.160;AN=50;BaseQRankSum=-4.346;DP=659;FS=8.202;HRun=0;HaplotypeScore=185.8952;InbreedingCoeff=0.2882;MQ=63.64;MQ0=19;MQRankSum=-0.213;QD=7.87;ReadPosRankSum=0.191;VQSLOD=2.1675;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:17:2.03:0,2,6	0/0:4,0:4:5.84:0,6,41	./.	./.	0/0:25,0:25:5.36:0,5,22	0/0:25,0:26:0.44:0,0,319	0/1:29,0:30:12.35:12,0,338	./.	0/0:20,0:21:3.01:0,3,34	0/0:19,0:18:9.50:0,9,218	0/1:12,0:12:27.88:28,0,150	0/0:26,0:25:18.04:0,18,212	0/1:21,0:20:0.53:1,0,263	0/0:41,0:41:63.14:0,63,749	0/0:39,0:40:18.03:0,18,219	0/1:8,12:27:16.79:208,0,17	1/1:14,4:19:23.97:447,24,0	1/1:14,4:19:21.07:445,21,0	0/0:16,0:15:15.01:0,15,185	0/0:21,0:22:24.86:0,25,330	0/0:32,0:31:12.43:0,12,155	0/0:25,0:25:13.01:0,13,342	0/0:23,0:22:21.42:0,21,248	0/0:35,0:34:48.49:0,48,557	0/0:25,0:26:16.05:0,16,123	0/0:26,0:27:21.04:0,21,168	0/0:33,0:31:27.54:0,28,258	0/0:4,0:4:3:0,3,28
chr10	19390044	.	CACACAG	C	5019.11	PASS	AB=0.947;AC=30;AF=0.556;AN=54;BaseQRankSum=-8.357;DP=709;FS=4.285;HRun=0;HaplotypeScore=209.5068;InbreedingCoeff=-0.3611;MQ=52.03;MQ0=18;MQRankSum=-1.744;QD=7.92;ReadPosRankSum=-7.450;VQSLOD=1.4963;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	1/1:0,6:6:6.02:146,6,0	0/0:16,0:8:23.95:0,24,223	0/0:19,0:11:21.78:0,22,221	0/1:1,20:22:4.28:194,0,4	0/1:30,0:30:99:205,0,613	0/1:32,0:32:99:166,0,621	1/1:25,0:21:14.62:206,15,0	0/0:28,0:25:13.44:0,13,94	0/1:32,0:30:99:260,0,582	0/1:19,0:18:37.20:37,0,454	0/1:40,0:38:99:247,0,480	0/1:25,0:24:60.09:60,0,379	0/1:40,0:40:50.53:51,0,1391	0/1:2,0:35:20.29:75,0,20	0/1:32,0:32:99:174,0,367	0/1:14,0:14:7.11:7,0,336	0/1:15,0:15:99:115,0,345	0/1:17,0:17:57.15:57,0,117	0/1:28,0:28:11.42:11,0,203	0/1:29,0:27:10.34:10,0,105	0/1:31,0:31:61.07:61,0,779	0/1:24,0:23:62.55:63,0,521	0/1:49,0:48:99:341,0,988	1/1:18,5:26:60.04:849,60,0	1/1:26,4:31:5.38:821,5,0	1/1:4,23:26:39.01:792,39,0	1/1:0,5:5:3.01:73,3,0
chr10	19390048	.	CAG	C	5199.92	PASS	AB=0.971;AC=34;AF=0.607;AN=56;BaseQRankSum=-4.004;DP=714;FS=13.995;HRun=0;HaplotypeScore=178.3827;InbreedingCoeff=-0.1803;MQ=52.28;MQ0=15;MQRankSum=3.770;QD=8.07;ReadPosRankSum=-2.134;VQSLOD=3.1200;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:15,0:15:0:0,0,0	1/1:6,0:6:5.99:51,6,0	0/0:16,0:12:35.86:0,36,315	0/0:21,0:13:23.77:0,24,238	1/1:22,0:22:14.11:97,14,0	0/1:27,2:29:99:265,0,114	0/1:34,1:35:64.04:454,0,64	1/1:31,0:28:22.27:251,22,0	0/0:33,0:30:12.32:0,12,120	0/1:31,0:29:73.80:323,0,74	0/1:21,1:21:79.66:130,0,80	0/1:37,2:37:19.85:383,0,20	0/1:19,2:21:99:180,0,106	0/1:33,2:35:99:316,0,233	0/1:34,0:34:20.34:20,0,69	1/1:30,0:30:9.97:263,10,0	0/1:14,0:14:14.76:28,0,15	0/1:14,0:15:35.66:130,0,36	0/1:21,0:20:32.83:132,0,33	0/1:27,0:27:5.87:123,0,6	1/1:27,0:25:11.90:83,12,0	0/1:32,1:33:99:137,0,161	0/1:24,0:23:99:103,0,121	0/1:47,2:48:94.91:515,0,95	1/1:25,0:25:33.44:355,33,0	1/1:27,0:27:48.12:528,48,0	1/1:27,0:26:38.83:309,39,0	1/1:5,0:5:3:25,3,0
chr10	19390054	.	GAC	G	1960.57	PASS	AB=0.993;AC=24;AF=0.429;AN=56;BaseQRankSum=5.861;DP=713;FS=6.337;HRun=0;HaplotypeScore=192.7730;InbreedingCoeff=0.1598;MQ=55.95;MQ0=12;MQRankSum=-0.986;QD=4.17;ReadPosRankSum=2.225;VQSLOD=2.5292;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:11,0:11:0:0,0,0	0/1:6,0:6:4.43:4,0,29	0/0:19,0:17:41.95:0,42,621	0/0:28,0:22:21.30:0,21,559	1/1:20,0:20:7.28:28,7,0	0/1:28,0:28:13.81:14,0,300	0/1:37,0:37:45.51:46,0,289	1/1:5,26:29:46.34:768,46,0	0/1:33,0:30:1.11:1,0,246	0/0:30,0:28:6.25:0,6,259	0/0:20,0:19:0.11:0,0,134	0/1:36,0:34:10:10,0,176	0/1:20,0:20:44.87:45,0,220	0/1:35,0:35:5.74:6,0,630	0/0:36,0:36:23.53:0,24,153	0/0:30,0:30:5.77:0,6,189	0/0:12,1:13:23.12:0,23,189	0/0:15,0:15:18.59:0,19,190	1/1:2,18:19:11.59:449,12,0	1/1:2,25:27:26.95:344,27,0	1/1:3,23:25:12.04:183,12,0	0/1:28,3:31:33.46:33,0,373	0/0:25,0:24:11.98:0,12,295	0/1:47,0:46:44.14:44,0,400	0/0:25,0:25:2.97:0,3,67	0/1:30,0:30:72.16:72,0,87	1/1:26,0:25:25.32:83,25,0	0/1:6,0:6:1.47:1,0,15
chr10	19390134	.	C	CAG	1540.74	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=3.700;DP=697;FS=16.301;HRun=0;HaplotypeScore=177.5889;InbreedingCoeff=0.9695;MQ=51.66;MQ0=17;MQRankSum=-1.207;QD=18.34;ReadPosRankSum=-0.935;VQSLOD=2.3897;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:12.41:0,12,92	0/0:7,0:7:18.06:0,18,273	0/0:37,0:17:48.61:0,49,568	0/0:46,0:23:62.98:0,63,866	0/0:30,0:30:75.24:0,75,1115	0/0:21,0:21:45.15:0,45,657	0/0:25,0:24:51.17:0,51,745	1/1:14,17:28:46.67:693,47,0	0/0:22,0:22:15.86:0,16,116	0/0:27,0:27:75.13:0,75,1056	0/0:20,0:20:27.09:0,27,407	0/0:25,0:25:63.18:0,63,903	0/0:31,0:31:75.23:0,75,1106	0/0:27,0:27:69.20:0,69,951	0/0:40,0:40:87.28:0,87,1291	0/0:36,0:36:75.20:0,75,1045	0/0:10,0:10:15.05:0,15,221	0/0:16,0:16:35.16:0,35,553	1/1:16,3:16:31.92:391,32,0	1/1:14,3:17:12.05:353,12,0	1/1:11,6:17:18.04:260,18,0	0/0:30,0:29:48.15:0,48,696	0/0:22,0:21:42.14:0,42,601	0/0:43,0:42:84.17:0,84,1226	0/0:18,0:18:50.76:0,51,738	0/0:19,0:19:57.17:0,57,807	0/0:35,0:35:71.97:0,72,976	0/0:10,0:10:21.07:0,21,307
chr10	19390148	.	GACATACACACACAC	G	871.04	PASS	AB=0.866;AC=5;AF=0.089;AN=56;BaseQRankSum=5.938;DP=687;FS=3.606;HRun=0;HaplotypeScore=276.1305;InbreedingCoeff=0.3587;MQ=49.55;MQ0=23;MQRankSum=-1.388;QD=11.17;ReadPosRankSum=-0.658;VQSLOD=2.2556;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:11.60:0,12,142	0/0:7,0:7:15.11:0,15,496	0/0:30,0:7:12.97:0,13,185	0/0:39,0:15:32.79:0,33,626	0/0:32,0:32:81.21:0,81,3408	0/0:23,0:23:38.88:0,39,763	0/0:26,0:25:32.67:0,33,589	0/1:27,0:21:44.32:44,0,56	0/0:19,0:20:17.96:0,18,272	0/0:28,0:27:71.98:0,72,1275	0/0:19,0:21:20.73:0,21,479	0/0:25,0:25:56.69:0,57,1216	0/0:31,0:32:63.17:0,63,1433	0/0:30,0:30:62.97:0,63,1188	0/0:45,0:46:50.86:0,51,968	0/0:26,0:29:49.58:0,50,1045	0/0:12,0:12:18.01:0,18,341	0/0:14,0:14:41.70:0,42,716	0/1:16,5:18:59.64:140,0,60	0/1:11,4:14:5.59:535,0,6	1/1:12,3:15:9.86:270,10,0	0/0:28,0:28:41.96:0,42,898	0/0:20,0:19:20.09:0,20,669	0/0:43,0:42:57.03:0,57,1247	0/0:17,0:17:42.08:0,42,1548	0/0:20,0:20:57.18:0,57,2518	0/0:35,0:35:72.12:0,72,2463	0/0:9,0:9:15:0,15,443
chr10	19390152	.	TACACAC	T	5626.97	PASS	AB=0.749;AC=29;AF=0.537;AN=54;BaseQRankSum=-0.336;DP=679;FS=22.512;HRun=0;HaplotypeScore=186.4363;InbreedingCoeff=0.5737;MQ=49.69;MQ0=23;MQRankSum=-8.127;QD=13.86;ReadPosRankSum=1.686;VQSLOD=2.6817;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:2.73:0,3,45	0/0:5,0:8:5.97:0,6,58	0/0:30,0:8:3.01:0,3,48	0/0:40,0:16:12.84:0,13,203	0/0:17,0:32:57.19:0,57,858	1/1:12,12:24:15.52:312,16,0	1/1:13,12:24:12.93:250,13,0	./.	0/0:20,0:20:2.32:0,2,71	1/1:16,11:26:32.90:569,33,0	0/0:11,11:22:0:0,0,0	0/1:15,11:27:47.83:265,0,48	1/1:14,15:29:39.13:805,39,0	1/1:10,20:31:37.33:718,37,0	1/1:18,0:47:42.04:582,42,0	1/1:12,17:29:32.69:571,33,0	0/1:8,5:13:29.86:56,0,30	0/1:11,3:15:74.98:167,0,75	1/1:18,0:17:3.01:42,3,0	1/1:14,0:13:12.04:167,12,0	1/1:15,0:15:5.04:36,5,0	1/1:14,15:28:21.54:432,22,0	1/1:10,10:19:18.06:370,18,0	1/1:23,17:41:15.05:285,15,0	0/0:8,0:17:27.08:0,27,360	0/0:6,0:19:18.81:0,19,631	0/0:12,0:35:39.61:0,40,480	0/0:4,0:5:5.27:0,5,77
chr10	19391727	.	C	CA	5475.03	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-13.108;DP=698;FS=10.059;HRun=0;HaplotypeScore=67.6697;InbreedingCoeff=0.9981;MQ=83.85;MQ0=0;MQRankSum=-1.851;QD=45.63;ReadPosRankSum=-2.122;VQSLOD=3.5955;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,105,1435	0/0:8,0:8:24.08:0,24,334	0/0:14,0:14:42.14:0,42,587	0/0:27,0:27:78.26:0,78,1088	0/0:19,0:19:54.18:0,54,755	0/0:20,0:20:60.17:0,60,804	0/0:36,0:36:99:0,105,1468	1/1:1,32:33:96.31:1510,96,0	0/0:30,0:30:87.27:0,87,1197	0/0:20,0:20:57.19:0,57,796	0/0:16,0:16:48.16:0,48,670	0/0:31,0:31:93.25:0,93,1219	0/0:27,0:27:81.27:0,81,1115	0/0:40,0:40:99:0,120,1635	0/0:33,0:33:99:0,99,1352	0/0:27,0:27:78.24:0,78,1058	0/0:22,0:22:66.22:0,66,923	0/0:31,0:31:90.30:0,90,1257	1/1:1,24:25:75.25:1183,75,0	1/1:1,23:24:66.23:1055,66,0	1/1:0,38:38:99:1727,108,0	0/0:16,0:16:45.14:0,45,613	0/0:10,0:10:30.10:0,30,420	0/0:43,0:43:99:0,129,1785	0/0:25,0:25:75.25:0,75,1049	0/0:24,0:24:72.23:0,72,991	0/0:17,0:17:51.16:0,51,694	0/0:7,0:7:21.05:0,21,276
chr10	19392326	.	AG	A	2993.37	PASS	AB=0.887;AC=24;AF=0.429;AN=56;BaseQRankSum=1.019;DP=601;FS=9.954;HRun=11;HaplotypeScore=89.0508;InbreedingCoeff=0.5846;MQ=71.00;MQ0=0;MQRankSum=1.500;QD=9.35;ReadPosRankSum=6.485;VQSLOD=1.6928;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:12,24:37:61.95:498,62,0	1/1:3,8:12:23.01:178,23,0	0/0:19,0:17:26.05:0,26,230	0/0:8,0:8:11.90:0,12,108	1/1:8,17:25:53.93:443,54,0	1/1:4,15:20:29:227,29,0	1/1:5,20:26:52.97:425,53,0	0/0:18,0:18:26.83:0,27,236	1/1:3,9:12:23.97:197,24,0	0/0:19,0:19:13.27:0,13,124	0/0:14,0:14:15.01:0,15,145	0/0:20,0:20:14.30:0,14,229	0/0:20,1:21:11.39:0,11,306	0/0:22,0:23:41.86:0,42,389	0/0:28,2:30:38.35:0,38,558	0/0:27,0:27:30.39:0,30,521	0/1:25,2:27:25.84:26,0,344	0/0:25,0:27:50.96:0,51,526	0/1:17,2:19:7:7,0,155	0/1:19,0:19:28.27:28,0,103	0/0:20,4:25:8.41:0,8,278	0/1:20,1:22:1.43:1,0,203	0/1:17,2:19:10.36:10,0,183	0/0:25,4:29:32.39:0,32,526	1/1:2,17:19:32.96:271,33,0	1/1:10,14:26:45.79:336,46,0	1/1:13,14:27:37.16:466,37,0	0/1:5,5:10:14.96:87,0,15
chr10	19393320	.	G	GA	505.93	PASS	AB=0.983;AC=7;AF=0.125;AN=56;BaseQRankSum=7.364;DP=581;FS=4.662;HRun=10;HaplotypeScore=82.8416;InbreedingCoeff=0.2205;MQ=82.52;MQ0=0;MQRankSum=-2.964;QD=3.86;ReadPosRankSum=-1.514;VQSLOD=0.3483;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:45,0:45:76.38:478,76,0	0/0:10,0:10:12.99:0,13,175	0/1:21,0:19:6.47:6,0,142	0/1:20,0:21:9.33:9,0,114	0/0:22,0:23:49.93:0,50,396	0/0:23,0:23:50.91:0,51,418	0/0:26,0:27:11.04:0,11,442	0/0:26,0:26:14.58:0,15,274	0/1:16,0:16:25.41:126,0,25	0/0:21,0:21:44.92:0,45,368	0/0:18,3:21:49.41:0,49,400	0/0:25,0:25:59.86:0,60,489	0/0:14,0:14:19.97:0,20,154	0/0:19,0:19:7.80:0,8,326	0/1:20,2:22:4.11:4,0,373	0/0:20,3:23:21.51:0,22,366	0/0:24,0:24:42.05:0,42,445	0/0:10,0:10:29.93:0,30,241	0/0:18,0:18:40.82:0,41,309	0/0:19,0:19:41.90:0,42,339	0/0:21,0:22:52.95:0,53,425	0/0:20,0:20:44.77:0,45,357	0/0:19,1:20:44.91:0,45,367	0/0:26,0:26:62.83:0,63,510	0/0:17,0:17:38.93:0,39,319	0/0:23,0:24:52.83:0,53,415	0/0:18,0:18:47.67:0,48,372	0/1:5,0:5:3.90:4,0,62
chr10	19393330	.	A	AC	1643.13	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.133;DP=589;FS=2.377;HRun=2;HaplotypeScore=74.7728;InbreedingCoeff=0.8526;MQ=83.74;MQ0=0;MQRankSum=-2.804;QD=28.83;ReadPosRankSum=1.590;VQSLOD=3.4420;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,40:41:99:1343,102,0	0/0:11,0:11:30.03:0,30,336	0/0:25,0:23:4.55:0,5,321	0/0:21,0:20:3.12:0,3,261	0/0:19,0:19:53.97:0,54,609	0/0:21,0:21:63.15:0,63,729	0/0:26,0:26:64.24:0,64,795	0/0:28,0:28:60.49:0,60,650	1/1:3,12:16:31.91:421,32,0	0/0:18,0:18:54.15:0,54,635	0/0:23,0:23:62.99:0,63,699	0/0:27,0:27:66.12:0,66,768	0/0:13,0:13:32.94:0,33,338	0/0:19,0:19:52.38:0,52,601	0/0:25,0:25:47.49:0,47,641	0/0:25,0:25:61.32:0,61,723	0/0:27,0:27:77.39:0,77,862	0/0:12,0:12:36.09:0,36,416	0/0:17,0:17:45.12:0,45,522	0/0:16,0:16:45.02:0,45,518	0/0:23,0:23:69.08:0,69,773	0/0:21,0:21:54.09:0,54,609	0/0:23,0:23:60.07:0,60,667	0/0:25,0:25:69.17:0,69,810	0/0:19,0:19:51.10:0,51,577	0/0:22,0:22:63.06:0,63,707	0/0:21,0:21:57.11:0,57,629	0/0:5,0:5:14.38:0,14,141
chr10	19393564	.	A	AT	2759.61	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-12.946;DP=694;FS=0.883;HRun=8;HaplotypeScore=67.7778;InbreedingCoeff=0.9947;MQ=76.17;MQ0=0;MQRankSum=-0.277;QD=29.36;ReadPosRankSum=-2.640;VQSLOD=2.9488;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,134,1354	0/0:10,0:10:30.02:0,30,275	0/0:15,0:15:27:0,27,246	0/0:14,0:14:29.89:0,30,255	0/0:25,0:26:71.05:0,71,630	0/0:16,0:16:47.99:0,48,432	0/0:27,0:27:69.01:0,69,626	1/1:4,31:35:93.25:1052,93,0	0/0:24,0:24:59.20:0,59,543	0/0:36,0:35:93.04:0,93,848	0/0:20,0:20:57.03:0,57,520	0/0:23,0:23:60.02:0,60,549	0/0:19,0:19:57.03:0,57,522	0/0:27,0:27:72.02:0,72,654	0/0:27,0:27:69.03:0,69,632	0/0:33,0:33:87.02:0,87,790	0/0:40,0:40:99:0,114,1039	0/0:16,0:16:45.02:0,45,412	1/1:1,9:10:27.08:312,27,0	1/1:1,27:28:78.23:898,78,0	1/1:1,20:21:57.17:658,57,0	0/0:33,0:33:62.48:0,62,817	0/0:23,0:23:63.03:0,63,577	0/0:26,0:26:71.99:0,72,647	0/0:26,0:27:74.07:0,74,661	0/0:33,0:33:90.05:0,90,824	0/0:25,0:25:72.01:0,72,654	0/0:6,0:6:15.01:0,15,137
chr10	19394176	.	AC	A	7188.20	PASS	AB=0.556;AC=33;AF=0.589;AN=56;BaseQRankSum=8.197;DP=671;FS=13.023;HRun=9;HaplotypeScore=83.2592;InbreedingCoeff=0.8969;MQ=83.03;MQ0=1;MQRankSum=-4.706;QD=17.49;ReadPosRankSum=5.850;VQSLOD=3.7677;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:46,1:47:63.13:0,63,1094	0/0:7,0:7:21.05:0,21,233	0/0:26,1:27:42.25:0,42,693	0/0:27,0:26:0.92:0,1,430	0/0:18,0:18:36.09:0,36,405	1/1:5,24:29:75.03:686,75,0	1/1:4,23:27:60.03:549,60,0	1/1:9,0:27:29.05:92,29,0	0/0:20,0:20:60.13:0,60,665	1/1:6,12:17:39:356,39,0	0/1:2,8:10:10.70:167,0,11	1/1:3,28:31:90.01:813,90,0	1/1:4,16:20:48.02:439,48,0	1/1:1,28:29:69.03:631,69,0	0/0:24,0:24:57.16:0,57,645	1/1:3,26:29:72.03:659,72,0	1/1:2,29:31:75.04:686,75,0	1/1:1,14:15:36.02:329,36,0	1/1:6,0:17:22.40:66,22,0	1/1:3,0:27:50.37:157,50,0	1/1:1,0:36:61.11:179,61,0	1/1:2,17:19:48.02:439,48,0	1/1:3,12:16:32.04:281,32,0	1/1:4,26:30:72.03:659,72,0	0/0:26,0:26:66.17:0,66,737	0/0:25,0:25:48.14:0,48,553	0/0:28,0:28:78.12:0,78,846	0/0:11,0:11:26.98:0,27,271
chr10	19395108	.	A	AGG	3725.52	PASS	AB=0.687;AC=13;AF=0.232;AN=56;BaseQRankSum=14.504;DP=687;FS=1.490;HRun=0;HaplotypeScore=175.9946;InbreedingCoeff=-0.3028;MQ=63.10;MQ0=0;MQRankSum=-13.295;QD=11.46;ReadPosRankSum=5.309;VQSLOD=3.4457;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,132,2119	0/0:15,0:15:45.13:0,45,681	0/0:7,0:6:18.03:0,18,233	0/0:16,0:16:32.13:0,32,385	0/0:34,0:34:99:0,99,1541	0/1:12,16:28:99:424,0,171	0/1:14,12:26:99:233,0,235	0/0:37,0:37:99:0,101,1068	0/0:16,0:16:48.16:0,48,761	0/1:16,19:35:99:567,0,174	0/1:16,12:28:99:132,0,105	0/1:8,8:16:76.05:192,0,76	0/1:16,16:32:99:447,0,101	0/1:19,13:32:99:355,0,258	0/0:34,0:34:99:0,102,1612	0/1:12,10:22:99:330,0,124	0/1:11,11:22:93.05:274,0,93	0/1:8,5:14:42.95:221,0,43	0/0:15,0:15:40.39:0,40,402	0/0:30,0:30:71.19:0,71,627	0/0:20,0:20:25.27:0,25,217	0/1:9,11:21:85.85:230,0,86	0/1:16,11:27:99:182,0,112	0/1:17,5:22:33.54:138,0,34	0/0:22,0:22:66.23:0,66,1072	0/0:33,0:33:96.07:0,96,1510	0/0:20,0:20:60.20:0,60,976	0/0:18,0:18:54.18:0,54,881
chr10	19395109	.	A	AGACCCAG	26971.67	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=5.139;DP=695;FS=9.187;HRun=0;HaplotypeScore=189.9264;InbreedingCoeff=0.9934;MQ=63.15;MQ0=0;MQRankSum=-16.313;QD=61.86;ReadPosRankSum=-5.799;VQSLOD=2.7224;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,126,2875	0/0:15,0:15:36.10:0,36,798	0/0:8,0:7:12.04:0,12,283	0/0:15,0:15:16.11:0,16,294	0/0:32,0:32:93.29:0,93,2105	1/1:12,0:28:78.09:2294,78,0	1/1:14,0:26:65.99:1790,66,0	1/1:14,24:41:99:2834,105,0	0/0:16,0:16:48.15:0,48,1135	1/1:15,0:34:96.24:3037,96,0	1/1:17,0:29:41.42:807,41,0	1/1:7,0:15:38.90:1078,39,0	1/1:15,0:31:80.96:2408,81,0	1/1:19,0:32:87.27:2397,87,0	0/0:35,0:35:90.28:0,90,2084	1/1:12,0:22:57.18:1908,57,0	1/1:11,0:22:54.12:1774,54,0	1/1:10,0:15:33.10:1059,33,0	1/1:6,8:17:42.12:1070,42,0	1/1:2,29:32:83.48:1398,83,0	1/1:9,12:23:23.88:346,24,0	1/1:9,0:20:32.94:805,33,0	1/1:16,0:27:43.81:869,44,0	1/1:17,0:22:39.09:1099,39,0	0/0:22,0:22:63.17:0,63,1299	0/0:33,0:33:65.32:0,65,1961	0/0:20,0:20:57.19:0,57,1348	0/0:18,0:18:54.19:0,54,1343
chr10	19395115	.	A	AGGACCC	11836.48	PASS	AB=0.981;AC=18;AF=0.321;AN=56;BaseQRankSum=15.508;DP=698;FS=0.000;HRun=0;HaplotypeScore=212.7001;InbreedingCoeff=-0.3204;MQ=64.42;MQ0=0;MQRankSum=-15.186;QD=27.09;ReadPosRankSum=3.825;VQSLOD=4.3323;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,129,3108	0/0:12,0:12:36.12:0,36,879	0/0:8,0:7:15.05:0,15,323	0/0:16,0:16:13.88:0,14,339	0/0:33,0:33:96.31:0,96,2258	0/1:29,0:29:99:1039,0,152	0/1:25,0:25:99:843,0,155	0/1:43,0:43:99:995,0,234	0/0:17,0:17:51.18:0,51,1215	0/1:36,0:36:99:1308,0,225	0/1:28,0:31:99:271,0,199	0/1:15,0:16:99:533,0,136	0/1:30,0:30:99:1188,0,123	0/1:31,0:31:99:1150,0,169	0/0:35,0:35:96.32:0,96,2271	0/1:18,0:19:81.26:824,0,81	0/1:22,0:25:99:926,0,159	0/1:16,0:16:99:526,0,125	0/1:15,0:15:21.87:385,0,22	0/1:31,0:31:99:395,0,427	0/1:19,0:19:91.04:91,0,96	0/1:21,0:21:99:358,0,149	0/1:27,0:27:99:286,0,172	1/1:18,2:23:11.35:718,11,0	0/0:21,0:21:63.20:0,63,1445	0/0:35,0:35:99:0,102,2311	0/0:21,0:21:63.20:0,63,1474	0/0:18,0:18:54.19:0,54,1330
chr10	19396133	.	A	AT	10873.99	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-15.636;DP=669;FS=6.619;HRun=5;HaplotypeScore=59.6248;InbreedingCoeff=0.9969;MQ=87.06;MQ0=0;MQRankSum=-1.289;QD=34.63;ReadPosRankSum=2.202;VQSLOD=5.2414;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:84.15:0,84,881	0/0:5,0:5:15.04:0,15,161	0/0:26,0:26:66.14:0,66,696	0/0:19,0:19:24.07:0,24,323	0/0:32,0:32:90.19:0,90,955	1/1:2,23:24:66.21:868,66,0	1/1:1,16:17:45.15:592,45,0	0/0:23,0:23:51.10:0,51,530	0/0:26,0:26:75.17:0,75,797	1/1:3,29:32:84.24:1072,84,0	1/1:1,20:21:57.14:729,57,0	1/1:3,25:28:72.23:947,72,0	1/1:2,22:24:66.21:868,66,0	1/1:0,17:17:42.14:552,42,0	0/0:33,0:33:90.19:0,90,944	1/1:1,23:24:66.21:869,66,0	1/1:0,28:28:75.24:987,75,0	1/1:1,19:20:48.16:632,48,0	0/0:14,0:14:32.66:0,33,326	0/0:27,0:27:78.17:0,78,823	0/0:26,0:26:69.12:0,69,723	1/1:2,24:26:69.22:908,69,0	1/1:2,28:30:78.25:1022,78,0	1/1:0,22:22:63.20:828,63,0	0/0:15,0:15:45.11:0,45,484	0/0:21,1:22:20.67:0,21,573	0/0:30,0:30:84.21:0,84,902	0/0:27,0:27:78.13:0,78,811
chr10	19396782	.	CATTATTATTATTATTATT	C	6718.66	PASS	AB=1.000;AC=31;AF=0.574;AN=54;BaseQRankSum=5.943;DP=457;FS=5.970;HRun=0;HaplotypeScore=196.7764;InbreedingCoeff=0.5181;MQ=64.53;MQ0=0;MQRankSum=-3.808;QD=19.03;ReadPosRankSum=-3.259;VQSLOD=2.9752;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:18.06:0,18,532	0/0:3,0:3:9.03:0,9,164	./.	0/0:6,0:6:2.99:0,3,24	0/0:15,0:15:39.12:0,39,817	1/1:14,0:14:12.04:422,12,0	1/1:16,0:16:30.08:675,30,0	1/1:19,17:36:51.08:840,51,0	0/0:8,0:8:9.03:0,9,497	1/1:22,0:22:38.26:795,38,0	1/1:19,0:19:15.05:303,15,0	0/1:23,0:23:34.92:297,0,35	1/1:15,0:15:6.01:143,6,0	0/1:16,0:16:6.97:171,0,7	1/1:31,0:31:12.04:431,12,0	0/1:30,0:30:3.93:589,0,4	0/1:18,0:18:16.98:111,0,17	1/1:18,0:18:6.02:234,6,0	1/1:11,0:11:18.05:449,18,0	1/1:38,0:38:11.97:309,12,0	1/1:12,0:12:18.06:589,18,0	1/1:0,0:9:11.95:129,12,0	1/1:13,0:13:3.01:66,3,0	0/1:12,0:12:71.93:166,0,72	0/0:5,0:11:6.02:0,6,125	0/0:20,0:20:33.11:0,33,615	0/0:11,0:11:18.03:0,18,360	0/0:12,0:12:30.10:0,30,582
chr10	19396798	.	ATTATTATTATTATTATTATTATTGTTGTTG	A	7172.48	PASS	AB=1.000;AC=25;AF=0.446;AN=56;BaseQRankSum=8.378;DP=398;FS=9.928;HRun=0;HaplotypeScore=210.9175;InbreedingCoeff=0.0772;MQ=50.56;MQ0=1;MQRankSum=-3.978;QD=22.84;ReadPosRankSum=3.401;VQSLOD=2.7275;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:11:28.63:0,29,1342	0/0:3,0:3:9.03:0,9,382	0/0:1,0:1:2.99:0,3,24	0/0:1,0:1:3.01:0,3,51	0/0:15,0:15:45.07:0,45,1358	0/1:15,0:15:20.85:671,0,21	0/1:13,0:13:35.74:437,0,36	1/1:19,0:19:5.88:426,6,0	0/0:5,0:5:12.03:0,12,887	0/1:24,0:24:3.69:670,0,4	1/1:17,0:17:15.05:218,15,0	0/1:19,0:19:84.86:494,0,85	1/1:14,0:14:3.01:184,3,0	0/1:18,0:17:32.05:221,0,32	1/1:0,31:31:12.04:654,12,0	0/1:29,0:29:46.89:977,0,47	0/1:20,0:20:71.81:175,0,72	0/1:15,0:15:50.93:352,0,51	1/1:10,0:9:21.52:552,22,0	0/1:26,0:26:44.01:371,0,44	1/1:10,0:10:5.67:460,6,0	0/1:11,0:11:46.75:47,0,50	1/1:11,0:11:3.01:49,3,0	0/1:12,0:12:99:216,0,167	0/0:9,0:9:12.03:0,12,336	0/0:18,0:18:43.30:0,43,1708	0/0:9,0:9:24.07:0,24,788	0/0:11,0:11:33.11:0,33,1184
chr10	19396801	.	ATTATTATTATTATTATTATTGTTGTTGTTG	A	9095.72	PASS	AB=0.994;AC=28;AF=0.519;AN=54;BaseQRankSum=7.071;DP=427;FS=7.261;HRun=0;HaplotypeScore=216.2936;InbreedingCoeff=0.3440;MQ=50.06;MQ0=2;MQRankSum=-2.083;QD=26.67;ReadPosRankSum=2.050;VQSLOD=3.0256;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:11:27.06:0,27,1215	0/0:3,0:3:9.03:0,9,358	./.	0/0:1,0:1:2.99:0,3,24	0/0:15,0:15:45:0,45,1167	0/1:16,0:16:3.03:740,0,3	1/1:12,0:12:3.64:643,4,0	1/1:23,0:23:50.96:840,51,0	0/0:5,0:5:9.03:0,9,847	1/1:26,0:26:26.12:1004,26,0	1/1:21,0:21:14.94:303,15,0	0/1:21,0:21:34.92:547,0,35	1/1:15,0:15:6.48:227,6,0	0/1:18,0:18:6.97:255,0,7	1/1:31,0:31:12.04:586,12,0	0/1:31,0:30:7.16:1084,0,7	0/1:21,0:21:31.02:192,0,31	0/1:16,0:16:10.10:392,0,10	1/1:4,9:12:26.86:746,27,0	1/1:3,25:28:20.80:523,21,0	1/1:12,0:12:17.53:588,18,0	0/1:11,0:11:12.82:111,0,13	1/1:11,0:11:1.73:63,2,0	0/1:14,0:14:71.93:250,0,72	0/0:10,0:10:12.04:0,12,416	0/0:19,0:18:40.63:0,41,1515	0/0:9,0:9:21.04:0,21,639	0/0:11,0:11:33.11:0,33,975
chr10	19396804	.	ATTATTATTATTATTATTGTTGTTGTTGTTGTTGTTG	A	9956.94	PASS	AB=1.000;AC=32;AF=0.615;AN=52;BaseQRankSum=5.593;DP=433;FS=7.603;HRun=0;HaplotypeScore=250.2518;InbreedingCoeff=0.5010;MQ=50.24;MQ0=2;MQRankSum=-3.609;QD=28.69;ReadPosRankSum=2.248;VQSLOD=2.6731;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:11:30.10:0,30,1516	0/0:3,0:3:9.03:0,9,476	./.	./.	0/0:16,0:16:39.11:0,39,1411	1/1:2,16:18:11.90:1073,12,0	1/1:12,0:12:29.77:846,30,0	0/1:25,0:24:14.07:419,0,14	0/0:6,0:6:15.05:0,15,1504	1/1:3,24:27:53.92:1546,54,0	1/1:1,21:22:10.71:522,11,0	1/1:1,20:21:9.03:800,9,0	1/1:1,16:17:3.01:281,3,0	1/1:4,15:18:6.01:341,6,0	1/1:31,0:31:11.40:147,11,0	1/1:3,29:31:17.97:1583,18,0	1/1:2,20:22:2.92:280,3,0	1/1:2,14:16:5.90:562,6,0	0/1:13,0:12:99:305,0,159	0/1:27,0:27:99:149,0,122	0/1:12,0:12:99:446,0,210	1/1:11,0:11:11.80:196,12,0	1/1:0,11:11:0.33:98,0,0	1/1:1,10:11:6.02:363,6,0	0/0:9,0:9:12.04:0,12,578	0/0:19,0:18:53.97:0,54,2284	0/0:9,0:9:20.89:0,21,790	0/0:11,0:11:32.84:0,33,1199
chr10	19396813	.	ATTATTATTGTTGTTG	A	5703.12	PASS	AB=1.000;AC=47;AF=0.904;AN=52;BaseQRankSum=3.593;DP=444;FS=3.693;HRun=0;HaplotypeScore=170.3761;InbreedingCoeff=0.1368;MQ=48.98;MQ0=6;MQRankSum=-1.962;QD=13.08;ReadPosRankSum=2.350;VQSLOD=3.9082;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:14,0:13:99:99,0,291	1/1:4,0:4:12.04:250,12,0	./.	./.	0/1:13,0:13:38.91:99,0,39	1/1:18,0:18:12.04:368,12,0	1/1:11,0:11:26.91:253,27,0	1/1:34,0:30:11.30:60,11,0	0/0:8,0:8:20.99:0,21,362	1/1:28,0:28:24.60:416,25,0	1/1:23,0:22:14.96:147,15,0	1/1:21,0:20:9.03:271,9,0	1/1:16,0:16:3.01:105,3,0	1/1:18,0:17:6.02:118,6,0	1/1:31,0:31:12.04:214,12,0	1/1:31,0:30:18.06:526,18,0	1/1:21,0:21:3.01:104,3,0	1/1:16,0:16:6.02:209,6,0	1/1:14,0:13:12.04:260,12,0	1/1:28,0:27:11.93:176,12,0	1/1:14,0:14:18.37:233,18,0	1/1:11,0:11:2.92:17,3,0	1/1:11,0:11:2.32:32,2,0	1/1:10,0:10:6.02:136,6,0	1/1:9,0:9:9.02:148,9,0	1/1:4,18:21:48.06:869,48,0	1/1:7,0:7:15.05:227,15,0	0/1:11,0:11:13.89:366,0,14
chr10	19396816	.	ATTATTGTTG	A	3062.20	PASS	AB=1.000;AC=49;AF=0.942;AN=52;BaseQRankSum=2.689;DP=455;FS=0.000;HRun=0;HaplotypeScore=150.7420;InbreedingCoeff=0.0543;MQ=48.57;MQ0=12;MQRankSum=-1.094;QD=6.73;ReadPosRankSum=-0.137;VQSLOD=2.5677;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:14,0:12:42.08:71,0,42	1/1:4,0:4:11.92:116,12,0	./.	./.	1/1:3,11:14:28.90:202,29,0	1/1:19,0:18:11.97:207,12,0	1/1:11,0:11:12.69:74,13,0	1/1:35,0:30:2.13:5,2,0	0/1:10,0:10:15.42:15,0,36	1/1:29,0:28:23.65:236,24,0	1/1:23,0:22:11.65:66,12,0	1/1:21,0:20:9:148,9,0	1/1:16,0:16:3:63,3,0	1/1:18,0:17:5.93:59,6,0	1/1:31,0:31:11.78:114,12,0	1/1:31,0:30:17.93:287,18,0	1/1:21,0:21:3.01:62,3,0	1/1:16,0:16:6.02:126,6,0	1/1:15,0:14:11.63:155,12,0	1/1:28,0:27:5.93:79,6,0	1/1:14,0:14:20.35:139,20,0	0/1:11,0:11:0:0,0,0	1/1:13,0:11:2.63:15,3,0	1/1:10,0:10:5.93:77,6,0	1/1:9,0:9:7.56:77,8,0	1/1:23,0:22:47.82:468,48,0	1/1:8,0:8:14.93:123,15,0	1/1:11,0:11:7.86:179,8,0
chr10	19396864	.	GTTGTTGTTA	G	896.06	PASS	AB=0.984;AC=18;AF=0.321;AN=56;BaseQRankSum=9.499;DP=467;FS=3.104;HRun=0;HaplotypeScore=137.4277;InbreedingCoeff=-0.3713;MQ=55.96;MQ0=11;MQRankSum=-3.551;QD=3.27;ReadPosRankSum=7.121;VQSLOD=2.0737;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:13:35.96:0,36,446	0/1:5,0:5:58.95:60,0,59	0/0:13,0:10:29.95:0,30,279	0/0:17,0:13:25.29:0,25,281	0/1:10,0:10:11.38:11,0,120	0/1:21,0:20:80.46:109,0,80	0/0:10,0:10:29.96:0,30,257	0/0:30,0:28:80.60:0,81,749	0/0:18,0:18:51.01:0,51,590	0/1:20,0:19:83.54:84,0,156	0/0:24,0:24:26.78:0,27,205	0/1:20,0:20:71.38:71,0,107	0/1:17,0:16:33.15:33,0,45	0/1:19,0:19:31.01:31,0,86	0/1:29,0:29:8.13:8,0,307	0/1:34,0:34:99:149,0,127	0/1:22,0:22:18.57:19,0,169	0/1:13,0:13:62.75:63,0,124	0/1:12,0:10:92.50:92,0,137	0/0:33,0:32:3.58:0,4,328	0/0:19,0:18:17.89:0,18,326	0/1:6,0:6:12.81:13,0,107	0/0:14,0:13:9.46:0,9,76	1/1:7,0:7:3.01:43,3,0	0/1:8,0:8:24.59:25,0,135	0/1:19,0:19:79.43:205,0,79	0/1:8,4:11:37.54:38,0,141	0/0:1,0:1:3.01:0,3,58
chr10	19400514	.	T	TGG	16590.19	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-3.084;DP=823;FS=0.891;HRun=7;HaplotypeScore=150.6151;InbreedingCoeff=0.9942;MQ=88.79;MQ0=0;MQRankSum=-4.182;QD=30.67;ReadPosRankSum=5.249;VQSLOD=3.2798;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,0:10:22.46:79,22,0	1/1:3,0:13:23.95:93,24,0	0/0:32,0:32:90.03:0,90,1006	0/0:26,0:26:63.09:0,63,704	1/1:5,1:29:61.73:283,62,0	1/1:5,25:30:60.20:984,60,0	1/1:3,27:30:69.24:1132,69,0	0/0:48,0:48:99:0,138,1608	0/0:33,0:33:99:0,99,1132	1/1:6,30:36:87.16:1403,87,0	1/1:2,21:24:57.19:935,57,0	1/1:7,35:42:99:1723,105,0	1/1:2,26:28:72.25:1180,72,0	1/1:3,34:37:96.33:1575,96,0	0/0:39,0:39:93.26:0,93,1084	1/1:5,34:40:99:1618,99,0	1/1:4,22:26:60.20:985,60,0	1/1:2,15:18:44.64:698,45,0	0/0:30,0:30:81.23:0,81,944	0/0:37,0:37:99:0,102,1187	0/0:37,0:37:99:0,108,1246	1/1:6,28:34:78.27:1280,78,0	1/1:5,25:30:66.23:1083,66,0	1/1:3,16:18:48.16:788,48,0	1/1:0,0:18:34.93:123,35,0	1/1:5,1:31:59.49:307,59,0	1/1:3,0:40:78.85:279,79,0	1/1:0,0:6:12.20:42,12,0
chr10	19401938	.	T	TG	17501.70	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-6.315;DP=666;FS=3.441;HRun=7;HaplotypeScore=68.7328;InbreedingCoeff=0.8964;MQ=82.27;MQ0=0;MQRankSum=-8.024;QD=28.00;ReadPosRankSum=5.890;VQSLOD=5.1339;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:1,29:30:72.22:870,72,0	1/1:3,9:12:1.48:298,1,0	0/0:19,0:19:48:0,48,444	0/0:22,0:22:33.03:0,33,312	1/1:1,19:20:54.17:651,54,0	1/1:2,24:26:69.21:832,69,0	1/1:1,21:22:57.17:685,57,0	1/1:5,26:31:52.25:900,52,0	1/1:0,20:20:54.17:652,54,0	1/1:7,25:32:78.19:911,78,0	1/1:1,14:15:33.10:398,33,0	1/1:2,12:14:36.11:435,36,0	1/1:5,29:34:72.22:868,72,0	1/1:2,24:26:66.19:795,66,0	1/1:4,20:24:31.21:659,31,0	1/1:4,19:23:51.16:616,51,0	1/1:4,2:37:74.75:380,75,0	1/1:0,28:28:75.23:906,75,0	1/1:3,17:20:48.15:578,48,0	1/1:2,28:31:78.03:903,78,0	1/1:7,23:30:63.19:761,63,0	1/1:2,16:18:48.15:579,48,0	1/1:5,17:22:51.03:597,51,0	1/1:3,14:17:42.13:507,42,0	1/1:2,22:24:66.20:793,66,0	1/1:5,23:28:66.19:783,66,0	1/1:4,25:28:72.19:855,72,0	1/1:1,11:12:24.07:290,24,0
chr10	19404460	.	CAGAGAGAGAG	C	8656.47	PASS	AB=0.857;AC=21;AF=0.375;AN=56;BaseQRankSum=-7.162;DP=742;FS=7.872;HRun=0;HaplotypeScore=254.1965;InbreedingCoeff=0.4410;MQ=67.67;MQ0=13;MQRankSum=1.969;QD=24.05;ReadPosRankSum=7.384;VQSLOD=2.4262;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:26:24.91:0,25,560	0/0:11,0:11:24.08:0,24,667	0/0:40,0:23:21.48:0,21,309	0/0:63,0:28:6.04:0,6,304	0/0:27,0:25:36.07:0,36,812	1/1:22,2:22:45.41:1091,45,0	0/1:18,2:19:12.21:289,0,12	0/0:30,0:30:27.08:0,27,390	1/1:12,0:17:17.95:195,18,0	1/1:31,3:36:12.19:1051,12,0	0/1:21,3:25:22.26:588,0,22	1/1:20,3:23:22.42:435,22,0	1/1:29,1:31:7.58:1217,8,0	0/1:24,4:29:12.31:602,0,12	0/0:19,0:22:22.96:0,23,360	0/1:18,2:20:14.13:691,0,14	1/1:36,1:35:42.78:1043,43,0	0/1:23,1:24:99:714,0,141	0/0:28,0:29:50.94:0,51,957	0/0:24,0:24:24.12:0,24,336	0/0:11,0:11:12.01:0,12,202	0/1:5,18:23:33.28:53,0,33	1/1:18,3:21:24.56:496,25,0	0/1:27,1:26:53.16:192,0,53	0/0:23,0:24:42.13:0,42,1104	0/0:22,0:22:48.16:0,48,1468	0/0:36,0:38:82.44:0,82,1474	0/0:8,0:9:21.05:0,21,489
chr10	19404482	.	G	GAC	6194.40	PASS	AB=0.848;AC=22;AF=0.393;AN=56;BaseQRankSum=1.325;DP=750;FS=2.949;HRun=0;HaplotypeScore=212.6163;InbreedingCoeff=0.3393;MQ=47.86;MQ0=15;MQRankSum=1.405;QD=14.61;ReadPosRankSum=3.377;VQSLOD=4.9067;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:26:24:0,24,317	0/0:17,0:14:21.12:0,21,251	0/0:19,0:7:20.94:0,21,230	0/0:37,0:11:5.78:0,6,193	0/0:29,0:27:36.02:0,36,416	1/1:22,7:27:12.30:623,12,0	0/1:20,4:22:19.59:210,0,20	0/0:33,0:32:77.48:0,77,530	0/0:17,0:17:10.27:0,10,68	0/1:27,7:34:24:689,0,24	1/1:27,5:30:9.16:411,9,0	1/1:13,5:18:20.18:359,20,0	0/1:18,14:32:21.81:900,0,22	1/1:16,15:31:34.42:654,34,0	0/1:25,0:25:35.11:35,0,274	1/1:11,6:17:5.40:405,5,0	1/1:24,15:37:20.50:865,21,0	0/1:19,9:28:98.92:428,0,99	0/0:29,0:29:49.53:0,50,434	0/0:30,0:29:7.75:0,8,208	0/0:13,0:13:17.35:0,17,161	0/1:27,1:28:29.62:77,0,30	1/1:19,4:22:13.44:354,13,0	0/1:13,12:23:7.15:150,0,7	0/0:26,0:25:30.06:0,30,518	0/0:32,0:30:19.90:0,20,687	0/1:39,0:39:34.61:35,0,761	0/0:13,0:13:8.70:0,9,263
chr10	19404488	.	G	GAC	8399.67	PASS	AB=0.982;AC=35;AF=0.625;AN=56;BaseQRankSum=4.579;DP=723;FS=13.871;HRun=0;HaplotypeScore=206.4616;InbreedingCoeff=0.0931;MQ=46.43;MQ0=12;MQRankSum=0.156;QD=14.21;ReadPosRankSum=-0.421;VQSLOD=3.6180;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:28:4.02:0,4,250	0/1:17,0:14:55.66:56,0,168	0/0:13,0:5:11.93:0,12,131	0/0:30,0:9:11.01:0,11,191	0/0:27,0:27:17.75:0,18,305	1/1:29,0:27:59.14:833,59,0	0/1:24,0:22:11.25:317,0,11	0/1:35,0:34:91.72:92,0,181	0/1:15,0:15:14.71:15,0,45	1/1:30,0:30:9.53:756,10,0	1/1:29,0:27:24.11:422,24,0	1/1:15,0:15:10.74:307,11,0	1/1:32,0:32:30.06:951,30,0	1/1:31,0:31:46.27:715,46,0	0/1:26,0:26:34.76:308,0,35	1/1:17,0:17:27.53:504,28,0	1/1:39,0:37:82.72:1103,83,0	1/1:26,0:27:15.12:638,15,0	0/1:22,7:29:99:142,0,210	0/1:31,0:30:98.17:111,0,98	0/1:12,0:12:6.07:160,0,6	1/1:26,0:26:12.48:140,12,0	1/1:19,0:18:7.42:326,7,0	1/1:25,0:23:2.23:214,2,0	0/0:28,0:27:26.30:0,26,404	0/1:31,0:29:99:130,0,379	0/1:40,0:39:99:101,0,567	0/1:12,0:12:60.11:60,0,178
chr10	19404492	.	GAC	G	203.35	PASS	AB=0.963;AC=10;AF=0.179;AN=56;BaseQRankSum=-2.785;DP=701;FS=60.664;HRun=0;HaplotypeScore=229.2232;InbreedingCoeff=-0.2118;MQ=45.33;MQ0=11;MQRankSum=-2.800;QD=0.92;ReadPosRankSum=-1.079;VQSLOD=0.6328;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:28:25.20:0,25,333	0/1:16,0:13:4.61:5,0,240	0/1:10,0:4:0.25:0,0,96	0/0:23,0:7:11.65:0,12,159	0/0:26,0:24:29.90:0,30,342	0/0:28,0:27:2.54:0,3,221	0/0:27,0:25:31.16:0,31,271	0/1:34,0:33:8.74:9,0,204	0/0:14,0:14:15.92:0,16,208	0/0:29,2:31:66.73:0,67,462	0/1:28,0:26:10.41:10,0,156	0/0:15,1:16:9.01:0,9,90	0/0:30,1:31:23.45:0,23,319	0/0:32,0:32:1.32:0,1,149	0/1:25,2:27:57.57:58,0,248	0/0:16,0:16:34.34:0,34,229	0/0:38,1:37:54.52:0,55,351	0/0:27,0:27:30.54:0,31,345	0/1:26,0:26:99:100,0,155	0/1:27,2:28:98.32:120,0,98	0/1:9,4:13:17.14:17,0,149	0/0:26,0:26:4.45:0,4,49	0/0:18,0:17:13.78:0,14,91	0/1:25,0:23:7.33:7,0,82	0/0:29,0:28:22.74:0,23,520	0/0:32,0:30:65.49:0,65,847	0/0:33,0:32:34.36:0,34,811	0/1:13,0:13:1.81:2,0,241
chr10	19404504	.	GAC	G	503.24	PASS	AB=0.936;AC=13;AF=0.232;AN=56;BaseQRankSum=4.586;DP=645;FS=7.842;HRun=0;HaplotypeScore=211.1073;InbreedingCoeff=-0.2786;MQ=44.41;MQ0=12;MQRankSum=-3.715;QD=1.76;ReadPosRankSum=-0.737;VQSLOD=1.3943;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:18,11:26:43.13:43,0,120	0/1:16,0:13:12.36:12,0,323	0/1:6,0:3:0.82:1,0,51	0/0:10,0:5:4.40:0,4,86	0/1:22,5:25:6.40:6,0,253	0/0:22,0:21:48.01:0,48,611	0/0:24,0:22:32.75:0,33,455	0/0:37,0:35:74.97:0,75,1445	0/1:10,0:10:50.83:63,0,51	0/0:27,0:27:67.77:0,68,867	0/0:20,0:18:20.93:0,21,243	0/0:17,0:17:16.79:0,17,240	0/0:30,0:29:60.82:0,61,588	0/0:30,0:30:49.98:0,50,456	0/1:28,0:28:25.01:25,0,793	0/0:16,0:16:41.07:0,41,442	0/0:34,0:32:75.20:0,75,894	0/0:26,0:26:63.19:0,63,741	0/1:22,0:22:11.20:11,0,680	0/1:30,0:29:99:109,0,447	0/1:15,0:15:1.05:1,0,534	0/0:21,0:21:8.20:0,8,145	0/0:20,0:19:26.98:0,27,281	0/0:25,0:24:16.50:0,17,183	0/1:30,0:29:13.59:14,0,398	0/1:26,5:29:55.73:56,0,946	0/1:27,1:27:99:243,0,359	0/1:10,4:14:61.32:61,0,353
chr10	19404506	.	C	CAG	1622.72	PASS	AB=0.889;AC=30;AF=0.536;AN=56;BaseQRankSum=7.994;DP=641;FS=18.152;HRun=0;HaplotypeScore=210.6126;InbreedingCoeff=0.2232;MQ=44.44;MQ0=9;MQRankSum=2.636;QD=3.33;ReadPosRankSum=2.714;VQSLOD=1.5433;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:23,7:27:74.95:84,0,75	0/1:12,4:13:17.25:17,0,212	0/0:4,1:2:6.02:0,6,75	0/0:8,0:4:11.12:0,11,105	0/1:20,6:24:40.09:40,0,103	1/1:22,0:21:10.27:58,10,0	1/1:24,0:22:8.58:42,9,0	0/0:38,0:36:82.40:0,82,988	0/0:10,0:10:1.76:0,2,12	0/1:26,0:26:17.58:18,0,115	1/1:20,0:18:6.83:30,7,0	1/1:18,0:18:9.79:60,10,0	1/1:28,0:27:33.21:191,33,0	1/1:30,1:31:33.34:161,33,0	0/0:26,0:26:28.82:0,29,579	1/1:16,0:16:12.95:91,13,0	1/1:34,0:33:37.64:198,38,0	0/1:24,0:24:1.57:81,0,2	0/0:20,0:20:15.80:0,16,467	0/0:32,0:31:11.80:0,12,396	0/0:15,0:15:38.48:0,38,460	1/1:21,0:21:1.81:21,2,0	1/1:21,0:20:13.86:73,14,0	0/1:24,1:24:3.47:3,0,13	0/1:31,0:30:9.58:10,0,207	0/1:27,4:29:99:166,0,532	0/1:17,10:26:99:395,0,186	0/1:14,2:16:70.49:70,0,208
chr10	19404508	.	GAGAC	G	5581.03	PASS	AB=0.975;AC=34;AF=0.607;AN=56;BaseQRankSum=1.910;DP=637;FS=5.216;HRun=0;HaplotypeScore=203.1267;InbreedingCoeff=0.2737;MQ=45.72;MQ0=9;MQRankSum=1.663;QD=11.30;ReadPosRankSum=2.761;VQSLOD=3.8811;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:29,1:27:75.28:75,0,108	0/1:16,0:13:14.90:15,0,360	0/1:6,0:3:0.49:0,0,87	0/0:8,1:5:15.05:0,15,197	0/1:25,1:24:52.73:53,0,177	1/1:20,2:21:24.28:290,24,0	1/1:25,0:23:26.13:301,26,0	0/0:38,0:36:88.23:0,88,1285	1/1:5,4:9:15.04:237,15,0	0/1:21,4:25:74.40:477,0,74	1/1:19,1:18:5.58:86,6,0	1/1:13,3:16:22.37:306,22,0	1/1:20,7:26:34.23:624,34,0	1/1:23,7:30:46.94:622,47,0	0/0:27,0:27:32.86:0,33,988	1/1:13,3:16:33.37:431,33,0	1/1:29,3:31:18.48:537,18,0	0/1:23,1:24:21.92:353,0,22	0/0:21,0:21:22.51:0,23,821	0/0:32,0:31:5.04:0,5,609	0/0:16,0:16:39.11:0,39,724	1/1:21,1:22:8.24:126,8,0	1/1:20,1:20:18.93:274,19,0	1/1:22,2:23:18.44:249,18,0	0/1:32,0:31:2.66:3,0,333	0/1:31,0:29:99:211,0,945	0/1:24,0:23:99:184,0,301	0/1:16,0:16:99:127,0,276
chr10	19404512	.	C	CAG	8893.26	PASS	AB=0.815;AC=36;AF=0.643;AN=56;BaseQRankSum=-0.163;DP=644;FS=2.994;HRun=0;HaplotypeScore=174.7633;InbreedingCoeff=0.4090;MQ=47.45;MQ0=11;MQRankSum=1.226;QD=18.08;ReadPosRankSum=4.635;VQSLOD=4.8239;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:22,7:26:26.08:130,0,26	0/1:13,4:14:48.36:48,0,148	0/1:10,0:3:1.41:1,0,40	0/0:14,0:10:20.86:0,21,272	0/1:18,6:22:83.74:86,0,84	1/1:7,15:22:39.10:633,39,0	1/1:10,13:21:30.09:524,30,0	0/0:40,0:38:79.32:0,79,859	1/1:7,2:9:15.03:188,15,0	1/1:9,15:24:17.33:848,17,0	1/1:12,8:18:15.05:265,15,0	1/1:9,8:19:22.58:392,23,0	1/1:12,14:25:53.14:783,53,0	1/1:13,15:28:48.06:809,48,0	0/0:28,0:28:58.70:0,59,711	1/1:7,9:16:35.67:512,36,0	1/1:13,20:32:57.14:955,57,0	1/1:8,13:24:38.25:704,38,0	0/0:24,0:24:58.14:0,58,618	0/0:31,0:30:35.75:0,36,456	0/0:15,0:15:37.74:0,38,454	1/1:14,3:17:12.50:208,13,0	1/1:10,10:19:24.08:407,24,0	1/1:16,9:24:17.37:264,17,0	0/1:14,0:33:12.88:13,0,161	0/1:27,5:30:99:465,0,420	0/1:15,9:23:76.28:474,0,76	0/1:13,2:15:63.34:184,0,63
chr10	19404589	.	CTTG	C	699.18	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.288;DP=639;FS=0.000;HRun=0;HaplotypeScore=130.2307;InbreedingCoeff=0.9906;MQ=83.09;MQ0=2;MQRankSum=-0.614;QD=41.13;ReadPosRankSum=1.007;VQSLOD=4.5278;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:96.33:0,96,2209	0/0:17,0:17:51.18:0,51,1176	0/0:23,0:23:32.40:0,32,1055	0/0:14,1:16:39.34:0,39,806	0/0:23,0:23:66.22:0,66,1440	0/0:26,0:26:54.17:0,54,1174	0/0:26,0:26:75.26:0,75,1718	0/0:31,0:31:87.29:0,87,1959	1/1:1,16:17:48.16:794,48,0	0/0:24,0:24:72.25:0,72,1627	0/0:21,0:21:57.19:0,57,1257	0/0:25,0:25:60.21:0,60,1383	0/0:27,0:26:69.24:0,69,1564	0/0:23,0:23:63.20:0,63,1393	0/0:25,0:25:75.26:0,75,1730	0/0:30,0:30:84.29:0,84,1935	0/0:24,0:23:54.18:0,54,1217	0/0:12,0:12:27.55:0,28,545	0/0:26,0:26:63.21:0,63,1429	0/0:31,0:31:90.30:0,90,1982	0/0:18,0:18:54.18:0,54,1179	0/0:18,0:18:54.19:0,54,1221	0/0:26,0:26:60.02:0,60,1328	0/0:26,0:26:72.25:0,72,1582	0/0:24,0:24:36.12:0,36,830	0/0:16,0:16:39.13:0,39,857	0/0:20,0:19:54.18:0,54,1213	0/0:7,0:7:18.06:0,18,414
chr10	19404654	.	GA	G	16518.42	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=8.668;DP=628;FS=0.901;HRun=4;HaplotypeScore=131.6345;InbreedingCoeff=0.9973;MQ=82.83;MQ0=0;MQRankSum=-6.643;QD=30.88;ReadPosRankSum=3.067;VQSLOD=3.4885;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,35:37:90.28:1079,90,0	1/1:2,12:14:36.11:431,36,0	0/0:21,0:21:29.97:0,30,626	0/0:22,0:22:63.07:0,63,807	1/1:0,26:26:69.21:827,69,0	1/1:0,23:23:60.18:719,60,0	1/1:3,23:26:60.18:719,60,0	1/1:5,24:28:69.11:797,69,0	0/0:20,0:20:54.11:0,54,708	1/1:1,28:30:87.21:1010,87,0	1/1:0,21:21:51.16:609,51,0	1/1:0,16:16:45.14:537,45,0	1/1:2,25:27:72.22:863,72,0	1/1:2,20:22:57.17:683,57,0	0/0:30,0:30:87.29:0,87,1218	1/1:3,27:30:72.22:862,72,0	1/1:0,24:24:66.20:792,66,0	1/1:0,7:7:18.06:216,18,0	1/1:2,14:16:42.04:485,42,0	1/1:3,22:25:66.20:790,66,0	1/1:1,19:20:51.16:611,51,0	1/1:0,18:18:54.17:648,54,0	1/1:2,22:24:57.17:679,57,0	1/1:1,18:19:54.17:647,54,0	1/1:0,20:20:51.16:611,51,0	1/1:0,18:18:51.16:611,51,0	1/1:3,30:33:81.25:970,81,0	1/1:0,10:10:27.08:323,27,0
chr10	19406068	.	G	GGAGTAAGTTAATTAGTAAATTGG	1876.58	PASS	AB=0.701;AC=22;AF=0.917;AN=24;BaseQRankSum=-2.949;DP=34;FS=9.997;HRun=0;HaplotypeScore=35.9645;InbreedingCoeff=-0.2369;MQ=177.19;MQ0=1;MQRankSum=-0.888;QD=60.53;ReadPosRankSum=-1.457;VQSLOD=0.1150;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/1:3,0:5:47.76:370,0,48	0/1:6,1:11:1.43:1120,0,1	1/1:1,0:1:3:25,3,0	./.	./.	1/1:2,0:2:3.01:55,3,0	1/1:1,0:1:2.97:20,3,0	1/1:2,0:2:6.02:186,6,0	1/1:2,0:2:3.01:51,3,0	./.	./.	./.	./.	1/1:1,0:1:2.97:20,3,0	1/1:1,0:1:2.98:22,3,0	./.	1/1:1,0:1:3.01:46,3,0	./.	1/1:1,0:1:2.98:22,3,0	./.	1/1:2,0:2:2.97:20,3,0	./.	./.	./.	./.	./.
chr10	19441403	.	TCCAC	T	2533.68	PASS	AB=1.000;AC=25;AF=0.521;AN=48;BaseQRankSum=3.235;DP=287;FS=0.774;HRun=0;HaplotypeScore=56.7367;InbreedingCoeff=0.6968;MQ=48.96;MQ0=26;MQRankSum=-2.442;QD=17.00;ReadPosRankSum=4.080;VQSLOD=3.1318;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:10,0:10:19.80:20,0,56	0/0:2,0:2:2.99:0,3,24	0/0:30,0:7:14.78:0,15,204	0/0:29,0:8:8.16:0,8,136	./.	1/1:12,1:12:4.41:292,4,0	1/1:16,4:19:29.91:474,30,0	0/0:15,0:12:33.10:0,33,646	0/0:7,0:7:12.10:0,12,277	1/1:11,1:10:23.80:300,24,0	1/1:3,0:3:6.02:103,6,0	1/1:10,19:27:32.88:376,33,0	1/1:7,1:6:11.93:141,12,0	1/1:18,0:17:21.93:375,22,0	0/0:3,0:3:5.98:0,6,78	1/1:5,0:4:9.03:122,9,0	1/1:11,1:11:13.78:170,14,0	1/1:5,1:4:5.78:64,6,0	0/0:12,0:8:21.06:0,21,471	0/0:9,0:9:14.70:0,15,319	0/0:18,0:18:29.71:0,30,609	1/1:6,0:5:12.04:175,12,0	./.	1/1:6,0:6:6.02:99,6,0	./.	./.	0/0:2,0:2:2.92:0,3,17	0/0:3,0:3:0.33:0,0,1
chr10	19441459	.	T	TC	1264.81	PASS	AB=0.820;AC=18;AF=0.321;AN=56;BaseQRankSum=10.180;DP=493;FS=1.546;HRun=1;HaplotypeScore=103.8410;InbreedingCoeff=-0.3672;MQ=44.34;MQ0=26;MQRankSum=-8.822;QD=3.71;ReadPosRankSum=-2.003;VQSLOD=-0.4162;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:14,1:15:8.63:9,0,428	0/1:5,1:6:26.67:27,0,101	0/0:28,0:2:5.93:0,6,51	0/1:25,0:1:0:0,0,0	0/0:13,3:14:11.88:0,12,98	0/1:0,15:24:23.55:284,0,24	0/1:20,10:27:1.45:91,0,1	0/0:15,0:13:36.12:0,36,463	0/0:18,0:19:32.65:0,33,358	0/1:1,8:15:46.36:222,0,46	0/0:0,1:8:2.68:0,3,11	0/1:28,15:42:99:249,0,548	0/1:0,9:19:59.21:59,0,67	0/1:13,14:24:99:225,0,194	0/0:15,0:15:19.08:0,19,451	0/1:2,5:22:46.28:61,0,46	0/1:3,3:14:65.01:65,0,73	0/1:2,1:13:21.83:22,0,36	0/1:19,0:17:27.22:27,0,457	0/0:15,0:14:42.14:0,42,545	0/0:21,0:20:18.10:0,18,461	0/1:10,5:12:11.27:11,0,174	0/0:10,3:12:21.06:0,21,273	0/1:6,3:9:26.41:26,0,175	0/1:10,1:9:0.57:1,0,103	0/1:11,1:12:5.04:5,0,391	0/1:6,1:7:29.41:29,0,141	0/0:2,0:1:3.01:0,3,39
chr10	19441464	.	CATCT	C	1331.32	PASS	AB=0.923;AC=17;AF=0.340;AN=50;BaseQRankSum=5.546;DP=494;FS=10.062;HRun=0;HaplotypeScore=120.8919;InbreedingCoeff=0.7803;MQ=44.58;MQ0=22;MQRankSum=0.989;QD=8.37;ReadPosRankSum=-2.482;VQSLOD=1.6988;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:15:38.16:0,38,842	0/0:7,0:7:15.04:0,15,234	./.	./.	0/0:16,0:14:9.03:0,9,157	1/1:25,0:24:14.90:138,15,0	./.	0/0:20,0:18:8.84:0,9,57	1/1:8,13:21:14.88:215,15,0	1/1:17,0:15:24.06:259,24,0	1/1:8,0:8:2.65:30,3,0	0/0:45,0:43:54.18:0,54,1143	1/1:24,0:19:27.06:279,27,0	0/0:27,0:24:21.02:0,21,408	0/0:15,0:15:39.10:0,39,585	1/1:22,0:21:21.04:210,21,0	1/1:15,0:14:18.04:186,18,0	1/1:15,0:13:18.04:183,18,0	0/0:19,0:18:11.87:0,12,83	0/0:15,0:14:27.09:0,27,615	0/0:19,0:18:5.99:0,6,48	0/0:14,0:11:15.05:0,15,349	0/0:13,0:12:21.07:0,21,488	0/0:11,0:10:18.03:0,18,329	0/0:11,0:9:9.03:0,9,210	0/1:11,1:12:18.96:19,0,501	0/0:8,0:8:15.04:0,15,305	0/0:2,0:1:3.01:0,3,58
chr10	19441960	.	ATC	A	4660.72	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=13.206;DP=573;FS=2.588;HRun=0;HaplotypeScore=161.3295;InbreedingCoeff=0.8759;MQ=63.97;MQ0=3;MQRankSum=-9.405;QD=12.23;ReadPosRankSum=4.134;VQSLOD=4.9547;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:17,8:25:3.06:221,3,0	1/1:3,1:4:12.04:141,12,0	0/0:46,0:28:13.22:0,13,520	0/0:37,0:20:11.91:0,12,305	1/1:19,1:20:32.96:342,33,0	1/1:22,0:22:39.36:184,39,0	1/1:24,0:24:17.95:122,18,0	0/0:38,1:39:21.75:0,22,794	0/0:22,1:23:29.55:0,30,974	1/1:17,0:17:38.02:174,38,0	1/1:21,0:21:13.25:74,13,0	1/1:23,0:22:26.96:175,27,0	1/1:12,0:12:4.60:71,5,0	1/1:21,0:21:38.94:186,39,0	1/1:1,25:27:14.51:684,15,0	1/1:17,0:17:24.56:139,25,0	1/1:10,0:10:18.84:83,19,0	1/1:17,0:17:34.35:150,34,0	0/0:12,0:12:24.07:0,24,346	0/0:24,0:24:57.08:0,57,866	0/0:10,0:10:24.08:0,24,385	1/1:21,0:21:40.62:178,41,0	1/1:17,0:17:24.21:112,24,0	1/1:14,0:14:0.59:62,1,0	1/1:12,0:12:18.04:196,18,0	1/1:19,0:19:41.29:410,41,0	1/1:23,0:23:56.91:602,57,0	1/1:15,0:15:30.09:355,30,0
chr10	19441974	.	CT	C	1137.37	PASS	AB=0.662;AC=15;AF=0.268;AN=56;BaseQRankSum=11.833;DP=615;FS=0.822;HRun=1;HaplotypeScore=182.8942;InbreedingCoeff=-0.0622;MQ=58.36;MQ0=7;MQRankSum=-9.758;QD=4.39;ReadPosRankSum=7.564;VQSLOD=0.1423;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:35.65:0,36,309	0/0:6,0:6:11.26:0,11,82	0/0:47,0:24:55.55:0,56,812	0/0:47,0:21:36.17:0,36,548	0/0:21,0:21:20.82:0,21,79	1/1:13,11:24:11.70:174,12,0	0/1:20,11:31:99:107,0,155	0/0:29,0:29:85:0,85,1220	0/0:26,0:26:76.12:0,76,1158	0/1:7,11:18:96.26:122,0,96	0/1:11,9:20:36.68:37,0,44	0/1:14,12:25:58.31:149,0,58	0/1:5,7:12:34.32:67,0,34	0/1:12,12:24:84.95:138,0,85	0/0:32,0:32:36.14:0,36,282	1/1:4,13:17:2.92:134,3,0	0/1:7,5:12:18.44:54,0,18	0/1:11,9:20:68.49:101,0,68	0/0:14,0:14:42.13:0,42,599	0/0:27,0:27:67.39:0,67,1041	0/0:13,0:13:36.11:0,36,521	0/1:8,12:20:81.41:101,0,81	0/1:8,13:21:65.01:65,0,83	0/1:5,9:14:32.72:50,0,33	0/0:10,0:10:10.36:0,10,37	0/0:19,0:19:38.68:0,39,220	0/0:25,0:25:46.97:0,47,266	0/0:13,0:13:19.66:0,20,102
chr10	19441976	.	CTCCCT	C	6856.98	PASS	AB=0.674;AC=36;AF=0.643;AN=56;BaseQRankSum=13.010;DP=614;FS=6.100;HRun=0;HaplotypeScore=204.4955;InbreedingCoeff=0.6568;MQ=59.04;MQ0=7;MQRankSum=-11.961;QD=18.24;ReadPosRankSum=9.030;VQSLOD=3.0360;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:18,0:26:22.15:188,0,22	1/1:3,0:6:5.93:92,6,0	0/0:48,0:25:66.39:0,66,1007	0/0:48,0:22:42.29:0,42,702	1/1:10,0:21:29.90:249,30,0	1/1:11,11:22:35.70:538,36,0	1/1:20,11:31:16.58:493,17,0	0/0:28,0:28:84.27:0,84,2006	0/0:27,0:27:81.28:0,81,2391	1/1:7,11:18:27.22:499,27,0	1/1:11,9:20:15.98:292,16,0	1/1:14,12:25:21.78:528,22,0	0/1:5,7:12:9.38:262,0,9	1/1:11,12:23:30.64:554,31,0	0/0:32,0:32:78.23:0,78,1116	1/1:4,13:17:26.95:492,27,0	1/1:7,5:12:10.91:211,11,0	0/1:11,9:20:7.80:383,0,8	0/0:13,0:13:39.13:0,39,914	0/0:28,0:28:73.12:0,73,2035	0/0:13,0:13:39.13:0,39,1033	1/1:8,12:20:3.06:437,3,0	1/1:8,13:21:28.93:368,29,0	0/1:5,9:14:4.65:243,0,5	1/1:7,0:10:5.36:92,5,0	1/1:10,0:20:29.33:333,29,0	1/1:8,0:24:27.65:430,28,0	1/1:7,0:13:11.61:173,12,0
chr10	19441978	.	CCCT	C	4831.34	PASS	AB=0.923;AC=34;AF=0.607;AN=56;BaseQRankSum=12.852;DP=609;FS=1.602;HRun=0;HaplotypeScore=188.2691;InbreedingCoeff=0.5387;MQ=57.92;MQ0=7;MQRankSum=-13.488;QD=13.20;ReadPosRankSum=10.582;VQSLOD=3.6613;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:19,8:27:15.44:183,0,15	1/1:3,3:6:8.38:101,8,0	0/0:49,0:26:53.47:0,53,701	0/0:52,0:22:42.34:0,42,543	1/1:10,11:21:29.72:262,30,0	1/1:22,0:22:18.53:334,19,0	1/1:28,0:28:14.57:298,15,0	0/0:26,0:26:78.25:0,78,1479	0/0:28,0:28:84.27:0,84,1814	1/1:18,0:18:17.25:315,17,0	0/1:19,0:19:0.80:139,0,1	1/1:24,0:23:25.20:347,25,0	1/1:10,0:10:14.56:187,15,0	1/1:23,0:23:3.58:350,4,0	0/0:33,0:33:81.22:0,81,1164	1/1:16,0:16:34.53:328,35,0	0/1:12,0:12:3.81:119,0,4	0/1:19,0:19:24:231,0,24	0/0:13,0:13:39.05:0,39,727	0/0:28,0:28:70.12:0,70,1551	0/0:14,0:14:42.14:0,42,866	0/1:20,0:20:34.97:242,0,35	1/1:22,0:22:8.37:196,8,0	1/1:12,0:12:4.24:152,4,0	0/1:7,3:10:6.56:65,0,7	1/1:10,10:20:33.30:356,33,0	1/1:8,16:24:31.21:453,31,0	1/1:7,6:13:5.96:175,6,0
chr10	19441979	.	CCT	C	8640.76	PASS	AB=1.000;AC=42;AF=0.750;AN=56;BaseQRankSum=12.500;DP=613;FS=14.714;HRun=0;HaplotypeScore=166.6958;InbreedingCoeff=0.8153;MQ=58.59;MQ0=7;MQRankSum=-10.838;QD=18.38;ReadPosRankSum=0.452;VQSLOD=4.4004;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:27:29.18:526,29,0	1/1:7,0:7:21.03:226,21,0	0/1:46,0:26:8.84:9,0,209	0/1:54,0:22:4.59:5,0,123	1/1:13,8:21:44:397,44,0	1/1:17,5:22:56.64:543,57,0	1/1:22,5:27:60.07:572,60,0	0/0:27,0:27:57.08:0,57,866	0/0:28,0:28:75.15:0,75,1186	1/1:15,3:18:47.87:531,48,0	1/1:15,3:18:31.71:271,32,0	1/1:21,3:23:50.81:560,51,0	1/1:7,3:10:30:312,30,0	1/1:16,6:22:57.88:605,58,0	0/0:33,0:33:66.23:0,66,589	1/1:13,3:16:47.39:479,47,0	1/1:8,4:12:24.07:271,24,0	1/1:15,3:18:38.74:428,39,0	0/0:13,0:13:6.64:0,7,430	0/0:27,0:27:69.17:0,69,1024	0/0:15,0:15:39.08:0,39,567	1/1:21,0:21:43.28:439,43,0	1/1:19,3:22:47.47:448,47,0	1/1:11,1:12:24.79:232,25,0	1/1:6,4:10:11.95:110,12,0	1/1:14,6:20:59.48:627,59,0	1/1:24,0:24:66.18:763,66,0	1/1:16,0:16:10.08:287,10,0
chr10	19442034	.	AACAG	A	9015.54	PASS	AB=0.944;AC=27;AF=0.482;AN=56;BaseQRankSum=11.328;DP=554;FS=4.846;HRun=0;HaplotypeScore=139.2307;InbreedingCoeff=0.9582;MQ=62.11;MQ0=0;MQRankSum=-8.073;QD=34.28;ReadPosRankSum=3.258;VQSLOD=5.0001;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:93.32:0,93,2344	0/0:10,0:10:24.08:0,24,608	0/0:18,0:17:36.12:0,36,852	0/0:21,0:18:31.42:0,31,821	0/0:17,0:17:33.11:0,33,797	1/1:1,19:20:51.17:872,51,0	1/1:8,16:24:51.11:810,51,0	0/0:37,0:37:93.28:0,93,2068	0/0:20,0:20:45.15:0,45,1142	1/1:4,13:17:42.12:700,42,0	1/1:4,8:12:24.08:392,24,0	1/1:6,14:20:39.06:630,39,0	1/1:5,13:18:39.13:677,39,0	1/1:7,23:30:75.15:1228,75,0	0/0:29,0:29:66.20:0,66,1585	1/1:5,18:23:57.19:975,57,0	1/1:2,17:19:42.14:715,42,0	1/1:4,11:15:24.08:417,24,0	0/0:12,0:12:30.10:0,30,704	0/0:24,0:24:60.17:0,60,1572	0/0:20,0:20:57.20:0,57,1402	1/1:6,10:16:30.10:506,30,0	1/1:6,15:21:42.14:728,42,0	1/1:3,8:11:21.07:365,21,0	0/0:15,0:15:39.13:0,39,965	0/1:16,1:17:0.91:1,0,1120	0/0:23,0:23:57.20:0,57,1344	0/0:11,0:11:21.07:0,21,533
chr10	19450313	.	A	AG	5561.24	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-7.054;DP=656;FS=2.532;HRun=3;HaplotypeScore=68.3936;InbreedingCoeff=0.9980;MQ=89.02;MQ0=0;MQRankSum=-4.150;QD=35.20;ReadPosRankSum=1.864;VQSLOD=5.6208;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,31:31:90.30:1260,90,0	1/1:1,9:10:24.08:336,24,0	0/0:24,0:24:69.19:0,69,802	0/0:25,0:25:66.16:0,66,765	1/1:1,17:18:48.16:672,48,0	0/0:21,0:21:57.16:0,57,669	0/0:36,0:36:96.27:0,96,1138	0/0:23,0:23:60.18:0,60,720	0/0:36,0:36:99:0,102,1187	0/0:15,0:15:45.14:0,45,540	0/0:13,0:13:29.12:0,29,330	0/0:30,0:30:72.20:0,72,848	0/0:32,0:32:90.22:0,90,1031	0/0:28,0:28:81.23:0,81,959	1/1:4,26:30:81.26:1118,81,0	0/0:26,0:25:75.22:0,75,886	0/0:28,0:28:78.24:0,78,934	0/0:30,0:30:87.22:0,87,1025	0/0:18,0:17:42.13:0,42,504	0/0:18,0:18:45.13:0,45,537	0/0:39,0:39:99:0,108,1294	0/0:12,0:12:36.09:0,36,415	0/0:20,0:20:54.16:0,54,647	0/0:24,0:24:66.20:0,66,792	1/1:3,14:17:30.10:420,30,0	1/1:5,28:33:51.22:1083,51,0	1/1:0,13:13:30.10:420,30,0	1/1:0,6:6:18.06:252,18,0
chr10	19450985	.	A	AACAGACAG	6437.14	PASS	AB=0.611;AC=33;AF=0.611;AN=54;BaseQRankSum=-2.149;DP=749;FS=6.939;HRun=0;HaplotypeScore=195.4686;InbreedingCoeff=0.7759;MQ=59.42;MQ0=10;MQRankSum=-6.328;QD=14.60;ReadPosRankSum=-4.315;VQSLOD=2.0529;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:57.15:0,57,1229	0/0:6,0:6:9.03:0,9,221	0/0:36,0:19:17.72:0,18,250	0/0:37,0:23:6.02:0,6,95	0/0:33,0:33:63.20:0,63,1426	1/1:15,10:27:12.04:403,12,0	1/1:22,8:31:3.01:123,3,0	1/1:27,0:27:39.11:720,39,0	0/0:20,0:20:33.09:0,33,746	1/1:22,18:41:51.10:1416,51,0	1/1:12,11:24:9.02:316,9,0	1/1:11,8:21:9.03:368,9,0	1/1:13,11:26:15.03:491,15,0	1/1:3,9:13:9.01:269,9,0	1/1:7,0:21:26.91:215,27,0	1/1:5,8:15:3.01:123,3,0	1/1:14,9:25:15.03:464,15,0	0/1:8,9:22:62.43:279,0,62	1/1:15,0:16:14.93:217,15,0	1/1:24,0:49:9.03:307,9,0	1/1:23,0:24:15.51:265,16,0	./.	1/1:12,18:31:9.01:217,9,0	1/1:10,11:25:6.02:245,6,0	0/0:22,0:21:34.57:0,35,770	0/0:47,0:47:93.29:0,93,1992	0/0:22,0:22:39.13:0,39,976	0/0:17,0:17:42.13:0,42,957
chr10	19451111	.	G	GGA	806.52	PASS	AB=0.908;AC=31;AF=0.646;AN=48;BaseQRankSum=-2.652;DP=530;FS=47.649;HRun=0;HaplotypeScore=115.9394;InbreedingCoeff=0.4590;MQ=53.09;MQ0=19;MQRankSum=0.331;QD=2.47;ReadPosRankSum=-1.373;VQSLOD=0.5335;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:27:20.28:0,20,148	0/0:7,0:7:2.04:0,2,6	0/1:55,0:19:0:0,0,0	./.	0/0:19,0:19:12.15:0,12,86	1/1:26,0:26:10.50:109,10,0	1/1:13,0:13:5.94:42,6,0	1/1:25,0:25:12.65:86,13,0	0/1:15,7:22:19.53:192,0,20	1/1:17,0:17:9.30:71,9,0	1/1:16,0:14:2.04:6,2,0	1/1:12,0:12:3.01:42,3,0	1/1:17,0:17:5.37:33,5,0	0/0:9,0:8:2.22:0,2,7	0/1:13,0:19:8.45:8,0,20	1/1:14,0:14:2.47:20,2,0	1/1:13,0:13:17.50:131,17,0	1/1:9,0:10:3.86:23,4,0	1/1:16,0:15:3:29,3,0	./.	1/1:16,0:16:5.96:44,6,0	1/1:17,0:17:6.01:68,6,0	./.	1/1:17,0:15:7.55:56,8,0	0/0:14,0:15:8.86:0,9,78	0/0:16,0:22:13.49:0,13,65	0/0:15,0:17:6.15:0,6,29	./.
chr10	19452733	.	TCA	T	1187.42	PASS	AB=1.000;AC=27;AF=0.519;AN=52;BaseQRankSum=8.225;DP=474;FS=2.953;HRun=0;HaplotypeScore=75.8716;InbreedingCoeff=0.1335;MQ=67.25;MQ0=6;MQRankSum=-0.309;QD=3.83;ReadPosRankSum=0.403;VQSLOD=2.2703;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:15.51:0,16,192	0/1:8,0:8:3.61:4,0,199	./.	./.	0/1:16,0:16:38.70:39,0,111	1/1:24,0:24:11.58:72,12,0	0/1:21,0:21:48.66:49,0,55	0/0:18,0:17:10.14:0,10,64	0/0:19,2:21:0.21:0,0,372	1/1:16,0:16:5.86:37,6,0	0/1:15,0:15:15.79:16,0,38	1/1:10,0:10:8.70:54,9,0	0/1:17,0:17:8.43:100,0,8	0/1:16,0:16:23.49:98,0,23	1/1:9,11:20:18.05:196,18,0	1/1:27,0:27:13.51:217,14,0	0/1:19,0:19:29.37:110,0,29	0/1:24,0:24:75.36:75,0,86	1/1:10,0:10:8.63:54,9,0	0/1:16,0:16:8.06:70,0,8	0/1:12,0:12:0:0,0,0	1/1:6,0:6:8.95:69,9,0	1/1:13,0:13:8.10:35,8,0	0/1:20,0:20:48.91:63,0,49	0/0:14,0:14:18.53:0,19,263	0/0:16,0:16:18.06:0,18,258	0/0:19,0:19:21.05:0,21,279	0/0:7,0:7:12.01:0,12,155
chr10	19452774	.	CACAT	C	2448.26	PASS	AB=0.958;AC=25;AF=0.446;AN=56;BaseQRankSum=6.008;DP=562;FS=0.000;HRun=0;HaplotypeScore=104.1411;InbreedingCoeff=0.3858;MQ=58.32;MQ0=13;MQRankSum=2.910;QD=7.53;ReadPosRankSum=-0.580;VQSLOD=2.4885;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:31.70:0,32,582	0/0:12,0:12:33.02:0,33,472	0/0:21,0:8:6.67:0,7,152	0/0:17,0:5:14.83:0,15,113	0/0:17,0:17:37.88:0,38,498	1/1:8,22:30:9.72:75,10,0	0/1:14,0:14:39.88:165,0,40	1/1:21,0:20:1.07:337,1,0	0/0:28,0:27:69:0,69,1098	1/1:26,0:24:51.59:413,52,0	0/0:18,0:17:2.38:0,2,44	1/1:12,1:13:5.67:61,6,0	0/1:14,1:15:11.96:54,0,12	0/1:18,1:19:31.54:130,0,32	0/0:21,0:21:47.53:0,48,380	1/1:37,1:38:14.44:83,14,0	0/1:20,1:21:6.75:219,0,7	0/1:21,4:24:52.55:360,0,53	1/1:5,12:17:40.26:370,40,0	0/1:22,0:21:15.76:129,0,16	0/1:11,0:11:0:0,0,0	1/1:19,0:18:3.33:8,3,0	1/1:3,12:15:8.67:168,9,0	1/1:18,1:19:5.67:59,6,0	0/0:18,0:18:1.45:0,1,707	0/0:24,1:25:59.76:0,60,906	0/0:20,0:20:56.81:0,57,839	0/0:17,0:17:21.64:0,22,464
chr10	19452776	.	CAT	C	4589.64	PASS	AB=0.730;AC=32;AF=0.571;AN=56;BaseQRankSum=5.557;DP=553;FS=0.000;HRun=0;HaplotypeScore=80.8325;InbreedingCoeff=0.6469;MQ=58.55;MQ0=11;MQRankSum=1.448;QD=12.57;ReadPosRankSum=0.718;VQSLOD=4.5337;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,1:22:9.76:0,10,343	0/0:11,0:11:33:0,33,356	0/0:21,0:8:6.67:0,7,152	0/0:17,0:5:14.83:0,15,113	0/1:14,3:17:16.04:16,0,356	1/1:26,4:30:18.02:207,18,0	1/1:11,3:14:16.16:310,16,0	1/1:23,0:22:30.41:434,30,0	0/0:26,0:25:47.11:0,47,769	1/1:1,23:23:56.87:502,57,0	0/1:2,14:15:13.09:40,0,13	1/1:2,10:12:10.26:119,10,0	0/1:2,12:14:1.20:233,0,1	1/1:2,16:18:0.91:233,1,0	0/1:24,0:24:5.99:6,0,252	1/1:2,35:37:36.06:530,36,0	1/1:19,3:22:32.66:470,33,0	1/1:23,2:24:29.49:396,29,0	1/1:16,1:17:42.79:375,43,0	1/1:13,6:19:30.25:332,30,0	0/0:1,9:10:0:0,0,0	1/1:1,18:18:9.03:136,9,0	1/1:15,0:15:8.93:73,9,0	1/1:5,14:19:12.04:180,12,0	0/0:17,0:17:28.55:0,29,557	0/0:23,2:25:62.57:0,63,695	0/0:23,0:23:57.88:0,58,635	0/0:16,0:16:21.64:0,22,395
chr10	19454000	.	GATATAT	G	1380.99	PASS	AB=0.902;AC=27;AF=0.794;AN=34;BaseQRankSum=-1.259;DP=235;FS=0.000;HRun=0;HaplotypeScore=86.7477;InbreedingCoeff=0.3066;MQ=57.63;MQ0=11;MQRankSum=-1.812;QD=9.27;ReadPosRankSum=0.650;VQSLOD=1.2813;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:8,0:8:0.89:2,1,0	1/1:2,0:4:3.01:52,3,0	./.	./.	0/0:3,0:3:2.50:0,2,9	0/1:7,5:12:0:0,0,0	0/1:7,0:7:0:0,0,0	1/1:31,0:29:14.56:93,15,0	./.	1/1:3,11:14:27.09:548,27,0	./.	1/1:2,4:6:6.02:125,6,0	1/1:3,2:5:3.01:38,3,0	1/1:3,3:7:8.96:122,9,0	0/0:6,0:6:3.01:0,3,47	1/1:5,0:6:5.95:76,6,0	1/1:6,0:10:8.90:119,9,0	1/1:4,4:7:6.02:106,6,0	0/1:13,0:13:49.61:50,0,80	./.	./.	./.	./.	./.	./.	1/1:6,0:9:7.50:102,8,0	1/1:6,0:8:5.39:48,5,0	./.
chr10	19454012	.	T	TAG	774.24	PASS	AB=1.000;AC=10;AF=0.208;AN=48;BaseQRankSum=-3.537;DP=209;FS=14.577;HRun=0;HaplotypeScore=78.8019;InbreedingCoeff=0.4241;MQ=45.84;MQ0=14;MQRankSum=-0.012;QD=12.69;ReadPosRankSum=-2.727;VQSLOD=1.8271;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,0:6:5.90:37,6,0	0/0:4,0:4:0.89:0,1,2	0/0:5,0:1:2.99:0,3,23	./.	0/0:4,0:3:2.99:0,3,24	0/0:11,0:11:5.99:0,6,50	0/0:3,0:3:5.99:0,6,50	1/1:25,0:22:64.01:513,64,0	0/0:2,0:2:5.99:0,6,50	0/0:14,0:14:34.33:0,34,213	./.	0/0:7,0:7:8.45:0,8,53	0/0:4,0:4:2.92:0,3,17	0/0:6,0:5:8.84:0,9,54	0/0:4,0:4:6.01:0,6,70	0/0:4,0:4:5.84:0,6,34	0/0:13,0:13:22.94:0,23,168	0/0:7,0:6:6.36:0,6,32	1/1:4,7:9:21:317,21,0	./.	1/1:4,1:5:3:25,3,0	0/0:1,0:1:3:0,3,25	./.	0/0:2,0:2:3:0,3,25	0/0:10,0:10:2.99:0,3,25	0/1:12,0:12:15.10:15,0,184	0/0:8,0:8:14.77:0,15,100	0/1:1,0:1:0:0,0,0
chr10	19454050	.	TAG	T	98.06	PASS	AB=0.962;AC=13;AF=0.295;AN=44;BaseQRankSum=-0.660;DP=218;FS=0.000;HRun=0;HaplotypeScore=91.1358;InbreedingCoeff=0.1190;MQ=38.85;MQ0=21;MQRankSum=3.077;QD=1.26;ReadPosRankSum=-4.090;VQSLOD=0.1827;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:5:3.99:0,4,15	0/0:6,0:6:6.02:0,6,97	./.	0/0:15,0:2:0:0,0,0	0/0:4,0:3:3.01:0,3,57	0/1:9,0:9:3.45:16,0,3	./.	0/0:47,2:41:61.81:0,62,1582	./.	0/0:13,0:13:12.38:0,12,255	1/1:6,0:6:5.49:25,5,0	0/1:7,0:7:5.35:6,0,5	0/1:6,0:6:16.30:16,0,30	0/1:6,0:5:24.57:25,0,26	0/0:3,0:3:6.02:0,6,91	0/0:2,0:2:2.96:0,3,19	0/1:10,2:11:46.74:47,0,94	0/1:6,1:6:7.35:23,0,7	0/0:12,0:10:23.98:0,24,351	1/1:12,1:10:8.22:36,8,0	1/1:4,1:4:3.01:30,3,0	./.	./.	./.	0/0:7,0:7:3.01:0,3,43	0/0:13,0:11:12.30:0,12,396	0/1:7,0:7:1.04:1,0,225	0/0:1,0:1:3.01:0,3,57
chr10	19454066	.	T	TAG	956.49	PASS	AB=0.927;AC=22;AF=0.478;AN=46;BaseQRankSum=-2.834;DP=229;FS=1.189;HRun=0;HaplotypeScore=81.4539;InbreedingCoeff=0.2989;MQ=47.07;MQ0=19;MQRankSum=1.646;QD=5.59;ReadPosRankSum=-3.395;VQSLOD=2.0265;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:6:2.92:0,3,17	0/0:5,0:5:5.85:0,6,34	0/0:7,0:1:0.47:0,0,1	0/1:21,0:5:0:1,0,0	0/0:4,0:3:2.92:0,3,17	1/1:3,4:7:11.63:130,12,0	./.	0/1:52,0:44:41.91:42,0,219	./.	0/1:12,2:14:57.60:169,0,58	1/1:4,3:7:8.62:91,9,0	1/1:4,1:5:5.95:58,6,0	1/1:5,3:8:7.99:125,8,0	0/1:7,0:6:37.49:39,0,37	0/0:3,0:2:2.50:0,2,9	./.	0/1:7,6:11:0.79:149,0,1	1/1:6,1:5:7.41:59,7,0	0/1:8,0:6:0.30:0,0,71	1/1:13,4:14:15.14:176,15,0	1/1:4,0:3:3.01:40,3,0	1/1:1,0:1:2.97:20,3,0	./.	./.	0/0:7,0:7:2.92:0,3,17	0/0:11,0:10:21.14:0,21,131	0/0:9,0:9:11.70:0,12,68	0/0:1,0:1:2.92:0,3,17
chr10	19454068	.	GAT	G	2077.77	PASS	AB=0.896;AC=34;AF=0.739;AN=46;BaseQRankSum=-4.743;DP=228;FS=2.944;HRun=0;HaplotypeScore=77.1246;InbreedingCoeff=-0.1002;MQ=47.18;MQ0=17;MQRankSum=5.504;QD=9.71;ReadPosRankSum=2.359;VQSLOD=3.3944;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,5:6:2.94:43,3,0	1/1:2,3:5:6.02:86,6,0	0/0:7,0:1:2.97:0,3,20	0/1:18,0:5:0:0,0,0	1/1:1,3:3:3.01:43,3,0	1/1:6,1:7:7.30:78,7,0	./.	0/1:41,10:44:99:389,0,125	./.	0/1:12,2:14:99:129,0,154	1/1:6,1:7:8.92:81,9,0	0/1:5,0:5:11.57:13,0,12	0/1:7,1:8:15.06:89,0,15	0/1:4,3:6:19.68:63,0,20	0/0:2,1:2:1.25:0,1,3	./.	0/1:11,2:11:18.77:114,0,19	1/1:4,2:5:9.02:114,9,0	0/1:8,0:6:19.97:20,0,96	1/1:16,1:14:23.87:239,24,0	1/1:2,2:3:3:28,3,0	1/1:1,0:1:3.01:31,3,0	./.	./.	1/1:2,5:7:3.01:43,3,0	1/1:2,9:10:27.09:386,27,0	1/1:2,7:9:12.04:172,12,0	1/1:1,1:1:3.01:43,3,0
chr10	19454070	.	T	TAG	1645.47	PASS	AB=0.958;AC=25;AF=0.543;AN=46;BaseQRankSum=-1.957;DP=225;FS=11.359;HRun=0;HaplotypeScore=74.6859;InbreedingCoeff=0.0971;MQ=47.89;MQ0=17;MQRankSum=2.206;QD=8.94;ReadPosRankSum=0.488;VQSLOD=2.3576;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:6:1.82:0,2,5	0/0:4,0:4:4.07:0,4,12	0/0:6,0:1:2.98:0,3,21	0/1:22,0:5:0:1,0,0	0/0:4,0:3:2.04:0,2,6	1/1:3,4:7:11.87:144,12,0	./.	0/1:51,0:44:99:348,0,118	./.	0/1:12,2:14:99:141,0,104	1/1:3,3:6:9:108,9,0	0/1:4,1:5:11.52:37,0,12	1/1:5,3:8:10.55:141,11,0	0/1:7,0:6:19.83:47,0,20	1/1:1,0:2:2.96:19,3,0	./.	1/1:7,6:12:1.54:206,2,0	1/1:7,1:6:8.53:71,9,0	0/1:8,0:6:39.91:40,0,86	1/1:13,4:14:27.03:352,27,0	1/1:4,0:3:3.01:43,3,0	1/1:1,0:1:3.01:56,3,0	./.	./.	0/0:6,0:6:2.04:0,2,6	0/1:10,0:9:24.04:28,0,24	0/0:8,0:8:8.15:0,8,25	0/0:2,0:1:2.04:0,2,6
chr10	19454497	.	T	TGG	1422.70	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=7.785;DP=589;FS=2.168;HRun=8;HaplotypeScore=94.6555;InbreedingCoeff=0.9211;MQ=87.33;MQ0=0;MQRankSum=-4.458;QD=8.08;ReadPosRankSum=-4.492;VQSLOD=-0.6684;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:14,2:25:16.27:153,16,0	1/1:3,0:7:5.97:49,6,0	0/0:31,0:30:53.88:0,54,559	0/0:19,0:20:32.81:0,33,314	1/1:4,0:7:6.01:65,6,0	0/0:31,0:31:78.17:0,78,860	0/0:31,0:31:84.17:0,84,916	1/1:13,0:26:22.33:127,22,0	0/0:33,0:33:78.18:0,78,867	0/0:21,0:21:51.12:0,51,569	0/0:11,0:11:30.07:0,30,334	0/0:32,0:32:84.19:0,84,927	0/0:36,0:36:96.25:0,96,1070	0/0:20,0:20:51.12:0,51,569	1/1:5,21:26:39.13:618,39,0	0/0:36,0:36:99:0,105,1171	0/0:36,0:36:99:0,99,1104	0/0:17,0:17:45.12:0,45,502	1/1:2,0:7:10.23:38,10,0	1/1:1,0:10:19.96:69,20,0	1/1:5,0:22:37.43:129,37,0	0/0:22,0:22:63.16:0,63,702	0/0:9,0:9:24.06:0,24,268	0/0:27,0:27:69.18:0,69,769	1/1:5,0:5:3.01:46,3,0	1/1:10,0:14:11.99:114,12,0	1/1:14,2:22:15.02:146,15,0	1/1:2,0:5:9.01:86,9,0
chr10	19455044	.	TAAA	T	12134.25	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-4.737;DP=570;FS=5.456;HRun=13;HaplotypeScore=105.9638;InbreedingCoeff=0.9576;MQ=73.88;MQ0=1;MQRankSum=-2.933;QD=25.02;ReadPosRankSum=4.078;VQSLOD=4.0947;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,19:24:33.52:596,34,0	1/1:0,6:6:18.06:219,18,0	0/0:26,0:22:35.94:0,36,428	0/0:17,0:12:16.25:0,16,151	1/1:2,20:22:47.81:537,48,0	1/1:1,25:27:57.09:672,57,0	1/1:3,20:23:57.15:691,57,0	1/1:2,23:25:66.08:748,66,0	0/0:6,0:19:24.08:0,24,341	1/1:2,23:26:72.07:814,72,0	1/1:4,10:14:30.05:360,30,0	1/1:2,17:20:54.07:634,54,0	1/1:6,10:16:30.05:363,30,0	1/1:4,11:15:30.04:362,30,0	0/0:4,0:21:56.86:0,57,544	1/1:8,20:28:36.89:602,37,0	1/1:2,12:14:21.51:252,22,0	1/1:1,12:14:25.43:324,25,0	1/1:4,12:17:34.39:408,34,0	1/1:5,24:30:60.82:679,61,0	1/1:1,10:11:18.02:219,18,0	1/1:7,11:19:18.93:361,19,0	1/1:5,23:29:49.78:597,50,0	1/1:3,19:22:44.91:545,45,0	1/1:3,22:25:57.13:683,57,0	1/1:5,16:21:53.79:631,54,0	1/1:2,26:28:62.87:765,63,0	1/1:6,3:9:5.67:73,6,0
chr10	19455050	.	A	AC	682.65	PASS	AB=0.987;AC=11;AF=0.196;AN=56;BaseQRankSum=7.070;DP=567;FS=9.213;HRun=0;HaplotypeScore=126.1448;InbreedingCoeff=0.6459;MQ=72.63;MQ0=1;MQRankSum=-1.181;QD=4.98;ReadPosRankSum=2.301;VQSLOD=2.9208;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:24,1:25:12.48:130,0,12	1/1:6,0:6:7.41:23,7,0	0/0:27,0:21:42.54:0,43,429	0/0:18,0:11:27.23:0,27,216	0/1:23,0:23:34.94:143,0,35	0/0:28,0:28:64.14:0,64,409	0/0:23,0:23:63.45:0,63,418	0/0:31,0:31:80.98:0,81,551	0/0:15,0:15:10.32:0,10,82	0/0:25,0:25:70.64:0,71,456	0/0:11,0:11:30.84:0,31,194	0/0:20,0:20:57.44:0,57,373	0/0:15,0:15:41.51:0,42,294	0/0:14,0:14:35.57:0,36,244	0/0:21,0:21:56.86:0,57,496	0/0:31,0:31:83.20:0,83,598	0/0:17,0:17:25.41:0,25,169	0/0:14,0:14:32.25:0,32,210	0/0:17,0:17:50.14:0,50,340	0/0:26,0:26:72.40:0,72,456	0/0:12,0:12:24.56:0,25,155	0/0:20,0:20:57.72:0,58,416	0/0:26,0:26:64.26:0,64,415	0/0:19,0:19:41.85:0,42,265	0/1:24,0:24:5.86:108,0,6	1/1:20,2:22:30.36:236,30,0	1/1:28,1:29:7.92:82,8,0	1/1:8,0:8:19.65:123,20,0
chr10	19455055	.	AAAC	A	3743.57	PASS	AB=0.988;AC=33;AF=0.589;AN=56;BaseQRankSum=10.439;DP=558;FS=5.264;HRun=0;HaplotypeScore=129.7033;InbreedingCoeff=-0.1367;MQ=71.27;MQ0=1;MQRankSum=-1.819;QD=7.83;ReadPosRankSum=10.990;VQSLOD=0.9426;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:24:51.77:175,0,52	1/1:6,0:6:16.99:93,17,0	0/0:25,0:19:45.48:0,45,503	0/0:17,0:11:1.41:0,1,180	0/1:24,0:24:57.57:125,0,58	1/1:28,0:28:14.09:190,14,0	0/1:24,0:24:32.86:186,0,33	0/1:32,0:32:87.89:219,0,88	0/0:16,0:16:30.06:0,30,386	1/1:25,0:25:27.56:223,28,0	0/1:15,1:16:78.27:126,0,78	1/1:18,0:18:48.11:268,48,0	0/1:14,1:15:57.69:124,0,58	1/1:12,1:13:7.17:170,7,0	0/0:22,0:22:60.02:0,60,632	0/1:26,0:26:61.78:151,0,62	0/1:18,0:18:34.46:77,0,34	0/1:14,0:14:3.04:79,0,3	0/1:18,0:18:80.64:83,0,81	0/1:28,0:28:68.37:194,0,68	0/1:12,0:12:30.72:55,0,31	0/1:15,1:16:47.84:149,0,48	0/1:26,0:26:22.94:169,0,23	1/1:19,0:19:42.10:199,42,0	1/1:23,0:23:23.87:237,24,0	1/1:20,0:20:11.68:190,12,0	1/1:29,0:29:24.38:247,24,0	0/1:4,0:4:14.47:15,0,14
chr10	19459915	.	TCA	T	4549.82	PASS	AB=0.725;AC=39;AF=0.848;AN=46;BaseQRankSum=2.450;DP=557;FS=0.000;HRun=0;HaplotypeScore=95.5170;InbreedingCoeff=0.1257;MQ=64.00;MQ0=7;MQRankSum=0.801;QD=10.34;ReadPosRankSum=2.078;VQSLOD=4.6220;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:18,1:20:30.42:56,0,30	1/1:3,6:9:12.03:131,12,0	./.	./.	1/1:11,11:22:27.07:294,27,0	1/1:21,6:27:21.94:231,22,0	1/1:16,3:19:14.76:154,15,0	./.	0/0:12,0:19:15:0,15,145	1/1:17,8:25:18.58:381,19,0	0/1:13,9:22:6.81:230,0,7	1/1:11,8:20:23.73:224,24,0	1/1:7,10:19:29.90:299,30,0	1/1:9,6:14:15.04:163,15,0	1/1:9,13:22:27.07:294,27,0	1/1:3,10:12:24.06:260,24,0	1/1:14,11:27:47.69:444,48,0	1/1:13,6:21:3.84:171,4,0	./.	1/1:20,0:28:14.36:83,14,0	./.	1/1:12,9:21:15.04:163,15,0	1/1:16,3:26:14.15:118,14,0	1/1:14,12:27:26.74:256,27,0	0/1:9,7:16:20.51:86,0,21	0/1:7,6:14:17.24:175,0,17	0/1:9,10:20:6.01:275,0,6	1/1:3,2:5:6.02:65,6,0
chr10	19461788	.	A	AAAAACAAC	5040.25	PASS	AB=0.830;AC=36;AF=0.643;AN=56;BaseQRankSum=-1.994;DP=399;FS=0.669;HRun=0;HaplotypeScore=96.6047;InbreedingCoeff=0.0291;MQ=59.74;MQ0=5;MQRankSum=-2.592;QD=15.46;ReadPosRankSum=3.973;VQSLOD=2.7250;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:7,0:21:57.83:112,0,58	1/1:0,0:4:9.03:103,9,0	0/0:41,0:11:18.57:0,19,191	0/1:23,0:7:0.61:1,0,33	0/1:4,0:22:32.92:100,0,33	1/1:2,5:9:7.95:310,8,0	1/1:4,10:14:17.77:688,18,0	0/1:20,0:20:99:161,0,172	0/0:13,0:13:36.12:0,36,593	1/1:14,0:14:22.64:286,23,0	1/1:2,10:12:11.85:306,12,0	1/1:12,0:11:20.45:212,20,0	0/1:12,0:12:43.52:200,0,44	0/1:12,0:12:61.78:66,0,62	0/0:12,0:12:15.05:0,15,229	1/1:4,5:9:0.68:119,1,0	1/1:6,0:6:5.30:101,5,0	1/1:0,7:9:9.03:345,9,0	0/1:15,0:14:56.34:304,0,56	0/1:13,0:13:99:112,0,116	0/1:5,0:5:3.51:43,0,4	1/1:3,8:13:23.83:432,24,0	1/1:10,1:11:32.76:462,33,0	1/1:4,10:14:8.45:61,8,0	0/1:4,0:8:42.94:43,0,50	0/1:5,0:26:35.39:447,0,35	0/1:6,0:19:26.03:26,0,58	0/0:7,0:7:5.04:0,5,40
chr10	19462062	.	A	ATTGT	19812.38	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=2.019;DP=398;FS=0.533;HRun=0;HaplotypeScore=88.4791;InbreedingCoeff=0.9620;MQ=97.63;MQ0=0;MQRankSum=-10.354;QD=59.86;ReadPosRankSum=4.297;VQSLOD=6.4024;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,26:27:66.14:1695,66,0	1/1:1,4:7:18.06:470,18,0	0/0:29,0:29:78.25:0,78,1411	0/0:19,0:19:57.16:0,57,1006	1/1:3,21:23:60.07:1429,60,0	1/1:0,6:7:15.05:401,15,0	1/1:1,7:8:23.82:570,24,0	1/1:6,9:15:36.12:950,36,0	0/0:19,0:19:57.20:0,57,1094	1/1:1,24:26:69.22:1745,69,0	1/1:1,9:10:24.04:582,24,0	1/1:2,11:14:27.09:710,27,0	1/1:0,7:8:15.05:399,15,0	1/1:2,12:14:39.13:1014,39,0	1/1:3,9:15:18.06:478,18,0	1/1:4,6:10:24.08:632,24,0	1/1:3,17:20:42.14:1118,42,0	1/1:0,9:9:18.06:479,18,0	1/1:2,4:9:27.02:414,27,0	1/1:2,7:10:21.07:558,21,0	1/1:0,11:11:30.10:801,30,0	1/1:1,9:10:27.09:722,27,0	1/1:2,7:10:18.06:481,18,0	1/1:1,17:19:39.13:1029,39,0	1/1:1,13:14:33.11:871,33,0	1/1:3,15:19:48.15:1141,48,0	1/1:1,10:10:30.10:801,30,0	1/1:0,4:4:12.04:321,12,0
chr10	19463043	.	AT	A	4787.07	PASS	AB=0.946;AC=39;AF=0.696;AN=56;BaseQRankSum=-14.272;DP=591;FS=34.434;HRun=5;HaplotypeScore=133.3357;InbreedingCoeff=0.0460;MQ=76.87;MQ0=0;MQRankSum=-2.018;QD=9.00;ReadPosRankSum=-4.090;VQSLOD=0.0012;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,24:31:55.14:638,55,0	1/1:2,13:19:38.18:349,38,0	0/0:26,0:22:25.18:0,25,529	0/0:18,0:16:8.25:0,8,139	1/1:1,22:26:68.15:651,68,0	0/1:17,2:19:15.71:88,0,16	1/1:13,1:14:3.34:84,3,0	1/1:28,0:28:7.66:125,8,0	0/0:14,0:14:31.77:0,32,456	1/1:16,0:17:6.35:49,6,0	1/1:29,2:31:1.62:172,2,0	0/1:19,2:21:14.96:60,0,15	0/1:21,1:22:5.49:105,0,5	0/1:19,1:20:18.28:45,0,18	1/1:0,1:19:32.23:122,32,0	1/1:17,1:18:5.56:75,6,0	0/1:25,1:26:11.63:122,0,12	1/1:16,0:16:8.15:90,8,0	0/1:25,0:25:11.83:79,0,12	0/1:29,2:31:21.82:101,0,22	0/1:16,2:18:8.96:88,0,9	0/1:21,2:23:1.28:124,0,1	0/1:20,1:21:6.52:104,0,7	0/1:12,0:12:9.75:29,0,10	1/1:1,18:19:43.94:475,44,0	1/1:9,13:24:44.71:466,45,0	1/1:2,14:19:24.97:312,25,0	1/1:1,12:13:21.06:235,21,0
chr10	19463046	.	T	TA	644.96	PASS	AB=0.975;AC=16;AF=0.286;AN=56;BaseQRankSum=-0.386;DP=611;FS=5.008;HRun=0;HaplotypeScore=158.3814;InbreedingCoeff=0.0236;MQ=78.27;MQ0=0;MQRankSum=0.288;QD=2.02;ReadPosRankSum=3.101;VQSLOD=2.4056;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:29:23.73:182,24,0	0/1:19,0:19:10:87,0,10	0/0:29,0:24:61.61:0,62,650	0/0:20,0:17:7.99:0,8,220	0/1:28,0:28:7.76:133,0,8	0/0:21,0:21:30.30:0,30,188	0/0:16,0:16:18.57:0,19,107	0/1:28,2:30:25.02:25,0,167	0/0:12,0:13:37.90:0,38,487	0/0:19,0:19:33.71:0,34,141	0/0:31,0:31:40.91:0,41,249	0/1:19,1:20:20.37:20,0,130	0/0:23,0:23:33.03:0,33,165	0/1:20,0:20:15.32:15,0,155	0/0:20,0:20:23.37:0,23,99	0/0:17,0:17:13.31:0,13,134	0/0:26,0:26:45.95:0,46,234	0/1:17,1:18:1.73:2,0,143	0/1:24,2:26:9.87:10,0,171	0/1:29,2:31:15.27:15,0,247	0/0:19,0:19:19.10:0,19,151	0/1:24,0:24:6.29:6,0,149	0/0:24,0:24:37.52:0,38,190	0/0:13,0:13:27.23:0,27,127	0/1:21,0:21:14.42:103,0,14	0/1:22,0:22:8.16:118,0,8	0/1:20,0:19:34.80:37,0,35	1/1:12,0:12:15.71:55,16,0
chr10	19463703	.	AGAAGAAGAAGAGGAGGAGGAGGAAGAGGAAAAGGAG	A	7875.66	PASS	AB=0.636;AC=45;AF=0.833;AN=54;BaseQRankSum=-1.469;DP=364;FS=0.000;HRun=0;HaplotypeScore=256.3857;InbreedingCoeff=0.7455;MQ=61.13;MQ0=5;MQRankSum=-1.832;QD=27.83;ReadPosRankSum=1.054;VQSLOD=3.2324;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:18:32.93:627,33,0	1/1:3,0:3:9.02:120,9,0	0/0:20,0:10:15.05:0,15,777	0/0:24,0:17:20.55:0,21,441	1/1:4,12:16:6.01:67,6,0	1/1:13,0:13:30.02:842,30,0	1/1:14,0:13:24.04:461,24,0	1/1:11,0:11:24.03:268,24,0	0/0:17,0:17:39.13:0,39,2683	1/1:5,11:16:47.95:804,48,0	1/1:8,7:15:17.82:145,18,0	1/1:12,0:12:21.04:278,21,0	1/1:15,0:14:32.94:599,33,0	1/1:7,0:6:3.01:160,3,0	0/0:20,0:19:39.05:0,39,1575	1/1:8,0:7:14.64:322,15,0	1/1:15,0:14:33.01:524,33,0	1/1:9,0:9:19.89:285,20,0	1/1:6,4:10:24:325,24,0	0/1:6,8:14:31.11:91,0,31	1/1:9,0:9:17.90:177,18,0	1/1:6,11:17:8.93:71,9,0	1/1:4,0:4:9.01:94,9,0	1/1:13,0:13:23.83:440,24,0	1/1:20,0:20:47.91:704,48,0	1/1:9,7:16:26.66:379,27,0	1/1:8,0:7:11.93:93,12,0	./.
chr10	19463739	.	GGAA	G	607.58	PASS	AB=0.968;AC=20;AF=0.357;AN=56;BaseQRankSum=6.535;DP=354;FS=11.549;HRun=0;HaplotypeScore=95.0727;InbreedingCoeff=-0.1062;MQ=33.66;MQ0=38;MQRankSum=-2.639;QD=3.20;ReadPosRankSum=0.042;VQSLOD=0.9418;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:1.58:0,2,100	1/1:2,2:4:6.02:101,6,0	0/0:40,0:3:9.03:0,9,198	0/0:29,0:3:6.02:0,6,137	0/1:17,1:18:0.18:1,0,0	0/1:11,0:11:46.04:103,0,46	0/1:6,0:5:0:0,0,0	1/1:5,0:4:3.99:15,4,0	0/0:16,0:16:42.09:0,42,860	0/1:17,0:17:17.51:18,0,135	0/1:15,1:14:36.95:62,0,37	0/1:10,0:10:6.10:6,0,60	1/1:7,0:5:10.19:77,10,0	0/1:8,0:8:19.73:20,0,61	0/0:20,0:20:36.60:0,37,240	0/1:7,0:6:25.61:26,0,29	0/0:14,0:11:23.53:0,24,161	0/0:7,0:6:2.56:0,3,20	0/1:11,0:5:14.66:15,0,15	0/1:13,0:13:0.73:1,0,107	0/0:7,0:7:2.94:0,3,18	0/1:15,1:16:11.34:53,0,11	0/1:6,1:7:10.47:96,0,10	0/0:8,0:8:1.29:0,1,42	0/1:17,2:19:99:106,0,103	0/1:14,1:14:57.66:58,0,85	0/0:9,0:7:14.76:0,15,94	0/0:4,0:3:2.92:0,3,17
chr10	19463748	.	AGAG	A	657.49	PASS	AB=0.959;AC=10;AF=0.179;AN=56;BaseQRankSum=6.395;DP=410;FS=7.618;HRun=0;HaplotypeScore=109.0313;InbreedingCoeff=-0.2597;MQ=32.02;MQ0=45;MQRankSum=-3.081;QD=3.91;ReadPosRankSum=2.389;VQSLOD=1.3966;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:32.97:0,33,532	0/0:4,0:4:4.19:0,4,13	0/0:39,0:6:14.90:0,15,208	0/0:33,0:2:6.02:0,6,111	0/1:21,0:21:12.97:29,0,13	0/1:14,0:14:19.05:19,0,311	0/0:5,0:4:5.96:0,6,46	0/0:7,0:6:7.27:0,7,97	0/0:16,0:16:39.13:0,39,812	0/1:23,0:20:43.41:43,0,303	0/1:21,0:19:11.53:12,0,314	0/0:12,0:11:12.04:0,12,246	0/0:8,0:6:8.92:0,9,108	0/0:8,0:8:8.08:0,8,346	0/1:6,13:19:20.76:421,0,21	0/0:9,0:9:1.86:0,2,247	0/0:11,0:9:27.09:0,27,518	0/0:10,0:9:6.02:0,6,109	0/0:15,0:7:6.49:0,6,100	0/1:16,0:15:18.81:19,0,158	0/0:7,0:7:6.02:0,6,85	0/1:20,0:19:66.47:66,0,85	0/1:11,0:11:67.39:67,0,235	0/0:10,0:10:17.37:0,17,191	0/1:17,0:15:92.60:93,0,317	0/0:22,0:19:18.25:0,18,520	0/0:13,0:9:21.04:0,21,353	0/1:6,0:4:26.55:27,0,29
chr10	19463758	.	GAGA	G	979.83	PASS	AB=0.957;AC=17;AF=0.304;AN=56;BaseQRankSum=9.240;DP=467;FS=35.469;HRun=0;HaplotypeScore=119.8225;InbreedingCoeff=-0.2689;MQ=32.39;MQ0=47;MQRankSum=-3.795;QD=3.75;ReadPosRankSum=2.093;VQSLOD=0.8675;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:33.08:0,33,647	0/1:5,0:5:9.53:31,0,10	0/0:41,0:6:18.05:0,18,295	0/0:32,0:3:9.03:0,9,172	0/1:21,2:23:51.46:51,0,60	0/1:14,0:13:73.50:73,0,393	0/0:12,0:10:11.99:0,12,141	0/0:11,0:9:14.98:0,15,168	0/0:18,0:17:45.02:0,45,893	0/1:23,2:21:75.58:76,0,319	0/1:21,1:20:43.61:44,0,412	0/0:12,0:11:14.98:0,15,299	0/0:6,0:4:4.47:0,4,83	0/1:9,0:8:12.73:13,0,388	1/1:17,0:17:15.14:255,15,0	0/1:10,0:10:28.38:28,0,352	0/0:17,0:14:21:0,21,670	0/1:11,0:10:12.97:13,0,128	0/1:16,0:8:1.11:1,0,78	0/1:17,1:17:36.92:37,0,152	0/0:9,0:8:6.02:0,6,91	0/1:19,1:20:99:128,0,126	0/1:12,2:14:99:125,0,350	0/0:13,0:12:11.28:0,11,261	0/1:19,3:20:99:197,0,406	0/1:26,0:22:23.11:23,0,690	0/0:16,1:13:24.04:0,24,470	0/1:7,1:6:43.51:44,0,70
chr10	19463784	.	GGAA	G	538.57	PASS	AB=0.985;AC=19;AF=0.339;AN=56;BaseQRankSum=5.188;DP=559;FS=26.443;HRun=0;HaplotypeScore=191.2789;InbreedingCoeff=-0.3954;MQ=42.88;MQ0=28;MQRankSum=-5.774;QD=1.57;ReadPosRankSum=-2.704;VQSLOD=0.9505;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:20.73:0,21,389	0/0:9,0:8:0.64:0,1,172	0/0:43,0:10:16.95:0,17,149	0/0:44,0:15:21.71:0,22,204	0/1:28,0:28:1.37:1,0,195	0/1:13,0:12:26.07:26,0,204	0/1:15,1:13:50.06:50,0,99	0/1:21,0:19:36.11:36,0,263	0/0:21,0:19:36.45:0,36,521	0/1:29,0:22:13.84:14,0,369	0/0:22,0:21:18.62:0,19,382	0/1:18,0:17:17.05:17,0,196	0/1:10,1:11:51.89:121,0,52	0/1:11,1:11:23.04:23,0,235	1/1:15,0:15:3.92:187,4,0	0/0:18,0:17:1.23:0,1,318	0/0:17,0:15:33.04:0,33,400	0/1:17,0:16:8.07:8,0,120	0/1:5,0:3:14.97:15,0,34	0/1:24,0:21:5.64:6,0,172	0/0:8,0:7:3.01:0,3,41	0/1:20,0:18:20.37:20,0,222	0/1:25,0:24:27.96:28,0,338	0/0:15,1:14:14.94:0,15,173	0/1:26,1:24:91.35:91,0,395	0/1:30,0:29:19.09:19,0,620	0/1:22,0:19:20.95:21,0,325	0/1:11,0:9:5.34:5,0,111
chr10	19463802	.	AGAGAAT	A	2996.34	PASS	AB=0.876;AC=19;AF=0.339;AN=56;BaseQRankSum=9.097;DP=555;FS=68.707;HRun=0;HaplotypeScore=224.7991;InbreedingCoeff=-0.5310;MQ=44.35;MQ0=14;MQRankSum=-4.794;QD=7.89;ReadPosRankSum=-1.014;VQSLOD=-0.1750;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:20:0,20,691	0/1:7,1:7:75.39:75,0,118	0/0:43,0:8:12.22:0,12,240	0/0:43,0:14:28.06:0,28,365	0/1:25,5:30:99:332,0,311	0/1:13,3:15:99:132,0,480	0/0:16,1:16:24.08:0,24,458	0/1:8,6:14:99:278,0,331	0/1:18,0:17:19.55:20,0,1191	0/1:25,5:25:99:191,0,641	0/1:21,2:22:99:172,0,517	0/0:15,3:18:26.81:0,27,343	0/0:12,1:12:29.82:0,30,426	0/1:10,3:13:39.59:40,0,417	0/1:13,0:12:35.69:36,0,67	0/1:16,3:17:99:101,0,481	0/1:13,1:13:35.27:35,0,558	0/1:17,0:17:70.09:70,0,168	0/0:3,1:4:6.02:0,6,105	0/1:18,6:22:99:252,0,291	0/0:6,0:6:3.01:0,3,38	0/1:15,5:18:99:211,0,249	0/1:22,6:27:99:357,0,418	0/0:14,1:14:8.99:0,9,255	0/1:27,4:28:99:287,0,513	0/1:25,7:31:99:403,0,974	0/1:16,4:20:99:159,0,556	0/1:10,0:9:3.95:4,0,217
chr10	19463814	.	AGAG	A	5012.91	PASS	AB=0.819;AC=34;AF=0.630;AN=54;BaseQRankSum=-4.788;DP=541;FS=7.929;HRun=0;HaplotypeScore=193.4180;InbreedingCoeff=-0.3455;MQ=41.77;MQ0=25;MQRankSum=-0.402;QD=10.60;ReadPosRankSum=2.211;VQSLOD=3.9581;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:14,2:15:9.14:219,9,0	0/1:6,2:7:54.55:73,0,55	0/1:32,0:6:17.87:18,0,41	0/0:36,0:13:3.06:0,3,56	0/1:27,6:33:93.96:94,0,136	1/1:7,9:14:27.09:352,27,0	1/1:8,10:16:12.03:151,12,0	1/1:15,0:12:11.61:74,12,0	0/0:22,0:20:19.31:0,19,777	0/1:25,4:23:23.48:478,0,23	0/1:18,3:19:7.29:227,0,7	0/1:8,10:17:14.32:155,0,14	1/1:5,10:13:1.73:379,2,0	1/1:12,2:12:17.99:220,18,0	0/1:12,3:14:80.34:99,0,80	0/1:12,4:14:7.28:283,0,7	1/1:7,7:13:12.04:165,12,0	1/1:5,12:16:1.25:97,1,0	1/1:4,1:4:3.01:44,3,0	0/1:20,2:19:51.49:143,0,51	./.	0/1:18,2:17:6.90:238,0,7	0/1:22,6:27:38.83:432,0,39	0/1:4,11:14:8.59:79,0,9	0/1:27,2:26:50.38:260,0,50	0/1:25,6:30:78.19:403,0,78	0/1:7,9:16:12.29:182,0,12	0/1:7,2:7:22.73:149,0,23
chr10	19463832	.	AGAG	A	824.35	PASS	AB=0.987;AC=32;AF=0.593;AN=54;BaseQRankSum=3.403;DP=477;FS=7.865;HRun=0;HaplotypeScore=181.8990;InbreedingCoeff=-0.1093;MQ=33.68;MQ0=34;MQRankSum=-3.998;QD=2.08;ReadPosRankSum=2.107;VQSLOD=1.9788;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:14,0:13:18.07:48,0,18	0/1:9,0:7:1.92:32,0,2	1/1:20,0:3:1.25:3,1,0	0/0:22,0:5:5.75:0,6,64	0/1:27,0:27:85.91:86,0,90	0/1:14,0:11:4.87:12,0,5	1/1:14,0:11:5.95:24,6,0	0/0:11,0:5:8.99:0,9,103	0/0:23,0:21:41.29:0,41,686	0/1:27,1:20:28.13:36,0,28	0/1:18,1:17:7.58:76,0,8	1/1:18,0:16:9.84:46,10,0	1/1:16,0:13:19:99,19,0	1/1:11,0:9:3.72:15,4,0	0/1:13,0:11:20.38:20,0,70	0/1:16,0:13:13.36:45,0,13	0/1:8,0:7:0.11:0,0,2	1/1:16,0:15:7.67:39,8,0	0/1:6,0:4:5:5,0,14	0/1:26,0:23:48.04:48,0,59	./.	1/1:15,4:16:7.93:51,8,0	0/1:25,1:25:26.89:81,0,27	1/1:13,0:12:0.69:16,1,0	0/1:25,0:21:12:83,0,12	0/1:27,2:27:89.22:89,0,131	0/0:14,0:14:4.74:0,5,44	1/1:8,0:7:3.79:21,4,0
chr10	19463850	.	AGAG	A	1757.99	PASS	AB=0.841;AC=24;AF=0.444;AN=54;BaseQRankSum=-1.753;DP=373;FS=1.861;HRun=0;HaplotypeScore=146.9216;InbreedingCoeff=-0.5258;MQ=29.03;MQ0=30;MQRankSum=0.087;QD=6.10;ReadPosRankSum=1.050;VQSLOD=3.1496;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:12,1:13:61.19:61,0,104	0/1:5,1:5:37.37:37,0,64	./.	0/0:19,0:5:8.67:0,9,166	0/1:16,6:23:12:12,0,289	0/1:7,4:8:4.88:88,0,5	0/1:6,5:8:57.10:70,0,57	0/1:10,0:5:11.96:12,0,100	0/0:21,0:18:44.77:0,45,777	0/1:17,2:12:97.79:98,0,128	0/1:11,2:13:72.45:72,0,115	0/1:9,3:12:36.31:139,0,36	0/1:9,6:12:15.45:289,0,15	0/1:7,1:7:4.67:45,0,5	0/0:10,0:8:5.52:0,6,189	0/1:11,2:10:41.08:41,0,112	0/1:5,1:5:5.64:6,0,15	0/1:6,1:6:45.65:46,0,59	1/1:2,2:2:3.01:51,3,0	0/1:15,7:22:97.22:152,0,97	0/0:9,1:5:3.01:0,3,37	0/1:12,2:11:29.21:51,0,29	0/1:13,4:16:58.90:177,0,59	0/0:8,1:8:5.99:0,6,58	0/1:17,2:18:99:102,0,112	0/1:20,3:22:99:124,0,352	0/1:10,4:14:99:121,0,139	1/1:2,2:3:8.86:115,9,0
chr10	19463859	.	G	GGAA	1911.07	PASS	AB=0.958;AC=28;AF=0.519;AN=54;BaseQRankSum=4.900;DP=332;FS=14.683;HRun=0;HaplotypeScore=132.4931;InbreedingCoeff=-0.2638;MQ=24.96;MQ0=33;MQRankSum=-1.633;QD=7.90;ReadPosRankSum=0.955;VQSLOD=2.0666;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:11:6.26:0,6,137	0/0:4,0:4:0.39:0,0,63	./.	0/0:16,0:4:8.98:0,9,121	0/1:21,1:22:27.42:141,0,27	1/1:8,1:6:13.73:104,14,0	0/0:10,1:7:0.26:0,0,96	1/1:8,0:4:5.95:42,6,0	0/0:22,0:18:28.11:0,28,535	0/1:18,1:12:36.99:212,0,37	0/1:12,0:12:62.16:77,0,62	0/1:12,1:12:42.67:64,0,43	0/1:14,1:12:21.95:119,0,22	1/1:5,1:5:0.31:50,0,0	0/1:11,0:9:56.56:57,0,83	0/1:8,0:4:17.58:54,0,18	1/1:4,0:1:2.96:19,3,0	0/1:6,0:5:8.51:9,0,49	1/1:4,0:2:2.37:8,2,0	0/1:21,0:20:38.13:38,0,94	0/0:10,0:4:3.01:0,3,39	0/1:10,1:9:39.96:98,0,40	1/1:16,1:16:13.87:210,14,0	0/1:6,0:4:10.98:11,0,45	0/1:14,1:14:93.01:157,0,93	0/1:22,1:21:89.33:392,0,89	0/1:8,2:10:28.19:186,0,28	1/1:2,0:2:4.74:16,5,0
chr10	19463868	.	GAAA	G	1448.30	PASS	AB=0.885;AC=30;AF=0.600;AN=50;BaseQRankSum=6.291;DP=264;FS=6.542;HRun=3;HaplotypeScore=103.8393;InbreedingCoeff=-0.0969;MQ=24.50;MQ0=30;MQRankSum=-1.214;QD=7.96;ReadPosRankSum=-1.603;VQSLOD=-0.7302;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:9:0.77:0,1,68	0/1:3,0:3:12.03:31,0,12	./.	0/0:16,0:4:6.02:0,6,80	1/1:12,5:17:22.01:169,22,0	1/1:7,0:4:5.99:58,6,0	0/1:8,0:5:11.36:11,0,67	./.	0/0:20,0:17:1.19:0,1,310	0/1:11,3:8:34.36:78,0,34	1/1:6,2:8:0.20:55,0,0	0/1:10,3:12:64.78:81,0,65	1/1:11,0:8:17.63:113,18,0	1/1:3,2:4:5.98:57,6,0	0/1:7,1:6:23.90:26,0,24	0/1:6,2:4:21.93:47,0,22	./.	0/1:6,0:5:11.07:45,0,11	1/1:3,0:2:2.80:13,3,0	0/1:12,1:12:20.76:49,0,21	0/0:10,0:4:2.97:0,3,20	1/1:7,1:6:8.99:86,9,0	1/1:8,3:11:23.89:225,24,0	0/0:4,1:3:3.01:0,3,37	1/1:11,2:12:17.36:161,17,0	0/1:12,4:15:57.43:186,0,57	0/1:6,2:8:22.72:71,0,23	1/1:2,0:2:5.85:34,6,0
chr10	19464398	.	AGGT	A	1750.80	PASS	AB=0.933;AC=19;AF=0.339;AN=56;BaseQRankSum=6.053;DP=563;FS=18.201;HRun=0;HaplotypeScore=229.8590;InbreedingCoeff=-0.2448;MQ=46.42;MQ0=16;MQRankSum=-5.665;QD=4.88;ReadPosRankSum=-7.144;VQSLOD=-0.4198;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:10,1:11:13.55:77,0,14	0/1:7,0:7:34.79:35,0,39	0/1:45,0:5:6.95:7,0,152	0/0:32,0:8:2.66:0,3,175	1/1:16,4:19:8.18:149,8,0	0/1:19,2:21:57.13:57,0,466	0/0:13,0:11:9.91:0,10,268	0/1:10,6:16:99:284,0,280	0/0:19,0:19:49.11:0,49,608	0/1:39,3:42:99:144,0,768	0/1:16,1:17:9.48:9,0,306	0/0:21,1:22:8.36:0,8,554	0/0:19,0:19:17.42:0,17,502	0/0:16,0:16:1.31:0,1,391	0/1:19,0:19:46.58:47,0,518	0/0:16,1:17:16.58:0,17,398	0/0:14,0:14:37.43:0,37,475	0/0:18,0:18:26.57:0,27,507	0/0:16,0:15:17.37:0,17,373	0/1:24,2:26:99:174,0,445	0/0:18,0:17:18.85:0,19,479	0/1:26,1:27:99:193,0,382	0/1:24,3:27:99:114,0,373	0/1:12,0:12:45.96:46,0,151	0/1:27,2:29:85.62:156,0,86	0/1:15,2:16:50.77:150,0,51	1/1:5,3:7:17.93:165,18,0	0/1:14,1:14:20.60:108,0,21
chr10	19466724	.	C	CT	3950.60	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-11.642;DP=681;FS=7.489;HRun=9;HaplotypeScore=61.5409;InbreedingCoeff=0.9950;MQ=73.38;MQ0=1;MQRankSum=-0.103;QD=25.99;ReadPosRankSum=2.015;VQSLOD=4.2526;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,14:17:39.11:431,39,0	0/0:10,0:10:23.99:0,24,208	0/0:19,0:19:35.96:0,36,310	0/0:9,0:9:13.81:0,14,110	1/1:7,28:35:52.10:782,52,0	0/0:25,0:25:71.98:0,72,625	0/0:20,0:20:53.97:0,54,468	0/0:41,0:42:95:0,95,813	0/0:18,0:18:50.96:0,51,439	0/0:33,0:34:89.01:0,89,761	0/0:26,0:26:68.98:0,69,599	0/0:24,0:24:53.96:0,54,469	0/0:28,0:28:80.96:0,81,698	0/0:26,0:26:65.96:0,66,569	0/0:27,0:26:62.98:0,63,547	0/0:24,0:24:65.98:0,66,573	0/0:27,0:26:77.94:0,78,670	0/0:22,0:22:62.98:0,63,547	0/0:23,0:24:53:0,53,444	0/0:24,0:24:68.99:0,69,599	0/0:25,0:25:62.98:0,63,547	0/0:29,0:29:83.98:0,84,729	0/0:23,1:24:26.79:0,27,461	0/0:22,0:21:62.95:0,63,539	1/1:4,21:25:57.15:624,57,0	1/1:0,32:32:90.22:985,90,0	1/1:4,28:32:72.19:797,72,0	1/1:0,11:11:30.08:332,30,0
chr10	19467746	.	A	AC	3447.92	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-2.088;DP=305;FS=32.785;HRun=1;HaplotypeScore=71.9078;InbreedingCoeff=0.7995;MQ=74.54;MQ0=0;MQRankSum=-3.063;QD=13.36;ReadPosRankSum=-3.231;VQSLOD=0.3755;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:22,7:29:37.96:371,38,0	1/1:5,0:5:5.94:43,6,0	0/0:11,0:11:29.82:0,30,340	0/0:9,0:8:17.96:0,18,183	1/1:5,0:5:8.96:70,9,0	1/1:9,0:9:17.94:144,18,0	1/1:22,0:22:30.38:253,30,0	1/1:5,0:5:14.86:127,15,0	0/0:8,0:8:15.02:0,15,166	1/1:5,0:5:14.96:124,15,0	1/1:9,0:9:11.75:81,12,0	1/1:17,0:17:23.10:164,23,0	1/1:11,0:11:26.59:209,27,0	1/1:13,0:13:23.86:193,24,0	0/0:19,0:18:26.82:0,27,204	1/1:8,0:8:11.97:99,12,0	1/1:18,0:18:40.98:300,41,0	1/1:8,0:8:20.73:147,21,0	1/1:1,4:5:14.92:119,15,0	1/1:3,0:3:5.97:46,6,0	1/1:20,0:20:19.36:203,19,0	1/1:9,0:9:11.68:90,12,0	1/1:9,0:9:9:77,9,0	1/1:10,0:10:8.81:60,9,0	1/1:11,3:14:19.32:170,19,0	1/1:8,0:8:9.22:97,9,0	1/1:11,2:13:24.05:219,24,0	1/1:0,3:3:3.01:44,3,0
chr10	19467752	.	GGC	G	3055.93	PASS	AB=1.000;AC=40;AF=0.741;AN=54;BaseQRankSum=-2.775;DP=346;FS=2.418;HRun=0;HaplotypeScore=66.7772;InbreedingCoeff=0.3992;MQ=76.99;MQ0=0;MQRankSum=-1.900;QD=10.25;ReadPosRankSum=-3.255;VQSLOD=2.3369;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:31,0:31:30.11:200,0,30	1/1:5,0:5:8.58:57,9,0	0/0:18,0:17:12.66:0,13,246	0/0:13,0:9:17.94:0,18,197	1/1:8,0:8:14.08:66,14,0	./.	1/1:23,3:26:53.32:427,53,0	1/1:8,0:8:20.92:165,21,0	0/0:6,0:6:17.91:0,18,228	1/1:5,0:5:12.01:110,12,0	0/1:8,0:8:0:0,0,0	1/1:18,1:19:12.43:117,12,0	1/1:15,1:16:38.66:329,39,0	1/1:7,0:7:5.94:42,6,0	1/1:20,2:21:45.37:565,45,0	1/1:13,0:13:19.45:155,19,0	1/1:22,1:23:58.25:504,58,0	1/1:13,1:14:15:161,15,0	1/1:2,1:3:9.01:97,9,0	1/1:5,0:5:5.93:40,6,0	1/1:19,1:20:0.89:2,1,0	0/1:10,0:10:0:0,0,0	1/1:2,5:7:2.96:19,3,0	1/1:1,10:11:3.01:44,3,0	0/1:10,0:10:3.16:27,0,3	0/1:11,0:11:16.90:36,0,17	0/1:16,0:16:37.32:46,0,37	0/0:2,0:2:2.04:0,2,6
chr10	19467753	.	GC	G	3834.52	PASS	AB=0.500;AC=43;AF=0.827;AN=52;BaseQRankSum=-0.147;DP=341;FS=5.852;HRun=1;HaplotypeScore=60.8712;InbreedingCoeff=0.6765;MQ=78.52;MQ0=0;MQRankSum=-2.980;QD=14.52;ReadPosRankSum=-0.481;VQSLOD=2.6855;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:30,1:31:62.66:409,63,0	1/1:5,0:5:8.98:72,9,0	0/0:17,2:18:16.17:0,16,219	0/0:12,1:10:17.68:0,18,146	1/1:7,1:8:17.74:140,18,0	./.	1/1:14,11:25:47.07:428,47,0	1/1:0,8:8:20.93:178,21,0	0/0:6,0:6:12.26:0,12,142	1/1:5,0:5:12.01:110,12,0	0/1:0,8:8:0:0,0,0	1/1:2,16:18:12.47:125,12,0	1/1:13,2:15:38.90:333,39,0	1/1:0,7:7:5.97:61,6,0	1/1:17,5:21:61.11:495,61,0	1/1:11,2:13:35.82:285,36,0	1/1:17,6:23:57.63:553,58,0	1/1:1,13:14:14.99:158,15,0	1/1:3,0:3:8.99:76,9,0	1/1:0,5:5:5.93:40,6,0	0/0:1,19:20:1.55:0,2,4	./.	1/1:5,1:6:2.96:19,3,0	1/1:10,0:10:2.99:23,3,0	1/1:10,0:10:12.85:87,13,0	1/1:10,0:10:13.62:71,14,0	1/1:16,0:16:15.99:166,16,0	1/1:2,0:2:2.22:7,2,0
chr10	19467759	.	G	GT	733.25	PASS	AB=0.836;AC=10;AF=0.185;AN=54;BaseQRankSum=-0.022;DP=350;FS=31.786;HRun=0;HaplotypeScore=78.9848;InbreedingCoeff=0.3067;MQ=75.50;MQ0=0;MQRankSum=0.506;QD=8.15;ReadPosRankSum=0.223;VQSLOD=1.4115;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:29:65.67:345,0,66	1/1:6,0:6:8.99:87,9,0	0/0:17,0:16:38.06:0,38,357	0/0:14,0:10:3.63:0,4,127	1/1:10,0:10:23.47:190,23,0	0/0:10,0:10:2.97:0,3,20	0/0:28,0:28:44.14:0,44,375	0/0:11,0:11:25.17:0,25,194	0/0:6,0:6:18.03:0,18,216	0/0:3,1:4:5.99:0,6,48	./.	0/0:19,0:19:23.63:0,24,170	0/0:12,0:12:32.34:0,32,244	0/0:8,0:8:8.96:0,9,73	0/0:27,0:26:69.20:0,69,557	0/0:14,0:14:39.63:0,40,294	0/0:19,0:19:49.47:0,49,387	0/0:14,0:14:14.66:0,15,112	0/0:4,0:4:5.98:0,6,48	0/0:7,0:7:8.92:0,9,64	0/0:17,0:17:14.48:0,14,109	0/0:9,0:9:2.68:0,3,21	0/0:5,0:5:5.55:0,6,29	0/0:10,0:10:5.73:0,6,36	0/1:12,0:12:10.75:86,0,11	0/1:6,8:14:31.62:73,0,32	0/1:10,7:17:70.71:71,0,74	1/1:2,0:2:4.80:27,5,0
chr10	19471306	.	TAC	T	1610.88	PASS	AB=0.928;AC=21;AF=0.375;AN=56;BaseQRankSum=6.645;DP=670;FS=6.634;HRun=0;HaplotypeScore=99.7229;InbreedingCoeff=0.3115;MQ=64.39;MQ0=7;MQRankSum=-0.028;QD=5.46;ReadPosRankSum=1.807;VQSLOD=2.5481;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:25,15:41:18.78:401,19,0	1/1:3,5:8:12.03:137,12,0	0/0:29,0:15:6.02:0,6,90	0/0:33,0:20:5.92:0,6,41	1/1:14,9:25:32.59:315,33,0	0/1:23,2:25:23.21:23,0,553	0/0:22,0:27:30.08:0,30,422	0/1:23,1:22:15.67:16,0,202	0/1:17,1:19:1.57:2,0,349	0/1:21,0:21:54.94:55,0,449	0/1:15,3:18:38.28:38,0,339	0/1:16,1:17:1.13:1,0,363	0/0:15,0:15:33.07:0,33,433	0/1:21,2:23:23.27:23,0,522	0/0:19,0:26:3.47:0,3,29	0/0:31,1:32:31.76:0,32,909	0/0:33,0:31:49.41:0,49,739	0/0:24,0:24:46.97:0,47,698	0/1:13,1:14:30.23:30,0,156	0/0:21,0:20:39.12:0,39,577	0/0:41,1:42:44:0,44,1032	0/0:18,0:18:36.10:0,36,529	0/0:21,0:21:33.08:0,33,482	0/0:50,4:54:17.44:0,17,1104	1/1:7,10:20:14.87:151,15,0	0/1:15,3:18:34.18:91,0,34	1/1:5,11:16:33.07:364,33,0	1/1:0,5:6:14.88:151,15,0
chr10	19471358	.	T	TACACAGAC	393.77	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.157;DP=681;FS=0.000;HRun=0;HaplotypeScore=188.1302;InbreedingCoeff=0.9604;MQ=59.98;MQ0=3;MQRankSum=-3.481;QD=12.31;ReadPosRankSum=-1.902;VQSLOD=2.4747;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:53.29:0,53,1476	0/0:8,0:8:21.04:0,21,412	0/0:32,0:22:35.76:0,36,744	0/0:35,0:24:26.16:0,26,621	0/0:19,0:19:33.06:0,33,631	0/0:32,0:31:54.05:0,54,1173	0/0:21,0:21:45.14:0,45,1076	0/0:46,0:46:78.25:0,78,1825	0/0:19,0:19:33.11:0,33,833	0/0:26,0:25:56.99:0,57,1298	0/0:16,0:16:32.46:0,32,703	0/0:30,0:29:68.94:0,69,1680	0/0:22,0:22:45.15:0,45,1139	0/0:20,0:20:42.06:0,42,849	1/1:17,15:32:12.73:480,13,0	0/0:31,0:31:78.27:0,78,1959	0/0:22,0:22:23.97:0,24,830	0/0:20,0:20:47.91:0,48,967	0/0:14,0:14:24.06:0,24,521	0/0:18,0:18:39.13:0,39,984	0/0:41,0:41:81.23:0,81,1844	0/0:14,0:14:24.07:0,24,573	0/0:20,0:20:42.14:0,42,1058	0/0:37,0:37:53.90:0,54,1245	0/0:20,0:20:36.12:0,36,940	0/0:15,0:15:45.11:0,45,1012	0/0:22,0:22:63.20:0,63,1507	0/0:14,0:14:36.07:0,36,880
chr10	19471430	.	G	GAC	4173.36	PASS	AB=0.801;AC=32;AF=0.593;AN=54;BaseQRankSum=-3.223;DP=527;FS=12.410;HRun=0;HaplotypeScore=85.7247;InbreedingCoeff=-0.1866;MQ=58.45;MQ0=4;MQRankSum=-0.268;QD=9.15;ReadPosRankSum=-3.079;VQSLOD=1.5071;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:20,0:20:25.62:26,0,27	0/1:12,0:12:13.31:13,0,59	./.	0/1:9,0:3:0:0,0,0	0/1:15,0:15:38.58:39,0,64	1/1:7,23:29:39.13:604,39,0	0/1:6,6:12:6.60:41,0,7	1/1:20,17:40:25.95:429,26,0	0/0:8,0:9:26.89:0,27,279	0/1:15,18:33:19.69:599,0,20	0/1:5,8:14:22.42:127,0,22	0/1:10,13:23:48.45:168,0,48	1/1:6,9:15:14.64:196,15,0	0/1:10,7:17:38.89:165,0,39	1/1:13,0:22:2.87:19,3,0	0/1:10,20:30:47.40:206,0,47	0/1:7,16:22:9.15:302,0,9	1/1:7,10:17:16.13:194,16,0	1/1:8,6:13:21.03:290,21,0	0/1:10,12:22:59.95:336,0,60	1/1:10,5:14:6.02:93,6,0	0/1:9,0:9:7.65:67,0,8	1/1:7,13:20:12.04:186,12,0	0/1:11,8:19:16.65:40,0,17	0/0:20,0:20:8.07:0,8,217	0/0:23,0:23:23.82:0,24,239	0/1:14,0:14:9.75:10,0,78	0/1:11,0:11:22.70:23,0,30
chr10	19474488	.	GTGAATGAATGAATGAATGAA	G	6248.41	PASS	AB=0.831;AC=34;AF=0.739;AN=46;BaseQRankSum=3.009;DP=428;FS=11.947;HRun=0;HaplotypeScore=194.9475;InbreedingCoeff=0.3755;MQ=54.10;MQ0=7;MQRankSum=-2.506;QD=21.85;ReadPosRankSum=1.214;VQSLOD=2.7433;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:17:6.01:145,6,0	1/1:5,0:4:3:28,3,0	0/0:20,0:11:3.01:0,3,106	0/1:18,0:6:0:0,0,0	1/1:13,4:17:5.98:179,6,0	1/1:15,8:23:15.05:784,15,0	1/1:15,0:14:6.01:103,6,0	0/0:34,0:33:3.69:0,4,202	0/0:12,0:19:30.10:0,30,1023	1/1:8,5:11:9.02:278,9,0	./.	1/1:9,8:17:9.03:478,9,0	1/1:6,10:16:18.06:956,18,0	1/1:8,8:16:9.03:478,9,0	1/1:15,0:25:21.07:416,21,0	1/1:7,4:11:9.03:478,9,0	0/1:10,8:18:2.88:185,0,3	1/1:9,0:9:3.01:116,3,0	0/1:9,0:10:99:104,0,134	0/1:8,0:11:47.51:48,0,65	0/0:12,0:12:12.04:0,12,184	./.	./.	./.	1/1:6,5:11:3.01:147,3,0	1/1:6,4:9:12.01:369,12,0	1/1:11,12:20:18.06:956,18,0	./.
chr10	19475858	.	CCGCG	C	3690.29	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=11.662;DP=564;FS=7.055;HRun=0;HaplotypeScore=96.9111;InbreedingCoeff=0.8745;MQ=62.64;MQ0=1;MQRankSum=-1.540;QD=26.74;ReadPosRankSum=4.252;VQSLOD=3.1117;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,21:26:36.12:636,36,0	1/1:2,7:9:12.04:212,12,0	0/0:14,0:9:2.37:0,2,8	0/1:8,0:6:22.87:23,0,23	1/1:4,18:21:33.11:565,33,0	0/0:23,0:23:66.14:0,66,1461	0/0:22,0:22:63.20:0,63,1379	0/0:18,0:18:45.15:0,45,974	0/0:22,0:22:54.16:0,54,1192	0/0:24,0:24:68.87:0,69,1451	0/0:14,0:14:30.09:0,30,637	0/0:29,0:30:84.07:0,84,1972	0/0:16,0:16:45.15:0,45,1035	0/0:23,0:23:54.18:0,54,1223	0/0:16,0:16:33.11:0,33,818	0/0:17,0:17:48.15:0,48,1161	0/0:27,0:27:69.21:0,69,1507	0/0:24,0:25:59.99:0,60,1412	0/0:21,0:21:39.12:0,39,864	0/0:12,0:12:36.12:0,36,916	0/0:36,0:36:93.26:0,93,1991	0/0:15,0:16:47.94:0,48,998	0/0:15,0:16:41.92:0,42,931	0/0:34,0:33:90.29:0,90,2048	1/1:6,20:24:36.12:636,36,0	1/1:4,17:20:51.14:833,51,0	1/1:2,15:17:30.06:497,30,0	1/1:3,6:9:18.06:289,18,0
chr10	19475866	.	GCGCGCA	G	303.14	PASS	AB=0.972;AC=13;AF=0.232;AN=56;BaseQRankSum=13.260;DP=546;FS=12.110;HRun=0;HaplotypeScore=126.4544;InbreedingCoeff=0.6218;MQ=59.61;MQ0=1;MQRankSum=2.020;QD=2.44;ReadPosRankSum=6.208;VQSLOD=1.1679;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:22:14.95:34,15,0	1/1:7,0:7:4.98:12,5,0	0/0:10,0:5:9.02:0,9,109	0/1:8,0:5:23.64:24,0,51	1/1:18,1:18:15.47:101,15,0	0/0:25,0:25:75.13:0,75,2073	0/0:23,0:23:69.22:0,69,2038	0/0:25,0:25:69.22:0,69,1843	0/0:20,0:20:57.15:0,57,1688	0/0:24,0:24:71.88:0,72,2177	0/0:14,0:14:36.11:0,36,1042	0/0:31,0:31:90.16:0,90,2833	0/0:16,0:16:48.15:0,48,1441	0/0:20,0:20:57.19:0,57,1740	0/0:16,0:16:42.11:0,42,1261	0/0:18,0:18:51.16:0,51,1702	0/0:25,0:25:72.20:0,72,2088	0/0:24,0:24:69.24:0,69,2117	0/0:16,0:16:48.14:0,48,1329	0/0:15,0:15:45.13:0,45,1391	0/0:35,0:35:99:0,102,2783	0/0:18,0:18:54.16:0,54,1467	0/0:17,0:17:51.15:0,51,1487	0/0:30,0:29:90.29:0,90,2833	1/1:21,0:19:14.95:34,15,0	1/1:19,2:20:3.47:182,3,0	0/1:15,0:15:8.92:9,0,34	0/1:10,1:11:53.45:74,0,53
chr10	19476886	.	G	GA	542.84	PASS	AB=0.892;AC=4;AF=0.071;AN=56;BaseQRankSum=-3.158;DP=589;FS=1.539;HRun=9;HaplotypeScore=65.3936;InbreedingCoeff=0.4394;MQ=81.17;MQ0=3;MQRankSum=0.309;QD=8.48;ReadPosRankSum=-0.399;VQSLOD=1.5731;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:20,3:23:6.41:6,0,404	0/0:4,0:4:12:0,12,104	0/0:36,0:26:12.48:0,12,130	0/0:36,0:28:5.02:0,5,171	0/0:17,0:18:44.98:0,45,390	0/0:30,0:30:89.95:0,90,774	0/0:12,0:13:32.01:0,32,262	0/0:30,0:30:68.97:0,69,599	0/0:16,0:16:44.97:0,45,386	0/0:29,0:29:65.96:0,66,573	0/0:16,0:17:20.74:0,21,329	0/0:14,0:14:32.99:0,33,286	0/0:17,0:17:38.98:0,39,339	0/0:23,0:23:59.97:0,60,521	1/1:2,21:23:57.15:630,57,0	0/0:23,0:23:56.98:0,57,495	0/0:20,0:20:50.99:0,51,443	0/0:23,0:23:53.99:0,54,468	0/0:28,0:28:74.95:0,75,644	0/0:24,0:24:59.92:0,60,513	0/0:17,0:17:41.99:0,42,365	0/0:13,0:13:26.98:0,27,234	0/0:17,0:17:23.53:0,24,353	0/1:16,2:18:15.37:15,0,340	0/0:19,0:19:53.99:0,54,469	0/0:19,0:19:47.99:0,48,417	0/0:30,0:29:83.97:0,84,728	0/0:9,0:9:23.99:0,24,208
chr10	19480945	.	CCA	C	16868.14	PASS	AB=0.947;AC=54;AF=0.964;AN=56;BaseQRankSum=-0.938;DP=436;FS=10.738;HRun=0;HaplotypeScore=185.9484;InbreedingCoeff=-0.0367;MQ=74.15;MQ0=0;MQRankSum=-3.414;QD=38.69;ReadPosRankSum=2.892;VQSLOD=5.0099;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:29:80.91:1092,81,0	1/1:5,0:5:15.05:229,15,0	0/1:16,0:15:11.55:414,0,12	0/1:15,2:17:15.88:492,0,16	1/1:22,0:22:60.14:889,60,0	1/1:23,0:23:57.19:858,57,0	1/1:18,0:17:45.03:605,45,0	1/1:29,0:29:87.13:1208,87,0	1/1:12,0:12:36.12:544,36,0	1/1:17,0:17:51.17:766,51,0	1/1:14,0:14:36.12:553,36,0	1/1:14,0:13:36.51:526,37,0	1/1:13,0:13:36.51:525,37,0	1/1:14,0:14:33.11:486,33,0	1/1:13,0:13:36.04:517,36,0	1/1:12,0:12:35.95:495,36,0	1/1:6,0:6:18.06:271,18,0	1/1:11,0:11:30.01:411,30,0	1/1:13,0:12:28.54:393,29,0	1/1:25,0:25:75.18:1097,75,0	1/1:12,0:12:30.01:397,30,0	1/1:17,0:17:48.07:699,48,0	1/1:16,0:16:45.07:669,45,0	1/1:9,0:9:17.73:256,18,0	1/1:17,0:17:45.08:659,45,0	1/1:17,0:17:48.16:712,48,0	1/1:16,2:16:51.17:787,51,0	1/1:7,0:7:21.07:316,21,0
chr10	19481761	.	CT	C	2851.84	PASS	AB=0.915;AC=21;AF=0.375;AN=56;BaseQRankSum=10.844;DP=698;FS=1.976;HRun=12;HaplotypeScore=79.4130;InbreedingCoeff=0.4666;MQ=71.14;MQ0=0;MQRankSum=-0.255;QD=7.99;ReadPosRankSum=2.680;VQSLOD=2.9134;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,27:35:77.78:575,78,0	1/1:3,10:13:29.87:232,30,0	0/1:14,0:11:3.85:4,0,85	0/1:18,0:16:10.33:10,0,35	1/1:10,24:36:66.03:498,66,0	0/1:17,4:22:36:36,0,379	0/0:24,2:26:7.57:0,8,427	0/0:31,2:33:33.84:0,34,511	0/1:11,2:14:16.83:17,0,180	0/0:29,1:32:50.26:0,50,655	0/0:18,3:21:25.57:0,26,415	0/0:31,1:32:54.82:0,55,714	0/0:20,0:22:32.50:0,33,505	0/0:21,2:23:4.28:0,4,380	0/1:26,3:29:6.58:7,0,480	0/0:21,1:22:33.88:0,34,525	0/1:32,4:36:11.81:12,0,612	0/0:15,0:15:33.05:0,33,328	0/0:14,1:15:3.75:0,4,197	0/1:24,3:28:4.34:4,0,522	0/0:17,1:20:24.41:0,24,429	0/0:35,1:36:33.85:0,34,513	0/0:18,2:20:6.62:0,7,219	0/0:22,1:24:36.03:0,36,568	1/1:7,27:34:47.22:549,47,0	1/1:10,21:32:31.22:408,31,0	1/1:5,24:29:61.69:485,62,0	1/1:5,12:17:26.86:209,27,0
chr10	19482135	.	AT	A	323.08	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.213;DP=767;FS=6.375;HRun=12;HaplotypeScore=80.8820;InbreedingCoeff=0.9494;MQ=73.97;MQ0=1;MQRankSum=-0.074;QD=16.15;ReadPosRankSum=1.108;VQSLOD=4.6769;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:42,1:44:96.81:0,97,1131	0/0:10,0:10:24.03:0,24,232	0/0:28,2:21:13.12:0,13,224	0/0:23,0:16:21.20:0,21,156	0/0:30,0:30:78.11:0,78,772	0/0:30,0:30:75.15:0,75,760	0/0:25,1:26:32.11:0,32,497	0/0:37,0:37:69.14:0,69,700	0/0:25,0:27:77.58:0,78,724	0/0:31,2:33:31.72:0,32,668	0/0:21,2:23:16.65:0,17,532	0/0:27,1:28:48.26:0,48,650	0/0:25,0:27:71.79:0,72,686	0/0:26,1:27:51.79:0,52,682	1/1:1,19:20:53.79:418,54,0	0/0:21,0:21:63.13:0,63,639	0/0:32,0:32:81.13:0,81,801	0/0:20,0:19:39.06:0,39,388	0/0:26,2:28:16.65:0,17,532	0/0:29,2:31:37.73:0,38,735	0/0:21,0:21:36.05:0,36,354	0/0:23,0:23:42.08:0,42,426	0/0:22,0:22:51.10:0,51,518	0/0:22,2:24:36.77:0,37,533	0/0:33,1:34:60.93:0,61,789	0/0:38,1:40:57.72:0,58,726	0/0:30,1:31:60.82:0,61,762	0/0:24,0:24:54.70:0,55,650
chr10	19483289	.	ATCTAGGAACGGGC	A	12843.26	PASS	AB=0.571;AC=13;AF=0.232;AN=56;BaseQRankSum=15.830;DP=680;FS=0.000;HRun=0;HaplotypeScore=268.8084;InbreedingCoeff=0.8933;MQ=75.43;MQ0=0;MQRankSum=-15.344;QD=85.05;ReadPosRankSum=0.445;VQSLOD=3.5826;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,37:44:89.80:3496,90,0	1/1:0,10:10:27.09:1052,27,0	0/0:20,0:20:60.19:0,60,2500	0/0:17,0:17:45.15:0,45,1639	1/1:3,26:29:57.13:2086,57,0	0/0:25,0:25:72.25:0,72,4124	0/0:25,0:25:69.24:0,69,4153	0/0:24,0:24:66.23:0,66,3741	0/0:23,0:23:66.23:0,66,3814	0/0:26,0:26:78.27:0,78,4445	0/0:18,0:18:45.13:0,45,2410	0/0:31,0:31:93.31:0,93,5557	0/0:24,0:24:69.22:0,69,4278	0/0:30,0:30:84.29:0,84,5239	0/0:34,0:34:99:0,99,5975	0/0:23,0:23:69.22:0,69,4021	0/0:32,0:32:96.29:0,96,5567	0/0:27,0:27:81.28:0,81,5030	0/0:18,0:18:54.19:0,54,3303	0/0:17,0:17:51.18:0,51,3139	0/0:36,0:36:99:0,108,6519	0/0:26,0:26:75.24:0,75,4320	0/0:12,0:12:33.11:0,33,1959	0/0:41,0:41:99:0,120,7555	1/1:4,18:22:48.16:1801,48,0	0/1:4,12:16:99:1190,0,159	1/1:0,24:24:69.09:2739,69,0	1/1:0,6:6:12.04:479,12,0
chr10	19484791	.	C	CCCA	9925.59	PASS	AB=0.667;AC=55;AF=0.982;AN=56;BaseQRankSum=1.497;DP=281;FS=8.109;HRun=0;HaplotypeScore=84.7427;InbreedingCoeff=-0.0235;MQ=74.28;MQ0=0;MQRankSum=-1.669;QD=35.32;ReadPosRankSum=1.372;VQSLOD=5.4520;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,17:19:48.04:665,48,0	1/1:0,5:5:15.05:257,15,0	1/1:5,0:12:31.99:382,32,0	0/1:4,0:8:7.55:216,0,8	1/1:0,12:12:2.90:16,3,0	1/1:1,8:9:24.08:414,24,0	1/1:5,6:11:21.07:374,21,0	1/1:1,6:7:21.07:301,21,0	1/1:3,10:13:30.10:541,30,0	1/1:3,11:14:42.14:666,42,0	1/1:2,2:4:2.97:20,3,0	1/1:2,15:17:51.09:811,51,0	1/1:3,14:18:45.15:744,45,0	1/1:0,11:11:33.11:561,33,0	1/1:3,10:13:30.10:514,30,0	1/1:2,9:11:30.06:487,30,0	1/1:2,6:8:21.07:372,21,0	1/1:1,4:5:9.03:147,9,0	1/1:0,9:9:24.08:316,24,0	1/1:1,6:7:8.99:114,9,0	1/1:2,3:5:6.46:74,6,0	1/1:3,8:11:16.72:189,17,0	1/1:2,6:8:12.74:108,13,0	1/1:1,7:8:9.03:146,9,0	1/1:0,12:12:27.08:438,27,0	1/1:2,7:9:27.05:348,27,0	1/1:2,10:12:36.11:529,36,0	1/1:1,2:3:9.03:176,9,0
chr10	19484792	.	C	CCACATTGCTCGAAA	17507.91	PASS	AB=0.778;AC=55;AF=0.982;AN=56;BaseQRankSum=0.883;DP=253;FS=22.942;HRun=0;HaplotypeScore=309.0985;InbreedingCoeff=-0.0429;MQ=66.86;MQ0=0;MQRankSum=-2.772;QD=69.20;ReadPosRankSum=1.512;VQSLOD=2.9881;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:17:17.51:434,18,0	1/1:5,0:5:12.04:658,12,0	1/1:4,1:7:3.05:750,3,0	0/1:5,0:7:37.75:450,0,38	1/1:12,0:12:5.95:17,6,0	1/1:8,0:8:8.99:202,9,0	1/1:8,0:8:18.06:696,18,0	1/1:6,0:6:18.06:587,18,0	1/1:11,0:11:16.30:733,16,0	1/1:13,0:13:22.63:836,23,0	1/1:4,0:4:2.97:20,3,0	1/1:17,0:17:44.97:1767,45,0	1/1:15,0:15:36.12:1945,36,0	1/1:11,0:11:24.55:890,25,0	1/1:10,0:10:21.54:970,22,0	1/1:10,0:10:19.57:677,20,0	1/1:7,0:7:18.06:898,18,0	1/1:5,0:5:12.04:631,12,0	1/1:9,0:9:18.06:724,18,0	1/1:7,0:7:6.02:171,6,0	1/1:5,0:5:7.55:78,8,0	1/1:10,0:10:8.99:203,9,0	1/1:6,0:6:8.99:197,9,0	1/1:7,0:7:15.05:712,15,0	1/1:12,0:12:18.06:626,18,0	1/1:9,0:9:21.94:652,22,0	1/1:12,0:12:21.94:896,22,0	1/1:3,0:3:6.84:89,7,0
chr10	19486825	.	GTGTATC	G	650.04	PASS	AB=0.988;AC=26;AF=0.481;AN=54;BaseQRankSum=-2.224;DP=516;FS=0.000;HRun=0;HaplotypeScore=242.3258;InbreedingCoeff=0.0808;MQ=28.26;MQ0=6;MQRankSum=-2.269;QD=1.57;ReadPosRankSum=0.213;VQSLOD=2.1553;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:4:0.47:1,0,0	1/1:15,0:15:4.97:26,5,0	0/0:18,0:5:15.05:0,15,415	0/0:20,0:3:9.03:0,9,257	0/1:33,0:33:0.93:1,0,2	0/0:13,0:13:2.08:0,2,7	0/0:14,0:14:3.02:0,3,18	0/1:23,0:20:99:149,0,223	0/0:9,0:8:6:0,6,212	0/1:32,0:32:99:118,0,429	0/1:22,1:23:0.46:1,0,0	1/1:17,2:19:16.10:115,16,0	0/1:12,1:13:10.13:54,0,10	1/1:12,0:12:8.98:89,9,0	0/1:25,0:24:20.20:22,0,20	0/1:18,0:18:10.26:10,0,30	1/1:3,0:4:6.12:88,6,0	./.	0/1:7,0:7:48.48:48,0,63	0/1:48,0:47:1.74:2,0,107	0/1:5,0:5:3.30:11,0,3	1/1:29,0:28:1.10:4,1,0	0/1:36,1:37:0.70:1,0,2	0/0:2,0:2:0:0,0,0	1/1:37,0:36:4.10:20,4,0	0/1:31,0:30:33.90:34,0,730	0/0:22,0:19:8.53:0,9,199	0/0:3,0:3:8.95:0,9,76
chr10	19486827	.	GTATC	G	1117.93	PASS	AB=0.898;AC=25;AF=0.463;AN=54;BaseQRankSum=-3.674;DP=529;FS=9.799;HRun=0;HaplotypeScore=238.3007;InbreedingCoeff=0.0001;MQ=28.18;MQ0=7;MQRankSum=0.914;QD=2.67;ReadPosRankSum=-0.159;VQSLOD=1.2928;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:4,0:4:0:0,0,0	1/1:15,0:15:4.10:19,4,0	0/0:21,0:5:15.05:0,15,346	0/0:21,0:3:9.03:0,9,207	0/1:34,0:34:0.48:0,0,1	0/0:8,5:13:2.41:0,2,13	0/0:14,2:16:2.29:0,2,15	0/1:19,0:20:99:256,0,223	0/0:10,0:9:6:0,6,168	0/1:29,6:35:99:409,0,543	0/1:22,1:23:0.40:0,0,1	0/1:13,6:19:20.97:48,0,21	1/1:3,10:13:11.15:143,11,0	1/1:4,8:12:2.58:58,3,0	0/0:25,0:24:2.60:0,3,33	0/1:13,5:18:29.90:30,0,62	0/1:3,1:4:13.04:33,0,13	./.	0/1:6,0:7:56.19:80,0,56	0/1:44,1:48:5.25:5,0,116	1/1:5,0:6:5.95:57,6,0	1/1:25,4:28:0.89:3,1,0	0/1:32,5:37:0.48:0,0,2	0/0:1,0:2:0:0,0,0	1/1:36,0:36:4.97:19,5,0	0/1:31,0:30:8.62:9,0,651	0/1:22,0:19:36:86,0,36	0/0:3,0:3:8.36:0,8,67
chr10	19486831	.	CTGTG	C	1167.90	PASS	AB=0.861;AC=19;AF=0.352;AN=54;BaseQRankSum=-1.987;DP=556;FS=1.362;HRun=0;HaplotypeScore=249.1385;InbreedingCoeff=0.0155;MQ=28.33;MQ0=9;MQRankSum=-1.570;QD=3.57;ReadPosRankSum=1.486;VQSLOD=2.5246;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:1,2:5:2.96:19,3,0	1/1:12,1:15:1.73:11,2,0	0/0:21,0:6:14.79:0,15,279	0/0:25,0:3:7.27:0,7,146	0/1:24,9:34:0.48:0,0,1	0/0:15,0:16:2.41:0,2,13	0/0:15,0:16:2.29:0,2,15	0/0:26,0:22:9.04:0,9,96	0/0:10,0:9:6:0,6,146	0/1:34,0:37:99:160,0,484	0/1:24,0:25:0.40:0,0,1	0/1:17,0:19:4.23:65,0,4	0/1:15,0:15:28.60:29,0,91	0/1:11,0:12:23.89:61,0,24	0/1:15,0:25:18.94:19,0,26	0/0:19,0:20:1.61:0,2,47	1/1:4,0:4:5.71:23,6,0	./.	0/1:6,0:7:18.64:19,0,33	0/0:48,0:50:12.06:0,12,166	0/0:6,0:6:3.86:0,4,26	0/0:27,0:29:0.48:0,0,46	0/1:33,0:37:0.48:0,0,2	0/0:2,0:2:0:0,0,0	1/1:32,5:38:7.53:39,8,0	0/1:17,8:29:99:425,0,349	0/1:6,14:19:12.54:435,0,13	0/0:3,0:3:8.36:0,8,67
chr10	19486835	.	G	GTC	393.75	PASS	AB=0.965;AC=20;AF=0.370;AN=54;BaseQRankSum=4.906;DP=578;FS=3.265;HRun=0;HaplotypeScore=266.7275;InbreedingCoeff=0.1796;MQ=28.56;MQ0=12;MQRankSum=0.039;QD=1.06;ReadPosRankSum=-0.977;VQSLOD=2.2596;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,0:7:5.93:42,6,0	0/0:15,1:16:2.10:0,2,17	0/0:25,0:6:18.02:0,18,232	0/0:31,0:4:11.22:0,11,120	0/1:31,2:33:0.06:1,0,0	1/1:17,0:17:1.74:6,2,0	0/0:17,0:17:0.99:0,1,28	0/0:27,0:23:27.50:0,28,307	0/0:11,0:9:6.02:0,6,92	0/1:39,0:38:47.86:48,0,317	0/1:25,1:26:0.07:1,0,0	0/1:19,0:19:2.48:2,0,32	0/1:15,0:15:1.81:2,0,90	0/0:12,0:12:10.04:0,10,49	1/1:26,0:25:2.54:28,3,0	0/1:20,0:20:8.98:9,0,10	0/0:4,0:4:5.76:0,6,40	./.	0/0:7,0:7:17.43:0,17,95	0/1:41,9:49:30.19:197,0,30	0/0:6,0:6:5.87:0,6,35	0/0:27,3:29:2.29:0,2,24	0/1:35,3:38:0.35:1,0,0	0/1:2,0:2:0:0,0,0	1/1:33,8:40:2.40:20,2,0	0/1:31,1:31:99:149,0,337	0/0:22,0:19:30.98:0,31,179	1/1:5,0:5:0.79:19,1,0
chr10	19486849	.	G	GTCTA	632.45	PASS	AB=0.992;AC=12;AF=0.222;AN=54;BaseQRankSum=6.436;DP=639;FS=18.130;HRun=0;HaplotypeScore=288.1172;InbreedingCoeff=-0.0310;MQ=30.92;MQ0=13;MQRankSum=-2.040;QD=2.76;ReadPosRankSum=3.724;VQSLOD=0.9517;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:9:6.96:0,7,86	0/0:17,0:17:3.33:0,3,21	0/0:35,0:10:24.04:0,24,373	0/0:44,0:7:18.03:0,18,304	0/0:30,4:34:1.36:0,1,48	0/0:17,0:17:1.15:0,1,5	0/0:20,0:20:17.13:0,17,238	0/0:37,0:32:42.75:0,43,940	0/0:13,0:11:5.90:0,6,120	0/1:40,1:40:99:344,0,757	0/1:24,0:24:0.83:1,0,1	0/1:18,0:18:31.53:32,0,56	0/0:18,0:18:22.47:0,22,253	0/1:12,0:12:5.13:5,0,43	0/1:27,0:26:13.37:52,0,13	0/1:22,0:22:36.79:37,0,37	1/1:6,0:6:0.48:13,0,0	./.	0/0:10,0:10:19.33:0,19,276	0/0:49,1:49:2.74:0,3,197	0/0:7,0:7:5.81:0,6,92	0/0:32,1:32:5.37:0,5,99	0/1:37,1:38:0.49:0,0,1	0/1:2,0:2:0.11:0,0,0	0/0:39,2:40:3.14:0,3,38	0/1:33,1:33:99:263,0,556	0/0:23,0:21:19.68:0,20,338	0/1:5,0:5:5.19:5,0,94
chr10	19486851	.	G	GTATC	1829.88	PASS	AB=0.880;AC=14;AF=0.259;AN=54;BaseQRankSum=3.622;DP=638;FS=28.672;HRun=0;HaplotypeScore=282.6991;InbreedingCoeff=-0.2134;MQ=31.29;MQ0=13;MQRankSum=-3.653;QD=6.14;ReadPosRankSum=4.011;VQSLOD=1.4162;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:8.99:0,9,92	0/0:14,3:17:5.72:0,6,34	0/0:36,0:10:24.05:0,24,401	0/0:46,0:9:18.03:0,18,306	0/0:30,3:33:1.36:0,1,48	0/0:12,5:17:1.15:0,1,5	0/0:18,2:20:17.06:0,17,218	0/1:37,0:32:0.75:1,0,889	0/0:11,2:11:5.90:0,6,120	0/1:33,7:39:99:685,0,629	0/1:22,2:24:0.83:1,0,1	0/1:14,5:19:44.23:169,0,44	0/0:18,0:18:21.18:0,21,232	0/1:9,3:12:41.35:75,0,41	0/1:18,9:26:13.20:116,0,13	0/1:14,8:22:26.84:115,0,27	0/1:4,2:6:13.95:48,0,14	./.	0/1:10,0:10:32.52:33,0,201	0/0:45,5:49:23.15:0,23,216	0/0:7,0:7:5.81:0,6,91	0/0:28,5:32:5.37:0,5,99	0/1:34,3:37:0.49:0,0,1	0/1:2,0:2:0.11:0,0,0	0/0:36,4:39:3.14:0,3,37	0/1:28,5:32:99:632,0,465	0/1:22,2:21:43.25:43,0,288	0/1:5,0:5:42.98:43,0,117
chr10	19486867	.	C	CTATGTATTTG	4077.34	PASS	AB=0.946;AC=25;AF=0.446;AN=56;BaseQRankSum=7.489;DP=641;FS=58.622;HRun=0;HaplotypeScore=374.7849;InbreedingCoeff=-0.3268;MQ=36.61;MQ0=9;MQRankSum=-7.365;QD=8.30;ReadPosRankSum=-6.027;VQSLOD=-0.7344;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:14:8.10:0,8,216	1/1:12,1:13:10.24:117,10,0	0/0:39,0:19:39.05:0,39,1275	0/0:43,0:13:39.13:0,39,1154	0/1:28,3:31:1.57:2,0,95	0/1:20,2:22:18.38:18,0,92	0/0:26,0:26:21.60:0,22,667	0/1:34,0:29:99:106,0,1952	0/0:18,0:16:17.13:0,17,417	0/1:35,2:37:99:1295,0,685	1/1:16,4:20:5.34:13,5,0	0/1:19,0:19:87.30:87,0,138	0/1:16,1:18:84.64:85,0,628	0/1:16,0:16:21.94:22,0,172	0/1:25,0:24:83.14:83,0,90	0/1:22,0:22:99:243,0,108	0/1:10,0:9:43.03:43,0,186	0/0:1,0:1:3.01:0,3,59	0/1:11,0:11:99:165,0,293	0/1:35,6:41:96.54:97,0,358	0/0:8,0:8:4.67:0,5,200	0/1:35,1:35:51.04:51,0,186	1/1:25,4:30:5.19:25,5,0	1/1:2,0:2:1.36:3,1,0	0/1:33,5:39:49.25:49,0,81	0/1:29,2:31:99:1293,0,924	0/1:26,0:24:99:160,0,910	0/1:4,1:5:99:121,0,278
chr10	19488650	.	CT	C	3803.39	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=16.006;DP=679;FS=5.104;HRun=1;HaplotypeScore=91.1556;InbreedingCoeff=0.9937;MQ=67.87;MQ0=0;MQRankSum=-1.838;QD=26.78;ReadPosRankSum=2.049;VQSLOD=3.5480;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,34:36:99:1109,102,0	1/1:1,12:13:24.58:285,25,0	0/0:24,0:23:66.11:0,66,930	0/0:17,0:17:42.13:0,42,608	1/1:0,16:16:26.99:275,27,0	0/0:20,0:20:60.19:0,60,917	0/0:28,0:28:84.26:0,84,1269	0/0:33,0:33:93.30:0,93,1412	0/0:25,0:25:75.24:0,75,1151	0/0:28,0:28:84.29:0,84,1314	0/0:17,0:17:51.16:0,51,773	0/0:26,0:26:78.25:0,78,1199	0/0:29,0:29:84.26:0,84,1270	0/0:27,0:27:81.28:0,81,1267	0/0:31,0:31:93.30:0,93,1431	0/0:37,0:37:99:0,111,1715	0/0:37,0:36:99:0,108,1657	0/0:25,0:24:72.24:0,72,1117	0/0:18,0:18:54.04:0,54,781	0/0:23,0:23:66.21:0,66,1009	0/0:20,0:20:60.16:0,60,891	0/0:20,0:20:60.20:0,60,936	0/0:17,0:17:48.15:0,48,726	0/0:35,0:35:99:0,105,1570	1/1:1,18:19:53.07:591,53,0	1/1:5,23:28:28.23:757,28,0	1/1:2,24:26:58.05:647,58,0	1/1:0,4:4:12.04:139,12,0
chr10	19489266	.	GA	G	713.32	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=6.794;DP=624;FS=0.715;HRun=6;HaplotypeScore=58.3049;InbreedingCoeff=0.6667;MQ=65.30;MQ0=1;MQRankSum=0.909;QD=13.72;ReadPosRankSum=1.588;VQSLOD=2.6604;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,105,1381	0/0:12,0:12:30.08:0,30,378	0/1:25,0:22:9:9,0,364	0/0:12,0:9:24.08:0,24,310	0/0:28,0:28:84.25:0,84,1074	0/0:18,0:18:54.17:0,54,698	0/0:16,0:16:45.11:0,45,572	0/0:30,0:30:84.25:0,84,1078	0/0:16,0:16:48.16:0,48,630	0/0:22,0:22:63.20:0,63,813	0/0:26,0:26:75.22:0,75,957	0/0:22,0:22:63.20:0,63,825	0/0:21,0:21:60.18:0,60,772	0/0:22,0:22:63.15:0,63,795	1/1:0,27:27:75.19:806,75,0	0/0:33,0:33:93.29:0,93,1208	0/0:26,0:26:66.19:0,66,845	0/0:22,0:22:66.20:0,66,840	0/0:21,0:21:57.18:0,57,737	0/0:24,0:24:69.22:0,69,906	0/0:14,0:14:39.13:0,39,513	0/0:24,0:24:69.21:0,69,892	0/0:21,0:21:60.18:0,60,773	0/0:15,0:15:42.12:0,42,534	0/0:27,0:27:75.24:0,75,986	0/0:22,0:22:63.20:0,63,828	0/0:37,0:37:99:0,102,1296	0/0:5,0:5:15.05:0,15,197
chr10	19490012	.	CAG	C	643.29	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-3.310;DP=694;FS=15.199;HRun=0;HaplotypeScore=193.2050;InbreedingCoeff=0.9980;MQ=65.57;MQ0=3;MQRankSum=-2.996;QD=33.86;ReadPosRankSum=-1.150;VQSLOD=3.3789;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:90.27:0,90,1612	0/0:11,0:11:30.10:0,30,560	0/0:24,0:20:25.86:0,26,563	0/0:30,0:25:52.03:0,52,846	0/0:40,0:40:99:0,114,1937	0/0:17,0:17:45.14:0,45,803	0/0:22,0:22:54.19:0,54,1002	0/0:25,0:23:66.23:0,66,1211	1/1:1,18:19:51.17:738,51,0	0/0:29,0:29:81.27:0,81,1478	0/0:18,0:18:51.16:0,51,919	0/0:23,0:23:66.20:0,66,1173	0/0:25,0:25:66.18:0,66,1177	0/0:18,0:18:48.16:0,48,896	0/0:30,0:30:78.27:0,78,1456	0/0:33,0:33:96.33:0,96,1786	0/0:23,0:23:66.19:0,66,1198	0/0:15,0:15:45.15:0,45,841	0/0:19,0:19:51.12:0,51,847	0/0:24,0:24:54.19:0,54,1009	0/0:15,0:15:42.14:0,42,769	0/0:26,0:26:69.24:0,69,1281	0/0:26,0:26:75.26:0,75,1400	0/0:40,0:40:99:0,114,2089	0/0:16,0:16:42.14:0,42,770	0/0:30,0:30:84.28:0,84,1502	0/0:37,0:37:99:0,102,1823	0/0:21,0:21:63.15:0,63,1088
chr10	19490032	.	AG	A	7988.65	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=1.850;DP=661;FS=4.584;HRun=10;HaplotypeScore=181.4839;InbreedingCoeff=0.9974;MQ=65.71;MQ0=5;MQRankSum=-5.606;QD=20.48;ReadPosRankSum=3.880;VQSLOD=3.3999;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:73.89:0,74,491	0/0:13,0:13:34.24:0,34,234	0/0:31,0:23:27.45:0,27,304	0/0:29,0:21:17.06:0,17,219	0/0:34,0:34:74.84:0,75,501	1/1:4,14:18:44.94:385,45,0	1/1:4,17:21:38.22:404,38,0	1/1:9,20:29:56.77:494,57,0	0/0:24,1:25:25.88:0,26,471	1/1:5,21:26:59.94:520,60,0	1/1:1,15:16:41.99:364,42,0	1/1:3,20:23:59.95:521,60,0	1/1:2,17:19:53.97:465,54,0	1/1:2,19:21:56.94:495,57,0	1/1:6,24:30:71.94:624,72,0	1/1:5,27:32:74.91:651,75,0	1/1:3,19:22:56.97:494,57,0	1/1:2,12:14:35.97:312,36,0	1/1:5,7:12:20.91:182,21,0	1/1:0,18:18:50.99:442,51,0	1/1:3,10:13:29.94:260,30,0	1/1:7,16:23:41.94:364,42,0	1/1:2,21:23:55.25:491,55,0	1/1:6,23:29:59.87:521,60,0	0/0:21,0:21:55.97:0,56,361	0/0:30,1:31:58.93:0,59,509	0/0:35,0:35:88.97:0,89,617	0/0:17,0:17:35.59:0,36,242
chr10	19490175	.	G	GC	12003.12	PASS	AC=48;AF=0.960;AN=50;BaseQRankSum=-0.526;DP=402;FS=3.729;HRun=3;HaplotypeScore=286.1521;InbreedingCoeff=0.5891;MQ=31.22;MQ0=0;MQRankSum=-1.853;QD=30.46;ReadPosRankSum=2.275;VQSLOD=3.3058;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,13:16:36.08:481,36,0	1/1:3,18:21:60.12:785,60,0	./.	0/0:1,0:1:2.04:0,2,6	1/1:8,14:22:18.06:251,18,0	1/1:1,7:8:18.06:251,18,0	1/1:1,9:10:15.05:210,15,0	1/1:1,10:11:18.06:251,18,0	1/1:3,18:21:54.05:688,54,0	1/1:4,22:26:69.19:936,69,0	1/1:4,11:15:23.27:333,23,0	1/1:1,15:16:45.15:628,45,0	1/1:4,16:20:51.17:707,51,0	1/1:2,10:12:27.09:377,27,0	1/1:4,13:17:33.11:460,33,0	1/1:0,19:19:57.19:796,57,0	1/1:0,8:8:24.08:335,24,0	1/1:1,3:4:9.03:126,9,0	./.	1/1:3,21:24:60.16:815,60,0	./.	1/1:4,23:27:57.19:796,57,0	1/1:6,15:21:36.12:502,36,0	1/1:0,5:5:12.04:168,12,0	1/1:7,21:28:63.12:836,63,0	1/1:5,10:15:33.02:416,33,0	1/1:3,20:23:54.14:729,54,0	1/1:2,3:5:9.03:126,9,0
chr10	19490195	.	A	AG	14426.67	PASS	AC=50;AF=0.962;AN=52;BaseQRankSum=0.945;DP=426;FS=4.774;HRun=1;HaplotypeScore=340.1401;InbreedingCoeff=0.5316;MQ=33.42;MQ0=0;MQRankSum=-0.917;QD=34.03;ReadPosRankSum=3.340;VQSLOD=3.3803;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,14:14:27.09:393,27,0	1/1:0,17:17:45.15:664,45,0	./.	0/0:2,0:2:3.01:0,3,39	1/1:1,19:20:24.85:400,25,0	1/1:0,9:9:27.05:379,27,0	1/1:1,8:9:18.06:269,18,0	1/1:1,8:9:12.04:179,12,0	1/1:5,21:26:66.13:899,66,0	1/1:1,26:27:75.25:1120,75,0	1/1:3,19:22:35.21:509,35,0	1/1:0,14:14:39.13:583,39,0	1/1:1,26:27:72.20:1041,72,0	1/1:1,15:16:42.01:553,42,0	1/1:2,18:20:45.15:673,45,0	1/1:3,19:22:57.19:852,57,0	1/1:2,9:11:27.08:393,27,0	1/1:0,2:2:6.02:80,6,0	1/1:0,3:3:3:29,3,0	1/1:5,18:23:57.14:827,57,0	./.	1/1:4,27:31:62.71:931,63,0	1/1:2,18:20:45.02:598,45,0	1/1:0,6:6:9.71:175,10,0	1/1:4,23:27:66.14:937,66,0	1/1:2,15:17:45.15:672,45,0	1/1:4,23:27:72.20:1049,72,0	1/1:1,4:5:15.05:219,15,0
chr10	19490204	.	G	GA	13899.82	PASS	AB=1.000;AC=51;AF=0.981;AN=52;BaseQRankSum=0.379;DP=414;FS=0.000;HRun=1;HaplotypeScore=337.2150;InbreedingCoeff=-0.0191;MQ=37.81;MQ0=0;MQRankSum=-1.993;QD=33.57;ReadPosRankSum=3.286;VQSLOD=3.4237;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,14:15:18.06:269,18,0	1/1:1,13:15:39.13:580,39,0	./.	0/1:4,0:4:15.70:16,0,34	1/1:0,16:16:30.57:315,31,0	1/1:0,9:9:24.08:357,24,0	1/1:0,10:10:21.02:287,21,0	1/1:2,4:6:3.01:45,3,0	1/1:1,22:23:66.22:984,66,0	1/1:2,26:28:84.28:1237,84,0	1/1:1,17:18:41.77:427,42,0	1/1:2,12:14:33.06:456,33,0	1/1:0,27:27:81.27:1179,81,0	1/1:0,17:17:45.15:671,45,0	1/1:0,23:23:57.06:788,57,0	1/1:1,20:21:60.17:871,60,0	1/1:0,11:11:30.10:447,30,0	1/1:0,2:2:3.01:45,3,0	1/1:0,6:6:6.49:72,6,0	1/1:0,22:22:62.74:657,63,0	./.	1/1:2,27:29:71.59:817,72,0	1/1:3,14:17:38.87:426,39,0	1/1:1,5:6:6.70:130,7,0	1/1:3,21:24:63.06:861,63,0	1/1:0,17:17:48.16:716,48,0	1/1:4,25:29:78.18:1114,78,0	1/1:2,3:5:9.03:134,9,0
chr10	19490265	.	G	GC	4326.80	PASS	AB=0.678;AC=51;AF=0.944;AN=54;BaseQRankSum=2.602;DP=407;FS=14.324;HRun=1;HaplotypeScore=214.8066;InbreedingCoeff=0.1267;MQ=60.03;MQ0=0;MQRankSum=-3.742;QD=10.66;ReadPosRankSum=-0.180;VQSLOD=1.2172;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,6:17:17.09:107,17,0	1/1:6,4:10:11.09:57,11,0	0/1:4,3:7:4.45:113,0,4	0/1:8,2:10:31.54:82,0,32	1/1:16,7:23:14.54:91,15,0	1/1:4,6:10:14.65:87,15,0	1/1:4,4:8:14.74:119,15,0	1/1:4,6:10:26.42:199,26,0	1/1:14,16:30:51.80:371,52,0	1/1:8,6:14:30.78:234,31,0	1/1:7,3:10:8.84:56,9,0	1/1:12,2:14:5.86:35,6,0	1/1:10,9:19:41.41:290,41,0	1/1:6,14:20:40.55:229,41,0	1/1:19,14:33:38.89:325,39,0	1/1:14,5:19:17.71:115,18,0	1/1:6,5:11:14.76:97,15,0	./.	1/1:2,10:12:26.89:219,27,0	1/1:0,16:16:40.62:229,41,0	0/1:0,3:3:0:0,0,0	1/1:7,13:20:34.52:201,35,0	1/1:3,6:9:10.38:49,10,0	1/1:4,3:7:5.84:34,6,0	1/1:11,8:19:26.45:184,26,0	1/1:12,7:20:33.57:312,34,0	1/1:13,13:25:45.81:306,46,0	1/1:0,9:9:26.77:189,27,0
chr10	19490307	.	ACAC	A	9435.05	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=3.713;DP=486;FS=16.278;HRun=0;HaplotypeScore=173.3176;InbreedingCoeff=0.7586;MQ=64.67;MQ0=0;MQRankSum=-7.990;QD=20.47;ReadPosRankSum=4.494;VQSLOD=3.7998;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,18:22:12.04:196,12,0	1/1:1,11:12:12.04:196,12,0	0/0:10,0:10:25.90:0,26,523	0/0:15,0:15:45.15:0,45,992	1/1:3,29:32:20.49:341,20,0	1/1:2,11:13:21.07:342,21,0	1/1:4,8:12:15.05:245,15,0	1/1:2,6:8:18.06:294,18,0	1/1:2,22:24:33.11:538,33,0	1/1:5,20:25:38.83:626,39,0	1/1:2,12:14:15.05:245,15,0	1/1:1,25:26:30.10:489,30,0	1/1:1,10:11:12.04:195,12,0	1/1:5,17:22:27.09:437,27,0	1/1:4,25:29:33.11:526,33,0	1/1:0,22:22:24.08:392,24,0	1/1:1,18:19:24.08:379,24,0	1/1:0,3:3:6.02:98,6,0	1/1:3,4:8:18.06:279,18,0	1/1:1,17:18:42.14:685,42,0	1/1:0,7:7:11.94:185,12,0	1/1:2,24:26:33.11:525,33,0	1/1:2,9:11:9.03:147,9,0	1/1:1,13:14:2.52:47,3,0	1/1:5,27:32:51.17:832,51,0	1/1:3,21:24:48.15:759,48,0	1/1:4,16:20:11.77:196,12,0	1/1:2,5:7:15.05:245,15,0
chr10	19490359	.	GAAGGC	G	3015.80	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=5.396;DP=675;FS=7.238;HRun=0;HaplotypeScore=195.4092;InbreedingCoeff=0.9528;MQ=79.30;MQ0=0;MQRankSum=-5.869;QD=40.75;ReadPosRankSum=-0.767;VQSLOD=2.8669;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:87.30:0,87,2502	0/0:18,0:18:48.16:0,48,1434	0/0:36,0:36:87.57:0,88,2521	0/0:22,0:22:63.19:0,63,1726	0/0:26,0:26:63.16:0,63,1729	0/0:24,0:24:72.25:0,72,2159	0/0:24,0:24:72.25:0,72,2127	1/1:2,13:15:36.11:715,36,0	0/0:27,0:27:72.25:0,72,2179	0/0:24,0:24:66.23:0,66,1960	0/0:17,0:17:45.15:0,45,1230	0/0:37,0:37:99:0,99,3015	0/0:26,0:26:75.26:0,75,2263	0/0:32,0:32:84.29:0,84,2542	0/0:42,0:42:99:0,123,3753	0/0:26,0:26:66.08:0,66,1976	0/0:27,0:27:75.26:0,75,2277	0/0:11,0:11:33.11:0,33,1008	1/1:3,14:17:42.09:765,42,0	1/1:1,22:23:48.16:1004,48,0	1/1:3,16:19:32.43:691,32,0	0/0:32,0:32:75.25:0,75,2073	0/0:21,0:21:57.11:0,57,1567	0/0:20,0:20:48.16:0,48,1350	0/0:30,0:30:78.20:0,78,2170	0/0:29,0:29:84.29:0,84,2589	0/0:18,0:18:51.18:0,51,1514	0/0:1,0:1:3.01:0,3,93
chr10	19490848	.	G	GACA	23041.69	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-15.057;DP=723;FS=3.201;HRun=0;HaplotypeScore=94.1900;InbreedingCoeff=0.9988;MQ=79.93;MQ0=0;MQRankSum=-3.491;QD=59.54;ReadPosRankSum=3.475;VQSLOD=6.9055;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,111,1836	0/0:11,0:11:33.11:0,33,550	0/0:24,0:24:69.24:0,69,1157	0/0:33,0:33:96.33:0,96,1620	0/0:21,0:21:63.22:0,63,1064	1/1:1,23:24:60.21:1370,60,0	1/1:3,25:29:75.26:1706,75,0	0/0:23,0:23:57.19:0,57,972	0/0:22,0:22:63.21:0,63,1053	1/1:5,20:27:75.22:1592,75,0	1/1:0,17:17:48.16:1106,48,0	1/1:3,27:32:81.28:1865,81,0	1/1:3,28:31:87.30:1999,87,0	1/1:2,34:38:99:2282,99,0	1/1:3,40:45:99:2648,117,0	1/1:0,28:29:75.26:1728,75,0	1/1:4,23:27:75.26:1708,75,0	1/1:1,20:22:57.20:1305,57,0	0/0:17,0:17:48.13:0,48,756	0/0:14,0:14:39.13:0,39,665	0/0:34,0:34:93.30:0,93,1544	1/1:1,16:17:48.16:1091,48,0	1/1:2,17:19:48.16:1065,48,0	1/1:3,27:30:69.11:1576,69,0	0/0:20,0:20:60.21:0,60,1018	0/0:28,1:29:18.07:0,18,1355	0/0:34,0:34:99:0,102,1714	0/0:14,0:14:39.13:0,39,665
chr10	19493096	.	GATAC	G	1346.37	PASS	AB=0.887;AC=27;AF=0.482;AN=56;BaseQRankSum=6.939;DP=304;FS=0.561;HRun=0;HaplotypeScore=103.6601;InbreedingCoeff=0.6383;MQ=62.45;MQ0=6;MQRankSum=4.666;QD=10.36;ReadPosRankSum=3.388;VQSLOD=2.6187;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:7:2.95:0,3,19	0/0:5,0:5:9:0,9,92	0/0:3,0:1:3.01:0,3,30	0/1:15,0:8:5.93:6,0,25	0/0:17,0:16:21.48:0,21,201	0/1:12,5:17:10.37:209,0,10	1/1:5,1:6:9.19:68,9,0	0/0:53,0:51:99:0,152,1274	0/0:3,0:3:5.88:0,6,54	1/1:3,0:3:6.01:56,6,0	1/1:6,3:13:14.70:111,15,0	1/1:1,0:2:5.94:43,6,0	1/1:6,2:8:18.36:152,18,0	1/1:1,1:2:3:25,3,0	0/1:7,0:8:0:0,0,0	1/1:3,1:4:8.66:62,9,0	1/1:18,3:21:35.36:315,35,0	1/1:11,6:17:36.22:299,36,0	0/0:13,0:11:26.83:0,27,208	0/0:9,0:8:11.92:0,12,98	0/0:11,0:11:5.66:0,6,50	1/1:1,0:1:3:25,3,0	1/1:6,2:9:17.91:142,18,0	1/1:2,1:3:3:25,3,0	0/0:15,0:15:23.92:0,24,193	0/0:11,0:11:26.88:0,27,284	0/0:12,0:12:14.77:0,15,173	0/0:14,0:14:25.78:0,26,247
chr10	19493113	.	C	CAT	3496.17	PASS	AC=26;AF=0.500;AN=52;BaseQRankSum=3.608;DP=265;FS=2.610;HRun=0;HaplotypeScore=76.5950;InbreedingCoeff=0.8053;MQ=78.36;MQ0=1;MQRankSum=0.292;QD=34.62;ReadPosRankSum=2.744;VQSLOD=6.1498;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:4:12:0,12,132	0/0:4,0:4:9.03:0,9,115	./.	0/0:25,0:14:5.04:0,5,80	0/0:12,0:12:23.97:0,24,305	1/1:2,15:17:36.12:587,36,0	1/1:1,2:3:6.02:99,6,0	0/0:48,1:49:55.11:0,55,1237	0/0:1,0:1:2.98:0,3,21	1/1:0,5:5:15.05:234,15,0	1/1:3,4:7:12.04:187,12,0	1/1:1,4:5:6.02:99,6,0	1/1:1,5:6:12.01:201,12,0	1/1:1,0:1:3.01:48,3,0	1/1:1,5:6:9.03:134,9,0	1/1:0,3:4:11.07:144,11,0	1/1:3,18:21:51.10:849,51,0	1/1:2,14:17:40.02:628,40,0	0/0:12,0:12:33.11:0,33,419	0/0:6,0:6:15.03:0,15,191	0/0:7,0:7:8.75:0,9,101	./.	1/1:1,5:6:15.05:237,15,0	1/1:2,1:3:3.01:50,3,0	0/0:9,0:9:24.08:0,24,305	0/0:4,0:4:6.02:0,6,76	0/0:13,0:12:27:0,27,324	0/0:12,0:12:33.04:0,33,385
chr10	19493159	.	C	CA	2507.08	PASS	AC=14;AF=0.259;AN=54;BaseQRankSum=-10.007;DP=339;FS=0.579;HRun=6;HaplotypeScore=57.0781;InbreedingCoeff=0.9634;MQ=88.19;MQ0=1;MQRankSum=-1.493;QD=30.21;ReadPosRankSum=2.823;VQSLOD=4.2713;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,4:6:12.04:151,12,0	1/1:0,5:5:15.05:189,15,0	0/0:20,0:19:27.96:0,28,427	0/0:16,0:14:17.94:0,18,168	1/1:0,10:10:24.08:302,24,0	0/0:16,0:16:36.08:0,36,367	0/0:9,0:9:27.04:0,27,268	0/0:37,0:37:99:0,105,1064	0/0:4,0:4:12.03:0,12,122	0/0:13,0:13:39.09:0,39,398	0/0:4,0:4:9.02:0,9,92	0/0:7,0:7:15.03:0,15,153	0/0:11,0:12:29.10:0,29,281	0/0:7,0:7:21.05:0,21,214	0/0:12,0:12:33.07:0,33,337	0/0:9,0:9:27.06:0,27,275	0/0:22,0:22:54.12:0,54,551	0/0:16,0:16:39.05:0,39,387	0/0:20,0:20:54.10:0,54,543	0/0:7,0:7:21.03:0,21,208	0/0:10,0:10:30.07:0,30,306	./.	0/0:10,0:10:27.06:0,27,275	0/0:5,0:5:15.03:0,15,153	1/1:3,15:18:39.12:491,39,0	1/1:1,6:7:18.06:226,18,0	1/1:0,13:12:39.12:491,39,0	1/1:2,22:23:69.19:851,69,0
chr10	19496515	.	TGGGGAG	T	3168.35	PASS	AB=0.971;AC=30;AF=0.536;AN=56;BaseQRankSum=-9.167;DP=533;FS=0.485;HRun=0;HaplotypeScore=146.1326;InbreedingCoeff=-0.1125;MQ=59.26;MQ0=0;MQRankSum=-2.836;QD=7.44;ReadPosRankSum=0.170;VQSLOD=2.6987;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:7,20:27:26.63:371,27,0	1/1:0,9:9:11.95:176,12,0	0/0:21,0:21:45.07:0,45,1264	0/0:11,0:11:24.08:0,24,762	1/1:1,19:20:2.76:20,3,0	0/1:13,0:13:21.87:22,0,226	0/1:24,0:24:99:120,0,444	0/1:18,0:18:57.02:57,0,525	0/0:26,0:25:60.12:0,60,1532	0/0:27,0:27:19.80:0,20,1303	0/1:13,0:13:7.96:8,0,97	0/1:25,0:25:86.76:87,0,402	0/1:22,0:22:14.88:15,0,254	0/1:25,0:25:28.59:29,0,338	1/1:3,18:21:20.88:214,21,0	0/0:22,0:22:36.13:0,36,688	0/1:18,0:18:58.33:58,0,374	0/1:11,0:11:3.50:3,0,387	0/1:21,0:20:0.90:1,0,709	0/1:20,0:20:48.75:49,0,97	0/1:20,0:20:36.23:36,0,90	0/1:18,0:18:49.41:49,0,76	0/1:23,0:23:26.42:26,0,206	0/1:19,0:19:43.44:71,0,43	1/1:0,15:15:30.10:531,30,0	0/1:3,21:24:11.41:991,0,11	1/1:4,9:13:8.99:111,9,0	1/1:1,6:7:15.05:300,15,0
chr10	19496522	.	G	GA	10042.98	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-3.462;DP=473;FS=1.430;HRun=0;HaplotypeScore=84.5932;InbreedingCoeff=0.8819;MQ=55.90;MQ0=0;MQRankSum=-5.116;QD=23.69;ReadPosRankSum=0.861;VQSLOD=6.0831;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:20:16.87:261,17,0	1/1:9,0:9:11.95:139,12,0	0/0:17,0:17:45.06:0,45,587	0/0:9,0:9:24.08:0,24,326	1/1:19,0:19:2.97:21,3,0	1/1:0,12:12:17.99:251,18,0	1/1:0,24:24:52.21:694,52,0	1/1:0,15:15:45.08:629,45,0	0/0:23,0:22:60.11:0,60,788	1/1:0,25:25:69.23:1069,69,0	1/1:0,11:11:15.05:234,15,0	1/1:0,20:20:42.03:596,42,0	1/1:0,18:18:24:342,24,0	1/1:1,24:25:35.95:560,36,0	1/1:18,0:18:20.83:163,21,0	1/1:0,22:22:51.48:761,51,0	1/1:0,15:15:33.01:459,33,0	1/1:0,9:9:27.09:422,27,0	1/1:0,18:17:51.07:738,51,0	1/1:0,19:19:29.65:306,30,0	1/1:0,17:17:15:206,15,0	1/1:0,18:18:28.85:392,29,0	1/1:0,23:23:20.99:299,21,0	1/1:1,14:15:14.63:175,15,0	1/1:15,0:15:30.03:387,30,0	1/1:21,1:22:57:657,57,0	1/1:9,0:9:8.99:103,9,0	1/1:6,0:6:15.04:180,15,0
chr10	19498445	.	A	AGT	8497.54	PASS	AB=0.799;AC=25;AF=0.446;AN=56;BaseQRankSum=-7.385;DP=1079;FS=3.087;HRun=0;HaplotypeScore=307.9519;InbreedingCoeff=0.3832;MQ=52.28;MQ0=24;MQRankSum=2.142;QD=13.17;ReadPosRankSum=1.386;VQSLOD=4.1888;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:16,0:30:17.28:17,0,25	0/0:2,0:11:4.17:0,4,72	0/1:85,0:25:21.75:22,0,176	0/0:75,0:27:8.34:0,8,88	0/0:10,0:28:17.27:0,17,97	0/1:10,14:24:34.17:496,0,34	1/1:29,21:49:0.41:575,0,0	0/0:39,1:39:36.77:0,37,879	0/0:34,0:34:53.96:0,54,652	1/1:26,17:44:10.40:1164,10,0	1/1:5,12:17:30.10:484,30,0	0/1:22,23:44:11.53:462,0,12	1/1:18,20:38:59.17:963,59,0	0/1:23,24:46:71.73:358,0,72	0/0:11,0:35:10:0,10,116	1/1:16,18:35:16.20:444,16,0	0/1:18,22:41:7.54:783,0,8	1/1:9,21:28:17.51:784,18,0	0/0:33,0:29:37.24:0,37,461	0/0:37,0:38:59.85:0,60,703	0/0:77,0:72:72.05:0,72,866	1/1:11,18:29:5.25:548,5,0	1/1:12,25:37:56.47:907,56,0	1/1:25,29:54:14.13:478,14,0	0/0:7,0:33:1.37:0,1,65	0/1:13,0:37:12.75:13,0,268	0/0:8,0:19:22.64:0,23,110	0/0:2,0:7:14.20:0,14,70
chr10	19498492	.	ATG	A	2917.37	PASS	AB=0.709;AC=34;AF=0.607;AN=56;BaseQRankSum=0.201;DP=820;FS=3.258;HRun=0;HaplotypeScore=438.4175;InbreedingCoeff=0.2010;MQ=37.14;MQ0=13;MQRankSum=-2.800;QD=5.08;ReadPosRankSum=4.860;VQSLOD=1.3614;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:17,6:23:11.98:26,0,12	1/1:3,11:14:1.19:201,1,0	0/0:47,0:13:8.21:0,8,156	0/0:41,0:15:10:0,10,137	0/1:3,16:19:0:0,0,0	0/1:7,15:22:6.15:63,0,6	1/1:17,10:27:8.79:81,9,0	0/0:48,0:44:36.24:0,36,129	0/0:29,0:28:39.91:0,40,507	1/1:12,14:26:45.05:536,45,0	1/1:2,16:18:5.62:42,6,0	1/1:13,33:45:22:246,22,0	1/1:12,20:32:18.23:248,18,0	0/1:14,24:38:1.41:56,0,1	0/0:38,1:39:14.59:0,15,165	0/1:12,24:36:30.46:58,0,30	1/1:16,8:24:0.08:81,0,0	0/1:11,5:15:31.36:117,0,31	0/1:26,0:20:12.91:13,0,100	0/1:40,0:40:9.19:11,0,9	0/0:42,0:38:1.67:0,2,6	0/1:6,26:32:17.14:26,0,17	1/1:10,19:29:1.19:53,1,0	1/1:24,5:28:9.05:63,9,0	0/1:10,14:24:4.96:14,0,5	1/1:12,19:31:38.22:691,38,0	1/1:7,9:16:30.09:364,30,0	1/1:2,4:6:8.99:94,9,0
chr10	19498502	.	GT	G	921.88	PASS	AB=0.860;AC=9;AF=0.161;AN=56;BaseQRankSum=-1.917;DP=753;FS=2.210;HRun=1;HaplotypeScore=483.7307;InbreedingCoeff=0.0965;MQ=34.98;MQ0=10;MQRankSum=-1.009;QD=4.43;ReadPosRankSum=-3.017;VQSLOD=-0.3907;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:0.98:0,1,69	0/0:13,0:13:12.40:0,12,60	0/0:31,0:8:21.03:0,21,276	0/0:31,0:9:23.55:0,24,280	1/1:21,1:22:1.10:4,1,0	0/0:20,0:20:16.33:0,16,100	0/0:21,0:21:8.21:0,8,70	0/1:29,0:25:99:484,0,163	0/0:32,0:31:38.47:0,38,576	0/0:24,0:24:36.44:0,36,301	0/0:18,0:18:3.13:0,3,31	0/0:50,0:49:21.70:0,22,147	0/0:33,0:33:34.58:0,35,252	0/1:38,1:39:16.58:17,0,60	0/0:38,0:38:11.02:0,11,185	0/0:36,0:36:15.86:0,16,89	0/1:21,0:21:52.58:53,0,215	0/0:15,0:15:8.88:0,9,138	0/1:14,7:17:85.17:167,0,85	0/1:11,31:42:13.08:212,0,13	1/1:15,19:30:5.33:114,5,0	0/0:34,0:34:8.81:0,9,56	0/0:29,0:29:5.99:0,6,80	0/0:24,0:24:10.22:0,10,91	0/0:27,0:27:13.69:0,14,127	0/0:26,0:26:28.86:0,29,190	0/0:14,0:14:10.26:0,10,25	0/0:6,0:6:7.74:0,8,61
chr10	19498506	.	GTGGC	G	578.01	PASS	AB=0.983;AC=19;AF=0.339;AN=56;BaseQRankSum=-4.541;DP=655;FS=4.453;HRun=0;HaplotypeScore=475.5186;InbreedingCoeff=-0.2401;MQ=34.15;MQ0=8;MQRankSum=-0.056;QD=1.49;ReadPosRankSum=6.849;VQSLOD=0.0024;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:5.24:0,5,49	0/0:13,0:13:10.31:0,10,77	0/0:24,0:6:7.28:0,7,202	0/0:24,0:7:19.19:0,19,221	0/1:21,0:21:0.65:1,0,1	0/1:17,1:18:48.43:64,0,48	1/1:11,1:12:1.49:38,1,0	0/0:13,0:10:16.53:0,17,64	0/0:33,0:33:68.54:0,69,808	0/1:18,1:19:45.64:86,0,46	0/1:18,0:18:7.04:36,0,7	0/1:47,2:49:44.15:44,0,169	0/1:31,0:32:46.97:47,0,164	0/1:32,1:33:18.15:18,0,100	0/0:37,0:37:55.17:0,55,395	0/0:34,0:34:21.21:0,21,198	0/1:16,0:16:23.66:24,0,32	0/1:13,0:13:39.60:40,0,45	0/1:17,0:14:9.84:10,0,87	0/0:40,0:40:10.54:0,11,59	0/0:28,0:25:1.55:0,2,6	0/1:32,0:32:18.17:24,0,18	0/1:26,1:27:35.44:52,0,35	1/1:16,3:18:0.32:98,0,0	0/1:20,0:20:1.61:2,0,46	0/1:24,0:24:24.61:116,0,25	0/1:17,0:17:27.93:28,0,42	0/0:6,0:6:10.06:0,10,84
chr10	19498507	.	TGGC	T	1302.43	PASS	AB=0.990;AC=34;AF=0.607;AN=56;BaseQRankSum=-0.329;DP=651;FS=7.920;HRun=0;HaplotypeScore=480.5700;InbreedingCoeff=-0.1260;MQ=34.01;MQ0=5;MQRankSum=-0.272;QD=2.21;ReadPosRankSum=4.325;VQSLOD=-0.3995;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:14,0:14:7.41:7,0,22	0/1:12,1:13:0.89:78,0,1	0/0:21,0:5:11.93:0,12,152	0/0:20,0:7:17.95:0,18,196	1/1:21,0:21:0.57:3,1,0	1/1:19,0:19:11.20:70,11,0	1/1:13,0:13:0.87:3,1,0	0/1:10,0:7:0.13:13,0,0	0/1:34,0:33:55.26:55,0,381	0/1:19,0:19:13.35:122,0,13	1/1:18,0:18:3.82:21,4,0	0/1:49,0:48:17.52:93,0,18	0/1:33,0:33:47.72:48,0,106	0/1:33,0:33:4.34:22,0,4	0/1:39,0:39:75.10:75,0,112	1/1:37,0:37:15.42:126,15,0	0/1:17,0:17:8.67:49,0,9	1/1:12,1:13:11.68:125,12,0	0/1:15,0:12:50.03:89,0,50	0/1:38,0:38:5.96:26,0,6	0/1:27,0:25:0.75:5,0,1	0/1:32,1:33:0.91:9,0,1	1/1:26,1:27:17.57:78,18,0	1/1:18,0:17:1.87:5,2,0	0/0:19,1:20:3.61:0,4,12	1/1:25,1:26:25.96:229,26,0	0/1:16,1:17:21.34:75,0,21	0/1:6,0:6:25.13:25,0,33
chr10	19498611	.	G	GTGTA	9779.40	PASS	AB=0.940;AC=39;AF=0.696;AN=56;BaseQRankSum=0.850;DP=799;FS=0.530;HRun=0;HaplotypeScore=497.2867;InbreedingCoeff=-0.0418;MQ=37.32;MQ0=8;MQRankSum=1.530;QD=13.53;ReadPosRankSum=1.178;VQSLOD=3.3246;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,5:9:5.69:160,6,0	1/1:8,4:12:11.93:321,12,0	0/0:36,0:10:11.64:0,12,155	0/0:25,0:5:2.96:0,3,52	1/1:8,22:30:1.36:52,1,0	1/1:17,0:17:5.67:212,6,0	0/1:26,0:26:24.32:24,0,65	0/1:29,0:27:93.46:135,0,93	0/1:27,0:32:37.14:437,0,37	0/1:55,0:55:99:905,0,583	1/1:18,0:18:0.96:4,1,0	0/1:48,0:48:0.68:360,0,1	0/1:31,0:31:80.68:231,0,81	1/1:49,0:49:33.31:365,33,0	1/1:44,0:47:41.17:710,41,0	0/1:40,0:40:99:258,0,142	0/1:8,0:8:32.97:86,0,33	0/1:10,0:10:88.75:157,0,89	0/1:9,0:14:12.80:260,0,13	1/1:15,0:27:14.46:164,14,0	1/1:20,0:40:1.20:8,1,0	1/1:37,0:37:11.18:118,11,0	0/1:20,1:28:0.91:45,0,1	0/0:15,0:15:2.55:0,3,22	1/1:13,31:44:53.72:1411,54,0	1/1:7,23:30:25.19:1547,25,0	1/1:2,25:27:57.19:1420,57,0	1/1:5,3:8:20.97:391,21,0
chr10	19498612	.	TGTGCGC	T	1187.92	PASS	AB=0.986;AC=23;AF=0.411;AN=56;BaseQRankSum=0.021;DP=789;FS=3.508;HRun=0;HaplotypeScore=497.6814;InbreedingCoeff=-0.4905;MQ=36.29;MQ0=8;MQRankSum=-1.519;QD=1.92;ReadPosRankSum=-4.376;VQSLOD=-0.0011;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:8,1:9:7.12:0,7,24	0/0:10,2:12:10.46:0,10,83	0/0:34,0:10:8.43:0,8,162	0/0:23,0:3:2.82:0,3,66	0/0:27,3:30:11.36:0,11,42	1/1:17,0:17:3.02:28,3,0	0/1:26,0:26:1.65:2,0,17	0/1:29,0:27:75.42:149,0,75	0/1:33,0:32:27.28:27,0,106	0/1:53,0:53:99:245,0,565	0/0:18,0:18:1.05:0,1,16	0/1:46,0:46:50.91:51,0,87	0/1:31,0:31:75.17:75,0,75	0/1:47,0:47:26.13:37,0,26	0/1:47,0:47:41.93:103,0,42	0/1:40,0:40:28.98:29,0,107	0/1:8,0:8:26.44:32,0,26	0/1:10,0:10:22.25:22,0,97	0/1:15,0:14:53:53,0,59	0/1:27,0:27:39.85:40,0,41	0/1:43,0:39:12.05:19,0,12	1/1:37,0:37:3.20:12,3,0	0/1:28,0:28:7.75:17,0,8	0/1:15,0:15:9.37:36,0,9	0/0:36,8:44:4.30:0,4,378	0/1:27,3:30:99:226,0,278	0/1:26,2:27:56.65:57,0,377	0/1:7,1:8:78.86:79,0,99
chr10	19498614	.	TGC	T	1720.68	PASS	AB=0.947;AC=30;AF=0.536;AN=56;BaseQRankSum=0.813;DP=768;FS=0.921;HRun=0;HaplotypeScore=472.1979;InbreedingCoeff=-0.2818;MQ=36.49;MQ0=8;MQRankSum=-0.138;QD=2.49;ReadPosRankSum=0.487;VQSLOD=-0.1877;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:7,0:7:2.13:31,2,0	0/0:10,0:10:5.62:0,6,17	0/0:33,0:10:11.52:0,12,120	0/0:22,0:3:2.95:0,3,19	0/1:29,0:29:10.37:10,0,29	1/1:14,0:16:19.35:109,19,0	0/1:24,1:25:17.27:17,0,21	1/1:16,11:25:14.71:251,15,0	0/1:31,0:32:34.47:55,0,34	0/1:45,0:53:42.65:227,0,43	0/1:17,0:17:6.23:7,0,6	0/1:44,0:45:37.55:126,0,38	0/1:29,0:30:20.38:88,0,20	1/1:44,0:46:0.79:108,1,0	1/1:44,0:48:16.80:151,17,0	0/1:37,0:39:18.78:125,0,19	0/1:7,0:8:24.33:26,0,24	0/0:10,0:10:3.06:0,3,35	1/1:11,3:13:20.26:241,20,0	0/1:16,10:26:0.51:38,0,1	0/1:39,6:41:4.98:5,0,11	0/1:34,0:37:25.17:25,0,25	0/1:25,0:26:1.13:18,0,1	0/1:15,0:15:3.90:29,0,4	0/1:42,0:42:38.35:56,0,38	0/1:29,0:29:41.06:83,0,41	0/1:28,0:27:27.62:28,0,43	0/1:7,0:7:5.78:22,0,6
chr10	19498620	.	TAC	T	2282.12	PASS	AB=0.992;AC=26;AF=0.464;AN=56;BaseQRankSum=3.573;DP=764;FS=4.168;HRun=0;HaplotypeScore=478.5238;InbreedingCoeff=0.0633;MQ=33.08;MQ0=7;MQRankSum=-0.794;QD=3.99;ReadPosRankSum=3.471;VQSLOD=0.7550;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:8:1.52:0,2,5	0/0:9,1:10:11.70:0,12,80	0/0:27,0:6:8.53:0,9,95	0/0:16,0:2:3:0,3,25	0/0:32,0:32:5.31:0,5,35	1/1:18,0:18:11.75:124,12,0	1/1:28,0:28:8.76:67,9,0	0/1:25,0:24:94.37:94,0,158	0/1:34,0:33:43.35:61,0,43	1/1:51,1:52:38.46:611,38,0	0/1:16,0:16:5.97:24,0,6	0/1:41,1:42:12.91:169,0,13	1/1:29,1:30:8.44:303,8,0	1/1:43,1:44:7.91:182,8,0	0/1:53,0:53:46.19:121,0,46	1/1:35,1:36:22.06:273,22,0	0/1:8,0:8:4.78:34,0,5	0/1:9,0:9:1.27:60,0,1	0/1:12,0:11:57.51:81,0,58	0/0:26,0:26:12.61:0,13,74	0/1:47,1:46:2.44:2,0,35	0/1:35,0:35:23.24:85,0,23	0/1:24,0:24:0.69:38,0,1	0/1:16,1:17:3.91:46,0,4	0/0:42,0:42:31.02:0,31,252	0/1:32,0:32:73.05:73,0,216	0/0:29,0:28:14.55:0,15,268	0/1:8,0:8:0.52:1,0,83
chr10	19498621	.	ACG	A	4424.79	PASS	AB=0.695;AC=23;AF=0.411;AN=56;BaseQRankSum=3.042;DP=750;FS=11.632;HRun=0;HaplotypeScore=462.3699;InbreedingCoeff=-0.1320;MQ=31.81;MQ0=7;MQRankSum=-0.864;QD=8.71;ReadPosRankSum=4.505;VQSLOD=3.5491;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:7,1:8:10.86:0,11,60	0/0:8,2:10:12:0,12,116	0/0:27,0:5:5.38:0,5,22	0/0:16,0:3:2.37:0,2,8	0/0:29,3:32:17.01:0,17,51	0/1:7,10:17:15.69:166,0,16	1/1:15,11:26:2.29:106,2,0	0/1:16,9:24:99:175,0,265	0/1:23,9:31:88.41:146,0,88	1/1:25,27:52:29.83:1307,30,0	0/1:5,9:14:5.96:41,0,6	0/1:19,22:41:23.62:320,0,24	1/1:10,18:29:13.69:535,14,0	0/1:15,27:42:13.98:272,0,14	0/1:31,21:52:99:215,0,109	1/1:16,19:35:9.52:454,10,0	0/1:2,6:8:8.39:55,0,8	0/1:4,5:9:18.70:140,0,19	0/1:9,3:11:67.18:112,0,67	0/0:16,10:26:14.78:0,15,136	0/0:49,1:47:0.64:0,1,54	0/1:12,20:32:22.73:155,0,23	0/1:12,12:24:0.48:73,0,0	0/1:8,10:18:3.92:29,0,4	0/0:34,8:42:33.54:0,34,468	0/1:27,5:32:99:110,0,412	0/0:26,3:28:6.63:0,7,482	0/1:7,1:8:14.34:14,0,146
chr10	19498641	.	G	GTGTGTGTGTGTT	18088.93	PASS	AB=0.965;AC=30;AF=0.536;AN=56;BaseQRankSum=-2.093;DP=769;FS=25.510;HRun=0;HaplotypeScore=488.2309;InbreedingCoeff=0.4935;MQ=33.37;MQ0=2;MQRankSum=-2.204;QD=36.32;ReadPosRankSum=0.031;VQSLOD=2.6871;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:10:3.43:0,3,24	0/0:15,0:15:14.41:0,14,71	0/0:17,0:5:9.03:0,9,145	0/0:17,0:10:26.96:0,27,341	0/0:42,0:41:9.37:0,9,74	1/1:15,1:17:50.84:1085,51,0	1/1:26,0:32:59.55:666,60,0	0/0:30,0:29:19.01:0,19,644	0/1:25,0:30:25.88:710,0,26	1/1:39,4:48:99:4491,133,0	1/1:8,1:13:15.61:176,16,0	1/1:29,7:38:89.35:1909,89,0	1/1:27,2:31:79.85:1957,80,0	1/1:26,5:33:71.66:1657,72,0	0/1:35,0:49:74.88:993,0,75	1/1:20,3:23:50.88:1440,51,0	1/1:8,2:10:12.64:473,13,0	0/1:4,2:9:41.01:594,0,41	0/1:18,0:15:99:169,0,277	0/1:25,0:32:99:113,0,250	0/0:50,0:54:28.95:0,29,358	1/1:16,5:22:55.77:791,56,0	1/1:25,3:31:49.57:607,50,0	1/1:19,1:26:13.61:132,14,0	0/0:40,0:40:45.28:0,45,197	0/1:31,0:34:99:127,0,341	0/0:33,0:32:44.85:0,45,313	0/0:10,0:10:3.16:0,3,127
chr10	19498692	.	G	GTGTA	1527.44	PASS	AB=0.854;AC=7;AF=0.125;AN=56;BaseQRankSum=7.657;DP=1135;FS=7.526;HRun=0;HaplotypeScore=348.3183;InbreedingCoeff=-0.1433;MQ=39.94;MQ0=50;MQRankSum=-7.350;QD=6.61;ReadPosRankSum=-2.346;VQSLOD=0.9534;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:37,0:35:20.39:20,0,753	0/1:14,5:19:41.56:42,0,547	0/0:68,0:12:29.90:0,30,451	0/0:67,0:24:58.98:0,59,1045	0/1:40,6:46:49.02:49,0,524	0/0:24,0:24:60.16:0,60,1086	0/0:43,0:43:69.04:0,69,1216	0/0:63,0:57:99:0,141,2316	0/0:38,0:38:81.28:0,81,1498	0/0:57,0:51:99:0,127,2569	0/0:15,0:15:32.85:0,33,570	0/0:52,0:51:86.95:0,87,1597	0/0:43,0:43:99:0,111,2030	0/0:38,0:38:75.19:0,75,1303	0/0:55,0:53:87.17:0,87,1531	0/0:39,0:39:75.09:0,75,1220	0/0:24,0:24:41.39:0,41,934	0/0:23,0:22:15.68:0,16,886	0/0:39,0:26:66.60:0,67,1102	0/0:46,0:45:99:0,101,1758	0/0:73,0:67:93.71:0,94,1702	0/0:19,0:18:38.41:0,38,689	0/0:43,0:40:68.75:0,69,1276	0/0:35,0:35:44.37:0,44,733	0/1:33,6:39:99:328,0,1026	0/1:35,9:41:99:751,0,1076	0/1:30,4:33:99:227,0,766	0/1:7,4:11:99:242,0,274
chr10	19498710	.	ATG	A	2260.61	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=4.782;DP=1067;FS=7.657;HRun=0;HaplotypeScore=263.4626;InbreedingCoeff=0.8740;MQ=44.17;MQ0=26;MQRankSum=-4.330;QD=24.57;ReadPosRankSum=0.206;VQSLOD=2.5221;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,1:37:43.30:0,43,1256	0/0:15,0:15:27.07:0,27,421	0/0:55,0:15:33.11:0,33,516	0/0:62,0:26:59.23:0,59,945	0/0:43,1:44:12.23:0,12,690	0/0:25,0:25:51.17:0,51,833	0/0:36,1:37:0.92:0,1,569	0/0:45,1:41:57.15:0,57,913	1/1:8,32:40:81.23:1019,81,0	0/0:53,0:51:99:0,111,1733	0/0:18,0:18:36.12:0,36,593	0/0:55,1:56:85.48:0,85,1908	0/0:43,0:43:99:0,105,1708	0/0:35,0:35:75.24:0,75,1218	1/1:8,44:52:99:1362,108,0	0/0:44,0:44:99:0,105,1739	0/0:26,0:26:72.25:0,72,1188	0/0:21,1:21:19.38:0,19,859	0/0:39,0:33:28.38:0,28,950	0/0:45,0:44:99:0,105,1740	0/0:67,1:64:56.30:0,56,1469	0/0:17,0:16:42.06:0,42,665	0/0:42,0:39:40.83:0,41,1153	0/0:39,0:39:77.29:0,77,1238	0/0:33,0:33:66.23:0,66,1097	0/0:35,1:33:31.22:0,31,932	0/0:25,0:25:63.06:0,63,981	0/0:11,0:11:24.04:0,24,369
chr10	19500939	.	TAA	T	11891.35	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=9.597;DP=526;FS=10.031;HRun=5;HaplotypeScore=70.7382;InbreedingCoeff=0.9943;MQ=81.24;MQ0=3;MQRankSum=-1.443;QD=34.77;ReadPosRankSum=3.397;VQSLOD=3.6606;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:75.19:0,75,1277	0/0:9,0:9:27.08:0,27,466	0/0:17,0:17:36.11:0,36,580	0/0:14,0:14:42.11:0,42,644	0/0:18,0:18:54.17:0,54,960	1/1:1,28:28:75.25:1049,75,0	1/1:0,14:14:33.11:462,33,0	1/1:2,18:20:54.14:733,54,0	1/1:0,8:8:21.07:294,21,0	1/1:1,9:10:30.10:418,30,0	1/1:1,14:14:33.02:437,33,0	1/1:0,17:17:42.14:587,42,0	1/1:2,20:22:54.18:755,54,0	1/1:1,7:8:15.05:210,15,0	0/0:19,0:19:51.15:0,51,876	1/1:0,13:13:36.12:503,36,0	1/1:4,22:26:51.17:713,51,0	1/1:1,32:32:93.31:1297,93,0	1/1:2,17:19:51.14:675,51,0	1/1:0,26:26:72.24:995,72,0	1/1:0,15:15:39.13:546,39,0	1/1:2,25:27:66.22:917,66,0	1/1:3,20:23:45.08:629,45,0	1/1:0,17:17:48.16:671,48,0	0/0:27,0:27:75.25:0,75,1341	0/0:25,1:26:33.26:0,33,1227	0/0:24,0:24:69.24:0,69,1264	0/0:5,0:5:15.05:0,15,275
chr10	19502657	.	CA	C	740.11	PASS	AB=0.844;AC=13;AF=0.232;AN=56;BaseQRankSum=3.748;DP=664;FS=8.138;HRun=15;HaplotypeScore=82.6460;InbreedingCoeff=0.2001;MQ=55.29;MQ0=25;MQRankSum=1.229;QD=3.20;ReadPosRankSum=3.363;VQSLOD=0.0833;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:24:39.26:0,39,322	0/1:5,1:6:1.27:1,0,114	0/1:40,1:9:7.35:7,0,48	0/0:40,0:10:3.39:0,3,57	0/0:23,5:30:10.38:0,10,282	0/0:28,1:29:36.41:0,36,447	0/0:16,0:16:41.89:0,42,343	0/1:15,12:27:11.01:192,0,11	0/0:25,2:30:19.54:0,20,435	0/0:33,1:30:24.38:0,24,418	0/0:26,1:28:39.75:0,40,425	0/0:15,1:16:7.40:0,7,158	0/0:16,0:21:19.69:0,20,161	0/0:13,2:14:4.44:0,4,136	1/1:8,0:19:3.45:33,3,0	0/0:27,3:29:27.64:0,28,364	0/1:19,3:22:17.33:17,0,175	0/0:15,1:18:25.40:0,25,311	0/1:9,8:18:34.43:121,0,34	1/1:10,22:35:61.86:374,62,0	1/1:4,10:14:0.27:127,0,0	0/0:24,1:29:29.22:0,29,490	0/0:11,0:14:23.76:0,24,183	0/0:19,0:19:39.81:0,40,322	0/1:21,2:23:4.53:5,0,312	0/0:23,0:23:38.29:0,38,338	0/1:16,1:22:8.55:9,0,158	0/0:8,0:10:14.66:0,15,101
chr10	19503088	.	G	GA	11709.59	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-12.071;DP=660;FS=0.000;HRun=9;HaplotypeScore=62.4054;InbreedingCoeff=0.9371;MQ=74.87;MQ0=0;MQRankSum=-0.542;QD=25.68;ReadPosRankSum=0.707;VQSLOD=5.2586;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:68.98:0,69,598	0/0:2,0:2:6:0,6,52	0/0:12,0:13:13.98:0,14,106	0/0:22,0:20:1.53:0,2,114	0/0:43,0:43:99:0,123,1059	1/1:5,35:40:99:1142,105,0	1/1:2,7:9:21.06:232,21,0	1/1:8,30:38:87.18:932,87,0	1/1:3,18:21:51.14:564,51,0	1/1:4,32:37:99:1068,99,0	1/1:4,14:19:47.96:511,48,0	1/1:1,16:18:18.90:419,19,0	1/1:4,18:24:30.76:534,31,0	1/1:3,12:16:29.91:313,30,0	1/1:3,30:33:81.22:896,81,0	1/1:3,21:24:54.15:597,54,0	1/1:4,16:20:45.12:498,45,0	1/1:2,9:11:24.06:265,24,0	1/1:4,18:22:57.11:609,57,0	1/1:7,31:39:32.10:798,32,0	1/1:1,17:18:48.13:531,48,0	1/1:4,15:19:13.46:372,13,0	1/1:2,25:27:75.20:829,75,0	1/1:2,19:21:54.15:597,54,0	0/0:18,1:19:14.81:0,15,357	0/0:29,0:29:80.98:0,81,703	0/0:35,0:35:89.98:0,90,781	0/0:14,0:14:38.99:0,39,338
chr10	19504575	.	TTTTA	T	21395.60	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=1.017;DP=737;FS=14.325;HRun=0;HaplotypeScore=126.9538;InbreedingCoeff=0.9447;MQ=71.49;MQ0=5;MQRankSum=-7.126;QD=31.23;ReadPosRankSum=5.612;VQSLOD=4.0444;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,32:35:48.15:827,48,0	1/1:1,12:13:23.89:348,24,0	0/0:32,0:29:52.53:0,53,766	0/0:20,0:19:50.60:0,51,725	1/1:1,29:30:74.62:1020,75,0	1/1:1,20:21:24.08:428,24,0	1/1:1,16:17:24.08:428,24,0	1/1:4,24:28:71.83:948,72,0	1/1:0,29:28:65.96:1174,66,0	1/1:2,28:30:78.90:1099,79,0	1/1:1,24:24:65.18:775,65,0	1/1:3,30:33:75.26:1338,75,0	1/1:4,31:34:56.83:980,57,0	1/1:4,28:31:54.19:963,54,0	1/1:1,33:34:66.23:1162,66,0	1/1:1,16:16:27.09:482,27,0	1/1:6,25:31:51.09:873,51,0	1/1:0,25:24:32.78:589,33,0	1/1:6,18:23:50.92:663,51,0	1/1:4,20:24:61.94:788,62,0	1/1:2,20:22:45.15:803,45,0	1/1:2,29:30:80.27:1025,80,0	1/1:1,18:19:38.89:694,39,0	1/1:3,31:34:63.21:1104,63,0	1/1:4,27:30:45.15:803,45,0	1/1:3,26:29:78.06:1094,78,0	1/1:2,28:30:51.15:910,51,0	1/1:2,4:6:5.99:76,6,0
chr10	19505290	.	AT	A	3746.39	PASS	AB=0.538;AC=13;AF=0.232;AN=56;BaseQRankSum=11.898;DP=548;FS=1.239;HRun=6;HaplotypeScore=53.8083;InbreedingCoeff=0.8927;MQ=81.03;MQ0=0;MQRankSum=-2.424;QD=26.95;ReadPosRankSum=2.701;VQSLOD=4.0985;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,30:32:84.21:903,84,0	1/1:0,5:5:12.03:129,12,0	0/0:17,0:17:42.12:0,42,511	0/0:14,0:14:39.12:0,39,488	1/1:4,17:21:48.12:516,48,0	0/0:22,0:22:63.20:0,63,829	0/0:18,0:18:54.17:0,54,698	0/0:34,0:34:84.27:0,84,1105	0/0:17,0:17:45.15:0,45,592	0/0:28,0:28:78.25:0,78,1014	0/0:22,0:22:60.20:0,60,788	0/0:18,0:18:54.18:0,54,710	0/0:15,0:15:36.12:0,36,472	0/0:17,0:17:51.17:0,51,670	0/0:14,0:14:42.12:0,42,538	0/0:15,0:15:42.14:0,42,552	0/0:26,0:26:75.24:0,75,986	0/0:25,0:25:69.15:0,69,844	0/0:20,0:20:60.19:0,60,775	0/0:19,0:19:51.17:0,51,670	0/0:7,0:7:18.06:0,18,236	0/0:19,0:19:51.17:0,51,671	0/0:31,0:31:84.27:0,84,1105	0/0:11,0:11:33.08:0,33,404	1/1:2,21:23:57.14:613,57,0	0/1:3,18:21:21.81:491,0,22	1/1:2,18:20:51.13:548,51,0	1/1:0,17:17:51.13:548,51,0
chr10	19509514	.	A	AATGTGG	1395.64	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-6.596;DP=747;FS=0.000;HRun=0;HaplotypeScore=156.3080;InbreedingCoeff=0.9941;MQ=91.74;MQ0=0;MQRankSum=-6.565;QD=48.13;ReadPosRankSum=0.046;VQSLOD=3.2926;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:66.17:0,66,1304	0/0:17,0:17:36.11:0,36,691	0/0:35,0:35:45.13:0,45,866	0/0:30,0:30:45.08:0,45,842	0/0:15,0:15:21.06:0,21,407	0/0:26,0:26:66.19:0,66,1274	0/0:21,0:21:42.10:0,42,831	0/0:32,0:32:45.12:0,45,784	1/1:9,17:29:45.15:1491,45,0	0/0:42,0:42:75.25:0,75,1544	0/0:23,0:23:42.12:0,42,799	0/0:30,0:30:78.27:0,78,1642	0/0:30,0:30:72.25:0,72,1515	0/0:34,0:34:87.28:0,87,1782	0/0:34,0:34:66.22:0,66,1353	0/0:21,0:21:42.14:0,42,855	0/0:24,0:24:51.15:0,51,1026	0/0:27,0:27:51.17:0,51,1067	0/0:27,0:27:30.09:0,30,559	0/0:16,0:16:33.10:0,33,664	0/0:29,0:29:54.19:0,54,1146	0/0:31,0:31:60.20:0,60,1238	0/0:15,0:15:30.10:0,30,625	0/0:20,0:20:39.08:0,39,732	0/0:23,0:23:33.11:0,33,640	0/0:30,0:30:54.19:0,54,1138	0/0:30,0:30:72.23:0,72,1471	0/0:16,0:16:48.10:0,48,895
chr10	19510471	.	G	GAGGCAGGC	16106.22	PASS	AB=1.000;AC=39;AF=0.696;AN=56;BaseQRankSum=0.334;DP=652;FS=2.240;HRun=0;HaplotypeScore=211.5958;InbreedingCoeff=0.6514;MQ=72.62;MQ0=5;MQRankSum=-5.895;QD=32.41;ReadPosRankSum=-3.618;VQSLOD=3.7265;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:26:93.08:93,0,548	0/0:11,0:11:22.03:0,22,250	0/0:24,0:18:28.73:0,29,576	0/0:22,0:19:27.74:0,28,453	0/0:30,0:30:40.07:0,40,847	1/1:23,0:23:63.12:1187,63,0	1/1:26,0:24:51.11:831,51,0	1/1:25,0:25:62.70:997,63,0	1/1:5,29:36:18.06:557,18,0	1/1:20,0:20:38.51:767,39,0	1/1:11,0:11:20.65:374,21,0	1/1:28,0:28:78.05:1492,78,0	1/1:19,0:19:51.07:968,51,0	1/1:32,0:32:9.03:229,9,0	1/1:18,0:23:65.18:1220,65,0	1/1:26,0:26:66.21:1298,66,0	1/1:30,0:30:81.19:1324,81,0	1/1:18,0:18:6.13:757,6,0	1/1:12,0:12:27:560,27,0	1/1:7,19:26:52.69:690,53,0	1/1:33,0:33:74.47:1069,74,0	1/1:14,0:14:35.97:707,36,0	0/1:13,0:13:8.54:28,0,9	1/1:29,0:29:56.13:876,56,0	0/0:19,0:19:4.92:0,5,411	0/1:24,0:23:82.48:82,0,372	0/0:39,0:39:3.97:0,4,975	0/0:10,0:10:3.84:0,4,104
chr10	19510475	.	C	CAGGCAGGCAGGAAGGA	22444.32	PASS	AB=1.000;AC=42;AF=0.750;AN=56;BaseQRankSum=-1.922;DP=644;FS=5.086;HRun=0;HaplotypeScore=284.6436;InbreedingCoeff=0.4058;MQ=69.23;MQ0=5;MQRankSum=-7.453;QD=39.87;ReadPosRankSum=-4.400;VQSLOD=3.1595;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:27:99:104,0,580	0/0:11,0:11:29.44:0,29,378	0/0:22,0:16:28.73:0,29,576	0/0:19,0:16:27.74:0,28,453	0/0:29,0:29:8.60:0,9,915	1/1:23,0:23:63.18:1638,63,0	1/1:27,0:25:54.17:1237,54,0	1/1:23,0:23:62.77:1143,63,0	0/1:33,0:33:8.17:221,0,8	1/1:16,0:16:44.49:1193,44,0	1/1:10,0:10:24.03:682,24,0	1/1:28,0:28:81.19:2238,81,0	1/1:20,0:20:57.17:1720,57,0	1/1:3,24:32:11.25:624,11,0	1/1:25,0:25:61.40:1280,61,0	1/1:25,0:24:69.18:1923,69,0	1/1:32,0:32:84.20:1792,84,0	1/1:21,0:21:12.21:1053,12,0	1/1:12,0:12:30.09:828,30,0	1/1:22,0:22:57:1017,57,0	1/1:35,0:35:82.52:1249,83,0	1/1:14,0:14:39.09:844,39,0	1/1:0,0:17:6.34:55,6,0	1/1:28,0:28:70.72:1296,71,0	0/1:19,0:19:44.43:44,0,558	0/1:25,0:24:99:222,0,559	0/1:38,0:38:13.78:14,0,1205	0/1:8,0:8:25.77:26,0,199
chr10	19510519	.	A	AAG	4052.20	PASS	AB=0.909;AC=21;AF=0.375;AN=56;BaseQRankSum=6.528;DP=668;FS=15.843;HRun=0;HaplotypeScore=189.3198;InbreedingCoeff=-0.5910;MQ=48.51;MQ0=12;MQRankSum=-1.753;QD=8.68;ReadPosRankSum=-1.439;VQSLOD=2.2406;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:20,4:23:99:143,0,272	0/1:10,0:10:38.58:165,0,39	0/0:49,0:11:26.92:0,27,382	0/0:40,0:14:23.97:0,24,356	0/1:26,0:29:99:125,0,347	0/1:17,6:23:99:289,0,289	0/1:19,5:22:90.32:90,0,242	0/0:19,0:19:53.45:0,53,390	0/1:32,0:32:62.02:62,0,313	0/1:13,0:13:26.34:26,0,160	0/1:13,0:13:5.90:6,0,196	0/1:11,9:20:99:449,0,134	0/1:17,5:22:99:174,0,226	0/0:18,0:18:28.59:0,29,201	0/1:23,1:25:99:130,0,152	0/1:23,7:29:99:368,0,331	0/1:19,8:26:99:329,0,277	0/1:16,3:19:99:205,0,174	0/1:17,0:17:75.89:76,0,239	0/0:26,2:28:55.29:0,55,492	0/0:17,5:22:25.53:0,26,276	0/1:15,4:19:99:181,0,238	0/0:24,0:24:52.49:0,52,374	0/1:22,4:25:99:140,0,276	0/1:19,0:23:99:170,0,243	0/1:23,0:29:99:316,0,320	0/1:26,0:29:99:467,0,228	0/1:8,0:11:99:141,0,114
chr10	19510526	.	A	AAAAAG	8250.88	PASS	AB=0.674;AC=15;AF=0.268;AN=56;BaseQRankSum=7.295;DP=696;FS=14.472;HRun=0;HaplotypeScore=209.9866;InbreedingCoeff=0.8900;MQ=50.45;MQ0=13;MQRankSum=-11.869;QD=41.46;ReadPosRankSum=-0.468;VQSLOD=3.6955;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:14,10:25:51.09:1113,51,0	1/1:4,2:8:12.04:304,12,0	0/0:60,0:15:23.32:0,23,225	0/0:45,0:16:19.72:0,20,339	1/1:13,13:30:56.01:1316,56,0	0/0:19,0:19:45.11:0,45,800	0/0:23,0:21:45.12:0,45,730	0/0:20,0:19:42.11:0,42,635	0/0:30,0:30:60.08:0,60,908	0/0:16,0:16:36.06:0,36,573	0/0:15,0:15:30.09:0,30,519	0/0:19,0:19:27.08:0,27,483	0/0:19,0:20:36.45:0,36,624	0/0:20,0:20:33.07:0,33,493	1/1:8,20:30:9.03:255,9,0	0/0:26,0:26:60.14:0,60,945	0/0:28,0:27:33.97:0,34,594	0/0:20,0:20:36.10:0,36,588	0/0:17,0:17:27.09:0,27,491	0/0:29,0:29:69.18:0,69,1131	0/0:19,0:19:48.05:0,48,762	0/0:19,0:19:47.42:0,47,814	0/0:26,0:26:56.67:0,57,895	0/0:26,0:25:48.14:0,48,839	1/1:13,13:27:57.19:1400,57,0	0/1:16,13:31:44.50:1479,0,44	1/1:17,13:35:75.17:1785,75,0	1/1:3,7:10:21.07:599,21,0
chr10	19510574	.	C	CCCAAA	12115.72	PASS	AB=0.564;AC=13;AF=0.232;AN=56;BaseQRankSum=0.680;DP=648;FS=2.953;HRun=0;HaplotypeScore=142.9915;InbreedingCoeff=0.8992;MQ=70.43;MQ0=1;MQRankSum=-11.977;QD=72.55;ReadPosRankSum=-1.000;VQSLOD=6.2234;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,21:24:60.08:1492,60,0	1/1:1,6:9:27.09:810,27,0	0/0:15,0:13:33.08:0,33,594	0/0:17,0:14:33.11:0,33,676	1/1:5,23:28:75.08:1832,75,0	0/0:25,0:25:60.09:0,60,1059	0/0:18,0:17:48.10:0,48,909	0/0:16,0:16:42.13:0,42,796	0/0:29,0:29:81.28:0,81,1697	0/0:26,0:26:78.26:0,78,1615	0/0:21,0:21:63.20:0,63,1302	0/0:17,0:17:51.18:0,51,1087	0/0:19,0:19:57.20:0,57,1214	0/0:25,0:25:72.25:0,72,1529	0/0:29,0:29:27.09:0,27,561	0/0:29,0:29:84.27:0,84,1734	0/0:29,0:29:84.24:0,84,1680	0/0:17,0:17:45.13:0,45,918	0/0:22,0:22:60.19:0,60,1240	0/0:32,0:32:93.32:0,93,1966	0/0:21,0:21:60.19:0,60,1223	0/0:18,0:18:54.17:0,54,1111	0/0:28,0:28:81.26:0,81,1673	0/0:28,0:28:69.24:0,69,1466	1/1:6,24:30:87.17:2374,87,0	0/1:7,23:31:33.73:2417,0,34	1/1:8,24:35:87.22:2494,87,0	1/1:2,7:9:27.02:698,27,0
chr10	19512545	.	AT	A	9802.19	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-7.454;DP=649;FS=12.628;HRun=8;HaplotypeScore=78.8334;InbreedingCoeff=0.9959;MQ=68.57;MQ0=1;MQRankSum=0.213;QD=24.14;ReadPosRankSum=0.389;VQSLOD=4.5191;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,105,1198	0/0:13,0:13:39.12:0,39,471	0/0:19,0:14:19.66:0,20,345	0/0:17,0:14:26.87:0,27,261	0/0:35,0:35:96.29:0,96,1159	1/1:3,22:25:63.10:608,63,0	1/1:1,7:8:15.02:145,15,0	1/1:3,22:25:66.06:624,66,0	1/1:2,20:22:39.73:530,40,0	1/1:3,29:32:90.13:864,90,0	1/1:1,25:25:60.09:579,60,0	1/1:3,17:20:48.07:464,48,0	1/1:1,21:22:60.09:579,60,0	1/1:2,19:21:34.32:447,34,0	0/0:19,0:19:51.13:0,51,594	1/1:1,14:15:39.06:377,39,0	1/1:1,27:28:75.12:724,75,0	1/1:2,20:22:51.08:492,51,0	1/1:7,22:28:66.04:618,66,0	1/1:4,35:39:99:984,102,0	1/1:0,11:11:30.05:290,30,0	1/1:1,23:24:69.11:666,69,0	1/1:1,19:20:51.08:493,51,0	1/1:2,15:17:33.05:319,33,0	0/0:33,0:33:99:0,99,1172	0/0:17,0:17:42.13:0,42,507	0/0:43,0:42:99:0,126,1520	0/0:7,0:7:21.06:0,21,254
chr10	19514230	.	G	GGTTTT	5090.21	PASS	AB=0.956;AC=36;AF=0.643;AN=56;BaseQRankSum=3.552;DP=545;FS=5.571;HRun=0;HaplotypeScore=112.6120;InbreedingCoeff=0.6264;MQ=50.00;MQ0=39;MQRankSum=-3.320;QD=13.05;ReadPosRankSum=-2.819;VQSLOD=3.2150;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:27:15.47:0,15,378	0/0:6,0:6:15.03:0,15,221	0/0:9,0:7:14.24:0,14,342	0/0:17,0:10:11.18:0,11,173	0/0:32,0:31:4.09:0,4,594	1/1:3,2:27:6.41:175,6,0	1/1:16,0:10:14.34:127,14,0	1/1:9,0:26:46.18:450,46,0	0/1:16,0:15:82.82:112,0,83	1/1:7,14:25:53.03:677,53,0	1/1:7,17:28:47.35:624,47,0	1/1:9,0:23:12.38:127,12,0	1/1:6,0:23:23.04:210,23,0	1/1:8,0:8:9.48:47,9,0	1/1:16,0:15:11.28:65,11,0	1/1:6,3:8:14.99:226,15,0	1/1:27,0:18:26.13:268,26,0	0/1:14,0:9:9.75:74,0,10	1/1:14,0:11:32.82:326,33,0	1/1:14,0:23:52.97:700,53,0	0/1:5,0:5:0:0,0,0	1/1:4,0:10:7.46:164,7,0	1/1:20,0:20:39.98:532,40,0	1/1:8,0:6:14.81:153,15,0	0/0:19,0:18:1.79:0,2,253	0/1:30,0:30:31.94:32,0,599	0/0:25,0:23:49.69:0,50,800	0/0:13,0:8:18.02:0,18,273
chr10	19515833	.	G	GC	2233.81	PASS	AB=0.529;AC=15;AF=0.268;AN=56;BaseQRankSum=-8.608;DP=513;FS=13.114;HRun=9;HaplotypeScore=66.5166;InbreedingCoeff=0.7904;MQ=85.63;MQ0=0;MQRankSum=-0.577;QD=18.62;ReadPosRankSum=1.258;VQSLOD=2.9773;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,18:26:27.83:500,28,0	1/1:4,5:9:6.02:66,6,0	0/0:23,0:22:13:0,13,237	0/0:24,0:23:8.39:0,8,185	1/1:5,10:15:0.74:239,1,0	0/0:19,0:18:44.98:0,45,389	0/0:21,0:21:47.97:0,48,417	0/0:31,1:32:53.84:0,54,450	1/1:4,19:23:25.08:505,25,0	0/0:18,0:18:41.98:0,42,364	0/0:13,0:13:29.97:0,30,257	0/0:24,0:24:62.98:0,63,547	0/0:21,1:22:13.06:0,13,334	0/0:22,0:22:56.95:0,57,486	0/0:17,0:17:50.97:0,51,439	0/0:13,0:13:29.99:0,30,260	0/0:18,0:18:38.97:0,39,339	0/0:29,0:30:73.99:0,74,625	0/0:16,0:16:35.99:0,36,312	0/0:16,0:16:35.97:0,36,312	0/0:23,0:23:53.96:0,54,464	0/0:16,0:16:44.99:0,45,390	0/0:8,0:9:18.76:0,19,178	0/0:15,0:16:43.98:0,44,363	1/1:1,8:9:4.64:243,5,0	0/1:2,16:18:4.50:393,0,4	1/1:2,16:18:39.11:431,39,0	1/1:1,1:2:3.01:33,3,0
chr10	19524435	.	GT	G	11059.72	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-1.795;DP=629;FS=19.487;HRun=11;HaplotypeScore=86.6238;InbreedingCoeff=0.9694;MQ=69.06;MQ0=1;MQRankSum=-3.686;QD=19.93;ReadPosRankSum=2.609;VQSLOD=4.1598;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,36:39:99:886,108,0	1/1:3,15:18:44.90:369,45,0	0/0:23,1:16:8.35:0,8,267	0/0:10,1:10:20.98:0,21,208	1/1:5,30:35:89.87:738,90,0	1/1:5,24:29:39.93:535,40,0	1/1:4,13:17:35.94:296,36,0	1/1:12,24:36:46.14:533,46,0	0/0:10,0:21:45.97:0,46,258	1/1:2,23:25:65.91:542,66,0	1/1:6,20:26:56.90:468,57,0	1/1:1,13:14:38.95:319,39,0	1/1:1,15:16:41.48:344,41,0	1/1:2,9:12:26.34:205,26,0	0/0:18,0:18:42.08:0,42,433	1/1:2,12:15:15.57:207,16,0	1/1:1,17:18:47.94:394,48,0	1/1:0,9:9:26.97:222,27,0	1/1:3,6:10:19.99:150,20,0	1/1:5,35:40:95.85:788,96,0	1/1:2,6:8:14.98:123,15,0	1/1:1,17:18:50.94:419,51,0	1/1:10,33:44:99:818,101,0	1/1:1,21:22:59.93:493,60,0	1/1:3,25:28:74.91:615,75,0	1/1:2,19:21:56.85:463,57,0	1/1:7,33:40:98.79:812,99,0	1/1:2,13:15:38.93:320,39,0
chr10	19526035	.	C	CT	144.05	PASS	AB=0.890;AC=4;AF=0.071;AN=56;BaseQRankSum=-3.661;DP=550;FS=1.154;HRun=8;HaplotypeScore=50.0898;InbreedingCoeff=0.5093;MQ=74.24;MQ0=0;MQRankSum=-0.616;QD=4.24;ReadPosRankSum=-0.275;VQSLOD=-0.5913;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:96.03:0,96,870	0/0:7,0:7:21.01:0,21,192	0/0:13,0:12:26.96:0,27,239	0/0:17,0:17:12.70:0,13,179	0/0:27,0:27:75.02:0,75,679	0/0:23,0:23:63.03:0,63,576	0/0:16,0:16:42.02:0,42,384	0/0:34,0:34:72.01:0,72,657	0/0:16,0:16:48.03:0,48,439	0/0:28,0:28:78.04:0,78,714	0/0:34,0:34:96.04:0,96,875	0/0:15,0:15:45.01:0,45,407	0/0:11,0:11:30.02:0,30,275	0/0:15,0:15:38.98:0,39,343	1/1:2,7:9:18.05:208,18,0	0/0:15,0:16:38.03:0,38,331	0/0:20,0:20:53.96:0,54,475	0/1:9,2:11:39.22:39,0,189	0/1:13,1:14:1.62:2,0,239	0/0:17,0:16:45.02:0,45,412	0/0:15,0:15:45.02:0,45,408	0/0:15,0:15:39.02:0,39,357	0/0:25,0:25:72.01:0,72,648	0/0:21,0:21:60.01:0,60,544	0/0:18,0:18:51.02:0,51,467	0/0:28,0:28:63.02:0,63,576	0/0:28,0:28:72.02:0,72,652	0/0:21,0:21:60.03:0,60,549
chr10	19526852	.	AG	A	19346.36	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-1.523;DP=729;FS=0.639;HRun=6;HaplotypeScore=79.7692;InbreedingCoeff=0.9993;MQ=85.07;MQ0=0;MQRankSum=-10.087;QD=28.24;ReadPosRankSum=6.049;VQSLOD=4.8758;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,34:37:87.22:935,87,0	1/1:0,12:12:36.09:387,36,0	0/0:17,0:17:36.10:0,36,452	0/0:27,0:27:71.66:0,72,860	1/1:0,26:26:72.18:773,72,0	1/1:2,17:19:45.11:484,45,0	1/1:4,28:32:81.20:871,81,0	1/1:0,24:24:66.17:710,66,0	1/1:2,29:31:87.22:935,87,0	1/1:5,33:38:93.21:991,93,0	1/1:1,25:26:69.17:742,69,0	1/1:2,24:26:69.17:742,69,0	1/1:1,20:21:48.12:516,48,0	1/1:2,25:27:69.17:742,69,0	1/1:1,35:36:96.24:1032,96,0	1/1:0,18:18:42.11:451,42,0	1/1:5,33:38:96.23:1032,96,0	1/1:0,15:15:45.11:484,45,0	1/1:3,19:22:57.12:601,57,0	1/1:1,28:29:75.19:805,75,0	1/1:1,31:32:90.23:967,90,0	1/1:4,30:34:90.22:967,90,0	1/1:2,26:28:78.20:838,78,0	1/1:1,16:17:45.11:484,45,0	1/1:0,27:27:69.17:742,69,0	1/1:3,35:38:99:1118,105,0	1/1:1,22:23:66.16:709,66,0	1/1:0,9:9:27.07:290,27,0
chr10	19527398	.	GT	G	3452.73	PASS	AB=0.903;AC=20;AF=0.357;AN=56;BaseQRankSum=11.150;DP=629;FS=22.664;HRun=11;HaplotypeScore=79.6524;InbreedingCoeff=0.7875;MQ=74.97;MQ0=0;MQRankSum=-1.153;QD=13.65;ReadPosRankSum=2.644;VQSLOD=2.1243;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,20:25:50.90:419,51,0	1/1:2,10:13:25.98:203,26,0	0/0:15,0:14:19.60:0,20,241	0/1:14,2:16:9.46:9,0,175	1/1:4,15:19:39.63:341,40,0	0/0:24,1:25:44.53:0,45,679	0/0:23,1:24:43.04:0,43,634	0/0:29,2:31:31.91:0,32,744	1/1:2,19:23:60.98:480,61,0	0/0:17,0:18:41.94:0,42,430	0/0:14,0:14:36.08:0,36,377	0/0:19,1:20:29.50:0,29,513	0/0:22,1:23:35.50:0,35,576	0/0:14,1:15:17.44:0,17,378	1/1:2,0:29:44.81:129,45,0	0/0:18,1:19:23.48:0,23,455	0/0:19,2:22:1.51:0,2,399	0/0:25,2:27:22.90:0,23,646	0/1:19,2:22:7.34:7,0,309	0/0:26,3:28:23.21:0,23,653	0/0:22,2:24:5.73:0,6,458	0/0:18,1:19:20.45:0,20,414	0/0:16,0:18:47.94:0,48,486	0/0:33,0:33:83.01:0,83,861	1/1:7,13:21:3.38:221,3,0	1/1:5,26:31:74.84:609,75,0	1/1:7,25:32:65.88:542,66,0	1/1:1,21:22:59.92:492,60,0
chr10	19527934	.	G	GAA	418.14	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=-3.052;DP=595;FS=11.406;HRun=10;HaplotypeScore=83.3102;InbreedingCoeff=0.6375;MQ=70.68;MQ0=0;MQRankSum=-0.676;QD=14.93;ReadPosRankSum=-0.019;VQSLOD=0.8887;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:40:99:0,105,1049	0/0:12,0:12:33.05:0,33,335	0/0:8,0:8:14.05:0,14,126	0/1:10,0:10:23:23,0,55	0/0:31,0:31:84.12:0,84,848	0/0:16,0:16:44.77:0,45,439	0/0:11,0:12:26.76:0,27,249	0/0:29,0:29:78.13:0,78,777	0/0:20,0:20:60.13:0,60,610	0/0:19,0:21:41.52:0,42,390	0/0:27,0:27:75.11:0,75,749	0/0:14,0:14:30.90:0,31,307	0/0:17,0:18:32.78:0,33,388	0/0:14,0:14:39.05:0,39,390	1/1:3,14:18:35.61:501,36,0	0/0:21,0:21:25.32:0,25,462	0/0:12,0:12:27.05:0,27,274	0/0:29,0:32:86.38:0,86,829	0/0:24,0:24:53.98:0,54,544	0/0:31,0:31:75.14:0,75,756	0/0:13,0:13:33.07:0,33,336	0/0:25,0:25:63.11:0,63,634	0/0:19,0:19:51.08:0,51,512	0/0:25,0:26:65.83:0,66,645	0/0:21,0:21:57.10:0,57,573	0/0:26,0:27:71.89:0,72,713	0/0:34,0:33:87.11:0,87,877	0/0:20,0:20:35.98:0,36,366
chr10	19537357	.	GA	G	1568.61	PASS	AC=38;AF=1.000;AN=38;DP=83;FS=0.000;HRun=2;HaplotypeScore=9.7212;InbreedingCoeff=-0.1162;MQ=26.08;MQ0=14;QD=21.49;VQSLOD=3.3082;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,7:7:9.03:116,9,0	./.	./.	./.	1/1:0,5:5:6.02:77,6,0	1/1:0,2:2:3.01:39,3,0	1/1:0,2:2:5.97:57,6,0	1/1:1,10:10:30.02:350,30,0	1/1:0,2:2:3.01:38,3,0	./.	./.	./.	1/1:1,0:1:2.97:20,3,0	1/1:0,1:1:3.01:39,3,0	1/1:0,3:3:6.02:77,6,0	./.	1/1:1,1:2:5.98:58,6,0	1/1:0,1:1:3.01:39,3,0	1/1:3,1:1:3.01:39,3,0	1/1:0,9:9:24.08:309,24,0	./.	1/1:1,0:1:2.94:18,3,0	1/1:1,2:2:2.94:18,3,0	./.	1/1:0,2:2:3.01:39,3,0	1/1:1,3:3:9.03:116,9,0	1/1:0,3:3:6.02:77,6,0	1/1:1,6:6:9.03:115,9,0
chr10	19537424	.	TA	T	1754	PASS	AB=0.866;AC=39;AF=0.780;AN=50;BaseQRankSum=5.547;DP=220;FS=5.798;HRun=12;HaplotypeScore=28.9287;InbreedingCoeff=0.5873;MQ=42.41;MQ0=13;MQRankSum=-3.858;QD=10.38;ReadPosRankSum=-0.169;VQSLOD=1.5655;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:9:15.03:0,15,152	0/0:7,0:8:23.84:0,24,217	./.	./.	0/1:5,2:7:31.03:31,0,69	1/1:3,3:6:8.94:70,9,0	1/1:3,8:9:20.92:162,21,0	1/1:4,6:10:16.94:122,17,0	1/1:0,0:4:6.11:18,6,0	1/1:2,10:12:31.12:232,31,0	1/1:4,4:8:11.95:93,12,0	1/1:0,2:2:5.98:46,6,0	1/1:0,2:2:5.98:46,6,0	1/1:1,5:5:11.94:93,12,0	1/1:3,0:8:11.74:33,12,0	1/1:0,5:5:14.94:116,15,0	1/1:1,8:9:20.92:162,21,0	1/1:1,2:2:5.98:46,6,0	1/1:3,5:8:14.88:108,15,0	1/1:1,9:11:23.90:184,24,0	./.	1/1:1,7:8:17.92:139,18,0	1/1:4,12:14:23.91:185,24,0	1/1:2,4:4:2.98:23,3,0	0/1:5,1:7:5.40:5,0,104	0/1:16,1:16:2.23:2,0,290	0/0:8,0:7:21.04:0,21,211	0/0:14,0:12:27.05:0,27,271
chr10	19537689	.	GCACA	G	2226.98	PASS	AB=1.000;AC=22;AF=0.423;AN=52;BaseQRankSum=-8.317;DP=387;FS=42.975;HRun=0;HaplotypeScore=118.9215;InbreedingCoeff=0.3533;MQ=55.13;MQ0=11;MQRankSum=5.519;QD=9.24;ReadPosRankSum=4.876;VQSLOD=1.1330;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:18,19:38:23.29:338,23,0	1/1:4,6:10:9.03:142,9,0	./.	./.	1/1:7,8:17:14.84:236,15,0	0/1:12,0:12:36.21:36,0,47	1/1:15,0:15:2.81:33,3,0	0/1:18,0:17:33.16:33,0,68	0/0:14,0:13:8.80:0,9,130	0/1:13,0:12:16.81:17,0,93	0/0:12,0:11:6.11:0,6,18	0/0:11,0:10:11.41:0,11,114	0/1:14,0:14:21.15:21,0,123	0/0:18,0:18:18.24:0,18,129	0/0:11,0:12:11.83:0,12,212	0/0:4,0:4:5.95:0,6,49	0/1:10,0:10:5.97:6,0,58	0/1:8,0:8:61.16:61,0,81	0/0:11,0:11:3.01:0,3,30	0/0:5,0:5:3.01:0,3,32	0/0:10,0:9:2.94:0,3,18	0/0:11,0:11:10.90:0,11,92	0/0:9,0:9:8.83:0,9,53	0/0:8,0:8:8.56:0,9,46	1/1:9,11:20:18.38:314,18,0	1/1:20,15:36:44.40:606,44,0	1/1:4,6:11:11.64:164,12,0	1/1:7,10:19:27.08:397,27,0
chr10	19539307	.	T	TC	4432.31	PASS	AB=0.587;AC=33;AF=0.589;AN=56;BaseQRankSum=-5.294;DP=388;FS=0.504;HRun=8;HaplotypeScore=52.8004;InbreedingCoeff=0.7856;MQ=65.04;MQ0=2;MQRankSum=-1.654;QD=17.59;ReadPosRankSum=0.371;VQSLOD=4.4941;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,1:28:19.42:0,19,432	0/0:6,0:6:12:0,12,110	0/0:14,0:13:35.23:0,35,275	0/0:14,0:11:20.28:0,20,191	0/0:5,0:5:12:0,12,110	1/1:2,6:8:15.04:173,15,0	1/1:8,13:20:24.07:276,24,0	1/1:7,4:11:15.04:165,15,0	0/1:4,10:14:0.15:227,0,0	1/1:4,10:14:30.07:335,30,0	1/1:1,2:3:6.02:69,6,0	1/1:4,10:14:15:158,15,0	1/1:5,9:14:12.04:138,12,0	1/1:3,15:17:33.10:381,33,0	0/0:21,0:21:29.98:0,30,274	1/1:2,11:13:24.07:277,24,0	1/1:1,13:14:21.06:242,21,0	0/1:4,8:11:9.41:155,0,9	0/1:3,7:11:3.57:197,0,4	1/1:2,8:10:24.07:277,24,0	1/1:3,41:44:41.74:734,42,0	1/1:0,11:11:21.02:228,21,0	1/1:2,1:3:5.98:55,6,0	1/1:2,15:17:30.09:345,30,0	0/0:14,0:14:30.01:0,30,274	0/0:13,0:13:36.02:0,36,329	0/0:13,0:13:27.01:0,27,247	0/0:8,0:8:12:0,12,110
chr10	19539359	.	A	ATG	3435.47	PASS	AB=0.952;AC=39;AF=0.696;AN=56;BaseQRankSum=-1.011;DP=467;FS=3.600;HRun=0;HaplotypeScore=121.8336;InbreedingCoeff=0.5898;MQ=41.35;MQ0=10;MQRankSum=0.122;QD=11.08;ReadPosRankSum=1.171;VQSLOD=3.3626;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:32.97:0,33,411	0/0:10,0:10:5.78:0,6,71	0/0:37,0:20:27.88:0,28,297	0/0:35,0:16:26.81:0,27,322	0/0:22,0:22:11.95:0,12,137	1/1:7,5:11:0.94:2,1,0	1/1:7,4:11:11.88:184,12,0	1/1:8,11:17:35.40:527,35,0	1/1:10,10:20:20.09:285,20,0	1/1:12,10:20:35.34:567,35,0	1/1:4,5:9:3.01:50,3,0	1/1:9,3:12:5.27:105,5,0	1/1:7,10:17:4.50:230,4,0	1/1:14,8:22:9.97:147,10,0	1/1:12,7:18:0.55:136,1,0	1/1:12,7:19:3.95:52,4,0	1/1:2,9:10:9.03:148,9,0	1/1:3,4:6:9:120,9,0	1/1:15,0:14:4.77:53,5,0	1/1:6,9:15:12.04:195,12,0	1/1:10,15:24:27.09:446,27,0	1/1:6,5:11:3.90:51,4,0	1/1:9,4:13:4.26:52,4,0	1/1:7,4:11:6.45:71,6,0	0/0:12,0:12:5.51:0,6,71	0/1:19,1:19:14.51:15,0,302	0/0:9,0:9:20.38:0,20,203	0/0:6,0:6:0.88:0,1,40
chr10	19539363	.	G	GTA	1582.57	PASS	AB=0.969;AC=29;AF=0.518;AN=56;BaseQRankSum=4.218;DP=456;FS=5.081;HRun=0;HaplotypeScore=120.5026;InbreedingCoeff=0.2755;MQ=40.08;MQ0=12;MQRankSum=0.858;QD=5.55;ReadPosRankSum=3.738;VQSLOD=2.6518;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:32.64:0,33,501	0/0:10,0:10:11.30:0,11,134	0/0:38,0:16:47.84:0,48,596	0/0:32,0:15:32.31:0,32,460	0/0:24,0:24:12.80:0,13,199	1/1:11,1:11:1.41:3,1,0	1/1:9,0:9:12.48:114,12,0	0/1:18,0:16:1.13:272,0,1	1/1:20,0:20:20.60:151,21,0	0/1:23,0:20:1.13:282,0,1	1/1:9,0:9:3.47:26,3,0	0/1:10,2:12:9.35:80,0,9	0/1:16,1:17:14.37:123,0,14	0/1:20,2:22:9.57:62,0,10	0/1:19,0:18:28.21:67,0,28	1/1:18,0:18:5.35:29,5,0	1/1:10,0:9:9.48:85,9,0	1/1:6,0:5:5.42:55,5,0	0/0:16,0:15:2.85:0,3,157	1/1:15,0:15:12.93:103,13,0	0/1:23,0:22:13.50:207,0,13	1/1:8,0:9:5.30:29,5,0	0/1:13,0:13:3.52:20,0,4	1/1:8,2:10:0.99:23,1,0	0/0:11,0:11:8.39:0,8,115	0/1:20,0:19:27.11:27,0,441	0/0:9,0:9:20.85:0,21,284	0/0:6,0:6:13.49:0,13,96
chr10	19539393	.	A	ATCTG	2000.12	PASS	AB=0.806;AC=38;AF=0.704;AN=54;BaseQRankSum=-0.169;DP=280;FS=0.000;HRun=0;HaplotypeScore=87.9876;InbreedingCoeff=0.0812;MQ=31.63;MQ0=9;MQRankSum=1.447;QD=8.85;ReadPosRankSum=-3.694;VQSLOD=1.4224;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,5:12:9.34:112,9,0	1/1:5,2:7:0.31:0,0,0	0/0:22,0:3:8.97:0,9,107	0/0:16,0:5:14.96:0,15,231	1/1:9,6:15:5.44:73,5,0	1/1:5,3:8:1.20:2,1,0	1/1:4,1:6:5.88:99,6,0	0/1:12,0:10:22.44:184,0,22	1/1:6,4:11:6.47:73,6,0	0/1:10,3:12:39.25:349,0,39	0/0:3,2:5:0:0,0,0	0/0:7,1:8:1.03:0,1,11	0/1:8,6:14:21.36:37,0,21	1/1:7,4:12:7.78:77,8,0	0/1:7,4:12:4.32:77,0,4	1/1:8,5:13:4.21:28,4,0	1/1:4,3:6:8.86:145,9,0	1/1:2,1:2:3.01:82,3,0	0/1:8,0:7:10.33:10,0,83	1/1:5,5:10:2.72:25,3,0	1/1:8,4:11:6.39:41,6,0	0/1:3,2:5:0.01:0,0,0	1/1:6,5:11:2.74:25,3,0	1/1:6,1:7:3.88:26,4,0	1/1:7,1:8:3.81:41,4,0	0/1:8,5:12:2.87:560,0,3	0/1:4,2:6:70.53:71,0,71	./.
chr10	19542217	.	A	AG	621.02	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-3.451;DP=517;FS=1.950;HRun=1;HaplotypeScore=50.4655;InbreedingCoeff=0.9946;MQ=77.59;MQ0=0;MQRankSum=-0.038;QD=36.53;ReadPosRankSum=0.299;VQSLOD=3.5696;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:96.27:0,96,1211	0/0:12,0:12:33.11:0,33,426	0/0:13,0:13:27.47:0,27,331	0/0:11,0:11:28.71:0,29,241	0/0:28,0:28:84.23:0,84,1033	0/0:24,0:24:66.20:0,66,839	0/0:13,0:13:36.10:0,36,452	0/0:36,0:36:99:0,99,1177	0/0:13,0:13:35.99:0,36,391	0/0:21,0:21:60.18:0,60,757	0/0:20,0:20:54.12:0,54,665	0/0:9,0:9:27.07:0,27,323	0/0:12,0:12:36.11:0,36,453	0/0:12,0:12:36.09:0,36,438	1/1:0,17:17:48.16:716,48,0	0/0:10,0:10:27.09:0,27,350	0/0:25,0:24:72.18:0,72,886	0/0:16,0:16:45.12:0,45,562	0/0:22,0:22:66.17:0,66,787	0/0:28,0:28:75.22:0,75,941	0/0:11,0:11:33.09:0,33,400	0/0:12,0:12:30.09:0,30,377	0/0:18,0:18:51.17:0,51,658	0/0:11,0:11:33.10:0,33,413	0/0:23,0:23:63.18:0,63,780	0/0:19,0:19:57.16:0,57,702	0/0:28,0:28:72.45:0,72,935	0/0:20,0:20:60.20:0,60,777
chr10	19542397	.	G	GA	5874.31	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-4.663;DP=574;FS=2.036;HRun=5;HaplotypeScore=84.1241;InbreedingCoeff=0.9957;MQ=61.25;MQ0=0;MQRankSum=0.271;QD=34.55;ReadPosRankSum=3.479;VQSLOD=5.0344;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,52:54:99:1872,144,0	1/1:2,8:10:21.07:276,21,0	0/0:18,0:15:21.22:0,21,331	0/0:22,0:22:54.13:0,54,569	1/1:3,16:19:45.10:572,45,0	0/0:13,0:13:36.09:0,36,387	0/0:23,0:23:60.12:0,60,636	0/0:22,0:22:60.15:0,60,645	1/1:1,15:16:42.14:553,42,0	0/0:18,0:18:51.09:0,51,536	0/0:8,0:8:15.04:0,15,160	0/0:21,0:21:60.13:0,60,635	0/0:14,0:14:36.07:0,36,376	0/0:24,0:24:66.14:0,66,700	0/0:32,0:32:87.21:0,87,934	0/0:15,0:15:45.11:0,45,484	0/0:18,0:18:51.13:0,51,548	0/0:30,0:30:87.17:0,87,916	0/0:19,0:19:45.06:0,45,463	0/0:17,0:17:48.12:0,48,516	0/0:27,0:27:72.18:0,72,774	0/0:12,0:12:27.07:0,27,290	0/0:16,0:16:39.09:0,39,419	0/0:34,0:34:93.23:0,93,999	1/1:1,21:22:63.20:829,63,0	1/1:0,17:17:48.16:632,48,0	1/1:1,20:21:54.15:707,54,0	1/1:0,11:11:33.11:434,33,0
chr10	19542623	.	G	GACAGACAGACAGACAGACAA	24674.59	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=6.334;DP=763;FS=9.277;HRun=0;HaplotypeScore=272.7385;InbreedingCoeff=0.9239;MQ=62.36;MQ0=1;MQRankSum=-12.960;QD=53.29;ReadPosRankSum=-4.145;VQSLOD=2.3235;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:79.12:0,79,3466	0/0:14,0:14:42.13:0,42,1616	0/0:29,0:28:81.22:0,81,2704	0/0:27,0:24:62.98:0,63,2009	0/0:37,0:37:99:0,99,4976	1/1:0,8:15:12.04:1143,12,0	1/1:34,0:34:75.28:1695,75,0	1/1:20,0:18:51.16:1009,51,0	0/0:38,0:38:99:0,111,5049	1/1:0,10:38:86.54:3840,87,0	1/1:2,12:27:7.50:322,8,0	1/1:2,13:34:12.04:908,12,0	1/1:0,12:28:15.05:1425,15,0	1/1:0,21:48:23.82:2207,24,0	0/0:34,0:34:96.30:0,96,4643	1/1:0,18:38:29.03:2855,29,0	1/1:0,8:19:5.98:306,6,0	1/1:1,8:18:12.04:1146,12,0	1/1:0,13:27:81.18:3608,81,0	1/1:0,8:23:12.01:803,12,0	1/1:24,0:24:38.61:1045,39,0	1/1:1,16:31:24:1751,24,0	1/1:0,8:20:6.02:572,6,0	1/1:0,10:18:5.93:40,6,0	0/0:11,0:11:33.10:0,33,1553	0/0:31,0:31:32.51:0,33,4257	0/0:25,0:25:73.44:0,73,2735	0/0:20,0:20:60.21:0,60,2311
chr10	19543311	.	C	CA	1281.07	PASS	AB=1.000;AC=25;AF=0.625;AN=40;BaseQRankSum=-0.716;DP=168;FS=5.315;HRun=0;HaplotypeScore=18.9365;InbreedingCoeff=0.5050;MQ=38.45;MQ0=71;MQRankSum=-0.887;QD=12.81;ReadPosRankSum=-1.648;VQSLOD=2.6276;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:8,0:2:35.87:38,0,36	./.	./.	./.	0/0:3,0:1:3.01:0,3,42	1/1:1,4:4:2.88:48,3,0	1/1:10,1:4:12.04:192,12,0	./.	0/0:23,0:15:39.13:0,39,545	1/1:4,2:2:6.02:96,6,0	./.	1/1:2,6:6:3.01:48,3,0	1/1:0,2:2:3.01:47,3,0	1/1:3,0:2:6.02:96,6,0	0/0:13,0:9:27.09:0,27,378	./.	1/1:9,6:6:1.78:46,2,0	1/1:4,7:7:21.07:312,21,0	./.	1/1:0,4:4:3.01:48,3,0	1/1:6,4:5:12.02:166,12,0	./.	1/1:4,0:1:3.01:48,3,0	1/1:3,10:10:15.99:241,16,0	0/0:3,0:1:3:0,3,26	0/0:6,0:1:3.01:0,3,42	0/0:5,0:4:12.04:0,12,167	0/0:7,0:3:9.03:0,9,126
chr10	19543323	.	C	CA	956.36	PASS	AC=18;AF=0.529;AN=34;BaseQRankSum=-1.210;DP=169;FS=12.122;HRun=0;HaplotypeScore=26.6753;InbreedingCoeff=0.6299;MQ=37.39;MQ0=71;MQRankSum=-1.628;QD=10.99;ReadPosRankSum=-3.960;VQSLOD=0.9890;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:3:6.02:0,6,84	0/0:2,0:1:3.01:0,3,42	./.	./.	0/0:4,0:1:3.01:0,3,42	./.	1/1:8,3:3:6.02:96,6,0	./.	0/0:21,0:13:33.11:0,33,462	./.	./.	1/1:2,9:9:18.06:287,18,0	1/1:0,9:9:9.03:144,9,0	1/1:1,6:6:5.94:41,6,0	0/0:13,0:9:27.09:0,27,378	1/1:0,5:5:3.01:48,3,0	1/1:9,4:4:9.03:143,9,0	1/1:4,3:4:3.01:48,3,0	./.	./.	1/1:6,7:7:8.96:144,9,0	./.	./.	1/1:3,8:8:8.69:143,9,0	./.	0/0:6,0:1:3.01:0,3,42	0/0:5,0:4:12.04:0,12,168	0/0:6,0:2:3.01:0,3,42
chr10	19543524	.	TATC	T	14447.13	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=13.477;DP=573;FS=30.086;HRun=0;HaplotypeScore=91.3640;InbreedingCoeff=0.9993;MQ=89.84;MQ0=0;MQRankSum=-6.715;QD=40.58;ReadPosRankSum=1.960;VQSLOD=3.2233;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,120,2671	0/0:8,0:8:24.08:0,24,544	0/0:26,0:26:75.19:0,75,1596	0/0:26,0:26:54.36:0,54,1384	0/0:16,0:15:42.14:0,42,951	1/1:2,21:23:57.19:949,57,0	1/1:1,20:20:48.16:798,48,0	1/1:1,22:23:66.21:1071,66,0	0/0:25,0:25:69.24:0,69,1561	1/1:2,15:17:48.14:768,48,0	1/1:0,14:14:36.12:599,36,0	1/1:1,20:21:57.19:948,57,0	1/1:2,17:19:45.15:747,45,0	1/1:0,14:15:39.13:649,39,0	0/0:16,0:16:48.16:0,48,1066	1/1:3,15:18:38.96:649,39,0	1/1:2,22:24:54.18:898,54,0	1/1:4,25:29:63.22:1049,63,0	1/1:2,14:16:42.13:674,42,0	1/1:0,15:15:42.14:699,42,0	1/1:0,37:36:93.32:1548,93,0	1/1:0,20:20:48.16:799,48,0	1/1:1,18:19:51.17:849,51,0	1/1:3,22:25:45.15:750,45,0	0/0:12,0:12:36.12:0,36,772	0/0:21,0:21:63.22:0,63,1428	0/0:15,0:15:45.15:0,45,1014	0/0:9,0:9:24.08:0,24,544
chr10	19544201	.	T	TAACAC	31017.06	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-14.540;DP=754;FS=2.497;HRun=0;HaplotypeScore=125.1098;InbreedingCoeff=0.9990;MQ=83.08;MQ0=0;MQRankSum=-12.101;QD=64.48;ReadPosRankSum=0.853;VQSLOD=5.7251;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,135,2739	0/0:8,0:8:24.08:0,24,497	0/0:20,0:20:38.72:0,39,771	0/0:37,0:37:99:0,99,1815	0/0:19,0:19:57.14:0,57,1101	1/1:3,8:13:27.09:776,27,0	1/1:4,22:29:72.17:1949,72,0	1/1:4,13:18:42.13:1163,42,0	0/0:24,0:24:66.23:0,66,1367	1/1:4,26:32:84.20:2308,84,0	1/1:3,13:16:36.08:972,36,0	1/1:4,22:30:60.15:1782,60,0	1/1:1,27:29:69.10:2042,69,0	1/1:8,21:32:63.17:1785,63,0	0/0:38,0:38:96.32:0,96,1952	1/1:5,30:36:81.23:2413,81,0	1/1:3,29:32:75.26:2302,75,0	1/1:7,23:31:60.21:1842,60,0	1/1:5,15:24:63.10:1601,63,0	1/1:5,20:27:63.17:1754,63,0	1/1:4,34:41:86.89:2158,87,0	1/1:4,16:20:51.60:1436,52,0	1/1:3,19:23:44.86:1233,45,0	1/1:3,43:48:99:3501,114,0	0/0:19,0:19:57.20:0,57,1181	0/0:18,0:18:21.17:0,21,906	0/0:23,0:23:63.22:0,63,1279	0/0:16,0:16:45.15:0,45,932
chr10	19544938	.	CTTG	C	21604.45	PASS	AB=0.905;AC=35;AF=0.625;AN=56;BaseQRankSum=19.710;DP=735;FS=0.000;HRun=0;HaplotypeScore=142.8005;InbreedingCoeff=0.9238;MQ=83.70;MQ0=0;MQRankSum=-7.852;QD=48.01;ReadPosRankSum=3.215;VQSLOD=6.8833;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,123,2981	0/0:18,0:18:54.19:0,54,1331	0/0:23,0:22:65.88:0,66,1478	0/0:26,0:26:77.60:0,78,1612	0/0:39,0:39:99:0,117,2867	1/1:0,24:24:72.24:1284,72,0	1/1:0,24:24:60.20:1093,60,0	1/1:0,35:35:99:1918,105,0	0/0:28,0:28:84.29:0,84,2020	1/1:0,23:23:69.24:1286,69,0	1/1:0,20:20:57.20:1059,57,0	1/1:1,27:28:75.26:1389,75,0	1/1:0,24:24:63.22:1170,63,0	1/1:1,22:23:63.22:1167,63,0	0/0:40,0:40:99:0,120,2946	1/1:0,21:21:60.21:1118,60,0	1/1:0,26:26:69.24:1286,69,0	1/1:0,23:23:54.19:1007,54,0	1/1:0,13:13:39.13:724,39,0	1/1:1,31:32:90.30:1578,90,0	1/1:0,49:49:99:2198,120,0	1/1:0,18:18:51.17:930,51,0	1/1:0,23:24:69.19:1281,69,0	1/1:0,24:24:57.20:1062,57,0	0/0:23,0:23:69.22:0,69,1637	0/1:17,2:19:54.71:55,0,1177	0/0:29,0:29:87.30:0,87,2144	0/0:17,0:17:51.13:0,51,1155
chr10	19545958	.	CA	C	19195.25	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=0.051;DP=617;FS=3.549;HRun=3;HaplotypeScore=77.8530;InbreedingCoeff=0.9977;MQ=88.78;MQ0=1;MQRankSum=-11.248;QD=33.91;ReadPosRankSum=6.473;VQSLOD=4.9289;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,28:28:78.25:967,78,0	1/1:0,17:17:39.09:483,39,0	0/0:17,0:17:47.43:0,47,620	0/0:34,0:33:90.25:0,90,1205	1/1:1,23:24:66.17:818,66,0	1/1:0,15:15:42.13:521,42,0	1/1:0,25:25:72.23:893,72,0	1/1:0,23:23:69.20:843,69,0	1/1:1,23:24:66.20:810,66,0	1/1:0,19:19:54.17:669,54,0	1/1:1,12:13:36.11:441,36,0	1/1:1,23:24:69.22:855,69,0	1/1:1,22:23:63.20:780,63,0	1/1:1,12:13:36.11:446,36,0	1/1:0,24:24:66.21:818,66,0	1/1:0,17:17:45.14:558,45,0	1/1:0,22:22:60.19:744,60,0	1/1:2,21:23:57.18:707,57,0	1/1:2,22:24:66.21:818,66,0	1/1:0,23:23:69.22:855,69,0	1/1:1,30:31:81.25:1004,81,0	1/1:0,25:25:60.19:743,60,0	1/1:0,15:15:42.13:520,42,0	1/1:0,21:21:63.20:781,63,0	1/1:0,17:17:45.14:558,45,0	1/1:0,28:28:78.24:966,78,0	1/1:2,38:40:99:1338,108,0	1/1:0,8:8:21.07:260,21,0
chr10	19547215	.	TGG	T	3646.82	PASS	AB=0.690;AC=19;AF=0.339;AN=56;BaseQRankSum=-11.521;DP=432;FS=1.494;HRun=11;HaplotypeScore=69.3797;InbreedingCoeff=0.8987;MQ=65.38;MQ0=0;MQRankSum=-1.237;QD=20.37;ReadPosRankSum=6.850;VQSLOD=2.6630;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,11:16:33.07:350,33,0	1/1:3,4:7:15.03:160,15,0	0/0:12,0:11:20.90:0,21,284	0/0:8,0:8:16.01:0,16,144	1/1:3,14:17:28.32:315,28,0	0/0:18,0:18:21.04:0,21,280	0/0:16,0:16:35.41:0,35,491	0/0:2,0:14:15.91:0,16,85	1/1:2,13:15:36.08:383,36,0	0/0:18,0:18:26.54:0,27,313	0/0:14,0:15:17.97:0,18,217	0/0:15,0:15:30.08:0,30,411	0/0:12,0:12:30.08:0,30,431	0/0:14,0:14:24.07:0,24,345	1/1:2,20:22:51.12:543,51,0	0/0:13,0:14:38.60:0,39,538	0/0:13,0:13:36.10:0,36,509	0/0:14,0:14:33.07:0,33,449	0/0:4,0:13:19.94:0,20,69	0/1:11,1:20:13.90:14,0,33	0/0:1,0:8:9.96:0,10,34	0/0:14,0:14:12.04:0,12,184	0/0:15,0:17:14.49:0,14,191	0/0:17,0:17:42.14:0,42,630	1/1:3,18:21:42.09:447,42,0	1/1:8,15:23:51.11:542,51,0	1/1:4,20:24:51.12:543,51,0	1/1:2,12:14:33.08:351,33,0
chr10	19548518	.	GT	G	873.34	PASS	AB=0.932;AC=16;AF=0.286;AN=56;BaseQRankSum=3.468;DP=541;FS=0.567;HRun=3;HaplotypeScore=123.0370;InbreedingCoeff=0.7188;MQ=56.52;MQ0=8;MQRankSum=-3.433;QD=6.62;ReadPosRankSum=-1.513;VQSLOD=-0.0672;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:13,1:11:0.23:117,0,0	1/1:2,2:4:8.97:80,9,0	0/0:19,5:13:26.23:0,26,356	0/1:16,3:12:12.28:12,0,342	0/1:17,0:15:12.91:175,0,13	0/0:15,0:15:24.04:0,24,300	0/0:21,0:21:33.11:0,33,448	0/0:27,0:27:63.20:0,63,879	1/1:15,0:13:3.23:86,3,0	0/0:30,0:30:90.26:0,90,1212	0/0:15,0:14:39.13:0,39,521	0/0:16,0:15:24.08:0,24,329	0/0:21,0:21:24.04:0,24,304	0/0:17,0:17:30.10:0,30,406	0/0:20,0:20:57.18:0,57,785	0/0:31,0:31:60.20:0,60,817	0/0:27,0:27:34.92:0,35,477	0/0:20,0:20:30.10:0,30,418	0/0:26,0:23:60.20:0,60,831	0/0:16,0:16:39.12:0,39,522	0/0:19,0:19:27.02:0,27,322	0/0:17,0:17:39.11:0,39,495	0/0:17,0:17:16.13:0,16,176	0/0:30,0:30:33.06:0,33,424	1/1:19,1:20:9.87:94,10,0	1/1:9,0:9:11.32:170,11,0	1/1:26,0:26:26.66:203,27,0	1/1:2,5:6:12.81:115,13,0
chr10	19548519	.	T	TTG	2059.92	PASS	AB=0.642;AC=10;AF=0.179;AN=56;BaseQRankSum=0.054;DP=555;FS=7.860;HRun=0;HaplotypeScore=133.9084;InbreedingCoeff=0.3421;MQ=56.15;MQ0=8;MQRankSum=-2.885;QD=16.48;ReadPosRankSum=-1.478;VQSLOD=2.6399;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,6:16:5.17:304,5,0	1/1:4,1:5:9.03:158,9,0	0/0:23,0:13:24.62:0,25,382	0/0:20,0:13:20.44:0,20,426	0/1:4,11:15:12.42:364,0,12	0/0:14,0:14:24.08:0,24,342	0/0:21,0:21:33.11:0,33,485	0/0:28,0:28:63.20:0,63,915	0/1:3,12:14:23.94:192,0,24	0/0:30,0:30:90.30:0,90,1349	0/0:14,0:13:39.11:0,39,544	0/0:16,0:15:24.08:0,24,361	0/0:22,0:22:24.04:0,24,340	0/0:17,0:17:30.10:0,30,458	0/0:20,0:20:57.18:0,57,836	0/0:31,0:31:60.12:0,60,908	0/0:28,0:28:39.06:0,39,536	0/0:20,0:20:30.10:0,30,450	0/0:26,0:23:60.20:0,60,893	0/0:15,0:15:39.13:0,39,561	0/0:19,0:19:27.03:0,27,350	0/0:18,0:18:39.11:0,39,533	0/0:17,0:17:16.13:0,16,199	0/0:30,0:30:33.07:0,33,458	0/1:8,14:22:25.27:149,0,25	0/1:2,8:11:3.14:383,0,3	0/1:7,20:27:26.24:447,0,26	0/1:7,0:6:1.83:210,0,2
chr10	19548529	.	TG	T	1335.33	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=1.943;DP=550;FS=12.801;HRun=1;HaplotypeScore=124.2594;InbreedingCoeff=0.9446;MQ=56.64;MQ0=8;MQRankSum=-4.589;QD=10.68;ReadPosRankSum=-4.843;VQSLOD=-0.4159;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:23,1:20:44.21:299,44,0	1/1:4,2:6:13.89:94,14,0	0/0:17,0:8:13.53:0,14,186	0/0:20,0:10:14.38:0,14,167	1/1:18,0:16:29.67:227,30,0	0/0:15,0:15:18.51:0,19,70	0/0:20,0:20:16.41:0,16,70	0/0:23,0:23:54.73:0,55,349	1/1:15,0:13:29.34:198,29,0	0/0:31,0:31:62.49:0,62,294	0/0:14,0:13:29.17:0,29,150	0/0:13,0:12:6.74:0,7,16	0/0:22,0:22:11.24:0,11,44	0/0:19,0:19:14.62:0,15,52	0/0:23,0:23:69.14:0,69,810	0/0:32,0:32:37.27:0,37,181	0/0:29,0:29:20.98:0,21,131	0/0:23,0:23:22.04:0,22,120	0/0:31,0:28:62.76:0,63,395	0/0:16,0:16:41.74:0,42,230	0/0:18,0:18:16.05:0,16,107	0/0:15,1:16:15.43:0,15,90	0/0:16,0:16:17.65:0,18,77	0/0:27,0:27:21.48:0,21,125	1/1:19,1:20:37.30:234,37,0	1/1:10,0:10:22.86:157,23,0	1/1:24,1:24:38.15:274,38,0	1/1:6,1:5:8.91:56,9,0
chr10	19548531	.	TTTTTTTG	T	10012.66	PASS	AB=0.852;AC=36;AF=0.643;AN=56;BaseQRankSum=-4.067;DP=547;FS=1.618;HRun=0;HaplotypeScore=131.1143;InbreedingCoeff=0.5181;MQ=57.61;MQ0=8;MQRankSum=0.317;QD=23.84;ReadPosRankSum=2.619;VQSLOD=4.7471;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:21:21.74:22,0,135	0/1:6,0:6:14.24:14,0,25	0/0:16,0:9:6.30:0,6,248	0/0:18,0:9:12.01:0,12,177	0/1:19,0:17:48.37:48,0,184	1/1:2,13:15:24.08:543,24,0	1/1:2,18:20:18.06:434,18,0	1/1:4,18:22:51.15:785,51,0	0/0:15,0:13:14.55:0,15,271	1/1:5,26:31:81.05:1495,81,0	1/1:2,11:12:27.08:516,27,0	1/1:1,12:12:12.04:291,12,0	1/1:2,20:22:15.05:364,15,0	1/1:1,18:19:21.07:509,21,0	0/0:23,0:23:69.21:0,69,1748	1/1:5,28:33:35.64:868,36,0	1/1:3,27:30:24.08:541,24,0	1/1:3,17:20:15.05:266,15,0	1/1:7,23:27:69.19:1056,69,0	1/1:10,6:16:45:737,45,0	0/1:5,13:18:20.59:134,0,21	1/1:1,15:16:42.02:668,42,0	1/1:0,16:16:20.81:319,21,0	0/1:3,23:26:3.84:392,0,4	0/0:20,0:20:14.06:0,14,299	0/1:10,0:10:9.44:9,0,95	0/0:25,0:25:19.64:0,20,487	0/0:7,0:5:9.88:0,10,79
chr10	19548537	.	TG	T	3458.72	PASS	AB=1.000;AC=47;AF=0.839;AN=56;BaseQRankSum=6.415;DP=515;FS=8.105;HRun=1;HaplotypeScore=114.2503;InbreedingCoeff=0.5043;MQ=59.25;MQ0=8;MQRankSum=-4.786;QD=7.62;ReadPosRankSum=2.625;VQSLOD=0.7149;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:23,1:20:42.63:278,43,0	1/1:4,2:6:13.88:92,14,0	0/0:17,0:11:17.45:0,17,217	0/0:20,0:10:12.14:0,12,141	1/1:20,0:18:35.62:294,36,0	1/1:14,0:14:11.44:95,11,0	1/1:18,0:18:17.31:91,17,0	1/1:19,0:19:3.79:75,4,0	1/1:15,0:13:32.34:223,32,0	1/1:27,0:27:52.36:374,52,0	1/1:11,0:10:13.53:72,14,0	1/1:13,0:12:11.61:63,12,0	1/1:22,0:22:14.51:78,15,0	1/1:18,0:18:20.32:109,20,0	0/0:24,0:24:72.19:0,72,878	1/1:28,0:28:34.62:183,35,0	1/1:27,0:27:13.78:86,14,0	1/1:18,0:18:10.09:60,10,0	1/1:26,0:23:15.99:187,16,0	0/1:15,0:15:12.64:68,0,13	0/1:14,0:14:8.27:20,0,8	1/1:16,0:16:21.56:157,22,0	1/1:16,0:16:0.08:39,0,0	0/1:24,0:24:8.90:53,0,9	1/1:18,1:19:37.91:244,38,0	1/1:10,0:10:22.33:159,22,0	1/1:25,1:25:34.74:265,35,0	1/1:8,0:6:14.12:93,14,0
chr10	19548538	.	G	GT	2303.92	PASS	AB=1.000;AC=35;AF=0.625;AN=56;BaseQRankSum=-0.298;DP=517;FS=3.291;HRun=7;HaplotypeScore=117.1400;InbreedingCoeff=0.3239;MQ=59.87;MQ0=8;MQRankSum=1.742;QD=5.91;ReadPosRankSum=-6.699;VQSLOD=-0.7322;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:21:7.45:49,7,0	1/1:6,0:6:4.35:28,4,0	0/0:18,0:12:11.18:0,11,146	0/0:21,0:11:9.33:0,9,101	0/1:20,0:18:3.61:72,0,4	1/1:13,1:14:1.38:70,1,0	1/1:18,0:18:0.08:37,0,0	1/1:19,0:19:11.68:307,12,0	0/1:15,0:13:1.67:12,0,2	0/1:27,0:27:4.76:121,0,5	1/1:12,0:11:21.91:220,22,0	0/0:14,0:13:3.73:0,4,9	0/0:22,0:22:6.23:0,6,13	0/0:18,0:18:8.72:0,9,19	0/0:24,0:24:69.11:0,69,666	0/1:28,0:28:6.89:31,0,7	1/1:27,0:27:1.43:72,1,0	0/1:19,0:19:1.43:29,0,1	1/1:26,0:23:35.66:445,36,0	1/1:10,4:14:19.39:240,19,0	0/1:14,0:14:8.25:38,0,8	1/1:16,0:16:28.38:294,28,0	1/1:16,0:16:18.88:175,19,0	1/1:24,0:24:20.01:199,20,0	0/1:19,0:19:6.38:10,0,6	0/0:10,0:10:1.04:0,1,9	1/1:23,0:22:2.20:9,2,0	1/1:8,0:6:1.71:8,2,0
chr10	19548799	.	AT	A	3086.54	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=11.424;DP=521;FS=28.387;HRun=7;HaplotypeScore=55.0514;InbreedingCoeff=0.9338;MQ=73.40;MQ0=0;MQRankSum=-1.001;QD=22.86;ReadPosRankSum=0.891;VQSLOD=1.8617;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,23:25:72.08:709,72,0	1/1:0,4:4:12.03:122,12,0	0/0:12,0:13:0.18:0,0,39	0/0:8,0:7:5.94:0,6,40	1/1:1,23:23:60:587,60,0	0/0:16,0:16:48.14:0,48,589	0/0:20,0:20:57.15:0,57,700	0/0:23,0:23:57.09:0,57,641	1/1:3,12:15:27.06:275,27,0	0/0:14,0:14:39.12:0,39,480	0/0:22,0:22:63.19:0,63,779	0/0:21,0:21:54.08:0,54,644	0/0:16,0:16:48.12:0,48,566	0/0:17,0:17:42.10:0,42,489	0/0:18,0:18:48.11:0,48,565	0/0:14,0:14:24.08:0,24,302	0/0:37,0:37:99:0,99,1186	0/0:27,0:27:75.04:0,75,851	0/0:23,0:23:60.16:0,60,728	0/0:15,0:15:42.12:0,42,515	0/0:18,0:18:48.15:0,48,601	0/0:26,0:26:72.18:0,72,871	0/0:22,0:22:66.20:0,66,817	0/0:15,0:15:42.10:0,42,500	1/1:1,10:11:21.05:214,21,0	1/1:3,23:26:69.15:698,69,0	1/1:3,20:23:48.04:476,48,0	1/1:1,6:7:21.04:209,21,0
chr10	19548897	.	GA	G	8733.91	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-5.421;DP=471;FS=6.067;HRun=10;HaplotypeScore=50.6834;InbreedingCoeff=0.8589;MQ=62.22;MQ0=1;MQRankSum=-1.459;QD=20.08;ReadPosRankSum=1.838;VQSLOD=5.8019;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,26:27:74.98:651,75,0	1/1:0,5:5:2.99:26,3,0	0/0:10,0:6:7.69:0,8,84	0/0:10,0:4:6.01:0,6,63	1/1:2,20:21:50.77:417,51,0	1/1:2,14:16:44.98:388,45,0	1/1:4,16:21:19.86:389,20,0	1/1:4,15:18:44.96:384,45,0	1/1:1,11:12:26.99:234,27,0	1/1:1,13:14:35.92:304,36,0	1/1:1,18:18:41.97:364,42,0	1/1:2,9:11:23.99:208,24,0	1/1:0,8:8:21:182,21,0	1/1:2,18:20:44.98:391,45,0	0/0:16,0:16:28.35:0,28,396	1/1:1,12:13:32.99:286,33,0	1/1:5,32:37:63.04:654,63,0	1/1:4,29:33:80.97:703,81,0	1/1:3,19:22:53.90:452,54,0	1/1:2,12:14:29.98:260,30,0	1/1:2,16:18:41.99:365,42,0	1/1:1,19:20:50.97:443,51,0	1/1:4,12:16:33.88:289,34,0	1/1:2,7:9:17.99:156,18,0	1/1:0,10:9:20.99:182,21,0	1/1:1,15:16:44.97:386,45,0	1/1:5,15:20:14.81:357,15,0	1/1:2,10:12:29.99:260,30,0
chr10	19548915	.	TC	T	618.44	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-2.876;DP=491;FS=15.529;HRun=1;HaplotypeScore=80.0943;InbreedingCoeff=0.9573;MQ=74.87;MQ0=0;MQRankSum=-1.411;QD=34.36;ReadPosRankSum=-0.233;VQSLOD=1.9335;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:78.27:0,78,1247	0/0:6,0:6:12.04:0,12,192	0/0:11,0:10:22.10:0,22,358	0/0:13,0:11:24.53:0,25,358	0/0:23,0:23:63.20:0,63,983	0/0:22,0:22:66.23:0,66,1052	0/0:23,0:23:69.24:0,69,1103	0/0:20,0:20:60.20:0,60,939	0/0:12,0:12:33.10:0,33,505	0/0:14,0:14:42.14:0,42,651	0/0:20,0:20:57.18:0,57,887	0/0:13,0:13:39.13:0,39,624	0/0:7,0:7:18.06:0,18,286	0/0:19,0:19:51.15:0,51,786	1/1:0,18:18:51.17:713,51,0	0/0:14,0:14:39.13:0,39,621	0/0:32,0:32:81.73:0,82,1272	0/0:30,0:30:84.24:0,84,1308	0/0:21,0:21:60.19:0,60,936	0/0:15,0:15:45.15:0,45,719	0/0:18,0:18:48.15:0,48,744	0/0:24,0:24:72.25:0,72,1150	0/0:18,0:18:50.94:0,51,791	0/0:13,0:13:36.12:0,36,576	0/0:14,0:13:36.11:0,36,552	0/0:21,0:21:63.21:0,63,1006	0/0:13,0:13:39.13:0,39,624	0/0:11,0:11:33.11:0,33,527
chr10	19556832	.	T	TTGAA	7410.50	PASS	AB=1.000;AC=23;AF=0.426;AN=54;BaseQRankSum=-12.290;DP=610;FS=4.495;HRun=0;HaplotypeScore=109.2943;InbreedingCoeff=0.9371;MQ=70.58;MQ0=1;MQRankSum=0.680;QD=27.45;ReadPosRankSum=-1.918;VQSLOD=4.3734;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:33:51.06:0,51,475	0/0:4,0:10:14.75:0,15,139	0/1:17,0:16:0:0,0,0	./.	0/0:10,0:26:30.03:0,30,279	1/1:13,18:32:51.18:1191,51,0	1/1:12,4:17:12.01:233,12,0	0/0:23,0:23:5.99:0,6,49	0/0:12,0:27:33.51:0,34,307	0/0:24,0:24:33.11:0,33,501	0/0:11,0:11:24.07:0,24,343	1/1:12,12:24:30.10:699,30,0	1/1:10,15:26:33.11:737,33,0	1/1:10,10:21:24.08:561,24,0	0/0:21,0:21:45.15:0,45,691	1/1:8,17:25:39.13:911,39,0	1/1:9,7:16:18.06:420,18,0	1/1:12,13:25:36.12:834,36,0	0/0:27,0:27:15.05:0,15,230	0/0:29,0:29:47.78:0,48,687	0/0:21,0:21:24.08:0,24,365	1/1:9,11:21:36.08:774,36,0	1/1:11,9:20:21.07:489,21,0	1/1:13,11:26:24.08:561,24,0	0/0:13,0:25:30.03:0,30,279	0/0:10,0:19:23.77:0,24,214	0/0:12,0:19:17.92:0,18,156	0/0:6,0:10:8.99:0,9,78
chr10	19558471	.	A	AAC	1264.24	PASS	AB=0.986;AC=20;AF=0.357;AN=56;BaseQRankSum=10.486;DP=713;FS=13.771;HRun=0;HaplotypeScore=168.2357;InbreedingCoeff=0.6274;MQ=68.22;MQ0=5;MQRankSum=-3.437;QD=4.75;ReadPosRankSum=-0.345;VQSLOD=2.3747;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:24,1:25:33.93:318,34,0	1/1:10,0:10:11.84:83,12,0	0/0:43,0:28:23.17:0,23,335	0/0:35,0:23:1.88:0,2,213	1/1:27,1:28:5.93:43,6,0	0/0:26,0:26:27.40:0,27,383	0/0:20,0:20:35.38:0,35,328	0/0:26,0:26:53.99:0,54,486	1/1:15,5:21:9.03:132,9,0	0/0:35,0:35:70.22:0,70,614	0/0:25,0:24:26.01:0,26,225	0/0:30,0:30:75.05:0,75,755	0/0:18,0:17:26.46:0,26,309	0/0:29,0:30:58.88:0,59,515	0/1:30,0:30:33.20:33,0,204	0/1:16,1:17:9.14:9,0,272	0/0:33,0:33:8.04:0,8,343	0/1:32,0:32:2.75:3,0,360	0/0:22,0:22:41.60:0,42,397	0/0:23,0:23:63:0,63,607	0/0:35,0:33:65.66:0,66,607	0/0:20,0:20:32.44:0,32,299	0/1:20,0:20:5.79:6,0,87	0/0:25,0:25:28.86:0,29,448	1/1:26,0:26:17.93:142,18,0	1/1:25,0:25:1.68:326,2,0	1/1:21,0:22:28.62:223,29,0	1/1:9,0:9:20.31:138,20,0
chr10	19558485	.	CAG	C	2128.77	PASS	AB=0.891;AC=25;AF=0.463;AN=54;BaseQRankSum=-0.946;DP=717;FS=6.527;HRun=0;HaplotypeScore=164.1238;InbreedingCoeff=-0.0745;MQ=55.03;MQ0=27;MQRankSum=1.331;QD=4.46;ReadPosRankSum=0.891;VQSLOD=2.6616;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:22:14.89:0,15,87	0/0:9,0:9:2.98:0,3,23	./.	0/0:28,0:16:1.76:0,2,5	0/0:31,0:31:4.59:0,5,14	0/1:14,12:26:12.12:223,0,12	0/1:18,7:24:44.12:233,0,44	0/1:30,0:30:18.29:18,0,69	0/1:15,0:14:3.50:4,0,3	0/1:34,0:34:29.67:154,0,30	1/1:12,11:22:17.59:166,18,0	0/1:28,2:29:46.78:47,0,298	1/1:17,3:17:22.74:209,23,0	0/1:25,3:28:86.05:86,0,225	1/1:21,0:26:22.09:173,22,0	0/1:14,4:18:6.22:113,0,6	0/1:23,14:33:99:214,0,102	1/1:25,8:32:41.89:401,42,0	0/1:19,4:20:85.66:86,0,216	0/1:23,2:24:37.21:37,0,333	0/0:32,6:34:23.53:0,24,326	0/0:21,0:20:20.35:0,20,149	1/1:22,1:22:3.27:34,3,0	0/0:27,0:25:6.53:0,7,168	0/0:27,0:26:1.40:0,1,5	0/1:25,1:26:41.69:42,0,173	0/1:23,0:22:18.84:19,0,128	1/1:9,0:8:1.92:33,2,0
chr10	19558509	.	GAGAGAGAGAGACAGAGACAGAGACAGAGAC	G	2989	PASS	AB=0.968;AC=21;AF=0.404;AN=52;BaseQRankSum=-2.457;DP=587;FS=11.729;HRun=0;HaplotypeScore=351.4425;InbreedingCoeff=-0.0351;MQ=43.08;MQ0=44;MQRankSum=-1.146;QD=7.51;ReadPosRankSum=1.966;VQSLOD=0.9509;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:15:20.61:0,21,150	0/0:5,0:5:6.74:0,7,34	./.	./.	0/0:37,0:34:5.71:0,6,90	0/1:22,0:20:99:101,0,126	0/1:27,0:23:38.70:39,0,77	0/1:34,0:31:22.37:22,0,250	0/0:16,0:15:6.01:0,6,123	0/1:31,0:30:99:586,0,169	0/0:20,0:19:14.78:0,15,99	1/1:24,0:22:38.35:431,38,0	0/1:12,0:9:78.55:85,0,79	1/1:19,0:18:44.05:456,44,0	0/1:16,0:21:9.10:275,0,9	0/1:15,0:15:87.52:109,0,88	0/1:32,0:27:67.93:216,0,68	0/1:24,0:22:99:156,0,105	0/1:20,0:17:53.71:54,0,222	0/1:19,0:18:6.26:6,0,332	0/1:34,0:27:26.50:26,0,274	1/1:22,0:20:24.89:232,25,0	0/1:6,15:20:3.76:11,0,4	1/1:18,0:18:29.91:355,30,0	0/0:26,0:25:9.97:0,10,177	0/0:26,0:25:34.95:0,35,409	0/0:22,0:21:20.05:0,20,641	0/0:7,0:6:14.94:0,15,152
chr10	19558513	.	GAGAGAGACAGAGACAGAGACAGAGAC	G	5506.83	PASS	AB=1.000;AC=29;AF=0.558;AN=52;BaseQRankSum=-1.776;DP=582;FS=16.305;HRun=0;HaplotypeScore=338.5797;InbreedingCoeff=-0.0683;MQ=43.14;MQ0=44;MQRankSum=0.519;QD=11.72;ReadPosRankSum=-0.699;VQSLOD=1.4019;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:15:14.62:0,15,87	0/0:4,0:4:3.45:0,3,23	./.	./.	0/0:38,0:35:3.75:0,4,13	1/1:22,0:20:13:413,13,0	0/1:26,0:22:36.43:225,0,36	0/1:32,0:29:57.13:89,0,57	0/1:16,0:15:0.30:0,0,44	1/1:10,20:29:23.79:902,24,0	1/1:20,0:19:18.50:180,19,0	0/1:23,0:21:59.02:59,0,220	1/1:14,0:11:28.79:544,29,0	0/1:19,0:18:97.08:97,0,111	1/1:27,0:25:29.94:374,30,0	1/1:15,0:15:16.28:237,16,0	0/1:34,0:29:78.32:629,0,78	1/1:26,0:24:49.39:849,49,0	0/1:20,0:18:99:214,0,116	0/1:19,0:18:99:255,0,230	0/1:35,0:28:99:155,0,297	0/0:22,0:20:15.59:0,16,109	1/1:21,0:20:3.67:34,4,0	0/1:17,0:16:48.91:49,0,98	0/0:25,0:24:6.10:0,6,41	0/1:27,0:26:99:164,0,184	0/1:21,0:20:19.84:20,0,285	0/1:6,0:5:13.22:19,0,13
chr10	19558515	.	G	GAC	1058.77	PASS	AB=0.974;AC=15;AF=0.288;AN=52;BaseQRankSum=-2.690;DP=589;FS=2.801;HRun=0;HaplotypeScore=191.7114;InbreedingCoeff=-0.0368;MQ=42.65;MQ0=44;MQRankSum=-0.718;QD=3.75;ReadPosRankSum=1.356;VQSLOD=2.6584;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:16:18.16:0,18,143	0/0:4,0:4:5.91:0,6,38	./.	./.	0/0:38,0:35:5.68:0,6,54	0/1:21,1:20:64.50:75,0,65	0/1:25,1:22:13.36:13,0,94	0/0:31,0:28:25.21:0,25,235	1/1:16,0:15:9.06:62,9,0	0/1:28,0:27:11.58:12,0,188	0/1:19,1:19:74.59:78,0,75	0/0:23,0:21:8.70:0,9,163	0/1:14,0:11:50.33:50,0,106	0/0:28,0:27:13.29:0,13,118	1/1:29,0:27:24.42:615,24,0	0/1:14,0:14:29.38:53,0,29	0/1:31,3:29:99:105,0,188	0/1:24,2:24:99:110,0,156	0/0:18,0:16:13.90:0,14,285	0/0:19,0:18:38.51:0,39,456	0/0:36,0:29:29.69:0,30,372	0/0:23,0:21:17.03:0,17,75	0/1:20,0:19:0.40:0,0,2	0/0:16,0:15:21.15:0,21,83	0/0:27,0:26:8.78:0,9,76	0/1:27,0:26:17.77:18,0,363	0/0:22,0:21:8.24:0,8,339	0/1:6,0:5:22.70:23,0,65
chr10	19558519	.	GACAGAGACAGAGACAGAGAC	G	4192.73	PASS	AB=0.958;AC=30;AF=0.577;AN=52;BaseQRankSum=1.092;DP=576;FS=7.987;HRun=0;HaplotypeScore=301.3523;InbreedingCoeff=-0.1381;MQ=41.83;MQ0=46;MQRankSum=1.094;QD=8.20;ReadPosRankSum=-2.325;VQSLOD=0.8420;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:21,0:17:10.37:10,0,12	0/0:4,0:4:1.25:0,1,3	./.	./.	0/1:18,18:33:0.79:1,0,1	1/1:21,0:19:4.65:185,5,0	0/1:27,0:24:67.61:68,0,89	0/1:31,0:28:66.04:66,0,105	0/1:11,0:13:23.43:36,0,23	1/1:25,0:24:27.93:799,28,0	1/1:18,0:17:7.70:63,8,0	0/0:24,0:22:15.79:0,16,477	1/1:14,0:12:29.58:383,30,0	0/1:28,0:27:99:128,0,371	0/1:28,0:26:35.27:45,0,35	0/1:13,0:13:21.21:52,0,21	0/1:35,0:30:99:485,0,130	1/1:25,0:24:17.95:526,18,0	0/1:19,0:15:99:118,0,135	0/1:19,0:18:99:297,0,239	0/1:35,0:28:99:259,0,272	0/0:22,0:20:20.35:0,20,297	1/1:20,0:19:6.42:40,6,0	0/0:15,0:14:18.76:0,19,246	1/1:24,0:23:7.13:102,7,0	0/1:27,0:26:99:210,0,100	0/1:21,0:21:81.02:177,0,81	1/1:5,0:5:11.95:141,12,0
chr10	19558531	.	GAC	G	944.15	PASS	AB=0.977;AC=21;AF=0.404;AN=52;BaseQRankSum=0.960;DP=569;FS=38.139;HRun=0;HaplotypeScore=189.7582;InbreedingCoeff=-0.3354;MQ=41.89;MQ0=46;MQRankSum=4.073;QD=2.25;ReadPosRankSum=-3.486;VQSLOD=0.8558;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:17,0:13:6.22:15,0,6	1/1:4,0:4:2.89:25,3,0	./.	./.	0/0:32,0:29:3.01:0,3,53	0/1:21,0:19:12.81:13,0,444	0/0:25,0:21:20.59:0,21,255	0/0:27,0:23:40.97:0,41,841	0/1:17,0:16:34.49:34,0,134	0/1:24,0:23:99:138,0,201	0/0:15,0:14:10.01:0,10,108	0/1:27,0:25:8.92:9,0,547	0/1:14,1:12:66.38:66,0,84	0/1:29,0:28:38.01:38,0,517	0/1:36,0:34:96.14:96,0,452	0/1:13,0:13:0.92:1,0,228	0/1:32,1:28:48.15:48,0,516	0/1:25,0:23:99:119,0,515	0/0:18,0:13:5.04:0,5,415	0/1:24,0:23:99:120,0,395	0/1:35,0:28:62.96:63,0,201	0/0:18,0:16:14.78:0,15,216	0/1:18,0:17:0.01:0,0,0	0/0:14,0:13:22.50:0,23,342	1/1:25,0:25:9.39:78,9,0	0/1:14,10:23:99:126,0,414	0/1:26,0:24:57.65:58,0,433	0/1:7,0:7:46.65:47,0,90
chr10	19563123	.	TA	T	4900.07	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=16.124;DP=625;FS=11.226;HRun=3;HaplotypeScore=70.8640;InbreedingCoeff=0.9697;MQ=80.48;MQ0=0;MQRankSum=-0.764;QD=32.03;ReadPosRankSum=0.350;VQSLOD=4.2227;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,26:27:75.24:929,75,0	1/1:0,9:9:27.08:335,27,0	0/0:21,0:21:57.16:0,57,779	0/0:21,0:21:41.79:0,42,521	1/1:0,24:24:60.19:743,60,0	0/0:16,0:16:48.16:0,48,691	0/0:29,0:29:81.26:0,81,1150	0/0:28,0:28:78.25:0,78,1106	1/1:0,20:20:60.19:744,60,0	0/0:23,0:23:66.21:0,66,928	0/0:23,0:23:66.21:0,66,928	0/0:20,0:20:60.20:0,60,863	0/0:30,0:30:90.30:0,90,1290	0/0:18,0:18:51.17:0,51,732	0/0:28,0:28:81.27:0,81,1159	0/0:27,0:27:78.26:0,78,1122	0/0:15,0:15:42.13:0,42,586	0/0:30,0:30:90.29:0,90,1276	0/0:22,0:22:63.19:0,63,871	0/0:29,0:29:84.25:0,84,1168	0/0:27,0:27:81.05:0,81,1118	0/0:23,0:23:60.20:0,60,858	0/0:20,0:20:60.20:0,60,858	0/0:22,0:22:66.22:0,66,940	1/1:1,18:19:54.17:669,54,0	1/1:1,22:23:21.78:702,22,0	1/1:1,23:24:60.19:742,60,0	1/1:0,7:7:3.01:37,3,0
chr10	19563248	.	T	TAC	9935	PASS	AB=0.746;AC=46;AF=0.852;AN=54;BaseQRankSum=-4.561;DP=677;FS=6.244;HRun=0;HaplotypeScore=128.2015;InbreedingCoeff=0.3459;MQ=61.25;MQ0=11;MQRankSum=-0.241;QD=16.48;ReadPosRankSum=3.063;VQSLOD=4.5338;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:18:8.84:68,9,0	1/1:5,0:5:6:52,6,0	0/0:46,0:33:23.70:0,24,232	0/0:24,0:16:3:0,3,28	0/1:21,0:19:0.21:0,0,0	1/1:4,13:18:9.93:306,10,0	1/1:9,8:18:23.80:327,24,0	1/1:33,12:47:10.76:521,11,0	1/1:18,0:17:5.87:63,6,0	1/1:13,14:27:39.13:580,39,0	1/1:4,16:22:51.15:747,51,0	1/1:7,15:22:33.11:512,33,0	0/1:10,18:29:46.25:686,0,46	1/1:8,15:24:39.13:604,39,0	1/1:30,0:29:4.46:36,4,0	1/1:8,18:26:42.14:639,42,0	1/1:12,6:20:17.97:278,18,0	0/1:18,11:29:64.36:406,0,64	1/1:11,13:24:42.09:587,42,0	1/1:7,20:27:8.11:571,8,0	0/1:13,13:26:4.35:388,0,4	1/1:8,23:31:57.19:883,57,0	1/1:6,18:24:45.15:696,45,0	1/1:8,14:24:37.37:560,37,0	1/1:20,0:20:9.02:110,9,0	1/1:24,0:24:29.10:234,29,0	1/1:26,0:23:7.49:80,7,0	./.
chr10	19564293	.	C	CTG	9822.66	PASS	AB=0.549;AC=15;AF=0.268;AN=56;BaseQRankSum=-14.624;DP=852;FS=12.187;HRun=0;HaplotypeScore=94.8755;InbreedingCoeff=0.9160;MQ=79.69;MQ0=2;MQRankSum=-3.260;QD=42.89;ReadPosRankSum=0.074;VQSLOD=5.5596;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,63:64:99:2994,172,0	1/1:2,8:9:21.07:366,21,0	0/0:17,0:17:42.14:0,42,566	0/0:26,0:26:64.91:0,65,844	1/1:1,21:22:51.17:894,51,0	0/0:16,0:16:48.16:0,48,650	0/0:33,0:33:84.28:0,84,1137	0/0:22,0:22:39.12:0,39,514	1/1:4,25:29:72.25:1252,72,0	0/0:54,0:54:99:0,135,1826	0/0:25,0:25:69.23:0,69,933	0/0:48,0:48:99:0,126,1704	0/0:36,0:36:99:0,105,1403	0/0:37,0:37:99:0,102,1379	0/0:36,0:36:99:0,102,1347	0/0:47,0:47:99:0,132,1770	0/0:32,0:32:96.30:0,96,1278	0/0:25,0:25:69.23:0,69,931	0/0:14,0:14:39.12:0,39,512	0/0:28,0:28:69.17:0,69,896	0/0:46,0:46:99:0,123,1629	0/0:30,0:30:78.16:0,78,998	0/0:22,0:22:66.22:0,66,892	0/0:29,0:29:72.22:0,72,958	1/1:1,19:19:48.16:842,48,0	0/1:7,32:39:10.42:1651,0,10	1/1:6,25:33:72.25:1250,72,0	1/1:0,10:11:33.11:574,33,0
chr10	19565414	.	C	CTT	1131.01	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.421;DP=717;FS=0.000;HRun=3;HaplotypeScore=90.3022;InbreedingCoeff=0.9998;MQ=81.68;MQ0=0;MQRankSum=-6.947;QD=51.41;ReadPosRankSum=0.717;VQSLOD=2.6678;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,144,2313	0/0:13,0:13:39.12:0,39,612	0/0:18,0:18:50.38:0,50,753	0/0:22,0:22:57.18:0,57,827	0/0:28,0:28:84.29:0,84,1359	0/0:24,0:24:63.22:0,63,1028	0/0:23,0:23:66.23:0,66,1074	0/0:19,0:19:57.19:0,57,904	0/0:33,0:33:99:0,99,1615	0/0:36,0:36:99:0,108,1731	0/0:22,0:22:63.21:0,63,1014	0/0:28,0:28:84.29:0,84,1368	0/0:27,0:27:81.28:0,81,1305	0/0:22,0:22:66.21:0,66,1052	1/1:1,19:22:66.23:1226,66,0	0/0:23,0:23:69.22:0,69,1100	0/0:31,0:30:93.27:0,93,1465	0/0:19,0:19:57.18:0,57,901	0/0:24,0:24:72.24:0,72,1150	0/0:27,0:27:81.28:0,81,1320	0/0:30,0:30:84.22:0,84,1281	0/0:24,0:24:72.25:0,72,1172	0/0:25,0:25:75.26:0,75,1213	0/0:24,0:24:72.25:0,72,1172	0/0:26,0:26:75.26:0,75,1212	0/0:29,0:29:87.30:0,87,1420	0/0:38,0:38:99:0,111,1754	0/0:12,0:12:36.12:0,36,587
chr10	19565415	.	A	AT	706.29	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.944;DP=715;FS=0.000;HRun=0;HaplotypeScore=77.1402;InbreedingCoeff=0.9997;MQ=81.21;MQ0=0;MQRankSum=-7.162;QD=30.71;ReadPosRankSum=1.177;VQSLOD=3.5333;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,144,2013	0/0:12,0:12:36.12:0,36,504	0/0:18,0:18:49.40:0,49,659	0/0:21,0:21:60.11:0,60,715	0/0:28,0:28:84.28:0,84,1174	0/0:24,0:24:66.21:0,66,907	0/0:23,0:23:69.22:0,69,948	0/0:20,0:20:57.18:0,57,782	0/0:33,0:33:99:0,99,1385	0/0:35,0:35:99:0,105,1467	0/0:22,0:22:63.20:0,63,865	0/0:28,0:28:84.27:0,84,1160	0/0:27,0:27:81.24:0,81,1107	0/0:23,0:23:63.21:0,63,879	1/1:4,19:23:64.56:801,65,0	0/0:23,0:23:69.23:0,69,965	0/0:29,0:28:87.29:0,87,1217	0/0:19,0:19:57.17:0,57,779	0/0:24,0:24:72.23:0,72,991	0/0:27,0:27:81.27:0,81,1133	0/0:29,0:29:84.26:0,84,1138	0/0:25,0:25:72.24:0,72,1002	0/0:25,0:25:75.24:0,75,1033	0/0:24,0:24:72.24:0,72,1007	0/0:26,0:26:78.23:0,78,1056	0/0:29,0:29:87.29:0,87,1217	0/0:37,0:37:99:0,111,1535	0/0:12,0:12:36.12:0,36,504
chr10	19565418	.	T	TGCCCA	1844.28	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.954;DP=722;FS=0.000;HRun=0;HaplotypeScore=135.3683;InbreedingCoeff=0.9997;MQ=80.27;MQ0=0;MQRankSum=-7.111;QD=80.19;ReadPosRankSum=1.720;VQSLOD=5.2523;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,150,3363	0/0:12,0:12:36.12:0,36,839	0/0:19,0:20:51.14:0,51,1003	0/0:19,0:19:51.17:0,51,1089	0/0:30,0:30:87.30:0,87,1970	0/0:25,0:25:69.23:0,69,1563	0/0:23,0:23:69.21:0,69,1514	0/0:21,0:21:57.19:0,57,1218	0/0:34,0:34:99:0,99,2308	0/0:39,0:39:99:0,114,2545	0/0:21,0:21:63.17:0,63,1417	0/0:27,0:27:81.28:0,81,1879	0/0:25,0:25:75.22:0,75,1654	0/0:21,0:21:63.22:0,63,1442	1/1:4,19:23:66:1939,66,0	0/0:24,0:24:69.24:0,69,1608	0/0:32,0:31:96.31:0,96,2121	0/0:19,0:19:57.18:0,57,1283	0/0:24,0:24:69.24:0,69,1579	0/0:27,0:27:81.28:0,81,1833	0/0:28,0:28:78.26:0,78,1771	0/0:24,0:24:72.23:0,72,1575	0/0:24,0:24:72.25:0,72,1678	0/0:24,0:24:72.25:0,72,1620	0/0:27,0:27:81.26:0,81,1823	0/0:29,0:29:87.29:0,87,1986	0/0:37,0:37:99:0,111,2550	0/0:12,0:12:36.12:0,36,839
chr10	19566191	.	GTCCTCCCA	G	2683.31	PASS	AB=0.846;AC=3;AF=0.054;AN=56;BaseQRankSum=9.828;DP=843;FS=0.000;HRun=0;HaplotypeScore=207.1067;InbreedingCoeff=0.6348;MQ=68.48;MQ0=0;MQRankSum=-8.281;QD=54.76;ReadPosRankSum=0.958;VQSLOD=2.8581;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,154,6600	0/0:17,0:17:51.18:0,51,2198	0/1:9,0:11:7.23:7,0,561	0/0:10,0:10:5.65:0,6,68	0/0:32,0:32:96.31:0,96,4149	0/0:28,0:28:81.28:0,81,3647	0/0:29,0:29:84.29:0,84,3500	0/0:44,0:44:99:0,132,5655	0/0:31,0:31:93.32:0,93,4096	0/0:44,0:44:99:0,129,5805	0/0:18,0:18:54.19:0,54,2355	0/0:45,0:45:99:0,135,5831	0/0:27,0:27:81.28:0,81,3562	0/0:36,0:36:99:0,105,4670	1/1:2,36:38:95.97:2777,96,0	0/0:29,0:29:84.29:0,84,3657	0/0:28,0:28:84.27:0,84,3527	0/0:25,0:25:69.24:0,69,3063	0/0:16,0:16:45.13:0,45,1917	0/0:35,0:35:99:0,102,4525	0/0:42,0:42:99:0,120,5275	0/0:33,0:33:96.31:0,96,4050	0/0:27,0:27:81.28:0,81,3573	0/0:42,0:42:99:0,126,5375	0/0:32,0:32:96.33:0,96,4256	0/0:26,0:26:78.27:0,78,3346	0/0:30,0:30:87.30:0,87,3662	0/0:17,0:17:48.16:0,48,1994
chr10	19567972	.	CA	C	659.39	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.931;DP=606;FS=0.773;HRun=1;HaplotypeScore=67.6985;InbreedingCoeff=0.9993;MQ=73.75;MQ0=1;MQRankSum=-3.250;QD=27.47;ReadPosRankSum=2.412;VQSLOD=3.5564;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,117,1593	0/0:13,0:13:39.08:0,39,524	0/0:21,0:20:46.50:0,46,676	0/0:19,0:17:35.33:0,35,516	0/0:21,0:21:63.21:0,63,926	0/0:20,0:19:60.14:0,60,790	0/0:24,0:24:69.15:0,69,923	0/0:15,0:15:42.11:0,42,533	0/0:14,0:14:42.14:0,42,612	0/0:23,0:23:69.20:0,69,935	0/0:16,0:16:42.13:0,42,613	0/0:24,0:24:72.24:0,72,1058	0/0:22,0:22:60.15:0,60,871	0/0:25,0:25:69.19:0,69,957	1/1:1,23:23:43.46:754,43,0	0/0:26,0:26:75.22:0,75,1039	0/0:32,0:32:93.05:0,93,1261	0/0:13,0:13:36.12:0,36,538	0/0:23,0:23:69.17:0,69,910	0/0:25,0:25:72.17:0,72,981	0/0:29,0:29:87.25:0,87,1241	0/0:13,0:13:33.08:0,33,452	0/0:21,0:21:54.15:0,54,828	0/0:23,0:23:60.13:0,60,802	0/0:19,0:19:57.18:0,57,798	0/0:25,0:25:67.46:0,67,943	0/0:19,0:19:57.15:0,57,795	0/0:18,0:18:54.11:0,54,724
chr10	19569090	.	GA	G	192.03	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.255;DP=503;FS=0.969;HRun=10;HaplotypeScore=49.2614;InbreedingCoeff=0.8184;MQ=73.83;MQ0=0;MQRankSum=-0.524;QD=14.77;ReadPosRankSum=-0.960;VQSLOD=3.2940;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:25:69.14:0,69,742	0/0:10,0:10:26.91:0,27,279	0/0:16,0:13:6.44:0,6,83	0/0:12,0:12:6.19:0,6,141	0/0:34,0:34:96.23:0,96,1043	0/0:23,0:24:63:0,63,678	0/0:12,0:12:33.07:0,33,355	0/0:30,0:30:78.20:0,78,855	0/0:23,0:23:57.15:0,57,631	0/0:15,0:14:45.09:0,45,474	0/0:22,0:22:60.16:0,60,664	0/0:13,0:13:36.10:0,36,398	0/0:17,0:17:51.10:0,51,551	0/0:12,0:12:24.69:0,25,294	1/1:1,12:13:32.99:287,33,0	0/0:15,0:15:39.09:0,39,423	0/0:14,0:14:32.99:0,33,325	0/0:21,0:21:57.15:0,57,630	0/0:19,1:22:27.59:0,28,481	0/0:20,0:20:51.14:0,51,564	0/0:17,1:18:15.71:0,16,374	0/0:18,0:18:42.08:0,42,442	0/0:15,0:15:39.11:0,39,431	0/0:10,0:10:22.38:0,22,259	0/0:12,0:12:36.10:0,36,398	0/0:21,0:21:54.15:0,54,597	0/0:24,0:24:63.15:0,63,687	0/0:15,0:15:45.12:0,45,498
chr10	19569586	.	GAA	G	4402.29	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=9.507;DP=572;FS=4.270;HRun=12;HaplotypeScore=74.9460;InbreedingCoeff=0.9910;MQ=67.15;MQ0=2;MQRankSum=0.358;QD=22.93;ReadPosRankSum=3.126;VQSLOD=4.8154;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,19:25:48.03:487,48,0	1/1:1,9:11:14.54:205,15,0	0/0:11,0:10:12.04:0,12,178	0/0:12,0:12:26.38:0,26,250	1/1:3,28:29:68.25:689,68,0	0/0:29,0:30:77.73:0,78,1087	0/0:20,0:22:62.17:0,62,846	0/0:22,0:22:51.16:0,51,725	1/1:0,18:18:51.11:519,51,0	0/0:18,0:18:48.15:0,48,688	0/0:23,0:23:51.13:0,51,684	0/0:17,0:17:48.12:0,48,690	0/0:11,0:13:29.58:0,30,394	0/0:13,0:13:33.07:0,33,464	0/0:2,0:22:57.05:0,57,566	0/0:18,0:19:54.11:0,54,726	0/0:24,0:24:60.16:0,60,852	0/0:19,0:19:57.17:0,57,824	0/0:18,0:18:42.13:0,42,606	0/0:36,0:37:99:0,105,1546	0/0:7,0:8:24.07:0,24,340	0/0:11,0:11:33.07:0,33,466	0/0:22,0:22:51.17:0,51,759	0/0:15,0:17:44.60:0,45,577	1/1:7,24:32:59.83:592,60,0	1/1:5,25:31:27.14:709,27,0	1/1:0,27:28:80.92:805,81,0	1/1:2,14:16:39.06:397,39,0
chr10	19570397	.	CAAAAA	C	7607.17	PASS	AB=0.585;AC=51;AF=0.911;AN=56;BaseQRankSum=-1.890;DP=495;FS=7.336;HRun=18;HaplotypeScore=112.2364;InbreedingCoeff=0.5934;MQ=70.14;MQ0=1;MQRankSum=-2.717;QD=16.83;ReadPosRankSum=5.765;VQSLOD=0.9375;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,0:19:20.29:194,20,0	1/1:0,0:12:21.74:205,22,0	0/0:28,0:18:20.50:0,21,361	0/0:14,0:8:3.29:0,3,94	1/1:9,0:25:7.05:160,7,0	1/1:6,14:23:44.77:610,45,0	1/1:3,4:7:5.88:72,6,0	1/1:9,10:20:31.55:433,32,0	1/1:2,1:14:34.38:337,34,0	1/1:10,8:19:23.44:333,23,0	1/1:4,15:20:26.77:431,27,0	1/1:3,8:13:20.92:276,21,0	1/1:2,0:24:38.83:376,39,0	1/1:3,7:10:5.42:63,5,0	1/1:6,0:18:20.37:71,20,0	1/1:6,9:17:23.20:299,23,0	1/1:5,11:17:17.61:231,18,0	1/1:6,10:18:20.61:290,21,0	1/1:5,7:13:10.34:312,10,0	1/1:7,23:31:46.81:630,47,0	1/1:3,5:8:8.91:122,9,0	1/1:7,11:21:41.35:531,41,0	1/1:9,13:24:29.07:436,29,0	1/1:3,4:7:8.87:131,9,0	1/1:2,1:20:32.98:333,33,0	1/1:6,0:20:34.12:311,34,0	0/1:7,0:24:0.44:334,0,0	1/1:2,0:7:8.88:87,9,0
chr10	19572127	.	GTATATA	G	9726.52	PASS	AB=0.690;AC=43;AF=0.768;AN=56;BaseQRankSum=-1.586;DP=479;FS=4.119;HRun=0;HaplotypeScore=138.0376;InbreedingCoeff=0.4799;MQ=68.36;MQ0=1;MQRankSum=-1.624;QD=24.94;ReadPosRankSum=6.666;VQSLOD=3.9080;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:2,9:11:6.02:134,6,0	1/1:0,13:13:33.08:690,33,0	0/1:20,0:12:3.10:3,0,41	0/0:36,0:20:20.01:0,20,274	1/1:4,29:34:32.45:501,32,0	0/0:0,0:22:2.26:0,2,88	1/1:2,0:7:1.41:4,1,0	1/1:9,43:52:99:2696,129,0	1/1:1,13:14:24.04:489,24,0	0/1:2,0:15:5.52:6,0,29	0/1:4,0:30:1.85:2,0,65	1/1:2,0:8:2.10:5,2,0	0/0:3,0:6:1.54:0,2,27	0/0:5,0:8:4.67:0,5,51	1/1:1,17:18:33.07:689,33,0	1/1:1,1:8:5.23:72,5,0	1/1:2,0:14:4.24:10,4,0	1/1:2,0:13:3.77:9,4,0	1/1:2,0:11:2.20:7,2,0	0/0:6,0:16:8.46:0,8,117	1/1:0,0:4:1.41:3,1,0	1/1:2,0:5:0.94:2,1,0	1/1:1,0:6:1.88:5,2,0	1/1:0,0:3:1.41:3,1,0	1/1:0,26:26:51.13:1090,51,0	1/1:2,27:29:81.26:1744,81,0	1/1:7,25:32:54.14:1093,54,0	1/1:0,17:17:21.07:469,21,0
chr10	19577454	.	GA	G	8873.37	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=8.942;DP=775;FS=6.892;HRun=2;HaplotypeScore=95.2822;InbreedingCoeff=0.9907;MQ=84.04;MQ0=0;MQRankSum=-6.860;QD=36.52;ReadPosRankSum=3.249;VQSLOD=5.1666;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,53:53:99:1987,153,0	1/1:0,18:18:51.17:662,51,0	0/0:26,0:26:78.26:0,78,1143	0/0:23,0:23:62.57:0,63,895	1/1:1,29:30:87.28:1128,87,0	0/0:16,0:16:42.13:0,42,612	0/0:28,0:28:84.22:0,84,1175	0/0:30,0:30:87.28:0,87,1285	1/1:0,18:18:51.17:662,51,0	0/0:27,0:27:78.26:0,78,1170	0/0:11,0:11:30.10:0,30,450	0/0:19,0:19:57.19:0,57,855	0/0:27,0:27:72.24:0,72,1079	0/0:31,0:31:93.32:0,93,1394	1/1:0,41:41:99:1441,111,0	0/0:28,0:28:84.28:0,84,1240	0/0:46,0:46:99:0,135,2006	0/0:45,0:45:99:0,135,1998	0/0:22,0:22:66.22:0,66,989	0/0:25,0:25:75.24:0,75,1105	0/0:49,0:49:99:0,144,2117	0/0:19,0:19:57.19:0,57,854	0/0:25,0:25:75.25:0,75,1121	0/0:35,0:35:96.75:0,97,1414	1/1:0,25:25:69.22:896,69,0	1/1:1,25:26:33.27:929,33,0	1/1:0,29:29:81.26:1052,81,0	1/1:0,3:3:9.03:117,9,0
chr10	19579044	.	G	GA	26995.36	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-12.625;DP=784;FS=4.376;HRun=1;HaplotypeScore=64.8130;InbreedingCoeff=0.9964;MQ=80.98;MQ0=0;MQRankSum=-7.179;QD=39.24;ReadPosRankSum=8.927;VQSLOD=3.8783;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,45:45:99:1771,120,0	1/1:1,9:10:24.08:359,24,0	0/0:31,0:31:83.58:0,84,996	0/0:24,0:24:65.79:0,66,767	1/1:1,20:21:60.20:895,60,0	1/1:1,31:32:84.28:1252,84,0	1/1:1,20:21:48.16:718,48,0	0/0:41,0:41:99:0,120,1521	1/1:0,28:28:78.26:1168,78,0	1/1:0,30:30:90.29:1319,90,0	1/1:0,19:19:51.17:764,51,0	1/1:0,30:30:75.25:1122,75,0	1/1:0,37:37:96.33:1435,96,0	1/1:1,28:29:69.23:1033,69,0	1/1:0,42:42:99:1528,102,0	1/1:0,37:37:96.33:1438,96,0	1/1:1,35:36:90.30:1346,90,0	1/1:1,18:19:45.15:673,45,0	1/1:3,25:28:81.20:1121,81,0	1/1:0,29:29:81.17:1161,81,0	1/1:1,41:42:99:1797,120,0	1/1:0,25:25:69.19:1001,69,0	1/1:0,15:15:39.13:584,39,0	1/1:2,23:25:63.20:922,63,0	1/1:1,24:25:63.21:943,63,0	1/1:1,36:37:99:1615,108,0	1/1:0,20:20:51.17:763,51,0	1/1:0,6:6:18.06:270,18,0
chr10	19579227	.	G	GTCCA	14314.65	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-14.446;DP=853;FS=0.623;HRun=0;HaplotypeScore=130.7715;InbreedingCoeff=0.9999;MQ=74.63;MQ0=0;MQRankSum=-3.728;QD=60.66;ReadPosRankSum=2.374;VQSLOD=6.8101;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,46:57:99:3244,123,0	1/1:2,16:18:48.16:1225,48,0	0/0:25,0:25:51.07:0,51,894	0/0:28,0:28:59.75:0,60,1258	1/1:6,26:32:63.22:1638,63,0	0/0:28,0:28:84.29:0,84,1545	0/0:25,0:25:69.24:0,69,1263	0/0:32,0:32:84.29:0,84,1541	1/1:4,25:29:78.27:1978,78,0	0/0:30,0:30:87.28:0,87,1545	0/0:25,0:25:72.25:0,72,1324	0/0:29,0:29:87.25:0,87,1502	0/0:33,0:33:93.31:0,93,1675	0/0:28,0:28:78.27:0,78,1435	0/0:40,0:40:99:0,111,2035	0/0:40,1:41:38.14:0,38,1982	0/0:34,0:34:99:0,99,1822	0/0:15,0:15:39.13:0,39,718	0/0:30,0:30:72.23:0,72,1259	0/0:39,0:38:99:0,105,1899	0/0:36,0:36:93.30:0,93,1680	0/0:40,0:40:99:0,114,2031	0/0:21,0:21:54.16:0,54,952	0/0:38,0:38:99:0,99,1821	1/1:3,20:25:51.18:1346,51,0	1/1:6,27:35:35.06:2035,35,0	1/1:1,24:26:72.11:1898,72,0	1/1:2,12:14:36.12:950,36,0
chr10	19581211	.	GCACACACACACACGCA	G	519.65	PASS	AB=0.630;AC=1;AF=0.018;AN=56;BaseQRankSum=4.282;DP=703;FS=30.857;HRun=0;HaplotypeScore=272.5242;InbreedingCoeff=-0.0165;MQ=56.30;MQ0=22;MQRankSum=-0.216;QD=17.92;ReadPosRankSum=-3.261;VQSLOD=0.9457;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:70.27:0,70,2525	0/0:10,0:10:24.07:0,24,614	0/0:32,0:14:32.81:0,33,544	0/0:52,0:14:15.42:0,15,487	0/0:21,0:21:53.78:0,54,1098	0/0:12,0:12:27.06:0,27,690	0/0:29,0:29:81.24:0,81,2011	0/1:12,17:29:29.01:594,0,29	0/0:29,0:29:81.13:0,81,2104	0/0:19,0:19:57.10:0,57,1512	0/0:9,0:10:30.10:0,30,1209	0/0:19,0:17:46.08:0,46,1304	0/0:27,0:28:75.18:0,75,2425	0/0:25,0:25:69.15:0,69,1826	0/0:35,0:33:80.29:0,80,1877	0/0:21,0:20:51.60:0,52,1832	0/0:27,0:27:54.69:0,55,3002	0/0:13,0:13:38.75:0,39,936	0/0:21,0:21:54.16:0,54,1454	0/0:18,0:17:51.13:0,51,1500	0/0:72,0:69:99:0,177,5400	0/0:23,0:23:60.17:0,60,1550	0/0:13,0:12:23.98:0,24,402	0/0:32,0:32:83.26:0,83,2569	0/0:22,0:20:45.13:0,45,1062	0/0:24,0:24:63.18:0,63,1392	0/0:15,0:14:34.69:0,35,471	0/0:13,0:14:36.02:0,36,584
chr10	19581231	.	GCACACACA	G	444.97	PASS	AB=0.911;AC=12;AF=0.231;AN=52;BaseQRankSum=3.915;DP=665;FS=32.560;HRun=0;HaplotypeScore=161.4427;InbreedingCoeff=0.3475;MQ=51.00;MQ0=30;MQRankSum=-0.269;QD=2.66;ReadPosRankSum=-3.740;VQSLOD=0.1716;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:43,2:45:29.19:171,0,29	0/0:8,0:8:3.87:0,4,25	./.	./.	1/1:14,1:15:0.47:1,0,0	0/1:14,0:14:61.89:62,0,172	0/0:24,0:24:6.46:0,6,49	0/0:32,0:31:12.97:0,13,77	0/1:21,0:21:40.49:40,0,189	0/0:16,0:15:14.93:0,15,206	0/0:9,0:9:15.02:0,15,311	0/0:20,0:18:21.03:0,21,368	0/0:23,0:22:30.06:0,30,746	0/0:20,0:20:23.87:0,24,516	0/0:26,1:25:7.15:0,7,132	0/0:19,0:20:32.92:0,33,638	0/0:24,0:25:46.88:0,47,1125	0/0:23,0:22:25.46:0,25,375	0/0:25,0:24:20.67:0,21,293	0/0:18,0:16:17.94:0,18,296	0/0:85,0:79:71.18:0,71,1201	0/0:21,0:21:16.28:0,16,386	0/0:14,0:13:6.02:0,6,223	0/0:31,0:32:47.17:0,47,862	0/1:17,10:24:9.59:19,0,10	1/1:19,6:23:9.82:185,10,0	1/1:8,2:8:3.01:49,3,0	1/1:9,0:9:6:58,6,0
chr10	19581281	.	A	ACG	7788.44	PASS	AB=0.953;AC=44;AF=0.786;AN=56;BaseQRankSum=-4.918;DP=629;FS=0.911;HRun=0;HaplotypeScore=95.9906;InbreedingCoeff=0.2012;MQ=67.08;MQ0=14;MQRankSum=-1.938;QD=14.01;ReadPosRankSum=2.360;VQSLOD=4.7339;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:30:66.65:500,67,0	1/1:7,0:7:14.86:106,15,0	0/0:39,0:21:53.05:0,53,534	0/0:34,0:21:36.29:0,36,433	1/1:9,0:9:23.55:156,24,0	1/1:18,0:18:24.21:234,24,0	1/1:23,0:23:62.46:447,62,0	1/1:26,0:26:19.88:352,20,0	1/1:25,0:25:65.71:518,66,0	1/1:19,0:19:44.58:372,45,0	0/1:4,6:10:18.87:51,0,19	1/1:18,0:18:11.28:285,11,0	0/1:30,0:30:1.43:353,0,1	0/1:19,0:19:9.71:248,0,10	1/1:24,0:24:37.12:422,37,0	0/1:16,0:16:33.08:138,0,33	0/1:32,0:32:20.70:356,0,21	1/1:20,0:20:1.94:230,2,0	1/1:25,0:22:36.44:336,36,0	1/1:11,0:11:11.41:132,11,0	1/1:73,0:70:99:961,115,0	0/1:13,0:13:3.36:152,0,3	0/1:10,0:10:1.90:113,0,2	0/1:32,0:31:3.06:340,0,3	1/1:23,0:22:27.91:211,28,0	1/1:23,0:22:56.05:400,56,0	1/1:16,0:16:41.23:290,41,0	1/1:4,0:4:8.93:86,9,0
chr10	19581433	.	CT	C	7708.37	PASS	AB=0.833;AC=33;AF=0.589;AN=56;BaseQRankSum=10.723;DP=654;FS=0.000;HRun=10;HaplotypeScore=70.0393;InbreedingCoeff=0.9074;MQ=76.61;MQ0=0;MQRankSum=-0.574;QD=19.77;ReadPosRankSum=5.261;VQSLOD=5.2788;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,105,1124	0/0:13,0:13:33.08:0,33,356	0/1:16,4:18:37.29:37,0,226	0/0:18,0:18:5.35:0,5,229	0/0:25,0:25:57.15:0,57,630	1/1:2,21:23:52.05:510,52,0	1/1:5,21:26:53.97:469,54,0	0/0:32,0:32:61.18:0,61,890	0/0:26,0:26:75.10:0,75,781	1/1:1,20:21:59.99:521,60,0	1/1:5,14:19:41.99:364,42,0	1/1:1,23:25:67.20:553,67,0	1/1:2,21:23:50.98:443,51,0	1/1:3,20:23:56.98:495,57,0	0/0:18,1:19:22.06:0,22,463	1/1:3,24:27:68.97:599,69,0	1/1:4,31:35:80.97:703,81,0	1/1:0,16:16:47.99:417,48,0	1/1:3,21:24:59.97:518,60,0	1/1:1,13:14:29.97:260,30,0	1/1:6,18:24:31.38:420,31,0	1/1:0,24:24:62.99:547,63,0	1/1:3,18:21:53.97:469,54,0	1/1:2,23:25:17.81:383,18,0	0/0:26,0:26:66.18:0,66,730	0/0:27,0:27:69.18:0,69,756	0/0:28,0:27:81.02:0,81,857	0/0:10,0:10:30.08:0,30,332
chr10	19581977	.	AC	A	6825.43	PASS	AB=0.895;AC=53;AF=0.946;AN=56;BaseQRankSum=-5.977;DP=413;FS=2.248;HRun=9;HaplotypeScore=51.0052;InbreedingCoeff=0.5647;MQ=78.16;MQ0=1;MQRankSum=-4.027;QD=17.64;ReadPosRankSum=4.478;VQSLOD=5.0014;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,25:31:60.02:549,60,0	1/1:0,2:2:6:55,6,0	0/0:26,0:21:39.98:0,40,317	0/1:15,1:6:24.33:25,0,24	1/1:1,13:14:41.99:376,42,0	1/1:0,7:7:15.01:137,15,0	1/1:6,20:26:46.83:417,47,0	1/1:3,3:16:29.21:121,29,0	1/1:2,8:10:14.99:137,15,0	1/1:4,9:13:29.38:255,29,0	1/1:3,8:11:20.96:184,21,0	1/1:3,12:15:33.01:301,33,0	1/1:5,13:18:26.69:246,27,0	1/1:0,14:14:21.01:192,21,0	1/1:4,19:23:47.98:439,48,0	1/1:1,17:18:42.01:384,42,0	1/1:1,16:17:39.02:357,39,0	1/1:3,11:14:27.01:247,27,0	1/1:0,9:9:26.05:226,26,0	1/1:5,10:15:30.01:274,30,0	1/1:4,18:22:16.41:405,16,0	1/1:0,10:10:23.96:211,24,0	1/1:4,10:14:21.01:192,21,0	1/1:3,9:12:24:219,24,0	1/1:1,8:9:24.01:219,24,0	1/1:3,8:11:24.01:219,24,0	1/1:2,12:14:36.02:329,36,0	1/1:0,4:4:12.01:110,12,0
chr10	19583813	.	GCC	G	9234.23	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=10.299;DP=550;FS=1.126;HRun=9;HaplotypeScore=69.9768;InbreedingCoeff=0.9992;MQ=80.70;MQ0=1;MQRankSum=-2.911;QD=28.15;ReadPosRankSum=5.307;VQSLOD=4.8259;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:54.17:0,54,863	0/0:12,0:12:36.11:0,36,565	0/0:16,0:16:28.90:0,29,401	0/0:19,0:17:33.09:0,33,481	0/0:12,0:12:36.11:0,36,562	1/1:1,18:19:45.13:524,45,0	1/1:2,22:24:51.14:594,51,0	0/0:28,0:29:60.12:0,60,819	0/0:25,0:25:72.23:0,72,1156	1/1:4,19:23:57.16:664,57,0	1/1:1,12:13:33.10:384,33,0	1/1:0,10:10:30.09:349,30,0	1/1:0,29:29:78.23:908,78,0	1/1:5,23:28:51.14:593,51,0	0/0:17,0:17:48.15:0,48,762	1/1:4,16:20:45.12:524,45,0	1/1:3,32:35:90.26:1048,90,0	1/1:0,11:11:27.08:315,27,0	1/1:3,10:13:30.05:327,30,0	1/1:2,14:16:39.11:454,39,0	1/1:3,24:27:63.18:734,63,0	1/1:2,16:18:54.16:628,54,0	1/1:3,16:19:44.79:524,45,0	1/1:3,20:23:57.16:664,57,0	0/0:9,0:9:24.07:0,24,372	0/0:18,0:18:42.14:0,42,687	0/0:16,0:19:48.16:0,48,750	0/0:20,0:21:53.61:0,54,748
chr10	19584133	.	A	ATT	858.75	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=-3.511;DP=603;FS=1.540;HRun=10;HaplotypeScore=77.6121;InbreedingCoeff=0.6976;MQ=67.63;MQ0=7;MQRankSum=-1.204;QD=19.08;ReadPosRankSum=-4.507;VQSLOD=1.7695;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:34:83.89:0,84,836	0/0:5,0:5:15.03:0,15,153	0/0:14,0:12:15.01:0,15,150	0/1:13,0:10:4.55:5,0,149	0/0:20,0:23:53.59:0,54,583	0/0:17,0:17:44.81:0,45,438	0/0:19,0:21:44.54:0,45,491	1/1:12,19:32:71.61:953,72,0	0/0:21,0:21:45.02:0,45,450	0/0:28,0:29:62.52:0,63,664	0/0:14,0:14:30.01:0,30,305	0/0:23,0:24:30.79:0,31,359	0/0:27,0:27:75.17:0,75,763	0/0:12,0:12:30.07:0,30,305	0/0:33,0:33:81.14:0,81,817	0/0:15,0:16:30.04:0,30,305	0/0:23,0:20:54.11:0,54,549	0/0:29,0:28:69.15:0,69,701	0/0:24,0:25:65.82:0,66,639	0/0:21,0:23:42.05:0,42,427	0/0:24,0:24:45.06:0,45,454	0/0:18,0:19:50.83:0,51,500	0/0:12,0:12:33.07:0,33,336	0/0:21,0:21:51.11:0,51,519	0/0:25,0:24:60.12:0,60,610	0/0:26,0:26:60.05:0,60,599	0/0:25,0:25:61.19:0,61,592	0/0:15,0:15:35.94:0,36,366
chr10	19584620	.	CT	C	7555.31	PASS	AB=0.880;AC=37;AF=0.661;AN=56;BaseQRankSum=9.469;DP=645;FS=3.599;HRun=11;HaplotypeScore=66.8899;InbreedingCoeff=0.8604;MQ=69.01;MQ0=3;MQRankSum=2.416;QD=16.68;ReadPosRankSum=1.135;VQSLOD=5.9331;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,3:51:55.78:0,56,1169	0/0:15,1:16:5.43:0,5,263	0/0:12,0:12:11.57:0,12,100	0/0:4,1:5:1.91:0,2,36	0/0:25,0:27:62.81:0,63,623	1/1:4,20:24:56.91:468,57,0	1/1:6,16:21:44.94:369,45,0	1/1:16,17:34:23.95:393,24,0	0/0:26,0:26:64.37:0,64,653	1/1:4,23:28:64.91:521,65,0	1/1:4,14:18:35.93:296,36,0	1/1:5,16:22:43.97:351,44,0	1/1:2,28:31:79.94:646,80,0	1/1:6,20:28:58.17:475,58,0	1/1:2,22:24:62.92:517,63,0	1/1:6,23:29:36.97:510,37,0	1/1:1,20:22:58.97:474,59,0	1/1:3,13:16:27.05:305,27,0	1/1:3,16:20:43.89:342,44,0	1/1:1,18:19:47.92:394,48,0	1/1:2,18:21:40.92:319,41,0	1/1:7,16:22:35.91:296,36,0	1/1:4,12:16:23.78:197,24,0	1/1:4,30:34:73.29:655,73,0	0/0:20,0:21:53.92:0,54,539	0/1:19,3:21:28.83:29,0,338	0/0:26,2:28:32.43:0,32,520	0/0:6,0:5:15.04:0,15,160
chr10	19584881	.	TTTA	T	847.04	PASS	AB=1.000;AC=4;AF=0.071;AN=56;BaseQRankSum=6.570;DP=574;FS=0.708;HRun=0;HaplotypeScore=82.3303;InbreedingCoeff=0.4715;MQ=68.35;MQ0=1;MQRankSum=-1.275;QD=16.61;ReadPosRankSum=-3.898;VQSLOD=2.3878;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,99,1684	0/0:5,0:5:14.98:0,15,254	0/1:11,0:10:14.72:15,0,266	0/1:13,0:13:11.40:11,0,351	0/0:29,0:29:84.22:0,84,1493	0/0:26,0:26:78.14:0,78,1318	0/0:19,0:19:57.15:0,57,1016	1/1:4,23:27:72.07:933,72,0	0/0:25,0:25:75.20:0,75,1365	0/0:25,0:25:75.22:0,75,1385	0/0:17,0:17:51.16:0,51,912	0/0:16,0:16:45.10:0,45,781	0/0:26,0:26:62.14:0,62,1202	0/0:21,0:21:63.13:0,63,1127	0/0:21,0:21:63.11:0,63,1118	0/0:14,0:14:42.10:0,42,708	0/0:33,0:33:96.20:0,96,1671	0/0:17,0:17:42.04:0,42,727	0/0:19,0:19:45.85:0,46,790	0/0:26,0:26:71.91:0,72,1118	0/0:12,0:12:32.85:0,33,520	0/0:16,0:16:42.09:0,42,755	0/0:19,0:19:54.12:0,54,949	0/0:23,0:23:69.19:0,69,1242	0/0:27,0:27:81.20:0,81,1391	0/0:22,0:22:66.22:0,66,1168	0/0:18,0:18:51.15:0,51,967	0/0:11,0:11:30.03:0,30,466
chr10	19585105	.	ATAGGCACTG	A	1302.71	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.595;DP=613;FS=3.420;HRun=0;HaplotypeScore=165.0994;InbreedingCoeff=0.9958;MQ=90.46;MQ0=0;MQRankSum=-5.956;QD=62.03;ReadPosRankSum=-1.907;VQSLOD=3.3176;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:96.30:0,96,4308	0/0:15,0:15:45.15:0,45,2126	0/0:26,0:26:69.20:0,69,2827	0/0:27,0:27:73.98:0,74,3169	0/0:20,0:20:60.21:0,60,2709	0/0:27,0:27:81.23:0,81,3786	0/0:20,0:20:60.21:0,60,2833	1/1:5,16:21:48.12:1398,48,0	0/0:22,0:22:63.22:0,63,2820	0/0:15,0:15:45.15:0,45,1982	0/0:17,0:17:51.16:0,51,2359	0/0:22,0:22:66.23:0,66,3187	0/0:34,0:34:99:0,102,4778	0/0:27,0:27:81.28:0,81,3776	0/0:25,0:25:72.25:0,72,3399	0/0:22,0:22:66.23:0,66,2926	0/0:28,0:28:75.24:0,75,3493	0/0:20,0:20:57.18:0,57,2428	0/0:21,0:21:63.22:0,63,3046	0/0:22,0:22:63.22:0,63,3021	0/0:29,0:29:87.27:0,87,3884	0/0:13,0:13:36.12:0,36,1750	0/0:18,0:18:54.19:0,54,2507	0/0:13,0:13:39.09:0,39,1739	0/0:28,0:28:72.25:0,72,3502	0/0:21,0:21:54.19:0,54,2502	0/0:18,0:18:54.19:0,54,2490	0/0:9,0:9:21.07:0,21,823
chr10	19585876	.	CGT	C	4630.82	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=0.399;DP=609;FS=8.131;HRun=0;HaplotypeScore=120.7055;InbreedingCoeff=0.8520;MQ=59.98;MQ0=9;MQRankSum=-0.399;QD=14.16;ReadPosRankSum=1.045;VQSLOD=4.5528;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,106,1170	0/0:14,0:14:31.96:0,32,266	0/0:19,0:3:5.44:0,5,66	0/0:31,0:8:9.23:0,9,153	0/0:30,0:30:55.86:0,56,568	1/1:17,0:17:3.10:101,3,0	1/1:30,0:30:41.32:386,41,0	1/1:19,0:19:45.04:558,45,0	0/0:25,0:25:64.78:0,65,681	1/1:19,1:20:47.41:464,47,0	1/1:11,0:11:7.32:98,7,0	1/1:23,0:23:10.57:168,11,0	1/1:31,0:31:1.09:227,1,0	1/1:15,0:15:17.49:236,17,0	0/0:33,0:33:76.37:0,76,620	1/1:12,0:12:9.45:102,9,0	1/1:18,0:18:28.89:288,29,0	1/1:26,2:28:19.28:180,19,0	1/1:1,11:12:34.92:439,35,0	1/1:14,0:14:35.74:413,36,0	1/1:20,0:20:10.25:106,10,0	1/1:0,14:14:24.08:336,24,0	1/1:18,1:19:2.65:324,3,0	1/1:24,0:24:9.65:205,10,0	0/0:27,0:27:44.48:0,44,471	0/0:28,0:27:35.86:0,36,841	0/0:16,0:16:43.48:0,43,492	0/0:12,0:12:20.51:0,21,270
chr10	19585880	.	T	TACAC	2363.11	PASS	AB=0.798;AC=21;AF=0.375;AN=56;BaseQRankSum=2.772;DP=633;FS=11.263;HRun=0;HaplotypeScore=154.3730;InbreedingCoeff=0.0604;MQ=58.66;MQ0=12;MQRankSum=-3.420;QD=7.43;ReadPosRankSum=-0.552;VQSLOD=1.9678;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,108,2201	0/0:16,0:16:33.11:0,33,683	0/0:19,0:3:7.58:0,8,117	0/0:34,0:7:5.91:0,6,173	0/0:27,0:27:57.19:0,57,1177	0/1:6,10:18:23.72:165,0,24	1/1:20,5:26:1.48:291,1,0	0/1:1,0:22:22.18:22,0,139	0/0:25,0:25:66.12:0,66,1367	0/1:16,1:19:43.16:210,0,43	1/1:8,3:12:0.07:51,0,0	0/1:22,0:23:21.57:29,0,22	0/1:28,0:29:22.46:22,0,74	1/1:10,5:15:3.78:265,4,0	0/0:36,0:36:78.26:0,78,1616	1/1:3,7:11:2.16:148,2,0	0/1:9,9:19:18.81:234,0,19	0/1:4,18:27:19.26:414,0,19	0/1:15,0:15:2.08:151,0,2	1/1:14,1:16:5.31:266,5,0	0/1:11,0:22:9.19:37,0,9	0/0:16,0:16:24.01:0,24,210	0/1:16,1:17:42.97:53,0,43	0/1:8,15:27:1.28:166,0,1	0/0:34,0:34:44.83:0,45,943	0/0:28,0:27:70.12:0,70,1392	0/0:20,0:19:44.95:0,45,903	0/0:13,0:13:24.08:0,24,468
chr10	19585881	.	G	GCA	1159.33	PASS	AB=0.969;AC=17;AF=0.304;AN=56;BaseQRankSum=8.634;DP=636;FS=16.426;HRun=0;HaplotypeScore=144.8292;InbreedingCoeff=-0.1047;MQ=56.70;MQ0=12;MQRankSum=-3.939;QD=3.92;ReadPosRankSum=1.477;VQSLOD=2.1547;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,108,1594	0/0:16,0:16:33.11:0,33,499	0/0:19,0:3:8.96:0,9,88	0/0:32,0:5:7.38:0,7,124	0/0:27,0:27:57.17:0,57,840	0/1:17,0:17:0.73:80,0,1	0/1:26,0:26:10.19:176,0,10	0/0:23,0:23:6.11:0,6,180	0/0:25,0:25:66.22:0,66,1006	0/1:20,0:20:58.31:114,0,58	0/1:13,0:13:5.61:46,0,6	0/1:24,0:24:21.49:32,0,21	0/1:13,16:29:46.87:47,0,90	1/1:15,0:15:0.64:131,1,0	0/0:37,0:37:78.24:0,78,1171	1/1:10,0:10:1.95:61,2,0	0/1:19,0:20:10.39:99,0,10	0/1:25,0:25:23.30:217,0,23	0/1:16,0:16:32.96:84,0,33	0/1:15,0:15:30.77:99,0,31	0/1:22,0:22:21.29:36,0,21	0/0:16,0:16:23.54:0,24,143	0/1:18,0:18:12.40:12,0,34	0/1:26,0:26:9.47:81,0,9	0/0:34,0:34:48.14:0,48,700	0/0:28,0:27:72.38:0,72,1072	0/0:21,0:20:45.06:0,45,642	0/0:14,0:14:22.36:0,22,347
chr10	19585882	.	TAC	T	2984.73	PASS	AB=0.586;AC=19;AF=0.352;AN=54;BaseQRankSum=-8.336;DP=686;FS=0.491;HRun=0;HaplotypeScore=145.5130;InbreedingCoeff=0.8305;MQ=53.38;MQ0=13;MQRankSum=6.313;QD=11.05;ReadPosRankSum=2.398;VQSLOD=3.3731;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:22,23:47:32:530,32,0	1/1:4,12:16:24.07:269,24,0	./.	0/0:31,0:4:5.89:0,6,61	1/1:10,16:27:30.39:317,30,0	0/0:24,0:23:13.64:0,14,108	0/0:29,0:29:30.01:0,30,316	1/1:23,0:23:17.20:193,17,0	1/1:10,14:25:35.83:384,36,0	0/0:28,0:28:63.04:0,63,554	0/0:20,0:20:11.06:0,11,114	0/0:16,0:26:10.98:0,11,95	0/0:28,0:28:17.87:0,18,197	0/0:19,0:19:18.94:0,19,144	1/1:7,27:35:60:653,60,0	0/0:14,0:14:11.02:0,11,80	0/0:22,0:22:12.72:0,13,78	0/0:28,0:28:39.93:0,40,323	0/0:16,0:16:8.95:0,9,82	0/0:21,0:21:17.86:0,18,171	0/0:22,0:22:6.01:0,6,72	0/0:16,0:16:17.76:0,18,56	0/0:18,0:24:8.88:0,9,73	0/0:28,0:28:25.13:0,25,173	0/1:10,21:34:14.17:234,0,14	1/1:15,13:27:32.86:326,33,0	1/1:10,10:19:18.05:202,18,0	1/1:7,7:14:8.85:81,9,0
chr10	19586369	.	ATT	A	11506.80	PASS	AB=0.579;AC=33;AF=0.589;AN=56;BaseQRankSum=8.045;DP=706;FS=0.946;HRun=10;HaplotypeScore=118.8023;InbreedingCoeff=0.9254;MQ=70.68;MQ0=0;MQRankSum=-0.053;QD=27.14;ReadPosRankSum=2.374;VQSLOD=4.5225;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:63,0:63:99:0,171,2567	0/0:19,0:19:45.15:0,45,714	0/0:16,0:15:25.44:0,25,370	0/0:10,0:10:21.01:0,21,269	0/0:30,0:30:87.29:0,87,1357	1/1:2,16:18:42.11:468,42,0	1/1:5,19:24:42.10:468,42,0	1/1:9,23:32:69.12:759,69,0	0/0:19,0:19:54.17:0,54,835	1/1:2,20:23:62.90:681,63,0	1/1:0,18:18:51.14:568,51,0	1/1:3,24:28:74.93:815,75,0	1/1:3,24:27:63.16:702,63,0	1/1:4,17:21:48.12:535,48,0	0/0:25,0:26:75.25:0,75,1171	1/1:2,23:25:65.76:735,66,0	1/1:0,35:35:96.26:1070,96,0	0/1:6,16:22:41.10:481,0,41	1/1:5,24:29:69.17:769,69,0	1/1:0,24:24:69.17:766,69,0	1/1:3,21:24:54.14:602,54,0	1/1:1,23:24:66.16:736,66,0	1/1:2,20:22:57.14:635,57,0	1/1:1,26:28:65.91:714,66,0	0/0:20,0:19:57.16:0,57,859	0/0:29,0:31:80.25:0,80,1206	0/0:30,0:32:95.24:0,95,1347	0/0:15,0:16:48.16:0,48,738
chr10	19589051	.	G	GC	25568.29	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-9.788;DP=726;FS=0.594;HRun=3;HaplotypeScore=66.3804;InbreedingCoeff=0.9956;MQ=85.12;MQ0=0;MQRankSum=-10.729;QD=37.49;ReadPosRankSum=6.869;VQSLOD=4.2828;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,35:36:99:1428,102,0	1/1:0,8:8:17.86:252,18,0	0/0:25,0:25:72.13:0,72,809	0/0:19,0:19:50.96:0,51,529	1/1:1,19:20:45.15:621,45,0	1/1:0,25:25:72.24:1008,72,0	1/1:2,22:24:60.20:828,60,0	1/1:2,28:30:84.24:1123,84,0	1/1:1,30:31:90.30:1260,90,0	1/1:2,26:28:78.23:1071,78,0	1/1:2,19:21:51.17:714,51,0	1/1:2,30:32:78.26:1079,78,0	1/1:1,28:29:84.28:1170,84,0	1/1:1,18:19:51.17:714,51,0	1/1:1,31:32:87.29:1218,87,0	1/1:1,32:33:90.30:1261,90,0	1/1:2,36:38:93.31:1302,93,0	1/1:1,26:27:75.25:1050,75,0	1/1:1,18:19:54.15:731,54,0	1/1:0,23:23:63.17:859,63,0	1/1:0,49:49:99:1848,132,0	1/1:1,28:29:75.25:1049,75,0	1/1:0,15:15:38.80:546,39,0	1/1:1,20:21:57.19:798,57,0	1/1:0,19:19:57.19:798,57,0	1/1:3,31:34:99:1370,99,0	1/1:1,25:26:66.22:923,66,0	1/1:0,14:14:39.13:546,39,0
chr10	19590191	.	G	GA	8047.21	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=-4.939;DP=460;FS=2.117;HRun=7;HaplotypeScore=61.8269;InbreedingCoeff=0.9959;MQ=72.57;MQ0=0;MQRankSum=-3.854;QD=31.43;ReadPosRankSum=0.808;VQSLOD=5.0866;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:60.07:0,60,572	0/0:7,0:7:21.03:0,21,202	0/0:12,0:12:23.82:0,24,226	0/0:10,1:11:20.23:0,20,167	0/0:27,0:27:71.97:0,72,675	1/1:0,20:20:57.17:688,57,0	1/1:2,16:18:48.15:580,48,0	0/0:32,0:32:81.11:0,81,774	0/0:18,0:18:54.08:0,54,516	1/1:5,14:19:48.14:565,48,0	1/1:4,20:24:69.19:812,69,0	1/1:2,23:25:75.22:891,75,0	1/1:2,11:13:33.10:395,33,0	1/1:5,13:18:42.13:507,42,0	0/0:14,0:14:42.07:0,42,405	1/1:0,12:12:36.11:435,36,0	1/1:1,11:12:27.08:326,27,0	1/1:6,15:21:57.11:655,57,0	1/1:6,14:20:48.13:560,48,0	1/1:2,9:11:33.03:359,33,0	1/1:3,4:7:18.06:217,18,0	1/1:3,10:13:36.09:415,36,0	1/1:2,11:13:36.10:425,36,0	1/1:1,9:10:18.06:218,18,0	0/0:20,0:20:60.07:0,60,568	0/0:14,0:14:33.04:0,33,314	0/0:15,0:15:42.05:0,42,399	0/0:12,0:12:36.05:0,36,343
chr10	19590248	.	GA	G	12349.44	PASS	AB=1.000;AC=53;AF=0.946;AN=56;BaseQRankSum=-1.471;DP=498;FS=1.292;HRun=8;HaplotypeScore=63.4859;InbreedingCoeff=0.6728;MQ=73.47;MQ0=0;MQRankSum=-5.138;QD=25.31;ReadPosRankSum=3.487;VQSLOD=5.6520;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,26:27:72.11:695,72,0	1/1:0,13:13:36.06:348,36,0	0/1:11,0:10:8.65:9,0,137	0/0:10,0:10:12.04:0,12,145	1/1:0,33:33:96.15:927,96,0	1/1:1,17:18:48.07:463,48,0	1/1:0,12:12:36.06:348,36,0	1/1:1,29:30:87.12:833,87,0	1/1:1,19:20:57.09:550,57,0	1/1:0,20:20:60.07:572,60,0	1/1:5,15:20:48.07:462,48,0	1/1:0,21:21:57.09:550,57,0	1/1:3,14:17:42.07:405,42,0	1/1:3,14:17:42.07:406,42,0	1/1:2,12:14:36.06:348,36,0	1/1:5,6:11:24.01:225,24,0	1/1:1,19:20:54.08:521,54,0	1/1:2,27:29:69.11:666,69,0	1/1:2,15:17:45.06:429,45,0	1/1:3,12:15:36.06:347,36,0	1/1:0,8:8:24.04:232,24,0	1/1:1,11:12:33.05:319,33,0	1/1:0,12:12:33.05:319,33,0	1/1:0,11:11:30.04:290,30,0	1/1:0,28:28:81.13:782,81,0	1/1:2,15:17:45.07:435,45,0	1/1:0,20:20:51.08:492,51,0	1/1:0,15:15:39.06:377,39,0
chr10	19590550	.	AT	A	8503.78	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=11.758;DP=592;FS=3.375;HRun=9;HaplotypeScore=57.8524;InbreedingCoeff=0.9692;MQ=75.11;MQ0=0;MQRankSum=-0.289;QD=22.50;ReadPosRankSum=3.434;VQSLOD=5.8223;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,99,1119	0/0:8,0:8:24.05:0,24,264	0/0:15,0:14:21:0,21,207	0/0:14,0:13:28.77:0,29,271	0/0:24,0:24:69.19:0,69,787	1/1:3,12:15:1.99:219,2,0	1/1:2,20:22:48.02:439,48,0	1/1:1,26:27:75.01:677,75,0	0/0:16,0:16:42.12:0,42,485	1/1:2,15:17:45.02:412,45,0	1/1:0,16:16:45.02:411,45,0	1/1:5,23:28:57.02:522,57,0	1/1:3,19:22:51.03:467,51,0	1/1:4,23:27:57.02:522,57,0	0/0:20,0:20:51.09:0,51,556	1/1:2,11:13:33.02:302,33,0	1/1:0,27:27:72.04:659,72,0	1/1:0,35:35:99:934,102,0	1/1:5,23:28:58.55:584,59,0	1/1:1,17:18:51.03:467,51,0	1/1:1,22:23:60.03:549,60,0	1/1:1,8:9:19.04:189,19,0	1/1:1,21:22:57.03:522,57,0	1/1:2,27:29:69.04:631,69,0	0/0:16,0:16:45.13:0,45,519	0/0:30,1:31:50.76:0,51,834	0/0:19,0:16:48.13:0,48,542	0/0:16,0:16:48.14:0,48,554
chr10	19591956	.	CTTCTTTTTTTTTTTTTTTTTT	C	4046.06	PASS	AB=0.773;AC=30;AF=0.536;AN=56;BaseQRankSum=2.009;DP=425;FS=27.251;HRun=0;HaplotypeScore=200.2787;InbreedingCoeff=0.8377;MQ=64.01;MQ0=20;MQRankSum=3.035;QD=20.13;ReadPosRankSum=3.147;VQSLOD=1.3124;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:23:66.07:0,66,3732	0/0:5,0:4:12:0,12,363	0/0:25,0:7:17.96:0,18,295	0/0:40,0:15:38.94:0,39,745	0/0:18,0:17:42.64:0,43,2503	1/1:14,0:14:34.15:340,34,0	1/1:16,0:15:42.03:381,42,0	0/0:22,0:21:51.56:0,52,1670	0/0:10,0:10:23.99:0,24,1271	1/1:10,0:10:30.03:281,30,0	0/1:2,10:12:99:116,0,165	1/1:14,0:13:39.04:356,39,0	1/1:9,0:9:20.96:177,21,0	1/1:13,0:13:9.82:232,10,0	0/0:10,0:10:27.03:0,27,1316	1/1:14,0:13:25.83:263,26,0	1/1:17,0:15:14.17:262,14,0	1/1:11,0:10:27.01:238,27,0	0/1:17,0:16:99:207,0,121	1/1:12,0:11:32.91:295,33,0	1/1:8,0:7:17.35:134,17,0	1/1:10,0:10:24.02:217,24,0	1/1:12,0:12:24.74:262,25,0	1/1:12,0:12:31.44:285,31,0	0/0:15,0:15:42.02:0,42,2359	0/0:29,0:27:77.76:0,78,3670	0/0:16,0:17:45.10:0,45,2608	0/0:9,0:8:21.01:0,21,891
chr10	19591958	.	TC	T	4275.92	PASS	AB=1.000;AC=33;AF=0.589;AN=56;BaseQRankSum=1.383;DP=429;FS=3.569;HRun=1;HaplotypeScore=52.7455;InbreedingCoeff=0.8985;MQ=61.96;MQ0=23;MQRankSum=1.109;QD=20.76;ReadPosRankSum=-2.067;VQSLOD=4.3840;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:24:20.31:0,20,402	0/0:5,0:4:8.19:0,8,68	0/0:23,1:6:14.84:0,15,119	0/0:37,2:14:34:0,34,267	0/0:20,0:19:25.68:0,26,262	1/1:14,0:14:39.46:343,39,0	1/1:15,0:14:42.03:381,42,0	0/0:24,0:23:30.14:0,30,381	0/0:9,0:8:23.94:0,24,203	1/1:11,0:10:30.03:281,30,0	1/1:11,0:11:17.29:134,17,0	1/1:14,0:13:39.04:357,39,0	1/1:8,0:8:20.96:178,21,0	1/1:12,0:12:15.65:241,16,0	0/1:10,0:10:6.09:6,0,144	1/1:13,0:12:30.47:271,30,0	1/1:16,0:14:39.34:318,39,0	1/1:12,0:10:27.01:238,27,0	1/1:7,8:14:41.82:335,42,0	1/1:12,0:11:32.90:271,33,0	1/1:8,0:7:17.98:154,18,0	1/1:9,0:9:24.02:217,24,0	1/1:12,0:12:29.98:261,30,0	1/1:14,0:14:32.82:288,33,0	0/0:20,0:20:33.20:0,33,336	0/0:30,0:28:4.46:0,4,453	0/0:19,0:19:24.80:0,25,311	0/0:8,0:7:13.52:0,14,123
chr10	19592333	.	AC	A	556.67	PASS	AB=0.929;AC=3;AF=0.054;AN=56;BaseQRankSum=-1.762;DP=540;FS=6.860;HRun=10;HaplotypeScore=100.8144;InbreedingCoeff=0.4580;MQ=71.16;MQ0=0;MQRankSum=1.477;QD=12.65;ReadPosRankSum=2.278;VQSLOD=3.3375;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,1:34:51.98:0,52,756	0/0:8,0:8:15.02:0,15,149	0/0:23,1:17:24.31:0,24,236	0/0:21,0:17:21.66:0,22,279	0/1:12,1:13:4.99:5,0,178	0/0:8,0:9:11.97:0,12,103	0/0:11,0:22:17.67:0,18,148	0/0:20,0:21:21.02:0,21,206	0/0:21,1:22:51.03:0,51,524	0/0:14,1:15:0.88:0,1,220	0/0:17,0:17:29.76:0,30,325	0/0:20,3:23:19.02:0,19,407	0/0:25,0:25:7.87:0,8,414	0/0:18,0:18:41.90:0,42,411	1/1:5,26:31:74.97:650,75,0	0/0:16,1:17:13.03:0,13,360	0/0:25,0:25:60.13:0,60,651	0/0:10,0:10:16.88:0,17,197	0/0:5,0:10:17.37:0,17,99	0/0:14,1:15:32.94:0,33,321	0/0:18,0:17:36.07:0,36,389	0/0:14,2:16:30.02:0,30,297	0/0:18,1:19:21.17:0,21,260	0/0:24,0:24:63.13:0,63,667	0/0:13,1:14:1.03:0,1,225	0/0:21,0:21:45.07:0,45,461	0/0:24,1:24:54.10:0,54,571	0/0:22,1:23:31.08:0,31,562
chr10	19592870	.	TAC	T	2911.43	PASS	AB=0.978;AC=23;AF=0.426;AN=54;BaseQRankSum=-0.717;DP=798;FS=4.853;HRun=0;HaplotypeScore=197.7658;InbreedingCoeff=0.5876;MQ=55.47;MQ0=22;MQRankSum=3.030;QD=8.20;ReadPosRankSum=3.216;VQSLOD=3.2919;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:28,14:42:59.21:624,59,0	1/1:3,8:11:18.05:205,18,0	0/0:29,0:11:3.01:0,3,32	./.	0/0:28,2:30:14.52:0,15,579	0/0:27,0:28:21.46:0,21,212	0/0:33,0:33:5.90:0,6,40	0/1:28,1:30:4.73:37,0,5	1/1:5,14:21:29.56:300,30,0	0/0:18,0:38:49.88:0,50,351	0/0:26,0:27:8.43:0,8,69	0/0:33,0:34:20.43:0,20,166	0/1:27,0:30:5.99:6,0,73	0/0:23,0:25:9.39:0,9,73	1/1:20,21:41:45.25:467,45,0	0/0:31,0:33:37.43:0,37,357	1/1:15,0:16:2.96:19,3,0	0/1:20,0:20:2.57:3,0,90	0/1:20,0:18:1.59:2,0,98	0/0:18,0:30:10.56:0,11,61	0/0:36,0:35:15.85:0,16,141	0/0:18,0:31:5.54:0,6,36	0/0:22,0:23:6:0,6,52	0/1:27,0:28:10.73:11,0,28	1/1:10,16:27:42.11:466,42,0	1/1:11,17:29:44.54:445,45,0	1/1:15,9:24:36.30:382,36,0	1/1:5,4:8:12.03:136,12,0
chr10	19593904	.	T	TA	2245.44	PASS	AC=14;AF=0.269;AN=52;BaseQRankSum=10.722;DP=280;FS=10.761;HRun=6;HaplotypeScore=33.8396;InbreedingCoeff=0.8889;MQ=67.73;MQ0=0;MQRankSum=-0.092;QD=28.79;ReadPosRankSum=2.082;VQSLOD=3.2657;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,6:8:18.06:226,18,0	1/1:1,6:7:12.04:151,12,0	0/0:3,0:3:5.97:0,6,50	0/0:4,0:3:3.01:0,3,30	1/1:0,8:8:24.01:282,24,0	0/0:13,0:13:39.09:0,39,398	0/0:5,0:5:12.03:0,12,122	0/0:35,0:35:93.16:0,93,933	0/0:8,0:8:21.05:0,21,214	0/0:8,0:8:24.05:0,24,245	0/0:4,0:4:12.03:0,12,122	0/0:11,0:11:30.05:0,30,299	0/0:5,0:5:15.02:0,15,146	0/0:2,0:2:3.01:0,3,31	./.	0/0:5,0:5:15.03:0,15,153	0/0:32,0:32:90.17:0,90,903	0/0:13,0:13:36.06:0,36,359	0/0:22,0:22:60.13:0,60,612	0/0:6,0:6:18.04:0,18,184	0/0:8,0:8:24.05:0,24,245	./.	0/0:7,0:7:18.04:0,18,183	0/0:9,0:9:27.06:0,27,275	1/1:2,7:9:21.07:264,21,0	1/1:1,10:11:30.10:377,30,0	1/1:0,10:10:27.09:340,27,0	1/1:0,25:25:63.20:792,63,0
chr10	19594452	.	TC	T	1198.46	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.331;DP=673;FS=3.126;HRun=2;HaplotypeScore=61.5047;InbreedingCoeff=0.9958;MQ=85.93;MQ0=0;MQRankSum=-2.059;QD=34.24;ReadPosRankSum=-3.694;VQSLOD=2.4104;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:58:99:0,163,2402	0/0:8,0:8:24.08:0,24,360	0/0:26,0:26:75.25:0,75,1096	0/0:18,0:18:42.61:0,43,608	0/0:30,0:30:87.29:0,87,1291	0/0:24,0:24:72.24:0,72,1078	0/0:27,0:27:78.24:0,78,1125	1/1:1,34:35:99:1293,102,0	0/0:20,0:20:60.20:0,60,899	0/0:28,0:28:84.28:0,84,1253	0/0:14,0:14:42.14:0,42,628	0/0:33,0:33:99:0,99,1444	0/0:20,0:20:54.18:0,54,799	0/0:34,0:34:99:0,99,1436	0/0:23,0:23:69.22:0,69,1012	0/0:27,0:27:75.23:0,75,1084	0/0:21,0:21:63.21:0,63,938	0/0:20,0:20:57.19:0,57,854	0/0:27,0:27:78.26:0,78,1144	0/0:17,0:17:51.17:0,51,762	0/0:40,0:40:99:0,111,1662	0/0:21,0:21:60.20:0,60,894	0/0:9,0:9:24.08:0,24,360	0/0:23,0:22:69.23:0,69,1033	0/0:14,0:14:39.13:0,39,584	0/0:28,0:28:84.28:0,84,1259	0/0:15,0:15:45.14:0,45,648	0/0:13,0:13:39.13:0,39,581
chr10	19596282	.	G	GA	10284.46	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=-19.270;DP=753;FS=6.550;HRun=9;HaplotypeScore=105.9379;InbreedingCoeff=0.9945;MQ=70.07;MQ0=0;MQRankSum=0.051;QD=23.53;ReadPosRankSum=2.458;VQSLOD=4.7909;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:29:86.02:0,86,733	0/0:16,0:16:41.99:0,42,364	0/0:17,0:17:35.93:0,36,300	0/0:10,0:10:29.70:0,30,237	0/0:34,0:34:83.96:0,84,728	1/1:5,22:27:54.15:597,54,0	1/1:2,17:19:13.05:372,13,0	0/0:30,0:29:77.96:0,78,672	0/0:29,0:29:68.98:0,69,599	1/1:4,22:27:68.99:726,69,0	1/1:5,19:26:62.84:659,63,0	1/1:6,28:35:23.08:701,23,0	1/1:5,26:31:69.19:763,69,0	1/1:5,24:29:55.15:815,55,0	0/0:29,0:29:74.54:0,75,628	1/1:5,20:24:27.99:521,28,0	1/1:3,27:31:63:677,63,0	1/1:3,20:23:17.86:400,18,0	1/1:3,19:22:31.09:562,31,0	1/1:5,26:32:78.14:834,78,0	1/1:2,25:27:66.18:730,66,0	1/1:3,26:30:74.91:770,75,0	1/1:6,22:28:48.13:527,48,0	1/1:2,23:25:57.15:631,57,0	0/0:27,1:28:47.79:0,48,644	0/0:35,2:37:24.37:0,24,658	0/0:39,0:39:99:0,101,864	0/0:18,0:18:50.80:0,51,416
chr10	19596927	.	TA	T	7095.10	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=17.590;DP=605;FS=3.956;HRun=2;HaplotypeScore=84.2710;InbreedingCoeff=0.9948;MQ=85.47;MQ0=0;MQRankSum=-9.842;QD=33.15;ReadPosRankSum=-1.496;VQSLOD=4.2869;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,26:26:63.20:817,63,0	1/1:0,9:9:27.09:350,27,0	0/0:22,0:22:63.19:0,63,910	0/0:21,0:21:57.19:0,57,837	1/1:0,29:29:75.24:973,75,0	0/0:18,0:18:54.18:0,54,809	0/0:15,0:15:45.15:0,45,675	1/1:0,30:30:87.26:1105,87,0	0/0:16,0:16:45.15:0,45,673	0/0:27,0:27:78.26:0,78,1169	0/0:14,0:14:42.14:0,42,630	0/0:22,0:22:63.21:0,63,943	0/0:32,0:32:93.31:0,93,1376	0/0:22,0:22:63.20:0,63,922	1/1:0,24:24:60.20:778,60,0	0/0:23,0:23:66.22:0,66,989	0/0:26,0:26:75.24:0,75,1103	0/0:15,0:15:45.15:0,45,657	0/0:19,0:19:57.19:0,57,855	0/0:32,0:32:96.33:0,96,1439	0/0:26,0:26:75.25:0,75,1123	0/0:9,0:9:27.08:0,27,385	0/0:18,0:18:51.16:0,51,764	0/0:14,0:14:42.14:0,42,630	1/1:2,26:28:69.22:896,69,0	1/1:1,23:24:66.21:853,66,0	1/1:4,34:38:90.29:1167,90,0	1/1:0,6:6:12.04:156,12,0
chr10	19597031	.	T	TG	1521.86	PASS	AB=0.720;AC=15;AF=0.268;AN=56;BaseQRankSum=10.236;DP=432;FS=2.285;HRun=0;HaplotypeScore=88.2265;InbreedingCoeff=0.7463;MQ=80.94;MQ0=1;MQRankSum=-9.712;QD=12.79;ReadPosRankSum=-3.018;VQSLOD=3.8689;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:9,6:15:20.13:229,20,0	1/1:1,3:4:11.95:102,12,0	0/0:20,0:18:19.82:0,20,353	0/0:30,0:22:31.37:0,31,331	1/1:8,5:12:8.69:141,9,0	0/0:14,0:14:30.10:0,30,418	0/0:18,0:18:48.13:0,48,621	0/1:17,9:25:33.58:303,0,34	0/0:7,0:7:21.07:0,21,292	0/0:19,0:19:48.15:0,48,657	0/0:16,0:16:45.04:0,45,554	0/0:7,0:7:15.05:0,15,208	0/0:21,0:21:63.19:0,63,845	0/0:12,0:12:30.10:0,30,406	1/1:5,10:15:35.38:306,35,0	0/0:20,0:20:57.19:0,57,792	0/0:28,0:28:72.24:0,72,999	0/0:7,0:7:21.07:0,21,292	0/0:22,0:22:60.20:0,60,833	0/0:28,0:28:81.18:0,81,1071	0/0:9,0:9:27.08:0,27,361	0/0:11,0:11:30.09:0,30,395	0/0:13,0:13:36.11:0,36,480	0/0:7,0:7:15.05:0,15,209	1/1:4,6:10:15.53:167,16,0	0/1:6,3:9:8.13:74,0,8	1/1:16,9:25:33.30:366,33,0	0/1:1,1:2:2.75:23,0,3
chr10	19597033	.	A	AAAAGGAC	6262.21	PASS	AB=0.765;AC=12;AF=0.214;AN=56;BaseQRankSum=11.564;DP=458;FS=6.456;HRun=0;HaplotypeScore=143.7951;InbreedingCoeff=0.0842;MQ=77.89;MQ0=1;MQRankSum=-10.641;QD=37.28;ReadPosRankSum=-2.345;VQSLOD=3.7886;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:11,6:17:20.94:584,0,21	1/1:1,3:4:9.03:294,9,0	0/1:22,0:19:2.20:2,0,484	0/0:33,0:23:3.91:0,4,504	0/1:12,5:16:14.15:462,0,14	0/0:14,0:14:30.10:0,30,771	0/0:16,0:16:39.13:0,39,924	0/1:28,9:36:99:1607,0,170	0/0:7,0:7:21.06:0,21,490	0/0:18,0:18:51.15:0,51,1174	0/0:16,0:16:36.12:0,36,898	0/0:7,0:7:15.05:0,15,386	0/0:20,0:20:57.20:0,57,1428	0/0:12,0:12:33.10:0,33,797	0/1:8,10:18:49.98:1207,0,50	0/0:20,0:20:57.20:0,57,1449	0/0:28,0:28:75.20:0,75,1820	0/0:7,0:7:21.07:0,21,502	0/0:22,0:22:66.21:0,66,1548	0/0:29,0:29:81.23:0,81,1941	0/0:9,0:9:24.08:0,24,614	0/0:10,0:10:27.09:0,27,674	0/0:14,0:14:39.08:0,39,829	0/0:7,0:7:15.05:0,15,381	1/1:6,6:12:2.40:652,2,0	0/1:8,3:11:84.62:347,0,85	0/1:18,9:27:99:1014,0,157	0/1:1,1:2:17.88:93,0,18
chr10	19597051	.	TAGAC	T	1617.17	PASS	AB=1.000;AC=13;AF=0.241;AN=54;BaseQRankSum=5.935;DP=442;FS=2.455;HRun=0;HaplotypeScore=108.9031;InbreedingCoeff=0.7609;MQ=72.70;MQ0=13;MQRankSum=-8.731;QD=19.97;ReadPosRankSum=0.865;VQSLOD=3.2454;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,8:10:2.99:53,3,0	1/1:0,2:2:6.02:108,6,0	0/0:38,0:19:40.18:0,40,833	0/0:52,0:25:57:0,57,1302	0/0:2,6:8:0.47:0,0,1	0/0:16,0:16:27.02:0,27,640	0/1:15,0:15:5.32:5,0,836	1/1:5,19:23:54.19:1028,54,0	0/0:8,0:8:21.07:0,21,517	0/0:20,0:20:56.39:0,56,1428	0/0:16,0:16:30.05:0,30,688	0/0:9,0:9:18.06:0,18,388	0/0:22,0:22:53.97:0,54,1206	0/0:15,0:15:36.11:0,36,783	1/1:2,6:12:5.97:63,6,0	0/0:20,0:20:57.20:0,57,1387	0/0:29,0:29:75.26:0,75,1674	0/0:6,0:5:15.05:0,15,355	0/0:20,0:20:60.21:0,60,1442	0/0:25,0:25:72.21:0,72,1560	0/0:9,0:8:21.07:0,21,506	0/0:14,0:14:30.06:0,30,709	0/0:14,0:14:39.13:0,39,979	0/0:9,0:9:18.06:0,18,366	./.	1/1:3,3:6:7.79:169,8,0	1/1:6,5:12:23.88:355,24,0	0/0:1,0:1:2.88:0,3,15
chr10	19597056	.	A	ACTCT	1620.52	PASS	AB=0.845;AC=41;AF=0.788;AN=52;BaseQRankSum=0.251;DP=512;FS=3.367;HRun=0;HaplotypeScore=137.3375;InbreedingCoeff=-0.2769;MQ=67.34;MQ0=15;MQRankSum=1.018;QD=3.49;ReadPosRankSum=-1.283;VQSLOD=2.0576;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	1/1:4,0:4:2.96:19,3,0	./.	0/1:52,0:25:0:0,0,0	1/1:15,0:15:2.99:24,3,0	1/1:12,0:21:2.97:20,3,0	0/1:14,0:19:42.47:42,0,50	1/1:21,0:20:0.89:2,1,0	1/1:9,1:13:6.02:105,6,0	0/1:14,0:23:18.17:115,0,18	1/1:12,0:18:2.74:12,3,0	1/1:3,0:8:8.23:37,8,0	1/1:14,0:24:11.45:49,11,0	1/1:8,0:16:5.49:25,5,0	0/1:17,0:17:29.01:38,0,29	0/1:15,0:23:28.67:29,0,34	0/1:19,13:34:12.77:567,0,13	1/1:10,0:9:5.99:48,6,0	0/1:19,0:24:47.87:48,0,56	0/1:17,0:25:49.88:61,0,50	0/1:11,0:10:35.10:36,0,35	0/1:10,0:15:9.97:10,0,88	0/1:16,0:18:42.10:42,0,81	1/1:11,0:11:11.78:96,12,0	1/1:14,0:12:3:26,3,0	1/1:11,0:10:15.74:188,16,0	1/1:14,0:14:7.38:95,7,0	1/1:3,0:2:0.50:20,0,0
chr10	19597272	.	A	ATGT	1776.78	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=9.911;DP=749;FS=14.585;HRun=0;HaplotypeScore=144.2683;InbreedingCoeff=0.5624;MQ=57.78;MQ0=3;MQRankSum=-8.734;QD=13.88;ReadPosRankSum=-3.534;VQSLOD=1.8701;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:69.68:0,70,911	0/0:3,0:3:9.03:0,9,113	0/0:37,0:27:62.77:0,63,822	0/0:43,0:36:64.57:0,65,1045	0/0:24,0:23:31.86:0,32,531	0/0:30,0:30:78.26:0,78,1173	0/0:33,0:33:84.26:0,84,1230	1/1:32,5:35:44.01:672,44,0	0/0:17,0:17:48.16:0,48,725	0/0:17,0:16:45.15:0,45,666	0/0:13,0:13:36.10:0,36,527	0/0:35,0:35:84.28:0,84,1266	0/0:38,0:38:99:0,99,1447	0/0:24,0:24:63.20:0,63,925	1/1:34,1:35:88.17:1183,88,0	0/0:27,0:27:78.25:0,78,1164	0/0:20,0:20:51.17:0,51,750	0/0:27,0:27:46.25:0,46,905	0/0:22,0:22:45.03:0,45,636	0/0:21,0:21:60.20:0,60,904	0/0:38,0:38:99:0,102,1496	0/0:20,0:20:54.14:0,54,726	0/0:13,0:13:36.12:0,36,533	0/0:53,0:53:99:0,144,2139	0/0:20,0:20:43.93:0,44,605	0/1:23,0:22:6.11:6,0,471	0/1:27,0:27:48.19:48,0,90	0/1:6,0:6:1.86:2,0,62
chr10	19597280	.	G	GT	2746.21	PASS	AB=0.771;AC=10;AF=0.179;AN=56;BaseQRankSum=15.032;DP=752;FS=30.895;HRun=2;HaplotypeScore=114.6161;InbreedingCoeff=0.2622;MQ=55.36;MQ0=1;MQRankSum=-9.394;QD=12.54;ReadPosRankSum=-1.679;VQSLOD=0.6277;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:32,15:47:99:545,0,883	0/0:3,0:3:9.03:0,9,116	0/0:31,0:22:66.05:0,66,798	0/0:46,0:38:99:0,105,1325	0/1:16,5:20:99:115,0,488	0/0:29,0:29:84.24:0,84,1060	0/0:34,0:34:56.53:0,57,1200	1/1:23,13:34:72.33:739,72,0	0/0:19,0:19:54.13:0,54,667	0/0:18,0:18:54.17:0,54,688	0/0:17,0:17:48.15:0,48,618	0/0:34,0:34:93.30:0,93,1204	0/0:37,0:37:99:0,102,1323	0/0:27,0:27:81.25:0,81,1033	1/1:22,10:32:63.64:701,64,0	0/0:28,0:28:84.27:0,84,1089	0/0:20,0:20:57.17:0,57,720	0/0:27,0:27:55.30:0,55,909	0/0:18,0:19:25.56:0,26,619	0/0:21,0:21:63.20:0,63,813	0/0:37,0:37:99:0,111,1440	0/0:19,0:20:60.06:0,60,724	0/0:12,0:13:38.99:0,39,466	0/0:52,0:52:99:0,153,1959	0/1:17,6:22:99:148,0,543	0/1:14,11:25:99:361,0,431	0/1:27,0:27:94.08:133,0,94	0/1:2,6:8:59.49:162,0,59
chr10	19597295	.	T	TTGTTGTTGTTGTTGTTGCTGC	14842.40	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=12.960;DP=736;FS=2.803;HRun=0;HaplotypeScore=382.1809;InbreedingCoeff=0.9063;MQ=61.72;MQ0=1;MQRankSum=-10.655;QD=67.47;ReadPosRankSum=-2.388;VQSLOD=2.6331;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:44,0:44:99:3604,123,0	1/1:4,0:4:12.04:333,12,0	0/0:30,0:22:54.04:0,54,1081	0/0:37,0:32:80.44:0,80,1697	1/1:17,0:16:36.11:1144,36,0	0/0:34,0:34:90.29:0,90,3436	0/0:28,0:28:83.88:0,84,2674	1/1:40,0:38:90.89:2056,91,0	0/0:17,0:17:51.18:0,51,2183	0/0:16,0:16:48.15:0,48,1859	0/0:17,0:17:48.13:0,48,1694	0/0:29,0:29:84.24:0,84,3339	0/0:30,0:30:84.27:0,84,3708	0/0:28,0:28:84.29:0,84,3172	1/1:24,0:32:89.99:2383,90,0	0/0:33,0:33:93.27:0,93,3314	0/0:19,0:19:57.15:0,57,2196	0/0:28,0:28:74.99:0,75,2868	0/0:29,0:29:80.83:0,81,1841	0/0:24,0:24:63.09:0,63,2014	0/0:40,0:40:99:0,114,4412	0/0:15,0:15:36.11:0,36,1410	0/0:13,0:13:36.08:0,36,1150	0/0:49,0:49:99:0,136,5320	1/1:17,0:16:43.01:1564,43,0	0/1:24,0:24:99:1712,0,194	1/1:3,13:34:15.05:1171,15,0	1/1:8,0:8:18.06:875,18,0
chr10	19597487	.	T	TGGA	10294.09	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-15.860;DP=674;FS=7.875;HRun=0;HaplotypeScore=92.9234;InbreedingCoeff=0.9975;MQ=82.47;MQ0=1;MQRankSum=-5.376;QD=50.46;ReadPosRankSum=1.750;VQSLOD=6.8080;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,39:41:93.32:2071,93,0	1/1:1,6:8:15.05:335,15,0	0/0:19,0:19:48.16:0,48,718	0/0:22,0:22:50.12:0,50,720	1/1:6,23:29:63.22:1405,63,0	0/0:35,0:35:99:0,102,1621	0/0:27,0:27:78.24:0,78,1222	1/1:6,18:26:60.14:1113,60,0	0/0:28,0:28:81.26:0,81,1294	0/0:18,0:18:48.16:0,48,763	0/0:19,0:19:51.12:0,51,771	0/0:27,0:27:78.24:0,78,1222	0/0:25,0:25:65.01:0,65,1007	0/0:28,0:28:81.28:0,81,1322	1/1:3,14:17:36.12:802,36,0	0/0:36,0:36:99:0,105,1682	0/0:30,0:30:87.28:0,87,1394	0/0:26,0:25:78.23:0,78,1219	0/0:16,0:16:42.12:0,42,639	0/0:21,0:21:60.10:0,60,897	0/0:32,0:32:84.29:0,84,1369	0/0:15,0:15:38.92:0,39,600	0/0:15,0:15:45.14:0,45,709	0/0:31,0:31:90.26:0,90,1396	1/1:1,18:19:45.15:1003,45,0	1/1:3,20:25:60.20:1297,60,0	1/1:1,23:24:63.22:1404,63,0	1/1:0,14:14:39.13:864,39,0
chr10	19598065	.	AC	A	6487.54	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=14.438;DP=701;FS=0.667;HRun=2;HaplotypeScore=75.2479;InbreedingCoeff=0.9995;MQ=86.08;MQ0=0;MQRankSum=-3.633;QD=34.69;ReadPosRankSum=3.291;VQSLOD=5.2350;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,50:50:99:1634,126,0	1/1:0,20:20:54.18:700,54,0	0/0:28,0:28:84.21:0,84,1105	0/0:20,0:20:51.03:0,51,645	1/1:0,31:31:84.12:1046,84,0	0/0:22,0:22:66.21:0,66,967	0/0:27,0:27:81.24:0,81,1171	0/0:34,0:34:96.31:0,96,1402	0/0:18,0:18:54.17:0,54,789	0/0:33,0:33:96.10:0,96,1373	0/0:16,0:16:42.10:0,42,569	0/0:25,0:25:72.23:0,72,1058	0/0:22,0:22:66.22:0,66,989	0/0:33,0:33:99:0,99,1482	0/0:24,0:24:72.23:0,72,1057	0/0:29,0:29:87.28:0,87,1268	0/0:25,0:25:75.25:0,75,1122	0/0:18,0:18:54.18:0,54,809	0/0:20,0:20:57.17:0,57,798	0/0:25,0:25:72.23:0,72,1057	0/0:27,0:27:78.24:0,78,1145	0/0:20,0:20:60.20:0,60,896	0/0:19,0:19:54.18:0,54,809	0/0:29,0:29:84.27:0,84,1240	1/1:0,27:27:75.24:973,75,0	1/1:1,22:23:24.26:811,24,0	1/1:1,25:26:72.23:934,72,0	1/1:0,10:10:30.10:389,30,0
chr10	19598367	.	G	GCACTC	18331.64	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=18.775;DP=834;FS=5.454;HRun=0;HaplotypeScore=198.0821;InbreedingCoeff=0.9889;MQ=70.71;MQ0=0;MQRankSum=-20.686;QD=72.17;ReadPosRankSum=-3.360;VQSLOD=4.8562;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:13,30:43:90.18:2683,90,0	1/1:5,13:18:44.92:1307,45,0	0/0:21,0:21:54.17:0,54,1107	0/0:20,0:20:51.12:0,51,960	1/1:6,27:32:48.16:1431,48,0	0/0:19,0:19:57.20:0,57,1238	0/0:24,0:24:63.20:0,63,1328	1/1:20,15:35:99:2946,102,0	0/0:30,0:30:84.29:0,84,1824	0/0:30,0:30:90.31:0,90,1955	0/0:27,0:27:72.23:0,72,1482	0/0:44,0:44:99:0,126,2736	0/0:33,0:33:99:0,99,2028	0/0:46,0:46:99:0,132,2865	1/1:8,28:36:99:3137,106,0	0/0:34,0:34:96.32:0,96,2045	0/0:33,0:33:96.30:0,96,2003	0/0:24,0:24:66.23:0,66,1410	0/0:19,0:19:57.20:0,57,1233	0/0:29,0:29:87.30:0,87,1838	0/0:54,0:54:99:0,147,3114	0/0:36,0:36:99:0,105,2233	0/0:24,0:24:72.25:0,72,1544	0/0:33,0:33:96.29:0,96,2040	1/1:9,19:28:69.22:1953,69,0	1/1:8,20:27:16.03:2165,16,0	1/1:6,23:30:81.28:2430,81,0	1/1:0,3:3:9.03:280,9,0
chr10	19598369	.	A	ACTCC	11261.41	PASS	AB=1.000;AC=16;AF=0.286;AN=56;BaseQRankSum=18.366;DP=811;FS=5.734;HRun=0;HaplotypeScore=195.2154;InbreedingCoeff=0.8140;MQ=72.69;MQ0=0;MQRankSum=-18.871;QD=48.54;ReadPosRankSum=-0.627;VQSLOD=4.5176;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:36,0:36:23.92:1651,24,0	1/1:14,1:15:41.73:904,42,0	0/0:22,0:22:63.12:0,63,1144	0/0:19,0:19:51.03:0,51,907	0/1:30,0:29:35.36:937,0,35	0/0:19,0:19:57.20:0,57,1194	0/0:22,0:22:66.20:0,66,1310	1/1:26,0:26:24.11:1298,24,0	0/0:30,0:30:87.28:0,87,1787	0/0:31,0:31:90.31:0,90,1888	0/0:27,0:27:75.24:0,75,1518	0/0:44,0:44:99:0,129,2670	0/0:34,0:34:99:0,102,2035	0/0:46,0:46:99:0,138,2817	1/1:34,1:35:79.76:2016,80,0	0/0:33,0:33:96.33:0,96,2001	0/0:33,0:33:96.30:0,96,1937	0/0:24,0:24:66.23:0,66,1383	0/0:20,0:20:60.10:0,60,1203	0/0:29,0:29:87.30:0,87,1818	0/0:53,0:53:99:0,154,3118	0/0:35,0:35:99:0,105,2180	0/0:24,0:24:72.25:0,72,1497	0/0:34,0:34:99:0,102,2044	1/1:27,0:27:45.75:1203,46,0	0/1:32,0:31:27.14:1477,0,27	1/1:26,2:28:75.26:1585,75,0	1/1:3,0:3:9.03:190,9,0
chr10	19598374	.	G	GT	8803.67	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=18.419;DP=828;FS=5.940;HRun=0;HaplotypeScore=154.0541;InbreedingCoeff=0.9905;MQ=74.82;MQ0=0;MQRankSum=-18.265;QD=36.68;ReadPosRankSum=-3.711;VQSLOD=2.9728;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:0,38:38:84.67:1186,85,0	1/1:2,13:15:42.11:611,42,0	0/0:21,0:21:45.20:0,45,712	0/0:21,1:22:23.85:0,24,672	1/1:1,29:29:49.17:691,49,0	0/0:19,0:19:57.19:0,57,796	0/0:24,0:24:69.19:0,69,910	1/1:0,30:30:87.22:1271,87,0	0/0:30,0:30:90.26:0,90,1219	0/0:30,0:30:90.29:0,90,1243	0/0:28,0:28:81.26:0,81,1096	0/0:45,0:45:99:0,135,1845	0/0:31,0:31:93.29:0,93,1276	0/0:48,0:48:99:0,141,1952	1/1:3,31:34:99:1481,99,0	0/0:34,0:34:99:0,102,1387	0/0:30,0:30:90.30:0,90,1256	0/0:26,0:26:75.19:0,75,993	0/0:23,0:23:69.19:0,69,908	0/0:29,0:29:84.28:0,84,1166	0/0:52,0:52:99:0,150,2059	0/0:37,0:37:99:0,108,1476	0/0:23,0:23:69.23:0,69,963	0/0:36,0:36:99:0,108,1470	1/1:1,26:27:66.14:931,66,0	1/1:2,32:33:60.39:1457,60,0	1/1:5,23:29:72.22:1039,72,0	1/1:0,3:3:9.03:138,9,0
chr10	19598501	.	AG	A	20239.84	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-3.952;DP=831;FS=0.537;HRun=6;HaplotypeScore=98.1756;InbreedingCoeff=0.9982;MQ=81.65;MQ0=0;MQRankSum=-10.402;QD=26.35;ReadPosRankSum=8.204;VQSLOD=3.5349;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,51:53:99:1450,135,0	1/1:2,16:18:33.02:340,33,0	0/0:28,0:28:63.86:0,64,834	0/0:34,0:35:80.82:0,81,926	1/1:2,23:25:54.11:577,54,0	1/1:0,22:22:63.16:677,63,0	1/1:1,28:29:75.19:806,75,0	1/1:1,21:22:57.13:602,57,0	1/1:3,37:40:99:1064,99,0	1/1:3,37:40:99:1159,108,0	1/1:1,23:24:63.16:677,63,0	1/1:2,41:43:99:1096,102,0	1/1:4,35:39:87.11:934,87,0	1/1:0,27:27:66.17:709,66,0	1/1:5,41:46:99:1160,108,0	1/1:1,36:37:84.21:903,84,0	1/1:2,32:34:87.22:935,87,0	1/1:1,19:20:54.14:580,54,0	1/1:4,19:23:57.14:612,57,0	1/1:1,23:24:69.17:742,69,0	1/1:6,33:39:84.21:903,84,0	1/1:3,18:21:36.09:387,36,0	1/1:0,10:10:27.07:290,27,0	1/1:2,19:21:54.14:580,54,0	1/1:0,34:34:81.20:871,81,0	1/1:2,32:34:96.23:1023,96,0	1/1:0,35:35:84.20:903,84,0	1/1:0,8:8:24.06:258,24,0
chr10	19599387	.	GATTATT	G	2030.92	PASS	AB=0.741;AC=41;AF=0.891;AN=46;BaseQRankSum=-1.215;DP=283;FS=1.876;HRun=0;HaplotypeScore=61.4120;InbreedingCoeff=-0.0119;MQ=79.20;MQ0=1;MQRankSum=-3.172;QD=8.29;ReadPosRankSum=1.856;VQSLOD=1.7083;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:9,0:16:9.03:126,9,0	1/1:3,0:4:3.01:42,3,0	./.	./.	./.	0/1:3,6:10:6.36:167,0,6	1/1:3,1:4:3.01:61,3,0	1/1:37,0:37:5.99:71,6,0	1/1:5,0:8:6.02:84,6,0	1/1:9,2:11:6.02:121,6,0	1/1:15,1:17:6.02:110,6,0	1/1:8,0:9:3.01:42,3,0	1/1:5,2:7:6.02:121,6,0	0/1:3,0:4:12.37:54,0,12	0/0:8,0:8:6.02:0,6,193	1/1:6,2:8:9.03:172,9,0	1/1:6,6:12:9.03:182,9,0	1/1:9,7:16:12.04:240,12,0	0/1:12,3:15:9.57:74,0,10	1/1:5,3:8:6.02:121,6,0	./.	./.	1/1:7,1:8:3.01:61,3,0	1/1:6,0:6:3.01:60,3,0	1/1:7,0:8:5.50:48,6,0	1/1:9,0:9:3.01:57,3,0	1/1:6,0:8:3.01:42,3,0	1/1:14,0:19:6.02:84,6,0
chr10	19599517	.	GT	G	2556.52	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=13.096;DP=441;FS=12.088;HRun=8;HaplotypeScore=62.2298;InbreedingCoeff=0.9828;MQ=79.50;MQ0=0;MQRankSum=-8.780;QD=20.62;ReadPosRankSum=-0.389;VQSLOD=2.8240;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,8:11:24.01:225,24,0	1/1:0,11:11:33.05:318,33,0	0/0:13,0:13:12.02:0,12,127	0/0:14,0:14:20.12:0,20,205	1/1:3,11:14:27.04:260,27,0	0/0:19,0:19:51.16:0,51,615	0/0:17,0:17:42.13:0,42,507	1/1:6,22:28:72.09:687,72,0	0/0:14,0:14:39.12:0,39,471	0/0:15,0:15:45.14:0,45,541	0/0:13,0:13:36.11:0,36,430	0/0:10,0:11:29.96:0,30,341	0/0:19,0:19:54.16:0,54,645	0/0:7,0:7:21.06:0,21,254	0/0:11,0:11:33.10:0,33,399	0/0:18,0:18:48.14:0,48,569	0/0:22,0:22:57.17:0,57,688	0/0:25,0:25:69.18:0,69,812	0/0:13,1:14:10.12:0,10,394	0/0:19,0:19:51.13:0,51,594	0/0:20,0:20:57.17:0,57,687	0/0:8,0:8:18.06:0,18,217	0/0:19,0:19:54.17:0,54,650	0/0:19,0:19:51.16:0,51,616	1/1:2,16:18:39.06:376,39,0	1/1:1,10:11:30.05:289,30,0	1/1:2,14:16:42.06:405,42,0	1/1:5,10:14:21.03:203,21,0
chr10	19599539	.	GA	G	3641.76	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=12.564;DP=427;FS=0.935;HRun=5;HaplotypeScore=60.4323;InbreedingCoeff=0.9977;MQ=89.22;MQ0=0;MQRankSum=-9.652;QD=30.86;ReadPosRankSum=-0.857;VQSLOD=3.8497;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,15:18:39.11:442,39,0	1/1:0,10:10:30.09:340,30,0	0/0:14,0:14:38.34:0,38,448	0/0:23,0:23:48.06:0,48,587	1/1:0,18:18:48.14:544,48,0	0/0:24,0:24:72.24:0,72,984	0/0:15,0:15:42.13:0,42,559	1/1:3,24:27:75.20:842,75,0	0/0:17,0:17:45.14:0,45,598	0/0:14,0:14:39.13:0,39,533	0/0:9,0:9:27.09:0,27,369	0/0:12,0:12:36.11:0,36,477	0/0:15,0:15:42.14:0,42,574	0/0:10,0:10:27.09:0,27,369	0/0:12,0:12:27.09:0,27,369	0/0:14,0:14:42.14:0,42,575	0/0:21,0:21:63.21:0,63,861	0/0:21,0:21:57.15:0,57,741	0/0:13,0:13:30.09:0,30,394	0/0:14,0:14:39.13:0,39,534	0/0:23,0:23:69.21:0,69,926	0/0:7,0:7:21.07:0,21,287	0/0:14,0:14:36.12:0,36,492	0/0:17,0:17:48.16:0,48,655	1/1:2,8:10:30.08:336,30,0	1/1:0,11:11:33.09:374,33,0	1/1:2,15:17:48.09:527,48,0	1/1:0,7:7:21.06:238,21,0
chr10	19600841	.	GTTTTTTGTT	G	5929	PASS	AB=0.556;AC=17;AF=0.304;AN=56;BaseQRankSum=10.890;DP=585;FS=0.000;HRun=0;HaplotypeScore=168.6241;InbreedingCoeff=0.8607;MQ=68.23;MQ0=4;MQRankSum=-7.040;QD=39.79;ReadPosRankSum=2.417;VQSLOD=4.6378;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,23:23:51.17:1356,51,0	1/1:0,3:4:6.02:147,6,0	0/0:36,0:18:18.28:0,18,342	0/0:34,0:17:14.69:0,15,250	1/1:2,21:24:29.97:645,30,0	0/0:19,0:19:51.12:0,51,1223	0/0:22,0:22:57.15:0,57,1440	1/1:4,0:24:55.26:815,55,0	0/0:11,0:11:27.53:0,28,773	0/0:29,0:29:66.10:0,66,1625	0/0:23,0:23:65.93:0,66,1843	0/0:23,0:23:36.06:0,36,803	0/0:16,0:14:33.08:0,33,1039	0/0:17,0:17:48.10:0,48,1263	1/1:2,11:13:15.05:429,15,0	0/0:14,0:14:33.05:0,33,884	0/0:52,0:52:96.11:0,96,2861	0/0:23,0:22:60.16:0,60,1960	0/0:17,0:17:42.12:0,42,962	0/0:23,0:23:60.15:0,60,1447	0/0:14,0:14:33.02:0,33,715	0/0:19,0:19:39.02:0,39,1204	0/0:20,0:20:57.17:0,57,1634	0/0:24,0:24:60.05:0,60,1606	1/1:2,11:13:24.01:601,24,0	0/1:4,16:20:77.94:618,0,78	1/1:1,14:18:45.15:1232,45,0	1/1:0,4:4:3.01:86,3,0
chr10	19600847	.	TG	T	2173.50	PASS	AB=0.978;AC=28;AF=0.500;AN=56;BaseQRankSum=6.980;DP=594;FS=93.284;HRun=1;HaplotypeScore=103.4626;InbreedingCoeff=0.0326;MQ=60.70;MQ0=13;MQRankSum=-8.675;QD=5.78;ReadPosRankSum=-1.097;VQSLOD=-0.7163;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:22:34.85:364,35,0	1/1:4,0:4:5.99:48,6,0	0/0:37,0:13:5.19:0,5,102	0/0:31,0:11:2.45:0,2,78	1/1:23,0:23:29.86:229,30,0	0/1:18,1:19:25.60:26,0,188	0/0:21,0:21:23.33:0,23,257	1/1:27,0:26:47.23:492,47,0	0/0:11,0:11:3.63:0,4,162	0/0:26,0:25:51.50:0,51,408	0/1:28,0:27:43.88:44,0,172	0/1:20,1:21:12.24:12,0,87	0/1:19,0:16:19.99:20,0,113	0/1:21,0:21:16.11:16,0,138	1/1:13,0:12:14.96:119,15,0	0/0:13,0:13:22.14:0,22,133	0/0:56,1:57:30.32:0,30,368	0/1:24,0:23:4.16:4,0,262	0/1:21,0:21:79.07:79,0,114	0/1:25,0:25:19.98:20,0,230	0/1:11,1:12:21.93:22,0,96	0/1:17,1:18:41.93:42,0,51	0/0:21,1:21:2.68:0,3,156	0/1:21,1:21:26.94:27,0,147	1/1:13,0:12:8.92:153,9,0	0/1:19,0:18:20.26:259,0,20	1/1:18,0:17:44.80:352,45,0	1/1:4,0:4:3:25,3,0
chr10	19600848	.	GT	G	2300.31	PASS	AB=0.796;AC=42;AF=0.750;AN=56;BaseQRankSum=0.225;DP=601;FS=4.407;HRun=16;HaplotypeScore=106.5563;InbreedingCoeff=0.1060;MQ=60.33;MQ0=15;MQRankSum=-0.091;QD=4.40;ReadPosRankSum=3.598;VQSLOD=1.9479;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:22:18.25:75,18,0	1/1:4,0:4:4.26:14,4,0	0/0:37,0:13:8.66:0,9,39	0/0:30,0:11:3.92:0,4,24	1/1:24,0:23:11.56:37,12,0	1/1:19,2:20:19.45:130,19,0	0/1:13,7:21:23.98:76,0,24	0/1:27,0:26:8.69:49,0,9	0/0:11,0:11:16.60:0,17,113	0/1:16,9:26:21.13:89,0,21	0/1:13,14:28:5.86:180,0,6	1/1:6,14:21:15.09:91,15,0	0/1:16,3:16:30.84:81,0,31	1/1:14,4:20:5.33:131,5,0	1/1:13,0:12:10.19:31,10,0	1/1:6,7:13:0.93:103,1,0	0/1:21,32:58:99:215,0,118	0/1:20,5:24:86.56:87,0,113	1/1:9,12:21:10.29:152,10,0	1/1:20,6:26:20.40:167,20,0	1/1:8,4:12:12.06:72,12,0	1/1:9,7:17:14.26:187,14,0	1/1:16,6:21:7.57:155,8,0	1/1:14,9:22:23.23:206,23,0	1/1:13,0:12:0.40:25,0,0	0/1:19,0:18:2.26:17,0,2	1/1:18,0:17:23.53:82,24,0	1/1:4,0:4:2.04:6,2,0
chr10	19601372	.	A	AT	6040.02	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-6.945;DP=700;FS=2.829;HRun=6;HaplotypeScore=110.3293;InbreedingCoeff=0.9983;MQ=88.31;MQ0=0;MQRankSum=-3.490;QD=32.65;ReadPosRankSum=3.973;VQSLOD=3.9107;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,43:46:99:1579,126,0	1/1:1,9:10:27.09:340,27,0	0/0:22,0:22:57.04:0,57,549	0/0:28,0:29:60.43:0,60,599	1/1:2,22:24:66.21:830,66,0	0/0:20,0:19:54.10:0,54,544	0/0:27,0:27:78.16:0,78,788	0/0:33,0:33:93.17:0,93,936	0/0:28,0:28:81.18:0,81,825	0/0:24,0:24:51.11:0,51,520	0/0:19,0:19:54.12:0,54,551	0/0:24,0:24:69.16:0,69,704	0/0:32,0:32:90.20:0,90,918	0/0:15,0:15:45.10:0,45,459	0/0:29,0:29:87.20:0,87,887	0/0:15,0:15:39.07:0,39,391	0/0:19,0:19:57.13:0,57,581	0/0:24,0:24:63.14:0,63,643	0/0:17,0:17:51.11:0,51,514	0/0:23,0:23:60.10:0,60,598	0/0:32,0:32:84.18:0,84,857	0/0:23,0:23:66.15:0,66,673	0/0:21,0:21:54.06:0,54,551	0/0:39,0:39:99:0,114,1146	1/1:2,28:30:72.23:906,72,0	1/1:2,28:30:56.66:1026,57,0	1/1:2,34:36:90.07:1132,90,0	1/1:3,6:9:18.06:226,18,0
chr10	19601547	.	AT	A	4170.77	PASS	AB=0.670;AC=33;AF=0.589;AN=56;BaseQRankSum=9.106;DP=501;FS=0.404;HRun=13;HaplotypeScore=58.0320;InbreedingCoeff=0.3769;MQ=69.42;MQ0=0;MQRankSum=-0.271;QD=11.33;ReadPosRankSum=2.382;VQSLOD=3.3838;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:17,4:21:45.57:46,0,250	0/0:8,0:8:15.02:0,15,146	0/0:8,0:7:2.90:0,3,27	0/0:8,0:8:5.94:0,6,44	0/1:19,4:23:27.63:28,0,394	1/1:5,11:15:0.62:168,1,0	1/1:2,12:15:40.03:273,40,0	0/1:12,18:30:24.18:310,0,24	0/0:8,0:18:34.76:0,35,222	1/1:4,18:23:55.67:398,56,0	1/1:2,12:15:34.83:247,35,0	1/1:4,13:17:26.41:196,26,0	0/1:4,12:17:17.49:206,0,17	1/1:2,9:12:25.90:181,26,0	1/1:3,0:18:28.34:83,28,0	1/1:2,8:12:29.97:193,30,0	0/1:8,23:31:19.25:368,0,19	0/1:6,9:15:34.51:107,0,35	1/1:8,9:17:0.64:168,1,0	0/1:7,13:20:16.62:221,0,17	1/1:1,15:17:40.81:290,41,0	1/1:2,16:19:20.57:305,21,0	1/1:5,13:20:26.42:254,26,0	1/1:2,8:10:17.86:129,18,0	0/0:21,1:22:32.17:0,32,469	0/0:22,1:23:26.14:0,26,405	0/0:26,0:26:69:0,69,638	0/0:20,0:20:36.04:0,36,345
chr10	19608110	.	C	CT	17960.59	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-7.830;DP=717;FS=0.965;HRun=2;HaplotypeScore=88.4875;InbreedingCoeff=0.9999;MQ=85.92;MQ0=0;MQRankSum=-4.294;QD=37.11;ReadPosRankSum=5.265;VQSLOD=5.1008;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:69.20:0,69,841	0/0:12,0:12:36.11:0,36,436	0/0:28,0:26:64.24:0,64,659	0/0:20,0:20:53.44:0,53,531	0/0:25,0:25:75.22:0,75,917	1/1:2,20:22:51.17:734,51,0	1/1:1,28:29:72.24:1037,72,0	0/0:27,0:27:72.22:0,72,881	1/1:0,36:36:93.26:1339,93,0	1/1:1,29:30:87.29:1252,87,0	1/1:1,17:18:51.16:716,51,0	1/1:1,26:27:69.23:993,69,0	1/1:1,32:33:90.30:1296,90,0	1/1:2,31:33:81.03:1165,81,0	1/1:0,38:38:99:1426,99,0	1/1:2,27:29:75.25:1080,75,0	1/1:0,28:28:72.24:1035,72,0	1/1:0,17:17:45.15:648,45,0	1/1:2,32:34:96.31:1361,96,0	1/1:1,13:14:39.03:509,39,0	1/1:1,26:27:72.24:1037,72,0	1/1:2,18:20:48.08:664,48,0	1/1:1,22:23:51.02:718,51,0	1/1:0,26:26:66.22:950,66,0	0/0:26,0:26:75.21:0,75,905	0/0:29,0:29:84.26:0,84,1030	0/0:31,0:31:93.28:0,93,1139	0/0:10,0:10:30.09:0,30,371
chr10	19609053	.	TA	T	8757.59	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=4.428;DP=579;FS=1.184;HRun=11;HaplotypeScore=73.9462;InbreedingCoeff=0.8830;MQ=64.08;MQ0=5;MQRankSum=-2.129;QD=17.59;ReadPosRankSum=5.356;VQSLOD=5.5698;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,21:22:12.97:313,13,0	1/1:2,5:7:8.99:74,9,0	0/0:23,0:9:14.04:0,14,158	0/0:12,1:6:2.02:0,2,78	1/1:6,24:31:10.82:489,11,0	1/1:1,19:20:53.94:443,54,0	1/1:2,12:14:26.97:222,27,0	0/0:30,1:33:50.03:0,50,693	0/0:12,0:12:32.92:0,33,334	1/1:4,22:26:65.82:528,66,0	1/1:4,34:38:82.82:663,83,0	1/1:3,16:20:34.99:277,35,0	1/1:1,18:19:47.94:394,48,0	1/1:2,10:12:26.97:222,27,0	1/1:1,22:23:50.94:419,51,0	1/1:3,15:18:35.96:296,36,0	1/1:6,21:27:50.89:413,51,0	1/1:3,25:28:69.34:559,69,0	1/1:1,17:19:23.94:383,24,0	1/1:4,18:22:21.82:373,22,0	1/1:2,10:12:29.96:246,30,0	1/1:2,12:14:29.90:239,30,0	1/1:0,22:22:43.98:368,44,0	1/1:2,8:10:20.96:172,21,0	1/1:1,26:27:62.82:517,63,0	1/1:2,23:25:65.85:534,66,0	1/1:4,29:33:65.91:542,66,0	1/1:0,8:8:8.99:74,9,0
chr10	19610704	.	GA	G	482.15	PASS	AB=0.895;AC=3;AF=0.054;AN=56;BaseQRankSum=5.760;DP=573;FS=0.782;HRun=9;HaplotypeScore=54.8576;InbreedingCoeff=0.6672;MQ=81.23;MQ0=0;MQRankSum=0.891;QD=10.48;ReadPosRankSum=-2.817;VQSLOD=1.7099;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,105,1211	0/0:11,0:11:21.53:0,22,244	0/0:14,0:14:30.07:0,30,318	0/1:15,2:17:3.70:4,0,167	0/0:17,1:19:21.74:0,22,465	0/0:18,1:19:23.68:0,24,527	0/0:16,0:16:45.10:0,45,498	1/1:7,22:29:63.02:576,63,0	0/0:22,0:22:60.17:0,60,684	0/0:28,0:28:71.94:0,72,801	0/0:14,0:14:36.11:0,36,415	0/0:20,0:20:60.18:0,60,692	0/0:20,0:20:51.15:0,51,589	0/0:22,0:22:63.18:0,63,717	0/0:23,0:23:63.18:0,63,718	0/0:22,0:22:54.12:0,54,601	0/0:15,0:15:42.12:0,42,485	0/0:14,0:14:30.09:0,30,346	0/0:21,0:21:57.15:0,57,641	0/0:33,0:33:87.24:0,87,986	0/0:20,0:21:56.96:0,57,613	0/0:18,0:18:42.11:0,42,468	0/0:17,0:17:42.12:0,42,485	0/0:21,0:21:60.18:0,60,691	0/0:20,0:20:60.17:0,60,684	0/0:28,0:28:81.24:0,81,935	0/0:25,0:25:72.21:0,72,831	0/0:2,0:2:6.02:0,6,69
chr10	19611653	.	AAAT	A	25645.69	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-0.532;DP=668;FS=4.578;HRun=0;HaplotypeScore=112.1658;InbreedingCoeff=0.9987;MQ=83.74;MQ0=0;MQRankSum=-7.851;QD=44.45;ReadPosRankSum=9.096;VQSLOD=5.8500;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:3,31:34:81.28:1355,81,0	1/1:1,10:11:21.07:358,21,0	0/0:24,0:24:60.67:0,61,1250	0/0:22,0:22:63.14:0,63,1242	1/1:2,49:51:99:2117,126,0	1/1:0,19:19:51.17:870,51,0	1/1:1,19:20:42.14:716,42,0	0/0:32,0:32:96.33:0,96,2203	0/0:13,0:13:36.12:0,36,819	1/1:1,28:29:84.27:1404,84,0	1/1:0,21:21:60.21:1022,60,0	1/1:2,16:18:39.13:665,39,0	1/1:0,32:32:90.31:1533,90,0	1/1:1,12:13:33.11:561,33,0	1/1:2,15:17:45.15:754,45,0	1/1:3,26:29:78.27:1328,78,0	1/1:0,28:28:78.27:1330,78,0	1/1:0,18:18:54.18:921,54,0	1/1:1,19:20:57.20:972,57,0	1/1:0,26:26:72.25:1228,72,0	1/1:0,13:13:33.11:562,33,0	1/1:0,29:29:72.20:1197,72,0	1/1:1,28:29:72.01:1227,72,0	1/1:1,22:23:54.18:921,54,0	1/1:0,23:23:60.21:1023,60,0	1/1:1,23:24:69.22:1150,69,0	1/1:1,31:32:93.32:1586,93,0	1/1:0,18:18:51.17:846,51,0
chr10	19612240	.	C	CT	8615.73	PASS	AB=0.586;AC=32;AF=0.571;AN=56;BaseQRankSum=-11.947;DP=752;FS=3.851;HRun=10;HaplotypeScore=90.7761;InbreedingCoeff=0.8230;MQ=79.06;MQ0=9;MQRankSum=-0.381;QD=20.22;ReadPosRankSum=1.106;VQSLOD=5.5726;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:16,1:19:14.01:0,14,294	0/0:16,1:17:12.93:0,13,308	0/0:61,0:38:27.01:0,27,320	0/0:57,0:27:12.71:0,13,191	0/0:31,0:32:82.39:0,82,649	1/1:1,22:23:45.11:480,45,0	1/1:2,12:15:33.03:339,33,0	0/0:9,0:20:26.53:0,27,77	0/0:17,0:17:43.92:0,44,343	1/1:11,25:36:71.91:697,72,0	1/1:7,24:32:31.55:672,32,0	1/1:4,23:27:32.50:551,33,0	1/1:4,26:30:38.52:609,39,0	0/1:6,13:19:18.82:197,0,19	0/1:7,19:26:1.17:400,0,1	1/1:4,11:15:2.42:231,2,0	1/1:8,27:35:57.12:599,57,0	1/1:0,25:25:72.18:767,72,0	1/1:6,16:22:26.37:443,26,0	1/1:3,25:31:58.96:727,59,0	1/1:1,8:9:24.06:256,24,0	1/1:4,32:36:63.21:858,63,0	1/1:5,22:28:53.97:558,54,0	1/1:3,13:16:2.49:231,2,0	0/0:29,0:29:81.71:0,82,655	0/0:26,0:26:26.31:0,26,363	0/0:29,1:32:48.02:0,48,541	0/0:12,0:12:32.93:0,33,266
chr10	19612252	.	C	CT	881.30	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.234;DP=741;FS=1.540;HRun=0;HaplotypeScore=119.8560;InbreedingCoeff=0.9987;MQ=81.32;MQ0=7;MQRankSum=-1.763;QD=31.47;ReadPosRankSum=-3.603;VQSLOD=2.3612;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:57.12:0,57,725	0/0:14,0:14:42.12:0,42,568	0/0:60,0:37:68.94:0,69,901	0/0:55,1:27:41.08:0,41,540	0/0:31,0:31:90.27:0,90,1205	0/0:27,0:27:56.45:0,56,445	0/0:15,0:15:38.61:0,39,304	1/1:3,25:26:75.08:976,75,0	0/0:20,0:20:54.12:0,54,713	0/0:25,0:24:57.90:0,58,465	0/0:35,0:35:81.16:0,81,701	0/0:25,0:25:61.15:0,61,451	0/0:29,0:29:70.89:0,71,551	0/0:18,0:18:32.83:0,33,295	0/0:20,0:20:50.33:0,50,409	0/0:15,0:15:32.82:0,33,263	0/0:28,0:28:56.20:0,56,375	0/0:26,0:26:72.95:0,73,484	0/0:22,0:22:60.71:0,61,549	0/0:30,0:30:84.31:0,84,652	0/0:10,0:10:29.75:0,30,228	0/0:37,0:37:77.97:0,78,710	0/0:28,0:28:57.20:0,57,451	0/0:17,0:17:38.75:0,39,333	0/0:28,0:28:84.27:0,84,1157	0/0:24,0:24:69.22:0,69,942	0/0:37,0:36:99:0,108,1433	0/0:16,0:16:48.10:0,48,628
chr10	19612587	.	CTCT	C	1139.80	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.812;DP=792;FS=0.000;HRun=0;HaplotypeScore=118.6230;InbreedingCoeff=0.9921;MQ=87.97;MQ0=1;MQRankSum=-2.975;QD=29.99;ReadPosRankSum=-3.682;VQSLOD=3.1346;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,126,2640	0/0:16,0:16:48.16:0,48,1028	0/0:34,0:31:62.44:0,62,1417	0/0:50,0:47:90.96:0,91,1477	0/0:32,0:32:87.30:0,87,1851	0/0:27,0:27:78.27:0,78,1685	0/0:21,0:21:57.20:0,57,1226	1/1:10,28:38:81.27:1235,81,0	0/0:27,0:27:78.27:0,78,1674	0/0:35,0:35:93.32:0,93,1899	0/0:23,0:23:63.22:0,63,1373	0/0:28,0:28:72.24:0,72,1533	0/0:28,0:28:81.28:0,81,1746	0/0:27,0:27:78.26:0,78,1645	0/0:37,0:37:99:0,99,1956	0/0:25,0:25:72.25:0,72,1523	0/0:24,0:24:60.21:0,60,1312	0/0:18,0:18:51.18:0,51,1112	0/0:26,0:26:69.22:0,69,1393	0/0:28,0:28:81.28:0,81,1709	0/0:28,0:28:78.27:0,78,1659	0/0:31,0:31:90.30:0,90,1882	0/0:21,0:21:60.21:0,60,1266	0/0:29,0:29:78.27:0,78,1637	0/0:24,0:24:60.20:0,60,1248	0/0:31,0:31:93.30:0,93,1899	0/0:32,0:32:96.30:0,96,1995	0/0:6,0:6:18.06:0,18,373
chr10	19613252	.	A	ATGTG	11271.14	PASS	AB=0.764;AC=46;AF=0.821;AN=56;BaseQRankSum=2.695;DP=693;FS=1.771;HRun=0;HaplotypeScore=180.1218;InbreedingCoeff=0.3485;MQ=52.92;MQ0=12;MQRankSum=-4.343;QD=17.64;ReadPosRankSum=-1.716;VQSLOD=4.5451;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:29:3:52,3,0	1/1:8,0:8:3.01:50,3,0	0/1:37,0:15:2.81:3,0,40	0/0:34,0:12:9.02:0,9,97	0/1:26,0:26:0:0,0,0	1/1:5,12:18:26.12:608,26,0	1/1:19,6:26:18.04:414,18,0	1/1:23,0:21:6.45:78,6,0	0/0:17,0:20:45.12:0,45,667	1/1:19,14:34:38.33:1160,38,0	1/1:14,6:24:18.01:350,18,0	0/1:13,11:28:1.37:617,0,1	1/1:15,9:26:27.09:530,27,0	1/1:12,15:29:7.70:819,8,0	1/1:14,9:23:36.10:730,36,0	0/1:8,14:22:6.83:896,0,7	0/1:10,10:21:1.36:646,0,1	1/1:11,4:16:18.06:383,18,0	1/1:13,9:25:45.09:754,45,0	1/1:7,15:22:27.09:649,27,0	1/1:39,2:45:26.73:407,27,0	0/1:11,10:22:8.32:601,0,8	1/1:11,13:27:26.58:624,27,0	1/1:18,9:28:11.78:247,12,0	1/1:18,0:17:3.01:52,3,0	1/1:24,0:24:24.46:320,24,0	1/1:22,0:22:6.02:114,6,0	1/1:15,0:15:11.58:170,12,0
chr10	19613275	.	T	TGTGTGTGTGTGTGTGCGCGCAC	5805.81	PASS	AB=0.913;AC=21;AF=0.375;AN=56;BaseQRankSum=-6.313;DP=664;FS=0.490;HRun=0;HaplotypeScore=368.5285;InbreedingCoeff=0.0890;MQ=46.63;MQ0=11;MQRankSum=-4.302;QD=15.91;ReadPosRankSum=-5.382;VQSLOD=1.7744;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:5,10:40:3.01:316,3,0	1/1:8,0:8:3.01:74,3,0	0/0:36,0:18:20.03:0,20,794	0/0:27,0:12:36.12:0,36,850	0/1:2,10:27:0:0,0,0	0/0:21,0:21:39.07:0,39,900	0/0:27,0:27:13.99:0,14,863	0/1:11,0:16:99:342,0,390	0/0:24,0:24:66.23:0,66,3088	0/1:32,0:32:99:192,0,1118	0/1:21,0:21:6.72:7,0,354	0/0:23,0:23:8.81:0,9,718	0/1:18,0:18:94.42:94,0,630	0/0:29,0:29:49.02:0,49,1393	0/1:22,0:22:73.34:73,0,887	0/0:20,0:20:19.37:0,19,1212	0/1:16,0:16:61.47:61,0,654	0/1:17,0:17:99:114,0,766	0/1:22,0:20:99:263,0,691	0/0:18,0:18:33.11:0,33,741	0/1:34,0:33:39.24:39,0,414	0/0:21,0:21:41.97:0,42,955	0/0:25,0:25:38.46:0,38,834	0/0:27,0:27:1.58:0,2,574	1/1:5,9:27:3.01:316,3,0	0/1:2,7:22:14.77:1335,0,15	1/1:6,8:28:10.27:616,10,0	1/1:7,0:12:26.72:1964,27,0
chr10	19615225	.	GCC	G	4157.82	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=5.405;DP=448;FS=9.214;HRun=8;HaplotypeScore=84.6826;InbreedingCoeff=0.9965;MQ=73.56;MQ0=0;MQRankSum=-5.067;QD=31.98;ReadPosRankSum=0.715;VQSLOD=3.0559;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,25:26:66.20:805,66,0	1/1:1,9:10:27.08:329,27,0	0/0:17,0:17:30.07:0,30,438	0/0:10,0:10:17.53:0,18,252	1/1:1,16:17:51.15:610,51,0	0/0:17,0:17:45.15:0,45,761	0/0:15,0:15:30.10:0,30,498	1/1:5,19:24:57.17:695,57,0	0/0:10,0:10:24.08:0,24,389	0/0:16,0:16:36.12:0,36,602	0/0:16,0:16:45.15:0,45,759	0/0:16,0:16:39.13:0,39,660	0/0:12,0:12:24.08:0,24,406	0/0:13,0:13:36.12:0,36,595	0/0:7,0:20:54.09:0,54,560	0/0:18,0:18:51.17:0,51,856	0/0:24,0:24:66.21:0,66,1071	0/0:24,0:24:63.22:0,63,1062	0/0:18,0:18:45.13:0,45,732	0/0:18,0:18:51.17:0,51,853	0/0:11,0:11:24.04:0,24,374	0/0:14,0:14:36.11:0,36,564	0/0:16,0:16:42.12:0,42,648	0/0:11,0:11:24.08:0,24,406	1/1:1,10:11:30.09:366,30,0	1/1:3,10:13:36.10:419,36,0	1/1:3,16:19:48.10:568,48,0	1/1:0,10:10:30.09:366,30,0
chr10	19615270	.	AAGG	A	5762.56	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=9.058;DP=469;FS=5.723;HRun=0;HaplotypeScore=112.7724;InbreedingCoeff=0.9934;MQ=73.32;MQ0=0;MQRankSum=-8.413;QD=42.37;ReadPosRankSum=-3.104;VQSLOD=5.5085;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,28:29:69.17:1150,69,0	1/1:3,5:8:24.03:333,24,0	0/0:18,0:16:35.02:0,35,383	0/0:10,0:8:13.61:0,14,110	1/1:3,18:21:57.18:961,57,0	0/0:20,0:20:47.12:0,47,449	0/0:14,0:14:27.05:0,27,265	1/1:4,16:20:57.06:857,57,0	0/0:11,0:11:24.07:0,24,376	0/0:14,0:14:38.32:0,38,365	0/0:18,0:18:39.96:0,40,400	0/0:22,0:22:63.05:0,63,623	0/0:9,0:9:18.49:0,18,172	0/0:21,0:21:57.11:0,57,568	0/0:18,0:18:50.76:0,51,558	0/0:18,0:18:51.11:0,51,530	0/0:29,0:29:72.13:0,72,710	0/0:25,0:25:63.13:0,63,627	0/0:17,0:17:47.35:0,47,513	0/0:15,0:15:45.09:0,45,508	0/0:17,0:17:39.08:0,39,388	0/0:9,0:9:26.98:0,27,249	0/0:19,0:19:34.61:0,35,337	0/0:9,0:9:24.02:0,24,225	1/1:0,14:14:27.09:470,27,0	1/1:1,16:17:51.17:878,51,0	1/1:3,10:13:36.03:537,36,0	1/1:1,13:14:33.11:577,33,0
chr10	19615271	.	AG	A	7217.83	PASS	AB=0.952;AC=51;AF=0.911;AN=56;BaseQRankSum=-2.423;DP=464;FS=0.000;HRun=8;HaplotypeScore=90.5205;InbreedingCoeff=0.7933;MQ=75.22;MQ0=0;MQRankSum=-2.779;QD=16.26;ReadPosRankSum=3.905;VQSLOD=4.8134;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:29:49.13:162,49,0	1/1:7,0:7:11.56:39,12,0	0/1:19,0:18:1.32:1,0,102	0/0:10,0:8:4.84:0,5,34	1/1:21,0:21:39.64:132,40,0	1/1:3,17:20:42.06:405,42,0	1/1:1,12:13:24.04:231,24,0	1/1:18,0:18:35.12:129,35,0	0/0:0,0:10:19.89:0,20,100	1/1:0,14:14:41.97:386,42,0	1/1:4,14:18:41.84:364,42,0	1/1:3,19:22:63.09:603,63,0	1/1:2,7:9:14.98:145,15,0	1/1:1,20:21:57.09:549,57,0	1/1:6,12:18:36.04:347,36,0	1/1:3,15:18:48.07:463,48,0	1/1:3,26:29:69.11:665,69,0	1/1:1,24:25:63.10:607,63,0	1/1:4,13:17:38.96:360,39,0	1/1:6,8:14:27.77:269,28,0	1/1:0,17:17:39.06:376,39,0	1/1:1,7:8:20.97:191,21,0	1/1:2,17:19:35.94:326,36,0	1/1:3,6:9:15.02:145,15,0	1/1:14,0:14:20.36:67,20,0	1/1:17,0:17:36.59:116,37,0	1/1:13,0:13:19.97:63,20,0	1/1:14,0:14:24.42:78,24,0
chr10	19615279	.	GT	G	1138.96	PASS	AB=0.978;AC=26;AF=0.464;AN=56;BaseQRankSum=-6.806;DP=495;FS=4.470;HRun=1;HaplotypeScore=113.0779;InbreedingCoeff=0.2714;MQ=72.33;MQ0=0;MQRankSum=6.510;QD=3.67;ReadPosRankSum=10.073;VQSLOD=-0.4387;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:95.25:0,95,528	0/0:6,0:6:16.77:0,17,90	0/0:17,0:15:13.11:0,13,260	0/1:9,0:8:4.08:4,0,59	0/0:20,0:20:34.55:0,35,191	0/1:20,0:20:23.27:60,0,23	0/1:15,0:15:19.66:20,0,49	0/0:26,0:26:69.82:0,70,436	0/0:12,0:12:26.55:0,27,169	0/1:17,0:17:39.47:39,0,60	1/1:16,1:17:4.28:84,4,0	1/1:21,1:22:28.33:157,28,0	1/1:7,1:8:11.12:52,11,0	0/1:22,1:23:3.85:111,0,4	1/1:12,1:13:24.73:96,25,0	1/1:15,2:17:32.77:132,33,0	0/1:32,2:34:69.26:148,0,69	1/1:27,1:28:9.45:128,9,0	0/1:20,1:21:46.14:46,0,143	0/1:11,1:12:18.08:97,0,18	1/1:18,0:18:1.82:43,2,0	0/1:8,0:8:7.85:33,0,8	1/1:17,1:18:22.31:68,22,0	0/1:10,0:10:10.53:11,0,67	0/0:17,0:17:26.64:0,27,126	0/0:18,0:18:50.54:0,51,271	0/0:13,0:13:27.91:0,28,163	0/0:14,0:14:22.56:0,23,120
chr10	19616006	.	GGGAC	G	12144.96	PASS	AB=1.000;AC=37;AF=0.661;AN=56;BaseQRankSum=10.549;DP=497;FS=23.351;HRun=0;HaplotypeScore=135.0057;InbreedingCoeff=0.8563;MQ=76.08;MQ0=0;MQRankSum=-11.749;QD=31.55;ReadPosRankSum=9.442;VQSLOD=2.8291;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:45.10:0,45,686	0/0:5,0:5:11.98:0,12,150	0/0:25,0:22:24.65:0,25,604	0/0:19,0:18:7.68:0,8,262	0/0:4,0:4:6:0,6,85	1/1:0,19:19:42.14:672,42,0	1/1:3,16:19:39.60:628,40,0	1/1:12,2:14:12.66:132,13,0	0/1:15,0:15:12.58:13,0,381	1/1:2,17:19:49.93:793,50,0	1/1:3,10:13:30.10:464,30,0	1/1:10,24:34:84.70:1208,85,0	1/1:5,23:28:52.99:805,53,0	1/1:9,23:32:75.83:1141,76,0	1/1:7,29:36:85.83:1414,86,0	1/1:9,17:26:61.13:871,61,0	1/1:4,15:19:33.01:486,33,0	1/1:6,8:14:28.88:402,29,0	1/1:8,4:12:24.89:261,25,0	1/1:1,20:21:57.19:906,57,0	1/1:7,14:20:35.25:502,35,0	1/1:2,15:17:39.13:614,39,0	1/1:1,13:14:36.12:578,36,0	1/1:3,9:12:18.64:255,19,0	0/0:8,0:8:21.07:0,21,334	0/0:10,0:10:24.04:0,24,394	0/0:19,0:19:45.56:0,46,808	0/0:1,0:1:3.01:0,3,42
chr10	19616014	.	G	GC	470.24	PASS	AB=0.969;AC=17;AF=0.304;AN=56;BaseQRankSum=1.977;DP=486;FS=26.267;HRun=0;HaplotypeScore=160.0705;InbreedingCoeff=-0.1052;MQ=66.93;MQ0=0;MQRankSum=-3.913;QD=1.49;ReadPosRankSum=0.307;VQSLOD=0.8943;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:29.89:0,30,250	0/0:3,0:3:5.98:0,6,47	0/0:20,0:17:38.83:0,39,360	0/0:14,0:13:27.47:0,27,206	0/0:7,0:7:8.99:0,9,76	0/1:21,0:21:3.70:5,0,4	1/1:18,1:19:6.50:83,6,0	0/1:10,2:12:27.50:28,0,57	0/0:12,0:12:26.34:0,26,200	0/1:20,0:20:14.41:14,0,34	0/1:13,0:13:7.70:34,0,8	0/1:34,0:34:38.72:39,0,100	0/1:26,0:26:19.85:57,0,20	0/1:30,2:32:8.86:96,0,9	0/0:37,0:37:3.36:0,3,93	0/0:20,0:20:8.68:0,9,61	0/1:19,0:19:19.51:20,0,22	0/1:13,0:13:1.41:36,0,1	0/1:11,2:13:63.33:63,0,91	0/1:22,0:22:5.30:27,0,5	0/1:23,2:24:21.96:49,0,22	0/1:16,0:16:1.12:13,0,1	0/1:15,0:15:5.67:16,0,6	0/1:15,1:16:36.83:46,0,37	0/0:6,0:6:15.01:0,15,147	0/0:10,0:10:23.97:0,24,218	0/0:22,0:22:53.46:0,53,492	0/0:4,0:4:11.99:0,12,102
chr10	19616018	.	G	GA	3057.75	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=9.137;DP=488;FS=6.264;HRun=0;HaplotypeScore=151.3806;InbreedingCoeff=0.9728;MQ=68.90;MQ0=0;MQRankSum=-8.688;QD=8.59;ReadPosRankSum=9.518;VQSLOD=1.9900;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:29.94:0,30,262	0/0:4,0:4:6:0,6,53	0/0:20,0:17:24.58:0,25,256	0/0:16,0:15:32.52:0,33,250	0/0:9,0:9:15:0,15,129	1/1:22,0:22:41.90:201,42,0	1/1:21,0:21:43.02:234,43,0	0/0:11,0:11:29.40:0,29,203	0/0:13,0:13:22.73:0,23,176	1/1:23,0:23:55.81:308,56,0	1/1:12,0:12:21.70:87,22,0	1/1:33,0:33:66.70:291,67,0	1/1:27,0:27:47.13:216,47,0	1/1:29,3:32:61.98:332,62,0	1/1:34,0:34:70.23:278,70,0	1/1:17,0:17:31.74:101,32,0	1/1:21,0:21:32.16:146,32,0	1/1:12,1:13:34.66:171,35,0	1/1:9,0:9:25.46:192,25,0	1/1:24,0:24:46:192,46,0	1/1:23,0:22:32.03:172,32,0	1/1:16,0:16:28.96:127,29,0	1/1:16,0:16:20.24:119,20,0	1/1:13,0:13:18.70:114,19,0	0/0:7,0:7:17.95:0,18,161	0/0:10,0:10:20.95:0,21,189	0/0:23,0:23:56.67:0,57,510	0/0:5,0:5:11.99:0,12,101
chr10	19616164	.	T	TCA	978.21	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-7.805;DP=720;FS=2.988;HRun=0;HaplotypeScore=87.6190;InbreedingCoeff=0.9995;MQ=85.82;MQ0=0;MQRankSum=0.230;QD=37.62;ReadPosRankSum=-3.418;VQSLOD=4.2652;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,111,1472	0/0:11,0:11:33.09:0,33,429	0/0:26,0:26:69.22:0,69,937	0/0:30,0:30:72.16:0,72,929	0/0:23,0:23:63.13:0,63,792	0/0:22,0:22:57.18:0,57,780	0/0:27,0:27:75.24:0,75,1030	1/1:5,20:26:63.19:1073,63,0	0/0:25,0:25:66.22:0,66,922	0/0:19,0:19:45.15:0,45,630	0/0:20,0:20:53.90:0,54,708	0/0:25,0:25:69.22:0,69,946	0/0:23,0:23:69.19:0,69,942	0/0:25,0:25:69.22:0,69,946	0/0:37,0:37:99:0,105,1429	0/0:25,0:25:72.24:0,72,1001	0/0:28,0:28:84.24:0,84,1134	0/0:20,0:20:51.17:0,51,713	0/0:21,0:21:54.14:0,54,692	0/0:26,0:26:72.24:0,72,1007	0/0:51,0:51:99:0,138,1911	0/0:31,0:31:87.27:0,87,1185	0/0:24,0:24:69.17:0,69,909	0/0:34,0:34:99:0,99,1349	0/0:12,0:12:36.09:0,36,470	0/0:36,0:36:99:0,108,1474	0/0:22,0:22:66.19:0,66,902	0/0:12,0:12:36.07:0,36,452
chr10	19616579	.	TTG	T	16992.45	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=6.728;DP=653;FS=10.167;HRun=0;HaplotypeScore=99.1182;InbreedingCoeff=0.9966;MQ=74.15;MQ0=1;MQRankSum=-6.053;QD=30.45;ReadPosRankSum=7.684;VQSLOD=6.1611;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,0:30:32.90:367,33,0	1/1:0,0:11:24.17:245,24,0	0/0:31,0:27:29.68:0,30,866	0/0:18,0:17:48.02:0,48,674	1/1:1,0:35:71.31:720,71,0	1/1:0,22:22:36.12:546,36,0	1/1:0,24:24:42.14:643,42,0	0/0:23,0:23:63.18:0,63,955	0/0:23,0:23:69.23:0,69,1183	1/1:0,24:24:65.73:949,66,0	1/1:1,23:24:69.19:1011,69,0	1/1:0,23:23:54.18:827,54,0	1/1:0,17:17:48.08:729,48,0	1/1:1,22:23:54.18:827,54,0	1/1:1,31:32:75.25:1149,75,0	1/1:0,19:19:36.12:551,36,0	1/1:0,26:26:48.16:735,48,0	1/1:1,22:23:51.17:775,51,0	1/1:1,29:29:84.27:1192,84,0	1/1:1,33:33:81.16:1142,81,0	1/1:1,15:16:36.12:551,36,0	1/1:0,30:30:84.28:1219,84,0	1/1:0,20:20:45.62:684,46,0	1/1:0,26:26:63.21:965,63,0	1/1:1,0:21:29.82:241,30,0	1/1:0,1:15:41.98:369,42,0	1/1:0,0:22:47.91:402,48,0	1/1:0,0:11:17.97:153,18,0
chr10	19617487	.	AT	A	722.76	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.968;DP=652;FS=4.257;HRun=3;HaplotypeScore=66.9407;InbreedingCoeff=0.9996;MQ=88.80;MQ0=0;MQRankSum=-2.293;QD=31.42;ReadPosRankSum=1.417;VQSLOD=3.9366;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:81.27:0,81,1202	0/0:11,0:11:33.11:0,33,495	0/0:27,0:28:78.39:0,78,1152	0/0:22,0:22:59.61:0,60,871	0/0:34,0:34:99:0,102,1489	0/0:37,0:37:99:0,111,1621	0/0:25,0:25:72.23:0,72,1056	0/0:30,0:30:90.27:0,90,1276	1/1:0,23:23:63.20:818,63,0	0/0:29,0:28:78.26:0,78,1151	0/0:21,0:21:63.21:0,63,942	0/0:18,0:18:54.18:0,54,806	0/0:22,0:22:63.20:0,63,924	0/0:20,0:20:60.20:0,60,895	0/0:30,0:30:90.30:0,90,1346	0/0:18,0:18:51.17:0,51,764	0/0:27,0:27:78.26:0,78,1161	0/0:17,0:17:48.14:0,48,696	0/0:15,0:15:45.14:0,45,656	0/0:21,0:21:60.19:0,60,874	0/0:19,0:19:57.19:0,57,851	0/0:20,0:20:60.19:0,60,879	0/0:20,0:20:54.18:0,54,807	0/0:20,0:20:60.20:0,60,897	0/0:22,0:22:66.22:0,66,988	0/0:23,0:23:66.22:0,66,988	0/0:40,0:39:99:0,120,1755	0/0:12,0:12:36.12:0,36,540
chr10	19617588	.	C	CA	27555.93	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-8.757;DP=751;FS=3.317;HRun=1;HaplotypeScore=74.6204;InbreedingCoeff=0.9963;MQ=72.84;MQ0=0;MQRankSum=-7.128;QD=40.40;ReadPosRankSum=7.362;VQSLOD=4.5647;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,47:48:99:1962,132,0	1/1:0,7:7:21.07:315,21,0	0/0:27,0:24:72.15:0,72,882	0/0:36,0:31:65.86:0,66,971	1/1:1,28:29:84.13:1181,84,0	1/1:1,33:34:87.29:1303,87,0	1/1:0,18:19:54.17:789,54,0	1/1:2,27:29:84.28:1255,84,0	1/1:1,28:29:87.23:1261,87,0	1/1:2,25:27:78.26:1160,78,0	1/1:1,18:19:48.16:719,48,0	1/1:1,26:27:81.27:1205,81,0	1/1:0,34:34:87.29:1303,87,0	1/1:0,28:28:78.26:1168,78,0	1/1:1,30:31:87.29:1303,87,0	1/1:1,27:28:75.25:1124,75,0	1/1:1,28:29:84.22:1231,84,0	1/1:1,18:18:45.15:657,45,0	1/1:3,17:20:48.12:677,48,0	1/1:0,23:23:69.19:1009,69,0	1/1:0,43:43:99:1638,111,0	1/1:1,10:11:27.09:404,27,0	1/1:0,22:22:57.12:853,57,0	1/1:1,28:29:69.23:1034,69,0	1/1:0,21:21:60.20:899,60,0	1/1:2,33:35:99:1488,102,0	1/1:0,32:32:84.28:1258,84,0	1/1:0,9:9:24.08:360,24,0
chr10	19617649	.	CT	C	760.92	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.520;DP=735;FS=7.199;HRun=2;HaplotypeScore=104.3117;InbreedingCoeff=0.9450;MQ=85.51;MQ0=1;MQRankSum=-4.183;QD=25.36;ReadPosRankSum=1.756;VQSLOD=2.9644;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,132,1872	0/0:3,0:3:9:0,9,112	0/0:29,0:29:78.11:0,78,1108	0/0:24,0:24:63.13:0,63,905	0/0:27,0:27:78.12:0,78,1054	0/0:26,0:26:78.26:0,78,1159	0/0:19,0:19:57.16:0,57,813	0/0:29,0:29:81.27:0,81,1214	1/1:5,25:30:66.21:856,66,0	0/0:29,0:29:84.25:0,84,1235	0/0:19,0:19:54.17:0,54,788	0/0:33,0:33:96.32:0,96,1415	0/0:26,0:25:69.22:0,69,1014	0/0:29,0:29:87.26:0,87,1270	0/0:28,0:28:78.25:0,78,1150	0/0:22,0:22:63.21:0,63,943	0/0:34,0:34:99:0,99,1464	0/0:18,0:17:48.08:0,48,669	0/0:17,0:17:48.16:0,48,720	0/0:24,0:24:69.22:0,69,1014	0/0:44,0:44:99:0,111,1653	0/0:15,0:15:45.15:0,45,670	0/0:22,0:22:60.20:0,60,899	0/0:30,0:30:84.27:0,84,1228	0/0:23,0:23:63.21:0,63,933	0/0:29,0:29:81.27:0,81,1214	0/0:41,0:41:99:0,117,1676	0/0:15,0:15:42.14:0,42,630
chr10	19617901	.	A	ATTT	634.76	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=-0.752;DP=591;FS=6.651;HRun=7;HaplotypeScore=81.9489;InbreedingCoeff=0.6130;MQ=69.94;MQ0=0;MQRankSum=-0.486;QD=18.14;ReadPosRankSum=-2.703;VQSLOD=-0.1798;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,120,1618	0/0:5,0:5:9.02:0,9,123	0/0:24,0:22:28.18:0,28,486	0/1:20,0:20:15.01:15,0,378	0/0:31,0:31:78.22:0,78,1047	0/0:31,0:31:90.29:0,90,1212	0/0:11,0:11:33.11:0,33,450	0/0:38,0:38:99:0,99,1301	1/1:2,13:15:36.12:724,36,0	0/0:24,0:24:72.23:0,72,968	0/0:31,0:31:87.25:0,87,1153	0/0:20,0:20:54.15:0,54,704	0/0:24,0:24:57.16:0,57,761	0/0:13,0:13:39.11:0,39,514	0/0:17,0:17:45.15:0,45,612	0/0:18,0:18:48.15:0,48,655	0/0:20,0:20:57.18:0,57,778	0/0:7,0:7:21.01:0,21,248	0/0:24,0:24:66.22:0,66,901	0/0:24,0:24:66.21:0,66,900	0/0:21,0:21:57.18:0,57,775	0/0:15,0:15:42.11:0,42,540	0/0:22,0:22:54.15:0,54,719	0/0:17,0:17:39.07:0,39,511	0/0:18,0:18:45.13:0,45,613	0/0:24,0:24:69.23:0,69,941	0/0:29,0:29:75.23:0,75,1021	0/0:5,0:5:12.02:0,12,147
chr10	19619175	.	GACA	G	722.89	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.892;DP=668;FS=6.969;HRun=0;HaplotypeScore=90.0168;InbreedingCoeff=0.9910;MQ=86.03;MQ0=0;MQRankSum=-2.475;QD=36.14;ReadPosRankSum=1.197;VQSLOD=4.1008;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,114,2583	0/0:6,0:6:18.06:0,18,411	0/0:23,0:23:66.22:0,66,1453	0/0:21,0:21:54.16:0,54,1111	0/0:16,0:16:48.16:0,48,1075	0/0:33,0:33:90.27:0,90,1994	0/0:32,0:32:93.26:0,93,2006	0/0:32,0:32:93.27:0,93,1990	1/1:0,20:20:48.16:818,48,0	0/0:20,0:19:57.20:0,57,1311	0/0:19,0:19:57.17:0,57,1198	0/0:26,0:26:78.27:0,78,1799	0/0:25,0:25:72.23:0,72,1591	0/0:29,0:29:84.27:0,84,1847	0/0:19,0:19:54.17:0,54,1112	0/0:27,0:27:78.25:0,78,1751	0/0:22,0:22:63.22:0,63,1450	0/0:18,0:18:48.16:0,48,1091	0/0:30,0:30:87.29:0,87,1925	0/0:23,0:23:66.23:0,66,1521	0/0:27,0:27:81.26:0,81,1740	0/0:32,0:32:96.33:0,96,2178	0/0:24,0:24:69.21:0,69,1474	0/0:22,0:22:66.23:0,66,1514	0/0:13,0:13:39.07:0,39,848	0/0:25,0:25:72.24:0,72,1618	0/0:30,0:30:81.25:0,81,1757	0/0:9,0:9:27.09:0,27,584
chr10	19619335	.	AACACACACACACACAC	A	1348.40	PASS	AC=6;AF=0.111;AN=54;BaseQRankSum=5.101;DP=597;FS=7.877;HRun=0;HaplotypeScore=280.9589;InbreedingCoeff=0.9406;MQ=54.63;MQ0=10;MQRankSum=-3.475;QD=24.97;ReadPosRankSum=-1.474;VQSLOD=0.8736;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:28:21.07:0,21,716	0/0:10,0:10:24.08:0,24,983	0/0:15,0:8:12.04:0,12,365	./.	0/0:19,0:19:33.11:0,33,1749	0/0:27,0:28:63.22:0,63,3980	0/0:16,0:16:30.10:0,30,1524	1/1:16,11:25:33.10:756,33,0	1/1:9,5:13:16.99:567,17,0	0/0:28,0:28:69.17:0,69,3695	0/0:28,0:28:69.22:0,69,3859	0/0:21,0:21:45.15:0,45,3055	0/0:20,0:20:51.15:0,51,2901	0/0:16,0:16:30.10:0,30,1899	1/1:8,0:13:6.02:158,6,0	0/0:25,0:24:45.15:0,45,2602	0/0:28,0:27:69.22:0,69,4117	0/0:16,0:16:30.10:0,30,1580	0/0:8,0:8:18.06:0,18,803	0/0:23,0:23:51.18:0,51,3019	0/0:39,0:37:65.87:0,66,4330	0/0:27,0:27:54.17:0,54,3190	0/0:26,0:26:32.51:0,33,2708	0/0:20,0:20:33.58:0,34,1883	0/0:20,0:20:36.11:0,36,1541	0/0:16,0:16:42.14:0,42,2372	0/0:30,0:32:75.17:0,75,3469	0/0:16,0:16:39.13:0,39,1426
chr10	19619369	.	CAT	C	3798.48	PASS	AB=0.965;AC=30;AF=0.556;AN=54;BaseQRankSum=-7.703;DP=570;FS=20.664;HRun=0;HaplotypeScore=145.9709;InbreedingCoeff=-0.2309;MQ=53.78;MQ0=5;MQRankSum=1.826;QD=7.42;ReadPosRankSum=-6.170;VQSLOD=0.7436;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:21:8.18:71,8,0	1/1:9,0:9:14.45:81,14,0	0/0:1,0:1:1.55:0,2,4	./.	1/1:15,0:14:11.67:72,12,0	0/1:28,0:28:99:134,0,151	0/1:23,0:22:38.48:270,0,38	0/0:37,0:35:73.98:0,74,595	0/0:11,0:11:19.83:0,20,114	0/1:32,1:33:99:293,0,155	0/1:25,2:27:99:201,0,152	0/1:24,1:25:99:221,0,126	0/1:25,0:25:99:184,0,123	0/1:18,0:18:42.14:178,0,42	0/0:7,0:7:9.03:0,9,50	0/1:22,0:21:99:227,0,127	0/1:28,2:29:97.19:269,0,97	0/1:22,0:21:9.06:181,0,9	0/1:6,4:10:2.54:85,0,3	0/1:21,1:22:99:151,0,181	0/1:42,0:39:99:187,0,315	0/1:28,0:28:99:185,0,112	0/1:24,1:25:99:212,0,123	0/1:21,0:21:58.52:59,0,115	1/1:17,0:17:16.63:104,17,0	1/1:18,1:18:29.02:164,29,0	1/1:16,0:16:27.87:145,28,0	1/1:13,0:12:25.22:126,25,0
chr10	19619383	.	TATATTC	T	3204.35	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=5.950;DP=571;FS=5.001;HRun=0;HaplotypeScore=185.0743;InbreedingCoeff=0.9038;MQ=57.32;MQ0=1;MQRankSum=-9.240;QD=34.09;ReadPosRankSum=-0.178;VQSLOD=3.0727;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,12:18:13.69:348,14,0	1/1:1,5:6:15.05:368,15,0	0/0:11,0:8:15.52:0,16,293	0/1:9,0:5:6.25:6,0,39	1/1:2,8:9:11.75:254,12,0	0/0:23,0:23:66.14:0,66,1593	0/0:23,0:23:63.16:0,63,1341	0/0:37,0:37:99:0,108,2907	0/0:17,0:17:46.22:0,46,1025	0/0:27,0:27:77.89:0,78,1642	0/0:23,0:23:66.15:0,66,1406	0/0:26,0:26:69.20:0,69,1500	0/0:24,0:24:69.23:0,69,1519	0/0:23,0:23:57.20:0,57,1204	0/0:12,0:12:27.09:0,27,574	0/0:26,0:25:46.44:0,46,1571	0/0:33,0:32:82.67:0,83,1580	0/0:22,0:21:13.07:0,13,1071	0/0:10,0:10:30.07:0,30,563	0/0:26,0:26:75.24:0,75,1914	0/0:38,0:36:99:0,103,2270	0/0:24,0:24:66.20:0,66,1511	0/0:26,0:26:54.08:0,54,1480	0/0:26,0:25:60.25:0,60,1209	1/1:1,11:12:17.49:400,17,0	1/1:4,11:14:23.97:673,24,0	1/1:1,11:12:30.10:701,30,0	1/1:0,11:11:27.09:651,27,0
chr10	19619385	.	TATTC	T	1816.87	PASS	AB=1.000;AC=16;AF=0.286;AN=56;BaseQRankSum=9.955;DP=563;FS=3.085;HRun=0;HaplotypeScore=166.5136;InbreedingCoeff=0.8376;MQ=57.35;MQ0=1;MQRankSum=-8.502;QD=16.22;ReadPosRankSum=-0.845;VQSLOD=3.5061;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:17,1:17:14.14:201,14,0	1/1:6,0:6:15.05:198,15,0	0/0:12,0:9:21:0,21,358	0/1:10,0:6:3.12:3,0,88	1/1:9,0:8:11.99:186,12,0	0/0:22,0:22:60.20:0,60,1129	0/0:25,0:25:69.15:0,69,1034	0/0:37,0:37:99:0,111,2335	0/0:18,0:18:47.65:0,48,908	0/0:28,0:28:77.59:0,78,1234	0/0:23,0:23:48.33:0,48,948	0/0:24,0:24:66.64:0,67,1048	0/0:23,0:23:66.68:0,67,1125	0/0:20,0:20:60.15:0,60,927	0/0:12,0:12:27.09:0,27,502	0/0:28,0:27:51.38:0,51,1252	0/0:31,0:30:57.56:0,58,1119	0/1:21,0:20:22.45:22,0,764	0/0:11,0:11:32.99:0,33,510	0/0:25,0:25:72.22:0,72,1401	0/0:38,1:37:96.01:0,96,1532	0/0:23,0:23:66.01:0,66,1125	0/0:24,0:24:67.88:0,68,1109	0/0:25,1:25:54.59:0,55,888	1/1:11,1:12:17.92:262,18,0	1/1:13,0:12:32.49:413,32,0	1/1:11,1:12:30.10:382,30,0	1/1:11,0:11:27.09:345,27,0
chr10	19619412	.	TAC	T	804.94	PASS	AB=0.651;AC=9;AF=0.173;AN=52;BaseQRankSum=4.191;DP=620;FS=13.817;HRun=0;HaplotypeScore=130.2282;InbreedingCoeff=0.7571;MQ=57.01;MQ0=4;MQRankSum=-0.553;QD=12.98;ReadPosRankSum=-0.108;VQSLOD=2.7819;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:8,7:14:0.01:0,0,0	./.	0/0:36,0:22:50.87:0,51,810	0/0:29,0:10:15.90:0,16,195	0/1:1,4:5:0:0,0,0	0/0:24,0:24:62.87:0,63,1045	0/0:25,0:25:60.12:0,60,998	0/0:37,0:35:99:0,102,1666	1/1:3,20:23:7.15:632,7,0	0/0:34,0:34:96.28:0,96,1558	0/0:26,0:26:72.20:0,72,1194	0/0:27,0:27:75.26:0,75,1277	0/0:27,0:27:78.22:0,78,1285	0/0:22,0:22:66.22:0,66,1125	0/0:12,0:12:27.09:0,27,468	0/0:28,0:27:75.23:0,75,1252	0/0:42,0:41:99:0,100,1706	0/0:26,1:26:72.02:0,72,1127	0/0:13,0:12:30.09:0,30,494	0/0:27,0:27:78.24:0,78,1284	0/0:30,0:30:75.73:0,76,1243	0/0:24,0:24:72.25:0,72,1242	0/0:28,0:28:81.27:0,81,1371	0/0:27,1:27:56.86:0,57,959	./.	0/1:3,2:5:1.97:69,0,2	1/1:4,3:7:6.02:75,6,0	1/1:3,4:7:8.60:154,9,0
chr10	19619454	.	CATT	C	99.87	PASS	AB=0.900;AC=4;AF=0.080;AN=50;BaseQRankSum=5.049;DP=631;FS=17.584;HRun=0;HaplotypeScore=119.4328;InbreedingCoeff=0.5609;MQ=67.87;MQ0=5;MQRankSum=-0.271;QD=9.08;ReadPosRankSum=-2.870;VQSLOD=1.6089;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:4,0:4:0.06:0,0,0	./.	0/0:41,0:28:50.06:0,50,1189	0/0:52,0:20:16.75:0,17,748	0/0:0,2:2:0:0,0,0	0/0:26,0:26:75.21:0,75,1714	0/0:27,0:27:75.23:0,75,1645	0/0:43,0:41:99:0,117,2722	0/0:23,0:23:66.18:0,66,1379	0/0:33,0:33:99:0,99,2320	0/0:26,0:26:72.25:0,72,1697	0/0:28,0:28:84.29:0,84,1959	0/0:26,0:26:78.25:0,78,1797	0/0:23,0:23:66.23:0,66,1530	0/0:17,0:17:51.17:0,51,1055	0/0:26,0:26:75.26:0,75,1773	0/0:37,1:36:99:0,102,2284	0/0:23,0:22:22.22:0,22,1354	0/0:15,0:15:45.15:0,45,1041	0/0:29,0:29:87.28:0,87,2005	0/0:36,1:37:99:0,99,2209	0/0:24,0:24:72.25:0,72,1693	0/0:26,0:26:78.27:0,78,1773	0/0:34,0:33:81.14:0,81,1911	./.	0/1:3,1:4:91.79:92,0,102	1/1:0,3:3:6.02:101,6,0	./.
chr10	19619477	.	TAC	T	327.98	PASS	AB=0.846;AC=9;AF=0.173;AN=52;BaseQRankSum=7.733;DP=650;FS=11.021;HRun=0;HaplotypeScore=113.1641;InbreedingCoeff=0.7270;MQ=68.03;MQ0=6;MQRankSum=-0.243;QD=8.20;ReadPosRankSum=-2.745;VQSLOD=2.1846;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,2:9:2.72:23,3,0	1/1:2,0:2:2.92:17,3,0	0/0:43,0:26:24.32:0,24,622	0/0:55,0:28:41.99:0,42,552	1/1:7,3:10:8.84:106,9,0	0/0:35,0:35:99:0,102,1780	0/0:23,0:23:62.89:0,63,1087	0/0:37,0:36:99:0,108,1791	0/0:24,0:24:60.17:0,60,1039	0/0:35,0:35:99:0,105,1881	0/0:27,0:27:75.20:0,75,1324	0/0:24,0:24:69.20:0,69,1215	0/0:25,0:25:69.20:0,69,1241	0/0:21,0:21:63.09:0,63,957	0/0:18,0:18:48.14:0,48,838	0/0:26,0:26:75.22:0,75,1303	0/0:40,0:38:99:0,111,1917	0/0:17,0:17:51.05:0,51,884	0/0:17,0:17:35.29:0,35,636	0/0:25,0:25:75.24:0,75,1382	0/0:35,0:35:93.19:0,93,1609	0/0:24,0:24:69.22:0,69,1224	0/0:25,0:25:75.19:0,75,1272	0/0:29,0:28:72.09:0,72,1265	./.	0/1:9,2:10:33.03:184,0,33	1/1:5,3:8:11.37:134,11,0	./.
chr10	19619640	.	TC	T	575.69	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.334;DP=597;FS=0.000;HRun=1;HaplotypeScore=53.3018;InbreedingCoeff=0.9763;MQ=66.70;MQ0=1;MQRankSum=0.202;QD=31.98;ReadPosRankSum=0.522;VQSLOD=3.1571;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:84.09:0,84,1192	0/0:8,0:8:24.05:0,24,329	0/0:22,0:20:46.51:0,47,804	0/0:13,0:12:14.54:0,15,421	0/0:21,0:21:63.21:0,63,996	0/0:25,0:25:72.25:0,72,1149	0/0:15,0:15:45.14:0,45,687	0/0:34,0:34:99:0,102,1601	0/0:21,0:21:21.81:0,22,909	0/0:34,0:34:99:0,102,1537	0/0:29,0:29:84.24:0,84,1270	0/0:21,0:21:63.20:0,63,983	0/0:20,0:20:60.17:0,60,910	0/0:16,0:16:48.16:0,48,756	1/1:0,18:18:48.16:671,48,0	0/0:20,0:20:60.18:0,60,910	0/0:30,0:30:90.31:0,90,1435	0/0:14,0:14:39.11:0,39,597	0/0:18,0:17:51.14:0,51,749	0/0:34,0:34:99:0,99,1579	0/0:20,0:20:60.19:0,60,927	0/0:19,0:19:54.18:0,54,858	0/0:17,0:17:51.17:0,51,812	0/0:22,0:22:63.18:0,63,958	0/0:18,0:18:54.17:0,54,838	0/0:22,0:22:66.16:0,66,962	0/0:28,0:28:84.22:0,84,1245	0/0:9,0:9:27.09:0,27,431
chr10	19620033	.	A	AAGGAAGGAAGG	28330.89	PASS	AB=0.952;AC=28;AF=0.500;AN=56;BaseQRankSum=2.849;DP=714;FS=59.034;HRun=0;HaplotypeScore=320.9656;InbreedingCoeff=-0.6964;MQ=51.46;MQ0=3;MQRankSum=-10.207;QD=41.91;ReadPosRankSum=9.901;VQSLOD=2.0424;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:20,0:20:99:717,0,157	0/1:10,0:10:61.65:303,0,62	0/0:20,0:15:41.08:0,41,610	0/0:18,0:11:30.09:0,30,685	0/1:45,0:45:99:1322,0,269	0/1:28,0:27:99:1095,0,116	0/1:29,0:28:38.69:802,0,39	0/1:41,0:34:55.38:518,0,55	0/1:20,0:23:27.13:1714,0,27	1/1:27,4:31:12.64:1778,13,0	0/1:18,5:23:17:1203,0,17	0/1:26,1:27:95.77:1202,0,96	0/1:17,8:24:37.06:1572,0,37	1/1:22,4:26:13.22:1387,13,0	0/1:27,0:27:54.23:1224,0,54	0/1:26,0:26:13.52:1867,0,14	0/1:20,0:20:49.60:1180,0,50	0/1:17,0:16:33.72:626,0,34	0/1:17,1:17:99:394,0,111	0/1:36,5:41:99:1642,0,100	0/1:15,0:14:87.47:183,0,87	0/1:14,5:19:21.04:1016,0,21	0/1:24,3:27:8.63:1428,0,9	0/1:18,2:20:51.02:518,0,51	0/1:33,0:33:99:1574,0,136	0/1:30,0:30:99:1079,0,99	0/1:35,0:34:7.29:1387,0,7	0/1:19,0:19:59.09:600,0,59
chr10	19621414	.	CAA	C	2672.70	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=11.127;DP=822;FS=6.298;HRun=3;HaplotypeScore=116.0173;InbreedingCoeff=0.9997;MQ=85.65;MQ0=2;MQRankSum=-3.848;QD=39.30;ReadPosRankSum=1.940;VQSLOD=3.0271;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,105,1963	0/0:13,0:13:39.13:0,39,733	0/0:17,0:17:51.14:0,51,813	0/0:35,0:35:99:0,101,1641	0/0:19,0:19:57.19:0,57,1070	0/0:25,0:25:75.23:0,75,1376	0/0:28,0:28:84.28:0,84,1566	0/0:35,0:35:93.28:0,93,1601	1/1:0,32:30:84.29:1284,84,0	0/0:40,0:40:99:0,120,2278	0/0:29,0:29:87.30:0,87,1676	0/0:25,0:25:75.26:0,75,1449	0/0:31,0:31:93.32:0,93,1784	0/0:36,0:36:99:0,105,1933	1/1:0,36:36:99:1510,99,0	0/0:32,1:33:53.40:0,53,1778	0/0:19,0:19:57.20:0,57,1101	0/0:21,0:21:63.22:0,63,1197	0/0:34,0:34:99:0,102,1854	0/0:39,0:39:99:0,117,2153	0/0:41,0:41:99:0,120,2233	0/0:36,0:36:99:0,102,1923	0/0:25,0:25:72.25:0,72,1384	0/0:28,0:28:84.28:0,84,1591	0/0:22,0:22:66.23:0,66,1275	0/0:39,0:39:99:0,117,2200	0/0:38,0:38:99:0,114,2096	0/0:10,0:10:30.10:0,30,579
chr10	19621894	.	T	TA	11148.79	PASS	AB=0.914;AC=38;AF=0.679;AN=56;BaseQRankSum=-4.846;DP=621;FS=1.033;HRun=8;HaplotypeScore=91.7004;InbreedingCoeff=0.8414;MQ=73.75;MQ0=0;MQRankSum=0.070;QD=27.06;ReadPosRankSum=0.093;VQSLOD=4.8378;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:22:59.06:0,59,526	0/0:16,0:16:39.01:0,39,357	0/1:11,1:13:13.11:13,0,165	0/1:8,0:9:18.01:18,0,117	0/0:35,0:35:96.05:0,96,878	1/1:2,26:28:72.21:831,72,0	1/1:1,13:14:33.10:381,33,0	0/0:31,0:31:84.02:0,84,759	1/1:1,19:20:45.13:519,45,0	1/1:7,33:40:99:1160,105,0	1/1:1,15:16:42.12:482,42,0	1/1:2,16:18:48.14:553,48,0	1/1:3,10:13:30.09:346,30,0	1/1:1,20:21:57.17:658,57,0	1/1:1,19:20:55.05:625,55,0	1/1:1,20:21:51.15:589,51,0	1/1:5,25:30:72.21:831,72,0	1/1:2,16:18:42.12:485,42,0	1/1:1,19:20:57.15:646,57,0	1/1:7,28:35:52.87:901,53,0	1/1:0,13:13:33.10:381,33,0	1/1:4,24:28:66.20:762,66,0	1/1:4,15:19:42.12:485,42,0	1/1:1,15:16:42.12:485,42,0	0/0:21,0:21:57.03:0,57,522	0/0:32,0:32:81.04:0,81,741	0/0:36,0:36:99:0,108,974	0/0:16,0:16:48.03:0,48,439
chr10	19622011	.	AC	A	15570.64	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=10.605;DP=521;FS=7.006;HRun=1;HaplotypeScore=146.3339;InbreedingCoeff=0.9297;MQ=89.07;MQ0=0;MQRankSum=-8.257;QD=35.15;ReadPosRankSum=6.898;VQSLOD=3.6446;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,41:41:93.30:1206,93,0	1/1:0,4:4:12.04:155,12,0	0/0:36,0:36:99:0,102,1600	0/0:12,0:12:33.06:0,33,479	1/1:0,22:22:51.17:661,51,0	1/1:0,20:20:60.20:778,60,0	1/1:1,18:19:54.18:700,54,0	0/0:30,0:30:87.30:0,87,1391	1/1:0,17:17:51.17:662,51,0	1/1:0,22:22:63.17:786,63,0	1/1:1,15:16:40.89:491,41,0	1/1:0,16:16:48.16:623,48,0	1/1:0,12:12:30.10:389,30,0	1/1:0,14:14:36.12:466,36,0	1/1:2,16:18:51.13:643,51,0	1/1:0,18:18:54.18:700,54,0	1/1:1,22:23:60.19:777,60,0	1/1:0,11:11:33.09:412,33,0	1/1:0,21:21:63.20:815,63,0	1/1:0,20:20:57.18:735,57,0	1/1:0,10:10:24.96:314,25,0	1/1:0,19:19:57.19:740,57,0	1/1:0,20:20:54.17:700,54,0	1/1:0,13:13:33.05:408,33,0	1/1:0,18:18:48.16:623,48,0	1/1:1,17:18:51.17:661,51,0	1/1:2,28:30:84.27:1087,84,0	1/1:0,1:1:3.01:39,3,0
chr10	19622413	.	T	TTGTGTGTGTGTGTG	2625.70	PASS	AB=0.899;AC=16;AF=0.286;AN=56;BaseQRankSum=4.858;DP=700;FS=4.108;HRun=0;HaplotypeScore=258.9511;InbreedingCoeff=0.5239;MQ=68.87;MQ0=14;MQRankSum=-4.282;QD=12.39;ReadPosRankSum=-1.760;VQSLOD=2.1107;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:8,14:28:3.01:201,3,0	1/1:4,0:11:6.02:290,6,0	0/0:58,0:30:1.54:0,2,158	0/1:40,0:26:4.13:4,0,31	0/1:11,0:11:80.08:95,0,80	0/1:23,0:26:0.18:0,0,889	0/0:25,0:25:51.16:0,51,1427	0/0:33,0:36:42.07:0,42,956	0/0:11,0:25:9.02:0,9,521	0/0:20,0:22:1.66:0,2,1296	0/0:9,0:9:21.05:0,21,692	0/0:20,0:22:51.15:0,51,1598	0/0:19,0:19:48.12:0,48,1513	0/0:23,0:27:69.23:0,69,2105	0/1:7,0:22:23.13:23,0,123	0/0:14,0:14:29.91:0,30,847	0/0:26,0:30:63.18:0,63,1911	0/0:13,0:14:21.04:0,21,591	0/0:20,0:20:24.02:0,24,542	0/0:6,0:21:20.58:0,21,557	0/0:47,0:50:57.04:0,57,2222	0/0:38,0:38:65.66:0,66,1769	0/0:18,0:18:36.10:0,36,1153	0/0:34,0:38:81.21:0,81,2480	1/1:5,0:25:3.01:147,3,0	1/1:25,0:24:30.03:864,30,0	1/1:13,0:13:27.09:801,27,0	1/1:5,1:10:6.02:366,6,0
chr10	19622439	.	GCA	G	706.95	PASS	AB=0.964;AC=15;AF=0.268;AN=56;BaseQRankSum=5.583;DP=585;FS=0.598;HRun=0;HaplotypeScore=103.8869;InbreedingCoeff=0.6179;MQ=63.32;MQ0=18;MQRankSum=-3.359;QD=4.71;ReadPosRankSum=-2.133;VQSLOD=2.3915;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,2:15:15.19:191,15,0	1/1:4,1:5:5.27:21,5,0	0/0:42,1:17:39.43:0,39,878	0/1:30,0:17:3.14:3,0,404	0/1:7,1:8:0.13:0,0,0	0/1:20,0:19:1.25:1,0,728	0/0:32,0:32:87.28:0,87,1531	0/0:26,0:26:78.13:0,78,1339	0/0:25,0:25:57.31:0,57,753	0/1:23,0:22:4.49:4,0,994	0/0:9,0:9:27.08:0,27,487	0/0:23,0:23:32.38:0,32,1001	0/0:19,0:19:54.18:0,54,1042	0/0:26,0:26:73.98:0,74,1333	0/0:16,0:16:38.86:0,39,433	0/1:13,1:14:8.66:9,0,586	0/0:29,0:29:63.28:0,63,1177	0/0:11,0:11:26.12:0,26,461	0/0:11,0:11:32.13:0,32,549	0/0:20,0:20:47.84:0,48,597	0/0:49,0:49:67.15:0,67,1820	0/0:30,0:29:75.08:0,75,1340	0/0:15,1:15:38.66:0,39,660	0/0:36,1:37:99:0,102,1796	0/0:10,3:13:0.83:0,1,3	1/1:17,1:17:37.77:411,38,0	1/1:10,3:13:21.38:204,21,0	1/1:4,0:4:5.48:24,5,0
chr10	19622479	.	CTGTGTG	C	824.98	PASS	AB=0.894;AC=30;AF=0.625;AN=48;BaseQRankSum=2.659;DP=522;FS=1.862;HRun=0;HaplotypeScore=123.4084;InbreedingCoeff=0.2695;MQ=59.62;MQ0=16;MQRankSum=1.076;QD=2.67;ReadPosRankSum=2.010;VQSLOD=2.5310;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:28:3.48:43,3,0	0/0:6,0:6:0:0,0,0	0/0:25,0:16:0:0,0,0	./.	0/0:7,0:7:0:0,0,0	1/1:9,2:11:3.01:30,3,0	1/1:24,1:24:2.86:24,3,0	0/0:18,0:18:0.47:0,0,1	0/0:19,0:20:2.51:0,3,16	0/1:18,0:17:1.09:50,0,1	./.	1/1:19,2:23:3.01:60,3,0	./.	1/1:23,1:22:6.01:86,6,0	0/1:16,0:15:6.85:24,0,7	1/1:7,4:11:6.02:120,6,0	1/1:24,0:26:7.43:86,7,0	1/1:10,1:10:3.01:60,3,0	1/1:7,1:7:3.01:60,3,0	1/1:13,2:15:5.91:58,6,0	0/0:44,0:44:0:0,0,0	0/1:17,7:25:0.19:0,0,0	0/1:7,2:8:0.07:0,0,0	1/1:28,0:28:6.47:77,6,0	1/1:17,0:18:3.47:26,3,0	0/0:27,0:26:7.51:0,8,60	1/1:9,0:10:7.86:124,8,0	./.
chr10	19624666	.	TA	T	12386.83	PASS	AB=1.000;AC=51;AF=0.911;AN=56;BaseQRankSum=7.507;DP=579;FS=5.083;HRun=9;HaplotypeScore=122.9612;InbreedingCoeff=0.8899;MQ=70.34;MQ0=0;MQRankSum=-1.656;QD=23.50;ReadPosRankSum=7.032;VQSLOD=3.4569;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:1,23:24:63.03:576,63,0	1/1:0,8:8:17.96:165,18,0	0/1:13,0:13:0.47:0,0,221	0/0:18,0:18:38.89:0,39,454	1/1:2,37:39:99:1016,111,0	1/1:3,13:16:39.02:357,39,0	1/1:3,21:24:54.02:494,54,0	0/0:33,0:33:90.27:0,90,1039	1/1:1,15:16:45.02:412,45,0	1/1:2,26:28:78.04:714,78,0	1/1:1,18:19:45:412,45,0	1/1:1,16:17:48.02:439,48,0	1/1:1,17:18:51.03:467,51,0	1/1:1,16:17:45.02:412,45,0	1/1:1,17:18:45.02:412,45,0	1/1:1,17:18:45.02:412,45,0	1/1:4,20:24:43.82:526,44,0	1/1:3,16:19:42.02:385,42,0	1/1:4,15:19:45.02:412,45,0	1/1:4,32:36:96.05:879,96,0	1/1:0,18:18:54.03:494,54,0	1/1:1,20:21:51.02:467,51,0	1/1:1,15:16:45.02:412,45,0	1/1:0,12:12:36.02:329,36,0	1/1:1,11:12:33.02:302,33,0	1/1:1,31:32:90.04:823,90,0	1/1:3,30:32:87.04:796,87,0	1/1:0,10:10:30.02:274,30,0
chr10	19625323	.	GA	G	7594.78	PASS	AB=0.773;AC=50;AF=0.893;AN=56;BaseQRankSum=-1.550;DP=575;FS=3.210;HRun=12;HaplotypeScore=84.8481;InbreedingCoeff=0.2250;MQ=69.02;MQ0=0;MQRankSum=-0.413;QD=13.83;ReadPosRankSum=5.369;VQSLOD=5.3530;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,17:25:38.22:387,38,0	1/1:1,5:7:13.98:99,14,0	0/1:18,2:16:39.76:40,0,139	0/1:22,0:18:21.72:22,0,93	1/1:10,15:26:21.74:332,22,0	1/1:2,15:20:41.95:296,42,0	1/1:3,14:17:35.86:279,36,0	0/0:10,0:25:51.29:0,51,283	1/1:5,16:21:48.28:372,48,0	1/1:10,10:23:2.51:172,3,0	1/1:3,14:17:41.81:325,42,0	1/1:2,13:16:37.89:284,38,0	1/1:5,8:13:23.86:185,24,0	1/1:2,9:11:23.91:186,24,0	1/1:5,13:19:37.87:282,38,0	1/1:3,20:25:57.65:429,58,0	1/1:4,13:17:32.86:256,33,0	0/1:8,8:16:22.22:168,0,22	1/1:6,14:20:32.80:252,33,0	1/1:9,23:33:64.72:493,65,0	1/1:1,14:15:35.87:279,36,0	1/1:3,22:26:55.80:424,56,0	1/1:8,23:31:62.70:488,63,0	1/1:3,13:16:35.86:279,36,0	1/1:6,12:19:34.88:261,35,0	1/1:11,18:32:59.10:419,59,0	1/1:4,16:21:46.84:354,47,0	0/1:6,13:19:41.76:234,0,42
chr10	19625380	.	CACACAA	C	4762.80	PASS	AB=0.998;AC=34;AF=0.607;AN=56;BaseQRankSum=-10.655;DP=552;FS=4.813;HRun=0;HaplotypeScore=177.3757;InbreedingCoeff=-0.3598;MQ=52.87;MQ0=13;MQRankSum=-0.757;QD=9.54;ReadPosRankSum=-5.183;VQSLOD=2.0974;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:22:17.21:236,17,0	0/1:9,0:9:1.91:81,0,2	0/0:22,0:12:8.68:0,9,104	0/0:31,0:17:12.04:0,12,212	1/1:15,0:14:26.94:217,27,0	0/1:21,0:21:99:138,0,375	0/1:19,0:19:99:101,0,181	1/1:33,0:32:78:609,78,0	1/1:11,1:12:23.99:220,24,0	0/1:19,0:18:99:222,0,128	0/1:25,0:25:99:157,0,378	0/1:19,0:19:40.63:41,0,314	0/1:15,0:15:39.90:40,0,438	0/1:16,0:16:99:119,0,171	1/1:14,7:21:54.01:722,54,0	0/1:19,0:19:99:187,0,202	0/1:10,0:10:21.89:22,0,226	0/1:13,0:13:57.20:57,0,151	0/1:24,0:21:99:265,0,122	0/1:24,1:25:99:186,0,311	0/1:31,0:27:23.48:23,0,348	0/1:21,0:21:99:160,0,181	0/1:29,0:29:57.89:58,0,447	0/1:28,0:27:96.73:97,0,361	1/1:9,0:9:1.67:111,2,0	1/1:15,0:15:23.16:325,23,0	1/1:24,0:23:47.48:331,47,0	0/1:4,0:4:8.67:39,0,9
chr10	19625382	.	CACAA	C	6387.33	PASS	AB=0.998;AC=36;AF=0.643;AN=56;BaseQRankSum=-9.728;DP=562;FS=0.420;HRun=0;HaplotypeScore=158.3708;InbreedingCoeff=-0.2643;MQ=52.80;MQ0=14;MQRankSum=2.048;QD=12.52;ReadPosRankSum=-4.716;VQSLOD=2.9741;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:23:41.29:326,41,0	1/1:11,0:11:23.94:193,24,0	0/0:21,0:11:9.16:0,9,105	0/0:31,0:17:12.04:0,12,212	1/1:14,1:14:26.94:217,27,0	0/1:22,0:22:99:195,0,126	0/1:20,0:20:67.51:130,0,68	1/1:29,0:27:78:609,78,0	1/1:6,6:12:27.06:382,27,0	0/1:20,0:19:18.33:298,0,18	0/1:26,0:26:99:250,0,104	0/1:19,0:19:87.28:87,0,118	0/1:16,0:16:53.34:53,0,213	0/1:16,0:16:59.89:165,0,60	1/1:21,0:21:53.88:474,54,0	0/1:20,0:20:67.06:248,0,67	0/1:11,0:11:57.03:57,0,117	0/1:14,0:14:64.89:79,0,65	0/1:24,1:22:29.63:314,0,30	0/1:26,0:26:76.94:264,0,77	0/1:31,0:27:99:116,0,110	0/1:23,0:23:11.24:328,0,11	0/1:29,0:29:99:179,0,185	0/1:27,0:26:99:166,0,137	1/1:9,0:9:20.73:193,21,0	1/1:16,0:16:47.97:417,48,0	1/1:21,3:23:62.32:577,62,0	1/1:4,0:4:8.97:71,9,0
chr10	19625384	.	CAA	C	7839.74	PASS	AB=0.935;AC=50;AF=0.893;AN=56;BaseQRankSum=-7.770;DP=569;FS=4.635;HRun=3;HaplotypeScore=138.7592;InbreedingCoeff=0.5409;MQ=52.15;MQ0=15;MQRankSum=-0.443;QD=15.08;ReadPosRankSum=-4.843;VQSLOD=0.2712;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:24:44.55:350,45,0	1/1:11,0:11:23.94:193,24,0	0/0:18,0:9:8.64:0,9,105	0/0:31,0:15:12.04:0,12,212	1/1:16,0:15:29.93:240,30,0	1/1:23,0:23:34.32:329,34,0	1/1:19,0:19:19.78:216,20,0	1/1:24,6:28:78.47:610,78,0	1/1:12,0:12:26.43:189,26,0	1/1:21,0:20:39.36:410,39,0	1/1:27,0:27:39.93:435,40,0	1/1:19,0:19:11.59:152,12,0	0/1:17,1:18:21.05:186,0,21	1/1:16,0:16:22.33:237,22,0	1/1:19,2:21:53.48:386,53,0	1/1:19,1:20:32.62:338,33,0	0/1:11,1:12:16.18:93,0,16	1/1:14,0:14:13.70:105,14,0	1/1:21,1:19:25.59:362,26,0	1/1:27,0:26:43.60:447,44,0	1/1:32,0:28:14.57:337,15,0	1/1:22,1:23:58.67:494,59,0	1/1:29,1:30:11.40:274,11,0	1/1:26,2:27:23.51:331,24,0	1/1:9,0:9:17.70:154,18,0	1/1:16,0:16:47.97:417,48,0	1/1:25,0:24:64.93:482,65,0	1/1:4,0:4:8.97:71,9,0
chr10	19625454	.	TA	T	4381.83	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-0.578;DP=628;FS=1.241;HRun=2;HaplotypeScore=105.8274;InbreedingCoeff=0.9967;MQ=60.82;MQ0=0;MQRankSum=0.502;QD=35.92;ReadPosRankSum=2.685;VQSLOD=4.9333;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,24:26:69.22:892,69,0	1/1:0,6:6:15.05:195,15,0	0/0:24,0:16:42.13:0,42,590	0/0:34,0:31:83.61:0,84,1132	1/1:1,26:27:75.24:968,75,0	0/0:16,0:16:48.16:0,48,716	0/0:23,0:23:66.21:0,66,965	0/0:31,0:31:93.31:0,93,1374	0/0:20,0:20:51.17:0,51,764	0/0:28,0:28:81.27:0,81,1214	0/0:34,0:34:99:0,99,1483	0/0:14,0:14:42.13:0,42,608	0/0:20,0:20:57.19:0,57,837	0/0:15,0:15:45.15:0,45,674	0/0:28,0:28:84.27:0,84,1228	0/0:31,0:31:93.30:0,93,1372	0/0:19,0:19:54.16:0,54,786	0/0:13,0:13:36.09:0,36,513	0/0:28,0:28:84.28:0,84,1239	0/0:26,0:26:78.26:0,78,1158	0/0:36,0:35:99:0,99,1437	0/0:19,0:19:54.18:0,54,809	0/0:21,0:21:60.19:0,60,876	0/0:26,0:26:75.25:0,75,1123	1/1:1,17:18:47.74:594,48,0	1/1:0,22:22:66.21:857,66,0	1/1:2,13:15:45.13:564,45,0	1/1:0,8:8:24.08:312,24,0
chr10	19625481	.	C	CA	1227.90	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-7.919;DP=665;FS=6.632;HRun=4;HaplotypeScore=96.3859;InbreedingCoeff=0.9834;MQ=64.89;MQ0=0;MQRankSum=-0.208;QD=31.48;ReadPosRankSum=-4.603;VQSLOD=1.4048;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:69.17:0,69,771	0/0:6,0:6:15.04:0,15,170	0/0:34,0:34:96.26:0,96,1078	0/0:24,0:23:47.27:0,47,570	0/0:27,0:27:78.22:0,78,885	0/0:21,0:21:60.17:0,60,680	0/0:21,0:21:54.15:0,54,612	1/1:6,33:39:99:1323,99,0	0/0:26,0:26:72.20:0,72,816	0/0:29,0:29:87.25:0,87,987	0/0:30,0:30:75.01:0,75,850	0/0:17,0:17:51.15:0,51,579	0/0:18,0:18:48.12:0,48,533	0/0:22,0:22:60.15:0,60,670	0/0:29,0:29:87.23:0,87,977	0/0:36,0:36:99:0,99,1123	0/0:20,0:20:54.15:0,54,611	0/0:17,0:17:48.12:0,48,533	0/0:25,0:25:69.18:0,69,773	0/0:26,0:26:69.19:0,69,783	0/0:36,0:36:93.26:0,93,1055	0/0:19,0:19:57.16:0,57,646	0/0:20,0:20:60.17:0,60,680	0/0:27,0:27:72.20:0,72,816	0/0:20,0:19:51.14:0,51,578	0/0:26,0:26:72.19:0,72,809	0/0:14,0:14:39.10:0,39,433	0/0:9,0:9:27.04:0,27,284
chr10	19625804	.	A	AG	24592.18	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-9.597;DP=704;FS=20.996;HRun=0;HaplotypeScore=61.5981;InbreedingCoeff=0.9993;MQ=65.69;MQ0=0;MQRankSum=-2.031;QD=38.85;ReadPosRankSum=7.993;VQSLOD=2.6641;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:1,30:31:75.17:1117,75,0	1/1:1,13:14:30.10:458,30,0	0/0:15,0:13:38.82:0,39,451	0/0:20,0:19:51.13:0,51,619	1/1:0,34:33:87.22:1301,87,0	1/1:0,33:31:84.22:1258,84,0	1/1:0,19:19:51.17:780,51,0	0/0:36,0:36:99:0,102,1340	1/1:0,27:27:78.20:1165,78,0	1/1:2,31:31:87.29:1330,87,0	1/1:0,21:21:51.09:750,51,0	1/1:0,20:20:48.11:708,48,0	1/1:0,28:27:69.23:1055,69,0	1/1:0,20:20:48.16:735,48,0	1/1:1,21:22:48.16:734,48,0	1/1:0,17:17:45.15:689,45,0	1/1:0,25:25:66.22:1000,66,0	1/1:0,34:34:90.31:1376,90,0	1/1:0,13:13:36.08:525,36,0	1/1:0,30:30:84.28:1284,84,0	1/1:1,37:38:99:1560,102,0	1/1:1,28:29:78.18:1163,78,0	1/1:0,27:27:75.25:1145,75,0	1/1:1,14:15:27.09:413,27,0	1/1:0,23:22:51.17:780,51,0	1/1:0,38:37:99:1626,111,0	1/1:0,29:28:72.24:1101,72,0	1/1:0,11:12:36.12:540,36,0
chr10	19626053	.	A	ACAACCCT	35970.37	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-6.100;DP=637;FS=1.057;HRun=0;HaplotypeScore=101.5183;InbreedingCoeff=0.9492;MQ=45.08;MQ0=1;MQRankSum=-10.884;QD=63.33;ReadPosRankSum=6.296;VQSLOD=4.8558;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,11:18:39.13:1491,39,0	1/1:2,10:13:36.12:1243,36,0	0/0:24,0:23:69.23:0,69,1608	0/0:16,0:17:51.17:0,51,1128	1/1:7,10:16:27.09:1056,27,0	1/1:8,23:29:51.18:2001,51,0	1/1:4,11:16:27.09:1037,27,0	0/0:28,0:26:72.25:0,72,1763	1/1:3,18:14:36.12:1387,36,0	1/1:12,14:20:45.15:1667,45,0	1/1:5,16:18:36.12:1324,36,0	1/1:18,15:27:54.19:2017,54,0	1/1:5,25:21:51.18:1930,51,0	1/1:4,12:17:36.12:1394,36,0	1/1:8,15:21:45.15:1668,45,0	1/1:4,28:27:66.23:2590,66,0	1/1:4,9:11:21.07:786,21,0	1/1:8,4:10:17.99:608,18,0	1/1:6,12:16:42.08:1195,42,0	1/1:13,34:42:96.33:3678,96,0	1/1:4,3:9:9.03:351,9,0	1/1:13,21:33:57.20:2034,57,0	1/1:8,18:28:48.06:1867,48,0	1/1:6,7:13:27.09:1021,27,0	1/1:3,6:7:15.05:548,15,0	1/1:7,10:17:42.13:1237,42,0	1/1:7,23:17:42.10:1552,42,0	1/1:2,9:10:9.03:287,9,0
chr10	19626616	.	CA	C	9337.82	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-1.805;DP=483;FS=7.732;HRun=9;HaplotypeScore=64.2192;InbreedingCoeff=0.9847;MQ=59.73;MQ0=3;MQRankSum=1.029;QD=21.13;ReadPosRankSum=5.167;VQSLOD=5.3672;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:2,24:26:45:412,45,0	1/1:0,9:9:24.01:220,24,0	0/0:19,1:8:21.05:0,21,231	0/0:21,0:17:40.83:0,41,406	1/1:1,18:19:39:354,39,0	1/1:4,13:17:39:357,39,0	1/1:1,10:11:30.02:275,30,0	1/1:7,30:37:90.01:815,90,0	1/1:2,11:13:33.02:302,33,0	1/1:1,19:20:54.02:494,54,0	1/1:4,15:19:45.02:412,45,0	1/1:2,11:12:30.01:274,30,0	1/1:4,13:17:45.02:408,45,0	1/1:1,12:13:24.01:220,24,0	1/1:4,8:12:24.01:220,24,0	1/1:4,18:22:54.02:494,54,0	1/1:1,12:13:33.02:302,33,0	1/1:3,14:17:42.02:384,42,0	1/1:4,10:11:27.01:247,27,0	1/1:4,16:21:45:411,45,0	1/1:2,16:18:42.02:384,42,0	1/1:2,16:19:42.02:384,42,0	1/1:2,6:8:14.98:131,15,0	1/1:1,11:12:33.02:302,33,0	1/1:1,15:16:33.02:302,33,0	1/1:1,16:16:45.02:412,45,0	1/1:2,18:20:48.01:439,48,0	1/1:4,15:19:42.02:384,42,0
chr10	19626806	.	AAAAAAC	A	408.45	PASS	AB=0.956;AC=10;AF=0.179;AN=56;BaseQRankSum=3.242;DP=434;FS=4.233;HRun=0;HaplotypeScore=85.3109;InbreedingCoeff=-0.1946;MQ=57.60;MQ0=28;MQRankSum=-0.488;QD=3.12;ReadPosRankSum=1.075;VQSLOD=1.5754;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:10:24:0,24,350	0/0:12,0:12:36.02:0,36,538	0/0:45,0:11:18.58:0,19,152	0/0:42,0:16:23.84:0,24,255	0/0:21,0:19:50.48:0,50,866	0/0:6,0:6:13.55:0,14,106	0/0:3,0:3:8.82:0,9,56	0/0:25,0:24:64.69:0,65,663	0/1:5,0:5:10.57:34,0,11	0/1:25,1:24:99:178,0,230	0/1:18,0:18:7.92:8,0,320	0/0:8,0:8:15.56:0,16,163	0/0:7,0:7:17.85:0,18,190	0/0:12,0:11:0.55:0,1,140	0/1:4,3:6:46.48:46,0,54	0/0:4,0:4:2.97:0,3,85	0/0:16,0:15:11.98:0,12,67	0/1:10,0:9:61.76:62,0,92	0/1:14,1:13:61.74:62,0,243	0/1:25,1:24:65.95:66,0,376	0/1:8,0:8:9.43:46,0,9	0/1:7,0:6:14.13:40,0,14	0/1:9,0:8:2.24:2,0,104	0/0:4,0:3:5.75:0,6,30	0/0:16,0:15:42.13:0,42,913	0/0:22,0:22:66.16:0,66,1437	0/0:24,0:24:57.10:0,57,1075	0/0:23,0:20:33.02:0,33,491
chr10	19626808	.	AAAAC	A	1144.07	PASS	AB=0.965;AC=24;AF=0.429;AN=56;BaseQRankSum=3.662;DP=392;FS=8.513;HRun=0;HaplotypeScore=64.7539;InbreedingCoeff=0.2004;MQ=58.16;MQ0=27;MQRankSum=-2.141;QD=7.48;ReadPosRankSum=4.509;VQSLOD=0.5871;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:9:20.99:0,21,234	0/0:12,0:12:36.01:0,36,388	0/0:43,0:12:8.80:0,9,137	0/0:40,0:15:18.39:0,18,171	0/0:22,0:20:47.93:0,48,495	0/1:4,0:4:8.76:30,0,9	0/1:2,0:2:6.01:12,0,6	0/0:23,0:22:57.97:0,58,458	0/1:4,0:4:1.71:49,0,2	1/1:17,0:15:0.18:268,0,0	0/1:13,2:15:26.25:127,0,26	0/1:7,0:7:2.11:2,0,2	0/0:3,0:3:3.01:0,3,39	1/1:7,0:6:1.35:23,1,0	1/1:5,0:4:3.01:38,3,0	0/1:4,1:5:7.58:61,0,8	1/1:12,0:11:1.95:18,2,0	0/1:10,0:9:13.94:66,0,14	0/1:14,1:13:40.11:144,0,40	0/1:23,0:21:73.10:213,0,73	1/1:8,0:8:9.25:74,9,0	1/1:6,0:5:11.97:98,12,0	0/1:9,0:8:34.02:38,0,34	1/1:4,0:3:8.81:52,9,0	0/0:17,0:16:45.06:0,45,618	0/0:24,0:24:72.10:0,72,1040	0/0:23,0:23:54.10:0,54,729	0/0:21,0:18:29.97:0,30,321
chr10	19626809	.	AAAC	A	1411.81	PASS	AB=0.835;AC=31;AF=0.554;AN=56;BaseQRankSum=3.301;DP=366;FS=10.985;HRun=0;HaplotypeScore=55.9974;InbreedingCoeff=0.6566;MQ=59.28;MQ0=26;MQRankSum=-1.834;QD=10.38;ReadPosRankSum=4.887;VQSLOD=1.1847;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:9:20.97:0,21,195	0/0:12,0:12:35.97:0,36,329	0/0:40,0:12:21.48:0,21,168	0/0:38,0:15:21.29:0,21,181	0/0:21,0:19:41.48:0,41,372	1/1:0,3:3:6.02:79,6,0	1/1:2,0:2:3.83:20,4,0	0/0:23,0:22:59.16:0,59,455	1/1:4,0:4:9.35:62,9,0	1/1:16,0:14:20.52:285,21,0	1/1:12,0:12:6.33:142,6,0	1/1:4,0:4:5.75:32,6,0	0/0:1,0:1:3.01:0,3,31	1/1:5,0:4:5.07:41,5,0	1/1:5,0:4:5.80:44,6,0	1/1:4,0:4:8.76:73,9,0	1/1:5,7:11:2.44:39,2,0	1/1:9,0:8:12.24:88,12,0	0/1:13,0:11:4.94:143,0,5	0/1:17,2:17:3.50:250,0,3	1/1:9,0:9:13.49:102,13,0	1/1:6,0:5:11.97:98,12,0	0/1:3,6:8:5.38:61,0,5	1/1:4,0:3:8.81:52,9,0	0/0:17,0:16:43.74:0,44,463	0/0:24,0:24:70.91:0,71,851	0/0:23,0:23:53.99:0,54,592	0/0:19,0:16:26.88:0,27,246
chr10	19627336	.	T	TTGTGTGTG	3163.81	PASS	AC=34;AF=0.739;AN=46;BaseQRankSum=-4.098;DP=562;FS=14.850;HRun=0;HaplotypeScore=179.7018;InbreedingCoeff=0.6340;MQ=65.06;MQ0=13;MQRankSum=-0.282;QD=8.96;ReadPosRankSum=0.125;VQSLOD=1.9383;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:27:20.67:0,21,336	0/0:10,0:11:12.02:0,12,226	./.	./.	0/0:18,0:18:6.33:0,6,101	1/1:19,0:29:4.71:132,5,0	1/1:17,0:17:3.01:45,3,0	./.	1/1:23,2:25:6.49:215,6,0	1/1:27,0:27:19.55:450,20,0	1/1:11,0:9:0.47:1,0,0	1/1:23,0:23:18.06:379,18,0	1/1:22,0:21:10.70:252,11,0	1/1:7,0:11:3.01:64,3,0	1/1:24,0:24:9.50:126,10,0	1/1:12,5:18:6.02:243,6,0	1/1:15,0:15:12.01:271,12,0	./.	1/1:18,0:16:11.31:128,11,0	1/1:26,0:26:7.72:219,8,0	1/1:24,0:21:4.13:101,4,0	1/1:12,4:15:3.48:122,3,0	1/1:22,0:22:11.59:453,12,0	1/1:17,4:24:0.74:118,1,0	0/0:5,0:11:13.29:0,13,222	0/0:21,0:21:9.03:0,9,142	0/0:22,0:20:9.03:0,9,175	./.
chr10	19627598	.	C	CAAA	1417.35	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-3.643;DP=563;FS=0.000;HRun=8;HaplotypeScore=82.4693;InbreedingCoeff=0.9098;MQ=66.72;MQ0=0;MQRankSum=-0.595;QD=30.16;ReadPosRankSum=-0.973;VQSLOD=1.9459;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:23.81:0,24,231	0/0:9,0:9:24.06:0,24,315	0/0:25,0:25:4.09:0,4,339	0/0:17,0:16:11.45:0,11,219	0/0:29,0:30:82.69:0,83,1043	0/0:36,0:36:99:0,99,1261	0/0:19,0:19:51.05:0,51,619	0/0:22,0:22:42:0,42,483	1/1:2,12:16:30.08:568,30,0	0/0:27,0:27:45.55:0,46,803	0/0:10,0:10:30.07:0,30,365	0/0:14,0:14:37.90:0,38,461	0/0:29,0:29:81.14:0,81,970	0/0:18,0:18:51.11:0,51,623	1/1:5,22:31:51.17:970,51,0	0/0:16,0:16:39.08:0,39,483	0/0:18,0:18:45.06:0,45,554	0/0:15,0:15:41.79:0,42,481	0/0:15,0:15:45.09:0,45,521	0/0:26,0:26:38.54:0,39,717	0/0:24,0:24:63.12:0,63,779	0/0:16,0:16:38.92:0,39,452	0/0:19,0:19:48.11:0,48,615	0/0:11,0:11:24.05:0,24,300	0/0:16,0:16:48.14:0,48,616	0/0:32,0:32:92.83:0,93,1138	0/0:23,0:23:60.10:0,60,738	0/0:14,0:15:34.30:0,34,406
chr10	19627772	.	CT	C	17908.89	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=8.375;DP=571;FS=2.169;HRun=2;HaplotypeScore=90.2419;InbreedingCoeff=0.9918;MQ=61.95;MQ0=0;MQRankSum=0.060;QD=35.75;ReadPosRankSum=1.065;VQSLOD=5.2600;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,28:29:78.23:996,78,0	1/1:0,10:10:30.10:388,30,0	0/0:16,0:15:41.96:0,42,535	0/0:6,0:6:15.05:0,15,223	1/1:0,25:25:72.23:935,72,0	1/1:1,22:23:63.20:818,63,0	1/1:0,21:21:63.20:818,63,0	1/1:1,34:35:99:1308,102,0	0/0:19,0:19:57.18:0,57,833	1/1:0,30:30:90.26:1140,90,0	1/1:0,28:28:78.25:1013,78,0	1/1:0,16:16:45.15:584,45,0	1/1:0,12:12:33.11:429,33,0	1/1:0,7:7:18.06:234,18,0	0/0:29,0:29:87.29:0,87,1286	1/1:0,15:15:39.13:506,39,0	1/1:1,20:21:35.20:679,35,0	1/1:3,23:26:34.90:822,35,0	1/1:0,17:17:51.14:633,51,0	1/1:1,28:29:75.24:973,75,0	1/1:1,7:8:21.07:273,21,0	1/1:0,16:16:48.16:623,48,0	1/1:0,32:32:84.27:1091,84,0	1/1:0,15:15:39.13:506,39,0	1/1:0,19:19:54.18:701,54,0	1/1:0,21:21:63.19:803,63,0	1/1:1,30:31:84.27:1091,84,0	1/1:1,14:15:42.14:545,42,0
chr10	19628831	.	T	TA	6908.06	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=-12.478;DP=525;FS=0.360;HRun=10;HaplotypeScore=52.4752;InbreedingCoeff=0.9611;MQ=58.80;MQ0=3;MQRankSum=0.132;QD=22.50;ReadPosRankSum=2.025;VQSLOD=5.6267;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:43:0,43,399	0/0:5,0:5:5.96:0,6,49	0/0:9,0:4:11.97:0,12,96	0/0:20,0:9:23.96:0,24,197	0/0:22,0:23:55.96:0,56,447	1/1:2,19:22:44.41:588,44,0	1/1:1,10:11:27.07:288,27,0	0/0:29,0:29:65.86:0,66,536	0/0:0,0:17:28.52:0,29,82	1/1:3,20:23:60.08:607,60,0	1/1:7,18:25:39.02:391,39,0	1/1:2,13:15:27.26:401,27,0	1/1:7,13:20:9.59:375,10,0	1/1:3,15:18:20.48:423,20,0	0/0:16,0:16:41.95:0,42,345	1/1:3,10:14:23.22:282,23,0	1/1:4,18:22:38.27:425,38,0	1/1:6,14:19:8.46:295,8,0	1/1:3,18:20:32.48:541,32,0	1/1:5,29:34:84.51:874,85,0	1/1:2,13:15:27.07:288,27,0	1/1:3,14:17:17.46:362,17,0	1/1:1,15:16:32.95:352,33,0	1/1:1,13:14:39.10:416,39,0	0/0:18,0:18:47.82:0,48,382	0/0:28,0:28:77.90:0,78,639	0/0:25,0:25:63.79:0,64,519	0/0:8,0:8:23.87:0,24,182
chr10	19634280	.	T	TA	3085.70	PASS	AB=0.757;AC=31;AF=0.554;AN=56;BaseQRankSum=-9.998;DP=577;FS=0.428;HRun=14;HaplotypeScore=84.0770;InbreedingCoeff=0.4624;MQ=72.70;MQ0=1;MQRankSum=1.728;QD=8.52;ReadPosRankSum=-4.053;VQSLOD=1.8982;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:41:50.84:0,51,146	0/0:2,0:8:8.13:0,8,23	0/1:11,0:8:6.67:7,0,13	0/0:13,1:13:5.28:0,5,31	0/0:11,0:34:30.30:0,30,88	1/1:3,10:13:12:105,12,0	1/1:8,14:22:2.97:142,3,0	1/1:14,14:27:40.39:355,40,0	1/1:6,10:16:20.79:165,21,0	1/1:11,16:28:3.20:239,3,0	1/1:5,11:16:25.30:196,25,0	0/1:18,0:18:30.95:105,0,31	1/1:3,13:17:15:132,15,0	0/1:7,7:14:11.59:150,0,12	0/0:5,0:27:31:0,31,88	1/1:2,9:11:12.88:105,13,0	1/1:11,25:37:65.66:565,66,0	1/1:5,6:11:15.47:132,15,0	0/1:13,4:18:10.12:145,0,10	1/1:6,13:19:20.96:176,21,0	0/1:6,11:17:10.29:39,0,10	1/1:6,11:19:26.79:215,27,0	0/1:8,8:17:29.93:119,0,30	0/1:9,20:29:3.02:192,0,3	0/0:3,0:23:28.48:0,28,82	0/0:11,0:24:29.09:0,29,95	0/0:5,0:24:38.67:0,39,111	0/0:8,0:19:20.27:0,20,59
chr10	19634496	.	CA	C	7267.20	PASS	AB=0.900;AC=35;AF=0.625;AN=56;BaseQRankSum=10.463;DP=656;FS=8.921;HRun=12;HaplotypeScore=124.6883;InbreedingCoeff=0.8998;MQ=68.98;MQ0=1;MQRankSum=-0.308;QD=18.59;ReadPosRankSum=2.491;VQSLOD=4.4100;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:37:86.26:0,86,512	0/0:3,0:13:28.41:0,28,143	0/0:29,0:20:1.24:0,1,155	0/0:14,1:8:5.99:0,6,50	0/0:5,1:29:45.62:0,46,335	1/1:4,23:27:68.71:534,69,0	1/1:2,11:13:32.82:255,33,0	0/0:13,0:32:58.55:0,59,356	0/0:6,0:21:37.14:0,37,222	1/1:4,28:32:80.50:620,81,0	1/1:3,17:20:44.75:344,45,0	1/1:5,15:20:41.76:325,42,0	1/1:3,16:19:44.75:348,45,0	1/1:1,18:19:47.77:371,48,0	1/1:2,21:23:62.73:487,63,0	1/1:2,16:18:44.79:348,45,0	1/1:6,26:32:74.57:580,75,0	1/1:2,10:13:32.85:254,33,0	1/1:8,19:27:56.60:440,57,0	1/1:2,26:28:77.62:599,78,0	1/1:3,15:18:44.80:348,45,0	1/1:2,24:26:68.70:534,69,0	1/1:4,21:25:56.67:441,57,0	1/1:3,19:22:56.70:437,57,0	0/0:1,0:20:42.20:0,42,207	0/0:12,1:37:47.44:0,47,421	0/0:10,0:31:60.04:0,60,339	0/1:1,1:8:3.16:3,0,78
chr10	19634954	.	A	AT	11273.19	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-9.283;DP=408;FS=14.042;HRun=0;HaplotypeScore=33.6281;InbreedingCoeff=0.9526;MQ=71.80;MQ0=0;MQRankSum=-2.857;QD=33.55;ReadPosRankSum=6.225;VQSLOD=3.0193;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,28:28:66.22:918,66,0	1/1:1,3:4:9.03:126,9,0	0/0:11,0:10:26.95:0,27,333	0/0:7,0:6:8:0,8,125	1/1:0,9:9:26.95:322,27,0	1/1:0,21:21:48.16:668,48,0	1/1:1,9:11:15.03:190,15,0	0/0:41,0:40:99:0,114,1399	0/0:13,0:13:39.02:0,39,479	1/1:0,9:9:27.06:344,27,0	1/1:1,10:11:27:344,27,0	1/1:1,7:8:18.05:251,18,0	1/1:0,12:12:30.10:418,30,0	1/1:1,15:16:36.11:487,36,0	1/1:0,16:16:39.13:544,39,0	1/1:1,17:18:36.08:502,36,0	1/1:0,16:16:36.12:502,36,0	1/1:0,13:13:30.10:418,30,0	1/1:1,19:20:57.15:730,57,0	1/1:2,16:18:42.02:532,42,0	1/1:0,11:11:33.11:460,33,0	1/1:0,10:10:29.95:370,30,0	1/1:0,10:10:30.10:419,30,0	1/1:0,7:7:18.06:251,18,0	1/1:0,17:17:42.14:586,42,0	1/1:0,24:25:75.06:928,75,0	1/1:0,16:16:45.15:627,45,0	1/1:0,10:10:24.08:334,24,0
chr10	19635420	.	TGGAGAGACAGCTCAGC	T	22273.67	PASS	AB=0.567;AC=47;AF=0.839;AN=56;BaseQRankSum=11.443;DP=371;FS=10.609;HRun=0;HaplotypeScore=213.0617;InbreedingCoeff=0.7418;MQ=79.28;MQ0=0;MQRankSum=-12.986;QD=80.70;ReadPosRankSum=7.431;VQSLOD=2.9062;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,9:18:12.04:575,12,0	1/1:1,4:5:9.03:431,9,0	0/0:20,0:20:57.20:0,57,3402	0/0:23,0:24:69.24:0,69,4068	1/1:5,6:11:21.07:896,21,0	1/1:3,10:13:24.08:1125,24,0	1/1:2,8:10:21.07:958,21,0	0/0:31,0:31:81.25:0,81,4713	0/0:20,0:20:60.20:0,60,4296	1/1:7,4:11:9.03:431,9,0	1/1:13,4:17:21.36:685,21,0	1/1:3,8:11:24.08:1150,24,0	1/1:0,14:14:42.14:2012,42,0	1/1:2,12:15:36.12:1718,36,0	1/1:4,15:19:45.15:2080,45,0	0/1:4,13:17:99:1823,0,435	1/1:4,5:9:9.03:431,9,0	1/1:3,8:11:24.08:1150,24,0	1/1:0,6:6:12.04:479,12,0	1/1:5,7:12:12.04:495,12,0	1/1:6,6:12:12.93:458,13,0	1/1:0,4:4:9.03:431,9,0	1/1:6,2:8:6.02:287,6,0	1/1:2,3:5:6.02:287,6,0	1/1:6,11:17:27.09:1191,27,0	1/1:4,7:11:14.96:592,15,0	1/1:0,12:12:33.11:1581,33,0	1/1:1,7:8:21.07:1006,21,0
chr10	19635422	.	GAGAGACAGCTCAGCGT	G	19407.46	PASS	AB=1.000;AC=47;AF=0.839;AN=56;BaseQRankSum=11.686;DP=288;FS=10.810;HRun=0;HaplotypeScore=182.2056;InbreedingCoeff=0.7138;MQ=86.61;MQ0=0;MQRankSum=-12.884;QD=98.52;ReadPosRankSum=7.333;VQSLOD=3.4349;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,0:9:12.04:497,12,0	1/1:4,0:4:9.03:376,9,0	0/0:19,0:19:57.20:0,57,3333	0/0:24,0:24:69.24:0,69,3930	1/1:6,2:8:4.10:797,4,0	1/1:10,0:10:24.08:964,24,0	1/1:8,0:8:21.07:825,21,0	0/0:28,0:28:72.25:0,72,4507	0/0:20,0:20:57.20:0,57,4301	1/1:4,0:4:9.03:385,9,0	1/1:7,1:8:21.04:633,21,0	1/1:8,0:8:24.08:1007,24,0	1/1:14,0:14:42.14:1757,42,0	1/1:13,0:13:36.12:1493,36,0	1/1:15,0:15:45.15:1802,45,0	0/1:15,0:15:99:1578,0,441	1/1:5,0:5:9.03:375,9,0	1/1:8,0:8:24.08:984,24,0	1/1:6,0:6:12.02:397,12,0	1/1:7,1:8:12.04:448,12,0	1/1:6,0:6:12.04:382,12,0	1/1:4,0:4:9.03:378,9,0	1/1:2,0:2:6.02:255,6,0	1/1:3,0:3:6.02:250,6,0	1/1:11,2:13:27.09:1076,27,0	1/1:7,0:7:15.03:518,15,0	1/1:12,0:12:33.11:1370,33,0	1/1:7,0:7:21.07:860,21,0
chr10	19636658	.	GCCCAACC	G	25327.26	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=14.121;DP=485;FS=1.920;HRun=0;HaplotypeScore=218.9602;InbreedingCoeff=0.9592;MQ=83.03;MQ0=0;MQRankSum=-14.621;QD=66.65;ReadPosRankSum=7.297;VQSLOD=4.7770;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,20:20:48.16:1321,48,0	1/1:0,9:9:17.93:424,18,0	0/0:21,0:21:47.68:0,48,2018	0/0:27,0:27:74.20:0,74,2707	1/1:0,21:21:42.13:961,42,0	1/1:0,19:19:57.20:1577,57,0	1/1:0,11:11:33.11:919,33,0	0/0:33,0:33:99:0,99,4053	0/0:24,0:24:72.25:0,72,2976	1/1:0,23:23:66.70:1823,67,0	1/1:0,20:20:33.11:867,33,0	1/1:0,19:19:57.20:1585,57,0	1/1:0,8:8:24.08:665,24,0	1/1:0,15:15:36.12:1002,36,0	1/1:0,9:9:27.09:748,27,0	1/1:0,18:18:42.14:1159,42,0	1/1:0,15:15:36.59:982,37,0	1/1:1,16:17:39.13:1074,39,0	1/1:0,10:10:30.10:837,30,0	1/1:0,23:23:48.08:1182,48,0	1/1:0,9:9:6.02:161,6,0	1/1:0,12:12:30.10:829,30,0	1/1:0,16:16:36.12:996,36,0	1/1:0,13:13:24.08:668,24,0	1/1:1,18:19:54.19:1484,54,0	1/1:0,22:22:63.19:1658,63,0	1/1:0,27:27:75.26:2070,75,0	1/1:0,5:5:12.04:335,12,0
chr10	19637162	.	G	GAC	37328.80	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=2.085;DP=1261;FS=1.467;HRun=0;HaplotypeScore=184.4476;InbreedingCoeff=1.0000;MQ=59.47;MQ0=6;MQRankSum=5.478;QD=35.69;ReadPosRankSum=10.372;VQSLOD=5.0661;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,44:53:82.22:1499,82,0	1/1:1,25:25:51.17:883,51,0	0/0:60,0:37:85.62:0,86,1049	0/0:58,0:38:80.22:0,80,924	1/1:2,33:36:78.26:1351,78,0	1/1:3,33:36:87.30:1506,87,0	1/1:2,34:36:62.84:1069,63,0	0/0:48,0:49:99:0,110,1413	0/0:48,0:48:99:0,129,1667	1/1:8,68:76:99:3350,205,0	1/1:0,24:24:54.18:935,54,0	1/1:7,51:58:99:1979,111,0	1/1:6,61:67:99:2389,138,0	1/1:6,47:54:99:1714,99,0	1/1:2,65:70:99:2909,169,0	1/1:8,43:51:50.36:1467,50,0	1/1:9,24:34:37.51:770,38,0	1/1:6,34:41:70.13:1335,70,0	1/1:4,13:17:45.14:727,45,0	1/1:2,38:41:93.32:1610,93,0	1/1:11,70:81:99:3065,178,0	1/1:1,33:35:63.22:1091,63,0	1/1:2,27:30:63.22:1091,63,0	1/1:1,33:34:46.67:1071,47,0	1/1:8,30:40:81.28:1400,81,0	1/1:5,41:46:99:2094,123,0	1/1:2,30:34:72.25:1246,72,0	1/1:1,24:25:44.98:779,45,0
chr10	19637525	.	TGA	T	2176.87	PASS	AB=1.000;AC=43;AF=0.827;AN=52;BaseQRankSum=-1.131;DP=534;FS=19.808;HRun=0;HaplotypeScore=110.7370;InbreedingCoeff=0.6265;MQ=63.91;MQ0=10;MQRankSum=0.812;QD=5.50;ReadPosRankSum=2.500;VQSLOD=1.7587;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:19,0:18:2.74:3,0,9	1/1:3,0:3:0.47:1,0,0	./.	0/0:38,0:7:0:0,0,0	1/1:13,0:23:8.50:42,9,0	1/1:14,4:20:6:65,6,0	0/0:11,0:15:20.33:0,20,214	0/0:28,0:28:22.09:0,22,167	1/1:10,0:19:10.91:55,11,0	1/1:23,8:31:21.03:217,21,0	1/1:14,1:13:2.80:13,3,0	1/1:4,4:8:6.02:65,6,0	1/1:13,2:14:15:145,15,0	1/1:9,4:14:8.68:61,9,0	0/0:19,0:17:16.34:0,16,100	1/1:15,1:18:23.70:207,24,0	1/1:20,7:27:16.52:284,17,0	1/1:7,4:11:11.99:116,12,0	./.	1/1:18,0:18:9.01:90,9,0	1/1:7,9:16:12.03:131,12,0	1/1:14,2:17:14.87:145,15,0	1/1:20,7:27:12.03:131,12,0	1/1:10,10:20:27.07:295,27,0	1/1:10,0:17:4.90:54,5,0	1/1:22,0:27:20.70:119,21,0	1/1:11,0:19:11.36:56,11,0	1/1:9,0:12:5.68:28,6,0
chr10	19637979	.	CAT	C	1079.43	PASS	AB=0.969;AC=24;AF=0.429;AN=56;BaseQRankSum=-1.550;DP=801;FS=49.398;HRun=0;HaplotypeScore=192.2230;InbreedingCoeff=-0.5710;MQ=42.19;MQ0=36;MQRankSum=2.149;QD=1.63;ReadPosRankSum=-3.290;VQSLOD=0.6031;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:44,1:43:92.73:93,0,209	0/1:15,0:14:88.46:88,0,101	0/0:20,0:3:5.96:0,6,43	0/0:31,0:3:2.99:0,3,24	0/1:26,0:24:79.72:80,0,139	0/1:16,0:15:5.24:5,0,131	0/1:44,1:41:0.94:1,0,406	0/0:33,0:27:38.73:0,39,436	0/0:27,0:26:32.99:0,33,293	0/1:32,1:28:49.04:49,0,433	0/1:21,1:21:42.87:61,0,43	0/1:28,1:29:99:104,0,171	0/1:21,3:24:14.63:15,0,239	0/1:43,1:44:7.43:7,0,341	1/1:25,1:22:20.52:158,21,0	0/1:14,1:15:49.33:49,0,74	0/0:27,0:27:8.76:0,9,285	0/1:26,1:26:50.41:50,0,233	0/1:25,1:22:98.48:98,0,169	0/1:27,0:27:98.51:106,0,99	0/1:54,1:49:20.18:20,0,142	0/1:21,0:19:2.35:2,0,136	0/1:25,0:24:31.24:31,0,124	0/1:38,1:39:59.21:59,0,261	0/1:27,2:28:20.12:20,0,233	0/1:30,1:31:92.88:93,0,348	0/1:19,2:20:21.08:21,0,198	0/1:21,1:21:21.10:21,0,354
chr10	19637995	.	CAT	C	3124.60	PASS	AB=0.991;AC=43;AF=0.768;AN=56;BaseQRankSum=2.669;DP=736;FS=0.495;HRun=0;HaplotypeScore=176.0687;InbreedingCoeff=0.2589;MQ=39.81;MQ0=30;MQRankSum=3.552;QD=4.78;ReadPosRankSum=6.542;VQSLOD=2.3936;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:38,0:37:16.32:145,16,0	1/1:11,0:11:8.49:47,8,0	0/0:33,0:4:12.03:0,12,153	0/1:47,1:9:13.84:14,0,231	0/1:21,1:21:38.81:67,0,39	0/1:15,0:14:1.72:61,0,2	1/1:42,1:39:10.88:209,11,0	0/0:30,0:26:25.22:0,25,801	0/0:20,0:19:33.11:0,33,623	1/1:27,0:22:26.72:313,27,0	1/1:15,0:14:14.77:103,15,0	1/1:30,0:30:12.61:130,13,0	1/1:21,1:22:7.18:149,7,0	1/1:37,1:38:48.17:266,48,0	1/1:22,0:18:11.28:61,11,0	1/1:13,0:13:8.40:48,8,0	1/1:26,0:26:3.81:168,4,0	1/1:25,0:24:20.56:187,21,0	0/1:20,0:17:50.13:82,0,50	1/1:21,0:21:15.67:80,16,0	1/1:50,0:43:21.65:120,22,0	1/1:21,0:19:17.22:99,17,0	1/1:20,0:20:23.02:142,23,0	1/1:28,0:28:7.98:149,8,0	1/1:29,0:28:22.29:157,22,0	0/1:27,0:27:30.76:217,0,31	0/1:19,0:19:29.14:103,0,29	0/1:23,0:22:7.09:176,0,7
chr10	19637997	.	TAC	T	6389.51	PASS	AB=0.689;AC=41;AF=0.732;AN=56;BaseQRankSum=-1.591;DP=738;FS=30.772;HRun=0;HaplotypeScore=170.8847;InbreedingCoeff=0.2869;MQ=39.56;MQ0=31;MQRankSum=2.321;QD=10.68;ReadPosRankSum=9.338;VQSLOD=2.5407;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,24:38:29.61:382,30,0	0/1:5,6:11:13.40:102,0,13	0/0:36,0:5:11.97:0,12,159	0/0:49,0:9:14.20:0,14,311	0/1:18,5:23:19.36:135,0,19	1/1:6,9:14:12.01:153,12,0	1/1:12,28:37:18.65:539,19,0	0/0:33,0:29:56.53:0,57,835	0/0:22,0:21:28.28:0,28,528	1/1:14,14:23:2.50:446,2,0	1/1:9,7:15:3.01:38,3,0	0/1:18,10:28:13.72:100,0,14	0/1:11,10:21:18.65:274,0,19	1/1:14,22:36:14.36:433,14,0	1/1:11,9:18:12.42:154,12,0	1/1:7,5:12:5.89:75,6,0	1/1:6,21:27:33.09:415,33,0	1/1:11,12:22:9.73:289,10,0	1/1:14,4:15:8.26:147,8,0	1/1:9,13:22:9.94:184,10,0	1/1:31,20:44:22.84:303,23,0	0/1:13,7:18:9:103,0,9	1/1:5,14:19:18.06:229,18,0	1/1:8,19:27:27.09:343,27,0	1/1:11,18:28:24.52:408,25,0	0/1:10,17:27:7.34:513,0,7	1/1:13,6:20:22.87:262,23,0	0/1:8,14:22:26.30:362,0,26
chr10	19638009	.	CAT	C	2774.53	PASS	AB=1.000;AC=45;AF=0.804;AN=56;BaseQRankSum=4.660;DP=724;FS=0.000;HRun=0;HaplotypeScore=194.2596;InbreedingCoeff=0.5582;MQ=40.09;MQ0=24;MQRankSum=3.176;QD=4.95;ReadPosRankSum=8.398;VQSLOD=2.0390;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:38,2:39:29.69:163,30,0	1/1:10,0:10:10.10:48,10,0	0/0:45,0:6:8.20:0,8,190	0/0:67,0:14:17.07:0,17,433	1/1:20,1:20:13.51:77,14,0	1/1:14,0:13:12.48:76,12,0	1/1:35,0:33:40.76:206,41,0	0/0:28,0:28:80.67:0,81,1222	0/0:23,0:22:37.01:0,37,621	1/1:25,0:21:44:256,44,0	1/1:17,0:16:2.75:14,3,0	1/1:26,0:26:11.72:69,12,0	1/1:20,0:20:22.08:164,22,0	1/1:32,0:32:35.82:201,36,0	1/1:24,0:22:10.97:62,11,0	1/1:15,0:15:8.11:40,8,0	1/1:24,0:24:31.76:182,32,0	0/1:21,0:20:9.48:100,0,9	0/1:13,0:12:44.44:44,0,79	1/1:25,0:25:17.03:91,17,0	1/1:45,0:41:5.87:107,6,0	0/1:22,0:20:17.30:26,0,17	1/1:15,1:16:17.42:86,17,0	1/1:26,1:27:23.14:149,23,0	1/1:28,0:27:13.29:141,13,0	1/1:24,0:24:45.54:249,46,0	1/1:14,0:14:26.47:174,26,0	1/1:23,0:22:19.57:220,20,0
chr10	19638014	.	ACG	A	887.97	PASS	AB=0.853;AC=17;AF=0.304;AN=56;BaseQRankSum=5.163;DP=710;FS=8.034;HRun=0;HaplotypeScore=196.9374;InbreedingCoeff=-0.4517;MQ=40.65;MQ0=20;MQRankSum=0.407;QD=2.24;ReadPosRankSum=-7.238;VQSLOD=-0.6844;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:36,3:38:33.79:34,0,278	0/0:7,2:9:4.68:0,5,68	0/0:45,0:6:15.05:0,15,240	0/0:67,0:14:40.73:0,41,513	0/1:12,9:20:67.21:67,0,103	0/1:12,1:13:51.78:52,0,112	0/1:33,3:34:84.63:85,0,479	0/0:33,0:33:83.23:0,83,1489	0/0:21,0:20:37:0,37,565	0/1:20,1:19:89.21:89,0,204	0/0:8,11:19:2.86:0,3,29	0/1:14,9:23:74.75:75,0,83	0/0:17,4:21:6.39:0,6,123	0/1:25,5:30:1:1,0,329	0/1:17,6:21:73.89:74,0,98	0/1:5,10:15:30.85:39,0,31	0/0:22,1:23:31.40:0,31,274	0/0:20,1:20:28.20:0,28,352	0/1:10,1:10:18.76:19,0,285	0/0:17,9:26:15:0,15,168	0/1:40,2:39:64.35:64,0,223	0/1:10,9:18:73.66:74,0,148	0/1:15,1:16:24.84:25,0,178	0/1:25,2:27:88.32:88,0,176	0/0:24,5:28:13.33:0,13,367	0/1:22,2:24:94.22:94,0,339	0/1:12,3:15:34.45:124,0,34	0/1:19,2:21:38.35:38,0,208
chr10	19638996	.	CCACA	C	1440.69	PASS	AB=0.887;AC=17;AF=0.340;AN=50;BaseQRankSum=3.253;DP=537;FS=11.291;HRun=0;HaplotypeScore=107.5807;InbreedingCoeff=0.3157;MQ=69.72;MQ0=15;MQRankSum=-1.473;QD=6.52;ReadPosRankSum=0.693;VQSLOD=1.7991;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:18,5:26:11.57:282,12,0	1/1:7,3:11:15.05:226,15,0	./.	./.	1/1:10,1:13:2.74:39,3,0	0/0:18,0:18:26.67:0,27,429	0/1:26,0:27:1.42:1,0,358	./.	0/0:4,0:14:6.02:0,6,112	0/1:11,0:12:45.08:45,0,251	0/1:12,0:13:41.73:42,0,70	0/0:18,0:19:17.57:0,18,258	0/0:13,0:14:23.95:0,24,364	0/0:10,0:11:20.09:0,20,409	0/0:18,0:20:23.20:0,23,315	0/0:15,0:17:21.01:0,21,331	0/0:14,0:14:24.05:0,24,396	0/0:18,0:19:32.58:0,33,559	0/1:10,1:11:37.53:38,0,131	0/0:11,0:12:20.81:0,21,393	0/0:33,0:31:44.35:0,44,766	0/0:13,0:15:11.51:0,12,165	0/0:10,0:11:11.36:0,11,320	0/1:32,2:34:57.30:57,0,589	0/1:8,3:14:49.92:202,0,50	0/1:21,3:24:25.90:219,0,26	1/1:20,4:28:17.57:342,18,0	1/1:4,0:5:9.02:115,9,0
chr10	19639046	.	TTG	T	12318.95	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-1.891;DP=671;FS=5.030;HRun=0;HaplotypeScore=105.5573;InbreedingCoeff=0.9209;MQ=53.28;MQ0=22;MQRankSum=2.302;QD=21.84;ReadPosRankSum=1.364;VQSLOD=5.4622;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:10,18:28:47.74:498,48,0	1/1:3,6:9:12.04:146,12,0	0/0:41,0:7:8.99:0,9,112	0/0:53,0:7:7.38:0,7,87	1/1:9,23:32:63.11:731,63,0	1/1:6,15:20:33.10:400,33,0	1/1:10,27:39:72.01:869,72,0	1/1:14,9:22:24.07:291,24,0	0/0:13,0:13:12.04:0,12,192	1/1:10,11:21:32.99:380,33,0	1/1:6,16:22:54.16:653,54,0	1/1:6,19:25:45.14:544,45,0	1/1:5,13:18:38.91:473,39,0	1/1:4,14:19:44.76:521,45,0	1/1:4,13:17:36.11:437,36,0	1/1:4,14:18:36.11:437,36,0	1/1:8,19:27:54.16:652,54,0	1/1:6,8:14:20.33:254,20,0	1/1:11,4:16:20.79:217,21,0	1/1:8,15:23:48.10:561,48,0	1/1:10,25:32:51.16:619,51,0	1/1:6,14:20:42.13:507,42,0	1/1:5,12:16:36.11:430,36,0	1/1:9,25:34:56.72:642,57,0	1/1:6,19:24:50.83:613,51,0	1/1:6,15:21:45.13:535,45,0	1/1:7,17:24:33.10:400,33,0	1/1:1,14:15:42.13:510,42,0
chr10	19639723	.	G	GAGAGAA	8211.50	PASS	AB=0.890;AC=46;AF=0.821;AN=56;BaseQRankSum=-4.061;DP=556;FS=0.534;HRun=0;HaplotypeScore=142.7047;InbreedingCoeff=0.5077;MQ=72.11;MQ0=12;MQRankSum=0.799;QD=17.89;ReadPosRankSum=4.985;VQSLOD=4.1814;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:32:22.62:434,0,23	0/1:7,0:7:6.93:144,0,7	0/0:27,0:17:19.88:0,20,157	0/0:56,0:25:32.56:0,33,312	1/1:22,0:22:37.87:300,38,0	1/1:16,0:15:29.03:441,29,0	1/1:22,0:21:46.82:402,47,0	1/1:20,0:19:35.84:344,36,0	0/0:14,0:14:32.78:0,33,290	1/1:18,0:18:32.43:334,32,0	1/1:9,0:9:18.01:164,18,0	1/1:24,0:24:62.32:724,62,0	1/1:17,0:17:36.42:322,36,0	1/1:14,0:13:29.96:369,30,0	0/1:24,0:24:30.84:340,0,31	1/1:19,0:18:34.63:313,35,0	0/1:5,18:23:23.61:174,0,24	1/1:14,0:13:12.57:254,13,0	1/1:20,0:20:13.86:330,14,0	1/1:15,0:15:33.42:309,33,0	1/1:23,0:23:47.99:536,48,0	1/1:14,0:14:12.79:154,13,0	1/1:14,0:14:21.61:166,22,0	1/1:26,0:25:30.10:731,30,0	1/1:13,0:13:20.89:147,21,0	1/1:25,0:25:19.12:378,19,0	1/1:20,0:20:36.33:285,36,0	1/1:7,0:6:14.95:119,15,0
chr10	19640591	.	AAAAC	A	14947.62	PASS	AB=0.590;AC=45;AF=0.804;AN=56;BaseQRankSum=4.572;DP=646;FS=0.550;HRun=0;HaplotypeScore=110.8072;InbreedingCoeff=0.8934;MQ=65.83;MQ0=8;MQRankSum=0.144;QD=27.89;ReadPosRankSum=4.447;VQSLOD=4.8010;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,22:32:51.17:833,51,0	1/1:0,5:5:15.05:245,15,0	0/0:24,0:19:20.28:0,20,382	0/0:18,0:16:18.94:0,19,372	1/1:7,21:28:63.18:988,63,0	1/1:4,16:19:39.13:625,39,0	1/1:8,10:18:27.09:429,27,0	0/0:26,0:26:39.13:0,39,899	0/0:23,0:23:48.16:0,48,1082	1/1:4,18:21:51.16:807,51,0	1/1:6,14:20:42.05:596,42,0	1/1:4,21:25:51.17:833,51,0	1/1:9,22:31:45.15:735,45,0	1/1:6,9:15:18.06:294,18,0	0/0:4,0:19:27.09:0,27,472	1/1:2,9:11:12.04:196,12,0	1/1:14,27:40:62.70:974,63,0	0/1:7,16:22:4.79:411,0,5	1/1:3,5:8:15.03:220,15,0	1/1:11,19:30:51.10:715,51,0	1/1:6,11:17:18.06:294,18,0	1/1:5,22:27:60.16:951,60,0	1/1:9,15:24:45.07:703,45,0	1/1:13,26:39:57.19:931,57,0	1/1:4,19:22:48.16:771,48,0	1/1:16,23:39:75.24:1173,75,0	1/1:5,21:26:54.18:882,54,0	1/1:1,11:11:21.07:343,21,0
chr10	19641412	.	TAC	T	116.70	PASS	AB=1.000;AC=3;AF=0.058;AN=52;BaseQRankSum=-3.441;DP=402;FS=4.021;HRun=0;HaplotypeScore=111.7583;InbreedingCoeff=0.3657;MQ=54.21;MQ0=9;MQRankSum=3.355;QD=4.17;ReadPosRankSum=2.679;VQSLOD=2.6761;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:8:2.99:0,3,24	0/0:4,0:3:2.99:0,3,24	./.	0/0:20,1:16:0:0,0,0	0/0:26,0:25:4.55:0,5,30	0/0:18,0:18:14.89:0,15,113	0/1:15,0:15:0:0,0,0	0/0:39,0:39:41.27:0,41,353	1/1:3,10:13:17.75:204,18,0	0/0:19,0:16:32.11:0,32,235	0/0:13,0:12:8.92:0,9,68	0/0:6,0:6:5.87:0,6,41	0/0:6,0:6:3:0,3,25	0/0:11,0:11:5.97:0,6,46	0/0:12,0:12:5.99:0,6,49	0/0:13,0:12:5.99:0,6,50	0/0:13,0:12:2.92:0,3,17	0/0:14,0:14:15.35:0,15,80	0/0:19,0:16:17.46:0,17,131	0/0:14,0:13:11.83:0,12,91	./.	0/0:11,0:10:5.96:0,6,47	0/0:12,0:12:0:0,0,0	0/0:10,0:10:5.93:0,6,41	0/0:15,0:15:11.90:0,12,94	0/0:17,0:17:28.13:0,28,185	0/0:22,0:22:31.82:0,32,209	0/0:5,0:5:2.80:0,3,13
chr10	19641416	.	C	CACAT	4246.89	PASS	AB=1.000;AC=44;AF=0.786;AN=56;BaseQRankSum=-3.193;DP=394;FS=4.773;HRun=0;HaplotypeScore=106.4424;InbreedingCoeff=0.2155;MQ=52.63;MQ0=11;MQRankSum=0.882;QD=12.31;ReadPosRankSum=4.007;VQSLOD=3.6758;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,0:8:3.01:44,3,0	1/1:3,0:2:3.01:68,3,0	0/0:15,0:8:21:0,21,221	0/0:21,0:15:32.84:0,33,348	1/1:24,0:23:26.56:242,27,0	1/1:18,0:18:33.40:401,33,0	1/1:14,0:14:14.75:122,15,0	0/1:40,0:40:99:352,0,154	0/0:13,0:13:20.69:0,21,234	0/1:19,0:16:30.40:172,0,30	1/1:11,0:10:13.82:157,14,0	1/1:6,0:6:5.09:83,5,0	1/1:5,0:5:4.81:30,5,0	1/1:11,0:11:15.01:193,15,0	1/1:2,10:12:10.28:232,10,0	1/1:12,0:11:12.01:185,12,0	0/1:13,0:11:7.11:87,0,7	0/1:12,0:12:35.63:65,0,36	1/1:17,0:14:19.32:273,19,0	1/1:15,0:14:21.03:310,21,0	1/1:7,0:6:5.96:45,6,0	1/1:11,0:10:12.01:184,12,0	1/1:12,0:12:14.70:121,15,0	1/1:10,0:10:6.02:113,6,0	0/1:17,0:17:9.26:243,0,9	1/1:16,0:16:0.21:220,0,0	0/1:23,0:23:5.54:248,0,6	1/1:5,0:5:1.13:57,1,0
chr10	19641418	.	C	CAT	3150.69	PASS	AB=0.922;AC=40;AF=0.714;AN=56;BaseQRankSum=-3.816;DP=388;FS=6.040;HRun=0;HaplotypeScore=98.9995;InbreedingCoeff=0.0515;MQ=50.74;MQ0=12;MQRankSum=1.227;QD=9.24;ReadPosRankSum=3.489;VQSLOD=2.9138;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:12,0:7:3.01:44,3,0	1/1:2,1:2:3.01:57,3,0	0/0:15,0:8:21:0,21,221	0/0:20,0:14:32.84:0,33,348	1/1:23,1:23:25.75:215,26,0	1/1:15,3:18:23.48:311,23,0	1/1:14,0:14:15.41:123,15,0	0/1:22,16:39:99:301,0,333	0/0:12,0:12:20.93:0,21,161	0/1:18,1:16:73.70:136,0,74	1/1:9,2:10:4.59:119,5,0	1/1:6,0:6:0.03:49,0,0	0/1:4,0:4:4.56:22,0,5	1/1:9,2:11:15.01:142,15,0	1/1:12,0:12:10.26:94,10,0	1/1:9,2:10:12.01:134,12,0	0/1:12,1:12:6.78:63,0,7	0/1:12,0:12:44.26:65,0,44	0/1:15,2:14:12.38:193,0,12	1/1:14,1:14:21.01:233,21,0	1/1:7,0:6:5.96:45,6,0	1/1:10,1:10:12.01:135,12,0	1/1:11,0:11:14.96:121,15,0	1/1:9,1:10:6.02:88,6,0	0/1:13,3:16:24.33:175,0,24	0/1:15,1:16:39.76:168,0,40	0/1:22,1:23:33.40:231,0,33	0/1:5,0:5:3.55:55,0,4
chr10	19641442	.	CATATA	C	1693.81	PASS	AB=0.930;AC=36;AF=0.692;AN=52;BaseQRankSum=3.293;DP=315;FS=8.550;HRun=0;HaplotypeScore=105.3239;InbreedingCoeff=0.2817;MQ=41.35;MQ0=25;MQRankSum=-3.679;QD=7.66;ReadPosRankSum=2.397;VQSLOD=1.7411;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:7:3.01:38,3,0	1/1:3,1:2:2.74:12,3,0	./.	0/0:7,0:2:2.80:0,3,13	0/0:11,6:16:3.84:0,4,13	1/1:12,1:13:5.72:103,6,0	0/1:10,0:9:0.05:0,0,1	0/0:44,0:44:99:0,117,2762	0/0:14,0:14:26.89:0,27,555	1/1:15,3:16:4.90:213,5,0	1/1:10,0:8:1.30:25,1,0	0/1:6,1:6:7.66:15,0,8	1/1:2,0:2:1.82:5,2,0	0/1:7,2:9:5.34:17,0,5	0/0:4,0:4:9.03:0,9,172	1/1:9,1:8:0.09:17,0,0	1/1:11,5:11:6:84,6,0	1/1:9,1:9:18.05:295,18,0	1/1:12,2:11:10.76:270,11,0	1/1:12,0:11:5.98:47,6,0	./.	1/1:9,0:8:2.98:22,3,0	0/1:5,0:4:0:0,0,0	1/1:8,1:9:2.99:23,3,0	0/1:15,0:13:5.04:115,0,5	1/1:11,5:14:10.63:259,11,0	0/1:14,2:16:11.17:248,0,11	1/1:3,0:3:3:28,3,0
chr10	19641443	.	ATAT	A	1413.81	PASS	AB=1.000;AC=39;AF=0.722;AN=54;BaseQRankSum=6.762;DP=255;FS=13.554;HRun=0;HaplotypeScore=76.7538;InbreedingCoeff=0.4007;MQ=43.84;MQ0=25;MQRankSum=-3.873;QD=8.17;ReadPosRankSum=4.865;VQSLOD=1.0714;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:10,0:4:2.96:19,3,0	1/1:4,0:2:2.74:12,3,0	./.	0/0:7,0:2:2.92:0,3,17	0/0:13,0:12:1.72:0,2,4	1/1:11,0:11:11.92:102,12,0	0/1:6,0:5:0.05:0,0,1	0/0:43,0:43:99:0,123,2696	0/0:14,0:14:26.89:0,27,441	0/1:13,0:11:6.96:142,0,7	1/1:9,0:7:2.85:34,3,0	0/1:6,0:5:0.68:20,0,1	1/1:1,0:1:1.55:4,2,0	1/1:7,0:7:1.88:28,2,0	0/0:4,0:4:8.75:0,9,111	1/1:5,0:4:3.93:13,4,0	1/1:13,0:8:6.02:74,6,0	1/1:9,0:8:18.02:210,18,0	1/1:13,0:10:21.85:190,22,0	1/1:10,0:9:5.97:53,6,0	0/1:6,0:4:0:0,0,0	1/1:5,0:4:3.01:30,3,0	0/1:3,0:2:0:0,0,0	1/1:3,0:3:3.01:32,3,0	1/1:9,2:9:0.72:77,1,0	1/1:13,1:12:22.48:258,22,0	1/1:11,2:13:21.86:207,22,0	1/1:1,0:1:3.01:49,3,0
chr10	19641446	.	TA	T	1269.84	PASS	AB=1.000;AC=42;AF=0.808;AN=52;BaseQRankSum=7.990;DP=250;FS=4.243;HRun=2;HaplotypeScore=72.2399;InbreedingCoeff=0.4860;MQ=47.11;MQ0=24;MQRankSum=-5.857;QD=7.30;ReadPosRankSum=6.191;VQSLOD=1.1156;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:8,1:3:2.96:19,3,0	1/1:4,0:2:2.74:12,3,0	./.	0/0:8,0:3:2.02:0,2,6	1/1:13,0:12:0.34:5,0,0	1/1:11,0:11:13.25:92,13,0	0/1:6,0:5:0.23:0,0,0	0/0:46,0:46:99:0,138,1882	0/0:14,0:14:30.08:0,30,365	1/1:10,2:10:21.02:147,21,0	1/1:10,0:8:4.25:30,4,0	1/1:5,0:4:3.89:35,4,0	1/1:1,0:1:2.97:20,3,0	1/1:7,0:7:5.03:29,5,0	0/0:3,0:3:8.94:0,9,102	1/1:5,0:4:5.72:29,6,0	1/1:12,0:7:5.99:49,6,0	1/1:8,1:8:17.21:144,17,0	1/1:10,2:10:24.79:190,25,0	1/1:8,0:7:5.91:48,6,0	./.	1/1:5,0:4:2.99:24,3,0	0/1:3,0:2:0:0,0,0	1/1:2,0:2:3:26,3,0	1/1:11,0:9:7.39:52,7,0	1/1:14,0:12:28.52:187,29,0	1/1:11,1:12:29.46:243,29,0	1/1:3,0:3:3:25,3,0
chr10	19641447	.	A	AC	2655.55	PASS	AB=0.500;AC=43;AF=0.827;AN=52;BaseQRankSum=8.664;DP=255;FS=2.142;HRun=0;HaplotypeScore=73.3664;InbreedingCoeff=0.5383;MQ=47.08;MQ0=24;MQRankSum=-5.452;QD=14.84;ReadPosRankSum=4.773;VQSLOD=4.8781;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,4:3:3.01:38,3,0	1/1:3,2:3:3.01:31,3,0	./.	0/0:8,0:3:2.11:0,2,6	1/1:6,4:11:3.48:35,3,0	1/1:2,6:11:14.62:190,15,0	1/1:1,7:7:2.75:25,3,0	0/0:47,0:47:99:0,110,1744	0/0:13,0:13:29.88:0,30,411	1/1:7,5:11:29.72:355,30,0	1/1:5,4:9:9.02:116,9,0	1/1:2,3:4:6.02:89,6,0	1/1:0,1:1:3.01:48,3,0	1/1:2,3:7:6.02:73,6,0	0/0:3,0:3:8.97:0,9,75	1/1:1,1:3:6.02:78,6,0	1/1:9,3:8:12.03:154,12,0	1/1:3,7:9:17.99:177,18,0	1/1:4,5:10:26.90:292,27,0	1/1:2,1:8:6.02:74,6,0	./.	1/1:0,2:2:3.01:42,3,0	0/1:0,3:2:0:1,0,0	1/1:2,0:3:6.02:82,6,0	1/1:2,4:8:14.06:116,14,0	1/1:6,6:12:30.03:350,30,0	1/1:6,7:14:32.60:360,33,0	1/1:3,0:3:8.97:70,9,0
chr10	19642250	.	T	TCA	15024.61	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=9.782;DP=635;FS=0.000;HRun=0;HaplotypeScore=195.8641;InbreedingCoeff=0.9976;MQ=75.54;MQ0=1;MQRankSum=-5.233;QD=31.50;ReadPosRankSum=5.793;VQSLOD=5.6800;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,21:28:51.16:737,51,0	1/1:3,6:12:29.51:349,30,0	0/0:40,0:33:75.21:0,75,908	0/0:46,0:39:78.21:0,78,940	1/1:8,12:20:32.88:459,33,0	1/1:9,10:18:38.85:572,39,0	1/1:5,17:22:41.73:646,42,0	0/0:35,0:35:81.24:0,81,992	0/0:21,0:21:38.54:0,39,485	1/1:13,13:25:59.76:887,60,0	1/1:2,15:17:47.97:675,48,0	1/1:8,18:26:56.86:891,57,0	1/1:7,11:18:45.04:646,45,0	1/1:6,11:17:39.11:588,39,0	0/0:15,0:15:26.96:0,27,301	1/1:12,12:24:45.91:612,46,0	1/1:6,6:12:21.07:319,21,0	1/1:5,13:18:35.54:522,36,0	1/1:6,11:17:43.25:665,43,0	1/1:13,17:29:59.51:855,60,0	1/1:5,18:23:42.14:678,42,0	1/1:10,11:21:22.20:584,22,0	1/1:5,15:20:44.98:685,45,0	1/1:12,18:30:50.44:757,50,0	1/1:6,10:16:35.33:524,35,0	1/1:2,16:18:51.16:824,51,0	1/1:10,20:30:66.81:1060,67,0	1/1:5,8:13:30.10:490,30,0
chr10	19642277	.	T	TACATACACACACAC	11068.90	PASS	AB=0.911;AC=48;AF=0.857;AN=56;BaseQRankSum=6.988;DP=669;FS=1.682;HRun=0;HaplotypeScore=308.2866;InbreedingCoeff=0.4092;MQ=45.81;MQ0=8;MQRankSum=1.144;QD=18.79;ReadPosRankSum=2.133;VQSLOD=2.6230;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:26:26.55:273,27,0	1/1:9,5:18:14.99:294,15,0	0/0:42,0:18:47.79:0,48,422	0/0:38,0:19:46.85:0,47,399	1/1:26,0:26:29.99:421,30,0	1/1:15,0:14:23.84:261,24,0	1/1:17,0:17:17.93:224,18,0	0/1:27,0:27:47.49:47,0,339	0/1:12,0:21:99:114,0,119	1/1:34,0:33:84.91:960,85,0	1/1:20,0:20:32.97:346,33,0	1/1:28,0:28:48.32:551,48,0	1/1:15,0:14:25.91:270,26,0	1/1:20,0:20:33.01:545,33,0	0/1:16,0:17:86.78:228,0,87	1/1:27,0:27:34.30:342,34,0	1/1:7,4:15:15.78:297,16,0	0/1:21,0:21:64.44:533,0,64	1/1:24,0:20:46.26:689,46,0	1/1:25,1:25:42.43:504,42,0	1/1:24,0:24:32.90:336,33,0	1/1:25,0:27:45.26:849,45,0	1/1:21,0:20:36:401,36,0	1/1:29,0:29:32.59:373,33,0	1/1:21,0:21:27.45:417,27,0	1/1:25,0:25:71.69:691,72,0	1/1:29,0:32:71.34:768,71,0	1/1:11,0:12:26.82:337,27,0
chr10	19644302	.	CAAA	C	13064.91	PASS	AC=48;AF=0.889;AN=54;BaseQRankSum=-3.316;DP=555;FS=0.000;HRun=12;HaplotypeScore=128.5217;InbreedingCoeff=0.7855;MQ=46.10;MQ0=7;MQRankSum=-1.513;QD=26.23;ReadPosRankSum=0.230;VQSLOD=3.3759;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:13,18:30:69.10:842,69,0	1/1:1,4:5:15.05:189,15,0	./.	0/0:14,0:4:0:0,0,0	1/1:6,22:27:56.99:681,57,0	1/1:6,19:25:66.18:817,66,0	1/1:11,16:27:54.12:700,54,0	1/1:13,12:23:48.07:572,48,0	0/0:7,0:17:12.42:0,12,30	1/1:17,10:27:58.55:707,59,0	1/1:10,16:26:57.10:690,57,0	1/1:5,14:20:43.68:560,44,0	1/1:9,3:12:30.07:362,30,0	1/1:6,13:19:51.09:599,51,0	1/1:11,19:30:75.20:944,75,0	1/1:5,9:14:33.02:399,33,0	1/1:11,11:22:45.10:551,45,0	1/1:11,10:20:33.02:403,33,0	1/1:6,9:15:36.09:454,36,0	1/1:10,25:35:81.19:1000,81,0	0/0:9,0:8:0:0,0,0	1/1:7,11:17:39.10:474,39,0	1/1:4,14:18:31.64:407,32,0	1/1:6,5:11:14.95:189,15,0	1/1:8,9:16:27.06:341,27,0	1/1:9,10:19:33.05:417,33,0	1/1:8,13:20:45:520,45,0	1/1:6,4:9:21.03:249,21,0
chr10	19644308	.	A	AAAAG	6631.10	PASS	AB=0.992;AC=25;AF=0.446;AN=56;BaseQRankSum=-14.440;DP=594;FS=5.959;HRun=0;HaplotypeScore=190.9427;InbreedingCoeff=-0.6544;MQ=43.92;MQ0=7;MQRankSum=-1.584;QD=12.26;ReadPosRankSum=6.924;VQSLOD=3.4046;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:32,2:33:99:411,0,149	0/1:5,0:5:20.01:99,0,20	0/0:14,0:4:0.88:0,1,2	0/0:17,0:5:2.68:0,3,15	0/1:30,0:29:80.53:470,0,81	0/1:26,0:26:99:239,0,147	0/1:24,1:25:99:348,0,117	0/1:28,0:25:4.52:379,0,5	0/0:16,0:16:33.74:0,34,246	0/1:31,0:31:99:296,0,224	0/1:25,0:25:2.43:448,0,2	0/1:22,0:23:99:198,0,139	0/1:13,0:13:5.11:224,0,5	0/1:21,0:21:76.94:336,0,77	0/1:29,0:29:48.22:513,0,48	0/1:19,0:19:99:136,0,127	0/1:27,0:27:99:219,0,121	0/1:23,1:23:99:177,0,116	0/1:17,0:17:15.72:268,0,16	0/1:36,0:36:95.66:588,0,96	0/0:6,0:5:5.96:0,6,43	0/1:16,0:15:12.85:272,0,13	0/1:22,0:21:99:279,0,123	0/1:14,0:14:9.46:140,0,9	0/1:17,0:16:99:160,0,122	0/1:18,0:18:99:112,0,149	0/1:28,0:27:99:181,0,195	1/1:13,0:12:3.33:138,3,0
chr10	19644322	.	GAA	G	12715.14	PASS	AB=1.000;AC=53;AF=0.946;AN=56;BaseQRankSum=-3.050;DP=615;FS=1.058;HRun=11;HaplotypeScore=153.7512;InbreedingCoeff=0.7515;MQ=51.86;MQ0=9;MQRankSum=-2.918;QD=21.62;ReadPosRankSum=4.858;VQSLOD=2.7674;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,25:33:75.16:805,75,0	1/1:2,4:6:12.03:128,12,0	0/0:27,0:11:14.92:0,15,141	0/1:22,0:6:1.06:1,0,1	1/1:2,26:27:69.08:712,69,0	1/1:5,20:26:48.03:564,48,0	1/1:3,22:25:69.17:741,69,0	1/1:11,17:25:41.69:437,42,0	1/1:4,11:15:33.07:348,33,0	1/1:3,25:28:72.15:757,72,0	1/1:5,18:23:30.35:485,30,0	1/1:7,19:26:51.12:608,51,0	1/1:3,8:11:18.03:196,18,0	1/1:2,13:16:33.11:403,33,0	1/1:9,16:25:59.95:621,60,0	1/1:5,16:21:45.09:478,45,0	1/1:4,21:25:39.09:414,39,0	1/1:4,19:23:45.08:534,45,0	1/1:9,13:21:39.03:400,39,0	1/1:12,29:41:98.62:1014,99,0	1/1:0,5:5:12.03:126,12,0	1/1:4,9:12:33.08:356,33,0	1/1:5,20:24:53.61:557,54,0	1/1:3,13:16:5.98:64,6,0	1/1:3,20:22:48.11:509,48,0	1/1:5,19:24:56.07:628,56,0	1/1:2,25:26:60.15:636,60,0	1/1:4,5:8:18.03:191,18,0
chr10	19646021	.	CG	C	19720.19	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=2.266;DP=585;FS=4.133;HRun=1;HaplotypeScore=86.0092;InbreedingCoeff=0.9993;MQ=94.54;MQ0=0;MQRankSum=-8.996;QD=38.74;ReadPosRankSum=5.131;VQSLOD=5.3144;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,35:35:87.25:1194,87,0	1/1:0,9:9:27.09:374,27,0	0/0:30,0:30:87.26:0,87,1323	0/0:23,0:23:68.08:0,68,954	1/1:0,15:15:45.04:583,45,0	1/1:0,14:14:42.14:587,42,0	1/1:0,18:18:54.18:755,54,0	1/1:0,22:22:66.19:887,66,0	0/0:23,0:23:69.21:0,69,1076	1/1:0,23:23:66.21:906,66,0	1/1:0,13:13:33.50:439,33,0	1/1:0,27:27:78.26:1090,78,0	1/1:0,26:26:75.25:1049,75,0	1/1:0,19:19:57.19:797,57,0	1/1:0,16:16:42.14:587,42,0	1/1:0,20:20:51.17:713,51,0	1/1:0,37:37:99:1552,111,0	1/1:0,23:23:66.22:923,66,0	1/1:0,19:19:57.14:744,57,0	1/1:0,11:11:29.97:392,30,0	1/1:0,31:31:87.29:1216,87,0	1/1:0,22:22:59.97:816,60,0	1/1:0,15:15:39.13:545,39,0	1/1:0,19:19:57.19:797,57,0	1/1:0,16:16:42.14:587,42,0	1/1:0,26:26:72.21:969,72,0	1/1:0,19:19:48.16:671,48,0	1/1:0,14:14:39.13:545,39,0
chr10	19648818	.	A	ACG	1255.95	PASS	AB=0.969;AC=20;AF=0.357;AN=56;BaseQRankSum=0.599;DP=864;FS=26.123;HRun=0;HaplotypeScore=250.4621;InbreedingCoeff=-0.5398;MQ=49.43;MQ0=9;MQRankSum=-2.478;QD=2.00;ReadPosRankSum=-5.506;VQSLOD=0.2141;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:41:49.78:0,50,555	0/0:11,0:11:2.51:0,3,176	0/0:29,0:16:45.08:0,45,550	0/0:32,0:19:47.95:0,48,525	0/1:24,0:23:58.14:58,0,410	0/1:12,10:23:60.19:60,0,151	0/1:44,0:43:86.13:86,0,597	0/0:22,0:20:55.97:0,56,425	0/1:30,0:31:99:105,0,567	0/1:48,1:48:99:173,0,870	0/1:16,0:16:76.91:77,0,99	0/1:36,13:49:1.26:1,0,659	0/1:35,0:34:99:118,0,367	0/1:37,0:37:8.43:8,0,564	0/1:30,0:30:19.05:19,0,161	0/1:21,0:21:99:115,0,205	0/1:30,0:30:35.28:35,0,502	0/1:28,0:27:67.57:68,0,578	0/1:34,0:34:99:123,0,402	0/0:22,0:22:19.37:0,19,380	0/1:61,0:60:90.82:91,0,592	0/1:28,0:28:97.24:97,0,313	0/0:17,0:17:6.75:0,7,246	0/0:39,20:61:30.71:0,31,540	0/1:21,0:20:2.73:3,0,154	0/1:30,1:31:98.59:99,0,671	0/1:24,0:24:33.53:34,0,599	0/1:11,0:10:39.95:40,0,97
chr10	19648824	.	A	ACACACACACGCACACG	12300.47	PASS	AB=0.963;AC=42;AF=0.750;AN=56;BaseQRankSum=-5.583;DP=857;FS=30.099;HRun=0;HaplotypeScore=395.5072;InbreedingCoeff=-0.0375;MQ=48.35;MQ0=10;MQRankSum=0.598;QD=15.28;ReadPosRankSum=-1.474;VQSLOD=1.9828;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:47,0:46:14.48:431,0,14	1/1:6,3:11:0.46:229,0,0	0/0:23,0:10:23.70:0,24,323	0/0:28,0:12:2.72:0,3,267	0/1:25,0:24:16.26:262,0,16	1/1:23,0:23:20.95:260,21,0	1/1:43,0:42:17.82:580,18,0	1/1:22,0:20:22.79:279,23,0	0/1:30,0:30:99:181,0,276	1/1:51,0:50:35.55:1475,36,0	1/1:13,0:13:20.44:437,20,0	1/1:46,0:46:5.80:457,6,0	1/1:33,0:32:34.99:758,35,0	1/1:41,0:41:7.14:411,7,0	1/1:29,0:29:25.35:548,25,0	1/1:20,0:20:18.66:617,19,0	0/1:31,0:31:32.66:291,0,33	0/1:27,0:26:15.98:582,0,16	1/1:35,0:35:21.49:720,21,0	0/1:19,0:19:1.16:101,0,1	1/1:62,0:61:32.60:512,33,0	0/1:29,0:29:9.69:530,0,10	1/1:14,0:14:0.99:39,1,0	0/1:63,0:63:13.20:417,0,13	0/1:10,9:24:45.79:222,0,46	1/1:33,0:33:55.52:1320,56,0	0/1:24,0:24:37.28:467,0,37	1/1:9,0:8:13.04:173,13,0
chr10	19648828	.	ACG	A	1027.43	PASS	AB=0.942;AC=18;AF=0.321;AN=56;BaseQRankSum=-4.156;DP=843;FS=8.293;HRun=0;HaplotypeScore=252.4857;InbreedingCoeff=-0.2779;MQ=48.13;MQ0=12;MQRankSum=-0.412;QD=1.81;ReadPosRankSum=-4.499;VQSLOD=0.6891;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:40,6:45:99:119,0,275	0/0:9,0:9:11.76:0,12,79	0/0:25,0:11:26.67:0,27,320	0/0:25,0:10:8.16:0,8,205	0/1:23,2:24:0.38:0,0,291	0/1:24,0:24:30.72:31,0,147	0/1:41,2:42:80.83:81,0,388	1/1:19,0:17:25.89:169,26,0	0/0:28,0:28:54.39:0,54,724	0/1:46,3:48:99:101,0,780	0/1:13,1:14:87.46:87,0,153	0/1:46,1:47:1.53:2,0,327	0/0:38,0:37:1.17:0,1,413	0/0:39,1:40:23.64:0,24,449	0/1:16,13:29:99:210,0,121	0/0:19,0:19:35.87:0,36,357	0/0:31,1:32:22.24:0,22,430	0/1:25,1:25:12.85:13,0,350	0/1:29,2:31:64.22:64,0,253	0/1:18,0:18:19.19:19,0,151	0/1:61,1:60:12.48:12,0,475	0/1:29,2:31:58.31:58,0,272	0/0:14,0:14:22.10:0,22,157	0/1:62,2:64:99:158,0,278	0/0:22,0:21:14.65:0,15,95	0/1:31,1:32:56.37:56,0,477	0/0:21,1:22:37.71:0,38,437	0/1:9,0:8:1.34:1,0,113
chr10	19648854	.	G	GCA	793.50	PASS	AB=0.581;AC=1;AF=0.018;AN=56;BaseQRankSum=-1.014;DP=863;FS=1.600;HRun=0;HaplotypeScore=235.6868;InbreedingCoeff=0.1670;MQ=51.01;MQ0=15;MQRankSum=-0.337;QD=22.04;ReadPosRankSum=0.697;VQSLOD=3.7595;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:63.62:0,64,734	0/0:8,0:7:10.84:0,11,113	0/0:34,0:8:18.03:0,18,203	0/0:47,0:25:46.45:0,46,564	0/0:22,0:22:33.10:0,33,398	0/0:27,0:27:36.08:0,36,409	0/0:40,0:44:68.16:0,68,722	0/0:5,0:17:21.06:0,21,239	0/1:10,24:36:6.20:868,0,6	0/0:39,0:39:30.09:0,30,617	0/0:14,0:14:30.94:0,31,349	0/0:44,0:45:41.99:0,42,480	0/0:37,0:36:70.76:0,71,902	0/0:41,0:41:41.42:0,41,728	0/0:29,0:29:35.97:0,36,433	0/0:25,0:25:42.55:0,43,491	0/0:32,0:32:34.50:0,34,536	0/0:24,0:25:6.92:0,7,341	0/0:18,0:19:32.66:0,33,334	0/0:10,0:11:9.82:0,10,110	0/0:57,0:63:90.62:0,91,1021	0/0:32,0:32:38.57:0,39,396	0/0:14,0:14:24.54:0,25,286	0/0:66,0:67:65.95:0,66,770	0/0:22,0:23:2.98:0,3,199	0/0:25,0:26:11.71:0,12,373	0/0:25,0:27:38.92:0,39,422	0/0:7,0:7:21.06:0,21,251
chr10	19650767	.	AT	A	645.08	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.803;DP=771;FS=4.458;HRun=2;HaplotypeScore=84.3269;InbreedingCoeff=0.9985;MQ=91.06;MQ0=0;MQRankSum=-2.887;QD=30.72;ReadPosRankSum=0.723;VQSLOD=3.2237;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,138,2016	0/0:11,0:11:27.09:0,27,405	0/0:34,0:35:99:0,104,1450	0/0:26,0:26:78.26:0,78,1148	0/0:34,0:34:99:0,102,1506	0/0:28,0:28:84.28:0,84,1253	0/0:30,0:30:90.30:0,90,1348	0/0:30,0:30:90.29:0,90,1314	1/1:0,21:21:57.03:740,57,0	0/0:34,0:34:99:0,99,1458	0/0:32,0:32:96.32:0,96,1434	0/0:30,0:30:90.30:0,90,1348	0/0:29,0:29:87.29:0,87,1298	0/0:19,0:19:57.19:0,57,854	0/0:31,0:31:93.32:0,93,1394	0/0:18,0:18:54.18:0,54,799	0/0:17,0:17:48.16:0,48,713	0/0:28,0:28:81.27:0,81,1214	0/0:22,0:22:63.16:0,63,877	0/0:28,0:28:81.21:0,81,1152	0/0:35,0:35:99:0,105,1574	0/0:21,0:21:60.19:0,60,880	0/0:28,0:28:84.28:0,84,1254	0/0:45,0:45:99:0,135,1977	0/0:24,0:24:66.21:0,66,953	0/0:21,0:21:63.21:0,63,940	0/0:34,0:34:99:0,102,1486	0/0:10,0:10:30.10:0,30,448
chr10	19652134	.	C	CCGCTGTCT	29756.38	PASS	AB=0.792;AC=49;AF=0.875;AN=56;BaseQRankSum=-4.860;DP=591;FS=0.595;HRun=0;HaplotypeScore=168.2004;InbreedingCoeff=0.8604;MQ=67.19;MQ0=0;MQRankSum=-10.255;QD=55.21;ReadPosRankSum=2.702;VQSLOD=4.9187;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:21,10:31:26.78:1103,27,0	1/1:2,7:10:21.07:736,21,0	0/0:12,0:12:30.10:0,30,735	0/0:15,0:15:39.13:0,39,955	0/1:14,4:19:0.18:0,0,0	1/1:9,11:20:33.11:1327,33,0	1/1:7,19:28:63.17:2526,63,0	1/1:19,2:25:45.08:1131,45,0	0/0:25,0:25:66.20:0,66,1622	1/1:21,4:27:51.17:1766,51,0	1/1:10,2:12:8.49:276,8,0	1/1:15,9:26:36.12:1450,36,0	1/1:12,17:29:63.13:2391,63,0	1/1:9,22:31:66.23:2790,66,0	1/1:11,17:30:48.16:2035,48,0	1/1:5,13:18:39.13:1579,39,0	1/1:14,8:23:21.07:882,21,0	1/1:14,13:27:45.15:1899,45,0	1/1:14,3:17:24.08:813,24,0	1/1:8,3:11:6.02:214,6,0	1/1:22,14:39:20.73:788,21,0	1/1:5,5:11:8.76:366,9,0	1/1:4,7:12:12.04:510,12,0	1/1:15,12:30:18.06:745,18,0	1/1:10,6:17:24.08:897,24,0	1/1:9,9:18:34.27:1167,34,0	1/1:2,15:18:39.13:1632,39,0	1/1:5,5:10:18.06:733,18,0
chr10	19652341	.	C	CA	29703.24	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-10.176;DP=784;FS=2.608;HRun=1;HaplotypeScore=74.1589;InbreedingCoeff=0.9992;MQ=87.18;MQ0=0;MQRankSum=-9.519;QD=42.49;ReadPosRankSum=5.960;VQSLOD=4.7525;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,56:57:99:2446,154,0	1/1:0,10:10:24.08:383,24,0	0/0:23,0:23:48.49:0,48,741	0/0:33,0:33:87.24:0,87,1153	1/1:1,23:24:60.20:959,60,0	1/1:2,23:25:66.23:1053,66,0	1/1:0,33:33:93.32:1486,93,0	1/1:1,20:21:57.18:885,57,0	0/0:29,0:29:87.29:0,87,1216	1/1:0,26:26:78.27:1241,78,0	1/1:0,15:15:36.12:575,36,0	1/1:0,34:34:87.30:1391,87,0	1/1:0,31:31:87.27:1390,87,0	1/1:1,27:28:75.26:1198,75,0	1/1:0,29:29:84.29:1342,84,0	1/1:1,31:32:45.36:1300,45,0	1/1:1,42:43:99:1694,108,0	1/1:1,30:30:87.30:1391,87,0	1/1:1,25:26:75.26:1199,75,0	1/1:1,17:18:36.12:575,36,0	1/1:2,51:52:99:2251,141,0	1/1:0,18:18:51.17:815,51,0	1/1:1,17:18:48.16:767,48,0	1/1:0,35:35:99:1582,99,0	1/1:0,29:28:66.23:1055,66,0	1/1:0,26:26:72.18:1095,72,0	1/1:0,22:22:60.20:958,60,0	1/1:0,14:14:42.14:671,42,0
chr10	19652707	.	CCCA	C	287.46	PASS	AB=0.745;AC=7;AF=0.130;AN=54;BaseQRankSum=3.804;DP=269;FS=26.267;HRun=0;HaplotypeScore=59.0560;InbreedingCoeff=-0.1914;MQ=56.55;MQ0=7;MQRankSum=-3.633;QD=4.64;ReadPosRankSum=-3.372;VQSLOD=-0.6652;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:17,6:22:24.66:0,25,914	./.	0/0:18,1:5:6.27:0,6,81	0/0:24,0:6:17.24:0,17,182	0/0:5,1:6:15.05:0,15,318	0/0:4,2:6:12.01:0,12,222	0/0:17,1:16:42.60:0,43,921	0/1:14,0:14:16.80:17,0,277	0/0:11,0:10:15.11:0,15,354	0/0:8,0:8:21.06:0,21,348	0/0:3,0:3:3.01:0,3,40	0/0:7,1:7:11.79:0,12,207	0/0:4,0:4:12.04:0,12,270	0/0:3,2:5:9.03:0,9,189	0/0:7,0:7:8.01:0,8,238	0/1:6,6:11:71.16:71,0,385	0/0:8,0:8:18.95:0,19,395	0/0:6,1:6:15.05:0,15,344	0/1:4,1:4:41.60:42,0,114	0/0:3,0:3:3.90:0,4,71	0/0:15,2:15:36.12:0,36,791	0/1:1,3:3:19.04:19,0,50	0/0:7,3:6:9.01:0,9,199	0/0:6,2:6:11.53:0,12,215	0/0:9,2:8:7.27:0,7,141	0/1:7,5:11:99:101,0,417	0/1:3,4:6:35.64:36,0,129	0/1:6,2:7:99:128,0,109
chr10	19655819	.	A	AT	4617.41	PASS	AB=0.800;AC=16;AF=0.286;AN=56;BaseQRankSum=14.318;DP=612;FS=0.355;HRun=8;HaplotypeScore=104.5577;InbreedingCoeff=0.8533;MQ=71.48;MQ0=0;MQRankSum=-2.855;QD=22.97;ReadPosRankSum=1.040;VQSLOD=4.5870;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,30:37:75.22:863,75,0	1/1:1,8:9:24.07:277,24,0	0/0:17,0:17:41.86:0,42,361	0/1:18,0:16:2.39:2,0,187	1/1:8,14:22:14.66:422,15,0	0/0:20,0:20:51.02:0,51,467	0/0:18,0:18:54.01:0,54,489	0/0:25,0:25:47.98:0,48,435	0/0:27,0:27:69.03:0,69,631	0/0:30,0:30:81.02:0,81,736	0/0:19,1:21:27.47:0,27,489	0/0:25,0:25:63.02:0,63,577	0/0:28,0:28:78.04:0,78,714	0/0:13,0:13:31.67:0,32,323	1/1:3,28:31:78.23:897,78,0	0/0:25,0:25:66.01:0,66,599	0/0:25,0:25:72.01:0,72,653	0/0:20,0:20:54.03:0,54,494	0/0:18,0:18:47.96:0,48,426	0/0:31,0:32:89.07:0,89,800	0/0:13,0:13:30.01:0,30,274	0/0:22,0:22:66.04:0,66,604	0/0:13,0:13:35.31:0,35,328	0/0:19,0:19:51.03:0,51,466	1/1:1,18:19:51.15:589,51,0	0/1:9,18:27:16.24:569,0,16	1/1:5,19:24:57.17:652,57,0	1/1:3,11:14:30.09:346,30,0
chr10	19656257	.	A	AT	13550.66	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-7.173;DP=603;FS=0.000;HRun=7;HaplotypeScore=74.8753;InbreedingCoeff=0.9227;MQ=79.57;MQ0=1;MQRankSum=-6.214;QD=24.20;ReadPosRankSum=5.339;VQSLOD=4.8689;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,0:33:83.10:425,83,0	1/1:0,0:14:37.38:190,37,0	0/0:22,0:22:24.91:0,25,316	0/0:21,0:17:11.36:0,11,179	1/1:4,0:27:67.91:345,68,0	1/1:0,14:15:42.10:492,42,0	1/1:0,23:23:63.19:761,63,0	1/1:1,21:22:63.18:750,63,0	1/1:2,24:26:69.21:832,69,0	1/1:1,18:19:54.17:652,54,0	1/1:3,24:27:66.15:767,66,0	1/1:1,18:19:54.06:632,54,0	1/1:2,20:22:39.12:471,39,0	1/1:1,17:18:39.12:471,39,0	1/1:1,16:17:42.13:507,42,0	1/1:1,13:14:39.12:467,39,0	1/1:1,21:22:48.15:580,48,0	1/1:3,24:27:8.25:667,8,0	1/1:4,19:23:57.13:646,57,0	1/1:2,32:34:96.29:1159,96,0	1/1:1,8:9:12.04:145,12,0	1/1:4,25:29:69.12:790,69,0	1/1:5,15:20:42.13:507,42,0	1/1:0,16:16:30.09:362,30,0	1/1:2,0:21:43.13:219,43,0	1/1:4,2:23:54.80:317,55,0	1/1:2,0:28:63.22:321,63,0	1/1:0,0:11:14.38:73,14,0
chr10	19657269	.	G	GC	1375.17	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-2.395;DP=802;FS=10.969;HRun=3;HaplotypeScore=79.4303;InbreedingCoeff=0.9979;MQ=83.93;MQ0=0;MQRankSum=-0.496;QD=31.98;ReadPosRankSum=0.642;VQSLOD=3.1757;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:42:99:0,129,1548	0/0:16,0:16:42.11:0,42,491	0/0:28,0:28:74.85:0,75,826	0/0:24,0:24:56.70:0,57,623	0/0:31,0:31:84.22:0,84,974	0/0:24,0:24:69.20:0,69,815	0/0:39,0:39:99:0,105,1259	0/0:28,0:28:78.24:0,78,936	0/0:29,0:29:84.23:0,84,993	0/0:33,0:33:93.29:0,93,1115	0/0:21,0:21:63.17:0,63,736	0/0:33,0:33:93.28:0,93,1116	0/0:27,0:27:69.21:0,69,828	0/0:29,0:29:84.23:0,84,985	1/1:5,38:42:99:1470,105,0	0/0:20,0:20:57.17:0,57,683	0/0:39,0:39:99:0,111,1319	0/0:24,0:24:66.18:0,66,779	0/0:26,0:26:69.21:0,69,827	0/0:32,0:32:87.25:0,87,1032	0/0:35,0:35:99:0,102,1208	0/0:27,0:27:75.21:0,75,881	0/0:25,0:25:63.19:0,63,755	0/0:25,0:25:75.22:0,75,889	0/0:18,0:18:54.17:0,54,648	0/0:33,0:33:99:0,99,1180	0/0:42,0:42:99:0,123,1454	0/0:8,0:8:24.07:0,24,288
chr10	19658084	.	AGACTT	A	634.46	PASS	AB=0.975;AC=10;AF=0.179;AN=56;BaseQRankSum=4.498;DP=711;FS=2.730;HRun=0;HaplotypeScore=197.5216;InbreedingCoeff=-0.2182;MQ=75.61;MQ0=3;MQRankSum=-6.734;QD=2.62;ReadPosRankSum=-8.169;VQSLOD=0.4816;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:25:99:144,0,1421	0/0:9,0:9:26.98:0,27,793	0/0:36,0:26:78.27:0,78,2304	0/0:39,0:31:74.62:0,75,2396	0/0:27,0:27:74.15:0,74,1882	0/0:37,0:37:87.30:0,87,2602	0/0:26,4:30:8.21:0,8,2044	0/0:38,0:38:99:0,114,3576	0/0:27,0:27:66.22:0,66,1886	0/0:29,0:29:75.58:0,76,2526	0/0:19,0:19:57.20:0,57,1722	0/1:26,0:26:9.06:9,0,1435	0/1:32,0:32:44.05:44,0,2183	0/1:24,0:24:63.33:63,0,1743	0/1:27,13:41:50.31:50,0,2269	0/1:19,0:19:99:153,0,1394	0/0:22,0:22:58.88:0,59,1631	0/1:12,0:12:63.44:63,0,819	0/0:12,0:12:32.25:0,32,900	0/0:31,0:31:23.67:0,24,2456	0/0:28,0:28:61.96:0,62,1676	0/1:20,0:20:99:145,0,1535	0/1:22,0:22:9.19:9,0,1508	0/1:21,0:21:95.96:96,0,885	0/0:23,0:23:66.23:0,66,1913	0/0:22,0:22:66.23:0,66,2014	0/0:37,0:37:99:0,105,3207	0/0:3,0:3:9.03:0,9,245
chr10	19658089	.	T	TTCATCATCA	12871.53	PASS	AB=0.718;AC=47;AF=0.904;AN=52;BaseQRankSum=-2.407;DP=784;FS=0.000;HRun=0;HaplotypeScore=220.2506;InbreedingCoeff=0.2610;MQ=68.73;MQ0=4;MQRankSum=1.186;QD=19.83;ReadPosRankSum=2.390;VQSLOD=3.9932;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:17,7:33:12.04:395,12,0	1/1:8,1:11:3.01:135,3,0	./.	0/0:35,0:27:0.47:0,0,1	1/1:17,8:32:9.02:404,9,0	1/1:24,13:39:15.05:673,15,0	1/1:30,0:30:3:68,3,0	0/0:36,0:36:3:0,3,26	1/1:20,0:38:14.81:583,15,0	1/1:20,10:33:33.11:1223,33,0	1/1:15,5:25:6.02:269,6,0	1/1:13,11:27:24.08:1030,24,0	1/1:20,9:34:21.07:842,21,0	1/1:15,8:28:24.08:999,24,0	1/1:41,0:42:21.27:453,21,0	1/1:14,5:25:12.04:460,12,0	1/1:19,1:25:6.02:175,6,0	1/1:9,3:12:9.03:357,9,0	1/1:15,1:16:6.02:204,6,0	1/1:20,11:35:18.06:786,18,0	./.	1/1:16,5:28:12.04:433,12,0	1/1:13,6:20:9.03:368,9,0	1/1:12,8:22:8.93:357,9,0	1/1:18,3:23:6.02:269,6,0	0/1:17,7:28:8.14:1178,0,8	1/1:26,9:40:21.07:942,21,0	1/1:1,2:3:6.02:269,6,0
chr10	19659072	.	A	AACACACAC	1607.39	PASS	AB=1.000;AC=19;AF=0.365;AN=52;BaseQRankSum=0.747;DP=690;FS=7.655;HRun=0;HaplotypeScore=178.1784;InbreedingCoeff=0.7660;MQ=53.84;MQ0=32;MQRankSum=-3.460;QD=9.24;ReadPosRankSum=-2.510;VQSLOD=1.6598;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,9:41:0.47:0,0,1	1/1:10,0:12:3.01:105,3,0	./.	./.	1/1:11,0:11:6.02:117,6,0	0/0:17,0:16:27.06:0,27,529	0/0:35,0:37:35.03:0,35,1124	1/1:20,0:17:6.02:102,6,0	1/1:16,0:18:12.01:162,12,0	0/0:27,0:25:26.93:0,27,527	0/0:15,0:13:12.03:0,12,209	0/0:32,0:32:25.25:0,25,881	0/1:23,0:23:18.64:19,0,518	0/0:23,0:22:30.09:0,30,637	1/1:28,1:22:6.01:148,6,0	0/0:28,0:30:44.60:0,45,926	0/0:37,0:36:65.69:0,66,1503	0/0:25,0:26:51.13:0,51,1153	0/0:17,0:12:18.52:0,19,363	0/0:15,0:16:21.53:0,22,461	0/0:55,0:50:45.16:0,45,1684	0/0:22,0:24:26.90:0,27,604	0/0:15,0:19:26.91:0,27,395	0/0:48,0:48:87.30:0,87,2137	1/1:19,1:19:12.01:216,12,0	1/1:10,6:18:19.31:528,19,0	1/1:12,1:11:9.03:247,9,0	1/1:3,0:4:6.01:148,6,0
chr10	19659157	.	C	CCA	4485.69	PASS	AB=0.775;AC=22;AF=0.407;AN=54;BaseQRankSum=-5.390;DP=917;FS=4.909;HRun=0;HaplotypeScore=131.1010;InbreedingCoeff=-0.3368;MQ=46.56;MQ0=91;MQRankSum=2.425;QD=6.56;ReadPosRankSum=0.081;VQSLOD=4.3820;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:39:5.34:0,5,236	0/0:17,0:16:8.48:0,8,100	0/0:46,0:4:2.94:0,3,18	0/1:56,0:5:10.05:18,0,10	0/0:24,0:23:3.46:0,3,34	0/1:17,2:17:19.95:157,0,20	0/1:19,10:28:22.73:125,0,23	0/0:15,0:5:0:0,0,0	0/0:22,0:36:55.61:0,56,463	0/1:31,12:41:59.54:283,0,60	0/1:19,2:21:24.89:83,0,25	0/1:26,15:41:71.36:291,0,71	0/1:11,1:30:0.26:133,0,0	0/1:9,19:30:19.18:466,0,19	./.	0/1:17,14:31:54.71:281,0,55	1/1:12,19:33:30.57:460,31,0	0/1:12,11:20:35.59:337,0,36	0/1:21,0:10:2.93:63,0,3	0/1:10,14:26:4.98:352,0,5	0/1:33,42:68:74.27:818,0,74	0/1:13,8:22:39.60:112,0,40	1/1:13,1:14:6.02:83,6,0	0/1:22,14:39:8.97:304,0,9	0/1:49,0:48:99:107,0,127	0/1:24,0:22:7.96:8,0,151	0/1:24,0:34:5.97:6,0,209	0/0:15,0:12:13.52:0,14,113
chr10	19659243	.	C	CCA	2020.45	PASS	AB=0.799;AC=12;AF=0.231;AN=52;BaseQRankSum=-4.352;DP=880;FS=2.592;HRun=0;HaplotypeScore=114.5774;InbreedingCoeff=0.4622;MQ=45.29;MQ0=140;MQRankSum=1.767;QD=8.35;ReadPosRankSum=1.599;VQSLOD=3.5542;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:35,11:34:9.24:361,9,0	1/1:2,1:9:3.01:47,3,0	0/0:40,0:2:6.02:0,6,68	./.	0/1:16,3:13:40.14:126,0,40	0/0:17,0:15:28.87:0,29,298	0/0:29,0:22:38.95:0,39,436	0/0:35,0:15:33.10:0,33,386	./.	0/0:32,0:28:58.92:0,59,599	0/0:12,0:13:30.07:0,30,335	0/0:33,0:31:54.08:0,54,595	0/0:38,0:33:48.14:0,48,562	0/0:29,0:26:42.06:0,42,448	0/1:62,19:62:99:740,0,951	0/0:45,0:43:69.11:0,69,769	0/0:29,0:27:33.05:0,33,362	0/0:22,0:18:33.06:0,33,372	0/0:23,0:12:33.09:0,33,376	0/0:28,0:24:54.07:0,54,610	0/0:84,0:81:99:0,144,1638	0/0:30,0:30:60.08:0,60,672	0/0:13,0:10:21.06:0,21,246	0/0:36,0:35:57.12:0,57,633	0/1:14,4:14:19.17:174,0,19	0/1:17,4:15:99:208,0,114	1/1:21,8:23:28.92:425,29,0	1/1:3,4:4:6.02:94,6,0
chr10	19659321	.	CCA	C	62.97	PASS	AB=0.927;AC=9;AF=0.188;AN=48;BaseQRankSum=4.450;DP=772;FS=12.151;HRun=0;HaplotypeScore=84.6782;InbreedingCoeff=-0.2195;MQ=43.73;MQ0=141;MQRankSum=-0.434;QD=0.26;ReadPosRankSum=-1.253;VQSLOD=0.1010;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:21:18.06:0,18,285	0/0:11,1:9:6.02:0,6,96	./.	./.	0/0:19,0:14:18.06:0,18,290	0/0:23,0:15:21.07:0,21,333	0/0:26,1:18:9.03:0,9,145	0/1:10,2:2:30.35:30,0,39	./.	0/1:30,1:24:0.29:0,0,472	0/0:17,0:12:15.04:0,15,213	0/1:32,2:28:0.77:1,0,497	0/1:50,4:43:60.86:61,0,577	0/0:35,1:31:45.15:0,45,725	./.	0/1:39,1:31:9.28:9,0,360	0/0:19,0:13:12.04:0,12,173	0/0:27,0:20:16.09:0,16,195	0/0:22,0:8:18.06:0,18,290	0/0:20,0:15:24.06:0,24,363	0/0:94,1:66:38.89:0,39,595	0/1:29,1:21:22.50:23,0,178	0/0:17,0:7:3.01:0,3,49	0/0:45,0:35:30.03:0,30,425	0/0:13,1:6:9.03:0,9,145	0/1:18,1:9:21.22:21,0,173	0/1:21,0:16:5.34:5,0,360	0/1:2,1:3:30.38:30,0,42
chr10	19659469	.	CCA	C	3693.56	PASS	AB=0.878;AC=21;AF=0.375;AN=56;BaseQRankSum=10.629;DP=789;FS=3.570;HRun=0;HaplotypeScore=59.1945;InbreedingCoeff=0.6226;MQ=42.15;MQ0=148;MQRankSum=3.251;QD=12.69;ReadPosRankSum=2.286;VQSLOD=2.8699;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:11,28:24:57.13:675,57,0	1/1:1,8:7:8.57:108,9,0	0/0:44,0:3:6:0,6,71	0/0:38,0:3:5.99:0,6,71	1/1:2,14:13:27.08:328,27,0	0/0:22,1:16:8.75:0,9,628	0/0:22,0:12:27.09:0,27,422	1/1:18,10:18:13.75:256,14,0	0/1:13,2:13:0.28:0,0,494	0/0:37,0:21:66.21:0,66,1016	0/1:20,0:6:4.68:5,0,200	0/1:35,1:25:5.77:6,0,895	0/0:31,1:19:17.78:0,18,775	0/0:29,1:22:18.25:0,18,777	1/1:4,24:24:60.18:727,60,0	0/0:28,0:22:42.14:0,42,644	0/0:29,0:21:57.19:0,57,859	0/0:32,0:20:57.11:0,57,858	0/1:20,1:11:9.33:9,0,328	0/0:20,2:16:5.73:0,6,576	0/0:71,0:39:99:0,105,1642	0/0:23,1:15:5.74:0,6,582	0/0:22,1:14:2.78:0,3,540	0/0:41,1:31:44.87:0,45,1205	1/1:13,10:10:30.09:363,30,0	0/1:5,13:16:1.16:417,0,1	1/1:6,16:16:39.12:473,39,0	1/1:0,16:14:27.08:328,27,0
chr10	19662177	.	ACG	A	217.31	PASS	AB=0.917;AC=3;AF=0.054;AN=56;BaseQRankSum=7.817;DP=812;FS=1.083;HRun=0;HaplotypeScore=125.4118;InbreedingCoeff=-0.0562;MQ=58.80;MQ0=20;MQRankSum=-1.432;QD=1.99;ReadPosRankSum=-1.427;VQSLOD=1.6716;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:48,1:49:74.78:0,75,823	0/0:10,0:10:18:0,18,166	0/0:67,0:27:17.61:0,18,310	0/1:63,0:21:39.81:40,0,350	0/0:27,0:27:42.45:0,42,363	0/0:26,0:26:37.20:0,37,978	0/0:24,0:24:37.79:0,38,872	0/1:18,9:27:99:265,0,344	0/0:15,0:14:8.98:0,9,82	0/0:36,0:36:69.79:0,70,1615	0/0:17,0:17:48.08:0,48,797	0/0:26,0:25:39.27:0,39,948	0/0:17,0:17:47.95:0,48,739	0/0:14,0:14:39.04:0,39,669	0/0:33,0:33:19.20:0,19,341	0/0:19,0:19:24.74:0,25,742	0/0:37,0:37:64.04:0,64,1213	0/0:27,0:27:59.04:0,59,1147	0/0:22,0:22:23.03:0,23,539	0/0:28,0:28:66.80:0,67,1218	0/0:53,0:53:99:0,107,2284	0/0:29,0:29:39.35:0,39,1138	0/0:22,0:22:27.33:0,27,891	0/0:43,0:43:45.78:0,46,1706	0/0:33,0:32:74.96:0,75,718	0/1:19,0:19:6.31:6,0,384	0/0:17,0:17:32.62:0,33,274	0/0:10,0:10:27.05:0,27,295
chr10	19662179	.	G	GCACA	5027.22	PASS	AB=0.840;AC=21;AF=0.375;AN=56;BaseQRankSum=-2.654;DP=821;FS=1.914;HRun=0;HaplotypeScore=144.2425;InbreedingCoeff=0.7434;MQ=58.20;MQ0=20;MQRankSum=0.189;QD=13.13;ReadPosRankSum=-0.394;VQSLOD=4.5995;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,23:50:47.10:931,47,0	1/1:1,8:12:17.36:317,17,0	0/1:65,0:22:0.83:1,0,44	0/1:61,0:20:7.37:7,0,202	1/1:5,19:28:35.59:742,36,0	0/0:21,0:25:51.14:0,51,740	0/0:21,0:23:41.65:0,42,644	1/1:27,0:27:36.06:444,36,0	1/1:2,1:14:6.02:105,6,0	0/0:31,0:34:90.21:0,90,1343	0/0:17,0:17:42.11:0,42,659	0/0:22,0:24:57.10:0,57,833	0/0:15,0:16:23.45:0,23,506	0/0:13,0:14:33.11:0,33,544	1/1:9,2:37:2.67:349,3,0	0/0:14,0:19:32.48:0,32,634	0/0:34,0:37:59.23:0,59,924	0/0:27,0:28:60.52:0,61,983	0/0:21,0:24:35.73:0,36,431	0/0:27,0:27:66.02:0,66,1000	0/0:52,0:55:99:0,111,1707	0/0:24,0:28:48.31:0,48,935	0/0:18,0:21:51.15:0,51,775	0/0:42,0:45:52.25:0,52,1379	1/1:10,20:33:5.21:1074,5,0	1/1:11,7:21:23.78:397,24,0	1/1:9,7:18:11.61:221,12,0	0/1:1,10:14:22.94:439,0,23
chr10	19662930	.	CTGTT	C	483.24	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=1.781;DP=699;FS=1.078;HRun=0;HaplotypeScore=138.3272;InbreedingCoeff=0.8509;MQ=68.95;MQ0=4;MQRankSum=2.486;QD=20.14;ReadPosRankSum=0.715;VQSLOD=3.1747;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:32:69.24:0,69,1132	0/0:7,0:7:15.05:0,15,246	0/0:23,0:19:9.03:0,9,203	0/0:28,0:27:30.10:0,30,697	0/0:29,0:29:44.18:0,44,693	0/0:29,0:28:63.20:0,63,1454	0/0:23,0:23:39.13:0,39,916	0/0:29,0:29:24.03:0,24,365	0/0:6,0:17:30.10:0,30,523	0/0:25,0:25:54.19:0,54,1293	0/0:21,0:21:42.13:0,42,940	0/0:31,0:31:66.18:0,66,1536	0/0:31,0:31:66.20:0,66,1529	0/0:24,0:24:51.18:0,51,1220	1/1:10,14:24:36.12:578,36,0	0/0:21,0:21:54.19:0,54,1277	0/0:28,1:29:9.04:0,9,1232	0/0:22,0:22:33.11:0,33,778	0/0:22,0:21:19.31:0,19,436	0/0:25,0:25:69.24:0,69,1613	0/0:26,0:26:63.22:0,63,1492	0/0:11,0:11:24.07:0,24,519	0/0:26,0:26:54.10:0,54,1159	0/0:36,0:36:90.27:0,90,2099	0/0:21,0:21:45.15:0,45,749	0/0:35,0:35:84.27:0,84,1378	0/0:40,0:40:87.30:0,87,1427	0/0:11,0:11:12.04:0,12,197
chr10	19662948	.	G	GTTTA	10493.15	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=-13.676;DP=703;FS=1.050;HRun=0;HaplotypeScore=103.3840;InbreedingCoeff=0.9061;MQ=61.21;MQ0=4;MQRankSum=1.072;QD=49.03;ReadPosRankSum=3.132;VQSLOD=5.8546;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,34:36:69.24:1855,69,0	1/1:0,7:7:15.05:402,15,0	0/0:14,0:9:17.11:0,17,215	0/0:31,0:30:60.48:0,60,872	1/1:1,23:24:50.94:1175,51,0	0/0:26,0:25:78.15:0,78,1216	0/0:28,0:28:77.99:0,78,1004	1/1:2,24:28:74.17:708,74,0	0/1:17,0:17:56.85:434,0,57	0/0:30,0:30:87.14:0,87,1266	0/0:19,0:19:51.10:0,51,778	0/0:31,0:31:84.18:0,84,1372	0/0:34,0:34:99:0,99,1433	0/0:23,0:23:66.13:0,66,1035	0/0:22,0:22:48.09:0,48,503	0/0:26,0:26:78.15:0,78,1182	0/0:30,0:30:66.06:0,66,1208	0/0:19,0:20:38.47:0,38,710	0/0:19,0:18:50.79:0,51,593	0/0:27,0:27:78.11:0,78,1244	0/0:29,0:29:78.15:0,78,1246	0/0:13,0:13:35.86:0,36,464	0/0:29,0:29:86.51:0,87,1028	0/0:38,0:38:99:0,108,1783	1/1:0,21:22:45.09:1146,45,0	1/1:0,32:33:93.19:2114,93,0	1/1:2,33:37:87.30:2336,87,0	1/1:2,7:9:12.04:322,12,0
chr10	19663114	.	T	TA	4761.76	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-11.079;DP=594;FS=13.430;HRun=10;HaplotypeScore=61.8286;InbreedingCoeff=0.9948;MQ=58.91;MQ0=1;MQRankSum=1.077;QD=23.93;ReadPosRankSum=-1.569;VQSLOD=4.0012;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,28:33:69.17:736,69,0	1/1:2,12:14:30.08:320,30,0	0/0:12,0:8:19.17:0,19,144	0/0:9,0:8:14.76:0,15,116	1/1:4,20:24:60.09:625,60,0	0/0:28,0:28:71.88:0,72,591	0/0:19,0:20:49.92:0,50,391	1/1:8,28:36:81.18:848,81,0	0/0:11,0:11:29.97:0,30,246	0/0:26,0:25:62.89:0,63,517	0/0:22,0:22:61.74:0,62,497	0/0:21,0:22:52.93:0,53,419	0/0:19,0:19:50.92:0,51,418	0/0:20,0:20:53.91:0,54,439	0/0:1,0:15:26.48:0,26,77	0/0:26,0:26:68.85:0,69,557	0/0:28,0:28:77.84:0,78,632	0/0:14,0:14:30.22:0,30,226	0/0:19,0:19:47.91:0,48,391	0/0:31,0:31:74.85:0,75,611	0/0:18,0:18:24.71:0,25,346	0/0:14,0:16:40.96:0,41,322	0/0:24,0:24:62.92:0,63,517	0/0:14,0:14:22.27:0,22,298	1/1:5,14:19:39.10:416,39,0	1/1:4,25:29:59.70:666,60,0	1/1:3,19:22:48.12:512,48,0	1/1:2,20:22:60.15:640,60,0
chr10	19663262	.	T	TGTGAGATGAGCTAGCAGAA	29127.89	PASS	AB=0.708;AC=54;AF=0.964;AN=56;BaseQRankSum=0.260;DP=233;FS=24.811;HRun=0;HaplotypeScore=273.2178;InbreedingCoeff=-0.0604;MQ=51.51;MQ0=0;MQRankSum=-2.356;QD=125.01;ReadPosRankSum=2.022;VQSLOD=3.3731;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,0:7:12.04:666,12,0	1/1:4,0:4:6.02:348,6,0	0/1:2,0:4:18.43:387,0,18	0/1:4,1:6:13.46:292,0,13	1/1:20,0:20:31.50:1375,31,0	1/1:12,0:12:30.10:1572,30,0	1/1:8,0:8:24.03:1054,24,0	1/1:12,0:12:36.12:1451,36,0	1/1:5,0:5:12.04:828,12,0	1/1:19,0:19:52.06:2961,52,0	1/1:10,0:10:24.07:1071,24,0	1/1:8,0:8:18.06:1298,18,0	1/1:8,0:8:24.08:1464,24,0	1/1:12,0:12:18.06:1213,18,0	1/1:9,0:9:24.08:1486,24,0	1/1:9,0:9:27.08:1517,27,0	1/1:8,0:8:21.07:1546,21,0	1/1:4,0:4:9.03:432,9,0	1/1:5,0:5:12.04:696,12,0	1/1:6,0:6:15.05:1261,15,0	1/1:6,0:6:15.05:548,15,0	1/1:8,0:8:15.05:923,15,0	1/1:14,0:14:39.13:2115,39,0	1/1:3,0:2:3.01:87,3,0	1/1:4,0:4:12.04:581,12,0	1/1:12,0:12:24.01:807,24,0	1/1:8,0:8:18.06:753,18,0	1/1:2,0:2:6.02:396,6,0
chr10	19664673	.	AACACACACACACAC	A	2406.34	PASS	AB=0.821;AC=30;AF=0.600;AN=50;BaseQRankSum=2.907;DP=527;FS=2.248;HRun=0;HaplotypeScore=187.1489;InbreedingCoeff=0.5650;MQ=79.33;MQ0=6;MQRankSum=-3.700;QD=8.10;ReadPosRankSum=-0.622;VQSLOD=2.2766;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:27:14.98:0,15,662	0/0:9,0:9:6.02:0,6,292	./.	./.	0/0:15,0:14:22.32:0,22,1203	1/1:14,11:25:9.03:252,9,0	1/1:15,4:19:6.02:191,6,0	0/0:19,0:19:3.01:0,3,83	0/0:19,0:19:24.08:0,24,1119	1/1:18,0:18:3:27,3,0	0/1:8,9:18:13.72:93,0,14	1/1:9,5:13:8.72:320,9,0	1/1:8,5:13:9.03:291,9,0	1/1:10,6:16:3.01:73,3,0	1/1:15,5:19:9.03:349,9,0	1/1:15,0:16:11.98:169,12,0	1/1:18,0:18:6:117,6,0	0/1:11,0:10:18.98:19,0,159	1/1:16,4:20:8.46:248,8,0	./.	1/1:21,0:21:5.99:50,6,0	1/1:11,0:21:3.01:58,3,0	1/1:18,5:23:3.48:82,3,0	1/1:16,6:23:9.03:246,9,0	0/0:16,0:16:9.03:0,9,465	0/0:21,0:21:34.32:0,34,1485	0/0:14,0:14:24.55:0,25,1163	0/0:8,0:8:12.04:0,12,653
chr10	19664727	.	C	CAGAGAG	3486.30	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=1.120;DP=578;FS=3.362;HRun=0;HaplotypeScore=139.3262;InbreedingCoeff=0.9096;MQ=69.18;MQ0=17;MQRankSum=-1.521;QD=24.21;ReadPosRankSum=-1.350;VQSLOD=3.3356;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,19:30:4.19:61,4,0	1/1:10,0:10:11.60:293,12,0	0/0:23,0:17:42.08:0,42,899	0/0:33,0:25:64.04:0,64,1355	1/1:28,0:27:33.08:641,33,0	0/0:23,0:23:33.11:0,33,716	0/0:20,0:19:45.13:0,45,885	0/0:39,0:37:99:0,102,2225	0/0:17,0:17:33.04:0,33,725	0/0:13,0:13:39.06:0,39,808	0/0:16,0:16:18.06:0,18,388	0/0:17,0:16:33.11:0,33,702	0/0:16,0:16:39.13:0,39,825	0/0:18,0:17:36.10:0,36,733	0/0:22,0:21:44.66:0,45,914	0/0:17,0:17:42.14:0,42,923	0/0:30,0:30:81.28:0,81,1680	0/0:11,0:10:27.09:0,27,543	0/0:11,0:11:27.06:0,27,566	0/0:20,0:18:45.15:0,45,982	0/0:32,0:31:66.21:0,66,1412	0/0:21,0:21:36.12:0,36,740	0/0:16,0:16:30.10:0,30,624	0/0:19,0:18:33.11:0,33,699	1/1:3,1:19:5.71:196,6,0	1/1:8,1:26:60.20:1312,60,0	1/1:20,0:20:48.06:877,48,0	1/1:4,2:7:3.01:105,3,0
chr10	19665852	.	AT	A	5736.38	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=13.500;DP=693;FS=11.564;HRun=8;HaplotypeScore=67.8362;InbreedingCoeff=0.9997;MQ=88.61;MQ0=0;MQRankSum=-6.554;QD=24.31;ReadPosRankSum=1.482;VQSLOD=5.0934;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,36:40:99:1014,105,0	1/1:1,11:12:30.05:290,30,0	0/0:33,1:34:57.74:0,58,931	0/0:20,0:20:42.10:0,42,481	1/1:5,22:27:60.09:579,60,0	0/0:29,0:29:81.25:0,81,978	0/0:32,0:32:81.23:0,81,966	1/1:6,28:34:81.07:773,81,0	0/0:19,0:19:51.16:0,51,616	0/0:34,0:34:90.14:0,90,1063	0/0:17,0:17:45.14:0,45,543	0/0:29,0:29:78.21:0,78,919	0/0:22,0:22:60.18:0,60,725	0/0:22,0:22:60.17:0,60,715	1/1:4,30:34:90.14:869,90,0	0/0:19,0:19:51.13:0,51,593	0/0:23,0:23:54.17:0,54,652	0/0:17,0:17:42.13:0,42,507	0/0:25,0:25:66.18:0,66,784	0/0:26,0:26:69.17:0,69,817	0/0:19,0:19:54.17:0,54,652	0/0:27,0:27:78.24:0,78,942	0/0:19,0:19:54.17:0,54,650	0/0:23,0:23:63.19:0,63,761	1/1:2,12:14:27.03:261,27,0	1/1:2,32:34:62.89:879,63,0	1/1:1,21:22:57.09:550,57,0	1/1:1,18:19:54.08:522,54,0
chr10	19667226	.	T	TC	108.34	PASS	AB=0.782;AC=2;AF=0.036;AN=56;BaseQRankSum=1.677;DP=506;FS=0.000;HRun=0;HaplotypeScore=64.9675;InbreedingCoeff=0.1146;MQ=50.52;MQ0=28;MQRankSum=2.986;QD=1.44;ReadPosRankSum=1.243;VQSLOD=1.2845;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:25:66.28:0,66,499	0/0:4,0:4:12.02:0,12,129	0/0:52,0:7:5.81:0,6,36	0/1:53,0:13:4.66:5,0,96	0/0:25,0:24:62.80:0,63,529	0/0:12,0:12:28.99:0,29,233	0/0:9,0:9:23.52:0,24,190	0/0:35,0:31:76.01:0,76,595	0/0:17,0:17:47.71:0,48,454	0/0:23,0:23:42.72:0,43,468	0/0:19,0:17:41.41:0,41,316	0/0:15,0:15:34.02:0,34,246	0/0:6,0:4:10.51:0,11,80	0/0:10,0:9:20.45:0,20,153	0/1:5,15:22:5.20:182,0,5	0/0:11,0:11:27.73:0,28,211	0/0:26,0:22:37.86:0,38,323	0/0:19,0:18:35.46:0,35,291	0/0:16,0:14:34.56:0,35,263	0/0:14,0:13:32.50:0,33,191	0/0:4,0:4:12:0,12,104	0/0:4,0:3:4.56:0,5,32	0/0:6,0:6:14.22:0,14,91	0/0:3,0:3:6.02:0,6,75	0/0:12,0:12:34.39:0,34,306	0/0:23,0:23:67.75:0,68,611	0/0:24,0:24:63.14:0,63,483	0/0:16,0:16:36.61:0,37,300
chr10	19669855	.	G	GA	3183.15	PASS	AB=0.808;AC=19;AF=0.339;AN=56;BaseQRankSum=-6.709;DP=634;FS=2.724;HRun=13;HaplotypeScore=71.6026;InbreedingCoeff=0.5829;MQ=71.23;MQ0=1;MQRankSum=0.916;QD=11.09;ReadPosRankSum=-1.495;VQSLOD=3.0508;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:8,24:36:10.21:446,0,10	0/1:5,4:10:2.73:108,0,3	0/0:30,0:21:7.56:0,8,87	0/1:14,0:12:11.41:17,0,11	1/1:12,14:28:13.13:409,13,0	0/0:21,1:22:6.81:0,7,183	0/0:12,1:14:12.89:0,13,225	1/1:18,24:42:10.53:488,11,0	1/1:6,15:21:21.38:324,21,0	0/0:29,2:31:48.83:0,49,449	0/0:13,1:14:4.84:0,5,177	0/1:19,0:19:12.95:13,0,186	0/0:19,0:19:41.53:0,42,286	0/0:19,0:20:30.26:0,30,294	0/0:20,0:21:22.32:0,22,268	0/0:22,2:25:27.69:0,28,326	0/0:24,0:28:71.44:0,71,460	0/0:17,1:19:15.71:0,16,237	0/0:22,0:24:51.56:0,52,339	0/0:24,1:26:64.43:0,64,436	0/1:10,3:13:50.83:51,0,128	0/0:19,0:19:34.82:0,35,228	0/0:20,0:22:24.54:0,25,320	0/0:13,0:13:20.78:0,21,144	1/1:2,15:18:9.29:217,9,0	1/1:12,19:32:33.27:428,33,0	1/1:4,24:30:58.65:536,59,0	1/1:9,14:23:21.47:342,21,0
chr10	19670010	.	CTGTT	C	4674.32	PASS	AB=1.000;AC=49;AF=0.942;AN=52;BaseQRankSum=4.409;DP=392;FS=2.751;HRun=0;HaplotypeScore=128.5502;InbreedingCoeff=0.2155;MQ=39.12;MQ0=27;MQRankSum=3.904;QD=12.17;ReadPosRankSum=-1.574;VQSLOD=4.5059;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:20:1.70:30,2,0	0/1:5,0:5:0:0,0,0	./.	./.	1/1:16,0:16:8.81:69,9,0	1/1:11,0:10:14.64:229,15,0	1/1:11,0:11:11.72:174,12,0	0/1:24,0:23:4.21:4,0,406	1/1:19,0:19:29.34:391,29,0	1/1:5,14:17:42.16:462,42,0	1/1:15,0:15:13.95:243,14,0	1/1:9,1:9:1.92:78,2,0	1/1:11,0:11:14.91:207,15,0	1/1:7,0:7:9.02:123,9,0	1/1:16,0:15:23.65:330,24,0	1/1:14,0:13:18.80:237,19,0	1/1:14,0:13:1.83:120,2,0	1/1:24,0:23:13.62:508,14,0	1/1:8,0:7:15.05:237,15,0	1/1:1,10:10:0.47:1,0,0	1/1:15,0:15:18.01:293,18,0	1/1:4,11:14:0.34:1,0,0	1/1:3,12:13:2.84:14,3,0	1/1:22,0:19:15.03:228,15,0	0/1:17,0:16:16.39:95,0,16	1/1:18,0:16:13.04:433,13,0	1/1:17,0:14:5.61:68,6,0	1/1:9,0:4:9.01:99,9,0
chr10	19670044	.	CTGTGTG	C	3528.64	PASS	AB=0.884;AC=35;AF=0.625;AN=56;BaseQRankSum=2.035;DP=433;FS=0.000;HRun=0;HaplotypeScore=143.2068;InbreedingCoeff=0.1827;MQ=50.37;MQ0=11;MQRankSum=2.482;QD=10.66;ReadPosRankSum=1.508;VQSLOD=2.7658;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:3,19:22:3.84:19,4,0	0/1:0,5:5:0.02:0,0,0	0/0:19,0:6:0.42:0,0,278	0/0:30,0:12:35.86:0,36,873	0/0:1,12:13:0:0,0,0	1/1:16,0:16:16.65:232,17,0	0/1:15,0:15:8.11:175,0,8	0/0:25,0:25:66.06:0,66,1733	0/1:12,0:12:3.43:96,0,3	1/1:18,0:18:12.79:217,13,0	1/1:13,0:13:20.14:161,20,0	1/1:5,0:11:3.88:23,4,0	1/1:7,0:7:13.06:93,13,0	1/1:8,0:8:12.43:94,12,0	0/0:15,0:14:32.83:0,33,335	0/1:14,0:14:25.18:100,0,25	0/1:14,0:14:8.37:95,0,8	1/1:26,0:26:4.23:316,4,0	0/1:14,0:13:40.99:155,0,41	1/1:15,0:15:20.99:142,21,0	0/1:20,0:20:59.87:183,0,60	0/1:14,0:14:3.31:93,0,3	0/1:13,0:13:36.46:36,0,48	1/1:23,0:20:20.73:155,21,0	0/1:3,3:6:0.05:0,0,0	1/1:0,19:18:54.06:911,54,0	1/1:1,19:20:7.56:161,8,0	0/1:1,4:5:1.08:70,0,1
chr10	19670909	.	T	TA	8492.03	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-6.527;DP=564;FS=0.000;HRun=10;HaplotypeScore=94.7188;InbreedingCoeff=0.9112;MQ=73.54;MQ0=1;MQRankSum=-2.972;QD=16.21;ReadPosRankSum=1.738;VQSLOD=5.0557;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,0:25:37.12:192,37,0	1/1:3,0:10:24.83:121,25,0	0/0:17,2:16:19.56:0,20,152	0/0:20,0:16:25.16:0,25,169	1/1:5,2:35:83.57:460,84,0	1/1:1,0:18:45.45:228,45,0	1/1:6,0:18:24.32:118,24,0	1/1:8,25:33:75.08:745,75,0	1/1:6,0:15:19.89:100,20,0	1/1:9,17:26:48.09:493,48,0	1/1:4,16:21:34.75:392,35,0	1/1:4,14:17:24.28:339,24,0	1/1:5,15:20:28.70:416,29,0	1/1:4,17:21:34.14:464,34,0	1/1:4,19:24:26.87:436,27,0	1/1:4,9:14:35.82:339,36,0	1/1:7,23:31:48.99:587,49,0	1/1:7,11:18:4.96:273,5,0	1/1:10,13:24:24.23:372,24,0	1/1:6,16:22:34.09:412,34,0	1/1:2,5:7:15.04:160,15,0	1/1:4,13:17:29.77:290,30,0	1/1:6,13:19:36.36:365,36,0	1/1:6,16:22:39.93:427,40,0	1/1:2,0:21:45.49:228,45,0	1/1:5,5:20:40.85:286,41,0	1/1:2,1:18:28.54:175,29,0	1/1:0,0:6:14.29:74,14,0
chr10	19671235	.	G	GT	818.61	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.319;DP=740;FS=3.900;HRun=1;HaplotypeScore=105.0687;InbreedingCoeff=0.8161;MQ=56.28;MQ0=9;MQRankSum=4.868;QD=28.23;ReadPosRankSum=1.023;VQSLOD=3.5188;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:35:99:0,99,1353	0/0:8,0:8:21.07:0,21,293	0/0:22,0:4:12.02:0,12,138	0/0:33,0:14:2.80:0,3,467	0/0:32,0:31:54.16:0,54,734	0/0:25,0:25:57.19:0,57,795	0/0:25,0:25:69.18:0,69,898	0/0:24,0:22:57.18:0,57,782	0/0:29,0:29:81.27:0,81,1130	0/0:25,0:25:75.24:0,75,1032	0/0:15,0:15:39.13:0,39,545	0/0:34,0:34:99:0,99,1361	0/0:37,0:37:99:0,108,1490	0/0:29,0:29:84.28:0,84,1168	1/1:1,28:29:69.22:913,69,0	0/0:22,0:22:66.21:0,66,906	0/0:47,0:47:99:0,141,1916	0/0:35,0:35:99:0,105,1447	0/0:25,0:19:54.17:0,54,736	0/0:23,0:22:57.19:0,57,790	0/0:43,0:43:99:0,126,1738	0/0:20,0:20:57.19:0,57,795	0/0:16,0:16:45.14:0,45,612	0/0:48,0:48:99:0,144,2014	0/0:13,0:13:36.12:0,36,503	0/0:18,0:18:54.18:0,54,755	0/0:19,0:18:42.14:0,42,585	0/0:6,0:6:18.06:0,18,250
chr10	19674593	.	C	CT	1037.56	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-8.319;DP=597;FS=11.256;HRun=3;HaplotypeScore=57.2831;InbreedingCoeff=0.9699;MQ=94.85;MQ0=0;MQRankSum=-2.392;QD=30.52;ReadPosRankSum=-3.528;VQSLOD=1.2271;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:90.27:0,90,1080	0/0:4,0:4:12.04:0,12,144	0/0:28,0:28:75.21:0,75,883	0/0:29,0:29:78.22:0,78,910	0/0:12,0:12:36.11:0,36,431	0/0:19,0:19:54.17:0,54,648	0/0:26,0:26:75.23:0,75,900	1/1:6,28:34:81.91:1132,82,0	0/0:24,0:24:69.18:0,69,804	0/0:18,0:18:51.16:0,51,611	0/0:13,0:13:39.12:0,39,468	0/0:32,0:32:90.26:0,90,1069	0/0:21,0:21:57.16:0,57,672	0/0:19,0:19:54.16:0,54,647	0/0:34,0:34:96.27:0,96,1129	0/0:19,0:19:51.14:0,51,600	0/0:17,0:17:48.13:0,48,564	0/0:15,0:15:45.10:0,45,523	0/0:16,0:16:45.14:0,45,540	0/0:15,0:15:45.14:0,45,539	0/0:32,0:32:93.27:0,93,1103	0/0:16,0:16:42.13:0,42,503	0/0:12,0:12:36.10:0,36,420	0/0:21,0:21:63.19:0,63,756	0/0:20,0:20:57.17:0,57,684	0/0:30,0:30:87.26:0,87,1034	0/0:23,0:23:66.20:0,66,792	0/0:14,0:14:42.13:0,42,504
chr10	19674931	.	CTCCT	C	6819.54	PASS	AB=1.000;AC=43;AF=0.827;AN=52;BaseQRankSum=2.105;DP=689;FS=8.060;HRun=0;HaplotypeScore=113.0825;InbreedingCoeff=0.6875;MQ=69.13;MQ0=9;MQRankSum=2.483;QD=12.65;ReadPosRankSum=1.437;VQSLOD=4.0526;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:17,13:28:20.71:474,21,0	1/1:6,6:12:11.97:143,12,0	./.	0/0:25,0:20:0:0,0,0	1/1:19,10:29:11.97:147,12,0	0/0:21,0:29:18.95:0,19,322	0/0:18,0:24:6.02:0,6,87	./.	0/0:17,0:25:24.07:0,24,396	1/1:6,9:14:27.01:376,27,0	1/1:17,9:26:12.04:185,12,0	1/1:13,7:21:18.05:259,18,0	1/1:17,12:30:27:396,27,0	1/1:15,10:24:18.06:277,18,0	0/1:28,0:28:9.98:10,0,672	1/1:10,11:21:24.08:369,24,0	1/1:17,9:26:17.19:275,17,0	1/1:9,6:15:12.04:184,12,0	1/1:11,4:14:9.03:138,9,0	1/1:20,13:33:24.01:321,24,0	1/1:15,17:32:33.11:507,33,0	1/1:18,15:33:27.02:387,27,0	1/1:16,12:28:7.01:349,7,0	1/1:14,20:34:42.14:646,42,0	1/1:13,14:27:21.07:323,21,0	1/1:11,13:24:39.10:545,39,0	1/1:8,14:22:27.09:415,27,0	1/1:8,3:11:6.02:92,6,0
chr10	19675305	.	ACT	A	10719.19	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=15.187;DP=571;FS=2.212;HRun=0;HaplotypeScore=69.0094;InbreedingCoeff=0.9958;MQ=86.90;MQ0=1;MQRankSum=-6.721;QD=39.85;ReadPosRankSum=5.014;VQSLOD=6.5761;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:66.23:0,66,1235	0/0:5,0:5:15.05:0,15,281	0/0:20,0:20:57.19:0,57,1028	0/0:19,0:19:54.17:0,54,922	0/0:26,0:26:78.25:0,78,1422	0/0:22,0:22:66.23:0,66,1224	0/0:14,0:14:36.12:0,36,674	0/0:43,0:43:99:0,123,2237	0/0:29,0:29:87.30:0,87,1629	1/1:0,26:26:75.22:1081,75,0	1/1:0,18:18:51.17:751,51,0	1/1:0,17:17:51.17:751,51,0	1/1:1,13:14:39.13:567,39,0	1/1:0,19:19:54.18:795,54,0	1/1:0,23:23:57.19:839,57,0	1/1:0,18:17:48.16:706,48,0	1/1:0,19:19:48.16:706,48,0	1/1:0,17:17:42.14:618,42,0	1/1:1,16:17:48.13:684,48,0	1/1:0,20:20:57.16:816,57,0	1/1:0,14:14:39.13:574,39,0	1/1:0,15:15:45.11:638,45,0	1/1:1,22:23:57.19:839,57,0	1/1:0,9:9:24.08:353,24,0	0/0:29,0:29:81.28:0,81,1517	0/0:19,1:20:16.04:0,16,1019	0/0:29,0:29:81.28:0,81,1516	0/0:24,0:24:69.19:0,69,1255
chr10	19676175	.	TAGCAGCAGCAGC	T	737.32	PASS	AC=12;AF=0.300;AN=40;BaseQRankSum=3.444;DP=437;FS=15.326;HRun=0;HaplotypeScore=140.0881;InbreedingCoeff=0.6828;MQ=70.73;MQ0=4;MQRankSum=-3.524;QD=8.88;ReadPosRankSum=-2.170;VQSLOD=1.4710;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:9,0:8:1.51:22,2,0	./.	0/0:27,0:17:8.39:0,8,103	0/0:27,0:16:10.58:0,11,117	./.	./.	1/1:17,13:30:12:246,12,0	0/0:11,0:11:0.89:0,1,2	1/1:10,1:11:3.01:63,3,0	0/0:13,0:13:1.77:0,2,5	./.	0/0:27,0:27:30.10:0,30,1236	0/0:18,0:17:24.04:0,24,796	0/0:19,0:19:41.81:0,42,1809	0/0:21,0:21:36.12:0,36,1204	0/0:21,0:21:33.11:0,33,1528	0/0:25,0:25:42.14:0,42,1622	0/0:11,0:11:23.57:0,24,992	./.	0/0:2,0:2:0:0,0,0	0/0:35,0:34:12.04:0,12,333	./.	./.	0/0:45,0:45:48.60:0,49,2134	./.	1/1:11,0:11:3:25,3,0	1/1:9,7:16:12.04:411,12,0	1/1:3,3:6:3.01:103,3,0
chr10	19676219	.	GCA	G	614.92	PASS	AB=0.855;AC=10;AF=0.208;AN=48;BaseQRankSum=7.676;DP=372;FS=13.587;HRun=0;HaplotypeScore=64.4122;InbreedingCoeff=-0.0703;MQ=47.52;MQ0=11;MQRankSum=-5.869;QD=5.75;ReadPosRankSum=0.156;VQSLOD=1.0094;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:3.01:0,3,42	./.	0/0:9,1:6:12.01:0,12,146	0/0:30,0:15:35.34:0,35,469	./.	0/0:10,0:8:6.02:0,6,83	0/0:39,0:38:37.43:0,37,798	0/0:6,0:4:11.40:0,11,56	0/0:6,0:6:15.05:0,15,209	0/0:5,0:5:15.05:0,15,206	1/1:2,0:2:0.47:1,0,0	0/0:20,0:20:5.20:0,5,425	0/0:22,0:22:4.70:0,5,352	0/1:16,9:25:99:294,0,625	0/1:16,5:21:99:126,0,329	0/0:20,0:20:5.59:0,6,532	0/1:14,9:23:97.87:98,0,565	0/1:11,2:13:99:160,0,358	0/0:6,0:5:15.05:0,15,208	0/0:4,0:3:3.01:0,3,42	0/0:17,1:14:11.59:0,12,178	./.	1/1:3,0:3:0.47:1,0,0	0/0:38,0:38:44.87:0,45,842	./.	0/0:5,0:3:9.03:0,9,121	0/1:12,0:12:43.18:43,0,189	0/1:8,0:8:4.78:5,0,191
chr10	19676221	.	A	AGGAG	1231.42	PASS	AB=0.951;AC=12;AF=0.250;AN=48;BaseQRankSum=7.494;DP=378;FS=14.738;HRun=0;HaplotypeScore=74.6716;InbreedingCoeff=-0.1652;MQ=47.79;MQ0=6;MQRankSum=-5.570;QD=7.16;ReadPosRankSum=0.570;VQSLOD=0.9640;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:6:0,6,84	./.	0/0:11,0:6:12.01:0,12,186	0/0:32,0:16:39.04:0,39,656	./.	0/0:10,0:8:6.02:0,6,122	0/0:39,0:38:39.95:0,40,1146	0/0:6,0:5:14.84:0,15,126	0/0:7,0:7:18.01:0,18,323	0/0:5,0:5:15.05:0,15,257	1/1:2,0:2:0.47:1,0,0	0/1:22,0:23:47.78:48,0,476	0/1:23,0:23:57.81:58,0,393	0/1:24,2:26:99:434,0,697	0/1:17,1:19:99:207,0,369	0/1:20,1:21:99:112,0,592	0/1:22,0:22:99:180,0,615	0/1:9,2:13:99:305,0,396	0/0:5,0:5:15.05:0,15,254	0/0:4,0:3:3.01:0,3,57	0/0:15,0:14:11.74:0,12,205	./.	0/1:3,0:3:0:0,0,0	0/0:41,0:41:44.86:0,45,943	./.	0/0:5,0:4:9.01:0,9,155	0/1:12,0:12:7.48:7,0,363	0/1:8,0:8:4.65:5,0,286
chr10	19676228	.	G	GAGCAGCAGC	3039.29	PASS	AB=0.886;AC=23;AF=0.479;AN=48;BaseQRankSum=1.919;DP=409;FS=8.268;HRun=0;HaplotypeScore=96.9451;InbreedingCoeff=0.6715;MQ=48.71;MQ0=4;MQRankSum=-3.699;QD=12.66;ReadPosRankSum=1.463;VQSLOD=1.5250;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:9.02:0,9,156	0/0:2,0:1:3:0,3,25	0/0:17,0:7:8.98:0,9,107	0/0:37,0:19:30.03:0,30,508	./.	0/0:12,0:10:17.55:0,18,185	0/0:35,0:39:62.99:0,63,1361	0/0:7,0:6:5.99:0,6,129	0/0:8,0:8:21.05:0,21,485	1/1:6,0:6:1.25:3,1,0	0/0:2,0:2:0:0,0,0	1/1:12,13:28:3.19:135,3,0	1/1:11,12:24:3.01:117,3,0	1/1:26,0:26:39:1079,39,0	1/1:19,0:19:15.04:367,15,0	1/1:11,10:23:6.49:252,6,0	1/1:25,0:25:15.05:477,15,0	1/1:14,0:14:21.04:687,21,0	1/1:7,0:7:3:27,3,0	./.	1/1:15,0:14:6.29:51,6,0	./.	0/1:3,0:3:0:0,0,0	0/1:21,21:44:0:0,0,0	./.	0/1:6,0:5:0:0,0,0	0/0:12,0:12:21.07:0,21,566	0/0:8,0:8:18.03:0,18,380
chr10	19676565	.	TC	T	4446.30	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=5.749;DP=411;FS=1.306;HRun=7;HaplotypeScore=48.2474;InbreedingCoeff=0.9859;MQ=84.19;MQ0=0;MQRankSum=0.976;QD=24.30;ReadPosRankSum=0.941;VQSLOD=5.0361;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,27:30:60.14:612,60,0	1/1:0,5:5:15.03:153,15,0	0/0:16,0:15:32.57:0,33,365	0/0:19,0:19:24.05:0,24,279	1/1:2,10:12:21.05:214,21,0	1/1:2,22:24:63.14:643,63,0	1/1:3,18:21:48.10:487,48,0	1/1:6,17:23:63.10:632,63,0	1/1:0,8:8:21.05:214,21,0	0/0:11,0:11:27.09:0,27,335	0/0:13,0:13:30.09:0,30,371	0/0:11,0:11:33.11:0,33,412	0/0:14,0:14:36.11:0,36,452	0/0:13,0:13:30.10:0,30,377	0/0:7,0:7:18.06:0,18,226	0/0:8,0:8:21.07:0,21,264	0/0:26,0:26:63.19:0,63,779	0/0:21,0:21:54.17:0,54,676	0/0:6,0:6:18.06:0,18,226	0/0:9,0:9:24.08:0,24,302	0/0:14,0:14:36.12:0,36,453	0/0:5,0:5:12.04:0,12,150	0/0:5,0:5:15.05:0,15,188	0/0:30,0:30:81.24:0,81,994	1/1:2,12:14:30.06:306,30,0	1/1:2,17:19:47.46:481,47,0	1/1:0,16:16:39.09:398,39,0	1/1:0,11:11:30.07:306,30,0
chr10	19677117	.	CT	C	1479.30	PASS	AB=0.739;AC=19;AF=0.339;AN=56;BaseQRankSum=7.501;DP=630;FS=27.270;HRun=14;HaplotypeScore=70.8903;InbreedingCoeff=0.3441;MQ=62.18;MQ0=6;MQRankSum=1.649;QD=4.82;ReadPosRankSum=2.960;VQSLOD=0.4468;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:22,13:35:54.44:186,0,54	1/1:3,3:6:5.58:41,6,0	0/0:33,0:12:8.15:0,8,52	0/1:42,0:19:1.68:2,0,20	0/1:10,12:22:22.50:149,0,22	0/1:6,11:19:22.59:142,0,23	1/1:8,19:28:18.28:265,18,0	0/1:9,8:16:9.95:83,0,10	0/1:11,3:15:2.44:85,0,2	0/0:23,0:22:36.38:0,36,306	0/1:21,3:22:24.74:25,0,208	0/0:27,1:30:33.07:0,33,386	0/0:15,0:15:14.98:0,15,128	0/0:21,0:22:35.65:0,36,274	1/1:7,12:20:17.69:123,18,0	0/0:15,1:16:9.44:0,9,227	0/0:29,3:31:21.85:0,22,464	0/0:33,1:35:48.22:0,48,547	0/0:16,0:15:29.03:0,29,283	0/0:12,0:12:15.38:0,15,119	0/0:26,1:28:51.21:0,51,436	0/0:24,3:28:11:0,11,347	0/0:9,0:9:14.85:0,15,126	0/0:17,2:20:17.50:0,17,325	0/1:7,12:20:2.08:124,0,2	1/1:11,17:30:18.84:254,19,0	1/1:8,15:24:25.39:169,25,0	0/1:3,2:5:13.85:15,0,14
chr10	19677961	.	TG	T	923.62	PASS	AB=0.944;AC=22;AF=0.423;AN=52;BaseQRankSum=2.188;DP=200;FS=0.000;HRun=8;HaplotypeScore=49.1211;InbreedingCoeff=0.6128;MQ=90.61;MQ0=2;MQRankSum=-3.092;QD=9.42;ReadPosRankSum=0.947;VQSLOD=0.9763;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,7:13:20.99:191,21,0	1/1:0,1:1:3:29,3,0	0/0:22,0:13:23.03:0,23,215	0/1:24,0:18:9.68:10,0,185	1/1:4,3:7:9.48:87,9,0	1/1:1,2:3:6.01:58,6,0	1/1:1,19:20:42.05:398,42,0	1/1:4,0:5:2.03:6,2,0	1/1:4,0:4:3:28,3,0	0/0:2,0:2:6.02:0,6,72	0/0:2,0:2:3.01:0,3,36	0/0:7,0:7:17.95:0,18,172	0/0:3,0:3:9.03:0,9,109	0/0:7,0:7:15.03:0,15,169	0/1:7,1:8:4.82:5,0,226	0/0:9,0:9:24.05:0,24,269	0/0:3,0:3:3.01:0,3,36	0/0:4,0:4:9.03:0,9,107	0/0:3,0:3:9.03:0,9,109	./.	0/0:16,0:16:18.03:0,18,202	0/0:4,0:4:4.83:0,5,41	0/0:8,0:8:14.06:0,14,179	0/0:11,0:11:14.77:0,15,181	1/1:0,2:2:6.01:58,6,0	1/1:1,4:5:12.01:116,12,0	1/1:1,5:6:12.02:116,12,0	./.
chr10	19678448	.	G	GC	847.21	PASS	AB=0.590;AC=18;AF=0.346;AN=52;BaseQRankSum=2.751;DP=221;FS=2.073;HRun=9;HaplotypeScore=29.0335;InbreedingCoeff=0.7879;MQ=87.72;MQ0=0;MQRankSum=-0.967;QD=11.61;ReadPosRankSum=-0.923;VQSLOD=1.4353;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,1:9:17.64:104,18,0	./.	0/0:12,0:12:16.91:0,17,123	0/0:13,0:12:14.91:0,15,121	1/1:2,0:6:11.36:56,11,0	0/1:2,8:10:1.99:208,0,2	0/1:4,6:10:4.71:178,0,5	1/1:8,0:8:5.84:35,6,0	1/1:0,3:3:8.96:84,9,0	0/0:7,0:7:20.99:0,21,181	0/0:8,0:8:24:0,24,208	0/0:11,0:11:26.98:0,27,234	0/0:7,0:7:17.99:0,18,156	0/0:7,0:7:21:0,21,182	1/1:1,8:9:18.05:199,18,0	0/0:13,0:13:35.99:0,36,312	0/0:11,0:11:29.99:0,30,260	0/0:10,0:10:26.98:0,27,234	0/0:9,0:9:23.93:0,24,197	0/0:11,0:11:26.97:0,27,233	0/0:9,0:9:23.99:0,24,207	0/0:9,0:9:23.98:0,24,205	0/0:4,0:4:12:0,12,104	0/0:4,0:4:9:0,9,78	1/1:0,0:4:5.68:29,6,0	1/1:2,0:7:17.54:113,18,0	1/1:2,0:7:5.68:28,6,0	./.
chr10	19678690	.	GA	G	4322.09	PASS	AB=0.918;AC=24;AF=0.429;AN=56;BaseQRankSum=13.853;DP=491;FS=5.106;HRun=10;HaplotypeScore=73.6220;InbreedingCoeff=0.8703;MQ=86.37;MQ0=0;MQRankSum=-0.350;QD=18.87;ReadPosRankSum=-1.390;VQSLOD=5.1211;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:3,25:28:68.98:599,69,0	1/1:0,4:4:12:104,12,0	0/1:23,1:22:5.20:5,0,197	0/0:35,0:31:32.83:0,33,312	1/1:2,24:26:65.98:573,66,0	1/1:3,15:18:44.98:391,45,0	1/1:2,17:19:47.99:417,48,0	1/1:3,24:27:71.92:612,72,0	1/1:1,19:20:44.99:391,45,0	0/0:19,0:19:48.11:0,48,515	0/1:6,1:7:8.01:8,0,148	0/0:21,0:21:57.13:0,57,609	0/0:16,0:16:42.11:0,42,465	0/0:18,0:18:48.11:0,48,518	0/0:12,0:12:27.07:0,27,299	0/0:17,0:18:50.97:0,51,545	0/0:26,0:26:69.19:0,69,762	0/0:22,0:22:43.33:0,43,634	0/0:17,0:17:42.10:0,42,451	0/0:12,0:12:30.05:0,30,315	0/0:13,0:13:30.08:0,30,332	0/0:14,0:14:36.10:0,36,398	0/0:5,0:5:12.03:0,12,133	0/0:14,0:14:42.09:0,42,455	1/1:1,6:7:17.99:156,18,0	1/1:3,13:16:38.99:339,39,0	1/1:2,19:21:53.98:469,54,0	1/1:0,11:11:29.99:260,30,0
chr10	19679948	.	TA	T	1067.05	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.551;DP=652;FS=3.312;HRun=3;HaplotypeScore=59.4982;InbreedingCoeff=0.9910;MQ=85.42;MQ0=0;MQRankSum=-0.958;QD=31.38;ReadPosRankSum=-4.538;VQSLOD=1.6685;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,114,1594	0/0:6,0:6:18.06:0,18,259	0/0:25,0:25:72.24:0,72,1037	0/0:23,0:23:60.12:0,60,800	0/0:33,0:33:96.31:0,96,1366	0/0:31,0:31:90.29:0,90,1280	0/0:20,0:20:60.20:0,60,864	1/1:2,32:34:96.27:1162,96,0	0/0:21,0:21:63.21:0,63,907	0/0:22,0:22:60.20:0,60,849	0/0:24,0:24:69.23:0,69,992	0/0:22,0:22:63.16:0,63,850	0/0:23,0:23:69.21:0,69,959	0/0:15,0:15:45.15:0,45,647	0/0:22,0:22:60.19:0,60,845	0/0:10,0:10:27.09:0,27,389	0/0:27,0:27:75.15:0,75,1009	0/0:23,0:23:60.20:0,60,863	0/0:19,0:19:54.18:0,54,763	0/0:30,0:30:90.30:0,90,1296	0/0:27,0:27:75.21:0,75,1039	0/0:20,0:20:60.19:0,60,847	0/0:19,0:19:54.17:0,54,761	0/0:19,0:19:57.19:0,57,821	0/0:28,0:28:84.28:0,84,1209	0/0:17,0:17:48.15:0,48,676	0/0:39,0:39:99:0,114,1636	0/0:14,0:14:39.13:0,39,562
chr10	19682972	.	TCGGAAATTTACTACACTTGATCTTAGCCAAAAGGCCGAGAAG	T	21237.32	PASS	AC=50;AF=0.926;AN=54;BaseQRankSum=7.259;DP=512;FS=9.817;HRun=0;HaplotypeScore=505.5424;InbreedingCoeff=0.4417;MQ=77.70;MQ0=0;MQRankSum=-7.701;QD=46.99;ReadPosRankSum=6.598;VQSLOD=1.1014;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:14,13:27:10.19:1075,10,0	./.	0/0:25,0:25:60.20:0,60,3429	0/0:29,0:28:66.15:0,66,3984	1/1:14,12:26:35.92:1939,36,0	1/1:8,5:13:9.03:953,9,0	1/1:18,0:18:12.01:155,12,0	1/1:19,0:18:5.99:76,6,0	1/1:15,5:20:6.02:635,6,0	1/1:16,8:24:24.06:1738,24,0	1/1:10,2:12:3.01:257,3,0	1/1:18,12:30:15.05:1580,15,0	1/1:15,5:20:6.02:627,6,0	1/1:11,7:18:15.05:1589,15,0	1/1:14,13:27:20.96:2175,21,0	1/1:18,4:22:9.03:944,9,0	1/1:13,0:13:4.15:108,4,0	1/1:8,0:8:3.01:39,3,0	1/1:12,0:12:3.01:55,3,0	1/1:12,7:19:21.07:1413,21,0	1/1:11,1:12:3.01:236,3,0	1/1:11,5:16:6.02:635,6,0	1/1:11,4:15:8.58:768,9,0	1/1:13,1:14:5.93:343,6,0	1/1:14,10:24:15.05:1589,15,0	1/1:16,7:23:18:1046,18,0	1/1:9,4:13:9.03:945,9,0	1/1:5,2:7:3.01:318,3,0
chr10	19685704	.	G	GA	773.73	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-6.582;DP=649;FS=2.502;HRun=7;HaplotypeScore=66.7520;InbreedingCoeff=0.9967;MQ=81.26;MQ0=0;MQRankSum=-0.696;QD=27.63;ReadPosRankSum=-3.976;VQSLOD=2.7187;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:30:58.73:0,59,725	0/0:11,0:11:30.04:0,30,290	0/0:19,0:19:42.68:0,43,431	0/0:27,0:27:56.75:0,57,590	0/0:24,0:24:72.12:0,72,695	0/0:30,0:30:90.15:0,90,869	0/0:13,0:13:33.05:0,33,319	1/1:3,25:28:72.22:869,72,0	0/0:23,0:23:59.90:0,60,579	0/0:31,0:31:84.12:0,84,805	0/0:14,0:14:36.06:0,36,348	0/0:18,0:18:48.05:0,48,457	0/0:26,0:26:66.07:0,66,626	0/0:25,0:25:66.10:0,66,637	0/0:36,0:36:93.13:0,93,893	0/0:30,0:30:84.11:0,84,800	0/0:38,0:38:99:0,99,948	0/0:19,0:19:41.90:0,42,384	0/0:18,0:18:38.89:0,39,362	0/0:23,2:25:23.84:0,24,509	0/0:19,0:19:57.09:0,57,550	0/0:15,0:15:39.06:0,39,376	0/0:18,0:18:42.06:0,42,406	0/0:20,0:20:57.06:0,57,542	0/0:21,0:21:60.10:0,60,579	0/0:22,0:22:63.10:0,63,608	0/0:33,0:33:89.18:0,89,866	0/0:16,0:16:48.08:0,48,463
chr10	19685888	.	TTG	T	688.43	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.932;DP=691;FS=10.026;HRun=0;HaplotypeScore=77.8231;InbreedingCoeff=0.9997;MQ=79.75;MQ0=0;MQRankSum=0.906;QD=28.68;ReadPosRankSum=-3.454;VQSLOD=3.6725;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:60.17:0,60,1005	0/0:14,0:14:42.13:0,42,712	0/0:14,0:14:36.12:0,36,629	0/0:20,0:20:39.13:0,39,662	0/0:39,0:39:99:0,105,1824	0/0:33,0:33:99:0,99,1727	0/0:18,0:18:48.16:0,48,852	1/1:5,19:24:57.19:783,57,0	0/0:25,0:25:72.21:0,72,1219	0/0:29,0:29:84.29:0,84,1485	0/0:22,0:22:66.23:0,66,1163	0/0:26,0:26:75.24:0,75,1290	0/0:28,0:28:66.21:0,66,1142	0/0:29,0:29:84.29:0,84,1490	0/0:25,0:25:69.23:0,69,1204	0/0:18,0:18:51.17:0,51,899	0/0:32,0:32:90.31:0,90,1588	0/0:27,0:27:66.23:0,66,1145	0/0:16,0:15:42.14:0,42,738	0/0:31,0:31:84.26:0,84,1459	0/0:18,0:18:48.14:0,48,820	0/0:16,0:16:45.15:0,45,798	0/0:27,0:27:69.22:0,69,1190	0/0:18,0:18:54.18:0,54,947	0/0:17,0:17:51.16:0,51,869	0/0:34,0:34:99:0,99,1726	0/0:40,0:40:99:0,114,1985	0/0:27,0:27:81.28:0,81,1424
chr10	19688102	.	G	GA	4935.06	PASS	AB=0.944;AC=24;AF=0.429;AN=56;BaseQRankSum=-0.978;DP=477;FS=1.228;HRun=10;HaplotypeScore=57.3208;InbreedingCoeff=0.8440;MQ=69.53;MQ0=0;MQRankSum=-1.143;QD=19.98;ReadPosRankSum=-0.301;VQSLOD=5.4218;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,35:37:68.60:933,69,0	1/1:1,9:10:24.06:256,24,0	0/1:8,0:10:10.61:11,0,82	0/0:10,0:9:12.43:0,12,99	1/1:2,13:16:35.92:366,36,0	1/1:3,23:27:50.96:526,51,0	1/1:2,18:20:51.13:544,51,0	1/1:7,3:29:63.78:370,64,0	1/1:5,16:21:36.09:384,36,0	0/0:19,0:19:47.91:0,48,392	0/0:12,0:12:22.50:0,22,208	0/0:13,0:13:26.92:0,27,222	0/0:14,0:14:29.90:0,30,240	0/0:6,0:6:11.97:0,12,99	0/0:15,0:16:37.99:0,38,301	0/0:16,0:16:41.94:0,42,342	0/0:32,4:36:28.95:0,29,650	0/0:20,0:20:50.92:0,51,419	0/0:18,1:19:21.93:0,22,380	0/0:14,0:15:34.97:0,35,277	0/1:7,1:8:11.01:11,0,127	0/0:13,0:13:29.95:0,30,243	0/0:12,0:12:32.94:0,33,268	0/0:9,0:9:17.96:0,18,148	1/1:4,13:17:11.55:327,12,0	1/1:5,19:24:60.13:629,60,0	1/1:1,14:16:11.24:309,11,0	1/1:2,10:12:26.86:269,27,0
chr10	19689353	.	TA	T	4196.99	PASS	AB=0.854;AC=51;AF=0.944;AN=54;BaseQRankSum=-3.040;DP=468;FS=3.522;HRun=13;HaplotypeScore=70.3628;InbreedingCoeff=-0.0446;MQ=75.41;MQ0=8;MQRankSum=-0.322;QD=9.05;ReadPosRankSum=3.183;VQSLOD=3.1474;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,0:22:36.66:107,37,0	1/1:1,0:5:8.15:24,8,0	0/1:46,0:24:15.30:15,0,149	0/1:25,0:13:14.26:14,0,20	1/1:5,0:23:29.56:85,30,0	1/1:2,0:18:30.55:90,31,0	1/1:0,0:5:8.15:24,8,0	1/1:11,14:27:18.19:301,18,0	1/1:2,0:8:12.22:36,12,0	1/1:10,15:25:23.53:324,24,0	1/1:5,14:20:17.58:282,18,0	1/1:0,10:10:23.86:175,24,0	1/1:3,2:5:8.95:65,9,0	1/1:2,11:13:3.85:190,4,0	1/1:4,14:18:41.62:300,42,0	1/1:1,12:13:32.81:241,33,0	1/1:5,23:28:66.41:500,66,0	1/1:5,12:17:37.78:267,38,0	1/1:9,7:16:3.32:175,3,0	1/1:5,12:18:34.83:247,35,0	1/1:2,4:6:11.90:88,12,0	./.	0/1:2,7:9:8.30:110,0,8	1/1:0,7:7:20.88:153,21,0	1/1:1,0:19:30.55:89,31,0	1/1:2,0:26:47.67:146,48,0	1/1:1,0:24:44.81:132,45,0	1/1:3,0:9:6.10:18,6,0
chr10	19689848	.	CT	C	17885.30	PASS	AC=52;AF=1.000;AN=52;BaseQRankSum=-1.732;DP=634;FS=3.028;HRun=3;HaplotypeScore=388.8438;InbreedingCoeff=-0.0018;MQ=30.33;MQ0=1;MQRankSum=1.034;QD=28.48;ReadPosRankSum=1.481;VQSLOD=2.5105;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,39:42:99:1193,102,0	1/1:0,13:13:39.08:465,39,0	./.	./.	1/1:1,30:31:66.21:815,66,0	1/1:2,19:21:45.07:537,45,0	1/1:1,29:29:51.09:612,51,0	1/1:5,21:21:48.15:592,48,0	1/1:1,23:24:69.13:819,69,0	1/1:4,35:37:99:1204,99,0	1/1:2,14:15:30.04:343,30,0	1/1:2,27:29:81.25:1002,81,0	1/1:1,26:27:72.17:871,72,0	1/1:3,33:36:99:1172,99,0	1/1:2,25:27:78.14:917,78,0	1/1:1,28:29:81.20:984,81,0	1/1:1,18:19:42.54:501,43,0	1/1:3,10:13:12.44:282,12,0	1/1:2,23:23:63.20:780,63,0	1/1:1,18:19:39.12:482,39,0	1/1:1,20:21:17.53:202,18,0	1/1:3,19:22:51.15:619,51,0	1/1:0,22:22:45.14:556,45,0	1/1:0,13:13:17.99:200,18,0	1/1:0,15:15:39.12:482,39,0	1/1:1,26:26:75.23:916,75,0	1/1:3,31:34:87.18:1041,87,0	1/1:0,8:8:24.08:297,24,0
chr10	19692470	.	A	AATATAT	1304.01	PASS	AB=0.558;AC=9;AF=0.173;AN=52;BaseQRankSum=-6.339;DP=393;FS=4.534;HRun=0;HaplotypeScore=115.1635;InbreedingCoeff=0.2758;MQ=82.34;MQ0=8;MQRankSum=-1.007;QD=10.87;ReadPosRankSum=-6.661;VQSLOD=0.0206;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:20:3.06:0,3,11	0/0:2,0:10:2.53:0,3,7	0/0:23,0:13:9.49:0,9,122	0/0:32,0:21:9.81:0,10,168	0/0:4,0:18:9.03:0,9,33	0/0:1,0:14:7.98:0,8,28	0/0:3,0:9:1.41:0,1,4	1/1:11,17:29:57.17:1181,57,0	0/0:3,0:11:2.36:0,2,6	0/0:4,0:16:6.05:0,6,76	0/0:2,0:9:2.79:0,3,8	0/0:0,0:11:3.30:0,3,9	0/0:2,0:6:0.71:0,1,2	0/1:3,0:13:0.98:1,0,3	0/0:1,0:5:0.94:0,1,3	0/0:1,0:9:2.83:0,3,8	0/0:4,0:23:7.54:0,8,21	0/1:4,0:16:6.28:33,0,6	0/1:3,0:12:2.75:39,0,3	1/1:4,0:13:1.10:58,1,0	./.	./.	0/0:6,0:7:0.47:0,0,1	0/0:1,0:4:1.41:0,1,4	0/0:3,0:24:5.67:0,6,18	0/1:2,0:19:2.32:89,0,2	0/0:2,0:15:4.96:0,5,14	0/1:3,0:15:4.51:22,0,5
chr10	19693050	.	AACAC	A	2843.48	PASS	AB=0.827;AC=31;AF=0.620;AN=50;BaseQRankSum=-3.297;DP=553;FS=3.193;HRun=0;HaplotypeScore=133.9958;InbreedingCoeff=0.5027;MQ=66.97;MQ0=4;MQRankSum=2.773;QD=8.03;ReadPosRankSum=2.803;VQSLOD=2.7507;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:9,24:34:15.05:244,15,0	1/1:3,10:13:3.01:42,3,0	0/0:32,0:19:23.99:0,24,289	0/0:37,0:28:27.73:0,28,298	1/1:4,19:23:6.02:99,6,0	1/1:8,15:23:17.96:298,18,0	1/1:2,17:19:12.04:199,12,0	0/1:17,16:34:99:493,0,223	1/1:3,9:13:6.01:78,6,0	0/1:16,0:17:2.71:3,0,34	./.	0/0:12,0:12:8.94:0,9,66	0/0:18,0:18:22.48:0,22,155	1/1:5,0:16:3:28,3,0	0/0:25,0:25:4.28:0,4,27	1/1:2,0:14:6.01:56,6,0	0/0:15,0:15:18.75:0,19,122	0/1:2,0:21:8.92:22,0,9	0/0:16,0:15:1.87:0,2,117	./.	0/1:15,0:15:0:0,0,0	1/1:7,0:21:3:28,3,0	./.	0/1:16,0:16:0:1,0,0	1/1:0,18:18:6.02:99,6,0	1/1:7,21:28:43.15:919,43,0	1/1:10,7:17:11.77:139,12,0	1/1:2,9:11:18.03:260,18,0
chr10	19693063	.	ACACACACACACG	A	2924.13	PASS	AB=1.000;AC=22;AF=0.440;AN=50;BaseQRankSum=-2.693;DP=496;FS=22.816;HRun=0;HaplotypeScore=162.5819;InbreedingCoeff=0.6462;MQ=51.95;MQ0=9;MQRankSum=-1.915;QD=17.00;ReadPosRankSum=3.300;VQSLOD=1.3601;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:13.29:0,13,290	0/1:12,0:12:17.94:74,0,18	0/0:25,0:11:23.95:0,24,341	0/0:24,0:16:38.11:0,38,535	0/0:23,0:22:9.01:0,9,168	0/0:24,0:24:42.05:0,42,870	0/0:24,0:23:26.81:0,27,674	0/0:38,0:35:87.25:0,87,1383	0/0:15,0:15:15.03:0,15,270	1/1:4,10:13:17.95:332,18,0	./.	1/1:11,0:11:8.99:164,9,0	1/1:16,0:16:33.01:615,33,0	1/1:12,0:12:3.01:87,3,0	1/1:20,0:20:17.81:359,18,0	1/1:12,0:12:6.02:174,6,0	1/1:15,0:15:26.86:514,27,0	1/1:20,0:20:6.02:167,6,0	1/1:5,8:11:13.02:414,13,0	./.	0/0:13,0:12:2.80:0,3,54	1/1:16,0:16:3.01:87,3,0	./.	0/0:11,0:11:2.57:0,3,21	0/0:18,0:18:6.02:0,6,149	0/0:25,0:25:51.83:0,52,1155	0/0:13,0:13:17.76:0,18,209	0/1:11,0:11:99:120,0,192
chr10	19694052	.	T	TA	154.92	PASS	AB=0.914;AC=5;AF=0.089;AN=56;BaseQRankSum=-0.326;DP=655;FS=1.489;HRun=13;HaplotypeScore=144.2783;InbreedingCoeff=0.2815;MQ=67.97;MQ0=0;MQRankSum=1.181;QD=1.89;ReadPosRankSum=-1.970;VQSLOD=0.3929;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:28:35.51:0,36,306	0/0:7,0:7:17.79:0,18,119	0/0:26,0:22:4.53:0,5,69	0/0:24,0:17:0.46:0,0,89	0/0:35,0:35:46.86:0,47,417	0/0:20,0:20:43.90:0,44,280	0/0:20,0:20:25.61:0,26,221	1/1:10,9:19:26.88:231,27,0	0/0:18,0:19:38.77:0,39,244	0/0:21,0:22:46.49:0,46,312	0/1:24,3:28:26.57:27,0,252	0/1:19,2:21:1.48:1,0,268	0/0:10,3:14:3.79:0,4,146	0/0:17,0:17:37.65:0,38,239	0/0:28,2:31:18.97:0,19,397	0/0:30,1:31:76.46:0,76,530	0/0:21,0:22:52.43:0,52,349	0/0:30,1:32:42.71:0,43,422	0/0:26,0:26:46.50:0,46,301	0/0:40,0:41:55.47:0,55,507	0/0:16,0:17:13.07:0,13,153	0/0:22,0:24:48.57:0,49,317	0/0:24,0:25:58.39:0,58,391	0/0:13,0:13:32.67:0,33,225	0/0:20,0:22:40.60:0,41,265	0/0:24,1:25:4.22:0,4,227	0/0:31,0:32:72.06:0,72,455	0/1:11,0:12:3.19:3,0,90
chr10	19694072	.	CA	C	4698.31	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=4.699;DP=669;FS=11.582;HRun=6;HaplotypeScore=126.8624;InbreedingCoeff=0.9958;MQ=76.29;MQ0=1;MQRankSum=-2.145;QD=20.88;ReadPosRankSum=3.420;VQSLOD=3.4613;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,36:38:72.18:764,72,0	1/1:1,7:8:21.05:224,21,0	0/0:31,0:24:30.69:0,31,485	0/0:26,0:22:15.76:0,16,300	1/1:8,30:38:87.04:883,87,0	1/1:1,18:19:36.09:385,36,0	1/1:3,12:15:29.99:307,30,0	0/0:27,0:26:66.15:0,66,831	1/1:6,15:21:26.39:285,26,0	0/0:25,0:25:69.22:0,69,894	0/0:28,0:28:78.22:0,78,1004	0/0:21,0:20:48.11:0,48,612	0/0:18,0:18:42.14:0,42,546	0/0:17,0:17:42.14:0,42,552	0/0:34,0:34:97.54:0,98,1250	0/0:32,0:32:58.41:0,58,1086	0/0:22,0:22:60.20:0,60,789	0/0:27,0:27:69.04:0,69,868	0/0:19,0:19:51.07:0,51,616	0/0:39,0:39:96.30:0,96,1245	0/0:15,0:15:39.12:0,39,499	0/0:24,0:24:72.22:0,72,932	0/0:25,0:25:72.15:0,72,886	0/0:14,0:14:33.09:0,33,407	1/1:1,19:20:36.09:383,36,0	1/1:7,16:23:21.16:541,21,0	1/1:5,27:32:66.14:703,66,0	1/1:0,11:11:21.05:223,21,0
chr10	19697078	.	C	CAG	22306.03	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-2.179;DP=805;FS=17.053;HRun=0;HaplotypeScore=125.6957;InbreedingCoeff=0.8882;MQ=73.17;MQ0=4;MQRankSum=-6.218;QD=30.56;ReadPosRankSum=5.944;VQSLOD=5.4287;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,45:54:73.55:1757,74,0	1/1:2,12:15:27.09:449,27,0	0/0:35,0:27:41.49:0,41,486	0/0:40,0:32:41.95:0,42,670	1/1:7,28:34:19.38:859,19,0	1/1:3,15:18:33.11:547,33,0	1/1:9,19:29:1.31:536,1,0	1/1:9,30:40:96.06:1440,96,0	1/1:7,19:27:48.16:798,48,0	1/1:8,25:33:75.24:1202,75,0	1/1:4,19:23:54.18:892,54,0	1/1:2,17:19:42.14:698,42,0	1/1:6,15:21:42.60:667,43,0	1/1:10,23:33:60.21:997,60,0	1/1:5,31:36:66.23:1097,66,0	1/1:5,23:29:54.18:897,54,0	1/1:5,28:33:57.19:947,57,0	1/1:2,8:10:18.06:295,18,0	1/1:8,12:20:39.04:539,39,0	1/1:4,16:20:39.13:648,39,0	1/1:13,44:57:99:1745,105,0	1/1:6,14:20:33.11:546,33,0	1/1:6,22:28:41.96:698,42,0	1/1:9,21:30:48.16:798,48,0	1/1:3,14:17:42.14:698,42,0	1/1:6,22:28:31.37:1051,31,0	1/1:9,31:40:30.90:1058,31,0	1/1:3,10:13:27.09:449,27,0
chr10	19698828	.	A	AGTGTGTGTGTGTGTGTGTGTGTGT	41088.03	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-0.625;DP=622;FS=2.088;HRun=0;HaplotypeScore=373.0466;InbreedingCoeff=0.8625;MQ=54.39;MQ0=3;MQRankSum=-4.411;QD=72.85;ReadPosRankSum=3.873;VQSLOD=3.4764;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:23:12.35:374,12,0	1/1:13,0:13:12.03:655,12,0	0/0:32,0:22:37.68:0,38,1604	0/0:26,0:20:12.04:0,12,358	1/1:34,0:32:23.14:1375,23,0	1/1:28,4:33:33.11:3210,33,0	1/1:22,0:21:17.60:1030,18,0	1/1:32,0:30:54.19:2426,54,0	1/1:13,0:12:18.06:1179,18,0	1/1:23,0:26:69.24:3606,69,0	1/1:15,0:21:20.18:1103,20,0	1/1:29,0:41:39.38:2028,39,0	1/1:16,0:21:30.57:1435,31,0	1/1:19,0:23:20.76:884,21,0	1/1:23,0:27:27.09:1393,27,0	1/1:18,0:22:36.12:1724,36,0	1/1:14,0:17:30.10:1406,30,0	1/1:13,0:16:21.07:1226,21,0	1/1:22,0:22:47.16:1871,47,0	1/1:16,0:18:21.07:1089,21,0	1/1:9,0:11:15.52:768,16,0	1/1:17,0:17:12.04:645,12,0	1/1:11,0:15:15.52:822,16,0	1/1:17,0:17:12:539,12,0	1/1:14,0:14:9.03:940,9,0	1/1:22,0:22:35.79:2794,36,0	1/1:30,0:30:66.67:5420,67,0	1/1:7,0:7:15.05:1145,15,0
chr10	19703735	.	G	GTTCATACCTGT	28544.05	PASS	AB=0.583;AC=19;AF=0.339;AN=56;BaseQRankSum=-9.462;DP=768;FS=5.325;HRun=0;HaplotypeScore=208.8587;InbreedingCoeff=0.9195;MQ=78.98;MQ0=0;MQRankSum=-18.246;QD=101.94;ReadPosRankSum=1.429;VQSLOD=4.6578;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,13:36:54.19:2583,54,0	1/1:4,8:12:30.10:1668,30,0	0/0:20,0:20:38.34:0,38,1088	0/0:23,0:23:30.16:0,30,1052	1/1:8,17:32:60.21:3079,60,0	1/1:7,11:21:51.18:2726,51,0	1/1:9,12:35:54.19:2778,54,0	0/0:22,0:22:51.18:0,51,1753	1/1:9,22:36:84.29:4459,84,0	0/0:41,0:41:99:0,111,3697	0/0:21,0:21:60.21:0,60,2069	0/0:41,0:41:99:0,117,3892	0/0:32,0:32:90.31:0,90,3109	0/0:31,0:31:90.28:0,90,2895	0/0:33,0:33:93.32:0,93,3099	0/0:35,0:35:99:0,105,3484	0/0:24,0:24:72.23:0,72,2413	0/0:21,0:21:57.17:0,57,1830	0/0:20,0:21:51.14:0,51,1487	0/0:24,0:24:69.22:0,69,2258	0/0:22,0:22:57.17:0,57,1832	0/0:31,0:31:81.27:0,81,2628	0/0:25,0:25:69.22:0,69,2243	0/0:21,0:21:60.19:0,60,1956	1/1:7,14:33:51.17:2695,51,0	0/1:8,11:28:99:2943,0,133	1/1:8,20:36:81.08:4476,81,0	1/1:3,4:10:21.07:1138,21,0
chr10	19704707	.	C	CTTTCTTTTTTTT	11273.72	PASS	AB=1.000;AC=30;AF=0.536;AN=56;BaseQRankSum=3.726;DP=573;FS=24.184;HRun=0;HaplotypeScore=209.8782;InbreedingCoeff=0.6972;MQ=66.69;MQ0=6;MQRankSum=-8.173;QD=35.90;ReadPosRankSum=-8.010;VQSLOD=1.2359;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:38:43.21:0,43,858	0/0:9,0:9:4.25:0,4,60	0/0:31,0:18:1.09:0,1,33	0/1:20,0:15:2.49:2,0,27	0/0:18,0:19:11.15:0,11,256	0/0:14,0:14:11.95:0,12,212	0/0:23,0:23:24.07:0,24,490	0/0:28,0:28:10.21:0,10,307	0/0:23,0:23:3.01:0,3,62	1/1:21,0:21:7.48:807,7,0	1/1:20,0:20:9.21:1402,9,0	1/1:17,0:18:21:970,21,0	1/1:19,0:19:19.03:523,19,0	1/1:25,0:25:7.02:549,7,0	1/1:14,0:13:20.93:765,21,0	1/1:14,0:14:21.03:975,21,0	1/1:22,2:23:25.09:1061,25,0	1/1:24,0:23:31.86:1077,32,0	1/1:22,0:22:17.99:354,18,0	1/1:26,2:28:28.06:1483,28,0	1/1:9,0:9:4.21:25,4,0	1/1:18,2:20:19.16:774,19,0	0/1:21,0:21:25.21:417,0,25	1/1:15,0:13:7.24:89,7,0	0/0:11,0:11:4.21:0,4,57	0/0:30,0:29:33.19:0,33,486	0/0:18,0:18:13.26:0,13,262	0/0:13,0:13:11.95:0,12,235
chr10	19704711	.	C	CT	1942.86	PASS	AB=1.000;AC=22;AF=0.393;AN=56;BaseQRankSum=-0.484;DP=594;FS=2.018;HRun=11;HaplotypeScore=78.0393;InbreedingCoeff=0.7524;MQ=63.61;MQ0=17;MQRankSum=4.348;QD=7.09;ReadPosRankSum=2.157;VQSLOD=2.4014;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:19,26:43:24.66:410,25,0	1/1:10,0:10:22.38:172,22,0	0/1:29,0:17:11.18:11,0,39	0/1:19,0:14:12.10:12,0,32	1/1:20,5:24:13.69:302,14,0	1/1:4,13:16:14.39:128,14,0	1/1:3,18:21:26.92:256,27,0	0/0:30,0:29:39.53:0,40,286	1/1:6,19:25:6.01:60,6,0	0/0:20,0:20:43.02:0,43,299	0/0:20,0:20:16.08:0,16,261	0/0:18,0:18:23.89:0,24,235	0/0:18,0:18:31.58:0,32,204	0/0:23,0:25:46.34:0,46,297	0/0:16,0:15:29.18:0,29,212	0/0:13,0:13:34.79:0,35,246	0/0:28,0:24:43.39:0,43,362	0/0:23,0:22:50.74:0,51,383	0/0:20,0:20:35.83:0,36,274	0/0:26,2:28:0.12:0,0,249	0/0:7,0:7:5.59:0,6,46	0/0:19,0:20:24.41:0,24,266	0/0:19,0:20:36.31:0,36,271	0/0:13,0:11:8.56:0,9,69	1/1:10,1:11:14.85:125,15,0	1/1:12,21:32:12.62:412,13,0	1/1:8,14:22:16.69:149,17,0	1/1:5,9:12:6.42:113,6,0
chr10	19704724	.	T	TTTTTTTTTTTC	8927.35	PASS	AB=0.987;AC=19;AF=0.339;AN=56;BaseQRankSum=3.926;DP=582;FS=13.810;HRun=0;HaplotypeScore=185.6117;InbreedingCoeff=-0.3897;MQ=52.24;MQ0=23;MQRankSum=-6.797;QD=25.88;ReadPosRankSum=-1.199;VQSLOD=3.2669;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:43:26.82:0,27,1265	0/0:13,0:12:13.29:0,13,171	0/0:22,0:9:0.90:0,1,37	0/1:13,0:8:1.58:2,0,28	0/0:27,0:26:20.89:0,21,421	0/0:20,0:19:6.12:0,6,353	0/0:22,0:22:11.73:0,12,641	0/0:27,0:26:19.87:0,20,438	0/0:21,0:21:11.94:0,12,141	0/1:16,5:22:20.03:810,0,20	0/1:22,0:21:99:491,0,217	0/1:21,0:20:74.97:834,0,75	0/1:14,0:14:59.37:412,0,59	0/1:22,0:22:37.37:682,0,37	0/1:20,0:18:99:364,0,133	0/1:13,0:13:47.86:537,0,48	0/1:31,0:26:99:1339,0,108	0/1:24,0:21:21.61:784,0,22	0/1:17,0:17:75.59:198,0,76	0/1:26,0:26:99:990,0,108	1/1:4,0:4:6.88:164,7,0	0/1:22,0:22:76.71:728,0,77	0/1:18,0:18:77.33:304,0,77	0/1:14,0:12:16.90:124,0,17	0/1:12,0:12:38.33:38,0,106	0/1:30,0:28:99:126,0,631	0/0:22,0:22:28.08:0,28,365	0/0:17,0:13:15.04:0,15,309
chr10	19705166	.	ATG	A	9448.68	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=16.347;DP=696;FS=3.005;HRun=0;HaplotypeScore=80.9793;InbreedingCoeff=0.9940;MQ=77.18;MQ0=3;MQRankSum=0.370;QD=37.20;ReadPosRankSum=4.097;VQSLOD=7.2698;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,29:29:72.24:1031,72,0	1/1:0,7:7:12.04:172,12,0	0/0:18,0:18:45.15:0,45,818	0/0:12,0:12:30.08:0,30,516	1/1:1,31:31:84.21:1165,84,0	1/1:1,26:26:75.25:1075,75,0	1/1:0,11:11:33.11:473,33,0	0/0:34,0:34:93.32:0,93,1699	1/1:3,18:21:48.16:688,48,0	0/0:29,0:29:87.29:0,87,1557	0/0:34,0:34:99:0,99,1813	0/0:20,0:20:60.19:0,60,1069	0/0:27,0:27:75.26:0,75,1365	0/0:27,0:27:81.28:0,81,1469	0/0:26,0:26:75.26:0,75,1374	0/0:24,1:25:32.28:0,32,1277	0/0:23,0:23:66.20:0,66,1176	0/0:19,0:19:51.14:0,51,872	0/0:25,0:25:72.24:0,72,1291	0/0:43,0:43:99:0,129,2327	0/0:21,0:21:60.18:0,60,1066	0/0:25,0:25:72.25:0,72,1308	0/0:23,0:23:69.22:0,69,1234	0/0:11,0:11:30.10:0,30,550	1/1:3,35:38:96.32:1375,96,0	1/1:2,31:33:38.26:1193,38,0	1/1:1,49:49:99:2019,141,0	1/1:0,6:6:18.06:258,18,0
chr10	19710060	.	C	CTTT	5186.42	PASS	AB=0.540;AC=50;AF=0.893;AN=56;BaseQRankSum=2.050;DP=483;FS=15.070;HRun=10;HaplotypeScore=122.8744;InbreedingCoeff=0.5499;MQ=71.67;MQ0=0;MQRankSum=-3.375;QD=11.42;ReadPosRankSum=1.241;VQSLOD=1.5636;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:5,0:54:50.89:57,0,51	1/1:2,0:9:7.48:17,7,0	0/0:16,0:16:20.57:0,21,217	0/0:13,0:12:14.17:0,14,164	1/1:1,0:16:17.44:40,17,0	1/1:1,0:15:17.44:41,17,0	1/1:6,0:19:12.46:29,12,0	1/1:5,0:27:30.13:116,30,0	1/1:0,0:9:11.21:26,11,0	1/1:12,0:12:13.32:101,13,0	1/1:11,2:13:30.43:355,30,0	1/1:12,1:14:25.97:409,26,0	1/1:10,0:12:19.78:290,20,0	1/1:10,1:14:28.51:441,29,0	1/1:2,9:13:24.08:443,24,0	1/1:12,0:18:23.27:322,23,0	1/1:11,2:30:45.15:664,45,0	1/1:2,4:22:21.52:305,22,0	1/1:4,1:17:27.09:290,27,0	1/1:9,0:10:13.83:171,14,0	1/1:8,10:20:17.42:248,17,0	1/1:6,0:8:11.33:134,11,0	1/1:11,0:13:20.37:180,20,0	1/1:3,5:17:24:342,24,0	0/1:4,0:20:16.99:17,0,19	1/1:3,0:21:25.43:79,25,0	1/1:1,0:19:18.54:43,19,0	1/1:2,0:11:11.21:26,11,0
chr10	19710526	.	CT	C	743.14	PASS	AB=0.800;AC=19;AF=0.339;AN=56;BaseQRankSum=2.936;DP=530;FS=7.511;HRun=16;HaplotypeScore=68.0104;InbreedingCoeff=0.1413;MQ=70.68;MQ0=1;MQRankSum=-0.031;QD=2.85;ReadPosRankSum=4.944;VQSLOD=-0.6808;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:14,8:22:32.20:39,0,32	1/1:6,7:13:14.48:88,14,0	0/0:17,0:14:2.56:0,3,40	0/0:6,0:6:5.75:0,6,52	0/1:14,4:19:50.71:54,0,51	1/1:13,10:24:8.16:159,8,0	0/1:11,8:22:55.02:73,0,55	0/0:31,1:32:1.76:0,2,111	0/1:8,4:13:3.86:73,0,4	0/1:19,2:21:9.40:9,0,142	0/0:15,1:20:1.33:0,1,87	0/0:18,1:19:0.78:0,1,201	0/0:19,1:20:11.98:0,12,163	0/0:19,0:19:31.09:0,31,222	0/0:21,0:23:36:0,36,258	0/0:13,1:20:7.80:0,8,177	0/1:14,3:17:18.11:18,0,175	0/0:15,1:21:29.79:0,30,237	0/0:27,0:26:38.93:0,39,321	0/1:22,2:25:5.71:6,0,102	0/0:9,0:10:14.79:0,15,107	0/0:19,1:21:3.94:0,4,151	0/0:13,1:14:8.92:0,9,174	0/1:5,2:14:23.72:24,0,28	1/1:11,8:20:19.45:113,19,0	0/1:12,8:21:3.62:76,0,4	1/1:10,9:19:0.61:117,1,0	1/1:4,6:11:10.63:60,11,0
chr10	19710740	.	T	TC	11830.54	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-3.967;DP=719;FS=9.439;HRun=6;HaplotypeScore=98.1113;InbreedingCoeff=0.9990;MQ=63.11;MQ0=2;MQRankSum=1.873;QD=31.46;ReadPosRankSum=2.897;VQSLOD=4.3647;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,102,1039	0/0:11,0:11:27.06:0,27,276	0/0:21,0:15:22.63:0,23,270	0/0:34,0:26:53.06:0,53,525	0/0:35,0:35:99:0,99,1003	0/0:27,0:27:63.12:0,63,635	0/0:23,0:23:39.53:0,40,411	0/0:34,0:34:78.16:0,78,790	0/0:24,0:24:66.15:0,66,673	1/1:6,17:23:51.16:641,51,0	1/1:0,17:17:51.16:641,51,0	1/1:2,11:13:30.10:377,30,0	1/1:1,13:15:39.12:489,39,0	1/1:2,22:24:57.18:717,57,0	1/1:2,25:27:69.22:868,69,0	1/1:1,15:16:42.13:528,42,0	1/1:1,33:34:93.30:1170,93,0	1/1:5,26:32:56.21:816,56,0	1/1:6,21:27:63.16:762,63,0	1/1:2,24:26:69.18:850,69,0	1/1:1,31:33:83.94:1030,84,0	1/1:1,20:21:54.17:679,54,0	1/1:2,25:27:69.22:865,69,0	1/1:3,38:41:99:1396,111,0	0/0:25,0:25:63.13:0,63,642	0/0:22,1:23:22.38:0,22,539	0/0:22,0:20:57.12:0,57,581	0/0:23,0:22:63.14:0,63,642
chr10	19711939	.	CATATATATATATATATATATATATATATATATATAT	C	9652.43	PASS	AC=28;AF=0.700;AN=40;BaseQRankSum=3.258;DP=272;FS=10.141;HRun=0;HaplotypeScore=265.1898;InbreedingCoeff=0.5668;MQ=63.06;MQ0=0;MQRankSum=-3.547;QD=42.71;ReadPosRankSum=3.692;VQSLOD=2.2189;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:4:6:0,6,87	./.	0/0:7,0:7:0.47:0,0,1	0/0:9,0:7:6.02:0,6,78	0/0:5,0:5:12.02:0,12,320	./.	./.	0/0:5,0:5:6.02:0,6,294	./.	1/1:17,0:17:3:54,3,0	1/1:11,8:19:15.01:906,15,0	1/1:9,6:15:9.03:822,9,0	1/1:9,6:15:15.05:1371,15,0	1/1:5,7:12:15.94:1372,16,0	./.	1/1:16,8:24:20.97:1919,21,0	1/1:15,4:19:3.01:274,3,0	1/1:6,2:8:3.01:134,3,0	1/1:8,0:8:3.01:60,3,0	1/1:7,10:17:18.06:1423,18,0	1/1:17,0:17:11.67:164,12,0	1/1:10,10:20:9.03:823,9,0	1/1:17,5:22:3.01:274,3,0	1/1:13,0:13:3.01:57,3,0	0/0:4,0:4:3.01:0,3,66	./.	./.	./.
chr10	19714689	.	AT	A	654.01	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.210;DP=654;FS=17.744;HRun=10;HaplotypeScore=68.0909;InbreedingCoeff=0.9523;MQ=75.08;MQ0=0;MQRankSum=-0.382;QD=15.21;ReadPosRankSum=-3.804;VQSLOD=1.5589;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:76.43:0,76,824	0/0:4,0:4:12.03:0,12,133	0/0:14,0:14:24.02:0,24,241	0/0:16,0:16:15.62:0,16,176	0/0:25,1:27:51.98:0,52,777	0/0:29,0:29:72.67:0,73,798	0/0:28,0:28:72.15:0,72,777	1/1:13,30:43:86.90:749,87,0	0/0:23,0:23:63.15:0,63,681	0/0:23,0:24:60:0,60,645	0/0:18,0:18:48.13:0,48,531	0/0:27,0:27:69.13:0,69,741	0/0:26,0:26:69.15:0,69,749	0/0:20,1:21:22.09:0,22,472	0/0:22,0:22:57.09:0,57,602	0/0:25,0:26:75.04:0,75,811	0/0:14,0:17:47.63:0,48,474	0/0:29,0:29:69.17:0,69,753	0/0:19,0:19:42.11:0,42,457	0/0:22,0:23:66.01:0,66,711	0/0:17,0:17:36.10:0,36,398	0/0:20,0:20:54.15:0,54,597	0/0:13,0:14:38.94:0,39,412	0/0:23,0:23:66.15:0,66,708	0/0:29,0:31:86.90:0,87,924	0/0:38,0:39:99:0,108,1167	0/0:28,0:28:70.42:0,70,759	0/0:16,0:18:50.80:0,51,526
chr10	19714800	.	TTC	T	2285.50	PASS	AB=0.676;AC=46;AF=0.821;AN=56;BaseQRankSum=5.065;DP=495;FS=29.800;HRun=0;HaplotypeScore=125.6733;InbreedingCoeff=0.3449;MQ=75.70;MQ0=10;MQRankSum=1.620;QD=6.18;ReadPosRankSum=4.908;VQSLOD=1.3040;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,1:10:6.02:66,6,0	1/1:4,3:7:3.01:33,3,0	0/0:29,0:18:0:0,0,0	0/0:41,0:22:3.95:0,4,43	1/1:9,6:16:8.69:61,9,0	1/1:6,9:18:2.77:202,3,0	0/1:13,6:19:17.89:237,0,18	0/0:38,0:38:23.96:0,24,266	0/1:5,11:16:20.90:207,0,21	1/1:8,0:17:25.57:126,26,0	1/1:6,0:9:2.84:14,3,0	1/1:13,0:23:21.13:100,21,0	1/1:18,0:25:19.47:97,19,0	1/1:2,0:9:16.24:76,16,0	1/1:13,11:23:15.04:165,15,0	1/1:17,0:30:31.42:172,31,0	1/1:4,0:5:1.25:3,1,0	1/1:9,0:13:14.20:70,14,0	1/1:11,0:13:5.68:28,6,0	1/1:2,0:6:5.68:28,6,0	0/0:15,0:17:0:0,0,0	1/1:4,0:9:5.46:28,5,0	1/1:8,0:15:11.36:56,11,0	1/1:20,0:24:2.84:14,3,0	1/1:2,5:7:12.03:132,12,0	1/1:8,9:17:21.05:224,21,0	1/1:18,5:24:20.55:174,21,0	1/1:10,1:11:11.85:105,12,0
chr10	19714843	.	A	AGTGT	6976.82	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=3.218;DP=559;FS=11.750;HRun=0;HaplotypeScore=151.0651;InbreedingCoeff=0.9316;MQ=52.71;MQ0=5;MQRankSum=-11.166;QD=25.84;ReadPosRankSum=2.646;VQSLOD=4.3540;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:63.03:0,63,1039	0/0:10,0:10:27.02:0,27,402	0/0:21,0:13:35.83:0,36,460	0/0:24,0:16:26.81:0,27,531	0/0:20,0:20:36.59:0,37,610	0/0:33,0:33:62.35:0,62,1065	0/0:24,0:24:54.17:0,54,885	1/1:5,9:15:30.10:690,30,0	0/0:26,0:26:54.17:0,54,887	1/1:17,3:21:50.70:1029,51,0	1/1:5,6:11:3.01:42,3,0	1/1:12,9:23:33.11:579,33,0	1/1:11,16:29:57.19:1124,57,0	1/1:8,10:22:30.09:498,30,0	0/0:20,0:20:33.11:0,33,553	1/1:21,0:21:43.70:743,44,0	1/1:4,6:11:11.83:223,12,0	1/1:10,1:11:19.48:507,19,0	1/1:13,1:15:23.86:403,24,0	1/1:5,7:13:9.03:159,9,0	1/1:4,17:22:3.01:68,3,0	1/1:10,2:12:18.06:369,18,0	1/1:10,9:20:17.82:302,18,0	1/1:5,13:21:12.04:241,12,0	0/0:23,0:23:41.70:0,42,686	0/0:26,0:26:48.10:0,48,740	0/0:17,0:17:44.96:0,45,721	0/0:17,0:17:24:0,24,549
chr10	19720819	.	CTCTGTGTGTGTGTGTGTG	C	2435.74	PASS	AB=0.950;AC=13;AF=0.250;AN=52;BaseQRankSum=5.147;DP=550;FS=11.822;HRun=0;HaplotypeScore=187.0889;InbreedingCoeff=-0.2188;MQ=44.81;MQ0=33;MQRankSum=-1.664;QD=8.92;ReadPosRankSum=-1.394;VQSLOD=1.7511;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:38:62.88:0,63,2635	0/1:11,0:10:9.07:9,0,327	0/0:4,0:1:2.04:0,2,6	./.	0/0:19,0:17:6.87:0,7,50	0/0:20,0:19:39.09:0,39,2268	0/0:29,0:25:45.07:0,45,1250	0/0:23,0:22:36.76:0,37,928	0/0:21,0:21:47.81:0,48,2244	0/1:13,11:24:99:612,0,100	0/0:14,0:13:5.97:0,6,45	0/1:21,0:20:3.22:3,0,72	0/1:22,0:22:99:332,0,124	0/1:30,0:28:4.09:329,0,4	0/0:26,0:25:63.17:0,63,3253	0/1:22,0:22:9.35:229,0,9	0/1:23,0:21:75.31:280,0,75	0/1:11,0:6:12.76:113,0,13	0/1:7,7:13:6.05:585,0,6	./.	0/1:34,0:31:30.50:30,0,56	0/1:17,0:14:15.10:26,0,15	0/1:12,0:9:14.88:15,0,16	0/1:32,0:32:14.11:14,0,25	0/0:27,0:26:60.21:0,60,2704	0/0:15,0:13:29.07:0,29,1071	0/0:19,0:19:48.11:0,48,1922	0/0:7,0:5:9.97:0,10,546
chr10	19720821	.	CTGTGTGTGTGTGTGTG	C	2320.61	PASS	AB=0.667;AC=19;AF=0.396;AN=48;BaseQRankSum=6.591;DP=568;FS=12.390;HRun=0;HaplotypeScore=178.3863;InbreedingCoeff=0.6537;MQ=44.94;MQ0=35;MQRankSum=-2.093;QD=10.69;ReadPosRankSum=-0.444;VQSLOD=2.0651;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:37:57.20:0,57,2422	0/0:6,0:11:9.03:0,9,353	0/0:7,0:2:5.61:0,6,155	./.	0/0:13,0:17:2.99:0,3,24	0/0:21,0:20:42.10:0,42,2373	0/0:29,0:25:30.03:0,30,1332	0/0:25,0:24:41.98:0,42,1167	0/0:21,0:21:44.82:0,45,2153	1/1:23,0:23:21.99:582,22,0	1/1:7,7:13:2.97:20,3,0	1/1:9,12:20:3.01:39,3,0	0/1:11,11:22:23.32:287,0,23	1/1:8,21:27:8.59:289,9,0	0/0:28,0:27:60.21:0,60,3543	1/1:2,21:23:7.96:240,8,0	1/1:12,11:22:3.31:293,3,0	1/1:11,0:6:4.80:138,5,0	1/1:15,0:13:23.83:591,24,0	./.	1/1:21,0:32:1.92:7,2,0	0/0:8,9:14:0:0,0,0	./.	./.	0/0:29,0:27:63.21:0,63,2628	0/0:16,0:14:36.07:0,36,1170	0/0:19,0:19:48.03:0,48,1734	0/0:7,0:5:9.03:0,9,508
chr10	19722772	.	G	GA	559.05	PASS	AB=0.905;AC=9;AF=0.173;AN=52;BaseQRankSum=6.622;DP=787;FS=14.541;HRun=0;HaplotypeScore=114.1680;InbreedingCoeff=0.2038;MQ=29.02;MQ0=236;MQRankSum=-2.024;QD=2.85;ReadPosRankSum=1.225;VQSLOD=1.8127;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:36:45.10:0,45,572	0/0:20,0:13:14.56:0,15,135	./.	./.	0/0:33,0:22:15.02:0,15,191	0/0:29,0:28:45.11:0,45,601	0/0:34,0:26:54.15:0,54,731	1/1:14,0:3:6.84:46,7,0	0/0:35,0:33:62.99:0,63,857	0/0:28,0:17:51.17:0,51,709	0/1:9,0:2:0:0,0,0	0/1:34,1:29:2.08:2,0,524	0/0:28,0:20:27.09:0,27,377	0/0:25,0:19:33.11:0,33,455	0/0:48,0:45:74.69:0,75,989	0/0:29,0:23:24.88:0,25,293	0/1:21,2:14:70.99:71,0,205	0/1:13,6:16:99:256,0,137	0/0:17,0:6:18.04:0,18,230	0/0:16,0:7:6.02:0,6,84	0/1:52,8:22:80.39:233,0,80	0/0:24,0:15:13.08:0,13,137	0/1:12,0:5:0:0,0,0	0/1:18,6:15:65.12:71,0,65	0/0:34,0:25:13.25:0,13,130	0/0:41,0:29:75.13:0,75,966	0/0:22,0:21:34.34:0,34,464	0/0:13,0:11:21.05:0,21,276
chr10	19722885	.	TG	T	2345.55	PASS	AB=0.577;AC=25;AF=0.481;AN=52;BaseQRankSum=12.174;DP=524;FS=0.000;HRun=3;HaplotypeScore=83.1000;InbreedingCoeff=0.7458;MQ=40.15;MQ0=102;MQRankSum=-3.066;QD=16.52;ReadPosRankSum=-3.872;VQSLOD=2.3954;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:43:90.30:0,90,1270	0/0:17,0:15:33.07:0,33,434	./.	./.	0/0:34,0:28:53.55:0,54,643	0/0:22,0:21:48.11:0,48,640	0/0:34,0:25:54.59:0,55,655	0/0:8,0:5:11.94:0,12,125	0/0:38,0:36:75.24:0,75,1047	1/1:2,6:5:15.05:186,15,0	1/1:2,3:4:3.01:38,3,0	1/1:0,15:13:30.09:371,30,0	1/1:2,15:15:35.99:394,36,0	1/1:1,13:12:32.95:355,33,0	0/0:48,0:43:99:0,103,1420	0/1:1,13:14:7.02:355,0,7	1/1:0,8:8:9.03:111,9,0	0/1:1,5:6:28.07:133,0,28	1/1:4,6:5:12.04:149,12,0	1/1:5,3:4:6.02:74,6,0	1/1:5,15:16:16.17:194,16,0	1/1:3,2:2:5.95:51,6,0	0/1:2,2:1:0:0,0,0	1/1:3,5:7:11.99:131,12,0	0/0:20,0:14:21.07:0,21,302	0/0:34,0:30:90.30:0,90,1287	0/0:13,0:13:36.12:0,36,516	0/0:7,0:5:15.05:0,15,216
chr10	19723245	.	TGCTCTACCACGTCATCGGGCTCCATGCAG	T	285.34	PASS	AB=1.000;AC=5;AF=0.096;AN=52;BaseQRankSum=5.538;DP=872;FS=30.534;HRun=0;HaplotypeScore=323.7582;InbreedingCoeff=0.3227;MQ=32.96;MQ0=221;MQRankSum=-4.166;QD=1.54;ReadPosRankSum=-4.802;VQSLOD=0.9071;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:39:21.15:0,21,766	0/0:5,0:4:9.03:0,9,163	./.	./.	0/0:32,0:26:14.10:0,14,252	0/0:23,0:22:27.08:0,27,440	0/0:31,0:27:34.68:0,35,545	1/1:13,9:9:27.06:366,27,0	0/0:37,0:37:50.84:0,51,960	0/0:28,0:21:50.88:0,51,922	0/0:11,0:8:17.88:0,18,397	0/0:51,0:40:21.12:0,21,1018	0/0:36,0:25:30.08:0,30,576	0/0:54,0:40:28.42:0,28,1117	0/0:49,0:47:60.20:0,60,1460	0/0:29,0:24:48.03:0,48,1050	0/1:36,0:21:7.71:8,0,573	0/0:30,0:23:27.08:0,27,514	0/1:17,0:8:19.92:20,0,256	0/0:14,0:8:20.66:0,21,385	0/1:110,0:51:1.01:1,0,733	0/0:21,0:11:7.22:0,7,161	0/0:10,0:7:7.26:0,7,168	0/0:23,0:15:10.34:0,10,286	0/0:15,0:8:9.03:0,9,236	0/0:35,0:31:80.97:0,81,1457	0/0:33,0:32:77.75:0,78,1668	0/0:14,0:8:18.06:0,18,500
chr10	19724590	.	G	GAA	7572.31	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-7.768;DP=550;FS=8.107;HRun=10;HaplotypeScore=69.0277;InbreedingCoeff=0.9852;MQ=65.36;MQ0=3;MQRankSum=-0.101;QD=26.20;ReadPosRankSum=0.839;VQSLOD=4.3603;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:27:63.53:0,64,668	0/0:5,0:5:15.03:0,15,153	0/0:18,0:10:17.28:0,17,126	0/0:16,0:9:23.60:0,24,212	0/0:27,0:27:59.86:0,60,601	0/0:13,0:13:27:0,27,273	0/0:17,0:17:45.07:0,45,448	0/0:39,0:38:57.66:0,58,814	0/0:19,0:20:44.78:0,45,434	1/1:4,17:24:56.54:666,57,0	1/1:10,6:16:36.09:466,36,0	1/1:2,22:25:57.18:814,57,0	1/1:1,11:12:15.01:199,15,0	1/1:4,21:26:44.84:589,45,0	0/0:17,0:18:41.76:0,42,468	1/1:1,11:13:32.60:457,33,0	1/1:8,26:34:57.17:811,57,0	1/1:5,23:26:49.18:666,49,0	1/1:6,13:24:54.44:638,54,0	1/1:0,19:21:48.08:658,48,0	1/1:1,11:12:21.07:313,21,0	1/1:6,15:23:41.88:542,42,0	1/1:4,11:15:27.08:386,27,0	1/1:2,11:14:26.36:366,26,0	0/0:15,0:15:29.53:0,30,284	0/0:20,1:21:9.24:0,9,440	0/0:13,0:13:36.06:0,36,365	0/0:12,0:12:29.43:0,29,283
chr10	19725925	.	C	CTTT	10176.96	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-5.902;DP=560;FS=8.971;HRun=9;HaplotypeScore=74.6378;InbreedingCoeff=0.9884;MQ=62.01;MQ0=0;MQRankSum=-3.037;QD=35.09;ReadPosRankSum=2.135;VQSLOD=3.6051;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:33:39.11:0,39,480	0/0:15,0:15:36.05:0,36,439	0/0:8,0:7:15.03:0,15,190	0/0:9,0:8:9.02:0,9,112	0/0:19,0:20:54.06:0,54,648	0/0:29,0:29:54.13:0,54,682	0/0:19,0:19:45.11:0,45,568	1/1:4,0:23:55.05:435,55,0	0/0:21,0:22:38.99:0,39,470	1/1:7,21:30:72.20:1313,72,0	1/1:3,14:18:34.36:632,34,0	1/1:2,13:17:33.07:611,33,0	1/1:3,10:16:36.09:606,36,0	1/1:2,11:13:36.12:691,36,0	0/0:21,0:20:48.14:0,48,593	1/1:5,11:18:24.06:437,24,0	1/1:3,13:19:33.07:562,33,0	1/1:4,19:26:50.89:846,51,0	1/1:7,9:16:27.04:443,27,0	1/1:5,24:29:78.22:1497,78,0	1/1:0,8:8:21.07:414,21,0	1/1:4,10:17:40.34:699,40,0	1/1:3,10:16:25.80:471,26,0	1/1:4,14:18:30.06:519,30,0	0/0:24,0:25:64.76:0,65,830	0/0:29,0:29:78.21:0,78,959	0/0:28,0:28:41.65:0,42,560	0/0:12,0:12:33.10:0,33,417
chr10	19726943	.	AGTGTGT	A	704.92	PASS	AB=0.797;AC=14;AF=0.304;AN=46;BaseQRankSum=-2.575;DP=536;FS=1.062;HRun=0;HaplotypeScore=113.9295;InbreedingCoeff=0.5182;MQ=68.53;MQ0=12;MQRankSum=-4.720;QD=4.93;ReadPosRankSum=0.738;VQSLOD=2.1013;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:23,1:24:13.83:151,14,0	1/1:12,0:13:9.03:140,9,0	./.	./.	0/1:18,2:20:14.93:111,0,15	0/1:7,1:13:28.44:80,0,28	./.	0/0:21,0:21:3.28:0,3,9	1/1:15,0:17:1.77:4,2,0	0/0:30,0:30:11.83:0,12,158	0/0:15,0:15:6.02:0,6,124	0/0:18,0:18:15.05:0,15,251	0/0:22,0:22:9.03:0,9,174	0/0:17,0:16:5.51:0,6,61	1/1:10,0:14:0.88:2,1,0	0/0:28,0:28:15.05:0,15,269	0/0:17,0:16:13.59:0,14,239	0/0:13,0:13:12.04:0,12,225	0/0:9,0:9:9.02:0,9,137	0/0:14,0:13:17.13:0,17,207	0/0:31,0:30:9.03:0,9,153	0/0:16,0:15:12.04:0,12,196	0/0:19,0:19:9:0,9,113	0/0:27,0:27:17.93:0,18,292	1/1:16,10:25:15.05:300,15,0	./.	1/1:12,3:15:3.01:60,3,0	./.
chr10	19726988	.	G	GTA	2105.11	PASS	AB=0.675;AC=22;AF=0.393;AN=56;BaseQRankSum=7.608;DP=580;FS=2.309;HRun=0;HaplotypeScore=85.4886;InbreedingCoeff=0.3404;MQ=64.73;MQ0=15;MQRankSum=1.687;QD=6.86;ReadPosRankSum=1.843;VQSLOD=3.3664;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:27:10.74:0,11,313	0/0:14,0:14:11.35:0,11,212	0/0:30,0:16:47.79:0,48,453	0/0:37,0:27:65.24:0,65,696	0/0:15,0:15:38.75:0,39,297	0/0:14,0:12:8.54:0,9,149	0/0:21,0:21:50.81:0,51,400	0/0:24,0:23:65.86:0,66,523	0/0:16,0:16:29.79:0,30,228	1/1:4,20:24:33.05:451,33,0	1/1:1,15:16:6.02:115,6,0	0/1:6,17:23:17.28:141,0,17	0/1:7,12:20:34.83:46,0,35	1/1:5,23:28:0.99:101,1,0	0/0:25,0:24:50.67:0,51,406	1/1:1,23:24:6.84:210,7,0	0/1:11,1:10:24.81:129,0,25	1/1:2,11:13:5.07:174,5,0	1/1:15,0:14:19.23:259,19,0	1/1:4,14:17:4.40:166,4,0	0/1:11,27:37:5:101,0,5	0/1:4,12:15:6.95:153,0,7	0/1:5,9:14:35.14:36,0,35	0/1:4,31:35:7.03:201,0,7	0/0:28,0:27:25.66:0,26,313	0/0:12,0:12:31.20:0,31,224	0/1:10,0:10:3.37:3,0,65	0/0:10,0:10:28.95:0,29,215
chr10	19728489	.	A	AT	478.83	PASS	AC=2;AF=0.038;AN=52;BaseQRankSum=-4.719;DP=145;FS=29.690;HRun=7;HaplotypeScore=16.9797;InbreedingCoeff=0.2962;MQ=73.64;MQ0=7;MQRankSum=-2.082;QD=23.94;ReadPosRankSum=0.540;VQSLOD=1.3860;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:7:18.01:0,18,167	0/0:1,0:1:3:0,3,29	0/0:9,0:5:8.19:0,8,109	0/0:13,0:2:3:0,3,29	0/0:4,0:4:9.01:0,9,87	0/0:6,0:6:18.01:0,18,168	0/0:2,0:2:6.01:0,6,58	1/1:2,18:19:51.02:571,51,0	0/0:2,0:2:5.99:0,6,52	0/0:4,0:4:9:0,9,84	0/0:4,0:4:12.01:0,12,111	0/0:3,0:3:6:0,6,58	0/0:3,0:3:9.01:0,9,87	0/0:2,0:2:6.01:0,6,58	0/0:4,0:4:8.99:0,9,81	0/0:1,0:1:3:0,3,29	0/0:14,0:13:30.05:0,30,290	0/0:15,0:14:32.90:0,33,282	./.	0/0:6,0:6:15.01:0,15,139	0/0:2,0:2:6.01:0,6,58	0/0:2,0:2:5.99:0,6,52	0/0:4,0:4:8.98:0,9,77	0/0:2,0:2:6.01:0,6,58	0/0:4,0:4:8.98:0,9,76	0/0:4,0:4:12.02:0,12,116	0/0:5,0:5:15.01:0,15,138	./.
chr10	19729428	.	CAGAA	C	972.94	PASS	AB=0.962;AC=11;AF=0.220;AN=50;BaseQRankSum=-1.086;DP=616;FS=0.733;HRun=0;HaplotypeScore=112.2390;InbreedingCoeff=0.7210;MQ=60.51;MQ0=3;MQRankSum=1.344;QD=6.90;ReadPosRankSum=1.898;VQSLOD=2.5582;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:69.18:0,69,1408	0/0:17,0:17:15.04:0,15,304	./.	./.	1/1:15,11:26:32.96:418,33,0	1/1:16,10:26:6.02:91,6,0	1/1:16,0:15:13.89:179,14,0	./.	0/1:24,1:25:18.34:18,0,457	0/0:26,0:26:35.73:0,36,514	0/0:20,0:20:21.02:0,21,299	0/0:31,0:31:35.81:0,36,472	0/0:25,0:25:9.03:0,9,173	0/0:17,0:17:3.01:0,3,52	1/1:14,0:26:12.01:109,12,0	0/0:32,0:32:15.05:0,15,265	0/0:20,0:20:14.71:0,15,129	0/0:17,0:18:14.98:0,15,208	0/0:13,0:13:5.81:0,6,58	0/0:28,0:27:32.96:0,33,284	0/0:9,0:9:2.04:0,2,6	0/0:31,0:31:32.97:0,33,422	0/0:24,0:24:13.01:0,13,109	0/0:11,0:11:9.01:0,9,130	1/1:10,12:22:21.07:318,21,0	0/0:24,0:24:33.11:0,33,704	0/0:25,0:25:36.58:0,37,752	0/0:9,0:9:24.08:0,24,517
chr10	19729484	.	AAG	A	881.68	PASS	AB=0.979;AC=11;AF=0.196;AN=56;BaseQRankSum=6.559;DP=622;FS=2.510;HRun=0;HaplotypeScore=118.0709;InbreedingCoeff=0.1271;MQ=61.56;MQ0=6;MQRankSum=-0.903;QD=4.22;ReadPosRankSum=-2.979;VQSLOD=2.3591;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,99,1695	0/0:14,0:14:36.12:0,36,584	0/0:10,0:8:21.17:0,21,257	0/0:12,0:8:21.07:0,21,257	0/0:22,0:22:39.73:0,40,505	0/0:21,0:20:33.58:0,34,501	0/0:19,0:18:37.06:0,37,550	0/1:36,0:34:99:176,0,265	0/0:23,0:23:66.22:0,66,1049	0/1:35,0:35:19.23:19,0,254	0/0:28,0:28:22.09:0,22,374	1/1:16,8:24:24.57:202,25,0	0/0:27,0:27:8.93:0,9,92	0/0:17,0:17:2.96:0,3,19	0/0:21,0:21:14.24:0,14,350	0/0:22,0:22:17.94:0,18,184	0/1:20,0:20:15.43:50,0,15	0/1:18,0:17:38.78:73,0,39	0/1:15,1:15:60.62:76,0,61	0/1:29,3:31:99:243,0,128	1/1:9,1:10:3.69:109,4,0	0/0:16,0:16:9.37:0,9,145	0/0:23,0:23:15.16:0,15,321	0/1:18,0:18:48.69:85,0,49	0/0:29,0:29:51.64:0,52,768	0/0:20,0:20:59.41:0,59,976	0/0:31,0:31:90.31:0,90,1457	0/0:23,0:23:69.24:0,69,1142
chr10	19729486	.	G	GAAAGAGAA	10835.52	PASS	AB=0.533;AC=29;AF=0.518;AN=56;BaseQRankSum=-2.913;DP=649;FS=1.964;HRun=0;HaplotypeScore=150.6359;InbreedingCoeff=0.8814;MQ=61.59;MQ0=6;MQRankSum=-1.163;QD=29.61;ReadPosRankSum=-2.943;VQSLOD=4.2525;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,99,1936	0/0:13,0:13:36.12:0,36,671	0/0:10,0:8:18.67:0,19,261	0/0:14,0:10:20.37:0,20,247	0/0:22,0:22:56.98:0,57,850	0/0:21,0:20:39.11:0,39,646	0/0:18,0:17:25.41:0,25,634	1/1:37,0:35:63.58:948,64,0	0/0:23,0:23:69.24:0,69,1262	1/1:10,0:38:99:1685,105,0	1/1:0,26:30:68.77:948,69,0	1/1:17,0:24:58.98:1095,59,0	1/1:1,26:32:4.95:267,5,0	1/1:0,17:20:3.01:135,3,0	0/0:21,0:21:28.99:0,29,506	0/1:3,20:24:74.54:492,0,75	1/1:4,0:22:15.05:308,15,0	1/1:19,0:18:51.16:828,51,0	1/1:19,0:18:39.45:661,39,0	1/1:31,0:31:81.15:1268,81,0	1/1:9,0:10:24.08:372,24,0	1/1:0,14:16:33.02:822,33,0	1/1:1,22:24:21.17:228,21,0	1/1:19,0:19:46.71:779,47,0	0/0:29,0:29:72.22:0,72,1220	0/0:20,0:20:18.29:0,18,1136	0/0:30,0:30:90.26:0,90,1601	0/0:28,0:28:69.23:0,69,1396
chr10	19729490	.	A	AAG	387.03	PASS	AB=0.969;AC=10;AF=0.179;AN=56;BaseQRankSum=8.734;DP=656;FS=12.403;HRun=0;HaplotypeScore=124.3183;InbreedingCoeff=0.0387;MQ=62.20;MQ0=5;MQRankSum=-4.122;QD=1.68;ReadPosRankSum=-2.032;VQSLOD=1.4931;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:96.27:0,96,1331	0/0:15,0:15:42.12:0,42,566	0/0:12,0:10:24.48:0,24,293	0/0:14,0:10:23.31:0,23,282	0/0:23,0:23:58.05:0,58,752	0/0:22,0:21:42.13:0,42,585	0/0:17,0:16:42.11:0,42,601	0/0:37,0:36:55.93:0,56,472	0/0:23,0:23:63.20:0,63,885	0/1:37,0:37:7.84:8,0,263	0/0:27,0:27:2.37:0,2,129	0/1:18,7:25:51.04:308,0,51	0/1:32,0:32:1.95:2,0,68	0/1:21,0:21:0.04:0,0,59	0/0:20,0:20:34.32:0,34,453	0/1:24,0:24:19.02:19,0,72	1/1:22,0:22:10.61:40,11,0	0/0:20,0:19:41.89:0,42,239	0/0:18,0:17:10.91:0,11,188	0/1:31,1:31:99:111,0,182	0/0:11,0:11:16.80:0,17,71	0/1:15,0:15:20.87:21,0,90	0/1:22,0:22:12.32:12,0,211	0/0:21,0:21:33.43:0,33,220	0/0:29,0:29:75.24:0,75,1050	0/0:21,0:21:63.15:0,63,862	0/0:32,0:32:96.30:0,96,1340	0/0:31,0:31:93.28:0,93,1288
chr10	19731523	.	AC	A	1118.22	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.980;DP=762;FS=0.000;HRun=3;HaplotypeScore=85.8154;InbreedingCoeff=0.9840;MQ=84.11;MQ0=0;MQRankSum=0.073;QD=31.06;ReadPosRankSum=-4.166;VQSLOD=1.7557;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,159,2237	0/0:11,0:10:33.11:0,33,473	0/0:29,1:30:84.13:0,84,1121	0/0:25,0:25:72.17:0,72,938	0/0:30,0:30:87.27:0,87,1231	0/0:24,0:24:72.09:0,72,975	0/0:28,0:28:81.27:0,81,1166	1/1:2,34:36:99:1213,99,0	0/0:27,0:27:78.25:0,78,1103	0/0:25,0:25:75.21:0,75,1040	0/0:31,0:31:87.27:0,87,1232	0/0:24,0:24:72.23:0,72,1018	0/0:34,0:34:99:0,99,1417	0/0:26,0:26:78.26:0,78,1123	0/0:27,0:27:78.22:0,78,1068	0/0:29,0:29:87.27:0,87,1216	0/0:30,0:29:90.29:0,90,1272	0/0:5,0:5:15.05:0,15,216	0/0:13,0:13:36.11:0,36,502	0/0:40,0:40:99:0,117,1657	0/0:43,0:43:99:0,126,1795	0/0:34,0:34:99:0,102,1431	0/0:26,0:26:72.23:0,72,1017	0/0:17,0:17:48.14:0,48,671	0/0:16,0:16:45.15:0,45,648	0/0:35,0:35:99:0,102,1469	0/0:30,0:29:90.30:0,90,1294	0/0:12,0:12:36.12:0,36,517
chr10	19731582	.	GA	G	759.30	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.530;DP=791;FS=0.000;HRun=3;HaplotypeScore=75.5469;InbreedingCoeff=0.9993;MQ=80.45;MQ0=0;MQRankSum=-0.498;QD=33.01;ReadPosRankSum=-3.021;VQSLOD=2.6403;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,154,2201	0/0:12,0:12:36.12:0,36,518	0/0:22,0:21:56.91:0,57,737	0/0:18,0:18:54.15:0,54,731	0/0:28,0:28:78.26:0,78,1111	0/0:28,0:28:84.28:0,84,1210	0/0:29,0:29:84.25:0,84,1158	1/1:0,23:23:69.22:854,69,0	0/0:31,0:31:87.29:0,87,1253	0/0:29,0:29:81.27:0,81,1151	0/0:28,0:28:81.27:0,81,1166	0/0:31,0:31:90.29:0,90,1277	0/0:35,0:35:96.31:0,96,1349	0/0:31,0:31:92.52:0,93,1303	0/0:30,0:30:90.29:0,90,1277	0/0:34,0:34:99:0,102,1429	0/0:29,0:29:87.28:0,87,1224	0/0:10,0:10:30.10:0,30,432	0/0:23,0:23:69.23:0,69,994	0/0:37,0:37:99:0,105,1493	0/0:42,0:42:99:0,126,1742	0/0:25,0:25:69.22:0,69,976	0/0:34,0:34:99:0,102,1468	0/0:27,0:27:81.23:0,81,1141	0/0:20,0:20:54.17:0,54,760	0/0:35,0:35:99:0,102,1452	0/0:33,0:33:96.32:0,96,1371	0/0:14,0:14:42.14:0,42,604
chr10	19732355	.	TG	T	10246.87	PASS	AB=0.917;AC=29;AF=0.518;AN=56;BaseQRankSum=12.276;DP=568;FS=5.329;HRun=2;HaplotypeScore=57.6987;InbreedingCoeff=0.9316;MQ=79.84;MQ0=0;MQRankSum=-0.819;QD=33.38;ReadPosRankSum=3.440;VQSLOD=4.7905;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:72.24:0,72,1078	0/0:7,0:7:21.07:0,21,315	0/0:19,0:19:49.21:0,49,635	0/0:12,0:11:21.01:0,21,246	0/0:32,0:32:90.28:0,90,1305	0/0:18,0:18:54.17:0,54,791	0/0:16,0:16:42.11:0,42,604	0/0:34,0:34:96.32:0,96,1425	0/0:25,0:25:69.21:0,69,1013	1/1:1,33:34:99:1281,99,0	1/1:0,22:22:57.19:740,57,0	1/1:0,19:19:57.19:740,57,0	1/1:0,15:15:45.15:583,45,0	1/1:0,10:10:27.09:351,27,0	0/0:12,0:12:36.12:0,36,540	1/1:0,20:20:51.17:662,51,0	1/1:0,20:20:57.19:740,57,0	1/1:0,13:13:36.12:467,36,0	1/1:4,21:25:63.20:817,63,0	1/1:1,31:32:87.28:1130,87,0	1/1:0,15:15:42.14:545,42,0	1/1:0,26:26:66.21:853,66,0	1/1:0,19:19:57.19:740,57,0	1/1:0,15:15:45.15:584,45,0	0/0:26,0:26:75.25:0,75,1123	0/1:20,2:22:11.72:12,0,815	0/0:26,0:25:78.26:0,78,1168	0/0:9,0:9:27.09:0,27,405
chr10	19736974	.	GCACACA	G	1265.43	PASS	AB=0.851;AC=18;AF=0.360;AN=50;BaseQRankSum=-5.764;DP=546;FS=0.000;HRun=0;HaplotypeScore=142.7823;InbreedingCoeff=0.6847;MQ=67.11;MQ0=4;MQRankSum=-4.253;QD=7.81;ReadPosRankSum=1.514;VQSLOD=2.4897;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	1/1:10,0:10:6.02:102,6,0	./.	./.	1/1:17,0:18:9.03:147,9,0	0/1:15,4:19:3.91:112,0,4	1/1:12,2:14:6.02:120,6,0	0/0:17,0:17:6.91:0,7,184	1/1:12,7:19:12.04:241,12,0	0/0:18,0:18:15.05:0,15,404	0/0:15,0:15:18.05:0,18,390	0/0:24,0:25:21.07:0,21,538	0/0:18,0:18:11.99:0,12,296	0/0:21,0:21:18.06:0,18,462	1/1:14,8:22:15.05:301,15,0	0/0:20,0:20:20.10:0,20,448	0/0:21,0:20:17.09:0,17,392	0/0:21,0:21:30.07:0,30,671	0/0:19,0:18:15.52:0,16,379	0/0:21,0:20:14.08:0,14,271	0/0:18,0:18:12.03:0,12,269	0/0:22,0:22:15.05:0,15,325	0/0:20,0:19:12.51:0,13,301	0/0:42,0:42:27.09:0,27,718	1/1:9,4:14:11.88:213,12,0	0/1:18,2:20:26.66:140,0,27	1/1:14,1:19:2.79:41,3,0	1/1:2,0:5:2.99:24,3,0
chr10	19737345	.	ATCTCACTC	A	810.68	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=0.596;DP=493;FS=4.306;HRun=0;HaplotypeScore=160.6094;InbreedingCoeff=0.8251;MQ=71.43;MQ0=15;MQRankSum=-3.926;QD=47.69;ReadPosRankSum=-2.216;VQSLOD=3.0278;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:39.13:0,39,898	0/0:5,0:5:6.72:0,7,170	0/0:39,0:10:9.89:0,10,161	0/0:49,0:18:32.38:0,32,463	0/0:16,0:16:42.14:0,42,983	0/0:17,0:16:45.14:0,45,1059	0/0:21,0:20:60.17:0,60,1189	1/1:5,11:16:33.11:905,33,0	0/0:7,0:7:21.07:0,21,536	0/0:12,0:11:33.11:0,33,850	0/0:18,0:17:20.87:0,21,531	0/0:18,0:18:33.10:0,33,770	0/0:10,0:10:27.07:0,27,499	0/0:18,0:18:39.13:0,39,1019	0/0:16,0:16:39.11:0,39,845	0/0:18,0:18:41.76:0,42,893	0/0:15,0:14:33.11:0,33,762	0/0:8,0:8:18.06:0,18,425	0/0:17,0:17:48.04:0,48,1023	0/0:17,0:17:33.01:0,33,739	0/0:20,0:19:30.06:0,30,674	0/0:22,0:22:17.10:0,17,434	0/0:17,0:16:27.09:0,27,675	0/0:25,0:24:35.43:0,35,856	0/0:7,0:7:18.05:0,18,410	0/0:19,0:19:57.19:0,57,1273	0/0:17,0:17:48.16:0,48,1042	0/0:6,0:6:12.04:0,12,281
chr10	19737348	.	TCA	T	523.64	PASS	AB=0.987;AC=21;AF=0.375;AN=56;BaseQRankSum=3.517;DP=478;FS=4.629;HRun=0;HaplotypeScore=116.1765;InbreedingCoeff=-0.0671;MQ=70.07;MQ0=17;MQRankSum=-1.911;QD=2.05;ReadPosRankSum=4.545;VQSLOD=1.7353;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:21:4.17:12,4,0	0/1:4,0:4:0.38:0,0,20	0/0:39,0:10:3.45:0,3,75	0/0:47,0:16:14.74:0,15,167	0/1:16,0:15:13.94:36,0,14	0/0:18,0:17:5.57:0,6,50	0/1:21,1:21:0.43:76,0,0	1/1:12,0:11:32.85:252,33,0	0/0:7,0:7:2.55:0,3,23	0/1:13,0:11:27.10:27,0,50	0/0:18,0:17:2.32:0,2,23	0/0:16,1:17:5.60:0,6,47	1/1:9,1:10:13.01:78,13,0	0/1:17,1:18:1.67:2,0,59	0/1:16,0:16:13.23:13,0,22	0/1:17,1:17:47.41:85,0,47	0/0:15,0:14:8.83:0,9,46	0/1:7,0:7:2.21:15,0,2	0/1:16,0:16:39.40:39,0,43	0/1:16,0:16:3.46:3,0,20	0/1:17,1:17:3.78:4,0,36	0/0:21,0:21:0.94:0,1,3	0/0:15,0:14:0.93:0,1,23	0/0:24,1:24:2.02:0,2,76	0/1:7,0:7:9.57:10,0,20	0/1:20,0:20:4.06:4,0,45	0/1:17,0:17:5.64:6,0,42	0/1:5,0:5:0.03:0,0,0
chr10	19737350	.	ACT	A	5766.50	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-5.187;DP=482;FS=1.036;HRun=0;HaplotypeScore=98.2569;InbreedingCoeff=0.8305;MQ=65.52;MQ0=17;MQRankSum=-1.326;QD=14.42;ReadPosRankSum=4.155;VQSLOD=4.6078;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:20:38.82:311,39,0	1/1:5,0:5:2.84:30,3,0	0/0:36,0:7:11.48:0,11,65	0/0:46,0:15:12.54:0,13,109	1/1:16,0:15:38.92:323,39,0	1/1:17,0:16:35.95:296,36,0	1/1:21,1:21:56.82:466,57,0	1/1:12,0:11:30.44:145,30,0	1/1:7,0:7:17.97:147,18,0	1/1:14,1:12:26.71:244,27,0	1/1:19,2:20:18.32:142,18,0	1/1:15,1:16:23.03:193,23,0	1/1:8,3:11:26.78:208,27,0	1/1:21,0:21:30.06:243,30,0	1/1:16,0:16:35.92:302,36,0	1/1:17,0:16:17.45:197,17,0	1/1:16,0:15:24.33:185,24,0	1/1:7,0:7:17.60:117,18,0	1/1:15,0:15:27.23:289,27,0	1/1:16,0:16:26.95:219,27,0	1/1:20,0:18:20.96:169,21,0	1/1:24,1:25:17.97:148,18,0	1/1:16,0:15:24.43:195,24,0	1/1:23,1:23:25.15:189,25,0	1/1:6,0:6:12:116,12,0	1/1:19,0:19:53.86:446,54,0	1/1:15,0:15:41.92:355,42,0	1/1:5,0:5:11.94:90,12,0
chr10	19737452	.	GAGAGAGAGAT	G	3492.74	PASS	AB=0.992;AC=32;AF=0.571;AN=56;BaseQRankSum=2.674;DP=504;FS=1.409;HRun=0;HaplotypeScore=136.1653;InbreedingCoeff=0.7058;MQ=58.44;MQ0=38;MQRankSum=-1.138;QD=11.53;ReadPosRankSum=-1.794;VQSLOD=2.5238;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:25:38.77:0,39,448	0/1:3,0:3:7.12:7,0,26	0/1:31,0:17:2.44:2,0,223	0/0:43,0:18:29.01:0,29,359	0/0:18,0:15:35.80:0,36,326	0/0:20,0:18:47.80:0,48,773	0/0:23,0:21:50.27:0,50,684	1/1:27,0:26:16.71:427,17,0	0/0:8,0:7:11.98:0,12,99	1/1:8,0:8:12.58:219,13,0	1/1:10,1:11:8.72:73,9,0	1/1:15,1:16:35.79:276,36,0	1/1:9,0:9:14.88:111,15,0	1/1:10,3:12:20.81:277,21,0	0/0:13,0:12:30.46:0,30,402	1/1:25,0:23:50.90:439,51,0	1/1:17,0:15:26.75:194,27,0	1/1:8,0:4:4.63:38,5,0	1/1:12,2:13:34.79:409,35,0	1/1:21,0:21:17.97:271,18,0	1/1:24,0:20:25.97:218,26,0	1/1:20,1:17:20.96:172,21,0	1/1:17,1:18:23.89:190,24,0	0/1:28,1:25:74.89:161,0,75	0/0:18,0:16:30.23:0,30,224	0/0:12,0:12:8.13:0,8,202	0/0:19,0:18:23.87:0,24,288	0/1:8,0:6:8.55:9,0,97
chr10	19737575	.	C	CT	593.66	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.459;DP=596;FS=2.860;HRun=4;HaplotypeScore=63.3685;InbreedingCoeff=0.9367;MQ=92.20;MQ0=0;MQRankSum=-3.259;QD=21.99;ReadPosRankSum=-2.655;VQSLOD=2.4767;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,138,1536	0/0:8,0:8:18.05:0,18,204	0/0:32,0:32:84.10:0,84,902	0/0:21,0:21:51.03:0,51,544	0/0:21,0:21:60.14:0,60,662	0/0:16,0:14:36.10:0,36,408	0/0:26,0:26:63.14:0,63,700	1/1:5,20:27:66.36:688,66,0	0/0:27,0:27:75.20:0,75,840	0/0:19,0:19:54.15:0,54,606	0/0:17,0:17:51.13:0,51,568	0/0:13,0:13:36.07:0,36,389	0/0:14,0:14:39.06:0,39,417	0/0:18,0:18:51.15:0,51,577	0/0:20,0:20:48.13:0,48,544	0/0:18,0:18:48.12:0,48,534	0/0:20,0:20:57.15:0,57,637	0/0:13,0:13:36.10:0,36,408	0/0:17,0:17:39.10:0,39,436	0/0:29,0:29:75.19:0,75,840	0/0:20,0:20:54.14:0,54,605	0/0:29,0:29:69.19:0,69,780	0/0:21,0:21:54.15:0,54,611	0/0:33,0:33:93.24:0,93,1037	0/0:11,0:11:27.07:0,27,306	0/0:22,0:22:66.16:0,66,726	0/0:31,0:31:90.24:0,90,1003	0/0:6,0:6:9.03:0,9,102
chr10	19738228	.	T	TAC	5454.36	PASS	AB=0.817;AC=29;AF=0.518;AN=56;BaseQRankSum=-12.105;DP=382;FS=2.125;HRun=0;HaplotypeScore=53.1377;InbreedingCoeff=0.7339;MQ=60.04;MQ0=1;MQRankSum=-0.268;QD=29.17;ReadPosRankSum=3.648;VQSLOD=6.1899;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:27.03:0,27,298	0/0:3,0:3:9.03:0,9,115	0/1:13,0:4:0:0,0,0	0/0:11,0:7:6.38:0,6,47	0/0:25,0:25:72.17:0,72,859	0/0:22,0:22:57.12:0,57,668	0/0:5,0:5:15.05:0,15,191	0/0:45,0:45:99:0,105,1238	0/0:17,0:17:48.13:0,48,583	1/1:1,17:18:51.14:796,51,0	1/1:2,13:15:24.08:400,24,0	1/1:0,6:6:18.06:301,18,0	0/1:2,8:10:14.09:320,0,14	1/1:0,8:8:21.07:351,21,0	0/0:11,0:11:30.10:0,30,381	1/1:0,7:7:15.05:251,15,0	1/1:3,23:26:54.18:901,54,0	1/1:1,21:22:45.15:753,45,0	1/1:5,10:15:30.49:408,30,0	1/1:1,5:6:15.05:251,15,0	1/1:0,1:1:3.01:50,3,0	1/1:0,1:1:3.01:50,3,0	1/1:0,11:11:30.10:501,30,0	1/1:0,2:2:3.01:50,3,0	0/0:13,0:13:36.08:0,36,418	0/1:23,3:25:70.44:70,0,727	0/0:21,0:21:57.09:0,57,686	0/0:10,0:10:27.04:0,27,300
chr10	19738539	.	GT	G	3716.41	PASS	AB=1.000;AC=32;AF=0.571;AN=56;BaseQRankSum=5.652;DP=361;FS=0.452;HRun=10;HaplotypeScore=58.7598;InbreedingCoeff=0.8241;MQ=73.72;MQ0=0;MQRankSum=-5.126;QD=18.77;ReadPosRankSum=1.547;VQSLOD=4.4442;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:39.06:0,39,406	0/0:5,0:5:14.99:0,15,152	0/1:11,0:10:9.22:9,0,97	0/1:9,0:9:16.77:17,0,87	0/0:18,0:18:45.06:0,45,455	0/0:16,0:16:33.09:0,33,365	0/0:16,1:18:18.86:0,19,393	1/1:4,5:9:17.98:154,18,0	0/0:13,0:14:29.91:0,30,313	1/1:3,13:16:41.96:359,42,0	1/1:2,12:14:29.97:260,30,0	1/1:3,12:15:41.99:364,42,0	1/1:2,10:12:32.99:284,33,0	1/1:2,14:16:44.98:389,45,0	0/0:19,0:19:50.91:0,51,513	1/1:4,17:21:56.96:488,57,0	1/1:2,7:9:21:182,21,0	1/1:5,7:12:23.91:200,24,0	1/1:3,7:10:23.99:208,24,0	1/1:1,8:9:23.99:208,24,0	1/1:1,2:3:2.99:26,3,0	1/1:2,8:10:23.96:203,24,0	1/1:5,5:10:20.99:182,21,0	1/1:3,9:12:20.98:182,21,0	0/0:12,0:12:30.07:0,30,319	0/0:20,1:21:51.11:0,51,547	0/0:20,0:20:54.09:0,54,561	0/0:5,0:5:9.01:0,9,92
chr10	19738562	.	TAGG	T	624.90	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-1.983;DP=402;FS=5.795;HRun=0;HaplotypeScore=94.2204;InbreedingCoeff=0.9296;MQ=66.12;MQ0=1;MQRankSum=-3.774;QD=39.06;ReadPosRankSum=1.239;VQSLOD=4.2221;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:53.89:0,54,520	0/0:7,0:7:21.06:0,21,243	0/0:10,0:6:12.02:0,12,150	0/0:9,0:9:20.51:0,21,282	0/0:15,0:15:44.94:0,45,460	0/0:19,0:19:48.06:0,48,826	0/0:11,0:11:30.02:0,30,513	1/1:1,15:16:42.12:720,42,0	0/0:11,0:11:33.10:0,33,718	0/0:16,0:16:42.09:0,42,475	0/0:16,0:16:41.88:0,42,404	0/0:16,0:16:47.98:0,48,500	0/0:15,0:15:42.07:0,42,459	0/0:15,0:15:44.87:0,45,480	0/0:17,0:17:51.12:0,51,602	0/0:19,0:18:54.07:0,54,604	0/0:17,0:17:41.95:0,42,432	0/0:10,0:11:29.94:0,30,289	0/0:16,0:17:47.82:0,48,503	0/0:11,0:11:30:0,30,284	0/0:13,0:13:29.87:0,30,304	0/0:12,0:12:24.05:0,24,283	0/0:11,0:11:33.10:0,33,382	0/0:15,0:15:35.88:0,36,387	0/0:10,0:10:30.05:0,30,326	0/0:18,0:18:51.06:0,51,543	0/0:27,0:27:72.09:0,72,749	0/0:7,0:7:12.04:0,12,143
chr10	19738563	.	AG	A	5142.39	PASS	AB=0.930;AC=49;AF=0.875;AN=56;BaseQRankSum=2.596;DP=398;FS=4.805;HRun=11;HaplotypeScore=63.4475;InbreedingCoeff=0.5339;MQ=66.08;MQ0=1;MQRankSum=-4.624;QD=13.97;ReadPosRankSum=0.314;VQSLOD=5.0394;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,11:20:28.99:227,29,0	1/1:1,6:7:20.96:169,21,0	0/1:8,0:6:15.70:16,0,23	0/1:8,1:9:9.42:9,0,102	1/1:4,10:15:32:252,32,0	0/0:17,1:19:5.41:0,5,253	0/1:7,1:8:3.60:4,0,165	1/1:17,0:17:28.67:86,29,0	0/0:11,0:11:27.05:0,27,279	1/1:8,8:16:20.94:172,21,0	1/1:6,9:15:26.96:221,27,0	1/1:5,11:17:37.99:301,38,0	1/1:6,9:15:35.94:295,36,0	1/1:3,11:15:34.99:277,35,0	1/1:5,12:17:38.94:320,39,0	1/1:6,13:19:38.89:313,39,0	1/1:6,11:17:29.96:246,30,0	1/1:5,5:10:17.97:147,18,0	1/1:5,10:17:37.01:282,37,0	1/1:5,6:11:11.98:98,12,0	1/1:4,8:13:26.45:198,26,0	1/1:3,9:12:14.95:123,15,0	1/1:2,9:11:32.96:270,33,0	1/1:5,9:15:19.99:154,20,0	1/1:6,4:10:20.96:172,21,0	1/1:6,12:18:35.95:296,36,0	1/1:10,17:27:47.93:394,48,0	1/1:0,7:7:11.99:99,12,0
chr10	19739969	.	CAG	C	1125.75	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.751;DP=734;FS=0.678;HRun=0;HaplotypeScore=99.8630;InbreedingCoeff=0.9480;MQ=56.55;MQ0=27;MQRankSum=-8.796;QD=26.80;ReadPosRankSum=-3.612;VQSLOD=3.6027;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:28:54.01:0,54,1039	0/0:8,0:8:20.97:0,21,301	0/0:47,0:5:12.04:0,12,189	0/0:70,0:10:15.01:0,15,116	0/0:19,0:18:48.15:0,48,771	0/0:30,0:30:81.28:0,81,1383	0/0:22,0:22:54.13:0,54,851	1/1:10,32:40:93.30:1221,93,0	0/0:24,0:24:66.23:0,66,1136	0/0:20,0:19:54.11:0,54,870	0/0:17,0:17:45.14:0,45,748	0/0:21,0:21:60.18:0,60,1004	0/0:23,0:23:63.22:0,63,1089	0/0:31,0:31:84.29:0,84,1439	0/0:28,0:28:63.20:0,63,1063	0/0:24,0:24:66.23:0,66,1138	0/0:24,0:24:63.17:0,63,1037	0/0:25,0:25:66.18:0,66,1054	0/0:21,0:21:48.14:0,48,774	0/0:19,0:19:48.13:0,48,749	0/0:28,0:27:72.23:0,72,1195	0/0:16,0:16:42.14:0,42,706	0/0:21,0:21:54.17:0,54,902	0/0:38,0:38:69.02:0,69,1183	0/0:23,0:23:60.19:0,60,1008	0/0:25,0:25:66.23:0,66,1137	0/0:30,0:30:87.29:0,87,1474	0/0:7,0:7:21.06:0,21,337
chr10	19740409	.	ACT	A	1053.87	PASS	AB=0.970;AC=21;AF=0.404;AN=52;BaseQRankSum=-2.723;DP=561;FS=20.724;HRun=0;HaplotypeScore=100.0055;InbreedingCoeff=-0.5370;MQ=55.23;MQ0=13;MQRankSum=2.066;QD=2.57;ReadPosRankSum=5.080;VQSLOD=-0.2275;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:18,4:22:12.71:13,0,182	0/0:12,0:12:24:0,24,258	./.	./.	0/1:25,1:29:33.69:34,0,379	0/1:24,0:24:66.18:66,0,258	0/1:22,0:22:75.06:75,0,173	0/0:37,0:37:8.93:0,9,63	0/1:11,0:11:37.92:38,0,123	0/1:15,0:15:30.43:61,0,30	0/1:27,0:25:48.22:80,0,48	0/1:20,0:20:44.83:88,0,45	0/1:30,0:30:12.10:168,0,12	0/0:12,0:12:13.27:0,13,99	0/0:15,0:16:12.58:0,13,436	0/0:9,0:8:12.01:0,12,115	0/1:13,0:13:6:6,0,22	0/1:14,0:14:11.57:20,0,12	1/1:27,0:26:2.03:121,2,0	0/1:16,0:15:43.82:44,0,104	0/1:29,1:29:88.61:104,0,89	0/1:13,0:13:20.24:50,0,20	0/1:19,0:19:9.92:76,0,10	0/1:17,0:16:78.46:78,0,122	0/1:17,1:19:19.82:20,0,416	0/1:23,0:22:35.12:35,0,260	0/1:15,4:19:26.18:26,0,205	0/0:13,0:13:12.01:0,12,139
chr10	19740443	.	T	TCA	3167.57	PASS	AB=0.785;AC=21;AF=0.375;AN=56;BaseQRankSum=7.837;DP=585;FS=0.402;HRun=0;HaplotypeScore=108.4604;InbreedingCoeff=0.4659;MQ=57.51;MQ0=19;MQRankSum=0.411;QD=11.31;ReadPosRankSum=2.523;VQSLOD=3.0813;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:18:32.51:0,33,380	0/0:11,0:11:33.07:0,33,427	0/0:29,0:11:23.68:0,24,192	0/0:29,0:7:1.32:0,1,43	0/0:27,0:27:49.65:0,50,632	0/0:23,0:23:56.87:0,57,594	0/0:20,0:20:43.02:0,43,445	0/0:25,0:25:65.84:0,66,575	0/0:18,0:18:39.37:0,39,391	0/1:20,2:22:7.95:286,0,8	1/1:19,4:22:12.27:334,12,0	1/1:18,4:22:19.21:360,19,0	0/1:23,3:26:9.33:288,0,9	0/1:9,2:11:7.40:146,0,7	0/0:20,0:20:35.25:0,35,602	1/1:13,0:12:22.98:193,23,0	0/1:8,7:16:29.17:120,0,29	0/1:3,14:17:7.84:86,0,8	0/1:20,0:19:37.60:174,0,38	1/1:21,0:21:29.66:326,30,0	1/1:31,4:33:24.79:438,25,0	1/1:12,0:12:17.73:241,18,0	0/1:7,11:18:20.89:81,0,21	1/1:22,2:23:8.56:291,9,0	0/0:23,0:23:68.82:0,69,791	0/0:21,0:20:53.74:0,54,556	0/0:28,0:29:71.70:0,72,692	0/0:11,0:10:20.99:0,21,245
chr10	19740812	.	G	GA	9763.15	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-14.103;DP=492;FS=2.999;HRun=5;HaplotypeScore=46.3349;InbreedingCoeff=0.9935;MQ=72.25;MQ0=0;MQRankSum=-1.512;QD=34.87;ReadPosRankSum=1.616;VQSLOD=4.9728;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:45.11:0,45,484	0/0:9,0:9:24.06:0,24,258	0/0:8,0:8:21.05:0,21,222	0/0:5,0:6:15.03:0,15,155	0/0:23,0:23:63.16:0,63,677	0/0:22,0:22:63.16:0,63,676	0/0:9,0:9:27.05:0,27,282	1/1:6,25:31:75.24:987,75,0	0/0:19,1:20:20.68:0,21,573	1/1:4,26:30:81.26:1065,81,0	1/1:1,24:25:69.14:869,69,0	1/1:0,14:14:39.13:513,39,0	1/1:2,22:24:60.06:790,60,0	1/1:1,16:17:48.16:632,48,0	0/0:20,0:20:51.11:0,51,539	1/1:1,13:14:33.11:434,33,0	1/1:3,16:18:48.16:630,48,0	1/1:1,15:16:45.15:592,45,0	1/1:1,13:14:42:528,42,0	1/1:1,23:24:69.22:908,69,0	1/1:1,10:11:27.09:355,27,0	1/1:1,10:11:30.10:395,30,0	1/1:0,14:14:39.13:513,39,0	1/1:1,15:16:42.14:553,42,0	0/0:20,0:20:51.11:0,51,539	0/0:21,1:22:14.65:0,15,509	0/0:24,0:24:69.17:0,69,741	0/0:11,0:11:33.08:0,33,354
chr10	19747735	.	T	TATAC	10473.05	PASS	AB=0.628;AC=23;AF=0.411;AN=56;BaseQRankSum=13.886;DP=651;FS=4.775;HRun=0;HaplotypeScore=117.8583;InbreedingCoeff=0.2897;MQ=64.48;MQ0=2;MQRankSum=-2.239;QD=26.25;ReadPosRankSum=4.319;VQSLOD=4.6947;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:30.46:0,30,755	0/0:13,0:13:36.06:0,36,587	0/0:27,0:16:17.92:0,18,480	0/1:21,0:16:33.21:33,0,424	0/0:34,0:35:96.22:0,96,1715	0/0:23,0:24:38.27:0,38,1134	0/0:9,0:10:27.06:0,27,434	0/1:15,0:38:99:849,0,214	0/0:18,0:18:54.15:0,54,994	0/1:5,1:29:39.31:1036,0,39	0/1:3,1:21:26.68:540,0,27	1/1:5,0:24:12.31:824,12,0	0/1:7,1:28:76.39:789,0,76	1/1:5,0:24:24.22:719,24,0	0/0:28,0:30:81.21:0,81,1439	1/1:1,0:12:7.15:412,7,0	1/1:3,1:33:31.37:1136,31,0	1/1:7,0:17:7.55:548,8,0	0/1:9,0:17:99:228,0,140	0/1:6,1:37:64.22:934,0,64	1/1:3,0:26:18.20:630,18,0	1/1:5,0:27:7.35:765,7,0	0/1:4,0:24:45.55:560,0,46	0/1:7,0:21:30.66:469,0,31	0/0:20,0:21:63.20:0,63,1173	0/0:23,0:23:66.20:0,66,1166	0/0:22,0:21:62.95:0,63,1089	0/0:11,0:11:33.09:0,33,618
chr10	19748032	.	T	TC	10272.66	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-14.469;DP=610;FS=17.201;HRun=3;HaplotypeScore=58.5320;InbreedingCoeff=0.9998;MQ=85.38;MQ0=0;MQRankSum=-2.252;QD=35.42;ReadPosRankSum=2.098;VQSLOD=3.3546;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,123,1406	0/0:14,0:14:42.10:0,42,489	0/0:17,0:17:44.44:0,44,463	0/0:23,0:23:47.18:0,47,560	0/0:22,0:22:63.18:0,63,743	0/0:23,0:23:63.19:0,63,754	0/0:22,0:22:57.10:0,57,647	0/0:26,0:26:75.21:0,75,879	0/0:14,0:14:42.08:0,42,486	1/1:1,19:20:57.19:798,57,0	1/1:2,13:15:36.12:504,36,0	1/1:0,20:20:48.16:672,48,0	1/1:1,13:14:33.11:461,33,0	1/1:1,27:28:75.25:1050,75,0	0/0:18,0:18:48.15:0,48,575	1/1:2,17:19:42.14:588,42,0	1/1:2,28:30:69.23:964,69,0	1/1:1,15:16:39.13:546,39,0	1/1:2,22:25:69:892,69,0	1/1:0,17:17:48.16:666,48,0	1/1:0,17:17:45.15:630,45,0	1/1:0,21:21:60.20:827,60,0	1/1:1,26:27:69.22:963,69,0	1/1:3,18:21:51.17:714,51,0	0/0:23,0:23:66.20:0,66,792	0/0:26,1:26:27.15:0,27,723	0/0:31,0:31:78.15:0,78,895	0/0:12,0:12:36.03:0,36,413
chr10	19750284	.	CT	C	1157.96	PASS	AB=0.731;AC=25;AF=0.446;AN=56;BaseQRankSum=3.164;DP=302;FS=1.904;HRun=14;HaplotypeScore=37.5093;InbreedingCoeff=0.5388;MQ=58.69;MQ0=19;MQRankSum=2.170;QD=7.77;ReadPosRankSum=0.614;VQSLOD=1.7875;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:15:23.78:0,24,193	0/0:8,0:8:18.02:0,18,167	0/0:6,0:6:6.01:0,6,55	0/1:6,0:5:11.59:12,0,38	0/0:23,1:24:24.40:0,24,352	0/0:10,0:10:26.96:0,27,236	0/0:4,0:4:6.01:0,6,56	0/0:13,0:12:20.99:0,21,187	0/0:4,0:3:3:0,3,28	0/1:5,9:13:1.08:138,0,1	1/1:1,6:8:10.87:67,11,0	1/1:4,3:7:8.90:62,9,0	0/1:4,3:6:15.98:50,0,16	1/1:3,4:8:13.93:88,14,0	0/0:6,0:4:3:0,3,28	1/1:3,5:7:14.85:103,15,0	1/1:4,4:7:14.87:103,15,0	0/1:6,4:10:13.01:67,0,13	1/1:7,4:10:13.92:88,14,0	1/1:2,7:9:17.78:123,18,0	1/1:8,7:14:23.77:164,24,0	0/1:5,6:10:13.98:54,0,14	1/1:4,8:12:21.87:135,22,0	1/1:5,6:10:14.78:103,15,0	0/0:13,0:14:23.86:0,24,210	0/0:16,1:15:6.45:0,6,202	0/0:13,1:15:12.29:0,12,245	0/0:13,1:12:3.22:0,3,144
chr10	19756221	.	GAGAGGCAC	G	2271.83	PASS	AB=1.000;AC=28;AF=0.519;AN=54;BaseQRankSum=6.414;DP=424;FS=3.814;HRun=0;HaplotypeScore=109.4085;InbreedingCoeff=0.5721;MQ=51.40;MQ0=18;MQRankSum=-6.346;QD=11.89;ReadPosRankSum=-0.127;VQSLOD=2.2575;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:6.60:0,7,194	0/1:6,0:6:4.85:5,0,65	0/0:31,0:8:17.14:0,17,125	0/0:52,0:12:14.65:0,15,131	0/0:17,0:16:22.36:0,22,184	0/0:12,0:12:4.02:0,4,92	0/0:23,0:23:21.41:0,21,265	1/1:6,0:19:27.30:394,27,0	0/1:21,0:20:15.26:15,0,254	1/1:10,0:10:19.79:300,20,0	1/1:2,4:6:3.01:55,3,0	1/1:1,11:12:9.03:209,9,0	1/1:3,13:15:9.03:169,9,0	1/1:2,7:9:5.99:94,6,0	0/0:12,0:11:20.92:0,21,220	1/1:9,2:10:27.02:485,27,0	1/1:2,16:17:9.03:190,9,0	1/1:12,0:11:15.03:250,15,0	1/1:6,0:5:9.03:171,9,0	./.	0/0:7,18:23:0.42:0,0,9	1/1:7,0:7:3.01:51,3,0	0/1:9,0:9:0:0,0,0	1/1:17,0:17:5.95:61,6,0	0/1:10,0:10:4.88:5,0,92	0/0:17,0:17:29.98:0,30,295	0/0:14,0:14:10.20:0,10,219	0/0:3,0:3:3.01:0,3,40
chr10	19756225	.	GGCAC	G	2038.07	PASS	AB=0.901;AC=29;AF=0.558;AN=52;BaseQRankSum=6.675;DP=387;FS=7.112;HRun=0;HaplotypeScore=88.8125;InbreedingCoeff=0.4470;MQ=51.93;MQ0=16;MQRankSum=-6.464;QD=10.61;ReadPosRankSum=0.372;VQSLOD=2.0590;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,3:22:6.11:0,6,195	0/1:5,0:5:1.05:1,0,65	0/0:29,0:7:17.30:0,17,124	0/0:51,0:11:13.86:0,14,133	0/0:13,2:14:19.83:0,20,136	0/1:9,1:10:5.87:6,0,87	0/0:19,2:21:29.67:0,30,257	1/1:19,0:16:36.66:396,37,0	0/1:16,3:18:15.27:15,0,228	1/1:3,4:7:14.81:284,15,0	1/1:4,0:4:3.01:55,3,0	1/1:11,0:11:9.02:104,9,0	1/1:16,0:15:8.96:79,9,0	1/1:8,0:8:5.99:74,6,0	0/0:11,0:10:20.91:0,21,195	1/1:4,6:10:30.02:470,30,0	1/1:18,0:17:9:88,9,0	1/1:1,9:10:15.03:230,15,0	1/1:3,3:5:12.04:205,12,0	./.	0/0:20,0:20:2.49:0,2,12	1/1:2,5:7:2.86:51,3,0	./.	1/1:3,11:14:5.99:49,6,0	0/1:8,1:11:63.89:64,0,89	0/1:16,1:17:42.46:42,0,249	0/0:13,0:13:3.13:0,3,169	0/0:2,0:2:3.01:0,3,33
chr10	19757075	.	C	CT	1298.23	PASS	AB=0.885;AC=13;AF=0.232;AN=56;BaseQRankSum=-5.659;DP=476;FS=4.733;HRun=12;HaplotypeScore=53.2153;InbreedingCoeff=0.3557;MQ=76.00;MQ0=0;MQRankSum=0.393;QD=7.96;ReadPosRankSum=1.154;VQSLOD=2.1213;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:62.53:0,63,455	0/0:6,0:6:14.91:0,15,109	0/0:19,0:13:8.52:0,9,58	0/1:13,1:14:19.56:20,0,46	0/0:16,2:19:5.50:0,5,181	1/1:1,28:31:52.91:648,53,0	0/1:6,13:20:4.92:267,0,5	0/0:26,1:29:33.57:0,34,381	1/1:5,9:14:24.04:233,24,0	0/0:24,0:24:31.39:0,31,331	0/0:18,0:22:44.83:0,45,302	0/0:18,0:18:35.67:0,36,258	0/0:24,0:24:61.64:0,62,440	0/1:11,1:12:5.19:5,0,129	1/1:4,14:18:27.04:263,27,0	0/0:11,0:11:29.83:0,30,219	0/0:14,0:15:43.76:0,44,309	0/0:6,0:6:13.75:0,14,93	0/0:15,0:17:5.43:0,5,161	0/1:20,2:22:5.53:6,0,276	0/0:10,0:11:9.47:0,9,139	0/1:9,0:9:2.66:3,0,110	0/0:15,1:17:8.64:0,9,217	0/1:9,1:10:2.34:2,0,147	0/1:10,1:11:11.29:11,0,91	0/0:15,0:15:41.13:0,41,291	0/0:24,0:26:54.69:0,55,381	0/0:8,0:8:20.88:0,21,153
chr10	19761740	.	GTTT	G	5092.02	PASS	AB=0.714;AC=14;AF=0.250;AN=56;BaseQRankSum=17.084;DP=639;FS=3.630;HRun=3;HaplotypeScore=192.0852;InbreedingCoeff=-0.3312;MQ=49.96;MQ0=5;MQRankSum=-14.003;QD=16.06;ReadPosRankSum=9.233;VQSLOD=0.9694;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:75.82:0,76,1397	0/0:11,0:11:33.10:0,33,655	0/0:19,0:13:33.54:0,34,542	0/0:23,0:14:35.85:0,36,631	0/0:29,0:29:87.12:0,87,1661	0/0:29,0:29:67.50:0,67,1328	0/0:14,0:14:41.99:0,42,743	0/0:36,0:36:99:0,108,2036	0/0:25,0:25:75.08:0,75,1362	0/1:17,12:28:99:533,0,120	0/1:9,20:29:99:484,0,138	0/1:10,17:27:99:514,0,188	0/1:14,17:31:99:570,0,208	0/1:9,10:19:98.26:355,0,98	0/0:33,0:32:98.77:0,99,1749	0/1:8,12:20:82.31:366,0,82	0/1:13,4:17:99:215,0,104	0/1:14,6:20:99:325,0,122	0/1:12,2:12:77.67:78,0,138	0/1:11,13:24:17.47:412,0,17	0/1:7,1:8:43.08:43,0,68	0/1:13,12:25:99:362,0,199	0/1:23,19:42:99:720,0,172	0/1:9,3:12:67.03:115,0,67	0/0:21,0:21:63.21:0,63,1304	0/0:19,1:20:27.55:0,28,901	0/0:28,0:28:83.86:0,84,1837	0/0:6,0:6:17.85:0,18,292
chr10	19761744	.	GTTTGT	G	5681.49	PASS	AB=0.711;AC=14;AF=0.250;AN=56;BaseQRankSum=18.597;DP=634;FS=8.314;HRun=0;HaplotypeScore=215.8035;InbreedingCoeff=-0.3336;MQ=51.72;MQ0=5;MQRankSum=-14.568;QD=18.15;ReadPosRankSum=10.433;VQSLOD=2.3346;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:27:73.94:0,74,1567	0/0:11,0:11:33.11:0,33,787	0/0:19,0:13:30.10:0,30,584	0/0:25,0:17:38.14:0,38,775	0/0:27,0:27:81.22:0,81,1908	0/0:29,0:29:82.13:0,82,1687	0/0:12,0:12:36.08:0,36,808	0/0:37,0:37:99:0,108,2334	0/0:22,0:22:66.17:0,66,1526	0/1:16,12:27:42.14:637,0,42	0/1:11,20:31:64.36:614,0,64	0/1:11,17:28:27.76:650,0,28	0/1:13,17:30:92.50:619,0,93	0/1:10,10:20:90.66:385,0,91	0/0:31,0:30:89.92:0,90,1943	0/1:8,12:20:46.79:452,0,47	0/1:14,4:18:99:176,0,139	0/1:12,6:18:71.95:330,0,72	0/1:10,2:10:61.36:61,0,66	0/1:12,13:25:36.20:462,0,36	0/1:6,1:7:26.16:26,0,62	0/1:11,12:23:63.41:418,0,63	0/1:22,19:41:93.96:760,0,94	0/1:9,3:12:69.60:91,0,70	0/0:21,0:21:63.21:0,63,1571	0/0:21,1:22:26.76:0,27,1163	0/0:30,0:30:90.24:0,90,2344	0/0:6,0:6:17.96:0,18,339
chr10	19765624	.	GCT	G	11416.96	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=19.746;DP=631;FS=1.303;HRun=0;HaplotypeScore=137.2915;InbreedingCoeff=0.9925;MQ=82.16;MQ0=0;MQRankSum=-7.135;QD=35.68;ReadPosRankSum=1.982;VQSLOD=6.6408;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:96.33:0,96,1873	0/0:7,0:7:18.06:0,18,352	0/0:20,0:20:60.20:0,60,1067	0/0:18,0:18:51.15:0,51,957	0/0:21,0:21:63.20:0,63,1175	0/0:19,0:19:57.20:0,57,1120	0/0:25,0:25:75.24:0,75,1405	0/0:33,0:33:99:0,99,1898	0/0:24,0:24:72.25:0,72,1406	1/1:2,15:17:44.02:603,44,0	1/1:3,13:16:42.14:582,42,0	1/1:3,19:22:66.21:896,66,0	1/1:4,33:37:99:1453,107,0	1/1:2,26:28:80.66:1075,81,0	0/0:33,0:33:96.33:0,96,1877	1/1:6,18:24:63.03:823,63,0	1/1:2,20:22:66.13:886,66,0	1/1:0,6:6:15.05:203,15,0	1/1:3,15:18:42.50:573,42,0	1/1:1,17:18:48.16:663,48,0	1/1:2,30:32:71.71:989,72,0	1/1:8,18:26:65.57:907,66,0	1/1:1,29:30:71.63:975,72,0	1/1:3,21:24:56.69:789,57,0	0/0:20,0:20:60.21:0,60,1168	0/0:22,0:22:66.23:0,66,1298	0/0:33,0:32:99:0,99,1922	0/0:4,0:4:12.04:0,12,236
chr10	19765630	.	GGT	G	4984.77	PASS	AB=1.000;AC=26;AF=0.464;AN=56;BaseQRankSum=19.523;DP=648;FS=1.636;HRun=0;HaplotypeScore=162.8046;InbreedingCoeff=0.8694;MQ=80.73;MQ0=0;MQRankSum=-6.087;QD=15.43;ReadPosRankSum=5.324;VQSLOD=4.9487;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,105,1989	0/0:6,0:6:15.02:0,15,266	0/0:19,0:19:57.19:0,57,1105	0/0:20,0:20:60.11:0,60,1057	0/0:22,0:22:66.19:0,66,1256	0/0:24,0:24:72.19:0,72,1272	0/0:23,0:23:58.14:0,58,1328	0/0:30,0:30:90.31:0,90,1828	0/0:24,0:24:72.23:0,72,1411	0/1:19,0:19:2.70:232,0,3	1/1:14,1:15:41.60:330,42,0	1/1:23,0:23:24.48:338,24,0	1/1:36,0:36:66.69:595,67,0	1/1:30,0:30:21.87:417,22,0	0/0:34,0:34:99:0,102,2005	1/1:21,0:21:50.07:334,50,0	1/1:24,0:24:22.35:356,22,0	1/1:7,0:7:9.29:97,9,0	0/1:21,0:21:81.44:209,0,81	1/1:18,0:18:25.35:299,25,0	1/1:31,0:31:49.42:425,49,0	1/1:20,6:26:63.41:565,63,0	1/1:29,0:29:30.80:448,31,0	1/1:23,0:23:54.37:339,54,0	0/0:21,0:21:63.20:0,63,1212	0/0:28,0:28:84.24:0,84,1641	0/0:33,0:32:99:0,99,1934	0/0:6,0:6:18.03:0,18,285
chr10	19765708	.	AG	A	9988.62	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=14.813;DP=598;FS=1.754;HRun=4;HaplotypeScore=87.6233;InbreedingCoeff=0.9970;MQ=80.78;MQ0=0;MQRankSum=-1.963;QD=32.97;ReadPosRankSum=3.339;VQSLOD=5.3708;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:87.25:0,87,1166	0/0:10,0:10:30.10:0,30,420	0/0:15,0:15:41.95:0,42,466	0/0:18,0:18:13.79:0,14,257	0/0:24,0:24:72.24:0,72,999	0/0:22,0:22:63.18:0,63,848	0/0:16,0:16:45.09:0,45,590	0/0:26,0:26:78.26:0,78,1092	0/0:15,0:15:42.13:0,42,571	1/1:4,14:18:51.14:598,51,0	1/1:1,12:13:39.12:462,39,0	1/1:2,25:27:81.22:949,81,0	1/1:2,24:26:78.21:912,78,0	1/1:4,25:29:78.22:921,78,0	0/0:34,0:34:99:0,102,1428	1/1:0,21:21:56.83:684,57,0	1/1:3,23:26:69.19:814,69,0	1/1:0,13:13:39.12:468,39,0	1/1:5,19:24:63.15:734,63,0	1/1:1,13:14:39.12:467,39,0	1/1:0,26:26:69.21:827,69,0	1/1:2,23:25:66.20:786,66,0	1/1:2,16:18:48.15:576,48,0	1/1:3,20:23:66.20:791,66,0	0/0:13,0:13:36.12:0,36,501	0/0:19,0:19:54.17:0,54,740	0/0:40,0:40:99:0,120,1680	0/0:14,0:14:39.13:0,39,546
chr10	19765712	.	GT	G	3162.83	PASS	AB=1.000;AC=27;AF=0.482;AN=56;BaseQRankSum=17.973;DP=599;FS=3.015;HRun=1;HaplotypeScore=106.2378;InbreedingCoeff=0.9105;MQ=81.52;MQ0=0;MQRankSum=-2.923;QD=10.65;ReadPosRankSum=4.781;VQSLOD=1.9852;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:90.24:0,90,1309	0/0:10,0:10:30.10:0,30,469	0/0:15,0:15:34.30:0,34,419	0/0:19,0:19:7.41:0,7,295	0/0:26,0:26:78.13:0,78,1123	0/0:22,0:22:63.16:0,63,951	0/0:16,0:16:48.13:0,48,689	0/0:27,0:27:81.27:0,81,1233	0/0:14,0:14:42.13:0,42,634	1/1:17,1:18:19.16:140,19,0	1/1:13,1:14:15.30:152,15,0	1/1:26,0:26:48.87:302,49,0	1/1:25,0:25:43.90:273,44,0	1/1:25,1:26:69.95:363,70,0	0/0:36,0:36:99:0,108,1644	1/1:21,0:21:51.48:233,51,0	1/1:23,0:23:61.15:291,61,0	1/1:13,0:13:35.71:161,36,0	1/1:21,3:24:6.17:239,6,0	0/1:15,0:15:7.34:133,0,7	1/1:27,0:27:43.64:293,44,0	1/1:23,2:25:61.59:362,62,0	1/1:16,0:16:43.97:208,44,0	1/1:24,0:24:17.88:238,18,0	0/0:14,0:14:42.07:0,42,577	0/0:17,0:17:51.17:0,51,772	0/0:40,0:40:99:0,120,1864	0/0:14,0:14:39.13:0,39,610
chr10	19766991	.	GA	G	565.37	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=1.461;DP=563;FS=3.899;HRun=8;HaplotypeScore=65.6424;InbreedingCoeff=0.9595;MQ=72.94;MQ0=0;MQRankSum=-2.496;QD=22.61;ReadPosRankSum=-3.151;VQSLOD=2.8328;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:60.16:0,60,701	0/0:11,0:11:30.08:0,30,351	0/0:11,0:11:26.67:0,27,295	0/0:7,0:7:18.03:0,18,190	0/0:35,0:35:96.29:0,96,1155	0/0:26,0:26:75.22:0,75,895	0/0:15,0:15:30.05:0,30,346	1/1:2,23:25:69.09:660,69,0	0/0:18,0:18:54.14:0,54,629	0/0:27,0:27:66.20:0,66,797	0/0:29,0:29:78.23:0,78,925	0/0:21,0:21:63.14:0,63,734	0/0:18,0:18:54.14:0,54,633	0/0:21,0:21:63.19:0,63,761	0/0:22,0:22:36.23:0,36,687	0/0:19,0:19:48.12:0,48,556	0/0:28,0:28:81.23:0,81,965	0/0:11,0:11:27.08:0,27,326	0/0:23,0:23:60.16:0,60,705	0/0:28,0:28:84.24:0,84,993	0/0:17,0:17:42.13:0,42,507	0/0:28,0:28:75.23:0,75,906	0/0:17,0:17:51.16:0,51,616	0/0:12,0:12:36.06:0,36,407	0/0:14,0:14:42.13:0,42,507	0/0:28,0:28:84.23:0,84,985	0/0:24,0:24:66.19:0,66,787	0/0:4,0:4:12.04:0,12,145
chr10	19767468	.	G	GCA	806.88	PASS	AB=0.771;AC=6;AF=0.107;AN=56;BaseQRankSum=5.816;DP=673;FS=8.905;HRun=0;HaplotypeScore=148.8476;InbreedingCoeff=-0.1391;MQ=60.40;MQ0=0;MQRankSum=-6.382;QD=5.98;ReadPosRankSum=0.209;VQSLOD=2.5591;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,99,1565	0/0:10,0:10:30.10:0,30,488	0/0:42,0:35:97.60:0,98,1503	0/0:43,0:38:95.50:0,96,1578	0/0:22,0:22:66.23:0,66,1071	0/0:21,0:21:60.20:0,60,967	0/0:18,0:18:54.17:0,54,840	0/0:26,0:26:75.24:0,75,1148	0/0:19,0:19:54.16:0,54,841	0/1:16,10:25:99:498,0,455	0/0:10,4:14:3.01:0,3,38	0/0:17,11:29:8.82:0,9,117	0/1:13,11:24:72.86:73,0,141	0/0:10,13:23:12.04:0,12,178	0/0:31,0:31:87.26:0,87,1365	0/1:12,14:26:79.78:80,0,97	0/0:14,8:21:14.81:0,15,149	0/1:19,2:21:74.56:75,0,349	0/1:13,4:17:99:151,0,397	0/0:13,6:19:12.02:0,12,155	0/1:17,3:19:38.82:54,0,39	0/0:20,10:30:12.01:0,12,147	0/0:16,6:21:18.03:0,18,233	0/0:22,7:29:12.43:0,12,124	0/0:26,0:26:78.27:0,78,1267	0/0:30,0:30:87.18:0,87,1355	0/0:24,0:24:72.25:0,72,1171	0/0:3,0:3:9.03:0,9,143
chr10	19768532	.	AC	A	14187.55	PASS	AB=0.853;AC=29;AF=0.518;AN=56;BaseQRankSum=15.162;DP=776;FS=6.254;HRun=3;HaplotypeScore=82.4052;InbreedingCoeff=0.9279;MQ=69.90;MQ0=1;MQRankSum=-3.308;QD=32.62;ReadPosRankSum=3.787;VQSLOD=5.3196;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:33:89.61:0,90,1306	0/0:8,0:8:24.05:0,24,322	0/0:22,0:20:39.13:0,39,696	0/1:24,5:28:89.73:90,0,746	0/0:26,0:26:75.25:0,75,1079	0/0:21,0:21:63.19:0,63,886	0/0:26,0:26:72.24:0,72,1036	0/0:26,0:26:72.23:0,72,1002	0/0:24,0:24:72.23:0,72,1019	1/1:1,26:27:78.24:967,78,0	1/1:1,27:28:75.19:912,75,0	1/1:1,43:44:99:1562,126,0	1/1:1,39:40:99:1413,114,0	1/1:1,28:30:87.27:1072,87,0	0/0:45,0:45:99:0,132,1855	1/1:0,39:39:99:1339,108,0	1/1:0,21:21:60.19:744,60,0	1/1:0,21:21:60.19:743,60,0	1/1:4,16:20:48.14:585,48,0	1/1:1,30:31:87.27:1075,87,0	1/1:0,34:34:96.30:1190,96,0	1/1:0,31:31:90.28:1116,90,0	1/1:0,25:25:72.23:892,72,0	1/1:2,13:15:40.94:489,41,0	0/0:32,0:32:96.29:0,96,1328	0/0:29,1:29:44.03:0,44,1018	0/0:40,0:40:99:0,120,1688	0/0:8,0:8:24.08:0,24,345
chr10	19769839	.	CTG	C	672.62	PASS	AB=0.983;AC=18;AF=0.321;AN=56;BaseQRankSum=14.160;DP=681;FS=1.245;HRun=0;HaplotypeScore=161.5837;InbreedingCoeff=-0.3503;MQ=52.40;MQ0=3;MQRankSum=-11.932;QD=1.67;ReadPosRankSum=1.809;VQSLOD=2.7242;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:66.46:0,66,1527	0/0:8,0:8:24.07:0,24,358	0/0:38,0:21:39.07:0,39,537	0/0:36,1:22:0.93:0,1,577	0/0:29,1:30:29.55:0,30,943	0/1:15,0:15:45.68:46,0,289	0/0:25,0:25:63.21:0,63,1014	0/1:24,0:24:18.72:19,0,653	0/0:31,0:31:50.79:0,51,1263	0/1:23,0:23:33.67:34,0,224	0/1:25,0:26:58.87:59,0,224	0/1:26,0:26:96.96:97,0,141	0/1:20,0:20:80.01:80,0,96	0/1:23,0:23:63.50:64,0,149	0/0:22,2:24:20.49:0,20,776	0/1:28,0:28:83.65:84,0,240	1/1:17,1:17:8.53:42,9,0	0/1:16,0:15:49.41:49,0,133	0/1:20,1:21:19.42:19,0,310	0/1:23,0:23:54.20:54,0,136	0/0:22,0:22:9.51:0,10,111	0/1:25,0:25:42.50:43,0,278	0/1:25,0:25:55.22:55,0,128	0/1:37,0:37:41.58:42,0,226	0/0:20,0:20:48.15:0,48,753	0/1:30,2:32:4.12:4,0,940	0/1:18,3:21:42.04:42,0,598	0/0:5,0:5:3.01:0,3,49
chr10	19769858	.	CGTGTGT	C	6671.32	PASS	AB=0.840;AC=25;AF=0.446;AN=56;BaseQRankSum=16.022;DP=686;FS=4.112;HRun=0;HaplotypeScore=200.4763;InbreedingCoeff=0.7757;MQ=48.99;MQ0=8;MQRankSum=-10.690;QD=20.40;ReadPosRankSum=4.565;VQSLOD=4.3964;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,132,3860	0/0:12,0:12:33.11:0,33,852	0/0:43,0:22:63.02:0,63,1257	0/0:45,0:21:53.10:0,53,1139	0/0:26,0:26:75.21:0,75,2059	0/0:13,0:13:27.07:0,27,761	0/0:26,0:26:72.25:0,72,2250	0/0:21,0:21:60.17:0,60,1394	0/0:31,0:31:87.28:0,87,2762	1/1:13,6:19:17.51:378,18,0	1/1:19,9:28:41.09:570,41,0	1/1:17,13:30:44.90:686,45,0	1/1:9,10:19:48:638,48,0	1/1:14,9:23:39.51:561,40,0	0/0:25,0:25:66.17:0,66,1954	1/1:17,12:29:48.97:663,49,0	0/1:16,3:18:3.49:228,0,3	0/1:12,5:16:86.16:227,0,86	0/1:13,2:15:79.96:137,0,80	1/1:10,12:22:27.45:671,27,0	1/1:24,0:24:15.82:155,16,0	1/1:14,9:23:37.15:733,37,0	1/1:14,8:22:13.30:445,13,0	1/1:25,12:37:42.41:579,42,0	0/0:17,0:17:51.15:0,51,1602	0/0:29,0:29:78.25:0,78,2258	0/0:22,0:22:66.21:0,66,1748	0/0:1,0:1:3.01:0,3,107
chr10	19769869	.	GTGCA	G	4724.06	PASS	AB=0.767;AC=22;AF=0.393;AN=56;BaseQRankSum=16.172;DP=683;FS=5.135;HRun=0;HaplotypeScore=186.4484;InbreedingCoeff=0.5083;MQ=54.14;MQ0=8;MQRankSum=-9.816;QD=14.63;ReadPosRankSum=3.851;VQSLOD=4.3471;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,132,3145	0/0:12,0:12:33.10:0,33,789	0/0:46,0:25:59.77:0,60,1276	0/0:45,0:20:44.61:0,45,876	0/0:23,0:23:63.19:0,63,1584	0/0:13,0:13:24.08:0,24,550	0/0:29,0:29:78.22:0,78,1767	0/0:20,0:20:57.17:0,57,1179	0/0:32,0:32:93.28:0,93,2316	1/1:12,6:18:35.28:294,35,0	1/1:16,8:24:43.76:480,44,0	1/1:17,13:30:20.03:559,20,0	0/1:13,10:23:4.26:425,0,4	0/1:17,8:26:35.42:380,0,35	0/0:25,0:25:75.24:0,75,1854	1/1:14,12:26:25.63:418,26,0	0/1:20,3:22:13.25:182,0,13	0/1:8,5:12:21.15:186,0,21	0/1:10,2:12:46.60:101,0,47	1/1:12,12:24:14.84:494,15,0	1/1:23,0:23:9.12:93,9,0	0/1:12,9:21:24.88:417,0,25	1/1:12,8:20:6.14:302,6,0	1/1:28,12:40:5.48:392,5,0	0/0:16,0:16:48.15:0,48,1130	0/0:27,0:27:81.28:0,81,2093	0/0:23,0:23:69.22:0,69,1705	0/0:1,0:1:3.01:0,3,82
chr10	19771918	.	T	TA	6441.54	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-11.548;DP=621;FS=2.407;HRun=10;HaplotypeScore=63.3085;InbreedingCoeff=0.9862;MQ=79.93;MQ0=0;MQRankSum=-0.786;QD=21.62;ReadPosRankSum=2.753;VQSLOD=5.9353;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,108,882	0/0:9,0:9:23.93:0,24,191	0/0:18,0:18:15.56:0,16,152	0/0:14,0:14:8.09:0,8,185	0/0:33,0:33:83.84:0,84,686	0/0:22,0:22:50.91:0,51,416	0/0:22,0:22:50.88:0,51,412	0/0:27,0:27:56.90:0,57,467	0/0:22,0:22:41.91:0,42,345	1/1:7,21:28:60.13:624,60,0	1/1:4,11:16:35.88:350,36,0	1/1:4,14:18:36.09:384,36,0	1/1:5,20:25:23.47:455,23,0	1/1:5,25:30:59.98:622,60,0	0/0:29,0:29:59.89:0,60,492	1/1:3,24:27:54.14:576,54,0	1/1:5,22:27:35.51:583,36,0	1/1:0,12:12:21.05:224,21,0	1/1:4,15:19:45.07:456,45,0	1/1:2,19:22:47.92:483,48,0	1/1:3,18:22:23.31:438,23,0	1/1:2,20:23:50.92:514,51,0	1/1:3,9:14:26.80:253,27,0	1/1:0,15:15:45.11:480,45,0	0/0:19,0:19:53.92:0,54,443	0/0:32,1:33:39.87:0,40,535	0/0:25,0:24:62.87:0,63,514	0/0:7,0:7:20.98:0,21,172
chr10	19772419	.	TG	T	15714	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=14.819;DP=758;FS=0.000;HRun=1;HaplotypeScore=78.5901;InbreedingCoeff=0.9905;MQ=80.71;MQ0=0;MQRankSum=-1.026;QD=38.05;ReadPosRankSum=3.698;VQSLOD=5.3568;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,144,2078	0/0:5,0:5:15.05:0,15,235	0/0:14,0:14:42.14:0,42,651	0/0:25,0:25:71.61:0,72,932	0/0:31,0:31:92.64:0,93,1366	0/0:18,0:18:54.18:0,54,842	0/0:26,0:26:75.22:0,75,1128	0/0:24,0:23:72.20:0,72,1080	0/0:12,0:12:36.11:0,36,539	1/1:0,35:35:99:1372,102,0	1/1:0,28:28:81.10:1063,81,0	1/1:0,33:33:96.32:1342,96,0	1/1:0,28:28:66.22:922,66,0	1/1:0,20:20:57.19:797,57,0	0/0:24,0:24:72.22:0,72,1099	1/1:0,28:28:72.24:1007,72,0	1/1:0,41:41:99:1426,102,0	1/1:0,30:30:87.29:1216,87,0	1/1:0,22:22:66.22:923,66,0	1/1:1,26:27:81.26:1117,81,0	1/1:0,22:22:54.18:755,54,0	1/1:0,28:28:72.24:1007,72,0	1/1:0,40:40:99:1509,108,0	1/1:0,31:31:90.30:1258,90,0	0/0:29,0:29:84.27:0,84,1279	0/0:29,2:31:9.40:0,9,1257	0/0:42,0:42:99:0,126,1895	0/0:16,0:16:48.11:0,48,702
chr10	19773098	.	TTC	T	1881.08	PASS	AB=0.987;AC=30;AF=0.536;AN=56;BaseQRankSum=8.576;DP=564;FS=16.489;HRun=0;HaplotypeScore=159.5959;InbreedingCoeff=-0.1808;MQ=73.05;MQ0=0;MQRankSum=-7.603;QD=4.35;ReadPosRankSum=0.311;VQSLOD=2.0963;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:4.86:0,5,544	0/1:4,0:4:13.91:14,0,29	0/0:21,0:17:31.69:0,32,484	0/0:21,0:19:44.42:0,44,441	0/1:26,0:26:11.96:12,0,231	0/1:20,0:20:82.44:82,0,169	0/1:19,0:19:18.16:18,0,164	0/0:23,0:23:2.65:0,3,290	0/1:16,0:16:35.54:36,0,95	0/1:22,1:23:4.71:176,0,5	0/1:18,0:18:20.41:88,0,20	0/1:21,1:22:31.05:157,0,31	1/1:15,4:19:44.64:292,45,0	1/1:16,0:16:10.73:100,11,0	0/1:15,0:15:18.11:18,0,145	0/1:21,1:22:8.79:152,0,9	1/1:16,1:17:31.72:131,32,0	1/1:15,1:16:35.26:208,35,0	1/1:12,0:12:4.48:108,4,0	0/1:25,0:23:43.43:120,0,43	0/1:5,0:5:12.28:12,0,16	0/1:15,0:15:11.59:12,0,96	1/1:25,0:25:4.80:165,5,0	1/1:10,0:10:14.25:41,14,0	0/0:23,0:23:7.67:0,8,295	0/1:23,1:24:76.25:76,0,193	0/1:35,0:35:4.27:4,0,396	0/1:27,1:28:29.14:29,0,278
chr10	19773099	.	TC	T	7854.39	PASS	AB=0.938;AC=45;AF=0.804;AN=56;BaseQRankSum=-2.176;DP=553;FS=1.291;HRun=3;HaplotypeScore=129.0924;InbreedingCoeff=0.1937;MQ=73.56;MQ0=0;MQRankSum=-7.434;QD=15.37;ReadPosRankSum=-3.516;VQSLOD=3.3606;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:43,1:44:58.04:106,0,58	1/1:4,0:4:2.02:39,2,0	0/0:21,0:17:39.64:0,40,371	0/0:21,0:19:14.80:0,15,316	0/1:24,3:27:10.30:198,0,10	0/1:19,1:20:4.59:173,0,5	1/1:19,2:21:6.23:208,6,0	0/1:20,0:20:39.40:62,0,39	1/1:12,2:14:22.03:209,22,0	1/1:9,13:22:53.59:535,54,0	1/1:5,13:18:37.33:470,37,0	1/1:8,13:21:47.14:541,47,0	1/1:8,11:19:56.51:523,57,0	1/1:4,11:15:41.98:456,42,0	0/1:13,2:15:3.99:99,0,4	1/1:10,12:22:58.97:588,59,0	1/1:5,11:16:41.89:438,42,0	1/1:8,7:15:41.82:398,42,0	1/1:7,4:11:32.93:317,33,0	1/1:10,13:21:53.31:498,53,0	1/1:1,4:5:11.89:96,12,0	1/1:6,9:15:17.81:306,18,0	1/1:11,14:25:59.10:651,59,0	1/1:1,9:10:24.06:278,24,0	0/1:22,1:23:8.65:88,0,9	1/1:22,2:24:15.74:203,16,0	0/1:31,4:35:37.96:214,0,38	1/1:24,3:27:5.71:159,6,0
chr10	19773130	.	AGGTAACT	A	15777.75	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=14.421;DP=498;FS=4.616;HRun=0;HaplotypeScore=163.4785;InbreedingCoeff=0.9838;MQ=81.16;MQ0=0;MQRankSum=-17.329;QD=78.11;ReadPosRankSum=3.249;VQSLOD=5.4966;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:81.28:0,81,3290	0/0:7,0:7:21.07:0,21,881	0/0:17,0:18:33.89:0,34,1826	0/0:26,0:24:69.06:0,69,2375	0/0:25,0:25:75.26:0,75,3012	0/0:16,0:16:48.16:0,48,1999	0/0:25,0:25:75.26:0,75,2976	0/0:25,0:25:75.26:0,75,3021	0/0:14,0:14:42.14:0,42,1656	1/1:2,19:21:60.21:1649,60,0	1/1:0,15:15:42.14:1172,42,0	1/1:0,17:17:51.18:1424,51,0	1/1:0,16:16:48.16:1340,48,0	1/1:0,17:17:51.18:1424,51,0	0/0:22,0:22:66.23:0,66,2584	1/1:0,22:22:66.23:1843,66,0	1/1:0,11:11:30.10:836,30,0	1/1:1,15:16:48.12:1277,48,0	1/1:1,10:11:33.11:877,33,0	1/1:1,18:18:54.19:1485,54,0	1/1:0,3:3:6.02:168,6,0	1/1:0,10:10:30.10:838,30,0	1/1:0,13:13:36.12:1005,36,0	1/1:1,10:11:18.02:439,18,0	0/0:16,0:16:48.16:0,48,1950	0/0:21,0:21:63.21:0,63,2526	0/0:27,0:27:81.28:0,81,3265	0/0:27,0:27:81.28:0,81,3356
chr10	19773202	.	TA	T	6931.11	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=13.609;DP=557;FS=11.558;HRun=6;HaplotypeScore=89.5898;InbreedingCoeff=0.9996;MQ=80.52;MQ0=0;MQRankSum=-6.099;QD=26.35;ReadPosRankSum=2.055;VQSLOD=4.4696;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:45.15:0,45,592	0/0:10,0:10:30.10:0,30,395	0/0:26,0:25:64.07:0,64,733	0/0:17,0:17:39.06:0,39,453	0/0:15,0:15:45.15:0,45,592	0/0:16,0:16:48.16:0,48,632	0/0:14,0:14:39.11:0,39,498	0/0:33,0:33:90.26:0,90,1132	0/0:17,0:17:48.16:0,48,632	1/1:2,20:22:57.14:612,57,0	1/1:1,14:15:39.09:411,39,0	1/1:4,24:28:72.18:773,72,0	1/1:1,16:17:48.11:510,48,0	1/1:7,10:17:36.07:378,36,0	0/0:21,0:21:57.16:0,57,721	1/1:1,21:22:63.16:677,63,0	1/1:4,14:18:36.09:386,36,0	1/1:6,11:17:39.05:405,39,0	1/1:2,17:19:51.06:524,51,0	1/1:4,14:18:39.10:419,39,0	1/1:0,8:8:24.06:258,24,0	1/1:0,17:15:39.10:419,39,0	1/1:5,18:23:51.12:546,51,0	1/1:1,21:22:57.14:612,57,0	0/0:32,0:32:93.28:0,93,1206	0/0:29,1:30:55.04:0,55,1048	0/0:23,0:23:66.21:0,66,869	0/0:24,0:24:69.22:0,69,908
chr10	19773438	.	G	GT	8191.85	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-6.027;DP=619;FS=3.920;HRun=8;HaplotypeScore=68.2586;InbreedingCoeff=0.9916;MQ=73.55;MQ0=0;MQRankSum=-5.534;QD=29.47;ReadPosRankSum=0.860;VQSLOD=4.9461;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:60,0:60:99:0,159,1421	0/0:3,0:3:9:0,9,82	0/0:22,0:22:34.80:0,35,397	0/0:15,0:15:23.75:0,24,203	0/0:21,0:21:39:0,39,357	0/0:28,0:28:78.01:0,78,708	0/0:21,0:21:48.02:0,48,439	0/0:30,0:30:66.01:0,66,600	0/0:25,0:25:72.04:0,72,659	1/1:4,17:20:51.13:573,51,0	1/1:2,11:13:36.02:378,36,0	1/1:2,23:25:72.18:817,72,0	1/1:6,16:24:51.13:567,51,0	1/1:1,28:29:72.21:831,72,0	0/0:34,1:35:64.41:0,64,838	1/1:1,20:21:57.17:658,57,0	1/1:2,19:21:54.15:615,54,0	1/1:4,15:19:48.14:554,48,0	1/1:1,17:18:48.14:553,48,0	1/1:2,10:12:33.10:380,33,0	1/1:0,25:25:72.21:831,72,0	1/1:1,10:11:33.05:363,33,0	1/1:2,15:17:39.12:450,39,0	1/1:1,21:22:54.16:623,54,0	0/0:25,0:25:60.03:0,60,549	0/0:22,0:22:63.02:0,63,571	0/0:19,0:19:54.03:0,54,494	0/0:14,0:14:39.02:0,39,357
chr10	19776004	.	A	AC	9670.64	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=20.441;DP=668;FS=2.392;HRun=0;HaplotypeScore=135.4250;InbreedingCoeff=0.9988;MQ=75.07;MQ0=0;MQRankSum=-3.884;QD=30.03;ReadPosRankSum=3.703;VQSLOD=4.7173;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,138,1912	0/0:6,0:6:18.06:0,18,252	0/0:16,0:16:47.69:0,48,617	0/0:17,0:17:51.15:0,51,684	0/0:20,0:20:60.17:0,60,805	0/0:34,0:33:99:0,99,1369	0/0:21,0:21:63.16:0,63,825	0/0:31,0:31:93.30:0,93,1286	0/0:26,0:26:78.25:0,78,1073	1/1:1,28:29:84.19:938,84,0	1/1:0,17:19:54.12:588,54,0	1/1:2,30:32:89.95:927,90,0	1/1:2,29:33:98.90:1041,99,0	1/1:3,24:27:78.15:842,78,0	0/0:31,0:31:90.30:0,90,1259	1/1:3,20:23:65.94:658,66,0	1/1:1,18:19:54.12:585,54,0	1/1:0,17:17:51.01:532,51,0	1/1:0,18:21:63.11:647,63,0	1/1:1,29:30:87.05:921,87,0	1/1:0,15:15:38.39:369,38,0	1/1:0,22:22:63.02:647,63,0	1/1:0,17:17:48.10:506,48,0	1/1:2,15:17:44.83:469,45,0	0/0:27,0:27:78.71:0,79,1060	0/0:26,0:26:78.25:0,78,1076	0/0:33,0:33:96.32:0,96,1340	0/0:11,0:11:33.08:0,33,441
chr10	19776005	.	A	AGT	13941.59	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=20.516;DP=705;FS=1.964;HRun=0;HaplotypeScore=150.0728;InbreedingCoeff=0.9988;MQ=74.67;MQ0=0;MQRankSum=-8.143;QD=39.27;ReadPosRankSum=2.418;VQSLOD=6.2204;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,126,2190	0/0:6,0:6:18.06:0,18,289	0/0:17,0:17:47.88:0,48,716	0/0:18,0:18:50.87:0,51,738	0/0:19,0:19:57.19:0,57,917	0/0:34,0:33:99:0,99,1613	0/0:21,0:21:60.20:0,60,974	0/0:32,0:32:93.31:0,93,1479	0/0:27,0:27:78.25:0,78,1239	1/1:3,27:30:90.29:1357,90,0	1/1:3,17:20:54.14:794,54,0	1/1:3,29:33:98.11:1390,98,0	1/1:5,29:35:99:1490,104,0	1/1:4,24:28:78.26:1183,78,0	0/0:32,0:32:90.31:0,90,1464	1/1:8,20:28:79.77:1040,80,0	1/1:6,18:24:66.19:961,66,0	1/1:1,17:18:50.38:731,50,0	1/1:7,18:24:60.16:887,60,0	1/1:8,29:37:89.10:1297,89,0	1/1:1,15:16:37.35:472,37,0	1/1:4,22:26:71.23:997,71,0	1/1:1,17:18:48.16:712,48,0	1/1:2,15:17:42.14:631,42,0	0/0:26,0:26:71.80:0,72,1147	0/0:26,0:26:78.26:0,78,1249	0/0:35,0:35:99:0,99,1537	0/0:11,0:11:33.11:0,33,531
chr10	19776265	.	G	GACA	18595.15	PASS	AB=0.559;AC=27;AF=0.482;AN=56;BaseQRankSum=-17.109;DP=939;FS=0.572;HRun=0;HaplotypeScore=121.9963;InbreedingCoeff=0.9333;MQ=65.43;MQ0=0;MQRankSum=1.023;QD=36.82;ReadPosRankSum=5.125;VQSLOD=5.3615;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,123,1769	0/0:14,0:14:33.11:0,33,489	0/0:17,0:16:29.64:0,30,393	0/0:22,0:22:48.72:0,49,558	0/0:28,0:28:63.09:0,63,815	0/0:28,0:28:69.22:0,69,1003	0/0:34,0:34:87.13:0,87,1075	0/0:29,0:29:63.05:0,63,754	0/0:43,0:43:99:0,105,1460	1/1:4,30:41:99:1664,105,0	1/1:8,25:34:60.16:1160,60,0	1/1:4,25:29:59.96:1249,60,0	1/1:9,35:45:48.46:1622,48,0	1/1:6,40:48:93.32:1922,93,0	0/0:47,0:46:99:0,117,1592	0/1:11,41:52:8.60:1716,0,9	1/1:2,23:27:48.16:1000,48,0	1/1:6,17:23:30.10:625,30,0	1/1:5,14:21:48.12:799,48,0	1/1:5,17:24:42.14:860,42,0	1/1:9,52:62:93.32:1937,93,0	1/1:6,27:33:60.21:1227,60,0	1/1:3,21:24:43.09:878,43,0	1/1:5,36:42:93.32:1937,93,0	0/0:38,0:38:99:0,102,1330	0/0:31,1:32:12.61:0,13,876	0/0:29,0:29:84.18:0,84,1216	0/0:21,0:21:63.17:0,63,905
chr10	19781821	.	CT	C	13543.70	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=16.186;DP=745;FS=1.859;HRun=2;HaplotypeScore=71.7393;InbreedingCoeff=0.9989;MQ=78.81;MQ0=0;MQRankSum=0.654;QD=35.83;ReadPosRankSum=4.304;VQSLOD=5.4116;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,132,1954	0/0:12,0:12:36.12:0,36,538	0/0:17,0:17:45.13:0,45,612	0/0:17,0:18:45.13:0,45,655	0/0:41,0:41:99:0,123,1820	0/0:26,0:26:78.26:0,78,1168	0/0:26,0:26:78.26:0,78,1168	0/0:33,0:33:96.31:0,96,1404	0/0:23,0:23:69.21:0,69,996	1/1:0,37:37:99:1426,111,0	1/1:0,28:28:78.25:1013,78,0	1/1:0,27:27:78.25:1012,78,0	1/1:1,29:30:78.25:1012,78,0	1/1:0,37:37:99:1285,99,0	0/0:28,0:28:84.27:0,84,1239	1/1:2,30:32:78.25:1013,78,0	1/1:0,30:30:81.26:1052,81,0	1/1:0,25:25:69.22:896,69,0	1/1:1,26:27:78.24:997,78,0	1/1:0,21:21:60.16:761,60,0	1/1:0,20:20:54.18:701,54,0	1/1:0,25:25:75.24:973,75,0	1/1:2,20:22:63.20:818,63,0	1/1:1,16:17:45.15:584,45,0	0/0:30,0:30:90.30:0,90,1349	0/0:30,0:30:87.29:0,87,1303	0/0:32,0:31:93.23:0,93,1363	0/0:6,0:6:18.06:0,18,270
chr10	19782266	.	A	AACAC	2282.53	PASS	AB=0.915;AC=26;AF=0.464;AN=56;BaseQRankSum=9.603;DP=687;FS=22.482;HRun=0;HaplotypeScore=160.0901;InbreedingCoeff=0.7776;MQ=57.01;MQ0=17;MQRankSum=-0.076;QD=7.53;ReadPosRankSum=0.175;VQSLOD=1.5239;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:48.98:0,49,940	0/0:15,0:15:32.58:0,33,464	0/0:41,0:7:5.77:0,6,82	0/0:63,0:29:4.75:0,5,60	0/0:21,0:21:36.11:0,36,551	0/0:21,0:20:42.03:0,42,625	0/0:18,0:19:24.06:0,24,343	0/0:31,0:31:34.03:0,34,634	0/0:22,0:21:42.07:0,42,663	1/1:16,1:16:17.88:148,18,0	1/1:16,1:17:8.45:50,8,0	0/1:18,2:20:18.51:184,0,19	1/1:18,1:20:21:147,21,0	0/1:21,1:23:16.17:34,0,16	0/0:32,0:31:53.56:0,54,832	1/1:18,3:22:30.52:467,31,0	1/1:13,1:14:17.97:202,18,0	1/1:13,3:17:22.51:309,23,0	1/1:21,1:21:15.50:183,16,0	1/1:21,1:24:16.67:143,17,0	1/1:46,0:45:23.55:246,24,0	1/1:18,0:18:21.04:219,21,0	1/1:6,0:6:2.39:15,2,0	1/1:31,1:33:19.36:149,19,0	0/0:21,0:21:54.10:0,54,716	0/0:32,0:32:72.10:0,72,1045	0/0:21,0:20:42.11:0,42,625	0/0:12,0:12:11.40:0,11,408
chr10	19782286	.	CAT	C	1906.58	PASS	AB=0.957;AC=28;AF=0.500;AN=56;BaseQRankSum=7.567;DP=665;FS=18.740;HRun=0;HaplotypeScore=141.7895;InbreedingCoeff=0.7784;MQ=51.05;MQ0=32;MQRankSum=-0.621;QD=5.57;ReadPosRankSum=-2.540;VQSLOD=1.7827;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:61.12:0,61,1128	0/0:12,0:12:1:0,1,323	0/0:27,0:4:5.82:0,6,44	0/1:36,0:9:2.30:2,0,12	0/0:18,0:18:39.05:0,39,520	0/0:20,0:20:51.10:0,51,835	0/0:19,0:19:27.75:0,28,510	0/0:38,0:33:51.01:0,51,820	0/0:25,0:23:41.36:0,41,795	1/1:19,0:17:31.38:231,31,0	1/1:19,0:16:11.64:120,12,0	1/1:25,0:24:5.85:125,6,0	0/1:15,1:16:4.57:81,0,5	1/1:21,0:20:12.14:85,12,0	0/0:30,0:29:46.89:0,47,942	1/1:24,0:24:19.69:174,20,0	1/1:17,0:15:12.80:95,13,0	1/1:14,1:14:30.32:236,30,0	1/1:21,0:18:26.91:230,27,0	1/1:20,1:21:4.54:140,5,0	1/1:47,0:43:23.18:193,23,0	1/1:23,0:23:29.34:240,29,0	1/1:8,0:8:2.80:16,3,0	1/1:26,3:28:19.81:146,20,0	0/0:27,0:27:49.03:0,49,792	0/0:37,0:34:69.42:0,69,1231	0/0:20,0:19:50.67:0,51,760	0/0:16,0:16:9.84:0,10,489
chr10	19782318	.	CAT	C	1004.36	PASS	AB=0.994;AC=26;AF=0.464;AN=56;BaseQRankSum=12.289;DP=641;FS=3.410;HRun=0;HaplotypeScore=152.1461;InbreedingCoeff=0.4050;MQ=41.95;MQ0=42;MQRankSum=-7.670;QD=3.03;ReadPosRankSum=-1.387;VQSLOD=2.1169;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:40:73.80:0,74,1400	0/0:7,0:7:19.83:0,20,251	0/0:29,0:5:5.03:0,5,162	0/0:36,0:1:3.01:0,3,34	0/0:16,0:15:0.18:0,0,401	0/0:21,0:21:26.13:0,26,865	0/0:26,0:26:39.76:0,40,685	0/0:35,0:26:48.44:0,48,809	0/1:26,1:26:0.75:1,0,723	1/1:17,0:15:10.30:168,10,0	1/1:14,1:12:1.87:10,2,0	1/1:26,0:26:25.91:207,26,0	1/1:18,0:18:2.21:112,2,0	1/1:19,2:20:13.19:87,13,0	0/0:30,1:31:34.39:0,34,728	1/1:24,0:24:18.73:102,19,0	0/1:16,0:15:10.96:115,0,11	1/1:8,0:7:2.05:33,2,0	0/1:23,0:21:27.48:184,0,27	0/1:20,0:20:1.95:2,0,21	0/1:41,0:35:32.97:37,0,33	1/1:19,1:20:5.87:48,6,0	1/1:15,1:16:2.14:15,2,0	1/1:22,0:22:10.85:53,11,0	0/0:17,0:17:38.96:0,39,675	0/0:29,0:26:4.82:0,5,1033	0/0:22,0:21:26.67:0,27,677	0/1:17,0:16:7.77:8,0,442
chr10	19782320	.	TAC	T	1350.55	PASS	AB=0.784;AC=20;AF=0.357;AN=56;BaseQRankSum=8.711;DP=631;FS=4.535;HRun=0;HaplotypeScore=149.4459;InbreedingCoeff=0.5954;MQ=41.99;MQ0=44;MQRankSum=-9.638;QD=6.06;ReadPosRankSum=-0.650;VQSLOD=3.0735;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:88.83:0,89,1357	0/0:6,0:6:11.99:0,12,171	0/0:30,0:5:12.14:0,12,149	0/0:37,0:1:3:0,3,29	0/0:16,0:15:35.81:0,36,519	0/0:21,0:21:55.55:0,56,803	0/0:22,2:24:24.25:0,24,629	0/0:35,0:25:31.34:0,31,770	0/0:26,0:25:44.71:0,45,663	1/1:9,7:14:25.03:308,25,0	1/1:8,7:12:1.09:5,1,0	1/1:16,9:25:20.40:214,20,0	0/1:11,7:18:31.02:143,0,31	0/1:12,9:20:3.49:126,0,3	0/0:30,1:31:42.50:0,42,635	1/1:13,8:21:20.38:175,20,0	1/1:7,9:15:20.20:223,20,0	1/1:6,3:8:2.34:71,2,0	0/1:21,3:22:0.04:153,0,0	1/1:11,8:19:2.92:27,3,0	0/0:31,9:34:3.79:0,4,26	0/1:15,4:19:0.20:0,0,0	0/0:11,6:17:1.20:0,1,4	1/1:16,4:20:0.20:78,0,0	0/0:16,0:16:39.02:0,39,637	0/0:28,0:25:52.79:0,53,937	0/0:22,0:21:43.58:0,44,637	0/0:17,0:16:35.03:0,35,502
chr10	19782329	.	ACACG	A	405.88	PASS	AB=0.985;AC=15;AF=0.268;AN=56;BaseQRankSum=9.337;DP=616;FS=6.825;HRun=0;HaplotypeScore=159.6868;InbreedingCoeff=0.0605;MQ=42.13;MQ0=40;MQRankSum=-3.661;QD=1.62;ReadPosRankSum=-3.997;VQSLOD=0.8503;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:42:78.14:0,78,1813	0/0:5,0:5:12.04:0,12,251	0/0:30,0:5:7.16:0,7,200	0/0:37,0:1:3.01:0,3,56	0/0:17,0:16:11.16:0,11,692	0/0:22,0:22:15.31:0,15,931	0/0:26,0:26:43.61:0,44,942	0/0:31,0:24:40.68:0,41,1081	0/0:24,0:24:15.09:0,15,897	0/1:16,0:14:46.71:88,0,47	1/1:16,0:13:0.43:20,0,0	0/1:22,1:23:18.67:77,0,19	0/1:17,0:16:17.96:18,0,56	0/1:21,1:21:1.96:52,0,2	0/0:28,0:27:43.08:0,43,775	0/1:20,2:22:6.27:57,0,6	0/1:13,0:13:17.80:18,0,45	0/1:8,0:7:5.16:26,0,5	0/1:22,0:20:99:130,0,106	0/1:14,0:14:12.57:13,0,20	1/1:41,0:32:5.93:49,6,0	0/1:18,0:18:0.08:0,0,0	0/0:20,0:20:0.53:0,1,3	0/1:19,0:19:3.79:4,0,26	0/0:17,0:18:42.10:0,42,881	0/0:27,0:26:26.40:0,26,1245	0/0:22,0:22:36.53:0,37,903	0/0:15,0:14:36.56:0,37,614
chr10	19782331	.	ACG	A	1556.34	PASS	AB=0.630;AC=27;AF=0.482;AN=56;BaseQRankSum=12.214;DP=601;FS=16.688;HRun=0;HaplotypeScore=140.5831;InbreedingCoeff=0.7981;MQ=42.57;MQ0=39;MQRankSum=-7.492;QD=6.01;ReadPosRankSum=-3.936;VQSLOD=1.2266;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:41,1:41:76.18:0,76,1429	0/0:5,0:5:6.71:0,7,165	0/0:30,0:5:5.46:0,5,131	0/0:37,0:1:3.01:0,3,42	0/0:17,0:16:15.08:0,15,545	0/0:22,0:22:22.67:0,23,757	0/0:26,0:26:24.46:0,24,726	0/0:28,0:21:40.42:0,40,823	0/0:25,0:25:16.53:0,17,720	1/1:13,1:13:38.33:321,38,0	1/1:16,0:13:6.41:43,6,0	1/1:17,5:22:26.77:228,27,0	1/1:14,2:15:2.91:125,3,0	1/1:17,3:19:17:151,17,0	0/0:27,0:26:42.02:0,42,626	1/1:11,11:22:20.67:217,21,0	1/1:12,0:12:20.78:148,21,0	1/1:4,3:6:8.37:65,8,0	1/1:19,0:17:3.05:222,3,0	1/1:8,6:14:5.89:27,6,0	1/1:39,1:31:9.77:73,10,0	0/1:7,10:17:0.03:0,0,0	1/1:17,3:20:2.94:21,3,0	1/1:19,1:20:16.90:117,17,0	0/0:18,0:18:41.60:0,42,683	0/0:26,0:25:28.95:0,29,902	0/0:24,0:24:42.22:0,42,747	0/0:15,0:14:26.19:0,26,434
chr10	19782338	.	AACACACACACACAC	A	1578.88	PASS	AB=0.950;AC=21;AF=0.404;AN=52;BaseQRankSum=6.144;DP=630;FS=9.394;HRun=0;HaplotypeScore=226.9611;InbreedingCoeff=0.5186;MQ=41.99;MQ0=35;MQRankSum=-6.771;QD=6.55;ReadPosRankSum=-7.483;VQSLOD=-0.5970;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:60.18:0,60,2237	0/0:7,0:7:9.03:0,9,256	./.	./.	0/0:15,0:16:33.09:0,33,1084	0/0:21,0:21:39.13:0,39,1122	0/0:27,0:28:39.96:0,40,1254	0/0:32,0:28:41.99:0,42,519	0/0:25,0:27:49.36:0,49,1553	0/1:15,0:14:43.59:152,0,44	0/1:15,0:12:14.84:15,0,16	1/1:25,0:25:22.77:264,23,0	0/1:17,0:16:28.50:43,0,28	1/1:24,0:23:15.19:235,15,0	0/0:23,0:26:30.09:0,30,796	1/1:21,0:21:16.74:258,17,0	0/1:16,0:16:56.40:57,0,56	1/1:6,0:5:3.01:36,3,0	0/1:16,8:21:46.01:264,0,46	1/1:16,0:16:14.84:132,15,0	0/0:40,0:36:2.67:0,3,23	1/1:19,0:18:13.58:96,14,0	1/1:14,6:20:11.22:79,11,0	1/1:23,0:23:11.03:136,11,0	0/0:19,0:19:32.64:0,33,1170	0/0:20,0:24:48.16:0,48,1729	0/0:22,0:25:54.63:0,55,1456	0/0:15,0:14:27.09:0,27,1057
chr10	19782347	.	A	ACG	659.87	PASS	AB=0.989;AC=14;AF=0.250;AN=56;BaseQRankSum=6.307;DP=618;FS=11.270;HRun=0;HaplotypeScore=144.8185;InbreedingCoeff=0.1369;MQ=44.15;MQ0=27;MQRankSum=2.266;QD=3.23;ReadPosRankSum=-1.999;VQSLOD=1.7391;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:35:82.57:0,83,887	0/0:6,0:6:11.85:0,12,113	0/0:20,0:6:11.77:0,12,78	0/0:31,0:4:5.99:0,6,48	0/0:18,0:18:22.05:0,22,397	0/0:24,0:23:40.07:0,40,550	0/0:25,0:25:49.64:0,50,544	0/0:32,0:31:77.67:0,78,602	0/0:27,0:28:58.26:0,58,620	0/1:14,0:14:54.36:54,0,121	0/0:12,0:10:2.91:0,3,12	0/1:23,1:24:26.50:76,0,26	0/1:17,0:16:6.13:6,0,64	0/1:21,0:20:47.24:67,0,47	0/0:29,0:28:56.92:0,57,549	0/1:18,1:19:8.74:117,0,9	0/1:17,0:17:59.23:59,0,64	0/1:7,0:5:10.12:28,0,10	0/1:22,0:20:99:102,0,226	1/1:16,0:16:6.20:71,6,0	0/0:29,11:38:8.54:0,9,61	1/1:20,0:19:8.86:63,9,0	0/0:18,1:19:2.90:0,3,19	1/1:26,1:27:3.58:172,4,0	0/0:22,0:22:47.99:0,48,480	0/0:26,0:26:54.76:0,55,662	0/0:27,0:27:77.82:0,78,789	0/0:14,0:13:32.93:0,33,338
chr10	19782986	.	AGT	A	846.80	PASS	AB=0.969;AC=16;AF=0.296;AN=54;BaseQRankSum=9.762;DP=393;FS=23.782;HRun=0;HaplotypeScore=65.6962;InbreedingCoeff=-0.2987;MQ=81.53;MQ0=0;MQRankSum=-2.851;QD=3.47;ReadPosRankSum=9.098;VQSLOD=-0.3091;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:14.93:0,15,114	./.	0/0:18,0:17:11.47:0,11,316	0/1:16,0:15:25.01:25,0,80	0/0:10,0:11:12.43:0,12,95	0/0:8,0:8:11.57:0,12,103	0/0:14,1:15:2.24:0,2,303	0/0:13,0:13:23.73:0,24,184	0/0:7,0:7:9:0,9,100	0/1:19,0:19:10.55:11,0,111	1/1:17,0:17:5.58:88,6,0	0/1:17,0:17:23.96:24,0,91	0/1:16,3:19:38.61:158,0,39	0/1:11,0:11:26.26:26,0,95	0/0:15,0:15:33.02:0,33,372	0/1:15,0:15:31.15:31,0,50	0/1:14,1:15:32.57:83,0,33	0/1:12,0:12:35.14:35,0,52	0/1:15,1:16:72.49:78,0,72	0/1:23,3:26:13.52:243,0,14	0/1:18,0:18:8.55:9,0,67	0/1:13,0:13:56.93:57,0,67	0/1:12,1:13:27.52:76,0,28	0/1:17,0:17:55.99:56,0,60	0/0:11,0:11:17.26:0,17,159	0/0:9,0:9:6:0,6,53	0/0:19,0:19:24:0,24,260	0/0:8,0:8:15:0,15,168
chr10	19782988	.	TGG	T	3730.31	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=2.461;DP=388;FS=8.181;HRun=12;HaplotypeScore=57.1138;InbreedingCoeff=0.8417;MQ=81.31;MQ0=0;MQRankSum=-1.688;QD=16.22;ReadPosRankSum=8.581;VQSLOD=1.0555;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:8:11.97:0,12,96	0/0:4,0:4:3:0,3,26	0/0:18,0:17:23.46:0,23,227	0/1:17,0:15:24:24,0,127	0/0:7,0:7:11.90:0,12,93	0/0:11,0:11:18.61:0,19,201	0/0:15,0:20:10.26:0,10,292	0/0:13,0:18:11:0,11,39	0/0:10,0:10:23.88:0,24,205	1/1:7,13:20:23.92:237,24,0	1/1:2,13:15:30.06:305,30,0	1/1:5,11:16:24.03:244,24,0	1/1:7,9:16:33.03:322,33,0	1/1:7,4:11:11.20:121,11,0	0/0:15,0:15:27.04:0,27,308	1/1:3,9:12:21.04:214,21,0	1/1:4,11:16:13.78:322,14,0	1/1:6,6:12:15.02:151,15,0	1/1:6,8:15:23.99:242,24,0	1/1:7,20:27:57.07:576,57,0	1/1:2,7:13:16.98:179,17,0	1/1:3,9:12:24.05:244,24,0	1/1:3,8:12:23.54:216,24,0	1/1:4,12:16:33.05:335,33,0	0/0:12,0:12:11.41:0,11,134	0/0:5,1:6:6:0,6,53	0/0:13,0:23:26.99:0,27,281	0/0:5,0:6:9.01:0,9,93
chr10	19794624	.	T	TCAG	10202.05	PASS	AB=0.774;AC=23;AF=0.411;AN=56;BaseQRankSum=-5.467;DP=814;FS=8.736;HRun=0;HaplotypeScore=161.0477;InbreedingCoeff=0.6213;MQ=58.25;MQ0=0;MQRankSum=-4.327;QD=24.88;ReadPosRankSum=4.225;VQSLOD=4.6346;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:69.13:0,69,934	0/0:19,0:19:36.04:0,36,486	0/0:19,0:20:36.09:0,36,430	0/0:26,0:25:24.59:0,25,421	0/0:14,0:12:15:0,15,174	0/0:20,0:20:33:0,33,422	0/0:44,0:44:99:0,105,1451	0/0:30,0:30:39.09:0,39,476	0/0:41,0:41:84.20:0,84,1122	1/1:30,9:36:45.14:821,45,0	1/1:14,0:14:5.75:89,6,0	1/1:18,14:31:48.10:900,48,0	1/1:21,17:38:72.18:1383,72,0	1/1:23,20:43:78.16:1466,78,0	0/0:48,0:48:96.31:0,96,1346	0/1:18,21:39:23.10:1377,0,23	0/1:17,11:28:23.96:618,0,24	1/1:10,10:20:44.19:890,44,0	0/1:14,4:16:37.05:262,0,37	1/1:17,5:21:24.04:392,24,0	0/1:16,9:22:4.84:391,0,5	1/1:14,4:18:12.04:243,12,0	0/1:18,1:19:16.90:57,0,17	1/1:32,23:52:48.65:1313,49,0	0/0:38,0:38:54.05:0,54,659	0/0:33,0:33:66.20:0,66,893	0/0:23,0:23:48.16:0,48,683	0/0:5,0:5:9.03:0,9,128
chr10	19794674	.	A	ACAACAG	7843.86	PASS	AB=0.900;AC=23;AF=0.411;AN=56;BaseQRankSum=11.337;DP=713;FS=1.844;HRun=0;HaplotypeScore=177.4073;InbreedingCoeff=0.6037;MQ=47.26;MQ0=11;MQRankSum=-10.842;QD=27.43;ReadPosRankSum=-2.973;VQSLOD=4.3036;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:38:65.34:0,65,1134	0/0:11,0:11:18.06:0,18,397	0/0:44,0:27:8.06:0,8,716	0/0:45,0:23:55.39:0,55,848	0/0:19,0:19:36.03:0,36,705	0/0:20,0:19:33.06:0,33,623	0/0:43,0:43:82.66:0,83,1935	0/0:38,0:36:75.23:0,75,1390	0/0:40,0:40:90.30:0,90,1909	1/1:15,2:13:20.93:383,21,0	1/1:2,6:9:3.01:96,3,0	1/1:18,8:25:44.73:1296,45,0	1/1:26,6:32:69.15:1495,69,0	1/1:20,3:23:39.05:912,39,0	0/0:54,0:53:99:0,135,2809	0/1:21,7:27:99:1152,0,100	0/1:18,1:18:43.13:308,0,43	0/1:22,2:20:19.79:455,0,20	1/1:5,1:5:9:177,9,0	1/1:10,1:8:14.53:232,15,0	0/1:21,3:17:0.36:286,0,0	1/1:10,4:13:24.03:438,24,0	1/1:5,1:5:5.93:75,6,0	0/1:43,3:41:24.08:540,0,24	0/0:15,0:14:27.07:0,27,508	0/0:33,0:33:87.26:0,87,1731	0/0:20,0:20:48.16:0,48,1022	0/0:6,0:6:18.04:0,18,337
chr10	19794683	.	A	ACAG	3868.82	PASS	AB=0.940;AC=16;AF=0.286;AN=56;BaseQRankSum=10.041;DP=729;FS=8.741;HRun=0;HaplotypeScore=161.0646;InbreedingCoeff=-0.2077;MQ=45.16;MQ0=20;MQRankSum=-8.895;QD=11.87;ReadPosRankSum=3.473;VQSLOD=2.5083;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:38:80.96:0,81,1122	0/0:8,0:8:21.06:0,21,334	0/0:37,0:19:23.19:0,23,631	0/0:42,0:21:58.58:0,59,773	0/0:19,0:19:39.57:0,40,633	0/0:18,0:17:36.05:0,36,528	0/0:43,0:43:99:0,123,1911	0/0:35,0:34:96.30:0,96,1554	0/0:39,0:39:99:0,99,1570	0/1:17,1:12:39.01:220,0,39	0/1:9,0:9:44.63:61,0,45	0/1:27,3:28:99:662,0,105	0/1:31,6:37:99:615,0,395	0/1:20,4:24:99:495,0,181	0/0:56,0:55:99:0,153,2492	0/1:29,2:30:99:554,0,300	0/1:23,3:25:99:194,0,433	0/1:21,1:18:99:210,0,122	0/1:5,0:4:4.24:127,0,4	0/1:10,0:8:71.55:117,0,72	0/1:27,2:19:99:131,0,207	0/1:13,2:13:53.36:173,0,53	1/1:4,1:4:5.93:75,6,0	0/1:50,1:47:99:229,0,548	0/0:14,0:12:30.07:0,30,457	0/0:33,0:32:93.30:0,93,1514	0/0:19,0:19:51.17:0,51,817	0/1:8,0:8:5.98:6,0,286
chr10	19794689	.	GCAGCAGCAA	G	2105.55	PASS	AB=0.984;AC=15;AF=0.268;AN=56;BaseQRankSum=10.817;DP=741;FS=29.842;HRun=0;HaplotypeScore=238.4050;InbreedingCoeff=-0.2162;MQ=45.14;MQ0=21;MQRankSum=-10.422;QD=6.03;ReadPosRankSum=3.104;VQSLOD=0.8347;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:36:68.46:0,68,1461	0/0:7,0:7:21.07:0,21,701	0/0:29,0:15:20.60:0,21,434	0/0:36,0:18:39.89:0,40,592	0/0:21,0:21:38.66:0,39,1354	0/0:15,0:14:33.11:0,33,1038	0/0:42,0:42:99:0,116,3978	0/0:37,0:34:91.51:0,92,1900	0/0:36,0:36:99:0,99,3637	0/1:18,0:13:88.83:89,0,133	0/1:10,0:10:17.62:43,0,18	0/1:28,4:29:99:407,0,122	0/1:47,0:46:99:361,0,446	0/1:22,2:23:99:357,0,125	0/0:59,0:58:99:0,169,6280	0/1:39,1:39:99:358,0,632	0/1:29,0:28:13.01:13,0,330	0/1:22,0:17:99:110,0,117	0/1:6,0:4:10.43:51,0,10	0/1:12,0:9:57.89:58,0,70	0/1:35,0:23:99:189,0,124	0/1:15,0:13:95.33:95,0,111	1/1:6,0:5:3.01:31,3,0	0/1:53,0:50:99:101,0,513	0/0:14,0:12:27.03:0,27,909	0/0:30,0:29:84.27:0,84,2751	0/0:19,0:19:55.94:0,56,1835	0/0:8,0:8:24.08:0,24,749
chr10	19794725	.	GCAGCAACAA	G	771.60	PASS	AB=1.000;AC=7;AF=0.135;AN=52;BaseQRankSum=7.376;DP=960;FS=7.663;HRun=0;HaplotypeScore=336.0003;InbreedingCoeff=0.0263;MQ=44.37;MQ0=59;MQRankSum=-7.027;QD=2.66;ReadPosRankSum=-5.670;VQSLOD=0.4600;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:30:47.69:0,48,1142	0/0:5,0:5:15.03:0,15,360	./.	./.	0/0:28,0:27:45.53:0,46,1215	0/0:13,0:11:27.07:0,27,668	0/0:46,0:46:99:0,108,2708	1/1:22,17:28:2:494,2,0	0/0:44,0:44:99:0,99,3652	0/0:38,0:23:1.61:0,2,664	0/0:13,0:12:5.98:0,6,65	0/0:48,0:44:95.86:0,96,2078	0/0:66,0:61:90.66:0,91,2697	0/0:51,0:47:94.98:0,95,1788	0/0:62,0:61:99:0,120,4131	0/0:47,0:46:99:0,114,2833	0/1:41,0:39:2.87:3,0,1673	0/1:37,0:31:41.07:41,0,1120	0/1:17,0:13:9.08:9,0,433	0/0:23,0:16:29.95:0,30,777	0/1:79,0:54:99:226,0,1299	0/0:30,0:25:29.32:0,29,343	0/0:15,0:10:8.89:0,9,200	0/1:76,0:70:99:114,0,2560	0/0:21,0:19:38.95:0,39,799	0/0:33,0:27:54.11:0,54,1509	0/0:27,0:27:66.13:0,66,2035	0/0:8,0:7:0:0,0,295
chr10	19794788	.	G	GCAA	19852.85	PASS	AB=0.624;AC=25;AF=0.446;AN=56;BaseQRankSum=16.123;DP=1188;FS=13.640;HRun=0;HaplotypeScore=231.0509;InbreedingCoeff=0.7429;MQ=46.10;MQ0=30;MQRankSum=-7.604;QD=30.36;ReadPosRankSum=3.636;VQSLOD=3.9356;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:77.98:0,78,1159	0/0:10,0:10:24.07:0,24,329	0/0:63,0:26:28.69:0,29,623	0/0:64,0:23:37.63:0,38,442	0/0:14,0:13:30.10:0,30,421	0/0:18,0:18:39.13:0,39,591	0/0:55,0:55:99:0,127,2058	0/0:35,0:31:77.98:0,78,1011	0/0:64,0:64:99:0,172,2556	1/1:13,27:32:13.08:1151,13,0	1/1:6,1:6:9.03:150,9,0	1/1:24,38:60:99:2563,138,0	1/1:35,30:61:99:2215,120,0	1/1:25,30:55:99:2223,123,0	0/0:59,0:59:99:0,150,2091	1/1:27,37:62:59.58:2505,60,0	1/1:23,24:45:32.47:1644,32,0	1/1:22,21:41:6.39:1530,6,0	0/1:17,9:21:15.59:365,0,16	0/1:5,22:27:39.82:630,0,40	1/1:68,21:73:68.29:1655,68,0	1/1:17,10:22:7.80:619,8,0	0/1:6,11:17:57.40:117,0,57	1/1:38,40:75:44.03:2488,44,0	0/0:23,0:21:54.13:0,54,732	0/0:39,1:35:16.77:0,17,1042	0/0:39,0:39:90.23:0,90,1325	0/0:5,0:4:12.04:0,12,185
chr10	19794872	.	ACAG	A	4100.09	PASS	AB=0.825;AC=17;AF=0.327;AN=52;BaseQRankSum=11.647;DP=722;FS=18.232;HRun=0;HaplotypeScore=135.2210;InbreedingCoeff=0.3274;MQ=51.05;MQ0=23;MQRankSum=-9.958;QD=16.80;ReadPosRankSum=-5.064;VQSLOD=0.7087;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:35:88.54:0,89,1771	0/0:12,0:12:35.93:0,36,538	0/0:34,0:15:12.13:0,12,637	0/0:40,1:17:31.73:0,32,684	0/0:12,0:11:21.07:0,21,409	0/0:20,0:19:48.16:0,48,1037	0/0:49,1:50:98.38:0,98,2911	0/0:36,0:31:90.30:0,90,1730	0/0:56,0:56:99:0,165,3351	1/1:16,1:8:20.96:200,21,0	./.	0/1:22,15:35:69.46:966,0,69	0/1:14,9:19:4.72:460,0,5	0/1:15,7:21:31.60:495,0,32	0/0:94,0:94:99:0,277,5836	1/1:17,15:31:2.83:895,3,0	0/1:11,1:12:48.98:49,0,118	0/1:16,2:18:99:223,0,127	1/1:1,6:6:17.63:215,18,0	1/1:5,0:4:3.48:49,3,0	0/1:29,4:28:99:237,0,140	1/1:8,3:7:11.91:110,12,0	./.	0/1:23,4:27:35.62:200,0,36	0/0:22,0:20:51.16:0,51,1031	0/0:29,0:29:86.34:0,86,1501	0/0:26,0:26:78.09:0,78,1491	0/0:5,0:5:11.87:0,12,182
chr10	19794875	.	G	GTAGCAA	5589.02	PASS	AB=0.978;AC=13;AF=0.250;AN=52;BaseQRankSum=8.439;DP=726;FS=20.702;HRun=0;HaplotypeScore=186.3725;InbreedingCoeff=-0.0862;MQ=51.13;MQ0=17;MQRankSum=-8.654;QD=22.45;ReadPosRankSum=-3.861;VQSLOD=2.6445;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:88.54:0,89,2031	0/0:13,0:13:35.98:0,36,635	0/0:35,0:16:12.32:0,12,720	0/0:38,0:18:35.51:0,36,761	0/0:12,0:11:21.07:0,21,470	0/0:19,0:18:48.16:0,48,1156	0/0:52,0:52:99:0,122,3400	0/0:35,0:32:93.31:0,93,2086	0/0:57,0:57:99:0,169,3910	0/1:17,0:9:6.76:150,0,7	./.	0/1:39,1:38:99:1404,0,230	0/1:22,0:18:82.98:564,0,83	0/1:22,0:21:99:623,0,117	0/0:94,0:94:99:0,283,6676	0/1:31,1:31:99:1175,0,148	0/1:12,0:12:64.91:65,0,249	0/1:17,1:18:99:412,0,286	0/1:8,1:6:4.93:318,0,5	0/1:4,0:3:36.59:56,0,37	0/1:36,0:31:99:325,0,351	1/1:12,0:9:8.94:107,9,0	./.	0/1:24,1:25:99:390,0,144	0/0:20,0:19:48.16:0,48,1131	0/0:33,0:33:92.40:0,92,1806	0/0:25,0:25:75.23:0,75,1666	0/0:4,0:4:12.01:0,12,224
chr10	19795106	.	ACAGCAACAACAG	A	11387.22	PASS	AB=0.719;AC=22;AF=0.393;AN=56;BaseQRankSum=10.550;DP=911;FS=16.755;HRun=0;HaplotypeScore=292.1698;InbreedingCoeff=0.4771;MQ=45.31;MQ0=37;MQRankSum=-11.831;QD=28.98;ReadPosRankSum=-0.735;VQSLOD=2.6300;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:41:81.28:0,81,3747	0/0:19,0:18:42.14:0,42,1833	0/0:44,0:12:21.07:0,21,664	0/0:65,0:29:63.10:0,63,1618	0/0:19,0:15:39.02:0,39,1435	0/0:15,0:15:21.07:0,21,1059	0/0:60,0:60:99:0,166,7493	0/0:33,0:33:75.25:0,75,2844	0/0:56,0:56:99:0,138,6529	1/1:28,2:23:18.93:351,19,0	1/1:11,0:6:2.99:23,3,0	0/1:20,15:39:48.34:1669,0,48	1/1:18,8:25:32.11:1371,32,0	0/1:23,14:37:20.26:1643,0,20	0/0:67,0:67:99:0,157,7730	0/1:13,22:37:99:2377,0,254	1/1:25,2:28:14.38:422,14,0	0/1:14,5:20:33.75:781,0,34	0/1:9,5:8:22.81:266,0,23	1/1:6,15:17:20.87:271,21,0	1/1:47,6:49:20.37:1217,20,0	1/1:7,14:16:2.92:17,3,0	1/1:9,1:4:5.99:87,6,0	0/1:34,6:42:10.66:893,0,11	0/0:21,0:20:38.21:0,38,1240	0/0:37,0:34:87.25:0,87,3343	0/0:26,0:25:78.21:0,78,3257	0/0:9,0:9:15.05:0,15,737
chr10	19795109	.	GCAA	G	1701.76	PASS	AB=0.983;AC=14;AF=0.250;AN=56;BaseQRankSum=16.213;DP=881;FS=0.372;HRun=0;HaplotypeScore=194.1317;InbreedingCoeff=0.2037;MQ=46.02;MQ0=36;MQRankSum=-11.915;QD=5.28;ReadPosRankSum=6.074;VQSLOD=2.2413;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:38:87.28:0,87,1812	0/0:17,0:16:48.14:0,48,912	0/0:42,0:11:20.11:0,20,369	0/0:65,0:30:52.58:0,53,927	0/0:19,0:15:42.03:0,42,734	0/0:17,0:17:39.05:0,39,648	0/0:59,0:59:99:0,172,3523	0/0:32,0:32:84.28:0,84,1661	0/0:53,0:53:99:0,147,3044	0/0:27,0:20:7.39:0,7,176	0/0:11,0:6:2.97:0,3,20	0/1:37,0:37:76.92:217,0,77	1/1:25,0:23:23.74:214,24,0	0/1:35,0:35:99:178,0,126	0/0:62,0:62:99:0,178,3507	0/1:40,0:40:80.60:342,0,81	0/1:28,1:29:61.59:101,0,62	0/1:19,1:20:4.57:166,0,5	0/1:14,0:7:32.81:33,0,56	0/1:21,0:17:9.09:9,0,67	0/1:44,3:44:99:181,0,118	0/0:20,0:15:3:0,3,25	1/1:11,0:5:6.13:25,6,0	1/1:38,4:41:37.82:403,38,0	0/0:19,0:18:27.26:0,27,784	0/0:37,0:34:93.30:0,93,1887	0/0:26,0:25:78.27:0,78,1546	0/0:9,0:9:21.04:0,21,359
chr10	19795115	.	ACAG	A	3479.01	PASS	AB=0.993;AC=24;AF=0.429;AN=56;BaseQRankSum=13.927;DP=887;FS=12.761;HRun=0;HaplotypeScore=190.2825;InbreedingCoeff=0.6499;MQ=47.11;MQ0=30;MQRankSum=-11.050;QD=9.16;ReadPosRankSum=-1.211;VQSLOD=2.3608;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:39:87.24:0,87,1714	0/0:18,0:18:48.07:0,48,898	0/0:52,0:16:34.88:0,35,531	0/0:62,0:29:70.88:0,71,1098	0/0:21,0:17:41.97:0,42,751	0/0:15,0:15:36.04:0,36,684	0/0:61,0:61:99:0,180,3596	0/0:29,0:29:81.25:0,81,1638	0/0:52,0:52:99:0,150,3079	1/1:24,0:19:15.79:157,16,0	1/1:6,7:8:8.86:59,9,0	0/1:36,1:37:27.11:380,0,27	1/1:21,3:22:33.04:374,33,0	0/1:33,0:33:30.61:355,0,31	0/0:64,0:64:99:0,168,3384	0/1:42,0:42:59.19:524,0,59	1/1:24,0:24:12.26:180,12,0	1/1:22,0:22:15.18:200,15,0	0/1:15,0:8:25.03:118,0,25	1/1:19,1:16:8.16:100,8,0	1/1:48,2:46:16.55:398,17,0	1/1:17,0:12:2.92:17,3,0	1/1:11,1:7:14.29:101,14,0	1/1:47,0:46:46.74:516,47,0	0/0:17,0:16:37.54:0,38,717	0/0:38,0:36:99:0,108,1968	0/0:28,0:27:84.21:0,84,1627	0/0:8,0:8:18.04:0,18,352
chr10	19795217	.	GCAACAGCAGCAA	G	10381.29	PASS	AB=0.853;AC=25;AF=0.446;AN=56;BaseQRankSum=8.983;DP=712;FS=4.600;HRun=0;HaplotypeScore=253.7165;InbreedingCoeff=0.7940;MQ=59.09;MQ0=8;MQRankSum=-12.874;QD=39.47;ReadPosRankSum=-0.107;VQSLOD=4.0192;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:26:54.13:0,54,2094	0/0:8,0:8:18.05:0,18,888	0/0:36,0:26:60.58:0,61,1803	0/0:49,0:36:59.50:0,60,2196	0/0:19,0:18:42.04:0,42,1368	0/0:17,0:16:48.16:0,48,2160	0/0:55,0:55:99:0,150,6432	0/0:40,0:40:99:0,102,3674	0/0:52,0:52:99:0,141,6816	1/1:11,6:13:33.04:738,33,0	1/1:8,2:9:20.98:267,21,0	1/1:23,5:29:60.72:1099,61,0	1/1:13,7:20:36.89:922,37,0	1/1:16,5:22:42.96:1004,43,0	0/0:53,0:53:99:0,144,7239	1/1:11,5:16:26.88:706,27,0	0/1:12,4:19:27.06:813,0,27	0/1:9,0:10:62.94:329,0,63	1/1:10,1:7:18.03:294,18,0	1/1:9,5:14:33.08:720,33,0	0/1:18,12:30:3.23:1093,0,3	1/1:9,8:15:21.06:438,21,0	1/1:5,2:7:9.02:165,9,0	1/1:20,10:38:25.38:1790,25,0	0/0:23,0:23:60.16:0,60,2371	0/0:35,0:34:99:0,99,4405	0/0:26,0:26:71.76:0,72,2741	0/0:9,0:9:18.06:0,18,718
chr10	19795220	.	ACAGCAG	A	3485.92	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=13.492;DP=707;FS=11.331;HRun=0;HaplotypeScore=198.5657;InbreedingCoeff=0.3095;MQ=57.96;MQ0=11;MQRankSum=-11.860;QD=13.67;ReadPosRankSum=0.528;VQSLOD=1.9674;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:25:57.14:0,57,1752	0/0:8,0:8:21.04:0,21,557	0/0:36,0:24:65.94:0,66,1535	0/0:56,0:33:48.05:0,48,1889	0/0:19,0:18:38.91:0,39,1101	0/0:18,0:17:51.09:0,51,1519	0/0:54,0:54:99:0,153,4711	0/0:37,0:37:99:0,102,2971	0/0:49,0:49:99:0,141,4628	0/1:18,0:13:17.41:228,0,17	0/1:10,0:9:19.69:32,0,20	1/1:24,3:27:35.09:576,35,0	1/1:18,0:18:31.90:375,32,0	1/1:22,1:23:5.08:424,5,0	0/0:54,0:54:99:0,153,4770	0/1:14,0:14:12.71:195,0,13	0/1:19,0:19:87.99:298,0,88	0/1:11,0:11:59.02:59,0,164	0/1:10,0:6:8.74:40,0,9	0/1:14,0:14:9.83:177,0,10	1/1:31,0:28:20.14:326,20,0	0/1:16,0:14:1.83:104,0,2	1/1:7,0:7:7.23:52,7,0	0/1:37,0:37:27.82:600,0,28	0/0:22,0:22:60.20:0,60,1807	0/0:38,0:37:99:0,108,3155	0/0:25,0:25:71.82:0,72,2020	0/0:10,0:10:21.06:0,21,543
chr10	19795244	.	ACAG	A	95.75	PASS	AB=0.714;AC=1;AF=0.018;AN=56;BaseQRankSum=5.955;DP=721;FS=10.813;HRun=0;HaplotypeScore=195.4257;InbreedingCoeff=-0.0258;MQ=50.11;MQ0=22;MQRankSum=-5.385;QD=9.57;ReadPosRankSum=0.183;VQSLOD=2.0476;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:30:66.18:0,66,1362	0/0:10,0:9:27.09:0,27,643	0/0:32,0:14:35.27:0,35,672	0/0:54,0:19:38.95:0,39,828	0/0:16,0:15:24.08:0,24,522	0/0:14,0:14:42.14:0,42,1004	0/0:46,0:46:99:0,106,2998	0/0:28,0:28:78.23:0,78,1639	0/0:46,0:46:99:0,138,3098	0/0:19,1:14:35.60:0,36,506	0/0:10,0:8:15.05:0,15,292	0/0:19,0:19:29.31:0,29,482	0/0:23,0:23:58.51:0,59,820	0/0:31,0:31:75.41:0,75,989	0/0:51,0:51:99:0,154,3566	0/0:18,0:18:48.39:0,48,653	0/0:25,0:25:30.29:0,30,684	0/0:21,0:21:6.72:0,7,587	0/0:10,0:5:11.99:0,12,190	0/0:10,0:10:23.85:0,24,323	0/0:35,0:32:54.91:0,55,774	0/0:14,0:12:9.65:0,10,94	0/0:9,0:8:15.05:0,15,263	0/0:51,0:50:95.94:0,96,1335	0/0:24,0:24:52.32:0,52,1232	0/0:42,0:40:99:0,111,2427	0/0:20,0:20:60.17:0,60,1317	0/1:6,4:10:99:170,0,315
chr10	19795272	.	C	CA	13050.52	PASS	AB=0.924;AC=30;AF=0.536;AN=56;BaseQRankSum=11.027;DP=724;FS=0.000;HRun=0;HaplotypeScore=143.4331;InbreedingCoeff=0.8442;MQ=55.06;MQ0=3;MQRankSum=-12.806;QD=33.64;ReadPosRankSum=6.632;VQSLOD=3.8548;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:60.20:0,60,833	0/0:6,0:6:15.05:0,15,208	0/0:32,0:23:56.19:0,56,806	0/0:43,0:25:72.19:0,72,940	0/0:13,0:12:33.11:0,33,457	0/0:13,0:13:30.10:0,30,417	0/0:41,0:41:88.86:0,89,1544	0/0:19,0:19:49.55:0,50,708	0/0:42,0:42:99:0,108,1499	1/1:3,14:13:33.04:472,33,0	1/1:0,6:6:15.01:211,15,0	1/1:1,29:30:66.22:1026,66,0	1/1:0,32:31:90.30:1405,90,0	1/1:3,40:42:99:1782,114,0	0/0:52,0:52:99:0,138,1900	1/1:2,29:31:36.32:1150,36,0	1/1:3,31:34:88.85:1376,89,0	1/1:0,25:25:72.24:1116,72,0	1/1:0,2:2:6.02:96,6,0	1/1:1,8:8:24.08:371,24,0	1/1:5,40:41:89.79:1336,90,0	1/1:4,6:9:6.02:96,6,0	1/1:0,6:6:12.04:172,12,0	1/1:4,63:66:99:2371,154,0	0/1:22,1:23:2.73:3,0,499	0/0:30,0:30:84.26:0,84,1153	0/0:22,0:22:48.14:0,48,651	0/1:7,1:8:70.61:71,0,184
chr10	19795378	.	GCAGCAACAA	G	9622.37	PASS	AB=0.667;AC=25;AF=0.446;AN=56;BaseQRankSum=15.608;DP=698;FS=32.338;HRun=0;HaplotypeScore=223.3527;InbreedingCoeff=0.7012;MQ=51.15;MQ0=8;MQRankSum=-11.698;QD=34.12;ReadPosRankSum=0.732;VQSLOD=2.9976;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:30:66.42:0,66,1383	0/0:15,0:15:45.14:0,45,1413	0/0:38,0:19:11.93:0,12,469	0/0:45,0:25:47.88:0,48,921	0/0:13,0:13:24.18:0,24,238	0/0:14,0:14:30.07:0,30,889	0/0:63,0:63:99:0,177,5401	0/0:24,0:22:51.13:0,51,1156	0/0:40,1:41:27.69:0,28,4414	0/1:8,19:25:99:820,0,106	1/1:1,6:7:8.96:146,9,0	1/1:16,20:36:87.28:2000,87,0	1/1:8,30:38:78.03:1819,78,0	1/1:7,16:23:7.46:1466,7,0	0/0:46,0:45:99:0,129,5051	0/1:6,22:28:99:824,0,157	1/1:12,8:20:12.24:805,12,0	1/1:9,5:14:15.12:551,15,0	1/1:2,5:5:9.03:153,9,0	1/1:1,4:5:9.03:217,9,0	0/1:29,6:28:27.36:254,0,27	1/1:7,0:7:9:98,9,0	1/1:2,5:6:2.85:58,3,0	1/1:21,7:28:24.08:413,24,0	0/0:16,0:15:36.35:0,36,751	0/0:26,0:26:72.18:0,72,1726	0/0:35,0:35:99:0,102,3832	0/0:8,0:8:24.08:0,24,882
chr10	19795387	.	ACAG	A	921.49	PASS	AB=0.976;AC=13;AF=0.232;AN=56;BaseQRankSum=12.033;DP=687;FS=16.740;HRun=0;HaplotypeScore=182.0402;InbreedingCoeff=-0.0208;MQ=47.47;MQ0=13;MQRankSum=-12.976;QD=3.57;ReadPosRankSum=5.773;VQSLOD=1.3731;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:29:47.71:0,48,664	0/0:16,0:16:47.85:0,48,731	0/0:42,0:15:13.81:0,14,242	0/0:46,1:21:46.19:0,46,574	0/0:13,0:12:12.45:0,12,112	0/0:14,0:14:30.02:0,30,504	0/0:57,0:57:99:0,152,2743	0/0:18,0:16:39.10:0,39,636	0/0:42,0:42:99:0,105,2282	0/1:20,6:24:99:212,0,118	1/1:6,1:7:2.94:18,3,0	0/1:35,0:35:99:211,0,103	0/1:37,0:37:93.26:185,0,93	0/1:29,0:29:99:159,0,116	0/0:45,0:44:99:0,126,2519	0/1:26,0:26:80.86:81,0,149	0/1:17,0:17:20.76:96,0,21	0/1:14,0:14:45.66:46,0,139	0/0:7,0:5:5.76:0,6,36	1/1:5,0:5:5.88:36,6,0	0/1:39,1:30:8.71:9,0,89	0/0:5,0:5:3.01:0,3,37	0/0:6,0:5:2.84:0,3,14	0/1:22,0:22:19.98:20,0,60	0/0:15,0:13:23.80:0,24,372	0/0:27,0:27:62.82:0,63,775	0/0:35,0:35:98.93:0,99,1775	0/0:8,0:8:21.06:0,21,359
chr10	19795438	.	ACAGTAGCAACAG	A	9846.11	PASS	AB=0.644;AC=22;AF=0.393;AN=56;BaseQRankSum=16.265;DP=661;FS=24.882;HRun=0;HaplotypeScore=249.1493;InbreedingCoeff=0.6366;MQ=46.55;MQ0=18;MQRankSum=-14.201;QD=38.92;ReadPosRankSum=2.482;VQSLOD=2.7701;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:66.21:0,66,2395	0/0:11,0:11:30.08:0,30,863	0/0:53,0:18:54.07:0,54,999	0/0:54,0:34:81.58:0,82,1441	0/0:14,0:14:39.11:0,39,950	0/0:12,0:10:20.15:0,20,1015	0/0:60,0:60:99:0,151,5959	0/0:21,0:21:60.19:0,60,1585	0/0:35,0:35:99:0,99,4342	1/1:14,2:15:0.86:606,1,0	0/1:1,5:6:4.37:49,0,4	1/1:8,27:34:57.19:1780,57,0	1/1:19,10:29:77.83:1819,78,0	1/1:15,10:25:71.94:1639,72,0	0/0:44,0:44:99:0,120,4922	0/1:13,7:20:99:941,0,392	1/1:14,3:17:9.97:597,10,0	1/1:12,4:15:18.46:901,18,0	0/0:6,0:4:5.70:0,6,29	1/1:1,11:11:12.01:298,12,0	1/1:29,9:23:13.35:512,13,0	1/1:0,9:9:3.01:113,3,0	0/1:1,4:5:7.41:49,0,7	0/1:16,9:25:26.51:543,0,27	0/0:7,0:7:21.07:0,21,572	0/0:32,0:30:84.27:0,84,2458	0/0:25,0:25:69.21:0,69,2696	0/0:5,0:5:14.99:0,15,353
chr10	19795441	.	GTAGCAA	G	2945.77	PASS	AB=0.905;AC=14;AF=0.250;AN=56;BaseQRankSum=13.929;DP=648;FS=4.523;HRun=0;HaplotypeScore=203.6177;InbreedingCoeff=0.0324;MQ=47.07;MQ0=13;MQRankSum=-12.074;QD=12.27;ReadPosRankSum=6.909;VQSLOD=2.1694;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:26:66.15:0,66,2035	0/0:10,0:10:30.09:0,30,873	0/0:51,0:20:60.13:0,60,1163	0/0:56,0:34:85.19:0,85,1951	0/0:16,0:16:48.13:0,48,1279	0/0:12,0:11:23.12:0,23,982	0/0:58,0:58:99:0,154,5698	0/0:21,0:21:63.21:0,63,1854	0/0:34,0:34:85.32:0,85,3348	0/1:13,0:13:97.58:98,0,140	0/0:6,0:6:5.21:0,5,22	1/1:33,0:32:26.33:565,26,0	0/1:28,0:28:99:401,0,325	0/1:25,0:25:99:374,0,238	0/0:43,0:43:99:0,120,4248	0/1:20,1:21:99:239,0,547	0/1:12,3:15:72.41:187,0,72	0/1:12,4:15:62.49:501,0,62	0/0:5,0:3:6.02:0,6,99	0/1:11,0:11:4.42:75,0,4	0/1:32,5:24:99:103,0,158	1/1:9,0:9:3.01:44,3,0	0/1:4,1:5:8.40:64,0,8	0/1:18,9:27:54.11:456,0,54	0/0:9,0:9:27.01:0,27,620	0/0:29,0:29:87.27:0,87,2410	0/0:26,0:26:75.23:0,75,2387	0/0:5,0:5:14.99:0,15,347
chr10	19798092	.	TAAACAAAC	T	6108.22	PASS	AB=0.741;AC=31;AF=0.554;AN=56;BaseQRankSum=-9.873;DP=412;FS=0.000;HRun=0;HaplotypeScore=139.5529;InbreedingCoeff=0.2470;MQ=51.52;MQ0=3;MQRankSum=-1.087;QD=19.27;ReadPosRankSum=-0.851;VQSLOD=3.9959;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,8:13:5.93:153,6,0	1/1:5,7:12:18.06:421,18,0	0/0:10,0:7:6.02:0,6,177	0/0:7,0:6:5.99:0,6,85	1/1:6,20:26:38.63:583,39,0	1/1:6,13:19:24.08:584,24,0	1/1:4,8:12:9.03:230,9,0	0/0:35,0:35:38.14:0,38,660	1/1:4,9:13:15.05:383,15,0	0/1:8,0:13:43.63:91,0,44	0/0:3,0:14:27.25:0,27,133	0/1:6,0:9:26.65:55,0,27	0/1:12,0:19:82.52:156,0,83	0/1:6,0:12:35.57:111,0,36	1/1:11,22:33:36.12:920,36,0	0/0:8,0:12:23.41:0,23,114	0/1:11,0:14:30.03:89,0,30	0/0:4,0:5:7.79:0,8,53	0/1:17,0:16:18.93:19,0,111	0/1:10,0:23:62.26:62,0,124	0/1:3,0:4:13.94:30,0,14	0/0:0,0:3:4.26:0,4,13	0/1:3,0:7:14.49:14,0,77	0/0:3,0:9:7.44:0,7,41	1/1:4,10:14:12.04:307,12,0	1/1:9,19:28:32.71:1131,33,0	1/1:8,9:17:18.06:460,18,0	1/1:1,9:10:12.04:307,12,0
chr10	19798761	.	CCT	C	11790.41	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=13.973;DP=841;FS=2.003;HRun=0;HaplotypeScore=126.3446;InbreedingCoeff=0.9998;MQ=64.15;MQ0=9;MQRankSum=2.808;QD=31.61;ReadPosRankSum=4.685;VQSLOD=6.9755;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:63.21:0,63,1057	0/0:15,0:15:45.15:0,45,767	0/0:46,0:26:44.03:0,44,630	0/0:69,1:43:79.29:0,79,1027	0/0:36,0:36:96.31:0,96,1601	0/0:28,0:28:78.25:0,78,1290	0/0:21,0:21:63.19:0,63,1025	0/0:46,0:46:99:0,114,1922	0/0:23,0:23:60.21:0,60,1020	1/1:4,24:28:72.23:945,72,0	1/1:8,18:25:45.15:591,45,0	1/1:0,20:20:54.18:710,54,0	1/1:1,25:26:66.69:869,67,0	1/1:2,27:29:66.21:868,66,0	0/0:29,0:29:75.24:0,75,1260	1/1:2,28:30:26.79:934,27,0	1/1:6,28:33:84.07:1090,84,0	1/1:3,13:16:36.11:543,36,0	1/1:3,26:29:75.21:949,75,0	1/1:3,27:30:72.19:927,72,0	1/1:6,19:25:49.96:883,50,0	1/1:3,22:25:60.20:789,60,0	1/1:4,15:19:42.14:552,42,0	1/1:10,26:35:87.24:1141,87,0	0/0:28,0:27:78.05:0,78,1255	0/0:34,1:35:65.90:0,66,1658	0/0:33,0:31:99:0,99,1643	0/0:31,0:33:79.87:0,80,1385
chr10	19798879	.	GTC	G	12783.98	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=16.298;DP=838;FS=0.000;HRun=0;HaplotypeScore=137.1921;InbreedingCoeff=0.9964;MQ=63.35;MQ0=8;MQRankSum=-0.865;QD=29.66;ReadPosRankSum=3.779;VQSLOD=6.6062;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,102,1746	0/0:6,0:6:15.05:0,15,266	0/0:23,1:15:33.90:0,34,596	0/0:42,1:32:40.59:0,41,868	0/0:35,0:35:99:0,102,1756	0/0:20,0:20:54.18:0,54,942	0/0:35,0:35:96.33:0,96,1691	0/0:41,0:40:99:0,114,1886	0/0:24,0:24:66.21:0,66,1132	1/1:4,47:51:99:1886,141,0	1/1:6,12:18:33.11:453,33,0	1/1:0,19:19:51.17:694,51,0	1/1:3,25:28:63.21:863,63,0	1/1:2,22:24:48.16:659,48,0	0/0:37,0:37:99:0,111,1905	1/1:4,26:30:72.24:988,72,0	1/1:4,36:39:84.28:1145,84,0	1/1:8,16:24:59.91:770,60,0	1/1:1,22:23:63.18:828,63,0	1/1:4,25:29:33.06:453,33,0	1/1:2,46:48:99:1360,99,0	1/1:0,26:26:63.21:865,63,0	1/1:1,20:22:26.99:371,27,0	1/1:14,35:49:99:1447,108,0	0/0:20,0:20:57.18:0,57,983	0/0:31,0:31:78.27:0,78,1366	0/0:41,0:40:99:0,120,2081	0/0:10,0:10:17.89:0,18,467
chr10	19799028	.	C	CTCTG	24289.31	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-14.867;DP=937;FS=14.968;HRun=0;HaplotypeScore=170.7863;InbreedingCoeff=0.9882;MQ=71.02;MQ0=4;MQRankSum=-6.154;QD=48.77;ReadPosRankSum=0.424;VQSLOD=4.6424;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:36:99:0,102,1752	0/0:8,0:8:21.06:0,21,335	0/0:43,0:32:46.81:0,47,711	0/0:77,0:61:33.21:0,33,887	0/0:43,0:43:99:0,117,1963	0/0:23,0:23:66.17:0,66,1114	0/0:29,0:29:75.23:0,75,1234	1/1:15,23:39:82.15:1869,82,0	0/0:28,0:28:75.23:0,75,1246	1/1:8,39:48:99:2895,120,0	1/1:5,29:34:78.27:1954,78,0	1/1:5,16:24:48.16:1208,48,0	1/1:8,15:26:39.13:987,39,0	1/1:7,18:26:48.16:1219,48,0	0/0:31,0:31:84.27:0,84,1433	1/1:6,25:31:69.24:1751,69,0	1/1:13,13:26:63.63:1380,64,0	1/1:12,14:26:7.35:1147,7,0	1/1:14,13:25:51.17:1213,51,0	1/1:9,48:58:99:3094,123,0	1/1:12,11:23:48.10:1049,48,0	1/1:8,29:38:72.25:1812,72,0	1/1:7,21:30:57.20:1405,57,0	1/1:23,18:41:56.66:1306,57,0	0/0:32,0:32:93.27:0,93,1511	0/0:31,0:31:81.26:0,81,1354	0/0:33,0:33:90.27:0,90,1506	0/0:23,0:23:66.23:0,66,1147
chr10	19799228	.	T	TTCTCTG	16526.10	PASS	AB=0.981;AC=28;AF=0.500;AN=56;BaseQRankSum=10.055;DP=788;FS=5.992;HRun=0;HaplotypeScore=248.2726;InbreedingCoeff=0.8508;MQ=61.97;MQ0=0;MQRankSum=-17.238;QD=41.42;ReadPosRankSum=-0.141;VQSLOD=4.0622;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,117,2136	0/0:7,0:7:15.05:0,15,314	0/0:41,0:36:31.75:0,32,1038	0/0:42,0:38:63.21:0,63,1013	0/0:39,0:39:99:0,99,1799	0/0:22,0:22:54.17:0,54,1081	0/0:21,0:21:51.09:0,51,885	0/0:38,0:38:87.19:0,87,1568	0/0:27,0:27:69.22:0,69,1434	1/1:31,13:44:95.53:2519,96,0	1/1:15,1:16:29.89:577,30,0	1/1:21,10:31:69.21:1767,69,0	1/1:26,9:36:81.19:2199,81,0	1/1:17,5:22:42.13:1042,42,0	0/0:31,0:31:84.23:0,84,1573	1/1:25,12:37:84.13:2171,84,0	1/1:18,5:23:33.58:877,34,0	1/1:13,2:15:10.37:405,10,0	0/1:16,0:15:6.04:584,0,6	1/1:28,10:38:69.24:1894,69,0	1/1:8,10:18:7.37:90,7,0	1/1:26,4:30:54.10:1052,54,0	1/1:22,4:24:45.06:929,45,0	1/1:19,3:22:20.69:368,21,0	0/0:22,0:22:54.17:0,54,1047	0/1:24,1:25:52.34:52,0,1210	0/0:33,0:32:81.20:0,81,1551	0/0:16,0:16:21.02:0,21,335
chr10	19799252	.	CTGTGT	C	1725.87	PASS	AB=0.819;AC=12;AF=0.214;AN=56;BaseQRankSum=15.792;DP=766;FS=3.107;HRun=0;HaplotypeScore=279.1055;InbreedingCoeff=-0.2907;MQ=62.66;MQ0=0;MQRankSum=-14.523;QD=5.31;ReadPosRankSum=4.532;VQSLOD=2.2926;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,136,4634	0/0:6,0:6:18.06:0,18,594	0/0:44,0:38:71.93:0,72,2766	0/0:43,0:41:92.43:0,92,2202	0/0:35,0:35:99:0,102,3367	0/0:27,0:27:81.28:0,81,2637	0/0:23,0:23:66.23:0,66,2176	0/0:39,0:39:99:0,117,3593	0/0:25,0:25:75.26:0,75,2445	0/1:31,5:36:99:201,0,591	0/1:18,4:22:48.17:48,0,193	0/1:26,6:32:99:182,0,359	0/1:25,10:35:99:189,0,348	0/1:8,6:14:18.94:223,0,19	0/0:34,0:34:99:0,102,3378	0/1:25,7:32:99:341,0,228	0/1:28,3:31:61.85:158,0,62	0/0:12,0:12:3.43:0,3,239	0/1:11,3:14:99:144,0,494	0/1:28,9:37:99:127,0,453	0/0:13,1:14:2.56:0,3,178	0/1:18,7:25:99:116,0,278	0/1:19,10:28:99:118,0,246	0/1:16,2:18:27.44:27,0,225	0/0:26,0:26:75.26:0,75,2393	0/0:30,0:30:81.32:0,81,2669	0/0:24,0:24:69.24:0,69,2277	0/0:8,0:8:24.08:0,24,781
chr10	19799254	.	GTGTCTCTCTGTTTC	G	15898.36	PASS	AB=0.938;AC=29;AF=0.518;AN=56;BaseQRankSum=17.172;DP=765;FS=0.000;HRun=0;HaplotypeScore=349.0828;InbreedingCoeff=0.9004;MQ=63.23;MQ0=0;MQRankSum=-17.785;QD=42.06;ReadPosRankSum=2.698;VQSLOD=3.0022;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,137,7481	0/0:6,0:6:18.06:0,18,962	0/0:41,0:37:59.79:0,60,1928	0/0:45,0:42:67.27:0,67,2044	0/0:37,0:37:84.29:0,84,5017	0/0:27,0:27:72.20:0,72,4110	0/0:23,0:23:51.16:0,51,2396	0/0:38,0:38:81.25:0,81,3573	0/0:25,0:25:63.19:0,63,3312	1/1:20,17:38:75.08:2202,75,0	1/1:7,15:22:29.97:851,30,0	1/1:17,14:31:51.13:1505,51,0	1/1:20,15:35:78.07:1924,78,0	1/1:9,5:14:27.09:887,27,0	0/0:35,0:35:96.32:0,96,5795	1/1:18,14:32:63.11:1957,63,0	1/1:13,18:31:33.08:1067,33,0	1/1:6,4:10:15.02:518,15,0	1/1:10,4:14:10.07:858,10,0	1/1:19,17:36:56.85:1311,57,0	1/1:14,0:14:5.01:140,5,0	1/1:12,12:24:27.01:767,27,0	1/1:14,14:27:47.91:1285,48,0	1/1:13,6:19:23.20:583,23,0	0/0:25,0:25:66.21:0,66,3756	0/1:28,2:30:43.04:43,0,4164	0/0:23,0:23:54.13:0,54,3129	0/0:8,0:8:21.07:0,21,1390
chr10	19799258	.	C	CA	73.77	PASS	AB=0.824;AC=9;AF=0.161;AN=56;BaseQRankSum=10.147;DP=755;FS=0.000;HRun=0;HaplotypeScore=233.8668;InbreedingCoeff=-0.1879;MQ=63.94;MQ0=0;MQRankSum=-8.859;QD=0.32;ReadPosRankSum=6.744;VQSLOD=2.0363;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,148,2055	0/0:7,0:7:21.04:0,21,274	0/0:39,0:35:94.13:0,94,1190	0/0:45,0:42:73.79:0,74,1027	0/0:39,0:39:99:0,114,1557	0/0:26,0:26:78.26:0,78,1091	0/0:25,0:25:69.20:0,69,942	0/0:33,0:33:99:0,99,1340	0/0:23,0:23:69.23:0,69,964	0/1:32,5:37:15.72:16,0,608	0/0:18,4:22:22.36:0,22,236	0/1:24,6:30:1.77:2,0,388	0/0:25,10:35:9.87:0,10,596	0/1:7,6:13:37.99:38,0,69	0/0:36,0:36:99:0,105,1469	0/1:23,7:30:16.72:17,0,329	0/1:25,3:28:22.82:23,0,131	0/0:11,0:11:21.30:0,21,186	0/1:12,3:15:54.82:55,0,214	0/1:26,9:35:4.48:4,0,458	0/0:11,1:12:11.51:0,12,113	0/1:14,7:21:20.15:20,0,210	0/0:18,10:27:1.75:0,2,282	0/1:23,2:25:30.32:30,0,166	0/0:25,0:25:72.22:0,72,987	0/0:28,0:28:80.94:0,81,1102	0/0:25,0:25:69.23:0,69,962	0/0:8,0:8:24.05:0,24,316
chr10	19799264	.	GTTTC	G	4422.38	PASS	AB=0.798;AC=14;AF=0.250;AN=56;BaseQRankSum=14.928;DP=735;FS=9.248;HRun=0;HaplotypeScore=241.1667;InbreedingCoeff=-0.3123;MQ=64.98;MQ0=0;MQRankSum=-14.304;QD=13.86;ReadPosRankSum=5.563;VQSLOD=2.9680;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:57:99:0,130,3957	0/0:10,0:10:30.10:0,30,753	0/0:45,0:39:97.81:0,98,1958	0/0:40,0:39:63.11:0,63,1480	0/0:35,0:35:96.32:0,96,2615	0/0:26,0:26:78.24:0,78,1968	0/0:23,0:23:66.22:0,66,1655	0/0:34,0:34:99:0,99,2488	0/0:23,0:23:69.23:0,69,1790	0/1:23,6:29:85.42:647,0,85	0/1:15,4:20:41.45:181,0,41	0/1:22,6:28:99:379,0,144	0/1:23,10:33:99:401,0,154	0/1:6,6:12:9.60:295,0,10	0/0:35,0:35:99:0,105,2842	0/1:21,7:28:99:532,0,101	0/1:23,3:26:15.86:303,0,16	0/1:10,1:11:21.47:181,0,21	0/1:8,6:14:39.60:425,0,40	0/1:25,9:34:99:308,0,131	0/1:11,1:12:18.01:18,0,34	0/1:14,7:21:37.40:225,0,37	0/1:16,10:25:63.06:298,0,63	0/1:18,7:25:33.90:227,0,34	0/0:26,0:27:78.27:0,78,2122	0/0:29,0:29:55.26:0,55,2196	0/0:22,0:22:66.19:0,66,1685	0/0:7,0:7:21.07:0,21,586
chr10	19799266	.	TTC	T	1176.60	PASS	AB=0.994;AC=22;AF=0.393;AN=56;BaseQRankSum=15.981;DP=729;FS=5.144;HRun=0;HaplotypeScore=227.2123;InbreedingCoeff=0.4874;MQ=65.81;MQ0=0;MQRankSum=-14.506;QD=3.77;ReadPosRankSum=4.876;VQSLOD=2.3101;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:55,1:56:99:0,157,2826	0/0:10,0:10:30.10:0,30,564	0/0:45,0:37:78.76:0,79,1422	0/0:45,0:43:62.04:0,62,1162	0/0:33,0:33:96.32:0,96,1821	0/0:26,0:26:75.23:0,75,1371	0/0:23,0:23:69.22:0,69,1227	0/0:33,0:33:96.32:0,96,1774	0/0:23,0:23:66.23:0,66,1247	0/1:28,0:28:8.51:160,0,9	1/1:20,0:20:5.43:51,5,0	0/1:26,1:27:30.34:103,0,30	0/1:32,0:32:81.43:109,0,81	0/1:12,0:12:9.85:73,0,10	0/0:36,0:36:99:0,108,2031	0/1:28,0:28:0.01:160,0,0	1/1:23,2:25:8.63:93,9,0	1/1:10,1:11:19.58:111,20,0	0/1:13,0:13:6.15:120,0,6	1/1:32,0:32:11.11:111,11,0	1/1:11,1:12:1.46:11,1,0	1/1:20,0:20:2.30:70,2,0	1/1:26,0:25:28.08:136,28,0	1/1:26,0:26:0.73:53,1,0	0/0:27,0:27:78.27:0,78,1495	0/0:30,0:30:73.16:0,73,1584	0/0:22,0:22:66.17:0,66,1194	0/0:7,0:7:21.07:0,21,403
chr10	19799460	.	TG	T	12955.41	PASS	AB=0.923;AC=29;AF=0.518;AN=56;BaseQRankSum=14.821;DP=690;FS=2.816;HRun=2;HaplotypeScore=74.8181;InbreedingCoeff=0.9326;MQ=78.11;MQ0=0;MQRankSum=-4.542;QD=33.30;ReadPosRankSum=5.162;VQSLOD=4.9353;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:96.80:0,97,1437	0/0:11,0:11:27.09:0,27,405	0/0:15,0:16:47.15:0,47,629	0/0:20,0:20:41.51:0,42,717	0/0:41,0:41:99:0,113,1664	0/0:18,0:18:54.18:0,54,809	0/0:23,0:23:69.22:0,69,1013	0/0:32,0:32:87.29:0,87,1296	0/0:21,0:21:63.21:0,63,942	1/1:0,31:31:90.29:1168,90,0	1/1:0,29:29:78.25:1013,78,0	1/1:0,26:26:69.22:894,69,0	1/1:0,29:29:75.01:972,75,0	1/1:0,25:25:66.21:856,66,0	0/0:33,0:33:99:0,99,1483	1/1:0,29:29:84.27:1090,84,0	1/1:1,26:27:72.23:935,72,0	1/1:0,9:9:27.09:351,27,0	1/1:0,25:25:75.24:973,75,0	1/1:0,35:35:96.31:1246,96,0	1/1:0,21:21:63.20:814,63,0	1/1:0,27:27:75.24:974,75,0	1/1:1,33:34:84.24:1073,84,0	1/1:1,17:18:44.99:584,45,0	0/0:24,0:24:72.23:0,72,1043	0/1:22,2:24:11.70:12,0,772	0/0:18,0:18:51.17:0,51,761	0/0:11,0:11:27.06:0,27,363
chr10	19799911	.	T	TAC	3583.88	PASS	AB=1.000;AC=27;AF=0.482;AN=56;BaseQRankSum=4.991;DP=674;FS=3.628;HRun=0;HaplotypeScore=143.2710;InbreedingCoeff=0.8465;MQ=54.01;MQ0=19;MQRankSum=-1.157;QD=14.28;ReadPosRankSum=-1.549;VQSLOD=3.5088;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:65,0:65:99:0,153,1850	0/0:12,0:12:2.14:0,2,287	0/0:37,0:7:5.93:0,6,54	0/0:45,1:13:6.58:0,7,81	0/0:32,0:32:62.73:0,63,787	0/0:19,1:20:30.10:0,30,387	0/0:25,0:25:60.19:0,60,777	1/1:21,24:42:74.53:1079,75,0	0/0:39,0:39:75.23:0,75,974	1/1:20,0:20:44.53:483,45,0	0/1:14,0:14:0:0,0,0	1/1:19,0:19:26.57:279,27,0	1/1:19,0:19:15.97:120,16,0	1/1:14,0:13:24.51:229,25,0	0/0:35,0:35:72.07:0,72,904	1/1:17,0:17:21.17:279,21,0	1/1:13,0:13:16.94:188,17,0	1/1:15,0:15:18.63:218,19,0	1/1:11,0:11:0.89:87,1,0	1/1:17,0:16:20.81:182,21,0	1/1:22,0:19:8.98:112,9,0	1/1:12,0:12:14.40:130,14,0	1/1:13,0:12:16.50:197,16,0	0/0:17,0:17:0:0,0,0	0/0:22,0:22:24.04:0,24,283	0/0:40,0:40:56.50:0,56,1262	0/0:25,0:25:39.08:0,39,458	0/0:8,0:8:21.03:0,21,251
chr10	19799917	.	CACAT	C	4302.47	PASS	AB=0.778;AC=28;AF=0.500;AN=56;BaseQRankSum=11.075;DP=695;FS=5.444;HRun=0;HaplotypeScore=171.8215;InbreedingCoeff=0.7660;MQ=49.42;MQ0=20;MQRankSum=-5.106;QD=13.62;ReadPosRankSum=-1.000;VQSLOD=4.2917;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:70,0:70:99:0,176,3325	0/0:14,0:14:28.91:0,29,664	0/0:36,0:3:2.12:0,2,67	0/0:48,0:13:14.19:0,14,99	0/0:32,0:32:69.57:0,70,1498	0/0:21,0:21:35.88:0,36,716	0/0:25,0:25:63.13:0,63,1297	0/1:42,0:39:99:156,0,605	0/0:38,0:38:84.22:0,84,1797	1/1:17,5:22:54.34:653,54,0	0/1:3,11:14:0:0,0,0	1/1:11,5:15:32.42:399,32,0	1/1:17,5:22:38.24:610,38,0	1/1:14,3:16:26.92:381,27,0	0/0:38,0:38:63.75:0,64,1618	1/1:15,3:18:26.85:298,27,0	1/1:8,3:12:20.92:245,21,0	1/1:12,4:16:35.45:471,35,0	1/1:10,2:12:26.54:292,27,0	1/1:10,6:15:19.16:308,19,0	1/1:16,5:18:8.63:66,9,0	1/1:12,3:15:15:186,15,0	1/1:11,3:12:17.98:221,18,0	0/1:3,13:15:0:0,0,0	0/0:24,0:24:27.01:0,27,541	0/1:43,0:43:15.97:16,0,2279	0/0:25,0:25:38.61:0,39,903	0/0:8,0:8:24.06:0,24,473
chr10	19799919	.	CAT	C	2992.39	PASS	AB=1.000;AC=27;AF=0.500;AN=54;BaseQRankSum=12.179;DP=685;FS=0.000;HRun=0;HaplotypeScore=154.1572;InbreedingCoeff=0.7398;MQ=49.22;MQ0=20;MQRankSum=-1.952;QD=11.00;ReadPosRankSum=-2.869;VQSLOD=2.5004;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:71,0:71:99:0,148,2297	0/0:14,0:14:7.98:0,8,423	0/0:36,0:3:1.95:0,2,26	0/0:46,0:12:3.57:0,4,64	0/0:33,0:33:59.88:0,60,1017	0/0:21,0:21:8.07:0,8,449	0/0:26,0:26:66.09:0,66,944	0/1:40,0:37:99:175,0,179	0/0:38,0:38:83.51:0,84,1227	1/1:18,2:20:54.30:498,54,0	./.	1/1:15,1:15:32.33:272,32,0	1/1:20,2:22:38.25:415,38,0	1/1:16,0:15:26.95:250,27,0	0/0:39,0:39:34.59:0,35,1075	1/1:14,4:18:26.75:228,27,0	1/1:11,0:11:20.90:172,21,0	1/1:15,1:16:35.48:347,35,0	1/1:11,1:12:26.73:234,27,0	1/1:14,2:15:19.81:197,20,0	1/1:18,1:16:8.54:67,9,0	1/1:14,1:15:15:144,15,0	1/1:11,3:12:17.98:176,18,0	0/1:14,0:13:0:0,0,0	0/1:23,0:23:22.56:23,0,308	0/0:43,0:43:28.94:0,29,1557	0/0:25,0:25:20.82:0,21,633	0/0:8,0:8:23.07:0,23,309
chr10	19799921	.	TAC	T	597.50	PASS	AB=0.986;AC=23;AF=0.426;AN=54;BaseQRankSum=10.945;DP=681;FS=12.275;HRun=0;HaplotypeScore=164.4065;InbreedingCoeff=0.6758;MQ=47.92;MQ0=21;MQRankSum=-3.440;QD=2.75;ReadPosRankSum=2.047;VQSLOD=1.8572;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:68,3:71:71.35:0,71,1688	0/0:14,0:14:31.84:0,32,384	0/0:37,0:3:3.01:0,3,36	0/0:44,0:10:10.72:0,11,78	0/0:31,0:31:51.54:0,52,826	0/0:22,0:22:31.25:0,31,374	0/0:25,0:25:50.98:0,51,589	0/0:37,0:34:57.72:0,58,483	0/0:41,0:41:60.56:0,61,944	1/1:20,0:20:0.82:98,1,0	./.	1/1:16,0:15:7.16:59,7,0	1/1:23,0:23:27.35:180,27,0	1/1:16,0:15:14.56:68,15,0	0/0:39,0:39:34.26:0,34,699	1/1:18,0:18:7.57:36,8,0	0/1:13,0:13:7.37:22,0,7	1/1:16,0:15:13.31:117,13,0	1/1:11,0:11:5.48:52,5,0	1/1:16,0:15:12.01:61,12,0	0/0:16,0:13:0:0,0,0	1/1:16,0:16:8.09:35,8,0	1/1:14,0:12:8.59:46,9,0	0/1:15,0:14:0:0,0,0	0/1:22,1:23:9.33:9,0,300	0/0:43,0:43:70.25:0,70,1173	0/0:22,1:23:11.46:0,11,468	0/0:8,0:8:21.03:0,21,293
chr10	19799937	.	CAG	C	112.50	PASS	AB=0.994;AC=16;AF=0.286;AN=56;BaseQRankSum=7.107;DP=637;FS=9.673;HRun=0;HaplotypeScore=161.9472;InbreedingCoeff=0.1727;MQ=45.04;MQ0=22;MQRankSum=-5.525;QD=0.46;ReadPosRankSum=-1.101;VQSLOD=2.1770;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:62,1:62:34.03:0,34,1556	0/0:20,0:20:35.89:0,36,427	0/0:32,0:3:3.01:0,3,43	0/0:31,0:6:3.01:0,3,48	0/0:29,3:31:24.18:0,24,778	0/0:28,0:28:23.59:0,24,455	0/1:24,1:25:19.26:19,0,463	0/0:31,0:25:39.11:0,39,280	0/1:37,1:38:5.77:6,0,803	0/1:16,0:16:13.38:41,0,13	0/1:9,0:9:0:0,0,0	0/1:15,0:14:7.85:8,0,10	1/1:25,0:24:14.87:82,15,0	0/1:14,0:12:5.67:8,0,6	0/1:37,0:37:14.92:15,0,664	0/1:16,0:15:13.53:14,0,14	1/1:12,0:12:0.26:16,0,0	1/1:15,0:14:6.67:29,7,0	0/1:9,0:8:5.09:18,0,5	0/0:16,0:15:3.30:0,3,21	0/0:12,0:10:0:0,0,0	0/0:14,0:14:2.60:0,3,10	0/0:12,0:10:1.55:0,2,4	0/1:14,0:12:0:0,0,0	0/0:22,4:24:23.89:0,24,415	0/0:39,1:40:39.87:0,40,927	0/0:25,0:25:23.93:0,24,474	0/0:10,0:10:24.35:0,24,307
chr10	19799957	.	GAC	G	1382.35	PASS	AB=0.937;AC=26;AF=0.481;AN=54;BaseQRankSum=12.654;DP=607;FS=35.901;HRun=0;HaplotypeScore=143.7713;InbreedingCoeff=0.7391;MQ=44.94;MQ0=26;MQRankSum=-8.259;QD=6.31;ReadPosRankSum=-1.240;VQSLOD=1.5747;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:64,0:63:99:0,136,2214	0/0:20,0:20:49.78:0,50,651	0/1:28,0:3:0.82:1,0,30	0/0:31,0:3:5.65:0,6,82	0/0:35,0:33:58.79:0,59,1006	0/0:31,0:31:44.67:0,45,682	0/0:29,0:29:72.41:0,72,917	0/1:20,0:18:49.70:55,0,50	0/0:36,0:34:60.30:0,60,1095	1/1:11,4:16:46.26:349,46,0	./.	1/1:5,5:10:13.66:86,14,0	1/1:6,7:14:35.74:292,36,0	1/1:7,4:9:5.92:48,6,0	0/0:39,0:39:40.25:0,40,1060	1/1:9,4:14:22.66:164,23,0	1/1:11,2:14:17.75:125,18,0	1/1:14,1:14:13.72:194,14,0	1/1:5,2:8:20.76:160,21,0	1/1:7,3:12:5.07:25,5,0	0/1:13,2:13:0.05:0,0,0	1/1:7,2:12:5.89:39,6,0	1/1:5,2:8:5.90:38,6,0	0/1:11,1:11:0:0,0,0	0/0:29,0:27:62.28:0,62,750	0/0:37,0:37:76.56:0,77,1287	0/0:22,0:22:55.60:0,56,737	0/0:10,0:9:9.83:0,10,353
chr10	19799961	.	GAC	G	1491.92	PASS	AB=0.965;AC=28;AF=0.519;AN=54;BaseQRankSum=12.365;DP=612;FS=43.716;HRun=0;HaplotypeScore=144.4012;InbreedingCoeff=0.7232;MQ=47.12;MQ0=25;MQRankSum=-9.446;QD=6.43;ReadPosRankSum=-1.550;VQSLOD=1.3581;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:61,0:60:99:0,125,2371	0/0:20,0:20:51.73:0,52,682	0/0:28,0:5:0.23:0,0,5	0/1:36,0:9:34.53:35,0,78	0/0:34,0:32:69.84:0,70,939	0/0:32,0:32:39.03:0,39,692	0/0:29,0:29:80.99:0,81,1174	1/1:19,0:17:27.64:188,28,0	0/0:38,0:36:49.79:0,50,1110	1/1:11,4:15:42.44:315,42,0	./.	1/1:5,5:9:11.82:79,12,0	1/1:8,7:14:35.72:291,36,0	1/1:6,4:8:5.97:51,6,0	0/0:40,0:40:74.98:0,75,1289	1/1:9,4:12:20.81:157,21,0	1/1:13,2:15:17.80:128,18,0	1/1:16,0:14:12.84:190,13,0	1/1:8,2:8:20.42:166,20,0	1/1:9,3:11:6:31,6,0	0/1:14,1:13:0.05:0,0,0	1/1:11,2:12:5.80:32,6,0	1/1:7,2:7:2.96:19,3,0	0/1:11,1:10:0.22:0,0,0	0/0:33,0:31:51.42:0,51,941	0/0:37,0:37:34.54:0,35,1211	0/0:23,0:23:39.10:0,39,869	0/1:12,0:11:0.63:1,0,310
chr10	19799963	.	CAG	C	112.51	PASS	AB=0.962;AC=20;AF=0.370;AN=54;BaseQRankSum=8.150;DP=612;FS=28.204;HRun=0;HaplotypeScore=149.5243;InbreedingCoeff=0.2994;MQ=47.20;MQ0=25;MQRankSum=-6.925;QD=0.43;ReadPosRankSum=2.791;VQSLOD=1.2606;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:57,2:58:93.81:0,94,1756	0/0:21,0:21:39.06:0,39,549	0/0:28,0:5:2.16:0,2,11	0/1:37,0:9:12.08:12,0,59	0/0:34,0:32:41.81:0,42,595	0/0:31,1:32:3.38:0,3,507	0/0:29,0:29:60.02:0,60,829	0/0:19,0:17:18.37:0,18,136	0/1:35,2:35:3.23:3,0,771	1/1:14,0:14:0.81:33,1,0	./.	1/1:11,0:10:6.21:23,6,0	1/1:15,0:14:16.05:76,16,0	1/1:11,0:9:5.01:21,5,0	0/0:35,4:39:34.47:0,34,960	0/1:13,0:12:1.58:12,0,2	1/1:15,0:15:3.72:22,4,0	0/1:16,0:14:0.67:1,0,15	1/1:11,0:9:1.80:22,2,0	0/0:13,0:12:2.07:0,2,25	0/0:16,0:14:0.47:0,0,1	0/1:14,0:13:0.79:1,0,21	0/0:9,0:7:0.89:0,1,2	0/1:10,0:8:0.22:0,0,0	0/0:33,0:31:18.27:0,18,666	0/1:31,3:34:19.91:20,0,830	0/1:20,4:24:11.46:11,0,719	0/0:12,0:11:23.94:0,24,283
chr10	19799982	.	AGAGTGTGT	A	5794.45	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=10.297;DP=615;FS=126.466;HRun=0;HaplotypeScore=188.2157;InbreedingCoeff=0.7496;MQ=58.82;MQ0=21;MQRankSum=-6.127;QD=25.75;ReadPosRankSum=-3.479;VQSLOD=1.1697;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:59,0:58:99:0,141,5744	0/0:18,0:18:48.16:0,48,1912	0/1:33,0:13:14.98:15,0,433	0/0:43,0:19:20.89:0,21,1050	0/0:28,0:27:60.68:0,61,2222	0/0:31,0:31:48.15:0,48,1848	0/0:26,0:26:66.14:0,66,2472	0/1:21,0:20:85.22:98,0,85	0/0:34,0:32:90.27:0,90,3164	1/1:13,0:12:26.81:689,27,0	1/1:6,0:5:6.02:98,6,0	1/1:12,0:11:8.97:199,9,0	1/1:14,0:13:39.12:823,39,0	1/1:12,0:12:20.99:408,21,0	0/0:41,0:41:93.26:0,93,3586	1/1:14,1:15:36.10:700,36,0	1/1:12,1:13:18.38:385,18,0	1/1:11,0:10:0.45:71,0,0	1/1:17,0:15:33.92:755,34,0	1/1:13,0:12:32.94:533,33,0	1/1:11,0:11:0.03:1,0,0	1/1:14,2:15:33.11:591,33,0	1/1:12,0:11:21.07:428,21,0	0/1:6,0:5:0:0,0,1	0/0:29,0:28:60.12:0,60,2188	0/0:35,0:35:99:0,99,3431	0/0:34,0:34:90.06:0,90,3332	0/0:12,0:11:33.11:0,33,1136
chr10	19799984	.	AGTGTGT	A	6061.24	PASS	AB=0.929;AC=28;AF=0.500;AN=56;BaseQRankSum=9.299;DP=613;FS=105.383;HRun=0;HaplotypeScore=169.8927;InbreedingCoeff=0.7994;MQ=60.84;MQ0=21;MQRankSum=-6.093;QD=31.24;ReadPosRankSum=-3.202;VQSLOD=1.1996;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:57:99:0,138,4389	0/0:17,0:17:48.16:0,48,1574	0/0:34,0:15:0.49:0,0,470	0/0:43,0:20:24.93:0,25,990	0/0:28,0:27:57.65:0,58,1774	0/0:28,0:28:45.15:0,45,1478	0/0:24,0:24:60.16:0,60,1890	0/1:21,0:20:16.47:184,0,16	0/0:34,0:33:87.26:0,87,2448	1/1:1,12:12:33.11:700,33,0	1/1:4,2:5:6.02:122,6,0	1/1:1,11:11:8.59:185,9,0	1/1:3,11:13:39.12:789,39,0	1/1:7,5:12:20.83:419,21,0	0/0:41,0:41:92.91:0,93,2874	1/1:7,8:15:36.12:685,36,0	1/1:10,3:13:17.91:359,18,0	1/1:6,5:10:2.98:70,3,0	1/1:6,11:15:36.10:753,36,0	1/1:7,7:13:35.91:639,36,0	1/1:1,10:11:0:0,0,0	1/1:11,5:15:33.11:620,33,0	1/1:8,5:12:24.08:537,24,0	0/1:5,1:5:0:0,0,1	0/0:28,0:28:57.14:0,57,1717	0/0:36,0:36:99:0,102,3038	0/0:34,0:34:93.32:0,93,2808	0/0:12,0:11:33.04:0,33,858
chr10	19800087	.	TA	T	5702.08	PASS	AC=30;AF=0.577;AN=52;BaseQRankSum=4.150;DP=644;FS=41.241;HRun=3;HaplotypeScore=62.8319;InbreedingCoeff=0.9641;MQ=36.03;MQ0=177;MQRankSum=-1.337;QD=18.82;ReadPosRankSum=0.961;VQSLOD=2.4653;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:35:63.08:0,63,836	0/0:16,0:12:24.08:0,24,345	./.	./.	0/0:33,0:25:63.17:0,63,874	0/0:26,0:21:36.08:0,36,495	0/0:23,0:16:42.10:0,42,572	1/1:5,16:13:36.10:434,36,0	0/0:31,0:25:63.21:0,63,899	1/1:2,28:22:60.19:743,60,0	1/1:2,15:15:24.07:297,24,0	1/1:2,20:15:27.07:322,27,0	1/1:1,34:31:63.06:780,63,0	1/1:5,17:19:57.18:705,57,0	0/0:32,0:28:63.18:0,63,882	1/1:2,16:13:30.09:372,30,0	1/1:2,22:18:30.08:362,30,0	1/1:2,11:7:18.03:207,18,0	1/1:2,13:10:24.07:295,24,0	1/1:5,11:12:21.06:257,21,0	1/1:2,13:7:6.02:74,6,0	1/1:5,11:13:24.07:297,24,0	1/1:3,12:11:21.07:260,21,0	1/1:2,22:16:24.08:297,24,0	0/0:18,0:14:36.12:0,36,518	0/0:28,1:23:32:0,32,890	0/0:31,0:23:44.87:0,45,626	0/0:6,0:4:6.02:0,6,86
chr10	19800148	.	CTTTG	C	6548.50	PASS	AC=28;AF=0.538;AN=52;BaseQRankSum=11.728;DP=641;FS=5.148;HRun=0;HaplotypeScore=70.2950;InbreedingCoeff=0.9610;MQ=32.21;MQ0=193;MQRankSum=-1.716;QD=23.73;ReadPosRankSum=4.459;VQSLOD=3.6869;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:38:63.14:0,63,1493	0/0:15,0:11:15.05:0,15,399	./.	./.	0/0:27,0:18:32.90:0,33,578	0/0:25,0:19:32.98:0,33,699	0/0:20,0:8:12.04:0,12,319	0/0:30,0:9:24.08:0,24,613	0/0:34,0:27:57.08:0,57,1317	1/1:8,14:12:30.10:557,30,0	1/1:2,15:11:24.08:448,24,0	1/1:5,14:10:15.05:277,15,0	1/1:7,12:14:24.08:447,24,0	1/1:3,13:11:24.08:447,24,0	0/0:36,0:25:45.15:0,45,1168	1/1:4,15:13:18.06:336,18,0	1/1:3,26:27:51.17:949,51,0	1/1:6,11:10:15.05:278,15,0	1/1:6,8:9:27.04:467,27,0	1/1:2,13:13:27.09:504,27,0	1/1:6,22:20:35.71:667,36,0	1/1:1,16:16:24.08:445,24,0	1/1:5,10:10:8.70:168,9,0	1/1:9,20:18:30.10:559,30,0	0/0:21,0:17:27.05:0,27,658	0/0:31,1:21:7.21:0,7,1516	0/0:25,0:16:29.62:0,30,798	0/0:8,0:8:15.05:0,15,400
chr10	19800686	.	T	TAC	802.36	PASS	AB=0.852;AC=16;AF=0.444;AN=36;BaseQRankSum=1.190;DP=458;FS=0.000;HRun=0;HaplotypeScore=87.5256;InbreedingCoeff=0.2090;MQ=24.72;MQ0=149;MQRankSum=-0.250;QD=4.80;ReadPosRankSum=0.050;VQSLOD=2.5322;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	0/1:8,0:5:4.41:4,0,30	./.	./.	./.	0/0:13,0:8:3.01:0,3,31	0/0:19,0:6:0.47:0,0,1	0/0:12,0:1:0.89:0,1,2	0/0:17,0:13:6.02:0,6,71	0/1:8,12:14:3.80:383,0,4	1/1:9,7:12:6.02:95,6,0	1/1:5,13:13:6.01:86,6,0	1/1:9,3:7:3.01:47,3,0	./.	0/0:24,0:14:3.01:0,3,35	1/1:7,9:14:5.75:58,6,0	1/1:4,4:4:5.75:59,6,0	./.	0/1:14,4:8:17.18:132,0,17	1/1:8,11:16:3.01:47,3,0	./.	0/0:10,6:10:0:0,0,0	./.	./.	0/0:22,2:18:2.63:0,3,14	0/1:25,1:19:2.56:3,0,401	0/0:21,1:13:2.80:0,3,35	./.
chr10	19800722	.	C	CACAGAGAGAGAG	1261.21	PASS	AB=0.762;AC=25;AF=0.521;AN=48;BaseQRankSum=1.316;DP=409;FS=5.323;HRun=0;HaplotypeScore=100.3775;InbreedingCoeff=0.6047;MQ=27.09;MQ0=65;MQRankSum=0.161;QD=6.78;ReadPosRankSum=-0.151;VQSLOD=1.1865;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:9:0.47:0,0,1	0/0:3,0:3:5.18:0,5,26	0/0:15,0:4:9.87:0,10,122	0/0:14,0:2:5.70:0,6,30	./.	0/0:4,0:7:3.01:0,3,88	1/1:7,0:4:0.47:1,0,0	0/0:15,0:6:17.93:0,18,296	0/0:12,0:17:18.04:0,18,290	1/1:16,0:13:29.53:244,30,0	1/1:18,0:15:8.66:138,9,0	1/1:10,1:9:3.77:20,4,0	1/1:12,0:9:8.92:182,9,0	1/1:20,1:20:2.94:25,3,0	./.	1/1:11,0:13:2.94:18,3,0	1/1:5,2:6:8.96:167,9,0	1/1:6,0:3:6.91:157,7,0	1/1:15,0:10:23.72:329,24,0	1/1:19,0:19:6.89:133,7,0	./.	0/0:11,2:13:0.47:0,0,2	0/1:11,3:13:0:0,0,0	1/1:13,3:12:0.94:1,1,0	0/0:16,0:11:3.01:0,3,84	0/0:12,0:14:14.13:0,14,249	0/0:10,0:8:7.30:0,7,127	./.
chr10	19800845	.	T	TA	11200.33	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=10.827;DP=655;FS=2.538;HRun=2;HaplotypeScore=106.7144;InbreedingCoeff=0.9997;MQ=70.54;MQ0=0;MQRankSum=-0.072;QD=36.25;ReadPosRankSum=0.838;VQSLOD=4.8250;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:22:60.19:0,60,740	0/0:13,0:13:39.12:0,39,483	0/0:20,0:20:60.16:0,60,716	0/0:10,0:10:26.24:0,26,292	0/0:23,0:23:63.18:0,63,768	0/0:30,0:25:69.22:0,69,850	0/0:15,0:13:36.11:0,36,434	0/0:40,0:33:99:0,99,1217	0/0:24,0:24:66.19:0,66,802	1/1:1,24:24:69.21:959,69,0	1/1:3,22:24:60.16:836,60,0	1/1:0,26:26:63.17:861,63,0	1/1:1,20:21:57.19:820,57,0	1/1:1,21:22:54.11:733,54,0	0/0:24,0:20:57.18:0,57,703	1/1:2,24:26:69.14:927,69,0	1/1:0,16:16:48.16:691,48,0	1/1:3,18:21:51.17:731,51,0	1/1:1,17:17:51.17:732,51,0	1/1:1,26:27:78.22:1094,78,0	1/1:0,16:16:42.14:605,42,0	1/1:2,24:26:69.21:966,69,0	1/1:0,20:21:51.17:727,51,0	1/1:3,16:19:36.12:519,36,0	0/0:39,0:37:99:0,105,1301	0/0:36,1:35:59.19:0,59,1184	0/0:36,0:36:99:0,102,1257	0/0:11,0:11:33.10:0,33,408
chr10	19801211	.	A	AC	11270.90	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-15.730;DP=692;FS=0.000;HRun=4;HaplotypeScore=64.1963;InbreedingCoeff=0.9997;MQ=93.51;MQ0=0;MQRankSum=-2.311;QD=34.68;ReadPosRankSum=3.770;VQSLOD=5.2295;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:90.25:0,90,1020	0/0:13,0:13:33.09:0,33,374	0/0:27,0:27:57.70:0,58,737	0/0:33,0:33:77.74:0,78,850	0/0:25,0:25:72.11:0,72,788	0/0:25,0:25:75.21:0,75,851	0/0:20,0:20:57.14:0,57,629	0/0:40,0:40:96.24:0,96,1065	0/0:23,0:23:66.17:0,66,739	1/1:2,29:31:87.23:1166,87,0	1/1:3,24:27:60.11:795,60,0	1/1:0,20:20:51.17:698,51,0	1/1:0,22:22:63.21:862,63,0	1/1:1,15:16:42.14:574,42,0	0/0:35,0:35:96.27:0,96,1088	1/1:1,25:26:38.23:910,38,0	1/1:1,19:20:51.17:697,51,0	1/1:1,12:13:33.11:451,33,0	1/1:4,12:16:36.09:459,36,0	1/1:2,35:37:96.32:1312,96,0	1/1:0,28:28:75.25:1026,75,0	1/1:4,21:25:54.18:737,54,0	1/1:5,20:25:63.20:845,63,0	1/1:0,19:19:54.18:739,54,0	0/0:22,0:22:60.15:0,60,669	0/0:28,1:29:30.89:0,31,713	0/0:28,0:28:84.22:0,84,942	0/0:12,0:12:27.04:0,27,293
chr10	19802404	.	GAC	G	8007.35	PASS	AB=0.780;AC=28;AF=0.500;AN=56;BaseQRankSum=15.100;DP=831;FS=2.674;HRun=0;HaplotypeScore=168.0097;InbreedingCoeff=0.8482;MQ=57.47;MQ0=20;MQRankSum=-6.839;QD=17.79;ReadPosRankSum=4.488;VQSLOD=5.1075;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:59,0:59:99:0,144,2101	0/0:11,0:11:32.94:0,33,427	0/0:53,0:19:23.34:0,23,186	0/1:79,0:34:11.13:11,0,354	0/0:30,0:30:89.78:0,90,1392	0/0:25,0:25:63.11:0,63,918	0/0:23,0:23:63.10:0,63,868	0/0:29,0:29:78.04:0,78,1008	0/0:22,0:22:60.07:0,60,879	1/1:18,17:33:89.97:992,90,0	1/1:2,14:16:23.98:303,24,0	1/1:9,23:32:81.19:998,81,0	1/1:8,28:34:72.04:864,72,0	1/1:6,21:27:48.06:595,48,0	0/0:29,0:29:75.13:0,75,1080	1/1:1,22:23:63.20:802,63,0	0/1:5,18:23:16.43:458,0,16	1/1:10,11:20:41.94:466,42,0	1/1:10,14:20:41.87:466,42,0	1/1:5,17:21:26.64:347,27,0	1/1:14,13:26:36.38:409,36,0	1/1:6,23:27:38.86:489,39,0	1/1:6,14:19:35.95:405,36,0	1/1:8,26:35:6.14:399,6,0	0/0:24,0:24:66.02:0,66,949	0/0:34,0:34:84.07:0,84,1207	0/0:32,0:32:81.05:0,81,1211	0/0:10,0:10:19.44:0,19,301
chr10	19802449	.	AGAGGGAGG	A	8855.47	PASS	AB=0.963;AC=29;AF=0.518;AN=56;BaseQRankSum=15.910;DP=645;FS=1.120;HRun=0;HaplotypeScore=191.5089;InbreedingCoeff=0.9028;MQ=53.83;MQ0=13;MQRankSum=-9.164;QD=28.38;ReadPosRankSum=-4.508;VQSLOD=3.6614;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,138,4535	0/0:10,0:10:29.99:0,30,1018	0/0:41,0:19:36.81:0,37,684	0/0:48,0:14:26.44:0,26,311	0/0:19,0:19:51.95:0,52,1568	0/0:24,0:23:66.19:0,66,2102	0/0:26,0:26:78.19:0,78,2202	0/0:21,0:15:44.15:0,44,897	0/0:24,0:23:69.14:0,69,1834	1/1:5,20:23:69.17:1525,69,0	1/1:7,6:13:23.61:198,24,0	1/1:3,25:28:60.03:1299,60,0	1/1:16,14:30:74.79:1151,75,0	1/1:12,9:20:46.97:671,47,0	0/0:26,0:25:69.17:0,69,2403	1/1:8,15:23:62.99:1170,63,0	1/1:10,5:14:29.30:391,29,0	1/1:3,14:17:24.01:521,24,0	1/1:11,6:13:36.09:777,36,0	1/1:8,6:13:29.88:373,30,0	1/1:6,27:32:3.49:28,3,0	1/1:8,5:11:20.86:255,21,0	1/1:1,16:17:17.79:210,18,0	1/1:11,8:19:31.85:274,32,0	0/0:14,0:14:42.11:0,42,1505	0/1:25,1:26:11.98:12,0,2497	0/0:18,0:18:54.15:0,54,1884	0/0:12,0:12:11.11:0,11,1107
chr10	19802455	.	AG	A	328.55	PASS	AB=0.993;AC=8;AF=0.143;AN=56;BaseQRankSum=10.061;DP=606;FS=1.018;HRun=7;HaplotypeScore=146.2518;InbreedingCoeff=0.1048;MQ=55.08;MQ0=13;MQRankSum=-8.509;QD=2.33;ReadPosRankSum=5.306;VQSLOD=-0.5602;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,132,1619	0/0:10,0:10:30.06:0,30,358	0/0:43,0:20:36.54:0,37,334	0/0:54,1:16:0.26:0,0,200	0/0:16,0:16:45.13:0,45,547	0/0:24,0:23:63.16:0,63,775	0/0:24,0:24:54.15:0,54,653	1/1:5,15:15:33.02:320,33,0	0/0:23,0:22:54.12:0,54,634	0/1:21,0:19:28.97:47,0,29	0/0:9,0:9:11.83:0,12,80	0/1:26,0:26:30.72:37,0,31	0/1:23,0:23:2.05:2,0,192	0/0:20,0:19:26.79:0,27,244	0/0:26,0:25:72.22:0,72,885	0/1:20,0:20:23.53:24,0,103	0/0:12,0:11:12.71:0,13,120	0/1:15,0:15:10.02:19,0,10	0/1:15,0:12:14.80:15,0,48	0/0:16,0:15:31.29:0,31,224	0/0:29,0:28:5.93:0,6,46	0/0:10,0:8:8.35:0,8,46	0/0:16,0:16:4.65:0,5,28	0/0:17,0:17:19.19:0,19,185	0/0:14,0:14:42.04:0,42,482	0/0:25,0:25:64.54:0,65,861	0/0:18,0:18:51.11:0,51,587	0/0:9,0:9:27.09:0,27,340
chr10	19802732	.	TA	T	5834.66	PASS	AC=28;AF=0.538;AN=52;BaseQRankSum=9.746;DP=730;FS=3.158;HRun=3;HaplotypeScore=58.4565;InbreedingCoeff=0.9537;MQ=35.81;MQ0=192;MQRankSum=-0.064;QD=16.81;ReadPosRankSum=2.601;VQSLOD=4.7079;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:38:42.14:0,42,604	0/0:15,0:9:24.08:0,24,341	./.	./.	0/0:25,0:19:36.12:0,36,517	0/0:24,0:20:39.05:0,39,515	0/0:17,0:13:33.04:0,33,414	0/0:35,3:27:81.26:0,81,1135	0/0:28,0:21:42.11:0,42,588	1/1:2,46:39:99:1282,105,0	1/1:0,20:14:21.07:260,21,0	1/1:1,22:21:42.13:521,42,0	1/1:2,23:19:33.10:407,33,0	1/1:0,22:19:39.12:483,39,0	0/0:27,0:24:57.19:0,57,820	1/1:2,28:20:1.99:474,2,0	1/1:1,27:24:27.08:334,27,0	1/1:0,13:11:21.06:256,21,0	1/1:5,15:7:18.06:223,18,0	1/1:0,23:19:48.15:594,48,0	1/1:3,29:24:30:372,30,0	1/1:0,21:15:18.06:220,18,0	1/1:0,25:13:15.05:186,15,0	1/1:0,17:12:18.06:223,18,0	0/0:27,0:22:45.15:0,45,646	0/0:30,0:21:60.16:0,60,838	0/0:30,0:20:45.09:0,45,624	0/0:13,0:6:9.03:0,9,130
chr10	19803994	.	TA	T	6885.63	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=13.574;DP=594;FS=4.802;HRun=7;HaplotypeScore=61.0162;InbreedingCoeff=0.9554;MQ=78.13;MQ0=0;MQRankSum=-0.442;QD=24.25;ReadPosRankSum=4.464;VQSLOD=5.2399;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,126,1543	0/0:17,0:17:48.15:0,48,604	0/0:14,0:14:30.03:0,30,317	0/1:13,0:13:1.72:2,0,197	0/0:25,0:25:66.19:0,66,805	0/0:22,0:22:66.18:0,66,794	0/0:21,0:21:54.14:0,54,641	0/0:23,0:23:63.16:0,63,745	0/0:22,0:22:66.18:0,66,803	1/1:5,21:26:60.12:606,60,0	1/1:2,17:19:45.06:448,45,0	1/1:0,21:21:57.13:581,57,0	1/1:3,11:14:30.06:306,30,0	1/1:0,20:20:57.13:581,57,0	0/0:38,0:38:99:0,108,1309	1/1:2,19:21:54.12:551,54,0	1/1:2,24:26:57.13:581,57,0	1/1:1,11:12:30.07:306,30,0	1/1:4,18:22:54.04:530,54,0	1/1:0,19:19:57.07:568,57,0	1/1:0,16:16:45.10:459,45,0	1/1:1,22:23:66.11:662,66,0	1/1:2,20:22:48.06:490,48,0	1/1:1,9:10:21.05:214,21,0	0/0:19,0:19:57.18:0,57,716	0/0:27,0:27:69.21:0,69,857	0/0:33,0:32:96.28:0,96,1181	0/0:6,0:6:18.06:0,18,226
chr10	19804641	.	AAC	A	2717.12	PASS	AB=1.000;AC=32;AF=0.571;AN=56;BaseQRankSum=-6.706;DP=364;FS=0.000;HRun=0;HaplotypeScore=51.7246;InbreedingCoeff=0.6143;MQ=65.07;MQ0=6;MQRankSum=-1.679;QD=13.52;ReadPosRankSum=-3.908;VQSLOD=1.9586;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:18:11.42:0,11,101	0/0:6,0:6:1.31:0,1,92	0/1:25,0:3:2.25:2,0,5	0/0:23,0:13:5.59:0,6,91	0/1:16,0:16:0.44:0,0,187	0/0:14,0:14:17.23:0,17,130	0/1:10,0:10:26.21:26,0,71	0/0:27,0:27:37.09:0,37,349	0/1:10,0:10:13.42:13,0,19	1/1:13,0:13:35.31:295,35,0	1/1:8,2:10:29.45:244,29,0	1/1:6,0:5:3.08:89,3,0	1/1:8,0:8:23.33:167,23,0	1/1:12,0:12:31.92:249,32,0	0/0:11,0:11:11.99:0,12,114	1/1:17,1:18:43.72:335,44,0	1/1:14,0:14:38.36:298,38,0	1/1:18,0:18:46.37:361,46,0	1/1:11,0:9:26.92:235,27,0	1/1:10,0:10:29.84:237,30,0	1/1:5,0:5:9:80,9,0	1/1:6,0:6:17.47:138,17,0	1/1:3,0:3:8.91:65,9,0	1/1:4,1:5:8.72:74,9,0	0/0:11,0:11:17.84:0,18,155	0/0:19,0:19:11.69:0,12,227	0/0:22,0:22:5.61:0,6,148	0/0:11,0:11:0.11:0,0,133
chr10	19804643	.	C	CA	1157.93	PASS	AB=0.869;AC=43;AF=0.768;AN=56;BaseQRankSum=-4.196;DP=367;FS=12.834;HRun=13;HaplotypeScore=54.7598;InbreedingCoeff=0.1665;MQ=65.46;MQ0=6;MQRankSum=0.319;QD=3.48;ReadPosRankSum=0.275;VQSLOD=-0.6725;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,9:16:0.34:41,0,0	1/1:6,0:6:6.01:56,6,0	0/1:25,0:3:6.04:6,0,11	0/1:22,0:13:3.57:4,0,25	1/1:3,15:18:19.13:257,19,0	1/1:3,11:14:9.01:84,9,0	1/1:9,0:9:12.02:85,12,0	0/1:24,0:27:23.29:65,0,23	1/1:1,11:12:5.96:47,6,0	1/1:13,0:13:0.61:1,1,0	0/0:10,0:10:6.37:0,6,19	0/0:6,0:5:5.12:0,5,27	1/1:8,0:8:1.41:19,1,0	0/1:12,0:12:1.50:1,0,7	1/1:3,8:11:3:28,3,0	0/0:18,0:18:0.39:0,0,3	1/1:14,0:14:3.07:7,3,0	1/1:18,0:18:0.51:2,1,0	1/1:12,0:10:4.82:28,5,0	1/1:11,0:11:3.46:24,3,0	0/1:4,0:4:0:0,0,0	1/1:6,0:6:0.47:1,0,0	1/1:4,0:4:3.46:25,3,0	1/1:5,0:5:7.16:41,7,0	0/1:3,10:13:8.49:71,0,8	1/1:6,15:21:32.64:268,33,0	0/1:8,2:21:24.25:79,0,24	1/1:9,1:10:5.98:49,6,0
chr10	19804644	.	A	AAAC	588.80	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-2.935;DP=369;FS=3.342;HRun=0;HaplotypeScore=68.1292;InbreedingCoeff=0.6750;MQ=65.65;MQ0=5;MQRankSum=0.084;QD=17.84;ReadPosRankSum=0.256;VQSLOD=2.9195;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:16:16.84:0,17,106	0/0:6,0:6:17.60:0,18,121	0/0:23,0:3:5.87:0,6,40	0/0:21,0:13:11.11:0,11,144	0/0:19,0:19:32.68:0,33,223	0/0:14,0:14:17.75:0,18,124	0/0:9,0:9:20.48:0,20,135	1/1:9,17:28:27.05:679,27,0	0/0:12,0:12:3.41:0,3,18	0/0:13,0:13:32.51:0,33,285	0/0:11,0:11:29.86:0,30,239	0/0:7,0:6:14.98:0,15,141	0/0:8,0:8:23.11:0,23,167	0/0:12,0:12:26.91:0,27,229	0/0:12,0:12:8.95:0,9,71	0/0:18,0:18:44.83:0,45,359	0/0:14,0:14:35.04:0,35,279	0/0:18,0:18:43.41:0,43,339	0/0:12,0:10:28.18:0,28,220	0/0:11,0:11:30.26:0,30,226	0/0:4,0:4:9:0,9,80	0/0:6,0:6:17.98:0,18,154	0/0:4,0:4:10.16:0,10,67	1/1:5,0:5:2.74:14,3,0	0/0:13,0:13:17.73:0,18,142	0/0:21,0:21:49.81:0,50,328	0/0:21,0:21:23.42:0,23,195	0/0:10,0:10:19.30:0,19,151
chr10	19804918	.	ATAG	A	848.46	PASS	AB=1.000;AC=17;AF=0.386;AN=44;BaseQRankSum=8.008;DP=143;FS=3.617;HRun=0;HaplotypeScore=28.1540;InbreedingCoeff=0.7015;MQ=56.37;MQ0=3;MQRankSum=-0.660;QD=20.20;ReadPosRankSum=2.105;VQSLOD=2.7708;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:24.05:0,24,426	0/0:1,0:1:3.01:0,3,68	0/0:5,0:2:6.01:0,6,64	./.	0/0:5,0:5:15.03:0,15,279	0/0:11,0:11:32.91:0,33,502	0/0:3,0:3:9.02:0,9,158	0/0:29,0:29:87.16:0,87,1331	0/0:5,0:5:15.02:0,15,253	1/1:1,1:2:6.01:64,6,0	./.	1/1:3,0:3:5.96:45,6,0	1/1:5,0:5:14.98:124,15,0	1/1:1,0:1:3:26,3,0	0/0:2,0:2:6.02:0,6,119	0/1:6,0:6:13.99:94,0,14	1/1:12,2:14:39.97:303,40,0	1/1:0,5:5:9.03:144,9,0	1/1:2,2:4:12.03:155,12,0	./.	./.	./.	1/1:2,0:2:6.01:58,6,0	./.	0/0:8,0:8:21.04:0,21,394	0/0:5,0:5:15.03:0,15,260	0/0:11,0:11:29.97:0,30,354	0/0:5,0:4:12.02:0,12,229
chr10	19804930	.	ATAG	A	923.30	PASS	AB=1.000;AC=20;AF=0.435;AN=46;BaseQRankSum=8.237;DP=145;FS=8.790;HRun=0;HaplotypeScore=28.1036;InbreedingCoeff=0.6559;MQ=58.09;MQ0=2;MQRankSum=-0.166;QD=20.07;ReadPosRankSum=1.207;VQSLOD=1.7566;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:23.69:0,24,465	0/0:1,0:1:3:0,3,25	./.	0/1:2,0:3:3.31:3,0,20	0/0:5,0:5:15.02:0,15,254	0/0:12,0:12:35.95:0,36,478	0/0:4,0:4:12.01:0,12,186	0/0:28,0:28:84.18:0,84,1340	0/0:3,0:3:9:0,9,118	1/1:2,0:2:6.01:64,6,0	./.	1/1:2,0:2:5.96:45,6,0	1/1:7,0:7:20.97:175,21,0	1/1:2,0:2:6:51,6,0	0/0:2,0:2:6.02:0,6,138	0/1:4,0:4:16.98:72,0,17	1/1:11,2:13:38.70:295,39,0	1/1:5,0:5:9.03:143,9,0	1/1:4,2:6:16.85:187,17,0	1/1:1,0:1:3:27,3,0	./.	./.	1/1:1,0:1:3.01:31,3,0	./.	0/0:8,0:8:24.03:0,24,376	0/0:6,0:6:18.05:0,18,323	0/0:7,0:7:20.93:0,21,292	0/0:8,0:7:21.04:0,21,308
chr10	19806237	.	T	TA	3899.24	PASS	AB=0.744;AC=30;AF=0.536;AN=56;BaseQRankSum=-4.817;DP=501;FS=0.396;HRun=12;HaplotypeScore=57.7321;InbreedingCoeff=0.7685;MQ=75.96;MQ0=1;MQRankSum=-0.258;QD=12.78;ReadPosRankSum=-1.293;VQSLOD=3.1211;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:38.67:0,39,284	0/0:10,0:10:22.06:0,22,152	0/1:17,0:16:2.88:3,0,81	0/0:17,0:16:23.63:0,24,164	0/0:28,0:28:65.51:0,66,479	0/0:20,1:24:23.39:0,23,286	0/0:11,0:11:26.78:0,27,192	1/1:14,1:31:30.07:242,30,0	0/0:19,0:21:48.07:0,48,317	1/1:5,14:19:14.13:293,14,0	1/1:1,8:12:29.51:236,30,0	1/1:1,16:17:8.15:241,8,0	1/1:4,16:21:29.88:277,30,0	1/1:1,11:13:11.60:84,12,0	0/0:18,0:19:31.76:0,32,225	1/1:3,10:13:15.81:249,16,0	1/1:6,24:30:39.53:379,40,0	0/1:2,11:13:0.87:154,0,1	1/1:5,13:19:40.54:366,41,0	1/1:12,17:31:48.25:604,48,0	1/1:6,2:8:9.49:70,9,0	0/1:3,15:18:1.78:247,0,2	1/1:4,10:14:30.92:289,31,0	1/1:0,5:5:15.02:146,15,0	0/1:21,3:24:19.51:20,0,273	0/0:27,0:27:39.75:0,40,409	0/0:13,0:13:32.79:0,33,240	0/0:7,0:7:20.86:0,21,151
chr10	19806401	.	TA	T	9357.46	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=15.807;DP=708;FS=4.173;HRun=7;HaplotypeScore=70.3804;InbreedingCoeff=0.9923;MQ=85.06;MQ0=0;MQRankSum=-2.340;QD=26.97;ReadPosRankSum=3.360;VQSLOD=5.7341;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,117,1465	0/0:14,0:14:42.13:0,42,528	0/0:25,1:26:39.15:0,39,599	0/0:22,0:20:42.78:0,43,573	0/0:32,0:32:93.27:0,93,1144	0/0:27,0:27:72.23:0,72,906	0/0:19,0:19:54.16:0,54,665	0/0:36,0:36:99:0,108,1304	0/0:30,0:30:87.28:0,87,1089	1/1:5,35:40:99:1099,108,0	1/1:4,18:22:57.05:558,57,0	1/1:1,23:24:66.15:673,66,0	1/1:2,22:24:66.15:673,66,0	1/1:3,14:17:36.08:367,36,0	0/0:24,0:23:63.20:0,63,792	1/1:1,16:17:13.37:452,13,0	1/1:1,20:21:51.12:520,51,0	1/1:1,8:9:24.05:245,24,0	1/1:2,22:24:66.13:666,66,0	1/1:1,30:31:90.08:891,90,0	1/1:4,28:32:81.18:826,81,0	1/1:1,27:28:81.18:826,81,0	1/1:1,30:31:84.19:857,84,0	1/1:1,26:27:69.16:704,69,0	0/0:26,0:26:78.22:0,78,950	0/0:34,0:34:87.21:0,87,1075	0/0:23,0:23:66.20:0,66,818	0/0:5,0:5:12.04:0,12,151
chr10	19806896	.	TG	T	11105.40	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=15.407;DP=642;FS=3.383;HRun=3;HaplotypeScore=64.3019;InbreedingCoeff=0.9989;MQ=88.58;MQ0=0;MQRankSum=-4.016;QD=34.49;ReadPosRankSum=2.753;VQSLOD=5.6231;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:75.25:0,75,1078	0/0:17,0:17:51.13:0,51,696	0/0:27,0:27:72.22:0,72,1002	0/0:21,0:21:44.52:0,45,644	0/0:29,0:29:87.29:0,87,1252	0/0:27,0:27:78.25:0,78,1105	0/0:19,0:19:48.15:0,48,675	0/0:24,0:24:72.24:0,72,1037	0/0:12,0:12:30.10:0,30,432	1/1:1,26:27:78.24:966,78,0	1/1:1,29:30:87.27:1079,87,0	1/1:0,23:23:66.21:818,66,0	1/1:1,28:29:81.25:1004,81,0	1/1:1,24:25:69.22:855,69,0	0/0:25,0:25:75.25:0,75,1080	1/1:4,21:25:22.99:725,23,0	1/1:1,20:21:63.18:768,63,0	1/1:0,9:9:27.08:335,27,0	1/1:1,12:13:36.11:446,36,0	1/1:3,26:29:75.22:917,75,0	1/1:0,20:20:60.15:727,60,0	1/1:3,28:31:90.25:1090,90,0	1/1:2,23:25:65.80:817,66,0	1/1:0,15:15:45.14:558,45,0	0/0:23,0:23:69.23:0,69,991	0/0:27,1:28:38.04:0,38,1000	0/0:34,0:34:96.29:0,96,1342	0/0:8,0:8:21.54:0,22,304
chr10	19806982	.	CA	C	7929.13	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=15.176;DP=621;FS=0.000;HRun=8;HaplotypeScore=66.4101;InbreedingCoeff=0.9969;MQ=75.80;MQ0=0;MQRankSum=-1.666;QD=25.74;ReadPosRankSum=2.955;VQSLOD=5.5673;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:60.17:0,60,858	0/0:14,0:14:36.11:0,36,435	0/0:26,0:24:57.12:0,57,649	0/0:15,0:14:30.97:0,31,357	0/0:29,0:29:87.27:0,87,1051	0/0:24,0:24:66.20:0,66,797	0/0:17,0:17:45.14:0,45,543	0/0:31,0:31:78.24:0,78,942	0/0:15,1:16:19.17:0,19,515	1/1:4,15:19:50.85:484,51,0	1/1:8,20:28:69.10:666,69,0	1/1:7,12:19:42.05:400,42,0	1/1:4,21:25:72.12:695,72,0	1/1:2,22:24:69.09:659,69,0	0/0:20,0:20:60.17:0,60,714	1/1:4,15:19:51.07:487,51,0	1/1:2,23:25:72.11:695,72,0	1/1:1,19:20:60.09:578,60,0	1/1:3,20:23:60.09:580,60,0	1/1:8,21:29:69.10:666,69,0	1/1:0,22:22:54.09:521,54,0	1/1:1,23:24:72.11:693,72,0	1/1:3,20:23:63.08:602,63,0	1/1:2,6:8:21.03:203,21,0	0/0:28,0:28:84.25:0,84,1000	0/0:25,2:27:17.26:0,17,760	0/0:30,0:29:78.23:0,78,930	0/0:8,0:8:24.07:0,24,290
chr10	19807694	.	A	AAT	7723.49	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-13.036;DP=494;FS=0.756;HRun=0;HaplotypeScore=55.8023;InbreedingCoeff=0.9697;MQ=74.44;MQ0=2;MQRankSum=0.370;QD=35.92;ReadPosRankSum=1.614;VQSLOD=6.7169;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:87.24:0,87,1193	0/0:5,0:5:15.05:0,15,217	0/0:15,0:13:20.64:0,21,275	0/0:13,0:10:15.14:0,15,118	0/0:34,0:34:95.80:0,96,1204	0/0:20,0:20:60.19:0,60,845	0/0:10,0:10:30.07:0,30,411	0/0:26,0:26:75.23:0,75,1028	0/0:12,0:12:36.12:0,36,519	1/1:0,15:16:45.08:663,45,0	1/1:1,12:13:33.02:515,33,0	1/1:0,15:16:36.12:622,36,0	1/1:0,12:12:24.08:410,24,0	1/1:0,17:18:30.10:518,30,0	0/0:20,0:20:60.17:0,60,801	1/1:0,11:14:18.06:302,18,0	1/1:1,29:28:51.17:879,51,0	1/1:0,31:30:90.31:1542,90,0	1/1:0,11:13:39.03:527,39,0	1/1:1,21:23:60.18:995,60,0	1/1:0,5:6:6.02:103,6,0	1/1:0,5:5:12.03:150,12,0	1/1:2,8:11:18.05:292,18,0	1/1:0,6:7:12.04:207,12,0	0/0:25,0:25:75.15:0,75,1027	0/0:23,0:23:69.21:0,69,949	0/0:27,0:27:78.23:0,78,1085	0/0:19,0:19:54.15:0,54,742
chr10	19807960	.	A	AT	8776.29	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-1.986;DP=665;FS=5.654;HRun=8;HaplotypeScore=70.5806;InbreedingCoeff=0.9970;MQ=77.30;MQ0=0;MQRankSum=-2.593;QD=28.13;ReadPosRankSum=1.423;VQSLOD=5.3259;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,147,1326	0/0:5,0:5:15.01:0,15,137	0/0:12,0:13:26.02:0,26,221	0/0:14,0:14:29.67:0,30,231	0/0:18,0:19:56.05:0,56,495	0/0:29,0:29:66.02:0,66,604	0/0:23,0:23:63.01:0,63,572	0/0:46,0:46:99:0,105,948	0/0:19,0:19:48.02:0,48,439	1/1:3,23:26:68.99:772,69,0	1/1:1,19:20:51.11:574,51,0	1/1:4,25:29:69.21:796,69,0	1/1:4,19:23:48.14:554,48,0	1/1:6,20:27:63.02:706,63,0	0/0:32,0:32:75.03:0,75,686	1/1:0,23:23:59.39:665,59,0	1/1:4,35:39:74.84:1115,75,0	1/1:0,12:12:36.11:415,36,0	1/1:3,19:22:57.11:624,57,0	1/1:1,15:16:45.09:504,45,0	1/1:4,16:20:45.13:519,45,0	1/1:1,10:11:24.07:277,24,0	1/1:1,19:20:29.70:596,30,0	1/1:2,22:24:57.17:658,57,0	0/0:23,0:23:63.03:0,63,577	0/0:24,1:25:66.03:0,66,604	0/0:43,0:43:99:0,120,1088	0/0:12,0:12:27:0,27,247
chr10	19808587	.	C	CTT	9218.62	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-12.455;DP=588;FS=0.686;HRun=9;HaplotypeScore=68.7914;InbreedingCoeff=0.9950;MQ=81.10;MQ0=2;MQRankSum=-2.988;QD=33.16;ReadPosRankSum=-0.432;VQSLOD=4.8263;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:30:86.93:0,87,896	0/0:6,0:6:15.04:0,15,160	0/0:19,0:19:34.04:0,34,320	0/0:17,0:17:34.32:0,34,325	0/0:21,0:21:60.13:0,60,631	0/0:25,0:25:66.12:0,66,692	0/0:17,0:17:45.11:0,45,479	0/0:27,0:27:60.07:0,60,623	0/0:21,0:21:54.10:0,54,575	1/1:4,18:22:19.25:707,19,0	1/1:2,15:19:50.61:704,51,0	1/1:2,14:18:45.15:665,45,0	1/1:3,11:16:32.08:433,32,0	1/1:4,20:23:54.14:797,54,0	0/0:27,0:28:71.89:0,72,746	1/1:3,20:25:62.69:915,63,0	1/1:3,20:24:53.67:794,54,0	1/1:4,15:19:33.11:508,33,0	1/1:5,15:20:42.14:640,42,0	1/1:2,20:23:62.31:843,62,0	1/1:0,13:13:36.12:554,36,0	1/1:2,20:22:22.21:726,22,0	1/1:3,19:23:45.58:657,46,0	1/1:1,8:9:18.06:276,18,0	0/0:27,0:27:66.08:0,66,693	0/0:27,1:28:29.15:0,29,720	0/0:34,0:34:90.20:0,90,949	0/0:10,0:10:25.90:0,26,285
chr10	19810224	.	AACACAC	A	626.29	PASS	AB=0.932;AC=16;AF=0.333;AN=48;BaseQRankSum=2.158;DP=556;FS=2.384;HRun=0;HaplotypeScore=118.1221;InbreedingCoeff=0.5850;MQ=69.21;MQ0=9;MQRankSum=-3.351;QD=4.20;ReadPosRankSum=1.919;VQSLOD=2.3964;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:32:12.04:0,12,334	0/0:5,0:5:9.03:0,9,244	./.	./.	0/0:20,0:20:8.97:0,9,234	0/0:24,0:23:33.11:0,33,948	0/0:29,0:34:15.52:0,16,423	0/0:27,0:27:0.89:0,1,2	0/0:12,0:12:18.06:0,18,453	1/1:17,3:19:7.26:123,7,0	1/1:8,0:8:5.99:50,6,0	1/1:13,5:18:3.01:60,3,0	0/0:13,0:17:12.04:0,12,221	1/1:11,3:14:3.01:60,3,0	0/0:27,0:26:30.10:0,30,786	1/1:13,3:16:12.04:222,12,0	1/1:15,0:16:3.01:42,3,0	0/1:13,0:13:14.63:16,0,15	./.	0/0:21,0:21:0.47:0,0,1	0/0:22,0:22:0:0,0,0	./.	0/1:16,3:19:0:0,0,0	1/1:15,9:25:12.04:202,12,0	0/0:15,0:21:3.01:0,3,78	0/0:29,0:25:30.57:0,31,802	0/0:20,0:20:17.83:0,18,340	0/0:2,0:2:5.98:0,6,68
chr10	19811831	.	GA	G	10508.31	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=13.964;DP=764;FS=13.402;HRun=4;HaplotypeScore=81.0832;InbreedingCoeff=0.9991;MQ=72.76;MQ0=5;MQRankSum=-0.078;QD=29.60;ReadPosRankSum=5.500;VQSLOD=3.6857;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,129,1801	0/0:13,0:13:33.11:0,33,460	0/0:54,1:30:44.15:0,44,681	0/0:41,0:30:26.89:0,27,555	0/0:35,0:35:96.30:0,96,1308	0/0:21,0:21:59.23:0,59,802	0/0:26,0:26:75.19:0,75,995	0/0:36,0:36:96.30:0,96,1313	0/0:23,0:23:63.21:0,63,872	1/1:1,22:23:69.21:821,69,0	1/1:2,17:19:48.14:568,48,0	1/1:2,22:24:54.16:648,54,0	1/1:0,30:30:75.23:899,75,0	1/1:1,25:26:57.17:684,57,0	0/0:25,0:25:75.25:0,75,1047	1/1:2,18:20:21.06:252,21,0	1/1:1,30:31:81.25:972,81,0	1/1:4,23:27:54.17:647,54,0	1/1:2,26:28:68.23:863,68,0	1/1:1,32:33:93.28:1108,93,0	1/1:0,17:17:45.14:540,45,0	1/1:0,24:24:66.20:785,66,0	1/1:0,17:17:48.14:570,48,0	1/1:0,36:36:96.29:1152,96,0	0/0:29,0:29:81.25:0,81,1100	0/0:21,0:21:27.25:0,27,778	0/0:26,0:26:78.26:0,78,1088	0/0:10,0:10:29.99:0,30,373
chr10	19812466	.	C	CGAAA	15785.82	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=10.119;DP=655;FS=3.375;HRun=0;HaplotypeScore=108.6837;InbreedingCoeff=0.9969;MQ=74.47;MQ0=0;MQRankSum=-3.041;QD=48.72;ReadPosRankSum=0.338;VQSLOD=5.7468;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:49.14:0,49,1220	0/0:9,0:9:18.06:0,18,302	0/0:19,0:19:32.46:0,32,406	0/0:19,0:18:20.96:0,21,292	0/0:24,0:24:60.21:0,60,1007	0/0:30,0:30:84.26:0,84,1358	0/0:17,0:17:42.10:0,42,614	0/0:28,0:28:60.15:0,60,865	0/0:32,0:32:87.21:0,87,1375	1/1:11,13:24:69.16:1506,69,0	1/1:4,20:25:60.05:1321,60,0	1/1:8,13:21:36.12:858,36,0	1/1:8,15:25:42.14:1026,42,0	1/1:6,20:26:66.14:1493,66,0	0/0:33,0:33:69.24:0,69,1158	1/1:1,22:23:51.18:1265,51,0	1/1:9,20:31:50.38:1197,50,0	1/1:9,10:19:42.08:888,42,0	1/1:3,17:20:51.03:1004,51,0	1/1:4,15:19:36.12:857,36,0	1/1:7,14:21:39.13:966,39,0	1/1:0,16:17:39.09:911,39,0	1/1:7,19:29:54.19:1339,54,0	1/1:3,21:23:48.16:1155,48,0	0/0:19,0:19:45.11:0,45,722	0/0:38,1:39:25.06:0,25,1514	0/0:25,0:25:51.14:0,51,804	0/0:6,0:6:18.06:0,18,294
chr10	19812577	.	GAAA	G	6890.57	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=14.097;DP=512;FS=3.163;HRun=12;HaplotypeScore=100.9934;InbreedingCoeff=0.9871;MQ=71.87;MQ0=2;MQRankSum=-2.524;QD=28.59;ReadPosRankSum=4.709;VQSLOD=4.3622;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:26:66.16:0,66,1206	0/0:6,0:6:18.06:0,18,355	0/0:18,0:14:18.53:0,19,299	0/0:11,0:10:17.79:0,18,230	0/0:21,0:24:57.16:0,57,999	0/0:25,0:26:78.18:0,78,1381	0/0:9,0:9:21.07:0,21,414	0/0:22,0:25:54.11:0,54,835	0/0:16,0:18:48.16:0,48,924	1/1:4,22:26:63.17:796,63,0	1/1:2,28:30:66.58:835,67,0	1/1:2,11:13:30.07:379,30,0	1/1:3,16:19:45.11:568,45,0	1/1:0,14:14:42.13:531,42,0	0/0:23,0:25:69.21:0,69,1283	1/1:3,14:17:39.10:493,39,0	1/1:1,17:18:45.14:569,45,0	1/1:3,20:24:54.10:662,54,0	1/1:4,8:12:19.55:231,20,0	1/1:3,14:17:42.08:512,42,0	1/1:1,12:13:24.07:303,24,0	1/1:2,11:13:24.01:303,24,0	1/1:0,14:14:38.71:492,39,0	1/1:3,8:11:9.98:217,10,0	0/0:19,0:20:48.14:0,48,891	0/0:26,0:29:69.23:0,69,1299	0/0:26,0:28:66.23:0,66,1284	0/0:6,0:6:18.04:0,18,318
chr10	19812836	.	CA	C	683.94	PASS	AB=0.819;AC=30;AF=0.536;AN=56;BaseQRankSum=10.600;DP=438;FS=6.120;HRun=14;HaplotypeScore=87.0153;InbreedingCoeff=0.6848;MQ=68.41;MQ0=4;MQRankSum=-8.487;QD=2.81;ReadPosRankSum=3.735;VQSLOD=0.0687;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:18:34.89:0,35,346	0/0:6,0:6:14.50:0,14,116	0/0:34,0:15:1.03:0,1,64	0/0:17,0:9:15.78:0,16,98	0/0:19,0:18:41.56:0,42,347	0/0:13,1:19:8.86:0,9,285	0/1:5,1:6:5.65:6,0,84	0/1:11,16:29:0.40:240,0,0	0/1:10,0:12:3.29:3,0,144	1/1:22,0:22:26.10:74,26,0	1/1:17,0:19:20.12:58,20,0	1/1:6,0:6:8.59:26,9,0	1/1:12,0:12:14.65:44,15,0	1/1:16,0:16:20.36:58,20,0	0/0:14,0:14:32.92:0,33,284	1/1:12,0:12:18.32:52,18,0	1/1:9,0:9:8.69:28,9,0	1/1:13,0:13:11.99:35,12,0	1/1:18,0:20:24.40:70,24,0	1/1:20,0:22:32.87:97,33,0	1/1:6,0:6:2.02:6,2,0	1/1:11,0:11:9.94:28,10,0	1/1:10,0:11:18.80:53,19,0	0/0:4,0:4:0:0,0,0	0/0:22,0:22:44.82:0,45,387	0/1:16,1:17:1.74:2,0,204	0/0:23,0:25:17.73:0,18,331	0/0:16,1:17:17.91:0,18,269
chr10	19812845	.	AAAAAAC	A	7489.08	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=8.025;DP=444;FS=29.957;HRun=0;HaplotypeScore=101.1274;InbreedingCoeff=0.9065;MQ=66.89;MQ0=4;MQRankSum=-11.434;QD=41.38;ReadPosRankSum=6.883;VQSLOD=2.6889;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:54.13:0,54,1623	0/0:6,0:6:18.05:0,18,471	0/0:32,0:12:25.31:0,25,432	0/0:21,0:12:33.63:0,34,427	0/0:20,0:20:60.14:0,60,1542	0/0:21,0:21:55.40:0,55,1453	0/0:7,0:7:21.07:0,21,617	0/0:35,0:35:99:0,102,2006	0/0:11,0:11:30.06:0,30,859	1/1:2,19:21:52.14:969,52,0	1/1:5,17:22:37.04:774,37,0	1/1:2,4:6:14.89:277,15,0	1/1:0,11:11:23.84:497,24,0	1/1:0,15:15:29.70:660,30,0	0/0:13,0:13:39.12:0,39,1175	1/1:0,11:11:27.09:594,27,0	1/1:0,10:10:12.04:263,12,0	1/1:2,11:13:20.88:354,21,0	1/1:3,17:20:56.13:967,56,0	1/1:4,18:22:37.80:1105,38,0	1/1:0,7:7:2.96:66,3,0	1/1:1,8:9:14.99:310,15,0	1/1:2,9:11:22.24:622,22,0	1/1:3,0:3:0.44:32,0,0	0/0:18,0:18:51.17:0,51,1570	0/0:19,1:20:3.11:0,3,1290	0/0:23,0:23:66.22:0,66,1812	0/0:17,0:17:44.43:0,44,1225
chr10	19815069	.	ACT	A	2340.18	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=7.575;DP=420;FS=1.249;HRun=0;HaplotypeScore=76.5013;InbreedingCoeff=0.7270;MQ=65.70;MQ0=17;MQRankSum=-0.892;QD=11.31;ReadPosRankSum=1.408;VQSLOD=3.4923;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:19:18.03:0,18,129	0/0:8,0:8:14.92:0,15,155	0/0:24,0:11:33.02:0,33,366	0/0:29,0:17:40.96:0,41,402	0/0:21,0:21:41.91:0,42,354	0/0:10,0:9:10.29:0,10,115	0/0:24,0:24:37.71:0,38,365	0/0:22,0:21:52.80:0,53,470	0/0:14,0:14:24.85:0,25,272	1/1:16,0:15:34.64:283,35,0	1/1:11,0:11:20.79:159,21,0	1/1:12,0:12:27:254,27,0	1/1:9,0:9:14.83:116,15,0	1/1:14,0:13:23.11:236,23,0	0/0:21,0:21:15.58:0,16,250	0/1:14,0:14:49.86:50,0,58	1/1:14,1:15:1.65:152,2,0	1/1:8,1:8:20.73:158,21,0	1/1:15,0:15:16.14:214,16,0	1/1:10,6:16:20.93:167,21,0	1/1:19,0:18:10.88:209,11,0	1/1:12,0:11:24.34:231,24,0	1/1:11,0:11:30.85:262,31,0	1/1:22,0:22:5.94:45,6,0	0/0:8,0:8:4.49:0,4,120	0/0:11,0:11:22.21:0,22,211	0/1:7,0:6:12.78:13,0,37	0/1:5,0:5:2.97:3,0,53
chr10	19815070	.	CTCTG	C	2555.23	PASS	AB=1.000;AC=24;AF=0.429;AN=56;BaseQRankSum=4.459;DP=428;FS=2.002;HRun=0;HaplotypeScore=89.6971;InbreedingCoeff=0.6760;MQ=64.97;MQ0=20;MQRankSum=0.844;QD=12.78;ReadPosRankSum=1.698;VQSLOD=3.1810;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:20:18.85:0,19,153	0/0:8,0:8:2.46:0,2,179	0/0:24,0:11:33.02:0,33,366	0/0:29,0:17:40.96:0,41,402	0/0:21,0:21:41.76:0,42,342	0/0:10,0:9:17.96:0,18,145	0/0:25,0:24:57.58:0,58,445	0/0:22,0:21:53.72:0,54,485	0/0:14,0:14:32.98:0,33,354	1/1:2,14:15:33.81:378,34,0	1/1:10,0:10:20.02:188,20,0	1/1:12,0:12:27.01:309,27,0	1/1:9,0:9:12.98:94,13,0	1/1:13,1:13:32.24:370,32,0	0/0:21,0:21:14.47:0,14,327	0/1:13,0:14:51.11:51,0,123	0/1:16,0:16:24.02:101,0,24	0/1:11,0:11:6.53:80,0,7	0/1:15,0:15:2.36:194,0,2	1/1:15,0:15:20.93:167,21,0	1/1:20,0:18:4.68:203,5,0	1/1:11,0:10:29.19:263,29,0	1/1:11,0:11:32.19:288,32,0	1/1:5,20:25:5.61:77,6,0	0/0:8,0:8:20.91:0,21,188	0/0:11,0:11:32.95:0,33,298	0/0:7,0:6:19.21:0,19,152	0/0:5,0:5:14.96:0,15,140
chr10	19815072	.	CTG	C	777.43	PASS	AB=0.928;AC=26;AF=0.520;AN=50;BaseQRankSum=0.968;DP=470;FS=8.728;HRun=0;HaplotypeScore=92.4727;InbreedingCoeff=-0.0640;MQ=60.65;MQ0=30;MQRankSum=2.460;QD=2.72;ReadPosRankSum=1.764;VQSLOD=1.3687;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:21:5.83:37,6,0	0/1:9,0:8:8.71:53,0,9	./.	./.	0/0:21,0:20:2.97:0,3,20	1/1:13,0:11:3.89:34,4,0	1/1:27,0:25:11.95:107,12,0	0/0:28,0:27:8.48:0,8,33	0/1:10,4:14:26.31:26,0,39	0/1:18,0:15:12.10:33,0,12	0/1:10,0:10:0.19:0,0,27	0/1:16,0:16:19.18:43,0,19	0/0:12,0:10:0:0,0,0	0/1:15,0:14:39.64:71,0,40	0/1:9,9:21:52.11:87,0,52	0/0:18,0:18:17.99:0,18,215	0/1:20,0:20:11.64:12,0,59	1/1:13,0:12:5.10:29,5,0	0/0:18,0:17:14.88:0,15,128	./.	0/0:22,0:19:3.01:0,3,44	0/1:11,0:10:13.61:21,0,14	0/1:12,0:11:13.03:21,0,13	1/1:28,0:28:2.60:15,3,0	0/1:5,2:8:13.09:66,0,13	0/1:14,0:14:2.91:64,0,3	1/1:6,1:6:14.90:134,15,0	1/1:4,2:5:8.21:71,8,0
chr10	19815114	.	G	GTC	959.18	PASS	AB=0.848;AC=13;AF=0.250;AN=52;BaseQRankSum=7.078;DP=482;FS=2.056;HRun=0;HaplotypeScore=103.9023;InbreedingCoeff=0.2650;MQ=44.20;MQ0=41;MQRankSum=-2.549;QD=4.82;ReadPosRankSum=0.190;VQSLOD=3.0509;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:21:25.15:0,25,190	0/0:5,0:4:11.23:0,11,82	./.	./.	0/0:14,0:13:3.97:0,4,82	0/0:17,0:16:29.90:0,30,235	0/0:34,0:29:42.46:0,42,399	0/0:30,0:27:66.12:0,66,404	0/0:14,0:13:26.80:0,27,232	1/1:28,0:22:4.38:282,4,0	0/1:4,7:12:35.15:37,0,35	0/1:17,2:19:1.54:100,0,2	0/0:12,0:10:4.12:0,4,25	0/1:19,3:20:3.53:220,0,4	0/0:24,0:23:34.95:0,35,272	0/1:21,0:21:30.89:31,0,213	0/0:25,0:24:21.30:0,21,179	0/1:13,0:12:35.56:60,0,36	0/1:25,0:22:71.13:230,0,71	0/0:14,0:13:0.04:0,0,1	0/0:21,0:16:2.80:0,3,42	1/1:5,10:14:5.05:48,5,0	0/1:3,13:14:0.32:34,0,0	1/1:27,1:28:6.01:63,6,0	0/0:9,0:9:9.44:0,9,116	0/0:18,0:13:36.91:0,37,269	0/0:14,0:13:37.05:0,37,278	0/0:8,0:5:11.13:0,11,90
chr10	19815118	.	GTC	G	985.31	PASS	AB=0.998;AC=25;AF=0.463;AN=54;BaseQRankSum=7.241;DP=496;FS=11.673;HRun=0;HaplotypeScore=96.7891;InbreedingCoeff=-0.3464;MQ=44.23;MQ0=39;MQRankSum=-2.209;QD=2.40;ReadPosRankSum=-1.853;VQSLOD=1.0574;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:23:4.18:4,0,201	1/1:4,0:4:2.03:37,2,0	./.	0/0:5,0:2:6.01:0,6,57	0/0:6,7:12:8.98:0,9,73	0/1:17,0:16:12.53:13,0,188	0/1:36,0:32:8.48:8,0,345	0/0:27,0:24:20.27:0,20,313	0/0:15,0:14:13.04:0,13,205	0/1:29,0:23:83.32:109,0,83	0/1:13,0:13:10.79:19,0,11	0/1:18,0:18:5.40:40,0,5	0/0:10,0:8:2.94:0,3,18	0/1:22,0:20:33.14:110,0,33	0/1:25,1:25:19.27:19,0,213	0/1:23,0:23:99:186,0,159	0/1:25,0:24:4.37:87,0,4	0/1:12,0:11:49.86:85,0,50	0/1:28,0:25:99:110,0,177	1/1:16,0:15:5.41:38,5,0	0/1:23,0:18:18.94:19,0,31	0/0:15,0:14:0.20:0,0,40	1/1:16,0:14:1.25:4,1,0	1/1:30,0:30:4.35:70,4,0	0/1:9,0:9:27.95:28,0,34	0/1:17,0:12:11.51:12,0,182	0/1:14,0:13:65.44:65,0,176	0/1:8,0:5:5.35:69,0,5
chr10	19815120	.	C	CTGTTTG	1998.13	PASS	AB=0.928;AC=12;AF=0.222;AN=54;BaseQRankSum=3.789;DP=515;FS=0.597;HRun=0;HaplotypeScore=128.9507;InbreedingCoeff=-0.1646;MQ=44.43;MQ0=39;MQRankSum=-5.027;QD=8.06;ReadPosRankSum=-4.517;VQSLOD=0.7589;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:22:32.15:0,32,596	0/0:4,0:4:4.67:0,5,60	./.	0/0:7,0:4:9:0,9,104	0/0:12,0:11:9.03:0,9,207	0/0:18,0:17:33.06:0,33,641	0/0:39,0:35:55.01:0,55,1220	0/0:28,0:25:59.59:0,60,830	0/0:15,0:14:26.52:0,27,564	0/1:27,0:21:99:317,0,206	0/1:12,0:12:19.25:19,0,21	0/1:10,9:20:76.08:107,0,76	0/0:2,6:11:2.68:0,3,33	0/1:25,0:23:99:293,0,157	0/0:27,0:26:48.12:0,48,825	0/1:23,0:23:99:514,0,171	0/1:11,12:29:16.34:16,0,114	0/1:12,0:11:99:102,0,122	0/1:27,0:24:99:482,0,140	1/1:14,0:13:6.96:85,7,0	0/1:26,0:21:19.61:46,0,20	0/0:17,0:16:6.02:0,6,80	0/0:15,0:13:3.01:0,3,42	0/1:32,0:32:26.70:163,0,27	0/0:8,0:8:11.05:0,11,272	0/0:16,0:11:9.26:0,9,504	0/0:15,0:14:32.60:0,33,680	0/0:8,0:5:8.13:0,8,151
chr10	19815696	.	C	CCGT	17006.48	PASS	AB=0.950;AC=30;AF=0.536;AN=56;BaseQRankSum=-15.982;DP=675;FS=5.623;HRun=0;HaplotypeScore=92.8401;InbreedingCoeff=0.8896;MQ=85.82;MQ0=0;MQRankSum=-3.993;QD=45.11;ReadPosRankSum=4.839;VQSLOD=6.8094;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,144,2323	0/0:12,0:12:36.12:0,36,588	0/0:20,0:20:51.17:0,51,803	0/0:26,0:26:40.60:0,41,886	0/0:16,0:16:45.14:0,45,710	0/0:23,0:23:60.19:0,60,949	0/0:40,0:40:99:0,114,1849	0/0:26,0:25:69.23:0,69,1095	0/1:14,1:15:21.87:22,0,592	1/1:2,19:22:57.20:1219,57,0	1/1:0,11:12:30.10:668,30,0	1/1:4,21:25:51.18:1137,51,0	1/1:4,15:21:39.13:870,39,0	1/1:4,21:29:66.23:1426,66,0	0/0:21,0:21:54.18:0,54,882	1/1:3,24:28:66.23:1474,66,0	1/1:1,21:23:57.20:1271,57,0	1/1:3,21:24:63.22:1406,63,0	1/1:8,17:25:60.21:1307,60,0	1/1:4,18:22:45.15:1000,45,0	1/1:5,37:42:87.30:1928,87,0	1/1:5,16:22:36.12:802,36,0	1/1:0,17:17:48.16:1070,48,0	1/1:0,23:24:63.22:1407,63,0	0/0:32,0:32:96.32:0,96,1542	0/1:25,1:26:0.79:1,0,954	0/0:21,0:21:60.20:0,60,969	0/0:11,0:11:33.11:0,33,539
chr10	19816641	.	GAC	G	8084.84	PASS	AB=0.790;AC=29;AF=0.518;AN=56;BaseQRankSum=14.594;DP=802;FS=0.991;HRun=0;HaplotypeScore=108.2467;InbreedingCoeff=0.5638;MQ=69.19;MQ0=7;MQRankSum=-0.073;QD=16.70;ReadPosRankSum=4.837;VQSLOD=4.4862;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:59,2:61:57.38:0,57,1743	0/0:21,0:21:54.18:0,54,860	0/0:47,1:34:21.64:0,22,747	0/0:34,0:26:39.86:0,40,540	0/0:34,1:35:42.25:0,42,1107	0/0:24,0:24:57.18:0,57,887	0/1:20,4:24:26.78:27,0,579	0/1:38,3:42:25.29:25,0,906	0/0:35,0:35:96.33:0,96,1511	1/1:4,12:16:33.09:385,33,0	1/1:4,19:22:33.04:396,33,0	1/1:7,25:32:63.19:755,63,0	1/1:9,25:34:60.18:719,60,0	1/1:3,19:25:62.69:689,63,0	0/0:26,1:27:36.24:0,36,1019	0/1:4,19:24:3.23:437,0,3	1/1:5,16:21:42.13:504,42,0	1/1:6,26:31:63.14:738,63,0	0/1:9,5:14:4.58:151,0,5	1/1:2,20:22:50.99:589,51,0	1/1:7,31:40:74.85:854,75,0	1/1:8,19:27:57.17:683,57,0	1/1:2,16:19:47.98:553,48,0	0/1:7,24:34:30.42:566,0,30	0/1:21,1:23:2.76:3,0,532	0/1:30,0:30:11.01:11,0,921	0/0:22,0:23:54.17:0,54,836	0/0:9,0:10:9.93:0,10,322
chr10	19817837	.	A	AGGGG	5236.67	PASS	AC=28;AF=0.519;AN=54;BaseQRankSum=11.237;DP=536;FS=12.933;HRun=0;HaplotypeScore=107.1646;InbreedingCoeff=0.9173;MQ=86.89;MQ0=0;MQRankSum=-8.526;QD=23.80;ReadPosRankSum=-0.960;VQSLOD=3.7811;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:90.25:0,90,1746	0/0:9,0:9:27.09:0,27,566	0/0:23,0:23:56.97:0,57,1011	0/0:15,0:15:39.12:0,39,704	0/0:33,0:33:96.33:0,96,1981	0/0:20,0:20:60.16:0,60,1142	0/0:20,0:20:60.16:0,60,1144	0/0:34,0:34:96.32:0,96,1916	0/0:30,0:30:90.25:0,90,1705	1/1:4,8:18:30.05:548,30,0	1/1:1,6:11:11.90:185,12,0	1/1:10,4:15:18.28:359,18,0	1/1:1,6:11:17.27:355,17,0	1/1:8,3:11:12.03:256,12,0	0/0:26,0:26:78.25:0,78,1572	1/1:3,10:20:2.35:544,2,0	1/1:0,12:17:24.12:595,24,0	1/1:2,11:15:20.67:475,21,0	1/1:13,4:17:16.31:307,16,0	1/1:2,6:20:27.34:335,27,0	1/1:7,8:24:1.59:73,2,0	1/1:1,5:11:8.99:170,9,0	1/1:0,5:16:14.69:284,15,0	1/1:0,13:14:30.10:750,30,0	0/0:25,0:25:72.23:0,72,1419	0/0:16,0:15:45.14:0,45,872	0/0:35,0:35:99:0,102,2005	./.
chr10	19818382	.	AG	A	8889.99	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=18.118;DP=645;FS=0.304;HRun=6;HaplotypeScore=120.4534;InbreedingCoeff=0.9976;MQ=81.52;MQ0=1;MQRankSum=-4.686;QD=27.02;ReadPosRankSum=3.241;VQSLOD=3.8837;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,99,1254	0/0:9,0:9:27.09:0,27,353	0/0:24,0:23:34.19:0,34,574	0/0:35,1:35:41.02:0,41,746	0/0:23,0:23:69.19:0,69,876	0/0:20,0:20:51.17:0,51,669	0/0:18,0:18:54.14:0,54,690	0/0:22,0:22:45.11:0,45,546	0/0:31,0:31:87.21:0,87,1077	1/1:5,15:19:42.10:451,42,0	1/1:0,17:17:45.11:483,45,0	1/1:0,23:23:69.17:741,69,0	1/1:3,32:33:84.17:903,84,0	1/1:1,19:20:57.14:612,57,0	0/0:33,0:33:93.20:0,93,1167	1/1:5,14:19:42.10:451,42,0	1/1:3,34:37:99:1064,99,0	1/1:2,19:21:46.67:488,47,0	1/1:1,13:13:36.08:379,36,0	1/1:1,13:14:39.10:419,39,0	1/1:4,42:45:99:1160,108,0	1/1:1,14:15:42.11:450,42,0	1/1:1,13:14:33.55:355,34,0	1/1:3,31:34:87.22:935,87,0	0/0:22,0:22:60.20:0,60,789	0/0:13,0:13:36.10:0,36,458	0/0:24,0:23:66.17:0,66,836	0/0:5,0:5:15.05:0,15,197
chr10	19818486	.	GTA	G	11537.29	PASS	AC=28;AF=0.519;AN=54;BaseQRankSum=18.848;DP=609;FS=3.472;HRun=0;HaplotypeScore=131.6515;InbreedingCoeff=0.9996;MQ=82.20;MQ0=0;MQRankSum=-4.486;QD=39.65;ReadPosRankSum=3.963;VQSLOD=6.7490;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,114,2145	0/0:9,0:9:24.08:0,24,463	0/0:24,0:24:59.32:0,59,1129	0/0:21,0:21:63.19:0,63,1128	0/0:18,0:18:54.19:0,54,1037	0/0:23,0:23:66.23:0,66,1271	0/0:24,0:24:72.23:0,72,1341	0/0:29,0:29:84.20:0,84,1482	0/0:21,0:21:63.20:0,63,1166	1/1:0,28:27:78.04:1096,78,0	1/1:4,12:16:42.13:620,42,0	1/1:0,18:18:48.16:733,48,0	1/1:0,20:19:51.10:780,51,0	1/1:0,16:16:48.16:734,48,0	0/0:30,0:30:90.31:0,90,1695	1/1:0,22:22:63.21:964,63,0	1/1:1,24:25:69.15:1004,69,0	1/1:0,19:19:45.15:688,45,0	1/1:1,23:24:66.19:963,66,0	1/1:2,23:25:69.23:1029,69,0	1/1:0,26:26:66.22:1000,66,0	1/1:1,17:18:45.15:688,45,0	1/1:1,20:21:54.18:825,54,0	1/1:1,12:13:27.09:413,27,0	0/0:24,0:24:72.25:0,72,1367	0/0:30,0:30:44.76:0,45,1579	0/0:27,0:26:81.26:0,81,1512	./.
chr10	19818536	.	CTTT	C	4975.78	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=8.482;DP=622;FS=4.341;HRun=15;HaplotypeScore=137.4057;InbreedingCoeff=0.9796;MQ=70.34;MQ0=3;MQRankSum=-5.827;QD=17.58;ReadPosRankSum=6.046;VQSLOD=3.1639;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:42:99:0,114,1583	0/0:11,0:12:30:0,30,359	0/0:35,0:20:19.16:0,19,111	0/0:27,0:23:21.85:0,22,133	0/0:19,0:20:54.05:0,54,661	0/0:15,0:15:42.10:0,42,588	0/0:20,0:20:42.11:0,42,656	0/0:8,0:19:24.93:0,25,144	0/0:17,0:19:49.34:0,49,648	1/1:12,10:20:29.70:320,30,0	1/1:4,21:26:52.01:534,52,0	1/1:18,8:27:40.25:458,40,0	1/1:11,6:18:37.45:343,37,0	1/1:14,8:23:18.80:381,19,0	0/0:33,0:34:91.35:0,91,1368	1/1:4,10:15:35.92:363,36,0	1/1:14,14:28:62.04:600,62,0	1/1:7,10:18:31.20:351,31,0	1/1:17,4:20:10.20:271,10,0	1/1:14,11:27:32.58:366,33,0	1/1:7,4:11:14.86:168,15,0	1/1:6,9:16:32.87:351,33,0	1/1:12,3:15:13.90:153,14,0	1/1:7,8:15:11.08:316,11,0	0/0:26,0:27:57.38:0,57,956	0/0:18,0:33:88.38:0,88,1095	0/0:26,0:25:57.10:0,57,829	0/0:7,0:7:17.77:0,18,180
chr10	19818806	.	AAGG	A	18447.89	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=21.303;DP=826;FS=10.972;HRun=0;HaplotypeScore=156.2590;InbreedingCoeff=0.9994;MQ=81.30;MQ0=0;MQRankSum=-7.059;QD=43.92;ReadPosRankSum=4.676;VQSLOD=6.3104;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:59,0:59:99:0,169,3823	0/0:11,0:11:33.11:0,33,749	0/0:23,0:23:46.62:0,47,1477	0/0:34,0:34:99:0,99,2027	0/0:28,0:28:72.25:0,72,1657	0/0:22,0:22:63.19:0,63,1364	0/0:25,0:25:75.26:0,75,1721	0/0:33,0:33:96.33:0,96,2162	0/0:26,0:26:72.25:0,72,1651	1/1:0,33:33:93.32:1567,93,0	1/1:3,23:26:66.23:1122,66,0	1/1:1,31:32:75.26:1274,75,0	1/1:1,48:49:99:2349,138,0	1/1:1,26:27:72.25:1228,72,0	0/0:42,0:42:99:0,123,2811	1/1:1,36:37:39.16:1715,39,0	1/1:1,29:30:75.26:1278,75,0	1/1:2,17:19:42.10:685,42,0	1/1:2,13:15:39.13:665,39,0	1/1:2,23:25:66.23:1125,66,0	1/1:2,34:36:81.28:1379,81,0	1/1:1,35:36:99:1609,99,0	1/1:1,23:24:60.21:1021,60,0	1/1:0,31:31:83.65:1432,84,0	0/0:29,0:29:84.29:0,84,1935	0/0:34,1:35:51.17:0,51,2182	0/0:31,0:31:87.30:0,87,1987	0/0:8,0:8:21.07:0,21,466
chr10	19819130	.	A	AT	10498.45	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=20.249;DP=637;FS=5.080;HRun=4;HaplotypeScore=143.2892;InbreedingCoeff=0.9694;MQ=81.65;MQ0=0;MQRankSum=-5.412;QD=34.09;ReadPosRankSum=1.520;VQSLOD=2.9810;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:69.20:0,69,783	0/0:18,0:18:54.15:0,54,612	0/0:22,0:22:60.12:0,60,649	0/0:18,0:18:45.04:0,45,478	0/0:29,0:29:81.20:0,81,898	0/0:19,0:19:48.14:0,48,545	0/0:27,0:27:75.21:0,75,850	0/0:27,0:27:72.19:0,72,808	0/0:22,0:22:66.19:0,66,749	1/1:3,23:26:66.21:888,66,0	1/1:1,23:24:60.16:795,60,0	1/1:2,22:24:63.21:842,63,0	1/1:1,16:17:48.16:648,48,0	1/1:4,17:21:51.17:681,51,0	0/0:24,0:24:69.20:0,69,782	1/1:1,19:20:54.18:731,54,0	1/1:6,20:26:60.20:821,60,0	1/1:3,13:16:45.10:578,45,0	1/1:1,20:21:60.18:797,60,0	1/1:2,26:28:72.23:962,72,0	1/1:3,4:7:12.04:156,12,0	1/1:1,35:36:96.27:1277,96,0	1/1:3,16:19:48.15:632,48,0	1/1:2,21:23:51.13:689,51,0	0/0:27,0:27:69.19:0,69,782	0/0:29,2:31:2.33:0,2,793	0/0:26,0:26:72.20:0,72,815	0/0:14,0:14:42.12:0,42,476
chr10	19819891	.	G	GT	17601.39	PASS	AB=0.926;AC=29;AF=0.518;AN=56;BaseQRankSum=-1.104;DP=806;FS=13.170;HRun=1;HaplotypeScore=96.1414;InbreedingCoeff=0.9365;MQ=85.02;MQ0=0;MQRankSum=-4.669;QD=38.52;ReadPosRankSum=4.250;VQSLOD=4.0355;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:61,0:61:99:0,172,2200	0/0:15,0:15:45.15:0,45,583	0/0:24,0:24:70:0,70,843	0/0:28,0:28:69.17:0,69,863	0/0:24,0:24:66.20:0,66,841	0/0:18,0:18:51.17:0,51,662	0/0:26,0:26:78.25:0,78,1013	0/0:31,0:31:87.26:0,87,1104	0/0:26,0:26:75.24:0,75,973	1/1:0,33:33:93.23:1319,93,0	1/1:1,26:27:75.25:1100,75,0	1/1:0,24:24:66.22:989,66,0	1/1:0,25:25:72.24:1075,72,0	1/1:0,45:45:99:1912,129,0	0/0:32,0:31:90.26:0,90,1139	1/1:0,36:36:96.33:1438,96,0	1/1:2,31:34:90.30:1338,90,0	1/1:2,13:15:39.13:584,39,0	1/1:1,19:20:57.19:854,57,0	1/1:1,31:32:87.24:1276,87,0	1/1:2,48:50:99:2023,135,0	1/1:1,19:20:51.17:764,51,0	1/1:1,35:36:96.33:1436,96,0	1/1:0,35:35:99:1484,99,0	0/0:27,0:27:81.26:0,81,1052	0/1:23,1:25:8.33:8,0,762	0/0:31,0:30:93.29:0,93,1195	0/0:6,0:6:18.04:0,18,218
chr10	19820269	.	TTTCTCTCAGC	T	18500.13	PASS	AB=0.971;AC=29;AF=0.518;AN=56;BaseQRankSum=18.162;DP=628;FS=2.747;HRun=0;HaplotypeScore=217.6091;InbreedingCoeff=0.9347;MQ=80.01;MQ0=0;MQRankSum=-18.294;QD=58.18;ReadPosRankSum=0.776;VQSLOD=4.7500;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:72.25:0,72,3301	0/0:21,0:21:60.21:0,60,3072	0/0:28,0:28:69.21:0,69,2794	0/0:28,0:27:66.19:0,66,2598	0/0:25,0:25:75.26:0,75,3752	0/0:26,0:26:78.27:0,78,3933	0/0:17,0:17:51.18:0,51,2478	0/0:29,0:28:81.28:0,81,3602	0/0:21,0:21:63.22:0,63,3218	1/1:4,22:26:57.20:1802,57,0	1/1:3,22:25:51.17:1478,51,0	1/1:9,18:27:51.18:1629,51,0	1/1:1,22:23:63.22:2036,63,0	1/1:4,18:22:42.14:1356,42,0	0/0:31,0:31:87.30:0,87,4166	1/1:1,16:17:42.14:1318,42,0	1/1:4,13:17:33.11:1068,33,0	1/1:1,7:8:15.05:443,15,0	1/1:2,10:12:27.09:821,27,0	1/1:4,19:22:51.17:1491,51,0	1/1:4,8:12:15.05:412,15,0	1/1:2,31:33:84.29:2366,84,0	1/1:5,25:30:60.20:1700,60,0	1/1:2,8:10:18.06:574,18,0	0/0:16,0:16:45.15:0,45,2241	0/1:32,1:33:6.80:7,0,4272	0/0:37,0:37:99:0,108,5483	0/0:7,0:7:21.07:0,21,1079
chr10	19820645	.	A	ATACT	11095.06	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=9.062;DP=570;FS=14.568;HRun=0;HaplotypeScore=123.9525;InbreedingCoeff=0.9907;MQ=63.99;MQ0=11;MQRankSum=-10.168;QD=53.09;ReadPosRankSum=-0.395;VQSLOD=5.3676;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,108,1932	0/0:12,0:12:27.09:0,27,512	0/0:53,0:36:49.42:0,49,1551	0/0:57,0:36:88.31:0,88,1511	0/0:18,0:18:51.15:0,51,926	0/0:17,0:16:45.95:0,46,807	0/0:23,0:23:63.15:0,63,1096	0/0:22,0:22:60.21:0,60,1123	0/0:21,0:21:54.17:0,54,986	1/1:1,12:12:36.12:970,36,0	1/1:1,8:9:15.01:361,15,0	1/1:5,11:16:39.13:1000,39,0	1/1:9,11:20:23.26:994,23,0	1/1:5,13:18:45.15:1149,45,0	0/0:30,0:30:78.25:0,78,1400	1/1:1,9:10:17.96:460,18,0	1/1:2,10:13:33.58:838,34,0	1/1:3,6:9:21.07:523,21,0	1/1:3,11:15:36.01:777,36,0	1/1:4,11:14:33.07:828,33,0	1/1:7,11:17:17.57:837,18,0	1/1:4,12:16:37.33:879,37,0	1/1:1,13:14:33.07:797,33,0	1/1:9,14:18:12.87:682,13,0	0/0:16,0:16:39.13:0,39,715	0/0:18,0:18:51.17:0,51,968	0/0:20,0:20:47.82:0,48,828	0/0:12,0:12:36.12:0,36,682
chr10	19820659	.	CAA	C	1397.71	PASS	AB=1.000;AC=26;AF=0.464;AN=56;BaseQRankSum=10.008;DP=516;FS=5.785;HRun=3;HaplotypeScore=119.2530;InbreedingCoeff=0.7216;MQ=53.45;MQ0=23;MQRankSum=-5.324;QD=7.36;ReadPosRankSum=-0.292;VQSLOD=-0.0201;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:55.07:0,55,776	0/0:9,0:9:17.14:0,17,163	0/0:46,0:25:47.93:0,48,494	0/0:60,0:30:81.74:0,82,729	0/0:17,0:17:34.51:0,35,413	0/0:22,0:21:12.38:0,12,391	0/1:22,0:22:5.13:5,0,394	0/0:20,0:19:56.90:0,57,509	0/0:18,0:18:21.57:0,22,303	1/1:13,0:12:34.26:251,34,0	1/1:7,0:7:5.86:48,6,0	1/1:11,0:12:8.59:69,9,0	1/1:12,0:13:21.91:152,22,0	1/1:11,0:11:20.70:155,21,0	0/0:25,0:25:37.94:0,38,635	0/0:7,0:7:0.37:0,0,2	1/1:14,0:13:23.90:164,24,0	1/1:8,0:8:17.78:136,18,0	1/1:11,0:10:23.83:176,24,0	1/1:11,0:10:15.78:131,16,0	0/1:17,0:14:14.63:80,0,15	1/1:15,1:16:9.17:100,9,0	1/1:12,0:12:2.44:23,2,0	1/1:20,3:18:14.10:111,14,0	0/0:12,0:12:7.64:0,8,207	0/0:17,0:15:32.69:0,33,357	0/0:17,0:17:4.14:0,4,204	0/0:11,0:11:2.12:0,2,166
chr10	19820661	.	AAC	A	328.73	PASS	AB=0.977;AC=20;AF=0.435;AN=46;BaseQRankSum=1.992;DP=557;FS=2.106;HRun=0;HaplotypeScore=129.9766;InbreedingCoeff=0.0563;MQ=51.50;MQ0=29;MQRankSum=-0.344;QD=1.21;ReadPosRankSum=0.850;VQSLOD=2.6572;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:44,1:45:2.75:117,0,3	1/1:6,3:9:2.84:32,3,0	./.	./.	0/1:18,1:23:29.79:30,0,69	0/0:22,0:22:12.44:0,12,129	0/1:23,0:23:6.71:7,0,60	./.	0/1:19,0:19:32.95:33,0,33	0/0:18,0:17:6.64:0,7,26	0/0:8,0:7:2.61:0,3,11	0/0:14,0:13:2.50:0,2,9	0/1:14,0:14:3.03:3,0,9	0/0:12,0:12:0:0,0,0	0/1:26,0:26:13.52:14,0,293	0/0:8,0:6:0.76:0,1,8	0/0:18,0:16:2.45:0,2,15	0/1:9,0:9:6.23:8,0,6	./.	0/0:13,0:12:5.65:0,6,31	0/0:20,0:16:7.53:0,8,34	1/1:19,0:17:3.48:19,3,0	./.	1/1:23,0:18:2.47:13,2,0	0/1:13,1:15:16.12:37,0,16	1/1:17,1:15:2.69:31,3,0	1/1:12,3:16:14.29:104,14,0	1/1:11,0:11:3.22:12,3,0
chr10	19820938	.	A	ATTT	7788.28	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-1.862;DP=524;FS=2.725;HRun=10;HaplotypeScore=80.3259;InbreedingCoeff=0.9678;MQ=80.01;MQ0=0;MQRankSum=-5.200;QD=34.46;ReadPosRankSum=-1.760;VQSLOD=4.2658;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:32:70.50:0,71,873	0/0:7,0:7:18.05:0,18,219	0/0:25,0:24:32.23:0,32,350	0/0:17,0:12:10.92:0,11,84	0/0:25,0:26:63.04:0,63,735	0/0:32,0:33:85.60:0,86,1055	0/0:19,0:20:54.08:0,54,637	0/0:24,0:24:60.12:0,60,698	0/0:14,0:14:42.12:0,42,499	1/1:7,10:19:30.52:543,31,0	1/1:1,7:12:30.02:427,30,0	1/1:2,9:11:18.06:346,18,0	1/1:1,11:13:30.08:542,30,0	1/1:4,7:12:12.04:216,12,0	0/0:20,0:21:51.04:0,51,588	1/1:4,10:15:30.08:524,30,0	1/1:5,21:27:63.22:1181,63,0	1/1:2,15:20:42.12:743,42,0	1/1:11,9:24:45.01:637,45,0	1/1:4,16:21:48.03:788,48,0	1/1:2,4:7:15.05:270,15,0	1/1:4,15:20:42.08:703,42,0	1/1:3,2:8:8.99:104,9,0	1/1:2,13:16:42.12:765,42,0	0/0:23,0:23:57.11:0,57,693	0/0:27,1:28:8.53:0,9,676	0/0:22,0:22:60.15:0,60,729	0/0:6,0:6:18.06:0,18,219
chr10	19821119	.	GGT	G	983.84	PASS	AB=0.914;AC=9;AF=0.167;AN=54;BaseQRankSum=4.794;DP=647;FS=2.660;HRun=0;HaplotypeScore=142.0814;InbreedingCoeff=0.0166;MQ=64.00;MQ0=5;MQRankSum=3.625;QD=4.10;ReadPosRankSum=-2.377;VQSLOD=2.8286;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:29,4:34:74.85:75,0,950	0/1:11,2:13:33.20:33,0,475	0/0:30,0:17:5.98:0,6,49	0/0:26,0:15:24.06:0,24,335	0/1:23,4:27:75.55:76,0,786	0/1:30,3:32:3.15:3,0,930	0/0:18,0:17:33.08:0,33,461	1/1:19,32:46:59.78:905,60,0	0/0:21,0:21:48.16:0,48,745	0/0:23,0:26:8.19:0,8,255	0/0:17,0:18:8.49:0,8,65	0/0:7,0:11:6:0,6,52	0/0:12,0:16:8.11:0,8,54	0/0:9,0:10:5.46:0,5,37	0/1:26,2:28:9.18:9,0,844	0/0:12,0:15:10.73:0,11,86	0/0:22,0:26:14.73:0,15,115	0/0:6,0:6:5.11:0,5,26	0/0:24,0:23:26.93:0,27,227	0/0:22,0:27:19.22:0,19,182	./.	0/1:22,0:25:2.98:3,0,50	0/0:13,0:14:2.66:0,3,15	0/0:7,0:10:4.96:0,5,19	0/1:27,2:29:12.16:12,0,794	0/0:37,2:39:34.54:0,35,1351	0/0:32,0:31:33.07:0,33,978	0/0:16,0:16:42.61:0,43,668
chr10	19821138	.	GTC	G	668.91	PASS	AB=0.985;AC=20;AF=0.370;AN=54;BaseQRankSum=9.670;DP=628;FS=0.000;HRun=0;HaplotypeScore=150.1596;InbreedingCoeff=0.4418;MQ=54.38;MQ0=6;MQRankSum=-0.350;QD=2.78;ReadPosRankSum=-3.479;VQSLOD=1.7630;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:40,1:41:58.46:0,58,1369	0/0:15,0:15:21.15:0,21,646	0/0:25,0:8:5.18:0,5,81	0/0:34,0:18:40.91:0,41,482	0/0:29,0:29:35.22:0,35,1057	0/0:32,0:31:54.32:0,54,1235	0/0:24,0:23:59.91:0,60,775	0/1:48,0:43:99:127,0,305	0/0:20,0:20:57.14:0,57,985	1/1:23,2:25:2.02:268,2,0	1/1:10,4:14:5.30:48,5,0	0/0:11,0:11:1.59:0,2,13	0/1:15,0:15:1.01:26,0,1	0/1:8,0:8:2.57:20,0,3	0/0:26,0:26:55.10:0,55,1170	0/1:13,0:12:5.53:39,0,6	1/1:25,0:24:14.64:124,15,0	1/1:3,0:3:4.76:35,5,0	0/1:15,0:13:3:3,0,56	1/1:28,1:29:2.35:77,2,0	./.	1/1:23,1:24:0.17:54,0,0	1/1:12,0:11:0.79:2,1,0	0/1:9,1:9:0.18:0,0,4	0/0:26,0:26:53.04:0,53,1075	0/0:40,0:40:99:0,105,1864	0/0:32,0:31:71.72:0,72,1240	0/0:16,0:16:45.06:0,45,771
chr10	19821182	.	T	TTCTC	10710.62	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=5.376;DP=577;FS=17.621;HRun=0;HaplotypeScore=140.9624;InbreedingCoeff=0.9873;MQ=78.76;MQ0=0;MQRankSum=-11.392;QD=59.50;ReadPosRankSum=-4.357;VQSLOD=4.0997;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:93.26:0,93,1678	0/0:15,0:15:42.14:0,42,786	0/0:32,0:31:39.84:0,40,1136	0/0:39,0:36:52.67:0,53,1377	0/0:32,0:32:81.26:0,81,1480	0/0:33,0:33:93.30:0,93,1726	0/0:23,0:22:57.20:0,57,1077	0/0:38,0:38:99:0,102,1827	0/0:21,0:21:57.17:0,57,1000	1/1:1,13:15:42.09:1046,42,0	1/1:4,10:14:21.02:504,21,0	1/1:3,18:21:48.16:1242,48,0	1/1:3,7:10:24.08:630,24,0	1/1:2,7:9:21.02:561,21,0	0/0:35,0:35:99:0,99,1865	1/1:3,8:10:30.10:749,30,0	1/1:2,11:12:27.05:661,27,0	1/1:1,4:5:15.05:399,15,0	1/1:2,10:11:33.11:803,33,0	1/1:3,14:18:48.16:1215,48,0	1/1:1,11:11:30.10:794,30,0	1/1:1,16:18:35.78:962,36,0	1/1:4,12:16:36.12:908,36,0	1/1:1,5:5:8.58:238,9,0	0/0:19,0:19:51.08:0,51,863	0/0:34,0:34:96.12:0,96,1673	0/0:29,0:29:81.26:0,81,1489	0/0:12,0:12:32.92:0,33,510
chr10	19821253	.	C	CCTCTCTCTCTCTCTCTCTCT	9507.41	PASS	AB=0.976;AC=25;AF=0.463;AN=54;BaseQRankSum=4.125;DP=645;FS=9.862;HRun=0;HaplotypeScore=326.4711;InbreedingCoeff=0.6997;MQ=63.64;MQ0=11;MQRankSum=-10.878;QD=33.13;ReadPosRankSum=-3.139;VQSLOD=1.5926;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:83.93:0,84,4064	0/0:7,0:7:11.95:0,12,478	0/1:38,0:22:25.27:25,0,255	0/0:65,0:44:22.75:0,23,833	0/0:28,0:28:78.25:0,78,3840	0/0:19,0:23:36.09:0,36,1485	0/0:28,0:29:57.90:0,58,2448	0/1:23,0:23:99:202,0,295	0/0:25,0:25:53.71:0,54,2661	1/1:23,0:24:51.12:2358,51,0	./.	1/1:17,0:17:3.01:38,3,0	1/1:20,0:22:28.30:1169,28,0	1/1:12,0:19:12.51:243,13,0	0/0:39,0:39:96.33:0,96,4947	1/1:18,0:18:15.52:740,16,0	1/1:12,0:12:18.53:994,19,0	1/1:7,1:9:15.05:1145,15,0	1/1:23,2:23:48.12:2492,48,0	1/1:17,0:18:8.75:68,9,0	0/0:14,0:11:0.11:0,0,0	1/1:17,0:18:2.90:30,3,0	0/1:12,0:13:0:0,0,0	1/1:17,7:26:1.41:3,1,0	0/0:27,0:27:63.22:0,63,2917	0/0:23,0:23:54.18:0,54,2238	0/0:24,0:24:45.14:0,45,2138	0/0:6,0:6:12.04:0,12,410
chr10	19821270	.	CTG	C	1138.08	PASS	AB=0.966;AC=34;AF=0.630;AN=54;BaseQRankSum=3.400;DP=649;FS=16.215;HRun=0;HaplotypeScore=132.1011;InbreedingCoeff=-0.0681;MQ=51.77;MQ0=11;MQRankSum=1.063;QD=2.24;ReadPosRankSum=-4.735;VQSLOD=-0.6183;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,6:38:31.97:0,32,732	0/1:6,0:5:2.73:3,0,38	./.	0/0:33,0:16:0:0,0,0	0/1:32,2:34:42.37:42,0,482	0/0:23,0:23:9.35:0,9,375	0/1:29,1:33:90.07:90,0,352	0/1:26,0:25:35.83:36,0,167	0/1:25,2:27:20.07:20,0,485	0/0:29,0:29:18.84:0,19,284	0/1:16,0:15:15.46:15,0,59	1/1:12,1:13:8.87:62,9,0	1/1:29,0:29:17.64:123,18,0	1/1:19,0:19:5.84:48,6,0	0/1:40,0:40:21.74:22,0,656	1/1:18,0:16:11.50:85,11,0	1/1:15,0:14:5.54:66,6,0	1/1:10,0:9:4.36:80,4,0	0/1:23,0:23:18.79:19,0,50	1/1:21,0:20:8.96:69,9,0	1/1:24,0:22:3.16:117,3,0	1/1:21,0:21:11.92:87,12,0	1/1:13,0:13:8.82:72,9,0	1/1:30,0:30:2.99:25,3,0	0/1:21,5:28:99:118,0,514	0/1:28,0:28:35.29:35,0,378	0/1:22,1:24:56.29:56,0,309	0/1:9,0:8:8.58:9,0,102
chr10	19822533	.	A	ATCAAGATGTGAGCTC	35797.90	PASS	AB=0.861;AC=28;AF=0.500;AN=56;BaseQRankSum=-4.381;DP=547;FS=4.191;HRun=0;HaplotypeScore=198.6019;InbreedingCoeff=0.8485;MQ=84.28;MQ0=0;MQRankSum=-17.275;QD=125.17;ReadPosRankSum=1.789;VQSLOD=4.3444;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:75.26:0,75,3027	0/0:7,0:7:21.07:0,21,906	0/0:26,0:26:66.19:0,66,2396	0/0:20,0:20:45.15:0,45,1761	0/0:12,0:12:36.12:0,36,1513	0/0:10,0:10:30.10:0,30,1249	0/0:25,0:25:75.23:0,75,2674	0/0:33,0:33:87.30:0,87,3519	0/0:22,0:22:63.22:0,63,2737	1/1:4,6:10:24.08:1546,24,0	1/1:12,6:21:36.12:2499,36,0	1/1:9,10:21:51.18:3613,51,0	1/1:8,10:21:51.18:3529,51,0	1/1:9,9:18:39.13:2777,39,0	0/0:20,0:20:54.19:0,54,2288	0/1:16,8:26:80.92:3332,0,81	1/1:9,4:16:30.10:1942,30,0	1/1:7,8:18:33.11:2300,33,0	1/1:16,4:21:60.21:3008,60,0	1/1:10,8:17:33.11:2330,33,0	1/1:10,3:16:18.06:1264,18,0	1/1:13,7:21:42.14:2769,42,0	1/1:13,12:26:60.21:4019,60,0	1/1:9,1:12:11.88:840,12,0	0/0:18,0:18:51.16:0,51,2012	0/1:20,0:20:30.64:31,0,1872	0/0:34,0:34:93.32:0,93,4074	0/0:5,0:5:15.05:0,15,657
chr10	19822894	.	CA	C	4450.71	PASS	AB=0.955;AC=29;AF=0.518;AN=56;BaseQRankSum=10.450;DP=522;FS=1.600;HRun=11;HaplotypeScore=56.5364;InbreedingCoeff=0.9106;MQ=65.92;MQ0=17;MQRankSum=1.666;QD=17.59;ReadPosRankSum=3.276;VQSLOD=5.8312;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,6:47:30.92:0,31,925	0/0:7,0:7:21.05:0,21,221	0/0:11,0:7:13.62:0,14,105	0/0:15,0:11:7.75:0,8,140	0/1:19,1:20:7.30:7,0,312	0/0:25,1:25:41.39:0,41,630	0/0:16,0:16:41.93:0,42,423	0/0:26,1:26:47.48:0,47,686	0/0:23,1:24:40.47:0,40,571	1/1:1,14:15:41.95:345,42,0	1/1:2,16:17:40.98:326,41,0	1/1:3,17:19:44.95:369,45,0	1/1:3,10:11:29.97:246,30,0	1/1:3,10:13:23.97:197,24,0	0/0:15,1:15:8.40:0,8,283	1/1:7,11:18:32.95:271,33,0	1/1:2,18:21:49.98:400,50,0	1/1:2,16:17:47.95:394,48,0	1/1:4,11:15:34.97:277,35,0	1/1:1,17:18:47.90:388,48,0	1/1:2,7:9:17.96:148,18,0	1/1:1,11:12:29.96:246,30,0	1/1:1,20:21:56.72:467,57,0	1/1:1,18:18:44.93:369,45,0	0/0:20,0:19:40.26:0,40,449	0/0:19,1:20:29.49:0,29,519	0/0:26,1:28:25.86:0,26,652	0/0:8,0:7:12.03:0,12,128
chr10	19823100	.	AGTT	A	14034.01	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=15.507;DP=658;FS=6.041;HRun=0;HaplotypeScore=99.3027;InbreedingCoeff=0.9995;MQ=86.51;MQ0=0;MQRankSum=-2.089;QD=40.56;ReadPosRankSum=1.521;VQSLOD=5.6792;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,132,2775	0/0:8,0:8:24.08:0,24,528	0/0:26,0:26:63.19:0,63,1296	0/0:21,0:21:50.96:0,51,961	0/0:30,0:30:81.26:0,81,1709	0/0:20,0:20:60.21:0,60,1305	0/0:26,0:26:78.20:0,78,1622	1/1:2,22:24:66.21:1028,66,0	0/0:23,0:23:69.24:0,69,1499	1/1:2,30:32:90.31:1435,90,0	1/1:0,21:21:63.21:976,63,0	1/1:1,20:21:54.18:867,54,0	1/1:3,26:29:72.25:1155,72,0	1/1:4,22:26:60.20:952,60,0	0/0:26,0:26:78.27:0,78,1688	1/1:1,20:21:57.19:915,57,0	1/1:3,27:30:63.21:1000,63,0	1/1:0,15:15:36.12:577,36,0	1/1:2,19:21:57.19:905,57,0	1/1:0,23:23:66.23:1058,66,0	1/1:1,14:15:33.11:518,33,0	1/1:1,19:20:48.63:771,49,0	1/1:4,28:32:75.26:1203,75,0	1/1:0,16:16:42.14:674,42,0	0/0:22,0:22:63.21:0,63,1359	0/0:23,0:23:69.21:0,69,1442	0/0:33,0:33:99:0,99,2156	0/0:9,0:9:27.09:0,27,591
chr10	19824894	.	C	CGT	3768.01	PASS	AB=0.824;AC=20;AF=0.357;AN=56;BaseQRankSum=7.735;DP=580;FS=2.473;HRun=0;HaplotypeScore=132.1559;InbreedingCoeff=0.3431;MQ=58.09;MQ0=8;MQRankSum=0.533;QD=10.70;ReadPosRankSum=1.741;VQSLOD=3.4874;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:22:39.07:0,39,507	0/0:12,0:12:23.98:0,24,279	0/0:7,0:6:13.63:0,14,113	0/0:5,0:3:3:0,3,29	0/0:20,0:19:23.84:0,24,325	0/0:11,0:11:10.99:0,11,170	0/0:28,0:27:48.42:0,48,638	0/0:16,0:16:45:0,45,431	0/0:20,0:20:43.32:0,43,474	1/1:18,4:22:22.72:320,23,0	0/1:17,0:17:5.45:102,0,5	1/1:22,8:30:21.88:402,22,0	0/1:9,12:21:46.26:184,0,46	0/1:24,14:39:9.81:204,0,10	0/0:23,0:23:43.69:0,44,467	0/1:15,5:19:18.84:218,0,19	0/1:20,12:32:3.61:579,0,4	0/1:17,5:21:37.08:224,0,37	0/1:15,2:17:38.39:129,0,38	1/1:9,11:21:13.44:209,13,0	1/1:42,5:45:6.30:430,6,0	0/1:11,0:11:26.82:50,0,27	1/1:8,1:9:5.78:45,6,0	1/1:33,11:42:9.19:674,9,0	0/0:19,0:19:25.63:0,26,352	0/0:21,1:21:8.26:0,8,556	0/0:14,0:14:35.55:0,36,344	0/0:8,0:8:11.93:0,12,147
chr10	19824901	.	G	GCACA	4894.19	PASS	AB=0.895;AC=29;AF=0.558;AN=52;BaseQRankSum=2.215;DP=616;FS=0.000;HRun=0;HaplotypeScore=156.9049;InbreedingCoeff=-0.4138;MQ=55.93;MQ0=12;MQRankSum=-0.266;QD=8.63;ReadPosRankSum=-0.242;VQSLOD=4.0170;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:17,6:23:40.98:65,0,41	0/1:6,3:9:37.92:65,0,38	./.	./.	0/1:7,12:22:0:0,0,0	0/1:4,0:9:16.68:25,0,17	0/1:19,0:26:0.90:1,0,257	1/1:18,0:18:9.47:100,9,0	0/0:15,0:20:8.23:0,8,240	0/1:24,0:24:6.16:323,0,6	0/1:16,0:16:42.03:42,0,74	1/1:35,0:34:43.75:518,44,0	0/1:23,0:22:19.19:194,0,19	0/1:37,0:37:39.06:144,0,39	0/0:10,0:20:5.51:0,6,164	0/1:19,0:18:8.29:217,0,8	0/1:34,0:33:77.79:478,0,78	0/1:25,0:24:97.50:217,0,98	0/1:20,0:20:78.85:90,0,79	1/1:26,0:25:20.93:225,21,0	0/1:54,0:52:52.12:335,0,52	0/1:15,0:15:21.86:211,0,22	1/1:12,0:11:9.01:102,9,0	0/1:43,0:41:88.46:660,0,88	1/1:11,5:18:10.99:105,11,0	0/1:20,5:25:15.24:367,0,15	0/1:9,5:16:29.05:308,0,29	0/1:12,1:13:25.26:101,0,25
chr10	19825760	.	TTGTGTGTG	T	110.60	PASS	AB=0.886;AC=8;AF=0.154;AN=52;BaseQRankSum=3.357;DP=517;FS=0.000;HRun=0;HaplotypeScore=154.7265;InbreedingCoeff=0.4037;MQ=43.44;MQ0=100;MQRankSum=0.031;QD=1.52;ReadPosRankSum=-2.491;VQSLOD=2.0989;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:21:29.64:0,30,325	0/0:7,0:6:11.06:0,11,148	1/1:3,0:1:2.04:6,2,0	./.	0/0:16,0:16:9.37:0,9,105	0/0:18,0:15:8.95:0,9,103	0/0:33,0:30:50.62:0,51,635	0/1:12,5:16:2:182,0,2	0/0:20,0:17:10.86:0,11,114	0/0:21,0:15:7.32:0,7,201	1/1:12,0:9:1.35:3,1,0	0/0:26,0:20:12.93:0,13,83	0/0:22,0:17:1.24:0,1,3	0/0:16,0:13:6.94:0,7,36	0/0:17,0:15:14.62:0,15,158	0/0:16,0:13:0:0,0,0	1/1:29,0:21:0.63:3,1,0	0/0:19,0:11:2.30:0,2,5	./.	0/0:10,0:8:1.60:0,2,23	0/0:50,0:42:1.68:0,2,6	0/1:12,0:8:0.01:0,0,0	0/0:10,0:8:0:0,0,0	0/0:41,0:31:5.35:0,5,22	0/0:13,0:7:5.76:0,6,61	0/0:26,0:25:39.87:0,40,552	0/0:13,0:9:15.52:0,16,221	0/0:9,0:4:5:0,5,74
chr10	19828603	.	TC	T	7264.33	PASS	AB=0.953;AC=32;AF=0.571;AN=56;BaseQRankSum=11.697;DP=642;FS=11.081;HRun=10;HaplotypeScore=74.0743;InbreedingCoeff=0.8740;MQ=80.72;MQ0=0;MQRankSum=-1.501;QD=18.63;ReadPosRankSum=2.495;VQSLOD=5.1506;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,3:38:12.11:0,12,810	0/0:16,0:16:36.08:0,36,389	0/1:21,0:21:26.81:27,0,315	0/0:16,0:16:23.06:0,23,211	0/0:18,1:20:22.16:0,22,434	0/0:20,0:20:42.11:0,42,465	0/0:18,0:18:48.13:0,48,531	1/1:9,20:31:57.99:473,58,0	0/0:27,1:28:46.08:0,46,720	1/1:1,22:23:62.98:547,63,0	1/1:2,16:18:44.98:391,45,0	1/1:4,26:30:68.97:599,69,0	1/1:3,22:25:65.98:572,66,0	1/1:2,16:18:44.99:390,45,0	0/0:38,0:38:96.23:0,96,1038	1/1:4,19:24:50.02:423,50,0	1/1:4,20:24:56.97:495,57,0	1/1:0,13:13:35.99:312,36,0	1/1:1,12:13:35.99:312,36,0	1/1:2,14:16:38.98:338,39,0	1/1:5,31:36:73.11:761,73,0	1/1:1,17:19:50.02:423,50,0	1/1:0,23:23:68.99:599,69,0	1/1:4,23:27:68.98:599,69,0	0/0:25,0:25:63.16:0,63,688	0/0:22,0:22:45.10:0,45,481	0/1:26,3:28:2.95:3,0,655	0/0:11,0:11:27.05:0,27,287
chr10	19833454	.	CA	C	446.82	PASS	AB=0.906;AC=3;AF=0.054;AN=56;BaseQRankSum=5.170;DP=734;FS=7.770;HRun=10;HaplotypeScore=77.4133;InbreedingCoeff=0.6630;MQ=64.46;MQ0=3;MQRankSum=-0.643;QD=7.70;ReadPosRankSum=-2.638;VQSLOD=1.2792;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:43,2:45:77.16:0,77,1265	0/0:10,0:10:30.08:0,30,331	0/0:22,0:18:38.20:0,38,429	0/0:15,0:11:17.01:0,17,153	0/0:34,0:33:86.12:0,86,1002	0/0:21,0:22:53.69:0,54,555	0/0:23,0:23:63.17:0,63,696	1/1:8,21:28:62.94:539,63,0	0/0:31,0:31:77.95:0,78,851	0/0:33,1:38:69.66:0,70,919	0/0:21,0:21:54.15:0,54,597	0/0:17,0:17:45.11:0,45,490	0/0:23,0:23:56.18:0,56,604	0/0:19,1:20:33.93:0,34,573	0/0:28,0:28:75.20:0,75,823	0/0:43,0:43:94.97:0,95,1207	0/0:27,0:27:78.17:0,78,841	0/0:16,0:16:42.07:0,42,443	0/0:27,1:28:49.09:0,49,734	0/0:24,0:24:57.11:0,57,597	0/0:12,0:12:33.05:0,33,345	0/1:25,3:29:10.41:10,0,524	0/0:30,1:31:46.10:0,46,720	0/0:31,1:33:60.85:0,61,865	0/0:18,0:18:47.81:0,48,477	0/0:37,0:37:70.67:0,71,973	0/0:43,0:44:99:0,120,1308	0/0:11,0:13:38.77:0,39,393
chr10	19838225	.	AAGGAGG	A	8791.35	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=15.257;DP=693;FS=3.144;HRun=0;HaplotypeScore=143.3756;InbreedingCoeff=0.9841;MQ=61.49;MQ0=9;MQRankSum=-9.919;QD=25.78;ReadPosRankSum=-1.288;VQSLOD=4.3288;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:33:81.17:0,81,2076	0/0:8,0:8:24.05:0,24,577	0/0:19,0:13:32.88:0,33,507	0/0:23,0:19:15.86:0,16,388	0/0:30,0:30:69.23:0,69,2158	0/0:28,0:29:72.18:0,72,1984	0/0:25,0:25:63.19:0,63,1538	0/0:30,0:30:45.13:0,45,1045	0/0:31,0:31:87.26:0,87,2328	1/1:4,19:23:60.17:1094,60,0	1/1:5,17:21:47.81:698,48,0	1/1:7,17:24:27.09:565,27,0	1/1:3,19:21:30.10:646,30,0	1/1:5,16:21:24.08:507,24,0	0/0:24,0:25:54.11:0,54,1361	1/1:3,17:20:21.07:446,21,0	1/1:6,22:28:23.75:449,24,0	1/1:9,12:21:8.98:148,9,0	1/1:7,19:25:57.11:908,57,0	1/1:3,25:28:72.09:1225,72,0	1/1:5,20:25:15.05:304,15,0	1/1:1,24:25:44.91:745,45,0	1/1:8,21:28:38.54:767,39,0	1/1:6,20:26:15.05:290,15,0	0/0:28,0:28:75.22:0,75,2074	0/0:31,0:31:66.22:0,66,1958	0/0:25,0:26:66.17:0,66,1882	0/0:13,0:13:30.10:0,30,888
chr10	19839557	.	G	GT	8750.82	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-13.640;DP=574;FS=4.353;HRun=6;HaplotypeScore=55.5234;InbreedingCoeff=0.9985;MQ=76.33;MQ0=1;MQRankSum=0.000;QD=31.71;ReadPosRankSum=4.606;VQSLOD=5.2119;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:87.19:0,87,887	0/0:9,0:9:21.05:0,21,214	0/0:22,0:20:40.72:0,41,386	0/0:19,1:18:31.77:0,32,302	0/0:29,0:29:72.14:0,72,726	0/0:15,0:15:42.09:0,42,428	0/0:10,0:10:30.07:0,30,306	0/0:31,0:31:71.77:0,72,716	0/0:14,0:14:39.07:0,39,390	1/1:4,21:25:63.18:777,63,0	1/1:5,23:28:69.21:848,69,0	1/1:0,16:16:45.14:566,45,0	1/1:2,21:23:54.17:679,54,0	1/1:1,10:11:30.10:377,30,0	0/0:23,0:23:66.15:0,66,673	1/1:1,10:11:30.10:377,30,0	1/1:0,29:29:75.24:944,75,0	1/1:5,7:12:24.08:299,24,0	1/1:3,25:28:75.21:905,75,0	1/1:3,24:27:69.18:838,69,0	1/1:0,8:8:24.08:302,24,0	1/1:2,14:16:42.13:524,42,0	1/1:3,18:21:54.17:674,54,0	1/1:1,20:21:51.16:642,51,0	0/0:22,0:22:57.13:0,57,580	0/0:25,0:25:75.17:0,75,764	0/0:35,0:34:99:0,102,1040	0/0:10,0:10:30.07:0,30,306
chr10	19841506	.	TA	T	4550.30	PASS	AB=0.808;AC=29;AF=0.518;AN=56;BaseQRankSum=10.677;DP=516;FS=1.579;HRun=11;HaplotypeScore=56.8757;InbreedingCoeff=0.7798;MQ=70.12;MQ0=0;MQRankSum=0.389;QD=15.69;ReadPosRankSum=4.354;VQSLOD=5.5027;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:24:61.35:0,61,624	0/0:4,0:5:8.86:0,9,78	0/0:8,0:8:4.21:0,4,91	0/0:11,0:11:15.03:0,15,156	0/0:26,2:29:34.72:0,35,746	0/1:17,2:19:4.08:4,0,363	0/0:7,0:7:18.03:0,18,183	0/0:24,0:27:40.69:0,41,597	0/0:18,2:20:23.46:0,23,448	1/1:7,17:24:21.94:386,22,0	1/1:3,23:26:56.89:467,57,0	1/1:3,15:18:41.95:345,42,0	1/1:1,19:20:52.76:424,53,0	1/1:4,14:18:41.94:345,42,0	0/0:16,0:16:39.09:0,39,409	1/1:3,15:19:15:319,15,0	1/1:1,11:12:32.96:271,33,0	1/1:2,9:12:18.15:214,18,0	1/1:1,16:18:49.93:392,50,0	1/1:5,22:27:62.89:516,63,0	1/1:2,8:10:23.96:197,24,0	1/1:3,8:11:23.97:197,24,0	0/1:6,9:15:37.02:145,0,37	1/1:3,13:16:38.94:320,39,0	0/0:21,1:24:35.12:0,35,540	0/0:32,0:34:81.01:0,81,831	0/1:22,3:25:7.77:8,0,542	0/0:18,1:21:29.16:0,29,484
chr10	19841689	.	T	TA	8840.14	PASS	AB=0.905;AC=31;AF=0.554;AN=56;BaseQRankSum=-13.379;DP=565;FS=1.888;HRun=7;HaplotypeScore=55.7689;InbreedingCoeff=0.9171;MQ=71.93;MQ0=0;MQRankSum=1.686;QD=27.54;ReadPosRankSum=-1.350;VQSLOD=5.0476;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:39.05:0,39,372	0/0:10,0:10:15.09:0,15,246	0/0:13,0:14:10.52:0,11,180	0/0:10,0:9:19.57:0,20,170	0/0:35,0:35:90.13:0,90,869	0/0:24,0:24:66.09:0,66,631	0/0:12,0:12:36.06:0,36,348	1/1:4,20:24:60.17:713,60,0	0/1:17,2:19:21.43:21,0,368	1/1:1,27:28:81.24:966,81,0	1/1:1,23:24:66.03:745,66,0	1/1:1,14:15:39.12:471,39,0	1/1:3,18:21:48.15:580,48,0	1/1:2,19:21:48.15:580,48,0	0/0:17,0:17:45.04:0,45,423	1/1:3,16:19:42.13:507,42,0	1/1:4,18:22:45.14:544,45,0	1/1:2,15:17:42.13:507,42,0	1/1:5,16:21:48.10:552,48,0	1/1:1,22:23:34.15:662,34,0	1/1:1,8:9:18.06:217,18,0	1/1:1,22:23:66.03:758,66,0	1/1:4,23:27:66.20:797,66,0	1/1:2,6:7:18.06:217,18,0	0/0:21,0:21:51.08:0,51,492	0/0:27,0:27:75.12:0,75,724	0/0:31,0:31:90.12:0,90,858	0/0:26,0:26:78.11:0,78,747
chr10	19842161	.	AG	A	661.94	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.348;DP=477;FS=7.850;HRun=1;HaplotypeScore=53.5466;InbreedingCoeff=0.9927;MQ=92.74;MQ0=0;MQRankSum=-0.715;QD=26.48;ReadPosRankSum=-2.977;VQSLOD=2.0599;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:57.19:0,57,908	0/0:9,0:9:27.09:0,27,431	0/0:23,0:23:69.23:0,69,1079	0/0:18,0:18:51.13:0,51,748	0/0:12,0:12:30.04:0,30,427	0/0:16,0:15:45.12:0,45,671	0/0:20,0:20:60.20:0,60,936	1/1:1,24:25:57.14:757,57,0	0/0:16,0:16:48.16:0,48,749	0/0:19,0:19:45.15:0,45,698	0/0:11,0:11:30.09:0,30,455	0/0:19,0:19:57.18:0,57,884	0/0:24,0:24:69.20:0,69,1051	0/0:18,0:18:54.18:0,54,838	0/0:19,0:19:57.16:0,57,863	0/0:26,0:26:78.24:0,78,1196	0/0:17,0:17:48.11:0,48,697	0/0:18,0:18:54.10:0,54,831	0/0:17,0:17:51.11:0,51,742	0/0:7,0:7:21.05:0,21,304	0/0:16,0:16:45.15:0,45,714	0/0:12,0:12:30.10:0,30,478	0/0:16,0:16:36:0,36,516	0/0:14,0:14:39.11:0,39,597	0/0:13,0:13:30.10:0,30,479	0/0:15,0:15:42.14:0,42,671	0/0:18,0:18:54.16:0,54,818	0/0:16,0:16:48.11:0,48,673
chr10	19842374	.	G	GA	4634.06	PASS	AB=0.693;AC=27;AF=0.482;AN=56;BaseQRankSum=-13.121;DP=458;FS=7.787;HRun=10;HaplotypeScore=59.8938;InbreedingCoeff=0.8010;MQ=71.04;MQ0=0;MQRankSum=-1.919;QD=20.15;ReadPosRankSum=-0.359;VQSLOD=5.5414;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:44.86:0,45,369	0/0:7,0:7:20.98:0,21,172	0/0:7,0:7:14.97:0,15,123	0/0:12,0:11:18.99:0,19,125	0/0:17,0:17:44.95:0,45,369	0/0:17,0:16:41.93:0,42,345	0/0:11,0:11:29.93:0,30,240	0/0:37,2:39:30.71:0,31,457	0/0:19,0:19:50.94:0,51,419	1/1:2,11:13:33.08:350,33,0	1/1:4,21:27:44.12:619,44,0	1/1:4,6:11:23.71:215,24,0	1/1:0,14:14:33.08:352,33,0	1/1:1,15:16:42.11:448,42,0	0/0:13,0:12:32.95:0,33,271	0/1:4,10:14:0.58:200,0,1	1/1:3,16:19:26.49:487,26,0	1/1:7,9:16:23.71:256,24,0	0/1:6,16:22:16.80:447,0,17	1/1:0,13:13:39.07:404,39,0	1/1:2,9:13:29.78:285,30,0	1/1:3,8:11:21.01:212,21,0	1/1:4,13:17:30.55:321,31,0	1/1:1,1:2:3.01:32,3,0	0/0:21,0:21:53.92:0,54,443	0/1:19,2:22:7.87:8,0,344	0/0:23,0:23:30.48:0,30,395	0/0:23,0:23:53.51:0,54,459
chr10	19842950	.	ATATATATATATATAT	A	269.77	PASS	AB=1.000;AC=15;AF=0.357;AN=42;BaseQRankSum=2.426;DP=95;FS=7.795;HRun=0;HaplotypeScore=53.5629;InbreedingCoeff=0.2542;MQ=58.93;MQ0=5;MQRankSum=-0.613;QD=6.58;ReadPosRankSum=-1.369;VQSLOD=-0.1019;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,6:10:6.38:124,6,0	./.	0/0:3,0:1:2.04:0,2,6	0/0:9,0:3:8.38:0,8,92	0/0:3,0:3:3.01:0,3,32	1/1:1,0:1:0.89:2,1,0	0/0:2,0:2:0.08:0,0,12	1/1:12,0:11:26.52:112,27,0	1/1:1,0:1:1.25:3,1,0	0/0:2,0:2:6.01:0,6,82	0/0:1,0:1:3:0,3,26	./.	0/0:1,0:1:1.82:0,2,5	./.	./.	0/0:1,0:1:2.99:0,3,24	0/0:17,0:16:44.30:0,44,1877	0/0:11,0:10:19.31:0,19,724	0/0:1,0:1:3.01:0,3,139	./.	./.	./.	1/1:1,0:1:0.47:1,0,0	0/0:2,0:2:6.01:0,6,231	0/1:5,0:5:40.01:46,0,40	0/1:3,0:3:23.56:29,0,24	1/1:1,0:1:2.94:18,3,0	0/1:6,0:6:6.25:56,0,6
chr10	19842964	.	ATTTTTTT	A	754.82	PASS	AC=2;AF=0.037;AN=54;BaseQRankSum=-1.484;DP=118;FS=5.084;HRun=10;HaplotypeScore=37.2878;InbreedingCoeff=0.2117;MQ=59.34;MQ0=2;MQRankSum=-1.799;QD=47.18;ReadPosRankSum=1.843;VQSLOD=0.4333;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:7:5.98:0,6,83	0/0:0,0:3:9.03:0,9,165	0/0:2,0:1:3.01:0,3,57	0/0:8,0:2:6.01:0,6,101	0/0:0,0:7:18.06:0,18,247	./.	0/0:4,0:4:12.04:0,12,341	1/1:2,14:15:42.05:847,42,0	0/0:3,0:3:9.03:0,9,233	0/0:2,0:2:6.02:0,6,218	0/0:4,0:4:12.04:0,12,355	0/0:1,0:1:3.01:0,3,61	0/0:1,0:1:3.01:0,3,36	0/0:5,0:5:15.05:0,15,368	0/0:2,0:1:3.01:0,3,81	0/0:1,0:1:2.68:0,3,11	0/0:18,0:17:38.42:0,38,1121	0/0:11,0:10:24.08:0,24,638	0/0:3,0:3:9.03:0,9,307	0/0:1,0:1:3.01:0,3,60	0/0:1,0:1:3.01:0,3,109	0/0:2,0:2:6.02:0,6,171	0/0:2,0:2:6.02:0,6,190	0/0:2,0:2:6.02:0,6,194	0/0:0,0:2:6.02:0,6,115	0/0:3,0:3:9:0,9,115	0/0:1,0:2:6.02:0,6,118	0/0:0,0:3:9.03:0,9,153
chr10	19843324	.	TA	T	9985.32	PASS	AB=0.941;AC=45;AF=0.804;AN=56;BaseQRankSum=8.655;DP=613;FS=10.636;HRun=10;HaplotypeScore=62.6841;InbreedingCoeff=0.8903;MQ=76.62;MQ0=0;MQRankSum=-2.896;QD=19.62;ReadPosRankSum=3.384;VQSLOD=5.3385;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,31:35:92.98:807,93,0	1/1:0,8:8:20.99:182,21,0	0/0:12,0:11:18.16:0,18,204	0/1:15,1:15:2.01:2,0,192	1/1:6,22:28:62.18:528,62,0	0/0:29,1:30:55.11:0,55,814	0/0:15,0:15:39.11:0,39,431	1/1:7,26:33:74.92:641,75,0	0/0:26,2:28:11.06:0,11,578	1/1:3,22:25:51.11:551,51,0	1/1:3,26:29:47.90:637,48,0	1/1:2,13:15:32.99:287,33,0	1/1:6,22:28:10.22:465,10,0	1/1:2,21:24:56.02:475,56,0	0/0:19,0:19:54.03:0,54,573	1/1:5,15:20:5.80:279,6,0	1/1:2,24:26:62.99:547,63,0	1/1:2,21:23:56.99:495,57,0	1/1:1,9:10:26.99:234,27,0	1/1:1,19:20:44.89:381,45,0	1/1:1,17:18:44.99:391,45,0	1/1:3,28:31:71.91:618,72,0	1/1:2,16:18:41.99:365,42,0	1/1:1,16:17:44.99:391,45,0	1/1:2,15:17:35.99:313,36,0	1/1:7,20:27:68.94:589,69,0	1/1:1,28:29:65.98:573,66,0	1/1:3,9:12:26.99:234,27,0
chr10	19844841	.	CA	C	17757.93	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=7.868;DP=587;FS=3.059;HRun=2;HaplotypeScore=58.3817;InbreedingCoeff=0.9875;MQ=72.99;MQ0=0;MQRankSum=-4.473;QD=36.24;ReadPosRankSum=4.255;VQSLOD=5.3838;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,35:36:99:1285,99,0	1/1:0,10:10:30.10:389,30,0	0/0:18,0:18:54.18:0,54,766	0/0:14,0:14:33.11:0,33,471	1/1:0,33:33:96.27:1223,96,0	0/0:15,0:15:45.14:0,45,642	0/0:14,0:14:39.11:0,39,546	1/1:0,35:35:99:1347,105,0	0/0:10,0:10:30.10:0,30,449	1/1:0,23:23:69.18:863,69,0	1/1:0,26:26:75.24:973,75,0	1/1:0,9:9:21.07:273,21,0	1/1:0,30:30:84.27:1090,84,0	1/1:0,16:16:45.15:584,45,0	0/0:26,0:26:78.26:0,78,1167	1/1:1,18:19:9.27:617,9,0	1/1:0,25:25:66.21:856,66,0	1/1:0,10:10:27.09:350,27,0	1/1:0,24:24:72.21:902,72,0	1/1:0,30:30:90.25:1148,90,0	1/1:0,20:20:54.18:701,54,0	1/1:0,15:15:45.15:584,45,0	1/1:0,24:24:63.20:818,63,0	1/1:0,22:22:63.20:818,63,0	1/1:0,19:19:51.17:662,51,0	1/1:0,18:18:54.15:684,54,0	1/1:2,34:36:93.30:1202,93,0	1/1:0,10:10:30.10:389,30,0
chr10	19845887	.	CA	C	14741.33	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=12.394;DP=542;FS=9.593;HRun=3;HaplotypeScore=95.6213;InbreedingCoeff=0.9978;MQ=85.66;MQ0=0;MQRankSum=-4.995;QD=34.77;ReadPosRankSum=3.336;VQSLOD=4.8005;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,28:28:84.26:1041,84,0	1/1:1,8:9:24.08:297,24,0	0/0:14,0:14:42.03:0,42,565	0/0:23,0:23:60.16:0,60,817	1/1:1,25:26:65.99:805,66,0	0/0:26,0:26:78.26:0,78,1123	0/0:13,0:13:36.10:0,36,499	1/1:1,29:30:84.23:1004,84,0	0/0:16,0:16:48.16:0,48,691	1/1:1,32:33:96.27:1163,96,0	1/1:0,14:14:36.11:443,36,0	1/1:0,16:16:48.15:595,48,0	1/1:1,21:22:63.20:781,63,0	1/1:1,24:25:69.22:855,69,0	0/0:26,0:26:78.25:0,78,1105	1/1:0,19:19:54.17:670,54,0	1/1:0,19:19:57.18:707,57,0	1/1:1,6:7:18.06:223,18,0	1/1:1,18:19:54.17:670,54,0	1/1:0,13:13:39.12:483,39,0	1/1:0,23:23:63.20:781,63,0	1/1:0,14:14:42.13:518,42,0	1/1:1,15:16:42.03:520,42,0	1/1:0,12:12:36.11:446,36,0	1/1:0,18:18:51.16:632,51,0	1/1:1,17:18:51.14:618,51,0	1/1:1,29:30:81.12:1004,81,0	1/1:0,13:13:39.12:483,39,0
chr10	19846108	.	GAA	G	3075.83	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=9.182;DP=483;FS=3.140;HRun=11;HaplotypeScore=81.7657;InbreedingCoeff=0.8958;MQ=71.00;MQ0=0;MQRankSum=1.383;QD=20.51;ReadPosRankSum=1.963;VQSLOD=3.2916;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,23:24:57.11:605,57,0	1/1:0,10:10:30.07:318,30,0	0/0:21,0:18:16.12:0,16,234	0/1:15,0:14:11.67:12,0,252	1/1:3,26:29:64.21:756,64,0	0/0:17,0:21:48.14:0,48,683	0/0:18,0:18:48.12:0,48,692	0/0:4,0:23:51.05:0,51,190	0/0:8,0:8:12.01:0,12,159	0/0:24,0:25:57.19:0,57,860	0/0:21,0:21:51.14:0,51,700	0/0:20,0:20:54.18:0,54,815	0/0:11,0:11:27.06:0,27,390	0/0:19,0:19:45.08:0,45,623	0/0:13,0:13:36.09:0,36,529	0/0:10,0:10:27.09:0,27,415	0/0:18,0:18:51.13:0,51,759	0/0:11,0:11:30.10:0,30,462	0/0:14,0:14:33.10:0,33,485	0/0:19,0:20:48.12:0,48,677	0/0:10,0:12:36.07:0,36,456	0/0:13,0:13:27.08:0,27,378	0/0:21,0:21:51.13:0,51,704	0/0:13,0:13:39.13:0,39,600	1/1:5,20:25:51.11:543,51,0	1/1:2,15:17:45.09:465,45,0	1/1:4,19:23:45.09:479,45,0	1/1:1,6:7:9.02:96,9,0
chr10	19849208	.	T	TAAAA	6502.07	PASS	AB=0.771;AC=27;AF=0.482;AN=56;BaseQRankSum=-6.112;DP=464;FS=42.983;HRun=10;HaplotypeScore=82.5303;InbreedingCoeff=0.5813;MQ=54.98;MQ0=1;MQRankSum=0.592;QD=24.54;ReadPosRankSum=-1.542;VQSLOD=-0.0717;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:39:92.43:0,92,1040	0/0:4,0:4:9.01:0,9,127	0/0:11,0:6:0.38:0,0,80	0/1:6,0:5:36.74:37,0,46	0/0:18,0:21:32.85:0,33,375	0/0:13,0:13:33.03:0,33,461	0/0:12,0:12:27.01:0,27,374	0/1:6,0:24:7.70:8,0,22	0/0:15,0:15:35.07:0,35,537	1/1:7,13:28:48.12:897,48,0	1/1:3,12:16:32.91:477,33,0	1/1:5,6:12:12.04:233,12,0	1/1:3,7:12:12.04:249,12,0	1/1:3,13:19:32.82:692,33,0	0/0:12,0:12:27.02:0,27,381	0/1:10,6:37:99:576,0,272	0/1:11,9:31:99:896,0,108	0/1:6,6:17:89.13:323,0,89	1/1:8,9:18:30.06:557,30,0	1/1:1,10:11:30.05:593,30,0	1/1:1,9:11:12:232,12,0	1/1:0,3:3:9.03:212,9,0	1/1:0,7:8:12.04:233,12,0	1/1:1,7:12:15.05:286,15,0	0/0:14,0:15:36.07:0,36,468	0/0:22,0:22:60.14:0,60,833	0/0:27,0:27:60.09:0,60,817	0/0:7,0:7:14.99:0,15,210
chr10	19849346	.	GAT	G	1710.08	PASS	AB=0.742;AC=5;AF=0.089;AN=56;BaseQRankSum=8.818;DP=531;FS=6.108;HRun=0;HaplotypeScore=62.5938;InbreedingCoeff=-0.1010;MQ=68.07;MQ0=1;MQRankSum=-2.351;QD=10.62;ReadPosRankSum=0.456;VQSLOD=2.0788;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:30,16:45:99:469,0,1222	0/0:10,0:10:27.09:0,27,485	0/0:16,0:16:42.12:0,42,693	0/0:9,0:8:18.06:0,18,312	0/1:20,10:30:99:341,0,755	0/0:11,0:11:33.09:0,33,562	0/0:21,0:21:57.18:0,57,996	0/0:26,0:25:69.21:0,69,1161	0/0:14,0:14:36.12:0,36,642	0/0:25,0:25:75.25:0,75,1311	0/0:17,0:17:48.16:0,48,861	0/0:11,0:11:30.10:0,30,540	0/0:11,0:11:33.11:0,33,594	0/0:18,0:18:54.19:0,54,970	0/0:16,0:16:48.15:0,48,809	0/1:20,11:30:99:332,0,938	0/1:18,16:33:99:536,0,764	0/1:15,5:20:99:149,0,734	0/0:25,0:25:69.22:0,69,1202	0/0:19,0:19:54.19:0,54,970	0/0:25,0:25:69.24:0,69,1242	0/0:3,0:3:9.03:0,9,161	0/0:15,0:14:24.08:0,24,432	0/0:14,0:14:36.09:0,36,587	0/0:14,0:14:30.10:0,30,540	0/0:16,0:16:48.16:0,48,864	0/0:20,0:20:54.19:0,54,969	0/0:14,0:14:42.14:0,42,737
chr10	19849433	.	G	GA	1365.53	PASS	AB=0.853;AC=30;AF=0.556;AN=54;BaseQRankSum=1.089;DP=446;FS=8.826;HRun=15;HaplotypeScore=96.6536;InbreedingCoeff=-0.1072;MQ=41.42;MQ0=27;MQRankSum=-1.710;QD=3.47;ReadPosRankSum=-4.410;VQSLOD=-0.7488;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:25,1:24:14.83:64,0,15	0/1:3,0:3:0:0,0,0	0/1:17,0:1:0:0,0,0	./.	0/1:26,0:26:6.62:58,0,7	0/0:5,0:7:9.95:0,10,29	0/0:7,0:11:6.10:0,6,18	1/1:17,0:15:17.65:117,18,0	0/0:5,0:12:6.07:0,6,18	0/1:11,10:22:30.30:77,0,30	0/1:20,2:20:24.36:119,0,24	0/1:9,0:9:15.14:57,0,15	0/1:15,0:13:16.52:72,0,17	0/1:9,4:13:16.68:17,0,20	0/0:8,0:8:4.18:0,4,13	0/1:22,2:24:7.10:42,0,7	1/1:28,1:29:1.18:90,1,0	1/1:23,1:23:16.63:172,17,0	0/1:16,3:19:17.57:160,0,18	0/1:11,5:19:34.10:71,0,34	1/1:12,0:9:3.47:26,3,0	0/1:1,5:6:0:0,0,0	0/1:5,3:8:1.36:20,0,1	0/1:5,11:15:12.01:19,0,12	1/1:10,1:11:14.86:76,15,0	1/1:13,2:15:14.43:85,14,0	0/1:18,1:18:1.23:113,0,1	1/1:15,1:10:1.43:54,1,0
chr10	19849447	.	AAG	A	558.95	PASS	AB=0.951;AC=10;AF=0.179;AN=56;BaseQRankSum=7.537;DP=490;FS=3.582;HRun=0;HaplotypeScore=91.5395;InbreedingCoeff=-0.2143;MQ=44.16;MQ0=30;MQRankSum=-3.817;QD=2.62;ReadPosRankSum=-2.466;VQSLOD=1.6781;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:24,3:25:99:153,0,137	0/0:3,0:3:8.67:0,9,48	0/1:37,0:6:8.15:19,0,8	0/0:27,0:6:1.87:0,2,42	0/1:25,1:25:49.43:49,0,141	0/0:11,0:10:5.28:0,5,115	0/0:15,0:13:19.70:0,20,137	0/0:19,0:17:5.60:0,6,94	0/1:10,0:9:8.53:9,0,50	0/0:24,0:24:62.64:0,63,680	0/0:23,0:21:59.57:0,60,599	0/0:9,0:10:23.82:0,24,250	0/0:11,0:10:30.06:0,30,357	0/0:9,0:9:15.03:0,15,181	0/1:10,0:10:6.49:6,0,148	0/1:12,6:17:74.02:237,0,74	0/1:28,2:27:99:113,0,378	0/1:25,1:25:91.72:92,0,460	0/0:28,0:27:64.64:0,65,726	0/0:18,0:18:24.78:0,25,491	0/0:13,0:11:18.11:0,18,149	0/0:6,0:5:6.02:0,6,82	0/0:10,0:10:15.05:0,15,116	0/0:17,0:16:14.65:0,15,166	0/0:12,0:12:5.21:0,5,89	0/1:16,0:16:4.23:4,0,112	0/0:21,0:19:18.68:0,19,230	0/1:13,0:10:10.22:10,0,178
chr10	19849450	.	GA	G	1529.65	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=11.244;DP=493;FS=3.453;HRun=11;HaplotypeScore=80.6008;InbreedingCoeff=0.6028;MQ=46.08;MQ0=31;MQRankSum=-6.910;QD=7.32;ReadPosRankSum=1.315;VQSLOD=2.5409;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:22,4:25:40.38:270,40,0	1/1:1,1:2:1.43:22,1,0	0/0:39,0:7:0.36:0,0,49	0/0:31,0:7:3.95:0,4,44	1/1:13,12:24:42.54:341,43,0	0/0:10,0:9:23.58:0,24,199	0/0:14,0:13:26.74:0,27,236	1/1:5,12:15:33.47:263,33,0	0/0:10,0:9:9.87:0,10,83	0/0:22,0:22:21.51:0,22,369	0/0:22,0:22:20.35:0,20,352	0/0:10,0:10:17.93:0,18,148	0/0:11,0:10:21.56:0,22,184	0/0:8,0:8:6.02:0,6,64	0/0:12,0:12:27.12:0,27,255	0/1:19,0:18:53.58:54,0,72	0/1:32,0:29:23.78:24,0,340	0/1:27,0:26:24.59:25,0,270	0/0:28,0:28:52.63:0,53,486	0/0:18,0:18:8.34:0,8,334	0/0:11,0:9:11.26:0,11,86	0/0:8,0:7:10.55:0,11,85	0/0:9,0:9:13.94:0,14,130	0/0:17,0:16:15.03:0,15,156	1/1:6,4:11:8.10:104,8,0	1/1:9,7:16:17.07:217,17,0	1/1:14,8:20:40.06:330,40,0	1/1:10,1:9:11.46:75,11,0
chr10	19849462	.	G	GA	688.34	PASS	AB=0.980;AC=9;AF=0.161;AN=56;BaseQRankSum=6.940;DP=500;FS=2.147;HRun=11;HaplotypeScore=90.4159;InbreedingCoeff=0.3567;MQ=52.09;MQ0=21;MQRankSum=-7.120;QD=4.20;ReadPosRankSum=-0.662;VQSLOD=1.3498;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:29,1:29:23.65:246,24,0	0/0:4,0:4:0.60:0,1,3	0/0:36,0:7:17.94:0,18,151	0/0:34,0:11:3.81:0,4,71	1/1:29,0:28:3.81:118,4,0	0/0:8,0:8:18.01:0,18,165	0/0:18,0:17:10.49:0,10,227	0/1:20,0:19:0.48:15,0,0	0/0:9,0:8:9:0,9,82	0/0:19,0:19:41.95:0,42,379	0/0:24,0:23:14.04:0,14,383	0/0:11,0:11:17.98:0,18,159	0/0:11,0:11:17.98:0,18,164	0/0:12,0:12:20.96:0,21,186	0/0:13,0:13:26.91:0,27,247	0/1:18,0:17:52.60:153,0,53	0/1:27,2:27:99:103,0,322	0/1:25,1:26:99:187,0,147	0/0:26,0:25:35.74:0,36,396	0/0:18,0:18:48:0,48,436	0/0:8,0:7:8.94:0,9,74	0/0:9,0:8:14.99:0,15,137	0/0:13,0:13:21:0,21,192	0/0:17,0:17:14.99:0,15,137	0/1:12,0:12:0.54:1,0,2	0/0:18,0:18:6.59:0,7,13	0/0:21,0:20:3.24:0,3,9	0/0:5,0:5:0.30:0,0,1
chr10	19849470	.	AGAT	A	5030.68	PASS	AB=0.668;AC=14;AF=0.250;AN=56;BaseQRankSum=6.249;DP=438;FS=8.248;HRun=0;HaplotypeScore=82.9843;InbreedingCoeff=0.7750;MQ=60.86;MQ0=8;MQRankSum=-7.565;QD=37.82;ReadPosRankSum=-0.035;VQSLOD=5.4027;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:18,10:27:99:632,0,380	1/1:0,4:4:12.04:217,12,0	0/0:27,0:9:24.07:0,24,435	0/0:29,0:13:24.92:0,25,369	0/1:9,17:26:99:921,0,116	0/0:6,0:6:18.06:0,18,414	0/0:17,0:17:42.14:0,42,845	1/1:0,19:19:57.18:953,57,0	0/0:7,0:6:9.03:0,9,175	0/0:18,0:18:48.14:0,48,1051	0/0:25,0:24:33.53:0,34,1193	0/0:9,0:9:24.08:0,24,496	0/0:9,0:9:18.04:0,18,372	0/0:11,0:11:24.08:0,24,527	0/0:12,0:12:33.11:0,33,699	0/0:16,0:14:39.11:0,39,654	0/0:27,0:26:61.76:0,62,1254	0/0:20,0:20:51.17:0,51,887	0/0:18,0:18:51.17:0,51,1120	0/0:20,0:20:57.20:0,57,1207	0/0:6,0:6:12.04:0,12,256	0/0:7,0:7:18.06:0,18,394	0/0:9,0:9:21.07:0,21,472	0/0:12,0:12:18.06:0,18,380	1/1:0,12:12:24.08:445,24,0	1/1:0,14:14:42.14:759,42,0	1/1:0,20:19:48.16:881,48,0	1/1:0,8:8:12.04:223,12,0
chr10	19849482	.	GA	G	636.25	PASS	AB=0.754;AC=5;AF=0.089;AN=56;BaseQRankSum=4.855;DP=438;FS=2.885;HRun=8;HaplotypeScore=83.5541;InbreedingCoeff=-0.1114;MQ=66.41;MQ0=2;MQRankSum=-5.015;QD=5.22;ReadPosRankSum=0.402;VQSLOD=0.5127;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:18,11:29:99:237,0,455	0/0:4,0:4:11.54:0,12,100	0/0:17,0:9:5.20:0,5,91	0/0:23,0:14:12.74:0,13,140	0/1:22,6:28:75.44:75,0,466	0/0:5,0:5:15.05:0,15,181	0/0:16,0:16:39.07:0,39,454	0/0:23,0:22:57.12:0,57,659	0/0:3,0:3:8.96:0,9,90	0/0:20,0:20:48.12:0,48,551	0/0:22,0:22:51.15:0,51,606	0/0:11,0:11:30.02:0,30,333	0/0:6,0:6:18.06:0,18,217	0/0:9,0:9:24.07:0,24,290	0/0:14,0:14:36.06:0,36,422	0/1:8,8:14:99:151,0,194	0/1:20,7:27:99:148,0,508	0/1:15,7:22:99:142,0,382	0/0:17,0:17:16.26:0,16,387	0/0:21,0:21:60.18:0,60,724	0/0:6,0:6:12.04:0,12,145	0/0:9,0:9:27.08:0,27,326	0/0:11,0:11:24.07:0,24,290	0/0:10,0:10:21.06:0,21,254	0/0:12,0:12:26.99:0,27,297	0/0:16,0:16:39.10:0,39,449	0/0:26,0:25:66.19:0,66,785	0/0:15,0:15:26.97:0,27,292
chr10	19849696	.	GA	G	3034.39	PASS	AB=0.747;AC=28;AF=0.500;AN=56;BaseQRankSum=1.972;DP=540;FS=6.506;HRun=13;HaplotypeScore=90.2917;InbreedingCoeff=0.4931;MQ=53.61;MQ0=16;MQRankSum=1.521;QD=7.94;ReadPosRankSum=5.994;VQSLOD=2.6697;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:21,1:41:9.82:10,0,223	0/0:6,0:8:11.73:0,12,74	0/0:7,0:3:8.83:0,9,61	0/0:6,1:5:11.96:0,12,99	0/0:8,0:20:20.78:0,21,125	0/1:11,1:11:1.58:2,0,114	0/1:14,2:16:4.82:5,0,269	0/0:17,1:20:26.12:0,26,317	0/0:12,0:12:26.88:0,27,222	1/1:2,12:14:34.52:230,35,0	1/1:2,10:12:26.82:197,27,0	1/1:8,11:19:9.23:218,9,0	0/1:5,7:13:28.62:74,0,29	1/1:5,10:15:27.90:187,28,0	0/0:14,0:14:21.02:0,21,199	1/1:7,18:29:27.79:313,28,0	1/1:16,9:29:27.26:293,27,0	0/1:14,15:33:94.39:278,0,94	1/1:8,19:28:58.54:411,59,0	1/1:6,13:20:31.77:224,32,0	1/1:6,12:21:35.36:235,35,0	0/1:1,6:7:11.67:54,0,12	1/1:3,11:15:28.35:202,28,0	0/1:12,16:28:2.89:299,0,3	0/1:6,1:15:4.54:5,0,69	0/0:8,1:18:18.85:0,19,217	0/0:11,1:32:15.23:0,15,168	0/0:6,1:14:9.76:0,10,131
chr10	19850811	.	TTGG	T	7550.88	PASS	AC=44;AF=0.815;AN=54;BaseQRankSum=7.778;DP=615;FS=0.000;HRun=0;HaplotypeScore=139.1366;InbreedingCoeff=0.9166;MQ=67.91;MQ0=9;MQRankSum=-2.296;QD=15.44;ReadPosRankSum=1.739;VQSLOD=4.4546;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:34:17.86:126,18,0	1/1:3,0:19:38.69:273,39,0	./.	0/0:33,0:23:11.93:0,12,185	1/1:12,0:27:26.78:189,27,0	0/0:18,0:18:27.08:0,27,481	0/0:23,0:23:36.99:0,37,633	1/1:17,0:28:2.88:15,3,0	0/0:12,0:12:24.08:0,24,460	1/1:10,16:26:50.90:671,51,0	1/1:9,4:15:15.02:186,15,0	1/1:7,15:22:44.31:616,44,0	1/1:7,8:15:21.07:288,21,0	1/1:5,18:23:54.18:741,54,0	0/0:11,0:11:30.09:0,30,552	1/1:4,14:18:42:551,42,0	1/1:12,19:30:51.17:693,51,0	1/1:1,6:7:9.03:124,9,0	1/1:11,4:14:12.01:165,12,0	1/1:18,6:24:21.07:288,21,0	1/1:21,18:39:42.14:576,42,0	1/1:8,9:16:24.08:329,24,0	1/1:11,8:19:20.85:288,21,0	1/1:5,17:22:48.16:659,48,0	1/1:7,0:20:32.36:220,32,0	1/1:14,0:37:38.60:268,39,0	1/1:7,0:24:31.37:209,31,0	1/1:0,0:6:11.83:79,12,0
chr10	19855100	.	CAA	C	6106.13	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=17.363;DP=652;FS=1.103;HRun=3;HaplotypeScore=88.8565;InbreedingCoeff=0.9881;MQ=88.18;MQ0=0;MQRankSum=-5.558;QD=34.50;ReadPosRankSum=1.274;VQSLOD=4.6126;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,54:55:99:1737,126,0	1/1:0,13:13:39.06:549,39,0	0/0:25,0:25:72.16:0,72,1179	0/0:24,0:24:69.22:0,69,1264	1/1:0,17:17:27.09:391,27,0	0/0:22,0:22:63.22:0,63,1210	0/0:20,0:20:60.19:0,60,1118	1/1:2,25:27:69.67:955,70,0	0/0:18,0:18:54.18:0,54,998	0/0:26,0:26:75.24:0,75,1411	0/0:24,0:24:72.20:0,72,1346	0/0:28,0:28:81.28:0,81,1546	0/0:12,0:12:30.10:0,30,580	0/0:36,0:36:99:0,105,1994	0/0:21,0:21:60.20:0,60,1128	0/0:22,0:22:66.22:0,66,1244	0/0:31,0:31:93.30:0,93,1726	0/0:27,0:27:81.23:0,81,1481	0/0:14,0:14:39.12:0,39,691	0/0:20,0:20:60.20:0,60,1126	0/0:28,0:28:78.27:0,78,1506	0/0:30,0:30:90.31:0,90,1734	0/0:18,0:18:51.16:0,51,923	0/0:29,0:29:84.28:0,84,1582	1/1:0,11:11:30.02:417,30,0	1/1:1,21:22:8.21:825,8,0	1/1:1,18:19:45.15:662,45,0	1/1:0,13:13:39.13:571,39,0
chr10	19855244	.	CA	C	1167.39	PASS	AB=1.000;AC=12;AF=0.214;AN=56;BaseQRankSum=15.899;DP=663;FS=4.796;HRun=1;HaplotypeScore=82.4994;InbreedingCoeff=0.8312;MQ=77.72;MQ0=0;MQRankSum=-2.788;QD=7.08;ReadPosRankSum=2.568;VQSLOD=1.0052;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:60,3:63:21.33:446,21,0	1/1:12,0:12:28.84:127,29,0	0/0:12,0:12:33.11:0,33,476	0/0:17,1:18:13.49:0,13,433	0/1:18,0:18:6.82:122,0,7	0/0:17,0:17:51.15:0,51,740	0/0:24,0:24:72.23:0,72,1056	0/0:42,0:42:99:0,111,1520	0/0:29,0:29:87.26:0,87,1245	0/0:21,0:21:51.16:0,51,757	0/0:22,0:22:59.95:0,60,823	0/0:17,0:17:48.15:0,48,695	0/0:27,0:27:78.20:0,78,1101	0/0:22,0:22:63.21:0,63,934	0/0:25,0:25:72.14:0,72,989	0/0:27,0:27:81.27:0,81,1203	0/0:29,0:29:87.23:0,87,1252	0/0:20,0:20:60.12:0,60,828	0/0:22,0:22:63.17:0,63,878	0/0:22,0:22:36.65:0,37,713	0/0:43,0:43:77.56:0,78,1402	0/0:19,0:19:50.15:0,50,697	0/0:16,0:16:38.17:0,38,527	0/0:24,0:24:69.20:0,69,990	1/1:20,1:21:54.32:245,54,0	1/1:19,0:19:17.69:144,18,0	1/1:24,0:24:55.86:211,56,0	0/1:8,0:8:4.49:54,0,4
chr10	19855245	.	AC	A	4717.92	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=12.589;DP=672;FS=6.151;HRun=5;HaplotypeScore=69.4121;InbreedingCoeff=0.9983;MQ=76.90;MQ0=0;MQRankSum=-2.017;QD=27.92;ReadPosRankSum=3.235;VQSLOD=5.1116;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,55:64:99:1608,144,0	1/1:0,12:12:33.09:374,33,0	0/0:11,0:11:30.10:0,30,405	0/0:18,0:18:35.35:0,35,430	1/1:1,18:19:42.11:472,42,0	0/0:16,0:16:48.16:0,48,656	0/0:25,0:25:72.22:0,72,957	0/0:41,0:41:99:0,99,1306	0/0:28,0:28:81.25:0,81,1077	0/0:21,0:21:60.08:0,60,739	0/0:23,0:23:63.19:0,63,826	0/0:17,0:17:48.15:0,48,641	0/0:28,0:28:81.23:0,81,1059	0/0:22,0:22:66.21:0,66,888	0/0:25,0:25:69.21:0,69,912	0/0:28,0:28:84.26:0,84,1119	0/0:31,0:31:90.26:0,90,1181	0/0:20,0:20:57.19:0,57,776	0/0:23,0:23:63.19:0,63,829	0/0:22,0:22:61.41:0,61,758	0/0:44,0:44:99:0,115,1465	0/0:20,0:20:57.16:0,57,727	0/0:16,0:16:45.10:0,45,563	0/0:24,0:24:66.22:0,66,902	1/1:2,20:22:64.97:707,65,0	1/1:4,16:20:54.15:604,54,0	1/1:0,24:24:66.06:749,66,0	1/1:1,7:8:18.05:204,18,0
chr10	19857924	.	CAT	C	2444.83	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=10.082;DP=572;FS=0.000;HRun=0;HaplotypeScore=74.5535;InbreedingCoeff=0.9816;MQ=79.08;MQ0=0;MQRankSum=-2.303;QD=38.81;ReadPosRankSum=1.605;VQSLOD=5.5018;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,108,2064	0/0:9,0:9:27.09:0,27,521	0/0:15,0:15:37.86:0,38,640	0/0:17,0:17:19.25:0,19,590	0/0:32,0:32:90.28:0,90,1699	1/1:0,22:22:63.21:963,63,0	1/1:0,9:9:27.09:413,27,0	0/0:24,0:24:72.24:0,72,1360	1/1:0,14:14:33.11:505,33,0	0/0:32,0:32:96.32:0,96,1818	0/0:18,0:18:48.16:0,48,926	0/0:18,0:18:51.17:0,51,974	0/0:27,0:27:78.27:0,78,1506	0/0:21,0:21:60.21:0,60,1150	1/1:1,17:18:48.16:724,48,0	0/0:15,0:15:45.15:0,45,869	0/0:20,0:20:60.21:0,60,1158	0/0:15,0:15:39.11:0,39,717	0/0:21,0:21:63.19:0,63,1145	0/0:29,0:29:81.23:0,81,1512	0/0:32,0:32:96.33:0,96,1833	0/0:18,0:18:51.16:0,51,952	0/0:25,0:25:69.24:0,69,1331	0/0:20,0:20:57.20:0,57,1092	0/0:16,0:16:45.15:0,45,868	0/0:23,0:23:66.22:0,66,1244	0/0:22,0:22:66.23:0,66,1274	0/0:3,0:3:9.03:0,9,174
chr10	19857990	.	G	GTAAAT	3999.29	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=12.335;DP=573;FS=1.036;HRun=0;HaplotypeScore=119.9759;InbreedingCoeff=0.9970;MQ=79.61;MQ0=0;MQRankSum=-10.702;QD=66.65;ReadPosRankSum=-0.721;VQSLOD=4.6413;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,138,3093	0/0:7,0:7:21.07:0,21,489	0/0:17,0:17:27.47:0,27,775	0/0:24,0:24:59.34:0,59,1240	0/0:29,0:29:87.29:0,87,1956	1/1:8,13:21:63:1352,63,0	1/1:3,6:9:27.01:588,27,0	0/0:28,0:28:75.25:0,75,1682	1/1:3,11:14:39.04:930,39,0	0/0:31,0:31:93.32:0,93,2086	0/0:13,0:13:33.05:0,33,712	0/0:14,0:14:42.14:0,42,960	0/0:24,0:24:72.25:0,72,1674	0/0:15,0:15:45.15:0,45,1005	1/1:4,12:16:48.03:1130,48,0	0/0:22,0:22:66.20:0,66,1407	0/0:16,0:16:48.16:0,48,1116	0/0:21,0:21:60.21:0,60,1398	0/0:21,0:21:60.17:0,60,1247	0/0:35,0:35:99:0,99,2169	0/0:28,0:28:81.28:0,81,1802	0/0:18,0:18:54.13:0,54,1144	0/0:23,0:23:66.21:0,66,1389	0/0:7,0:7:21.07:0,21,489	0/0:16,0:16:42.14:0,42,977	0/0:17,0:17:51.18:0,51,1182	0/0:27,0:27:81.28:0,81,1832	0/0:12,0:12:36.12:0,36,838
chr10	19857994	.	T	TACA	2208.95	PASS	AB=0.579;AC=5;AF=0.089;AN=56;BaseQRankSum=10.796;DP=575;FS=2.700;HRun=0;HaplotypeScore=103.0579;InbreedingCoeff=0.3274;MQ=79.45;MQ0=0;MQRankSum=-10.437;QD=38.75;ReadPosRankSum=2.192;VQSLOD=4.7901;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,138,2564	0/0:7,0:7:21.07:0,21,391	0/0:17,0:17:42.13:0,42,689	0/0:24,0:24:63.19:0,63,1079	0/0:31,0:31:93.27:0,93,1643	0/1:6,13:19:27.17:803,0,27	0/1:2,6:8:6.90:330,0,7	0/0:28,0:28:81.28:0,81,1499	1/1:3,11:14:5.80:571,6,0	0/0:35,0:35:99:0,102,1847	0/0:13,0:13:36.12:0,36,651	0/0:15,0:15:45.15:0,45,798	0/0:24,0:24:72.25:0,72,1339	0/0:15,0:15:45.15:0,45,839	0/1:4,11:16:43.84:620,0,44	0/0:19,0:19:57.20:0,57,1058	0/0:17,0:17:51.17:0,51,938	0/0:21,0:21:63.22:0,63,1160	0/0:20,0:20:57.20:0,57,1063	0/0:34,0:34:99:0,99,1797	0/0:28,0:28:81.26:0,81,1478	0/0:17,0:17:51.16:0,51,901	0/0:23,0:23:66.10:0,66,1120	0/0:8,0:8:24.08:0,24,435	0/0:16,0:16:48.16:0,48,866	0/0:19,0:19:57.19:0,57,1031	0/0:28,0:28:84.23:0,84,1500	0/0:12,0:12:36.12:0,36,671
chr10	19859149	.	CA	C	1525.98	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=8.346;DP=510;FS=1.115;HRun=8;HaplotypeScore=52.8126;InbreedingCoeff=0.8542;MQ=69.88;MQ0=0;MQRankSum=0.921;QD=18.84;ReadPosRankSum=1.002;VQSLOD=3.4305;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:84.24:0,84,1001	0/0:12,0:12:33.06:0,33,373	0/1:9,0:10:8.57:9,0,116	0/0:12,0:8:9.02:0,9,102	0/0:23,0:23:63.19:0,63,761	1/1:1,22:23:63.10:608,63,0	1/1:1,10:11:21.03:203,21,0	0/0:22,0:22:60.17:0,60,712	1/1:0,14:14:39.06:377,39,0	0/0:20,0:20:57.17:0,57,680	0/0:20,0:20:54.16:0,54,642	0/0:17,0:17:45.13:0,45,532	0/0:15,0:15:45.10:0,45,518	0/0:18,0:18:54.17:0,54,652	1/1:4,19:23:51.08:493,51,0	0/0:25,0:25:69.20:0,69,823	0/0:19,0:19:54.17:0,54,652	0/0:20,0:20:60.18:0,60,724	0/0:16,0:16:36.10:0,36,424	0/0:26,0:26:72.12:0,72,836	0/0:13,0:13:33.05:0,33,371	0/0:14,0:14:39.12:0,39,471	0/0:12,0:12:33.10:0,33,399	0/0:12,0:12:36.11:0,36,433	0/0:26,0:26:72.21:0,72,861	0/0:28,0:28:81.23:0,81,960	0/0:24,0:24:66.20:0,66,797	0/0:3,0:3:9.03:0,9,104
chr10	19859257	.	TGATTATAGCTCTAG	T	18007.62	PASS	AB=0.524;AC=27;AF=0.482;AN=56;BaseQRankSum=16.664;DP=573;FS=8.624;HRun=0;HaplotypeScore=232.4670;InbreedingCoeff=0.9195;MQ=88.36;MQ0=0;MQRankSum=-17.053;QD=78.64;ReadPosRankSum=4.646;VQSLOD=3.2174;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,123,8360	0/0:7,0:7:21.06:0,21,1088	0/0:21,0:21:60.19:0,60,3382	0/0:28,0:28:81.28:0,81,4509	0/0:26,0:25:78.27:0,78,4664	0/0:27,0:27:78.27:0,78,5148	0/0:26,0:26:78.27:0,78,5086	0/0:23,0:23:69.24:0,69,4402	0/0:21,0:21:63.20:0,63,4043	1/1:1,14:15:42.14:1731,42,0	1/1:2,14:16:27.09:1120,27,0	1/1:4,12:16:36.12:1528,36,0	1/1:2,16:19:42.14:1715,42,0	1/1:1,22:23:39.13:1663,39,0	0/0:25,0:25:75.26:0,75,5044	0/1:2,20:22:99:2122,0,158	1/1:0,13:13:27.09:1152,27,0	1/1:1,11:12:21.07:896,21,0	1/1:2,5:7:15.05:562,15,0	1/1:4,19:23:51.18:2010,51,0	1/1:3,16:19:15.05:640,15,0	1/1:3,10:13:27.09:1152,27,0	1/1:1,13:14:30.06:1171,30,0	1/1:2,15:17:14.45:546,14,0	0/0:30,0:30:90.31:0,90,5450	0/0:29,0:29:84.29:0,84,5594	0/0:33,0:33:93.30:0,93,5689	0/0:7,0:7:21.07:0,21,1379
chr10	19859716	.	T	TAC	3785.62	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=10.489;DP=695;FS=0.442;HRun=0;HaplotypeScore=91.3179;InbreedingCoeff=0.9969;MQ=77.30;MQ0=1;MQRankSum=-1.808;QD=42.54;ReadPosRankSum=1.722;VQSLOD=5.4154;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:93.23:0,93,1121	0/0:10,0:10:27.08:0,27,335	0/0:52,0:43:75.20:0,75,917	0/0:42,0:36:68.94:0,69,819	0/0:23,0:24:56.67:0,57,679	1/1:1,18:19:51.17:836,51,0	1/1:1,23:24:69.24:1130,69,0	0/0:35,0:35:69.21:0,69,845	1/1:4,20:24:57.19:935,57,0	0/0:25,0:25:60.19:0,60,744	0/0:18,0:18:36.10:0,36,446	0/0:19,0:19:48.13:0,48,581	0/0:24,0:24:66.21:0,66,818	0/0:17,0:17:45.10:0,45,541	1/1:3,19:22:54.18:884,54,0	0/0:20,0:20:57.16:0,57,692	0/0:28,0:28:69.20:0,69,841	0/0:29,0:29:81.25:0,81,1003	0/0:18,0:18:27.08:0,27,335	0/0:20,0:20:57.18:0,57,707	0/0:51,0:51:93.90:0,94,1428	0/0:14,0:14:27.08:0,27,335	0/0:24,0:24:60.19:0,60,744	0/0:30,0:30:72.23:0,72,893	0/0:18,0:18:51.12:0,51,615	0/0:20,0:20:60.19:0,60,744	0/0:19,0:19:42.13:0,42,520	0/0:8,0:8:18.06:0,18,223
chr10	19860203	.	GT	G	553.28	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.770;DP=634;FS=3.082;HRun=4;HaplotypeScore=61.7402;InbreedingCoeff=0.9982;MQ=89.49;MQ0=0;MQRankSum=-2.429;QD=30.74;ReadPosRankSum=-3.044;VQSLOD=2.7076;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,132,1812	0/0:11,0:11:33.11:0,33,462	0/0:26,0:25:58.86:0,59,782	0/0:25,0:25:49.05:0,49,661	0/0:24,0:24:66.20:0,66,892	0/0:24,0:23:60.20:0,60,840	0/0:25,0:25:75.24:0,75,1035	1/1:0,18:18:54.17:648,54,0	0/0:23,0:23:63.21:0,63,881	0/0:25,0:25:69.18:0,69,914	0/0:14,0:14:42.14:0,42,588	0/0:10,0:10:30.09:0,30,405	0/0:22,0:22:57.19:0,57,797	0/0:14,0:14:33.05:0,33,407	0/0:21,0:21:60.19:0,60,823	0/0:21,0:21:57.19:0,57,798	0/0:31,0:31:87.28:0,87,1200	0/0:16,0:16:48.10:0,48,631	0/0:11,0:11:33.11:0,33,462	0/0:23,0:23:69.23:0,69,966	0/0:28,0:28:81.27:0,81,1132	0/0:18,0:18:51.14:0,51,680	0/0:36,0:36:99:0,99,1354	0/0:33,0:33:90.24:0,90,1219	0/0:20,0:20:54.17:0,54,739	0/0:25,0:25:69.23:0,69,953	0/0:32,0:32:93.28:0,93,1267	0/0:11,0:11:30.10:0,30,420
chr10	19860347	.	GA	G	4450.29	PASS	AB=0.900;AC=25;AF=0.446;AN=56;BaseQRankSum=12.600;DP=543;FS=0.336;HRun=10;HaplotypeScore=60.8396;InbreedingCoeff=0.9362;MQ=76.89;MQ0=1;MQRankSum=-0.807;QD=16.42;ReadPosRankSum=0.231;VQSLOD=4.9830;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,36:38:99:912,105,0	1/1:1,9:10:26.99:234,27,0	0/0:20,0:18:32.85:0,33,318	0/0:11,0:10:15.19:0,15,128	1/1:7,27:34:71.92:617,72,0	1/1:0,18:18:53.99:469,54,0	1/1:1,22:23:62.99:547,63,0	1/1:3,15:18:44.98:391,45,0	1/1:0,16:16:35.99:313,36,0	0/0:23,0:23:51.14:0,51,564	0/0:18,1:19:28.12:0,28,538	0/0:20,0:20:54.12:0,54,582	0/0:22,0:22:63.16:0,63,689	0/1:16,2:18:4.04:4,0,401	1/1:1,17:18:41.84:364,42,0	0/0:23,0:23:60.16:0,60,664	0/0:25,0:25:69.14:0,69,741	0/0:10,0:10:27.07:0,27,299	0/0:13,0:13:36.09:0,36,390	0/0:12,1:13:10.02:0,10,324	0/0:14,0:14:33.09:0,33,365	0/0:17,0:17:33.79:0,34,505	0/0:25,0:25:69.17:0,69,752	0/0:16,0:16:39.11:0,39,431	1/1:0,14:15:35.03:293,35,0	1/1:3,0:29:53.98:163,54,0	1/1:4,0:24:34.63:102,35,0	1/1:0,0:10:14.26:42,14,0
chr10	19861569	.	T	TA	954.26	PASS	AC=10;AF=0.556;AN=18;BaseQRankSum=1.108;DP=427;FS=0.000;HRun=5;HaplotypeScore=31.8074;MQ=11.27;MQ0=349;MQRankSum=-0.850;QD=15.15;ReadPosRankSum=1.474;VQSLOD=1.7594;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	0/0:4,0:2:6.02:0,6,64	./.	./.	0/0:32,0:9:12.03:0,12,127	./.	./.	./.	./.	1/1:9,2:3:6.02:79,6,0	1/1:6,5:7:12.04:158,12,0	./.	./.	./.	./.	./.	./.	./.	./.	1/1:2,14:14:42.14:549,42,0	./.	1/1:10,3:4:9.03:118,9,0	1/1:8,4:7:12.04:157,12,0	./.	0/0:17,0:15:39.10:0,39,418	0/0:15,0:2:3.01:0,3,32	./.	./.
chr10	19862129	.	T	TA	2222.64	PASS	AB=0.556;AC=29;AF=0.518;AN=56;BaseQRankSum=-6.242;DP=160;FS=1.164;HRun=8;HaplotypeScore=17.3467;InbreedingCoeff=0.7506;MQ=53.89;MQ0=5;MQRankSum=2.687;QD=25.55;ReadPosRankSum=-0.047;VQSLOD=2.8745;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:5:15.01:0,15,137	0/0:1,0:1:3:0,3,27	0/0:1,0:1:2.98:0,3,22	0/0:3,0:4:4.29:0,4,16	0/0:9,0:9:27.01:0,27,247	0/0:4,0:4:9:0,9,82	0/0:6,0:5:1:0,1,96	1/1:4,12:13:36.11:415,36,0	0/0:5,0:5:15.01:0,15,137	1/1:1,5:4:12.04:138,12,0	1/1:0,3:3:6.02:69,6,0	1/1:0,5:4:12.04:138,12,0	1/1:0,6:6:18.05:208,18,0	1/1:0,5:5:15.04:173,15,0	0/0:8,0:8:24.01:0,24,220	1/1:0,7:5:15.04:173,15,0	0/1:1,4:5:7.67:123,0,8	1/1:1,5:6:18.05:208,18,0	1/1:1,5:6:15.04:173,15,0	1/1:1,4:5:12.04:138,12,0	1/1:1,6:7:18.01:193,18,0	1/1:0,4:3:9.03:104,9,0	1/1:0,3:3:9.03:104,9,0	1/1:0,3:3:6.02:69,6,0	0/0:6,0:6:18.01:0,18,164	0/0:12,0:12:36.02:0,36,329	0/0:9,0:9:27.01:0,27,247	0/0:3,0:3:9:0,9,82
chr10	19862340	.	CAGTAGTAGTAGT	C	3915.63	PASS	AB=0.794;AC=29;AF=0.690;AN=42;BaseQRankSum=3.402;DP=311;FS=14.138;HRun=0;HaplotypeScore=96.2481;InbreedingCoeff=0.1791;MQ=49.08;MQ0=20;MQRankSum=-4.521;QD=16.88;ReadPosRankSum=-1.948;VQSLOD=0.5300;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:17,2:23:18.06:350,18,0	1/1:2,1:3:3.01:103,3,0	1/1:6,0:2:0.89:2,1,0	./.	1/1:5,3:8:6.02:205,6,0	0/1:15,0:28:99:134,0,691	0/0:5,0:4:3.01:0,3,97	1/1:34,0:32:2.22:7,2,0	0/1:8,1:15:81.48:81,0,506	1/1:6,0:3:3.01:84,3,0	./.	0/0:14,0:8:9.03:0,9,144	./.	0/1:9,0:10:78.06:156,0,78	0/0:14,0:11:12.04:0,12,698	0/1:11,0:9:73.99:159,0,74	./.	./.	0/1:14,0:11:65.95:79,0,66	0/0:6,0:5:6.02:0,6,105	1/1:4,0:6:6.02:149,6,0	./.	./.	1/1:7,0:7:3.01:84,3,0	1/1:2,5:6:9.03:308,9,0	1/1:8,11:17:27.05:719,27,0	1/1:6,12:20:30.99:990,31,0	1/1:2,4:6:9.03:308,9,0
chr10	19862456	.	G	GA	861.05	PASS	AB=0.909;AC=3;AF=0.054;AN=56;BaseQRankSum=-6.732;DP=410;FS=0.000;HRun=9;HaplotypeScore=41.5208;InbreedingCoeff=0.5081;MQ=67.57;MQ0=1;MQRankSum=0.282;QD=19.57;ReadPosRankSum=-4.798;VQSLOD=1.7338;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:41.99:0,42,365	0/0:5,0:5:15:0,15,130	0/0:9,0:11:11.19:0,11,131	0/0:8,0:5:8.99:0,9,77	0/0:25,0:25:65.96:0,66,573	0/0:22,1:23:32.79:0,33,510	0/0:6,0:6:15:0,15,130	1/1:3,30:34:90.04:953,90,0	0/0:13,0:14:41.03:0,41,344	0/0:16,0:16:47.98:0,48,414	0/0:17,0:17:44.97:0,45,391	0/0:6,0:5:11.99:0,12,104	0/0:9,0:9:23.99:0,24,208	0/0:7,0:7:21:0,21,182	0/0:11,0:11:23.98:0,24,208	0/1:9,1:10:9.19:9,0,158	0/0:16,0:13:29.96:0,30,252	0/0:15,0:13:35.97:0,36,309	0/0:17,0:15:38.02:0,38,316	0/0:22,0:22:61.80:0,62,526	0/0:9,0:9:20.97:0,21,182	0/0:6,0:6:14.97:0,15,127	0/0:12,0:12:32.99:0,33,287	0/0:2,0:2:3:0,3,26	0/0:18,0:18:47.98:0,48,417	0/0:37,0:37:95.95:0,96,828	0/0:19,0:20:53.02:0,53,449	0/0:13,1:14:8.85:0,9,301
chr10	19864335	.	G	GGTGA	21354.39	PASS	AB=0.944;AC=31;AF=0.554;AN=56;BaseQRankSum=19.201;DP=662;FS=13.299;HRun=0;HaplotypeScore=169.4702;InbreedingCoeff=0.9319;MQ=73.54;MQ0=1;MQRankSum=-19.591;QD=58.19;ReadPosRankSum=-0.718;VQSLOD=5.6465;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:81.24:0,81,1501	0/0:14,0:14:42.14:0,42,783	0/0:21,0:20:57.20:0,57,1090	0/0:14,0:14:36.34:0,36,728	0/0:31,0:31:93.30:0,93,1768	0/0:30,0:30:90.31:0,90,1743	0/0:29,0:29:78.21:0,78,1408	1/1:9,19:29:78.20:1942,78,0	0/0:23,0:23:69.24:0,69,1337	1/1:7,16:23:69.24:1734,69,0	1/1:4,15:20:54.19:1451,54,0	1/1:7,18:27:66.23:1759,66,0	1/1:1,23:24:66.23:1773,66,0	1/1:3,17:20:54.19:1471,54,0	0/0:31,0:31:90.31:0,90,1744	1/1:5,15:20:51.18:1354,51,0	1/1:6,12:19:45.15:1171,45,0	1/1:7,7:14:27.09:721,27,0	1/1:4,9:13:39.13:949,39,0	1/1:6,34:40:99:2720,102,0	1/1:10,11:21:26.35:734,26,0	1/1:5,18:25:57.20:1523,57,0	1/1:4,11:18:39.13:1059,39,0	1/1:6,13:20:36.12:981,36,0	0/0:28,0:28:84.29:0,84,1626	0/1:32,1:34:11.63:12,0,1641	0/0:35,0:35:99:0,99,1903	0/0:10,0:10:27.09:0,27,523
chr10	19865247	.	C	CTGG	17680.61	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=14.142;DP=600;FS=10.138;HRun=0;HaplotypeScore=124.9846;InbreedingCoeff=0.9955;MQ=75.11;MQ0=1;MQRankSum=-8.911;QD=57.03;ReadPosRankSum=2.665;VQSLOD=6.6982;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,144,2639	0/0:14,0:14:42.14:0,42,782	0/0:16,0:16:45.15:0,45,710	0/0:16,0:16:48.04:0,48,765	0/0:25,0:25:72.25:0,72,1341	0/0:13,0:13:39.13:0,39,724	0/0:32,0:32:96.32:0,96,1751	1/1:4,12:20:57.14:1181,57,0	0/0:14,0:14:42.14:0,42,760	1/1:1,17:19:52.42:1231,52,0	1/1:1,9:10:12.04:295,12,0	1/1:4,19:21:60.21:1454,60,0	1/1:1,15:17:48.16:1181,48,0	1/1:1,17:20:53.75:1279,54,0	0/0:24,0:24:72.23:0,72,1296	1/1:5,18:22:63.17:1460,63,0	1/1:2,28:32:78.22:1865,78,0	1/1:2,15:17:48.16:1182,48,0	1/1:3,11:14:42.14:1018,42,0	1/1:2,15:22:36.12:886,36,0	1/1:1,24:24:49.51:1252,50,0	1/1:2,17:21:42.14:1034,42,0	1/1:1,15:16:30.10:736,30,0	1/1:2,27:29:66.23:1625,66,0	0/0:12,0:12:36.12:0,36,668	0/0:35,0:35:99:0,105,1946	0/0:31,0:31:93.32:0,93,1705	0/0:9,0:9:27.08:0,27,471
chr10	19865320	.	GA	G	2096.16	PASS	AB=0.828;AC=27;AF=0.482;AN=56;BaseQRankSum=3.155;DP=569;FS=1.531;HRun=2;HaplotypeScore=118.7080;InbreedingCoeff=0.8708;MQ=60.53;MQ0=26;MQRankSum=-3.055;QD=8.81;ReadPosRankSum=0.286;VQSLOD=1.1948;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:89.09:0,89,793	0/0:10,0:11:24.52:0,25,171	0/0:38,0:17:45.49:0,45,564	0/0:59,0:31:65.43:0,65,823	0/0:26,0:25:53.96:0,54,582	0/0:19,0:19:41.71:0,42,486	0/0:14,0:14:37.96:0,38,379	1/1:20,5:12:25.37:227,25,0	0/0:18,0:18:41.74:0,42,404	1/1:14,7:17:32.86:237,33,0	0/1:12,0:12:0.01:0,0,0	1/1:12,4:13:17.56:125,18,0	1/1:17,5:17:35.59:347,36,0	1/1:8,3:9:3.01:38,3,0	0/0:23,0:23:53.25:0,53,579	1/1:13,7:19:30.87:313,31,0	1/1:8,6:13:16.56:176,17,0	1/1:8,4:10:20.18:186,20,0	1/1:5,6:10:29.27:311,29,0	1/1:13,4:15:13.58:138,14,0	1/1:8,3:8:2.98:21,3,0	1/1:14,8:16:16.47:181,16,0	0/1:8,4:8:0:0,0,0	0/1:7,4:10:0:0,0,0	0/0:16,0:16:41.93:0,42,417	0/0:31,0:31:83.18:0,83,800	0/0:21,0:21:46.08:0,46,456	0/0:12,0:12:29.28:0,29,255
chr10	19865321	.	A	AG	4344.33	PASS	AB=0.788;AC=30;AF=0.536;AN=56;BaseQRankSum=3.656;DP=657;FS=0.845;HRun=4;HaplotypeScore=150.3139;InbreedingCoeff=0.8521;MQ=56.88;MQ0=27;MQRankSum=-6.760;QD=13.01;ReadPosRankSum=-1.970;VQSLOD=2.5912;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:41:98.87:0,99,1016	0/0:4,0:11:29.12:0,29,257	0/0:39,0:18:45.02:0,45,553	0/0:63,0:31:65.53:0,66,874	0/0:16,0:25:57.02:0,57,651	0/0:20,0:20:41.92:0,42,462	0/0:19,0:19:34.89:0,35,352	1/1:40,0:18:45.82:512,46,0	0/1:20,0:20:1.01:1,0,306	1/1:17,12:25:59.92:736,60,0	0/1:4,11:15:0.08:0,0,0	1/1:13,8:17:26.57:339,27,0	1/1:11,12:19:41.90:534,42,0	1/1:9,7:14:9.01:93,9,0	0/0:24,0:24:42.43:0,42,563	1/1:17,10:25:42:525,42,0	1/1:18,4:21:35.99:382,36,0	1/1:12,3:13:26.07:312,26,0	1/1:14,3:16:36.12:439,36,0	1/1:12,9:16:14.55:163,15,0	1/1:9,6:12:3.01:46,3,0	1/1:15,11:20:18.01:225,18,0	1/1:9,6:11:0.47:1,0,0	1/1:5,6:10:2.86:37,3,0	0/0:10,0:16:44.99:0,45,494	0/0:21,0:31:89.91:0,90,953	0/0:10,0:21:50.98:0,51,555	0/0:6,0:12:32.95:0,33,336
chr10	19865348	.	A	AGAGAGAGAGATC	4389.60	PASS	AB=1.000;AC=18;AF=0.321;AN=56;BaseQRankSum=10.373;DP=782;FS=50.914;HRun=0;HaplotypeScore=277.0371;InbreedingCoeff=0.0747;MQ=57.60;MQ0=21;MQRankSum=-9.653;QD=11.17;ReadPosRankSum=0.356;VQSLOD=2.1948;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:93.32:0,93,2109	0/0:11,0:11:24.08:0,24,627	0/0:37,0:19:24.10:0,24,663	0/0:60,0:20:27.02:0,27,524	0/0:29,0:28:54.18:0,54,980	1/1:13,12:29:9.44:503,9,0	1/1:9,0:23:3.01:44,3,0	0/1:45,0:32:99:622,0,694	1/1:15,9:30:26.58:914,27,0	0/1:40,0:37:99:842,0,541	0/0:23,0:22:15.52:0,16,232	0/1:26,0:25:99:227,0,430	0/1:29,0:27:99:234,0,229	0/1:27,0:25:99:125,0,481	1/1:15,0:34:3.01:159,3,0	0/1:33,0:32:99:158,0,479	0/1:22,0:22:99:100,0,469	0/1:16,0:14:99:253,0,220	0/1:22,0:22:99:122,0,482	0/0:27,0:24:3.81:0,4,357	0/0:19,0:17:11.97:0,12,180	0/0:37,0:32:34.49:0,34,600	0/0:15,0:13:18.05:0,18,275	0/1:17,0:16:85.14:85,0,254	0/0:14,0:14:27.09:0,27,581	0/0:33,0:33:81.27:0,81,1685	0/0:22,0:22:35.86:0,36,854	0/0:14,0:14:35.88:0,36,767
chr10	19865711	.	A	AG	16343.63	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=1.907;DP=709;FS=1.583;HRun=1;HaplotypeScore=82.2638;InbreedingCoeff=0.9951;MQ=80.78;MQ0=0;MQRankSum=-4.076;QD=40.96;ReadPosRankSum=3.661;VQSLOD=5.3288;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,108,1355	0/0:8,0:8:21.07:0,21,273	0/0:17,0:17:34.89:0,35,404	0/0:21,0:21:42.12:0,42,527	0/0:24,0:24:66.21:0,66,857	0/0:27,0:27:81.26:0,81,1052	0/0:26,0:26:78.24:0,78,998	1/1:0,30:30:90.22:1280,90,0	0/0:26,0:26:78.24:0,78,998	1/1:2,36:37:99:1622,111,0	1/1:1,13:14:39.09:549,39,0	1/1:1,16:17:39.13:585,39,0	1/1:1,26:27:72.24:1079,72,0	1/1:0,35:35:87.29:1304,87,0	0/0:28,0:28:84.27:0,84,1090	1/1:1,22:23:60.20:898,60,0	1/1:0,28:28:78.26:1169,78,0	1/1:0,18:18:54.18:809,54,0	1/1:1,13:14:39.13:585,39,0	1/1:0,37:37:99:1563,105,0	1/1:1,27:28:78.26:1169,78,0	1/1:0,24:25:69.23:1034,69,0	1/1:1,25:26:69.23:1034,69,0	1/1:1,38:39:99:1664,111,0	0/0:19,0:19:57.16:0,57,724	0/0:40,2:42:33.53:0,34,1429	0/0:29,0:29:84.26:0,84,1075	0/0:4,0:4:12.04:0,12,156
chr10	19866142	.	A	ACTT	17334.75	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=17.259;DP=614;FS=1.806;HRun=0;HaplotypeScore=126.8159;InbreedingCoeff=0.9995;MQ=71.94;MQ0=0;MQRankSum=-11.892;QD=54.51;ReadPosRankSum=-1.083;VQSLOD=6.0469;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:75.23:0,75,1199	0/0:11,0:11:27.09:0,27,441	0/0:14,0:14:30.10:0,30,466	0/0:12,0:12:33.11:0,33,502	0/0:30,0:30:87.30:0,87,1421	0/0:32,0:32:93.32:0,93,1519	0/0:14,0:14:42.14:0,42,684	1/1:8,16:25:57.17:1216,57,0	0/0:21,0:21:60.20:0,60,980	1/1:1,17:18:54.19:1204,54,0	1/1:5,24:30:69.24:1504,69,0	1/1:3,16:19:51.17:1079,51,0	1/1:3,20:24:54.18:1177,54,0	1/1:3,12:15:33.11:733,33,0	0/0:30,0:30:84.27:0,84,1348	1/1:1,9:12:27.09:602,27,0	1/1:0,18:18:51.17:1111,51,0	1/1:1,11:12:30.09:670,30,0	1/1:3,12:16:45.12:920,45,0	1/1:2,35:38:99:2379,108,0	1/1:1,17:19:39.09:824,39,0	1/1:3,23:28:69.24:1504,69,0	1/1:4,21:25:69.24:1506,69,0	1/1:4,15:19:42.14:905,42,0	0/0:27,0:27:78.24:0,78,1224	0/0:28,0:28:78.26:0,78,1251	0/0:30,0:30:84.29:0,84,1369	0/0:19,0:19:51.16:0,51,808
chr10	19868147	.	C	CT	12510.48	PASS	AB=0.900;AC=29;AF=0.518;AN=56;BaseQRankSum=-14.161;DP=562;FS=7.310;HRun=0;HaplotypeScore=53.0535;InbreedingCoeff=0.9255;MQ=80.60;MQ0=0;MQRankSum=-3.718;QD=39.84;ReadPosRankSum=5.029;VQSLOD=4.9527;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,102,1388	0/0:7,0:7:21.07:0,21,294	0/0:22,0:22:60.19:0,60,815	0/0:14,0:14:35.61:0,36,482	0/0:16,0:15:45.10:0,45,576	0/0:20,0:20:57.17:0,57,764	0/0:32,0:32:93.28:0,93,1265	0/0:18,0:18:54.17:0,54,733	0/0:18,0:18:54.14:0,54,702	1/1:0,15:15:42.12:640,42,0	1/1:0,9:9:15.05:240,15,0	1/1:0,30:30:75.26:1187,75,0	1/1:1,15:16:45.15:718,45,0	1/1:0,20:20:54.18:863,54,0	0/0:16,0:16:48.16:0,48,671	1/1:0,13:13:39.13:623,39,0	1/1:2,44:46:99:2010,126,0	1/1:1,29:30:78.27:1246,78,0	1/1:0,19:19:57.18:868,57,0	1/1:0,11:11:30.10:478,30,0	1/1:0,34:34:84.29:1342,84,0	1/1:0,10:10:27.09:432,27,0	1/1:0,18:18:45.15:719,45,0	1/1:1,24:25:69.24:1100,69,0	0/0:14,0:14:42.11:0,42,538	0/1:16,2:18:44.79:45,0,548	0/0:20,0:20:60.20:0,60,830	0/0:15,0:15:45.15:0,45,629
chr10	19868736	.	T	TC	3066.38	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=13.026;DP=715;FS=1.905;HRun=3;HaplotypeScore=76.2732;InbreedingCoeff=0.9994;MQ=65.74;MQ0=1;MQRankSum=-0.737;QD=29.20;ReadPosRankSum=-1.075;VQSLOD=2.7338;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,111,1364	0/0:11,0:11:33.10:0,33,409	0/0:41,0:37:81.09:0,81,1119	0/0:27,0:25:74.94:0,75,885	0/0:14,0:14:39.11:0,39,472	1/1:1,15:16:39.13:514,39,0	1/1:1,19:20:58.07:753,58,0	1/1:4,18:22:52.82:625,53,0	1/1:1,15:16:45.15:592,45,0	0/0:22,0:22:66.20:0,66,800	0/0:18,0:18:51.16:0,51,630	0/0:35,0:35:99:0,99,1225	0/0:23,0:23:60.19:0,60,741	0/0:36,0:36:99:0,105,1287	1/1:4,27:31:57.89:759,58,0	0/0:36,0:36:99:0,102,1239	0/0:39,0:39:99:0,117,1435	0/0:22,0:22:66.21:0,66,816	0/0:23,0:23:63.19:0,63,769	0/0:22,0:22:63.20:0,63,777	0/0:47,0:47:99:0,129,1597	0/0:27,0:27:81.23:0,81,975	0/0:17,0:17:45.14:0,45,558	0/0:24,0:24:72.23:0,72,892	0/0:25,0:25:69.22:0,69,855	0/0:29,0:29:75.24:0,75,930	0/0:23,0:23:69.22:0,69,855	0/0:8,0:8:24.08:0,24,297
chr10	19869072	.	CA	C	3862.41	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=20.324;DP=716;FS=1.531;HRun=1;HaplotypeScore=107.1345;InbreedingCoeff=0.9716;MQ=84.95;MQ0=0;MQRankSum=-2.978;QD=10.52;ReadPosRankSum=5.589;VQSLOD=1.7714;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,111,1639	0/0:6,0:6:18.05:0,18,246	0/0:21,0:22:59.45:0,59,855	0/0:23,0:23:65.47:0,65,899	0/0:24,0:24:69.21:0,69,1020	0/0:19,0:19:57:0,57,793	0/0:35,0:35:99:0,105,1558	0/0:40,0:40:99:0,117,1713	0/0:21,0:21:63.20:0,63,937	1/1:27,1:28:68.62:288,69,0	1/1:17,0:17:19.27:169,19,0	1/1:23,1:24:33.76:278,34,0	1/1:31,1:32:34.02:361,34,0	1/1:16,0:16:41.13:188,41,0	0/0:32,0:32:96.24:0,96,1332	1/1:22,0:22:4.62:154,5,0	1/1:20,0:20:55.28:254,55,0	1/1:31,0:30:59.02:351,59,0	1/1:33,0:33:31.32:281,31,0	1/1:24,1:25:35.71:254,36,0	1/1:36,0:36:63.08:339,63,0	1/1:30,0:30:79.33:354,79,0	1/1:26,0:26:43.05:296,43,0	1/1:27,0:26:65.84:294,66,0	0/0:25,0:25:75.21:0,75,1078	0/0:26,0:26:68.27:0,68,1063	0/0:35,0:35:99:0,102,1554	0/0:3,0:3:9.03:0,9,138
chr10	19869073	.	AC	A	11936.09	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=16.108;DP=713;FS=2.325;HRun=4;HaplotypeScore=77.1583;InbreedingCoeff=0.9899;MQ=85.52;MQ0=0;MQRankSum=-4.332;QD=32.79;ReadPosRankSum=4.213;VQSLOD=5.4737;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,105,1453	0/0:6,0:6:15.05:0,15,210	0/0:22,0:22:60.07:0,60,781	0/0:24,0:24:66.15:0,66,865	0/0:25,0:25:69.21:0,69,943	0/0:18,0:18:51.14:0,51,677	0/0:35,0:35:99:0,102,1408	0/0:41,0:41:99:0,111,1502	0/0:21,0:21:63.20:0,63,866	1/1:1,27:28:84.26:1005,84,0	1/1:0,16:16:45.14:539,45,0	1/1:2,22:24:60.18:717,60,0	1/1:3,29:32:84.26:1007,84,0	1/1:1,16:17:45.14:540,45,0	0/0:31,0:31:81.27:0,81,1133	1/1:1,20:21:54.17:648,54,0	1/1:0,20:20:60.18:720,60,0	1/1:1,30:31:87.27:1044,87,0	1/1:2,31:33:93.28:1111,93,0	1/1:2,22:24:63.19:755,63,0	1/1:1,35:36:93.28:1116,93,0	1/1:0,30:30:87.27:1044,87,0	1/1:1,24:25:69.21:827,69,0	1/1:0,27:27:72.22:864,72,0	0/0:25,0:25:66.20:0,66,905	0/0:26,0:26:42.75:0,43,1010	0/0:35,0:35:99:0,105,1454	0/0:3,0:3:9.03:0,9,123
chr10	19870091	.	TTTTTC	T	9553.19	PASS	AB=0.727;AC=41;AF=0.732;AN=56;BaseQRankSum=8.848;DP=614;FS=4.229;HRun=0;HaplotypeScore=121.1306;InbreedingCoeff=0.7809;MQ=68.35;MQ0=4;MQRankSum=2.516;QD=20.86;ReadPosRankSum=2.980;VQSLOD=4.6418;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,21:33:45.15:797,45,0	1/1:4,10:14:24.08:415,24,0	0/0:17,0:11:0.46:0,0,1	0/0:26,0:12:2.60:0,3,10	1/1:6,14:20:38.99:568,39,0	0/0:27,0:27:54.19:0,54,1510	0/0:19,0:19:33.10:0,33,826	0/0:29,0:29:23.80:0,24,291	0/0:19,0:19:30.10:0,30,706	1/1:9,18:27:54.15:899,54,0	1/1:7,10:17:29.97:439,30,0	1/1:19,12:31:12.04:217,12,0	1/1:13,14:27:38.97:705,39,0	1/1:10,5:15:9.03:163,9,0	0/0:19,0:19:33.11:0,33,905	1/1:4,8:12:18.06:325,18,0	1/1:13,18:31:31.22:593,31,0	1/1:12,15:26:39.07:658,39,0	1/1:16,5:20:13.29:268,13,0	1/1:8,17:25:42.02:624,42,0	0/1:5,3:8:13.37:99,0,13	1/1:13,8:21:18.02:289,18,0	1/1:16,11:27:33.11:596,33,0	1/1:10,6:16:9.03:163,9,0	1/1:8,13:21:33.11:596,33,0	1/1:13,13:26:36.12:650,36,0	1/1:13,17:30:24.08:434,24,0	1/1:7,2:9:3.01:54,3,0
chr10	19870638	.	G	GT	13075.25	PASS	AB=0.920;AC=29;AF=0.518;AN=56;BaseQRankSum=15.909;DP=573;FS=3.638;HRun=0;HaplotypeScore=77.4943;InbreedingCoeff=0.9285;MQ=92.67;MQ0=0;MQRankSum=-4.016;QD=42.18;ReadPosRankSum=3.882;VQSLOD=5.5748;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:51.76:0,52,826	0/0:10,0:10:30.10:0,30,420	0/0:22,0:22:63.20:0,63,837	0/0:26,0:26:75.21:0,75,960	0/0:21,0:21:63.18:0,63,847	0/0:16,0:16:48.16:0,48,671	0/0:24,0:24:72.24:0,72,1007	0/0:31,0:31:93.30:0,93,1285	0/0:21,0:21:63.21:0,63,879	1/1:1,25:26:75.26:1200,75,0	1/1:1,13:14:36.12:575,36,0	1/1:0,30:30:87.30:1391,87,0	1/1:0,20:20:57.19:911,57,0	1/1:0,20:20:57.19:911,57,0	0/0:20,0:20:57.19:0,57,797	1/1:1,37:38:72.42:1733,72,0	1/1:0,18:18:51.17:815,51,0	1/1:0,18:18:48.16:767,48,0	1/1:0,20:20:60.16:909,60,0	1/1:0,20:20:60.20:959,60,0	1/1:0,16:16:42.14:672,42,0	1/1:0,20:20:57.19:910,57,0	1/1:0,17:17:51.17:815,51,0	1/1:0,10:10:30.10:480,30,0	0/0:18,0:18:54.18:0,54,755	0/1:21,2:23:26.74:27,0,812	0/0:19,0:19:57.19:0,57,795	0/0:13,0:13:39.13:0,39,542
chr10	19870744	.	C	CTCT	11200.42	PASS	AB=0.672;AC=31;AF=0.554;AN=56;BaseQRankSum=0.543;DP=485;FS=0.000;HRun=0;HaplotypeScore=87.0051;InbreedingCoeff=0.7718;MQ=72.17;MQ0=3;MQRankSum=-3.071;QD=34.25;ReadPosRankSum=1.048;VQSLOD=4.7204;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:36.12:0,36,609	0/0:8,0:8:21.07:0,21,367	0/0:9,0:10:27.05:0,27,350	0/0:17,0:17:35.24:0,35,509	0/0:22,0:22:63.16:0,63,988	0/1:3,0:18:59.77:60,0,81	0/0:2,0:10:17.26:0,17,67	0/1:11,0:42:99:106,0,322	0/0:2,0:10:17.67:0,18,70	1/1:7,10:18:51.12:938,51,0	1/1:1,18:20:51.17:1092,51,0	1/1:4,19:26:57.20:1273,57,0	1/1:1,9:11:21.07:472,21,0	1/1:0,15:17:36.12:809,36,0	0/0:2,0:17:29.47:0,29,101	1/1:1,13:14:39.13:877,39,0	1/1:1,19:20:35.94:809,36,0	1/1:1,9:11:15.05:337,15,0	1/1:0,24:24:69.06:1130,69,0	1/1:1,19:22:59.77:963,60,0	1/1:1,11:13:21.07:473,21,0	1/1:0,11:12:20.99:421,21,0	1/1:0,31:32:51.18:1132,51,0	1/1:2,5:7:12.02:226,12,0	0/0:15,0:15:42.14:0,42,736	0/1:15,2:17:83.66:84,0,687	0/0:23,0:23:66.21:0,66,1102	0/0:12,0:12:36.07:0,36,545
chr10	19870880	.	GT	G	4756.52	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=11.192;DP=426;FS=10.440;HRun=9;HaplotypeScore=43.1723;InbreedingCoeff=0.9835;MQ=65.00;MQ0=0;MQRankSum=1.873;QD=23.20;ReadPosRankSum=3.614;VQSLOD=4.9864;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:13,1:16:11.30:0,11,339	0/0:7,0:7:21.03:0,21,221	0/0:6,0:6:9.02:0,9,96	0/0:9,0:9:21.31:0,21,208	0/0:28,0:28:69.21:0,69,796	0/0:10,0:10:26.11:0,26,283	0/0:11,0:11:27.08:0,27,312	0/0:36,0:36:90.22:0,90,1007	0/0:11,0:11:30.08:0,30,338	1/1:1,17:18:51.03:467,51,0	1/1:2,12:14:38.51:338,39,0	1/1:2,12:14:36.02:329,36,0	1/1:1,10:11:30.01:274,30,0	1/1:1,14:15:36.02:329,36,0	0/0:15,0:15:42.09:0,42,471	1/1:1,14:15:42.02:384,42,0	1/1:5,13:18:36:329,36,0	1/1:3,22:25:66.03:604,66,0	1/1:4,9:13:27.01:247,27,0	1/1:1,17:18:54.03:494,54,0	1/1:1,7:8:18.01:165,18,0	1/1:2,13:15:39.48:356,39,0	1/1:3,9:12:27.01:247,27,0	1/1:2,7:8:21.01:192,21,0	0/0:17,0:17:48.13:0,48,541	0/0:21,0:21:51.14:0,51,580	0/0:20,0:20:60.18:0,60,692	0/0:14,0:14:42.12:0,42,485
chr10	19871042	.	TGGG	T	3460.90	PASS	AB=0.656;AC=40;AF=0.714;AN=56;BaseQRankSum=0.819;DP=318;FS=0.000;HRun=12;HaplotypeScore=125.3498;InbreedingCoeff=0.5684;MQ=49.36;MQ0=3;MQRankSum=-4.725;QD=13.47;ReadPosRankSum=3.442;VQSLOD=1.5572;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:7,2:18:4.82:61,0,5	0/0:3,0:4:1.25:0,1,3	0/0:13,0:6:6.02:0,6,99	0/0:8,0:3:0:0,0,0	0/1:4,2:7:0.98:32,0,1	1/1:3,15:18:42.11:530,42,0	1/1:1,19:21:54.10:662,54,0	1/1:10,7:17:17.99:227,18,0	1/1:2,7:9:24.06:301,24,0	1/1:6,0:6:5.86:36,6,0	1/1:15,0:15:25.04:145,25,0	1/1:6,0:6:11.76:71,12,0	1/1:15,0:15:32.34:196,32,0	1/1:11,0:11:17.64:107,18,0	1/1:1,10:11:30.10:379,30,0	1/1:8,0:8:17.64:107,18,0	1/1:14,0:14:14.65:89,15,0	1/1:9,0:9:8.79:53,9,0	1/1:11,0:10:9.68:55,10,0	1/1:13,0:13:23.52:142,24,0	1/1:17,0:17:5.78:25,6,0	1/1:6,0:6:8.82:53,9,0	1/1:13,0:13:14.69:89,15,0	0/0:4,0:4:0:0,0,0	1/1:1,3:10:2.55:101,3,0	0/0:5,0:16:12.76:0,13,33	0/0:2,0:12:11.71:0,12,42	0/0:1,0:2:1.25:0,1,3
chr10	19871046	.	GGGGGGGGGTCCTGCCTTGGCAGGACCAA	G	14513.97	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=11.060;DP=318;FS=1.839;HRun=0;HaplotypeScore=233.7298;InbreedingCoeff=0.8688;MQ=49.51;MQ0=3;MQRankSum=-9.746;QD=105.94;ReadPosRankSum=7.042;VQSLOD=4.1835;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:19:42.14:0,42,3944	0/0:3,0:3:6.02:0,6,379	0/0:13,0:5:8.72:0,9,181	0/0:7,0:2:3.01:0,3,50	0/0:9,0:9:21.07:0,21,2067	0/0:17,0:17:45.11:0,45,3903	0/0:23,0:23:63.22:0,63,5968	0/0:11,0:11:27.04:0,27,766	0/0:9,0:9:27.08:0,27,2181	1/1:4,2:6:5.98:430,6,0	1/1:6,11:17:27.07:1930,27,0	1/1:2,4:6:12.03:866,12,0	1/1:3,11:14:33.08:2380,33,0	1/1:4,7:11:18.03:1296,18,0	0/0:12,0:12:33.11:0,33,2926	1/1:1,6:7:18.05:1298,18,0	1/1:8,6:14:14.94:1082,15,0	1/1:3,3:6:8.99:649,9,0	1/1:6,4:9:11.99:698,12,0	1/1:5,8:13:24.06:1731,24,0	1/1:11,5:16:7.12:423,7,0	1/1:1,4:5:9.03:649,9,0	1/1:7,5:12:15.02:1082,15,0	0/0:3,0:3:0:0,0,0	0/0:13,0:12:30.10:0,30,3082	0/0:19,0:19:39.13:0,39,3762	0/0:17,0:17:42.13:0,42,3844	0/0:5,0:5:15.03:0,15,1427
chr10	19873430	.	A	ATAATAG	1409.25	PASS	AB=0.914;AC=17;AF=0.340;AN=50;BaseQRankSum=-6.640;DP=248;FS=8.547;HRun=0;HaplotypeScore=56.5415;InbreedingCoeff=0.3911;MQ=50.39;MQ0=32;MQRankSum=1.535;QD=13.29;ReadPosRankSum=-1.101;VQSLOD=0.1384;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:11:27.44:303,27,0	1/1:0,8:8:11.79:144,12,0	0/1:7,0:3:0.38:12,0,0	0/0:4,0:1:3.01:0,3,30	1/1:10,0:9:23.99:224,24,0	0/1:8,0:5:34.88:41,0,35	0/0:1,0:1:3:0,3,25	0/0:25,0:24:38.12:0,38,438	0/0:3,0:1:0:0,0,0	0/0:5,0:4:1.13:0,1,24	0/0:11,0:7:14.94:0,15,142	./.	0/0:4,0:3:6:0,6,78	0/0:8,0:2:3.48:0,3,64	0/1:5,0:3:9.07:45,0,9	0/0:7,0:5:15:0,15,187	0/0:26,0:20:46.66:0,47,596	0/0:17,0:13:30.72:0,31,415	0/1:9,0:8:14.99:15,0,134	0/0:10,0:7:11.78:0,12,77	0/0:3,0:2:5.83:0,6,38	./.	./.	0/0:5,0:2:5.95:0,6,54	1/1:1,9:10:3.01:84,3,0	1/1:0,1:10:29.91:316,30,0	0/1:3,8:11:6.48:164,0,6	1/1:16,0:16:4.47:220,4,0
chr10	19873452	.	TCGTAGAAGAAGA	T	1931.16	PASS	AB=1.000;AC=26;AF=0.542;AN=48;BaseQRankSum=3.190;DP=291;FS=2.312;HRun=0;HaplotypeScore=76.6104;InbreedingCoeff=0.5973;MQ=48.68;MQ0=36;MQRankSum=-0.466;QD=15.21;ReadPosRankSum=-0.790;VQSLOD=1.5016;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:35.91:0,36,673	0/0:8,0:8:9.34:0,9,88	0/0:18,0:8:7.30:0,7,100	0/0:15,0:2:1.59:0,2,27	0/0:12,0:11:29.11:0,29,468	0/0:13,0:10:20.64:0,21,272	0/1:4,0:3:27.61:40,0,28	0/0:30,0:20:40.75:0,41,590	./.	1/1:1,6:6:8.97:98,9,0	1/1:4,10:10:6.02:68,6,0	./.	1/1:4,0:3:6.02:118,6,0	1/1:9,0:3:6.02:96,6,0	1/1:7,0:5:11.80:50,12,0	1/1:5,0:3:9.03:139,9,0	1/1:24,0:17:35.23:578,35,0	1/1:15,0:11:33.09:528,33,0	1/1:1,0:7:15.03:251,15,0	1/1:3,0:8:8.97:88,9,0	1/1:2,0:1:0.89:2,1,0	./.	./.	1/1:8,0:5:3.95:33,4,0	0/0:11,0:11:14.10:0,14,158	0/1:9,0:9:16.14:16,0,281	0/0:13,0:12:11.92:0,12,145	0/0:10,0:10:1.24:0,1,197
chr10	19873455	.	TAGA	T	489.43	PASS	AB=0.964;AC=22;AF=0.688;AN=32;BaseQRankSum=0.703;DP=297;FS=6.075;HRun=0;HaplotypeScore=54.8030;InbreedingCoeff=0.2079;MQ=48.26;MQ0=39;MQRankSum=0.775;QD=3.60;ReadPosRankSum=1.207;VQSLOD=0.8734;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:12,0:12:22.36:22,0,180	0/0:8,0:8:0:0,0,0	./.	./.	0/0:12,0:11:3.48:0,3,52	0/1:12,1:10:4.46:4,0,40	0/0:6,0:4:0:0,0,0	./.	./.	1/1:7,0:6:3:26,3,0	./.	./.	1/1:6,0:5:2.90:17,3,0	./.	1/1:3,5:6:12.04:149,12,0	./.	1/1:25,0:18:5.55:43,6,0	1/1:14,0:10:2.99:23,3,0	1/1:8,0:7:2.99:24,3,0	./.	./.	./.	./.	0/0:9,0:6:3.01:0,3,49	1/1:11,0:11:6.50:100,6,0	1/1:8,0:9:5.98:50,6,0	1/1:11,2:12:9.03:112,9,0	1/1:8,0:10:2.97:20,3,0
chr10	19874030	.	T	TCC	10611.55	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=6.308;DP=594;FS=1.543;HRun=7;HaplotypeScore=113.4628;InbreedingCoeff=0.9988;MQ=79.23;MQ0=2;MQRankSum=-10.420;QD=27.14;ReadPosRankSum=-0.195;VQSLOD=4.1181;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:72.18:0,72,827	0/0:11,0:11:24.07:0,24,279	0/0:28,0:25:47.63:0,48,527	0/0:27,0:27:59.74:0,60,597	0/0:30,0:30:84.23:0,84,967	1/1:6,0:23:31.48:174,31,0	1/1:9,0:19:34.93:143,35,0	1/1:14,3:36:70.42:318,70,0	1/1:3,0:19:41.75:144,42,0	1/1:9,16:24:57.19:929,57,0	1/1:8,15:23:42.14:687,42,0	1/1:6,20:26:57.18:910,57,0	1/1:6,17:23:54.18:880,54,0	1/1:6,9:14:33.05:486,33,0	1/1:3,0:21:44.79:157,45,0	1/1:2,19:21:60.16:943,60,0	1/1:3,15:19:42.14:689,42,0	1/1:4,8:11:27.09:442,27,0	1/1:7,12:19:42.14:675,42,0	1/1:4,23:28:68.62:949,69,0	1/1:2,14:15:33.07:512,33,0	1/1:5,9:14:36.11:553,36,0	1/1:7,11:17:42.12:629,42,0	1/1:5,9:14:24.08:393,24,0	0/0:24,0:24:66.19:0,66,769	0/0:18,0:18:45.12:0,45,524	0/0:28,0:28:81.23:0,81,943	0/0:9,0:9:27.08:0,27,315
chr10	19874056	.	TA	T	9789.08	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=12.735;DP=545;FS=0.730;HRun=5;HaplotypeScore=93.9947;InbreedingCoeff=0.9978;MQ=74.12;MQ0=0;MQRankSum=-10.127;QD=26.97;ReadPosRankSum=0.007;VQSLOD=4.3536;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:69.17:0,69,902	0/0:12,0:12:36.11:0,36,476	0/0:25,0:22:27.16:0,27,576	0/0:20,0:20:39.12:0,39,484	0/0:26,0:26:78.25:0,78,1041	1/1:5,19:24:60.15:669,60,0	1/1:2,16:18:39.11:441,39,0	1/1:5,34:39:99:1137,102,0	1/1:1,20:21:57.14:633,57,0	1/1:2,17:19:51.14:577,51,0	1/1:2,17:19:36.10:408,36,0	1/1:4,15:19:48.13:535,48,0	1/1:2,21:23:57.16:644,57,0	1/1:1,12:13:33.09:373,33,0	1/1:2,21:23:51.14:577,51,0	1/1:1,22:23:63.15:700,63,0	1/1:2,15:17:33.09:370,33,0	1/1:0,9:9:21.06:238,21,0	1/1:2,19:21:54.11:589,54,0	1/1:2,25:27:72.05:781,72,0	1/1:4,10:14:21.06:238,21,0	1/1:2,10:12:27.07:306,27,0	1/1:0,9:9:27.08:305,27,0	1/1:2,11:13:24.06:268,24,0	0/0:16,0:16:48.16:0,48,649	0/0:20,0:20:60.18:0,60,777	0/0:25,0:25:72.23:0,72,961	0/0:13,0:13:39.13:0,39,529
chr10	19874194	.	AT	A	4325.42	PASS	AB=0.794;AC=30;AF=0.536;AN=56;BaseQRankSum=-9.435;DP=582;FS=2.836;HRun=12;HaplotypeScore=85.1389;InbreedingCoeff=0.7635;MQ=73.33;MQ0=1;MQRankSum=1.721;QD=12.65;ReadPosRankSum=0.371;VQSLOD=4.9821;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:33:40.05:0,40,216	0/0:3,0:14:28.71:0,29,155	0/1:15,1:15:20.68:34,0,21	0/0:9,0:7:12.01:0,12,111	0/0:6,0:25:55.74:0,56,296	0/0:6,0:19:38.98:0,39,221	0/0:8,0:19:40.46:0,40,260	1/1:8,0:37:55.42:161,55,0	0/0:7,0:17:32.82:0,33,192	1/1:3,19:22:53.74:413,54,0	1/1:8,14:22:5.33:225,5,0	1/1:5,10:15:26.83:209,27,0	1/1:5,11:16:2.42:202,2,0	1/1:6,11:17:29.82:227,30,0	0/0:8,0:20:45.92:0,46,255	1/1:9,18:27:41.78:325,42,0	1/1:10,21:31:1.84:378,2,0	1/1:2,15:17:38.84:302,39,0	1/1:4,16:21:46.79:352,47,0	1/1:4,21:25:34.32:404,34,0	1/1:8,19:29:2.93:369,3,0	1/1:2,15:17:38.81:302,39,0	1/1:4,15:19:23.72:322,24,0	0/1:5,5:11:10.49:102,0,10	0/0:9,0:16:43.69:0,44,285	0/0:6,0:19:41.70:0,42,249	0/0:12,0:35:45.50:0,46,247	0/0:3,0:12:22.73:0,23,115
chr10	19875339	.	G	GA	5852.82	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=10.116;DP=555;FS=2.005;HRun=9;HaplotypeScore=69.4854;InbreedingCoeff=0.9929;MQ=81.51;MQ0=0;MQRankSum=-1.863;QD=24.39;ReadPosRankSum=-0.714;VQSLOD=5.4049;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,46:53:99:1171,108,0	1/1:1,11:12:24.06:264,24,0	0/0:19,0:18:32.81:0,33,258	0/0:14,1:17:13.67:0,14,144	1/1:4,25:29:69.19:763,69,0	1/1:0,10:10:21.06:232,21,0	1/1:1,16:17:42.11:465,42,0	1/1:6,12:18:36.52:373,37,0	1/1:0,8:8:21.06:232,21,0	0/0:13,0:13:29.98:0,30,260	0/0:16,0:16:47.99:0,48,417	0/0:25,0:25:65.97:0,66,569	0/0:23,0:23:56.99:0,57,495	0/0:16,0:16:41.99:0,42,364	1/1:8,18:26:54.11:584,54,0	0/0:19,0:19:53.97:0,54,465	0/0:23,0:23:56.94:0,57,486	0/0:24,0:24:68.96:0,69,593	0/0:20,0:20:47.94:0,48,411	0/0:25,0:25:71.84:0,72,609	0/0:14,0:14:35.99:0,36,312	0/0:17,0:17:41.98:0,42,364	0/0:17,0:17:47.96:0,48,412	0/0:27,0:27:74.93:0,75,639	1/1:1,21:23:60.16:662,60,0	1/1:5,22:27:43.08:674,43,0	1/1:3,6:9:15.04:166,15,0	1/1:0,8:8:24.06:265,24,0
chr10	19875814	.	T	TAA	3975.27	PASS	AB=0.759;AC=21;AF=0.375;AN=56;BaseQRankSum=9.356;DP=468;FS=11.490;HRun=0;HaplotypeScore=117.0213;InbreedingCoeff=0.8609;MQ=73.00;MQ0=3;MQRankSum=-11.486;QD=21.37;ReadPosRankSum=1.580;VQSLOD=3.9838;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,2:22:3.59:317,4,0	1/1:1,1:4:5.60:88,6,0	0/0:27,0:14:22.24:0,22,394	0/0:22,0:18:32.47:0,32,352	1/1:6,3:19:42.60:404,43,0	1/1:2,17:20:55.97:774,56,0	1/1:6,13:20:42.22:579,42,0	0/0:34,0:34:99:0,99,1570	1/1:4,6:11:25.65:357,26,0	0/0:14,0:14:42.13:0,42,638	0/0:13,0:13:36.12:0,36,578	0/0:10,0:10:21.07:0,21,343	0/0:25,0:25:75.24:0,75,1158	0/0:22,0:22:57.16:0,57,867	1/1:9,7:17:41.03:487,41,0	0/0:13,0:13:27.09:0,27,436	0/0:20,0:20:48.16:0,48,765	0/0:12,0:12:30.10:0,30,480	0/0:18,0:18:54.18:0,54,873	0/0:14,0:14:42.14:0,42,660	0/0:7,0:7:18.06:0,18,284	0/0:10,0:10:30.09:0,30,461	0/0:14,0:14:39.13:0,39,634	0/0:7,0:7:21.07:0,21,338	1/1:9,1:19:38.82:342,39,0	0/1:15,1:22:26.45:223,0,26	1/1:15,1:25:34.08:356,34,0	1/1:3,0:5:5.09:49,5,0
chr10	19875850	.	GGT	G	3432.94	PASS	AB=0.993;AC=43;AF=0.768;AN=56;BaseQRankSum=1.013;DP=463;FS=0.000;HRun=0;HaplotypeScore=160.0971;InbreedingCoeff=0.2955;MQ=58.39;MQ0=0;MQRankSum=-0.535;QD=8.58;ReadPosRankSum=7.634;VQSLOD=2.5580;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:21:31.41:228,31,0	1/1:10,1:11:20.86:141,21,0	0/0:5,0:4:12.01:0,12,161	0/0:15,0:14:23.33:0,23,322	1/1:20,2:22:51.06:294,51,0	0/1:19,0:19:16.82:155,0,17	1/1:19,0:19:8.17:159,8,0	0/0:42,0:42:79.74:0,80,371	1/1:12,1:13:17.22:181,17,0	0/1:18,0:18:27.64:70,0,28	1/1:13,0:13:29.30:110,29,0	0/1:10,0:10:5.76:73,0,6	1/1:19,0:19:47.07:228,47,0	0/1:21,0:21:8.75:121,0,9	1/1:11,0:11:4.84:82,5,0	0/1:15,0:15:4.65:74,0,5	1/1:23,0:23:32.86:166,33,0	0/1:18,1:19:23.89:101,0,24	1/1:21,0:21:29.96:139,30,0	1/1:14,0:14:9.67:90,10,0	1/1:12,0:12:22.29:87,22,0	1/1:8,0:8:17.61:74,18,0	1/1:14,0:13:28.77:134,29,0	1/1:7,0:7:7.34:27,7,0	1/1:15,1:16:15.14:147,15,0	0/1:28,0:28:0.71:187,0,1	1/1:22,1:22:58.76:338,59,0	1/1:3,0:3:4.42:28,4,0
chr10	19875852	.	TGG	T	10669.29	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-3.516;DP=460;FS=6.934;HRun=10;HaplotypeScore=134.8458;InbreedingCoeff=0.9017;MQ=56.34;MQ0=0;MQRankSum=-3.406;QD=24.19;ReadPosRankSum=3.949;VQSLOD=3.4776;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,16:21:51.12:560,51,0	1/1:2,10:12:20.99:291,21,0	0/0:4,0:3:9.03:0,9,124	0/0:15,0:13:26.89:0,27,316	1/1:6,16:22:54.14:596,54,0	1/1:6,13:19:45.10:491,45,0	1/1:8,11:19:39.07:428,39,0	1/1:7,0:43:66.57:341,67,0	1/1:5,8:13:30.08:332,30,0	1/1:3,15:18:44.86:479,45,0	1/1:1,12:13:36.09:399,36,0	1/1:3,7:10:18.05:197,18,0	1/1:1,16:18:54.13:592,54,0	1/1:2,19:21:42.08:456,42,0	1/1:1,10:12:23.80:246,24,0	1/1:2,13:15:29.82:313,30,0	1/1:0,23:23:57.11:621,57,0	1/1:4,14:18:39.06:421,39,0	1/1:1,19:20:56.97:602,57,0	1/1:3,12:15:36.08:399,36,0	1/1:1,12:13:26.94:298,27,0	1/1:1,7:8:21.06:232,21,0	1/1:1,13:14:33.09:366,33,0	1/1:1,6:7:9.02:100,9,0	1/1:6,8:14:36.09:397,36,0	1/1:6,22:28:68.34:763,68,0	1/1:6,16:21:60.15:663,60,0	1/1:1,2:3:8.97:86,9,0
chr10	19875861	.	GGT	G	4269.47	PASS	AB=0.954;AC=35;AF=0.625;AN=56;BaseQRankSum=5.966;DP=488;FS=6.842;HRun=0;HaplotypeScore=159.2202;InbreedingCoeff=-0.1178;MQ=61.85;MQ0=0;MQRankSum=-3.034;QD=10.07;ReadPosRankSum=12.328;VQSLOD=2.1612;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:26,1:27:51.71:209,0,52	1/1:12,0:12:12.14:108,12,0	0/0:7,0:6:17.83:0,18,185	0/0:14,0:14:24.95:0,25,301	1/1:18,2:20:51.22:323,51,0	1/1:17,0:17:19.91:234,20,0	0/1:23,1:24:88.13:191,0,88	0/0:42,0:42:86.33:0,86,440	0/1:13,1:14:14.86:165,0,15	0/1:18,1:19:40.16:164,0,40	0/1:14,1:15:12.16:148,0,12	1/1:9,0:9:17.21:129,17,0	1/1:19,0:19:26.01:233,26,0	1/1:20,0:20:16.31:191,16,0	0/1:13,0:13:3.37:98,0,3	0/1:16,0:16:20.01:101,0,20	1/1:24,0:24:28.65:218,29,0	0/1:18,1:19:28.52:146,0,29	0/1:24,0:24:56.88:133,0,57	0/1:17,1:18:47.98:159,0,48	0/1:14,1:15:29.22:97,0,29	0/1:9,1:10:24.09:109,0,24	1/1:13,1:13:30.19:174,30,0	0/1:8,0:8:13.23:24,0,13	0/1:11,3:14:9.31:221,0,9	1/1:24,2:26:36.27:336,36,0	1/1:22,1:23:19.73:338,20,0	0/1:4,0:4:15.24:20,0,15
chr10	19876762	.	C	CT	2234.55	PASS	AB=0.762;AC=10;AF=0.179;AN=56;BaseQRankSum=-11.377;DP=595;FS=0.429;HRun=11;HaplotypeScore=59.2319;InbreedingCoeff=0.7759;MQ=66.55;MQ0=0;MQRankSum=1.200;QD=16.55;ReadPosRankSum=-2.216;VQSLOD=3.6229;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,1:17:24.60:0,25,308	0/0:16,0:16:34.65:0,35,260	0/1:10,1:11:21.62:22,0,73	0/0:14,0:12:23.75:0,24,171	0/0:25,0:28:66.80:0,67,497	1/1:2,21:24:62.96:623,63,0	0/1:7,15:22:1.39:351,0,1	1/1:16,22:39:42.31:594,42,0	1/1:2,18:20:51.08:510,51,0	0/0:17,0:17:15.38:0,15,235	0/0:13,0:13:32.85:0,33,255	0/0:25,1:27:25.06:0,25,357	0/0:18,0:18:14.32:0,14,249	0/0:13,0:13:30.75:0,31,234	1/1:3,13:17:28.97:303,29,0	0/0:21,2:22:3.92:0,4,386	0/0:27,0:28:64.60:0,65,484	0/0:22,0:23:47.77:0,48,368	0/0:18,1:19:20.35:0,20,341	0/0:36,0:36:87.30:0,87,668	0/0:13,0:16:32.98:0,33,227	0/0:12,0:12:32.86:0,33,253	0/0:22,1:23:29.31:0,29,410	0/0:15,0:15:31.68:0,32,237	0/0:18,0:18:41.81:0,42,325	0/0:30,0:30:74.69:0,75,580	0/0:38,0:40:87.66:0,88,659	0/0:12,0:12:26.71:0,27,199
chr10	19878438	.	GA	G	3938.08	PASS	AB=0.766;AC=38;AF=0.679;AN=56;BaseQRankSum=6.744;DP=682;FS=1.206;HRun=15;HaplotypeScore=90.9514;InbreedingCoeff=0.2949;MQ=72.77;MQ0=0;MQRankSum=-0.370;QD=6.73;ReadPosRankSum=4.003;VQSLOD=3.0782;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:29,5:36:4.57:5,0,525	0/1:10,1:11:1.27:1,0,114	0/1:33,1:19:14.80:15,0,24	0/0:27,0:20:7.97:0,8,53	0/0:25,1:27:43.55:0,44,493	1/1:4,3:24:37.34:140,37,0	1/1:1,1:20:37.58:119,38,0	1/1:11,18:29:30.12:318,30,0	1/1:7,1:22:27.30:90,27,0	1/1:20,11:33:3:207,3,0	0/1:8,20:30:1.97:343,0,2	1/1:11,12:26:44.35:266,44,0	1/1:6,12:19:21.04:233,21,0	1/1:6,10:18:6.87:141,7,0	1/1:7,1:18:21.41:73,21,0	0/1:4,12:16:17.17:157,0,17	1/1:6,21:31:40.67:362,41,0	1/1:5,10:18:12.27:183,12,0	0/1:11,10:22:3.93:143,0,4	0/1:15,12:29:2.13:201,0,2	0/1:7,5:12:2.94:94,0,3	1/1:8,19:27:44.13:314,44,0	1/1:11,18:30:17.42:225,17,0	1/1:7,17:25:2.49:260,2,0	0/0:23,1:25:36.79:0,37,456	0/0:18,0:18:32.96:0,33,281	0/1:35,6:41:4.64:5,0,462	0/1:11,3:14:43.94:44,0,129
chr10	19881022	.	TATC	T	13291.50	PASS	AB=0.921;AC=29;AF=0.518;AN=56;BaseQRankSum=18.310;DP=686;FS=0.935;HRun=0;HaplotypeScore=100.2933;InbreedingCoeff=0.9231;MQ=73.97;MQ0=0;MQRankSum=-3.039;QD=35.83;ReadPosRankSum=3.293;VQSLOD=5.2697;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:33.11:0,33,720	0/0:11,0:11:30.10:0,30,640	0/0:14,0:14:30.10:0,30,527	0/0:14,0:14:33.10:0,33,621	0/0:34,0:34:96.28:0,96,1957	0/0:44,0:44:99:0,126,2670	0/0:23,0:23:63.22:0,63,1377	0/0:28,0:28:60.21:0,60,1299	0/0:29,0:29:81.28:0,81,1769	1/1:1,25:26:75.24:1166,75,0	1/1:3,19:22:57.15:873,57,0	1/1:0,27:27:78.23:1210,78,0	1/1:0,27:27:72.21:1114,72,0	1/1:3,32:35:87.30:1372,87,0	0/0:35,0:35:99:0,102,2168	1/1:2,29:31:12.67:1123,13,0	1/1:2,12:14:30.10:475,30,0	1/1:3,11:14:24.08:380,24,0	1/1:6,15:21:45.10:638,45,0	1/1:4,30:34:81.28:1274,81,0	1/1:1,14:15:36.12:571,36,0	1/1:3,18:21:57.19:903,57,0	1/1:0,29:29:84.29:1331,84,0	1/1:1,19:20:51.17:809,51,0	0/0:28,0:28:84.29:0,84,1821	0/1:32,3:35:52.40:52,0,1632	0/0:36,0:36:99:0,99,2121	0/0:7,0:7:18.06:0,18,393
chr10	19882052	.	TA	T	1465.42	PASS	AB=0.895;AC=20;AF=0.357;AN=56;BaseQRankSum=6.243;DP=564;FS=5.350;HRun=14;HaplotypeScore=70.7541;InbreedingCoeff=0.4993;MQ=73.32;MQ0=0;MQRankSum=0.241;QD=6.03;ReadPosRankSum=4.679;VQSLOD=2.5987;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,19:30:58.65:373,59,0	1/1:2,6:8:17.85:123,18,0	0/0:14,0:13:2.89:0,3,90	0/1:12,0:13:4.73:5,0,83	1/1:13,7:21:24.52:154,25,0	0/0:19,1:23:41.82:0,42,361	0/0:12,0:13:29.30:0,29,232	0/0:24,0:42:78.92:0,79,526	0/0:15,2:17:9.38:0,9,206	0/0:26,0:27:47.86:0,48,421	0/0:23,0:24:32.14:0,32,316	0/0:18,0:18:26.92:0,27,228	0/0:18,0:18:36.02:0,36,327	0/0:13,0:17:16.99:0,17,163	0/1:17,2:20:25.69:26,0,193	0/0:27,1:28:37.71:0,38,476	0/1:16,3:20:19.88:20,0,248	0/0:10,1:14:3.28:0,3,161	0/0:22,0:22:30.03:0,30,279	0/1:18,1:20:23.38:23,0,136	0/1:8,1:9:5.58:6,0,92	0/0:16,1:17:6.37:0,6,186	0/0:26,0:26:42.82:0,43,377	0/1:18,3:22:11.98:12,0,208	1/1:3,13:18:15.48:214,15,0	1/1:5,6:12:19.83:128,20,0	1/1:10,23:33:58.79:409,59,0	1/1:7,8:16:25.72:168,26,0
chr10	19883378	.	G	GCT	852.74	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-5.587;DP=497;FS=8.616;HRun=0;HaplotypeScore=69.8226;InbreedingCoeff=0.9125;MQ=78.33;MQ0=2;MQRankSum=0.369;QD=32.80;ReadPosRankSum=-5.435;VQSLOD=3.6238;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:61.48:0,61,785	0/0:8,0:8:15.04:0,15,180	0/0:24,0:23:34.28:0,34,374	0/0:29,0:22:22.91:0,23,293	0/0:25,0:26:66.03:0,66,788	0/0:21,0:21:57.18:0,57,713	0/0:16,0:16:39.12:0,39,476	1/1:5,20:26:63.17:948,63,0	0/0:12,0:12:33.09:0,33,400	0/0:13,0:14:35.95:0,36,426	0/0:25,0:25:69.19:0,69,837	0/0:5,0:5:12.04:0,12,150	0/0:11,0:11:30.09:0,30,363	0/0:9,0:9:21.07:0,21,263	0/0:10,0:10:26.95:0,27,315	0/0:13,0:13:33.11:0,33,413	0/0:27,0:29:68.84:0,69,787	0/0:20,0:20:54.15:0,54,660	0/0:27,0:27:60.18:0,60,739	0/0:21,0:22:44.97:0,45,537	0/0:8,0:8:18.04:0,18,211	0/0:10,0:11:26.92:0,27,314	0/0:20,0:20:45.10:0,45,532	0/0:15,0:15:36.11:0,36,450	0/0:19,0:19:57.18:0,57,713	0/0:17,0:17:39.11:0,39,477	0/0:26,0:26:69.21:0,69,851	0/0:7,0:7:12.04:0,12,150
chr10	19883450	.	T	TA	8012.25	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-13.656;DP=529;FS=11.900;HRun=7;HaplotypeScore=53.6108;InbreedingCoeff=0.9975;MQ=73.51;MQ0=2;MQRankSum=-2.445;QD=31.54;ReadPosRankSum=4.093;VQSLOD=4.2049;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:87.14:0,87,840	0/0:8,0:8:18.02:0,18,174	0/0:21,0:19:42.37:0,42,412	0/0:28,0:26:32.65:0,33,444	0/0:18,0:19:53.12:0,53,498	0/0:25,0:25:63.09:0,63,608	0/0:18,0:18:48.08:0,48,463	0/0:37,0:37:96.13:0,96,921	0/0:12,0:12:33.05:0,33,319	1/1:2,18:20:54.17:652,54,0	1/1:0,16:16:42.09:491,42,0	1/1:0,10:10:24.07:290,24,0	1/1:2,21:23:60.61:757,61,0	1/1:0,12:12:30.09:362,30,0	0/0:13,0:13:39.06:0,39,376	1/1:0,14:14:42.13:507,42,0	1/1:8,26:34:75.19:889,75,0	1/1:2,15:17:45.14:544,45,0	1/1:1,26:27:78.21:919,78,0	1/1:0,12:12:30.09:362,30,0	1/1:1,20:21:54.17:652,54,0	1/1:1,18:19:54.12:636,54,0	1/1:1,12:13:36.11:435,36,0	1/1:1,15:16:19.17:515,19,0	0/0:12,0:12:36.06:0,36,348	0/0:14,0:13:36.05:0,36,348	0/0:22,0:22:54.08:0,54,521	0/0:13,0:13:39.06:0,39,376
chr10	19884818	.	TTCTCTC	T	825.47	PASS	AB=1.000;AC=13;AF=0.342;AN=38;BaseQRankSum=-1.177;DP=545;FS=12.974;HRun=0;HaplotypeScore=110.2264;InbreedingCoeff=0.6773;MQ=71.08;MQ0=12;MQRankSum=1.892;QD=6.35;ReadPosRankSum=1.892;VQSLOD=1.4341;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:23:15.03:240,15,0	./.	./.	./.	./.	0/0:17,0:17:6:0,6,92	1/1:15,0:15:5.89:37,6,0	./.	0/0:22,0:22:21.07:0,21,507	0/0:23,0:23:20.08:0,20,342	./.	0/0:19,0:19:12.50:0,12,247	0/0:19,0:19:11.94:0,12,209	0/0:13,0:13:9.03:0,9,201	0/0:15,0:15:7.56:0,8,78	0/0:21,0:21:6.01:0,6,120	0/0:18,0:16:7.79:0,8,105	0/0:19,0:18:6.02:0,6,118	0/0:14,0:14:9.03:0,9,181	./.	0/1:18,0:17:3.87:23,0,4	./.	./.	0/0:17,0:17:24.08:0,24,493	1/1:17,0:16:5.91:119,6,0	1/1:19,0:18:11.55:211,12,0	1/1:24,1:24:15.05:284,15,0	1/1:6,5:11:3.01:56,3,0
chr10	19884868	.	CTGTGTGTGTGTGTGTGTGTGTGTGTA	C	1306.23	PASS	AB=0.876;AC=20;AF=0.435;AN=46;BaseQRankSum=1.098;DP=437;FS=19.029;HRun=0;HaplotypeScore=161.6421;InbreedingCoeff=0.1920;MQ=39.34;MQ0=68;MQRankSum=0.745;QD=5.63;ReadPosRankSum=3.084;VQSLOD=1.5967;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:23:3.18:12,3,0	0/0:0,7:7:0:0,0,0	./.	./.	./.	0/1:5,0:18:9.25:366,0,9	0/0:26,0:21:0.41:0,0,17	1/1:10,0:15:17.62:111,18,0	1/1:16,0:15:5.98:48,6,0	0/0:16,0:16:19.58:0,20,689	0/0:7,0:6:0.47:0,0,1	0/1:18,0:17:46.77:47,0,412	0/0:17,0:15:3.01:0,3,108	0/1:11,0:10:16.90:17,0,65	./.	0/0:16,0:15:2.49:0,2,106	0/1:17,0:12:8.62:9,0,329	0/0:12,0:9:3.01:0,3,57	0/0:13,0:9:3.12:0,3,717	0/0:13,0:7:3.48:0,3,44	0/0:20,0:13:0.69:0,1,1	./.	1/1:13,0:12:0.47:1,0,0	0/1:26,0:22:25.80:26,0,934	0/1:8,7:12:0:0,0,0	1/1:9,0:13:17.60:309,18,0	1/1:9,10:16:11.83:435,12,0	1/1:15,0:10:8.87:57,9,0
chr10	19884870	.	GTGTGTGTGTGTGTGTGTGTGTGTA	G	1174.67	PASS	AB=1.000;AC=23;AF=0.479;AN=48;BaseQRankSum=0.676;DP=434;FS=25.547;HRun=0;HaplotypeScore=151.5154;InbreedingCoeff=0.1580;MQ=39.85;MQ0=66;MQRankSum=0.364;QD=4.00;ReadPosRankSum=2.681;VQSLOD=1.0052;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:12,16:24:3.18:11,3,0	0/0:7,0:7:0:0,0,0	./.	./.	./.	0/1:19,0:18:8.30:332,0,8	1/1:26,0:21:0.13:4,0,0	1/1:19,0:15:15.71:101,16,0	1/1:15,0:14:6.87:48,7,0	0/0:16,0:16:18.90:0,19,532	0/0:7,0:6:0.47:0,0,1	0/1:19,0:18:43.85:44,0,428	0/0:16,0:14:3.01:0,3,90	0/1:9,0:8:16.90:17,0,40	./.	0/0:16,0:15:2.54:0,3,88	0/1:15,0:11:8.98:9,0,294	0/1:13,0:11:7.65:8,0,30	0/0:13,0:9:3.06:0,3,582	0/0:13,0:7:3.47:0,3,28	0/0:21,0:14:0.70:0,1,1	0/1:27,0:22:0.02:0,0,0	0/1:12,0:11:0:1,0,0	0/1:27,0:23:23.35:23,0,931	0/1:15,0:12:0:0,0,0	1/1:17,0:13:15.70:252,16,0	1/1:18,0:16:11.83:397,12,0	1/1:15,0:10:8.87:57,9,0
chr10	19884882	.	GTGTGTGTGTGTA	G	1726.73	PASS	AB=0.931;AC=40;AF=0.870;AN=46;BaseQRankSum=-1.008;DP=429;FS=1.655;HRun=0;HaplotypeScore=115.4836;InbreedingCoeff=-0.0248;MQ=40.42;MQ0=64;MQRankSum=0.729;QD=4.40;ReadPosRankSum=0.565;VQSLOD=2.0981;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:23:2.78:11,3,0	0/1:7,0:7:0.01:0,0,0	./.	./.	./.	0/1:17,0:16:5.06:150,0,5	1/1:25,0:20:3.93:25,4,0	1/1:18,0:13:14.82:98,15,0	1/1:13,0:13:6.45:48,6,0	1/1:18,0:18:10.54:242,11,0	1/1:8,0:7:2.92:23,3,0	1/1:22,0:21:30.03:265,30,0	1/1:16,0:14:2.74:18,3,0	1/1:13,0:10:11.91:87,12,0	./.	1/1:17,0:16:2.96:19,3,0	0/1:15,0:11:13.48:13,0,82	1/1:13,0:11:5.18:26,5,0	0/1:12,0:9:69.12:69,0,74	1/1:10,2:7:5.79:80,6,0	1/1:21,0:15:5.73:42,6,0	0/1:8,19:23:0:0,0,0	1/1:14,0:13:2.99:24,3,0	0/1:29,0:25:6.46:118,0,6	./.	1/1:17,0:13:17.88:208,18,0	1/1:16,0:13:11.83:205,12,0	1/1:15,0:10:8.87:57,9,0
chr10	19884884	.	GTGTGTGTGTA	G	2246.13	PASS	AB=0.984;AC=42;AF=0.875;AN=48;BaseQRankSum=-2.007;DP=424;FS=0.000;HRun=0;HaplotypeScore=106.8688;InbreedingCoeff=0.0689;MQ=40.43;MQ0=65;MQRankSum=1.478;QD=5.62;ReadPosRankSum=-0.597;VQSLOD=1.9087;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:23:2.61:11,3,0	0/1:7,0:7:0:0,0,0	./.	./.	./.	0/1:17,0:16:4.65:122,0,5	1/1:22,0:17:3.38:20,3,0	1/1:18,0:13:14.82:98,15,0	1/1:13,0:13:6.87:48,7,0	1/1:5,13:18:30:330,30,0	1/1:7,1:7:2.92:23,3,0	1/1:20,0:19:35.89:423,36,0	1/1:5,11:14:2.78:17,3,0	1/1:13,0:10:11.91:87,12,0	./.	1/1:3,14:16:3.01:37,3,0	0/1:14,1:11:27.46:27,0,62	1/1:4,9:11:4.99:25,5,0	0/1:13,0:10:47.56:144,0,48	1/1:12,0:7:5.90:86,6,0	1/1:21,0:15:5.36:41,5,0	0/1:26,1:23:0:0,0,0	1/1:15,0:14:5.98:48,6,0	1/1:28,0:24:33.40:302,33,0	0/1:11,0:9:0:0,0,0	1/1:17,0:13:17.88:220,18,0	1/1:16,0:13:11.83:177,12,0	1/1:16,0:10:8.87:57,9,0
chr10	19884886	.	GTGTGTGTA	G	2593.42	PASS	AB=0.988;AC=41;AF=0.854;AN=48;BaseQRankSum=-1.723;DP=414;FS=0.000;HRun=0;HaplotypeScore=98.9468;InbreedingCoeff=0.0703;MQ=40.47;MQ0=63;MQRankSum=2.056;QD=6.81;ReadPosRankSum=-1.745;VQSLOD=1.6759;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:21:2.13:10,2,0	0/1:7,0:7:0:0,0,0	./.	./.	./.	0/1:16,0:15:4.44:94,0,4	1/1:22,0:17:1.95:17,2,0	1/1:16,0:11:14.82:98,15,0	1/1:13,0:13:6.87:49,7,0	1/1:18,0:18:33.01:363,33,0	1/1:7,1:7:2.92:23,3,0	1/1:20,0:19:35.90:552,36,0	1/1:16,0:14:2.94:18,3,0	1/1:13,0:10:11.91:87,12,0	./.	1/1:17,0:16:2.98:21,3,0	0/1:14,0:11:27.55:28,0,44	1/1:13,0:11:4.99:24,5,0	0/1:13,0:10:26.88:168,0,27	1/1:11,1:8:5.48:92,5,0	1/1:20,0:15:5.40:41,5,0	0/1:26,0:22:0:0,0,0	1/1:5,11:15:8.97:71,9,0	1/1:29,0:25:39.04:514,39,0	0/0:11,0:9:0:0,0,0	1/1:14,0:10:17.88:216,18,0	1/1:16,0:13:11.83:149,12,0	1/1:16,0:10:8.87:57,9,0
chr10	19890758	.	CG	C	1765.18	PASS	AB=1.000;AC=38;AF=0.950;AN=40;BaseQRankSum=-1.612;DP=211;FS=7.104;HRun=4;HaplotypeScore=20.0525;InbreedingCoeff=-0.1010;MQ=43.54;MQ0=44;MQRankSum=-2.274;QD=10.38;ReadPosRankSum=1.965;VQSLOD=0.4172;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,5:1:3.01:36,3,0	1/1:1,5:6:9.03:105,9,0	0/1:15,0:4:14.81:32,0,15	0/1:15,0:3:9.85:10,0,18	1/1:1,2:2:3.01:36,3,0	1/1:3,8:2:3.01:36,3,0	./.	./.	./.	1/1:0,9:8:18:215,18,0	1/1:0,6:6:12.04:144,12,0	1/1:3,12:4:9.03:105,9,0	1/1:2,10:6:12.04:143,12,0	1/1:1,10:4:6.02:72,6,0	./.	1/1:1,7:3:9.03:107,9,0	./.	1/1:5,3:3:6.02:72,6,0	./.	1/1:1,4:4:3.01:36,3,0	./.	1/1:1,4:5:12.04:140,12,0	1/1:2,3:3:6.02:72,6,0	1/1:0,3:1:3.01:36,3,0	1/1:2,6:6:12.04:140,12,0	1/1:2,13:7:18.06:215,18,0	./.	1/1:0,3:3:9.03:108,9,0
chr10	19896374	.	T	TG	6626.71	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-15.177;DP=534;FS=6.780;HRun=4;HaplotypeScore=47.3504;InbreedingCoeff=0.9712;MQ=80.47;MQ0=0;MQRankSum=-1.017;QD=36.82;ReadPosRankSum=3.803;VQSLOD=4.8653;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,19:19:54.18:738,54,0	1/1:0,1:1:3.01:41,3,0	0/0:14,0:13:36.10:0,36,405	0/0:14,0:14:35.77:0,36,385	1/1:1,27:27:75.25:1021,75,0	1/1:1,20:21:60.20:821,60,0	1/1:1,9:10:27.09:369,27,0	0/0:19,0:19:51.15:0,51,578	0/0:25,0:25:75.21:0,75,850	0/0:20,0:20:60.17:0,60,680	0/0:28,0:28:81.22:0,81,911	0/0:19,0:19:51.13:0,51,569	0/0:23,0:23:63.01:0,63,695	0/0:10,0:10:27.02:0,27,283	1/1:0,18:18:54.18:738,54,0	0/0:19,1:20:16.12:0,16,562	0/0:16,0:16:45.13:0,45,510	0/0:18,0:18:48.12:0,48,533	0/0:17,0:17:45.13:0,45,510	0/0:33,0:33:93.27:0,93,1055	0/0:12,0:12:30.08:0,30,332	0/0:13,0:13:39.10:0,39,432	0/0:39,0:39:99:0,105,1191	0/0:14,0:14:39.11:0,39,442	1/1:1,24:25:66.22:903,66,0	1/1:3,19:22:23.12:683,23,0	1/1:2,12:14:33.11:451,33,0	1/1:1,21:22:63.21:862,63,0
chr10	19897067	.	A	AT	5782.53	PASS	AB=0.543;AC=17;AF=0.304;AN=56;BaseQRankSum=-13.915;DP=627;FS=1.087;HRun=9;HaplotypeScore=59.6780;InbreedingCoeff=0.9291;MQ=83.50;MQ0=0;MQRankSum=-4.914;QD=24.40;ReadPosRankSum=1.273;VQSLOD=5.6654;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,22:25:57.15:631,57,0	1/1:0,7:7:15.04:166,15,0	0/0:22,0:21:35.68:0,36,281	0/0:24,0:21:43.50:0,43,356	1/1:7,30:37:39.07:831,39,0	1/1:3,31:32:58.17:870,58,0	1/1:1,23:24:60.16:664,60,0	0/0:25,0:25:56.94:0,57,489	0/0:30,0:30:77.98:0,78,677	0/0:19,0:19:47.78:0,48,404	0/0:23,0:23:59.96:0,60,517	0/0:17,0:17:44.98:0,45,391	0/0:22,0:22:59.99:0,60,521	0/0:22,0:22:59.98:0,60,521	0/0:20,0:20:53.96:0,54,465	0/0:12,0:12:35.99:0,36,313	0/0:21,0:21:56.95:0,57,485	0/0:24,0:24:62.98:0,63,547	0/0:18,0:19:47.03:0,47,397	0/0:24,0:24:65.99:0,66,573	0/0:18,0:18:44.99:0,45,391	0/0:12,0:12:32.99:0,33,286	0/0:17,0:17:19.40:0,19,362	0/0:19,0:19:53.98:0,54,468	1/1:2,10:12:27.07:299,27,0	0/1:4,21:25:6:613,0,6	1/1:7,32:39:83.26:913,83,0	1/1:4,30:34:72.19:796,72,0
chr10	19897222	.	G	GT	26993.71	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=4.310;DP=696;FS=11.703;HRun=1;HaplotypeScore=97.4072;InbreedingCoeff=0.9992;MQ=91.22;MQ0=0;MQRankSum=-8.852;QD=44.32;ReadPosRankSum=4.533;VQSLOD=3.2113;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,34:36:99:1582,99,0	1/1:0,9:9:24.08:384,24,0	0/0:34,0:34:90.29:0,90,1230	0/0:25,0:25:66.17:0,66,888	1/1:0,27:27:75.26:1199,75,0	1/1:0,28:28:69.24:1103,69,0	1/1:1,17:18:51.17:815,51,0	1/1:0,29:29:87.30:1387,87,0	1/1:0,27:27:75.26:1199,75,0	1/1:0,35:35:99:1679,105,0	1/1:2,17:19:54.18:853,54,0	1/1:0,27:27:78.27:1247,78,0	1/1:0,23:23:60.20:959,60,0	1/1:0,27:27:72.25:1151,72,0	0/0:28,0:28:81.27:0,81,1133	1/1:0,25:25:75.26:1199,75,0	1/1:3,32:35:90.31:1438,90,0	1/1:0,21:21:51.17:815,51,0	1/1:1,12:13:36.12:576,36,0	1/1:0,31:31:93.32:1484,93,0	1/1:0,17:17:48.16:767,48,0	1/1:2,23:25:66.22:1041,66,0	1/1:0,23:23:69.24:1103,69,0	1/1:1,20:21:60.20:959,60,0	1/1:1,26:27:66.23:1055,66,0	1/1:1,26:27:78.25:1223,78,0	1/1:0,22:22:60.20:959,60,0	1/1:0,17:17:51.17:815,51,0
chr10	19897592	.	A	AGT	1643.44	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.784;DP=1078;FS=16.882;HRun=0;HaplotypeScore=173.3383;InbreedingCoeff=0.9678;MQ=54.29;MQ0=17;MQRankSum=-7.866;QD=18.68;ReadPosRankSum=-5.012;VQSLOD=1.7033;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:56:99:0,145,1775	0/0:11,0:11:33.09:0,33,406	0/0:30,0:6:8.73:0,9,88	0/0:48,0:13:26.63:0,27,265	0/0:21,0:21:57.18:0,57,721	0/0:33,0:33:84.06:0,84,1041	0/0:31,0:31:69.08:0,69,853	1/1:34,9:41:60.12:843,60,0	1/1:22,22:45:27.54:922,28,0	0/0:44,0:44:99:0,102,1296	0/0:26,0:26:63.20:0,63,801	0/0:56,0:56:99:0,113,1448	0/0:50,0:50:99:0,126,1588	0/0:49,1:50:60.66:0,61,1286	0/0:61,0:61:99:0,156,1922	0/0:51,1:52:82.05:0,82,1570	0/0:22,0:22:46.80:0,47,641	0/0:32,0:32:64.46:0,64,827	0/0:26,0:24:48.15:0,48,607	0/0:30,0:30:78.17:0,78,992	0/0:99,0:98:99:0,191,2378	0/0:30,0:30:66.18:0,66,838	0/0:37,0:37:96.29:0,96,1205	0/0:39,0:39:45.24:0,45,656	0/0:25,0:25:72.23:0,72,915	0/0:40,0:40:99:0,102,1274	0/0:27,0:27:72.06:0,72,889	0/0:14,0:14:36.12:0,36,457
chr10	19897608	.	AGT	A	1313.41	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.555;DP=1049;FS=3.371;HRun=0;HaplotypeScore=172.0707;InbreedingCoeff=0.9736;MQ=55.84;MQ0=17;MQRankSum=-4.376;QD=16.63;ReadPosRankSum=-5.741;VQSLOD=1.9438;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,113,1886	0/0:11,0:11:30.10:0,30,497	0/0:43,0:9:15.70:0,16,214	0/0:55,0:18:26.03:0,26,389	0/0:23,0:23:63.20:0,63,1028	0/0:34,0:34:70.50:0,71,1201	0/0:34,1:35:24.96:0,25,936	1/1:12,22:32:63.14:775,63,0	1/1:9,36:45:54.19:660,54,0	0/0:36,0:36:99:0,99,1635	0/0:25,0:25:66.21:0,66,1076	0/0:47,0:47:99:0,106,1697	0/0:52,0:52:99:0,114,1789	0/0:48,1:49:63.86:0,64,1612	0/0:55,2:57:74.14:0,74,2320	0/0:54,1:55:99:0,129,2156	0/0:23,0:23:11.48:0,11,686	0/0:28,0:28:60.21:0,60,1003	0/0:21,0:21:48.04:0,48,689	0/0:30,1:31:30.97:0,31,1026	0/0:86,2:88:75.12:0,75,2592	0/0:23,0:23:48.09:0,48,774	0/0:36,0:36:90.23:0,90,1409	0/0:35,1:36:51.13:0,51,852	0/0:27,0:27:81.26:0,81,1330	0/0:38,1:39:55.11:0,55,1428	0/0:26,0:25:66.21:0,66,1074	0/0:15,0:15:39.13:0,39,639
chr10	19897665	.	A	ATG	7008.43	PASS	AB=0.767;AC=29;AF=0.518;AN=56;BaseQRankSum=-2.203;DP=920;FS=26.629;HRun=0;HaplotypeScore=210.3246;InbreedingCoeff=0.7776;MQ=54.11;MQ0=7;MQRankSum=0.047;QD=13.45;ReadPosRankSum=0.859;VQSLOD=3.1125;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:32.68:0,33,884	0/0:11,0:10:21.15:0,21,293	0/0:35,0:17:15.02:0,15,169	0/0:51,0:28:38.66:0,39,428	0/0:31,0:31:78.21:0,78,929	1/1:9,0:27:2.92:17,3,0	0/1:9,0:32:1.68:2,0,23	0/0:16,0:50:3.38:0,3,190	0/0:13,0:43:11.44:0,11,170	1/1:12,22:34:56.41:1120,56,0	1/1:16,5:21:44.58:687,45,0	1/1:10,20:30:28.90:400,29,0	1/1:9,26:34:44.58:684,45,0	1/1:19,30:49:33.90:610,34,0	0/0:35,1:36:71.89:0,72,834	1/1:18,22:40:30.46:544,30,0	1/1:10,20:30:32.74:411,33,0	0/1:15,11:26:7.96:198,0,8	1/1:4,8:12:21.07:326,21,0	1/1:10,21:31:11.42:188,11,0	1/1:25,51:74:40.54:639,41,0	1/1:5,14:19:11.86:198,12,0	1/1:13,6:19:35.62:588,36,0	0/1:13,27:40:5.01:397,0,5	0/0:21,0:21:51.12:0,51,617	0/0:31,0:29:59.93:0,60,688	0/0:19,0:18:41.99:0,42,571	0/0:17,0:17:37.92:0,38,460
chr10	19897677	.	GTA	G	1511.23	PASS	AB=0.961;AC=21;AF=0.375;AN=56;BaseQRankSum=10.077;DP=883;FS=28.140;HRun=0;HaplotypeScore=222.2995;InbreedingCoeff=-0.3231;MQ=51.62;MQ0=10;MQRankSum=-2.934;QD=2.42;ReadPosRankSum=-4.166;VQSLOD=0.5702;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:38.21:0,38,1312	0/0:11,0:10:25.54:0,26,430	0/0:27,0:9:13.47:0,13,180	0/0:38,0:16:25.02:0,25,422	0/0:30,0:30:70.72:0,71,1197	1/1:20,0:19:3.50:20,4,0	1/1:29,0:29:13.24:66,13,0	0/1:54,0:51:99:232,0,160	0/1:45,1:46:12.65:231,0,13	0/1:34,0:33:69.16:69,0,447	0/1:23,1:24:31.97:32,0,238	0/1:32,5:37:90.75:229,0,91	0/1:32,3:34:99:103,0,161	0/1:43,4:47:99:129,0,149	0/0:34,0:34:62.14:0,62,1204	0/1:31,2:34:99:128,0,163	0/1:31,1:32:46.89:47,0,101	0/1:19,1:20:46.67:54,0,47	0/1:11,0:10:35.75:78,0,36	0/1:26,1:27:18.94:35,0,19	0/1:70,1:68:99:99,0,133	0/1:17,1:18:28.73:29,0,54	0/1:22,1:23:70.62:71,0,170	0/1:41,0:41:12.02:12,0,213	0/0:19,0:19:51.14:0,51,943	0/0:31,0:30:44.96:0,45,1049	0/1:20,1:20:15.75:16,0,773	0/0:18,0:17:29.30:0,29,720
chr10	19897684	.	TGA	T	1471.06	PASS	AB=0.985;AC=23;AF=0.411;AN=56;BaseQRankSum=6.822;DP=864;FS=28.822;HRun=0;HaplotypeScore=217.7977;InbreedingCoeff=-0.4072;MQ=50.52;MQ0=15;MQRankSum=-1.318;QD=2.29;ReadPosRankSum=-1.070;VQSLOD=1.2985;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:22.89:0,23,785	0/0:11,0:10:16.36:0,16,267	0/1:23,0:5:1.83:2,0,33	0/1:32,0:10:15.75:16,0,52	0/0:25,1:26:8.49:0,8,534	1/1:21,0:20:5.26:42,5,0	1/1:29,1:29:14.39:111,14,0	0/0:53,0:49:62.68:0,63,684	0/1:50,0:50:31.76:32,0,133	0/1:37,0:35:99:143,0,329	0/1:25,0:25:99:147,0,140	0/1:31,4:34:77.46:231,0,77	0/1:34,0:33:99:151,0,119	0/1:42,3:45:99:135,0,131	0/0:36,0:36:23.09:0,23,801	0/1:34,0:34:97.30:175,0,97	0/1:31,1:32:32.40:32,0,78	0/1:19,0:19:47.79:48,0,76	0/1:8,0:7:32.92:75,0,33	0/1:25,1:26:14.08:37,0,14	0/1:64,1:61:99:100,0,124	0/1:20,0:20:29.90:30,0,49	0/1:22,1:23:63.28:63,0,146	0/1:39,0:38:25.46:25,0,153	0/0:20,0:20:34.39:0,34,445	0/0:28,0:27:22.51:0,23,642	0/1:24,0:23:24.02:24,0,572	0/1:19,0:18:16.67:17,0,495
chr10	19897686	.	AGTGTGT	A	2763.88	PASS	AB=0.848;AC=20;AF=0.370;AN=54;BaseQRankSum=3.770;DP=866;FS=16.953;HRun=0;HaplotypeScore=257.3137;InbreedingCoeff=0.4496;MQ=49.13;MQ0=17;MQRankSum=-2.318;QD=6.40;ReadPosRankSum=-2.510;VQSLOD=0.9204;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:49:71.97:0,72,1560	0/0:10,0:10:21.07:0,21,513	./.	0/0:33,0:11:6:0,6,53	0/0:24,0:25:30.10:0,30,691	0/0:21,0:20:3:0,3,25	0/0:29,0:28:2.37:0,2,9	0/0:55,0:50:7.24:0,7,97	0/1:24,26:50:55.25:270,0,55	0/0:34,0:35:13.84:0,14,446	0/0:24,0:26:34.27:0,34,482	1/1:32,5:36:38.12:595,38,0	1/1:24,9:34:43.96:563,44,0	1/1:35,3:41:30.96:444,31,0	0/0:34,0:34:58.01:0,58,1303	0/1:27,0:34:50.14:53,0,50	0/1:27,1:31:57.26:57,0,102	0/1:16,0:18:36.21:36,0,70	1/1:8,1:8:3.31:59,3,0	0/1:26,2:28:2.91:160,0,3	1/1:60,2:59:5.28:204,5,0	1/1:18,1:21:12.18:153,12,0	0/1:20,3:23:1.71:250,0,2	1/1:36,6:40:8.03:103,8,0	0/0:19,0:20:18.01:0,18,309	0/0:29,0:28:47.70:0,48,895	0/0:23,0:23:51.06:0,51,1144	0/0:20,0:19:38.95:0,39,849
chr10	19898717	.	GA	G	15938.86	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=18.929;DP=653;FS=2.110;HRun=1;HaplotypeScore=124.3852;InbreedingCoeff=0.9976;MQ=80.76;MQ0=0;MQRankSum=-4.007;QD=38.31;ReadPosRankSum=2.686;VQSLOD=4.6091;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:84.24:0,84,1272	0/0:6,0:6:18.06:0,18,281	0/0:16,0:16:45.15:0,45,698	0/0:21,0:20:60.20:0,60,913	0/0:24,0:24:72.25:0,72,1143	0/0:17,0:17:51.17:0,51,815	0/0:16,0:16:45.14:0,45,695	1/1:1,16:17:45.13:611,45,0	1/1:1,22:23:57.19:796,57,0	1/1:0,33:33:99:1362,99,0	1/1:0,22:22:66.22:923,66,0	1/1:0,22:22:60.20:838,60,0	1/1:0,26:26:78.26:1090,78,0	1/1:0,26:26:72.24:1004,72,0	0/0:22,0:22:66.23:0,66,1052	1/1:0,29:29:78.26:1090,78,0	1/1:0,19:19:57.19:797,57,0	1/1:0,12:12:30.10:419,30,0	1/1:0,27:27:81.24:1112,81,0	1/1:0,43:43:99:1579,114,0	1/1:0,30:30:72.24:1007,72,0	1/1:0,29:29:78.26:1090,78,0	1/1:0,39:39:99:1509,108,0	1/1:0,19:19:51.17:712,51,0	0/0:11,0:11:33.11:0,33,525	0/0:34,0:34:99:0,102,1530	0/0:34,0:34:99:0,102,1579	0/0:6,0:6:18.06:0,18,287
chr10	19898830	.	GTT	G	755.05	PASS	AB=0.941;AC=7;AF=0.269;AN=26;BaseQRankSum=2.874;DP=288;FS=1.455;HRun=14;HaplotypeScore=75.0128;InbreedingCoeff=0.6823;MQ=63.19;MQ0=23;MQRankSum=2.081;QD=9.93;ReadPosRankSum=0.804;VQSLOD=2.2732;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:33:73:0,73,881	0/0:3,0:4:8.52:0,9,93	0/1:15,0:8:11.04:11,0,14	0/0:13,0:6:1.25:0,1,4	0/0:28,0:29:55.64:0,56,832	1/1:6,17:26:41.16:451,41,0	1/1:8,17:27:44.43:380,44,0	1/1:4,1:2:3:27,3,0	./.	./.	./.	./.	./.	./.	0/0:20,0:18:38.61:0,39,491	./.	./.	./.	./.	./.	./.	./.	./.	./.	0/0:24,0:27:49.58:0,50,567	0/0:19,0:22:44.09:0,44,526	0/0:31,0:31:54.13:0,54,691	0/0:13,0:13:33.11:0,33,461
chr10	19899362	.	TG	T	10938.98	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=17.288;DP=628;FS=11.085;HRun=1;HaplotypeScore=95.9042;InbreedingCoeff=0.9897;MQ=77.56;MQ0=2;MQRankSum=-0.662;QD=31.71;ReadPosRankSum=3.519;VQSLOD=3.4689;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:63.15:0,63,845	0/0:8,0:8:24.08:0,24,359	0/0:28,0:27:49.55:0,50,782	0/0:34,0:33:86.15:0,86,1066	0/0:32,0:32:93.16:0,93,1277	0/0:23,0:23:69.21:0,69,979	0/0:24,0:24:72.21:0,72,1025	1/1:0,32:31:84.18:998,84,0	1/1:0,17:17:33.11:429,33,0	1/1:0,21:21:63.04:724,63,0	1/1:6,28:34:93.68:1137,94,0	1/1:0,18:18:48.15:614,48,0	1/1:20,2:22:8.66:102,9,0	1/1:1,17:18:51.64:662,52,0	0/0:25,0:25:75.22:0,75,1042	1/1:0,30:30:84.27:1090,84,0	1/1:0,24:24:66.21:849,66,0	1/1:0,9:8:17.70:217,18,0	1/1:1,19:19:57.07:660,57,0	1/1:4,21:23:66.16:821,66,0	1/1:0,12:12:36.12:460,36,0	1/1:6,16:22:56.90:737,57,0	1/1:0,26:26:69.22:894,69,0	1/1:0,14:14:42.14:544,42,0	0/0:15,0:15:45.12:0,45,605	0/0:24,0:24:69.17:0,69,949	0/0:35,0:34:99:0,105,1483	0/0:11,0:11:33.11:0,33,494
chr10	19899364	.	TG	T	10963.20	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=17.493;DP=638;FS=9.569;HRun=1;HaplotypeScore=97.6890;InbreedingCoeff=0.9899;MQ=77.64;MQ0=2;MQRankSum=-1.311;QD=31.41;ReadPosRankSum=3.590;VQSLOD=3.6945;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:66.19:0,66,1008	0/0:9,0:9:27.07:0,27,407	0/0:27,0:26:46.67:0,47,827	0/0:35,0:34:71.33:0,71,1154	0/0:32,0:32:93.32:0,93,1484	0/0:27,0:27:81.21:0,81,1181	0/0:24,0:24:72.23:0,72,1117	1/1:31,0:30:84.19:1002,84,0	1/1:18,0:18:36.11:453,36,0	1/1:18,1:19:55.02:664,55,0	1/1:35,0:35:96.10:1160,96,0	1/1:19,0:19:51.16:643,51,0	1/1:2,20:22:8.68:118,9,0	1/1:20,0:20:52.94:665,53,0	0/0:24,0:24:72.23:0,72,1099	1/1:30,0:30:84.27:1086,84,0	1/1:24,0:24:66.21:856,66,0	1/1:9,0:8:17.71:214,18,0	1/1:21,0:19:57.08:673,57,0	1/1:24,0:22:63.19:801,63,0	1/1:13,0:13:36.12:460,36,0	1/1:23,0:23:56:726,56,0	1/1:27,0:27:70.11:897,70,0	1/1:14,0:14:42.14:544,42,0	0/0:15,0:15:45.13:0,45,684	0/0:24,0:24:72.24:0,72,1101	0/0:35,0:34:99:0,105,1637	0/0:11,0:11:33.11:0,33,527
chr10	19900944	.	AAACTAT	A	18949.95	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=19.672;DP=691;FS=6.001;HRun=0;HaplotypeScore=171.9540;InbreedingCoeff=0.9914;MQ=78.85;MQ0=2;MQRankSum=-19.644;QD=57.42;ReadPosRankSum=2.630;VQSLOD=5.0148;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,144,5175	0/0:7,0:7:21.07:0,21,741	0/0:21,0:21:51.13:0,51,1519	0/0:24,0:24:66.20:0,66,1940	0/0:47,0:47:99:0,135,4647	0/0:24,0:24:72.23:0,72,2478	0/0:24,0:24:72.23:0,72,2451	0/0:37,0:37:99:0,105,3536	0/0:17,0:17:51.18:0,51,1824	1/1:3,31:34:96.32:2192,96,0	1/1:1,31:32:81.15:1838,81,0	1/1:3,21:24:51.18:1214,51,0	1/1:6,23:29:63.22:1514,63,0	1/1:1,26:27:75.26:1802,75,0	0/0:19,0:19:51.16:0,51,1740	1/1:0,29:29:87.30:2089,87,0	1/1:0,15:15:39.13:937,39,0	1/1:0,8:8:9.03:216,9,0	1/1:2,18:20:51.16:1140,51,0	1/1:1,28:29:78.18:1757,78,0	1/1:3,16:17:30.06:668,30,0	1/1:0,23:23:51.13:1173,51,0	1/1:0,27:27:72.25:1691,72,0	1/1:1,13:14:30.10:721,30,0	0/0:16,0:16:48.16:0,48,1731	0/0:29,0:29:84.27:0,84,2808	0/0:24,0:24:72.25:0,72,2565	0/0:24,0:24:72.20:0,72,2345
chr10	19901239	.	T	TAG	3546.92	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-11.017;DP=794;FS=6.381;HRun=0;HaplotypeScore=96.2172;InbreedingCoeff=0.9999;MQ=78.60;MQ0=0;MQRankSum=0.106;QD=54.57;ReadPosRankSum=-3.043;VQSLOD=2.8071;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,99,1610	0/0:13,0:13:39.13:0,39,636	0/0:15,0:15:41.63:0,42,524	0/0:21,0:21:50.78:0,51,669	0/0:38,0:38:99:0,111,1708	0/0:21,0:21:60.18:0,60,931	0/0:27,0:27:75.15:0,75,1073	1/1:2,32:37:99:1963,105,0	1/1:1,27:28:78.27:1584,78,0	0/0:30,0:30:81.24:0,81,1273	0/0:19,0:19:42.09:0,42,631	0/0:30,0:30:90.31:0,90,1468	0/0:40,0:40:99:0,120,1931	0/0:33,0:33:99:0,99,1615	0/0:46,0:46:99:0,138,2108	0/0:42,0:42:99:0,126,2053	0/0:32,0:31:96.33:0,96,1565	0/0:18,0:18:54.12:0,54,826	0/0:20,0:20:60.20:0,60,958	0/0:20,0:20:60.16:0,60,950	0/0:37,0:37:99:0,108,1736	0/0:35,0:35:99:0,102,1513	0/0:30,0:30:90.29:0,90,1443	0/0:18,0:18:54.18:0,54,881	0/0:31,0:31:93.32:0,93,1517	0/0:25,0:25:72.24:0,72,1154	0/0:37,0:37:99:0,105,1682	0/0:16,0:16:42.13:0,42,660
chr10	19902133	.	T	TTGACACTG	55565.76	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-7.421;DP=684;FS=0.000;HRun=0;HaplotypeScore=166.9787;InbreedingCoeff=0.9957;MQ=81.57;MQ0=5;MQRankSum=-14.232;QD=95.31;ReadPosRankSum=1.360;VQSLOD=5.4974;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,18:27:54.19:2303,54,0	1/1:2,8:12:27.09:1156,27,0	0/0:35,0:36:78.57:0,79,2227	0/0:26,0:26:72.18:0,72,1623	1/1:4,18:24:35.70:1305,36,0	1/1:7,17:27:69.24:2862,69,0	1/1:7,13:19:54.19:2324,54,0	1/1:21,18:45:99:4797,120,0	1/1:2,16:20:51.18:2230,51,0	1/1:10,12:27:78.23:2806,78,0	1/1:12,19:32:60.21:2290,60,0	1/1:5,21:27:63.22:2640,63,0	1/1:4,13:21:45.15:1938,45,0	1/1:10,20:33:84.29:3584,84,0	0/0:39,0:39:99:0,114,3136	1/1:3,19:23:63.22:2803,63,0	1/1:7,7:16:30.10:1315,30,0	1/1:3,8:14:27.09:1205,27,0	1/1:3,12:17:48.16:1820,48,0	1/1:9,11:22:48.16:1885,48,0	1/1:8,11:23:32.89:1284,33,0	1/1:5,19:25:66.23:2628,66,0	1/1:5,13:22:45.15:1864,45,0	1/1:7,9:18:18.05:774,18,0	1/1:5,16:21:60.21:2524,60,0	1/1:7,22:31:90.31:3779,90,0	1/1:8,14:23:54.65:2250,55,0	1/1:1,8:9:27.09:1203,27,0
chr10	19903177	.	T	TTATCTATC	6731.49	PASS	AB=1.000;AC=36;AF=0.692;AN=52;BaseQRankSum=-5.537;DP=575;FS=0.542;HRun=0;HaplotypeScore=160.3274;InbreedingCoeff=0.7242;MQ=63.02;MQ0=2;MQRankSum=-1.989;QD=18.14;ReadPosRankSum=-0.826;VQSLOD=3.8824;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:9.03:0,9,178	0/0:8,0:8:9.02:0,9,146	./.	./.	0/0:27,0:27:24.06:0,24,394	1/1:27,0:27:33.08:1001,33,0	1/1:13,0:13:3.01:75,3,0	1/1:38,0:38:5.45:15,5,0	1/1:16,0:16:21.07:294,21,0	1/1:16,0:16:21.07:567,21,0	1/1:18,0:18:33.08:513,33,0	1/1:18,0:18:18.93:254,19,0	1/1:27,0:27:21.02:512,21,0	1/1:19,0:19:21.06:327,21,0	1/1:8,6:16:6.02:243,6,0	1/1:19,0:19:30.06:397,30,0	1/1:23,0:22:31.64:503,32,0	0/1:16,0:16:24.74:25,0,287	1/1:15,0:15:15.05:255,15,0	1/1:32,0:32:44.14:609,44,0	1/1:12,0:12:12.01:137,12,0	1/1:13,0:13:18.03:259,18,0	1/1:24,0:24:48.05:594,48,0	0/1:9,0:9:47.57:152,0,48	0/0:42,0:41:31.15:0,31,906	0/0:25,0:25:35.60:0,36,615	0/0:41,0:39:39.13:0,39,758	0/0:16,0:15:24.08:0,24,471
chr10	19903225	.	CTATT	C	5259.49	PASS	AB=1.000;AC=31;AF=0.554;AN=56;BaseQRankSum=-13.640;DP=525;FS=0.378;HRun=0;HaplotypeScore=126.5216;InbreedingCoeff=-0.3879;MQ=59.39;MQ0=8;MQRankSum=2.313;QD=10.69;ReadPosRankSum=-4.599;VQSLOD=2.9590;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,23:24:11.99:178,12,0	1/1:2,7:9:9.03:143,9,0	0/0:6,0:4:12.03:0,12,136	0/0:7,0:6:18.05:0,18,211	1/1:1,21:22:27.09:442,27,0	0/1:23,0:23:99:130,0,187	0/1:9,0:8:23.69:86,0,24	1/1:32,0:30:41.72:359,42,0	0/1:19,0:19:99:196,0,140	0/1:15,0:15:99:170,0,108	0/1:25,0:25:99:240,0,234	0/1:11,0:11:26.47:26,0,170	0/1:23,0:23:49.26:251,0,49	0/1:15,0:15:99:109,0,166	0/0:20,0:20:39.01:0,39,419	0/1:18,0:18:99:106,0,212	0/1:24,0:23:99:147,0,253	0/1:17,0:17:99:143,0,182	0/1:18,0:16:82.43:207,0,82	0/1:24,0:24:99:118,0,321	0/1:8,0:8:34.97:35,0,65	0/1:14,0:14:99:139,0,146	0/1:24,0:24:99:113,0,293	0/1:12,0:12:87.08:120,0,87	0/1:33,0:33:99:143,0,722	1/1:0,26:26:78.09:1007,78,0	1/1:1,34:34:35.73:635,36,0	0/1:11,0:11:17.90:18,0,315
chr10	19903228	.	T	TC	657.57	PASS	AB=0.801;AC=12;AF=0.214;AN=56;BaseQRankSum=9.598;DP=517;FS=2.733;HRun=0;HaplotypeScore=116.4641;InbreedingCoeff=-0.2788;MQ=60.97;MQ0=6;MQRankSum=-1.272;QD=2.87;ReadPosRankSum=1.173;VQSLOD=3.3585;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:11:0,11,53	0/0:8,0:8:11.34:0,11,85	0/0:6,0:4:12.04:0,12,168	0/0:9,0:8:21.07:0,21,291	0/0:22,0:22:27.83:0,28,161	0/1:17,6:23:57.68:58,0,93	0/0:9,0:8:12.94:0,13,66	0/0:28,0:26:74.05:0,74,458	0/1:13,6:19:68.21:68,0,120	0/0:13,2:15:9.79:0,10,141	0/1:20,5:25:71.25:71,0,186	0/1:6,5:11:33.15:70,0,33	0/1:20,2:22:3.51:4,0,141	0/1:10,4:14:60.36:87,0,60	0/0:18,0:18:34.01:0,34,442	0/1:13,4:17:71.51:72,0,79	0/1:20,4:23:68.39:68,0,107	0/0:16,0:16:41.38:0,41,209	0/1:16,3:18:49.47:49,0,82	0/1:14,8:22:82.34:134,0,82	0/1:6,2:8:20.82:21,0,48	0/0:16,0:16:36.23:0,36,186	0/1:18,7:25:99:104,0,134	0/0:12,0:12:6.80:0,7,91	0/0:32,0:32:88.23:0,88,427	0/0:26,0:26:71.78:0,72,325	0/0:35,0:33:35.15:0,35,173	0/0:12,0:12:31.45:0,31,163
chr10	19903229	.	T	TATC	2781.32	PASS	AB=0.851;AC=17;AF=0.304;AN=56;BaseQRankSum=6.357;DP=509;FS=0.000;HRun=0;HaplotypeScore=125.0085;InbreedingCoeff=-0.4427;MQ=62.12;MQ0=5;MQRankSum=-0.594;QD=9.66;ReadPosRankSum=-1.381;VQSLOD=2.7871;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:11.95:0,12,91	0/0:8,0:8:11.97:0,12,114	0/0:7,0:5:12.04:0,12,223	0/0:9,0:8:23.99:0,24,385	0/0:22,0:22:29.88:0,30,250	0/1:16,0:22:99:195,0,128	0/1:9,0:8:34.99:35,0,65	0/0:25,0:23:14.43:0,14,359	0/1:13,6:19:99:272,0,155	0/1:13,0:15:64.23:64,0,123	0/1:19,5:24:99:235,0,249	0/1:6,5:11:54.53:204,0,55	0/1:20,0:22:28.27:28,0,248	0/1:10,4:14:99:266,0,106	0/0:16,0:16:25.33:0,25,539	0/1:12,4:16:99:232,0,102	0/1:19,4:23:99:264,0,121	0/0:17,0:17:22.12:0,22,292	0/1:16,3:18:99:225,0,132	0/1:14,8:22:99:445,0,121	0/1:7,2:9:43.79:100,0,44	0/1:16,0:16:20.12:20,0,163	0/1:16,7:23:99:305,0,149	0/1:12,0:12:35.80:36,0,159	0/0:32,0:32:70.68:0,71,699	0/0:26,0:26:77.40:0,77,548	0/0:35,0:33:38.62:0,39,312	0/1:12,0:12:15:15,0,195
chr10	19903494	.	GA	G	830.89	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.537;DP=558;FS=2.253;HRun=6;HaplotypeScore=58.4225;InbreedingCoeff=0.8271;MQ=77.56;MQ0=1;MQRankSum=2.756;QD=25.18;ReadPosRankSum=-5.111;VQSLOD=1.1748;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:48.14:0,48,608	0/0:12,0:12:36.10:0,36,451	0/0:22,0:17:26.79:0,27,352	0/0:13,0:13:1.88:0,2,129	0/0:29,0:29:81.21:0,81,1019	0/0:20,0:20:60.18:0,60,765	0/0:13,0:13:36.08:0,36,426	1/1:1,32:33:93.10:926,93,0	0/0:21,0:21:60.19:0,60,778	0/0:15,0:15:42.13:0,42,535	0/0:20,0:20:60.18:0,60,764	0/0:17,0:17:51.16:0,51,647	0/0:19,0:19:57.19:0,57,739	0/0:26,0:26:72.20:0,72,886	0/0:19,0:19:54.16:0,54,686	0/0:19,0:19:57.16:0,57,713	0/0:21,0:21:63.18:0,63,789	0/0:13,0:13:39.12:0,39,496	0/0:20,0:20:57.16:0,57,701	0/0:21,0:21:63.18:0,63,799	0/0:18,0:18:54.16:0,54,687	0/0:15,0:15:39.08:0,39,454	0/0:19,0:19:51.15:0,51,649	0/0:13,0:13:36.10:0,36,445	0/0:33,0:33:96.29:0,96,1214	0/0:27,0:27:75.22:0,75,947	0/0:26,0:26:75.22:0,75,943	0/0:17,0:17:51.17:0,51,662
chr10	19905274	.	A	AT	12744.62	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-12.503;DP=628;FS=0.000;HRun=1;HaplotypeScore=63.0707;InbreedingCoeff=0.9907;MQ=72.18;MQ0=0;MQRankSum=-4.771;QD=42.20;ReadPosRankSum=2.898;VQSLOD=5.2326;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:78.25:0,78,1011	0/0:10,0:10:30.08:0,30,374	0/0:21,0:20:53.59:0,54,646	0/0:23,0:22:59.90:0,60,734	0/0:29,0:29:84.27:0,84,1088	0/0:28,0:28:75.23:0,75,959	0/0:14,0:14:39.13:0,39,506	0/0:44,0:44:99:0,126,1583	0/0:14,0:14:36.09:0,36,438	1/1:0,24:24:69.22:1009,69,0	1/1:0,25:25:72.20:1054,72,0	1/1:0,27:27:81.27:1212,81,0	1/1:5,13:18:51.16:739,51,0	1/1:2,25:27:69.20:1009,69,0	0/0:17,0:17:48.15:0,48,610	1/1:0,25:25:72.24:1078,72,0	1/1:0,27:27:78.26:1168,78,0	1/1:0,17:18:54.18:797,54,0	1/1:0,12:12:36.12:539,36,0	1/1:2,30:32:93.30:1356,93,0	1/1:0,16:16:48.16:717,48,0	1/1:1,15:16:45.15:673,45,0	1/1:0,27:27:78.22:1144,78,0	1/1:3,5:8:18.04:249,18,0	0/0:31,0:31:90.27:0,90,1151	0/0:27,1:28:39.29:0,39,1007	0/0:37,0:36:99:0,108,1402	0/0:3,0:3:8.97:0,9,82
chr10	19905339	.	TAA	T	8818.52	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-2.050;DP=554;FS=6.494;HRun=13;HaplotypeScore=89.5088;InbreedingCoeff=0.9699;MQ=76.57;MQ0=1;MQRankSum=-2.857;QD=19.55;ReadPosRankSum=7.216;VQSLOD=3.9984;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,18:24:59.26:530,59,0	1/1:3,10:14:28.88:271,29,0	0/0:19,0:15:19.59:0,20,222	0/0:24,1:22:9.95:0,10,201	1/1:5,20:25:30.74:458,31,0	1/1:3,16:19:39.03:378,39,0	1/1:2,8:10:24:232,24,0	0/0:13,0:35:82:0,82,837	1/1:1,14:18:38.28:327,38,0	1/1:11,13:25:44.59:397,45,0	1/1:8,6:15:18.96:220,19,0	1/1:7,12:19:35.80:386,36,0	1/1:3,25:28:63.07:609,63,0	1/1:3,14:17:39.04:378,39,0	0/0:20,0:22:54.14:0,54,711	1/1:5,11:16:36:348,36,0	1/1:8,15:24:50.75:477,51,0	1/1:3,16:18:45.02:430,45,0	1/1:5,7:13:12.36:218,12,0	1/1:14,11:27:32.49:389,32,0	1/1:1,12:13:29.77:290,30,0	1/1:7,7:14:20.92:204,21,0	1/1:7,8:14:26.94:259,27,0	1/1:2,9:11:27.03:262,27,0	1/1:5,8:13:17.99:175,18,0	1/1:6,25:32:77.83:739,78,0	1/1:6,15:21:45.05:435,45,0	1/1:2,16:18:42.04:407,42,0
chr10	19909156	.	C	CA	1238.56	PASS	AB=0.779;AC=23;AF=0.426;AN=54;BaseQRankSum=-3.835;DP=414;FS=15.248;HRun=15;HaplotypeScore=68.2422;InbreedingCoeff=-0.0073;MQ=50.66;MQ0=15;MQRankSum=0.905;QD=5.06;ReadPosRankSum=-1.942;VQSLOD=0.3119;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:33:52.79:0,53,307	0/1:9,0:9:10.38:10,0,57	0/1:9,0:6:21.44:34,0,21	./.	0/1:13,5:20:47.97:90,0,48	0/0:6,0:16:20.30:0,20,59	0/0:4,0:13:14.12:0,14,41	0/0:10,0:26:29.04:0,29,83	0/0:10,0:10:14.50:0,15,86	0/1:17,10:26:33.32:185,0,33	0/1:11,4:18:46.17:53,0,46	1/1:3,2:5:5.99:50,6,0	0/1:4,6:10:9.31:42,0,9	1/1:5,6:11:11.98:100,12,0	0/1:16,2:19:38.82:39,0,114	0/1:3,4:6:9.10:32,0,9	0/1:7,7:13:18.04:79,0,18	1/1:10,10:19:1.84:123,2,0	1/1:7,6:14:8.77:158,9,0	0/1:17,5:22:10.99:179,0,11	0/1:4,4:7:9:41,0,9	0/1:3,7:10:3.18:75,0,3	1/1:4,5:10:12.30:91,12,0	0/1:7,1:7:9.34:28,0,9	0/0:13,0:18:14.43:0,14,143	0/0:11,0:10:10.69:0,11,70	0/0:18,1:20:4.32:0,4,117	0/0:13,0:12:28.48:0,28,167
chr10	19910524	.	GTGAA	G	1053.79	PASS	AB=0.941;AC=5;AF=0.089;AN=56;BaseQRankSum=6.807;DP=605;FS=5.085;HRun=0;HaplotypeScore=96.3820;InbreedingCoeff=0.7751;MQ=73.45;MQ0=3;MQRankSum=-0.595;QD=16.73;ReadPosRankSum=-0.132;VQSLOD=2.7510;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:48.10:0,48,1057	0/0:8,0:8:21.07:0,21,509	0/0:24,0:21:18.06:0,18,417	0/0:24,0:19:18.46:0,18,324	0/0:33,0:33:75.26:0,75,1805	1/1:4,19:22:42.14:681,42,0	1/1:12,12:24:30.10:486,30,0	0/0:22,0:22:39.12:0,39,639	0/0:28,0:28:72.25:0,72,1740	0/0:17,0:17:39.13:0,39,900	0/0:19,0:19:36.12:0,36,848	0/0:38,0:38:69.20:0,69,1522	0/0:23,0:23:51.18:0,51,1203	0/0:27,0:27:57.18:0,57,1324	0/0:26,0:26:69.24:0,69,1672	0/0:22,0:22:51.18:0,51,1230	0/1:15,1:16:15.57:16,0,637	0/0:20,0:20:42.13:0,42,970	0/0:21,0:21:33.10:0,33,740	0/0:26,0:26:66.23:0,66,1563	0/0:14,0:14:36.12:0,36,872	0/0:15,0:15:36.12:0,36,872	0/0:14,0:14:30.56:0,31,679	0/0:19,0:19:42.14:0,42,1004	0/0:17,0:17:39.13:0,39,922	0/0:25,0:25:60.21:0,60,1449	0/0:31,0:31:78.27:0,78,1872	0/0:6,0:6:18.06:0,18,436
chr10	19911492	.	GA	G	654.62	PASS	AB=0.900;AC=5;AF=0.089;AN=56;BaseQRankSum=2.775;DP=580;FS=2.158;HRun=9;HaplotypeScore=76.6924;InbreedingCoeff=0.7760;MQ=72.90;MQ0=0;MQRankSum=-0.760;QD=13.64;ReadPosRankSum=1.706;VQSLOD=3.8319;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:39.09:0,39,431	0/0:8,0:8:24.07:0,24,277	0/0:13,0:13:10.36:0,10,167	0/0:12,0:12:21.05:0,21,230	0/0:29,0:29:69.09:0,69,724	1/1:5,20:25:51.02:467,51,0	1/1:1,12:14:35.05:308,35,0	0/0:30,2:32:5.23:0,5,560	0/0:22,0:22:57.17:0,57,658	0/0:25,0:25:63.17:0,63,705	0/0:10,0:10:27.06:0,27,293	0/0:22,0:22:63.19:0,63,726	0/0:30,0:30:75.20:0,75,844	0/0:30,0:30:84.23:0,84,952	0/0:27,0:27:72.20:0,72,821	0/0:33,2:35:41.36:0,41,984	0/0:23,1:24:38.65:0,39,653	0/0:17,0:17:45.13:0,45,519	0/0:17,0:17:30.07:0,30,331	0/0:19,0:19:54.13:0,54,598	0/0:19,0:19:54.15:0,54,615	0/0:14,0:14:21.01:0,21,275	0/0:23,0:23:54.03:0,54,557	0/0:18,0:18:48.13:0,48,546	0/0:17,0:17:45.08:0,45,476	0/0:27,0:27:75.15:0,75,812	0/0:28,0:28:69.20:0,69,792	0/1:8,1:9:3.40:3,0,209
chr10	19911907	.	CATA	C	611.97	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.141;DP=390;FS=2.075;HRun=0;HaplotypeScore=55.8913;InbreedingCoeff=0.6857;MQ=71.53;MQ0=0;MQRankSum=-1.320;QD=27.82;ReadPosRankSum=1.220;VQSLOD=3.6254;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:54.17:0,54,1007	0/0:14,0:14:36.12:0,36,748	0/0:13,0:13:27.06:0,27,511	0/0:11,0:11:0.85:0,1,228	0/0:19,0:19:51.18:0,51,1072	1/1:2,16:18:42.14:632,42,0	1/1:0,4:4:6.02:90,6,0	0/0:38,0:38:96.33:0,96,1950	0/0:13,0:13:24.08:0,24,505	0/0:9,0:9:27.09:0,27,569	0/0:17,0:17:48.16:0,48,1010	0/0:18,0:18:45.15:0,45,877	0/0:9,0:9:21.07:0,21,405	0/0:12,0:12:30.10:0,30,610	0/0:17,0:17:45.15:0,45,947	0/0:4,0:4:9.03:0,9,176	0/0:19,0:19:45.09:0,45,892	0/0:12,0:12:33.11:0,33,638	0/0:23,0:22:60.21:0,60,1251	0/0:15,0:15:36.11:0,36,710	0/0:3,0:3:3.01:0,3,63	0/0:3,0:3:6:0,6,52	0/0:3,0:3:9.03:0,9,164	0/0:10,0:10:18.06:0,18,369	0/0:15,0:15:33.11:0,33,666	0/0:18,0:18:48.16:0,48,986	0/0:19,0:18:54.12:0,54,1026	0/0:14,0:14:33.11:0,33,691
chr10	19912081	.	TCC	T	35.76	PASS	AB=0.841;AC=3;AF=0.054;AN=56;BaseQRankSum=1.009;DP=384;FS=0.000;HRun=2;HaplotypeScore=140.4806;InbreedingCoeff=-0.0689;MQ=40.38;MQ0=16;MQRankSum=-1.303;QD=1.63;ReadPosRankSum=2.438;VQSLOD=-0.6190;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:8:21.06:0,21,253	0/0:7,0:6:12.04:0,12,194	0/0:18,0:5:14.63:0,15,150	0/0:16,0:3:5.42:0,5,48	0/0:20,0:20:40.75:0,41,370	0/1:6,6:11:99:99,0,121	0/1:5,1:6:24.22:24,0,76	0/0:33,0:26:68.16:0,68,727	0/0:8,0:7:8.97:0,9,94	0/0:9,0:7:21.03:0,21,266	0/0:17,0:16:30.65:0,31,273	0/0:13,0:13:28.36:0,28,301	0/0:13,0:13:34.04:0,34,384	0/0:11,0:10:30.04:0,30,353	0/0:16,0:14:42.13:0,42,719	0/0:4,0:3:7.79:0,8,61	0/0:21,0:21:46.55:0,47,526	0/1:4,0:4:1.86:2,0,44	0/0:27,0:24:72.05:0,72,909	0/0:12,0:11:18.36:0,18,182	0/0:6,0:6:14.64:0,15,157	0/0:4,0:4:4.37:0,4,40	0/0:11,0:11:11.11:0,11,116	0/0:16,0:16:34.46:0,34,264	0/0:13,0:13:34.45:0,34,509	0/0:22,0:19:52.67:0,53,683	0/0:15,0:15:14.86:0,15,187	0/0:19,0:19:36.10:0,36,414
chr10	19912086	.	C	CTCT	5088.92	PASS	AB=0.883;AC=35;AF=0.625;AN=56;BaseQRankSum=-2.937;DP=363;FS=7.290;HRun=0;HaplotypeScore=128.6755;InbreedingCoeff=-0.4034;MQ=37.88;MQ0=15;MQRankSum=0.202;QD=14.58;ReadPosRankSum=-2.188;VQSLOD=3.5272;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:10,0:8:18.80:90,0,19	0/1:6,0:5:43.88:44,0,58	0/0:14,0:2:2.39:0,2,11	0/1:13,0:3:0.89:1,0,13	0/1:16,0:16:8.32:106,0,8	0/1:12,0:11:34.07:34,0,56	0/1:6,0:6:0.76:1,0,40	0/1:31,0:24:34.46:320,0,34	0/1:7,0:6:12.68:50,0,13	1/1:3,6:7:15.05:318,15,0	1/1:6,10:16:12.35:437,12,0	0/1:5,8:13:16.02:369,0,16	0/1:10,3:13:80.80:258,0,81	0/1:7,3:9:3.23:333,0,3	0/1:16,0:14:53.36:53,0,385	1/1:3,1:3:8.98:124,9,0	1/1:16,4:20:47.08:793,47,0	0/1:2,1:3:16.54:57,0,17	0/1:25,2:23:62.66:291,0,63	0/1:7,4:11:46.29:116,0,46	1/1:5,1:6:13.86:104,14,0	0/1:1,2:4:36.65:104,0,37	0/1:4,4:11:27.74:173,0,28	1/1:12,3:15:27.83:314,28,0	0/1:13,0:13:35.94:36,0,124	0/1:21,0:18:99:160,0,177	1/1:15,0:15:0.84:78,1,0	1/1:19,0:19:10.93:324,11,0
chr10	19912105	.	TCAA	T	987.94	PASS	AB=0.979;AC=46;AF=0.852;AN=54;BaseQRankSum=-2.153;DP=212;FS=0.000;HRun=0;HaplotypeScore=113.3633;InbreedingCoeff=0.1443;MQ=37.51;MQ0=5;MQRankSum=-1.247;QD=5.15;ReadPosRankSum=-2.827;VQSLOD=1.3482;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:4:6.01:59,6,0	1/1:2,0:2:2.88:15,3,0	./.	0/0:5,0:2:2.74:0,3,12	1/1:11,1:12:5.62:27,6,0	1/1:9,1:10:15.12:135,15,0	1/1:3,0:3:2.84:14,3,0	1/1:20,0:14:2.60:10,3,0	1/1:3,0:2:4.56:36,5,0	1/1:4,0:3:4.04:13,4,0	1/1:12,0:12:8.65:47,9,0	1/1:10,0:10:7.30:25,7,0	0/1:10,0:10:1.39:25,0,1	1/1:8,0:8:9.80:79,10,0	0/1:10,1:11:40.47:90,0,40	1/1:2,1:3:3.90:50,4,0	1/1:16,1:17:6.38:107,6,0	0/1:3,0:3:1.78:2,0,16	1/1:9,0:8:8.86:28,9,0	0/0:6,0:6:0.56:0,1,1	0/1:5,0:5:6.22:6,0,7	1/1:2,1:3:4.69:19,5,0	1/1:6,0:6:5.38:22,5,0	1/1:8,1:9:9.30:64,9,0	1/1:4,0:4:2.84:14,3,0	1/1:5,0:4:0.47:1,0,0	1/1:9,0:9:3.36:18,3,0	1/1:8,2:10:13.63:192,14,0
chr10	19912925	.	TC	T	10075.68	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=10.771;DP=513;FS=3.861;HRun=1;HaplotypeScore=50.7795;InbreedingCoeff=0.9745;MQ=75.29;MQ0=0;MQRankSum=0.970;QD=38.02;ReadPosRankSum=6.644;VQSLOD=4.5866;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:60.18:0,60,913	0/0:6,0:6:18.06:0,18,281	0/0:7,0:7:18.06:0,18,286	0/0:13,0:13:30.10:0,30,462	0/0:13,0:13:24.08:0,24,384	0/0:21,0:21:63.21:0,63,1003	0/0:23,0:23:69.22:0,69,1080	0/0:25,0:25:75.24:0,75,1139	0/0:25,0:25:75.26:0,75,1199	1/1:0,15:15:42.59:568,43,0	1/1:1,4:5:15:177,15,0	1/1:0,19:19:57.19:797,57,0	1/1:0,19:19:51.05:713,51,0	1/1:0,26:26:66.22:923,66,0	0/0:18,0:18:51.17:0,51,815	1/1:0,36:36:99:1385,99,0	1/1:0,37:37:99:1385,99,0	1/1:0,21:21:51.17:713,51,0	1/1:0,20:20:60.20:835,60,0	1/1:0,5:5:15.05:210,15,0	1/1:0,24:24:66.22:923,66,0	1/1:0,4:4:9.03:126,9,0	1/1:0,3:3:8.99:104,9,0	1/1:0,31:31:87.29:1217,87,0	0/0:18,0:18:54.15:0,54,815	0/0:21,1:22:21.24:0,21,918	0/0:32,0:32:96.29:0,96,1461	0/0:5,0:5:15.05:0,15,240
chr10	19913091	.	G	GA	778.72	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-8.080;DP=523;FS=0.767;HRun=8;HaplotypeScore=46.8478;InbreedingCoeff=0.9692;MQ=64.48;MQ0=0;MQRankSum=1.882;QD=25.12;ReadPosRankSum=-0.178;VQSLOD=3.9879;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:39.02:0,39,357	0/0:10,0:10:30.02:0,30,274	0/0:7,0:7:15:0,15,133	0/0:6,0:6:11.09:0,11,108	0/0:31,0:31:84.04:0,84,768	1/1:2,15:17:45.13:519,45,0	1/1:2,12:14:33.10:381,33,0	0/0:37,0:37:99:0,99,903	0/0:17,0:17:42:0,42,379	0/0:31,0:31:84.03:0,84,769	0/0:22,0:22:60.03:0,60,549	0/0:15,0:15:36.01:0,36,329	0/0:16,0:16:42.02:0,42,384	0/0:14,0:14:36.01:0,36,329	0/0:13,0:13:36.02:0,36,330	0/0:21,0:21:57.03:0,57,522	0/0:22,0:22:57.02:0,57,521	0/0:32,0:32:90.05:0,90,823	0/0:17,0:17:42.01:0,42,381	0/0:19,0:19:54.03:0,54,494	0/0:11,0:11:21.01:0,21,192	0/0:9,0:9:24.01:0,24,219	0/0:19,0:19:57.03:0,57,522	0/0:13,0:13:36.02:0,36,329	0/0:27,0:27:81.04:0,81,741	0/0:25,0:25:63.03:0,63,577	0/0:27,0:27:71.99:0,72,651	0/0:15,0:15:45.02:0,45,412
chr10	19914638	.	TAA	T	4032.36	PASS	AB=0.600;AC=27;AF=0.482;AN=56;BaseQRankSum=-11.443;DP=500;FS=12.781;HRun=12;HaplotypeScore=81.1764;InbreedingCoeff=0.8752;MQ=67.35;MQ0=1;MQRankSum=0.651;QD=16.73;ReadPosRankSum=2.465;VQSLOD=1.2601;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:68.78:0,69,560	0/0:7,0:7:14.95:0,15,117	0/0:4,0:4:8.96:0,9,117	0/0:8,0:8:11.53:0,12,69	0/0:19,0:19:38.26:0,38,298	0/0:24,0:24:44.83:0,45,348	0/0:23,0:23:56.64:0,57,434	0/0:28,0:32:68.69:0,69,933	0/0:13,0:13:32.89:0,33,259	1/1:2,9:11:27.02:274,27,0	1/1:3,12:15:2.26:243,2,0	1/1:5,18:24:50.75:486,51,0	1/1:5,9:14:8.99:91,9,0	1/1:2,17:19:35.97:366,36,0	0/0:3,0:28:57.89:0,58,218	1/1:4,17:21:48.08:488,48,0	1/1:5,19:24:45.07:458,45,0	1/1:2,21:23:39.09:397,39,0	1/1:3,11:14:26.74:244,27,0	1/1:6,13:20:23.76:293,24,0	1/1:4,10:14:17.91:170,18,0	1/1:6,5:11:11.46:121,11,0	0/1:4,8:12:13.04:65,0,13	1/1:2,17:19:33.06:336,33,0	0/0:18,0:18:41.84:0,42,325	0/0:17,0:17:35.74:0,36,287	0/0:22,0:22:44.83:0,45,349	0/0:9,0:9:23.93:0,24,189
chr10	19914648	.	A	AT	5185.99	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-13.221;DP=504;FS=29.353;HRun=0;HaplotypeScore=76.7323;InbreedingCoeff=0.9788;MQ=71.45;MQ0=1;MQRankSum=-0.523;QD=27.15;ReadPosRankSum=1.472;VQSLOD=3.4105;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,28:38:16.84:744,17,0	1/1:4,4:8:20.98:226,21,0	0/0:9,0:9:19.93:0,20,172	0/0:10,0:9:17.12:0,17,200	1/1:4,14:18:7.04:435,7,0	1/1:3,19:22:45.10:593,45,0	1/1:1,23:24:57.10:729,57,0	0/0:29,0:29:77.92:0,78,913	1/1:1,14:15:33.09:432,33,0	0/0:15,0:15:35.11:0,35,226	0/0:16,0:16:36.43:0,36,228	0/0:22,0:22:58.35:0,58,351	0/0:12,0:12:17.71:0,18,128	0/0:17,0:17:34.83:0,35,190	0/0:26,0:26:68.03:0,68,439	0/0:18,0:18:46.44:0,46,253	0/0:21,0:21:46.54:0,47,263	0/0:21,0:21:37.73:0,38,205	0/0:19,0:19:43.10:0,43,284	0/0:20,0:20:43.52:0,44,263	0/0:15,0:15:26.32:0,26,158	0/0:13,0:13:20.58:0,21,138	0/0:12,0:12:18.20:0,18,123	0/0:18,0:18:34.93:0,35,201	1/1:2,15:18:42.09:557,42,0	1/1:2,18:21:31.19:562,31,0	1/1:1,16:17:45.15:595,45,0	1/1:2,8:10:24.05:314,24,0
chr10	19916810	.	G	GAA	1160.45	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=-0.865;DP=592;FS=7.876;HRun=9;HaplotypeScore=79.1593;InbreedingCoeff=0.7412;MQ=79.66;MQ0=0;MQRankSum=-0.511;QD=24.69;ReadPosRankSum=-1.660;VQSLOD=2.6213;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:45.09:0,45,479	0/0:6,0:6:12.02:0,12,128	0/0:19,0:18:6.72:0,7,183	0/1:12,0:10:13.77:14,0,36	0/0:29,0:29:77.23:0,77,829	1/1:3,18:21:51.17:785,51,0	1/1:1,9:14:38.09:490,38,0	0/0:35,0:36:78.09:0,78,866	0/0:27,0:27:37.86:0,38,606	0/0:23,0:23:62.96:0,63,646	0/0:22,0:22:57.05:0,57,591	0/0:27,0:27:72.16:0,72,765	0/0:37,0:37:99:0,99,1054	0/0:10,0:10:30.06:0,30,311	0/0:16,0:16:42.10:0,42,447	0/0:23,0:23:57.08:0,57,590	0/0:18,0:18:51.13:0,51,543	0/0:12,0:12:15.32:0,15,330	0/0:22,0:22:54.09:0,54,564	0/0:20,0:21:50.84:0,51,523	0/0:19,0:19:51.11:0,51,543	0/0:19,0:19:45.10:0,45,479	0/0:24,0:24:66.14:0,66,694	0/0:10,0:10:27.07:0,27,287	0/0:36,0:35:96.21:0,96,1012	0/0:27,0:27:66.14:0,66,702	0/0:27,0:27:78.19:0,78,830	0/0:14,0:15:44.85:0,45,459
chr10	19917001	.	G	GT	12004.79	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-6.335;DP=571;FS=2.073;HRun=9;HaplotypeScore=65.6410;InbreedingCoeff=0.9339;MQ=75.26;MQ0=0;MQRankSum=-3.185;QD=23.04;ReadPosRankSum=2.600;VQSLOD=5.8664;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,18:23:49.49:533,49,0	1/1:2,8:11:17.88:180,18,0	0/0:13,0:13:25.29:0,25,207	0/0:9,0:9:12.86:0,13,101	1/1:5,16:21:45.04:471,45,0	1/1:6,1:21:43.27:234,43,0	1/1:4,0:8:14.36:78,14,0	1/1:7,30:38:90.47:936,90,0	1/1:1,0:18:42.61:213,43,0	1/1:5,27:32:78.20:853,78,0	1/1:3,23:26:65.95:688,66,0	1/1:6,12:18:7.03:306,7,0	1/1:4,24:28:57.10:608,57,0	1/1:2,10:12:27.07:299,27,0	0/0:28,0:28:74.95:0,75,647	1/1:2,16:18:42.11:465,42,0	1/1:3,19:23:50.97:545,51,0	1/1:0,20:20:60.13:651,60,0	1/1:6,11:18:38.94:411,39,0	1/1:5,26:31:78.02:833,78,0	1/1:1,15:20:50.47:488,50,0	1/1:5,12:17:36.10:398,36,0	1/1:7,16:23:35.34:592,35,0	1/1:1,11:12:27.07:299,27,0	1/1:6,11:18:9.85:306,10,0	1/1:6,17:23:51.14:564,51,0	1/1:4,23:26:63.03:690,63,0	1/1:2,12:14:33.09:365,33,0
chr10	19918123	.	T	TATATATAC	1646.73	PASS	AB=1.000;AC=7;AF=0.135;AN=52;BaseQRankSum=-5.721;DP=305;FS=17.462;HRun=0;HaplotypeScore=118.8628;InbreedingCoeff=0.0940;MQ=46.77;MQ0=5;MQRankSum=-1.350;QD=19.37;ReadPosRankSum=-4.170;VQSLOD=-0.0270;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:14,0:16:40.55:41,0,77	0/1:6,0:6:13.89:14,0,18	./.	./.	0/0:13,0:14:7.94:0,8,62	0/0:3,0:2:6:0,6,97	0/0:1,0:1:3.01:0,3,49	1/1:2,13:29:80.54:1660,81,0	0/0:4,0:17:19.53:0,20,239	0/0:8,0:7:17.45:0,17,104	0/0:11,0:11:3.01:0,3,88	0/0:5,0:5:2.84:0,3,23	0/0:6,0:6:18.05:0,18,450	0/0:7,0:7:6.02:0,6,175	0/0:6,0:6:15.02:0,15,289	0/0:8,0:8:8.95:0,9,130	0/0:26,0:25:39.54:0,40,812	0/0:25,0:22:60.04:0,60,1421	0/0:17,0:16:39.78:0,40,897	0/0:12,0:12:18.06:0,18,465	0/0:7,0:7:3:0,3,29	0/0:7,0:6:6.02:0,6,175	0/0:6,0:5:3.01:0,3,51	0/0:5,0:5:2.04:0,2,6	0/0:16,0:16:3:0,3,50	0/1:10,0:9:6.82:46,0,7	0/1:13,0:13:2.70:3,0,39	0/1:11,0:10:0.64:1,0,184
chr10	19918126	.	A	ATG	420.78	PASS	AB=0.933;AC=9;AF=0.173;AN=52;BaseQRankSum=0.220;DP=310;FS=2.106;HRun=0;HaplotypeScore=96.6572;InbreedingCoeff=-0.0445;MQ=47.53;MQ0=7;MQRankSum=0.758;QD=4.25;ReadPosRankSum=1.036;VQSLOD=2.1689;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:17,0:17:56.11:105,0,56	1/1:4,3:6:1.14:42,1,0	./.	./.	0/1:13,2:15:33.39:71,0,33	0/0:4,0:3:6.02:0,6,82	0/0:1,0:1:3.01:0,3,43	0/0:17,0:17:31.61:0,32,169	0/1:18,0:18:17.90:161,0,18	0/0:9,0:8:20.95:0,21,229	0/0:12,0:12:3.95:0,4,46	0/0:4,0:4:3.01:0,3,39	0/0:6,0:6:18.06:0,18,261	0/0:8,0:8:5.85:0,6,88	0/0:6,0:6:15.05:0,15,218	0/0:8,0:8:9.02:0,9,107	0/0:26,0:25:35.96:0,36,429	0/0:26,0:23:66.17:0,66,871	0/0:20,0:18:51.14:0,51,678	0/0:14,0:14:18.05:0,18,233	0/0:7,0:7:3.01:0,3,37	0/0:8,0:7:6.02:0,6,87	0/0:7,0:6:2.64:0,3,39	0/1:7,0:7:0:0,0,0	0/0:14,0:15:3:0,3,26	0/1:10,0:9:32.89:118,0,33	0/1:6,6:13:13.21:40,0,13	0/1:12,0:10:1.07:1,0,76
chr10	19918127	.	T	TAC	288.18	PASS	AB=0.986;AC=12;AF=0.231;AN=52;BaseQRankSum=-0.479;DP=310;FS=1.055;HRun=0;HaplotypeScore=100.6379;InbreedingCoeff=0.1872;MQ=45.75;MQ0=7;MQRankSum=0.350;QD=3.47;ReadPosRankSum=-0.426;VQSLOD=2.0624;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:16,1:17:38.24:45,0,38	1/1:7,0:6:2.72:74,3,0	./.	./.	0/0:14,1:15:6.45:0,6,43	0/1:4,0:3:3.14:3,0,24	0/0:1,0:1:3:0,3,29	0/0:17,0:17:12.72:0,13,161	0/0:18,0:18:15.08:0,15,94	0/0:9,0:8:20.87:0,21,170	0/0:13,0:13:3.48:0,3,45	0/0:4,0:4:2.99:0,3,24	0/0:6,0:6:18.04:0,18,246	0/0:9,0:9:5.85:0,6,88	0/0:6,0:6:15.05:0,15,227	0/0:8,0:8:8.98:0,9,90	0/0:26,0:25:32.09:0,32,394	0/0:26,0:23:62.97:0,63,751	0/0:20,0:18:50.97:0,51,579	0/0:14,0:14:18.05:0,18,229	0/0:7,0:7:3.01:0,3,37	0/0:9,0:8:5.78:0,6,88	0/0:7,0:6:2.64:0,3,35	1/1:7,0:7:0.42:1,0,0	1/1:7,8:15:0.42:2,0,0	0/1:10,0:9:8.29:57,0,8	0/1:12,0:12:34.64:82,0,35	1/1:11,0:9:3:143,3,0
chr10	19918128	.	ATGTGTG	A	1348.23	PASS	AB=0.603;AC=20;AF=0.417;AN=48;BaseQRankSum=-2.328;DP=309;FS=1.994;HRun=0;HaplotypeScore=106.7030;InbreedingCoeff=0.6356;MQ=45.61;MQ0=6;MQRankSum=-2.068;QD=9.49;ReadPosRankSum=0.245;VQSLOD=2.5552;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:14.86:0,15,394	0/0:7,0:6:2.77:0,3,78	./.	./.	0/0:14,0:14:13.86:0,14,350	0/0:1,0:3:5.98:0,6,46	0/0:1,0:2:2.98:0,3,22	0/0:21,0:21:33.03:0,33,695	0/0:18,0:18:21.07:0,21,543	1/1:4,4:8:15.04:253,15,0	1/1:3,10:13:3.48:54,3,0	1/1:3,1:4:2.60:62,3,0	1/1:5,1:6:3.01:62,3,0	0/1:2,7:9:0:0,0,0	0/0:6,0:6:9.03:0,9,294	1/1:2,6:8:3.01:62,3,0	1/1:15,10:24:8.09:182,8,0	1/1:21,4:23:21.07:394,21,0	1/1:12,7:17:17.84:309,18,0	1/1:6,8:14:6.02:124,6,0	./.	0/1:4,4:8:0:0,0,0	./.	0/0:2,5:7:0:0,0,0	0/0:15,0:15:0.47:0,0,1	0/0:3,0:9:12.93:0,13,334	0/0:12,0:12:9.32:0,9,267	0/0:11,0:9:15.05:0,15,314
chr10	19919824	.	A	AT	19140.51	PASS	AB=0.556;AC=49;AF=0.875;AN=56;BaseQRankSum=-7.113;DP=687;FS=0.000;HRun=7;HaplotypeScore=59.3156;InbreedingCoeff=0.8827;MQ=67.90;MQ0=0;MQRankSum=-5.380;QD=30.00;ReadPosRankSum=3.223;VQSLOD=5.0604;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,30:33:90.24:1072,90,0	0/1:2,8:10:1.90:260,0,2	0/0:19,0:19:33.33:0,33,337	0/0:7,0:7:13.40:0,13,86	1/1:5,31:36:90.28:1084,90,0	1/1:1,19:20:45.61:544,46,0	1/1:6,24:30:63.19:758,63,0	1/1:5,41:46:99:1389,117,0	1/1:1,19:20:48.15:580,48,0	1/1:3,25:28:75.19:871,75,0	1/1:5,20:25:60.18:723,60,0	1/1:2,17:19:48.14:573,48,0	1/1:0,22:22:63.19:761,63,0	1/1:2,25:27:66.20:797,66,0	0/0:23,0:23:60.09:0,60,579	1/1:2,22:24:63.19:760,63,0	1/1:3,41:44:99:1268,105,0	1/1:6,26:32:72.22:870,72,0	1/1:1,15:16:48.15:580,48,0	1/1:2,29:31:84.19:996,84,0	1/1:1,14:15:39.12:471,39,0	1/1:3,22:25:63.19:753,63,0	1/1:3,21:24:57.17:686,57,0	1/1:0,13:14:41.99:486,42,0	1/1:4,25:29:75.23:905,75,0	1/1:3,30:33:90.28:1087,90,0	1/1:7,21:29:57.17:686,57,0	1/1:0,6:6:15.05:181,15,0
chr10	19920729	.	G	GA	9927.06	PASS	AB=1.000;AC=35;AF=0.625;AN=56;BaseQRankSum=-14.745;DP=637;FS=4.080;HRun=9;HaplotypeScore=58.1645;InbreedingCoeff=0.9323;MQ=80.07;MQ0=0;MQRankSum=-0.798;QD=26.54;ReadPosRankSum=2.125;VQSLOD=5.4456;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:86.95:0,87,750	0/0:16,0:16:41.95:0,42,357	0/0:17,0:17:25.24:0,25,235	0/1:15,0:15:8.19:8,0,137	0/0:42,1:43:77.78:0,78,900	1/1:4,10:14:30.08:332,30,0	1/1:1,16:17:19.07:439,19,0	0/0:31,1:32:56.19:0,56,689	1/1:0,17:17:48.13:531,48,0	1/1:1,25:26:72.19:795,72,0	1/1:2,20:22:60.16:664,60,0	1/1:3,26:29:49.15:770,49,0	1/1:3,18:21:51.14:564,51,0	1/1:0,16:16:45.12:498,45,0	0/0:28,1:29:76.03:0,76,715	1/1:2,32:34:87.24:962,87,0	1/1:3,27:30:81.22:896,81,0	1/1:3,18:21:51.14:564,51,0	1/1:5,9:14:27.05:288,27,0	1/1:6,20:26:31.07:558,31,0	1/1:0,9:9:27.07:299,27,0	1/1:1,20:21:54.15:597,54,0	1/1:2,17:19:41.82:464,42,0	1/1:2,21:23:63.17:697,63,0	0/0:25,0:25:68.93:0,69,587	0/0:28,1:29:44.77:0,45,610	0/0:28,0:27:83.93:0,84,717	0/0:13,0:13:29.94:0,30,251
chr10	19921374	.	C	CCAAGATCCA	19625.61	PASS	AB=0.623;AC=17;AF=0.304;AN=56;BaseQRankSum=-8.954;DP=741;FS=3.481;HRun=0;HaplotypeScore=186.9377;InbreedingCoeff=0.9102;MQ=81.50;MQ0=0;MQRankSum=-15.894;QD=81.10;ReadPosRankSum=-1.922;VQSLOD=4.7424;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:15,22:39:72.25:3228,72,0	1/1:5,10:17:33.11:1542,33,0	0/0:29,0:29:63.20:0,63,1656	0/0:19,0:19:45.15:0,45,1125	1/1:12,18:33:54.14:2305,54,0	1/1:5,14:20:30.10:1405,30,0	1/1:17,14:32:48.16:2142,48,0	0/0:21,0:21:51.16:0,51,1236	0/0:26,0:26:72.25:0,72,1982	0/0:38,0:38:99:0,105,2817	0/0:19,0:19:51.18:0,51,1454	0/0:32,0:32:84.29:0,84,2378	0/0:43,0:43:99:0,114,3141	0/0:29,0:29:75.26:0,75,2094	0/0:29,0:29:81.26:0,81,2177	0/0:24,0:24:63.22:0,63,1799	0/0:24,0:24:57.20:0,57,1629	0/0:29,0:29:69.24:0,69,1922	0/0:19,0:19:48.16:0,48,1328	0/0:14,0:14:36.12:0,36,1038	0/0:26,0:26:57.20:0,57,1644	0/0:26,0:26:63.22:0,63,1817	0/0:27,0:27:72.25:0,72,2084	0/0:25,0:25:63.19:0,63,1704	1/1:11,23:35:81.28:3748,81,0	0/1:13,19:33:96.03:2889,0,96	1/1:11,13:27:51.17:2203,51,0	1/1:6,0:6:12.01:164,12,0
chr10	19921501	.	GCACACA	G	7638.32	PASS	AB=0.688;AC=31;AF=0.596;AN=52;BaseQRankSum=5.146;DP=733;FS=3.577;HRun=0;HaplotypeScore=176.4302;InbreedingCoeff=0.8476;MQ=62.77;MQ0=14;MQRankSum=-10.485;QD=17.68;ReadPosRankSum=1.510;VQSLOD=4.6710;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:35:46.47:0,46,697	0/0:9,0:12:21.05:0,21,321	./.	./.	0/1:12,0:22:9.60:10,0,456	0/0:8,0:17:18.06:0,18,460	0/0:22,0:28:39.13:0,39,1126	0/0:29,0:30:14.95:0,15,185	1/1:9,0:29:57.19:794,57,0	1/1:19,13:33:42.13:739,42,0	1/1:7,5:13:14.89:175,15,0	1/1:22,15:41:42.14:740,42,0	1/1:8,22:32:54.14:1027,54,0	1/1:13,13:28:33.07:582,33,0	0/0:31,0:31:66.18:0,66,1862	1/1:16,19:40:60.12:1029,60,0	1/1:12,12:26:24.08:453,24,0	1/1:5,6:11:6.02:123,6,0	1/1:14,5:19:15.05:284,15,0	1/1:9,8:20:27.09:491,27,0	1/1:31,12:42:8.38:146,8,0	1/1:15,5:26:39.09:639,39,0	1/1:17,2:20:15.89:250,16,0	1/1:14,12:26:3.31:155,3,0	0/0:10,1:20:26.24:0,26,316	0/0:17,0:27:28.46:0,28,372	0/0:9,0:22:34.11:0,34,516	0/0:3,0:6:5.37:0,5,121
chr10	19922453	.	TA	T	6216.94	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=5.082;DP=471;FS=13.823;HRun=8;HaplotypeScore=48.8947;InbreedingCoeff=0.9793;MQ=61.19;MQ0=7;MQRankSum=-0.875;QD=23.28;ReadPosRankSum=1.274;VQSLOD=4.2323;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:39.12:0,39,471	0/0:13,0:13:33.06:0,33,382	0/0:9,0:7:21.06:0,21,236	0/0:2,0:2:6.02:0,6,68	0/0:23,0:22:66.20:0,66,797	0/0:19,0:19:45.12:0,45,544	0/0:9,0:7:18.06:0,18,217	1/1:3,32:33:93.13:893,93,0	0/0:18,0:18:39.12:0,39,469	1/1:3,25:27:75.12:724,75,0	1/1:0,12:12:33.05:319,33,0	1/1:1,17:17:36.05:348,36,0	1/1:2,21:23:57.09:550,57,0	1/1:1,17:17:42.07:406,42,0	0/0:19,0:17:45.12:0,45,528	1/1:1,15:16:36.06:348,36,0	1/1:5,20:24:57.09:550,57,0	1/1:6,10:14:36:332,36,0	1/1:1,13:14:39.06:377,39,0	1/1:0,18:18:53.99:501,54,0	1/1:3,8:11:18.03:174,18,0	1/1:0,6:6:18.03:174,18,0	1/1:4,14:17:39.06:376,39,0	1/1:1,8:8:15.02:145,15,0	0/0:17,0:17:48.15:0,48,580	0/0:23,0:23:69.15:0,69,798	0/0:16,0:16:36.11:0,36,435	0/0:19,0:19:54.12:0,54,636
chr10	19922908	.	AAT	A	3069.70	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=10.639;DP=485;FS=22.279;HRun=0;HaplotypeScore=104.2039;InbreedingCoeff=0.9421;MQ=60.49;MQ0=2;MQRankSum=3.014;QD=19.80;ReadPosRankSum=1.433;VQSLOD=2.2722;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:19:36.42:363,36,0	1/1:8,1:9:25.83:217,26,0	1/1:2,0:2:2.74:12,3,0	0/0:3,0:2:3.01:0,3,51	1/1:37,2:39:79.08:760,79,0	1/1:10,0:10:16.30:244,16,0	1/1:21,1:22:59.50:543,59,0	0/0:35,0:35:99:0,101,1528	0/0:22,0:22:66.20:0,66,1199	0/0:25,0:25:75.25:0,75,1285	0/0:24,0:24:68.82:0,69,1059	0/0:10,0:10:26.88:0,27,423	0/0:13,0:13:39.11:0,39,650	0/0:23,0:23:69.24:0,69,1239	0/0:22,0:22:66.23:0,66,1243	0/0:19,0:19:57.08:0,57,914	0/0:22,0:22:66.03:0,66,1019	0/0:25,0:25:72.22:0,72,1234	0/0:19,0:19:57.19:0,57,980	0/0:25,0:25:75.05:0,75,1198	0/0:12,0:10:30.05:0,30,488	0/0:6,0:6:18.05:0,18,295	0/0:19,0:19:57.05:0,57,912	0/0:6,0:6:18.06:0,18,304	1/1:17,0:17:48.52:385,49,0	1/1:15,0:15:40.21:332,40,0	1/1:16,0:16:28.69:267,29,0	1/1:6,0:6:17.95:161,18,0
chr10	19927513	.	AATAG	A	12841.64	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=8.472;DP=705;FS=2.626;HRun=0;HaplotypeScore=139.3405;InbreedingCoeff=0.9863;MQ=59.13;MQ0=1;MQRankSum=-2.463;QD=31.87;ReadPosRankSum=1.091;VQSLOD=4.7517;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:60.21:0,60,1467	0/0:11,0:11:9.03:0,9,225	0/0:28,0:20:33.09:0,33,648	0/0:21,0:17:27.56:0,28,537	0/0:38,0:38:60.21:0,60,1456	0/0:30,0:30:30.08:0,30,671	0/0:19,0:19:36.11:0,36,824	1/1:11,30:41:84.19:1239,84,0	1/1:3,22:25:48.16:813,48,0	1/1:7,26:33:75.26:1262,75,0	1/1:8,11:19:33.09:532,33,0	1/1:8,26:34:57.19:967,57,0	1/1:8,15:23:45.12:711,45,0	1/1:7,25:32:69.22:1145,69,0	0/0:31,0:31:78.21:0,78,1747	1/1:5,24:29:60.21:1018,60,0	1/1:8,16:24:33.11:559,33,0	1/1:3,9:12:21.07:356,21,0	1/1:9,14:22:25.12:639,25,0	1/1:5,20:25:51.17:854,51,0	1/1:1,19:20:42.14:713,42,0	1/1:4,22:26:45.15:764,45,0	1/1:3,17:20:45.15:764,45,0	1/1:7,10:17:33.08:507,33,0	0/0:44,0:44:57.11:0,57,1135	0/0:22,0:22:54.12:0,54,1266	0/0:22,0:22:15.05:0,15,375	0/0:6,0:6:15.05:0,15,375
chr10	19927558	.	AGATAGATAGAT	A	2925.93	PASS	AB=0.903;AC=15;AF=0.278;AN=54;BaseQRankSum=-7.265;DP=688;FS=11.527;HRun=0;HaplotypeScore=259.5206;InbreedingCoeff=0.5849;MQ=56.92;MQ0=5;MQRankSum=1.403;QD=12.56;ReadPosRankSum=2.011;VQSLOD=1.0571;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:25:99:231,0,297	1/1:14,0:14:3.01:70,3,0	0/1:14,0:4:0:0,0,0	0/1:10,0:4:0:0,0,0	0/0:11,23:34:3:0,3,28	1/1:7,25:32:3.01:59,3,0	./.	0/0:30,0:30:55.26:0,55,536	0/0:34,0:34:72.16:0,72,2061	0/0:31,0:31:80.29:0,80,1296	0/0:20,0:20:27.55:0,28,436	0/0:25,0:25:57.18:0,57,1194	0/1:29,0:28:99:179,0,471	0/0:39,0:39:93.27:0,93,1546	0/0:28,0:28:63.21:0,63,1066	0/0:27,0:27:60.20:0,60,991	0/0:18,0:18:33.11:0,33,543	0/0:13,0:13:33.11:0,33,678	0/0:16,0:15:37.36:0,37,530	0/0:30,0:30:57.60:0,58,882	0/0:20,0:20:39.13:0,39,675	0/0:24,0:24:48.16:0,48,713	0/0:25,0:24:51.13:0,51,740	0/0:19,0:19:39.10:0,39,613	0/1:2,35:37:0:0,0,0	1/1:3,28:31:25.92:1709,26,0	1/1:2,27:29:2.74:101,3,0	1/1:11,0:11:33.11:728,33,0
chr10	19927562	.	AGATAGAT	A	1478.05	PASS	AB=1.000;AC=9;AF=0.180;AN=50;BaseQRankSum=0.285;DP=680;FS=13.155;HRun=0;HaplotypeScore=223.7406;InbreedingCoeff=0.5005;MQ=57.09;MQ0=4;MQRankSum=1.872;QD=10.12;ReadPosRankSum=2.003;VQSLOD=0.8264;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:26:99:201,0,791	1/1:1,13:14:2.99:24,3,0	./.	./.	0/0:30,0:30:3.01:0,3,80	0/0:31,0:31:2.40:0,2,10	./.	0/0:30,0:30:69.18:0,69,824	0/0:31,0:31:72.16:0,72,1932	0/0:31,0:31:86.93:0,87,1002	0/0:22,0:22:21.38:0,21,291	0/0:27,0:27:63.20:0,63,1304	0/0:29,0:28:57.27:0,57,711	0/0:41,0:41:90.10:0,90,980	0/0:30,0:30:60.24:0,60,755	0/0:26,0:26:60.01:0,60,697	0/0:17,0:17:32.98:0,33,360	0/0:15,0:15:39.13:0,39,944	0/0:15,0:14:39.01:0,39,461	0/0:31,0:31:54.12:0,54,629	0/0:21,0:21:39.12:0,39,456	0/0:25,0:25:45.24:0,45,586	0/0:23,0:22:50.89:0,51,563	0/0:19,0:19:38.91:0,39,368	0/1:36,0:36:0:0,0,0	0/1:31,0:31:31.24:996,0,31	1/1:27,0:27:2.68:55,3,0	1/1:11,0:11:31.37:331,31,0
chr10	19927569	.	TGATA	T	4584.85	PASS	AB=1.000;AC=28;AF=0.583;AN=48;BaseQRankSum=1.975;DP=642;FS=1.221;HRun=0;HaplotypeScore=182.9383;InbreedingCoeff=0.7603;MQ=57.44;MQ0=7;MQRankSum=-1.374;QD=11.94;ReadPosRankSum=1.963;VQSLOD=3.9818;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:25:38.81:0,39,913	0/0:14,0:14:0.47:0,0,1	./.	./.	0/0:25,0:25:2.72:0,3,70	0/0:27,0:27:6.02:0,6,93	./.	./.	0/0:31,0:31:42.14:0,42,984	1/1:21,9:30:33.11:509,33,0	1/1:12,11:23:17.93:278,18,0	0/0:25,0:25:24.08:0,24,544	0/0:17,0:30:33.11:0,33,571	1/1:21,17:38:42.14:648,42,0	1/1:17,13:30:24.08:370,24,0	1/1:18,6:24:21.07:324,21,0	1/1:8,6:15:14.94:231,15,0	0/0:15,0:15:21.07:0,21,492	1/1:11,4:13:12.04:185,12,0	1/1:23,8:31:33.11:509,33,0	1/1:15,6:21:27.09:417,27,0	1/1:20,7:28:20.93:324,21,0	1/1:15,6:20:18.06:278,18,0	1/1:6,9:15:21.07:324,21,0	0/1:35,0:35:0.01:0,0,0	0/1:31,0:31:95.02:161,0,95	1/1:27,0:27:2.79:26,3,0	0/0:3,0:11:15.46:0,15,150
chr10	19928399	.	TAA	T	2969.94	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-10.611;DP=534;FS=3.682;HRun=12;HaplotypeScore=111.7833;InbreedingCoeff=0.9755;MQ=68.93;MQ0=3;MQRankSum=5.984;QD=16.87;ReadPosRankSum=6.826;VQSLOD=2.4740;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,27:31:39.13:475,39,0	1/1:2,8:10:10.87:107,11,0	0/0:23,0:17:8.20:0,8,215	0/0:18,0:10:13.56:0,14,138	1/1:7,19:27:25.33:430,25,0	1/1:4,14:19:35.78:347,36,0	1/1:2,16:18:36.08:366,36,0	0/0:8,0:12:16.61:0,17,59	0/0:14,0:16:38.94:0,39,182	0/0:14,0:21:48.06:0,48,484	0/0:20,0:25:52.49:0,52,610	0/0:8,0:17:45.06:0,45,451	0/0:16,0:20:47.06:0,47,433	0/0:15,0:19:42.09:0,42,461	0/0:21,0:22:59.69:0,60,851	0/0:5,0:16:42.06:0,42,426	0/0:16,0:22:44.78:0,45,449	0/0:7,0:14:32.99:0,33,302	0/0:11,0:15:33.03:0,33,354	0/0:19,0:27:70.33:0,70,711	0/0:7,0:9:21.47:0,21,219	0/0:19,0:29:69.04:0,69,691	0/0:7,0:13:39.04:0,39,376	0/0:8,0:14:21.67:0,22,246	1/1:2,19:21:39.05:397,39,0	1/1:4,20:25:22.34:512,22,0	1/1:1,14:15:29.80:305,30,0	1/1:2,8:10:24.04:244,24,0
chr10	19928414	.	A	AG	2017.21	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=11.630;DP=543;FS=3.617;HRun=8;HaplotypeScore=125.8113;InbreedingCoeff=0.9782;MQ=66.27;MQ0=3;MQRankSum=-11.418;QD=6.96;ReadPosRankSum=-2.350;VQSLOD=0.7950;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:56.94:0,57,511	0/0:9,0:9:18:0,18,163	0/0:23,0:15:30.21:0,30,235	0/0:22,0:14:13.62:0,14,117	0/0:27,0:27:51:0,51,463	0/0:18,0:18:50.93:0,51,449	0/0:17,0:17:39.01:0,39,356	1/1:12,10:21:21:212,21,0	1/1:11,3:15:30.06:327,30,0	1/1:17,0:18:30.30:136,30,0	1/1:20,0:21:30.11:131,30,0	1/1:17,0:19:24.28:117,24,0	1/1:17,0:18:33.08:150,33,0	1/1:15,0:16:33.15:150,33,0	0/0:23,0:23:36.47:0,36,474	1/1:16,0:17:33.03:149,33,0	1/1:22,0:22:32.35:148,32,0	1/1:12,0:13:22.36:110,22,0	1/1:16,0:16:27.38:122,27,0	1/1:22,0:23:23.22:101,23,0	1/1:12,0:13:10.91:48,11,0	1/1:28,0:28:46.74:210,47,0	1/1:10,0:10:8.23:37,8,0	1/1:16,0:16:22.01:99,22,0	0/0:20,0:20:42.02:0,42,384	0/0:27,0:27:35.48:0,35,311	0/0:24,0:24:54:0,54,489	0/0:11,0:11:33.02:0,33,302
chr10	19928418	.	G	GGGA	9392.15	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=-1.812;DP=564;FS=11.219;HRun=0;HaplotypeScore=128.0421;InbreedingCoeff=0.9235;MQ=64.34;MQ0=3;MQRankSum=-12.787;QD=33.07;ReadPosRankSum=1.540;VQSLOD=4.7808;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:72.17:0,72,1061	0/0:11,0:11:24.05:0,24,326	0/0:22,0:14:35.47:0,35,495	0/1:22,0:13:9.99:10,0,305	0/0:29,0:29:62.97:0,63,934	0/0:23,0:23:60.13:0,60,912	0/0:19,0:19:44.98:0,45,680	0/0:26,0:25:37.64:0,38,231	0/0:13,0:13:23.57:0,24,123	1/1:6,12:19:37.87:795,38,0	1/1:8,13:22:35.92:715,36,0	1/1:9,11:21:27.35:589,27,0	1/1:4,14:18:36.11:766,36,0	1/1:4,14:18:39.13:808,39,0	0/0:23,0:23:67.99:0,68,1002	1/1:3,12:15:39.13:807,39,0	1/1:4,14:18:39.11:799,39,0	1/1:5,9:15:26.82:544,27,0	1/1:5,14:19:43.43:827,43,0	1/1:10,14:25:34.50:623,35,0	1/1:6,10:16:14.97:272,15,0	1/1:10,18:29:54.17:1124,54,0	1/1:2,6:8:9.03:195,9,0	1/1:3,12:16:23.82:518,24,0	0/0:20,0:20:42.14:0,42,696	0/0:27,0:27:51.05:0,51,690	0/0:25,0:25:66.14:0,66,982	0/0:11,0:11:33.11:0,33,547
chr10	19932649	.	TG	T	7109.08	PASS	AB=0.978;AC=28;AF=0.500;AN=56;BaseQRankSum=-15.021;DP=664;FS=11.202;HRun=5;HaplotypeScore=118.8663;InbreedingCoeff=0.4020;MQ=89.32;MQ0=1;MQRankSum=-5.102;QD=17.05;ReadPosRankSum=-0.422;VQSLOD=3.4083;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,42:42:99:1312,117,0	1/1:0,11:11:27.03:292,27,0	0/0:42,0:32:58.60:0,59,847	0/0:42,0:34:55.53:0,56,608	1/1:0,31:31:81.05:871,81,0	1/1:1,25:26:66.19:748,66,0	1/1:1,13:14:27.08:306,27,0	1/1:1,34:35:99:1116,102,0	0/0:16,0:16:8.53:0,9,97	0/1:27,0:27:18.44:18,0,118	0/1:26,0:26:20.30:20,0,104	0/1:25,1:26:24.09:24,0,112	0/1:17,0:17:8.74:9,0,99	0/0:16,0:16:35.42:0,35,133	0/0:25,0:25:72.23:0,72,966	0/1:22,0:22:64.65:65,0,94	0/0:25,0:25:14.60:0,15,172	0/0:25,1:26:3.60:0,4,158	0/1:23,0:23:29.59:30,0,69	0/0:22,0:22:36.79:0,37,182	0/0:13,0:13:28.46:0,28,105	0/0:19,0:19:16.65:0,17,145	0/1:22,1:23:48.64:49,0,146	0/1:16,2:18:58.44:63,0,58	1/1:2,15:17:36.10:408,36,0	1/1:2,27:29:78.19:864,78,0	1/1:1,24:25:66.19:745,66,0	1/1:0,5:5:15.04:170,15,0
chr10	19933726	.	TTCTCTCTCTCTCTCTC	T	3913.36	PASS	AB=0.887;AC=21;AF=0.389;AN=54;BaseQRankSum=7.394;DP=543;FS=0.861;HRun=0;HaplotypeScore=216.6694;InbreedingCoeff=0.4559;MQ=66.84;MQ0=8;MQRankSum=-5.749;QD=16.72;ReadPosRankSum=-0.555;VQSLOD=2.5122;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:24.08:0,24,1189	0/0:9,0:9:4.92:0,5,155	0/0:32,0:22:6.02:0,6,132	0/0:25,0:14:4.06:0,4,45	0/0:31,0:31:36.12:0,36,1672	0/0:19,0:19:21.07:0,21,884	0/0:22,0:24:33.10:0,33,1017	0/0:26,0:26:10.37:0,10,295	0/0:16,0:19:30.10:0,30,1708	1/1:19,2:21:4.72:368,5,0	1/1:11,1:12:3.01:131,3,0	0/1:19,5:25:8.06:439,0,8	1/1:10,2:16:18.06:614,18,0	1/1:13,0:13:3.01:45,3,0	0/0:17,0:19:36.12:0,36,1750	1/1:8,6:13:15.05:657,15,0	1/1:18,1:20:8.94:259,9,0	./.	0/1:15,0:15:16.96:125,0,17	0/1:20,7:28:9.48:379,0,9	0/1:15,0:15:14.99:15,0,50	1/1:13,3:17:8.67:393,9,0	0/1:14,3:17:35.55:227,0,36	1/1:14,6:19:6.02:263,6,0	0/0:13,0:14:27.09:0,27,911	0/0:21,0:23:45.15:0,45,2030	0/0:21,0:21:33.58:0,34,1417	0/0:15,0:17:24.08:0,24,932
chr10	19935232	.	TCTCCGGGG	T	6441.24	PASS	AB=0.973;AC=42;AF=0.750;AN=56;BaseQRankSum=3.895;DP=514;FS=0.000;HRun=0;HaplotypeScore=223.2328;InbreedingCoeff=-0.0287;MQ=34.85;MQ0=14;MQRankSum=-0.307;QD=13.85;ReadPosRankSum=4.771;VQSLOD=3.0635;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:16,0:15:13.08:13,0,36	1/1:6,0:6:8.95:128,9,0	0/0:27,0:4:9.50:0,10,193	0/0:22,0:1:3.01:0,3,31	1/1:13,0:14:6.02:102,6,0	1/1:16,0:15:14.40:97,14,0	0/1:17,1:16:31.03:104,0,31	0/1:21,0:21:99:316,0,216	0/1:19,0:19:42.99:77,0,43	1/1:27,1:27:20.36:1110,20,0	1/1:17,0:17:6.46:54,6,0	1/1:19,1:20:30.48:473,30,0	1/1:25,1:26:6.17:623,6,0	1/1:20,0:20:15.03:241,15,0	0/1:33,0:33:99:176,0,205	0/1:24,0:23:14.07:328,0,14	1/1:14,0:13:12.19:179,12,0	1/1:11,0:11:5.68:313,6,0	1/1:14,0:14:9.29:511,9,0	0/1:22,0:21:0.59:179,0,1	1/1:11,0:10:0.94:2,1,0	0/1:28,1:29:9.97:195,0,10	1/1:19,0:19:6.45:50,6,0	1/1:25,0:25:8.21:73,8,0	1/1:6,0:8:3.01:54,3,0	1/1:10,2:12:28.56:482,29,0	0/1:10,1:11:7.22:379,0,7	0/1:6,0:6:1.86:181,0,2
chr10	19935234	.	TCCGGGG	T	7704.72	PASS	AB=0.839;AC=47;AF=0.839;AN=56;BaseQRankSum=0.673;DP=499;FS=6.760;HRun=0;HaplotypeScore=208.7597;InbreedingCoeff=0.1881;MQ=34.96;MQ0=14;MQRankSum=0.388;QD=16.97;ReadPosRankSum=2.984;VQSLOD=3.7116;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:13,1:14:13.13:13,0,30	1/1:5,1:6:8.95:109,9,0	0/0:26,0:4:9.03:0,9,192	0/0:19,0:1:3.01:0,3,31	1/1:11,1:13:5.99:65,6,0	1/1:15,1:16:14.62:148,15,0	1/1:16,2:16:8.70:126,9,0	0/1:17,3:20:61.58:384,0,62	0/1:18,1:19:19.76:133,0,20	1/1:24,3:26:75.25:1289,75,0	1/1:14,2:16:6.49:103,6,0	1/1:19,1:20:30.57:585,31,0	1/1:23,1:24:39.13:791,39,0	1/1:18,2:20:18.05:290,18,0	0/1:29,3:33:53.05:308,0,53	1/1:23,1:23:25.59:410,26,0	1/1:13,0:12:12.87:205,13,0	1/1:9,1:10:27.04:410,27,0	1/1:10,4:14:33.11:629,33,0	1/1:22,0:21:18.96:301,19,0	1/1:3,7:10:0.94:1,1,0	1/1:27,2:29:14.42:240,14,0	1/1:18,1:19:9.02:123,9,0	1/1:22,1:23:7.78:95,8,0	1/1:6,2:8:3.01:41,3,0	1/1:14,1:12:27.04:414,27,0	1/1:12,1:11:0.42:307,0,0	0/1:2,2:6:1.74:184,0,2
chr10	19935235	.	CCGGGGGTG	C	9200.26	PASS	AB=0.962;AC=43;AF=0.768;AN=56;BaseQRankSum=-5.781;DP=483;FS=27.234;HRun=0;HaplotypeScore=207.5567;InbreedingCoeff=0.1777;MQ=35.02;MQ0=15;MQRankSum=0.935;QD=21.80;ReadPosRankSum=0.925;VQSLOD=2.9682;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:14:5.81:0,6,57	0/1:6,0:6:18.06:40,0,18	0/0:26,0:4:8.86:0,9,251	0/0:20,0:1:3.01:0,3,35	1/1:12,0:12:2.49:9,2,0	0/1:14,0:15:28.23:73,0,28	0/1:16,0:16:7.81:114,0,8	1/1:5,0:13:30.49:545,30,0	0/1:15,0:17:15.83:103,0,16	1/1:9,17:25:75.26:2033,75,0	1/1:4,12:16:6.49:142,6,0	1/1:8,10:20:30.56:673,31,0	1/1:9,9:22:42.06:934,42,0	1/1:6,11:20:18.06:444,18,0	0/1:33,0:33:99:102,0,266	1/1:8,8:21:29.73:687,30,0	1/1:2,7:12:12.60:303,13,0	1/1:6,2:10:27.56:665,28,0	1/1:6,5:14:36.11:834,36,0	1/1:5,13:21:21.11:491,21,0	1/1:9,0:10:0.94:2,1,0	1/1:9,17:29:16.39:249,16,0	1/1:5,13:19:9.03:192,9,0	1/1:8,7:22:8.24:123,8,0	1/1:8,0:8:2.50:9,2,0	1/1:14,0:11:9.27:188,9,0	0/1:13,0:11:73.96:174,0,74	0/1:6,0:6:2.73:72,0,3
chr10	19935254	.	T	TAAG	239.09	PASS	AB=0.983;AC=14;AF=0.250;AN=56;BaseQRankSum=-0.110;DP=551;FS=1.715;HRun=0;HaplotypeScore=268.2924;InbreedingCoeff=-0.0709;MQ=32.52;MQ0=15;MQRankSum=-5.007;QD=1.06;ReadPosRankSum=-3.041;VQSLOD=1.7651;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:21,0:20:8.48:8,0,94	0/0:13,0:13:12.02:0,12,169	0/0:32,0:4:9.03:0,9,167	0/0:26,0:5:3.05:0,3,210	0/0:20,0:20:2.99:0,3,63	0/0:17,0:16:18.06:0,18,293	0/0:19,0:17:9.76:0,10,142	0/1:15,4:19:99:239,0,446	0/0:20,0:20:9.18:0,9,269	0/0:28,0:27:40.35:0,40,962	0/1:15,0:15:0.11:0,0,0	0/1:20,0:20:5.15:5,0,180	0/1:21,0:21:41.77:42,0,305	0/1:17,0:17:9.16:9,0,28	0/0:36,0:36:39.13:0,39,732	0/1:22,0:21:29.10:29,0,161	0/1:14,0:13:3.24:3,0,43	0/0:9,0:9:5.97:0,6,265	0/0:14,0:13:4.50:0,5,264	0/1:23,0:22:17.28:17,0,141	0/1:14,0:13:0.77:1,0,50	1/1:22,0:22:0.98:3,1,0	1/1:18,0:18:2.32:6,2,0	0/0:29,0:29:2.32:0,2,46	0/0:14,0:14:3.01:0,3,63	0/0:29,0:26:69.19:0,69,1192	0/0:15,0:13:30.10:0,30,518	0/0:4,0:4:9.03:0,9,160
chr10	19935264	.	TAAG	T	287.57	PASS	AB=0.802;AC=5;AF=0.089;AN=56;BaseQRankSum=-3.972;DP=507;FS=60.126;HRun=0;HaplotypeScore=267.2843;InbreedingCoeff=-0.1037;MQ=32.07;MQ0=6;MQRankSum=-1.150;QD=3.34;ReadPosRankSum=0.729;VQSLOD=0.6502;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,2:20:39.35:0,39,593	0/0:10,1:11:29.97:0,30,500	0/0:17,0:4:11.34:0,11,98	0/0:21,0:11:19.55:0,20,181	0/0:15,2:17:33.11:0,33,545	0/1:16,1:17:8.95:9,0,595	0/0:15,2:15:26.91:0,27,515	0/0:24,0:24:60.63:0,61,1333	0/1:17,3:20:9.36:9,0,685	0/0:24,0:24:68.97:0,69,1441	0/0:15,0:15:23.97:0,24,426	0/0:19,0:19:44.45:0,44,844	0/0:21,0:21:54.17:0,54,1000	0/0:18,0:18:28.48:0,28,604	0/0:28,0:28:56.90:0,57,1078	0/0:18,0:17:41.33:0,41,698	0/0:11,0:10:3.24:0,3,211	0/0:11,0:11:32.32:0,32,680	0/0:11,0:10:24.08:0,24,524	0/0:19,0:18:41.77:0,42,660	0/0:14,0:13:17.93:0,18,339	0/0:23,0:23:47.95:0,48,809	0/0:21,0:21:51.14:0,51,876	0/0:27,0:27:13.63:0,14,271	0/0:8,5:13:24.08:0,24,389	0/1:19,10:26:99:213,0,1140	0/1:14,3:15:66.73:67,0,783	0/1:1,2:3:62.39:102,0,62
chr10	19935277	.	T	TA	15346.97	PASS	AB=0.929;AC=54;AF=0.964;AN=56;BaseQRankSum=2.017;DP=497;FS=4.035;HRun=1;HaplotypeScore=218.5903;InbreedingCoeff=0.1802;MQ=44.07;MQ0=1;MQRankSum=-6.958;QD=30.88;ReadPosRankSum=-0.758;VQSLOD=4.0898;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,18:21:42.08:604,42,0	1/1:1,11:12:33.08:469,33,0	0/1:15,2:11:62.03:62,0,139	0/1:24,1:20:3.81:4,0,219	1/1:1,16:18:41.97:528,42,0	1/1:3,10:15:29.79:482,30,0	1/1:6,15:18:33.05:467,33,0	1/1:3,25:28:75.22:1093,75,0	1/1:2,17:19:57.09:780,57,0	1/1:1,24:25:69.23:1032,69,0	1/1:2,10:12:30.02:399,30,0	1/1:3,16:20:48.07:717,48,0	1/1:1,24:25:72.13:1002,72,0	1/1:1,15:16:42.06:578,42,0	1/1:1,19:20:54.18:808,54,0	1/1:2,14:16:45.09:626,45,0	1/1:2,8:10:24.04:322,24,0	1/1:0,12:12:33.11:494,33,0	1/1:1,16:17:45.15:670,45,0	1/1:1,12:13:33.11:494,33,0	1/1:5,9:13:15.05:224,15,0	1/1:1,19:20:51.13:738,51,0	1/1:2,20:22:45.15:673,45,0	1/1:2,21:23:20.55:265,21,0	1/1:1,9:10:24.08:359,24,0	1/1:5,18:23:54.18:800,54,0	1/1:3,12:16:44.98:611,45,0	1/1:1,1:2:3.01:45,3,0
chr10	19935423	.	G	GGA	5214.76	PASS	AB=0.881;AC=37;AF=0.661;AN=56;BaseQRankSum=3.007;DP=482;FS=1.146;HRun=0;HaplotypeScore=74.7576;InbreedingCoeff=-0.0674;MQ=66.20;MQ0=7;MQRankSum=1.356;QD=12.27;ReadPosRankSum=4.649;VQSLOD=4.4908;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:3,10:13:15.32:269,0,15	1/1:2,6:6:6.02:92,6,0	0/0:20,0:11:11.95:0,12,123	0/1:40,0:20:39.12:39,0,81	1/1:15,4:19:2.69:455,3,0	1/1:3,13:16:18.06:276,18,0	1/1:3,12:15:15.05:242,15,0	0/1:24,0:24:12.17:12,0,366	0/0:14,0:15:23.99:0,24,258	0/1:16,0:16:30.03:208,0,30	0/1:13,0:13:3.64:153,0,4	1/1:6,0:6:9.02:92,9,0	1/1:20,0:20:6.41:270,6,0	1/1:17,0:17:24.06:267,24,0	0/0:21,0:20:51.14:0,51,608	1/1:22,0:22:27.06:284,27,0	0/1:15,0:15:9.33:221,0,9	1/1:11,0:10:15.03:149,15,0	1/1:12,0:12:15.02:148,15,0	0/1:13,0:13:14.78:156,0,15	0/1:22,0:21:17.16:129,0,17	0/1:18,0:18:6.55:123,0,7	1/1:7,0:7:9.01:85,9,0	0/1:17,0:17:22.11:240,0,22	1/1:7,12:20:6.12:275,6,0	0/1:12,9:21:27.66:559,0,28	0/1:7,10:15:45.69:311,0,46	0/1:6,14:18:22.26:157,0,22
chr10	19935439	.	A	AGG	6223.85	PASS	AB=1.000;AC=37;AF=0.661;AN=56;BaseQRankSum=-2.067;DP=506;FS=3.312;HRun=3;HaplotypeScore=75.8383;InbreedingCoeff=0.2439;MQ=75.25;MQ0=6;MQRankSum=0.254;QD=16.17;ReadPosRankSum=7.197;VQSLOD=1.7808;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:10,0:10:40.78:132,0,41	0/1:11,0:9:31.41:31,0,77	0/0:18,0:14:32:0,32,334	0/0:32,0:20:10.02:0,10,269	0/1:21,0:22:99:164,0,105	0/1:19,0:18:25.94:116,0,26	0/1:19,0:18:75.58:98,0,76	0/0:36,0:36:60.65:0,61,765	0/0:14,0:14:30.03:0,30,358	1/1:9,6:15:29.61:557,30,0	1/1:1,13:14:23.96:348,24,0	1/1:1,7:8:9.03:164,9,0	1/1:3,19:22:27.56:492,28,0	1/1:2,19:22:24.08:437,24,0	0/0:21,0:20:63.09:0,63,787	1/1:1,19:21:27.09:493,27,0	1/1:1,15:16:14.89:426,15,0	1/1:1,11:11:15.05:274,15,0	1/1:4,4:8:21.06:329,21,0	1/1:0,16:17:29.93:408,30,0	1/1:3,19:21:7.06:263,7,0	1/1:1,18:19:17.92:301,18,0	1/1:1,14:15:8.86:160,9,0	1/1:3,19:22:19.68:483,20,0	0/1:15,0:15:34.18:120,0,34	0/1:18,0:19:99:222,0,104	0/1:17,0:15:99:139,0,133	0/1:20,0:18:64.31:64,0,65
chr10	19936172	.	T	TC	231.45	PASS	AB=0.857;AC=29;AF=0.906;AN=32;BaseQRankSum=-1.561;DP=39;FS=4.559;HRun=1;HaplotypeScore=34.3366;InbreedingCoeff=0.1075;MQ=41.50;MQ0=0;MQRankSum=1.214;QD=7.98;ReadPosRankSum=-1.214;VQSLOD=0.3882;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/1:1,3:4:6.05:6,0,6	1/1:3,0:3:4.07:12,4,0	./.	./.	1/1:1,0:1:2.22:7,2,0	1/1:1,0:1:3:25,3,0	1/1:1,0:1:2.96:19,3,0	./.	1/1:1,0:1:3:29,3,0	./.	./.	1/1:0,1:1:1.55:4,2,0	./.	1/1:1,0:1:2.97:20,3,0	./.	1/1:1,0:1:2.98:22,3,0	1/1:1,1:2:5.86:35,6,0	./.	./.	0/1:1,0:1:0:0,0,0	1/1:1,0:1:3:25,3,0	./.	./.	1/1:3,1:4:5.99:50,6,0	1/1:3,0:3:5.05:19,5,0	1/1:1,2:3:5.59:35,6,0	0/1:1,0:1:0:0,0,0
chr10	19937463	.	A	ACTCC	23185.18	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-14.707;DP=682;FS=1.328;HRun=0;HaplotypeScore=109.3334;InbreedingCoeff=0.9842;MQ=75.65;MQ0=2;MQRankSum=-5.646;QD=61.83;ReadPosRankSum=3.547;VQSLOD=6.7512;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,123,2296	0/0:7,0:7:18.06:0,18,336	0/0:11,0:11:27.07:0,27,471	0/0:21,0:21:52.99:0,53,872	0/0:19,0:19:57.16:0,57,998	0/0:27,0:26:69.22:0,69,1254	0/0:32,0:32:81.28:0,81,1512	0/0:25,0:25:60.21:0,60,1111	0/0:23,0:23:66.23:0,66,1232	1/1:1,17:18:54.19:1429,54,0	1/1:4,20:26:54.19:1424,54,0	1/1:1,21:23:60.21:1594,60,0	1/1:4,19:24:60.04:1544,60,0	1/1:1,28:31:78.27:2029,78,0	0/0:18,0:18:51.17:0,51,944	1/1:2,24:27:60.21:1600,60,0	1/1:5,34:38:96.33:2560,96,0	1/1:2,29:32:84.29:2239,84,0	1/1:8,12:20:57.20:1410,57,0	1/1:2,15:19:48.08:1120,48,0	1/1:6,33:40:81.74:2160,82,0	1/1:4,19:24:42.14:1092,42,0	1/1:4,16:20:38.67:1032,39,0	1/1:1,29:30:75.26:1953,75,0	0/0:15,0:15:45.15:0,45,839	0/0:28,0:28:6.34:0,6,1432	0/0:31,0:31:87.28:0,87,1592	0/0:6,0:6:18.06:0,18,336
chr10	19937681	.	TGC	T	786.24	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.002;DP=738;FS=3.115;HRun=0;HaplotypeScore=83.4112;InbreedingCoeff=0.9998;MQ=87.06;MQ0=0;MQRankSum=-0.915;QD=37.44;ReadPosRankSum=1.287;VQSLOD=5.8411;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:61,0:61:99:0,181,3636	0/0:14,0:14:39.13:0,39,782	0/0:27,0:27:74.40:0,74,1453	0/0:32,0:31:78.24:0,78,1528	0/0:15,0:15:45.14:0,45,873	0/0:23,0:23:69.24:0,69,1402	0/0:27,0:27:81.26:0,81,1592	0/0:36,0:36:99:0,108,2164	1/1:0,21:21:54.18:881,54,0	0/0:26,0:26:78.26:0,78,1551	0/0:21,0:21:63.22:0,63,1276	0/0:29,0:29:81.01:0,81,1610	0/0:30,0:30:90.31:0,90,1816	0/0:26,0:26:78.25:0,78,1518	0/0:40,0:40:99:0,120,2420	0/0:27,0:27:81.28:0,81,1630	0/0:28,0:28:81.28:0,81,1627	0/0:20,0:20:54.19:0,54,1096	0/0:25,0:25:75.25:0,75,1476	0/0:21,0:21:57.20:0,57,1158	0/0:44,0:44:99:0,126,2543	0/0:17,0:17:51.18:0,51,1036	0/0:13,0:13:39.11:0,39,743	0/0:34,0:34:99:0,102,2039	0/0:23,0:23:69.24:0,69,1402	0/0:25,0:25:75.26:0,75,1516	0/0:20,0:20:60.21:0,60,1204	0/0:13,0:13:39.13:0,39,792
chr10	19941018	.	TTCAACAGC	T	15397.41	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=16.180;DP=639;FS=3.310;HRun=0;HaplotypeScore=180.1321;InbreedingCoeff=0.9896;MQ=95.57;MQ0=0;MQRankSum=-18.364;QD=56.40;ReadPosRankSum=5.158;VQSLOD=4.3633;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,147,6109	0/0:11,0:11:33.08:0,33,1294	0/0:34,0:34:99:0,102,3879	0/0:35,0:36:99:0,105,3797	0/0:15,0:15:42.14:0,42,1787	0/0:18,0:18:54.19:0,54,2299	0/0:30,0:30:90.31:0,90,3951	0/0:38,0:38:99:0,108,4559	0/0:22,0:22:66.23:0,66,2827	1/1:2,21:23:63.19:1742,63,0	1/1:0,25:25:57.20:1633,57,0	1/1:1,21:22:45.15:1259,45,0	1/1:0,19:20:51.18:1462,51,0	1/1:1,27:28:66.23:1845,66,0	0/0:43,0:43:99:0,129,5567	1/1:0,20:20:51.18:1460,51,0	1/1:3,17:20:33.11:946,33,0	1/1:1,10:11:18.06:516,18,0	1/1:1,13:14:39.13:1025,39,0	1/1:3,16:19:42.14:1142,42,0	1/1:4,12:16:9.50:248,10,0	1/1:2,12:14:30.10:847,30,0	1/1:4,14:18:24.55:689,25,0	1/1:1,22:23:21.07:584,21,0	0/0:19,0:19:57.20:0,57,2451	0/0:21,0:21:63.22:0,63,2753	0/0:23,0:22:69.21:0,69,2663	0/0:7,0:7:18.06:0,18,805
chr10	19941749	.	G	GTGTGTGTG	2919.29	PASS	AB=1.000;AC=35;AF=0.673;AN=52;BaseQRankSum=-5.163;DP=570;FS=11.246;HRun=0;HaplotypeScore=145.1152;InbreedingCoeff=0.1759;MQ=47.78;MQ0=10;MQRankSum=-0.805;QD=6.68;ReadPosRankSum=-5.145;VQSLOD=-0.1115;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:36,0:36:53.17:53,0,98	0/1:8,0:8:18:18,0,18	./.	./.	0/1:25,0:25:42.76:216,0,43	0/0:21,0:21:32.68:0,33,564	0/0:21,0:21:13.18:0,13,242	1/1:31,0:31:3.13:7,3,0	0/0:14,0:14:15.18:0,15,330	1/1:25,5:29:28.21:576,28,0	1/1:19,0:19:3.01:69,3,0	1/1:22,0:21:5.77:186,6,0	1/1:15,0:15:14.97:261,15,0	1/1:17,0:17:5.35:181,5,0	0/0:14,0:14:27.08:0,27,603	1/1:12,0:12:12.04:378,12,0	0/1:32,0:31:33.43:260,0,33	1/1:24,0:24:12.02:302,12,0	1/1:14,0:13:6.96:101,7,0	1/1:20,0:20:2.50:64,2,0	0/1:27,0:25:0:0,0,1	1/1:18,0:18:2.58:24,3,0	0/1:6,0:6:0:0,0,0	1/1:19,0:18:2.43:64,2,0	0/1:24,0:24:16.19:16,0,73	0/1:17,0:17:99:116,0,128	1/1:14,0:14:10.67:146,11,0	0/1:6,0:6:6.81:40,0,7
chr10	19942280	.	AC	A	22532.20	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=13.877;DP=762;FS=7.522;HRun=1;HaplotypeScore=121.7499;InbreedingCoeff=1.0000;MQ=63.09;MQ0=0;MQRankSum=-0.114;QD=39.95;ReadPosRankSum=6.519;VQSLOD=3.5680;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,42:42:99:1678,120,0	1/1:0,11:11:33.11:462,33,0	0/0:21,0:21:57.19:0,57,888	0/0:24,0:22:57.27:0,57,816	1/1:0,21:21:57.19:797,57,0	0/0:25,0:25:75.26:0,75,1196	0/0:31,0:31:93.30:0,93,1454	0/0:32,0:32:96.31:0,96,1511	0/0:27,0:27:81.28:0,81,1295	1/1:0,29:29:87.29:1217,87,0	1/1:0,20:20:57.19:797,57,0	1/1:0,21:21:60.20:839,60,0	1/1:0,27:27:78.26:1091,78,0	1/1:0,33:33:93.31:1301,93,0	0/0:38,0:38:99:0,114,1807	1/1:0,37:37:99:1468,105,0	1/1:0,25:25:75.25:1049,75,0	1/1:0,30:30:84.28:1175,84,0	1/1:0,17:17:51.15:695,51,0	1/1:1,16:17:48.16:671,48,0	1/1:0,47:47:99:1888,135,0	1/1:0,25:25:72.24:1007,72,0	1/1:0,24:24:63.21:881,63,0	1/1:0,29:29:78.26:1091,78,0	1/1:0,25:25:75.25:1048,75,0	1/1:0,30:30:90.30:1259,90,0	1/1:0,29:29:78.20:1070,78,0	1/1:0,25:25:75.25:1049,75,0
chr10	19942517	.	T	TATAC	10564.23	PASS	AB=0.746;AC=25;AF=0.481;AN=52;BaseQRankSum=-10.692;DP=772;FS=3.783;HRun=0;HaplotypeScore=154.4424;InbreedingCoeff=0.4482;MQ=60.25;MQ0=5;MQRankSum=0.700;QD=22.92;ReadPosRankSum=0.105;VQSLOD=4.7497;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:36.05:0,36,348	0/0:13,0:13:18.04:0,18,178	./.	./.	0/0:26,0:26:30.06:0,30,295	0/0:30,0:29:48.13:0,48,687	0/0:31,0:31:42.05:0,42,516	0/0:44,0:44:14.68:0,15,105	0/1:18,15:35:53.46:715,0,53	1/1:18,19:39:63.15:1318,63,0	1/1:18,8:26:33.10:706,33,0	0/1:17,18:35:1.15:939,0,1	1/1:11,17:28:42.14:983,42,0	0/1:21,13:35:57.96:600,0,58	0/0:30,0:30:54.14:0,54,766	0/1:13,10:24:19.21:535,0,19	1/1:10,9:20:21.07:492,21,0	1/1:10,1:18:17.09:267,17,0	0/1:20,4:24:74.55:243,0,75	1/1:15,17:32:4.14:540,4,0	1/1:9,21:31:54.14:1215,54,0	1/1:14,14:29:23.98:562,24,0	0/1:15,14:30:7.95:804,0,8	1/1:14,11:25:4.14:539,4,0	0/0:28,0:28:51.08:0,51,504	0/1:28,1:28:99:105,0,229	0/0:22,0:22:48.08:0,48,467	0/0:14,0:14:9.02:0,9,89
chr10	19942559	.	TACAC	T	5006.94	PASS	AB=0.568;AC=13;AF=0.232;AN=56;BaseQRankSum=-2.281;DP=829;FS=21.860;HRun=0;HaplotypeScore=206.7300;InbreedingCoeff=0.8864;MQ=65.84;MQ0=11;MQRankSum=-0.715;QD=29.11;ReadPosRankSum=3.286;VQSLOD=3.0891;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,11:30:74.98:980,75,0	1/1:0,15:15:18.06:331,18,0	0/0:42,0:23:65.93:0,66,612	0/0:31,0:25:69.64:0,70,661	1/1:15,10:25:66.03:823,66,0	0/0:29,0:29:78.07:0,78,1443	0/0:42,0:42:76.31:0,76,1325	0/0:43,0:41:99:0,108,1065	0/0:38,0:38:81.02:0,81,1249	0/0:36,0:35:99:0,99,1656	0/0:23,0:23:62.92:0,63,966	0/0:38,0:38:98.70:0,99,1421	0/0:30,0:30:74.11:0,74,1119	0/0:32,0:32:72.03:0,72,1056	0/0:26,0:26:75.14:0,75,1559	0/0:26,0:26:63.06:0,63,868	0/0:31,0:31:77.94:0,78,958	0/0:19,0:19:41.85:0,42,498	0/0:24,0:20:51.06:0,51,711	0/0:33,0:33:67.74:0,68,908	0/0:44,0:44:99:0,108,1571	0/0:25,0:25:55.11:0,55,753	0/0:24,0:24:61.67:0,62,971	0/0:21,0:21:50.71:0,51,698	1/1:21,14:35:99:1346,105,0	0/1:5,16:20:97.25:537,0,97	1/1:1,30:31:45.13:825,45,0	1/1:2,13:15:9.03:165,9,0
chr10	19942712	.	T	TA	28146.32	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-10.689;DP=742;FS=4.173;HRun=0;HaplotypeScore=64.0930;InbreedingCoeff=0.9973;MQ=82.23;MQ0=0;MQRankSum=-9.835;QD=42.39;ReadPosRankSum=5.089;VQSLOD=5.3540;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:3,39:42:99:1677,105,0	1/1:0,8:8:24.08:383,24,0	0/0:27,0:27:72.28:0,72,965	0/0:23,0:23:56.81:0,57,726	1/1:2,16:18:45.15:718,45,0	1/1:0,18:18:51.17:815,51,0	1/1:1,28:29:75.26:1197,75,0	1/1:0,42:42:99:1865,120,0	1/1:0,35:35:87.30:1388,87,0	1/1:1,29:30:87.30:1391,87,0	1/1:0,11:11:30.10:477,30,0	1/1:1,32:33:87.30:1390,87,0	1/1:0,40:40:99:1630,102,0	1/1:1,27:28:66.22:1050,66,0	0/0:28,0:28:84.23:0,84,1114	1/1:0,24:24:69.24:1102,69,0	1/1:1,37:38:99:1582,99,0	1/1:0,16:16:48.16:767,48,0	1/1:1,28:29:84.28:1305,84,0	1/1:0,19:19:51.17:815,51,0	1/1:1,53:54:99:2347,148,0	1/1:1,35:38:99:1607,102,0	1/1:2,7:9:21.07:333,21,0	1/1:0,28:28:69.24:1103,69,0	1/1:0,16:16:45.15:719,45,0	1/1:0,21:21:60.16:906,60,0	1/1:1,26:27:72.25:1149,72,0	1/1:1,10:11:27.09:431,27,0
chr10	19943249	.	GT	G	7010.52	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=14.662;DP=794;FS=0.603;HRun=5;HaplotypeScore=76.6152;InbreedingCoeff=0.9973;MQ=84.37;MQ0=0;MQRankSum=-4.033;QD=30.61;ReadPosRankSum=0.547;VQSLOD=5.2781;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,67:69:99:2143,190,0	1/1:0,8:8:18.05:204,18,0	0/0:29,0:29:69.19:0,69,890	0/0:25,0:25:69.21:0,69,896	1/1:1,28:29:81.23:918,81,0	0/0:30,0:30:87.22:0,87,1151	0/0:36,0:36:99:0,99,1343	1/1:1,28:29:84.24:952,84,0	0/0:18,0:18:54.17:0,54,723	0/0:30,0:30:84.27:0,84,1134	0/0:21,0:21:57.17:0,57,763	0/0:29,0:29:87.29:0,87,1189	0/0:31,0:31:84.28:0,84,1144	0/0:31,0:31:90.30:0,90,1231	0/0:31,0:31:93.28:0,93,1241	0/0:31,0:31:90.26:0,90,1207	0/0:32,0:32:96.32:0,96,1313	0/0:34,0:34:99:0,102,1395	0/0:20,0:20:51.17:0,51,696	0/0:21,0:21:57.19:0,57,780	0/0:30,0:30:87.29:0,87,1183	0/0:25,0:25:72.24:0,72,985	0/0:29,0:29:84.26:0,84,1131	0/0:32,0:32:93.27:0,93,1247	1/1:4,20:24:57.16:646,57,0	1/1:1,30:31:52.16:957,52,0	1/1:3,30:33:87.25:986,87,0	1/1:0,6:6:18.05:204,18,0
chr10	19944390	.	C	CTG	18394.82	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=16.088;DP=686;FS=0.000;HRun=0;HaplotypeScore=118.8048;InbreedingCoeff=0.9987;MQ=81.38;MQ0=0;MQRankSum=-4.715;QD=40.97;ReadPosRankSum=4.747;VQSLOD=6.6161;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,135,1796	0/0:11,0:11:30.10:0,30,420	0/0:19,0:19:51.03:0,51,639	0/0:24,0:24:31.84:0,32,761	0/0:19,0:19:48.16:0,48,671	1/1:22,0:22:60.21:1044,60,0	1/1:32,0:32:74.93:1191,75,0	0/0:22,0:22:60.19:0,60,826	1/1:23,0:23:54.16:629,54,0	1/1:31,0:31:81.25:1311,81,0	1/1:31,0:31:78.23:1281,78,0	1/1:28,0:28:78.25:1317,78,0	1/1:19,0:19:54.18:943,54,0	1/1:24,0:24:60.21:1042,60,0	0/0:30,0:30:90.30:0,90,1259	1/1:28,0:28:75.23:1241,75,0	1/1:32,0:32:90.28:1545,90,0	1/1:19,2:21:60.21:1051,60,0	1/1:13,0:13:21.07:358,21,0	1/1:25,4:29:66.23:1158,66,0	1/1:35,0:35:75.20:1229,75,0	1/1:28,0:28:69.21:1150,69,0	1/1:27,0:27:50.72:861,51,0	1/1:26,0:26:63.17:1045,63,0	0/0:25,0:25:72.23:0,72,990	0/0:18,0:18:51.15:0,51,670	0/0:17,0:17:51.17:0,51,711	0/0:7,0:7:21.07:0,21,294
chr10	19944391	.	T	TGT	18335.86	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=16.074;DP=691;FS=0.000;HRun=0;HaplotypeScore=119.1104;InbreedingCoeff=0.9987;MQ=81.22;MQ0=0;MQRankSum=-3.813;QD=40.66;ReadPosRankSum=4.827;VQSLOD=6.6634;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,135,1796	0/0:11,0:11:30.10:0,30,420	0/0:18,0:18:51.03:0,51,639	0/0:25,0:25:31.84:0,32,761	0/0:19,0:19:48.16:0,48,671	1/1:23,0:23:60.21:1044,60,0	1/1:31,0:31:74.93:1191,75,0	0/0:24,0:24:60.19:0,60,826	1/1:23,0:23:54.16:629,54,0	1/1:30,0:30:81.25:1311,81,0	1/1:30,0:30:78.23:1281,78,0	1/1:27,0:27:78.25:1317,78,0	1/1:20,0:20:54.18:943,54,0	1/1:26,0:26:60.21:1042,60,0	0/0:30,0:30:90.30:0,90,1259	1/1:28,0:28:72.22:1203,72,0	1/1:32,0:32:90.28:1545,90,0	1/1:21,0:21:60.21:1051,60,0	1/1:13,0:13:21.04:336,21,0	1/1:29,0:29:66.23:1158,66,0	1/1:36,0:36:75.20:1229,75,0	1/1:28,0:28:69.21:1150,69,0	1/1:23,4:28:50.72:861,51,0	1/1:26,0:26:63.17:1045,63,0	0/0:25,0:25:72.23:0,72,990	0/0:18,0:18:51.15:0,51,670	0/0:17,0:17:51.17:0,51,711	0/0:7,0:7:21.07:0,21,294
chr10	19944392	.	G	GTC	10332.33	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=18.663;DP=695;FS=0.617;HRun=0;HaplotypeScore=148.8560;InbreedingCoeff=0.9815;MQ=81.12;MQ0=0;MQRankSum=-4.895;QD=22.91;ReadPosRankSum=7.495;VQSLOD=5.2329;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,138,2079	0/0:11,0:11:33.10:0,33,484	0/0:17,0:17:51.17:0,51,731	0/0:26,0:26:60.79:0,61,880	0/0:19,0:19:54.15:0,54,784	1/1:23,0:23:38.19:559,38,0	1/1:31,0:31:50.42:639,50,0	0/0:25,0:25:69.19:0,69,995	1/1:2,20:22:54.19:1041,54,0	1/1:29,0:29:54.99:595,55,0	1/1:30,0:30:50.01:646,50,0	1/1:28,0:28:75.89:700,76,0	1/1:20,0:20:33.19:530,33,0	1/1:22,1:26:17.30:585,17,0	0/0:31,0:31:90.31:0,90,1378	1/1:28,0:28:44.13:606,44,0	1/1:32,0:32:87.13:838,87,0	1/1:21,0:21:60.08:577,60,0	1/1:12,0:12:5.55:223,6,0	1/1:32,0:32:66.01:633,66,0	1/1:36,0:36:45.14:590,45,0	1/1:28,0:28:42.61:603,43,0	1/1:28,0:28:26.32:424,26,0	1/1:25,0:25:56.55:545,57,0	0/0:25,0:25:72.24:0,72,1101	0/0:18,0:18:54.18:0,54,806	0/0:17,0:17:51.17:0,51,781	0/0:7,0:7:21.07:0,21,322
chr10	19944394	.	G	GT	9392.26	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=19.446;DP=694;FS=0.000;HRun=1;HaplotypeScore=135.9262;InbreedingCoeff=0.9850;MQ=84.09;MQ0=0;MQRankSum=-5.136;QD=21.25;ReadPosRankSum=7.729;VQSLOD=4.5549;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,144,1958	0/0:10,0:10:30.10:0,30,420	0/0:19,0:19:57.03:0,57,702	0/0:29,0:29:58.58:0,59,882	0/0:19,0:19:57.18:0,57,776	1/1:2,21:23:49.31:539,49,0	1/1:6,21:29:61.28:636,61,0	0/0:25,0:25:75.25:0,75,1036	1/1:22,0:22:46.80:180,47,0	1/1:6,22:28:56.80:718,57,0	1/1:4,25:30:64.42:667,64,0	1/1:6,22:28:56.70:698,57,0	1/1:2,19:21:33.22:453,33,0	1/1:7,19:26:38.57:522,39,0	0/0:31,0:31:93.31:0,93,1297	1/1:4,22:26:67.42:636,67,0	1/1:4,29:33:78.96:837,79,0	1/1:3,19:22:59.81:558,60,0	1/1:3,6:9:6.43:145,6,0	1/1:9,24:33:22.28:548,22,0	1/1:6,28:34:56.79:635,57,0	1/1:4,23:27:66.84:594,67,0	1/1:9,18:27:46.35:458,46,0	1/1:4,20:24:59.45:570,59,0	0/0:25,0:25:72.23:0,72,990	0/0:19,0:19:51.17:0,51,713	0/0:19,0:19:54.17:0,54,739	0/0:7,0:7:21.07:0,21,294
chr10	19944395	.	G	GT	9560.79	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=19.062;DP=693;FS=0.293;HRun=0;HaplotypeScore=135.4467;InbreedingCoeff=0.9855;MQ=84.64;MQ0=0;MQRankSum=-5.957;QD=21.73;ReadPosRankSum=7.321;VQSLOD=5.8790;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,141,1934	0/0:10,0:10:30.10:0,30,420	0/0:20,0:20:57.16:0,57,719	0/0:29,0:29:63.19:0,63,924	0/0:19,0:19:57.18:0,57,781	1/1:2,21:23:49.88:540,50,0	1/1:7,22:29:45.60:599,46,0	0/0:27,0:27:75.25:0,75,1047	1/1:22,0:22:53.30:257,53,0	1/1:6,22:28:46.25:676,46,0	1/1:4,26:30:54.38:664,54,0	1/1:6,22:28:67.55:711,68,0	1/1:2,19:21:46.72:491,47,0	1/1:7,19:26:39.60:522,40,0	0/0:31,0:31:93.31:0,93,1299	1/1:4,22:26:70.42:661,70,0	1/1:3,29:32:90.09:853,90,0	1/1:3,19:22:61.60:572,62,0	1/1:4,6:10:6.43:145,6,0	1/1:10,24:34:68.51:660,69,0	1/1:6,28:34:57.24:636,57,0	1/1:3,23:26:64.73:570,65,0	1/1:8,18:26:46.34:458,46,0	1/1:3,20:23:56.46:547,56,0	0/0:24,0:24:72.20:0,72,984	0/0:18,0:18:54.17:0,54,739	0/0:20,0:20:57.17:0,57,765	0/0:7,0:7:21.07:0,21,294
chr10	19946557	.	GCT	G	832.89	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=1.636;DP=622;FS=7.136;HRun=0;HaplotypeScore=107.8729;InbreedingCoeff=0.9581;MQ=81.71;MQ0=0;MQRankSum=-2.258;QD=30.85;ReadPosRankSum=3.356;VQSLOD=5.7443;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,117,2082	0/0:8,0:8:24.08:0,24,449	0/0:14,0:13:36.11:0,36,575	0/0:21,0:21:22.15:0,22,272	0/0:16,0:16:48.15:0,48,867	0/0:21,0:21:63.22:0,63,1165	0/0:22,0:22:66.23:0,66,1230	0/0:26,0:26:66.22:0,66,1202	1/1:0,27:27:63.21:928,63,0	0/0:37,0:37:99:0,105,1938	0/0:21,0:21:63.22:0,63,1180	0/0:21,0:21:60.19:0,60,1092	0/0:28,0:28:84.27:0,84,1523	0/0:18,0:18:54.19:0,54,1011	0/0:26,0:26:78.27:0,78,1461	0/0:27,0:27:78.24:0,78,1385	0/0:22,0:22:66.23:0,66,1227	0/0:17,0:17:48.16:0,48,889	0/0:15,0:15:18.30:0,18,696	0/0:35,0:34:99:0,102,1871	0/0:14,0:14:42.12:0,42,753	0/0:31,0:31:90.31:0,90,1661	0/0:17,0:17:48.15:0,48,865	0/0:14,0:14:42.14:0,42,786	0/0:21,0:21:63.22:0,63,1171	0/0:24,0:24:72.23:0,72,1277	0/0:35,0:35:99:0,105,1926	0/0:4,0:4:12.01:0,12,161
chr10	19946759	.	T	TC	18019.40	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-16.033;DP=662;FS=1.718;HRun=1;HaplotypeScore=59.2489;InbreedingCoeff=0.9992;MQ=90.45;MQ0=0;MQRankSum=-4.520;QD=40.95;ReadPosRankSum=1.474;VQSLOD=5.4825;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:96.31:0,96,1246	0/0:14,0:14:42.12:0,42,530	0/0:29,0:29:87.27:0,87,1095	0/0:24,0:24:55.89:0,56,622	0/0:18,0:18:54.18:0,54,700	1/1:0,29:29:84.28:1259,84,0	1/1:2,19:21:51.17:765,51,0	1/1:0,35:35:99:1563,105,0	1/1:1,27:28:75.25:1123,75,0	1/1:0,35:35:99:1569,105,0	1/1:1,11:12:24.08:359,24,0	1/1:0,22:22:57.19:854,57,0	1/1:1,18:20:51.17:759,51,0	1/1:1,24:25:69.23:1018,69,0	0/0:25,0:25:75.24:0,75,973	1/1:0,31:31:84.28:1259,84,0	1/1:0,30:30:87.29:1304,87,0	1/1:0,19:19:57.19:854,57,0	1/1:1,14:15:39.13:581,39,0	1/1:0,21:21:60.20:899,60,0	1/1:0,29:29:78.26:1169,78,0	1/1:0,15:15:39.13:583,39,0	1/1:0,28:29:81.27:1201,81,0	1/1:0,24:24:60.20:899,60,0	0/0:20,0:20:60.19:0,60,776	0/0:23,1:24:24.24:0,24,812	0/0:27,0:27:81.26:0,81,1050	0/0:9,0:9:27.09:0,27,350
chr10	19948458	.	TCTGATA	T	1737.37	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=8.553;DP=641;FS=0.687;HRun=0;HaplotypeScore=127.7668;InbreedingCoeff=0.9836;MQ=79.61;MQ0=0;MQRankSum=-6.927;QD=48.26;ReadPosRankSum=-4.394;VQSLOD=2.5345;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:72.25:0,72,2537	0/0:10,0:10:30.08:0,30,926	0/0:24,0:24:66.14:0,66,2260	0/0:8,0:8:18.06:0,18,576	0/0:38,0:38:99:0,111,3578	0/0:32,0:32:84.29:0,84,2994	0/0:17,0:17:48.16:0,48,1688	1/1:5,31:36:93.14:1832,93,0	0/0:26,0:26:78.27:0,78,2766	0/0:29,0:29:87.29:0,87,2909	0/0:24,0:24:63.22:0,63,2244	0/0:28,0:28:81.28:0,81,2806	0/0:26,0:26:78.25:0,78,2600	0/0:14,0:14:42.14:0,42,1447	0/0:24,0:24:72.25:0,72,2507	0/0:20,0:20:57.17:0,57,1860	0/0:16,0:16:48.16:0,48,1689	0/0:19,0:19:57.20:0,57,2031	0/0:26,0:26:72.25:0,72,2394	0/0:29,0:29:87.30:0,87,3078	0/0:8,0:8:21.07:0,21,749	0/0:30,0:30:90.31:0,90,3140	0/0:23,0:23:69.22:0,69,2244	0/0:7,0:7:21.07:0,21,735	0/0:27,0:27:78.27:0,78,2690	0/0:23,0:23:69.24:0,69,2309	0/0:35,0:35:99:0,102,3540	0/0:17,0:17:42.14:0,42,1495
chr10	19948977	.	G	GA	8419.26	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-14.246;DP=641;FS=7.142;HRun=8;HaplotypeScore=58.0112;InbreedingCoeff=0.9905;MQ=82.51;MQ0=0;MQRankSum=-2.516;QD=27.69;ReadPosRankSum=1.303;VQSLOD=5.4187;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:49,1:50:94.42:0,94,1113	0/0:8,0:8:20.99:0,21,186	0/0:20,0:19:35.98:0,36,321	0/0:19,0:18:29.37:0,29,254	0/0:24,0:24:63.03:0,63,576	0/0:14,0:14:36.02:0,36,329	0/0:31,0:31:49.46:0,49,627	0/0:33,0:33:81.02:0,81,738	0/0:18,0:18:51.02:0,51,467	1/1:4,24:28:72.20:819,72,0	1/1:1,11:12:30.05:331,30,0	1/1:4,24:29:69.07:776,69,0	1/1:3,20:24:60.01:669,60,0	1/1:3,16:19:42.12:484,42,0	0/0:40,0:40:99:0,105,952	1/1:7,22:29:28.58:709,29,0	1/1:4,33:37:93.75:1075,94,0	1/1:2,23:25:60.18:693,60,0	1/1:2,18:20:54.14:605,54,0	1/1:1,12:13:36.11:415,36,0	1/1:3,17:20:48.14:554,48,0	1/1:1,19:20:51.15:589,51,0	1/1:1,12:13:8.64:353,9,0	1/1:4,11:15:30.09:346,30,0	0/0:21,0:21:54.02:0,54,494	0/0:25,0:25:63.03:0,63,576	0/0:21,0:21:60.03:0,60,549	0/0:13,0:13:39.02:0,39,357
chr10	19949721	.	GCAGGCAGACAGACAGACAGACAGA	G	10351.54	PASS	AB=0.559;AC=30;AF=0.536;AN=56;BaseQRankSum=10.012;DP=735;FS=4.300;HRun=0;HaplotypeScore=300.6452;InbreedingCoeff=0.7715;MQ=55.55;MQ0=14;MQRankSum=-5.881;QD=25.81;ReadPosRankSum=3.285;VQSLOD=3.1420;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:67,0:67:78.63:0,79,3426	0/0:9,0:9:15.04:0,15,842	0/0:19,0:9:17.97:0,18,164	0/0:10,0:5:6.77:0,7,144	0/0:19,0:19:42.13:0,42,1770	1/1:2,12:14:6.02:392,6,0	1/1:17,0:17:29.89:346,30,0	0/0:36,0:25:69.16:0,69,1688	0/0:33,0:33:63.58:0,64,3443	1/1:5,17:21:47.75:1027,48,0	1/1:3,16:19:18.02:736,18,0	1/1:2,30:32:12.04:783,12,0	1/1:1,31:32:8.99:587,9,0	1/1:6,28:34:27.09:1765,27,0	0/0:35,0:35:99:0,102,6216	1/1:2,25:27:12.04:784,12,0	1/1:1,26:27:18.06:1065,18,0	0/1:1,14:15:39.64:190,0,40	1/1:5,17:18:44.72:794,45,0	1/1:2,16:18:21.07:574,21,0	1/1:25,0:23:7.55:68,8,0	1/1:4,20:24:6.02:392,6,0	0/1:9,18:27:94.32:397,0,94	1/1:4,42:46:8.76:452,9,0	0/0:17,0:17:27.53:0,28,1765	0/0:42,0:42:75.22:0,75,4692	0/0:37,0:34:63.06:0,63,3553	0/0:10,0:8:14.72:0,15,808
chr10	19949725	.	GCAGA	G	3473.53	PASS	AB=1.000;AC=42;AF=0.750;AN=56;BaseQRankSum=3.809;DP=665;FS=12.319;HRun=0;HaplotypeScore=146.1955;InbreedingCoeff=0.4293;MQ=55.01;MQ0=15;MQRankSum=-1.304;QD=6.27;ReadPosRankSum=2.897;VQSLOD=1.8970;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:17,39:56:27.04:399,27,0	1/1:3,6:9:6.02:95,6,0	0/0:13,0:6:3:0,3,26	0/0:9,0:4:3.01:0,3,30	1/1:7,9:16:23.67:202,24,0	1/1:12,0:12:6.01:56,6,0	0/0:17,0:17:3:0,3,26	1/1:33,0:22:12.02:122,12,0	0/0:15,0:35:24.07:0,24,391	0/1:18,0:17:44.63:45,0,62	1/1:16,0:16:9.01:84,9,0	1/1:30,0:30:12.01:112,12,0	1/1:31,0:31:8.76:83,9,0	1/1:29,0:29:27.03:251,27,0	0/0:36,0:36:14.62:0,15,997	1/1:25,0:25:12.01:111,12,0	1/1:26,0:26:15.01:136,15,0	1/1:15,0:15:3:28,3,0	0/1:20,0:16:14.27:21,0,14	1/1:16,0:16:6.01:55,6,0	0/1:24,0:22:0.01:0,0,1	1/1:20,0:20:6.01:56,6,0	0/1:20,0:20:9.47:47,0,9	1/1:43,0:43:8.64:66,9,0	1/1:8,7:15:6.02:95,6,0	1/1:15,21:36:63.15:894,63,0	1/1:14,18:33:23.88:331,24,0	1/1:1,9:8:10.43:186,10,0
chr10	19949914	.	G	GAA	1110.98	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-5.209;DP=711;FS=3.158;HRun=9;HaplotypeScore=89.7262;InbreedingCoeff=0.9516;MQ=63.04;MQ0=2;MQRankSum=0.939;QD=32.68;ReadPosRankSum=-5.129;VQSLOD=2.7030;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,114,1203	0/0:13,0:13:33.08:0,33,351	0/0:14,0:9:14.98:0,15,160	0/0:22,0:16:23.99:0,24,245	0/0:23,0:23:54.07:0,54,558	0/0:24,0:26:54.01:0,54,609	0/0:23,0:23:51.05:0,51,523	1/1:5,29:34:81.26:1206,81,0	0/0:21,0:21:42.07:0,42,447	0/0:30,0:31:50.95:0,51,598	0/0:18,0:19:32.98:0,33,399	0/0:33,0:33:81.18:0,81,858	0/0:27,0:27:63.08:0,63,645	0/0:27,0:27:75.17:0,75,790	0/0:42,0:42:99:0,108,1140	0/0:23,0:24:59.85:0,60,611	0/0:26,0:26:69.13:0,69,723	0/0:23,0:23:45.96:0,46,597	0/0:26,0:27:57.91:0,58,658	0/0:35,0:35:44.33:0,44,697	0/0:19,0:19:33.04:0,33,343	0/0:20,0:20:48.01:0,48,487	0/0:15,0:15:27.05:0,27,287	0/0:21,0:22:56.86:0,57,586	0/0:26,0:26:69.05:0,69,734	0/0:29,0:29:46.84:0,47,690	0/0:34,0:34:78.16:0,78,830	0/0:6,0:6:12.01:0,12,128
chr10	19950209	.	ACACG	A	400.96	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=-1.588;DP=713;FS=3.699;HRun=0;HaplotypeScore=202.4360;InbreedingCoeff=0.5014;MQ=68.26;MQ0=6;MQRankSum=-1.306;QD=11.79;ReadPosRankSum=0.113;VQSLOD=3.3191;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:2.86:0,3,320	0/0:11,0:11:11.93:0,12,88	0/0:34,0:20:49.29:0,49,397	0/0:39,0:27:45.64:0,46,399	0/1:19,0:19:26.57:27,0,157	0/0:23,0:23:52.78:0,53,345	0/0:23,0:21:52.85:0,53,390	0/0:38,0:37:74.51:0,75,779	1/1:11,4:15:33.06:480,33,0	0/0:22,0:21:41.47:0,41,357	0/0:22,0:22:23.41:0,23,266	0/0:33,0:32:70.63:0,71,459	0/0:21,0:21:23.99:0,24,322	0/0:23,0:23:47.77:0,48,311	0/0:27,0:27:68.83:0,69,1262	0/0:14,0:14:26.42:0,26,184	0/0:24,0:24:50.56:0,51,346	0/0:17,0:15:29.98:0,30,253	0/0:19,0:18:52.72:0,53,402	0/0:25,0:25:62.01:0,62,422	0/0:50,0:50:99:0,103,679	0/0:24,0:24:53.64:0,54,344	0/0:20,0:21:52.97:0,53,349	0/0:38,0:37:74.24:0,74,535	0/0:22,0:22:44.79:0,45,357	0/0:27,0:27:29.26:0,29,455	0/0:27,0:26:20.53:0,21,264	0/0:18,0:18:3.31:0,3,263
chr10	19950213	.	GCA	G	9558.41	PASS	AB=0.758;AC=47;AF=0.839;AN=56;BaseQRankSum=4.192;DP=698;FS=1.623;HRun=0;HaplotypeScore=144.4197;InbreedingCoeff=0.5183;MQ=62.62;MQ0=12;MQRankSum=0.185;QD=15.80;ReadPosRankSum=4.170;VQSLOD=5.0443;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,23:37:52.37:557,52,0	1/1:2,7:9:9.03:105,9,0	0/0:31,0:17:5.93:0,6,59	0/0:33,1:22:7.55:0,8,57	1/1:7,14:22:26.71:258,27,0	1/1:21,0:21:33.10:383,33,0	0/1:23,0:21:41.07:218,0,41	0/1:24,15:37:22.24:407,0,22	1/1:19,0:18:17.14:70,17,0	1/1:10,13:22:17.13:483,17,0	1/1:12,7:19:35.94:397,36,0	1/1:15,17:31:53.48:627,53,0	1/1:10,10:21:35.65:375,36,0	1/1:6,17:23:36.09:420,36,0	0/0:26,1:27:16.15:0,16,663	1/1:4,9:13:27.06:304,27,0	1/1:11,12:23:22.61:373,23,0	1/1:9,7:14:25.59:269,26,0	1/1:14,5:18:30.04:325,30,0	1/1:10,14:24:45.10:524,45,0	1/1:25,25:48:78.19:891,78,0	1/1:7,16:23:39.10:454,39,0	1/1:12,8:20:33.10:385,33,0	1/1:24,15:37:51.08:566,51,0	1/1:7,15:22:12.17:297,12,0	1/1:11,13:25:37.18:400,37,0	1/1:9,15:24:20.43:210,20,0	0/1:3,12:16:17.12:263,0,17
chr10	19950223	.	AC	A	200.51	PASS	AB=0.778;AC=2;AF=0.036;AN=56;BaseQRankSum=2.644;DP=759;FS=4.403;HRun=1;HaplotypeScore=178.7964;InbreedingCoeff=0.1132;MQ=50.47;MQ0=40;MQRankSum=-2.353;QD=3.58;ReadPosRankSum=-0.896;VQSLOD=-0.2573;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:42:28.99:0,29,185	0/0:11,0:11:10.67:0,11,76	0/0:23,0:9:24.07:0,24,296	0/0:25,0:13:39.12:0,39,508	0/0:21,0:20:16.21:0,16,68	0/1:19,9:26:6.27:181,0,6	0/1:21,7:23:99:108,0,111	0/0:40,0:34:85.07:0,85,771	0/0:20,0:19:38.57:0,39,327	0/0:28,0:22:34.07:0,34,229	0/0:21,0:18:16.10:0,16,73	0/0:36,0:34:31.08:0,31,153	0/0:25,0:25:17.78:0,18,197	0/0:29,0:26:16.62:0,17,77	0/0:29,0:28:73.77:0,74,1042	0/0:14,0:13:9.88:0,10,31	0/0:27,0:27:30.09:0,30,237	0/0:18,0:15:24.16:0,24,141	0/0:20,0:18:37.27:0,37,256	0/0:29,0:28:28.23:0,28,148	0/0:62,0:51:38.06:0,38,168	0/0:23,0:23:14.50:0,15,52	0/0:20,0:19:21.71:0,22,117	0/0:42,0:36:34.70:0,35,185	0/0:22,0:22:29.04:0,29,232	0/0:28,0:22:47.06:0,47,363	0/0:25,0:25:33.27:0,33,274	0/0:19,0:19:31.74:0,32,272
chr10	19950225	.	AC	A	184.62	PASS	AB=0.780;AC=2;AF=0.036;AN=56;BaseQRankSum=2.860;DP=755;FS=1.951;HRun=1;HaplotypeScore=176.5354;InbreedingCoeff=-0.0229;MQ=48.82;MQ0=46;MQRankSum=-1.252;QD=3.24;ReadPosRankSum=-1.354;VQSLOD=-0.5415;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:41:25.99:0,26,163	0/0:11,0:11:10.67:0,11,76	0/0:21,0:7:21.07:0,21,276	0/0:23,0:11:33.10:0,33,426	0/0:22,0:21:19.22:0,19,105	0/1:18,9:25:16.42:164,0,16	0/1:23,7:23:99:110,0,122	0/0:41,0:35:85.07:0,85,771	0/0:22,0:20:41.61:0,42,392	0/0:28,0:22:37.12:0,37,272	0/0:21,0:18:16.90:0,17,100	0/0:37,0:33:27.78:0,28,159	0/0:23,0:24:19.79:0,20,210	0/0:28,0:25:16.44:0,16,99	0/0:29,0:28:73.79:0,74,1054	0/0:14,0:13:9.91:0,10,31	0/0:27,0:27:30.09:0,30,254	0/0:19,0:15:24.29:0,24,174	0/0:20,0:18:37.46:0,37,316	0/0:29,0:28:28.34:0,28,216	0/0:63,0:51:38.14:0,38,217	0/0:23,0:22:14.48:0,14,48	0/0:20,0:19:21.75:0,22,144	0/0:42,0:36:32.76:0,33,247	0/0:20,0:20:23.02:0,23,159	0/0:29,0:22:47.06:0,47,374	0/0:21,0:21:21.26:0,21,151	0/0:20,0:19:31.74:0,32,272
chr10	19950266	.	G	GAC	5609.31	PASS	AB=0.767;AC=26;AF=0.500;AN=52;BaseQRankSum=11.142;DP=756;FS=14.993;HRun=0;HaplotypeScore=197.1410;InbreedingCoeff=0.5438;MQ=43.79;MQ0=65;MQRankSum=-5.317;QD=11.76;ReadPosRankSum=-2.037;VQSLOD=3.0983;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:51:94.95:0,95,1133	0/0:13,0:13:30.09:0,30,367	./.	./.	0/0:24,0:24:50.93:0,51,580	1/1:11,11:20:14.08:183,14,0	1/1:26,5:19:23.93:306,24,0	0/0:44,0:32:63:0,63,719	0/0:24,0:21:40.33:0,40,481	1/1:23,9:22:45.62:716,46,0	1/1:11,7:16:5.54:95,6,0	0/1:24,13:33:28.52:410,0,29	0/1:13,12:23:40.47:342,0,40	0/1:20,13:28:7.57:292,0,8	0/0:25,0:25:60.14:0,60,714	1/1:9,9:17:15.01:226,15,0	0/1:19,7:26:0.95:432,0,1	1/1:14,6:15:11.22:361,11,0	1/1:13,9:18:42.10:629,42,0	1/1:19,14:31:20.64:324,21,0	0/1:66,3:53:32.94:429,0,33	1/1:22,10:28:17.79:249,18,0	0/1:13,8:19:22.70:154,0,23	1/1:29,9:33:29.84:461,30,0	0/0:18,0:18:26.30:0,26,305	0/0:34,1:27:7.84:0,8,620	0/0:21,0:20:44.97:0,45,559	0/0:18,0:17:39.06:0,39,449
chr10	19950294	.	G	GAC	5431.50	PASS	AB=0.690;AC=24;AF=0.429;AN=56;BaseQRankSum=4.353;DP=750;FS=0.000;HRun=0;HaplotypeScore=152.4090;InbreedingCoeff=0.4533;MQ=50.32;MQ0=45;MQRankSum=-3.112;QD=12.21;ReadPosRankSum=1.672;VQSLOD=4.5171;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:45:87.07:0,87,1059	0/0:10,0:10:24.07:0,24,290	0/0:17,0:7:8.72:0,9,50	0/0:17,0:10:4.93:0,5,146	0/0:31,0:31:78.07:0,78,936	0/1:18,6:22:47.41:293,0,47	0/1:23,6:19:7.35:393,0,7	0/0:43,0:32:66.20:0,66,806	0/0:24,0:22:48.15:0,48,599	1/1:16,15:28:50.36:688,50,0	0/1:6,16:21:25.76:137,0,26	1/1:13,19:29:17.60:296,18,0	0/1:10,10:19:0.08:396,0,0	0/1:20,8:24:4.44:441,0,4	0/0:23,0:23:48.13:0,48,574	1/1:5,14:18:15.01:247,15,0	0/1:8,18:27:40.22:367,0,40	0/1:8,9:15:27.06:260,0,27	1/1:11,15:24:49.89:634,50,0	1/1:12,20:30:14.87:235,15,0	0/1:23,32:45:10.50:370,0,11	1/1:12,15:24:14.79:247,15,0	1/1:4,13:17:11.46:198,11,0	1/1:12,21:30:14.78:231,15,0	0/0:16,0:16:33.07:0,33,371	0/0:36,0:35:43.93:0,44,972	0/0:23,0:22:56.32:0,56,677	0/0:18,0:17:39.12:0,39,477
chr10	19951536	.	TGACA	T	13175.48	PASS	AB=0.561;AC=31;AF=0.554;AN=56;BaseQRankSum=16.333;DP=711;FS=3.580;HRun=0;HaplotypeScore=130.6715;InbreedingCoeff=0.9443;MQ=71.80;MQ0=1;MQRankSum=-2.579;QD=36.60;ReadPosRankSum=5.285;VQSLOD=4.6857;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:39:87.30:0,87,2159	0/0:20,0:20:51.18:0,51,1251	0/0:34,0:32:81.42:0,81,1879	0/0:28,0:27:56.93:0,57,1199	0/0:46,0:45:99:0,126,3184	1/1:7,21:28:54.18:946,54,0	1/1:1,18:19:36.12:631,36,0	0/0:45,0:45:99:0,105,2559	0/0:20,0:20:48.16:0,48,1225	1/1:4,19:23:54.16:881,54,0	1/1:2,28:30:69.24:1209,69,0	1/1:9,17:26:45.15:789,45,0	1/1:4,20:24:51.17:894,51,0	1/1:2,15:17:42.14:736,42,0	0/0:20,0:20:51.18:0,51,1269	1/1:2,20:22:51.17:894,51,0	0/1:5,18:23:5.03:790,0,5	1/1:4,21:25:57.20:999,57,0	1/1:5,15:19:45.12:726,45,0	1/1:4,25:29:72.25:1262,72,0	1/1:3,18:21:39.13:684,39,0	1/1:2,21:23:45.15:789,45,0	1/1:3,16:19:33.11:578,33,0	1/1:3,8:11:21.07:368,21,0	0/0:20,0:20:51.15:0,51,1247	0/0:30,0:30:75.26:0,75,1838	0/0:29,0:29:81.28:0,81,2067	0/0:20,0:20:51.17:0,51,1265
chr10	19951683	.	GCT	G	685.91	PASS	AB=1.000;AC=31;AF=0.574;AN=54;BaseQRankSum=-0.576;DP=499;FS=8.172;HRun=0;HaplotypeScore=103.8646;InbreedingCoeff=0.1508;MQ=68.91;MQ0=21;MQRankSum=2.223;QD=2.14;ReadPosRankSum=4.367;VQSLOD=1.0282;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:23,3:26:17.58:164,18,0	./.	0/0:22,0:11:6.01:0,6,70	0/0:49,0:25:5.70:0,6,38	1/1:12,1:13:3.01:34,3,0	0/1:15,0:15:29.84:37,0,30	0/1:19,0:19:9.86:10,0,28	0/0:35,0:35:10.24:0,10,44	0/0:18,0:17:9.84:0,10,62	0/1:14,0:14:10.11:10,0,31	0/0:5,0:5:2.74:0,3,12	0/1:16,0:15:23.87:24,0,36	0/1:19,0:19:7.98:37,0,8	0/1:16,0:16:13.15:31,0,13	0/0:12,1:13:15.05:0,15,227	0/0:19,0:19:0.12:0,0,42	0/1:22,0:22:43.02:43,0,90	0/0:8,0:7:7.76:0,8,47	1/1:17,0:14:5.48:24,5,0	1/1:19,0:17:2.74:12,3,0	1/1:14,0:14:2.74:12,3,0	1/1:13,0:12:2.74:13,3,0	1/1:9,0:9:2.04:6,2,0	1/1:12,0:12:0.47:1,0,0	1/1:16,1:17:3.01:34,3,0	1/1:24,1:24:4.77:40,5,0	1/1:18,5:23:3.66:236,4,0	1/1:10,1:10:8.94:74,9,0
chr10	19951706	.	CTCT	C	584.88	PASS	AB=0.934;AC=19;AF=0.339;AN=56;BaseQRankSum=3.308;DP=528;FS=3.402;HRun=0;HaplotypeScore=119.5674;InbreedingCoeff=0.0679;MQ=45.91;MQ0=34;MQRankSum=4.914;QD=2.41;ReadPosRankSum=1.601;VQSLOD=1.6520;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:25:16.65:0,17,210	0/0:9,0:8:6.02:0,6,85	0/0:24,0:5:15.03:0,15,223	0/0:37,0:13:9.02:0,9,250	0/0:16,0:16:5.81:0,6,51	0/1:14,3:15:5.87:104,0,6	0/1:14,1:14:20.19:34,0,20	0/0:43,0:42:59.43:0,59,1150	0/0:23,0:22:9.15:0,9,229	0/1:17,3:19:27.17:27,0,299	0/0:10,0:8:1.53:0,2,4	0/1:15,0:13:5.19:65,0,5	0/1:15,1:14:52.79:70,0,53	1/1:11,1:11:16.40:123,16,0	0/0:16,0:15:21:0,21,430	0/1:23,1:22:35.28:54,0,35	0/1:20,3:21:79.82:80,0,158	0/1:9,0:8:1.99:2,0,166	0/1:16,1:12:37.92:38,0,165	0/1:23,1:22:4.06:56,0,4	1/1:11,2:12:2.24:29,2,0	1/1:16,1:13:0.89:29,1,0	1/1:7,1:7:3:27,3,0	0/1:12,1:12:4.62:5,0,9	0/0:17,0:17:23.44:0,23,275	0/0:29,0:26:64.73:0,65,854	0/0:20,0:19:11.90:0,12,194	0/0:12,0:11:17.72:0,18,144
chr10	19951736	.	CTGTGTGTGTGTGTGTG	C	5350.15	PASS	AB=0.643;AC=34;AF=0.708;AN=48;BaseQRankSum=3.097;DP=435;FS=4.229;HRun=0;HaplotypeScore=135.5681;InbreedingCoeff=0.2271;MQ=36.83;MQ0=26;MQRankSum=0.319;QD=16.82;ReadPosRankSum=2.171;VQSLOD=3.7348;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:4,12:15:0.69:1,1,0	1/1:1,6:6:9.03:418,9,0	0/0:21,0:1:2.84:0,3,14	0/0:26,0:3:6.02:0,6,132	./.	1/1:7,5:12:2.03:4,2,0	./.	0/1:34,0:29:24.62:68,0,25	0/1:9,12:23:1.51:370,0,2	1/1:28,0:27:19.67:767,20,0	0/1:4,9:11:0:0,0,0	0/1:3,9:9:0:0,0,0	1/1:3,7:9:5.23:117,5,0	1/1:2,11:12:3.01:137,3,0	0/1:4,6:9:0:0,0,0	1/1:2,18:20:12.04:505,12,0	0/1:8,5:15:61.19:729,0,61	1/1:2,0:5:0.07:449,0,0	1/1:6,9:11:5.85:784,6,0	1/1:18,1:22:2.90:19,3,0	./.	./.	0/1:1,6:8:0:0,0,0	0/0:5,0:8:0:0,0,0	0/1:1,4:5:0:0,0,0	1/1:6,12:16:6.69:730,7,0	1/1:5,11:15:3.24:24,3,0	1/1:2,4:6:6.02:227,6,0
chr10	19951738	.	GTGTGTGTGTGTGTGTCTCTCTCTCTCTC	G	4367.68	PASS	AB=1.000;AC=26;AF=0.684;AN=38;BaseQRankSum=2.292;DP=381;FS=10.217;HRun=0;HaplotypeScore=155.2107;InbreedingCoeff=0.2394;MQ=38.12;MQ0=27;MQRankSum=3.910;QD=19.41;ReadPosRankSum=-0.032;VQSLOD=3.1270;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:0.47:0,0,1	1/1:7,0:6:9.03:395,9,0	./.	0/0:29,0:3:5.91:0,6,53	./.	./.	./.	1/1:30,0:24:12.80:293,13,0	1/1:22,0:21:0.02:279,0,0	1/1:24,0:22:29.66:767,30,0	0/1:10,0:8:0:0,0,0	./.	1/1:8,0:6:3.01:90,3,0	1/1:12,0:11:2.74:12,3,0	./.	1/1:21,0:19:12.04:405,12,0	0/1:16,0:14:76.11:463,0,76	0/1:5,0:5:30.88:160,0,31	1/1:14,0:9:5.06:459,5,0	1/1:21,0:21:2.77:17,3,0	./.	./.	0/0:7,0:7:0.47:0,0,1	0/0:6,0:6:0.47:0,0,1	./.	1/1:16,0:14:25.49:764,25,0	0/1:14,0:13:0:0,0,0	1/1:5,0:5:6.02:264,6,0
chr10	19951740	.	GTGTGTGTGTGTGTCTCTCTCTCTCTC	G	5521.44	PASS	AB=1.000;AC=27;AF=0.711;AN=38;BaseQRankSum=1.294;DP=380;FS=10.315;HRun=0;HaplotypeScore=145.6317;InbreedingCoeff=0.3753;MQ=38.35;MQ0=26;MQRankSum=3.246;QD=24.65;ReadPosRankSum=1.094;VQSLOD=3.3857;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:0.47:0,0,1	1/1:7,0:6:9.03:304,9,0	./.	0/0:30,0:3:5.98:0,6,57	./.	./.	./.	1/1:16,16:26:62.19:775,62,0	1/1:22,0:21:8.33:222,8,0	1/1:2,21:21:50.46:1178,50,0	0/1:10,0:8:0:0,0,0	./.	1/1:8,0:6:3.01:107,3,0	1/1:12,0:11:3.01:34,3,0	./.	1/1:21,0:19:12.04:479,12,0	0/1:16,0:14:59.79:631,0,60	1/1:5,0:5:14.79:285,15,0	1/1:13,0:9:23.87:669,24,0	1/1:4,17:21:2.95:36,3,0	./.	./.	0/0:7,0:7:0.47:0,0,1	0/0:6,0:6:0.47:0,0,1	./.	1/1:16,0:14:10.40:576,10,0	0/1:13,0:12:0.08:0,0,0	1/1:5,0:5:6.02:225,6,0
chr10	19952314	.	A	AC	629.82	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-4.670;DP=673;FS=0.856;HRun=7;HaplotypeScore=66.8793;InbreedingCoeff=0.9966;MQ=74.02;MQ0=0;MQRankSum=0.105;QD=29.99;ReadPosRankSum=2.386;VQSLOD=4.1650;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,111,1072	0/0:11,0:11:30.05:0,30,289	0/0:17,0:17:39.86:0,40,358	0/0:16,0:17:31.30:0,31,270	0/0:21,0:21:53.82:0,54,504	0/0:27,0:27:72.10:0,72,690	0/0:31,0:31:81.12:0,81,782	0/0:30,0:30:84.13:0,84,811	1/1:1,20:21:60.18:725,60,0	0/0:25,0:25:60.09:0,60,579	0/0:9,0:9:24.02:0,24,225	0/0:24,0:24:63.09:0,63,608	0/0:19,0:19:45.06:0,45,434	0/0:32,0:32:81.10:0,81,775	0/0:28,0:28:81.13:0,81,782	0/0:23,0:23:45.04:0,45,428	0/0:38,0:38:99:0,99,956	0/0:32,0:32:90.14:0,90,869	0/0:25,0:25:54.07:0,54,517	0/0:16,0:16:36.05:0,36,347	0/0:39,0:39:99:0,102,985	0/0:19,0:19:54.07:0,54,516	0/0:16,0:16:39.06:0,39,376	0/0:21,0:21:57.09:0,57,550	0/0:20,0:20:39.05:0,39,376	0/0:33,0:33:93.13:0,93,890	0/0:20,0:20:54.08:0,54,521	0/0:13,0:13:39.06:0,39,376
chr10	19955213	.	G	GCTGGTGT	24230.73	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-10.184;DP=522;FS=29.342;HRun=0;HaplotypeScore=115.1608;InbreedingCoeff=0.9005;MQ=73.39;MQ0=0;MQRankSum=-13.552;QD=60.28;ReadPosRankSum=3.537;VQSLOD=3.2179;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:12,10:32:33.11:1269,33,0	1/1:3,2:7:9.03:360,9,0	0/0:29,0:27:78.25:0,78,1810	0/0:28,0:27:71.42:0,71,1690	1/1:6,3:12:12.04:485,12,0	0/0:20,0:20:29.98:0,30,622	0/0:23,0:23:66.23:0,66,1693	1/1:7,11:28:75.24:2342,75,0	1/1:9,19:31:69.24:2734,69,0	1/1:10,7:21:45:1556,45,0	1/1:6,3:11:12.04:488,12,0	1/1:9,11:24:42.14:1674,42,0	1/1:3,8:17:26.96:1089,27,0	1/1:5,8:16:27.09:1094,27,0	0/0:20,0:19:57.15:0,57,1332	1/1:1,13:21:42.14:1628,42,0	1/1:5,16:25:36.08:1322,36,0	1/1:2,9:15:27.09:1103,27,0	1/1:7,4:15:20.73:594,21,0	1/1:7,1:10:6.02:245,6,0	1/1:12,3:20:12.04:489,12,0	1/1:4,5:12:15.05:610,15,0	1/1:4,2:11:9.03:361,9,0	1/1:2,8:15:19.91:854,20,0	1/1:3,5:12:18.06:665,18,0	1/1:14,7:23:30.10:1080,30,0	1/1:1,12:16:48.16:1944,48,0	1/1:0,2:4:6.02:245,6,0
chr10	19956795	.	C	CATAAATAAATAAATAA	1679.99	PASS	AC=18;AF=0.500;AN=36;BaseQRankSum=2.310;DP=267;FS=0.000;HRun=0;HaplotypeScore=113.2019;InbreedingCoeff=0.6592;MQ=79.46;MQ0=0;MQRankSum=-2.097;QD=19.31;ReadPosRankSum=-1.974;VQSLOD=2.0686;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:21.07:0,21,817	0/0:4,0:4:5.60:0,6,260	./.	./.	./.	0/0:9,0:13:12.02:0,12,121	1/1:3,0:3:7.53:51,8,0	0/0:37,0:37:18.03:0,18,242	0/0:12,0:12:9.03:0,9,369	1/1:12,0:12:3:29,3,0	./.	./.	./.	1/1:8,0:8:6.02:319,6,0	0/0:6,0:6:3.01:0,3,130	1/1:9,0:9:12.04:548,12,0	1/1:13,1:18:6.02:212,6,0	1/1:15,0:15:12.04:384,12,0	1/1:9,0:9:3:27,3,0	./.	1/1:10,0:10:3.01:52,3,0	./.	1/1:3,0:3:3.01:202,3,0	./.	./.	0/0:7,0:7:6.01:0,6,157	0/0:14,0:14:24.02:0,24,824	0/0:7,0:7:9.03:0,9,334
chr10	19957923	.	CTTTCCCAG	C	858.39	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.014;DP=545;FS=5.406;HRun=0;HaplotypeScore=127.7348;InbreedingCoeff=0.9597;MQ=56.09;MQ0=4;MQRankSum=-3.651;QD=35.77;ReadPosRankSum=-3.185;VQSLOD=2.2475;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:63.20:0,63,2469	0/0:12,0:12:30.10:0,30,1293	0/0:18,0:11:24.08:0,24,958	0/0:18,0:10:19.06:0,19,799	0/0:18,0:18:48.16:0,48,1981	0/0:21,0:21:60.21:0,60,2565	0/0:20,0:20:51.18:0,51,2199	1/1:7,17:24:42.13:953,42,0	0/0:28,0:28:81.28:0,81,3374	0/0:20,0:20:51.18:0,51,2189	0/0:17,0:17:42.14:0,42,1581	0/0:15,0:15:45.15:0,45,1862	0/0:31,0:31:81.28:0,81,3422	0/0:29,0:29:81.28:0,81,3323	0/0:20,0:20:51.18:0,51,2025	0/0:19,0:19:48.16:0,48,1986	0/0:22,0:22:63.22:0,63,2668	0/0:18,0:18:51.18:0,51,2070	0/0:16,0:12:24.08:0,24,1035	0/0:19,0:19:51.18:0,51,2135	0/0:12,0:12:33.11:0,33,1359	0/0:19,0:19:57.18:0,57,2109	0/0:23,0:23:60.21:0,60,2551	0/0:14,0:14:36.12:0,36,1552	0/0:19,0:19:54.19:0,54,2257	0/0:18,0:18:48.16:0,48,2021	0/0:26,0:26:75.26:0,75,3091	0/0:4,0:4:12.04:0,12,472
chr10	19958733	.	AAACAG	A	1310.02	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.295;DP=757;FS=6.729;HRun=0;HaplotypeScore=136.7005;InbreedingCoeff=0.9997;MQ=95.63;MQ0=0;MQRankSum=-3.968;QD=52.40;ReadPosRankSum=0.733;VQSLOD=3.6537;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,147,4585	0/0:11,0:11:33.10:0,33,951	0/0:41,0:41:99:0,107,3028	0/0:30,0:30:77.74:0,78,1907	0/0:34,0:34:93.30:0,93,2852	0/0:25,0:25:75.22:0,75,2142	0/0:33,0:33:99:0,99,2996	0/0:29,0:29:81.28:0,81,2514	1/1:0,25:25:66.23:1405,66,0	0/0:31,0:31:90.31:0,90,2834	0/0:32,0:32:93.32:0,93,2891	0/0:23,0:23:66.21:0,66,2013	0/0:31,0:31:92.94:0,93,2639	0/0:31,0:31:93.29:0,93,2677	0/0:20,0:20:60.18:0,60,1763	0/0:19,0:19:57.15:0,57,1617	0/0:26,0:26:75.26:0,75,2362	0/0:24,0:24:69.22:0,69,2117	0/0:15,0:15:45.15:0,45,1344	0/0:22,0:22:66.21:0,66,1976	0/0:45,0:45:99:0,132,4077	0/0:26,0:26:72.25:0,72,2281	0/0:17,0:17:51.18:0,51,1613	0/0:21,0:21:63.20:0,63,1926	0/0:27,0:27:81.28:0,81,2567	0/0:19,0:19:54.19:0,54,1679	0/0:29,0:29:84.26:0,84,2521	0/0:21,0:21:63.22:0,63,1986
chr10	19959243	.	G	GA	1246.36	PASS	AB=0.989;AC=13;AF=0.232;AN=56;BaseQRankSum=-10.063;DP=581;FS=3.450;HRun=9;HaplotypeScore=106.6163;InbreedingCoeff=0.1313;MQ=78.13;MQ0=0;MQRankSum=-1.468;QD=4.74;ReadPosRankSum=-4.801;VQSLOD=0.1979;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:38.99:0,39,319	0/0:6,0:6:13.35:0,13,57	0/0:15,0:15:20.76:0,21,181	0/0:11,0:12:10.16:0,10,74	0/1:27,0:27:28.02:28,0,149	1/1:1,24:27:58.79:667,59,0	1/1:0,18:19:44.95:477,45,0	0/1:27,0:27:86.52:130,0,87	0/0:18,0:18:37.74:0,38,120	0/0:20,0:20:43.70:0,44,146	0/0:21,0:21:34.96:0,35,160	0/0:19,0:19:41.79:0,42,150	0/0:15,0:15:22.97:0,23,85	0/1:23,0:23:2.68:3,0,113	0/0:19,0:19:26.22:0,26,165	0/0:11,0:11:22.89:0,23,88	0/0:16,0:16:41.98:0,42,171	0/0:16,0:16:33.43:0,33,130	0/1:18,0:18:6.76:7,0,71	0/1:20,0:20:5.29:5,0,106	0/1:14,0:14:0.41:0,0,60	0/1:25,1:26:52.86:53,0,136	0/0:23,0:23:1.60:0,2,134	0/0:22,0:22:9.27:0,9,143	0/1:34,1:35:16.53:17,0,173	0/1:26,1:27:13.32:13,0,112	0/0:25,0:25:27.17:0,27,165	0/0:14,0:14:29.45:0,29,125
chr10	19960349	.	A	AT	4280.62	PASS	AC=14;AF=0.269;AN=52;BaseQRankSum=-10.947;DP=586;FS=2.670;HRun=9;HaplotypeScore=48.2382;InbreedingCoeff=0.9914;MQ=57.31;MQ0=16;MQRankSum=0.701;QD=23.91;ReadPosRankSum=1.500;VQSLOD=5.6796;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,33:34:61.17:889,61,0	1/1:2,11:13:30.08:332,30,0	./.	./.	1/1:5,20:25:60.16:662,60,0	0/0:15,0:15:41.01:0,41,341	0/0:12,0:12:26.98:0,27,234	0/0:35,0:34:80.95:0,81,700	0/0:17,0:17:35.98:0,36,312	0/0:17,0:17:47.99:0,48,417	0/0:19,1:20:20.80:0,21,407	0/0:19,0:19:50.99:0,51,443	0/0:18,0:18:47.96:0,48,411	0/0:16,0:16:41.98:0,42,364	0/0:26,0:26:71.99:0,72,625	0/0:19,0:19:47.99:0,48,417	0/0:24,0:24:59.97:0,60,521	0/0:24,0:23:50.95:0,51,436	0/0:22,0:21:50.92:0,51,433	0/0:23,0:23:65.98:0,66,573	0/0:15,0:15:29.98:0,30,260	0/0:26,0:26:74.98:0,75,650	0/0:12,0:12:35.99:0,36,312	0/0:21,0:21:47.98:0,48,417	1/1:2,17:19:19.07:439,19,0	1/1:3,29:33:90.08:976,90,0	1/1:2,26:28:14.13:610,14,0	1/1:6,18:24:15.88:374,16,0
chr10	19960796	.	T	TG	2210.59	PASS	AB=0.685;AC=8;AF=0.143;AN=56;BaseQRankSum=7.281;DP=635;FS=7.568;HRun=0;HaplotypeScore=130.5748;InbreedingCoeff=0.1714;MQ=57.90;MQ0=8;MQRankSum=3.354;QD=12.21;ReadPosRankSum=5.889;VQSLOD=4.4229;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:30,24:53:71.64:706,0,72	1/1:7,5:12:11.72:197,12,0	0/0:17,0:11:31.56:0,32,361	0/0:17,0:11:24.49:0,24,314	0/1:20,12:31:42.92:375,0,43	0/0:27,0:27:81.25:0,81,1101	0/0:25,0:22:62.96:0,63,809	0/0:30,0:30:90.28:0,90,1201	0/0:21,0:21:57.17:0,57,765	0/0:27,0:27:63.14:0,63,609	0/0:21,0:20:55.79:0,56,548	0/0:22,0:22:47.63:0,48,505	0/0:30,0:30:65.18:0,65,679	0/0:20,0:20:32.65:0,33,319	0/0:17,0:17:51.17:0,51,713	0/0:22,0:22:56.07:0,56,510	0/0:24,0:24:54.04:0,54,584	0/0:19,0:19:32.97:0,33,378	0/0:20,0:16:44.88:0,45,527	0/0:26,0:24:48.06:0,48,468	0/0:18,0:18:35.83:0,36,381	0/0:26,0:27:46.51:0,47,433	0/0:13,0:13:26.90:0,27,292	0/0:11,0:11:16.39:0,16,152	0/1:9,10:19:7.55:290,0,8	0/1:15,9:24:18.15:318,0,18	0/1:15,10:23:55.58:244,0,56	0/1:5,9:14:9.23:220,0,9
chr10	19960797	.	T	TTTG	7553.41	PASS	AB=0.672;AC=23;AF=0.411;AN=56;BaseQRankSum=16.485;DP=661;FS=0.000;HRun=0;HaplotypeScore=135.4239;InbreedingCoeff=-0.5659;MQ=56.99;MQ0=10;MQRankSum=-5.638;QD=14.44;ReadPosRankSum=8.259;VQSLOD=3.9872;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:29,24:52:99:1562,0,101	1/1:6,5:12:1.16:428,1,0	0/1:17,0:10:1.82:2,0,278	0/0:17,0:11:18.42:0,18,224	0/1:19,12:31:86.95:842,0,87	0/0:28,0:28:81.25:0,81,1172	0/0:25,0:22:57.17:0,57,800	0/0:30,0:30:81.25:0,81,1142	0/0:21,0:21:57.17:0,57,831	0/1:9,0:30:99:405,0,189	0/1:9,0:22:99:257,0,261	0/1:10,0:22:99:148,0,300	0/1:15,0:32:99:233,0,419	0/1:9,0:23:99:134,0,163	0/0:17,0:17:51.17:0,51,767	0/1:8,0:22:99:275,0,222	0/1:12,0:26:99:144,0,326	0/1:10,0:20:38.23:38,0,229	0/1:15,0:17:99:133,0,316	0/1:8,0:24:99:222,0,231	0/1:13,0:19:9.18:9,0,217	0/1:11,0:28:99:313,0,166	0/1:6,0:16:50.32:50,0,198	0/1:6,0:17:67.19:110,0,67	0/1:9,10:19:41.10:583,0,41	0/1:15,9:24:56.24:659,0,56	0/1:15,10:23:57.39:607,0,57	0/1:5,9:14:27.13:398,0,27
chr10	19960826	.	CT	C	510.13	PASS	AC=2;AF=0.037;AN=54;BaseQRankSum=-1.083;DP=590;FS=2.414;HRun=7;HaplotypeScore=130.3154;InbreedingCoeff=0.8393;MQ=50.04;MQ0=35;MQRankSum=-4.387;QD=15.46;ReadPosRankSum=-1.947;VQSLOD=2.3988;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:52:99:0,119,1473	0/0:13,0:13:30.10:0,30,377	./.	0/0:17,0:2:2.71:0,3,37	0/0:31,0:29:66.15:0,66,811	0/0:24,0:24:60.18:0,60,742	0/0:23,0:19:51.16:0,51,636	1/1:13,20:28:60.10:605,60,0	0/0:20,0:19:51.16:0,51,641	0/0:26,0:24:63.20:0,63,793	0/0:20,0:20:42.81:0,43,505	0/0:18,0:18:42.12:0,42,516	0/0:17,0:17:42.10:0,42,511	0/0:21,0:21:41.89:0,42,483	0/0:12,0:12:33.08:0,33,391	0/0:19,0:19:51.12:0,51,606	0/0:22,0:22:42.12:0,42,514	0/0:16,0:16:24.24:0,24,320	0/0:16,0:12:36.07:0,36,430	0/0:24,0:22:48.12:0,48,587	0/0:12,0:11:22.27:0,22,246	0/0:27,0:27:51.04:0,51,589	0/0:13,0:13:26.94:0,27,322	0/0:22,0:22:45.14:0,45,566	0/0:20,0:20:54.17:0,54,678	0/0:22,0:21:57.18:0,57,717	0/0:21,0:18:54.15:0,54,653	0/0:14,0:15:31.87:0,32,364
chr10	19966968	.	CAA	C	3654.51	PASS	AB=0.710;AC=36;AF=0.643;AN=56;BaseQRankSum=0.845;DP=447;FS=24.276;HRun=16;HaplotypeScore=62.4351;InbreedingCoeff=0.3806;MQ=74.98;MQ0=1;MQRankSum=-0.587;QD=11.01;ReadPosRankSum=6.694;VQSLOD=0.5056;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,16:23:23.72:242,24,0	1/1:0,13:14:20.92:217,21,0	0/0:17,0:11:13.80:0,14,113	0/0:8,1:8:0:0,0,0	1/1:8,11:22:2.30:192,2,0	0/0:7,1:16:1.32:0,1,211	0/1:4,0:12:6.93:7,0,124	0/0:18,0:30:59.46:0,59,621	0/0:5,0:9:4.74:0,5,17	1/1:4,11:16:14.59:163,15,0	1/1:8,11:18:25.56:265,26,0	0/1:9,7:16:2.93:130,0,3	0/1:7,7:15:49.77:108,0,50	0/1:8,8:17:77.14:140,0,77	0/0:27,1:28:50.03:0,50,808	0/1:8,8:16:1.17:133,0,1	0/0:6,0:6:0:0,0,0	0/1:6,10:19:27.13:174,0,27	1/1:2,8:10:23.94:201,24,0	1/1:4,9:16:32.32:249,32,0	1/1:8,2:10:5.84:50,6,0	1/1:10,12:26:16.32:239,16,0	1/1:9,15:24:47.36:400,47,0	1/1:4,6:11:5.23:122,5,0	1/1:6,5:11:13.95:123,14,0	1/1:4,15:19:35.67:301,36,0	1/1:4,1:6:8.64:62,9,0	1/1:4,5:10:17.57:137,18,0
chr10	19969065	.	CTGTG	C	2370.21	PASS	AB=0.684;AC=13;AF=0.241;AN=54;BaseQRankSum=-3.728;DP=519;FS=0.640;HRun=0;HaplotypeScore=106.2040;InbreedingCoeff=0.7574;MQ=59.76;MQ0=10;MQRankSum=3.020;QD=16.35;ReadPosRankSum=1.300;VQSLOD=3.4226;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:15,11:26:8.55:262,9,0	1/1:5,5:10:18.06:276,18,0	./.	0/0:26,0:13:3.01:0,3,59	1/1:15,13:29:39.12:567,39,0	0/0:20,0:22:5.30:0,5,102	0/0:26,0:25:3.01:0,3,52	0/0:20,0:20:31.43:0,31,475	0/0:7,0:8:9.03:0,9,159	0/0:14,0:14:12.04:0,12,217	0/0:10,0:11:9.03:0,9,147	0/0:12,0:14:24.08:0,24,438	0/0:17,0:18:30.57:0,31,532	0/0:10,0:10:15.05:0,15,300	0/0:19,0:19:19.87:0,20,495	0/0:14,0:14:20.08:0,20,291	0/0:23,0:23:21.07:0,21,366	0/0:11,0:10:9.03:0,9,162	0/0:17,0:20:18.03:0,18,291	0/0:15,0:16:18.05:0,18,322	0/0:18,0:17:18.04:0,18,323	0/0:16,0:19:39.13:0,39,680	0/0:17,0:18:26.97:0,27,457	0/0:16,0:15:5.93:0,6,81	0/1:14,11:26:6.73:201,0,7	1/1:10,15:25:42.11:622,42,0	1/1:8,12:20:22.32:337,22,0	1/1:3,6:9:18.06:285,18,0
chr10	19969101	.	G	GTGTGTGTG	1872.29	PASS	AB=0.893;AC=33;AF=0.589;AN=56;BaseQRankSum=-4.495;DP=462;FS=0.699;HRun=0;HaplotypeScore=146.7765;InbreedingCoeff=0.5143;MQ=59.58;MQ0=11;MQRankSum=-4.491;QD=7.09;ReadPosRankSum=-1.226;VQSLOD=2.5922;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:18.06:0,18,335	0/0:9,0:9:18.06:0,18,321	0/0:23,0:7:1.96:0,2,6	0/0:27,0:9:0.88:0,1,2	0/0:28,0:28:39.06:0,39,628	1/1:15,0:16:6.02:220,6,0	1/1:11,1:13:3.01:106,3,0	1/1:16,0:16:5.98:59,6,0	1/1:4,0:4:3.01:104,3,0	1/1:6,0:7:9:79,9,0	0/1:10,0:11:7.17:42,0,7	1/1:20,0:21:20.99:225,21,0	1/1:17,0:18:1.10:166,1,0	0/1:13,0:14:6.88:35,0,7	0/0:13,0:13:21.07:0,21,467	1/1:4,0:8:0.69:92,1,0	1/1:18,0:19:5.18:186,5,0	1/1:9,0:8:5.97:80,6,0	1/1:12,0:13:12.87:102,13,0	1/1:14,0:15:9.01:96,9,0	1/1:16,0:14:14.94:117,15,0	0/1:19,0:22:21.29:140,0,21	1/1:13,0:17:5.16:158,5,0	1/1:17,0:16:3.26:46,3,0	0/0:15,0:15:15.05:0,15,275	0/0:27,0:26:36.12:0,36,639	0/0:19,0:19:21.07:0,21,385	0/0:11,0:11:18.06:0,18,330
chr10	19969102	.	G	GT	2450.88	PASS	AB=1.000;AC=34;AF=0.607;AN=56;BaseQRankSum=-0.579;DP=470;FS=1.043;HRun=11;HaplotypeScore=88.9527;InbreedingCoeff=0.7301;MQ=60.58;MQ0=10;MQRankSum=-1.196;QD=8.36;ReadPosRankSum=-3.996;VQSLOD=1.9290;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,1:23:1.64:0,2,174	0/0:9,0:9:20.87:0,21,159	0/1:24,0:7:6.87:7,0,73	0/0:29,0:10:22.69:0,23,148	0/0:28,0:28:46.68:0,47,359	0/0:17,0:17:25.89:0,26,215	0/0:13,0:12:19.74:0,20,157	1/1:15,0:18:23.27:147,23,0	1/1:1,4:5:3.01:31,3,0	1/1:2,4:7:20.83:195,21,0	1/1:6,4:11:26.64:228,27,0	1/1:13,6:21:9.60:244,10,0	1/1:15,3:17:8.32:194,8,0	1/1:12,3:15:30.78:282,31,0	0/0:13,0:13:23.82:0,24,178	1/1:5,2:9:14.97:139,15,0	1/1:7,11:18:18.04:182,18,0	1/1:3,7:9:3.01:30,3,0	1/1:6,6:13:25.56:230,26,0	1/1:2,14:17:32.84:278,33,0	1/1:5,11:15:1.44:46,1,0	1/1:10,11:22:21.10:176,21,0	1/1:10,6:18:16.14:125,16,0	1/1:9,9:16:12.02:112,12,0	0/0:14,0:14:17.82:0,18,129	0/1:27,0:26:10.23:10,0,284	0/0:19,0:19:26.83:0,27,205	0/0:12,0:12:23.87:0,24,182
chr10	19972926	.	C	CT	2813.87	PASS	AB=0.947;AC=21;AF=0.375;AN=56;BaseQRankSum=-0.534;DP=374;FS=0.000;HRun=11;HaplotypeScore=67.2388;InbreedingCoeff=0.8497;MQ=74.01;MQ0=0;MQRankSum=-4.802;QD=15.81;ReadPosRankSum=-3.236;VQSLOD=3.1888;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,16:21:18.67:352,19,0	1/1:1,2:3:9.02:91,9,0	0/1:17,1:17:2.56:3,0,47	0/0:7,0:6:13.13:0,13,77	1/1:6,16:23:53.72:483,54,0	1/1:5,6:11:20.99:195,21,0	1/1:7,4:10:9.02:91,9,0	1/1:14,20:35:54.72:701,55,0	0/0:13,0:13:20.86:0,21,161	0/0:13,0:13:26.83:0,27,204	0/0:11,0:11:14.87:0,15,115	0/0:14,0:14:29.86:0,30,231	0/0:9,0:9:11.90:0,12,93	0/0:14,0:14:17.87:0,18,138	0/0:18,0:18:41.77:0,42,324	0/0:13,0:13:20.86:0,21,162	0/0:5,0:5:11.93:0,12,89	0/0:19,0:19:44.81:0,45,347	0/0:14,0:17:30:0,30,203	0/0:10,0:10:20.89:0,21,161	0/0:10,0:10:11.92:0,12,93	0/0:3,0:3:8.97:0,9,69	0/0:8,0:8:14.94:0,15,116	0/0:12,0:12:26.90:0,27,209	1/1:7,4:11:3.74:193,4,0	1/1:7,4:12:3.54:171,4,0	1/1:7,13:21:47.93:471,48,0	1/1:3,9:12:29.88:268,30,0
chr10	19972958	.	G	GT	2294.22	PASS	AB=0.876;AC=34;AF=0.607;AN=56;BaseQRankSum=-4.665;DP=293;FS=14.655;HRun=12;HaplotypeScore=69.7726;InbreedingCoeff=0.5553;MQ=61.84;MQ0=2;MQRankSum=2.424;QD=12.40;ReadPosRankSum=-0.697;VQSLOD=1.7221;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:13:12.18:0,12,36	0/0:0,0:2:4.07:0,4,12	0/1:10,0:9:2.16:2,0,71	0/1:6,0:4:3.95:4,0,16	0/0:3,0:17:10.83:0,11,47	1/1:3,0:5:8.67:52,9,0	1/1:5,0:8:12.67:62,13,0	0/0:8,0:27:33.57:0,34,106	0/1:5,1:6:17.28:17,0,54	0/1:5,4:11:1.24:117,0,1	1/1:5,9:15:16.90:261,17,0	1/1:4,8:12:30.04:289,30,0	1/1:5,3:9:14.86:131,15,0	1/1:2,6:8:21:195,21,0	0/0:17,1:20:22.61:0,23,311	1/1:7,5:12:21.42:186,21,0	0/1:4,2:6:4.50:86,0,4	1/1:5,6:11:18.03:175,18,0	1/1:10,5:14:32.96:296,33,0	1/1:8,4:12:24.32:203,24,0	1/1:1,4:5:9.01:88,9,0	1/1:0,5:5:11.97:107,12,0	1/1:3,5:8:6.01:58,6,0	1/1:1,7:8:15.02:146,15,0	0/0:1,0:10:4.65:0,5,29	0/0:1,0:12:22.40:0,22,65	0/1:3,0:13:10.11:10,0,29	0/0:1,0:6:10.74:0,11,33
chr10	19972995	.	A	ATTT	909.01	PASS	AB=0.944;AC=13;AF=0.241;AN=54;BaseQRankSum=2.789;DP=266;FS=9.377;HRun=5;HaplotypeScore=77.3074;InbreedingCoeff=-0.0975;MQ=66.14;MQ0=5;MQRankSum=-5.827;QD=9.67;ReadPosRankSum=2.643;VQSLOD=-0.7655;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:14.97:0,15,130	0/0:5,0:5:12.02:0,12,119	0/1:14,0:9:6.66:7,0,145	0/0:24,0:13:29.29:0,29,226	0/0:16,0:16:32.92:0,33,289	0/0:7,0:7:12.04:0,12,168	0/0:5,0:4:9.03:0,9,131	0/0:22,0:20:54.05:0,54,594	0/0:7,0:7:20.28:0,20,271	0/1:8,0:8:13.24:86,0,13	0/1:14,2:16:11.71:260,0,12	0/1:2,1:3:15.87:55,0,16	0/1:2,1:3:34.76:35,0,74	0/1:10,0:10:74.75:90,0,75	0/0:12,0:12:23.86:0,24,320	0/1:10,0:10:9.97:176,0,10	0/1:7,0:7:59.68:113,0,60	0/0:6,0:5:14.35:0,14,114	0/1:5,0:5:2.65:75,0,3	0/1:12,0:12:99:106,0,159	./.	0/0:2,0:2:3.01:0,3,43	0/1:4,0:4:31.45:31,0,55	1/1:1,0:1:2.99:24,3,0	0/0:13,0:13:32.45:0,32,310	0/0:19,0:19:53.88:0,54,523	0/0:12,0:12:33:0,33,285	0/0:9,0:9:24.04:0,24,231
chr10	19973001	.	A	AT	2909.39	PASS	AB=0.784;AC=37;AF=0.712;AN=52;BaseQRankSum=1.709;DP=264;FS=48.551;HRun=9;HaplotypeScore=57.7422;InbreedingCoeff=0.6346;MQ=68.77;MQ0=8;MQRankSum=-5.225;QD=15.31;ReadPosRankSum=3.697;VQSLOD=0.7184;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,5:6:15.04:166,15,0	1/1:1,3:4:12.03:132,12,0	0/0:18,0:11:14.84:0,15,119	0/0:24,0:12:11.71:0,12,83	1/1:3,11:14:15.18:315,15,0	0/0:7,0:7:11.99:0,12,103	0/0:5,0:3:6:0,6,52	0/1:13,11:22:6.81:372,0,7	0/0:7,0:7:17.79:0,18,143	1/1:2,0:7:17.19:91,17,0	1/1:7,0:15:29.48:163,29,0	1/1:2,0:3:5.68:28,6,0	1/1:3,0:3:2.84:14,3,0	1/1:6,0:10:20.13:116,20,0	0/0:10,0:10:17.98:0,18,156	1/1:3,0:10:22.17:114,22,0	1/1:4,0:8:14.29:75,14,0	0/1:7,0:5:0:0,0,0	0/1:3,0:5:5.40:32,0,5	1/1:6,0:11:17.21:105,17,0	./.	./.	1/1:1,0:3:5.68:29,6,0	1/1:1,0:2:2.84:14,3,0	1/1:3,10:13:27.07:298,27,0	1/1:7,14:21:42.11:464,42,0	1/1:4,8:12:29.91:312,30,0	1/1:2,8:10:1.36:240,1,0
chr10	19973714	.	CA	C	3704.78	PASS	AB=1.000;AC=48;AF=0.960;AN=50;BaseQRankSum=-1.789;DP=144;FS=0.000;HRun=1;HaplotypeScore=30.9773;InbreedingCoeff=-0.1048;MQ=95.45;MQ0=1;MQRankSum=-2.035;QD=25.73;ReadPosRankSum=0.384;VQSLOD=3.2757;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,9:9:24.08:311,24,0	1/1:0,1:1:3.01:39,3,0	0/1:10,0:7:51.06:69,0,51	0/1:28,0:18:9.39:238,0,9	1/1:0,6:6:15.05:193,15,0	1/1:0,4:4:6.02:78,6,0	1/1:0,7:7:18.06:232,18,0	1/1:0,12:12:35.96:394,36,0	1/1:0,6:6:18.06:233,18,0	1/1:0,2:2:6.02:77,6,0	1/1:0,1:1:3.01:39,3,0	1/1:0,5:6:8.96:96,9,0	1/1:0,1:1:3.01:39,3,0	1/1:0,2:2:6.02:77,6,0	1/1:0,5:5:15.05:194,15,0	1/1:2,0:2:5.84:34,6,0	1/1:0,8:8:15.05:193,15,0	1/1:0,4:4:6.02:78,6,0	./.	1/1:0,3:3:8.99:97,9,0	1/1:0,6:6:18.06:233,18,0	1/1:0,2:2:6.02:77,6,0	1/1:0,4:4:9.03:116,9,0	./.	1/1:0,4:4:12.04:156,12,0	1/1:0,8:8:24.06:296,24,0	1/1:0,3:3:9.03:117,9,0	./.
chr10	19973715	.	AG	A	3719.32	PASS	AB=0.749;AC=48;AF=0.960;AN=50;BaseQRankSum=-1.233;DP=155;FS=0.000;HRun=1;HaplotypeScore=31.8089;InbreedingCoeff=-0.1042;MQ=95.46;MQ0=1;MQRankSum=-3.135;QD=24.15;ReadPosRankSum=0.105;VQSLOD=3.2543;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,0:10:24.08:311,24,0	1/1:1,0:1:3.01:39,3,0	0/1:6,4:7:43.16:74,0,43	0/1:21,8:19:8.32:248,0,8	1/1:6,0:6:15.05:193,15,0	1/1:4,0:4:6.02:78,6,0	1/1:7,0:7:18.06:232,18,0	1/1:12,0:12:35.96:394,36,0	1/1:6,0:6:18.06:233,18,0	1/1:2,0:2:6.02:77,6,0	1/1:2,0:2:3.01:39,3,0	1/1:6,0:6:8.96:96,9,0	1/1:1,0:1:3.01:39,3,0	1/1:2,0:2:6.02:77,6,0	1/1:6,0:6:15.05:194,15,0	1/1:3,0:3:5.84:34,6,0	1/1:9,0:9:15.05:193,15,0	1/1:5,0:5:6.02:78,6,0	./.	1/1:4,0:4:8.99:97,9,0	1/1:7,0:7:18.06:233,18,0	1/1:2,0:2:6.02:77,6,0	1/1:4,0:4:9.03:116,9,0	./.	1/1:4,0:4:12.04:156,12,0	1/1:8,0:8:24.06:296,24,0	1/1:4,0:4:9.03:117,9,0	./.
chr10	19974601	.	GT	G	7301.51	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-3.731;DP=679;FS=16.421;HRun=11;HaplotypeScore=81.0198;InbreedingCoeff=0.9857;MQ=73.64;MQ0=0;MQRankSum=-2.389;QD=19.84;ReadPosRankSum=2.703;VQSLOD=4.3818;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:40:88.63:0,89,472	0/0:3,0:15:31.48:0,31,175	0/0:14,0:14:11.05:0,11,128	0/0:14,0:14:26.86:0,27,250	0/0:13,0:38:93.31:0,93,560	0/0:21,0:21:54.13:0,54,569	0/0:19,0:19:51.12:0,51,538	0/0:33,0:33:78.20:0,78,832	1/1:2,19:22:52.98:425,53,0	1/1:4,18:22:53.93:443,54,0	1/1:4,27:31:80.89:665,81,0	1/1:1,17:18:47.94:394,48,0	1/1:4,24:28:39.93:535,40,0	1/1:4,26:30:71.90:591,72,0	0/0:26,1:28:47.36:0,47,686	1/1:3,18:21:53.92:443,54,0	1/1:5,22:27:62.90:517,63,0	1/1:3,21:24:41.35:471,41,0	1/1:4,17:21:50.90:415,51,0	1/1:3,22:25:56.89:468,57,0	1/1:4,11:15:29.94:246,30,0	1/1:2,17:20:52.97:425,53,0	1/1:5,27:32:74.88:611,75,0	1/1:3,27:32:81.98:652,82,0	0/0:9,0:27:60.55:0,61,383	0/0:6,1:26:38.21:0,38,295	0/0:7,0:30:74.46:0,74,412	0/0:0,0:5:8.56:0,9,43
chr10	19975609	.	TCACA	T	2712.18	PASS	AB=0.836;AC=19;AF=0.396;AN=48;BaseQRankSum=1.873;DP=494;FS=5.374;HRun=0;HaplotypeScore=136.0240;InbreedingCoeff=0.4626;MQ=64.68;MQ0=9;MQRankSum=-1.091;QD=12.22;ReadPosRankSum=2.215;VQSLOD=3.1113;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:24,8:33:36.07:502,36,0	1/1:0,7:7:18.03:261,18,0	0/0:33,0:17:2.94:0,3,18	0/0:37,0:19:1.59:0,2,24	1/1:8,6:15:29.20:355,29,0	0/1:10,1:14:33.57:35,0,34	0/1:22,1:33:11.39:11,0,129	0/0:23,0:21:26.80:0,27,287	1/1:7,0:24:38.83:416,39,0	0/0:10,0:10:5.95:0,6,42	./.	./.	0/0:12,0:12:2.98:0,3,21	0/0:15,0:14:2.98:0,3,21	0/0:23,0:27:41.88:0,42,905	./.	0/0:12,0:12:0:0,0,0	0/0:12,0:11:11.85:0,12,79	0/0:17,0:17:0:0,0,0	0/0:15,0:15:5.95:0,6,42	0/1:22,0:21:0:0,0,0	./.	0/1:11,0:11:0:0,0,0	0/0:18,0:18:0:0,0,0	1/1:13,6:18:24.93:351,25,0	1/1:11,12:23:43.07:634,43,0	0/1:7,7:15:6.77:153,0,7	1/1:2,3:4:9.03:144,9,0
chr10	19975661	.	ACACG	A	2799.78	PASS	AB=0.873;AC=18;AF=0.643;AN=28;BaseQRankSum=3.972;DP=371;FS=2.718;HRun=0;HaplotypeScore=248.7866;InbreedingCoeff=0.2868;MQ=47.45;MQ0=12;MQRankSum=-4.765;QD=11.71;ReadPosRankSum=1.844;VQSLOD=2.8311;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:19,8:27:35.95:542,36,0	1/1:13,1:14:20:157,20,0	0/0:54,0:25:45.06:0,45,823	0/0:53,0:29:48.62:0,49,798	1/1:17,4:21:8.26:119,8,0	0/1:15,0:20:86.90:87,0,160	0/1:26,0:33:27.33:149,0,27	1/1:13,10:23:36.12:574,36,0	1/1:21,7:28:1.67:293,2,0	./.	./.	./.	./.	./.	0/0:21,0:21:57.14:0,57,1299	./.	./.	./.	./.	./.	./.	./.	./.	./.	0/1:22,4:25:27.22:233,0,27	1/1:19,7:26:7.20:483,7,0	0/1:14,0:14:68.42:70,0,68	1/1:6,1:7:17.82:219,18,0
chr10	19975673	.	G	GTA	999.61	PASS	AB=0.929;AC=10;AF=0.357;AN=28;BaseQRankSum=6.929;DP=344;FS=1.916;HRun=0;HaplotypeScore=262.5755;InbreedingCoeff=0.0985;MQ=48.95;MQ0=6;MQRankSum=-3.746;QD=6.62;ReadPosRankSum=2.124;VQSLOD=2.9893;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:31.56:0,32,246	0/1:9,0:10:33.45:42,0,33	0/0:44,0:25:69.19:0,69,1039	0/0:45,0:32:28.35:0,28,1092	0/0:22,1:22:7.86:0,8,83	1/1:11,8:19:26.89:495,27,0	1/1:24,9:33:23.10:353,23,0	0/0:27,0:27:59.35:0,59,647	0/1:23,1:25:2.71:3,0,133	./.	./.	./.	./.	./.	0/0:22,0:22:63.18:0,63,975	./.	./.	./.	./.	./.	./.	./.	./.	./.	0/1:24,1:24:10.77:11,0,76	0/1:18,2:20:27.59:28,0,298	0/1:11,2:13:25.14:116,0,25	0/1:6,0:6:52.55:73,0,53
chr10	19975675	.	ACG	A	1013.35	PASS	AB=0.885;AC=12;AF=0.429;AN=28;BaseQRankSum=4.995;DP=332;FS=1.098;HRun=0;HaplotypeScore=258.3316;InbreedingCoeff=-0.0951;MQ=49.03;MQ0=4;MQRankSum=-5.047;QD=4.67;ReadPosRankSum=3.844;VQSLOD=2.6294;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:21,9:30:24.02:33,0,24	0/0:9,0:9:10.69:0,11,73	0/0:41,0:24:72.06:0,72,1108	0/0:43,0:32:77.52:0,78,1195	0/1:17,6:22:12.17:12,0,18	1/1:14,5:19:43.26:298,43,0	1/1:18,15:33:26.22:403,26,0	0/1:23,3:26:99:143,0,237	0/1:22,3:25:35:83,0,35	./.	./.	./.	./.	./.	0/0:22,0:22:66.18:0,66,1184	./.	./.	./.	./.	./.	./.	./.	./.	./.	0/1:23,2:24:43.99:44,0,54	0/1:18,0:18:76.89:77,0,119	0/1:9,3:12:21.25:21,0,38	0/1:6,0:6:1.33:19,0,1
chr10	19975677	.	G	GTA	3067.33	PASS	AB=0.848;AC=19;AF=0.679;AN=28;BaseQRankSum=7.606;DP=335;FS=3.964;HRun=0;HaplotypeScore=255.9288;InbreedingCoeff=0.4053;MQ=49.00;MQ0=3;MQRankSum=-4.276;QD=13.22;ReadPosRankSum=4.491;VQSLOD=3.1065;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:27,4:31:34.67:355,35,0	1/1:3,6:10:18.23:319,18,0	0/0:37,0:23:69.09:0,69,949	0/0:43,0:32:73.71:0,74,998	1/1:14,9:23:6.98:97,7,0	0/1:11,0:20:21.01:244,0,21	0/1:29,0:35:64.70:92,0,65	0/1:28,0:28:99:324,0,171	1/1:14,5:21:35.59:446,36,0	./.	./.	./.	./.	./.	0/0:22,0:22:66.17:0,66,1021	./.	./.	./.	./.	./.	./.	./.	./.	./.	1/1:11,12:25:19.04:337,19,0	1/1:12,6:20:8.83:548,9,0	1/1:4,5:11:0.61:221,1,0	1/1:3,3:6:17.38:212,17,0
chr10	19975687	.	G	GCACACC	7705.41	PASS	AB=0.849;AC=42;AF=0.750;AN=56;BaseQRankSum=4.832;DP=455;FS=1.463;HRun=0;HaplotypeScore=252.3435;InbreedingCoeff=0.2160;MQ=45.33;MQ0=1;MQRankSum=-2.340;QD=20.88;ReadPosRankSum=0.995;VQSLOD=4.3481;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:33,1:34:99:232,0,167	0/1:5,5:10:4.60:515,0,5	0/0:32,0:20:24.93:0,25,444	0/0:34,0:28:44.62:0,45,684	0/1:21,5:25:22.91:65,0,23	1/1:24,0:24:16.81:634,17,0	1/1:39,0:39:8.28:426,8,0	0/1:34,0:34:99:439,0,465	0/1:16,2:18:12.20:394,0,12	1/1:4,0:4:12.04:163,12,0	1/1:7,0:7:21.06:274,21,0	1/1:10,0:10:30.01:338,30,0	1/1:10,0:10:27.04:337,27,0	1/1:13,0:13:33:376,33,0	0/0:20,0:20:57.14:0,57,1055	1/1:4,0:4:11.99:133,12,0	1/1:8,0:8:17.31:141,17,0	1/1:11,0:11:27.04:356,27,0	1/1:5,0:5:12:147,12,0	1/1:11,0:11:21.02:250,21,0	1/1:15,0:15:6.69:164,7,0	1/1:10,0:10:27.03:287,27,0	1/1:3,0:3:9.02:95,9,0	1/1:5,0:5:11.95:120,12,0	0/1:22,6:28:15.50:443,0,16	0/1:17,4:21:99:693,0,124	1/1:10,3:13:29.90:489,30,0	0/1:4,2:6:49.36:196,0,49
chr10	19976035	.	G	GC	9392.86	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-13.060;DP=561;FS=8.316;HRun=5;HaplotypeScore=54.0383;InbreedingCoeff=0.9969;MQ=88.02;MQ0=0;MQRankSum=-1.850;QD=33.55;ReadPosRankSum=3.816;VQSLOD=5.0219;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:87.22:0,87,935	0/0:7,0:7:18.05:0,18,193	0/0:26,0:26:48.94:0,49,632	0/0:24,0:24:57.36:0,57,516	0/0:19,0:19:51.09:0,51,535	0/0:23,0:23:51.11:0,51,540	0/0:27,0:27:78.20:0,78,837	0/0:17,0:17:42.07:0,42,430	0/0:17,0:17:48.12:0,48,516	1/1:3,25:28:72.23:946,72,0	1/1:2,9:11:30.10:388,30,0	1/1:2,20:22:54.18:708,54,0	1/1:1,13:14:33.11:434,33,0	1/1:3,17:20:51.16:657,51,0	0/0:15,0:15:42.09:0,42,444	1/1:0,11:11:27.09:355,27,0	1/1:2,32:34:87.28:1144,87,0	1/1:1,32:33:90.29:1184,90,0	1/1:2,14:16:42.10:521,42,0	1/1:1,10:11:18.06:236,18,0	1/1:0,26:26:69.22:901,69,0	1/1:1,9:10:30.10:384,30,0	1/1:0,16:16:48.16:627,48,0	1/1:4,24:28:69.22:907,69,0	0/0:20,0:19:45.08:0,45,472	0/0:20,1:20:23.79:0,24,605	0/0:23,0:23:69.17:0,69,741	0/0:10,0:10:24.06:0,24,257
chr10	19976287	.	C	CT	4121.79	PASS	AB=0.732;AC=42;AF=0.750;AN=56;BaseQRankSum=1.432;DP=591;FS=3.281;HRun=14;HaplotypeScore=82.2069;InbreedingCoeff=0.0998;MQ=75.07;MQ0=2;MQRankSum=-0.669;QD=7.70;ReadPosRankSum=1.089;VQSLOD=3.0620;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,2:23:31.41:169,31,0	1/1:4,1:12:14.27:73,14,0	0/1:20,0:17:14.67:15,0,30	0/1:14,0:9:1.56:2,0,13	1/1:11,3:32:49.69:271,50,0	0/1:8,17:26:10.97:105,0,11	1/1:7,11:20:4.41:141,4,0	0/0:31,0:33:47.94:0,48,292	1/1:2,1:14:19.89:99,20,0	0/1:9,12:22:15.99:232,0,16	0/1:10,6:16:18.91:61,0,19	1/1:5,12:19:19.08:149,19,0	0/1:7,10:17:11.54:158,0,12	1/1:5,8:13:9.88:81,10,0	0/0:21,0:23:54.18:0,54,336	0/1:7,14:22:32.52:222,0,33	1/1:10,22:32:25.72:350,26,0	1/1:3,18:24:41.63:337,42,0	1/1:9,10:21:6.89:212,7,0	0/1:17,4:21:10.47:136,0,10	0/1:2,7:10:9.96:32,0,10	1/1:5,12:17:6.85:163,7,0	0/1:10,4:15:3.95:79,0,4	1/1:5,9:15:14.84:120,15,0	1/1:10,2:30:39.02:202,39,0	1/1:14,1:34:64.60:394,65,0	1/1:9,0:31:43.28:222,43,0	1/1:4,1:14:19.89:99,20,0
chr10	19977275	.	CGG	C	3787.71	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=4.645;DP=562;FS=1.867;HRun=11;HaplotypeScore=81.0578;InbreedingCoeff=0.9198;MQ=83.64;MQ0=2;MQRankSum=-1.072;QD=22.41;ReadPosRankSum=8.781;VQSLOD=2.6488;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,28:33:81.18:852,81,0	1/1:0,11:12:29.80:299,30,0	0/0:34,0:30:33.32:0,33,362	0/0:17,0:18:32.38:0,32,324	1/1:5,25:30:78.16:820,78,0	0/0:14,0:14:6.01:0,6,56	0/0:10,0:10:2.99:0,3,23	0/0:15,0:20:15.01:0,15,156	1/1:2,1:18:23.23:131,23,0	0/0:16,0:16:21.05:0,21,282	0/0:16,0:16:24.07:0,24,337	0/0:15,0:17:33.03:0,33,405	0/0:12,0:14:29.56:0,30,376	0/0:19,0:20:37.35:0,37,470	0/0:15,0:18:38.45:0,38,464	0/0:17,0:21:46.32:0,46,581	0/0:33,0:37:89.98:0,90,1231	0/0:20,1:21:10.17:0,10,505	0/0:17,0:19:38.08:0,38,486	0/0:16,0:19:37.57:0,38,451	0/0:17,0:17:24.04:0,24,308	0/0:18,0:19:33.09:0,33,459	0/0:10,0:12:20.37:0,20,199	0/0:28,0:29:62.60:0,63,859	1/1:2,17:19:45.11:479,45,0	1/1:6,17:23:4.91:465,5,0	1/1:4,13:18:35.68:347,36,0	1/1:3,12:16:38.83:395,39,0
chr10	19977285	.	G	GGGGA	118.23	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=0.733;DP=533;FS=0.000;HRun=0;HaplotypeScore=120.2829;InbreedingCoeff=0.6856;MQ=79.83;MQ0=2;MQRankSum=-2.913;QD=2.81;ReadPosRankSum=-2.251;VQSLOD=1.8212;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:32:81.04:0,81,850	0/0:13,0:13:33.07:0,33,352	0/0:25,0:21:39.84:0,40,440	0/0:19,0:19:18.86:0,19,254	0/0:29,0:31:93:0,93,942	1/1:4,8:15:6.02:153,6,0	1/1:2,1:14:3.48:63,3,0	0/0:21,0:21:41.49:0,41,325	0/0:19,0:19:41.74:0,42,396	0/0:12,0:12:27.05:0,27,337	0/0:11,0:11:27.05:0,27,367	0/0:16,0:16:43.95:0,44,472	0/0:18,0:18:38.89:0,39,420	0/0:19,0:19:51:0,51,623	0/0:17,0:17:39.03:0,39,504	0/0:22,0:22:59.65:0,60,748	0/0:34,0:34:89.37:0,89,1377	0/0:16,0:16:48.05:0,48,628	0/0:16,0:16:48.11:0,48,639	0/0:21,0:21:53.94:0,54,633	0/0:16,0:15:38.83:0,39,440	0/0:16,0:16:41.36:0,41,557	0/1:13,0:13:3.55:4,0,278	0/0:27,0:27:66.55:0,67,927	0/0:19,0:19:51.12:0,51,538	0/0:21,0:21:63.10:0,63,663	0/0:16,0:16:36.10:0,36,389	0/0:13,0:13:39.11:0,39,423
chr10	19977403	.	G	GTT	4559.28	PASS	AB=0.562;AC=43;AF=0.768;AN=56;BaseQRankSum=5.652;DP=616;FS=3.342;HRun=9;HaplotypeScore=112.3438;InbreedingCoeff=0.7177;MQ=79.81;MQ0=0;MQRankSum=-3.021;QD=8.54;ReadPosRankSum=2.210;VQSLOD=2.0935;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:6,1:31:55.41:226,55,0	0/1:2,0:11:8.46:62,0,8	0/0:13,0:15:38.75:0,39,362	0/0:16,0:16:30.31:0,30,279	1/1:4,1:28:59.32:268,59,0	0/0:15,0:16:32.97:0,33,406	0/0:12,0:12:30.04:0,30,310	1/1:5,18:26:60.13:826,60,0	1/1:3,2:14:27.05:283,27,0	0/1:9,0:32:52.78:185,0,53	1/1:0,1:27:62.90:252,63,0	1/1:3,0:17:19.96:68,20,0	1/1:4,1:23:45.43:192,45,0	1/1:3,0:19:29.21:99,29,0	0/0:23,0:23:63.16:0,63,670	0/1:5,0:25:2.80:109,0,3	1/1:3,0:25:20.98:139,21,0	1/1:2,0:24:49.91:171,50,0	1/1:2,0:17:38.92:173,39,0	1/1:4,0:28:25.89:159,26,0	1/1:3,0:20:8.84:101,9,0	1/1:6,0:24:11.52:142,12,0	1/1:6,1:25:43.68:236,44,0	1/1:5,2:28:24.53:223,25,0	1/1:2,0:20:13.57:114,14,0	1/1:3,0:25:55.89:219,56,0	1/1:4,0:28:47.42:173,47,0	1/1:0,0:17:39.93:137,40,0
chr10	19978546	.	GATAATAATA	G	1877.73	PASS	AB=0.778;AC=25;AF=0.962;AN=26;BaseQRankSum=1.614;DP=181;FS=0.000;HRun=0;HaplotypeScore=52.9147;InbreedingCoeff=-0.1605;MQ=64.86;MQ0=1;MQRankSum=-1.614;QD=16.19;ReadPosRankSum=-1.255;VQSLOD=1.6413;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	1/1:2,1:3:3.01:82,3,0	./.	./.	./.	1/1:4,6:11:12.04:308,12,0	./.	1/1:16,0:16:2.88:15,3,0	1/1:4,1:5:3.01:82,3,0	1/1:4,0:5:3.01:63,3,0	./.	./.	./.	1/1:6,0:8:3.01:63,3,0	1/1:2,1:3:3.01:82,3,0	./.	1/1:13,0:21:14.88:265,15,0	0/1:10,0:14:11.96:117,0,12	./.	./.	./.	./.	./.	./.	1/1:6,4:10:12.04:327,12,0	1/1:3,1:4:3.01:82,3,0	1/1:5,1:6:3.01:82,3,0	1/1:5,4:10:15.05:390,15,0
chr10	19978854	.	AAGCC	A	21190.50	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=5.586;DP=614;FS=0.000;HRun=0;HaplotypeScore=118.3092;InbreedingCoeff=0.9792;MQ=90.61;MQ0=6;MQRankSum=-9.986;QD=40.06;ReadPosRankSum=5.595;VQSLOD=4.9800;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,42:46:99:1853,102,0	1/1:2,7:9:21.07:380,21,0	0/0:25,0:25:63.15:0,63,1407	0/0:29,0:29:76.14:0,76,1798	1/1:0,10:10:24:364,24,0	1/1:5,14:19:36.12:655,36,0	1/1:2,20:22:45.11:784,45,0	1/1:9,16:25:48.15:842,48,0	1/1:1,21:22:54.14:947,54,0	1/1:2,21:23:66.20:1153,66,0	1/1:1,5:6:15.05:272,15,0	1/1:3,26:29:78.27:1402,78,0	1/1:0,21:21:48.16:873,48,0	1/1:3,27:28:72.25:1310,72,0	0/0:31,0:31:81.28:0,81,2113	1/1:3,26:28:69.24:1255,69,0	1/1:2,26:28:69.23:1255,69,0	1/1:5,23:28:54.19:980,54,0	1/1:3,14:16:36.10:600,36,0	1/1:0,9:9:21.07:382,21,0	1/1:6,23:29:45.49:715,45,0	1/1:2,13:14:27.01:422,27,0	1/1:0,7:7:11.99:184,12,0	1/1:0,24:23:57.20:1037,57,0	1/1:0,13:13:36.12:654,36,0	1/1:0,25:25:72.25:1290,72,0	1/1:9,23:32:57.20:1037,57,0	1/1:0,10:10:30.10:546,30,0
chr10	19980436	.	T	TGAA	15490.06	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-13.855;DP=636;FS=4.595;HRun=0;HaplotypeScore=85.1279;InbreedingCoeff=0.9967;MQ=79.64;MQ0=0;MQRankSum=-5.692;QD=50.95;ReadPosRankSum=2.487;VQSLOD=6.9196;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:58:99:0,170,2684	0/0:7,0:7:21.07:0,21,343	0/0:18,0:18:48.14:0,48,711	0/0:29,0:26:61.68:0,62,988	0/0:30,0:30:84.27:0,84,1338	0/0:18,0:18:54.18:0,54,880	0/0:20,0:20:57.19:0,57,931	0/0:33,0:33:90.30:0,90,1444	0/0:15,0:15:42.13:0,42,659	1/1:1,19:21:60.18:1239,60,0	1/1:2,16:19:42.03:842,42,0	1/1:1,25:26:57.20:1272,57,0	1/1:3,12:16:36.08:743,36,0	1/1:3,17:20:45.11:944,45,0	0/0:21,0:21:60.20:0,60,980	1/1:1,25:26:69.24:1541,69,0	1/1:0,25:26:63.17:1360,63,0	1/1:1,17:18:39.13:871,39,0	1/1:5,14:20:57.15:1146,57,0	1/1:3,21:27:69.08:1328,69,0	1/1:2,25:27:63.22:1407,63,0	1/1:3,17:22:45.07:895,45,0	1/1:1,22:23:59.87:1301,60,0	1/1:0,13:13:27.09:602,27,0	0/0:17,0:17:51.16:0,51,809	0/0:27,1:28:14.37:0,14,1162	0/0:17,0:17:48.16:0,48,778	0/0:21,0:21:63.21:0,63,998
chr10	19981673	.	AGTGTGTGTGTGTGTGTGTGT	A	1857.56	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=6.259;DP=533;FS=3.844;HRun=0;HaplotypeScore=231.7105;InbreedingCoeff=0.7620;MQ=61.95;MQ0=11;MQRankSum=-4.253;QD=17.20;ReadPosRankSum=0.767;VQSLOD=1.9721;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:27,16:41:6.01:282,6,0	1/1:7,2:9:2.87:159,3,0	0/0:30,0:20:12.04:0,12,332	0/0:31,0:22:18.06:0,18,544	0/0:7,4:11:2.99:0,3,24	0/0:23,0:23:28.04:0,28,1774	0/0:22,0:21:35.33:0,35,1823	0/0:18,0:18:9.03:0,9,409	0/0:16,0:17:20.86:0,21,1460	0/0:14,0:13:21.07:0,21,1419	0/0:12,0:12:12.03:0,12,434	0/0:24,0:24:42.14:0,42,2727	0/0:13,0:13:21.07:0,21,1369	0/0:18,0:18:33.11:0,33,2243	0/0:15,0:15:21.06:0,21,1465	0/0:14,0:14:19.96:0,20,1332	0/0:18,0:19:41.40:0,41,2411	0/0:13,0:19:20.45:0,20,1384	0/0:16,0:14:15.88:0,16,254	0/0:18,0:18:21.07:0,21,1423	0/0:33,0:33:47.26:0,47,2482	0/0:18,0:20:12.04:0,12,864	0/0:7,0:7:9.03:0,9,529	0/0:28,0:28:63.69:0,64,4163	1/1:9,9:18:21.07:967,21,0	1/1:8,4:13:8.51:284,9,0	1/1:6,8:14:3.01:160,3,0	1/1:8,3:11:2.96:160,3,0
chr10	19981980	.	GGTGTGT	G	1916.99	PASS	AB=0.952;AC=36;AF=0.783;AN=46;BaseQRankSum=5.750;DP=508;FS=6.872;HRun=0;HaplotypeScore=114.2032;InbreedingCoeff=0.4551;MQ=69.68;MQ0=21;MQRankSum=-4.614;QD=6.16;ReadPosRankSum=1.252;VQSLOD=1.7089;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:23:8.65:76,9,0	./.	./.	./.	1/1:11,2:14:3.48:62,3,0	0/0:18,0:20:17.21:0,17,470	0/0:29,0:30:23.21:0,23,628	./.	0/0:16,0:17:2.14:0,2,23	1/1:17,5:22:12.02:205,12,0	0/1:8,0:8:0:0,0,0	1/1:8,3:14:10.28:166,10,0	1/1:15,5:20:6.02:121,6,0	1/1:13,6:20:11.98:221,12,0	0/0:15,0:15:27.08:0,27,668	1/1:10,9:20:20.89:364,21,0	1/1:20,0:18:2.22:46,2,0	1/1:9,4:12:3.01:61,3,0	1/1:15,0:14:3.01:32,3,0	1/1:9,1:9:3.01:61,3,0	./.	0/1:17,2:19:10.81:88,0,11	1/1:11,0:11:3.01:50,3,0	1/1:14,6:21:3.01:40,3,0	1/1:11,0:17:9.03:126,9,0	1/1:11,0:11:6.49:84,6,0	1/1:10,0:15:12.04:167,12,0	1/1:12,0:11:7.27:86,7,0
chr10	19985882	.	GT	G	16880.36	PASS	AB=1.000;AC=51;AF=0.911;AN=56;BaseQRankSum=2.327;DP=643;FS=11.810;HRun=5;HaplotypeScore=66.3532;InbreedingCoeff=0.7336;MQ=75.21;MQ0=0;MQRankSum=-4.877;QD=28.13;ReadPosRankSum=1.852;VQSLOD=4.3461;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,41:44:99:1191,105,0	1/1:0,10:10:24.07:272,24,0	0/0:16,0:17:39.87:0,40,509	0/1:11,0:11:11.78:12,0,222	1/1:0,23:23:65.84:736,66,0	1/1:2,26:28:78.09:852,78,0	1/1:2,29:31:69.20:782,69,0	1/1:1,28:29:81.21:907,81,0	1/1:2,21:23:54.15:612,54,0	1/1:1,18:19:54.13:592,54,0	1/1:1,23:24:66.19:748,66,0	1/1:1,27:28:66.19:748,66,0	1/1:1,12:13:33.09:374,33,0	1/1:0,19:19:48.14:544,48,0	0/0:26,0:26:78.25:0,78,1051	1/1:1,5:6:15.04:170,15,0	1/1:1,40:41:99:1259,111,0	1/1:3,26:28:63.18:715,63,0	1/1:2,12:14:36.08:393,36,0	1/1:0,26:26:78.18:867,78,0	1/1:1,33:34:75.21:850,75,0	1/1:4,23:27:60.17:678,60,0	1/1:1,20:21:57.16:646,57,0	1/1:1,22:23:60.17:680,60,0	1/1:1,18:19:54.15:612,54,0	1/1:3,31:34:93.22:1026,93,0	1/1:1,18:19:51.15:578,51,0	1/1:2,3:5:3.01:34,3,0
chr10	19985965	.	TGAC	T	2538.26	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.731;DP=611;FS=17.862;HRun=0;HaplotypeScore=93.0771;InbreedingCoeff=0.8394;MQ=73.51;MQ0=0;MQRankSum=-2.390;QD=47.00;ReadPosRankSum=-0.376;VQSLOD=4.2764;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,144,3431	0/0:14,0:14:39.13:0,39,959	0/0:6,1:9:5.05:0,5,176	0/0:12,0:12:0.87:0,1,111	0/0:19,0:19:57.18:0,57,1350	1/1:4,23:27:78.27:1430,78,0	1/1:0,27:27:66.23:1230,66,0	0/0:12,0:12:36.12:0,36,841	0/0:24,0:24:63.22:0,63,1535	0/0:13,0:13:36.11:0,36,823	0/0:17,0:17:51.16:0,51,1155	0/0:30,0:30:81.27:0,81,1936	0/0:25,0:25:75.26:0,75,1821	0/0:21,0:21:63.22:0,63,1545	0/0:36,0:36:99:0,108,2585	0/0:16,0:16:48.16:0,48,1177	0/0:32,0:32:93.32:0,93,2292	0/0:26,0:26:72.23:0,72,1694	0/0:16,0:16:48.15:0,48,1085	0/0:18,0:18:48.15:0,48,1102	0/0:26,0:26:75.26:0,75,1845	0/0:23,0:23:66.23:0,66,1614	0/0:17,0:17:48.16:0,48,1135	0/0:24,0:24:69.24:0,69,1689	0/0:23,0:23:69.22:0,69,1624	0/0:18,0:18:54.17:0,54,1238	0/0:24,0:24:72.23:0,72,1719	0/0:10,0:10:30.10:0,30,736
chr10	19986727	.	CGT	C	9363.78	PASS	AB=0.774;AC=43;AF=0.768;AN=56;BaseQRankSum=0.638;DP=799;FS=19.677;HRun=0;HaplotypeScore=150.8344;InbreedingCoeff=0.6275;MQ=47.36;MQ0=45;MQRankSum=3.261;QD=14.72;ReadPosRankSum=2.032;VQSLOD=3.6917;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:15,33:47:65.82:738,66,0	1/1:4,5:8:8.77:106,9,0	0/0:38,0:8:9.03:0,9,139	0/0:49,1:16:22.50:0,22,228	1/1:9,14:23:28.56:283,29,0	0/0:24,1:24:3.09:0,3,579	0/1:24,4:28:32.45:32,0,431	1/1:9,13:23:22.86:378,23,0	0/0:11,0:21:18:0,18,158	1/1:15,16:29:51.12:574,51,0	1/1:13,16:28:30.09:357,30,0	1/1:13,18:29:20.93:249,21,0	0/1:11,18:26:11.80:335,0,12	1/1:12,17:28:33.10:393,33,0	0/0:26,0:26:21.97:0,22,489	1/1:5,21:25:48.15:572,48,0	1/1:10,26:32:57.01:657,57,0	1/1:10,20:27:31.53:598,32,0	1/1:9,5:12:14.86:146,15,0	1/1:6,12:18:33.10:393,33,0	1/1:19,44:63:86.93:993,87,0	1/1:7,18:24:12.09:238,12,0	1/1:9,16:26:23.91:264,24,0	1/1:12,23:36:59.52:671,60,0	1/1:9,16:25:36.11:429,36,0	1/1:6,19:25:62.93:727,63,0	1/1:4,7:11:15.04:177,15,0	0/1:8,2:9:54.26:54,0,83
chr10	19987979	.	A	ATGAG	2447.34	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-3.594;DP=782;FS=3.364;HRun=0;HaplotypeScore=178.8242;InbreedingCoeff=0.9920;MQ=85.03;MQ0=0;MQRankSum=-4.315;QD=78.95;ReadPosRankSum=0.420;VQSLOD=3.8973;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,117,2413	0/0:14,0:14:42.14:0,42,870	0/0:24,0:24:66.22:0,66,1291	0/0:26,0:26:72.17:0,72,1303	0/0:28,0:28:81.26:0,81,1635	0/0:33,0:32:93.32:0,93,1950	0/0:25,0:25:71.46:0,71,1454	0/0:26,0:26:72.23:0,72,1439	1/1:3,28:31:90.31:2542,90,0	0/0:41,0:41:99:0,123,2545	0/0:21,0:21:57.17:0,57,1155	0/0:29,0:29:84.27:0,84,1723	0/0:31,0:31:84.28:0,84,1720	0/0:29,0:29:78.25:0,78,1563	0/0:33,0:33:99:0,99,1979	0/0:30,0:30:90.30:0,90,1837	0/0:28,0:28:75.26:0,75,1572	0/0:16,0:16:42.14:0,42,875	0/0:27,0:27:81.27:0,81,1662	0/0:25,0:25:72.23:0,72,1471	0/0:34,0:34:96.33:0,96,2013	0/0:24,0:24:72.24:0,72,1451	0/0:26,0:26:69.15:0,69,1350	0/0:29,0:29:87.30:0,87,1824	0/0:33,0:33:87.29:0,87,1787	0/0:34,0:34:99:0,99,1996	0/0:38,0:38:99:0,108,2182	0/0:7,0:7:18.04:0,18,321
chr10	19990935	.	AG	A	6622.59	PASS	AB=1.000;AC=54;AF=0.964;AN=56;BaseQRankSum=-3.781;DP=605;FS=2.740;HRun=2;HaplotypeScore=160.9321;InbreedingCoeff=0.0321;MQ=70.05;MQ0=2;MQRankSum=-3.894;QD=10.95;ReadPosRankSum=3.978;VQSLOD=3.5281;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:26,2:28:7.96:19,8,0	1/1:9,0:9:2.30:6,2,0	0/1:32,0:28:18.23:380,0,18	0/1:23,0:23:99:185,0,149	1/1:15,0:15:7.71:37,8,0	1/1:31,0:31:64.35:291,64,0	1/1:16,0:16:30.99:165,31,0	1/1:29,0:29:81.19:669,81,0	1/1:0,17:17:48.16:623,48,0	1/1:21,0:21:59.74:349,60,0	1/1:16,0:16:39.21:178,39,0	1/1:20,0:20:39.17:177,39,0	1/1:23,1:24:58.97:292,59,0	1/1:25,0:25:61.55:278,62,0	1/1:26,0:26:41.97:190,42,0	1/1:29,0:29:67.15:304,67,0	1/1:18,2:20:33.79:178,34,0	1/1:15,9:24:63.35:459,63,0	1/1:16,0:16:42.99:285,43,0	1/1:18,0:18:39.17:177,39,0	1/1:34,1:35:61.80:321,62,0	1/1:16,0:16:30.82:140,31,0	1/1:22,0:21:50.36:228,50,0	1/1:18,0:18:33.57:152,34,0	1/1:10,0:10:4.84:24,5,0	1/1:28,0:28:42.38:461,42,0	1/1:22,0:22:7.84:19,8,0	1/1:15,0:15:7.71:37,8,0
chr10	19990936	.	G	GACA	7578.35	PASS	AB=1.000;AC=24;AF=0.429;AN=56;BaseQRankSum=-16.207;DP=611;FS=4.354;HRun=0;HaplotypeScore=178.9745;InbreedingCoeff=0.2513;MQ=68.96;MQ0=2;MQRankSum=4.754;QD=20.65;ReadPosRankSum=-6.125;VQSLOD=3.2078;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,23:28:45.15:1109,45,0	1/1:0,8:8:8.97:222,9,0	0/1:30,0:26:99:252,0,157	0/1:23,0:23:97.53:98,0,245	1/1:1,14:16:33.11:813,33,0	0/0:31,0:31:62.76:0,63,334	0/1:18,0:18:25.05:25,0,127	0/1:30,0:30:83.79:470,0,84	0/1:17,0:17:35.88:36,0,93	0/1:21,0:21:99:124,0,151	0/0:16,0:16:30.10:0,30,161	0/0:19,0:19:40.25:0,40,214	0/0:23,0:24:21.62:0,22,267	0/0:25,0:26:59.96:0,60,321	0/0:24,0:24:42.96:0,43,229	0/0:30,0:30:66.60:0,67,352	0/1:20,0:20:4.23:4,0,134	0/1:25,0:25:99:191,0,174	0/1:15,0:15:99:114,0,109	0/0:18,0:19:1.38:0,1,160	0/1:36,0:36:14.96:15,0,218	0/0:17,0:17:31.43:0,31,164	0/0:21,0:21:49.26:0,49,259	0/0:17,0:17:31.81:0,32,167	1/1:1,10:12:15.05:369,15,0	1/1:1,28:30:87.28:1815,87,0	1/1:0,21:23:45.11:1108,45,0	1/1:0,15:15:33.11:812,33,0
chr10	19992614	.	T	TC	2347.97	PASS	AB=0.746;AC=39;AF=0.696;AN=56;BaseQRankSum=-3.842;DP=434;FS=2.006;HRun=10;HaplotypeScore=58.1632;InbreedingCoeff=0.0497;MQ=74.25;MQ0=0;MQRankSum=-0.680;QD=6.38;ReadPosRankSum=-2.001;VQSLOD=0.9979;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:12,1:13:6:55,6,0	1/1:1,0:3:3:25,3,0	0/1:17,0:17:1.83:2,0,117	0/0:23,0:22:12.99:0,13,176	1/1:11,7:18:0.47:1,0,0	0/1:5,9:14:12.60:84,0,13	0/1:9,7:16:34.19:79,0,34	1/1:10,10:20:5.29:252,5,0	1/1:12,0:12:11.90:88,12,0	1/1:6,7:13:15.04:159,15,0	0/1:9,5:14:9.60:112,0,10	1/1:3,11:14:12.03:128,12,0	0/0:14,0:15:25.98:0,26,203	0/1:10,13:23:9.50:112,0,10	0/0:28,0:28:71.89:0,72,587	0/1:5,22:27:43.81:187,0,44	0/1:18,2:20:28.91:288,0,29	0/1:4,9:13:37.19:52,0,37	0/1:15,3:18:4.33:84,0,4	1/1:15,0:15:8.98:83,9,0	0/1:12,0:12:5.16:84,0,5	1/1:9,1:10:6.02:64,6,0	1/1:5,5:10:12.02:128,12,0	0/1:7,12:19:12.56:84,0,13	1/1:5,5:10:3.01:32,3,0	1/1:8,1:13:8.57:60,9,0	1/1:19,0:19:26.61:196,27,0	1/1:3,1:4:8.94:74,9,0
chr10	19993424	.	CTCTG	C	16416.13	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=15.430;DP=904;FS=1.588;HRun=0;HaplotypeScore=183.8302;InbreedingCoeff=0.9984;MQ=57.10;MQ0=5;MQRankSum=0.076;QD=33.85;ReadPosRankSum=4.786;VQSLOD=4.9075;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:60,0:60:99:0,160,3885	0/0:17,0:17:36.12:0,36,927	0/0:38,0:28:72.19:0,72,1608	0/0:57,0:39:84.18:0,84,1814	0/0:28,0:28:56.98:0,57,1464	0/0:25,0:25:72.06:0,72,1753	0/0:30,0:30:84.29:0,84,2118	1/1:11,35:45:86.13:1691,86,0	0/0:25,0:25:60.21:0,60,1536	1/1:6,28:34:69.34:1270,69,0	1/1:3,11:14:23.54:386,24,0	1/1:6,34:40:81.28:1456,81,0	1/1:4,29:33:63.21:1108,63,0	1/1:6,28:34:63.17:1098,63,0	0/0:35,0:35:99:0,99,2514	1/1:2,33:35:87.25:1527,87,0	1/1:5,33:38:76.50:1348,77,0	1/1:2,24:27:54.46:925,54,0	1/1:5,11:13:33.08:522,33,0	1/1:4,23:27:47.31:1030,47,0	1/1:6,65:71:99:2275,133,0	1/1:0,18:18:27.09:485,27,0	1/1:2,11:13:18.06:323,18,0	1/1:4,35:39:54.65:972,55,0	0/0:23,0:23:57.20:0,57,1481	0/0:41,1:41:57.52:0,58,2604	0/0:24,0:24:60.21:0,60,1485	0/0:14,0:14:36.12:0,36,934
chr10	19993650	.	A	ATGTC	20254.64	PASS	AB=0.538;AC=49;AF=0.875;AN=56;BaseQRankSum=-1.344;DP=863;FS=15.091;HRun=0;HaplotypeScore=202.3267;InbreedingCoeff=0.7727;MQ=65.45;MQ0=5;MQRankSum=-1.833;QD=26.97;ReadPosRankSum=1.515;VQSLOD=3.3733;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:18,40:57:42.17:959,42,0	1/1:8,11:19:24:453,24,0	0/0:33,0:23:48.83:0,49,577	0/0:52,0:42:36.10:0,36,783	1/1:20,3:23:27.02:451,27,0	1/1:11,22:33:21.03:327,21,0	1/1:13,26:39:14.94:243,15,0	1/1:18,36:57:99:2196,129,0	1/1:4,9:13:14.97:279,15,0	1/1:19,5:22:55.95:888,56,0	1/1:6,11:18:24.08:484,24,0	1/1:6,25:32:6.02:154,6,0	1/1:9,16:25:14.88:236,15,0	1/1:3,23:26:15.05:301,15,0	0/0:24,0:24:51.14:0,51,824	1/1:8,15:23:5.94:133,6,0	1/1:27,3:30:69.08:1332,69,0	1/1:12,4:16:39.52:738,40,0	1/1:9,12:23:53.65:853,54,0	1/1:7,11:18:14.63:279,15,0	1/1:48,2:50:89.64:1718,90,0	1/1:23,3:26:47.97:944,48,0	1/1:7,2:9:14.94:280,15,0	1/1:65,5:70:99:3084,124,0	1/1:12,21:33:29.48:539,29,0	1/1:15,35:50:99:2539,132,0	1/1:8,18:27:36.11:655,36,0	0/1:1,6:7:7.90:190,0,8
chr10	19993670	.	C	CTGTG	3443.77	PASS	AB=0.882;AC=28;AF=0.560;AN=50;BaseQRankSum=-7.946;DP=773;FS=10.901;HRun=0;HaplotypeScore=257.4776;InbreedingCoeff=0.5319;MQ=56.35;MQ0=12;MQRankSum=2.996;QD=7.60;ReadPosRankSum=-3.539;VQSLOD=0.7979;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:42:8.95:0,9,74	0/0:11,0:11:5.77:0,6,53	./.	./.	0/0:16,0:21:2.96:0,3,19	0/0:30,0:32:24.40:0,24,331	0/0:34,0:37:22.26:0,22,194	0/0:51,0:48:2.22:0,2,7	1/1:17,1:18:14.86:196,15,0	1/1:18,7:26:30.68:489,31,0	0/1:14,1:16:0.56:119,0,1	1/1:26,1:27:17.33:229,17,0	1/1:20,2:22:0.09:268,0,0	1/1:21,2:22:12.02:188,12,0	1/1:16,0:28:11.90:93,12,0	1/1:26,2:28:27.20:455,27,0	0/1:23,0:25:19.78:58,0,20	1/1:15,2:19:12.08:376,12,0	1/1:23,0:22:3.01:30,3,0	1/1:24,1:24:16.48:184,16,0	0/1:50,0:47:10.09:156,0,10	1/1:21,9:35:10.32:170,10,0	0/1:9,4:14:25.73:85,0,26	1/1:66,3:70:23.78:349,24,0	0/0:24,0:24:12.42:0,12,109	0/0:34,0:35:27.79:0,28,226	0/0:18,0:18:11.51:0,12,93	./.
chr10	19993673	.	TGTGTGTGTGTGTGTGTGTG	T	3222.65	PASS	AB=0.787;AC=6;AF=0.107;AN=56;BaseQRankSum=6.906;DP=755;FS=6.077;HRun=0;HaplotypeScore=379.9191;InbreedingCoeff=-0.1257;MQ=54.93;MQ0=13;MQRankSum=-6.493;QD=22.23;ReadPosRankSum=0.146;VQSLOD=1.0493;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:33,7:38:84.73:466,0,85	0/1:8,3:11:68.71:369,0,69	0/0:12,0:10:21.07:0,21,266	0/0:23,0:19:22.94:0,23,440	0/1:13,6:20:63.18:159,0,63	0/0:34,0:34:43.39:0,43,2649	0/0:38,0:38:36.01:0,36,1951	0/0:51,0:48:99:0,141,2838	0/0:18,0:18:30.22:0,30,1932	0/0:27,0:24:66.05:0,66,4312	0/0:17,0:17:24.20:0,24,1804	0/0:24,0:24:19.63:0,20,1639	0/0:23,0:23:29.57:0,30,1699	0/0:23,0:22:20.69:0,21,1619	0/0:28,0:28:53.84:0,54,1965	0/0:27,0:27:36.23:0,36,3111	0/0:23,0:23:44.09:0,44,2358	0/0:19,0:19:57.17:0,57,2995	0/0:24,0:23:63.09:0,63,1721	0/0:25,0:24:21.27:0,21,1688	0/0:49,0:45:63.38:0,63,2579	0/0:35,0:35:43.83:0,44,2022	0/0:16,0:15:21.05:0,21,1328	0/0:69,0:69:99:0,138,5451	0/1:17,6:24:83.09:522,0,83	0/1:26,8:33:99:1283,0,749	0/1:11,4:16:93.07:548,0,93	0/0:4,0:4:5.98:0,6,46
chr10	19994644	.	T	TA	13782.74	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-8.857;DP=679;FS=0.000;HRun=10;HaplotypeScore=70.2132;InbreedingCoeff=0.9626;MQ=77.69;MQ0=0;MQRankSum=-5.008;QD=22.59;ReadPosRankSum=2.549;VQSLOD=5.6645;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,31:34:84.21:896,84,0	1/1:2,13:15:39.10:415,39,0	0/0:23,0:21:29.32:0,29,236	0/0:25,0:25:13.38:0,13,312	1/1:8,27:37:59.23:804,59,0	1/1:5,15:20:36.09:384,36,0	1/1:5,11:16:30.08:320,30,0	1/1:10,18:28:55.25:562,55,0	1/1:4,24:28:44.53:679,45,0	1/1:11,25:36:72.14:746,72,0	1/1:4,16:21:26.28:455,26,0	1/1:3,19:22:51.13:544,51,0	1/1:8,19:27:45.11:479,45,0	1/1:5,17:22:48.12:510,48,0	0/0:21,0:21:47.94:0,48,394	1/1:2,22:24:35.20:583,35,0	1/1:6,24:30:10.87:527,11,0	1/1:2,16:18:42.11:448,42,0	1/1:5,13:18:39.10:415,39,0	1/1:8,25:33:28.91:718,29,0	1/1:5,15:20:29.17:374,29,0	1/1:7,15:22:51.12:538,51,0	1/1:4,25:29:53.51:763,54,0	1/1:2,17:19:48.12:512,48,0	1/1:4,12:16:11.45:327,11,0	1/1:4,17:22:53.95:550,54,0	1/1:5,29:36:58.96:811,59,0	1/1:2,14:16:20.47:423,20,0
chr10	19995612	.	TATGCATGTATAC	T	719.39	PASS	AC=4;AF=0.077;AN=52;BaseQRankSum=6.390;DP=1144;FS=3.712;HRun=0;HaplotypeScore=276.3746;InbreedingCoeff=0.9903;MQ=46.75;MQ0=98;MQRankSum=-5.699;QD=15.31;ReadPosRankSum=-1.443;VQSLOD=1.7383;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:24:35.90:0,36,1258	0/0:19,0:17:42.09:0,42,1579	./.	./.	0/0:29,0:27:69.20:0,69,3287	1/1:5,17:17:27.09:383,27,0	1/1:7,18:19:15.05:454,15,0	0/0:68,0:28:84.17:0,84,2703	0/0:53,0:50:99:0,108,4796	0/0:78,0:62:99:0,178,9161	0/0:34,0:31:69.24:0,69,3682	0/0:53,0:45:90.14:0,90,3476	0/0:70,0:60:99:0,123,5767	0/0:59,0:51:99:0,117,5293	0/0:65,0:62:99:0,123,6082	0/0:58,0:51:99:0,102,4864	0/0:16,0:12:27.08:0,27,1242	0/0:31,0:25:48.16:0,48,1952	0/0:16,0:13:30.09:0,30,1547	0/0:49,0:45:99:0,108,5482	0/0:51,0:43:96.30:0,96,4744	0/0:53,0:46:99:0,102,5488	0/0:39,0:29:81.24:0,81,3771	0/0:18,0:17:39.06:0,39,1585	0/0:43,0:34:73.14:0,73,4742	0/0:74,0:60:99:0,166,8368	0/0:36,0:30:60.19:0,60,2809	0/0:30,0:27:72.18:0,72,3759
chr10	19995679	.	G	GTGTA	1509.27	PASS	AC=2;AF=0.037;AN=54;BaseQRankSum=-5.007;DP=999;FS=0.758;HRun=0;HaplotypeScore=156.0089;InbreedingCoeff=0.8406;MQ=50.60;MQ0=45;MQRankSum=0.618;QD=33.54;ReadPosRankSum=1.818;VQSLOD=3.8837;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:43.46:0,43,685	0/0:17,0:16:38.71:0,39,658	./.	0/0:14,0:1:2.98:0,3,21	0/0:45,0:44:99:0,99,1454	0/0:19,0:18:48.11:0,48,708	0/0:25,0:23:50.84:0,51,727	0/0:48,0:46:87.14:0,87,1166	1/1:10,34:44:66.23:1604,66,0	0/0:68,0:60:99:0,138,2066	0/0:30,0:28:53.97:0,54,884	0/0:45,0:43:90.23:0,90,1368	0/0:57,0:49:99:0,102,1597	0/0:43,0:40:84.25:0,84,1297	0/0:46,0:45:99:0,99,1460	0/0:47,1:43:20.06:0,20,1276	0/0:22,0:18:39.10:0,39,570	0/0:31,0:27:26.16:0,26,664	0/0:11,0:9:18.03:0,18,268	0/0:40,0:38:87.21:0,87,1318	0/0:50,0:47:99:0,108,1586	0/0:40,0:38:78.21:0,78,1180	0/0:38,0:35:86.47:0,86,1300	0/0:28,0:28:57.17:0,57,896	0/0:28,0:25:54.13:0,54,788	0/0:54,0:49:99:0,102,1662	0/0:35,0:29:60.17:0,60,932	0/0:17,0:15:36.10:0,36,558
chr10	19996745	.	ATTTT	A	4472.32	PASS	AB=0.630;AC=32;AF=0.571;AN=56;BaseQRankSum=3.565;DP=550;FS=13.309;HRun=18;HaplotypeScore=104.7780;InbreedingCoeff=0.7108;MQ=70.60;MQ0=4;MQRankSum=-3.608;QD=12.39;ReadPosRankSum=6.973;VQSLOD=-0.3647;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:25:25.67:0,26,260	0/0:10,0:18:34.74:0,35,279	0/0:19,0:10:0.46:0,0,9	0/0:19,0:15:33.09:0,33,491	0/1:13,1:27:2.66:3,0,254	1/1:4,1:13:17.72:152,18,0	1/1:6,0:26:41.31:334,41,0	1/1:9,0:27:50.31:390,50,0	0/0:10,0:14:25.23:0,25,419	1/1:11,9:23:35.29:392,35,0	0/1:8,14:22:7.11:197,0,7	1/1:10,7:20:16.73:175,17,0	1/1:10,11:23:20.10:228,20,0	1/1:9,10:20:6.25:291,6,0	0/0:13,0:15:36.11:0,36,644	1/1:5,9:18:27.41:288,27,0	1/1:4,9:13:23.75:292,24,0	1/1:5,9:15:17.70:205,18,0	1/1:10,10:20:32.53:359,33,0	0/1:4,10:16:27.54:266,0,28	1/1:9,12:21:16.32:217,16,0	1/1:5,8:13:14.47:179,14,0	1/1:8,17:24:10.30:309,10,0	0/1:10,9:19:0.79:199,0,1	0/0:7,0:22:34.57:0,35,241	0/0:10,1:27:17.49:0,17,348	0/0:10,0:19:43.85:0,44,387	0/0:3,0:9:13.88:0,14,138
chr10	20001479	.	TA	T	9370.44	PASS	AB=0.519;AC=21;AF=0.375;AN=56;BaseQRankSum=15.219;DP=716;FS=2.032;HRun=1;HaplotypeScore=78.2309;InbreedingCoeff=0.9201;MQ=93.91;MQ0=0;MQRankSum=-8.991;QD=36.60;ReadPosRankSum=3.180;VQSLOD=5.4280;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,41:41:99:1467,105,0	1/1:0,5:5:9.03:126,9,0	0/0:33,0:33:99:0,99,1509	0/0:29,0:29:85.82:0,86,1297	1/1:0,24:24:60.09:786,60,0	1/1:0,23:23:66.22:922,66,0	1/1:0,17:17:45.15:629,45,0	1/1:0,29:29:84.23:1106,84,0	1/1:0,17:17:48.16:671,48,0	0/0:34,0:34:99:0,102,1582	0/0:18,0:18:54.18:0,54,862	0/0:25,0:25:75.24:0,75,1172	0/0:26,0:26:78.24:0,78,1199	0/0:22,0:22:66.18:0,66,1004	0/0:31,0:31:93.30:0,93,1461	0/0:22,0:22:66.19:0,66,1005	0/0:29,0:29:84.24:0,84,1291	0/0:23,0:23:60.18:0,60,930	0/0:29,0:29:87.27:0,87,1345	0/0:27,0:27:81.25:0,81,1244	0/0:39,0:39:99:0,117,1869	0/0:26,0:26:75.26:0,75,1193	0/0:17,0:17:51.16:0,51,789	0/0:30,0:30:90.29:0,90,1403	1/1:0,33:33:90.30:1257,90,0	0/1:2,26:28:11.65:982,0,12	1/1:0,25:25:69.23:964,69,0	1/1:0,14:14:33.11:461,33,0
chr10	20002151	.	G	GTC	3820.90	PASS	AB=0.739;AC=23;AF=0.411;AN=56;BaseQRankSum=-6.284;DP=616;FS=46.187;HRun=0;HaplotypeScore=112.7231;InbreedingCoeff=0.3883;MQ=47.89;MQ0=58;MQRankSum=1.536;QD=10.16;ReadPosRankSum=3.689;VQSLOD=1.5686;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:25:21.43:0,21,245	0/0:10,0:10:6.02:0,6,77	0/0:3,0:1:3.01:0,3,43	0/0:16,0:10:8.72:0,9,98	0/0:9,0:9:12.02:0,12,124	0/0:25,0:20:21.93:0,22,254	0/1:23,0:20:3.35:3,0,113	0/0:36,0:33:89.18:0,89,863	0/0:13,0:13:4.93:0,5,64	0/1:9,15:20:68.95:738,0,69	1/1:6,12:13:3.01:55,3,0	1/1:11,19:26:23.58:352,24,0	1/1:9,16:21:9.01:133,9,0	1/1:16,14:27:17.94:329,18,0	0/0:35,0:34:85.82:0,86,1185	1/1:11,24:29:18.04:296,18,0	0/1:10,15:19:27.43:205,0,27	0/1:4,17:18:17.80:315,0,18	1/1:11,12:16:29.87:560,30,0	0/1:11,6:15:7.85:187,0,8	0/0:16,13:18:4.92:0,5,84	1/1:4,13:14:6.02:110,6,0	1/1:6,20:22:12.04:204,12,0	0/1:16,20:27:3.61:308,0,4	0/0:11,0:10:6.02:0,6,86	0/1:25,0:21:24.99:25,0,444	0/0:13,0:12:26.43:0,26,286	0/0:12,0:11:33.10:0,33,421
chr10	20002153	.	CTG	C	2411.17	PASS	AB=0.898;AC=23;AF=0.411;AN=56;BaseQRankSum=-2.589;DP=608;FS=45.266;HRun=0;HaplotypeScore=113.0056;InbreedingCoeff=0.2310;MQ=47.56;MQ0=60;MQRankSum=1.363;QD=6.20;ReadPosRankSum=4.050;VQSLOD=1.5067;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,2:25:21.96:0,22,183	0/0:10,0:10:5.98:0,6,63	0/0:3,0:1:3.01:0,3,43	0/0:15,0:9:8.71:0,9,98	0/0:6,2:8:7.61:0,8,50	0/0:21,2:19:20.14:0,20,140	0/1:22,1:21:21.49:21,0,113	0/0:33,1:31:72.43:0,72,755	0/0:11,0:11:5.65:0,6,65	0/1:19,5:20:99:493,0,113	1/1:16,2:13:2.90:31,3,0	1/1:21,8:25:24.03:246,24,0	1/1:19,5:20:9.02:96,9,0	1/1:18,11:26:18.04:181,18,0	0/0:33,0:32:84.72:0,85,1531	1/1:26,8:28:17.83:189,18,0	0/1:22,3:19:43.06:106,0,43	0/1:18,3:18:30.74:247,0,31	0/1:21,3:17:7.54:354,0,8	0/1:14,3:15:39.51:142,0,40	0/0:27,4:18:9.03:0,9,168	1/1:16,2:15:6.01:60,6,0	1/1:21,5:22:12.04:159,12,0	0/1:37,0:27:23.64:160,0,24	0/0:10,1:10:6.02:0,6,86	0/1:22,3:21:99:106,0,210	0/1:13,1:12:0.59:1,0,99	0/0:12,0:11:31.07:0,31,202
chr10	20002161	.	CTG	C	369.68	PASS	AB=0.948;AC=12;AF=0.231;AN=52;BaseQRankSum=4.279;DP=563;FS=12.454;HRun=0;HaplotypeScore=117.2822;InbreedingCoeff=0.3173;MQ=41.50;MQ0=65;MQRankSum=-6.622;QD=1.98;ReadPosRankSum=-4.174;VQSLOD=0.1161;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:22:17.70:0,18,153	0/0:10,0:10:5.74:0,6,37	./.	./.	0/0:9,0:8:11.74:0,12,73	1/1:24,0:19:14.82:115,15,0	1/1:21,3:21:0.72:21,1,0	1/1:29,4:30:41.99:259,42,0	1/1:10,0:10:0.89:2,1,0	0/0:24,0:20:4.31:0,4,787	0/0:17,1:13:3.01:0,3,57	0/1:24,1:21:26.05:26,0,247	0/1:18,2:16:50.61:51,0,101	0/0:26,1:24:17.92:0,18,342	0/0:32,0:31:78.71:0,79,1447	0/1:30,1:25:17.92:18,0,221	0/0:25,0:18:15.05:0,15,286	0/1:19,1:16:22.20:22,0,323	0/0:23,0:17:43.73:0,44,563	0/0:16,0:14:12.04:0,12,218	0/0:31,1:19:9.03:0,9,170	0/0:16,0:13:6.02:0,6,114	0/0:21,0:17:12.04:0,12,196	0/0:34,0:22:21.07:0,21,399	0/0:12,1:12:5.99:0,6,48	0/0:24,0:20:30.27:0,30,353	0/0:13,0:11:22.31:0,22,135	0/0:12,0:11:32.34:0,32,237
chr10	20002163	.	GTCTGTCTGTCTCTCTCTCTCTCTCTC	G	2302.51	PASS	AB=1.000;AC=22;AF=0.423;AN=52;BaseQRankSum=-0.593;DP=573;FS=38.589;HRun=0;HaplotypeScore=230.7830;InbreedingCoeff=0.0869;MQ=40.88;MQ0=64;MQRankSum=-2.726;QD=6.96;ReadPosRankSum=-3.747;VQSLOD=0.7886;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:23:99:180,0,147	1/1:0,8:9:3.01:31,3,0	./.	./.	1/1:10,0:9:12.03:173,12,0	0/1:24,0:19:24.13:24,0,255	0/1:25,0:21:17.23:17,0,49	0/1:37,0:34:99:107,0,348	1/1:2,0:10:3.01:69,3,0	0/1:24,0:20:10.49:10,0,1537	0/0:18,0:13:3.48:0,3,50	0/1:25,0:21:87.21:87,0,443	0/1:21,0:17:13.93:14,0,188	0/0:29,0:26:11.94:0,12,531	0/0:34,0:32:70.47:0,70,4115	0/1:29,0:23:30.50:31,0,423	0/0:24,0:18:16.30:0,16,671	0/1:22,0:18:12.41:12,0,729	0/1:22,0:17:20.10:20,0,562	0/0:16,0:14:11.99:0,12,379	0/0:32,0:19:9.03:0,9,543	0/0:16,0:13:6.02:0,6,100	0/0:22,0:18:12.02:0,12,243	0/0:37,0:25:22.32:0,22,740	0/0:3,8:10:0.89:0,1,2	1/1:24,0:20:54.06:843,54,0	1/1:12,0:10:24.08:408,24,0	1/1:12,0:11:30.08:445,30,0
chr10	20002165	.	CTG	C	941.90	PASS	AB=0.949;AC=18;AF=0.360;AN=50;BaseQRankSum=0.653;DP=572;FS=15.748;HRun=0;HaplotypeScore=117.2757;InbreedingCoeff=0.6330;MQ=40.81;MQ0=63;MQRankSum=-1.791;QD=4.98;ReadPosRankSum=-3.051;VQSLOD=1.3681;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:23,2:23:28.29:83,0,28	1/1:9,0:9:2.92:17,3,0	./.	./.	1/1:10,0:9:11.98:99,12,0	1/1:23,2:20:14.41:114,14,0	1/1:24,0:20:5.32:33,5,0	0/1:35,1:33:22.12:70,0,22	1/1:9,0:9:2.50:9,2,0	0/0:24,0:20:55.07:0,55,903	0/0:17,0:12:3.01:0,3,57	0/0:23,0:20:17.17:0,17,348	0/0:22,0:18:4.30:0,4,129	0/0:29,0:26:17.92:0,18,344	0/0:33,0:31:78.72:0,79,1439	0/0:30,0:24:20.57:0,21,296	0/0:24,0:18:15.05:0,15,288	0/0:22,0:18:17.35:0,17,441	0/0:22,0:17:45.03:0,45,545	0/0:18,0:16:12.04:0,12,221	0/0:32,0:19:9.03:0,9,149	0/0:15,0:13:6.02:0,6,115	0/0:22,0:18:12.04:0,12,174	0/0:37,0:25:24.08:0,24,439	./.	1/1:23,1:20:40.84:329,41,0	1/1:14,1:12:9.42:153,9,0	1/1:12,0:11:26.90:211,27,0
chr10	20002171	.	GTCTCTCTC	G	1247.87	PASS	AB=0.967;AC=18;AF=0.429;AN=42;BaseQRankSum=3.496;DP=559;FS=10.863;HRun=0;HaplotypeScore=155.9118;InbreedingCoeff=0.2248;MQ=39.98;MQ0=55;MQRankSum=-0.005;QD=4.50;ReadPosRankSum=2.151;VQSLOD=1.8450;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:25:2.70:0,3,50	./.	./.	./.	./.	0/0:28,0:23:6.74:0,7,59	0/0:27,0:23:4.10:0,4,20	0/0:29,0:26:28.91:0,29,310	0/1:14,0:14:25.57:26,0,43	0/1:23,2:21:21.82:282,0,22	0/1:20,0:15:0.01:0,0,0	1/1:18,3:18:11.40:163,11,0	1/1:20,2:18:8.89:112,9,0	1/1:22,6:26:1.65:54,2,0	0/0:33,0:32:31.38:0,31,720	1/1:23,2:22:6.02:86,6,0	0/1:21,2:18:50.39:50,0,75	1/1:20,0:19:9.85:297,10,0	1/1:14,1:14:6.02:142,6,0	0/0:18,1:18:2.81:0,3,76	0/0:29,0:19:3.01:0,3,75	./.	./.	0/1:37,0:25:3.48:150,0,3	0/0:13,0:12:0:0,0,0	0/1:23,0:18:22.37:22,0,47	0/0:15,0:12:6.02:0,6,73	./.
chr10	20002199	.	CTCTCTCTCTCTCTG	C	4962.71	PASS	AB=0.959;AC=24;AF=0.500;AN=48;BaseQRankSum=-2.765;DP=554;FS=0.000;HRun=0;HaplotypeScore=184.0148;InbreedingCoeff=0.1940;MQ=38.12;MQ0=54;MQRankSum=4.594;QD=13.34;ReadPosRankSum=0.759;VQSLOD=3.0785;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:19:3.29:0,3,87	0/0:11,0:10:5.95:0,6,75	./.	./.	./.	0/0:20,0:16:16.82:0,17,203	0/0:33,0:29:25.37:0,25,181	0/0:30,0:30:73.43:0,73,841	0/1:20,0:18:51.12:51,0,196	0/1:15,0:14:99:490,0,109	0/1:21,0:17:3.37:206,0,3	1/1:23,0:20:27.97:504,28,0	1/1:23,1:19:23.90:301,24,0	1/1:31,0:29:28.76:496,29,0	0/0:34,0:32:64.44:0,64,1778	1/1:24,0:22:28.50:470,28,0	0/1:21,0:15:99:267,0,100	0/1:20,0:17:18.56:582,0,19	1/1:17,0:16:27.84:401,28,0	0/1:7,16:22:27.34:27,0,105	0/1:26,0:15:18.04:18,0,116	1/1:17,0:16:32.98:373,33,0	1/1:19,0:18:24.44:243,24,0	0/1:38,0:25:35.74:501,0,36	0/1:14,0:13:0:0,0,0	0/1:19,0:14:31.52:32,0,349	0/0:11,0:6:9.03:0,9,234	./.
chr10	20002203	.	CTCTCTCTCTG	C	4219.24	PASS	AB=0.970;AC=26;AF=0.520;AN=50;BaseQRankSum=-1.705;DP=534;FS=0.000;HRun=0;HaplotypeScore=163.8139;InbreedingCoeff=0.3299;MQ=38.97;MQ0=45;MQRankSum=4.130;QD=11.85;ReadPosRankSum=1.147;VQSLOD=3.3785;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:20:2.73:0,3,51	0/0:11,0:10:5.95:0,6,54	0/0:6,0:2:3:0,3,27	./.	./.	0/0:19,0:15:15.37:0,15,176	0/0:31,0:30:21.09:0,21,159	0/0:27,0:27:65.12:0,65,559	0/1:21,0:19:16.57:17,0,164	0/1:9,2:11:45.52:405,0,46	0/1:21,0:17:24.37:143,0,24	1/1:18,5:20:33.87:433,34,0	1/1:21,2:19:29.69:288,30,0	1/1:29,3:31:34.78:409,35,0	0/0:33,0:31:46.71:0,47,1181	1/1:23,3:24:38.94:460,39,0	0/1:19,1:14:58.85:189,0,59	1/1:18,0:16:30.85:484,31,0	1/1:18,0:17:30.90:356,31,0	0/1:22,1:22:23.10:23,0,72	0/1:20,0:10:18.04:18,0,86	1/1:17,0:16:32.97:338,33,0	1/1:17,0:17:27.32:243,27,0	1/1:36,0:25:2:410,2,0	0/1:12,0:12:0:0,0,0	0/1:18,0:14:2.57:3,0,265	0/0:10,0:6:9.03:0,9,183	./.
chr10	20002211	.	CTG	C	2876.17	PASS	AB=1.000;AC=27;AF=0.482;AN=56;BaseQRankSum=-2.933;DP=606;FS=9.445;HRun=0;HaplotypeScore=128.8893;InbreedingCoeff=0.7600;MQ=39.66;MQ0=43;MQRankSum=4.383;QD=8.93;ReadPosRankSum=2.002;VQSLOD=3.0749;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:22:2.99:0,3,24	0/0:15,0:14:8.82:0,9,54	0/0:14,0:7:8.75:0,9,68	0/0:9,0:2:6.01:0,6,62	0/0:17,0:12:5.99:0,6,49	0/0:22,0:18:18.45:0,18,166	0/0:34,0:33:33.18:0,33,265	0/0:28,0:27:38.39:0,38,263	0/0:25,0:22:14.64:0,15,90	1/1:19,0:19:14.90:307,15,0	0/1:21,0:19:18.20:163,0,18	1/1:20,1:18:32.37:260,32,0	1/1:25,0:21:29.65:223,30,0	1/1:31,2:33:41.23:313,41,0	0/0:29,0:27:8.60:0,9,314	1/1:28,0:26:47.84:392,48,0	1/1:19,1:14:17.89:133,18,0	1/1:18,1:17:18.21:195,18,0	1/1:22,0:20:29.93:248,30,0	1/1:23,0:22:5.68:42,6,0	1/1:20,0:12:5.99:49,6,0	1/1:16,0:17:35.94:290,36,0	1/1:18,0:18:26.88:217,27,0	1/1:33,2:23:10.99:251,11,0	0/0:17,0:17:2.87:0,3,25	0/0:25,0:21:40.21:0,40,281	0/0:20,0:14:20.77:0,21,163	0/0:3,0:2:2.97:0,3,20
chr10	20003819	.	T	TTGTG	9523.56	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=12.634;DP=742;FS=0.979;HRun=0;HaplotypeScore=149.4445;InbreedingCoeff=0.9975;MQ=83.17;MQ0=3;MQRankSum=-6.042;QD=36.21;ReadPosRankSum=1.342;VQSLOD=5.1708;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:45,0:45:99:1549,114,0	1/1:8,0:8:24.08:327,24,0	0/0:30,0:30:62.48:0,62,926	0/0:17,0:16:15.42:0,15,480	1/1:22,0:22:36.03:460,36,0	1/1:20,0:20:36.12:674,36,0	1/1:34,0:34:75.26:1309,75,0	1/1:1,22:26:75.18:1614,75,0	1/1:22,0:20:48.10:639,48,0	0/0:25,0:25:57.14:0,57,881	0/0:23,0:23:63.19:0,63,1070	0/0:26,0:26:72.23:0,72,1304	0/0:38,0:38:99:0,108,1917	0/0:26,0:26:72.25:0,72,1309	0/0:32,0:32:81.23:0,81,1384	0/0:34,0:34:90.29:0,90,1594	0/0:32,0:32:90.21:0,90,1488	0/0:23,0:23:66.17:0,66,1164	0/0:20,0:20:57.12:0,57,970	0/0:26,0:26:69.15:0,69,1162	0/0:52,0:52:99:0,135,2268	0/0:22,0:22:54.01:0,54,916	0/0:19,0:19:54.16:0,54,911	0/0:34,0:34:96.27:0,96,1595	1/1:15,0:15:36.12:490,36,0	1/1:37,0:38:99:1360,102,0	1/1:20,1:20:48:693,48,0	1/1:12,0:11:30.10:409,30,0
chr10	20003823	.	G	GTGT	12140.94	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=10.062;DP=742;FS=4.579;HRun=0;HaplotypeScore=121.5642;InbreedingCoeff=0.9233;MQ=82.81;MQ0=3;MQRankSum=-7.194;QD=45.13;ReadPosRankSum=4.009;VQSLOD=6.4026;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,45:46:99:2620,114,0	1/1:0,11:11:24.08:559,24,0	0/0:29,0:29:82.13:0,82,1276	0/0:17,0:16:41.64:0,42,666	1/1:0,20:23:36.12:807,36,0	1/1:1,0:19:33.11:509,33,0	1/1:0,0:32:72.24:1059,72,0	0/1:27,0:27:99:635,0,109	1/1:1,18:20:48.16:1096,48,0	0/0:23,0:23:63.21:0,63,1136	0/0:24,0:24:72.20:0,72,1207	0/0:24,0:24:72.25:0,72,1333	0/0:39,0:39:99:0,111,2023	0/0:29,0:29:84.25:0,84,1435	0/0:29,0:29:87.27:0,87,1512	0/0:32,0:32:93.30:0,93,1663	0/0:32,0:32:93.24:0,93,1580	0/0:22,0:22:66.18:0,66,1193	0/0:22,0:22:63.18:0,63,1066	0/0:24,0:24:69.17:0,69,1197	0/0:49,0:49:99:0,144,2514	0/0:22,0:22:62.82:0,63,1053	0/0:22,0:22:64.39:0,64,1065	0/0:34,0:34:99:0,99,1759	1/1:0,13:15:36.12:837,36,0	1/1:2,35:41:99:2228,108,0	1/1:1,19:22:48:1091,48,0	1/1:1,10:10:30.10:699,30,0
chr10	20004622	.	G	GA	4794.03	PASS	AB=0.986;AC=37;AF=0.661;AN=56;BaseQRankSum=-6.221;DP=607;FS=6.422;HRun=13;HaplotypeScore=116.3815;InbreedingCoeff=0.4895;MQ=70.61;MQ0=5;MQRankSum=-0.026;QD=10.33;ReadPosRankSum=-1.135;VQSLOD=3.5557;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:23:17.42:17,0,119	0/1:10,0:10:8.63:24,0,9	0/0:32,0:17:11.53:0,12,61	0/1:23,1:15:9.18:33,0,9	0/1:29,0:30:78.58:79,0,100	0/0:16,0:16:11.01:0,11,42	0/0:21,0:21:7.13:0,7,23	1/1:23,3:35:47.45:360,47,0	1/1:8,0:8:5.55:26,6,0	1/1:10,20:31:42.44:486,42,0	1/1:4,19:24:56.55:474,57,0	1/1:2,16:19:26.90:237,27,0	1/1:7,13:22:9.10:178,9,0	1/1:6,15:23:26.71:224,27,0	0/0:15,0:16:11.09:0,11,187	1/1:6,18:25:6.81:336,7,0	1/1:10,19:32:7.89:394,8,0	1/1:4,15:21:21.51:290,22,0	1/1:9,10:19:18.30:273,18,0	1/1:5,14:19:20.84:292,21,0	1/1:6,4:10:23.97:211,24,0	1/1:6,17:25:16.11:349,16,0	1/1:7,15:21:11.82:271,12,0	1/1:2,12:14:24.03:223,24,0	0/0:17,0:18:0.81:0,1,110	0/0:24,0:24:33.28:0,33,178	0/1:28,0:28:16.95:17,0,127	0/0:11,0:11:14.13:0,14,80
chr10	20004634	.	AAC	A	469.15	PASS	AB=0.963;AC=11;AF=0.196;AN=56;BaseQRankSum=5.384;DP=654;FS=1.928;HRun=0;HaplotypeScore=145.7653;InbreedingCoeff=-0.0379;MQ=71.91;MQ0=5;MQRankSum=-3.066;QD=1.68;ReadPosRankSum=-4.750;VQSLOD=0.2624;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:26,1:27:14.05:14,0,159	0/0:9,0:9:3.25:0,3,68	0/1:43,0:22:16.35:16,0,200	0/0:33,0:21:27.34:0,27,246	0/1:31,2:33:99:111,0,135	0/1:20,1:21:16.07:75,0,16	1/1:19,1:20:22.27:143,22,0	0/1:44,0:44:99:108,0,105	0/0:9,0:9:4.21:0,4,31	0/0:33,0:33:96.16:0,96,1085	0/0:24,0:24:68.53:0,69,780	0/0:19,0:19:33.09:0,33,398	0/0:20,0:20:39.07:0,39,460	0/0:19,0:19:33.09:0,33,393	0/0:17,0:17:51.05:0,51,738	0/0:25,0:25:60.16:0,60,750	0/0:30,0:30:75.84:0,76,875	0/0:20,0:20:45.08:0,45,519	0/0:25,0:25:66.18:0,66,674	0/0:20,0:20:53.83:0,54,567	0/0:11,0:11:30:0,30,348	0/0:26,0:26:78.09:0,78,887	0/0:21,0:21:45.92:0,46,542	0/0:13,0:13:27.07:0,27,326	0/1:19,1:20:24.34:24,0,116	0/1:25,1:26:53.99:54,0,148	0/1:33,1:34:34.50:34,0,140	0/1:10,1:11:41.18:41,0,95
chr10	20004635	.	AC	A	2555.79	PASS	AB=0.967;AC=23;AF=0.411;AN=56;BaseQRankSum=9.779;DP=652;FS=0.698;HRun=2;HaplotypeScore=129.4694;InbreedingCoeff=0.8352;MQ=71.95;MQ0=5;MQRankSum=-8.286;QD=7.74;ReadPosRankSum=-2.129;VQSLOD=0.2037;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:27:44.32:201,44,0	1/1:9,0:9:13.12:58,13,0	0/1:43,1:23:8.04:8,0,146	0/1:31,0:21:6.68:7,0,163	1/1:32,0:32:72.18:377,72,0	1/1:4,17:21:22.87:284,23,0	1/1:2,18:20:41.08:515,41,0	1/1:41,0:42:73.49:371,73,0	0/1:9,0:9:0.05:14,0,0	0/0:34,0:34:97.78:0,98,804	0/0:24,0:24:68.56:0,69,548	0/0:19,0:19:32.85:0,33,257	0/0:21,0:21:41.87:0,42,339	0/0:19,0:19:32.94:0,33,266	0/0:17,0:17:44.84:0,45,509	0/0:25,0:25:59.89:0,60,513	0/0:30,0:30:56.27:0,56,537	0/0:20,0:20:44.85:0,45,349	0/0:25,0:25:61.34:0,61,559	0/0:19,0:19:52.02:0,52,400	0/0:11,0:11:27.69:0,28,234	0/0:24,0:24:71.06:0,71,559	0/0:20,0:21:44.83:0,45,374	0/0:13,0:13:26.94:0,27,214	1/1:20,0:20:43.45:210,43,0	1/1:26,0:26:56.18:298,56,0	1/1:35,0:35:58.07:304,58,0	1/1:11,0:11:29.18:126,29,0
chr10	20004636	.	C	CAA	5152.37	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=7.651;DP=659;FS=0.345;HRun=13;HaplotypeScore=132.9815;InbreedingCoeff=0.9871;MQ=72.42;MQ0=5;MQRankSum=-7.663;QD=24.19;ReadPosRankSum=-1.706;VQSLOD=3.1931;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:27,1:28:59.16:624,59,0	1/1:9,0:9:15.98:190,16,0	0/0:45,0:24:39.31:0,39,432	0/0:33,0:21:37.62:0,38,391	1/1:31,0:32:74.22:815,74,0	0/0:21,0:21:22.14:0,22,77	0/0:20,0:20:26.82:0,27,80	1/1:11,30:43:73.98:1090,74,0	1/1:9,0:9:8.77:65,9,0	0/0:34,0:34:99:0,99,1205	0/0:24,0:24:63.07:0,63,742	0/0:19,0:19:25.80:0,26,380	0/0:21,0:21:40.07:0,40,450	0/0:20,0:20:32.42:0,32,379	0/0:18,0:18:51.17:0,51,789	0/0:26,0:26:54.39:0,54,772	0/0:31,0:31:65.55:0,66,898	0/0:20,0:20:44.46:0,44,514	0/0:25,0:25:66.37:0,66,851	0/0:19,0:19:53.26:0,53,560	0/0:11,0:11:28.72:0,29,351	0/0:24,0:24:70.88:0,71,789	0/0:21,0:21:48.09:0,48,594	0/0:13,0:13:27:0,27,352	1/1:20,0:20:51.08:557,51,0	1/1:26,0:26:67.26:712,67,0	1/1:34,0:35:71.06:728,71,0	1/1:11,0:11:33.09:371,33,0
chr10	20004644	.	A	AAC	7078.98	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=-0.545;DP=672;FS=1.112;HRun=0;HaplotypeScore=131.5520;InbreedingCoeff=0.9047;MQ=76.21;MQ0=5;MQRankSum=-7.272;QD=32.77;ReadPosRankSum=0.545;VQSLOD=6.6574;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,24:30:54.32:920,54,0	1/1:1,7:9:20.94:326,21,0	0/0:40,0:22:37.53:0,38,574	0/0:33,0:25:36.25:0,36,487	1/1:4,26:35:81.13:1269,81,0	0/0:19,0:19:33.08:0,33,387	0/0:21,0:21:51.13:0,51,605	0/1:39,0:40:68.14:445,0,68	1/1:1,1:10:9.03:139,9,0	0/0:38,0:38:99:0,102,1385	0/0:25,0:25:75.23:0,75,1034	0/0:17,0:17:35.90:0,36,484	0/0:22,0:22:50.94:0,51,649	0/0:27,0:27:44.98:0,45,594	0/0:21,0:21:63.14:0,63,859	0/0:25,0:25:63.16:0,63,881	0/0:32,0:32:84.13:0,84,1128	0/0:22,0:22:48.11:0,48,664	0/0:27,0:27:74.58:0,75,1004	0/0:17,0:17:45.15:0,45,640	0/0:10,0:10:30.09:0,30,415	0/0:27,0:27:76.30:0,76,954	0/0:21,0:21:48.11:0,48,666	0/0:11,0:11:27.08:0,27,381	1/1:0,17:19:48.16:875,48,0	1/1:1,23:26:70.08:1261,70,0	1/1:3,25:36:72.19:1229,72,0	1/1:0,10:11:33.11:615,33,0
chr10	20005290	.	CTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	C	2740.98	PASS	AB=1.000;AC=21;AF=0.404;AN=52;BaseQRankSum=-0.217;DP=570;FS=19.978;HRun=0;HaplotypeScore=393.0111;InbreedingCoeff=0.5730;MQ=66.81;MQ0=11;MQRankSum=0.845;QD=13.50;ReadPosRankSum=3.165;VQSLOD=0.3134;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:42:38.34:0,38,2290	0/0:11,0:11:6.02:0,6,422	0/0:25,0:18:8.99:0,9,154	0/0:34,0:24:16.86:0,17,286	0/0:19,0:18:3.48:0,3,150	0/0:18,0:17:5.17:0,5,277	0/0:24,0:22:20.81:0,21,965	0/0:33,0:33:29.60:0,30,1261	0/0:20,0:20:9.50:0,10,914	1/1:16,0:18:0.19:259,0,0	1/1:8,0:8:2.99:24,3,0	1/1:21,0:20:12.03:257,12,0	1/1:12,5:17:9.03:773,9,0	1/1:19,0:19:3.01:50,3,0	0/0:13,0:13:9.03:0,9,1126	1/1:16,8:23:12.04:1030,12,0	0/1:17,0:16:71.72:149,0,72	1/1:13,0:13:0.11:209,0,0	0/0:25,0:24:5.54:0,6,28	1/1:13,0:13:2.99:25,3,0	1/1:45,0:44:8.65:96,9,0	1/1:7,0:7:3:37,3,0	./.	./.	0/0:16,0:16:12.04:0,12,1062	0/0:29,0:29:54.19:0,54,4344	0/0:20,0:19:21.07:0,21,1632	0/0:3,0:3:6.02:0,6,429
chr10	20005675	.	AT	A	4605.36	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=10.289;DP=539;FS=2.439;HRun=10;HaplotypeScore=57.1251;InbreedingCoeff=0.9465;MQ=74.07;MQ0=0;MQRankSum=-0.786;QD=20.65;ReadPosRankSum=-0.273;VQSLOD=5.5850;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,26:27:62.97:543,63,0	1/1:0,5:5:12:104,12,0	0/0:16,0:16:42.06:0,42,430	0/0:8,0:8:19.84:0,20,138	1/1:1,14:15:41.99:365,42,0	1/1:4,20:24:56.98:495,57,0	1/1:0,19:19:44.99:391,45,0	1/1:3,32:35:95.66:793,96,0	1/1:1,19:20:33.27:422,33,0	0/0:24,0:24:66.16:0,66,720	0/0:17,0:17:39.10:0,39,423	0/0:16,1:18:31.45:0,31,454	0/0:20,1:21:37.08:0,37,612	0/0:14,0:14:42.11:0,42,465	0/0:18,0:18:48.10:0,48,508	0/0:14,1:15:16.06:0,16,405	0/0:20,0:20:60.16:0,60,664	0/0:18,0:18:45.12:0,45,498	0/0:18,0:18:4.57:0,5,391	0/0:21,0:21:60.14:0,60,648	0/0:28,0:28:66.14:0,66,704	0/0:13,0:13:36.08:0,36,389	0/0:24,0:24:63.11:0,63,674	0/0:22,0:22:54.15:0,54,597	1/1:1,17:18:35.99:313,36,0	1/1:4,21:25:2.61:478,3,0	1/1:5,21:26:56.98:495,57,0	1/1:0,9:9:24:208,24,0
chr10	20007394	.	C	CAGG	13651.02	PASS	AB=0.755;AC=42;AF=0.750;AN=56;BaseQRankSum=10.197;DP=593;FS=1.861;HRun=0;HaplotypeScore=228.4540;InbreedingCoeff=0.3839;MQ=59.02;MQ0=0;MQRankSum=-8.708;QD=26.25;ReadPosRankSum=2.428;VQSLOD=4.8235;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:18,13:33:6.15:492,0,6	1/1:3,7:11:10.21:352,10,0	0/0:18,0:17:42.86:0,43,704	0/0:26,0:26:68.17:0,68,1051	1/1:5,2:7:9.02:121,9,0	1/1:12,24:36:43.97:1170,44,0	1/1:14,14:28:71.96:912,72,0	0/1:18,6:24:99:284,0,113	1/1:7,13:20:51.14:770,51,0	0/1:11,6:17:43.92:365,0,44	1/1:5,6:11:26.45:366,26,0	1/1:15,20:40:72.91:1070,73,0	1/1:11,14:25:27.82:705,28,0	1/1:10,14:24:51.15:776,51,0	0/0:28,0:28:78.24:0,78,1273	1/1:8,14:22:40.93:746,41,0	1/1:8,7:18:29.86:341,30,0	0/1:12,5:17:15.60:299,0,16	0/1:12,5:16:38.36:273,0,38	1/1:6,17:23:59.95:860,60,0	1/1:12,9:21:30.45:402,30,0	1/1:11,12:24:46.29:676,46,0	1/1:8,5:13:25.35:338,25,0	1/1:12,7:19:16.12:395,16,0	1/1:7,12:19:50.17:682,50,0	0/1:17,10:27:44.83:515,0,45	1/1:9,15:24:14.99:742,15,0	0/0:1,0:1:2.96:0,3,19
chr10	20007397	.	C	CTGATGCGG	46756.25	PASS	AB=0.744;AC=45;AF=0.804;AN=56;BaseQRankSum=6.410;DP=691;FS=2.214;HRun=0;HaplotypeScore=268.8458;InbreedingCoeff=0.3878;MQ=54.64;MQ0=0;MQRankSum=-13.576;QD=75.78;ReadPosRankSum=7.214;VQSLOD=4.1812;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:27,13:40:19.88:2146,20,0	1/1:4,7:11:8.91:1106,9,0	0/0:21,0:20:51.73:0,52,1348	0/0:26,0:26:72.14:0,72,1882	1/1:5,2:7:6.02:235,6,0	1/1:17,23:41:84.80:3420,85,0	1/1:18,14:32:24.19:2771,24,0	1/1:27,6:32:0.91:2139,1,0	1/1:13,13:27:44.17:2351,44,0	1/1:19,6:25:62.87:2171,63,0	1/1:5,7:12:17.80:1174,18,0	1/1:23,19:43:74.03:3271,74,0	1/1:18,13:33:20.62:2957,21,0	1/1:18,14:32:25.90:2260,26,0	0/0:27,0:27:78.24:0,78,2230	1/1:11,14:25:71.75:2432,72,0	0/1:14,7:21:89.58:1065,0,90	0/1:15,5:20:41.51:1279,0,42	1/1:16,5:20:15.06:1705,15,0	1/1:8,17:25:54.79:2060,55,0	0/1:17,9:26:1.11:1277,0,1	1/1:14,11:26:17.91:1691,18,0	1/1:10,5:15:15.07:1063,15,0	0/1:18,7:25:13.79:1426,0,14	0/1:10,12:22:10.03:1672,0,10	1/1:19,10:29:46.47:2467,46,0	1/1:10,15:25:28.65:2496,29,0	1/1:1,0:1:3.01:122,3,0
chr10	20007398	.	A	AGCTGATGC	36864.50	PASS	AB=0.929;AC=47;AF=0.839;AN=56;BaseQRankSum=11.787;DP=671;FS=2.864;HRun=0;HaplotypeScore=298.0729;InbreedingCoeff=0.5134;MQ=54.61;MQ0=0;MQRankSum=-13.192;QD=61.65;ReadPosRankSum=8.425;VQSLOD=4.1431;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:40,0:40:9.92:1576,0,10	1/1:11,0:11:20.90:874,21,0	0/0:20,0:20:51.64:0,52,1247	0/0:26,0:26:65.05:0,65,1563	1/1:2,0:6:6.02:199,6,0	1/1:40,0:40:36.48:2730,36,0	1/1:29,0:29:65.17:2387,65,0	1/1:32,0:31:7.01:1512,7,0	1/1:26,0:26:27.24:1735,27,0	1/1:23,0:23:26.61:1585,27,0	1/1:12,0:12:19.64:851,20,0	1/1:43,0:43:70.37:2700,70,0	1/1:33,0:33:67.84:2402,68,0	0/1:24,1:33:20.83:1704,0,21	0/0:27,0:27:75.24:0,75,2063	1/1:25,0:25:47.15:1908,47,0	1/1:22,0:22:13.79:904,14,0	1/1:20,0:20:48.04:1167,48,0	1/1:20,0:19:13.08:1129,13,0	1/1:22,0:22:25.86:1617,26,0	1/1:25,0:25:39.86:1263,40,0	1/1:23,0:23:25.04:1372,25,0	0/1:12,0:12:11.80:752,0,12	1/1:24,0:24:2.94:1112,3,0	1/1:23,0:23:22.03:1299,22,0	1/1:28,0:28:47.42:1934,47,0	1/1:25,0:25:69.08:2054,69,0	1/1:1,0:1:3.01:99,3,0
chr10	20009270	.	T	TG	2786.98	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=16.157;DP=592;FS=26.001;HRun=1;HaplotypeScore=93.8235;InbreedingCoeff=0.8982;MQ=59.19;MQ0=37;MQRankSum=-9.464;QD=12.73;ReadPosRankSum=-1.333;VQSLOD=0.8513;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,117,1615	0/0:20,0:20:57.19:0,57,796	0/0:32,0:12:32.26:0,32,379	0/0:33,0:10:27.09:0,27,374	0/0:29,0:29:84.28:0,84,1174	1/1:6,6:11:28.93:210,29,0	1/1:5,4:3:5.98:54,6,0	0/0:10,8:1:3.01:0,3,42	0/0:37,0:37:99:0,108,1509	1/1:12,8:16:46.06:334,46,0	1/1:6,6:12:31.06:240,31,0	1/1:7,16:21:54.18:359,54,0	1/1:9,11:17:11.96:185,12,0	1/1:3,13:12:31.02:202,31,0	0/0:50,0:50:99:0,141,1972	1/1:7,12:17:49.11:378,49,0	1/1:2,3:5:8.39:40,8,0	1/1:3,1:3:2.92:17,3,0	1/1:5,1:4:8.85:72,9,0	1/1:5,17:19:47.67:275,48,0	1/1:12,1:9:20.47:130,20,0	1/1:10,11:18:51.54:366,52,0	1/1:7,5:12:19.02:113,19,0	1/1:3,2:5:5.77:33,6,0	0/0:27,0:27:81.25:0,81,1112	0/0:40,0:40:99:0,114,1565	0/0:29,0:27:69.20:0,69,930	0/0:16,0:16:48.16:0,48,671
chr10	20009272	.	TC	T	2435.82	PASS	AB=0.704;AC=33;AF=0.589;AN=56;BaseQRankSum=15.290;DP=617;FS=28.500;HRun=1;HaplotypeScore=96.6771;InbreedingCoeff=0.8837;MQ=58.98;MQ0=37;MQRankSum=-8.534;QD=9.70;ReadPosRankSum=-0.743;VQSLOD=-0.2565;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,126,1978	0/0:21,0:21:60.19:0,60,936	0/0:32,0:12:36.08:0,36,512	0/0:35,0:11:33.10:0,33,494	0/0:31,0:31:90.31:0,90,1417	1/1:6,6:11:25.75:151,26,0	1/1:4,5:3:5.88:49,6,0	0/1:11,8:2:16.91:17,0,42	0/0:37,0:37:99:0,108,1704	1/1:13,8:16:41.10:239,41,0	1/1:6,6:12:25.93:175,26,0	1/1:9,16:23:52.04:325,52,0	1/1:11,11:20:33.17:263,33,0	1/1:4,13:12:25.52:136,26,0	0/0:50,0:50:99:0,141,2254	1/1:8,12:18:46.56:323,47,0	1/1:3,3:6:12.64:65,13,0	1/1:3,1:3:8.64:55,9,0	1/1:5,1:4:8.34:54,8,0	1/1:6,17:20:44.34:220,44,0	1/1:13,1:9:18.80:88,19,0	1/1:11,11:18:44.72:261,45,0	1/1:7,5:12:20.67:137,21,0	1/1:5,2:7:11.08:100,11,0	0/0:29,0:29:87.28:0,87,1358	0/0:41,0:41:99:0,117,1851	0/0:30,0:28:72.12:0,72,1115	0/0:16,0:16:48.16:0,48,767
chr10	20011082	.	G	GA	11960.88	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-2.860;DP=612;FS=2.280;HRun=6;HaplotypeScore=65.6499;InbreedingCoeff=0.9858;MQ=86.55;MQ0=0;MQRankSum=-1.936;QD=31.48;ReadPosRankSum=1.107;VQSLOD=5.3840;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,102,1039	0/0:14,0:14:39.09:0,39,398	0/0:19,0:19:45.07:0,45,453	0/0:20,0:20:37.24:0,37,458	0/0:28,0:28:78.18:0,78,796	1/1:0,21:21:54.17:679,54,0	1/1:1,18:19:48.15:604,48,0	1/1:5,19:24:54.09:611,54,0	1/1:2,18:20:48.15:604,48,0	1/1:0,23:23:66.20:818,66,0	1/1:2,12:14:33.11:415,33,0	1/1:3,24:27:69.22:868,69,0	1/1:1,27:28:81.26:1019,81,0	1/1:2,20:22:54.17:679,54,0	0/0:34,0:34:93.19:0,93,942	1/1:2,28:30:81.26:1019,81,0	1/1:2,14:16:36.12:453,36,0	1/1:4,15:18:45.14:566,45,0	1/1:3,16:18:48.13:579,48,0	1/1:6,24:30:75.15:900,75,0	1/1:1,19:20:57.18:717,57,0	1/1:1,19:20:51.16:642,51,0	1/1:2,10:13:27.09:336,27,0	1/1:0,15:15:36.12:453,36,0	0/0:13,0:13:36.08:0,36,367	0/0:30,2:32:8.71:0,9,720	0/0:31,0:31:81.18:0,81,826	0/0:4,0:4:12.03:0,12,122
chr10	20012181	.	CG	C	17340.55	PASS	AB=1.000;AC=52;AF=0.929;AN=56;BaseQRankSum=4.538;DP=774;FS=8.106;HRun=1;HaplotypeScore=147.8361;InbreedingCoeff=-0.0795;MQ=82.61;MQ0=0;MQRankSum=-2.696;QD=22.40;ReadPosRankSum=8.224;VQSLOD=4.0601;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:49,0:49:99:610,101,0	0/1:9,0:9:21.48:66,0,21	0/1:21,0:20:82.81:83,0,113	0/1:22,0:22:47.86:187,0,48	1/1:20,0:20:47.89:250,48,0	1/1:24,0:24:57.01:300,57,0	1/1:30,0:30:51.64:336,52,0	0/1:23,0:23:42.26:205,0,42	1/1:23,0:23:37.96:303,38,0	1/1:1,31:32:90.28:1083,90,0	1/1:16,0:16:44.94:486,45,0	1/1:33,0:33:87.27:1043,87,0	1/1:23,0:23:60.18:719,60,0	1/1:31,0:31:81.25:970,81,0	1/1:30,0:30:46.10:381,46,0	1/1:35,0:35:90.28:1078,90,0	1/1:52,0:52:99:1761,147,0	1/1:40,0:40:99:1293,108,0	1/1:23,0:23:60.17:708,60,0	1/1:20,0:20:51.16:611,51,0	1/1:48,0:48:99:1509,126,0	1/1:25,0:25:63.19:754,63,0	1/1:17,0:17:32.74:395,33,0	1/1:35,0:35:87.27:1043,87,0	1/1:27,0:27:71.25:373,71,0	1/1:28,0:28:53.78:373,54,0	1/1:26,0:26:8.34:247,8,0	1/1:12,0:12:31.65:172,32,0
chr10	20020258	.	C	CAAA	9430.03	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-2.086;DP=602;FS=5.154;HRun=10;HaplotypeScore=92.4628;InbreedingCoeff=0.9897;MQ=63.82;MQ0=0;MQRankSum=-4.106;QD=26.41;ReadPosRankSum=-0.602;VQSLOD=3.7051;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:34:85.07:0,85,1025	0/0:10,0:11:25.40:0,25,313	0/0:11,0:9:21.05:0,21,249	0/0:12,0:10:14.52:0,15,110	0/0:22,0:23:57.06:0,57,667	1/1:2,10:15:30.06:507,30,0	1/1:1,14:18:31.33:544,31,0	1/1:13,0:31:28.01:104,28,0	0/0:24,0:25:46.39:0,46,575	1/1:5,15:25:54.11:867,54,0	1/1:2,17:22:56.88:750,57,0	1/1:6,11:20:19.59:295,20,0	1/1:7,17:24:15.52:289,16,0	1/1:6,18:24:36.56:606,37,0	0/0:31,0:31:17.53:0,18,780	1/1:3,13:19:32.69:599,33,0	1/1:2,8:16:28.74:389,29,0	1/1:12,9:23:46:736,46,0	1/1:5,12:21:46.30:698,46,0	1/1:10,8:20:45.11:698,45,0	1/1:4,8:12:15.05:274,15,0	1/1:1,16:19:48.06:797,48,0	1/1:8,18:29:50.60:785,51,0	1/1:3,13:19:30.06:492,30,0	0/0:29,0:29:75.16:0,75,895	0/0:18,0:18:42.06:0,42,500	0/0:25,0:26:64.43:0,64,748	0/0:23,0:25:61.44:0,61,745
chr10	20020870	.	C	CT	7675.32	PASS	AB=0.749;AC=49;AF=0.875;AN=56;BaseQRankSum=-1.994;DP=562;FS=31.008;HRun=12;HaplotypeScore=110.1015;InbreedingCoeff=0.2696;MQ=71.90;MQ0=0;MQRankSum=-3.598;QD=14.11;ReadPosRankSum=1.498;VQSLOD=3.1538;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,10:16:1.60:192,2,0	1/1:3,7:10:12.02:117,12,0	0/1:21,0:16:5.59:6,0,34	0/1:19,0:11:6.45:6,0,12	0/1:11,19:31:4.90:404,0,5	1/1:13,4:18:27.01:257,27,0	1/1:6,6:14:22.97:226,23,0	1/1:12,0:24:34.81:184,35,0	1/1:2,19:23:38.73:349,39,0	1/1:14,10:24:42.94:402,43,0	1/1:12,14:26:11.70:411,12,0	1/1:11,10:21:45.91:421,46,0	1/1:13,9:23:31.91:430,32,0	1/1:6,5:11:18.03:175,18,0	0/0:18,0:18:37.71:0,38,260	1/1:14,4:18:35.86:303,36,0	1/1:9,7:16:29.97:271,30,0	1/1:13,10:24:43.24:357,43,0	1/1:11,10:23:43.91:425,44,0	1/1:8,6:14:23.93:216,24,0	1/1:3,7:10:24.04:233,24,0	1/1:8,9:17:29.21:260,29,0	1/1:9,9:19:10.92:242,11,0	1/1:9,10:19:41.03:367,41,0	1/1:13,12:27:62.22:538,62,0	1/1:13,21:34:19.26:504,19,0	0/1:8,23:31:12.68:305,0,13	0/1:2,7:9:7.81:76,0,8
chr10	20020900	.	GGT	G	9140.14	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=2.916;DP=483;FS=3.347;HRun=0;HaplotypeScore=86.8188;InbreedingCoeff=0.9918;MQ=69.32;MQ0=0;MQRankSum=-5.144;QD=34.36;ReadPosRankSum=-0.778;VQSLOD=6.5780;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:57.18:0,57,966	0/0:8,0:8:21.07:0,21,369	0/0:28,0:17:35.55:0,36,420	0/0:22,0:12:19.03:0,19,304	0/0:29,0:29:72.21:0,72,1190	1/1:2,15:17:39.60:585,40,0	1/1:1,13:14:27.09:408,27,0	1/1:11,0:11:20.77:138,21,0	0/0:19,0:19:39.09:0,39,589	1/1:6,13:19:51.12:690,51,0	1/1:8,14:22:60.15:847,60,0	1/1:5,12:17:51.16:746,51,0	1/1:8,10:18:50.37:701,50,0	1/1:6,9:15:42.10:595,42,0	0/0:13,0:13:35.67:0,36,499	1/1:3,13:16:41.82:634,42,0	1/1:4,12:16:36.10:499,36,0	1/1:4,17:21:54.11:743,54,0	1/1:6,10:16:45.14:640,45,0	1/1:5,8:13:27.02:357,27,0	1/1:2,6:8:14.25:170,14,0	1/1:4,10:14:36.10:500,36,0	1/1:5,8:13:30.56:432,31,0	1/1:4,12:16:33.08:456,33,0	0/0:25,0:25:72.23:0,72,1165	0/0:18,0:18:42.12:0,42,719	0/0:22,0:22:36.09:0,36,546	0/0:10,0:10:14.12:0,14,214
chr10	20020901	.	GT	G	4576.69	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=8.981;DP=475;FS=3.331;HRun=1;HaplotypeScore=93.5972;InbreedingCoeff=0.9893;MQ=69.64;MQ0=0;MQRankSum=-4.813;QD=17.27;ReadPosRankSum=-1.617;VQSLOD=4.6693;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:60.11:0,60,759	0/0:8,0:8:21.06:0,21,290	0/0:25,0:16:31.35:0,31,342	0/0:22,0:13:13.05:0,13,248	0/0:28,0:28:72.16:0,72,920	1/1:16,1:17:41.48:296,41,0	1/1:14,1:15:26.60:173,27,0	1/1:12,0:12:26.77:198,27,0	0/0:19,0:19:38.22:0,38,440	1/1:16,3:19:50.42:355,50,0	1/1:16,6:22:58.87:386,59,0	1/1:12,5:17:50.35:341,50,0	1/1:13,5:18:48.99:337,49,0	1/1:10,5:15:41.50:291,41,0	0/0:13,0:13:20.55:0,21,339	1/1:13,2:15:41.39:271,41,0	1/1:13,3:16:35.58:246,36,0	1/1:20,1:21:53.36:367,53,0	1/1:13,4:17:47.46:332,47,0	1/1:9,4:13:26.60:175,27,0	1/1:7,1:8:14.88:125,15,0	1/1:10,3:13:35.48:241,35,0	1/1:10,1:11:32.62:226,33,0	1/1:14,2:16:32.54:218,33,0	0/0:25,0:25:75.16:0,75,913	0/0:16,0:16:42.09:0,42,558	0/0:20,0:20:35.03:0,35,407	0/0:10,0:10:14.07:0,14,167
chr10	20023065	.	G	GTT	10523.05	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-9.083;DP=574;FS=0.000;HRun=8;HaplotypeScore=72.0906;InbreedingCoeff=0.9936;MQ=69.05;MQ0=3;MQRankSum=-0.683;QD=29.81;ReadPosRankSum=-0.280;VQSLOD=4.7086;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:74.78:0,75,834	0/0:12,0:12:33.06:0,33,355	0/0:14,0:9:25.85:0,26,234	0/0:14,0:10:20.64:0,21,183	0/0:31,0:31:87.23:0,87,968	1/1:1,17:18:45.12:687,45,0	1/1:2,14:17:39.13:619,39,0	1/1:10,0:39:39.88:257,40,0	0/0:23,0:24:56.22:0,56,682	1/1:2,27:29:78.22:1179,78,0	1/1:2,12:14:27.05:376,27,0	1/1:2,18:20:42.14:667,42,0	1/1:3,6:9:15.05:229,15,0	1/1:1,13:14:39.13:619,39,0	0/0:17,0:17:48.11:0,48,526	1/1:2,10:13:26.58:390,27,0	1/1:3,20:25:59.17:868,59,0	1/1:2,20:21:39:619,39,0	1/1:8,22:30:66.21:1022,66,0	1/1:8,18:28:57.14:814,57,0	1/1:5,10:16:21.07:333,21,0	1/1:2,14:17:33.02:427,33,0	1/1:3,14:19:36.12:553,36,0	1/1:4,18:23:56.68:866,57,0	0/0:32,0:32:87.20:0,87,957	0/0:20,0:20:54.12:0,54,592	0/0:24,0:24:63.15:0,63,697	0/0:6,0:6:15.04:0,15,167
chr10	20023780	.	G	GTT	8885.43	PASS	AB=0.948;AC=36;AF=0.643;AN=56;BaseQRankSum=-6.728;DP=639;FS=3.227;HRun=11;HaplotypeScore=81.3143;InbreedingCoeff=0.8259;MQ=64.38;MQ0=4;MQRankSum=-0.318;QD=20.96;ReadPosRankSum=-1.360;VQSLOD=4.1992;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:26:66.08:0,66,640	0/0:3,0:3:9.01:0,9,87	0/0:20,0:12:5.67:0,6,60	0/1:22,0:13:0.63:1,0,76	0/0:28,0:29:62.73:0,63,575	1/1:2,24:27:52.42:737,52,0	1/1:5,8:15:20.55:254,21,0	1/1:8,0:22:9.78:112,10,0	0/0:7,0:29:43.82:0,44,189	1/1:4,21:26:66.20:924,66,0	1/1:7,19:26:54.09:724,54,0	1/1:6,24:31:56.57:763,57,0	1/1:11,15:26:60.13:824,60,0	1/1:8,7:15:32.94:446,33,0	0/0:39,0:39:90.02:0,90,867	1/1:5,26:31:54.18:782,54,0	1/1:9,14:24:7.01:434,7,0	1/1:4,14:20:41.96:547,42,0	1/1:7,10:16:30.06:380,30,0	1/1:2,15:20:50.09:628,50,0	1/1:6,12:18:9.03:130,9,0	1/1:1,10:10:29.50:352,30,0	1/1:7,16:25:28.62:422,29,0	1/1:4,17:21:27.09:391,27,0	0/0:22,0:22:50.77:0,51,494	0/1:23,2:25:33.15:33,0,394	0/0:32,0:35:66.51:0,67,702	0/0:11,0:11:18:0,18,174
chr10	20026233	.	AC	A	5222.81	PASS	AB=0.911;AC=51;AF=0.911;AN=56;BaseQRankSum=-1.467;DP=465;FS=10.722;HRun=11;HaplotypeScore=64.2538;InbreedingCoeff=0.2984;MQ=81.55;MQ0=0;MQRankSum=-3.501;QD=11.63;ReadPosRankSum=3.358;VQSLOD=3.4190;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,13:28:35.07:241,35,0	1/1:7,1:8:2.96:25,3,0	0/1:20,1:22:1.40:1,0,229	0/1:20,1:22:24.47:24,0,145	1/1:1,5:7:14.01:104,14,0	1/1:5,7:12:16.85:118,17,0	1/1:7,16:25:46.01:356,46,0	1/1:10,0:20:15.71:46,16,0	0/0:15,1:16:4.59:0,5,250	1/1:5,11:18:31.03:233,31,0	1/1:6,2:9:13.93:93,14,0	1/1:2,10:13:26:203,26,0	1/1:3,9:12:1.14:211,1,0	1/1:3,7:11:19.99:153,20,0	0/1:16,2:18:13.25:13,0,260	1/1:5,14:20:40.95:326,41,0	1/1:3,28:36:82.09:621,82,0	1/1:6,13:21:39.95:301,40,0	1/1:5,6:11:20.94:169,21,0	1/1:6,8:14:29.83:233,30,0	1/1:6,12:19:31.98:252,32,0	1/1:6,5:13:25:179,25,0	1/1:8,5:14:22.97:177,23,0	1/1:5,16:23:46.01:357,46,0	1/1:3,10:15:31.01:233,31,0	1/1:4,3:10:15.09:92,15,0	1/1:3,19:24:54.73:430,55,0	1/1:2,2:4:5.03:30,5,0
chr10	20026685	.	A	AAAGGAAGGAAGGAAGGAAGG	28283.17	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=1.336;DP=773;FS=22.273;HRun=0;HaplotypeScore=336.0540;InbreedingCoeff=0.7381;MQ=61.18;MQ0=4;MQRankSum=-5.530;QD=40.52;ReadPosRankSum=-0.479;VQSLOD=2.4824;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:12,0:23:15.05:887,15,0	1/1:6,0:6:9.03:330,9,0	0/0:29,0:23:8.58:0,9,273	0/0:25,0:23:12.04:0,12,231	1/1:12,0:29:18.02:781,18,0	1/1:19,5:38:5.65:834,6,0	1/1:36,0:36:54.16:2250,54,0	1/1:31,0:30:36.11:821,36,0	1/1:22,4:39:9.03:817,9,0	1/1:26,3:39:35.97:1747,36,0	1/1:8,3:15:14.41:707,14,0	1/1:21,7:40:6.02:557,6,0	1/1:20,3:33:10.85:633,11,0	1/1:28,0:29:48.12:2681,48,0	0/0:21,0:21:45.13:0,45,1611	1/1:17,2:29:6.02:398,6,0	1/1:26,1:27:36.12:1914,36,0	1/1:26,0:25:42.14:1765,42,0	1/1:21,0:21:35.48:1872,35,0	1/1:30,0:29:38.48:1797,38,0	1/1:22,0:22:27.09:1147,27,0	1/1:15,1:23:6.02:486,6,0	1/1:20,0:20:12.04:265,12,0	1/1:32,0:32:21.07:1385,21,0	1/1:15,0:29:24.08:1331,24,0	1/1:12,0:28:35.60:1443,36,0	1/1:22,0:38:18.06:1085,18,0	1/1:8,0:12:6.02:351,6,0
chr10	20027601	.	T	TTCTC	2852.22	PASS	AB=0.929;AC=40;AF=0.833;AN=48;BaseQRankSum=1.336;DP=626;FS=10.061;HRun=0;HaplotypeScore=144.0461;InbreedingCoeff=0.2883;MQ=66.31;MQ0=16;MQRankSum=-0.945;QD=5.83;ReadPosRankSum=-1.461;VQSLOD=1.5319;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:37,0:36:30.03:466,30,0	1/1:12,0:12:6.91:96,7,0	./.	./.	./.	./.	1/1:26,0:26:5.91:60,6,0	1/1:20,0:20:3.44:21,3,0	0/0:10,0:13:15.04:0,15,195	1/1:30,0:30:15.95:200,16,0	1/1:17,0:17:3.01:65,3,0	1/1:17,0:18:8.87:165,9,0	1/1:19,1:20:11.92:187,12,0	1/1:18,0:18:2.81:68,3,0	1/1:15,4:18:12.04:229,12,0	0/1:21,0:20:31.18:166,0,31	1/1:24,1:24:19.07:172,19,0	0/1:20,1:22:43.27:253,0,43	1/1:27,0:27:9.91:105,10,0	1/1:18,0:18:5.13:63,5,0	0/1:16,0:21:0:0,0,0	0/1:11,0:11:0:1,0,0	1/1:19,0:20:3:26,3,0	0/1:15,0:16:0:0,0,0	0/1:24,0:23:0:1,0,0	1/1:31,0:31:24.55:417,25,0	1/1:20,0:22:12.93:201,13,0	1/1:10,0:7:1.41:2,1,0
chr10	20027667	.	C	CT	5597.24	PASS	AB=0.586;AC=30;AF=0.536;AN=56;BaseQRankSum=-5.832;DP=407;FS=26.277;HRun=2;HaplotypeScore=66.3007;InbreedingCoeff=0.8649;MQ=69.39;MQ0=1;MQRankSum=-0.870;QD=24.44;ReadPosRankSum=0.924;VQSLOD=3.2465;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:47.82:0,48,504	0/0:4,0:4:9.01:0,9,101	0/0:25,0:17:42.33:0,42,458	0/0:24,0:19:11.11:0,11,367	0/0:10,0:10:27:0,27,274	0/1:4,11:16:10.55:283,0,11	1/1:3,16:19:36.08:509,36,0	0/0:18,0:18:41.84:0,42,353	0/0:20,0:20:56.35:0,56,528	1/1:2,7:11:25.96:222,26,0	1/1:4,12:16:29.42:328,29,0	1/1:1,17:18:29.69:440,30,0	1/1:1,5:6:8.06:94,8,0	1/1:8,8:16:34.08:367,34,0	0/0:14,0:14:32.87:0,33,309	1/1:4,9:13:20.38:379,20,0	1/1:7,12:19:35.85:565,36,0	1/1:2,15:18:37.68:527,38,0	1/1:5,11:16:41.52:438,42,0	1/1:1,9:10:23.91:244,24,0	1/1:1,6:7:12.04:179,12,0	1/1:0,11:11:33.11:462,33,0	0/1:5,10:15:0.50:205,0,1	1/1:4,13:17:24.55:356,25,0	0/0:10,0:11:24.01:0,24,275	0/0:8,0:8:17.92:0,18,198	0/0:9,0:9:24.03:0,24,278	0/0:14,0:14:38.94:0,39,443
chr10	20027668	.	T	TC	2317.70	PASS	AB=0.953;AC=28;AF=0.500;AN=56;BaseQRankSum=4.753;DP=402;FS=19.844;HRun=10;HaplotypeScore=73.0226;InbreedingCoeff=0.5442;MQ=69.88;MQ0=1;MQRankSum=-1.695;QD=9.58;ReadPosRankSum=0.868;VQSLOD=0.8471;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:26.77:0,27,218	0/0:4,0:4:8.98:0,9,73	0/0:25,0:17:38.88:0,39,311	0/0:25,0:20:5.75:0,6,170	0/0:11,0:11:14.94:0,15,122	0/1:16,0:16:16.61:143,0,17	1/1:18,0:18:32.60:227,33,0	0/1:18,2:20:0.05:0,0,0	0/0:19,0:19:18.14:0,18,188	1/1:9,0:9:8.93:71,9,0	1/1:15,1:16:5.36:152,5,0	0/1:18,0:18:9.15:170,0,9	1/1:6,0:6:5.92:42,6,0	0/1:13,2:15:2.06:150,0,2	0/0:13,0:13:9.49:0,9,94	0/1:13,0:13:13.59:187,0,14	1/1:20,0:20:14.18:254,14,0	1/1:17,0:17:37.41:292,37,0	1/1:12,3:15:26:206,26,0	1/1:9,0:10:13.28:73,13,0	1/1:9,0:8:11.81:77,12,0	1/1:11,0:11:32.48:248,32,0	0/1:12,1:13:22.60:81,0,23	1/1:16,0:16:2:142,2,0	0/0:9,0:11:22.99:0,23,175	0/0:7,0:8:14:0,14,104	0/0:8,0:9:20.01:0,20,153	0/0:13,0:14:32.94:0,33,269
chr10	20029003	.	G	GTGCATCCTCGGGCT	50261.72	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=1.182;DP=566;FS=5.254;HRun=0;HaplotypeScore=219.1173;InbreedingCoeff=0.9672;MQ=82.89;MQ0=0;MQRankSum=-17.756;QD=134.75;ReadPosRankSum=2.085;VQSLOD=4.5355;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:60.18:0,60,1945	0/0:7,0:7:21.05:0,21,769	0/0:23,0:23:66.15:0,66,2185	0/0:23,0:23:60.21:0,60,2092	0/0:14,0:14:30.09:0,30,1011	1/1:14,5:20:48.16:2576,48,0	1/1:28,4:35:90.31:4619,90,0	1/1:24,2:29:84.27:4622,84,0	0/0:22,0:22:60.21:0,60,2332	1/1:11,1:14:42.12:2173,42,0	1/1:6,1:7:15.05:786,15,0	1/1:23,8:36:90.31:5421,90,0	1/1:20,12:35:95.81:5578,96,0	1/1:21,7:29:77.60:4230,78,0	0/0:27,0:27:78.25:0,78,3088	1/1:17,6:24:63.22:3560,63,0	1/1:19,4:26:56.71:2983,57,0	1/1:14,10:27:60.21:3749,60,0	1/1:21,1:22:57.20:3350,57,0	1/1:8,0:8:12.04:665,12,0	1/1:16,3:22:33.11:1500,33,0	1/1:12,4:17:33.10:1778,33,0	1/1:3,0:3:3.01:209,3,0	1/1:11,7:19:42.14:2463,42,0	0/0:9,0:9:21.07:0,21,786	0/0:11,0:11:30.10:0,30,1243	0/0:22,0:22:63.22:0,63,2425	0/0:13,0:13:39.08:0,39,1307
chr10	20031858	.	T	TC	14292.38	PASS	AB=1.000;AC=35;AF=0.625;AN=56;BaseQRankSum=16.464;DP=775;FS=15.951;HRun=6;HaplotypeScore=100.3686;InbreedingCoeff=0.9292;MQ=80.78;MQ0=0;MQRankSum=-2.642;QD=29.11;ReadPosRankSum=0.606;VQSLOD=3.3351;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:96.20:0,96,972	0/0:14,0:14:39.04:0,39,374	0/0:27,0:26:71.82:0,72,677	0/1:14,0:14:11.10:11,0,125	0/0:30,0:30:90.17:0,90,901	1/1:4,21:25:63.20:791,63,0	1/1:2,16:18:42.13:527,42,0	1/1:5,28:33:83.82:897,84,0	0/0:32,0:32:96.18:0,96,962	1/1:7,34:41:99:1181,99,0	1/1:0,19:19:54.17:679,54,0	1/1:1,31:32:78.25:980,78,0	1/1:0,21:21:57.18:717,57,0	1/1:2,18:20:48.15:604,48,0	0/0:34,0:34:96.21:0,96,979	1/1:4,38:42:80.75:1328,81,0	1/1:4,25:29:60.19:755,60,0	1/1:1,30:31:78.25:981,78,0	1/1:8,19:27:56.76:622,57,0	1/1:1,29:30:84.04:979,84,0	1/1:3,26:29:60.19:755,60,0	1/1:0,30:30:84.12:1015,84,0	1/1:3,29:32:78.05:981,78,0	1/1:4,14:18:39.12:491,39,0	0/0:30,0:30:75.14:0,75,753	0/0:32,0:32:87.18:0,87,879	0/0:32,0:31:84.17:0,84,850	0/0:12,0:12:27.06:0,27,275
chr10	20032399	.	GA	G	12992.82	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=12.289;DP=651;FS=0.000;HRun=2;HaplotypeScore=64.6460;InbreedingCoeff=0.9977;MQ=86.44;MQ0=0;MQRankSum=-1.494;QD=36.91;ReadPosRankSum=3.039;VQSLOD=5.4459;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:90.24:0,90,1302	0/0:5,0:5:15.05:0,15,224	0/0:27,0:27:76.48:0,76,1104	0/0:20,0:20:55.69:0,56,788	0/0:27,0:27:81.27:0,81,1214	1/1:0,28:28:81.26:1052,81,0	1/1:0,12:12:33.11:429,33,0	0/0:35,0:35:99:0,102,1452	0/0:20,0:20:60.20:0,60,894	1/1:1,32:33:93.29:1192,93,0	1/1:0,21:21:63.20:818,63,0	1/1:0,23:23:66.21:857,66,0	1/1:0,17:17:51.17:662,51,0	1/1:0,16:16:39.13:506,39,0	0/0:32,0:32:96.33:0,96,1438	1/1:0,28:28:81.26:1052,81,0	1/1:0,29:29:87.28:1129,87,0	1/1:0,21:21:57.19:740,57,0	1/1:0,21:21:63.20:818,63,0	1/1:1,19:20:54.18:701,54,0	1/1:0,18:18:48.16:623,48,0	1/1:0,23:23:63.20:818,63,0	1/1:0,16:16:48.16:623,48,0	1/1:0,26:26:75.24:973,75,0	0/0:30,0:30:90.30:0,90,1349	0/0:22,1:23:30.27:0,30,951	0/0:34,0:33:99:0,102,1528	0/0:16,0:16:45.15:0,45,675
chr10	20034357	.	A	AC	1657.86	PASS	AB=0.705;AC=23;AF=0.411;AN=56;BaseQRankSum=-4.930;DP=385;FS=0.000;HRun=10;HaplotypeScore=53.5816;InbreedingCoeff=0.2528;MQ=80.21;MQ0=1;MQRankSum=0.143;QD=8.46;ReadPosRankSum=0.157;VQSLOD=1.4902;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:61.91:0,62,497	0/0:3,0:3:2.99:0,3,24	0/0:28,0:20:15.68:0,16,143	0/1:20,0:15:12.69:13,0,50	0/0:16,0:17:28.98:0,29,225	0/1:13,7:20:14.03:14,0,105	0/1:5,8:14:28.82:164,0,29	0/0:3,0:24:32.58:0,33,97	0/0:7,0:7:17.96:0,18,145	0/1:5,3:8:15.61:53,0,16	1/1:6,6:12:15.04:158,15,0	1/1:3,12:16:2.42:228,2,0	0/0:13,0:13:24.45:0,24,182	1/1:3,8:11:4.56:204,5,0	0/0:19,0:19:47.91:0,48,393	0/1:10,4:15:57.35:57,0,78	0/1:6,11:17:18.09:226,0,18	0/1:1,7:8:6.60:142,0,7	0/1:4,3:8:9.65:100,0,10	1/1:4,3:7:8.24:71,8,0	1/1:2,9:11:18.04:191,18,0	1/1:1,4:5:5.75:44,6,0	0/1:7,6:13:19.02:19,0,35	1/1:3,6:9:15.04:160,15,0	0/0:11,0:13:31.01:0,31,229	0/0:16,0:17:31.98:0,32,252	0/0:10,0:12:23:0,23,178	0/0:6,0:7:10.99:0,11,77
chr10	20036366	.	CGTGTGT	C	1465.97	PASS	AB=0.848;AC=26;AF=0.520;AN=50;BaseQRankSum=3.726;DP=571;FS=16.809;HRun=0;HaplotypeScore=121.8811;InbreedingCoeff=0.5188;MQ=66.34;MQ0=8;MQRankSum=-4.618;QD=4.87;ReadPosRankSum=-0.164;VQSLOD=1.4086;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:38:24.04:0,24,479	./.	./.	0/0:17,0:14:0.47:0,0,1	0/0:13,0:20:6.02:0,6,169	1/1:10,4:15:15.05:283,15,0	0/1:27,1:31:72.99:73,0,116	0/0:17,0:16:5.04:0,5,37	0/0:14,0:17:15.05:0,15,321	1/1:21,0:21:3.01:53,3,0	0/1:13,4:17:34.03:111,0,34	1/1:19,6:25:14.76:262,15,0	1/1:17,6:23:2.63:59,3,0	1/1:17,7:24:9.03:181,9,0	0/0:22,0:25:11.86:0,12,132	1/1:16,8:26:20.95:320,21,0	1/1:25,8:32:8.60:162,9,0	1/1:17,0:17:1.16:4,1,0	1/1:10,1:11:3.01:60,3,0	./.	1/1:34,0:33:1.24:3,1,0	1/1:12,0:12:2.99:24,3,0	1/1:8,3:11:3.01:32,3,0	0/0:17,4:21:0:0,0,0	0/0:15,0:15:15.05:0,15,441	0/0:33,0:33:15.05:0,15,401	0/0:22,0:21:21.05:0,21,459	0/0:7,0:9:12.04:0,12,234
chr10	20038967	.	TAAA	T	9698.77	PASS	AB=0.957;AC=35;AF=0.625;AN=56;BaseQRankSum=5.400;DP=645;FS=5.258;HRun=14;HaplotypeScore=113.1778;InbreedingCoeff=0.9208;MQ=81.25;MQ0=3;MQRankSum=-3.486;QD=23.43;ReadPosRankSum=7.725;VQSLOD=3.5739;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:38:99:0,108,1909	0/0:7,0:9:18.06:0,18,298	0/0:38,0:26:35.84:0,36,486	0/1:19,0:18:26.83:27,0,129	0/0:33,0:36:93.24:0,93,1529	1/1:2,22:25:55.76:664,56,0	1/1:4,15:19:39.09:456,39,0	1/1:7,17:24:44.71:523,45,0	0/0:0,0:14:32.88:0,33,253	1/1:5,15:20:42.02:491,42,0	1/1:3,18:21:48.04:560,48,0	1/1:7,14:22:16.28:332,16,0	1/1:5,16:21:42.04:490,42,0	1/1:2,22:24:66.18:770,66,0	0/0:18,0:20:42.13:0,42,728	1/1:5,19:24:45.04:525,45,0	1/1:2,13:15:30.07:351,30,0	1/1:4,21:25:57.08:666,57,0	1/1:4,9:14:32.17:357,32,0	1/1:3,28:31:72.06:840,72,0	1/1:2,18:20:36.03:421,36,0	1/1:5,21:28:56.87:616,57,0	1/1:4,25:30:70.81:839,71,0	1/1:3,26:29:66.18:771,66,0	0/0:16,0:20:42.09:0,42,673	0/0:23,0:24:57.17:0,57,952	0/0:16,0:17:42.14:0,42,730	0/0:15,0:15:45.10:0,45,721
chr10	20039756	.	AC	A	4716.42	PASS	AB=0.974;AC=36;AF=0.667;AN=54;BaseQRankSum=0.245;DP=571;FS=1.720;HRun=1;HaplotypeScore=61.9384;InbreedingCoeff=0.6923;MQ=65.28;MQ0=14;MQRankSum=-3.559;QD=10.99;ReadPosRankSum=-3.418;VQSLOD=1.6684;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:27:7.06:0,7,359	0/1:8,0:8:8.94:9,0,102	0/1:61,6:14:51.86:57,0,52	0/1:44,1:12:12.92:13,0,72	0/1:28,0:28:1.60:2,0,427	1/1:24,0:24:65.94:436,66,0	1/1:11,0:11:29.88:207,30,0	1/1:2,19:21:52.12:387,52,0	0/0:16,0:17:20.45:0,20,125	1/1:15,0:15:42.50:340,43,0	1/1:12,0:12:32.28:240,32,0	1/1:15,0:15:30.49:188,30,0	1/1:13,0:12:25.41:147,25,0	1/1:13,0:13:24.75:155,25,0	0/0:20,0:20:29.03:0,29,310	1/1:11,0:11:17.28:125,17,0	1/1:29,0:28:68.48:426,68,0	1/1:18,0:17:44.08:280,44,0	1/1:21,0:21:49.88:342,50,0	1/1:27,1:28:77.21:574,77,0	./.	1/1:16,1:17:40.40:296,40,0	1/1:22,0:22:53.04:368,53,0	1/1:11,0:11:21.37:126,21,0	0/0:21,0:21:28.52:0,29,356	0/0:25,0:25:40.78:0,41,385	0/0:16,0:16:10.68:0,11,210	0/0:14,0:14:21.22:0,21,246
chr10	20040377	.	CT	C	418.22	PASS	AB=0.897;AC=4;AF=0.071;AN=56;BaseQRankSum=2.551;DP=512;FS=1.393;HRun=10;HaplotypeScore=68.4184;InbreedingCoeff=0.3871;MQ=84.40;MQ0=0;MQRankSum=0.950;QD=7.60;ReadPosRankSum=-2.365;VQSLOD=1.4650;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:90.18:0,90,965	0/0:5,0:5:15.04:0,15,166	0/0:19,0:17:12.10:0,12,187	0/0:15,0:15:27.67:0,28,232	0/0:13,0:14:24.73:0,25,336	0/0:21,0:21:60.06:0,60,635	0/0:21,0:21:42.44:0,42,554	1/1:7,21:28:59.89:508,60,0	0/0:11,0:11:33.09:0,33,361	0/0:27,0:28:72.05:0,72,767	0/0:13,1:14:13.05:0,13,372	0/0:27,1:28:52.05:0,52,771	0/0:13,1:14:7.03:0,7,306	0/0:21,0:21:48.13:0,48,531	0/0:15,1:16:16.04:0,16,396	0/0:9,0:9:24.06:0,24,265	0/0:35,0:36:99:0,99,1076	0/0:31,0:33:74.04:0,74,816	0/0:17,0:17:39.11:0,39,431	0/0:12,0:12:27.07:0,27,299	0/1:17,2:19:10.13:10,0,321	0/0:12,0:12:36.06:0,36,379	0/0:11,2:13:1.02:0,1,238	0/0:16,1:17:22.06:0,22,462	0/0:16,1:17:19.07:0,19,420	0/0:22,1:23:28.09:0,28,538	0/1:7,1:8:8.03:8,0,137	0/0:10,0:10:30.05:0,30,308
chr10	20042102	.	T	TGTGA	25873.19	PASS	AB=0.760;AC=48;AF=0.857;AN=56;BaseQRankSum=-5.036;DP=1022;FS=1.849;HRun=0;HaplotypeScore=197.5540;InbreedingCoeff=0.4442;MQ=59.83;MQ0=14;MQRankSum=3.475;QD=29.10;ReadPosRankSum=8.443;VQSLOD=4.4737;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,49:55:92.89:2501,93,0	0/1:1,18:20:1.20:541,0,1	0/1:55,0:17:11.63:12,0,321	0/0:100,0:36:52.09:0,52,762	1/1:2,25:30:29.98:747,30,0	1/1:2,32:34:54.04:1430,54,0	1/1:6,32:41:8.81:171,9,0	0/1:48,0:44:54.11:54,0,331	1/1:7,33:41:63.64:1602,64,0	1/1:2,31:35:75.78:1673,76,0	1/1:0,16:17:21.07:566,21,0	1/1:3,39:48:54.18:1451,54,0	1/1:2,35:42:55.38:1332,55,0	1/1:2,28:36:48.16:1264,48,0	0/0:33,0:33:96.11:0,96,1336	1/1:4,35:41:81.17:2036,81,0	1/1:1,16:18:27.05:666,27,0	1/1:3,21:24:7.06:626,7,0	1/1:2,18:23:62.87:907,63,0	1/1:3,28:35:23.27:448,23,0	1/1:12,42:56:4.89:674,5,0	1/1:4,24:31:11.60:492,12,0	0/1:2,15:19:2.88:385,0,3	1/1:4,36:41:74.96:1959,75,0	1/1:0,23:24:32.97:889,33,0	1/1:0,21:21:59.71:1091,60,0	1/1:2,27:30:60.03:1551,60,0	1/1:1,19:22:33.07:805,33,0
chr10	20042104	.	T	TGA	10441.74	PASS	AB=0.996;AC=40;AF=0.714;AN=56;BaseQRankSum=5.208;DP=998;FS=11.073;HRun=0;HaplotypeScore=228.6666;InbreedingCoeff=0.1821;MQ=61.04;MQ0=15;MQRankSum=4.238;QD=13.02;ReadPosRankSum=11.291;VQSLOD=2.7496;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:52,2:54:94.12:987,94,0	0/1:19,0:19:1.10:199,0,1	0/0:61,0:18:4.53:0,5,333	0/0:100,0:36:58.33:0,58,766	1/1:25,0:25:29.60:297,30,0	1/1:32,0:32:53.62:550,54,0	0/1:34,0:34:12.48:62,0,12	0/1:50,0:46:90.97:91,0,384	1/1:38,0:38:60.62:646,61,0	0/1:31,0:31:59.38:564,0,59	0/1:19,0:19:0.42:199,0,0	1/1:45,1:46:49.26:565,49,0	1/1:41,2:43:55.28:610,55,0	1/1:34,0:34:47.48:484,47,0	0/0:32,0:32:96.11:0,96,1148	1/1:38,1:40:80.42:901,80,0	1/1:17,0:17:26.43:262,26,0	1/1:25,0:24:14.39:242,14,0	0/1:22,0:22:11.38:360,0,11	0/1:34,0:34:18.24:154,0,18	0/1:50,2:52:3.17:361,0,3	1/1:27,1:28:22.73:271,23,0	0/1:20,0:20:3.72:140,0,4	1/1:38,1:39:75.19:822,75,0	1/1:24,0:24:33.08:351,33,0	1/1:18,0:18:29.86:464,30,0	1/1:31,1:31:45.55:590,46,0	0/1:26,0:26:44.22:272,0,44
chr10	20042121	.	GAC	G	1044.42	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-1.254;DP=1046;FS=10.675;HRun=0;HaplotypeScore=279.5312;InbreedingCoeff=0.9447;MQ=68.55;MQ0=16;MQRankSum=-4.232;QD=27.48;ReadPosRankSum=-3.673;VQSLOD=2.3777;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:57,1:58:99:0,113,1936	0/0:13,0:13:22.06:0,22,395	0/0:84,0:37:78.69:0,79,1210	0/0:130,0:51:97.16:0,97,1410	0/0:25,0:25:43.62:0,44,607	0/0:33,0:33:71.15:0,71,1188	0/0:33,0:33:12.49:0,12,401	1/1:5,33:36:96.50:1139,97,0	0/0:41,0:41:81.21:0,81,1367	0/0:35,0:35:85.39:0,85,1494	0/0:20,0:20:38.35:0,38,598	0/0:51,0:51:85.61:0,86,1330	0/0:36,0:36:69.14:0,69,1220	0/0:35,0:35:72.14:0,72,1251	0/0:40,0:40:99:0,120,2028	0/0:44,0:44:82.34:0,82,1792	0/0:18,0:18:42.14:0,42,738	0/0:24,1:25:15.94:0,16,565	0/0:18,0:18:19.87:0,20,703	0/0:36,0:36:50.53:0,51,654	0/0:48,0:48:54.87:0,55,887	0/0:26,0:26:31.40:0,31,510	0/0:18,0:18:17.83:0,18,284	0/0:40,0:40:89.92:0,90,1500	0/0:23,0:23:54.17:0,54,944	0/0:16,0:16:32.37:0,32,753	0/0:33,0:32:69.46:0,69,1183	0/0:24,0:24:53.61:0,54,832
chr10	20042412	.	AAG	A	1889.05	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-2.137;DP=914;FS=11.597;HRun=0;HaplotypeScore=256.4849;InbreedingCoeff=0.8347;MQ=58.07;MQ0=2;MQRankSum=2.291;QD=36.33;ReadPosRankSum=-1.364;VQSLOD=1.3738;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,129,2105	0/0:12,0:12:36.12:0,36,642	0/0:40,0:31:77.31:0,77,1074	0/0:39,0:33:78.14:0,78,1124	0/0:27,0:27:69.22:0,69,1179	0/0:30,0:30:52.69:0,53,712	0/0:36,0:36:75.26:0,75,1286	1/1:1,51:52:99:1984,153,0	0/0:33,0:33:45.11:0,45,711	0/0:47,0:47:99:0,103,1819	0/0:23,0:23:41.98:0,42,542	0/0:37,1:38:56.29:0,56,1016	0/0:49,0:49:71.88:0,72,1063	0/0:39,0:39:56.99:0,57,821	0/0:38,0:38:99:0,99,1699	0/0:44,0:44:80.98:0,81,1202	0/0:20,0:20:2.25:0,2,301	0/0:16,0:15:27.07:0,27,451	0/0:23,0:23:57.14:0,57,921	0/0:37,0:37:56.99:0,57,858	0/0:44,0:44:91.22:0,91,1591	0/0:23,0:23:39.03:0,39,607	0/0:20,0:20:42.01:0,42,608	0/0:36,0:36:38.73:0,39,495	0/0:22,0:22:51.17:0,51,910	0/0:35,0:35:90.21:0,90,1505	0/0:25,0:25:72.18:0,72,1150	0/0:20,0:20:57.18:0,57,979
chr10	20042430	.	CTGTGTGTGTG	C	7103.09	PASS	AB=0.890;AC=28;AF=0.500;AN=56;BaseQRankSum=12.731;DP=819;FS=43.966;HRun=0;HaplotypeScore=314.3936;InbreedingCoeff=0.5795;MQ=52.93;MQ0=19;MQRankSum=-11.102;QD=15.78;ReadPosRankSum=-2.604;VQSLOD=2.5051;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:87.10:0,87,3012	0/0:13,0:12:30.04:0,30,947	0/0:38,0:21:24.08:0,24,790	0/0:34,0:20:18.06:0,18,607	0/0:26,0:26:48.16:0,48,1880	1/1:24,7:31:1.22:485,1,0	0/1:7,16:25:5.44:165,0,5	0/0:45,0:45:69.24:0,69,2519	0/0:15,0:33:12.52:0,13,315	1/1:41,0:40:4.02:1294,4,0	1/1:16,0:16:3.01:63,3,0	1/1:36,0:35:20.96:471,21,0	1/1:45,3:48:41.26:1122,41,0	1/1:33,1:33:20.86:479,21,0	0/0:29,0:29:63.22:0,63,2302	0/1:42,0:42:93:1146,0,93	0/1:15,0:15:74.65:75,0,81	0/1:14,0:13:33.43:152,0,33	1/1:12,8:20:3.57:631,4,0	1/1:27,0:27:15.05:375,15,0	1/1:29,2:31:8.05:86,8,0	1/1:22,0:20:9.03:224,9,0	1/1:14,0:13:6.02:168,6,0	1/1:29,0:27:6.91:169,7,0	0/0:20,0:20:38.57:0,39,1719	0/0:41,0:39:93.28:0,93,3566	0/0:26,0:26:54.66:0,55,1984	0/0:18,0:18:45.14:0,45,1727
chr10	20042445	.	TGTGTGTGTGTGAGAGAGAGAGAGAGAGAGA	T	17689.21	PASS	AB=0.552;AC=29;AF=0.518;AN=56;BaseQRankSum=13.447;DP=736;FS=29.096;HRun=0;HaplotypeScore=409.7756;InbreedingCoeff=0.6889;MQ=45.07;MQ0=21;MQRankSum=-10.955;QD=44.11;ReadPosRankSum=6.227;VQSLOD=1.7649;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:96.13:0,96,5843	0/0:14,0:13:36.06:0,36,1856	0/0:26,0:10:24.08:0,24,789	0/0:20,0:7:18.06:0,18,607	0/0:27,0:27:57.20:0,57,3624	1/1:14,2:29:17.79:1063,18,0	1/1:25,0:25:4.36:171,4,0	0/0:33,0:33:90.31:0,90,3131	0/0:33,0:32:16.82:0,17,733	1/1:9,24:32:32.32:2714,32,0	1/1:6,11:17:2.48:222,2,0	1/1:9,17:27:21.07:1383,21,0	1/1:8,32:41:41.62:2844,42,0	1/1:11,25:34:21.07:1599,21,0	0/0:34,0:33:90.31:0,90,5676	0/1:8,29:38:99:3506,0,204	0/1:3,13:16:72.68:235,0,73	0/1:3,14:17:33.43:472,0,33	1/1:17,0:17:26.83:906,27,0	1/1:6,17:23:15.05:1019,15,0	1/1:15,0:13:8.40:86,8,0	1/1:11,12:20:9.03:705,9,0	1/1:4,8:11:6.02:383,6,0	1/1:8,20:26:6.49:382,6,0	0/0:23,0:23:44.49:0,44,3349	0/0:40,0:37:99:0,111,6938	0/0:29,0:29:72.59:0,73,5335	0/0:17,0:17:48.15:0,48,3314
chr10	20042447	.	TGTGTGTGTGAGAGAGAGAGAGAGAGAGAGA	T	16198.50	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=13.823;DP=695;FS=27.897;HRun=0;HaplotypeScore=384.6866;InbreedingCoeff=0.6765;MQ=45.46;MQ0=20;MQRankSum=-10.438;QD=44.14;ReadPosRankSum=6.194;VQSLOD=2.0459;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:87.15:0,87,5445	0/0:13,0:12:27.09:0,27,1726	0/0:24,0:9:23.97:0,24,578	0/0:17,0:5:15.05:0,15,443	0/0:27,0:27:57.18:0,57,3436	1/1:29,0:28:18.25:995,18,0	1/1:22,0:23:5.26:136,5,0	0/0:34,0:34:96.27:0,96,2836	0/0:31,0:30:16.61:0,17,679	1/1:27,0:26:27.95:2314,28,0	1/1:12,1:13:3.01:241,3,0	1/1:22,0:21:21.07:1304,21,0	1/1:39,0:39:41.83:2640,42,0	1/1:32,1:31:21.07:1514,21,0	0/0:36,0:35:96.33:0,96,5893	0/1:36,0:35:99:3275,0,313	0/1:16,0:16:64.40:216,0,64	0/1:18,0:17:29.30:427,0,29	1/1:16,0:16:28.30:769,28,0	1/1:20,0:21:15.05:967,15,0	1/1:14,0:12:2.67:23,3,0	1/1:18,2:17:9.03:687,9,0	1/1:12,0:11:6.02:347,6,0	1/1:28,0:25:6.49:346,6,0	0/0:24,0:24:44.49:0,44,3226	0/0:41,0:38:99:0,114,6753	0/0:27,0:27:72.59:0,73,5300	0/0:16,0:16:45.13:0,45,3200
chr10	20042455	.	TGAGAGA	T	3150.02	PASS	AB=0.981;AC=35;AF=0.761;AN=46;BaseQRankSum=6.851;DP=656;FS=23.737;HRun=0;HaplotypeScore=227.6487;InbreedingCoeff=0.2857;MQ=44.92;MQ0=21;MQRankSum=-5.878;QD=6.21;ReadPosRankSum=-0.460;VQSLOD=0.9927;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:39,0:39:40.56:41,0,351	0/1:14,0:14:4.70:5,0,91	./.	./.	0/1:24,0:24:14.99:15,0,74	1/1:29,0:28:11.07:131,11,0	./.	./.	0/1:27,1:27:5.95:156,0,6	1/1:27,0:26:23.31:333,23,0	1/1:13,0:13:3.01:42,3,0	1/1:23,0:21:18.06:251,18,0	1/1:39,0:39:33.11:459,33,0	1/1:34,0:31:21.07:292,21,0	1/1:29,0:31:13.40:291,13,0	1/1:36,0:35:34.18:658,34,0	1/1:17,0:16:3.01:42,3,0	1/1:16,0:15:6.02:84,6,0	1/1:13,0:15:6.02:84,6,0	1/1:22,0:21:12.04:167,12,0	./.	1/1:19,0:17:9.03:126,9,0	1/1:12,0:11:3.01:42,3,0	1/1:28,0:26:3.48:43,3,0	0/0:20,4:24:11.69:0,12,129	0/1:38,0:35:38.58:39,0,335	0/0:27,0:28:13.76:0,14,414	0/0:15,0:15:17.92:0,18,240
chr10	20042543	.	AAG	A	1025.28	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.284;DP=815;FS=6.236;HRun=0;HaplotypeScore=127.9088;InbreedingCoeff=0.9989;MQ=75.92;MQ0=0;MQRankSum=0.939;QD=31.07;ReadPosRankSum=-2.945;VQSLOD=4.8084;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,111,1999	0/0:10,0:10:27.09:0,27,495	0/0:33,0:33:57.58:0,58,1528	0/0:42,0:42:99:0,123,1903	0/0:26,0:26:78.25:0,78,1389	0/0:26,0:26:63.20:0,63,1118	0/0:33,0:33:90.28:0,90,1581	1/1:6,27:33:81.24:1120,81,0	0/0:27,0:27:78.27:0,78,1385	0/0:46,0:46:99:0,135,2378	0/0:20,0:20:51.17:0,51,914	0/0:30,0:30:81.25:0,81,1423	0/0:29,0:29:81.28:0,81,1474	0/0:30,0:30:78.26:0,78,1392	0/0:32,0:32:90.29:0,90,1610	0/0:28,0:28:72.25:0,72,1297	0/0:26,0:26:69.22:0,69,1209	0/0:18,0:18:42.14:0,42,763	0/0:25,0:25:66.18:0,66,1136	0/0:28,0:28:81.28:0,81,1442	0/0:28,0:28:84.29:0,84,1529	0/0:31,0:31:90.31:0,90,1583	0/0:31,0:31:84.27:0,84,1459	0/0:21,0:21:48.16:0,48,806	0/0:35,0:35:96.33:0,96,1740	0/0:30,0:29:84.26:0,84,1455	0/0:28,0:28:84.27:0,84,1471	0/0:30,0:30:90.26:0,90,1563
chr10	20043022	.	A	AT	14629.15	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-14.116;DP=662;FS=0.297;HRun=1;HaplotypeScore=63.1068;InbreedingCoeff=0.9998;MQ=91.05;MQ0=0;MQRankSum=-2.215;QD=37.70;ReadPosRankSum=3.665;VQSLOD=5.3411;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,123,1476	0/0:9,0:9:27.09:0,27,350	0/0:26,0:26:75.21:0,75,903	0/0:27,0:27:73.41:0,73,769	0/0:19,0:19:54.14:0,54,669	1/1:0,35:35:87.29:1302,87,0	1/1:1,19:20:48.16:719,48,0	1/1:3,28:31:87.22:1236,87,0	0/0:30,0:30:84.23:0,84,1046	1/1:1,14:15:42.14:629,42,0	1/1:2,23:25:60.12:848,60,0	1/1:0,26:26:63.21:943,63,0	1/1:1,19:20:51.17:763,51,0	1/1:1,22:24:63.21:924,63,0	0/0:32,0:32:93.27:0,93,1166	1/1:2,23:25:60.20:899,60,0	1/1:1,25:26:66.18:963,66,0	1/1:0,14:14:36.12:538,36,0	1/1:2,14:16:42.11:604,42,0	1/1:0,21:21:63.15:916,63,0	1/1:2,37:39:93.32:1393,93,0	1/1:1,15:16:39.13:584,39,0	1/1:0,21:21:57.15:828,57,0	1/1:2,12:14:36.12:539,36,0	0/0:26,0:26:78.25:0,78,1012	0/0:20,0:20:60.20:0,60,778	0/0:21,0:20:63.13:0,63,783	0/0:21,0:21:63.17:0,63,786
chr10	20043602	.	T	TGA	626.70	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.003;DP=485;FS=2.144;HRun=0;HaplotypeScore=57.4213;InbreedingCoeff=0.9858;MQ=92.15;MQ0=0;MQRankSum=-2.928;QD=27.25;ReadPosRankSum=-4.765;VQSLOD=2.8835;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:81.26:0,81,1140	0/0:8,0:8:24.08:0,24,344	0/0:19,0:19:51.16:0,51,700	0/0:23,0:23:39.98:0,40,738	0/0:13,0:13:33.11:0,33,473	0/0:22,0:22:66.21:0,66,930	0/0:20,0:20:57.16:0,57,779	1/1:9,12:23:45.08:722,45,0	0/0:18,0:18:54.18:0,54,774	0/0:23,0:23:69.23:0,69,989	0/0:9,0:9:27.09:0,27,387	0/0:12,0:12:36.12:0,36,516	0/0:20,0:20:57.19:0,57,817	0/0:18,0:18:54.18:0,54,774	0/0:19,0:19:54.18:0,54,773	0/0:26,0:26:75.24:0,75,1059	0/0:13,0:13:36.12:0,36,516	0/0:25,0:25:72.24:0,72,1032	0/0:11,0:11:30.05:0,30,375	0/0:16,0:16:45.15:0,45,645	0/0:13,0:13:36.12:0,36,516	0/0:6,0:6:18.06:0,18,258	0/0:16,0:16:45.15:0,45,645	0/0:14,0:14:39.13:0,39,559	0/0:15,0:15:39.13:0,39,559	0/0:17,0:17:45.15:0,45,645	0/0:30,0:30:87.28:0,87,1226	0/0:8,0:8:24.08:0,24,344
chr10	20043823	.	T	TG	4306.46	PASS	AB=1.000;AC=31;AF=0.620;AN=50;BaseQRankSum=-5.896;DP=253;FS=17.293;HRun=7;HaplotypeScore=30.4294;InbreedingCoeff=0.8175;MQ=77.53;MQ0=0;MQRankSum=-1.203;QD=22.31;ReadPosRankSum=3.518;VQSLOD=3.0058;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:16.31:0,16,313	0/0:3,0:3:6.01:0,6,58	0/0:6,0:6:8.85:0,9,72	0/0:10,0:10:20.99:0,21,186	0/0:3,0:3:6:0,6,53	1/1:1,9:10:21.06:254,21,0	1/1:4,12:16:24.07:290,24,0	./.	0/1:9,0:9:11.56:12,0,169	1/1:1,11:12:33.09:387,33,0	1/1:1,9:10:20.85:253,21,0	1/1:2,11:13:21.06:252,21,0	1/1:1,13:14:36.11:435,36,0	1/1:1,6:7:15.05:181,15,0	0/0:5,0:5:5.41:0,5,81	1/1:0,7:7:18.06:217,18,0	1/1:3,17:20:39.12:471,39,0	1/1:3,18:21:42.13:507,42,0	1/1:5,4:9:15:165,15,0	1/1:2,8:10:21:230,21,0	1/1:4,15:19:30.09:362,30,0	./.	1/1:0,7:7:15.05:181,15,0	1/1:2,7:9:9.03:109,9,0	0/0:7,0:7:15.02:0,15,144	./.	0/0:8,0:8:17.23:0,17,95	0/0:3,0:3:9.01:0,9,87
chr10	20043940	.	C	CGAG	16012.81	PASS	AB=0.913;AC=33;AF=0.589;AN=56;BaseQRankSum=10.380;DP=548;FS=11.388;HRun=0;HaplotypeScore=91.6878;InbreedingCoeff=0.9239;MQ=91.08;MQ0=0;MQRankSum=-5.300;QD=48.82;ReadPosRankSum=4.978;VQSLOD=6.4058;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,111,1731	0/0:7,0:7:18.06:0,18,299	0/0:23,0:23:63.20:0,63,974	0/0:30,0:30:73.95:0,74,1138	0/0:16,0:16:48.16:0,48,799	1/1:2,17:19:48.16:1070,48,0	1/1:1,13:14:36.12:797,36,0	0/0:30,0:30:78.25:0,78,1250	0/0:17,0:17:51.17:0,51,849	1/1:0,16:16:42.09:902,42,0	1/1:1,9:10:27.09:597,27,0	1/1:3,10:13:33.11:729,33,0	1/1:0,19:19:51.18:1154,51,0	1/1:1,13:15:42.14:917,42,0	0/0:29,0:29:87.28:0,87,1422	1/1:1,14:15:33.11:747,33,0	1/1:3,34:38:81.28:1833,81,0	1/1:1,15:17:36.12:815,36,0	1/1:5,9:14:30.10:677,30,0	1/1:0,22:22:60.16:1308,60,0	1/1:5,29:35:63.22:1427,63,0	1/1:1,14:15:33.11:746,33,0	1/1:0,11:12:23.91:525,24,0	1/1:3,30:33:75.26:1698,75,0	0/0:8,0:8:24.08:0,24,399	0/1:19,2:21:72.30:72,0,813	0/0:12,0:12:33.11:0,33,549	0/0:9,0:9:27.09:0,27,449
chr10	20044349	.	CGGT	C	16639.58	PASS	AB=0.947;AC=33;AF=0.589;AN=56;BaseQRankSum=13.738;DP=619;FS=2.141;HRun=0;HaplotypeScore=95.7135;InbreedingCoeff=0.9252;MQ=90.60;MQ0=0;MQRankSum=-6.495;QD=45.59;ReadPosRankSum=5.393;VQSLOD=6.7951;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,123,2947	0/0:13,0:13:39.13:0,39,932	0/0:23,0:23:54.21:0,54,1432	0/0:30,0:30:78.16:0,78,1618	0/0:17,0:17:51.17:0,51,1195	1/1:2,19:21:57.20:1059,57,0	1/1:0,34:34:90.31:1677,90,0	0/0:25,0:25:75.26:0,75,1816	0/0:26,0:26:78.27:0,78,1884	1/1:0,25:25:72.25:1336,72,0	1/1:0,11:11:33.11:615,33,0	1/1:1,25:26:63.22:1154,63,0	1/1:0,26:26:69.24:1247,69,0	1/1:0,17:17:45.15:839,45,0	0/0:29,0:29:87.26:0,87,1973	1/1:0,25:25:66.23:1228,66,0	1/1:0,21:21:54.19:1006,54,0	1/1:0,12:12:24.08:447,24,0	1/1:0,19:19:57.20:1059,57,0	1/1:0,17:17:42.06:709,42,0	1/1:0,31:31:76.14:1327,76,0	1/1:0,7:7:21.07:329,21,0	1/1:0,14:14:39.13:726,39,0	1/1:0,41:41:99:1845,99,0	0/0:12,0:12:36.12:0,36,865	0/1:17,1:18:34.63:35,0,1075	0/0:28,0:28:84.29:0,84,2036	0/0:10,0:10:30.10:0,30,675
chr10	20044521	.	T	TG	176.25	PASS	AB=0.789;AC=2;AF=0.036;AN=56;BaseQRankSum=-3.570;DP=574;FS=1.191;HRun=8;HaplotypeScore=146.7145;InbreedingCoeff=-0.0346;MQ=60.82;MQ0=2;MQRankSum=0.323;QD=4.64;ReadPosRankSum=-2.741;VQSLOD=-0.1907;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:37:62.06:0,62,554	0/0:8,0:8:15.01:0,15,137	0/1:27,0:18:15.85:16,0,287	0/0:16,0:11:15.48:0,15,138	0/0:13,1:14:39.02:0,39,357	0/0:22,0:22:54.01:0,54,494	0/0:28,0:27:50.99:0,51,467	0/1:3,8:11:24.83:247,0,25	0/0:17,0:17:45.02:0,45,411	0/0:21,0:21:42.01:0,42,384	0/0:16,0:16:27.01:0,27,247	0/0:18,0:18:29.93:0,30,266	0/0:22,0:23:56.98:0,57,514	0/0:23,0:23:50.04:0,50,439	0/0:17,0:17:45:0,45,404	0/0:20,0:20:54.03:0,54,494	0/0:18,0:18:41.97:0,42,376	0/0:31,0:31:81.05:0,81,747	0/0:18,0:18:39.01:0,39,354	0/0:26,0:26:59.59:0,60,544	0/0:25,0:26:36.01:0,36,329	0/0:17,0:17:36.01:0,36,329	0/0:17,0:17:36:0,36,330	0/0:16,0:16:23.56:0,24,219	0/0:23,0:23:42.01:0,42,384	0/0:29,0:29:78.04:0,78,713	0/0:21,0:21:45.02:0,45,412	0/0:12,0:12:36.02:0,36,329
chr10	20044541	.	TTGTGTGTG	T	5076.49	PASS	AB=0.829;AC=31;AF=0.574;AN=54;BaseQRankSum=9.968;DP=565;FS=0.949;HRun=0;HaplotypeScore=201.3975;InbreedingCoeff=0.6323;MQ=53.64;MQ0=7;MQRankSum=-6.827;QD=14.76;ReadPosRankSum=-0.411;VQSLOD=3.3701;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:39:57.12:0,57,1396	0/0:4,0:7:12.04:0,12,314	./.	0/0:24,0:10:0.47:0,0,1	0/0:8,0:13:15.05:0,15,478	1/1:10,6:22:0.65:389,1,0	1/1:13,5:23:18.28:321,18,0	0/0:20,0:19:33.10:0,33,885	0/0:18,0:19:49.04:0,49,1484	1/1:10,5:18:27.29:413,27,0	1/1:8,4:12:2.91:8,3,0	1/1:4,11:18:38.18:758,38,0	1/1:8,6:19:41.79:583,42,0	1/1:8,11:22:45.47:711,45,0	0/0:14,0:18:45.14:0,45,1398	0/1:14,3:20:56.23:282,0,56	1/1:14,3:22:24.62:333,25,0	1/1:15,6:29:18.80:509,19,0	0/1:12,3:17:5.29:265,0,5	1/1:17,4:23:9.11:147,9,0	1/1:20,1:24:9.44:54,9,0	1/1:9,5:15:0.64:51,1,0	1/1:8,2:13:7.23:86,7,0	1/1:8,3:14:8.90:154,9,0	0/0:9,0:19:33.10:0,33,968	0/1:17,1:30:12.76:13,0,1199	0/0:11,0:22:42.03:0,42,1020	0/0:7,0:12:27.09:0,27,902
chr10	20044562	.	TGTGTGTGTGCGTGC	T	13087.24	PASS	AB=1.000;AC=32;AF=0.571;AN=56;BaseQRankSum=8.362;DP=518;FS=12.085;HRun=0;HaplotypeScore=218.2419;InbreedingCoeff=0.7841;MQ=46.28;MQ0=5;MQRankSum=-8.819;QD=39.18;ReadPosRankSum=-0.475;VQSLOD=2.6282;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:75.20:0,75,2597	0/0:7,0:7:18.06:0,18,749	0/0:8,0:1:2.99:0,3,24	0/0:17,0:5:6.48:0,6,56	0/0:10,0:10:24.08:0,24,911	1/1:24,0:24:30.02:1110,30,0	1/1:22,0:23:42.14:975,42,0	0/0:16,0:15:45.07:0,45,1217	0/0:17,0:17:49.04:0,49,2491	1/1:20,0:20:51.06:1262,51,0	1/1:4,4:8:9.03:144,9,0	1/1:20,0:20:45.15:1462,45,0	1/1:19,0:18:48.14:1286,48,0	1/1:20,0:20:48.15:1450,48,0	0/0:18,0:18:54.18:0,54,2590	0/1:18,0:18:51.08:780,0,51	1/1:21,1:22:27.56:641,28,0	1/1:27,0:28:63.18:1542,63,0	1/1:19,0:18:37.07:889,37,0	1/1:20,0:20:23.99:429,24,0	1/1:26,0:27:11.35:191,11,0	1/1:9,0:9:7.72:192,8,0	1/1:17,0:17:23.47:404,23,0	1/1:18,0:18:10.32:277,10,0	0/0:20,0:20:42.13:0,42,1852	0/1:21,0:20:53.37:53,0,1649	0/0:20,0:20:48.05:0,48,1774	0/0:11,0:11:33.11:0,33,1556
chr10	20044572	.	CGTGCGCGCGT	C	9947.08	PASS	AB=0.962;AC=33;AF=0.589;AN=56;BaseQRankSum=11.362;DP=472;FS=3.287;HRun=0;HaplotypeScore=182.9674;InbreedingCoeff=0.8010;MQ=50.22;MQ0=5;MQRankSum=-11.491;QD=32.72;ReadPosRankSum=3.578;VQSLOD=4.7004;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:57.20:0,57,2378	0/0:7,0:7:18.06:0,18,808	0/0:12,0:4:6.91:0,7,50	0/0:13,0:4:12.03:0,12,163	0/0:11,0:11:27.07:0,27,894	1/1:14,6:20:7.29:762,7,0	1/1:18,6:23:28.44:749,28,0	0/0:19,0:18:48.12:0,48,1348	0/0:16,0:16:42.14:0,42,1965	1/1:11,6:17:41.37:1159,41,0	1/1:4,4:8:9.03:242,9,0	1/1:9,10:20:42.14:1211,42,0	1/1:6,9:15:34.65:884,35,0	1/1:7,11:18:35.60:1037,36,0	0/0:18,0:18:52.06:0,52,2176	1/1:10,4:14:4.58:557,5,0	1/1:17,4:21:20.57:531,21,0	1/1:19,6:25:31.35:720,31,0	1/1:3,13:15:36.10:864,36,0	1/1:1,12:13:7.38:250,7,0	1/1:26,1:27:1.60:82,2,0	1/1:4,5:9:6.02:159,6,0	1/1:11,2:13:17.62:491,18,0	1/1:15,3:18:6.96:185,7,0	0/0:17,0:17:39.13:0,39,1777	0/1:24,1:25:64.33:64,0,1929	0/0:15,0:15:30.09:0,30,1292	0/0:9,0:9:27.09:0,27,1056
chr10	20044576	.	CGCGCGT	C	6753.11	PASS	AB=1.000;AC=33;AF=0.589;AN=56;BaseQRankSum=12.822;DP=447;FS=2.071;HRun=0;HaplotypeScore=159.3066;InbreedingCoeff=0.8316;MQ=50.78;MQ0=4;MQRankSum=-12.172;QD=24.47;ReadPosRankSum=5.296;VQSLOD=4.7149;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:63.22:0,63,1862	0/0:6,0:6:18.06:0,18,591	0/0:10,0:4:6.48:0,6,64	0/1:12,0:6:11.58:12,0,142	0/0:11,0:11:29.31:0,29,715	1/1:12,8:20:27.09:542,27,0	1/1:11,11:22:27.09:536,27,0	0/0:18,0:17:45.11:0,45,1025	0/0:15,0:15:42.14:0,42,1384	1/1:8,8:16:42.14:844,42,0	1/1:8,0:8:9.03:190,9,0	1/1:14,6:20:42.14:789,42,0	1/1:12,3:14:33:555,33,0	1/1:16,0:16:36.12:661,36,0	0/0:18,0:18:48.16:0,48,1511	1/1:7,6:13:21.06:383,21,0	1/1:9,10:19:18.18:353,18,0	1/1:14,9:23:24.08:455,24,0	1/1:15,0:14:34.74:594,35,0	1/1:13,0:13:9.02:182,9,0	1/1:3,23:26:3.01:66,3,0	1/1:7,2:9:6.02:108,6,0	1/1:5,7:12:17.90:369,18,0	1/1:7,10:17:6.96:114,7,0	0/0:15,0:15:42.14:0,42,1341	0/0:23,0:23:6.26:0,6,1447	0/0:15,0:15:36.12:0,36,1034	0/0:9,0:9:26.76:0,27,744
chr10	20046636	.	CG	C	736.63	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.158;DP=637;FS=6.403;HRun=4;HaplotypeScore=67.6997;InbreedingCoeff=0.9989;MQ=92.06;MQ0=0;MQRankSum=-0.514;QD=26.31;ReadPosRankSum=-2.575;VQSLOD=1.6482;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:69.21:0,69,928	0/0:11,0:11:30.10:0,30,420	0/0:32,0:32:86.81:0,87,1123	0/0:21,0:21:42.28:0,42,618	0/0:18,0:18:51.16:0,51,692	0/0:31,0:31:78.24:0,78,1056	0/0:30,0:30:84.24:0,84,1108	1/1:3,25:28:72.19:832,72,0	0/0:20,0:20:57.15:0,57,745	0/0:26,0:26:78.22:0,78,1028	0/0:10,0:10:30.10:0,30,419	0/0:24,0:24:69.15:0,69,878	0/0:25,0:25:75.19:0,75,989	0/0:23,0:23:63.15:0,63,805	0/0:23,0:23:63.20:0,63,864	0/0:26,0:26:75.15:0,75,983	0/0:19,0:19:54.18:0,54,746	0/0:22,0:22:66.19:0,66,902	0/0:18,0:18:51.16:0,51,688	0/0:19,0:19:54.17:0,54,737	0/0:28,0:28:81.24:0,81,1111	0/0:24,0:24:60.17:0,60,804	0/0:15,0:15:42.14:0,42,587	0/0:29,0:29:87.28:0,87,1202	0/0:20,0:20:48.14:0,48,638	0/0:25,0:25:66.19:0,66,878	0/0:21,0:21:60.16:0,60,786	0/0:23,0:23:66.16:0,66,859
chr10	20047207	.	C	CG	17379.45	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=19.914;DP=842;FS=13.145;HRun=4;HaplotypeScore=118.1586;InbreedingCoeff=0.9917;MQ=87.98;MQ0=0;MQRankSum=-2.782;QD=36.28;ReadPosRankSum=3.728;VQSLOD=3.0325;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,153,1734	0/0:13,0:13:36.10:0,36,408	0/0:31,0:31:72.16:0,72,845	0/0:28,0:28:59.12:0,59,603	0/0:29,0:29:81.22:0,81,913	1/1:1,15:16:36.12:490,36,0	1/1:1,16:17:45.15:615,45,0	0/0:32,0:32:81.22:0,81,910	0/0:36,0:36:99:0,105,1181	1/1:2,30:32:87.24:1140,87,0	1/1:2,22:24:66.22:902,66,0	1/1:4,43:47:99:1670,123,0	1/1:1,30:31:78.07:1066,78,0	1/1:6,25:31:89.31:1170,89,0	0/0:42,0:42:99:0,120,1351	1/1:1,33:34:93.31:1271,93,0	1/1:0,37:37:99:1423,105,0	1/1:1,20:21:54.18:728,54,0	1/1:1,9:10:27.08:354,27,0	1/1:2,41:43:99:1509,114,0	1/1:1,36:37:99:1394,102,0	1/1:2,29:31:87.29:1188,87,0	1/1:3,28:31:78.26:1064,78,0	1/1:1,36:37:99:1394,102,0	0/0:28,0:28:78.22:0,78,883	0/0:35,1:36:64.32:0,64,1116	0/0:31,0:31:90.24:0,90,1010	0/0:3,0:3:9.03:0,9,102
chr10	20047629	.	T	TG	13790.15	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=-16.294;DP=729;FS=3.720;HRun=4;HaplotypeScore=68.1532;InbreedingCoeff=0.9991;MQ=73.95;MQ0=0;MQRankSum=-1.760;QD=34.05;ReadPosRankSum=2.660;VQSLOD=5.6663;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,114,1271	0/0:17,0:17:45.13:0,45,510	0/0:23,0:22:57.14:0,57,622	0/0:20,0:19:54.11:0,54,589	0/0:35,0:35:96.26:0,96,1079	1/1:2,22:24:57.19:780,57,0	1/1:3,21:24:48.16:656,48,0	0/0:32,0:32:68.47:0,68,934	0/0:24,0:24:69.18:0,69,773	1/1:2,31:33:90.25:1183,90,0	1/1:1,26:27:69.14:920,69,0	1/1:1,21:22:60.20:821,60,0	1/1:0,26:26:72.24:985,72,0	1/1:0,17:17:45.15:615,45,0	0/0:35,0:35:99:0,105,1163	1/1:1,31:32:75.25:1026,75,0	1/1:2,18:20:45.15:616,45,0	1/1:2,13:15:42.11:552,42,0	1/1:2,19:21:60.15:761,60,0	1/1:2,28:30:81.18:1062,81,0	1/1:3,29:32:81.27:1108,81,0	1/1:6,28:34:72.24:984,72,0	1/1:0,28:28:75.07:1026,75,0	1/1:1,19:20:50.74:697,51,0	0/0:27,0:27:72.20:0,72,816	0/0:24,1:25:19.01:0,19,596	0/0:26,0:26:75.21:0,75,851	0/0:22,0:22:39.11:0,39,442
chr10	20048417	.	C	CA	9807.49	PASS	AB=0.938;AC=35;AF=0.625;AN=56;BaseQRankSum=-7.496;DP=667;FS=0.000;HRun=9;HaplotypeScore=92.6479;InbreedingCoeff=0.9286;MQ=75.89;MQ0=0;MQRankSum=-6.102;QD=24.64;ReadPosRankSum=-1.131;VQSLOD=4.5258;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:76.20:0,76,787	0/0:6,0:6:14.99:0,15,130	0/1:13,1:15:0.34:0,0,162	0/0:18,0:18:20.35:0,20,240	0/0:38,0:38:98.95:0,99,859	1/1:2,22:24:69.15:751,69,0	1/1:6,12:18:39.11:431,39,0	1/1:5,20:25:51.12:555,51,0	0/0:23,0:23:65.98:0,66,573	1/1:4,26:31:75.02:802,75,0	1/1:1,21:23:62.96:664,63,0	1/1:7,14:22:53.97:571,54,0	1/1:2,24:27:59.70:631,60,0	1/1:6,14:20:19.07:438,19,0	0/0:22,2:24:2.62:0,3,481	1/1:7,18:25:40.13:663,40,0	1/1:3,13:15:39.11:431,39,0	1/1:2,15:17:48.11:522,48,0	1/1:9,13:22:56.92:579,57,0	1/1:9,23:32:78.20:855,78,0	1/1:2,7:9:18.92:193,19,0	1/1:5,24:29:40.12:671,40,0	1/1:4,19:23:60.16:664,60,0	1/1:8,12:20:36.53:386,37,0	0/0:32,0:32:89.97:0,90,781	0/0:30,0:30:77.33:0,77,671	0/0:41,1:42:36.61:0,37,745	0/0:18,0:18:52.54:0,53,447
chr10	20048603	.	CTG	C	1578.85	PASS	AB=1.000;AC=28;AF=0.519;AN=54;BaseQRankSum=9.164;DP=530;FS=4.923;HRun=0;HaplotypeScore=98.8149;InbreedingCoeff=0.7613;MQ=69.26;MQ0=30;MQRankSum=-3.872;QD=6.96;ReadPosRankSum=-2.093;VQSLOD=2.5967;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:32:65.87:0,66,921	0/0:9,0:8:15.05:0,15,236	0/0:47,0:10:8.31:0,8,90	0/0:49,0:13:5.36:0,5,35	0/0:18,0:18:47.94:0,48,653	1/1:15,0:15:12.02:117,12,0	0/1:20,0:20:0:0,0,0	0/0:16,0:16:42.14:0,42,677	0/0:15,0:15:30.06:0,30,388	1/1:16,0:16:38.72:414,39,0	1/1:22,0:22:3:29,3,0	1/1:10,0:10:3:29,3,0	1/1:18,0:18:21.03:203,21,0	1/1:11,0:11:0.78:51,1,0	0/0:22,0:22:60.08:0,60,903	1/1:14,0:14:18.03:177,18,0	1/1:12,0:12:6.01:58,6,0	1/1:16,0:16:11.69:91,12,0	1/1:1,9:10:27.08:333,27,0	1/1:19,0:19:18.03:180,18,0	./.	1/1:14,0:13:6.01:58,6,0	1/1:12,0:12:2.43:29,2,0	0/1:18,0:18:0.03:0,0,0	0/0:23,0:23:45.03:0,45,645	0/0:20,0:20:57.08:0,57,799	0/0:23,0:21:50.21:0,50,531	0/0:4,0:4:9.03:0,9,141
chr10	20048610	.	TGTACACACAC	T	4279.52	PASS	AB=0.515;AC=28;AF=0.519;AN=54;BaseQRankSum=6.968;DP=555;FS=0.582;HRun=0;HaplotypeScore=134.1920;InbreedingCoeff=0.7671;MQ=65.16;MQ0=32;MQRankSum=-3.770;QD=18.37;ReadPosRankSum=0.662;VQSLOD=3.9166;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:39:65.92:0,66,1477	0/0:7,0:6:18.06:0,18,477	0/0:46,0:8:8.31:0,8,90	0/0:47,0:11:6.07:0,6,37	0/0:22,0:22:56.86:0,57,1409	1/1:2,13:17:12:397,12,0	0/1:1,15:17:0:0,0,0	0/0:16,0:16:45.15:0,45,794	0/0:18,0:18:30.09:0,30,558	1/1:0,15:15:41.73:663,42,0	1/1:2,21:24:3.21:105,3,0	1/1:1,9:9:3.01:104,3,0	1/1:0,17:19:24.04:709,24,0	1/1:1,6:8:0.63:181,1,0	0/0:31,0:30:72.03:0,72,1839	1/1:1,11:14:18.06:604,18,0	1/1:1,10:12:5.70:188,6,0	1/1:5,13:19:11.70:166,12,0	1/1:10,0:9:27.08:333,27,0	1/1:1,18:21:18.06:516,18,0	./.	1/1:3,14:16:6.02:208,6,0	1/1:1,11:13:3.26:105,3,0	0/1:1,16:17:0.08:0,0,0	0/0:22,0:22:45.12:0,45,1214	0/0:23,0:23:69.23:0,69,1478	0/0:25,0:23:53.19:0,53,1336	0/0:3,0:3:9.03:0,9,205
chr10	20048612	.	TAC	T	1270.03	PASS	AB=0.845;AC=37;AF=0.804;AN=46;BaseQRankSum=4.170;DP=559;FS=13.344;HRun=0;HaplotypeScore=106.8741;InbreedingCoeff=0.1081;MQ=63.81;MQ0=33;MQRankSum=-1.511;QD=3.22;ReadPosRankSum=1.968;VQSLOD=1.4534;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:34,7:41:8.52:96,9,0	1/1:7,0:6:3.01:32,3,0	./.	0/0:47,0:11:0:0,0,0	1/1:20,0:21:17.83:163,18,0	1/1:17,0:17:11.36:56,11,0	./.	0/0:19,0:19:6.02:0,6,69	1/1:7,0:17:11.36:56,11,0	1/1:16,0:15:8.52:42,9,0	1/1:24,0:24:2.84:14,3,0	1/1:10,0:9:2.84:14,3,0	1/1:19,0:19:19.89:97,20,0	1/1:8,0:8:5.28:27,5,0	0/1:26,4:29:11.35:11,0,210	1/1:14,0:14:17:82,17,0	0/1:13,0:13:11.71:19,0,12	1/1:19,0:19:2.84:14,3,0	./.	1/1:22,0:22:13.88:69,14,0	./.	1/1:17,0:16:5.68:28,6,0	1/1:13,0:13:2.73:14,3,0	0/1:16,0:17:0.05:0,0,0	0/1:11,2:22:28.02:78,0,28	1/1:13,9:22:23.89:238,24,0	0/1:13,9:23:12.33:236,0,12	./.
chr10	20049223	.	GA	G	2868.32	PASS	AB=0.700;AC=33;AF=0.635;AN=52;BaseQRankSum=3.668;DP=430;FS=38.764;HRun=9;HaplotypeScore=86.4321;InbreedingCoeff=0.8438;MQ=42.45;MQ0=33;MQRankSum=-6.155;QD=11.29;ReadPosRankSum=4.185;VQSLOD=0.3844;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:18:30.49:0,30,324	0/0:7,0:6:15.03:0,15,161	./.	./.	0/0:25,0:24:36.08:0,36,394	1/1:8,11:15:26.80:247,27,0	1/1:8,4:12:8.63:81,9,0	1/1:7,15:18:45.02:411,45,0	0/0:17,0:16:33.55:0,34,367	1/1:12,11:21:17.13:281,17,0	1/1:13,4:16:14.72:132,15,0	1/1:4,5:8:11.29:107,11,0	1/1:8,15:21:28.99:295,29,0	1/1:2,5:6:14.09:135,14,0	0/0:18,0:17:30.08:0,30,337	1/1:4,16:20:26.71:269,27,0	1/1:5,4:8:14.23:134,14,0	1/1:6,7:12:17.97:164,18,0	1/1:12,8:18:26.56:243,27,0	1/1:7,13:20:21.99:215,22,0	1/1:5,3:7:0.70:63,1,0	1/1:4,0:4:2.22:7,2,0	0/1:8,6:12:3.78:94,0,4	1/1:3,10:12:20.99:191,21,0	0/0:21,0:20:24.53:0,25,263	0/0:22,1:23:23.69:0,24,478	0/0:25,0:25:48.06:0,48,511	0/0:13,0:8:15.01:0,15,159
chr10	20049821	.	C	CATAAATAAATAAATAA	8422.72	PASS	AC=28;AF=0.583;AN=48;BaseQRankSum=3.588;DP=336;FS=38.276;HRun=0;HaplotypeScore=140.2712;InbreedingCoeff=0.8167;MQ=68.06;MQ0=0;MQRankSum=-8.329;QD=44.33;ReadPosRankSum=-5.129;VQSLOD=1.1335;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:33.04:0,33,1127	0/0:3,0:3:9.03:0,9,397	./.	0/0:13,0:10:3.01:0,3,48	0/0:24,0:24:42.13:0,42,1657	1/1:6,3:9:15.05:879,15,0	./.	1/1:50,0:48:93.24:2860,93,0	0/0:7,0:7:9.03:0,9,309	1/1:10,0:10:8.99:292,9,0	1/1:5,6:10:8.99:314,9,0	1/1:7,2:9:3.01:154,3,0	1/1:4,0:4:3.01:154,3,0	1/1:11,0:11:11.91:218,12,0	0/0:12,0:12:21.07:0,21,923	1/1:7,4:11:12.04:698,12,0	1/1:21,0:21:29.84:561,30,0	1/1:9,6:16:18.02:883,18,0	1/1:14,0:14:23.98:474,24,0	1/1:4,3:8:12.01:478,12,0	./.	1/1:8,0:8:2.97:20,3,0	1/1:4,4:8:9.03:435,9,0	./.	0/0:16,0:16:36.12:0,36,1332	0/0:8,0:8:15.04:0,15,426	0/0:13,0:13:27.06:0,27,971	0/0:13,0:13:24.08:0,24,945
chr10	20050789	.	A	AGGG	5717.99	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=7.092;DP=477;FS=50.279;HRun=5;HaplotypeScore=115.1996;InbreedingCoeff=0.9174;MQ=66.60;MQ0=11;MQRankSum=-8.994;QD=20.28;ReadPosRankSum=1.554;VQSLOD=-0.6640;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:39:0,39,495	0/0:7,0:7:12.03:0,12,172	0/0:39,0:26:61.12:0,61,731	0/0:32,0:23:32.14:0,32,469	0/0:9,0:9:15.04:0,15,211	1/1:11,2:13:12.03:184,12,0	1/1:16,0:15:11.87:175,12,0	0/0:22,0:22:42.11:0,42,567	0/0:16,0:16:33.09:0,33,474	1/1:15,0:15:20.68:349,21,0	1/1:15,1:16:11.99:184,12,0	1/1:26,1:27:42.01:666,42,0	1/1:18,3:22:54.59:867,55,0	1/1:18,2:20:39.13:674,39,0	0/0:14,0:14:32.40:0,32,481	1/1:20,1:21:33.09:573,33,0	1/1:18,0:18:30.05:507,30,0	1/1:5,0:5:6.02:107,6,0	1/1:15,0:15:32.47:517,32,0	1/1:12,1:13:16.21:195,16,0	1/1:11,4:15:11.57:220,12,0	1/1:20,0:22:21:297,21,0	1/1:18,0:16:6.02:103,6,0	1/1:17,0:18:6:100,6,0	0/0:8,0:8:15.05:0,15,219	0/0:16,0:16:42.14:0,42,598	0/0:9,0:8:21.06:0,21,290	0/0:4,0:4:8.50:0,8,67
chr10	20050793	.	G	GGGGGA	9241.53	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=7.079;DP=502;FS=59.441;HRun=0;HaplotypeScore=126.6827;InbreedingCoeff=0.9148;MQ=63.46;MQ0=11;MQRankSum=-9.344;QD=29.81;ReadPosRankSum=2.931;VQSLOD=2.5398;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:38.94:0,39,546	0/0:6,0:6:12.04:0,12,173	0/0:43,0:26:38.40:0,38,779	0/0:31,0:22:16.77:0,17,469	0/0:7,0:7:15.05:0,15,229	1/1:3,7:13:12.04:257,12,0	1/1:5,13:18:15.52:373,16,0	0/0:18,0:18:48.04:0,48,696	0/0:15,0:15:39.04:0,39,614	1/1:4,11:17:27.58:632,28,0	1/1:5,12:21:11.99:256,12,0	1/1:5,20:33:41.85:1042,42,0	1/1:20,3:21:57.55:1183,58,0	1/1:2,16:18:39.13:1112,39,0	0/0:15,0:15:35.40:0,35,599	1/1:5,17:25:36.09:989,36,0	1/1:3,16:22:33.06:885,33,0	1/1:2,3:6:9.03:247,9,0	1/1:7,9:16:33.54:698,34,0	1/1:3,10:13:2.12:239,2,0	1/1:19,0:16:18.01:269,18,0	1/1:5,14:21:21.02:518,21,0	1/1:6,12:20:6.02:190,6,0	1/1:6,8:18:12.04:350,12,0	0/0:7,0:7:15.05:0,15,238	0/0:18,0:18:44.26:0,44,684	0/0:11,0:10:27.06:0,27,427	0/0:4,0:4:9.03:0,9,108
chr10	20051122	.	AG	A	12081.64	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=12.794;DP=655;FS=3.412;HRun=5;HaplotypeScore=75.8986;InbreedingCoeff=0.9994;MQ=81.80;MQ0=0;MQRankSum=-5.066;QD=31.46;ReadPosRankSum=2.731;VQSLOD=5.6618;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,102,1359	0/0:7,0:7:21.07:0,21,287	0/0:20,0:20:56.28:0,56,661	0/0:18,0:18:45.08:0,45,553	0/0:24,0:24:66.20:0,66,884	1/1:6,17:22:60.13:658,60,0	1/1:0,22:22:54.15:613,54,0	0/0:30,0:30:75.19:0,75,975	0/0:18,0:18:51.16:0,51,678	1/1:2,18:20:57.16:646,57,0	1/1:0,22:22:66.12:731,66,0	1/1:3,23:26:72.19:809,72,0	1/1:0,19:19:57.16:646,57,0	1/1:3,16:19:48.13:544,48,0	0/0:27,0:27:69.22:0,69,928	1/1:2,33:35:99:1148,102,0	1/1:0,32:32:90.26:1020,90,0	1/1:0,15:15:45.13:510,45,0	1/1:5,16:21:60.15:663,60,0	1/1:4,18:22:57.15:637,57,0	1/1:0,25:25:69.20:783,69,0	1/1:2,22:24:72.19:804,72,0	1/1:2,23:25:72.21:815,72,0	1/1:3,31:34:93.26:1054,93,0	0/0:19,0:19:51.17:0,51,697	0/0:28,1:29:44.21:0,44,963	0/0:31,0:31:87.26:0,87,1157	0/0:10,0:10:30.10:0,30,410
chr10	20051204	.	G	GA	9007.43	PASS	AB=0.938;AC=33;AF=0.589;AN=56;BaseQRankSum=-10.168;DP=619;FS=26.803;HRun=9;HaplotypeScore=68.9892;InbreedingCoeff=0.8921;MQ=85.06;MQ0=0;MQRankSum=-1.802;QD=25.02;ReadPosRankSum=2.470;VQSLOD=3.4869;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:89.04:0,89,864	0/0:4,0:4:6:0,6,52	0/0:22,0:24:46.31:0,46,368	0/1:14,1:15:5.96:6,0,141	0/0:28,0:27:33.26:0,33,554	1/1:6,18:23:31.09:563,31,0	1/1:2,10:13:29.91:313,30,0	0/0:32,0:32:92.77:0,93,779	0/0:19,0:19:56.99:0,57,495	1/1:5,20:25:57.15:631,57,0	1/1:2,16:18:28.72:509,29,0	1/1:4,5:11:23.72:220,24,0	1/1:2,19:21:28.11:538,28,0	1/1:6,14:20:51.12:553,51,0	0/0:14,0:14:38.97:0,39,334	1/1:7,19:26:17.40:645,17,0	1/1:7,23:30:75.19:818,75,0	1/1:3,18:21:53.67:559,54,0	1/1:5,17:22:5.01:500,5,0	1/1:2,25:27:69.10:736,69,0	1/1:5,14:19:45.11:490,45,0	1/1:8,13:21:60.10:623,60,0	1/1:2,26:28:75.16:816,75,0	1/1:5,14:19:45.10:488,45,0	0/0:23,1:24:6.07:0,6,461	0/0:29,0:29:77.34:0,77,659	0/0:28,0:28:74.96:0,75,646	0/0:19,0:19:47.34:0,47,415
chr10	20051701	.	TA	T	6228.64	PASS	AB=0.867;AC=33;AF=0.589;AN=56;BaseQRankSum=10.663;DP=549;FS=7.380;HRun=10;HaplotypeScore=61.1231;InbreedingCoeff=0.9152;MQ=80.05;MQ0=0;MQRankSum=-0.568;QD=19.77;ReadPosRankSum=4.996;VQSLOD=5.5312;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:69.57:0,70,723	0/0:13,0:13:39.11:0,39,431	0/0:22,1:21:11.52:0,12,236	0/0:15,0:13:10.59:0,11,63	0/0:27,0:27:75.19:0,75,822	1/1:2,15:17:35.99:312,36,0	1/1:2,9:11:17.99:156,18,0	0/0:21,0:21:54.11:0,54,584	0/0:14,0:14:39.09:0,39,423	1/1:3,25:28:74.82:624,75,0	1/1:4,18:22:47.97:417,48,0	1/1:2,14:16:32.99:286,33,0	1/1:2,20:22:53.98:469,54,0	1/1:2,12:14:32.98:286,33,0	0/0:23,1:24:37.12:0,37,638	1/1:4,17:21:50.98:443,51,0	1/1:3,24:27:62.98:547,63,0	1/1:1,14:15:41.99:364,42,0	1/1:3,15:18:44.95:381,45,0	1/1:3,24:28:67.92:570,68,0	1/1:2,7:9:20.99:182,21,0	1/1:0,20:20:53.93:462,54,0	1/1:3,19:22:47.80:400,48,0	1/1:0,12:12:35.99:312,36,0	0/0:24,0:24:66.18:0,66,730	0/0:19,0:19:57.12:0,57,612	0/0:26,1:27:49.11:0,49,750	0/1:11,2:13:16.02:16,0,286
chr10	20052979	.	TA	T	4925.94	PASS	AB=0.960;AC=34;AF=0.607;AN=56;BaseQRankSum=9.991;DP=662;FS=4.485;HRun=15;HaplotypeScore=104.1416;InbreedingCoeff=0.8101;MQ=75.46;MQ0=2;MQRankSum=3.067;QD=11.67;ReadPosRankSum=5.565;VQSLOD=4.3326;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,1:25:28.67:0,29,360	0/0:11,0:12:26.99:0,27,237	0/0:45,1:25:1.04:0,1,65	0/1:36,0:21:24.43:24,0,57	0/0:34,3:40:43.29:0,43,552	1/1:3,16:20:49.31:313,49,0	1/1:5,24:31:51.26:365,51,0	0/0:23,0:23:45.60:0,46,187	0/0:7,0:15:2.03:0,2,78	1/1:7,27:34:76.61:491,77,0	1/1:6,21:27:50.10:323,50,0	1/1:3,15:18:47.10:303,47,0	1/1:3,22:25:65.02:422,65,0	1/1:5,15:21:43.39:274,43,0	0/0:21,1:23:28.65:0,29,339	1/1:7,11:20:42.48:261,42,0	1/1:5,21:26:53.19:346,53,0	1/1:3,14:17:42.87:273,43,0	1/1:6,10:16:30.01:192,30,0	1/1:7,16:23:43.85:276,44,0	1/1:6,18:24:42.35:315,42,0	1/1:3,18:21:18.47:243,18,0	1/1:6,13:20:28.52:175,29,0	1/1:3,17:20:50.25:326,50,0	0/0:22,0:23:44.55:0,45,341	0/0:20,1:21:19.72:0,20,295	0/1:19,2:23:2.89:3,0,332	0/0:12,0:12:26.97:0,27,232
chr10	20052992	.	A	AC	5933.61	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=8.154;DP=681;FS=2.218;HRun=0;HaplotypeScore=102.0410;InbreedingCoeff=0.9950;MQ=68.26;MQ0=3;MQRankSum=2.254;QD=14.65;ReadPosRankSum=6.607;VQSLOD=6.4097;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:66.03:0,66,748	0/0:14,0:14:36.08:0,36,447	0/0:38,0:14:29.42:0,29,323	0/0:37,0:20:12.10:0,12,200	0/0:37,0:37:99:0,103,1109	1/1:19,0:19:51.24:260,51,0	1/1:32,0:32:74.84:411,75,0	1/1:0,27:29:83.86:853,84,0	0/0:15,0:15:24.84:0,25,219	1/1:31,0:31:83.45:522,83,0	1/1:29,0:29:47.03:365,47,0	1/1:23,0:23:55.89:346,56,0	1/1:25,0:25:69.73:358,70,0	1/1:18,0:18:41.79:226,42,0	0/0:24,0:24:70.36:0,70,800	1/1:23,0:22:58.94:340,59,0	1/1:27,0:27:51.22:313,51,0	1/1:24,0:24:46.74:286,47,0	1/1:19,0:19:51.27:314,51,0	1/1:23,0:23:24.49:211,24,0	1/1:23,0:23:62.35:347,62,0	1/1:21,0:21:33.96:241,34,0	1/1:19,0:19:44.28:254,44,0	1/1:20,0:20:54.18:287,54,0	0/0:24,0:24:66.65:0,67,658	0/0:22,0:22:60.08:0,60,683	0/0:23,0:23:58.39:0,58,675	0/0:18,0:18:45.04:0,45,496
chr10	20053568	.	G	GC	1435.27	PASS	AB=1.000;AC=32;AF=0.571;AN=56;BaseQRankSum=4.436;DP=219;FS=3.470;HRun=8;HaplotypeScore=34.4104;InbreedingCoeff=0.6295;MQ=83.54;MQ0=1;MQRankSum=-1.065;QD=10.63;ReadPosRankSum=1.327;VQSLOD=1.0334;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:10.03:0,10,80	0/0:4,0:4:2.99:0,3,27	0/0:8,0:8:15:0,15,135	0/0:9,0:9:2.20:0,2,65	0/0:6,0:6:14.99:0,15,132	1/1:3,8:11:9.03:104,9,0	1/1:5,8:13:6.02:69,6,0	0/0:15,0:15:17.66:0,18,149	0/1:8,0:8:1.73:2,0,99	1/1:1,2:4:3.01:33,3,0	1/1:2,2:4:2.94:18,3,0	1/1:1,6:7:9.03:103,9,0	1/1:7,5:12:17.92:173,18,0	1/1:6,6:12:24.48:261,24,0	0/0:4,0:4:9:0,9,82	1/1:1,3:4:3.01:34,3,0	1/1:3,9:12:11.94:136,12,0	1/1:1,8:9:19.30:210,19,0	1/1:7,4:11:14.63:148,15,0	1/1:0,3:3:8.97:88,9,0	1/1:3,8:11:12.04:138,12,0	1/1:3,1:4:3.01:35,3,0	1/1:3,1:4:5.99:56,6,0	0/1:6,0:6:14.83:20,0,15	0/0:6,0:6:8.69:0,9,81	0/0:6,0:6:9.88:0,10,84	0/0:9,0:9:18:0,18,164	0/0:3,0:3:9:0,9,82
chr10	20054003	.	G	GA	13000.73	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=-17.845;DP=746;FS=1.256;HRun=8;HaplotypeScore=64.3288;InbreedingCoeff=0.9991;MQ=72.61;MQ0=0;MQRankSum=-1.609;QD=29.08;ReadPosRankSum=0.206;VQSLOD=5.1191;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:45.01:0,45,412	0/0:9,0:9:24.01:0,24,220	0/0:12,0:13:35.04:0,35,300	0/0:12,0:12:20.98:0,21,187	0/0:49,0:49:99:0,141,1279	1/1:3,29:32:84.25:969,84,0	1/1:4,23:27:60.18:692,60,0	0/0:45,0:45:89.64:0,90,802	0/0:19,0:19:54.03:0,54,494	1/1:4,32:36:99:1108,99,0	1/1:6,19:26:35.58:645,36,0	1/1:2,22:24:43.95:705,44,0	1/1:3,26:29:66.20:762,66,0	1/1:4,29:33:81.24:935,81,0	0/0:32,0:32:87.04:0,87,796	1/1:4,25:29:63.19:726,63,0	1/1:2,25:27:69.17:782,69,0	1/1:0,17:17:51.15:589,51,0	1/1:3,25:28:75.18:850,75,0	1/1:3,26:29:56.71:877,57,0	1/1:3,27:30:78.23:900,78,0	1/1:3,33:36:99:1113,99,0	1/1:2,26:28:75.22:863,75,0	1/1:0,16:16:42.12:485,42,0	0/0:23,0:23:63.03:0,63,577	0/0:39,2:41:44.76:0,45,910	0/0:24,0:24:66.03:0,66,604	0/0:14,0:14:42.02:0,42,384
chr10	20056007	.	TTC	T	14615.44	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=13.417;DP=642;FS=1.314;HRun=0;HaplotypeScore=78.5518;InbreedingCoeff=0.9976;MQ=88.02;MQ0=1;MQRankSum=-3.389;QD=39.72;ReadPosRankSum=3.093;VQSLOD=7.0553;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:87.30:0,87,1680	0/0:15,0:15:42.14:0,42,811	0/0:28,0:28:75.26:0,75,1370	0/0:20,0:20:51.17:0,51,935	0/0:34,0:34:99:0,102,1903	1/1:0,26:26:72.24:1103,72,0	1/1:1,21:22:57.19:873,57,0	0/0:29,0:29:87.29:0,87,1646	0/0:14,0:14:42.14:0,42,811	1/1:2,24:26:75.23:1107,75,0	1/1:1,20:21:57.19:873,57,0	1/1:0,25:25:66.22:1011,66,0	1/1:1,25:26:75.25:1149,75,0	1/1:1,21:22:57.19:873,57,0	0/0:22,0:22:66.21:0,66,1242	1/1:0,17:17:45.15:689,45,0	1/1:0,10:10:27.09:414,27,0	1/1:0,26:26:57.19:873,57,0	1/1:5,18:23:54.18:827,54,0	1/1:0,26:26:78.26:1195,78,0	1/1:1,33:34:81.28:1241,81,0	1/1:0,23:22:54.18:827,54,0	1/1:1,24:25:63.21:965,63,0	1/1:1,15:16:39.13:597,39,0	0/0:20,0:20:60.21:0,60,1131	0/0:25,0:25:75.26:0,75,1432	0/0:30,0:30:90.31:0,90,1728	0/0:7,0:7:15.05:0,15,290
chr10	20056612	.	AGCTACCAAT	A	16187.43	PASS	AB=0.960;AC=33;AF=0.589;AN=56;BaseQRankSum=16.226;DP=493;FS=1.130;HRun=0;HaplotypeScore=156.8774;InbreedingCoeff=0.9167;MQ=78.24;MQ0=0;MQRankSum=-16.356;QD=62.02;ReadPosRankSum=3.278;VQSLOD=4.7111;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,123,5438	0/0:12,0:12:36.11:0,36,1619	0/0:14,0:14:36.12:0,36,1518	0/0:18,0:18:48.10:0,48,1959	0/0:31,0:31:93.31:0,93,4274	1/1:0,14:14:27.05:763,27,0	1/1:1,14:15:33.05:947,33,0	0/0:27,0:27:75.26:0,75,3540	0/0:13,0:13:39.13:0,39,1913	1/1:0,22:22:60.14:1717,60,0	1/1:0,20:20:42.10:1228,42,0	1/1:0,14:14:42.14:1301,42,0	1/1:0,14:14:33.11:1023,33,0	1/1:0,19:19:48.12:1414,48,0	0/0:21,0:21:60.19:0,60,2710	1/1:1,19:20:48.12:1414,48,0	1/1:3,15:18:45.12:1323,45,0	1/1:6,7:13:35.98:827,36,0	1/1:1,11:12:33.07:769,33,0	1/1:0,18:18:39.05:1062,39,0	1/1:0,6:6:8.61:203,9,0	1/1:1,7:8:23.98:596,24,0	1/1:1,12:13:30.10:929,30,0	1/1:0,11:11:20.81:650,21,0	0/0:21,0:21:63.22:0,63,2943	0/1:23,1:24:20.78:21,0,2986	0/0:16,0:16:48.16:0,48,2224	0/0:18,0:18:54.19:0,54,2647
chr10	20056676	.	ATTT	A	3964.11	PASS	AC=30;AF=0.556;AN=54;BaseQRankSum=15.187;DP=421;FS=2.339;HRun=8;HaplotypeScore=120.6930;InbreedingCoeff=0.9574;MQ=60.06;MQ0=0;MQRankSum=-10.865;QD=20.86;ReadPosRankSum=1.124;VQSLOD=1.0301;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:81.27:0,81,1728	0/0:12,0:12:30.09:0,30,601	0/0:14,0:11:20.56:0,21,245	0/0:6,0:4:3.01:0,3,37	0/0:23,0:23:57.18:0,57,1195	1/1:11,0:11:26.83:250,27,0	1/1:5,2:7:14.85:141,15,0	0/0:25,0:25:72.24:0,72,1532	0/0:12,0:12:36.12:0,36,785	1/1:16,7:23:59.44:636,59,0	1/1:13,4:17:37.72:357,38,0	1/1:5,1:6:10.88:113,11,0	1/1:11,1:12:19.76:140,20,0	1/1:9,2:11:29.49:245,29,0	0/0:18,0:18:51.18:0,51,1111	1/1:17,3:20:49.85:474,50,0	1/1:14,1:15:33.30:294,33,0	1/1:10,2:12:25.56:243,26,0	1/1:5,3:8:15.88:175,16,0	1/1:14,3:17:38.49:314,38,0	./.	1/1:9,1:10:23.89:252,24,0	1/1:12,3:15:26.63:250,27,0	1/1:6,0:6:11.45:81,11,0	0/0:22,0:22:63.21:0,63,1337	0/0:26,0:26:69.24:0,69,1504	0/0:28,0:28:84.29:0,84,1775	0/0:14,0:14:27.07:0,27,476
chr10	20056681	.	T	TA	2744.16	PASS	AB=0.659;AC=25;AF=0.463;AN=54;BaseQRankSum=13.315;DP=383;FS=0.860;HRun=0;HaplotypeScore=94.8020;InbreedingCoeff=0.6298;MQ=62.27;MQ0=0;MQRankSum=-9.000;QD=17.70;ReadPosRankSum=4.019;VQSLOD=6.0816;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:87.26:0,87,1167	0/0:10,0:10:30.07:0,30,385	0/0:17,0:13:14.83:0,15,118	0/0:4,0:1:2.88:0,3,15	0/0:20,0:20:60.17:0,60,798	1/1:1,7:10:26.04:237,26,0	0/1:3,3:6:2.38:80,0,2	0/0:28,0:28:81.24:0,81,1060	0/0:14,0:14:42.11:0,42,552	0/1:9,12:21:14.18:339,0,14	1/1:4,8:13:15.84:252,16,0	0/1:2,3:5:1.38:78,0,1	1/1:2,3:8:10.99:103,11,0	1/1:2,8:10:12.36:226,12,0	0/0:19,0:19:57.17:0,57,766	1/1:3,14:17:14.05:387,14,0	1/1:1,12:13:32.98:353,33,0	1/1:2,5:10:10.95:152,11,0	0/1:4,2:6:23.15:49,0,23	0/1:5,7:13:7.22:193,0,7	./.	1/1:2,7:9:15.59:206,16,0	1/1:3,6:9:4.72:168,5,0	1/1:0,5:5:12.02:120,12,0	0/0:23,0:23:69.20:0,69,905	0/0:24,0:24:72.23:0,72,991	0/0:30,0:30:90.25:0,90,1191	0/0:9,0:9:27.02:0,27,280
chr10	20058066	.	TG	T	9294.39	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=12.205;DP=617;FS=5.507;HRun=8;HaplotypeScore=74.6065;InbreedingCoeff=0.9991;MQ=83.48;MQ0=0;MQRankSum=-3.660;QD=24.46;ReadPosRankSum=4.400;VQSLOD=5.6056;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:81.22:0,81,952	0/0:7,0:7:21.06:0,21,252	0/0:19,0:20:36.46:0,36,581	0/0:15,0:15:29.63:0,30,307	0/0:29,0:29:75.17:0,75,840	1/1:2,21:23:54.08:521,54,0	1/1:3,20:23:48.08:464,48,0	0/0:21,0:21:48.12:0,48,557	0/0:15,0:15:42.10:0,42,481	1/1:2,25:27:75.08:715,75,0	1/1:2,10:13:29.08:267,29,0	1/1:1,20:21:54.09:521,54,0	1/1:2,19:21:44.94:434,45,0	1/1:1,21:22:60.10:579,60,0	0/0:18,0:18:48.15:0,48,580	1/1:1,16:17:48.08:464,48,0	1/1:5,32:37:93.14:898,93,0	1/1:6,28:34:84.13:811,84,0	1/1:1,15:16:45.07:434,45,0	1/1:1,26:27:75.12:723,75,0	1/1:1,29:30:81.13:782,81,0	1/1:5,20:25:60.09:579,60,0	1/1:2,12:14:33.05:319,33,0	1/1:2,28:30:81.12:782,81,0	0/0:25,0:25:68.99:0,69,798	0/0:21,0:21:45.11:0,45,518	0/0:24,0:24:66.07:0,66,774	0/0:13,0:13:27.08:0,27,325
chr10	20058507	.	GGA	G	9817.73	PASS	AB=0.899;AC=38;AF=0.679;AN=56;BaseQRankSum=14.631;DP=702;FS=4.810;HRun=0;HaplotypeScore=115.3525;InbreedingCoeff=0.8336;MQ=75.11;MQ0=6;MQRankSum=-1.483;QD=21.67;ReadPosRankSum=3.274;VQSLOD=5.4761;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:46:88.16:0,88,1524	0/1:11,1:12:2.66:3,0,444	0/0:38,0:26:41.88:0,42,509	0/0:43,0:32:31.40:0,31,486	0/0:28,1:29:24.44:0,24,872	1/1:7,17:24:39.12:465,39,0	1/1:4,11:15:24.07:286,24,0	1/1:3,18:21:29.56:584,30,0	1/1:6,17:23:45.14:536,45,0	1/1:9,23:32:66.12:758,66,0	1/1:5,21:27:60.02:693,60,0	1/1:2,13:16:29.92:336,30,0	1/1:10,19:30:47.98:550,48,0	1/1:7,17:24:48.14:572,48,0	0/0:19,1:20:18.38:0,18,728	1/1:6,19:26:57.01:658,57,0	1/1:7,20:27:54.17:644,54,0	1/1:1,24:25:63.19:751,63,0	1/1:3,5:8:12.02:130,12,0	1/1:8,16:24:48.14:564,48,0	1/1:10,18:28:48.15:572,48,0	1/1:5,17:23:54:621,54,0	1/1:9,11:22:35.60:364,36,0	1/1:3,20:25:59.85:672,60,0	0/0:22,1:23:24.40:0,24,822	0/1:18,3:21:59.13:59,0,571	0/0:35,2:37:3.68:0,4,979	0/0:13,0:13:30.10:0,30,473
chr10	20058903	.	A	AGTGTGTGTGTGTGT	7713.08	PASS	AB=0.961;AC=35;AF=0.648;AN=54;BaseQRankSum=0.039;DP=619;FS=7.671;HRun=0;HaplotypeScore=244.5971;InbreedingCoeff=0.6611;MQ=60.57;MQ0=14;MQRankSum=-6.921;QD=19.33;ReadPosRankSum=-4.414;VQSLOD=2.1158;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:38,0:37:99:206,0,932	0/0:6,0:6:3.01:0,3,117	0/0:28,0:13:5.96:0,6,45	./.	0/0:30,0:31:36.09:0,36,1000	1/1:12,2:15:6.02:320,6,0	1/1:20,0:20:16.72:831,17,0	1/1:31,0:31:36.11:793,36,0	1/1:14,0:14:3.01:139,3,0	1/1:31,0:29:29.79:1046,30,0	1/1:21,0:19:3.48:66,3,0	1/1:16,3:18:6.17:208,6,0	1/1:11,2:15:10.28:351,10,0	0/1:15,0:15:0:0,0,0	0/0:30,0:30:45.14:0,45,1442	1/1:20,0:20:18.05:761,18,0	1/1:24,0:24:10.61:900,11,0	1/1:18,0:19:16.87:627,17,0	1/1:22,0:20:13.57:441,14,0	1/1:19,0:18:15.04:533,15,0	1/1:18,0:18:9.03:254,9,0	1/1:17,4:21:3.01:171,3,0	1/1:20,0:20:6.01:65,6,0	0/1:13,0:13:0.24:0,0,0	0/0:23,0:23:43.20:0,43,1335	0/0:30,0:32:37.35:0,37,1137	0/0:25,0:27:48.16:0,48,1611	0/0:12,0:13:9.95:0,10,354
chr10	20059073	.	A	AGT	1580.35	PASS	AB=0.892;AC=25;AF=0.521;AN=48;BaseQRankSum=-2.617;DP=588;FS=18.491;HRun=0;HaplotypeScore=108.9854;InbreedingCoeff=-0.1623;MQ=69.39;MQ0=15;MQRankSum=0.311;QD=3.50;ReadPosRankSum=-2.377;VQSLOD=0.4790;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:30:20.55:0,21,172	./.	0/1:35,0:25:0:0,0,0	./.	0/1:26,0:26:20.18:29,0,20	1/1:26,1:27:8.35:78,8,0	0/1:14,3:17:35.75:36,0,51	0/1:17,0:17:0:0,0,0	0/1:9,8:17:26.56:39,0,27	0/1:14,7:22:4.38:237,0,4	0/1:11,0:11:22.56:38,0,23	0/1:11,0:10:18.92:19,0,26	./.	0/1:13,0:13:22.41:44,0,22	0/0:19,0:22:16.67:0,17,100	1/1:9,3:13:3.01:45,3,0	0/1:18,1:20:24.80:185,0,25	0/1:24,4:29:60.32:60,0,161	0/1:19,4:20:17.56:161,0,18	0/1:11,7:18:24.06:61,0,24	1/1:19,7:25:3.01:45,3,0	1/1:11,6:18:12.04:179,12,0	1/1:17,0:23:6.83:77,7,0	0/1:31,15:49:86.12:394,0,86	0/0:10,0:12:20.71:0,21,184	0/1:33,0:32:0.70:1,0,37	0/0:19,0:19:26.80:0,27,270	./.
chr10	20064069	.	T	TCTTC	24375.75	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=10.209;DP=697;FS=4.852;HRun=0;HaplotypeScore=147.9458;InbreedingCoeff=0.9759;MQ=79.11;MQ0=1;MQRankSum=-17.511;QD=60.64;ReadPosRankSum=1.342;VQSLOD=6.6246;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,159,2886	0/0:7,0:7:18.03:0,18,307	0/0:30,0:30:74.25:0,74,1346	0/0:16,0:16:45.13:0,45,800	0/0:33,0:33:93.31:0,93,1733	1/1:7,19:27:60.16:1468,60,0	1/1:1,23:26:66.23:1696,66,0	0/0:36,0:36:99:0,99,1756	0/0:21,0:21:60.19:0,60,1097	1/1:6,18:27:69.24:1722,69,0	1/1:7,19:28:57.20:1454,57,0	1/1:2,30:33:90.28:2340,90,0	1/1:2,18:21:60.21:1533,60,0	1/1:2,27:32:87.21:2169,87,0	0/0:16,0:16:48.15:0,48,879	1/1:1,20:22:57.16:1428,57,0	1/1:7,23:32:63.22:1628,63,0	1/1:1,6:11:12.04:324,12,0	1/1:6,14:22:66.15:1533,66,0	1/1:4,24:28:69.24:1798,69,0	1/1:2,21:24:45.15:1042,45,0	1/1:3,32:34:99:2477,99,0	1/1:0,12:14:33.11:887,33,0	1/1:4,16:20:32.59:878,33,0	0/0:29,0:29:87.27:0,87,1581	0/0:23,0:23:5.40:0,5,1135	0/0:25,0:25:72.23:0,72,1315	0/0:5,0:5:15.05:0,15,285
chr10	20064614	.	CTCTT	C	4333.59	PASS	AC=32;AF=0.593;AN=54;BaseQRankSum=6.987;DP=344;FS=0.510;HRun=0;HaplotypeScore=62.8415;InbreedingCoeff=0.8760;MQ=76.05;MQ0=4;MQRankSum=-0.360;QD=29.28;ReadPosRankSum=4.545;VQSLOD=4.3823;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:63.17:0,63,1508	0/0:4,0:4:12.04:0,12,228	0/0:36,0:16:26.49:0,26,556	0/0:50,0:30:41.06:0,41,824	0/0:7,0:7:18.06:0,18,423	1/1:1,10:11:15.05:279,15,0	1/1:2,7:9:6.02:112,6,0	0/0:19,0:19:48.16:0,48,1163	0/0:11,0:11:33.10:0,33,732	1/1:0,8:8:24.08:431,24,0	1/1:0,9:9:15.05:279,15,0	1/1:1,5:6:6.02:112,6,0	1/1:2,5:7:9.03:168,9,0	1/1:1,3:4:9:133,9,0	0/0:8,0:8:24.08:0,24,636	1/1:0,10:10:15.05:279,15,0	1/1:2,16:18:1.67:316,2,0	1/1:0,5:5:12.04:224,12,0	1/1:2,6:8:18.06:312,18,0	1/1:1,13:14:36.08:598,36,0	1/1:4,16:20:20.26:493,20,0	1/1:0,7:7:18.06:335,18,0	1/1:1,4:5:6.02:112,6,0	1/1:2,5:7:9.03:150,9,0	0/0:6,0:6:15.05:0,15,366	0/0:17,0:17:45.15:0,45,1123	0/0:15,0:15:42.14:0,42,977	./.
chr10	20065102	.	TG	T	15972.88	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=16.149;DP=736;FS=0.560;HRun=1;HaplotypeScore=91.5245;InbreedingCoeff=0.9999;MQ=91.49;MQ0=0;MQRankSum=-2.040;QD=38.03;ReadPosRankSum=5.166;VQSLOD=5.0618;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:56:99:0,169,2624	0/0:15,0:15:45.13:0,45,693	0/0:26,0:26:78.26:0,78,1200	0/0:32,1:33:45.23:0,45,1216	0/0:26,0:26:78.24:0,78,1197	1/1:0,34:34:87.29:1216,87,0	1/1:0,25:25:72.24:1007,72,0	0/0:33,0:33:99:0,99,1561	0/0:21,0:21:63.15:0,63,974	1/1:0,32:32:93.31:1292,93,0	1/1:0,10:10:30.01:394,30,0	1/1:0,21:21:60.20:834,60,0	1/1:0,34:34:96.32:1341,96,0	1/1:0,17:17:48.16:671,48,0	0/0:29,0:29:87.27:0,87,1342	1/1:1,30:31:39.35:1127,39,0	1/1:0,44:44:99:1719,123,0	1/1:0,20:20:54.18:754,54,0	1/1:0,21:21:63.18:861,63,0	1/1:0,15:15:42.14:587,42,0	1/1:0,41:41:99:1635,117,0	1/1:0,28:28:72.11:940,72,0	1/1:0,20:20:51.17:713,51,0	1/1:0,27:27:63.21:881,63,0	0/0:18,0:18:51.16:0,51,792	0/0:25,1:26:36.31:0,36,1156	0/0:19,0:19:54.17:0,54,839	0/0:14,0:14:42.14:0,42,671
chr10	20066106	.	CA	C	2808.31	PASS	AB=0.762;AC=18;AF=0.321;AN=56;BaseQRankSum=-9.588;DP=473;FS=12.899;HRun=11;HaplotypeScore=89.5843;InbreedingCoeff=0.6927;MQ=49.17;MQ0=33;MQRankSum=8.141;QD=12.32;ReadPosRankSum=7.282;VQSLOD=1.6676;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,31:39:60.22:671,60,0	1/1:4,11:14:32.65:269,33,0	0/0:8,0:4:1.82:0,2,12	0/1:6,1:3:18.63:19,0,26	0/1:7,19:27:2.01:386,0,2	0/1:16,0:14:0.63:1,0,36	0/0:12,0:9:23.54:0,24,147	1/1:7,0:30:43.05:125,43,0	1/1:3,12:14:34.98:274,35,0	0/0:25,0:24:33.13:0,33,205	0/0:7,0:11:8.81:0,9,54	0/0:12,0:11:14.43:0,14,112	0/0:14,0:11:11.85:0,12,76	0/0:20,0:17:32.48:0,32,216	0/0:19,0:16:30.54:0,31,317	0/0:13,0:12:26.61:0,27,180	0/0:16,0:11:8.92:0,9,64	0/0:19,0:17:32.74:0,33,211	0/0:16,0:15:15.57:0,16,96	0/0:8,0:8:14.70:0,15,96	0/0:6,0:5:8.90:0,9,59	0/0:13,0:13:28.04:0,28,171	0/0:18,0:17:30.42:0,30,205	0/0:8,0:8:5.81:0,6,34	1/1:4,15:18:38.80:320,39,0	1/1:6,21:27:16.45:465,16,0	1/1:3,15:17:35.78:295,36,0	0/1:4,8:10:2.52:176,0,3
chr10	20066216	.	CA	C	11965.15	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=17.277;DP=600;FS=18.941;HRun=1;HaplotypeScore=99.5507;InbreedingCoeff=0.9987;MQ=86.71;MQ0=0;MQRankSum=-2.358;QD=37.86;ReadPosRankSum=4.322;VQSLOD=3.0750;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,144,2260	0/0:6,0:6:18.06:0,18,287	0/0:26,0:26:78.25:0,78,1201	0/0:16,0:16:40.16:0,40,706	0/0:23,0:23:69.22:0,69,1076	1/1:0,17:17:51.17:707,51,0	1/1:0,15:15:36.12:503,36,0	0/0:28,0:28:84.29:0,84,1341	0/0:23,0:23:69.24:0,69,1102	1/1:0,19:19:54.18:755,54,0	1/1:0,15:15:42.14:586,42,0	1/1:0,12:12:36.12:503,36,0	1/1:0,25:25:72.24:1005,72,0	1/1:0,22:22:60.20:828,60,0	0/0:34,0:34:99:0,102,1631	1/1:0,20:20:54.18:754,54,0	1/1:0,22:22:60.20:838,60,0	1/1:0,23:23:63.21:880,63,0	1/1:0,19:19:57.19:795,57,0	1/1:0,14:14:36.12:503,36,0	1/1:0,37:37:99:1382,99,0	1/1:0,24:24:63.21:879,63,0	1/1:0,14:14:30.10:418,30,0	1/1:0,18:18:45.15:628,45,0	0/0:20,0:20:57.15:0,57,881	0/0:25,0:25:75.26:0,75,1199	0/0:21,0:21:63.21:0,63,1005	0/0:13,0:13:39.10:0,39,576
chr10	20066464	.	C	CT	12725.64	PASS	AB=0.920;AC=33;AF=0.589;AN=56;BaseQRankSum=3.333;DP=715;FS=12.967;HRun=6;HaplotypeScore=82.2705;InbreedingCoeff=0.9241;MQ=78.55;MQ0=0;MQRankSum=-4.016;QD=28.53;ReadPosRankSum=2.554;VQSLOD=4.5567;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:75.91:0,76,929	0/0:7,0:7:15.03:0,15,153	0/0:23,0:23:38.97:0,39,434	0/0:21,0:21:46.88:0,47,464	0/0:20,0:20:51.11:0,51,519	1/1:1,21:22:51.15:642,51,0	1/1:3,17:20:51.16:642,51,0	0/0:44,0:44:99:0,117,1188	0/0:23,0:23:69.16:0,69,704	1/1:1,26:27:78.25:978,78,0	1/1:0,20:19:54.13:661,54,0	1/1:1,29:30:84.22:1038,84,0	1/1:4,24:28:72.23:906,72,0	1/1:2,22:24:60.19:755,60,0	0/0:36,0:36:93.16:0,93,933	1/1:2,26:28:38.61:800,39,0	1/1:3,25:28:66.21:829,66,0	1/1:2,23:25:63.20:792,63,0	1/1:1,22:23:66.19:815,66,0	1/1:2,16:18:45.14:566,45,0	1/1:2,21:23:57.18:717,57,0	1/1:4,33:37:96.31:1205,96,0	1/1:3,16:19:42.13:528,42,0	1/1:3,25:28:66.21:830,66,0	0/0:20,0:20:51.07:0,51,505	0/1:42,4:46:21.68:22,0,1063	0/0:27,0:27:75.15:0,75,754	0/0:9,0:9:24.02:0,24,235
chr10	20066816	.	A	AGTGCGTGTGTGTG	10235.98	PASS	AB=0.699;AC=28;AF=0.500;AN=56;BaseQRankSum=9.452;DP=717;FS=6.478;HRun=0;HaplotypeScore=222.7753;InbreedingCoeff=0.6311;MQ=64.23;MQ0=3;MQRankSum=-10.930;QD=25.27;ReadPosRankSum=-1.392;VQSLOD=2.9705;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:42:99:0,114,3474	0/0:15,0:15:39.10:0,39,1291	0/0:33,0:23:49.69:0,50,1102	0/0:31,0:24:48.92:0,49,1286	0/0:21,0:22:63.17:0,63,1759	1/1:7,0:36:27.09:1263,27,0	1/1:4,0:29:6.02:252,6,0	0/0:16,0:28:69.21:0,69,1262	0/0:20,0:22:63.19:0,63,2074	0/1:8,0:32:34.85:1123,0,35	1/1:9,0:21:18.06:873,18,0	1/1:7,0:25:17.97:866,18,0	1/1:2,0:18:21.02:1000,21,0	1/1:5,0:22:6.48:307,6,0	0/0:22,0:25:66.23:0,66,2439	1/1:5,1:35:11.77:590,12,0	1/1:5,0:25:18.06:812,18,0	0/1:3,0:11:26.26:216,0,26	0/1:9,0:18:57.25:887,0,57	1/1:6,0:16:6.49:278,6,0	1/1:11,0:38:10.95:438,11,0	1/1:8,0:26:17.02:786,17,0	1/1:1,0:16:12.04:491,12,0	0/0:9,0:25:1.36:0,1,3	0/0:28,0:29:81.26:0,81,2614	0/1:30,0:33:55.21:55,0,2544	0/0:28,0:30:84.21:0,84,2398	0/0:10,0:10:30.10:0,30,935
chr10	20068376	.	G	GTA	5161.14	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=15.712;DP=476;FS=1.210;HRun=0;HaplotypeScore=146.8538;InbreedingCoeff=0.9712;MQ=100.64;MQ0=0;MQRankSum=-15.374;QD=37.40;ReadPosRankSum=5.400;VQSLOD=6.5449;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:44:99:0,135,2192	0/0:16,0:16:48.16:0,48,783	0/0:29,0:29:81.23:0,81,1228	0/0:28,0:28:81.24:0,81,1271	0/0:27,0:27:75.23:0,75,1175	1/1:2,5:7:21.07:311,21,0	1/1:1,5:6:18.04:226,18,0	0/0:31,0:31:87.27:0,87,1348	0/0:24,0:24:69.24:0,69,1114	1/1:1,9:10:29.89:390,30,0	1/1:2,7:10:29.65:309,30,0	1/1:0,17:18:54.18:743,54,0	1/1:1,9:11:33.11:436,33,0	1/1:1,10:11:33.10:430,33,0	0/0:38,0:38:99:0,114,1825	1/1:2,8:10:27.08:350,27,0	1/1:2,4:6:11.77:134,12,0	1/1:0,3:3:9.03:130,9,0	1/1:1,5:6:17.65:224,18,0	1/1:0,9:9:27.09:364,27,0	1/1:1,3:5:9.03:131,9,0	1/1:0,10:10:30.10:401,30,0	1/1:0,10:10:30.10:401,30,0	1/1:0,5:6:12.04:183,12,0	0/0:22,0:22:63.22:0,63,1023	0/0:33,0:33:99:0,99,1588	0/0:37,0:37:99:0,111,1804	0/0:8,0:8:24.08:0,24,389
chr10	20068377	.	C	CACGCGTATTTTTA	35946.49	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=17.211;DP=586;FS=2.174;HRun=0;HaplotypeScore=247.8120;InbreedingCoeff=0.9948;MQ=91.58;MQ0=0;MQRankSum=-19.470;QD=146.12;ReadPosRankSum=2.903;VQSLOD=4.9977;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:45:99:0,135,5312	0/0:16,0:16:48.16:0,48,1986	0/0:29,0:29:84.24:0,84,2772	0/0:28,0:28:84.23:0,84,2886	0/0:26,0:26:78.24:0,78,2957	1/1:6,5:11:33.09:1632,33,0	1/1:12,5:17:48.16:2429,48,0	0/0:31,0:31:87.28:0,87,2810	0/0:25,0:25:72.21:0,72,2701	1/1:10,9:19:57.20:3120,57,0	1/1:14,8:22:57.14:2957,57,0	1/1:16,17:33:99:4958,99,0	1/1:4,9:14:42.14:2370,42,0	1/1:4,10:14:42.14:2243,42,0	0/0:37,0:37:99:0,111,4391	1/1:12,8:20:54.19:2917,54,0	1/1:11,4:15:36.11:1772,36,0	1/1:2,3:5:15.05:828,15,0	1/1:4,5:9:27.09:1485,27,0	1/1:6,9:15:45.15:2357,45,0	1/1:8,3:11:24.08:983,24,0	1/1:4,10:14:39.13:2274,39,0	1/1:8,10:18:54.19:2797,54,0	1/1:4,5:9:15.05:825,15,0	0/0:23,0:23:66.20:0,66,2492	0/0:34,0:34:96.32:0,96,3747	0/0:37,0:37:99:0,111,4483	0/0:8,0:8:24.08:0,24,910
chr10	20068731	.	AT	A	10676.02	PASS	AB=0.909;AC=33;AF=0.589;AN=56;BaseQRankSum=9.143;DP=648;FS=0.614;HRun=2;HaplotypeScore=69.6601;InbreedingCoeff=0.9245;MQ=89.35;MQ0=0;MQRankSum=-1.802;QD=29.99;ReadPosRankSum=3.509;VQSLOD=4.5164;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,123,1816	0/0:11,0:11:30.10:0,30,445	0/0:23,0:23:66.20:0,66,936	0/0:29,0:29:81.21:0,81,1134	0/0:23,0:23:69.22:0,69,1011	1/1:0,19:19:45.15:584,45,0	1/1:0,20:20:51.17:662,51,0	0/0:44,0:44:99:0,132,1917	0/0:25,0:25:69.23:0,69,1034	1/1:0,24:24:72.16:870,72,0	1/1:0,13:13:15.05:190,15,0	1/1:0,19:18:51.16:655,51,0	1/1:0,24:24:57.19:739,57,0	1/1:1,13:14:33.11:428,33,0	0/0:22,0:22:66.18:0,66,945	1/1:0,26:26:72.23:935,72,0	1/1:0,19:19:48.16:623,48,0	1/1:0,24:24:63.20:815,63,0	1/1:0,16:16:45.15:584,45,0	1/1:0,22:22:48.15:611,48,0	1/1:0,38:38:93.30:1208,93,0	1/1:0,21:21:54.18:701,54,0	1/1:0,16:16:30.08:389,30,0	1/1:0,21:21:51.17:662,51,0	0/0:26,0:26:78.25:0,78,1132	0/1:18,2:20:20.72:21,0,636	0/0:28,0:28:84.24:0,84,1226	0/0:20,0:20:60.20:0,60,897
chr10	20068854	.	TTCTCTCTCTCTCTC	T	840.06	PASS	AB=1.000;AC=14;AF=0.350;AN=40;BaseQRankSum=4.232;DP=543;FS=9.993;HRun=0;HaplotypeScore=202.2164;InbreedingCoeff=0.1560;MQ=69.15;MQ0=25;MQRankSum=-4.158;QD=4.52;ReadPosRankSum=-0.780;VQSLOD=1.7962;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	1/1:9,1:11:6.02:206,6,0	./.	./.	./.	0/1:21,0:20:13.06:13,0,187	0/0:14,0:13:12.04:0,12,204	0/0:34,0:34:14.96:0,15,224	./.	0/1:19,0:19:6.84:215,0,7	1/1:9,0:9:2.95:19,3,0	0/0:14,0:12:15.03:0,15,390	0/1:26,0:25:4.88:5,0,246	0/0:11,0:10:18.05:0,18,421	0/0:10,0:10:3.01:0,3,74	0/1:20,0:19:60.64:61,0,111	0/1:22,0:19:4.09:4,0,169	0/0:15,0:15:3.48:0,3,48	0/1:25,0:23:13.80:14,0,39	./.	0/0:23,0:22:6.02:0,6,140	0/0:10,0:10:6.02:0,6,159	0/0:14,0:14:3.01:0,3,71	0/0:24,0:24:11.53:0,12,180	./.	1/1:16,1:18:6.02:224,6,0	1/1:13,1:15:6.02:210,6,0	./.
chr10	20068904	.	CTCTCTCTCTGTGTGTG	C	4204.42	PASS	AB=1.000;AC=28;AF=0.560;AN=50;BaseQRankSum=6.795;DP=519;FS=40.177;HRun=0;HaplotypeScore=187.6382;InbreedingCoeff=0.2481;MQ=40.93;MQ0=48;MQRankSum=-3.087;QD=11.91;ReadPosRankSum=1.732;VQSLOD=1.4198;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:36:22.90:0,23,650	0/1:11,0:9:67.58:68,0,595	./.	./.	0/0:24,0:23:27.09:0,27,831	0/1:17,0:15:1.78:187,0,2	1/1:26,0:21:3.94:199,4,0	0/0:21,0:21:28.66:0,29,437	0/0:12,0:10:1.83:0,2,3	1/1:25,0:25:50.90:1232,51,0	1/1:15,0:14:3.01:48,3,0	0/1:24,0:21:99:117,0,100	1/1:21,0:18:29.89:546,30,0	0/1:18,0:16:66.55:116,0,67	0/0:13,0:13:15.52:0,16,511	1/1:8,12:18:5.87:210,6,0	1/1:23,0:19:18.71:341,19,0	1/1:18,0:17:16.51:387,17,0	0/1:15,0:13:3.62:281,0,4	1/1:15,0:13:3.01:70,3,0	1/1:15,0:13:3.21:80,3,0	0/1:17,0:16:39.97:61,0,40	./.	1/1:25,0:25:9.79:148,10,0	0/0:22,0:19:24.08:0,24,827	0/1:30,0:29:43.42:43,0,1695	0/1:18,0:18:70.71:71,0,967	0/0:16,0:8:19.42:0,19,557
chr10	20068912	.	CTGTGTGTG	C	2529.41	PASS	AC=26;AF=0.565;AN=46;BaseQRankSum=5.930;DP=547;FS=7.460;HRun=0;HaplotypeScore=154.7878;InbreedingCoeff=0.7368;MQ=41.63;MQ0=42;MQRankSum=-2.455;QD=10.08;ReadPosRankSum=1.627;VQSLOD=2.0867;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:40:27.09:0,27,835	0/0:14,0:12:30.10:0,30,806	./.	0/0:5,0:1:2.92:0,3,17	0/0:27,0:26:33.11:0,33,1008	1/1:13,5:16:1.25:3,1,0	1/1:19,7:22:6.99:173,7,0	0/0:22,0:22:30.50:0,31,654	./.	1/1:13,12:25:36.12:900,36,0	./.	1/1:15,7:19:6.02:138,6,0	1/1:13,7:19:12.04:270,12,0	1/1:8,5:13:6.02:133,6,0	0/0:15,0:15:18.53:0,19,580	1/1:19,0:18:2.76:68,3,0	1/1:16,8:20:4.34:142,4,0	1/1:7,12:18:15.05:368,15,0	1/1:12,4:14:12.04:296,12,0	1/1:6,8:14:3:70,3,0	1/1:10,5:14:3.01:76,3,0	1/1:9,5:14:3.01:67,3,0	./.	./.	0/0:26,0:23:30.10:0,30,995	0/0:32,0:31:69.33:0,69,1943	0/0:21,0:21:39.13:0,39,1168	0/0:14,0:8:18.06:0,18,512
chr10	20069775	.	GCTC	G	2922.99	PASS	AB=0.969;AC=20;AF=0.357;AN=56;BaseQRankSum=11.432;DP=451;FS=25.243;HRun=0;HaplotypeScore=91.1730;InbreedingCoeff=0.0159;MQ=70.68;MQ0=0;MQRankSum=-1.788;QD=9.34;ReadPosRankSum=11.485;VQSLOD=0.4319;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:56.85:0,57,552	0/0:7,0:7:15.02:0,15,185	0/0:11,0:11:23.01:0,23,207	0/0:13,0:13:18.32:0,18,197	0/0:12,0:13:26.75:0,27,279	0/1:18,0:18:77.95:130,0,78	0/1:24,0:24:18.18:238,0,18	0/0:11,0:11:24.01:0,24,229	0/0:7,0:8:21.06:0,21,396	0/1:14,0:14:60.45:60,0,198	0/1:10,0:10:50.13:59,0,50	1/1:24,2:26:69.88:475,70,0	1/1:20,1:21:54.92:386,55,0	0/1:24,2:26:25.89:259,0,26	0/0:13,0:13:31.84:0,32,368	1/1:20,1:21:2.89:235,3,0	0/1:21,0:21:2.86:196,0,3	1/1:9,0:9:0.83:109,1,0	0/1:16,1:17:99:145,0,108	0/1:10,0:10:21.60:22,0,109	0/1:29,3:32:33.59:263,0,34	0/1:13,3:16:84.97:172,0,85	0/1:14,0:14:50.99:83,0,51	0/1:34,0:34:40.39:263,0,40	0/0:9,0:11:13.38:0,13,144	0/0:11,0:11:23.78:0,24,278	0/0:8,0:8:19.58:0,20,189	0/0:8,0:8:17.51:0,18,210
chr10	20069777	.	TCCC	T	7769.39	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=1.232;DP=443;FS=50.186;HRun=12;HaplotypeScore=76.8617;InbreedingCoeff=0.9127;MQ=69.91;MQ0=0;MQRankSum=-0.544;QD=25.14;ReadPosRankSum=7.276;VQSLOD=-0.3941;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:24:26:0,26,220	0/0:5,0:6:8.99:0,9,107	0/0:11,0:11:9.99:0,10,122	0/0:12,0:12:15.41:0,15,144	0/0:9,0:12:11.99:0,12,121	1/1:5,13:18:33.07:417,33,0	1/1:4,18:24:51.01:604,51,0	0/0:11,0:11:2.97:0,3,20	0/0:8,0:8:18.06:0,18,324	1/1:9,3:12:11.92:151,12,0	1/1:3,7:10:11.92:151,12,0	1/1:2,24:26:72.23:906,72,0	1/1:1,20:22:63.11:776,63,0	1/1:7,18:25:51.11:643,51,0	0/0:7,0:13:29.06:0,29,268	1/1:3,17:21:54.09:662,54,0	1/1:2,16:20:45.06:548,45,0	1/1:1,8:9:24.05:303,24,0	1/1:7,10:17:33.05:400,33,0	1/1:6,5:11:8.83:91,9,0	1/1:11,19:31:59.66:750,60,0	1/1:9,7:16:27.04:328,27,0	1/1:3,9:13:20.99:245,21,0	1/1:6,26:34:63.16:793,63,0	0/0:7,0:9:6.73:0,7,50	0/0:9,0:11:10.26:0,10,120	0/0:6,0:9:20.49:0,20,193	0/0:6,0:8:16.26:0,16,176
chr10	20070661	.	C	CTCTCTG	6024.92	PASS	AB=0.886;AC=28;AF=0.500;AN=56;BaseQRankSum=3.854;DP=663;FS=81.866;HRun=0;HaplotypeScore=166.1656;InbreedingCoeff=0.6471;MQ=61.17;MQ0=17;MQRankSum=-10.888;QD=19.75;ReadPosRankSum=-1.995;VQSLOD=1.0261;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:93.29:0,93,1792	0/0:10,0:10:27.06:0,27,475	0/0:31,0:16:19.24:0,19,274	0/0:62,0:33:11.25:0,11,299	0/0:22,0:22:48.15:0,48,981	1/1:4,16:17:12.04:291,12,0	1/1:11,7:17:24.76:589,25,0	0/0:53,0:47:99:0,108,1947	0/0:28,0:28:70.93:0,71,1381	0/1:24,5:28:99:776,0,108	1/1:15,2:16:2.04:69,2,0	1/1:6,9:13:12.04:298,12,0	1/1:12,7:18:27.02:614,27,0	1/1:9,8:13:9.51:377,10,0	0/0:27,0:27:72.22:0,72,1503	0/1:16,4:17:75.49:373,0,75	1/1:8,2:10:6.02:193,6,0	0/1:8,0:5:23.31:34,0,23	1/1:8,6:12:26.44:536,26,0	1/1:22,12:31:51.16:1164,51,0	1/1:11,11:20:3.01:73,3,0	1/1:18,6:24:20.64:434,21,0	0/1:15,3:15:1.44:65,0,1	1/1:11,6:15:8.50:141,8,0	0/0:13,0:13:35.95:0,36,733	0/0:31,0:28:66.08:0,66,1024	0/0:31,0:31:84.27:0,84,1722	0/0:15,0:15:42.14:0,42,896
chr10	20070671	.	CTCTCTT	C	3056.03	PASS	AB=0.981;AC=20;AF=0.357;AN=56;BaseQRankSum=6.682;DP=686;FS=62.502;HRun=0;HaplotypeScore=186.6636;InbreedingCoeff=0.1360;MQ=51.82;MQ0=21;MQRankSum=-8.260;QD=9.86;ReadPosRankSum=-3.865;VQSLOD=-0.0927;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,107,3008	0/0:11,0:11:30.09:0,30,880	0/0:27,0:10:19.28:0,19,350	0/0:61,0:22:12.89:0,13,430	0/0:23,0:23:60.17:0,60,1828	1/1:20,0:17:3.89:199,4,0	1/1:17,2:17:6.87:374,7,0	0/0:58,0:50:99:0,141,3503	0/0:28,0:28:79.77:0,80,2318	0/1:33,2:34:99:224,0,575	0/1:17,0:14:14.35:36,0,14	1/1:17,0:13:12.04:187,12,0	0/1:20,0:19:99:322,0,151	0/1:17,0:13:31.98:183,0,32	0/0:26,0:26:75.26:0,75,2559	0/1:22,1:20:99:206,0,150	0/1:11,0:11:85.26:91,0,85	0/0:9,0:5:1.62:0,2,65	0/1:10,0:7:99:108,0,136	1/1:37,3:37:10.92:812,11,0	1/1:15,0:13:3.01:53,3,0	0/1:26,1:27:22.42:296,0,22	0/1:22,0:19:35.44:35,0,75	0/1:16,1:15:4.10:105,0,4	0/0:14,0:14:40.69:0,41,1271	0/0:30,0:27:81.18:0,81,2186	0/0:35,0:35:99:0,102,3117	0/0:17,0:17:51.17:0,51,1544
chr10	20070743	.	GTC	G	619.21	PASS	AB=0.820;AC=10;AF=0.200;AN=50;BaseQRankSum=7.384;DP=671;FS=26.288;HRun=0;HaplotypeScore=152.2192;InbreedingCoeff=-0.0492;MQ=36.70;MQ0=61;MQRankSum=-6.083;QD=2.54;ReadPosRankSum=-0.960;VQSLOD=1.1853;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:37:72.20:0,72,1157	0/0:15,0:15:36.09:0,36,537	./.	./.	0/0:27,0:25:60.66:0,61,988	0/1:25,3:17:10.91:86,0,11	1/1:22,2:12:5.49:39,5,0	0/0:51,0:44:99:0,111,1604	0/0:36,1:29:36.46:0,36,532	0/1:20,12:26:99:277,0,188	0/1:19,7:22:28.51:56,0,29	0/0:14,1:8:3.01:0,3,51	0/0:16,0:14:12.03:0,12,152	0/1:16,3:14:16.81:64,0,17	0/0:21,0:18:29.56:0,30,645	0/0:25,2:24:10.04:0,10,95	0/0:11,0:11:11.93:0,12,171	0/0:12,1:8:15.05:0,15,243	0/1:15,2:9:18.45:18,0,119	0/1:20,8:27:78.16:103,0,78	0/0:19,0:13:13.81:0,14,160	0/1:25,6:26:59.49:59,0,71	0/1:27,12:34:16.59:54,0,17	./.	0/0:28,0:25:54.18:0,54,907	0/0:32,0:30:84.26:0,84,1363	0/0:29,0:27:69.21:0,69,1125	0/0:24,0:23:62.67:0,63,990
chr10	20070747	.	CTCTCTG	C	337.90	PASS	AB=0.956;AC=14;AF=0.280;AN=50;BaseQRankSum=8.409;DP=676;FS=31.600;HRun=0;HaplotypeScore=178.9392;InbreedingCoeff=-0.0579;MQ=37.00;MQ0=64;MQRankSum=-7.453;QD=1.13;ReadPosRankSum=-1.835;VQSLOD=1.1979;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:36:72.19:0,72,2012	0/0:15,0:15:33.96:0,34,805	./.	./.	0/0:26,0:25:63.67:0,64,1688	0/1:26,0:15:35.40:35,0,82	1/1:25,0:13:2.16:16,2,0	0/0:51,0:43:99:0,105,2151	0/0:39,0:31:45.37:0,45,467	0/1:29,1:24:99:119,0,191	0/1:22,4:22:46.36:46,0,49	0/0:14,1:8:3.01:0,3,84	0/0:13,1:12:5.97:0,6,71	0/1:17,2:14:17.61:39,0,18	0/0:21,0:18:41.69:0,42,1105	1/1:24,2:23:11.64:74,12,0	0/1:11,0:11:11.36:11,0,166	0/0:13,0:8:14.26:0,14,420	0/1:15,1:9:39.21:39,0,141	0/1:29,1:29:50.89:51,0,171	0/1:20,0:13:1.10:1,0,213	0/1:30,2:27:31.23:31,0,139	0/1:38,1:32:21.24:21,0,97	./.	0/0:28,0:24:54.18:0,54,1513	0/0:34,0:32:90.17:0,90,2179	0/0:30,0:28:69.23:0,69,1869	0/0:29,0:28:78:0,78,1894
chr10	20070777	.	CTCTG	C	92.12	PASS	AB=0.918;AC=6;AF=0.115;AN=52;BaseQRankSum=6.237;DP=547;FS=0.000;HRun=0;HaplotypeScore=105.2243;InbreedingCoeff=0.0957;MQ=40.76;MQ0=44;MQRankSum=-5.363;QD=1.14;ReadPosRankSum=-1.613;VQSLOD=1.7999;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:39:79.64:0,80,1914	0/0:15,0:15:33.11:0,33,828	./.	./.	0/0:25,0:23:57.17:0,57,1408	0/0:18,0:11:6.02:0,6,82	1/1:10,1:6:3.01:35,3,0	0/0:54,0:40:91.90:0,92,1836	0/0:37,0:30:57.19:0,57,1399	0/1:11,2:9:16.16:16,0,89	0/0:14,0:12:2.99:0,3,32	0/0:9,0:4:3.01:0,3,36	0/0:7,0:5:2.22:0,2,7	0/0:8,0:8:2.88:0,3,15	0/0:31,0:28:72.24:0,72,1575	0/0:14,0:15:1.07:0,1,77	0/0:8,0:8:5.73:0,6,35	0/0:12,0:9:15.05:0,15,243	0/0:9,0:1:3.01:0,3,38	0/1:14,2:16:73.80:74,0,132	0/0:17,0:11:2.68:0,3,132	0/1:20,2:21:36.68:73,0,37	0/0:17,0:13:5.91:0,6,66	0/1:19,0:9:0.01:0,0,0	0/0:28,0:25:54.18:0,54,1337	0/0:37,0:36:99:0,102,2238	0/0:26,0:25:63.21:0,63,1472	0/0:32,0:32:87.29:0,87,2230
chr10	20070823	.	CTT	C	513.31	PASS	AB=0.777;AC=12;AF=0.261;AN=46;BaseQRankSum=7.821;DP=489;FS=7.827;HRun=3;HaplotypeScore=87.4236;InbreedingCoeff=0.4311;MQ=53.40;MQ0=11;MQRankSum=-7.444;QD=7.78;ReadPosRankSum=2.411;VQSLOD=0.1158;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,107,1760	0/0:14,0:14:42.14:0,42,810	0/0:45,0:13:32.49:0,32,441	0/0:70,0:14:15.88:0,16,224	0/0:19,0:19:57.20:0,57,1091	1/1:2,5:4:5.99:48,6,0	0/0:3,1:2:2.98:0,3,21	0/0:42,0:37:99:0,105,1855	0/0:27,1:27:65.69:0,66,1243	0/1:9,5:14:44.72:174,0,45	1/1:2,6:8:8.97:88,9,0	./.	1/1:1,1:2:6.02:86,6,0	./.	0/0:28,0:28:84.19:0,84,1471	0/0:5,0:5:5.95:0,6,76	./.	0/1:2,0:2:1.38:18,0,1	./.	0/1:7,6:13:18.63:106,0,19	./.	0/1:6,5:11:50.64:51,0,78	1/1:4,5:9:3.13:84,3,0	0/0:5,1:3:0.89:0,1,2	0/0:23,0:22:63.17:0,63,1163	0/0:33,0:33:93.30:0,93,1759	0/0:25,0:25:74.97:0,75,1324	0/0:29,0:29:87.23:0,87,1525
chr10	20070835	.	TTCTCTCTC	T	1819.09	PASS	AB=1.000;AC=18;AF=0.391;AN=46;BaseQRankSum=11.459;DP=479;FS=12.325;HRun=0;HaplotypeScore=132.7307;InbreedingCoeff=0.6846;MQ=55.60;MQ0=14;MQRankSum=-10.572;QD=22.74;ReadPosRankSum=-3.586;VQSLOD=1.8249;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:86.10:0,86,2938	0/0:13,0:13:36.11:0,36,1136	0/0:51,0:15:34.52:0,35,692	0/0:71,0:18:11.46:0,11,311	0/0:16,0:16:42.08:0,42,1148	1/1:3,4:5:11.71:175,12,0	./.	0/0:37,0:37:90.25:0,90,2216	0/0:28,0:27:70.68:0,71,2216	1/1:7,5:11:32.99:552,33,0	1/1:6,5:11:23.45:228,23,0	./.	0/1:3,0:3:4.67:5,0,15	1/1:1,0:1:2.97:20,3,0	0/0:29,0:29:84.29:0,84,2776	0/1:5,0:5:17.13:25,0,17	./.	0/1:4,0:4:3.44:30,0,3	./.	1/1:6,6:12:32.87:440,33,0	./.	1/1:4,5:9:20.89:262,21,0	1/1:6,5:11:5.56:254,6,0	0/1:5,0:1:0:0,0,0	0/0:24,0:23:66.19:0,66,1868	0/0:26,0:26:75.20:0,75,2393	0/0:26,0:26:77.04:0,77,2474	0/0:24,0:24:69.12:0,69,1715
chr10	20070871	.	CTTTG	C	1086.04	PASS	AB=0.738;AC=14;AF=0.259;AN=54;BaseQRankSum=7.793;DP=461;FS=19.651;HRun=0;HaplotypeScore=133.6455;InbreedingCoeff=-0.0643;MQ=53.25;MQ0=10;MQRankSum=-7.475;QD=9.28;ReadPosRankSum=2.753;VQSLOD=1.8891;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:37:99:0,108,2547	0/0:12,0:12:36.11:0,36,950	0/0:16,0:4:5.83:0,6,137	0/0:38,0:14:21.42:0,21,297	0/0:19,0:19:54.19:0,54,1465	0/1:5,3:8:85.78:86,0,102	0/0:4,0:4:0:0,0,0	0/0:45,0:45:99:0,132,3377	0/0:30,0:29:63.83:0,64,1859	0/1:16,5:20:99:182,0,637	0/1:11,3:14:21.69:22,0,180	1/1:1,1:2:3.01:53,3,0	0/1:2,1:3:13.51:47,0,14	0/0:1,2:3:2.97:0,3,20	0/0:28,0:28:78.25:0,78,1974	0/1:1,5:6:8.40:189,0,8	0/0:2,0:2:3.01:0,3,38	0/1:2,2:5:31.07:90,0,31	0/1:4,2:4:64.92:79,0,65	0/1:13,2:15:61.37:61,0,231	./.	0/1:10,5:15:99:177,0,117	0/1:11,7:18:99:194,0,118	1/1:1,3:1:3.01:54,3,0	0/0:26,0:26:78.22:0,78,1961	0/0:23,0:22:66.20:0,66,1623	0/0:33,0:33:61.41:0,61,2217	0/0:16,0:16:48.16:0,48,1216
chr10	20070889	.	CTCTG	C	1697.64	PASS	AB=0.768;AC=23;AF=0.442;AN=52;BaseQRankSum=11.389;DP=480;FS=25.340;HRun=0;HaplotypeScore=148.6246;InbreedingCoeff=0.4232;MQ=50.01;MQ0=14;MQRankSum=-9.264;QD=11.24;ReadPosRankSum=2.374;VQSLOD=1.6871;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:38:95.69:0,96,2251	0/0:15,0:15:42.10:0,42,898	0/0:10,0:3:8.89:0,9,93	0/0:36,0:11:0.79:0,1,45	0/0:27,0:27:78.22:0,78,1792	1/1:6,2:8:12.04:171,12,0	1/1:6,2:7:2.94:18,3,0	0/0:42,0:38:99:0,99,2165	0/0:34,0:32:66.98:0,67,1812	0/1:14,8:21:18.79:585,0,19	0/1:13,6:18:15.96:112,0,16	1/1:4,0:4:3.01:33,3,0	0/1:4,1:5:24.08:24,0,26	./.	0/0:23,0:23:66.23:0,66,1708	1/1:15,1:16:17.91:225,18,0	1/1:2,1:3:3.01:51,3,0	1/1:5,1:5:9.02:114,9,0	1/1:6,0:2:5.95:42,6,0	0/1:14,7:21:65.38:144,0,65	./.	0/1:9,4:13:36.22:127,0,36	1/1:11,4:15:15.05:194,15,0	1/1:5,0:3:2.50:37,3,0	0/0:25,0:24:72.15:0,72,1668	0/0:24,0:23:69.15:0,69,1493	0/0:24,0:24:59.90:0,60,1643	0/0:13,0:13:33.11:0,33,865
chr10	20070893	.	G	GTC	2580.30	PASS	AC=28;AF=0.538;AN=52;BaseQRankSum=11.162;DP=485;FS=13.152;HRun=0;HaplotypeScore=139.4702;InbreedingCoeff=0.7822;MQ=47.81;MQ0=12;MQRankSum=-6.338;QD=16.23;ReadPosRankSum=0.615;VQSLOD=3.2086;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,1:38:91.46:0,91,1193	0/0:14,0:14:42.13:0,42,553	0/0:12,0:5:5.93:0,6,55	0/0:31,0:11:10.07:0,10,97	0/0:28,0:28:78.26:0,78,1055	1/1:4,5:9:0.24:106,0,0	1/1:6,2:7:3.01:36,3,0	0/0:37,0:33:84.26:0,84,1119	0/0:33,1:32:71.78:0,72,969	1/1:15,9:24:21.56:575,22,0	1/1:15,5:19:17.73:262,18,0	1/1:1,3:4:3.01:52,3,0	1/1:2,3:5:9.03:158,9,0	./.	0/0:23,0:23:66.22:0,66,905	1/1:3,15:18:24.06:354,24,0	1/1:2,1:3:1.25:3,1,0	1/1:3,3:5:2.51:90,3,0	1/1:4,2:2:6.02:105,6,0	1/1:10,8:18:20.14:356,20,0	./.	1/1:7,8:15:21.05:339,21,0	1/1:9,8:17:21.04:286,21,0	1/1:2,4:4:3.01:52,3,0	0/0:25,0:24:69.21:0,69,927	0/0:28,0:27:63.19:0,63,842	0/0:24,0:24:65.89:0,66,871	0/0:12,0:12:33.11:0,33,452
chr10	20070972	.	TTTCA	T	615.67	PASS	AB=0.955;AC=28;AF=0.500;AN=56;BaseQRankSum=11.845;DP=535;FS=58.973;HRun=0;HaplotypeScore=170.8394;InbreedingCoeff=0.4579;MQ=59.70;MQ0=11;MQRankSum=-10.270;QD=2.34;ReadPosRankSum=3.511;VQSLOD=1.0532;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,102,2428	0/0:10,0:10:27.09:0,27,654	0/0:32,0:13:13.57:0,14,311	0/1:51,0:26:3.20:3,0,521	0/0:31,0:31:86.12:0,86,2171	1/1:8,0:8:1.87:6,2,0	1/1:20,1:22:18.53:96,19,0	0/0:30,0:30:90.29:0,90,1790	0/0:23,0:23:66.16:0,66,1511	1/1:13,0:12:1.69:48,2,0	0/1:16,2:18:27.71:49,0,28	1/1:12,0:12:11.18:49,11,0	1/1:7,0:7:14.68:65,15,0	1/1:9,0:9:7.07:20,7,0	0/0:20,0:20:60.21:0,60,1576	1/1:18,2:20:12.29:136,12,0	1/1:7,1:9:9.99:77,10,0	1/1:4,0:5:4.59:15,5,0	1/1:5,0:6:7.62:74,8,0	0/1:23,0:25:45.35:49,0,45	0/0:7,0:7:2.92:0,3,17	0/1:17,2:19:41.75:61,0,42	0/1:16,0:16:4.11:4,0,34	1/1:10,1:11:2.42:45,2,0	0/0:23,0:23:66.81:0,67,1545	0/0:29,0:29:84.01:0,84,1794	0/0:30,0:30:90.31:0,90,2310	0/1:9,0:9:6.49:6,0,646
chr10	20071030	.	CACACAT	C	1814.59	PASS	AB=1.000;AC=28;AF=0.500;AN=56;BaseQRankSum=11.704;DP=587;FS=2.004;HRun=0;HaplotypeScore=179.2565;InbreedingCoeff=0.6725;MQ=51.73;MQ0=17;MQRankSum=-7.199;QD=6.34;ReadPosRankSum=1.840;VQSLOD=2.8612;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:70.85:0,71,1146	0/0:11,0:11:27.06:0,27,538	0/0:34,0:20:34.94:0,35,330	0/0:46,0:21:47.21:0,47,494	0/0:28,0:27:64.63:0,65,1401	0/1:20,0:20:57.76:96,0,58	1/1:16,2:18:4.86:239,5,0	0/0:14,0:14:42.04:0,42,442	0/0:28,0:27:41.10:0,41,559	0/1:19,0:18:39.61:181,0,40	1/1:14,2:16:10.73:157,11,0	1/1:18,0:18:17.49:105,17,0	1/1:14,0:14:9.39:48,9,0	1/1:9,0:9:8.53:44,9,0	0/0:20,0:20:27:0,27,946	1/1:19,0:19:29.80:187,30,0	1/1:15,0:15:4.38:104,4,0	1/1:13,0:12:23.67:163,24,0	0/1:13,0:12:13.59:79,0,14	1/1:19,1:19:23.28:181,23,0	1/1:26,0:26:8.97:71,9,0	0/1:24,0:22:2.07:57,0,2	1/1:22,1:21:23.98:199,24,0	1/1:18,1:18:15.72:112,16,0	0/0:19,0:19:18.02:0,18,541	0/0:25,0:25:58.41:0,58,1309	0/0:31,0:31:86.93:0,87,1598	0/0:10,0:10:30.01:0,30,456
chr10	20071032	.	CACAT	C	4892.61	PASS	AB=0.775;AC=30;AF=0.536;AN=56;BaseQRankSum=9.852;DP=597;FS=2.969;HRun=0;HaplotypeScore=156.1759;InbreedingCoeff=0.7124;MQ=50.60;MQ0=17;MQRankSum=-6.782;QD=15.48;ReadPosRankSum=0.897;VQSLOD=4.8140;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:69.96:0,70,899	0/0:11,0:11:27:0,27,422	0/0:32,0:18:34.94:0,35,330	0/0:46,0:21:47.21:0,47,494	0/0:29,0:28:32.38:0,32,1017	0/1:12,8:20:22.34:364,0,22	1/1:14,4:18:23.17:257,23,0	0/0:16,0:16:11.93:0,12,369	0/0:28,0:27:17.67:0,18,401	1/1:16,3:18:45.73:441,46,0	1/1:13,5:18:14.93:191,15,0	1/1:14,5:19:20.99:290,21,0	1/1:13,2:15:20.86:218,21,0	1/1:7,3:10:11.96:184,12,0	0/0:23,0:23:5.87:0,6,650	1/1:13,6:19:31.56:464,32,0	1/1:9,5:14:24.75:318,25,0	0/1:3,10:12:5.24:335,0,5	0/1:10,2:11:3.41:201,0,3	1/1:10,9:18:24.08:429,24,0	1/1:1,25:26:9.03:170,9,0	1/1:17,8:23:20.03:280,20,0	1/1:13,11:22:24.34:386,24,0	1/1:13,7:19:20.57:343,21,0	0/0:20,0:20:21.43:0,21,421	0/1:24,1:25:22.61:23,0,905	0/0:31,0:31:69.40:0,69,1161	0/0:10,0:10:29.86:0,30,359
chr10	20071036	.	T	TAC	85.93	PASS	AB=1.000;AC=6;AF=0.115;AN=52;BaseQRankSum=-1.190;DP=611;FS=10.490;HRun=0;HaplotypeScore=165.2306;InbreedingCoeff=0.3072;MQ=48.85;MQ0=20;MQRankSum=0.204;QD=1.18;ReadPosRankSum=-2.500;VQSLOD=1.5500;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:38:22.98:0,23,186	0/1:11,0:11:28.12:28,0,82	./.	./.	0/0:27,0:27:35.25:0,35,286	0/0:21,0:21:16.53:0,17,87	0/0:18,0:18:11.02:0,11,50	1/1:17,0:17:4.29:20,4,0	1/1:14,12:28:13.82:128,14,0	0/0:20,0:18:4.52:0,5,23	0/0:17,0:17:8.22:0,8,36	0/0:18,0:18:10.76:0,11,47	0/0:13,0:13:5.48:0,5,24	0/0:11,0:11:8.32:0,8,38	0/0:24,0:25:41.90:0,42,361	0/0:17,0:17:18.50:0,19,81	0/1:16,0:16:29.19:29,0,33	0/0:13,0:12:5.80:0,6,60	0/0:12,0:11:4.95:0,5,24	0/0:22,0:21:21.03:0,21,91	0/0:28,0:27:8.23:0,8,37	0/0:28,0:25:13.48:0,13,59	0/0:25,0:23:20.55:0,21,88	0/0:22,0:21:12.61:0,13,60	0/0:19,0:20:22.30:0,22,212	0/0:26,0:26:4.25:0,4,222	0/0:26,0:30:0.21:0,0,294	0/0:8,0:10:11.52:0,12,83
chr10	20072046	.	GACAGCT	G	11282.64	PASS	AB=0.554;AC=29;AF=0.518;AN=56;BaseQRankSum=14.787;DP=521;FS=0.795;HRun=0;HaplotypeScore=115.6986;InbreedingCoeff=0.8319;MQ=54.69;MQ0=1;MQRankSum=-14.647;QD=43.56;ReadPosRankSum=2.079;VQSLOD=4.5001;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,117,4047	0/0:13,0:13:33.11:0,33,1161	0/0:23,0:19:52.91:0,53,1477	0/0:23,0:19:54.19:0,54,1613	0/0:32,0:32:87.30:0,87,3029	1/1:0,16:16:36.12:839,36,0	1/1:2,15:17:24.08:559,24,0	0/0:27,0:27:75.25:0,75,2453	0/0:9,0:9:21.07:0,21,700	1/1:1,15:16:45.15:1024,45,0	1/1:3,16:19:33.11:751,33,0	1/1:0,9:9:21.07:489,21,0	1/1:0,14:14:33.07:719,33,0	1/1:1,16:17:33.11:769,33,0	0/0:21,0:21:54.19:0,54,1823	1/1:4,17:21:36.12:839,36,0	0/1:6,17:23:16.75:933,0,17	0/1:5,17:22:14.72:867,0,15	1/1:1,14:15:42.11:881,42,0	1/1:0,22:22:51.18:1158,51,0	0/1:1,11:11:0.01:0,0,0	1/1:1,7:8:18.06:419,18,0	1/1:2,14:16:30.10:684,30,0	1/1:4,8:12:15.05:349,15,0	0/0:10,0:9:27.09:0,27,909	0/0:28,0:28:78.25:0,78,2655	0/0:23,0:23:66.23:0,66,2320	0/0:14,0:14:39.13:0,39,1371
chr10	20073639	.	GA	G	9797.91	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=17.861;DP=742;FS=6.971;HRun=8;HaplotypeScore=102.1932;InbreedingCoeff=0.9991;MQ=87.59;MQ0=0;MQRankSum=-2.362;QD=24.25;ReadPosRankSum=2.711;VQSLOD=4.9769;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:62,0:62:99:0,171,1995	0/0:9,0:9:24.07:0,24,290	0/0:25,0:25:48.56:0,49,538	0/0:31,0:31:66.95:0,67,726	0/0:25,0:25:63.17:0,63,740	1/1:3,23:26:69.10:666,69,0	1/1:4,41:45:99:1014,105,0	0/0:30,0:30:66.56:0,67,928	0/0:32,0:32:87.19:0,87,989	1/1:3,12:15:36.05:348,36,0	1/1:7,16:23:48.03:463,48,0	1/1:4,24:28:69.11:666,69,0	1/1:3,29:32:81.13:782,81,0	1/1:3,15:18:45.07:435,45,0	0/0:34,0:34:93.25:0,93,1108	1/1:1,18:19:20.85:485,21,0	1/1:1,29:30:81.13:782,81,0	1/1:2,26:28:78.12:753,78,0	1/1:1,15:16:45.04:424,45,0	1/1:2,17:19:48.07:462,48,0	1/1:2,25:27:69.11:666,69,0	1/1:6,15:21:48.07:461,48,0	1/1:5,17:22:48.07:463,48,0	1/1:1,34:35:96.15:927,96,0	0/0:18,0:18:51.16:0,51,616	0/0:26,0:26:69.21:0,69,834	0/0:29,0:29:84.26:0,84,1015	0/0:17,0:17:45.13:0,45,541
chr10	20075863	.	CA	C	904.45	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-2.217;DP=665;FS=3.341;HRun=4;HaplotypeScore=132.1559;InbreedingCoeff=0.9953;MQ=70.40;MQ0=0;MQRankSum=1.136;QD=29.18;ReadPosRankSum=-4.355;VQSLOD=1.0306;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,108,1460	0/0:7,0:7:21.07:0,21,292	0/0:26,0:25:37.01:0,37,853	0/0:33,0:33:73.09:0,73,1062	0/0:31,0:31:78.12:0,78,1007	0/0:17,0:17:48.15:0,48,657	0/0:27,0:27:75.18:0,75,995	1/1:2,29:31:87.22:999,87,0	0/0:12,0:12:30.07:0,30,399	0/0:27,0:27:72.23:0,72,991	0/0:23,0:23:60.11:0,60,793	0/0:21,0:21:54.11:0,54,731	0/0:23,0:23:69.23:0,69,965	0/0:29,0:29:84.28:0,84,1175	0/0:20,0:20:54.18:0,54,756	0/0:20,0:20:60.20:0,60,840	0/0:28,0:28:69.22:0,69,949	0/0:20,0:20:60.11:0,60,792	0/0:34,0:34:93.28:0,93,1268	0/0:22,0:22:60.14:0,60,800	0/0:30,0:30:90.27:0,90,1224	0/0:17,0:17:45.14:0,45,613	0/0:21,0:21:54.18:0,54,754	0/0:30,0:30:84.28:0,84,1175	0/0:22,0:22:57.19:0,57,797	0/0:19,0:19:54.18:0,54,755	0/0:22,0:22:66.21:0,66,909	0/0:14,0:14:39.13:0,39,545
chr10	20076056	.	A	ATT	9967.73	PASS	AB=0.947;AC=33;AF=0.589;AN=56;BaseQRankSum=-0.032;DP=466;FS=10.317;HRun=8;HaplotypeScore=185.5449;InbreedingCoeff=0.9360;MQ=70.88;MQ0=0;MQRankSum=-2.460;QD=35.60;ReadPosRankSum=-0.773;VQSLOD=2.8485;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:20:48.07:0,48,523	0/0:7,0:7:18.04:0,18,199	0/0:14,0:14:17.84:0,18,167	0/0:13,0:12:16.48:0,16,189	0/0:22,0:22:53.72:0,54,578	1/1:3,6:10:23.57:326,24,0	1/1:4,13:17:42.01:566,42,0	0/0:32,0:32:75.11:0,75,800	0/0:10,0:10:21.04:0,21,234	1/1:1,16:17:48.15:739,48,0	1/1:8,17:26:56.65:812,57,0	1/1:1,17:18:54.14:829,54,0	1/1:3,16:19:57.04:794,57,0	1/1:8,16:24:54.18:848,54,0	0/0:11,0:11:30.07:0,30,334	1/1:3,8:11:33.03:455,33,0	1/1:2,10:12:36.05:514,36,0	1/1:1,10:12:24.05:476,24,0	1/1:2,6:8:18.03:259,18,0	1/1:2,20:22:60.12:854,60,0	1/1:2,13:15:39.13:602,39,0	1/1:5,18:23:61.55:885,62,0	1/1:1,11:13:36.03:515,36,0	1/1:6,9:15:36:490,36,0	0/0:18,0:18:39.06:0,39,435	0/1:17,1:18:5.54:6,0,392	0/0:25,0:25:66.17:0,66,735	0/0:12,0:12:36.06:0,36,379
chr10	20076116	.	GGA	G	4726.42	PASS	AB=0.500;AC=50;AF=0.926;AN=54;BaseQRankSum=-0.704;DP=281;FS=1.141;HRun=0;HaplotypeScore=434.1996;InbreedingCoeff=0.1247;MQ=32.48;MQ0=0;MQRankSum=-2.112;QD=17.19;ReadPosRankSum=2.981;VQSLOD=4.4150;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,10:10:12.50:123,12,0	1/1:0,9:9:25.74:196,26,0	1/1:2,0:2:1.82:5,2,0	0/0:1,2:1:0:0,0,0	1/1:1,22:23:16.87:142,17,0	1/1:0,9:9:15.02:151,15,0	0/1:0,14:14:29.66:134,0,30	1/1:0,1:1:3.01:34,3,0	1/1:0,13:13:25.92:256,26,0	1/1:0,12:12:28.66:281,29,0	1/1:0,17:17:0.06:169,0,0	1/1:0,13:13:31.11:263,31,0	1/1:0,15:14:23.20:258,23,0	1/1:0,13:13:20.29:226,20,0	1/1:0,10:10:18.04:188,18,0	1/1:0,12:12:32.22:289,32,0	1/1:0,6:6:8.25:92,8,0	1/1:0,3:3:8.98:83,9,0	1/1:1,2:3:5.91:50,6,0	0/1:0,12:12:3.13:110,0,3	./.	1/1:0,16:16:13.67:255,14,0	1/1:0,10:10:20:175,20,0	1/1:0,2:2:2.60:12,3,0	1/1:0,16:16:40.49:379,40,0	1/1:0,9:9:20.58:192,21,0	1/1:0,17:17:47.49:459,47,0	1/1:0,8:8:21.82:205,22,0
chr10	20076142	.	GA	G	4998.26	PASS	AB=0.525;AC=51;AF=0.944;AN=54;BaseQRankSum=0.095;DP=390;FS=4.595;HRun=2;HaplotypeScore=674.8304;InbreedingCoeff=0.3964;MQ=31.43;MQ0=0;MQRankSum=0.101;QD=12.85;ReadPosRankSum=0.733;VQSLOD=1.0007;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,11:10:12.55:145,13,0	1/1:2,6:8:16.48:83,16,0	0/0:1,0:1:2.80:0,3,13	./.	0/1:3,29:32:8.06:37,0,8	1/1:0,10:10:23.34:202,23,0	1/1:3,10:13:13.55:138,14,0	1/1:5,16:21:41.40:225,41,0	1/1:0,14:14:31.77:233,32,0	1/1:2,15:17:40.32:293,40,0	1/1:6,19:25:29.82:185,30,0	1/1:2,16:18:39.55:317,40,0	1/1:3,15:17:30.22:246,30,0	1/1:2,19:21:49.02:362,49,0	1/1:2,14:16:34.12:249,34,0	1/1:0,13:13:33.77:268,34,0	1/1:0,8:8:13.05:95,13,0	1/1:3,3:6:10.76:79,11,0	1/1:1,3:3:5.95:57,6,0	1/1:1,13:14:18.47:117,18,0	1/1:0,4:4:2.04:6,2,0	1/1:5,14:19:21.29:223,21,0	1/1:4,15:19:28.48:201,28,0	1/1:1,2:3:1.58:5,2,0	1/1:3,20:23:52.64:409,53,0	1/1:6,14:20:40.03:300,40,0	1/1:1,20:21:46.56:383,47,0	1/1:0,11:11:19.20:142,19,0
chr10	20076155	.	AT	A	9141.69	PASS	AC=52;AF=0.963;AN=54;BaseQRankSum=0.918;DP=415;FS=5.211;HRun=2;HaplotypeScore=666.4803;InbreedingCoeff=0.4447;MQ=37.89;MQ0=0;MQRankSum=-1.003;QD=22.30;ReadPosRankSum=2.123;VQSLOD=0.2970;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,12:11:15.93:133,16,0	1/1:1,7:8:17.29:152,17,0	0/0:3,0:3:1.08:0,1,4	./.	1/1:1,33:34:61.94:714,62,0	1/1:0,11:11:23.61:305,24,0	1/1:0,14:14:16.42:228,16,0	1/1:2,20:22:47.05:483,47,0	1/1:2,12:14:24.89:259,25,0	1/1:1,17:18:43.20:429,43,0	1/1:0,26:26:37.15:435,37,0	1/1:0,19:19:46.70:539,47,0	1/1:0,15:14:24.70:283,25,0	1/1:1,21:22:50.76:604,51,0	1/1:0,18:18:38.99:475,39,0	1/1:0,14:14:32.32:341,32,0	1/1:0,9:9:14.08:161,14,0	1/1:0,6:6:14.59:146,15,0	1/1:1,3:3:2.95:37,3,0	1/1:1,13:14:24.29:281,24,0	1/1:0,5:5:6.01:64,6,0	1/1:1,19:20:35.18:531,35,0	1/1:0,21:21:47.74:592,48,0	1/1:1,3:4:1.82:5,2,0	1/1:2,19:21:43.18:516,43,0	1/1:0,23:23:61.88:673,62,0	1/1:0,25:25:60.10:647,60,0	1/1:3,8:11:17.29:107,17,0
chr10	20076168	.	CT	C	7599.89	PASS	AB=0.952;AC=53;AF=0.946;AN=56;BaseQRankSum=2.867;DP=426;FS=4.639;HRun=2;HaplotypeScore=636.3679;InbreedingCoeff=0.4805;MQ=60.36;MQ0=1;MQRankSum=-5.663;QD=18.54;ReadPosRankSum=2.395;VQSLOD=0.6829;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,9:9:10.80:133,11,0	1/1:0,7:7:16.43:113,16,0	0/0:15,0:11:14.50:0,14,102	0/1:19,1:13:13.85:14,0,22	1/1:1,33:34:61.80:563,62,0	1/1:0,11:11:26.53:258,27,0	1/1:0,14:14:37.09:330,37,0	1/1:0,22:22:51.82:519,52,0	1/1:0,11:11:23.22:170,23,0	1/1:0,17:17:40.32:295,40,0	1/1:0,25:25:55:500,55,0	1/1:0,17:17:36.87:315,37,0	1/1:0,13:13:20.87:204,21,0	1/1:1,21:22:47.36:387,47,0	1/1:0,17:17:40.83:372,41,0	1/1:0,9:9:21.77:167,22,0	1/1:0,8:8:13.08:109,13,0	1/1:0,5:5:11.86:105,12,0	1/1:0,4:3:5.95:63,6,0	1/1:0,17:17:33.95:359,34,0	1/1:0,3:3:5.85:49,6,0	1/1:1,21:22:56.30:510,56,0	1/1:0,19:19:50.62:448,51,0	1/1:0,6:6:4.83:38,5,0	1/1:0,19:19:43.93:386,44,0	1/1:0,25:25:62.90:499,63,0	1/1:0,22:22:57.05:494,57,0	1/1:0,12:12:22.59:200,23,0
chr10	20076176	.	AG	A	10198.05	PASS	AB=0.761;AC=52;AF=0.929;AN=56;BaseQRankSum=5.543;DP=476;FS=12.225;HRun=3;HaplotypeScore=655.0830;InbreedingCoeff=0.4189;MQ=69.46;MQ0=1;MQRankSum=-6.157;QD=22.66;ReadPosRankSum=2.938;VQSLOD=0.1501;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:3,7:10:4.81:161,0,5	1/1:1,6:7:18.99:161,19,0	0/0:26,0:21:27.21:0,27,330	0/1:25,1:17:18.77:19,0,258	1/1:1,35:36:75.94:836,76,0	1/1:0,12:12:29.58:347,30,0	1/1:2,12:14:36.11:436,36,0	1/1:4,22:26:65.95:782,66,0	1/1:1,11:12:27.81:265,28,0	1/1:1,18:19:48.24:456,48,0	1/1:3,24:27:58.34:622,58,0	1/1:3,14:17:34.28:347,34,0	1/1:0,13:13:24.85:274,25,0	1/1:3,19:22:41.46:446,41,0	1/1:2,17:19:41.82:454,42,0	1/1:0,8:8:19.58:176,20,0	1/1:0,8:8:10.83:116,11,0	1/1:1,4:5:11.40:119,11,0	1/1:1,7:7:11.98:145,12,0	1/1:1,18:19:47.43:508,47,0	1/1:0,3:3:8.97:80,9,0	1/1:5,18:23:49.81:538,50,0	1/1:1,18:19:47.70:546,48,0	1/1:0,7:7:4.83:42,5,0	1/1:1,20:21:48.89:530,49,0	1/1:1,26:27:70.04:749,70,0	1/1:1,25:26:71.21:724,71,0	1/1:0,14:14:34.06:320,34,0
chr10	20076184	.	AT	A	6860.54	PASS	AB=0.946;AC=53;AF=0.946;AN=56;BaseQRankSum=6.939;DP=494;FS=19.721;HRun=2;HaplotypeScore=631.2904;InbreedingCoeff=0.5817;MQ=81.24;MQ0=2;MQRankSum=-7.305;QD=15.25;ReadPosRankSum=2.766;VQSLOD=0.8858;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,10:10:19.73:130,20,0	1/1:3,5:8:20.73:126,21,0	0/0:41,1:33:47.73:0,48,466	0/1:33,0:22:10.22:10,0,302	1/1:6,29:35:75.18:495,75,0	1/1:0,12:12:29.40:231,29,0	1/1:2,10:12:35.78:271,36,0	1/1:5,21:26:71.81:583,72,0	1/1:3,8:11:22.04:140,22,0	1/1:6,13:19:40.59:311,41,0	1/1:2,23:25:58.13:429,58,0	1/1:4,12:16:33.30:235,33,0	1/1:0,13:13:23.74:188,24,0	1/1:2,17:19:40.04:290,40,0	1/1:0,19:19:45.43:344,45,0	1/1:3,5:8:18.95:124,19,0	1/1:1,7:8:12.12:83,12,0	1/1:0,4:4:8.99:77,9,0	1/1:0,9:9:14.92:125,15,0	1/1:1,20:21:52.91:385,53,0	1/1:1,4:5:10.61:61,11,0	1/1:3,19:22:56.75:392,57,0	1/1:1,17:18:44.75:341,45,0	1/1:1,7:8:7.18:37,7,0	1/1:3,17:20:42.81:308,43,0	1/1:4,23:27:65.05:468,65,0	1/1:3,20:23:58.23:424,58,0	1/1:0,17:17:35.81:253,36,0
chr10	20076191	.	AAG	A	9649.13	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=8.564;DP=487;FS=12.980;HRun=0;HaplotypeScore=563.8845;InbreedingCoeff=0.9027;MQ=84.84;MQ0=2;MQRankSum=-8.010;QD=24.31;ReadPosRankSum=6.103;VQSLOD=2.0237;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,10:12:25.19:223,25,0	1/1:1,5:6:18:179,18,0	0/0:50,0:36:87.45:0,87,1128	0/0:39,0:26:27.30:0,27,719	1/1:1,29:30:75.31:708,75,0	1/1:0,12:12:30.04:302,30,0	1/1:0,10:10:30.07:316,30,0	1/1:8,21:29:80.95:784,81,0	1/1:0,8:8:11.42:146,11,0	1/1:1,13:14:39:384,39,0	1/1:2,23:25:18.02:558,18,0	1/1:1,12:13:32.11:333,32,0	1/1:1,13:14:23.68:246,24,0	1/1:2,17:19:41.07:415,41,0	1/1:3,19:22:56.25:514,56,0	1/1:0,5:5:12.03:125,12,0	1/1:0,7:7:14.98:152,15,0	1/1:1,4:5:13.56:127,14,0	1/1:0,9:9:15.01:161,15,0	1/1:2,20:22:60.54:624,61,0	1/1:1,4:5:11.98:117,12,0	1/1:3,19:22:65.08:644,65,0	1/1:2,16:19:48.43:480,48,0	1/1:1,7:8:11.86:104,12,0	1/1:0,17:17:44.18:418,44,0	1/1:2,23:25:69.43:625,69,0	1/1:2,20:22:62.98:565,63,0	1/1:0,17:17:42.56:397,43,0
chr10	20076197	.	GGTT	G	8514.06	PASS	AB=0.945;AC=45;AF=0.804;AN=56;BaseQRankSum=6.840;DP=495;FS=7.144;HRun=0;HaplotypeScore=578.6645;InbreedingCoeff=0.4831;MQ=84.20;MQ0=2;MQRankSum=-8.523;QD=21.72;ReadPosRankSum=6.257;VQSLOD=4.0233;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,8:12:24.03:254,24,0	1/1:0,6:6:18.06:310,18,0	0/0:50,0:35:76.39:0,76,910	0/0:44,0:28:33.09:0,33,417	1/1:13,17:30:60.51:802,61,0	1/1:12,0:12:26.44:129,26,0	1/1:10,0:10:2.85:120,3,0	1/1:13,16:29:80.88:1067,81,0	0/1:5,3:8:5.46:153,0,5	1/1:15,0:15:15.03:152,15,0	1/1:25,0:25:32.87:337,33,0	1/1:13,0:13:21.26:149,21,0	1/1:14,0:14:12.65:144,13,0	0/1:19,0:19:1.34:136,0,1	1/1:8,14:22:58.17:766,58,0	1/1:5,0:5:9.41:44,9,0	1/1:7,0:7:5.18:60,5,0	0/1:5,0:5:2.21:42,0,2	0/0:9,0:9:11.13:0,11,62	1/1:24,0:24:13.30:270,13,0	0/1:6,0:6:1.62:41,0,2	1/1:22,0:22:36.78:315,37,0	0/1:19,0:19:4.88:196,0,5	1/1:8,0:8:11.65:75,12,0	1/1:4,13:17:30.02:582,30,0	1/1:7,18:25:72.90:952,73,0	1/1:3,18:22:60.35:846,60,0	1/1:3,14:17:41.55:572,42,0
chr10	20076220	.	TGG	T	15963.47	PASS	AB=0.778;AC=54;AF=0.964;AN=56;BaseQRankSum=0.955;DP=448;FS=6.219;HRun=3;HaplotypeScore=393.4345;InbreedingCoeff=-0.0463;MQ=72.73;MQ0=0;MQRankSum=-2.205;QD=35.63;ReadPosRankSum=2.866;VQSLOD=2.4644;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,7:11:18.06:272,18,0	1/1:0,13:13:39.13:595,39,0	0/1:16,7:16:93.11:283,0,93	0/1:18,6:20:84.52:258,0,85	1/1:3,22:25:48.24:704,48,0	1/1:0,9:9:27.09:400,27,0	1/1:1,11:12:36.12:547,36,0	1/1:2,27:29:75.25:1127,75,0	1/1:0,6:6:18.06:250,18,0	1/1:0,16:16:42.14:618,42,0	1/1:1,25:26:75.25:1091,75,0	1/1:0,10:10:30.10:444,30,0	1/1:1,10:11:30.10:423,30,0	1/1:1,13:14:36.12:528,36,0	1/1:4,18:22:60.20:899,60,0	1/1:0,1:1:3.01:46,3,0	1/1:1,6:7:15.05:228,15,0	1/1:1,6:7:17.42:237,17,0	1/1:0,4:4:12.04:175,12,0	1/1:0,23:23:66.22:1006,66,0	1/1:0,11:11:27.09:387,27,0	1/1:0,22:22:66.22:994,66,0	1/1:0,16:16:48.16:718,48,0	1/1:2,10:12:27.09:404,27,0	1/1:4,14:18:42.14:624,42,0	1/1:2,28:30:80.49:1141,80,0	1/1:3,23:26:62.26:938,62,0	1/1:1,17:18:42.14:629,42,0
chr10	20077369	.	TA	T	13271.23	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=12.497;DP=635;FS=14.458;HRun=2;HaplotypeScore=61.8303;InbreedingCoeff=0.9749;MQ=80.36;MQ0=0;MQRankSum=-1.202;QD=34.47;ReadPosRankSum=3.533;VQSLOD=3.8105;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,150,2164	0/0:10,0:10:30.10:0,30,450	0/0:19,0:19:54.18:0,54,775	0/0:15,0:15:36.01:0,36,465	0/0:18,0:18:54.18:0,54,809	1/1:0,11:11:30.10:389,30,0	1/1:0,37:37:96.31:1246,96,0	0/0:28,0:28:84.27:0,84,1215	0/0:28,0:28:84.28:0,84,1259	1/1:0,24:24:72.21:918,72,0	1/1:1,15:16:42.14:544,42,0	1/1:0,27:27:81.26:1052,81,0	1/1:0,24:24:66.21:857,66,0	1/1:0,27:27:66.21:855,66,0	0/0:21,0:21:63.21:0,63,944	1/1:0,26:26:66.06:857,66,0	1/1:0,27:27:72.23:933,72,0	1/1:0,32:32:90.27:1151,90,0	1/1:3,23:26:69.20:868,69,0	1/1:1,12:13:36.12:467,36,0	1/1:1,39:40:99:1285,99,0	1/1:1,20:21:57.14:720,57,0	1/1:1,12:13:36.12:467,36,0	1/1:0,21:21:51.17:662,51,0	0/0:25,0:25:75.24:0,75,1086	0/0:13,1:14:3.19:0,3,546	0/0:14,0:14:39.13:0,39,584	0/0:6,0:6:18.06:0,18,270
chr10	20078031	.	TATGGATCTTA	T	10265.22	PASS	AB=0.617;AC=13;AF=0.241;AN=54;BaseQRankSum=15.378;DP=652;FS=1.738;HRun=0;HaplotypeScore=197.6609;InbreedingCoeff=0.8612;MQ=76.18;MQ0=0;MQRankSum=-15.377;QD=61.84;ReadPosRankSum=4.001;VQSLOD=4.7549;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,27:35:72.25:2218,72,0	1/1:3,2:5:3.01:93,3,0	0/0:24,0:23:54.08:0,54,2064	0/0:21,0:21:39.13:0,39,1763	1/1:5,10:15:21.07:649,21,0	0/0:27,0:27:75.26:0,75,3774	0/0:28,0:28:75.26:0,75,3604	0/0:40,0:40:78.25:0,78,3541	1/1:4,20:24:51.18:1587,51,0	0/0:25,0:25:69.24:0,69,3325	0/0:13,0:13:24.08:0,24,1227	0/0:20,0:20:57.20:0,57,2519	0/0:22,0:22:60.21:0,60,2860	0/0:22,0:22:60.21:0,60,2935	0/0:23,0:23:51.18:0,51,2586	0/0:22,0:22:63.20:0,63,2885	0/0:37,0:37:99:0,99,4780	0/0:23,0:23:57.20:0,57,2703	0/0:19,0:19:39.13:0,39,1641	0/0:21,0:21:57.20:0,57,2725	0/0:34,0:34:96.32:0,96,4362	0/0:15,0:15:36.12:0,36,1818	0/0:22,0:22:60.21:0,60,2770	0/0:26,0:26:66.20:0,66,3017	1/1:3,18:21:45.15:1390,45,0	0/1:14,23:37:99:2179,0,226	1/1:5,24:29:69.24:2148,69,0	./.
chr10	20078811	.	TACAC	T	3731.02	PASS	AB=1.000;AC=33;AF=0.635;AN=52;BaseQRankSum=-3.967;DP=529;FS=0.000;HRun=0;HaplotypeScore=96.5632;InbreedingCoeff=0.7792;MQ=69.04;MQ0=13;MQRankSum=0.235;QD=12.78;ReadPosRankSum=2.981;VQSLOD=3.1145;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:36:24.09:0,24,360	0/0:6,0:12:6.20:0,6,107	./.	./.	0/1:10,0:16:0:0,0,0	1/1:8,12:21:14.14:282,14,0	1/1:20,1:22:30:332,30,0	0/0:18,0:16:9.02:0,9,133	0/0:9,0:15:23.81:0,24,369	1/1:10,10:20:32.26:404,32,0	1/1:6,2:8:6.02:93,6,0	1/1:9,6:17:20.62:285,21,0	1/1:6,6:13:14.09:215,14,0	1/1:2,9:11:5.98:67,6,0	0/0:15,0:20:41.57:0,42,741	1/1:9,16:26:17.33:262,17,0	1/1:12,11:24:33.58:499,34,0	1/1:8,8:17:8.58:270,9,0	1/1:5,2:6:3.01:47,3,0	1/1:10,4:15:11.50:190,11,0	1/1:10,5:15:3.01:47,3,0	1/1:6,5:11:5.92:94,6,0	1/1:11,9:20:23.70:310,24,0	1/1:13,10:25:5.10:334,5,0	0/0:8,0:17:5.69:0,6,104	0/0:7,0:17:29.92:0,30,386	0/0:16,0:18:24.04:0,24,375	0/0:2,0:9:12.04:0,12,209
chr10	20080543	.	C	CATATAT	273.46	PASS	AB=1.000;AC=5;AF=0.83;AN=6;DP=152;FS=0.000;HRun=0;HaplotypeScore=29.6360;MQ=76.82;MQ0=2;QD=9.77;VQSLOD=0.6353;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	./.	./.	./.	./.	./.	1/1:8,0:8:0.85:2,1,0	./.	./.	0/1:6,0:6:0:0,0,0	./.	./.	./.	./.	1/1:5,5:13:15.05:334,15,0	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.
chr10	20084750	.	GTGTATGTA	G	7316.08	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=11.885;DP=461;FS=11.970;HRun=0;HaplotypeScore=121.5765;InbreedingCoeff=0.9047;MQ=53.11;MQ0=6;MQRankSum=-10.325;QD=32.37;ReadPosRankSum=4.478;VQSLOD=3.9794;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:37.01:0,37,1356	0/0:3,0:3:6.02:0,6,174	0/0:22,0:17:30.09:0,30,661	0/0:25,0:15:27.03:0,27,705	0/0:31,0:31:81.26:0,81,3117	1/1:4,12:16:24.08:623,24,0	1/1:8,7:15:6.02:156,6,0	0/0:35,0:34:78.23:0,78,2125	0/0:12,0:12:30.10:0,30,1227	1/1:6,6:12:16.78:375,17,0	1/1:4,19:23:17.46:466,17,0	1/1:3,8:11:12.04:311,12,0	1/1:0,7:7:18.06:467,18,0	1/1:4,11:15:18.06:467,18,0	0/0:12,0:12:21.07:0,21,821	1/1:0,10:10:24.08:623,24,0	1/1:7,5:12:12.04:312,12,0	1/1:6,9:15:6.02:156,6,0	1/1:6,14:19:42.14:1069,42,0	1/1:12,14:26:54.15:1265,54,0	1/1:7,3:10:9.50:168,10,0	1/1:3,10:12:12.04:312,12,0	1/1:3,12:15:17.96:467,18,0	1/1:3,3:6:3.01:78,3,0	0/0:18,0:18:42.14:0,42,1633	0/0:19,0:19:45.15:0,45,1741	0/0:19,0:19:33.11:0,33,1277	0/0:9,0:9:27.09:0,27,1133
chr10	20084834	.	TTG	T	2320.73	PASS	AB=0.885;AC=43;AF=0.827;AN=52;BaseQRankSum=2.551;DP=300;FS=4.704;HRun=0;HaplotypeScore=56.9782;InbreedingCoeff=0.5232;MQ=52.92;MQ0=4;MQRankSum=2.860;QD=9.96;ReadPosRankSum=5.130;VQSLOD=2.5474;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:15:8.99:43,9,0	1/1:1,0:3:5.68:28,6,0	./.	0/0:10,0:4:2.99:0,3,23	1/1:3,0:9:14.16:69,14,0	1/1:10,7:18:26.90:277,27,0	1/1:3,3:6:3.01:33,3,0	0/0:30,0:30:42.09:0,42,506	1/1:4,0:6:8.18:37,8,0	1/1:5,5:10:12.03:133,12,0	1/1:8,4:12:15.04:167,15,0	1/1:3,0:4:8.86:79,9,0	./.	1/1:2,2:4:3.01:33,3,0	0/0:1,0:6:9:0,9,79	1/1:2,3:5:9.02:100,9,0	1/1:7,14:20:16.14:347,16,0	1/1:13,3:15:21.06:233,21,0	0/1:20,3:23:28.11:148,0,28	1/1:6,9:15:27.07:301,27,0	1/1:13,6:20:8.86:81,9,0	0/0:2,0:7:12:0,12,108	1/1:1,4:5:6.02:67,6,0	1/1:3,5:8:14.83:167,15,0	1/1:2,0:6:11.36:56,11,0	1/1:9,0:10:2.84:14,3,0	1/1:9,0:14:8.52:42,9,0	1/1:1,0:2:2.84:14,3,0
chr10	20086492	.	A	ACT	859.05	PASS	AB=0.820;AC=8;AF=0.143;AN=56;BaseQRankSum=10.447;DP=736;FS=51.631;HRun=0;HaplotypeScore=292.5642;InbreedingCoeff=-0.1752;MQ=49.88;MQ0=15;MQRankSum=-6.454;QD=4.47;ReadPosRankSum=-4.243;VQSLOD=1.1045;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:25:5.83:0,6,92	0/1:11,4:15:99:135,0,118	0/0:56,0:31:75:0,75,1125	0/0:80,0:46:84.14:0,84,1418	0/1:20,2:22:53.64:54,0,208	0/0:25,0:25:57.18:0,57,851	0/0:23,0:23:27.06:0,27,432	0/0:31,0:30:82.95:0,83,1050	0/0:16,0:16:17.90:0,18,240	0/1:25,3:25:36.07:36,0,760	0/1:17,5:22:80.46:80,0,270	0/0:22,0:22:36.08:0,36,523	0/0:22,0:22:42.14:0,42,638	0/0:24,0:24:39.13:0,39,587	0/0:18,0:18:39.12:0,39,574	0/0:15,0:15:24.08:0,24,367	0/0:22,0:22:44.59:0,45,584	0/0:17,0:17:50.91:0,51,743	0/0:27,0:26:69.15:0,69,961	0/1:17,12:28:99:267,0,592	0/0:48,0:46:74.47:0,74,1102	0/1:26,3:29:42.66:43,0,480	0/1:16,6:22:99:115,0,201	0/0:28,0:28:10.26:0,10,182	0/1:16,9:25:99:265,0,159	0/0:24,0:24:69.13:0,69,981	0/0:15,0:14:30:0,30,409	0/0:5,0:5:15.05:0,15,229
chr10	20086498	.	T	TCA	582.84	PASS	AB=0.841;AC=8;AF=0.143;AN=56;BaseQRankSum=9.999;DP=710;FS=44.245;HRun=0;HaplotypeScore=283.4300;InbreedingCoeff=-0.1747;MQ=47.99;MQ0=22;MQRankSum=-6.563;QD=3.13;ReadPosRankSum=-1.447;VQSLOD=1.2262;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:24:6.49:0,6,81	0/1:11,3:14:91.35:145,0,91	0/0:54,0:27:54.17:0,54,706	0/0:74,0:39:48.30:0,48,797	0/1:20,2:22:34.87:35,0,126	0/0:25,0:24:51.13:0,51,652	0/0:23,0:23:27.77:0,28,367	0/0:33,0:31:45.22:0,45,557	0/0:16,0:16:12.04:0,12,154	0/1:23,3:23:19.85:20,0,585	0/1:16,4:20:56.41:56,0,173	0/0:19,0:19:27.07:0,27,338	0/0:21,0:21:45.54:0,46,551	0/0:24,0:24:36.12:0,36,471	0/0:17,0:17:36.12:0,36,473	0/0:15,0:15:24.08:0,24,315	0/0:22,0:22:29.95:0,30,353	0/0:18,0:18:46.91:0,47,539	0/0:24,0:23:33.04:0,33,397	0/1:20,8:27:99:179,0,340	0/0:45,0:42:53.86:0,54,696	0/1:26,3:29:22.49:22,0,249	0/1:18,5:23:62.71:63,0,152	0/0:26,0:26:11.99:0,12,158	0/1:16,8:24:88.91:197,0,89	0/0:25,0:25:45.61:0,46,598	0/0:13,0:12:24.45:0,24,277	0/0:5,0:5:15.05:0,15,197
chr10	20086545	.	CAG	C	1883.50	PASS	AB=0.983;AC=45;AF=0.833;AN=54;BaseQRankSum=3.037;DP=400;FS=2.270;HRun=0;HaplotypeScore=226.0524;InbreedingCoeff=0.3109;MQ=39.59;MQ0=13;MQRankSum=-4.375;QD=4.90;ReadPosRankSum=1.057;VQSLOD=3.0414;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:21,0:19:0.01:1,0,0	0/1:9,0:9:2.88:12,0,3	0/0:10,0:4:4.87:0,5,43	0/0:6,0:1:2.04:0,2,6	1/1:9,0:9:0.81:3,1,0	1/1:17,0:16:5.06:42,5,0	1/1:22,0:22:8.19:83,8,0	1/1:27,0:24:26.35:292,26,0	1/1:5,6:12:11.85:87,12,0	1/1:10,0:10:22.86:141,23,0	0/1:14,0:14:10.82:16,0,11	1/1:12,0:12:11.72:74,12,0	1/1:20,0:19:35.07:213,35,0	1/1:17,0:17:11.20:64,11,0	0/1:20,2:22:51.89:52,0,66	1/1:14,0:14:11.79:74,12,0	1/1:16,0:15:20.62:137,21,0	1/1:13,0:13:16.22:125,16,0	1/1:13,0:13:29.63:200,30,0	1/1:9,0:8:2.60:6,3,0	1/1:24,0:22:10.64:93,11,0	1/1:14,0:14:7.41:46,7,0	1/1:7,0:7:0.06:0,0,0	0/1:14,0:13:0.17:0,0,0	1/1:16,0:16:8.76:55,9,0	1/1:20,0:20:14.85:135,15,0	1/1:12,0:11:2.78:45,3,0	./.
chr10	20086546	.	AG	A	434.18	PASS	AB=0.830;AC=21;AF=0.389;AN=54;BaseQRankSum=1.324;DP=357;FS=4.323;HRun=1;HaplotypeScore=204.7191;InbreedingCoeff=-0.0540;MQ=44.71;MQ0=10;MQRankSum=-0.166;QD=1.79;ReadPosRankSum=1.372;VQSLOD=-0.7600;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:17,0:15:0.01:1,0,0	0/0:8,0:8:2.97:0,3,20	0/0:11,0:5:10.79:0,11,121	0/0:5,0:2:3.01:0,3,32	0/0:5,0:5:5.85:0,6,48	1/1:12,4:16:14.03:124,14,0	0/1:14,6:21:9.85:10,0,23	0/0:25,0:22:61.92:0,62,409	0/1:12,0:12:7.09:7,0,8	0/1:6,4:10:18.78:53,0,19	0/1:10,3:13:15.06:34,0,15	0/1:7,5:12:2.05:62,0,2	0/1:10,8:18:32.55:77,0,33	0/1:12,4:16:8.11:72,0,8	0/0:19,0:19:5.41:0,5,86	0/1:12,2:14:8.09:8,0,31	0/1:9,3:11:5.80:6,0,45	0/1:9,3:12:29.99:30,0,30	0/1:9,3:12:28.09:28,0,46	0/1:6,1:7:0:0,0,0	0/1:17,4:20:18.17:18,0,36	1/1:5,4:9:6.03:28,6,0	0/1:4,0:4:0.01:0,0,0	1/1:11,3:13:2.97:20,3,0	0/0:13,0:13:4.72:0,5,25	0/0:17,0:17:47.64:0,48,373	0/0:12,0:11:28.99:0,29,235	./.
chr10	20086548	.	ACAG	A	1925.57	PASS	AB=0.825;AC=36;AF=0.667;AN=54;BaseQRankSum=3.636;DP=357;FS=11.091;HRun=0;HaplotypeScore=213.3216;InbreedingCoeff=0.5087;MQ=43.77;MQ0=10;MQRankSum=-3.478;QD=7.11;ReadPosRankSum=-4.098;VQSLOD=1.2541;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:21:0.94:2,1,0	0/0:9,0:9:0.83:0,1,2	0/0:11,0:5:5.24:0,5,107	0/0:5,0:2:3.48:0,3,33	0/0:5,0:5:5.89:0,6,61	1/1:13,4:16:41.19:296,41,0	1/1:16,6:22:20.08:147,20,0	0/0:25,0:22:53.48:0,53,300	1/1:11,0:11:0.51:45,1,0	0/1:8,4:12:4.64:125,0,5	0/1:6,3:9:23.12:78,0,23	1/1:5,5:10:18.65:158,19,0	1/1:10,8:17:23.07:261,23,0	1/1:11,4:15:23.02:153,23,0	0/1:18,0:18:0.25:0,0,197	1/1:10,2:12:10.02:107,10,0	1/1:10,3:12:4.18:57,4,0	1/1:9,3:12:13.14:121,13,0	0/1:9,3:12:9.62:100,0,10	1/1:6,1:7:11.70:72,12,0	1/1:16,3:19:18.74:109,19,0	1/1:5,4:9:18.72:135,19,0	1/1:4,0:4:8.57:59,9,0	1/1:14,3:16:10.87:65,11,0	1/1:11,0:11:1.83:3,2,0	0/0:19,0:19:44.33:0,44,287	0/0:12,0:11:27.72:0,28,192	./.
chr10	20088341	.	A	AGAAT	8314.80	PASS	AB=0.653;AC=15;AF=0.268;AN=56;BaseQRankSum=-13.622;DP=736;FS=2.324;HRun=0;HaplotypeScore=110.5612;InbreedingCoeff=0.8989;MQ=76.29;MQ0=2;MQRankSum=0.542;QD=38.85;ReadPosRankSum=2.290;VQSLOD=4.8707;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,25:37:60.21:1438,60,0	1/1:4,6:10:18.06:431,18,0	0/0:30,0:25:18.06:0,18,285	0/0:28,0:27:24.08:0,24,339	1/1:10,20:33:57.20:1360,57,0	0/0:21,0:21:45.14:0,45,687	0/0:27,0:27:48.15:0,48,743	0/0:33,0:33:39.13:0,39,603	1/1:8,15:23:45.15:1075,45,0	0/0:22,0:22:45.15:0,45,718	0/0:16,0:16:36.12:0,36,575	0/0:29,0:29:42.13:0,42,643	0/0:28,0:28:57.17:0,57,866	0/0:34,0:34:54.18:0,54,862	0/0:27,0:27:45.15:0,45,710	0/0:28,0:28:63.21:0,63,1002	0/0:8,0:8:12:0,12,163	0/0:26,0:26:39.10:0,39,577	0/0:28,0:29:37.36:0,37,585	0/0:16,0:16:27.09:0,27,431	0/0:30,0:30:48.15:0,48,743	0/0:36,0:36:72.14:0,72,1087	0/0:29,0:29:63.18:0,63,936	0/0:24,0:24:45.15:0,45,718	1/1:9,17:26:42.14:1007,42,0	0/1:15,17:32:37.61:1143,0,38	1/1:13,23:37:60.13:1429,60,0	1/1:7,9:16:18.06:432,18,0
chr10	20089503	.	CTGTGTG	C	1703.03	PASS	AB=0.853;AC=30;AF=0.600;AN=50;BaseQRankSum=5.354;DP=599;FS=0.000;HRun=0;HaplotypeScore=124.4191;InbreedingCoeff=0.5947;MQ=62.46;MQ0=10;MQRankSum=-4.846;QD=4.80;ReadPosRankSum=1.379;VQSLOD=2.0238;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:35:39.12:0,39,834	0/0:6,0:6:9.03:0,9,204	./.	./.	0/0:12,0:12:9.03:0,9,269	1/1:12,8:20:15.05:297,15,0	1/1:17,5:22:9.50:163,9,0	./.	0/1:28,1:30:15.18:15,0,922	1/1:25,7:31:11.86:136,12,0	1/1:8,0:9:3.01:42,3,0	0/1:14,4:20:28.91:89,0,29	1/1:21,2:25:12.02:187,12,0	1/1:12,3:16:9.03:162,9,0	0/0:24,0:24:21.54:0,22,576	1/1:19,2:21:12.04:208,12,0	1/1:20,8:28:6.02:119,6,0	0/0:23,3:26:3.01:0,3,69	1/1:24,0:26:6:64,6,0	1/1:14,5:19:3.01:60,3,0	1/1:31,0:31:9:93,9,0	1/1:11,5:16:6.02:102,6,0	1/1:8,0:7:3:25,3,0	1/1:26,2:29:5.95:121,6,0	0/0:15,0:19:12.04:0,12,240	0/0:27,0:27:23.11:0,23,495	0/0:13,0:11:18.06:0,18,414	0/0:12,0:12:15.05:0,15,394
chr10	20090710	.	TCATGACGGCCA	T	21761.33	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=16.220;DP=563;FS=0.700;HRun=0;HaplotypeScore=198.1846;InbreedingCoeff=0.9906;MQ=68.84;MQ0=0;MQRankSum=-18.020;QD=71.35;ReadPosRankSum=1.492;VQSLOD=4.8299;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,132,7168	0/0:10,0:10:27.09:0,27,1423	0/0:14,0:14:39.13:0,39,1741	0/0:10,0:10:27.09:0,27,1200	0/0:19,0:19:51.18:0,51,2742	1/1:3,16:19:36.12:1241,36,0	1/1:3,11:14:27.09:931,27,0	0/0:27,0:27:75.21:0,75,3433	0/0:23,0:23:60.21:0,60,3309	1/1:3,23:26:69.24:2329,69,0	1/1:2,10:12:30.10:1001,30,0	1/1:4,16:20:45.15:1549,45,0	1/1:4,13:17:33.11:1138,33,0	1/1:3,21:24:60.21:2069,60,0	0/0:35,0:35:99:0,102,5568	1/1:1,23:24:66.23:2275,66,0	1/1:5,13:18:24.08:730,24,0	1/1:2,9:11:30.10:949,30,0	1/1:5,11:16:33.11:1074,33,0	1/1:2,16:18:45.15:1551,45,0	1/1:7,24:31:42.14:1440,42,0	1/1:1,14:15:42.14:1440,42,0	1/1:4,9:13:23.73:822,24,0	1/1:6,21:27:36.68:1220,37,0	0/0:14,0:14:36.12:0,36,2026	0/0:17,0:17:51.18:0,51,2753	0/0:36,0:35:99:0,108,6055	0/0:5,0:5:9.03:0,9,509
chr10	20090917	.	CA	C	5004.97	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-12.805;DP=717;FS=2.646;HRun=9;HaplotypeScore=106.5112;InbreedingCoeff=0.9997;MQ=64.91;MQ0=1;MQRankSum=2.713;QD=23.83;ReadPosRankSum=4.483;VQSLOD=4.6604;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,31:33:88.53:820,89,0	1/1:0,14:14:36.02:330,36,0	0/0:19,1:18:41.48:0,41,423	0/0:17,0:15:30.08:0,30,336	1/1:2,26:28:37.41:595,37,0	0/0:31,0:31:76.47:0,76,509	0/0:15,0:15:38.42:0,38,248	0/0:32,0:32:56.85:0,57,903	1/1:2,23:25:66.03:604,66,0	0/0:28,0:28:69.60:0,70,406	0/0:21,0:21:61.92:0,62,430	0/0:29,0:29:73.81:0,74,489	0/0:28,0:28:79.74:0,80,553	0/0:12,0:12:29.43:0,29,206	0/0:35,2:38:53.21:0,53,1088	0/0:27,0:27:73.62:0,74,497	0/0:31,0:31:76.84:0,77,509	0/0:23,0:23:33.43:0,33,346	0/0:20,0:20:36.82:0,37,242	0/0:27,0:27:76.45:0,76,499	0/0:33,0:33:93.12:0,93,569	0/0:17,0:17:50.36:0,50,331	0/0:29,0:29:70.79:0,71,478	0/0:28,0:29:67.08:0,67,459	1/1:1,22:23:60.03:549,60,0	1/1:4,23:27:72.02:654,72,0	1/1:2,38:40:99:1016,111,0	1/1:2,17:19:47.62:438,48,0
chr10	20091282	.	C	CTG	18723.10	PASS	AB=0.941;AC=33;AF=0.589;AN=56;BaseQRankSum=11.536;DP=651;FS=10.257;HRun=0;HaplotypeScore=100.3363;InbreedingCoeff=0.9350;MQ=78.21;MQ0=0;MQRankSum=-3.099;QD=46.81;ReadPosRankSum=4.283;VQSLOD=5.7440;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,114,1677	0/0:11,0:11:33.11:0,33,484	0/0:13,0:13:30.08:0,30,409	0/0:17,0:18:44.81:0,45,605	0/0:30,0:30:81.23:0,81,1167	1/1:0,21:21:54.19:1011,54,0	1/1:2,29:31:87.30:1628,87,0	0/0:32,0:32:87.28:0,87,1246	0/0:24,0:24:72.23:0,72,1039	1/1:3,19:23:66.19:1122,66,0	1/1:0,12:12:36.12:674,36,0	1/1:2,31:33:87.18:1591,87,0	1/1:0,20:20:51.17:955,51,0	1/1:1,23:24:69.24:1292,69,0	0/0:29,0:29:81.27:0,81,1193	1/1:2,17:18:51.17:955,51,0	1/1:1,33:35:96.33:1797,96,0	1/1:1,13:14:36.12:674,36,0	1/1:4,13:17:45.15:841,45,0	1/1:2,21:23:57.20:1067,57,0	1/1:2,39:42:99:1854,99,0	1/1:2,8:10:18.06:337,18,0	1/1:1,20:22:57.20:1065,57,0	1/1:2,35:38:99:1853,99,0	0/0:11,0:11:33.11:0,33,486	0/1:15,1:16:8.06:8,0,614	0/0:25,0:24:75.25:0,75,1098	0/0:17,0:17:48.16:0,48,703
chr10	20092743	.	GTTAGCCATA	G	17234.56	PASS	AC=30;AF=0.556;AN=54;BaseQRankSum=16.962;DP=693;FS=7.447;HRun=0;HaplotypeScore=225.4008;InbreedingCoeff=0.9887;MQ=88.31;MQ0=0;MQRankSum=-17.486;QD=49.81;ReadPosRankSum=3.585;VQSLOD=3.2123;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,151,6900	0/0:9,0:9:27.09:0,27,1198	0/0:27,0:27:78.22:0,78,3008	0/0:35,0:35:99:0,102,3705	0/0:27,0:27:71.76:0,72,3241	1/1:0,16:16:36.12:1115,36,0	1/1:1,18:19:26.68:835,27,0	0/0:34,0:34:96.31:0,96,3961	0/0:33,0:33:99:0,99,4749	1/1:0,20:20:48.14:1275,48,0	1/1:1,14:15:21.07:617,21,0	1/1:1,29:30:66.23:2012,66,0	1/1:2,27:29:60.21:1857,60,0	1/1:2,18:20:42.14:1245,42,0	0/0:38,0:38:99:0,114,5251	1/1:0,40:40:99:2951,99,0	1/1:5,12:17:17.77:498,18,0	1/1:1,18:19:27.05:764,27,0	1/1:0,20:20:59.99:1066,60,0	1/1:2,35:37:42.03:1050,42,0	./.	1/1:1,19:21:36.12:1076,36,0	1/1:1,17:18:15.05:411,15,0	1/1:3,22:25:14.44:463,14,0	0/0:15,0:15:45.15:0,45,2108	0/0:35,1:36:12.35:0,12,4327	0/0:20,0:19:57.20:0,57,2686	0/0:11,0:11:33.11:0,33,1592
chr10	20093024	.	TTAG	T	1128.45	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-2.401;DP=748;FS=14.339;HRun=0;HaplotypeScore=155.3869;InbreedingCoeff=0.9415;MQ=78.92;MQ0=0;MQRankSum=-4.627;QD=45.14;ReadPosRankSum=-3.598;VQSLOD=3.5459;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,111,2512	0/0:3,0:3:9.03:0,9,204	0/0:16,0:16:45.07:0,45,841	0/0:20,0:20:39.92:0,40,998	0/0:15,0:15:42.14:0,42,968	0/0:23,0:23:69.24:0,69,1568	0/0:21,0:21:63.22:0,63,1427	1/1:1,24:25:72.25:1223,72,0	0/0:38,0:38:99:0,105,2266	0/0:26,0:26:72.25:0,72,1629	0/0:26,0:26:69.24:0,69,1554	0/0:36,0:36:99:0,102,2303	0/0:32,0:32:96.29:0,96,2098	0/0:34,0:34:96.28:0,96,2092	0/0:32,0:32:96.28:0,96,2030	0/0:41,0:41:99:0,114,2606	0/0:25,0:25:72.23:0,72,1612	0/0:22,0:22:66.23:0,66,1502	0/0:18,0:18:54.06:0,54,1011	0/0:15,0:15:42.13:0,42,923	0/0:39,0:39:99:0,111,2469	0/0:26,0:26:78.27:0,78,1790	0/0:24,0:24:69.24:0,69,1568	0/0:47,0:47:99:0,132,2994	0/0:23,0:23:63.22:0,63,1431	0/0:45,0:45:99:0,128,2927	0/0:31,0:31:93.32:0,93,2055	0/0:7,0:7:21:0,21,343
chr10	20094089	.	TA	T	761.85	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.885;DP=753;FS=1.704;HRun=2;HaplotypeScore=72.1421;InbreedingCoeff=0.9995;MQ=84.53;MQ0=0;MQRankSum=-0.931;QD=31.74;ReadPosRankSum=1.567;VQSLOD=3.5135;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:60,0:60:99:0,175,2540	0/0:10,0:10:30.09:0,30,430	0/0:18,0:18:54.16:0,54,753	0/0:29,0:29:72.01:0,72,1020	0/0:34,0:34:99:0,99,1443	0/0:29,0:29:78.24:0,78,1131	0/0:22,0:22:66.21:0,66,960	0/0:39,0:39:99:0,117,1684	1/1:0,24:24:66.21:857,66,0	0/0:22,0:22:63.20:0,63,888	0/0:27,0:27:81.27:0,81,1196	0/0:31,0:31:93.32:0,93,1394	0/0:38,0:38:99:0,114,1625	0/0:27,0:27:81.25:0,81,1170	0/0:40,0:40:99:0,117,1696	0/0:20,0:20:60.19:0,60,881	0/0:22,0:22:63.19:0,63,915	0/0:15,0:15:45.13:0,45,651	0/0:19,0:19:54.16:0,54,763	0/0:31,0:31:90.27:0,90,1286	0/0:37,0:37:99:0,111,1624	0/0:26,0:26:75.23:0,75,1084	0/0:19,0:19:57.18:0,57,834	0/0:24,0:24:69.22:0,69,1010	0/0:17,0:17:51.16:0,51,745	0/0:29,0:29:84.28:0,84,1259	0/0:27,0:25:78.26:0,78,1158	0/0:17,0:17:48.12:0,48,658
chr10	20097470	.	CTT	C	931.52	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.068;DP=781;FS=4.127;HRun=2;HaplotypeScore=91.9738;InbreedingCoeff=0.9996;MQ=89.12;MQ0=0;MQRankSum=0.107;QD=42.34;ReadPosRankSum=1.406;VQSLOD=3.7668;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,151,3048	0/0:13,0:13:39.13:0,39,783	0/0:29,0:29:83.37:0,83,1573	0/0:31,0:31:90.04:0,90,1656	0/0:27,0:27:81.28:0,81,1632	0/0:14,0:14:42.14:0,42,842	0/0:34,0:34:99:0,102,1983	0/0:37,0:37:99:0,108,2182	1/1:0,22:22:63.22:1026,63,0	0/0:27,0:27:81.28:0,81,1635	0/0:26,0:26:78.26:0,78,1543	0/0:30,0:30:90.31:0,90,1828	0/0:33,0:33:99:0,99,1989	0/0:39,0:39:99:0,117,2277	0/0:37,0:37:99:0,111,2219	0/0:33,0:33:99:0,99,1927	0/0:33,0:33:99:0,99,1988	0/0:29,0:29:84.27:0,84,1655	0/0:27,0:27:81.26:0,81,1601	0/0:21,0:21:63.21:0,63,1246	0/0:40,0:40:99:0,120,2426	0/0:18,0:18:54.19:0,54,1097	0/0:21,0:21:63.22:0,63,1280	0/0:35,0:34:99:0,105,2133	0/0:16,0:16:48.16:0,48,968	0/0:19,0:19:57.20:0,57,1159	0/0:29,0:29:87.28:0,87,1721	0/0:11,0:11:33.09:0,33,633
chr10	20097645	.	G	GA	9559.94	PASS	AB=0.750;AC=32;AF=0.571;AN=56;BaseQRankSum=12.540;DP=703;FS=4.100;HRun=9;HaplotypeScore=118.8913;InbreedingCoeff=0.8372;MQ=72.63;MQ0=1;MQRankSum=-5.590;QD=23.15;ReadPosRankSum=0.997;VQSLOD=4.1363;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:95.96:0,96,833	0/0:10,0:10:23.99:0,24,208	0/0:23,0:22:22.87:0,23,236	0/1:18,1:19:13.75:14,0,146	0/0:31,0:33:78.39:0,78,661	1/1:4,14:17:42.11:464,42,0	1/1:4,20:24:60.12:650,60,0	0/0:36,0:36:83.93:0,84,726	0/0:20,0:20:56.99:0,57,495	1/1:10,25:35:58.19:868,58,0	1/1:6,14:20:45.11:491,45,0	1/1:5,17:22:48.13:531,48,0	1/1:4,17:21:31.09:564,31,0	1/1:7,23:30:69.16:742,69,0	0/0:27,0:27:62.96:0,63,543	1/1:7,18:25:40.10:660,40,0	1/1:6,11:18:38.16:458,38,0	1/1:3,18:21:54.13:588,54,0	0/1:10,15:25:8.85:558,0,9	1/1:12,30:42:50.11:989,50,0	1/1:8,7:14:18.05:199,18,0	1/1:6,16:23:50.93:532,51,0	1/1:9,18:27:51.13:557,51,0	1/1:8,18:25:65.75:697,66,0	0/0:30,0:30:77.96:0,78,677	0/0:25,1:26:2.63:0,3,478	0/0:31,0:31:83.94:0,84,721	0/0:17,0:17:50.97:0,51,438
chr10	20097659	.	GAA	G	10792.59	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=15.958;DP=687;FS=4.455;HRun=10;HaplotypeScore=125.8228;InbreedingCoeff=0.9957;MQ=65.03;MQ0=1;MQRankSum=-8.263;QD=28.03;ReadPosRankSum=0.964;VQSLOD=4.2912;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:93.32:0,93,1468	0/0:11,0:11:33.08:0,33,497	0/0:17,0:16:32.12:0,32,404	0/0:14,0:12:12.34:0,12,141	0/0:36,0:36:99:0,99,1527	1/1:3,13:15:42.11:466,42,0	1/1:2,23:25:66.17:734,66,0	0/0:7,0:40:82.90:0,83,291	0/0:21,0:21:57.18:0,57,878	1/1:4,34:38:99:1119,102,0	1/1:3,17:20:50.78:567,51,0	1/1:2,17:19:54.14:602,54,0	1/1:4,18:22:54.59:593,55,0	1/1:2,28:30:81.67:890,82,0	0/0:25,0:26:71.71:0,72,1061	1/1:4,20:24:57.14:635,57,0	1/1:4,14:18:36.03:388,36,0	1/1:2,19:21:60.16:667,60,0	1/1:5,23:28:72.12:772,72,0	1/1:5,31:36:93.24:1034,93,0	1/1:0,13:12:27.06:300,27,0	1/1:2,19:21:51.13:566,51,0	1/1:4,26:30:69.18:768,69,0	1/1:3,21:24:63.14:692,63,0	0/0:27,0:27:66.21:0,66,1027	0/0:26,1:27:41.81:0,42,1110	0/0:27,0:27:81.25:0,81,1238	0/0:20,0:20:57.19:0,57,905
chr10	20098151	.	T	TACACAC	8800.79	PASS	AB=0.783;AC=38;AF=0.679;AN=56;BaseQRankSum=-0.774;DP=838;FS=1.941;HRun=0;HaplotypeScore=172.9110;InbreedingCoeff=0.7476;MQ=53.72;MQ0=12;MQRankSum=-7.586;QD=14.79;ReadPosRankSum=-2.703;VQSLOD=3.7986;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:49:79.91:0,80,1401	0/0:10,0:10:18.06:0,18,346	1/1:32,0:3:2.94:18,3,0	0/1:38,0:9:21.90:22,0,32	0/0:28,0:30:41.57:0,42,918	1/1:6,11:18:12.04:392,12,0	1/1:12,17:31:9.03:228,9,0	1/1:34,0:33:31.37:220,31,0	1/1:19,0:31:52.20:683,52,0	1/1:11,23:43:86.49:1271,86,0	1/1:6,9:16:6.02:197,6,0	1/1:12,20:32:21.07:687,21,0	1/1:4,20:26:36.12:1102,36,0	1/1:13,25:39:29.97:897,30,0	0/0:38,0:38:71.94:0,72,1338	1/1:15,21:42:14.30:429,14,0	1/1:17,9:29:12.04:333,12,0	0/1:3,9:13:27.93:187,0,28	1/1:13,8:22:32.63:524,33,0	1/1:5,19:26:21.07:627,21,0	1/1:22,2:46:14.96:181,15,0	1/1:6,15:24:12.04:392,12,0	1/1:2,13:20:12.04:273,12,0	1/1:9,19:31:5.73:137,6,0	0/0:21,0:22:35.89:0,36,648	0/0:32,0:32:47.06:0,47,843	0/0:35,0:44:88.08:0,88,1438	0/0:16,0:17:33.35:0,33,548
chr10	20098223	.	GA	G	1909.32	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.501;DP=759;FS=1.769;HRun=1;HaplotypeScore=90.4750;InbreedingCoeff=0.9918;MQ=81.18;MQ0=1;MQRankSum=-0.736;QD=36.02;ReadPosRankSum=-3.074;VQSLOD=2.7505;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:52:99:0,156,2417	0/0:18,0:18:54.17:0,54,840	0/0:26,0:26:73.04:0,73,1106	0/0:33,0:34:81.64:0,82,1278	0/0:18,0:18:51.12:0,51,764	0/0:17,0:17:45.15:0,45,719	0/0:26,0:26:61.54:0,62,1178	1/1:0,30:30:90.28:1237,90,0	1/1:2,21:23:15.24:791,15,0	0/0:30,0:30:90.30:0,90,1414	0/0:10,0:10:30.10:0,30,479	0/0:28,0:28:72.14:0,72,1137	0/0:28,0:28:75.25:0,75,1171	0/0:28,0:28:72.24:0,72,1136	0/0:37,0:37:99:0,108,1679	0/0:34,0:34:69.24:0,69,1103	0/0:30,0:30:81.28:0,81,1279	0/0:25,0:25:60.10:0,60,959	0/0:25,0:25:72.21:0,72,1124	0/0:20,0:20:60.20:0,60,959	0/0:51,0:49:99:0,132,2106	0/0:22,0:22:60.20:0,60,956	0/0:17,0:17:42.14:0,42,671	0/0:33,0:33:63.20:0,63,990	0/0:20,0:20:60.19:0,60,936	0/0:32,0:32:93.32:0,93,1485	0/0:26,0:26:78.25:0,78,1224	0/0:18,0:18:54.18:0,54,863
chr10	20098809	.	G	GT	22946.49	PASS	AB=0.800;AC=55;AF=0.982;AN=56;BaseQRankSum=0.105;DP=581;FS=0.000;HRun=2;HaplotypeScore=352.9646;InbreedingCoeff=-0.0190;MQ=46.10;MQ0=0;MQRankSum=-2.400;QD=39.49;ReadPosRankSum=1.238;VQSLOD=3.1996;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,21:21:54.18:805,54,0	1/1:2,12:14:36.12:533,36,0	1/1:5,2:7:17:139,17,0	0/1:3,1:4:19.11:34,0,19	1/1:2,27:29:51.17:797,51,0	1/1:0,20:20:60.20:919,60,0	1/1:1,28:29:78.26:1206,78,0	1/1:1,30:31:90.31:1436,90,0	1/1:4,21:25:72.25:1133,72,0	1/1:2,31:33:96.33:1528,96,0	1/1:2,8:10:18.06:246,18,0	1/1:2,26:27:78.26:1200,78,0	1/1:2,24:26:75.25:1177,75,0	1/1:3,27:30:87.29:1294,87,0	1/1:2,26:27:75.25:1153,75,0	1/1:1,19:20:60.20:940,60,0	1/1:1,21:22:57.66:881,58,0	1/1:3,14:16:39.13:610,39,0	1/1:3,14:17:45.15:709,45,0	1/1:0,16:16:36.12:572,36,0	1/1:4,22:26:43.08:624,43,0	1/1:2,11:14:33.09:472,33,0	1/1:1,11:12:30.10:446,30,0	1/1:2,17:19:33.11:524,33,0	1/1:1,21:22:63.20:966,63,0	1/1:4,24:28:78.27:1235,78,0	1/1:2,26:28:75.25:1177,75,0	1/1:0,4:4:12.04:191,12,0
chr10	20098829	.	T	TA	6931.38	PASS	AB=0.833;AC=55;AF=0.982;AN=56;BaseQRankSum=0.482;DP=550;FS=20.852;HRun=1;HaplotypeScore=377.0723;InbreedingCoeff=-0.0197;MQ=49.08;MQ0=0;MQRankSum=-1.618;QD=12.60;ReadPosRankSum=-0.021;VQSLOD=1.6931;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:21:36.68:177,37,0	1/1:11,0:11:25.83:135,26,0	1/1:2,6:8:4.05:224,4,0	0/1:4,1:4:23.83:24,0,29	1/1:25,0:25:38.58:168,39,0	1/1:20,0:20:41.68:234,42,0	1/1:30,0:30:70.33:334,70,0	1/1:22,0:22:65.13:447,65,0	1/1:30,1:31:79.10:488,79,0	1/1:23,0:23:66.88:440,67,0	1/1:9,0:9:13.96:94,14,0	1/1:28,0:27:66.75:361,67,0	1/1:19,0:19:45.32:223,45,0	1/1:26,0:26:72.73:378,73,0	1/1:26,0:26:64.85:343,65,0	1/1:16,0:16:43.20:260,43,0	1/1:25,0:25:53.54:264,54,0	1/1:17,0:16:38.31:262,38,0	1/1:20,0:20:52.93:381,53,0	1/1:14,0:14:30.38:157,30,0	1/1:30,0:30:36.83:171,37,0	1/1:7,0:7:16.37:72,16,0	1/1:9,0:9:14.79:66,15,0	1/1:20,0:20:27.63:125,28,0	1/1:22,0:22:36.13:214,36,0	1/1:27,0:27:68.86:427,69,0	1/1:32,0:32:35.98:341,36,0	1/1:6,0:6:17.49:124,17,0
chr10	20099455	.	A	AGGG	2687.31	PASS	AB=0.759;AC=36;AF=0.643;AN=56;BaseQRankSum=10.709;DP=453;FS=11.131;HRun=8;HaplotypeScore=92.5923;InbreedingCoeff=0.8138;MQ=78.62;MQ0=1;MQRankSum=-1.272;QD=8.96;ReadPosRankSum=-0.733;VQSLOD=-0.5573;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:81.15:0,81,1011	0/0:14,0:15:33.02:0,33,411	0/0:14,0:13:8.83:0,9,138	0/1:13,0:15:4.77:5,0,108	0/0:9,0:9:21.05:0,21,275	1/1:6,0:15:10.33:191,10,0	1/1:4,0:15:22.17:164,22,0	1/1:8,0:11:8.69:69,9,0	1/1:4,0:16:10.44:23,10,0	1/1:14,0:16:15.42:131,15,0	1/1:4,0:9:10.21:72,10,0	1/1:7,0:17:20.90:158,21,0	1/1:6,0:13:23.89:185,24,0	1/1:6,0:12:16.21:134,16,0	0/0:27,0:28:69.61:0,70,886	1/1:5,0:17:25.08:180,25,0	1/1:7,1:32:50.40:467,50,0	1/1:7,0:22:25.17:191,25,0	1/1:8,0:16:24.38:187,24,0	1/1:5,0:10:11.93:89,12,0	0/1:7,0:25:7.34:182,0,7	1/1:2,1:10:13.84:108,14,0	1/1:4,0:9:14.72:131,15,0	1/1:4,0:20:31.13:233,31,0	0/0:11,0:11:30.09:0,30,390	0/0:19,0:19:36.10:0,36,470	0/0:21,0:21:60.19:0,60,786	0/0:5,0:5:9.03:0,9,118
chr10	20099747	.	T	TCATC	4177.39	PASS	AB=0.865;AC=26;AF=0.565;AN=46;BaseQRankSum=-7.346;DP=497;FS=12.978;HRun=0;HaplotypeScore=82.5617;InbreedingCoeff=0.6635;MQ=72.44;MQ0=8;MQRankSum=-0.002;QD=15.03;ReadPosRankSum=0.655;VQSLOD=2.3741;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:36.12:0,36,554	0/0:5,0:5:6.02:0,6,92	./.	./.	0/0:3,0:3:6.02:0,6,89	1/1:7,5:15:9.03:211,9,0	0/1:22,0:23:31.14:171,0,31	1/1:40,0:43:8.98:87,9,0	0/0:9,0:14:18:0,18,162	0/0:11,0:11:6.02:0,6,92	./.	1/1:11,6:17:12.04:280,12,0	1/1:13,7:21:21.07:491,21,0	1/1:14,8:23:18.06:421,18,0	0/0:34,0:34:69.22:0,69,1026	1/1:15,11:27:27.09:632,27,0	1/1:14,10:25:21.07:491,21,0	1/1:13,7:21:21.07:475,21,0	1/1:13,3:15:9.03:211,9,0	1/1:0,2:2:6.02:109,6,0	0/1:19,8:27:28.16:333,0,28	1/1:4,1:5:3.01:70,3,0	./.	1/1:7,5:12:9.03:196,9,0	0/0:13,0:13:12.04:0,12,176	0/0:27,0:26:21.07:0,21,323	0/0:14,0:14:12.04:0,12,185	./.
chr10	20102089	.	GA	G	5129	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=17.765;DP=627;FS=19.859;HRun=7;HaplotypeScore=75.6315;InbreedingCoeff=0.9906;MQ=70.15;MQ0=0;MQRankSum=-2.167;QD=26.71;ReadPosRankSum=1.986;VQSLOD=3.4003;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,47:51:99:1438,141,0	1/1:0,13:13:39.09:398,39,0	0/0:19,0:19:45.13:0,45,540	0/0:21,0:19:9.69:0,10,386	1/1:4,26:30:72.15:735,72,0	0/0:9,0:9:27.09:0,27,340	0/0:22,0:22:57.13:0,57,686	0/0:29,0:29:75.24:0,75,944	0/0:21,0:21:57.17:0,57,705	0/0:23,0:23:60.19:0,60,755	0/0:24,0:24:69.21:0,69,852	0/0:26,0:26:78.25:0,78,980	0/0:21,0:21:60.19:0,60,754	0/0:15,0:15:42.13:0,42,528	0/0:30,0:30:87.28:0,87,1095	0/0:19,0:19:45.13:0,45,552	0/0:20,0:20:48.15:0,48,603	0/0:20,0:20:51.16:0,51,641	0/0:12,0:12:36.12:0,36,453	0/0:21,0:21:60.19:0,60,755	0/0:17,0:17:48.15:0,48,603	0/0:26,0:26:72.23:0,72,906	0/0:21,0:21:60.18:0,60,744	0/0:19,0:19:57.18:0,57,717	1/1:1,25:26:72.16:735,72,0	1/1:4,29:33:52.43:841,52,0	1/1:1,24:25:63.14:643,63,0	1/1:5,9:14:36:341,36,0
chr10	20102885	.	G	GAGA	1138.53	PASS	AB=0.962;AC=14;AF=0.250;AN=56;BaseQRankSum=1.159;DP=347;FS=21.930;HRun=0;HaplotypeScore=68.1836;InbreedingCoeff=0.4288;MQ=36.73;MQ0=74;MQRankSum=-4.981;QD=9.41;ReadPosRankSum=3.443;VQSLOD=1.1703;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:22,1:18:45.42:546,45,0	1/1:3,1:4:9.03:135,9,0	0/0:17,0:3:7.56:0,8,81	0/0:20,0:9:16.91:0,17,199	1/1:13,0:10:2.47:12,2,0	0/0:12,0:9:5.75:0,6,52	0/0:18,0:13:17.08:0,17,129	0/0:15,0:9:16.27:0,16,102	0/0:3,0:1:3:0,3,29	0/0:8,0:4:6.83:0,7,43	0/0:7,0:3:3:0,3,25	0/0:12,0:7:8.70:0,9,69	0/0:10,0:8:9.08:0,9,52	0/1:13,0:9:6.86:7,0,38	0/0:9,0:8:24.05:0,24,355	0/0:15,0:10:11.02:0,11,82	0/1:24,0:19:40.01:40,0,64	0/0:16,0:12:16.07:0,16,146	0/0:8,0:5:10.18:0,10,52	0/0:9,0:5:6:0,6,52	0/0:23,0:18:21.13:0,21,131	0/0:4,0:2:2.98:0,3,22	0/0:8,0:6:6.83:0,7,47	0/0:12,0:7:7.72:0,8,50	1/1:8,0:8:14.58:142,15,0	0/1:19,0:9:5.48:61,0,5	0/1:9,2:11:6.23:230,0,6	1/1:6,0:4:9.03:130,9,0
chr10	20102902	.	G	GGAA	3173.01	PASS	AB=0.828;AC=42;AF=0.750;AN=56;BaseQRankSum=3.869;DP=412;FS=8.076;HRun=0;HaplotypeScore=67.7559;InbreedingCoeff=0.5901;MQ=37.29;MQ0=78;MQRankSum=1.231;QD=11.62;ReadPosRankSum=2.716;VQSLOD=2.1623;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:17:25.14:210,25,0	1/1:5,0:5:6.86:50,7,0	0/0:45,0:5:11.96:0,12,119	0/0:52,0:9:15.45:0,15,174	0/0:8,0:5:0.46:0,0,1	1/1:18,0:15:20.87:194,21,0	1/1:16,0:13:1.49:246,1,0	0/0:19,0:14:29.99:0,30,256	0/0:5,0:4:3:0,3,25	1/1:8,0:5:8.98:76,9,0	1/1:6,0:5:12.01:109,12,0	1/1:13,0:10:23.92:222,24,0	1/1:9,0:7:9.04:151,9,0	0/1:14,0:9:2.92:84,0,3	0/0:8,0:8:24.05:0,24,355	1/1:13,0:9:5.57:196,6,0	0/1:10,9:18:25.26:120,0,25	1/1:19,0:16:41.49:345,41,0	1/1:13,0:12:35.48:269,35,0	1/1:12,0:8:14.84:119,15,0	1/1:24,0:20:23.06:292,23,0	1/1:5,0:4:9:80,9,0	1/1:7,0:5:11.97:125,12,0	1/1:14,0:9:23.96:237,24,0	1/1:5,0:5:6.62:44,7,0	1/1:14,0:8:8.23:54,8,0	1/1:9,0:9:13.97:101,14,0	1/1:6,0:4:3.88:15,4,0
chr10	20102911	.	G	GGAA	1572.41	PASS	AB=0.964;AC=20;AF=0.357;AN=56;BaseQRankSum=6.004;DP=417;FS=42.573;HRun=0;HaplotypeScore=84.0651;InbreedingCoeff=0.3609;MQ=38.03;MQ0=50;MQRankSum=-8.781;QD=9.59;ReadPosRankSum=2.269;VQSLOD=0.8940;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,9:14:28.81:517,29,0	1/1:4,1:5:9.43:129,9,0	0/0:63,0:6:9.03:0,9,134	0/0:65,0:10:23.45:0,23,310	0/1:3,1:4:0.03:0,0,0	0/1:17,0:16:15.86:16,0,137	0/0:17,0:15:9.23:0,9,187	0/0:18,0:16:27.98:0,28,610	0/0:4,0:4:3.01:0,3,30	0/0:10,0:7:17.24:0,17,101	0/0:5,0:5:14.32:0,14,77	0/0:10,0:9:10.44:0,10,78	0/1:9,0:9:33.06:33,0,93	0/1:11,0:9:9.15:9,0,47	0/0:9,0:9:27.04:0,27,356	0/1:11,0:9:0.69:1,0,75	0/1:16,0:16:4.28:54,0,4	0/0:19,0:17:6.46:0,6,188	0/1:18,0:16:24.81:25,0,124	0/0:7,0:6:1.40:0,1,45	0/1:23,0:22:44.15:44,0,153	0/0:5,0:4:8.57:0,9,44	0/0:7,0:6:7.18:0,7,67	0/0:11,0:9:15.05:0,15,108	1/1:0,4:5:11.78:213,12,0	1/1:6,1:8:16.28:179,16,0	1/1:4,3:10:22.36:325,22,0	1/1:1,3:4:9.03:205,9,0
chr10	20102917	.	G	GA	179.86	PASS	AB=0.789;AC=5;AF=0.089;AN=56;BaseQRankSum=4.605;DP=421;FS=9.891;HRun=1;HaplotypeScore=77.6571;InbreedingCoeff=-0.0155;MQ=41.53;MQ0=36;MQRankSum=-3.564;QD=3.83;ReadPosRankSum=0.184;VQSLOD=-0.5824;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:14,3:13:15.01:15,0,234	0/0:5,0:5:8.59:0,9,78	0/0:69,0:7:15.05:0,15,209	0/0:74,0:12:33.02:0,33,430	0/0:3,1:4:0:0,0,0	0/0:14,0:13:36.10:0,36,480	0/0:15,0:15:44.80:0,45,578	0/0:19,0:17:51.16:0,51,696	0/0:7,0:7:5.91:0,6,55	0/0:7,0:6:18.06:0,18,248	0/0:5,0:5:15.05:0,15,210	0/0:10,0:10:27.08:0,27,361	0/0:10,0:10:27.08:0,27,355	0/0:15,0:13:36.03:0,36,404	0/0:7,0:7:21.07:0,21,292	0/0:10,0:10:30.10:0,30,405	0/0:17,0:17:20.93:0,21,198	0/0:20,0:18:51.14:0,51,689	0/0:13,0:12:36.12:0,36,500	0/0:6,0:5:14.72:0,15,179	0/0:26,0:25:53.72:0,54,674	0/0:4,0:4:12.02:0,12,150	0/0:7,0:6:18.06:0,18,247	0/0:9,0:9:27.09:0,27,377	0/1:4,1:5:26.09:26,0,67	0/1:6,4:8:51.60:135,0,52	0/1:6,4:9:83.51:84,0,124	0/1:4,1:5:35.43:35,0,72
chr10	20102922	.	A	AAG	854.98	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=8.934;DP=464;FS=49.401;HRun=0;HaplotypeScore=104.6591;InbreedingCoeff=0.9174;MQ=45.17;MQ0=28;MQRankSum=-8.019;QD=9.50;ReadPosRankSum=-1.647;VQSLOD=0.9874;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:23,3:25:26.76:271,27,0	1/1:3,1:7:6.26:68,6,0	0/0:70,0:9:9.05:0,9,153	0/0:77,0:13:29.98:0,30,331	1/1:10,0:10:5.59:51,6,0	0/0:15,0:14:33.58:0,34,430	0/0:16,0:16:42.07:0,42,505	0/0:23,0:21:57.18:0,57,727	0/0:7,0:7:11.95:0,12,118	0/0:7,0:7:18.06:0,18,227	0/0:6,0:6:18.06:0,18,234	0/0:11,0:11:23.52:0,24,312	0/0:10,0:10:27.09:0,27,346	0/0:14,0:13:35.56:0,36,377	0/0:7,0:7:18.06:0,18,232	0/0:9,0:9:27.09:0,27,351	0/0:16,0:16:17.72:0,18,176	0/0:20,0:18:54.09:0,54,662	0/0:13,0:12:24.08:0,24,310	0/0:7,0:6:12.04:0,12,156	0/0:22,0:22:49.36:0,49,605	0/0:6,0:6:18:0,18,200	0/0:8,0:7:18.05:0,18,225	0/0:10,0:10:27.09:0,27,351	1/1:7,1:9:12.01:131,12,0	1/1:15,1:14:28.88:206,29,0	1/1:8,2:10:17.22:159,17,0	1/1:9,1:10:14.90:154,15,0
chr10	20103395	.	TAC	T	6401.55	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=17.652;DP=730;FS=0.331;HRun=0;HaplotypeScore=98.2997;InbreedingCoeff=0.9997;MQ=86.34;MQ0=0;MQRankSum=-4.547;QD=37.88;ReadPosRankSum=3.205;VQSLOD=6.7663;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,42:44:99:1669,117,0	1/1:0,16:16:48.16:688,48,0	0/0:32,0:32:87.58:0,88,1578	0/0:23,0:23:66.18:0,66,1161	1/1:1,25:26:63.21:879,63,0	0/0:26,0:26:78.27:0,78,1421	0/0:29,0:29:78.25:0,78,1400	0/0:25,0:25:72.25:0,72,1314	0/0:29,0:29:84.29:0,84,1534	0/0:39,0:39:99:0,109,1968	0/0:10,0:10:30.10:0,30,550	0/0:31,0:31:87.28:0,87,1552	0/0:21,0:21:63.22:0,63,1147	0/0:26,0:26:78.25:0,78,1393	0/0:31,0:31:87.30:0,87,1588	0/0:32,0:32:87.30:0,87,1588	0/0:33,0:33:96.33:0,96,1760	0/0:27,0:26:78.25:0,78,1389	0/0:13,0:13:36.12:0,36,660	0/0:28,0:28:81.28:0,81,1450	0/0:35,0:35:99:0,105,1924	0/0:24,0:24:66.23:0,66,1210	0/0:15,0:15:45.15:0,45,825	0/0:32,0:32:87.30:0,87,1586	1/1:2,21:23:66.22:932,66,0	1/1:1,25:26:75.25:1075,75,0	1/1:1,21:22:54.03:773,54,0	1/1:3,9:12:27.09:387,27,0
chr10	20105590	.	GC	G	445.18	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.342;DP=591;FS=14.794;HRun=4;HaplotypeScore=62.0733;InbreedingCoeff=0.9954;MQ=96.62;MQ0=0;MQRankSum=-3.150;QD=27.82;ReadPosRankSum=2.711;VQSLOD=2.1839;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:90.30:0,90,1259	0/0:12,0:12:30.10:0,30,419	0/0:30,0:30:84.22:0,84,1102	0/0:29,0:29:72.16:0,72,934	0/0:21,0:21:60.18:0,60,808	0/0:21,0:21:51.17:0,51,714	0/0:20,0:20:60.20:0,60,839	0/0:20,0:20:57.19:0,57,798	1/1:0,16:16:45.14:540,45,0	0/0:18,0:18:54.16:0,54,717	0/0:18,0:18:45.11:0,45,608	0/0:18,0:18:54.18:0,54,756	0/0:20,0:20:60.20:0,60,840	0/0:21,0:21:60.20:0,60,839	0/0:22,0:22:66.22:0,66,924	0/0:26,0:26:72.23:0,72,991	0/0:32,0:32:90.29:0,90,1243	0/0:17,0:17:51.15:0,51,696	0/0:25,0:25:66.18:0,66,899	0/0:24,0:24:60.16:0,60,787	0/0:25,0:25:63.21:0,63,882	0/0:17,0:17:48.16:0,48,671	0/0:18,0:18:45.60:0,46,612	0/0:23,0:23:69.23:0,69,966	0/0:21,0:21:60.20:0,60,835	0/0:22,0:22:57.18:0,57,784	0/0:13,0:13:39.13:0,39,546	0/0:8,0:8:21.07:0,21,294
chr10	20105811	.	A	AG	19017.50	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-9.783;DP=714;FS=3.913;HRun=6;HaplotypeScore=68.0390;InbreedingCoeff=0.9988;MQ=82.71;MQ0=0;MQRankSum=-3.232;QD=31.28;ReadPosRankSum=5.957;VQSLOD=4.9407;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:0,31:31:90.29:1132,90,0	1/1:0,18:18:51.04:641,51,0	0/0:31,0:29:47.22:0,47,492	0/0:22,0:22:36.86:0,37,405	1/1:1,32:33:93.30:1170,93,0	1/1:1,30:31:78.25:981,78,0	1/1:3,19:22:42.13:528,42,0	0/0:24,0:24:69.15:0,69,700	1/1:1,18:19:48.15:603,48,0	1/1:4,30:34:90.26:1113,90,0	1/1:4,35:40:87.26:1077,87,0	1/1:1,28:29:75.24:943,75,0	1/1:0,19:19:54.17:676,54,0	1/1:0,26:26:69.22:864,69,0	0/0:29,0:29:78.11:0,78,776	1/1:2,18:20:48.15:603,48,0	1/1:2,17:19:48.15:604,48,0	1/1:4,11:15:24.08:302,24,0	1/1:1,22:23:66.11:770,66,0	1/1:1,21:22:60.15:734,60,0	1/1:1,29:30:75.24:943,75,0	1/1:3,23:26:72.06:862,72,0	1/1:4,26:30:72.23:904,72,0	1/1:0,23:23:57.18:716,57,0	1/1:1,22:23:63.20:792,63,0	1/1:4,30:34:90.27:1115,90,0	1/1:0,22:22:50.99:641,51,0	1/1:3,15:18:24.08:302,24,0
chr10	20106114	.	CT	C	6446.66	PASS	AB=0.971;AC=35;AF=0.625;AN=56;BaseQRankSum=-8.196;DP=621;FS=7.877;HRun=11;HaplotypeScore=77.7847;InbreedingCoeff=0.9181;MQ=74.69;MQ0=3;MQRankSum=-1.409;QD=16.74;ReadPosRankSum=2.223;VQSLOD=5.6425;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:31:51.65:0,52,302	0/0:2,0:8:17.08:0,17,86	0/0:44,0:21:13.61:0,14,163	0/1:32,1:21:16.47:16,0,262	0/0:10,0:33:58.66:0,59,388	1/1:3,25:28:59.92:493,60,0	1/1:2,25:27:50.94:419,51,0	0/0:29,0:29:59.66:0,60,584	1/1:2,17:19:38.93:320,39,0	1/1:7,23:31:67.88:540,68,0	1/1:2,26:28:68.74:551,69,0	1/1:0,13:13:26.97:222,27,0	1/1:4,16:20:35.95:296,36,0	1/1:2,11:13:29.95:245,30,0	0/0:17,0:18:38.93:0,39,398	1/1:2,17:19:44.89:363,45,0	1/1:3,24:28:67.96:548,68,0	1/1:1,12:13:26.97:222,27,0	1/1:7,20:27:59.87:487,60,0	1/1:5,14:20:43.88:343,44,0	1/1:2,11:14:32:252,32,0	1/1:1,17:18:50.93:418,51,0	1/1:1,23:24:65.91:541,66,0	1/1:1,9:10:20.97:172,21,0	0/0:2,0:12:28.61:0,29,160	0/0:3,1:25:35.84:0,36,279	0/0:7,0:29:60.02:0,60,334	0/0:1,0:7:17.08:0,17,86
chr10	20106935	.	AGTGTGTATGT	A	2121.45	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=8.972;DP=671;FS=1.401;HRun=0;HaplotypeScore=190.1803;InbreedingCoeff=0.9505;MQ=74.06;MQ0=10;MQRankSum=2.105;QD=14.94;ReadPosRankSum=1.856;VQSLOD=2.7611;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:38,1:38:80.54:743,81,0	1/1:6,0:7:14.95:170,15,0	0/0:51,0:38:58.54:0,59,773	0/0:38,0:28:61.54:0,62,582	1/1:16,1:18:38.83:313,39,0	0/0:18,0:18:41.41:0,41,344	0/0:25,0:24:65.80:0,66,614	0/0:24,0:24:50.40:0,50,465	1/1:13,0:12:8.46:133,8,0	0/0:33,0:32:88.29:0,88,942	0/0:8,0:8:14.99:0,15,187	0/0:24,0:24:56.19:0,56,674	0/0:21,0:21:47.90:0,48,587	0/0:20,0:20:53.82:0,54,632	0/0:28,0:28:77.91:0,78,1156	0/0:29,0:30:34.73:0,35,702	0/0:33,0:33:66.53:0,67,704	0/0:20,0:19:53.14:0,53,478	0/0:19,0:19:53.99:0,54,589	0/0:19,0:19:35.74:0,36,399	0/0:53,0:52:99:0,116,1307	0/0:17,0:17:33:0,33,447	0/0:16,0:16:35.94:0,36,323	0/0:32,0:31:80.27:0,80,883	1/1:1,19:20:3.01:96,3,0	1/1:1,22:23:59.88:556,60,0	1/1:14,0:13:25.28:193,25,0	1/1:7,0:7:14.95:116,15,0
chr10	20106938	.	GTGTA	G	2040.08	PASS	AB=0.972;AC=21;AF=0.375;AN=56;BaseQRankSum=10.978;DP=678;FS=12.207;HRun=0;HaplotypeScore=120.1332;InbreedingCoeff=0.5531;MQ=70.43;MQ0=10;MQRankSum=1.211;QD=8.61;ReadPosRankSum=-0.495;VQSLOD=2.1423;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:36,0:34:80.39:661,80,0	1/1:6,0:6:14.95:128,15,0	0/0:47,0:34:58.48:0,58,771	0/0:37,0:27:60.32:0,60,573	1/1:17,0:17:38.74:293,39,0	0/1:21,0:21:4.30:4,0,242	0/0:26,0:25:52.83:0,53,487	0/0:23,0:23:50.69:0,51,432	1/1:13,0:12:23.95:194,24,0	0/1:31,6:36:37.21:37,0,557	0/1:8,0:8:37.40:37,0,55	0/0:24,0:24:8.33:0,8,349	0/0:24,0:24:4.74:0,5,285	0/0:22,0:22:40.67:0,41,363	0/0:30,0:30:75.51:0,76,688	0/0:29,0:29:35.68:0,36,522	0/0:33,0:33:44.19:0,44,429	0/1:22,0:21:43.01:43,0,296	0/0:20,0:20:56.64:0,57,480	0/0:19,0:19:0.60:0,1,190	0/0:56,0:55:37.40:0,37,806	0/1:15,0:15:9.33:9,0,209	0/0:17,0:17:36.40:0,36,293	0/0:34,0:33:45.50:0,45,534	1/1:19,0:19:3.01:36,3,0	1/1:23,0:23:49.84:483,50,0	1/1:13,0:12:25.64:195,26,0	1/1:7,0:7:14.95:116,15,0
chr10	20106942	.	ATGTG	A	918.28	PASS	AB=0.965;AC=31;AF=0.596;AN=52;BaseQRankSum=0.935;DP=717;FS=1.294;HRun=0;HaplotypeScore=131.6810;InbreedingCoeff=0.1243;MQ=65.77;MQ0=11;MQRankSum=1.356;QD=1.78;ReadPosRankSum=3.733;VQSLOD=2.5178;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:39,0:36:2.99:23,3,0	1/1:5,0:5:3:28,3,0	0/0:44,0:31:0.47:0,0,1	./.	0/0:16,0:16:2.99:0,3,24	1/1:18,1:22:6.49:91,6,0	1/1:29,0:29:4.72:34,5,0	0/0:23,0:23:5.87:0,6,36	0/0:15,0:14:6.45:0,6,48	0/1:39,0:38:0.78:109,0,1	1/1:3,5:8:6.02:92,6,0	1/1:25,1:26:5.73:73,6,0	0/1:22,6:28:19.66:39,0,20	1/1:24,0:25:11.47:104,11,0	0/0:30,0:30:18.02:0,18,260	0/1:30,0:30:15.07:34,0,15	1/1:25,8:33:2.10:44,2,0	0/1:26,0:25:14.57:54,0,15	0/1:26,0:26:3.58:16,0,4	1/1:14,6:20:5.95:67,6,0	0/1:62,0:61:19.57:99,0,20	1/1:15,0:15:3.99:42,4,0	0/0:17,0:17:3:0,3,25	0/1:38,2:40:13.61:64,0,14	1/1:19,0:19:3:27,3,0	1/1:23,0:23:3:27,3,0	./.	0/0:7,0:7:2.98:0,3,21
chr10	20107619	.	AACAC	A	333.96	PASS	AB=0.958;AC=3;AF=0.058;AN=52;BaseQRankSum=-2.072;DP=594;FS=4.538;HRun=0;HaplotypeScore=135.8514;InbreedingCoeff=0.4520;MQ=68.42;MQ0=12;MQRankSum=0.183;QD=7.77;ReadPosRankSum=0.871;VQSLOD=2.4673;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:8.06:0,8,101	0/0:12,0:12:12.04:0,12,221	./.	./.	0/0:17,0:17:6.02:0,6,89	0/0:28,0:27:32.26:0,32,524	0/0:24,0:24:18.06:0,18,277	0/0:24,0:22:16.60:0,17,200	1/1:8,12:20:27.09:422,27,0	0/0:22,0:23:18.06:0,18,263	0/0:17,0:17:17.09:0,17,236	0/0:17,0:17:21.07:0,21,344	0/0:14,0:14:12.04:0,12,169	0/0:24,0:24:36.12:0,36,566	0/1:22,1:23:14.14:14,0,580	0/0:16,0:15:24.08:0,24,393	0/0:15,0:15:14.08:0,14,202	0/0:25,0:25:27.09:0,27,409	0/0:14,0:14:12.04:0,12,186	0/0:24,0:23:37.19:0,37,543	0/0:19,0:18:36.11:0,36,546	0/0:28,0:27:18.06:0,18,294	0/0:19,0:19:14.18:0,14,243	0/0:19,0:18:18.06:0,18,294	0/0:12,0:27:3.01:0,3,52	0/0:20,0:19:36.54:0,37,449	0/0:18,0:17:20.88:0,21,359	0/0:11,0:17:14.99:0,15,173
chr10	20107645	.	C	CACAT	8883.86	PASS	AB=0.931;AC=37;AF=0.661;AN=56;BaseQRankSum=-6.809;DP=660;FS=2.524;HRun=0;HaplotypeScore=110.7398;InbreedingCoeff=0.3895;MQ=56.49;MQ0=21;MQRankSum=2.816;QD=19.02;ReadPosRankSum=8.026;VQSLOD=3.9197;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:37:25.52:0,26,282	0/1:9,0:9:35.05:35,0,51	0/0:26,0:6:8.82:0,9,66	0/0:43,0:18:32.62:0,33,265	0/1:8,0:8:26.05:26,0,59	1/1:2,28:33:24.06:750,24,0	1/1:4,21:28:0.07:325,0,0	0/0:32,0:30:73.05:0,73,604	0/0:24,0:24:50.69:0,51,498	1/1:7,20:27:45.20:562,45,0	0/1:1,15:19:3.44:196,0,3	1/1:3,17:20:21.07:564,21,0	1/1:1,14:18:13.91:313,14,0	1/1:4,16:22:39.11:924,39,0	0/0:27,0:27:71.91:0,72,845	1/1:3,14:17:24.06:644,24,0	1/1:2,15:18:11.89:322,12,0	1/1:5,15:21:18.35:445,18,0	1/1:5,13:20:27.16:482,27,0	1/1:4,21:24:36.07:892,36,0	1/1:6,20:26:13.96:809,14,0	1/1:8,22:30:2.99:442,3,0	1/1:0,13:15:17.65:362,18,0	1/1:7,17:23:10.10:472,10,0	0/1:27,0:27:23.13:23,0,64	0/1:20,0:19:80.98:166,0,81	0/1:19,0:18:99:121,0,120	0/1:13,0:13:9.70:10,0,129
chr10	20107647	.	C	CAT	2932.27	PASS	AB=0.986;AC=22;AF=0.393;AN=56;BaseQRankSum=7.812;DP=644;FS=0.424;HRun=0;HaplotypeScore=111.7027;InbreedingCoeff=0.2062;MQ=56.51;MQ0=21;MQRankSum=1.409;QD=8.06;ReadPosRankSum=8.944;VQSLOD=2.5229;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:35:33.21:0,33,294	0/0:9,0:9:9.02:0,9,67	0/0:27,0:7:8.74:0,9,70	0/0:42,0:18:26.69:0,27,285	0/1:8,0:8:1.40:1,0,59	1/1:33,0:32:23.37:275,23,0	0/1:28,0:28:0.16:119,0,0	0/0:33,0:31:85.06:0,85,711	0/0:24,0:24:50.31:0,50,387	0/1:25,0:25:99:209,0,135	0/1:18,0:18:5.37:82,0,5	0/1:19,0:19:21.87:194,0,22	1/1:17,0:17:13.83:127,14,0	0/1:19,0:20:6.45:310,0,6	0/0:25,0:25:71.84:0,72,732	1/1:17,0:16:2.12:228,2,0	1/1:17,0:17:12.50:127,13,0	1/1:20,2:22:3.42:250,3,0	0/1:21,0:20:99:129,0,139	0/1:24,1:23:1.88:328,0,2	0/1:28,0:26:13.30:294,0,13	0/1:27,1:27:3.29:150,0,3	0/1:15,0:15:0.06:116,0,0	0/1:22,1:21:39.85:163,0,40	0/0:28,0:28:2.39:0,2,66	0/0:20,0:19:32.85:0,33,180	0/0:20,0:19:30.48:0,30,199	0/0:13,0:13:15.61:0,16,146
chr10	20108161	.	AT	A	348.78	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.159;DP=630;FS=1.599;HRun=11;HaplotypeScore=63.8747;InbreedingCoeff=0.7589;MQ=70.47;MQ0=1;MQRankSum=0.054;QD=15.85;ReadPosRankSum=1.825;VQSLOD=4.5423;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,123,1289	0/0:7,0:7:21.05:0,21,224	0/0:6,0:6:2.84:0,3,14	0/0:11,0:11:8.91:0,9,66	0/0:18,2:20:15.55:0,16,415	0/0:21,0:21:54.14:0,54,576	0/0:26,0:26:63.16:0,63,672	0/0:32,1:33:53.53:0,54,763	1/1:1,21:22:53.94:443,54,0	0/0:26,0:26:66.17:0,66,704	0/0:13,0:13:30.08:0,30,320	0/0:24,2:26:13.84:0,14,539	0/0:21,0:21:51.13:0,51,542	0/0:23,0:23:57.11:0,57,591	0/0:37,1:38:69.38:0,69,907	0/0:33,0:33:90.16:0,90,933	0/0:21,0:21:60.15:0,60,640	0/0:23,0:23:66.11:0,66,674	0/0:17,1:19:11.29:0,11,310	0/0:25,0:25:66.17:0,66,704	0/0:19,0:18:45.11:0,45,480	0/0:23,0:23:66.15:0,66,695	0/0:14,0:14:36.08:0,36,377	0/0:25,0:25:72.18:0,72,768	0/0:16,1:17:17.46:0,17,391	0/0:30,0:30:78.16:0,78,802	0/0:27,0:27:66.14:0,66,691	0/0:15,0:16:48.11:0,48,505
chr10	20109058	.	T	TACAC	19160.56	PASS	AB=0.978;AC=38;AF=0.679;AN=56;BaseQRankSum=-13.777;DP=983;FS=15.474;HRun=0;HaplotypeScore=253.1191;InbreedingCoeff=0.5605;MQ=58.16;MQ0=1;MQRankSum=2.534;QD=24.72;ReadPosRankSum=0.456;VQSLOD=3.2907;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:24:15.22:15,0,26	0/0:19,0:19:24.89:0,25,249	0/0:33,0:27:38.62:0,39,499	0/1:26,0:21:1.12:1,0,379	0/1:23,0:23:29.43:29,0,74	1/1:15,21:36:34.60:755,35,0	1/1:10,26:37:32.65:813,33,0	1/1:23,0:46:45.47:689,45,0	0/0:5,0:47:70.12:0,70,766	1/1:12,33:47:99:2258,108,0	1/1:5,18:24:33.03:756,33,0	1/1:17,33:53:73.10:1645,73,0	1/1:16,28:47:68.39:1564,68,0	1/1:14,38:53:50.58:1689,51,0	0/0:54,0:54:99:0,129,2078	1/1:12,35:48:72.05:1755,72,0	1/1:11,4:15:21.07:508,21,0	0/1:11,2:13:8.87:242,0,9	1/1:11,7:19:10.17:533,10,0	1/1:12,31:44:56.03:1326,56,0	1/1:15,44:66:65.30:1503,65,0	1/1:6,17:24:44.82:1040,45,0	1/1:7,21:31:36.12:887,36,0	1/1:13,34:48:45.15:1110,45,0	0/0:32,0:32:17.52:0,18,228	0/1:29,0:29:31.40:31,0,496	0/0:22,0:23:26.50:0,26,442	0/1:21,0:21:10.08:10,0,192
chr10	20109110	.	CTG	C	1239.31	PASS	AB=0.643;AC=11;AF=0.196;AN=56;BaseQRankSum=10.421;DP=1044;FS=7.032;HRun=0;HaplotypeScore=314.3343;InbreedingCoeff=0.8484;MQ=65.94;MQ0=25;MQRankSum=-6.937;QD=9.76;ReadPosRankSum=-0.490;VQSLOD=2.2736;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:8,10:18:3.56:14,0,4	1/1:7,13:18:15.25:156,15,0	0/0:106,0:55:42.47:0,42,998	0/0:124,1:48:53.29:0,53,1111	0/0:10,13:23:0:0,0,0	0/0:31,0:31:38.63:0,39,588	0/0:26,0:24:42.08:0,42,640	0/0:48,0:48:99:0,117,2241	0/0:43,0:43:77.63:0,78,1322	0/0:33,0:33:94.55:0,95,1436	0/0:22,0:22:36.08:0,36,583	0/0:44,0:44:72.21:0,72,1188	0/0:36,0:36:92.38:0,92,1315	0/0:44,0:44:59.42:0,59,873	0/0:56,0:55:99:0,147,2571	0/0:29,0:28:24.23:0,24,578	0/0:18,0:18:17.77:0,18,262	0/0:13,0:13:33:0,33,439	0/0:19,0:19:47.87:0,48,863	0/0:33,0:33:47.52:0,48,763	0/0:62,0:60:93.21:0,93,1461	0/0:30,0:30:51.11:0,51,818	0/0:34,1:35:17.31:0,17,573	0/0:39,0:39:38.86:0,39,655	1/1:16,16:32:2.94:18,3,0	1/1:10,11:21:52.08:560,52,0	1/1:8,12:20:27.23:349,27,0	1/1:10,6:15:26.94:308,27,0
chr10	20109117	.	TCACACA	T	745.92	PASS	AB=0.971;AC=7;AF=0.125;AN=56;BaseQRankSum=9.231;DP=1007;FS=2.306;HRun=0;HaplotypeScore=327.9495;InbreedingCoeff=0.4407;MQ=62.94;MQ0=29;MQRankSum=-7.611;QD=7.77;ReadPosRankSum=-1.120;VQSLOD=1.6123;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:1.25:0,1,15	1/1:16,0:15:17.42:183,17,0	0/0:94,0:45:46.67:0,47,1372	0/0:118,0:45:49.46:0,49,1602	0/0:23,1:24:0.47:0,0,1	0/0:29,0:29:31.16:0,31,414	0/0:22,0:20:26.92:0,27,464	0/0:49,0:49:91.87:0,92,2350	0/0:43,0:43:32.26:0,32,1298	0/0:31,0:29:19.29:0,19,1284	0/0:21,0:21:29.78:0,30,541	0/0:46,0:46:34.50:0,34,972	0/0:36,0:36:11.03:0,11,967	0/0:37,0:37:13.35:0,13,601	0/0:55,0:54:99:0,141,4024	0/0:27,0:26:35.20:0,35,696	0/1:23,0:23:4.77:5,0,203	0/0:14,0:14:12.28:0,12,305	0/0:19,0:19:51.03:0,51,1035	0/0:35,0:35:44.01:0,44,690	0/0:59,0:56:74.56:0,75,1299	0/0:29,0:29:38.79:0,39,703	0/0:32,0:32:29.51:0,30,510	0/0:42,0:42:37.96:0,38,549	0/0:25,1:26:0.39:0,0,0	0/1:19,2:21:50.95:335,0,51	1/1:19,1:20:6.10:200,6,0	0/1:15,0:14:99:152,0,136
chr10	20109123	.	ACTCTCT	A	6160.04	PASS	AB=0.712;AC=36;AF=0.643;AN=56;BaseQRankSum=-2.624;DP=936;FS=9.024;HRun=0;HaplotypeScore=282.4716;InbreedingCoeff=0.6942;MQ=58.02;MQ0=28;MQRankSum=0.355;QD=10.88;ReadPosRankSum=2.268;VQSLOD=2.4116;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:3.70:0,4,26	0/0:20,0:18:8.94:0,9,36	0/0:78,0:32:8.42:0,8,82	0/0:106,0:35:9.50:0,10,189	0/0:27,0:27:0:0,0,0	1/1:10,10:28:17.98:309,18,0	1/1:15,1:16:8.85:138,9,0	0/1:30,0:44:79.99:820,0,80	1/1:33,1:41:32.11:488,32,0	1/1:22,4:27:25.49:471,25,0	1/1:12,4:19:9.03:168,9,0	1/1:24,16:43:24.02:437,24,0	1/1:22,8:34:47.80:840,48,0	1/1:13,13:33:15.24:235,15,0	0/0:44,0:53:79.43:0,79,2078	1/1:13,6:25:10.36:176,10,0	1/1:3,19:24:14.88:260,15,0	1/1:9,1:13:19.31:328,19,0	1/1:13,0:14:12.04:205,12,0	1/1:15,8:30:9.42:177,9,0	1/1:49,1:49:23.40:445,23,0	1/1:16,7:27:15.05:262,15,0	0/1:16,9:31:23.96:96,0,24	1/1:25,6:36:15.05:305,15,0	1/1:23,0:23:0.66:1,1,0	0/0:22,0:22:41.59:0,42,571	0/0:22,0:22:20.33:0,20,301	0/0:16,0:15:24.60:0,25,366
chr10	20109143	.	TCTCTCTCTCA	T	6487.45	PASS	AB=0.995;AC=26;AF=0.464;AN=56;BaseQRankSum=1.207;DP=803;FS=48.733;HRun=0;HaplotypeScore=258.4945;InbreedingCoeff=-0.3423;MQ=46.01;MQ0=23;MQRankSum=-2.619;QD=10.60;ReadPosRankSum=9.055;VQSLOD=1.9232;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:0.89:0,1,4	0/1:14,0:12:9.76:10,0,18	0/0:28,0:7:9.09:0,9,108	0/0:45,0:6:12.01:0,12,325	0/1:24,0:24:0:0,0,0	0/1:31,0:31:99:323,0,107	0/1:16,0:14:99:165,0,115	0/1:44,0:40:99:1294,0,289	1/1:23,9:32:43.89:1085,44,0	0/1:24,0:22:99:455,0,137	0/1:14,1:15:30.92:196,0,31	0/1:43,0:43:99:279,0,189	0/1:40,0:40:99:529,0,312	0/1:33,0:33:99:178,0,101	0/0:54,0:53:99:0,132,3717	0/1:30,1:30:80.81:81,0,162	0/1:25,0:25:36.11:145,0,36	0/1:16,0:16:99:343,0,115	1/1:6,0:6:12.04:219,12,0	1/1:23,0:23:0.50:137,0,0	0/1:56,0:51:99:477,0,185	0/1:27,0:27:99:258,0,111	0/1:27,0:27:99:113,0,107	0/1:42,0:42:99:186,0,114	1/1:21,0:21:0.71:1,1,0	0/1:22,0:22:14.32:14,0,640	0/0:21,0:21:20.44:0,20,358	0/0:18,0:17:14.74:0,15,472
chr10	20109151	.	TCACACACACACACACA	T	1755.53	PASS	AB=0.676;AC=12;AF=0.214;AN=56;BaseQRankSum=3.821;DP=793;FS=4.648;HRun=0;HaplotypeScore=322.0169;InbreedingCoeff=0.5580;MQ=43.57;MQ0=18;MQRankSum=-6.054;QD=13.00;ReadPosRankSum=2.082;VQSLOD=1.1521;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:12,11:24:3.25:134,3,0	1/1:9,0:13:6.02:185,6,0	0/0:22,0:2:6.02:0,6,222	0/0:30,0:4:6.02:0,6,372	1/1:7,12:21:0.47:1,0,0	0/0:32,0:32:36:0,36,1849	0/0:20,0:18:35.67:0,36,2115	0/0:40,0:34:74.58:0,75,2048	0/0:31,0:32:50.88:0,51,1622	0/0:28,0:28:80.80:0,81,3806	0/0:17,0:17:18.06:0,18,943	0/0:44,0:44:61.23:0,61,3297	0/0:41,0:41:96.56:0,97,4805	0/0:36,0:36:51.65:0,52,2623	0/0:50,0:50:99:0,106,5644	0/0:34,0:33:48.32:0,48,2932	0/0:25,0:25:18.04:0,18,851	0/0:17,0:17:42.10:0,42,1859	0/0:9,0:8:23.87:0,24,720	0/0:25,0:25:22.48:0,22,1094	0/0:59,0:54:74.97:0,75,3737	0/0:28,0:28:38.71:0,39,1933	0/0:25,0:25:14.96:0,15,676	0/0:43,0:43:43.04:0,43,2242	1/1:9,9:18:0.47:1,0,0	1/1:9,11:21:17.09:896,17,0	0/1:10,9:21:19.38:163,0,19	0/1:9,7:16:21.55:511,0,22
chr10	20112228	.	C	CA	6100.29	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=0.768;DP=534;FS=0.644;HRun=10;HaplotypeScore=144.3451;InbreedingCoeff=0.8403;MQ=67.30;MQ0=0;MQRankSum=-7.107;QD=12.53;ReadPosRankSum=-0.404;VQSLOD=3.2375;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,34:44:91.25:942,91,0	1/1:2,9:12:29.91:302,30,0	0/0:18,0:20:21.65:0,22,230	0/0:6,0:7:10.93:0,11,71	1/1:4,10:14:3.59:210,4,0	1/1:14,0:17:20.37:118,20,0	1/1:21,0:23:37.36:193,37,0	1/1:11,26:40:58.92:739,59,0	1/1:10,0:21:29.95:143,30,0	1/1:15,0:20:40.68:242,41,0	1/1:16,0:18:20.27:103,20,0	1/1:16,0:15:23.15:126,23,0	1/1:18,0:18:28.48:163,28,0	1/1:10,1:12:8.65:46,9,0	0/0:18,1:20:20.98:0,21,368	1/1:13,0:13:15.38:84,15,0	1/1:15,0:15:26.12:147,26,0	1/1:11,0:13:17.69:84,18,0	1/1:15,0:16:26.99:135,27,0	1/1:26,1:29:26.53:136,27,0	1/1:9,0:13:12.70:59,13,0	1/1:21,0:25:34.20:191,34,0	1/1:18,0:20:12.08:54,12,0	1/1:9,0:12:9.08:47,9,0	1/1:4,17:21:8.02:495,8,0	1/1:4,16:20:48.12:512,48,0	1/1:5,17:23:36.05:543,36,0	1/1:2,9:11:27.07:288,27,0
chr10	20112719	.	T	TGTGA	9706.22	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=14.774;DP=478;FS=5.221;HRun=0;HaplotypeScore=157.5803;InbreedingCoeff=0.9661;MQ=88.53;MQ0=0;MQRankSum=-15.829;QD=40.78;ReadPosRankSum=7.386;VQSLOD=4.3906;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,141,2866	0/0:10,0:10:30.10:0,30,629	0/0:28,0:28:81.23:0,81,1475	0/0:16,0:16:41.17:0,41,736	0/0:17,0:17:51.18:0,51,1055	1/1:0,10:20:26.28:659,26,0	1/1:0,9:12:27.09:599,27,0	0/0:20,0:20:60.21:0,60,1227	1/1:0,9:15:33.11:726,33,0	1/1:0,8:12:30.05:680,30,0	1/1:0,5:12:15.05:332,15,0	1/1:0,11:21:23.56:777,24,0	1/1:0,11:21:31.33:826,31,0	1/1:1,14:19:45.15:998,45,0	0/0:19,0:19:57.15:0,57,1060	1/1:0,16:22:54.19:1164,54,0	1/1:0,6:12:21.07:444,21,0	1/1:0,3:10:21.07:370,21,0	1/1:0,3:9:24.08:418,24,0	1/1:1,6:12:24.07:470,24,0	1/1:0,3:8:4.63:180,5,0	1/1:1,7:8:21.07:428,21,0	1/1:0,6:14:21.07:437,21,0	1/1:0,4:11:9.03:198,9,0	0/0:17,0:17:51.16:0,51,1025	0/0:33,0:33:99:0,99,1880	0/0:21,0:21:63.20:0,63,1278	0/0:8,0:8:21.07:0,21,425
chr10	20112720	.	C	CCCA	4606.38	PASS	AB=0.725;AC=30;AF=0.536;AN=56;BaseQRankSum=16.303;DP=481;FS=4.017;HRun=0;HaplotypeScore=169.3877;InbreedingCoeff=0.7110;MQ=87.66;MQ0=0;MQRankSum=-14.844;QD=18.96;ReadPosRankSum=8.112;VQSLOD=4.2252;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,138,2519	0/0:11,0:11:30.10:0,30,559	0/0:27,0:27:72.25:0,72,1301	0/0:16,0:16:44.72:0,45,661	0/0:18,0:18:51.17:0,51,933	1/1:11,10:21:13.97:325,14,0	1/1:4,9:13:27.08:307,27,0	0/0:20,0:20:60.21:0,60,1105	1/1:6,9:15:14.21:294,14,0	0/1:5,8:13:11.43:285,0,11	1/1:7,5:12:15.04:165,15,0	1/1:10,11:21:38.83:409,39,0	1/1:10,11:21:31.95:414,32,0	1/1:4,14:19:45.13:506,45,0	0/0:18,0:18:48.16:0,48,883	1/1:6,16:22:54.14:606,54,0	1/1:6,6:12:21.06:240,21,0	0/1:7,3:10:50.57:88,0,51	0/1:8,3:11:63.11:92,0,63	1/1:6,6:12:23.90:251,24,0	0/1:5,3:8:6.76:80,0,7	1/1:1,7:8:20.99:221,21,0	1/1:8,6:14:21.05:226,21,0	1/1:7,4:11:8.56:99,9,0	0/0:17,0:17:48.16:0,48,895	0/0:32,0:32:87.30:0,87,1616	0/0:20,0:20:60.21:0,60,1110	0/0:8,0:8:21.07:0,21,375
chr10	20112721	.	G	GACTA	14042.73	PASS	AB=0.760;AC=33;AF=0.589;AN=56;BaseQRankSum=16.582;DP=560;FS=0.689;HRun=0;HaplotypeScore=226.9718;InbreedingCoeff=0.9137;MQ=80.01;MQ0=0;MQRankSum=-17.029;QD=42.94;ReadPosRankSum=6.332;VQSLOD=4.8560;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,144,2841	0/0:11,0:11:33.09:0,33,651	0/0:25,0:25:72.23:0,72,1440	0/0:15,0:15:40.53:0,41,704	0/0:18,0:18:54.17:0,54,1082	1/1:21,10:31:71.26:1457,71,0	1/1:10,9:19:30.67:838,31,0	0/0:22,0:22:60.20:0,60,1220	1/1:9,9:18:29.96:795,30,0	1/1:9,8:17:41.63:907,42,0	1/1:14,5:19:24.08:499,24,0	1/1:17,11:28:66.14:1433,66,0	1/1:12,11:23:9.33:989,9,0	1/1:10,15:25:65.74:1435,66,0	0/0:17,0:17:51.16:0,51,1030	1/1:9,16:25:44.20:1418,44,0	1/1:11,6:17:6.95:615,7,0	1/1:7,3:10:21.07:471,21,0	1/1:17,3:20:15.34:734,15,0	0/1:13,6:19:6.46:573,0,6	1/1:10,3:13:17.95:353,18,0	1/1:4,7:11:24.07:468,24,0	1/1:11,6:17:20.13:616,20,0	1/1:11,4:15:21.07:442,21,0	0/0:16,0:16:48.16:0,48,1005	0/0:31,0:31:87.30:0,87,1820	0/0:20,0:20:60.21:0,60,1253	0/0:8,0:8:24.06:0,24,456
chr10	20114542	.	A	AAAC	12393.14	PASS	AB=1.000;AC=33;AF=0.589;AN=56;BaseQRankSum=-2.170;DP=729;FS=0.372;HRun=0;HaplotypeScore=148.9940;InbreedingCoeff=0.9198;MQ=68.31;MQ0=1;MQRankSum=4.345;QD=28.75;ReadPosRankSum=1.267;VQSLOD=4.7952;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:29.69:0,30,205	0/0:9,0:9:17.85:0,18,126	0/0:40,0:37:31.38:0,31,393	0/0:26,0:25:37.82:0,38,420	0/0:21,0:21:26.68:0,27,181	1/1:10,16:28:33.11:656,33,0	1/1:7,16:23:36.12:712,36,0	0/0:43,0:43:69.10:0,69,726	0/1:23,0:23:25.31:25,0,225	1/1:14,23:38:81.18:1430,81,0	1/1:9,11:20:32.76:547,33,0	1/1:4,15:21:30.03:596,30,0	1/1:11,23:35:56.89:1121,57,0	1/1:8,16:25:33.11:635,33,0	0/0:33,0:33:66.11:0,66,803	1/1:4,19:24:39.13:776,39,0	1/1:8,20:29:45.15:865,45,0	1/1:6,12:18:33.11:626,33,0	1/1:5,12:18:25.17:599,25,0	1/1:9,14:26:38.87:556,39,0	1/1:11,19:31:45.10:841,45,0	1/1:9,12:22:32.92:558,33,0	1/1:2,23:27:37.75:657,38,0	1/1:3,20:23:60.21:1193,60,0	0/0:23,0:23:32.74:0,33,232	0/0:25,0:25:41.71:0,42,303	0/0:31,0:31:59.51:0,60,420	0/0:15,0:15:11.90:0,12,84
chr10	20114560	.	CAACAAT	C	5989.22	PASS	AB=1.000;AC=27;AF=0.482;AN=56;BaseQRankSum=-6.835;DP=727;FS=12.811;HRun=0;HaplotypeScore=203.8290;InbreedingCoeff=0.0092;MQ=62.47;MQ0=2;MQRankSum=-5.723;QD=12.15;ReadPosRankSum=-6.867;VQSLOD=0.5963;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:2,26:28:39.05:766,39,0	1/1:0,14:14:26.34:474,26,0	0/0:37,0:30:73.91:0,74,1084	0/0:24,0:21:53.55:0,54,1185	1/1:2,19:21:52.54:708,53,0	0/1:23,0:23:26.75:27,0,615	0/0:23,0:23:2.68:0,3,723	0/0:40,0:40:99:0,117,2032	0/0:22,0:22:12.19:0,12,1058	0/1:36,0:36:24.44:24,0,1430	0/1:18,0:18:48.81:49,0,548	0/1:27,0:27:94.86:95,0,568	0/0:34,0:34:32:0,32,1178	0/1:25,0:25:27.31:27,0,559	0/0:28,0:28:75.16:0,75,2030	0/1:27,0:27:20.66:21,0,792	0/1:30,0:30:45.75:46,0,760	0/1:20,0:20:22.91:23,0,611	0/1:26,0:26:40.94:41,0,612	0/1:24,0:24:15.93:16,0,800	0/1:33,0:33:20.43:20,0,775	0/1:21,0:21:37.12:37,0,612	0/1:35,0:35:99:142,0,680	0/0:26,0:26:0.27:0,0,1091	1/1:0,22:22:33.11:785,33,0	1/1:1,20:21:60.01:937,60,0	1/1:1,31:33:60.21:1428,60,0	1/1:0,9:9:15.05:324,15,0
chr10	20117306	.	ATTT	A	12307.02	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=4.492;DP=676;FS=9.762;HRun=11;HaplotypeScore=115.4811;InbreedingCoeff=0.9986;MQ=70.15;MQ0=0;MQRankSum=-0.631;QD=29.80;ReadPosRankSum=6.049;VQSLOD=2.9120;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:38:99:0,105,1921	0/0:15,0:17:45.13:0,45,813	0/0:14,0:15:30.06:0,30,450	0/0:14,0:12:26.54:0,27,279	0/0:27,0:28:66.21:0,66,1211	1/1:3,24:27:69.21:906,69,0	1/1:2,24:27:58.73:786,59,0	0/0:8,0:33:71.80:0,72,540	0/0:1,0:21:21.18:0,21,46	1/1:10,32:42:93.23:1193,93,0	1/1:0,18:18:45.07:591,45,0	1/1:6,27:33:78.22:1020,78,0	1/1:3,30:33:81.24:1059,81,0	1/1:1,21:22:60.19:788,60,0	0/0:15,0:17:45.14:0,45,857	1/1:3,29:33:83.76:1060,84,0	1/1:4,21:25:54.14:710,54,0	1/1:1,19:20:51.16:667,51,0	1/1:5,22:27:63.05:771,63,0	1/1:1,22:23:51.12:670,51,0	1/1:3,11:14:21.04:276,21,0	1/1:5,22:27:54.14:709,54,0	1/1:2,19:21:38.76:511,39,0	1/1:3,18:21:45.03:591,45,0	0/0:21,0:22:60.20:0,60,1144	0/0:21,0:23:63.21:0,63,1189	0/0:22,0:24:69.19:0,69,1281	0/0:10,0:11:30.10:0,30,579
chr10	20117619	.	G	GA	4898.17	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-8.002;DP=643;FS=0.354;HRun=7;HaplotypeScore=106.5942;InbreedingCoeff=0.9986;MQ=85.49;MQ0=0;MQRankSum=-0.634;QD=30.81;ReadPosRankSum=2.579;VQSLOD=3.8509;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,27:30:81.25:978,81,0	1/1:3,14:18:45.14:542,45,0	0/0:19,0:19:42.06:0,42,405	0/0:25,0:23:54.03:0,54,508	1/1:3,29:32:72.22:870,72,0	0/0:34,0:34:96.13:0,96,920	0/0:21,0:21:63.10:0,63,608	0/0:24,0:24:57.08:0,57,550	0/0:25,0:25:72.10:0,72,689	0/0:33,0:33:93.14:0,93,894	0/0:14,0:14:36.03:0,36,341	0/0:28,0:28:84.14:0,84,811	0/0:22,0:22:66.11:0,66,637	0/0:28,0:28:72.10:0,72,691	0/0:26,0:26:66.10:0,66,637	0/0:27,0:27:78.12:0,78,753	0/0:20,0:20:60.08:0,60,574	0/0:22,0:22:57.04:0,57,541	0/0:30,0:30:78.07:0,78,738	0/0:23,0:23:57.09:0,57,550	0/0:11,0:11:33.05:0,33,318	0/0:24,0:24:66.10:0,66,637	0/0:12,0:12:36.06:0,36,347	0/0:16,0:16:42.01:0,42,396	1/1:1,22:23:60.18:724,60,0	1/1:1,23:24:43.24:804,43,0	1/1:2,22:24:63.19:761,63,0	1/1:2,6:8:18.53:219,19,0
chr10	20118003	.	G	GTC	383.72	PASS	AB=0.977;AC=20;AF=0.370;AN=54;BaseQRankSum=4.354;DP=682;FS=9.916;HRun=0;HaplotypeScore=204.1607;InbreedingCoeff=-0.1045;MQ=57.19;MQ0=12;MQRankSum=4.045;QD=1.08;ReadPosRankSum=0.031;VQSLOD=1.8782;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:32,2:34:37.18:37,0,175	0/0:11,0:11:18.06:0,18,248	0/0:50,0:28:68.19:0,68,734	0/0:63,0:33:54.91:0,55,584	0/0:34,0:34:56.96:0,57,674	0/1:23,1:23:6.38:6,0,9	0/1:26,0:25:11.78:12,0,27	0/0:46,0:44:99:0,123,1652	0/1:22,0:21:7.16:38,0,7	0/1:18,2:19:17.46:77,0,17	1/1:12,1:13:4.55:29,5,0	0/0:20,0:20:8.85:0,9,42	0/1:26,0:23:34.33:37,0,34	0/1:21,0:21:0.71:1,0,17	0/0:26,0:26:66.19:0,66,908	0/1:15,2:17:14.32:27,0,14	1/1:12,0:12:5.51:38,6,0	0/1:16,0:15:15.12:15,0,16	0/1:18,0:16:24.65:28,0,25	1/1:21,0:21:8.12:78,8,0	0/1:18,0:18:16.21:16,0,26	0/1:25,0:23:40.12:40,0,43	0/1:20,0:20:17.02:38,0,17	./.	0/0:18,0:18:18.05:0,18,239	0/0:25,0:23:16.18:0,16,594	0/1:21,0:21:26.33:26,0,389	0/0:17,0:17:48.14:0,48,613
chr10	20118009	.	GTC	G	2584.09	PASS	AB=0.675;AC=27;AF=0.500;AN=54;BaseQRankSum=6.030;DP=658;FS=16.628;HRun=0;HaplotypeScore=187.2530;InbreedingCoeff=0.6706;MQ=52.71;MQ0=13;MQRankSum=-1.048;QD=9.07;ReadPosRankSum=5.806;VQSLOD=2.0153;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:34:8.05:0,8,110	0/0:12,0:12:18.52:0,19,260	0/0:42,0:21:43.92:0,44,667	0/0:58,0:28:45.79:0,46,562	0/0:37,0:35:44.96:0,45,513	1/1:11,13:23:20.50:237,21,0	1/1:6,20:25:12.04:148,12,0	0/0:47,0:44:99:0,107,1728	0/0:20,1:20:3.46:0,3,27	0/1:9,9:16:11.52:364,0,12	1/1:7,6:13:3.01:39,3,0	0/1:10,8:18:1.92:155,0,2	1/1:8,16:21:33.04:396,33,0	1/1:8,13:21:12.04:146,12,0	0/0:23,0:23:63.22:0,63,1117	1/1:9,8:17:14.68:189,15,0	1/1:4,7:11:15.05:184,15,0	1/1:5,11:15:4.08:210,4,0	0/1:8,8:15:40.86:271,0,41	1/1:9,10:19:12.04:149,12,0	1/1:6,12:17:2.97:20,3,0	1/1:13,13:24:18.04:215,18,0	1/1:9,9:18:6:61,6,0	./.	0/0:18,0:18:15.04:0,15,205	0/0:28,0:26:57.10:0,57,772	0/0:20,0:20:39.12:0,39,575	0/0:17,0:17:45.08:0,45,570
chr10	20118037	.	CTCTCTGTG	C	623.81	PASS	AB=0.956;AC=22;AF=0.458;AN=48;BaseQRankSum=2.043;DP=607;FS=12.985;HRun=0;HaplotypeScore=196.2213;InbreedingCoeff=0.1203;MQ=35.48;MQ0=22;MQRankSum=2.434;QD=1.81;ReadPosRankSum=-2.917;VQSLOD=1.4790;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:28:0.47:0,0,1	0/1:12,0:11:4.79:5,0,15	0/0:18,0:7:14.47:0,14,157	0/0:45,0:11:18.49:0,18,211	1/1:34,0:31:2.99:23,3,0	1/1:19,0:17:3.88:26,4,0	1/1:22,0:20:0.66:12,1,0	0/1:20,25:42:99:444,0,317	0/0:24,0:21:2.14:0,2,9	0/1:22,0:20:37.10:37,0,162	./.	0/0:18,0:17:4.92:0,5,44	0/1:20,0:16:25.17:25,0,36	1/1:24,0:24:8.86:75,9,0	0/0:25,0:25:60.16:0,60,1461	0/0:14,0:14:6.46:0,6,26	0/1:10,0:9:30.34:30,0,51	0/0:9,0:9:9.65:0,10,99	0/1:17,0:17:1.86:2,0,111	1/1:23,0:22:0.47:1,0,0	./.	1/1:22,0:20:5.99:50,6,0	./.	./.	1/1:18,0:18:2.78:23,3,0	0/1:32,0:30:2.82:3,0,401	0/1:23,0:23:6.22:6,0,213	0/0:12,0:11:6.89:0,7,70
chr10	20118041	.	CTG	C	882.27	PASS	AB=0.815;AC=17;AF=0.354;AN=48;BaseQRankSum=4.802;DP=597;FS=0.000;HRun=0;HaplotypeScore=159.6689;InbreedingCoeff=-0.0467;MQ=35.04;MQ0=22;MQRankSum=-7.341;QD=3.04;ReadPosRankSum=3.485;VQSLOD=2.1412;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:20,10:28:0:0,0,0	0/1:8,5:12:1.21:55,0,1	0/0:17,0:7:18.02:0,18,200	0/0:43,0:10:18.65:0,19,198	0/0:23,11:31:2.26:0,2,7	0/1:16,1:16:16.85:17,0,20	0/1:21,0:20:15.58:19,0,16	0/0:45,0:41:99:0,102,922	1/1:7,18:22:11.80:121,12,0	1/1:23,1:22:17.20:181,17,0	./.	0/1:13,3:17:19.29:19,0,36	0/1:18,3:18:47.91:48,0,59	0/0:22,0:24:8.95:0,9,66	0/0:24,0:24:66.03:0,66,1035	0/1:13,0:14:5.31:5,0,17	0/1:9,0:9:7.46:7,0,55	0/1:8,1:8:36.95:49,0,37	0/1:12,2:13:11.52:12,0,55	0/0:21,2:22:5.83:0,6,37	./.	0/0:21,2:20:5.94:0,6,45	./.	./.	0/1:7,8:15:0:0,0,0	0/1:15,15:28:36.36:352,0,36	0/1:15,11:26:34.36:139,0,34	0/0:8,2:9:7.82:0,8,56
chr10	20118051	.	CTG	C	1825.28	PASS	AB=0.955;AC=24;AF=0.571;AN=42;BaseQRankSum=3.942;DP=578;FS=13.335;HRun=0;HaplotypeScore=131.6280;InbreedingCoeff=0.2909;MQ=30.82;MQ0=24;MQRankSum=-6.066;QD=5.70;ReadPosRankSum=-2.491;VQSLOD=1.8318;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:30:0:0,0,0	0/1:14,0:13:6.77:96,0,7	0/0:22,0:5:9:0,9,120	0/0:40,0:6:9:0,9,99	0/1:32,0:30:0:0,0,0	1/1:12,4:14:2.90:16,3,0	1/1:17,5:20:3.01:42,3,0	0/0:34,0:31:71.45:0,71,596	1/1:3,19:19:7.88:71,8,0	1/1:14,9:21:45.57:474,46,0	./.	1/1:14,4:17:8.29:52,8,0	1/1:12,8:16:17.87:179,18,0	./.	0/0:24,0:24:63.04:0,63,1020	1/1:11,2:13:3.01:33,3,0	0/1:7,1:7:12.04:12,0,34	0/1:5,2:6:27.21:74,0,27	1/1:14,3:16:31.93:265,32,0	./.	./.	./.	./.	./.	0/1:15,0:15:0:0,0,0	0/1:33,0:31:33.41:434,0,33	0/1:26,0:26:11.26:218,0,11	0/0:8,0:7:7.72:0,8,48
chr10	20118061	.	CTG	C	632.82	PASS	AB=1.000;AC=23;AF=0.500;AN=46;BaseQRankSum=5.223;DP=613;FS=7.829;HRun=0;HaplotypeScore=149.7223;InbreedingCoeff=0.1853;MQ=30.23;MQ0=28;MQRankSum=0.264;QD=1.71;ReadPosRankSum=-0.801;VQSLOD=2.1201;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:28:1.50:0,1,4	0/1:13,0:12:15.48:18,0,15	0/0:21,0:5:14.64:0,15,149	0/0:36,0:5:8.11:0,8,76	0/1:35,0:32:0:0,0,0	1/1:16,0:14:2.90:16,3,0	1/1:20,0:18:2.37:8,2,0	0/1:39,0:36:82.26:246,0,82	1/1:10,11:18:2.69:48,3,0	1/1:26,0:24:41.30:206,41,0	./.	1/1:21,0:20:5.76:34,6,0	1/1:20,0:16:10.53:34,11,0	./.	0/0:26,0:26:39.45:0,39,704	0/1:16,0:16:0.85:1,0,7	0/1:9,0:8:6.99:30,0,7	0/1:8,0:7:9.47:9,0,90	0/1:19,0:17:10.02:95,0,10	./.	./.	0/1:29,0:26:0:0,0,0	./.	0/1:18,0:17:0.22:0,0,0	0/1:22,0:22:0.02:0,0,0	0/1:38,0:35:19.17:19,0,230	0/0:24,0:24:16.05:0,16,114	0/0:7,0:6:9.75:0,10,53
chr10	20118081	.	CTCTGTGTGTGTG	C	1722.58	PASS	AB=0.972;AC=20;AF=0.455;AN=44;BaseQRankSum=3.940;DP=585;FS=22.473;HRun=0;HaplotypeScore=160.4331;InbreedingCoeff=0.0442;MQ=31.73;MQ0=30;MQRankSum=-0.007;QD=5.20;ReadPosRankSum=-0.175;VQSLOD=1.2081;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:34,0:30:5.69:169,6,0	1/1:14,0:13:15.60:327,16,0	0/0:13,0:5:11.11:0,11,74	0/0:23,0:4:8.70:0,9,54	0/1:36,0:34:0.18:0,0,1	0/0:14,0:12:0.89:0,1,2	./.	0/0:31,0:29:45.49:0,45,268	0/1:22,0:17:6.11:60,0,6	0/1:25,0:22:88.11:161,0,88	./.	0/1:20,0:19:0.80:1,0,10	0/1:20,0:16:2.32:150,0,2	1/1:18,0:18:2.75:36,3,0	0/0:29,0:29:57.06:0,57,1527	1/1:17,0:17:5.38:86,5,0	0/1:7,0:6:7.38:7,0,35	0/1:6,0:5:38.57:48,0,39	0/1:20,0:17:55.49:55,0,76	./.	./.	0/0:25,0:22:2.99:0,3,60	./.	0/0:18,0:16:0:0,0,0	1/1:27,0:27:2.79:88,3,0	0/1:28,13:38:99:643,0,221	0/1:22,1:23:22.75:23,0,104	./.
chr10	20118083	.	CTGTGTGTGTGTGTGTGTG	C	1496.46	PASS	AB=0.849;AC=19;AF=0.452;AN=42;BaseQRankSum=3.183;DP=573;FS=9.469;HRun=0;HaplotypeScore=177.9352;InbreedingCoeff=0.2896;MQ=31.92;MQ0=34;MQRankSum=-0.052;QD=5.76;ReadPosRankSum=-0.122;VQSLOD=2.0302;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:32:17.35:37,0,17	0/0:9,0:13:4.69:0,5,100	./.	./.	0/0:24,0:33:0.27:0,0,1	./.	0/1:15,2:15:0:0,0,0	0/0:33,0:28:24.05:0,24,547	1/1:20,0:17:3.01:117,3,0	1/1:15,9:22:20.86:554,21,0	0/1:17,1:17:0:0,0,0	1/1:13,2:17:2.60:74,3,0	0/1:11,6:15:87.27:257,0,87	1/1:12,6:18:2.88:103,3,0	0/0:29,0:29:39.13:0,39,2316	1/1:9,7:16:5.97:151,6,0	0/0:8,0:6:5.05:0,5,81	1/1:6,0:5:3.01:128,3,0	1/1:16,5:17:2.92:141,3,0	./.	./.	0/0:18,1:20:2.99:0,3,132	./.	0/0:17,0:16:0:0,0,1	0/0:19,0:26:2.98:0,3,23	0/1:39,0:38:62.02:62,0,622	0/0:20,0:21:14.44:0,14,232	./.
chr10	20120551	.	G	GTCTC	820.41	PASS	AC=8;AF=0.444;AN=18;BaseQRankSum=-0.330;DP=249;FS=11.939;HRun=0;HaplotypeScore=14.1153;MQ=24.35;MQ0=83;MQRankSum=-3.045;QD=12.82;ReadPosRankSum=-3.950;VQSLOD=-0.5683;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	./.	./.	./.	1/1:15,16:23:42.42:891,42,0	./.	0/0:16,0:4:8.34:0,8,111	./.	./.	./.	./.	0/0:30,0:22:51.16:0,51,880	./.	1/1:13,0:6:2.04:6,2,0	./.	1/1:6,0:2:0.32:3,0,0	0/0:9,0:4:3.01:0,3,54	./.	0/0:6,0:3:0:0,0,0	./.	./.	./.	1/1:13,0:1:2.22:7,2,0	0/0:9,0:5:2.80:0,3,35	./.
chr10	20120645	.	CTGTG	C	5764.88	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=4.166;DP=341;FS=63.581;HRun=0;HaplotypeScore=93.2147;InbreedingCoeff=0.6472;MQ=65.76;MQ0=19;MQRankSum=-2.942;QD=19.68;ReadPosRankSum=4.635;VQSLOD=1.9811;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:19:17.55:293,18,0	1/1:2,0:2:1.25:3,1,0	0/0:15,0:13:19.97:0,20,503	0/0:16,0:11:19.10:0,19,284	1/1:6,0:6:8.71:147,9,0	1/1:13,0:12:2.81:49,3,0	1/1:17,0:16:12.93:188,13,0	1/1:23,0:19:10.67:30,11,0	1/1:17,0:16:24.36:448,24,0	1/1:15,0:14:39.13:649,39,0	1/1:9,0:9:21.07:341,21,0	1/1:14,0:14:23.46:363,23,0	1/1:8,0:8:21.07:335,21,0	1/1:16,0:16:24.08:360,24,0	0/0:17,0:15:42.14:0,42,707	1/1:20,0:19:32.70:543,33,0	1/1:17,0:14:9.03:120,9,0	1/1:10,0:10:13.10:136,13,0	1/1:1,8:8:21.01:290,21,0	1/1:0,6:6:3.01:38,3,0	1/1:10,0:8:2.94:18,3,0	1/1:9,0:9:24.08:396,24,0	1/1:2,5:6:3.01:35,3,0	1/1:16,0:13:15.05:246,15,0	1/1:11,0:10:12.51:202,13,0	1/1:3,8:8:21.07:339,21,0	1/1:4,0:4:9.03:147,9,0	1/1:3,0:1:3.01:49,3,0
chr10	20120779	.	GATGA	G	1757.35	PASS	AB=0.800;AC=47;AF=0.839;AN=56;BaseQRankSum=10.159;DP=240;FS=15.890;HRun=0;HaplotypeScore=141.7111;InbreedingCoeff=0.5893;MQ=110.58;MQ0=0;MQRankSum=-10.175;QD=11.95;ReadPosRankSum=4.493;VQSLOD=1.7002;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,5:12:16.20:156,16,0	1/1:1,3:4:12.02:123,12,0	0/0:24,0:24:72.22:0,72,1795	0/0:17,0:17:48.14:0,48,1222	1/1:5,2:7:4.75:52,5,0	1/1:0,2:2:6.02:70,6,0	1/1:5,3:8:19.03:141,19,0	0/0:27,0:27:81.26:0,81,2219	1/1:1,2:3:6.02:72,6,0	1/1:8,2:10:14.91:114,15,0	1/1:10,0:10:5.21:36,5,0	1/1:4,0:4:6.76:27,7,0	1/1:1,0:1:3:26,3,0	1/1:1,2:3:6.02:69,6,0	0/0:25,0:25:72.25:0,72,2044	1/1:3,0:3:5.67:16,6,0	1/1:2,1:3:4.19:31,4,0	1/1:3,0:3:8.46:49,8,0	1/1:4,2:6:13.53:92,14,0	1/1:5,8:13:27.88:224,28,0	1/1:4,2:6:7.52:39,8,0	1/1:6,1:7:7.10:40,7,0	1/1:14,0:14:17.04:105,17,0	0/1:3,1:4:9.74:10,0,16	1/1:9,5:14:22.99:178,23,0	1/1:1,2:3:9.02:91,9,0	1/1:3,1:4:10.05:73,10,0	1/1:0,3:3:9.02:89,9,0
chr10	20120785	.	T	TTTACTTTACCAAA	19744.86	PASS	AC=46;AF=0.852;AN=54;BaseQRankSum=9.947;DP=235;FS=1.700;HRun=0;HaplotypeScore=108.6157;InbreedingCoeff=0.7412;MQ=116.37;MQ0=0;MQRankSum=-11.960;QD=146.26;ReadPosRankSum=8.416;VQSLOD=5.0561;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,7:13:33.07:1641,33,0	1/1:0,0:3:9.03:324,9,0	0/0:23,0:23:69.22:0,69,2487	0/0:23,0:23:57.15:0,57,1913	1/1:0,4:6:18.06:1030,18,0	1/1:0,0:2:6.02:215,6,0	1/1:0,4:7:21.07:1138,21,0	0/0:27,0:27:81.28:0,81,3250	1/1:2,0:4:9.03:286,9,0	1/1:0,6:8:24.08:1437,24,0	1/1:0,8:8:24.08:1623,24,0	1/1:0,3:4:6.02:407,6,0	./.	1/1:0,1:5:6.02:215,6,0	0/0:26,0:26:72.25:0,72,2927	1/1:0,3:4:9.03:610,9,0	1/1:0,2:3:9.03:517,9,0	1/1:0,2:4:6.02:407,6,0	1/1:0,2:4:12.04:605,12,0	1/1:0,5:13:36.12:1773,36,0	1/1:0,3:6:15.05:773,15,0	1/1:0,6:7:21.07:1328,21,0	1/1:0,10:10:30.10:2028,30,0	1/1:0,2:3:3.01:165,3,0	1/1:0,8:13:39.13:2159,39,0	1/1:0,0:2:6.02:218,6,0	1/1:0,2:3:9.03:516,9,0	1/1:0,0:3:9.03:331,9,0
chr10	20120790	.	CCA	C	872.23	PASS	AB=0.780;AC=17;AF=0.304;AN=56;BaseQRankSum=4.795;DP=345;FS=0.000;HRun=0;HaplotypeScore=151.1436;InbreedingCoeff=-0.3021;MQ=98.72;MQ0=0;MQRankSum=-6.874;QD=5.35;ReadPosRankSum=2.235;VQSLOD=2.9437;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:12,5:17:99:107,0,497	0/1:3,3:6:86.90:87,0,158	0/0:22,0:22:66.22:0,66,1250	0/0:25,0:25:72.20:0,72,1379	0/1:10,2:12:29.39:29,0,452	0/1:2,2:4:61.44:61,0,110	0/1:14,3:17:52:52,0,754	0/0:26,0:26:78.27:0,78,1586	0/1:9,2:11:47.63:48,0,385	0/1:16,2:18:16.47:16,0,821	0/0:15,0:15:42.10:0,42,778	0/0:9,0:9:18.06:0,18,307	0/0:4,0:4:9.03:0,9,176	0/1:5,2:7:51.67:63,0,52	0/0:29,0:29:84.29:0,84,1684	0/0:13,0:13:28.07:0,28,576	0/1:5,1:6:12.47:12,0,244	0/0:7,0:7:7.83:0,8,128	0/1:6,2:8:37.24:37,0,301	0/1:7,8:15:99:185,0,205	0/1:14,2:16:38.12:38,0,478	0/0:12,1:13:9.85:0,10,662	0/0:13,0:13:36.12:0,36,693	0/0:5,1:6:5.61:0,6,46	0/1:11,5:16:99:120,0,610	0/1:1,2:3:51.77:59,0,52	0/1:3,1:4:24.68:25,0,170	1/1:0,3:3:9.02:95,9,0
chr10	20120924	.	T	TC	8074.02	PASS	AC=46;AF=0.852;AN=54;BaseQRankSum=14.465;DP=382;FS=52.434;HRun=1;HaplotypeScore=173.4356;InbreedingCoeff=0.9155;MQ=106.38;MQ0=0;MQRankSum=-14.347;QD=31.29;ReadPosRankSum=4.489;VQSLOD=0.1851;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,3:11:23.98:330,24,0	1/1:3,3:6:18.02:222,18,0	0/0:33,0:33:88.99:0,89,1100	0/0:29,0:29:87.22:0,87,1061	1/1:1,9:10:2.57:195,3,0	1/1:1,7:8:21.07:285,21,0	1/1:6,11:17:36.11:480,36,0	0/0:26,0:26:72.23:0,72,922	1/1:4,8:12:31.33:397,31,0	1/1:2,9:11:33.11:446,33,0	1/1:3,6:9:24.04:307,24,0	1/1:2,12:14:39.09:511,39,0	1/1:3,10:13:39.09:514,39,0	1/1:2,10:12:33.02:405,33,0	0/0:36,0:36:99:0,105,1363	1/1:3,8:11:33.11:440,33,0	1/1:2,7:9:23.93:282,24,0	1/1:5,4:9:24.05:313,24,0	1/1:3,4:7:8.89:77,9,0	1/1:2,7:9:24.08:325,24,0	1/1:6,7:13:29.37:353,29,0	1/1:6,13:19:19.48:439,19,0	1/1:5,10:15:13.54:381,14,0	1/1:6,7:13:14.84:290,15,0	1/1:3,8:11:33.11:443,33,0	1/1:4,5:9:24.07:318,24,0	1/1:4,6:10:24.08:323,24,0	./.
chr10	20120926	.	T	TCA	5503.54	PASS	AB=0.500;AC=45;AF=0.833;AN=54;BaseQRankSum=14.030;DP=314;FS=38.098;HRun=0;HaplotypeScore=140.7768;InbreedingCoeff=0.7244;MQ=116.71;MQ0=0;MQRankSum=-14.095;QD=29.27;ReadPosRankSum=6.559;VQSLOD=3.7883;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,3:3:6.02:74,6,0	1/1:0,3:3:9.03:110,9,0	0/0:32,0:32:89.39:0,89,1341	0/0:30,0:30:87.04:0,87,1302	1/1:1,9:10:0.14:163,0,0	1/1:2,7:8:23.07:261,23,0	1/1:1,11:12:24.06:281,24,0	0/0:28,0:28:78.24:0,78,1185	1/1:0,8:9:27:311,27,0	1/1:1,9:10:27.09:357,27,0	1/1:0,6:6:18.05:214,18,0	1/1:0,12:13:37.36:442,37,0	1/1:1,10:11:30.09:363,30,0	1/1:1,8:9:24.07:285,24,0	0/0:36,0:36:99:0,108,1681	1/1:0,8:8:24.07:293,24,0	1/1:1,7:8:23.10:258,23,0	1/1:0,4:5:12.93:162,13,0	1/1:0,4:4:9:91,9,0	1/1:2,6:8:21.05:244,21,0	1/1:2,7:9:15.03:166,15,0	0/1:0,13:13:9.68:284,0,10	1/1:0,10:10:4.01:264,4,0	1/1:2,7:9:18.05:211,18,0	1/1:0,8:8:24.07:289,24,0	1/1:0,5:5:15.05:196,15,0	1/1:2,4:6:17.92:183,18,0	./.
chr10	20120928	.	A	AACAT	17926.07	PASS	AC=46;AF=0.852;AN=54;BaseQRankSum=11.917;DP=403;FS=58.097;HRun=0;HaplotypeScore=156.2599;InbreedingCoeff=0.9626;MQ=103.66;MQ0=0;MQRankSum=-14.669;QD=64.48;ReadPosRankSum=2.688;VQSLOD=2.7748;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,3:7:12.51:320,13,0	1/1:0,3:3:9.03:246,9,0	0/0:32,0:32:84.25:0,84,1626	0/0:30,0:30:87.30:0,87,1745	1/1:4,9:13:16.44:595,16,0	1/1:3,7:9:30.09:736,30,0	1/1:6,11:17:29.74:750,30,0	0/0:29,0:29:77.95:0,78,1422	1/1:5,8:13:39.13:1043,39,0	1/1:3,9:12:33.11:863,33,0	1/1:3,6:9:27.09:726,27,0	1/1:4,12:16:45.15:1223,45,0	1/1:3,10:13:36.12:885,36,0	1/1:5,8:13:36.12:962,36,0	0/0:34,0:34:99:0,102,2123	1/1:4,8:12:33.11:897,33,0	1/1:9,7:16:45.15:1151,45,0	1/1:5,4:9:27.08:693,27,0	1/1:6,4:10:24.08:629,24,0	1/1:7,6:13:13.40:658,13,0	1/1:8,7:15:18.64:428,19,0	1/1:4,12:17:45.15:1129,45,0	1/1:4,10:14:39.13:944,39,0	1/1:5,7:12:24.08:613,24,0	1/1:4,8:12:36.12:943,36,0	1/1:7,5:12:33.11:880,33,0	1/1:6,4:10:27.19:613,27,0	./.
chr10	20121069	.	A	AG	13447.40	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=12.426;DP=685;FS=3.514;HRun=3;HaplotypeScore=212.1195;InbreedingCoeff=0.9816;MQ=77.19;MQ0=0;MQRankSum=-12.186;QD=23.68;ReadPosRankSum=3.285;VQSLOD=4.0790;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:34,0:34:87.09:840,87,0	1/1:6,0:6:18.03:172,18,0	0/0:26,0:26:53.97:0,54,630	0/0:22,0:22:59.33:0,59,659	1/1:19,0:19:33.04:329,33,0	1/1:20,0:20:57:514,57,0	1/1:25,0:25:65.94:576,66,0	0/0:32,0:32:87.25:0,87,1033	1/1:26,1:27:75.04:704,75,0	1/1:24,0:24:65.77:561,66,0	1/1:23,0:23:59.94:533,60,0	1/1:35,0:35:90.02:840,90,0	1/1:28,1:29:77.99:717,78,0	1/1:22,0:22:59.97:589,60,0	0/0:37,0:37:99:0,111,1306	1/1:21,0:21:56.95:499,57,0	1/1:24,1:25:68.93:598,69,0	1/1:25,0:25:74.90:638,75,0	1/1:22,0:22:53.78:429,54,0	1/1:24,1:25:65.95:579,66,0	1/1:26,0:26:68.80:553,69,0	1/1:30,0:30:71.97:648,72,0	1/1:18,0:18:54.03:507,54,0	1/1:28,0:28:74.95:660,75,0	1/1:25,0:25:63.03:588,63,0	1/1:27,0:27:71.89:632,72,0	1/1:28,1:28:68.82:658,69,0	1/1:3,0:3:9:82,9,0
chr10	20121072	.	G	GT	23676.39	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=7.036;DP=653;FS=3.455;HRun=0;HaplotypeScore=161.2659;InbreedingCoeff=0.9818;MQ=77.55;MQ0=0;MQRankSum=-11.219;QD=44.09;ReadPosRankSum=4.092;VQSLOD=4.0070;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,31:34:87.30:1368,87,0	1/1:0,7:7:18.06:286,18,0	0/0:22,0:22:57.18:0,57,768	0/0:24,0:24:63.57:0,64,793	1/1:0,17:17:36.05:540,36,0	1/1:0,21:21:57.19:908,57,0	1/1:1,23:24:66.23:1051,66,0	0/0:32,0:32:90.29:0,90,1241	1/1:1,26:27:75.26:1181,75,0	1/1:0,22:22:66.22:1036,66,0	1/1:0,22:22:60.20:950,60,0	1/1:0,31:31:90.31:1427,90,0	1/1:1,26:27:81.25:1255,81,0	1/1:2,21:23:60.10:951,60,0	0/0:38,0:38:99:0,111,1533	1/1:1,19:20:57.19:907,57,0	1/1:1,24:25:69.24:1091,69,0	1/1:0,25:25:75.26:1196,75,0	1/1:1,19:20:57.18:883,57,0	1/1:1,23:24:66.20:1025,66,0	1/1:0,24:24:69.24:1101,69,0	1/1:0,24:24:72.25:1146,72,0	1/1:0,18:18:54.18:848,54,0	1/1:0,27:28:78.21:1201,78,0	1/1:0,22:22:63.21:994,63,0	1/1:0,24:24:72.25:1146,72,0	1/1:2,23:24:69.15:1044,69,0	1/1:0,3:3:9.03:143,9,0
chr10	20122242	.	GAAAAAAAACAA	G	10476.09	PASS	AB=1.000;AC=33;AF=0.589;AN=56;BaseQRankSum=-1.412;DP=547;FS=3.859;HRun=0;HaplotypeScore=191.7510;InbreedingCoeff=0.9124;MQ=65.64;MQ0=3;MQRankSum=-3.843;QD=36.38;ReadPosRankSum=6.905;VQSLOD=4.2286;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:61.12:0,61,2397	0/0:5,0:9:14.31:0,14,931	0/0:37,0:20:36.09:0,36,855	0/1:29,0:19:1.03:1,0,802	0/0:25,0:28:47.67:0,48,2194	1/1:0,10:10:10.75:374,11,0	1/1:1,16:18:36.12:1161,36,0	0/0:26,0:27:20.57:0,21,1593	0/0:23,0:23:20.66:0,21,1642	1/1:6,13:21:48:1120,48,0	1/1:3,10:13:14.97:317,15,0	1/1:4,16:21:33.11:1062,33,0	1/1:2,14:17:30.10:940,30,0	1/1:2,16:18:27.05:804,27,0	0/0:19,0:22:42.09:0,42,2035	1/1:6,17:25:45.15:1366,45,0	1/1:0,14:14:6.02:196,6,0	1/1:2,9:11:18.06:588,18,0	1/1:13,2:16:28.17:407,28,0	1/1:2,7:10:15.05:474,15,0	1/1:9,17:27:12.02:350,12,0	1/1:1,10:11:24:628,24,0	1/1:5,13:18:14.04:393,14,0	1/1:0,9:9:9.02:294,9,0	0/0:19,0:19:33.05:0,33,1252	0/0:21,0:26:46.95:0,47,1857	0/0:16,0:21:49.79:0,50,1936	0/0:8,0:9:18.06:0,18,673
chr10	20122250	.	A	AAC	5191.49	PASS	AB=0.894;AC=16;AF=0.286;AN=56;BaseQRankSum=-9.552;DP=504;FS=10.652;HRun=0;HaplotypeScore=137.7019;InbreedingCoeff=0.5488;MQ=59.65;MQ0=3;MQRankSum=1.790;QD=22.87;ReadPosRankSum=-5.359;VQSLOD=3.2796;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:16,19:34:74.64:1106,75,0	1/1:7,2:9:18.82:384,19,0	0/0:37,0:17:42.08:0,42,400	0/1:28,0:20:8.37:8,0,168	1/1:16,13:29:34.53:924,35,0	0/0:10,0:10:9.43:0,9,41	0/0:17,0:17:33.57:0,34,151	0/1:28,7:37:99:490,0,152	0/0:20,0:20:5.04:0,5,191	0/0:16,0:16:42.40:0,42,208	0/1:10,0:10:7.38:7,0,33	0/0:17,0:17:30.78:0,31,139	0/0:15,0:15:28.08:0,28,130	0/0:16,0:17:25.35:0,25,120	0/0:16,0:16:41.97:0,42,574	0/0:19,0:19:41.65:0,42,185	0/0:14,0:14:5.60:0,6,25	0/0:9,0:9:16.79:0,17,76	0/0:11,0:11:0.89:0,1,108	0/0:8,0:8:13.99:0,14,63	0/0:18,0:18:11.32:0,11,55	0/0:10,0:10:2.95:0,3,75	0/0:13,0:13:12.45:0,12,58	0/0:9,0:9:8.39:0,8,38	1/1:11,7:17:30.86:453,31,0	1/1:19,6:25:53.13:878,53,0	0/1:15,7:23:43.71:724,0,44	1/1:9,0:10:18.02:216,18,0
chr10	20122251	.	C	CCAAA	5268.70	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=-8.470;DP=519;FS=6.543;HRun=0;HaplotypeScore=159.2131;InbreedingCoeff=0.7050;MQ=60.57;MQ0=3;MQRankSum=0.994;QD=20.99;ReadPosRankSum=-8.363;VQSLOD=1.8434;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:21,6:38:74.05:902,74,0	1/1:2,5:10:27:467,27,0	0/0:38,0:18:12.53:0,13,308	0/1:31,0:20:6.21:6,0,219	1/1:15,3:30:55.47:834,55,0	0/0:10,0:10:9.33:0,9,81	0/0:17,0:17:36.02:0,36,322	0/1:36,0:36:22.02:408,0,22	0/1:19,0:19:18.60:19,0,169	0/0:15,0:15:41.79:0,42,345	0/0:10,0:10:9.85:0,10,74	0/0:17,0:17:33.02:0,33,295	0/0:15,0:15:30.02:0,30,272	0/0:17,0:17:26.98:0,27,233	0/0:16,0:16:41.94:0,42,657	0/0:19,0:19:44.64:0,45,378	0/0:14,0:14:6:0,6,54	0/0:9,0:9:18.01:0,18,161	0/0:11,0:11:20.10:0,20,174	0/0:8,0:8:15.01:0,15,134	0/0:19,0:19:11.87:0,12,99	0/0:10,0:10:20.97:0,21,180	0/0:13,0:13:12.45:0,12,101	0/0:9,0:9:8.96:0,9,80	1/1:7,4:18:33.04:440,33,0	1/1:11,3:32:74.30:933,74,0	1/1:18,4:24:68.87:892,69,0	1/1:1,3:10:18.03:369,18,0
chr10	20122527	.	TC	T	3604.97	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=6.993;DP=633;FS=0.364;HRun=8;HaplotypeScore=75.0714;InbreedingCoeff=0.9832;MQ=84.63;MQ0=0;MQRankSum=-3.261;QD=23.56;ReadPosRankSum=2.137;VQSLOD=4.3585;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,37:43:99:1014,105,0	1/1:0,6:6:15.02:145,15,0	0/0:21,0:20:45.12:0,45,520	0/0:22,0:22:35.82:0,36,362	1/1:2,18:20:48.07:463,48,0	0/0:21,0:21:60.18:0,60,725	0/0:18,0:18:51.14:0,51,599	0/0:13,0:21:20.83:0,21,124	0/0:4,0:11:11.49:0,11,63	0/0:30,0:30:78.24:0,78,942	0/0:21,0:21:60.17:0,60,712	0/0:31,1:32:61.28:0,61,1001	0/0:31,0:31:87.27:0,87,1050	0/0:21,0:21:54.12:0,54,616	0/0:17,1:18:22.18:0,22,551	0/0:33,0:33:93.28:0,93,1114	0/0:27,0:27:78.24:0,78,942	0/0:20,0:20:57.17:0,57,682	0/0:18,0:18:48.13:0,48,562	0/0:21,0:21:63.19:0,63,760	0/0:28,0:28:84.23:0,84,991	0/0:17,0:17:48.11:0,48,553	0/0:19,0:19:57.17:0,57,683	0/0:30,0:30:72.12:0,72,838	1/1:3,19:22:54.08:521,54,0	1/1:4,15:19:11.64:371,12,0	1/1:1,32:33:84.08:801,84,0	1/1:0,10:10:30.05:289,30,0
chr10	20122885	.	A	AG	2170.82	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-10.620;DP=739;FS=0.506;HRun=2;HaplotypeScore=69.1587;InbreedingCoeff=0.9979;MQ=94.83;MQ0=0;MQRankSum=-1.878;QD=35.01;ReadPosRankSum=0.021;VQSLOD=3.8628;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,144,1732	0/0:9,0:9:27.08:0,27,335	0/0:35,0:35:61.89:0,62,1106	0/0:31,0:31:69.18:0,69,820	0/0:23,0:23:69.18:0,69,828	0/0:21,0:21:60.18:0,60,732	0/0:30,0:30:90.27:0,90,1103	1/1:4,26:30:78.23:1084,78,0	1/1:1,31:32:84.28:1208,84,0	0/0:22,0:22:63.18:0,63,751	0/0:16,0:16:48.13:0,48,582	0/0:35,0:35:90.24:0,90,1078	0/0:30,0:30:84.25:0,84,1028	0/0:20,0:20:57.15:0,57,682	0/0:31,0:31:93.29:0,93,1153	0/0:27,0:27:81.24:0,81,991	0/0:31,0:31:90.20:0,90,1059	0/0:23,0:23:69.16:0,69,824	0/0:10,0:10:24.08:0,24,298	0/0:21,0:21:57.18:0,57,706	0/0:40,0:40:99:0,111,1362	0/0:18,0:18:51.15:0,51,619	0/0:21,0:21:60.14:0,60,695	0/0:29,0:29:87.26:0,87,1064	0/0:27,0:27:66.18:0,66,793	0/0:33,0:33:87.27:0,87,1068	0/0:33,0:33:93.29:0,93,1152	0/0:9,0:9:27.08:0,27,335
chr10	20124197	.	G	GTAA	20184.05	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=-16.004;DP=714;FS=1.243;HRun=0;HaplotypeScore=93.1577;InbreedingCoeff=0.9999;MQ=89.20;MQ0=0;MQRankSum=-5.290;QD=53.97;ReadPosRankSum=3.487;VQSLOD=6.9199;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,132,2044	0/0:14,0:14:42.14:0,42,686	0/0:26,0:26:69.21:0,69,1080	0/0:31,0:31:81.23:0,81,1251	0/0:22,0:22:66.23:0,66,1075	1/1:4,25:29:78.27:1654,78,0	1/1:5,15:20:45.15:975,45,0	0/0:50,0:50:99:0,135,2067	0/0:34,0:34:99:0,99,1609	1/1:5,20:27:69.24:1482,69,0	1/1:1,10:12:30.06:623,30,0	1/1:2,23:25:54.03:1204,54,0	1/1:0,25:29:75.26:1656,75,0	1/1:2,27:31:81.28:1747,81,0	0/0:23,0:23:66.23:0,66,1076	1/1:2,26:28:78.27:1714,78,0	1/1:2,16:18:45.15:1005,45,0	1/1:2,19:22:54.19:1206,54,0	1/1:2,14:18:45.15:950,45,0	1/1:2,17:19:51.09:1014,51,0	1/1:1,33:34:93.32:2048,93,0	1/1:4,17:21:45.07:910,45,0	1/1:1,15:18:45.03:923,45,0	1/1:3,20:23:48.11:1072,48,0	0/0:18,0:18:54.18:0,54,880	0/0:33,0:33:99:0,99,1593	0/0:25,0:25:75.26:0,75,1223	0/0:17,0:17:48.16:0,48,782
chr10	20125063	.	G	GA	5651.49	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-12.799;DP=686;FS=3.844;HRun=8;HaplotypeScore=68.0908;InbreedingCoeff=0.9952;MQ=77.11;MQ0=1;MQRankSum=-1.216;QD=29.43;ReadPosRankSum=0.713;VQSLOD=5.0884;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,39:45:99:1279,111,0	1/1:0,14:14:42.12:485,42,0	0/0:21,0:22:14.57:0,15,232	0/0:20,0:18:45.28:0,45,394	1/1:4,23:27:69.21:796,69,0	0/0:22,0:22:63.02:0,63,572	0/0:14,0:14:36.01:0,36,330	0/0:28,0:28:74.98:0,75,671	0/0:4,0:30:46.85:0,47,138	0/0:24,0:24:57.02:0,57,522	0/0:14,0:14:42.02:0,42,384	0/0:16,0:16:39.01:0,39,357	0/0:26,0:26:72.01:0,72,652	0/0:31,0:31:77.05:0,77,712	0/0:35,0:35:87.03:0,87,796	0/0:24,0:24:66:0,66,595	0/0:26,0:26:75.04:0,75,687	0/0:12,0:12:33.02:0,33,302	0/0:29,0:29:81.01:0,81,733	0/0:29,0:29:75.02:0,75,681	0/0:19,0:19:57.03:0,57,522	0/0:28,0:28:63.01:0,63,572	0/0:25,0:25:62.99:0,63,568	0/0:20,0:19:37.17:0,37,474	1/1:5,31:36:90.27:1039,90,0	1/1:6,28:34:35.32:910,35,0	1/1:1,28:29:81.24:935,81,0	1/1:1,6:7:18.05:208,18,0
chr10	20126332	.	T	TCCC	3753.92	PASS	AB=0.838;AC=39;AF=0.696;AN=56;BaseQRankSum=6.745;DP=308;FS=59.490;HRun=0;HaplotypeScore=72.1316;InbreedingCoeff=0.4150;MQ=86.77;MQ0=0;MQRankSum=-6.082;QD=20.86;ReadPosRankSum=0.568;VQSLOD=1.3327;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,0:8:3.19:41,3,0	1/1:3,0:3:0.35:65,0,0	0/0:33,0:29:69.15:0,69,1281	0/0:28,0:18:29.71:0,30,457	1/1:11,0:11:6.89:61,7,0	1/1:7,8:17:9.62:237,10,0	0/1:4,5:9:0.63:287,0,1	0/0:38,0:38:99:0,108,1969	0/0:13,0:13:39.13:0,39,727	1/1:6,2:8:16.56:225,17,0	1/1:11,4:15:1.20:177,1,0	1/1:4,3:8:12.03:248,12,0	1/1:2,4:6:4.86:217,5,0	1/1:2,0:2:4.26:44,4,0	0/0:15,0:15:45.15:0,45,832	0/1:5,1:6:52.40:60,0,52	0/1:6,5:11:8.77:290,0,9	1/1:5,3:8:17.84:302,18,0	1/1:12,3:16:22.20:300,22,0	1/1:4,4:8:9.42:248,9,0	1/1:2,1:3:3.01:54,3,0	1/1:3,2:6:16.28:222,16,0	1/1:4,1:5:8.04:94,8,0	1/1:1,8:9:19.59:417,20,0	0/1:5,0:5:0.49:20,0,0	1/1:9,0:9:0.92:96,1,0	0/1:7,0:7:2.91:50,0,3	0/0:1,0:1:0.47:0,0,1
chr10	20126399	.	TTTTA	T	1030.62	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.274;DP=278;FS=5.737;HRun=0;HaplotypeScore=49.8987;InbreedingCoeff=0.4479;MQ=59.18;MQ0=0;MQRankSum=-2.272;QD=27.85;ReadPosRankSum=-4.095;VQSLOD=1.8383;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:33.07:0,33,721	0/0:5,0:5:9.03:0,9,223	0/0:6,0:6:9.03:0,9,210	0/0:2,0:2:3.01:0,3,43	0/0:13,0:13:30.10:0,30,691	0/0:22,0:22:57.19:0,57,1369	0/0:3,0:3:6.02:0,6,146	1/1:14,23:37:69.22:1125,69,0	0/0:7,0:7:18.06:0,18,441	0/0:9,0:9:21.07:0,21,496	0/0:11,0:11:21.07:0,21,474	0/0:7,0:7:9.03:0,9,204	0/0:6,0:6:15.05:0,15,361	0/0:2,0:2:6.02:0,6,149	0/0:7,0:7:12.04:0,12,298	0/0:4,0:4:12.04:0,12,298	0/0:17,0:17:33.11:0,33,817	0/0:11,0:11:30.10:0,30,644	0/0:19,0:19:36.12:0,36,861	0/0:14,0:14:24.08:0,24,585	0/0:2,0:2:6.02:0,6,149	0/0:3,0:3:3.01:0,3,74	0/0:4,0:4:6.02:0,6,149	0/0:5,0:5:10.28:0,10,214	0/0:9,0:9:21.07:0,21,521	0/0:8,0:8:18.06:0,18,444	0/0:12,0:12:30.09:0,30,654	0/0:18,0:18:45.15:0,45,1102
chr10	20127032	.	GT	G	1588.13	PASS	AB=0.918;AC=16;AF=0.286;AN=56;BaseQRankSum=-0.768;DP=404;FS=3.766;HRun=11;HaplotypeScore=60.8997;InbreedingCoeff=0.5482;MQ=67.98;MQ0=9;MQRankSum=-0.306;QD=11.18;ReadPosRankSum=1.481;VQSLOD=3.2022;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,17:21:38.78:309,39,0	1/1:2,6:8:11.97:98,12,0	0/0:29,0:11:4.45:0,4,82	0/0:36,0:10:12.66:0,13,75	1/1:6,15:21:41.92:344,42,0	0/0:6,0:6:6.02:0,6,64	0/0:6,0:6:18.04:0,18,191	0/0:28,0:29:81.04:0,81,843	0/0:5,0:5:15.03:0,15,154	0/0:19,1:20:11.74:0,12,321	0/0:24,0:24:42.11:0,42,446	0/1:10,0:10:9.58:10,0,113	0/0:6,0:6:13.65:0,14,120	0/1:9,1:10:3.58:4,0,144	0/0:9,0:9:21.05:0,21,220	0/0:13,0:13:27.29:0,27,303	0/0:15,0:15:35.94:0,36,350	0/1:14,1:15:19.29:19,0,160	0/0:16,0:15:21.72:0,22,247	0/0:15,1:16:14.35:0,14,340	0/0:6,0:5:9.02:0,9,96	0/0:2,0:2:6.02:0,6,64	0/0:15,1:16:5.67:0,6,245	0/0:5,0:5:1.30:0,1,56	0/1:11,3:14:45.13:45,0,145	1/1:0,17:17:50.75:402,51,0	1/1:1,21:22:53.94:443,54,0	1/1:0,4:4:11.99:98,12,0
chr10	20127051	.	A	ATTT	4346.56	PASS	AB=1.000;AC=34;AF=0.607;AN=56;BaseQRankSum=-4.669;DP=434;FS=3.688;HRun=14;HaplotypeScore=70.0823;InbreedingCoeff=0.7818;MQ=64.86;MQ0=13;MQRankSum=-1.719;QD=18.04;ReadPosRankSum=-0.264;VQSLOD=3.6937;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:22:32.78:0,33,322	0/0:5,0:7:20.88:0,21,189	0/0:42,0:11:1.37:0,1,171	0/1:39,0:11:7.52:8,0,50	0/0:18,0:22:41.37:0,41,370	1/1:3,0:6:2.99:23,3,0	1/1:5,2:10:25.56:287,26,0	0/0:8,0:28:43.29:0,43,260	0/0:10,0:10:23.87:0,24,236	1/1:5,15:23:51.05:712,51,0	1/1:5,11:22:50.48:594,50,0	1/1:3,2:5:10.27:133,10,0	1/1:8,1:9:15:187,15,0	1/1:5,1:9:11.98:164,12,0	0/0:9,0:9:23.98:0,24,239	1/1:1,11:13:30.08:493,30,0	1/1:2,6:11:16.28:224,16,0	1/1:5,6:14:13.89:154,14,0	1/1:6,10:17:36.50:482,36,0	1/1:6,2:17:29.99:326,30,0	1/1:4,2:4:4.26:55,4,0	1/1:0,2:2:6.02:105,6,0	1/1:4,3:11:18.02:224,18,0	1/1:2,3:5:11.99:176,12,0	0/0:17,0:17:32.62:0,33,323	0/1:16,0:17:0.86:1,0,178	0/0:23,0:23:35.60:0,36,356	0/0:9,0:10:22.58:0,23,243
chr10	20127297	.	C	CCT	763.26	PASS	AB=0.976;AC=3;AF=0.054;AN=56;BaseQRankSum=5.699;DP=569;FS=0.822;HRun=0;HaplotypeScore=76.7675;InbreedingCoeff=0.5575;MQ=70.71;MQ0=1;MQRankSum=-1.079;QD=12.31;ReadPosRankSum=1.093;VQSLOD=3.4885;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:9.96:0,10,645	0/0:8,0:8:18.06:0,18,219	0/0:39,0:23:34.33:0,34,347	0/1:38,0:29:41.89:42,0,175	0/0:23,0:23:48.12:0,48,562	0/0:20,0:20:51.16:0,51,623	0/0:28,0:28:66.21:0,66,806	0/0:21,0:21:25.05:0,25,326	1/1:2,20:22:51.17:827,51,0	0/0:32,0:32:78.20:0,78,913	0/0:25,0:25:54.16:0,54,648	0/0:15,0:16:29.92:0,30,344	0/0:15,0:15:30.08:0,30,353	0/0:13,0:13:33.10:0,33,403	0/0:18,0:18:36.11:0,36,440	0/0:14,0:14:36.11:0,36,440	0/0:21,0:21:54.15:0,54,646	0/0:17,0:17:42.13:0,42,513	0/0:13,0:13:23.87:0,24,255	0/0:15,0:15:39.12:0,39,475	0/0:20,0:20:48.15:0,48,587	0/0:17,0:17:39.12:0,39,473	0/0:18,0:18:30.09:0,30,367	0/0:22,0:23:44.97:0,45,527	0/0:15,0:15:27.08:0,27,330	0/0:22,0:22:57.15:0,57,666	0/0:25,0:25:60.15:0,60,706	0/0:2,0:3:2.84:0,3,14
chr10	20127753	.	A	AAC	4906	PASS	AB=0.690;AC=23;AF=0.411;AN=56;BaseQRankSum=-9.973;DP=684;FS=5.377;HRun=0;HaplotypeScore=109.6578;InbreedingCoeff=0.1139;MQ=65.09;MQ0=18;MQRankSum=1.894;QD=12.17;ReadPosRankSum=-0.946;VQSLOD=3.9868;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:52:40.10:0,40,194	0/0:4,0:8:11.46:0,11,60	0/0:32,0:21:3.01:0,3,33	0/0:34,0:22:3.01:0,3,31	0/0:10,0:23:14.63:0,15,71	0/1:6,5:11:16.92:81,0,17	0/1:12,5:17:24.13:81,0,24	0/0:29,0:31:3.31:0,3,15	1/1:18,0:19:14.93:165,15,0	1/1:9,6:15:15.02:195,15,0	0/1:11,14:26:25.38:339,0,25	1/1:14,11:27:23.18:320,23,0	0/1:14,4:19:36.72:80,0,37	0/1:13,10:23:70.50:197,0,70	0/0:12,0:22:31.38:0,31,160	1/1:12,18:32:3.60:486,4,0	0/1:15,10:24:98.32:378,0,98	0/1:15,13:29:30.20:415,0,30	1/1:17,7:22:14.44:262,14,0	1/1:8,17:26:44.94:594,45,0	0/1:20,22:41:3.29:353,0,3	0/1:10,8:17:14.09:281,0,14	0/1:8,10:18:59.64:274,0,60	0/1:13,19:31:47.83:402,0,48	0/0:10,0:25:34.09:0,34,168	0/0:7,0:19:22.02:0,22,106	0/0:6,0:22:36.93:0,37,182	0/0:5,0:10:11.36:0,11,56
chr10	20128888	.	G	GT	1164.32	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-6.316;DP=731;FS=5.997;HRun=1;HaplotypeScore=69.7360;InbreedingCoeff=0.9958;MQ=86.42;MQ0=0;MQRankSum=-1.623;QD=40.15;ReadPosRankSum=1.572;VQSLOD=4.3581;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:60,0:60:99:0,172,2199	0/0:12,0:12:36.12:0,36,466	0/0:19,0:19:54.06:0,54,665	0/0:30,0:29:84.27:0,84,1087	0/0:23,0:23:69.21:0,69,881	0/0:27,0:27:78.25:0,78,1013	0/0:27,0:27:78.25:0,78,1013	0/0:35,0:35:99:0,99,1241	1/1:0,29:29:84.28:1259,84,0	0/0:27,0:27:78.25:0,78,1012	0/0:17,0:17:48.16:0,48,623	0/0:18,0:18:54.18:0,54,701	0/0:15,0:15:45.15:0,45,584	0/0:30,0:30:90.28:0,90,1153	0/0:39,0:39:99:0,114,1480	0/0:25,0:24:72.23:0,72,935	0/0:30,0:30:90.27:0,90,1150	0/0:21,0:21:60.19:0,60,779	0/0:29,0:29:84.27:0,84,1089	0/0:25,0:25:69.22:0,69,895	0/0:44,0:44:99:0,129,1660	0/0:18,0:18:51.15:0,51,648	0/0:19,0:19:54.15:0,54,683	0/0:31,0:31:93.30:0,93,1208	0/0:20,0:20:57.17:0,57,726	0/0:18,0:18:54.18:0,54,701	0/0:36,0:36:99:0,105,1363	0/0:7,0:7:21.07:0,21,273
chr10	20129168	.	C	CG	621.19	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-4.974;DP=368;FS=47.089;HRun=0;HaplotypeScore=60.1099;InbreedingCoeff=0.6837;MQ=79.74;MQ0=0;MQRankSum=3.137;QD=25.88;ReadPosRankSum=0.929;VQSLOD=0.9320;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:28.63:0,29,213	0/0:5,0:5:6.88:0,7,52	0/0:14,0:14:21.60:0,22,347	0/0:15,0:15:13.34:0,13,204	0/0:8,0:8:1.36:0,1,4	0/0:13,0:13:26.87:0,27,222	0/0:25,0:25:59.74:0,60,491	1/1:2,22:24:63:716,63,0	0/0:6,0:6:14.38:0,14,93	0/0:7,0:7:17.80:0,18,132	0/0:11,0:11:21:0,21,194	0/0:10,0:10:17.85:0,18,133	0/0:17,0:17:38.55:0,39,308	0/0:16,0:16:32.93:0,33,277	0/0:17,0:17:29.95:0,30,255	0/0:18,0:18:44.82:0,45,355	0/0:20,0:20:41.18:0,41,317	0/0:9,0:9:23.87:0,24,184	0/0:21,0:21:58.15:0,58,399	0/0:17,0:17:32.83:0,33,261	0/0:13,0:13:29.60:0,30,206	0/0:11,0:11:20.85:0,21,157	0/0:9,0:9:11.91:0,12,91	0/0:14,0:14:32.95:0,33,278	0/0:16,0:16:32.86:0,33,244	0/0:7,0:7:9:0,9,82	0/0:10,0:10:18.45:0,18,130	0/0:3,0:3:7.52:0,8,47
chr10	20130811	.	T	TA	11222.07	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=4.701;DP=437;FS=22.178;HRun=7;HaplotypeScore=80.6376;InbreedingCoeff=0.8856;MQ=52.89;MQ0=8;MQRankSum=-7.392;QD=29.38;ReadPosRankSum=0.021;VQSLOD=3.1043;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:10,12:21:53.55:540,54,0	1/1:3,4:7:18.05:207,18,0	0/0:11,0:6:17.06:0,17,150	0/0:14,0:8:8.67:0,9,135	1/1:3,20:23:60.10:705,60,0	1/1:5,12:15:39.11:461,39,0	1/1:3,3:6:6.02:72,6,0	1/1:5,20:22:60.14:706,60,0	0/0:20,0:20:51.06:0,51,487	1/1:2,20:22:60.18:723,60,0	1/1:3,15:17:45.05:524,45,0	1/1:1,9:10:21.06:254,21,0	1/1:1,10:11:30.09:360,30,0	1/1:2,10:12:26.85:307,27,0	0/0:10,0:10:30.04:0,30,286	1/1:2,12:14:35.84:377,36,0	1/1:3,18:21:51.16:616,51,0	1/1:5,18:23:60.12:691,60,0	1/1:4,11:15:42.12:497,42,0	1/1:2,19:21:57.12:671,57,0	1/1:2,1:3:3.01:36,3,0	1/1:2,4:6:18.03:195,18,0	1/1:6,12:18:50.97:563,51,0	1/1:2,3:5:9.03:109,9,0	1/1:5,23:28:81.02:900,81,0	1/1:2,19:21:60.17:712,60,0	1/1:6,18:24:57.13:672,57,0	1/1:1,9:10:27.08:326,27,0
chr10	20130829	.	T	TA	11390.31	PASS	AB=0.692;AC=47;AF=0.839;AN=56;BaseQRankSum=1.790;DP=467;FS=17.631;HRun=8;HaplotypeScore=90.4961;InbreedingCoeff=0.8428;MQ=62.15;MQ0=0;MQRankSum=-8.042;QD=27.45;ReadPosRankSum=0.728;VQSLOD=3.4565;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,18:21:54.12:607,54,0	1/1:0,7:7:21.06:242,21,0	0/0:12,0:12:26.40:0,26,206	0/0:8,0:8:15:0,15,133	1/1:1,25:26:75.20:843,75,0	1/1:2,13:16:41.96:461,42,0	1/1:1,14:15:33.10:381,33,0	1/1:8,25:33:75.22:865,75,0	0/0:20,0:20:56.97:0,57,510	1/1:9,11:20:39.11:443,39,0	1/1:0,19:19:51.13:568,51,0	0/1:5,4:9:9.42:146,0,9	1/1:1,9:10:27.08:311,27,0	1/1:2,11:13:8.64:353,9,0	0/0:12,0:12:26.99:0,27,242	1/1:5,12:17:36.09:397,36,0	1/1:7,16:23:45.09:503,45,0	1/1:6,17:23:54.16:623,54,0	1/1:3,15:18:48.08:521,48,0	1/1:3,16:19:48.14:549,48,0	1/1:1,4:5:9.03:104,9,0	1/1:0,9:9:27.08:309,27,0	1/1:5,13:18:20.66:477,21,0	1/1:0,8:8:18.05:208,18,0	1/1:5,22:27:69.20:783,69,0	1/1:3,20:23:60.18:690,60,0	1/1:3,21:24:61.42:695,61,0	1/1:5,7:12:30.04:311,30,0
chr10	20134529	.	GA	G	3067.46	PASS	AB=0.704;AC=28;AF=0.500;AN=56;BaseQRankSum=-0.527;DP=606;FS=6.368;HRun=14;HaplotypeScore=105.1583;InbreedingCoeff=0.3741;MQ=74.01;MQ0=1;MQRankSum=-2.045;QD=8.18;ReadPosRankSum=4.936;VQSLOD=2.8144;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:19:22.49:0,22,128	0/0:5,0:12:20.02:0,20,114	0/1:24,2:19:15.96:16,0,73	0/1:13,0:9:14.16:14,0,18	0/0:7,0:32:59.39:0,59,353	1/1:3,9:13:19.88:129,20,0	0/1:5,11:16:44.31:135,0,44	0/0:11,0:24:39.87:0,40,228	0/0:6,0:20:32.96:0,33,207	1/1:11,20:31:47.32:325,47,0	0/1:6,15:21:17.08:187,0,17	1/1:6,11:17:1.88:157,2,0	1/1:8,17:27:42.63:278,43,0	1/1:11,9:20:3.25:162,3,0	0/0:20,1:24:20.24:0,20,313	0/1:7,13:20:61.36:146,0,61	1/1:5,16:22:29.02:207,29,0	1/1:4,12:17:25.82:170,26,0	0/1:10,14:24:17.30:180,0,17	0/1:8,12:22:33.77:192,0,34	0/1:9,8:17:28.33:99,0,28	1/1:10,13:23:17.01:260,17,0	1/1:6,13:19:10.82:219,11,0	1/1:5,21:26:56.45:390,56,0	0/0:9,1:30:29.46:0,29,240	0/0:9,0:24:36.90:0,37,224	0/0:10,0:30:46.38:0,46,293	0/0:7,0:15:17.04:0,17,86
chr10	20135191	.	CGGGG	C	9023.21	PASS	AB=0.754;AC=36;AF=0.643;AN=56;BaseQRankSum=-4.016;DP=454;FS=2.384;HRun=12;HaplotypeScore=97.2120;InbreedingCoeff=0.7994;MQ=80.85;MQ0=0;MQRankSum=-2.870;QD=26.08;ReadPosRankSum=8.490;VQSLOD=2.8850;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:19:29.88:0,30,356	0/0:5,0:6:6.02:0,6,75	0/0:26,0:24:41.46:0,41,676	0/0:17,0:16:35.59:0,36,527	0/0:8,0:14:21.01:0,21,245	1/1:6,11:17:39.10:588,39,0	1/1:5,16:21:36.01:517,36,0	0/1:7,0:14:1.95:2,0,27	1/1:4,0:11:13.85:73,14,0	1/1:9,5:14:33.07:447,33,0	1/1:6,6:12:8.98:135,9,0	1/1:3,18:21:51.16:759,51,0	1/1:2,20:22:60.13:858,60,0	1/1:4,18:22:56.98:779,57,0	0/0:7,0:7:15.50:0,16,249	1/1:3,20:22:54.11:774,54,0	1/1:7,14:24:52.33:721,52,0	1/1:3,21:23:54.14:764,54,0	1/1:2,8:10:12.18:263,12,0	1/1:2,15:17:36.07:536,36,0	1/1:5,21:26:42.37:626,42,0	1/1:5,10:15:27.08:394,27,0	1/1:5,5:10:12.01:171,12,0	1/1:6,20:26:38.78:589,39,0	0/0:6,0:6:6.01:0,6,65	0/1:13,1:16:27.37:27,0,138	0/0:6,0:8:11.93:0,12,108	0/0:3,0:3:6.02:0,6,79
chr10	20135200	.	GGGGT	G	4721.28	PASS	AB=0.871;AC=22;AF=0.393;AN=56;BaseQRankSum=6.368;DP=450;FS=4.033;HRun=0;HaplotypeScore=108.3245;InbreedingCoeff=0.1385;MQ=74.07;MQ0=0;MQRankSum=-3.974;QD=14.85;ReadPosRankSum=12.311;VQSLOD=2.5558;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:39:0,39,465	0/0:4,0:4:8.97:0,9,89	0/0:21,0:18:49.67:0,50,785	0/0:17,0:16:38.87:0,39,738	0/0:14,0:14:32.86:0,33,402	0/1:14,3:17:3.95:318,0,4	1/1:17,0:17:13.79:272,14,0	0/0:16,0:16:36.46:0,36,295	0/1:11,1:12:25.91:26,0,51	0/1:9,5:14:37.13:274,0,37	0/1:7,3:10:40.87:76,0,41	0/1:22,2:24:16.15:361,0,16	1/1:22,1:23:17.45:460,17,0	1/1:19,3:22:33.38:436,33,0	0/0:12,0:12:33.52:0,34,481	1/1:21,2:22:31.56:368,32,0	0/1:21,3:24:42.19:368,0,42	1/1:24,1:23:28.49:401,28,0	0/1:14,0:14:99:117,0,121	0/1:17,2:19:26.07:271,0,26	0/1:24,2:26:15.82:287,0,16	0/1:12,4:16:30.82:262,0,31	0/1:6,2:8:24.93:114,0,25	0/1:22,2:24:1.09:311,0,1	0/0:7,0:7:12.01:0,12,131	0/0:11,0:11:13.75:0,14,332	0/0:10,0:10:23.93:0,24,251	0/0:2,0:2:5.96:0,6,52
chr10	20135820	.	AT	A	472.14	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.147;DP=580;FS=2.333;HRun=10;HaplotypeScore=60.3117;InbreedingCoeff=0.8048;MQ=69.72;MQ0=0;MQRankSum=0.287;QD=15.23;ReadPosRankSum=-3.181;VQSLOD=3.2007;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:75.14:0,75,799	0/0:6,0:6:18.05:0,18,199	0/0:7,0:7:14.85:0,15,129	0/0:11,0:11:13.37:0,13,136	0/0:31,0:31:56.16:0,56,770	0/0:25,0:25:75.18:0,75,813	0/0:17,1:18:16.06:0,16,405	1/1:8,23:31:65.92:567,66,0	0/0:22,0:22:63.16:0,63,688	0/0:23,0:23:60.15:0,60,646	0/0:31,0:31:82.42:0,82,879	0/0:31,0:31:83.99:0,84,891	0/0:17,0:17:51.10:0,51,545	0/0:17,0:17:47.95:0,48,502	0/0:31,0:31:81.22:0,81,896	0/0:19,0:19:57.12:0,57,618	0/0:21,0:21:60.15:0,60,655	0/0:15,0:15:45.12:0,45,498	0/0:13,0:13:33.04:0,33,339	0/0:19,1:20:16.63:0,17,406	0/0:12,1:13:4.03:0,4,273	0/0:23,0:23:63.14:0,63,674	0/0:16,0:16:16.08:0,16,390	0/0:26,3:29:49.09:0,49,742	0/0:17,1:18:19.07:0,19,438	0/0:22,0:22:54.15:0,54,597	0/0:30,1:32:64.02:0,64,917	0/0:10,0:10:27.07:0,27,298
chr10	20136846	.	TC	T	333.73	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.847;DP=710;FS=1.129;HRun=2;HaplotypeScore=74.1143;InbreedingCoeff=0.9976;MQ=86.80;MQ0=0;MQRankSum=-2.455;QD=18.54;ReadPosRankSum=0.115;VQSLOD=3.6093;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,123,1811	0/0:12,0:12:36.07:0,36,492	0/0:23,0:23:69.23:0,69,1026	0/0:29,0:29:84.27:0,84,1168	0/0:30,0:30:90.28:0,90,1309	0/0:24,0:24:72.23:0,72,1059	0/0:37,0:37:99:0,102,1505	0/0:43,0:43:99:0,129,1880	1/1:1,17:18:33.11:428,33,0	0/0:24,0:24:66.19:0,66,965	0/0:15,0:15:45.15:0,45,673	0/0:24,0:24:72.23:0,72,1053	0/0:24,0:24:72.24:0,72,1077	0/0:26,0:26:75.25:0,75,1120	0/0:21,0:21:63.21:0,63,931	0/0:27,0:27:81.26:0,81,1193	0/0:39,0:39:99:0,111,1639	0/0:22,0:22:63.19:0,63,916	0/0:15,0:15:45.15:0,45,674	0/0:27,0:27:75.25:0,75,1121	0/0:47,0:46:99:0,141,2048	0/0:16,0:16:48.16:0,48,719	0/0:21,0:21:63.20:0,63,924	0/0:26,0:26:78.26:0,78,1169	0/0:21,0:21:63.20:0,63,923	0/0:32,0:32:96.32:0,96,1421	0/0:16,0:16:48.16:0,48,716	0/0:8,0:8:24.08:0,24,355
chr10	20137859	.	TAC	T	113.95	PASS	AB=0.925;AC=7;AF=0.125;AN=56;BaseQRankSum=7.543;DP=776;FS=6.219;HRun=0;HaplotypeScore=118.8869;InbreedingCoeff=0.1262;MQ=67.36;MQ0=9;MQRankSum=-0.480;QD=0.66;ReadPosRankSum=-1.593;VQSLOD=1.0392;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:33,2:35:5.31:5,0,873	0/0:11,0:10:12.04:0,12,191	0/0:39,1:13:9.01:0,9,119	0/0:34,0:20:1.01:0,1,125	0/0:22,1:23:15.38:0,15,673	0/0:24,0:24:51.17:0,51,807	0/0:34,2:36:8.02:0,8,1066	1/1:19,0:35:31.25:154,31,0	0/0:19,0:33:38.47:0,38,360	0/0:38,1:39:7.81:0,8,977	0/0:14,0:14:33.11:0,33,519	0/1:24,2:26:5.73:6,0,836	0/0:32,2:34:5.31:0,5,1023	0/0:26,2:28:18.37:0,18,731	0/1:21,2:23:35.31:35,0,548	0/0:33,0:33:64.28:0,64,994	0/0:29,1:30:33.43:0,33,953	0/0:19,1:20:9.41:0,9,623	0/0:21,0:21:45.15:0,45,704	0/0:25,0:25:44.99:0,45,709	0/0:39,5:45:18.64:0,19,1213	0/1:23,2:26:23.81:24,0,595	0/0:23,1:24:12.38:0,12,645	0/0:33,0:33:62.97:0,63,962	0/0:27,0:27:51.17:0,51,799	0/1:24,3:27:17.24:17,0,704	0/0:16,1:17:9.39:0,9,622	0/0:13,0:13:33.11:0,33,515
chr10	20137901	.	ATGTGTGTGTGTG	A	2506.75	PASS	AB=0.890;AC=28;AF=0.583;AN=48;BaseQRankSum=5.116;DP=655;FS=57.648;HRun=0;HaplotypeScore=222.5151;InbreedingCoeff=0.4790;MQ=51.26;MQ0=17;MQRankSum=-6.004;QD=6.14;ReadPosRankSum=-1.793;VQSLOD=0.4614;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:30.10:0,30,672	0/0:6,0:7:6.02:0,6,148	./.	./.	0/0:17,0:17:12.04:0,12,363	0/1:16,3:20:14.94:177,0,15	0/1:29,8:38:17.71:300,0,18	./.	0/0:34,0:35:38.25:0,38,1853	1/1:26,0:28:6.32:140,6,0	1/1:16,2:18:3.01:34,3,0	1/1:22,1:23:3.01:102,3,0	1/1:21,5:28:21.07:606,21,0	1/1:26,4:31:6.01:133,6,0	0/0:19,0:20:17.99:0,18,678	1/1:22,5:27:14.76:448,15,0	0/1:29,1:29:0.18:98,0,0	0/1:18,0:18:28.63:29,0,94	1/1:20,0:21:4.95:134,5,0	1/1:19,5:24:5.92:73,6,0	1/1:31,0:29:4.71:30,5,0	1/1:21,4:23:6:79,6,0	1/1:16,0:16:2.99:24,3,0	1/1:21,6:28:9.44:271,9,0	0/0:19,0:22:30.10:0,30,771	0/0:21,0:24:22.30:0,22,522	0/0:14,0:15:18.06:0,18,377	./.
chr10	20140239	.	TA	T	3713.68	PASS	AB=0.515;AC=31;AF=0.554;AN=56;BaseQRankSum=15.162;DP=484;FS=4.270;HRun=1;HaplotypeScore=155.9121;InbreedingCoeff=0.7250;MQ=86.19;MQ0=0;MQRankSum=-15.541;QD=15.28;ReadPosRankSum=7.123;VQSLOD=3.7632;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,138,2130	0/0:5,0:5:12.04:0,12,190	0/0:17,0:17:49.41:0,49,753	0/0:27,0:27:67.77:0,68,1031	0/0:18,0:18:54.15:0,54,811	1/1:0,15:14:17.56:243,18,0	1/1:0,12:12:35.80:263,36,0	1/1:6,6:11:23.04:195,23,0	0/0:35,0:35:99:0,105,1649	1/1:3,19:22:56.44:414,56,0	0/1:0,12:12:19.19:119,0,19	1/1:3,12:15:14.17:193,14,0	1/1:2,17:19:1.52:248,2,0	1/1:1,18:19:21.26:300,21,0	0/0:18,0:18:51.17:0,51,815	1/1:2,16:16:44.18:325,44,0	1/1:1,16:17:33.98:318,34,0	1/1:0,9:9:16.22:184,16,0	1/1:3,15:18:44.20:362,44,0	1/1:1,9:10:14.94:168,15,0	1/1:5,5:10:2.34:61,2,0	0/1:1,9:10:5.90:102,0,6	0/1:1,14:15:11.57:137,0,12	1/1:2,8:10:8.06:81,8,0	0/0:14,0:14:42.14:0,42,668	0/0:30,0:30:87.24:0,87,1282	0/0:22,0:22:66.23:0,66,1053	0/0:7,0:7:21.07:0,21,334
chr10	20140241	.	TCCAAGCCTGG	T	16050.99	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=17.594;DP=461;FS=6.264;HRun=0;HaplotypeScore=191.2815;InbreedingCoeff=0.9909;MQ=85.92;MQ0=0;MQRankSum=-17.121;QD=70.09;ReadPosRankSum=3.464;VQSLOD=4.2966;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,135,6876	0/0:6,0:6:18.06:0,18,959	0/0:16,0:16:47.90:0,48,2113	0/0:26,0:26:69.24:0,69,3187	0/0:16,0:16:48.16:0,48,2499	1/1:0,15:14:42.14:1094,42,0	1/1:0,12:12:36.12:1019,36,0	1/1:2,6:7:20.59:453,21,0	0/0:33,0:33:99:0,99,5304	1/1:3,19:22:60.20:1647,60,0	1/1:0,12:12:36.12:788,36,0	1/1:2,12:14:39.13:991,39,0	1/1:1,17:18:53.77:1237,54,0	1/1:1,18:19:57.19:1438,57,0	0/0:18,0:18:51.18:0,51,2804	1/1:2,16:16:48.14:1280,48,0	1/1:0,16:16:48.16:1274,48,0	1/1:0,9:9:27.09:736,27,0	1/1:1,15:16:44.59:1210,45,0	1/1:1,9:10:30.10:789,30,0	1/1:2,5:7:12.04:271,12,0	1/1:1,9:10:27.09:620,27,0	1/1:1,14:15:36.12:807,36,0	1/1:0,8:8:15.94:397,16,0	0/0:14,0:14:42.14:0,42,2207	0/0:27,0:27:78.27:0,78,4168	0/0:23,0:23:69.24:0,69,3721	0/0:7,0:7:21.06:0,21,929
chr10	20140249	.	TG	T	1567.22	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=16.902;DP=450;FS=3.345;HRun=2;HaplotypeScore=157.4168;InbreedingCoeff=0.9724;MQ=80.26;MQ0=0;MQRankSum=-16.250;QD=6.90;ReadPosRankSum=3.953;VQSLOD=1.2033;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,132,1914	0/0:6,0:6:18.06:0,18,270	0/0:13,0:13:36.12:0,36,527	0/0:24,0:24:65.39:0,65,870	0/0:15,0:15:45.15:0,45,673	1/1:15,0:14:29.82:107,30,0	1/1:12,2:14:32.92:129,33,0	1/1:7,0:6:15.48:75,15,0	0/0:35,0:35:99:0,99,1469	1/1:21,0:22:49.72:204,50,0	1/1:12,0:12:17.47:63,17,0	1/1:12,0:12:22.46:81,22,0	1/1:17,1:18:32.94:132,33,0	1/1:18,2:20:43.42:184,43,0	0/0:20,0:20:57.19:0,57,853	1/1:16,0:14:34.93:125,35,0	1/1:17,0:17:40.94:185,41,0	1/1:9,1:10:22.95:96,23,0	1/1:15,0:15:34.66:126,35,0	1/1:9,1:10:19.71:71,20,0	1/1:6,0:6:8:50,8,0	1/1:10,0:10:12.48:45,12,0	1/1:14,0:14:17.65:65,18,0	1/1:9,0:9:12.96:57,13,0	0/0:13,0:13:39.13:0,39,582	0/0:25,0:25:75.24:0,75,1105	0/0:22,0:22:66.22:0,66,989	0/0:5,0:5:15.05:0,15,225
chr10	20140438	.	GA	G	2980.80	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=15.327;DP=579;FS=21.570;HRun=11;HaplotypeScore=98.2221;InbreedingCoeff=0.9645;MQ=54.25;MQ0=13;MQRankSum=-3.286;QD=10.28;ReadPosRankSum=2.421;VQSLOD=1.1913;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:44:99:0,110,1107	0/0:7,0:7:18.02:0,18,181	0/0:28,0:3:5.80:0,6,33	0/0:18,0:9:8.81:0,9,62	0/0:32,0:31:42.18:0,42,581	1/1:17,1:17:19.83:135,20,0	1/1:11,5:15:33.84:221,34,0	0/0:30,0:28:38.53:0,39,569	0/0:17,0:17:40.45:0,40,441	1/1:18,4:22:45.43:295,45,0	1/1:17,2:18:23.93:131,24,0	1/1:14,1:14:29.78:155,30,0	1/1:12,4:15:27.74:163,28,0	1/1:10,5:15:34.37:218,34,0	0/0:22,0:22:59.85:0,60,600	1/1:11,2:10:14.66:82,15,0	1/1:23,3:26:48.94:292,49,0	1/1:19,3:20:32.44:234,32,0	1/1:8,9:15:36.24:268,36,0	1/1:18,6:24:48.39:344,48,0	1/1:14,0:14:28.50:172,28,0	1/1:12,3:14:29.54:203,30,0	1/1:17,0:17:11.65:132,12,0	1/1:20,1:21:30.01:164,30,0	0/0:23,0:23:37.40:0,37,550	0/0:27,0:26:74.32:0,74,731	0/0:25,0:24:57.01:0,57,568	0/0:13,0:11:15.88:0,16,215
chr10	20140448	.	AAG	A	4322.35	PASS	AB=1.000;AC=31;AF=0.554;AN=56;BaseQRankSum=14.126;DP=589;FS=32.189;HRun=0;HaplotypeScore=105.6147;InbreedingCoeff=0.8586;MQ=57.96;MQ0=9;MQRankSum=-2.681;QD=14.22;ReadPosRankSum=3.632;VQSLOD=3.0200;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:44:99:0,101,1588	0/0:8,0:8:23.98:0,24,260	0/0:26,0:4:1.98:0,2,36	0/0:20,0:10:10.40:0,10,96	0/0:28,0:27:7.08:0,7,702	1/1:18,0:18:24.05:178,24,0	1/1:16,0:15:21.93:269,22,0	0/0:28,0:28:63.07:0,63,800	0/0:18,0:18:38.47:0,38,552	1/1:24,0:24:37.10:380,37,0	1/1:20,0:19:30.32:221,30,0	1/1:18,0:17:26.81:212,27,0	1/1:14,3:16:16.08:305,16,0	1/1:14,1:15:35.28:364,35,0	0/0:24,0:24:61.52:0,62,702	1/1:12,0:9:3.67:84,4,0	1/1:29,1:30:42.96:381,43,0	1/1:22,0:20:12.70:230,13,0	1/1:19,1:18:39.90:331,40,0	1/1:24,0:24:48.28:442,48,0	1/1:13,0:13:27.69:210,28,0	1/1:17,0:16:28.64:286,29,0	0/1:17,0:17:9.57:180,0,10	1/1:21,0:21:30.53:247,31,0	0/0:24,0:24:68.73:0,69,804	0/0:28,0:28:79.86:0,80,1006	0/0:26,0:25:72.14:0,72,875	0/0:10,0:9:17.54:0,18,310
chr10	20140450	.	GA	G	5005.31	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=14.897;DP=582;FS=17.692;HRun=11;HaplotypeScore=93.7903;InbreedingCoeff=0.9731;MQ=59.12;MQ0=9;MQRankSum=-4.188;QD=16.63;ReadPosRankSum=2.732;VQSLOD=4.1565;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:44:99:0,120,1361	0/0:7,0:7:21.06:0,21,241	0/0:26,0:4:5.50:0,6,44	0/0:21,0:11:11.70:0,12,105	0/0:27,0:26:59.73:0,60,640	1/1:1,17:18:32.71:300,33,0	1/1:5,11:15:35.96:316,36,0	0/0:27,0:27:63.65:0,64,721	0/0:18,0:18:42.11:0,42,470	1/1:2,21:23:57.02:514,57,0	1/1:2,19:20:44.43:387,44,0	1/1:6,12:17:20.62:166,21,0	1/1:6,11:16:29.88:248,30,0	1/1:2,13:15:32.63:270,33,0	0/0:22,0:22:47.87:0,48,523	1/1:4,9:10:12:109,12,0	1/1:5,24:29:44.99:406,45,0	1/1:8,13:19:33.01:299,33,0	1/1:1,19:18:47.97:433,48,0	1/1:2,21:23:53.86:460,54,0	1/1:2,11:13:26.91:233,27,0	1/1:2,15:17:38.98:341,39,0	1/1:3,14:17:26.69:227,27,0	1/1:0,20:20:33.01:297,33,0	0/0:24,0:24:57.14:0,57,637	0/0:27,0:27:72.20:0,72,820	0/0:27,0:26:66.18:0,66,752	0/0:10,0:9:27.08:0,27,306
chr10	20142586	.	A	ATGG	41942.52	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-10.325;DP=742;FS=2.029;HRun=0;HaplotypeScore=93.8715;InbreedingCoeff=0.9990;MQ=84.71;MQ0=0;MQRankSum=-10.339;QD=63.74;ReadPosRankSum=6.102;VQSLOD=6.1608;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,33:38:99:2408,102,0	1/1:1,14:17:42.14:1012,42,0	0/0:32,0:32:93.16:0,93,1601	0/0:20,0:20:54.10:0,54,963	1/1:0,21:21:57.20:1398,57,0	1/1:0,17:19:48.16:1125,48,0	1/1:2,25:28:78.27:1919,78,0	1/1:7,18:26:69.24:1643,69,0	1/1:2,24:28:78.22:1867,78,0	1/1:2,25:27:81.28:1979,81,0	1/1:1,13:15:39.13:956,39,0	1/1:1,31:33:87.30:2140,87,0	1/1:2,22:25:66.23:1601,66,0	1/1:4,32:36:90.74:2152,91,0	0/0:32,0:32:96.32:0,96,1753	1/1:2,35:37:99:2601,108,0	1/1:2,36:40:98.90:2437,99,0	1/1:0,28:28:84.29:2070,84,0	1/1:3,12:18:54.18:1238,54,0	1/1:1,19:21:48.16:1146,48,0	1/1:6,41:49:99:2945,120,0	1/1:3,23:26:60.20:1425,60,0	1/1:0,12:12:30.10:739,30,0	1/1:1,40:41:96.30:2367,96,0	1/1:1,12:13:39.13:952,39,0	1/1:1,21:22:66.23:1611,66,0	1/1:2,25:29:69.19:1621,69,0	1/1:0,8:9:24.08:591,24,0
chr10	20143054	.	T	TAAC	22193.39	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=13.507;DP=625;FS=3.570;HRun=0;HaplotypeScore=113.2074;InbreedingCoeff=0.9949;MQ=77.33;MQ0=0;MQRankSum=-5.626;QD=59.98;ReadPosRankSum=1.473;VQSLOD=6.6427;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,117,2019	0/0:8,0:8:21.07:0,21,370	0/0:24,0:24:47.10:0,47,844	0/0:20,0:21:49.41:0,49,796	0/0:24,0:24:66.23:0,66,1164	1/1:2,18:20:57.13:1275,57,0	1/1:5,13:22:45.15:1061,45,0	1/1:11,17:30:81.26:1812,81,0	0/0:19,0:19:57.18:0,57,976	1/1:2,26:29:84.27:1885,84,0	1/1:1,10:11:30.10:708,30,0	1/1:5,18:24:60.21:1387,60,0	1/1:4,19:23:54.19:1271,54,0	1/1:3,21:24:66.23:1540,66,0	0/0:41,0:41:99:0,120,2020	1/1:0,22:23:63.22:1469,63,0	1/1:2,21:23:63.22:1480,63,0	1/1:2,10:13:36.12:816,36,0	1/1:9,19:30:78.25:1745,78,0	1/1:0,20:20:60.21:1416,60,0	1/1:4,11:17:33.03:725,33,0	1/1:1,18:20:54.19:1275,54,0	1/1:0,18:18:51.18:1201,51,0	1/1:3,20:23:48.64:1127,49,0	0/0:14,0:14:42.14:0,42,741	0/0:25,0:25:72.23:0,72,1218	0/0:36,0:36:99:0,105,1840	0/0:4,0:4:12.02:0,12,183
chr10	20144727	.	CTG	C	896.57	PASS	AB=0.905;AC=7;AF=0.125;AN=56;BaseQRankSum=2.572;DP=887;FS=1.397;HRun=0;HaplotypeScore=196.7512;InbreedingCoeff=0.3114;MQ=67.71;MQ0=23;MQRankSum=3.550;QD=7.17;ReadPosRankSum=1.161;VQSLOD=3.0687;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:52,1:53:70.65:0,71,1506	0/0:8,0:9:3.52:0,4,168	0/0:79,1:40:12.04:0,12,168	0/0:87,1:33:14.61:0,15,146	0/1:17,1:18:4.47:4,0,353	0/0:23,0:23:5.70:0,6,49	0/0:34,0:34:15.45:0,15,115	0/1:27,3:30:84.93:85,0,164	1/1:14,27:41:81.06:911,81,0	0/0:38,0:38:57.50:0,58,542	0/0:14,0:14:6:0,6,54	0/0:24,0:25:15.39:0,15,114	0/0:28,0:28:27.25:0,27,235	0/0:27,0:27:22.04:0,22,172	0/0:45,0:46:99:0,105,1562	0/0:33,0:32:23:0,23,172	0/0:23,0:22:16.69:0,17,106	0/0:27,0:24:33.21:0,33,339	0/0:16,0:15:8.13:0,8,57	0/0:22,0:22:7.81:0,8,97	0/0:49,0:46:17.01:0,17,129	0/0:24,0:24:11.35:0,11,102	1/1:23,0:23:2.36:8,2,0	0/0:28,0:26:5.01:0,5,67	0/0:21,0:22:23.62:0,24,393	0/0:25,0:25:6.78:0,7,373	0/0:26,0:27:51.16:0,51,751	0/1:10,2:12:7.43:7,0,295
chr10	20145813	.	A	AG	8279.95	PASS	AB=0.929;AC=33;AF=0.589;AN=56;BaseQRankSum=-11.336;DP=492;FS=12.033;HRun=5;HaplotypeScore=51.2966;InbreedingCoeff=0.9445;MQ=80.18;MQ0=0;MQRankSum=-2.332;QD=27.42;ReadPosRankSum=1.912;VQSLOD=3.8924;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:84.20:0,84,892	0/0:8,0:8:24.06:0,24,258	0/0:24,0:23:48.33:0,48,599	0/0:20,0:18:26.26:0,26,326	0/0:13,0:13:39.10:0,39,418	1/1:2,16:18:42.14:552,42,0	1/1:1,27:28:60.20:790,60,0	0/0:20,0:20:42.10:0,42,450	0/0:16,0:16:42.10:0,42,449	1/1:1,17:18:42.13:538,42,0	1/1:1,7:9:18.06:236,18,0	1/1:2,10:12:23.91:290,24,0	1/1:1,11:12:24.08:316,24,0	1/1:2,26:28:56.87:749,57,0	0/0:16,0:16:48.12:0,48,516	1/1:1,17:18:39.13:513,39,0	1/1:2,27:29:69.22:908,69,0	1/1:0,20:20:57.19:750,57,0	1/1:4,12:16:36.12:470,36,0	1/1:1,8:9:18.06:237,18,0	1/1:3,29:31:72.23:947,72,0	1/1:1,13:13:24.08:315,24,0	1/1:1,9:10:18.06:237,18,0	1/1:0,16:16:33.11:429,33,0	0/0:13,0:13:39.07:0,39,408	0/1:12,1:13:3.32:3,0,318	0/0:22,0:22:57.14:0,57,613	0/0:7,0:7:21.05:0,21,226
chr10	20146127	.	CGAGTGT	C	9061.76	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=9.784;DP=720;FS=9.495;HRun=0;HaplotypeScore=151.1321;InbreedingCoeff=0.9843;MQ=67.61;MQ0=15;MQRankSum=-9.200;QD=23.06;ReadPosRankSum=1.933;VQSLOD=3.8613;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,133,3147	0/0:9,0:9:27.02:0,27,559	0/0:36,0:17:31.94:0,32,318	0/0:32,0:12:17.06:0,17,300	0/0:19,0:19:54.12:0,54,1367	1/1:1,15:18:17.84:333,18,0	1/1:0,33:35:29.46:562,29,0	0/0:34,0:34:89.31:0,89,1290	0/0:21,0:21:30.03:0,30,517	1/1:0,0:22:61.20:448,61,0	1/1:0,0:14:19.92:99,20,0	1/1:0,41:43:51.17:1107,51,0	1/1:0,31:33:53.89:1155,54,0	1/1:0,19:20:27.05:569,27,0	0/0:25,0:25:60.60:0,61,1600	1/1:0,24:25:54.19:1271,54,0	1/1:1,19:20:16.30:354,16,0	1/1:0,22:22:15.05:364,15,0	1/1:2,17:19:50.66:499,51,0	1/1:0,18:18:18.06:366,18,0	1/1:34,1:33:76.61:663,77,0	1/1:0,25:25:27.53:537,28,0	1/1:0,17:17:21.06:443,21,0	1/1:0,26:26:12.51:292,13,0	0/0:20,0:20:54.10:0,54,1370	0/0:31,0:30:33.24:0,33,1357	0/0:42,0:42:99:0,117,2776	0/0:7,0:5:14.92:0,15,115
chr10	20146129	.	AGT	A	1333.57	PASS	AB=0.960;AC=35;AF=0.648;AN=54;BaseQRankSum=9.279;DP=735;FS=0.987;HRun=0;HaplotypeScore=143.3138;InbreedingCoeff=0.3279;MQ=65.72;MQ0=15;MQRankSum=-6.545;QD=2.39;ReadPosRankSum=4.162;VQSLOD=2.4876;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:52,3:55:29.74:30,0,818	0/0:9,0:9:12.03:0,12,161	./.	0/0:33,0:11:3.01:0,3,45	0/0:20,0:20:2.81:0,3,422	1/1:18,0:18:14.14:69,14,0	1/1:35,0:35:13.83:70,14,0	0/1:32,0:33:18.02:18,0,165	0/0:29,0:31:23.73:0,24,225	1/1:22,0:22:31.04:150,31,0	1/1:14,0:14:19.89:98,20,0	1/1:43,0:43:18.58:139,19,0	1/1:33,0:33:41.48:193,41,0	1/1:20,0:20:4.08:45,4,0	0/1:20,4:25:18.41:18,0,516	1/1:25,0:25:49.89:235,50,0	1/1:21,0:20:12.61:59,13,0	1/1:22,0:22:14.20:70,14,0	1/1:19,0:19:5.68:28,6,0	1/1:18,0:18:9.92:41,10,0	1/1:35,0:33:4.64:19,5,0	0/1:25,0:25:17.82:36,0,18	0/1:17,0:17:3.54:46,0,4	1/1:27,0:27:11.36:56,11,0	0/1:20,0:20:0.11:0,0,420	0/1:28,2:29:87.12:87,0,296	0/0:39,2:41:33.56:0,34,860	0/0:9,0:7:2.98:0,3,21
chr10	20146497	.	CT	C	695.06	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.543;DP=665;FS=2.907;HRun=1;HaplotypeScore=71.2742;InbreedingCoeff=0.9937;MQ=88.87;MQ0=0;MQRankSum=-1.839;QD=30.22;ReadPosRankSum=0.388;VQSLOD=3.3670;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,114,1809	0/0:7,0:7:21.07:0,21,333	0/0:21,0:21:48.18:0,48,873	0/0:28,0:28:78.25:0,78,1193	1/1:5,18:23:58.44:790,58,0	0/0:33,0:33:99:0,99,1565	0/0:24,0:24:72.22:0,72,1126	0/0:25,0:25:72.23:0,72,1108	0/0:20,0:20:60.20:0,60,956	0/0:25,0:25:75.22:0,75,1137	0/0:12,0:12:33.09:0,33,473	0/0:33,0:33:99:0,99,1554	0/0:27,0:27:81.26:0,81,1271	0/0:19,0:19:57.19:0,57,907	0/0:28,0:28:81.26:0,81,1268	0/0:16,0:16:48.16:0,48,767	0/0:30,0:30:90.27:0,90,1390	0/0:18,0:18:54.18:0,54,860	0/0:16,0:16:48.15:0,48,721	0/0:25,0:25:72.70:0,73,1129	0/0:44,0:44:99:0,129,2006	0/0:20,0:20:54.17:0,54,836	0/0:20,0:20:60.19:0,60,930	0/0:28,0:28:84.21:0,84,1266	0/0:22,0:22:63.21:0,63,1005	0/0:30,0:30:90.27:0,90,1392	0/0:20,0:20:60.20:0,60,948	0/0:8,0:8:24.08:0,24,374
chr10	20147331	.	TACACACACAC	T	13432.97	PASS	AB=0.828;AC=44;AF=0.786;AN=56;BaseQRankSum=9.347;DP=578;FS=8.527;HRun=0;HaplotypeScore=222.7990;InbreedingCoeff=0.6849;MQ=58.58;MQ0=6;MQRankSum=-6.568;QD=29.59;ReadPosRankSum=4.349;VQSLOD=3.0933;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:24:12.19:227,12,0	1/1:5,0:9:11.97:228,12,0	0/0:19,0:11:6.02:0,6,93	0/0:33,0:23:15.05:0,15,366	1/1:10,0:28:24.08:558,24,0	1/1:4,13:18:36.12:1046,36,0	1/1:9,6:16:18.06:501,18,0	0/0:31,0:30:51.16:0,51,1297	0/0:10,0:16:15.05:0,15,524	1/1:9,17:30:60.18:1455,60,0	1/1:5,6:14:24.08:639,24,0	1/1:11,13:24:27.09:775,27,0	1/1:7,9:16:23.98:721,24,0	1/1:7,13:20:27.09:795,27,0	0/0:25,0:25:48.16:0,48,2052	1/1:5,15:21:39.13:1144,39,0	1/1:11,7:18:15.05:451,15,0	1/1:10,0:10:3:36,3,0	0/1:13,3:16:7.67:225,0,8	1/1:14,17:31:33.11:942,33,0	1/1:21,1:23:6.02:160,6,0	1/1:4,13:17:27.09:785,27,0	1/1:12,10:23:14.42:375,14,0	0/1:17,5:22:81.09:81,0,85	1/1:12,0:20:27.09:628,27,0	1/1:16,0:31:33.11:753,33,0	1/1:9,0:20:33.11:768,33,0	1/1:0,0:3:6.02:140,6,0
chr10	20147537	.	C	CA	32624.48	PASS	AC=46;AF=0.852;AN=54;BaseQRankSum=0.582;DP=881;FS=5.398;HRun=1;HaplotypeScore=103.6550;InbreedingCoeff=0.9851;MQ=85.63;MQ0=0;MQRankSum=-8.451;QD=43.73;ReadPosRankSum=3.361;VQSLOD=4.3475;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,44:45:99:2063,129,0	1/1:1,12:13:36.12:575,36,0	0/0:29,0:29:78.09:0,78,1004	0/0:27,0:27:81.27:0,81,1128	1/1:1,19:20:57.19:911,57,0	1/1:0,24:24:57.19:911,57,0	1/1:0,18:18:45.15:719,45,0	1/1:5,36:41:99:1813,114,0	0/0:39,0:39:99:0,108,1492	1/1:0,29:29:84.26:1319,84,0	1/1:0,30:30:84.29:1343,84,0	1/1:0,40:40:99:1628,102,0	1/1:0,46:46:99:2014,126,0	1/1:1,40:41:99:1678,105,0	0/0:39,0:39:99:0,114,1593	1/1:2,31:33:9.45:1306,9,0	1/1:0,30:30:84.29:1343,84,0	1/1:0,20:20:57.19:911,57,0	1/1:1,25:26:78.25:1219,78,0	1/1:1,41:42:99:1871,117,0	1/1:1,35:36:99:1631,102,0	1/1:0,26:26:75.26:1199,75,0	1/1:0,34:34:99:1583,99,0	1/1:0,42:42:99:1823,114,0	1/1:0,39:39:99:1679,105,0	1/1:1,42:43:99:1987,126,0	1/1:2,26:28:69.24:1099,69,0	./.
chr10	20150034	.	CTGG	C	6946.92	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-3.428;DP=685;FS=0.000;HRun=0;HaplotypeScore=129.1967;InbreedingCoeff=0.9993;MQ=91.70;MQ0=0;MQRankSum=-4.055;QD=42.36;ReadPosRankSum=3.546;VQSLOD=6.4046;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,36:36:99:1614,100,0	1/1:0,9:9:24.08:392,24,0	0/0:28,0:28:75.73:0,76,1590	0/0:29,0:29:81.28:0,81,1662	1/1:2,28:30:72.25:1173,72,0	0/0:23,0:23:66.23:0,66,1401	0/0:31,0:31:87.30:0,87,1923	0/0:29,0:29:78.27:0,78,1705	0/0:19,0:19:57.20:0,57,1273	0/0:29,0:29:84.28:0,84,1821	0/0:25,0:25:69.24:0,69,1502	0/0:26,0:26:75.26:0,75,1674	0/0:27,0:27:78.27:0,78,1739	0/0:26,0:26:69.24:0,69,1508	0/0:24,0:24:66.23:0,66,1458	0/0:23,0:23:66.23:0,66,1472	0/0:20,0:20:60.21:0,60,1324	0/0:17,0:17:48.16:0,48,1072	0/0:19,0:19:48.16:0,48,1058	0/0:21,0:21:57.20:0,57,1234	0/0:36,0:36:96.32:0,96,2091	0/0:20,0:20:54.17:0,54,1164	0/0:17,0:17:51.18:0,51,1119	0/0:32,0:32:93.32:0,93,2075	1/1:2,16:18:45.15:735,45,0	1/1:4,17:21:51.17:832,51,0	1/1:2,39:41:99:1810,111,0	1/1:0,9:9:24.08:391,24,0
chr10	20150348	.	G	GA	4834.18	PASS	AB=1.000;AC=35;AF=0.625;AN=56;BaseQRankSum=12.475;DP=663;FS=6.917;HRun=2;HaplotypeScore=109.3461;InbreedingCoeff=0.9056;MQ=67.19;MQ0=33;MQRankSum=-1.745;QD=13.50;ReadPosRankSum=2.787;VQSLOD=4.0379;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:40:94.56:0,95,1171	0/0:11,0:11:30.09:0,30,371	0/0:64,0:23:48.78:0,49,481	0/0:70,0:27:36.42:0,36,436	0/0:28,0:28:81.25:0,81,1004	1/1:24,3:25:47.73:367,48,0	1/1:22,3:21:29.86:234,30,0	1/1:26,0:25:62.72:657,63,0	0/0:13,1:14:39.12:0,39,484	1/1:27,1:27:68.37:602,68,0	1/1:20,0:19:41.63:293,42,0	1/1:17,1:17:32.82:244,33,0	1/1:15,0:15:20.86:151,21,0	1/1:21,0:21:38.68:275,39,0	0/0:21,0:21:63.18:0,63,762	1/1:11,1:11:20.88:151,21,0	1/1:26,1:29:44.77:341,45,0	1/1:6,1:6:17.88:129,18,0	1/1:17,0:17:44.51:410,45,0	1/1:21,0:20:38.74:279,39,0	1/1:7,1:7:5.97:43,6,0	1/1:13,0:12:23.11:171,23,0	1/1:16,1:16:26.83:194,27,0	1/1:29,0:27:32.81:238,33,0	0/0:22,0:22:66.21:0,66,818	0/1:23,0:23:53.47:53,0,672	0/0:21,0:21:63.20:0,63,780	0/0:14,0:14:42.08:0,42,489
chr10	20150349	.	A	AAAG	13803.53	PASS	AB=0.889;AC=35;AF=0.625;AN=56;BaseQRankSum=10.079;DP=677;FS=6.036;HRun=0;HaplotypeScore=100.7765;InbreedingCoeff=0.9066;MQ=67.72;MQ0=33;MQRankSum=-2.043;QD=37.21;ReadPosRankSum=2.089;VQSLOD=5.8514;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:97.59:0,98,1698	0/0:11,0:11:33.08:0,33,534	0/0:63,0:24:49.35:0,49,544	0/0:73,0:30:44.02:0,44,540	0/0:28,0:28:84.27:0,84,1451	1/1:3,24:25:48.12:1084,48,0	1/1:3,21:21:30.10:697,30,0	1/1:1,24:26:69.19:1319,69,0	0/0:14,0:14:39.08:0,39,687	1/1:5,24:28:69.07:1440,69,0	1/1:0,19:20:42.08:856,42,0	1/1:1,17:17:33.11:774,33,0	1/1:0,16:16:24.08:534,24,0	1/1:1,20:23:39.13:906,39,0	0/0:21,0:21:63.21:0,63,1083	1/1:1,11:11:21.07:497,21,0	1/1:5,25:30:57.14:1192,57,0	1/1:1,6:6:18.06:426,18,0	1/1:1,16:17:45.15:918,45,0	1/1:1,20:23:39.06:821,39,0	1/1:3,6:7:6.02:142,6,0	1/1:2,12:14:30.10:638,30,0	1/1:1,16:16:33.11:710,33,0	1/1:1,28:27:33.11:780,33,0	0/0:22,0:22:66.23:0,66,1148	0/1:21,3:24:71.78:72,0,962	0/0:21,0:21:63.21:0,63,1093	0/0:14,0:14:42.14:0,42,695
chr10	20150461	.	TA	T	283.62	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=0.552;DP=451;FS=4.609;HRun=7;HaplotypeScore=77.6187;InbreedingCoeff=0.6541;MQ=76.79;MQ0=2;MQRankSum=3.459;QD=8.59;ReadPosRankSum=-3.790;VQSLOD=0.6949;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,105,1267	0/0:11,0:11:33.08:0,33,388	0/0:17,0:17:12.86:0,13,242	0/1:13,0:14:2.23:2,0,183	0/0:23,0:23:60.14:0,60,693	0/0:17,0:17:28.01:0,28,215	0/0:19,0:19:42.30:0,42,326	1/1:3,16:18:41.97:378,42,0	0/0:15,0:15:39.08:0,39,440	0/0:17,0:17:40.43:0,40,318	0/0:12,0:12:12.06:0,12,173	0/0:4,0:4:8.98:0,9,72	0/0:16,0:16:47.88:0,48,383	0/0:13,0:12:29.91:0,30,249	0/0:18,0:18:54.09:0,54,626	0/0:14,0:14:38.92:0,39,315	0/0:29,0:29:74.81:0,75,616	0/0:16,0:15:38.83:0,39,303	0/0:16,0:16:41.91:0,42,346	0/0:14,0:14:33.57:0,34,259	0/0:13,0:13:26.96:0,27,227	0/0:7,0:7:17.94:0,18,140	0/0:12,0:12:9.83:0,10,95	0/0:16,0:16:33.33:0,33,255	0/0:8,0:8:24.06:0,24,279	0/0:24,0:24:66.14:0,66,758	0/0:22,0:22:63.13:0,63,748	0/0:8,0:8:21.07:0,21,264
chr10	20150468	.	A	AGG	7047.57	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=-2.125;DP=482;FS=2.479;HRun=8;HaplotypeScore=75.0604;InbreedingCoeff=0.9414;MQ=75.03;MQ0=2;MQRankSum=-0.699;QD=27.32;ReadPosRankSum=0.053;VQSLOD=4.7534;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:85.40:0,85,1116	0/0:10,0:10:24.05:0,24,267	0/0:18,0:17:16.56:0,17,201	0/0:13,0:13:1.44:0,1,146	0/0:21,0:21:48.12:0,48,535	1/1:5,18:23:21.07:332,21,0	1/1:2,15:17:39.13:617,39,0	0/0:22,0:21:23.85:0,24,184	0/0:14,0:15:26.88:0,27,359	1/1:6,12:19:36.12:547,36,0	1/1:5,6:11:15.05:238,15,0	1/1:0,5:5:8.75:142,9,0	1/1:2,17:21:45.37:639,45,0	1/1:2,11:12:30.10:453,30,0	0/0:21,0:21:51.10:0,51,558	1/1:3,13:16:33.11:524,33,0	1/1:3,27:31:66.23:1047,66,0	1/1:2,13:16:32.08:444,32,0	1/1:7,11:19:35.48:525,35,0	1/1:4,7:13:24.08:346,24,0	1/1:3,9:12:21.06:311,21,0	1/1:2,7:9:15.05:226,15,0	1/1:3,10:15:15.05:227,15,0	1/1:3,13:16:27.09:429,27,0	0/0:9,0:9:21.05:0,21,234	0/0:22,1:23:9.44:0,9,553	0/0:25,0:25:63.13:0,63,688	0/0:9,0:9:20.99:0,21,220
chr10	20150913	.	TG	T	12795.32	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=9.400;DP=657;FS=0.308;HRun=3;HaplotypeScore=115.3402;InbreedingCoeff=0.9709;MQ=70.26;MQ0=0;MQRankSum=-1.905;QD=29.97;ReadPosRankSum=-0.109;VQSLOD=3.8735;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,120,1686	0/0:12,0:12:36.12:0,36,511	0/0:15,0:15:36.17:0,36,413	0/0:7,0:6:14.21:0,14,135	0/0:32,0:32:90.27:0,90,1245	1/1:1,24:25:51.16:631,51,0	1/1:0,24:24:66.21:817,66,0	1/1:1,26:27:78.17:913,78,0	1/1:22,0:22:44.98:214,45,0	1/1:2,23:25:70.32:772,70,0	1/1:2,17:19:48.02:556,48,0	1/1:0,24:24:54.17:666,54,0	1/1:0,27:27:78.25:964,78,0	1/1:0,26:26:59.72:742,60,0	0/0:24,0:24:63.20:0,63,885	1/1:2,24:26:66.21:817,66,0	1/1:2,20:22:54.17:667,54,0	1/1:1,23:24:63.20:779,63,0	1/1:0,23:23:66.14:783,66,0	1/1:1,19:20:57.12:677,57,0	1/1:1,26:27:69.22:854,69,0	1/1:2,17:19:53.91:609,54,0	1/1:1,23:24:47.73:555,48,0	1/1:0,23:23:63.20:780,63,0	0/0:29,0:29:84.24:0,84,1151	0/0:35,0:35:99:0,102,1334	0/0:33,0:33:99:0,99,1304	0/0:1,0:1:3.01:0,3,43
chr10	20150915	.	G	GA	508.87	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-0.272;DP=652;FS=0.000;HRun=0;HaplotypeScore=157.4998;InbreedingCoeff=0.8336;MQ=70.97;MQ0=0;MQRankSum=-0.344;QD=21.20;ReadPosRankSum=0.077;VQSLOD=4.2982;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,120,1660	0/0:12,0:12:36.12:0,36,501	0/0:15,0:15:36.38:0,36,380	0/0:7,0:6:14.74:0,15,134	0/0:31,0:31:90.30:0,90,1252	0/0:24,0:24:37.74:0,38,119	0/0:24,0:24:48.84:0,49,154	0/0:27,0:27:55.20:0,55,191	1/1:3,20:24:44.96:604,45,0	0/0:24,0:24:25.76:0,26,178	0/0:18,0:18:34.24:0,34,125	0/0:24,0:24:39.96:0,40,126	0/0:27,0:27:57.73:0,58,183	0/0:26,0:26:44.40:0,44,141	0/0:22,0:22:63.02:0,63,880	0/0:24,0:24:48.84:0,49,154	0/0:20,0:20:40.11:0,40,127	0/0:24,0:24:49.62:0,50,172	0/0:26,0:26:54.19:0,54,207	0/0:20,0:20:41.14:0,41,137	0/0:26,0:26:51.06:0,51,161	0/0:19,0:19:41.06:0,41,154	0/0:25,0:25:20.33:0,20,119	0/0:24,0:24:49.59:0,50,167	0/0:28,0:28:84.28:0,84,1171	0/0:36,0:36:99:0,102,1406	0/0:33,0:33:99:0,99,1376	0/0:1,0:1:3.01:0,3,42
chr10	20151131	.	TCAC	T	17031.72	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=15.463;DP=686;FS=1.701;HRun=0;HaplotypeScore=101.8184;InbreedingCoeff=0.9971;MQ=81.05;MQ0=0;MQRankSum=-6.036;QD=39.43;ReadPosRankSum=2.774;VQSLOD=6.1390;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,126,2751	0/0:13,0:13:39.12:0,39,807	0/0:19,0:19:55.97:0,56,1126	0/0:22,0:22:54.19:0,54,1171	0/0:16,0:16:42.12:0,42,822	1/1:0,20:20:45.15:749,45,0	1/1:0,38:38:93.32:1532,93,0	1/1:1,27:28:78.27:1286,78,0	0/0:26,0:26:78.25:0,78,1723	1/1:0,14:14:42.13:667,42,0	1/1:0,12:12:36.01:537,36,0	1/1:1,27:28:72.25:1198,72,0	1/1:1,22:23:60.20:998,60,0	1/1:2,25:28:63.19:1047,63,0	0/0:30,0:30:84.27:0,84,1821	1/1:0,23:23:63.22:1049,63,0	1/1:1,42:43:85.53:1389,86,0	1/1:2,22:24:45.15:748,45,0	1/1:3,22:25:66.17:980,66,0	1/1:3,13:16:45.15:747,45,0	1/1:1,42:43:99:1838,114,0	1/1:1,6:7:15.05:250,15,0	1/1:2,17:20:42.10:667,42,0	1/1:1,39:40:81.28:1349,81,0	0/0:17,0:17:45.13:0,45,930	0/0:26,0:26:41.37:0,41,1610	0/0:35,0:35:99:0,105,2234	0/0:7,0:7:21.07:0,21,468
chr10	20151823	.	G	GAGTCAGTC	6827.76	PASS	AB=0.600;AC=33;AF=0.589;AN=56;BaseQRankSum=11.347;DP=679;FS=15.669;HRun=0;HaplotypeScore=189.0347;InbreedingCoeff=0.9211;MQ=74.58;MQ0=3;MQRankSum=-1.917;QD=16.33;ReadPosRankSum=2.088;VQSLOD=2.6942;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:75.19:0,75,1768	0/0:15,0:15:33.11:0,33,846	0/0:27,0:22:24.05:0,24,476	0/0:25,0:25:38.12:0,38,853	0/0:29,0:29:49.29:0,49,948	1/1:7,0:23:38.96:321,39,0	1/1:10,0:32:47.96:404,48,0	0/0:15,0:27:21.07:0,21,377	1/1:8,12:22:30.10:1244,30,0	1/1:6,0:18:38.95:323,39,0	1/1:5,0:22:23.98:226,24,0	1/1:5,0:23:47.94:395,48,0	1/1:6,0:22:29.97:247,30,0	0/1:9,0:27:99:276,0,109	0/0:15,0:15:33.06:0,33,712	1/1:7,0:26:50.96:446,51,0	1/1:7,0:27:50.94:420,51,0	1/1:8,0:29:47.96:436,48,0	1/1:8,0:19:37.82:409,38,0	1/1:7,0:25:50.93:419,51,0	1/1:8,0:25:38.96:321,39,0	1/1:6,0:16:17.98:148,18,0	1/1:5,0:18:23.66:202,24,0	1/1:9,0:38:68.94:591,69,0	0/0:22,0:22:57.13:0,57,1403	0/0:34,0:34:63.09:0,63,1330	0/0:26,0:27:45.15:0,45,1133	0/0:5,0:5:15.05:0,15,357
chr10	20152085	.	T	TA	7998.82	PASS	AB=0.714;AC=33;AF=0.589;AN=56;BaseQRankSum=-11.053;DP=556;FS=0.748;HRun=10;HaplotypeScore=89.8200;InbreedingCoeff=0.8899;MQ=69.78;MQ0=0;MQRankSum=-1.498;QD=22.92;ReadPosRankSum=-2.806;VQSLOD=4.0738;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:1,0:25:44.81:0,45,130	0/0:0,0:10:18.33:0,18,53	0/0:13,0:9:8.91:0,9,74	0/0:15,0:15:19.74:0,20,208	0/0:4,0:26:39.93:0,40,115	1/1:2,11:13:30.08:320,30,0	1/1:2,15:17:45.11:478,45,0	1/1:6,25:31:69.12:710,69,0	0/0:1,0:15:24.44:0,24,71	1/1:5,20:25:57.14:607,57,0	1/1:10,20:30:60.04:617,60,0	1/1:2,13:15:17.46:391,17,0	1/1:6,22:28:10.86:526,11,0	1/1:2,12:15:14.32:342,14,0	0/0:23,0:23:53.89:0,54,436	1/1:1,14:15:33.08:352,33,0	1/1:2,30:32:81.20:863,81,0	1/1:3,10:13:27.07:288,27,0	1/1:11,15:26:49.37:513,49,0	1/1:4,21:27:65.76:645,66,0	0/1:3,2:5:18.63:26,0,19	1/1:4,16:20:45.07:468,45,0	1/1:4,18:22:7.86:494,8,0	1/1:3,12:15:14.54:359,15,0	0/0:4,0:20:26.48:0,26,77	0/0:2,1:33:29.72:0,30,140	0/0:1,0:19:36.66:0,37,106	0/0:0,0:7:12.22:0,12,35
chr10	20153273	.	GATAGAT	G	7189.93	PASS	AB=1.000;AC=27;AF=0.563;AN=48;BaseQRankSum=-7.553;DP=455;FS=0.561;HRun=0;HaplotypeScore=108.8398;InbreedingCoeff=0.8282;MQ=68.83;MQ0=14;MQRankSum=-0.199;QD=31.67;ReadPosRankSum=3.086;VQSLOD=4.7557;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:20:24.10:0,24,99	0/0:5,0:5:4.26:0,4,10	0/0:38,0:21:53.87:0,54,817	0/0:49,0:16:31.53:0,32,580	0/0:11,0:11:12.26:0,12,72	1/1:14,0:12:21.06:291,21,0	1/1:16,0:16:36.12:538,36,0	1/1:3,29:32:85.62:1220,86,0	0/0:6,0:6:11.56:0,12,79	1/1:1,13:13:39.07:608,39,0	./.	1/1:11,0:11:18.06:249,18,0	1/1:13,0:13:30.03:350,30,0	1/1:9,0:9:21.07:289,21,0	0/0:12,0:12:30.10:0,30,488	1/1:18,0:17:42.13:551,42,0	1/1:23,0:22:41.33:847,41,0	1/1:14,0:13:36.12:555,36,0	1/1:0,17:17:51.17:792,51,0	./.	1/1:17,0:16:36.12:589,36,0	./.	./.	1/1:18,0:17:20.42:306,20,0	0/1:11,0:10:5.30:5,0,5	0/0:15,0:14:0.79:0,1,26	0/0:10,0:10:1.79:0,2,21	0/0:17,0:17:10.30:0,10,24
chr10	20153837	.	CGTGT	C	640.27	PASS	AB=0.914;AC=26;AF=0.867;AN=30;BaseQRankSum=-0.080;DP=509;FS=6.668;HRun=0;HaplotypeScore=105.5024;InbreedingCoeff=-0.1098;MQ=52.84;MQ0=26;MQRankSum=-2.087;QD=2.10;ReadPosRankSum=1.846;VQSLOD=1.4365;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	1/1:3,0:5:3:28,3,0	./.	./.	1/1:28,0:26:3:28,3,0	1/1:17,0:17:3:28,3,0	0/1:20,5:24:11.88:71,0,12	./.	./.	./.	./.	1/1:14,0:13:6.01:74,6,0	./.	./.	1/1:11,2:14:5.98:66,6,0	1/1:16,3:19:5.76:91,6,0	1/1:21,2:20:3.01:46,3,0	0/1:22,2:25:0.41:98,0,0	./.	1/1:21,0:21:3.01:46,3,0	0/1:36,2:35:0:0,0,0	1/1:14,0:14:3:25,3,0	./.	0/1:18,0:17:4.32:13,0,4	1/1:19,0:21:6.01:56,6,0	./.	1/1:15,0:19:6.01:56,6,0	./.
chr10	20155542	.	TA	T	4634.58	PASS	AB=1.000;AC=30;AF=0.536;AN=56;BaseQRankSum=-11.199;DP=383;FS=12.231;HRun=6;HaplotypeScore=80.8185;InbreedingCoeff=0.4299;MQ=67.41;MQ0=0;MQRankSum=3.426;QD=18.32;ReadPosRankSum=-3.169;VQSLOD=2.9009;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,37:40:99:1126,105,0	1/1:1,3:4:9.02:97,9,0	0/0:17,0:14:35.57:0,36,407	0/1:7,0:6:8.52:9,0,35	1/1:0,15:15:39.10:419,39,0	0/0:31,0:31:31.10:0,31,71	0/0:12,0:12:12.44:0,12,29	0/1:31,0:31:15.58:179,0,16	1/1:1,9:10:18.04:193,18,0	1/1:6,0:6:1.67:38,2,0	0/1:10,0:10:5.36:50,0,5	0/0:6,0:6:7.47:0,7,18	0/0:8,0:8:3.11:0,3,7	0/0:5,0:5:3.11:0,3,7	0/0:10,0:10:24.08:0,24,316	0/0:6,0:6:1.55:0,2,4	0/0:30,0:30:12.33:0,12,63	0/1:17,0:17:9.72:20,0,10	0/1:18,0:18:4.55:190,0,5	1/1:7,0:7:2.94:86,3,0	1/1:1,2:3:3.01:32,3,0	1/1:0,1:1:3.01:32,3,0	0/1:8,0:8:2.28:39,0,2	0/0:5,0:5:4.66:0,5,11	1/1:0,25:25:69.17:741,69,0	1/1:4,21:25:63.15:677,63,0	1/1:1,13:14:33.08:354,33,0	1/1:0,12:12:33.08:355,33,0
chr10	20155543	.	A	ATAAT	11884.66	PASS	AB=1.000;AC=38;AF=0.679;AN=56;BaseQRankSum=-10.114;DP=390;FS=5.123;HRun=0;HaplotypeScore=74.4632;InbreedingCoeff=0.4912;MQ=67.46;MQ0=0;MQRankSum=-3.103;QD=39.48;ReadPosRankSum=-2.864;VQSLOD=4.0185;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:40,0:40:60.28:60,0,668	0/0:4,0:4:12:0,12,106	0/0:17,0:14:39.12:0,39,678	0/0:7,0:6:11.95:0,12,113	0/0:15,0:15:33.93:0,34,329	1/1:1,29:32:60.20:1697,60,0	1/1:1,11:13:24.08:677,24,0	1/1:0,26:30:90.26:1927,90,0	0/1:11,0:11:75.60:76,0,109	1/1:0,6:6:15.05:332,15,0	1/1:0,10:10:30.01:674,30,0	1/1:0,6:7:15.05:424,15,0	1/1:0,5:10:6.02:170,6,0	1/1:0,4:4:6.02:169,6,0	0/0:10,0:10:30.09:0,30,534	1/1:0,3:6:3.01:85,3,0	1/1:0,29:31:87.30:2426,87,0	1/1:0,15:18:27.09:749,27,0	1/1:0,17:19:57.12:1048,57,0	1/1:0,6:7:21.01:369,21,0	1/1:4,0:4:6:56,6,0	1/1:1,0:1:3.01:32,3,0	1/1:0,6:8:18.05:400,18,0	1/1:1,3:5:9.03:255,9,0	0/1:25,0:25:99:165,0,325	0/0:24,0:24:4.50:0,5,528	0/1:14,0:14:92.85:93,0,175	0/0:12,0:12:0.51:0,1,208
chr10	20155923	.	GA	G	8940.39	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-11.449;DP=695;FS=0.311;HRun=10;HaplotypeScore=99.5590;InbreedingCoeff=0.9990;MQ=68.02;MQ0=0;MQRankSum=-2.298;QD=21.91;ReadPosRankSum=0.481;VQSLOD=4.8719;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:42:79.91:0,80,424	0/0:1,0:9:20.01:0,20,105	0/0:20,0:17:27.05:0,27,275	0/0:21,0:18:34.38:0,34,366	0/0:3,0:30:70.64:0,71,376	1/1:1,20:21:56.99:495,57,0	1/1:3,16:19:41.99:365,42,0	1/1:4,28:32:83.95:726,84,0	0/0:9,0:31:57.66:0,58,317	1/1:4,24:28:68.96:599,69,0	1/1:1,14:15:32.96:286,33,0	1/1:0,21:21:59.99:521,60,0	1/1:1,26:27:71.97:625,72,0	1/1:4,30:34:83.78:716,84,0	0/0:28,1:29:52.16:0,52,804	1/1:5,24:29:71.97:625,72,0	1/1:3,23:26:65.98:573,66,0	1/1:2,20:22:53.99:469,54,0	1/1:1,20:21:59.93:514,60,0	1/1:4,13:17:41.02:345,41,0	1/1:2,22:24:62.93:546,63,0	1/1:2,11:13:29.99:260,30,0	1/1:2,20:22:56.98:495,57,0	1/1:5,32:37:89.98:781,90,0	0/0:3,0:29:71.18:0,71,367	0/0:4,0:28:66.42:0,66,365	0/0:4,0:26:56.98:0,57,302	0/0:3,0:22:51.60:0,52,294
chr10	20156866	.	TTC	T	7132.35	PASS	AB=1.000;AC=51;AF=0.911;AN=56;BaseQRankSum=1.925;DP=455;FS=8.624;HRun=0;HaplotypeScore=99.8091;InbreedingCoeff=0.7024;MQ=52.21;MQ0=8;MQRankSum=-1.769;QD=17.31;ReadPosRankSum=-0.562;VQSLOD=4.4339;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:25:50.74:341,51,0	1/1:7,0:7:13.36:92,13,0	0/1:21,0:5:16.42:16,0,34	0/0:27,0:11:15.73:0,16,120	1/1:15,0:15:28.10:179,28,0	1/1:8,6:14:37.49:383,37,0	1/1:13,5:18:47.66:464,48,0	1/1:30,0:28:64.97:472,65,0	1/1:8,0:8:16.09:106,16,0	1/1:10,6:16:24.86:411,25,0	1/1:9,0:9:11.69:72,12,0	1/1:15,1:16:35.09:348,35,0	1/1:9,1:10:20.76:173,21,0	1/1:8,2:10:29.92:294,30,0	0/0:16,0:15:41.90:0,42,518	1/1:14,1:15:35.83:316,36,0	1/1:5,22:25:14.53:171,15,0	1/1:12,8:19:39.85:405,40,0	1/1:14,3:16:43.04:422,43,0	1/1:10,9:19:56.83:595,57,0	1/1:3,4:5:5.99:62,6,0	1/1:4,3:7:14.99:152,15,0	1/1:8,5:13:27:300,27,0	1/1:11,3:13:15.52:125,16,0	1/1:15,0:15:30.67:272,31,0	1/1:25,0:24:57.81:422,58,0	1/1:25,0:24:55.19:416,55,0	1/1:9,0:9:16.97:125,17,0
chr10	20156867	.	TC	T	6115.79	PASS	AB=0.955;AC=51;AF=0.911;AN=56;BaseQRankSum=1.970;DP=450;FS=1.618;HRun=1;HaplotypeScore=96.1890;InbreedingCoeff=0.7056;MQ=52.01;MQ0=8;MQRankSum=-2.112;QD=15.03;ReadPosRankSum=-0.504;VQSLOD=4.4412;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:23,2:25:51.37:367,51,0	1/1:6,0:6:14.92:118,15,0	0/1:20,1:5:15.17:15,0,24	0/0:25,2:11:14.75:0,15,113	1/1:12,2:15:28.92:179,29,0	1/1:13,1:14:38.71:283,39,0	1/1:17,1:19:47.45:368,47,0	1/1:4,27:29:63.09:596,63,0	1/1:8,0:8:21.07:139,21,0	1/1:14,2:16:24.59:278,25,0	1/1:1,0:9:11.50:67,11,0	1/1:15,1:16:25.93:292,26,0	1/1:10,0:10:20.70:144,21,0	1/1:10,0:10:29.84:237,30,0	0/0:16,0:15:41.52:0,42,387	1/1:10,3:13:35.72:261,36,0	1/1:27,0:25:13.73:91,14,0	1/1:18,1:18:40.86:286,41,0	1/1:6,0:16:35.59:287,36,0	1/1:19,0:19:56.48:393,56,0	1/1:6,1:5:5.94:41,6,0	1/1:6,0:6:14.80:105,15,0	1/1:11,1:12:26.84:205,27,0	1/1:12,2:13:16.06:108,16,0	1/1:14,0:14:30.44:255,30,0	1/1:21,4:24:57.33:425,57,0	1/1:23,2:24:59.78:453,60,0	1/1:5,4:9:16.72:123,17,0
chr10	20156870	.	TTTC	T	4195.78	PASS	AB=1.000;AC=48;AF=0.857;AN=56;BaseQRankSum=0.601;DP=456;FS=15.490;HRun=0;HaplotypeScore=114.9451;InbreedingCoeff=0.4500;MQ=48.16;MQ0=9;MQRankSum=-2.735;QD=10.09;ReadPosRankSum=2.472;VQSLOD=2.5830;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:24,1:25:38.21:275,38,0	1/1:6,0:6:11.41:77,11,0	0/1:21,0:5:2.70:3,0,39	0/0:24,0:8:10.99:0,11,60	1/1:15,2:17:29.06:178,29,0	1/1:13,0:13:31.51:187,32,0	1/1:17,0:18:33.98:229,34,0	1/1:31,0:29:30.67:255,31,0	1/1:8,0:8:12:72,12,0	0/1:16,0:16:27.26:158,0,27	1/1:9,0:9:8.69:50,9,0	1/1:16,0:16:17.70:253,18,0	1/1:11,0:11:17.57:109,18,0	1/1:10,0:10:17.46:145,17,0	0/0:16,0:15:43.39:0,43,866	1/1:13,0:13:24.56:163,25,0	0/1:29,0:27:5.69:17,0,6	1/1:19,0:18:18.75:166,19,0	1/1:17,0:16:34.87:245,35,0	1/1:23,0:23:35.13:242,35,0	0/1:7,0:5:3.32:14,0,3	1/1:7,0:6:1.42:20,1,0	1/1:12,0:12:20.52:129,21,0	1/1:15,0:15:9.43:53,9,0	1/1:14,0:14:31.58:256,32,0	1/1:22,3:24:54.15:377,54,0	1/1:24,0:23:52.64:388,53,0	1/1:8,1:9:16.48:136,16,0
chr10	20156871	.	TTC	T	4330.65	PASS	AB=1.000;AC=51;AF=0.911;AN=56;BaseQRankSum=1.537;DP=443;FS=6.856;HRun=0;HaplotypeScore=105.8718;InbreedingCoeff=0.4049;MQ=48.39;MQ0=9;MQRankSum=-3.564;QD=10.14;ReadPosRankSum=1.498;VQSLOD=4.0064;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:22:36.81:290,37,0	1/1:5,0:5:11.54:85,12,0	1/1:18,0:5:1.17:18,1,0	0/1:22,0:8:0.43:0,0,54	1/1:17,0:17:32.94:196,33,0	1/1:13,0:13:29.24:154,29,0	1/1:18,0:18:33.53:209,34,0	1/1:31,0:29:30.30:320,30,0	1/1:8,0:8:16.47:105,16,0	0/1:16,0:16:23.61:149,0,24	1/1:9,0:9:8.78:53,9,0	1/1:16,0:16:29.94:246,30,0	1/1:11,0:11:17.39:103,17,0	1/1:9,0:9:24.83:159,25,0	0/0:16,0:15:43.39:0,43,727	1/1:12,0:12:25.62:181,26,0	1/1:29,0:27:2.04:20,2,0	1/1:19,0:18:23.91:158,24,0	1/1:17,0:16:33.57:222,34,0	1/1:22,0:22:43.60:245,44,0	0/1:7,0:5:3.20:11,0,3	1/1:7,0:6:7.83:29,8,0	1/1:12,0:12:25.85:159,26,0	1/1:16,0:15:12.50:71,12,0	1/1:14,0:14:30.09:269,30,0	1/1:24,1:24:57.04:397,57,0	1/1:22,1:22:51.70:365,52,0	1/1:7,2:9:16.08:117,16,0
chr10	20156873	.	CTTTTCTT	C	4448.93	PASS	AB=0.941;AC=44;AF=0.786;AN=56;BaseQRankSum=2.193;DP=441;FS=9.509;HRun=0;HaplotypeScore=138.6188;InbreedingCoeff=0.3263;MQ=48.61;MQ0=10;MQRankSum=-2.265;QD=11.29;ReadPosRankSum=-1.321;VQSLOD=3.1189;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:22:37.06:327,37,0	1/1:5,0:5:11.27:91,11,0	0/1:15,0:5:0.41:12,0,0	0/0:22,0:8:14.19:0,14,74	1/1:18,0:18:29.50:212,30,0	1/1:10,2:12:29.90:288,30,0	1/1:17,1:18:41.85:431,42,0	0/1:27,0:29:51.29:117,0,51	0/0:8,0:8:2.64:0,3,59	0/1:15,1:16:16.58:260,0,17	1/1:9,0:9:8.88:58,9,0	0/1:15,1:16:47.58:210,0,48	1/1:11,0:11:12.40:101,12,0	1/1:9,0:9:23.71:171,24,0	0/0:17,0:16:48.14:0,48,1106	1/1:10,0:11:25.13:229,25,0	0/1:28,0:26:0.44:20,0,0	1/1:18,1:18:2.97:181,3,0	1/1:16,1:16:32.90:297,33,0	1/1:22,1:22:49.91:403,50,0	1/1:6,0:5:2.97:20,3,0	1/1:7,0:6:5.87:36,6,0	1/1:12,0:12:20.35:141,20,0	0/1:14,0:15:0.55:31,0,1	1/1:14,0:14:29.27:224,29,0	1/1:23,0:22:31.95:242,32,0	1/1:23,0:22:41.40:269,41,0	1/1:12,0:12:10.79:76,11,0
chr10	20157372	.	CAGACAGACAG	C	4340.04	PASS	AB=0.979;AC=38;AF=0.731;AN=52;BaseQRankSum=-1.331;DP=298;FS=3.480;HRun=0;HaplotypeScore=89.4109;InbreedingCoeff=0.2560;MQ=67.42;MQ0=8;MQRankSum=-2.940;QD=19.91;ReadPosRankSum=-1.839;VQSLOD=3.4450;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:19:28.12:374,28,0	1/1:1,0:8:2.90:16,3,0	0/0:20,0:13:33.09:0,33,888	0/0:24,0:16:45.59:0,46,1147	1/1:7,0:8:2.84:25,3,0	1/1:3,0:3:4.26:74,4,0	0/1:25,0:25:2.05:650,0,2	1/1:11,0:10:17.84:283,18,0	1/1:1,11:12:6.02:192,6,0	0/1:6,0:5:42:125,0,42	./.	1/1:9,0:8:15.52:268,16,0	0/1:8,0:6:41.84:113,0,42	1/1:7,0:6:3.01:32,3,0	0/0:20,0:20:42.14:0,42,1692	0/1:18,0:18:31.83:216,0,32	1/1:10,0:9:11.87:111,12,0	0/1:5,0:5:20.22:99,0,20	1/1:6,0:5:12.01:204,12,0	1/1:4,0:3:6.02:100,6,0	1/1:14,0:13:18.51:250,19,0	./.	1/1:3,0:3:3.01:50,3,0	0/1:12,0:14:1.72:329,0,2	0/0:0,0:8:0.47:0,0,1	1/1:11,0:14:24.04:400,24,0	1/1:9,0:9:17.94:257,18,0	1/1:5,0:5:12.02:175,12,0
chr10	20157376	.	CAG	C	1642.87	PASS	AB=1.000;AC=41;AF=0.788;AN=52;BaseQRankSum=6.621;DP=300;FS=2.594;HRun=0;HaplotypeScore=71.9530;InbreedingCoeff=0.6340;MQ=60.68;MQ0=8;MQRankSum=-3.854;QD=7.64;ReadPosRankSum=-0.415;VQSLOD=2.7700;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:22:21:186,21,0	0/0:8,0:9:2.97:0,3,20	0/0:18,0:10:30.07:0,30,526	0/0:25,0:16:42.12:0,42,722	1/1:9,1:10:3.01:39,3,0	1/1:5,0:5:5.83:37,6,0	1/1:26,0:26:33.43:247,33,0	1/1:12,0:11:13.18:96,13,0	1/1:12,0:12:5.64:28,6,0	1/1:7,0:6:17.01:108,17,0	./.	1/1:9,0:8:17.71:116,18,0	1/1:7,0:5:5.46:41,5,0	1/1:7,0:6:2.92:17,3,0	0/0:19,0:19:42.13:0,42,741	1/1:17,0:17:14.75:97,15,0	1/1:9,0:8:5.87:40,6,0	1/1:5,0:5:7.67:48,8,0	1/1:6,0:5:9.33:60,9,0	1/1:4,0:3:3:25,3,0	1/1:11,0:10:9.46:75,9,0	./.	0/1:2,0:2:0:0,0,0	1/1:13,0:13:16.92:117,17,0	0/0:6,2:8:0.47:0,0,1	1/1:16,1:17:33.59:209,34,0	1/1:8,0:8:14.73:95,15,0	1/1:6,0:6:14.83:111,15,0
chr10	20159556	.	TGC	T	2123.56	PASS	AB=1.000;AC=16;AF=0.286;AN=56;BaseQRankSum=0.924;DP=587;FS=7.612;HRun=0;HaplotypeScore=81.9501;InbreedingCoeff=0.8192;MQ=79.08;MQ0=12;MQRankSum=1.307;QD=15.06;ReadPosRankSum=0.444;VQSLOD=3.0610;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:21,0:20:5.81:263,0,6	1/1:11,0:11:15.73:223,16,0	0/0:31,0:27:57.88:0,58,598	0/0:33,0:21:43.88:0,44,315	1/1:12,0:12:3.01:137,3,0	0/0:15,0:14:32.87:0,33,285	0/0:20,0:20:41.75:0,42,350	1/1:2,24:25:71.07:575,71,0	1/1:16,0:15:33.35:275,33,0	0/0:12,0:12:31.16:0,31,321	0/0:14,0:14:29.77:0,30,238	0/0:30,0:30:67.99:0,68,626	0/0:17,0:16:32.42:0,32,201	0/0:26,0:26:54.30:0,54,410	0/0:22,0:20:39.61:0,40,288	0/0:21,0:21:50.84:0,51,517	0/0:28,0:28:67.70:0,68,587	0/0:19,0:19:41.96:0,42,462	0/0:35,0:35:95.98:0,96,828	0/0:22,0:22:44.47:0,44,354	0/0:34,0:32:65.23:0,65,511	0/0:11,0:11:26.96:0,27,256	0/0:17,0:17:22.10:0,22,176	0/0:38,0:37:77.15:0,77,711	1/1:14,0:13:19.68:238,20,0	1/1:19,0:19:15.11:288,15,0	1/1:19,0:18:40.60:312,41,0	0/1:3,0:3:7.06:7,0,30
chr10	20159559	.	G	GCT	1576.65	PASS	AB=0.912;AC=45;AF=0.833;AN=54;BaseQRankSum=2.187;DP=673;FS=5.420;HRun=0;HaplotypeScore=130.1452;InbreedingCoeff=-0.1329;MQ=72.94;MQ0=15;MQRankSum=-0.551;QD=2.45;ReadPosRankSum=-1.755;VQSLOD=1.8354;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:21:14.98:124,15,0	1/1:12,0:12:2.96:19,3,0	1/1:31,0:26:0.47:1,0,0	0/1:31,0:19:0:0,0,0	1/1:14,0:14:5.70:49,6,0	1/1:15,3:17:3.01:44,3,0	1/1:14,10:25:9:115,9,0	./.	1/1:29,0:28:14.05:124,14,0	1/1:9,2:11:3.48:46,3,0	1/1:16,4:20:3.01:44,3,0	0/1:26,0:26:64.59:80,0,65	1/1:16,0:21:3.47:27,3,0	1/1:27,1:28:5.96:89,6,0	1/1:27,0:25:14.87:124,15,0	0/1:17,5:22:47.36:47,0,81	0/1:20,9:31:51.69:115,0,52	0/1:14,4:18:32.14:32,0,72	0/1:42,0:42:10.45:60,0,10	1/1:23,1:25:2.84:44,3,0	1/1:24,11:33:6.02:89,6,0	0/1:12,0:12:0:0,0,0	1/1:15,5:19:3.01:44,3,0	0/1:32,8:43:46.91:148,0,47	1/1:20,0:18:2.71:25,3,0	1/1:22,0:21:13.33:116,13,0	1/1:24,0:23:11.61:75,12,0	0/1:9,0:6:10.40:18,0,10
chr10	20160910	.	G	GC	8288.77	PASS	AB=0.538;AC=31;AF=0.554;AN=56;BaseQRankSum=-15.935;DP=532;FS=13.181;HRun=8;HaplotypeScore=63.7789;InbreedingCoeff=0.8768;MQ=86.62;MQ0=0;MQRankSum=-4.382;QD=27.36;ReadPosRankSum=1.144;VQSLOD=4.5467;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:28:32.13:0,32,104	0/0:0,0:4:8.15:0,8,24	0/0:26,0:26:54.15:0,54,505	0/0:15,0:15:32.97:0,33,292	0/0:2,0:23:36.44:0,36,106	1/1:0,12:12:27.08:312,27,0	1/1:0,29:29:78.23:900,78,0	0/0:5,0:25:26.27:0,26,76	0/0:4,0:23:36.66:0,37,107	1/1:3,16:19:51.10:562,51,0	0/1:1,6:7:6.41:187,0,6	1/1:2,14:16:42.12:485,42,0	1/1:5,10:15:24.02:261,24,0	1/1:0,13:13:33.10:381,33,0	0/0:19,0:19:51.01:0,51,462	1/1:2,20:22:60.18:693,60,0	1/1:3,26:29:69.21:796,69,0	1/1:1,22:22:66.20:762,66,0	1/1:5,12:17:11.65:387,12,0	1/1:6,10:16:2.63:284,3,0	1/1:3,20:23:54.16:623,54,0	1/1:3,12:15:30.09:346,30,0	1/1:3,13:16:42.12:480,42,0	1/1:1,30:31:72.21:831,72,0	0/0:2,0:10:12.22:0,12,36	0/0:2,0:28:48.88:0,49,142	0/0:1,0:22:38.70:0,39,113	0/0:3,0:6:4.07:0,4,12
chr10	20161309	.	C	CTG	10050.49	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-17.405;DP=750;FS=0.989;HRun=0;HaplotypeScore=83.4602;InbreedingCoeff=0.9993;MQ=82.94;MQ0=1;MQRankSum=-2.657;QD=45.68;ReadPosRankSum=3.040;VQSLOD=6.4294;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,36:37:93.32:1703,93,0	1/1:1,19:20:54.19:990,54,0	0/0:24,0:24:68.95:0,69,930	0/0:21,0:22:20.80:0,21,695	1/1:1,25:27:57.20:1045,57,0	0/0:21,0:21:48.16:0,48,688	0/0:25,0:25:72.20:0,72,973	1/1:2,28:31:87.25:1494,87,0	1/1:3,25:28:69.24:1264,69,0	0/0:34,0:34:75.23:0,75,1029	0/0:16,0:16:42.14:0,42,601	0/0:35,0:35:90.29:0,90,1267	0/0:27,0:27:81.26:0,81,1142	0/0:30,0:30:87.28:0,87,1227	0/0:26,0:26:75.25:0,75,1074	0/0:36,0:36:99:0,105,1467	0/0:30,0:30:84.25:0,84,1182	0/0:18,0:18:54.18:0,54,772	0/0:20,0:20:50.90:0,51,740	0/0:26,0:26:75.24:0,75,1045	0/0:57,0:57:99:0,138,1935	0/0:24,0:24:66.21:0,66,927	0/0:22,0:22:63.15:0,63,867	0/0:37,0:37:99:0,105,1448	1/1:1,14:15:36.12:660,36,0	1/1:4,25:29:35.24:1299,35,0	1/1:2,14:16:42.14:770,42,0	1/1:0,16:16:45.15:825,45,0
chr10	20162296	.	A	AGG	4337.94	PASS	AB=0.652;AC=17;AF=0.304;AN=56;BaseQRankSum=-6.477;DP=557;FS=4.268;HRun=8;HaplotypeScore=90.5214;InbreedingCoeff=0.8983;MQ=84.76;MQ0=0;MQRankSum=-2.306;QD=27.28;ReadPosRankSum=0.026;VQSLOD=4.7688;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:9,26:36:71.73:1103,72,0	1/1:0,7:7:21.07:333,21,0	0/0:27,0:26:62.96:0,63,667	0/0:25,0:25:35.45:0,35,504	1/1:4,14:18:36.08:544,36,0	0/0:23,0:23:63.17:0,63,702	0/0:12,0:12:36.10:0,36,401	1/1:18,0:18:14.51:129,15,0	1/1:17,0:17:44.99:389,45,0	0/0:25,0:25:66.16:0,66,735	0/0:18,0:18:45.12:0,45,501	0/0:26,0:26:72.19:0,72,802	0/0:14,0:14:33.08:0,33,368	0/0:14,0:14:39.09:0,39,434	0/0:21,0:21:63.17:0,63,702	0/0:24,0:25:54.05:0,54,650	0/0:27,0:27:66.17:0,66,736	0/0:22,0:21:45.09:0,45,502	0/0:19,0:19:39.09:0,39,435	0/0:20,0:20:57.14:0,57,626	0/0:16,0:16:39.10:0,39,435	0/0:19,0:19:48.11:0,48,534	0/0:22,0:22:60.13:0,60,658	0/0:22,0:23:57.07:0,57,693	1/1:5,11:16:30.57:477,31,0	0/1:7,3:15:12.92:196,0,13	1/1:7,20:29:71.72:1072,72,0	1/1:0,3:3:6.02:95,6,0
chr10	20162298	.	G	GGGGGT	2639.44	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=-7.320;DP=573;FS=4.930;HRun=0;HaplotypeScore=138.4522;InbreedingCoeff=0.6743;MQ=84.21;MQ0=0;MQRankSum=-3.976;QD=34.28;ReadPosRankSum=-3.383;VQSLOD=2.7177;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:38.33:0,38,193	0/0:7,0:7:6.20:0,6,14	0/0:28,0:27:69.23:0,69,1316	0/0:23,0:23:65.50:0,66,1100	0/0:18,0:18:7.64:0,8,19	0/0:23,0:23:63.22:0,63,1287	0/0:13,0:13:36.12:0,36,735	1/1:18,7:29:66.15:1390,66,0	1/1:2,17:21:48.16:1369,48,0	0/0:25,0:25:69.23:0,69,1368	0/0:18,0:18:45.15:0,45,919	0/0:26,0:26:75.24:0,75,1495	0/0:14,0:14:36.11:0,36,699	0/0:14,0:14:42.13:0,42,822	0/0:21,0:21:63.22:0,63,1287	0/0:25,0:25:66.18:0,66,1261	0/0:27,0:27:72.20:0,72,1394	0/0:22,0:21:54.14:0,54,992	0/0:20,0:20:51.15:0,51,988	0/0:21,0:21:60.19:0,60,1188	0/0:16,0:16:39.13:0,39,796	0/0:20,0:20:54.16:0,54,1031	0/0:23,0:23:66.19:0,66,1262	0/0:24,0:24:72.19:0,72,1357	0/0:14,0:14:8.20:0,8,19	0/0:14,0:14:1.56:0,2,144	0/1:27,0:27:2.19:2,0,85	0/0:3,0:3:1.77:0,2,4
chr10	20163917	.	T	TAGG	10756.84	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-10.164;DP=703;FS=18.858;HRun=0;HaplotypeScore=104.0377;InbreedingCoeff=0.9935;MQ=84.56;MQ0=0;MQRankSum=-6.020;QD=49.80;ReadPosRankSum=0.526;VQSLOD=5.4625;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,44:45:92.83:2075,93,0	1/1:1,6:7:18.02:366,18,0	0/0:26,0:26:69.19:0,69,1113	0/0:19,0:19:44.98:0,45,695	1/1:4,25:30:54.18:1174,54,0	0/0:14,0:14:39.13:0,39,665	0/0:31,0:31:87.28:0,87,1441	1/1:12,18:33:78.24:1584,78,0	1/1:1,26:29:66.23:1521,66,0	0/0:14,0:14:33.11:0,33,548	0/0:15,0:15:42.14:0,42,716	0/0:44,0:44:99:0,129,2173	0/0:39,0:39:99:0,117,1961	0/0:26,0:26:78.27:0,78,1325	0/0:40,0:40:99:0,120,2038	0/0:33,0:33:99:0,99,1678	0/0:24,0:24:69.22:0,69,1143	0/0:23,0:23:60.21:0,60,1023	0/0:18,0:18:51.17:0,51,863	0/0:14,0:14:39.12:0,39,635	0/0:33,0:33:96.33:0,96,1637	0/0:18,0:18:54.17:0,54,890	0/0:18,0:18:54.15:0,54,868	0/0:38,0:38:99:0,105,1736	1/1:1,6:7:12.04:261,12,0	1/1:6,19:25:24.07:1510,24,0	1/1:2,13:16:42.14:968,42,0	1/1:1,21:24:57.20:1298,57,0
chr10	20167772	.	C	CAT	600.12	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=-4.295;DP=442;FS=14.737;HRun=0;HaplotypeScore=71.2646;InbreedingCoeff=0.6569;MQ=60.66;MQ0=21;MQRankSum=1.387;QD=12.00;ReadPosRankSum=-3.250;VQSLOD=1.3608;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:27:35.95:0,36,429	0/0:6,0:6:9:0,9,99	0/1:21,0:2:0.01:0,0,0	0/0:30,0:8:1.56:0,2,34	0/0:13,0:13:33.07:0,33,380	0/0:22,0:22:45.10:0,45,526	0/0:8,0:8:12.04:0,12,148	1/1:11,16:27:48.05:694,48,0	0/0:0,0:8:14.20:0,14,70	0/0:14,0:13:30.07:0,30,357	0/0:15,0:15:30.06:0,30,343	0/0:8,0:8:21.07:0,21,260	0/0:8,0:8:18.06:0,18,223	0/0:7,0:7:12.04:0,12,149	0/0:11,0:11:17.97:0,18,190	0/0:10,0:9:21.07:0,21,260	0/0:34,0:33:78.24:0,78,963	0/0:14,0:15:35.94:0,36,423	0/0:13,0:13:20.08:0,20,209	0/0:16,0:17:32.92:0,33,371	0/0:12,0:9:12.71:0,13,180	0/0:6,0:6:8.97:0,9,93	0/0:9,0:9:24.05:0,24,273	0/0:14,0:13:21.04:0,21,243	0/0:22,0:22:48.05:0,48,547	0/0:27,0:26:57.16:0,57,668	0/0:17,0:17:27.02:0,27,293	0/0:16,0:15:27.02:0,27,290
chr10	20169127	.	T	TA	341.33	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-4.810;DP=657;FS=3.621;HRun=8;HaplotypeScore=65.0496;InbreedingCoeff=0.9712;MQ=74.46;MQ0=1;MQRankSum=0.707;QD=18.96;ReadPosRankSum=-2.902;VQSLOD=2.8858;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:87.04:0,87,796	0/0:15,0:15:33.01:0,33,302	0/0:22,0:20:25.99:0,26,196	0/0:17,0:18:12.88:0,13,258	0/0:33,0:34:86.06:0,86,770	0/0:29,0:29:83.98:0,84,752	0/0:24,0:24:68.97:0,69,615	1/1:5,13:18:39.09:436,39,0	0/0:23,0:23:59.94:0,60,532	0/0:32,0:32:80.94:0,81,722	0/0:13,0:13:33.01:0,33,302	0/0:18,0:18:48:0,48,430	0/0:15,0:15:42.02:0,42,384	0/0:20,0:20:60.03:0,60,549	0/0:19,0:19:51.02:0,51,467	0/0:19,0:19:54.02:0,54,491	0/0:39,1:40:70.40:0,70,891	0/0:32,0:31:81.03:0,81,741	0/0:26,0:26:56.98:0,57,511	0/0:20,0:20:54.02:0,54,494	0/0:20,0:20:42.02:0,42,384	0/0:17,0:17:39.01:0,39,352	0/0:10,0:10:24.01:0,24,219	0/0:37,0:37:95.05:0,95,850	0/0:16,0:16:45.02:0,45,412	0/0:46,0:46:99:0,111,992	0/0:26,0:26:72.03:0,72,654	0/0:16,0:16:48.01:0,48,434
chr10	20169320	.	ACGCGCTCGCGCGCGCGCG	A	420.14	PASS	AB=0.850;AC=4;AF=0.071;AN=56;BaseQRankSum=4.381;DP=564;FS=2.952;HRun=0;HaplotypeScore=268.0488;InbreedingCoeff=0.5135;MQ=68.44;MQ0=3;MQRankSum=-4.741;QD=9.34;ReadPosRankSum=-2.180;VQSLOD=2.1070;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:44.73:0,45,1855	0/0:6,0:6:15.05:0,15,583	0/0:13,0:10:21.79:0,22,309	0/0:7,0:6:15.05:0,15,250	0/1:19,0:19:0.48:0,0,12	0/0:24,0:24:57.18:0,57,3165	0/0:32,0:32:78.26:0,78,4837	1/1:4,8:12:17.10:380,17,0	0/1:8,0:14:44.77:142,0,45	0/0:24,0:24:69.23:0,69,4263	0/0:17,0:17:37.11:0,37,2241	0/0:19,0:19:51.14:0,51,2619	0/0:14,0:14:36.12:0,36,2176	0/0:15,0:15:36.12:0,36,2410	0/0:15,0:15:42.14:0,42,2685	0/0:14,0:14:33.11:0,33,2301	0/0:54,0:53:99:0,135,8942	0/0:38,0:37:96.29:0,96,6293	0/0:22,0:22:60.17:0,60,3030	0/0:9,0:9:21.07:0,21,863	0/0:56,0:56:99:0,129,7606	0/0:12,0:11:21.07:0,21,1243	0/0:9,0:9:17.78:0,18,1062	0/0:38,0:38:99:0,99,6495	0/0:17,0:17:14.67:0,15,569	0/0:24,0:24:66.23:0,66,2718	0/0:9,0:9:24.07:0,24,1018	0/0:7,0:7:18.05:0,18,560
chr10	20169324	.	GCT	G	2104.10	PASS	AB=0.500;AC=17;AF=0.304;AN=56;BaseQRankSum=6.034;DP=562;FS=1.017;HRun=0;HaplotypeScore=112.4268;InbreedingCoeff=0.9120;MQ=64.19;MQ0=3;MQRankSum=-1.683;QD=15.94;ReadPosRankSum=0.253;VQSLOD=3.2033;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:17,8:25:42.02:529,42,0	1/1:7,0:7:14.87:186,15,0	0/0:10,0:7:5.14:0,5,60	0/0:4,0:3:6:0,6,52	0/1:0,17:17:0.03:0,0,0	0/0:23,0:23:54.06:0,54,651	0/0:35,0:35:74.96:0,75,1066	1/1:8,0:8:8.83:40,9,0	1/1:6,8:14:14.93:123,15,0	0/0:26,0:26:65.78:0,66,920	0/0:15,0:15:33.64:0,34,439	0/0:20,0:20:44.56:0,45,554	0/0:16,0:16:36.04:0,36,454	0/0:17,0:17:41.75:0,42,546	0/0:16,0:16:40.49:0,40,389	0/0:13,0:13:33.07:0,33,438	0/0:56,0:55:99:0,131,1855	0/0:37,0:36:89.55:0,90,1355	0/0:16,0:16:48.08:0,48,635	0/0:10,0:10:18.72:0,19,182	0/0:56,0:56:99:0,125,1573	0/0:13,0:12:24.05:0,24,337	0/0:10,0:10:21.03:0,21,287	0/0:37,0:37:86.40:0,86,1319	1/1:0,16:16:14.93:184,15,0	1/1:3,25:28:69.59:758,70,0	1/1:6,4:10:23.99:309,24,0	1/1:4,3:7:14.84:175,15,0
chr10	20169334	.	GCGCGCACACACACACACA	G	385.17	PASS	AB=1.000;AC=4;AF=0.071;AN=56;BaseQRankSum=3.203;DP=585;FS=4.204;HRun=0;HaplotypeScore=256.4290;InbreedingCoeff=0.3629;MQ=58.99;MQ0=7;MQRankSum=-2.382;QD=13.76;ReadPosRankSum=-0.173;VQSLOD=2.2958;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:42.20:0,42,1489	0/1:6,0:6:17.11:17,0,146	0/0:6,0:3:5.05:0,5,19	0/0:3,0:1:3:0,3,29	0/0:22,0:22:11.94:0,12,538	0/0:24,0:23:39.12:0,39,2051	0/0:36,0:36:63.17:0,63,3588	0/1:10,0:9:7.05:7,0,558	1/1:4,8:12:14.58:466,15,0	0/0:25,0:25:72.23:0,72,3448	0/0:15,0:15:29.59:0,30,1851	0/0:21,0:21:35.67:0,36,1811	0/0:17,0:17:23.66:0,24,1246	0/0:22,0:22:42.14:0,42,2776	0/0:17,0:17:36.41:0,36,1610	0/0:13,0:13:27.09:0,27,1520	0/0:58,0:56:99:0,121,7396	0/0:33,0:32:81.19:0,81,4711	0/0:14,0:14:42.07:0,42,1700	0/0:12,0:12:24.55:0,25,1487	0/0:62,0:62:99:0,111,6020	0/0:14,0:13:18.06:0,18,1047	0/0:11,0:11:19.31:0,19,1366	0/0:38,0:38:78.25:0,78,4624	0/0:21,0:21:29.72:0,30,1180	0/0:27,0:27:68.04:0,68,2200	0/0:10,0:10:20.46:0,20,537	0/0:7,0:6:5.70:0,6,243
chr10	20169338	.	G	GCA	4221.87	PASS	AB=0.693;AC=21;AF=0.375;AN=56;BaseQRankSum=-9.338;DP=626;FS=6.164;HRun=0;HaplotypeScore=118.6068;InbreedingCoeff=-0.2268;MQ=58.46;MQ0=7;MQRankSum=2.291;QD=8.94;ReadPosRankSum=2.995;VQSLOD=4.1552;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:29:23.49:0,23,171	0/0:7,0:7:5.37:0,5,31	1/1:9,0:4:2.99:23,3,0	0/0:6,0:2:3:0,3,26	0/0:19,0:22:11.61:0,12,89	0/1:11,11:21:74.82:120,0,75	0/1:14,22:38:64.29:348,0,64	1/1:14,0:13:18.95:122,19,0	0/0:12,0:12:5.99:0,6,28	0/1:13,15:28:17.42:389,0,17	0/1:9,6:17:23.58:124,0,24	0/1:15,11:26:58.52:164,0,59	0/1:10,6:16:34.95:35,0,55	0/1:10,15:27:84.29:288,0,84	0/0:4,0:16:19.68:0,20,97	0/1:6,8:15:15.94:145,0,16	0/1:28,27:56:81.77:714,0,82	0/1:15,16:31:99:414,0,139	1/1:10,7:17:21.46:263,21,0	0/1:14,0:14:37.12:183,0,37	0/1:35,33:73:99:331,0,244	0/1:6,10:15:18.05:126,0,18	0/1:7,4:11:77.37:77,0,88	0/1:20,17:39:99:356,0,131	0/0:11,0:20:31.91:0,32,185	0/0:17,0:25:42.15:0,42,251	0/0:6,0:10:11.56:0,12,76	0/0:4,0:6:8.61:0,9,45
chr10	20170868	.	C	CT	12578.42	PASS	AB=0.556;AC=47;AF=0.839;AN=56;BaseQRankSum=-6.125;DP=593;FS=18.388;HRun=9;HaplotypeScore=62.3531;InbreedingCoeff=0.8310;MQ=62.92;MQ0=0;MQRankSum=-0.703;QD=24.00;ReadPosRankSum=0.797;VQSLOD=3.6514;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,36:38:84.23:929,84,0	1/1:2,11:13:10.04:339,10,0	0/0:9,0:8:13.74:0,14,127	0/0:10,0:9:20.98:0,21,178	1/1:9,24:34:72.19:793,72,0	1/1:0,17:17:51.14:564,51,0	1/1:3,9:12:21.06:232,21,0	1/1:3,29:32:79.08:859,79,0	0/0:25,0:25:56.97:0,57,491	1/1:8,25:33:72.18:786,72,0	1/1:3,15:18:45.12:498,45,0	1/1:2,11:13:27.07:299,27,0	1/1:2,18:20:51.14:564,51,0	1/1:2,20:22:57.15:630,57,0	0/0:25,0:25:56.97:0,57,495	1/1:3,15:18:42.11:465,42,0	0/1:4,16:20:11.76:296,0,12	1/1:2,16:18:7.22:306,7,0	1/1:6,22:28:40.19:651,40,0	1/1:4,14:18:42.11:459,42,0	1/1:5,12:17:27.07:298,27,0	1/1:5,9:14:12.69:251,13,0	1/1:1,15:16:43.67:469,44,0	1/1:1,12:13:36.10:398,36,0	1/1:6,21:27:54.15:597,54,0	1/1:8,22:30:43.11:693,43,0	1/1:7,22:29:31.14:571,31,0	1/1:3,21:24:57.15:630,57,0
chr10	20171336	.	GCC	G	13844.36	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=3.015;DP=577;FS=0.511;HRun=9;HaplotypeScore=94.9291;InbreedingCoeff=0.9604;MQ=82.52;MQ0=2;MQRankSum=-8.499;QD=27.31;ReadPosRankSum=4.975;VQSLOD=4.7902;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,25:29:69.14:788,69,0	1/1:2,4:6:6.02:70,6,0	0/0:21,0:21:56.95:0,57,802	0/0:19,0:19:39.12:0,39,572	1/1:2,15:17:48.14:557,48,0	1/1:3,20:23:54.15:629,54,0	1/1:2,14:16:27.07:315,27,0	1/1:10,15:25:45.07:503,45,0	1/1:3,16:18:54.15:619,54,0	1/1:2,13:15:42.12:488,42,0	1/1:2,19:21:54.16:629,54,0	1/1:2,22:24:63.18:734,63,0	1/1:1,13:14:33.10:385,33,0	1/1:4,21:25:57.03:663,57,0	0/0:30,0:30:81.28:0,81,1324	1/1:2,18:20:51.14:594,51,0	1/1:2,24:27:68.93:781,69,0	1/1:3,15:17:36.10:420,36,0	1/1:4,21:24:63.18:733,63,0	1/1:2,14:16:39.07:439,39,0	1/1:5,22:27:60.17:699,60,0	1/1:3,23:26:57.16:664,57,0	1/1:3,12:15:36.07:406,36,0	1/1:2,20:22:48.13:559,48,0	1/1:4,18:22:38.90:432,39,0	1/1:6,22:27:72.21:839,72,0	1/1:5,16:21:60.16:689,60,0	1/1:0,6:6:18.05:210,18,0
chr10	20171403	.	TGGAC	T	19643.66	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=9.747;DP=565;FS=5.462;HRun=0;HaplotypeScore=201.9794;InbreedingCoeff=0.9732;MQ=75.43;MQ0=0;MQRankSum=-11.870;QD=40.17;ReadPosRankSum=3.613;VQSLOD=4.4508;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,30:33:87.30:1553,87,0	1/1:1,6:7:18.06:324,18,0	0/0:27,0:27:69.67:0,70,1571	0/0:19,0:19:45.15:0,45,1119	1/1:5,17:22:42.14:752,42,0	1/1:6,19:25:57.18:996,57,0	1/1:4,27:31:69.24:1240,69,0	1/1:8,29:37:87.26:1470,87,0	1/1:2,16:18:48.16:862,48,0	1/1:1,18:19:54.19:969,54,0	1/1:1,6:7:12.04:216,12,0	1/1:1,20:21:57.20:1022,57,0	1/1:3,14:17:42.14:754,42,0	1/1:4,10:15:36.12:639,36,0	0/0:30,0:30:84.27:0,84,2115	1/1:1,22:23:66.23:1180,66,0	1/1:5,16:21:45.15:802,45,0	1/1:2,11:11:27.09:485,27,0	1/1:7,9:16:33.11:587,33,0	1/1:3,10:13:27.09:485,27,0	1/1:3,16:19:12.04:214,12,0	1/1:2,19:21:51.17:916,51,0	1/1:0,9:9:21.07:377,21,0	1/1:5,21:24:45.06:790,45,0	1/1:2,18:20:39.13:694,39,0	1/1:7,20:27:57.20:1024,57,0	1/1:1,14:16:42.14:755,42,0	1/1:1,11:12:30.10:539,30,0
chr10	20171424	.	TCTCAGAGAC	T	16103.77	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=13.255;DP=553;FS=9.327;HRun=0;HaplotypeScore=270.7562;InbreedingCoeff=0.9836;MQ=77.90;MQ0=0;MQRankSum=-14.289;QD=56.50;ReadPosRankSum=2.294;VQSLOD=3.4226;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:96.33:0,96,4617	0/0:8,0:8:21.07:0,21,1029	0/0:27,0:27:78.27:0,78,3414	0/0:13,0:13:39.12:0,39,1484	0/0:18,0:18:45.15:0,45,2201	1/1:4,16:20:42.14:1279,42,0	1/1:9,19:28:54.19:1608,54,0	0/0:30,0:30:81.23:0,81,3199	0/0:19,0:19:57.20:0,57,2744	1/1:4,14:18:42.14:1302,42,0	1/1:2,5:7:9.42:134,9,0	1/1:4,15:19:42.14:1281,42,0	1/1:1,16:16:42.14:1303,42,0	1/1:1,11:12:30.10:911,30,0	0/0:34,0:34:99:0,102,4704	1/1:5,19:24:54.19:1637,54,0	1/1:7,15:22:45.15:1375,45,0	1/1:1,12:12:30.10:931,30,0	1/1:1,13:14:39.13:1210,39,0	1/1:1,11:12:24.08:744,24,0	1/1:11,7:18:9.97:240,10,0	1/1:6,17:23:36.04:947,36,0	1/1:4,12:16:17.98:385,18,0	1/1:2,20:20:30.07:818,30,0	0/0:21,0:21:45.15:0,45,2145	0/0:26,0:26:75.26:0,75,3415	0/0:20,0:20:54.19:0,54,2595	0/0:14,0:14:39.13:0,39,1847
chr10	20171773	.	C	CCT	510.66	PASS	AB=0.979;AC=53;AF=0.946;AN=56;BaseQRankSum=-0.850;DP=339;FS=2.276;HRun=0;HaplotypeScore=126.6819;InbreedingCoeff=0.1590;MQ=79.38;MQ0=0;MQRankSum=-0.923;QD=1.51;ReadPosRankSum=3.333;VQSLOD=2.0606;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:34,0:33:11.58:32,12,0	1/1:4,0:4:1.41:4,1,0	1/1:12,3:15:22.17:188,22,0	0/1:14,1:15:12.43:77,0,12	1/1:5,0:5:1.41:4,1,0	1/1:11,0:11:3.56:11,4,0	1/1:23,0:23:9.03:26,9,0	1/1:23,0:23:11.74:32,12,0	1/1:8,0:8:3.77:11,4,0	1/1:9,0:9:2.04:7,2,0	1/1:7,0:7:2.36:6,2,0	1/1:12,0:12:5.98:21,6,0	1/1:11,0:11:7.49:20,7,0	0/1:11,0:11:6.09:6,0,16	1/1:8,0:8:2.36:7,2,0	1/1:9,0:9:3.30:9,3,0	1/1:22,0:22:9.02:24,9,0	1/1:14,0:14:8.02:22,8,0	0/1:13,0:13:4.47:4,0,17	1/1:6,0:6:1.89:5,2,0	1/1:17,0:17:3.90:15,4,0	1/1:9,0:9:0.01:3,0,0	1/1:5,0:5:3.58:10,4,0	1/1:9,0:9:3.38:8,3,0	1/1:9,0:9:4.18:11,4,0	1/1:16,0:16:11.40:31,11,0	1/1:11,0:11:5.49:15,5,0	1/1:3,0:3:0.94:3,1,0
chr10	20173393	.	AT	A	17662.85	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-0.310;DP=719;FS=1.551;HRun=6;HaplotypeScore=79.3945;InbreedingCoeff=0.9962;MQ=80.45;MQ0=0;MQRankSum=-8.096;QD=27.86;ReadPosRankSum=6.472;VQSLOD=4.7760;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,35:36:96.24:1031,96,0	1/1:2,16:18:45.11:484,45,0	0/0:25,0:23:39.10:0,39,593	0/0:33,0:33:77.17:0,77,972	1/1:2,26:28:75.18:804,75,0	1/1:1,25:26:72.18:774,72,0	1/1:3,25:28:66.17:709,66,0	1/1:3,25:28:75.16:789,75,0	1/1:2,21:23:63.16:677,63,0	1/1:2,31:33:90.20:958,90,0	1/1:0,12:12:30.07:318,30,0	1/1:0,23:23:66.17:709,66,0	1/1:1,24:25:57.13:605,57,0	1/1:0,34:34:87.14:935,87,0	0/0:27,0:27:75.23:0,75,972	1/1:1,21:22:60.15:645,60,0	1/1:2,34:36:93.23:999,93,0	1/1:3,12:15:17.04:358,17,0	1/1:1,20:21:57.14:612,57,0	1/1:3,30:33:81.19:868,81,0	1/1:1,25:26:75.19:806,75,0	1/1:1,25:26:63.16:677,63,0	1/1:1,19:20:51.02:531,51,0	1/1:0,32:32:84.21:903,84,0	1/1:1,22:23:60.15:645,60,0	1/1:3,20:23:48.07:503,48,0	1/1:0,24:24:66.17:709,66,0	1/1:0,19:19:57.14:612,57,0
chr10	20175462	.	G	GTACA	1964.71	PASS	AB=0.640;AC=4;AF=0.077;AN=52;BaseQRankSum=-1.603;DP=813;FS=2.713;HRun=0;HaplotypeScore=132.3412;InbreedingCoeff=0.6276;MQ=59.58;MQ0=15;MQRankSum=-1.707;QD=12.36;ReadPosRankSum=-4.452;VQSLOD=2.4790;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:41.18:0,41,839	0/0:10,0:10:21.05:0,21,298	./.	./.	0/0:17,0:17:30.08:0,30,442	0/0:22,0:22:44.37:0,44,582	0/0:22,0:22:27.03:0,27,366	1/1:74,0:74:54.59:398,55,0	0/0:29,0:29:45.15:0,45,697	0/0:42,0:43:75.18:0,75,1073	0/0:23,0:23:42.13:0,42,628	0/0:26,0:26:42.14:0,42,651	0/1:21,20:43:3.98:806,0,4	0/0:32,0:32:45.15:0,45,697	0/1:16,23:42:4.35:875,0,4	0/0:33,0:33:51:0,51,684	0/0:18,0:20:33.11:0,33,493	0/0:26,0:27:12.52:0,13,566	0/0:20,0:19:19.31:0,19,295	0/0:16,0:16:15.05:0,15,232	0/0:55,0:57:99:0,102,1489	0/0:17,0:17:14.11:0,14,402	0/0:24,0:24:30.06:0,30,432	0/0:27,0:27:63.21:0,63,964	0/0:28,0:28:54.18:0,54,832	0/0:31,0:31:54.17:0,54,800	0/0:30,0:30:51.16:0,51,768	0/0:20,0:17:26.34:0,26,407
chr10	20176419	.	C	CA	35.99	PASS	AB=0.878;AC=7;AF=0.125;AN=56;BaseQRankSum=7.699;DP=842;FS=67.557;HRun=0;HaplotypeScore=191.4619;InbreedingCoeff=-0.1389;MQ=68.74;MQ0=1;MQRankSum=-7.542;QD=0.27;ReadPosRankSum=-2.549;VQSLOD=-0.2226;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,2:48:50.21:0,50,1551	0/1:8,4:13:28.60:29,0,304	0/0:26,0:24:62.81:0,63,747	0/0:25,0:24:44.35:0,44,665	0/0:28,1:29:48.13:0,48,651	0/0:22,0:22:57.16:0,57,731	0/0:27,1:28:54.33:0,54,851	0/0:21,1:22:9.83:0,10,675	0/0:49,1:47:99:0,102,1610	0/1:30,1:31:24.02:24,0,727	0/0:11,2:13:27.01:0,27,327	0/0:23,1:23:47.90:0,48,659	0/0:27,0:26:42.31:0,42,646	0/0:34,0:34:62.97:0,63,878	0/0:35,0:35:99:0,102,1309	0/0:22,0:21:50.68:0,51,593	0/0:39,0:39:99:0,112,1352	0/0:35,0:35:77.50:0,78,1115	0/1:13,1:14:12.38:12,0,368	0/1:14,2:16:56.88:57,0,347	0/0:73,2:75:99:0,159,1846	0/0:24,2:26:48.44:0,48,599	0/1:14,1:14:7.17:7,0,311	0/0:45,1:45:99:0,112,1356	0/0:41,0:44:76.66:0,77,1299	0/1:29,1:28:14.61:15,0,758	0/0:25,2:28:31.98:0,32,798	0/1:9,1:9:18.65:19,0,269
chr10	20176542	.	CACAA	C	10750.80	PASS	AB=0.937;AC=34;AF=0.607;AN=56;BaseQRankSum=-2.587;DP=1650;FS=31.529;HRun=0;HaplotypeScore=462.4991;InbreedingCoeff=-0.5006;MQ=40.55;MQ0=43;MQRankSum=-2.986;QD=6.66;ReadPosRankSum=-9.981;VQSLOD=0.5919;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:92,3:76:99:269,0,154	0/1:25,1:22:5.17:233,0,5	0/1:50,0:29:25.93:26,0,388	0/1:52,0:22:57.40:57,0,270	0/1:49,5:51:64.78:261,0,65	0/1:36,4:37:21.13:354,0,21	0/1:87,8:86:56.25:672,0,56	0/1:98,3:86:99:900,0,342	0/1:80,1:66:99:266,0,311	1/1:90,3:72:6.28:928,6,0	0/1:29,3:31:14.48:207,0,14	0/1:69,6:68:49.24:427,0,49	0/1:47,6:45:5.91:601,0,6	0/1:59,5:59:25.50:500,0,26	0/0:35,0:35:90.25:0,90,2004	0/1:41,2:32:35.84:312,0,36	1/1:37,2:36:45.51:405,46,0	0/1:48,0:38:97.68:342,0,98	1/1:40,2:29:22.90:412,23,0	1/1:43,3:42:30.93:487,31,0	1/1:158,6:140:30.29:575,30,0	1/1:40,5:44:2.43:396,2,0	0/1:27,1:26:17.43:119,0,17	1/1:53,3:49:20.80:161,21,0	0/1:50,4:54:99:372,0,118	0/1:79,6:74:99:951,0,112	0/1:36,5:37:99:401,0,130	0/1:8,4:12:39.20:119,0,39
chr10	20176544	.	CAA	C	12580.93	PASS	AB=0.984;AC=48;AF=0.857;AN=56;BaseQRankSum=-2.409;DP=1686;FS=25.644;HRun=3;HaplotypeScore=432.1411;InbreedingCoeff=0.0873;MQ=41.25;MQ0=43;MQRankSum=-1.029;QD=7.62;ReadPosRankSum=-8.435;VQSLOD=-0.2101;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:91,2:71:32.51:523,33,0	1/1:29,1:25:40.84:326,41,0	0/1:50,0:29:32.93:33,0,252	0/1:50,0:22:59.72:60,0,162	0/1:54,1:51:5.05:316,0,5	1/1:41,1:38:28.46:316,28,0	1/1:92,0:83:71.69:654,72,0	0/1:106,0:91:83.47:1150,0,83	0/1:75,5:65:32.25:295,0,32	1/1:98,1:79:99:1149,130,0	1/1:32,0:31:37.03:290,37,0	1/1:77,0:71:7.61:363,8,0	1/1:52,0:45:22.82:472,23,0	1/1:67,1:62:19.62:422,20,0	0/0:35,0:35:90.08:0,90,1456	1/1:48,0:37:2.17:303,2,0	1/1:39,0:37:52.79:349,53,0	1/1:49,0:39:7.04:450,7,0	1/1:44,0:30:63.66:554,64,0	1/1:46,0:42:61.63:459,62,0	1/1:160,0:136:99:770,104,0	1/1:44,0:44:53.59:424,54,0	0/1:31,0:29:12.59:140,0,13	1/1:54,1:49:22.56:189,23,0	1/1:58,0:56:31.04:552,31,0	1/1:94,1:82:99:1391,115,0	1/1:42,0:38:7.81:393,8,0	1/1:13,0:13:7.37:239,7,0
chr10	20176609	.	GCA	G	633.87	PASS	AB=0.972;AC=21;AF=0.389;AN=54;BaseQRankSum=2.172;DP=1506;FS=1.389;HRun=0;HaplotypeScore=340.3087;InbreedingCoeff=-0.3091;MQ=41.81;MQ0=69;MQRankSum=-0.192;QD=0.59;ReadPosRankSum=-1.119;VQSLOD=1.3562;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:80,0:67:30.41:30,0,136	0/0:13,0:12:7.54:0,8,71	./.	0/1:52,0:14:2.17:2,0,9	0/1:36,0:35:7.88:8,0,96	0/1:49,1:45:15.11:15,0,206	0/1:100,2:88:51.76:52,0,389	1/1:58,0:33:1.09:11,1,0	0/0:56,0:51:17.88:0,18,153	0/0:66,0:57:1.78:0,2,255	0/0:21,0:19:6.02:0,6,90	0/1:57,2:49:64.96:65,0,156	0/1:48,3:44:76.78:77,0,129	0/1:51,2:49:33.22:33,0,364	0/0:27,3:31:5.61:0,6,415	1/1:35,1:28:3.83:44,4,0	0/1:48,2:47:62.81:63,0,349	0/1:58,2:55:30.08:30,0,473	0/0:31,0:21:3.01:0,3,43	0/0:42,0:39:7.31:0,7,282	0/1:138,3:127:99:141,0,573	0/0:44,0:42:4.06:0,4,265	0/1:33,2:33:54.17:54,0,73	0/1:74,5:76:99:107,0,509	0/1:64,0:55:2.42:2,0,209	0/0:71,0:56:16.17:0,16,265	0/1:44,0:39:21.06:21,0,162	1/1:18,0:18:4.68:26,5,0
chr10	20178948	.	T	TA	5629.94	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-13.484;DP=693;FS=0.327;HRun=8;HaplotypeScore=62.5999;InbreedingCoeff=0.9946;MQ=70.56;MQ0=0;MQRankSum=-3.148;QD=27.46;ReadPosRankSum=2.565;VQSLOD=5.4809;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,31:36:56.78:907,57,0	1/1:3,12:15:33.10:381,33,0	0/0:15,0:14:29.73:0,30,270	0/0:9,0:8:12:0,12,109	1/1:2,22:24:66.15:747,66,0	0/0:11,0:11:33.02:0,33,302	0/0:15,0:15:42.02:0,42,384	0/0:40,0:40:99:0,111,1012	1/1:4,26:30:72.21:829,72,0	0/0:38,0:38:99:0,99,898	0/0:23,0:23:63.01:0,63,566	0/0:24,0:24:66.03:0,66,604	0/0:29,0:29:84.01:0,84,759	0/0:22,0:22:60.03:0,60,549	0/0:35,0:36:99:0,101,912	0/0:21,0:21:60.02:0,60,544	0/0:30,0:30:89.97:0,90,803	0/0:28,0:28:78.03:0,78,714	0/0:27,0:27:63.02:0,63,576	0/0:23,0:23:66.03:0,66,604	0/0:21,0:21:53.98:0,54,483	0/0:25,0:25:69.04:0,69,631	0/0:25,0:25:72.03:0,72,656	0/0:26,0:26:72.02:0,72,654	1/1:1,25:26:63.19:727,63,0	1/1:4,31:35:65.76:981,66,0	1/1:2,19:21:51.10:574,51,0	1/1:3,14:17:42.12:485,42,0
chr10	20179089	.	G	GTCCA	6169.46	PASS	AB=0.550;AC=12;AF=0.214;AN=56;BaseQRankSum=-7.238;DP=804;FS=27.046;HRun=0;HaplotypeScore=118.4864;InbreedingCoeff=0.7206;MQ=58.51;MQ0=25;MQRankSum=1.084;QD=39.80;ReadPosRankSum=0.792;VQSLOD=3.1932;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:38,13:51:83.45:2093,83,0	1/1:2,4:7:5.69:95,6,0	0/0:43,0:10:3.01:0,3,34	0/0:40,0:17:12.01:0,12,189	1/1:3,18:21:48.16:973,48,0	0/0:24,0:24:54.17:0,54,850	0/0:31,0:31:60.20:0,60,952	0/0:29,0:29:51.15:0,51,772	0/0:29,0:29:60.15:0,60,891	0/0:21,0:21:54.17:0,54,836	0/0:28,0:28:57.19:0,57,874	0/0:28,0:28:69.24:0,69,1121	0/0:34,0:34:90.27:0,90,1401	0/0:35,0:35:75.26:0,75,1208	0/0:37,0:38:99:0,99,1536	0/0:23,0:23:57.15:0,57,839	0/0:34,0:34:90.31:0,90,1450	0/0:43,0:43:83.24:0,83,1521	0/0:21,0:20:48.16:0,48,760	0/0:24,0:24:36.12:0,36,575	0/0:41,0:40:81.25:0,81,1286	0/0:23,0:23:57.13:0,57,823	0/0:24,0:24:48.16:0,48,776	0/0:35,0:35:87.28:0,87,1366	0/1:2,15:17:21.89:557,0,22	0/1:7,22:28:25.74:1378,0,26	1/1:8,16:25:33.11:782,33,0	1/1:1,4:5:12.04:292,12,0
chr10	20179521	.	C	CACAA	818.52	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-5.616;DP=641;FS=2.174;HRun=0;HaplotypeScore=118.1157;InbreedingCoeff=0.7675;MQ=70.03;MQ0=1;MQRankSum=-1.801;QD=24.80;ReadPosRankSum=-3.609;VQSLOD=2.7375;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:51:80.76:0,81,1278	0/0:5,0:5:5.90:0,6,98	0/0:35,0:30:48.15:0,48,717	0/0:22,0:17:17.65:0,18,243	0/0:28,0:28:48.16:0,48,775	0/0:27,0:27:60.19:0,60,947	0/0:25,0:25:39.12:0,39,601	1/1:19,14:31:45.15:913,45,0	0/0:27,0:27:27.09:0,27,439	0/0:34,0:35:75.22:0,75,1134	0/0:17,0:17:33.11:0,33,532	0/0:16,0:16:21.07:0,21,337	0/0:20,0:20:27.09:0,27,434	0/0:32,0:32:54.18:0,54,873	0/0:24,0:24:39.13:0,39,624	0/0:26,0:26:51.17:0,51,825	0/0:17,0:17:39.13:0,39,629	0/0:24,0:24:45.62:0,46,728	0/0:24,0:25:31.20:0,31,603	0/0:16,0:16:39.13:0,39,630	0/0:31,0:31:57.19:0,57,927	0/0:17,0:17:36.12:0,36,580	0/0:14,0:13:21.07:0,21,342	0/0:20,0:20:39.11:0,39,594	0/0:10,0:10:18.04:0,18,267	0/0:21,0:21:39.13:0,39,630	0/0:18,0:18:9.02:0,9,146	0/0:5,0:5:6.02:0,6,98
chr10	20179556	.	T	TA	8222.10	PASS	AB=0.568;AC=46;AF=0.821;AN=56;BaseQRankSum=-3.468;DP=617;FS=8.409;HRun=11;HaplotypeScore=73.4048;InbreedingCoeff=0.7106;MQ=67.01;MQ0=2;MQRankSum=-0.581;QD=15.46;ReadPosRankSum=5.553;VQSLOD=5.0873;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,1:46:76.70:385,77,0	1/1:0,0:5:11.49:62,11,0	0/0:29,0:22:18.25:0,18,173	0/0:13,0:12:24.33:0,24,178	1/1:6,0:30:52.83:269,53,0	1/1:3,20:24:56.95:562,57,0	1/1:2,18:21:30.70:478,31,0	0/0:28,0:26:34.81:0,35,416	1/1:2,0:27:46.44:254,46,0	1/1:11,26:38:42.18:603,42,0	1/1:4,14:19:0.93:316,1,0	0/1:5,11:16:20.61:159,0,21	1/1:2,14:16:9.57:281,10,0	1/1:8,20:28:71.92:706,72,0	0/0:12,0:13:25.92:0,26,192	1/1:9,15:24:33.84:510,34,0	1/1:3,13:16:33.07:335,33,0	1/1:3,26:29:53.85:548,54,0	1/1:9,14:22:39.04:379,39,0	1/1:9,17:27:26.71:414,27,0	1/1:5,12:19:18.51:340,19,0	1/1:5,17:23:41.92:409,42,0	1/1:5,7:12:29.85:273,30,0	0/1:3,16:19:5.48:269,0,5	1/1:2,2:19:34.42:203,34,0	1/1:5,4:19:38.10:252,38,0	1/1:4,0:18:20.05:116,20,0	1/1:0,1:12:17.21:99,17,0
chr10	20180372	.	T	TA	8376.20	PASS	AB=0.647;AC=31;AF=0.554;AN=56;BaseQRankSum=-12.421;DP=649;FS=1.920;HRun=9;HaplotypeScore=62.9407;InbreedingCoeff=0.8991;MQ=77.92;MQ0=2;MQRankSum=-0.172;QD=22.89;ReadPosRankSum=2.122;VQSLOD=5.8117;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:29.97:0,30,297	0/0:20,0:20:53.97:0,54,467	0/0:18,0:14:14.98:0,15,130	0/0:28,0:25:5.62:0,6,138	0/0:25,0:25:62.98:0,63,547	1/1:4,19:24:53.98:578,54,0	1/1:2,8:10:21.06:232,21,0	0/0:36,0:36:77.68:0,78,671	0/0:19,0:19:53.99:0,54,469	1/1:9,32:42:96.09:1043,96,0	1/1:2,20:23:30.94:552,31,0	1/1:5,25:30:31.10:571,31,0	1/1:3,26:29:63.17:697,63,0	1/1:4,11:15:24.06:265,24,0	0/0:25,0:25:56.97:0,57,495	1/1:3,21:24:60.16:662,60,0	1/1:4,11:15:24.06:265,24,0	1/1:1,13:14:27.07:299,27,0	1/1:1,19:19:57.11:617,57,0	1/1:5,28:33:84.19:914,84,0	1/1:4,13:17:7.05:306,7,0	1/1:3,20:23:54.15:597,54,0	0/1:10,12:22:12.12:325,0,12	1/1:5,19:25:21.91:453,22,0	0/0:21,0:21:53.97:0,54,469	0/0:37,1:38:65.78:0,66,800	0/0:24,0:25:65:0,65,549	0/0:8,0:8:18:0,18,156
chr10	20182798	.	TTCTC	T	6817.07	PASS	AB=0.594;AC=45;AF=0.804;AN=56;BaseQRankSum=0.124;DP=593;FS=1.708;HRun=0;HaplotypeScore=109.6567;InbreedingCoeff=0.7298;MQ=75.76;MQ0=6;MQRankSum=-0.579;QD=16.35;ReadPosRankSum=3.182;VQSLOD=4.7703;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:19,2:22:38.92:562,39,0	1/1:7,0:7:15.05:249,15,0	0/0:31,0:24:33.10:0,33,689	0/0:51,0:38:51.06:0,51,980	1/1:6,10:16:14.81:98,15,0	1/1:15,2:18:20.87:233,21,0	1/1:6,17:24:11.71:118,12,0	0/0:32,0:32:62:0,62,906	0/0:39,0:39:60.11:0,60,831	1/1:13,2:15:30.10:499,30,0	1/1:4,3:7:11.92:135,12,0	1/1:11,2:14:36.11:543,36,0	1/1:11,0:11:18.06:300,18,0	1/1:12,1:13:27.02:367,27,0	0/0:23,0:23:53.76:0,54,1135	0/1:12,26:38:27.81:231,0,28	1/1:10,20:30:9.03:139,9,0	1/1:19,1:20:45.08:679,45,0	1/1:12,3:15:15.04:224,15,0	1/1:9,0:9:6:75,6,0	1/1:14,28:42:2.82:50,3,0	1/1:9,2:11:24.03:338,24,0	1/1:8,1:9:17.76:149,18,0	1/1:10,23:33:2.99:50,3,0	1/1:8,0:9:11.93:163,12,0	1/1:9,16:25:48.13:749,48,0	1/1:22,0:22:51.17:817,51,0	1/1:2,0:7:3.01:50,3,0
chr10	20182817	.	TCTC	T	1785.65	PASS	AB=0.931;AC=32;AF=0.571;AN=56;BaseQRankSum=3.635;DP=602;FS=14.984;HRun=0;HaplotypeScore=140.6493;InbreedingCoeff=-0.0926;MQ=53.05;MQ0=18;MQRankSum=2.006;QD=3.87;ReadPosRankSum=3.894;VQSLOD=1.7213;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:30,3:32:99:152,0,122	0/1:6,1:7:17.82:54,0,18	0/0:18,0:12:36.11:0,36,736	0/0:29,0:19:42.89:0,43,1055	0/1:14,0:14:54.85:55,0,56	0/1:27,2:28:17.34:117,0,17	1/1:23,0:22:11.61:65,12,0	0/0:29,0:29:81.57:0,82,1459	0/0:37,0:37:59.59:0,60,1058	0/1:16,1:15:36.08:104,0,36	1/1:12,0:13:11.49:64,11,0	1/1:22,0:23:12.01:198,12,0	0/1:12,0:11:18.97:64,0,19	0/1:15,1:18:4.93:141,0,5	0/0:27,0:27:62.53:0,63,1311	0/1:35,0:36:68.25:68,0,83	1/1:25,0:24:3.93:27,4,0	1/1:14,2:17:10.20:198,10,0	0/1:19,0:17:38.01:38,0,242	0/1:4,1:4:23.26:44,0,23	1/1:35,0:34:3.82:17,4,0	1/1:11,1:12:7.15:101,7,0	1/1:11,0:14:2.44:77,2,0	1/1:32,0:30:3.01:15,3,0	0/1:13,1:14:32.91:33,0,73	0/1:29,0:29:99:149,0,309	0/1:23,2:25:99:172,0,108	0/1:7,1:8:5.56:6,0,55
chr10	20182819	.	TCTTTGTGTGTGTGTG	T	1541.75	PASS	AB=0.972;AC=23;AF=0.411;AN=56;BaseQRankSum=6.164;DP=594;FS=0.878;HRun=0;HaplotypeScore=227.0713;InbreedingCoeff=-0.0060;MQ=51.75;MQ0=18;MQRankSum=1.703;QD=3.68;ReadPosRankSum=4.413;VQSLOD=2.2046;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:31:14.74:0,15,891	0/0:7,0:7:3.84:0,4,222	0/0:16,0:10:30.06:0,30,572	0/0:27,0:17:43.61:0,44,750	0/0:14,0:14:12.25:0,12,257	0/1:29,0:28:27.73:28,0,38	1/1:23,0:22:3.63:23,4,0	0/0:28,0:28:77.92:0,78,1189	0/1:36,0:36:23:23,0,766	1/1:18,0:16:15.18:252,15,0	0/1:13,0:14:12.06:19,0,12	0/1:22,1:23:21.75:315,0,22	0/1:13,0:12:49.51:71,0,50	1/1:15,2:17:16.77:200,17,0	0/0:27,0:27:64.25:0,64,2568	0/1:35,1:36:93.29:193,0,93	1/1:25,0:24:9.88:119,10,0	0/1:14,1:15:4.82:240,0,5	0/1:18,0:16:99:118,0,207	0/1:4,0:3:1.40:1,0,16	0/1:36,0:34:0.31:4,0,0	0/1:11,0:11:10.93:41,0,11	0/1:10,3:13:1.05:1,0,5	0/1:32,0:30:0.79:3,0,1	0/0:15,0:15:18.37:0,18,565	0/1:29,0:29:19.03:19,0,948	0/1:26,0:25:34.24:34,0,451	0/0:9,0:9:2.24:0,2,172
chr10	20182820	.	CTTTGTGTGTGTGTG	C	1497.32	PASS	AB=0.983;AC=15;AF=0.268;AN=56;BaseQRankSum=5.648;DP=591;FS=4.186;HRun=0;HaplotypeScore=218.4102;InbreedingCoeff=0.0193;MQ=51.51;MQ0=19;MQRankSum=-2.053;QD=5.83;ReadPosRankSum=4.054;VQSLOD=2.5050;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:37.86:0,38,747	0/0:7,0:7:14.56:0,15,192	0/0:13,0:9:26.67:0,27,216	0/0:26,0:16:5.03:0,5,138	0/0:15,0:14:12.76:0,13,234	0/0:17,10:26:0.10:0,0,24	0/1:22,1:22:0.07:14,0,0	0/0:28,0:28:40.12:0,40,237	0/1:35,0:35:76.87:77,0,165	0/1:18,1:17:7.63:265,0,8	0/0:14,0:14:4.58:0,5,13	0/1:21,1:22:17.22:311,0,17	0/1:13,0:12:26.17:71,0,26	1/1:16,0:16:9.76:184,10,0	0/0:27,0:27:54.44:0,54,1993	0/1:34,2:36:18.52:187,0,19	0/1:26,0:25:6.77:152,0,7	0/1:15,0:15:18.37:172,0,18	0/1:19,0:17:99:166,0,108	0/0:4,0:3:1.72:0,2,4	0/0:37,0:34:8.05:0,8,33	1/1:11,0:11:3.27:35,3,0	0/1:13,0:13:3.19:7,0,3	0/0:32,1:31:3.90:0,4,10	0/0:16,0:16:29.20:0,29,517	0/0:29,0:29:5.49:0,5,749	0/0:27,0:25:35.73:0,36,398	0/1:9,0:9:7.76:8,0,121
chr10	20182822	.	TTGTGTGTGTGTG	T	2242.20	PASS	AB=0.917;AC=34;AF=0.680;AN=50;BaseQRankSum=2.241;DP=580;FS=17.324;HRun=0;HaplotypeScore=196.2223;InbreedingCoeff=0.5646;MQ=50.92;MQ0=22;MQRankSum=-6.620;QD=6.04;ReadPosRankSum=-2.400;VQSLOD=0.5978;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:30:45.45:0,45,751	0/0:7,0:7:12.04:0,12,186	./.	./.	0/0:15,0:14:9.03:0,9,191	1/1:24,1:26:8.73:53,9,0	1/1:23,1:23:2.42:10,2,0	./.	1/1:30,3:34:0.59:199,1,0	1/1:12,6:17:15.05:353,15,0	1/1:5,8:13:14.51:77,15,0	1/1:14,6:21:1.05:346,1,0	1/1:9,3:12:6.42:103,6,0	1/1:11,1:17:15.76:203,16,0	0/0:28,0:28:34.92:0,35,1455	1/1:32,2:36:0.02:232,0,0	1/1:26,1:25:5.83:182,6,0	1/1:12,0:14:7.01:181,7,0	1/1:14,5:17:12.01:263,12,0	0/1:3,1:4:13.94:14,0,109	1/1:37,0:34:4.44:21,4,0	1/1:7,2:9:8.29:47,8,0	1/1:8,4:13:11.32:69,11,0	1/1:31,2:31:8.58:55,9,0	0/0:15,0:16:27.09:0,27,500	0/0:29,0:30:44.92:0,45,713	0/0:22,0:22:18.49:0,18,322	0/1:8,0:9:7.59:8,0,119
chr10	20184807	.	GA	G	6451.17	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=6.570;DP=745;FS=0.652;HRun=3;HaplotypeScore=105.6430;InbreedingCoeff=0.9998;MQ=86.27;MQ0=0;MQRankSum=-0.799;QD=34.87;ReadPosRankSum=2.215;VQSLOD=4.7412;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,56:57:99:2045,166,0	1/1:0,14:14:42.13:520,42,0	0/0:26,0:26:63.04:0,63,827	0/0:22,0:22:56.61:0,57,815	1/1:1,19:20:48.15:595,48,0	0/0:20,0:19:60.20:0,60,864	0/0:25,0:25:72.24:0,72,1029	0/0:41,0:41:99:0,120,1666	0/0:22,0:22:66.20:0,66,930	0/0:38,0:38:99:0,111,1579	0/0:20,0:20:57.19:0,57,821	0/0:38,0:38:99:0,114,1598	0/0:19,0:19:57.19:0,57,812	0/0:34,0:34:99:0,102,1457	0/0:39,0:39:99:0,111,1582	0/0:26,0:26:78.23:0,78,1081	0/0:29,0:29:81.22:0,81,1104	0/0:21,0:20:63.21:0,63,907	0/0:25,0:25:72.24:0,72,1031	0/0:12,0:12:36.11:0,36,500	0/0:25,0:25:69.23:0,69,993	0/0:20,0:20:54.16:0,54,742	0/0:15,0:15:42.14:0,42,605	0/0:43,0:43:99:0,129,1823	1/1:1,22:23:63.20:781,63,0	1/1:0,34:34:99:1250,102,0	1/1:1,27:28:75.24:928,75,0	1/1:0,9:9:27.08:332,27,0
chr10	20186143	.	GA	G	3757.95	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=16.368;DP=562;FS=0.000;HRun=8;HaplotypeScore=69.9889;InbreedingCoeff=0.9980;MQ=78.26;MQ0=0;MQRankSum=-1.628;QD=24.56;ReadPosRankSum=1.185;VQSLOD=4.3405;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,16:20:38.89:376,39,0	1/1:0,14:14:42.07:406,42,0	0/0:19,0:19:32.99:0,33,343	0/0:9,0:9:18.06:0,18,218	1/1:1,26:27:72.11:695,72,0	0/0:25,0:25:69.21:0,69,834	0/0:13,0:13:39.09:0,39,456	0/0:24,1:25:37.22:0,37,732	0/0:19,0:19:51.16:0,51,616	0/0:25,0:25:69.21:0,69,831	0/0:27,0:27:72.22:0,72,870	0/0:18,0:18:51.16:0,51,616	0/0:18,0:18:51.14:0,51,604	0/0:10,0:10:27.08:0,27,326	0/0:23,0:23:66.20:0,66,797	0/0:19,0:19:51.16:0,51,616	0/0:20,0:20:57.17:0,57,689	0/0:17,0:17:42.13:0,42,507	0/0:15,0:15:42.13:0,42,507	0/0:24,0:24:66.20:0,66,797	0/0:28,0:28:81.19:0,81,951	0/0:25,0:25:69.19:0,69,819	0/0:21,0:21:63.18:0,63,751	0/0:9,0:9:27.08:0,27,326	1/1:3,15:18:42.07:405,42,0	1/1:4,30:34:53.90:804,54,0	1/1:1,25:26:72.12:695,72,0	1/1:0,14:14:39.06:377,39,0
chr10	20186257	.	CT	C	5642.12	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=13.147;DP=646;FS=4.577;HRun=3;HaplotypeScore=62.1936;InbreedingCoeff=0.9970;MQ=78.89;MQ0=0;MQRankSum=-2.161;QD=34.83;ReadPosRankSum=0.967;VQSLOD=5.4785;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,33:34:99:1215,99,0	1/1:0,6:6:15.05:186,15,0	0/0:27,0:26:63.13:0,63,841	0/0:13,0:13:35.84:0,36,436	1/1:0,25:25:75.24:930,75,0	0/0:30,0:30:90.29:0,90,1276	0/0:13,0:13:39.13:0,39,561	0/0:28,0:27:69.22:0,69,961	0/0:20,0:20:60.20:0,60,863	0/0:31,0:31:84.27:0,84,1166	0/0:21,0:21:60.20:0,60,864	0/0:20,0:20:60.20:0,60,864	0/0:25,0:25:75.23:0,75,1057	0/0:16,0:16:48.16:0,48,691	0/0:19,0:19:57.19:0,57,820	0/0:18,0:18:48.15:0,48,672	0/0:30,0:30:87.29:0,87,1245	0/0:25,0:25:69.21:0,69,973	0/0:18,0:18:51.16:0,51,717	0/0:28,0:28:84.28:0,84,1210	0/0:23,0:23:69.23:0,69,992	0/0:25,0:25:75.25:0,75,1078	0/0:35,0:35:99:0,105,1508	0/0:19,0:19:57.19:0,57,821	1/1:0,22:22:60.19:744,60,0	1/1:4,31:35:93.26:1118,93,0	1/1:1,29:30:87.27:1078,87,0	1/1:0,10:10:30.09:372,30,0
chr10	20188091	.	G	GGAA	3611.68	PASS	AB=0.600;AC=13;AF=0.232;AN=56;BaseQRankSum=8.574;DP=608;FS=6.122;HRun=0;HaplotypeScore=91.1826;InbreedingCoeff=0.8590;MQ=57.70;MQ0=6;MQRankSum=0.128;QD=29.60;ReadPosRankSum=1.386;VQSLOD=3.8175;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,33:40:57.07:1054,57,0	1/1:2,6:7:5.22:81,5,0	0/0:24,0:16:20.87:0,21,274	0/0:18,0:11:11.92:0,12,214	1/1:4,18:21:50.91:770,51,0	0/0:18,0:16:36.08:0,36,489	0/0:25,0:24:48.10:0,48,641	0/0:20,0:18:39.02:0,39,458	0/0:32,0:31:69.05:0,69,921	0/0:21,0:21:57.15:0,57,753	0/0:9,0:9:24.03:0,24,311	0/0:32,0:31:74.85:0,75,978	0/0:23,0:22:51.01:0,51,658	0/0:20,0:20:51.13:0,51,688	0/0:25,0:24:60.14:0,60,788	0/0:24,0:24:63.05:0,63,830	0/0:34,0:34:68.11:0,68,992	0/0:30,0:28:32.22:0,32,856	0/0:12,0:7:17.96:0,18,197	0/0:17,0:17:39.09:0,39,509	0/0:34,0:32:81.17:0,81,1059	0/0:11,0:11:30.06:0,30,401	0/0:10,0:10:30.09:0,30,423	0/0:47,0:46:91.13:0,91,1220	1/1:0,9:9:9.03:186,9,0	1/1:5,13:17:36.05:663,36,0	0/1:6,12:18:11.08:546,0,11	1/1:1,5:6:15.05:311,15,0
chr10	20188193	.	AGAGGAG	A	2950.41	PASS	AB=0.951;AC=17;AF=0.315;AN=54;BaseQRankSum=6.526;DP=678;FS=6.266;HRun=0;HaplotypeScore=118.8516;InbreedingCoeff=0.0520;MQ=36.90;MQ0=115;MQRankSum=-4.756;QD=7.89;ReadPosRankSum=1.309;VQSLOD=1.4093;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:30,2:14:51.11:140,0,51	0/1:10,0:9:2.28:165,0,2	0/0:15,0:3:2.98:0,3,23	./.	1/1:33,3:33:52.93:767,53,0	0/0:16,0:12:14.60:0,15,167	0/0:27,0:18:38.80:0,39,367	0/1:35,0:9:26.90:27,0,36	0/1:19,0:14:99:139,0,137	0/1:31,0:23:32.02:32,0,437	0/0:10,0:6:14.99:0,15,155	0/1:19,0:14:7.49:7,0,205	0/0:13,0:10:8.59:0,9,99	0/1:15,0:10:5.47:5,0,138	0/0:36,0:30:73.08:0,73,2081	0/0:13,0:12:1.16:0,1,180	0/1:30,0:27:34.73:35,0,158	0/0:23,0:12:19.92:0,20,225	0/1:37,0:13:16.76:17,0,177	0/0:18,0:14:12.96:0,13,167	0/0:45,0:19:24:0,24,285	0/0:14,0:9:16.58:0,17,173	0/0:12,0:11:19:0,19,215	0/0:44,0:34:7.47:0,7,369	1/1:25,7:26:55.45:711,55,0	0/1:34,7:27:35.64:592,0,36	1/1:17,4:18:27.37:358,27,0	0/1:8,8:14:29.54:121,0,30
chr10	20188199	.	G	GGAGGAGGAA	4562.92	PASS	AB=0.943;AC=36;AF=0.692;AN=52;BaseQRankSum=-1.375;DP=629;FS=10.012;HRun=0;HaplotypeScore=132.4927;InbreedingCoeff=-0.1441;MQ=35.55;MQ0=118;MQRankSum=-0.476;QD=8.25;ReadPosRankSum=-0.334;VQSLOD=3.0290;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:31,0:13:11.27:11,0,25	0/1:7,0:6:9.08:30,0,9	./.	./.	0/1:33,0:30:8.28:191,0,8	0/1:14,0:10:7.20:157,0,7	0/1:26,0:17:53.63:199,0,54	0/1:30,0:7:5.80:25,0,6	1/1:21,1:16:27.07:542,27,0	1/1:30,0:22:32.07:556,32,0	1/1:9,0:5:9:169,9,0	0/1:18,0:12:57.49:190,0,57	1/1:12,0:9:12.03:226,12,0	1/1:11,0:8:2.29:294,2,0	0/0:33,0:27:63.13:0,63,1384	1/1:12,0:11:13.96:327,14,0	0/1:15,13:25:10.12:161,0,10	0/0:22,0:11:6.68:0,7,103	1/1:39,0:12:20.61:351,21,0	1/1:14,0:11:11.99:291,12,0	0/1:41,1:16:30.98:31,0,65	1/1:15,0:10:9.43:69,9,0	1/1:12,0:11:0.06:184,0,0	0/1:27,17:33:99:123,0,137	0/1:29,0:25:8.73:113,0,9	0/1:39,0:25:48.63:158,0,49	1/1:19,0:15:12.43:100,12,0	1/1:13,0:13:1.34:65,1,0
chr10	20188244	.	GGAA	G	168.66	PASS	AB=0.919;AC=7;AF=0.135;AN=52;BaseQRankSum=4.054;DP=403;FS=3.731;HRun=0;HaplotypeScore=66.3874;InbreedingCoeff=0.0603;MQ=30.37;MQ0=87;MQRankSum=-2.291;QD=1.78;ReadPosRankSum=-2.379;VQSLOD=0.9708;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:21,0:10:27.57:28,0,220	0/0:1,0:1:3.01:0,3,43	./.	./.	0/1:6,1:6:7.60:68,0,8	0/0:11,0:7:12.04:0,12,205	0/0:7,0:3:5.98:0,6,56	0/0:22,0:10:26.40:0,26,403	0/0:25,0:22:44.37:0,44,951	0/0:14,0:7:9.03:0,9,139	0/0:7,0:4:9.03:0,9,146	0/0:16,0:10:17.07:0,17,229	0/0:9,0:6:6.02:0,6,94	0/0:15,0:3:3.01:0,3,33	0/0:34,0:27:62.99:0,63,1314	0/0:9,0:7:5:0,5,27	0/0:14,0:9:9.02:0,9,117	0/0:11,0:8:21.07:0,21,383	0/0:22,0:9:27.09:0,27,468	0/0:12,0:7:11.91:0,12,134	0/0:25,0:10:5.95:0,6,74	0/0:9,0:6:9.03:0,9,166	0/0:3,0:3:6.02:0,6,77	0/1:25,0:16:2.45:2,0,69	0/1:10,3:10:31.31:31,0,38	0/1:18,2:11:99:101,0,147	0/0:4,0:2:2.68:0,3,11	1/1:9,0:8:8.89:59,9,0
chr10	20188265	.	GAAA	G	1535.66	PASS	AB=0.798;AC=27;AF=0.540;AN=50;BaseQRankSum=2.712;DP=419;FS=3.207;HRun=3;HaplotypeScore=58.9331;InbreedingCoeff=-0.1991;MQ=30.30;MQ0=84;MQRankSum=-4.837;QD=7.14;ReadPosRankSum=0.393;VQSLOD=-0.5188;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:20,0:12:40.73:41,0,108	0/1:1,1:2:19.65:48,0,20	0/0:43,0:1:3.01:0,3,57	0/0:53,0:2:4.23:0,4,25	1/1:6,1:6:4.13:69,4,0	0/1:6,4:8:99:147,0,199	0/1:6,2:2:3.96:50,0,4	0/0:39,0:13:30.50:0,31,604	0/0:26,1:25:53.17:0,53,1159	0/1:9,5:11:99:143,0,167	1/1:2,3:3:6.02:90,6,0	0/1:10,5:12:99:197,0,118	1/1:6,2:6:3.31:88,3,0	0/1:15,1:5:9.84:10,0,44	0/0:30,0:27:60.24:0,60,1632	1/1:6,2:7:5.23:62,5,0	1/1:6,3:3:6.02:110,6,0	0/1:8,3:10:99:166,0,304	0/1:10,2:7:90.29:90,0,255	1/1:7,3:6:5.38:46,5,0	0/1:12,2:9:13.40:37,0,13	0/1:6,3:8:53.57:54,0,248	0/1:1,2:3:45.09:97,0,45	1/1:13,4:12:2.94:55,3,0	./.	0/1:15,2:9:51.86:89,0,52	./.	./.
chr10	20188277	.	GGAGGAAGAGGAA	G	870.70	PASS	AB=0.981;AC=15;AF=0.278;AN=54;BaseQRankSum=5.691;DP=520;FS=10.072;HRun=0;HaplotypeScore=113.7811;InbreedingCoeff=0.0380;MQ=30.74;MQ0=94;MQRankSum=-6.653;QD=4.66;ReadPosRankSum=-0.268;VQSLOD=1.1217;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:19,5:12:26.82:316,0,27	1/1:3,0:3:3.43:20,3,0	0/0:39,0:1:2.97:0,3,20	0/0:51,0:2:5.87:0,6,36	1/1:9,1:8:13.24:262,13,0	0/1:14,0:11:38.13:38,0,205	0/1:9,0:3:1.12:1,0,44	0/0:42,0:17:45.11:0,45,688	0/0:28,0:25:22.82:0,23,656	0/1:17,0:12:25.46:25,0,118	0/0:6,0:5:4.09:0,4,56	0/1:20,0:17:5.52:6,0,283	0/0:14,0:10:10.07:0,10,87	0/0:21,0:11:20.40:0,20,225	0/0:31,0:27:70.41:0,70,3367	0/0:15,0:12:1.77:0,2,24	0/1:10,0:6:5.68:6,0,99	0/0:14,0:11:13.83:0,14,112	0/0:17,0:4:9.84:0,10,125	0/0:9,0:6:2.59:0,3,10	0/1:26,0:15:32.65:33,0,90	0/0:15,0:14:14.99:0,15,417	0/0:7,0:7:16.91:0,17,113	0/0:20,0:13:6.02:0,6,118	0/1:14,0:12:26.45:26,0,40	0/1:28,0:15:99:234,0,100	1/1:12,0:9:5.98:52,6,0	./.
chr10	20188283	.	A	AG	678.18	PASS	AB=0.859;AC=16;AF=0.296;AN=54;BaseQRankSum=1.370;DP=558;FS=4.952;HRun=1;HaplotypeScore=82.2179;InbreedingCoeff=-0.2130;MQ=31.78;MQ0=96;MQRankSum=0.872;QD=2.59;ReadPosRankSum=1.020;VQSLOD=-0.4478;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,1:12:9.99:0,10,110	0/0:2,0:3:5.98:0,6,54	0/0:37,0:1:3:0,3,26	0/0:46,0:2:2.98:0,3,21	0/0:11,0:10:1.87:0,2,19	0/1:13,2:12:40.11:86,0,40	0/1:12,1:5:26.86:31,0,27	0/0:42,0:16:30.54:0,31,438	0/1:24,4:25:37.60:38,0,396	0/1:15,5:14:94.19:110,0,94	0/0:6,0:5:2.50:0,2,9	0/1:19,3:19:62.81:63,0,69	0/1:12,3:11:17.42:17,0,38	0/1:19,4:14:29.78:74,0,30	0/0:30,0:27:81.21:0,81,1030	0/1:17,5:19:23.05:50,0,23	0/0:11,0:6:7.62:0,8,55	0/1:11,4:11:72.20:72,0,127	0/1:18,2:5:45.34:45,0,64	1/1:7,2:6:2.96:19,3,0	1/1:25,5:17:9.27:92,9,0	0/1:15,4:17:13.34:97,0,13	0/1:10,1:10:8.90:36,0,9	0/0:21,0:13:7.98:0,8,47	0/0:15,0:13:5.23:0,5,46	0/0:30,0:16:27.88:0,28,185	0/0:13,0:9:5.21:0,5,22	./.
chr10	20188286	.	GGAA	G	324.93	PASS	AB=0.985;AC=12;AF=0.222;AN=54;BaseQRankSum=6.286;DP=579;FS=1.514;HRun=0;HaplotypeScore=92.8090;InbreedingCoeff=0.0565;MQ=32.45;MQ0=99;MQRankSum=-5.628;QD=1.38;ReadPosRankSum=-0.903;VQSLOD=1.8659;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:12:33.35:92,0,33	0/0:3,0:3:2.99:0,3,23	1/1:35,0:1:2.60:10,3,0	0/1:41,0:2:0:0,0,0	1/1:10,3:12:9.84:125,10,0	0/0:15,0:13:4.68:0,5,176	0/0:11,0:4:11.94:0,12,106	0/0:44,0:17:44.99:0,45,592	0/0:31,0:27:42.23:0,42,806	0/1:20,0:14:27.12:27,0,251	0/0:6,0:5:5.99:0,6,51	0/0:22,0:19:5.05:0,5,231	0/0:20,0:15:4.91:0,5,136	0/0:23,0:14:25.20:0,25,237	0/0:31,0:27:77.31:0,77,1596	0/0:24,0:21:27.60:0,28,303	0/1:14,0:7:4.29:4,0,89	0/1:17,0:12:50.37:50,0,199	0/1:23,0:6:32.18:32,0,72	0/0:12,0:9:11.58:0,12,87	0/0:30,0:17:17.66:0,18,111	0/0:19,0:18:35.84:0,36,412	0/0:11,0:10:14.93:0,15,135	0/0:23,0:14:10.27:0,10,114	0/1:14,1:12:17.85:43,0,18	0/1:30,1:17:79.37:79,0,92	0/0:13,0:9:3.35:0,3,32	./.
chr10	20188295	.	G	GGAA	689.03	PASS	AB=0.929;AC=10;AF=0.200;AN=50;BaseQRankSum=5.380;DP=611;FS=17.320;HRun=0;HaplotypeScore=111.1069;InbreedingCoeff=-0.0131;MQ=31.41;MQ0=100;MQRankSum=-6.935;QD=3.28;ReadPosRankSum=1.613;VQSLOD=1.2363;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:27,1:13:41.90:58,0,42	0/1:3,0:3:12:17,0,12	./.	./.	0/1:13,2:14:1.04:97,0,1	0/0:18,0:16:11.87:0,12,216	0/0:14,0:6:7.82:0,8,168	0/1:50,0:18:1.32:1,0,438	0/1:30,0:25:68.09:68,0,201	0/0:20,0:11:14.52:0,15,209	0/0:9,0:8:6.02:0,6,84	0/0:20,0:18:17.67:0,18,275	0/0:24,0:19:22.74:0,23,333	0/0:27,0:19:23.86:0,24,346	0/0:34,0:30:87.12:0,87,1262	0/0:23,0:20:22.93:0,23,418	0/0:16,0:9:15.02:0,15,222	0/1:17,0:12:14.68:15,0,118	0/0:36,0:11:17.45:0,17,140	0/0:16,0:13:10.48:0,10,137	0/0:33,0:16:3.45:0,3,175	0/0:22,0:20:36.73:0,37,415	0/0:12,0:10:15.76:0,16,174	0/0:22,0:13:19.20:0,19,217	0/1:12,6:14:33.52:95,0,34	0/1:29,7:21:67.10:352,0,67	1/1:11,2:9:0.95:116,1,0	./.
chr10	20189152	.	AGTT	A	4871.08	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=12.717;DP=618;FS=2.311;HRun=0;HaplotypeScore=89.2198;InbreedingCoeff=0.9891;MQ=76.78;MQ0=0;MQRankSum=-3.771;QD=38.06;ReadPosRankSum=3.006;VQSLOD=5.9332;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,30:30:66.22:1008,66,0	1/1:1,11:12:27.09:428,27,0	0/0:29,0:29:78.25:0,78,1515	0/0:21,0:20:51.17:0,51,1051	1/1:3,20:23:57.19:903,57,0	0/0:17,0:17:48.16:0,48,1028	0/0:24,0:24:63.22:0,63,1341	0/0:36,0:36:99:0,105,2166	0/0:25,0:25:69.24:0,69,1487	0/0:31,0:31:90.31:0,90,1907	0/0:19,0:19:57.20:0,57,1245	0/0:23,0:23:69.24:0,69,1494	0/0:27,0:27:75.26:0,75,1606	0/0:15,0:15:45.15:0,45,910	0/0:31,0:31:84.29:0,84,1786	0/0:27,0:27:72.25:0,72,1575	0/0:24,0:24:69.24:0,69,1423	0/0:24,0:24:66.23:0,66,1413	0/0:18,0:18:51.17:0,51,981	0/0:19,0:19:54.19:0,54,1171	0/0:19,0:19:57.20:0,57,1211	0/0:15,0:15:42.14:0,42,867	0/0:22,0:22:60.21:0,60,1297	0/0:24,0:24:63.22:0,63,1377	1/1:0,19:19:54.18:856,54,0	1/1:0,18:18:54.18:849,54,0	1/1:1,20:21:45.05:713,45,0	1/1:5,0:5:9.01:114,9,0
chr10	20189359	.	TG	T	4005.66	PASS	AB=0.950;AC=15;AF=0.268;AN=56;BaseQRankSum=12.930;DP=623;FS=4.977;HRun=7;HaplotypeScore=64.7352;InbreedingCoeff=0.9325;MQ=86.85;MQ0=0;MQRankSum=-3.215;QD=23.42;ReadPosRankSum=2.404;VQSLOD=3.9800;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,37:41:99:1071,105,0	1/1:2,12:14:36.08:367,36,0	0/0:30,0:30:78.18:0,78,931	0/1:18,1:19:3.65:4,0,347	1/1:1,24:25:60.14:612,60,0	0/0:23,0:23:66.21:0,66,830	0/0:27,0:27:66.20:0,66,817	0/0:21,0:21:54.17:0,54,668	0/0:22,0:22:62.22:0,62,748	0/0:20,0:20:48.15:0,48,603	0/0:21,0:21:54.17:0,54,679	0/0:21,0:21:57.18:0,57,717	0/0:21,0:21:60.19:0,60,755	0/0:20,0:20:57.18:0,57,717	0/0:32,0:32:81.22:0,81,985	0/0:23,0:23:60.19:0,60,755	0/0:26,0:26:69.21:0,69,856	0/0:15,0:15:42.13:0,42,528	0/0:15,0:15:36.12:0,36,453	0/0:27,0:27:72.23:0,72,905	0/0:32,0:32:84.25:0,84,1041	0/0:20,0:20:54.17:0,54,678	0/0:12,0:12:30.10:0,30,377	0/0:24,0:24:66.21:0,66,830	1/1:0,17:17:48.11:490,48,0	1/1:1,23:24:34.58:666,35,0	1/1:2,24:26:63.14:643,63,0	1/1:0,5:5:15.03:153,15,0
chr10	20190790	.	TG	T	2204.56	PASS	AB=0.890;AC=39;AF=0.696;AN=56;BaseQRankSum=6.964;DP=496;FS=2.265;HRun=2;HaplotypeScore=93.5937;InbreedingCoeff=0.3324;MQ=55.08;MQ0=58;MQRankSum=1.201;QD=6.04;ReadPosRankSum=2.319;VQSLOD=1.0108;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,14:16:12.04:152,12,0	1/1:3,5:6:5.27:109,5,0	0/0:52,0:17:44.45:0,44,470	0/0:44,0:17:40.51:0,41,465	1/1:8,8:13:5.76:62,6,0	0/1:13,0:12:21:56,0,21	0/1:25,0:20:9.91:10,0,13	0/0:13,0:11:30.09:0,30,368	0/0:11,0:11:23.56:0,24,288	0/1:15,0:14:41.38:60,0,41	1/1:11,0:11:12.72:39,13,0	1/1:16,0:14:17.89:114,18,0	1/1:8,0:7:12.03:53,12,0	1/1:10,0:10:18.32:83,18,0	0/0:10,1:8:12.03:0,12,145	1/1:14,0:12:18.17:105,18,0	1/1:23,2:22:9.26:147,9,0	1/1:14,1:15:29.72:155,30,0	0/1:17,0:14:36.79:37,0,139	0/1:17,0:16:15.49:37,0,15	1/1:23,1:23:27.54:110,28,0	1/1:9,0:9:7.04:29,7,0	1/1:10,2:11:12.11:65,12,0	1/1:35,0:31:48.90:171,49,0	1/1:5,10:14:18.06:228,18,0	0/1:9,11:18:99:320,0,128	0/1:4,10:14:21.11:210,0,21	1/1:4,1:2:3.01:38,3,0
chr10	20190791	.	G	GGT	6289.74	PASS	AB=1.000;AC=45;AF=0.804;AN=56;BaseQRankSum=-0.347;DP=481;FS=0.000;HRun=0;HaplotypeScore=83.5885;InbreedingCoeff=0.7790;MQ=56.43;MQ0=54;MQRankSum=-2.717;QD=18.07;ReadPosRankSum=3.626;VQSLOD=4.4382;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:16:0.94:1,1,0	0/1:8,0:6:0.01:1,0,0	0/0:53,0:18:29.75:0,30,377	0/0:45,0:18:37.53:0,38,393	1/1:15,0:12:3:25,3,0	1/1:13,0:12:12.13:299,12,0	1/1:10,16:21:3.01:36,3,0	0/0:14,0:12:18.06:0,18,226	0/0:10,0:10:21.07:0,21,262	1/1:15,0:14:30.10:455,30,0	1/1:12,0:12:21.07:316,21,0	1/1:14,0:13:30.09:423,30,0	1/1:8,0:7:12.04:187,12,0	1/1:8,0:8:18.05:256,18,0	0/0:11,0:9:12.02:0,12,137	1/1:13,0:11:27.06:385,27,0	1/1:21,0:19:39.13:581,39,0	1/1:12,0:12:30.06:411,30,0	1/1:17,0:14:24.54:360,25,0	1/1:17,0:16:29.28:487,29,0	1/1:22,0:23:36.12:541,36,0	1/1:7,0:7:18.06:261,18,0	1/1:11,0:11:12.04:186,12,0	1/1:33,0:29:63.19:933,63,0	1/1:15,0:14:0.94:2,1,0	1/1:20,0:18:20.47:78,20,0	1/1:14,0:14:14.25:60,14,0	1/1:5,0:2:2.37:8,2,0
chr10	20190981	.	GA	G	4818.26	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=11.911;DP=642;FS=0.754;HRun=2;HaplotypeScore=61.4215;InbreedingCoeff=0.9995;MQ=92.11;MQ0=0;MQRankSum=-4.232;QD=35.69;ReadPosRankSum=3.967;VQSLOD=5.3259;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,46:47:99:1635,126,0	1/1:0,9:9:24.08:312,24,0	0/0:29,0:29:87.26:0,87,1255	0/0:24,0:25:68.99:0,69,917	1/1:1,13:14:39.12:498,39,0	0/0:29,0:29:84.27:0,84,1232	0/0:30,0:30:90.28:0,90,1299	0/0:29,0:29:87.29:0,87,1304	0/0:25,0:25:75.25:0,75,1123	0/0:34,0:34:99:0,102,1528	0/0:12,0:12:33.11:0,33,495	0/0:17,0:17:51.17:0,51,764	0/0:22,0:22:66.22:0,66,984	0/0:19,0:19:57.18:0,57,836	0/0:20,0:20:57.18:0,57,834	0/0:17,0:17:51.17:0,51,758	0/0:23,0:23:69.18:0,69,983	0/0:29,0:29:87.26:0,87,1277	0/0:15,0:15:42.14:0,42,620	0/0:15,0:15:45.14:0,45,656	0/0:39,0:39:99:0,111,1644	0/0:20,0:20:57.19:0,57,854	0/0:23,0:23:66.22:0,66,987	0/0:35,0:35:99:0,102,1509	1/1:0,14:14:33.11:427,33,0	1/1:0,26:26:78.25:1012,78,0	1/1:0,13:13:36.12:467,36,0	1/1:0,12:12:36.12:467,36,0
chr10	20191612	.	GGAGAGA	G	71.47	PASS	AB=1.000;AC=9;AF=0.237;AN=38;BaseQRankSum=1.990;DP=480;FS=12.788;HRun=0;HaplotypeScore=93.5031;InbreedingCoeff=0.3901;MQ=73.69;MQ0=13;MQRankSum=-0.711;QD=0.85;ReadPosRankSum=-0.498;VQSLOD=0.9215;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	0/0:57,0:23:0.47:0,0,1	./.	0/0:7,0:9:5.09:0,5,110	0/0:11,0:14:3.01:0,3,38	0/0:20,0:20:5.99:0,6,71	0/0:15,0:15:9.03:0,9,210	0/0:16,0:16:9.02:0,9,126	0/0:8,0:8:6.01:0,6,68	1/1:8,6:14:3.01:60,3,0	0/0:10,0:13:5.30:0,5,47	0/0:8,0:8:0:0,0,0	./.	0/0:19,0:19:2.99:0,3,23	1/1:11,0:17:3.01:42,3,0	0/0:13,0:11:0.72:0,1,1	0/0:15,0:15:0:0,0,0	./.	./.	1/1:11,1:12:3:60,3,0	./.	0/0:21,9:30:0:0,0,0	./.	0/1:25,0:25:0:0,0,0	0/0:13,0:13:2.68:0,3,41	1/1:16,0:16:1.82:5,2,0
chr10	20192848	.	A	AAC	800.32	PASS	AB=0.943;AC=29;AF=0.580;AN=50;BaseQRankSum=-1.524;DP=535;FS=24.200;HRun=0;HaplotypeScore=80.5488;InbreedingCoeff=0.0956;MQ=60.49;MQ0=14;MQRankSum=-0.933;QD=2.25;ReadPosRankSum=1.116;VQSLOD=-0.1751;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:32:5.83:0,6,38	0/0:9,0:9:5.98:0,6,48	./.	./.	1/1:28,0:28:11.98:109,12,0	0/0:17,0:21:5.85:0,6,46	1/1:25,2:28:6.02:87,6,0	./.	1/1:15,0:15:8.93:73,9,0	1/1:13,0:13:4.25:31,4,0	1/1:7,0:7:5.99:48,6,0	1/1:11,4:17:3.01:44,3,0	0/1:15,5:22:24.70:35,0,25	0/1:11,0:11:9.05:17,0,9	1/1:12,0:12:6.01:68,6,0	0/1:13,1:14:51.63:99,0,52	0/1:24,11:35:69.11:113,0,69	0/1:15,0:13:4.25:56,0,4	1/1:17,0:16:3.48:44,3,0	0/1:14,0:14:18.93:19,0,26	1/1:23,0:22:3:25,3,0	0/1:15,0:15:3.27:41,0,3	1/1:7,0:7:2.99:23,3,0	0/1:38,0:40:3.13:3,0,151	0/0:14,0:15:8.85:0,9,73	0/1:20,0:19:20.84:21,0,25	0/0:7,0:7:8.86:0,9,77	0/0:8,0:9:14.85:0,15,133
chr10	20194002	.	A	AC	874.96	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-7.430;DP=626;FS=13.745;HRun=6;HaplotypeScore=60.3397;InbreedingCoeff=0.9802;MQ=91.26;MQ0=0;MQRankSum=-1.055;QD=29.17;ReadPosRankSum=-4.074;VQSLOD=1.4145;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,117,1193	0/0:8,0:8:15.03:0,15,153	0/0:28,0:28:63.02:0,63,605	0/0:23,0:23:50.03:0,50,448	0/0:22,0:22:54.09:0,54,542	0/0:27,0:27:81.13:0,81,809	0/0:36,0:36:99:0,99,1010	1/1:3,27:30:78.25:970,78,0	0/0:22,0:22:66.13:0,66,666	0/0:22,0:22:57.12:0,57,578	0/0:13,0:13:36.08:0,36,367	0/0:19,0:19:45.10:0,45,459	0/0:22,0:22:60.12:0,60,604	0/0:19,0:19:54.12:0,54,551	0/0:28,0:28:81.17:0,81,820	0/0:19,0:19:51.11:0,51,520	0/0:39,0:39:99:0,108,1093	0/0:18,0:18:54.08:0,54,540	0/0:20,0:20:54.09:0,54,537	0/0:16,0:16:48.11:0,48,489	0/0:26,0:26:72.15:0,72,727	0/0:12,0:12:36.04:0,36,355	0/0:16,0:16:45.09:0,45,453	0/0:25,0:25:75.13:0,75,749	0/0:20,0:20:60.13:0,60,608	0/0:21,0:21:54.12:0,54,551	0/0:25,0:25:69.15:0,69,703	0/0:7,0:7:21.05:0,21,214
chr10	20194273	.	T	TAA	3046.76	PASS	AB=0.788;AC=33;AF=0.589;AN=56;BaseQRankSum=-7.109;DP=448;FS=11.222;HRun=15;HaplotypeScore=77.3233;InbreedingCoeff=0.6883;MQ=74.69;MQ0=3;MQRankSum=-0.770;QD=11.67;ReadPosRankSum=-5.265;VQSLOD=0.0493;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:1,0:31:62.95:0,63,264	0/0:2,0:4:5.47:0,5,23	0/0:32,0:21:11.10:0,11,61	0/1:20,0:9:4.13:4,0,14	0/0:7,0:25:40.88:0,41,173	1/1:8,2:14:29.63:276,30,0	1/1:6,7:15:11.40:123,11,0	1/1:7,2:22:6.53:99,7,0	0/0:10,0:10:0.56:0,1,2	1/1:6,11:19:32.10:361,32,0	1/1:5,4:9:12.92:151,13,0	1/1:1,6:8:15.04:180,15,0	1/1:2,6:9:8.39:85,8,0	1/1:2,5:7:7.83:76,8,0	0/0:7,0:19:24.48:0,24,104	1/1:4,7:15:18.91:172,19,0	1/1:4,17:23:35.48:424,35,0	1/1:8,8:21:34.83:378,35,0	0/1:9,6:21:8.39:265,0,8	1/1:6,8:15:26.85:239,27,0	1/1:6,0:10:1.82:5,2,0	0/1:5,0:8:12.37:68,0,12	1/1:5,6:14:13.49:189,13,0	1/1:5,5:10:11.88:152,12,0	0/0:4,0:20:27.28:0,27,116	0/0:5,0:20:41.04:0,41,175	0/0:6,0:19:27.26:0,27,116	0/0:1,0:7:16.43:0,16,69
chr10	20194424	.	CCA	C	4537.17	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=11.198;DP=518;FS=4.351;HRun=0;HaplotypeScore=63.6123;InbreedingCoeff=0.9971;MQ=82.70;MQ0=2;MQRankSum=0.477;QD=38.45;ReadPosRankSum=1.505;VQSLOD=6.7423;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,39:42:99:1746,117,0	1/1:0,10:9:24.08:367,24,0	0/0:19,0:19:57.18:0,57,1028	0/0:13,0:13:35.76:0,36,584	1/1:0,15:15:39.09:570,39,0	0/0:23,0:23:69.22:0,69,1271	0/0:30,0:30:90.25:0,90,1578	0/0:34,0:34:99:0,99,1827	0/0:21,0:21:63.17:0,63,1089	0/0:19,0:19:54.16:0,54,989	0/0:11,0:11:30.10:0,30,563	0/0:14,0:14:42.13:0,42,751	0/0:17,0:17:49.05:0,49,909	0/0:13,0:13:39.13:0,39,738	0/0:14,0:14:39.13:0,39,740	0/0:14,0:14:42.14:0,42,765	0/0:36,0:36:99:0,108,2013	0/0:18,0:18:54.19:0,54,1024	0/0:22,0:22:63.21:0,63,1132	0/0:9,0:9:27.09:0,27,485	0/0:27,0:27:81.24:0,81,1443	0/0:10,0:10:30.10:0,30,569	0/0:10,0:10:27.09:0,27,512	0/0:26,0:26:78.25:0,78,1419	1/1:3,10:13:24.05:342,24,0	1/1:1,6:7:18.04:252,18,0	1/1:0,18:17:45.15:687,45,0	1/1:2,11:13:39.11:573,39,0
chr10	20194906	.	C	CCCCT	152.26	PASS	AB=0.817;AC=5;AF=0.109;AN=46;BaseQRankSum=3.469;DP=78;FS=0.000;HRun=0;HaplotypeScore=30.3202;InbreedingCoeff=-0.2248;MQ=95.03;MQ0=1;MQRankSum=-2.551;QD=10.88;ReadPosRankSum=0.499;VQSLOD=1.6179;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:3,0:3:9.03:0,9,166	./.	0/0:6,0:5:14.66:0,15,153	0/0:13,0:8:9.15:0,9,160	0/0:1,0:1:3.01:0,3,54	0/0:1,0:1:3.01:0,3,54	0/0:3,0:3:9.03:0,9,160	0/0:3,0:3:8.06:0,8,120	0/0:3,0:3:5.86:0,6,107	./.	0/0:2,0:2:3.01:0,3,54	0/1:1,1:2:44.31:44,0,50	0/1:2,2:4:44.25:112,0,44	0/1:2,1:3:52.82:53,0,97	./.	0/0:2,0:2:6.02:0,6,112	0/0:2,0:2:6.02:0,6,111	0/0:1,0:1:3.01:0,3,37	0/0:4,0:3:9.03:0,9,166	./.	0/0:5,0:5:8.87:0,9,152	0/1:2,0:2:27.57:28,0,50	0/1:3,0:3:23.02:23,0,32	0/0:5,0:5:12.04:0,12,197	0/0:2,0:2:6.02:0,6,111	0/0:2,0:2:6.01:0,6,81	0/0:2,0:2:3.01:0,3,57	./.
chr10	20196287	.	C	CAAAAA	7241.51	PASS	AB=1.000;AC=50;AF=0.926;AN=54;BaseQRankSum=-0.931;DP=462;FS=0.000;HRun=16;HaplotypeScore=109.5306;InbreedingCoeff=0.3300;MQ=71.32;MQ0=2;MQRankSum=-2.176;QD=16.61;ReadPosRankSum=-0.496;VQSLOD=1.7500;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:24:33.09:525,33,0	1/1:4,0:4:2.96:19,3,0	0/1:29,0:17:5.45:16,0,5	0/0:25,0:12:2.25:0,2,17	1/1:13,0:13:22.60:337,23,0	1/1:9,0:9:19.87:313,20,0	1/1:19,0:19:24.07:463,24,0	1/1:11,0:26:49.28:561,49,0	1/1:7,0:17:20.41:203,20,0	1/1:4,0:9:19.60:346,20,0	1/1:6,0:6:12:148,12,0	1/1:24,0:23:36.11:634,36,0	1/1:12,0:12:15.04:287,15,0	1/1:21,0:21:31.64:549,32,0	1/1:25,0:28:20.39:243,20,0	1/1:10,0:10:18.01:308,18,0	1/1:21,0:35:13.53:170,14,0	1/1:22,0:21:27:475,27,0	1/1:16,0:17:20.96:256,21,0	1/1:9,0:16:13.16:242,13,0	1/1:12,0:12:12.04:216,12,0	1/1:10,0:13:13.67:88,14,0	1/1:3,0:8:3.01:55,3,0	1/1:8,15:23:8.33:153,8,0	0/1:7,0:7:0:1,0,0	1/1:19,0:17:33.08:575,33,0	1/1:7,0:7:3.01:58,3,0	./.
chr10	20197299	.	GGT	G	4178.05	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-0.931;DP=1058;FS=6.611;HRun=0;HaplotypeScore=250.9477;InbreedingCoeff=0.9946;MQ=55.36;MQ0=23;MQRankSum=-0.706;QD=21.65;ReadPosRankSum=1.144;VQSLOD=3.0682;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:22,29:51:65.78:849,66,0	1/1:0,8:8:15.05:197,15,0	0/0:52,0:15:32.23:0,32,511	0/0:48,0:12:18.05:0,18,259	1/1:6,25:31:30.09:383,30,0	0/0:23,0:23:28.85:0,29,645	0/0:41,0:42:99:0,108,1699	0/0:41,0:40:95.37:0,95,1576	0/0:43,0:43:99:0,114,1900	0/0:42,0:42:99:0,111,1789	0/0:22,0:22:51.17:0,51,849	0/0:39,0:38:97.97:0,98,1641	0/0:26,0:26:66.09:0,66,1046	0/0:45,0:45:99:0,105,1746	0/0:40,1:39:99:0,105,1747	0/0:27,0:27:61.44:0,61,950	0/0:29,0:30:75.26:0,75,1273	0/0:27,0:27:69.53:0,70,1194	0/0:26,1:23:20.80:0,21,913	0/0:35,0:34:69.18:0,69,1134	0/0:139,0:136:99:0,270,4482	0/0:34,0:34:84.02:0,84,1392	0/0:25,0:25:57.11:0,57,863	0/0:55,0:55:99:0,123,2041	1/1:9,21:29:39.91:513,40,0	1/1:11,19:29:63.20:819,63,0	1/1:4,18:22:57.19:747,57,0	1/1:5,16:21:51.16:669,51,0
chr10	20197308	.	GTA	G	1234.25	PASS	AB=1.000;AC=8;AF=0.143;AN=56;BaseQRankSum=7.620;DP=1081;FS=7.133;HRun=0;HaplotypeScore=279.0596;InbreedingCoeff=0.1754;MQ=53.56;MQ0=29;MQRankSum=0.487;QD=6.67;ReadPosRankSum=2.283;VQSLOD=2.3418;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:46,0:46:99:246,0,120	0/1:8,0:8:14.64:57,0,15	0/0:56,0:16:38.79:0,39,550	0/0:47,0:9:17.83:0,18,244	0/1:28,0:28:6.58:109,0,7	0/0:23,0:23:34.59:0,35,708	0/0:45,0:45:99:0,121,1935	0/0:44,0:43:99:0,115,1837	0/0:46,0:46:99:0,125,2242	0/0:46,0:46:99:0,124,2039	0/0:21,1:22:49.23:0,49,959	0/0:43,0:42:99:0,101,1811	0/0:28,0:28:69.16:0,69,1184	0/0:47,0:47:99:0,118,2041	0/0:43,0:41:99:0,117,2018	0/0:23,1:24:59.50:0,59,1058	0/0:32,0:32:87.09:0,87,1524	0/0:29,1:30:75.23:0,75,1394	0/0:36,0:30:65.03:0,65,1019	0/0:35,0:34:80.38:0,80,1324	0/0:138,1:133:99:0,274,4896	0/0:37,0:37:89.69:0,90,1607	0/0:20,0:20:51.12:0,51,910	0/0:53,0:52:99:0,140,2344	0/1:30,0:29:41.26:152,0,41	0/1:28,0:27:20.63:269,0,21	0/1:27,0:25:33.84:256,0,34	1/1:18,0:18:49.44:289,49,0
chr10	20197315	.	A	AGT	22718.43	PASS	AB=1.000;AC=33;AF=0.589;AN=56;BaseQRankSum=-16.661;DP=1059;FS=0.591;HRun=0;HaplotypeScore=204.1448;InbreedingCoeff=0.9222;MQ=53.40;MQ0=31;MQRankSum=4.223;QD=32.78;ReadPosRankSum=1.439;VQSLOD=5.5594;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:89.79:0,90,1053	0/0:7,0:7:21.07:0,21,263	0/0:52,0:12:11.53:0,12,72	0/1:48,0:9:19.15:19,0,21	0/0:27,0:27:42.08:0,42,501	1/1:9,14:23:51.12:838,51,0	1/1:30,19:47:99:1777,111,0	0/0:43,0:43:79.78:0,80,980	0/0:48,0:48:99:0,112,1412	1/1:19,26:44:99:1867,117,0	1/1:8,13:21:48.16:794,48,0	1/1:16,26:41:84.16:1316,84,0	1/1:11,16:27:54.18:876,54,0	1/1:22,28:50:99:1829,117,0	0/0:40,0:38:93.30:0,93,1182	1/1:11,15:26:63.12:958,63,0	1/1:17,15:32:73.06:1281,73,0	1/1:9,21:30:83.95:1333,84,0	1/1:20,10:24:54.18:832,54,0	1/1:20,19:38:78.25:1262,78,0	1/1:48,76:119:99:3819,241,0	1/1:14,23:37:78.26:1277,78,0	1/1:4,14:18:44.74:734,45,0	1/1:21,31:51:85.21:1908,85,0	0/0:32,0:31:55.48:0,55,659	0/0:28,0:26:63.20:0,63,790	0/0:28,0:26:66.13:0,66,806	0/0:17,0:17:48.15:0,48,606
chr10	20197397	.	AGTGTGTGTGTGAGTGT	A	4460.71	PASS	AB=0.870;AC=12;AF=0.214;AN=56;BaseQRankSum=6.438;DP=1012;FS=52.272;HRun=0;HaplotypeScore=489.0570;InbreedingCoeff=0.8013;MQ=45.56;MQ0=23;MQRankSum=-6.558;QD=35.12;ReadPosRankSum=-4.090;VQSLOD=1.3767;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:22,9:29:14.79:357,15,0	1/1:9,7:13:15.63:446,16,0	0/0:24,0:8:20.28:0,20,404	0/0:39,0:14:21.23:0,21,347	1/1:11,4:16:12.30:214,12,0	0/0:27,0:27:40.45:0,40,1057	0/0:52,0:51:81.97:0,82,3140	0/0:44,0:37:87.06:0,87,2686	0/0:47,0:47:99:0,126,6640	0/0:54,0:53:99:0,138,4939	0/0:15,0:15:23.51:0,24,816	0/0:64,0:64:99:0,104,3412	0/0:39,0:38:64.06:0,64,2197	0/0:45,0:45:65.32:0,65,2091	0/0:46,0:46:99:0,121,6023	0/0:35,0:35:47.78:0,48,1488	0/0:40,0:39:73.24:0,73,2860	0/0:29,0:29:72.19:0,72,2404	0/0:27,0:19:51.15:0,51,1619	0/0:23,0:23:30.09:0,30,962	0/0:115,0:112:99:0,126,4234	0/0:35,0:33:36.09:0,36,1198	0/0:22,0:22:24.08:0,24,711	0/0:56,0:57:44.95:0,45,1755	1/1:11,5:16:21.08:788,21,0	0/1:13,6:19:40.25:1266,0,40	1/1:11,3:16:42.11:1114,42,0	0/1:12,0:11:4.62:275,0,5
chr10	20197407	.	TGA	T	2218.19	PASS	AB=0.997;AC=30;AF=0.536;AN=56;BaseQRankSum=14.305;DP=1033;FS=30.991;HRun=0;HaplotypeScore=322.0651;InbreedingCoeff=-0.2861;MQ=45.66;MQ0=23;MQRankSum=1.114;QD=2.61;ReadPosRankSum=-7.032;VQSLOD=0.6105;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:30,2:30:22.15:139,22,0	1/1:16,1:14:14.35:129,14,0	0/0:29,0:11:20.14:0,20,245	0/1:41,0:14:50.37:50,0,78	1/1:15,3:18:9.33:109,9,0	0/1:25,1:26:81.11:81,0,286	0/1:49,0:48:58.85:59,0,794	0/0:54,0:46:99:0,108,1587	0/0:49,0:49:99:0,141,2235	0/1:51,0:50:99:126,0,1247	0/1:15,0:15:22.70:23,0,235	0/1:69,0:68:99:125,0,944	0/1:38,0:37:87.97:88,0,627	0/1:43,0:43:98.48:98,0,478	0/0:50,0:50:99:0,121,2082	0/1:39,0:38:78.19:78,0,381	0/1:40,1:40:32.96:33,0,880	0/1:29,0:29:51.43:51,0,646	0/1:26,0:18:81.65:82,0,348	0/1:21,0:21:15.98:16,0,276	0/1:121,0:117:99:175,0,1118	0/1:33,0:31:46.62:47,0,310	0/1:27,0:27:99:100,0,106	0/1:51,0:49:8.15:8,0,528	1/1:16,0:16:23.06:241,23,0	1/1:19,2:20:22.68:235,23,0	1/1:16,1:17:43.39:271,43,0	0/1:10,0:9:11.40:30,0,11
chr10	20197409	.	AGT	A	5307.09	PASS	AB=0.892;AC=25;AF=0.446;AN=56;BaseQRankSum=4.858;DP=1041;FS=19.708;HRun=0;HaplotypeScore=317.2025;InbreedingCoeff=-0.6063;MQ=46.81;MQ0=21;MQRankSum=-1.505;QD=6.17;ReadPosRankSum=-6.453;VQSLOD=2.5546;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:34,0:31:0.56:27,1,0	0/1:16,0:13:4.61:39,0,5	0/0:30,1:13:12.66:0,13,316	0/1:41,0:15:10.06:10,0,106	0/1:17,1:18:7.99:8,0,14	0/1:22,4:26:99:227,0,161	0/1:38,11:48:99:357,0,578	0/0:52,0:44:99:0,103,1553	0/0:48,0:48:99:0,129,2048	0/1:43,12:54:99:663,0,994	0/1:11,3:14:60.33:60,0,175	0/1:57,12:68:99:476,0,742	0/1:32,8:39:99:327,0,477	0/1:37,8:45:99:440,0,327	0/0:49,0:49:99:0,119,1908	0/1:31,8:38:99:298,0,239	0/1:34,6:39:99:225,0,637	0/1:26,4:30:99:277,0,511	0/1:25,0:18:99:157,0,188	0/1:15,6:21:99:115,0,193	0/1:107,16:119:99:737,0,717	0/1:26,6:31:99:195,0,216	0/1:23,3:26:65.67:315,0,66	0/1:44,6:51:75.73:76,0,433	0/1:16,0:16:0.82:85,0,1	0/1:20,1:20:41.30:108,0,41	0/1:15,2:17:14.38:81,0,14	0/1:10,0:9:3.19:3,0,53
chr10	20197411	.	T	TGTGTGTGTGA	12693.63	PASS	AB=1.000;AC=35;AF=0.625;AN=56;BaseQRankSum=-2.075;DP=1051;FS=1.307;HRun=0;HaplotypeScore=407.2221;InbreedingCoeff=0.7548;MQ=46.19;MQ0=23;MQRankSum=-0.143;QD=16.81;ReadPosRankSum=-0.521;VQSLOD=2.0029;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:31:12.27:0,12,59	0/0:16,0:13:2.77:0,3,9	0/0:34,0:11:18.01:0,18,225	0/0:40,0:13:7.31:0,7,84	0/1:18,0:18:7.60:8,0,15	1/1:22,4:26:32.49:725,32,0	1/1:51,0:50:50.17:755,50,0	0/0:46,0:40:53.52:0,54,1003	0/0:49,0:49:99:0,99,2380	1/1:52,2:54:99:2050,111,0	1/1:15,0:15:8.74:97,9,0	1/1:61,5:66:60.01:1069,60,0	1/1:40,2:41:45.09:643,45,0	1/1:38,6:44:53.78:1081,54,0	0/0:48,0:49:86.35:0,86,1950	1/1:31,6:36:38.64:588,39,0	1/1:39,2:40:16.60:978,17,0	1/1:33,0:33:42.18:786,42,0	1/1:17,9:20:33.04:1006,33,0	1/1:22,2:24:20.96:317,21,0	1/1:121,1:118:92.29:1538,92,0	1/1:30,0:30:17.99:352,18,0	1/1:27,1:28:27.09:401,27,0	1/1:53,1:52:21.03:276,21,0	0/1:17,0:17:0.39:0,0,44	0/1:23,0:22:23.51:24,0,220	0/0:15,0:15:15.42:0,15,175	0/0:11,0:10:8.79:0,9,63
chr10	20197413	.	T	TGA	2045.36	PASS	AB=0.917;AC=13;AF=0.232;AN=56;BaseQRankSum=8.095;DP=1059;FS=5.033;HRun=0;HaplotypeScore=336.5766;InbreedingCoeff=0.8473;MQ=46.11;MQ0=22;MQRankSum=-7.333;QD=15.73;ReadPosRankSum=0.993;VQSLOD=2.9387;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:25,10:32:21.83:292,22,0	1/1:11,5:13:11.95:218,12,0	0/0:36,0:12:27.08:0,27,361	0/0:40,0:14:24.54:0,25,259	1/1:13,3:16:8.33:144,8,0	0/0:25,0:25:28.58:0,29,287	0/0:51,0:50:85.73:0,86,892	0/0:46,0:39:99:0,114,1559	0/0:52,0:52:99:0,153,2108	0/0:55,0:55:99:0,138,1400	0/0:16,0:16:23.42:0,23,269	0/0:67,0:66:99:0,100,1069	0/0:42,0:41:79.02:0,79,782	0/0:45,0:45:59.05:0,59,569	0/0:50,0:50:99:0,131,1885	0/0:39,0:38:46.06:0,46,453	0/0:42,0:41:44.33:0,44,813	0/0:32,0:32:3.72:0,4,652	0/0:29,0:21:48.06:0,48,386	0/0:23,0:23:38.34:0,38,390	0/0:124,0:120:99:0,137,1309	0/0:31,0:30:38.24:0,38,373	0/0:28,0:28:37.39:0,37,280	0/0:54,0:53:42.68:0,43,515	1/1:9,6:15:23.09:359,23,0	1/1:19,4:22:10.79:610,11,0	1/1:12,2:14:26.10:389,26,0	0/1:10,1:10:12.17:215,0,12
chr10	20197508	.	G	GGTGT	17820.60	PASS	AB=0.647;AC=36;AF=0.643;AN=56;BaseQRankSum=-7.424;DP=1328;FS=23.595;HRun=0;HaplotypeScore=399.6760;InbreedingCoeff=0.0664;MQ=43.96;MQ0=35;MQRankSum=3.407;QD=15.87;ReadPosRankSum=7.006;VQSLOD=2.9733;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:45:36.48:198,36,0	1/1:3,0:10:19.77:93,20,0	0/0:54,0:11:16.66:0,17,202	0/0:58,0:17:22.74:0,23,374	1/1:9,0:48:88.04:419,88,0	1/1:9,17:32:11.32:658,11,0	0/1:21,12:47:63.10:983,0,63	0/0:48,0:47:88.22:0,88,1637	1/1:13,51:65:80.95:2052,81,0	0/1:31,18:64:99:1786,0,178	0/1:16,11:38:49.06:565,0,49	0/1:16,29:59:3.70:1281,0,4	0/1:22,9:43:99:616,0,117	1/1:17,17:48:5.90:908,6,0	0/0:41,0:41:99:0,102,1683	0/1:18,12:42:50.05:540,0,50	0/1:25,17:46:3.43:1220,0,3	1/1:15,16:35:2.54:1216,3,0	0/1:26,2:21:6.67:335,0,7	0/1:20,11:55:99:434,0,103	0/1:73,32:121:42.61:1512,0,43	0/1:17,12:50:99:423,0,113	0/1:14,21:47:95.42:1004,0,95	1/1:20,17:53:10.27:695,10,0	1/1:13,0:34:58.15:296,58,0	1/1:26,0:43:63.57:323,64,0	1/1:6,0:19:37.57:182,38,0	1/1:2,0:9:16.89:80,17,0
chr10	20197515	.	G	GGT	51.13	PASS	AB=0.995;AC=9;AF=0.161;AN=56;BaseQRankSum=-1.605;DP=1292;FS=3.851;HRun=0;HaplotypeScore=426.8132;InbreedingCoeff=0.3791;MQ=43.32;MQ0=36;MQRankSum=1.946;QD=0.26;ReadPosRankSum=6.611;VQSLOD=0.5635;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:42,1:43:10.76:11,0,12	0/1:9,0:9:6.58:7,0,7	0/0:50,0:8:18.43:0,18,272	0/0:49,0:10:30.10:0,30,478	0/1:49,0:48:23.11:23,0,64	0/0:32,0:31:37.53:0,38,336	0/0:51,1:49:75.07:0,75,657	0/0:51,0:47:99:0,132,2002	0/0:64,0:64:99:0,104,730	0/0:70,0:61:99:0,149,1418	0/0:38,0:38:59.74:0,60,594	0/0:68,0:66:76.32:0,76,539	0/0:41,0:39:75.87:0,76,653	0/0:45,0:44:59.08:0,59,444	0/0:43,0:43:99:0,126,1956	0/0:38,0:36:57.26:0,57,515	0/0:45,0:44:38.34:0,38,626	0/0:36,0:36:65.58:0,66,604	0/0:23,0:13:29.77:0,30,324	0/0:56,0:55:62.49:0,62,624	0/0:128,2:124:85.75:0,86,880	0/0:59,0:56:59.23:0,59,598	0/0:46,0:46:70.81:0,71,625	0/0:55,0:55:2.11:0,2,216	0/1:33,0:33:0.48:0,0,39	0/1:39,0:34:41.51:42,0,223	1/1:17,0:16:17.72:74,18,0	1/1:8,0:8:9.95:32,10,0
chr10	20197563	.	A	AG	55.73	PASS	AB=0.851;AC=4;AF=0.071;AN=56;BaseQRankSum=5.098;DP=1156;FS=0.000;HRun=0;HaplotypeScore=315.1800;InbreedingCoeff=-0.0784;MQ=42.13;MQ0=35;MQRankSum=-4.872;QD=0.94;ReadPosRankSum=-3.089;VQSLOD=1.2741;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:12.29:0,12,123	0/1:7,1:7:17.12:17,0,118	0/0:40,0:9:18.06:0,18,252	0/0:52,0:8:23.48:0,23,278	0/0:36,6:41:17.06:0,17,451	0/0:27,0:26:35.28:0,35,459	0/0:51,0:47:74.78:0,75,975	0/0:74,0:54:99:0,132,1824	0/0:48,0:47:88.94:0,89,1368	0/0:74,0:71:99:0,182,2270	0/0:28,0:28:48.12:0,48,671	0/0:60,0:59:74.88:0,75,1023	0/0:38,0:36:71.23:0,71,1114	0/0:34,0:33:51.17:0,51,672	0/0:43,0:43:99:0,129,1781	0/0:35,0:33:72.12:0,72,989	0/0:40,0:36:73.62:0,74,829	0/0:29,0:29:64:0,64,681	0/0:30,0:23:66.09:0,66,834	0/0:45,0:44:66.14:0,66,923	0/0:126,0:116:70.75:0,71,897	0/0:49,0:47:62.93:0,63,880	0/0:29,0:29:51.04:0,51,714	0/0:55,0:54:31.68:0,32,409	0/0:25,7:31:23.57:0,24,333	0/1:26,4:27:87.45:87,0,554	0/1:13,1:14:20.88:21,0,283	0/1:4,3:7:38.84:39,0,75
chr10	20197568	.	AGTGTGTGTATGTGAGT	A	3946.16	PASS	AB=0.973;AC=16;AF=0.286;AN=56;BaseQRankSum=7.757;DP=1082;FS=17.428;HRun=0;HaplotypeScore=455.8639;InbreedingCoeff=0.6366;MQ=43.11;MQ0=35;MQRankSum=-8.143;QD=15.66;ReadPosRankSum=-4.509;VQSLOD=0.0515;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:12,1:14:8.04:25,0,8	1/1:8,0:7:6.02:172,6,0	0/0:36,0:8:18.53:0,19,358	0/0:52,0:9:17.65:0,18,324	1/1:42,0:41:31.40:439,31,0	0/0:22,0:22:29.97:0,30,1415	0/1:46,0:44:20.49:20,0,2552	0/0:71,0:50:99:0,114,3375	0/0:47,0:46:96.23:0,96,3891	0/0:65,0:64:58.20:0,58,5100	0/0:22,0:23:45.03:0,45,2172	0/0:55,0:54:77.48:0,77,3754	0/0:38,0:36:86:0,86,3223	0/0:29,0:29:49.37:0,49,2218	0/0:43,0:43:99:0,111,4375	0/0:34,0:32:28.98:0,29,2951	0/1:35,0:31:56.68:57,0,2086	0/1:28,0:28:99:137,0,1602	0/0:29,0:22:60.15:0,60,1964	0/0:41,0:40:69.57:0,70,2881	0/0:124,0:115:60.46:0,60,2809	0/0:44,0:43:53.46:0,53,2627	0/0:26,0:26:47.80:0,48,2086	0/0:49,0:47:25.30:0,25,1507	1/1:27,2:28:17.77:312,18,0	1/1:28,3:29:69.23:1747,69,0	1/1:8,2:10:27.07:609,27,0	1/1:7,0:7:15.05:428,15,0
chr10	20197573	.	GTGTA	G	1600.87	PASS	AB=0.862;AC=11;AF=0.196;AN=56;BaseQRankSum=10.075;DP=1076;FS=33.273;HRun=0;HaplotypeScore=333.2819;InbreedingCoeff=-0.0176;MQ=43.12;MQ0=27;MQRankSum=-8.240;QD=6.25;ReadPosRankSum=-4.158;VQSLOD=1.0693;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:13,1:14:11.99:12,0,13	0/1:8,0:7:24.49:51,0,24	0/0:31,0:10:26.96:0,27,469	0/0:50,0:9:7.30:0,7,240	0/1:24,19:42:33.78:366,0,34	0/0:24,0:24:32.99:0,33,792	0/1:46,0:42:17.53:18,0,1791	0/0:69,0:48:99:0,117,2918	0/0:51,0:50:99:0,108,2402	0/0:61,0:60:62.60:0,63,3477	0/0:22,0:22:45.15:0,45,1201	0/0:53,1:53:77.96:0,78,1909	0/0:40,1:39:78.97:0,79,2024	0/0:29,0:28:44.97:0,45,1181	0/0:43,0:43:99:0,120,2908	0/0:36,1:34:22.26:0,22,1661	0/1:28,5:31:99:150,0,1103	0/1:20,7:28:99:222,0,939	0/0:28,0:21:60.20:0,60,1406	0/0:38,0:37:69.10:0,69,1696	0/0:108,6:114:36.53:0,37,1445	0/0:44,0:42:53.34:0,53,1390	0/0:24,0:24:50.64:0,51,1330	0/0:43,6:48:11.74:0,12,685	1/1:18,10:27:18.42:292,18,0	0/1:28,5:29:99:387,0,634	0/1:10,4:14:94.53:225,0,95	0/1:6,1:7:32.40:32,0,176
chr10	20197575	.	GTA	G	297.59	PASS	AB=1.000;AC=8;AF=0.143;AN=56;BaseQRankSum=11.334;DP=1072;FS=24.850;HRun=0;HaplotypeScore=320.7233;InbreedingCoeff=0.1586;MQ=44.47;MQ0=27;MQRankSum=-8.024;QD=1.78;ReadPosRankSum=-5.009;VQSLOD=0.6074;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:13,0:13:8.13:11,0,8	0/1:7,0:6:10.96:13,0,11	0/0:28,0:10:26.84:0,27,329	0/0:49,1:10:5.55:0,6,204	0/1:45,0:44:6.51:121,0,7	0/0:24,0:24:33.03:0,33,584	0/0:44,2:42:31.08:0,31,1305	0/0:71,0:50:99:0,123,2201	0/0:50,0:49:99:0,108,1783	0/0:62,0:61:99:0,120,2590	0/0:21,1:22:45.15:0,45,868	0/0:55,0:54:79.92:0,80,1414	0/0:40,0:38:65.18:0,65,1483	0/0:29,0:28:44.65:0,45,829	0/0:41,0:41:99:0,120,2143	0/0:36,0:35:54.81:0,55,1240	0/0:36,0:32:2.30:0,2,787	0/1:27,0:27:51.97:52,0,701	0/0:28,0:21:60.66:0,61,1080	0/0:39,0:38:69.15:0,69,1240	0/0:124,1:115:42.22:0,42,1066	0/0:42,1:41:53.65:0,54,1008	0/0:23,0:23:50.79:0,51,974	0/0:50,0:48:11.72:0,12,484	1/1:28,0:27:15.05:97,15,0	0/1:33,0:29:81.88:82,0,310	0/1:14,0:14:41.59:59,0,42	0/0:5,0:5:5.37:0,5,68
chr10	20197580	.	TGA	T	474.71	PASS	AB=0.965;AC=15;AF=0.268;AN=56;BaseQRankSum=10.569;DP=1055;FS=15.626;HRun=0;HaplotypeScore=321.1747;InbreedingCoeff=0.6938;MQ=43.77;MQ0=26;MQRankSum=-9.055;QD=2.47;ReadPosRankSum=-2.350;VQSLOD=0.5484;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:12,0:12:9.72:10,0,10	1/1:6,0:5:5.65:31,6,0	0/1:26,0:10:1.79:2,0,279	0/0:45,0:9:10.89:0,11,89	1/1:42,0:41:7.65:47,8,0	0/0:26,0:26:30.07:0,30,566	0/0:43,0:42:48.18:0,48,1294	0/0:70,0:51:99:0,124,1833	0/0:45,0:44:96.24:0,96,1709	0/0:61,0:60:99:0,154,2561	0/0:22,0:22:45.13:0,45,793	0/0:54,0:53:81.02:0,81,1297	0/0:41,0:39:77.30:0,77,1410	0/0:31,0:30:46.85:0,47,787	0/0:45,0:45:99:0,126,2211	0/0:34,1:33:49.38:0,49,1154	0/0:36,0:32:16.28:0,16,770	0/1:25,1:26:24.80:25,0,692	0/0:31,0:25:69.58:0,70,1087	0/0:38,0:37:57.58:0,58,1016	0/0:121,3:116:53.38:0,53,1075	0/0:39,0:38:50.62:0,51,917	0/0:23,0:23:50.74:0,51,871	0/0:51,0:49:24.81:0,25,480	1/1:28,0:27:5.12:27,5,0	1/1:32,0:28:35.20:291,35,0	1/1:13,0:13:16.95:140,17,0	1/1:5,0:5:11.36:78,11,0
chr10	20197582	.	AGT	A	1125.89	PASS	AB=0.713;AC=13;AF=0.232;AN=56;BaseQRankSum=8.006;DP=1047;FS=12.353;HRun=0;HaplotypeScore=314.6680;InbreedingCoeff=0.3919;MQ=43.70;MQ0=27;MQRankSum=-7.680;QD=5.69;ReadPosRankSum=-0.974;VQSLOD=1.0890;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,3:9:2.28:11,2,0	1/1:1,4:5:3.01:39,3,0	0/0:27,0:10:18.47:0,18,229	0/0:44,0:9:5.90:0,6,59	1/1:26,17:42:8.82:104,9,0	0/0:26,0:26:29.74:0,30,482	0/0:43,0:42:70.72:0,71,1133	0/0:67,0:49:81.25:0,81,1299	0/0:45,0:44:93.25:0,93,1516	0/0:62,0:61:99:0,135,2073	0/0:23,0:23:39.12:0,39,618	0/0:52,1:52:68.81:0,69,1090	0/0:39,1:38:76.59:0,77,1167	0/0:31,0:30:41.95:0,42,678	0/0:44,0:44:99:0,114,1936	0/0:33,1:31:67.95:0,68,1029	0/1:29,5:31:32.06:32,0,658	0/1:20,8:28:47.12:47,0,605	0/0:30,0:24:54.04:0,54,844	0/0:36,1:36:51.04:0,51,826	0/0:118,5:116:46.71:0,47,926	0/0:39,0:38:44.63:0,45,756	0/0:24,0:24:44.75:0,45,715	0/0:42,6:47:26.85:0,27,414	0/1:14,14:27:25.19:25,0,49	0/1:12,20:28:34.69:595,0,35	0/1:6,7:13:6.27:274,0,6	1/1:1,4:5:12.04:156,12,0
chr10	20197594	.	AGT	A	57.44	PASS	AB=0.941;AC=9;AF=0.161;AN=56;BaseQRankSum=7.032;DP=975;FS=7.621;HRun=0;HaplotypeScore=308.8164;InbreedingCoeff=0.1285;MQ=48.76;MQ0=24;MQRankSum=-4.022;QD=0.31;ReadPosRankSum=-1.952;VQSLOD=1.1706;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:11:2.63:12,3,0	0/0:6,0:6:8.51:0,9,114	0/1:31,0:15:20.98:21,0,341	0/1:45,0:10:3.13:3,0,89	0/0:32,0:32:1.84:0,2,19	0/0:22,0:22:24.05:0,24,398	0/0:41,0:40:59.56:0,60,941	0/0:50,0:40:74.73:0,75,1179	0/0:45,0:44:99:0,102,1675	0/0:49,0:48:99:0,111,1826	0/0:19,0:19:30.10:0,30,488	0/0:55,1:55:65.76:0,66,1029	0/0:37,1:36:79.95:0,80,1136	0/0:34,0:33:38.96:0,39,636	0/0:47,0:47:99:0,129,2124	0/0:29,1:28:62.38:0,62,926	0/1:30,5:31:56.35:56,0,661	0/1:21,4:25:53.32:53,0,613	0/0:27,0:20:48.15:0,48,779	0/0:33,0:32:39.04:0,39,653	0/0:108,0:103:42.40:0,42,918	0/0:35,0:34:35.59:0,36,578	0/0:21,0:21:29.46:0,29,504	0/0:41,4:42:27.02:0,27,428	1/1:24,0:23:1.22:3,1,0	0/0:42,0:36:45.14:0,45,424	0/1:15,0:15:28.68:29,0,72	0/0:6,0:6:3.30:0,3,40
chr10	20197618	.	A	AGTGTGTGTGTG	12501.35	PASS	AB=0.972;AC=42;AF=0.750;AN=56;BaseQRankSum=4.128;DP=962;FS=16.900;HRun=0;HaplotypeScore=356.0711;InbreedingCoeff=0.5854;MQ=50.43;MQ0=37;MQRankSum=-6.232;QD=16.69;ReadPosRankSum=-2.591;VQSLOD=2.0352;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:20:7.42:201,7,0	1/1:10,0:10:18.06:594,18,0	0/0:47,0:19:8.47:0,8,203	0/1:63,0:22:9.85:10,0,364	0/0:33,0:33:1.89:0,2,6	1/1:9,17:27:8.94:203,9,0	1/1:44,0:39:39.39:704,39,0	0/0:27,0:27:39.12:0,39,942	0/0:46,0:46:99:0,105,3015	1/1:20,24:49:68.56:2567,69,0	1/1:18,0:17:19.07:454,19,0	1/1:18,23:44:9.19:296,9,0	1/1:35,2:33:36.11:1458,36,0	1/1:18,16:34:2.75:20,3,0	0/0:44,0:44:99:0,105,3210	1/1:23,2:22:23.43:817,23,0	1/1:36,0:30:26.87:675,27,0	0/1:20,1:23:46.71:760,0,47	1/1:26,0:20:21.05:506,21,0	1/1:8,18:30:1.49:18,1,0	1/1:75,0:77:16.01:394,16,0	1/1:25,2:26:13.53:214,14,0	0/0:15,1:16:1.11:0,1,2	1/1:32,2:36:7.33:127,7,0	1/1:29,0:28:16.47:194,16,0	1/1:44,0:38:54.19:1755,54,0	1/1:17,0:17:9.76:337,10,0	1/1:9,0:7:6.02:200,6,0
chr10	20197620	.	T	TGTGTGTGTG	9130.59	PASS	AB=0.978;AC=28;AF=0.500;AN=56;BaseQRankSum=4.063;DP=982;FS=0.897;HRun=0;HaplotypeScore=350.9919;InbreedingCoeff=-0.1265;MQ=50.54;MQ0=37;MQRankSum=-4.929;QD=11.71;ReadPosRankSum=2.916;VQSLOD=2.7475;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:9,9:21:7.81:318,8,0	1/1:3,7:12:18.06:827,18,0	0/1:50,0:20:2.17:2,0,297	0/1:66,0:24:64.64:65,0,387	0/1:18,16:34:0.07:0,0,4	0/1:29,0:28:89.36:98,0,89	0/1:44,0:39:99:183,0,171	0/0:28,0:28:45.14:0,45,1060	0/0:47,0:47:99:0,114,2911	0/1:51,0:50:83.68:1383,0,84	0/1:18,0:17:12.32:166,0,12	0/1:46,0:44:28.59:157,0,29	0/1:36,0:32:99:830,0,166	0/0:38,0:35:7.77:0,8,76	0/0:44,0:44:99:0,108,2927	0/1:23,1:21:99:425,0,218	0/1:36,0:29:68.36:273,0,68	0/1:23,0:23:99:399,0,124	0/1:24,0:19:50.26:174,0,50	0/0:29,0:29:12.27:0,12,116	0/1:89,0:81:99:110,0,207	0/1:28,0:27:46.08:46,0,74	0/0:16,0:16:6.74:0,7,63	0/1:39,0:36:7.45:7,0,21	1/1:17,7:28:29.74:476,30,0	1/1:24,20:41:60.18:2443,60,0	1/1:9,8:20:5.93:472,6,0	1/1:6,4:9:6.02:278,6,0
chr10	20197738	.	GGT	G	5440.30	PASS	AB=0.815;AC=28;AF=0.538;AN=52;BaseQRankSum=-5.516;DP=1003;FS=1.069;HRun=0;HaplotypeScore=191.9175;InbreedingCoeff=0.5659;MQ=42.83;MQ0=74;MQRankSum=3.451;QD=7.85;ReadPosRankSum=1.682;VQSLOD=4.7494;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:33:12.51:0,13,76	0/0:13,0:9:4.99:0,5,18	./.	./.	0/0:23,0:21:14.99:0,15,87	1/1:22,9:29:35.98:377,36,0	1/1:24,8:32:38.64:407,39,0	0/0:39,0:28:24.01:0,24,238	0/1:28,0:31:3.53:35,0,4	1/1:47,11:46:51.08:667,51,0	0/1:18,7:24:15.87:232,0,16	0/1:41,10:46:7.67:314,0,8	1/1:21,9:29:33.07:358,33,0	1/1:25,6:28:23.88:240,24,0	0/0:33,2:35:6.49:0,6,608	1/1:16,10:21:17.96:370,18,0	0/1:30,11:41:0.40:424,0,0	1/1:21,3:22:0.95:161,1,0	0/1:40,2:27:2.28:174,0,2	1/1:25,2:23:17.20:150,17,0	1/1:85,16:97:46.90:597,47,0	1/1:28,7:35:19.29:302,19,0	1/1:21,5:26:12.05:252,12,0	0/1:34,13:46:3.18:380,0,3	0/0:26,0:26:17.94:0,18,75	0/0:42,0:32:33.50:0,33,227	0/0:22,0:20:16.29:0,16,96	0/0:8,0:8:10.86:0,11,53
chr10	20198465	.	CT	C	6649.53	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=12.481;DP=641;FS=1.891;HRun=1;HaplotypeScore=69.8783;InbreedingCoeff=0.9996;MQ=81.59;MQ0=0;MQRankSum=-4.176;QD=38.89;ReadPosRankSum=3.002;VQSLOD=5.6202;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,34:34:84.28:1172,84,0	1/1:0,12:12:36.12:494,36,0	0/0:19,0:19:57.16:0,57,855	0/0:21,0:21:24.24:0,24,778	1/1:0,24:24:69.23:962,69,0	0/0:22,0:22:66.23:0,66,1052	0/0:24,0:24:72.25:0,72,1151	0/0:24,0:24:72.25:0,72,1148	0/0:27,0:27:81.28:0,81,1292	0/0:25,0:25:75.26:0,75,1191	0/0:24,0:24:72.23:0,72,1126	0/0:16,0:16:48.16:0,48,767	0/0:22,0:22:66.22:0,66,1042	0/0:14,0:14:42.14:0,42,668	0/0:16,0:16:48.16:0,48,765	0/0:23,0:23:66.23:0,66,1053	0/0:31,0:30:83.67:0,84,1383	0/0:13,0:13:36.12:0,36,576	0/0:21,0:21:57.19:0,57,886	0/0:30,0:30:90.31:0,90,1433	0/0:29,0:29:84.29:0,84,1336	0/0:20,0:20:60.19:0,60,931	0/0:22,0:22:66.21:0,66,1019	0/0:27,0:27:72.19:0,72,1095	1/1:0,28:28:78.26:1091,78,0	1/1:0,29:29:84.28:1174,84,0	1/1:0,31:31:87.29:1215,87,0	1/1:0,13:13:39.13:542,39,0
chr10	20198587	.	AGGGG	A	4145.19	PASS	AB=0.632;AC=47;AF=0.839;AN=56;BaseQRankSum=1.682;DP=447;FS=2.308;HRun=15;HaplotypeScore=118.7817;InbreedingCoeff=0.6325;MQ=63.47;MQ0=0;MQRankSum=-1.820;QD=10.77;ReadPosRankSum=4.900;VQSLOD=0.2861;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,0:33:22.43:177,22,0	1/1:1,0:11:19.84:113,20,0	0/0:23,0:13:12.74:0,13,194	0/0:17,0:14:11.36:0,11,111	1/1:4,0:25:16.40:138,16,0	1/1:7,5:12:8.97:123,9,0	1/1:9,8:22:20.64:207,21,0	1/1:10,7:17:14.91:193,15,0	1/1:6,0:25:53.48:425,53,0	1/1:8,2:10:5.88:81,6,0	1/1:3,2:7:4.47:61,4,0	1/1:5,4:12:8.99:120,9,0	1/1:6,2:10:14.99:170,15,0	1/1:8,2:10:2.92:41,3,0	0/0:13,0:13:12.04:0,12,195	1/1:5,11:17:32.94:431,33,0	1/1:7,26:34:57.12:742,57,0	1/1:5,6:12:8.94:123,9,0	1/1:4,0:7:8.90:70,9,0	0/0:5,3:8:0:0,0,0	1/1:13,5:18:5.88:82,6,0	0/1:5,7:12:0:0,0,0	1/1:8,1:12:6.43:47,6,0	1/1:12,11:23:13.53:185,14,0	1/1:3,0:12:13.91:79,14,0	1/1:4,0:19:39.96:257,40,0	1/1:3,0:22:40.30:264,40,0	1/1:1,0:3:2.80:17,3,0
chr10	20198707	.	CAGTACCTTTCTACGTG	C	11500.56	PASS	AB=0.667;AC=13;AF=0.232;AN=56;BaseQRankSum=13.794;DP=637;FS=3.869;HRun=0;HaplotypeScore=279.4538;InbreedingCoeff=0.8979;MQ=86.54;MQ0=0;MQRankSum=-13.531;QD=100.00;ReadPosRankSum=3.094;VQSLOD=4.5714;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,15:21:48.14:2060,48,0	1/1:1,13:14:27.56:1278,28,0	0/0:24,0:23:66.23:0,66,3995	0/0:25,0:25:72.21:0,72,4825	1/1:0,19:19:54.19:2494,54,0	0/0:28,0:28:84.26:0,84,5981	0/0:20,0:20:60.21:0,60,4438	0/0:34,0:34:99:0,102,7291	0/0:20,0:20:60.18:0,60,3805	0/0:30,0:30:87.28:0,87,6075	0/0:27,0:27:78.24:0,78,5640	0/0:21,0:21:63.20:0,63,4606	0/0:26,0:26:75.26:0,75,5718	0/0:22,0:22:66.21:0,66,4793	0/0:17,0:17:51.18:0,51,3599	0/0:22,0:22:66.23:0,66,5025	0/0:24,0:24:69.24:0,69,4908	0/0:26,0:26:75.26:0,75,5249	0/0:27,0:27:78.24:0,78,4539	0/0:31,0:31:93.26:0,93,6630	0/0:27,0:27:75.26:0,75,5206	0/0:26,0:26:78.25:0,78,5312	0/0:21,0:21:63.22:0,63,4609	0/0:23,0:24:72.20:0,72,5230	1/1:1,14:15:39.13:1845,39,0	0/1:10,10:20:99:1411,0,202	1/1:3,12:15:33.11:1562,33,0	1/1:2,9:11:18.06:852,18,0
chr10	20200524	.	ATCTCC	A	623.45	PASS	AC=8;AF=0.154;AN=52;BaseQRankSum=4.927;DP=497;FS=24.267;HRun=0;HaplotypeScore=80.2685;InbreedingCoeff=0.8759;MQ=60.51;MQ0=36;MQRankSum=0.079;QD=10.94;ReadPosRankSum=-0.393;VQSLOD=0.8839;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:11:14.64:220,15,0	./.	0/0:27,0:17:45.12:0,45,573	0/0:40,0:28:69.62:0,70,875	0/0:12,0:8:0:0,0,0	0/0:18,0:18:50.99:0,51,647	0/0:19,0:19:43.24:0,43,564	0/0:33,0:32:84.25:0,84,1092	0/0:1,0:1:3.01:0,3,40	0/0:17,0:17:51.16:0,51,762	0/0:14,0:14:20.25:0,20,425	0/0:13,0:13:39.13:0,39,569	0/0:17,0:17:45.15:0,45,695	0/0:15,0:15:37.94:0,38,667	0/0:20,0:20:14.87:0,15,514	0/0:13,0:11:15.57:0,16,347	0/0:13,0:13:38.80:0,39,620	0/0:11,0:11:29.41:0,29,625	0/0:12,0:12:33.09:0,33,457	0/0:23,0:22:47.85:0,48,640	0/0:31,0:31:84.26:0,84,1124	0/0:21,0:21:54.18:0,54,721	0/0:12,0:12:30.09:0,30,386	0/0:24,0:24:51.12:0,51,759	./.	1/1:19,0:13:15.04:195,15,0	1/1:14,0:7:18.06:241,18,0	1/1:4,0:3:9.03:114,9,0
chr10	20200525	.	TCTC	T	573.74	PASS	AC=8;AF=0.154;AN=52;BaseQRankSum=5.655;DP=497;FS=24.148;HRun=0;HaplotypeScore=65.5466;InbreedingCoeff=0.8840;MQ=60.21;MQ0=38;MQRankSum=-1.148;QD=10.07;ReadPosRankSum=-0.162;VQSLOD=0.8466;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:11:14.80:190,15,0	./.	0/0:27,0:17:45.12:0,45,573	0/0:39,0:27:70.14:0,70,876	0/0:12,0:8:0:0,0,0	0/0:19,0:18:50.82:0,51,636	0/0:19,0:19:41.63:0,42,560	0/0:32,0:31:84.25:0,84,1092	0/0:1,0:1:3.01:0,3,40	0/0:17,0:17:51.08:0,51,677	0/0:14,0:14:29.17:0,29,435	0/0:13,0:13:39.13:0,39,546	0/0:17,0:17:45.15:0,45,649	0/0:15,0:15:37.67:0,38,572	0/0:20,0:20:28.54:0,29,526	0/0:13,0:11:24.23:0,24,356	0/0:14,0:14:38.76:0,39,536	0/0:12,0:12:31.44:0,31,512	0/0:11,0:11:33.09:0,33,438	0/0:23,0:22:47.92:0,48,640	0/0:32,0:32:84.17:0,84,1064	0/0:21,0:21:54.18:0,54,721	0/0:13,0:12:30.09:0,30,386	0/0:24,0:24:51.10:0,51,694	./.	1/1:6,13:13:15.05:193,15,0	1/1:14,0:7:18.06:223,18,0	1/1:4,0:3:9.03:114,9,0
chr10	20201236	.	T	TGG	2384.24	PASS	AB=0.641;AC=48;AF=0.857;AN=56;BaseQRankSum=0.767;DP=390;FS=6.556;HRun=9;HaplotypeScore=76.7851;InbreedingCoeff=0.5973;MQ=75.35;MQ0=5;MQRankSum=-4.022;QD=7.31;ReadPosRankSum=-1.442;VQSLOD=-0.3414;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:22,2:24:36.73:311,37,0	1/1:2,1:4:5.51:55,6,0	0/0:25,0:20:28.17:0,28,315	0/0:23,1:22:23.95:0,24,295	1/1:4,1:5:3.01:46,3,0	1/1:4,0:14:11.90:86,12,0	1/1:6,3:22:11.52:130,12,0	1/1:12,0:12:8.94:66,9,0	1/1:13,0:13:8.92:63,9,0	1/1:4,3:7:9.01:116,9,0	1/1:7,0:6:5.95:44,6,0	1/1:5,0:8:3:29,3,0	0/1:4,2:15:0:0,0,0	1/1:3,1:14:6.64:41,7,0	0/0:14,0:14:29.69:0,30,273	1/1:6,5:11:11.93:131,12,0	1/1:7,2:25:21:209,21,0	1/1:7,1:18:6.70:105,7,0	1/1:8,0:14:17.43:140,17,0	1/1:8,0:8:6:51,6,0	1/1:15,0:15:8.97:77,9,0	0/1:7,0:12:0:0,0,0	1/1:9,0:9:5.99:51,6,0	1/1:16,0:15:20.95:190,21,0	1/1:2,0:8:4.99:17,5,0	1/1:7,7:13:12.87:137,13,0	1/1:3,13:16:14.47:168,14,0	1/1:8,2:11:31.46:265,31,0
chr10	20202336	.	GGC	G	2083.29	PASS	AB=1.000;AC=33;AF=0.589;AN=56;BaseQRankSum=-1.890;DP=255;FS=11.575;HRun=0;HaplotypeScore=35.7728;InbreedingCoeff=0.7828;MQ=81.58;MQ0=0;MQRankSum=-1.695;QD=12.70;ReadPosRankSum=-5.095;VQSLOD=0.3902;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:20.60:0,21,243	0/0:8,0:8:20.89:0,21,212	0/0:12,0:11:25.71:0,26,233	0/0:9,0:8:23.92:0,24,238	0/0:10,0:10:27.49:0,27,340	1/1:1,8:9:6.01:67,6,0	1/1:18,2:20:29.81:295,30,0	0/0:7,0:7:20.64:0,21,177	0/0:3,0:3:4.26:0,4,43	1/1:8,1:9:24.01:215,24,0	1/1:4,0:4:2.96:19,3,0	1/1:13,0:13:2.98:21,3,0	1/1:7,0:7:18:155,18,0	1/1:17,0:17:44.86:364,45,0	0/0:9,0:9:25.20:0,25,306	1/1:11,0:11:25.51:185,26,0	1/1:9,3:12:20.41:151,20,0	1/1:10,0:10:6.90:48,7,0	1/1:3,0:3:6:53,6,0	1/1:4,0:4:5.98:60,6,0	1/1:10,0:10:12.47:104,12,0	1/1:10,0:10:20.91:169,21,0	1/1:7,0:7:17.78:136,18,0	1/1:12,0:12:27.01:238,27,0	0/0:4,0:4:12:0,12,130	0/1:6,0:6:12.67:13,0,78	0/0:14,0:14:24.59:0,25,325	0/0:4,0:4:9.02:0,9,110
chr10	20202337	.	GC	G	2234.28	PASS	AB=1.000;AC=33;AF=0.589;AN=56;BaseQRankSum=-1.545;DP=246;FS=9.845;HRun=1;HaplotypeScore=30.1499;InbreedingCoeff=0.7516;MQ=82.67;MQ0=0;MQRankSum=-3.001;QD=14.05;ReadPosRankSum=-4.696;VQSLOD=0.2281;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:20.03:0,20,182	0/0:7,0:7:20.85:0,21,172	0/0:12,0:11:24.55:0,25,187	0/0:9,0:8:22.95:0,23,193	0/0:9,1:10:1.89:0,2,175	1/1:8,1:9:5.98:48,6,0	1/1:15,2:17:42.28:332,42,0	0/0:7,0:7:13.85:0,14,118	0/0:2,0:2:2.82:0,3,16	1/1:9,0:9:24.01:216,24,0	1/1:0,4:4:2.96:19,3,0	1/1:0,11:11:2.98:21,3,0	1/1:6,0:6:18:155,18,0	1/1:15,2:17:44.49:336,44,0	0/0:8,0:8:21.28:0,21,206	1/1:9,2:11:29.85:252,30,0	1/1:11,0:11:23.91:197,24,0	1/1:2,8:10:6.90:48,7,0	1/1:5,0:5:12:106,12,0	1/1:0,4:4:5.95:42,6,0	1/1:10,0:10:12.31:104,12,0	1/1:9,0:9:20.92:169,21,0	1/1:6,1:7:17.79:136,18,0	1/1:12,0:12:27.48:239,27,0	0/0:4,0:4:11.96:0,12,103	0/1:7,0:7:23.27:23,0,50	0/0:14,0:14:32.21:0,32,245	0/0:4,0:4:8.69:0,9,76
chr10	20203072	.	TAGGA	T	142	PASS	AB=0.968;AC=9;AF=0.167;AN=54;BaseQRankSum=-0.888;DP=435;FS=30.310;HRun=0;HaplotypeScore=109.0276;InbreedingCoeff=-0.2073;MQ=64.44;MQ0=0;MQRankSum=4.606;QD=1.07;ReadPosRankSum=-0.851;VQSLOD=0.2308;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:24.43:0,24,267	0/0:7,0:7:11.96:0,12,151	0/0:18,0:17:15.03:0,15,278	0/0:13,0:12:9.03:0,9,207	0/0:25,0:23:26.95:0,27,306	0/0:16,0:16:26.86:0,27,237	0/1:11,0:11:1.14:1,0,81	0/0:18,0:16:20.43:0,20,299	0/0:21,0:21:45.13:0,45,896	0/1:21,0:21:82.99:83,0,485	0/1:6,4:10:10.79:11,0,20	0/1:12,0:12:19.74:20,0,114	0/0:16,0:16:6.94:0,7,273	0/1:18,0:18:25.86:26,0,126	0/0:22,0:22:45.13:0,45,945	0/0:25,0:25:44.73:0,45,536	0/1:18,0:18:46.12:46,0,123	0/0:12,0:12:14.95:0,15,244	0/1:14,0:14:33.60:34,0,83	0/0:12,0:12:13.81:0,14,132	0/0:11,0:11:11.85:0,12,79	0/1:10,0:9:29.80:30,0,76	0/0:15,0:15:2.72:0,3,150	0/1:19,0:19:23.64:24,0,64	0/0:22,0:22:42.36:0,42,549	0/0:16,0:16:28.10:0,28,558	0/0:10,0:9:18.06:0,18,364	./.
chr10	20203963	.	G	GAAGC	2937.88	PASS	AB=1.000;AC=26;AF=0.464;AN=56;BaseQRankSum=6.239;DP=603;FS=6.587;HRun=0;HaplotypeScore=334.4921;InbreedingCoeff=0.0994;MQ=52.04;MQ0=0;MQRankSum=-2.857;QD=6.91;ReadPosRankSum=0.095;VQSLOD=1.0646;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:29:35.62:467,36,0	1/1:14,0:14:30.13:313,30,0	0/0:15,0:11:32.99:0,33,314	0/0:13,0:11:18.42:0,18,250	1/1:22,6:28:19.59:258,20,0	0/1:24,0:24:87.44:87,0,234	0/0:16,0:16:1:0,1,181	0/0:27,0:27:30.38:0,30,488	0/1:16,0:16:70.93:71,0,104	0/1:39,0:39:99:146,0,433	0/0:18,0:18:16.18:0,16,203	0/1:22,0:22:4.31:4,0,211	0/1:16,0:16:46.70:47,0,172	0/1:16,0:16:23.59:24,0,154	0/0:26,0:25:19.91:0,20,300	0/0:21,0:21:12.25:0,12,250	0/0:20,0:20:2.11:0,2,298	0/1:21,0:21:9.40:9,0,306	0/1:28,0:28:99:260,0,246	0/1:24,0:24:30.73:31,0,181	0/1:25,0:25:99:223,0,274	0/1:32,0:32:43.90:44,0,358	0/0:22,0:22:24.09:0,24,242	0/1:14,0:14:24.88:25,0,185	1/1:26,0:26:30.96:304,31,0	1/1:23,0:23:20.86:296,21,0	1/1:13,0:13:32.31:213,32,0	1/1:15,0:15:43.63:304,44,0
chr10	20205069	.	ATTT	A	4006.89	PASS	AB=0.653;AC=29;AF=0.518;AN=56;BaseQRankSum=2.710;DP=554;FS=7.448;HRun=16;HaplotypeScore=97.7576;InbreedingCoeff=0.7602;MQ=73.48;MQ0=1;MQRankSum=-1.063;QD=13.49;ReadPosRankSum=9.730;VQSLOD=1.1423;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:37:99:0,102,1382	0/0:8,0:9:24.06:0,24,362	0/0:21,0:17:26.77:0,27,293	0/0:16,0:13:20.39:0,20,210	0/0:20,0:20:48.92:0,49,610	1/1:5,8:14:1.25:203,1,0	1/1:3,17:21:43.53:481,44,0	0/0:12,0:23:46.69:0,47,622	0/0:15,0:15:39.09:0,39,538	1/1:12,11:25:41.48:405,41,0	1/1:4,10:15:11.48:141,11,0	1/1:9,11:20:2.17:233,2,0	1/1:11,6:18:17.53:186,18,0	0/1:9,5:14:6.84:143,0,7	0/0:12,0:25:47.69:0,48,385	1/1:10,9:19:14.49:188,14,0	1/1:9,15:25:35.77:358,36,0	1/1:10,12:24:15.83:406,16,0	1/1:7,12:22:31.05:366,31,0	0/1:6,10:17:3.58:128,0,4	1/1:6,4:11:11.44:107,11,0	0/1:6,10:16:2.64:173,0,3	1/1:3,9:12:7.54:119,8,0	1/1:7,15:23:35.79:372,36,0	0/0:22,0:27:53.93:0,54,754	0/0:20,0:24:30.43:0,30,578	0/0:23,0:23:51.13:0,51,737	0/0:15,0:17:51.14:0,51,785
chr10	20205117	.	AT	A	368.68	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.242;DP=539;FS=0.929;HRun=8;HaplotypeScore=65.5880;InbreedingCoeff=0.9396;MQ=84.89;MQ0=0;MQRankSum=-2.021;QD=23.04;ReadPosRankSum=0.698;VQSLOD=4.2014;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:81.18:0,81,938	0/0:3,0:3:9.03:0,9,109	0/0:18,0:18:38.88:0,39,451	0/0:18,0:17:42.09:0,42,485	0/0:14,0:14:42.12:0,42,497	0/0:15,0:15:42.13:0,42,507	0/0:23,0:23:57.12:0,57,661	0/0:35,0:35:99:0,99,1187	1/1:0,16:16:48.08:464,48,0	0/0:30,0:30:69.21:0,69,831	0/0:14,0:14:39.12:0,39,471	0/0:16,0:16:39.12:0,39,471	0/0:16,0:16:48.11:0,48,554	0/0:9,0:9:27.08:0,27,317	0/0:13,0:13:36.10:0,36,423	0/0:10,0:10:21.06:0,21,254	0/0:31,0:30:75.17:0,75,849	0/0:28,0:28:75.20:0,75,890	0/0:21,0:21:60.12:0,60,671	0/0:13,0:14:35.88:0,36,372	0/0:10,0:10:30.09:0,30,362	0/0:16,0:16:48.13:0,48,568	0/0:16,0:16:45.14:0,45,543	0/0:22,1:23:34.15:0,34,656	0/0:26,0:26:75.22:0,75,896	0/0:26,0:26:72.21:0,72,860	0/0:27,0:27:81.25:0,81,978	0/0:20,0:20:48.09:0,48,541
chr10	20205665	.	GT	G	12364.35	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-0.778;DP=593;FS=4.652;HRun=8;HaplotypeScore=107.1190;InbreedingCoeff=0.9840;MQ=67.91;MQ0=5;MQRankSum=-5.218;QD=24.98;ReadPosRankSum=3.456;VQSLOD=4.8190;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,19:21:60.09:578,60,0	1/1:0,10:10:30.05:289,30,0	0/0:42,0:25:43.69:0,44,496	0/0:40,0:26:37.43:0,37,346	1/1:3,33:36:71.18:791,71,0	1/1:3,19:22:63.09:602,63,0	1/1:4,13:18:47.09:435,47,0	1/1:13,14:27:66.09:636,66,0	1/1:4,14:18:54:498,54,0	1/1:4,22:26:69.06:655,69,0	1/1:4,20:24:60.09:579,60,0	1/1:2,14:16:42.01:395,42,0	1/1:3,22:25:69.09:660,69,0	1/1:2,10:12:32.94:297,33,0	0/0:13,0:13:36.11:0,36,433	1/1:4,16:20:57.03:535,57,0	1/1:5,18:23:62.99:582,63,0	1/1:7,10:17:32.72:300,33,0	1/1:7,13:20:51:468,51,0	1/1:3,19:22:57.08:549,57,0	1/1:2,6:8:21.03:202,21,0	1/1:4,12:16:45.06:428,45,0	1/1:3,25:28:81.12:777,81,0	1/1:1,7:8:17.91:161,18,0	1/1:1,18:19:57.09:549,57,0	1/1:3,25:28:75.12:723,75,0	1/1:7,19:26:60.09:579,60,0	1/1:2,3:5:11.93:97,12,0
chr10	20205673	.	TG	T	2495.41	PASS	AB=0.997;AC=36;AF=0.643;AN=56;BaseQRankSum=-2.105;DP=613;FS=4.890;HRun=1;HaplotypeScore=151.8742;InbreedingCoeff=-0.0745;MQ=62.01;MQ0=5;MQRankSum=-2.043;QD=4.57;ReadPosRankSum=10.108;VQSLOD=-0.2725;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:20:42.34:143,42,0	0/1:12,0:12:7.49:47,0,7	0/0:44,2:26:36.57:0,37,513	0/1:41,1:25:17.95:18,0,195	0/1:39,1:40:86.27:173,0,86	1/1:21,0:22:47.86:185,48,0	0/1:19,0:19:11.84:60,0,12	0/1:26,0:26:22.71:27,0,23	1/1:17,0:17:35.41:124,35,0	0/1:30,0:30:85.24:85,0,93	1/1:24,0:24:45.29:194,45,0	0/1:18,0:18:14.14:78,0,14	1/1:22,0:22:56.90:237,57,0	0/1:13,0:13:7.22:62,0,7	0/0:13,0:13:39.11:0,39,514	1/1:20,0:20:7.72:98,8,0	0/1:24,0:24:5.79:91,0,6	0/1:15,0:15:16.18:54,0,16	0/1:25,0:25:27.19:27,0,136	0/1:25,0:25:21.56:81,0,22	0/1:9,0:9:3.04:18,0,3	1/1:13,1:14:34.68:168,35,0	1/1:29,0:29:33.75:217,34,0	0/1:8,0:8:1.52:37,0,2	1/1:22,0:22:14.51:128,15,0	1/1:29,0:29:19.34:136,19,0	1/1:21,0:20:33.29:173,33,0	0/0:7,0:7:0.26:0,0,42
chr10	20205704	.	GT	G	12998.66	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=3.699;DP=562;FS=3.780;HRun=7;HaplotypeScore=120.0071;InbreedingCoeff=0.9823;MQ=62.92;MQ0=2;MQRankSum=-8.972;QD=26.31;ReadPosRankSum=3.320;VQSLOD=4.1274;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,13:17:36.08:367,36,0	1/1:0,9:9:27.06:275,27,0	0/0:24,0:22:28.11:0,28,413	0/0:28,0:20:32.01:0,32,369	1/1:3,34:37:93.21:947,93,0	1/1:2,17:19:51.11:520,51,0	1/1:1,16:17:51.09:510,51,0	1/1:8,19:27:57.09:572,57,0	1/1:3,16:19:51.10:513,51,0	1/1:3,33:36:99:1034,102,0	1/1:1,19:20:54.12:550,54,0	1/1:5,17:22:54.12:549,54,0	1/1:2,17:19:51.11:520,51,0	1/1:2,13:15:42.09:428,42,0	0/0:16,0:16:48.15:0,48,604	1/1:2,17:19:51.11:520,51,0	1/1:3,15:18:39.08:396,39,0	1/1:3,11:14:18.18:362,18,0	1/1:5,18:23:48.77:565,49,0	1/1:4,18:22:57.09:569,57,0	1/1:2,5:7:12.02:121,12,0	1/1:2,13:15:45.10:454,45,0	1/1:4,22:26:66.14:670,66,0	1/1:1,11:12:27.04:266,27,0	1/1:3,17:20:54.12:550,54,0	1/1:4,26:30:78.17:794,78,0	1/1:0,25:25:75.17:764,75,0	1/1:0,6:6:18.04:184,18,0
chr10	20205744	.	GT	G	10410.99	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=3.997;DP=544;FS=22.721;HRun=9;HaplotypeScore=100.0715;InbreedingCoeff=0.9789;MQ=67.31;MQ0=2;MQRankSum=-6.265;QD=21.87;ReadPosRankSum=3.437;VQSLOD=3.7174;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,14:19:42.02:384,42,0	1/1:2,11:13:30.01:274,30,0	0/0:20,0:19:31.54:0,32,335	0/0:27,0:23:42.89:0,43,450	1/1:4,28:32:63.01:576,63,0	1/1:1,12:13:33.02:302,33,0	1/1:1,14:15:42.02:384,42,0	1/1:6,20:26:63.01:572,63,0	1/1:4,18:22:19.41:432,19,0	1/1:7,30:38:93.01:845,93,0	1/1:2,19:21:54.03:494,54,0	1/1:3,20:23:54.03:494,54,0	1/1:1,7:8:21.01:192,21,0	1/1:3,14:17:10.41:350,10,0	0/0:21,0:21:57.17:0,57,657	1/1:0,17:18:47.06:417,47,0	1/1:4,11:15:30:274,30,0	1/1:2,18:20:54.02:494,54,0	1/1:3,20:23:63.03:576,63,0	1/1:2,24:26:69.03:631,69,0	1/1:1,10:11:27.01:247,27,0	1/1:2,14:16:33:302,33,0	1/1:4,17:21:42.01:384,42,0	1/1:0,12:12:27.01:247,27,0	1/1:2,14:16:42.02:384,42,0	1/1:4,18:22:54.01:494,54,0	1/1:4,17:21:48.01:439,48,0	1/1:0,8:8:24.01:220,24,0
chr10	20207498	.	G	GT	10740.27	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=11.811;DP=666;FS=0.619;HRun=7;HaplotypeScore=84.7852;InbreedingCoeff=0.9948;MQ=90.15;MQ0=0;MQRankSum=-2.536;QD=30.51;ReadPosRankSum=2.276;VQSLOD=4.8190;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:93.11:0,93,885	0/0:14,0:14:42.07:0,42,405	0/0:32,0:32:66.76:0,67,623	0/0:21,0:21:11.96:0,12,287	0/0:30,0:30:84.07:0,84,796	1/1:2,30:32:84.26:1015,84,0	1/1:1,8:9:21.06:254,21,0	0/0:21,0:21:57.06:0,57,536	0/0:32,0:32:84.13:0,84,811	1/1:4,27:31:81.25:975,81,0	1/1:2,23:25:63.10:721,63,0	1/1:1,25:26:72.22:870,72,0	1/1:3,24:27:72.18:853,72,0	1/1:2,19:21:57.17:688,57,0	0/0:24,0:24:69.08:0,69,654	1/1:3,18:22:39.12:471,39,0	1/1:2,14:16:42.10:493,42,0	1/1:4,19:23:51.16:616,51,0	1/1:3,16:19:48.14:569,48,0	1/1:3,27:30:81.25:976,81,0	1/1:0,11:11:27.08:326,27,0	1/1:3,19:22:60.18:722,60,0	1/1:2,20:23:66.20:794,66,0	1/1:3,12:15:33.10:399,33,0	0/0:25,0:25:75.12:0,75,724	0/0:34,0:34:56.89:0,57,827	0/0:30,0:30:81.13:0,81,781	0/0:15,0:15:36.04:0,36,347
chr10	20208049	.	AGT	A	2294.02	PASS	AB=0.779;AC=40;AF=0.800;AN=50;BaseQRankSum=2.762;DP=678;FS=9.054;HRun=0;HaplotypeScore=99.2463;InbreedingCoeff=0.2472;MQ=62.77;MQ0=11;MQRankSum=0.021;QD=4.51;ReadPosRankSum=2.229;VQSLOD=1.9071;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:35,5:41:10.24:76,0,10	1/1:8,3:11:6.02:65,6,0	0/0:35,0:19:0.47:0,0,1	./.	1/1:11,6:16:11.99:116,12,0	1/1:10,4:14:1.34:77,1,0	1/1:19,4:26:13.35:104,13,0	./.	0/0:26,0:25:30.03:0,30,334	1/1:22,4:25:7.26:85,7,0	1/1:8,5:14:8.82:66,9,0	1/1:14,8:22:20.79:205,21,0	1/1:15,2:17:9:86,9,0	1/1:21,3:25:11.86:111,12,0	0/0:26,3:29:3.82:0,4,357	1/1:16,6:22:17.88:175,18,0	1/1:19,9:33:35.29:297,35,0	1/1:13,4:19:14.86:135,15,0	./.	1/1:14,5:19:15.04:161,15,0	0/1:36,6:42:3.07:154,0,3	1/1:10,4:15:6.01:64,6,0	1/1:24,2:27:8.69:60,9,0	0/1:27,0:35:11.59:64,0,12	1/1:10,5:16:5.85:46,6,0	1/1:31,0:32:8.65:48,9,0	1/1:15,1:18:9.01:88,9,0	0/1:3,9:10:26.20:143,0,26
chr10	20208203	.	G	GTCTCTCTC	8144.62	PASS	AC=48;AF=0.923;AN=52;BaseQRankSum=-1.209;DP=742;FS=2.031;HRun=0;HaplotypeScore=211.5800;InbreedingCoeff=0.4000;MQ=72.15;MQ0=14;MQRankSum=-0.842;QD=13.97;ReadPosRankSum=0.945;VQSLOD=4.1527;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:26:9.03:273,9,0	1/1:15,0:15:13.77:177,14,0	./.	0/0:64,0:30:0.47:0,0,1	./.	1/1:13,5:16:5.57:171,6,0	1/1:22,2:28:3.01:122,3,0	1/1:41,0:41:33.16:656,33,0	1/1:20,2:21:6.02:216,6,0	1/1:37,0:35:48.60:1026,49,0	1/1:19,0:20:18.06:368,18,0	1/1:26,7:35:6:147,6,0	1/1:12,8:22:21.07:785,21,0	1/1:16,4:21:9.03:236,9,0	0/0:19,0:21:12.02:0,12,230	1/1:17,9:27:15.05:554,15,0	1/1:28,1:29:27.09:678,27,0	1/1:14,0:20:8.70:138,9,0	1/1:14,0:14:9.03:195,9,0	1/1:21,0:21:9.03:231,9,0	1/1:29,0:29:3.01:69,3,0	1/1:27,0:27:9.03:157,9,0	1/1:21,0:21:6.02:110,6,0	1/1:23,0:24:29.17:751,29,0	1/1:22,0:20:6.02:137,6,0	1/1:26,0:26:23.20:602,23,0	1/1:19,0:19:12.01:201,12,0	1/1:16,0:16:9:143,9,0
chr10	20208423	.	G	GTT	40.22	PASS	AC=2;AF=0.037;AN=54;BaseQRankSum=5.397;DP=596;FS=6.499;HRun=1;HaplotypeScore=151.4059;InbreedingCoeff=0.8835;MQ=70.36;MQ0=7;MQRankSum=-3.772;QD=8.04;ReadPosRankSum=-2.325;VQSLOD=-0.6539;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:26:51.10:0,51,722	./.	0/0:49,0:32:61.11:0,61,848	0/0:63,0:31:66.31:0,66,862	0/0:17,0:17:36.11:0,36,527	0/0:15,0:15:11.78:0,12,183	0/0:22,0:21:48.16:0,48,733	0/0:31,0:31:81.24:0,81,1201	0/0:21,0:21:47.97:0,48,694	0/0:26,0:26:72.24:0,72,1082	0/0:16,0:16:45.14:0,45,658	0/0:17,0:17:51.03:0,51,709	0/0:16,0:16:45.15:0,45,672	0/0:14,0:14:18.46:0,18,206	0/0:27,0:27:78.22:0,78,1164	0/0:16,0:16:36.09:0,36,506	0/0:24,0:24:63.19:0,63,932	0/0:13,1:14:35.98:0,36,497	0/0:12,0:12:35.33:0,35,495	0/0:17,0:17:35.14:0,35,468	0/0:17,0:16:17.03:0,17,271	0/0:19,0:19:34.20:0,34,544	0/0:16,0:16:17.98:0,18,269	0/0:34,0:34:50.24:0,50,766	0/0:22,0:22:54.18:0,54,824	0/0:21,0:21:60.19:0,60,889	0/0:16,0:16:40.74:0,41,626	1/1:2,3:5:9.03:123,9,0
chr10	20208438	.	CTCTCTCCCTCTCTT	C	5496.42	PASS	AB=1.000;AC=26;AF=0.464;AN=56;BaseQRankSum=-10.134;DP=646;FS=15.730;HRun=0;HaplotypeScore=262.1608;InbreedingCoeff=-0.0218;MQ=63.27;MQ0=12;MQRankSum=1.281;QD=13.67;ReadPosRankSum=0.317;VQSLOD=2.0404;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:25,1:27:15.87:598,16,0	0/0:0,9:9:0.94:0,1,2	0/0:41,0:21:3.59:0,4,208	0/0:65,0:27:4.14:0,4,342	1/1:14,0:17:14.11:242,14,0	1/1:21,0:20:2.29:22,2,0	0/1:27,0:26:99:169,0,283	0/1:32,0:30:99:466,0,154	0/1:20,0:20:99:136,0,238	0/1:27,0:25:99:402,0,316	0/1:21,0:21:74.26:74,0,205	0/1:18,0:18:99:179,0,169	0/1:22,0:22:99:224,0,121	0/0:23,0:23:32.44:0,32,318	0/0:23,0:23:66.20:0,66,2560	0/1:14,0:14:98.72:99,0,165	0/1:32,0:32:99:338,0,258	0/1:17,0:17:71.57:72,0,194	0/1:19,0:19:30.20:326,0,30	1/1:16,0:16:2.58:19,3,0	1/1:18,0:17:16.74:173,17,0	0/0:19,0:19:12.23:0,12,166	0/0:17,0:17:3.92:0,4,48	0/0:41,0:41:9.18:0,9,241	1/1:17,4:21:38.13:708,38,0	0/1:14,0:13:99:459,0,123	1/1:15,3:19:22.90:791,23,0	0/0:3,3:6:8.94:0,9,75
chr10	20208442	.	CTCCCTCTCTT	C	10073.50	PASS	AB=0.998;AC=39;AF=0.696;AN=56;BaseQRankSum=-6.044;DP=660;FS=0.000;HRun=0;HaplotypeScore=218.9803;InbreedingCoeff=0.2028;MQ=62.35;MQ0=15;MQRankSum=2.333;QD=17.28;ReadPosRankSum=-1.352;VQSLOD=3.5018;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:33,0:33:29.86:808,30,0	0/0:9,0:9:0.47:0,0,1	0/0:39,0:20:12.78:0,13,317	0/1:62,0:26:11.39:11,0,255	1/1:20,0:20:25.32:409,25,0	1/1:19,1:19:6.02:161,6,0	0/1:27,0:26:1.88:609,0,2	1/1:32,0:30:20.65:883,21,0	0/1:23,0:23:0.89:400,0,1	0/1:26,0:24:26.21:603,0,26	1/1:21,0:21:5.94:317,6,0	1/1:16,0:16:19.02:412,19,0	1/1:21,0:21:31.51:517,32,0	0/1:25,0:25:4.97:146,0,5	0/0:22,0:22:66.20:0,66,2009	1/1:14,0:14:5.90:196,6,0	0/1:34,0:34:7.12:575,0,7	0/1:16,0:16:14.76:231,0,15	1/1:21,1:21:60.69:849,61,0	1/1:2,15:17:1.70:17,2,0	1/1:18,0:17:17.46:240,17,0	0/1:18,0:18:2.25:91,0,2	1/1:17,0:17:1.09:3,1,0	1/1:38,1:39:48.12:580,48,0	1/1:22,0:22:41.55:641,42,0	0/1:18,0:17:36.47:716,0,36	1/1:20,0:20:41.68:659,42,0	0/0:7,0:6:8.75:0,9,52
chr10	20208443	.	TCC	T	7356.43	PASS	AB=1.000;AC=47;AF=0.870;AN=54;BaseQRankSum=1.599;DP=659;FS=12.324;HRun=3;HaplotypeScore=163.1159;InbreedingCoeff=0.7854;MQ=62.31;MQ0=15;MQRankSum=-1.317;QD=14.04;ReadPosRankSum=-0.214;VQSLOD=0.8127;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:33,0:33:62.16:491,62,0	./.	0/0:39,0:20:13.16:0,13,274	0/0:64,0:26:6.29:0,6,277	1/1:20,0:20:26.47:217,26,0	1/1:20,0:19:5.88:36,6,0	1/1:26,1:26:68.39:543,68,0	1/1:32,0:30:80.47:610,80,0	1/1:21,3:24:36.42:373,36,0	1/1:24,2:24:69.32:593,69,0	1/1:20,0:20:44.67:352,45,0	1/1:13,2:15:38.94:331,39,0	1/1:19,1:20:51.17:399,51,0	1/1:21,4:25:38.73:308,39,0	0/0:22,0:22:66.13:0,66,1038	1/1:9,4:13:23.94:202,24,0	1/1:31,3:34:65.88:494,66,0	1/1:15,1:16:41.80:327,42,0	1/1:22,0:21:45.17:341,45,0	0/1:17,0:17:0:0,0,0	1/1:17,0:17:15.58:120,16,0	1/1:14,3:17:14.64:124,15,0	1/1:14,2:16:2.81:19,3,0	1/1:34,6:40:53.75:440,54,0	1/1:22,0:22:38.59:316,39,0	1/1:20,0:19:39.13:450,39,0	1/1:20,0:20:36.46:255,36,0	1/1:7,0:6:5.15:15,5,0
chr10	20208444	.	CCCTCTCTT	C	12959.86	PASS	AB=1.000;AC=46;AF=0.821;AN=56;BaseQRankSum=-4.390;DP=652;FS=1.112;HRun=0;HaplotypeScore=191.7161;InbreedingCoeff=0.6351;MQ=62.41;MQ0=16;MQRankSum=1.668;QD=22.58;ReadPosRankSum=-0.794;VQSLOD=4.2746;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:32,0:32:41.39:848,41,0	0/0:9,0:9:0.47:0,0,1	0/0:39,0:20:13.24:0,13,307	0/1:63,0:25:6.56:7,0,218	1/1:21,0:21:28.84:431,29,0	1/1:2,18:19:6.02:134,6,0	1/1:26,1:26:39.95:898,40,0	1/1:31,0:29:45.14:930,45,0	1/1:23,1:24:51.76:608,52,0	1/1:25,0:23:61.41:829,61,0	1/1:18,1:19:43.14:547,43,0	1/1:14,1:15:38.57:539,39,0	1/1:20,0:20:50.09:663,50,0	1/1:23,1:24:34.82:477,35,0	0/0:23,0:23:68.99:0,69,1775	1/1:12,0:12:23.47:361,23,0	1/1:34,0:34:51.44:802,51,0	1/1:16,1:17:33.61:503,34,0	1/1:2,20:21:63.10:880,63,0	1/1:16,1:17:1.61:17,2,0	1/1:17,0:16:17.52:240,18,0	1/1:15,0:15:14.07:173,14,0	1/1:2,14:16:2.24:37,2,0	1/1:38,1:39:56.13:869,56,0	1/1:22,0:22:44.66:647,45,0	0/1:22,0:21:1.13:895,0,1	1/1:20,0:20:44.57:624,45,0	0/0:7,0:6:8.32:0,8,42
chr10	20208448	.	CTCTT	C	6853.41	PASS	AB=1.000;AC=49;AF=0.875;AN=56;BaseQRankSum=2.190;DP=638;FS=7.675;HRun=0;HaplotypeScore=176.7973;InbreedingCoeff=0.7030;MQ=59.51;MQ0=18;MQRankSum=1.576;QD=13.05;ReadPosRankSum=1.029;VQSLOD=4.1001;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:30:46.43:416,46,0	0/1:9,0:9:0:0,0,0	0/0:32,0:17:25.86:0,26,366	0/0:55,0:22:4.72:0,5,232	1/1:20,0:20:23.84:197,24,0	1/1:20,0:19:5.96:45,6,0	1/1:24,1:24:43.19:462,43,0	1/1:28,0:26:59.06:447,59,0	1/1:20,3:23:43.56:367,44,0	1/1:27,0:24:65.45:593,65,0	1/1:19,0:19:39.33:316,39,0	1/1:14,1:15:31.49:339,31,0	1/1:17,1:18:26.83:313,27,0	1/1:22,3:25:39.23:324,39,0	0/0:23,0:23:66.09:0,66,1144	1/1:8,4:12:23.94:221,24,0	1/1:30,3:32:43.09:432,43,0	1/1:15,1:16:37.57:295,38,0	1/1:22,0:21:47.44:377,47,0	1/1:17,0:17:1.76:17,2,0	1/1:17,0:16:13.44:104,13,0	1/1:13,2:15:14.83:148,15,0	1/1:14,2:16:2.47:26,2,0	1/1:34,6:40:53.50:452,53,0	1/1:25,0:25:27.74:261,28,0	1/1:23,0:22:5.23:420,5,0	1/1:22,0:22:28.77:280,29,0	1/1:8,0:7:0.47:2,0,0
chr10	20208450	.	CTT	C	7139.78	PASS	AB=0.983;AC=49;AF=0.907;AN=54;BaseQRankSum=3.357;DP=640;FS=12.509;HRun=3;HaplotypeScore=160.2402;InbreedingCoeff=0.5960;MQ=58.89;MQ0=19;MQRankSum=0.088;QD=12.37;ReadPosRankSum=1.436;VQSLOD=0.8201;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:31,0:31:56.24:454,56,0	./.	0/0:30,0:17:15.95:0,16,290	0/1:57,0:22:20.35:20,0,220	1/1:20,0:20:26.91:213,27,0	1/1:20,0:19:5.88:36,6,0	1/1:25,0:24:62.40:489,62,0	1/1:27,0:25:74.32:541,74,0	1/1:22,0:22:43.62:345,44,0	1/1:25,2:24:68.45:576,68,0	1/1:19,0:19:39.37:302,39,0	1/1:16,1:17:44.91:373,45,0	1/1:19,0:19:30.81:320,31,0	1/1:24,1:25:45.15:347,45,0	0/0:23,0:23:55.44:0,55,854	1/1:13,0:13:26.92:222,27,0	1/1:32,0:31:58.08:439,58,0	1/1:15,0:16:37.35:277,37,0	1/1:22,0:21:55.88:427,56,0	1/1:17,0:17:1.78:17,2,0	1/1:16,0:16:13.85:105,14,0	1/1:14,1:15:14.63:123,15,0	1/1:16,0:16:2.71:18,3,0	1/1:40,0:40:53.20:434,53,0	1/1:26,0:26:35.43:301,35,0	1/1:23,0:22:43.88:465,44,0	1/1:22,0:22:40.83:278,41,0	1/1:6,0:7:5.50:15,6,0
chr10	20210194	.	A	AT	630.15	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-6.156;DP=648;FS=1.711;HRun=8;HaplotypeScore=58.4272;InbreedingCoeff=0.9813;MQ=75.78;MQ0=0;MQRankSum=0.500;QD=26.26;ReadPosRankSum=0.789;VQSLOD=4.4225;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:53.98:0,54,487	0/0:13,0:13:30.01:0,30,275	0/0:12,0:14:26.04:0,26,223	0/0:10,0:10:27.01:0,27,247	0/0:35,0:35:93.05:0,93,851	0/0:28,0:28:78.04:0,78,714	0/0:21,0:21:60.02:0,60,544	0/0:37,0:37:99:0,99,906	1/1:2,22:24:63.19:725,63,0	0/0:45,0:45:99:0,120,1096	0/0:33,0:33:87.04:0,87,796	0/0:21,0:21:57.03:0,57,522	0/0:17,0:17:47.99:0,48,429	0/0:23,0:23:57.03:0,57,522	0/0:22,0:22:36.39:0,36,498	0/0:18,1:19:19.38:0,19,423	0/0:17,0:17:48.02:0,48,439	0/0:22,0:22:57.02:0,57,522	0/0:25,0:25:57.02:0,57,522	0/0:40,0:40:99:0,114,1039	0/0:13,0:13:27.01:0,27,247	0/0:18,0:18:54:0,54,485	0/0:28,0:28:81.04:0,81,741	0/0:11,0:11:27.01:0,27,247	0/0:17,0:17:48.01:0,48,433	0/0:30,0:30:81.02:0,81,738	0/0:36,0:36:99:0,105,941	0/0:9,0:9:18.01:0,18,165
chr10	20210710	.	GA	G	4498.92	PASS	AB=0.909;AC=17;AF=0.304;AN=56;BaseQRankSum=-14.708;DP=717;FS=4.344;HRun=9;HaplotypeScore=105.2882;InbreedingCoeff=0.9230;MQ=80.91;MQ0=0;MQRankSum=-1.597;QD=21.02;ReadPosRankSum=-0.463;VQSLOD=4.5232;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,24:25:63.03:577,63,0	1/1:1,10:11:27.01:247,27,0	0/0:25,0:25:43.67:0,44,477	0/1:18,1:20:9.85:10,0,173	1/1:2,31:33:84.03:768,84,0	0/0:34,0:34:97.87:0,98,667	0/0:23,0:23:55.61:0,56,345	1/1:5,31:36:76.18:826,76,0	0/0:22,0:22:62.19:0,62,408	0/0:37,0:37:98.86:0,99,561	0/0:21,0:21:53.27:0,53,346	0/0:23,0:23:65.23:0,65,454	0/0:26,0:26:70.98:0,71,458	0/0:27,0:27:68.17:0,68,462	0/0:27,0:27:78.23:0,78,900	0/0:26,0:26:70.96:0,71,467	0/0:26,0:26:71.07:0,71,467	0/0:21,1:22:31.68:0,32,331	0/0:23,0:23:58.80:0,59,379	0/0:43,0:43:97.79:0,98,661	0/0:28,0:28:68.13:0,68,452	0/0:19,0:19:53.21:0,53,360	0/0:22,0:22:62.19:0,62,414	0/0:29,0:29:85.90:0,86,564	1/1:0,15:15:39.02:357,39,0	1/1:2,23:25:55.99:616,56,0	1/1:3,26:29:69.03:631,69,0	1/1:0,20:20:51.03:467,51,0
chr10	20211203	.	T	TCA	718.15	PASS	AB=1.000;AC=19;AF=0.432;AN=44;BaseQRankSum=5.083;DP=592;FS=7.636;HRun=0;HaplotypeScore=135.0279;InbreedingCoeff=0.4929;MQ=65.98;MQ0=4;MQRankSum=-1.214;QD=3.47;ReadPosRankSum=-3.802;VQSLOD=1.0758;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:41,0:40:23.76:217,24,0	1/1:8,0:7:6:52,6,0	./.	./.	0/1:12,0:12:0.34:0,0,1	./.	0/0:21,0:21:8.69:0,9,96	./.	0/1:21,0:23:35.71:36,0,64	0/0:18,0:17:1.54:0,2,29	1/1:12,0:12:5.69:55,6,0	0/0:22,0:22:15.03:0,15,160	0/0:22,0:22:15.03:0,15,162	0/0:13,0:13:3:0,3,33	0/0:19,0:26:14.20:0,14,70	1/1:13,12:27:6.02:89,6,0	0/0:28,0:31:26.56:0,27,235	0/1:20,0:20:18.60:19,0,158	./.	0/0:23,0:23:3:0,3,32	./.	0/0:22,0:22:3:0,3,32	0/0:13,0:13:6:0,6,56	0/0:27,0:30:7.18:0,7,173	1/1:16,0:16:3:26,3,0	1/1:24,0:22:16.31:143,16,0	1/1:18,0:20:18.90:174,19,0	1/1:4,0:4:5.99:62,6,0
chr10	20213691	.	TCTGTGGAGTACATC	T	39043.64	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=14.986;DP=549;FS=1.906;HRun=0;HaplotypeScore=281.3500;InbreedingCoeff=0.9894;MQ=85.94;MQ0=0;MQRankSum=-14.668;QD=87.94;ReadPosRankSum=7.682;VQSLOD=3.9896;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:14,30:44:81.25:3093,81,0	1/1:3,6:9:18.06:778,18,0	0/0:32,0:32:87.29:0,87,5215	0/0:20,0:20:60.17:0,60,3471	1/1:2,9:11:21.07:798,21,0	1/1:3,18:21:45.15:1946,45,0	1/1:7,13:20:39.13:1630,39,0	0/0:28,0:28:81.28:0,81,5155	1/1:4,19:23:60.21:2592,60,0	1/1:2,26:28:74.88:2936,75,0	1/1:1,9:10:27.09:1089,27,0	1/1:3,24:27:63.22:2724,63,0	1/1:4,6:11:21.07:827,21,0	1/1:7,22:29:63.22:2723,63,0	0/0:25,0:25:72.25:0,72,4783	1/1:7,17:24:39.30:1687,39,0	1/1:6,11:17:33.11:1427,33,0	1/1:5,10:15:30.10:1298,30,0	1/1:4,11:15:33.11:1346,33,0	1/1:1,9:10:27.09:1063,27,0	1/1:7,14:22:35.94:1544,36,0	1/1:3,14:17:36.12:1532,36,0	1/1:1,9:10:24.08:1038,24,0	1/1:6,15:21:36.12:1537,36,0	1/1:1,17:18:48.16:1995,48,0	1/1:3,14:17:39.09:1495,39,0	1/1:4,12:16:30.10:1297,30,0	1/1:4,5:9:15.05:649,15,0
chr10	20213894	.	G	GCTCTC	11443.12	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-11.575;DP=759;FS=1.143;HRun=0;HaplotypeScore=134.4176;InbreedingCoeff=0.9973;MQ=86.72;MQ0=0;MQRankSum=-8.089;QD=69.78;ReadPosRankSum=2.501;VQSLOD=6.3165;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,29:38:78.27:2380,78,0	1/1:0,12:12:33.11:1010,33,0	0/0:32,0:33:84.28:0,84,1624	0/0:29,0:29:53.05:0,53,1020	1/1:4,16:21:45.11:1300,45,0	0/0:26,0:26:66.18:0,66,1199	0/0:28,0:27:78.21:0,78,1499	0/0:38,0:38:81.14:0,81,1454	0/0:26,0:26:72.25:0,72,1426	0/0:25,0:25:75.24:0,75,1462	0/0:13,0:13:39.13:0,39,808	0/0:34,0:34:96.30:0,96,1885	0/0:30,0:30:78.18:0,78,1541	0/0:29,0:29:84.27:0,84,1629	0/0:37,0:37:98.95:0,99,1835	0/0:20,0:20:57.13:0,57,1028	0/0:52,0:52:99:0,138,2752	0/0:20,0:20:57.14:0,57,1100	0/0:26,0:26:72.02:0,72,1371	0/0:27,0:27:75.26:0,75,1527	0/0:28,0:28:78.27:0,78,1581	0/0:27,0:27:78.20:0,78,1495	0/0:15,0:15:42.14:0,42,846	0/0:32,0:32:93.25:0,93,1789	1/1:0,16:16:36.12:1100,36,0	1/1:5,22:27:16.09:2182,16,0	1/1:5,30:35:90.31:2736,90,0	1/1:1,12:13:24.08:736,24,0
chr10	20214375	.	CCT	C	966.20	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=0.921;DP=678;FS=0.736;HRun=0;HaplotypeScore=109.5216;InbreedingCoeff=0.9995;MQ=95.90;MQ0=0;MQRankSum=-0.551;QD=30.19;ReadPosRankSum=-3.821;VQSLOD=3.9396;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,141,2375	0/0:13,0:13:36.12:0,36,597	0/0:30,0:30:84.07:0,84,1285	0/0:35,0:35:82.45:0,82,1356	0/0:17,0:17:45.15:0,45,764	0/0:16,0:16:45.15:0,45,758	0/0:35,0:35:99:0,99,1640	1/1:4,28:32:81.26:1061,81,0	0/0:22,0:22:63.22:0,63,1080	0/0:28,0:28:72.25:0,72,1229	0/0:14,0:14:42.13:0,42,687	0/0:26,0:26:78.27:0,78,1338	0/0:23,0:23:63.21:0,63,1063	0/0:19,0:19:51.17:0,51,874	0/0:23,0:23:63.20:0,63,1045	0/0:25,0:25:72.25:0,72,1235	0/0:29,0:29:84.26:0,84,1397	0/0:20,0:20:57.16:0,57,946	0/0:24,0:24:69.24:0,69,1168	0/0:26,0:26:75.26:0,75,1259	0/0:25,0:25:66.21:0,66,1105	0/0:16,0:16:36.12:0,36,596	0/0:14,0:14:36.12:0,36,617	0/0:28,0:28:69.24:0,69,1169	0/0:19,0:19:51.17:0,51,861	0/0:27,0:27:66.23:0,66,1123	0/0:22,0:21:63.21:0,63,1067	0/0:20,0:20:57.20:0,57,977
chr10	20215013	.	G	GA	5231.87	PASS	AB=0.832;AC=38;AF=0.679;AN=56;BaseQRankSum=-5.554;DP=586;FS=3.585;HRun=13;HaplotypeScore=64.3111;InbreedingCoeff=0.5452;MQ=69.21;MQ0=0;MQRankSum=0.068;QD=12.08;ReadPosRankSum=-1.736;VQSLOD=4.3214;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:42:61.07:0,61,504	0/0:11,0:11:23.79:0,24,164	0/1:25,1:21:30.29:30,0,39	0/1:15,0:8:11.30:11,0,48	0/0:26,0:28:40.58:0,41,271	0/1:6,12:20:2.35:241,0,2	1/1:7,13:22:35.72:307,36,0	1/1:4,0:28:72.05:425,72,0	1/1:2,8:11:20.86:182,21,0	1/1:7,11:22:35.37:275,35,0	1/1:5,10:15:6.41:194,6,0	1/1:5,13:18:19.27:170,19,0	1/1:7,12:20:23.21:243,23,0	1/1:4,13:18:29.87:265,30,0	0/0:20,0:21:40.57:0,41,272	1/1:2,14:16:33.04:306,33,0	1/1:5,25:32:63.27:702,63,0	1/1:5,17:24:35.97:434,36,0	1/1:10,9:20:35.55:294,36,0	1/1:10,13:24:2.23:269,2,0	1/1:2,7:12:7.29:167,7,0	1/1:4,7:12:11.17:133,11,0	0/1:4,11:16:0.71:160,0,1	1/1:3,18:22:42.04:387,42,0	0/1:22,5:27:31.07:31,0,233	0/0:24,3:27:19.56:0,20,280	0/0:22,0:23:25.83:0,26,290	0/1:9,0:10:3.22:3,0,71
chr10	20215397	.	GTCTC	G	629.94	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=0.478;DP=533;FS=0.000;HRun=0;HaplotypeScore=138.2658;InbreedingCoeff=0.4404;MQ=50.70;MQ0=44;MQRankSum=-1.760;QD=19.09;ReadPosRankSum=-3.777;VQSLOD=2.8094;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:27:24.52:0,25,321	0/0:6,0:6:11.05:0,11,106	0/0:14,0:5:3:0,3,25	0/0:27,0:16:5.48:0,5,41	0/0:14,0:14:6.02:0,6,97	0/0:22,0:18:17.95:0,18,189	0/0:30,0:28:15.01:0,15,196	1/1:12,20:30:23.84:722,24,0	0/0:12,0:11:9:0,9,81	0/0:15,0:14:22.10:0,22,469	0/0:10,0:9:6.02:0,6,115	0/0:20,0:19:21:0,21,206	0/0:16,0:14:27.02:0,27,345	0/0:12,0:10:6.02:0,6,88	0/0:18,0:16:36.05:0,36,848	0/0:18,0:14:30.07:0,30,410	0/0:27,0:25:46.75:0,47,618	0/0:29,0:27:25.96:0,26,547	0/0:18,0:16:36.06:0,36,497	0/0:17,0:16:14.98:0,15,158	0/0:31,0:29:15.02:0,15,157	0/0:15,0:14:21.04:0,21,270	0/0:14,0:11:15.04:0,15,243	0/0:24,0:23:3.01:0,3,57	0/0:17,0:16:12:0,12,125	0/0:22,0:21:38.60:0,39,413	0/0:13,0:13:14.95:0,15,133	0/0:8,0:8:5.72:0,6,34
chr10	20215409	.	GTC	G	2825.78	PASS	AB=0.804;AC=37;AF=0.740;AN=50;BaseQRankSum=-3.612;DP=483;FS=18.573;HRun=0;HaplotypeScore=140.3797;InbreedingCoeff=0.2420;MQ=41.84;MQ0=51;MQRankSum=3.892;QD=7.32;ReadPosRankSum=4.452;VQSLOD=1.9355;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,9:24:11.92:157,12,0	1/1:2,4:6:5.57:67,6,0	./.	0/1:10,0:2:0:0,0,0	./.	1/1:13,7:15:3.01:34,3,0	0/0:5,14:17:0:0,0,0	0/0:32,0:27:43.21:0,43,247	1/1:11,7:16:6.04:113,6,0	0/1:12,4:14:22.68:230,0,23	./.	1/1:13,7:18:9.03:111,9,0	0/1:13,2:12:0.18:51,0,0	1/1:10,5:12:6:63,6,0	0/0:16,0:14:30.02:0,30,502	1/1:15,3:14:13.18:220,13,0	1/1:17,8:23:26.81:295,27,0	1/1:18,11:27:14.21:549,14,0	0/1:15,4:18:0.06:206,0,0	1/1:8,8:15:9.03:112,9,0	1/1:4,24:26:9.03:116,9,0	1/1:7,6:11:14.98:160,15,0	1/1:12,2:11:2.87:15,3,0	1/1:22,2:23:2.96:20,3,0	1/1:4,11:13:5.69:50,6,0	0/1:19,0:15:17.58:260,0,18	0/1:3,10:13:0.70:107,0,1	0/1:0,4:5:0.64:19,0,1
chr10	20215413	.	CTCTCTG	C	5470.91	PASS	AB=0.647;AC=45;AF=0.938;AN=48;BaseQRankSum=-1.223;DP=475;FS=16.973;HRun=0;HaplotypeScore=159.5887;InbreedingCoeff=0.2793;MQ=40.42;MQ0=54;MQRankSum=-0.206;QD=12.87;ReadPosRankSum=-0.582;VQSLOD=2.8057;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:23:11.32:227,11,0	1/1:6,0:6:7.27:106,7,0	./.	./.	./.	1/1:17,0:12:2.74:52,3,0	1/1:21,0:18:0.72:1,1,0	1/1:29,0:24:4.40:111,4,0	1/1:20,0:18:20.51:263,21,0	1/1:16,0:14:11.66:432,12,0	./.	1/1:21,0:19:14.38:201,14,0	1/1:14,0:11:12.39:119,12,0	1/1:16,0:13:6:87,6,0	0/0:16,0:13:30.10:0,30,680	1/1:18,0:14:23.67:403,24,0	1/1:23,0:21:15.08:493,15,0	1/1:30,0:28:64.88:973,65,0	1/1:18,0:16:34.29:521,34,0	1/1:15,0:14:9.03:155,9,0	1/1:27,0:25:9.03:191,9,0	1/1:13,0:11:15.03:256,15,0	1/1:13,0:10:3.01:38,3,0	1/1:25,0:24:2.71:20,3,0	1/1:14,0:12:6.01:92,6,0	0/1:10,12:18:20.26:447,0,20	1/1:15,0:15:20.99:244,21,0	1/1:5,0:5:0.21:38,0,0
chr10	20215421	.	CTG	C	2936.31	PASS	AB=1.000;AC=42;AF=0.875;AN=48;BaseQRankSum=-0.463;DP=461;FS=8.268;HRun=0;HaplotypeScore=160.5236;InbreedingCoeff=0.2547;MQ=38.06;MQ0=52;MQRankSum=0.263;QD=6.97;ReadPosRankSum=1.100;VQSLOD=2.6518;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:23:8.86:72,9,0	1/1:5,0:5:5.88:36,6,0	./.	./.	0/1:14,0:13:0:0,0,0	1/1:12,8:15:2.96:19,3,0	1/1:17,1:15:0.67:2,1,0	1/1:23,0:18:36.17:219,36,0	1/1:11,11:20:23.91:247,24,0	1/1:10,3:11:30.35:290,30,0	./.	1/1:10,12:20:17.85:167,18,0	1/1:5,7:9:11.98:140,12,0	1/1:14,3:14:5.98:47,6,0	0/0:18,0:15:25.64:0,26,214	1/1:14,2:12:17.94:162,18,0	1/1:21,3:21:38.16:315,38,0	1/1:22,5:25:64.31:526,64,0	1/1:9,9:16:31.49:305,31,0	1/1:10,4:13:5.94:42,6,0	1/1:24,0:22:8.98:73,9,0	1/1:16,0:14:11.69:81,12,0	./.	1/1:9,18:26:6.01:58,6,0	1/1:15,0:13:5.83:38,6,0	0/1:25,0:20:32.42:133,0,32	0/1:15,0:14:25.80:74,0,26	0/1:6,0:6:6.50:13,0,6
chr10	20215427	.	C	CTG	384.51	PASS	AB=0.973;AC=12;AF=0.240;AN=50;BaseQRankSum=4.140;DP=495;FS=6.548;HRun=0;HaplotypeScore=189.9725;InbreedingCoeff=-0.0137;MQ=38.06;MQ0=62;MQRankSum=-2.073;QD=1.84;ReadPosRankSum=1.084;VQSLOD=2.1391;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:31,1:26:19.95:27,0,20	0/1:5,0:5:11.05:25,0,11	./.	./.	0/1:18,0:15:0.01:0,0,0	0/0:22,0:16:5.19:0,5,27	0/0:21,0:18:2.20:0,2,8	0/0:25,0:20:43.73:0,44,187	0/0:26,0:24:9.42:0,9,97	0/0:11,0:9:18.60:0,19,119	./.	0/1:20,0:18:0.33:0,0,50	0/1:14,0:9:13.35:13,0,17	0/0:18,0:14:7.60:0,8,50	0/0:18,0:15:29.49:0,29,191	0/0:16,0:12:5.79:0,6,38	0/1:25,0:22:29.79:30,0,125	0/0:25,0:23:25.93:0,26,236	0/0:22,0:19:39.58:0,40,271	0/0:16,0:15:3:0,3,25	0/0:22,0:20:8.98:0,9,74	0/0:20,0:18:11.30:0,11,77	0/0:14,0:11:2.37:0,2,8	0/1:29,0:28:3.03:3,0,10	1/1:19,1:18:5.85:49,6,0	0/1:24,1:20:10.99:197,0,11	0/1:12,4:14:8:162,0,8	0/1:5,0:4:3.37:3,0,20
chr10	20215429	.	C	CTG	1245.47	PASS	AB=0.966;AC=24;AF=0.480;AN=50;BaseQRankSum=-0.078;DP=500;FS=0.000;HRun=0;HaplotypeScore=186.6826;InbreedingCoeff=-0.2800;MQ=38.08;MQ0=63;MQRankSum=-3.140;QD=3.07;ReadPosRankSum=-0.260;VQSLOD=2.6829;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:31,0:25:31.20:53,0,31	0/1:5,0:5:10.17:16,0,10	./.	./.	0/1:17,0:14:0.01:0,0,0	1/1:22,0:16:2.30:22,2,0	1/1:22,0:19:8.87:70,9,0	0/1:25,0:20:6.64:7,0,155	0/1:25,1:24:30.77:120,0,31	0/1:13,0:11:54.15:54,0,90	./.	0/1:21,0:19:20.43:97,0,20	0/1:13,0:8:3.13:95,0,3	0/1:19,0:15:6.54:33,0,7	0/0:18,0:15:32.90:0,33,266	0/1:10,5:11:8.81:47,0,9	0/1:17,9:23:99:170,0,104	0/1:23,0:21:99:141,0,111	0/1:22,0:19:99:144,0,112	0/0:17,0:16:2.32:0,2,18	0/0:22,2:22:8.86:0,9,56	0/0:9,10:17:8.02:0,8,49	1/1:16,0:13:2.97:24,3,0	1/1:26,3:28:14.89:191,15,0	0/1:20,0:18:15.97:18,0,16	0/1:25,0:20:60.55:61,0,90	0/1:16,0:14:28.76:29,0,55	0/0:7,0:5:7.45:0,7,48
chr10	20215433	.	C	CTG	1021.27	PASS	AB=0.997;AC=24;AF=0.480;AN=50;BaseQRankSum=2.599;DP=504;FS=1.241;HRun=0;HaplotypeScore=195.2629;InbreedingCoeff=-0.1211;MQ=38.46;MQ0=62;MQRankSum=0.450;QD=2.77;ReadPosRankSum=2.457;VQSLOD=2.8409;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:31,1:27:16.23:95,16,0	1/1:4,0:4:3.73:17,4,0	./.	./.	0/1:16,0:13:0.01:0,0,0	0/0:24,0:18:8.83:0,9,68	0/0:24,0:21:11.74:0,12,90	0/0:25,0:20:46.55:0,47,310	0/1:26,0:24:45.51:46,0,52	0/1:13,0:11:20.04:20,0,89	./.	0/1:20,0:18:21.53:43,0,22	0/1:13,0:8:9.88:25,0,10	0/1:20,0:16:12.08:12,0,54	0/0:16,0:13:26.92:0,27,219	0/1:15,0:11:17.94:18,0,18	1/1:27,0:24:33.47:193,33,0	0/1:23,0:22:70.06:132,0,70	0/1:22,0:19:71.76:119,0,72	0/1:20,0:19:13.55:14,0,38	0/1:24,0:22:49.98:50,0,56	0/0:18,0:16:5.67:0,6,40	0/0:18,0:15:5.97:0,6,45	0/1:28,0:27:4.78:5,0,34	1/1:18,1:17:8.85:63,9,0	0/1:22,1:18:8.33:126,0,8	1/1:13,4:15:4.91:150,5,0	0/1:7,0:5:21.24:51,0,21
chr10	20215668	.	G	GCAGCA	46785.59	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-13.517;DP=861;FS=1.215;HRun=0;HaplotypeScore=140.0873;InbreedingCoeff=0.9912;MQ=86.69;MQ0=0;MQRankSum=-10.634;QD=64.62;ReadPosRankSum=7.592;VQSLOD=5.5573;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,52:64:99:3931,129,0	1/1:0,7:7:15.05:456,15,0	0/0:31,0:31:72.14:0,72,1405	0/0:39,0:40:86.28:0,86,1571	1/1:5,20:26:39.13:1190,39,0	1/1:8,27:35:72.25:2196,72,0	1/1:11,21:33:78.27:2315,78,0	0/0:30,0:30:78.26:0,78,1532	1/1:3,28:34:75.21:2287,75,0	1/1:6,27:34:87.30:2607,87,0	1/1:5,21:26:51.18:1541,51,0	1/1:7,30:38:81.28:2429,81,0	1/1:8,29:38:81.28:2448,81,0	1/1:4,27:33:75.26:2272,75,0	0/0:36,0:36:99:0,102,2029	1/1:4,26:31:69.24:2085,69,0	1/1:8,31:40:87.30:2653,87,0	1/1:2,25:27:63.22:1923,63,0	1/1:9,15:25:54.61:1420,55,0	1/1:4,20:24:54.19:1645,54,0	1/1:12,26:40:60.20:1809,60,0	1/1:6,18:24:45.15:1372,45,0	1/1:1,20:22:45.14:1368,45,0	1/1:3,41:44:99:3290,109,0	1/1:1,18:21:45.15:1373,45,0	1/1:7,25:32:81.23:2327,81,0	1/1:3,17:20:48.12:1390,48,0	1/1:0,5:5:15.05:458,15,0
chr10	20216560	.	TCACACACACACACACA	T	2328.83	PASS	AB=1.000;AC=21;AF=0.500;AN=42;BaseQRankSum=4.755;DP=471;FS=2.254;HRun=0;HaplotypeScore=194.7613;InbreedingCoeff=0.7257;MQ=55.15;MQ0=19;MQRankSum=-6.011;QD=13.62;ReadPosRankSum=-0.151;VQSLOD=2.7331;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:35:45.15:0,45,1393	0/0:16,0:16:23.41:0,23,1165	0/0:12,0:4:0:0,0,0	./.	0/0:15,0:15:24.08:0,24,787	1/1:6,11:18:12.04:492,12,0	./.	0/1:14,0:13:0:1,0,0	0/0:25,0:25:24.38:0,24,584	1/1:11,5:16:15:465,15,0	./.	1/1:7,9:16:9.03:393,9,0	1/1:16,0:16:3.01:125,3,0	1/1:13,0:13:6.02:249,6,0	0/0:21,0:21:27.09:0,27,1667	1/1:13,0:13:3.48:125,3,0	./.	1/1:4,3:7:9.03:365,9,0	1/1:8,1:8:3:133,3,0	1/1:11,9:19:3.01:132,3,0	1/1:27,0:24:0.47:1,0,0	./.	./.	./.	0/0:14,0:15:21.96:0,22,773	0/0:24,0:23:48.16:0,48,1639	0/0:16,0:16:36.10:0,36,1025	0/0:14,0:13:33.11:0,33,1024
chr10	20216577	.	CACACACACACACACACAGAGAG	C	2762.62	PASS	AB=1.000;AC=22;AF=0.524;AN=42;BaseQRankSum=6.005;DP=539;FS=25.972;HRun=0;HaplotypeScore=218.1063;InbreedingCoeff=0.3212;MQ=39.47;MQ0=28;MQRankSum=-7.564;QD=10.01;ReadPosRankSum=-0.886;VQSLOD=1.2206;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:46:44:0,44,1447	0/1:19,0:18:36.88:37,0,1139	./.	./.	0/0:20,0:20:24.55:0,25,788	1/1:16,0:15:12.04:492,12,0	./.	./.	0/0:24,0:24:11.36:0,11,544	1/1:17,0:15:14.70:465,15,0	./.	1/1:26,0:23:17.99:533,18,0	1/1:6,0:16:2.44:163,2,0	1/1:5,12:18:6.02:351,6,0	0/0:23,0:23:36.59:0,37,2076	1/1:10,12:21:3.48:186,3,0	0/0:10,14:23:5.06:0,5,22	0/1:12,0:11:65.06:353,0,65	0/1:12,0:10:99:127,0,105	1/1:21,0:18:5.53:179,6,0	1/1:13,15:22:0.47:1,0,0	./.	./.	1/1:17,0:38:2.34:6,2,0	0/0:17,0:17:21.96:0,22,773	0/1:26,0:25:14.79:15,0,2028	0/0:22,0:18:0.08:0,0,1082	0/0:14,0:13:0.08:0,0,1004
chr10	20216593	.	CAGAGAGAG	C	2226.88	PASS	AB=0.977;AC=39;AF=0.780;AN=50;BaseQRankSum=1.167;DP=545;FS=26.144;HRun=0;HaplotypeScore=151.0308;InbreedingCoeff=0.3703;MQ=40.35;MQ0=27;MQRankSum=1.662;QD=4.84;ReadPosRankSum=0.304;VQSLOD=0.9685;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:48,0:46:0:0,0,0	1/1:14,0:13:6.02:111,6,0	./.	./.	0/1:19,0:19:0:0,0,0	1/1:18,0:17:8.24:74,8,0	1/1:24,0:23:15.04:205,15,0	0/0:8,0:7:2.22:0,2,7	1/1:27,0:27:2.29:55,2,0	0/1:19,1:18:53.16:157,0,53	0/0:7,0:7:0.47:0,0,1	1/1:31,1:30:24.13:481,24,0	1/1:17,0:16:2.83:87,3,0	1/1:17,0:18:6.02:104,6,0	0/0:25,0:25:14.70:0,15,182	1/1:22,1:22:2.80:47,3,0	0/0:23,0:22:5.24:0,5,33	1/1:13,0:12:6.78:80,7,0	1/1:11,2:12:6.02:147,6,0	1/1:17,0:16:5.53:103,6,0	1/1:25,0:20:0.89:2,1,0	1/1:22,0:18:3.01:70,3,0	1/1:15,0:13:9.03:195,9,0	1/1:35,0:32:0.47:1,0,0	./.	1/1:20,1:20:14.15:203,14,0	1/1:20,0:16:5.60:111,6,0	1/1:12,0:11:6.02:111,6,0
chr10	20216615	.	GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAC	G	428.34	PASS	AB=0.942;AC=6;AF=0.107;AN=56;BaseQRankSum=3.767;DP=622;FS=10.622;HRun=0;HaplotypeScore=287.1649;InbreedingCoeff=-0.0995;MQ=43.54;MQ0=28;MQRankSum=-2.251;QD=3.79;ReadPosRankSum=1.475;VQSLOD=1.1652;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:47:21.40:0,21,643	0/1:13,0:12:91.96:92,0,159	0/0:13,0:3:8.92:0,9,243	0/0:20,0:2:3.01:0,3,176	0/0:21,0:20:2.50:0,2,6	0/0:19,0:18:23.05:0,23,1541	0/0:35,0:33:42.14:0,42,3615	0/0:11,0:10:27.09:0,27,1139	0/1:13,15:28:15.25:243,0,15	0/0:31,0:29:87.16:0,87,5102	0/0:10,0:10:6.49:0,6,510	0/0:36,0:33:55.17:0,55,4047	0/0:19,0:16:15.52:0,16,725	0/0:21,0:21:15.05:0,15,763	0/0:25,0:24:39.61:0,40,3812	0/0:26,0:25:11.60:0,12,778	0/0:28,0:27:25.12:0,25,1176	0/0:12,0:11:26.95:0,27,1321	0/0:10,0:10:30.10:0,30,1075	0/0:18,0:16:15.99:0,16,852	0/0:25,0:21:2.68:0,3,17	0/0:26,0:23:24.08:0,24,2028	0/0:18,0:16:21.07:0,21,1859	0/0:36,0:34:7.80:0,8,944	0/1:20,0:20:24.46:24,0,48	0/1:20,0:19:3.39:3,0,957	0/1:20,0:17:99:160,0,593	0/1:12,0:10:22.83:23,0,210
chr10	20216623	.	GAGAGAGAGAGAGAGAGAGAGAGAC	G	1823.20	PASS	AB=1.000;AC=14;AF=0.250;AN=56;BaseQRankSum=6.195;DP=615;FS=3.990;HRun=0;HaplotypeScore=227.0568;InbreedingCoeff=0.4449;MQ=45.34;MQ0=28;MQRankSum=-1.585;QD=12.07;ReadPosRankSum=1.040;VQSLOD=2.4405;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:46:8.61:0,9,140	1/1:10,0:9:6.49:338,6,0	0/0:20,0:4:11.93:0,12,203	0/0:35,0:7:7.12:0,7,157	0/1:15,0:14:0:0,0,1	0/0:18,0:17:20.17:0,20,1008	0/0:33,0:31:42.14:0,42,2199	0/0:16,0:15:41.82:0,42,683	1/1:24,0:24:1.54:178,2,0	0/0:34,0:32:94.58:0,95,2956	0/0:11,0:11:12.50:0,12,389	0/0:36,0:33:56.21:0,56,2455	0/1:19,0:16:27.09:27,0,331	0/1:21,0:21:16.68:17,0,350	0/0:22,0:21:39.59:0,40,2578	0/0:25,0:24:14.07:0,14,402	0/0:24,0:23:25.80:0,26,630	0/0:13,0:12:23.44:0,23,772	0/0:7,0:7:20.21:0,20,398	0/0:16,0:14:17.91:0,18,459	0/0:24,0:21:5.46:0,5,36	0/0:27,0:26:27.08:0,27,1256	0/0:18,0:16:27.07:0,27,1217	0/0:37,0:35:13.49:0,13,616	1/1:5,14:19:3.01:94,3,0	0/1:14,0:14:99:539,0,220	1/1:19,0:17:1.77:514,2,0	1/1:10,0:8:6.33:264,6,0
chr10	20216625	.	GAGAGAGAGAGAGAGAGAGAGAC	G	2109.43	PASS	AB=1.000;AC=14;AF=0.250;AN=56;BaseQRankSum=6.478;DP=623;FS=5.066;HRun=0;HaplotypeScore=218.5814;InbreedingCoeff=0.4722;MQ=46.81;MQ0=29;MQRankSum=-1.867;QD=13.52;ReadPosRankSum=2.192;VQSLOD=2.3453;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:41:5.59:0,6,93	1/1:9,1:9:6.49:340,6,0	0/0:25,0:7:14.10:0,14,175	0/0:39,0:9:13.95:0,14,188	0/0:16,0:15:0.47:0,0,1	0/0:18,0:17:19.64:0,20,890	0/0:34,0:32:45.14:0,45,1883	0/0:20,0:19:50.38:0,50,622	1/1:21,0:21:1.71:162,2,0	0/0:35,0:33:93.98:0,94,2449	0/0:11,0:11:12.48:0,12,329	0/0:36,0:33:55.40:0,55,2066	0/1:19,0:16:11.30:11,0,247	0/1:21,0:21:47.46:47,0,265	0/0:22,0:21:42.58:0,43,2301	0/1:26,0:25:5.66:6,0,321	0/0:23,0:22:23.79:0,24,483	0/0:11,0:10:23.23:0,23,642	0/0:7,0:7:17.15:0,17,312	0/0:17,0:15:20.90:0,21,390	0/0:26,0:23:11.41:0,11,78	0/0:27,0:26:29.86:0,30,1088	0/0:18,0:16:27.07:0,27,1046	0/0:39,0:37:16.97:0,17,548	1/1:16,2:18:3.01:75,3,0	0/1:15,0:15:99:713,0,156	1/1:16,1:15:23.41:600,23,0	1/1:9,0:7:8.98:315,9,0
chr10	20216627	.	GAGAGAGAGAGAGAGAGAGAC	G	2190.18	PASS	AB=0.778;AC=14;AF=0.250;AN=56;BaseQRankSum=6.371;DP=625;FS=9.721;HRun=0;HaplotypeScore=209.6884;InbreedingCoeff=0.5150;MQ=47.49;MQ0=28;MQRankSum=-1.401;QD=16.10;ReadPosRankSum=3.125;VQSLOD=1.7296;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:10,32:40:4.19:0,4,70	1/1:3,6:8:6.49:329,6,0	0/0:27,0:8:17.09:0,17,170	0/0:42,0:10:16.94:0,17,191	0/1:3,13:15:0:0,0,1	0/0:19,0:18:21.62:0,22,792	0/0:35,0:33:48.11:0,48,1568	0/0:20,0:19:52.91:0,53,546	1/1:18,0:18:1.92:147,2,0	0/0:36,0:34:96:0,96,1974	0/0:12,0:12:15.47:0,15,304	0/0:33,0:30:54.12:0,54,1698	0/1:18,0:15:13.94:14,0,200	0/1:21,0:21:35.66:36,0,193	0/0:23,0:22:45.53:0,46,2025	0/0:26,0:25:9.70:0,10,258	0/0:23,0:22:31.56:0,32,389	0/0:13,0:12:29.01:0,29,584	0/0:9,0:9:23.89:0,24,305	0/0:17,0:15:24.34:0,24,346	0/0:28,0:25:14.39:0,14,101	0/0:26,0:25:29.86:0,30,920	0/0:19,0:17:30.06:0,30,899	0/0:39,0:38:20.15:0,20,495	1/1:17,0:17:3.01:56,3,0	0/1:3,11:14:97.60:801,0,98	1/1:15,0:14:25.92:630,26,0	1/1:2,6:6:6.02:335,6,0
chr10	20216808	.	T	TAC	984.72	PASS	AB=0.894;AC=26;AF=0.591;AN=44;BaseQRankSum=-2.392;DP=507;FS=11.551;HRun=0;HaplotypeScore=83.4332;InbreedingCoeff=0.2455;MQ=67.02;MQ0=11;MQRankSum=0.701;QD=3.35;ReadPosRankSum=0.309;VQSLOD=0.6005;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	0/0:12,0:12:1.25:0,1,3	1/1:21,0:20:14.10:122,14,0	1/1:34,0:32:5.98:47,6,0	./.	0/1:17,0:17:0:0,0,0	1/1:24,0:24:19.50:132,19,0	0/1:6,0:6:0:0,0,0	1/1:17,0:16:5.93:61,6,0	1/1:14,0:12:12:131,12,0	1/1:17,0:17:11.94:107,12,0	0/0:14,0:13:6.01:0,6,63	0/1:16,2:19:8.39:117,0,8	0/1:20,8:28:12.54:119,0,13	1/1:11,0:11:15.23:98,15,0	1/1:10,0:10:4.31:21,4,0	0/1:6,0:6:18.82:19,0,25	0/0:36,0:35:2.38:0,2,18	1/1:20,0:19:3.01:44,3,0	1/1:13,0:13:6:60,6,0	0/1:23,13:35:19.54:38,0,20	./.	0/0:15,0:16:2.84:0,3,14	0/0:17,0:18:2.71:0,3,12	0/0:2,0:2:1.82:0,2,5
chr10	20217931	.	G	GAA	975.75	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-6.876;DP=602;FS=10.841;HRun=7;HaplotypeScore=73.8271;InbreedingCoeff=0.9891;MQ=87.26;MQ0=1;MQRankSum=0.213;QD=37.53;ReadPosRankSum=-4.809;VQSLOD=1.4188;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:87.26:0,87,1014	0/0:6,0:6:18.05:0,18,210	0/0:35,0:29:55.75:0,56,656	0/0:24,0:22:35.92:0,36,399	0/0:17,0:17:42.12:0,42,489	0/0:26,0:26:72.16:0,72,823	0/0:24,0:24:60.16:0,60,699	1/1:3,23:26:66.23:1071,66,0	0/0:17,0:17:45.12:0,45,512	0/0:17,0:17:45.13:0,45,524	0/0:16,0:16:42.11:0,42,480	0/0:16,0:16:45.13:0,45,524	0/0:12,0:12:33.10:0,33,384	0/0:21,0:20:48.14:0,48,559	0/0:27,0:27:72.18:0,72,818	0/0:18,0:18:39.10:0,39,454	0/0:39,0:38:99:0,105,1223	0/0:20,0:20:53.28:0,53,628	0/0:20,0:20:48.13:0,48,559	0/0:13,0:13:36.09:0,36,409	0/0:27,0:27:75.22:0,75,873	0/0:25,0:25:72.21:0,72,839	0/0:10,0:10:24.07:0,24,279	0/0:35,0:35:99:0,99,1130	0/0:20,0:20:54.16:0,54,629	0/0:24,0:24:63.18:0,63,734	0/0:26,0:26:63.16:0,63,733	0/0:11,0:11:33.10:0,33,384
chr10	20218127	.	T	TGGG	18261.23	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-9.983;DP=492;FS=24.663;HRun=4;HaplotypeScore=72.9035;InbreedingCoeff=0.9553;MQ=95.03;MQ0=0;MQRankSum=-8.968;QD=47.19;ReadPosRankSum=2.431;VQSLOD=3.3496;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,16:21:42.14:907,42,0	1/1:0,4:5:6.02:134,6,0	0/0:26,0:26:66.68:0,67,977	0/0:31,0:30:75.18:0,75,1093	1/1:2,9:12:23.95:394,24,0	1/1:2,23:26:69.15:1445,69,0	1/1:4,18:22:51.17:1109,51,0	0/0:30,0:30:84.23:0,84,1240	1/1:4,17:21:54.18:1141,54,0	1/1:0,16:16:48.12:873,48,0	1/1:1,9:10:18.06:400,18,0	1/1:3,10:13:36.12:748,36,0	1/1:1,9:10:30.10:640,30,0	1/1:4,11:18:33.11:737,33,0	0/0:18,0:18:54.17:0,54,804	1/1:3,10:13:36.12:741,36,0	1/1:3,24:26:60.21:1340,60,0	1/1:3,15:19:42.14:938,42,0	1/1:4,19:23:63.22:1340,63,0	1/1:1,15:17:39:697,39,0	1/1:5,13:18:33.01:737,33,0	1/1:4,8:12:15.05:335,15,0	1/1:3,7:10:15.05:334,15,0	1/1:4,19:24:51.17:1109,51,0	1/1:2,10:12:21.07:468,21,0	1/1:5,17:22:51.13:883,51,0	1/1:1,8:9:17.34:371,17,0	1/1:0,7:7:21.07:441,21,0
chr10	20220247	.	C	CT	2196.46	PASS	AB=0.810;AC=15;AF=0.268;AN=56;BaseQRankSum=5.796;DP=328;FS=15.567;HRun=0;HaplotypeScore=98.3140;InbreedingCoeff=0.2572;MQ=48.81;MQ0=0;MQRankSum=-3.783;QD=16.90;ReadPosRankSum=3.470;VQSLOD=4.6744;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:4,11:15:6.36:304,0,6	0/1:1,2:3:3.29:87,0,3	0/0:5,0:4:11.74:0,12,107	0/0:7,0:5:12.65:0,13,92	1/1:6,6:12:18.87:248,19,0	0/1:21,0:21:12.78:13,0,238	0/0:16,0:16:12.05:0,12,246	0/0:15,0:13:9.46:0,9,275	1/1:3,4:7:9.50:132,10,0	0/0:18,0:18:16.03:0,16,471	0/1:10,0:10:0.61:1,0,107	0/0:10,0:10:24.01:0,24,267	0/0:18,0:18:14.14:0,14,229	0/0:11,0:11:1.10:0,1,110	0/0:19,0:19:15.06:0,15,162	0/0:14,0:14:7.68:0,8,281	0/0:11,0:11:8.83:0,9,111	0/0:10,0:10:27.08:0,27,318	0/0:8,0:7:18.02:0,18,210	0/0:21,0:21:12.59:0,13,128	0/0:8,0:8:5.97:0,6,83	0/1:9,0:9:0.11:0,0,85	0/1:8,0:8:4.86:5,0,73	0/0:7,0:7:3.01:0,3,41	1/1:1,9:10:21.41:377,21,0	0/1:7,18:25:19.47:867,0,19	0/1:1,7:8:3.70:310,0,4	0/1:2,0:2:8.85:10,0,9
chr10	20220263	.	TTATTG	T	289.32	PASS	AB=0.927;AC=12;AF=0.214;AN=56;BaseQRankSum=9.489;DP=383;FS=14.564;HRun=0;HaplotypeScore=134.5121;InbreedingCoeff=-0.0859;MQ=59.81;MQ0=0;MQRankSum=-6.372;QD=2.10;ReadPosRankSum=3.628;VQSLOD=1.4392;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,1:21:1.56:0,2,1258	0/1:2,1:3:27.02:27,0,172	0/0:14,0:13:39.12:0,39,1019	0/0:14,0:12:31.15:0,31,820	0/0:12,3:15:8.47:0,8,662	0/1:19,2:21:64.54:65,0,1354	0/0:19,0:19:32.94:0,33,1581	0/0:15,0:15:29.70:0,30,1142	0/1:8,0:8:10.30:10,0,654	0/1:17,2:19:93.63:94,0,1348	0/0:11,0:11:4.02:0,4,687	0/0:11,0:11:33.11:0,33,1054	0/1:17,1:18:62.61:63,0,1224	0/0:12,0:12:12.25:0,12,1036	0/0:20,0:20:52.35:0,52,1731	0/1:12,2:14:70.31:70,0,951	0/0:15,0:15:45.15:0,45,1363	0/0:13,0:13:39.13:0,39,1245	0/0:10,0:10:27.09:0,27,813	0/0:20,1:21:52.97:0,53,1682	0/0:9,0:9:18.06:0,18,517	0/1:10,0:10:2.01:2,0,653	0/1:8,0:8:27.97:28,0,370	0/0:12,0:12:24.02:0,24,705	0/0:13,0:13:5.40:0,5,940	0/1:23,1:24:1.68:2,0,1787	0/1:10,1:11:0.22:0,0,829	1/1:1,1:2:5.97:65,6,0
chr10	20220280	.	C	CCCT	168.21	PASS	AB=0.937;AC=10;AF=0.179;AN=56;BaseQRankSum=8.279;DP=413;FS=10.110;HRun=0;HaplotypeScore=131.5653;InbreedingCoeff=0.0046;MQ=72.48;MQ0=0;MQRankSum=-6.124;QD=1.49;ReadPosRankSum=0.465;VQSLOD=1.7575;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:48.96:0,49,931	0/1:3,1:4:31.82:32,0,147	0/0:17,0:16:45.11:0,45,765	0/0:23,0:23:53.33:0,53,746	0/1:11,3:14:89.94:90,0,483	0/0:18,0:18:16.44:0,16,762	0/0:22,0:22:54.18:0,54,976	0/0:13,0:13:36.12:0,36,671	0/0:10,0:10:13.44:0,13,425	0/1:19,0:19:78.10:78,0,665	0/0:11,0:11:20.76:0,21,384	0/0:13,0:13:36.10:0,36,592	0/1:18,0:18:30.58:31,0,729	0/0:12,0:12:9.25:0,9,569	0/0:23,0:23:59.06:0,59,1067	0/1:14,0:14:14.13:14,0,587	0/0:17,0:17:50.20:0,50,883	0/0:14,0:14:42.14:0,42,782	0/0:9,0:9:27.09:0,27,493	0/0:23,0:23:32.64:0,33,1019	0/0:12,0:12:27.09:0,27,496	0/0:15,0:15:32.76:0,33,679	0/1:9,0:9:0.81:1,0,367	0/0:13,0:13:33.11:0,33,612	0/0:13,0:13:6.82:0,7,584	0/1:21,1:22:3.57:4,0,1014	0/1:10,1:11:10.62:11,0,442	1/1:2,0:2:5.60:43,6,0
chr10	20220942	.	A	AGGAT	6048.69	PASS	AB=1.000;AC=42;AF=0.778;AN=54;BaseQRankSum=1.754;DP=902;FS=7.379;HRun=0;HaplotypeScore=168.0842;InbreedingCoeff=0.3679;MQ=70.03;MQ0=17;MQRankSum=0.214;QD=8.67;ReadPosRankSum=-0.820;VQSLOD=3.4428;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:13.62:0,14,214	1/1:8,0:8:9.03:161,9,0	./.	0/0:42,0:22:0:0,0,0	1/1:35,0:35:23.93:326,24,0	0/1:21,0:21:12.58:156,0,13	1/1:35,0:34:3.01:61,3,0	1/1:36,0:35:8.68:51,9,0	0/0:41,0:41:81.19:0,81,1147	1/1:51,0:50:45.06:730,45,0	1/1:27,0:27:19.15:297,19,0	1/1:31,0:31:6.02:102,6,0	1/1:25,3:27:42.09:740,42,0	1/1:32,0:32:12.04:222,12,0	0/0:37,0:38:63.60:0,64,902	1/1:38,0:35:1.13:388,1,0	1/1:31,0:31:9.03:180,9,0	1/1:17,3:20:19.99:673,20,0	1/1:29,0:28:15.94:140,16,0	0/1:21,0:21:5.82:6,0,43	0/1:59,0:58:40.35:51,0,40	1/1:26,0:26:15.99:254,16,0	1/1:37,0:37:9.03:185,9,0	1/1:37,0:37:11.99:242,12,0	1/1:21,0:21:3.90:59,4,0	1/1:40,0:40:63.10:918,63,0	0/1:27,0:27:47:47,0,107	1/1:8,0:7:3.01:58,3,0
chr10	20220979	.	GGATGGATA	G	10003.03	PASS	AB=0.816;AC=43;AF=0.768;AN=56;BaseQRankSum=0.326;DP=952;FS=8.509;HRun=0;HaplotypeScore=191.1525;InbreedingCoeff=0.3683;MQ=56.17;MQ0=50;MQRankSum=3.028;QD=12.38;ReadPosRankSum=-0.684;VQSLOD=3.2047;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:40:12.08:0,12,111	1/1:3,6:8:9.03:212,9,0	0/0:28,0:7:14.71:0,15,108	0/0:34,0:4:8.85:0,9,58	1/1:4,35:35:29.01:525,29,0	0/1:2,22:24:1.33:205,0,1	1/1:3,31:31:3.01:81,3,0	1/1:38,0:25:13.36:69,13,0	0/1:45,0:45:99:314,0,549	1/1:10,28:35:72.17:1143,72,0	1/1:0,29:28:19.16:458,19,0	1/1:2,35:36:6.02:163,6,0	1/1:33,7:39:78.78:1306,79,0	1/1:6,36:42:12.51:315,13,0	0/0:41,0:40:99:0,108,2148	1/1:8,42:47:1.40:601,1,0	1/1:5,22:27:12.92:262,13,0	1/1:28,0:27:13.32:1045,13,0	1/1:12,20:23:23.18:542,23,0	0/1:25,0:22:7.99:125,0,8	0/1:13,50:57:16.40:75,0,16	1/1:6,22:25:13.83:314,14,0	1/1:6,35:40:8.45:232,8,0	1/1:5,35:39:12.84:316,13,0	1/1:1,18:19:3.90:83,4,0	1/1:11,36:44:99:1487,105,0	0/1:26,0:26:46.77:47,0,71	1/1:0,7:7:3.01:81,3,0
chr10	20220983	.	GGATA	G	6867.14	PASS	AB=1.000;AC=47;AF=0.839;AN=56;BaseQRankSum=7.215;DP=935;FS=6.441;HRun=0;HaplotypeScore=166.0117;InbreedingCoeff=0.4245;MQ=56.32;MQ0=51;MQRankSum=3.684;QD=8.27;ReadPosRankSum=2.687;VQSLOD=3.7021;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:2,38:39:36.12:675,36,0	1/1:7,0:6:8.76:75,9,0	0/0:28,0:6:14.93:0,15,126	0/0:32,0:5:11.84:0,12,82	1/1:37,0:33:24.26:301,24,0	1/1:22,1:23:11.97:146,12,0	1/1:34,0:31:3.01:35,3,0	0/1:33,0:21:42.14:66,0,42	0/1:45,0:45:99:267,0,1016	1/1:35,0:32:62.93:627,63,0	1/1:29,0:28:18.83:209,19,0	1/1:36,0:35:6.02:71,6,0	1/1:40,1:40:98.87:817,99,0	1/1:40,0:40:14.06:136,14,0	0/0:45,0:44:99:0,107,1848	1/1:48,1:46:4.10:243,4,0	1/1:25,0:25:13.69:127,14,0	1/1:24,3:26:43.58:525,44,0	1/1:32,0:23:18.28:423,18,0	1/1:6,22:24:47.43:454,47,0	0/1:61,0:55:29.26:29,0,53	1/1:27,0:24:11.58:112,12,0	1/1:40,0:39:8.52:83,9,0	1/1:40,0:39:13.24:133,13,0	1/1:20,0:19:4.25:38,4,0	1/1:46,0:43:95.60:819,96,0	1/1:0,28:28:23.92:420,24,0	1/1:7,0:7:3.01:35,3,0
chr10	20221041	.	GTGGA	G	780.17	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.531;DP=898;FS=11.930;HRun=0;HaplotypeScore=165.1118;InbreedingCoeff=0.8920;MQ=60.14;MQ0=23;MQRankSum=-0.812;QD=21.67;ReadPosRankSum=-4.591;VQSLOD=1.6632;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:84.19:0,84,1946	0/0:8,0:8:18.06:0,18,438	0/0:38,0:15:39.08:0,39,672	0/0:31,0:20:21.29:0,21,522	0/0:24,0:24:57.20:0,57,1433	0/0:26,0:26:36.12:0,36,880	0/0:36,0:35:72.23:0,72,1661	1/1:10,26:31:44.86:875,45,0	0/0:40,0:39:99:0,117,2617	0/0:41,0:41:99:0,108,2359	0/0:21,0:21:21.50:0,22,461	0/0:34,0:34:48.02:0,48,1033	0/0:43,0:42:99:0,120,2834	0/0:44,0:43:57.18:0,57,1329	0/0:34,0:34:96.32:0,96,2300	0/0:31,0:31:33.03:0,33,669	0/0:31,0:30:66.14:0,66,1563	0/0:28,0:28:70.70:0,71,1539	0/0:43,0:40:99:0,111,2100	0/0:20,0:20:39.08:0,39,832	0/0:57,0:57:78.27:0,78,1907	0/0:23,0:23:36.07:0,36,754	0/0:31,0:31:41.96:0,42,1054	0/0:34,0:34:36.41:0,36,888	0/0:25,0:24:39.07:0,39,959	0/0:34,0:34:99:0,102,2307	0/0:32,0:32:55.22:0,55,1157	0/0:9,0:9:6.02:0,6,157
chr10	20221095	.	AGATG	A	3071.76	PASS	AB=0.965;AC=27;AF=0.540;AN=50;BaseQRankSum=-2.127;DP=769;FS=4.536;HRun=0;HaplotypeScore=179.1555;InbreedingCoeff=-0.0367;MQ=44.41;MQ0=88;MQRankSum=-0.410;QD=5.47;ReadPosRankSum=0.460;VQSLOD=2.6917;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:30,4:34:12.10:392,0,12	1/1:10,0:8:4.51:64,5,0	./.	./.	0/0:25,0:25:10.76:0,11,573	0/1:15,0:12:25.81:26,0,95	0/0:32,0:25:12.67:0,13,145	./.	0/1:22,25:45:99:551,0,102	0/1:28,0:23:60.92:61,0,101	0/0:11,0:10:5.95:0,6,72	1/1:29,0:27:13.22:149,13,0	0/1:40,0:38:70.69:71,0,367	0/1:33,0:29:43.89:93,0,44	1/1:20,16:34:27.09:412,27,0	0/1:36,0:32:79.75:80,0,266	0/1:32,0:30:44.01:44,0,152	0/1:28,0:27:3.76:4,0,229	0/0:31,0:22:11.94:0,12,152	0/1:21,0:16:28.04:28,0,151	0/1:41,0:33:24.19:24,0,134	0/1:23,0:21:0.49:0,0,198	0/1:23,0:20:13.98:14,0,96	0/0:25,0:23:17.14:0,17,204	1/1:15,15:25:33.02:447,33,0	1/1:16,8:17:24:317,24,0	1/1:13,9:22:17.92:276,18,0	1/1:2,7:9:12.04:185,12,0
chr10	20221271	.	AGATGGATGGATGGATGGATGGATG	A	1432.46	PASS	AB=1.000;AC=12;AF=0.240;AN=50;BaseQRankSum=2.023;DP=743;FS=20.951;HRun=0;HaplotypeScore=340.9820;InbreedingCoeff=0.5212;MQ=42.26;MQ0=112;MQRankSum=0.720;QD=8.48;ReadPosRankSum=-1.020;VQSLOD=0.9401;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:27:18.03:368,18,0	./.	./.	./.	1/1:9,17:23:2.96:19,3,0	0/0:16,0:12:2.72:0,3,94	0/0:33,0:24:6.89:0,7,116	0/0:26,0:12:17.90:0,18,135	0/1:28,0:24:62.45:62,0,85	0/0:19,0:29:13.52:0,14,488	0/0:6,0:5:6.01:0,6,72	0/0:30,0:27:41.64:0,42,331	0/0:34,0:29:17.78:0,18,138	0/0:24,0:20:17.96:0,18,153	0/0:55,0:50:93.22:0,93,3259	0/0:32,0:29:35.73:0,36,280	0/0:25,0:25:3.76:0,4,200	0/0:25,0:25:12.80:0,13,285	0/0:22,0:8:9.01:0,9,95	0/0:15,0:13:3:0,3,27	0/0:43,0:38:17.08:0,17,190	0/0:15,0:14:3:0,3,27	0/0:17,0:29:8.83:0,9,80	0/0:31,0:30:29.81:0,30,271	1/1:22,0:20:3.05:225,3,0	1/1:23,19:32:47.38:555,47,0	1/1:14,0:14:11:186,11,0	0/1:7,0:6:8.58:171,0,9
chr10	20221319	.	GGATA	G	447.12	PASS	AB=0.915;AC=5;AF=0.093;AN=54;BaseQRankSum=6.569;DP=700;FS=4.890;HRun=0;HaplotypeScore=164.1242;InbreedingCoeff=0.2835;MQ=48.22;MQ0=35;MQRankSum=-4.817;QD=5.45;ReadPosRankSum=-0.935;VQSLOD=2.1200;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:36:47.32:0,47,578	0/0:10,0:10:26.71:0,27,191	0/0:27,0:2:6:0,6,54	0/0:35,0:8:12.26:0,12,113	0/0:26,0:26:26.88:0,27,210	0/1:14,1:15:11.76:12,0,204	0/0:28,0:23:57.55:0,58,442	0/1:9,2:6:28.24:28,0,51	1/1:28,3:26:62.57:517,63,0	0/0:28,0:27:59.94:0,60,531	0/0:20,0:20:53.62:0,54,424	0/0:21,1:20:0.64:0,1,273	0/0:33,0:29:67.37:0,67,586	0/0:24,0:23:67.25:0,67,463	0/0:45,0:43:89.66:0,90,1478	0/0:25,0:25:56.32:0,56,418	0/1:24,1:24:7.34:7,0,343	0/0:21,0:21:36.90:0,37,321	0/0:19,0:9:26.85:0,27,211	0/0:19,0:18:47.55:0,48,375	0/0:50,1:48:76.59:0,77,609	0/0:18,0:18:41.75:0,42,327	0/0:22,0:20:14.85:0,15,114	0/0:39,0:37:18.85:0,19,417	0/0:18,0:16:17.93:0,18,264	0/0:35,0:30:36.40:0,36,449	0/0:15,0:15:16.14:0,16,240	./.
chr10	20221419	.	TGATGGATGGATG	T	8656.45	PASS	AB=0.944;AC=29;AF=0.558;AN=52;BaseQRankSum=-3.140;DP=816;FS=8.706;HRun=0;HaplotypeScore=266.5203;InbreedingCoeff=0.7365;MQ=43.13;MQ0=107;MQRankSum=-2.888;QD=18.30;ReadPosRankSum=2.728;VQSLOD=1.6950;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:32:49.85:0,50,708	0/0:3,0:6:15.05:0,15,307	./.	./.	0/0:14,0:16:5.81:0,6,99	1/1:13,4:15:27.06:501,27,0	0/1:20,0:18:3.57:158,0,4	0/0:29,0:21:14.11:0,14,175	0/0:24,0:37:66.02:0,66,1225	1/1:36,5:35:45.15:1005,45,0	1/1:15,0:11:8.65:90,9,0	1/1:31,15:45:75.08:1463,75,0	1/1:35,5:38:50.66:1023,51,0	1/1:24,8:32:39.09:995,39,0	0/0:38,0:37:63.20:0,63,2169	1/1:29,4:33:42.02:812,42,0	1/1:24,3:27:24.94:608,25,0	0/1:14,2:16:56.10:344,0,56	1/1:25,1:13:15.05:301,15,0	1/1:17,4:19:17.95:197,18,0	0/1:53,1:45:38.97:224,0,39	1/1:18,7:18:20.83:193,21,0	1/1:19,1:18:8.73:92,9,0	1/1:36,3:38:30.22:651,30,0	0/0:11,0:15:25.89:0,26,406	0/0:37,0:36:36.10:0,36,632	0/0:14,0:16:24.07:0,24,406	0/0:9,0:10:9.94:0,10,124
chr10	20221485	.	GTAGTC	G	10349.90	PASS	AB=0.983;AC=42;AF=0.750;AN=56;BaseQRankSum=1.268;DP=669;FS=78.854;HRun=0;HaplotypeScore=297.1792;InbreedingCoeff=0.1506;MQ=40.38;MQ0=3;MQRankSum=-6.024;QD=16.75;ReadPosRankSum=-4.250;VQSLOD=1.5774;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:48,1:46:99:389,0,181	0/1:12,1:13:21.92:305,0,22	0/0:8,0:2:2.99:0,3,23	0/0:10,0:1:3.01:0,3,45	0/0:31,0:29:29.58:0,30,109	1/1:11,2:11:20.79:272,21,0	1/1:17,0:15:11.86:92,12,0	1/1:8,13:15:32.58:577,33,0	0/1:38,0:36:99:412,0,121	1/1:27,2:21:54.45:794,54,0	1/1:10,1:8:9.42:88,9,0	1/1:32,9:40:67.19:861,67,0	1/1:25,6:30:61.98:796,62,0	1/1:31,3:34:55.90:624,56,0	0/1:37,0:35:89.95:462,0,90	1/1:23,3:26:58.37:555,58,0	1/1:28,1:29:68.09:591,68,0	1/1:14,2:16:40.08:495,40,0	1/1:7,5:12:31.52:554,32,0	1/1:14,2:13:19.01:196,19,0	1/1:33,4:27:22.61:338,23,0	1/1:21,0:16:16.82:175,17,0	1/1:11,1:10:8.51:93,9,0	1/1:36,3:39:68.08:660,68,0	0/1:22,0:22:59.75:249,0,60	0/1:29,0:25:30.56:509,0,31	0/1:19,1:20:52.80:190,0,53	0/1:5,0:5:1.68:73,0,2
chr10	20221486	.	TA	T	17457.38	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-0.545;DP=620;FS=0.000;HRun=1;HaplotypeScore=221.4712;InbreedingCoeff=0.7033;MQ=41.15;MQ0=3;MQRankSum=-0.020;QD=29.00;ReadPosRankSum=2.190;VQSLOD=4.3650;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,46:45:99:1442,106,0	1/1:1,12:13:33.11:459,33,0	0/0:7,2:2:3.01:0,3,31	0/0:9,0:1:3.01:0,3,42	1/1:0,29:27:35.11:502,35,0	1/1:2,9:10:21.07:291,21,0	1/1:0,14:12:17.79:236,18,0	1/1:13,4:12:33.06:376,33,0	1/1:1,36:35:90.30:1249,90,0	1/1:2,25:20:60.20:833,60,0	1/1:1,10:8:11.40:166,11,0	1/1:9,25:34:87.27:1139,87,0	1/1:6,25:30:81.26:1079,81,0	1/1:3,28:31:81.26:1096,81,0	1/1:0,34:33:78.26:1084,78,0	1/1:3,23:26:75.25:1023,75,0	1/1:1,26:27:78.25:1057,78,0	1/1:2,14:16:42.12:559,42,0	1/1:5,6:11:33.07:386,33,0	1/1:2,13:12:20.90:278,21,0	1/1:5,30:25:23.11:329,23,0	1/1:0,17:13:17.87:249,18,0	1/1:1,8:7:8.63:124,9,0	1/1:4,33:37:78.23:1061,78,0	1/1:0,21:21:51.17:704,51,0	1/1:1,26:24:72.21:963,72,0	1/1:1,19:20:48.16:669,48,0	1/1:2,2:4:8.99:103,9,0
chr10	20221966	.	C	CACACACACA	4154.93	PASS	AB=0.947;AC=23;AF=0.411;AN=56;BaseQRankSum=2.507;DP=550;FS=10.443;HRun=0;HaplotypeScore=185.9177;InbreedingCoeff=-0.5751;MQ=65.10;MQ0=5;MQRankSum=-0.608;QD=9.75;ReadPosRankSum=-3.557;VQSLOD=1.1378;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:28:99:108,0,116	0/0:4,0:4:8.78:0,9,80	0/0:28,0:20:44.97:0,45,972	0/0:32,0:23:52.33:0,52,898	1/1:16,0:16:9.22:232,9,0	0/1:22,1:21:87.41:262,0,87	0/1:29,2:31:99:140,0,131	0/0:27,0:27:0.65:0,1,849	0/1:16,0:19:99:362,0,102	0/1:14,0:15:81.96:313,0,82	0/0:9,0:9:7.59:0,8,53	0/1:21,0:21:94.85:233,0,95	0/1:15,2:18:99:428,0,108	0/1:25,2:26:82.85:293,0,83	0/0:24,0:24:60.17:0,60,1435	0/1:21,0:25:99:579,0,108	0/1:7,2:14:21.13:306,0,21	0/1:10,0:10:63.03:75,0,63	0/1:23,0:21:90.31:124,0,90	0/1:8,0:8:12.26:19,0,12	0/1:33,0:33:36.68:37,0,153	0/1:16,0:16:35.51:67,0,36	0/1:16,0:16:47.24:47,0,103	0/1:22,2:26:30.16:309,0,30	0/1:20,0:17:34.07:34,0,74	0/1:18,0:17:99:102,0,116	0/1:13,0:13:48.67:49,0,147	0/1:4,0:4:6.35:37,0,6
chr10	20222976	.	TG	T	5933.84	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=12.827;DP=581;FS=2.018;HRun=1;HaplotypeScore=56.9683;InbreedingCoeff=0.9979;MQ=88.98;MQ0=0;MQRankSum=-3.123;QD=37.56;ReadPosRankSum=3.953;VQSLOD=5.3308;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,34:34:93.31:1300,93,0	1/1:0,11:11:27.09:378,27,0	0/0:29,0:29:87.14:0,87,1317	0/0:16,0:15:42.03:0,42,597	1/1:0,22:22:57.19:797,57,0	0/0:21,0:21:63.12:0,63,886	0/0:21,0:21:63.21:0,63,1007	0/0:31,0:31:90.29:0,90,1392	1/1:0,13:13:36.09:482,36,0	0/0:22,0:22:66.22:0,66,1036	0/0:26,0:26:78.25:0,78,1218	0/0:21,0:21:63.21:0,63,1004	0/0:19,0:19:57.18:0,57,887	0/0:24,0:24:72.21:0,72,1101	0/0:15,0:15:45.15:0,45,717	0/0:13,0:13:39.13:0,39,621	0/0:30,0:30:90.31:0,90,1438	0/0:22,0:22:63.17:0,63,978	0/0:27,0:27:81.27:0,81,1271	0/0:21,0:21:63.21:0,63,1003	0/0:17,0:17:51.17:0,51,815	0/0:8,0:8:24.08:0,24,383	0/0:14,0:14:39.07:0,39,571	0/0:26,0:26:78.27:0,78,1246	1/1:0,27:27:75.25:1049,75,0	1/1:1,24:25:27.25:921,27,0	1/1:0,18:18:54.18:755,54,0	1/1:0,8:8:18.06:252,18,0
chr10	20225243	.	T	TG	1233.51	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-8.714;DP=726;FS=25.701;HRun=1;HaplotypeScore=69.2404;InbreedingCoeff=0.9959;MQ=83.21;MQ0=0;MQRankSum=-0.511;QD=41.12;ReadPosRankSum=-4.334;VQSLOD=0.7242;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,138,1763	0/0:17,0:17:48.16:0,48,623	0/0:21,0:21:60.67:0,61,775	0/0:27,0:27:69.22:0,69,886	0/0:24,0:24:69.22:0,69,890	0/0:18,0:18:51.17:0,51,662	0/0:34,0:34:99:0,99,1286	1/1:0,30:30:90.29:1328,90,0	0/0:20,0:20:57.18:0,57,737	0/0:17,0:17:39.13:0,39,506	0/0:14,0:14:42.12:0,42,531	0/0:22,0:22:60.18:0,60,764	0/0:23,0:23:69.22:0,69,895	0/0:23,0:23:66.20:0,66,843	0/0:17,0:17:48.16:0,48,623	0/0:27,0:27:81.26:0,81,1052	0/0:34,0:34:99:0,102,1324	0/0:22,0:22:60.17:0,60,763	0/0:16,0:16:45.15:0,45,584	0/0:29,0:29:87.28:0,87,1127	0/0:38,0:38:99:0,111,1430	0/0:38,0:38:99:0,111,1439	0/0:20,0:20:57.17:0,57,721	0/0:33,0:33:99:0,99,1286	0/0:34,0:34:99:0,102,1308	0/0:38,0:38:99:0,102,1325	0/0:34,0:34:99:0,102,1294	0/0:8,0:8:21.07:0,21,273
chr10	20226134	.	AACACAC	A	11097.16	PASS	AB=0.898;AC=48;AF=0.857;AN=56;BaseQRankSum=2.825;DP=682;FS=0.000;HRun=0;HaplotypeScore=170.8640;InbreedingCoeff=0.5470;MQ=60.01;MQ0=17;MQRankSum=-0.923;QD=18.53;ReadPosRankSum=3.396;VQSLOD=4.2336;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:34,3:36:45.14:871,45,0	1/1:8,0:8:21.07:420,21,0	0/0:30,0:20:34.40:0,34,770	0/0:24,0:14:15.05:0,15,345	1/1:13,4:20:24.03:429,24,0	1/1:20,0:19:3.01:53,3,0	0/1:29,1:27:63.24:63,0,178	1/1:10,13:23:39.11:749,39,0	0/1:23,5:29:2.86:432,0,3	1/1:27,0:26:54:894,54,0	1/1:17,0:17:2.94:18,3,0	1/1:36,3:38:18.06:302,18,0	1/1:30,1:31:27.08:405,27,0	1/1:20,1:21:29.31:508,29,0	0/0:29,0:29:63.22:0,63,1743	1/1:38,2:40:21.03:367,21,0	1/1:18,1:18:1.35:55,1,0	1/1:17,1:16:30.10:570,30,0	1/1:15,1:15:27.02:443,27,0	1/1:12,1:14:12.03:217,12,0	1/1:30,0:26:3.01:52,3,0	1/1:18,0:18:15.05:305,15,0	1/1:21,2:23:30.09:601,30,0	1/1:36,3:39:27.56:541,28,0	1/1:14,1:15:21.04:370,21,0	1/1:24,6:30:69.22:1303,69,0	1/1:21,4:24:54.18:1066,54,0	1/1:1,0:4:3.01:64,3,0
chr10	20226148	.	CACACACAG	C	12435	PASS	AB=0.642;AC=46;AF=0.821;AN=56;BaseQRankSum=2.846;DP=737;FS=3.683;HRun=0;HaplotypeScore=184.5306;InbreedingCoeff=0.3751;MQ=48.69;MQ0=33;MQRankSum=-0.145;QD=18.64;ReadPosRankSum=2.999;VQSLOD=4.2653;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:48,2:46:43.85:901,44,0	1/1:10,0:9:20.94:441,21,0	0/0:25,0:16:34.87:0,35,770	0/0:17,0:7:15.05:0,15,345	1/1:24,1:24:24.50:430,24,0	1/1:8,16:22:3.01:53,3,0	0/1:8,22:27:99:128,0,177	1/1:20,0:20:7.57:711,8,0	0/1:18,5:28:32.38:517,0,32	1/1:10,21:29:54.26:961,54,0	1/1:2,17:18:2.94:18,3,0	1/1:9,29:36:11.78:407,12,0	1/1:5,26:31:27.09:636,27,0	1/1:14,7:21:33.03:620,33,0	0/0:28,0:28:75.24:0,75,2146	0/1:12,28:39:58.03:464,0,58	0/1:12,12:21:22.43:26,0,22	1/1:18,2:14:38.79:758,39,0	1/1:17,1:16:29.98:464,30,0	1/1:14,3:16:11.92:217,12,0	1/1:15,25:33:3.01:52,3,0	1/1:15,7:20:15.05:338,15,0	1/1:23,2:25:30.09:601,30,0	1/1:34,4:34:27.56:541,28,0	1/1:14,2:16:8.01:354,8,0	1/1:41,4:44:90.37:1588,90,0	1/1:22,3:25:41.79:1146,42,0	1/1:7,0:4:3.01:64,3,0
chr10	20226154	.	CAGAGAG	C	2109.46	PASS	AB=0.985;AC=30;AF=0.652;AN=46;BaseQRankSum=6.745;DP=709;FS=8.492;HRun=0;HaplotypeScore=196.7715;InbreedingCoeff=0.1916;MQ=47.71;MQ0=38;MQRankSum=-5.436;QD=4.30;ReadPosRankSum=3.139;VQSLOD=1.3171;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:47,0:41:1.16:44,1,0	0/1:10,0:9:16.59:58,0,17	./.	./.	1/1:23,1:22:0.43:1,0,0	1/1:24,0:22:2.35:9,2,0	0/1:31,0:28:58.87:59,0,107	0/0:22,0:22:20.91:0,21,192	0/1:23,0:23:56.74:103,0,57	0/1:27,2:27:0.73:145,0,1	0/0:19,0:18:0:0,0,0	1/1:37,1:36:16.67:135,17,0	1/1:30,1:31:26.82:255,27,0	1/1:16,2:18:8.34:122,8,0	0/0:30,0:30:50.13:0,50,932	0/1:41,1:38:81.58:182,0,82	0/0:22,1:20:5.34:0,5,51	1/1:19,0:13:26.29:265,26,0	1/1:16,0:14:2.54:43,3,0	0/0:18,1:18:0:0,0,0	./.	1/1:20,1:19:5.89:39,6,0	./.	1/1:37,1:33:5.90:47,6,0	0/1:13,0:13:20.74:21,0,30	1/1:41,0:40:57.24:516,57,0	1/1:26,0:24:19.04:206,19,0	./.
chr10	20226212	.	GAC	G	320.12	PASS	AB=0.950;AC=10;AF=0.200;AN=50;BaseQRankSum=5.480;DP=634;FS=0.866;HRun=0;HaplotypeScore=139.6822;InbreedingCoeff=0.0903;MQ=39.96;MQ0=35;MQRankSum=-5.905;QD=1.96;ReadPosRankSum=0.669;VQSLOD=2.6971;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,9:29:2.87:0,3,55	0/1:8,0:7:11.77:12,0,51	./.	0/0:9,0:3:3.01:0,3,43	./.	0/0:25,0:22:15.05:0,15,203	0/0:38,0:29:3:0,3,28	0/0:28,0:26:62.63:0,63,784	0/1:25,0:24:5.06:5,0,475	0/0:25,0:19:47.71:0,48,594	0/0:18,0:15:15.05:0,15,208	0/0:23,0:20:24.94:0,25,471	0/1:20,0:19:35.50:36,0,300	1/1:22,0:21:1.79:5,2,0	0/0:30,0:30:78.25:0,78,1358	0/0:33,0:28:13.45:0,13,606	0/0:33,0:28:51.21:0,51,766	0/0:21,0:15:11.15:0,11,65	0/0:14,0:14:35.52:0,36,344	0/0:21,1:22:0:0,0,0	0/0:37,0:31:33.58:0,34,472	./.	0/0:20,0:18:9.03:0,9,119	0/1:41,0:37:0.01:0,0,0	0/0:7,3:10:3.01:0,3,58	0/1:17,6:20:99:316,0,120	0/1:17,2:12:31.57:55,0,32	1/1:5,0:3:0.47:1,0,0
chr10	20226216	.	GAC	G	258.48	PASS	AB=0.957;AC=11;AF=0.212;AN=52;BaseQRankSum=5.962;DP=656;FS=2.814;HRun=0;HaplotypeScore=138.5689;InbreedingCoeff=0.2873;MQ=40.70;MQ0=34;MQRankSum=-6.551;QD=1.45;ReadPosRankSum=-0.508;VQSLOD=2.6745;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,2:29:2.87:0,3,55	0/0:9,0:8:4.43:0,4,69	0/0:7,0:3:6.02:0,6,78	0/0:18,0:7:9.03:0,9,120	./.	0/0:21,3:21:15.05:0,15,203	0/0:39,0:30:3:0,3,28	0/0:28,0:27:68.42:0,68,789	0/1:22,0:21:2.51:3,0,478	0/0:25,0:19:21.05:0,21,642	0/0:18,0:15:15.05:0,15,207	0/1:24,1:22:0.53:1,0,528	0/1:17,2:18:69.29:69,0,318	1/1:23,0:22:6.02:72,6,0	0/0:29,0:29:81.28:0,81,1420	0/0:30,1:26:11.65:0,12,641	0/0:30,1:27:19.71:0,20,777	1/1:22,0:17:1.52:40,2,0	0/0:19,0:18:28.99:0,29,274	0/0:22,1:23:0:0,0,0	0/0:42,0:36:40.07:0,40,567	./.	0/0:16,2:16:9.03:0,9,123	0/1:40,0:36:0:0,0,0	0/0:12,0:11:5.88:0,6,73	0/1:20,2:19:99:167,0,135	0/0:19,0:12:10.37:0,10,109	1/1:4,1:3:3:26,3,0
chr10	20226218	.	C	CAG	194.32	PASS	AB=0.957;AC=11;AF=0.220;AN=50;BaseQRankSum=4.937;DP=655;FS=1.862;HRun=0;HaplotypeScore=140.9808;InbreedingCoeff=0.2665;MQ=40.95;MQ0=34;MQRankSum=-6.006;QD=1.30;ReadPosRankSum=-1.350;VQSLOD=2.1251;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:29:3.01:0,3,36	0/0:9,0:8:4.56:0,5,50	0/0:7,0:3:6.02:0,6,77	0/0:21,0:7:9.03:0,9,120	./.	0/0:22,2:21:15.05:0,15,215	0/0:37,0:28:2.91:0,3,18	0/0:28,0:26:58.86:0,59,583	0/0:22,0:21:17.25:0,17,483	0/0:24,0:18:1.89:0,2,561	0/0:14,2:13:18.05:0,18,237	0/0:24,1:22:16.99:0,17,573	0/1:16,3:18:21.28:21,0,310	1/1:19,4:22:5.97:107,6,0	0/0:29,0:29:81.26:0,81,1142	0/0:29,3:28:17.62:0,18,727	0/0:30,2:28:38.14:0,38,798	1/1:22,1:18:4.97:106,5,0	0/1:18,0:16:23.93:24,0,137	0/1:21,2:23:0:0,0,0	0/0:42,0:36:40.54:0,41,559	./.	0/1:16,0:14:0.47:0,0,77	./.	0/0:13,0:12:5.87:0,6,52	0/1:23,0:19:36.23:36,0,194	0/0:20,0:12:18.42:0,18,117	1/1:5,0:3:3:26,3,0
chr10	20226220	.	GAC	G	76.19	PASS	AB=0.925;AC=9;AF=0.173;AN=52;BaseQRankSum=5.810;DP=662;FS=0.849;HRun=0;HaplotypeScore=138.0183;InbreedingCoeff=0.4099;MQ=41.37;MQ0=38;MQRankSum=-6.239;QD=0.55;ReadPosRankSum=-1.867;VQSLOD=2.4247;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,3:31:2.87:0,3,37	0/0:8,0:8:8.57:0,9,80	0/0:9,0:3:6.02:0,6,85	0/0:21,2:7:15.05:0,15,200	./.	0/0:24,0:21:18.05:0,18,228	0/0:36,0:27:2.92:0,3,18	0/0:29,0:27:61.28:0,61,453	0/1:17,5:21:20.09:20,0,354	0/0:25,0:19:49.27:0,49,626	0/0:15,0:12:18.06:0,18,252	0/0:26,0:23:40.02:0,40,672	0/0:19,1:19:7.68:0,8,339	1/1:23,0:22:5.90:38,6,0	0/0:31,0:31:87.25:0,87,1450	0/0:34,0:30:55.66:0,56,833	0/0:32,0:28:55.05:0,55,806	1/1:23,0:18:4.65:27,5,0	0/0:18,0:15:25.30:0,25,239	0/0:22,0:22:0:0,0,0	0/0:43,0:36:43.86:0,44,613	./.	0/0:15,0:13:9.03:0,9,122	0/1:41,0:37:0:0,0,0	0/0:13,0:12:6.01:0,6,86	0/1:23,1:20:88.05:88,0,125	0/0:20,0:12:10.71:0,11,87	1/1:5,0:3:3:26,3,0
chr10	20226224	.	GACAGAGAC	G	7556.88	PASS	AB=0.929;AC=33;AF=0.635;AN=52;BaseQRankSum=-1.625;DP=666;FS=0.000;HRun=0;HaplotypeScore=136.2947;InbreedingCoeff=0.3580;MQ=42.35;MQ0=39;MQRankSum=3.585;QD=15.30;ReadPosRankSum=1.791;VQSLOD=4.0084;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:29:2.32:0,2,37	0/1:7,0:7:13.16:13,0,55	0/0:18,0:4:9.02:0,9,117	0/0:27,0:7:15.05:0,15,226	./.	1/1:21,0:19:18.06:364,18,0	1/1:35,0:27:2.45:14,2,0	0/1:24,0:22:5.95:6,0,33	0/1:23,0:22:85.73:86,0,87	1/1:21,2:17:51.13:967,51,0	1/1:14,0:12:21.07:383,21,0	1/1:26,1:24:63:1096,63,0	1/1:20,1:20:28.20:537,28,0	1/1:21,2:22:6.02:73,6,0	0/0:29,0:29:84.29:0,84,2156	0/1:31,1:28:30.37:1154,0,30	1/1:32,1:29:8.49:987,8,0	1/1:20,0:16:5.98:73,6,0	1/1:6,14:16:39.05:617,39,0	0/1:4,17:21:0.11:0,0,0	1/1:45,0:39:46.30:772,46,0	./.	1/1:16,0:14:12.04:219,12,0	0/1:42,1:39:0:0,0,0	0/0:13,0:12:2.99:0,3,24	1/1:21,0:17:9.87:155,10,0	0/1:24,0:16:19.17:41,0,19	0/0:5,0:3:0:0,0,0
chr10	20226226	.	CAG	C	1323.61	PASS	AB=0.847;AC=24;AF=0.462;AN=52;BaseQRankSum=2.931;DP=675;FS=2.862;HRun=0;HaplotypeScore=127.2722;InbreedingCoeff=-0.0362;MQ=43.69;MQ0=39;MQRankSum=5.548;QD=3.20;ReadPosRankSum=2.701;VQSLOD=2.2230;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,13:28:2.86:0,3,49	0/1:1,6:7:45.74:76,0,46	0/0:22,0:4:8.97:0,9,110	0/0:31,0:8:15.05:0,15,228	./.	1/1:23,0:20:5.92:16,6,0	0/0:36,0:28:1.25:0,1,3	1/1:3,17:19:42.14:596,42,0	0/1:8,15:22:99:322,0,107	0/1:23,0:17:27.21:33,0,27	1/1:14,0:12:5.93:15,6,0	0/1:27,0:24:6.60:28,0,7	0/1:21,0:20:5.12:5,0,22	0/0:24,0:23:4.52:0,5,25	0/0:30,0:30:87.28:0,87,1437	0/1:32,0:28:30:30,0,58	0/1:34,0:30:20.12:20,0,61	0/1:20,0:16:2.24:2,0,33	0/0:20,0:16:1.11:0,1,49	0/0:21,0:21:0:0,0,0	1/1:46,0:40:10.34:23,10,0	./.	1/1:16,0:14:4.75:13,5,0	0/1:43,0:39:0:0,0,0	0/1:6,7:12:9.70:37,0,10	0/1:13,6:15:62.07:62,0,83	0/1:9,16:17:30.49:152,0,30	1/1:7,0:5:0.88:39,1,0
chr10	20226228	.	GAGAC	G	6431.91	PASS	AB=0.820;AC=29;AF=0.558;AN=52;BaseQRankSum=1.194;DP=674;FS=7.233;HRun=0;HaplotypeScore=120.4042;InbreedingCoeff=0.5422;MQ=44.05;MQ0=37;MQRankSum=3.130;QD=13.43;ReadPosRankSum=1.348;VQSLOD=4.1551;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:27:5.07:0,5,60	0/0:7,0:7:2.55:0,3,58	0/0:22,0:4:9.02:0,9,118	0/0:33,0:10:21.07:0,21,317	./.	1/1:20,2:19:18.06:290,18,0	0/1:12,24:28:0.11:0,0,0	0/0:21,0:20:5.82:0,6,79	0/1:23,0:22:9.91:10,0,86	1/1:20,2:17:48.16:751,48,0	1/1:14,0:12:21.07:334,21,0	1/1:27,2:26:66.22:1053,66,0	1/1:19,1:19:33.11:509,33,0	0/1:7,17:23:0:0,0,0	0/0:30,0:30:78.27:0,78,1569	1/1:29,2:28:56.87:922,57,0	1/1:32,2:30:55.07:864,55,0	0/1:6,13:15:0:0,0,0	1/1:20,0:16:39.05:531,39,0	0/1:21,0:21:0:0,0,0	1/1:45,1:40:50.33:795,50,0	./.	1/1:16,1:15:18.06:288,18,0	0/1:15,29:40:0:0,0,0	0/1:12,0:12:0:0,0,0	0/1:18,0:15:64.73:72,0,65	0/1:25,0:17:4.18:14,0,4	0/0:6,0:5:5.93:0,6,40
chr10	20226340	.	C	CAG	642.74	PASS	AB=0.994;AC=4;AF=0.071;AN=56;BaseQRankSum=-3.694;DP=813;FS=4.208;HRun=0;HaplotypeScore=121.7940;InbreedingCoeff=0.4560;MQ=67.66;MQ0=11;MQRankSum=1.060;QD=3.72;ReadPosRankSum=-5.760;VQSLOD=0.4165;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,102,1160	0/0:14,0:14:42.13:0,42,525	0/1:59,0:26:15.20:15,0,328	0/1:85,0:42:11.26:11,0,357	0/0:26,0:26:72.21:0,72,885	0/0:17,0:16:30.09:0,30,374	0/0:18,0:18:42.13:0,42,525	1/1:11,15:28:16.69:725,17,0	0/0:32,0:32:66.11:0,66,764	0/0:27,0:27:57.18:0,57,703	0/0:20,0:20:54.15:0,54,650	0/0:33,0:33:69.14:0,69,807	0/0:32,0:32:63.19:0,63,774	0/0:22,0:22:10.98:0,11,330	0/0:36,0:36:75.20:0,75,910	0/0:34,0:33:72.19:0,72,878	0/0:35,0:34:81.23:0,81,1013	0/0:18,0:19:47.98:0,48,577	0/0:23,0:19:33.10:0,33,412	0/0:17,0:17:38.60:0,39,449	0/0:28,0:28:71.40:0,71,823	0/0:17,0:17:39.12:0,39,488	0/0:17,0:17:39.11:0,39,475	0/0:38,0:39:77.84:0,78,925	0/0:13,0:13:39.12:0,39,487	0/0:30,0:30:84.27:0,84,1050	0/0:28,0:28:69.22:0,69,863	0/0:11,0:11:24.08:0,24,300
chr10	20226493	.	G	GGA	263.47	PASS	AB=0.981;AC=21;AF=0.404;AN=52;BaseQRankSum=-2.556;DP=590;FS=14.969;HRun=0;HaplotypeScore=109.1007;InbreedingCoeff=0.0582;MQ=56.52;MQ0=20;MQRankSum=0.870;QD=0.76;ReadPosRankSum=-2.413;VQSLOD=0.8770;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:26:4.36:0,4,24	0/0:9,0:8:5.40:0,5,29	0/1:40,0:8:0:0,0,0	./.	0/0:11,0:10:5.44:0,5,24	1/1:12,0:11:2.04:6,2,0	0/1:18,0:18:12.86:25,0,13	./.	0/0:25,0:25:14.43:0,14,86	0/0:20,0:18:14.79:0,15,76	1/1:22,0:21:5.81:49,6,0	0/1:22,0:21:16.14:16,0,21	0/1:22,0:22:14.26:14,0,30	0/1:15,0:15:0:0,0,0	0/1:16,7:24:17.69:157,0,18	0/1:26,0:26:8.58:9,0,24	0/1:20,0:20:31.94:32,0,40	0/0:16,0:16:5.75:0,6,30	0/1:19,0:18:1.95:2,0,10	0/0:15,0:15:2.58:0,3,12	1/1:41,0:40:6.51:62,7,0	0/1:13,0:13:0:0,0,0	0/1:14,0:14:0:0,0,0	0/1:19,0:18:3.02:3,0,6	0/1:10,0:10:7.16:15,0,7	0/0:18,0:16:5.96:0,6,27	0/0:17,0:17:14.42:0,14,94	1/1:11,0:9:0.47:1,0,0
chr10	20226529	.	AGAGAGC	A	3596.99	PASS	AB=0.997;AC=31;AF=0.554;AN=56;BaseQRankSum=-0.545;DP=581;FS=16.111;HRun=0;HaplotypeScore=132.9460;InbreedingCoeff=-0.1349;MQ=68.67;MQ0=15;MQRankSum=-2.529;QD=8.38;ReadPosRankSum=2.872;VQSLOD=1.7775;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:27:41.43:249,0,41	0/1:10,0:10:12.06:75,0,12	0/0:40,0:14:27.21:0,27,242	0/0:56,0:24:34.96:0,35,261	0/1:15,0:14:36.11:60,0,36	0/1:10,0:10:4.51:83,0,5	1/1:22,0:22:8.68:381,9,0	1/1:24,0:24:58.19:484,58,0	1/1:6,18:24:14.84:266,15,0	1/1:20,1:20:48.20:367,48,0	0/1:15,0:14:37.17:37,0,72	1/1:24,0:23:5.20:21,5,0	0/1:19,0:19:99:156,0,110	0/0:14,0:14:3.01:0,3,43	0/0:20,0:20:38.95:0,39,602	1/1:12,1:13:11.04:66,11,0	0/1:23,0:23:99:190,0,304	0/1:13,0:13:10.18:10,0,54	0/1:22,0:22:86.82:290,0,87	1/1:12,0:12:2.17:6,2,0	0/1:32,0:31:25.45:252,0,25	1/1:15,0:15:2.94:18,3,0	0/1:15,0:15:3.99:114,0,4	0/1:23,1:24:99:111,0,120	0/1:21,0:21:99:198,0,110	0/1:16,0:13:57.77:58,0,151	0/0:22,0:22:21.06:0,21,409	0/1:12,0:9:48.19:105,0,48
chr10	20226531	.	AGAGC	A	5112.24	PASS	AB=1.000;AC=42;AF=0.778;AN=54;BaseQRankSum=-2.297;DP=573;FS=2.007;HRun=0;HaplotypeScore=114.1665;InbreedingCoeff=0.4567;MQ=71.47;MQ0=14;MQRankSum=-3.571;QD=12.23;ReadPosRankSum=1.277;VQSLOD=4.5707;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:26:20.66:274,21,0	1/1:11,0:11:2.73:145,3,0	0/0:41,0:15:24.93:0,25,260	0/0:58,0:26:41.03:0,41,298	1/1:14,1:14:12.37:86,12,0	1/1:10,0:10:17.09:128,17,0	1/1:21,0:21:50.70:455,51,0	1/1:27,0:27:73.33:559,73,0	1/1:21,0:21:10.04:102,10,0	1/1:7,14:20:28.11:492,28,0	1/1:15,0:14:12.85:119,13,0	1/1:5,19:23:9.03:146,9,0	1/1:16,1:17:28.91:334,29,0	./.	0/0:20,0:20:28.06:0,28,416	1/1:3,10:13:9.50:167,10,0	0/1:21,0:21:99:211,0,158	1/1:3,10:13:6.02:111,6,0	1/1:23,1:24:54.34:489,54,0	1/1:2,9:11:3:50,3,0	1/1:27,0:26:34.17:305,34,0	1/1:4,11:15:2.81:18,3,0	1/1:15,0:15:20.73:149,21,0	1/1:22,0:22:30.32:316,30,0	0/1:22,0:22:58.66:199,0,59	0/1:17,0:15:5.45:151,0,5	0/0:22,0:22:14.34:0,14,221	0/1:10,0:7:21.39:106,0,21
chr10	20226533	.	AGC	A	5044.61	PASS	AB=0.900;AC=46;AF=0.821;AN=56;BaseQRankSum=-2.296;DP=558;FS=7.992;HRun=0;HaplotypeScore=100.1633;InbreedingCoeff=0.4695;MQ=73.78;MQ0=13;MQRankSum=-2.538;QD=11.57;ReadPosRankSum=0.651;VQSLOD=3.7409;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:25:26.46:326,26,0	1/1:10,0:10:23.92:210,24,0	0/0:42,0:16:25.27:0,25,261	0/0:59,0:27:41.76:0,42,312	1/1:16,0:15:17.94:163,18,0	1/1:8,0:8:15.83:125,16,0	1/1:20,1:21:51.72:407,52,0	1/1:28,0:28:79.49:583,79,0	0/1:19,0:19:8.58:43,0,9	1/1:19,0:18:26.91:364,27,0	1/1:14,1:15:15.46:101,15,0	1/1:22,1:22:8.92:64,9,0	1/1:16,0:16:31.19:277,31,0	0/1:13,0:13:0:0,0,0	0/0:21,0:21:41.67:0,42,383	1/1:12,0:12:0.03:56,0,0	0/1:22,0:22:13.65:299,0,14	1/1:11,0:11:5.98:46,6,0	1/1:26,0:26:56.86:484,57,0	1/1:10,0:10:3:28,3,0	1/1:26,0:25:46.45:373,46,0	1/1:12,0:12:2.94:18,3,0	1/1:12,0:12:17.89:135,18,0	1/1:20,0:20:29.51:223,30,0	1/1:24,0:24:10.44:279,10,0	1/1:14,3:15:21.14:283,21,0	0/1:7,14:21:31.18:31,0,63	1/1:10,0:7:15.92:126,16,0
chr10	20226535	.	CGA	C	1173.81	PASS	AB=0.995;AC=22;AF=0.393;AN=56;BaseQRankSum=1.484;DP=520;FS=2.404;HRun=0;HaplotypeScore=106.9723;InbreedingCoeff=0.0313;MQ=76.89;MQ0=13;MQRankSum=-2.408;QD=4.18;ReadPosRankSum=1.429;VQSLOD=2.7261;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:5.54:0,6,106	0/1:10,0:10:11.02:21,0,11	0/0:44,0:18:47.94:0,48,655	0/0:59,0:27:46.30:0,46,700	0/1:15,0:14:13.02:13,0,23	0/0:7,0:7:6.72:0,7,42	0/1:19,0:19:8.51:9,0,19	1/1:1,27:28:81.15:1053,81,0	0/1:20,0:20:5.59:6,0,81	0/1:19,0:18:39.27:39,0,68	0/0:13,0:13:3.61:0,4,26	1/1:21,0:20:5.54:25,6,0	0/1:11,0:12:5.37:40,0,5	0/1:12,0:12:0:0,0,0	0/0:18,0:18:42.14:0,42,689	0/1:12,0:12:13.51:25,0,14	0/0:21,0:21:11.93:0,12,171	1/1:10,0:10:5.49:24,5,0	0/1:22,0:22:11.86:12,0,12	1/1:10,0:10:2.68:11,3,0	0/0:23,0:22:4.94:0,5,46	0/1:12,0:12:0:0,0,0	0/1:11,0:11:1.35:1,0,18	0/1:15,0:15:3.95:13,0,4	0/0:22,0:22:9.25:0,9,99	0/1:14,0:12:29.68:30,0,49	0/1:19,0:19:2.91:3,0,185	0/0:10,0:7:2.91:0,3,23
chr10	20226752	.	C	CA	132.57	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-3.678;DP=410;FS=0.000;HRun=1;HaplotypeScore=45.9157;InbreedingCoeff=0.9283;MQ=74.61;MQ0=0;MQRankSum=1.615;QD=13.26;ReadPosRankSum=-3.730;VQSLOD=1.0175;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:78.21:0,78,966	0/0:5,0:5:15.05:0,15,194	0/0:12,0:12:26.67:0,27,321	0/0:16,0:16:36.02:0,36,402	0/0:9,0:9:27.07:0,27,334	0/0:20,0:20:57.15:0,57,708	0/0:21,0:21:57.16:0,57,710	1/1:1,9:10:23.87:226,24,0	0/0:17,0:17:51.09:0,51,608	0/0:14,0:14:42.11:0,42,499	0/0:9,0:9:27.05:0,27,308	0/0:18,0:18:50.67:0,51,551	0/0:15,0:15:45.10:0,45,549	0/0:19,0:19:51.08:0,51,586	0/0:21,0:21:60.07:0,60,698	0/0:7,0:7:18.03:0,18,216	0/0:23,0:23:66.18:0,66,823	0/0:22,0:22:63.18:0,63,799	0/0:13,0:13:33.08:0,33,392	0/0:19,0:19:51.13:0,51,618	0/0:17,0:17:51.17:0,51,659	0/0:18,0:18:51.12:0,51,613	0/0:14,0:14:42.12:0,42,529	0/0:11,0:11:33.07:0,33,385	0/0:6,0:6:18.06:0,18,233	0/0:8,0:8:18.05:0,18,219	0/0:13,0:12:36.08:0,36,432	0/0:4,0:4:12.03:0,12,142
chr10	20228875	.	T	TA	2418.47	PASS	AB=0.972;AC=40;AF=0.870;AN=46;BaseQRankSum=2.382;DP=176;FS=7.379;HRun=4;HaplotypeScore=38.4179;InbreedingCoeff=0.2245;MQ=95.42;MQ0=1;MQRankSum=-4.561;QD=18.60;ReadPosRankSum=4.177;VQSLOD=2.2906;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,2:3:6.02:82,6,0	./.	0/1:16,0:10:7.97:8,0,54	0/1:39,0:18:23.13:23,0,68	1/1:0,1:1:3.01:41,3,0	1/1:0,1:1:3.01:41,3,0	1/1:0,1:1:3.01:41,3,0	0/0:45,0:45:99:0,123,1352	1/1:0,2:2:6.02:76,6,0	1/1:1,6:7:17.95:202,18,0	1/1:1,1:2:5.93:58,6,0	1/1:0,1:1:3.01:41,3,0	./.	1/1:1,1:2:5.97:60,6,0	0/0:1,0:1:3.01:0,3,34	1/1:0,3:3:6.02:81,6,0	1/1:6,12:16:45.11:586,45,0	1/1:4,10:13:36.12:491,36,0	1/1:0,2:2:3.01:41,3,0	1/1:0,2:2:6.02:82,6,0	./.	./.	./.	1/1:2,0:2:5.93:58,6,0	1/1:0,3:3:9.03:123,9,0	1/1:0,4:4:12.04:164,12,0	1/1:0,1:1:3.01:41,3,0	1/1:0,5:5:15.05:205,15,0
chr10	20228904	.	C	CATAT	3561.46	PASS	AC=40;AF=0.833;AN=48;BaseQRankSum=5.139;DP=175;FS=7.086;HRun=0;HaplotypeScore=42.1490;InbreedingCoeff=0.5336;MQ=74.32;MQ0=2;MQRankSum=-5.559;QD=34.58;ReadPosRankSum=2.807;VQSLOD=2.6986;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,1:5:8.69:92,9,0	./.	0/0:11,0:8:12:0,12,146	0/0:15,0:9:9:0,9,94	1/1:0,1:5:3.01:53,3,0	./.	1/1:0,1:1:3.01:66,3,0	0/0:41,0:41:68.29:0,68,1365	1/1:1,4:5:9.03:211,9,0	1/1:2,5:7:18.06:440,18,0	1/1:1,2:3:3.01:76,3,0	1/1:0,2:2:6.02:152,6,0	1/1:1,0:1:3.01:50,3,0	1/1:0,2:3:6.02:152,6,0	0/0:3,0:3:9.02:0,9,129	1/1:1,1:2:3.01:76,3,0	1/1:1,13:16:33.09:747,33,0	1/1:6,10:15:24.08:541,24,0	1/1:0,5:4:9.03:228,9,0	1/1:1,5:6:9.03:228,9,0	1/1:3,0:3:0.47:1,0,0	./.	./.	1/1:0,1:1:3.01:76,3,0	1/1:2,0:5:3.01:53,3,0	1/1:6,0:7:10.93:88,11,0	1/1:1,0:4:3.01:53,3,0	1/1:3,0:5:12.04:181,12,0
chr10	20229784	.	AC	A	928.71	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.432;DP=672;FS=21.914;HRun=5;HaplotypeScore=66.1263;InbreedingCoeff=0.9979;MQ=86.83;MQ0=0;MQRankSum=-0.974;QD=25.80;ReadPosRankSum=-4.506;VQSLOD=1.0140;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,126,1686	0/0:10,0:10:27.08:0,27,354	0/0:24,0:24:60.71:0,61,779	0/0:33,1:32:46.29:0,46,1018	0/0:21,0:21:54.18:0,54,738	0/0:16,0:16:45.15:0,45,615	0/0:25,0:25:66.22:0,66,903	1/1:4,32:36:93.21:1024,93,0	0/0:17,0:17:48.14:0,48,637	0/0:30,0:30:90.29:0,90,1213	0/0:21,0:21:60.20:0,60,820	0/0:17,0:17:51.15:0,51,678	0/0:24,0:24:69.23:0,69,944	0/0:28,0:28:81.26:0,81,1091	0/0:24,0:24:72.24:0,72,984	0/0:16,0:16:48.13:0,48,624	0/0:33,0:33:99:0,99,1354	0/0:26,0:26:78.26:0,78,1062	0/0:25,0:25:72.22:0,72,953	0/0:24,0:24:66.20:0,66,869	0/0:32,0:32:96.32:0,96,1310	0/0:23,0:23:63.21:0,63,862	0/0:23,0:23:63.20:0,63,845	0/0:15,0:15:42.11:0,42,542	0/0:26,0:26:66.21:0,66,886	0/0:22,0:22:63.21:0,63,860	0/0:24,0:24:66.22:0,66,900	0/0:9,0:9:27.09:0,27,369
chr10	20230822	.	G	GA	17683.81	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=2.720;DP=723;FS=7.617;HRun=8;HaplotypeScore=104.8725;InbreedingCoeff=0.9269;MQ=76.30;MQ0=1;MQRankSum=-5.605;QD=27.16;ReadPosRankSum=3.129;VQSLOD=4.4992;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,28:29:81.17:921,81,0	1/1:3,11:14:18.77:302,19,0	0/0:20,1:21:16.24:0,16,226	0/0:19,0:20:41.04:0,41,369	1/1:7,36:43:74.69:1058,75,0	1/1:6,22:28:2.29:535,2,0	1/1:4,22:26:60.18:694,60,0	1/1:4,28:32:81.08:841,81,0	1/1:4,23:28:65.93:710,66,0	1/1:4,36:40:99:1250,108,0	1/1:3,20:23:54.12:610,54,0	1/1:3,17:20:45.11:509,45,0	1/1:1,25:25:63.12:712,63,0	1/1:1,21:22:63.12:712,63,0	0/0:29,0:30:83.06:0,83,742	1/1:3,19:22:51.15:590,51,0	1/1:0,9:9:27.08:313,27,0	1/1:2,15:17:36.11:417,36,0	1/1:7,16:23:35.61:646,36,0	1/1:5,31:36:65.82:1000,66,0	1/1:3,17:20:26.71:563,27,0	1/1:9,28:35:50.60:779,51,0	1/1:1,22:23:60.18:694,60,0	1/1:5,23:28:66.20:764,66,0	1/1:0,28:28:78.23:903,78,0	1/1:5,25:30:75.19:844,75,0	1/1:3,29:32:78.23:903,78,0	1/1:2,13:14:36.11:416,36,0
chr10	20231041	.	ACATAGAT	A	2033.33	PASS	AB=0.991;AC=19;AF=0.352;AN=54;BaseQRankSum=7.875;DP=942;FS=7.052;HRun=0;HaplotypeScore=277.4375;InbreedingCoeff=-0.1146;MQ=50.49;MQ0=11;MQRankSum=-10.739;QD=3.39;ReadPosRankSum=-4.370;VQSLOD=1.0345;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:28:28.47:0,28,730	0/1:17,0:15:74.37:74,0,367	0/0:34,0:15:44.82:0,45,1046	0/0:17,0:10:23.56:0,24,453	0/0:37,0:35:41.97:0,42,702	0/0:37,0:36:5.93:0,6,59	1/1:21,0:19:0.45:1,0,0	1/1:34,0:31:64.82:601,65,0	0/1:34,6:37:8.27:8,0,1413	0/1:48,0:47:99:239,0,1156	0/1:41,0:41:0:0,0,0	0/1:44,0:42:9.90:10,0,113	0/1:49,0:46:22.53:23,0,369	0/0:35,0:34:3.01:0,3,33	0/0:54,0:54:99:0,135,4308	0/1:45,0:45:1.86:2,0,185	0/1:19,0:18:24.82:25,0,43	0/1:19,0:19:46.19:79,0,46	0/1:13,0:12:99:113,0,255	0/1:52,0:52:24.69:81,0,25	0/0:34,0:32:6.02:0,6,84	0/1:42,0:40:0:0,0,0	0/1:30,0:30:0:0,0,0	./.	0/0:31,0:31:36.08:0,36,776	0/1:45,0:45:99:519,0,1335	0/1:40,0:37:99:400,0,985	0/0:17,0:16:33.41:0,33,647
chr10	20231042	.	CATAGATG	C	3199.22	PASS	AB=0.963;AC=19;AF=0.352;AN=54;BaseQRankSum=6.348;DP=949;FS=9.766;HRun=0;HaplotypeScore=272.7306;InbreedingCoeff=0.0287;MQ=50.58;MQ0=11;MQRankSum=-9.259;QD=5.99;ReadPosRankSum=-5.169;VQSLOD=0.2728;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,1:28:28.57:0,29,604	0/1:17,0:15:99:112,0,318	0/0:36,0:17:51.11:0,51,1165	0/0:19,0:11:15.54:0,16,481	0/0:34,3:35:19.93:0,20,381	0/0:34,3:36:2.94:0,3,18	1/1:21,0:19:3.46:25,3,0	1/1:34,0:31:80.86:961,81,0	0/0:40,0:37:9.59:0,10,1303	0/1:46,3:48:99:462,0,791	0/1:39,3:42:0:0,0,0	0/1:40,4:42:27.02:27,0,40	0/1:50,0:47:58.22:58,0,259	0/0:31,4:34:2.50:0,2,9	0/0:54,0:54:99:0,132,3623	0/0:45,1:45:8.01:0,8,159	0/1:19,0:18:38.43:44,0,38	0/1:16,2:18:8.27:119,0,8	0/1:12,0:11:99:160,0,178	1/1:48,5:53:17.39:210,17,0	0/0:33,1:32:5.87:0,6,35	0/1:40,3:41:0:0,0,0	0/1:29,1:30:0:0,0,0	./.	0/0:26,5:31:29.56:0,30,548	0/1:44,1:45:99:647,0,862	0/1:38,2:37:99:519,0,652	0/1:17,0:16:9.04:9,0,469
chr10	20231045	.	A	AGAT	3051.59	PASS	AB=0.809;AC=17;AF=0.327;AN=52;BaseQRankSum=0.963;DP=944;FS=4.982;HRun=0;HaplotypeScore=243.1040;InbreedingCoeff=0.0609;MQ=51.40;MQ0=10;MQRankSum=5.086;QD=6.29;ReadPosRankSum=1.229;VQSLOD=2.6933;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:1.19:0,1,479	0/0:10,0:15:25.48:0,25,303	0/0:38,0:19:57.17:0,57,838	0/0:20,0:11:24.08:0,24,359	0/0:29,0:34:37.89:0,38,464	1/1:9,22:33:2.29:64,2,0	1/1:5,16:20:0.47:1,0,0	0/0:19,0:20:50.36:0,50,333	0/1:36,1:36:5.43:5,0,813	0/1:48,0:50:13.16:1971,0,13	0/1:41,0:43:0:0,0,0	1/1:9,32:42:9.01:197,9,0	0/1:4,35:49:19.09:245,0,19	0/1:12,19:34:4.10:47,0,4	0/0:52,0:53:99:0,123,1946	0/0:13,28:46:8.72:0,9,109	0/1:5,11:19:11.28:53,0,11	0/1:4,14:20:30.69:57,0,31	0/1:12,0:12:59.60:351,0,60	0/0:51,0:52:5.82:0,6,33	0/1:3,32:36:17.54:120,0,18	./.	0/1:28,0:31:0:0,0,0	./.	0/0:27,0:31:34.67:0,35,511	0/1:40,0:43:81.99:82,0,1043	0/0:29,0:35:67.72:0,68,828	0/0:16,0:16:30.10:0,30,448
chr10	20231051	.	TACATACATA	T	3125.08	PASS	AB=0.852;AC=19;AF=0.352;AN=54;BaseQRankSum=1.247;DP=969;FS=5.823;HRun=0;HaplotypeScore=260.9396;InbreedingCoeff=0.1302;MQ=50.99;MQ0=29;MQRankSum=6.259;QD=5.77;ReadPosRankSum=0.916;VQSLOD=2.0751;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:35,0:29:13.39:13,0,475	0/0:16,0:14:26.76:0,27,310	0/0:37,0:21:57.17:0,57,838	0/0:19,0:11:24.08:0,24,359	0/0:37,0:34:37.90:0,38,464	1/1:34,0:33:5.94:113,6,0	1/1:20,0:18:0.47:1,0,0	0/0:22,0:17:50.24:0,50,328	0/1:40,0:36:5.42:5,0,816	0/1:15,38:50:4.98:2052,0,5	0/1:12,31:42:0:0,0,0	1/1:47,0:44:9.03:197,9,0	0/1:51,0:48:22.37:244,0,22	1/1:36,0:34:2.73:52,3,0	0/0:55,0:53:99:0,126,2044	0/0:45,0:44:8.48:0,8,111	0/1:21,0:20:13.26:44,0,13	0/1:21,0:21:25.14:56,0,25	0/1:9,6:13:53.87:292,0,54	0/0:15,35:50:8.73:0,9,77	0/1:46,0:44:13.36:122,0,13	./.	0/1:8,25:32:0:0,0,0	0/0:17,0:15:0:0,0,0	0/0:31,0:31:34.67:0,35,508	0/1:44,0:41:81.44:81,0,1081	0/0:36,0:30:66.96:0,67,817	0/0:16,0:15:35.39:0,35,507
chr10	20233027	.	G	GCA	1076.91	PASS	AB=0.837;AC=17;AF=0.327;AN=52;BaseQRankSum=-3.947;DP=561;FS=13.100;HRun=0;HaplotypeScore=125.8345;InbreedingCoeff=0.5000;MQ=61.69;MQ0=8;MQRankSum=2.869;QD=5.61;ReadPosRankSum=0.700;VQSLOD=2.1186;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:25,4:28:29.78:330,30,0	1/1:7,1:8:11.99:117,12,0	./.	./.	1/1:14,2:16:12:118,12,0	0/0:22,0:22:7.38:0,7,33	0/0:20,0:20:1.61:0,2,6	1/1:18,0:14:7.13:39,7,0	1/1:20,0:20:3.74:99,4,0	0/0:16,0:16:9.59:0,10,50	0/0:11,0:11:8.51:0,9,42	0/0:27,0:27:12.71:0,13,55	0/0:11,0:11:5.21:0,5,22	0/1:16,0:16:11.21:23,0,11	0/0:24,0:24:32.91:0,33,289	0/0:22,0:22:11.32:0,11,55	0/0:25,0:25:2.81:0,3,14	0/0:18,0:17:8.18:0,8,37	0/0:17,0:17:14.30:0,14,77	0/0:15,0:15:8.99:0,9,43	0/0:27,0:26:4.73:0,5,17	0/0:13,0:13:5.74:0,6,31	0/0:14,0:14:5.63:0,6,28	0/0:29,0:28:6.08:0,6,28	0/1:9,9:19:27.64:74,0,28	1/1:23,0:23:20.92:169,21,0	1/1:27,10:36:24.04:245,24,0	0/1:5,1:6:29.02:35,0,29
chr10	20233063	.	ACACACACTCTCT	A	3565.38	PASS	AB=0.994;AC=25;AF=0.446;AN=56;BaseQRankSum=4.194;DP=600;FS=13.922;HRun=0;HaplotypeScore=180.1388;InbreedingCoeff=-0.4892;MQ=53.57;MQ0=12;MQRankSum=-4.600;QD=8.37;ReadPosRankSum=1.714;VQSLOD=1.8017;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:28:99:169,0,1031	0/1:7,0:7:7.85:8,0,578	0/0:34,0:17:51.11:0,51,1422	0/0:37,0:15:38.67:0,39,963	0/1:21,0:21:42.76:43,0,696	0/1:21,0:21:13.57:14,0,17	0/1:19,0:19:83.88:506,0,84	0/1:26,0:23:99:789,0,249	0/1:12,0:12:29.47:29,0,512	0/1:18,1:19:71.21:567,0,71	0/1:13,0:13:7.37:24,0,7	0/1:20,0:20:69.58:111,0,70	0/1:11,0:11:13.67:25,0,14	1/1:13,0:13:11.67:78,12,0	0/0:25,0:25:69.24:0,69,2882	0/1:16,0:16:45.54:46,0,79	0/1:23,0:23:10.27:10,0,15	0/1:22,1:23:99:202,0,157	0/1:20,0:20:16.50:538,0,17	1/1:13,2:15:11.78:159,12,0	0/0:47,0:46:23.93:0,24,294	0/1:16,0:16:11.58:12,0,26	0/1:22,0:22:67.17:67,0,78	0/1:30,0:29:11.75:30,0,12	0/1:21,0:21:41.70:42,0,682	0/1:17,0:17:33.35:33,0,927	0/0:31,0:30:7.42:0,7,1346	0/1:11,0:11:63.06:63,0,247
chr10	20233065	.	ACACACTCTCT	A	5101.70	PASS	AB=0.993;AC=35;AF=0.625;AN=56;BaseQRankSum=1.970;DP=595;FS=4.662;HRun=0;HaplotypeScore=162.0230;InbreedingCoeff=-0.0689;MQ=57.92;MQ0=12;MQRankSum=-5.032;QD=10.95;ReadPosRankSum=0.743;VQSLOD=3.7920;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:29:99:189,0,799	0/1:8,0:8:26.74:27,0,475	0/0:35,0:19:54.15:0,54,1557	0/0:38,0:18:41.50:0,42,1120	0/1:20,0:20:67.26:67,0,502	1/1:21,0:21:9.02:100,9,0	1/1:19,0:19:12.43:563,12,0	0/1:26,0:23:99:789,0,152	0/1:12,0:12:90.25:90,0,355	1/1:18,1:19:27.08:693,27,0	1/1:13,0:13:8.62:95,9,0	0/1:18,1:19:19.15:270,0,19	1/1:12,0:12:6.02:85,6,0	1/1:12,1:13:12.04:200,12,0	0/0:26,0:26:72.18:0,72,2519	0/1:15,0:15:9.91:156,0,10	1/1:23,1:24:5.35:62,5,0	0/1:24,0:23:57.91:180,0,58	1/1:19,0:19:26.36:738,26,0	1/1:15,0:15:12.04:204,12,0	0/1:42,0:41:5.13:5,0,31	1/1:15,1:16:1.10:56,1,0	0/1:21,1:22:12.46:149,0,12	1/1:27,0:26:9.03:119,9,0	0/1:23,0:23:99:106,0,518	0/1:16,0:16:33.39:33,0,679	0/0:30,0:29:3.24:0,3,1011	0/1:11,0:11:99:125,0,186
chr10	20233067	.	ACACTCTCT	A	7181.27	PASS	AB=1.000;AC=41;AF=0.732;AN=56;BaseQRankSum=-1.406;DP=585;FS=0.000;HRun=0;HaplotypeScore=136.9340;InbreedingCoeff=0.1119;MQ=60.71;MQ0=12;MQRankSum=-5.355;QD=14.75;ReadPosRankSum=-0.232;VQSLOD=3.7150;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:26:99:192,0,507	0/1:9,0:9:46.19:46,0,328	0/0:36,0:20:60.17:0,60,1735	0/0:37,0:17:44.88:0,45,1221	0/1:21,0:21:99:110,0,325	1/1:4,15:19:9.03:235,9,0	1/1:18,0:18:32.09:661,32,0	0/1:26,0:23:76.62:795,0,77	0/1:12,0:12:98.08:98,0,176	1/1:4,15:19:47.88:846,48,0	1/1:0,14:14:9.03:229,9,0	1/1:7,12:19:14.91:417,15,0	1/1:1,11:12:6.49:175,6,0	1/1:3,9:12:12.04:302,12,0	0/0:25,0:25:23.52:0,24,2086	1/1:1,12:13:12.04:350,12,0	1/1:7,15:22:2.86:87,3,0	1/1:6,16:22:9.49:216,9,0	1/1:2,16:18:45.07:950,45,0	1/1:5,11:16:12.04:325,12,0	1/1:45,0:44:14.98:153,15,0	1/1:3,12:15:9.03:190,9,0	1/1:1,18:19:9.02:217,9,0	1/1:4,21:25:9.03:254,9,0	0/1:23,0:23:99:107,0,383	0/1:18,0:18:73.67:74,0,317	0/1:31,0:30:10.20:10,0,679	0/1:11,0:11:99:144,0,141
chr10	20233069	.	ACTCTCT	A	5887.06	PASS	AB=0.983;AC=42;AF=0.750;AN=56;BaseQRankSum=0.710;DP=561;FS=0.994;HRun=0;HaplotypeScore=122.0107;InbreedingCoeff=0.1389;MQ=63.06;MQ0=12;MQRankSum=-5.341;QD=12.77;ReadPosRankSum=-0.083;VQSLOD=3.9653;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:24:99:199,0,242	0/1:9,0:9:46.23:46,0,184	0/0:37,0:21:63.17:0,63,1736	0/0:38,0:18:47.54:0,48,1267	0/1:21,0:21:99:130,0,164	1/1:19,0:19:9.03:137,9,0	1/1:13,1:17:30.10:650,30,0	1/1:9,15:22:41.95:850,42,0	0/1:11,1:12:49.71:144,0,50	1/1:19,0:19:38.88:722,39,0	1/1:14,0:14:9:131,9,0	1/1:14,1:15:14.78:280,15,0	1/1:12,0:12:6.49:110,6,0	1/1:11,1:12:12.04:199,12,0	0/0:25,0:25:63.22:0,63,1818	1/1:12,0:12:12.04:219,12,0	1/1:19,0:19:2.99:55,3,0	1/1:19,0:18:9.03:168,9,0	1/1:18,0:18:42.09:795,42,0	1/1:15,0:15:12.04:219,12,0	1/1:15,26:40:2.98:22,3,0	1/1:15,0:15:8.06:95,8,0	1/1:19,0:19:9.03:146,9,0	1/1:24,0:24:9.03:155,9,0	0/1:23,0:23:99:111,0,234	0/1:15,1:16:59.15:94,0,59	0/1:30,0:29:31.68:32,0,328	0/1:11,0:11:89.45:177,0,89
chr10	20234276	.	T	TA	6418.63	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-12.458;DP=661;FS=7.246;HRun=1;HaplotypeScore=60.7829;InbreedingCoeff=0.9979;MQ=84.08;MQ0=0;MQRankSum=-3.404;QD=40.88;ReadPosRankSum=-1.164;VQSLOD=4.7669;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,41:41:99:1662,111,0	1/1:0,11:11:33.11:495,33,0	0/0:21,0:21:60.12:0,60,728	0/0:18,0:18:54.17:0,54,691	1/1:1,18:19:51.10:715,51,0	0/0:15,0:15:45.15:0,45,583	0/0:26,0:26:75.24:0,75,970	1/1:0,20:20:60.15:835,60,0	0/0:23,0:23:69.19:0,69,863	0/0:21,0:21:63.20:0,63,817	0/0:6,0:6:18.06:0,18,234	0/0:28,0:28:81.25:0,81,1036	0/0:29,0:29:87.28:0,87,1125	0/0:35,0:35:99:0,102,1323	0/0:40,0:40:99:0,120,1544	0/0:21,0:21:57.18:0,57,739	0/0:35,0:35:99:0,102,1309	0/0:35,0:35:96.25:0,96,1208	0/0:12,0:12:36.12:0,36,467	0/0:25,0:25:69.19:0,69,866	0/0:39,0:39:97.36:0,97,1375	0/0:16,0:16:48.11:0,48,589	0/0:19,0:19:48.16:0,48,623	0/0:40,0:40:99:0,111,1409	1/1:0,12:12:36.12:539,36,0	1/1:1,24:25:72.17:1004,72,0	1/1:2,20:22:57.19:854,57,0	1/1:0,7:7:21.07:315,21,0
chr10	20234736	.	TC	T	6959.14	PASS	AB=0.851;AC=37;AF=0.661;AN=56;BaseQRankSum=-3.681;DP=495;FS=7.356;HRun=10;HaplotypeScore=60.6784;InbreedingCoeff=0.7769;MQ=78.31;MQ0=0;MQRankSum=-1.615;QD=18.91;ReadPosRankSum=4.002;VQSLOD=5.6620;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:15:20.85:0,21,149	0/0:3,0:8:11.86:0,12,108	0/0:19,0:16:14.77:0,15,197	0/0:24,0:21:15.67:0,16,303	0/0:8,0:11:20.04:0,20,125	1/1:2,21:23:62.98:547,63,0	1/1:3,18:22:50.02:423,50,0	0/1:19,4:23:41.67:42,0,237	1/1:2,14:16:41.99:364,42,0	1/1:1,14:15:15.78:330,16,0	1/1:2,9:11:26.98:234,27,0	1/1:3,26:29:48.97:599,49,0	1/1:4,14:18:32.85:286,33,0	1/1:4,18:22:50.97:443,51,0	0/0:18,1:20:18.84:0,19,399	1/1:3,15:19:38.99:339,39,0	1/1:2,20:22:56.98:495,57,0	1/1:2,16:18:47.26:416,47,0	1/1:1,10:11:26.02:214,26,0	1/1:0,16:16:35.97:312,36,0	1/1:4,32:36:89.98:781,90,0	1/1:4,10:14:29.89:246,30,0	1/1:2,18:20:17.76:376,18,0	1/1:1,19:20:56.99:495,57,0	0/0:3,0:15:22.73:0,23,114	0/1:4,1:9:2.70:3,0,112	0/0:3,0:14:31.85:0,32,217	0/1:1,1:4:14.36:14,0,50
chr10	20235648	.	GGT	G	1237.89	PASS	AB=0.957;AC=33;AF=0.660;AN=50;BaseQRankSum=-2.539;DP=648;FS=0.000;HRun=0;HaplotypeScore=84.9885;InbreedingCoeff=0.6489;MQ=70.53;MQ0=18;MQRankSum=1.107;QD=3.29;ReadPosRankSum=2.137;VQSLOD=1.8895;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:33:14.98:0,15,124	0/0:12,0:12:8.85:0,9,60	./.	./.	0/0:2,0:18:10.07:0,10,64	1/1:24,2:28:20.68:189,21,0	1/1:26,2:27:14.84:127,15,0	./.	0/1:21,1:22:42.02:42,0,118	1/1:18,1:19:5.13:55,5,0	1/1:8,5:13:3.01:32,3,0	1/1:16,4:23:17.71:157,18,0	1/1:15,0:18:2.84:14,3,0	1/1:11,1:12:3.01:32,3,0	0/0:21,0:21:12.04:0,12,174	1/1:19,5:24:12.03:129,12,0	1/1:14,0:20:8.52:42,9,0	1/1:13,5:19:14.87:143,15,0	1/1:17,2:19:3.01:32,3,0	1/1:13,5:18:9.02:97,9,0	1/1:42,8:49:9.02:97,9,0	1/1:19,2:21:8.24:72,8,0	1/1:12,0:14:2.84:14,3,0	1/1:18,7:26:14.87:143,15,0	0/0:18,0:18:8.98:0,9,73	0/0:30,0:30:24.01:0,24,239	0/0:16,0:16:8.86:0,9,64	0/0:13,0:13:11.99:0,12,101
chr10	20235649	.	G	GTA	1722.07	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=-2.096;DP=670;FS=8.608;HRun=0;HaplotypeScore=104.9352;InbreedingCoeff=0.8847;MQ=68.07;MQ0=18;MQRankSum=-2.664;QD=9.62;ReadPosRankSum=-3.537;VQSLOD=2.0376;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:37,0:36:3.74:36,0,4	1/1:12,0:12:26.36:274,26,0	0/0:41,0:19:43.37:0,43,492	0/0:40,0:20:49.57:0,50,447	1/1:19,0:18:6.02:68,6,0	0/0:28,0:28:68.36:0,68,561	0/0:29,0:28:75.04:0,75,617	1/1:28,0:27:58.40:495,58,0	0/0:25,0:25:59.78:0,60,552	0/0:20,0:20:48.49:0,48,448	0/0:14,0:14:20.93:0,21,165	0/0:24,0:24:52.65:0,53,429	0/0:18,0:18:38.39:0,38,277	0/0:14,0:14:26.94:0,27,216	0/0:24,0:24:53.95:0,54,500	0/0:24,0:24:56.91:0,57,468	0/0:22,0:21:41.82:0,42,329	0/0:19,0:19:50.78:0,51,399	0/0:20,0:20:44.22:0,44,368	0/0:18,0:18:28.72:0,29,306	0/0:48,0:47:99:0,111,886	0/0:22,0:21:50.65:0,51,401	0/0:14,0:14:35.21:0,35,270	0/0:27,0:27:65.86:0,66,533	1/1:3,17:21:6.02:115,6,0	1/1:31,0:31:72.74:612,73,0	1/1:3,12:18:9.26:129,9,0	1/1:4,9:13:14.96:182,15,0
chr10	20235919	.	A	AG	21995.54	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-10.654;DP=661;FS=0.000;HRun=2;HaplotypeScore=60.3092;InbreedingCoeff=0.9925;MQ=91.10;MQ0=0;MQRankSum=-8.876;QD=37.79;ReadPosRankSum=4.800;VQSLOD=5.1284;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,26:28:81.27:1161,81,0	1/1:1,11:12:27.09:388,27,0	0/0:32,0:32:81.22:0,81,960	0/0:23,0:23:56.51:0,57,654	1/1:1,23:24:63.13:880,63,0	1/1:0,30:30:84.28:1209,84,0	1/1:2,20:22:45.15:648,45,0	1/1:1,34:35:99:1390,99,0	1/1:1,27:28:75.25:1080,75,0	1/1:4,26:30:75.24:1057,75,0	1/1:0,13:13:33.11:473,33,0	1/1:1,28:29:69.23:993,69,0	1/1:0,22:22:66.22:950,66,0	1/1:3,22:25:66.22:945,66,0	0/0:24,0:24:69.20:0,69,834	1/1:2,17:19:44.98:648,45,0	1/1:1,25:26:69.23:994,69,0	1/1:2,7:9:21.07:302,21,0	1/1:2,19:21:57.19:821,57,0	1/1:1,26:27:75.17:1027,75,0	1/1:1,32:33:84.28:1210,84,0	1/1:0,21:21:63.21:907,63,0	1/1:0,26:26:78.26:1108,78,0	1/1:2,20:22:48.16:691,48,0	1/1:0,17:17:42.14:605,42,0	1/1:2,28:30:84.25:1169,84,0	1/1:1,27:28:78.26:1122,78,0	1/1:0,5:5:15.05:216,15,0
chr10	20236663	.	AATACACACAC	A	9189.58	PASS	AB=0.651;AC=31;AF=0.574;AN=54;BaseQRankSum=8.541;DP=479;FS=8.967;HRun=0;HaplotypeScore=129.8389;InbreedingCoeff=0.7289;MQ=64.89;MQ0=4;MQRankSum=-6.469;QD=30.33;ReadPosRankSum=4.230;VQSLOD=3.4983;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:24:44.71:0,45,462	0/0:4,0:4:9.02:0,9,307	0/0:23,0:20:50.27:0,50,794	0/0:22,0:16:47.82:0,48,664	0/0:14,0:14:18.02:0,18,392	1/1:0,22:24:36.04:1083,36,0	1/1:1,20:22:30.10:985,30,0	0/0:19,0:18:54.07:0,54,1204	0/1:0,0:24:27.13:37,0,27	1/1:0,18:19:53.91:1033,54,0	1/1:2,3:15:12:301,12,0	1/1:9,5:15:35.78:713,36,0	1/1:0,18:20:17.85:522,18,0	1/1:0,8:8:11.63:399,12,0	0/0:19,0:19:57.12:0,57,2236	1/1:1,24:26:24.08:781,24,0	1/1:1,13:14:12:322,12,0	0/1:1,15:16:83.33:193,0,83	1/1:0,14:14:40.72:747,41,0	1/1:3,22:25:33.07:1026,33,0	./.	1/1:0,13:14:20.93:441,21,0	1/1:0,12:12:9.03:301,9,0	1/1:1,18:19:11.89:236,12,0	0/0:13,0:13:18:0,18,320	0/1:14,1:14:67.70:68,0,832	0/0:10,0:10:27:0,27,593	0/0:5,0:4:12:0,12,300
chr10	20236665	.	T	TACACACACAC	3468.11	PASS	AB=0.769;AC=15;AF=0.288;AN=52;BaseQRankSum=-6.850;DP=504;FS=0.000;HRun=0;HaplotypeScore=180.8723;InbreedingCoeff=0.7061;MQ=60.27;MQ0=5;MQRankSum=-1.209;QD=25.69;ReadPosRankSum=-6.152;VQSLOD=1.1492;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:29,3:32:9.03:400,9,0	1/1:2,1:5:9.03:361,9,0	0/0:23,0:19:2.97:0,3,21	./.	1/1:17,1:20:2.26:148,2,0	0/0:24,0:24:33.11:0,33,760	0/0:21,0:21:30.10:0,30,648	1/1:21,0:20:18.45:263,18,0	0/0:24,0:24:25.90:0,26,563	0/0:19,0:19:24.05:0,24,483	0/0:15,0:15:9.03:0,9,191	0/0:14,0:14:14.94:0,15,294	0/0:20,0:20:17.77:0,18,364	0/0:8,0:8:11.80:0,12,210	0/0:18,0:19:36.12:0,36,997	0/0:25,0:25:21.96:0,22,447	0/0:14,0:13:9.03:0,9,162	0/0:19,0:19:4.45:0,4,124	0/0:14,0:14:14.72:0,15,262	0/0:23,0:22:30.10:0,30,674	./.	0/0:14,0:14:12.04:0,12,271	0/0:12,0:12:8.82:0,9,173	0/0:18,0:18:6.02:0,6,139	1/1:17,0:17:15.05:615,15,0	0/1:14,2:18:42.60:703,0,43	1/1:14,0:14:21.07:858,21,0	1/1:5,0:4:6:121,6,0
chr10	20236909	.	A	AAT	16432.39	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-7.852;DP=445;FS=1.565;HRun=0;HaplotypeScore=46.6809;InbreedingCoeff=0.9642;MQ=79.40;MQ0=0;MQRankSum=-5.139;QD=40.18;ReadPosRankSum=3.067;VQSLOD=6.8053;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,22:25:63.22:1068,63,0	1/1:1,4:5:12.04:204,12,0	0/0:16,0:16:38.74:0,39,445	0/0:6,0:6:15.05:0,15,195	1/1:1,12:13:33.11:559,33,0	1/1:2,17:19:48.16:816,48,0	1/1:7,12:19:27.09:459,27,0	1/1:7,21:29:66.19:1066,66,0	1/1:1,20:21:57.20:969,57,0	1/1:4,20:24:63.22:1061,63,0	1/1:0,17:17:45.15:765,45,0	1/1:0,9:9:24.08:408,24,0	1/1:1,11:13:33.11:561,33,0	1/1:1,13:14:27.09:457,27,0	0/0:14,0:14:36.12:0,36,468	1/1:2,13:15:33.11:561,33,0	1/1:2,12:14:33.11:561,33,0	1/1:1,13:14:39.13:663,39,0	1/1:4,17:21:51.17:868,51,0	1/1:4,13:17:39.13:651,39,0	1/1:5,14:19:39.13:664,39,0	1/1:3,9:12:24.08:408,24,0	1/1:2,13:15:39.13:663,39,0	1/1:2,11:13:27.09:459,27,0	1/1:0,12:13:33.11:561,33,0	1/1:3,31:33:90.31:1520,90,0	1/1:0,7:7:15.05:255,15,0	1/1:2,4:7:12.04:204,12,0
chr10	20237102	.	TA	T	8864.59	PASS	AB=0.904;AC=52;AF=0.929;AN=56;BaseQRankSum=6.128;DP=402;FS=0.819;HRun=8;HaplotypeScore=110.0392;InbreedingCoeff=0.5825;MQ=56.05;MQ0=2;MQRankSum=-4.880;QD=22.79;ReadPosRankSum=2.118;VQSLOD=4.5118;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,16:21:39.06:377,39,0	1/1:0,7:7:18.03:174,18,0	0/1:6,1:6:42.45:42,0,94	0/1:13,1:10:0.36:0,0,206	1/1:4,26:30:72.10:695,72,0	1/1:1,14:15:39.06:377,39,0	1/1:1,7:8:21.03:203,21,0	1/1:3,22:22:60.04:569,60,0	1/1:3,15:18:42.07:405,42,0	1/1:0,17:17:51.08:493,51,0	1/1:4,10:14:27.04:261,27,0	1/1:0,10:10:30.05:290,30,0	1/1:1,10:11:30.05:289,30,0	1/1:1,13:14:36.06:347,36,0	0/0:13,0:13:36.11:0,36,435	1/1:2,6:8:18.02:174,18,0	1/1:2,20:22:60.10:579,60,0	1/1:2,14:16:42.07:406,42,0	1/1:3,7:8:18.03:174,18,0	1/1:4,17:21:51.08:492,51,0	1/1:0,4:4:6:58,6,0	1/1:0,5:5:15.02:145,15,0	1/1:2,17:19:51.08:492,51,0	1/1:0,14:14:33.05:318,33,0	1/1:0,16:16:45.07:434,45,0	1/1:4,14:18:42.06:405,42,0	1/1:1,17:18:51.08:492,51,0	1/1:1,6:7:18.03:174,18,0
chr10	20237118	.	TTC	T	511.03	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-3.211;DP=449;FS=8.736;HRun=0;HaplotypeScore=183.4356;InbreedingCoeff=0.9464;MQ=61.93;MQ0=1;MQRankSum=-2.490;QD=21.29;ReadPosRankSum=-2.345;VQSLOD=2.7907;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:51.17:0,51,878	0/0:8,0:8:21.07:0,21,363	0/0:26,0:16:38.32:0,38,572	0/0:39,0:26:32.31:0,32,805	0/0:26,0:26:69.22:0,69,1160	0/0:12,0:12:33.10:0,33,522	0/0:11,0:11:15.05:0,15,257	1/1:8,16:22:48.05:606,48,0	0/0:16,0:16:45.15:0,45,774	0/0:18,0:18:42.14:0,42,716	0/0:13,0:13:30.10:0,30,501	0/0:12,0:12:33.10:0,33,521	0/0:16,0:16:48.16:0,48,822	0/0:16,0:16:48.16:0,48,818	0/0:14,0:14:36.11:0,36,592	0/0:8,0:8:21.07:0,21,349	0/0:19,0:19:38.88:0,39,543	0/0:15,0:15:39.04:0,39,604	0/0:8,0:8:24.08:0,24,415	0/0:17,0:17:36.12:0,36,622	0/0:6,0:6:15.05:0,15,259	0/0:10,0:10:27.09:0,27,466	0/0:16,0:16:42.14:0,42,722	0/0:13,0:13:21.05:0,21,329	0/0:20,0:20:57.19:0,57,939	0/0:16,0:16:48.16:0,48,825	0/0:20,0:20:51.15:0,51,852	0/0:7,0:7:18.05:0,18,284
chr10	20237144	.	GTC	G	1493.93	PASS	AB=0.995;AC=34;AF=0.607;AN=56;BaseQRankSum=0.527;DP=496;FS=5.594;HRun=0;HaplotypeScore=213.5292;InbreedingCoeff=0.1836;MQ=62.14;MQ0=6;MQRankSum=-1.816;QD=4.49;ReadPosRankSum=-3.127;VQSLOD=2.3294;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:23:4.48:24,0,4	0/0:7,0:7:2.03:0,2,4	0/0:48,0:21:15.16:0,15,473	0/0:73,0:45:34.77:0,35,714	0/1:21,0:21:5.56:132,0,6	1/1:7,1:8:6.98:87,7,0	1/1:12,1:13:3.41:64,3,0	1/1:21,1:21:23.52:135,24,0	1/1:18,1:19:11.58:130,12,0	0/1:17,0:17:10.36:88,0,10	0/1:13,0:13:3.93:72,0,4	0/1:12,0:12:21.29:43,0,21	0/1:16,0:16:18.65:19,0,26	0/1:14,1:15:0.34:90,0,0	0/0:11,0:11:30.10:0,30,510	0/1:10,0:10:4.18:25,0,4	0/1:16,0:16:1.49:1,0,2	1/1:10,0:10:14.36:77,14,0	1/1:10,0:9:8.08:25,8,0	1/1:16,0:16:9.28:194,9,0	1/1:8,0:8:1.17:31,1,0	0/1:12,0:12:10.18:26,0,10	1/1:18,0:18:15.73:213,16,0	1/1:11,0:11:1.44:27,1,0	0/0:23,0:23:13.47:0,13,30	1/1:19,0:19:21.41:115,21,0	0/1:19,0:19:0.73:35,0,1	0/1:5,0:5:0.20:0,0,1
chr10	20237152	.	C	CTG	4074.29	PASS	AB=1.000;AC=49;AF=0.875;AN=56;BaseQRankSum=7.952;DP=505;FS=3.988;HRun=0;HaplotypeScore=223.8519;InbreedingCoeff=0.7991;MQ=58.68;MQ0=6;MQRankSum=-8.001;QD=10.95;ReadPosRankSum=4.503;VQSLOD=3.2085;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:21:33.27:159,33,0	1/1:8,0:8:12.41:45,12,0	0/0:51,0:20:41.59:0,42,549	0/0:68,0:43:68.25:0,68,859	1/1:20,0:20:30.89:230,31,0	1/1:9,0:9:13.73:106,14,0	1/1:13,2:15:15.40:101,15,0	1/1:15,5:20:43.25:481,43,0	1/1:16,1:17:35.12:225,35,0	1/1:19,0:19:37.97:263,38,0	1/1:12,1:13:20.76:125,21,0	1/1:11,1:12:3.84:77,4,0	1/1:19,0:19:34.30:134,34,0	1/1:13,1:14:24.32:155,24,0	0/0:13,0:13:36.11:0,36,529	1/1:10,1:11:24.48:108,24,0	1/1:16,0:16:32.26:130,32,0	1/1:10,1:11:20.41:190,20,0	0/1:8,0:7:0.92:75,0,1	1/1:19,0:19:30.42:246,30,0	1/1:10,1:11:7.16:48,7,0	1/1:12,0:12:17.20:81,17,0	1/1:14,4:18:28.85:248,29,0	1/1:10,1:11:14.04:101,14,0	1/1:23,0:23:30.16:101,30,0	1/1:20,1:21:58.59:379,59,0	1/1:18,1:19:44.81:222,45,0	1/1:5,0:5:12.40:45,12,0
chr10	20237158	.	C	CTT	6595.06	PASS	AB=1.000;AC=49;AF=0.875;AN=56;BaseQRankSum=7.836;DP=487;FS=4.081;HRun=1;HaplotypeScore=209.7271;InbreedingCoeff=0.8232;MQ=57.00;MQ0=5;MQRankSum=-9.858;QD=17.68;ReadPosRankSum=-0.128;VQSLOD=2.2177;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,3:22:58.87:408,59,0	1/1:5,1:6:17.68:110,18,0	0/0:43,0:18:32.69:0,33,491	0/0:57,0:41:56.06:0,56,782	1/1:18,2:20:36.86:210,37,0	1/1:8,0:8:20.48:123,20,0	1/1:11,2:13:26.25:191,26,0	1/1:20,2:22:50.60:507,51,0	1/1:16,0:16:44.22:299,44,0	1/1:13,3:16:30.14:370,30,0	1/1:12,0:12:25.86:137,26,0	1/1:13,1:14:34.06:225,34,0	1/1:15,3:18:46.56:377,47,0	1/1:11,2:13:38.01:255,38,0	0/0:13,0:13:39.13:0,39,595	1/1:10,1:11:32.26:192,32,0	1/1:16,1:17:44.35:339,44,0	1/1:9,1:10:23.68:179,24,0	0/1:12,0:11:18.59:225,0,19	1/1:15,3:18:46.61:295,47,0	1/1:7,4:11:21.83:130,22,0	1/1:11,2:13:35.09:213,35,0	1/1:16,2:18:46.38:270,46,0	1/1:12,1:13:14.84:80,15,0	1/1:23,3:26:67.47:410,67,0	1/1:18,3:21:62.56:556,63,0	1/1:17,1:18:52.97:399,53,0	1/1:5,0:5:14.76:93,15,0
chr10	20237180	.	T	TCC	1303.90	PASS	AB=0.993;AC=26;AF=0.464;AN=56;BaseQRankSum=3.739;DP=431;FS=7.770;HRun=2;HaplotypeScore=194.9838;InbreedingCoeff=-0.3364;MQ=56.48;MQ0=0;MQRankSum=-5.000;QD=3.93;ReadPosRankSum=3.480;VQSLOD=-0.6828;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:26,1:27:88.05:88,0,250	0/1:6,0:6:22.32:22,0,52	0/0:18,0:15:31.63:0,32,466	0/0:27,0:22:47.83:0,48,639	1/1:15,0:15:10.42:46,10,0	1/1:8,1:9:21.48:100,21,0	0/1:18,0:18:60.57:103,0,61	0/0:21,0:21:48.06:0,48,504	0/1:9,1:10:11.28:100,0,11	0/1:20,0:20:55.28:55,0,137	1/1:14,0:14:3.98:31,4,0	1/1:15,0:15:25.56:134,26,0	0/1:16,0:16:64.32:64,0,82	0/1:15,0:15:63.66:66,0,64	0/0:17,0:17:51.16:0,51,732	0/1:13,0:13:54.13:54,0,70	0/1:14,0:14:62.34:62,0,71	0/1:7,0:7:27.71:28,0,70	0/0:10,1:11:7.28:0,7,130	0/1:15,0:15:27.58:31,0,28	0/1:15,0:15:29.74:30,0,97	0/1:14,0:14:39.34:39,0,82	0/1:14,0:14:35.96:91,0,36	0/1:8,0:8:13.88:14,0,47	0/1:26,0:26:81.04:139,0,81	0/1:18,0:18:56.95:57,0,89	0/1:23,0:23:46.02:120,0,46	0/0:5,0:5:6.10:0,6,127
chr10	20237183	.	T	TCC	10159.70	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=3.083;DP=407;FS=0.629;HRun=2;HaplotypeScore=153.3374;InbreedingCoeff=0.8843;MQ=56.74;MQ0=0;MQRankSum=-6.856;QD=28.86;ReadPosRankSum=1.414;VQSLOD=4.6014;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:12,14:26:38.12:597,38,0	1/1:3,4:7:13.32:195,13,0	0/0:16,0:14:31.61:0,32,488	0/0:22,0:19:30.49:0,30,596	1/1:5,8:13:14.63:218,15,0	1/1:2,7:9:24.08:381,24,0	1/1:3,16:20:28.26:558,28,0	1/1:18,0:18:37.88:227,38,0	1/1:2,8:10:26.60:431,27,0	1/1:9,9:18:31.58:544,32,0	1/1:3,9:12:21.01:286,21,0	1/1:1,13:14:39.13:615,39,0	1/1:5,11:16:27.65:481,28,0	1/1:7,9:16:33.86:533,34,0	0/0:17,0:17:51.17:0,51,825	1/1:2,11:14:24.63:437,25,0	1/1:6,7:13:36.31:434,36,0	1/1:3,4:7:15.73:207,16,0	1/1:6,3:9:14.98:188,15,0	1/1:6,7:13:17.56:287,18,0	1/1:6,9:15:12.93:236,13,0	1/1:6,8:14:25.24:325,25,0	1/1:1,11:12:30.81:487,31,0	1/1:4,4:8:13.23:167,13,0	1/1:7,19:26:54.89:833,55,0	1/1:6,11:17:45.47:626,45,0	1/1:3,18:21:53.10:849,53,0	1/1:4,0:4:1.52:17,2,0
chr10	20237186	.	A	AC	3582.13	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=7.017;DP=418;FS=1.438;HRun=7;HaplotypeScore=174.4014;InbreedingCoeff=0.8437;MQ=55.47;MQ0=0;MQRankSum=-7.586;QD=9.76;ReadPosRankSum=1.478;VQSLOD=0.7030;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:27,1:28:32.47:223,32,0	1/1:7,0:7:11.43:58,11,0	0/0:14,0:13:24.03:0,24,231	0/0:19,0:17:33.35:0,33,300	1/1:13,0:13:6.57:55,7,0	1/1:10,0:10:25.76:133,26,0	1/1:19,0:19:34.27:177,34,0	1/1:5,15:20:42.13:503,42,0	1/1:11,0:11:24.28:120,24,0	1/1:18,0:18:16.39:118,16,0	1/1:12,0:12:19.87:128,20,0	1/1:15,0:15:40.17:216,40,0	1/1:17,0:17:31.27:164,31,0	1/1:15,1:16:34.55:184,35,0	0/0:17,0:17:48.08:0,48,463	1/1:14,0:14:28.67:150,29,0	1/1:13,1:14:16.84:128,17,0	1/1:8,0:8:14.39:81,14,0	1/1:11,0:11:8.52:43,9,0	1/1:12,0:12:18:88,18,0	1/1:15,0:15:14.24:72,14,0	1/1:14,0:14:17.15:86,17,0	1/1:12,0:12:28.49:142,28,0	1/1:8,0:8:8.15:42,8,0	1/1:26,0:26:43.10:228,43,0	1/1:18,0:19:23.09:157,23,0	1/1:21,0:21:51.81:260,52,0	1/1:7,0:7:4.35:27,4,0
chr10	20238203	.	AT	A	3030.61	PASS	AB=0.556;AC=13;AF=0.232;AN=56;BaseQRankSum=11.503;DP=491;FS=2.462;HRun=6;HaplotypeScore=47.0976;InbreedingCoeff=0.8505;MQ=68.82;MQ0=0;MQRankSum=-0.911;QD=23.31;ReadPosRankSum=2.544;VQSLOD=2.8259;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,37:39:96.24:1032,96,0	1/1:1,3:4:9.02:97,9,0	0/0:10,0:10:19.94:0,20,218	0/0:11,0:9:5.60:0,6,164	1/1:3,15:18:42.10:450,42,0	0/0:24,0:24:69.22:0,69,905	0/0:15,0:15:45.15:0,45,592	0/0:35,0:35:96.31:0,96,1251	0/0:20,0:20:54.16:0,54,696	0/0:19,0:19:48.14:0,48,607	0/0:19,0:19:54.16:0,54,694	0/0:11,0:11:27.09:0,27,355	0/0:16,0:16:45.15:0,45,590	0/0:24,0:24:72.23:0,72,943	0/0:17,0:17:48.14:0,48,615	0/0:14,0:14:41.97:0,42,527	0/0:19,0:19:54.14:0,54,678	0/0:17,0:17:48.16:0,48,632	0/0:20,0:20:54.16:0,54,683	0/0:31,0:31:81.25:0,81,1050	0/0:6,0:6:12.04:0,12,158	0/0:10,0:10:30.06:0,30,363	0/0:17,0:17:45.15:0,45,590	0/0:6,0:6:18.06:0,18,237	1/1:2,22:24:54.13:580,54,0	0/1:5,20:25:15.82:541,0,16	1/1:1,15:16:39.10:419,39,0	1/1:0,4:4:9.02:97,9,0
chr10	20240559	.	A	AGTGT	567.34	PASS	AB=1.000;AC=25;AF=0.463;AN=54;BaseQRankSum=-1.562;DP=485;FS=11.045;HRun=0;HaplotypeScore=156.6559;InbreedingCoeff=0.2880;MQ=59.67;MQ0=13;MQRankSum=-1.305;QD=2.02;ReadPosRankSum=4.244;VQSLOD=2.0854;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:19:0.47:2,0,0	0/0:6,0:6:2.93:0,3,25	./.	0/1:31,0:17:0:0,0,0	0/1:13,0:12:0:0,0,0	0/1:18,0:18:5.73:11,0,6	0/0:24,0:23:4.06:0,4,11	1/1:24,0:23:5.33:27,5,0	0/0:11,0:11:2.37:0,2,8	1/1:14,1:15:9.50:154,9,0	0/0:18,0:18:7.83:0,8,26	0/1:24,0:24:20.33:112,0,20	1/1:16,0:16:9:91,9,0	0/0:19,0:17:7:0,7,24	0/0:15,0:15:0.89:0,1,2	0/0:16,0:16:7.11:0,7,25	1/1:14,0:14:2.96:66,3,0	1/1:10,0:10:3.01:68,3,0	1/1:24,0:23:3.01:37,3,0	0/1:16,0:16:2.56:50,0,3	1/1:16,0:16:3.01:40,3,0	0/1:14,0:14:1.57:2,0,6	0/0:13,0:11:2.37:0,2,8	0/0:25,6:29:2.90:0,3,16	0/0:16,0:16:7.91:0,8,34	0/1:20,0:20:5.01:5,0,40	0/0:11,0:11:2.99:0,3,25	1/1:6,0:6:4.83:43,5,0
chr10	20241188	.	TCACACACACACACACACACACACA	T	5883.42	PASS	AB=0.870;AC=32;AF=0.571;AN=56;BaseQRankSum=4.940;DP=464;FS=1.357;HRun=0;HaplotypeScore=248.3019;InbreedingCoeff=0.6734;MQ=63.66;MQ0=15;MQRankSum=-2.632;QD=23.07;ReadPosRankSum=1.713;VQSLOD=3.6685;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:26:36.12:0,36,1678	0/0:5,0:6:12.51:0,13,540	0/0:47,0:22:12.91:0,13,229	0/0:44,0:23:24.08:0,24,611	0/0:7,0:11:12.51:0,13,451	1/1:9,3:12:6.02:276,6,0	1/1:15,0:15:5.85:192,6,0	0/0:20,0:19:18.06:0,18,518	0/1:11,1:16:1.93:629,0,2	1/1:13,5:18:20.08:635,20,0	1/1:6,4:10:6.02:106,6,0	1/1:8,7:15:9.03:563,9,0	1/1:8,5:13:2.87:187,3,0	1/1:6,4:10:6.02:324,6,0	0/0:15,0:17:24.55:0,25,1331	1/1:8,6:14:12.04:700,12,0	1/1:19,6:25:5.24:374,5,0	1/1:6,2:8:7.49:406,7,0	1/1:11,4:14:9.02:260,9,0	1/1:12,3:14:9.02:278,9,0	1/1:21,1:22:6.02:149,6,0	1/1:7,2:9:6.02:350,6,0	1/1:13,4:17:8.67:284,9,0	0/1:19,0:19:8.74:170,0,9	0/0:5,0:8:18.06:0,18,959	0/0:11,0:15:24.07:0,24,1103	0/0:8,0:12:12.04:0,12,459	0/0:1,0:2:3.01:0,3,155
chr10	20242284	.	CA	C	22508.56	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=4.192;DP=649;FS=19.229;HRun=1;HaplotypeScore=67.7596;InbreedingCoeff=0.9782;MQ=84.77;MQ0=0;MQRankSum=-9.608;QD=39.01;ReadPosRankSum=3.902;VQSLOD=3.0899;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,37:37:99:1383,99,0	1/1:0,5:5:12.04:168,12,0	0/0:23,0:23:69.19:0,69,1059	0/0:20,0:20:60.16:0,60,917	1/1:0,36:36:99:1467,105,0	1/1:0,19:19:57.19:797,57,0	1/1:0,16:16:48.16:671,48,0	1/1:0,36:36:99:1380,99,0	1/1:0,29:29:81.27:1132,81,0	1/1:0,20:20:57.19:788,57,0	1/1:0,17:17:48.16:664,48,0	1/1:0,23:23:60.20:838,60,0	1/1:0,30:30:84.28:1174,84,0	1/1:0,22:22:60.20:839,60,0	0/0:29,0:29:87.30:0,87,1391	1/1:0,28:28:72.24:1006,72,0	1/1:0,29:29:81.27:1132,81,0	1/1:0,13:13:33.11:461,33,0	1/1:0,25:25:72.24:1006,72,0	1/1:0,22:22:63.21:874,63,0	1/1:0,28:28:78.26:1090,78,0	1/1:0,20:20:57.19:797,57,0	1/1:0,25:25:75.25:1048,75,0	1/1:1,13:14:33.11:461,33,0	1/1:0,26:26:75.25:1048,75,0	1/1:0,32:32:96.31:1320,96,0	1/1:0,20:20:57.19:796,57,0	1/1:0,5:5:12.04:167,12,0
chr10	20242861	.	GA	G	13900.06	PASS	AB=0.880;AC=37;AF=0.661;AN=56;BaseQRankSum=6.923;DP=655;FS=2.195;HRun=4;HaplotypeScore=81.9072;InbreedingCoeff=0.9133;MQ=80.32;MQ0=0;MQRankSum=-2.230;QD=30.55;ReadPosRankSum=1.267;VQSLOD=5.1227;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,147,2024	0/0:14,0:14:36.12:0,36,503	0/0:17,1:17:10.74:0,11,457	0/0:14,0:14:33.08:0,33,412	0/0:18,0:18:51.15:0,51,682	1/1:1,16:17:48.15:576,48,0	1/1:0,20:20:60.18:720,60,0	1/1:4,29:33:87.24:1021,87,0	1/1:1,23:24:66.20:792,66,0	1/1:2,28:30:81.23:959,81,0	1/1:0,7:7:21.06:252,21,0	1/1:1,16:17:42.13:504,42,0	1/1:1,31:32:75.23:896,75,0	1/1:2,24:26:72.22:864,72,0	0/0:36,0:36:99:0,99,1370	1/1:1,21:22:63.19:756,63,0	1/1:1,29:30:81.18:953,81,0	1/1:2,21:23:57.17:684,57,0	1/1:2,24:26:72.20:849,72,0	1/1:1,13:14:39.12:468,39,0	1/1:2,35:37:93.29:1116,93,0	1/1:0,27:27:78.24:936,78,0	1/1:1,17:18:48.15:576,48,0	1/1:2,28:30:78.24:936,78,0	0/0:18,0:18:48.16:0,48,672	0/1:19,3:22:42.45:42,0,685	0/0:18,0:18:54.14:0,54,706	0/0:13,0:13:39.13:0,39,545
chr10	20243620	.	A	AGTGTGTGTGT	3596.04	PASS	AB=1.000;AC=37;AF=0.661;AN=56;BaseQRankSum=3.060;DP=611;FS=21.860;HRun=0;HaplotypeScore=191.5531;InbreedingCoeff=0.6670;MQ=53.98;MQ0=8;MQRankSum=-1.497;QD=8.67;ReadPosRankSum=-5.594;VQSLOD=-0.6139;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:28:22.27:0,22,679	0/0:9,0:9:12.04:0,12,291	0/0:31,0:16:3:0,3,28	0/1:56,0:27:13.26:13,0,102	0/0:23,0:25:1.20:0,1,764	1/1:26,0:25:6.01:75,6,0	1/1:25,0:24:9:92,9,0	1/1:29,0:28:28.18:239,28,0	1/1:9,10:21:9.03:448,9,0	1/1:24,0:25:28.94:382,29,0	1/1:14,0:14:5.99:49,6,0	1/1:22,0:21:12.51:245,13,0	1/1:18,0:17:23.97:282,24,0	1/1:20,0:19:3.94:27,4,0	0/0:31,0:31:59.22:0,59,1714	1/1:23,0:21:24.01:363,24,0	1/1:20,0:20:21.05:488,21,0	1/1:11,0:11:5.95:57,6,0	1/1:14,0:14:9.47:114,9,0	1/1:20,0:20:2.46:73,2,0	1/1:20,0:19:9:132,9,0	1/1:6,0:13:3.01:63,3,0	1/1:15,0:15:18.06:380,18,0	1/1:23,0:21:8.94:71,9,0	0/0:20,0:20:44.17:0,44,1078	0/0:26,0:25:55.24:0,55,1495	0/0:18,0:20:5.29:0,5,716	0/0:6,0:6:12.01:0,12,279
chr10	20243850	.	T	TA	14260.08	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-13.337;DP=550;FS=0.000;HRun=4;HaplotypeScore=50.6765;InbreedingCoeff=0.9949;MQ=88.99;MQ0=0;MQRankSum=-3.387;QD=37.53;ReadPosRankSum=1.439;VQSLOD=4.6758;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:75.16:0,75,819	0/0:15,0:15:45.13:0,45,510	0/0:21,0:21:31.95:0,32,528	0/0:20,0:20:42.11:0,42,476	0/0:12,0:12:33.09:0,33,374	1/1:1,24:25:66.22:903,66,0	1/1:2,23:25:66.22:903,66,0	1/1:1,26:27:78.25:1051,78,0	1/1:0,14:14:42.14:575,42,0	1/1:2,20:22:60.20:814,60,0	1/1:2,17:19:51.09:697,51,0	1/1:3,18:21:51.17:697,51,0	1/1:2,28:30:81.27:1108,81,0	1/1:1,17:18:45.15:615,45,0	0/0:16,0:16:45.13:0,45,510	1/1:0,20:20:57.19:780,57,0	1/1:1,31:32:90.30:1231,90,0	1/1:1,22:23:66.22:903,66,0	1/1:2,20:23:66.19:865,66,0	1/1:0,17:17:51.14:677,51,0	1/1:0,13:13:39.13:534,39,0	1/1:0,14:14:39.09:512,39,0	1/1:2,15:17:45.15:615,45,0	1/1:1,19:20:57.19:780,57,0	0/0:10,0:10:27.08:0,27,306	0/0:19,1:20:13.18:0,13,536	0/0:25,0:25:75.21:0,75,851	0/0:6,0:6:18.05:0,18,204
chr10	20244385	.	A	AT	9495.36	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=2.737;DP=618;FS=0.349;HRun=9;HaplotypeScore=81.8548;InbreedingCoeff=0.9931;MQ=70.92;MQ0=6;MQRankSum=0.237;QD=24.10;ReadPosRankSum=0.730;VQSLOD=5.3621;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:71.91:0,72,616	0/0:9,0:9:14.99:0,15,130	0/0:35,0:24:22.56:0,23,292	0/0:24,0:20:37.58:0,38,288	0/0:21,0:21:50.96:0,51,438	1/1:0,16:16:30.08:332,30,0	1/1:2,15:17:45.12:496,45,0	1/1:7,35:42:88.35:1113,88,0	1/1:3,0:17:28.41:142,28,0	1/1:3,16:19:25.15:484,25,0	1/1:4,12:16:41.28:423,41,0	1/1:5,15:20:36.10:398,36,0	1/1:2,23:25:63.17:697,63,0	1/1:2,12:14:30.08:332,30,0	0/0:19,0:19:53.36:0,53,451	1/1:2,21:23:54.15:597,54,0	1/1:6,17:23:16.06:405,16,0	1/1:4,22:26:51.14:564,51,0	1/1:4,28:32:77.90:796,78,0	1/1:3,28:31:84.19:915,84,0	1/1:6,9:15:27.07:299,27,0	1/1:6,14:20:39.05:408,39,0	1/1:3,26:29:75.20:828,75,0	1/1:0,8:8:24.06:265,24,0	0/0:22,0:22:56.97:0,57,492	0/0:19,1:20:48.93:0,49,453	0/0:33,0:33:86.96:0,87,751	0/0:7,0:7:18:0,18,156
chr10	20245258	.	TAC	T	894.54	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.992;DP=687;FS=8.173;HRun=0;HaplotypeScore=82.6903;InbreedingCoeff=0.9050;MQ=70.78;MQ0=0;MQRankSum=1.513;QD=28.86;ReadPosRankSum=-4.429;VQSLOD=3.6879;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,102,1706	0/0:11,0:11:33.10:0,33,545	0/0:29,0:26:62.38:0,62,903	0/0:23,0:20:35.80:0,36,480	0/0:27,0:27:77.85:0,78,1321	0/0:31,0:31:84.26:0,84,1425	0/0:19,0:19:54.18:0,54,936	1/1:5,26:31:75.21:989,75,0	0/0:22,0:22:60.21:0,60,1038	0/0:25,0:25:72.20:0,72,1168	0/0:21,0:21:63.20:0,63,1052	0/0:26,0:26:78.25:0,78,1337	0/0:24,0:24:72.25:0,72,1240	0/0:28,0:28:78.25:0,78,1333	0/0:41,0:41:99:0,117,2040	0/0:30,0:30:87.30:0,87,1524	0/0:18,0:18:48.15:0,48,814	0/0:20,0:20:54.12:0,54,887	0/0:28,0:28:66.20:0,66,1110	0/0:23,0:23:63.22:0,63,1106	0/0:24,0:24:66.23:0,66,1143	0/0:23,0:23:62.88:0,63,1026	0/0:19,0:19:57.19:0,57,997	0/0:20,0:20:54.19:0,54,958	0/0:31,0:31:87.30:0,87,1499	0/0:23,0:23:62.83:0,63,1100	0/0:26,0:26:72.25:0,72,1256	0/0:2,0:2:6.02:0,6,106
chr10	20246448	.	T	TTTTTTG	1636.91	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=-2.790;DP=719;FS=18.174;HRun=0;HaplotypeScore=194.0724;InbreedingCoeff=0.6890;MQ=63.38;MQ0=10;MQRankSum=0.563;QD=30.89;ReadPosRankSum=-9.235;VQSLOD=0.1709;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,105,2238	0/0:10,0:10:29.98:0,30,457	0/0:21,0:15:19.04:0,19,305	0/1:18,0:17:5.84:6,0,294	0/0:39,0:39:99:0,105,1680	0/0:24,0:24:55.11:0,55,1009	0/0:20,0:20:27.27:0,27,604	1/1:6,29:35:87.10:1731,87,0	0/0:31,0:30:54.47:0,54,1109	0/0:25,0:24:22.58:0,23,652	0/0:21,0:21:38.54:0,39,690	0/0:23,0:23:40.32:0,40,834	0/0:36,0:36:71.88:0,72,1330	0/0:27,0:26:64.03:0,64,1100	0/0:28,0:28:77.21:0,77,1399	0/0:19,0:19:41.09:0,41,737	0/0:35,0:35:51.48:0,51,1130	0/0:30,0:30:34.81:0,35,786	0/0:15,0:13:21.83:0,22,407	0/0:28,0:28:57.35:0,57,1041	0/0:15,0:15:31.38:0,31,640	0/0:21,0:20:34.33:0,34,629	0/0:24,0:24:38.70:0,39,836	0/0:25,0:25:42.32:0,42,851	0/0:29,0:29:75.20:0,75,1392	0/0:35,0:35:94.80:0,95,1572	0/0:34,0:34:87.26:0,87,1586	0/0:6,0:6:18.01:0,18,240
chr10	20246456	.	TTTA	T	2756.60	PASS	AB=1.000;AC=33;AF=0.589;AN=56;BaseQRankSum=16.587;DP=700;FS=2.435;HRun=0;HaplotypeScore=136.8276;InbreedingCoeff=0.9062;MQ=64.56;MQ0=10;MQRankSum=-0.142;QD=6.61;ReadPosRankSum=6.116;VQSLOD=2.4777;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,132,2791	0/0:9,0:9:26.68:0,27,532	0/0:23,0:17:37.06:0,37,564	0/0:16,0:15:25.74:0,26,494	0/0:38,0:38:99:0,114,2301	1/1:21,0:21:20.99:128,21,0	1/1:20,1:21:13.99:136,14,0	0/0:23,0:23:66.07:0,66,747	0/1:26,0:25:15.91:96,0,16	1/1:28,1:28:31.70:274,32,0	1/1:21,1:22:52.30:263,52,0	1/1:24,0:24:30.30:144,30,0	1/1:36,0:36:17.15:162,17,0	1/1:26,1:26:52.54:220,53,0	0/0:28,0:28:81.21:0,81,1653	1/1:22,0:22:48.57:222,49,0	1/1:34,1:35:54.97:240,55,0	1/1:27,0:27:37.87:170,38,0	1/1:18,0:16:6.40:137,6,0	1/1:23,0:23:32.64:160,33,0	1/1:16,1:17:30.46:144,30,0	1/1:23,0:22:45.06:181,45,0	1/1:22,0:22:47.42:181,47,0	1/1:24,0:24:20.38:122,20,0	0/0:27,0:27:81.24:0,81,1659	0/0:34,0:34:99:0,99,1885	0/0:35,0:35:99:0,105,2018	0/0:5,0:5:15.02:0,15,247
chr10	20246457	.	TTA	T	12974.04	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=10.966;DP=697;FS=1.664;HRun=0;HaplotypeScore=88.1001;InbreedingCoeff=0.9903;MQ=65.58;MQ0=9;MQRankSum=-1.365;QD=31.88;ReadPosRankSum=4.858;VQSLOD=6.9921;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,138,2274	0/0:9,0:9:20.96:0,21,405	0/0:23,0:18:27.68:0,28,425	0/0:17,0:16:28.69:0,29,396	0/0:38,0:38:99:0,108,1804	1/1:1,20:21:31.59:727,32,0	1/1:1,19:20:42.12:566,42,0	0/0:23,0:23:53.46:0,53,550	1/1:3,23:25:37.63:699,38,0	1/1:1,27:27:72.08:886,72,0	1/1:1,21:22:59.88:700,60,0	1/1:1,23:24:57.18:794,57,0	1/1:2,32:34:77.37:1052,77,0	1/1:2,25:26:63.18:858,63,0	0/0:28,0:28:80.27:0,80,1304	1/1:6,15:21:63.10:772,63,0	1/1:3,32:35:74.44:991,74,0	1/1:0,26:26:66.22:920,66,0	1/1:2,15:15:22.45:450,22,0	1/1:0,23:23:63.05:830,63,0	1/1:1,16:17:36.10:483,36,0	1/1:0,21:20:54:679,54,0	1/1:2,20:22:65.26:857,65,0	1/1:0,23:23:51.17:711,51,0	0/0:28,0:28:81.20:0,81,1332	0/0:34,0:34:96.14:0,96,1511	0/0:38,0:38:99:0,114,1687	0/0:5,0:5:9.03:0,9,163
chr10	20246458	.	TA	T	5863.80	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=16.006;DP=689;FS=0.961;HRun=2;HaplotypeScore=99.7331;InbreedingCoeff=0.9894;MQ=65.76;MQ0=9;MQRankSum=0.972;QD=14.48;ReadPosRankSum=4.468;VQSLOD=4.5722;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,129,1623	0/0:9,0:9:21.73:0,22,296	0/0:22,0:17:16.47:0,16,273	0/0:13,0:15:30.07:0,30,306	0/0:37,0:37:99:0,102,1293	1/1:21,0:21:52.64:309,53,0	1/1:20,0:20:40.94:240,41,0	0/0:23,0:23:33.84:0,34,395	1/1:24,1:24:49.81:326,50,0	1/1:28,0:27:67.53:424,68,0	1/1:22,0:22:58.59:350,59,0	1/1:23,0:23:55.57:326,56,0	1/1:32,2:34:76.12:469,76,0	1/1:27,0:26:61.39:359,61,0	0/0:27,0:27:75.16:0,75,926	1/1:22,0:22:64.81:427,65,0	1/1:33,2:35:73.23:452,73,0	1/1:26,0:26:64.34:378,64,0	1/1:15,1:14:37.80:247,38,0	1/1:23,0:23:61.45:362,61,0	1/1:17,0:17:35.09:206,35,0	1/1:21,0:20:52.64:310,53,0	1/1:20,2:22:62.75:385,63,0	1/1:23,0:23:49.72:292,50,0	0/0:28,0:28:80.27:0,80,1004	0/0:35,0:35:97.45:0,97,1150	0/0:36,0:36:99:0,103,1206	0/0:3,0:3:9.03:0,9,120
chr10	20246698	.	AGCTCAGTCT	A	17753.35	PASS	AB=0.967;AC=33;AF=0.589;AN=56;BaseQRankSum=17.399;DP=581;FS=11.035;HRun=0;HaplotypeScore=190.3441;InbreedingCoeff=0.9294;MQ=73.52;MQ0=0;MQRankSum=-17.569;QD=56.72;ReadPosRankSum=3.030;VQSLOD=3.6492;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,151,6935	0/0:11,0:11:33.11:0,33,1605	0/0:17,0:17:19.59:0,20,1765	0/0:16,0:16:35.93:0,36,1005	0/0:31,0:31:93.32:0,93,4452	1/1:4,15:19:36.12:1114,36,0	1/1:4,12:16:18.06:558,18,0	0/0:30,0:29:84.29:0,84,3509	0/0:27,0:27:78.27:0,78,3782	1/1:1,11:12:33.11:922,33,0	1/1:4,21:25:57.19:1656,57,0	1/1:1,16:17:36.12:1113,36,0	1/1:2,16:18:48.16:1434,48,0	1/1:2,14:16:36.12:1051,36,0	0/0:26,0:26:78.27:0,78,3725	1/1:1,20:21:51.18:1581,51,0	1/1:2,12:14:21.07:649,21,0	1/1:2,10:12:24.08:745,24,0	1/1:3,14:17:42.12:1167,42,0	1/1:3,20:23:51.18:1582,51,0	1/1:2,8:10:21.07:651,21,0	1/1:2,23:25:60.21:1861,60,0	1/1:3,18:21:45.15:1384,45,0	1/1:5,13:18:8.70:279,9,0	0/0:19,0:19:57.20:0,57,2766	0/1:28,1:29:5.78:6,0,3933	0/0:29,0:29:84.27:0,84,3876	0/0:8,0:8:24.08:0,24,1081
chr10	20251173	.	T	TA	6972.26	PASS	AB=0.620;AC=44;AF=0.786;AN=56;BaseQRankSum=-4.817;DP=684;FS=0.000;HRun=13;HaplotypeScore=102.8505;InbreedingCoeff=0.7617;MQ=79.10;MQ0=1;MQRankSum=-2.400;QD=12.43;ReadPosRankSum=1.443;VQSLOD=4.6235;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:14,2:50:74.19:401,74,0	1/1:2,1:11:17.04:86,17,0	0/0:33,0:31:15.86:0,16,176	0/0:17,0:16:12.78:0,13,75	1/1:4,2:28:50.26:299,50,0	1/1:2,10:13:29.87:265,30,0	1/1:6,7:14:11.17:130,11,0	0/0:27,0:29:37.67:0,38,252	0/0:2,0:14:22.40:0,22,66	1/1:14,22:36:48.47:586,48,0	1/1:6,16:23:38.90:337,39,0	1/1:7,15:22:8.85:198,9,0	0/1:9,13:22:14.16:158,0,14	1/1:9,15:24:14.90:259,15,0	0/0:24,1:26:27.45:0,27,317	1/1:5,12:17:30.03:275,30,0	1/1:5,20:27:29.47:434,29,0	1/1:5,18:23:27.94:398,28,0	1/1:8,20:29:44.68:437,45,0	1/1:9,23:32:9.18:474,9,0	1/1:10,11:21:6.29:187,6,0	1/1:3,16:21:41.77:353,42,0	0/1:11,18:30:2.89:399,0,3	1/1:9,20:29:51.05:474,51,0	1/1:5,2:18:25.73:143,26,0	1/1:10,3:28:46.30:253,46,0	1/1:9,4:33:55.99:312,56,0	1/1:2,1:10:20.05:114,20,0
chr10	20251777	.	TA	T	12575.69	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-0.735;DP=618;FS=18.346;HRun=9;HaplotypeScore=67.1540;InbreedingCoeff=0.9750;MQ=64.72;MQ0=5;MQRankSum=-1.055;QD=21.91;ReadPosRankSum=4.006;VQSLOD=3.7695;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,40:40:98.85:881,99,0	1/1:0,13:13:39.02:357,39,0	0/0:14,0:8:23.95:0,24,223	0/0:11,0:11:17.62:0,18,194	1/1:5,35:40:98.97:895,99,0	1/1:1,18:19:50.93:455,51,0	1/1:2,17:19:45.02:411,45,0	1/1:3,21:24:62.72:546,63,0	1/1:1,19:20:47.86:430,48,0	1/1:10,23:33:68.85:603,69,0	1/1:1,15:16:45.02:411,45,0	1/1:2,21:23:32.50:469,32,0	1/1:1,24:25:65.96:603,66,0	1/1:3,23:26:60.03:549,60,0	0/0:19,0:19:51.11:0,51,572	1/1:4,14:18:39.02:357,39,0	1/1:2,23:25:54.03:494,54,0	1/1:0,17:17:42.02:384,42,0	1/1:1,19:19:54.02:490,54,0	1/1:3,27:30:74.89:679,75,0	1/1:2,13:14:30.02:274,30,0	1/1:3,10:13:30.01:274,30,0	1/1:1,20:21:54.03:494,54,0	1/1:5,19:24:50.25:446,50,0	1/1:5,19:24:51.03:467,51,0	1/1:3,28:31:84:756,84,0	1/1:4,30:34:84.05:769,84,0	1/1:0,3:3:9:82,9,0
chr10	20252435	.	A	AC	4675.02	PASS	AB=0.695;AC=30;AF=0.536;AN=56;BaseQRankSum=-8.924;DP=464;FS=9.731;HRun=8;HaplotypeScore=50.6748;InbreedingCoeff=0.7361;MQ=80.24;MQ0=1;MQRankSum=-2.472;QD=17.38;ReadPosRankSum=1.028;VQSLOD=3.8400;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:57.01:0,57,519	0/0:5,0:5:6:0,6,55	0/0:17,0:17:29.50:0,29,286	0/1:20,0:19:5.27:5,0,161	0/0:14,0:14:36.01:0,36,328	1/1:3,12:15:18.05:208,18,0	0/1:10,23:33:28.35:447,0,28	0/0:20,0:20:47.99:0,48,432	0/0:6,0:20:30.55:0,31,89	1/1:4,9:13:24.05:265,24,0	1/1:2,9:11:15.04:173,15,0	1/1:0,12:12:18.05:208,18,0	1/1:4,18:22:20.75:488,21,0	1/1:3,10:13:24.07:272,24,0	0/0:21,0:21:48.02:0,48,439	1/1:5,16:21:39.11:447,39,0	1/1:6,19:25:33.02:473,33,0	1/1:2,8:10:21.06:242,21,0	1/1:3,11:14:30.27:348,30,0	0/1:3,10:13:0.37:250,0,0	1/1:4,14:17:25.17:339,25,0	1/1:4,9:13:14.88:172,15,0	0/1:2,3:5:18.40:61,0,18	1/1:1,10:11:24.07:277,24,0	0/0:23,0:23:53.03:0,53,467	0/0:16,0:16:30.01:0,30,274	0/0:22,0:22:51.01:0,51,464	0/0:10,0:10:11.83:0,12,110
chr10	20253443	.	GT	G	743.67	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.847;DP=620;FS=1.523;HRun=6;HaplotypeScore=60.9342;InbreedingCoeff=0.9293;MQ=60.97;MQ0=4;MQRankSum=0.635;QD=23.99;ReadPosRankSum=-3.785;VQSLOD=1.6757;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:78.11:0,78,1012	0/0:4,0:4:9.03:0,9,118	0/0:26,0:21:40.02:0,40,482	0/0:19,0:13:24.06:0,24,287	0/0:30,0:30:87.28:0,87,1143	0/0:24,0:24:66.20:0,66,852	0/0:14,0:14:39.11:0,39,494	1/1:3,28:31:80.73:839,81,0	0/0:26,0:26:78.25:0,78,1015	0/0:25,0:25:66.21:0,66,866	0/0:13,0:13:39.11:0,39,497	0/0:19,0:19:51.16:0,51,657	0/0:16,0:16:48.15:0,48,617	0/0:16,0:16:45.15:0,45,591	0/0:20,0:20:51.16:0,51,658	0/0:21,0:21:60.19:0,60,785	0/0:35,0:35:99:0,99,1253	0/0:16,0:16:37.67:0,38,474	0/0:26,0:25:72.23:0,72,934	0/0:24,0:24:69.22:0,69,906	0/0:22,0:22:60.11:0,60,754	0/0:26,0:25:72.23:0,72,946	0/0:20,0:20:60.19:0,60,786	0/0:30,0:29:90.29:0,90,1182	0/0:23,0:23:69.18:0,69,872	0/0:25,0:25:72.22:0,72,925	0/0:29,0:29:72.23:0,72,946	0/0:7,0:7:15.05:0,15,197
chr10	20253637	.	AACACACAC	A	809.94	PASS	AB=0.673;AC=12;AF=0.231;AN=52;BaseQRankSum=6.713;DP=564;FS=7.487;HRun=0;HaplotypeScore=136.5145;InbreedingCoeff=0.6137;MQ=69.73;MQ0=14;MQRankSum=-0.801;QD=5.66;ReadPosRankSum=-0.180;VQSLOD=2.1054;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:24,11:35:3.01:75,3,0	1/1:7,3:11:8.51:110,9,0	0/0:34,0:22:2.22:0,2,7	0/0:28,0:20:2.22:0,2,7	./.	0/0:16,0:17:24.07:0,24,767	0/0:31,0:36:30:0,30,1092	0/0:17,0:16:12.04:0,12,356	0/1:10,0:19:10.53:39,0,11	0/0:21,0:20:24.08:0,24,767	0/0:12,0:12:12.04:0,12,369	0/0:15,0:15:15.51:0,16,389	0/0:15,0:15:15.05:0,15,413	0/0:14,0:14:15.05:0,15,571	0/1:9,0:18:31.56:46,0,32	0/0:20,0:20:33.11:0,33,1180	0/0:26,0:25:43.39:0,43,1430	0/0:11,0:14:18.06:0,18,586	0/0:23,0:24:21.53:0,22,595	0/0:7,0:7:9.03:0,9,300	0/0:30,0:29:39.13:0,39,1368	0/0:14,0:18:21.07:0,21,606	0/0:17,0:17:18.06:0,18,556	0/0:30,0:35:42.14:0,42,1466	1/1:4,7:11:6.02:131,6,0	1/1:13,12:25:29.01:341,29,0	1/1:16,7:22:8.92:224,9,0	./.
chr10	20259199	.	TA	T	7983.87	PASS	AB=0.938;AC=36;AF=0.643;AN=56;BaseQRankSum=7.607;DP=599;FS=0.712;HRun=10;HaplotypeScore=66.6123;InbreedingCoeff=0.8175;MQ=66.70;MQ0=0;MQRankSum=-2.341;QD=18.70;ReadPosRankSum=2.906;VQSLOD=5.7439;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:51.12:0,51,554	0/0:9,0:9:26.94:0,27,280	0/0:10,0:10:20.11:0,20,205	0/1:10,0:10:14.96:15,0,105	0/0:30,2:32:52.86:0,53,751	1/1:2,26:28:65.98:573,66,0	1/1:1,10:11:23.99:208,24,0	0/0:6,0:25:51.86:0,52,285	1/1:2,17:19:47.99:416,48,0	1/1:2,26:28:80.95:694,81,0	1/1:0,27:27:68.84:581,69,0	1/1:0,22:22:59.99:521,60,0	1/1:2,18:20:41.99:364,42,0	1/1:3,23:26:53.99:469,54,0	0/0:19,0:19:45.11:0,45,490	1/1:3,15:18:44.98:390,45,0	1/1:1,23:24:59.99:521,60,0	1/1:1,22:23:56.98:495,57,0	1/1:1,16:17:44.89:371,45,0	1/1:7,28:35:51.85:617,52,0	1/1:4,17:21:47.16:384,47,0	1/1:4,23:27:51.24:532,51,0	1/1:6,25:32:70.59:597,71,0	1/1:2,9:11:23.99:208,24,0	0/1:24,4:28:25.96:26,0,628	0/0:27,2:28:26.18:0,26,693	0/0:24,1:25:21.07:0,21,616	0/0:2,0:2:3.01:0,3,33
chr10	20259365	.	GGTGTGTGTGT	G	4680.64	PASS	AB=0.745;AC=27;AF=0.482;AN=56;BaseQRankSum=4.411;DP=696;FS=96.681;HRun=0;HaplotypeScore=204.7049;InbreedingCoeff=0.4218;MQ=46.18;MQ0=9;MQRankSum=-7.316;QD=12.35;ReadPosRankSum=4.449;VQSLOD=0.0596;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:29:48.14:0,48,1857	0/0:11,0:11:5.95:0,6,264	0/0:25,0:10:8.98:0,9,130	0/0:34,0:12:20.75:0,21,334	0/0:15,0:24:17.96:0,18,477	1/1:9,8:18:27.08:520,27,0	0/1:8,11:20:5.74:187,0,6	0/0:40,0:41:39.11:0,39,741	1/1:13,4:17:18.04:352,18,0	0/1:26,1:30:99:260,0,570	0/1:11,8:19:33.55:98,0,34	1/1:12,11:22:21.04:526,21,0	0/1:15,5:19:10.48:173,0,10	1/1:10,14:25:3.98:313,4,0	0/0:42,0:45:54.19:0,54,2240	0/1:14,9:23:57.58:254,0,58	1/1:11,7:19:6.02:159,6,0	0/1:10,5:15:5.80:282,0,6	1/1:17,15:33:37.88:769,38,0	1/1:17,9:28:3.04:108,3,0	0/1:13,7:20:81.19:81,0,133	1/1:18,10:27:8.86:165,9,0	1/1:5,10:17:8.99:180,9,0	1/1:9,10:21:12.04:252,12,0	0/0:26,0:27:33.11:0,33,1331	0/0:39,0:38:26.49:0,26,2223	0/0:23,0:26:54.18:0,54,1888	0/0:8,0:7:9.03:0,9,324
chr10	20259469	.	ATG	A	692.36	PASS	AB=0.952;AC=3;AF=0.054;AN=56;BaseQRankSum=10.764;DP=1337;FS=6.138;HRun=0;HaplotypeScore=549.2043;InbreedingCoeff=0.7475;MQ=47.04;MQ0=13;MQRankSum=-8.449;QD=9.75;ReadPosRankSum=-3.811;VQSLOD=2.8823;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:38:87.05:0,87,1324	0/0:19,0:19:32.76:0,33,429	0/0:57,0:30:67.44:0,67,922	0/0:61,0:33:45.62:0,46,635	0/0:58,0:58:69.51:0,70,1118	0/0:46,0:45:70.67:0,71,1435	0/0:28,0:28:59.86:0,60,972	0/0:47,0:47:99:0,102,1658	1/1:9,22:30:61.04:787,61,0	0/0:83,0:83:36.70:0,37,1972	0/0:52,0:52:37.18:0,37,881	0/0:52,0:52:99:0,105,1871	0/0:44,0:44:93.74:0,94,1640	0/1:38,2:40:2.36:2,0,994	0/0:55,0:55:99:0,116,2123	0/0:54,0:53:99:0,123,1901	0/0:26,0:26:72.24:0,72,1173	0/0:24,0:24:60.21:0,60,1004	0/0:30,0:29:37.09:0,37,743	0/0:83,0:82:99:0,122,1774	0/0:57,0:57:99:0,141,2272	0/0:65,0:65:49.08:0,49,1259	0/0:65,0:65:81.19:0,81,1518	0/0:31,0:31:51.17:0,51,779	0/0:69,0:69:68.92:0,69,1102	0/0:58,0:57:99:0,119,1991	0/0:41,0:41:98.75:0,99,1467	0/0:21,0:21:40.18:0,40,687
chr10	20260338	.	GCACTGCAAGCTCAGGAA	G	4560.66	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=9.382;DP=824;FS=12.941;HRun=0;HaplotypeScore=398.7342;InbreedingCoeff=0.9636;MQ=68.65;MQ0=0;MQRankSum=-4.411;QD=26.67;ReadPosRankSum=1.790;VQSLOD=1.7236;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:13,33:46:8.82:190,9,0	1/1:6,0:6:12.04:321,12,0	0/0:33,0:28:27.06:0,27,465	0/0:27,0:27:30.57:0,31,670	1/1:9,13:22:14.66:249,15,0	0/0:25,0:25:57.18:0,57,3140	0/0:31,0:31:54.19:0,54,2585	0/0:24,0:24:33.04:0,33,650	0/0:37,0:37:84.29:0,84,5576	0/0:34,0:34:78.25:0,78,4427	0/0:17,0:17:39.13:0,39,2339	0/0:50,0:50:99:0,117,6678	0/0:25,0:25:60.19:0,60,2725	0/0:31,0:31:66.23:0,66,4225	0/0:45,0:45:96.33:0,96,5629	0/0:40,0:40:87.29:0,87,5053	0/0:24,0:24:54.16:0,54,2545	0/0:33,0:33:78.27:0,78,4204	0/0:21,0:19:24.06:0,24,1133	0/0:18,0:18:48.16:0,48,2380	0/0:73,0:73:99:0,175,8959	0/0:22,0:22:45.14:0,45,2623	0/0:15,0:15:42.13:0,42,2219	0/0:28,0:28:54.19:0,54,3150	1/1:4,15:19:9.03:406,9,0	1/1:12,24:36:69.11:1874,69,0	1/1:12,21:33:17.21:825,17,0	1/1:1,8:9:15.05:696,15,0
chr10	20260700	.	TG	T	2486.30	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=0.354;DP=460;FS=4.062;HRun=11;HaplotypeScore=95.0809;InbreedingCoeff=0.9177;MQ=75.10;MQ0=1;MQRankSum=-3.902;QD=6.11;ReadPosRankSum=4.031;VQSLOD=2.1038;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,15:22:34.99:276,35,0	1/1:2,6:8:14.94:118,15,0	0/0:19,0:15:10.59:0,11,95	0/0:16,0:13:15.86:0,16,128	1/1:3,10:13:23.95:197,24,0	1/1:20,0:20:33.06:95,33,0	1/1:19,0:19:24.44:71,24,0	1/1:17,0:17:9.60:26,10,0	1/1:3,0:11:16.29:47,16,0	1/1:22,0:22:22.29:80,22,0	1/1:14,0:14:24.44:71,24,0	1/1:15,0:15:24.44:71,24,0	1/1:11,0:11:14.75:48,15,0	1/1:18,0:18:31.02:90,31,0	0/0:17,0:18:32.59:0,33,351	1/1:12,0:12:18.11:53,18,0	1/1:27,0:27:38.70:112,39,0	1/1:25,0:25:24.43:71,24,0	1/1:19,0:19:16.64:46,17,0	1/1:16,0:16:28.03:81,28,0	1/1:12,0:12:18.33:53,18,0	1/1:19,0:19:22.41:65,22,0	1/1:16,0:16:16.27:47,16,0	1/1:22,0:22:36.66:107,37,0	1/1:5,8:14:31.99:252,32,0	1/1:3,5:9:14.02:104,14,0	1/1:4,15:19:38.95:320,39,0	1/1:0,6:7:17.02:129,17,0
chr10	20260709	.	GGGC	G	10481.46	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-4.115;DP=465;FS=0.388;HRun=0;HaplotypeScore=84.3074;InbreedingCoeff=0.9979;MQ=73.56;MQ0=1;MQRankSum=-3.673;QD=35.06;ReadPosRankSum=4.180;VQSLOD=5.2082;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:59.69:0,60,611	0/0:9,0:9:23.82:0,24,213	0/0:19,0:15:27.43:0,27,389	0/0:13,0:10:24.01:0,24,271	0/0:13,0:13:29.96:0,30,282	1/1:0,24:24:57.11:853,57,0	1/1:0,24:24:36.12:584,36,0	1/1:15,2:17:41.28:342,41,0	0/0:10,0:10:26.78:0,27,144	1/1:0,20:20:59.74:863,60,0	1/1:3,10:13:39.02:570,39,0	1/1:0,15:15:39.08:603,39,0	1/1:0,11:11:30.10:470,30,0	1/1:3,15:18:54:781,54,0	0/0:17,0:17:45.06:0,45,863	1/1:0,12:12:27.09:438,27,0	1/1:0,25:25:57.19:921,57,0	1/1:1,24:25:42.07:627,42,0	1/1:0,10:10:30.08:451,30,0	1/1:0,18:18:53.95:752,54,0	1/1:0,13:13:27.56:439,28,0	1/1:1,17:18:36.06:527,36,0	1/1:0,15:15:24.08:385,24,0	1/1:0,21:21:54.18:877,54,0	0/0:14,0:14:41.60:0,42,389	0/0:15,0:15:39.09:0,39,327	0/0:20,0:20:54.13:0,54,595	0/0:9,0:9:23.54:0,24,223
chr10	20261894	.	CACACACATATATATATATATAT	C	781.24	PASS	AB=0.790;AC=4;AF=0.105;AN=38;BaseQRankSum=4.504;DP=116;FS=20.071;HRun=0;HaplotypeScore=85.5565;InbreedingCoeff=0.0776;MQ=53.41;MQ0=5;MQRankSum=2.910;QD=16.28;ReadPosRankSum=1.433;VQSLOD=0.2128;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	./.	1/1:1,0:1:1.25:3,1,0	./.	./.	0/0:4,0:4:2.82:0,3,45	0/0:3,0:3:6.02:0,6,105	0/1:11,29:40:99:852,0,419	./.	0/0:4,0:4:10.90:0,11,121	0/0:6,0:5:14.08:0,14,211	0/0:2,0:2:3.01:0,3,52	0/0:2,0:2:3.01:0,3,71	0/0:1,0:1:2.94:0,3,18	0/0:6,0:6:18.06:0,18,1014	0/0:2,0:2:6.02:0,6,123	0/0:11,0:9:12.04:0,12,224	0/0:10,0:9:20.60:0,21,823	0/0:5,0:4:7.60:0,8,68	./.	0/0:2,0:1:3.01:0,3,50	./.	0/0:1,0:1:3.01:0,3,47	0/0:2,0:1:3.01:0,3,50	./.	./.	0/0:1,0:1:2.94:0,3,18	0/1:7,0:6:0:0,0,0
chr10	20261916	.	T	TACAC	3731.65	PASS	AB=1.000;AC=31;AF=0.596;AN=52;BaseQRankSum=0.031;DP=192;FS=14.102;HRun=0;HaplotypeScore=41.9222;InbreedingCoeff=0.6582;MQ=72.49;MQ0=3;MQRankSum=-0.875;QD=28.49;ReadPosRankSum=4.783;VQSLOD=1.8906;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:4:12.02:0,12,150	0/0:1,0:1:2.98:0,3,22	0/0:8,0:8:18.63:0,19,228	0/0:2,0:2:5.99:0,6,66	0/0:6,0:6:15.03:0,15,211	1/1:1,5:9:6.02:152,6,0	1/1:1,3:6:6.02:152,6,0	1/1:39,0:39:84.96:1107,85,0	0/1:1,0:1:0:0,0,0	1/1:1,6:9:24.06:452,24,0	1/1:1,7:7:12.04:305,12,0	1/1:1,1:4:3.01:76,3,0	1/1:2,4:6:2.71:75,3,0	./.	0/0:8,0:8:15.04:0,15,218	1/1:0,3:3:6.02:152,6,0	1/1:2,9:9:12.04:305,12,0	1/1:2,10:12:18.06:430,18,0	1/1:2,3:5:9.03:200,9,0	./.	1/1:1,3:4:3.01:76,3,0	1/1:2,0:2:6.02:96,6,0	1/1:0,3:3:3.01:76,3,0	1/1:0,7:6:3.01:76,3,0	0/0:5,0:5:15.02:0,15,189	0/0:4,0:4:6.01:0,6,76	0/0:4,0:4:12.04:0,12,178	0/0:7,0:7:3.01:0,3,46
chr10	20262510	.	G	GGT	269.78	PASS	AB=0.942;AC=14;AF=0.368;AN=38;BaseQRankSum=-1.306;DP=547;FS=1.461;HRun=0;HaplotypeScore=96.1983;InbreedingCoeff=0.3371;MQ=69.04;MQ0=11;MQRankSum=-0.082;QD=1.43;ReadPosRankSum=-0.762;VQSLOD=1.7526;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:5.04:0,5,38	0/1:11,0:11:0.04:0,0,0	./.	./.	0/0:10,0:10:2.80:0,3,13	./.	0/0:29,0:28:2.84:0,3,14	./.	0/0:8,0:11:2.84:0,3,14	./.	./.	0/1:16,5:23:25.63:38,0,26	0/1:10,0:9:0:0,0,0	1/1:15,1:16:3.01:43,3,0	0/0:22,0:25:5.74:0,6,45	0/0:18,0:20:17.71:0,18,154	0/0:34,0:32:5.82:0,6,71	0/0:18,0:18:11.26:0,11,86	./.	0/0:12,0:11:5.04:0,5,34	0/1:51,0:48:18.37:18,0,20	1/1:8,0:8:6.02:79,6,0	1/1:14,0:14:6:63,6,0	1/1:28,7:36:9.50:132,10,0	./.	1/1:20,0:19:2.34:19,2,0	0/0:14,0:15:5.75:0,6,43	./.
chr10	20262630	.	TCTCG	T	3942.33	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=2.372;DP=571;FS=13.216;HRun=0;HaplotypeScore=131.6940;InbreedingCoeff=0.0309;MQ=73.73;MQ0=14;MQRankSum=-0.564;QD=12.02;ReadPosRankSum=1.624;VQSLOD=2.4518;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:45.04:0,45,935	0/0:11,0:11:24.08:0,24,548	0/0:39,0:22:33.68:0,34,1100	0/0:63,0:28:66.98:0,67,1406	0/0:13,0:12:21.07:0,21,434	0/1:23,0:23:63.36:240,0,63	0/1:20,0:20:25.32:219,0,25	1/1:2,21:21:60.16:1143,60,0	0/1:23,0:23:99:114,0,146	0/1:13,0:13:99:110,0,111	0/1:13,0:13:6.03:111,0,6	1/1:22,0:22:41.65:299,42,0	0/1:16,0:14:83.46:153,0,83	1/1:18,0:16:14.71:97,15,0	0/0:27,0:27:68.71:0,69,1678	0/1:20,0:20:46.11:244,0,46	0/1:14,0:14:62.66:63,0,157	0/1:11,0:11:44.88:133,0,45	0/1:16,0:16:99:143,0,104	0/1:16,0:16:5.98:203,0,6	0/1:24,0:24:99:179,0,190	1/1:16,0:16:32.75:234,33,0	1/1:11,0:11:0.47:1,0,0	0/1:29,0:28:35.04:259,0,35	0/0:16,0:15:27.09:0,27,646	0/0:19,0:19:57.19:0,57,1300	0/0:16,0:16:10.78:0,11,496	0/0:10,0:10:27.09:0,27,581
chr10	20262633	.	CGA	C	8846.09	PASS	AB=0.833;AC=37;AF=0.661;AN=56;BaseQRankSum=-1.610;DP=579;FS=4.597;HRun=0;HaplotypeScore=101.1585;InbreedingCoeff=0.7875;MQ=72.29;MQ0=15;MQRankSum=-2.927;QD=24.50;ReadPosRankSum=-1.323;VQSLOD=5.0219;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:39.06:0,39,564	0/0:12,0:12:24.08:0,24,359	0/0:38,1:21:5.69:0,6,714	0/0:63,0:28:67.93:0,68,990	0/0:13,0:12:12.75:0,13,253	1/1:22,0:22:48.15:694,48,0	1/1:19,0:19:38.34:543,38,0	1/1:23,0:21:57.16:699,57,0	1/1:24,0:24:33.07:390,33,0	1/1:13,0:13:29.58:441,30,0	1/1:13,0:13:21.05:294,21,0	1/1:25,0:25:40.23:644,40,0	1/1:15,1:14:28.92:390,29,0	1/1:18,1:17:18.06:255,18,0	0/0:26,0:26:50.51:0,51,858	1/1:21,0:21:47.61:689,48,0	1/1:13,1:14:25.26:261,25,0	1/1:11,2:12:30.47:382,30,0	1/1:15,0:15:27.16:474,27,0	1/1:16,0:16:38.60:543,39,0	1/1:21,0:21:43.42:557,43,0	1/1:16,1:17:36.12:550,36,0	0/1:0,10:10:0.26:0,0,0	1/1:30,0:29:59.28:868,59,0	0/0:18,0:17:27.09:0,27,423	0/0:19,0:19:30.28:0,30,737	0/1:16,0:16:52.59:53,0,221	0/1:14,0:14:99:116,0,252
chr10	20262635	.	A	ATC	1225.39	PASS	AB=1.000;AC=44;AF=0.880;AN=50;BaseQRankSum=-0.508;DP=603;FS=3.014;HRun=0;HaplotypeScore=142.2501;InbreedingCoeff=0.1866;MQ=68.50;MQ0=17;MQRankSum=0.949;QD=2.38;ReadPosRankSum=-1.479;VQSLOD=2.2491;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:30:8.79:35,0,9	0/1:12,0:12:0:0,0,0	./.	0/1:61,0:26:0:0,0,0	1/1:16,0:15:3:25,3,0	1/1:24,0:24:0.81:2,1,0	1/1:20,0:20:1.55:4,2,0	1/1:26,0:24:1.72:4,2,0	1/1:25,0:25:14.81:130,15,0	1/1:16,0:16:7.73:40,8,0	1/1:15,0:15:2.98:22,3,0	0/1:26,0:26:0:0,0,0	1/1:16,0:14:2.71:20,3,0	1/1:20,0:18:3.01:42,3,0	1/1:15,16:31:0.27:416,0,0	0/0:22,0:22:0.26:0,0,1	1/1:12,0:12:8.97:84,9,0	1/1:14,0:13:6.96:84,7,0	1/1:15,0:15:1.83:3,2,0	1/1:16,0:16:3:26,3,0	1/1:18,0:18:8.78:53,9,0	1/1:18,0:18:3.01:42,3,0	./.	1/1:32,0:31:5.87:29,6,0	./.	1/1:20,0:20:6.52:37,7,0	1/1:16,0:16:6.02:79,6,0	1/1:15,0:14:14.45:129,14,0
chr10	20264122	.	C	CAGACAG	16942.04	PASS	AC=48;AF=0.889;AN=54;BaseQRankSum=-7.359;DP=779;FS=0.000;HRun=0;HaplotypeScore=227.0274;InbreedingCoeff=0.6621;MQ=62.92;MQ0=5;MQRankSum=-10.687;QD=29.06;ReadPosRankSum=3.092;VQSLOD=4.4001;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,32:45:3.48:102,3,0	1/1:2,9:11:9.03:234,9,0	0/0:60,0:42:68.45:0,68,1396	0/0:83,0:45:18.86:0,19,961	1/1:1,19:22:2.59:17,3,0	1/1:2,13:17:8.96:225,9,0	1/1:6,25:32:12.98:414,13,0	1/1:10,14:24:39.12:1105,39,0	1/1:2,13:16:18.06:615,18,0	1/1:9,22:32:66.23:2187,66,0	1/1:5,16:21:0.47:1,0,0	1/1:8,31:40:34.50:1104,35,0	1/1:7,18:28:39.13:1329,39,0	1/1:2,23:27:18.06:610,18,0	0/0:27,0:27:63.19:0,63,1339	1/1:7,30:39:39.02:1333,39,0	1/1:2,15:18:15.29:515,15,0	1/1:7,11:19:30.10:1031,30,0	1/1:7,10:20:42.13:1178,42,0	1/1:5,18:23:21:584,21,0	1/1:13,13:27:2.77:76,3,0	1/1:3,21:24:3.01:103,3,0	1/1:1,11:13:5.94:121,6,0	1/1:8,16:25:3.29:103,3,0	./.	1/1:4,21:26:63.21:1894,63,0	1/1:3,18:23:31.04:1030,31,0	1/1:0,11:11:30.10:1031,30,0
chr10	20265370	.	T	TTG	7821.07	PASS	AB=0.868;AC=29;AF=0.518;AN=56;BaseQRankSum=3.162;DP=738;FS=12.127;HRun=0;HaplotypeScore=197.6714;InbreedingCoeff=0.3822;MQ=69.04;MQ0=11;MQRankSum=-2.172;QD=16.06;ReadPosRankSum=0.902;VQSLOD=3.7077;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:32.93:0,33,370	0/0:12,0:12:15.04:0,15,178	0/0:62,0:35:28.53:0,29,418	0/0:63,0:39:58.08:0,58,628	0/0:13,0:11:21.07:0,21,265	0/1:23,4:26:35.23:139,0,35	1/1:17,14:30:42.14:645,42,0	1/1:22,18:39:4.63:786,5,0	0/1:23,1:24:2.96:542,0,3	0/1:29,7:35:15.38:660,0,15	1/1:10,7:18:18:286,18,0	0/1:24,6:29:9.79:576,0,10	0/1:17,3:20:5.67:216,0,6	1/1:25,7:30:44.89:661,45,0	0/0:24,0:24:44.95:0,45,506	1/1:22,6:26:39.12:571,39,0	1/1:29,7:36:9.58:661,10,0	1/1:19,3:22:19:389,19,0	0/1:15,0:12:24.15:132,0,24	1/1:13,3:16:21.07:325,21,0	1/1:33,3:36:43.66:613,44,0	0/1:9,8:17:15.13:259,0,15	1/1:7,3:11:9.03:144,9,0	0/1:19,9:27:18.41:212,0,18	0/0:26,0:23:27.79:0,28,446	0/1:19,0:19:4.67:5,0,276	0/0:15,0:15:21.06:0,21,253	0/0:6,0:6:12.02:0,12,133
chr10	20265388	.	GCA	G	3084.30	PASS	AB=0.899;AC=34;AF=0.607;AN=56;BaseQRankSum=4.656;DP=723;FS=17.212;HRun=0;HaplotypeScore=206.9333;InbreedingCoeff=-0.3483;MQ=51.83;MQ0=36;MQRankSum=-2.079;QD=4.90;ReadPosRankSum=2.468;VQSLOD=1.9170;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:29,1:27:91.15:91,0,340	0/1:9,2:10:28.62:29,0,131	0/0:42,0:17:36.53:0,37,714	0/0:50,0:27:52.55:0,53,913	0/1:22,1:21:78.81:117,0,79	0/1:26,2:27:13.49:190,0,13	1/1:27,6:31:0.93:48,1,0	0/1:33,1:27:37.83:38,0,97	1/1:10,14:22:10.18:406,10,0	0/1:29,7:31:93.02:403,0,93	0/1:19,4:22:41.57:42,0,45	0/1:22,5:25:8.60:108,0,9	0/1:16,3:16:11.23:76,0,11	1/1:29,7:32:6.37:204,6,0	0/1:26,1:26:28.49:28,0,862	1/1:21,7:26:17.29:155,17,0	0/1:26,4:29:15.16:235,0,15	1/1:23,2:24:33.67:331,34,0	0/1:12,1:10:16.83:17,0,59	1/1:12,3:15:7.17:127,7,0	1/1:29,8:32:16.68:271,17,0	0/1:16,1:17:41.15:46,0,41	1/1:12,1:13:8:55,8,0	0/1:25,2:26:40.66:56,0,41	0/1:28,4:29:1.14:1,0,256	0/1:17,0:14:24.96:25,0,83	0/1:13,2:14:72.27:96,0,72	0/1:5,3:8:54.11:54,0,66
chr10	20265389	.	CAT	C	1875.09	PASS	AB=0.982;AC=29;AF=0.518;AN=56;BaseQRankSum=3.252;DP=714;FS=0.792;HRun=0;HaplotypeScore=209.4316;InbreedingCoeff=-0.4998;MQ=50.78;MQ0=37;MQRankSum=-3.274;QD=3.17;ReadPosRankSum=6.368;VQSLOD=2.1525;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:31,0:27:51.91:52,0,129	0/1:11,0:10:31.66:32,0,48	0/0:40,0:15:19.54:0,20,417	0/0:48,0:25:44.95:0,45,563	1/1:23,0:21:4.49:119,4,0	0/1:26,1:26:55.24:100,0,55	0/0:33,0:31:10.47:0,10,174	0/1:33,0:26:75.33:75,0,269	0/1:24,0:22:60.55:176,0,61	0/1:33,3:31:99:316,0,126	0/1:22,1:22:39.97:40,0,107	0/1:26,1:25:35.31:35,0,151	0/1:18,0:15:16.02:35,0,16	0/1:35,1:33:91.60:96,0,92	0/1:27,0:26:4.63:5,0,864	0/1:25,0:24:56.16:59,0,56	0/1:30,0:29:79.08:106,0,79	1/1:24,0:23:18.21:163,18,0	0/1:12,0:9:24.43:38,0,24	0/1:15,0:15:26.06:47,0,26	0/1:35,0:30:75.98:76,0,82	0/1:18,0:18:9.42:9,0,51	0/1:13,1:13:6.05:16,0,6	0/1:27,0:27:40.16:40,0,61	0/1:32,0:28:44.94:80,0,45	1/1:18,0:15:13.73:150,14,0	1/1:15,0:14:6.34:120,6,0	0/1:8,0:8:24.94:52,0,25
chr10	20265390	.	ATG	A	4813.15	PASS	AB=0.788;AC=43;AF=0.768;AN=56;BaseQRankSum=-1.196;DP=722;FS=1.982;HRun=0;HaplotypeScore=203.4590;InbreedingCoeff=0.0248;MQ=49.53;MQ0=37;MQRankSum=0.533;QD=7.56;ReadPosRankSum=4.621;VQSLOD=4.5892;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:27,4:27:15.53:124,0,16	1/1:9,3:11:3.38:68,3,0	0/0:37,1:13:9.03:0,9,141	0/0:46,1:24:8.87:0,9,120	1/1:15,8:21:16.38:192,16,0	0/1:20,7:26:12.61:57,0,13	1/1:22,11:31:11.73:104,12,0	0/1:26,8:27:9.07:293,0,9	1/1:20,0:23:26.89:118,27,0	1/1:31,4:30:14.19:509,14,0	0/1:16,7:22:19.01:124,0,19	0/1:20,7:25:21.51:157,0,22	1/1:16,3:16:11.18:98,11,0	1/1:27,10:33:23.38:278,23,0	0/1:24,2:26:48.61:49,0,722	1/1:16,9:23:23.88:260,24,0	1/1:24,6:29:22.50:315,23,0	1/1:23,2:24:28.95:366,29,0	0/1:8,5:10:54.04:179,0,54	1/1:10,5:15:14.44:127,14,0	1/1:33,5:33:13.25:121,13,0	1/1:16,3:19:4.85:87,5,0	1/1:13,4:16:5.97:72,6,0	0/1:22,6:27:53.55:147,0,54	1/1:19,12:28:12.69:290,13,0	0/1:4,14:15:5.05:359,0,5	1/1:11,5:15:20.62:237,21,0	1/1:6,2:8:7.87:83,8,0
chr10	20265408	.	G	GCA	2012.15	PASS	AB=0.902;AC=19;AF=0.339;AN=56;BaseQRankSum=-1.248;DP=704;FS=4.473;HRun=0;HaplotypeScore=207.9816;InbreedingCoeff=-0.4489;MQ=41.46;MQ0=35;MQRankSum=0.496;QD=4.30;ReadPosRankSum=0.162;VQSLOD=2.6435;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:30,1:27:99:106,0,182	0/1:12,0:11:24.80:25,0,51	0/0:13,0:4:9.03:0,9,138	0/0:24,0:11:18.94:0,19,222	0/0:28,0:26:29.20:0,29,236	0/0:30,0:29:13.98:0,14,203	0/1:26,2:27:33.61:47,0,34	0/0:35,0:24:14.01:0,14,287	0/0:29,0:27:41.88:0,42,386	0/1:22,11:28:99:504,0,143	0/1:23,2:24:67.73:91,0,68	0/0:25,0:23:12.01:0,12,127	0/1:21,1:19:49.45:73,0,49	0/1:26,6:29:72.05:74,0,72	0/0:27,0:26:65.23:0,65,955	0/1:20,4:23:55.63:128,0,56	0/1:17,13:29:72.30:247,0,72	0/1:24,5:28:19.15:372,0,19	0/1:14,0:11:55.72:56,0,107	0/1:17,1:18:32.54:82,0,33	0/1:32,3:30:38.81:39,0,100	0/1:10,8:19:37.90:63,0,38	0/1:21,3:21:6.12:35,0,6	0/1:25,2:28:99:106,0,107	0/1:35,0:31:0.34:0,0,205	0/0:25,0:21:39.11:0,39,292	0/1:16,0:16:42.43:42,0,119	0/1:8,0:8:4.46:78,0,4
chr10	20265409	.	TGC	T	2644.13	PASS	AB=0.995;AC=37;AF=0.661;AN=56;BaseQRankSum=0.779;DP=705;FS=21.576;HRun=0;HaplotypeScore=200.3512;InbreedingCoeff=-0.0700;MQ=41.52;MQ0=34;MQRankSum=2.341;QD=4.16;ReadPosRankSum=2.429;VQSLOD=0.9971;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:26:26.28:171,26,0	1/1:12,0:11:11.35:63,11,0	0/0:12,0:4:9.03:0,9,130	0/1:21,0:9:39.29:39,0,102	1/1:28,0:26:30.93:218,31,0	1/1:29,1:29:6.11:126,6,0	0/1:27,1:26:10.55:33,0,11	0/1:35,0:24:86.27:217,0,86	0/0:31,0:29:32.84:0,33,156	0/1:35,0:30:28.89:168,0,29	0/1:24,0:23:8.26:95,0,8	0/1:25,0:23:32.76:76,0,33	1/1:21,0:18:11.71:53,12,0	0/1:31,1:28:14.95:69,0,15	0/0:27,0:26:24.88:0,25,953	0/1:25,0:23:11.92:76,0,12	1/1:30,0:29:12.72:126,13,0	1/1:29,0:28:35.63:216,36,0	0/1:14,0:11:63.33:64,0,63	0/1:18,0:18:3.20:36,0,3	1/1:33,1:29:0.90:90,1,0	0/1:23,0:23:6.23:72,0,6	0/1:24,0:21:14.46:23,0,14	0/1:30,0:29:49.33:49,0,66	1/1:36,0:32:28.51:241,29,0	1/1:26,0:22:1.21:218,1,0	1/1:17,0:16:33.88:191,34,0	1/1:8,0:8:16.10:84,16,0
chr10	20265410	.	GCA	G	3875.81	PASS	AB=0.914;AC=29;AF=0.518;AN=56;BaseQRankSum=-3.134;DP=701;FS=11.055;HRun=0;HaplotypeScore=196.8051;InbreedingCoeff=-0.5146;MQ=41.70;MQ0=33;MQRankSum=2.337;QD=5.97;ReadPosRankSum=1.702;VQSLOD=2.4257;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:22,6:25:11.50:287,12,0	0/1:11,1:11:13.51:76,0,14	0/0:11,0:4:8.90:0,9,127	0/1:14,6:9:94.76:95,0,160	1/1:24,4:26:1.59:306,2,0	0/1:26,4:29:20.33:236,0,20	0/1:24,4:26:24.01:80,0,24	0/1:29,7:25:99:277,0,178	0/1:31,0:29:27.96:28,0,43	0/1:35,1:31:92.71:359,0,93	0/1:22,2:23:19.67:146,0,20	0/1:25,0:23:55.68:56,0,71	0/1:13,8:18:22.41:28,0,22	0/1:31,1:28:17.42:17,0,92	0/0:27,0:26:62.26:0,62,910	0/1:25,1:24:55.50:111,0,56	0/1:29,1:29:44.40:151,0,44	0/1:26,2:27:22.67:292,0,23	0/0:13,1:11:6.63:0,7,78	0/1:17,0:17:7.10:13,0,7	0/1:32,1:28:4.01:113,0,4	0/1:22,1:23:3.35:136,0,3	0/1:15,9:21:12.86:13,0,15	0/1:28,3:30:41.96:129,0,42	0/1:32,3:31:46.87:322,0,47	0/1:25,1:22:99:246,0,116	1/1:12,4:15:2.61:199,3,0	1/1:6,2:8:17.01:157,17,0
chr10	20265412	.	A	ATGTG	5435.84	PASS	AB=0.955;AC=44;AF=0.786;AN=56;BaseQRankSum=-0.321;DP=716;FS=3.118;HRun=0;HaplotypeScore=219.3088;InbreedingCoeff=0.2356;MQ=42.00;MQ0=33;MQRankSum=-0.401;QD=8.38;ReadPosRankSum=-1.526;VQSLOD=3.7599;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:23:15.24:145,15,0	1/1:12,0:11:3.47:27,3,0	0/0:9,0:4:2.99:0,3,24	0/1:19,0:8:66.07:66,0,73	1/1:28,0:26:15.31:148,15,0	1/1:29,0:29:9.40:62,9,0	1/1:28,0:26:11.35:189,11,0	1/1:37,0:26:16.37:173,16,0	0/0:19,0:29:16.11:0,16,137	1/1:35,1:32:59.33:1027,59,0	0/1:24,0:23:39.18:248,0,39	0/1:17,8:25:3.56:66,0,4	0/1:21,0:18:38.73:130,0,39	1/1:31,1:28:7.18:145,7,0	0/0:27,0:26:27.09:0,27,429	1/1:24,2:24:20.71:369,21,0	1/1:30,1:30:20.72:392,21,0	1/1:29,0:28:34.20:655,34,0	0/1:14,0:11:26.21:57,0,26	1/1:14,5:21:3.01:53,3,0	0/1:34,0:29:26.56:117,0,27	1/1:23,1:24:16.19:213,16,0	1/1:24,0:21:6.02:144,6,0	1/1:29,2:31:11.32:264,11,0	1/1:35,0:33:9.88:113,10,0	1/1:27,0:23:19.54:220,20,0	1/1:19,0:18:14.53:173,15,0	1/1:9,0:9:18.03:240,18,0
chr10	20266216	.	G	GTT	3896.89	PASS	AB=0.529;AC=35;AF=0.625;AN=56;BaseQRankSum=15.111;DP=566;FS=5.328;HRun=1;HaplotypeScore=109.1161;InbreedingCoeff=0.8946;MQ=76.38;MQ0=2;MQRankSum=-1.529;QD=11.10;ReadPosRankSum=0.015;VQSLOD=0.2904;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,126,1922	0/0:7,0:7:21.07:0,21,341	0/0:24,0:21:15.07:0,15,547	0/0:15,0:10:18.39:0,18,267	0/0:18,0:18:54.16:0,54,835	1/1:4,1:20:0.08:179,0,0	1/1:3,0:28:36.88:285,37,0	1/1:4,0:17:20.30:189,20,0	1/1:2,18:21:31.37:457,31,0	1/1:2,1:23:51.74:349,52,0	1/1:3,2:19:35.82:229,36,0	1/1:2,0:20:34.35:192,34,0	1/1:3,1:12:16.52:89,17,0	1/1:7,0:30:18.87:216,19,0	0/0:34,0:34:99:0,102,1622	1/1:4,0:19:15.66:144,16,0	1/1:3,1:29:44.98:304,45,0	1/1:0,0:13:31.92:178,32,0	1/1:4,0:21:43.15:261,43,0	1/1:2,2:12:23.98:191,24,0	1/1:2,0:13:31.95:186,32,0	1/1:4,0:20:28.21:173,28,0	0/1:2,0:18:3.99:135,0,4	1/1:3,3:16:17.70:142,18,0	0/0:26,0:26:75.23:0,75,1166	0/0:16,0:17:32.91:0,33,760	0/0:25,0:24:75.26:0,75,1215	0/0:5,0:5:15.05:0,15,244
chr10	20266423	.	G	GT	1216.02	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-7.882;DP=553;FS=0.000;HRun=7;HaplotypeScore=55.3895;InbreedingCoeff=0.9647;MQ=76.58;MQ0=0;MQRankSum=-1.479;QD=30.40;ReadPosRankSum=-2.506;VQSLOD=2.9363;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,123,1171	0/0:4,0:4:9.01:0,9,87	0/0:21,0:22:53.08:0,53,484	0/0:16,0:16:31.77:0,32,292	0/0:20,0:20:57.08:0,57,546	0/0:21,0:21:54.08:0,54,519	0/0:20,0:20:47.94:0,48,449	1/1:1,22:24:66.17:770,66,0	1/1:1,15:16:48.13:567,48,0	0/0:18,0:18:45.06:0,45,431	0/0:15,0:15:41.09:0,41,382	0/0:15,0:15:45.04:0,45,422	0/0:14,0:14:33.04:0,33,314	0/0:26,0:26:66.09:0,66,632	0/0:23,0:23:63.09:0,63,608	0/0:22,1:23:23.82:0,24,503	0/0:27,0:27:66.07:0,66,629	0/0:22,0:22:63.10:0,63,608	0/0:17,0:17:44.94:0,45,412	0/0:14,0:14:42.01:0,42,390	0/0:30,0:30:80.96:0,81,757	0/0:14,0:14:33:0,33,308	0/0:15,0:15:26.90:0,27,246	0/0:22,0:22:54.08:0,54,521	0/0:14,0:14:39.03:0,39,365	0/0:28,0:28:81.13:0,81,781	0/0:17,0:16:48.08:0,48,463	0/0:11,0:11:18.02:0,18,174
chr10	20268442	.	GT	G	4079.99	PASS	AB=0.829;AC=33;AF=0.589;AN=56;BaseQRankSum=9.538;DP=592;FS=0.747;HRun=13;HaplotypeScore=65.3326;InbreedingCoeff=0.7341;MQ=73.42;MQ0=0;MQRankSum=0.746;QD=11.06;ReadPosRankSum=5.120;VQSLOD=3.3239;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,1:41:71.58:0,72,783	0/0:3,0:3:6.01:0,6,58	0/0:21,2:19:6.13:0,6,171	0/1:15,2:16:14.88:15,0,140	0/0:19,0:21:59.74:0,60,539	1/1:6,17:24:17.56:283,18,0	1/1:5,11:16:29.34:218,29,0	0/0:26,0:29:48.04:0,48,471	0/0:20,0:20:41.17:0,41,384	1/1:8,16:24:22.82:296,23,0	1/1:6,10:17:37.82:268,38,0	1/1:2,14:17:43.79:312,44,0	1/1:6,9:15:20.80:153,21,0	1/1:1,13:14:32.81:241,33,0	0/0:23,0:26:59.85:0,60,544	1/1:5,13:21:6.75:186,7,0	1/1:9,24:35:66.69:471,67,0	1/1:7,17:27:4.37:331,4,0	1/1:10,11:21:6.54:205,7,0	1/1:7,14:23:36.81:252,37,0	1/1:8,11:19:23.84:175,24,0	1/1:2,16:18:32.74:241,33,0	1/1:3,18:21:44.69:328,45,0	0/1:8,7:16:81.98:102,0,82	0/0:24,0:24:61.78:0,62,561	0/1:21,2:23:1.82:2,0,285	0/0:22,1:23:31.99:0,32,446	0/0:11,0:12:23.15:0,23,242
chr10	20268574	.	AGTG	A	5253.27	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-9.415;DP=627;FS=10.287;HRun=0;HaplotypeScore=122.0155;InbreedingCoeff=0.9952;MQ=90.44;MQ0=0;MQRankSum=-2.384;QD=32.23;ReadPosRankSum=3.593;VQSLOD=4.8750;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,27:35:69.19:1008,69,0	1/1:4,7:11:18.06:271,18,0	0/0:26,0:26:63.20:0,63,1219	0/0:25,0:25:48.15:0,48,940	1/1:7,34:41:96.24:1387,96,0	0/0:21,0:21:54.19:0,54,1124	0/0:24,0:24:54.17:0,54,1098	0/0:36,0:36:87.28:0,87,1790	0/0:19,0:19:42.14:0,42,880	0/0:22,0:22:60.20:0,60,1220	0/0:7,0:7:15.05:0,15,315	0/0:16,0:16:45.15:0,45,947	0/0:19,0:19:51.15:0,51,1004	0/0:18,0:18:45.15:0,45,948	0/0:18,0:18:48.16:0,48,1011	0/0:21,0:21:60.21:0,60,1258	0/0:28,0:28:63.22:0,63,1327	0/0:17,0:16:42.14:0,42,885	0/0:13,0:13:33.09:0,33,654	0/0:38,0:38:87.30:0,87,1795	0/0:23,0:23:57.18:0,57,1160	0/0:18,0:18:45.15:0,45,928	0/0:24,0:24:54.18:0,54,1134	0/0:31,0:31:84.27:0,84,1726	1/1:4,10:14:26.96:331,27,0	1/1:6,18:24:57.19:857,57,0	1/1:7,21:28:66.22:993,66,0	1/1:0,10:10:27.09:407,27,0
chr10	20268746	.	G	GA	13411.66	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-16.353;DP=636;FS=0.319;HRun=6;HaplotypeScore=57.9405;InbreedingCoeff=0.9984;MQ=75.94;MQ0=0;MQRankSum=-2.111;QD=32.79;ReadPosRankSum=0.935;VQSLOD=5.0600;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,147,1480	0/0:11,0:11:24.04:0,24,245	0/0:26,0:25:51.09:0,51,512	0/0:16,0:15:32.98:0,33,312	0/0:20,0:19:51.11:0,51,520	1/1:0,24:24:69.22:868,69,0	1/1:3,16:19:45.14:566,45,0	1/1:3,30:33:93.22:1109,93,0	1/1:1,17:18:42.13:528,42,0	1/1:4,24:28:72.23:904,72,0	1/1:3,13:16:42.13:524,42,0	1/1:2,14:16:39.12:491,39,0	1/1:3,17:20:45.14:566,45,0	1/1:0,20:20:57.18:717,57,0	0/0:20,0:20:57.10:0,57,573	1/1:2,21:23:57.18:717,57,0	1/1:2,29:31:78.25:981,78,0	1/1:1,24:25:72.23:906,72,0	1/1:2,19:21:60.16:736,60,0	1/1:1,17:18:45.14:566,45,0	1/1:3,19:22:57.17:703,57,0	1/1:3,26:29:75.24:944,75,0	1/1:0,20:20:54.17:679,54,0	1/1:1,25:26:72.23:906,72,0	0/0:19,0:19:48.10:0,48,489	0/0:23,0:23:66.15:0,66,673	0/0:32,0:32:90.19:0,90,911	0/0:7,0:7:18.04:0,18,184
chr10	20268964	.	C	CT	4015.53	PASS	AB=0.749;AC=14;AF=0.250;AN=56;BaseQRankSum=-15.025;DP=578;FS=19.886;HRun=10;HaplotypeScore=113.8319;InbreedingCoeff=0.7640;MQ=71.60;MQ0=3;MQRankSum=-0.590;QD=20.91;ReadPosRankSum=-1.043;VQSLOD=2.4525;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,33:35:78.20:832,78,0	1/1:1,10:11:8.44:295,8,0	0/1:21,0:9:4.23:4,0,82	0/0:21,0:13:6.79:0,7,62	1/1:3,27:30:78.11:805,78,0	0/0:26,0:26:74.82:0,75,606	0/0:14,0:14:29.48:0,29,220	0/0:28,0:28:59.81:0,60,464	0/0:19,0:19:41.82:0,42,338	0/0:22,0:22:50.76:0,51,396	0/0:16,0:16:44.40:0,44,361	0/0:11,0:11:22.98:0,23,176	0/0:14,0:14:32.92:0,33,267	0/0:18,0:18:47.64:0,48,375	0/0:21,0:22:61.95:0,62,495	0/0:23,0:23:60.26:0,60,486	0/0:26,0:26:55.26:0,55,431	0/0:20,0:20:50.64:0,51,414	0/0:25,0:25:42.61:0,43,321	0/0:22,0:23:55.91:0,56,444	0/0:14,0:14:29.92:0,30,242	0/0:17,0:17:40.72:0,41,311	0/0:19,0:19:49.74:0,50,385	0/0:8,0:8:20.94:0,21,168	1/1:4,16:20:1.60:343,2,0	1/1:6,26:32:10.86:717,11,0	1/1:4,25:29:69.17:735,69,0	0/1:2,11:13:8.77:284,0,9
chr10	20270203	.	A	ACTGT	30301.61	PASS	AB=1.000;AC=37;AF=0.661;AN=56;BaseQRankSum=-13.986;DP=758;FS=16.385;HRun=0;HaplotypeScore=119.4703;InbreedingCoeff=0.9256;MQ=86.15;MQ0=1;MQRankSum=-8.092;QD=59.30;ReadPosRankSum=0.656;VQSLOD=5.7331;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,141,2575	0/0:9,0:9:27.09:0,27,495	0/0:29,0:29:81.24:0,81,1371	0/0:27,0:27:72.20:0,72,1288	0/0:29,0:29:87.30:0,87,1615	1/1:4,25:28:69.24:1839,69,0	1/1:1,27:30:72.25:1875,72,0	1/1:7,20:29:72.23:1755,72,0	1/1:1,27:29:78.27:2076,78,0	1/1:1,14:18:51.16:1197,51,0	1/1:6,19:26:54.14:1378,54,0	1/1:8,21:30:72.25:1853,72,0	1/1:4,17:22:54.19:1437,54,0	1/1:3,22:27:78.27:2002,78,0	0/0:30,0:30:81.26:0,81,1470	1/1:6,19:25:66.23:1731,66,0	1/1:3,35:38:99:2614,99,0	1/1:5,25:30:63.22:1680,63,0	1/1:9,8:22:60.16:1288,60,0	1/1:7,24:33:69.24:1810,69,0	1/1:4,26:30:59.95:1598,60,0	1/1:2,23:25:54.19:1438,54,0	1/1:0,16:18:36.12:958,36,0	1/1:2,27:29:66.23:1760,66,0	0/0:23,0:23:63.20:0,63,1144	0/1:21,0:21:11.48:11,0,912	0/0:26,0:26:78.27:0,78,1446	0/0:20,0:20:54.19:0,54,990
chr10	20271544	.	ACCCACCCCACCCCC	A	1038.67	PASS	AB=0.940;AC=21;AF=0.389;AN=54;BaseQRankSum=-1.492;DP=339;FS=2.358;HRun=0;HaplotypeScore=155.9480;InbreedingCoeff=0.1426;MQ=67.29;MQ0=1;MQRankSum=-1.186;QD=5.25;ReadPosRankSum=-4.704;VQSLOD=1.2989;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:45.14:0,45,2448	0/0:3,0:3:9.03:0,9,584	0/0:15,0:13:39.13:0,39,1510	0/0:23,0:16:37.04:0,37,1439	0/0:17,0:17:51.17:0,51,3102	1/1:22,0:22:15.02:224,15,0	1/1:12,0:12:6.01:73,6,0	0/1:5,10:13:23.12:199,0,23	0/1:12,0:12:62.12:68,0,62	0/1:15,0:15:86.29:86,0,314	1/1:13,0:13:3:25,3,0	0/0:9,0:9:3.01:0,3,63	0/1:11,0:11:41.56:63,0,42	0/1:6,0:6:1.55:35,0,2	0/0:7,0:7:21.05:0,21,903	0/1:8,0:8:18.98:19,0,68	0/1:11,0:10:61.24:167,0,61	0/1:14,0:13:99:211,0,223	0/1:10,2:11:1.94:2,0,249	1/1:11,0:11:2.94:18,3,0	./.	1/1:12,4:16:0.47:1,0,0	1/1:16,4:20:0.47:2,0,0	0/0:11,0:11:1.25:0,1,3	0/0:13,0:13:39.11:0,39,1781	0/0:10,0:10:30.09:0,30,1308	0/0:12,0:12:36.12:0,36,2503	0/0:2,0:2:6.02:0,6,366
chr10	20271548	.	ACCC	A	896.82	PASS	AB=1.000;AC=26;AF=0.500;AN=52;BaseQRankSum=8.877;DP=323;FS=3.170;HRun=4;HaplotypeScore=107.9120;InbreedingCoeff=0.6589;MQ=69.76;MQ0=2;MQRankSum=-7.229;QD=5.31;ReadPosRankSum=0.540;VQSLOD=-0.4575;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:48.14:0,48,935	0/0:4,0:4:12.04:0,12,225	0/0:17,0:14:31.22:0,31,670	0/0:24,0:17:6.05:0,6,492	0/0:16,0:16:48.15:0,48,1038	1/1:20,1:21:9.03:102,9,0	1/1:7,3:10:2.99:23,3,0	1/1:14,1:13:17.79:180,18,0	0/1:11,0:11:4.33:4,0,46	1/1:14,1:15:30.14:224,30,0	./.	1/1:8,0:8:1.25:3,1,0	1/1:8,0:8:1.25:3,1,0	1/1:3,1:4:3.01:41,3,0	0/0:6,0:6:15.04:0,15,279	0/0:7,0:7:1.55:0,2,4	1/1:10,0:9:14.78:139,15,0	1/1:12,0:11:31.56:221,32,0	1/1:9,1:9:19.88:121,20,0	0/1:10,0:10:0:0,0,0	./.	1/1:15,0:15:0.47:1,0,0	1/1:17,3:20:0.47:2,0,0	0/0:9,2:11:0.47:0,0,1	0/0:12,0:12:33.10:0,33,640	0/0:8,0:8:10.02:0,10,419	0/0:13,0:13:39.13:0,39,863	0/0:3,0:3:9.02:0,9,161
chr10	20271549	.	C	CA	1566.77	PASS	AB=0.640;AC=30;AF=0.556;AN=54;BaseQRankSum=9.159;DP=309;FS=7.594;HRun=1;HaplotypeScore=97.0808;InbreedingCoeff=0.6336;MQ=70.91;MQ0=2;MQRankSum=-7.939;QD=9.44;ReadPosRankSum=0.013;VQSLOD=0.7866;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:48.14:0,48,639	0/0:4,0:4:12.04:0,12,164	0/0:16,0:14:41.21:0,41,477	0/0:24,0:17:7.74:0,8,390	0/0:16,0:16:48.15:0,48,654	1/1:4,15:19:9.03:102,9,0	1/1:4,5:9:2.99:23,3,0	1/1:11,4:13:18:183,18,0	1/1:2,7:10:9.12:52,9,0	1/1:2,9:11:33.08:416,33,0	./.	1/1:0,8:8:2.98:22,3,0	1/1:0,8:8:2.97:20,3,0	1/1:1,3:4:3.01:30,3,0	0/0:5,0:5:15.04:0,15,192	1/1:0,7:7:2.90:16,3,0	1/1:1,7:8:15.01:184,15,0	1/1:1,10:10:32.97:368,33,0	1/1:3,7:9:21.07:300,21,0	0/1:1,9:10:0:0,0,0	1/1:1,1:2:2.74:12,3,0	0/1:4,11:15:0:0,0,0	0/0:7,13:20:0.47:0,0,1	0/1:2,8:10:0:0,0,0	0/0:12,0:12:33.09:0,33,431	0/1:8,1:9:14.43:14,0,253	0/0:13,0:13:39.13:0,39,542	0/0:3,0:3:9.02:0,9,109
chr10	20271553	.	ACCCCC	A	677.47	PASS	AB=0.936;AC=23;AF=0.460;AN=50;BaseQRankSum=8.546;DP=309;FS=10.424;HRun=6;HaplotypeScore=112.4778;InbreedingCoeff=0.5385;MQ=71.12;MQ0=3;MQRankSum=-6.627;QD=4.37;ReadPosRankSum=0.191;VQSLOD=-0.5041;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:42.08:0,42,1132	0/0:4,0:4:12.04:0,12,329	0/0:17,0:14:35.04:0,35,798	0/1:23,0:16:14:14,0,554	0/0:16,0:16:43.96:0,44,1332	1/1:15,1:17:6.02:83,6,0	./.	1/1:13,2:13:13.27:154,13,0	0/1:9,0:10:18.94:19,0,73	1/1:9,1:11:17.91:178,18,0	./.	0/0:8,0:8:2.80:0,3,13	0/0:8,0:8:2.37:0,2,8	1/1:4,0:4:5.97:67,6,0	0/0:5,0:5:15.04:0,15,385	0/1:8,1:9:14.78:15,0,15	1/1:9,0:8:10.37:103,10,0	1/1:8,1:9:16.47:120,16,0	1/1:9,1:9:14.64:65,15,0	./.	1/1:2,0:2:3:26,3,0	1/1:14,1:15:0.47:1,0,0	1/1:19,0:20:0.94:2,1,0	0/0:8,0:10:0.89:0,1,2	0/0:12,0:12:33.08:0,33,749	0/0:10,0:10:20.97:0,21,551	0/0:13,0:13:39.13:0,39,1198	0/0:3,0:3:9.03:0,9,225
chr10	20271554	.	C	CA	1211.04	PASS	AB=0.733;AC=29;AF=0.558;AN=52;BaseQRankSum=9.165;DP=309;FS=8.210;HRun=1;HaplotypeScore=98.2600;InbreedingCoeff=0.5817;MQ=71.05;MQ0=3;MQRankSum=-8.191;QD=6.62;ReadPosRankSum=0.376;VQSLOD=0.1554;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:39.12:0,39,528	0/0:4,0:4:12.04:0,12,168	0/0:17,0:14:38.36:0,38,439	0/1:23,0:16:9.53:10,0,295	0/0:16,0:16:45.13:0,45,610	1/1:3,14:17:6.01:58,6,0	./.	1/1:12,3:13:11.98:112,12,0	1/1:3,7:10:9.07:36,9,0	1/1:2,9:11:33.01:374,33,0	./.	1/1:0,8:8:2.94:18,3,0	1/1:1,8:8:2.92:17,3,0	1/1:0,4:4:2.99:23,3,0	0/0:5,0:5:15.05:0,15,209	1/1:1,8:9:4.56:46,5,0	1/1:2,7:8:11.49:101,11,0	1/1:2,8:9:26.56:263,27,0	1/1:3,7:9:21.06:272,21,0	0/1:4,7:11:0:0,0,0	1/1:0,3:3:3.01:40,3,0	0/1:5,10:15:0:0,0,0	0/0:5,15:20:0.47:0,0,1	0/1:2,8:10:0:0,0,0	0/0:11,0:11:33.09:0,33,414	0/1:8,1:9:10.86:11,0,265	0/0:14,0:14:39.13:0,39,545	0/0:3,0:3:9.03:0,9,126
chr10	20271567	.	C	CAGAGAG	880.79	PASS	AB=1.000;AC=22;AF=0.407;AN=54;BaseQRankSum=8.656;DP=390;FS=0.000;HRun=0;HaplotypeScore=174.7901;InbreedingCoeff=0.0704;MQ=68.14;MQ0=3;MQRankSum=-7.417;QD=3.72;ReadPosRankSum=1.117;VQSLOD=2.4923;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:36.12:0,36,843	0/0:6,0:6:18.06:0,18,433	0/0:15,0:12:18.85:0,19,471	0/0:22,0:16:32.85:0,33,721	0/0:21,0:21:60.21:0,60,1413	1/1:23,0:23:8.96:82,9,0	1/1:12,0:12:2.90:16,3,0	0/1:27,0:25:25.11:25,0,220	1/1:5,8:14:3:28,3,0	0/1:14,0:14:6.97:113,0,7	0/1:18,0:18:18.09:163,0,18	0/1:12,0:12:46.21:83,0,46	0/1:16,0:15:71.81:109,0,72	0/1:7,0:7:17.07:17,0,17	0/0:6,0:6:18.04:0,18,384	0/1:14,0:14:79.46:102,0,79	0/1:12,0:11:38.90:81,0,39	1/1:13,0:12:3.62:55,4,0	0/1:15,0:14:53:53,0,92	0/1:16,0:16:14.95:40,0,15	1/1:3,0:3:3.01:41,3,0	0/0:15,0:15:3.46:0,3,25	1/1:21,0:21:5.26:39,5,0	./.	0/0:11,0:11:33.08:0,33,698	0/0:12,0:12:25.98:0,26,694	0/0:17,0:17:48.16:0,48,1122	0/0:2,0:2:6.02:0,6,144
chr10	20273588	.	G	GC	16824.96	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-16.507;DP=714;FS=3.473;HRun=3;HaplotypeScore=67.0006;InbreedingCoeff=0.9998;MQ=79.79;MQ0=0;MQRankSum=-2.522;QD=36.50;ReadPosRankSum=1.585;VQSLOD=5.6030;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,141,1661	0/0:11,0:11:33.05:0,33,359	0/0:20,0:20:44.19:0,44,522	0/0:14,0:14:33.10:0,33,393	0/0:22,0:22:60.17:0,60,710	1/1:0,23:23:63.21:882,63,0	1/1:3,17:20:42.14:588,42,0	1/1:3,20:23:60.19:822,60,0	1/1:1,26:27:72.24:1008,72,0	1/1:0,27:27:81.21:1093,81,0	1/1:0,16:16:45.08:630,45,0	1/1:2,36:38:99:1403,102,0	1/1:1,20:21:60.20:839,60,0	1/1:3,18:21:48.16:672,48,0	0/0:41,0:41:99:0,120,1428	1/1:1,21:22:60.20:839,60,0	1/1:1,20:21:45.15:630,45,0	1/1:0,22:22:66.22:924,66,0	1/1:3,27:30:81.20:1073,81,0	1/1:0,32:32:93.24:1277,93,0	1/1:0,30:30:78.26:1092,78,0	1/1:2,28:30:74.89:996,75,0	1/1:1,24:25:63.04:881,63,0	1/1:1,32:33:84.28:1176,84,0	0/0:20,0:20:54.16:0,54,647	0/0:32,1:33:45.25:0,45,957	0/0:30,0:30:84.22:0,84,991	0/0:10,0:10:30.09:0,30,360
chr10	20274632	.	G	GA	9363.22	PASS	AB=0.885;AC=37;AF=0.661;AN=56;BaseQRankSum=-11.778;DP=511;FS=5.269;HRun=8;HaplotypeScore=61.1526;InbreedingCoeff=0.9040;MQ=80.13;MQ0=0;MQRankSum=1.950;QD=26.52;ReadPosRankSum=1.561;VQSLOD=5.7349;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:45.02:0,45,411	0/0:8,0:8:15:0,15,137	0/0:22,0:21:40.30:0,40,374	0/0:13,0:12:23.04:0,23,198	0/0:25,0:25:69.01:0,69,626	1/1:3,5:8:15.01:159,15,0	1/1:1,16:17:42.12:483,42,0	1/1:5,15:20:45.13:519,45,0	1/1:4,13:17:17.50:437,17,0	1/1:7,13:20:14.65:422,15,0	1/1:3,15:19:26.48:520,26,0	1/1:5,7:12:21.06:242,21,0	1/1:1,17:18:48.14:551,48,0	1/1:1,12:13:36.10:410,36,0	0/0:22,0:22:57.02:0,57,520	1/1:3,13:16:39.12:450,39,0	1/1:6,21:27:63.18:718,63,0	1/1:0,22:22:57.17:658,57,0	1/1:4,19:23:57.15:639,57,0	1/1:7,25:32:78.22:893,78,0	1/1:1,12:13:33.10:381,33,0	1/1:0,17:17:51.15:589,51,0	1/1:0,15:15:45.13:519,45,0	1/1:0,21:21:63.19:727,63,0	0/0:21,0:21:57.03:0,57,522	0/1:20,3:23:43.85:44,0,395	0/0:24,0:24:56.97:0,57,505	0/0:4,0:4:10.82:0,11,87
chr10	20274677	.	AACACACACACACACACACACACAC	A	4924.45	PASS	AB=0.714;AC=11;AF=0.196;AN=56;BaseQRankSum=7.081;DP=454;FS=16.987;HRun=0;HaplotypeScore=274.6280;InbreedingCoeff=0.7723;MQ=64.43;MQ0=11;MQRankSum=-6.232;QD=60.05;ReadPosRankSum=0.483;VQSLOD=2.8468;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:12,3:15:3:0,3,25	1/1:2,3:5:9.03:567,9,0	0/0:32,0:19:9.03:0,9,447	0/0:27,0:15:21.07:0,21,877	1/1:18,5:23:12:572,12,0	0/0:7,0:9:18.05:0,18,1265	0/0:14,0:20:33.11:0,33,2875	0/0:16,0:16:14.71:0,15,523	0/0:11,0:13:21.07:0,21,1702	0/0:15,0:16:33.11:0,33,2571	0/0:16,0:17:21.54:0,22,1807	0/0:6,0:9:18.06:0,18,1522	0/0:6,0:7:12.04:0,12,751	0/0:8,0:9:12.04:0,12,899	0/0:14,0:17:27.09:0,27,2121	0/0:8,0:13:27.09:0,27,2265	0/0:19,0:20:36.11:0,36,2598	0/0:11,0:14:21.54:0,22,1560	0/0:18,0:19:27.09:0,27,1913	0/0:16,0:19:45.15:0,45,2739	0/0:21,0:22:45.63:0,46,3820	0/0:10,0:15:33.10:0,33,2435	0/0:8,0:13:27.09:0,27,2254	0/0:26,0:27:37.07:0,37,2338	1/1:10,13:23:27.09:1700,27,0	0/1:6,4:10:29.39:575,0,29	1/1:8,10:18:18.06:1133,18,0	1/1:1,2:3:6.02:378,6,0
chr10	20274830	.	GGTGTGTGTGTGT	G	3040.86	PASS	AB=0.996;AC=18;AF=0.321;AN=56;BaseQRankSum=-7.605;DP=594;FS=3.696;HRun=0;HaplotypeScore=191.4528;InbreedingCoeff=-0.2595;MQ=64.25;MQ0=17;MQRankSum=4.945;QD=8.52;ReadPosRankSum=1.984;VQSLOD=2.2412;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:26:29.85:0,30,536	0/0:11,0:11:3.48:0,3,142	0/0:45,0:13:2.50:0,2,45	0/0:40,0:15:26.78:0,27,251	0/0:17,0:16:9.02:0,9,314	0/1:18,1:18:99:137,0,176	0/1:20,0:20:15.46:194,0,15	1/1:13,0:12:15.01:193,15,0	0/1:12,0:12:14.72:15,0,80	0/1:35,0:34:99:415,0,259	0/1:14,0:14:15.20:186,0,15	0/1:17,0:17:99:173,0,164	0/1:11,0:11:27:74,0,27	0/1:14,0:14:66.72:102,0,67	0/0:19,0:19:39.01:0,39,991	0/1:21,0:21:30.70:105,0,31	0/1:41,0:41:99:104,0,369	0/1:13,0:14:14.19:14,0,120	1/1:13,13:26:1.47:316,1,0	0/0:13,0:13:6:0,6,113	0/1:50,0:47:62.90:742,0,63	0/0:10,0:10:1.47:0,1,39	0/1:9,0:9:18.51:19,0,37	0/1:41,0:41:99:412,0,316	0/0:15,0:16:20.93:0,21,484	0/0:16,0:16:29.78:0,30,278	0/0:16,0:16:20.07:0,20,608	0/0:8,0:8:8.99:0,9,160
chr10	20274844	.	T	TGA	2959.90	PASS	AB=0.961;AC=31;AF=0.554;AN=56;BaseQRankSum=0.219;DP=596;FS=9.898;HRun=0;HaplotypeScore=125.1906;InbreedingCoeff=0.2796;MQ=53.45;MQ0=28;MQRankSum=3.011;QD=7.03;ReadPosRankSum=5.346;VQSLOD=2.5885;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:33:46.98:0,47,370	0/0:9,0:9:0.09:0,0,41	0/0:35,0:4:2.50:0,2,45	0/0:33,0:10:26.88:0,27,273	0/1:16,0:14:1.09:1,0,41	0/1:19,0:18:1.09:67,0,1	1/1:28,0:28:30.31:240,30,0	0/1:6,6:12:8.18:165,0,8	1/1:14,0:13:7.01:48,7,0	1/1:28,0:27:31.34:431,31,0	1/1:13,0:13:2.18:105,2,0	0/1:17,0:17:9.67:200,0,10	1/1:10,0:9:14.12:91,14,0	1/1:12,0:12:23.04:149,23,0	0/0:22,0:22:47.99:0,48,552	1/1:18,0:17:16.91:130,17,0	1/1:41,0:41:35.41:215,35,0	1/1:15,0:15:5.71:50,6,0	0/1:24,0:22:72:247,0,72	0/1:17,0:16:7.97:8,0,9	0/1:53,0:49:19.88:452,0,20	1/1:14,0:13:2.27:12,2,0	1/1:12,0:12:8.35:50,8,0	0/1:40,0:40:46.78:463,0,47	0/0:15,0:15:23.80:0,24,192	0/0:16,0:15:34.14:0,34,270	0/1:17,0:17:15.62:16,0,97	0/0:11,0:10:6.67:0,7,103
chr10	20274852	.	T	TGTGA	673.89	PASS	AB=0.955;AC=10;AF=0.179;AN=56;BaseQRankSum=-3.645;DP=575;FS=0.628;HRun=0;HaplotypeScore=138.5625;InbreedingCoeff=0.0777;MQ=51.87;MQ0=28;MQRankSum=0.092;QD=4.40;ReadPosRankSum=-1.717;VQSLOD=2.4838;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:28:35.43:186,0,35	0/1:9,0:9:11.25:64,0,11	0/0:26,0:1:0.47:0,0,1	0/0:28,0:5:12.02:0,12,138	0/1:8,9:15:4.99:99,0,5	0/0:19,0:18:11.86:0,12,91	0/0:23,0:23:5.09:0,5,44	0/0:16,0:14:38.32:0,38,248	0/0:16,0:15:8.74:0,9,103	0/0:27,0:26:61.95:0,62,475	0/0:13,0:14:17.74:0,18,121	0/0:17,0:17:25.93:0,26,240	0/0:10,0:9:8.90:0,9,70	0/0:7,0:7:6:0,6,55	0/0:22,0:22:39.06:0,39,564	0/0:15,0:14:5.80:0,6,55	0/0:39,0:38:23.27:0,23,239	0/0:16,0:16:9.02:0,9,94	0/1:25,0:23:17.96:18,0,234	0/0:18,0:17:5.96:0,6,50	0/0:52,0:48:78.48:0,78,606	0/0:17,0:16:3:0,3,32	0/1:17,0:17:0.64:1,0,26	0/0:39,0:40:6.06:0,6,469	0/1:13,0:13:15.96:16,0,40	0/1:14,0:13:32.14:102,0,32	1/1:18,0:19:21.84:269,22,0	0/1:9,0:8:5.03:60,0,5
chr10	20274854	.	TGTGA	T	4531.11	PASS	AB=0.953;AC=42;AF=0.750;AN=56;BaseQRankSum=2.303;DP=562;FS=0.000;HRun=0;HaplotypeScore=118.4193;InbreedingCoeff=-0.0701;MQ=52.06;MQ0=27;MQRankSum=0.981;QD=8.73;ReadPosRankSum=-0.055;VQSLOD=3.8445;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:31,0:30:41.67:222,0,42	0/1:4,0:9:27.51:37,0,28	0/0:24,0:2:2.96:0,3,21	0/1:26,0:4:4.70:5,0,13	0/1:17,0:15:12.93:13,0,57	1/1:4,15:18:12.26:130,12,0	1/1:2,21:23:2.52:52,3,0	0/1:15,0:13:40.52:122,0,41	1/1:3,13:15:4.85:109,5,0	1/1:3,24:26:37.70:518,38,0	1/1:13,0:13:20.78:185,21,0	1/1:17,0:17:41.55:396,42,0	1/1:3,6:8:3.01:57,3,0	1/1:1,6:7:6.02:110,6,0	0/0:19,0:19:38.84:0,39,498	1/1:2,12:13:2.90:56,3,0	0/1:5,35:39:15.32:268,0,15	1/1:1,15:16:11.99:188,12,0	0/1:26,0:24:37.93:172,0,38	1/1:3,15:17:5.69:94,6,0	1/1:51,0:47:67.61:606,68,0	1/1:2,16:17:3.36:57,3,0	1/1:2,15:17:5.26:93,5,0	1/1:34,3:37:79.77:767,80,0	0/1:13,0:13:48.47:77,0,48	1/1:14,0:13:8.81:129,9,0	0/1:6,0:17:32.51:33,0,65	0/1:4,0:7:9.25:38,0,9
chr10	20275121	.	C	CGAT	2052.65	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=-6.415;DP=746;FS=2.613;HRun=0;HaplotypeScore=177.6477;InbreedingCoeff=-0.2701;MQ=67.17;MQ0=0;MQRankSum=0.165;QD=4.35;ReadPosRankSum=-6.031;VQSLOD=0.8202;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,111,1514	0/0:13,0:13:33.07:0,33,468	0/0:36,0:33:68.03:0,68,784	0/0:21,0:20:53.06:0,53,630	0/0:21,0:21:39.01:0,39,542	0/1:27,0:27:48.82:49,0,319	0/1:34,0:34:99:207,0,274	0/1:30,0:30:99:213,0,161	1/1:1,21:22:30.10:629,30,0	0/1:38,0:37:99:207,0,270	0/1:24,0:24:69.36:69,0,205	0/1:30,0:30:70.42:70,0,325	0/0:26,0:26:9.48:0,9,306	0/1:25,0:25:99:102,0,255	0/0:23,0:23:63.04:0,63,810	0/0:15,0:15:13.14:0,13,210	0/1:33,0:33:81.49:81,0,299	0/1:25,0:24:51.80:52,0,255	0/1:24,0:24:69.86:167,0,70	0/1:21,0:21:65.68:207,0,66	0/1:46,0:46:66.48:66,0,533	0/1:18,0:18:10.39:10,0,180	0/1:20,0:20:29.47:29,0,188	0/1:55,0:55:58.89:59,0,616	0/0:15,0:15:36.02:0,36,480	0/0:33,0:33:68.79:0,69,765	0/0:14,0:14:39:0,39,510	0/0:14,0:14:21.02:0,21,297
chr10	20279757	.	TACAC	T	1626.34	PASS	AB=0.961;AC=41;AF=0.820;AN=50;BaseQRankSum=3.031;DP=455;FS=15.759;HRun=0;HaplotypeScore=80.5325;InbreedingCoeff=0.2777;MQ=70.86;MQ0=11;MQRankSum=-2.507;QD=4.67;ReadPosRankSum=-1.020;VQSLOD=0.2547;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:21:1.78:21,2,0	1/1:5,0:7:3:28,3,0	./.	./.	0/1:13,0:15:12.33:15,0,12	1/1:11,4:15:3.01:46,3,0	1/1:17,3:19:6.02:92,6,0	./.	1/1:8,0:13:9.01:84,9,0	0/1:12,0:12:3.11:3,0,37	1/1:16,4:20:3.01:46,3,0	1/1:14,4:18:9.03:138,9,0	1/1:10,4:13:2.78:46,3,0	1/1:10,8:18:5.89:92,6,0	0/0:13,0:13:21.07:0,21,390	1/1:9,4:14:12.03:166,12,0	1/1:11,9:19:15.94:232,16,0	1/1:10,6:16:3.01:46,3,0	1/1:11,0:11:6.01:62,6,0	0/0:15,0:15:15.05:0,15,238	1/1:11,4:15:5.59:73,6,0	0/1:15,0:15:19.33:30,0,19	1/1:9,1:11:10.58:112,11,0	1/1:12,5:17:12:158,12,0	1/1:14,0:18:18:160,18,0	1/1:17,0:23:8.94:84,9,0	1/1:11,0:12:3:28,3,0	0/0:8,0:8:1.81:0,2,7
chr10	20281296	.	A	AAC	8779.32	PASS	AB=0.683;AC=19;AF=0.339;AN=56;BaseQRankSum=-13.419;DP=865;FS=0.362;HRun=0;HaplotypeScore=147.9934;InbreedingCoeff=0.0026;MQ=59.08;MQ0=13;MQRankSum=2.636;QD=17.35;ReadPosRankSum=0.195;VQSLOD=4.8364;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:53:68.14:0,68,335	0/0:1,0:8:17.04:0,17,84	0/0:23,0:9:11.62:0,12,107	0/0:20,0:5:3:0,3,30	0/0:10,0:31:45.45:0,45,224	0/1:16,10:26:93.10:416,0,93	1/1:10,16:27:39.12:597,39,0	0/0:46,0:49:31.24:0,31,452	0/0:22,0:24:41.74:0,42,435	0/1:20,14:36:54.52:712,0,55	0/1:7,14:22:0.81:414,0,1	0/1:13,7:21:69.81:263,0,70	0/1:22,18:42:86.54:665,0,87	0/1:23,13:39:27.03:566,0,27	0/0:33,0:37:68.64:0,69,706	0/1:12,17:31:22.51:721,0,23	1/1:14,17:31:44.98:657,45,0	0/1:8,8:16:40.74:294,0,41	0/1:16,4:20:46.79:209,0,47	0/1:13,18:30:13.65:667,0,14	0/1:29,20:53:44.58:638,0,45	1/1:6,15:22:21.07:322,21,0	0/1:12,12:25:34.74:362,0,35	0/1:27,35:63:2.63:1278,0,3	0/0:20,0:44:45.36:0,45,221	0/0:11,1:29:1.23:0,1,168	0/0:12,0:29:45.45:0,45,224	0/0:3,0:10:17.04:0,17,84
chr10	20283603	.	TC	T	12753.76	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=12.605;DP=630;FS=5.723;HRun=4;HaplotypeScore=73.2202;InbreedingCoeff=0.9996;MQ=87.46;MQ0=0;MQRankSum=-4.058;QD=32.29;ReadPosRankSum=0.494;VQSLOD=5.3461;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:78.26:0,78,1091	0/0:12,0:12:36.10:0,36,486	0/0:28,0:28:75.24:0,75,1013	0/0:24,0:24:56.81:0,57,712	0/0:21,0:21:63.21:0,63,876	1/1:0,21:21:63.19:755,63,0	1/1:1,17:18:45.13:534,45,0	1/1:4,27:31:84.19:948,84,0	1/1:0,17:17:51.16:612,51,0	1/1:1,25:26:75.23:900,75,0	1/1:2,20:22:57.17:683,57,0	1/1:0,22:22:60.18:719,60,0	1/1:1,20:21:60.18:720,60,0	1/1:3,24:27:66.20:792,66,0	0/0:29,0:29:87.29:0,87,1218	1/1:1,26:27:72.22:864,72,0	1/1:1,27:28:66.20:792,66,0	1/1:0,11:11:30.09:360,30,0	1/1:1,20:21:60.14:692,60,0	1/1:0,23:23:63.19:756,63,0	1/1:0,22:22:66.20:792,66,0	1/1:1,30:31:87.27:1044,87,0	1/1:1,14:15:39.12:468,39,0	1/1:0,12:12:27.08:324,27,0	0/0:22,0:22:66.22:0,66,924	0/0:34,0:34:99:0,102,1407	0/0:29,0:29:81.25:0,81,1115	0/0:9,0:9:27.07:0,27,360
chr10	20284271	.	TA	T	569.67	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=0.207;DP=529;FS=3.291;HRun=10;HaplotypeScore=95.7775;InbreedingCoeff=0.7910;MQ=66.89;MQ0=6;MQRankSum=0.035;QD=17.26;ReadPosRankSum=-0.367;VQSLOD=3.7012;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,2:20:1.95:0,2,440	0/0:7,0:6:15.04:0,15,166	0/0:20,0:9:11.31:0,11,86	0/0:22,0:12:2.95:0,3,30	0/0:25,0:24:63.08:0,63,675	0/0:14,0:14:28.25:0,28,276	0/0:28,0:28:62.63:0,63,643	1/1:4,14:18:45.39:381,45,0	1/1:2,13:15:35.98:310,36,0	0/0:22,0:22:41.90:0,42,438	0/0:14,0:14:39:0,39,388	0/0:22,1:23:40.05:0,40,644	0/0:12,0:12:33.06:0,33,348	0/0:18,0:18:47.95:0,48,481	0/0:17,0:17:45.07:0,45,469	0/0:18,0:18:48.10:0,48,514	0/0:31,0:31:69.15:0,69,749	0/0:21,0:20:42.11:0,42,463	0/0:12,0:12:22.05:0,22,274	0/0:16,0:16:39.06:0,39,418	0/0:17,0:17:39.56:0,40,423	0/0:22,0:22:45.86:0,46,467	0/0:18,1:19:30.68:0,31,455	0/0:27,0:27:56.86:0,57,611	0/0:12,1:13:10.29:0,10,329	0/0:22,0:22:54.14:0,54,590	0/0:23,2:25:17.08:0,17,634	0/0:10,0:10:27.05:0,27,289
chr10	20284283	.	C	CGTGT	6939.15	PASS	AB=0.705;AC=27;AF=0.500;AN=54;BaseQRankSum=-10.074;DP=576;FS=5.283;HRun=0;HaplotypeScore=127.2436;InbreedingCoeff=0.5522;MQ=59.74;MQ0=17;MQRankSum=-1.199;QD=18.50;ReadPosRankSum=-1.116;VQSLOD=4.2924;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:22:24.03:0,24,243	0/0:2,0:6:12.02:0,12,131	0/1:18,0:6:0:0,0,0	./.	0/0:9,0:21:39.04:0,39,363	1/1:9,1:18:8.50:96,8,0	0/1:11,13:26:8.89:701,0,9	0/0:17,0:21:17.49:0,17,136	0/0:15,0:17:26.96:0,27,355	1/1:10,1:23:33.78:491,34,0	1/1:9,4:14:8.77:155,9,0	1/1:6,10:24:40.61:696,41,0	1/1:9,5:14:15.02:308,15,0	1/1:11,7:19:20.28:381,20,0	0/0:8,0:21:30.03:0,30,279	1/1:8,11:22:38.07:672,38,0	0/1:17,9:31:63.48:419,0,63	0/1:10,9:22:52.36:594,0,52	1/1:13,1:17:14.49:176,14,0	1/1:6,11:20:29.57:597,30,0	1/1:10,5:20:26.03:406,26,0	0/1:13,5:22:75.30:212,0,75	0/1:11,7:22:1.56:376,0,2	0/1:11,17:31:6.36:658,0,6	0/0:4,0:15:29.99:0,30,267	0/0:11,0:20:24.03:0,24,224	0/0:12,0:25:39.04:0,39,360	0/0:4,0:15:27.03:0,27,251
chr10	20285408	.	C	CAA	34012.01	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-11.600;DP=754;FS=1.581;HRun=1;HaplotypeScore=72.7157;InbreedingCoeff=0.9993;MQ=83.67;MQ0=4;MQRankSum=-8.416;QD=49.80;ReadPosRankSum=4.666;VQSLOD=4.9235;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,36:35:96.33:1855,96,0	1/1:0,19:19:51.17:985,51,0	0/0:15,0:15:45.15:0,45,668	0/0:27,0:27:75.24:0,75,1081	1/1:3,25:28:75.20:1410,75,0	1/1:0,33:33:81.28:1565,81,0	1/1:2,29:31:69.24:1315,69,0	1/1:1,37:38:99:2105,111,0	1/1:1,30:30:75.26:1444,75,0	1/1:2,31:33:96.33:1854,96,0	1/1:0,21:21:60.21:1148,60,0	1/1:1,23:27:66.23:1266,66,0	1/1:0,18:18:48.16:928,48,0	1/1:1,20:20:53.88:1037,54,0	0/0:29,0:29:81.27:0,81,1240	1/1:0,32:33:81.28:1565,81,0	1/1:0,36:36:99:1912,99,0	1/1:0,30:30:69.24:1333,69,0	1/1:1,21:22:66.22:1183,66,0	1/1:0,30:30:90.05:1655,90,0	1/1:0,33:33:72.25:1391,72,0	1/1:0,23:25:60.21:1159,60,0	1/1:0,21:21:57.20:1101,57,0	1/1:1,26:27:72.25:1391,72,0	1/1:3,27:29:72.16:1314,72,0	1/1:0,23:23:69.22:1300,69,0	1/1:2,26:28:69.24:1333,69,0	1/1:0,8:8:24.08:463,24,0
chr10	20286383	.	GA	G	821.70	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.059;DP=664;FS=0.664;HRun=7;HaplotypeScore=85.1952;InbreedingCoeff=0.9940;MQ=80.63;MQ0=0;MQRankSum=-0.334;QD=24.90;ReadPosRankSum=-5.352;VQSLOD=1.1967;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:63.16:0,63,772	0/0:16,0:16:48.14:0,48,580	0/0:16,0:15:19.68:0,20,300	0/0:19,0:19:45.08:0,45,495	0/0:29,0:29:78.24:0,78,970	0/0:30,0:30:84.27:0,84,1057	0/0:27,0:27:75.21:0,75,917	1/1:2,31:33:93.14:917,93,0	0/0:14,0:14:33.11:0,33,415	0/0:26,0:26:72.20:0,72,882	0/0:16,0:16:45.14:0,45,566	0/0:22,0:22:66.20:0,66,819	0/0:27,0:27:78.25:0,78,979	0/0:25,0:25:72.19:0,72,866	0/0:32,0:32:90.28:0,90,1121	0/0:19,0:19:57.16:0,57,692	0/0:21,0:21:57.18:0,57,717	0/0:16,0:16:39.08:0,39,473	0/0:21,0:21:63.19:0,63,780	0/0:39,0:39:99:0,114,1423	0/0:20,0:20:60.17:0,60,730	0/0:26,0:26:78.25:0,78,981	0/0:30,0:30:81.26:0,81,1019	0/0:18,0:18:51.15:0,51,629	0/0:28,0:28:78.24:0,78,971	0/0:35,0:35:99:0,102,1283	0/0:20,0:20:54.16:0,54,666	0/0:14,0:14:36.09:0,36,426
chr10	20287494	.	TATTCATTC	T	10470.77	PASS	AB=0.684;AC=31;AF=0.554;AN=56;BaseQRankSum=13.305;DP=683;FS=3.634;HRun=0;HaplotypeScore=182.2120;InbreedingCoeff=0.8704;MQ=66.02;MQ0=1;MQRankSum=-13.546;QD=28.61;ReadPosRankSum=-3.581;VQSLOD=4.0945;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:30:72.25:0,72,2758	0/0:7,0:7:15.05:0,15,621	0/0:16,0:15:5.23:0,5,119	0/0:18,0:15:10.27:0,10,283	0/0:33,0:33:57.18:0,57,2070	1/1:4,16:20:36.12:913,36,0	1/1:11,17:28:33.03:704,33,0	0/0:17,0:27:41.99:0,42,431	0/0:20,0:20:48.16:0,48,1902	1/1:9,15:24:45.10:959,45,0	1/1:14,16:30:30.06:588,30,0	1/1:13,16:29:35.83:857,36,0	1/1:9,13:23:33.11:815,33,0	1/1:7,16:23:33.11:837,33,0	0/0:37,0:37:84.29:0,84,3024	1/1:5,15:20:39.13:989,39,0	1/1:8,8:17:12:193,12,0	0/1:7,6:13:18.78:325,0,19	1/1:12,6:15:15.05:380,15,0	1/1:14,22:36:60.03:1272,60,0	1/1:12,7:19:3.01:76,3,0	1/1:9,18:27:40.69:798,41,0	1/1:12,12:24:23.91:385,24,0	1/1:7,8:15:15.05:380,15,0	0/0:34,0:34:66.23:0,66,2504	0/0:31,0:31:72.24:0,72,2747	0/0:40,0:40:78.24:0,78,2787	0/0:24,0:24:42.12:0,42,1558
chr10	20287689	.	C	CCA	24580.66	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-4.603;DP=759;FS=1.259;HRun=0;HaplotypeScore=117.4343;InbreedingCoeff=0.9988;MQ=79.33;MQ0=0;MQRankSum=-4.926;QD=47.82;ReadPosRankSum=1.993;VQSLOD=5.6250;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,126,1807	0/0:6,0:6:18.06:0,18,264	0/0:26,0:26:78.26:0,78,1120	0/0:16,0:16:45.15:0,45,630	0/0:26,0:26:78.24:0,78,1110	1/1:2,25:27:72.25:1334,72,0	1/1:1,29:30:72.25:1348,72,0	1/1:5,36:42:99:2062,117,0	1/1:1,24:27:72.25:1348,72,0	1/1:1,28:30:84.25:1538,84,0	1/1:1,30:32:78.27:1461,78,0	1/1:1,28:29:60.21:1123,60,0	1/1:1,35:36:99:1852,99,0	1/1:0,22:22:63.22:1177,63,0	0/0:32,0:32:93.30:0,93,1345	1/1:1,27:28:78.01:1459,78,0	1/1:1,25:26:63.22:1179,63,0	1/1:2,15:17:48.16:884,48,0	1/1:2,20:22:63.17:1118,63,0	1/1:0,26:27:72.24:1306,72,0	1/1:2,35:37:87.30:1629,87,0	1/1:2,25:27:63.22:1179,63,0	1/1:1,24:25:66.23:1236,66,0	1/1:1,29:30:72.25:1348,72,0	0/0:29,0:29:84.21:0,84,1138	0/0:23,0:23:63.19:0,63,891	0/0:31,0:31:87.27:0,87,1242	0/0:14,0:14:42.14:0,42,616
chr10	20290846	.	A	AT	639.43	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-4.850;DP=740;FS=1.933;HRun=2;HaplotypeScore=69.2065;InbreedingCoeff=0.9986;MQ=89.94;MQ0=0;MQRankSum=-3.427;QD=33.65;ReadPosRankSum=2.327;VQSLOD=4.0551;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,144,1736	0/0:14,0:14:36.11:0,36,446	0/0:31,0:31:72.24:0,72,976	0/0:33,0:33:87.19:0,87,1027	0/0:21,0:21:57.18:0,57,705	0/0:25,0:25:75.24:0,75,929	0/0:26,0:26:78.25:0,78,967	0/0:33,0:33:90.27:0,90,1104	1/1:1,18:19:51.17:734,51,0	0/0:27,0:27:78.24:0,78,967	0/0:9,0:9:27.08:0,27,334	0/0:27,0:27:81.25:0,81,1004	0/0:33,0:33:93.29:0,93,1151	0/0:33,0:33:99:0,99,1211	0/0:23,0:23:69.21:0,69,849	0/0:39,0:39:99:0,114,1399	0/0:36,0:36:99:0,108,1308	0/0:22,0:22:66.21:0,66,817	0/0:24,0:24:69.21:0,69,842	0/0:14,0:14:42.13:0,42,518	0/0:46,0:46:99:0,132,1616	0/0:16,0:16:45.14:0,45,555	0/0:20,0:20:57.18:0,57,705	0/0:34,0:34:93.29:0,93,1153	0/0:20,0:20:57.18:0,57,703	0/0:19,0:19:57.11:0,57,664	0/0:34,0:34:99:0,102,1262	0/0:11,0:11:33.10:0,33,406
chr10	20291819	.	AT	A	8841.60	PASS	AB=1.000;AC=37;AF=0.661;AN=56;BaseQRankSum=-3.134;DP=754;FS=0.654;HRun=11;HaplotypeScore=91.4347;InbreedingCoeff=0.9063;MQ=74.40;MQ0=1;MQRankSum=-0.737;QD=16.97;ReadPosRankSum=2.951;VQSLOD=5.5594;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,2:40:76.01:0,76,965	0/0:7,0:8:20.86:0,21,192	0/0:14,0:12:14.70:0,15,133	0/1:14,0:14:5.28:5,0,106	0/0:47,2:49:88.93:0,89,1308	1/1:4,18:22:50.87:413,51,0	1/1:4,20:25:52.97:425,53,0	1/1:8,0:44:59.41:185,59,0	1/1:4,13:17:29.94:246,30,0	1/1:6,31:37:92.84:760,93,0	1/1:4,26:30:77.85:634,78,0	1/1:2,28:30:48.92:609,49,0	1/1:4,22:26:59.91:493,60,0	1/1:5,28:33:59.85:641,60,0	0/0:26,0:26:63.15:0,63,663	1/1:5,24:29:4.95:453,5,0	1/1:3,27:30:71.90:591,72,0	1/1:5,15:20:44.93:369,45,0	1/1:8,18:26:24.85:400,25,0	1/1:5,16:21:44.75:354,45,0	1/1:4,21:25:53.93:443,54,0	1/1:2,26:28:74.90:615,75,0	1/1:8,26:34:76.26:621,76,0	1/1:3,27:30:71.83:584,72,0	0/0:24,0:24:62.35:0,62,637	0/0:30,0:30:63.39:0,63,666	0/0:27,0:27:63.07:0,63,635	0/0:14,1:15:8.39:0,8,274
chr10	20293181	.	A	AGTGT	5811.31	PASS	AB=0.934;AC=46;AF=0.885;AN=52;BaseQRankSum=-4.160;DP=795;FS=6.254;HRun=0;HaplotypeScore=188.2429;InbreedingCoeff=0.2652;MQ=64.59;MQ0=12;MQRankSum=1.307;QD=8.46;ReadPosRankSum=-2.355;VQSLOD=3.4922;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:34,0:33:15.03:214,15,0	1/1:14,0:14:5.07:119,5,0	./.	0/1:32,0:15:0:0,0,0	1/1:24,0:25:8.87:147,9,0	1/1:20,6:29:11.46:223,11,0	1/1:18,4:21:4.83:75,5,0	./.	0/0:17,0:29:14.78:0,15,80	1/1:23,6:30:24.95:445,25,0	1/1:18,0:17:9.03:195,9,0	1/1:18,7:29:27.09:619,27,0	1/1:18,9:30:12:212,12,0	1/1:14,9:25:23.82:505,24,0	0/1:18,0:31:7.69:8,0,350	1/1:18,13:32:21.07:494,21,0	1/1:21,9:34:9.03:215,9,0	1/1:23,1:23:18.03:262,18,0	0/1:19,0:17:73.75:100,0,74	1/1:10,6:21:11.78:224,12,0	1/1:51,0:51:37.95:537,38,0	1/1:20,10:37:5.75:83,6,0	1/1:14,6:22:12.04:260,12,0	0/1:23,11:36:6.65:267,0,7	1/1:18,0:28:17.78:203,18,0	1/1:32,0:32:24.43:251,24,0	1/1:7,0:15:6.02:104,6,0	1/1:15,0:15:5.99:49,6,0
chr10	20296704	.	GCCGCGCGGAGC	G	1674.37	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.639;DP=753;FS=0.000;HRun=0;HaplotypeScore=239.7732;InbreedingCoeff=0.8509;MQ=84.40;MQ0=0;MQRankSum=-7.122;QD=76.11;ReadPosRankSum=1.977;VQSLOD=2.9525;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:56:99:0,157,8292	0/0:20,0:20:60.21:0,60,3269	0/0:23,0:23:56.56:0,57,1957	0/0:26,0:26:57.58:0,58,2801	0/0:26,0:26:69.24:0,69,3774	0/0:27,0:27:75.26:0,75,3939	0/0:25,0:25:72.23:0,72,3912	0/0:26,0:26:75.21:0,75,3596	1/1:4,18:22:51.17:1769,51,0	0/0:36,0:36:93.31:0,93,4548	0/0:21,0:21:57.20:0,57,3025	0/0:34,0:34:96.32:0,96,4871	0/0:17,0:17:48.16:0,48,2618	0/0:31,0:31:90.31:0,90,4854	0/0:38,0:38:96.28:0,96,4335	0/0:34,0:34:96.29:0,96,5102	0/0:38,0:38:99:0,108,5646	0/0:21,0:21:57.20:0,57,3033	0/0:21,0:21:60.21:0,60,3255	0/0:28,0:28:84.29:0,84,4519	0/0:41,0:41:99:0,120,6120	0/0:16,0:16:45.15:0,45,2383	0/0:17,0:17:51.17:0,51,2735	0/0:29,0:29:78.27:0,78,4087	0/0:33,0:33:96.33:0,96,4940	0/0:23,0:23:60.20:0,60,3144	0/0:23,0:23:66.23:0,66,3414	0/0:1,0:1:3.01:0,3,170
chr10	20297011	.	TTTG	T	6580.22	PASS	AB=0.538;AC=13;AF=0.232;AN=56;BaseQRankSum=14.422;DP=731;FS=6.855;HRun=0;HaplotypeScore=104.9360;InbreedingCoeff=0.8990;MQ=76.45;MQ0=0;MQRankSum=-4.166;QD=41.13;ReadPosRankSum=2.961;VQSLOD=5.8842;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,31:33:69.24:1172,69,0	1/1:2,14:16:39.06:665,39,0	0/0:23,0:23:69.23:0,69,1401	0/0:17,0:17:47.83:0,48,985	1/1:0,20:20:48.16:818,48,0	0/0:25,0:25:75.26:0,75,1725	0/0:23,0:23:66.21:0,66,1414	0/0:32,0:32:96.33:0,96,2192	0/0:24,0:24:69.24:0,69,1586	0/0:36,0:36:96.32:0,96,2093	0/0:26,0:26:75.26:0,75,1724	0/0:25,0:25:75.26:0,75,1672	0/0:38,0:38:99:0,114,2625	0/0:20,0:20:57.17:0,57,1253	0/0:25,0:25:75.23:0,75,1641	0/0:27,0:27:81.24:0,81,1736	0/0:38,0:38:99:0,111,2482	0/0:27,0:27:81.28:0,81,1828	0/0:24,0:24:69.23:0,69,1537	0/0:30,0:30:90.30:0,90,2011	0/0:24,0:24:69.20:0,69,1493	0/0:22,0:22:60.21:0,60,1380	0/0:31,0:31:93.30:0,93,2072	0/0:34,0:34:99:0,102,2241	1/1:2,30:32:78.27:1330,78,0	0/1:3,18:21:99:806,0,130	1/1:0,31:31:84.18:1432,84,0	1/1:0,7:7:21.07:358,21,0
chr10	20298388	.	G	GA	961.84	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-7.039;DP=685;FS=1.494;HRun=6;HaplotypeScore=67.3517;InbreedingCoeff=0.9838;MQ=70.06;MQ0=4;MQRankSum=-0.375;QD=27.48;ReadPosRankSum=-4.869;VQSLOD=1.7233;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:81.16:0,81,816	0/0:16,0:16:42.05:0,42,418	0/0:38,0:25:47.71:0,48,504	0/0:27,0:18:15.51:0,16,146	0/0:29,0:29:87.15:0,87,866	0/0:25,0:25:75.17:0,75,765	0/0:19,0:19:45.09:0,45,459	1/1:7,28:35:84.27:1057,84,0	0/0:19,0:19:54.12:0,54,551	0/0:27,0:27:78.17:0,78,791	0/0:28,0:28:72.14:0,72,728	0/0:25,0:25:69.15:0,69,704	0/0:22,0:22:60.13:0,60,612	0/0:30,0:30:90.20:0,90,917	0/0:25,0:25:72.15:0,72,728	0/0:26,0:26:75.17:0,75,765	0/0:31,0:31:90.19:0,90,911	0/0:22,0:22:57.12:0,57,581	0/0:20,0:20:47.88:0,48,484	0/0:31,0:31:93.21:0,93,949	0/0:9,0:9:24.05:0,24,244	0/0:16,0:16:42.10:0,42,428	0/0:19,0:19:54.12:0,54,551	0/0:13,0:13:36.08:0,36,366	0/0:32,0:32:90.19:0,90,912	0/0:31,0:31:78.16:0,78,789	0/0:26,0:26:72.16:0,72,734	0/0:14,0:14:42.07:0,42,419
chr10	20300227	.	AGTGTGTGTGT	A	1562.02	PASS	AB=0.866;AC=21;AF=0.457;AN=46;BaseQRankSum=1.523;DP=569;FS=5.756;HRun=0;HaplotypeScore=159.8646;InbreedingCoeff=0.4084;MQ=75.23;MQ0=16;MQRankSum=-3.040;QD=6.79;ReadPosRankSum=1.987;VQSLOD=1.7316;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:25:3.01:0,3,147	0/0:10,0:9:12.04:0,12,466	./.	./.	0/0:23,0:23:14.96:0,15,550	1/1:12,0:12:3.01:39,3,0	./.	0/0:24,0:22:10.83:0,11,112	0/1:11,0:15:65.61:66,0,95	0/0:24,0:23:0.47:0,0,1	./.	1/1:14,3:18:12.04:331,12,0	1/1:14,0:14:3:69,3,0	1/1:17,5:22:5.69:97,6,0	0/0:16,0:18:14.70:0,15,330	1/1:17,8:26:23.87:611,24,0	1/1:21,4:25:3.01:88,3,0	0/1:20,1:22:38.30:146,0,38	1/1:20,0:19:3.01:54,3,0	1/1:14,0:14:3.01:51,3,0	0/0:29,0:27:2.99:0,3,24	0/1:22,2:25:14.91:98,0,15	./.	1/1:17,0:15:3.01:67,3,0	0/0:18,0:18:11.32:0,11,557	0/0:25,0:23:33.11:0,33,949	0/0:9,0:17:13.60:0,14,303	0/0:4,0:4:6.02:0,6,145
chr10	20300680	.	G	GC	2496.87	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-1.301;DP=679;FS=1.695;HRun=0;HaplotypeScore=67.8473;InbreedingCoeff=0.9998;MQ=91.55;MQ0=1;MQRankSum=-1.044;QD=42.32;ReadPosRankSum=-1.977;VQSLOD=3.4870;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:99:0,99,1343	0/0:11,0:11:33.11:0,33,461	0/0:31,0:31:87.20:0,87,1099	0/0:24,0:24:71.46:0,71,898	0/0:22,0:22:66.22:0,66,922	0/0:27,0:27:78.24:0,78,1072	0/0:16,0:16:48.13:0,48,636	1/1:0,35:35:99:1564,102,0	0/0:19,0:19:57.18:0,57,780	0/0:18,0:18:54.18:0,54,742	0/0:19,0:19:57.19:0,57,796	0/0:22,0:22:63.21:0,63,880	0/0:19,0:19:54.18:0,54,754	0/0:24,0:24:72.24:0,72,1005	1/1:0,24:24:66.23:1055,66,0	0/0:26,0:26:78.26:0,78,1090	0/0:39,0:39:99:0,105,1425	0/0:24,0:24:72.22:0,72,989	0/0:15,0:15:45.15:0,45,629	0/0:27,0:27:81.23:0,81,1109	0/0:38,0:36:99:0,108,1494	0/0:19,0:19:57.18:0,57,778	0/0:21,0:21:63.19:0,63,854	0/0:21,0:21:63.19:0,63,860	0/0:21,0:21:63.20:0,63,859	0/0:31,0:31:87.28:0,87,1199	0/0:38,0:38:99:0,108,1510	0/0:15,0:15:42.14:0,42,587
chr10	20303590	.	CGTGTGTGTGT	C	5880.81	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=5.750;DP=658;FS=5.304;HRun=0;HaplotypeScore=206.2423;InbreedingCoeff=0.8560;MQ=61.52;MQ0=6;MQRankSum=-5.837;QD=28.00;ReadPosRankSum=2.650;VQSLOD=4.2179;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:21,10:32:21.07:615,21,0	1/1:7,9:16:18.06:545,18,0	0/1:38,0:20:4.75:5,0,399	0/0:37,0:21:18.05:0,18,490	1/1:8,12:21:18.06:491,18,0	0/0:27,0:30:12.04:0,12,481	0/0:22,0:21:12.04:0,12,563	0/0:19,0:19:26.92:0,27,822	1/1:9,12:21:24.08:727,24,0	0/0:32,0:36:69.23:0,69,2717	0/0:14,0:14:9.48:0,9,261	0/0:26,0:25:15.52:0,16,643	0/0:26,0:26:30:0,30,822	0/0:22,0:27:17.57:0,18,723	0/0:19,0:18:15.04:0,15,469	0/0:18,0:21:17.29:0,17,586	0/0:27,0:32:13.40:0,13,465	0/0:14,0:13:18.06:0,18,804	0/0:18,0:17:24.08:0,24,784	0/0:15,0:15:6.02:0,6,252	0/0:29,0:29:27.50:0,28,900	0/0:17,0:17:9.03:0,9,400	0/0:15,0:14:6.02:0,6,291	0/0:29,0:30:18.09:0,18,703	1/1:7,16:23:27.09:810,27,0	1/1:11,17:29:57.13:1508,57,0	1/1:9,10:19:18.06:545,18,0	1/1:4,7:11:21.07:636,21,0
chr10	20304205	.	GGGT	G	1137.83	PASS	AB=0.966;AC=12;AF=0.214;AN=56;BaseQRankSum=4.450;DP=291;FS=13.061;HRun=0;HaplotypeScore=64.7683;InbreedingCoeff=0.4545;MQ=84.59;MQ0=0;MQRankSum=-0.440;QD=9.03;ReadPosRankSum=11.658;VQSLOD=0.1232;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:25,2:27:12.94:341,13,0	1/1:4,0:4:2.04:27,2,0	0/0:17,0:16:48.05:0,48,693	0/0:20,0:16:35:0,35,395	0/1:14,0:14:24.82:85,0,25	0/0:4,0:4:12.01:0,12,152	0/0:5,0:5:9.50:0,10,142	0/0:25,0:25:37.53:0,38,235	0/1:16,0:16:5.54:163,0,6	0/0:6,0:6:15.05:0,15,236	0/0:1,0:1:2.68:0,3,11	0/0:10,0:10:21.94:0,22,336	0/0:3,0:3:9.03:0,9,148	0/0:10,0:9:24.02:0,24,307	0/0:16,0:16:47.52:0,48,572	0/0:6,0:6:12.01:0,12,139	0/0:10,0:10:24.82:0,25,295	0/0:5,0:5:12.04:0,12,200	0/0:5,0:5:12.02:0,12,145	0/0:4,0:4:8.99:0,9,75	0/0:10,0:10:24.03:0,24,314	0/0:2,0:2:5.94:0,6,43	0/0:3,0:3:5.65:0,6,43	0/0:3,0:3:9.01:0,9,115	0/1:14,1:15:6.81:137,0,7	0/1:23,2:25:77.84:209,0,78	1/1:20,1:21:28.90:270,29,0	1/1:4,0:4:11.60:65,12,0
chr10	20304432	.	G	GAAAA	5597.95	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-1.923;DP=519;FS=7.817;HRun=9;HaplotypeScore=94.0347;InbreedingCoeff=0.9889;MQ=77.88;MQ0=0;MQRankSum=-4.628;QD=32.74;ReadPosRankSum=-3.613;VQSLOD=2.2532;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,28:38:57.19:1242,57,0	1/1:4,1:5:12:192,12,0	0/0:23,0:20:35.10:0,35,383	0/0:31,0:27:31.38:0,31,399	1/1:7,14:25:53.83:709,54,0	0/0:14,0:15:40.33:0,40,533	0/0:29,0:29:69.06:0,69,833	1/1:6,2:21:41.50:606,42,0	1/1:3,4:8:18.06:319,18,0	0/0:11,0:11:33.11:0,33,483	0/0:10,0:10:27.04:0,27,358	0/0:14,0:14:42.01:0,42,585	0/0:12,0:12:33.07:0,33,464	0/0:22,0:21:51.08:0,51,727	0/0:21,0:21:47.22:0,47,296	0/0:21,0:21:60.18:0,60,859	0/0:19,0:19:57.17:0,57,809	0/0:14,0:14:42.10:0,42,573	0/0:28,0:28:67.99:0,68,951	0/0:18,0:18:42.03:0,42,555	0/0:11,0:11:30.02:0,30,394	0/0:10,0:10:27.07:0,27,376	0/0:13,0:13:30.03:0,30,399	0/0:24,0:24:69.15:0,69,948	1/1:5,10:16:15.05:347,15,0	1/1:16,12:31:22.24:1173,22,0	1/1:3,13:17:21.07:505,21,0	1/1:2,8:10:21.07:505,21,0
chr10	20304438	.	A	AG	565.67	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-3.314;DP=531;FS=3.993;HRun=0;HaplotypeScore=77.1728;InbreedingCoeff=0.9696;MQ=72.53;MQ0=0;MQRankSum=1.115;QD=20.95;ReadPosRankSum=0.859;VQSLOD=4.8722;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:70.01:0,70,447	0/0:5,0:5:14.83:0,15,103	0/0:26,0:20:32.80:0,33,486	0/0:28,0:23:27.47:0,27,473	0/0:24,0:24:47.42:0,47,368	0/0:15,0:15:34.15:0,34,537	0/0:25,0:25:75.21:0,75,997	0/0:28,0:28:50.06:0,50,319	0/0:7,0:7:17.40:0,17,110	0/0:11,0:11:33.11:0,33,459	0/0:11,0:11:30.09:0,30,405	0/0:17,0:17:51.15:0,51,667	0/0:12,0:12:36.11:0,36,487	0/0:21,0:20:60.18:0,60,796	1/1:7,20:27:28.88:660,29,0	0/0:22,0:22:66.20:0,66,891	0/0:19,0:19:57.18:0,57,780	0/0:16,0:16:48.12:0,48,633	0/0:26,0:26:78.23:0,78,1049	0/0:17,0:17:50.98:0,51,647	0/0:11,0:11:33.10:0,33,442	0/0:15,0:15:42.04:0,42,502	0/0:14,0:14:39.09:0,39,483	0/0:25,0:25:75.19:0,75,1007	0/0:18,0:18:33.72:0,34,250	0/0:28,0:28:74.49:0,74,489	0/0:17,0:17:28.78:0,29,178	0/0:10,0:10:26.32:0,26,165
chr10	20304698	.	A	AAGCAG	14819.57	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-11.310;DP=717;FS=3.274;HRun=0;HaplotypeScore=122.8573;InbreedingCoeff=0.9979;MQ=84.42;MQ0=0;MQRankSum=-4.029;QD=69.58;ReadPosRankSum=2.566;VQSLOD=6.4915;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,49:57:99:4104,141,0	1/1:3,6:9:18.06:506,18,0	0/0:19,0:19:54.14:0,54,1004	0/0:26,0:26:57.02:0,57,991	1/1:2,24:27:60.21:1765,60,0	0/0:13,0:13:36.12:0,36,750	0/0:33,0:33:93.30:0,93,1923	0/0:44,0:44:99:0,123,2469	1/1:2,13:18:45.15:1347,45,0	0/0:19,0:19:51.18:0,51,1087	0/0:12,0:12:36.12:0,36,752	0/0:28,0:28:78.27:0,78,1656	0/0:25,0:25:69.22:0,69,1432	0/0:32,0:32:84.27:0,84,1716	0/0:26,0:26:72.25:0,72,1520	0/0:14,0:14:39.13:0,39,830	0/0:31,0:31:81.28:0,81,1705	0/0:30,0:30:84.29:0,84,1790	0/0:30,0:30:84.29:0,84,1777	0/0:18,0:18:54.16:0,54,1075	0/0:41,0:41:99:0,120,2556	0/0:14,0:14:33.11:0,33,703	0/0:20,0:20:57.20:0,57,1214	0/0:29,0:29:84.29:0,84,1771	1/1:3,21:25:54.19:1651,54,0	1/1:5,27:35:96.32:2781,96,0	1/1:4,23:31:66.19:2009,66,0	1/1:0,11:10:21.07:657,21,0
chr10	20306544	.	T	TA	4007.11	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-6.498;DP=599;FS=19.266;HRun=0;HaplotypeScore=111.0880;InbreedingCoeff=0.9828;MQ=85.43;MQ0=0;MQRankSum=-1.597;QD=20.34;ReadPosRankSum=0.989;VQSLOD=3.1047;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,17:21:43.31:506,43,0	1/1:0,5:5:11.95:113,12,0	0/0:18,0:18:48.11:0,48,612	0/0:21,0:21:8.22:0,8,373	1/1:9,18:27:51.43:599,51,0	0/0:29,0:29:77.14:0,77,618	0/0:19,0:19:47.53:0,48,373	1/1:9,21:31:57.79:634,58,0	1/1:2,16:19:38.49:396,38,0	0/0:18,0:18:47.24:0,47,461	0/0:27,0:27:69.84:0,70,494	0/0:15,0:15:32.66:0,33,261	0/0:23,0:23:53.19:0,53,359	0/0:23,0:23:60.02:0,60,404	0/0:26,0:26:78.24:0,78,1060	0/0:19,0:19:53.49:0,53,387	0/0:28,0:28:68.46:0,68,552	0/0:22,0:22:63.10:0,63,438	0/0:16,0:16:44.56:0,45,366	0/0:21,0:21:54.82:0,55,319	0/0:17,0:17:44.41:0,44,306	0/0:22,0:22:54.85:0,55,357	0/0:22,0:22:53.80:0,54,361	0/0:16,0:16:39.69:0,40,286	1/1:3,17:20:29.24:308,29,0	1/1:3,29:32:37.64:701,38,0	1/1:9,24:33:22.16:530,22,0	1/1:1,8:9:19.42:221,19,0
chr10	20306545	.	T	TA	12752.82	PASS	AB=1.000;AC=51;AF=0.911;AN=56;BaseQRankSum=1.971;DP=601;FS=5.850;HRun=9;HaplotypeScore=79.1404;InbreedingCoeff=0.7651;MQ=84.82;MQ0=0;MQRankSum=-2.939;QD=22.90;ReadPosRankSum=0.791;VQSLOD=5.6860;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:20:48.13:530,48,0	1/1:4,0:4:11.98:119,12,0	0/0:16,0:17:21.82:0,22,166	0/1:21,0:21:18.40:18,0,129	1/1:27,0:27:60.11:642,60,0	1/1:7,23:30:60.16:664,60,0	1/1:5,15:20:42.06:451,42,0	1/1:31,0:32:75.39:753,75,0	1/1:20,0:20:38.91:409,39,0	1/1:5,12:17:36.08:390,36,0	1/1:4,23:27:59.96:618,60,0	1/1:3,12:15:27.05:287,27,0	1/1:2,21:23:51.12:555,51,0	1/1:3,22:25:57.15:630,57,0	0/0:27,0:27:74.95:0,75,646	1/1:1,17:19:47.96:512,48,0	1/1:5,23:28:37.08:624,37,0	1/1:3,20:23:34.12:604,34,0	1/1:4,12:17:15.95:372,16,0	1/1:1,21:22:63.05:655,63,0	1/1:1,15:16:39.11:431,39,0	1/1:2,20:22:57.09:614,57,0	1/1:3,19:22:28.10:538,28,0	1/1:2,13:15:33.01:349,33,0	1/1:19,0:19:33.04:350,33,0	1/1:30,1:31:73.36:795,73,0	1/1:33,0:33:48.88:611,49,0	1/1:9,0:9:21.06:232,21,0
chr10	20306839	.	GTC	G	1943.73	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=4.314;DP=584;FS=34.651;HRun=0;HaplotypeScore=125.9526;InbreedingCoeff=0.8817;MQ=57.23;MQ0=13;MQRankSum=-1.136;QD=13.22;ReadPosRankSum=-4.012;VQSLOD=1.3794;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:28,4:32:50.58:466,51,0	1/1:6,2:8:18:176,18,0	0/0:37,0:22:4.77:0,5,370	0/0:47,0:25:25.86:0,26,524	1/1:13,0:12:29.94:243,30,0	0/0:24,0:23:30.47:0,30,478	0/0:32,0:32:38.91:0,39,698	1/1:17,0:14:41.74:327,42,0	1/1:12,0:12:17.17:145,17,0	0/1:16,0:16:6.06:6,0,424	0/0:26,1:27:42.07:0,42,632	0/0:18,0:18:27.08:0,27,475	0/0:17,0:16:42.47:0,42,667	0/0:29,0:29:33.05:0,33,503	0/0:23,0:23:23.34:0,23,577	0/0:29,0:27:31.25:0,31,861	0/0:22,0:22:41.50:0,41,631	0/0:12,0:12:29.97:0,30,416	0/0:15,0:14:3.99:0,4,246	0/0:22,0:22:20.65:0,21,376	0/0:21,0:17:29.65:0,30,666	0/0:16,1:16:26.15:0,26,398	0/0:17,0:17:11.29:0,11,316	0/0:28,0:28:48.13:0,48,855	1/1:10,1:11:20.97:174,21,0	1/1:8,0:8:17.89:147,18,0	1/1:16,2:17:39.59:301,40,0	1/1:12,0:12:20.85:171,21,0
chr10	20306851	.	GTGTGTC	G	2121.93	PASS	AB=0.984;AC=24;AF=0.429;AN=56;BaseQRankSum=2.563;DP=571;FS=27.602;HRun=0;HaplotypeScore=165.8837;InbreedingCoeff=0.4934;MQ=49.02;MQ0=18;MQRankSum=-3.946;QD=7.63;ReadPosRankSum=-4.889;VQSLOD=-0.3339;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:31,2:33:30.73:395,31,0	1/1:8,0:8:18.02:254,18,0	0/0:18,0:8:1.56:0,2,50	0/1:34,0:14:22.64:23,0,23	1/1:12,0:11:20.95:169,21,0	0/0:26,0:25:24.92:0,25,493	0/1:28,1:28:24.75:25,0,272	1/1:15,0:12:28.13:178,28,0	1/1:16,0:15:16.83:144,17,0	0/1:20,0:19:99:123,0,233	0/1:28,0:28:2.15:2,0,409	0/0:18,0:18:31.27:0,31,710	0/0:19,0:17:33.94:0,34,587	0/0:26,2:28:21.06:0,21,596	0/0:22,0:22:29.99:0,30,298	0/0:30,0:28:42.09:0,42,939	0/0:20,0:20:2.30:0,2,331	0/1:11,0:11:11.29:11,0,252	0/1:14,1:14:79.73:80,0,332	0/0:22,0:22:2.93:0,3,109	0/0:20,0:16:25.76:0,26,551	0/0:21,0:20:25.39:0,25,382	0/0:18,0:18:5.84:0,6,160	0/0:31,0:31:45.04:0,45,659	1/1:14,1:15:29.88:238,30,0	1/1:10,0:10:22.48:160,22,0	1/1:20,3:22:39.30:395,39,0	1/1:9,0:8:11.88:123,12,0
chr10	20306853	.	GTGTC	G	2041.04	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=2.853;DP=554;FS=30.671;HRun=0;HaplotypeScore=148.9530;InbreedingCoeff=0.5519;MQ=47.49;MQ0=17;MQRankSum=-4.630;QD=8.36;ReadPosRankSum=-4.631;VQSLOD=-0.3903;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:30,1:31:38.01:402,38,0	1/1:6,2:8:18.02:209,18,0	0/0:15,0:7:1.56:0,2,50	0/1:31,0:11:20.75:26,0,21	1/1:11,0:10:20.95:169,21,0	0/0:23,0:22:24.46:0,24,376	0/0:28,1:28:5.38:0,5,237	1/1:14,0:11:28.40:186,28,0	1/1:17,0:16:16.88:164,17,0	0/1:20,0:19:99:104,0,163	0/1:27,0:27:1.72:2,0,311	0/0:19,0:18:31.13:0,31,505	0/0:18,0:16:33.43:0,33,428	0/0:27,0:27:21.06:0,21,451	0/0:12,10:22:29.97:0,30,249	0/0:30,0:28:40.45:0,40,726	0/0:18,0:18:0.04:0,0,310	0/1:11,0:11:8.40:8,0,198	0/1:15,0:14:67.44:67,0,263	0/0:22,0:22:2.93:0,3,109	0/0:19,0:15:26.55:0,27,464	0/0:21,0:20:25.70:0,26,283	0/0:17,0:17:10.74:0,11,142	0/0:30,0:30:45.88:0,46,561	1/1:16,0:16:29.89:239,30,0	1/1:10,0:10:21.99:158,22,0	1/1:24,0:22:46.31:401,46,0	1/1:9,0:8:11.89:104,12,0
chr10	20306855	.	GTC	G	1993.85	PASS	AB=1.000;AC=25;AF=0.446;AN=56;BaseQRankSum=3.574;DP=538;FS=36.296;HRun=0;HaplotypeScore=136.9433;InbreedingCoeff=0.4436;MQ=46.43;MQ0=17;MQRankSum=-2.603;QD=7.44;ReadPosRankSum=-3.850;VQSLOD=1.2521;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:31,0:31:38.67:375,39,0	1/1:8,0:8:18:175,18,0	0/0:10,0:5:1.56:0,2,50	0/1:25,0:9:21.75:25,0,22	1/1:10,0:9:20.95:169,21,0	0/0:24,0:23:21.96:0,22,260	0/0:28,0:27:1.92:0,2,206	1/1:13,0:10:28.21:188,28,0	1/1:17,0:16:22.53:178,23,0	0/1:18,0:17:99:100,0,110	0/1:27,0:27:7.78:8,0,215	0/0:19,0:18:29.14:0,29,328	0/0:18,0:16:29.84:0,30,295	0/0:27,0:27:21.06:0,21,304	0/0:21,0:21:27.44:0,27,225	0/0:30,0:28:37.90:0,38,501	0/1:18,0:18:7.41:7,0,254	0/1:11,0:11:8.40:8,0,153	0/1:15,0:14:53.39:53,0,207	0/0:22,0:22:2.93:0,3,108	0/0:19,0:15:26.47:0,26,351	0/0:22,0:21:13.66:0,14,221	0/1:16,0:16:8.12:8,0,106	0/0:30,0:30:45.88:0,46,463	1/1:16,0:16:29.89:239,30,0	1/1:5,6:11:24.69:184,25,0	1/1:23,0:21:47.44:369,47,0	1/1:9,0:8:11.92:104,12,0
chr10	20306878	.	TGAGAGAGAGA	T	2657.38	PASS	AB=0.835;AC=21;AF=0.404;AN=52;BaseQRankSum=-1.044;DP=436;FS=29.317;HRun=0;HaplotypeScore=177.0220;InbreedingCoeff=0.1250;MQ=40.25;MQ0=13;MQRankSum=-0.883;QD=9.66;ReadPosRankSum=-1.402;VQSLOD=0.9873;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:27.80:0,28,1368	0/0:6,0:6:3.01:0,3,129	./.	./.	0/0:4,0:4:6.02:0,6,244	0/1:20,2:22:8.65:165,0,9	0/0:19,2:20:3.50:0,4,17	0/0:9,0:8:12:0,12,134	0/0:13,0:12:7.38:0,7,272	1/1:10,2:13:15:381,15,0	0/1:17,2:24:26.16:283,0,26	0/1:17,0:19:7.08:353,0,7	0/1:9,2:10:63.03:92,0,63	1/1:25,1:28:2.71:88,3,0	0/0:15,0:15:12.04:0,12,355	0/1:16,0:23:56.54:130,0,57	0/1:12,0:13:9.32:152,0,9	1/1:7,0:8:3.01:82,3,0	0/1:8,0:10:11.46:141,0,11	1/1:19,1:23:13.53:425,14,0	1/1:11,0:7:3.01:62,3,0	0/1:18,1:20:6.35:270,0,6	1/1:11,4:16:3.01:47,3,0	0/1:20,2:26:16.61:147,0,17	0/0:14,0:14:21.07:0,21,804	0/0:13,0:13:36.36:0,36,1087	0/0:23,0:21:40.95:0,41,1400	0/0:10,0:9:6.91:0,7,252
chr10	20308443	.	C	CT	253.57	PASS	AB=1.000;AC=30;AF=0.833;AN=36;BaseQRankSum=0.486;DP=109;FS=14.272;HRun=0;HaplotypeScore=38.8840;InbreedingCoeff=0.3807;MQ=129.04;MQ0=5;MQRankSum=-2.052;QD=11.02;ReadPosRankSum=-3.242;VQSLOD=1.1492;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:2,0:2:0:0,0,0	./.	0/0:41,0:23:10.25:0,10,603	0/0:39,0:22:24.57:0,25,507	1/1:1,0:1:0.47:1,0,0	1/1:1,0:1:3.01:42,3,0	1/1:1,0:1:0.47:1,0,0	./.	./.	1/1:1,0:1:0.47:1,0,0	1/1:0,1:1:3.01:31,3,0	1/1:2,0:2:3.48:41,3,0	./.	1/1:1,0:1:3.01:40,3,0	./.	1/1:2,0:2:3.48:43,3,0	1/1:1,0:1:2.97:20,3,0	0/1:1,0:1:0:0,0,0	./.	1/1:0,1:1:3.01:34,3,0	./.	1/1:1,3:4:6.49:70,6,0	1/1:1,0:1:0.47:1,0,0	./.	./.	1/1:2,0:1:0.47:1,0,0	1/1:1,0:1:3:26,3,0	./.
chr10	20315991	.	GA	G	10727.31	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-3.860;DP=563;FS=4.612;HRun=10;HaplotypeScore=65.1813;InbreedingCoeff=0.9741;MQ=75.33;MQ0=0;MQRankSum=-4.951;QD=20.47;ReadPosRankSum=3.508;VQSLOD=5.9403;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,27:28:71.97:625,72,0	1/1:0,9:9:24:208,24,0	0/0:23,0:17:12.92:0,13,177	0/0:16,0:13:20.30:0,20,179	1/1:1,15:16:41.98:365,42,0	1/1:2,21:23:29.81:488,30,0	1/1:2,18:20:47.98:417,48,0	1/1:5,18:23:20.79:410,21,0	1/1:1,0:24:38.70:114,39,0	1/1:2,16:18:44.97:388,45,0	1/1:1,29:30:80.97:701,81,0	1/1:3,17:20:41.99:365,42,0	1/1:2,23:25:35.81:540,36,0	1/1:5,19:24:41.99:365,42,0	1/1:2,21:23:56.98:495,57,0	1/1:4,18:22:50.99:443,51,0	1/1:4,25:29:74.97:651,75,0	1/1:3,21:24:56.98:495,57,0	1/1:2,14:16:41.96:358,42,0	1/1:2,18:20:50.98:443,51,0	1/1:3,7:10:20.99:182,21,0	1/1:1,13:14:38.99:339,39,0	1/1:2,23:25:65.99:573,66,0	1/1:1,15:16:35.99:313,36,0	1/1:0,18:18:53.99:469,54,0	1/1:1,19:20:53.95:464,54,0	1/1:3,14:16:41.97:365,42,0	1/1:1,9:10:17.99:156,18,0
chr10	20317432	.	G	GA	4215.56	PASS	AB=0.903;AC=39;AF=0.696;AN=56;BaseQRankSum=7.147;DP=527;FS=4.265;HRun=13;HaplotypeScore=87.8844;InbreedingCoeff=0.5415;MQ=78.33;MQ0=1;MQRankSum=1.043;QD=10.41;ReadPosRankSum=0.773;VQSLOD=4.5451;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,2:35:29.48:0,29,475	0/0:5,0:8:18:0,18,100	0/1:34,0:24:8.23:8,0,64	0/0:16,0:12:7.04:0,7,38	0/1:14,2:17:7.74:8,0,228	1/1:3,6:11:10.51:155,11,0	1/1:7,12:20:29.97:268,30,0	0/0:25,0:27:54.48:0,54,355	1/1:11,1:16:32.30:226,32,0	1/1:10,10:20:32.93:288,33,0	1/1:10,8:19:14.06:275,14,0	0/1:9,3:12:15.16:19,0,15	1/1:6,17:24:35.88:319,36,0	1/1:3,6:9:11.23:90,11,0	1/1:18,0:18:42.92:216,43,0	1/1:5,9:14:9.24:155,9,0	1/1:5,23:28:43.38:559,43,0	1/1:4,13:18:15.91:240,16,0	1/1:8,10:18:22.05:282,22,0	1/1:5,17:26:43.13:417,43,0	1/1:6,7:14:10.91:123,11,0	1/1:6,8:17:19.13:179,19,0	1/1:13,3:16:1.86:142,2,0	1/1:3,9:14:26.71:223,27,0	0/1:17,2:21:7.01:7,0,230	0/1:16,2:19:11.98:12,0,209	0/0:25,1:28:36.56:0,37,383	0/0:6,0:8:7.89:0,8,47
chr10	20317441	.	A	AC	488.50	PASS	AB=1.000;AC=4;AF=0.071;AN=56;BaseQRankSum=1.172;DP=536;FS=0.000;HRun=0;HaplotypeScore=95.5950;InbreedingCoeff=0.4833;MQ=80.18;MQ0=1;MQRankSum=-0.341;QD=8.14;ReadPosRankSum=3.371;VQSLOD=3.2142;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:96.67:0,97,1224	0/0:10,0:10:29.97:0,30,307	0/0:35,0:24:29.37:0,29,302	0/0:17,0:13:16.18:0,16,124	0/0:21,0:21:56.15:0,56,678	0/0:15,0:15:25.06:0,25,224	0/0:17,0:17:10.40:0,10,82	0/0:28,0:28:78.12:0,78,943	0/0:14,0:14:29.16:0,29,188	0/0:19,0:19:15.17:0,15,182	0/0:23,0:23:30.77:0,31,268	0/0:6,0:6:8.99:0,9,95	0/0:23,0:23:10.46:0,10,100	0/0:10,0:10:11.43:0,11,86	1/1:0,19:19:45.15:582,45,0	0/0:12,0:12:8.67:0,9,90	0/1:28,0:28:1.89:2,0,81	0/0:19,0:19:15.78:0,16,159	0/0:18,0:18:16.76:0,17,214	0/0:29,0:29:36.49:0,36,339	0/0:14,0:14:14.91:0,15,131	0/0:17,0:17:35.94:0,36,263	0/0:17,0:17:31.10:0,31,247	0/1:13,0:13:2.56:3,0,26	0/0:22,0:22:59.30:0,59,719	0/0:17,0:17:45.10:0,45,577	0/0:28,0:28:80.76:0,81,1000	0/0:9,0:9:23.97:0,24,227
chr10	20319336	.	A	AAAGGTGATCCATCTTCCCCCAAGTTTA	5304.62	PASS	AB=0.693;AC=30;AF=0.938;AN=32;BaseQRankSum=1.061;DP=41;FS=9.294;HRun=0;HaplotypeScore=98.2128;InbreedingCoeff=-0.1994;MQ=123.43;MQ0=0;MQRankSum=-1.866;QD=143.37;ReadPosRankSum=2.086;VQSLOD=4.0154;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,0:2:3.01:44,3,0	./.	0/1:3,1:7:10.03:1160,0,10	0/1:4,0:6:6.33:623,0,6	./.	1/1:3,0:3:9.03:500,9,0	./.	./.	./.	1/1:1,0:1:3.01:176,3,0	./.	1/1:1,0:1:3.01:165,3,0	./.	1/1:2,0:2:6.02:282,6,0	1/1:3,0:3:9.03:504,9,0	./.	1/1:1,0:1:3.01:149,3,0	./.	./.	1/1:1,0:1:3.01:109,3,0	./.	1/1:1,0:1:3.01:152,3,0	1/1:3,0:3:9.03:558,9,0	1/1:2,0:2:6.02:226,6,0	1/1:1,0:1:3.01:159,3,0	./.	1/1:1,0:1:3.01:157,3,0	1/1:2,0:2:6.02:339,6,0
chr10	20322825	.	A	AG	1403.82	PASS	AB=0.892;AC=19;AF=0.339;AN=56;BaseQRankSum=-3.476;DP=432;FS=14.251;HRun=0;HaplotypeScore=82.4008;InbreedingCoeff=-0.3696;MQ=61.27;MQ0=0;MQRankSum=5.174;QD=5.82;ReadPosRankSum=-2.848;VQSLOD=1.7885;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:32:85.56:0,86,521	0/0:9,0:9:26.79:0,27,194	0/0:21,0:17:8.41:0,8,251	0/0:16,0:10:14.96:0,15,166	0/0:23,0:26:71.71:0,72,447	0/1:21,0:21:99:136,0,171	0/1:5,7:12:9.48:9,0,73	0/1:13,8:20:55.32:135,0,55	0/0:11,0:11:30.25:0,30,253	0/1:15,0:15:77.95:143,0,78	0/1:11,7:19:47.43:47,0,139	0/1:9,0:9:47.67:71,0,48	0/1:3,8:11:14.06:14,0,30	0/1:12,0:12:66.06:83,0,66	0/1:21,1:21:99:135,0,144	0/1:8,0:8:35:71,0,35	0/1:17,0:17:66.51:173,0,67	0/1:6,0:6:29.94:33,0,30	0/1:15,0:15:57.16:57,0,158	0/1:19,0:18:30.78:202,0,31	0/1:5,0:5:14.33:33,0,14	0/1:10,0:10:20.10:123,0,20	0/1:3,9:11:27.99:38,0,28	1/1:7,0:7:8.03:62,8,0	0/0:19,0:20:46.02:0,46,300	0/0:26,0:25:25.93:0,26,313	0/0:23,0:25:73.64:0,74,497	0/0:5,0:5:9.42:0,9,69
chr10	20322830	.	A	AC	967.47	PASS	AB=0.933;AC=7;AF=0.125;AN=56;BaseQRankSum=4.026;DP=426;FS=0.476;HRun=0;HaplotypeScore=88.5441;InbreedingCoeff=-0.1371;MQ=63.29;MQ0=0;MQRankSum=-2.875;QD=6.58;ReadPosRankSum=2.826;VQSLOD=3.4919;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:31,1:32:99:198,0,117	0/1:11,0:11:16.73:131,0,17	0/0:24,0:20:43.92:0,44,352	0/0:15,0:9:11.79:0,12,115	0/1:28,0:29:99:222,0,143	0/0:20,0:20:59.26:0,59,405	0/0:11,0:11:16.13:0,16,101	0/0:22,0:21:40.14:0,40,287	0/0:11,0:11:29.81:0,30,237	0/0:15,0:15:31.31:0,31,218	0/0:19,0:19:32.06:0,32,229	0/0:9,0:9:23.62:0,24,151	0/0:9,0:9:8.88:0,9,59	0/0:11,0:11:25.17:0,25,160	0/0:21,0:20:50.33:0,50,347	0/0:7,0:7:14.77:0,15,95	0/0:14,0:14:36.73:0,37,235	0/0:7,0:7:11.82:0,12,78	0/0:17,0:17:43.44:0,43,292	0/0:15,0:14:35.32:0,35,222	0/0:4,0:4:8.90:0,9,61	0/0:10,0:10:29.45:0,29,194	0/0:11,0:10:11.30:0,11,73	0/0:7,0:7:9.61:0,10,52	0/1:19,0:19:49.61:188,0,50	0/1:9,18:27:53.68:154,0,54	0/1:23,0:23:98.08:172,0,98	0/1:5,0:5:12.82:33,0,13
chr10	20322836	.	C	CAAAAAA	4900.69	PASS	AB=1.000;AC=24;AF=0.429;AN=56;BaseQRankSum=2.070;DP=353;FS=0.437;HRun=15;HaplotypeScore=100.3216;InbreedingCoeff=0.2476;MQ=70.55;MQ0=0;MQRankSum=-5.632;QD=22.90;ReadPosRankSum=2.695;VQSLOD=2.4253;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:19,5:24:65.09:1248,65,0	1/1:10,0:10:29.75:377,30,0	0/0:23,0:19:53.62:0,54,697	0/0:16,0:12:24:0,24,319	1/1:18,4:22:62.92:924,63,0	0/1:12,0:12:40.23:40,0,412	0/1:7,0:7:2.95:3,0,189	0/0:21,0:20:41.46:0,41,504	0/1:11,0:11:56.53:59,0,57	0/0:12,0:12:36.03:0,36,443	0/0:19,0:19:3.03:0,3,409	0/1:7,0:7:51.65:52,0,171	0/1:5,0:5:20.29:20,0,51	0/1:11,0:11:46.44:46,0,205	0/1:16,0:15:60.67:61,0,250	0/0:8,0:8:21.01:0,21,217	0/1:12,0:12:99:212,0,193	0/0:12,0:12:14.13:0,14,201	0/1:17,0:17:57.43:57,0,368	0/0:10,0:9:17.82:0,18,189	0/0:7,0:7:15:0,15,155	0/0:4,0:4:9.03:0,9,135	0/0:7,0:6:18.01:0,18,193	0/1:8,0:8:28.90:29,0,58	1/1:11,1:12:36.10:558,36,0	1/1:21,0:20:39.07:461,39,0	1/1:14,2:16:47.74:665,48,0	1/1:3,0:3:8.70:89,9,0
chr10	20322966	.	G	GAC	929.87	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-5.350;DP=456;FS=0.000;HRun=0;HaplotypeScore=67.7139;InbreedingCoeff=0.8997;MQ=97.63;MQ0=0;MQRankSum=-2.682;QD=40.43;ReadPosRankSum=1.152;VQSLOD=5.2281;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:54.15:0,54,718	0/0:10,0:10:30.09:0,30,403	0/0:24,0:23:63.13:0,63,798	0/0:26,0:26:63.17:0,63,833	0/0:16,0:16:42.12:0,42,569	0/0:13,0:13:33.11:0,33,461	0/0:13,0:13:39.12:0,39,529	0/0:30,0:30:81.21:0,81,1076	0/0:19,0:19:57.15:0,57,744	0/0:8,0:8:21.07:0,21,294	0/0:6,0:6:18.02:0,18,202	0/0:20,0:20:54.17:0,54,737	0/0:12,0:12:33.11:0,33,460	0/0:13,0:13:36.12:0,36,504	1/1:0,23:23:57.20:1025,57,0	0/0:13,0:13:36.12:0,36,504	0/0:33,0:33:96.28:0,96,1319	0/0:29,0:29:78.26:0,78,1090	0/0:13,0:13:39.11:0,39,514	0/0:6,0:6:9.03:0,9,126	0/0:14,0:14:36.12:0,36,504	0/0:6,0:6:12.04:0,12,168	0/0:8,0:8:18.06:0,18,252	0/0:24,0:24:66.18:0,66,871	0/0:14,0:14:39.13:0,39,546	0/0:13,0:13:33.10:0,33,432	0/0:19,0:19:51.17:0,51,713	0/0:10,0:10:30.10:0,30,419
chr10	20323485	.	CGGGG	C	5621.39	PASS	AB=1.000;AC=52;AF=0.929;AN=56;BaseQRankSum=1.738;DP=383;FS=12.981;HRun=12;HaplotypeScore=95.2804;InbreedingCoeff=0.3229;MQ=63.85;MQ0=1;MQRankSum=-2.765;QD=15.15;ReadPosRankSum=6.301;VQSLOD=0.9524;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,13:18:24.05:363,24,0	1/1:1,3:4:9.02:124,9,0	0/1:6,0:5:2.83:5,0,3	0/0:12,0:7:6.71:0,7,240	1/1:5,8:13:8.98:136,9,0	1/1:18,0:18:21.10:239,21,0	1/1:24,0:24:14.83:230,15,0	0/1:18,0:18:23.05:240,0,23	1/1:15,0:15:21.39:232,21,0	1/1:15,0:15:16.63:211,17,0	1/1:9,0:9:6.43:90,6,0	1/1:15,0:15:29.48:255,29,0	1/1:13,0:13:17.77:206,18,0	1/1:13,0:13:24:235,24,0	1/1:14,0:14:28.07:268,28,0	1/1:11,0:11:3.37:54,3,0	1/1:25,0:25:44.94:398,45,0	1/1:14,0:14:36:323,36,0	1/1:14,0:14:20.14:183,20,0	1/1:11,0:11:12:117,12,0	1/1:19,0:19:6.86:118,7,0	1/1:13,0:13:8.14:93,8,0	1/1:13,0:13:9.39:107,9,0	1/1:6,0:6:11.99:103,12,0	1/1:5,7:12:14.99:219,15,0	1/1:3,10:12:24.05:356,24,0	1/1:2,19:21:31.46:538,31,0	1/1:0,4:4:12.04:182,12,0
chr10	20323494	.	GGGGA	G	7868.76	PASS	AB=1.000;AC=45;AF=0.804;AN=56;BaseQRankSum=5.888;DP=369;FS=51.178;HRun=0;HaplotypeScore=85.4761;InbreedingCoeff=0.1719;MQ=64.97;MQ0=1;MQRankSum=-2.551;QD=22.61;ReadPosRankSum=8.213;VQSLOD=2.3835;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:18,0:18:54.86:188,0,55	0/1:7,0:7:55.70:56,0,80	0/0:7,0:6:10.09:0,10,95	0/0:14,0:9:13.63:0,14,246	0/1:12,0:12:23.90:66,0,24	1/1:2,15:17:29.97:461,30,0	1/1:3,20:23:29.88:404,30,0	1/1:3,13:16:6.08:479,6,0	1/1:2,14:16:27.09:445,27,0	1/1:0,10:10:29.70:397,30,0	1/1:1,4:5:9.03:149,9,0	1/1:0,15:15:30.05:464,30,0	1/1:2,9:11:21.07:348,21,0	1/1:0,14:14:26.98:412,27,0	1/1:1,13:14:29.89:496,30,0	1/1:1,7:8:5.58:99,6,0	1/1:0,23:23:48.06:759,48,0	1/1:1,16:17:39.03:611,39,0	1/1:2,10:12:32.10:402,32,0	1/1:0,9:9:15.01:219,15,0	1/1:1,18:19:17.62:262,18,0	1/1:2,11:13:14.47:178,14,0	1/1:2,7:9:15.49:220,15,0	1/1:0,10:10:12.04:198,12,0	0/1:12,0:12:67.93:79,0,68	0/1:11,0:10:0.74:141,0,1	0/1:21,0:21:28.23:260,0,28	0/1:6,0:6:29.41:75,0,29
chr10	20323498	.	A	AG	2611.08	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=6.700;DP=365;FS=4.116;HRun=12;HaplotypeScore=89.2778;InbreedingCoeff=0.9367;MQ=64.92;MQ0=1;MQRankSum=-1.386;QD=10.16;ReadPosRankSum=3.353;VQSLOD=3.4243;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:35.59:0,36,304	0/0:7,0:7:18.01:0,18,163	0/0:7,0:6:8.03:0,8,61	0/0:13,0:9:17.82:0,18,154	0/0:12,0:12:17.81:0,18,145	1/1:16,0:16:29.46:196,29,0	1/1:22,1:23:25.77:148,26,0	1/1:15,0:15:40.27:304,40,0	1/1:15,0:15:25.89:156,26,0	1/1:11,0:11:22.69:149,23,0	1/1:5,0:5:8.47:41,8,0	1/1:15,0:15:21.95:138,22,0	1/1:9,0:9:20.05:110,20,0	1/1:14,0:14:24.85:142,25,0	1/1:13,0:13:27.70:159,28,0	1/1:7,0:7:5.28:32,5,0	1/1:23,0:23:46.59:300,47,0	1/1:17,1:18:36.75:217,37,0	1/1:10,1:11:32.15:250,32,0	1/1:10,0:10:14.58:84,15,0	1/1:21,0:21:17.77:133,18,0	1/1:11,2:13:14.56:111,15,0	1/1:7,1:8:13.41:84,13,0	1/1:10,0:10:11.74:72,12,0	0/0:13,0:13:27.03:0,27,255	0/0:12,0:11:27:0,27,243	0/0:20,0:20:47.97:0,48,423	0/0:6,0:6:18.02:0,18,166
chr10	20323718	.	TC	T	574.21	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-0.192;DP=623;FS=2.068;HRun=3;HaplotypeScore=86.0332;InbreedingCoeff=0.9663;MQ=89.81;MQ0=0;MQRankSum=-2.980;QD=28.71;ReadPosRankSum=0.624;VQSLOD=2.9904;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,132,1804	0/0:9,0:9:27.08:0,27,372	0/0:22,0:22:54.05:0,54,712	0/0:26,0:26:69.18:0,69,896	0/0:11,0:11:27.08:0,27,369	0/0:15,0:15:45.15:0,45,647	0/0:34,0:34:99:0,102,1466	0/0:21,0:20:63.21:0,63,905	1/1:1,19:20:54.17:669,54,0	0/0:19,0:19:51.12:0,51,696	0/0:10,0:10:27.09:0,27,389	0/0:26,0:26:78.26:0,78,1122	0/0:18,0:18:54.17:0,54,756	0/0:28,0:28:75.25:0,75,1079	0/0:18,0:18:54.18:0,54,778	0/0:28,0:28:81.27:0,81,1167	0/0:38,0:38:99:0,114,1642	0/0:25,0:25:72.24:0,72,1037	0/0:17,0:17:51.16:0,51,714	0/0:14,0:14:36.12:0,36,518	0/0:37,0:37:99:0,102,1432	0/0:15,0:15:45.15:0,45,647	0/0:12,0:12:27.09:0,27,389	0/0:35,0:35:96.32:0,96,1383	0/0:14,0:14:42.13:0,42,586	0/0:26,0:26:78.26:0,78,1108	0/0:34,0:34:96.32:0,96,1381	0/0:4,0:4:12.04:0,12,173
chr10	20325085	.	TA	T	2975.13	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=13.053;DP=511;FS=2.321;HRun=9;HaplotypeScore=58.1647;InbreedingCoeff=0.9821;MQ=77.28;MQ0=1;MQRankSum=-0.261;QD=20.95;ReadPosRankSum=2.540;VQSLOD=4.4538;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,33:36:93.04:851,93,0	1/1:0,10:10:23.93:220,24,0	0/0:15,1:15:18.02:0,18,208	0/0:10,0:10:26.96:0,27,257	1/1:2,16:18:48.02:439,48,0	0/0:18,0:18:51.11:0,51,559	0/0:21,0:21:51.15:0,51,588	0/0:29,0:29:69.01:0,69,730	0/0:9,0:9:18.05:0,18,208	0/0:44,0:44:99:0,120,1344	0/0:18,0:18:39.11:0,39,442	0/0:13,0:13:36.09:0,36,405	0/0:19,0:19:57.03:0,57,630	0/0:17,0:17:48.14:0,48,554	0/0:19,0:19:48.14:0,48,554	0/0:17,0:17:45.12:0,45,509	0/0:16,0:16:48.13:0,48,543	0/0:18,0:18:45.05:0,45,490	0/0:16,0:16:48.14:0,48,554	0/0:16,0:16:33.07:0,33,362	0/0:5,0:5:15.04:0,15,173	0/0:17,0:17:42.10:0,42,467	0/0:21,0:20:54.16:0,54,623	0/0:10,0:10:27.08:0,27,312	1/1:4,22:26:57.03:522,57,0	1/1:2,18:20:22.39:454,22,0	1/1:4,24:28:66.03:604,66,0	1/1:0,4:4:9:82,9,0
chr10	20325871	.	GGGA	G	2358.45	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=13.167;DP=515;FS=0.000;HRun=0;HaplotypeScore=98.9395;InbreedingCoeff=0.9910;MQ=79.07;MQ0=0;MQRankSum=-3.863;QD=8.10;ReadPosRankSum=2.135;VQSLOD=2.7532;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:66.20:0,66,1348	0/0:8,0:8:24.08:0,24,498	0/0:23,0:22:40.61:0,41,874	0/0:24,0:21:60.07:0,60,1011	0/0:23,0:23:69.20:0,69,1347	1/1:20,1:21:34.32:184,34,0	1/1:23,1:24:34.17:171,34,0	1/1:14,0:14:33.43:194,33,0	0/0:30,0:30:90.29:0,90,1866	1/1:11,1:12:27.04:181,27,0	1/1:9,1:10:17.94:108,18,0	1/1:18,0:18:33.75:133,34,0	1/1:16,0:16:27.95:112,28,0	1/1:18,0:18:25.62:100,26,0	0/0:26,0:25:71.81:0,72,587	1/1:17,1:18:37.13:191,37,0	1/1:21,0:21:33.75:133,34,0	1/1:20,0:20:44.14:174,44,0	1/1:14,1:15:28.30:178,28,0	1/1:15,0:15:26.97:130,27,0	1/1:21,2:23:37.08:218,37,0	1/1:13,0:13:15.58:61,16,0	1/1:16,1:17:25.50:136,26,0	1/1:15,1:16:36.76:181,37,0	0/0:25,0:25:69.19:0,69,1348	0/0:20,0:20:54.18:0,54,1128	0/0:17,0:17:51.16:0,51,1027	0/0:4,0:4:12.04:0,12,252
chr10	20325872	.	GGA	G	8259.85	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=6.405;DP=513;FS=0.000;HRun=0;HaplotypeScore=69.2735;InbreedingCoeff=0.9932;MQ=79.88;MQ0=0;MQRankSum=-2.449;QD=28.78;ReadPosRankSum=2.181;VQSLOD=5.6185;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:69.19:0,69,1112	0/0:8,0:8:24.08:0,24,399	0/0:25,0:23:49.10:0,49,738	0/0:24,0:21:54.39:0,54,830	0/0:23,0:23:69.18:0,69,1080	1/1:3,18:21:38.98:543,39,0	1/1:3,19:22:39.10:543,39,0	1/1:1,13:14:38.99:443,39,0	0/0:31,0:31:93.29:0,93,1531	1/1:2,10:12:30.06:392,30,0	1/1:1,9:10:20.60:282,21,0	1/1:1,17:18:39.13:565,39,0	1/1:0,16:16:33.03:477,33,0	1/1:1,17:18:29.86:429,30,0	0/0:27,0:26:69.81:0,70,349	1/1:1,17:18:42.07:563,42,0	1/1:1,20:21:39.13:565,39,0	1/1:0,20:20:51.17:738,51,0	1/1:3,12:15:41.73:479,42,0	1/1:1,14:15:35.95:420,36,0	1/1:2,21:23:42.09:564,42,0	1/1:1,11:12:18.06:260,18,0	1/1:4,12:16:29.97:409,30,0	1/1:1,15:16:42.11:587,42,0	0/0:24,0:24:69.19:0,69,1108	0/0:19,0:19:54.17:0,54,908	0/0:17,0:17:51.15:0,51,826	0/0:4,0:4:12.04:0,12,203
chr10	20325873	.	GA	G	3979.81	PASS	AB=1.000;AC=35;AF=0.625;AN=56;BaseQRankSum=13.686;DP=512;FS=3.695;HRun=1;HaplotypeScore=75.0356;InbreedingCoeff=0.9190;MQ=82.25;MQ0=0;MQRankSum=-2.614;QD=12.96;ReadPosRankSum=3.827;VQSLOD=2.8477;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:69.17:0,69,865	0/0:9,0:9:24.06:0,24,303	0/0:24,2:24:34.83:0,35,677	0/0:25,1:23:65.18:0,65,712	0/0:23,0:23:65.26:0,65,825	1/1:19,1:20:38.26:242,38,0	1/1:21,1:22:38.37:242,38,0	1/1:13,0:13:38.64:274,39,0	0/0:32,0:32:96.27:0,96,1229	1/1:11,1:12:29.52:192,30,0	1/1:10,0:10:19.94:128,20,0	1/1:17,1:18:38.43:245,38,0	1/1:16,0:16:32.50:207,32,0	1/1:17,1:18:29.29:183,29,0	0/1:27,0:26:25.18:95,0,25	1/1:18,0:18:41.34:262,41,0	1/1:20,0:20:38.43:244,38,0	1/1:20,0:20:50.25:320,50,0	1/1:13,2:15:41.55:308,42,0	1/1:14,0:14:35.50:229,36,0	1/1:23,0:23:41.26:257,41,0	1/1:11,0:11:17.72:113,18,0	1/1:13,1:14:29.42:181,29,0	1/1:16,0:16:41.31:261,41,0	0/0:25,0:25:72.17:0,72,903	0/0:19,0:19:54.15:0,54,704	0/0:17,0:17:51.14:0,51,661	0/0:5,0:5:15.03:0,15,177
chr10	20327294	.	GT	G	23996.82	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-6.864;DP=720;FS=4.795;HRun=2;HaplotypeScore=77.4499;InbreedingCoeff=0.9970;MQ=87.31;MQ0=0;MQRankSum=-10.734;QD=35.71;ReadPosRankSum=5.844;VQSLOD=5.1148;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,28:29:81.26:1051,81,0	1/1:0,10:10:27.09:350,27,0	0/0:19,0:19:54.17:0,54,753	0/0:29,0:29:69.20:0,69,982	1/1:0,13:13:39.13:506,39,0	1/1:0,20:20:57.19:740,57,0	1/1:0,22:22:51.17:662,51,0	1/1:0,17:17:51.10:612,51,0	1/1:0,35:35:99:1324,102,0	1/1:3,35:38:99:1231,102,0	1/1:0,7:7:21.07:273,21,0	1/1:0,27:27:72.23:934,72,0	1/1:0,27:27:78.25:1012,78,0	1/1:0,32:32:96.31:1242,96,0	1/1:0,38:38:99:1441,111,0	1/1:0,46:46:99:1749,135,0	1/1:0,35:35:96.31:1246,96,0	1/1:0,26:26:69.22:896,69,0	1/1:1,19:20:57.17:726,57,0	1/1:0,12:12:33.11:428,33,0	1/1:0,57:57:99:1946,150,0	1/1:1,22:23:60.15:759,60,0	1/1:0,12:12:30.10:389,30,0	1/1:1,41:42:99:1480,114,0	1/1:0,17:17:48.16:622,48,0	1/1:0,19:19:57.13:705,57,0	1/1:0,30:30:75.24:973,75,0	1/1:0,18:18:54.18:701,54,0
chr10	20328944	.	GA	G	9762.59	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=11.800;DP=576;FS=2.994;HRun=7;HaplotypeScore=59.2272;InbreedingCoeff=0.9745;MQ=81.02;MQ0=0;MQRankSum=-2.579;QD=25.69;ReadPosRankSum=2.458;VQSLOD=5.6619;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:63.20:0,63,792	0/0:12,0:12:36.12:0,36,453	0/0:18,0:18:3.55:0,4,225	0/0:14,0:14:32.24:0,32,341	0/0:23,0:23:66.16:0,66,799	1/1:3,25:28:69.16:704,69,0	1/1:2,15:17:36.08:367,36,0	1/1:3,20:23:57.13:582,57,0	1/1:1,21:22:57.13:582,57,0	1/1:5,19:24:57.13:582,57,0	1/1:2,25:27:69.15:704,69,0	1/1:0,16:16:45.10:459,45,0	1/1:1,17:18:45.10:459,45,0	1/1:4,14:18:39.09:397,39,0	0/0:21,0:21:54.17:0,54,679	1/1:2,23:25:69.16:704,69,0	1/1:2,26:28:72.16:735,72,0	1/1:1,17:18:48.11:489,48,0	1/1:3,18:21:54.12:550,54,0	1/1:2,24:26:69.16:704,69,0	1/1:2,13:15:39.09:398,39,0	1/1:1,18:19:51.11:520,51,0	1/1:4,18:22:48.10:490,48,0	1/1:1,12:13:33.07:337,33,0	0/0:17,0:17:51.14:0,51,627	0/0:23,1:24:17.54:0,18,535	0/0:25,0:25:72.22:0,72,894	0/0:17,0:17:51.16:0,51,641
chr10	20329607	.	ACT	A	1928.19	PASS	AB=0.889;AC=39;AF=0.722;AN=54;BaseQRankSum=6.391;DP=256;FS=60.274;HRun=0;HaplotypeScore=100.5772;InbreedingCoeff=0.5945;MQ=89.50;MQ0=2;MQRankSum=-5.435;QD=11.34;ReadPosRankSum=4.478;VQSLOD=1.2719;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:13,3:16:27.17:233,27,0	1/1:2,0:2:5.93:39,6,0	0/0:20,0:18:37.01:0,37,522	0/0:28,0:18:33.90:0,34,429	0/0:9,0:9:0.61:0,1,16	1/1:3,0:3:6.49:82,6,0	1/1:10,2:12:14.65:194,15,0	1/1:8,0:7:11.92:89,12,0	0/0:18,0:18:40.38:0,40,666	1/1:7,2:9:23.10:199,23,0	./.	1/1:4,2:6:17.66:149,18,0	1/1:7,3:10:19.75:162,20,0	1/1:9,1:10:11.52:114,12,0	0/0:4,0:4:12.04:0,12,207	0/1:7,1:8:37.38:77,0,37	0/0:3,0:3:2.68:0,3,11	1/1:4,0:4:2.68:11,3,0	1/1:9,2:9:8.87:135,9,0	0/0:1,0:1:0:0,0,0	1/1:19,3:21:8.67:73,9,0	1/1:4,3:7:9.03:112,9,0	1/1:4,0:4:3:27,3,0	1/1:11,0:11:3.01:30,3,0	1/1:10,1:11:17.86:164,18,0	1/1:5,1:6:11.62:90,12,0	1/1:6,0:6:11.16:62,11,0	1/1:4,0:4:5.93:53,6,0
chr10	20329611	.	T	TCTC	5981.67	PASS	AB=0.700;AC=39;AF=0.722;AN=54;BaseQRankSum=4.188;DP=254;FS=59.680;HRun=0;HaplotypeScore=106.6779;InbreedingCoeff=0.6286;MQ=85.73;MQ0=2;MQRankSum=-5.737;QD=35.61;ReadPosRankSum=3.864;VQSLOD=2.8145;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,9:17:38.27:771,38,0	1/1:0,2:2:6.02:134,6,0	0/0:22,0:18:38.42:0,38,506	0/0:26,0:16:31.07:0,31,512	0/0:6,5:11:3.50:0,4,14	1/1:0,2:3:9.03:142,9,0	1/1:5,7:12:5.27:454,5,0	1/1:7,5:11:25.31:606,25,0	0/0:17,0:17:44.95:0,45,671	1/1:6,6:11:30.05:575,30,0	./.	1/1:3,3:6:18.06:381,18,0	1/1:6,3:9:21.07:376,21,0	1/1:3,4:7:15.05:298,15,0	0/0:4,0:4:12.04:0,12,200	0/1:4,3:7:37.93:166,0,38	0/0:2,1:2:2.98:0,3,22	1/1:1,1:2:3.01:68,3,0	1/1:6,2:8:17.98:273,18,0	0/0:0,1:1:0:0,0,0	1/1:10,12:20:12.51:262,13,0	1/1:3,2:5:9.03:171,9,0	1/1:1,1:3:3.01:64,3,0	1/1:4,6:10:6.02:116,6,0	1/1:5,7:12:21.03:383,21,0	1/1:6,2:8:7.23:290,7,0	1/1:2,4:6:15.05:324,15,0	1/1:2,1:3:6.02:128,6,0
chr10	20329620	.	TC	T	1512.23	PASS	AB=0.755;AC=33;AF=0.589;AN=56;BaseQRankSum=7.390;DP=230;FS=42.729;HRun=4;HaplotypeScore=91.0696;InbreedingCoeff=0.0397;MQ=69.24;MQ0=2;MQRankSum=-4.578;QD=9.57;ReadPosRankSum=3.838;VQSLOD=-0.6801;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:11,6:17:62.17:174,0,62	0/1:2,2:4:32.93:49,0,33	0/0:15,0:11:29.65:0,30,342	0/0:22,0:12:18.62:0,19,234	0/0:11,2:13:1.76:0,2,39	1/1:2,1:3:2.33:18,2,0	1/1:5,5:10:23.46:213,23,0	0/1:5,4:8:89.85:90,0,100	0/0:16,0:16:36.11:0,36,502	0/1:10,4:13:59.72:150,0,60	0/0:1,0:1:0.47:0,0,1	1/1:4,2:6:13.78:145,14,0	0/1:4,3:7:5.56:104,0,6	1/1:2,2:4:7.31:87,7,0	0/0:5,0:5:11.71:0,12,150	1/1:4,1:5:4.55:45,5,0	1/1:3,0:2:2.74:12,3,0	1/1:0,1:1:3.01:36,3,0	0/1:10,2:9:20.22:91,0,20	0/1:1,0:1:0:0,0,0	1/1:13,8:19:2.13:27,2,0	0/1:4,2:6:2.28:39,0,2	0/1:1,2:3:10.03:29,0,10	1/1:3,2:5:3.01:34,3,0	0/1:6,5:11:84.57:126,0,85	0/1:8,2:10:66.43:66,0,123	1/1:1,3:4:8.15:100,8,0	1/1:1,1:2:3.01:36,3,0
chr10	20329626	.	CT	C	1640.74	PASS	AB=0.791;AC=37;AF=0.685;AN=54;BaseQRankSum=7.086;DP=192;FS=57.442;HRun=1;HaplotypeScore=80.4862;InbreedingCoeff=0.3028;MQ=67.30;MQ0=2;MQRankSum=-2.876;QD=12.82;ReadPosRankSum=0.239;VQSLOD=-0.2485;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:10,5:15:64.05:153,0,64	0/1:4,0:4:38.73:44,0,39	0/0:13,0:9:24.03:0,24,310	0/0:21,0:11:23.43:0,23,213	0/0:9,1:10:5.77:0,6,55	1/1:2,0:2:5.81:61,6,0	1/1:5,3:8:23.79:214,24,0	1/1:4,3:7:18.38:109,18,0	0/0:15,0:15:36.11:0,36,555	0/1:6,6:11:30.90:122,0,31	0/0:1,0:1:0.47:0,0,1	1/1:2,3:5:14.92:134,15,0	1/1:3,3:6:16.07:121,16,0	1/1:2,1:3:8.91:73,9,0	0/0:4,0:4:8.72:0,9,142	1/1:1,1:2:6.01:67,6,0	1/1:1,1:1:2.98:22,3,0	1/1:1,0:1:2.80:13,3,0	1/1:3,7:8:17.65:211,18,0	./.	1/1:9,7:14:3.01:38,3,0	1/1:3,2:5:8.72:94,9,0	1/1:3,0:3:3:29,3,0	1/1:2,0:2:3.01:31,3,0	0/1:7,3:10:71.93:120,0,72	0/1:7,3:10:58:58,0,155	1/1:3,0:3:8.89:75,9,0	1/1:2,0:2:2.98:21,3,0
chr10	20329896	.	T	TC	119.18	PASS	AB=0.875;AC=14;AF=0.467;AN=30;BaseQRankSum=0.521;DP=75;FS=0.000;HRun=3;HaplotypeScore=54.8676;InbreedingCoeff=0.2092;MQ=39.78;MQ0=2;MQRankSum=0.851;QD=3.97;ReadPosRankSum=0.496;VQSLOD=0.1450;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:1.32:0,1,44	0/0:2,0:2:2.73:0,3,21	./.	./.	1/1:5,0:5:0.83:2,1,0	./.	./.	1/1:1,1:2:2.83:31,3,0	0/1:13,0:13:4.94:124,0,5	0/1:2,1:3:12.10:19,0,12	./.	1/1:2,0:1:1.25:3,1,0	0/0:0,1:1:0:0,0,0	./.	./.	./.	1/1:2,0:2:1.25:3,1,0	./.	1/1:1,0:1:2.99:23,3,0	0/0:1,1:2:2.99:0,3,24	./.	./.	1/1:2,0:1:2.37:8,2,0	./.	0/0:5,1:6:5.90:0,6,33	0/0:8,0:8:5.69:0,6,43	0/0:1,0:1:1.55:0,2,4	./.
chr10	20330442	.	CCT	C	21484.73	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-1.980;DP=622;FS=0.659;HRun=0;HaplotypeScore=111.2596;InbreedingCoeff=0.9983;MQ=83.40;MQ0=5;MQRankSum=-9.765;QD=37.04;ReadPosRankSum=5.628;VQSLOD=6.9248;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,52:57:99:1977,138,0	1/1:0,9:9:24.08:344,24,0	0/0:18,0:17:48.16:0,48,835	0/0:24,0:24:54.18:0,54,905	1/1:0,22:22:60.20:860,60,0	1/1:0,15:15:45.15:645,45,0	1/1:1,23:24:60.20:860,60,0	1/1:4,14:18:42.14:602,42,0	1/1:0,20:19:48.16:688,48,0	1/1:1,14:15:42.14:602,42,0	1/1:0,21:21:53.90:773,54,0	1/1:0,24:24:72.24:1032,72,0	1/1:2,23:25:66.22:946,66,0	1/1:2,14:16:39.13:559,39,0	1/1:0,25:25:72.24:1032,72,0	1/1:1,19:20:54.18:774,54,0	1/1:0,37:37:99:1505,105,0	1/1:1,16:17:45.14:623,45,0	1/1:1,10:11:30.10:430,30,0	1/1:0,11:11:30.10:425,30,0	1/1:2,36:37:81.27:1161,81,0	1/1:3,19:22:54.18:771,54,0	1/1:0,19:19:51.17:730,51,0	1/1:1,16:17:45.15:645,45,0	1/1:1,25:24:60.20:860,60,0	1/1:0,22:22:66.19:923,66,0	1/1:1,28:29:63.21:903,63,0	1/1:1,19:19:57.19:817,57,0
chr10	20330915	.	A	AT	4284.55	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=13.599;DP=629;FS=2.205;HRun=7;HaplotypeScore=77.3271;InbreedingCoeff=0.9982;MQ=78.93;MQ0=0;MQRankSum=-2.096;QD=27.29;ReadPosRankSum=1.294;VQSLOD=5.6196;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,26:33:72.22:861,72,0	1/1:0,7:7:18.06:217,18,0	0/0:26,0:24:46.25:0,46,412	0/0:20,0:16:30.10:0,30,235	1/1:4,15:19:45.10:527,45,0	0/0:25,0:25:71.97:0,72,671	0/0:21,0:21:57.03:0,57,528	0/0:30,0:30:69.04:0,69,649	0/0:25,0:25:60.09:0,60,579	0/0:25,0:25:69.11:0,69,666	0/0:15,0:15:33.05:0,33,318	0/0:25,0:25:69.11:0,69,666	0/0:20,0:20:57.09:0,57,548	0/0:18,0:18:45.04:0,45,422	0/0:25,0:25:75.10:0,75,719	0/0:21,0:21:63.10:0,63,608	0/0:31,0:31:90.12:0,90,863	0/0:25,0:25:66.08:0,66,630	0/0:21,0:21:48.07:0,48,463	0/0:16,0:16:36.04:0,36,342	0/0:24,0:24:60.09:0,60,579	0/0:17,0:17:42.06:0,42,403	0/0:17,0:17:42.06:0,42,405	0/0:25,0:25:72.07:0,72,681	1/1:6,16:22:42.09:491,42,0	1/1:8,27:35:29.31:920,29,0	1/1:2,27:29:69.21:833,69,0	1/1:0,12:12:36.11:435,36,0
chr10	20331111	.	TC	T	5023.65	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=13.261;DP=697;FS=9.944;HRun=7;HaplotypeScore=72.0884;InbreedingCoeff=0.9984;MQ=86.44;MQ0=0;MQRankSum=-2.823;QD=25.24;ReadPosRankSum=4.150;VQSLOD=5.1631;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,41:47:99:1132,111,0	1/1:1,9:10:27.06:275,27,0	0/0:22,0:22:51.12:0,51,615	0/0:25,0:24:42.10:0,42,502	1/1:3,30:33:87.19:886,87,0	0/0:32,0:32:87.26:0,87,1079	0/0:29,0:29:69.22:0,69,865	0/0:18,0:18:48.14:0,48,582	1/1:0,12:12:33.08:337,33,0	0/0:24,0:24:63.19:0,63,782	0/0:17,0:17:45.14:0,45,566	0/0:34,0:34:99:0,102,1240	0/0:24,0:24:63.20:0,63,787	0/0:29,0:29:87.27:0,87,1083	0/0:20,0:20:57.17:0,57,705	0/0:31,0:31:90.28:0,90,1120	0/0:26,0:26:72.23:0,72,905	0/0:26,0:26:72.22:0,72,889	0/0:29,0:29:72.20:0,72,870	0/0:20,0:20:54.15:0,54,654	0/0:50,0:50:99:0,138,1715	0/0:20,0:20:54.17:0,54,679	0/0:10,0:10:24.08:0,24,302	0/0:12,0:12:24.08:0,24,302	1/1:1,25:26:63.14:642,63,0	1/1:5,31:36:20.84:833,21,0	1/1:1,20:21:50.71:519,51,0	1/1:0,14:14:39.09:398,39,0
chr10	20331794	.	A	AGT	5831.15	PASS	AB=1.000;AC=30;AF=0.536;AN=56;BaseQRankSum=7.712;DP=918;FS=4.340;HRun=0;HaplotypeScore=205.9328;InbreedingCoeff=-0.0030;MQ=66.39;MQ0=10;MQRankSum=-1.888;QD=8.16;ReadPosRankSum=5.043;VQSLOD=4.3656;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,23:36:51.59:940,52,0	1/1:1,14:15:21.07:338,21,0	0/0:32,0:26:43.79:0,44,557	0/0:32,0:24:42.03:0,42,532	1/1:13,20:33:55.11:836,55,0	0/1:32,0:31:13.88:14,0,67	0/0:26,0:26:1.23:0,1,68	0/0:48,0:42:16.81:0,17,404	0/1:31,0:28:39.76:40,0,106	0/0:30,0:24:16.22:0,16,173	1/1:17,0:17:8.12:21,8,0	0/1:26,0:25:7.97:8,0,131	0/1:43,0:41:19.45:19,0,115	0/1:31,0:30:35.95:36,0,176	0/1:38,0:34:12.85:26,0,13	0/0:35,0:34:2.58:0,3,214	0/1:31,0:30:11.52:12,0,29	0/1:27,0:26:23.01:23,0,57	0/1:29,0:29:14.99:15,0,136	0/1:32,0:32:3.44:3,0,97	0/1:79,0:74:26.85:27,0,249	0/1:36,0:36:51.99:52,0,56	0/1:24,0:24:1.39:1,0,83	0/1:29,0:28:13.20:13,0,190	1/1:5,30:35:54.18:868,54,0	1/1:21,13:35:7.45:1034,7,0	1/1:17,10:27:44.72:640,45,0	1/1:13,14:27:27.54:864,28,0
chr10	20331807	.	A	ATG	24228.77	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-5.917;DP=1022;FS=0.000;HRun=0;HaplotypeScore=166.4970;InbreedingCoeff=0.9444;MQ=57.34;MQ0=41;MQRankSum=2.148;QD=24.93;ReadPosRankSum=5.395;VQSLOD=5.5118;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,24:41:50.94:823,51,0	1/1:6,8:14:27.09:426,27,0	0/0:25,0:19:32.34:0,32,329	0/0:25,0:17:14.94:0,15,190	1/1:10,26:36:7.76:649,8,0	1/1:5,28:31:54.18:903,54,0	1/1:4,19:23:15.18:484,15,0	1/1:28,42:53:99:1734,108,0	1/1:29,21:41:44.36:736,44,0	1/1:15,21:27:26.82:900,27,0	1/1:2,19:21:32.17:550,32,0	1/1:11,21:28:30.10:502,30,0	1/1:8,29:33:66.14:1104,66,0	1/1:10,23:30:59.79:963,60,0	1/1:19,20:35:93.30:1512,93,0	1/1:8,27:33:42.14:703,42,0	1/1:7,26:32:42.14:683,42,0	1/1:4,27:30:58.08:944,58,0	1/1:10,24:31:84.17:1265,84,0	1/1:5,29:35:58.76:1001,59,0	1/1:22,68:79:99:2309,138,0	1/1:6,36:40:59.93:1003,60,0	1/1:3,22:25:42.13:703,42,0	1/1:14,23:34:51.07:853,51,0	1/1:18,22:39:81.23:1255,81,0	1/1:12,22:36:50.63:1176,51,0	1/1:9,16:25:24.97:389,25,0	1/1:6,22:31:44.15:659,44,0
chr10	20331849	.	ATG	A	272.18	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.300;DP=1105;FS=2.804;HRun=0;HaplotypeScore=214.5432;InbreedingCoeff=0.9896;MQ=50.59;MQ0=76;MQRankSum=-2.377;QD=4.86;ReadPosRankSum=-3.082;VQSLOD=2.2542;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:35:63.60:0,64,1027	0/0:14,0:14:36.10:0,36,569	0/0:29,0:8:24.08:0,24,373	0/0:35,0:12:18.14:0,18,488	0/0:35,0:33:46.79:0,47,810	0/0:42,0:37:72.20:0,72,1130	0/0:29,0:29:60.18:0,60,999	0/0:63,0:50:99:0,129,2063	1/1:27,29:44:30.66:367,31,0	0/0:49,0:38:99:0,105,1784	0/0:25,0:25:51.11:0,51,866	0/0:41,0:35:68.89:0,69,1096	0/0:43,0:39:93.28:0,93,1505	0/0:42,0:34:69.24:0,69,1155	0/0:53,0:45:87.21:0,87,1361	0/0:38,0:30:63.19:0,63,1016	0/0:38,0:35:70.40:0,70,1087	0/0:27,0:26:66.19:0,66,1075	0/0:39,0:31:87.24:0,87,1425	0/0:29,0:28:60.06:0,60,1032	0/0:91,0:75:99:0,155,2469	0/0:39,0:35:50.49:0,50,784	0/0:34,0:33:67.73:0,68,1099	0/0:50,0:44:99:0,99,1617	0/0:37,0:34:90.28:0,90,1475	0/0:36,0:31:84.29:0,84,1409	0/0:30,0:26:63.16:0,63,1051	0/0:21,0:21:49.05:0,49,805
chr10	20331901	.	ATATGTGTGTG	A	1928.28	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.232;DP=1126;FS=0.638;HRun=0;HaplotypeScore=271.6881;InbreedingCoeff=0.9993;MQ=50.24;MQ0=69;MQRankSum=-7.320;QD=17.37;ReadPosRankSum=-3.945;VQSLOD=1.6490;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:30:52.70:0,53,1916	0/0:12,0:12:30.07:0,30,1102	0/0:58,0:14:30.05:0,30,467	0/0:57,0:20:42.06:0,42,734	0/0:31,0:30:55.43:0,55,2020	0/0:27,0:24:48.16:0,48,1429	0/0:46,0:46:99:0,99,2692	0/0:58,0:40:86.93:0,87,1402	1/1:43,7:41:58.08:1099,58,0	0/0:43,0:35:69.22:0,69,2638	0/0:22,0:22:35.35:0,35,1073	0/0:45,0:40:93.30:0,93,3398	0/0:47,0:44:99:0,102,3826	0/0:41,0:33:75.26:0,75,2881	1/1:21,40:54:47.80:951,48,0	0/0:45,0:37:90.30:0,90,3297	0/0:42,0:40:94.66:0,95,3021	0/0:24,0:24:54.15:0,54,1759	0/0:32,0:23:45.11:0,45,1263	0/0:28,0:27:49.21:0,49,1704	0/0:68,0:57:99:0,114,3750	0/0:37,0:34:78.25:0,78,2677	0/0:36,0:35:68.23:0,68,2024	0/0:49,0:45:86.07:0,86,3279	0/0:37,0:34:75.26:0,75,3134	0/0:39,0:37:84.72:0,85,2493	0/0:37,0:34:93.26:0,93,2948	0/0:18,0:18:42.13:0,42,1648
chr10	20332600	.	AT	A	3166.46	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=13.909;DP=668;FS=6.424;HRun=9;HaplotypeScore=94.3688;InbreedingCoeff=0.9847;MQ=78.74;MQ0=0;MQRankSum=-1.250;QD=19.91;ReadPosRankSum=2.753;VQSLOD=4.0782;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,32:40:63.44:822,63,0	1/1:2,10:12:30.01:275,30,0	0/0:17,0:17:32.58:0,33,294	0/0:17,0:16:26.91:0,27,250	1/1:2,17:19:41.49:383,41,0	0/0:21,0:21:57.17:0,57,656	0/0:27,0:28:75.03:0,75,827	0/0:22,0:22:57.15:0,57,642	0/0:34,0:34:99:0,99,1133	0/0:19,0:19:42.12:0,42,475	0/0:17,0:17:42.05:0,42,458	0/0:23,0:24:72.05:0,72,811	0/0:30,0:30:84.16:0,84,910	0/0:22,0:22:57.14:0,57,635	0/0:26,0:26:69.18:0,69,777	0/0:27,0:27:69.20:0,69,788	0/0:36,0:36:99:0,105,1199	0/0:18,0:18:42.12:0,42,484	0/0:24,0:24:57.13:0,57,624	0/0:25,0:26:66.17:0,66,737	0/0:27,0:27:69.20:0,69,792	0/0:25,0:25:60.08:0,60,632	0/0:22,0:22:60.10:0,60,637	0/0:26,1:27:50.74:0,51,820	1/1:4,26:30:60.02:549,60,0	1/1:1,16:17:13.39:372,13,0	1/1:1,34:35:96.05:878,96,0	1/1:2,4:6:9:82,9,0
chr10	20333554	.	CT	C	4627.76	PASS	AB=0.545;AC=13;AF=0.232;AN=56;BaseQRankSum=16.872;DP=673;FS=14.335;HRun=3;HaplotypeScore=106.2229;InbreedingCoeff=0.8986;MQ=70.74;MQ0=1;MQRankSum=-5.239;QD=30.45;ReadPosRankSum=4.368;VQSLOD=3.2854;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,38:38:93.29:1141,93,0	1/1:0,12:13:36.11:446,36,0	0/0:17,0:17:51.12:0,51,666	0/0:16,0:16:42.94:0,43,540	1/1:0,18:18:42.13:514,42,0	0/0:22,0:22:63.21:0,63,905	0/0:32,0:32:93.31:0,93,1330	0/0:35,0:35:93.31:0,93,1335	0/0:17,0:17:51.15:0,51,714	0/0:22,0:22:66.21:0,66,934	0/0:16,0:16:48.07:0,48,633	0/0:18,0:18:51.17:0,51,733	0/0:23,0:23:63.21:0,63,905	0/0:23,0:23:69.21:0,69,957	0/0:36,0:36:99:0,108,1519	0/0:34,0:33:99:0,99,1402	0/0:27,0:27:75.25:0,75,1080	0/0:20,0:20:57.19:0,57,821	0/0:26,0:26:75.25:0,75,1074	0/0:18,0:17:45.15:0,45,648	0/0:42,0:42:99:0,120,1727	0/0:21,0:21:63.21:0,63,906	0/0:25,0:25:69.23:0,69,992	0/0:31,0:31:84.27:0,84,1191	1/1:0,20:19:54.17:662,54,0	0/1:4,20:23:23.24:642,0,23	1/1:1,31:32:81.25:1000,81,0	1/1:0,6:6:18.06:223,18,0
chr10	20333679	.	T	TCCTCC	8216.38	PASS	AB=0.986;AC=31;AF=0.554;AN=56;BaseQRankSum=14.443;DP=439;FS=1.416;HRun=0;HaplotypeScore=135.5509;InbreedingCoeff=-0.5490;MQ=94.21;MQ0=0;MQRankSum=-12.248;QD=21.40;ReadPosRankSum=11.944;VQSLOD=3.2147;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:21,0:21:17.88:305,0,18	0/1:9,0:9:22.89:238,0,23	0/0:27,0:27:78.18:0,78,1509	0/0:27,0:28:72.22:0,72,1515	0/1:15,1:16:16.10:319,0,16	0/1:15,1:16:66.86:319,0,67	0/1:17,1:18:69.72:394,0,70	0/1:18,0:18:99:195,0,353	0/1:9,0:9:21.93:168,0,22	0/1:22,1:23:36.97:682,0,37	0/1:13,0:13:2.89:331,0,3	0/1:17,0:17:33.74:429,0,34	1/1:7,0:7:2.07:202,2,0	1/1:6,0:6:0.06:185,0,0	0/1:19,0:19:31.82:481,0,32	0/1:21,0:21:93.69:362,0,94	0/1:12,0:12:9.91:229,0,10	0/1:13,0:13:73.16:189,0,73	0/1:13,0:13:99:144,0,178	1/1:20,0:20:33.16:594,33,0	0/1:13,0:13:99:134,0,101	0/1:15,0:15:58.76:248,0,59	1/1:13,1:14:29.67:389,30,0	0/1:7,0:7:37.84:68,0,38	0/1:14,0:14:67.67:340,0,68	0/1:20,0:20:99:390,0,186	1/1:20,0:20:6.15:550,6,0	0/1:9,0:10:10.79:329,0,11
chr10	20333680	.	A	ACTCCAT	31058.14	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-6.219;DP=483;FS=24.656;HRun=0;HaplotypeScore=100.1247;InbreedingCoeff=0.9624;MQ=90.93;MQ0=0;MQRankSum=-11.153;QD=72.57;ReadPosRankSum=4.974;VQSLOD=3.2983;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:11,14:25:33.11:1084,33,0	1/1:2,6:11:21.07:725,21,0	0/0:27,0:27:72.21:0,72,1356	0/0:28,0:28:72.18:0,72,1492	1/1:5,10:16:33.11:1103,33,0	1/1:10,9:20:39.13:1351,39,0	1/1:4,12:18:36.12:1250,36,0	1/1:11,10:21:54.16:1554,54,0	1/1:2,7:9:18.06:604,18,0	1/1:5,18:25:69.24:2302,69,0	1/1:5,9:14:36.12:1223,36,0	1/1:5,12:17:42.14:1393,42,0	1/1:1,6:8:20.64:667,21,0	1/1:1,4:7:18.06:566,18,0	1/1:5,14:20:54.19:1764,54,0	1/1:6,15:21:42.14:1345,42,0	1/1:2,10:13:27.09:935,27,0	1/1:2,11:13:30.10:947,30,0	1/1:12,6:19:45.15:1311,45,0	1/1:5,16:23:57.20:1898,57,0	1/1:6,8:15:12.04:417,12,0	1/1:8,8:16:27.09:937,27,0	1/1:2,12:15:36.12:1127,36,0	1/1:5,3:9:15.05:521,15,0	1/1:4,10:15:36.12:1193,36,0	1/1:10,13:25:63.21:1954,63,0	1/1:5,15:21:54.19:1846,54,0	1/1:1,8:12:30.10:1042,30,0
chr10	20333795	.	CT	C	413.51	PASS	AB=0.813;AC=16;AF=0.320;AN=50;BaseQRankSum=1.161;DP=348;FS=2.206;HRun=2;HaplotypeScore=61.2253;InbreedingCoeff=0.1050;MQ=25.86;MQ0=99;MQRankSum=-0.521;QD=2.42;ReadPosRankSum=-0.098;VQSLOD=-0.7193;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:16,6:10:0:0,0,0	1/1:2,6:7:2.44:6,2,0	./.	./.	./.	0/1:17,5:17:17.62:18,0,26	0/1:12,5:11:16.71:17,0,44	0/0:9,0:7:11.24:0,11,109	0/1:11,3:11:1.13:27,0,1	0/1:10,2:11:44.34:44,0,184	0/0:5,0:5:0:0,0,1	0/0:10,2:8:4.25:0,4,36	0/0:9,1:8:7.82:0,8,64	0/0:8,1:6:2.22:0,2,8	1/1:10,0:5:2.02:24,2,0	0/0:3,3:4:0:0,0,1	0/1:14,3:8:1.63:2,0,40	0/1:11,2:8:42.88:43,0,116	0/0:12,0:7:16.25:0,16,149	0/0:12,0:9:5.91:0,6,41	0/0:18,2:8:5.51:0,6,50	0/0:17,3:14:3:0,3,26	0/0:10,6:15:3.93:0,4,14	0/0:20,1:10:2.97:0,3,20	0/0:4,10:12:3.01:0,3,34	0/1:7,4:6:38.49:134,0,38	1/1:6,6:8:12.04:152,12,0	1/1:9,4:6:6.49:78,6,0
chr10	20333825	.	TCACACACACACACACACA	T	703.44	PASS	AB=0.870;AC=14;AF=0.333;AN=42;BaseQRankSum=4.280;DP=378;FS=12.616;HRun=0;HaplotypeScore=101.0918;InbreedingCoeff=0.2773;MQ=26.11;MQ0=85;MQRankSum=-1.277;QD=4.60;ReadPosRankSum=-1.412;VQSLOD=0.4082;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:16:2.64:0,3,151	0/0:9,0:8:4.46:0,4,233	./.	./.	0/0:14,0:10:5.97:0,6,233	1/1:17,0:14:2.84:9,3,0	1/1:16,1:11:0.47:1,0,0	0/0:15,0:13:23.94:0,24,499	0/0:15,0:14:2.84:0,3,53	0/0:11,0:11:3.01:0,3,66	./.	./.	1/1:3,1:3:3.01:143,3,0	./.	./.	0/0:7,0:6:1.55:0,2,4	0/1:14,1:7:6.58:220,0,7	0/1:18,3:16:99:415,0,208	0/0:9,0:7:4.57:0,5,146	1/1:12,1:11:2.97:20,3,0	0/0:20,0:12:3.01:0,3,198	0/1:17,2:13:0:0,0,0	0/1:10,2:12:0:0,0,0	1/1:29,1:18:0.47:1,0,0	0/0:15,0:15:9.03:0,9,533	0/0:17,0:13:33.06:0,33,1074	./.	0/0:14,0:8:9.03:0,9,268
chr10	20335493	.	TGAGAGA	T	104.17	PASS	AB=0.964;AC=7;AF=0.135;AN=52;BaseQRankSum=-3.698;DP=591;FS=5.419;HRun=0;HaplotypeScore=190.1146;InbreedingCoeff=0.1227;MQ=39.76;MQ0=59;MQRankSum=-5.754;QD=0.77;ReadPosRankSum=1.978;VQSLOD=2.2746;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:31:5.93:0,6,89	0/0:11,0:10:11.95:0,12,217	./.	./.	0/0:25,0:24:4.94:0,5,77	0/0:20,0:16:17.25:0,17,311	0/0:33,0:29:1.31:0,1,3	1/1:16,2:15:8.84:128,9,0	0/1:14,4:15:9.46:9,0,44	0/1:21,0:20:60.42:60,0,263	0/0:25,0:23:23.81:0,24,416	0/0:23,0:23:24.54:0,25,452	0/0:21,0:20:19.20:0,19,370	0/0:23,0:22:16.42:0,16,251	0/0:21,0:18:5.01:0,5,27	0/0:29,0:25:22.42:0,22,229	0/1:26,0:22:14.54:15,0,339	0/1:35,0:30:1.07:1,0,496	0/0:10,0:8:12.96:0,13,179	0/0:12,0:12:11.62:0,12,109	0/0:18,0:12:11.74:0,12,216	0/0:28,0:27:8.35:0,8,138	0/0:26,0:20:3.37:0,3,73	0/0:34,0:24:21.02:0,21,421	0/0:23,0:21:20.91:0,21,405	0/0:27,0:24:23.89:0,24,357	0/1:17,0:15:0.79:1,0,248	0/0:7,0:3:3.01:0,3,35
chr10	20335514	.	G	GAC	3572.60	PASS	AB=0.978;AC=26;AF=0.500;AN=52;BaseQRankSum=-0.047;DP=579;FS=120.595;HRun=0;HaplotypeScore=174.9434;InbreedingCoeff=0.0632;MQ=41.22;MQ0=59;MQRankSum=2.151;QD=8.35;ReadPosRankSum=3.765;VQSLOD=0.7047;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:25:5.96:0,6,43	0/0:9,0:8:15.33:0,15,112	./.	./.	0/0:25,0:25:5.99:0,6,63	0/1:21,0:18:7.98:270,0,8	1/1:30,1:27:1.87:96,2,0	0/1:22,0:16:21.86:22,0,167	0/0:17,0:14:18.90:0,19,159	1/1:22,3:24:19.60:556,20,0	0/1:22,3:23:21.73:231,0,22	1/1:20,1:21:6.96:319,7,0	1/1:18,1:18:8.05:271,8,0	0/1:17,1:17:22.56:109,0,23	0/0:25,0:22:6.44:0,6,45	0/1:28,1:25:55.21:55,0,72	0/1:24,0:20:28.96:216,0,29	0/1:30,1:26:42.05:333,0,42	0/1:21,0:19:72.10:177,0,72	0/1:15,0:14:14.67:160,0,15	1/1:22,0:17:12.92:192,13,0	1/1:27,2:29:20.87:222,21,0	1/1:21,2:17:7.23:50,7,0	1/1:34,0:25:2.59:268,3,0	0/0:21,0:19:12.88:0,13,111	0/1:18,0:15:26.25:26,0,132	0/0:16,0:14:10.61:0,11,87	0/0:6,0:1:3.01:0,3,33
chr10	20335524	.	CAGAG	C	637.96	PASS	AB=0.975;AC=10;AF=0.192;AN=52;BaseQRankSum=-4.586;DP=569;FS=2.863;HRun=0;HaplotypeScore=193.0557;InbreedingCoeff=0.0373;MQ=43.32;MQ0=53;MQRankSum=3.267;QD=4.34;ReadPosRankSum=-3.522;VQSLOD=2.1205;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:24:4.41:69,4,0	0/1:9,0:8:6.85:126,0,7	./.	./.	0/0:27,0:27:0.09:0,0,1	0/0:20,0:17:22.72:0,23,245	0/0:27,0:23:10.63:0,11,66	0/0:32,0:23:61.83:0,62,770	0/1:12,4:13:15.24:96,0,15	0/0:20,0:20:23.83:0,24,338	0/0:25,0:23:17.62:0,18,274	0/0:19,0:19:21.57:0,22,295	0/0:19,0:18:24.65:0,25,321	0/0:14,0:13:14.36:0,14,188	0/0:8,18:23:2.32:0,2,13	0/0:27,0:23:15.43:0,15,137	0/1:23,0:19:36.46:36,0,280	0/0:24,0:21:12.40:0,12,360	0/0:23,0:21:38.95:0,39,390	0/1:16,0:15:3.85:4,0,64	0/0:22,0:17:13.29:0,13,208	0/0:33,0:33:6.71:0,7,96	0/0:25,0:20:7.31:0,7,76	0/0:33,0:24:17.89:0,18,281	0/1:17,0:16:4.53:129,0,5	0/1:17,0:16:74.30:201,0,74	0/1:16,0:14:47.02:82,0,47	0/1:4,0:2:29.31:30,0,29
chr10	20335528	.	G	GAC	1094.17	PASS	AB=0.929;AC=11;AF=0.212;AN=52;BaseQRankSum=-4.674;DP=590;FS=4.674;HRun=0;HaplotypeScore=192.1763;InbreedingCoeff=0.3822;MQ=44.78;MQ0=48;MQRankSum=3.798;QD=7.29;ReadPosRankSum=-0.466;VQSLOD=3.2949;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:31,0:27:6.57:83,0,7	1/1:11,0:10:20.91:210,21,0	./.	./.	1/1:6,19:27:1.77:7,2,0	0/0:20,0:17:33.95:0,34,220	0/0:29,0:26:22.58:0,23,192	0/0:34,0:25:68.05:0,68,901	0/1:19,0:16:50.68:51,0,55	0/0:22,0:22:18.39:0,18,245	0/0:26,0:24:29.70:0,30,255	0/0:20,0:20:15.55:0,16,94	0/0:18,0:18:21.74:0,22,156	0/0:13,0:12:13.53:0,14,106	0/0:25,0:22:3.31:0,3,15	0/0:27,0:23:27.97:0,28,236	0/0:23,0:20:13.81:0,14,202	0/0:23,0:21:36.41:0,36,287	0/0:24,0:22:57.86:0,58,590	0/0:18,0:17:26.44:0,26,215	0/0:23,0:18:12.40:0,12,78	0/0:32,0:32:22.73:0,23,160	0/0:24,0:19:11.07:0,11,95	0/0:33,0:24:15.17:0,15,118	1/1:19,0:18:29.22:361,29,0	0/1:10,11:21:78.40:323,0,78	0/1:17,0:15:6.69:202,0,7	0/1:4,0:2:6.86:7,0,27
chr10	20335534	.	C	CAGAGAC	1256.10	PASS	AB=1.000;AC=15;AF=0.288;AN=52;BaseQRankSum=-5.777;DP=605;FS=0.594;HRun=0;HaplotypeScore=204.1638;InbreedingCoeff=0.7374;MQ=46.10;MQ0=46;MQRankSum=4.404;QD=8.49;ReadPosRankSum=-1.700;VQSLOD=2.2541;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:20,8:29:8.78:62,9,0	1/1:12,0:11:20.97:231,21,0	./.	./.	0/0:24,0:26:3.43:0,3,20	0/0:23,0:21:32.81:0,33,279	0/0:30,0:29:22.28:0,22,164	0/0:38,0:30:63.18:0,63,970	1/1:16,0:13:2.05:87,2,0	0/0:22,0:22:52.05:0,52,422	0/0:28,0:26:24.96:0,25,324	0/0:20,0:19:27.18:0,27,238	0/0:17,0:17:26.63:0,27,209	0/0:12,0:11:14.89:0,15,158	1/1:28,0:25:0.89:2,1,0	0/0:27,0:23:20.59:0,21,234	0/0:23,0:20:34.38:0,34,305	0/0:25,0:23:40.90:0,41,420	0/0:25,0:23:58.05:0,58,501	0/0:18,0:17:22.90:0,23,167	0/0:23,0:19:23.77:0,24,195	0/0:30,0:30:26.21:0,26,200	0/0:21,0:17:15.45:0,15,126	0/0:33,0:24:18.44:0,18,198	1/1:18,0:18:7.27:380,7,0	0/1:21,0:20:38.36:383,0,38	1/1:14,0:13:20.99:254,21,0	1/1:4,0:2:5.42:22,5,0
chr10	20335602	.	C	CAG	9032.43	PASS	AB=0.783;AC=33;AF=0.589;AN=56;BaseQRankSum=-12.033;DP=612;FS=9.521;HRun=0;HaplotypeScore=121.6811;InbreedingCoeff=0.5995;MQ=58.14;MQ0=6;MQRankSum=1.463;QD=21.01;ReadPosRankSum=2.008;VQSLOD=4.9961;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:66.19:0,66,795	0/0:13,0:13:27.08:0,27,332	1/1:14,0:8:2.27:15,2,0	0/1:41,0:14:17.02:17,0,34	0/0:17,0:17:39.12:0,39,479	1/1:12,13:23:14.19:715,14,0	1/1:14,18:32:54.18:865,54,0	0/0:36,0:31:66.14:0,66,767	0/0:15,0:15:36.11:0,36,443	1/1:8,13:21:35.94:510,36,0	0/1:8,11:19:9.83:364,0,10	1/1:4,11:14:24.08:391,24,0	1/1:6,7:13:24.08:377,24,0	0/1:4,8:12:15.85:272,0,16	0/0:22,0:23:41.95:0,42,481	1/1:2,23:26:54.18:881,54,0	1/1:13,22:34:50.32:1269,50,0	1/1:7,11:18:39.59:677,40,0	0/1:12,8:18:99:333,0,106	1/1:8,19:27:33.11:538,33,0	1/1:14,14:28:9.23:523,9,0	1/1:6,8:14:12.04:196,12,0	1/1:7,8:15:21.07:342,21,0	1/1:8,17:22:44.76:691,45,0	0/0:19,0:18:45.08:0,45,512	0/1:27,1:28:53.56:54,0,604	0/0:19,0:18:42.55:0,43,494	0/0:6,0:6:18.06:0,18,221
chr10	20335712	.	ATT	A	9296.18	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-15.310;DP=581;FS=8.212;HRun=11;HaplotypeScore=94.8511;InbreedingCoeff=0.9837;MQ=70.25;MQ0=4;MQRankSum=0.220;QD=24.99;ReadPosRankSum=0.671;VQSLOD=4.2707;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:1,0:31:64.88:0,65,222	0/0:3,0:12:14.70:0,15,50	0/0:22,0:15:29.30:0,29,433	0/0:12,0:10:17.97:0,18,198	0/0:2,0:22:44.46:0,44,152	1/1:2,20:22:54.13:575,54,0	1/1:4,23:27:69.16:732,69,0	1/1:6,28:33:81.19:860,81,0	0/0:4,0:23:37.94:0,38,166	1/1:4,20:24:59.91:637,60,0	1/1:1,14:15:39.08:413,39,0	1/1:2,15:17:42.09:447,42,0	1/1:2,17:19:48.12:511,48,0	1/1:1,9:10:27.07:285,27,0	0/0:5,0:23:48.68:0,49,274	1/1:1,9:10:24.06:255,24,0	1/1:5,42:46:99:1149,108,0	1/1:3,15:17:44.91:478,45,0	1/1:13,23:36:66.06:692,66,0	1/1:1,17:18:39.08:414,39,0	1/1:5,15:20:45.09:479,45,0	1/1:1,16:17:39.06:415,39,0	1/1:1,16:18:47.76:476,48,0	1/1:2,18:19:45.11:478,45,0	0/0:4,0:25:45.39:0,45,165	0/0:4,0:17:38.08:0,38,183	0/0:3,0:14:19.96:0,20,69	0/0:2,0:7:7.49:0,7,26
chr10	20336536	.	T	TC	6337.76	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-0.923;DP=574;FS=7.268;HRun=8;HaplotypeScore=78.3630;InbreedingCoeff=0.9591;MQ=79.00;MQ0=14;MQRankSum=-3.498;QD=17.27;ReadPosRankSum=1.797;VQSLOD=4.6783;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:26.48:0,26,382	0/0:11,0:11:24:0,24,219	0/0:32,0:28:37.67:0,38,467	0/0:22,0:18:35.94:0,36,312	0/0:11,0:11:30.01:0,30,273	1/1:2,12:12:24.07:275,24,0	1/1:3,24:27:48.14:554,48,0	0/0:25,0:25:35.98:0,36,329	1/1:19,0:19:21.01:127,21,0	1/1:4,12:15:27.08:312,27,0	1/1:4,13:17:21.05:232,21,0	1/1:3,18:20:27.55:313,28,0	1/1:5,22:26:39.12:450,39,0	1/1:4,20:24:33.10:380,33,0	1/1:4,2:27:17.04:87,17,0	1/1:3,13:14:33.10:380,33,0	1/1:3,24:24:51.15:588,51,0	1/1:1,3:4:6.02:69,6,0	1/1:5,11:16:9.07:296,9,0	1/1:2,9:11:24.03:262,24,0	1/1:6,28:32:39.12:449,39,0	1/1:3,16:18:8.43:353,8,0	1/1:1,12:12:26.86:311,27,0	1/1:4,30:34:78.23:900,78,0	0/0:20,0:20:48.01:0,48,436	0/0:19,0:19:14.19:0,14,376	0/0:23,0:23:63.03:0,63,576	0/0:15,0:15:42.02:0,42,384
chr10	20336543	.	C	CCCC	890.40	PASS	AB=1.000;AC=34;AF=0.607;AN=56;BaseQRankSum=12.752;DP=610;FS=17.434;HRun=6;HaplotypeScore=127.2281;InbreedingCoeff=0.8175;MQ=76.46;MQ0=15;MQRankSum=-3.308;QD=2.37;ReadPosRankSum=2.937;VQSLOD=-0.3819;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:21.66:0,22,522	0/0:11,0:11:24.04:0,24,313	0/0:39,0:34:52.53:0,53,689	0/0:33,0:26:33.62:0,34,375	0/0:13,0:13:30.05:0,30,363	1/1:17,0:15:14.22:47,14,0	1/1:28,0:28:21.14:51,21,0	0/0:23,0:23:36.02:0,36,459	1/1:1,3:21:21.34:287,21,0	1/1:16,0:15:12.56:32,13,0	1/1:16,0:16:13.57:71,14,0	1/1:20,0:19:12.10:27,12,0	1/1:28,0:27:15.96:35,16,0	1/1:21,0:21:12.94:29,13,0	1/1:26,0:26:17.93:138,18,0	1/1:15,0:13:16.41:44,16,0	1/1:26,0:23:21.18:46,21,0	1/1:4,0:4:2.49:5,2,0	0/1:15,0:15:4.78:69,0,5	1/1:11,0:11:11.69:40,12,0	1/1:34,0:32:20.40:60,20,0	0/1:25,0:24:13.47:13,0,22	1/1:14,0:13:12.50:37,12,0	1/1:39,0:38:32.61:76,33,0	0/0:22,0:22:47.85:0,48,570	0/0:24,0:24:40.01:0,40,580	0/0:26,0:26:63.17:0,63,810	0/0:16,0:16:42.13:0,42,551
chr10	20339185	.	GGTGTGTGTGTGTGT	G	10730.24	PASS	AB=0.778;AC=26;AF=0.481;AN=54;BaseQRankSum=2.219;DP=652;FS=5.902;HRun=0;HaplotypeScore=240.6519;InbreedingCoeff=0.6202;MQ=60.61;MQ0=21;MQRankSum=-6.897;QD=32.81;ReadPosRankSum=-0.576;VQSLOD=3.5943;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:23:24.08:0,24,633	0/0:5,0:7:15.05:0,15,505	1/1:43,0:17:1.25:3,1,0	0/0:60,0:22:0:0,0,0	0/0:17,0:23:24.01:0,24,788	0/1:12,8:20:42.82:1091,0,43	1/1:14,2:15:9.03:299,9,0	0/0:26,0:25:21.95:0,22,480	0/0:13,0:20:30.10:0,30,679	1/1:9,15:24:39.10:1146,39,0	1/1:7,6:13:18:512,18,0	1/1:10,10:22:35.87:1278,36,0	1/1:15,7:22:18.06:608,18,0	0/1:21,8:27:40.68:867,0,41	0/0:20,0:20:23.71:0,24,1206	1/1:10,10:21:27.09:990,27,0	0/1:16,10:25:36.33:932,0,36	1/1:8,9:17:21.07:823,21,0	0/1:10,1:10:3.53:112,0,4	1/1:9,7:16:18.06:614,18,0	0/0:25,10:35:0.47:0,0,1	1/1:16,6:22:6.33:540,6,0	1/1:14,5:20:31.65:915,32,0	./.	0/0:24,0:31:51.18:0,51,1533	0/0:11,0:20:33.11:0,33,1023	0/0:14,0:19:30.10:0,30,934	0/0:8,0:11:15.05:0,15,474
chr10	20339440	.	GCTTCCGAAATT	G	12302.65	PASS	AB=0.509;AC=13;AF=0.232;AN=56;BaseQRankSum=16.268;DP=737;FS=10.471;HRun=0;HaplotypeScore=238.9137;InbreedingCoeff=0.8931;MQ=87.07;MQ0=0;MQRankSum=-15.808;QD=72.37;ReadPosRankSum=3.213;VQSLOD=3.1754;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,38:43:87.29:2711,87,0	1/1:1,11:12:23.81:778,24,0	0/0:31,0:31:87.28:0,87,4098	0/0:25,0:25:63.22:0,63,3039	1/1:1,25:26:39.13:1320,39,0	0/0:20,0:20:60.20:0,60,3094	0/0:23,0:23:69.22:0,69,3428	0/0:36,0:36:99:0,108,5515	0/0:26,0:26:75.26:0,75,4004	0/0:25,0:25:75.21:0,75,3778	0/0:23,0:23:69.24:0,69,3904	0/0:26,0:26:78.26:0,78,3993	0/0:26,0:26:78.22:0,78,3848	0/0:27,0:27:81.28:0,81,4426	0/0:28,0:28:81.28:0,81,4335	0/0:25,0:25:75.26:0,75,3950	0/0:32,0:32:96.33:0,96,4891	0/0:33,0:33:93.32:0,93,5132	0/0:28,0:28:84.29:0,84,4438	0/0:18,0:18:54.19:0,54,2931	0/0:24,0:24:66.23:0,66,3637	0/0:22,0:22:63.21:0,63,3323	0/0:23,0:23:66.23:0,66,3557	0/0:46,0:46:99:0,135,7097	1/1:4,23:27:60.19:2068,60,0	0/1:1,28:29:85.89:2823,0,86	1/1:2,25:27:63.22:2175,63,0	1/1:0,6:6:12.04:428,12,0
chr10	20340116	.	ACT	A	1320.47	PASS	AB=0.989;AC=18;AF=0.321;AN=56;BaseQRankSum=11.758;DP=481;FS=5.290;HRun=0;HaplotypeScore=114.5927;InbreedingCoeff=-0.2838;MQ=70.08;MQ0=1;MQRankSum=-0.885;QD=3.83;ReadPosRankSum=10.749;VQSLOD=0.3449;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:37.31:0,37,368	0/0:7,0:7:13.01:0,13,142	0/0:7,0:7:17.52:0,18,182	0/0:13,0:12:23.99:0,24,358	0/0:11,0:11:32.12:0,32,204	0/1:9,0:9:12.03:12,0,102	0/1:32,0:32:24.45:149,0,24	0/0:16,0:16:44.61:0,45,373	0/0:11,0:11:14.03:0,14,135	0/1:21,0:21:90.34:111,0,90	0/1:11,0:11:11.26:11,0,57	0/1:21,1:22:36.68:98,0,37	0/1:17,0:17:11.61:91,0,12	0/1:14,0:14:41.17:82,0,41	0/0:12,0:12:23.34:0,23,356	0/1:21,0:21:69.04:69,0,99	0/1:36,0:36:19.31:159,0,19	0/1:30,1:30:47.54:145,0,48	0/1:14,0:14:49.90:50,0,95	0/1:18,1:19:60.69:85,0,61	1/1:34,1:35:19.23:160,19,0	0/1:18,1:19:38.28:91,0,38	0/1:15,0:15:41.86:60,0,42	0/1:21,0:21:14.26:109,0,14	0/1:8,0:8:0.51:1,0,77	0/0:12,0:12:15.01:0,15,148	0/0:13,0:13:15.13:0,15,176	0/0:3,0:3:8.80:0,9,57
chr10	20340118	.	TCC	T	7376.55	PASS	AB=0.671;AC=38;AF=0.679;AN=56;BaseQRankSum=-0.463;DP=465;FS=4.077;HRun=11;HaplotypeScore=92.6033;InbreedingCoeff=0.4604;MQ=71.45;MQ0=1;MQRankSum=-3.571;QD=18.30;ReadPosRankSum=4.629;VQSLOD=4.1296;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:18,4:28:49.46:100,0,49	0/1:4,1:7:15.48:15,0,57	0/0:6,0:6:7.54:0,8,71	0/0:15,0:14:19.90:0,20,268	0/0:7,0:11:22.87:0,23,91	1/1:4,4:8:9.01:96,9,0	1/1:4,26:32:65.60:662,66,0	0/0:11,0:17:12.05:0,12,65	0/1:3,2:11:24.30:45,0,24	1/1:6,15:21:45.08:479,45,0	1/1:5,5:10:11.91:128,12,0	1/1:4,15:19:36.08:383,36,0	1/1:2,13:15:36.09:383,36,0	1/1:4,9:14:32.79:330,33,0	0/0:9,0:10:17.33:0,17,248	1/1:6,13:20:41.83:426,42,0	1/1:3,32:35:87.21:926,87,0	1/1:6,25:30:63.13:670,63,0	1/1:5,7:13:22.66:233,23,0	1/1:5,14:19:36.06:383,36,0	1/1:3,32:35:81.20:862,81,0	1/1:4,15:19:33.07:351,33,0	1/1:3,12:15:26.60:287,27,0	1/1:2,17:20:47.86:491,48,0	0/1:3,1:9:27.57:34,0,28	0/1:7,2:9:8.66:53,0,9	0/1:4,1:13:39.55:40,0,52	0/0:1,0:3:4.99:0,5,17
chr10	20340128	.	CCA	C	1569.92	PASS	AB=0.984;AC=25;AF=0.446;AN=56;BaseQRankSum=10.868;DP=453;FS=8.386;HRun=0;HaplotypeScore=103.1269;InbreedingCoeff=-0.3000;MQ=69.89;MQ0=1;MQRankSum=-2.542;QD=4.04;ReadPosRankSum=10.426;VQSLOD=-0.0730;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:25:68.84:69,0,178	0/1:6,0:6:9.18:10,0,9	0/0:6,0:6:1.34:0,1,86	0/1:13,0:12:9.58:10,0,165	0/0:11,0:11:0.75:0,1,52	1/1:4,0:4:6.96:23,7,0	1/1:29,0:29:19.71:180,20,0	0/0:12,0:12:2.66:0,3,144	0/0:11,0:11:8.07:0,8,109	0/1:18,0:18:5:102,0,5	0/1:8,1:9:20.14:20,0,65	0/1:20,0:20:34.76:83,0,35	0/1:16,0:16:22.52:99,0,23	0/1:12,1:13:16.83:92,0,17	0/0:8,0:8:17.06:0,17,174	1/1:14,1:15:32.46:142,32,0	0/1:37,0:37:30.65:173,0,31	0/1:31,1:31:25.88:151,0,26	0/1:13,0:13:53.64:54,0,80	1/1:15,0:15:12.25:78,12,0	0/1:44,0:44:99:116,0,118	0/1:18,0:18:14.66:89,0,15	0/1:15,0:15:55.29:55,0,57	0/1:23,0:23:60.63:104,0,61	0/0:13,0:13:10.72:0,11,103	0/1:12,0:12:72.80:73,0,104	0/1:11,1:12:10.98:11,0,81	0/0:3,0:3:8.67:0,9,52
chr10	20340289	.	TG	T	2574.88	PASS	AB=0.630;AC=13;AF=0.232;AN=56;BaseQRankSum=6.379;DP=586;FS=1.291;HRun=10;HaplotypeScore=71.0915;InbreedingCoeff=0.9192;MQ=74.29;MQ0=1;MQRankSum=-0.722;QD=17.88;ReadPosRankSum=4.405;VQSLOD=4.2485;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:12,40:52:99:937,108,0	1/1:0,14:14:38.99:339,39,0	0/0:12,0:12:29.90:0,30,275	0/0:23,0:20:5.48:0,5,174	1/1:4,10:14:29.47:244,29,0	0/0:13,0:13:30.06:0,30,317	0/0:30,0:30:81.11:0,81,843	0/0:3,0:12:28.71:0,29,168	0/0:5,0:19:25.57:0,26,128	0/0:19,0:19:24.06:0,24,266	0/0:12,0:12:18.04:0,18,192	0/0:29,0:29:75.15:0,75,801	0/0:24,0:24:51.13:0,51,556	0/0:24,0:24:57.14:0,57,621	0/0:6,0:20:37.26:0,37,223	0/0:16,0:16:43.35:0,43,460	0/0:44,0:44:99:0,108,1174	0/0:21,1:22:34.06:0,34,590	0/0:12,0:13:21.93:0,22,224	0/0:12,0:12:24.06:0,24,265	0/0:44,3:47:15.02:0,15,797	0/0:9,0:9:21.05:0,21,222	0/0:17,0:17:24.05:0,24,257	0/0:23,1:24:31.09:0,31,564	1/1:5,14:19:19.77:339,20,0	0/1:7,10:17:0.19:227,0,0	1/1:1,21:22:59.99:521,60,0	1/1:0,6:6:18:156,18,0
chr10	20341944	.	G	GTTC	442.87	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.389;DP=727;FS=9.443;HRun=0;HaplotypeScore=107.7451;InbreedingCoeff=0.9915;MQ=88.26;MQ0=0;MQRankSum=-5.435;QD=44.29;ReadPosRankSum=2.260;VQSLOD=4.8664;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,123,2225	0/0:6,0:6:18.06:0,18,336	0/0:30,0:30:87.18:0,87,1510	0/0:22,0:22:56.73:0,57,979	0/0:20,0:20:57.20:0,57,1060	0/0:26,0:26:78.24:0,78,1391	0/0:19,0:19:57.20:0,57,1062	0/0:26,0:26:75.26:0,75,1398	1/1:0,9:10:30.10:537,30,0	0/0:28,0:28:81.26:0,81,1454	0/0:18,0:18:54.17:0,54,976	0/0:29,0:29:87.30:0,87,1620	0/0:25,0:25:75.26:0,75,1398	0/0:38,0:38:99:0,114,2125	0/0:36,0:36:99:0,105,1957	0/0:43,0:43:99:0,126,2286	0/0:40,0:40:99:0,117,2147	0/0:30,0:30:87.30:0,87,1622	0/0:26,0:26:75.26:0,75,1392	0/0:15,0:15:42.13:0,42,752	0/0:39,0:39:99:0,108,1973	0/0:19,0:19:57.20:0,57,1059	0/0:16,0:16:48.16:0,48,894	0/0:31,0:31:90.25:0,90,1596	0/0:17,0:17:48.16:0,48,895	0/0:28,0:28:84.29:0,84,1554	0/0:34,0:34:99:0,99,1845	0/0:15,0:15:45.15:0,45,839
chr10	20341945	.	A	AGCTTCGCTGTC	2038.46	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=6.494;DP=735;FS=9.093;HRun=0;HaplotypeScore=231.4261;InbreedingCoeff=0.6443;MQ=88.69;MQ0=0;MQRankSum=-6.631;QD=31.85;ReadPosRankSum=1.741;VQSLOD=1.8642;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,120,4348	0/0:6,0:6:18.06:0,18,667	0/0:30,0:30:87.19:0,87,2609	0/0:24,0:24:56.97:0,57,1619	0/0:19,0:19:57.20:0,57,2125	0/0:26,0:26:78.27:0,78,2576	0/0:19,0:19:57.20:0,57,2051	0/0:27,0:27:75.26:0,75,2750	1/1:12,9:21:42.14:2114,42,0	0/0:27,0:27:78.27:0,78,2776	0/0:17,0:17:51.18:0,51,1877	0/0:29,0:29:87.30:0,87,3092	0/0:25,0:25:75.26:0,75,2784	0/0:38,0:38:99:0,114,4192	0/0:36,0:36:99:0,105,3910	0/1:43,0:43:30.54:31,0,4316	0/0:39,0:39:99:0,117,4174	0/0:29,0:29:87.30:0,87,3214	0/0:27,0:27:78.24:0,78,2713	0/0:14,0:14:42.13:0,42,1421	0/0:39,0:39:99:0,117,3757	0/0:19,0:19:57.20:0,57,2114	0/0:16,0:16:48.16:0,48,1702	0/0:30,0:30:90.29:0,90,3147	0/0:17,0:17:48.16:0,48,1763	0/0:29,0:29:87.30:0,87,3130	0/0:34,0:34:99:0,102,3676	0/0:15,0:15:45.15:0,45,1651
chr10	20342015	.	AATAGTGGCC	A	627.46	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.555;DP=644;FS=1.349;HRun=0;HaplotypeScore=171.3821;InbreedingCoeff=0.9900;MQ=74.21;MQ0=0;MQRankSum=-4.809;QD=41.83;ReadPosRankSum=1.306;VQSLOD=3.6623;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,99,4023	0/0:7,0:7:21.07:0,21,915	0/0:10,0:10:30.07:0,30,911	0/0:12,0:12:27.52:0,28,744	0/0:24,0:24:66.21:0,66,2568	0/0:22,0:22:60.21:0,60,2621	0/0:23,0:23:69.24:0,69,3254	0/0:34,0:34:90.30:0,90,3057	1/1:2,13:15:24.08:721,24,0	0/0:23,0:23:66.23:0,66,2713	0/0:11,0:11:33.11:0,33,1392	0/0:22,0:22:66.23:0,66,3204	0/0:22,0:22:66.21:0,66,3085	0/0:36,0:36:99:0,108,5083	0/0:25,0:25:75.22:0,75,3211	0/0:21,0:20:54.17:0,54,2354	0/0:30,0:30:87.30:0,87,4298	0/0:37,0:37:99:0,105,4668	0/0:27,0:27:81.26:0,81,3182	0/0:19,0:19:57.18:0,57,2226	0/0:50,0:50:99:0,147,5728	0/0:21,0:21:57.18:0,57,2550	0/0:11,0:11:33.11:0,33,1348	0/0:35,0:35:99:0,99,4403	0/0:15,0:15:42.14:0,42,1831	0/0:22,0:22:60.20:0,60,2442	0/0:27,0:27:81.28:0,81,3766	0/0:8,0:8:24.08:0,24,1178
chr10	20343170	.	G	GGTCAGTTGCTTACCTTA	5948.47	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=1.483;DP=711;FS=6.224;HRun=0;HaplotypeScore=308.6888;InbreedingCoeff=0.9914;MQ=86.33;MQ0=0;MQRankSum=-8.657;QD=198.28;ReadPosRankSum=-0.289;VQSLOD=4.2896;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,102,4679	0/0:10,0:10:30.09:0,30,1305	0/0:32,0:32:93.32:0,93,3674	0/0:26,0:27:62.02:0,62,2252	0/0:18,0:18:51.18:0,51,2365	0/0:17,0:17:48.15:0,48,1975	0/0:27,0:27:75.26:0,75,3216	0/0:24,0:24:69.22:0,69,2982	1/1:17,10:30:81.28:5948,81,0	0/0:27,0:27:81.26:0,81,3549	0/0:15,0:15:42.14:0,42,1978	0/0:25,0:25:75.26:0,75,3688	0/0:28,0:28:84.29:0,84,4104	0/0:30,0:30:87.28:0,87,4181	0/0:40,0:40:99:0,114,5399	0/0:35,0:35:99:0,99,4721	0/0:37,0:37:99:0,102,4837	0/0:22,0:22:63.22:0,63,2990	0/0:30,0:30:90.31:0,90,3985	0/0:21,0:21:63.22:0,63,3026	0/0:22,0:22:63.22:0,63,2961	0/0:13,0:13:36.12:0,36,1669	0/0:22,0:21:63.22:0,63,3030	0/0:33,0:33:96.31:0,96,4242	0/0:24,0:24:72.25:0,72,3499	0/0:25,0:25:69.24:0,69,3224	0/0:34,0:33:99:0,99,4446	0/0:6,0:6:18.06:0,18,905
chr10	20345534	.	G	GA	632.23	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-3.927;DP=670;FS=0.000;HRun=8;HaplotypeScore=63.4377;InbreedingCoeff=0.9873;MQ=71.41;MQ0=0;MQRankSum=-2.533;QD=24.32;ReadPosRankSum=-1.632;VQSLOD=3.5863;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:51.02:0,51,467	0/0:9,0:9:20.02:0,20,214	0/0:14,0:14:21.54:0,22,201	0/0:15,0:15:21.82:0,22,207	0/0:45,0:45:99:0,123,1115	0/0:25,0:26:77.07:0,77,688	0/0:15,0:15:41.99:0,42,376	0/0:32,0:32:75.03:0,75,686	1/1:4,22:26:63.19:727,63,0	0/0:21,0:21:63.02:0,63,569	0/0:22,0:22:57.02:0,57,518	0/0:22,0:22:59.99:0,60,539	0/0:31,0:31:84.04:0,84,769	0/0:27,0:27:78.04:0,78,714	0/0:27,0:27:78.03:0,78,710	0/0:15,0:15:39.02:0,39,357	0/0:29,0:29:84.03:0,84,763	0/0:21,0:21:57.03:0,57,520	0/0:18,0:18:48.03:0,48,439	0/0:35,0:36:95.07:0,95,851	0/0:13,0:13:30.01:0,30,275	0/0:34,0:34:99:0,99,906	0/0:21,0:21:54.02:0,54,494	0/0:14,0:14:36:0,36,324	0/0:27,0:27:75.04:0,75,686	0/0:34,0:34:87.03:0,87,792	0/0:39,0:39:99:0,108,988	0/0:18,0:18:51.02:0,51,467
chr10	20345944	.	AT	A	15851.49	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=8.955;DP=736;FS=0.894;HRun=1;HaplotypeScore=120.6318;InbreedingCoeff=1.0000;MQ=85.84;MQ0=0;MQRankSum=-1.006;QD=38.95;ReadPosRankSum=6.080;VQSLOD=4.1693;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:57.19:0,57,900	0/0:14,0:14:42.14:0,42,671	0/0:24,0:25:60.12:0,60,989	0/0:28,0:28:81.19:0,81,1208	0/0:31,0:31:93.28:0,93,1426	1/1:0,26:26:78.26:1091,78,0	1/1:0,15:14:42.14:587,42,0	0/0:45,0:45:99:0,129,1986	0/0:26,0:25:63.21:0,63,1005	1/1:0,43:43:99:1719,126,0	1/1:0,37:37:99:1427,102,0	1/1:0,22:22:57.19:796,57,0	1/1:0,36:36:99:1384,99,0	1/1:0,17:17:48.16:671,48,0	0/0:29,0:29:72.24:0,72,1136	1/1:0,32:32:87.29:1216,87,0	1/1:0,23:23:66.22:922,66,0	1/1:0,16:16:45.15:629,45,0	1/1:0,25:25:75.25:1036,75,0	1/1:0,29:29:87.25:1194,87,0	1/1:0,20:20:51.13:691,51,0	1/1:0,18:18:51.17:713,51,0	1/1:1,28:29:84.15:1148,84,0	1/1:0,19:19:48.07:627,48,0	0/0:33,0:33:75.21:0,75,1126	0/0:32,0:32:96.33:0,96,1542	0/0:28,0:28:69.19:0,69,1035	0/0:19,0:19:48.16:0,48,763
chr10	20345971	.	T	TATAC	8285.66	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-13.238;DP=730;FS=5.050;HRun=0;HaplotypeScore=201.9604;InbreedingCoeff=0.9150;MQ=68.87;MQ0=1;MQRankSum=-2.557;QD=29.38;ReadPosRankSum=-3.874;VQSLOD=3.5291;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:11,7:18:27.09:617,27,0	1/1:7,5:12:18.06:429,18,0	0/0:23,0:17:3.47:0,3,28	0/0:16,0:14:3:0,3,27	1/1:15,12:27:45.11:979,45,0	0/0:32,0:32:63.20:0,63,974	0/0:21,0:19:21.05:0,21,304	1/1:48,0:47:42.13:685,42,0	1/1:18,0:19:3.01:66,3,0	0/0:41,0:41:75.26:0,75,1183	0/0:33,0:33:51.17:0,51,800	0/0:26,0:26:33.10:0,33,490	0/0:30,0:30:33.11:0,33,508	0/0:20,0:20:33.11:0,33,519	1/1:18,1:31:33.11:573,33,0	0/0:35,0:35:57.18:0,57,874	0/0:20,0:20:33.07:0,33,481	0/0:13,0:13:12.03:0,12,170	0/0:22,0:22:21.07:0,21,331	0/0:25,0:25:36.12:0,36,567	0/0:29,0:29:45.04:0,45,706	0/0:13,0:13:18.06:0,18,285	0/0:33,0:33:69.23:0,69,1075	0/0:16,0:14:18.04:0,18,257	1/1:10,26:37:48.16:1144,48,0	1/1:11,22:34:72.21:1584,72,0	1/1:10,22:33:59.42:1351,59,0	1/1:7,15:23:36.12:858,36,0
chr10	20346065	.	ATGTG	A	9046.13	PASS	AB=0.748;AC=32;AF=0.593;AN=54;BaseQRankSum=-0.528;DP=938;FS=0.758;HRun=0;HaplotypeScore=212.2505;InbreedingCoeff=0.6350;MQ=40.85;MQ0=74;MQRankSum=6.126;QD=14.90;ReadPosRankSum=3.279;VQSLOD=4.5690;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:27:24.49:0,24,102	0/1:5,0:11:20.71:21,0,35	./.	0/0:18,0:7:16.30:0,16,136	0/0:14,0:29:38.94:0,39,187	1/1:11,8:15:18.06:306,18,0	1/1:24,9:24:6.47:78,6,0	0/0:82,0:61:66.91:0,67,1330	1/1:23,6:26:15.12:199,15,0	0/1:40,15:42:99:1080,0,159	1/1:19,13:30:42.60:690,43,0	1/1:20,15:32:35.50:488,35,0	1/1:32,16:44:69.38:893,69,0	1/1:32,8:36:36.05:472,36,0	0/0:32,0:27:42.11:0,42,609	1/1:20,15:34:45.15:769,45,0	1/1:21,11:26:24.87:372,25,0	0/1:20,5:22:99:270,0,156	0/1:23,11:25:21.90:706,0,22	1/1:17,14:31:4.17:744,4,0	1/1:48,14:53:48.50:821,48,0	1/1:15,8:20:33.09:510,33,0	1/1:6,7:11:9.03:158,9,0	1/1:17,8:23:30.08:471,30,0	0/0:10,0:26:52.40:0,52,233	0/0:24,0:35:32.79:0,33,239	0/0:14,1:28:10.91:0,11,188	0/0:18,0:24:10.73:0,11,180
chr10	20346079	.	ATG	A	1318.99	PASS	AB=0.977;AC=24;AF=0.462;AN=52;BaseQRankSum=3.032;DP=1046;FS=6.252;HRun=0;HaplotypeScore=248.6031;InbreedingCoeff=-0.1240;MQ=36.20;MQ0=120;MQRankSum=0.984;QD=1.71;ReadPosRankSum=6.583;VQSLOD=1.1570;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:31:15.74:0,16,61	0/1:13,1:12:21.32:23,0,21	./.	./.	0/0:36,0:33:31.62:0,32,124	1/1:27,1:23:5.66:22,6,0	0/0:35,0:21:2.53:0,3,17	0/1:69,24:59:99:646,0,461	0/1:37,1:27:0.25:15,0,0	0/1:67,0:46:72.07:72,0,277	0/1:38,1:35:10.91:11,0,31	1/1:41,0:33:7.25:26,7,0	0/1:45,0:38:51.21:51,0,56	0/1:37,0:37:7.85:8,0,10	1/1:31,11:35:24.06:292,24,0	0/1:42,0:36:25.12:25,0,43	0/1:32,0:25:1.97:44,0,2	0/1:28,0:25:46.83:47,0,190	0/1:31,0:22:85.45:85,0,161	0/1:36,0:33:20.32:20,0,80	0/1:74,0:58:13.29:13,0,64	1/1:29,0:28:7.46:27,7,0	1/1:16,0:13:5.98:17,6,0	0/1:26,0:22:13.87:31,0,14	0/0:34,1:33:43.50:0,44,186	0/0:55,0:40:61.80:0,62,454	0/0:37,0:34:0.50:0,1,135	0/0:30,0:28:3.78:0,4,234
chr10	20346093	.	A	ATG	6478.21	PASS	AB=0.766;AC=24;AF=0.462;AN=52;BaseQRankSum=-0.021;DP=1076;FS=3.123;HRun=0;HaplotypeScore=259.2385;InbreedingCoeff=0.4526;MQ=35.01;MQ0=135;MQRankSum=7.072;QD=10.71;ReadPosRankSum=-0.215;VQSLOD=4.4393;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:34:14.19:0,14,193	0/0:16,0:14:12.16:0,12,136	./.	./.	0/0:41,0:37:20.89:0,21,259	1/1:20,12:27:29.67:458,30,0	0/0:39,7:29:5.61:0,6,54	0/0:98,0:60:89.35:0,89,939	0/0:38,0:27:8.34:0,8,62	0/1:63,13:48:99:749,0,216	1/1:29,12:36:29.89:418,30,0	1/1:26,18:35:29.85:490,30,0	0/1:27,18:38:24.05:567,0,24	1/1:25,11:33:5.90:101,6,0	0/0:42,0:34:24.08:0,24,297	1/1:20,20:34:29.86:448,30,0	1/1:24,8:25:13.92:313,14,0	0/1:23,7:26:99:336,0,123	0/1:18,9:19:32.95:468,0,33	0/1:22,13:32:37.01:512,0,37	1/1:72,10:61:35.09:734,35,0	1/1:28,8:30:29.71:448,30,0	1/1:9,9:15:11.88:175,12,0	0/1:19,10:25:21.52:259,0,22	0/0:34,0:32:2.78:0,3,354	0/0:61,0:42:80.91:0,81,878	0/0:36,0:33:43.84:0,44,496	0/0:23,0:21:42.03:0,42,377
chr10	20346119	.	GTGTGTGTA	G	5971.42	PASS	AB=0.968;AC=29;AF=0.558;AN=52;BaseQRankSum=-8.057;DP=1124;FS=31.845;HRun=0;HaplotypeScore=288.3137;InbreedingCoeff=-0.5609;MQ=35.50;MQ0=166;MQRankSum=6.725;QD=5.95;ReadPosRankSum=-2.631;VQSLOD=2.3138;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:20,19:37:4.81:125,5,0	0/1:12,2:12:53.47:104,0,53	./.	./.	1/1:17,20:34:2.60:24,3,0	0/1:39,0:35:36.81:38,0,37	0/1:55,0:39:44.68:45,0,132	0/0:77,0:31:51.89:0,52,488	0/0:42,0:31:4.41:0,4,125	0/1:94,0:53:99:288,0,902	0/1:35,0:30:27.96:188,0,28	0/1:43,0:34:34.31:34,0,76	0/1:54,0:45:78.29:547,0,78	0/1:42,0:38:19.27:238,0,19	0/1:47,0:37:36.30:36,0,186	0/1:40,0:32:80.54:127,0,81	0/1:34,0:27:88.37:88,0,147	0/1:32,0:28:99:152,0,479	0/1:32,0:22:99:135,0,135	0/1:38,0:36:99:147,0,216	0/1:86,0:58:49.64:213,0,50	1/1:40,0:33:12.49:115,12,0	1/1:21,0:18:5.74:35,6,0	0/1:30,0:25:54.39:54,0,75	1/1:20,8:26:35.42:801,35,0	0/1:62,4:46:99:1213,0,775	0/1:29,6:31:47.74:751,0,48	0/1:14,9:21:99:472,0,288
chr10	20346125	.	GTA	G	818.07	PASS	AB=0.995;AC=19;AF=0.365;AN=52;BaseQRankSum=-3.499;DP=1116;FS=3.371;HRun=0;HaplotypeScore=253.2836;InbreedingCoeff=-0.2166;MQ=35.88;MQ0=163;MQRankSum=0.827;QD=1.15;ReadPosRankSum=-6.811;VQSLOD=0.3272;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:37,0:35:7.49:54,7,0	0/0:14,0:12:1.86:0,2,67	./.	./.	1/1:36,0:33:2.58:25,3,0	0/0:37,0:33:29.84:0,30,283	0/0:50,0:39:15.47:0,15,157	0/1:75,1:30:32.23:32,0,294	0/1:37,0:29:3.67:4,0,160	0/0:90,1:52:42.60:0,43,921	0/1:36,0:31:24.10:24,0,192	0/1:45,0:36:13.23:13,0,246	0/1:55,1:47:90.77:91,0,308	0/1:41,0:37:0.33:0,0,171	0/1:49,0:39:27.34:27,0,153	0/1:42,0:34:33.76:34,0,233	0/1:31,1:25:3.31:3,0,260	0/1:37,0:33:78.93:79,0,631	0/0:33,0:21:17.72:0,18,322	0/0:37,0:35:49.93:0,50,491	0/0:82,1:58:39.06:0,39,380	0/0:38,0:31:21:0,21,207	0/0:21,0:18:9.02:0,9,91	0/1:28,0:23:5.33:5,0,106	0/1:29,0:27:2.54:131,0,3	0/1:69,1:49:99:210,0,539	0/1:32,0:28:54.28:54,0,108	0/1:27,0:25:99:179,0,200
chr10	20346127	.	A	ATG	9648.92	PASS	AB=0.828;AC=39;AF=0.750;AN=52;BaseQRankSum=-7.239;DP=1113;FS=19.476;HRun=0;HaplotypeScore=224.6245;InbreedingCoeff=-0.1405;MQ=36.20;MQ0=159;MQRankSum=5.771;QD=9.00;ReadPosRankSum=-2.594;VQSLOD=2.8196;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:39,0:37:2.94:44,3,0	0/1:12,2:12:24.12:93,0,24	./.	./.	0/1:33,0:32:0.23:0,0,0	1/1:12,23:33:17.76:393,18,0	0/1:30,17:40:27.16:137,0,27	1/1:68,0:29:3.20:251,3,0	0/0:32,0:29:4.90:0,5,124	0/1:73,12:50:99:861,0,170	1/1:24,9:30:30.50:433,31,0	1/1:27,13:35:28.89:426,29,0	1/1:34,13:47:73.06:973,73,0	1/1:28,8:37:26.97:442,27,0	1/1:29,9:39:15.04:217,15,0	0/1:29,13:36:5.29:412,0,5	0/1:28,3:25:79.13:189,0,79	0/1:24,12:33:99:753,0,117	1/1:20,10:19:20.99:454,21,0	0/1:15,20:35:27.21:531,0,27	1/1:64,13:57:28.31:544,28,0	1/1:20,17:34:20.75:351,21,0	1/1:8,11:18:8.91:150,9,0	1/1:19,8:25:4.23:130,4,0	1/1:22,6:27:42.11:625,42,0	0/1:65,3:49:99:653,0,277	0/1:25,7:28:28.85:386,0,29	0/1:25,0:25:99:200,0,112
chr10	20346153	.	ATG	A	201.96	PASS	AB=0.992;AC=5;AF=0.089;AN=56;BaseQRankSum=0.948;DP=1069;FS=4.811;HRun=0;HaplotypeScore=223.2985;InbreedingCoeff=0.2153;MQ=41.53;MQ0=100;MQRankSum=-1.770;QD=1.32;ReadPosRankSum=-1.184;VQSLOD=2.4118;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:38,1:37:55.68:56,0,190	0/0:10,0:9:6.49:0,6,98	0/0:22,0:10:7.40:0,7,186	0/0:26,0:11:20.45:0,20,314	0/0:40,0:38:25.29:0,25,378	0/0:37,0:33:5.88:0,6,587	0/1:42,0:35:2.81:3,0,341	0/0:46,0:27:14.98:0,15,628	1/1:19,14:29:5.17:238,5,0	0/0:66,0:47:80.46:0,80,1115	0/0:30,0:27:41.82:0,42,672	0/1:39,0:30:0.34:0,0,485	0/0:54,0:46:83.78:0,84,1264	0/0:42,0:39:4.54:0,5,546	0/0:41,0:35:30.10:0,30,476	0/0:42,0:35:14.78:0,15,706	0/0:29,0:24:36.39:0,36,498	0/0:46,0:42:71.56:0,72,1131	0/0:27,0:20:1.59:0,2,411	0/0:40,0:38:69.07:0,69,1091	0/0:77,0:59:39.60:0,40,627	0/0:37,0:35:38.72:0,39,622	0/0:18,0:17:12.04:0,12,185	0/0:30,0:26:32.99:0,33,514	0/0:35,0:33:23.76:0,24,882	0/0:61,0:47:78.14:0,78,1168	0/0:33,0:30:60.20:0,60,926	0/0:25,0:23:30.10:0,30,469
chr10	20346982	.	TCC	T	3929.68	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-0.875;DP=489;FS=0.416;HRun=10;HaplotypeScore=70.2121;InbreedingCoeff=0.9666;MQ=78.14;MQ0=0;MQRankSum=-0.694;QD=22.58;ReadPosRankSum=6.396;VQSLOD=2.7745;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,34:35:69.19:769,69,0	1/1:1,3:4:9.02:100,9,0	0/0:19,0:15:33.11:0,33,503	0/0:18,0:19:32.26:0,32,393	1/1:2,21:23:60.16:669,60,0	0/0:24,0:25:61.32:0,61,651	0/0:17,0:18:37.69:0,38,462	1/1:8,14:22:30.02:333,30,0	0/0:11,0:11:30.09:0,30,435	0/0:14,0:16:25.90:0,26,287	0/0:15,0:15:35.83:0,36,462	0/0:18,0:18:51.06:0,51,635	0/0:11,0:11:27.08:0,27,369	0/0:12,0:14:29.58:0,30,415	1/1:3,27:30:61.15:729,61,0	0/0:17,0:18:45.46:0,45,559	0/0:17,0:21:50:0,50,522	0/0:22,0:22:57.15:0,57,795	0/0:15,0:15:21.05:0,21,287	0/0:8,0:8:12.02:0,12,164	0/0:21,0:22:51.09:0,51,685	0/0:13,0:13:20.05:0,20,204	0/0:8,0:8:11.40:0,11,150	0/0:22,0:22:53.19:0,53,747	1/1:4,14:18:36.05:400,36,0	1/1:4,15:19:8.49:436,8,0	1/1:3,11:14:18.04:193,18,0	1/1:0,9:9:27.07:301,27,0
chr10	20347490	.	GAAAA	G	4804.72	PASS	AB=0.716;AC=32;AF=0.571;AN=56;BaseQRankSum=9.310;DP=629;FS=33.265;HRun=20;HaplotypeScore=126.0114;InbreedingCoeff=0.6436;MQ=66.42;MQ0=10;MQRankSum=-2.725;QD=13.35;ReadPosRankSum=9.966;VQSLOD=-0.5206;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:34:41.24:0,41,290	0/0:5,0:7:8.77:0,9,52	0/0:45,0:21:17.29:0,17,133	0/0:24,0:8:8.01:0,8,57	0/0:24,0:26:38.24:0,38,257	1/1:9,12:22:31.65:336,32,0	1/1:9,9:21:25.23:355,25,0	0/0:37,1:40:18.02:0,18,376	0/1:12,1:17:10.50:146,0,11	1/1:4,8:13:5.35:99,5,0	1/1:6,7:14:22.69:222,23,0	1/1:7,9:16:21.70:211,22,0	1/1:11,10:24:28.18:323,28,0	1/1:8,7:16:3.24:204,3,0	0/1:17,6:22:44.26:88,0,44	0/1:10,10:21:6.17:308,0,6	0/1:15,12:28:12.29:465,0,12	1/1:11,5:19:4.47:278,4,0	1/1:17,2:23:33.14:377,33,0	1/1:16,7:23:29:358,29,0	1/1:10,12:22:13.94:232,14,0	1/1:7,4:11:14.62:148,15,0	1/1:3,12:20:34.33:348,34,0	1/1:13,10:24:13.41:307,13,0	0/0:25,0:25:29.48:0,29,273	0/0:25,0:25:40.21:0,40,293	0/0:25,0:28:61.91:0,62,433	0/0:13,0:14:29.60:0,30,219
chr10	20347508	.	A	AC	3842.97	PASS	AB=0.986;AC=35;AF=0.625;AN=56;BaseQRankSum=4.444;DP=584;FS=18.965;HRun=0;HaplotypeScore=101.8643;InbreedingCoeff=0.7707;MQ=65.09;MQ0=7;MQRankSum=-2.696;QD=10.25;ReadPosRankSum=3.494;VQSLOD=2.8480;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:10.25:0,10,167	0/0:6,0:6:8.92:0,9,69	0/0:35,0:15:12.52:0,13,227	0/1:22,0:10:5.03:5,0,27	0/0:21,0:21:32.66:0,33,303	1/1:22,0:22:41.26:237,41,0	1/1:22,2:24:54.17:331,54,0	0/0:31,0:31:55.51:0,56,409	0/0:21,0:19:24.59:0,25,215	1/1:19,0:17:40.62:326,41,0	1/1:12,0:12:12.70:122,13,0	1/1:16,0:15:23.40:135,23,0	1/1:21,0:22:37.25:209,37,0	1/1:16,0:16:16.16:179,16,0	0/0:22,0:22:35.83:0,36,286	1/1:21,1:22:18.04:237,18,0	1/1:26,0:27:70.49:432,70,0	1/1:13,0:13:13.56:145,14,0	1/1:22,0:24:43.45:322,43,0	1/1:19,2:20:48.01:280,48,0	1/1:25,0:24:49.25:316,49,0	1/1:12,0:12:20.77:153,21,0	1/1:21,0:21:29.60:157,30,0	1/1:17,1:18:38.99:234,39,0	0/0:22,1:23:4.48:0,4,154	0/1:26,0:26:22.83:23,0,296	0/0:23,0:23:28.63:0,29,281	0/1:12,0:12:1.79:2,0,139
chr10	20347648	.	A	ATTT	4739.59	PASS	AB=0.830;AC=45;AF=0.804;AN=56;BaseQRankSum=5.455;DP=461;FS=6.086;HRun=11;HaplotypeScore=106.5315;InbreedingCoeff=0.2105;MQ=63.99;MQ0=1;MQRankSum=-4.334;QD=10.97;ReadPosRankSum=3.425;VQSLOD=2.0222;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:9,0:33:26.64:58,27,0	0/1:3,0:7:0.99:1,0,55	0/0:9,0:8:9.90:0,10,100	0/1:10,0:9:4.30:4,0,30	0/1:8,0:23:26.31:26,0,78	1/1:14,0:14:11.49:273,11,0	1/1:23,0:24:41.75:362,42,0	1/1:9,18:28:57.02:892,57,0	0/0:20,0:20:56.80:0,57,628	0/1:23,0:23:11.19:214,0,11	1/1:18,0:18:7.46:226,7,0	1/1:15,0:15:1.28:157,1,0	1/1:10,0:10:15.01:138,15,0	1/1:14,0:14:18.03:174,18,0	1/1:3,10:13:9.03:169,9,0	1/1:19,0:19:36.02:336,36,0	1/1:17,0:17:20:335,20,0	1/1:13,0:13:20.97:172,21,0	1/1:25,0:26:2.91:244,3,0	1/1:10,0:10:23.97:218,24,0	1/1:12,0:12:17.94:186,18,0	1/1:7,0:7:3.03:124,3,0	0/1:15,0:15:5.23:118,0,5	0/1:12,0:12:17.40:145,0,17	1/1:1,0:16:18.44:73,18,0	1/1:9,0:25:7.08:30,7,0	0/1:6,0:26:9.49:41,0,9	1/1:2,0:2:2.99:23,3,0
chr10	20347657	.	T	TTTGTTG	14229.82	PASS	AB=0.781;AC=32;AF=0.571;AN=56;BaseQRankSum=-10.079;DP=473;FS=0.408;HRun=0;HaplotypeScore=94.5171;InbreedingCoeff=0.8249;MQ=58.86;MQ0=1;MQRankSum=-10.166;QD=50.46;ReadPosRankSum=0.094;VQSLOD=4.4543;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:75.18:0,75,829	0/0:7,0:7:21.05:0,21,250	0/0:7,0:6:12:0,12,208	0/1:9,0:7:14.89:15,0,102	0/0:21,0:21:58.58:0,59,704	1/1:1,13:14:33.11:1094,33,0	1/1:7,18:28:42.09:1305,42,0	0/0:26,0:26:6.82:0,7,143	0/0:20,0:20:57.20:0,57,1174	1/1:3,17:21:45.14:1235,45,0	1/1:5,12:19:33.11:948,33,0	1/1:4,9:15:21.07:635,21,0	1/1:3,7:11:15.05:497,15,0	1/1:3,17:21:18.06:595,18,0	0/0:16,0:16:10.25:0,10,214	1/1:2,16:20:36.12:1189,36,0	1/1:2,20:23:45.09:1348,45,0	0/1:4,12:18:11.98:673,0,12	1/1:7,15:24:55.70:1469,56,0	1/1:0,10:11:30.03:851,30,0	1/1:1,8:12:21.07:676,21,0	1/1:1,5:8:17.97:472,18,0	1/1:3,10:14:17.65:500,18,0	1/1:4,9:14:24.08:730,24,0	0/0:17,0:17:36:0,36,356	0/0:18,1:19:44.76:0,45,489	0/0:25,0:25:60.16:0,60,720	0/0:4,0:4:12.03:0,12,161
chr10	20347826	.	GAAGAAAGA	G	5099.67	PASS	AC=32;AF=0.615;AN=52;BaseQRankSum=8.297;DP=451;FS=3.340;HRun=0;HaplotypeScore=107.0765;InbreedingCoeff=0.8395;MQ=55.43;MQ0=5;MQRankSum=-4.644;QD=21.43;ReadPosRankSum=0.977;VQSLOD=4.1002;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:54.18:0,54,1942	0/0:8,0:8:24.08:0,24,902	./.	./.	0/0:23,0:23:48.15:0,48,1739	1/1:8,7:15:9.03:208,9,0	1/1:10,0:10:12.03:164,12,0	0/0:34,0:30:24.45:0,24,330	0/0:19,0:19:42.14:0,42,1453	1/1:7,14:20:39.10:708,39,0	1/1:10,10:20:33:673,33,0	1/1:3,4:7:3.01:74,3,0	1/1:1,7:8:5.62:150,6,0	1/1:2,6:8:12.04:283,12,0	0/0:7,0:12:18.06:0,18,545	1/1:7,11:18:21.07:526,21,0	1/1:11,9:20:2.95:75,3,0	1/1:12,8:20:3.01:74,3,0	1/1:8,2:8:6.02:116,6,0	1/1:10,12:22:33.07:735,33,0	1/1:14,0:14:8.97:110,9,0	1/1:5,9:14:24.03:527,24,0	1/1:9,9:18:20.94:526,21,0	1/1:5,8:13:6.02:150,6,0	0/0:25,0:25:36.08:0,36,1159	0/0:5,0:11:15.05:0,15,471	0/0:23,0:23:54.19:0,54,1966	0/0:12,0:12:30.07:0,30,1057
chr10	20347939	.	G	GTAGATAGA	7813.65	PASS	AB=1.000;AC=49;AF=0.980;AN=50;BaseQRankSum=-1.537;DP=617;FS=0.000;HRun=0;HaplotypeScore=212.9901;InbreedingCoeff=0.1880;MQ=70.57;MQ0=1;MQRankSum=0.894;QD=14.28;ReadPosRankSum=1.704;VQSLOD=3.9348;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:25:21.07:367,21,0	1/1:12,0:12:12.03:451,12,0	./.	./.	1/1:17,0:23:23.39:264,23,0	1/1:19,0:19:9.03:169,9,0	1/1:31,0:31:21.07:390,21,0	1/1:40,0:38:12.04:205,12,0	1/1:18,0:23:6.02:180,6,0	1/1:27,0:26:39.13:899,39,0	0/1:14,0:14:0:0,0,0	1/1:19,0:19:15.05:265,15,0	./.	1/1:24,0:23:21.07:495,21,0	1/1:16,11:29:6:146,6,0	1/1:20,0:20:15.05:318,15,0	1/1:26,0:26:8.66:102,9,0	1/1:14,0:14:12.03:232,12,0	1/1:11,0:10:6.02:127,6,0	1/1:30,0:28:15.04:286,15,0	1/1:18,0:18:6.02:158,6,0	1/1:22,0:22:15.04:195,15,0	1/1:23,0:22:3.01:75,3,0	1/1:13,0:13:15.05:323,15,0	1/1:12,2:14:12.01:315,12,0	1/1:28,0:28:42.14:1293,42,0	1/1:25,2:27:18.06:325,18,0	1/1:15,0:15:14.96:233,15,0
chr10	20347985	.	A	AG	4019.03	PASS	AB=0.800;AC=23;AF=0.411;AN=56;BaseQRankSum=8.465;DP=601;FS=31.354;HRun=0;HaplotypeScore=137.9434;InbreedingCoeff=-0.0929;MQ=53.89;MQ0=0;MQRankSum=-2.333;QD=9.05;ReadPosRankSum=-3.779;VQSLOD=1.4792;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:32,6:38:7.36:534,7,0	1/1:13,4:17:25.65:481,26,0	0/0:13,0:10:30.10:0,30,419	0/0:9,0:8:23.99:0,24,289	1/1:19,4:23:25.68:428,26,0	0/1:15,6:21:99:105,0,344	0/1:14,11:25:99:274,0,449	0/1:41,5:44:99:159,0,1459	0/0:22,0:22:42.54:0,43,586	0/1:20,8:27:99:302,0,715	0/0:16,3:19:38.89:0,39,457	0/1:16,7:23:99:137,0,489	0/0:14,4:18:36.08:0,36,481	0/1:18,9:26:99:102,0,398	0/0:25,0:25:44.17:0,44,585	0/1:18,4:22:57.11:57,0,315	0/1:10,10:20:99:151,0,238	0/1:11,4:15:56.64:57,0,401	0/0:14,0:13:36.09:0,36,482	0/1:20,6:25:92.77:93,0,448	0/0:22,2:24:7.36:0,7,602	0/1:17,4:21:98.82:99,0,404	0/0:11,2:12:21.01:0,21,272	0/1:15,4:19:99:104,0,337	0/1:11,1:12:1.07:160,0,1	0/1:19,6:25:99:367,0,115	1/1:26,1:27:13.07:283,13,0	0/1:7,2:9:13.55:127,0,14
chr10	20347987	.	T	TAGAC	4557.14	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=1.221;DP=621;FS=1.019;HRun=0;HaplotypeScore=170.1166;InbreedingCoeff=0.9662;MQ=53.86;MQ0=0;MQRankSum=-1.359;QD=28.31;ReadPosRankSum=-0.309;VQSLOD=4.5582;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:16,23:40:27.09:635,27,0	1/1:2,12:17:42.14:967,42,0	0/0:13,0:10:27.08:0,27,422	0/0:9,0:8:20.79:0,21,278	1/1:13,12:27:42.01:891,42,0	0/0:21,0:21:38.67:0,39,543	0/0:24,0:24:45.11:0,45,698	0/0:47,0:45:90.29:0,90,1471	0/0:21,0:21:55.53:0,56,800	0/0:28,0:27:41.05:0,41,942	0/0:20,0:20:39.13:0,39,603	0/0:23,0:23:41.88:0,42,683	0/0:18,0:18:42.01:0,42,627	0/0:29,0:28:56.70:0,57,698	0/0:26,0:26:53.92:0,54,824	0/0:24,0:24:53.67:0,54,655	0/0:21,0:21:32.75:0,33,423	0/0:16,0:16:30.10:0,30,494	0/0:15,0:14:30.08:0,30,457	0/0:27,0:26:50.55:0,51,695	0/0:24,0:24:53.66:0,54,845	0/0:21,0:21:44.32:0,44,619	0/0:14,0:13:29.70:0,30,396	0/0:19,0:19:33.06:0,33,509	1/1:2,8:11:9.03:222,9,0	1/1:12,13:29:9.97:1222,10,0	1/1:5,21:27:8.89:210,9,0	1/1:3,7:10:18.06:410,18,0
chr10	20348682	.	AG	A	651.47	PASS	AB=0.974;AC=9;AF=0.161;AN=56;BaseQRankSum=4.053;DP=419;FS=5.641;HRun=10;HaplotypeScore=55.9049;InbreedingCoeff=0.4982;MQ=78.03;MQ0=3;MQRankSum=-0.765;QD=7.76;ReadPosRankSum=2.976;VQSLOD=1.4138;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:48.07:0,48,496	0/0:6,0:6:8.61:0,9,77	0/0:37,1:20:1.15:0,1,180	0/0:46,0:19:14.75:0,15,139	0/1:9,0:9:10.43:10,0,70	0/0:6,0:6:3.01:0,3,33	0/0:18,0:18:45.07:0,45,465	1/1:3,8:11:23.99:208,24,0	1/1:6,12:18:26.99:234,27,0	0/1:11,1:12:1.99:2,0,208	0/0:4,0:4:2.97:0,3,20	0/0:15,0:15:24:0,24,237	0/0:15,1:16:13.55:0,14,258	0/0:11,0:11:18.05:0,18,199	1/1:10,15:25:38.95:335,39,0	0/0:9,0:9:21.92:0,22,215	0/0:25,0:25:34.76:0,35,343	0/0:8,0:8:15.04:0,15,164	0/0:3,0:3:5.99:0,6,55	0/0:7,0:7:12.03:0,12,133	0/0:16,0:16:27.07:0,27,299	0/0:8,0:8:21.03:0,21,216	0/0:11,0:11:15.01:0,15,149	0/0:26,0:26:53.94:0,54,511	0/0:17,0:17:27.06:0,27,290	0/0:14,0:14:24.06:0,24,259	0/1:9,0:9:10.95:11,0,110	0/0:5,0:5:11.98:0,12,104
chr10	20348841	.	AGAG	A	390.93	PASS	AB=0.951;AC=28;AF=0.500;AN=56;BaseQRankSum=-0.735;DP=267;FS=6.245;HRun=0;HaplotypeScore=190.5682;InbreedingCoeff=0.2093;MQ=76.49;MQ0=0;MQRankSum=0.577;QD=2.06;ReadPosRankSum=2.717;VQSLOD=1.6062;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:12,0:12:0.21:3,0,0	0/0:3,0:3:2.03:0,2,5	0/1:10,4:15:18.46:253,0,18	0/1:12,4:15:46.62:179,0,47	0/0:16,0:16:3.09:0,3,25	0/1:11,0:11:0.50:0,0,1	0/1:10,0:10:0.52:1,0,1	0/1:14,0:14:0.63:1,0,56	0/1:4,0:4:0.24:1,0,0	0/1:13,0:14:4.65:11,0,5	0/0:7,0:7:1.89:0,2,5	0/1:13,0:13:0.81:1,0,1	0/0:9,0:9:0.25:0,0,3	1/1:5,0:4:0.09:0,0,0	1/1:18,0:19:1.60:13,2,0	0/0:5,0:5:2.84:0,3,25	1/1:5,0:5:1.49:4,1,0	1/1:1,0:1:1.25:3,1,0	1/1:5,0:4:2.24:4,2,0	0/0:12,0:12:0.02:0,0,3	1/1:5,0:5:1.83:3,2,0	0/0:12,0:12:8:0,8,43	0/0:8,0:8:4.41:0,4,29	0/0:5,0:5:0.32:0,0,1	1/1:6,0:6:0.66:1,1,0	1/1:11,0:11:5.80:10,6,0	0/1:10,0:10:0.01:0,0,0	1/1:12,0:12:5.61:12,6,0
chr10	20348845	.	GT	G	4522.69	PASS	AB=0.905;AC=55;AF=0.982;AN=56;BaseQRankSum=1.389;DP=257;FS=2.346;HRun=1;HaplotypeScore=166.6638;InbreedingCoeff=-0.0136;MQ=72.06;MQ0=0;MQRankSum=0.795;QD=17.60;ReadPosRankSum=3.573;VQSLOD=5.3532;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:11:32.72:226,33,0	1/1:3,0:3:8.90:60,9,0	1/1:11,3:14:14.16:215,14,0	0/1:17,2:15:1.26:167,0,1	1/1:15,0:15:41.63:289,42,0	1/1:11,0:11:29.75:205,30,0	1/1:10,0:10:29.74:204,30,0	1/1:11,0:11:29.39:176,29,0	1/1:4,0:4:11.89:82,12,0	1/1:14,0:14:29.58:217,30,0	1/1:7,0:7:20.82:145,21,0	1/1:13,0:13:38.69:267,39,0	1/1:9,0:9:26.75:183,27,0	1/1:5,0:4:5.94:40,6,0	1/1:19,0:19:53.59:380,54,0	1/1:4,0:4:11.89:81,12,0	1/1:5,0:5:14.83:98,15,0	1/1:1,0:1:2.90:16,3,0	1/1:4,0:3:8.79:51,9,0	1/1:12,0:12:32.68:221,33,0	1/1:4,0:4:8.92:61,9,0	1/1:11,0:11:26.15:181,26,0	1/1:7,0:7:17.85:124,18,0	1/1:5,0:5:11.91:86,12,0	1/1:6,0:6:14.90:106,15,0	1/1:11,0:11:32.39:197,32,0	1/1:10,0:10:29.77:214,30,0	1/1:12,0:12:35.52:229,36,0
chr10	20348847	.	G	GA	83.82	PASS	AB=0.802;AC=2;AF=0.036;AN=56;BaseQRankSum=-5.727;DP=254;FS=10.277;HRun=0;HaplotypeScore=181.7123;InbreedingCoeff=0.2114;MQ=70.18;MQ0=0;MQRankSum=4.829;QD=2.47;ReadPosRankSum=-4.875;VQSLOD=0.9774;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:32.36:0,32,200	0/0:3,0:3:8.85:0,9,56	0/1:9,4:13:7.89:103,0,8	0/1:17,4:16:2.93:69,0,3	0/0:15,0:15:39.45:0,39,238	0/0:10,0:10:29.43:0,29,182	0/0:10,0:10:29.43:0,29,182	0/0:11,0:11:29.76:0,30,207	0/0:4,0:4:11.76:0,12,73	0/0:14,0:14:38.60:0,39,267	0/0:7,0:7:20.56:0,21,125	0/0:13,0:13:38.25:0,38,236	0/0:9,0:9:26.50:0,27,166	0/0:4,0:3:5.90:0,6,37	0/0:18,0:18:51.65:0,52,325	0/0:4,0:4:11.78:0,12,73	0/0:5,0:5:14.77:0,15,95	0/0:1,0:1:2.98:0,3,22	0/0:4,0:3:8.79:0,9,55	0/0:11,0:11:32.45:0,32,205	0/0:4,0:4:8.84:0,9,55	0/0:11,0:11:26.52:0,27,166	0/0:7,0:7:17.63:0,18,108	0/0:5,0:5:11.69:0,12,69	0/0:6,0:6:14.64:0,15,87	0/0:11,0:11:32.72:0,33,224	0/0:10,0:10:28.98:0,29,173	0/0:12,0:12:35.55:0,36,234
chr10	20348848	.	G	GA	307.46	PASS	AB=0.767;AC=3;AF=0.054;AN=56;BaseQRankSum=-6.289;DP=260;FS=0.991;HRun=0;HaplotypeScore=182.2913;InbreedingCoeff=0.5253;MQ=71.35;MQ0=0;MQRankSum=6.425;QD=8.31;ReadPosRankSum=-6.152;VQSLOD=2.0174;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:32.48:0,32,205	0/0:3,0:3:8.88:0,9,58	1/1:9,4:14:20.27:245,20,0	0/1:16,5:17:4.81:166,0,5	0/0:16,0:16:41.14:0,41,253	0/0:10,0:10:29.57:0,30,187	0/0:10,0:10:29.56:0,30,187	0/0:12,0:12:29.77:0,30,213	0/0:4,0:4:11.81:0,12,75	0/0:14,0:14:38.67:0,39,275	0/0:7,0:7:20.65:0,21,129	0/0:13,0:13:38.43:0,38,242	0/0:9,0:9:26.62:0,27,170	0/0:4,0:3:5.92:0,6,38	0/0:18,0:18:52.11:0,52,326	0/0:4,0:4:11.83:0,12,76	0/0:5,0:5:14.81:0,15,98	0/0:1,0:1:2.99:0,3,23	0/0:5,0:4:8.79:0,9,56	0/0:11,0:11:32.58:0,33,211	0/0:4,0:4:8.87:0,9,57	0/0:11,0:11:26.64:0,27,170	0/0:7,0:7:17.72:0,18,111	0/0:5,0:5:11.75:0,12,71	0/0:6,0:6:14.70:0,15,90	0/0:11,0:11:32.72:0,33,231	0/0:10,0:10:29.09:0,29,178	0/0:12,0:12:35.61:0,36,240
chr10	20348904	.	A	ATT	3126.26	PASS	AB=0.893;AC=19;AF=0.339;AN=56;BaseQRankSum=0.378;DP=489;FS=11.882;HRun=0;HaplotypeScore=142.1263;InbreedingCoeff=-0.0849;MQ=44.91;MQ0=19;MQRankSum=1.843;QD=11.29;ReadPosRankSum=-0.499;VQSLOD=2.8197;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:23:33.10:0,33,486	0/0:8,0:8:24.02:0,24,307	0/0:7,0:2:5.72:0,6,33	0/0:24,0:8:12.15:0,12,134	0/0:13,0:13:21.05:0,21,279	0/1:19,3:21:43.63:314,0,44	0/1:21,3:24:99:481,0,104	0/0:26,0:25:59.60:0,60,767	0/0:18,0:16:23.21:0,23,291	0/1:13,0:13:74.89:75,0,249	0/1:10,2:11:31.08:174,0,31	0/1:20,1:20:12.18:249,0,12	0/1:20,4:23:99:405,0,233	0/1:14,2:13:20.94:141,0,21	0/0:26,0:26:30.07:0,30,409	0/1:15,4:18:43.79:277,0,44	0/1:9,2:11:53.35:140,0,53	0/1:6,0:4:25.94:26,0,55	0/1:22,2:21:99:277,0,320	1/1:26,1:27:11.99:317,12,0	1/1:13,0:9:9.03:153,9,0	0/1:20,1:21:18.70:116,0,19	1/1:16,0:16:5.59:97,6,0	0/1:5,3:7:27.22:56,0,27	0/0:12,0:12:15.04:0,15,209	0/0:25,0:25:71.60:0,72,995	0/0:11,0:10:24.07:0,24,320	0/0:17,0:15:39.08:0,39,493
chr10	20349941	.	AG	A	1331.30	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-0.123;DP=798;FS=0.000;HRun=1;HaplotypeScore=154.7362;InbreedingCoeff=0.9992;MQ=67.39;MQ0=2;MQRankSum=-0.913;QD=38.04;ReadPosRankSum=0.445;VQSLOD=3.1647;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,157,2484	0/0:15,0:15:45.14:0,45,696	0/0:24,0:24:33.21:0,33,835	0/0:20,0:19:48.40:0,48,682	0/0:21,0:21:63.21:0,63,1005	0/0:26,0:26:78.25:0,78,1223	0/0:35,0:35:99:0,105,1655	0/0:34,0:34:99:0,102,1569	1/1:0,35:35:99:1426,102,0	0/0:30,0:30:90.31:0,90,1438	0/0:20,0:20:56.87:0,57,909	0/0:37,0:37:99:0,111,1761	0/0:23,0:23:66.22:0,66,1048	0/0:19,0:19:57.19:0,57,907	0/0:39,0:39:99:0,114,1799	0/0:21,0:21:63.21:0,63,1000	0/0:52,0:52:99:0,156,2425	0/0:25,0:25:75.20:0,75,1132	0/0:21,0:19:51.17:0,51,815	0/0:25,0:25:75.26:0,75,1187	0/0:55,0:54:99:0,157,2493	0/0:19,0:19:54.18:0,54,859	0/0:29,0:29:87.28:0,87,1356	0/0:40,0:40:99:0,120,1894	0/0:17,0:17:51.17:0,51,810	0/0:23,0:23:66.23:0,66,1053	0/0:29,0:29:84.27:0,84,1314	0/0:11,0:10:30.10:0,30,470
chr10	20350062	.	AGT	A	7602.14	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=15.595;DP=777;FS=6.510;HRun=0;HaplotypeScore=99.4785;InbreedingCoeff=0.9999;MQ=60.00;MQ0=2;MQRankSum=3.794;QD=38.59;ReadPosRankSum=3.452;VQSLOD=7.1088;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,51:52:99:1854,126,0	1/1:0,12:12:36.12:529,36,0	0/0:19,0:14:36.05:0,36,604	0/0:18,0:15:42.13:0,42,737	1/1:0,39:39:96.32:1414,96,0	0/0:22,0:22:66.19:0,66,1163	0/0:33,0:33:84.27:0,84,1541	0/0:34,0:34:99:0,99,1846	0/0:28,0:28:81.28:0,81,1516	0/0:27,0:27:81.26:0,81,1426	0/0:23,0:23:69.22:0,69,1261	0/0:33,0:33:96.32:0,96,1742	0/0:25,0:25:72.23:0,72,1301	0/0:35,0:35:99:0,99,1788	0/0:40,0:40:99:0,114,2089	0/0:28,0:28:81.28:0,81,1517	0/0:40,0:40:99:0,117,2109	0/0:19,0:19:51.17:0,51,935	0/0:21,0:21:63.22:0,63,1166	0/0:21,0:21:63.19:0,63,1145	0/0:36,0:36:99:0,108,1982	0/0:21,0:21:57.20:0,57,1067	0/0:26,0:26:75.04:0,75,1278	0/0:30,0:30:87.30:0,87,1612	1/1:0,21:21:57.19:840,57,0	1/1:1,30:31:59.72:1288,60,0	1/1:0,26:26:72.24:1060,72,0	1/1:1,15:16:42.14:618,42,0
chr10	20350943	.	A	AT	11083.80	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-4.715;DP=426;FS=4.928;HRun=9;HaplotypeScore=41.3221;InbreedingCoeff=0.8050;MQ=68.24;MQ0=0;MQRankSum=-2.123;QD=27.30;ReadPosRankSum=1.012;VQSLOD=5.0063;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,21:25:63.17:697,63,0	1/1:3,3:6:9.02:100,9,0	0/0:4,0:4:6:0,6,52	0/0:7,0:7:2.68:0,3,26	1/1:1,18:20:53.98:578,54,0	1/1:1,9:10:27.07:299,27,0	1/1:4,7:11:18.05:199,18,0	1/1:5,12:17:14.29:372,14,0	0/0:9,0:9:6.23:0,6,16	1/1:3,14:17:39.11:431,39,0	1/1:0,22:22:60.16:663,60,0	1/1:2,6:8:18.05:199,18,0	1/1:2,11:13:30.08:332,30,0	1/1:1,8:9:24.06:266,24,0	1/1:3,12:15:33.09:365,33,0	1/1:1,14:15:42.11:465,42,0	1/1:3,19:22:54.15:597,54,0	1/1:0,27:27:81.22:896,81,0	1/1:2,13:15:42.08:445,42,0	1/1:3,26:29:78.12:835,78,0	1/1:0,12:12:36.10:398,36,0	1/1:0,6:6:18.05:199,18,0	1/1:4,14:18:39.10:426,39,0	1/1:1,9:10:18.01:199,18,0	1/1:2,23:25:63.17:697,63,0	1/1:2,13:15:39.11:431,39,0	1/1:2,21:23:57.15:629,57,0	1/1:3,12:15:33.09:365,33,0
chr10	20350951	.	TTC	T	125.24	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-2.039;DP=424;FS=1.272;HRun=0;HaplotypeScore=84.9161;InbreedingCoeff=0.7401;MQ=66.28;MQ0=0;MQRankSum=0.965;QD=15.66;ReadPosRankSum=-2.852;VQSLOD=2.6090;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:69:0,69,679	0/0:3,0:3:9.02:0,9,88	0/0:4,0:4:6.02:0,6,93	0/0:6,0:6:4.87:0,5,100	0/0:21,0:21:63.09:0,63,617	0/0:12,0:12:36.04:0,36,340	0/0:8,0:8:21.03:0,21,202	0/0:18,0:18:40.84:0,41,438	1/1:0,8:8:15.05:214,15,0	0/0:16,0:16:44.92:0,45,448	0/0:22,0:22:66.11:0,66,666	0/0:8,0:8:22.84:0,23,202	0/0:12,0:12:33.05:0,33,320	0/0:9,0:9:27.04:0,27,261	0/0:15,0:15:42.05:0,42,398	0/0:14,0:14:42.08:0,42,413	0/0:20,0:19:54.57:0,55,531	0/0:28,0:28:84.06:0,84,808	0/0:18,0:19:24.18:0,24,454	0/0:29,0:29:66.39:0,66,804	0/0:15,0:15:44.86:0,45,397	0/0:6,0:6:18.04:0,18,177	0/0:18,0:18:40.67:0,41,431	0/0:10,0:10:17.99:0,18,176	0/0:25,0:25:69.06:0,69,657	0/0:16,0:15:45.08:0,45,440	0/0:26,0:26:71.79:0,72,653	0/0:12,0:12:33.06:0,33,324
chr10	20351275	.	A	AAGAG	2311.59	PASS	AC=34;AF=0.654;AN=52;BaseQRankSum=-1.274;DP=355;FS=3.267;HRun=0;HaplotypeScore=82.5629;InbreedingCoeff=0.6542;MQ=71.04;MQ0=7;MQRankSum=0.483;QD=11.62;ReadPosRankSum=-1.222;VQSLOD=2.7782;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:13:12.02:0,12,147	./.	./.	0/0:25,0:10:2.84:0,3,14	0/0:12,0:12:9.02:0,9,120	1/1:15,0:15:12.04:230,12,0	1/1:10,4:15:8.13:161,8,0	0/0:17,0:18:2.99:0,3,27	1/1:7,0:6:0.89:2,1,0	1/1:8,0:8:12.04:181,12,0	1/1:6,0:6:3.01:67,3,0	1/1:9,0:9:6.02:137,6,0	1/1:18,0:17:21.07:395,21,0	1/1:14,0:14:18.06:336,18,0	0/0:5,0:11:15.02:0,15,140	1/1:8,1:13:11.66:203,12,0	1/1:12,0:16:5.59:26,6,0	1/1:10,8:20:18.06:385,18,0	1/1:8,0:7:3.01:56,3,0	1/1:8,0:8:3.01:64,3,0	1/1:8,6:13:3.01:71,3,0	1/1:2,0:6:3.01:42,3,0	1/1:7,0:12:5.63:65,6,0	1/1:10,0:10:5.94:66,6,0	0/0:12,0:13:15.03:0,15,192	0/0:12,0:15:6.48:0,6,75	0/0:18,0:21:33.08:0,33,454	0/0:8,0:8:15.03:0,15,211
chr10	20353740	.	C	CTCTG	14948.15	PASS	AB=0.781;AC=32;AF=0.571;AN=56;BaseQRankSum=-14.685;DP=649;FS=3.148;HRun=0;HaplotypeScore=100.4781;InbreedingCoeff=0.8775;MQ=79.74;MQ0=4;MQRankSum=-2.175;QD=38.53;ReadPosRankSum=2.358;VQSLOD=4.8529;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:81.26:0,81,1296	0/0:12,0:12:21.07:0,21,344	0/0:35,0:33:52.75:0,53,757	0/0:35,0:35:53.45:0,53,832	0/0:22,0:22:57.16:0,57,883	1/1:8,13:22:30.10:731,30,0	1/1:6,19:25:51.18:1231,51,0	0/0:16,0:16:30.10:0,30,469	0/0:15,0:15:39.13:0,39,639	1/1:16,14:29:51.17:1218,51,0	1/1:7,11:19:21.07:512,21,0	1/1:2,18:19:45.15:1097,45,0	1/1:3,15:20:48.16:1150,48,0	1/1:5,11:16:27.09:623,27,0	0/0:31,0:31:63.22:0,63,1032	1/1:5,11:16:33.11:805,33,0	1/1:3,26:30:60.21:1463,60,0	1/1:8,11:20:33.11:758,33,0	1/1:12,7:20:28.39:570,28,0	1/1:6,14:21:39.13:949,39,0	1/1:7,18:25:39.13:951,39,0	0/1:7,14:21:6.88:909,0,7	1/1:6,15:23:35.55:877,36,0	1/1:9,18:28:45.15:1098,45,0	0/0:23,0:23:60.20:0,60,959	0/1:29,1:30:6.81:7,0,953	0/0:19,0:19:36.08:0,36,554	0/0:21,0:21:33.11:0,33,516
chr10	20354642	.	TA	T	1985.75	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=17.335;DP=768;FS=0.313;HRun=2;HaplotypeScore=150.8235;InbreedingCoeff=0.9090;MQ=85.36;MQ0=0;MQRankSum=-11.961;QD=8.34;ReadPosRankSum=-1.007;VQSLOD=0.6355;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:35,12:46:40.07:226,40,0	1/1:13,2:15:10.06:137,10,0	0/0:28,0:28:81.21:0,81,1133	0/0:32,0:32:84.23:0,84,1184	0/1:25,0:30:16.35:59,0,16	0/0:29,0:29:87.23:0,87,1247	0/0:34,0:34:99:0,102,1488	1/1:14,5:21:54.96:406,55,0	0/0:28,0:28:81.27:0,81,1212	0/0:29,0:29:84.28:0,84,1259	0/0:25,0:25:75.25:0,75,1124	0/0:38,0:38:99:0,114,1706	0/0:29,0:29:84.28:0,84,1258	0/0:19,0:19:54.18:0,54,810	1/1:26,5:33:52.36:432,52,0	0/0:25,0:25:69.23:0,69,1034	0/0:37,0:36:99:0,108,1595	0/0:19,0:19:48.16:0,48,719	0/0:18,0:18:48.15:0,48,699	0/0:33,0:33:93.32:0,93,1393	0/0:38,0:38:99:0,108,1616	0/0:18,0:18:54.18:0,54,808	0/0:24,0:24:69.23:0,69,1033	0/0:27,0:27:75.24:0,75,1105	1/1:17,3:24:43.15:218,43,0	1/1:26,1:28:25.93:315,26,0	1/1:24,3:26:47.33:225,47,0	1/1:13,0:13:23.12:177,23,0
chr10	20354643	.	A	ACTC	9297.92	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=18.013;DP=764;FS=0.309;HRun=0;HaplotypeScore=156.7513;InbreedingCoeff=0.9998;MQ=85.18;MQ0=0;MQRankSum=-12.121;QD=38.74;ReadPosRankSum=-1.704;VQSLOD=5.2177;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:15,33:47:81.25:1403,81,0	1/1:2,13:15:36.12:584,36,0	0/0:28,0:28:81.21:0,81,1295	0/0:32,0:32:84.08:0,84,1384	1/1:3,25:28:44.81:780,45,0	0/0:29,0:29:87.16:0,87,1450	0/0:34,0:34:99:0,102,1763	1/1:9,12:21:56.36:951,56,0	0/0:30,0:30:81.28:0,81,1486	0/0:29,0:29:84.29:0,84,1542	0/0:26,0:26:75.26:0,75,1387	0/0:38,0:38:99:0,114,2059	0/0:28,0:28:84.29:0,84,1532	0/0:18,0:18:54.19:0,54,1002	1/1:11,24:35:66.38:1520,66,0	0/0:24,0:24:69.24:0,69,1275	0/0:36,0:35:99:0,108,1874	0/0:19,0:19:48.16:0,48,861	0/0:16,0:16:48.15:0,48,824	0/0:32,0:32:93.32:0,93,1654	0/0:37,0:37:99:0,108,1966	0/0:18,0:18:54.17:0,54,945	0/0:24,0:24:69.24:0,69,1272	0/0:26,0:26:75.25:0,75,1357	1/1:7,17:24:60.20:1049,60,0	1/1:7,22:29:28.33:1334,28,0	1/1:7,20:26:69.23:1166,69,0	1/1:5,8:13:33:510,33,0
chr10	20354644	.	A	AAT	3937.16	PASS	AB=0.684;AC=17;AF=0.304;AN=56;BaseQRankSum=18.919;DP=775;FS=0.000;HRun=0;HaplotypeScore=168.1303;InbreedingCoeff=0.9098;MQ=83.08;MQ0=0;MQRankSum=-14.162;QD=15.14;ReadPosRankSum=-1.097;VQSLOD=3.3217;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:52:89.80:723,90,0	1/1:2,0:15:21.91:251,22,0	0/0:28,0:28:74.37:0,74,1196	0/0:29,0:29:84.26:0,84,1282	1/1:5,0:30:44.89:365,45,0	0/0:28,0:28:79.78:0,80,1221	0/0:32,0:32:96.28:0,96,1489	0/1:14,0:26:4.85:372,0,5	0/0:30,0:30:87.25:0,87,1345	0/0:28,0:28:84.28:0,84,1347	0/0:26,0:26:78.25:0,78,1247	0/0:38,0:38:99:0,114,1808	0/0:28,0:28:84.27:0,84,1343	0/0:18,0:18:54.18:0,54,880	1/1:12,0:36:32.30:599,32,0	0/0:24,0:24:72.23:0,72,1147	0/0:35,0:34:99:0,105,1671	0/0:19,0:19:54.13:0,54,802	0/0:16,0:16:48.14:0,48,736	0/0:32,0:32:93.17:0,93,1446	0/0:37,0:37:99:0,108,1712	0/0:18,0:18:54.18:0,54,878	0/0:24,0:24:69.24:0,69,1124	0/0:25,0:25:72.25:0,72,1174	1/1:9,0:26:42.78:429,43,0	1/1:9,0:31:9.33:514,9,0	1/1:5,1:29:56.19:518,56,0	1/1:5,0:13:5.99:166,6,0
chr10	20355081	.	AC	A	660.58	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.381;DP=596;FS=12.179;HRun=1;HaplotypeScore=87.8611;InbreedingCoeff=0.9824;MQ=80.89;MQ0=0;MQRankSum=-4.230;QD=34.77;ReadPosRankSum=1.154;VQSLOD=2.5930;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,120,1808	0/0:8,0:8:24.08:0,24,383	0/0:13,0:13:39.12:0,39,597	0/0:18,0:18:51.13:0,51,767	0/0:27,0:27:81.26:0,81,1250	0/0:20,0:20:60.14:0,60,867	0/0:17,0:17:51.17:0,51,800	0/0:29,0:29:87.30:0,87,1373	1/1:5,14:19:57.16:755,57,0	0/0:29,0:29:87.29:0,87,1368	0/0:15,0:15:45.14:0,45,690	0/0:25,0:25:72.23:0,72,1120	0/0:22,0:22:66.22:0,66,1036	0/0:25,0:25:72.24:0,72,1127	0/0:18,0:18:54.18:0,54,863	0/0:22,0:22:63.21:0,63,1001	0/0:31,0:31:93.29:0,93,1459	0/0:22,0:22:57.19:0,57,895	0/0:14,0:14:42.13:0,42,633	0/0:18,0:18:54.18:0,54,844	0/0:33,0:33:93.30:0,93,1455	0/0:16,0:16:48.15:0,48,742	0/0:14,0:14:42.14:0,42,665	0/0:33,0:33:96.33:0,96,1533	0/0:18,0:18:54.16:0,54,793	0/0:23,0:23:69.24:0,69,1102	0/0:15,0:15:45.15:0,45,718	0/0:5,0:5:15.05:0,15,239
chr10	20355103	.	TA	T	11092.04	PASS	AB=1.000;AC=53;AF=0.946;AN=56;BaseQRankSum=-4.037;DP=580;FS=6.883;HRun=10;HaplotypeScore=62.5545;InbreedingCoeff=0.6535;MQ=76.18;MQ0=1;MQRankSum=-6.110;QD=19.56;ReadPosRankSum=4.300;VQSLOD=5.7291;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,37:42:83.95:729,84,0	1/1:0,7:7:21:182,21,0	0/1:13,0:12:0.19:0,0,182	0/0:13,0:13:2.44:0,2,169	1/1:5,18:23:44.97:391,45,0	1/1:3,21:24:50.99:442,51,0	1/1:3,13:17:38.02:318,38,0	1/1:5,25:30:74.94:644,75,0	1/1:4,11:15:35.97:308,36,0	1/1:4,24:28:71.34:594,71,0	1/1:0,15:16:44.02:370,44,0	1/1:5,18:23:40.04:429,40,0	1/1:4,17:21:50.99:443,51,0	1/1:3,17:20:50.99:443,51,0	1/1:2,24:26:65.98:573,66,0	1/1:6,17:23:41.98:365,42,0	1/1:2,28:30:77.98:677,78,0	1/1:3,27:30:56.98:495,57,0	1/1:2,9:11:26.96:228,27,0	1/1:3,11:14:29.66:245,30,0	1/1:3,23:26:59.96:521,60,0	1/1:2,11:13:26.93:227,27,0	1/1:0,22:22:50.88:442,51,0	1/1:3,32:35:83.98:729,84,0	1/1:0,16:16:44.99:391,45,0	1/1:4,18:22:50.96:439,51,0	1/1:1,17:18:47.99:417,48,0	1/1:0,2:2:6:52,6,0
chr10	20355702	.	G	GC	1819.68	PASS	AB=0.839;AC=27;AF=0.675;AN=40;BaseQRankSum=-0.162;DP=168;FS=6.096;HRun=1;HaplotypeScore=78.0352;InbreedingCoeff=0.1737;MQ=32.56;MQ0=14;MQRankSum=0.823;QD=12.91;ReadPosRankSum=4.946;VQSLOD=2.6257;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,3:11:11.99:233,12,0	./.	0/0:7,0:2:5.99:0,6,60	./.	./.	0/0:1,0:1:2.37:0,2,8	0/1:12,4:13:13.55:86,0,14	0/1:19,0:11:21.03:105,0,21	1/1:3,1:4:8.23:74,8,0	./.	./.	1/1:6,1:7:8.43:79,8,0	1/1:2,3:5:9.02:103,9,0	1/1:1,3:4:6.01:60,6,0	1/1:3,4:6:15.03:158,15,0	1/1:5,1:5:9.02:98,9,0	0/1:12,2:14:9.67:255,0,10	1/1:5,2:7:6.02:75,6,0	0/1:7,3:7:13.67:85,0,14	./.	./.	0/0:2,0:2:5.44:0,5,27	0/0:1,0:1:2.50:0,2,9	0/1:6,3:8:25.48:32,0,25	1/1:4,0:4:11.22:92,11,0	1/1:5,0:4:5.93:54,6,0	1/1:4,9:13:34.89:365,35,0	./.
chr10	20355704	.	T	TAGCAAGCGCA	6309.04	PASS	AB=0.727;AC=41;AF=0.932;AN=44;BaseQRankSum=-0.335;DP=159;FS=0.000;HRun=0;HaplotypeScore=67.8040;InbreedingCoeff=0.1768;MQ=35.05;MQ0=15;MQRankSum=-0.029;QD=44.74;ReadPosRankSum=0.699;VQSLOD=3.9857;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,1:11:9.02:205,9,0	./.	0/0:7,0:2:6.02:0,6,120	./.	./.	1/1:3,0:3:5.99:92,6,0	1/1:7,4:9:17.99:385,18,0	1/1:16,0:9:17.94:262,18,0	1/1:4,1:4:11.99:321,12,0	1/1:2,0:1:3:29,3,0	1/1:3,1:3:2.98:21,3,0	1/1:6,1:7:1.03:506,1,0	1/1:5,3:8:14.98:361,15,0	1/1:2,3:5:9.02:314,9,0	1/1:3,4:6:18:623,18,0	1/1:3,1:3:8.97:190,9,0	1/1:12,1:13:20.95:429,21,0	1/1:6,1:7:17.95:363,18,0	1/1:7,3:7:6.01:174,6,0	./.	./.	1/1:3,0:3:6.02:120,6,0	1/1:1,0:1:3.01:69,3,0	0/1:5,3:7:6.14:174,0,6	1/1:3,0:3:6.02:268,6,0	1/1:2,0:1:3.01:136,3,0	1/1:2,8:11:27.09:1267,27,0	./.
chr10	20355731	.	G	GAA	5015.95	PASS	AB=0.730;AC=50;AF=0.893;AN=56;BaseQRankSum=-2.440;DP=277;FS=14.398;HRun=11;HaplotypeScore=58.4932;InbreedingCoeff=0.2317;MQ=52.04;MQ0=9;MQRankSum=-1.313;QD=18.79;ReadPosRankSum=-0.146;VQSLOD=1.9510;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,11:17:23.05:278,23,0	1/1:0,2:2:6.02:87,6,0	0/1:4,0:2:0.16:0,0,0	0/0:9,0:7:14.83:0,15,108	0/1:3,4:6:17.28:42,0,17	1/1:2,7:9:20.99:257,21,0	1/1:5,10:14:32.60:443,33,0	1/1:20,7:23:16.26:482,16,0	1/1:2,0:9:19.69:68,20,0	0/1:2,2:6:17.48:85,0,17	1/1:6,3:8:11.95:126,12,0	1/1:1,6:9:23.05:278,23,0	1/1:5,3:9:17.46:180,17,0	0/1:7,3:13:16.93:95,0,17	1/1:5,5:10:5.87:87,6,0	1/1:2,2:3:6.02:87,6,0	1/1:6,11:19:5.99:364,6,0	1/1:3,4:7:15.05:212,15,0	1/1:6,10:15:30.06:390,30,0	1/1:0,3:3:6.02:78,6,0	1/1:1,10:10:15.05:217,15,0	1/1:0,5:5:15.05:217,15,0	1/1:0,4:4:9.03:130,9,0	1/1:3,11:15:21.60:239,22,0	1/1:4,2:8:11.48:115,11,0	1/1:1,6:8:21.02:246,21,0	1/1:8,2:10:14.53:171,15,0	1/1:1,1:1:3.01:43,3,0
chr10	20357118	.	GTA	G	7263.44	PASS	AB=0.958;AC=20;AF=0.357;AN=56;BaseQRankSum=13.662;DP=757;FS=1.797;HRun=0;HaplotypeScore=102.4652;InbreedingCoeff=0.8674;MQ=68.10;MQ0=10;MQRankSum=1.392;QD=22.42;ReadPosRankSum=-1.438;VQSLOD=4.7514;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,22:27:30.07:378,30,0	1/1:1,8:8:17.97:227,18,0	0/1:20,0:12:1.90:2,0,12	0/0:35,0:20:16.55:0,17,161	1/1:4,36:39:90.11:1135,90,0	0/0:28,0:28:69.22:0,69,1115	0/1:10,1:11:13.63:14,0,325	1/1:17,35:52:99:1253,105,0	0/0:4,0:23:54.04:0,54,503	0/0:30,0:31:87.27:0,87,1374	0/0:29,0:29:78.24:0,78,1242	0/0:28,1:30:40.46:0,40,1158	0/0:36,1:37:73.81:0,74,1732	0/0:17,0:18:51.15:0,51,793	1/1:6,34:40:31.40:934,31,0	0/0:24,1:26:9.70:0,10,1002	0/0:21,1:22:19.06:0,19,826	0/0:30,0:31:43.84:0,44,1160	0/0:21,0:21:42.04:0,42,566	0/0:38,2:40:39.15:0,39,1594	0/0:17,0:17:39.13:0,39,648	0/0:14,0:14:33.10:0,33,524	0/0:21,0:21:54.16:0,54,848	0/0:10,0:10:27.09:0,27,449	1/1:3,17:20:48.15:606,48,0	1/1:4,38:41:64.38:1277,64,0	1/1:9,28:36:75.24:946,75,0	1/1:7,17:24:39.12:492,39,0
chr10	20358240	.	GA	G	4146.96	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=10.720;DP=538;FS=2.552;HRun=9;HaplotypeScore=56.2975;InbreedingCoeff=0.9965;MQ=74.04;MQ0=0;MQRankSum=-3.071;QD=22.18;ReadPosRankSum=2.530;VQSLOD=4.5469;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,26:27:57.99:593,58,0	1/1:1,11:12:29.96:275,30,0	0/0:11,0:11:18.88:0,19,176	0/0:10,0:9:20.84:0,21,209	1/1:3,8:11:17.99:164,18,0	0/0:20,0:20:54.15:0,54,614	0/0:16,0:16:48.14:0,48,554	1/1:5,26:31:78.04:714,78,0	0/0:22,0:22:60.16:0,60,675	0/0:21,1:22:29.70:0,30,596	0/0:21,0:21:57.06:0,57,610	0/0:20,0:20:54.15:0,54,614	0/0:22,0:22:57.16:0,57,646	0/0:23,0:23:63.18:0,63,718	1/1:2,20:22:54.03:494,54,0	0/0:23,0:23:66.18:0,66,752	0/0:26,0:26:75.22:0,75,865	0/0:20,0:20:57.17:0,57,658	0/0:22,0:22:63.18:0,63,719	0/0:13,0:13:36.10:0,36,407	0/0:9,0:9:24.07:0,24,277	0/0:12,0:12:36.08:0,36,390	0/0:16,0:17:44.94:0,45,481	0/0:21,0:21:60.18:0,60,692	1/1:0,18:19:53.07:473,53,0	1/1:3,21:25:65.07:583,65,0	1/1:3,20:23:54.02:494,54,0	1/1:0,17:17:39.02:357,39,0
chr10	20358833	.	T	TG	9215.84	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=-14.209;DP=601;FS=0.671;HRun=7;HaplotypeScore=55.8515;InbreedingCoeff=0.9976;MQ=81.11;MQ0=0;MQRankSum=-2.771;QD=28.53;ReadPosRankSum=2.634;VQSLOD=5.4871;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,135,1302	0/0:7,0:7:18.03:0,18,174	0/0:20,0:20:32.96:0,33,295	0/0:19,0:19:38.60:0,39,340	0/0:24,0:24:69.09:0,69,660	1/1:2,17:19:45.14:543,45,0	1/1:2,23:25:57.17:689,57,0	0/0:30,0:30:72.10:0,72,690	0/0:20,0:20:57.09:0,57,550	1/1:1,15:16:45.14:543,45,0	1/1:0,13:13:27.08:325,27,0	1/1:4,31:35:78.24:939,78,0	1/1:4,16:20:18.91:514,19,0	1/1:2,13:15:39.12:468,39,0	0/0:29,0:29:81.12:0,81,782	1/1:1,17:18:45.14:544,45,0	1/1:3,28:31:81.25:979,81,0	1/1:3,12:15:30.09:362,30,0	1/1:1,12:13:39.09:448,39,0	1/1:5,15:20:42.13:507,42,0	1/1:5,24:29:63.19:761,63,0	1/1:3,13:16:36.11:434,36,0	1/1:0,13:13:36.11:435,36,0	1/1:1,24:25:60.18:725,60,0	0/0:18,0:18:51.08:0,51,492	0/0:24,1:25:32.87:0,33,601	0/0:25,0:25:66.10:0,66,637	0/0:13,0:13:36.06:0,36,348
chr10	20359341	.	CCACACACACACA	C	9803.65	PASS	AB=0.859;AC=29;AF=0.518;AN=56;BaseQRankSum=9.870;DP=630;FS=11.128;HRun=0;HaplotypeScore=217.4318;InbreedingCoeff=0.6834;MQ=55.18;MQ0=7;MQRankSum=-10.277;QD=30.35;ReadPosRankSum=1.173;VQSLOD=3.1634;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:34:72.25:0,72,3369	0/0:13,0:16:33.11:0,33,1656	0/0:27,0:9:0:0,0,0	0/0:41,0:21:6:0,6,85	0/0:23,0:24:48.16:0,48,2239	1/1:9,8:18:0.92:785,1,0	1/1:11,4:15:9.03:313,9,0	0/0:35,0:35:54.19:0,54,2266	0/0:25,0:26:59.64:0,60,2633	1/1:17,8:27:13.12:847,13,0	1/1:7,6:14:15.05:500,15,0	1/1:12,15:29:48.16:1625,48,0	1/1:16,7:22:14.74:521,15,0	1/1:4,7:11:18.06:587,18,0	0/0:21,0:34:32.14:0,32,1263	1/1:11,6:18:18.06:605,18,0	0/1:14,6:20:99:200,0,104	1/1:7,7:14:12.04:417,12,0	1/1:9,3:12:9.03:313,9,0	1/1:16,8:24:33.10:1008,33,0	0/1:29,3:32:31.27:502,0,31	1/1:21,14:35:30.10:921,30,0	1/1:7,7:14:21.07:561,21,0	0/1:15,2:17:36.80:98,0,37	0/0:20,0:24:39.13:0,39,2049	0/0:15,0:17:33.10:0,33,1587	0/0:19,0:18:48.16:0,48,2506	0/0:9,0:10:24.08:0,24,1291
chr10	20363327	.	TAA	T	7172.68	PASS	AB=0.818;AC=38;AF=0.679;AN=56;BaseQRankSum=-10.191;DP=571;FS=5.943;HRun=11;HaplotypeScore=84.0275;InbreedingCoeff=0.8854;MQ=69.59;MQ0=6;MQRankSum=1.150;QD=18.34;ReadPosRankSum=0.848;VQSLOD=3.9658;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:6,1:28:12.44:0,12,166	0/0:3,0:14:11.76:0,12,52	0/0:35,0:13:23.64:0,24,206	0/1:23,0:15:3.23:3,0,122	0/0:6,0:26:44.89:0,45,197	1/1:2,18:20:30.07:319,30,0	1/1:4,7:11:18.51:190,19,0	1/1:9,19:29:41.05:565,41,0	0/0:2,0:13:14.93:0,15,40	1/1:3,21:24:63.13:658,63,0	1/1:3,18:20:42.05:443,42,0	1/1:1,14:15:27.06:286,27,0	1/1:1,19:19:45.09:479,45,0	1/1:5,12:17:30.06:317,30,0	1/1:3,18:21:39.08:415,39,0	1/1:4,19:23:38.93:415,39,0	1/1:2,25:27:57.13:605,57,0	1/1:1,9:10:21.05:223,21,0	1/1:4,19:23:57.12:604,57,0	1/1:2,13:15:35.55:348,36,0	1/1:0,14:14:27.07:287,27,0	1/1:2,9:11:27.06:285,27,0	1/1:26,0:26:35.64:329,36,0	1/1:19,1:20:42.03:400,42,0	0/0:0,0:20:34.93:0,35,120	0/1:9,1:21:1.11:1,0,71	0/0:4,0:23:36.29:0,36,144	0/0:5,0:21:32.97:0,33,138
chr10	20363338	.	AC	A	944.55	PASS	AB=0.983;AC=18;AF=0.321;AN=56;BaseQRankSum=-1.126;DP=581;FS=0.948;HRun=1;HaplotypeScore=98.6411;InbreedingCoeff=0.0645;MQ=70.51;MQ0=9;MQRankSum=-0.574;QD=3.05;ReadPosRankSum=-0.993;VQSLOD=-0.4602;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:13.01:0,13,93	0/1:12,0:12:4.64:5,0,38	0/1:45,1:17:27.30:27,0,39	0/1:24,0:15:29.49:29,0,30	0/1:24,0:24:17.70:31,0,18	0/0:20,0:20:22.36:0,22,97	0/0:10,0:10:8.06:0,8,82	0/1:30,1:31:53.76:54,0,167	1/1:13,0:13:27.35:123,27,0	0/0:24,0:24:12.29:0,12,170	0/1:19,0:18:18.38:18,0,66	0/0:17,0:17:9.45:0,9,96	0/1:20,0:19:3.17:3,0,46	0/1:16,2:18:4.77:5,0,87	0/0:22,0:22:35.82:0,36,140	0/0:20,0:19:30.40:0,30,104	0/0:30,0:30:32.11:0,32,146	0/0:15,0:15:15.79:0,16,110	0/0:26,0:26:8.81:0,9,166	0/1:17,1:18:13.79:14,0,64	0/0:17,0:17:25.05:0,25,103	0/1:10,0:10:9.02:9,0,22	1/1:1,16:17:12.81:385,13,0	1/1:1,16:17:29.41:398,29,0	0/0:25,0:25:13.91:0,14,106	0/0:18,0:18:17.51:0,18,139	0/1:23,0:23:7.60:8,0,47	0/1:18,0:18:2.79:3,0,29
chr10	20363339	.	CA	C	110.76	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=6.979;DP=584;FS=0.546;HRun=11;HaplotypeScore=102.8861;InbreedingCoeff=0.6197;MQ=71.08;MQ0=9;MQRankSum=-0.605;QD=2.26;ReadPosRankSum=0.936;VQSLOD=-0.2881;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:53.91:0,54,470	0/0:11,1:12:7.41:0,7,246	0/0:45,1:17:11.32:0,11,176	0/0:26,0:17:12.75:0,13,163	0/0:22,1:23:28.06:0,28,384	0/0:20,0:20:36.05:0,36,358	0/0:10,0:10:24.06:0,24,251	0/0:29,1:30:38.02:0,38,594	1/1:7,0:14:18.80:57,19,0	0/0:26,0:26:68.94:0,69,697	0/0:18,1:18:20.31:0,20,364	0/0:16,1:17:10.25:0,10,292	0/0:19,1:19:25.19:0,25,428	0/0:18,0:18:32.25:0,32,391	0/0:22,0:22:51.10:0,51,519	0/0:20,0:19:42.09:0,42,429	0/0:29,1:30:69.08:0,69,672	0/0:14,1:15:0.52:0,1,299	0/0:26,0:26:11.65:0,12,536	0/0:16,1:17:13.23:0,13,323	0/0:18,0:18:39.05:0,39,387	0/0:10,0:10:21.52:0,22,215	0/1:18,0:18:1.42:87,0,1	1/1:17,0:17:1.02:80,1,0	0/0:25,0:25:60:0,60,548	0/0:18,0:18:18.45:0,18,415	0/0:23,0:23:23.17:0,23,345	0/0:18,0:18:24.23:0,24,280
chr10	20363663	.	T	TA	6682.36	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=-12.183;DP=504;FS=4.936;HRun=9;HaplotypeScore=51.4461;InbreedingCoeff=0.9663;MQ=83.25;MQ0=2;MQRankSum=-2.473;QD=26.10;ReadPosRankSum=2.711;VQSLOD=5.4880;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:95.98:0,96,833	0/0:13,0:13:35.91:0,36,299	0/0:27,0:21:6.48:0,6,193	0/0:18,0:17:21.15:0,21,166	0/0:26,0:26:67.79:0,68,576	1/1:3,20:23:31.11:571,31,0	1/1:1,10:11:27.07:299,27,0	0/0:29,0:29:77.97:0,78,672	0/0:21,0:21:50.98:0,51,443	1/1:4,17:21:5.04:489,5,0	1/1:2,16:18:45.12:498,45,0	1/1:1,17:18:45.12:498,45,0	1/1:1,8:9:21.06:232,21,0	1/1:3,12:15:36.10:397,36,0	0/0:9,0:9:23.99:0,24,208	1/1:3,8:11:21.06:232,21,0	1/1:3,25:28:72.19:796,72,0	1/1:1,16:17:39.11:431,39,0	1/1:2,14:16:39.08:416,39,0	1/1:2,15:17:45.12:495,45,0	1/1:0,14:14:36.10:398,36,0	1/1:3,10:13:27.07:299,27,0	1/1:1,11:12:30.08:332,30,0	1/1:3,10:13:27.07:299,27,0	0/0:14,0:14:35.98:0,36,311	0/0:23,0:23:55.95:0,56,460	0/0:25,0:25:62.95:0,63,538	0/0:10,0:10:23.99:0,24,208
chr10	20364196	.	T	TCC	5030.71	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-3.171;DP=674;FS=3.647;HRun=6;HaplotypeScore=85.9630;InbreedingCoeff=0.9867;MQ=82.76;MQ0=0;MQRankSum=0.172;QD=24.78;ReadPosRankSum=-2.273;VQSLOD=3.4535;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,34:38:72:1202,72,0	1/1:2,3:5:9.03:150,9,0	0/0:19,0:19:48.07:0,48,551	0/0:26,0:26:56.69:0,57,652	1/1:2,18:21:45.06:641,45,0	0/0:27,0:27:66.19:0,66,802	0/0:25,0:25:66.20:0,66,804	1/1:8,0:37:70.71:305,71,0	0/0:33,0:33:81.23:0,81,987	0/0:26,0:26:69.19:0,69,817	0/0:10,0:10:21.01:0,21,239	0/0:30,0:30:90.28:0,90,1097	0/0:14,0:14:33.09:0,33,401	0/0:23,0:23:57.16:0,57,681	1/1:2,0:26:42.42:147,42,0	0/0:26,0:26:69.20:0,69,829	0/0:33,0:33:89.05:0,89,1051	0/0:37,0:37:99:0,99,1193	0/0:26,0:26:54.12:0,54,631	0/0:21,0:21:51.13:0,51,597	0/0:29,0:29:75.22:0,75,907	0/0:17,0:17:48.14:0,48,578	0/0:10,0:10:24.07:0,24,291	0/0:39,0:39:99:0,105,1267	1/1:2,10:14:21.07:354,21,0	1/1:3,26:31:81.25:1294,81,0	1/1:2,18:20:42.11:706,42,0	1/1:0,10:11:15.05:231,15,0
chr10	20365925	.	C	CTTTA	31364.55	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-8.726;DP=575;FS=3.074;HRun=0;HaplotypeScore=76.4892;InbreedingCoeff=0.9476;MQ=83.65;MQ0=1;MQRankSum=-10.082;QD=58.74;ReadPosRankSum=5.316;VQSLOD=6.2059;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,17:23:45.15:1110,45,0	1/1:1,2:3:6.02:156,6,0	0/0:25,0:25:65.59:0,66,1100	0/0:16,0:16:44.71:0,45,732	1/1:3,10:13:30.10:765,30,0	1/1:3,17:20:42.14:1085,42,0	1/1:6,17:23:51.17:1323,51,0	1/1:9,20:31:72.23:1767,72,0	1/1:3,16:20:45.15:1139,45,0	1/1:4,19:23:57.19:1414,57,0	1/1:5,13:18:33.11:857,33,0	1/1:2,23:26:72.25:1861,72,0	1/1:4,17:22:54.18:1363,54,0	1/1:2,13:15:36.12:934,36,0	1/1:8,24:32:75.26:1901,75,0	1/1:0,27:27:72.25:1870,72,0	1/1:4,14:19:39.13:1003,39,0	1/1:4,17:20:42.14:1049,42,0	1/1:7,16:23:57.19:1439,57,0	1/1:3,14:17:42.14:1090,42,0	1/1:7,21:28:60.20:1522,60,0	1/1:1,12:14:33.11:857,33,0	1/1:4,17:21:42.14:1090,42,0	1/1:4,14:18:39.13:936,39,0	1/1:4,10:14:33.11:841,33,0	1/1:3,14:18:48.16:1171,48,0	1/1:6,23:30:75.26:1886,75,0	1/1:1,12:15:36.12:935,36,0
chr10	20366228	.	GTA	G	2696.34	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=6.605;DP=283;FS=27.329;HRun=0;HaplotypeScore=52.4590;InbreedingCoeff=0.8167;MQ=50.76;MQ0=11;MQRankSum=0.542;QD=23.45;ReadPosRankSum=4.861;VQSLOD=1.6165;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:45.13:0,45,774	0/0:3,0:3:9.02:0,9,140	0/0:14,0:2:5.93:0,6,49	0/0:12,0:2:2.98:0,3,22	0/0:5,0:5:11.78:0,12,185	1/1:1,4:5:11.96:154,12,0	1/1:1,6:7:6.02:91,6,0	0/0:48,0:46:99:0,138,2237	0/0:4,0:4:12.04:0,12,231	1/1:0,7:7:21.05:298,21,0	1/1:0,7:7:9.03:137,9,0	1/1:1,7:8:15.05:229,15,0	1/1:0,6:6:15.05:229,15,0	1/1:1,4:4:9.03:137,9,0	0/0:10,0:10:27.06:0,27,443	1/1:1,3:4:9.03:137,9,0	1/1:3,16:17:8.32:225,8,0	1/1:2,16:18:21.27:376,21,0	1/1:2,7:9:22.28:298,22,0	1/1:0,4:4:12.04:183,12,0	1/1:0,8:8:12.04:183,12,0	1/1:0,1:1:3.01:46,3,0	1/1:1,3:4:9.03:137,9,0	1/1:0,3:3:3.01:46,3,0	0/0:11,0:11:14.52:0,15,189	0/0:12,0:12:31.56:0,32,563	0/0:16,0:16:35.52:0,36,561	0/0:11,0:9:15.23:0,15,329
chr10	20366270	.	G	GTATATA	1489.99	PASS	AB=0.869;AC=31;AF=0.705;AN=44;BaseQRankSum=-1.732;DP=241;FS=4.626;HRun=0;HaplotypeScore=77.6558;InbreedingCoeff=0.1387;MQ=66.99;MQ0=4;MQRankSum=-1.963;QD=8.05;ReadPosRankSum=-0.504;VQSLOD=0.9890;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:7,8:21:9.03:117,9,0	1/1:3,0:3:3.01:49,3,0	0/0:14,0:5:2.38:0,2,10	0/0:20,0:10:5.18:0,5,16	./.	1/1:1,0:2:3.01:78,3,0	1/1:7,0:7:3.46:25,3,0	0/1:16,0:31:40.38:40,0,172	0/1:2,0:4:2.90:3,0,75	./.	1/1:6,0:6:2.90:16,3,0	1/1:7,0:7:3:25,3,0	./.	0/1:5,0:5:0:0,0,0	0/1:1,0:6:1.64:2,0,61	0/1:3,0:3:0:0,0,0	0/1:19,0:21:5.87:89,0,6	0/1:19,0:20:20.34:194,0,20	1/1:5,0:5:11.59:153,12,0	1/1:1,0:1:2.99:23,3,0	0/0:3,0:3:0.47:0,0,1	./.	./.	./.	1/1:4,2:14:9.03:117,9,0	1/1:1,6:9:20.95:560,21,0	1/1:4,2:13:6.02:77,6,0	1/1:3,0:7:3.01:39,3,0
chr10	20367546	.	GT	G	5708.74	PASS	AB=0.895;AC=34;AF=0.607;AN=56;BaseQRankSum=8.038;DP=629;FS=14.916;HRun=12;HaplotypeScore=105.9215;InbreedingCoeff=0.8219;MQ=71.89;MQ0=0;MQRankSum=-2.307;QD=15.18;ReadPosRankSum=2.342;VQSLOD=4.1594;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:47:74.81:0,75,505	0/0:6,0:11:20.38:0,20,148	0/1:13,1:13:3.13:3,0,136	0/1:10,1:12:18.69:19,0,100	0/0:7,0:31:76.43:0,76,483	1/1:4,13:17:8.39:248,8,0	1/1:6,16:23:46.85:354,47,0	0/0:28,0:30:65.96:0,66,649	0/0:21,0:21:48.08:0,48,481	1/1:7,21:28:56.68:434,57,0	1/1:7,19:26:26.24:382,26,0	1/1:3,12:16:7.44:228,7,0	1/1:7,16:24:1.34:321,1,0	1/1:3,19:22:53.75:418,54,0	0/0:24,1:26:45.72:0,46,619	1/1:2,17:19:50.77:395,51,0	1/1:2,24:27:61.79:470,62,0	1/1:1,13:15:31.90:238,32,0	1/1:4,14:19:16.40:295,16,0	1/1:5,26:33:52.70:575,53,0	1/1:3,7:9:17.93:139,18,0	1/1:3,17:21:52.82:400,53,0	1/1:4,19:24:47.72:371,48,0	1/1:2,23:26:31.37:416,31,0	0/0:5,0:22:27.10:0,27,133	0/0:3,0:19:45.76:0,46,249	0/0:4,0:26:59.95:0,60,321	0/0:9,0:20:28.90:0,29,191
chr10	20370281	.	GGTGTGTGTGTGT	G	2166.57	PASS	AB=0.872;AC=31;AF=0.674;AN=46;BaseQRankSum=4.125;DP=527;FS=4.316;HRun=0;HaplotypeScore=168.3837;InbreedingCoeff=0.2940;MQ=57.19;MQ0=24;MQRankSum=-3.585;QD=7.37;ReadPosRankSum=-1.265;VQSLOD=2.5703;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:22:3.94:0,4,126	0/0:9,0:7:6.02:0,6,177	./.	./.	0/0:16,0:18:2.89:0,3,66	1/1:14,0:18:6.01:108,6,0	1/1:17,8:26:6.02:147,6,0	./.	1/1:6,0:14:21.06:502,21,0	1/1:19,0:19:3.01:58,3,0	./.	1/1:13,4:16:9.03:220,9,0	1/1:11,3:14:9.03:174,9,0	1/1:11,1:14:6:102,6,0	1/1:16,0:22:3.01:84,3,0	1/1:7,5:11:3.48:103,3,0	1/1:26,5:31:12.04:372,12,0	0/1:15,0:18:37.07:37,0,150	1/1:11,0:11:5.96:46,6,0	1/1:15,6:22:6:89,6,0	0/0:29,0:26:0:0,0,0	1/1:10,4:15:3.48:39,3,0	1/1:8,3:12:6.02:108,6,0	./.	0/0:15,0:15:11.99:0,12,133	0/1:15,0:13:20.16:20,0,53	0/0:17,0:19:3.91:0,4,127	0/1:7,1:9:35.71:98,0,36
chr10	20371449	.	CTCTCTA	C	3928.84	PASS	AB=0.896;AC=30;AF=0.536;AN=56;BaseQRankSum=-4.132;DP=589;FS=26.810;HRun=0;HaplotypeScore=154.7771;InbreedingCoeff=0.1030;MQ=43.00;MQ0=41;MQRankSum=1.533;QD=9.97;ReadPosRankSum=2.790;VQSLOD=0.9194;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:27:11.76:0,12,268	0/1:14,0:14:55.46:55,0,186	0/0:33,0:2:6.02:0,6,114	0/0:57,0:12:23.86:0,24,481	0/1:15,0:14:1.98:2,0,232	1/1:10,2:16:17.63:428,18,0	1/1:22,1:23:3.92:91,4,0	0/1:36,0:33:79.22:79,0,703	0/0:18,0:18:14.83:0,15,191	0/1:7,6:13:7.90:326,0,8	0/1:2,8:16:0:0,0,0	1/1:14,1:18:2.15:250,2,0	0/1:18,0:21:72.11:227,0,72	1/1:9,1:12:18:289,18,0	0/1:23,0:23:1.90:2,0,236	1/1:11,0:11:10.22:438,10,0	1/1:15,0:19:14.51:381,15,0	0/1:11,0:13:4.02:162,0,4	1/1:4,6:10:3.94:280,4,0	1/1:9,1:13:7.27:111,7,0	0/0:5,16:20:4.49:0,4,28	0/0:9,10:22:1.82:0,2,5	1/1:9,3:14:12.87:312,13,0	0/1:30,2:31:12.13:331,0,12	0/1:18,0:19:65.35:65,0,118	0/1:20,0:19:54.95:55,0,569	0/1:23,0:23:43.18:43,0,128	0/0:11,0:9:5.46:0,5,63
chr10	20371451	.	CTCT	C	2131.44	PASS	AB=0.947;AC=28;AF=0.500;AN=56;BaseQRankSum=2.944;DP=574;FS=0.535;HRun=0;HaplotypeScore=148.5261;InbreedingCoeff=0.2241;MQ=43.31;MQ0=39;MQRankSum=2.947;QD=6.68;ReadPosRankSum=4.627;VQSLOD=2.8701;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:26:11.77:0,12,76	0/1:12,0:13:5.05:5,0,125	0/0:30,0:2:6.02:0,6,121	0/0:48,0:11:3.64:0,4,276	0/0:16,0:15:14.82:0,15,121	1/1:18,0:17:29.62:287,30,0	1/1:19,0:24:30.82:184,31,0	0/0:35,0:32:80.90:0,81,978	0/0:18,0:18:1.79:0,2,21	0/1:15,0:14:44.36:197,0,44	1/1:17,2:18:3:38,3,0	0/1:18,1:18:10.26:152,0,10	1/1:20,0:20:2.62:209,3,0	1/1:9,0:9:9.02:93,9,0	0/0:23,0:23:26.22:0,26,181	1/1:11,1:11:20.39:220,20,0	0/1:17,3:19:21.74:210,0,22	0/1:11,1:12:16.59:78,0,17	0/1:10,0:10:44.75:57,0,45	1/1:13,1:12:2.13:26,2,0	1/1:19,2:19:1.70:6,2,0	0/0:22,0:22:1.72:0,2,6	1/1:16,0:15:19.73:195,20,0	1/1:34,1:30:25.77:277,26,0	0/1:18,1:19:22.12:22,0,27	0/0:20,0:19:15.63:0,16,431	0/1:22,0:23:12.93:49,0,13	0/0:12,0:10:0:0,0,0
chr10	20371453	.	CTACACACA	C	2505.26	PASS	AB=0.857;AC=29;AF=0.518;AN=56;BaseQRankSum=-3.252;DP=563;FS=18.003;HRun=0;HaplotypeScore=167.9801;InbreedingCoeff=-0.1856;MQ=43.84;MQ0=34;MQRankSum=1.238;QD=5.75;ReadPosRankSum=0.611;VQSLOD=1.5379;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:4,23:23:8.90:59,9,0	1/1:1,12:13:26.88:447,27,0	0/0:24,0:2:5.89:0,6,37	0/1:42,0:11:18.07:18,0,72	1/1:0,16:15:11.90:116,12,0	0/1:10,0:17:62.17:62,0,434	0/1:20,0:25:99:191,0,129	0/1:33,0:30:79.19:157,0,79	0/1:18,0:18:7.14:7,0,12	0/1:14,0:15:54.80:55,0,659	0/0:15,0:18:3.01:0,3,78	0/1:12,0:18:50.77:51,0,326	0/1:9,0:20:15.36:15,0,879	0/1:7,0:10:35.74:36,0,169	0/0:22,0:22:18.03:0,18,446	0/1:10,0:11:85.02:85,0,218	0/1:16,0:19:95.44:95,0,294	0/1:11,0:13:20.27:20,0,332	0/1:8,0:10:69.86:70,0,145	0/0:9,0:13:6.46:0,6,103	0/0:24,0:23:8.26:0,8,259	0/0:14,0:22:1.94:0,2,5	0/1:13,0:16:58.51:59,0,307	0/1:29,0:31:59.76:60,0,446	1/1:1,15:17:5.85:43,6,0	1/1:1,19:19:41.52:380,42,0	1/1:2,18:21:23.76:503,24,0	1/1:2,10:10:6.02:145,6,0
chr10	20372256	.	GA	G	2199.35	PASS	AB=0.652;AC=45;AF=0.804;AN=56;BaseQRankSum=0.601;DP=479;FS=0.000;HRun=15;HaplotypeScore=71.4984;InbreedingCoeff=0.1466;MQ=57.36;MQ0=10;MQRankSum=1.032;QD=4.82;ReadPosRankSum=2.611;VQSLOD=1.8093;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:13,0:37:7.78:62,0,8	1/1:2,0:4:4.04:12,4,0	0/0:6,0:2:4.96:0,5,19	0/1:6,1:7:10.24:10,0,32	1/1:2,1:17:25.32:84,25,0	1/1:6,9:18:29.70:171,30,0	1/1:6,10:19:33.82:183,34,0	1/1:5,1:19:20.28:58,20,0	0/0:7,0:17:26.09:0,26,161	1/1:12,2:18:21.58:126,22,0	1/1:5,6:10:13.80:83,14,0	1/1:18,8:25:3.27:126,3,0	0/1:7,5:12:8.74:78,0,9	1/1:6,7:13:13.78:83,14,0	1/1:5,0:15:18.32:53,18,0	0/1:9,14:25:13.05:176,0,13	1/1:8,8:17:22.62:140,23,0	1/1:7,13:19:31.47:198,31,0	1/1:10,5:16:12.60:67,13,0	1/1:5,7:12:1.60:96,2,0	1/1:7,6:13:14.76:96,15,0	1/1:6,9:13:11.52:77,12,0	0/1:4,9:12:5.97:94,0,6	0/1:3,11:12:14.50:46,0,14	1/1:8,2:22:23.24:78,23,0	1/1:8,1:21:21.36:73,21,0	1/1:9,0:19:18.28:53,18,0	0/1:5,0:12:13.14:29,0,13
chr10	20374425	.	T	TC	666.40	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-5.497;DP=525;FS=6.139;HRun=5;HaplotypeScore=51.0862;InbreedingCoeff=0.9290;MQ=70.29;MQ0=1;MQRankSum=0.258;QD=26.66;ReadPosRankSum=-3.414;VQSLOD=1.6168;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:72.17:0,72,767	0/0:4,0:4:9.02:0,9,97	0/0:19,0:18:48.12:0,48,510	0/0:18,0:18:35.04:0,35,333	0/0:32,0:32:81.20:0,81,869	0/0:19,0:19:57.14:0,57,612	0/0:28,0:28:78.20:0,78,838	1/1:4,21:25:60.17:761,60,0	0/0:17,0:17:51.13:0,51,548	0/0:18,0:18:54.13:0,54,575	0/0:9,0:9:24.06:0,24,258	0/0:17,0:17:48.12:0,48,516	0/0:18,0:18:48.09:0,48,501	0/0:15,0:15:45.11:0,45,483	0/0:25,0:25:63.16:0,63,677	0/0:17,0:17:48.12:0,48,515	0/0:23,0:23:66.16:0,66,707	0/0:21,0:21:60.09:0,60,625	0/0:19,0:18:48.09:0,48,499	0/0:21,0:21:63.16:0,63,676	0/0:14,0:14:36.05:0,36,367	0/0:20,0:20:60.13:0,60,630	0/0:20,0:20:60.14:0,60,636	0/0:15,0:15:36.09:0,36,386	0/0:22,0:22:60.14:0,60,638	0/0:21,0:21:60.15:0,60,645	0/0:15,0:14:42.11:0,42,451	0/0:5,0:5:15.04:0,15,161
chr10	20374484	.	AAC	A	765.62	PASS	AB=0.888;AC=26;AF=0.591;AN=44;BaseQRankSum=3.446;DP=486;FS=0.000;HRun=0;HaplotypeScore=66.6370;InbreedingCoeff=0.1678;MQ=66.34;MQ0=17;MQRankSum=0.018;QD=2.53;ReadPosRankSum=-2.170;VQSLOD=1.1313;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:24,1:28:11.65:80,12,0	./.	./.	./.	0/1:24,0:23:23.21:23,0,55	1/1:10,3:14:6.02:64,6,0	1/1:31,2:32:17.34:135,17,0	0/0:14,0:11:0:0,0,0	1/1:10,0:16:11.32:55,11,0	1/1:11,0:10:3:32,3,0	1/1:13,2:15:5.99:55,6,0	1/1:6,3:10:8.85:78,9,0	./.	./.	0/0:14,0:18:9.02:0,9,113	0/1:14,0:15:6.84:7,0,37	0/1:29,5:33:28.40:28,0,346	0/1:18,1:19:52.39:52,0,76	1/1:13,0:13:3.01:32,3,0	0/0:14,0:14:6.02:0,6,87	0/0:27,0:25:12.01:0,12,133	0/0:13,0:13:3.01:0,3,44	1/1:10,1:11:3.01:32,3,0	1/1:21,2:24:14.69:124,15,0	0/1:18,6:24:18.04:26,0,18	0/0:16,0:15:2.99:0,3,24	0/1:7,3:10:11.86:85,0,12	./.
chr10	20375000	.	C	CGT	419.79	PASS	AB=1.000;AC=20;AF=0.400;AN=50;BaseQRankSum=1.416;DP=569;FS=8.544;HRun=0;HaplotypeScore=91.7927;InbreedingCoeff=0.4455;MQ=70.03;MQ0=6;MQRankSum=-1.947;QD=1.55;ReadPosRankSum=-1.882;VQSLOD=0.7328;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:40,0:38:15.80:136,16,0	./.	./.	./.	1/1:11,2:15:2.92:44,3,0	0/1:18,0:18:14.11:14,0,59	0/0:31,0:32:22.58:0,23,167	0/1:29,0:29:0:0,0,0	0/0:15,0:15:11.71:0,12,103	0/0:21,0:21:2.14:0,2,22	0/1:11,0:12:1.76:2,0,87	0/0:23,0:23:10.47:0,10,54	0/0:14,0:14:15.98:0,16,133	0/0:25,0:24:5.39:0,5,24	1/1:4,5:9:6.01:71,6,0	0/0:17,0:18:18.49:0,18,151	0/0:20,0:20:20.02:0,20,178	0/1:18,0:19:18.82:19,0,104	0/0:16,0:16:1.68:0,2,8	0/0:19,0:19:5.78:0,6,36	0/1:47,0:46:1.18:19,0,1	0/1:11,0:11:0.05:0,0,0	0/0:11,0:12:8.85:0,9,76	0/0:26,0:26:12.91:0,13,122	1/1:14,0:14:6.48:70,6,0	1/1:23,0:23:12:142,12,0	1/1:15,0:15:5.46:44,5,0	1/1:17,0:17:2.80:13,3,0
chr10	20376389	.	CCA	C	1551.11	PASS	AB=0.977;AC=23;AF=0.411;AN=56;BaseQRankSum=-0.469;DP=543;FS=12.800;HRun=0;HaplotypeScore=112.4561;InbreedingCoeff=0.0187;MQ=73.42;MQ0=7;MQRankSum=0.116;QD=4.06;ReadPosRankSum=6.126;VQSLOD=1.1838;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:38,0:38:12.86:13,0,113	0/0:4,0:4:7.03:0,7,24	0/0:30,0:17:11.29:0,11,252	0/0:26,0:18:23.79:0,24,283	0/1:16,0:15:31.29:31,0,83	1/1:17,3:20:19.26:152,19,0	0/1:20,0:20:52.69:53,0,140	0/0:16,0:16:22.81:0,23,347	0/0:7,0:7:17.07:0,17,98	0/1:12,0:12:56.15:58,0,56	1/1:8,0:8:11.53:47,12,0	0/1:14,2:16:55.83:81,0,56	0/1:15,1:16:7.42:152,0,7	0/1:20,0:20:36.99:95,0,37	0/0:8,0:8:24.01:0,24,276	0/1:15,0:14:17.89:56,0,18	1/1:44,1:44:5.43:303,5,0	0/1:24,2:26:0.94:116,0,1	0/1:24,0:24:24.69:25,0,153	0/1:9,0:9:6.68:7,0,52	0/1:29,0:28:45.06:91,0,45	0/1:14,1:15:48.31:71,0,48	1/1:10,0:10:19.70:77,20,0	1/1:43,0:42:64.55:302,65,0	0/0:23,0:23:36.78:0,37,208	0/0:20,0:20:25.54:0,26,114	0/0:18,0:18:3.43:0,3,53	0/0:9,0:9:1.32:0,1,32
chr10	20376391	.	ACC	A	8181.20	PASS	AB=0.895;AC=47;AF=0.839;AN=56;BaseQRankSum=-5.769;DP=538;FS=9.683;HRun=11;HaplotypeScore=90.5222;InbreedingCoeff=0.7836;MQ=71.00;MQ0=7;MQRankSum=-0.829;QD=17.56;ReadPosRankSum=4.001;VQSLOD=3.1853;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,2:38:80.42:444,80,0	1/1:0,0:4:8.11:38,8,0	0/0:31,0:15:5.56:0,6,211	0/0:25,0:17:15.26:0,15,183	1/1:4,0:15:31.25:185,31,0	1/1:4,15:19:51.11:535,51,0	1/1:8,11:19:18.01:192,18,0	0/1:15,1:17:11.16:11,0,170	0/0:3,0:7:12.86:0,13,49	1/1:3,9:12:27.04:284,27,0	1/1:0,7:8:20.71:188,21,0	1/1:5,10:15:24.04:255,24,0	1/1:3,13:16:39.09:415,39,0	1/1:3,16:19:33.08:352,33,0	0/0:7,0:7:18.03:0,18,242	1/1:2,14:15:23.89:255,24,0	1/1:5,39:43:93.20:983,93,0	1/1:4,22:26:45.11:478,45,0	1/1:7,17:24:51.07:531,51,0	1/1:3,3:8:5.70:96,6,0	1/1:6,21:26:53.99:558,54,0	1/1:6,8:15:29.38:277,29,0	1/1:0,10:10:24.06:255,24,0	1/1:1,42:42:96.22:1020,96,0	1/1:9,0:23:48.91:271,49,0	1/1:3,1:19:37.43:261,37,0	1/1:4,0:19:37.01:208,37,0	1/1:1,1:9:14.47:89,14,0
chr10	20376744	.	T	TG	5902.88	PASS	AB=0.991;AC=45;AF=0.804;AN=56;BaseQRankSum=-3.831;DP=555;FS=30.362;HRun=6;HaplotypeScore=81.6256;InbreedingCoeff=-0.0518;MQ=78.71;MQ0=0;MQRankSum=-3.434;QD=11.14;ReadPosRankSum=0.049;VQSLOD=1.7589;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,32:39:59.75:879,60,0	1/1:1,7:8:21.48:246,21,0	0/1:17,1:15:15.01:15,0,124	0/0:25,0:19:3.46:0,3,171	1/1:2,13:15:36:412,36,0	0/1:15,0:15:9.16:43,0,9	1/1:25,0:25:5.23:105,5,0	1/1:6,15:21:44.99:478,45,0	1/1:21,0:21:7.40:77,7,0	1/1:10,0:10:9.57:66,10,0	1/1:11,0:11:10.19:97,10,0	1/1:23,0:23:12.76:150,13,0	1/1:20,0:20:5.86:88,6,0	1/1:15,1:16:20.40:185,20,0	1/1:6,21:27:54.16:663,54,0	1/1:16,0:16:14.56:149,15,0	0/1:33,0:33:9.89:51,0,10	0/1:30,1:31:32.67:124,0,33	0/1:19,0:19:24.61:123,0,25	0/1:9,0:9:22.37:22,0,24	0/1:24,0:24:46.94:63,0,47	1/1:14,0:14:6.41:40,6,0	0/1:12,0:12:2.58:3,0,3	0/1:35,0:35:19.08:98,0,19	1/1:2,14:16:33.10:395,33,0	1/1:2,17:19:48.08:547,48,0	1/1:3,23:26:48.01:592,48,0	1/1:1,6:7:15.52:190,16,0
chr10	20377235	.	TCACACA	T	1473.82	PASS	AB=1.000;AC=29;AF=0.725;AN=40;BaseQRankSum=2.404;DP=532;FS=3.381;HRun=0;HaplotypeScore=122.5485;InbreedingCoeff=0.3721;MQ=68.64;MQ0=11;MQRankSum=-2.378;QD=5.26;ReadPosRankSum=-0.273;VQSLOD=2.4948;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	1/1:6,0:10:6.49:84,6,0	./.	./.	1/1:8,0:14:3.01:42,3,0	0/0:16,0:16:0.47:0,0,1	0/1:34,0:31:62.44:166,0,62	0/0:28,0:27:0.47:0,0,1	0/0:18,0:17:12.03:0,12,259	./.	./.	1/1:14,1:15:6.02:117,6,0	1/1:18,0:21:9.02:143,9,0	1/1:15,4:19:11.87:193,12,0	1/1:19,6:25:9.03:179,9,0	1/1:14,4:18:8.52:128,9,0	1/1:20,0:19:3:59,3,0	0/0:14,0:13:11.07:0,11,109	./.	1/1:10,2:10:3.01:57,3,0	1/1:34,0:34:9.02:124,9,0	./.	./.	0/0:28,0:27:0:0,0,0	1/1:13,0:11:1.55:4,2,0	1/1:19,0:20:3.01:42,3,0	1/1:9,0:12:2.40:41,2,0	1/1:6,0:13:15.05:209,15,0
chr10	20378934	.	G	GT	68.35	PASS	AB=1.000;AC=10;AF=0.833;AN=12;BaseQRankSum=-2.367;DP=35;FS=2.533;HRun=1;HaplotypeScore=13.3072;MQ=113.98;MQ0=0;MQRankSum=-0.380;QD=3.60;ReadPosRankSum=-1.977;VQSLOD=-0.4803;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	1/1:1,0:1:2.98:22,3,0	0/1:6,0:6:13.14:13,0,72	0/1:4,0:5:15.56:16,0,38	./.	./.	./.	1/1:2,0:2:3:26,3,0	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	1/1:1,0:1:3:25,3,0	./.	./.	./.	./.	1/1:1,0:1:3.01:43,3,0	./.	./.	./.
chr10	20380095	.	GAA	G	5049.25	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=11.489;DP=549;FS=1.797;HRun=2;HaplotypeScore=71.9105;InbreedingCoeff=0.9961;MQ=69.40;MQ0=0;MQRankSum=1.179;QD=45.49;ReadPosRankSum=2.340;VQSLOD=4.7878;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,31:31:87.30:1418,87,0	1/1:0,9:9:27.09:440,27,0	0/0:14,0:13:39.06:0,39,712	0/0:13,0:13:27.06:0,27,435	1/1:0,12:12:32.15:505,32,0	0/0:17,0:17:51.13:0,51,957	0/0:33,0:33:99:0,99,1882	0/0:28,0:27:81.24:0,81,1509	0/0:20,0:20:60.15:0,60,1120	0/0:10,0:10:30.10:0,30,609	0/0:9,0:9:27.09:0,27,548	0/0:32,0:32:96.33:0,96,1944	0/0:19,0:19:57.20:0,57,1143	0/0:23,0:23:66.23:0,66,1318	0/0:16,0:16:45.14:0,45,878	0/0:19,0:19:54.15:0,54,1057	0/0:37,0:37:99:0,108,2132	0/0:21,0:21:57.20:0,57,1142	0/0:20,0:20:60.21:0,60,1219	0/0:10,0:10:30.10:0,30,600	0/0:50,0:50:99:0,147,2861	0/0:15,0:15:45.15:0,45,903	0/0:9,0:9:27.05:0,27,428	0/0:23,0:23:69.19:0,69,1340	1/1:0,17:17:51.17:828,51,0	1/1:0,16:16:48.14:736,48,0	1/1:0,21:21:54.18:877,54,0	1/1:0,5:5:15.05:245,15,0
chr10	20380196	.	C	CAAGGGTTTTGTTAT	19013.71	PASS	AB=0.600;AC=51;AF=0.911;AN=56;BaseQRankSum=1.052;DP=184;FS=3.556;HRun=0;HaplotypeScore=84.3034;InbreedingCoeff=0.4679;MQ=47.30;MQ0=19;MQRankSum=-2.723;QD=122.67;ReadPosRankSum=2.940;VQSLOD=4.6641;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,3:8:12.03:625,12,0	1/1:0,2:2:6.02:400,6,0	0/0:13,0:1:3.01:0,3,35	0/0:16,0:6:14.58:0,15,305	1/1:1,4:5:15.05:801,15,0	1/1:3,7:10:24.07:1418,24,0	1/1:5,1:6:12.03:328,12,0	1/1:5,0:4:6.01:76,6,0	1/1:3,3:6:18.06:776,18,0	1/1:1,4:5:12.04:807,12,0	1/1:2,4:6:15.05:813,15,0	1/1:4,4:8:21.07:1080,21,0	1/1:6,2:8:15.03:680,15,0	1/1:1,5:6:15.05:995,15,0	1/1:3,6:9:27.07:1302,27,0	1/1:0,6:6:18.06:1201,18,0	1/1:6,3:8:18.01:714,18,0	1/1:3,2:5:10.56:429,11,0	1/1:4,2:6:12.04:492,12,0	1/1:4,3:7:12.93:648,13,0	1/1:3,0:2:5.96:46,6,0	1/1:2,2:4:9.02:428,9,0	1/1:2,2:4:6.02:400,6,0	0/1:1,2:3:33.50:192,0,33	1/1:2,7:9:27.09:1601,27,0	1/1:1,3:4:12.04:658,12,0	1/1:1,5:6:18.06:1096,18,0	1/1:0,5:5:15.05:1007,15,0
chr10	20380197	.	C	CATAATGAG	31245.52	PASS	AB=0.882;AC=50;AF=0.893;AN=56;BaseQRankSum=4.444;DP=390;FS=6.079;HRun=0;HaplotypeScore=259.4344;InbreedingCoeff=0.4891;MQ=35.98;MQ0=20;MQRankSum=-6.312;QD=86.31;ReadPosRankSum=5.552;VQSLOD=4.3308;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,3:21:48.16:1657,48,0	1/1:1,2:3:9.03:354,9,0	0/0:13,0:1:3.01:0,3,58	0/0:14,0:5:8.87:0,9,216	1/1:14,4:18:38.16:1245,38,0	1/1:10,7:17:42.14:1624,42,0	0/1:15,1:16:6.16:1207,0,6	1/1:19,0:17:47.83:1541,48,0	1/1:10,3:13:3.92:1036,4,0	1/1:14,4:18:54.19:1934,54,0	1/1:8,4:12:30.05:941,30,0	1/1:11,4:15:9.52:1129,10,0	1/1:14,2:16:13.42:1312,13,0	1/1:7,5:12:30.10:1121,30,0	1/1:7,6:13:12.98:1265,13,0	1/1:8,6:14:42.14:1613,42,0	0/1:11,3:13:1.12:798,0,1	1/1:13,2:14:39.13:1488,39,0	1/1:15,2:17:21.32:1401,21,0	1/1:7,3:10:20.86:759,21,0	1/1:9,0:8:9.03:366,9,0	1/1:10,2:12:30.10:1055,30,0	1/1:8,2:10:18.06:644,18,0	1/1:4,2:6:12.04:382,12,0	1/1:10,7:17:47.37:1611,47,0	1/1:16,3:19:53.77:2060,54,0	1/1:14,5:18:53.39:1991,53,0	1/1:1,5:6:18.06:713,18,0
chr10	20380566	.	G	GGAGAGAGA	1807.32	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-3.106;DP=648;FS=6.762;HRun=0;HaplotypeScore=164.4999;InbreedingCoeff=0.9984;MQ=68.40;MQ0=6;MQRankSum=-5.780;QD=69.51;ReadPosRankSum=-0.699;VQSLOD=3.4018;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:81.20:0,81,1725	0/0:11,0:11:33.09:0,33,745	0/0:33,0:29:86.84:0,87,1288	0/0:31,0:24:39.38:0,39,849	0/0:20,0:20:46.54:0,47,1221	0/0:25,0:25:72.15:0,72,1696	0/0:28,0:28:78.20:0,78,1609	0/0:19,0:17:37.74:0,38,518	0/0:21,0:21:60.17:0,60,1414	0/0:27,0:27:71.14:0,71,1410	0/0:16,0:16:45.09:0,45,1022	0/0:25,0:25:66.19:0,66,1530	0/0:28,0:28:81.19:0,81,1828	0/0:25,0:25:75.20:0,75,1738	1/1:7,17:26:45.15:1902,45,0	0/0:21,0:21:63.14:0,63,1316	0/0:23,0:23:63.15:0,63,1415	0/0:19,0:19:48.10:0,48,1057	0/0:18,0:18:45.07:0,45,792	0/0:20,0:20:59.90:0,60,1106	0/0:36,0:36:96.18:0,96,2044	0/0:12,0:12:36.10:0,36,846	0/0:16,0:16:45.09:0,45,943	0/0:35,0:35:90.14:0,90,1961	0/0:23,0:22:57.15:0,57,1258	0/0:27,0:27:75.14:0,75,1462	0/0:24,0:23:66.09:0,66,1468	0/0:9,0:9:27.08:0,27,693
chr10	20383141	.	CCTGACACATGCCAGAGTTT	C	1703.83	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.309;DP=676;FS=3.226;HRun=0;HaplotypeScore=358.7705;InbreedingCoeff=0.9992;MQ=88.49;MQ0=0;MQRankSum=-3.679;QD=89.68;ReadPosRankSum=-2.236;VQSLOD=2.0700;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:96.22:0,96,7745	0/0:12,0:12:33.10:0,33,2363	0/0:27,0:27:78.19:0,78,3335	0/0:23,0:23:63.12:0,63,4308	0/0:22,0:22:57.05:0,57,4494	0/0:17,0:17:51.18:0,51,3940	0/0:36,0:36:99:0,108,7847	1/1:0,19:19:57.19:1799,57,0	0/0:29,0:29:87.30:0,87,6476	0/0:27,0:27:75.26:0,75,5460	0/0:11,0:11:33.11:0,33,2689	0/0:35,0:35:99:0,102,7674	0/0:28,0:28:84.29:0,84,6612	0/0:25,0:25:75.26:0,75,5462	0/0:26,0:26:78.25:0,78,6135	0/0:21,0:20:63.22:0,63,4957	0/0:31,0:31:93.32:0,93,7474	0/0:38,0:38:99:0,114,8400	0/0:24,0:24:72.25:0,72,4675	0/0:20,0:20:60.19:0,60,4665	0/0:30,0:30:90.31:0,90,6725	0/0:23,0:23:69.22:0,69,4817	0/0:16,0:16:48.13:0,48,3113	0/0:36,0:36:99:0,108,8230	0/0:13,0:13:39.13:0,39,3387	0/0:24,0:24:72.24:0,72,6193	0/0:17,0:17:51.18:0,51,4448	0/0:11,0:11:33.11:0,33,3067
chr10	20383313	.	A	AG	21393.57	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-8.383;DP=693;FS=0.658;HRun=5;HaplotypeScore=66.9252;InbreedingCoeff=0.9840;MQ=87.02;MQ0=0;MQRankSum=-9.792;QD=33.17;ReadPosRankSum=5.194;VQSLOD=5.0290;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,30:32:87.28:1144,87,0	1/1:0,14:14:30.10:395,30,0	0/0:22,0:22:50.94:0,51,522	0/0:26,0:26:48.80:0,49,504	1/1:1,23:24:60.13:760,60,0	1/1:5,21:26:54.18:711,54,0	1/1:4,23:28:60.20:789,60,0	1/1:3,28:31:84.22:1064,84,0	1/1:0,22:22:66.21:868,66,0	1/1:3,33:36:93.23:1151,93,0	1/1:0,21:21:45.15:585,45,0	1/1:3,30:33:90.29:1169,90,0	1/1:2,23:25:66.21:868,66,0	1/1:1,23:24:69.22:908,69,0	1/1:0,26:26:78.25:1026,78,0	1/1:0,27:27:78.25:1026,78,0	1/1:0,31:31:87.28:1145,87,0	1/1:2,22:24:63.20:827,63,0	1/1:3,13:16:39.13:510,39,0	1/1:5,22:27:63.20:820,63,0	1/1:2,17:19:45.15:592,45,0	1/1:2,28:30:75.14:986,75,0	1/1:0,17:17:39.13:513,39,0	1/1:2,32:34:81.26:1066,81,0	1/1:0,19:19:42.14:553,42,0	1/1:2,24:26:72.21:931,72,0	1/1:3,26:28:63.20:829,63,0	1/1:0,4:4:12.04:158,12,0
chr10	20384369	.	C	CCG	1222.96	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.206;DP=584;FS=10.753;HRun=0;HaplotypeScore=105.8570;InbreedingCoeff=0.9977;MQ=90.52;MQ0=0;MQRankSum=-6.948;QD=34.94;ReadPosRankSum=-3.816;VQSLOD=4.3589;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,120,1793	0/0:12,0:12:36.11:0,36,554	0/0:32,0:33:78.47:0,78,1247	0/0:23,0:23:59.73:0,60,863	0/0:20,0:20:60.15:0,60,886	0/0:17,0:17:51.16:0,51,775	0/0:26,0:26:78.27:0,78,1239	1/1:3,17:21:59.62:851,60,0	0/0:12,0:12:36.12:0,36,571	0/0:28,0:28:81.20:0,81,1243	0/0:16,0:16:45.14:0,45,682	0/0:25,0:25:75.26:0,75,1194	0/0:17,0:17:51.17:0,51,810	0/0:16,0:16:48.16:0,48,744	1/1:2,12:14:41.77:493,42,0	0/0:20,0:20:60.19:0,60,934	0/0:27,0:26:80.97:0,81,1208	0/0:21,0:21:60.19:0,60,923	0/0:24,0:24:69.18:0,69,1027	0/0:20,0:20:57.11:0,57,842	0/0:34,0:34:99:0,99,1555	0/0:16,0:16:48.15:0,48,737	0/0:14,0:14:36.07:0,36,485	0/0:21,0:21:63.05:0,63,890	0/0:20,0:20:57.18:0,57,876	0/0:23,0:23:69.23:0,69,1077	0/0:17,0:17:51.09:0,51,781	0/0:7,0:7:21.04:0,21,309
chr10	20384370	.	AC	A	188.79	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.920;DP=585;FS=8.492;HRun=5;HaplotypeScore=96.7343;InbreedingCoeff=0.9958;MQ=90.47;MQ0=0;MQRankSum=-6.234;QD=5.55;ReadPosRankSum=-1.638;VQSLOD=-0.4289;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,120,1610	0/0:12,0:12:36.11:0,36,476	0/0:33,0:33:85.03:0,85,1046	0/0:23,0:23:51.07:0,51,614	0/0:21,0:21:57.18:0,57,761	0/0:17,0:17:41.43:0,41,647	0/0:26,0:26:75.25:0,75,1025	1/1:12,9:21:22.04:152,22,0	0/0:12,0:12:33.11:0,33,447	0/0:27,0:27:77.81:0,78,1046	0/0:17,0:17:51.15:0,51,677	0/0:25,0:25:75.24:0,75,1005	0/0:18,0:18:54.15:0,54,704	0/0:16,0:16:48.16:0,48,656	1/1:1,12:13:32.51:157,33,0	0/0:20,0:20:57.19:0,57,776	0/0:27,0:26:75.22:0,75,1004	0/0:21,0:21:63.21:0,63,857	0/0:24,0:24:63.18:0,63,813	0/0:20,0:20:54.18:0,54,734	0/0:34,0:34:96.32:0,96,1310	0/0:17,0:17:48.14:0,48,632	0/0:14,0:14:36.09:0,36,471	0/0:21,0:21:60.20:0,60,813	0/0:20,0:20:57.16:0,57,745	0/0:22,0:22:60.20:0,60,820	0/0:17,0:17:51.17:0,51,697	0/0:7,0:7:21.07:0,21,285
chr10	20384899	.	CACACCCACACACACAG	C	1958.72	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=2.747;DP=635;FS=25.056;HRun=0;HaplotypeScore=275.2158;InbreedingCoeff=0.6379;MQ=68.31;MQ0=12;MQRankSum=-4.986;QD=11.87;ReadPosRankSum=0.025;VQSLOD=1.1310;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:32,0:32:12.86:243,13,0	0/1:8,0:8:20.45:76,0,20	0/0:19,0:14:15.33:0,15,408	0/0:38,0:23:49.87:0,50,768	0/0:16,0:16:2.91:0,3,44	0/0:15,0:15:39.10:0,39,1025	0/0:27,0:26:37.65:0,38,1298	1/1:8,15:22:56.85:632,57,0	1/1:16,0:16:9.03:135,9,0	0/0:20,0:20:57.06:0,57,1202	0/0:23,0:23:42.02:0,42,995	0/0:23,0:23:51.02:0,51,1122	0/0:16,0:16:33.10:0,33,1074	0/0:24,0:23:45.04:0,45,1149	0/1:30,0:30:99:225,0,760	0/0:27,0:26:39.57:0,40,1108	0/0:38,0:38:85.23:0,85,3065	0/0:33,0:33:75.03:0,75,2678	0/0:24,0:21:63.13:0,63,1350	0/0:14,0:13:27.04:0,27,871	0/0:34,0:32:57.15:0,57,1809	0/0:30,0:30:44.98:0,45,1126	0/0:17,0:17:33.11:0,33,1065	0/0:32,0:31:66.47:0,66,1632	1/1:12,0:12:20:127,20,0	0/1:19,0:19:99:311,0,129	1/1:17,0:17:11.77:327,12,0	1/1:8,0:8:2.72:64,3,0
chr10	20384903	.	CCCACACACACAG	C	3470.55	PASS	AB=1.000;AC=18;AF=0.321;AN=56;BaseQRankSum=2.671;DP=634;FS=21.757;HRun=0;HaplotypeScore=227.1544;InbreedingCoeff=0.7880;MQ=64.23;MQ0=18;MQRankSum=-6.510;QD=19.39;ReadPosRankSum=-0.867;VQSLOD=1.2164;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:30:27.52:296,28,0	1/1:9,0:8:14.90:161,15,0	0/0:17,0:12:15.33:0,15,412	0/0:36,0:20:49.83:0,50,680	1/1:17,0:17:2.37:8,2,0	0/0:15,0:15:39.10:0,39,787	0/0:27,0:26:42.07:0,42,1025	1/1:20,0:19:56.79:540,57,0	1/1:1,15:16:9.03:351,9,0	0/0:20,0:20:57.02:0,57,1116	0/0:23,0:23:29.10:0,29,783	0/0:24,0:24:51.02:0,51,939	0/0:16,0:16:33.10:0,33,796	0/0:24,0:23:29.08:0,29,891	0/1:31,0:31:88.20:88,0,756	0/0:26,0:24:39.47:0,39,912	0/0:37,0:37:86.64:0,87,2340	0/0:33,0:33:74.95:0,75,2011	0/0:29,0:24:60.36:0,60,1217	0/0:13,0:12:27.03:0,27,650	0/0:36,0:33:57.15:0,57,1385	0/0:29,0:28:44.98:0,45,928	0/0:15,0:15:35.72:0,36,948	0/0:35,0:33:72.27:0,72,1405	1/1:9,1:10:21.04:341,21,0	0/1:22,0:20:63.79:669,0,64	1/1:16,1:17:48.05:790,48,0	1/1:7,0:7:17.62:226,18,0
chr10	20384907	.	CACACACAG	C	1862.49	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=6.235;DP=648;FS=6.706;HRun=0;HaplotypeScore=197.5898;InbreedingCoeff=0.8214;MQ=59.85;MQ0=19;MQRankSum=-6.914;QD=9.04;ReadPosRankSum=-0.200;VQSLOD=2.1137;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:40,0:40:11.67:80,12,0	1/1:6,3:8:11.83:117,12,0	0/0:15,0:10:11.14:0,11,149	0/0:33,0:17:17.67:0,18,169	1/1:19,2:21:2.07:9,2,0	0/0:15,0:14:15.12:0,15,209	0/0:26,0:25:25.77:0,26,339	1/1:21,0:20:6.56:158,7,0	1/1:16,0:16:9.01:182,9,0	0/0:21,0:21:24.07:0,24,433	0/0:23,0:23:28.84:0,29,276	0/0:23,0:23:35.28:0,35,293	0/0:16,0:16:29.99:0,30,284	0/0:22,0:21:13.69:0,14,264	0/1:30,0:30:75.11:75,0,281	0/0:24,0:22:27.50:0,28,264	0/0:37,0:37:74.60:0,75,782	0/0:35,0:35:65.83:0,66,681	0/0:28,0:23:58.12:0,58,524	0/0:13,0:12:21.02:0,21,205	0/0:37,0:34:50.08:0,50,465	0/0:27,0:26:32.97:0,33,299	0/0:15,0:15:28.78:0,29,349	0/0:32,0:30:44.95:0,45,465	1/1:8,4:12:14.11:271,14,0	1/1:19,6:23:7.73:467,8,0	1/1:19,4:23:33.50:521,33,0	1/1:7,2:9:12.77:181,13,0
chr10	20384913	.	CAG	C	1974.87	PASS	AB=0.844;AC=19;AF=0.339;AN=56;BaseQRankSum=0.600;DP=654;FS=6.934;HRun=0;HaplotypeScore=146.2688;InbreedingCoeff=0.7218;MQ=55.57;MQ0=23;MQRankSum=-5.921;QD=8.23;ReadPosRankSum=-6.823;VQSLOD=1.2116;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:44,0:44:21.55:318,22,0	1/1:9,0:8:9.77:64,10,0	0/0:15,0:8:11.14:0,11,149	0/0:32,0:12:9.33:0,9,141	0/1:3,21:24:10.84:11,0,11	0/0:14,0:13:5.48:0,5,117	0/0:29,0:28:6.97:0,7,142	1/1:18,0:17:35.51:287,36,0	1/1:15,1:16:8.88:78,9,0	0/1:26,0:25:67.64:68,0,194	0/0:19,0:19:14.79:0,15,148	0/0:20,0:20:33.61:0,34,211	0/0:16,0:16:23.96:0,24,114	0/0:23,0:22:8.12:0,8,122	0/0:31,0:31:21.64:0,22,245	0/0:22,0:20:23.84:0,24,130	0/0:37,0:37:64.08:0,64,314	0/0:35,0:35:57.83:0,58,287	0/1:29,0:23:2.65:3,0,293	0/0:14,0:13:18.17:0,18,92	0/0:38,0:35:46.04:0,46,297	0/0:26,0:24:28.80:0,29,182	0/0:16,0:16:30.98:0,31,181	0/0:27,0:25:37.31:0,37,200	1/1:16,0:16:32.98:281,33,0	1/1:26,0:24:52.90:486,53,0	1/1:23,1:24:53.39:428,53,0	1/1:8,0:8:17.62:152,18,0
chr10	20384925	.	CACACACACACACACAG	C	423.66	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.352;DP=684;FS=3.166;HRun=0;HaplotypeScore=260.8293;InbreedingCoeff=0.6035;MQ=53.00;MQ0=42;MQRankSum=-4.705;QD=15.69;ReadPosRankSum=1.934;VQSLOD=2.3232;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:47:54.07:0,54,1237	0/0:9,0:8:9.01:0,9,189	0/0:19,0:4:3.01:0,3,51	0/0:49,0:10:5.95:0,6,68	0/0:23,0:23:12.04:0,12,217	0/0:13,0:11:24.03:0,24,800	0/0:32,0:31:36.08:0,36,1022	0/0:25,0:23:44.68:0,45,612	0/0:16,0:16:4.08:0,4,141	0/0:26,0:24:51.05:0,51,977	0/0:18,0:18:18.06:0,18,626	0/0:15,0:15:11.81:0,12,521	0/0:17,0:17:26.96:0,27,996	0/0:24,0:23:30.10:0,30,946	1/1:11,16:27:15:512,15,0	0/0:21,0:19:18.53:0,19,676	0/0:35,0:35:61.19:0,61,2479	0/0:32,0:32:51.17:0,51,2130	0/0:35,0:28:50.41:0,50,1066	0/0:14,0:13:17.95:0,18,669	0/0:39,0:35:33.08:0,33,1182	0/0:24,0:22:24.08:0,24,802	0/0:16,0:16:23.90:0,24,733	0/0:29,0:27:45.63:0,46,1455	0/0:16,0:16:33.10:0,33,660	0/0:28,0:26:66.07:0,66,1141	0/0:26,0:26:17.80:0,18,1153	0/0:8,0:8:24.02:0,24,493
chr10	20384927	.	C	CACAG	387.42	PASS	AB=0.950;AC=5;AF=0.089;AN=56;BaseQRankSum=4.045;DP=691;FS=19.288;HRun=0;HaplotypeScore=168.4812;InbreedingCoeff=-0.1072;MQ=52.85;MQ0=43;MQRankSum=-4.000;QD=4.40;ReadPosRankSum=-0.509;VQSLOD=1.5690;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:39,8:49:43.98:0,44,362	0/1:6,3:8:57.13:58,0,57	0/0:19,0:5:9:0,9,95	0/0:49,0:8:9.36:0,9,107	0/0:21,1:22:9.10:0,9,81	0/0:11,0:9:23.96:0,24,245	0/0:32,0:31:39.25:0,39,349	0/0:28,0:26:32.04:0,32,263	0/0:15,0:15:14.68:0,15,136	0/0:26,0:23:34.10:0,34,393	0/0:19,0:19:26.95:0,27,243	0/0:15,0:15:15.50:0,15,155	0/0:17,0:17:27:0,27,269	0/0:24,0:23:32.98:0,33,310	0/0:27,0:27:20.94:0,21,184	0/0:21,0:19:20.78:0,21,219	0/0:35,0:35:66.59:0,67,685	0/0:34,0:34:57.07:0,57,583	0/0:35,0:28:60.45:0,60,478	0/0:14,0:13:17.78:0,18,173	0/0:39,0:35:33.52:0,34,339	0/0:25,0:23:26.91:0,27,259	0/0:15,0:15:29.41:0,29,280	0/0:31,0:29:56.84:0,57,532	0/1:16,0:16:86.47:86,0,162	0/1:29,0:27:99:247,0,273	0/1:26,0:26:91.32:91,0,399	0/1:8,0:8:20.88:21,0,121
chr10	20385388	.	CATGCCT	C	7714.02	PASS	AB=0.575;AC=44;AF=0.786;AN=56;BaseQRankSum=1.268;DP=557;FS=5.627;HRun=0;HaplotypeScore=177.1288;InbreedingCoeff=0.5627;MQ=73.05;MQ0=2;MQRankSum=-7.145;QD=16.84;ReadPosRankSum=6.086;VQSLOD=3.5383;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,28:33:2.37:9,2,0	1/1:3,5:8:9.03:202,9,0	0/0:33,0:25:60.15:0,60,1527	0/0:38,0:29:71.54:0,72,1873	0/1:4,12:16:0.19:1,0,0	1/1:2,16:18:5.90:120,6,0	1/1:4,24:28:5.85:136,6,0	1/1:3,13:16:39.13:890,39,0	1/1:10,14:24:23.60:537,24,0	1/1:6,16:22:51.17:1127,51,0	0/1:3,8:11:0.08:1,0,0	1/1:5,17:22:8.70:186,9,0	1/1:3,12:15:6.02:137,6,0	1/1:2,13:15:1.89:67,2,0	1/1:6,20:26:9.03:201,9,0	1/1:15,5:20:33.08:610,33,0	1/1:8,20:28:15.04:303,15,0	1/1:7,15:22:33.08:648,33,0	1/1:9,7:16:24.08:539,24,0	0/0:2,7:9:2.75:0,3,78	1/1:17,27:44:3.01:50,3,0	0/0:3,8:11:0.69:0,1,2	0/0:0,7:7:0.47:0,0,1	1/1:10,20:30:11.96:197,12,0	1/1:4,7:11:3.01:46,3,0	1/1:8,9:17:42.14:950,42,0	1/1:3,9:12:24.08:487,24,0	1/1:2,2:4:12.04:270,12,0
chr10	20385393	.	CTA	C	2424.17	PASS	AB=0.950;AC=43;AF=0.768;AN=56;BaseQRankSum=8.184;DP=519;FS=6.825;HRun=0;HaplotypeScore=166.7208;InbreedingCoeff=0.5690;MQ=67.92;MQ0=4;MQRankSum=-6.908;QD=5.88;ReadPosRankSum=6.228;VQSLOD=2.2910;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:30,2:32:0:0,0,0	1/1:5,3:8:8.91:71,9,0	0/0:33,0:20:56.51:0,57,991	0/0:41,0:28:78.21:0,78,1360	0/0:12,4:16:0:0,0,0	1/1:16,2:18:5.65:29,6,0	1/1:25,1:26:5.58:36,6,0	1/1:15,0:15:37.67:205,38,0	1/1:17,6:23:23.87:197,24,0	1/1:19,0:19:49.40:311,49,0	0/0:8,0:8:0:0,0,0	1/1:18,3:22:8.66:80,9,0	1/1:14,0:14:5.88:36,6,0	1/1:14,1:15:2.64:18,3,0	1/1:21,4:25:9:78,9,0	1/1:7,12:19:32.21:266,32,0	1/1:22,2:24:12.26:116,12,0	1/1:16,3:19:32.36:241,32,0	1/1:12,1:13:23.41:176,23,0	0/0:9,0:9:3.01:0,3,58	1/1:36,1:37:3.01:46,3,0	0/1:9,1:10:0.01:0,0,0	0/1:7,0:7:0:0,0,0	1/1:22,5:27:6.43:133,6,0	1/1:7,1:8:2.37:8,2,0	1/1:9,6:15:41.21:299,41,0	1/1:9,2:12:20.10:119,20,0	1/1:2,2:4:11.86:90,12,0
chr10	20385397	.	GCCTGCACACACACACACACACACACACACA	G	5397.30	PASS	AB=0.971;AC=29;AF=0.518;AN=56;BaseQRankSum=3.982;DP=520;FS=20.784;HRun=0;HaplotypeScore=296.5495;InbreedingCoeff=0.1948;MQ=61.99;MQ0=5;MQRankSum=-5.777;QD=16.61;ReadPosRankSum=3.957;VQSLOD=1.6704;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:30,1:31:2.68:164,3,0	1/1:5,3:8:9.01:471,9,0	0/0:30,0:17:48.08:0,48,1132	0/0:37,0:24:72.22:0,72,1938	1/1:12,4:16:0.47:2,0,0	1/1:19,0:19:4.74:29,5,0	1/1:29,0:29:3.23:42,3,0	0/1:14,0:14:99:163,0,454	1/1:15,1:20:23.68:914,24,0	0/1:19,0:19:99:128,0,2396	0/1:10,0:10:0:1,0,0	0/1:24,0:24:11.57:12,0,841	0/1:14,0:14:11.24:11,0,675	0/0:16,0:16:4.37:0,4,215	1/1:20,0:24:9.03:433,9,0	0/0:23,0:23:16.51:0,17,3328	0/1:26,0:26:21.40:21,0,1351	0/1:19,0:19:57.70:58,0,1604	0/1:10,0:10:60.84:61,0,1583	0/0:8,0:8:2.64:0,3,324	0/0:33,0:33:6.02:0,6,668	0/0:13,0:13:4.95:0,5,376	0/0:9,0:9:0.47:0,0,1	0/0:26,0:26:14.49:0,14,1634	1/1:7,1:8:3.01:202,3,0	0/1:11,6:17:3.58:1480,0,4	1/1:9,3:12:23.97:729,24,0	1/1:2,1:4:12:476,12,0
chr10	20385398	.	CCT	C	1054.49	PASS	AB=0.989;AC=33;AF=0.611;AN=54;BaseQRankSum=7.525;DP=542;FS=18.237;HRun=0;HaplotypeScore=177.2068;InbreedingCoeff=0.0083;MQ=61.65;MQ0=5;MQRankSum=-3.804;QD=2.48;ReadPosRankSum=4.913;VQSLOD=1.3540;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	1/1:8,0:8:7.65:29,8,0	0/0:30,0:17:48.08:0,48,864	0/0:37,0:24:69.86:0,70,1167	0/1:16,0:16:0.10:0,0,0	1/1:19,0:19:2.27:9,2,0	1/1:30,0:30:0.60:11,1,0	0/1:15,0:15:55.79:58,0,56	1/1:20,0:20:20.44:89,20,0	0/1:20,0:20:46.43:119,0,46	0/1:10,0:10:0:0,0,0	1/1:25,2:27:13.82:94,14,0	0/1:18,0:18:34.08:93,0,34	0/1:17,0:17:2.35:2,0,41	1/1:24,0:24:7.77:30,8,0	0/1:25,0:25:13.09:119,0,13	0/1:29,0:29:71.65:72,0,101	0/1:18,1:19:9.75:74,0,10	0/1:9,1:10:84.49:84,0,94	0/0:8,0:8:2.85:0,3,21	1/1:34,0:34:4.21:24,4,0	0/1:15,0:15:24.17:24,0,25	0/0:9,0:9:0.47:0,0,1	1/1:29,0:29:6.13:100,6,0	0/1:8,0:8:0:0,0,0	0/1:17,0:17:20.29:83,0,20	1/1:12,0:12:14.36:51,14,0	1/1:4,0:4:10.02:37,10,0
chr10	20385594	.	A	AATAC	6560.08	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=3.113;DP=807;FS=8.627;HRun=0;HaplotypeScore=129.1081;InbreedingCoeff=1.0000;MQ=85.93;MQ0=0;MQRankSum=-6.185;QD=60.18;ReadPosRankSum=-0.254;VQSLOD=6.3703;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,102,1742	0/0:18,0:18:54.18:0,54,965	0/0:26,0:26:68.04:0,68,1190	0/0:30,0:30:66.23:0,66,1169	0/0:32,0:32:93.32:0,93,1691	0/0:27,0:27:69.22:0,69,1215	0/0:27,0:27:72.23:0,72,1279	1/1:15,16:34:69.21:1584,69,0	1/1:1,35:38:99:2590,99,0	0/0:36,0:36:99:0,99,1799	0/0:22,0:22:54.19:0,54,981	0/0:40,0:40:99:0,102,1795	0/0:25,0:25:66.23:0,66,1193	0/0:36,0:36:96.33:0,96,1739	1/1:5,32:37:93.32:2387,93,0	0/0:32,0:32:96.33:0,96,1718	0/0:24,0:24:69.22:0,69,1223	0/0:21,0:21:51.17:0,51,928	0/0:20,0:19:51.17:0,51,880	0/0:27,0:27:75.24:0,75,1329	0/0:41,0:41:99:0,117,2077	0/0:33,0:33:96.33:0,96,1745	0/0:19,0:19:51.16:0,51,896	0/0:25,0:25:72.16:0,72,1234	0/0:30,0:30:81.28:0,81,1473	0/0:34,0:34:93.32:0,93,1691	0/0:21,0:21:63.18:0,63,1102	0/0:16,0:16:48.13:0,48,796
chr10	20386324	.	AAG	A	926.47	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.728;DP=722;FS=0.771;HRun=0;HaplotypeScore=105.9489;InbreedingCoeff=0.9907;MQ=86.25;MQ0=1;MQRankSum=-2.422;QD=29.89;ReadPosRankSum=1.727;VQSLOD=4.9446;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,144,2600	0/0:8,0:8:17.99:0,18,288	0/0:24,0:23:66.21:0,66,1139	0/0:30,0:30:73.18:0,73,1176	0/0:15,0:15:42.14:0,42,786	0/0:18,0:18:51.16:0,51,913	0/0:31,0:31:93.24:0,93,1607	0/0:33,0:33:90.30:0,90,1615	0/0:25,0:25:72.25:0,72,1327	0/0:21,0:21:59.94:0,60,1116	0/0:12,0:12:36.12:0,36,666	0/0:30,0:30:87.28:0,87,1598	0/0:26,0:26:75.24:0,75,1351	0/0:29,0:29:87.28:0,87,1589	1/1:2,29:31:72.20:1021,72,0	0/0:24,0:24:72.25:0,72,1313	0/0:54,0:54:99:0,163,2996	0/0:30,0:30:90.29:0,90,1598	0/0:15,0:15:45.15:0,45,818	0/0:17,0:17:51.16:0,51,908	0/0:35,0:35:99:0,102,1844	0/0:18,0:18:54.18:0,54,996	0/0:16,0:16:48.16:0,48,882	0/0:49,0:48:99:0,141,2550	0/0:15,0:15:42.14:0,42,771	0/0:37,0:37:99:0,108,2013	0/0:21,0:21:60.21:0,60,1101	0/0:9,0:9:27.09:0,27,489
chr10	20386431	.	AT	A	1511.70	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=10.178;DP=600;FS=15.636;HRun=8;HaplotypeScore=62.9378;InbreedingCoeff=0.9802;MQ=79.73;MQ0=0;MQRankSum=-0.250;QD=22.90;ReadPosRankSum=0.513;VQSLOD=2.7086;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,108,1283	0/0:13,0:13:36.11:0,36,435	0/0:15,0:15:42.11:0,42,486	0/0:16,0:15:39.05:0,39,426	0/0:14,1:15:13.15:0,13,442	0/0:18,0:18:45:0,45,521	0/0:40,0:40:99:0,102,1196	1/1:3,18:21:54.06:514,54,0	1/1:1,21:22:38.27:503,38,0	0/0:18,0:18:48.15:0,48,580	0/0:11,0:11:27.08:0,27,326	0/0:31,0:31:75.22:0,75,896	0/0:24,0:24:66.18:0,66,775	0/0:23,0:23:66.17:0,66,772	1/1:1,22:23:66.10:637,66,0	0/0:18,0:18:45.12:0,45,522	0/0:36,0:36:87.27:0,87,1051	0/0:21,0:21:57.17:0,57,689	0/0:21,0:21:60.17:0,60,712	0/0:18,0:18:48.15:0,48,580	0/0:28,0:28:81.25:0,81,978	0/0:17,0:17:48.15:0,48,580	0/0:21,0:20:60.18:0,60,724	0/0:34,0:34:99:0,99,1183	0/0:15,0:15:42.13:0,42,503	0/0:23,0:23:66.19:0,66,787	0/0:15,0:15:42.13:0,42,507	0/0:5,0:5:12.04:0,12,145
chr10	20386931	.	CTTCT	C	4586.52	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=15.130;DP=845;FS=2.937;HRun=0;HaplotypeScore=156.8780;InbreedingCoeff=1.0000;MQ=64.89;MQ0=0;MQRankSum=-11.259;QD=44.10;ReadPosRankSum=-2.218;VQSLOD=5.0038;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,117,2936	0/0:17,0:17:51.14:0,51,1274	0/0:34,0:34:97.05:0,97,2147	0/0:24,0:24:65.17:0,65,1292	0/0:23,0:23:69.17:0,69,1619	0/0:24,0:24:72.17:0,72,1902	0/0:30,0:30:90.15:0,90,2099	1/1:0,33:33:83.51:1132,84,0	1/1:5,27:32:89.64:1457,90,0	0/0:39,0:39:99:0,117,3002	0/0:15,0:15:45.14:0,45,1192	0/0:41,0:41:99:0,123,3002	0/0:40,0:40:99:0,120,3249	0/0:33,0:33:99:0,99,2565	1/1:0,39:39:99:1998,99,0	0/0:35,0:35:99:0,105,2804	0/0:38,0:38:99:0,114,2817	0/0:25,0:24:44.10:0,44,1888	0/0:26,0:26:78.21:0,78,1930	0/0:25,0:25:75.23:0,75,1961	0/0:37,0:37:99:0,111,2709	0/0:29,0:29:87.24:0,87,2181	0/0:18,0:18:51.14:0,51,1253	0/0:39,0:39:99:0,117,2951	0/0:22,0:22:66.17:0,66,1601	0/0:37,0:37:99:0,111,2977	0/0:32,0:32:96.25:0,96,2421	0/0:18,0:18:53.99:0,54,1292
chr10	20386972	.	GT	G	470.71	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=9.232;DP=848;FS=1.452;HRun=1;HaplotypeScore=116.5493;InbreedingCoeff=0.9999;MQ=66.06;MQ0=0;MQRankSum=-9.358;QD=13.08;ReadPosRankSum=2.340;VQSLOD=2.9014;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,111,1771	0/0:16,0:16:48.14:0,48,730	0/0:27,0:26:78.26:0,78,1226	0/0:19,0:19:52.31:0,52,741	0/0:21,0:20:60.16:0,60,890	0/0:18,0:18:54.18:0,54,854	0/0:30,0:30:90.31:0,90,1434	0/0:42,0:42:99:0,120,1885	1/1:5,30:36:88.50:566,88,0	0/0:43,0:43:99:0,129,2041	0/0:25,0:25:69.23:0,69,1088	0/0:41,0:41:99:0,123,1941	0/0:38,0:38:99:0,114,1808	0/0:35,0:35:99:0,102,1579	0/0:38,0:38:96.33:0,96,1528	0/0:33,0:33:99:0,99,1578	0/0:38,0:37:99:0,105,1618	0/0:22,0:21:63.21:0,63,1006	0/0:21,0:21:60.20:0,60,954	0/0:28,0:28:84.29:0,84,1339	0/0:35,0:35:99:0,102,1608	0/0:23,0:23:63.20:0,63,984	0/0:23,0:23:69.19:0,69,1053	0/0:40,0:41:99:0,120,1882	0/0:25,0:25:75.22:0,75,1130	0/0:44,0:44:99:0,129,2020	0/0:37,0:37:99:0,111,1750	0/0:12,0:12:36.11:0,36,551
chr10	20386974	.	CTTT	C	886.08	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=9.114;DP=857;FS=0.000;HRun=3;HaplotypeScore=147.8210;InbreedingCoeff=0.9998;MQ=65.63;MQ0=0;MQRankSum=-8.833;QD=23.32;ReadPosRankSum=2.182;VQSLOD=0.8355;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,117,2733	0/0:15,0:15:42.14:0,42,1014	0/0:26,0:25:75.26:0,75,1805	0/0:21,0:21:57.66:0,58,1265	0/0:21,0:20:60.21:0,60,1413	0/0:17,0:17:51.15:0,51,1159	0/0:32,0:32:93.32:0,93,2135	0/0:41,0:41:99:0,123,2895	1/1:8,30:38:79.77:981,80,0	0/0:42,0:42:99:0,126,2998	0/0:25,0:25:72.18:0,72,1610	0/0:41,0:41:99:0,123,2999	0/0:40,0:40:99:0,120,2826	0/0:34,0:34:99:0,99,2375	0/0:38,0:38:99:0,102,2402	0/0:33,0:33:99:0,99,2345	0/0:39,0:38:99:0,114,2600	0/0:24,0:23:72.21:0,72,1580	0/0:22,0:22:66.22:0,66,1511	0/0:29,0:29:87.30:0,87,2090	0/0:36,0:36:99:0,108,2603	0/0:21,0:21:63.17:0,63,1464	0/0:24,0:24:72.25:0,72,1719	0/0:42,0:42:99:0,126,2873	0/0:25,0:25:75.24:0,75,1737	0/0:44,0:44:99:0,129,3050	0/0:36,0:36:99:0,108,2623	0/0:12,0:12:36.12:0,36,875
chr10	20387869	.	T	TA	1103.76	PASS	AB=0.933;AC=8;AF=0.143;AN=56;BaseQRankSum=-3.709;DP=551;FS=2.588;HRun=11;HaplotypeScore=95.7220;InbreedingCoeff=0.6154;MQ=73.67;MQ0=1;MQRankSum=0.976;QD=11.74;ReadPosRankSum=-2.083;VQSLOD=3.1064;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:33:91.67:0,92,700	0/0:17,0:17:38.81:0,39,297	0/1:19,0:16:2.15:2,0,80	0/0:10,0:9:1.90:0,2,18	0/0:31,0:35:66.76:0,67,494	0/0:17,0:18:49.84:0,50,374	0/0:24,0:24:37.31:0,37,458	1/1:7,10:17:3.78:206,4,0	1/1:2,18:20:54.11:548,54,0	0/0:21,0:23:40.85:0,41,308	0/0:24,0:25:64.46:0,64,493	0/0:10,0:10:29.87:0,30,229	0/1:11,2:13:31:31,0,156	0/0:9,1:12:3.52:0,4,190	1/1:7,18:25:45.09:456,45,0	0/0:15,0:15:38.83:0,39,302	0/0:19,0:20:43.84:0,44,327	0/0:22,0:22:59.74:0,60,464	0/0:22,0:25:59.85:0,60,431	0/0:16,0:16:31.42:0,31,253	0/0:9,0:9:17.91:0,18,139	0/0:20,0:20:50.80:0,51,395	0/0:23,0:24:58.79:0,59,447	0/0:11,0:11:32.87:0,33,255	0/0:20,0:20:47.77:0,48,371	0/0:23,1:26:33.29:0,33,421	0/0:34,0:34:86.61:0,87,667	0/0:8,0:8:14.94:0,15,116
chr10	20389774	.	T	TCACACA	4981.88	PASS	AB=0.799;AC=44;AF=0.815;AN=54;BaseQRankSum=5.733;DP=596;FS=8.501;HRun=0;HaplotypeScore=195.9814;InbreedingCoeff=0.4470;MQ=73.03;MQ0=9;MQRankSum=-6.702;QD=9.88;ReadPosRankSum=-1.359;VQSLOD=2.3238;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:31,0:28:8.96:137,9,0	1/1:12,0:12:17.17:261,17,0	0/0:38,0:30:51.14:0,51,985	0/0:44,0:36:54.10:0,54,993	0/1:14,0:18:0.05:0,0,0	1/1:18,0:19:11.99:192,12,0	1/1:22,0:22:6.02:122,6,0	1/1:36,0:35:55.23:784,55,0	1/1:27,0:27:15.94:202,16,0	1/1:19,0:27:38.57:705,39,0	1/1:12,0:12:2.99:24,3,0	1/1:16,9:26:12.04:309,12,0	1/1:19,7:26:7.74:106,8,0	0/1:13,7:21:0:0,0,0	1/1:22,0:21:3.01:51,3,0	0/1:8,11:17:0:0,0,0	1/1:12,5:16:8.99:112,9,0	0/1:7,1:8:20.49:245,0,20	1/1:22,0:21:23.92:323,24,0	1/1:12,0:11:3.95:46,4,0	1/1:16,0:16:3.01:49,3,0	./.	1/1:13,0:14:3.47:72,3,0	0/1:19,0:19:0:0,0,0	0/1:10,0:16:0.05:0,0,0	1/1:23,1:25:51.08:978,51,0	1/1:22,0:29:15.04:211,15,0	1/1:5,0:3:3.01:54,3,0
chr10	20389909	.	AAC	A	4526.19	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=10.864;DP=937;FS=13.010;HRun=0;HaplotypeScore=150.1990;InbreedingCoeff=0.9519;MQ=55.65;MQ0=13;MQRankSum=4.415;QD=23.09;ReadPosRankSum=4.518;VQSLOD=5.0852;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,37:47:69.58:843,70,0	1/1:1,12:13:24.07:306,24,0	0/0:64,1:41:45.73:0,46,1228	0/0:45,0:36:57.17:0,57,850	1/1:5,26:31:66.09:803,66,0	0/0:31,1:32:37.06:0,37,1122	0/0:26,0:26:38.79:0,39,717	0/0:48,0:47:99:0,108,1650	0/0:36,0:35:75.25:0,75,1209	0/0:31,0:31:80.99:0,81,1238	0/0:22,0:22:51.13:0,51,792	0/0:32,0:32:84.09:0,84,1278	0/0:34,0:33:37.33:0,37,1088	0/0:26,0:26:51.17:0,51,785	0/0:42,0:42:73.11:0,73,1492	0/0:30,0:30:81.27:0,81,1291	0/0:22,0:22:39.81:0,40,565	0/0:22,0:22:39.67:0,40,830	0/0:24,0:23:48.12:0,48,742	0/0:27,0:27:75.24:0,75,1201	0/0:72,1:72:99:0,139,2771	0/0:23,0:23:57.18:0,57,899	0/0:31,1:32:40.08:0,40,1189	0/0:49,0:49:96.33:0,96,1588	1/1:2,31:32:63.12:765,63,0	1/1:7,33:39:74.82:1142,75,0	1/1:4,18:22:36.12:458,36,0	1/1:2,8:10:0.21:208,0,0
chr10	20390855	.	GC	G	1440.29	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=2.796;DP=683;FS=9.581;HRun=3;HaplotypeScore=79.6723;InbreedingCoeff=0.9835;MQ=78.60;MQ0=0;MQRankSum=-1.063;QD=30.01;ReadPosRankSum=1.776;VQSLOD=2.8592;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,105,1469	0/0:12,0:12:30.10:0,30,430	0/0:17,0:17:36.11:0,36,480	0/0:17,0:17:41.89:0,42,498	0/0:20,0:20:57.15:0,57,780	0/0:21,0:21:63.21:0,63,907	0/0:42,0:42:99:0,120,1708	0/0:19,0:19:57.18:0,57,803	1/1:1,25:26:69.22:855,69,0	0/0:22,0:22:63.20:0,63,891	0/0:12,0:12:36.12:0,36,517	0/0:23,0:23:63.18:0,63,856	0/0:23,0:23:69.21:0,69,974	0/0:27,0:27:72.22:0,72,1018	1/1:3,19:22:57.18:707,57,0	0/0:25,0:25:72.24:0,72,1037	0/0:36,0:36:99:0,105,1467	0/0:28,0:28:81.24:0,81,1127	0/0:26,0:26:78.21:0,78,1052	0/0:21,0:21:63.21:0,63,907	0/0:29,0:29:81.24:0,81,1129	0/0:29,0:29:87.26:0,87,1198	0/0:10,0:10:27.09:0,27,383	0/0:47,0:47:99:0,141,2026	0/0:25,0:25:72.24:0,72,1037	0/0:33,0:33:93.30:0,93,1321	0/0:31,0:31:93.31:0,93,1339	0/0:4,0:4:12.04:0,12,173
chr10	20391739	.	GCACACACACACACA	G	1278.40	PASS	AB=0.963;AC=14;AF=0.389;AN=36;BaseQRankSum=2.931;DP=543;FS=4.738;HRun=0;HaplotypeScore=168.4032;InbreedingCoeff=0.3354;MQ=59.12;MQ0=44;MQRankSum=-0.613;QD=8.14;ReadPosRankSum=1.142;VQSLOD=2.6535;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	./.	0/1:21,0:17:25.13:55,0,25	./.	0/0:20,0:20:3.59:0,4,10	0/0:14,0:12:12.04:0,12,563	0/0:16,0:16:0.89:0,1,2	./.	1/1:17,1:17:3.01:115,3,0	1/1:11,0:11:5.38:51,5,0	1/1:17,1:22:9.03:311,9,0	0/0:11,0:11:9.03:0,9,213	1/1:18,0:19:9.03:320,9,0	1/1:21,0:20:1.29:65,1,0	0/0:17,0:16:0.47:0,0,1	0/0:13,0:13:3.01:0,3,77	./.	0/0:30,0:26:6.02:0,6,106	0/0:11,0:11:0.47:0,0,1	./.	0/0:33,1:32:0:0,0,0	0/0:17,0:16:0.47:0,0,1	0/1:23,0:24:99:185,0,138	1/1:16,0:17:8.13:291,8,0	./.
chr10	20392804	.	GGA	G	868.33	PASS	AB=0.983;AC=36;AF=0.692;AN=52;BaseQRankSum=1.384;DP=495;FS=2.532;HRun=0;HaplotypeScore=80.0056;InbreedingCoeff=0.1559;MQ=56.95;MQ0=18;MQRankSum=1.463;QD=2.27;ReadPosRankSum=0.672;VQSLOD=1.8250;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:27,3:27:12.76:172,13,0	1/1:5,0:5:2.80:13,3,0	./.	./.	1/1:17,3:20:3.01:33,3,0	1/1:11,5:16:8.86:84,9,0	0/1:24,1:25:12.94:13,0,40	0/0:23,0:21:0.46:0,0,1	0/1:16,0:14:0.01:0,0,0	0/1:17,0:17:2.75:49,0,3	0/1:21,0:21:5.57:57,0,6	1/1:9,0:9:2.36:37,2,0	0/0:17,0:16:5.70:0,6,28	0/1:19,0:18:1.36:28,0,1	1/1:18,0:18:0.89:2,1,0	0/1:18,1:18:0:0,0,0	1/1:14,2:15:4.18:44,4,0	1/1:9,2:10:6.02:66,6,0	0/0:16,0:16:3.56:0,4,13	1/1:18,0:18:6.02:66,6,0	1/1:15,2:15:12.03:128,12,0	0/1:12,0:12:0:0,0,0	1/1:10,3:11:8.97:76,9,0	0/1:22,1:21:0:0,0,0	0/1:13,0:13:6.05:8,0,6	0/1:16,0:16:7.72:27,0,8	1/1:13,1:14:8.84:71,9,0	1/1:10,0:9:1.98:9,2,0
chr10	20392832	.	AGAGAGAGAGAGG	A	416.96	PASS	AB=1.000;AC=10;AF=0.185;AN=54;BaseQRankSum=2.026;DP=384;FS=0.000;HRun=0;HaplotypeScore=125.1730;InbreedingCoeff=-0.0710;MQ=40.45;MQ0=28;MQRankSum=-3.796;QD=3.02;ReadPosRankSum=-1.211;VQSLOD=2.2794;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:23:28.49:0,28,596	0/0:3,0:3:5.96:0,6,44	./.	0/0:10,0:5:8.57:0,9,48	0/0:17,0:17:5.04:0,5,148	0/0:18,0:17:26.96:0,27,252	0/1:18,0:16:38.80:39,0,344	0/1:18,0:14:99:126,0,120	0/1:19,0:17:42.74:43,0,193	0/1:18,0:17:16.55:17,0,158	0/0:15,0:15:12.04:0,12,158	0/1:12,0:12:48.80:71,0,49	1/1:6,7:12:6.02:114,6,0	0/0:9,0:8:9.03:0,9,125	0/1:16,0:15:51.76:76,0,52	0/0:13,0:11:7.35:0,7,53	0/1:10,0:9:0.43:0,0,152	0/0:6,0:5:9.01:0,9,152	0/1:14,0:12:66.90:67,0,177	0/0:15,0:14:11.74:0,12,137	0/0:19,0:16:14.11:0,14,124	0/0:12,0:12:5.90:0,6,70	0/0:12,0:10:15.21:0,15,143	0/0:16,0:11:7.53:0,8,49	0/0:8,0:8:8.68:0,9,57	0/0:16,0:15:30.20:0,30,341	0/0:12,0:10:23.70:0,24,318	0/0:10,0:7:14.79:0,15,121
chr10	20392838	.	AGAGAGG	A	1831.65	PASS	AB=0.923;AC=32;AF=0.593;AN=54;BaseQRankSum=-2.186;DP=347;FS=0.000;HRun=0;HaplotypeScore=90.5919;InbreedingCoeff=0.1151;MQ=38.55;MQ0=29;MQRankSum=0.125;QD=6.25;ReadPosRankSum=0.270;VQSLOD=1.7302;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:22:32.71:33,0,94	0/0:1,0:1:2.60:0,3,10	./.	0/0:7,0:2:5.82:0,6,36	0/0:14,0:14:2.75:0,3,41	1/1:14,0:13:13.77:166,14,0	0/1:15,0:13:89.29:99,0,89	1/1:17,0:13:23.37:160,23,0	0/1:19,0:16:3.65:4,0,109	1/1:4,11:13:4.76:210,5,0	0/1:5,6:11:5.56:97,0,6	1/1:13,0:13:11.61:106,12,0	1/1:10,0:9:0.64:11,1,0	0/1:2,5:7:1.35:48,0,1	0/1:17,0:16:26.69:27,0,36	1/1:11,0:9:2.09:24,2,0	0/1:9,0:8:4.23:167,0,4	1/1:7,0:6:11.59:97,12,0	1/1:15,0:13:20.76:143,21,0	1/1:4,11:14:5.95:107,6,0	1/1:20,0:16:12.51:232,13,0	0/1:10,0:10:0:1,0,0	1/1:12,0:10:8.29:198,8,0	0/0:13,1:9:0.27:0,0,1	0/0:6,0:6:4.95:0,5,19	0/1:18,0:17:14.18:14,0,131	0/1:11,0:9:38.99:39,0,60	0/0:8,0:5:8.83:0,9,61
chr10	20392843	.	GGGAGGGAGGGAA	G	741.43	PASS	AB=0.982;AC=25;AF=0.463;AN=54;BaseQRankSum=-1.165;DP=317;FS=10.608;HRun=0;HaplotypeScore=107.3277;InbreedingCoeff=-0.1961;MQ=36.61;MQ0=34;MQRankSum=3.106;QD=3.12;ReadPosRankSum=3.302;VQSLOD=1.3924;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:17:2.09:0,2,264	1/1:1,0:1:1.25:3,1,0	./.	0/0:7,0:2:6.02:0,6,132	0/0:8,0:8:4.14:0,4,75	0/1:12,0:11:18.35:18,0,38	0/1:16,0:13:47.65:48,0,138	0/1:18,0:11:4.63:5,0,62	0/1:18,0:15:7.20:7,0,417	0/1:15,0:13:66.83:128,0,67	0/0:10,0:10:6.59:0,7,29	0/1:13,0:12:44.64:117,0,45	1/1:10,0:8:3.01:38,3,0	0/0:6,0:6:4.82:0,5,31	0/1:17,0:16:31.31:31,0,229	0/1:11,0:9:63.40:63,0,135	0/1:7,0:6:25.55:26,0,63	0/1:8,0:7:0.67:1,0,127	0/1:12,0:10:4.45:4,0,228	0/0:13,0:12:3.57:0,4,11	1/1:17,0:14:10.47:147,10,0	0/1:7,0:7:0:0,0,0	0/0:9,0:7:15.17:0,15,105	1/1:14,0:9:1.61:13,2,0	1/1:5,0:5:2.59:10,3,0	0/1:12,7:18:99:197,0,439	0/1:11,0:9:24.10:24,0,305	0/1:7,0:4:0.52:1,0,207
chr10	20392851	.	GGGAA	G	800.47	PASS	AB=0.992;AC=24;AF=0.444;AN=54;BaseQRankSum=-1.747;DP=346;FS=9.014;HRun=0;HaplotypeScore=95.2878;InbreedingCoeff=-0.1424;MQ=35.35;MQ0=34;MQRankSum=3.541;QD=3.32;ReadPosRankSum=3.272;VQSLOD=0.9014;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:18:5.58:0,6,197	1/1:2,0:2:3.48:42,3,0	./.	0/0:7,0:2:6.02:0,6,71	0/0:10,0:10:9.22:0,9,65	0/1:11,0:10:12.06:21,0,12	0/1:19,0:16:62.03:62,0,65	0/1:19,0:12:17.47:22,0,17	0/0:18,0:15:12.81:0,13,256	0/1:18,0:16:7.43:165,0,7	0/0:5,0:5:0:0,0,0	0/1:13,0:12:23.58:73,0,24	0/1:11,0:9:0.02:0,0,0	0/1:7,0:7:0.06:0,0,0	0/0:18,0:17:7.01:0,7,143	0/1:12,0:10:33.70:34,0,49	1/1:7,0:6:14.10:86,14,0	0/1:7,1:7:4.21:4,0,50	0/1:14,0:11:17.19:59,0,17	0/0:13,0:12:2.04:0,2,6	1/1:18,0:14:0.07:120,0,0	0/0:8,0:8:0.89:0,1,2	0/1:9,0:8:7.83:8,0,26	1/1:12,13:20:0.90:28,1,0	1/1:5,0:5:2.88:15,3,0	0/1:21,0:19:99:115,0,223	0/1:14,0:13:54.89:55,0,86	0/1:7,0:4:30.88:31,0,79
chr10	20393628	.	G	GGTTTGTTT	21096.93	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-9.731;DP=838;FS=3.587;HRun=0;HaplotypeScore=197.6391;InbreedingCoeff=0.9231;MQ=65.30;MQ0=5;MQRankSum=-3.465;QD=30.75;ReadPosRankSum=-0.222;VQSLOD=4.5223;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:44:77.85:666,78,0	1/1:3,0:12:23.94:196,24,0	0/0:29,0:28:11.98:0,12,162	0/0:33,0:32:14.35:0,14,132	1/1:11,0:35:62.86:576,63,0	1/1:5,12:23:24.06:885,24,0	1/1:18,6:33:15.05:531,15,0	0/0:20,0:31:10.06:0,10,156	0/0:9,0:26:45.15:0,45,809	1/1:21,9:39:50.38:1299,50,0	1/1:9,14:26:45.11:1589,45,0	1/1:16,14:35:39.13:1587,39,0	1/1:9,25:39:66.23:2658,66,0	1/1:9,12:28:42.14:1716,42,0	0/0:9,0:30:54.19:0,54,1006	1/1:23,12:47:21.07:861,21,0	1/1:13,10:27:21.07:861,21,0	1/1:10,3:19:15.03:392,15,0	1/1:21,3:27:27.69:690,28,0	1/1:12,13:28:45.12:1402,45,0	1/1:19,6:30:6:147,6,0	1/1:8,17:29:51.09:1797,51,0	1/1:9,9:24:27.98:1076,28,0	1/1:24,11:39:24.08:983,24,0	1/1:10,0:25:35.92:294,36,0	1/1:16,0:37:8.03:539,8,0	1/1:9,0:28:29.17:231,29,0	1/1:2,0:7:14.97:122,15,0
chr10	20394950	.	A	AGG	349.98	PASS	AB=0.756;AC=16;AF=0.286;AN=56;BaseQRankSum=3.319;DP=493;FS=5.392;HRun=11;HaplotypeScore=108.2267;InbreedingCoeff=0.6079;MQ=71.60;MQ0=1;MQRankSum=-1.139;QD=2.41;ReadPosRankSum=-3.252;VQSLOD=-0.6939;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:12,0:27:32.04:32,0,37	1/1:3,0:6:7.95:36,8,0	0/0:16,0:12:20.57:0,21,176	0/0:10,0:10:8.17:0,8,58	0/1:17,0:17:2.37:2,0,65	0/0:13,0:14:26.74:0,27,244	0/0:27,0:31:59.34:0,59,550	1/1:8,0:11:12.50:153,13,0	1/1:8,6:16:14.91:150,15,0	0/0:9,0:10:14.75:0,15,128	0/0:12,0:12:11.94:0,12,110	0/0:22,0:22:35.10:0,35,348	0/0:20,0:20:29.85:0,30,285	0/0:15,0:17:23.35:0,23,191	1/1:8,0:18:12.96:55,13,0	0/0:20,0:21:38.71:0,39,361	0/0:33,0:36:82.96:0,83,784	0/0:25,0:27:59.49:0,59,541	0/0:12,0:16:26.19:0,26,210	0/0:9,0:10:17.73:0,18,157	0/0:46,0:49:56.41:0,56,576	0/0:8,0:8:15.02:0,15,145	0/0:7,0:8:17.55:0,18,149	0/0:19,0:21:41.49:0,41,372	0/1:8,0:15:6.23:6,0,47	0/1:8,0:14:18.11:30,0,18	1/1:8,0:16:10.34:46,10,0	1/1:3,0:5:4.87:17,5,0
chr10	20395253	.	A	AT	11327.83	PASS	AB=0.563;AC=45;AF=0.804;AN=56;BaseQRankSum=-11.338;DP=554;FS=18.145;HRun=9;HaplotypeScore=52.5197;InbreedingCoeff=0.8803;MQ=82.24;MQ0=0;MQRankSum=-2.742;QD=25.17;ReadPosRankSum=5.119;VQSLOD=3.5068;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,14:16:30.08:332,30,0	1/1:2,4:6:12.03:133,12,0	0/0:16,0:16:28.72:0,29,230	0/0:15,0:15:20.94:0,21,173	1/1:2,22:25:65.97:697,66,0	1/1:3,24:27:69.19:763,69,0	1/1:1,17:19:47.96:512,48,0	0/0:34,0:33:48.65:0,49,172	0/0:18,0:18:47.97:0,48,413	1/1:2,17:19:51.12:553,51,0	1/1:3,15:18:22.08:472,22,0	1/1:3,18:21:51.14:562,51,0	1/1:5,20:25:51.14:564,51,0	1/1:3,11:14:30.08:332,30,0	0/0:21,0:20:62.94:0,63,538	1/1:3,16:19:45.12:498,45,0	1/1:4,18:22:51.14:564,51,0	1/1:4,18:22:48.13:531,48,0	1/1:10,18:29:42.94:664,43,0	0/1:2,7:9:6.15:148,0,6	1/1:3,11:14:27.07:299,27,0	1/1:4,13:17:13.05:371,13,0	1/1:6,15:21:48.13:527,48,0	1/1:2,19:21:8.28:485,8,0	1/1:5,24:29:32.54:718,33,0	1/1:3,20:23:60.13:645,60,0	1/1:2,20:22:57.15:624,57,0	1/1:0,12:12:30.08:332,30,0
chr10	20395262	.	TA	T	684.51	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-4.470;DP=542;FS=0.000;HRun=3;HaplotypeScore=88.0707;InbreedingCoeff=0.9676;MQ=81.88;MQ0=0;MQRankSum=-0.878;QD=28.52;ReadPosRankSum=-2.169;VQSLOD=2.2269;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:35.88:0,36,276	0/0:4,0:4:11.95:0,12,91	0/0:18,0:18:43.98:0,44,525	0/0:11,0:12:29.97:0,30,335	0/0:24,0:24:68.73:0,69,524	0/0:28,0:28:80.73:0,81,626	0/0:17,0:17:47.81:0,48,362	1/1:3,21:24:66.09:779,66,0	0/0:22,0:22:66.12:0,66,799	0/0:21,0:21:59.83:0,60,480	0/0:21,0:21:59.83:0,60,484	0/0:18,0:18:50.81:0,51,387	0/0:22,0:22:56.80:0,57,450	0/0:12,0:12:32.89:0,33,254	0/0:25,0:24:69.18:0,69,874	0/0:18,0:18:53.84:0,54,446	0/0:22,0:22:65.80:0,66,524	0/0:21,0:21:56.79:0,57,434	0/0:30,0:30:74.25:0,74,643	0/0:11,0:11:32.93:0,33,297	0/0:10,0:10:29.89:0,30,228	0/0:16,0:16:47.77:0,48,376	0/0:21,0:21:59.83:0,60,481	0/0:22,0:22:56.81:0,57,452	0/0:30,0:30:83.75:0,84,668	0/0:23,0:23:65.79:0,66,517	0/0:23,0:23:62.79:0,63,487	0/0:12,0:12:29.89:0,30,227
chr10	20398442	.	ACACT	A	4625.24	PASS	AB=0.997;AC=44;AF=0.786;AN=56;BaseQRankSum=1.046;DP=744;FS=12.085;HRun=0;HaplotypeScore=188.8668;InbreedingCoeff=-0.2945;MQ=56.99;MQ0=16;MQRankSum=2.941;QD=6.22;ReadPosRankSum=-0.032;VQSLOD=2.8664;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:39,0:37:93.20:342,0,93	0/1:16,0:16:22.94:129,0,23	0/1:18,0:6:19.98:20,0,27	0/1:22,0:9:33.09:42,0,33	0/1:24,0:24:99:197,0,141	1/1:15,1:16:11.43:98,11,0	1/1:26,3:29:20.56:129,21,0	1/1:19,0:18:11.36:173,11,0	1/1:32,0:32:41.93:217,42,0	1/1:41,1:40:47.98:623,48,0	1/1:18,0:18:16.94:90,17,0	1/1:35,2:37:34.76:236,35,0	1/1:27,3:29:31.35:230,31,0	1/1:18,0:18:16.94:86,17,0	1/1:38,1:39:18.06:155,18,0	1/1:26,0:26:25.94:153,26,0	0/1:35,0:34:19.03:94,0,19	1/1:29,0:29:26.15:159,26,0	0/1:22,1:21:35.35:323,0,35	1/1:16,0:16:14.43:107,14,0	1/1:49,1:47:0.72:60,1,0	1/1:26,0:26:7.96:42,8,0	0/1:21,0:21:16.95:49,0,17	1/1:38,1:39:25.63:201,26,0	0/1:25,0:24:99:114,0,268	0/1:27,0:26:51.61:330,0,52	0/1:17,0:17:72.95:146,0,73	0/1:11,0:10:74.34:78,0,74
chr10	20398444	.	ACT	A	9026.04	PASS	AB=0.880;AC=53;AF=0.946;AN=56;BaseQRankSum=-1.363;DP=735;FS=6.393;HRun=0;HaplotypeScore=154.9407;InbreedingCoeff=-0.1018;MQ=57.24;MQ0=16;MQRankSum=1.799;QD=12.28;ReadPosRankSum=-0.668;VQSLOD=3.8698;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:35,4:37:44.92:601,45,0	1/1:14,1:15:26.32:247,26,0	0/1:16,0:6:15.58:20,0,16	0/1:23,0:10:29.88:57,0,30	1/1:24,0:24:1.79:204,2,0	1/1:2,15:17:12.02:160,12,0	1/1:4,23:28:22.28:317,22,0	1/1:20,0:19:14.35:193,14,0	1/1:1,31:32:48.14:705,48,0	1/1:7,33:38:61.90:889,62,0	1/1:0,19:19:18:273,18,0	1/1:4,33:37:35.59:468,36,0	1/1:5,24:28:34.03:399,34,0	1/1:0,17:17:18.06:272,18,0	1/1:5,33:38:21.15:612,21,0	1/1:0,26:26:27.08:409,27,0	1/1:6,28:33:3.54:393,4,0	1/1:2,27:29:29.99:403,30,0	0/1:10,13:21:35.16:312,0,35	1/1:1,15:16:15.03:203,15,0	1/1:10,37:44:1.08:166,1,0	1/1:1,25:26:8.71:136,9,0	1/1:2,19:21:6.91:124,7,0	1/1:4,35:39:32.93:363,33,0	1/1:22,2:23:1.93:243,2,0	1/1:27,0:26:42.89:420,43,0	1/1:18,0:18:26.91:311,27,0	1/1:11,0:10:2.54:125,3,0
chr10	20399604	.	G	GGT	1508.61	PASS	AB=0.562;AC=10;AF=0.179;AN=56;BaseQRankSum=-1.709;DP=718;FS=2.696;HRun=0;HaplotypeScore=135.2645;InbreedingCoeff=0.2416;MQ=73.07;MQ0=5;MQRankSum=2.151;QD=7.62;ReadPosRankSum=2.394;VQSLOD=3.2339;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:9,0:43:71.83:343,0,72	0/1:3,0:9:26.62:93,0,27	0/0:43,0:31:51.03:0,51,715	0/0:35,0:27:35.83:0,36,633	0/1:4,0:27:50.52:307,0,51	0/0:4,0:26:24.36:0,24,208	0/0:5,0:26:51.28:0,51,218	0/0:33,0:34:97.11:0,97,1234	0/0:18,0:18:54.12:0,54,791	0/0:8,0:28:45.63:0,46,316	0/0:3,0:16:3.22:0,3,93	0/0:2,0:18:10.77:0,11,91	0/0:2,0:21:31.02:0,31,83	0/0:3,0:21:29.43:0,29,127	0/0:27,0:27:81.19:0,81,1175	0/0:4,0:32:11.03:0,11,171	0/0:2,0:30:32.28:0,32,170	0/0:4,0:25:44.79:0,45,169	0/0:4,0:16:29.04:0,29,154	0/1:5,0:31:18.93:19,0,156	0/0:9,1:21:21.54:0,22,203	0/0:1,0:22:20.08:0,20,88	0/0:6,0:21:32.94:0,33,177	0/0:7,0:38:48.91:0,49,302	0/1:3,0:19:15.40:138,0,15	0/1:8,1:26:98.39:241,0,98	1/1:1,1:29:39.28:404,39,0	1/1:0,0:11:18.25:120,18,0
chr10	20400115	.	A	AC	1511.15	PASS	AB=0.697;AC=10;AF=0.179;AN=56;BaseQRankSum=-7.504;DP=698;FS=0.508;HRun=9;HaplotypeScore=131.1353;InbreedingCoeff=0.5108;MQ=83.93;MQ0=0;MQRankSum=-0.567;QD=12.09;ReadPosRankSum=-2.254;VQSLOD=2.0774;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:11,13:24:35.68:323,0,36	1/1:4,6:10:6.02:66,6,0	0/0:25,0:25:35.68:0,36,292	0/0:18,0:18:15.68:0,16,177	0/1:17,4:21:1.55:189,0,2	0/0:13,0:13:32.95:0,33,286	0/0:32,0:32:77.95:0,78,672	0/0:24,0:26:2.43:0,2,214	0/0:30,0:31:86.01:0,86,734	0/0:18,0:18:44.94:0,45,390	0/0:14,0:14:21.01:0,21,294	0/0:36,0:36:86.88:0,87,744	0/0:44,0:44:99:0,102,885	0/0:30,0:30:74.94:0,75,649	0/0:31,0:31:71.96:0,72,625	0/0:40,0:40:95.95:0,96,828	0/0:35,0:35:95.92:0,96,827	0/0:19,0:19:47.99:0,48,416	0/0:18,0:18:41.98:0,42,364	0/0:19,0:19:44.96:0,45,390	0/0:41,0:41:92.87:0,93,798	0/0:22,0:22:53.98:0,54,468	0/0:31,0:31:80.94:0,81,700	0/0:30,0:30:68.95:0,69,599	0/1:5,18:23:40.50:232,0,41	0/1:11,6:17:47.74:178,0,48	1/1:2,19:22:44.95:479,45,0	1/1:2,6:8:18.05:199,18,0
chr10	20402776	.	TACAC	T	5270.59	PASS	AB=0.958;AC=20;AF=0.357;AN=56;BaseQRankSum=-6.557;DP=723;FS=16.080;HRun=0;HaplotypeScore=178.9101;InbreedingCoeff=0.3745;MQ=58.01;MQ0=11;MQRankSum=2.627;QD=14.81;ReadPosRankSum=2.557;VQSLOD=3.7169;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:41:66.23:0,66,1258	0/0:7,0:7:12.04:0,12,272	0/0:23,0:6:6.02:0,6,88	0/0:26,0:12:11.71:0,12,152	0/0:34,0:34:57.19:0,57,1135	1/1:18,0:17:20.95:260,21,0	1/1:16,0:16:15.36:216,15,0	1/1:4,24:28:72.24:1123,72,0	0/0:24,0:24:41.96:0,42,639	0/1:39,0:40:22.37:783,0,22	0/1:11,1:14:8.62:148,0,9	0/1:23,0:24:46.67:47,0,71	0/1:30,0:30:45.01:344,0,45	1/1:19,0:19:3.01:47,3,0	0/0:33,0:33:83.06:0,83,1603	0/0:31,0:31:81.25:0,81,1690	0/0:31,0:31:66.23:0,66,1335	0/0:19,0:19:54.18:0,54,1101	1/1:7,7:14:8.23:301,8,0	0/1:29,0:30:26.19:408,0,26	0/1:21,0:22:6.22:117,0,6	1/1:29,0:30:18.93:459,19,0	0/1:25,0:25:1.96:519,0,2	0/1:45,0:46:91.94:499,0,92	0/0:27,0:27:30.09:0,30,573	0/0:29,0:29:60.41:0,60,1142	0/0:27,0:26:44.70:0,45,1035	0/0:11,0:11:21.02:0,21,411
chr10	20402790	.	C	CAG	1654.37	PASS	AB=0.906;AC=15;AF=0.268;AN=56;BaseQRankSum=5.909;DP=757;FS=2.730;HRun=0;HaplotypeScore=188.9803;InbreedingCoeff=0.0279;MQ=52.96;MQ0=11;MQRankSum=0.663;QD=5.03;ReadPosRankSum=-0.762;VQSLOD=3.0824;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:43:46.20:0,46,390	0/0:9,0:9:20.93:0,21,172	0/0:21,0:2:6.02:0,6,73	0/0:31,0:10:17.85:0,18,162	0/0:36,0:36:45.95:0,46,434	1/1:17,0:18:19.20:147,19,0	1/1:14,0:14:1.46:38,1,0	0/0:37,0:37:55.43:0,55,249	0/0:26,0:26:45.15:0,45,646	0/1:37,3:40:22.45:370,0,22	0/1:16,2:18:10.76:144,0,11	0/1:12,19:32:27.10:27,0,72	0/1:22,4:26:13.93:254,0,14	0/0:4,0:21:0.82:0,1,2	0/0:38,0:37:80.63:0,81,1216	0/0:32,0:32:96.21:0,96,1289	0/0:28,0:28:75.14:0,75,990	0/0:21,0:21:60.06:0,60,801	0/1:17,0:17:12.22:12,0,116	0/1:27,1:28:2.87:132,0,3	0/1:18,1:19:35.13:92,0,35	0/1:30,3:33:40.81:58,0,41	0/1:29,2:31:5.42:124,0,5	0/1:37,6:43:15.96:396,0,16	0/0:24,0:24:21.02:0,21,209	0/0:32,0:32:32.19:0,32,384	0/0:27,0:26:44.40:0,44,429	0/1:9,0:8:19.09:19,0,139
chr10	20402794	.	CAG	C	573.68	PASS	AB=0.958;AC=11;AF=0.204;AN=54;BaseQRankSum=0.283;DP=785;FS=3.465;HRun=0;HaplotypeScore=200.9219;InbreedingCoeff=0.0052;MQ=52.20;MQ0=12;MQRankSum=0.556;QD=1.99;ReadPosRankSum=-2.737;VQSLOD=2.3334;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:44,1:43:94.29:167,0,94	0/1:9,0:9:51.39:51,0,52	./.	0/0:35,0:11:0.89:0,1,2	0/1:34,1:35:99:105,0,134	0/0:21,0:20:23.83:0,24,197	0/0:18,0:18:6.43:0,6,53	0/0:48,0:48:52.63:0,53,306	1/1:14,12:27:8.86:82,9,0	0/0:43,0:43:64.08:0,64,612	0/0:17,0:17:20.86:0,21,185	0/0:31,0:31:3.94:0,4,177	0/0:24,0:24:37.43:0,37,317	0/1:22,0:22:0.11:0,0,0	0/1:37,0:36:60.83:61,0,653	0/1:31,1:32:22.70:23,0,728	0/0:27,2:29:13.72:0,14,534	0/0:24,0:24:22.97:0,23,466	0/0:20,0:20:14.99:0,15,147	0/0:26,0:26:18.48:0,18,196	0/0:19,0:19:8.60:0,9,76	0/0:33,0:33:10.56:0,11,158	0/0:31,0:31:31.22:0,31,278	0/0:48,0:48:64.77:0,65,548	0/1:20,2:22:5.90:6,0,85	0/1:28,2:32:90.62:154,0,91	0/1:24,1:26:63.51:64,0,193	0/0:8,0:7:5.61:0,6,67
chr10	20402838	.	CAG	C	2492.57	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=7.268;DP=886;FS=3.255;HRun=0;HaplotypeScore=205.9602;InbreedingCoeff=0.9792;MQ=60.61;MQ0=23;MQRankSum=1.314;QD=17.07;ReadPosRankSum=1.557;VQSLOD=3.3952;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:17,17:34:45.01:522,45,0	1/1:3,6:9:21.07:263,21,0	0/0:73,0:15:26.12:0,26,231	0/0:106,0:31:14.70:0,15,284	1/1:9,12:20:32.78:414,33,0	0/0:30,0:29:62.76:0,63,914	0/0:27,0:27:33.28:0,33,626	0/0:36,0:36:72.23:0,72,1127	0/0:25,0:25:45.07:0,45,653	0/0:34,0:33:80.03:0,80,1111	0/0:22,0:22:39.09:0,39,568	0/0:30,0:30:36.11:0,36,556	0/0:31,0:31:77.47:0,77,1073	0/0:22,0:22:29.98:0,30,464	0/0:39,0:38:87.30:0,87,1437	0/0:33,0:33:78.22:0,78,1213	0/0:28,0:28:63.18:0,63,994	0/0:26,0:26:66.19:0,66,1038	0/0:23,0:23:34.97:0,35,594	0/0:17,0:17:36.08:0,36,562	0/0:32,0:31:41.86:0,42,764	0/0:34,0:34:42.12:0,42,662	0/0:27,0:26:45.05:0,45,677	0/0:42,0:42:71.92:0,72,1123	1/1:7,13:20:12.03:135,12,0	1/1:15,17:34:48.26:899,48,0	1/1:11,13:24:32.78:341,33,0	1/1:1,3:4:9.03:113,9,0
chr10	20402877	.	GAC	G	3473.89	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=12.299;DP=839;FS=4.026;HRun=0;HaplotypeScore=194.5440;InbreedingCoeff=0.9271;MQ=60.27;MQ0=3;MQRankSum=-2.991;QD=23.01;ReadPosRankSum=0.866;VQSLOD=4.1594;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:12,24:36:66.14:778,66,0	1/1:4,12:16:27.08:332,27,0	0/0:43,0:22:44.47:0,44,487	0/0:54,0:35:46.47:0,46,769	1/1:7,15:22:32.76:388,33,0	0/0:29,0:29:71.23:0,71,1080	0/0:27,0:27:60.20:0,60,977	0/0:44,1:44:62.33:0,62,1423	0/0:32,1:33:56.39:0,56,1425	0/0:32,0:31:75.16:0,75,1163	0/0:20,0:20:46.42:0,46,779	0/0:32,0:32:78.23:0,78,1208	0/0:37,1:38:68.37:0,68,1557	0/0:23,1:24:23.17:0,23,844	0/0:37,0:37:90.31:0,90,1464	0/0:31,1:32:38.31:0,38,1104	0/0:37,0:37:99:0,99,1566	0/0:23,0:23:52.84:0,53,875	0/0:18,1:19:2.21:0,2,522	0/0:15,0:15:42.14:0,42,683	0/0:53,0:53:99:0,135,2132	0/0:26,0:26:57.19:0,57,928	0/0:22,1:23:2.20:0,2,525	0/0:45,0:45:84.12:0,84,1340	1/1:1,15:17:41.92:477,42,0	1/1:8,27:35:29.29:871,29,0	1/1:5,13:18:38.94:443,39,0	1/1:2,5:7:15.05:185,15,0
chr10	20403053	.	GAGAA	G	5121.51	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=14.087;DP=1012;FS=0.000;HRun=0;HaplotypeScore=283.1620;InbreedingCoeff=0.9982;MQ=58.27;MQ0=2;MQRankSum=-13.349;QD=32.62;ReadPosRankSum=-7.940;VQSLOD=2.5504;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:17,20:37:55.02:883,55,0	1/1:1,7:8:24.03:339,24,0	0/0:40,0:29:62.79:0,63,1252	0/0:45,0:37:63.08:0,63,1336	1/1:7,25:32:76.75:852,77,0	0/0:32,0:32:90.27:0,90,2211	0/0:27,0:26:75.25:0,75,1895	0/0:63,0:61:99:0,168,3843	0/0:42,0:42:99:0,123,3118	0/0:66,0:66:99:0,196,4664	0/0:29,0:29:81.15:0,81,1961	0/0:38,0:38:99:0,102,2392	0/0:41,0:41:99:0,120,3007	0/0:29,0:29:78.14:0,78,1807	0/0:47,0:47:99:0,141,3590	0/0:38,0:38:99:0,108,2832	0/0:30,0:30:84.25:0,84,2080	0/0:24,0:24:57.46:0,57,1673	0/0:28,0:27:81.18:0,81,1802	0/0:35,0:35:91.84:0,92,2352	0/0:54,0:54:99:0,144,3588	0/0:34,0:34:65.94:0,66,2280	0/0:39,0:39:99:0,111,2885	0/0:74,0:74:99:0,167,4153	1/1:7,17:24:66.15:834,66,0	1/1:12,21:33:59.22:1280,59,0	1/1:1,16:17:44.99:628,45,0	1/1:0,6:6:18.06:306,18,0
chr10	20403067	.	AAC	A	2661.32	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=12.088;DP=1028;FS=2.752;HRun=0;HaplotypeScore=266.5168;InbreedingCoeff=0.9885;MQ=57.83;MQ0=2;MQRankSum=-9.366;QD=15.75;ReadPosRankSum=-7.284;VQSLOD=1.3039;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:30,15:45:75.93:651,76,0	1/1:5,6:11:21.01:223,21,0	0/0:40,0:26:45.90:0,46,611	0/0:45,0:32:44.50:0,45,793	1/1:11,21:32:44.75:377,45,0	0/0:32,0:32:75.21:0,75,1152	0/0:27,0:26:60.12:0,60,941	0/0:57,0:57:99:0,138,2245	0/0:41,0:41:73.42:0,73,1667	0/0:66,1:67:99:0,104,2669	0/0:30,0:30:75.13:0,75,1192	0/0:39,0:39:75.19:0,75,1173	0/0:43,0:43:99:0,108,1745	0/0:32,0:33:54.11:0,54,841	0/0:47,0:47:99:0,101,1956	0/0:42,0:42:99:0,126,1964	0/0:27,0:27:69.24:0,69,1144	0/0:25,0:25:65.23:0,65,1008	0/0:32,0:31:75.19:0,75,1125	0/0:36,0:36:52.37:0,52,1370	0/0:55,0:55:99:0,141,2110	0/0:35,0:35:93.28:0,93,1501	0/0:40,0:40:99:0,102,1638	0/0:64,0:65:99:0,125,2015	1/1:7,17:24:49.87:426,50,0	1/1:19,13:32:29.20:637,29,0	1/1:4,15:19:44.90:433,45,0	1/1:3,3:6:9.03:111,9,0
chr10	20403131	.	TAC	T	9614.23	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=9.707;DP=919;FS=0.000;HRun=0;HaplotypeScore=305.3503;InbreedingCoeff=0.9864;MQ=51.58;MQ0=4;MQRankSum=-9.650;QD=22.26;ReadPosRankSum=-2.143;VQSLOD=4.1231;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:74.99:0,75,1009	0/0:13,0:13:21.04:0,21,266	0/0:45,0:25:58.68:0,59,797	0/0:47,0:29:57.01:0,57,863	0/0:28,0:28:45.10:0,45,538	1/1:7,18:25:60.14:733,60,0	1/1:4,16:20:39.08:505,39,0	1/1:19,28:47:99:1349,111,0	0/0:41,0:41:99:0,111,1749	1/1:7,40:47:99:1444,105,0	1/1:3,17:20:18.06:233,18,0	1/1:4,30:34:59.98:763,60,0	1/1:9,27:36:72.21:902,72,0	1/1:2,31:33:50.91:657,51,0	0/0:57,0:57:99:0,159,2573	0/0:54,0:54:99:0,147,2433	0/0:32,0:32:77.28:0,77,1214	0/0:22,0:22:60.19:0,60,978	1/1:7,18:24:27.11:596,27,0	1/1:10,27:37:54.17:700,54,0	1/1:13,7:20:9.03:117,9,0	1/1:9,22:31:54.18:698,54,0	1/1:11,17:28:57.17:723,57,0	1/1:9,20:29:15.44:196,15,0	0/0:26,0:26:36.03:0,36,450	0/0:43,1:43:59.47:0,59,1052	0/0:20,0:20:29.87:0,30,305	0/0:10,0:10:15.83:0,16,177
chr10	20403145	.	GAC	G	3150.46	PASS	AB=0.985;AC=33;AF=0.589;AN=56;BaseQRankSum=19.528;DP=902;FS=3.787;HRun=0;HaplotypeScore=346.0589;InbreedingCoeff=0.4232;MQ=49.10;MQ0=3;MQRankSum=-12.974;QD=5.28;ReadPosRankSum=2.704;VQSLOD=1.9758;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:46,0:46:21.25:108,0,21	0/1:12,0:12:2.11:60,0,2	0/0:37,0:20:54.67:0,55,686	0/0:47,0:31:56.28:0,56,882	0/1:25,0:25:32.32:103,0,32	1/1:26,2:28:12:108,12,0	1/1:23,0:23:3.63:43,4,0	1/1:48,0:47:56.76:541,57,0	0/0:40,0:40:99:0,111,1891	0/1:43,1:44:23.27:454,0,23	1/1:19,0:19:3.65:31,4,0	1/1:35,0:35:26.59:185,27,0	1/1:36,1:37:19.16:229,19,0	1/1:32,0:32:41.98:203,42,0	0/0:56,0:56:99:0,133,2684	0/0:53,0:53:99:0,159,2606	0/0:36,0:36:93.94:0,94,1725	0/0:21,0:21:63.08:0,63,1027	1/1:24,1:24:20.68:239,21,0	1/1:32,0:32:20.38:117,20,0	0/0:15,0:15:0.08:0,0,13	1/1:36,0:36:8.93:81,9,0	1/1:32,0:32:22.21:97,22,0	0/1:27,1:28:9.24:9,0,16	1/1:22,0:22:3.26:86,3,0	1/1:43,0:42:12.21:497,12,0	0/1:18,1:19:2.99:92,0,3	0/1:11,0:11:27.50:58,0,28
chr10	20403147	.	CAG	C	9966.50	PASS	AB=0.647;AC=41;AF=0.732;AN=56;BaseQRankSum=17.293;DP=896;FS=3.161;HRun=0;HaplotypeScore=322.3684;InbreedingCoeff=0.8576;MQ=48.37;MQ0=3;MQRankSum=-10.461;QD=16.47;ReadPosRankSum=-4.225;VQSLOD=3.6786;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:22,24:46:76.98:662,77,0	1/1:4,8:12:18.06:228,18,0	0/0:37,0:20:32.76:0,33,444	0/0:46,0:32:54.76:0,55,839	1/1:12,13:25:35.95:420,36,0	1/1:10,19:29:41.26:342,41,0	1/1:6,16:22:23.66:176,24,0	1/1:14,37:50:99:1491,126,0	0/0:39,0:39:94.55:0,95,1523	1/1:16,27:43:63.87:1138,64,0	1/1:6,11:17:14.87:116,15,0	1/1:11,23:34:48.24:489,48,0	1/1:12,24:36:62.34:598,62,0	1/1:10,21:31:47.26:450,47,0	0/0:55,2:57:77.08:0,77,2259	0/0:54,0:54:99:0,132,2099	0/0:37,0:37:67.20:0,67,1569	0/0:21,0:21:54.18:0,54,863	1/1:14,13:25:12.14:487,12,0	1/1:10,22:32:44.68:381,45,0	1/1:11,4:15:3.61:21,4,0	1/1:6,28:34:44.21:333,44,0	1/1:13,18:31:41.40:324,41,0	1/1:12,13:26:6.19:59,6,0	1/1:8,13:21:32.88:363,33,0	1/1:8,35:42:99:1419,117,0	1/1:10,9:19:26.91:304,27,0	0/1:5,6:11:23.07:163,0,23
chr10	20403181	.	GATAC	G	398.17	PASS	AB=0.923;AC=7;AF=0.125;AN=56;BaseQRankSum=6.700;DP=923;FS=2.159;HRun=0;HaplotypeScore=414.7445;InbreedingCoeff=-0.0386;MQ=50.51;MQ0=5;MQRankSum=-4.509;QD=1.89;ReadPosRankSum=-3.269;VQSLOD=0.6384;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,3:37:2.50:0,2,365	0/0:11,0:11:1.83:0,2,270	0/0:41,0:22:48.89:0,49,1293	0/0:55,0:44:68.90:0,69,2059	0/0:22,0:22:24.01:0,24,456	0/0:28,0:28:5.78:0,6,141	0/0:21,0:21:2.88:0,3,18	0/0:48,0:44:99:0,108,2623	0/0:37,0:37:99:0,111,3040	0/0:60,0:59:38.97:0,39,1868	0/1:18,0:18:0.25:0,0,0	0/1:35,0:35:5.76:6,0,586	0/0:43,0:43:9.81:0,10,374	0/1:38,0:38:10.07:10,0,355	0/0:48,0:48:99:0,141,3691	0/0:58,0:58:99:0,163,4272	0/0:39,0:39:99:0,108,2774	0/0:21,0:21:37.64:0,38,1352	0/0:25,0:22:59.83:0,60,1078	0/1:30,0:30:8.02:8,0,152	0/0:14,0:14:0.35:0,0,45	0/0:32,0:32:2:0,2,74	0/0:27,0:27:2.92:0,3,82	0/1:25,0:25:0.07:0,0,1	0/0:21,0:21:20.61:0,21,236	0/1:34,15:49:99:406,0,1904	0/0:21,0:20:4.69:0,5,688	0/1:9,7:16:71.13:71,0,232
chr10	20403187	.	GACAC	G	406.71	PASS	AB=0.926;AC=9;AF=0.161;AN=56;BaseQRankSum=6.885;DP=896;FS=2.186;HRun=0;HaplotypeScore=392.3134;InbreedingCoeff=-0.0362;MQ=54.79;MQ0=5;MQRankSum=-7.653;QD=1.64;ReadPosRankSum=-2.562;VQSLOD=0.8595;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:23,2:30:0.90:1,0,252	0/0:10,0:11:3.63:0,4,164	0/0:41,0:26:68.88:0,69,1407	0/0:66,0:52:77.74:0,78,2112	0/0:20,0:21:17.93:0,18,232	0/0:27,0:27:4.17:0,4,65	0/1:15,0:15:0.07:0,0,0	0/0:40,0:37:93.20:0,93,1806	0/0:41,0:41:99:0,120,2942	0/0:54,0:53:20.89:0,21,1272	0/1:16,0:16:0.25:0,0,0	0/1:36,0:36:23.53:24,0,392	0/0:43,0:43:7.71:0,8,210	0/1:38,0:38:10.73:11,0,210	0/0:49,0:49:99:0,147,3429	0/0:59,0:59:99:0,169,4183	0/0:40,0:40:99:0,111,2779	0/0:19,0:19:54.08:0,54,1298	0/0:22,0:20:44.90:0,45,705	0/1:28,0:28:20.55:21,0,97	0/0:15,0:15:0.35:0,0,67	0/0:33,0:33:2:0,2,47	0/0:23,0:23:2.92:0,3,59	0/0:23,0:23:0.81:0,1,2	0/0:16,0:21:14.62:0,15,141	0/1:26,15:48:99:382,0,1206	0/1:18,0:22:1.81:2,0,463	0/1:6,6:14:77.67:78,0,142
chr10	20403193	.	C	CACACACAGAGAGAG	17660.43	PASS	AB=0.951;AC=31;AF=0.554;AN=56;BaseQRankSum=13.239;DP=960;FS=11.701;HRun=0;HaplotypeScore=507.6671;InbreedingCoeff=0.1982;MQ=55.78;MQ0=4;MQRankSum=-14.446;QD=27.86;ReadPosRankSum=3.468;VQSLOD=1.5409;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:19,8:29:33.69:1563,0,34	1/1:4,7:12:21.07:961,21,0	0/0:43,0:32:76.76:0,77,1743	0/0:68,0:53:89.36:0,89,2703	1/1:8,9:24:9.01:480,9,0	0/1:19,0:31:25.82:314,0,26	0/1:16,0:16:1.68:57,0,2	0/1:50,0:47:99:745,0,853	0/0:44,0:44:99:0,126,4368	0/1:51,0:50:99:1424,0,229	1/1:22,0:22:1.76:51,2,0	0/1:38,0:39:99:523,0,114	0/1:49,0:49:12.54:661,0,13	0/1:39,0:39:72.45:238,0,72	0/0:52,0:52:99:0,153,5216	0/0:59,0:59:99:0,172,6322	0/0:40,0:39:99:0,108,4090	0/0:19,0:19:51.76:0,52,1821	0/1:27,0:25:99:711,0,286	0/1:33,0:33:29.28:297,0,29	1/1:18,0:19:11.90:202,12,0	1/1:21,0:36:20.65:369,21,0	1/1:25,0:25:11.89:202,12,0	0/1:23,0:23:5.17:48,0,5	1/1:10,8:21:18.06:956,18,0	1/1:40,6:46:99:5040,126,0	1/1:10,14:28:39.13:2114,39,0	1/1:11,1:12:8.07:703,8,0
chr10	20403201	.	G	GAGAGAGAGAGAGAGAGAGAG	22959.61	PASS	AB=1.000;AC=39;AF=0.696;AN=56;BaseQRankSum=12.467;DP=971;FS=8.584;HRun=0;HaplotypeScore=556.4941;InbreedingCoeff=0.7266;MQ=57.42;MQ0=2;MQRankSum=-15.275;QD=35.71;ReadPosRankSum=-0.809;VQSLOD=0.7618;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:26:24.78:795,0,25	1/1:10,0:10:18.02:457,18,0	0/0:45,0:35:24.86:0,25,1365	0/0:71,0:55:23.91:0,24,2002	1/1:24,0:23:8.77:290,9,0	1/1:31,0:31:21.94:931,22,0	1/1:19,0:19:2.69:233,3,0	1/1:46,0:43:66.09:1977,66,0	0/0:40,0:40:99:0,108,4312	1/1:51,0:50:99:5828,129,0	0/1:21,0:21:0.85:144,0,1	1/1:41,0:41:40.89:1354,41,0	1/1:30,26:60:45.15:1461,45,0	1/1:38,0:38:26.83:733,27,0	0/0:47,0:47:99:0,132,5317	0/0:65,0:65:99:0,156,6474	0/0:41,0:40:98.87:0,99,4000	0/0:18,0:18:48.08:0,48,1818	1/1:26,0:25:49.67:1907,50,0	1/1:32,0:32:15.58:518,16,0	1/1:20,0:20:9.55:326,10,0	1/1:34,0:34:19.66:1100,20,0	1/1:30,0:30:11.91:585,12,0	0/1:24,0:24:17.47:137,0,17	1/1:22,0:22:18.29:601,18,0	1/1:45,0:45:99:2170,111,0	1/1:29,0:28:38.78:1031,39,0	1/1:14,0:14:16.07:381,16,0
chr10	20403220	.	ACT	A	479.20	PASS	AB=0.959;AC=16;AF=0.286;AN=56;BaseQRankSum=4.600;DP=927;FS=1.555;HRun=0;HaplotypeScore=281.4340;InbreedingCoeff=-0.2914;MQ=65.76;MQ0=3;MQRankSum=-3.790;QD=1.10;ReadPosRankSum=-10.653;VQSLOD=-0.2190;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:27:43.83:44,0,217	1/1:7,0:7:0.94:2,1,0	0/0:61,0:52:99:0,107,2012	0/0:76,0:54:99:0,112,1754	0/0:32,0:31:41.54:0,42,378	0/0:24,0:24:29.83:0,30,251	0/1:20,0:20:11.67:12,0,285	0/1:49,0:45:63.91:64,0,620	0/0:34,0:34:99:0,99,1824	0/1:43,4:45:99:122,0,782	0/1:18,2:20:5.97:6,0,283	0/1:33,6:39:99:100,0,483	0/0:48,0:48:29.06:0,29,490	0/1:26,3:29:36.16:36,0,371	0/0:48,0:48:99:0,132,2330	0/0:60,0:60:99:0,172,3238	0/0:32,0:31:81.28:0,81,1549	0/0:14,0:14:33.57:0,34,689	0/1:19,2:21:84.82:85,0,212	0/1:25,1:26:50.36:50,0,327	0/1:28,0:28:32.16:32,0,251	0/1:25,0:25:25.26:25,0,241	0/0:27,2:28:3.42:0,3,381	0/1:24,1:25:8.44:8,0,218	0/0:18,0:18:17.43:0,17,180	0/1:44,1:45:34.02:34,0,720	0/1:27,0:26:9.58:10,0,157	0/0:15,0:15:18.20:0,18,353
chr10	20404863	.	CAAAT	C	6755.25	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=14.796;DP=614;FS=3.776;HRun=0;HaplotypeScore=109.2226;InbreedingCoeff=0.9983;MQ=65.81;MQ0=0;MQRankSum=-3.521;QD=47.57;ReadPosRankSum=2.771;VQSLOD=5.8492;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,25:32:78.22:1350,78,0	1/1:0,6:6:18.06:326,18,0	0/0:29,0:27:50.23:0,50,1133	0/0:18,0:15:33.09:0,33,662	1/1:1,24:25:69.23:1190,69,0	0/0:23,0:23:65.94:0,66,1575	0/0:14,0:14:39.11:0,39,915	0/0:22,0:22:60.20:0,60,1467	0/0:22,0:22:60.21:0,60,1537	0/0:20,0:20:51.17:0,51,1258	0/0:28,0:28:78.27:0,78,1969	0/0:18,0:18:54.18:0,54,1357	0/0:15,0:15:42.14:0,42,1053	0/0:17,0:17:48.16:0,48,1193	0/0:33,0:33:87.30:0,87,2195	0/0:26,0:26:66.23:0,66,1629	0/0:22,0:22:63.19:0,63,1581	0/0:27,0:27:72.23:0,72,1757	0/0:30,0:30:72.23:0,72,1751	0/0:26,0:26:75.26:0,75,1927	0/0:23,0:23:66.21:0,66,1585	0/0:24,0:24:63.20:0,63,1522	0/0:15,0:15:39.12:0,39,931	0/0:20,0:20:57.16:0,57,1347	1/1:3,15:18:54.19:962,54,0	1/1:7,17:24:57.19:1020,57,0	1/1:3,25:28:81.28:1460,81,0	1/1:0,9:9:27.01:446,27,0
chr10	20404951	.	C	CA	6494.25	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=16.860;DP=628;FS=1.102;HRun=1;HaplotypeScore=89.4526;InbreedingCoeff=0.9929;MQ=76.12;MQ0=0;MQRankSum=-1.815;QD=38.66;ReadPosRankSum=0.286;VQSLOD=5.1553;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,32:34:81.24:1190,81,0	1/1:1,6:7:18.06:270,18,0	0/0:22,0:21:53.84:0,54,665	0/0:21,0:21:47.77:0,48,578	1/1:4,22:26:57.14:810,57,0	0/0:27,0:27:81.26:0,81,1052	0/0:13,0:13:39.13:0,39,506	0/0:34,0:34:99:0,99,1285	0/0:23,0:23:69.19:0,69,867	0/0:21,0:20:63.19:0,63,797	0/0:20,0:20:57.14:0,57,705	0/0:14,0:14:42.14:0,42,545	0/0:19,0:19:57.17:0,57,725	0/0:13,0:13:39.13:0,39,506	0/0:38,0:38:99:0,114,1463	0/0:17,0:17:51.17:0,51,662	0/0:19,0:19:51.17:0,51,662	0/0:19,0:19:54.18:0,54,700	0/0:19,0:19:54.17:0,54,688	0/0:17,0:17:51.15:0,51,647	0/0:28,0:28:84.27:0,84,1091	0/0:25,0:25:72.23:0,72,935	0/0:34,0:34:96.30:0,96,1231	0/0:17,0:17:48.16:0,48,623	1/1:0,39:39:99:1709,114,0	1/1:3,26:29:48.28:1167,48,0	1/1:3,26:29:78.26:1169,78,0	1/1:0,4:4:12.04:180,12,0
chr10	20406157	.	AC	A	13179.80	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=9.193;DP=737;FS=0.322;HRun=8;HaplotypeScore=77.8754;InbreedingCoeff=0.9680;MQ=85.11;MQ0=1;MQRankSum=-3.908;QD=24.05;ReadPosRankSum=4.204;VQSLOD=5.3786;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:13,40:53:99:1101,114,0	1/1:0,7:7:21.03:203,21,0	0/0:31,0:31:72.18:0,72,812	0/0:23,0:23:54.14:0,54,608	1/1:3,26:29:78.12:753,78,0	1/1:1,23:24:66.11:637,66,0	1/1:6,20:26:57.08:550,57,0	1/1:9,29:38:84.12:811,84,0	0/0:20,0:20:57.15:0,57,665	1/1:4,21:25:66.06:623,66,0	1/1:1,14:15:36.06:347,36,0	1/1:2,21:23:63.10:608,63,0	1/1:1,26:27:72.12:695,72,0	1/1:0,31:31:87.14:840,87,0	0/0:29,0:29:81.23:0,81,951	0/0:21,0:21:60.16:0,60,710	0/0:30,0:30:87.26:0,87,1040	0/0:35,0:34:99:0,102,1220	1/1:2,15:17:45.02:425,45,0	1/1:3,11:15:44.10:411,44,0	1/1:6,46:52:99:1246,129,0	1/1:6,23:29:63.09:606,63,0	1/1:3,20:23:54.08:521,54,0	1/1:4,31:35:87.13:840,87,0	1/1:3,21:24:66.10:637,66,0	1/1:4,26:30:75.10:718,75,0	1/1:1,23:24:60.09:579,60,0	1/1:0,1:1:3:29,3,0
chr10	20407410	.	GGCAGAGGATGTTGCACTGTTTCCAT	G	652.40	PASS	AB=0.967;AC=13;AF=0.250;AN=52;BaseQRankSum=2.384;DP=1558;FS=1.585;HRun=0;HaplotypeScore=156.9868;InbreedingCoeff=0.1785;MQ=20.58;MQ0=668;MQRankSum=-3.251;QD=0.84;ReadPosRankSum=1.390;VQSLOD=2.7673;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:42,0:19:2.25:2,0,146	0/0:16,0:10:20.55:0,21,241	./.	./.	0/0:29,0:11:15.05:0,15,242	0/0:41,0:15:11.98:0,12,150	0/0:68,0:23:15.04:0,15,167	0/1:102,0:3:0:0,0,0	0/0:39,0:16:16.30:0,16,355	0/1:97,41:61:99:628,0,1013	0/0:56,0:20:0.13:0,0,65	1/1:80,0:27:7.24:60,7,0	0/1:81,0:21:9.74:10,0,45	1/1:102,0:32:2.92:17,3,0	0/0:39,0:16:8.74:0,9,145	0/0:32,0:15:15.05:0,15,319	0/1:24,0:13:21.84:22,0,112	0/1:1,0:1:0:0,0,0	0/0:56,0:5:8.89:0,9,84	0/0:72,43:59:18.04:0,18,229	0/1:131,0:57:34.62:35,0,138	0/0:75,0:24:6.01:0,6,62	0/0:43,20:20:3:0,3,28	1/1:80,0:29:0.89:2,1,0	0/0:18,0:6:14.94:0,15,227	0/0:22,0:6:2.06:0,2,91	0/0:21,0:11:15.91:0,16,183	0/0:11,0:8:6.02:0,6,124
chr10	20409028	.	ATT	A	9756.16	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-19.134;DP=689;FS=2.996;HRun=10;HaplotypeScore=122.0712;InbreedingCoeff=0.9972;MQ=76.50;MQ0=2;MQRankSum=-0.973;QD=27.80;ReadPosRankSum=1.267;VQSLOD=4.4887;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:98.51:0,99,1117	0/0:10,0:10:21.06:0,21,231	0/0:34,0:20:34.10:0,34,425	0/0:20,0:17:15.24:0,15,262	0/0:40,0:40:99:0,107,1111	1/1:2,29:31:75.20:836,75,0	1/1:1,26:27:60.16:669,60,0	1/1:1,21:22:57.15:635,57,0	0/0:20,0:21:36.91:0,37,450	1/1:4,16:20:48.09:524,48,0	1/1:3,25:28:66.17:736,66,0	1/1:1,15:16:42.10:468,42,0	1/1:2,29:31:84.22:937,84,0	1/1:1,21:22:57.14:635,57,0	0/0:23,0:23:63.61:0,64,647	0/0:21,0:21:48.58:0,49,515	0/0:28,0:28:78.17:0,78,800	0/0:12,0:12:33.96:0,34,345	1/1:5,25:31:77.81:829,78,0	1/1:1,27:28:75.19:836,75,0	1/1:3,29:31:81.21:903,81,0	1/1:2,18:20:48.12:533,48,0	1/1:1,21:23:59.61:647,60,0	1/1:1,19:19:51.14:569,51,0	0/0:25,0:25:72.62:0,73,734	0/0:27,1:28:43.50:0,44,669	0/0:24,0:25:70.04:0,70,714	0/0:10,0:10:30.08:0,30,322
chr10	20411131	.	AT	A	5842.16	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=13.394;DP=596;FS=0.000;HRun=8;HaplotypeScore=58.0548;InbreedingCoeff=0.9910;MQ=77.85;MQ0=0;MQRankSum=-0.647;QD=22.73;ReadPosRankSum=4.138;VQSLOD=5.1531;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,14:14:33.05:319,33,0	1/1:0,4:4:9.01:87,9,0	0/0:15,0:15:26.48:0,26,276	0/0:15,0:14:35.84:0,36,407	1/1:4,40:44:99:984,102,0	0/0:26,0:26:69.21:0,69,833	0/0:14,0:14:39.10:0,39,457	0/0:28,0:28:63.19:0,63,761	1/1:1,18:19:48.08:463,48,0	0/0:27,0:27:78.23:0,78,934	0/0:24,0:24:69.20:0,69,824	0/0:26,0:26:75.23:0,75,901	0/0:30,0:30:87.27:0,87,1050	0/0:14,0:14:39.12:0,39,471	1/1:2,20:22:54.09:522,54,0	1/1:1,21:22:57.09:550,57,0	1/1:1,22:23:51.08:492,51,0	1/1:1,16:17:42.07:405,42,0	0/0:29,0:28:84.25:0,84,1002	0/0:34,0:34:90.27:0,90,1075	0/0:8,0:8:21.06:0,21,253	0/0:22,0:22:60.18:0,60,718	0/0:15,0:15:42.13:0,42,507	0/0:12,0:12:33.10:0,33,399	1/1:3,15:18:33.05:319,33,0	1/1:5,27:32:81.09:773,81,0	1/1:3,23:26:60.09:579,60,0	1/1:2,14:16:36.06:348,36,0
chr10	20411248	.	ATT	A	3833.18	PASS	AB=0.773;AC=24;AF=0.429;AN=56;BaseQRankSum=14.858;DP=477;FS=0.391;HRun=7;HaplotypeScore=77.7234;InbreedingCoeff=0.8204;MQ=74.46;MQ0=1;MQRankSum=-2.283;QD=20.28;ReadPosRankSum=3.368;VQSLOD=1.5951;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,0:6:12.01:115,12,0	1/1:1,0:6:14.97:136,15,0	0/0:21,0:15:3.28:0,3,131	0/1:8,1:7:21.76:22,0,75	1/1:12,1:22:41.82:385,42,0	0/0:26,0:26:69.21:0,69,1134	0/0:8,0:8:24.08:0,24,416	0/0:32,0:32:90.31:0,90,1510	1/1:1,11:12:24.07:292,24,0	0/0:29,0:29:78.23:0,78,1304	0/0:29,0:29:81.28:0,81,1384	0/0:16,0:16:42.11:0,42,654	0/0:24,0:24:72.22:0,72,1220	0/0:16,0:16:48.16:0,48,798	1/1:1,11:12:21.07:266,21,0	1/1:2,17:19:36.11:456,36,0	1/1:1,8:9:18.06:228,18,0	1/1:2,17:20:38.86:467,39,0	0/0:17,0:17:39.13:0,39,660	0/0:19,0:19:48.15:0,48,782	0/0:18,0:18:48.15:0,48,791	0/0:13,0:13:39.13:0,39,663	0/0:15,0:15:42.14:0,42,722	0/0:5,0:5:15.04:0,15,218	1/1:5,1:15:32.77:272,33,0	0/1:9,0:20:49.60:367,0,50	1/1:11,1:29:66.70:596,67,0	1/1:4,0:10:26.66:234,27,0
chr10	20411255	.	T	TA	2006.52	PASS	AB=0.874;AC=27;AF=0.482;AN=56;BaseQRankSum=11.419;DP=480;FS=13.924;HRun=12;HaplotypeScore=82.8364;InbreedingCoeff=0.7420;MQ=66.94;MQ0=1;MQRankSum=-1.199;QD=8.50;ReadPosRankSum=-1.578;VQSLOD=0.6955;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,0:7:17.76:99,18,0	1/1:5,0:5:11.34:61,11,0	0/0:14,0:8:3.75:0,4,42	0/1:8,0:6:0.67:1,0,13	1/1:22,0:22:49.31:297,49,0	0/0:22,1:23:27.67:0,28,361	0/0:9,0:9:26.82:0,27,193	0/0:28,2:31:9.55:0,10,382	1/1:13,0:13:17.98:120,18,0	0/0:28,0:28:31.55:0,32,345	0/1:26,3:29:8.98:9,0,364	0/0:15,0:15:38.67:0,39,275	0/0:24,0:24:56.60:0,57,411	0/0:16,1:17:9.02:0,9,231	1/1:12,0:12:22.43:122,22,0	1/1:17,0:16:37.64:216,38,0	1/1:12,0:12:23.52:147,24,0	1/1:24,0:24:28.71:218,29,0	0/0:16,0:16:10.53:0,11,155	0/0:15,1:17:8.14:0,8,200	0/0:17,0:17:35.76:0,36,261	0/0:16,0:17:25.19:0,25,266	0/0:14,2:16:3.68:0,4,190	0/1:3,2:5:28.28:46,0,28	1/1:14,0:14:22.75:130,23,0	1/1:24,0:24:22.56:267,23,0	1/1:32,0:32:52.74:381,53,0	1/1:12,0:12:13.07:104,13,0
chr10	20412283	.	CAA	C	12438.71	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-4.082;DP=541;FS=10.272;HRun=12;HaplotypeScore=70.5549;InbreedingCoeff=0.8398;MQ=66.40;MQ0=2;MQRankSum=-1.024;QD=23.78;ReadPosRankSum=3.574;VQSLOD=3.9281;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,27:30:74.90:744,75,0	1/1:0,10:10:30.07:305,30,0	0/0:9,0:9:14.61:0,15,140	0/0:8,0:6:8.59:0,9,66	1/1:3,24:27:51.01:519,51,0	1/1:4,19:23:53.84:531,54,0	1/1:6,17:23:9.40:474,9,0	1/1:3,16:19:48.09:488,48,0	1/1:4,14:18:36.06:366,36,0	1/1:2,12:15:35.81:348,36,0	1/1:1,16:18:44.80:439,45,0	1/1:2,16:19:44.82:439,45,0	1/1:3,21:24:54.09:549,54,0	1/1:2,19:21:51.09:519,51,0	1/1:1,19:21:53.84:531,54,0	1/1:2,10:14:2.30:254,2,0	1/1:0,29:29:87.20:885,87,0	1/1:4,18:22:51.11:519,51,0	1/1:2,12:14:30:299,30,0	1/1:3,21:24:60.09:610,60,0	1/1:3,16:21:32.77:388,33,0	1/1:0,9:9:24.04:244,24,0	1/1:4,12:17:35.80:347,36,0	1/1:1,23:24:63.14:641,63,0	1/1:1,17:18:45.08:458,45,0	1/1:0,24:24:72.13:717,72,0	1/1:8,20:29:53.42:583,53,0	1/1:0,8:8:24.05:244,24,0
chr10	20412484	.	AAAAAAAC	A	2162.39	PASS	AB=0.998;AC=28;AF=0.500;AN=56;BaseQRankSum=-3.491;DP=469;FS=0.919;HRun=0;HaplotypeScore=142.0083;InbreedingCoeff=0.0214;MQ=72.25;MQ0=1;MQRankSum=-4.723;QD=6.21;ReadPosRankSum=-0.449;VQSLOD=1.8786;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:28,1:29:51.94:199,0,52	1/1:5,0:5:6.31:40,6,0	0/1:22,0:14:19.84:20,0,358	0/0:22,0:14:13.14:0,13,260	0/1:17,0:17:11.69:76,0,12	0/0:20,0:20:11.93:0,12,56	0/1:20,0:20:24.51:25,0,39	0/1:9,0:9:19.72:20,0,41	1/1:7,0:7:17.68:154,18,0	0/1:19,0:19:36.33:36,0,59	0/1:16,0:16:12.55:13,0,86	0/0:19,0:19:30.74:0,31,212	0/1:19,0:19:14.14:38,0,14	0/1:11,0:11:4.08:7,0,4	1/1:14,1:15:29.90:336,30,0	1/1:16,0:16:17.70:174,18,0	1/1:23,1:24:35.41:497,35,0	1/1:21,1:22:32.97:362,33,0	0/1:17,0:17:1:1,0,206	0/0:16,0:15:9.07:0,9,124	0/0:8,0:8:1.55:0,2,4	0/1:8,0:8:9.52:23,0,10	0/0:18,0:18:15.15:0,15,176	0/0:18,0:18:7.97:0,8,50	0/1:19,0:19:21.65:107,0,22	0/1:25,0:25:25.60:119,0,26	1/1:19,0:19:15.50:85,16,0	0/1:9,0:9:7.08:7,0,25
chr10	20412485	.	AAAAAAC	A	5678.11	PASS	AB=1.000;AC=45;AF=0.804;AN=56;BaseQRankSum=-4.542;DP=470;FS=0.000;HRun=0;HaplotypeScore=123.5946;InbreedingCoeff=0.0660;MQ=72.28;MQ0=1;MQRankSum=-1.673;QD=12.67;ReadPosRankSum=1.781;VQSLOD=3.8427;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:30:43.66:516,44,0	1/1:5,0:5:11.61:98,12,0	0/1:22,0:14:43.67:44,0,302	0/0:22,0:14:11.67:0,12,213	1/1:17,1:18:38.23:253,38,0	1/1:20,0:20:36.85:162,37,0	1/1:18,1:19:19.51:133,20,0	0/1:8,0:8:4.75:40,0,5	1/1:4,3:7:19.18:214,19,0	1/1:19,0:19:28.28:191,28,0	0/1:16,0:16:0.60:109,0,1	0/1:19,0:19:25.19:102,0,25	1/1:19,0:19:22.44:158,22,0	1/1:10,0:10:10.79:60,11,0	1/1:3,12:15:30.04:525,30,0	1/1:4,12:16:22.27:350,22,0	1/1:15,9:24:60.94:834,61,0	1/1:5,17:22:32.98:537,33,0	0/1:17,0:17:51.17:106,0,51	0/1:16,0:15:5.43:79,0,5	1/1:8,0:8:2.60:10,3,0	1/1:7,1:8:21.27:99,21,0	0/1:18,0:18:25.56:90,0,26	0/1:18,0:18:3.11:3,0,7	1/1:17,2:19:7.62:252,8,0	1/1:25,1:26:56.31:473,56,0	1/1:20,0:20:20.97:185,21,0	0/1:9,0:9:2.20:57,0,2
chr10	20412486	.	AAAAAC	A	8699.22	PASS	AB=1.000;AC=54;AF=0.964;AN=56;BaseQRankSum=-5.240;DP=471;FS=0.000;HRun=0;HaplotypeScore=106.2657;InbreedingCoeff=0.0850;MQ=71.45;MQ0=1;MQRankSum=-1.898;QD=18.47;ReadPosRankSum=0.801;VQSLOD=4.2376;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:17,13:30:77.12:994,77,0	1/1:1,4:5:12.03:191,12,0	0/1:22,0:14:24.90:25,0,245	0/1:20,0:13:5.96:6,0,140	1/1:2,16:18:43.13:319,43,0	1/1:19,1:20:44.91:391,45,0	1/1:17,2:19:31.96:303,32,0	1/1:7,2:9:14.73:161,15,0	1/1:7,0:7:20.93:199,21,0	1/1:19,1:20:49.96:428,50,0	1/1:16,0:16:37.53:345,38,0	1/1:19,0:19:33.29:287,33,0	1/1:5,14:19:24.50:321,24,0	1/1:9,1:10:12:129,12,0	1/1:13,2:15:30.05:411,30,0	1/1:15,1:16:24.03:303,24,0	1/1:23,1:24:62.89:728,63,0	1/1:22,0:22:32.98:396,33,0	1/1:17,1:18:8.82:282,9,0	1/1:17,0:16:38.35:272,38,0	1/1:9,0:9:3:25,3,0	1/1:7,1:8:23.88:184,24,0	1/1:18,0:18:27.29:307,27,0	1/1:17,0:17:7.76:46,8,0	1/1:6,13:19:22.12:422,22,0	1/1:2,23:25:64.58:770,65,0	1/1:2,18:20:21.06:357,21,0	1/1:2,7:9:10.52:101,11,0
chr10	20412487	.	AAAAC	A	9966.02	PASS	AB=1.000;AC=53;AF=0.946;AN=56;BaseQRankSum=-5.006;DP=470;FS=2.266;HRun=0;HaplotypeScore=94.9689;InbreedingCoeff=0.4397;MQ=71.44;MQ0=1;MQRankSum=-1.449;QD=22.10;ReadPosRankSum=0.535;VQSLOD=4.6659;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:30:80.10:828,80,0	1/1:4,1:5:12.04:162,12,0	0/1:21,0:14:25.07:25,0,190	0/0:19,0:12:6.80:0,7,111	1/1:17,1:18:43.39:302,43,0	1/1:1,19:20:45.11:700,45,0	1/1:4,15:19:32.98:433,33,0	1/1:9,0:9:17.99:167,18,0	1/1:7,0:7:20.93:187,21,0	1/1:3,17:20:54.05:678,54,0	1/1:11,5:16:41.86:454,42,0	1/1:16,5:21:56.39:560,56,0	1/1:15,4:19:27.04:368,27,0	1/1:2,8:10:12.04:187,12,0	1/1:15,0:15:30.04:346,30,0	1/1:16,0:16:24.02:256,24,0	1/1:24,0:24:65.86:668,66,0	1/1:21,0:21:32.97:350,33,0	1/1:15,3:18:39.19:457,39,0	1/1:8,9:16:43.58:451,44,0	1/1:0,9:9:3.01:50,3,0	1/1:2,6:8:23.97:335,24,0	1/1:14,4:18:49.60:465,50,0	1/1:1,15:16:8.97:93,9,0	1/1:18,1:19:31.86:374,32,0	1/1:24,1:25:66.02:667,66,0	1/1:19,1:20:21.07:274,21,0	1/1:9,0:9:11.99:129,12,0
chr10	20412488	.	AAAC	A	8677.72	PASS	AB=1.000;AC=53;AF=0.946;AN=56;BaseQRankSum=-4.779;DP=471;FS=3.902;HRun=0;HaplotypeScore=92.6167;InbreedingCoeff=0.3015;MQ=71.47;MQ0=1;MQRankSum=-1.562;QD=19.24;ReadPosRankSum=0.761;VQSLOD=4.1207;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:31,1:32:86.62:812,87,0	1/1:5,0:5:12.03:128,12,0	0/1:20,0:13:20.89:21,0,132	0/0:20,0:13:0.68:0,1,91	1/1:18,0:18:43.39:297,43,0	1/1:20,0:20:45.08:477,45,0	1/1:18,1:19:33:345,33,0	1/1:10,0:10:20.97:182,21,0	1/1:7,0:7:20.93:176,21,0	1/1:20,0:20:54.02:522,54,0	1/1:16,0:16:41.90:380,42,0	1/1:19,2:21:58.60:569,59,0	1/1:19,0:19:27.02:279,27,0	1/1:10,0:10:12.03:131,12,0	1/1:15,0:15:30.02:294,30,0	1/1:15,0:15:23.98:222,24,0	1/1:24,0:24:65.74:582,66,0	1/1:21,0:21:32.95:304,33,0	1/1:16,2:18:52.02:504,52,0	1/1:17,0:16:44.62:387,45,0	1/1:9,0:9:3.01:33,3,0	1/1:8,0:8:23.96:235,24,0	1/1:16,2:18:50.86:458,51,0	1/1:16,0:16:8.96:76,9,0	1/1:19,0:19:33.02:330,33,0	1/1:25,0:25:66:605,66,0	1/1:20,0:20:21.05:223,21,0	1/1:9,0:9:11.99:107,12,0
chr10	20412489	.	AAC	A	7780.93	PASS	AB=1.000;AC=54;AF=0.964;AN=56;BaseQRankSum=-4.798;DP=466;FS=2.709;HRun=0;HaplotypeScore=88.4440;InbreedingCoeff=0.0378;MQ=71.63;MQ0=1;MQRankSum=-2.151;QD=16.70;ReadPosRankSum=0.945;VQSLOD=4.7332;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:32,0:32:86.70:733,87,0	1/1:5,0:5:12:105,12,0	0/1:20,0:13:22.35:22,0,73	0/1:20,0:13:8.99:9,0,56	1/1:18,0:18:43.60:292,44,0	1/1:20,0:20:44.99:403,45,0	1/1:19,0:19:32.94:284,33,0	1/1:9,0:9:20.96:175,21,0	1/1:7,0:7:20.91:165,21,0	1/1:19,1:20:53.96:467,54,0	1/1:16,0:16:41.89:358,42,0	1/1:20,1:21:58.25:515,58,0	1/1:19,0:19:26.96:233,27,0	1/1:9,0:9:12:108,12,0	1/1:15,0:15:29.92:243,30,0	1/1:15,0:15:23.88:188,24,0	1/1:24,0:24:65.43:517,65,0	1/1:20,0:20:32.87:258,33,0	1/1:16,2:18:53.98:492,54,0	1/1:16,0:15:44.76:364,45,0	1/1:9,0:9:3:27,3,0	1/1:8,0:8:23.93:207,24,0	1/1:18,0:18:50.85:424,51,0	1/1:16,0:16:8.97:77,9,0	1/1:19,0:19:32.95:280,33,0	1/1:25,0:25:65.93:553,66,0	1/1:19,0:19:20.93:182,21,0	1/1:9,0:9:11.97:98,12,0
chr10	20412490	.	AC	A	6963.79	PASS	AB=0.976;AC=54;AF=0.964;AN=56;BaseQRankSum=-4.313;DP=457;FS=0.000;HRun=1;HaplotypeScore=84.2381;InbreedingCoeff=0.0072;MQ=71.16;MQ0=1;MQRankSum=-1.616;QD=15.24;ReadPosRankSum=1.546;VQSLOD=4.6092;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:31,0:31:86.06:654,86,0	1/1:5,0:5:11.89:83,12,0	0/1:18,0:12:29.52:38,0,30	0/1:19,1:13:11.11:11,0,43	1/1:18,0:18:43.59:288,44,0	1/1:20,0:20:44.69:321,45,0	1/1:19,0:19:32.75:233,33,0	1/1:9,0:9:20.89:167,21,0	1/1:8,0:8:23.84:180,24,0	1/1:19,0:19:53.75:410,54,0	1/1:14,1:15:41.82:333,42,0	1/1:19,0:19:56.88:469,57,0	1/1:18,1:19:26.79:189,27,0	1/1:9,0:9:11.92:85,12,0	1/1:15,0:15:29.58:194,30,0	1/1:14,0:14:23.73:164,24,0	1/1:22,1:23:64.75:458,65,0	1/1:18,0:18:32.54:214,33,0	1/1:19,1:20:59.86:497,60,0	1/1:16,0:15:44.72:339,45,0	1/1:9,0:9:2.98:22,3,0	1/1:8,0:8:23.83:169,24,0	1/1:17,0:17:50.78:403,51,0	1/1:16,0:16:8.93:67,9,0	1/1:18,0:18:32.73:237,33,0	1/1:25,0:25:65.66:504,66,0	1/1:19,0:19:20.79:144,21,0	1/1:9,0:9:11.92:89,12,0
chr10	20412747	.	G	GA	4254.55	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=3.588;DP=546;FS=9.293;HRun=9;HaplotypeScore=66.2796;InbreedingCoeff=0.9947;MQ=76.83;MQ0=0;MQRankSum=-0.595;QD=18.42;ReadPosRankSum=1.011;VQSLOD=4.6980;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,23:25:63:678,63,0	1/1:0,9:9:27.07:299,27,0	0/0:18,0:18:14.12:0,14,247	0/0:16,0:15:23.08:0,23,246	1/1:3,16:19:48.13:528,48,0	0/0:18,0:20:46.05:0,46,376	0/0:16,0:16:38.95:0,39,330	0/0:27,0:27:62.95:0,63,544	1/1:2,0:13:31.62:181,32,0	0/0:30,0:30:86.98:0,87,753	0/0:18,0:18:44.99:0,45,391	0/0:15,0:15:35.98:0,36,313	0/0:17,1:18:17.81:0,18,383	0/0:23,1:24:39.08:0,39,566	1/1:3,0:23:42.61:214,43,0	1/1:6,0:22:34.09:170,34,0	1/1:8,3:24:34.42:208,34,0	1/1:2,0:18:43.15:215,43,0	0/0:21,0:21:50.94:0,51,438	0/0:25,0:25:62.96:0,63,543	0/0:18,0:18:44.99:0,45,391	0/0:11,0:11:29.99:0,30,260	0/0:16,0:16:41.98:0,42,364	0/0:20,0:20:56.96:0,57,490	1/1:4,22:26:22.07:472,22,0	1/1:5,21:26:40.10:660,40,0	1/1:3,12:15:30.08:332,30,0	1/1:0,11:11:27.07:299,27,0
chr10	20413340	.	TG	T	12165.14	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=4.598;DP=668;FS=1.614;HRun=1;HaplotypeScore=95.4418;InbreedingCoeff=0.9978;MQ=92.34;MQ0=0;MQRankSum=-6.525;QD=38.74;ReadPosRankSum=-0.457;VQSLOD=4.8763;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:96.33:0,96,1530	0/0:12,0:12:33.11:0,33,524	0/0:28,0:28:78.23:0,78,1195	0/0:29,0:29:77.39:0,77,1212	0/0:27,0:27:81.25:0,81,1241	1/1:1,14:15:39.13:545,39,0	1/1:1,34:35:96.28:1313,96,0	1/1:0,20:20:57.17:774,57,0	0/0:22,0:22:60.20:0,60,958	1/1:3,16:19:57.17:756,57,0	1/1:1,15:16:45.10:593,45,0	1/1:2,25:27:81.26:1110,81,0	1/1:1,19:20:60.20:835,60,0	1/1:5,24:29:87.26:1162,87,0	0/0:31,0:31:81.26:0,81,1270	0/0:25,0:25:75.24:0,75,1175	0/0:23,0:23:69.22:0,69,1078	0/0:28,0:28:78.25:0,78,1222	1/1:0,14:14:42.14:576,42,0	1/1:0,27:27:75.21:1025,75,0	1/1:2,32:34:90.19:1191,90,0	1/1:2,16:18:51.15:682,51,0	1/1:0,12:12:36.08:478,36,0	1/1:1,27:28:81.27:1127,81,0	0/0:30,0:30:81.28:0,81,1294	0/0:18,1:19:15.23:0,15,801	0/0:31,0:31:84.29:0,84,1339	0/0:11,0:11:30.10:0,30,466
chr10	20413389	.	A	AT	19802.23	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-5.262;DP=664;FS=1.060;HRun=6;HaplotypeScore=80.1653;InbreedingCoeff=0.9322;MQ=71.88;MQ0=0;MQRankSum=-5.318;QD=31.18;ReadPosRankSum=3.911;VQSLOD=5.1744;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,39:43:90.29:1132,90,0	1/1:1,5:6:15.05:188,15,0	0/0:15,0:12:5.93:0,6,123	0/0:14,0:14:21.70:0,22,179	1/1:3,26:29:72.23:902,72,0	1/1:5,10:15:36.11:441,36,0	1/1:7,25:32:87.27:1077,87,0	1/1:13,19:32:78.24:969,78,0	1/1:2,25:27:66.21:830,66,0	1/1:3,15:18:54.17:670,54,0	1/1:5,13:18:45.14:555,45,0	1/1:5,28:33:90.28:1113,90,0	1/1:3,24:27:71.93:872,72,0	1/1:6,28:34:93.30:1167,93,0	1/1:1,29:30:72.23:906,72,0	1/1:1,21:22:60.19:754,60,0	1/1:1,22:23:66.21:830,66,0	1/1:0,29:29:84.27:1057,84,0	1/1:12,9:21:42.60:525,43,0	1/1:2,26:28:78.25:974,78,0	1/1:8,14:22:46.34:531,46,0	1/1:3,20:23:63.20:792,63,0	1/1:3,12:15:33.11:415,33,0	1/1:3,12:15:35.84:436,36,0	1/1:0,23:23:60.19:755,60,0	1/1:6,19:25:57.17:703,57,0	1/1:7,23:30:54.17:679,54,0	1/1:0,15:15:42.13:528,42,0
chr10	20414320	.	T	TG	2883.35	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-5.336;DP=570;FS=6.494;HRun=6;HaplotypeScore=62.9765;InbreedingCoeff=0.9768;MQ=74.19;MQ0=1;MQRankSum=0.940;QD=23.83;ReadPosRankSum=2.798;VQSLOD=3.4891;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,22:28:48.15:604,48,0	1/1:1,9:10:15.05:185,15,0	0/0:15,0:16:24.73:0,25,201	0/0:12,0:11:7.54:0,8,60	1/1:1,21:22:48.05:581,48,0	0/0:20,0:20:54.12:0,54,551	0/0:28,0:28:66.11:0,66,657	0/0:31,0:31:62.38:0,62,639	0/0:17,0:17:42.09:0,42,428	0/0:20,0:20:57.13:0,57,581	0/0:16,0:16:42.09:0,42,424	0/0:25,0:25:72.16:0,72,734	0/0:23,0:23:69.16:0,69,704	0/0:21,0:21:63.14:0,63,642	0/0:24,0:24:69.16:0,69,704	0/0:29,0:29:81.16:0,81,818	0/0:32,0:31:78.13:0,78,785	0/0:17,0:17:45.10:0,45,459	0/0:17,0:17:48.11:0,48,489	0/0:20,0:20:57.02:0,57,566	0/0:19,0:19:45.10:0,45,459	0/0:15,0:15:30.06:0,30,306	0/0:32,0:32:84.17:0,84,850	0/0:14,0:14:36.08:0,36,367	1/1:4,16:20:42.13:517,42,0	1/1:6,16:22:45.13:552,45,0	1/1:0,13:13:39.12:490,39,0	1/1:0,6:6:12.04:151,12,0
chr10	20414599	.	G	GT	14413.78	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=-13.020;DP=687;FS=0.000;HRun=7;HaplotypeScore=59.7061;InbreedingCoeff=0.9745;MQ=71.12;MQ0=2;MQRankSum=-1.865;QD=29.60;ReadPosRankSum=2.102;VQSLOD=5.2898;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,31:34:81.24:970,81,0	1/1:2,8:10:24.07:290,24,0	0/0:31,0:21:48.81:0,49,482	0/0:30,0:21:4.57:0,5,247	1/1:1,23:24:66.20:797,66,0	1/1:2,15:17:45.14:544,45,0	1/1:3,18:21:51.16:616,51,0	1/1:9,33:42:96.29:1158,96,0	0/0:28,0:28:78.11:0,78,747	1/1:2,28:30:84.26:1014,84,0	1/1:1,14:15:33.10:395,33,0	1/1:4,22:26:63.19:761,63,0	1/1:3,21:24:57.17:688,57,0	1/1:3,22:25:57.17:689,57,0	0/0:28,0:28:72.11:0,72,695	0/0:17,0:17:42.07:0,42,405	0/0:35,0:35:98.87:0,99,931	0/0:27,0:27:72.11:0,72,695	1/1:6,11:17:33.10:393,33,0	1/1:5,20:25:63.18:746,63,0	1/1:1,15:16:39.12:471,39,0	1/1:1,16:17:45.14:543,45,0	1/1:3,19:22:57.17:686,57,0	1/1:3,38:41:99:1305,108,0	1/1:3,19:22:48.15:580,48,0	1/1:1,17:18:51.13:595,51,0	1/1:1,24:26:66.07:776,66,0	1/1:0,15:15:33.10:399,33,0
chr10	20416081	.	AG	A	3996.14	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=10.052;DP=687;FS=4.972;HRun=6;HaplotypeScore=71.2278;InbreedingCoeff=0.9980;MQ=86.54;MQ0=1;MQRankSum=-1.404;QD=27.75;ReadPosRankSum=4.447;VQSLOD=4.3416;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,129,1675	0/0:12,0:12:30.09:0,30,381	0/0:33,0:33:71.61:0,72,856	0/0:35,0:33:51.97:0,52,797	0/0:25,0:25:72.21:0,72,912	0/0:17,0:17:51.15:0,51,656	0/0:23,0:23:63.19:0,63,802	0/0:28,0:28:69.07:0,69,823	1/1:1,20:21:54.14:580,54,0	0/0:30,0:30:75.24:0,75,973	0/0:17,0:17:51.14:0,51,635	0/0:23,0:23:66.21:0,66,855	0/0:17,0:17:48.13:0,48,600	0/0:26,0:26:66.19:0,66,838	1/1:1,21:22:57.14:613,57,0	1/1:1,26:27:72.18:773,72,0	1/1:6,40:46:99:1193,111,0	1/1:2,26:28:78.19:838,78,0	0/0:29,0:29:75.24:0,75,974	0/0:13,0:13:36.12:0,36,474	0/0:34,0:34:87.20:0,87,1086	0/0:19,0:19:48.13:0,48,597	0/0:23,0:23:66.16:0,66,835	0/0:22,0:22:54.15:0,54,681	0/0:24,0:23:66.21:0,66,856	0/0:24,0:24:66.21:0,66,851	0/0:20,0:20:57.15:0,57,719	0/0:6,0:6:18.06:0,18,237
chr10	20416332	.	G	GAGC	5203.71	PASS	AB=0.955;AC=11;AF=0.196;AN=56;BaseQRankSum=-10.750;DP=577;FS=3.986;HRun=0;HaplotypeScore=92.8795;InbreedingCoeff=0.9021;MQ=79.62;MQ0=0;MQRankSum=-2.540;QD=44.10;ReadPosRankSum=2.598;VQSLOD=6.5351;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:96.33:0,96,1522	0/0:12,0:12:30.10:0,30,470	0/1:20,0:20:6.78:7,0,447	0/0:19,0:19:44.77:0,45,632	0/0:17,0:17:48.16:0,48,760	0/0:17,0:17:35.87:0,36,570	0/0:24,0:24:66.21:0,66,1017	0/0:21,0:20:39.09:0,39,588	1/1:1,8:9:18.06:393,18,0	0/0:21,0:21:36.12:0,36,571	0/0:17,0:17:51.17:0,51,807	0/0:21,0:21:57.14:0,57,875	0/0:20,0:20:54.18:0,54,854	0/0:22,0:22:57.16:0,57,858	1/1:2,12:14:33.11:721,33,0	1/1:2,14:16:33.11:709,33,0	1/1:5,23:28:75.19:1550,75,0	1/1:4,25:30:84.06:1824,84,0	0/0:12,0:12:27.07:0,27,382	0/0:19,0:19:48.14:0,48,736	0/0:46,0:45:99:0,114,1781	0/0:10,0:10:21.04:0,21,306	0/0:22,0:22:59.89:0,60,950	0/0:34,0:34:99:0,99,1546	0/0:21,0:21:54.18:0,54,856	0/0:19,0:19:48.16:0,48,761	0/0:12,0:12:36.12:0,36,571	0/0:13,0:13:39.13:0,39,618
chr10	20417194	.	T	TCACACACACA	19757.81	PASS	AB=1.000;AC=53;AF=0.946;AN=56;BaseQRankSum=-1.825;DP=649;FS=8.462;HRun=0;HaplotypeScore=171.7994;InbreedingCoeff=0.4099;MQ=61.02;MQ0=8;MQRankSum=-1.748;QD=32.50;ReadPosRankSum=2.392;VQSLOD=4.0835;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:32,0:32:11.96:419,12,0	1/1:15,0:15:11.95:247,12,0	0/0:41,0:21:9.11:0,9,209	0/1:40,0:29:23.65:24,0,104	1/1:16,0:15:6.02:250,6,0	1/1:26,0:26:30.10:780,30,0	1/1:20,0:20:20.70:545,21,0	1/1:27,0:27:48.03:865,48,0	1/1:13,8:24:21.79:977,22,0	1/1:23,0:23:43:893,43,0	1/1:11,0:11:9.03:242,9,0	1/1:22,0:23:24.55:650,25,0	1/1:26,0:25:27.09:708,27,0	1/1:23,0:22:25.69:811,26,0	1/1:9,19:31:54.19:2558,54,0	1/1:13,17:30:36.12:1742,36,0	1/1:13,9:25:20.63:1013,21,0	1/1:3,8:14:15.05:741,15,0	1/1:14,0:14:29.95:481,30,0	1/1:23,0:23:27.09:746,27,0	1/1:21,0:21:3.01:87,3,0	1/1:28,0:28:42.62:1143,43,0	1/1:7,0:7:9.03:206,9,0	1/1:19,0:19:24.08:676,24,0	1/1:24,0:23:21.07:894,21,0	1/1:22,0:22:29.43:787,29,0	1/1:19,0:19:26.12:977,26,0	1/1:22,0:22:9.03:296,9,0
chr10	20417216	.	A	ACACACACACG	21346.76	PASS	AB=1.000;AC=48;AF=0.857;AN=56;BaseQRankSum=0.204;DP=768;FS=8.795;HRun=0;HaplotypeScore=184.3338;InbreedingCoeff=0.1622;MQ=62.24;MQ0=10;MQRankSum=-6.626;QD=29.90;ReadPosRankSum=6.321;VQSLOD=3.2005;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,2:41:5.76:291,6,0	1/1:12,0:12:20.89:275,21,0	0/0:54,0:31:64.06:0,64,871	0/1:43,0:28:1.50:2,0,476	1/1:1,0:21:6.02:260,6,0	1/1:1,0:34:30.10:919,30,0	1/1:3,0:30:32.96:752,33,0	1/1:29,0:30:86.83:1084,87,0	0/1:17,0:17:46.34:764,0,46	1/1:6,0:29:65.02:1191,65,0	1/1:2,0:15:12:306,12,0	1/1:5,0:27:27.94:738,28,0	1/1:7,0:33:27.69:802,28,0	1/1:4,0:30:33.05:983,33,0	0/1:29,0:28:94.54:2044,0,95	0/1:21,0:21:46.69:1541,0,47	0/1:21,0:21:99:327,0,168	0/1:12,0:11:61.82:606,0,62	1/1:5,0:22:58.75:1133,59,0	1/1:1,0:30:27.09:874,27,0	1/1:4,0:33:6.02:193,6,0	1/1:2,0:30:44.34:1307,44,0	1/1:1,0:18:8.24:246,8,0	1/1:0,0:34:21.07:667,21,0	1/1:2,1:26:21.07:972,21,0	1/1:2,1:29:67.63:1683,68,0	1/1:1,1:21:24.96:1055,25,0	1/1:0,0:21:9.03:332,9,0
chr10	20417677	.	G	GAAA	16294.32	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=-14.979;DP=803;FS=2.604;HRun=9;HaplotypeScore=132.9542;InbreedingCoeff=0.9989;MQ=78.49;MQ0=3;MQRankSum=-2.814;QD=28.14;ReadPosRankSum=-0.959;VQSLOD=2.8993;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,0:28:62.76:483,63,0	1/1:0,0:11:26.48:190,26,0	0/0:44,0:31:44.22:0,44,447	0/0:41,0:31:38.86:0,39,509	1/1:10,0:38:78.48:561,78,0	1/1:4,21:28:57.15:1035,57,0	1/1:1,10:13:21.05:378,21,0	1/1:5,27:37:89.72:1438,90,0	0/0:22,0:22:36.25:0,36,159	1/1:7,34:43:99:1638,99,0	1/1:3,15:21:48.43:752,48,0	1/1:5,21:27:51.17:964,51,0	1/1:5,17:23:45.14:854,45,0	1/1:7,23:35:52.38:896,52,0	0/0:23,0:23:52.74:0,53,238	0/0:24,0:24:52.45:0,52,234	0/0:31,0:31:67.10:0,67,288	0/0:38,0:38:34.20:0,34,225	1/1:4,12:21:54.03:782,54,0	1/1:4,21:26:56.97:891,57,0	1/1:3,18:23:48.12:870,48,0	1/1:4,20:26:60.01:991,60,0	1/1:10,29:42:53.08:1011,53,0	1/1:4,23:28:51.15:970,51,0	1/1:8,0:26:35.37:259,35,0	1/1:10,1:33:64.36:528,64,0	1/1:2,0:30:62.72:480,63,0	1/1:2,0:19:43.09:324,43,0
chr10	20417681	.	A	AG	4490.51	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-14.376;DP=786;FS=4.484;HRun=0;HaplotypeScore=141.5530;InbreedingCoeff=0.9983;MQ=76.97;MQ0=3;MQRankSum=-2.728;QD=33.76;ReadPosRankSum=3.985;VQSLOD=4.4098;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:70.08:0,70,428	0/0:11,0:11:23.47:0,23,141	0/0:42,0:29:47.04:0,47,600	0/0:40,0:29:51.96:0,52,707	0/0:34,0:34:80.91:0,81,550	0/0:28,0:28:63.98:0,64,393	0/0:12,0:12:20.37:0,20,123	0/0:40,0:39:97.91:0,98,630	1/1:1,21:22:48.16:670,48,0	0/0:43,0:43:99:0,103,672	0/0:25,0:25:54.42:0,54,362	0/0:28,0:28:50.69:0,51,330	0/0:24,0:24:61.14:0,61,408	0/0:33,0:33:55.73:0,56,362	1/1:0,23:23:56.87:814,57,0	1/1:1,23:24:60.09:831,60,0	1/1:0,29:29:75.25:1071,75,0	1/1:0,35:35:78.26:1104,78,0	0/0:22,0:22:58.22:0,58,381	0/0:27,0:27:60.11:0,60,366	0/0:20,0:20:45.24:0,45,266	0/0:26,0:26:66.73:0,67,417	0/0:38,0:38:61.95:0,62,415	0/0:28,0:28:58.58:0,59,366	0/0:25,0:25:43.67:0,44,347	0/0:30,0:30:76.60:0,77,517	0/0:30,0:30:60.99:0,61,373	0/0:17,0:17:36.17:0,36,242
chr10	20418153	.	AT	A	10033.20	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-5.497;DP=667;FS=9.658;HRun=11;HaplotypeScore=88.8350;InbreedingCoeff=0.9087;MQ=74.60;MQ0=3;MQRankSum=-3.776;QD=16.37;ReadPosRankSum=4.931;VQSLOD=4.9732;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,40:44:99:917,113,0	1/1:1,14:15:38.95:320,39,0	0/0:27,0:20:7.34:0,7,171	0/0:25,0:20:7.47:0,7,179	1/1:0,31:31:80.89:665,81,0	1/1:1,13:14:38.96:320,39,0	1/1:6,21:29:60.19:477,60,0	1/1:5,15:20:41.88:335,42,0	1/1:0,0:18:28.35:82,28,0	1/1:2,18:20:53.92:443,54,0	1/1:2,12:14:32.95:271,33,0	1/1:6,18:24:50.92:419,51,0	1/1:2,23:25:62.88:513,63,0	1/1:6,19:25:53.91:443,54,0	1/1:1,1:19:31.51:107,32,0	1/1:2,0:25:42.56:123,43,0	1/1:2,0:32:51.39:148,51,0	1/1:3,0:31:44.81:129,45,0	1/1:0,13:14:40.98:323,41,0	1/1:5,22:27:24.88:406,25,0	1/1:3,15:18:41.94:345,42,0	1/1:4,19:23:53.93:443,54,0	1/1:1,9:11:28.99:227,29,0	1/1:4,24:28:56.56:467,57,0	1/1:3,21:24:62.91:517,63,0	1/1:5,19:24:56.91:468,57,0	1/1:6,31:37:59.41:704,59,0	1/1:3,17:20:50.93:419,51,0
chr10	20418573	.	C	CTCAGCTA	40658.95	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-5.363;DP=570;FS=10.578;HRun=0;HaplotypeScore=122.0306;InbreedingCoeff=0.9173;MQ=82.09;MQ0=0;MQRankSum=-11.181;QD=79.10;ReadPosRankSum=6.401;VQSLOD=4.9805;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,20:24:48.16:2004,48,0	1/1:0,4:5:9.03:376,9,0	0/0:35,0:35:89.56:0,90,2142	0/0:21,0:21:47.60:0,48,1238	1/1:1,21:29:18.53:752,19,0	1/1:0,16:18:45.15:1880,45,0	1/1:0,17:23:39.12:1624,39,0	1/1:1,14:26:75.21:2548,75,0	1/1:0,15:19:42.14:1754,42,0	1/1:1,13:24:62.69:2111,63,0	1/1:0,13:20:18.06:751,18,0	1/1:1,23:31:60.21:2505,60,0	1/1:0,18:25:56.64:2379,57,0	1/1:0,9:10:27.09:1127,27,0	1/1:0,25:28:72.25:3007,72,0	1/1:0,19:25:57.20:2379,57,0	1/1:2,8:13:24.08:1003,24,0	1/1:0,9:16:27.09:1115,27,0	1/1:0,7:14:39.12:1160,39,0	1/1:0,16:17:18.06:752,18,0	1/1:2,6:9:9.03:376,9,0	1/1:2,10:13:21.07:877,21,0	1/1:1,12:19:18.06:701,18,0	1/1:0,13:18:27.09:1125,27,0	1/1:0,17:20:36.12:1503,36,0	1/1:0,26:29:87.29:3486,87,0	1/1:0,21:30:66.23:2737,66,0	1/1:0,6:8:15.05:627,15,0
chr10	20418839	.	GT	G	4738.60	PASS	AB=0.935;AC=26;AF=0.464;AN=56;BaseQRankSum=2.573;DP=585;FS=1.070;HRun=11;HaplotypeScore=114.1560;InbreedingCoeff=0.8139;MQ=69.59;MQ0=0;MQRankSum=-0.325;QD=16.28;ReadPosRankSum=4.173;VQSLOD=4.7715;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,20:24:26.47:413,26,0	1/1:3,3:6:8.98:74,9,0	0/0:12,0:12:9.22:0,9,89	0/1:8,0:8:11.23:11,0,75	1/1:2,27:29:68.87:565,69,0	0/0:17,1:18:29.47:0,29,510	0/0:24,0:24:69.16:0,69,728	0/0:31,0:31:77.99:0,78,784	1/1:3,17:20:32.96:271,33,0	0/0:23,0:23:57.12:0,57,592	0/0:23,0:24:63.16:0,63,667	0/1:23,4:27:35.43:35,0,468	0/0:18,1:19:17.46:0,17,391	0/0:19,1:20:20.87:0,21,401	1/1:1,20:21:56.92:465,57,0	1/1:2,25:28:68.86:560,69,0	1/1:1,18:19:44.95:369,45,0	1/1:4,15:19:9.96:288,10,0	0/0:15,0:16:42.09:0,42,436	0/0:30,1:31:60.05:0,60,820	0/0:16,2:20:4.50:0,4,414	0/0:15,0:16:35.92:0,36,366	0/0:28,0:28:83.94:0,84,838	0/0:12,0:12:33.08:0,33,352	1/1:3,21:24:56.92:468,57,0	1/1:7,28:35:54.85:653,55,0	1/1:1,25:26:56.87:467,57,0	1/1:0,5:5:11.99:99,12,0
chr10	20419197	.	ATCG	A	23788.26	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-1.516;DP=674;FS=0.712;HRun=0;HaplotypeScore=106.9012;InbreedingCoeff=0.9990;MQ=75.86;MQ0=0;MQRankSum=-9.063;QD=37.29;ReadPosRankSum=6.205;VQSLOD=5.3621;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,20:20:51.12:802,51,0	1/1:3,9:12:27.09:441,27,0	0/0:17,0:17:42.14:0,42,871	0/0:18,0:18:45.08:0,45,851	1/1:2,32:34:66.23:1077,66,0	1/1:3,20:23:57.09:871,57,0	1/1:0,14:14:39.08:607,39,0	1/1:3,31:34:93.24:1413,93,0	1/1:0,14:14:33.11:528,33,0	1/1:1,22:23:63.18:979,63,0	1/1:1,21:22:44.99:644,45,0	1/1:1,30:31:66.17:1048,66,0	1/1:0,23:23:65.34:967,65,0	1/1:2,24:26:57.03:841,57,0	1/1:4,23:27:51.17:833,51,0	1/1:1,31:32:84.23:1341,84,0	1/1:0,30:30:78.27:1274,78,0	1/1:2,28:30:66.23:1078,66,0	1/1:6,16:22:48.14:755,48,0	1/1:0,24:24:60.04:890,60,0	1/1:1,26:27:57.19:931,57,0	1/1:3,22:25:51.17:832,51,0	1/1:0,14:14:29.66:447,30,0	1/1:1,31:32:75.26:1225,75,0	1/1:1,21:23:66.12:1017,66,0	1/1:3,23:26:69.24:1124,69,0	1/1:2,31:33:75.15:1164,75,0	1/1:1,16:17:42.10:657,42,0
chr10	20419352	.	C	CCTTC	6105.99	PASS	AB=0.973;AC=38;AF=0.731;AN=52;BaseQRankSum=-8.167;DP=671;FS=3.175;HRun=0;HaplotypeScore=174.9726;InbreedingCoeff=0.3305;MQ=61.89;MQ0=2;MQRankSum=4.569;QD=10.90;ReadPosRankSum=-1.601;VQSLOD=4.0350;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:24:4.13:4,0,47	0/0:11,0:11:12.82:0,13,96	./.	./.	0/0:35,0:34:0.23:0,0,82	0/1:21,4:26:10.93:340,0,11	1/1:27,0:27:21.05:275,21,0	1/1:27,0:27:5.98:58,6,0	1/1:27,0:27:2.37:152,2,0	1/1:38,0:38:46.41:814,46,0	1/1:23,0:23:27.09:534,27,0	1/1:16,0:16:24.54:424,25,0	0/0:13,0:13:19.41:0,19,220	1/1:30,0:30:30:493,30,0	0/1:32,0:32:13.16:138,0,13	1/1:27,0:27:17.94:188,18,0	1/1:29,0:28:4.85:62,5,0	1/1:17,0:17:13.20:119,13,0	1/1:23,0:22:15.04:277,15,0	1/1:22,0:22:15.04:273,15,0	1/1:35,0:35:39.69:608,40,0	1/1:30,0:30:11.45:522,11,0	1/1:24,0:24:9.01:163,9,0	1/1:29,0:29:34:574,34,0	0/1:17,0:17:6.11:6,0,98	0/1:28,0:28:66.39:66,0,181	0/0:29,0:29:11.98:0,12,98	0/1:8,0:8:17.93:18,0,18
chr10	20419369	.	C	CTTCT	3819.30	PASS	AB=0.992;AC=18;AF=0.321;AN=56;BaseQRankSum=7.400;DP=619;FS=2.448;HRun=0;HaplotypeScore=173.4554;InbreedingCoeff=-0.3128;MQ=53.49;MQ0=5;MQRankSum=4.691;QD=8.62;ReadPosRankSum=9.356;VQSLOD=1.9399;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:19:56.26:0,56,450	0/0:10,0:10:28.74:0,29,276	0/0:7,0:6:5.97:0,6,45	0/0:2,0:2:2.99:0,3,23	0/0:26,0:25:66.62:0,67,561	0/1:28,0:28:99:165,0,375	0/1:20,0:20:4.19:4,0,239	0/0:24,0:23:54.79:0,55,386	0/1:30,2:32:99:455,0,137	0/1:40,0:40:99:211,0,546	0/1:19,0:19:99:255,0,183	0/1:21,0:21:99:163,0,271	0/0:15,0:15:41.90:0,42,544	0/1:27,0:27:99:180,0,263	1/1:28,0:28:48.54:514,49,0	0/1:24,1:25:89.67:413,0,90	0/1:25,1:25:5.52:386,0,6	0/1:19,0:19:60.84:184,0,61	0/1:21,0:20:99:134,0,155	0/1:20,0:20:99:103,0,280	0/1:34,0:34:99:203,0,408	0/1:30,0:30:99:206,0,411	0/1:25,0:25:27.79:28,0,383	0/1:28,0:28:99:216,0,307	0/0:16,0:15:43.09:0,43,381	0/0:23,0:23:6.47:0,6,563	0/0:27,0:27:29.96:0,30,311	0/0:6,0:5:6.01:0,6,68
chr10	20419389	.	CTTCTTTCCTTCCTTCT	C	8224.30	PASS	AB=0.992;AC=30;AF=0.577;AN=52;BaseQRankSum=-6.921;DP=595;FS=2.940;HRun=0;HaplotypeScore=339.0087;InbreedingCoeff=-0.3426;MQ=51.55;MQ0=5;MQRankSum=-0.752;QD=14.53;ReadPosRankSum=-11.493;VQSLOD=0.4555;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:22:59.69:828,60,0	1/1:8,0:8:23.95:604,24,0	./.	./.	1/1:26,0:25:65.68:1116,66,0	0/1:20,0:20:27.09:27,0,1376	0/1:20,0:20:41.71:42,0,821	0/1:19,0:18:1.38:1,0,78	0/1:30,0:30:99:195,0,1873	0/1:35,0:35:99:168,0,2508	0/1:19,0:19:11.45:11,0,1461	0/1:26,0:27:3.16:3,0,1690	0/1:20,0:20:5.69:6,0,1596	0/1:22,0:23:69.23:69,0,1654	0/1:25,0:25:99:242,0,1387	0/1:27,0:27:99:360,0,1701	0/1:26,0:25:99:252,0,945	0/1:25,0:25:99:485,0,886	0/0:13,0:13:6.78:0,7,1128	0/0:14,0:14:31.45:0,31,1557	0/1:31,0:32:99:120,0,1857	0/1:35,0:35:84.99:85,0,1724	0/1:14,0:14:15.61:16,0,1253	0/1:31,0:32:99:111,0,1551	1/1:28,0:27:77.82:1444,78,0	0/1:19,0:19:99:1208,0,136	1/1:6,22:27:14.26:568,14,0	1/1:5,0:4:12.02:264,12,0
chr10	20419391	.	T	TC	603.20	PASS	AB=0.877;AC=14;AF=0.259;AN=54;BaseQRankSum=0.718;DP=592;FS=0.432;HRun=1;HaplotypeScore=176.2469;InbreedingCoeff=-0.1967;MQ=51.65;MQ0=5;MQRankSum=4.660;QD=2.03;ReadPosRankSum=5.913;VQSLOD=-0.7553;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:21:36.18:0,36,245	0/0:4,0:8:18.83:0,19,87	0/0:4,0:1:3:0,3,29	./.	0/0:18,0:24:36.25:0,36,218	0/1:16,4:20:60.12:60,0,75	0/0:20,0:20:8.81:0,9,165	0/0:19,0:18:28.71:0,29,347	0/0:29,0:29:57.83:0,58,360	0/1:31,4:35:99:135,0,133	0/1:13,5:18:58.37:86,0,58	0/1:25,2:27:20.48:20,0,168	0/0:21,0:21:51.36:0,51,238	0/1:20,3:23:73.43:73,0,111	0/0:25,0:25:62.81:0,63,339	0/0:27,0:27:70.55:0,71,363	0/0:25,0:24:50.97:0,51,281	0/0:25,0:25:60.56:0,61,283	0/1:12,2:14:43.92:44,0,147	0/1:11,4:15:33.01:33,0,89	0/1:28,5:33:86.89:87,0,149	0/1:32,4:36:84.96:85,0,188	0/1:13,2:15:6.33:6,0,124	0/1:25,4:29:80.82:81,0,149	0/0:21,0:26:39.73:0,40,295	0/0:10,1:19:20.94:0,21,121	1/1:27,0:26:5.23:23,5,0	0/1:5,0:4:13.34:22,0,13
chr10	20419392	.	CTTTCCTTCCTT	C	2566.98	PASS	AB=1.000;AC=16;AF=0.286;AN=56;BaseQRankSum=5.259;DP=591;FS=0.815;HRun=0;HaplotypeScore=275.7448;InbreedingCoeff=0.0892;MQ=51.75;MQ0=5;MQRankSum=0.273;QD=8.91;ReadPosRankSum=-5.004;VQSLOD=1.5645;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:21:74.96:199,0,75	0/1:8,0:8:16.70:337,0,17	0/0:4,0:1:3.01:0,3,71	0/0:1,0:1:3.01:0,3,65	0/1:25,0:25:37.92:395,0,38	0/0:19,0:19:41.97:0,42,981	0/1:20,0:20:3.38:3,0,699	0/0:19,0:18:29.45:0,29,395	0/0:29,0:29:3.78:0,4,1580	0/1:35,0:35:15.13:15,0,1731	0/0:18,0:18:49.49:0,49,1129	0/0:27,0:27:61.03:0,61,1236	0/0:21,0:21:58.34:0,58,1273	0/0:23,0:23:22.58:0,23,1222	0/1:26,0:26:11.33:11,0,1183	0/1:27,0:27:14.47:14,0,1426	0/1:24,0:23:6.97:7,0,851	0/1:24,0:24:76.50:77,0,717	0/0:14,0:14:38.40:0,38,857	0/0:15,0:15:43.97:0,44,1095	0/0:33,0:33:57.23:0,57,1410	0/0:36,0:36:65.27:0,65,1457	0/0:15,0:15:31.13:0,31,925	0/0:29,0:29:37.79:0,38,1195	1/1:27,0:26:14.37:568,14,0	0/1:19,0:19:99:607,0,144	1/1:23,3:25:12.04:358,12,0	1/1:4,1:4:11.60:142,12,0
chr10	20419407	.	TCCTTC	T	1333.47	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=7.589;DP=601;FS=18.699;HRun=0;HaplotypeScore=209.9081;InbreedingCoeff=0.3060;MQ=57.70;MQ0=6;MQRankSum=-0.816;QD=10.75;ReadPosRankSum=0.625;VQSLOD=1.6451;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:16,0:16:11.79:114,0,12	0/1:7,0:7:7.17:187,0,7	0/0:17,0:9:26.59:0,27,530	0/0:5,0:5:12.04:0,12,292	0/1:23,0:23:51.80:220,0,52	0/0:19,0:19:45.15:0,45,1273	0/0:22,0:22:36.92:0,37,1427	0/0:19,0:18:49.93:0,50,1176	0/0:27,0:27:81.20:0,81,1513	0/0:30,0:30:70.15:0,70,2312	0/0:17,0:17:46.97:0,47,1230	0/0:30,0:30:61.25:0,61,2160	0/0:22,0:22:66.23:0,66,1800	0/0:25,0:25:64.35:0,64,1695	0/0:27,0:27:75.16:0,75,1311	0/0:27,0:27:81.22:0,81,1537	0/0:26,0:25:72.19:0,72,1260	0/0:30,0:30:84.14:0,84,1216	0/0:13,0:13:39.13:0,39,1083	0/0:17,0:17:51.18:0,51,1398	0/0:27,0:27:67.67:0,68,1780	0/0:32,0:32:68.42:0,68,2357	0/0:19,0:19:57.20:0,57,1434	0/0:26,0:26:52.68:0,53,1636	0/1:26,0:25:9.67:307,0,10	0/1:17,0:17:66.98:416,0,67	1/1:28,3:29:3.28:166,3,0	1/1:3,1:3:7.75:63,8,0
chr10	20421144	.	G	GT	2580.31	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-7.408;DP=596;FS=1.431;HRun=9;HaplotypeScore=74.9059;InbreedingCoeff=0.9752;MQ=74.62;MQ0=0;MQRankSum=-1.801;QD=23.46;ReadPosRankSum=1.215;VQSLOD=4.5205;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:98.95:0,99,854	0/0:6,0:6:18:0,18,156	0/0:18,0:17:35.89:0,36,303	0/0:7,0:7:8.80:0,9,76	0/0:27,0:28:74.02:0,74,631	0/0:21,0:21:53.45:0,53,446	0/0:21,0:21:53.98:0,54,469	0/0:39,0:39:92.93:0,93,801	1/1:2,0:8:14.35:79,14,0	0/0:36,1:37:69.19:0,69,728	0/0:27,0:27:68.85:0,69,587	0/0:19,0:19:53.96:0,54,461	0/0:17,0:17:47.97:0,48,412	0/0:14,0:14:35.99:0,36,312	1/1:4,20:24:54.15:596,54,0	1/1:3,17:21:41.95:446,42,0	1/1:2,21:23:40.13:671,40,0	1/1:3,31:33:87.24:962,87,0	0/0:19,0:19:14.77:0,15,342	0/0:23,1:25:34.77:0,35,507	0/0:17,0:18:31.98:0,32,261	0/0:12,0:12:23.99:0,24,208	0/0:13,0:13:35.98:0,36,312	0/0:15,0:15:44.99:0,45,391	0/0:20,0:20:53.91:0,54,452	0/0:26,0:26:62.85:0,63,535	0/0:33,0:33:89.94:0,90,772	0/0:14,0:14:41.84:0,42,349
chr10	20421241	.	TA	T	5356.83	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=3.473;DP=536;FS=5.120;HRun=10;HaplotypeScore=69.6965;InbreedingCoeff=0.9437;MQ=66.09;MQ0=0;MQRankSum=0.311;QD=22.32;ReadPosRankSum=-0.495;VQSLOD=5.5789;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:66.12:0,66,706	0/0:11,0:11:27.07:0,27,299	0/0:7,0:7:1.61:0,2,176	0/0:2,0:2:2.99:0,3,23	0/0:32,0:32:90.24:0,90,995	1/1:0,16:16:44.99:391,45,0	1/1:1,20:21:53.99:469,54,0	1/1:7,25:32:71.95:625,72,0	0/0:13,0:13:33.09:0,33,365	1/1:2,13:15:38.99:339,39,0	1/1:0,17:17:50.90:429,51,0	0/0:18,0:18:51.14:0,51,564	1/1:2,13:15:35.99:312,36,0	1/1:0,16:16:41.99:365,42,0	0/0:22,0:22:46.81:0,47,617	0/0:21,0:21:60.16:0,60,664	0/0:19,1:20:31.10:0,31,571	0/0:21,0:21:45.12:0,45,498	1/1:0,20:20:56.97:491,57,0	1/1:2,24:26:43.45:516,43,0	1/1:1,9:10:26.99:234,27,0	1/1:1,16:17:47.86:406,48,0	1/1:3,18:21:47.97:417,48,0	1/1:0,14:14:41.99:365,42,0	0/0:35,2:37:44.16:0,44,943	0/0:22,2:24:14.07:0,14,612	0/0:25,0:25:60.14:0,60,654	0/0:19,0:19:31.88:0,32,563
chr10	20423914	.	A	ATTTT	4810.72	PASS	AB=0.558;AC=15;AF=0.268;AN=56;BaseQRankSum=-11.420;DP=629;FS=5.727;HRun=10;HaplotypeScore=141.0568;InbreedingCoeff=0.4937;MQ=77.38;MQ0=0;MQRankSum=-2.676;QD=19.40;ReadPosRankSum=-2.477;VQSLOD=1.7169;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:34:4.28:0,4,46	0/0:1,0:8:6.88:0,7,17	0/0:9,0:9:13.96:0,14,247	0/0:20,0:20:26.38:0,26,442	0/1:5,0:28:23.79:24,0,62	0/0:3,0:20:19.86:0,20,49	0/0:5,0:18:8.65:0,9,64	0/1:10,0:32:15.75:47,0,16	1/1:3,0:8:9.03:184,9,0	0/0:0,0:14:3.20:0,3,20	0/1:4,0:17:2.58:3,0,18	0/0:5,0:23:23.77:0,24,62	0/0:0,0:22:23.67:0,24,59	0/0:5,0:29:24.83:0,25,61	1/1:5,0:20:42.13:542,42,0	1/1:6,18:29:60.20:1255,60,0	1/1:9,25:37:72.25:1663,72,0	1/1:6,19:27:54.14:1085,54,0	0/0:5,0:21:5.74:0,6,105	0/0:3,0:21:22.40:0,22,55	0/0:9,0:28:22.81:0,23,92	0/0:1,0:14:14.93:0,15,37	0/0:2,0:22:3.74:0,4,28	0/1:4,0:21:6.67:7,0,61	0/0:4,0:23:24.45:0,24,95	0/1:3,0:29:2.45:2,0,36	0/0:6,0:41:27.99:0,28,167	0/0:0,0:14:17.44:0,17,43
chr10	20424592	.	A	AT	9641.09	PASS	AC=24;AF=0.444;AN=54;BaseQRankSum=-13.563;DP=608;FS=8.369;HRun=6;HaplotypeScore=56.8953;InbreedingCoeff=0.9905;MQ=66.05;MQ0=0;MQRankSum=0.521;QD=33.95;ReadPosRankSum=2.379;VQSLOD=4.6905;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,34:35:99:1245,99,0	1/1:2,13:15:30.10:377,30,0	0/0:6,0:6:8.67:0,9,74	./.	1/1:1,28:29:84.18:1020,84,0	0/0:21,0:21:57.13:0,57,581	0/0:29,0:29:87.18:0,87,880	0/0:18,0:18:48.11:0,48,490	1/1:0,18:18:48.15:604,48,0	0/0:23,0:23:54.11:0,54,551	0/0:23,0:23:63.13:0,63,636	0/0:27,0:27:72.13:0,72,725	0/0:25,0:25:69.16:0,69,704	0/0:25,0:25:72.14:0,72,724	1/1:3,18:21:51.16:642,51,0	1/1:1,31:32:93.30:1170,93,0	1/1:3,31:34:93.30:1170,93,0	1/1:1,18:19:54.17:679,54,0	0/0:31,0:31:84.17:0,84,851	0/0:34,0:34:99:0,102,1041	0/0:10,0:10:24.05:0,24,245	0/0:12,0:12:30.06:0,30,306	0/0:16,0:16:36.07:0,36,367	0/0:22,0:22:66.15:0,66,673	1/1:1,23:24:60.19:755,60,0	1/1:2,24:26:44.59:846,45,0	1/1:1,19:20:57.18:717,57,0	1/1:0,11:11:33.11:415,33,0
chr10	20425591	.	GA	G	6631.44	PASS	AB=0.769;AC=50;AF=0.893;AN=56;BaseQRankSum=-0.361;DP=554;FS=4.865;HRun=13;HaplotypeScore=71.8239;InbreedingCoeff=0.1717;MQ=76.85;MQ0=7;MQRankSum=-1.890;QD=12.47;ReadPosRankSum=5.653;VQSLOD=4.9432;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,18:22:35.77:263,36,0	1/1:1,5:6:8.74:65,9,0	0/1:44,1:24:6.51:7,0,224	0/1:35,2:22:16.24:16,0,52	1/1:4,17:22:23.41:324,23,0	1/1:2,17:19:50.70:372,51,0	0/1:6,10:16:57.70:123,0,58	0/0:20,2:22:3.91:0,4,326	1/1:4,5:9:2.05:111,2,0	0/1:2,15:17:10.65:259,0,11	1/1:6,15:21:23:300,23,0	1/1:4,12:16:26.69:214,27,0	1/1:4,11:16:22.90:159,23,0	1/1:2,11:13:23.85:175,24,0	1/1:4,18:22:50.70:372,51,0	1/1:1,15:16:41.58:306,42,0	1/1:3,22:26:58.70:422,59,0	1/1:3,18:22:43.75:312,44,0	1/1:6,17:23:40.03:354,40,0	1/1:3,14:17:9.54:232,10,0	1/1:2,10:12:26.84:197,27,0	1/1:4,13:18:40.79:290,41,0	1/1:4,11:17:36.83:252,37,0	1/1:1,10:11:26.84:197,27,0	1/1:2,19:21:25.38:287,25,0	1/1:4,19:25:38.28:402,38,0	1/1:7,24:32:65.10:466,65,0	1/1:1,8:9:4.06:152,4,0
chr10	20426558	.	ATG	A	2921.94	PASS	AB=0.927;AC=13;AF=0.232;AN=56;BaseQRankSum=10.645;DP=828;FS=5.525;HRun=0;HaplotypeScore=103.0768;InbreedingCoeff=0.6583;MQ=61.92;MQ0=6;MQRankSum=-0.798;QD=11.15;ReadPosRankSum=2.385;VQSLOD=3.2955;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:43,3:46:6.95:7,0,1345	0/0:18,1:19:8.71:0,9,608	0/0:42,0:33:50.84:0,51,737	0/0:50,0:39:48.22:0,48,760	0/0:20,0:20:45.15:0,45,717	0/0:36,1:37:40.65:0,41,1106	0/0:34,0:34:5.84:0,6,1086	0/0:33,0:33:69.23:0,69,1087	1/1:3,23:26:66.20:798,66,0	0/0:36,0:36:81.28:0,81,1307	0/0:15,0:15:36.12:0,36,581	0/0:29,1:30:35.83:0,36,1069	0/0:28,0:28:69.21:0,69,1083	0/0:32,0:32:71.76:0,72,1161	1/1:5,21:27:50.99:596,51,0	1/1:7,21:26:48.15:583,48,0	1/1:10,17:27:39.12:473,39,0	1/1:7,17:24:11.60:576,12,0	0/1:21,3:24:58.07:58,0,601	0/0:18,2:19:11.76:0,12,682	0/1:57,3:60:10.24:10,0,1773	0/0:18,0:18:42.13:0,42,653	0/0:16,1:17:11.75:0,12,689	0/0:38,1:39:59.91:0,60,1454	0/0:20,0:20:39.13:0,39,629	0/0:31,0:31:75.26:0,75,1201	0/0:26,0:26:63.20:0,63,990	0/0:17,1:18:5.73:0,6,570
chr10	20429072	.	TC	T	994.37	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.395;DP=743;FS=11.906;HRun=3;HaplotypeScore=116.7019;InbreedingCoeff=0.9998;MQ=90.94;MQ0=0;MQRankSum=0.061;QD=33.15;ReadPosRankSum=-4.303;VQSLOD=0.9423;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,99,1418	0/0:13,0:13:39.13:0,39,561	0/0:31,0:31:92.39:0,92,1228	0/0:29,0:29:80.01:0,80,1058	0/0:18,0:18:54.18:0,54,775	0/0:25,0:25:72.24:0,72,1035	0/0:31,0:31:87.25:0,87,1226	1/1:0,30:30:90.26:1089,90,0	0/0:29,0:29:84.22:0,84,1144	0/0:21,0:21:63.21:0,63,897	0/0:15,0:15:42.14:0,42,596	0/0:28,0:28:81.26:0,81,1146	0/0:37,0:37:99:0,102,1467	0/0:27,0:27:81.27:0,81,1166	0/0:48,0:48:99:0,144,2051	0/0:21,0:21:63.21:0,63,907	0/0:21,0:21:60.19:0,60,837	0/0:26,0:26:72.18:0,72,994	0/0:26,0:26:75.21:0,75,1055	0/0:24,0:24:69.23:0,69,993	0/0:32,0:32:90.30:0,90,1295	0/0:23,0:23:69.23:0,69,992	0/0:13,0:13:39.13:0,39,558	0/0:34,0:33:99:0,99,1425	0/0:21,0:21:63.19:0,63,887	0/0:35,0:35:99:0,105,1508	0/0:29,0:28:84.27:0,84,1192	0/0:20,0:20:54.18:0,54,777
chr10	20429600	.	C	CG	6083.56	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-15.353;DP=663;FS=0.714;HRun=2;HaplotypeScore=65.8267;InbreedingCoeff=0.9977;MQ=83.89;MQ0=0;MQRankSum=-2.159;QD=37.55;ReadPosRankSum=3.368;VQSLOD=5.4983;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,147,1780	0/0:8,0:8:24.08:0,24,297	0/0:20,0:20:48.12:0,48,561	0/0:18,0:18:45.10:0,45,520	0/0:13,0:13:36.10:0,36,431	0/0:21,0:21:63.18:0,63,767	0/0:28,0:28:78.19:0,78,935	1/1:4,28:32:81.25:1129,81,0	1/1:0,20:20:51.17:734,51,0	0/0:19,0:19:51.16:0,51,630	0/0:10,0:10:30.09:0,30,367	0/0:38,0:38:99:0,108,1307	0/0:31,0:31:93.28:0,93,1138	0/0:29,0:29:72.23:0,72,892	1/1:0,28:28:72.24:1036,72,0	1/1:0,18:18:48.16:691,48,0	1/1:2,35:37:99:1458,102,0	1/1:1,26:27:72.24:1036,72,0	0/0:14,0:14:36.10:0,36,432	0/0:15,0:15:45.14:0,45,557	0/0:46,0:46:99:0,126,1546	0/0:17,0:17:48.15:0,48,594	0/0:18,0:18:48.15:0,48,594	0/0:45,0:45:99:0,135,1637	0/0:12,0:12:30.09:0,30,372	0/0:30,0:30:84.25:0,84,1028	0/0:12,0:12:36.11:0,36,446	0/0:7,0:7:18.06:0,18,223
chr10	20430613	.	CT	C	11812.44	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-10.827;DP=734;FS=6.090;HRun=1;HaplotypeScore=101.8584;InbreedingCoeff=1.0000;MQ=83.90;MQ0=0;MQRankSum=-2.316;QD=36.35;ReadPosRankSum=3.641;VQSLOD=4.9059;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,150,2335	0/0:12,0:12:36.12:0,36,573	0/0:24,0:24:65.29:0,65,1062	0/0:21,0:21:57.22:0,57,798	0/0:32,0:32:96.31:0,96,1507	1/1:0,26:26:69.23:965,69,0	1/1:0,28:28:72.24:1007,72,0	0/0:32,0:32:93.30:0,93,1439	0/0:25,0:25:72.23:0,72,1127	1/1:0,25:25:75.25:1043,75,0	1/1:0,21:21:60.20:839,60,0	1/1:0,29:29:66.22:916,66,0	1/1:0,25:25:69.23:963,69,0	1/1:0,28:28:63.21:881,63,0	0/0:31,0:31:93.27:0,93,1456	0/0:35,0:35:99:0,105,1646	0/0:36,0:36:99:0,108,1690	0/0:24,0:24:72.18:0,72,1097	1/1:0,14:14:42.10:543,42,0	1/1:0,17:17:46.40:631,46,0	1/1:0,31:31:78.26:1090,78,0	1/1:0,34:34:81.27:1133,81,0	1/1:0,20:20:54.16:754,54,0	1/1:0,27:27:75.25:1049,75,0	0/0:27,0:27:81.28:0,81,1290	0/0:17,0:17:51.17:0,51,815	0/0:27,0:27:81.26:0,81,1256	0/0:16,0:16:48.16:0,48,767
chr10	20431372	.	C	CATGTATGT	15327.36	PASS	AC=52;AF=0.963;AN=54;BaseQRankSum=-1.891;DP=599;FS=2.948;HRun=0;HaplotypeScore=170.6635;InbreedingCoeff=0.2723;MQ=48.98;MQ0=7;MQRankSum=1.612;QD=26.43;ReadPosRankSum=-0.412;VQSLOD=4.4077;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:39:1.59:162,2,0	1/1:14,0:14:8.85:172,9,0	0/0:12,0:2:2.66:0,3,11	./.	1/1:33,0:33:18.03:254,18,0	1/1:11,11:22:15.05:611,15,0	1/1:6,6:13:12.04:408,12,0	1/1:47,0:46:45.13:881,45,0	1/1:8,7:15:24.08:952,24,0	1/1:17,0:30:45.13:1164,45,0	1/1:4,1:15:9.03:298,9,0	1/1:10,15:27:33.11:1342,33,0	1/1:5,9:14:24.08:969,24,0	1/1:9,7:17:18.06:726,18,0	1/1:5,0:23:35.92:294,36,0	1/1:13,12:26:45.15:1805,45,0	1/1:13,0:19:8.94:307,9,0	1/1:15,6:22:12.04:491,12,0	1/1:19,5:20:15.05:415,15,0	1/1:11,16:27:12.04:477,12,0	1/1:14,0:14:6.02:167,6,0	1/1:4,10:14:18.06:729,18,0	1/1:5,8:13:5.43:219,5,0	1/1:7,4:12:2.26:118,2,0	1/1:15,0:37:12.04:365,12,0	1/1:24,0:24:60.19:1255,60,0	1/1:11,0:26:20.86:664,21,0	1/1:12,0:12:3.01:82,3,0
chr10	20432324	.	GGGT	G	7097.13	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=12.345;DP=816;FS=0.000;HRun=0;HaplotypeScore=128.4002;InbreedingCoeff=0.9999;MQ=81.68;MQ0=0;MQRankSum=-4.353;QD=40.10;ReadPosRankSum=2.082;VQSLOD=5.5171;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:88,0:88:99:0,256,5659	0/0:10,0:10:30.03:0,30,617	0/0:24,0:24:51.62:0,52,1138	0/0:26,0:26:72.67:0,73,1477	0/0:30,0:30:87.30:0,87,1891	0/0:22,0:22:63.22:0,63,1409	0/0:33,0:33:96.30:0,96,2165	1/1:3,32:35:90.29:1497,90,0	1/1:1,22:23:62.95:1035,63,0	0/0:30,0:30:87.30:0,87,1970	0/0:16,0:16:45.15:0,45,1030	0/0:39,0:39:99:0,117,2673	0/0:34,0:34:96.33:0,96,2167	0/0:33,0:33:93.25:0,93,2030	1/1:0,23:23:63.21:1042,63,0	1/1:2,28:30:63.21:1060,63,0	1/1:2,39:41:86.75:1451,87,0	1/1:2,23:25:60.20:1012,60,0	0/0:27,0:27:75.26:0,75,1651	0/0:27,0:27:81.26:0,81,1733	0/0:37,0:37:99:0,111,2504	0/0:28,0:28:78.24:0,78,1674	0/0:24,0:24:60.10:0,60,1274	0/0:35,0:35:99:0,105,2349	0/0:18,0:18:51.18:0,51,1141	0/0:20,0:20:54.19:0,54,1213	0/0:24,0:24:69.22:0,69,1502	0/0:14,0:14:39.13:0,39,881
chr10	20432988	.	AG	A	11892.01	PASS	AB=0.516;AC=25;AF=0.446;AN=56;BaseQRankSum=17.344;DP=627;FS=3.861;HRun=1;HaplotypeScore=85.9185;InbreedingCoeff=0.9345;MQ=91.74;MQ0=0;MQRankSum=-3.500;QD=39.12;ReadPosRankSum=2.857;VQSLOD=5.5718;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,38:38:96.79:1342,97,0	1/1:0,8:8:21.07:293,21,0	0/0:26,0:26:72.24:0,72,1130	0/0:24,0:24:69.17:0,69,1061	1/1:0,15:15:45.11:607,45,0	0/0:22,0:21:63.19:0,63,969	0/0:28,0:28:84.27:0,84,1312	1/1:0,28:28:84.27:1158,84,0	1/1:0,22:22:63.21:881,63,0	0/0:8,0:8:21.07:0,21,335	0/0:13,0:13:39.12:0,39,601	0/0:28,0:28:84.27:0,84,1316	0/0:23,0:23:69.24:0,69,1102	0/0:29,0:29:78.27:0,78,1243	1/1:0,36:36:99:1510,108,0	1/1:0,26:26:78.26:1091,78,0	1/1:0,37:37:99:1510,108,0	1/1:0,36:36:96.32:1334,96,0	0/0:14,0:14:42.14:0,42,671	0/0:19,0:19:57.19:0,57,911	0/0:38,0:38:99:0,111,1709	0/0:10,0:10:30.10:0,30,470	0/0:12,0:12:33.11:0,33,527	0/0:29,0:29:87.30:0,87,1374	1/1:0,9:9:24.08:336,24,0	0/1:1,15:16:8.84:464,0,9	1/1:0,24:24:72.22:988,72,0	1/1:0,9:9:27.09:377,27,0
chr10	20434222	.	C	CTGGG	567.02	PASS	AC=10;AF=0.200;AN=50;BaseQRankSum=-2.007;DP=167;FS=2.389;HRun=0;HaplotypeScore=32.6581;InbreedingCoeff=0.5046;MQ=92.70;MQ0=3;MQRankSum=-1.719;QD=28.35;ReadPosRankSum=-1.307;VQSLOD=3.0481;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:8:9.03:0,9,150	0/0:3,0:3:6.02:0,6,100	0/0:10,0:6:2.50:0,2,9	0/0:23,0:12:6.01:0,6,78	0/0:6,0:6:3.01:0,3,50	0/0:6,0:6:12.04:0,12,200	0/0:4,0:4:3.01:0,3,50	0/0:7,0:7:9.03:0,9,150	1/1:2,0:2:6.02:113,6,0	0/0:5,0:5:11.84:0,12,200	0/0:7,0:7:6.01:0,6,76	0/0:4,0:4:9.03:0,9,150	0/0:11,0:11:9.03:0,9,150	0/0:11,0:11:12.04:0,12,200	1/1:3,2:5:9.03:219,9,0	1/1:2,2:4:6.02:148,6,0	1/1:5,2:7:6.02:148,6,0	1/1:1,1:2:3.01:74,3,0	./.	0/0:6,0:6:6.02:0,6,100	0/0:5,0:5:6.02:0,6,100	0/0:1,0:1:3.01:0,3,50	./.	0/0:3,0:3:9.03:0,9,150	0/0:6,0:6:3.01:0,3,50	0/0:5,0:5:6.02:0,6,100	0/0:7,0:7:12.04:0,12,200	./.
chr10	20434247	.	C	CCA	433.70	PASS	AB=0.811;AC=19;AF=0.500;AN=38;BaseQRankSum=-4.124;DP=250;FS=4.028;HRun=0;HaplotypeScore=40.1494;InbreedingCoeff=0.3022;MQ=56.92;MQ0=19;MQRankSum=1.811;QD=4.43;ReadPosRankSum=-0.546;VQSLOD=1.7245;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:10:2.71:0,3,14	0/0:4,0:4:0:0,0,0	./.	0/0:36,0:4:2.22:0,2,7	./.	1/1:9,0:8:6.02:83,6,0	0/1:5,0:5:0.01:0,0,0	./.	0/0:4,0:5:2.84:0,3,14	1/1:7,0:7:3.01:42,3,0	1/1:2,1:3:3.01:44,3,0	1/1:9,2:11:6.02:88,6,0	1/1:7,3:9:3.01:44,3,0	0/1:7,5:12:5.08:79,0,5	0/0:4,0:9:10.85:0,11,49	0/0:3,0:6:8.28:0,8,38	0/0:4,0:8:5.52:0,6,27	0/0:2,0:3:2.84:0,3,14	./.	./.	0/1:13,7:21:25.24:39,0,25	1/1:4,2:6:3.01:44,3,0	1/1:1,2:3:3.01:44,3,0	1/1:6,2:8:2.77:44,3,0	./.	./.	./.	./.
chr10	20434463	.	CA	C	5110.59	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=15.192;DP=760;FS=1.539;HRun=2;HaplotypeScore=93.8352;InbreedingCoeff=0.9799;MQ=84.34;MQ0=0;MQRankSum=-3.403;QD=36.25;ReadPosRankSum=3.480;VQSLOD=5.2730;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,49:49:99:1729,135,0	1/1:0,11:11:33.11:427,33,0	0/0:26,0:26:71.19:0,71,1071	0/0:30,0:30:81.23:0,81,1170	1/1:1,25:26:72.19:912,72,0	0/0:18,0:18:48.08:0,48,668	0/0:34,0:34:99:0,102,1484	0/0:32,0:32:58.33:0,58,400	0/0:23,0:23:69.17:0,69,984	0/0:21,0:21:60.19:0,60,863	0/0:8,0:8:21.03:0,21,289	0/0:21,0:21:63.20:0,63,923	0/0:32,0:32:93.32:0,93,1392	0/0:35,0:35:99:0,102,1487	0/0:43,0:43:99:0,123,1705	0/0:43,0:43:99:0,123,1795	0/0:42,0:42:99:0,120,1726	0/0:30,0:30:90.24:0,90,1300	0/0:31,0:31:93.28:0,93,1322	0/0:18,0:18:54.15:0,54,783	0/0:51,0:51:99:0,150,2201	0/0:20,0:20:57.19:0,57,843	0/0:20,0:20:54.03:0,54,705	0/0:41,0:41:99:0,117,1652	1/1:0,11:11:33.11:427,33,0	1/1:0,21:21:63.18:801,63,0	1/1:0,21:21:57.19:738,57,0	1/1:0,2:2:6.02:78,6,0
chr10	20441848	.	G	GGTTTGTTTGTTT	36470.03	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-0.924;DP=769;FS=6.068;HRun=0;HaplotypeScore=226.9527;InbreedingCoeff=0.9900;MQ=64.31;MQ0=0;MQRankSum=-15.898;QD=73.68;ReadPosRankSum=-0.915;VQSLOD=3.9979;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:90.30:0,90,2912	0/0:14,0:14:36.12:0,36,1060	0/0:38,0:34:42.12:0,42,823	0/0:28,0:22:41.87:0,42,969	0/0:24,0:24:51.17:0,51,1505	1/1:9,22:35:66.23:3586,66,0	1/1:21,10:32:54.18:2830,54,0	0/0:36,0:36:49.22:0,49,1789	1/1:7,0:24:45.15:2149,45,0	1/1:12,25:39:87.76:3611,88,0	1/1:7,10:20:15.05:884,15,0	1/1:10,13:24:45.15:1886,45,0	1/1:16,22:38:81.28:4711,81,0	1/1:10,11:25:36.09:1973,36,0	1/1:11,0:26:24.08:1244,24,0	1/1:16,0:44:57.20:2774,57,0	1/1:14,0:34:39.13:1597,39,0	1/1:22,0:21:30.10:1046,30,0	1/1:14,9:23:39.13:1760,39,0	1/1:10,11:21:33.11:1516,33,0	1/1:10,6:16:12.04:457,12,0	1/1:12,12:24:30.10:1346,30,0	1/1:7,13:21:33.11:1743,33,0	1/1:10,14:26:27.09:1354,27,0	0/0:22,0:22:54.19:0,54,1602	0/0:38,0:37:87.29:0,87,2601	0/0:28,0:27:72.25:0,72,2170	0/0:7,0:7:15.05:0,15,417
chr10	20441867	.	T	TTG	2698.18	PASS	AB=0.984;AC=18;AF=0.321;AN=56;BaseQRankSum=17.494;DP=721;FS=28.040;HRun=0;HaplotypeScore=180.1054;InbreedingCoeff=-0.4748;MQ=64.91;MQ0=1;MQRankSum=-15.192;QD=6.23;ReadPosRankSum=5.261;VQSLOD=1.7238;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,132,1997	0/0:15,0:15:42.14:0,42,641	0/0:38,0:30:81.26:0,81,1162	0/0:35,0:29:76.06:0,76,1028	0/0:23,0:23:66.22:0,66,989	0/1:34,0:34:99:283,0,312	0/1:30,0:30:54.66:55,0,826	0/0:32,0:32:93.30:0,93,1383	0/1:18,0:18:30.28:30,0,319	0/1:41,0:41:99:531,0,569	0/1:16,0:16:41.08:41,0,285	0/1:32,0:32:83.36:83,0,743	0/1:31,0:32:99:374,0,318	0/1:23,0:23:99:144,0,228	0/1:17,0:17:59.65:60,0,453	0/1:29,0:29:99:177,0,517	0/1:23,0:22:99:156,0,442	0/1:16,9:24:99:287,0,402	0/1:18,0:18:95.70:96,0,445	0/1:19,0:19:62.43:62,0,409	0/1:17,0:17:55.75:56,0,402	0/1:22,0:22:99:175,0,187	0/1:18,0:18:99:157,0,231	0/1:19,0:19:92.61:93,0,197	0/0:20,0:20:60.20:0,60,917	0/0:39,0:38:99:0,111,1655	0/0:35,0:34:99:0,102,1535	0/0:7,0:7:15.05:0,15,230
chr10	20443069	.	GCACACA	G	4461.45	PASS	AB=0.862;AC=24;AF=0.444;AN=54;BaseQRankSum=2.339;DP=646;FS=17.487;HRun=0;HaplotypeScore=156.7888;InbreedingCoeff=0.3724;MQ=61.47;MQ0=16;MQRankSum=-0.438;QD=13.36;ReadPosRankSum=2.133;VQSLOD=2.9199;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:36:23.36:0,23,748	0/0:9,0:9:14.97:0,15,294	0/0:39,0:22:3.01:0,3,42	./.	0/1:24,0:24:3.46:3,0,523	0/0:8,15:22:2.97:0,3,20	1/1:33,0:36:47.12:839,47,0	0/0:36,0:33:42.10:0,42,765	1/1:12,0:20:3.01:42,3,0	1/1:19,0:18:30.06:556,30,0	0/0:8,5:13:0:0,0,0	0/1:11,18:30:14.50:64,0,15	1/1:14,0:16:1.65:406,2,0	1/1:21,0:21:26.64:429,27,0	0/0:7,0:19:5.62:0,6,40	1/1:9,0:17:21.96:319,22,0	0/1:16,0:21:0.10:225,0,0	0/1:13,0:16:20.07:231,0,20	0/1:8,0:10:43.97:317,0,44	1/1:12,9:22:6.02:111,6,0	0/0:16,0:30:3:0,3,29	1/1:28,0:28:1.63:20,2,0	0/0:14,7:21:2.88:0,3,15	1/1:25,0:30:19.94:859,20,0	0/0:22,0:22:38.78:0,39,757	0/1:20,0:19:41.28:41,0,645	0/0:17,0:17:30.49:0,30,652	0/0:13,0:12:33.01:0,33,577
chr10	20443097	.	ACACACACTCTCT	A	6170.85	PASS	AB=0.964;AC=35;AF=0.648;AN=54;BaseQRankSum=4.231;DP=636;FS=0.464;HRun=0;HaplotypeScore=177.6949;InbreedingCoeff=0.0795;MQ=47.43;MQ0=47;MQRankSum=2.940;QD=11.32;ReadPosRankSum=0.051;VQSLOD=3.8456;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:36,0:34:99:111,0,773	0/1:7,0:7:18.76:19,0,293	0/0:4,0:1:3.01:0,3,42	./.	0/1:23,0:23:3.78:4,0,566	0/1:23,0:22:26.82:27,0,28	0/1:42,0:38:32:786,0,32	0/0:42,0:38:60.02:0,60,948	0/1:21,0:20:14.25:242,0,14	1/1:7,0:15:29.60:532,30,0	1/1:11,0:10:2.62:59,3,0	1/1:29,0:28:20.80:216,21,0	1/1:21,0:21:18.50:647,19,0	1/1:29,0:27:27.23:486,27,0	1/1:24,0:20:11.33:146,11,0	1/1:23,0:19:24.81:368,25,0	0/1:24,0:23:1.15:213,0,1	1/1:17,0:17:12.90:406,13,0	0/1:23,0:19:33.38:440,0,33	1/1:20,0:16:9.50:169,10,0	1/1:31,0:26:6.02:94,6,0	0/1:10,19:29:10.23:15,0,10	1/1:18,0:16:5.50:95,6,0	1/1:30,0:28:50.58:917,51,0	0/0:22,0:22:38.79:0,39,799	0/1:24,0:22:99:127,0,750	0/1:23,0:22:51.57:52,0,657	0/0:17,0:14:34.26:0,34,580
chr10	20443103	.	ACTCTCT	A	2067.23	PASS	AB=0.949;AC=35;AF=0.700;AN=50;BaseQRankSum=-0.357;DP=623;FS=3.486;HRun=0;HaplotypeScore=161.2232;InbreedingCoeff=0.1843;MQ=47.02;MQ0=53;MQRankSum=1.965;QD=4.61;ReadPosRankSum=1.224;VQSLOD=2.4558;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:31:15.04:140,0,15	1/1:7,0:7:3.01:37,3,0	./.	./.	0/1:25,0:23:0:0,0,0	0/1:23,0:21:11.30:30,0,11	0/0:28,14:38:6.01:0,6,87	0/0:41,0:37:2.94:0,3,18	1/1:19,0:20:1.55:253,2,0	1/1:18,0:15:1.97:9,2,0	1/1:12,0:11:3.01:59,3,0	1/1:29,0:29:14.65:152,15,0	1/1:17,0:19:19.56:274,20,0	1/1:18,0:26:0.31:55,0,0	1/1:24,1:22:14.81:217,15,0	1/1:15,7:19:2.85:54,3,0	0/0:14,12:24:0.89:0,1,3	1/1:16,0:17:16.96:216,17,0	1/1:26,0:21:9.15:144,9,0	1/1:19,0:15:3.01:59,3,0	1/1:30,0:25:6.02:95,6,0	0/0:29,0:29:2.88:0,3,15	1/1:17,1:16:5.99:106,6,0	0/1:22,0:28:5.48:92,0,5	./.	0/1:20,0:19:4.73:111,0,5	1/1:14,0:19:6.02:92,6,0	0/0:18,0:14:1.25:0,1,3
chr10	20445632	.	AGT	A	8640.72	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=14.427;DP=780;FS=0.625;HRun=0;HaplotypeScore=98.5005;InbreedingCoeff=0.9964;MQ=75.28;MQ0=3;MQRankSum=0.101;QD=25.12;ReadPosRankSum=2.415;VQSLOD=5.3921;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:72.18:0,72,1161	0/0:14,0:14:39.13:0,39,629	0/0:40,1:36:13.38:0,13,565	0/0:44,0:35:49.56:0,50,830	0/0:29,0:29:81.27:0,81,1300	1/1:3,25:27:63.09:755,63,0	1/1:6,27:33:67.76:816,68,0	0/0:33,0:33:68.71:0,69,1036	0/0:28,1:29:38.32:0,38,1115	1/1:8,21:29:63.16:748,63,0	1/1:4,10:14:27.08:332,27,0	1/1:9,18:28:50.99:605,51,0	1/1:6,15:21:39.12:480,39,0	1/1:3,29:32:66.20:807,66,0	0/0:23,0:23:57.19:0,57,924	0/0:31,1:32:53.35:0,53,1355	0/0:28,0:28:78.24:0,78,1241	0/0:28,0:28:77.85:0,78,1176	1/1:7,12:19:36.11:442,36,0	1/1:9,32:41:90.28:1108,90,0	1/1:5,23:28:63.20:776,63,0	1/1:2,17:19:39.12:480,39,0	1/1:2,22:24:48.15:591,48,0	1/1:4,24:28:57.07:702,57,0	0/0:30,1:31:30.52:0,31,1173	0/0:30,0:30:41.32:0,41,1162	0/0:29,0:29:78.23:0,78,1204	0/0:16,0:16:27.09:0,27,440
chr10	20446372	.	TGA	T	4299.01	PASS	AC=50;AF=0.926;AN=54;BaseQRankSum=1.274;DP=258;FS=0.000;HRun=0;HaplotypeScore=102.3250;InbreedingCoeff=0.4165;MQ=55.07;MQ0=3;MQRankSum=-2.950;QD=18.29;ReadPosRankSum=1.754;VQSLOD=4.9931;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:4:8.98:72,9,0	1/1:3,0:3:5.99:50,6,0	0/0:4,0:4:5.15:0,5,68	0/0:9,0:3:0.47:0,0,1	1/1:5,0:5:11.99:100,12,0	1/1:9,2:11:17.88:143,18,0	1/1:10,0:10:20.92:167,21,0	1/1:12,0:11:33.02:299,33,0	1/1:1,0:1:2.99:24,3,0	1/1:13,4:17:41.86:362,42,0	1/1:14,3:17:38.61:294,39,0	1/1:5,6:11:23.98:223,24,0	1/1:8,8:16:44.75:376,45,0	1/1:12,3:15:29.93:255,30,0	1/1:7,0:7:3:25,3,0	1/1:4,0:4:11.93:93,12,0	./.	1/1:8,0:8:23.76:166,24,0	1/1:12,2:14:38.77:309,39,0	1/1:15,6:21:53.50:416,54,0	1/1:8,0:8:11.98:99,12,0	1/1:7,4:11:26.85:226,27,0	1/1:16,2:18:32.54:239,33,0	1/1:2,2:4:6.01:59,6,0	1/1:3,0:3:6:51,6,0	1/1:8,0:8:18:156,18,0	1/1:3,0:3:5.99:48,6,0	1/1:4,0:4:5.99:48,6,0
chr10	20446373	.	GAGATATATATAT	G	7228.11	PASS	AB=1.000;AC=47;AF=0.870;AN=54;BaseQRankSum=0.841;DP=250;FS=1.755;HRun=0;HaplotypeScore=132.4944;InbreedingCoeff=0.4443;MQ=55.00;MQ0=3;MQRankSum=-2.187;QD=32.12;ReadPosRankSum=0.331;VQSLOD=4.0647;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:4:8.98:72,9,0	1/1:3,0:3:5.99:50,6,0	0/0:4,0:4:5.15:0,5,68	0/0:9,0:3:0.47:0,0,1	1/1:5,0:5:11.99:100,12,0	1/1:11,0:11:17.89:282,18,0	1/1:9,0:9:20.92:167,21,0	1/1:12,0:11:33.02:299,33,0	1/1:1,0:1:2.99:24,3,0	1/1:15,0:15:41.88:640,42,0	1/1:17,0:17:38.62:503,39,0	1/1:11,0:11:24.01:641,24,0	1/1:16,0:16:44.79:935,45,0	1/1:15,0:15:29.95:464,30,0	1/1:1,6:7:3.01:114,3,0	1/1:4,0:4:11.93:93,12,0	./.	1/1:8,0:8:23.76:166,24,0	1/1:14,0:14:38.78:449,39,0	1/1:21,0:21:53.53:835,54,0	1/1:7,0:7:11.98:99,12,0	1/1:10,0:10:26.88:506,27,0	1/1:17,0:17:32.55:378,33,0	1/1:4,0:4:6.02:199,6,0	1/1:3,0:3:6:51,6,0	0/1:8,0:8:29.86:115,0,30	1/1:3,0:3:5.99:48,6,0	0/0:2,0:2:6.02:0,6,183
chr10	20446389	.	TATATATATATATATATATATATATATA	T	8779.63	PASS	AC=22;AF=0.579;AN=38;BaseQRankSum=6.393;DP=104;FS=2.187;HRun=0;HaplotypeScore=101.5178;InbreedingCoeff=0.7381;MQ=46.03;MQ0=7;MQRankSum=-3.275;QD=165.65;ReadPosRankSum=3.615;VQSLOD=4.6685;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:2,0:1:3.01:0,3,301	./.	./.	./.	./.	1/1:1,2:3:8.99:429,9,0	./.	0/0:5,0:3:9.02:0,9,356	./.	1/1:2,4:5:15.04:848,15,0	1/1:0,3:3:9.03:613,9,0	1/1:1,6:7:19.88:1233,20,0	1/1:2,7:9:26.45:1642,26,0	1/1:3,3:6:17.63:678,18,0	0/0:4,0:4:3.01:0,3,111	0/0:5,0:5:15.05:0,15,386	0/0:12,0:11:6.02:0,6,238	0/0:5,0:5:15.05:0,15,898	1/1:1,1:2:6.02:411,6,0	1/1:1,6:7:21.06:1255,21,0	./.	1/1:0,4:4:12.04:818,12,0	1/1:2,2:4:11.24:443,11,0	1/1:0,2:2:6.02:409,6,0	./.	0/0:1,0:1:3.01:0,3,257	./.	0/0:2,0:2:6.02:0,6,654
chr10	20446415	.	TA	T	1447.94	PASS	AC=26;AF=0.500;AN=52;BaseQRankSum=9.092;DP=211;FS=84.539;HRun=1;HaplotypeScore=102.7748;InbreedingCoeff=0.7658;MQ=47.30;MQ0=14;MQRankSum=-8.403;QD=10.73;ReadPosRankSum=6.687;VQSLOD=-0.2537;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:7:21.04:0,21,238	./.	0/0:2,0:2:2.94:0,3,18	0/0:6,0:2:3.01:0,3,33	0/0:4,0:4:12.02:0,12,136	1/1:2,6:8:8.93:63,9,0	1/1:0,5:5:5.93:40,6,0	0/0:12,0:11:32.84:0,33,389	0/0:1,0:1:3.01:0,3,38	1/1:5,10:13:39.01:404,39,0	1/1:3,12:14:17.84:123,18,0	1/1:7,8:12:23.85:171,24,0	1/1:8,9:13:26.79:190,27,0	1/1:3,3:6:11.91:84,12,0	0/0:4,0:4:11.05:0,11,105	0/0:6,0:6:18.04:0,18,213	0/0:18,0:17:33.08:0,33,399	0/0:8,0:8:21.07:0,21,264	1/1:6,0:6:17.97:170,18,0	1/1:6,12:17:23.82:169,24,0	1/1:0,4:4:2.97:20,3,0	1/1:4,4:8:17.84:125,18,0	1/1:9,0:9:2.01:37,2,0	1/1:3,6:8:6.90:45,7,0	0/0:1,0:1:3.01:0,3,38	./.	0/0:3,0:3:9.03:0,9,108	0/0:4,0:4:9.03:0,9,114
chr10	20446419	.	TA	T	1631	PASS	AC=26;AF=0.481;AN=54;BaseQRankSum=9.257;DP=235;FS=104.598;HRun=1;HaplotypeScore=103.3169;InbreedingCoeff=0.7714;MQ=48.74;MQ0=14;MQRankSum=-8.790;QD=11.02;ReadPosRankSum=5.148;VQSLOD=0.4148;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:27.07:0,27,317	0/0:1,0:1:3.01:0,3,37	0/0:2,0:2:3.01:0,3,33	0/0:6,0:2:3.01:0,3,37	0/0:4,0:4:12.04:0,12,146	1/1:9,0:9:7.07:81,7,0	1/1:6,0:6:6.41:41,6,0	0/0:13,0:12:33.10:0,33,403	0/0:1,0:1:3.01:0,3,37	1/1:18,0:16:40.43:398,40,0	1/1:16,0:15:21.27:148,21,0	1/1:15,0:12:23.89:171,24,0	1/1:18,0:14:28.08:199,28,0	1/1:6,0:6:11.92:86,12,0	0/0:7,0:7:20.65:0,21,230	0/0:7,0:7:21.07:0,21,255	0/0:20,0:19:39.12:0,39,469	0/0:9,0:9:24.03:0,24,276	1/1:2,5:7:20.97:196,21,0	1/1:20,0:19:32.41:260,32,0	1/1:5,0:5:2.97:20,3,0	1/1:9,0:9:18.33:128,18,0	1/1:10,0:10:8.80:57,9,0	1/1:9,0:8:6.54:45,7,0	0/0:1,0:1:3.01:0,3,37	./.	0/0:4,0:4:12.04:0,12,145	0/0:3,0:3:6.02:0,6,73
chr10	20446420	.	A	ATTTTT	5092.03	PASS	AC=26;AF=0.481;AN=54;BaseQRankSum=6.541;DP=249;FS=66.547;HRun=2;HaplotypeScore=104.8986;InbreedingCoeff=0.8317;MQ=48.55;MQ0=14;MQRankSum=-9.485;QD=32.03;ReadPosRankSum=1.911;VQSLOD=-0.3568;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:27.08:0,27,503	0/0:1,0:1:3.01:0,3,50	0/0:3,0:3:3.01:0,3,60	0/0:6,0:2:3.01:0,3,62	0/0:5,0:5:12.04:0,12,245	1/1:10,0:10:26.99:318,27,0	1/1:7,0:7:21.02:285,21,0	0/0:13,0:12:33.07:0,33,668	0/0:2,0:2:3.01:0,3,62	1/1:18,0:16:48.02:903,48,0	1/1:16,0:15:41.92:536,42,0	1/1:16,0:13:35.84:400,36,0	1/1:18,0:14:41.74:431,42,0	1/1:6,0:6:17.92:199,18,0	0/0:7,0:7:21.07:0,21,385	0/0:7,0:7:21.06:0,21,385	0/0:20,0:19:39.10:0,39,727	0/0:9,0:9:24.04:0,24,448	1/1:11,0:11:33.02:575,33,0	1/1:20,0:19:56.92:695,57,0	1/1:5,0:5:9.03:140,9,0	1/1:10,0:10:29.88:369,30,0	1/1:3,8:12:11.88:136,12,0	1/1:10,0:9:11.71:106,12,0	0/0:1,0:1:3.01:0,3,62	./.	0/0:4,0:4:12.02:0,12,205	0/0:2,0:2:6.02:0,6,123
chr10	20447364	.	T	TCGGTCA	20461.10	PASS	AB=0.964;AC=27;AF=0.482;AN=56;BaseQRankSum=1.864;DP=719;FS=23.955;HRun=0;HaplotypeScore=155.2517;InbreedingCoeff=0.9270;MQ=65.30;MQ0=3;MQRankSum=-18.491;QD=58.13;ReadPosRankSum=0.659;VQSLOD=3.3603;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,117,2789	0/0:7,0:7:21.06:0,21,469	0/0:25,0:24:72.25:0,72,1638	0/0:33,0:33:87.27:0,87,1902	0/0:29,0:29:84.29:0,84,2063	1/1:3,15:18:48.16:1730,48,0	1/1:6,15:22:48.16:1643,48,0	0/0:27,0:27:78.25:0,78,1744	0/0:23,0:23:69.24:0,69,1672	1/1:9,20:31:75.25:2377,75,0	1/1:4,15:18:30.10:1091,30,0	1/1:6,25:30:69.19:2349,69,0	1/1:5,22:26:48.16:1621,48,0	1/1:3,22:29:60.20:2130,60,0	0/0:30,0:30:87.30:0,87,2098	0/0:21,0:21:63.21:0,63,1497	0/0:38,0:38:99:0,108,2586	0/0:27,0:27:78.27:0,78,1883	1/1:2,14:17:45.12:1338,45,0	1/1:3,10:18:21.07:765,21,0	1/1:11,12:24:30.10:1041,30,0	1/1:6,14:20:25.69:981,26,0	1/1:3,17:18:39.01:1385,39,0	1/1:7,22:30:37.48:1870,37,0	0/0:33,0:33:99:0,99,2359	0/1:26,1:27:99:140,0,1675	0/0:17,0:17:51.15:0,51,1158	0/0:13,0:13:39.13:0,39,960
chr10	20448225	.	GCCA	G	1045.15	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-0.230;DP=597;FS=3.888;HRun=0;HaplotypeScore=108.2800;InbreedingCoeff=0.9834;MQ=86.56;MQ0=0;MQRankSum=-2.743;QD=41.81;ReadPosRankSum=-3.284;VQSLOD=3.6376;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,114,2562	0/0:11,0:11:33.11:0,33,717	0/0:23,0:23:63.62:0,64,1313	0/0:22,0:22:54.02:0,54,1092	0/0:14,0:14:36.11:0,36,762	0/0:20,0:20:51.17:0,51,1111	0/0:30,0:30:87.28:0,87,1809	1/1:0,25:25:72.17:1140,72,0	0/0:15,0:15:45.13:0,45,943	0/0:11,0:11:33.11:0,33,715	0/0:6,0:6:15.04:0,15,291	0/0:30,0:30:87.24:0,87,1848	0/0:24,0:24:72.25:0,72,1524	0/0:19,0:19:57.20:0,57,1259	0/0:32,0:32:93.32:0,93,2091	0/0:20,0:20:54.19:0,54,1242	0/0:34,0:34:93.32:0,93,2138	0/0:27,0:27:81.28:0,81,1837	0/0:21,0:21:60.20:0,60,1289	0/0:14,0:14:41.81:0,42,815	0/0:25,0:25:72.23:0,72,1548	0/0:13,0:13:39.09:0,39,762	0/0:14,0:14:42.14:0,42,929	0/0:30,0:30:84.29:0,84,1833	0/0:16,0:16:45.15:0,45,948	0/0:23,0:23:60.21:0,60,1324	0/0:27,0:26:72.15:0,72,1535	0/0:11,0:11:33.11:0,33,760
chr10	20448376	.	TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	T	1118.90	PASS	AB=1.000;AC=9;AF=0.167;AN=54;BaseQRankSum=1.499;DP=427;FS=0.000;HRun=0;HaplotypeScore=248.9706;InbreedingCoeff=0.5964;MQ=46.18;MQ0=72;MQRankSum=-3.201;QD=23.31;ReadPosRankSum=-2.225;VQSLOD=2.1456;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:20:33.29:0,33,2700	0/0:9,0:9:20.36:0,20,1373	0/0:6,0:3:9.03:0,9,364	0/1:17,0:5:0.01:0,0,211	0/0:19,0:18:45.11:0,45,2740	0/0:19,0:14:14.78:0,15,656	0/0:21,0:16:27.55:0,28,1732	./.	0/0:13,0:13:33.11:0,33,2753	0/0:17,0:12:27.08:0,27,1759	0/0:22,0:21:9.06:0,9,1518	0/0:20,0:13:20.26:0,20,1037	0/0:20,0:19:36.58:0,37,2142	0/0:14,0:12:19.53:0,20,1467	1/1:4,0:2:6.02:118,6,0	1/1:1,3:3:9.03:796,9,0	0/1:3,0:1:0:0,0,0	1/1:4,1:1:3.01:267,3,0	0/0:20,0:14:36.17:0,36,2373	0/1:15,0:12:60.66:61,0,189	0/0:17,0:12:20.75:0,21,902	0/0:15,0:9:17.42:0,17,629	0/0:20,0:14:27.08:0,27,1692	0/0:24,0:21:29.20:0,29,1170	0/0:19,0:18:42.14:0,42,2824	0/0:25,0:23:69.24:0,69,5750	0/0:18,0:18:41.75:0,42,3575	0/0:19,0:8:24.06:0,24,1026
chr10	20448858	.	CA	C	8366.77	PASS	AC=38;AF=0.704;AN=54;BaseQRankSum=15.629;DP=630;FS=1.139;HRun=5;HaplotypeScore=95.0725;InbreedingCoeff=0.9828;MQ=67.33;MQ0=12;MQRankSum=-3.507;QD=20.41;ReadPosRankSum=-1.350;VQSLOD=3.7537;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,36:35:87.24:983,87,0	1/1:1,4:5:9.03:102,9,0	0/0:23,0:23:54.13:0,54,712	0/0:20,0:20:51.12:0,51,653	1/1:0,22:16:39.11:442,39,0	1/1:1,29:23:51.14:578,51,0	./.	0/0:34,0:34:96.30:0,96,1285	0/0:20,0:20:60.18:0,60,804	1/1:2,21:14:33.08:367,33,0	1/1:1,10:7:18.05:202,18,0	1/1:2,20:14:33.09:369,33,0	1/1:1,24:20:48.14:542,48,0	1/1:1,24:19:48.14:544,48,0	0/0:22,0:22:66.22:0,66,903	0/0:30,0:30:87.29:0,87,1183	0/0:30,0:30:81.27:0,81,1108	0/0:24,0:24:69.21:0,69,914	1/1:1,19:14:39.03:405,39,0	1/1:3,18:13:21.06:236,21,0	1/1:1,20:18:45.13:510,45,0	1/1:1,25:18:47.92:543,48,0	1/1:2,20:16:39.11:440,39,0	1/1:2,30:28:54.15:610,54,0	1/1:2,17:15:36.10:404,36,0	1/1:1,18:16:45.13:509,45,0	1/1:0,21:15:39.11:442,39,0	1/1:0,6:5:12.03:136,12,0
chr10	20449374	.	GT	G	4650.19	PASS	AB=1.000;AC=46;AF=0.821;AN=56;BaseQRankSum=6.524;DP=613;FS=1.238;HRun=10;HaplotypeScore=247.6279;InbreedingCoeff=0.4696;MQ=66.08;MQ0=0;MQRankSum=-6.478;QD=8.69;ReadPosRankSum=7.117;VQSLOD=0.5860;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:33,0:34:13.83:60,14,0	1/1:13,0:13:1.76:5,2,0	0/0:18,0:18:12.55:0,13,202	0/0:27,0:20:21.46:0,21,293	1/1:24,0:23:2.99:21,3,0	1/1:2,15:17:47.43:326,47,0	1/1:5,11:16:37.28:273,37,0	0/0:31,0:32:49.47:0,49,400	1/1:7,25:32:71.96:621,72,0	1/1:7,14:21:41.68:308,42,0	1/1:3,14:16:38.14:235,38,0	1/1:5,14:19:43.91:293,44,0	1/1:11,20:31:64.88:483,65,0	1/1:6,22:28:64.82:422,65,0	1/1:27,0:27:16.43:40,16,0	0/1:27,0:27:9.77:20,0,10	0/1:29,0:30:3.33:57,0,3	1/1:22,0:22:10.01:24,10,0	1/1:4,10:14:32.89:260,33,0	1/1:7,11:16:14.25:188,14,0	1/1:4,7:11:13.69:94,14,0	1/1:6,16:21:41.13:314,41,0	1/1:9,16:25:40.91:314,41,0	1/1:5,12:17:29.68:216,30,0	0/1:26,0:25:10.41:22,0,10	1/1:19,0:19:0.58:4,1,0	1/1:18,0:18:8.01:36,8,0	0/1:7,0:7:8.95:15,0,9
chr10	20449382	.	TTTG	T	8726.68	PASS	AB=1.000;AC=48;AF=0.857;AN=56;BaseQRankSum=3.847;DP=619;FS=6.086;HRun=0;HaplotypeScore=257.8336;InbreedingCoeff=0.7278;MQ=56.02;MQ0=1;MQRankSum=-8.233;QD=15.98;ReadPosRankSum=1.560;VQSLOD=3.6664;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:42,1:43:93.18:586,93,0	1/1:10,1:11:20.17:135,20,0	0/0:15,0:11:31.80:0,32,307	0/0:29,0:16:27.62:0,28,441	1/1:26,2:27:57.32:364,57,0	1/1:15,0:16:47.98:423,48,0	1/1:12,0:14:31.79:251,32,0	0/1:31,0:31:99:192,0,200	0/0:29,0:29:77.50:0,78,584	1/1:17,0:18:34.17:292,34,0	1/1:15,0:14:40.41:335,40,0	1/1:15,0:16:42.73:351,43,0	1/1:22,0:28:68.02:538,68,0	1/1:23,0:26:66.99:552,67,0	1/1:9,20:29:41.85:513,42,0	1/1:5,25:30:27.39:303,27,0	1/1:9,23:32:13.46:419,13,0	1/1:3,18:21:30.01:390,30,0	1/1:12,0:13:30.69:240,31,0	1/1:13,0:13:23.94:226,24,0	1/1:8,0:10:17.41:119,17,0	1/1:20,0:20:51.72:438,52,0	1/1:17,0:18:45.20:339,45,0	1/1:12,0:15:32.98:318,33,0	1/1:35,2:36:79.92:583,80,0	1/1:26,1:27:61.90:412,62,0	1/1:23,0:23:51.05:296,51,0	0/1:9,0:9:4.78:109,0,5
chr10	20449383	.	TTG	T	10675.96	PASS	AB=1.000;AC=49;AF=0.875;AN=56;BaseQRankSum=2.819;DP=612;FS=8.051;HRun=0;HaplotypeScore=238.6718;InbreedingCoeff=0.8204;MQ=55.94;MQ0=2;MQRankSum=-6.648;QD=19.88;ReadPosRankSum=0.592;VQSLOD=3.9171;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:30,12:42:99:1044,111,0	1/1:2,8:10:21.03:257,21,0	0/0:17,0:11:25.88:0,26,234	0/0:29,0:16:23.52:0,24,353	1/1:14,14:27:66:743,66,0	1/1:16,0:16:47.89:410,48,0	1/1:14,0:14:37.06:293,37,0	0/1:31,0:31:56.84:261,0,57	0/0:29,0:29:69.36:0,69,313	1/1:16,0:16:37.52:330,38,0	1/1:15,0:14:40.10:317,40,0	1/1:15,0:15:42.76:348,43,0	1/1:27,0:27:71.21:597,71,0	1/1:26,0:26:67.08:565,67,0	1/1:27,1:28:42.03:400,42,0	1/1:28,2:30:29.76:275,30,0	1/1:31,0:32:24.25:316,24,0	1/1:21,0:21:30:275,30,0	1/1:12,0:12:31.31:294,31,0	1/1:14,0:12:22.45:220,22,0	1/1:9,0:9:15.87:138,16,0	1/1:22,0:20:50.95:423,51,0	1/1:18,0:18:45.12:373,45,0	1/1:15,0:15:32.05:291,32,0	1/1:24,13:36:90.46:976,90,0	1/1:19,8:27:70.37:698,70,0	1/1:21,2:23:63.95:595,64,0	1/1:6,3:9:11.96:238,12,0
chr10	20449384	.	TG	T	8203.25	PASS	AB=1.000;AC=51;AF=0.911;AN=56;BaseQRankSum=1.006;DP=611;FS=1.647;HRun=1;HaplotypeScore=237.7686;InbreedingCoeff=0.7617;MQ=55.82;MQ0=4;MQRankSum=-5.767;QD=14.57;ReadPosRankSum=2.551;VQSLOD=4.8275;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:36,6:42:99:954,116,0	1/1:10,0:10:20.92:161,21,0	0/0:17,1:11:15.96:0,16,147	0/0:29,1:16:20.98:0,21,277	1/1:27,1:27:65.81:548,66,0	1/1:16,0:16:46.40:261,46,0	1/1:14,0:14:32.97:176,33,0	1/1:31,0:31:13.24:420,13,0	0/1:29,0:29:15.34:55,0,15	1/1:16,0:16:36.21:202,36,0	1/1:15,0:14:38.51:202,39,0	1/1:15,0:15:41.47:229,41,0	1/1:27,0:27:69.33:383,69,0	1/1:26,0:26:64.76:353,65,0	1/1:25,3:28:41.71:306,42,0	1/1:28,1:29:29.81:234,30,0	1/1:29,2:31:38.18:303,38,0	1/1:19,2:21:29.80:217,30,0	1/1:12,0:12:30.81:189,31,0	1/1:14,0:12:26.82:145,27,0	1/1:8,0:8:16.34:91,16,0	1/1:22,0:20:48.98:282,49,0	1/1:18,0:18:42.79:222,43,0	1/1:15,0:15:30.24:183,30,0	1/1:32,5:36:92.75:778,93,0	1/1:25,2:27:71.60:561,72,0	1/1:15,8:23:65.71:534,66,0	1/1:7,2:9:25.98:213,26,0
chr10	20449385	.	GTTTT	G	6315.19	PASS	AB=1.000;AC=28;AF=0.500;AN=56;BaseQRankSum=15.187;DP=616;FS=1.998;HRun=10;HaplotypeScore=273.3303;InbreedingCoeff=0.8342;MQ=54.69;MQ0=6;MQRankSum=-12.825;QD=22.72;ReadPosRankSum=6.109;VQSLOD=-0.3051;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,109,920	0/0:10,0:10:19.99:0,20,167	0/0:20,0:11:30.15:0,30,400	0/0:28,0:15:27.56:0,28,515	0/0:28,0:27:51.71:0,52,436	1/1:1,15:16:48.15:602,48,0	1/1:6,8:14:35.90:397,36,0	0/0:31,0:31:4.41:0,4,824	0/0:29,0:29:78.25:0,78,1537	1/1:4,11:15:38.97:464,39,0	1/1:1,14:14:42.06:451,42,0	1/1:5,10:15:41.88:432,42,0	1/1:10,16:27:73.98:761,74,0	1/1:7,19:26:68.93:750,69,0	0/1:29,0:29:26.41:26,0,68	0/0:29,0:29:27.27:0,27,165	0/1:33,0:33:23.11:23,0,165	0/0:21,0:21:18.90:0,19,75	1/1:6,6:12:32.24:383,32,0	1/1:3,11:12:30.01:340,30,0	1/1:2,6:8:17.85:184,18,0	1/1:3,18:19:51.06:620,51,0	1/1:6,12:18:44.90:497,45,0	1/1:3,11:15:31.54:385,32,0	0/0:37,0:36:78.49:0,78,662	0/0:27,0:27:59.39:0,59,509	0/0:24,0:24:57.10:0,57,464	0/0:9,0:9:18.05:0,18,215
chr10	20449387	.	T	TG	1329.11	PASS	AB=0.946;AC=25;AF=0.446;AN=56;BaseQRankSum=7.742;DP=610;FS=4.850;HRun=0;HaplotypeScore=261.0251;InbreedingCoeff=0.7502;MQ=54.59;MQ0=8;MQRankSum=-9.479;QD=5.51;ReadPosRankSum=0.549;VQSLOD=3.0257;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,120,947	0/0:11,0:11:20.87:0,21,179	0/0:20,0:11:24.36:0,24,286	0/0:29,0:15:30.52:0,31,350	0/0:29,0:28:65.81:0,66,555	1/1:15,1:16:10.25:91,10,0	1/1:13,0:13:30.80:187,31,0	0/1:33,0:33:2.65:3,0,306	0/0:29,0:29:78.26:0,78,1083	1/1:13,2:15:27.28:157,27,0	0/1:14,1:14:9.88:49,0,10	1/1:10,4:14:2.34:86,2,0	1/1:20,3:24:16.91:186,17,0	1/1:21,3:24:4.14:118,4,0	0/0:29,0:29:40.55:0,41,249	0/0:29,0:29:29.20:0,29,185	0/0:33,0:33:44.31:0,44,262	0/0:21,0:21:29.29:0,29,184	1/1:8,3:11:16.74:124,17,0	1/1:14,0:12:7.16:85,7,0	0/1:8,1:8:6.80:46,0,7	1/1:20,1:19:10.91:90,11,0	1/1:14,3:17:29.82:190,30,0	1/1:14,1:15:20.09:126,20,0	0/0:36,0:35:89.10:0,89,754	0/0:28,0:28:74.67:0,75,628	0/0:23,0:23:65.60:0,66,499	0/0:9,0:9:26.96:0,27,239
chr10	20449389	.	T	TG	1486.57	PASS	AB=0.938;AC=25;AF=0.446;AN=56;BaseQRankSum=7.366;DP=603;FS=4.906;HRun=0;HaplotypeScore=258.3583;InbreedingCoeff=0.8774;MQ=53.21;MQ0=10;MQRankSum=-9.182;QD=7.36;ReadPosRankSum=-1.168;VQSLOD=2.9836;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,106,825	0/0:11,0:11:20.94:0,21,182	0/0:21,0:10:28.94:0,29,276	0/0:30,0:13:23.68:0,24,303	0/0:29,0:28:40.13:0,40,436	1/1:15,1:16:10.25:89,10,0	1/1:12,0:12:17.12:147,17,0	0/0:31,0:31:51.72:0,52,637	0/0:29,0:29:78.26:0,78,1081	1/1:12,2:14:24.34:201,24,0	0/1:14,1:14:3.33:43,0,3	1/1:10,4:14:6.72:136,7,0	1/1:21,3:24:14.25:228,14,0	1/1:21,3:24:13.60:178,14,0	0/0:29,0:29:41.77:0,42,343	0/0:30,0:30:11.24:0,11,232	0/0:31,0:31:9.66:0,10,323	0/0:23,0:23:32.79:0,33,268	1/1:8,3:11:29.86:176,30,0	1/1:12,0:10:4.11:40,4,0	1/1:8,1:8:12.65:75,13,0	1/1:19,1:18:10.63:117,11,0	1/1:14,3:17:22.28:175,22,0	1/1:13,1:14:13.25:100,13,0	0/0:37,0:36:89.08:0,89,718	0/0:27,0:27:71.77:0,72,601	0/0:23,0:23:59.62:0,60,443	0/0:9,0:9:26.95:0,27,235
chr10	20449391	.	TG	T	2612.32	PASS	AB=0.956;AC=34;AF=0.607;AN=56;BaseQRankSum=14.824;DP=645;FS=2.788;HRun=1;HaplotypeScore=278.9718;InbreedingCoeff=0.4332;MQ=50.19;MQ0=10;MQRankSum=-13.118;QD=5.87;ReadPosRankSum=2.318;VQSLOD=0.6592;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,1:39:0.45:0,0,398	0/1:11,0:11:0.10:0,0,90	0/0:20,0:9:14.46:0,14,118	0/1:27,1:11:11.49:11,0,172	0/0:27,0:26:32.56:0,33,206	1/1:20,0:20:53.85:235,54,0	1/1:16,0:16:36.25:161,36,0	0/0:28,0:28:38.88:0,39,611	0/0:31,0:31:80.92:0,81,912	1/1:18,0:18:8.19:114,8,0	1/1:16,0:15:39.36:179,39,0	1/1:21,0:21:54.80:227,55,0	1/1:25,0:25:57.84:283,58,0	1/1:33,0:33:83.27:356,83,0	0/0:25,3:28:10.69:0,11,116	0/1:29,0:29:12.21:12,0,85	0/1:31,0:31:57.59:58,0,120	0/1:23,1:24:3.36:3,0,75	1/1:14,0:14:23.70:149,24,0	1/1:13,0:11:29.26:124,29,0	1/1:13,0:12:21.38:123,21,0	1/1:25,0:23:59.46:276,59,0	1/1:20,0:20:48.61:206,49,0	1/1:19,0:19:42.07:188,42,0	0/1:37,1:37:8.23:8,0,312	0/0:26,1:27:25.91:0,26,310	0/1:18,4:21:77.94:78,0,113	0/1:8,1:9:15.59:16,0,58
chr10	20449398	.	TG	T	1696.49	PASS	AB=1.000;AC=30;AF=0.536;AN=56;BaseQRankSum=16.600;DP=632;FS=8.040;HRun=1;HaplotypeScore=272.7766;InbreedingCoeff=0.7091;MQ=49.94;MQ0=10;MQRankSum=-10.876;QD=5.42;ReadPosRankSum=3.838;VQSLOD=0.2755;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:23.83:0,24,1000	0/1:11,0:11:9.40:9,0,244	0/0:24,1:11:9.07:0,9,122	0/0:28,0:10:23.52:0,24,198	0/0:26,0:25:46.01:0,46,498	1/1:20,0:20:44:179,44,0	1/1:16,0:16:38.26:193,38,0	0/0:27,0:27:37.46:0,37,649	0/0:31,0:31:80.75:0,81,982	1/1:16,0:16:18.10:56,18,0	1/1:16,0:15:28.36:90,28,0	1/1:18,0:18:39.09:182,39,0	1/1:24,0:24:50.27:194,50,0	1/1:29,0:29:53.28:219,53,0	0/0:23,2:25:33.81:0,34,407	0/0:27,0:27:3.71:0,4,282	0/1:27,0:27:13.76:14,0,314	0/0:23,0:23:22.61:0,23,263	1/1:12,0:12:7.95:66,8,0	1/1:16,0:13:24.80:94,25,0	1/1:13,0:12:24.12:117,24,0	1/1:24,1:23:44.27:164,44,0	1/1:17,1:17:38.11:176,38,0	1/1:20,0:20:33.77:134,34,0	0/0:36,1:36:38.85:0,39,805	0/0:30,0:30:56.39:0,56,793	0/1:23,0:22:21.77:22,0,446	0/1:9,0:9:2.14:2,0,176
chr10	20449407	.	T	TG	4456.03	PASS	AB=0.844;AC=23;AF=0.411;AN=56;BaseQRankSum=-15.734;DP=669;FS=4.493;HRun=1;HaplotypeScore=281.6500;InbreedingCoeff=0.7886;MQ=48.58;MQ0=10;MQRankSum=7.423;QD=13.34;ReadPosRankSum=-1.969;VQSLOD=3.4323;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:28,10:39:84.49:805,84,0	1/1:8,1:9:20.42:180,20,0	0/1:25,0:9:1.33:1,0,62	0/0:26,0:8:14.12:0,14,170	1/1:18,10:29:48.81:484,49,0	0/0:24,0:24:65.78:0,66,537	0/0:19,0:19:48.87:0,49,434	0/1:7,14:21:27.52:317,0,28	0/0:30,0:30:74.80:0,75,616	0/0:22,0:22:55.37:0,55,513	0/0:21,0:20:51.04:0,51,419	0/0:21,0:21:61.14:0,61,557	0/0:28,0:28:82.98:0,83,678	0/0:30,0:30:86.27:0,86,723	1/1:20,2:23:33.35:246,33,0	1/1:27,0:27:15.03:137,15,0	0/1:25,2:27:24.36:172,0,24	1/1:23,0:23:16.01:173,16,0	0/0:14,0:14:41.68:0,42,346	0/0:19,0:16:35.61:0,36,278	0/0:14,0:13:36.92:0,37,278	0/0:28,0:26:72.55:0,73,575	0/0:20,0:19:46.92:0,47,350	0/0:19,0:19:46.39:0,46,352	1/1:25,17:41:56.04:679,56,0	1/1:13,19:32:69.34:689,69,0	1/1:20,6:25:27.74:433,28,0	1/1:10,1:11:7:140,7,0
chr10	20449612	.	CA	C	11027.70	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=19.095;DP=670;FS=26.375;HRun=2;HaplotypeScore=96.7453;InbreedingCoeff=0.9999;MQ=84.49;MQ0=0;MQRankSum=-0.947;QD=35.92;ReadPosRankSum=2.267;VQSLOD=2.9066;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,135,2003	0/0:11,0:11:33.11:0,33,495	0/0:22,0:22:42.64:0,43,849	0/0:24,0:24:65.99:0,66,895	0/0:17,0:17:51.17:0,51,763	1/1:0,19:19:54.18:701,54,0	1/1:0,25:25:72.23:935,72,0	0/0:36,0:36:99:0,105,1522	0/0:26,0:26:69.23:0,69,1033	1/1:1,14:15:42.08:505,42,0	1/1:0,23:23:54.18:701,54,0	1/1:1,28:29:81.26:1051,81,0	1/1:1,16:17:45.15:584,45,0	1/1:1,28:29:81.22:1032,81,0	0/0:29,0:29:84.27:0,84,1239	0/0:21,0:21:63.17:0,63,916	0/0:36,0:36:99:0,108,1607	0/0:17,0:17:51.13:0,51,737	1/1:0,25:25:75.24:974,75,0	1/1:0,19:19:57.14:721,57,0	1/1:3,29:32:90.28:1154,90,0	1/1:0,19:19:54.18:701,54,0	1/1:0,18:18:51.17:662,51,0	1/1:1,36:37:88.50:1307,89,0	0/0:23,0:23:69.23:0,69,1016	0/0:20,0:20:57.19:0,57,848	0/0:23,0:23:69.23:0,69,1034	0/0:12,0:12:36.12:0,36,539
chr10	20449856	.	G	GA	3879.76	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=18.488;DP=696;FS=10.916;HRun=1;HaplotypeScore=133.5788;InbreedingCoeff=0.9949;MQ=82.46;MQ0=0;MQRankSum=-1.323;QD=11.58;ReadPosRankSum=0.970;VQSLOD=1.1174;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:58:99:0,172,2346	0/0:4,0:4:12.04:0,12,168	0/0:25,0:24:65.87:0,66,790	0/0:28,0:28:68.91:0,69,841	0/0:13,0:13:39.13:0,39,545	1/1:19,0:19:40.44:176,40,0	1/1:32,0:32:84.17:424,84,0	0/0:28,0:28:78.22:0,78,1016	0/0:18,0:18:54.18:0,54,755	1/1:22,0:22:55.68:340,56,0	1/1:23,1:24:30.14:193,30,0	1/1:31,0:31:83.64:376,84,0	1/1:18,0:18:35.84:234,36,0	1/1:20,0:20:52.28:212,52,0	0/0:29,0:29:87.28:0,87,1200	0/0:16,0:16:48.16:0,48,667	0/0:38,0:38:99:0,111,1458	0/0:29,0:29:81.21:0,81,1081	1/1:17,0:17:45.82:292,46,0	1/1:25,1:26:51.20:248,51,0	1/1:51,2:53:99:507,103,0	1/1:19,0:19:48.25:262,48,0	1/1:14,0:14:25.66:135,26,0	1/1:40,0:40:99:480,102,0	0/0:21,0:20:57.19:0,57,791	0/0:24,0:24:72.23:0,72,989	0/0:23,0:22:69.17:0,69,908	0/0:7,0:7:21.07:0,21,293
chr10	20450730	.	GT	G	11313.86	PASS	AB=0.906;AC=27;AF=0.482;AN=56;BaseQRankSum=14.422;DP=703;FS=2.347;HRun=2;HaplotypeScore=126.0165;InbreedingCoeff=0.9272;MQ=87.39;MQ0=0;MQRankSum=-5.539;QD=32.70;ReadPosRankSum=1.684;VQSLOD=4.5486;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,114,1686	0/0:9,0:9:27.09:0,27,405	0/0:29,0:29:87.23:0,87,1244	0/0:24,0:23:65.81:0,66,945	0/0:19,0:19:57.18:0,57,832	1/1:2,14:16:42.14:545,42,0	1/1:3,25:28:72.23:934,72,0	0/0:34,0:34:96.32:0,96,1421	0/0:28,0:28:81.27:0,81,1214	1/1:1,22:23:66.21:847,66,0	1/1:0,6:6:18.06:234,18,0	1/1:0,32:32:90.29:1167,90,0	1/1:2,26:28:78.25:1012,78,0	1/1:1,34:35:90.29:1168,90,0	0/0:22,0:22:66.22:0,66,988	0/0:19,0:19:57.18:0,57,836	0/0:35,0:35:99:0,102,1529	0/0:40,0:40:99:0,117,1746	1/1:0,20:20:60.20:779,60,0	1/1:1,19:20:51.17:662,51,0	1/1:1,42:43:99:1596,123,0	1/1:1,14:15:42.14:545,42,0	1/1:0,12:12:33.11:428,33,0	1/1:1,38:39:99:1363,105,0	0/0:23,0:23:66.22:0,66,989	0/1:26,3:29:32.45:32,0,1003	0/0:27,0:26:81.27:0,81,1211	0/0:10,0:10:30.10:0,30,450
chr10	20453540	.	TGA	T	263.14	PASS	AB=0.962;AC=10;AF=0.217;AN=46;BaseQRankSum=3.432;DP=700;FS=31.409;HRun=0;HaplotypeScore=142.7717;InbreedingCoeff=0.4497;MQ=75.17;MQ0=18;MQRankSum=0.080;QD=2.09;ReadPosRankSum=2.505;VQSLOD=0.7800;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:3:0,3,25	./.	./.	0/0:78,0:26:0:0,0,0	0/0:23,0:23:5.99:0,6,48	0/0:22,0:22:14.98:0,15,128	0/0:24,0:24:8.83:0,9,57	0/0:27,0:27:2.66:0,3,5	0/0:18,0:21:0.88:0,1,86	0/0:39,0:39:31.12:0,31,286	0/1:13,0:13:0:0,0,0	0/0:20,0:20:6.89:0,7,61	0/0:26,0:27:8.96:0,9,71	0/0:26,0:26:5.81:0,6,44	1/1:15,0:20:2.34:14,2,0	1/1:20,0:27:17.18:90,17,0	1/1:28,4:33:15.34:141,15,0	1/1:17,3:21:15.77:130,16,0	0/0:18,0:18:12:0,12,128	0/0:20,0:20:8.96:0,9,69	./.	0/0:21,0:21:1.26:0,1,36	./.	0/0:22,0:21:2.99:0,3,24	0/0:24,0:23:3:0,3,25	0/0:27,0:27:9.02:0,9,97	0/1:11,1:12:19.54:20,0,78	./.
chr10	20453546	.	A	AGAGAGG	4513.11	PASS	AB=0.905;AC=24;AF=0.429;AN=56;BaseQRankSum=-1.492;DP=764;FS=0.731;HRun=0;HaplotypeScore=202.5608;InbreedingCoeff=0.6568;MQ=69.20;MQ0=25;MQRankSum=-0.472;QD=13.76;ReadPosRankSum=0.991;VQSLOD=4.3129;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:46:82.56:0,83,655	0/0:8,0:7:11.93:0,12,89	0/0:57,0:23:26.28:0,26,231	0/0:74,0:22:15.77:0,16,158	0/0:28,0:28:47.77:0,48,383	1/1:22,0:22:44.93:454,45,0	1/1:23,0:23:40.72:582,41,0	0/1:36,0:35:76.43:356,0,76	0/0:21,0:21:47.40:0,47,409	1/1:41,0:39:57.17:801,57,0	1/1:12,0:12:0.54:97,1,0	1/1:24,0:24:10.68:336,11,0	0/1:12,18:31:22.37:167,0,22	1/1:28,0:28:31.35:428,31,0	0/0:20,0:20:26.49:0,26,233	0/0:29,0:29:62.78:0,63,591	0/0:35,0:35:88.85:0,89,823	0/0:25,0:25:74.88:0,75,740	0/1:18,0:18:44.15:187,0,44	1/1:21,0:21:16.46:347,16,0	0/1:13,0:12:30.80:86,0,31	1/1:22,0:22:32.90:294,33,0	1/1:17,0:16:20.56:176,21,0	1/1:20,0:19:21.50:203,21,0	0/0:25,0:24:47.84:0,48,391	0/0:40,0:38:90.34:0,90,749	0/0:17,0:16:27.23:0,27,246	0/0:10,0:10:20.66:0,21,139
chr10	20454097	.	A	AAT	2061.92	PASS	AB=0.571;AC=18;AF=0.321;AN=56;BaseQRankSum=6.304;DP=679;FS=3.746;HRun=0;HaplotypeScore=152.3061;InbreedingCoeff=0.0064;MQ=74.09;MQ0=0;MQRankSum=-1.039;QD=6.12;ReadPosRankSum=-2.005;VQSLOD=2.9111;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:34:77.30:0,77,367	0/0:3,0:14:14.99:0,15,185	0/0:13,0:14:37.62:0,38,385	0/0:16,0:15:9.93:0,10,186	0/0:12,0:43:65.04:0,65,530	0/1:5,0:34:99:207,0,107	1/1:1,0:23:26.66:280,27,0	0/1:11,0:37:99:230,0,190	0/1:4,0:15:88.57:115,0,89	0/1:7,0:19:74.56:75,0,155	0/1:2,0:21:66.92:192,0,67	0/1:6,1:23:47.40:47,0,146	0/1:4,1:21:63.31:135,0,63	1/1:4,1:21:14.17:183,14,0	0/0:27,0:27:57.30:0,57,1056	0/0:24,0:26:71.61:0,72,940	0/0:29,0:34:63.46:0,63,1199	0/0:27,0:32:63.78:0,64,1073	0/1:6,0:23:94.84:95,0,168	0/1:9,0:32:99:197,0,137	1/1:3,0:21:27.21:244,27,0	0/1:3,0:16:43.44:111,0,43	0/1:4,0:16:60.01:62,0,60	0/1:4,0:15:64.81:67,0,65	0/0:5,0:14:32.48:0,32,217	0/0:10,0:35:37.68:0,38,410	0/0:12,0:25:28.86:0,29,356	0/0:7,0:25:59.07:0,59,314
chr10	20455084	.	CT	C	6490.59	PASS	AB=0.685;AC=29;AF=0.518;AN=56;BaseQRankSum=9.409;DP=671;FS=0.313;HRun=11;HaplotypeScore=106.9935;InbreedingCoeff=0.8030;MQ=71.63;MQ0=0;MQRankSum=0.392;QD=17.04;ReadPosRankSum=1.301;VQSLOD=4.8970;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,3:45:64.79:0,65,1065	0/0:12,0:12:30.06:0,30,311	0/0:17,0:15:26.85:0,27,230	0/0:16,0:15:17.97:0,18,162	0/0:26,3:30:41.82:0,42,626	1/1:4,24:28:71.91:591,72,0	1/1:4,14:18:38.95:320,39,0	1/1:9,25:34:74.82:605,75,0	1/1:1,22:23:47.94:394,48,0	1/1:6,19:25:53.90:441,54,0	1/1:1,20:21:56.88:461,57,0	1/1:6,21:28:52.96:425,53,0	1/1:2,27:29:71.88:591,72,0	1/1:3,21:26:61:480,61,0	0/0:23,0:26:62.80:0,63,604	0/0:18,0:18:32.24:0,32,439	0/0:31,2:35:8.55:0,9,757	0/0:23,0:23:48.04:0,48,487	1/1:4,20:25:61.93:493,62,0	1/1:1,17:19:49.97:400,50,0	0/1:6,11:17:27.95:210,0,28	1/1:5,13:18:35.95:296,36,0	1/1:1,18:19:47.94:394,48,0	0/1:7,20:29:2.08:370,0,2	0/0:23,1:25:47.34:0,47,679	0/1:18,3:22:20.01:20,0,381	0/0:32,0:32:62.61:0,63,853	0/0:11,0:11:27.05:0,27,280
chr10	20457501	.	C	CG	3567.32	PASS	AB=0.596;AC=17;AF=0.304;AN=56;BaseQRankSum=-7.652;DP=601;FS=32.567;HRun=9;HaplotypeScore=82.2598;InbreedingCoeff=0.6703;MQ=76.66;MQ0=0;MQRankSum=-2.230;QD=18.02;ReadPosRankSum=1.056;VQSLOD=2.0860;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,18:21:39.41:413,39,0	1/1:1,4:5:12.03:132,12,0	0/0:25,1:26:17.42:0,17,359	0/0:13,0:11:28.55:0,29,238	1/1:6,20:26:28.16:524,28,0	0/0:17,0:17:44.99:0,45,390	0/0:20,0:20:44.96:0,45,390	0/0:30,0:29:53.91:0,54,466	0/0:2,0:22:42.78:0,43,125	0/0:25,0:26:52.99:0,53,446	0/0:25,0:26:53:0,53,447	0/0:25,0:25:54.85:0,55,513	0/0:15,0:15:29.97:0,30,260	0/0:21,2:23:17.78:0,18,383	0/0:27,0:29:55.01:0,55,451	1/1:3,24:27:54.14:590,54,0	0/1:5,15:20:10:348,0,10	1/1:2,11:13:0.69:218,1,0	0/0:22,0:22:23.39:0,23,389	0/0:19,0:20:40.97:0,41,344	0/0:27,0:27:74.99:0,75,650	0/0:26,0:26:62.96:0,63,543	0/0:18,0:19:44.02:0,44,369	0/0:15,0:17:40.02:0,40,318	1/1:11,13:24:16.07:405,16,0	0/1:8,13:21:32.96:343,0,33	1/1:8,20:28:2.04:475,2,0	0/1:4,8:12:11.02:118,0,11
chr10	20457661	.	G	GT	18917.56	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-19.840;DP=776;FS=0.585;HRun=3;HaplotypeScore=76.5549;InbreedingCoeff=0.9615;MQ=90.04;MQ0=0;MQRankSum=-4.932;QD=36.31;ReadPosRankSum=4.933;VQSLOD=5.1740;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:75.19:0,75,873	0/0:14,0:14:42.12:0,42,493	0/0:39,0:39:99:0,111,1282	0/0:22,0:22:63.05:0,63,699	0/0:20,0:20:57.17:0,57,683	1/1:0,13:13:36.12:504,36,0	1/1:2,23:25:60.20:840,60,0	1/1:6,41:47:99:1649,123,0	0/0:15,0:15:42.13:0,42,503	1/1:2,27:29:81.24:1100,81,0	1/1:2,22:24:60.20:840,60,0	1/1:1,22:23:63.21:882,63,0	1/1:5,22:27:66.22:912,66,0	1/1:2,24:26:66.22:925,66,0	1/1:1,25:26:65.83:924,66,0	1/1:2,36:38:99:1428,102,0	1/1:1,31:32:81.27:1134,81,0	1/1:1,32:33:81.27:1134,81,0	1/1:1,9:10:27.09:375,27,0	1/1:2,29:31:84.24:1154,84,0	1/1:2,40:42:99:1512,108,0	1/1:0,35:35:99:1426,102,0	1/1:0,23:23:63.21:882,63,0	1/1:2,35:37:93.31:1296,93,0	0/0:36,0:36:99:0,108,1295	0/0:27,2:29:0.21:0,0,851	0/0:39,0:39:99:0,111,1308	0/0:15,0:15:45.14:0,45,540
chr10	20458640	.	C	CT	848.12	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=5.033;DP=480;FS=11.571;HRun=2;HaplotypeScore=188.5623;InbreedingCoeff=0.9340;MQ=71.87;MQ0=0;MQRankSum=-6.236;QD=11.78;ReadPosRankSum=-3.829;VQSLOD=0.1323;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:25,1:26:55.16:349,55,0	1/1:6,0:6:11.80:74,12,0	0/0:16,0:16:41.67:0,42,435	0/0:14,0:14:41.77:0,42,417	1/1:8,0:9:14.78:88,15,0	0/0:16,0:16:35.50:0,36,239	0/0:27,0:27:64.77:0,65,424	0/0:32,0:32:89.53:0,90,684	0/0:28,0:28:81.24:0,81,992	0/0:14,0:14:32.30:0,32,259	0/0:5,0:5:7.07:0,7,32	0/0:24,0:24:71.09:0,71,493	0/0:13,0:13:27.50:0,27,178	0/0:38,0:38:81.38:0,81,512	0/0:20,0:20:50.12:0,50,326	0/0:26,0:26:68.08:0,68,468	0/0:26,0:26:65.32:0,65,456	0/0:17,0:17:44.54:0,45,343	0/0:11,0:11:26.58:0,27,201	0/0:9,0:9:20.56:0,21,130	0/0:34,1:35:38.97:0,39,248	0/0:7,0:7:20.76:0,21,144	0/0:9,0:9:14.39:0,14,96	0/0:21,0:21:20.54:0,21,182	1/1:8,1:9:20.69:142,21,0	1/1:7,0:7:17.54:109,18,0	1/1:12,1:13:38.45:261,38,0	1/1:2,0:2:2.80:13,3,0
chr10	20458644	.	G	GGT	10708.49	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=9.078;DP=452;FS=9.272;HRun=0;HaplotypeScore=180.2730;InbreedingCoeff=0.9007;MQ=73.89;MQ0=0;MQRankSum=-11.497;QD=27.32;ReadPosRankSum=1.452;VQSLOD=5.6906;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:24:56.58:533,57,0	1/1:4,0:4:12.03:123,12,0	0/0:17,0:17:44.27:0,44,571	0/0:15,0:15:39.09:0,39,545	1/1:9,0:9:16.99:157,17,0	1/1:13,1:15:36.09:406,36,0	1/1:26,0:26:63.16:773,63,0	1/1:31,0:31:87.22:1177,87,0	0/0:28,0:28:81.25:0,81,1191	1/1:11,0:11:30.07:333,30,0	1/1:5,0:5:12.03:136,12,0	1/1:23,1:24:69.15:732,69,0	1/1:12,1:13:33.08:371,33,0	1/1:33,2:35:84.21:989,84,0	1/1:19,0:19:57.11:630,57,0	1/1:24,0:24:66.16:706,66,0	1/1:23,1:24:57.14:622,57,0	1/1:16,0:16:42.10:446,42,0	1/1:8,0:8:21.06:281,21,0	1/1:8,0:8:21.02:206,21,0	1/1:31,1:33:54.48:590,54,0	1/1:6,0:6:18.04:184,18,0	1/1:9,0:9:14.59:153,15,0	1/1:20,0:20:41.22:361,41,0	1/1:9,0:9:21.01:202,21,0	1/1:5,0:5:15.03:154,15,0	1/1:11,0:12:36.09:413,36,0	1/1:2,0:2:3.01:31,3,0
chr10	20458645	.	G	GTGACTC	33278.67	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-5.247;DP=481;FS=9.341;HRun=0;HaplotypeScore=126.2918;InbreedingCoeff=0.9120;MQ=73.53;MQ0=0;MQRankSum=-11.227;QD=78.86;ReadPosRankSum=2.230;VQSLOD=6.0378;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,19:27:63.22:2276,63,0	1/1:1,4:6:15.04:476,15,0	0/0:17,0:17:47.33:0,47,909	0/0:14,0:14:39.13:0,39,914	1/1:2,5:9:15.31:546,15,0	1/1:3,9:16:33.11:1235,33,0	1/1:4,16:26:51.18:1901,51,0	1/1:7,15:28:72.20:2313,72,0	0/0:28,0:28:81.25:0,81,1967	1/1:1,8:9:24.08:900,24,0	1/1:0,3:4:12.04:403,12,0	1/1:11,20:31:75.24:2659,75,0	1/1:2,10:12:30.10:1119,30,0	1/1:8,25:34:78.74:2913,79,0	1/1:3,15:21:51.18:1889,51,0	1/1:2,21:25:63.22:2357,63,0	1/1:4,18:25:54.19:2015,54,0	1/1:3,14:19:42.14:1546,42,0	1/1:6,7:16:36.12:1178,36,0	1/1:0,7:8:21.07:779,21,0	1/1:14,16:31:45.48:1509,45,0	1/1:1,6:8:18.06:675,18,0	1/1:3,5:12:20.87:787,21,0	1/1:3,15:20:27.56:1011,28,0	1/1:0,6:9:21.07:769,21,0	1/1:3,5:9:21.07:697,21,0	1/1:5,7:16:32.74:1213,33,0	1/1:0,1:1:3.01:113,3,0
chr10	20458646	.	A	ACTCC	11738.91	PASS	AB=1.000;AC=49;AF=0.875;AN=56;BaseQRankSum=8.051;DP=482;FS=5.489;HRun=0;HaplotypeScore=203.7063;InbreedingCoeff=0.7673;MQ=72.54;MQ0=0;MQRankSum=-11.309;QD=27.69;ReadPosRankSum=2.608;VQSLOD=4.0067;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:30:66.22:928,66,0	1/1:6,0:6:15.05:191,15,0	0/0:16,0:17:40.29:0,40,739	0/0:14,0:14:39.10:0,39,703	1/1:11,0:11:14.92:211,15,0	1/1:13,2:15:36.12:497,36,0	1/1:25,0:25:57.18:760,57,0	1/1:25,0:25:63.17:742,63,0	0/0:27,0:27:75.26:0,75,1487	1/1:11,0:11:5.09:293,5,0	1/1:4,0:4:11.87:127,12,0	1/1:30,0:30:47.23:834,47,0	1/1:11,1:12:30.09:387,30,0	1/1:31,2:33:81.26:1055,81,0	1/1:21,0:21:51.16:645,51,0	1/1:23,0:23:63.20:766,63,0	1/1:24,1:25:57.17:716,57,0	1/1:19,0:19:42.10:510,42,0	1/1:16,0:16:39.05:432,39,0	1/1:11,0:11:24.05:282,24,0	0/1:31,0:31:4.48:440,0,4	1/1:9,0:9:21.04:243,21,0	1/1:13,0:13:21.07:261,21,0	1/1:19,0:19:13.10:384,13,0	1/1:8,0:8:21.07:281,21,0	1/1:9,0:9:21.01:252,21,0	1/1:16,1:17:33.09:465,33,0	1/1:1,0:1:3.01:36,3,0
chr10	20459212	.	GTC	G	4178.22	PASS	AB=0.786;AC=16;AF=0.286;AN=56;BaseQRankSum=0.363;DP=676;FS=3.604;HRun=0;HaplotypeScore=129.7139;InbreedingCoeff=0.8006;MQ=59.16;MQ0=7;MQRankSum=-0.436;QD=19.99;ReadPosRankSum=0.913;VQSLOD=3.9806;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,22:29:26.65:576,27,0	1/1:0,7:7:18.06:222,18,0	0/0:41,0:21:32.60:0,33,388	0/0:26,1:19:1.51:0,2,198	0/1:12,18:29:1.35:445,0,1	0/0:31,0:30:66.10:0,66,1060	0/0:33,0:33:42.10:0,42,617	1/1:11,21:32:66.19:805,66,0	0/0:31,0:31:66.21:0,66,1045	0/0:26,0:26:60.20:0,60,980	0/0:15,0:15:24.08:0,24,393	0/0:20,0:20:45.10:0,45,709	0/0:28,0:28:60.21:0,60,987	0/0:13,0:12:3.01:0,3,45	0/0:27,0:27:43.96:0,44,478	0/0:22,0:21:43.47:0,43,518	0/0:20,0:19:29.38:0,29,350	0/0:20,0:20:55.43:0,55,592	0/1:17,1:18:2.23:2,0,364	0/0:15,0:14:27.09:0,27,446	0/0:36,0:34:66.21:0,66,1037	0/0:18,0:18:15.03:0,15,214	0/0:8,0:8:6.02:0,6,98	0/0:36,0:35:12.02:0,12,172	1/1:5,17:22:39.12:485,39,0	1/1:4,23:26:10.70:630,11,0	1/1:5,29:34:63.09:787,63,0	1/1:1,8:9:18.06:225,18,0
chr10	20459240	.	GTC	G	1719.76	PASS	AB=0.980;AC=21;AF=0.404;AN=52;BaseQRankSum=-0.102;DP=640;FS=3.354;HRun=0;HaplotypeScore=141.9843;InbreedingCoeff=0.3142;MQ=47.21;MQ0=16;MQRankSum=-0.491;QD=4.83;ReadPosRankSum=0.632;VQSLOD=3.2252;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:35,0:28:5.28:163,0,5	0/1:12,0:13:9.20:45,0,9	./.	./.	0/1:24,1:25:23.26:70,0,23	0/0:31,0:30:41.78:0,42,335	0/1:37,0:37:48.72:49,0,93	1/1:28,0:28:24.62:223,25,0	0/1:35,0:33:2.73:207,0,3	0/0:28,0:27:39.13:0,39,290	0/0:15,0:14:11.96:0,12,96	0/0:27,0:21:29.91:0,30,238	0/0:24,0:22:29.93:0,30,239	0/1:17,0:15:0:0,0,0	1/1:18,3:20:21.91:143,22,0	1/1:17,1:16:17.38:131,17,0	0/1:12,0:10:28.92:45,0,29	1/1:20,0:18:26.82:197,27,0	0/0:14,0:14:3.64:0,4,85	0/0:21,0:19:20.81:0,21,168	0/0:31,0:27:20.83:0,21,149	0/0:26,0:24:2.99:0,3,24	0/0:14,0:14:0:0,0,0	0/0:35,0:31:3.47:0,3,25	1/1:23,1:24:20.92:169,21,0	1/1:32,0:31:0.95:244,1,0	0/1:28,1:29:18.56:199,0,19	0/1:5,0:5:0:0,0,0
chr10	20459244	.	C	CTG	4135.22	PASS	AB=0.780;AC=21;AF=0.420;AN=50;BaseQRankSum=-11.039;DP=631;FS=2.484;HRun=0;HaplotypeScore=137.6657;InbreedingCoeff=0.6869;MQ=46.69;MQ0=16;MQRankSum=1.213;QD=13.17;ReadPosRankSum=1.979;VQSLOD=3.5855;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:27:45.26:0,45,284	0/1:13,0:13:14.05:14,0,89	./.	./.	0/0:26,0:25:40.45:0,40,281	1/1:29,0:28:54.58:750,55,0	1/1:38,0:38:41.91:477,42,0	0/0:26,0:26:38.10:0,38,404	0/0:34,0:32:67.68:0,68,602	0/1:14,15:28:2.29:507,0,2	1/1:16,0:14:17.84:214,18,0	1/1:22,4:20:32.42:510,32,0	1/1:27,1:25:32.98:512,33,0	./.	0/0:23,0:19:35.97:0,36,312	0/0:19,0:16:26.99:0,27,242	0/0:11,0:9:20.89:0,21,174	0/0:19,0:17:38.95:0,39,345	1/1:6,8:14:29.58:350,30,0	1/1:19,1:18:26.08:344,26,0	1/1:29,0:24:24.98:269,25,0	0/1:11,14:24:1.01:56,0,1	0/1:5,8:14:0:0,0,0	0/0:8,25:30:0.47:0,0,1	0/0:25,0:25:36.57:0,37,222	0/1:32,0:31:99:132,0,246	0/0:27,0:27:53.96:0,54,341	0/0:6,0:6:14.92:0,15,115
chr10	20462003	.	AT	A	1998.67	PASS	AB=0.711;AC=19;AF=0.339;AN=56;BaseQRankSum=-5.052;DP=496;FS=6.641;HRun=13;HaplotypeScore=71.5740;InbreedingCoeff=0.5913;MQ=71.02;MQ0=0;MQRankSum=1.185;QD=9.34;ReadPosRankSum=5.371;VQSLOD=2.8343;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:49.62:0,50,269	0/0:6,0:6:8.65:0,9,48	0/1:8,2:10:10.81:11,0,101	0/0:8,0:7:13.46:0,13,92	0/0:22,0:22:38.54:0,39,202	1/1:7,14:21:18.49:299,18,0	1/1:7,15:23:43.68:312,44,0	0/1:15,2:18:17.62:18,0,198	0/0:7,0:11:17.82:0,18,144	1/1:9,12:21:6.87:192,7,0	1/1:5,13:18:44.65:322,45,0	1/1:7,9:16:26.73:197,27,0	1/1:13,14:27:41.59:304,42,0	0/1:6,6:12:6.93:92,0,7	0/0:22,0:22:17.63:0,18,112	0/0:18,0:18:17.48:0,17,113	0/0:25,0:25:15.14:0,15,93	0/0:18,0:18:23.37:0,23,144	0/0:21,0:22:44.86:0,45,405	0/0:17,0:17:39.04:0,39,366	0/0:10,0:10:21.03:0,21,204	0/1:2,8:13:12.63:134,0,13	0/1:8,8:16:6.49:91,0,6	1/1:6,10:17:31.82:225,32,0	0/0:22,0:22:30.05:0,30,171	0/0:19,0:19:46.26:0,46,291	0/0:24,0:23:12.52:0,13,71	0/0:3,0:3:5.68:0,6,28
chr10	20462532	.	A	AC	12689	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-16.174;DP=716;FS=0.895;HRun=2;HaplotypeScore=63.7735;InbreedingCoeff=0.9997;MQ=86.29;MQ0=0;MQRankSum=-3.490;QD=37.99;ReadPosRankSum=0.276;VQSLOD=5.3019;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,147,1820	0/0:11,0:11:30.09:0,30,372	0/0:26,0:26:72.19:0,72,856	0/0:24,0:24:34.77:0,35,625	0/0:27,0:27:72.22:0,72,891	1/1:2,24:26:63.21:907,63,0	1/1:0,21:21:57.19:821,57,0	1/1:3,27:30:87.24:1193,87,0	0/0:22,0:22:66.16:0,66,778	1/1:4,30:34:90.30:1291,90,0	1/1:0,17:17:51.17:733,51,0	1/1:1,15:16:36.12:518,36,0	1/1:1,33:34:87.27:1226,87,0	1/1:2,23:25:60.20:863,60,0	0/0:36,0:36:99:0,105,1300	0/0:43,0:43:99:0,126,1547	0/0:36,0:36:96.29:0,96,1177	0/0:23,0:23:66.21:0,66,817	1/1:2,20:22:60.17:820,60,0	1/1:1,20:21:60.20:863,60,0	1/1:1,22:23:66.22:950,66,0	1/1:2,17:19:48.16:691,48,0	1/1:0,24:24:69.23:991,69,0	1/1:1,21:22:57.19:820,57,0	0/0:28,0:28:81.25:0,81,1004	0/0:20,0:20:54.17:0,54,669	0/0:24,0:24:66.21:0,66,815	0/0:11,0:11:27.08:0,27,335
chr10	20465547	.	CGTGTGTGTGT	C	989.35	PASS	AB=1.000;AC=17;AF=0.354;AN=48;BaseQRankSum=4.625;DP=502;FS=1.072;HRun=0;HaplotypeScore=134.3429;InbreedingCoeff=0.7097;MQ=66.50;MQ0=8;MQRankSum=-4.735;QD=6.18;ReadPosRankSum=0.752;VQSLOD=2.5639;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:36.12:0,36,1460	0/0:6,0:7:11.63:0,12,281	./.	./.	0/0:20,0:19:15.05:0,15,576	1/1:12,4:15:6.02:177,6,0	1/1:15,6:23:11.93:251,12,0	0/0:27,0:25:5.93:0,6,41	0/0:11,0:14:15.03:0,15,239	0/0:12,0:11:0:0,0,0	./.	1/1:19,4:23:5.68:106,6,0	1/1:12,0:15:3.01:70,3,0	1/1:18,1:19:9.03:172,9,0	0/0:18,0:19:18.03:0,18,427	0/0:15,0:19:18.06:0,18,541	0/0:17,0:21:27.56:0,28,724	0/0:19,0:23:33.97:0,34,634	1/1:15,0:16:3.01:70,3,0	0/0:17,0:17:0:0,0,0	./.	1/1:5,5:10:6.02:123,6,0	0/1:17,0:16:0:0,0,0	1/1:13,8:21:6.02:177,6,0	0/0:11,0:11:12.03:0,12,354	0/0:22,0:21:27.09:0,27,1085	0/0:9,0:9:7.50:0,8,276	0/0:10,0:10:18.06:0,18,766
chr10	20466209	.	AT	A	5293.09	PASS	AB=0.586;AC=27;AF=0.482;AN=56;BaseQRankSum=11.813;DP=546;FS=8.966;HRun=9;HaplotypeScore=58.1458;InbreedingCoeff=0.9430;MQ=76.18;MQ0=0;MQRankSum=-0.087;QD=21.52;ReadPosRankSum=0.235;VQSLOD=5.2937;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,117,1321	0/0:10,0:10:27.08:0,27,308	0/0:17,1:18:8.31:0,8,249	0/0:6,0:6:11.96:0,12,117	0/0:22,0:23:66.02:0,66,731	1/1:4,25:29:69.02:632,69,0	0/1:5,12:17:1.66:242,0,2	1/1:13,9:22:23.98:215,24,0	0/0:15,0:15:39.12:0,39,450	1/1:2,14:16:39.01:353,39,0	1/1:0,10:10:27.01:247,27,0	1/1:0,22:22:63.03:576,63,0	1/1:1,13:14:36.02:329,36,0	1/1:4,19:23:57.02:521,57,0	0/0:14,0:14:41.96:0,42,465	0/0:13,0:13:33.10:0,33,381	0/0:36,0:36:99:0,102,1149	0/0:32,0:32:84.21:0,84,955	1/1:4,15:19:41.91:360,42,0	1/1:2,11:13:33.01:302,33,0	1/1:1,13:14:36.02:330,36,0	1/1:0,14:15:38.05:335,38,0	1/1:0,10:10:30.02:275,30,0	1/1:1,21:22:63.03:577,63,0	0/0:28,0:28:71.73:0,72,831	0/0:21,0:22:56.99:0,57,630	0/0:20,0:24:65.68:0,66,692	0/0:14,0:14:24.07:0,24,277
chr10	20466455	.	G	GGGGAGACC	6130.15	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=-2.808;DP=570;FS=8.352;HRun=0;HaplotypeScore=150.9007;InbreedingCoeff=0.8621;MQ=86.22;MQ0=0;MQRankSum=-10.814;QD=55.73;ReadPosRankSum=1.281;VQSLOD=4.2787;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,111,2784	0/0:5,0:5:12.51:0,13,294	0/0:18,0:18:27.99:0,28,708	0/1:27,0:27:13.68:14,0,696	0/0:13,0:13:24.07:0,24,551	0/0:16,0:16:33.11:0,33,868	0/0:27,0:27:63.13:0,63,1459	0/0:26,0:26:60.20:0,60,1507	0/0:20,0:20:45.15:0,45,1155	0/0:18,0:18:36.12:0,36,853	0/0:10,0:10:18.06:0,18,451	0/0:24,0:24:63.22:0,63,1635	0/0:21,0:21:42.14:0,42,1113	0/0:31,0:31:72.25:0,72,1852	1/1:13,7:21:27.05:976,27,0	1/1:6,11:18:48.12:1879,48,0	1/1:12,12:24:33.11:1401,33,0	1/1:9,10:20:45.15:1861,45,0	0/0:22,0:22:36.12:0,36,902	0/0:12,0:12:24.08:0,24,562	0/0:42,0:42:99:0,105,2609	0/0:15,0:15:30.08:0,30,670	0/0:16,0:16:29.98:0,30,556	0/0:18,0:18:45.15:0,45,1168	0/0:20,0:20:54.17:0,54,1317	0/0:16,0:16:39.12:0,39,924	0/0:11,0:11:30.09:0,30,743	0/0:9,0:9:27.06:0,27,659
chr10	20467441	.	GAA	G	10933.90	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-1.957;DP=608;FS=4.614;HRun=12;HaplotypeScore=98.7314;InbreedingCoeff=0.9781;MQ=69.35;MQ0=2;MQRankSum=-0.758;QD=19.81;ReadPosRankSum=4.768;VQSLOD=4.3748;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,39:44:92.92:927,93,0	1/1:3,8:11:21.03:212,21,0	0/0:25,0:14:21.20:0,21,244	0/0:18,1:12:13.19:0,13,88	1/1:3,20:23:47.87:472,48,0	1/1:5,12:17:30.03:305,30,0	1/1:4,9:14:17.76:163,18,0	1/1:5,0:25:42.44:180,42,0	0/0:12,0:12:30.04:0,30,399	1/1:1,11:12:30.04:305,30,0	1/1:4,8:12:21.03:213,21,0	1/1:3,20:25:50.56:481,51,0	1/1:3,21:24:48.09:488,48,0	1/1:3,20:23:46.10:485,46,0	1/1:4,23:27:30.43:549,30,0	1/1:4,12:16:33.06:336,33,0	1/1:2,29:32:65.87:722,66,0	1/1:3,23:25:16.54:454,17,0	1/1:4,10:14:32.76:302,33,0	1/1:1,17:18:45.06:457,45,0	1/1:6,30:37:53.84:602,54,0	1/1:2,14:16:36.04:366,36,0	1/1:4,8:12:23.55:225,24,0	1/1:3,32:35:91.74:919,92,0	1/1:4,16:20:33.04:336,33,0	1/1:6,16:25:53.51:494,54,0	1/1:4,17:23:44.53:420,45,0	1/1:0,18:20:47.57:522,48,0
chr10	20468444	.	GATAATAATAATAATA	G	4283.34	PASS	AC=38;AF=1.000;AN=38;BaseQRankSum=1.660;DP=265;FS=0.000;HRun=0;HaplotypeScore=106.5432;InbreedingCoeff=-0.1000;MQ=68.53;MQ0=4;MQRankSum=1.299;QD=18.79;ReadPosRankSum=1.660;VQSLOD=2.4800;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:8,15:23:15.05:617,15,0	1/1:2,0:2:3.01:50,3,0	./.	./.	1/1:3,1:5:5.80:128,6,0	1/1:7,0:18:12.04:419,12,0	./.	1/1:30,0:29:4.91:21,5,0	1/1:6,3:9:9.03:371,9,0	1/1:6,0:11:10.19:229,10,0	1/1:3,0:10:6.02:210,6,0	1/1:7,0:11:3.01:105,3,0	1/1:4,0:6:6.02:192,6,0	./.	1/1:9,0:9:3.01:50,3,0	1/1:5,0:7:3.01:105,3,0	1/1:10,0:20:6.02:209,6,0	1/1:9,0:15:12.04:419,12,0	1/1:9,0:14:4.70:63,5,0	./.	./.	./.	./.	./.	1/1:3,7:10:6.02:247,6,0	1/1:4,3:7:8.99:187,9,0	1/1:3,2:5:6.02:247,6,0	1/1:7,5:13:12.04:415,12,0
chr10	20469161	.	G	GTCC	23586.66	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-10.004;DP=557;FS=16.635;HRun=0;HaplotypeScore=75.9368;InbreedingCoeff=0.9234;MQ=93.39;MQ0=0;MQRankSum=-9.460;QD=49.04;ReadPosRankSum=4.636;VQSLOD=6.0101;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,29:31:66.21:1471,66,0	1/1:0,10:11:27.09:566,27,0	0/0:28,0:28:72.20:0,72,1072	0/0:25,0:25:59.42:0,59,875	1/1:3,13:17:33.03:637,33,0	1/1:2,18:21:45.11:957,45,0	1/1:2,19:23:48.16:1070,48,0	1/1:3,23:28:75.20:1489,75,0	0/0:23,0:23:63.22:0,63,1026	1/1:3,12:18:48.13:971,48,0	1/1:1,6:8:21.07:463,21,0	1/1:3,24:28:69.14:1516,69,0	1/1:1,26:28:75.26:1668,75,0	1/1:2,16:20:42.14:937,42,0	1/1:0,20:21:51.18:1135,51,0	1/1:3,19:24:51.18:1136,51,0	1/1:2,25:27:60.68:1340,61,0	1/1:2,19:23:48.16:1072,48,0	1/1:5,14:19:45.10:914,45,0	1/1:1,5:6:12.04:268,12,0	1/1:7,26:34:54.18:1175,54,0	1/1:1,11:12:27.09:603,27,0	1/1:0,8:8:15.05:334,15,0	1/1:2,27:29:72.25:1608,72,0	1/1:1,13:15:36.12:803,36,0	1/1:1,11:12:33.11:719,33,0	1/1:2,12:17:32.75:669,33,0	1/1:0,1:1:3.01:67,3,0
chr10	20469706	.	A	AT	1321.65	PASS	AB=0.895;AC=15;AF=0.268;AN=56;BaseQRankSum=5.557;DP=545;FS=34.329;HRun=0;HaplotypeScore=90.0712;InbreedingCoeff=-0.2086;MQ=57.90;MQ0=18;MQRankSum=-2.721;QD=6.61;ReadPosRankSum=5.014;VQSLOD=1.7864;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:33:86.99:0,87,732	0/0:10,0:10:23.97:0,24,205	0/0:46,0:10:22.11:0,22,175	0/0:34,0:13:10.53:0,11,113	0/0:15,0:15:35.37:0,35,291	0/1:11,5:16:57.50:126,0,57	1/1:8,1:9:4.08:92,4,0	0/1:27,2:29:99:206,0,200	0/0:17,0:17:41.89:0,42,366	0/1:17,4:21:99:197,0,112	0/1:13,5:17:99:120,0,102	0/1:10,3:13:62.42:62,0,88	0/1:10,1:11:52.77:91,0,53	0/1:13,1:13:46.38:141,0,46	0/0:18,0:18:50.34:0,50,405	0/0:18,0:18:47.12:0,47,419	0/0:31,0:29:77.27:0,77,659	0/0:27,0:27:70.10:0,70,574	0/1:20,2:21:89.34:89,0,164	0/1:16,3:19:90.74:137,0,91	0/1:4,0:4:16.65:17,0,17	0/1:3,0:3:10.48:33,0,10	0/1:11,0:11:51.16:88,0,51	0/1:8,1:9:16.17:81,0,16	0/0:18,0:18:35.81:0,36,293	0/0:31,0:31:53.26:0,53,590	0/0:20,0:17:47.88:0,48,410	0/0:23,0:20:46.21:0,46,361
chr10	20469713	.	A	ATAAAAAAAAAAT	9716.67	PASS	AB=1.000;AC=27;AF=0.482;AN=56;BaseQRankSum=1.814;DP=530;FS=9.911;HRun=0;HaplotypeScore=188.0252;InbreedingCoeff=0.9130;MQ=57.95;MQ0=20;MQRankSum=-6.741;QD=51.41;ReadPosRankSum=5.910;VQSLOD=3.6041;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:32:79.70:0,80,1229	0/0:9,0:9:23.40:0,23,303	0/0:48,0:10:13.97:0,14,240	0/0:39,0:15:16:0,16,229	0/0:14,0:14:32.96:0,33,468	1/1:10,5:16:44.80:1057,45,0	1/1:8,1:9:15.73:498,16,0	0/1:26,0:26:3.09:776,0,3	0/0:17,0:17:41.99:0,42,598	1/1:14,4:18:30.90:1310,31,0	1/1:12,4:16:46.07:1221,46,0	1/1:10,3:13:35.73:909,36,0	1/1:7,1:8:14.50:443,14,0	1/1:13,1:13:24.78:669,25,0	0/0:20,0:20:56.88:0,57,609	0/0:17,0:17:43.67:0,44,677	0/0:30,0:28:71.37:0,71,946	0/0:26,0:26:73.85:0,74,997	1/1:20,2:21:46.99:857,47,0	1/1:16,3:18:43.77:989,44,0	1/1:5,0:5:11.16:81,11,0	1/1:3,0:3:8.95:218,9,0	1/1:10,0:10:29.19:454,29,0	1/1:8,1:9:5.34:235,5,0	0/0:18,0:18:41.85:0,42,492	0/0:30,0:30:79.19:0,79,879	0/0:19,0:16:44.98:0,45,544	0/0:18,0:15:35.42:0,35,414
chr10	20470096	.	C	CCCTG	21684.57	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-15.087;DP=735;FS=0.000;HRun=0;HaplotypeScore=112.6976;InbreedingCoeff=0.9755;MQ=86.90;MQ0=2;MQRankSum=-3.544;QD=58.77;ReadPosRankSum=3.479;VQSLOD=6.0649;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,117,2150	0/0:6,0:6:18.06:0,18,336	0/0:28,0:28:72.22:0,72,1273	0/0:26,0:26:63.18:0,63,1133	0/0:19,0:19:42.13:0,42,753	1/1:3,15:18:39.13:998,39,0	1/1:5,24:29:72.11:1738,72,0	0/0:31,0:31:75.24:0,75,1343	0/0:24,0:24:72.24:0,72,1314	1/1:9,32:43:99:2658,110,0	1/1:0,10:11:24.08:640,24,0	1/1:7,30:38:99:2603,105,0	1/1:4,29:34:78.22:1980,78,0	1/1:3,29:34:81.04:2063,81,0	0/0:21,0:21:51.15:0,51,919	0/0:21,0:21:57.18:0,57,1033	0/0:45,0:45:99:0,129,2342	0/0:28,0:28:78.23:0,78,1419	1/1:6,17:23:60.16:1483,60,0	1/1:3,15:22:36.12:959,36,0	1/1:4,41:47:99:2718,102,0	1/1:3,15:18:39.13:1014,39,0	1/1:0,17:17:45.15:1199,45,0	1/1:7,22:30:63.09:1633,63,0	0/0:24,0:24:63.22:0,63,1166	0/0:29,1:30:4.48:0,4,1346	0/0:17,0:17:48.16:0,48,895	0/0:4,0:4:12.04:0,12,223
chr10	20471147	.	C	CT	5726.15	PASS	AB=1.000;AC=36;AF=0.643;AN=56;BaseQRankSum=11.570;DP=639;FS=4.522;HRun=8;HaplotypeScore=154.0997;InbreedingCoeff=0.8791;MQ=62.80;MQ0=0;MQRankSum=-7.550;QD=14.35;ReadPosRankSum=-2.527;VQSLOD=2.8639;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:73.79:0,74,474	0/0:15,0:15:32.47:0,32,203	0/0:18,0:10:9.29:0,9,70	0/1:10,0:6:0:0,0,0	0/0:46,0:46:99:0,112,734	1/1:7,19:27:61.38:530,61,0	1/1:5,7:12:23.32:220,23,0	0/1:41,0:41:22.70:83,0,23	0/0:22,0:22:57.01:0,57,517	1/1:18,8:29:55.59:451,56,0	1/1:5,12:20:47.06:363,47,0	1/1:7,12:21:39.04:294,39,0	1/1:6,10:17:31.23:292,31,0	1/1:4,9:15:22.33:184,22,0	1/1:24,0:24:59.07:445,59,0	1/1:40,0:40:83.12:645,83,0	1/1:11,0:11:29.91:176,30,0	1/1:13,0:13:33.95:179,34,0	1/1:18,6:27:37.52:324,38,0	1/1:14,13:30:60.26:498,60,0	1/1:1,5:6:13.32:97,13,0	1/1:13,13:27:57.71:486,58,0	1/1:12,9:23:45.78:357,46,0	1/1:0,5:6:11.89:103,12,0	0/0:30,0:30:82.80:0,83,529	0/0:27,0:27:59.13:0,59,379	0/0:39,0:39:94.27:0,94,602	0/0:14,0:14:35.41:0,35,224
chr10	20471155	.	TA	T	6137.31	PASS	AB=1.000;AC=49;AF=0.875;AN=56;BaseQRankSum=3.410;DP=578;FS=1.054;HRun=11;HaplotypeScore=142.4613;InbreedingCoeff=0.8085;MQ=62.50;MQ0=1;MQRankSum=-3.347;QD=12.25;ReadPosRankSum=4.315;VQSLOD=3.4694;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,24:28:64.93:519,65,0	1/1:0,13:13:32.96:270,33,0	0/0:22,0:14:14.79:0,15,156	0/1:8,0:3:0.35:0,0,17	1/1:9,36:45:95.31:757,95,0	1/1:21,0:24:44.89:137,45,0	1/1:8,0:10:6.36:34,6,0	0/0:4,0:34:71.29:0,71,402	0/0:21,0:21:63.14:0,63,657	1/1:17,0:26:16.36:82,16,0	1/1:16,0:18:26.57:86,27,0	1/1:16,0:18:28.35:89,28,0	1/1:14,0:16:13.12:56,13,0	1/1:11,0:11:11.01:33,11,0	1/1:6,18:24:56.88:461,57,0	1/1:7,30:38:79.90:643,80,0	1/1:6,7:14:31.14:210,31,0	1/1:3,12:15:41.52:325,42,0	1/1:14,0:17:12.73:51,13,0	1/1:19,0:23:39.23:118,39,0	1/1:6,0:6:3.88:13,4,0	1/1:18,0:20:29.09:87,29,0	1/1:16,0:17:22.07:64,22,0	1/1:6,0:7:7.98:24,8,0	1/1:1,28:29:77.90:640,78,0	1/1:2,22:24:62.88:508,63,0	1/1:6,31:38:81.28:658,81,0	1/1:1,11:12:32.95:270,33,0
chr10	20471665	.	CAGAGAGAGAG	C	1852.78	PASS	AB=0.848;AC=17;AF=0.327;AN=52;BaseQRankSum=4.408;DP=645;FS=37.318;HRun=0;HaplotypeScore=203.3397;InbreedingCoeff=0.6062;MQ=66.94;MQ0=13;MQRankSum=-4.619;QD=9.26;ReadPosRankSum=1.585;VQSLOD=1.5097;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:23,1:28:13.65:111,0,14	0/0:8,0:8:0:0,0,0	0/0:52,0:20:0.94:0,1,2	0/0:74,0:30:0.89:0,1,2	./.	0/0:11,0:11:20.84:0,21,298	0/0:17,0:20:6.49:0,6,101	0/0:34,0:33:9.43:0,9,80	0/0:20,0:20:30.10:0,30,1300	0/0:18,0:18:3.01:0,3,33	0/0:15,0:15:6.02:0,6,118	0/0:16,0:17:11.53:0,12,200	0/0:19,0:20:15.52:0,16,378	0/0:17,0:18:12.02:0,12,214	1/1:17,1:21:9.03:243,9,0	1/1:21,5:26:9.03:264,9,0	1/1:29,3:35:20.05:511,20,0	1/1:14,1:15:3.01:87,3,0	./.	0/0:18,0:18:8.69:0,9,97	0/0:24,0:24:27.07:0,27,508	0/0:18,0:19:8.97:0,9,134	0/0:19,0:19:12.02:0,12,207	0/0:19,0:22:9.01:0,9,147	1/1:11,1:15:9.03:228,9,0	1/1:18,1:19:2.73:88,3,0	1/1:20,3:23:3.01:88,3,0	1/1:9,7:18:9.73:397,10,0
chr10	20472089	.	GAAAGTGGACCGGACACC	G	13743.18	PASS	AB=0.583;AC=15;AF=0.268;AN=56;BaseQRankSum=15.320;DP=718;FS=7.356;HRun=0;HaplotypeScore=327.1512;InbreedingCoeff=0.9066;MQ=83.87;MQ0=0;MQRankSum=-14.065;QD=84.31;ReadPosRankSum=2.430;VQSLOD=3.5820;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,18:26:36.12:1755,36,0	1/1:3,6:10:21.07:1025,21,0	0/0:24,0:24:66.19:0,66,3639	0/0:23,0:23:66.23:0,66,4108	1/1:3,26:29:60.21:2762,60,0	0/0:26,0:26:78.27:0,78,6020	0/0:30,0:30:81.28:0,81,5832	1/1:16,11:27:32.26:1314,32,0	0/0:26,0:26:78.27:0,78,5860	0/0:26,0:25:78.27:0,78,6039	0/0:26,0:26:69.24:0,69,5182	0/0:27,0:27:72.25:0,72,5784	0/0:34,0:34:93.30:0,93,7224	0/0:34,0:34:99:0,99,7268	0/0:31,0:31:93.32:0,93,7530	0/0:33,0:33:93.29:0,93,6585	0/0:33,0:33:84.29:0,84,6781	0/0:29,0:29:81.23:0,81,5875	0/0:22,0:22:57.20:0,57,3915	0/0:20,0:20:60.21:0,60,4575	0/0:24,0:24:63.20:0,63,4723	0/0:28,0:28:72.22:0,72,5220	0/0:30,0:30:84.29:0,84,6652	0/0:29,0:29:75.26:0,75,6011	1/1:2,11:13:30.10:1468,30,0	0/1:8,20:28:99:2631,0,435	1/1:4,14:18:39.13:1908,39,0	1/1:2,10:12:18.06:881,18,0
chr10	20473049	.	C	CTA	3655.80	PASS	AB=1.000;AC=31;AF=0.554;AN=56;BaseQRankSum=6.923;DP=542;FS=9.182;HRun=0;HaplotypeScore=100.6287;InbreedingCoeff=0.6925;MQ=68.71;MQ0=11;MQRankSum=-1.972;QD=11.61;ReadPosRankSum=0.362;VQSLOD=2.4986;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:92.77:0,93,791	0/0:11,0:11:6.10:0,6,151	0/0:27,0:18:39.04:0,39,433	0/0:23,0:19:31.25:0,31,354	0/0:14,0:14:18.38:0,18,266	1/1:13,1:14:7.91:166,8,0	1/1:25,0:24:40.81:368,41,0	1/1:23,0:23:58.38:466,58,0	0/0:8,0:8:13.61:0,14,119	1/1:22,0:22:30.50:327,30,0	0/1:5,0:5:5.62:39,0,6	0/1:15,0:15:22.95:92,0,23	1/1:16,0:16:4.72:136,5,0	1/1:19,0:19:11.90:181,12,0	1/1:24,0:24:5.80:146,6,0	1/1:17,0:17:9.03:117,9,0	1/1:19,2:21:21.54:307,22,0	1/1:22,2:23:9.67:221,10,0	1/1:11,0:11:25.71:180,26,0	1/1:11,0:11:14.54:134,15,0	0/0:9,31:40:3.56:0,4,28	1/1:19,0:19:15.69:220,16,0	1/1:13,0:13:13.33:182,13,0	0/1:36,0:36:9.67:373,0,10	0/0:19,0:19:28.40:0,28,409	0/0:17,0:16:48.01:0,48,440	0/0:20,0:20:55.85:0,56,451	0/0:6,0:5:14.97:0,15,123
chr10	20473050	.	T	TATAC	4153.45	PASS	AB=0.910;AC=23;AF=0.411;AN=56;BaseQRankSum=4.081;DP=576;FS=8.213;HRun=0;HaplotypeScore=122.8679;InbreedingCoeff=0.0471;MQ=64.40;MQ0=14;MQRankSum=-1.063;QD=11.87;ReadPosRankSum=0.434;VQSLOD=2.4240;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:44:95.77:0,96,873	0/0:11,0:12:23.55:0,24,171	0/0:26,0:17:39.06:0,39,433	0/0:23,0:16:31.35:0,31,354	0/0:17,0:17:34.80:0,35,284	0/1:15,0:16:23.34:119,0,23	1/1:25,0:25:17.75:340,18,0	1/1:23,0:23:63.44:672,63,0	0/1:9,0:14:29.01:29,0,103	0/1:19,0:19:14:293,0,14	0/1:5,0:5:32.45:38,0,32	0/1:16,0:16:64.46:91,0,64	0/1:18,0:18:36.40:128,0,36	0/1:20,0:20:15.75:167,0,16	0/1:6,21:31:7.98:318,0,8	1/1:4,13:19:9.03:251,9,0	1/1:5,17:23:1.09:441,1,0	0/1:4,19:25:3.72:279,0,4	1/1:11,0:13:13.40:150,13,0	0/1:11,0:12:8.44:114,0,8	0/0:40,0:41:16.30:0,16,112	0/1:17,0:18:23.67:193,0,24	0/1:13,0:13:10.12:168,0,10	0/1:38,0:38:99:362,0,168	0/0:18,0:19:44.82:0,45,474	0/0:18,0:17:47.52:0,48,455	0/0:16,0:20:55.89:0,56,522	0/0:5,0:5:14.98:0,15,137
chr10	20473227	.	G	GTTTCTA	25518.21	PASS	AB=0.964;AC=29;AF=0.518;AN=56;BaseQRankSum=-10.958;DP=640;FS=13.470;HRun=0;HaplotypeScore=178.0657;InbreedingCoeff=0.9269;MQ=96.92;MQ0=0;MQRankSum=-18.885;QD=87.99;ReadPosRankSum=-1.966;VQSLOD=5.2243;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,117,2976	0/0:11,0:11:33.11:0,33,843	0/0:37,0:37:99:0,108,2665	0/0:36,0:36:99:0,105,2401	0/0:19,0:18:51.18:0,51,1291	1/1:3,21:24:69.19:2455,69,0	1/1:6,12:19:54.19:1967,54,0	1/1:7,22:36:99:3320,105,0	0/0:20,0:20:60.21:0,60,1508	1/1:1,20:22:60.21:2253,60,0	1/1:1,5:6:18.06:634,18,0	1/1:2,20:24:66.23:2472,66,0	1/1:1,15:17:51.18:1913,51,0	1/1:1,22:24:69.24:2553,69,0	0/0:28,0:28:75.21:0,75,1730	0/0:28,0:28:72.03:0,72,1794	0/0:40,0:40:99:0,111,2785	0/0:29,0:29:81.28:0,81,2012	1/1:4,6:11:30.09:1007,30,0	1/1:1,7:9:24.08:880,24,0	1/1:5,9:16:33.11:1167,33,0	1/1:2,18:22:60.21:2142,60,0	1/1:1,10:13:29.55:1081,30,0	1/1:5,13:20:48.16:1642,48,0	0/0:16,0:16:45.15:0,45,1140	0/1:26,1:27:31.49:31,0,1891	0/0:37,0:37:99:0,111,2781	0/0:10,0:10:30.10:0,30,769
chr10	20473256	.	C	CTCCG	7381.33	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-10.196;DP=637;FS=16.422;HRun=0;HaplotypeScore=193.2443;InbreedingCoeff=0.9938;MQ=93.45;MQ0=0;MQRankSum=1.055;QD=58.12;ReadPosRankSum=5.113;VQSLOD=5.0578;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:93.28:0,93,1667	0/0:12,0:12:33.11:0,33,593	0/0:36,0:36:78.24:0,78,1371	0/0:27,0:27:69.57:0,70,1195	0/0:19,0:18:51.16:0,51,919	0/0:25,0:25:72.25:0,72,1322	0/0:21,0:21:60.15:0,60,1051	0/0:35,0:35:99:0,99,1720	0/0:17,0:17:42.09:0,42,674	0/0:25,0:25:62.94:0,63,1108	0/0:6,0:6:18.06:0,18,335	0/0:27,0:27:60.21:0,60,1117	0/0:30,0:30:78.22:0,78,1414	0/0:26,0:26:66.14:0,66,1125	1/1:5,25:31:57.20:1497,57,0	1/1:1,22:27:66.05:1658,66,0	1/1:1,38:39:90.31:2397,90,0	1/1:5,25:30:72.11:1829,72,0	0/0:17,0:17:45.11:0,45,770	0/0:8,0:8:18.05:0,18,304	0/0:17,0:17:42.01:0,42,677	0/0:18,0:18:48.16:0,48,893	0/0:11,0:11:24.49:0,24,409	0/0:21,0:21:39.45:0,39,650	0/0:15,0:15:42.14:0,42,783	0/0:28,0:28:78.26:0,78,1427	0/0:29,0:29:84.27:0,84,1535	0/0:7,0:7:21.07:0,21,392
chr10	20473512	.	T	TCTCCTCCTCCTC	4618.72	PASS	AB=0.632;AC=39;AF=0.975;AN=40;BaseQRankSum=-1.109;DP=308;FS=0.000;HRun=0;HaplotypeScore=106.2182;InbreedingCoeff=0.0457;MQ=70.47;MQ0=9;MQRankSum=-1.525;QD=18.78;ReadPosRankSum=1.663;VQSLOD=3.1618;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:16:27.04:804,27,0	1/1:3,0:3:3.01:122,3,0	1/1:23,0:9:2.59:9,3,0	./.	./.	1/1:6,0:6:6.02:282,6,0	1/1:26,0:25:5.19:313,5,0	1/1:14,0:14:9.02:172,9,0	0/1:5,7:12:0:0,0,0	./.	./.	1/1:16,0:16:2.96:171,3,0	1/1:13,0:13:2.54:159,3,0	1/1:7,0:6:3.01:106,3,0	1/1:15,0:15:5.95:179,6,0	1/1:10,0:10:6.02:325,6,0	1/1:13,0:13:6.02:245,6,0	1/1:9,0:9:13.20:240,13,0	./.	./.	1/1:19,0:19:5.23:61,5,0	./.	./.	1/1:10,0:10:6.02:199,6,0	1/1:9,0:9:15.05:492,15,0	1/1:7,0:7:12.04:378,12,0	1/1:13,0:13:6.02:150,6,0	1/1:4,0:4:6.02:213,6,0
chr10	20473513	.	C	CTCT	1717.59	PASS	AB=1.000;AC=24;AF=0.444;AN=54;BaseQRankSum=6.309;DP=302;FS=0.734;HRun=0;HaplotypeScore=75.6974;InbreedingCoeff=0.2545;MQ=69.17;MQ0=11;MQRankSum=-5.403;QD=9.14;ReadPosRankSum=3.578;VQSLOD=2.4412;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:15,2:16:30.21:529,30,0	1/1:2,1:3:8.38:93,8,0	0/0:22,0:8:17.47:0,17,176	0/0:15,0:11:26.99:0,27,243	1/1:7,1:8:20.94:172,21,0	0/1:6,0:6:15.02:37,0,15	0/1:26,0:25:21.86:22,0,150	0/0:13,0:12:0.33:0,0,122	0/0:12,0:12:14.98:0,15,124	0/0:6,0:6:14.92:0,15,118	0/0:4,0:4:8.85:0,9,61	0/1:16,0:16:6.28:6,0,83	0/1:13,0:13:1.15:1,0,127	0/1:8,0:7:5.52:6,0,41	0/1:15,0:15:9.71:10,0,41	0/1:10,0:10:8.07:28,0,8	0/1:13,0:13:17.21:17,0,50	0/1:10,0:9:7.90:8,0,88	0/0:10,0:10:26.99:0,27,240	0/0:4,0:4:8.94:0,9,69	0/0:18,0:18:29.78:0,30,225	0/0:6,0:6:11.93:0,12,92	./.	1/1:10,0:10:7.12:42,7,0	1/1:7,2:9:27.04:337,27,0	0/1:7,0:7:9.92:190,0,10	1/1:13,0:13:29.96:280,30,0	1/1:3,1:4:9.01:119,9,0
chr10	20473516	.	C	CTCCTCCTCCTCT	6567.23	PASS	AB=1.000;AC=50;AF=0.926;AN=54;BaseQRankSum=-1.480;DP=298;FS=19.533;HRun=0;HaplotypeScore=92.8496;InbreedingCoeff=0.1962;MQ=66.94;MQ0=14;MQRankSum=-2.000;QD=23.62;ReadPosRankSum=3.561;VQSLOD=1.8478;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:16:38.99:1060,39,0	1/1:2,0:2:6.01:168,6,0	0/1:22,0:8:5.13:5,0,63	0/0:15,0:10:9.01:0,9,89	1/1:6,0:6:11.97:101,12,0	1/1:1,6:7:6.02:317,6,0	1/1:24,0:23:5.19:351,5,0	1/1:13,0:11:18.01:321,18,0	1/1:12,0:12:5.79:53,6,0	1/1:8,0:8:5.88:73,6,0	1/1:4,0:4:5.77:33,6,0	1/1:4,12:16:2.96:177,3,0	1/1:7,7:13:2.54:178,3,0	1/1:8,0:7:3.01:121,3,0	1/1:3,11:15:6.02:217,6,0	1/1:1,9:14:6.02:359,6,0	0/1:14,0:14:6.14:273,0,6	1/1:10,0:9:19.37:398,19,0	1/1:9,0:9:17.96:153,18,0	1/1:3,0:3:8.98:74,9,0	1/1:16,0:16:26.83:253,27,0	1/1:6,0:5:5.93:40,6,0	./.	1/1:10,0:10:8.94:215,9,0	1/1:8,0:9:15.05:581,15,0	1/1:5,0:6:12.04:460,12,0	1/1:10,0:10:20.96:308,21,0	1/1:3,0:3:9.01:277,9,0
chr10	20473522	.	C	CTCCTCT	3940.13	PASS	AB=0.877;AC=46;AF=0.852;AN=54;BaseQRankSum=-0.910;DP=263;FS=29.956;HRun=0;HaplotypeScore=64.9652;InbreedingCoeff=0.0358;MQ=60.11;MQ0=17;MQRankSum=-0.405;QD=16.02;ReadPosRankSum=1.948;VQSLOD=0.9899;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:15,0:16:0:511,0,0	1/1:1,0:2:6.01:130,6,0	0/1:21,0:7:3.81:4,0,63	0/0:12,0:7:9.01:0,9,89	1/1:6,0:7:11.96:101,12,0	1/1:6,0:6:6.02:186,6,0	1/1:6,15:20:2.71:99,3,0	0/1:12,0:10:18.56:159,0,19	1/1:10,0:10:6:53,6,0	1/1:9,0:9:11.68:92,12,0	1/1:4,0:4:5.74:33,6,0	1/1:10,0:10:2.80:81,3,0	1/1:10,0:9:2.80:100,3,0	1/1:7,0:6:3.01:99,3,0	1/1:12,0:12:5.81:126,6,0	1/1:13,0:13:6.02:169,6,0	0/1:4,9:13:29.08:96,0,29	0/1:10,0:9:17.48:201,0,17	1/1:6,0:6:17.96:153,18,0	1/1:3,0:3:8.98:74,9,0	1/1:15,0:14:29.84:292,30,0	1/1:5,0:3:5.93:40,6,0	./.	1/1:4,6:10:9.33:166,9,0	0/1:5,0:7:1.26:303,0,1	1/1:6,0:5:12.04:263,12,0	1/1:7,0:7:20.96:232,21,0	1/1:2,0:3:9.01:178,9,0
chr10	20473525	.	C	CTCT	2568.06	PASS	AB=1.000;AC=45;AF=0.833;AN=54;BaseQRankSum=-0.291;DP=237;FS=37.383;HRun=0;HaplotypeScore=56.4607;InbreedingCoeff=0.1116;MQ=47.58;MQ0=18;MQRankSum=0.291;QD=12.53;ReadPosRankSum=1.170;VQSLOD=1.3694;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:16,0:14:0.01:341,0,0	1/1:2,0:2:6.01:87,6,0	0/0:19,0:5:4.88:0,5,70	0/0:8,0:3:9.01:0,9,89	1/1:6,0:6:11.97:101,12,0	1/1:6,0:6:6.02:105,6,0	1/1:16,0:15:1.83:43,2,0	0/1:11,0:9:22.80:138,0,23	1/1:10,0:10:5.68:53,6,0	1/1:8,0:8:12.29:93,12,0	1/1:4,0:4:5.76:33,6,0	1/1:9,0:9:2.80:38,3,0	1/1:9,0:8:2.80:56,3,0	1/1:6,0:6:3.01:48,3,0	1/1:9,0:10:5.81:78,6,0	1/1:12,0:12:6.02:80,6,0	0/1:10,0:10:30.87:31,0,53	0/1:10,0:9:17.79:180,0,18	1/1:6,0:6:17.96:153,18,0	1/1:3,0:3:8.98:74,9,0	1/1:15,0:14:29.84:255,30,0	1/1:5,0:3:5.93:40,6,0	./.	1/1:8,0:8:6.82:42,7,0	0/1:6,0:6:1.36:166,0,1	1/1:6,0:5:12.04:165,12,0	1/1:7,0:7:20.95:196,21,0	1/1:3,0:3:9.01:103,9,0
chr10	20473623	.	TCCA	T	720.79	PASS	AB=1.000;AC=16;AF=0.320;AN=50;BaseQRankSum=-3.542;DP=135;FS=2.559;HRun=0;HaplotypeScore=37.6029;InbreedingCoeff=0.5137;MQ=86.70;MQ0=0;MQRankSum=-4.637;QD=14.13;ReadPosRankSum=3.870;VQSLOD=2.7079;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:9.47:0,9,97	1/1:3,0:3:1.25:3,1,0	0/0:5,0:4:12.04:0,12,242	0/0:10,0:8:17.79:0,18,324	0/1:2,0:2:0:0,0,0	./.	0/0:2,0:2:6.01:0,6,74	0/0:4,0:3:6.02:0,6,88	0/0:9,0:9:12.36:0,12,111	0/0:10,0:10:15.60:0,16,197	./.	0/1:5,0:5:1.01:1,0,56	0/0:6,0:6:3.47:0,3,26	0/0:3,0:3:6.01:0,6,71	1/1:1,5:6:8.62:91,9,0	1/1:0,8:8:15.05:222,15,0	1/1:0,10:10:15.01:208,15,0	1/1:0,9:9:21.07:324,21,0	0/0:3,0:3:4.35:0,4,27	1/1:3,0:3:1.55:4,2,0	0/0:7,0:7:5.98:0,6,46	0/1:2,0:2:0:0,0,0	0/0:2,0:2:0.47:0,0,1	0/0:4,0:4:3:0,3,25	./.	0/0:5,0:5:14.91:0,15,140	0/1:3,0:3:6.68:8,0,7	0/0:1,0:1:2.98:0,3,21
chr10	20474616	.	GT	G	5115.59	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=10.206;DP=585;FS=2.593;HRun=1;HaplotypeScore=60.8451;InbreedingCoeff=0.9959;MQ=78.34;MQ0=0;MQRankSum=-1.982;QD=33.22;ReadPosRankSum=-0.678;VQSLOD=4.3177;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,26:32:90.67:1183,91,0	1/1:1,6:7:21.03:263,21,0	0/0:17,0:17:42.03:0,42,556	0/0:14,0:13:38.84:0,39,481	1/1:0,15:15:39.13:538,39,0	0/0:27,0:26:78.18:0,78,1067	0/0:28,0:28:84.24:0,84,1145	1/1:1,18:19:51.02:554,51,0	0/0:13,0:13:39.07:0,39,483	0/0:12,0:12:33.10:0,33,445	0/0:15,0:15:45.14:0,45,613	0/0:25,0:25:69.11:0,69,922	0/0:29,0:29:87.29:0,87,1230	0/0:23,0:23:69.22:0,69,964	0/0:31,0:31:90.26:0,90,1231	0/0:21,0:21:63.20:0,63,882	0/0:34,0:34:99:0,102,1414	0/0:9,0:9:27.09:0,27,385	0/0:15,0:15:45.12:0,45,591	0/0:20,0:20:56.27:0,56,795	0/0:39,0:39:99:0,117,1613	0/0:18,0:18:51.15:0,51,704	0/0:20,0:20:59.92:0,60,735	0/0:21,0:21:63.18:0,63,863	1/1:0,19:19:51.17:710,51,0	1/1:1,22:23:23.03:737,23,0	1/1:9,20:29:63.85:965,64,0	1/1:1,9:10:14.96:165,15,0
chr10	20476082	.	CTT	C	11394.19	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=19.460;DP=696;FS=5.268;HRun=5;HaplotypeScore=116.3847;InbreedingCoeff=0.9999;MQ=79.58;MQ0=0;MQRankSum=-4.930;QD=34.84;ReadPosRankSum=2.109;VQSLOD=3.8625;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,38:43:93.21:1257,93,0	1/1:1,14:15:45.03:561,45,0	0/0:22,0:22:60.20:0,60,1024	0/0:15,0:15:36.91:0,37,503	1/1:1,24:25:54.09:711,54,0	0/0:19,0:19:57.20:0,57,1045	0/0:21,0:21:63.20:0,63,1118	1/1:5,28:33:84.25:1138,84,0	0/0:15,0:15:45.15:0,45,821	0/0:26,0:26:78.26:0,78,1401	0/0:15,0:15:45.15:0,45,819	0/0:21,0:21:60.21:0,60,1097	0/0:29,0:29:84.29:0,84,1539	0/0:19,0:19:54.19:0,54,990	1/1:4,26:30:84.15:1090,84,0	1/1:2,26:28:78.22:1070,78,0	1/1:2,33:35:99:1380,99,0	1/1:1,19:21:50.93:723,51,0	0/0:30,0:30:84.27:0,84,1475	0/0:26,0:26:72.25:0,72,1313	0/0:29,0:29:87.30:0,87,1589	0/0:23,0:23:69.24:0,69,1255	0/0:20,0:20:60.21:0,60,1096	0/0:39,0:39:99:0,117,2141	1/1:0,27:27:68.86:943,69,0	1/1:2,29:31:35.27:1158,35,0	1/1:1,24:25:60.16:818,60,0	1/1:0,14:14:39.13:546,39,0
chr10	20476278	.	AC	A	12241.05	PASS	AB=0.519;AC=23;AF=0.411;AN=56;BaseQRankSum=19.252;DP=749;FS=10.127;HRun=1;HaplotypeScore=93.2070;InbreedingCoeff=0.9273;MQ=90.02;MQ0=0;MQRankSum=-4.345;QD=38.98;ReadPosRankSum=3.792;VQSLOD=4.7989;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,28:28:78.26:1091,78,0	1/1:0,12:12:33.11:461,33,0	0/0:28,0:28:78.23:0,78,1195	0/0:29,1:30:87.32:0,87,1287	1/1:0,25:25:75.13:984,75,0	0/0:22,0:22:66.23:0,66,1053	0/0:29,0:29:87.28:0,87,1362	1/1:0,29:29:87.29:1216,87,0	0/0:31,0:31:93.29:0,93,1439	0/0:31,0:31:90.31:0,90,1439	0/0:15,0:15:45.14:0,45,694	0/0:31,0:31:93.29:0,93,1426	0/0:28,0:28:84.29:0,84,1342	0/0:28,0:28:84.13:0,84,1243	1/1:0,32:32:87.29:1216,87,0	1/1:1,26:27:30.31:1000,30,0	1/1:0,37:37:99:1422,102,0	1/1:0,28:28:84.28:1175,84,0	0/0:19,0:19:57.17:0,57,862	0/0:25,0:25:75.24:0,75,1164	0/0:33,0:33:99:0,99,1558	0/0:27,0:27:81.25:0,81,1243	0/0:16,0:16:42.14:0,42,671	0/0:42,0:42:99:0,126,2008	1/1:0,29:29:84.28:1175,84,0	0/1:2,25:27:17.69:908,0,18	1/1:0,28:28:78.26:1090,78,0	1/1:0,12:12:36.12:503,36,0
chr10	20478752	.	G	GT	7452.78	PASS	AB=0.680;AC=23;AF=0.411;AN=56;BaseQRankSum=12.766;DP=605;FS=6.812;HRun=1;HaplotypeScore=102.5225;InbreedingCoeff=0.8661;MQ=81.49;MQ0=0;MQRankSum=-7.989;QD=30.80;ReadPosRankSum=-1.922;VQSLOD=3.6629;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,18:18:48.16:719,48,0	1/1:0,7:7:15.05:225,15,0	0/0:30,0:30:83.82:0,84,1027	0/0:21,0:21:51.24:0,51,666	1/1:3,24:27:66.09:914,66,0	0/0:26,0:26:78.24:0,78,995	0/0:14,0:14:42.10:0,42,512	1/1:11,33:44:99:1631,126,0	0/0:14,0:14:42.13:0,42,534	0/0:33,0:33:99:0,99,1283	0/0:24,0:24:72.21:0,72,919	0/0:24,0:24:69.18:0,69,875	0/0:27,0:27:81.26:0,81,1050	0/0:26,0:26:78.25:0,78,1012	1/1:2,5:7:9.42:103,9,0	1/1:10,8:18:1.97:318,2,0	1/1:13,11:24:2.42:331,2,0	0/1:9,8:17:8.58:425,0,9	0/0:20,0:20:60.19:0,60,779	0/0:35,0:35:99:0,102,1309	0/0:13,0:13:39.13:0,39,506	0/0:20,0:20:60.19:0,60,779	0/0:18,0:18:54.15:0,54,685	0/0:18,0:18:54.18:0,54,701	1/1:3,20:23:57.19:841,57,0	1/1:13,9:22:56.65:736,57,0	1/1:18,10:28:78.18:1026,78,0	1/1:3,4:7:15.05:183,15,0
chr10	20478753	.	T	TTG	1169.43	PASS	AB=0.896;AC=19;AF=0.339;AN=56;BaseQRankSum=14.944;DP=619;FS=2.566;HRun=0;HaplotypeScore=139.6689;InbreedingCoeff=0.6007;MQ=81.11;MQ0=0;MQRankSum=-2.166;QD=4.68;ReadPosRankSum=-1.211;VQSLOD=3.1258;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:18:32.59:97,33,0	1/1:7,0:7:10.19:30,10,0	0/0:29,0:29:87.29:0,87,1358	0/0:22,0:22:59:0,59,867	1/1:25,0:25:49.35:194,49,0	0/0:26,0:26:78.27:0,78,1249	0/0:15,0:15:42.10:0,42,623	1/1:44,0:44:9.04:231,9,0	0/0:14,0:14:42.14:0,42,678	0/0:33,0:33:99:0,99,1580	0/0:25,0:25:72.25:0,72,1168	0/0:24,0:24:72.22:0,72,1120	0/0:28,0:28:81.28:0,81,1308	0/0:26,0:26:78.27:0,78,1270	1/1:7,0:7:8.92:49,9,0	0/1:15,5:23:6.35:158,0,6	0/1:20,6:31:27.89:137,0,28	0/1:17,0:18:33.18:175,0,33	0/0:20,0:20:60.20:0,60,974	0/0:37,0:37:99:0,102,1646	0/0:13,0:13:39.13:0,39,636	0/0:20,0:20:60.20:0,60,976	0/0:19,0:19:54.18:0,54,866	0/0:18,0:18:54.18:0,54,877	1/1:21,0:21:38.25:115,38,0	0/1:19,0:20:11.58:112,0,12	1/1:28,0:28:1.03:59,1,0	0/1:8,0:8:1.35:1,0,3
chr10	20478756	.	GGA	G	378.14	PASS	AB=0.950;AC=9;AF=0.161;AN=56;BaseQRankSum=7.994;DP=612;FS=1.606;HRun=0;HaplotypeScore=132.0095;InbreedingCoeff=0.1367;MQ=83.24;MQ0=0;MQRankSum=-1.491;QD=1.99;ReadPosRankSum=-6.197;VQSLOD=0.1660;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:18,1:19:21.13:0,21,260	0/1:9,0:9:15.32:15,0,77	0/0:30,0:30:80.86:0,81,1304	0/0:23,0:24:47.12:0,47,886	0/1:22,2:24:0.41:0,0,257	0/0:24,0:24:72.25:0,72,1311	0/0:12,0:12:36.11:0,36,619	0/1:40,2:42:12.40:165,0,12	0/0:14,0:14:42.13:0,42,687	0/0:33,0:33:96.16:0,96,1678	0/0:26,0:26:78.26:0,78,1369	0/0:24,0:24:72.22:0,72,1234	0/0:27,0:27:81.25:0,81,1395	0/0:26,0:26:78.27:0,78,1424	0/0:8,0:8:1.34:0,1,7	0/1:17,1:18:22.55:38,0,23	0/1:27,1:28:7.87:23,0,8	0/1:18,2:20:15.75:39,0,16	0/0:20,0:20:60.19:0,60,1066	0/0:38,0:38:99:0,111,1968	0/0:13,0:13:39.13:0,39,714	0/0:21,0:21:63.22:0,63,1148	0/0:19,0:19:57.18:0,57,987	0/0:19,0:19:57.18:0,57,992	0/0:17,0:17:47.04:0,47,311	0/1:18,1:19:5.53:107,0,6	1/1:29,1:30:6.34:124,6,0	0/0:8,0:8:3.68:0,4,14
chr10	20478757	.	GA	G	3592.60	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=11.320;DP=604;FS=4.946;HRun=1;HaplotypeScore=106.7203;InbreedingCoeff=0.7636;MQ=84.16;MQ0=0;MQRankSum=-6.814;QD=16.56;ReadPosRankSum=-6.474;VQSLOD=1.6116;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:19,0:19:5.43:5,0,79	0/1:9,0:9:10.23:10,0,23	0/0:30,0:30:81.23:0,81,1094	0/0:24,1:25:39.34:0,39,740	0/1:24,0:24:7.38:7,0,92	0/0:24,0:24:72.24:0,72,1053	0/0:12,0:12:36.11:0,36,508	1/1:9,32:41:99:1207,107,0	0/0:14,0:14:42.04:0,42,534	0/0:32,0:32:96.15:0,96,1348	0/0:26,0:26:78.18:0,78,1096	0/0:24,0:24:72.21:0,72,1008	0/0:27,0:27:81.23:0,81,1123	0/0:26,0:26:78.26:0,78,1140	1/1:7,0:7:3.26:8,3,0	1/1:18,0:18:24.99:216,25,0	1/1:25,0:25:21.68:155,22,0	1/1:18,0:18:15.66:167,16,0	0/0:20,0:20:60.19:0,60,858	0/0:38,0:38:99:0,114,1610	0/0:13,0:13:39.13:0,39,571	0/0:21,0:21:63.21:0,63,920	0/0:19,0:19:57.18:0,57,814	0/0:19,0:19:57.16:0,57,792	0/0:17,0:17:38.27:0,38,132	1/1:9,9:18:52.58:608,53,0	1/1:21,9:30:87.17:1043,87,0	1/1:4,4:8:15.04:166,15,0
chr10	20479112	.	AG	A	4131.27	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-6.582;DP=520;FS=0.384;HRun=7;HaplotypeScore=80.5735;InbreedingCoeff=0.9950;MQ=69.63;MQ0=1;MQRankSum=-0.798;QD=26.31;ReadPosRankSum=3.048;VQSLOD=4.2686;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,28:30:72.16:735,72,0	1/1:0,6:6:18.04:184,18,0	0/0:18,0:14:18.06:0,18,224	0/0:16,0:13:20.57:0,21,231	1/1:3,20:23:54.12:551,54,0	0/0:21,0:21:48.15:0,48,600	0/0:24,0:24:69.20:0,69,852	0/0:26,0:25:57.52:0,58,668	0/0:22,0:22:63.20:0,63,788	0/0:25,0:25:66.20:0,66,819	0/0:19,0:19:51.16:0,51,637	0/0:16,0:16:45.10:0,45,529	0/0:14,0:14:39.11:0,39,474	0/0:15,0:15:42.12:0,42,515	1/1:2,12:14:36.08:367,36,0	1/1:1,19:20:48.11:490,48,0	1/1:2,26:28:78.18:795,78,0	1/1:1,19:20:57.13:582,57,0	0/0:20,0:20:57.15:0,57,689	0/0:28,0:28:81.24:0,81,991	0/0:19,0:19:48.15:0,48,603	0/0:11,0:11:33.11:0,33,414	0/0:21,0:21:57.17:0,57,702	0/0:6,0:6:18.06:0,18,225	1/1:1,15:16:42.10:429,42,0	0/0:18,0:18:48.15:0,48,604	0/0:12,0:12:33.07:0,33,385	0/0:12,0:12:36.12:0,36,453
chr10	20479122	.	CA	C	5628.83	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=-8.917;DP=504;FS=4.381;HRun=9;HaplotypeScore=76.9556;InbreedingCoeff=0.9323;MQ=71.69;MQ0=1;MQRankSum=0.539;QD=20.93;ReadPosRankSum=0.914;VQSLOD=5.6448;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:68.19:0,68,792	0/0:10,0:10:5.75:0,6,287	0/1:18,0:11:2.23:2,0,124	0/0:19,1:16:16.82:0,17,201	0/0:23,1:24:32.66:0,33,600	1/1:2,17:19:45.02:412,45,0	1/1:6,19:25:54.02:494,54,0	0/0:20,0:19:48.13:0,48,538	1/1:3,18:21:54.03:494,54,0	1/1:4,19:23:57.01:514,57,0	1/1:1,16:17:48.02:439,48,0	1/1:5,11:16:32.05:280,32,0	1/1:1,12:13:33.02:302,33,0	1/1:2,13:15:39.02:357,39,0	0/0:13,0:13:27.07:0,27,304	0/0:20,0:20:54.15:0,54,615	0/0:25,0:25:63.19:0,63,727	0/0:20,0:20:57.17:0,57,657	1/1:3,16:19:45.01:412,45,0	1/1:2,28:30:81.04:741,81,0	1/1:5,10:15:30.01:275,30,0	1/1:2,10:12:27.01:247,27,0	1/1:1,19:20:54.03:494,54,0	1/1:0,6:6:18.01:165,18,0	0/0:16,0:16:48.14:0,48,554	0/0:17,1:18:11.64:0,12,380	0/0:10,0:10:24.07:0,24,277	0/0:12,0:12:36.11:0,36,415
chr10	20479572	.	C	CTTT	34484.24	PASS	AB=1.000;AC=50;AF=0.893;AN=56;BaseQRankSum=-3.743;DP=726;FS=10.319;HRun=2;HaplotypeScore=141.9801;InbreedingCoeff=0.5926;MQ=70.66;MQ0=0;MQRankSum=-8.109;QD=49.62;ReadPosRankSum=4.841;VQSLOD=4.1325;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,33:37:99:2058,102,0	1/1:0,17:18:45.15:942,45,0	0/0:20,0:20:27.75:0,28,687	0/0:11,0:11:26.27:0,26,344	1/1:6,14:21:56.68:1069,57,0	1/1:2,27:28:81.28:1781,81,0	1/1:5,27:35:96.33:2093,96,0	0/1:16,0:16:54.35:100,0,54	1/1:5,20:27:63.22:1348,63,0	1/1:3,19:22:66.21:1387,66,0	1/1:3,28:32:87.44:1491,87,0	1/1:5,34:40:99:2309,102,0	1/1:3,21:26:75.26:1625,75,0	1/1:1,33:36:93.32:2029,93,0	1/1:2,32:35:93.18:1928,93,0	1/1:1,34:36:90.08:1866,90,0	1/1:1,26:27:72.25:1524,72,0	1/1:1,18:19:51.18:1089,51,0	1/1:13,17:33:84.27:1688,84,0	1/1:4,11:17:42.09:765,42,0	1/1:2,24:29:66.12:1328,66,0	1/1:1,17:19:48.16:921,48,0	1/1:4,19:24:63.21:1299,63,0	1/1:2,32:35:90.31:2038,90,0	1/1:4,21:26:64.46:1304,64,0	0/1:23,0:23:58.33:181,0,58	1/1:19,0:19:12.11:272,12,0	1/1:12,0:12:5.98:46,6,0
chr10	20479574	.	T	TTC	6668.32	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=4.876;DP=691;FS=23.701;HRun=0;HaplotypeScore=222.2552;InbreedingCoeff=0.7760;MQ=71.59;MQ0=0;MQRankSum=-7.020;QD=10.10;ReadPosRankSum=6.454;VQSLOD=2.9680;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:36,0:36:49.60:205,50,0	1/1:18,0:18:28.30:110,28,0	0/0:20,0:20:9.36:0,9,608	0/0:11,0:11:5.04:0,5,252	1/1:17,0:17:22.25:121,22,0	1/1:28,0:27:57.70:284,58,0	1/1:33,0:33:49.33:311,49,0	1/1:0,13:16:41.96:493,42,0	1/1:24,0:24:25.25:198,25,0	1/1:18,0:20:41.44:235,41,0	1/1:30,0:30:44.11:351,44,0	1/1:37,0:37:25.98:220,26,0	1/1:28,0:28:19.15:283,19,0	1/1:34,0:34:67.82:315,68,0	1/1:33,0:33:41.30:145,41,0	1/1:33,0:33:46.18:172,46,0	1/1:27,0:26:39.20:129,39,0	1/1:18,0:18:27.40:80,27,0	1/1:25,0:26:68.78:449,69,0	1/1:14,0:15:17.32:185,17,0	1/1:27,0:28:9.45:208,9,0	1/1:21,0:20:37.56:217,38,0	1/1:22,0:22:26.84:211,27,0	1/1:33,0:34:61.24:282,61,0	1/1:23,0:23:6.73:48,7,0	1/1:1,4:25:65.36:751,65,0	1/1:1,2:23:44.88:583,45,0	1/1:0,0:11:6.02:83,6,0
chr10	20480606	.	TGTGTTA	T	2000.85	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=8.567;DP=602;FS=3.611;HRun=0;HaplotypeScore=135.2111;InbreedingCoeff=0.3905;MQ=71.54;MQ0=12;MQRankSum=-2.808;QD=12.35;ReadPosRankSum=-1.190;VQSLOD=2.1660;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:69.19:0,69,1353	0/0:8,0:8:14.94:0,15,185	0/0:39,0:26:53.58:0,54,1068	0/0:38,0:26:43.21:0,43,899	0/0:24,0:24:53.73:0,54,822	0/0:21,0:21:35.13:0,35,815	0/0:26,0:26:56.42:0,56,725	1/1:20,0:17:45.15:659,45,0	0/0:23,0:23:55.86:0,56,707	0/0:30,0:28:2.61:0,3,857	0/0:13,0:13:20.81:0,21,317	0/1:17,0:17:2.14:2,0,516	0/0:18,0:18:2.39:0,2,336	0/0:22,0:22:18.19:0,18,519	0/1:22,0:21:58.71:59,0,474	0/1:17,0:17:46.68:47,0,296	0/1:21,0:20:33.39:33,0,426	0/1:19,0:19:64.59:65,0,443	0/0:16,1:16:0.62:0,1,573	0/0:9,0:9:13.12:0,13,412	0/0:46,0:46:99:0,105,2159	0/0:15,0:15:24.55:0,25,455	0/0:10,0:10:26.92:0,27,390	0/0:38,0:38:41.34:0,41,932	0/0:14,0:13:28.96:0,29,389	1/1:2,21:22:59.01:905,59,0	1/1:2,15:17:17.46:325,17,0	1/1:1,5:6:3.01:70,3,0
chr10	20480610	.	TTA	T	1726.51	PASS	AB=0.985;AC=16;AF=0.286;AN=56;BaseQRankSum=6.808;DP=618;FS=17.495;HRun=0;HaplotypeScore=104.3713;InbreedingCoeff=0.2763;MQ=68.04;MQ0=12;MQRankSum=-1.541;QD=6.93;ReadPosRankSum=-4.610;VQSLOD=0.6596;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:69.19:0,69,1115	0/1:6,0:6:28.04:28,0,148	0/0:36,0:23:53.58:0,54,1068	0/0:37,0:25:43.62:0,44,909	0/0:22,0:22:51.06:0,51,627	0/0:22,0:22:24.82:0,25,819	0/0:26,0:26:42.26:0,42,802	1/1:5,16:18:30.54:660,31,0	0/0:23,1:24:49.32:0,49,788	0/1:30,0:28:7.04:7,0,920	0/0:12,0:12:20.75:0,21,341	0/1:20,0:20:56.02:56,0,501	0/0:16,0:16:32.95:0,33,420	0/0:22,0:22:7.39:0,7,642	0/0:21,0:20:38.21:0,38,581	0/0:16,0:16:33.50:0,34,483	0/1:22,0:21:48.46:48,0,439	0/1:22,0:22:12.43:12,0,566	0/1:22,0:21:10.93:11,0,513	0/0:10,0:10:14.11:0,14,352	0/0:39,11:50:97.51:0,98,1663	0/0:16,0:16:19.76:0,20,402	0/0:10,0:10:27.08:0,27,406	0/1:40,1:41:26.48:26,0,1043	0/1:17,2:17:30.74:31,0,282	1/1:22,1:22:60.17:831,60,0	1/1:16,1:17:17.94:161,18,0	1/1:6,0:6:5.21:31,5,0
chr10	20480612	.	AGTGT	A	2837.05	PASS	AB=0.838;AC=37;AF=0.685;AN=54;BaseQRankSum=3.791;DP=631;FS=3.099;HRun=0;HaplotypeScore=124.0864;InbreedingCoeff=0.0901;MQ=64.93;MQ0=13;MQRankSum=-0.914;QD=6.25;ReadPosRankSum=1.506;VQSLOD=2.7499;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:21.05:0,21,376	0/1:5,0:6:3.50:56,0,4	./.	0/0:36,0:24:0.94:0,1,2	0/1:14,1:24:27.20:27,0,54	1/1:19,0:21:6.01:69,6,0	1/1:17,10:28:15.04:213,15,0	0/0:28,0:25:21.07:0,21,267	1/1:15,10:25:26.88:377,27,0	1/1:21,2:25:20.81:228,21,0	1/1:7,5:13:3.01:47,3,0	1/1:16,2:19:0.23:157,0,0	1/1:6,7:14:11.78:168,12,0	1/1:13,7:21:23.95:302,24,0	1/1:13,0:21:12.01:112,12,0	1/1:8,0:16:14.51:141,15,0	0/1:15,0:23:34.93:35,0,37	0/1:21,0:24:23.82:130,0,24	0/1:21,1:22:13.16:13,0,118	0/1:9,0:9:34.53:35,0,104	0/0:48,1:50:36.33:0,36,674	0/1:9,7:16:39.65:41,0,40	1/1:11,1:12:3.01:47,3,0	1/1:26,15:41:42:554,42,0	0/1:17,2:19:26.57:106,0,27	0/1:24,0:23:32.90:33,0,79	1/1:17,0:17:11.48:84,11,0	1/1:6,0:6:5.18:28,5,0
chr10	20480931	.	GCCAGGC	G	2450.12	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=7.949;DP=603;FS=16.723;HRun=0;HaplotypeScore=128.6142;InbreedingCoeff=0.9446;MQ=62.30;MQ0=0;MQRankSum=-9.548;QD=32.67;ReadPosRankSum=1.018;VQSLOD=2.6452;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,40:44:72.24:1502,72,0	1/1:0,3:3:9.03:207,9,0	0/0:4,0:4:6:0,6,72	0/0:7,0:6:18.03:0,18,445	1/1:0,15:15:15.50:280,15,0	0/0:17,0:17:48.16:0,48,1542	0/0:27,0:27:75.26:0,75,2549	0/0:17,0:17:42.13:0,42,1196	0/0:18,0:18:51.18:0,51,1700	0/0:25,0:25:69.23:0,69,2185	0/0:14,0:14:39.13:0,39,1299	0/0:32,0:32:87.30:0,87,2752	0/0:23,0:23:66.23:0,66,2235	0/0:19,0:19:48.16:0,48,1537	0/0:22,0:22:60.19:0,60,1795	0/0:8,0:8:21.07:0,21,677	0/0:43,0:43:99:0,123,4142	0/0:30,0:30:81.28:0,81,2687	0/0:17,0:17:45.14:0,45,1162	0/0:10,0:10:27.09:0,27,845	0/0:73,0:73:99:0,205,6796	0/0:9,0:9:27.09:0,27,806	0/0:14,0:14:42.14:0,42,1282	0/0:43,0:43:99:0,123,4036	1/1:3,10:13:27.09:614,27,0	0/0:22,0:22:65.03:0,65,2096	0/0:28,0:28:84.27:0,84,2711	0/0:6,0:6:18.06:0,18,586
chr10	20483138	.	TGG	T	4392.70	PASS	AB=0.636;AC=51;AF=0.911;AN=56;BaseQRankSum=-5.024;DP=232;FS=48.430;HRun=10;HaplotypeScore=38.1354;InbreedingCoeff=0.4716;MQ=85.69;MQ0=1;MQRankSum=-1.857;QD=21.75;ReadPosRankSum=4.903;VQSLOD=0.4132;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,10:14:19.38:231,19,0	1/1:0,1:1:3.01:33,3,0	0/0:15,0:9:8.72:0,9,107	0/0:15,0:12:11.52:0,12,118	1/1:1,6:7:21.06:233,21,0	1/1:0,2:2:3.01:33,3,0	1/1:6,7:13:15.01:167,15,0	1/1:7,6:13:5.09:172,5,0	1/1:3,8:11:26.85:274,27,0	1/1:1,5:6:15.03:159,15,0	1/1:1,3:4:12.03:132,12,0	1/1:1,8:9:12.03:134,12,0	0/1:3,4:7:8.44:88,0,8	1/1:1,6:7:15.04:167,15,0	1/1:2,8:10:23.77:251,24,0	1/1:1,1:2:3.01:33,3,0	1/1:2,10:12:7.12:247,7,0	1/1:1,7:8:15.04:167,15,0	1/1:1,6:7:17.89:165,18,0	1/1:0,5:5:14.99:152,15,0	1/1:1,13:14:21.05:234,21,0	1/1:1,6:7:18.04:200,18,0	1/1:1,8:9:24.06:268,24,0	1/1:2,3:5:4.72:65,5,0	1/1:1,5:6:15.04:167,15,0	1/1:2,7:9:21.03:220,21,0	1/1:0,10:10:24.06:267,24,0	1/1:0,4:4:12.03:134,12,0
chr10	20483564	.	A	AG	4253.20	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-2.412;DP=703;FS=1.947;HRun=7;HaplotypeScore=74.3985;InbreedingCoeff=0.9991;MQ=81.49;MQ0=0;MQRankSum=-3.653;QD=21.16;ReadPosRankSum=3.269;VQSLOD=4.6645;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,4:34:60.35:326,60,0	1/1:2,0:11:20.13:102,20,0	0/0:25,0:25:50.09:0,50,485	0/0:21,0:19:35.85:0,36,319	1/1:2,0:31:65.95:338,66,0	0/0:17,0:17:48.06:0,48,458	0/0:29,0:29:78.12:0,78,753	0/0:34,0:34:65.93:0,66,624	0/0:27,0:27:66.09:0,66,632	0/0:23,0:23:60.09:0,60,579	0/0:22,0:22:57.08:0,57,550	0/0:38,0:38:99:0,102,964	0/0:34,0:34:96.10:0,96,915	0/0:20,0:20:57.08:0,57,544	1/1:0,29:29:81.25:978,81,0	1/1:4,15:19:39.12:471,39,0	1/1:4,28:30:69.21:834,69,0	1/1:2,29:31:84.26:1015,84,0	0/0:22,0:22:54.07:0,54,518	0/0:15,0:15:45.07:0,45,434	0/0:31,0:31:90.12:0,90,861	0/0:19,0:19:57.06:0,57,534	0/0:27,0:27:66.10:0,66,636	0/0:25,0:25:72.10:0,72,689	1/1:0,0:14:37.34:190,37,0	0/0:25,0:25:69.07:0,69,658	0/0:28,0:28:81.13:0,81,782	0/0:19,0:19:54.05:0,54,505
chr10	20483938	.	CT	C	4943.24	PASS	AB=0.946;AC=43;AF=0.768;AN=56;BaseQRankSum=-2.884;DP=549;FS=10.779;HRun=11;HaplotypeScore=73.0113;InbreedingCoeff=0.5812;MQ=66.41;MQ0=8;MQRankSum=3.447;QD=11.01;ReadPosRankSum=4.280;VQSLOD=3.2989;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:22:16.46:0,16,283	0/0:11,0:11:11.40:0,11,74	0/0:20,0:10:7.85:0,8,67	0/1:24,1:14:31.56:32,0,49	0/0:27,0:24:17.19:0,17,371	1/1:1,13:14:20.76:172,21,0	1/1:2,10:12:29.83:234,30,0	1/1:15,30:46:71.13:652,71,0	1/1:2,6:8:11.98:98,12,0	1/1:4,17:21:47.85:389,48,0	1/1:1,12:13:28.99:225,29,0	1/1:3,12:15:14.94:123,15,0	1/1:5,12:17:20.19:154,20,0	1/1:3,15:18:14.97:122,15,0	0/1:12,0:13:24.19:112,0,24	1/1:12,0:11:22.18:137,22,0	1/1:24,3:26:2.09:180,2,0	0/1:12,2:14:18.38:80,0,18	1/1:12,16:26:21:367,21,0	1/1:6,16:22:43.33:330,43,0	1/1:6,7:11:5.93:49,6,0	1/1:4,15:18:35.91:293,36,0	1/1:3,13:17:22.67:177,23,0	1/1:7,16:21:29.50:224,30,0	0/0:14,0:12:29.63:0,30,268	1/1:11,7:18:44.87:363,45,0	1/1:8,18:25:16.55:126,17,0	1/1:20,6:25:2.32:301,2,0
chr10	20483947	.	T	TTC	714.01	PASS	AB=0.927;AC=9;AF=0.161;AN=56;BaseQRankSum=-2.334;DP=561;FS=3.196;HRun=0;HaplotypeScore=99.3278;InbreedingCoeff=0.3536;MQ=59.70;MQ0=23;MQRankSum=1.388;QD=4.41;ReadPosRankSum=0.340;VQSLOD=2.4584;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:20:37.21:0,37,383	0/0:9,0:9:16.08:0,16,131	0/0:17,0:7:15.70:0,16,112	0/1:24,0:13:13.22:13,0,84	0/0:30,0:26:57.82:0,58,560	0/0:15,0:15:25.60:0,26,152	0/0:18,0:17:7.37:0,7,174	0/1:38,0:38:6.11:6,0,188	0/0:6,0:6:11.50:0,11,71	0/0:28,0:24:15.96:0,16,201	0/1:19,0:16:7.87:8,0,113	0/0:15,0:15:23.64:0,24,160	0/0:17,0:17:2.17:0,2,137	0/0:18,0:18:20.48:0,20,145	0/1:12,1:13:0.12:117,0,0	1/1:14,3:16:18.81:229,19,0	1/1:14,17:32:15.10:392,15,0	0/1:10,7:15:24.78:91,0,25	0/0:28,0:24:39.48:0,39,302	0/0:24,0:24:20.43:0,20,189	0/0:13,0:9:9.24:0,9,54	0/0:17,0:16:4.46:0,4,117	0/0:19,0:18:31.72:0,32,193	0/0:21,0:19:28.74:0,29,188	0/0:15,0:11:28.63:0,29,344	0/0:21,0:20:5.67:0,6,119	0/0:22,0:20:21.59:0,22,101	0/0:20,0:17:23.25:0,23,134
chr10	20483948	.	T	TC	355.36	PASS	AB=0.986;AC=8;AF=0.143;AN=56;BaseQRankSum=0.746;DP=560;FS=4.146;HRun=0;HaplotypeScore=91.8910;InbreedingCoeff=0.2887;MQ=59.60;MQ0=23;MQRankSum=0.314;QD=2.87;ReadPosRankSum=0.845;VQSLOD=2.4302;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:20:9.30:0,9,340	0/0:9,0:9:4.62:0,5,89	0/0:17,0:7:8.69:0,9,82	0/1:24,0:13:6.30:6,0,85	0/0:30,0:26:57.01:0,57,555	0/0:15,0:15:22.94:0,23,115	0/0:17,0:17:28.29:0,28,170	0/0:38,0:38:24.45:0,24,157	0/0:6,0:6:10.26:0,10,52	0/0:27,0:23:19.14:0,19,182	0/1:19,0:16:8.02:8,0,88	0/0:15,0:15:23.12:0,23,132	0/0:17,0:17:1.82:0,2,114	0/0:18,0:18:19.13:0,19,118	0/1:13,0:13:40.03:77,0,40	1/1:15,2:16:18.45:137,18,0	1/1:30,4:32:12.13:239,12,0	0/1:16,0:15:24.33:24,0,46	0/0:27,0:23:41.62:0,42,284	0/0:25,0:25:20.14:0,20,165	0/0:13,0:9:8.52:0,9,46	0/0:17,0:16:5:0,5,95	0/0:19,0:18:29.68:0,30,153	0/0:21,0:19:26.95:0,27,142	0/0:16,0:12:19.18:0,19,323	0/0:20,0:19:1.36:0,1,89	0/0:22,0:20:17.44:0,17,73	0/0:20,0:17:20.43:0,20,109
chr10	20484910	.	TGGAAGGAA	T	3844.95	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=-1.931;DP=558;FS=0.504;HRun=0;HaplotypeScore=169.2712;InbreedingCoeff=0.6641;MQ=64.55;MQ0=2;MQRankSum=-2.309;QD=25.98;ReadPosRankSum=1.512;VQSLOD=3.4184;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:23:18.02:147,18,0	0/1:10,0:10:54.82:55,0,81	0/0:30,0:22:27.08:0,27,473	0/0:18,0:15:26.88:0,27,573	0/1:20,0:20:99:164,0,205	0/0:22,0:22:24.08:0,24,693	0/0:21,0:21:53.04:0,53,826	1/1:11,13:24:39:700,39,0	0/0:23,0:22:24.06:0,24,590	0/0:15,0:15:29.39:0,29,499	0/0:20,0:20:24.06:0,24,495	0/0:23,0:23:33.01:0,33,802	0/0:18,0:18:24.04:0,24,625	0/0:26,0:26:36.09:0,36,759	0/0:24,0:24:57.18:0,57,1233	0/0:24,0:23:24.08:0,24,663	0/0:26,0:26:38.47:0,38,783	0/0:17,0:17:14.61:0,15,182	0/0:22,0:22:36.13:0,36,402	0/0:17,0:17:21.06:0,21,468	0/0:8,0:8:15.01:0,15,221	0/0:23,0:23:36.12:0,36,928	0/0:17,0:17:17.64:0,18,320	0/0:16,0:16:24.08:0,24,199	0/1:21,0:21:99:149,0,112	1/1:3,24:27:72.17:1687,72,0	1/1:4,14:18:30.10:786,30,0	1/1:1,4:5:6.02:157,6,0
chr10	20484928	.	GAAGGAAAGAA	G	3796.06	PASS	AB=1.000;AC=27;AF=0.482;AN=56;BaseQRankSum=-4.161;DP=584;FS=11.012;HRun=0;HaplotypeScore=170.4037;InbreedingCoeff=-0.2417;MQ=45.43;MQ0=29;MQRankSum=-3.676;QD=8.34;ReadPosRankSum=2.876;VQSLOD=2.1611;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:4,17:20:21.07:575,21,0	1/1:1,8:9:7.21:209,7,0	0/0:27,0:10:12.04:0,12,174	0/0:32,0:11:18.05:0,18,272	1/1:2,17:19:33:795,33,0	0/0:25,0:24:6.24:0,6,335	0/1:23,0:23:99:225,0,126	0/1:22,0:21:0:0,0,60	0/1:25,0:22:12.20:12,0,236	0/1:16,0:16:99:223,0,150	0/1:18,0:17:42.67:43,0,188	0/1:26,0:26:38.19:38,0,251	0/0:18,0:17:2.08:0,2,340	0/1:27,0:27:99:126,0,250	0/1:26,0:23:99:143,0,476	0/1:23,0:19:25.46:25,0,295	0/1:29,0:27:78.49:78,0,212	1/1:16,0:14:19.28:241,19,0	0/1:22,0:19:18.64:238,0,19	0/1:16,0:16:19.78:20,0,199	0/1:11,0:10:20.84:21,0,54	0/1:20,0:19:64.77:65,0,427	0/1:16,0:15:47.40:47,0,139	0/1:22,0:15:10.15:187,0,10	1/1:3,18:21:15.05:482,15,0	0/1:27,0:27:3.33:3,0,244	0/0:20,0:20:3.24:0,3,407	0/0:7,0:7:6.45:0,6,228
chr10	20484936	.	GAA	G	2023.58	PASS	AB=0.943;AC=24;AF=0.429;AN=56;BaseQRankSum=0.522;DP=589;FS=0.486;HRun=4;HaplotypeScore=120.1234;InbreedingCoeff=-0.0003;MQ=41.02;MQ0=37;MQRankSum=-1.095;QD=5.45;ReadPosRankSum=-0.704;VQSLOD=-0.5029;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:22:41.70:42,0,141	1/1:8,0:8:3.99:27,4,0	0/0:29,0:9:24.08:0,24,378	0/0:34,0:11:30.10:0,30,509	1/1:18,0:17:10.37:156,10,0	0/0:25,0:24:21.29:0,21,119	1/1:17,3:19:13.48:266,13,0	0/0:24,0:22:47.81:0,48,658	0/0:22,1:20:3.82:0,4,17	0/1:15,3:18:16.90:319,0,17	0/1:17,0:16:0.13:147,0,0	0/1:25,1:25:19.88:20,0,39	0/1:18,0:17:4.78:5,0,26	0/1:28,0:28:21.48:21,0,40	0/1:26,0:23:4.25:4,0,87	0/0:22,1:18:10.98:0,11,37	0/1:24,3:26:81.42:81,0,191	0/1:11,4:13:77.53:161,0,78	0/1:21,1:19:69.41:469,0,69	0/1:19,0:18:57.11:74,0,57	0/1:9,1:9:79.50:80,0,122	0/1:20,1:19:12.32:12,0,39	0/1:15,2:16:14.11:51,0,14	1/1:9,9:11:16.07:180,16,0	1/1:19,0:19:14.50:85,14,0	0/0:28,0:28:69.61:0,70,611	0/0:22,0:22:53.40:0,53,561	0/0:10,0:10:23.94:0,24,372
chr10	20484938	.	A	AGGAAGG	11964.22	PASS	AB=0.714;AC=32;AF=0.571;AN=56;BaseQRankSum=-1.602;DP=596;FS=2.037;HRun=0;HaplotypeScore=115.1133;InbreedingCoeff=0.2448;MQ=42.21;MQ0=38;MQRankSum=-1.744;QD=26.95;ReadPosRankSum=6.311;VQSLOD=4.0570;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:22:27.84:28,0,114	0/0:8,0:8:7.10:0,7,55	0/0:30,0:8:24.08:0,24,466	0/0:36,0:11:29.89:0,30,590	0/1:17,0:17:32.71:101,0,33	0/1:1,21:26:23.28:703,0,23	1/1:4,0:17:30.10:751,30,0	0/0:21,0:19:51.15:0,51,1049	1/1:1,20:22:18.06:675,18,0	1/1:5,1:19:39.60:864,40,0	1/1:1,14:18:27.09:741,27,0	1/1:1,22:26:23.52:795,24,0	1/1:1,12:18:20.27:597,20,0	1/1:0,20:29:24.08:773,24,0	1/1:0,0:21:45.06:481,45,0	1/1:2,19:21:5.85:660,6,0	0/1:9,17:27:99:684,0,171	0/1:7,0:12:99:335,0,101	0/1:6,0:17:67.12:966,0,67	0/1:1,14:18:49.82:483,0,50	0/1:4,0:9:99:141,0,133	1/1:2,15:19:27.09:931,27,0	1/1:2,14:17:15.02:474,15,0	0/1:13,0:13:32.39:771,0,32	0/1:19,0:19:11.53:12,0,61	0/0:25,0:25:70.48:0,70,1528	0/0:23,0:23:57.18:0,57,1254	0/0:8,0:8:24.08:0,24,595
chr10	20485031	.	G	GAA	3482.99	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-6.543;DP=612;FS=14.148;HRun=10;HaplotypeScore=72.8575;InbreedingCoeff=0.9775;MQ=68.27;MQ0=0;MQRankSum=1.664;QD=30.55;ReadPosRankSum=-1.858;VQSLOD=2.1464;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:42.07:0,42,426	0/0:13,0:13:39.09:0,39,396	0/0:12,0:11:9.04:0,9,143	0/0:13,0:14:20.78:0,21,322	0/0:37,0:37:74.12:0,74,806	0/0:24,0:24:60.10:0,60,602	0/0:20,0:20:48.02:0,48,481	1/1:5,24:34:80.69:1075,81,0	0/0:22,0:22:27.40:0,27,488	0/0:32,0:32:72.05:0,72,728	0/0:20,0:21:38.81:0,39,443	0/0:22,0:22:50.95:0,51,519	0/0:25,0:26:59.84:0,60,646	0/0:24,0:24:57.09:0,57,580	0/0:27,0:27:69.12:0,69,695	0/0:18,0:18:42.07:0,42,427	0/0:16,0:17:38.80:0,39,439	0/0:18,0:18:51.11:0,51,519	0/0:15,0:17:26.27:0,26,360	0/0:18,0:18:42.03:0,42,420	0/0:8,0:8:15:0,15,152	0/0:25,0:25:63.10:0,63,634	0/0:11,0:12:26.73:0,27,240	0/0:21,0:21:44.97:0,45,436	0/0:30,0:30:75.12:0,75,763	1/1:3,24:29:47.66:985,48,0	1/1:4,18:23:41.63:591,42,0	1/1:6,21:28:57.19:833,57,0
chr10	20485760	.	TC	T	1087.31	PASS	AB=0.559;AC=7;AF=0.125;AN=56;BaseQRankSum=5.600;DP=448;FS=1.846;HRun=9;HaplotypeScore=49.7236;InbreedingCoeff=0.7637;MQ=79.60;MQ0=0;MQRankSum=-0.573;QD=15.53;ReadPosRankSum=0.589;VQSLOD=3.5138;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:72.20:0,72,822	0/0:6,0:6:15.04:0,15,173	0/0:24,1:24:12.59:0,13,288	0/0:16,0:15:19.85:0,20,187	0/0:18,0:18:39.12:0,39,450	0/0:26,0:26:75.17:0,75,849	0/0:19,0:19:51.14:0,51,579	1/1:8,20:28:50.99:466,51,0	0/0:22,0:22:57.17:0,57,657	0/0:15,0:15:21.41:0,21,398	0/0:7,0:7:15.04:0,15,173	0/0:11,0:11:24.07:0,24,276	0/0:12,0:12:36.09:0,36,405	0/0:11,1:12:5.63:0,6,318	0/0:15,0:15:39.12:0,39,450	0/0:13,0:13:36.11:0,36,414	0/0:22,0:22:57.17:0,57,657	0/0:19,0:19:54.16:0,54,621	0/0:15,0:15:35.56:0,36,432	0/0:13,0:13:30.09:0,30,346	0/0:12,0:12:27.07:0,27,302	0/0:13,0:13:30.09:0,30,346	0/0:14,0:14:36.11:0,36,415	0/0:12,1:13:8.63:0,9,345	0/0:8,0:8:24.05:0,24,264	0/1:4,15:19:18.24:355,0,18	1/1:4,14:18:33.01:302,33,0	1/1:0,5:5:12.01:110,12,0
chr10	20487548	.	CCCA	C	3608.30	PASS	AB=0.997;AC=37;AF=0.661;AN=56;BaseQRankSum=-0.387;DP=381;FS=1.446;HRun=0;HaplotypeScore=85.8959;InbreedingCoeff=0.1196;MQ=74.94;MQ0=1;MQRankSum=-6.547;QD=11.72;ReadPosRankSum=-1.294;VQSLOD=2.7868;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,5:10:23.20:240,23,0	1/1:1,1:2:5.05:49,5,0	0/0:9,0:9:20.23:0,20,318	0/0:16,0:16:36.18:0,36,601	1/1:0,10:10:20.61:175,21,0	0/0:12,0:12:5.66:0,6,261	0/1:33,1:34:99:125,0,706	1/1:7,0:7:10.57:81,11,0	0/1:13,0:13:62.39:62,0,251	0/1:20,0:20:48.21:48,0,248	0/1:8,0:8:6.07:6,0,114	0/1:17,0:17:0.36:0,0,503	0/1:8,0:8:12.25:12,0,145	0/1:17,0:17:99:112,0,261	1/1:1,8:9:18.06:218,18,0	1/1:8,2:10:30.04:374,30,0	1/1:12,12:24:62.85:673,63,0	1/1:6,24:30:35.33:451,35,0	0/1:12,0:12:76.96:77,0,229	1/1:6,0:6:2.69:40,3,0	0/1:27,0:26:94.93:95,0,460	0/1:6,0:6:17.60:18,0,36	0/1:7,0:7:7.18:7,0,42	0/0:36,0:36:4.26:0,4,1005	1/1:1,7:8:20.28:232,20,0	1/1:13,0:13:32.40:264,32,0	1/1:6,0:6:17.98:156,18,0	1/1:4,0:4:11.94:92,12,0
chr10	20487563	.	GCCACCA	G	2983.74	PASS	AB=0.747;AC=19;AF=0.339;AN=56;BaseQRankSum=8.194;DP=410;FS=3.047;HRun=0;HaplotypeScore=118.7353;InbreedingCoeff=0.5753;MQ=69.40;MQ0=1;MQRankSum=-7.083;QD=18.53;ReadPosRankSum=0.444;VQSLOD=3.3619;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:7,0:12:12.38:255,12,0	0/1:4,0:5:2.62:16,0,3	0/0:9,0:9:17.17:0,17,454	0/0:19,0:17:21.71:0,22,592	1/1:7,0:11:7.23:106,7,0	0/0:13,0:13:33.98:0,34,957	0/0:30,0:30:75.21:0,75,2289	1/1:2,15:17:38.71:489,39,0	0/0:11,0:11:30.10:0,30,971	0/0:21,0:21:41.94:0,42,1028	0/0:7,0:7:15.02:0,15,435	0/0:19,0:19:54.19:0,54,1611	0/0:12,0:12:36.11:0,36,1027	0/0:14,0:14:30.10:0,30,949	0/1:6,0:12:10.82:283,0,11	0/1:6,0:8:8.69:104,0,9	1/1:12,0:22:3.84:374,4,0	0/1:21,0:30:0.45:327,0,0	0/0:11,0:11:30.10:0,30,1000	0/0:3,0:3:3:0,3,25	0/0:30,0:29:79.33:0,79,2188	0/0:5,0:5:8.89:0,9,154	0/0:7,0:7:4.83:0,5,107	0/0:38,0:38:99:0,108,3365	0/1:6,0:12:61.56:198,0,62	1/1:2,13:15:30.03:567,30,0	1/1:0,12:12:14.48:328,14,0	1/1:0,5:5:6.02:124,6,0
chr10	20487711	.	CG	C	7836.51	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=11.725;DP=549;FS=1.489;HRun=5;HaplotypeScore=55.6867;InbreedingCoeff=0.9904;MQ=87.26;MQ0=0;MQRankSum=-0.198;QD=29.46;ReadPosRankSum=1.338;VQSLOD=5.3199;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,120,1565	0/0:3,0:3:9.03:0,9,123	0/0:21,0:21:50.44:0,50,628	0/0:16,0:17:38:0,38,473	0/0:12,0:12:36.11:0,36,475	1/1:0,22:22:63.18:714,63,0	1/1:3,23:26:57.16:646,57,0	0/0:31,0:31:78.22:0,78,1031	1/1:0,20:20:57.16:646,57,0	1/1:2,19:21:54.10:612,54,0	1/1:0,13:13:36.10:408,36,0	1/1:3,18:21:54.15:612,54,0	1/1:0,15:15:42.12:474,42,0	1/1:0,18:18:45.13:510,45,0	0/0:26,0:26:78.26:0,78,1066	0/0:19,0:19:57.18:0,57,763	0/0:21,0:21:60.18:0,60,803	0/0:20,0:20:54.18:0,54,738	1/1:3,18:21:54.13:593,54,0	1/1:1,6:7:17.92:185,18,0	1/1:0,35:35:96.27:1089,96,0	1/1:1,8:9:27.04:292,27,0	1/1:0,13:13:30.07:340,30,0	1/1:2,23:25:63.18:714,63,0	0/0:14,0:14:39.11:0,39,502	0/0:22,1:23:26.15:0,26,722	0/0:19,0:19:57.19:0,57,773	0/0:11,0:11:33.09:0,33,433
chr10	20487844	.	G	GTA	15849.16	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=16.268;DP=706;FS=3.565;HRun=0;HaplotypeScore=114.3412;InbreedingCoeff=0.9763;MQ=91.08;MQ0=0;MQRankSum=-4.754;QD=37.74;ReadPosRankSum=1.730;VQSLOD=7.0676;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,138,1795	0/0:16,0:16:42.10:0,42,527	0/0:30,0:30:63.16:0,63,790	0/0:29,0:29:60.19:0,60,773	0/0:17,0:17:39.13:0,39,507	1/1:1,23:24:60.21:1016,60,0	1/1:4,23:27:63.22:1071,63,0	1/1:10,27:36:90.24:1443,90,0	1/1:1,18:19:48.16:816,48,0	1/1:4,22:26:69.22:1129,69,0	1/1:4,10:14:6.24:435,6,0	1/1:4,18:23:51.08:867,51,0	1/1:1,13:16:39.13:663,39,0	1/1:2,23:25:66.23:1118,66,0	0/0:37,0:37:99:0,102,1327	0/0:23,0:23:69.22:0,69,897	0/0:32,0:32:87.27:0,87,1117	0/0:27,0:27:75.23:0,75,960	1/1:7,16:23:39.13:661,39,0	1/1:2,3:5:9.01:126,9,0	1/1:1,42:43:92.97:1578,93,0	1/1:5,15:20:39.13:663,39,0	1/1:6,11:17:27.09:452,27,0	1/1:7,32:39:80.93:1377,81,0	0/0:24,0:24:63.19:0,63,806	1/1:2,20:23:63.22:1058,63,0	1/1:5,18:24:48.16:814,48,0	1/1:4,11:15:33.11:561,33,0
chr10	20488692	.	AGGGGTTGGGGATT	A	121.85	PASS	AB=1.000;AC=5;AF=0.093;AN=54;BaseQRankSum=2.946;DP=541;FS=1.400;HRun=0;HaplotypeScore=192.6460;InbreedingCoeff=0.6772;MQ=66.83;MQ0=8;MQRankSum=2.655;QD=12.18;ReadPosRankSum=-4.206;VQSLOD=1.0206;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,123,7916	0/0:8,0:8:24.08:0,24,1206	0/0:15,0:9:21.07:0,21,1256	0/0:24,0:17:30.47:0,30,2265	0/0:10,0:10:30.10:0,30,1809	0/0:24,0:24:69.24:0,69,4643	0/0:19,0:17:51.04:0,51,3124	1/1:2,5:5:15.02:192,15,0	0/0:21,0:19:57.20:0,57,3542	0/0:22,0:22:66.23:0,66,4464	0/0:14,0:14:39.13:0,39,2513	0/0:29,0:29:87.30:0,87,5215	0/0:15,0:15:45.14:0,45,2785	0/0:22,0:22:66.23:0,66,4290	0/0:24,0:24:72.23:0,72,4632	0/0:23,0:23:69.24:0,69,4272	0/0:29,0:28:81.73:0,82,4748	0/0:34,0:34:99:0,99,5826	0/0:20,0:20:60.21:0,60,3704	0/0:19,0:19:57.20:0,57,3425	0/0:21,0:21:63.22:0,63,4158	0/0:21,0:21:60.21:0,60,3766	0/0:16,0:16:48.16:0,48,3073	0/0:25,0:25:72.25:0,72,4219	0/0:35,0:35:99:0,105,6765	0/1:2,0:2:19.98:20,0,198	1/1:1,0:1:2.99:24,3,0	./.
chr10	20488778	.	GA	G	1115.62	PASS	AB=0.786;AC=34;AF=0.708;AN=48;BaseQRankSum=4.283;DP=451;FS=5.858;HRun=17;HaplotypeScore=93.7342;InbreedingCoeff=0.3776;MQ=50.07;MQ0=29;MQRankSum=3.279;QD=3.11;ReadPosRankSum=5.500;VQSLOD=0.1014;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,1:46:48.76:0,49,310	0/0:6,0:8:10.19:0,10,57	1/1:14,0:3:0.12:12,0,0	0/1:24,0:5:3.58:4,0,7	0/0:14,0:13:22.02:0,22,144	1/1:13,6:18:20.11:116,20,0	0/1:11,11:23:31.77:134,0,32	./.	0/1:6,5:10:1.43:56,0,1	0/1:13,2:16:30.23:35,0,30	1/1:14,4:18:11.28:66,11,0	1/1:16,7:24:18.68:102,19,0	1/1:9,6:15:15.95:87,16,0	1/1:10,4:15:16.42:89,16,0	1/1:4,0:13:10.17:29,10,0	1/1:11,0:20:11.99:34,12,0	1/1:12,0:29:34.33:98,34,0	1/1:13,3:26:23.79:85,24,0	0/1:8,2:11:11.62:12,0,24	1/1:11,3:14:10.86:65,11,0	1/1:6,6:13:19.15:105,19,0	1/1:10,2:13:9.14:43,9,0	1/1:9,4:12:10.23:54,10,0	0/1:15,5:20:24.25:52,0,24	0/0:14,0:21:10.07:0,10,65	./.	./.	./.
chr10	20489530	.	GA	G	4572.37	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=13.254;DP=676;FS=0.341;HRun=7;HaplotypeScore=68.8323;InbreedingCoeff=0.9999;MQ=77.05;MQ0=1;MQRankSum=-1.014;QD=25.12;ReadPosRankSum=5.168;VQSLOD=5.1378;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,39:39:99:1009,99,0	1/1:1,12:13:30.06:306,30,0	0/0:32,0:28:66.13:0,66,758	0/0:22,0:20:37.62:0,38,461	1/1:0,27:27:78.13:781,78,0	0/0:19,0:19:45.13:0,45,553	0/0:25,0:25:69.22:0,69,869	0/0:40,0:40:99:0,99,1214	0/0:16,0:16:42.12:0,42,506	0/0:24,0:24:69.21:0,69,855	0/0:20,0:20:54.16:0,54,668	0/0:28,0:28:75.18:0,75,898	0/0:20,0:20:57.15:0,57,684	0/0:25,0:25:69.20:0,69,845	1/1:2,20:22:54.12:550,54,0	1/1:2,15:17:42.09:428,42,0	1/1:2,17:19:39.09:397,39,0	1/1:1,22:23:63.14:642,63,0	0/0:23,0:23:63.19:0,63,780	0/0:29,0:29:63.23:0,63,906	0/0:17,0:17:42.10:0,42,499	0/0:27,0:27:69.22:0,69,866	0/0:26,0:26:66.20:0,66,813	0/0:30,0:30:81.23:0,81,993	1/1:0,22:22:45.10:459,45,0	0/0:31,0:31:84.26:0,84,1048	0/0:20,0:20:57.16:0,57,695	0/0:20,0:20:60.14:0,60,713
chr10	20489910	.	A	AG	17825.11	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-15.645;DP=696;FS=13.251;HRun=2;HaplotypeScore=61.5109;InbreedingCoeff=1.0000;MQ=85.53;MQ0=0;MQRankSum=-3.882;QD=39.88;ReadPosRankSum=2.522;VQSLOD=4.1830;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,40:42:99:1469,102,0	1/1:0,11:11:33.11:474,33,0	0/0:26,0:26:78.24:0,78,962	0/0:17,0:17:45.14:0,45,554	1/1:1,26:27:78.26:1113,78,0	1/1:0,14:14:42.14:605,42,0	1/1:0,22:22:63.21:907,63,0	0/0:30,0:30:87.27:0,87,1069	1/1:1,20:21:60.20:862,60,0	1/1:1,27:28:81.26:1145,81,0	1/1:1,18:19:48.16:691,48,0	1/1:0,25:25:72.24:1037,72,0	1/1:0,31:31:90.30:1290,90,0	1/1:0,22:22:60.20:863,60,0	0/0:30,0:29:90.28:0,90,1116	0/0:21,0:21:60.19:0,60,744	0/0:34,0:34:96.30:0,96,1187	0/0:22,0:22:60.17:0,60,730	1/1:1,15:16:45.08:587,45,0	1/1:0,28:28:75.25:1080,75,0	1/1:1,22:23:63.17:906,63,0	1/1:0,28:28:75.25:1080,75,0	1/1:0,26:26:75.25:1079,75,0	1/1:0,28:28:81.27:1166,81,0	1/1:2,34:36:99:1469,102,0	0/0:25,0:25:66.21:0,66,818	0/0:24,0:24:69.22:0,69,854	0/0:20,0:20:60.16:0,60,717
chr10	20490321	.	C	CT	2029.82	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=9.254;DP=539;FS=1.750;HRun=1;HaplotypeScore=75.3325;InbreedingCoeff=0.8577;MQ=77.45;MQ0=0;MQRankSum=-3.733;QD=28.19;ReadPosRankSum=-4.072;VQSLOD=2.3630;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,105,1340	0/0:10,0:10:27.09:0,27,350	0/0:13,0:13:14.46:0,14,272	0/1:12,0:12:8.75:9,0,235	0/0:19,0:19:57.19:0,57,739	0/0:17,0:17:48.16:0,48,621	0/0:29,0:29:78.25:0,78,1013	1/1:3,17:20:57.15:809,57,0	0/0:11,0:11:33.11:0,33,428	0/0:22,0:22:60.19:0,60,768	0/0:7,0:7:21.07:0,21,272	0/0:21,0:21:60.19:0,60,778	0/0:10,0:10:30.10:0,30,389	0/0:20,0:20:60.20:0,60,779	0/0:16,0:16:48.14:0,48,609	0/0:13,0:13:39.13:0,39,506	0/0:43,0:43:99:0,126,1635	0/0:49,0:49:99:0,138,1790	0/0:17,0:17:48.16:0,48,623	0/0:13,0:13:33.11:0,33,428	0/0:24,0:24:72.17:0,72,899	0/0:8,0:8:24.06:0,24,295	0/0:7,0:7:18.06:0,18,234	0/0:37,0:37:99:0,111,1423	0/0:24,0:24:69.19:0,69,866	1/1:4,13:18:39.13:583,39,0	1/1:3,13:16:48.09:654,48,0	1/1:0,6:6:9.03:135,9,0
chr10	20495083	.	T	TC	117.84	PASS	AC=10;AF=0.833;AN=12;BaseQRankSum=0.742;DP=58;FS=0.000;HRun=3;HaplotypeScore=6.1405;MQ=13.03;MQ0=40;MQRankSum=0.742;QD=5.61;ReadPosRankSum=-0.742;VQSLOD=-0.0003;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	1/1:1,1:1:3.01:34,3,0	./.	./.	./.	./.	1/1:1,2:2:6.02:82,6,0	1/1:5,1:2:3.01:40,3,0	./.	./.	./.	./.	./.	./.	./.	1/1:7,1:3:2.49:33,2,0	./.	./.	./.	./.	./.	./.	./.	./.	./.	0/0:2,0:1:3.01:0,3,42	1/1:2,0:1:0.89:2,1,0	./.
chr10	20497309	.	A	ACT	5762.71	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-1.685;DP=790;FS=0.373;HRun=0;HaplotypeScore=100.5045;InbreedingCoeff=0.9999;MQ=89.48;MQ0=0;MQRankSum=-1.302;QD=45.74;ReadPosRankSum=3.280;VQSLOD=6.0982;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,141,1878	0/0:13,0:13:39.13:0,39,519	0/0:26,0:26:54.17:0,54,705	0/0:32,0:32:40.97:0,41,814	0/0:15,0:15:36.12:0,36,479	0/0:23,0:23:63.21:0,63,838	0/0:32,0:32:81.25:0,81,1062	0/0:31,0:31:81.26:0,81,1064	0/0:23,0:23:66.22:0,66,878	0/0:25,0:25:63.21:0,63,838	0/0:18,0:18:42.12:0,42,544	0/0:33,0:33:93.29:0,93,1223	0/0:35,0:35:99:0,99,1317	0/0:33,0:33:90.28:0,90,1182	1/1:2,33:35:93.32:1611,93,0	1/1:3,33:36:96.33:1663,96,0	1/1:3,24:27:72.25:1241,72,0	1/1:2,25:28:72.25:1247,72,0	0/0:27,0:27:66.19:0,66,857	0/0:14,0:14:39.13:0,39,519	0/0:66,0:66:99:0,181,2377	0/0:29,0:29:78.25:0,78,1022	0/0:17,0:17:42.12:0,42,544	0/0:25,0:25:66.17:0,66,859	0/0:19,0:19:51.17:0,51,677	0/0:27,0:27:72.23:0,72,943	0/0:36,0:36:93.31:0,93,1238	0/0:15,0:15:42.14:0,42,558
chr10	20499392	.	CAA	C	7310.96	PASS	AB=0.727;AC=38;AF=0.679;AN=56;BaseQRankSum=-12.084;DP=546;FS=0.383;HRun=13;HaplotypeScore=98.7966;InbreedingCoeff=0.8715;MQ=68.32;MQ0=0;MQRankSum=-0.128;QD=19.55;ReadPosRankSum=0.620;VQSLOD=4.2523;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:6,3:37:7.92:8,0,175	0/0:2,0:11:19.96:0,20,69	0/0:10,0:9:16.79:0,17,140	0/1:9,0:10:3.26:3,0,161	0/0:10,0:26:41.39:0,41,195	1/1:1,11:13:23.97:282,24,0	1/1:1,16:19:53.57:489,54,0	1/1:7,22:29:64.28:614,64,0	1/1:1,17:18:45.07:436,45,0	1/1:3,24:27:70.86:668,71,0	1/1:3,11:14:24.93:219,25,0	1/1:3,16:19:45.05:436,45,0	1/1:1,12:13:33.05:320,33,0	1/1:3,15:18:39.04:378,39,0	0/0:4,0:23:36.02:0,36,340	0/0:3,0:18:30.01:0,30,278	0/0:6,0:31:45.07:0,45,439	0/0:7,0:29:39.01:0,39,401	1/1:7,9:16:26.98:257,27,0	1/1:1,12:13:26.97:262,27,0	1/1:2,13:16:35.64:330,36,0	1/1:2,18:21:50.76:477,51,0	1/1:1,12:13:36.05:349,36,0	1/1:4,12:16:36:349,36,0	0/0:4,0:22:48.42:0,48,197	1/1:4,21:25:63.06:605,63,0	1/1:2,22:25:62.79:594,63,0	1/1:3,9:12:23.97:233,24,0
chr10	20500327	.	C	CT	15093.41	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-3.460;DP=778;FS=1.906;HRun=1;HaplotypeScore=122.5042;InbreedingCoeff=0.9988;MQ=62.02;MQ0=2;MQRankSum=-0.987;QD=39.41;ReadPosRankSum=4.743;VQSLOD=4.4440;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,120,1558	0/0:10,0:10:30.10:0,30,390	0/0:34,0:25:72.20:0,72,904	0/0:29,0:24:58.41:0,58,718	0/0:19,0:19:54.15:0,54,686	1/1:2,22:24:63.21:944,63,0	1/1:2,21:23:66.19:965,66,0	0/0:32,0:32:96.29:0,96,1220	1/1:1,24:25:60.20:900,60,0	1/1:2,23:25:66.18:946,66,0	1/1:1,6:7:18.06:270,18,0	1/1:1,37:38:93.32:1395,93,0	1/1:1,32:33:84.28:1259,84,0	1/1:0,36:36:99:1484,99,0	0/0:42,0:42:99:0,120,1529	0/0:33,0:33:99:0,99,1284	0/0:41,0:41:99:0,117,1519	0/0:37,0:37:99:0,102,1324	1/1:4,15:18:45.14:640,45,0	1/1:0,27:27:78.26:1169,78,0	1/1:1,46:46:99:1933,129,0	1/1:3,18:20:54.15:785,54,0	1/1:0,19:19:57.14:828,57,0	1/1:0,39:39:99:1574,105,0	0/0:22,0:22:63.20:0,63,818	0/0:25,0:25:75.24:0,75,974	0/0:19,0:19:48.16:0,48,623	0/0:10,0:10:30.07:0,30,372
chr10	20501289	.	C	CG	15281.62	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-5.620;DP=729;FS=0.966;HRun=6;HaplotypeScore=84.4291;InbreedingCoeff=0.9983;MQ=82.72;MQ0=0;MQRankSum=-1.870;QD=31.70;ReadPosRankSum=-1.250;VQSLOD=4.5030;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,102,1032	0/0:10,0:10:21.04:0,21,214	0/0:19,0:19:44.68:0,45,433	0/0:23,0:23:54.06:0,54,532	0/0:21,0:21:57.13:0,57,581	1/1:3,19:22:54.17:679,54,0	1/1:5,46:51:99:1623,129,0	1/1:3,17:20:45.10:525,45,0	1/1:1,25:26:66.21:829,66,0	1/1:3,17:20:45.12:550,45,0	1/1:1,9:10:21.07:264,21,0	1/1:2,23:25:66.21:830,66,0	1/1:3,32:35:93.26:1149,93,0	1/1:2,29:31:75.24:943,75,0	0/0:24,0:24:66.14:0,66,666	0/0:17,0:17:42.09:0,42,429	0/0:29,0:29:75.17:0,75,765	0/0:39,0:39:99:0,111,1126	1/1:3,19:22:57.17:703,57,0	1/1:2,14:16:45.14:558,45,0	1/1:5,52:57:99:1924,153,0	1/1:2,16:18:42.13:528,42,0	1/1:1,11:12:23.55:301,24,0	1/1:2,41:43:99:1472,117,0	0/0:25,0:25:72.16:0,72,734	1/1:3,28:31:81.22:988,81,0	1/1:3,29:32:87.24:1077,87,0	1/1:0,11:11:27.09:340,27,0
chr10	20502565	.	TAG	T	11942.95	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=9.275;DP=618;FS=3.077;HRun=0;HaplotypeScore=133.9092;InbreedingCoeff=0.9974;MQ=79.75;MQ0=0;MQRankSum=-3.106;QD=36.30;ReadPosRankSum=2.407;VQSLOD=6.8993;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:87.30:0,87,1520	0/0:7,0:7:18.06:0,18,309	0/0:21,0:21:51.65:0,52,866	0/0:14,0:14:37.48:0,37,624	0/0:15,0:15:39.12:0,39,656	1/1:0,9:9:24.08:325,24,0	1/1:2,26:28:75.25:1015,75,0	0/0:21,0:21:51.17:0,51,889	1/1:1,26:27:78.26:1055,78,0	1/1:0,16:16:48.16:648,48,0	1/1:0,10:10:24.08:325,24,0	1/1:3,34:37:95.66:1297,96,0	1/1:2,19:21:54.18:730,54,0	1/1:2,27:29:69.23:929,69,0	0/0:32,0:32:87.30:0,87,1521	0/0:20,0:20:57.18:0,57,958	0/0:30,0:30:84.29:0,84,1462	0/0:31,0:31:78.27:0,78,1362	1/1:3,16:19:51.14:668,51,0	1/1:0,17:17:51.17:690,51,0	1/1:1,60:61:99:2395,178,0	1/1:1,11:12:30.10:406,30,0	1/1:4,9:13:23.77:324,24,0	1/1:0,30:30:84.28:1136,84,0	0/0:24,0:24:57.18:0,57,965	0/0:17,0:17:48.12:0,48,801	0/0:15,0:15:45.12:0,45,710	0/0:8,0:8:21.07:0,21,367
chr10	20502651	.	TCCC	T	4607.32	PASS	AB=0.512;AC=17;AF=0.304;AN=56;BaseQRankSum=-7.309;DP=574;FS=14.050;HRun=11;HaplotypeScore=142.9005;InbreedingCoeff=0.8852;MQ=67.56;MQ0=0;MQRankSum=-1.744;QD=24.25;ReadPosRankSum=3.972;VQSLOD=2.0486;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,31:35:77.81:1019,78,0	1/1:2,10:12:17.83:236,18,0	0/0:24,0:20:10.03:0,10,416	0/0:17,0:11:14.39:0,14,154	1/1:1,15:16:24.07:315,24,0	0/0:7,0:14:23.94:0,24,193	0/0:10,0:33:66.23:0,66,508	1/1:9,13:22:33.04:417,33,0	0/0:7,0:14:36.78:0,37,333	0/0:6,0:13:29.92:0,30,254	0/0:11,0:13:8.99:0,9,92	0/0:13,0:17:35.98:0,36,395	0/0:12,0:20:47.13:0,47,414	0/0:15,0:28:71.56:0,72,595	0/1:1,1:21:16.48:16,0,20	0/0:4,0:20:20.44:0,20,63	0/0:4,0:30:23.78:0,24,53	0/0:3,0:27:21.18:0,21,46	0/0:5,0:16:34.09:0,34,252	0/0:13,0:17:29.89:0,30,260	0/0:19,0:37:77.81:0,78,674	0/0:7,0:10:20.94:0,21,185	0/0:4,0:6:9:0,9,95	0/0:13,0:25:58.54:0,59,481	1/1:0,21:21:54.18:709,54,0	1/1:1,17:19:49.64:634,50,0	1/1:2,23:25:54.12:709,54,0	1/1:2,17:19:42.13:552,42,0
chr10	20503232	.	TCA	T	22176.07	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=13.712;DP=701;FS=3.070;HRun=0;HaplotypeScore=115.2890;InbreedingCoeff=0.9928;MQ=94.77;MQ0=5;MQRankSum=-7.598;QD=44.09;ReadPosRankSum=3.834;VQSLOD=6.2586;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,36:36:90.31:1468,90,0	1/1:0,4:4:12.04:194,12,0	0/0:37,0:37:89.45:0,89,1874	0/0:34,0:34:98.77:0,99,1706	1/1:0,26:26:75.26:1223,75,0	1/1:0,31:31:87.30:1419,87,0	1/1:0,32:32:81.28:1321,81,0	1/1:0,24:24:69.20:1067,69,0	1/1:0,22:22:60.20:979,60,0	1/1:0,26:26:78.24:1242,78,0	1/1:0,13:13:30.10:489,30,0	1/1:0,21:21:60.20:979,60,0	1/1:1,26:27:69.22:1112,69,0	1/1:0,24:24:63.22:1028,63,0	0/0:41,0:41:99:0,123,2499	0/0:32,0:32:96.33:0,96,1921	0/0:29,0:29:87.27:0,87,1711	0/0:25,0:25:75.24:0,75,1440	1/1:0,26:26:78.23:1221,78,0	1/1:0,16:15:33.11:537,33,0	1/1:0,19:19:48.16:783,48,0	1/1:0,23:22:60.20:978,60,0	1/1:0,17:17:51.17:832,51,0	1/1:0,31:30:84.29:1370,84,0	1/1:1,19:20:54.18:880,54,0	1/1:0,24:23:69.23:1099,69,0	1/1:0,33:33:99:1615,99,0	1/1:1,7:7:21.07:343,21,0
chr10	20505214	.	GCT	G	24211.32	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=2.722;DP=679;FS=12.975;HRun=0;HaplotypeScore=175.5052;InbreedingCoeff=0.9995;MQ=59.79;MQ0=3;MQRankSum=-9.459;QD=37.89;ReadPosRankSum=4.491;VQSLOD=5.1241;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,35:37:96.28:1321,96,0	1/1:0,13:13:39.13:546,39,0	0/0:27,0:27:65.91:0,66,1075	0/0:13,0:12:36.12:0,36,583	1/1:3,24:27:72.24:1005,72,0	1/1:0,15:15:45.15:630,45,0	1/1:4,31:35:96.32:1343,96,0	1/1:4,24:28:75.24:1035,75,0	1/1:3,21:24:69.21:948,69,0	1/1:5,31:35:90.30:1260,90,0	1/1:3,19:22:63.19:848,63,0	1/1:4,20:24:60.20:839,60,0	1/1:1,32:33:96.32:1343,96,0	1/1:1,17:18:54.18:751,54,0	1/1:5,22:27:69.23:965,69,0	1/1:4,33:37:99:1476,108,0	1/1:0,27:27:72.24:1007,72,0	1/1:1,10:11:30.10:419,30,0	1/1:3,19:22:57.19:798,57,0	1/1:1,28:28:84.28:1175,84,0	1/1:4,13:17:39.13:538,39,0	1/1:0,27:27:75.25:1048,75,0	1/1:2,24:26:75.25:1049,75,0	1/1:1,23:24:62.95:879,63,0	1/1:7,16:23:57.19:798,57,0	1/1:2,16:18:54.17:741,54,0	1/1:5,21:26:72.22:989,72,0	1/1:2,11:11:33.11:461,33,0
chr10	20505237	.	GT	G	17111.87	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=6.011;DP=684;FS=4.638;HRun=5;HaplotypeScore=205.0183;InbreedingCoeff=0.9990;MQ=62.05;MQ0=0;MQRankSum=-8.872;QD=26.53;ReadPosRankSum=4.148;VQSLOD=2.2891;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,30:38:78.18:840,78,0	1/1:2,15:17:42.11:460,42,0	0/0:22,0:22:46.07:0,46,584	0/0:17,0:17:33.18:0,33,554	1/1:5,22:27:54.14:591,54,0	1/1:4,9:13:33.09:361,33,0	1/1:6,26:32:75.20:819,75,0	1/1:5,29:34:81.16:878,81,0	1/1:4,18:22:57.15:623,57,0	1/1:6,26:32:72.66:788,73,0	1/1:2,26:28:69.18:755,69,0	1/1:2,24:26:66.18:722,66,0	1/1:3,25:28:75.19:813,75,0	1/1:2,21:23:60.16:653,60,0	1/1:1,29:30:87.24:952,87,0	1/1:1,32:33:96.26:1047,96,0	1/1:8,21:29:57.15:616,57,0	1/1:3,10:13:30.08:328,30,0	1/1:4,14:18:45.12:493,45,0	1/1:3,26:29:81.22:886,81,0	1/1:3,17:20:30.07:327,30,0	1/1:4,28:32:72.19:788,72,0	1/1:3,24:27:66.18:722,66,0	1/1:4,18:22:45.11:486,45,0	1/1:1,18:19:54.15:591,54,0	1/1:2,20:22:60.16:655,60,0	1/1:3,17:20:51.14:557,51,0	1/1:0,11:11:33.09:361,33,0
chr10	20506697	.	TTGTC	T	4206.17	PASS	AB=0.889;AC=17;AF=0.304;AN=56;BaseQRankSum=11.719;DP=600;FS=0.756;HRun=0;HaplotypeScore=130.2253;InbreedingCoeff=0.7533;MQ=73.88;MQ0=3;MQRankSum=-5.886;QD=17.90;ReadPosRankSum=-2.094;VQSLOD=3.1636;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:31,1:32:42.66:499,43,0	1/1:7,0:7:11.26:118,11,0	0/1:33,0:26:29.28:29,0,822	0/0:25,0:18:16.96:0,17,510	1/1:26,0:26:45.47:428,45,0	0/0:24,0:24:63.16:0,63,1507	0/0:15,0:15:42.13:0,42,1025	1/1:17,18:35:77.75:1184,78,0	0/0:21,0:21:50.51:0,51,1165	0/0:19,0:19:50.54:0,51,1148	0/0:25,1:26:69.18:0,69,1618	0/0:21,0:21:43.62:0,44,1067	0/0:17,0:17:48.16:0,48,1066	0/1:19,0:18:5.91:6,0,730	0/0:15,0:15:42.13:0,42,993	0/0:21,0:21:54.14:0,54,1223	0/0:29,0:29:72.34:0,72,1862	0/0:24,0:24:63.15:0,63,1429	0/0:27,0:26:73.04:0,73,1591	0/0:17,0:17:45.15:0,45,920	0/0:10,0:10:27.09:0,27,590	0/0:21,0:21:57.17:0,57,1348	0/0:20,0:20:57.17:0,57,1236	0/0:13,0:13:36.11:0,36,852	1/1:28,1:28:48.82:492,49,0	0/1:13,13:26:99:517,0,221	1/1:13,2:14:35.68:447,36,0	1/1:1,11:12:20.93:485,21,0
chr10	20506698	.	TGTC	T	4790.52	PASS	AB=0.953;AC=17;AF=0.304;AN=56;BaseQRankSum=12.279;DP=588;FS=5.587;HRun=0;HaplotypeScore=115.4835;InbreedingCoeff=0.7580;MQ=75.55;MQ0=3;MQRankSum=-8.075;QD=20.74;ReadPosRankSum=-1.951;VQSLOD=4.2499;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,27:32:63.13:1015,63,0	1/1:1,5:6:14.72:218,15,0	0/1:31,2:27:63.17:63,0,882	0/0:23,0:18:30.58:0,31,514	1/1:4,18:26:74.66:826,75,0	0/0:23,0:23:63.16:0,63,1315	0/0:15,0:15:42.12:0,42,881	1/1:31,3:34:30.73:792,31,0	0/0:21,0:21:39:0,39,1001	0/0:18,0:18:54.14:0,54,1063	0/0:25,0:25:69.18:0,69,1409	0/0:21,0:21:53.55:0,54,968	0/0:17,0:17:51.16:0,51,925	0/1:18,0:18:6.08:6,0,621	0/0:14,0:14:42.14:0,42,863	0/0:20,0:20:54.10:0,54,1043	0/0:28,0:29:59.45:0,59,1597	0/0:23,0:23:63.15:0,63,1230	0/0:27,0:26:78.20:0,78,1469	0/0:16,0:16:45.14:0,45,828	0/0:10,0:10:27.09:0,27,528	0/0:21,0:21:57.16:0,57,1176	0/0:20,0:20:57.17:0,57,1085	0/0:14,0:14:39.11:0,39,776	1/1:2,25:27:54.17:920,54,0	0/1:25,1:26:99:330,0,221	1/1:13,1:14:24.92:302,25,0	1/1:11,1:12:30.04:318,30,0
chr10	20506700	.	TC	T	877.89	PASS	AB=0.947;AC=12;AF=0.214;AN=56;BaseQRankSum=14.335;DP=576;FS=1.304;HRun=1;HaplotypeScore=105.2467;InbreedingCoeff=0.5037;MQ=77.36;MQ0=3;MQRankSum=-8.852;QD=4.99;ReadPosRankSum=1.717;VQSLOD=0.6061;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:31,1:32:8.85:222,9,0	1/1:6,0:6:6.86:57,7,0	0/0:32,0:27:10.81:0,11,763	0/0:24,0:19:47.62:0,48,540	0/1:22,4:26:26.33:197,0,26	0/0:21,0:21:63.21:0,63,1002	0/0:16,0:16:48.16:0,48,758	0/1:34,0:34:99:192,0,152	0/0:22,0:22:57.69:0,58,865	0/0:18,0:18:54.18:0,54,843	0/0:25,0:25:66.22:0,66,1053	0/0:18,0:18:50.60:0,51,776	0/0:17,0:17:50.65:0,51,705	0/0:14,0:14:34.61:0,35,527	0/0:14,0:14:42.14:0,42,664	0/0:19,0:19:57.09:0,57,842	0/0:28,0:28:62.91:0,63,1255	0/0:22,0:22:60.18:0,60,929	0/0:29,0:28:84.28:0,84,1315	0/0:18,0:18:51.17:0,51,806	0/0:9,0:9:27.09:0,27,428	0/0:20,0:20:60.19:0,60,926	0/0:19,0:19:54.18:0,54,858	0/0:14,0:14:40.02:0,40,615	1/1:27,1:27:36.17:233,36,0	0/1:26,0:26:31.51:32,0,291	0/1:11,0:12:27.89:43,0,28	1/1:12,0:12:5.98:66,6,0
chr10	20506701	.	CTTGTT	C	4349.96	PASS	AB=0.966;AC=16;AF=0.286;AN=56;BaseQRankSum=11.068;DP=582;FS=7.053;HRun=0;HaplotypeScore=139.2121;InbreedingCoeff=0.8489;MQ=74.95;MQ0=3;MQRankSum=-9.153;QD=21.12;ReadPosRankSum=-0.809;VQSLOD=4.1407;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:33,2:35:65.83:712,66,0	1/1:8,0:8:14.58:154,15,0	0/0:30,0:24:37.87:0,38,1091	0/1:23,0:19:2.81:3,0,704	1/1:25,1:26:44.75:521,45,0	0/0:21,0:21:57.20:0,57,1678	0/0:16,0:16:48.16:0,48,1339	1/1:27,7:34:78.24:1208,78,0	0/0:22,0:22:54.15:0,54,1378	0/0:18,0:18:39.13:0,39,1163	0/0:24,0:24:60.21:0,60,1777	0/0:18,0:18:51.17:0,51,1406	0/0:17,0:17:51.18:0,51,1417	0/0:16,0:16:42.13:0,42,994	0/0:16,0:16:45.14:0,45,1213	0/0:19,0:19:54.18:0,54,1530	0/0:29,0:29:81.26:0,81,2205	0/0:21,0:21:60.16:0,60,1693	0/0:30,0:29:69.23:0,69,1748	0/0:18,0:18:42.14:0,42,1113	0/0:9,0:9:27.09:0,27,757	0/0:19,0:19:54.19:0,54,1577	0/0:19,0:19:51.17:0,51,1477	0/0:14,0:14:42.14:0,42,1169	1/1:29,0:28:53.45:530,53,0	0/1:25,2:27:99:532,0,306	1/1:7,4:11:21.41:285,21,0	1/1:12,0:12:27.09:404,27,0
chr10	20507748	.	TTG	T	14501.97	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-7.689;DP=748;FS=14.488;HRun=0;HaplotypeScore=112.7802;InbreedingCoeff=0.9709;MQ=59.60;MQ0=8;MQRankSum=0.785;QD=23.89;ReadPosRankSum=3.506;VQSLOD=5.1045;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,35:47:81.08:1184,81,0	1/1:5,7:13:20.90:231,21,0	0/0:26,0:8:17.82:0,18,226	0/0:22,0:8:9.31:0,9,104	1/1:4,20:25:56.83:654,57,0	1/1:6,16:23:44.97:521,45,0	1/1:9,29:39:75.06:883,75,0	0/0:13,0:27:51.01:0,51,492	1/1:6,23:29:63.19:760,63,0	1/1:7,30:37:93.24:1106,93,0	1/1:1,17:18:42.09:490,42,0	1/1:11,19:31:53.66:585,54,0	1/1:10,22:33:54:629,54,0	1/1:8,27:35:72.22:868,72,0	1/1:27,0:27:63.18:742,63,0	1/1:28,0:27:56.56:679,57,0	1/1:32,0:32:62.88:705,63,0	1/1:25,0:25:8.11:469,8,0	1/1:6,15:22:47.91:506,48,0	1/1:5,9:15:26.91:303,27,0	1/1:7,18:26:50.99:593,51,0	1/1:2,30:33:74.86:879,75,0	1/1:5,10:16:32.93:376,33,0	1/1:7,30:37:78.24:941,78,0	1/1:2,12:14:33.10:398,33,0	0/0:7,0:29:75.01:0,75,738	0/0:8,0:27:51.01:0,51,492	0/0:2,0:10:21.02:0,21,228
chr10	20507766	.	GT	G	976.81	PASS	AB=0.628;AC=5;AF=0.089;AN=56;BaseQRankSum=8.962;DP=762;FS=1.644;HRun=1;HaplotypeScore=150.5528;InbreedingCoeff=0.3364;MQ=60.58;MQ0=9;MQRankSum=-0.130;QD=8.96;ReadPosRankSum=4.373;VQSLOD=1.4689;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:69.09:0,69,446	0/0:14,0:14:26.42:0,26,247	0/0:37,0:12:32.96:0,33,376	0/0:33,0:17:42.51:0,43,469	0/0:25,0:25:33.53:0,34,175	0/0:20,0:19:24.35:0,24,117	0/0:40,0:40:57.66:0,58,397	0/0:22,0:22:66.08:0,66,685	0/0:28,0:28:41.20:0,41,234	0/0:39,0:39:55.44:0,55,312	0/0:22,0:22:34.20:0,34,245	0/0:27,0:26:36.39:0,36,239	0/0:32,0:32:43.12:0,43,302	0/0:31,0:31:41.94:0,42,219	0/1:17,19:36:99:269,0,158	0/1:8,16:24:36.62:264,0,37	1/1:7,19:27:23.79:352,24,0	0/1:9,13:22:56.54:215,0,57	0/0:21,0:20:32.43:0,32,219	0/0:16,0:16:28.91:0,29,253	0/0:34,0:34:62.96:0,63,580	0/0:33,0:33:40.03:0,40,185	0/0:16,0:16:22.01:0,22,143	0/0:35,0:35:44.43:0,44,225	0/0:14,0:14:19.71:0,20,94	0/0:31,0:31:93.09:0,93,968	0/0:27,0:27:66.06:0,66,678	0/0:10,0:10:21.02:0,21,227
chr10	20507768	.	GC	G	972.79	PASS	AB=0.618;AC=5;AF=0.089;AN=56;BaseQRankSum=9.166;DP=769;FS=0.000;HRun=1;HaplotypeScore=150.8816;InbreedingCoeff=0.4378;MQ=60.66;MQ0=9;MQRankSum=0.248;QD=9.09;ReadPosRankSum=4.391;VQSLOD=1.1747;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,132,1366	0/0:14,0:14:39.08:0,39,480	0/0:38,0:13:32.97:0,33,375	0/0:33,0:17:41.54:0,42,437	0/0:26,0:26:61.20:0,61,619	0/0:20,0:19:50.83:0,51,487	0/0:40,0:40:99:0,105,1169	0/0:20,0:20:59.86:0,60,638	0/0:28,0:28:78.01:0,78,792	0/0:42,0:42:99:0,114,1260	0/0:22,0:22:57.10:0,57,631	0/0:27,0:26:69.10:0,69,734	0/0:32,0:32:75.09:0,75,818	0/0:31,0:31:84.09:0,84,847	0/1:17,19:36:99:285,0,130	0/1:8,16:24:9.27:264,0,9	1/1:6,19:26:28.83:346,29,0	0/1:7,13:21:6.01:202,0,6	0/0:22,0:21:57.13:0,57,646	0/0:16,0:16:45.09:0,45,535	0/0:37,0:37:99:0,102,1223	0/0:33,0:33:83.41:0,83,797	0/0:16,0:16:41.57:0,42,413	0/0:36,0:36:93.13:0,93,950	0/0:15,0:15:42.05:0,42,423	0/0:29,0:29:83.97:0,84,927	0/0:28,0:28:72.08:0,72,814	0/0:10,0:10:21.02:0,21,227
chr10	20508353	.	C	CTT	7488.30	PASS	AB=0.833;AC=52;AF=0.929;AN=56;BaseQRankSum=-0.954;DP=402;FS=31.908;HRun=11;HaplotypeScore=86.6087;InbreedingCoeff=0.6104;MQ=60.36;MQ0=5;MQRankSum=-2.152;QD=19.60;ReadPosRankSum=0.142;VQSLOD=1.6173;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:23:11.33:100,11,0	1/1:2,0:10:19.84:68,20,0	0/0:20,0:17:10.17:0,10,89	0/1:7,0:4:0:0,0,0	1/1:2,0:17:29.14:99,29,0	1/1:7,9:14:21.07:304,21,0	1/1:2,8:12:29.07:364,29,0	1/1:12,1:21:39.76:326,40,0	1/1:8,8:16:35.95:427,36,0	1/1:3,6:11:23.98:285,24,0	1/1:1,3:4:12:150,12,0	1/1:2,10:13:26.44:270,26,0	1/1:4,9:13:28.29:370,28,0	1/1:8,8:16:29.59:362,30,0	1/1:5,6:10:23.99:300,24,0	1/1:3,9:12:30.01:388,30,0	1/1:5,12:20:44.07:543,44,0	1/1:8,8:16:27.98:393,28,0	0/1:6,5:12:5.54:241,0,6	1/1:6,7:15:26.91:268,27,0	1/1:0,9:11:17.54:211,18,0	1/1:3,10:13:23.99:300,24,0	1/1:3,6:10:25.28:312,25,0	1/1:2,12:14:30.57:436,31,0	1/1:3,1:22:45.43:189,45,0	1/1:11,1:17:34.54:264,35,0	1/1:5,0:10:17.77:148,18,0	1/1:3,1:14:39:370,39,0
chr10	20509584	.	GATATATATATATATATATATATATATAT	G	1945.33	PASS	AC=14;AF=0.368;AN=38;BaseQRankSum=1.942;DP=199;FS=8.080;HRun=0;HaplotypeScore=138.0484;InbreedingCoeff=0.4590;MQ=61.71;MQ0=2;MQRankSum=-2.289;QD=24.62;ReadPosRankSum=2.913;VQSLOD=1.8273;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:18,1:18:3.01:173,3,0	1/1:4,3:8:12.04:667,12,0	0/0:6,0:4:0:0,0,0	0/0:13,0:3:1.25:0,1,3	1/1:18,3:21:9.03:548,9,0	./.	./.	0/0:13,0:13:8.01:0,8,80	0/0:7,0:8:3.01:0,3,31	0/0:5,0:4:0.47:0,0,1	0/0:7,0:10:9.03:0,9,239	0/0:4,0:6:9.03:0,9,169	./.	0/0:2,0:3:6.02:0,6,184	1/1:6,0:6:3.01:74,3,0	1/1:3,0:5:6.02:269,6,0	1/1:9,0:11:3.01:162,3,0	0/0:12,0:12:1.59:0,2,16	0/0:8,0:9:0.72:0,1,289	./.	./.	./.	./.	0/0:4,0:4:1.82:0,2,5	1/1:8,1:9:3.01:173,3,0	./.	./.	0/0:3,0:3:3.01:0,3,207
chr10	20509696	.	CACA	C	1188.87	PASS	AB=0.948;AC=27;AF=0.482;AN=56;BaseQRankSum=-10.594;DP=390;FS=4.999;HRun=0;HaplotypeScore=116.0696;InbreedingCoeff=-0.6836;MQ=57.56;MQ0=15;MQRankSum=-0.295;QD=3.75;ReadPosRankSum=-6.566;VQSLOD=-0.6373;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:19,1:20:71.51:72,0,84	0/1:4,0:4:18.74:19,0,23	0/0:34,0:8:24.07:0,24,320	0/0:33,0:6:5.22:0,5,68	0/1:30,0:30:99:158,0,170	0/1:12,0:12:28.77:29,0,74	1/1:5,0:4:2.22:7,2,0	0/1:18,0:16:4.10:4,0,239	0/1:11,0:11:60.69:61,0,88	0/1:13,4:17:70.84:87,0,71	0/1:11,0:11:34.69:35,0,71	0/1:10,0:10:41.06:41,0,54	0/1:7,2:9:65.37:78,0,65	0/1:8,0:8:27.22:27,0,59	0/1:10,4:14:77.77:78,0,120	0/1:7,1:8:12.99:74,0,13	0/1:17,1:18:13.38:13,0,141	0/1:27,0:26:99:101,0,213	0/1:12,2:12:46.44:46,0,54	0/1:8,1:9:27.99:90,0,28	0/1:10,0:10:18.72:83,0,19	0/1:7,1:8:37.70:63,0,38	0/0:6,0:4:0.26:0,0,21	0/1:7,0:7:7.71:8,0,48	0/1:16,1:17:69.47:69,0,129	0/1:9,0:9:20.29:20,0,91	0/1:10,0:10:22.56:31,0,23	1/1:11,0:11:14.23:48,14,0
chr10	20509698	.	CA	C	1871.44	PASS	AB=1.000;AC=42;AF=0.750;AN=56;BaseQRankSum=1.470;DP=388;FS=0.000;HRun=2;HaplotypeScore=100.2865;InbreedingCoeff=0.7069;MQ=57.95;MQ0=15;MQRankSum=2.638;QD=6.91;ReadPosRankSum=0.926;VQSLOD=0.6715;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:18,2:20:20.24:109,20,0	1/1:4,0:4:9.06:41,9,0	0/0:35,0:9:27.04:0,27,317	0/0:29,0:3:6.91:0,7,80	1/1:28,0:28:44.23:207,44,0	1/1:11,0:11:18.19:72,18,0	1/1:4,0:3:2.22:7,2,0	0/0:23,0:21:16.95:0,17,451	0/1:11,0:11:4.82:75,0,5	1/1:17,0:17:17:96,17,0	1/1:11,0:11:23.51:79,24,0	1/1:10,0:10:22.78:87,23,0	0/1:9,0:9:2.92:71,0,3	1/1:9,0:9:17.85:80,18,0	1/1:15,0:15:24.40:181,24,0	1/1:7,0:7:17.40:95,17,0	1/1:19,0:19:25.13:125,25,0	1/1:27,0:26:24.25:154,24,0	1/1:14,0:12:11.41:48,11,0	1/1:7,2:9:7.11:102,7,0	1/1:9,0:9:16.43:93,16,0	1/1:8,0:8:18.29:94,18,0	1/1:5,1:4:6.45:20,6,0	1/1:7,0:7:13.66:44,14,0	1/1:16,0:16:23.78:167,24,0	0/0:9,0:9:2.60:0,3,143	0/0:10,0:10:15.23:0,15,76	0/0:11,0:11:12.22:0,12,36
chr10	20511718	.	G	GGTGTGTGTGT	3961.30	PASS	AB=1.000;AC=31;AF=0.596;AN=52;BaseQRankSum=0.165;DP=700;FS=3.242;HRun=0;HaplotypeScore=228.7903;InbreedingCoeff=0.5288;MQ=62.59;MQ0=10;MQRankSum=-2.035;QD=8.76;ReadPosRankSum=-2.383;VQSLOD=1.7885;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:45:15.84:0,16,452	0/0:9,0:12:3.01:0,3,30	./.	./.	0/0:16,0:15:3:0,3,26	1/1:27,0:27:15.03:342,15,0	1/1:33,0:32:10.52:289,11,0	0/1:26,0:26:0.99:1,0,16	1/1:21,0:21:12.87:317,13,0	1/1:25,0:24:32.18:632,32,0	1/1:14,0:13:3:25,3,0	1/1:24,0:31:9.35:294,9,0	1/1:24,0:24:17.80:381,18,0	1/1:19,0:18:3.04:105,3,0	0/1:31,0:31:54.73:188,0,55	0/0:22,0:22:19.27:0,19,345	0/0:17,0:20:7.48:0,7,243	0/1:30,0:33:54.75:55,0,476	1/1:19,0:18:10.39:230,10,0	0/0:12,3:17:0.26:0,0,0	1/1:49,0:48:9.90:274,10,0	1/1:19,0:18:9.03:212,9,0	1/1:24,0:23:22.73:381,23,0	1/1:24,3:28:0.47:1,0,0	0/0:22,0:22:17.80:0,18,337	1/1:26,0:26:21.62:234,22,0	0/0:13,0:18:5.89:0,6,54	0/0:10,0:9:0.47:0,0,1
chr10	20512861	.	GTTC	G	911.29	PASS	AB=0.992;AC=21;AF=0.375;AN=56;BaseQRankSum=9.041;DP=527;FS=22.864;HRun=0;HaplotypeScore=106.7907;InbreedingCoeff=-0.2972;MQ=66.44;MQ0=1;MQRankSum=-2.387;QD=2.73;ReadPosRankSum=6.505;VQSLOD=-0.3234;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:69.44:0,69,480	0/0:5,0:5:5.83:0,6,22	0/0:28,0:20:49.57:0,50,454	0/0:19,0:13:11.74:0,12,268	0/1:12,0:12:0.80:1,0,114	0/1:16,0:16:33.96:34,0,49	0/1:17,0:17:6.82:7,0,144	0/1:32,0:31:44.95:45,0,337	1/1:5,1:6:12.42:69,12,0	0/1:20,0:20:3.02:3,0,262	0/1:19,0:19:73.53:74,0,100	0/0:11,1:12:8.45:0,8,82	0/1:9,1:10:32.99:85,0,33	0/1:16,0:16:19.70:85,0,20	0/0:20,0:20:8.61:0,9,144	0/0:19,0:19:29.12:0,29,234	0/0:36,0:36:81.15:0,81,420	0/1:23,1:23:39.04:39,0,158	0/1:18,0:18:44.03:94,0,44	0/1:26,0:26:99:99,0,165	0/1:23,0:23:64.70:65,0,116	0/1:9,0:9:17.88:18,0,49	0/1:18,0:18:46.75:78,0,47	0/1:15,0:15:47.78:48,0,75	0/0:22,0:22:36.48:0,36,313	0/1:30,0:30:99:148,0,160	0/1:17,0:17:59.93:60,0,83	1/1:6,0:6:5.93:23,6,0
chr10	20512864	.	CTTT	C	5074.28	PASS	AB=0.614;AC=37;AF=0.661;AN=56;BaseQRankSum=-8.722;DP=528;FS=2.084;HRun=16;HaplotypeScore=94.8602;InbreedingCoeff=0.3262;MQ=66.39;MQ0=1;MQRankSum=-1.356;QD=13.11;ReadPosRankSum=2.010;VQSLOD=2.9677;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,1:33:0.08:0,0,98	0/0:1,0:6:4.05:0,4,9	0/0:29,0:19:28.52:0,29,306	0/0:18,0:12:0.28:0,0,209	0/1:5,2:12:38.54:61,0,39	1/1:4,10:16:22.35:241,22,0	1/1:7,9:17:13.29:144,13,0	1/1:16,13:28:32.66:354,33,0	1/1:1,5:6:15.04:161,15,0	1/1:11,7:20:19.09:208,19,0	1/1:5,14:19:32.59:336,33,0	0/1:6,2:13:44.71:45,0,57	1/1:4,7:11:20.96:226,21,0	1/1:4,12:16:5.91:293,6,0	0/1:6,1:20:17.57:18,0,28	0/0:6,0:19:16.75:0,17,58	0/0:9,0:36:36.39:0,36,133	0/1:7,4:24:3.52:131,0,4	1/1:1,15:17:25.16:429,25,0	1/1:8,15:25:38.21:409,38,0	1/1:7,17:24:32.84:355,33,0	1/1:3,6:9:14.78:146,15,0	1/1:4,11:17:19.53:338,20,0	1/1:6,8:14:26.85:275,27,0	0/1:9,1:21:17.25:17,0,30	1/1:10,20:32:37.52:577,38,0	0/1:5,10:16:12.81:206,0,13	0/1:3,4:8:8.85:105,0,9
chr10	20513095	.	ACAGGAGCGTGAC	A	23877.45	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=4.004;DP=662;FS=9.194;HRun=0;HaplotypeScore=288.8223;InbreedingCoeff=0.9975;MQ=78.00;MQ0=0;MQRankSum=-18.940;QD=80.13;ReadPosRankSum=-1.428;VQSLOD=2.9358;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:57:99:0,172,8667	0/0:12,0:12:33.10:0,33,1591	0/0:21,0:21:51.18:0,51,2770	0/0:20,0:20:45.15:0,45,2405	0/0:31,0:31:90.30:0,90,4159	1/1:4,17:21:39.13:1445,39,0	1/1:5,22:27:57.20:2119,57,0	0/0:24,0:24:69.22:0,69,3524	1/1:0,19:19:57.20:2143,57,0	1/1:6,16:22:48.15:1659,48,0	1/1:6,9:15:27.09:819,27,0	1/1:4,28:32:75.26:2819,75,0	1/1:1,22:23:60.21:2255,60,0	1/1:3,21:24:54.16:1919,54,0	0/0:51,0:51:99:0,147,7330	0/0:36,0:36:99:0,105,5455	0/0:29,0:29:72.24:0,72,3640	0/0:17,0:17:45.11:0,45,2264	1/1:3,10:13:27.09:1016,27,0	1/1:0,18:18:51.18:1852,51,0	1/1:6,16:22:36.12:1282,36,0	1/1:3,17:20:48.16:1739,48,0	1/1:2,13:15:39.13:1284,39,0	1/1:5,22:27:42.14:1529,42,0	0/0:12,0:12:36.11:0,36,1713	0/0:30,0:30:87.30:0,87,5121	0/0:19,0:19:54.17:0,54,3051	0/0:5,0:5:15.05:0,15,923
chr10	20513647	.	TAC	T	620.02	PASS	AB=0.929;AC=32;AF=0.696;AN=46;BaseQRankSum=2.732;DP=480;FS=11.556;HRun=0;HaplotypeScore=62.4832;InbreedingCoeff=0.3214;MQ=68.09;MQ0=9;MQRankSum=-0.195;QD=2.27;ReadPosRankSum=3.025;VQSLOD=0.3396;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:15.03:0,15,195	0/0:6,0:6:6:0,6,67	./.	./.	0/0:19,0:19:6:0,6,62	0/1:15,2:18:13.34:67,0,13	1/1:19,3:23:5.49:46,5,0	0/0:18,0:18:1.82:0,2,5	0/0:16,0:16:3.01:0,3,44	./.	1/1:9,0:9:5.84:46,6,0	1/1:13,0:14:2.84:14,3,0	0/0:12,0:12:0:0,0,0	1/1:13,3:15:5.75:44,6,0	1/1:11,0:13:2.84:14,3,0	1/1:8,0:8:2.84:14,3,0	1/1:19,7:25:18.04:193,18,0	1/1:9,2:11:3.01:32,3,0	./.	1/1:12,0:13:5.85:46,6,0	1/1:24,6:29:6.01:64,6,0	1/1:14,4:18:3.01:32,3,0	1/1:4,0:6:2.84:14,3,0	1/1:22,0:21:3.01:32,3,0	0/1:12,0:12:11.49:11,0,38	1/1:14,0:19:8.52:42,9,0	1/1:11,0:14:8.48:41,8,0	./.
chr10	20514469	.	G	GT	2460.78	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=-8.655;DP=565;FS=0.458;HRun=8;HaplotypeScore=64.3152;InbreedingCoeff=0.9212;MQ=74.98;MQ0=0;MQRankSum=-0.645;QD=20.85;ReadPosRankSum=1.611;VQSLOD=3.6408;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,16:17:36.11:416,36,0	1/1:0,11:11:27.04:297,27,0	0/0:39,0:32:57.62:0,58,525	0/1:21,0:17:2.47:2,0,129	1/1:2,24:26:69.14:779,69,0	0/0:17,0:17:45.02:0,45,412	0/0:16,0:16:38.99:0,39,352	0/0:26,0:26:66.01:0,66,596	0/0:15,0:15:39.01:0,39,354	0/0:29,0:29:75.02:0,75,679	0/0:29,0:29:72.04:0,72,659	0/0:16,0:16:39.02:0,39,357	0/0:15,0:15:39.01:0,39,357	0/0:21,0:21:60.01:0,60,540	1/1:3,14:17:36.11:415,36,0	0/0:16,0:16:44.99:0,45,402	0/0:23,0:22:63.01:0,63,570	0/0:21,0:21:63.03:0,63,572	0/0:23,0:23:53.97:0,54,482	0/0:32,0:33:95.01:0,95,845	0/0:7,0:7:21.01:0,21,192	0/0:17,0:17:42.01:0,42,381	0/0:21,0:21:57.02:0,57,517	0/0:10,0:10:30.02:0,30,274	1/1:3,23:26:62.98:726,63,0	0/0:21,0:21:60.02:0,60,543	0/0:27,0:27:80.98:0,81,721	0/0:5,0:5:15.01:0,15,137
chr10	20514941	.	A	ATTGG	7068.54	PASS	AB=0.986;AC=30;AF=0.536;AN=56;BaseQRankSum=3.161;DP=668;FS=1.334;HRun=0;HaplotypeScore=154.2992;InbreedingCoeff=0.8139;MQ=49.98;MQ0=8;MQRankSum=-8.254;QD=27.50;ReadPosRankSum=4.553;VQSLOD=4.9672;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:62.41:0,62,853	0/0:15,0:15:32.83:0,33,424	0/0:39,0:18:32.83:0,33,475	0/0:32,0:14:10.85:0,11,150	0/0:32,0:32:62.74:0,63,890	1/1:4,3:8:15.04:306,15,0	1/1:12,6:18:15.05:348,15,0	0/0:37,0:37:48.45:0,48,972	1/1:9,10:19:24:562,24,0	1/1:3,12:15:36.12:875,36,0	1/1:4,5:9:12.04:283,12,0	1/1:8,9:17:27.09:610,27,0	1/1:4,5:9:12.04:281,12,0	1/1:4,10:14:30.10:687,30,0	0/0:44,0:44:99:0,102,1493	0/1:33,1:32:50.35:50,0,422	0/0:57,0:57:68.95:0,69,1135	0/1:26,0:26:20.32:20,0,628	1/1:5,5:9:15.01:290,15,0	1/1:4,4:8:9.01:169,9,0	1/1:19,8:27:42.14:971,42,0	1/1:9,12:21:30.10:689,30,0	1/1:6,1:7:6.02:97,6,0	1/1:5,10:15:36.12:829,36,0	0/0:21,0:21:48.54:0,49,711	0/0:46,0:46:89.42:0,89,1289	0/0:36,0:35:92.32:0,92,1287	0/0:14,0:14:33.08:0,33,476
chr10	20514953	.	GTTCA	G	5318.33	PASS	AB=0.868;AC=38;AF=0.679;AN=56;BaseQRankSum=9.295;DP=594;FS=4.923;HRun=0;HaplotypeScore=139.2516;InbreedingCoeff=0.1477;MQ=47.96;MQ0=7;MQRankSum=-8.943;QD=12.51;ReadPosRankSum=-2.972;VQSLOD=3.8825;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:25,6:30:99:262,0,677	0/1:13,4:17:99:261,0,335	0/0:31,0:16:38.02:0,38,521	0/0:32,0:11:19.88:0,20,253	0/1:26,4:30:99:351,0,693	1/1:6,0:6:14.86:146,15,0	1/1:10,0:10:15.04:175,15,0	0/1:29,12:41:99:340,0,1214	1/1:11,0:11:23.85:243,24,0	1/1:12,0:12:34.97:314,35,0	1/1:7,0:7:11.98:123,12,0	1/1:13,0:13:27.08:311,27,0	1/1:6,0:6:11.83:104,12,0	1/1:12,0:12:29.56:269,30,0	0/0:45,0:45:79.90:0,80,1430	0/1:29,0:27:26.33:26,0,444	0/0:58,1:59:45.59:0,46,1024	0/1:24,0:25:99:176,0,858	1/1:7,0:5:11.90:132,12,0	1/1:6,0:6:8.99:91,9,0	1/1:18,1:19:42.01:468,42,0	1/1:15,0:15:29.58:253,30,0	1/1:5,0:5:5.95:56,6,0	1/1:14,0:14:35.94:231,36,0	0/1:19,1:20:99:146,0,626	0/1:35,6:41:99:450,0,1014	0/1:25,10:34:99:307,0,1046	0/1:10,3:13:83.27:83,0,284
chr10	20514957	.	A	ATTGGTTGG	4357.66	PASS	AB=1.000;AC=42;AF=0.840;AN=50;BaseQRankSum=-2.581;DP=551;FS=0.913;HRun=0;HaplotypeScore=176.5573;InbreedingCoeff=0.3417;MQ=48.20;MQ0=4;MQRankSum=0.718;QD=8.58;ReadPosRankSum=2.991;VQSLOD=3.8581;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:34,0:33:31.64:391,32,0	1/1:17,0:17:8.89:165,9,0	0/1:32,0:15:1.82:2,0,3	0/0:27,0:8:1.77:0,2,45	1/1:30,0:30:32.48:326,32,0	0/1:5,0:5:0:0,0,0	./.	1/1:38,0:38:42.08:344,42,0	0/1:8,0:8:0:0,0,0	1/1:12,0:12:0.47:1,0,0	1/1:4,0:4:1.55:4,2,0	./.	1/1:4,0:4:2.74:12,3,0	0/1:10,0:10:0:0,0,0	0/1:44,0:44:99:323,0,133	1/1:14,16:31:2.99:119,3,0	1/1:23,34:60:6.01:146,6,0	1/1:25,0:25:36.58:1097,37,0	1/1:5,0:3:0.47:1,0,0	1/1:3,0:3:2.04:6,2,0	0/1:15,0:15:0:0,0,0	1/1:10,0:10:2.22:7,2,0	./.	1/1:15,0:15:12.28:82,12,0	1/1:19,0:19:21.74:220,22,0	1/1:39,0:39:29.17:641,29,0	1/1:34,0:33:37.53:375,38,0	1/1:12,0:12:2.16:95,2,0
chr10	20514993	.	GTTCA	G	2075.39	PASS	AB=0.991;AC=29;AF=0.580;AN=50;BaseQRankSum=7.170;DP=473;FS=17.952;HRun=0;HaplotypeScore=115.1498;InbreedingCoeff=0.2256;MQ=48.75;MQ0=12;MQRankSum=-5.751;QD=8.58;ReadPosRankSum=-3.761;VQSLOD=0.5458;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:48,0:48:99:106,0,2138	0/1:10,0:10:49.52:50,0,369	0/0:21,0:3:6.02:0,6,103	0/0:34,0:8:21.07:0,21,398	0/0:29,0:29:6.09:0,6,1450	1/1:0,2:2:3.01:38,3,0	./.	0/0:40,0:38:93.55:0,94,1955	1/1:0,6:6:9.03:147,9,0	1/1:0,3:3:9.01:122,9,0	./.	1/1:0,5:5:15.05:221,15,0	1/1:1,2:3:6.02:97,6,0	1/1:0,2:2:3.01:49,3,0	0/1:46,0:45:99:258,0,2052	0/0:28,0:28:46.04:0,46,1097	0/0:49,0:49:72.24:0,72,1767	0/0:30,0:30:68.41:0,68,1312	1/1:4,0:1:3.01:48,3,0	1/1:2,0:2:6.01:71,6,0	1/1:2,3:5:9.02:124,9,0	./.	1/1:1,1:1:3.01:49,3,0	1/1:4,2:6:9.50:121,10,0	0/1:16,0:16:86.28:86,0,599	0/1:40,3:43:99:460,0,1770	0/1:31,0:30:99:147,0,1238	0/1:8,0:8:50.58:51,0,327
chr10	20516687	.	CTCAT	C	6866.45	PASS	AB=0.947;AC=30;AF=0.536;AN=56;BaseQRankSum=-1.232;DP=565;FS=6.433;HRun=0;HaplotypeScore=102.2087;InbreedingCoeff=0.8186;MQ=66.22;MQ0=8;MQRankSum=1.236;QD=20.93;ReadPosRankSum=0.889;VQSLOD=4.2568;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:48:66.23:0,66,1154	0/0:2,0:3:3.01:0,3,52	0/0:13,0:12:6.49:0,6,138	0/1:18,0:14:9.67:10,0,135	0/0:9,0:30:66.22:0,66,1121	1/1:7,11:18:27.09:433,27,0	1/1:10,10:20:21.07:337,21,0	0/0:25,0:25:30.10:0,30,694	1/1:5,15:19:33.11:530,33,0	1/1:5,11:16:33.10:504,33,0	1/1:10,14:24:42.01:590,42,0	1/1:9,11:20:30.10:482,30,0	1/1:9,11:20:27.09:433,27,0	1/1:8,11:19:24.08:385,24,0	0/0:30,0:29:42.14:0,42,998	0/1:15,2:17:57.19:57,0,707	0/0:16,0:16:30.10:0,30,717	0/0:15,0:15:24.01:0,24,404	1/1:17,7:21:21.05:313,21,0	1/1:4,18:22:45.11:673,45,0	1/1:10,12:22:24.08:385,24,0	1/1:4,7:11:12.04:193,12,0	1/1:6,20:25:51.07:819,51,0	1/1:14,16:29:45.15:723,45,0	0/0:4,0:12:24.08:0,24,396	0/0:20,0:20:36.12:0,36,849	0/0:10,0:10:24.08:0,24,577	0/0:13,0:13:33.11:0,33,794
chr10	20518743	.	CGTGTGTGTGTGTGTGTGTGT	C	4970.08	PASS	AB=0.888;AC=24;AF=0.444;AN=54;BaseQRankSum=2.765;DP=549;FS=16.880;HRun=0;HaplotypeScore=267.9753;InbreedingCoeff=0.5562;MQ=67.18;MQ0=10;MQRankSum=-2.545;QD=18.48;ReadPosRankSum=1.359;VQSLOD=1.8628;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:32:42.59:0,43,1191	0/0:5,0:8:12.01:0,12,211	./.	0/0:29,0:23:9.03:0,9,170	0/0:10,0:12:15.05:0,15,551	1/1:6,9:15:14.78:603,15,0	0/1:18,0:18:43.67:60,0,44	0/0:28,0:27:23.10:0,23,574	0/1:13,6:19:78.05:499,0,78	1/1:16,1:17:13.55:351,14,0	1/1:5,5:10:8.90:331,9,0	1/1:5,5:11:12.04:529,12,0	1/1:15,5:23:25.90:1029,26,0	0/1:14,5:19:36.79:136,0,37	0/0:13,0:19:23.96:0,24,302	0/0:10,0:14:9.03:0,9,196	0/0:33,0:35:33.11:0,33,1061	0/0:18,0:22:34.47:0,34,830	1/1:29,0:29:2.16:93,2,0	1/1:5,7:13:12.04:637,12,0	0/1:42,0:41:62.78:63,0,86	1/1:11,2:13:5.85:173,6,0	1/1:10,2:14:6.90:305,7,0	1/1:17,9:24:3.48:161,3,0	0/0:12,0:17:15.05:0,15,464	0/0:21,0:21:27.04:0,27,868	0/0:6,0:10:15.05:0,15,535	0/0:2,0:4:9.03:0,9,239
chr10	20520085	.	GA	G	8717.93	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=15.434;DP=719;FS=11.193;HRun=8;HaplotypeScore=75.7872;InbreedingCoeff=0.9986;MQ=77.18;MQ0=1;MQRankSum=-1.399;QD=23.88;ReadPosRankSum=4.418;VQSLOD=4.9527;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,105,1252	0/0:10,0:10:30.08:0,30,351	0/0:28,0:26:50.57:0,51,553	0/0:25,0:19:44.33:0,44,433	0/0:24,0:24:63.16:0,63,728	1/1:0,18:18:51.08:492,51,0	1/1:2,21:23:42.04:405,42,0	0/0:33,0:34:99:0,99,1123	1/1:4,25:29:30:572,30,0	1/1:6,31:37:90.08:853,90,0	1/1:1,24:25:66.10:636,66,0	1/1:1,23:24:54.09:521,54,0	1/1:2,22:24:63.10:608,63,0	1/1:1,35:36:99:955,99,0	0/0:24,1:25:40.34:0,40,765	0/0:27,0:27:75.19:0,75,862	0/0:29,0:29:69.21:0,69,829	0/0:19,0:19:45.12:0,45,529	1/1:2,6:8:18.02:173,18,0	1/1:1,24:25:71.99:672,72,0	1/1:1,30:31:87.14:840,87,0	1/1:0,29:30:77.15:730,77,0	1/1:3,22:25:56.72:537,57,0	1/1:1,29:30:75.12:724,75,0	0/0:20,0:20:30.80:0,31,557	0/0:33,0:33:96.28:0,96,1135	0/0:33,0:32:90.27:0,90,1076	0/0:10,0:10:30.09:0,30,361
chr10	20521910	.	GA	G	6334.40	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=13.978;DP=629;FS=5.991;HRun=10;HaplotypeScore=80.7842;InbreedingCoeff=0.9602;MQ=70.26;MQ0=0;MQRankSum=-0.495;QD=20.11;ReadPosRankSum=4.247;VQSLOD=5.6616;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,36:37:99:885,102,0	1/1:0,11:11:32.99:287,33,0	0/0:21,1:22:27.48:0,27,487	0/0:14,0:12:0.04:0,0,121	1/1:2,25:27:71.97:625,72,0	0/0:13,0:13:39.11:0,39,431	0/0:22,0:22:48.13:0,48,531	1/1:4,31:35:92.94:803,93,0	0/0:23,0:23:51.14:0,51,564	0/0:22,0:22:51.14:0,51,564	0/0:15,0:15:39.09:0,39,422	0/0:21,1:22:29.20:0,29,548	0/0:24,0:24:66.15:0,66,712	0/0:19,0:19:57.15:0,57,630	1/1:4,18:22:47.99:416,48,0	1/1:1,21:22:26.51:392,27,0	1/1:5,16:21:14.80:357,15,0	1/1:5,29:35:77.01:657,77,0	0/0:20,0:21:50.96:0,51,536	0/0:19,0:20:47.96:0,48,511	0/0:18,0:18:48.13:0,48,531	0/0:25,0:25:60.14:0,60,652	0/0:17,0:17:42.11:0,42,464	0/0:17,0:17:51.14:0,51,564	1/1:4,32:36:71.98:625,72,0	1/1:4,27:31:20.70:635,21,0	1/1:4,25:29:50.90:443,51,0	1/1:0,9:9:24:208,24,0
chr10	20524473	.	GAGCCCA	G	6228.06	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=13.420;DP=781;FS=3.605;HRun=0;HaplotypeScore=164.6975;InbreedingCoeff=0.9950;MQ=85.04;MQ0=0;MQRankSum=-12.194;QD=62.28;ReadPosRankSum=-0.361;VQSLOD=5.1746;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,157,5455	0/0:8,0:8:24.08:0,24,861	0/0:29,0:29:81.23:0,81,2614	0/0:23,0:23:66.23:0,66,2125	0/0:26,0:26:78.26:0,78,2677	0/0:20,0:20:60.21:0,60,2148	0/0:34,0:34:96.30:0,96,3210	1/1:0,25:25:72.22:1543,72,0	0/0:28,0:28:84.27:0,84,2874	0/0:28,0:28:78.27:0,78,2803	0/0:14,0:14:42.14:0,42,1414	0/0:23,0:23:69.24:0,69,2432	0/0:32,0:32:93.32:0,93,3159	0/0:33,0:33:99:0,99,3404	0/0:34,0:34:99:0,102,3485	0/0:31,0:31:93.32:0,93,3332	0/0:46,0:46:99:0,138,4879	0/0:18,0:18:51.18:0,51,1832	0/0:23,0:23:63.22:0,63,2210	0/0:22,0:22:63.22:0,63,2239	0/0:39,0:39:99:0,117,3945	0/0:37,0:37:99:0,111,3819	0/0:24,0:24:66.21:0,66,2201	0/0:26,0:26:78.27:0,78,2774	0/0:30,0:30:90.29:0,90,3097	1/1:0,32:32:96.29:2162,96,0	1/1:2,32:34:90.31:2162,90,0	1/1:0,9:9:15.05:361,15,0
chr10	20527430	.	AGAGAGAGAGAGAGAGAGT	A	3068.93	PASS	AB=1.000;AC=28;AF=0.500;AN=56;BaseQRankSum=5.132;DP=525;FS=22.193;HRun=0;HaplotypeScore=189.2213;InbreedingCoeff=-0.2538;MQ=50.85;MQ0=43;MQRankSum=6.072;QD=7.43;ReadPosRankSum=0.920;VQSLOD=1.4705;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:32,0:31:21.85:283,0,22	0/1:4,0:4:10.56:41,0,11	0/0:17,0:9:13.13:0,13,148	0/0:26,0:4:5.66:0,6,46	0/0:12,0:11:2.96:0,3,19	0/1:18,0:17:99:173,0,111	0/1:20,0:18:94.87:241,0,95	1/1:26,0:25:22.20:394,22,0	0/1:23,0:21:99:328,0,123	0/1:27,0:23:99:125,0,328	1/1:6,0:6:1.25:3,1,0	0/1:20,0:20:99:140,0,119	0/1:18,0:17:56.89:117,0,57	0/1:13,0:10:70.45:118,0,70	1/1:1,17:18:3.01:110,3,0	0/0:17,0:17:15.90:0,16,286	0/1:25,0:22:9.34:9,0,244	0/1:15,0:13:99:110,0,160	1/1:12,0:10:26.76:209,27,0	0/1:15,0:15:28.85:29,0,57	0/1:31,0:25:7.74:18,0,8	0/0:26,0:26:3.09:0,3,147	0/0:14,0:14:5.04:0,5,94	1/1:19,0:15:14.63:149,15,0	1/1:14,0:14:26.65:223,27,0	0/1:19,0:17:99:157,0,265	0/1:17,0:15:80.93:178,0,81	0/1:21,0:12:81.30:81,0,124
chr10	20527444	.	AGAGT	A	5432.37	PASS	AC=44;AF=0.846;AN=52;BaseQRankSum=1.475;DP=533;FS=0.856;HRun=0;HaplotypeScore=109.0095;InbreedingCoeff=0.6708;MQ=64.49;MQ0=23;MQRankSum=-0.012;QD=12.84;ReadPosRankSum=5.175;VQSLOD=3.8584;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:34,0:33:77.74:617,78,0	1/1:5,0:5:11.93:92,12,0	0/0:26,0:16:28.08:0,28,295	0/0:35,0:13:23.09:0,23,198	./.	1/1:16,0:15:35.38:283,35,0	1/1:19,0:18:47.65:385,48,0	1/1:30,0:29:64.16:526,64,0	1/1:24,0:23:59.22:456,59,0	1/1:26,0:23:38.64:298,39,0	./.	1/1:17,0:17:41.80:329,42,0	1/1:17,0:17:29.05:213,29,0	1/1:11,0:10:23.84:186,24,0	0/0:18,0:18:0.47:0,0,1	1/1:3,13:16:3.01:58,3,0	1/1:22,0:21:2.28:24,2,0	1/1:18,0:18:44.79:342,45,0	1/1:15,0:13:35.69:282,36,0	1/1:16,0:16:8.88:58,9,0	1/1:25,0:23:2.81:24,3,0	1/1:27,0:27:0.21:1,0,0	0/0:11,0:11:0.20:0,0,1	1/1:20,0:17:26.57:207,27,0	1/1:12,0:12:32.86:264,33,0	1/1:21,0:19:43.85:373,44,0	1/1:16,0:16:35.65:273,36,0	1/1:16,0:11:11.18:145,11,0
chr10	20527446	.	AGT	A	5655.64	PASS	AB=0.539;AC=44;AF=0.815;AN=54;BaseQRankSum=-0.218;DP=539;FS=1.811;HRun=0;HaplotypeScore=99.2917;InbreedingCoeff=0.6620;MQ=66.59;MQ0=16;MQRankSum=-1.847;QD=13.50;ReadPosRankSum=4.209;VQSLOD=4.5787;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:34,0:33:77.74:617,78,0	1/1:5,0:5:11.93:92,12,0	0/0:26,0:16:28.08:0,28,295	0/0:37,0:15:26.09:0,26,219	./.	1/1:18,0:17:41.85:333,42,0	1/1:21,0:20:53.84:432,54,0	1/1:8,23:30:68.68:554,69,0	1/1:25,0:24:62.37:480,62,0	1/1:11,14:23:40.89:302,41,0	0/1:0,9:9:0:0,0,0	1/1:17,0:17:41.73:329,42,0	1/1:17,0:17:29.15:214,29,0	1/1:10,0:10:23.45:185,23,0	0/0:18,0:18:0.47:0,0,1	1/1:16,0:16:3:27,3,0	1/1:3,19:21:2.84:24,3,0	1/1:18,0:18:44.79:342,45,0	1/1:3,13:14:38.73:307,39,0	1/1:0,16:16:8.88:58,9,0	1/1:4,20:23:2.67:24,3,0	0/0:8,19:27:0.47:0,0,1	0/1:3,8:11:0:0,0,0	1/1:18,0:17:26.87:207,27,0	1/1:13,0:13:35.86:289,36,0	1/1:4,18:20:47.90:398,48,0	1/1:17,0:17:38.68:297,39,0	1/1:14,0:11:11.45:145,11,0
chr10	20528413	.	TCC	T	4192.92	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-2.999;DP=481;FS=0.407;HRun=10;HaplotypeScore=103.7822;InbreedingCoeff=0.8844;MQ=73.71;MQ0=1;MQRankSum=1.229;QD=23.96;ReadPosRankSum=7.473;VQSLOD=2.7739;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,31:35:78.17:851,78,0	1/1:0,5:5:12.03:134,12,0	0/0:18,0:16:33.64:0,34,414	0/0:16,0:15:0.83:0,1,217	1/1:1,12:13:30.06:325,30,0	0/0:8,0:10:20.55:0,21,272	0/0:23,0:26:62.03:0,62,799	0/0:10,0:16:16.56:0,17,97	0/0:17,0:18:36.47:0,36,485	0/0:9,0:9:15:0,15,209	0/0:5,0:5:14.96:0,15,193	0/0:29,0:29:74.73:0,75,865	0/0:13,0:13:30.09:0,30,321	0/0:22,0:22:54.93:0,55,681	1/1:2,20:21:57.15:635,57,0	1/1:2,16:18:23.69:477,24,0	1/1:6,31:37:72.18:802,72,0	1/1:5,21:26:57.13:635,57,0	0/0:12,0:12:21.07:0,21,331	0/0:9,0:11:25.77:0,26,259	0/0:33,0:33:45.59:0,46,621	0/0:9,0:10:8.39:0,8,104	0/0:2,0:2:0.47:0,0,1	0/0:18,0:20:47.56:0,48,643	1/1:3,15:19:30.04:334,30,0	0/0:5,0:16:30.75:0,31,126	0/0:2,0:13:22.46:0,22,77	0/0:3,0:7:2.50:0,2,9
chr10	20529867	.	CAACA	C	12011.96	PASS	AB=0.581;AC=27;AF=0.482;AN=56;BaseQRankSum=15.803;DP=741;FS=0.306;HRun=0;HaplotypeScore=128.9815;InbreedingCoeff=0.9512;MQ=76.24;MQ0=3;MQRankSum=-1.977;QD=33.65;ReadPosRankSum=3.618;VQSLOD=4.6021;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,99,2436	0/0:12,0:12:30.10:0,30,712	0/0:41,0:37:29.83:0,30,1091	0/0:32,0:29:63.02:0,63,1295	0/0:40,1:41:48.16:0,48,2262	1/1:3,25:28:69.24:1176,69,0	1/1:5,26:32:16.58:830,17,0	0/0:26,0:26:63.22:0,63,1468	1/1:2,21:23:48:816,48,0	1/1:8,17:25:51.17:831,51,0	1/1:3,21:24:54.18:904,54,0	1/1:6,23:29:51.17:866,51,0	1/1:3,23:26:56.86:956,57,0	1/1:3,22:25:63.22:1072,63,0	0/0:32,0:32:90.29:0,90,2132	0/0:27,0:27:75.26:0,75,1875	0/0:37,0:36:99:0,102,2437	0/0:23,0:23:63.21:0,63,1493	0/1:5,13:18:2.86:535,0,3	1/1:1,20:20:57.11:877,57,0	1/1:6,15:21:37.37:662,37,0	1/1:7,13:20:33.11:563,33,0	1/1:2,20:22:39.13:647,39,0	1/1:3,40:43:75.26:1276,75,0	0/0:21,0:21:54.18:0,54,1298	0/0:26,0:26:54.18:0,54,1293	0/0:19,0:19:45.15:0,45,1111	0/0:12,0:12:36.12:0,36,903
chr10	20530478	.	TCCCC	T	1019.40	PASS	AB=0.688;AC=9;AF=0.161;AN=56;BaseQRankSum=0.581;DP=296;FS=16.707;HRun=12;HaplotypeScore=54.4615;InbreedingCoeff=0.6479;MQ=77.59;MQ0=3;MQRankSum=-1.298;QD=13.78;ReadPosRankSum=5.702;VQSLOD=-0.7657;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,23:29:22.06:481,22,0	1/1:3,4:7:5.99:91,6,0	0/0:34,0:17:18.31:0,18,418	0/0:12,0:11:25.23:0,25,328	0/1:6,5:11:0.06:0,0,0	0/0:8,0:8:18.04:0,18,320	0/0:16,0:18:24.19:0,24,294	0/0:6,0:6:2.99:0,3,73	0/0:5,0:5:8.52:0,9,207	0/0:4,0:4:9.02:0,9,131	0/0:5,0:5:3:0,3,26	0/0:18,0:18:38.76:0,39,754	0/0:5,0:6:12.45:0,12,195	0/0:9,0:9:17.09:0,17,299	1/1:4,14:18:30.05:454,30,0	0/0:16,0:18:30.96:0,31,427	0/0:5,0:13:21.62:0,22,205	0/0:3,0:5:11.76:0,12,72	0/0:2,0:2:0:0,0,0	0/0:8,0:8:12.04:0,12,195	0/0:8,0:8:5.57:0,6,118	0/0:6,0:6:5.98:0,6,80	0/0:4,0:4:7.27:0,7,105	0/0:7,0:7:9.86:0,10,112	1/1:0,9:9:9.50:137,10,0	0/0:6,0:6:3.01:0,3,63	0/0:10,0:10:24.05:0,24,461	0/0:9,0:9:6.02:0,6,104
chr10	20531858	.	A	AGTGTAAAT	33346.93	PASS	AB=0.615;AC=51;AF=0.911;AN=56;BaseQRankSum=-2.868;DP=353;FS=7.582;HRun=0;HaplotypeScore=99.8026;InbreedingCoeff=0.7414;MQ=80.87;MQ0=0;MQRankSum=-8.777;QD=104.21;ReadPosRankSum=3.841;VQSLOD=6.0612;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,0:13:33.11:1265,33,0	1/1:1,0:3:9.03:346,9,0	0/0:17,0:17:40.36:0,40,1150	0/0:16,0:16:36.63:0,37,1062	1/1:2,0:6:15.05:561,15,0	1/1:8,11:19:51.17:2116,51,0	1/1:5,5:14:27.09:1163,27,0	1/1:16,18:38:99:3879,102,0	1/1:3,12:15:45.15:1815,45,0	1/1:4,8:12:33.11:1395,33,0	1/1:5,1:6:15.05:461,15,0	1/1:4,7:11:33.11:1296,33,0	1/1:3,12:15:36.12:1581,36,0	1/1:3,9:12:33.11:1272,33,0	1/1:2,8:10:27.09:1106,27,0	1/1:3,8:11:30.10:1332,30,0	1/1:2,5:9:15.05:666,15,0	1/1:3,6:9:27.09:1125,27,0	1/1:6,6:14:39.13:1351,39,0	1/1:6,7:14:36.12:1322,36,0	1/1:3,5:9:15.05:445,15,0	1/1:2,6:8:24.08:875,24,0	1/1:1,7:8:24.08:972,24,0	0/1:3,5:8:14.67:634,0,15	1/1:2,0:7:21:696,21,0	1/1:2,12:14:42.14:1678,42,0	1/1:10,9:18:54.18:2255,54,0	1/1:4,12:16:48.15:1741,48,0
chr10	20531917	.	CGGCGTTAA	C	18681.97	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=1.536;DP=404;FS=20.048;HRun=0;HaplotypeScore=149.3602;InbreedingCoeff=0.8229;MQ=83.17;MQ0=0;MQRankSum=-8.609;QD=51.61;ReadPosRankSum=6.272;VQSLOD=3.1196;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,8:14:24.08:638,24,0	1/1:1,5:6:12.04:319,12,0	0/0:25,0:25:57.19:0,57,2020	0/0:17,0:17:7.95:0,8,1026	1/1:4,8:13:24.08:636,24,0	1/1:2,13:15:39.13:1035,39,0	1/1:9,5:14:18.06:478,18,0	1/1:12,27:39:77.77:1406,78,0	1/1:8,8:16:27.09:717,27,0	1/1:3,18:21:48.14:1104,48,0	1/1:2,9:11:27.09:718,27,0	1/1:2,11:13:33.11:877,33,0	1/1:5,11:16:33.11:876,33,0	1/1:5,9:15:30.10:796,30,0	1/1:3,9:12:27.09:717,27,0	1/1:6,8:14:24.08:637,24,0	1/1:1,5:6:15.05:399,15,0	1/1:3,3:6:9.03:239,9,0	1/1:12,8:20:24.08:637,24,0	1/1:4,10:14:27.09:717,27,0	1/1:4,2:6:6.02:159,6,0	1/1:1,11:12:30.10:797,30,0	1/1:2,5:7:15.05:398,15,0	1/1:2,5:7:9.03:239,9,0	1/1:2,13:15:27.09:717,27,0	1/1:0,9:9:27.09:716,27,0	1/1:4,22:26:60.21:1593,60,0	1/1:1,14:15:42.14:1115,42,0
chr10	20532685	.	A	AT	5001.35	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-6.801;DP=661;FS=1.965;HRun=9;HaplotypeScore=91.0725;InbreedingCoeff=0.9993;MQ=83.60;MQ0=0;MQRankSum=-2.741;QD=27.48;ReadPosRankSum=-1.511;VQSLOD=3.8599;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:37:95.01:0,95,813	0/0:14,0:14:35.99:0,36,312	0/0:23,0:21:38.92:0,39,329	0/0:26,0:24:33.11:0,33,368	0/0:30,0:31:86.01:0,86,735	0/0:19,0:19:35.97:0,36,313	0/0:18,0:18:47.99:0,48,417	1/1:7,36:44:99:1168,108,0	0/0:17,0:17:47.98:0,48,417	0/0:27,0:27:65.96:0,66,570	0/0:22,0:22:65.99:0,66,573	0/0:14,0:14:41.99:0,42,365	0/0:14,0:14:41.99:0,42,365	0/0:22,0:22:59.56:0,60,501	0/0:18,0:18:47.98:0,48,416	1/1:2,15:17:22.07:472,22,0	1/1:3,25:28:69.19:763,69,0	1/1:3,15:18:45.12:498,45,0	0/0:28,0:28:77.97:0,78,675	0/0:39,0:39:99:0,104,880	0/0:15,0:15:41.99:0,42,365	0/0:23,0:23:62.98:0,63,547	0/0:26,0:26:68.98:0,69,599	0/0:24,0:24:71.96:0,72,620	0/0:22,0:22:56.96:0,57,490	1/1:6,32:38:76.20:1057,76,0	1/1:1,14:15:36.10:398,36,0	1/1:0,21:22:60:645,60,0
chr10	20533431	.	TTC	T	13943.33	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-2.213;DP=794;FS=9.786;HRun=0;HaplotypeScore=130.0984;InbreedingCoeff=0.9999;MQ=68.73;MQ0=1;MQRankSum=-4.024;QD=27.72;ReadPosRankSum=1.099;VQSLOD=6.2580;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:81.28:0,81,1354	0/0:17,0:17:51.17:0,51,859	0/0:35,0:29:53.82:0,54,827	0/0:31,0:30:71.62:0,72,1099	0/0:30,0:30:77.45:0,77,1214	1/1:4,26:30:60.19:772,60,0	1/1:6,22:28:44.81:579,45,0	1/1:13,25:38:81.26:1040,81,0	1/1:4,20:24:45.15:579,45,0	1/1:3,35:38:99:1303,105,0	1/1:2,24:26:60.07:716,60,0	1/1:0,25:25:57.19:733,57,0	1/1:3,17:20:42.14:541,42,0	1/1:4,25:29:60.19:772,60,0	0/0:28,0:28:75.26:0,75,1250	0/0:25,1:26:36.60:0,37,1145	0/0:35,0:34:87.71:0,88,1544	0/0:25,0:25:66.18:0,66,1066	1/1:10,25:34:75.23:944,75,0	1/1:3,28:31:72.11:871,72,0	1/1:5,20:25:42.14:540,42,0	1/1:5,26:31:53.72:644,54,0	1/1:3,25:28:63.19:811,63,0	1/1:1,23:24:57.19:733,57,0	0/0:32,0:32:84.29:0,84,1412	1/1:13,23:36:96.28:1195,96,0	1/1:3,18:21:57.17:713,57,0	1/1:2,12:14:36.11:458,36,0
chr10	20533446	.	ATG	A	2718.95	PASS	AB=0.593;AC=7;AF=0.125;AN=56;BaseQRankSum=10.145;DP=898;FS=2.001;HRun=0;HaplotypeScore=194.5486;InbreedingCoeff=0.8388;MQ=61.44;MQ0=9;MQRankSum=-9.470;QD=24.72;ReadPosRankSum=-1.054;VQSLOD=3.6618;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:87.30:0,87,1440	0/0:20,0:20:60.20:0,60,974	0/0:54,0:30:35.48:0,35,808	0/0:43,0:31:61.37:0,61,856	0/0:22,0:22:63.22:0,63,1052	0/0:29,1:30:40.36:0,40,1197	0/0:33,0:33:66.23:0,66,1086	1/1:14,23:36:69.13:817,69,0	0/0:27,0:27:61.39:0,61,973	0/0:47,0:47:99:0,114,1885	0/0:29,0:29:75.25:0,75,1190	0/0:29,0:29:69.23:0,69,1089	0/0:23,0:23:53.69:0,54,845	0/0:37,0:37:87.12:0,87,1340	0/0:32,0:32:78.27:0,78,1293	0/0:32,0:32:90.31:0,90,1502	0/0:38,1:38:64.41:0,64,1582	0/0:30,0:30:68.52:0,69,1010	0/0:43,0:42:90.14:0,90,1656	0/0:34,0:34:90.29:0,90,1452	0/0:29,1:30:63.22:0,63,1043	0/0:27,0:27:60.20:0,60,965	0/0:26,0:26:66.22:0,66,1060	0/0:31,0:31:81.26:0,81,1302	0/0:32,0:32:87.28:0,87,1430	0/1:11,24:35:19.21:835,0,19	1/1:1,22:23:63.20:796,63,0	1/1:3,12:15:33.11:419,33,0
chr10	20533887	.	A	AG	14159.82	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-18.908;DP=678;FS=5.752;HRun=0;HaplotypeScore=58.0226;InbreedingCoeff=0.9999;MQ=85.10;MQ0=0;MQRankSum=-1.339;QD=44.39;ReadPosRankSum=3.460;VQSLOD=5.2121;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,36:36:99:1583,99,0	1/1:0,16:16:48.16:767,48,0	0/0:30,0:30:83.27:0,83,1104	0/0:14,0:14:33.07:0,33,412	1/1:0,27:27:81.28:1295,81,0	0/0:26,0:26:78.26:0,78,1090	0/0:11,0:11:33.11:0,33,462	1/1:3,29:32:87.28:1369,87,0	0/0:33,0:33:99:0,99,1369	0/0:24,0:24:69.23:0,69,965	0/0:23,0:23:69.22:0,69,948	0/0:23,0:23:69.22:0,69,949	0/0:23,0:23:66.22:0,66,923	0/0:24,0:24:72.22:0,72,988	1/1:0,27:27:75.26:1199,75,0	1/1:1,37:38:63.39:1589,63,0	1/1:1,18:19:48.16:767,48,0	1/1:1,21:22:63.21:1005,63,0	0/0:24,0:24:72.24:0,72,1006	0/0:33,0:33:96.28:0,96,1290	0/0:19,0:19:57.18:0,57,781	0/0:18,0:18:54.17:0,54,737	0/0:19,0:19:57.19:0,57,796	0/0:15,0:15:45.15:0,45,629	1/1:1,26:27:75.26:1199,75,0	1/1:1,32:33:57.34:1469,57,0	1/1:0,30:30:87.30:1391,87,0	1/1:0,12:12:33.11:527,33,0
chr10	20535203	.	CATAGATAG	C	2732.15	PASS	AB=1.000;AC=23;AF=0.460;AN=50;BaseQRankSum=2.743;DP=756;FS=1.527;HRun=0;HaplotypeScore=234.9469;InbreedingCoeff=0.6453;MQ=64.59;MQ0=4;MQRankSum=-0.240;QD=8.79;ReadPosRankSum=0.211;VQSLOD=2.5509;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:33:10.60:0,11,110	0/0:10,0:10:6.46:0,6,66	0/0:29,0:22:1.26:0,1,24	0/0:15,0:13:3.01:0,3,46	0/0:35,0:34:3:0,3,46	1/1:25,0:25:9.03:224,9,0	1/1:23,0:22:12.04:234,12,0	0/0:39,0:38:39.13:0,39,735	1/1:28,0:28:17.85:389,18,0	1/1:39,0:38:56.82:1220,57,0	1/1:6,17:23:3.01:35,3,0	1/1:18,18:36:3.01:75,3,0	1/1:30,0:30:2.87:136,3,0	1/1:26,0:26:3.48:75,3,0	0/0:35,0:35:8.54:0,9,148	0/0:26,0:26:18:0,18,224	0/0:16,0:16:8.15:0,8,97	0/0:22,0:22:15.02:0,15,225	1/1:14,6:19:15.03:318,15,0	1/1:34,0:34:3.01:74,3,0	1/1:14,0:14:9.03:124,9,0	./.	./.	./.	0/0:43,0:42:8.97:0,9,92	0/0:35,0:32:32.96:0,33,609	0/0:32,0:32:12.87:0,13,137	0/1:13,0:13:1.53:2,0,138
chr10	20535237	.	TAGATAGATGATA	T	5478.09	PASS	AB=1.000;AC=28;AF=0.519;AN=54;BaseQRankSum=2.474;DP=686;FS=3.300;HRun=0;HaplotypeScore=251.9059;InbreedingCoeff=0.2155;MQ=48.05;MQ0=6;MQRankSum=3.283;QD=12.28;ReadPosRankSum=-1.130;VQSLOD=3.5415;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:38:7.61:0,8,105	0/0:8,0:8:6.31:0,6,65	0/1:6,0:2:3.47:3,0,21	0/0:5,0:3:3.01:0,3,46	0/0:31,0:30:3:0,3,46	1/1:1,23:24:9.03:318,9,0	1/1:4,0:14:18.06:327,18,0	0/0:47,0:45:57.12:0,57,1086	1/1:9,0:22:23.87:477,24,0	1/1:4,41:44:90.18:1856,90,0	1/1:20,0:20:9.03:128,9,0	0/1:22,0:22:4.75:5,0,248	1/1:3,27:30:2.87:229,3,0	1/1:0,19:19:3.48:111,3,0	0/1:39,0:39:99:366,0,256	0/1:27,0:27:99:408,0,420	0/0:13,0:13:7.87:0,8,96	0/0:10,0:10:15.02:0,15,221	0/1:15,0:15:99:138,0,239	1/1:2,28:30:3.90:114,4,0	1/1:16,0:18:18.06:264,18,0	1/1:0,27:27:2.66:6,3,0	0/0:2,29:31:0:0,0,1	./.	0/0:37,0:36:8.81:0,9,91	0/1:36,0:33:99:530,0,697	0/1:36,0:35:99:167,0,165	0/1:15,0:15:29.66:30,0,228
chr10	20535245	.	T	TA	4481.22	PASS	AB=0.893;AC=40;AF=0.769;AN=52;BaseQRankSum=4.533;DP=671;FS=13.533;HRun=1;HaplotypeScore=211.5714;InbreedingCoeff=0.1891;MQ=46.05;MQ0=7;MQRankSum=4.356;QD=7.29;ReadPosRankSum=1.577;VQSLOD=0.4244;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,29:35:6.42:230,6,0	1/1:1,8:9:5.56:72,6,0	./.	./.	1/1:5,29:33:17.94:231,18,0	1/1:24,0:24:9.02:97,9,0	1/1:3,8:12:9:97,9,0	0/1:40,3:42:99:199,0,1138	1/1:2,10:21:15.67:181,16,0	0/1:45,0:44:99:367,0,137	1/1:18,0:20:2.29:5,2,0	0/0:26,0:26:10.31:0,10,278	0/0:29,0:29:4.74:0,5,17	1/1:19,0:19:2.58:31,3,0	1/1:14,21:40:9.54:388,10,0	1/1:12,8:27:37.75:307,38,0	1/1:3,10:13:11.10:182,11,0	0/1:2,5:7:18.30:173,0,18	0/1:18,0:18:18.47:18,0,460	1/1:30,0:30:2.71:31,3,0	1/1:2,0:14:5.45:14,5,0	0/1:27,0:27:0.19:0,0,0	0/1:31,0:30:0.07:1,0,0	0/1:16,1:17:0.12:0,0,0	1/1:2,36:37:14.90:197,15,0	0/1:3,16:31:5.45:691,0,5	1/1:2,19:37:51.72:625,52,0	1/1:1,15:16:16.74:342,17,0
chr10	20535260	.	TA	T	475.56	PASS	AB=0.847;AC=4;AF=0.074;AN=54;BaseQRankSum=2.666;DP=652;FS=7.127;HRun=1;HaplotypeScore=198.5264;InbreedingCoeff=-0.0186;MQ=45.98;MQ0=7;MQRankSum=-5.768;QD=4.17;ReadPosRankSum=-1.959;VQSLOD=-0.7229;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:31,0:30:26.85:27,0,46	0/0:9,1:10:3.48:0,3,31	./.	0/0:4,0:1:3.01:0,3,44	0/0:29,0:28:7.75:0,8,46	0/0:24,0:24:17.65:0,18,188	0/0:14,0:12:20.53:0,21,253	0/0:39,0:39:99:0,117,1687	0/0:23,1:24:26.56:0,27,341	0/0:44,0:43:72.72:0,73,745	0/0:20,0:20:17.54:0,18,227	0/0:30,0:30:48.10:0,48,739	0/0:26,0:26:14.24:0,14,149	0/0:17,0:17:8.61:0,9,102	0/0:34,0:34:25.45:0,25,154	0/0:27,0:27:18.78:0,19,298	0/0:12,0:12:9.09:0,9,67	0/0:10,0:10:15.11:0,15,130	0/0:17,0:17:45.14:0,45,674	0/0:27,0:27:11.70:0,12,147	0/0:14,0:14:3.74:0,4,10	0/0:24,0:24:5.25:0,5,88	0/0:36,0:35:14.14:0,14,218	0/0:13,0:13:0:0,0,0	0/0:40,0:39:17.84:0,18,202	0/1:24,10:32:99:300,0,272	0/1:20,12:31:72.42:221,0,72	0/1:14,2:16:33.58:34,0,214
chr10	20536314	.	T	TA	15043.62	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-8.006;DP=612;FS=27.278;HRun=9;HaplotypeScore=62.8440;InbreedingCoeff=0.9914;MQ=82.33;MQ0=0;MQRankSum=-6.555;QD=26.39;ReadPosRankSum=5.025;VQSLOD=3.4438;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,21:23:60.16:664,60,0	1/1:3,8:11:27.06:291,27,0	0/0:23,0:21:38.97:0,39,339	0/0:19,0:18:21.87:0,22,287	1/1:5,28:33:70.39:852,70,0	1/1:1,22:23:60.16:664,60,0	1/1:5,24:29:69.19:763,69,0	1/1:7,18:25:30.88:553,31,0	1/1:1,18:19:45.03:498,45,0	1/1:3,26:29:78.18:845,78,0	1/1:2,9:11:27.07:299,27,0	1/1:2,13:15:36.10:398,36,0	1/1:4,19:23:60.15:657,60,0	1/1:3,10:13:27.07:299,27,0	1/1:2,24:26:63.04:697,63,0	1/1:3,22:25:57.15:631,57,0	1/1:4,18:22:51.14:564,51,0	1/1:2,26:28:75.20:830,75,0	1/1:1,13:15:41.98:446,42,0	1/1:2,23:25:60.08:637,60,0	1/1:6,9:15:27.07:299,27,0	1/1:0,20:20:60.16:664,60,0	1/1:7,21:28:18.94:439,19,0	1/1:1,18:20:50.97:545,51,0	1/1:5,15:20:49.02:533,49,0	1/1:5,32:37:73.19:1024,73,0	1/1:3,24:27:63.16:688,63,0	1/1:1,7:8:24.06:265,24,0
chr10	20537819	.	ACT	A	1476.17	PASS	AB=0.921;AC=25;AF=0.463;AN=54;BaseQRankSum=2.178;DP=705;FS=0.553;HRun=0;HaplotypeScore=137.0447;InbreedingCoeff=-0.2464;MQ=69.22;MQ0=14;MQRankSum=-1.408;QD=2.93;ReadPosRankSum=-0.575;VQSLOD=2.6817;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:14,12:25:16.24:228,16,0	0/1:4,7:12:8.31:192,0,8	0/0:24,0:13:2.97:0,3,20	0/0:59,0:31:4.63:0,5,17	1/1:10,9:19:15.04:168,15,0	0/1:15,0:15:1.34:1,0,48	0/0:20,0:27:29.86:0,30,287	1/1:28,0:28:11.32:126,11,0	0/1:31,0:31:23.22:23,0,126	0/1:22,2:29:35.51:36,0,189	./.	0/1:20,0:19:5.94:6,0,81	0/1:26,2:28:62.40:62,0,140	0/1:29,0:29:0.45:0,0,101	0/0:20,0:33:35.93:0,36,371	0/1:26,1:28:51.69:52,0,65	0/1:30,0:30:23.61:24,0,103	0/0:18,0:18:10.51:0,11,104	0/1:20,0:18:39.16:39,0,148	0/1:21,1:22:43.18:43,0,76	0/1:17,1:19:42.24:42,0,171	0/1:23,1:24:24.63:25,0,82	0/0:22,1:23:9:0,9,95	0/1:31,1:39:48.90:49,0,309	1/1:11,5:17:8.86:81,9,0	0/1:18,4:23:97.78:200,0,98	0/1:13,11:24:13.34:183,0,13	0/1:16,1:15:15.23:58,0,15
chr10	20537841	.	TCTCTCTCTCTCTCG	T	3145.36	PASS	AB=0.975;AC=19;AF=0.339;AN=56;BaseQRankSum=2.371;DP=723;FS=4.861;HRun=0;HaplotypeScore=240.4138;InbreedingCoeff=-0.4336;MQ=53.45;MQ0=35;MQRankSum=0.775;QD=6.78;ReadPosRankSum=4.364;VQSLOD=1.5954;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:26:84.75:85,0,280	0/1:13,0:13:13.31:13,0,503	0/0:14,0:3:2.98:0,3,22	0/0:30,0:8:4.64:0,5,21	0/1:17,0:14:4.76:5,0,177	0/1:22,0:22:87.59:88,0,120	0/1:21,0:21:99:146,0,190	0/0:31,0:29:27.26:0,27,195	0/1:29,0:28:99:420,0,135	0/1:31,0:30:99:156,0,153	0/0:16,0:15:3:0,3,25	0/1:24,0:23:85.14:85,0,159	0/1:26,0:26:99:194,0,218	0/1:29,0:29:94.95:95,0,105	0/0:42,0:41:61.67:0,62,1693	0/1:9,23:31:41.62:198,0,42	1/1:30,0:29:0.08:858,0,0	0/1:16,0:16:28.01:340,0,28	0/1:25,0:20:83.26:83,0,218	0/1:30,0:27:83.31:83,0,163	0/1:27,0:21:99:122,0,195	0/1:23,0:21:6.59:7,0,80	0/0:18,0:16:12:0,12,120	0/1:41,0:39:99:321,0,270	0/0:20,0:19:16.95:0,17,262	0/0:29,0:28:51.18:0,51,1692	0/0:32,0:30:53.05:0,53,823	0/0:26,0:19:23.60:0,24,391
chr10	20537847	.	T	TCG	2269.23	PASS	AB=0.910;AC=17;AF=0.304;AN=56;BaseQRankSum=0.695;DP=694;FS=1.331;HRun=0;HaplotypeScore=144.0547;InbreedingCoeff=-0.0428;MQ=52.00;MQ0=31;MQRankSum=5.434;QD=6.12;ReadPosRankSum=4.759;VQSLOD=3.3541;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:28:29.49:306,29,0	1/1:12,0:12:7.52:73,8,0	0/0:8,0:1:2.98:0,3,22	0/0:16,0:3:4.46:0,4,20	0/1:16,0:13:6.65:61,0,7	0/0:23,0:23:17.94:0,18,162	0/1:18,0:18:97:97,0,240	0/0:30,0:28:54.86:0,55,266	0/0:26,0:25:2.54:0,3,222	0/1:27,0:26:36.36:36,0,327	0/0:15,0:14:3:0,3,25	0/0:21,0:21:20.66:0,21,202	0/0:28,0:28:19.83:0,20,281	0/0:28,0:28:11.22:0,11,130	0/1:40,1:40:99:355,0,195	0/1:29,0:28:49.41:54,0,49	0/1:13,17:29:99:556,0,150	0/1:11,6:17:91.83:323,0,92	0/0:25,0:20:24.75:0,25,355	0/0:30,0:27:24.77:0,25,213	0/0:31,0:25:9.91:0,10,380	0/0:21,0:19:12:0,12,144	0/0:18,0:16:12:0,12,121	0/1:42,0:40:41.90:42,0,405	1/1:18,0:17:2.99:80,3,0	0/1:29,0:28:99:161,0,204	0/1:33,1:33:85.25:279,0,85	0/1:16,0:21:9.81:10,0,122
chr10	20538003	.	CTGGGATT	C	4306.69	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=11.304;DP=634;FS=1.055;HRun=0;HaplotypeScore=147.3778;InbreedingCoeff=0.9984;MQ=83.05;MQ0=0;MQRankSum=-10.220;QD=66.26;ReadPosRankSum=0.604;VQSLOD=4.5537;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:63.20:0,63,2353	0/0:10,0:10:30.10:0,30,1127	0/0:20,0:20:48.61:0,49,1858	0/0:20,0:20:57.20:0,57,2164	0/0:22,0:22:66.23:0,66,2477	0/0:12,0:11:36.12:0,36,1443	0/0:31,0:31:90.28:0,90,3428	1/1:0,21:21:60.07:1398,60,0	0/0:25,0:25:75.25:0,75,2934	0/0:32,0:32:93.30:0,93,3441	0/0:11,0:11:33.10:0,33,1244	0/0:28,0:28:81.24:0,81,3060	0/0:35,0:35:99:0,99,3477	0/0:21,0:21:63.19:0,63,2364	0/0:41,0:41:99:0,120,4716	0/0:31,0:31:93.27:0,93,3322	0/0:27,0:27:78.27:0,78,3078	0/0:28,0:28:84.27:0,84,3262	0/0:16,0:16:42.11:0,42,1246	0/0:19,0:19:48.14:0,48,1712	0/0:35,0:35:99:0,105,3911	0/0:11,0:11:33.09:0,33,1112	0/0:29,0:29:81.28:0,81,3211	0/0:26,0:26:75.26:0,75,3070	0/0:18,0:18:54.17:0,54,2071	1/1:2,21:23:38.20:1545,38,0	1/1:1,12:12:30.10:799,30,0	1/1:0,8:8:21.07:565,21,0
chr10	20539751	.	TACACACACAC	T	4076.79	PASS	AB=0.583;AC=24;AF=0.462;AN=52;BaseQRankSum=2.018;DP=792;FS=0.000;HRun=0;HaplotypeScore=259.7976;InbreedingCoeff=0.7978;MQ=48.57;MQ0=11;MQRankSum=-7.253;QD=11.92;ReadPosRankSum=0.156;VQSLOD=2.2137;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:38:36.45:0,36,2060	0/0:13,0:14:24.08:0,24,902	./.	./.	0/0:19,0:20:35.38:0,35,1432	1/1:12,22:34:17.63:454,18,0	1/1:13,9:22:3.83:92,4,0	0/0:36,0:39:60.02:0,60,1423	1/1:12,16:29:21.07:612,21,0	1/1:17,19:36:54.18:1381,54,0	0/1:4,13:17:0:0,0,0	1/1:5,16:23:12.04:344,12,0	1/1:5,14:19:21.07:632,21,0	1/1:14,13:28:5.16:180,5,0	0/0:10,0:23:27.09:0,27,460	0/0:14,0:31:36.11:0,36,1450	0/0:23,0:27:54.13:0,54,2066	0/0:20,0:37:57.19:0,57,2117	1/1:12,0:11:6.02:103,6,0	0/1:9,18:27:0.09:0,0,1	1/1:35,1:35:18.60:273,19,0	1/1:14,18:32:1.27:6,1,0	0/0:9,23:34:2.51:0,3,7	1/1:17,8:25:0.15:0,0,0	0/0:27,0:28:58.08:0,58,2545	0/0:14,0:20:43.69:0,44,1251	0/0:11,0:23:39.13:0,39,1467	0/0:3,0:12:21.07:0,21,786
chr10	20542445	.	TCCTCC	T	2272.68	PASS	AB=0.856;AC=19;AF=0.339;AN=56;BaseQRankSum=-3.308;DP=573;FS=16.024;HRun=0;HaplotypeScore=117.1185;InbreedingCoeff=0.1036;MQ=51.14;MQ0=36;MQRankSum=-4.446;QD=8.74;ReadPosRankSum=-2.232;VQSLOD=1.3936;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:41:85.60:0,86,1599	0/0:7,0:7:21.07:0,21,412	0/0:78,0:16:14.58:0,15,498	0/1:72,0:12:18.43:18,0,73	0/0:17,0:17:36.09:0,36,702	1/1:18,0:17:36.57:396,37,0	0/1:9,0:9:23.68:60,0,24	0/1:29,1:28:20.12:20,0,849	0/0:13,1:13:8.63:0,9,89	0/1:13,4:16:80.15:276,0,80	0/1:5,2:6:8.75:157,0,9	1/1:2,0:2:5.98:64,6,0	0/1:5,1:7:6.17:221,0,6	0/1:11,4:12:43.34:234,0,43	0/0:9,0:8:24.05:0,24,339	0/0:12,0:10:24.08:0,24,412	0/0:35,1:34:22.24:0,22,1084	0/0:21,0:19:45.13:0,45,730	0/1:9,5:15:56.62:397,0,57	0/1:12,3:13:31.15:140,0,31	0/1:6,2:6:0.78:30,0,1	1/1:4,1:3:6.02:118,6,0	1/1:6,2:10:10.64:226,11,0	0/0:4,0:4:2.26:0,2,9	0/0:24,0:18:35.93:0,36,587	0/1:26,0:22:87.13:87,0,603	0/0:27,0:22:32:0,32,591	0/0:19,0:16:1.68:0,2,324
chr10	20542495	.	TGCGCTTG	T	9409.89	PASS	AB=0.568;AC=23;AF=0.442;AN=52;BaseQRankSum=4.463;DP=323;FS=54.659;HRun=0;HaplotypeScore=82.3614;InbreedingCoeff=0.5194;MQ=33.54;MQ0=20;MQRankSum=-7.665;QD=58.45;ReadPosRankSum=1.153;VQSLOD=2.7417;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:27:27.08:0,27,1020	0/0:7,0:6:11.97:0,12,335	./.	./.	0/0:9,0:8:3.01:0,3,123	1/1:0,9:8:24.08:669,24,0	0/1:4,6:8:99:320,0,111	0/0:7,0:6:6.02:0,6,251	0/1:2,16:18:74.04:1289,0,74	0/1:3,14:17:99:1065,0,203	1/1:1,10:9:20.92:453,21,0	1/1:3,8:8:20.82:586,21,0	0/1:1,10:11:70.83:724,0,71	1/1:1,10:10:30.10:837,30,0	0/0:11,0:7:18.06:0,18,698	0/0:12,0:9:9.03:0,9,345	0/0:17,0:14:33.11:0,33,1278	0/0:22,0:19:30.10:0,30,1145	1/1:0,11:11:30.10:752,30,0	1/1:2,16:15:39.04:929,39,0	1/1:1,7:7:14.97:291,15,0	1/1:2,5:5:12.04:335,12,0	1/1:0,11:11:33.11:921,33,0	0/1:3,5:6:99:239,0,113	0/0:10,0:3:3.01:0,3,121	0/0:13,0:11:24.08:0,24,956	0/0:17,0:14:21.07:0,21,717	0/0:7,0:7:15.05:0,15,576
chr10	20542832	.	CG	C	9249.41	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-14.034;DP=542;FS=1.038;HRun=1;HaplotypeScore=76.7730;InbreedingCoeff=0.9992;MQ=80.34;MQ0=0;MQRankSum=-2.741;QD=38.22;ReadPosRankSum=3.576;VQSLOD=5.5246;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,29:29:81.27:1133,81,0	1/1:0,9:9:27.09:377,27,0	0/0:13,0:13:39.09:0,39,533	0/0:16,0:16:47.42:0,47,630	1/1:0,13:13:33.07:439,33,0	0/0:16,0:16:48.16:0,48,762	0/0:25,0:25:75.23:0,75,1169	1/1:0,24:24:63.21:879,63,0	0/0:20,0:20:57.19:0,57,909	0/0:18,0:18:51.13:0,51,782	0/0:9,0:9:24.08:0,24,383	0/0:30,0:30:90.29:0,90,1404	0/0:29,0:29:87.24:0,87,1306	0/0:20,0:20:57.19:0,57,909	1/1:0,20:20:54.16:755,54,0	1/1:0,19:19:54.18:755,54,0	1/1:0,33:33:96.32:1342,96,0	1/1:0,28:28:69.22:960,69,0	0/0:19,0:19:54.17:0,54,836	0/0:11,0:11:33.11:0,33,525	0/0:33,0:33:99:0,99,1551	0/0:12,0:12:32.86:0,33,440	0/0:11,0:11:29.93:0,30,416	0/0:18,0:18:54.18:0,54,862	1/1:0,12:12:36.12:503,36,0	1/1:1,33:34:51.35:1275,51,0	1/1:1,10:11:33.11:456,33,0	1/1:0,10:10:27.09:377,27,0
chr10	20543204	.	CTCT	C	4247.35	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=11.616;DP=683;FS=2.594;HRun=0;HaplotypeScore=98.6787;InbreedingCoeff=0.9767;MQ=69.69;MQ0=0;MQRankSum=-5.951;QD=48.82;ReadPosRankSum=-0.823;VQSLOD=6.8444;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,151,3694	0/0:8,0:8:24.08:0,24,589	0/0:8,0:7:13.79:0,14,362	0/0:13,0:13:31.65:0,32,589	0/0:23,0:23:69.22:0,69,1651	0/0:24,0:24:69.24:0,69,1700	0/0:34,0:34:99:0,102,2465	1/1:0,22:22:60.19:1087,60,0	0/0:23,0:23:69.24:0,69,1700	0/0:26,0:26:78.27:0,78,1898	0/0:19,0:19:57.20:0,57,1404	0/0:27,0:27:78.27:0,78,1917	0/0:28,0:28:84.29:0,84,2024	0/0:20,0:20:57.18:0,57,1349	0/0:26,0:26:78.25:0,78,1837	0/0:29,0:29:87.30:0,87,2128	0/0:33,0:33:99:0,99,2439	0/0:41,0:41:99:0,123,2992	0/0:17,0:17:51.17:0,51,1197	0/0:27,0:27:78.27:0,78,1900	0/0:36,0:36:99:0,108,2578	0/0:20,0:20:60.21:0,60,1476	0/0:15,0:15:45.15:0,45,1106	0/0:35,0:35:99:0,105,2486	0/0:14,0:14:42.14:0,42,1035	1/1:1,32:33:25.33:1657,25,0	1/1:0,27:27:72.25:1336,72,0	1/1:0,5:5:9.03:168,9,0
chr10	20543381	.	T	TG	4401.22	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=18.775;DP=675;FS=2.225;HRun=6;HaplotypeScore=124.2121;InbreedingCoeff=0.9294;MQ=63.27;MQ0=0;MQRankSum=-3.633;QD=12.36;ReadPosRankSum=1.627;VQSLOD=3.2306;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:90.19:0,90,908	0/0:12,0:12:33.07:0,33,336	0/1:15,0:14:12.73:13,0,204	0/0:5,0:5:15.03:0,15,153	0/0:28,0:28:72.15:0,72,727	1/1:27,0:27:56.01:360,56,0	1/1:27,0:27:64.56:404,65,0	0/0:30,0:30:72.16:0,72,733	1/1:29,3:32:66.63:433,67,0	1/1:28,0:28:55.42:380,55,0	1/1:17,0:17:31.83:215,32,0	1/1:18,2:20:50.34:310,50,0	1/1:24,0:24:53.28:336,53,0	1/1:21,0:21:42.30:268,42,0	0/0:21,0:21:57.11:0,57,575	0/0:25,0:25:72.15:0,72,727	0/0:37,0:37:99:0,102,1034	0/0:28,0:28:81.18:0,81,826	1/1:23,0:23:54.78:362,55,0	1/1:20,0:20:39.74:291,40,0	1/1:47,1:48:54.95:354,55,0	1/1:19,0:19:32.52:198,33,0	1/1:14,1:15:22.94:132,23,0	1/1:20,0:20:52.83:344,53,0	0/0:19,0:19:45.09:0,45,455	0/0:30,0:30:78.15:0,78,784	0/0:34,0:34:93.14:0,93,920	0/0:16,0:16:45.10:0,45,459
chr10	20543385	.	GGGT	G	11724.91	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=18.938;DP=670;FS=1.339;HRun=0;HaplotypeScore=120.7604;InbreedingCoeff=0.9974;MQ=62.07;MQ0=0;MQRankSum=-3.610;QD=35.42;ReadPosRankSum=2.840;VQSLOD=5.7445;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,102,1886	0/0:13,0:13:36.10:0,36,705	0/0:13,0:12:29.94:0,30,470	0/0:5,0:5:15.05:0,15,274	0/0:27,0:27:72.23:0,72,1478	1/1:1,26:27:57.19:941,57,0	1/1:1,27:28:66.23:1089,66,0	0/0:34,0:34:85.63:0,86,1539	1/1:3,28:31:68.89:1039,69,0	1/1:3,23:26:63.21:1028,63,0	1/1:0,17:17:32.98:510,33,0	1/1:3,17:20:54.05:853,54,0	1/1:0,24:24:57.06:902,57,0	1/1:2,17:19:44.88:675,45,0	0/0:20,0:20:57.17:0,57,1128	0/0:27,0:27:78.26:0,78,1567	0/0:38,0:38:99:0,111,2098	0/0:28,0:28:84.29:0,84,1711	1/1:1,21:22:63.18:981,63,0	1/1:1,20:21:53.96:797,54,0	1/1:5,40:45:68.95:1062,69,0	1/1:1,16:17:36.12:593,36,0	1/1:2,11:13:24.08:397,24,0	1/1:0,21:21:54.08:859,54,0	0/0:19,0:19:48.15:0,48,985	0/0:31,0:31:84.21:0,84,1515	0/0:35,0:35:99:0,105,2059	0/0:15,0:15:45.15:0,45,929
chr10	20544713	.	G	GT	5238.91	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-11.992;DP=492;FS=4.109;HRun=10;HaplotypeScore=48.8488;InbreedingCoeff=0.9503;MQ=74.11;MQ0=0;MQRankSum=-1.261;QD=20.87;ReadPosRankSum=-0.505;VQSLOD=5.5727;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,17:21:42.58:449,43,0	1/1:0,7:7:21.05:224,21,0	0/0:7,0:8:11.02:0,11,80	0/0:11,0:11:5.99:0,6,128	1/1:12,36:49:40.10:1003,40,0	0/0:17,0:17:41.93:0,42,345	0/0:9,0:9:17.96:0,18,144	1/1:12,23:36:59.95:606,60,0	0/0:17,0:17:41.90:0,42,341	0/0:25,0:25:52.95:0,53,425	0/0:15,0:16:34.97:0,35,277	0/0:15,0:16:43.99:0,44,351	0/0:11,0:11:28.78:0,29,226	0/0:8,0:8:17.97:0,18,148	0/0:13,0:13:35.94:0,36,295	1/1:0,17:17:45.11:480,45,0	1/1:3,19:22:33.08:352,33,0	1/1:3,12:15:27.07:288,27,0	0/0:19,0:20:52.95:0,53,421	0/0:28,0:28:68.90:0,69,566	0/0:10,0:10:23.95:0,24,197	0/0:11,0:11:26.95:0,27,222	0/0:13,0:13:32.95:0,33,271	0/0:8,0:8:23.97:0,24,197	1/1:4,14:18:11.45:327,11,0	1/1:5,10:15:8.41:285,8,0	1/1:5,18:24:7.81:482,8,0	1/1:2,25:27:50.54:743,51,0
chr10	20545911	.	T	TA	6411.86	PASS	AB=0.612;AC=41;AF=0.732;AN=56;BaseQRankSum=1.549;DP=718;FS=0.000;HRun=14;HaplotypeScore=133.9174;InbreedingCoeff=0.6587;MQ=77.13;MQ0=1;MQRankSum=-0.736;QD=11.43;ReadPosRankSum=2.637;VQSLOD=3.4794;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:19,23:46:23.70:366,0,24	1/1:3,12:17:19.41:268,19,0	0/0:35,0:29:5.06:0,5,57	0/0:15,0:13:7.65:0,8,51	1/1:12,19:32:12.21:319,12,0	0/1:3,8:13:11.83:133,0,12	0/1:11,12:25:2.86:204,0,3	0/0:33,0:33:48.64:0,49,415	1/1:6,21:27:9.46:331,9,0	1/1:8,15:26:47.57:376,48,0	1/1:7,16:24:17.45:261,17,0	1/1:8,13:23:32.47:252,32,0	1/1:5,16:21:14.25:210,14,0	1/1:6,20:26:25.72:350,26,0	1/1:6,15:22:7.57:179,8,0	1/1:3,4:25:52.06:316,52,0	1/1:6,5:32:35.47:299,35,0	1/1:7,2:31:16.12:213,16,0	1/1:8,12:22:9.34:302,9,0	1/1:7,15:23:38.73:310,39,0	1/1:2,11:15:35.68:292,36,0	1/1:6,18:28:20.64:356,21,0	1/1:9,13:24:22.49:302,22,0	1/1:4,29:34:36.88:476,37,0	1/1:5,18:23:10.52:296,11,0	0/0:32,2:38:23.59:0,24,385	0/0:27,0:30:31.68:0,32,355	0/0:5,0:5:8.85:0,9,58
chr10	20546614	.	T	TAA	10061.26	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-16.027;DP=606;FS=5.986;HRun=10;HaplotypeScore=92.7762;InbreedingCoeff=0.9657;MQ=78.03;MQ0=1;MQRankSum=-4.628;QD=27.34;ReadPosRankSum=-1.889;VQSLOD=4.4862;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:45:93.28:0,93,404	0/0:3,0:17:38.41:0,38,166	0/0:17,0:17:19.63:0,20,264	0/0:16,0:14:15.01:0,15,149	0/0:5,0:24:52.51:0,53,239	1/1:5,19:25:53.67:770,54,0	1/1:3,22:29:62.18:869,62,0	1/1:9,0:25:13.81:124,14,0	1/1:1,12:15:35.09:464,35,0	1/1:2,17:19:51.14:736,51,0	1/1:4,12:17:32.55:417,33,0	1/1:2,11:12:21.07:313,21,0	1/1:1,23:25:56.68:814,57,0	1/1:2,15:17:38.62:546,39,0	0/0:2,0:20:49.40:0,49,214	0/0:1,0:23:54.87:0,55,237	0/0:2,0:46:99:0,107,463	0/0:1,0:13:30.19:0,30,131	1/1:4,17:22:56.68:808,57,0	1/1:3,10:16:38.61:523,39,0	1/1:1,20:22:54.18:805,54,0	1/1:2,21:23:63.17:902,63,0	1/1:2,21:25:60.10:866,60,0	1/1:4,18:22:51.17:760,51,0	0/0:2,0:17:32.93:0,33,142	1/1:4,1:21:42.05:184,42,0	1/1:4,0:20:2.69:74,3,0	1/1:1,0:12:24.95:88,25,0
chr10	20547260	.	T	TG	13734.01	PASS	AB=0.625;AC=51;AF=0.911;AN=56;BaseQRankSum=-5.241;DP=690;FS=1.260;HRun=8;HaplotypeScore=101.6247;InbreedingCoeff=0.7473;MQ=74.86;MQ0=0;MQRankSum=-6.897;QD=21.66;ReadPosRankSum=6.316;VQSLOD=4.2598;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,26:33:38.74:700,39,0	1/1:0,5:5:12.04:138,12,0	0/0:27,0:27:61.17:0,61,504	0/0:27,0:26:47.88:0,48,451	1/1:5,12:17:39.11:442,39,0	1/1:4,17:21:42.08:470,42,0	1/1:6,31:37:87.26:1001,87,0	1/1:11,0:22:35.28:192,35,0	1/1:9,22:31:83.03:920,83,0	1/1:11,19:30:48.14:552,48,0	1/1:2,16:18:35.62:397,36,0	1/1:6,25:31:60.18:692,60,0	1/1:3,27:30:41.74:734,42,0	1/1:2,20:22:47.97:553,48,0	1/1:4,29:33:81.24:929,81,0	1/1:7,15:22:14.66:422,15,0	1/1:5,23:27:57.17:657,57,0	1/1:6,18:24:45.13:518,45,0	0/1:6,9:15:21.84:279,0,22	1/1:7,17:24:48.14:554,48,0	1/1:11,22:33:26.69:561,27,0	1/1:6,15:21:42.12:485,42,0	1/1:2,19:21:48.14:553,48,0	1/1:6,31:36:75.09:865,75,0	1/1:3,24:27:44.74:755,45,0	1/1:6,0:14:14.34:78,14,0	1/1:4,1:27:40.44:224,40,0	1/1:4,0:11:11.53:64,12,0
chr10	20548137	.	T	TC	7251.97	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-17.159;DP=653;FS=1.460;HRun=1;HaplotypeScore=90.7965;InbreedingCoeff=0.9880;MQ=70.73;MQ0=0;MQRankSum=-0.965;QD=41.68;ReadPosRankSum=0.126;VQSLOD=4.9002;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:93.28:0,93,1190	0/0:13,0:13:36.08:0,36,436	0/0:7,0:7:8.73:0,9,109	0/0:19,0:16:45.09:0,45,513	0/0:14,0:14:36.12:0,36,467	0/0:17,0:17:51.17:0,51,662	0/0:16,0:16:48.14:0,48,607	1/1:0,29:29:84.26:1213,84,0	0/0:27,0:27:81.25:0,81,1036	0/0:37,0:37:99:0,108,1347	0/0:14,0:14:42.12:0,42,530	0/0:24,0:24:69.19:0,69,856	0/0:25,0:25:69.20:0,69,868	0/0:22,0:22:63.20:0,63,818	0/0:20,0:20:60.17:0,60,750	1/1:0,14:14:36.12:540,36,0	1/1:1,36:37:99:1574,105,0	1/1:0,28:28:75.25:1124,75,0	0/0:20,0:20:57.17:0,57,725	0/0:14,0:14:42.11:0,42,516	0/0:49,0:49:99:0,141,1815	0/0:19,0:19:57.18:0,57,728	0/0:21,0:21:63.17:0,63,778	0/0:41,0:41:99:0,117,1498	0/0:27,0:27:81.25:0,81,1038	1/1:1,26:26:78.25:1141,78,0	1/1:1,31:32:90.30:1345,90,0	1/1:0,7:7:21.07:315,21,0
chr10	20548646	.	C	CA	3652.93	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-10.616;DP=690;FS=0.859;HRun=4;HaplotypeScore=66.6156;InbreedingCoeff=0.9807;MQ=77.61;MQ0=1;MQRankSum=-0.639;QD=38.86;ReadPosRankSum=3.347;VQSLOD=2.9066;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,108,1213	0/0:8,0:8:24.07:0,24,272	0/0:16,0:16:39.11:0,39,439	0/0:14,0:14:9.61:0,10,291	0/0:22,0:22:60.15:0,60,670	0/0:27,0:27:75.21:0,75,851	0/0:27,0:27:78.18:0,78,859	0/0:28,0:28:81.21:0,81,903	0/0:32,0:32:96.26:0,96,1079	0/0:25,0:25:66.18:0,66,742	0/0:15,0:15:42.11:0,42,467	0/0:31,0:31:84.24:0,84,952	0/0:33,0:33:96.24:0,96,1068	0/0:29,0:29:84.21:0,84,933	0/0:27,0:27:78.22:0,78,885	1/1:0,25:25:72.24:985,72,0	1/1:2,28:30:81.27:1108,81,0	1/1:1,38:39:99:1560,114,0	0/0:21,0:21:57.15:0,57,638	0/0:19,0:19:51.15:0,51,578	0/0:29,0:29:84.22:0,84,942	0/0:18,0:18:42.12:0,42,476	0/0:19,0:19:51.14:0,51,576	0/0:42,0:41:99:0,120,1361	0/0:17,0:17:48.14:0,48,544	0/0:21,0:21:60.16:0,60,673	0/0:30,0:30:84.20:0,84,938	0/0:9,0:9:27.08:0,27,306
chr10	20548936	.	C	CGTAA	11587.97	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-2.714;DP=715;FS=5.186;HRun=0;HaplotypeScore=113.0287;InbreedingCoeff=0.9952;MQ=80.52;MQ0=0;MQRankSum=-9.956;QD=65.84;ReadPosRankSum=0.555;VQSLOD=7.1651;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,132,2513	0/0:11,0:11:33.11:0,33,627	0/0:20,0:20:54.14:0,54,913	0/0:19,0:19:50.46:0,50,800	0/0:27,0:27:81.26:0,81,1536	0/0:18,0:18:51.16:0,51,954	0/0:37,0:37:99:0,108,2010	1/1:6,17:23:63.22:1656,63,0	0/0:26,0:26:75.23:0,75,1372	0/0:19,0:19:57.20:0,57,1104	0/0:14,0:14:42.14:0,42,814	0/0:20,0:20:57.20:0,57,1104	0/0:25,0:25:75.24:0,75,1399	0/0:34,0:34:96.32:0,96,1810	0/0:35,0:35:96.33:0,96,1850	1/1:1,25:27:66.17:1740,66,0	1/1:1,31:33:72.19:1905,72,0	1/1:1,29:31:81.28:2217,81,0	0/0:18,0:18:45.13:0,45,808	0/0:25,0:25:72.25:0,72,1395	0/0:52,0:52:99:0,153,2880	0/0:16,0:16:45.15:0,45,871	0/0:18,0:18:54.17:0,54,1011	0/0:36,0:36:93.28:0,93,1731	0/0:22,0:22:63.19:0,63,1185	1/1:3,22:26:17.15:1835,17,0	1/1:2,23:25:69.24:1885,69,0	1/1:3,8:11:15.02:350,15,0
chr10	20549068	.	G	GA	3767.44	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-9.768;DP=684;FS=3.784;HRun=3;HaplotypeScore=78.7318;InbreedingCoeff=0.9954;MQ=83.85;MQ0=0;MQRankSum=0.315;QD=36.58;ReadPosRankSum=1.205;VQSLOD=4.2462;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,36:38:93.27:1276,93,0	1/1:0,12:12:30.10:418,30,0	0/0:29,0:29:67.65:0,68,763	0/0:23,0:23:53.85:0,54,631	1/1:1,23:23:63.17:859,63,0	0/0:9,0:9:15.05:0,15,180	0/0:30,0:30:75.21:0,75,888	0/0:25,0:25:69.21:0,69,827	0/0:29,0:29:78.22:0,78,922	0/0:31,0:31:90.26:0,90,1066	0/0:18,0:18:51.16:0,51,612	0/0:17,0:17:45.14:0,45,540	0/0:22,0:22:60.18:0,60,720	0/0:21,0:21:60.17:0,60,707	0/0:36,0:36:99:0,99,1176	0/0:26,0:26:78.22:0,78,923	0/0:35,0:35:90.24:0,90,1055	0/0:30,0:30:81.25:0,81,972	0/0:18,0:18:54.17:0,54,648	0/0:17,0:17:51.16:0,51,612	0/0:18,0:18:51.16:0,51,612	0/0:21,0:21:60.14:0,60,693	0/0:23,0:23:69.20:0,69,817	0/0:32,0:32:93.24:0,93,1099	1/1:1,28:29:87.29:1215,87,0	0/0:22,0:22:60.18:0,60,720	0/0:35,0:35:96.28:0,96,1139	0/0:14,0:14:42.13:0,42,504
chr10	20550153	.	CT	C	18925.82	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=8.991;DP=623;FS=0.000;HRun=1;HaplotypeScore=83.5632;InbreedingCoeff=0.9995;MQ=95.33;MQ0=0;MQRankSum=-8.233;QD=36.96;ReadPosRankSum=6.184;VQSLOD=4.7812;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,25:25:57.19:796,57,0	1/1:0,9:9:27.09:375,27,0	0/0:32,0:32:96.31:0,96,1374	0/0:26,0:26:72.13:0,72,968	1/1:0,34:34:90.24:1215,90,0	1/1:0,21:21:54.18:754,54,0	1/1:0,20:20:45.15:628,45,0	1/1:0,22:22:66.19:873,66,0	1/1:0,21:21:60.20:837,60,0	1/1:0,31:31:90.29:1233,90,0	1/1:0,18:18:48.16:663,48,0	1/1:0,23:23:60.20:838,60,0	1/1:0,16:16:45.15:624,45,0	1/1:0,10:10:30.10:419,30,0	1/1:0,14:14:36.12:503,36,0	1/1:0,24:24:69.23:961,69,0	0/0:28,0:28:84.23:0,84,1190	0/0:25,0:25:68.01:0,68,1045	1/1:0,18:18:48.05:576,48,0	1/1:0,20:20:54.18:752,54,0	1/1:0,22:22:54.18:754,54,0	1/1:0,27:27:66.22:901,66,0	1/1:0,26:26:75.25:1043,75,0	1/1:0,24:24:66.22:921,66,0	1/1:0,19:19:45.15:628,45,0	1/1:0,30:30:87.29:1213,87,0	1/1:0,22:22:57.19:792,57,0	1/1:0,16:16:45.15:627,45,0
chr10	20550707	.	G	GTCT	3559.33	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-2.970;DP=599;FS=1.690;HRun=0;HaplotypeScore=115.9544;InbreedingCoeff=0.9987;MQ=90.07;MQ0=1;MQRankSum=-5.201;QD=49.44;ReadPosRankSum=-0.471;VQSLOD=5.7125;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,22:25:63.22:1387,63,0	1/1:0,9:9:27.06:550,27,0	0/0:22,0:22:48.15:0,48,748	0/0:28,0:27:53.27:0,53,843	1/1:2,18:21:48.03:892,48,0	0/0:22,0:22:60.20:0,60,962	0/0:24,0:24:66.21:0,66,1031	0/0:33,0:33:66.20:0,66,985	0/0:20,0:20:54.18:0,54,868	0/0:28,0:28:81.28:0,81,1296	0/0:14,0:14:36.12:0,36,577	0/0:32,0:32:90.31:0,90,1445	0/0:21,0:21:57.19:0,57,916	0/0:21,0:21:60.20:0,60,964	0/0:24,0:24:66.21:0,66,1037	0/0:17,0:17:48.15:0,48,747	0/0:26,0:26:78.27:0,78,1246	0/0:23,0:23:63.21:0,63,1012	0/0:26,0:26:72.21:0,72,1106	0/0:10,0:10:27.09:0,27,422	0/0:26,0:26:63.21:0,63,1010	0/0:24,0:24:63.21:0,63,998	0/0:11,0:11:24.08:0,24,385	0/0:19,0:19:54.17:0,54,843	1/1:1,12:16:36.08:729,36,0	0/0:27,0:27:72.25:0,72,1153	0/0:17,0:17:48.16:0,48,764	0/0:12,0:12:33.11:0,33,529
chr10	20551063	.	TTG	T	1286.47	PASS	AB=0.978;AC=30;AF=0.600;AN=50;BaseQRankSum=3.604;DP=513;FS=3.131;HRun=0;HaplotypeScore=71.7453;InbreedingCoeff=0.5284;MQ=66.41;MQ0=7;MQRankSum=0.659;QD=4.30;ReadPosRankSum=1.994;VQSLOD=2.0301;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:40:17.04:83,17,0	0/0:6,0:8:0:0,0,0	./.	./.	1/1:4,0:7:2.84:14,3,0	1/1:8,3:11:3.01:33,3,0	1/1:23,6:30:18.35:178,18,0	0/0:23,0:23:2.97:0,3,20	0/0:12,0:12:12.01:0,12,151	0/1:21,1:20:18.38:31,0,18	1/1:7,0:8:6.01:58,6,0	1/1:14,7:22:32.74:313,33,0	1/1:14,3:19:14.70:126,15,0	1/1:8,2:10:3.01:33,3,0	0/0:15,0:15:21.03:0,21,262	0/0:16,0:24:5.98:0,6,50	0/0:21,0:32:3.46:0,3,27	0/0:17,0:26:6.88:0,7,54	1/1:19,0:18:2.97:20,3,0	1/1:5,2:8:8.86:79,9,0	1/1:29,2:31:12.03:130,12,0	1/1:6,2:8:3.01:33,3,0	./.	1/1:15,10:26:26.74:256,27,0	1/1:9,0:14:11.36:56,11,0	0/1:22,0:21:10.31:10,0,119	0/0:10,0:9:9.03:0,9,134	0/0:10,0:10:12.02:0,12,157
chr10	20551682	.	GGT	G	176.44	PASS	AB=0.980;AC=17;AF=0.327;AN=52;BaseQRankSum=0.870;DP=861;FS=4.656;HRun=0;HaplotypeScore=226.6384;InbreedingCoeff=0.0452;MQ=50.10;MQ0=33;MQRankSum=-2.108;QD=0.35;ReadPosRankSum=-0.213;VQSLOD=2.6026;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:55,1:54:26.30:26,0,30	0/1:14,0:13:4.80:5,0,23	./.	./.	0/0:20,0:18:3.40:0,3,37	0/1:25,0:24:0.17:1,0,0	0/1:31,0:28:0:0,0,0	0/0:25,0:21:8.50:0,8,62	0/0:38,0:38:2.26:0,2,16	0/1:39,0:38:13.10:13,0,108	0/0:13,0:12:2.99:0,3,24	1/1:41,0:41:7.90:44,8,0	0/1:37,0:37:50.87:51,0,52	0/0:50,0:49:12.01:0,12,66	0/1:32,0:31:0.08:0,0,0	0/0:22,0:22:20.25:0,20,150	0/0:29,0:29:10.20:0,10,66	0/0:29,0:28:13.43:0,13,171	0/1:29,0:27:3.81:4,0,41	0/0:18,0:17:1.82:0,2,6	0/1:60,0:54:0:0,0,1	0/1:31,0:30:0:0,0,0	0/0:19,0:19:3.45:0,3,23	1/1:40,0:39:0.11:1,0,0	0/0:24,0:24:12.75:0,13,126	0/1:35,0:34:8.72:76,0,9	0/1:16,1:17:5.57:51,0,6	0/1:10,3:12:13.07:24,0,13
chr10	20551715	.	G	GCGTC	1608.68	PASS	AB=0.972;AC=20;AF=0.370;AN=54;BaseQRankSum=1.309;DP=1066;FS=13.731;HRun=0;HaplotypeScore=429.1558;InbreedingCoeff=-0.2490;MQ=32.77;MQ0=65;MQRankSum=-4.547;QD=2.00;ReadPosRankSum=2.918;VQSLOD=0.4486;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:68,0:64:24.65:0,25,308	0/0:18,0:17:13.85:0,14,211	./.	0/0:8,0:1:3.01:0,3,56	0/0:38,0:33:16.28:0,16,255	0/1:35,0:34:32.21:74,0,32	0/1:51,1:43:57.22:57,0,80	0/1:56,0:48:99:161,0,426	0/1:48,2:47:82.30:164,0,82	0/1:60,2:51:99:326,0,677	1/1:26,0:25:5.84:49,6,0	0/1:46,3:48:75.66:152,0,76	0/1:41,3:43:99:276,0,189	0/1:65,4:66:99:104,0,182	0/1:32,4:34:12.37:12,0,18	0/0:27,0:27:35.12:0,35,450	0/1:31,0:31:2.16:2,0,291	0/0:35,0:34:33.18:0,33,576	0/1:42,2:40:99:283,0,190	0/1:29,0:28:5.43:5,0,31	0/1:68,0:59:0.59:1,0,1	0/1:39,0:38:0.80:1,0,63	0/1:21,1:20:11.49:31,0,11	1/1:38,4:41:1.25:4,1,0	0/0:26,0:26:14.98:0,15,273	0/1:51,0:47:52.78:53,0,830	0/0:23,0:23:18.06:0,18,473	0/0:14,0:12:20.52:0,21,207
chr10	20551717	.	G	GCGTC	2893.11	PASS	AB=0.959;AC=23;AF=0.426;AN=54;BaseQRankSum=-3.196;DP=1057;FS=0.846;HRun=0;HaplotypeScore=425.6057;InbreedingCoeff=0.0891;MQ=32.59;MQ0=64;MQRankSum=-0.793;QD=3.76;ReadPosRankSum=0.684;VQSLOD=0.1826;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:66,0:62:21.20:0,21,278	0/0:18,0:17:13.81:0,14,179	./.	0/0:7,0:1:2.94:0,3,18	0/0:40,0:35:16.42:0,16,255	1/1:31,4:35:9.47:281,9,0	0/1:53,1:45:99:163,0,123	0/1:57,0:48:29.46:29,0,669	0/1:47,2:46:93.25:195,0,93	0/1:57,4:50:99:426,0,568	1/1:25,1:25:1.29:13,1,0	0/1:45,2:46:52.62:378,0,53	0/1:38,6:43:79.72:693,0,80	0/1:61,6:64:99:130,0,147	1/1:33,2:33:7.61:111,8,0	0/0:27,0:27:41.24:0,41,513	0/0:31,0:31:29.17:0,29,443	0/0:33,0:32:65.66:0,66,748	0/1:43,0:39:99:193,0,236	0/1:28,3:30:11.19:48,0,11	0/1:64,0:56:0.59:1,0,1	1/1:36,3:38:11.37:117,11,0	1/1:22,1:21:5:169,5,0	1/1:42,0:41:5.72:79,6,0	0/0:26,0:26:14.98:0,15,273	0/1:52,0:48:34.33:34,0,802	0/0:23,0:23:31.86:0,32,432	0/0:15,0:13:22.19:0,22,213
chr10	20551719	.	G	GTA	277.52	PASS	AB=0.948;AC=15;AF=0.288;AN=52;BaseQRankSum=0.428;DP=1037;FS=3.220;HRun=0;HaplotypeScore=433.1710;InbreedingCoeff=-0.0972;MQ=31.99;MQ0=62;MQRankSum=-0.992;QD=0.51;ReadPosRankSum=4.712;VQSLOD=0.0978;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:64,0:60:18.59:0,19,134	0/0:18,0:17:8.94:0,9,89	./.	./.	0/0:38,0:33:12.62:0,13,119	0/1:31,4:34:30.51:31,0,33	0/0:53,1:45:18.51:0,19,131	0/1:57,0:48:18.33:18,0,443	0/1:47,2:46:22.34:22,0,49	0/1:52,3:45:66.30:66,0,402	0/1:25,1:25:12.76:17,0,13	0/1:44,2:45:36.55:44,0,37	0/1:35,6:42:80.40:116,0,80	0/1:59,5:62:12.98:13,0,48	0/1:32,2:32:0.36:0,0,0	0/1:27,0:27:26.15:26,0,167	0/0:32,0:32:47.79:0,48,304	0/0:31,0:30:37.81:0,38,380	0/1:43,0:39:32.19:32,0,379	0/0:27,3:29:4.20:0,4,26	0/0:63,0:56:1.21:0,1,3	0/0:34,3:36:2.11:0,2,4	1/1:23,1:22:2.81:21,3,0	1/1:42,0:41:0.23:11,0,0	0/0:26,0:26:16.32:0,16,183	0/0:53,0:49:35.98:0,36,554	0/0:23,0:23:26.07:0,26,249	0/0:15,0:13:16.82:0,17,103
chr10	20551723	.	GTGTGTC	G	2063.28	PASS	AB=0.997;AC=27;AF=0.500;AN=54;BaseQRankSum=-5.325;DP=1052;FS=1.406;HRun=0;HaplotypeScore=448.5546;InbreedingCoeff=-0.3442;MQ=31.06;MQ0=59;MQRankSum=0.411;QD=2.42;ReadPosRankSum=4.664;VQSLOD=0.7731;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:62,0:59:4.39:0,4,39	0/1:17,0:16:0.78:25,0,1	0/0:3,0:1:2.99:0,3,24	./.	0/0:38,0:33:1.16:0,1,31	0/1:36,0:35:7.85:110,0,8	1/1:54,0:45:18.99:142,19,0	0/1:57,0:47:40.66:41,0,54	1/1:49,0:46:9.43:199,9,0	0/1:56,1:46:99:381,0,308	0/1:26,1:26:5.43:16,0,5	1/1:43,2:44:11.75:155,12,0	0/1:45,0:44:48.76:374,0,49	0/1:67,0:65:51.05:51,0,64	0/1:35,0:33:10.83:11,0,15	0/1:25,0:25:69.25:69,0,85	0/1:36,0:36:50:50,0,131	0/1:29,0:29:65.92:66,0,370	0/1:44,0:40:97.13:97,0,130	1/1:31,0:30:5.10:36,5,0	0/0:65,0:56:0.26:0,0,2	1/1:34,1:34:0.36:21,0,0	0/1:25,0:23:8.37:12,0,8	0/1:45,0:44:11.22:12,0,11	0/0:26,0:26:13.05:0,13,156	0/1:53,0:49:99:209,0,201	0/1:25,0:25:12.44:102,0,12	0/1:15,0:13:33.15:33,0,64
chr10	20551726	.	T	TGC	1101.50	PASS	AB=0.980;AC=16;AF=0.286;AN=56;BaseQRankSum=-3.585;DP=1055;FS=0.417;HRun=0;HaplotypeScore=419.0918;InbreedingCoeff=-0.1608;MQ=30.94;MQ0=56;MQRankSum=-2.004;QD=1.71;ReadPosRankSum=1.875;VQSLOD=0.7325;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:62,0:58:1.33:1,0,19	0/0:17,0:16:5.97:0,6,63	0/0:5,0:3:5.96:0,6,44	0/0:6,0:1:2.98:0,3,21	0/0:36,0:31:6.42:0,6,39	0/1:38,0:38:1.18:16,0,1	0/0:53,0:44:2.17:0,2,69	0/1:60,0:48:99:149,0,337	0/1:49,0:46:27.99:28,0,76	0/1:57,0:46:68.46:68,0,375	0/0:29,0:28:1.13:0,1,3	0/1:46,0:45:8.51:9,0,52	0/1:46,0:45:64.49:64,0,174	0/1:65,0:63:7.17:7,0,87	0/0:34,0:32:0.07:0,0,17	0/1:20,4:24:8.09:244,0,8	1/1:35,0:35:3.65:198,4,0	0/1:25,3:28:13.58:257,0,14	0/1:46,0:42:99:167,0,211	1/1:34,0:33:0.45:4,0,0	0/0:64,0:55:1.27:0,1,3	0/0:36,0:35:4.96:0,5,26	0/0:24,0:22:3.38:0,3,24	0/0:44,0:43:2.58:0,3,5	0/0:26,0:26:12.78:0,13,71	0/1:55,0:51:24.11:24,0,438	0/0:23,0:23:24.54:0,25,220	0/0:13,0:12:20.98:0,21,111
chr10	20551731	.	G	GTA	1191.56	PASS	AB=0.953;AC=23;AF=0.411;AN=56;BaseQRankSum=1.660;DP=1090;FS=17.959;HRun=0;HaplotypeScore=438.1091;InbreedingCoeff=-0.3064;MQ=30.69;MQ0=57;MQRankSum=-0.032;QD=1.43;ReadPosRankSum=6.323;VQSLOD=0.1747;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:55,10:62:0.13:0,0,2	0/0:14,3:16:6.52:0,7,28	0/0:10,0:4:12:0,12,155	0/0:13,0:3:6.01:0,6,73	1/1:31,4:30:1.37:6,1,0	0/1:36,1:37:33.17:68,0,33	0/1:53,2:46:17.49:17,0,56	0/1:61,1:49:37.23:37,0,481	0/1:52,1:50:2.10:2,0,48	0/1:59,0:48:99:144,0,167	0/0:26,3:28:3.38:0,3,9	0/1:43,2:44:9.68:12,0,10	0/1:43,3:45:65.86:134,0,66	0/1:62,1:61:19.88:20,0,52	0/0:35,0:33:0.49:0,0,2	0/1:22,4:26:54.61:55,0,147	0/1:30,1:31:96.26:96,0,386	0/1:31,1:32:45.52:46,0,525	0/1:46,0:42:99:115,0,383	1/1:26,2:33:2.48:35,2,0	0/0:62,6:60:1.68:0,2,4	0/0:39,2:40:1.92:0,2,4	0/1:22,1:21:0.08:0,0,0	0/0:45,1:45:2.62:0,3,6	1/1:24,4:28:6.48:56,6,0	0/1:53,4:53:99:271,0,411	0/1:20,2:22:43.70:159,0,44	0/1:12,1:12:24.16:56,0,24
chr10	20551738	.	T	TGC	4572.25	PASS	AB=0.833;AC=32;AF=0.571;AN=56;BaseQRankSum=-2.278;DP=1042;FS=18.265;HRun=0;HaplotypeScore=397.7517;InbreedingCoeff=-0.1815;MQ=31.99;MQ0=58;MQRankSum=-1.438;QD=5.37;ReadPosRankSum=2.307;VQSLOD=2.7180;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:40,22:59:0.32:36,0,0	0/1:12,3:14:10.97:40,0,11	0/0:16,0:4:12.01:0,12,158	0/0:22,0:5:8.70:0,9,101	1/1:20,14:30:2.11:56,2,0	1/1:23,14:37:5.51:131,6,0	1/1:38,13:43:23.03:260,23,0	0/1:35,2:25:90.94:215,0,91	1/1:34,18:49:4.26:206,4,0	0/1:37,18:44:86.14:870,0,86	1/1:19,9:27:0.43:4,0,0	0/1:35,14:49:7.81:120,0,8	0/1:34,12:45:54.11:441,0,54	0/1:42,20:60:23.68:181,0,24	0/1:17,14:29:0.26:0,0,8	0/1:24,1:25:21.20:21,0,198	0/1:36,0:36:99:101,0,376	0/1:31,0:31:66.55:67,0,543	0/1:25,6:27:99:422,0,233	1/1:20,13:33:1.68:40,2,0	0/0:62,4:59:7.66:0,8,22	0/0:27,13:39:2.27:0,2,4	1/1:17,5:21:2.04:13,2,0	0/0:31,15:45:2.58:0,3,5	1/1:16,10:26:0.75:13,1,0	0/1:42,14:53:99:814,0,194	1/1:13,8:21:4.87:369,5,0	0/1:8,3:10:13.26:153,0,13
chr10	20551739	.	GTC	G	2064.74	PASS	AB=0.949;AC=25;AF=0.446;AN=56;BaseQRankSum=-7.809;DP=1031;FS=7.469;HRun=0;HaplotypeScore=388.3859;InbreedingCoeff=-0.3052;MQ=32.42;MQ0=59;MQRankSum=-1.894;QD=2.43;ReadPosRankSum=5.503;VQSLOD=0.6292;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:63,0:60:1.86:37,0,2	1/1:14,1:14:19.65:115,20,0	0/0:17,0:4:12.04:0,12,211	0/0:24,0:5:8.60:0,9,119	0/1:34,0:30:12.40:12,0,31	0/1:36,3:39:15.45:75,0,15	1/1:51,0:43:12.86:87,13,0	0/1:33,1:22:87.19:99,0,87	0/1:48,2:49:32.33:46,0,32	0/1:53,3:45:99:346,0,162	0/0:25,1:25:7.38:0,7,21	0/1:44,4:47:16.85:112,0,17	0/1:35,10:44:9.57:351,0,10	0/1:56,3:58:32.33:56,0,32	0/1:26,3:27:8.63:9,0,20	0/1:23,1:24:21.03:21,0,175	0/1:36,0:36:48.59:49,0,408	0/0:28,0:28:9.08:0,9,698	0/1:27,2:25:99:108,0,173	0/1:30,4:34:1.66:23,0,2	1/1:65,1:60:10.75:112,11,0	0/0:37,4:40:2.22:0,2,6	0/1:21,2:22:1.91:55,0,2	0/0:44,2:45:11.32:0,11,29	0/1:25,0:25:6.95:27,0,7	0/1:50,3:51:99:395,0,219	0/1:22,0:22:26.87:67,0,27	0/1:10,0:9:24.40:24,0,36
chr10	20551741	.	C	CTG	5332.91	PASS	AB=0.805;AC=38;AF=0.679;AN=56;BaseQRankSum=-5.807;DP=1051;FS=3.516;HRun=0;HaplotypeScore=389.1000;InbreedingCoeff=0.0645;MQ=33.98;MQ0=60;MQRankSum=0.907;QD=6.03;ReadPosRankSum=2.092;VQSLOD=3.1701;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:44,21:62:2.84:42,3,0	1/1:12,3:14:14.15:143,14,0	0/0:19,0:5:11.97:0,12,155	0/0:26,0:6:8.53:0,9,108	1/1:21,13:30:4.84:34,5,0	1/1:24,13:37:12.02:221,12,0	1/1:38,13:43:23.80:306,24,0	0/1:30,3:19:57.41:162,0,57	1/1:29,25:53:9.63:249,10,0	0/1:34,21:44:60.97:965,0,61	1/1:17,10:26:1.41:42,1,0	0/1:27,23:50:9.54:201,0,10	0/1:28,13:40:49.15:497,0,49	0/1:37,21:57:11.37:235,0,11	1/1:17,15:30:1.90:38,2,0	1/1:22,0:22:14.80:80,15,0	1/1:37,0:37:6.59:75,7,0	0/1:29,0:29:42.41:45,0,42	0/1:24,6:26:99:408,0,114	0/0:22,12:34:3.51:0,4,7	1/1:65,6:65:10.60:201,11,0	0/0:18,19:36:2.27:0,2,4	1/1:20,5:24:8.21:90,8,0	0/0:19,30:49:2.58:0,3,5	1/1:20,7:28:2.30:45,2,0	0/1:38,14:50:89.10:834,0,89	1/1:13,10:23:18.26:257,18,0	1/1:8,3:10:3.37:165,3,0
chr10	20551746	.	T	TGC	1947.33	PASS	AB=0.984;AC=19;AF=0.339;AN=56;BaseQRankSum=0.286;DP=1080;FS=23.464;HRun=0;HaplotypeScore=391.5778;InbreedingCoeff=-0.3926;MQ=34.97;MQ0=58;MQRankSum=-2.507;QD=2.76;ReadPosRankSum=6.609;VQSLOD=0.6210;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:64,3:64:14.37:0,14,100	0/1:13,1:14:39.84:40,0,40	0/0:20,0:5:8.69:0,9,178	0/0:35,0:9:20.41:0,20,223	0/0:32,3:31:3.43:0,3,15	1/1:36,0:36:8.65:86,9,0	0/1:53,0:45:34.35:131,0,34	0/1:30,0:16:56.52:57,0,186	0/1:56,0:53:56.42:93,0,56	0/1:53,0:43:99:449,0,200	0/1:26,0:25:18.43:18,0,21	0/1:53,0:52:93.81:98,0,94	0/1:43,0:42:99:244,0,115	0/1:59,0:57:85.45:95,0,85	0/0:34,0:32:1.23:0,1,88	0/0:23,0:23:12.60:0,13,74	0/0:38,0:38:9.51:0,10,171	0/0:31,0:31:57.96:0,58,394	0/1:30,0:27:99:111,0,335	0/1:34,0:34:1.98:2,0,21	0/1:74,0:68:28.58:29,0,61	0/0:37,0:36:2.27:0,2,4	0/1:25,0:24:12.16:12,0,22	0/0:55,0:53:11.57:0,12,78	0/1:28,1:29:12.30:12,0,42	0/1:51,2:50:99:431,0,307	0/1:25,0:25:77.96:124,0,78	0/1:10,1:10:70.49:70,0,73
chr10	20551751	.	C	CTG	1956.40	PASS	AB=1.000;AC=16;AF=0.286;AN=56;BaseQRankSum=4.902;DP=1090;FS=6.478;HRun=0;HaplotypeScore=391.5184;InbreedingCoeff=0.0454;MQ=35.79;MQ0=56;MQRankSum=-5.969;QD=4.26;ReadPosRankSum=8.543;VQSLOD=0.7811;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:70,0:68:18.32:0,18,283	0/1:16,0:15:42.75:43,0,48	0/0:27,0:6:4.27:0,4,150	0/0:43,0:13:10.86:0,11,224	0/0:36,0:32:15.34:0,15,130	0/0:35,0:35:8.43:0,8,55	0/1:51,0:43:9.88:10,0,94	0/1:30,0:17:24.03:24,0,175	0/0:57,0:54:0.68:0,1,118	0/1:55,0:45:21.19:21,0,324	0/0:26,0:25:2.65:0,3,55	0/0:53,0:52:9.63:0,10,176	0/1:44,0:43:29.81:30,0,115	0/1:57,0:55:3.89:4,0,72	0/0:32,0:30:14.92:0,15,154	1/1:6,14:22:15.05:245,15,0	1/1:6,31:37:13.96:603,14,0	1/1:8,24:32:43.50:687,44,0	0/0:28,0:27:11.48:0,11,251	0/0:36,0:36:10.97:0,11,100	0/0:69,0:66:28.12:0,28,240	0/0:37,0:36:2.27:0,2,4	0/0:26,0:25:13.90:0,14,111	0/0:53,0:51:11.10:0,11,88	0/1:29,0:29:11.76:12,0,67	0/1:51,0:48:99:301,0,143	0/1:24,0:24:89.91:90,0,90	0/1:11,0:10:48.46:51,0,48
chr10	20551756	.	T	TGC	769.99	PASS	AB=0.991;AC=8;AF=0.143;AN=56;BaseQRankSum=1.767;DP=1100;FS=4.027;HRun=0;HaplotypeScore=393.9670;InbreedingCoeff=0.1469;MQ=36.62;MQ0=51;MQRankSum=-2.014;QD=3.48;ReadPosRankSum=5.626;VQSLOD=0.7002;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:67,2:67:37.21:0,37,449	0/1:17,0:16:1:1,0,141	0/1:37,0:6:1.66:2,0,178	0/0:47,0:14:29.09:0,29,356	0/0:35,0:32:21.67:0,22,263	0/0:35,0:35:21.64:0,22,189	0/0:51,0:45:37.28:0,37,294	0/0:26,0:15:20.80:0,21,378	0/0:58,0:55:42.99:0,43,354	0/0:55,0:46:99:0,122,984	0/0:26,0:25:10.30:0,10,110	0/0:55,0:54:53.45:0,53,476	0/0:45,0:44:77.89:0,78,549	0/0:58,0:56:31.81:0,32,305	0/0:30,0:29:15.19:0,15,218	1/1:20,0:20:14.64:126,15,0	0/1:35,2:37:19.83:337,0,20	0/1:32,0:32:22.11:349,0,22	0/0:25,0:23:18.12:0,18,386	0/0:38,0:38:15.23:0,15,167	0/0:74,0:69:43.39:0,43,507	0/0:36,0:35:2.27:0,2,4	0/0:24,0:23:15.43:0,15,206	0/0:54,0:52:11.57:0,12,117	0/0:28,0:28:14.89:0,15,143	0/1:52,0:49:39.66:40,0,663	0/1:26,0:26:43.37:43,0,233	0/0:10,0:10:1.64:0,2,146
chr10	20551758	.	T	TGC	934.28	PASS	AB=0.934;AC=9;AF=0.161;AN=56;BaseQRankSum=1.309;DP=1090;FS=0.561;HRun=0;HaplotypeScore=386.3304;InbreedingCoeff=0.0513;MQ=36.95;MQ0=47;MQRankSum=-2.346;QD=4.29;ReadPosRankSum=6.188;VQSLOD=1.1534;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:62,3:63:35.19:0,35,446	0/1:15,2:16:37.15:37,0,144	0/0:42,0:7:1.53:0,2,216	0/0:49,0:15:24.89:0,25,333	0/0:31,3:33:24.65:0,25,282	0/0:35,0:35:26.69:0,27,230	0/0:52,0:47:38.06:0,38,299	0/1:25,1:15:38.87:39,0,340	0/0:58,0:55:46.77:0,47,364	0/0:54,0:45:99:0,119,969	0/0:26,0:25:10.29:0,10,109	0/0:55,0:54:49.25:0,49,446	0/0:44,0:44:80.69:0,81,562	0/0:58,0:56:40.96:0,41,325	0/0:29,0:28:15.22:0,15,218	1/1:20,0:20:14.77:126,15,0	0/1:37,0:37:23.60:302,0,24	0/1:32,0:32:77.08:308,0,77	0/0:24,0:23:61.74:0,62,494	0/0:39,0:39:16.89:0,17,181	0/0:68,0:64:46.93:0,47,535	0/0:37,0:36:2.27:0,2,4	0/0:22,0:21:15.43:0,15,205	0/0:53,0:51:11.68:0,12,117	0/0:24,4:28:14.84:0,15,145	0/1:46,5:48:99:162,0,702	0/1:21,4:25:70.88:71,0,264	0/1:9,1:10:32.58:33,0,158
chr10	20553313	.	T	TTTGG	12777.41	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-10.528;DP=686;FS=7.586;HRun=0;HaplotypeScore=133.5208;InbreedingCoeff=0.9488;MQ=69.52;MQ0=6;MQRankSum=2.200;QD=28.46;ReadPosRankSum=-1.556;VQSLOD=3.6535;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:40:72.08:0,72,670	0/0:1,0:5:9.01:0,9,84	0/0:29,0:21:15.01:0,15,156	0/0:31,0:27:24.04:0,24,341	0/0:15,0:29:38.25:0,38,339	1/1:11,22:32:51.16:1167,51,0	1/1:7,13:20:12.51:287,13,0	0/0:14,0:19:12.01:0,12,109	1/1:5,10:15:21.07:500,21,0	1/1:11,10:26:3.70:766,4,0	1/1:9,8:18:26.98:537,27,0	1/1:9,14:22:36.12:856,36,0	1/1:7,17:24:48.16:1141,48,0	1/1:8,10:19:24.08:570,24,0	1/1:11,11:23:27.09:641,27,0	1/1:20,0:20:22.29:325,22,0	1/1:37,0:37:35.07:551,35,0	1/1:23,0:22:12.01:178,12,0	1/1:20,14:34:21.24:944,21,0	1/1:6,8:16:30.06:622,30,0	1/1:13,25:40:57.20:1356,57,0	1/1:8,11:20:31.82:717,32,0	1/1:12,9:21:24.55:571,25,0	1/1:13,21:35:26.18:1049,26,0	0/0:9,0:17:24.03:0,24,223	0/0:15,0:25:26.98:0,27,242	0/0:7,0:23:36.04:0,36,335	0/0:6,0:18:27.03:0,27,251
chr10	20553467	.	A	AT	7320.22	PASS	AB=1.000;AC=31;AF=0.554;AN=56;BaseQRankSum=-13.345;DP=600;FS=6.971;HRun=9;HaplotypeScore=59.8562;InbreedingCoeff=0.9561;MQ=67.78;MQ0=0;MQRankSum=1.602;QD=23.09;ReadPosRankSum=1.208;VQSLOD=5.7620;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:86.97:0,87,754	0/0:10,0:10:26.99:0,27,234	0/0:22,0:22:21.46:0,21,256	0/1:13,0:11:0.69:1,0,121	0/0:23,0:23:56.97:0,57,495	1/1:0,13:15:38.77:393,39,0	1/1:7,20:27:48.13:531,48,0	0/0:39,0:39:89.95:0,90,781	1/1:4,14:18:32.98:348,33,0	1/1:6,17:23:48.12:525,48,0	1/1:0,22:23:68.99:732,69,0	1/1:2,16:18:42.07:451,42,0	1/1:3,14:17:36.10:398,36,0	1/1:2,15:17:19.07:439,19,0	1/1:7,24:31:39.98:671,40,0	0/0:19,1:21:22.81:0,23,411	0/0:26,0:26:71.97:0,72,625	0/0:27,0:27:62.93:0,63,539	1/1:4,19:23:57.11:618,57,0	1/1:6,12:18:16.02:392,16,0	1/1:3,18:21:45.12:498,45,0	1/1:5,11:16:30:315,30,0	1/1:1,12:13:33.09:365,33,0	1/1:4,19:24:60:645,60,0	0/0:17,1:18:17.94:0,18,360	0/0:27,0:27:65.94:0,66,569	0/0:23,0:23:65.99:0,66,573	0/0:14,0:14:41.99:0,42,365
chr10	20555606	.	A	AT	1778.94	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=1.271;DP=561;FS=1.077;HRun=7;HaplotypeScore=84.1725;InbreedingCoeff=0.9466;MQ=70.15;MQ0=1;MQRankSum=0.517;QD=26.16;ReadPosRankSum=0.036;VQSLOD=4.0367;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:56:99:0,141,1320	0/0:8,0:8:17.90:0,18,150	0/0:24,0:16:26.68:0,27,172	0/0:11,0:6:4.45:0,4,29	0/0:22,0:22:63:0,63,587	0/0:21,0:21:57.36:0,57,532	0/0:20,0:20:56.49:0,56,507	0/0:26,0:26:60.88:0,61,489	0/0:16,0:18:45.47:0,45,374	0/0:15,0:15:38.22:0,38,333	0/0:20,0:20:55.86:0,56,492	0/0:10,0:10:25.80:0,26,189	0/0:19,0:20:51.84:0,52,417	0/0:16,0:16:43.75:0,44,360	0/0:15,0:15:41.14:0,41,396	0/0:19,0:19:54.06:0,54,512	0/0:36,0:36:95.75:0,96,883	0/0:35,0:35:95.96:0,96,881	0/0:17,0:17:43.27:0,43,341	0/0:9,0:9:23.55:0,24,193	0/0:13,0:13:23.87:0,24,188	0/0:13,0:13:32.64:0,33,298	0/0:8,0:8:23.39:0,23,195	0/0:19,0:19:41.52:0,42,370	0/0:22,0:22:62.89:0,63,591	1/1:3,21:24:40.35:694,40,0	1/1:0,22:22:57.17:673,57,0	1/1:4,17:22:48.13:554,48,0
chr10	20556129	.	CT	C	703.51	PASS	AB=1.000;AC=8;AF=0.143;AN=56;BaseQRankSum=7.137;DP=562;FS=0.000;HRun=1;HaplotypeScore=79.8702;InbreedingCoeff=0.7125;MQ=63.17;MQ0=3;MQRankSum=-0.789;QD=12.34;ReadPosRankSum=-1.626;VQSLOD=1.5243;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:95.11:0,95,1421	0/0:2,0:2:6.02:0,6,94	0/0:24,1:17:45.07:0,45,571	0/0:37,0:28:56.80:0,57,1001	0/0:9,0:9:23.57:0,24,332	0/0:21,0:21:57.56:0,58,847	0/0:44,0:44:99:0,124,1807	0/0:29,0:28:78.23:0,78,1140	0/0:27,0:27:81.24:0,81,1204	0/0:15,0:14:37.46:0,37,533	0/1:12,0:12:0.87:1,0,420	0/0:19,0:19:54.17:0,54,818	0/0:19,0:19:47.19:0,47,678	0/0:19,0:19:49.36:0,49,712	0/0:24,0:24:71.27:0,71,1079	1/1:1,5:4:9.03:126,9,0	1/1:0,16:16:21.07:293,21,0	1/1:1,17:18:17.35:364,17,0	0/0:8,0:8:24.08:0,24,374	0/0:12,0:12:32.11:0,32,363	0/0:69,0:68:99:0,198,2965	0/0:8,0:8:23.26:0,23,309	0/1:5,0:4:21.46:61,0,21	0/0:36,0:35:99:0,99,1441	0/0:10,0:10:30:0,30,392	0/0:16,0:16:44.54:0,45,611	0/0:10,0:10:30.10:0,30,468	0/0:11,0:11:33.11:0,33,494
chr10	20556166	.	C	CA	3191.78	PASS	AB=0.800;AC=23;AF=0.411;AN=56;BaseQRankSum=15.444;DP=688;FS=219.587;HRun=2;HaplotypeScore=114.5144;InbreedingCoeff=-0.7358;MQ=54.56;MQ0=17;MQRankSum=-13.110;QD=6.50;ReadPosRankSum=1.376;VQSLOD=-0.6168;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:28,6:33:99:128,0,742	0/1:3,4:7:19.13:181,0,19	0/1:38,5:17:34.62:35,0,351	0/0:42,6:19:1.68:0,2,479	0/1:14,3:17:99:125,0,362	0/1:18,7:25:99:230,0,514	0/1:31,14:45:99:327,0,930	0/0:29,0:27:78.23:0,78,946	0/1:22,2:22:27.48:27,0,574	0/1:6,10:16:99:339,0,144	0/1:10,8:18:99:212,0,288	0/1:13,4:16:88.48:88,0,285	0/1:21,3:23:62.34:62,0,619	0/1:21,2:23:17.90:18,0,601	0/1:20,2:22:21.41:21,0,642	0/1:11,3:13:52.92:53,0,301	0/1:14,2:15:9.91:10,0,338	0/1:15,3:17:99:99,0,212	0/1:24,1:22:58.06:58,0,614	0/1:9,11:20:99:409,0,216	0/0:74,2:76:99:0,124,2363	0/1:6,3:9:96.08:96,0,131	0/1:5,8:13:78.24:308,0,78	0/0:31,0:30:81.17:0,81,970	0/1:10,4:14:99:130,0,271	0/1:20,9:29:99:266,0,571	0/1:13,5:18:99:121,0,384	0/0:10,0:11:0.48:0,0,316
chr10	20556341	.	ACCCCCCACCACCTCCAACCCCAACACC	A	246.21	PASS	AB=1.000;AC=7;AF=0.318;AN=22;BaseQRankSum=2.750;DP=705;FS=0.000;HRun=0;HaplotypeScore=19.0804;InbreedingCoeff=0.0939;MQ=10.43;MQ0=474;MQRankSum=0.650;QD=1.47;ReadPosRankSum=-1.150;VQSLOD=0.9107;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:3:3.01:0,3,40	0/1:8,0:3:0:0,0,0	./.	./.	0/0:28,0:7:3.01:0,3,45	./.	./.	0/1:32,0:5:9.95:10,0,114	./.	0/0:26,0:8:21.07:0,21,468	./.	./.	./.	1/1:33,0:2:3.01:84,3,0	./.	./.	./.	./.	0/0:9,0:1:3.01:0,3,82	./.	1/1:67,6:7:3.01:84,3,0	./.	0/0:24,0:12:3.01:0,3,69	./.	./.	0/1:22,0:3:80.65:156,0,81	0/0:12,0:4:2.78:0,3,28	./.
chr10	20556368	.	C	CATCAACATCCCAA	3666.82	PASS	AB=0.947;AC=23;AF=0.639;AN=36;BaseQRankSum=4.408;DP=623;FS=0.000;HRun=0;HaplotypeScore=42.8984;InbreedingCoeff=0.2880;MQ=14.19;MQ0=379;MQRankSum=0.000;QD=10.88;ReadPosRankSum=-0.974;VQSLOD=0.8913;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:43,0:6:5.85:176,6,0	1/1:2,0:2:0.47:1,0,0	./.	./.	0/0:22,0:5:3.01:0,3,123	./.	1/1:28,0:4:2.97:20,3,0	0/0:32,0:4:3.01:0,3,46	1/1:17,2:5:12.04:753,12,0	0/0:20,0:7:14.78:0,15,376	./.	1/1:23,1:4:3.01:198,3,0	./.	1/1:21,2:3:8.24:337,8,0	./.	0/1:8,0:2:38.19:38,0,111	1/1:23,0:5:9:385,9,0	1/1:20,0:7:6.02:148,6,0	0/1:16,1:5:55.79:377,0,56	./.	1/1:67,0:14:20.90:370,21,0	./.	0/0:23,0:12:3.01:0,3,123	1/1:35,0:8:16.29:497,16,0	./.	0/1:23,1:5:99:367,0,206	0/0:12,0:5:3:0,3,123	./.
chr10	20556431	.	ACACC	A	678.59	PASS	AB=0.960;AC=19;AF=0.339;AN=56;BaseQRankSum=4.555;DP=440;FS=20.917;HRun=0;HaplotypeScore=117.7651;InbreedingCoeff=-0.3028;MQ=38.89;MQ0=59;MQRankSum=-1.008;QD=2.41;ReadPosRankSum=-0.929;VQSLOD=0.7818;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:19,0:15:29.12:29,0,112	1/1:5,0:5:3.01:33,3,0	0/0:21,0:7:8.01:0,8,219	0/1:28,0:5:9.75:10,0,118	0/0:11,0:8:2.60:0,3,10	0/1:8,0:8:73.71:74,0,118	0/0:15,0:11:26.74:0,27,290	0/0:14,0:9:15.03:0,15,304	0/1:16,1:14:64.92:65,0,139	0/1:9,3:11:99:119,0,500	1/1:15,0:12:5.21:22,5,0	0/1:21,0:19:30.08:30,0,51	0/1:18,0:15:16.37:16,0,104	0/0:9,0:6:12.04:0,12,158	0/1:23,0:20:47.19:47,0,113	0/1:16,0:14:23.68:114,0,24	0/1:23,0:20:29.08:29,0,336	0/0:22,0:16:12.33:0,12,280	0/0:10,0:9:24.08:0,24,464	0/1:25,0:25:20.51:21,0,80	0/0:23,0:15:6.02:0,6,121	0/1:5,2:7:99:126,0,159	0/1:20,0:19:29.07:29,0,78	0/0:23,0:19:22.19:0,22,318	0/1:6,1:5:44.46:44,0,173	0/0:6,0:3:6.02:0,6,174	0/1:18,0:13:28.10:28,0,227	0/0:4,0:4:7.67:0,8,29
chr10	20556435	.	C	CATCAACATCTCAA	25763.08	PASS	AB=0.806;AC=32;AF=0.593;AN=54;BaseQRankSum=-1.698;DP=616;FS=144.993;HRun=0;HaplotypeScore=184.6037;InbreedingCoeff=-0.5537;MQ=39.96;MQ0=57;MQRankSum=-5.411;QD=44.27;ReadPosRankSum=0.315;VQSLOD=1.6770;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:10,10:20:99:549,0,105	1/1:5,1:9:9.03:390,9,0	0/0:30,0:10:4.96:0,5,281	0/1:34,0:7:82.30:122,0,82	1/1:13,4:14:20.99:676,21,0	0/1:14,3:19:6.35:1775,0,6	0/1:18,0:14:99:813,0,110	0/1:18,0:14:99:214,0,261	0/1:17,5:20:46.89:2488,0,47	0/1:21,0:19:99:1706,0,133	1/1:13,9:21:23.92:733,24,0	1/1:10,12:21:24.04:1095,24,0	0/1:18,8:25:85.21:1714,0,85	1/1:14,0:14:30.10:1269,30,0	0/1:11,15:29:83.81:1686,0,84	1/1:9,9:20:17.46:1065,17,0	0/1:10,12:25:99:740,0,294	0/1:11,10:21:99:792,0,221	0/1:13,0:11:99:310,0,228	0/1:14,20:38:60.69:1454,0,61	0/1:20,0:12:16.66:17,0,115	0/1:14,0:14:99:1450,0,160	0/1:7,11:22:62.16:892,0,62	0/1:7,11:20:35.83:36,0,177	0/1:13,1:12:99:758,0,186	0/1:21,0:17:99:1511,0,139	0/1:13,4:19:43.67:1510,0,44	./.
chr10	20556871	.	G	GCACACACA	7293.51	PASS	AB=0.601;AC=39;AF=0.722;AN=54;BaseQRankSum=-6.877;DP=656;FS=3.542;HRun=0;HaplotypeScore=185.2935;InbreedingCoeff=0.5535;MQ=51.61;MQ0=14;MQRankSum=0.599;QD=14.70;ReadPosRankSum=-1.428;VQSLOD=3.7022;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:3,0:37:2.29:6,2,0	1/1:6,4:13:12.04:289,12,0	0/0:19,0:6:1.82:0,2,5	./.	1/1:18,3:22:11.76:113,12,0	1/1:3,10:18:9.03:371,9,0	1/1:22,0:22:9.02:122,9,0	1/1:28,0:27:32.94:371,33,0	1/1:9,11:25:21.07:736,21,0	1/1:12,17:34:71.48:1418,71,0	0/0:6,12:19:0:0,0,0	1/1:8,15:27:16.61:572,17,0	1/1:13,4:29:11.61:415,12,0	1/1:12,7:24:3.01:64,3,0	1/1:7,8:18:5.92:246,6,0	0/0:6,0:29:45.20:0,45,888	0/0:11,0:35:19.94:0,20,324	0/0:6,0:19:17.97:0,18,224	0/0:6,0:21:17.80:0,18,276	0/1:7,7:17:0.04:0,0,1	1/1:16,0:14:11.81:261,12,0	1/1:10,7:21:15.04:293,15,0	1/1:7,9:15:3.01:124,3,0	0/1:14,15:33:10.23:118,0,10	0/1:5,0:26:11.05:224,0,11	1/1:12,0:33:45.02:1173,45,0	1/1:4,1:15:9.03:228,9,0	1/1:3,0:13:6.02:149,6,0
chr10	20560335	.	AGCCTG	A	398.04	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.418;DP=797;FS=2.797;HRun=0;HaplotypeScore=147.4504;InbreedingCoeff=0.9988;MQ=79.14;MQ0=0;MQRankSum=-1.020;QD=26.54;ReadPosRankSum=0.824;VQSLOD=3.7176;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:64,0:63:99:0,178,5348	0/0:16,0:16:45.15:0,45,1380	0/0:20,0:20:54.18:0,54,1432	0/0:22,0:22:48.16:0,48,1196	0/0:22,0:22:63.22:0,63,1907	0/0:30,0:30:87.28:0,87,2538	0/0:32,0:32:87.30:0,87,2638	0/0:24,0:24:69.23:0,69,2018	0/0:29,0:29:81.26:0,81,2412	0/0:25,0:25:69.24:0,69,2101	0/0:15,0:15:45.15:0,45,1340	0/0:35,0:35:99:0,105,3144	0/0:32,0:32:96.33:0,96,2913	0/0:34,0:34:93.32:0,93,2793	0/0:35,0:35:93.31:0,93,2717	0/0:29,0:29:84.27:0,84,2512	0/0:34,0:34:93.29:0,93,2789	0/0:20,0:20:54.19:0,54,1614	0/0:20,0:19:51.17:0,51,1447	1/1:0,15:15:27.05:492,27,0	0/0:78,0:78:99:0,226,6740	0/0:24,0:24:63.22:0,63,1869	0/0:19,0:19:57.20:0,57,1713	0/0:40,0:40:99:0,114,3453	0/0:13,0:13:39.12:0,39,1128	0/0:26,0:26:78.26:0,78,2239	0/0:31,0:31:93.32:0,93,2853	0/0:13,0:13:39.12:0,39,1132
chr10	20561092	.	A	AT	14027.97	PASS	AB=0.567;AC=50;AF=0.893;AN=56;BaseQRankSum=-5.482;DP=523;FS=1.898;HRun=8;HaplotypeScore=47.2026;InbreedingCoeff=0.6252;MQ=78.89;MQ0=0;MQRankSum=-6.077;QD=28.28;ReadPosRankSum=2.108;VQSLOD=5.2101;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,31:35:62.80:974,63,0	1/1:1,6:7:18.05:208,18,0	0/0:11,0:11:18.01:0,18,165	0/0:16,0:15:24.73:0,25,242	1/1:3,18:21:51.15:588,51,0	1/1:3,19:23:60.15:679,60,0	1/1:2,12:14:30.09:346,30,0	1/1:3,27:31:84.06:937,84,0	1/1:0,14:14:36.11:415,36,0	1/1:2,17:19:51.15:589,51,0	1/1:1,10:11:2.58:269,3,0	1/1:1,28:29:66.05:747,66,0	1/1:0,17:17:48.14:554,48,0	1/1:2,20:22:57.17:658,57,0	1/1:2,19:21:54.12:608,54,0	1/1:3,15:18:41.96:465,42,0	1/1:1,29:30:78.23:900,78,0	1/1:1,17:18:45.13:519,45,0	1/1:6,20:26:63.17:716,63,0	1/1:2,9:11:27.08:311,27,0	1/1:1,19:20:42.12:485,42,0	1/1:0,10:10:30.09:346,30,0	0/1:2,5:7:9.48:127,0,9	1/1:2,22:24:60.18:692,60,0	0/1:2,9:11:3.40:218,0,3	1/1:2,15:17:42.08:460,42,0	1/1:2,30:33:90.26:1028,90,0	1/1:1,5:7:17.89:188,18,0
chr10	20561195	.	A	AAAAAAAG	20987.45	PASS	AB=0.692;AC=48;AF=0.857;AN=56;BaseQRankSum=-3.073;DP=534;FS=1.585;HRun=0;HaplotypeScore=119.5019;InbreedingCoeff=0.3396;MQ=57.46;MQ0=3;MQRankSum=-3.623;QD=44.28;ReadPosRankSum=1.144;VQSLOD=4.5527;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:25,7:33:74.34:1606,74,0	1/1:2,0:3:5.93:54,6,0	0/0:35,0:15:26.25:0,26,261	0/0:25,0:9:8.88:0,9,62	1/1:4,0:31:57.51:1095,58,0	1/1:17,4:21:38.19:1148,38,0	1/1:4,13:17:22.60:704,23,0	1/1:5,24:34:85.05:1525,85,0	1/1:11,5:17:19.71:946,20,0	1/1:0,0:11:29.11:561,29,0	1/1:10,1:18:41.05:789,41,0	0/1:5,0:12:63.15:167,0,63	1/1:15,2:17:34.14:585,34,0	0/1:16,2:17:44.22:861,0,44	1/1:14,3:20:52.92:988,53,0	1/1:8,2:11:26.51:562,27,0	1/1:17,7:24:29.36:1133,29,0	1/1:13,3:17:18.61:939,19,0	1/1:22,0:22:50.70:820,51,0	1/1:3,9:14:11.94:390,12,0	1/1:1,5:8:9.03:293,9,0	0/1:6,0:11:49.44:237,0,49	0/1:3,0:12:10.81:256,0,11	1/1:1,1:8:3.01:91,3,0	1/1:15,12:28:72.83:2072,73,0	1/1:13,5:19:50.97:1237,51,0	1/1:19,3:22:54.85:979,55,0	1/1:2,11:17:27.02:949,27,0
chr10	20561790	.	A	AGGAT	1539.98	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-5.728;DP=781;FS=21.053;HRun=0;HaplotypeScore=125.6693;InbreedingCoeff=0.9876;MQ=76.23;MQ0=0;MQRankSum=-2.867;QD=40.53;ReadPosRankSum=0.825;VQSLOD=2.3341;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:62,0:62:99:0,144,2382	0/0:10,0:10:18.05:0,18,277	0/0:24,0:24:39.12:0,39,623	0/0:30,0:30:53:0,53,869	0/0:21,0:21:42.10:0,42,697	0/0:20,0:20:36.12:0,36,604	0/0:26,0:26:57.19:0,57,957	0/0:29,0:29:54.18:0,54,868	0/0:23,0:23:51.16:0,51,826	0/0:35,0:35:69.24:0,69,1143	0/0:14,0:14:24.08:0,24,397	0/0:35,0:35:96.33:0,96,1606	0/0:36,0:36:72.25:0,72,1208	0/0:39,0:39:90.29:0,90,1476	1/1:9,26:38:66.23:1635,66,0	0/0:42,0:42:99:0,105,1732	0/0:36,0:36:90.27:0,90,1458	0/0:30,0:30:69.18:0,69,1102	0/0:22,0:22:42.13:0,42,676	0/0:14,0:14:29.99:0,30,479	0/0:47,0:47:99:0,114,1908	0/0:16,0:16:33.11:0,33,554	0/0:20,0:20:39.13:0,39,655	0/0:32,0:31:72.23:0,72,1178	0/0:13,0:13:33.11:0,33,554	0/0:22,0:22:51.17:0,51,851	0/0:32,0:32:69.22:0,69,1129	0/0:13,0:13:26.37:0,26,440
chr10	20562153	.	GGTGTGC	G	12234.70	PASS	AB=0.667;AC=33;AF=0.589;AN=56;BaseQRankSum=7.590;DP=628;FS=1.185;HRun=0;HaplotypeScore=272.5805;InbreedingCoeff=0.9069;MQ=69.53;MQ0=2;MQRankSum=-11.010;QD=33.89;ReadPosRankSum=4.444;VQSLOD=4.2739;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:14,16:31:34.69:887,35,0	0/0:5,0:5:9.03:0,9,190	0/0:48,0:41:99:0,103,2512	0/0:33,0:31:63.07:0,63,1531	0/0:19,0:19:29.93:0,30,753	1/1:5,16:21:51.16:1033,51,0	1/1:2,11:13:30.03:584,30,0	1/1:12,19:31:20:1239,20,0	1/1:6,13:19:39.11:787,39,0	0/0:25,0:25:59.01:0,59,1464	0/0:23,0:23:47.49:0,47,1177	1/1:8,13:21:48.03:943,48,0	1/1:3,22:25:48.16:1057,48,0	1/1:9,11:20:36.11:751,36,0	0/0:24,0:23:57.18:0,57,1766	0/0:21,0:21:47.84:0,48,1168	0/0:21,0:21:47.03:0,47,1146	0/0:16,0:15:33.11:0,33,903	0/0:29,0:29:54.18:0,54,1183	1/1:8,9:17:27.01:471,27,0	1/1:15,15:28:6.91:106,7,0	1/1:7,8:15:27.01:546,27,0	1/1:6,10:16:17.88:270,18,0	1/1:8,6:14:4.96:191,5,0	1/1:8,14:22:30.10:660,30,0	0/1:18,18:36:3.77:1442,0,4	1/1:5,10:15:30.10:653,30,0	1/1:7,8:15:30.06:615,30,0
chr10	20562157	.	TGC	T	1332.78	PASS	AB=0.994;AC=18;AF=0.321;AN=56;BaseQRankSum=14.255;DP=604;FS=2.529;HRun=0;HaplotypeScore=268.3148;InbreedingCoeff=-0.1310;MQ=68.18;MQ0=2;MQRankSum=-13.025;QD=4.27;ReadPosRankSum=9.190;VQSLOD=1.6018;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:28,1:29:69.24:103,0,69	0/0:5,0:5:9.03:0,9,143	0/0:48,0:40:99:0,114,1955	0/0:40,0:31:24.76:0,25,1047	0/0:18,0:18:30.05:0,30,572	0/1:21,0:21:59.44:108,0,59	0/1:14,0:14:1.40:60,0,1	0/1:29,0:29:99:154,0,103	0/1:17,0:18:18.52:75,0,19	0/0:24,0:24:65.02:0,65,1148	0/0:21,0:21:50.49:0,50,936	0/1:21,0:21:31.87:126,0,32	1/1:25,0:25:11.88:140,12,0	0/1:18,0:18:75.43:78,0,75	0/0:22,0:21:60.21:0,60,1131	0/0:21,0:21:53.86:0,54,938	0/0:22,0:22:53.06:0,53,894	0/0:15,0:14:39.05:0,39,675	0/0:27,0:27:72.12:0,72,1161	0/1:15,0:15:24.72:44,0,25	0/0:27,2:27:0.62:0,1,49	1/1:14,1:15:12.98:130,13,0	0/1:16,0:16:20.99:21,0,84	0/1:13,0:13:34.92:38,0,35	0/1:19,0:19:12.88:87,0,13	0/1:32,0:32:99:188,0,138	0/1:14,0:14:19.96:74,0,20	0/1:13,0:13:45.56:74,0,46
chr10	20562179	.	GGTGTGTGTGGGGGTGTGTGTGT	G	15461.31	PASS	AB=0.972;AC=35;AF=0.625;AN=56;BaseQRankSum=4.955;DP=642;FS=4.510;HRun=0;HaplotypeScore=401.5099;InbreedingCoeff=0.3107;MQ=45.94;MQ0=19;MQRankSum=-4.454;QD=32.97;ReadPosRankSum=4.268;VQSLOD=2.1995;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:27,1:28:10.34:322,0,10	0/0:3,0:3:2.97:0,3,20	0/0:57,0:27:38.97:0,39,1144	0/0:51,0:19:31.56:0,32,641	0/0:19,0:19:14.86:0,15,168	1/1:20,2:21:39.13:1099,39,0	1/1:18,0:18:23.61:790,24,0	1/1:23,16:39:26.72:1364,27,0	1/1:22,1:22:51.16:1428,51,0	0/1:19,0:19:99:253,0,239	0/0:19,0:19:29.86:0,30,341	1/1:19,1:19:28.91:768,29,0	1/1:22,4:26:44.79:1943,45,0	1/1:16,1:18:24.08:921,24,0	0/0:23,0:21:39.02:0,39,810	0/1:14,0:14:99:461,0,179	0/1:17,0:17:99:333,0,101	0/1:12,0:11:39.56:40,0,188	0/1:19,0:16:99:161,0,109	1/1:13,6:19:12.04:352,12,0	0/1:32,0:29:0.01:0,0,1	1/1:14,9:23:14.93:305,15,0	1/1:12,8:20:3.01:77,3,0	0/1:18,1:19:15.52:48,0,16	1/1:22,0:22:23.64:529,24,0	1/1:24,8:31:69.24:2531,69,0	1/1:14,1:15:26.70:932,27,0	0/1:8,2:10:26.82:804,0,27
chr10	20562188	.	G	GT	4990.12	PASS	AB=0.987;AC=38;AF=0.679;AN=56;BaseQRankSum=5.428;DP=571;FS=0.540;HRun=1;HaplotypeScore=243.1980;InbreedingCoeff=0.4048;MQ=38.52;MQ0=35;MQRankSum=-3.946;QD=13.13;ReadPosRankSum=4.547;VQSLOD=4.3274;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,14:25:25:215,25,0	0/0:2,0:2:2.97:0,3,20	0/0:61,0:14:39.03:0,39,474	0/0:62,0:17:18.01:0,18,323	0/1:15,0:15:11.29:11,0,28	1/1:8,10:17:35.83:392,36,0	1/1:2,11:11:22.65:281,23,0	1/1:20,3:22:37.08:535,37,0	1/1:8,13:20:32.04:468,32,0	0/1:15,0:15:18.27:85,0,18	0/0:16,0:15:5.04:0,5,96	1/1:5,9:14:29.56:270,30,0	1/1:12,6:19:42.87:430,43,0	1/1:8,7:15:28.91:292,29,0	0/0:17,0:15:37.65:0,38,225	0/1:11,1:12:21.36:21,0,80	0/1:11,0:10:2.02:18,0,2	0/1:11,0:9:19.04:19,0,64	0/1:19,0:12:14.99:20,0,15	1/1:10,7:16:12.04:147,12,0	0/0:12,21:28:1.68:0,2,5	1/1:13,8:21:10.21:125,10,0	1/1:11,7:18:2.71:43,3,0	1/1:7,10:17:7.88:77,8,0	1/1:10,11:21:19.17:187,19,0	1/1:16,13:27:55.69:762,56,0	1/1:6,7:13:27.08:365,27,0	1/1:8,1:8:18.04:226,18,0
chr10	20562192	.	GT	G	4287.62	PASS	AB=0.890;AC=49;AF=0.875;AN=56;BaseQRankSum=4.921;DP=580;FS=2.402;HRun=1;HaplotypeScore=252.5990;InbreedingCoeff=0.2974;MQ=35.86;MQ0=42;MQRankSum=-0.755;QD=8.80;ReadPosRankSum=4.595;VQSLOD=2.7021;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:23:17.29:114,17,0	1/1:1,2:3:1.25:3,1,0	0/0:61,0:12:30.09:0,30,376	0/1:60,2:13:12.03:12,0,262	1/1:1,12:13:9.03:102,9,0	1/1:20,0:19:36.62:246,37,0	1/1:15,0:13:17.68:204,18,0	1/1:22,0:20:28.37:270,28,0	1/1:23,0:22:37.04:334,37,0	1/1:4,9:13:26.17:291,26,0	1/1:9,5:14:13.35:120,13,0	1/1:19,0:18:3:109,3,0	1/1:21,0:21:39.60:347,40,0	1/1:16,0:16:25.27:192,25,0	1/1:5,2:13:19.98:107,20,0	1/1:3,7:11:20.33:171,20,0	1/1:5,8:12:23.99:227,24,0	0/1:4,3:5:32.05:83,0,32	1/1:13,6:12:6.30:141,6,0	1/1:17,0:16:11.88:89,12,0	0/0:32,0:27:1.55:0,2,5	1/1:21,0:21:8.78:71,9,0	1/1:19,0:18:2.67:26,3,0	1/1:16,1:17:3.13:21,3,0	0/1:25,0:25:2.45:82,0,2	1/1:29,0:27:63.97:561,64,0	1/1:15,0:15:25.94:236,26,0	1/1:10,0:8:2.65:126,3,0
chr10	20562194	.	GTGTGTGTGTGTGTGTGTGT	G	4660.03	PASS	AB=0.985;AC=24;AF=0.429;AN=56;BaseQRankSum=6.249;DP=610;FS=3.742;HRun=0;HaplotypeScore=351.3723;InbreedingCoeff=-0.2863;MQ=34.99;MQ0=50;MQRankSum=-2.691;QD=13.35;ReadPosRankSum=5.939;VQSLOD=2.3660;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:23:0.66:1,0,84	1/1:3,0:3:2.74:12,3,0	0/0:66,0:11:27.09:0,27,694	0/0:60,0:11:26.82:0,27,685	0/0:10,3:13:5.85:0,6,17	0/1:22,0:21:99:228,0,156	0/1:18,0:15:82.74:124,0,83	0/0:28,0:25:9.90:0,10,847	0/1:26,0:25:99:232,0,114	1/1:10,2:12:3.52:398,4,0	0/1:10,3:12:2.49:20,0,2	0/1:21,0:20:99:186,0,269	0/1:22,0:22:92.29:781,0,92	0/1:19,0:18:99:305,0,290	0/1:13,0:11:29.84:30,0,573	1/1:6,5:11:1.50:487,1,0	1/1:9,3:11:9.45:398,9,0	0/1:7,0:5:93.66:99,0,94	0/1:18,1:12:99:209,0,190	0/1:17,0:16:61.53:62,0,65	0/0:38,0:31:3.31:0,3,35	0/0:21,0:21:6.16:0,6,41	0/0:19,0:18:2.04:0,2,6	0/0:16,0:16:5.14:0,5,22	0/1:27,0:26:49.17:49,0,197	0/1:29,0:27:99:607,0,162	0/1:14,0:14:18.56:208,0,19	0/1:15,0:13:99:225,0,328
chr10	20562195	.	T	TG	1604.25	PASS	AB=1.000;AC=32;AF=0.571;AN=56;BaseQRankSum=4.156;DP=621;FS=0.000;HRun=1;HaplotypeScore=286.0039;InbreedingCoeff=0.3039;MQ=35.12;MQ0=51;MQRankSum=-0.904;QD=4.18;ReadPosRankSum=2.753;VQSLOD=0.0369;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:23:4.46:42,0,4	0/1:3,0:3:0:0,0,0	0/0:67,0:11:27.09:0,27,346	0/0:59,0:9:21.03:0,21,241	0/0:14,0:14:6.46:0,6,21	1/1:22,1:22:6.25:143,6,0	0/1:18,0:15:3.43:166,0,3	0/1:28,0:25:63.55:64,0,82	0/1:25,0:24:11.74:133,0,12	1/1:14,0:14:4.65:151,5,0	0/0:13,0:12:4.59:0,5,15	1/1:20,0:19:9.26:84,9,0	1/1:22,0:22:13.52:205,14,0	1/1:19,0:18:15.38:89,15,0	0/0:13,0:11:4.87:0,5,25	0/1:13,0:13:2.32:105,0,2	0/0:15,0:14:5.03:0,5,22	0/1:7,0:5:32.78:33,0,34	0/0:18,0:11:15.45:0,15,97	1/1:17,0:16:5.92:50,6,0	0/0:38,0:31:6.28:0,6,20	1/1:21,0:21:2.08:17,2,0	1/1:19,0:18:0.89:2,1,0	1/1:15,2:17:8.66:66,9,0	1/1:27,0:26:3.32:64,3,0	1/1:28,1:27:10.29:201,10,0	1/1:14,0:14:11.83:117,12,0	0/1:18,0:16:41.53:42,0,47
chr10	20562196	.	GT	G	1771.70	PASS	AB=0.876;AC=30;AF=0.536;AN=56;BaseQRankSum=9.509;DP=626;FS=0.000;HRun=1;HaplotypeScore=270.4123;InbreedingCoeff=-0.0080;MQ=35.11;MQ0=52;MQRankSum=-2.761;QD=4.33;ReadPosRankSum=8.914;VQSLOD=-0.7105;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:24,5:22:25.95:36,0,26	0/0:3,0:3:1.82:0,2,5	0/0:67,0:10:27.09:0,27,383	0/0:62,0:9:23.86:0,24,280	0/0:14,0:14:6.48:0,6,21	0/1:19,4:22:19.02:122,0,19	0/1:19,0:16:27.52:82,0,28	0/1:28,0:25:57:57,0,209	0/1:19,6:24:44.68:105,0,45	1/1:14,1:14:2.52:121,3,0	0/0:12,0:11:4.59:0,5,15	0/1:17,2:19:55.26:79,0,55	0/1:14,7:21:2.93:279,0,3	1/1:14,5:18:2.48:145,2,0	1/1:12,0:10:12.46:45,12,0	1/1:14,0:14:4.72:86,5,0	0/1:15,0:14:1.36:16,0,1	0/1:7,0:5:27.78:28,0,49	0/0:18,0:11:2.44:0,2,96	1/1:14,3:16:7.36:59,7,0	0/0:35,6:34:7.38:0,7,23	0/1:16,4:21:3.80:14,0,4	1/1:16,2:17:0.89:2,1,0	1/1:13,3:17:4.46:73,4,0	0/1:19,9:27:26.92:52,0,27	1/1:24,5:27:15.63:261,16,0	1/1:10,4:14:15.44:205,15,0	0/1:14,4:16:67.09:67,0,145
chr10	20562197	.	T	TG	1383.17	PASS	AB=0.952;AC=21;AF=0.375;AN=56;BaseQRankSum=7.137;DP=616;FS=6.421;HRun=1;HaplotypeScore=265.8733;InbreedingCoeff=-0.3243;MQ=35.40;MQ0=53;MQRankSum=-1.938;QD=3.74;ReadPosRankSum=7.035;VQSLOD=0.0341;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:22:2.26:36,0,2	0/0:3,0:3:1.82:0,2,5	0/0:69,0:10:27.09:0,27,346	0/0:62,0:9:24.02:0,24,266	0/0:13,0:13:8.73:0,9,65	0/1:18,2:19:27.30:103,0,27	0/1:17,2:16:70.60:80,0,71	0/1:28,0:25:21.09:21,0,245	0/1:23,2:24:47.13:80,0,47	0/1:15,0:14:76.92:142,0,77	0/0:11,1:11:5.96:0,6,42	0/1:16,4:19:30.98:66,0,31	0/1:19,2:21:19.75:219,0,20	0/1:16,1:16:7:92,0,7	0/0:12,0:10:9.08:0,9,25	0/1:14,0:14:27.69:131,0,28	0/1:15,0:14:30.15:30,0,48	0/1:7,0:5:25.58:26,0,66	0/0:18,0:11:11.03:0,11,130	1/1:17,0:16:5.75:45,6,0	0/0:40,0:33:7.42:0,7,21	0/1:18,0:18:16.32:25,0,16	0/0:17,0:16:2.60:0,3,10	1/1:16,0:16:5.06:37,5,0	0/1:23,4:26:15.09:60,0,15	0/1:28,0:26:74.53:144,0,75	0/1:12,2:14:7.04:181,0,7	0/1:20,0:18:21.80:22,0,170
chr10	20562198	.	GTGT	G	4195.35	PASS	AB=0.847;AC=27;AF=0.482;AN=56;BaseQRankSum=0.504;DP=622;FS=1.030;HRun=0;HaplotypeScore=259.2291;InbreedingCoeff=-0.2742;MQ=35.48;MQ0=55;MQRankSum=1.500;QD=9.87;ReadPosRankSum=0.786;VQSLOD=2.9964;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:21,8:22:21.89:144,0,22	1/1:2,0:3:2.50:9,2,0	0/0:71,0:10:27.09:0,27,482	0/0:64,0:9:24.05:0,24,369	0/0:13,0:13:8.77:0,9,65	0/1:17,4:20:42.09:282,0,42	0/1:12,7:16:43.86:305,0,44	0/1:28,0:25:99:206,0,343	0/1:17,8:24:74.30:477,0,74	0/1:14,0:14:57.09:57,0,65	0/0:12,0:11:5.91:0,6,48	1/1:17,3:19:4.41:309,4,0	1/1:17,4:21:4.29:400,4,0	0/1:13,4:16:40.97:254,0,41	0/0:14,0:12:14.30:0,14,99	1/1:12,1:14:0.89:143,1,0	0/1:13,0:14:16.33:112,0,16	0/0:5,0:4:1.30:0,1,88	0/1:18,0:11:23.42:23,0,134	0/1:12,5:16:22.42:38,0,22	1/1:33,5:33:9.31:155,9,0	0/1:14,4:18:62.32:63,0,62	0/0:15,2:16:3.01:0,3,37	1/1:15,1:16:1.89:48,2,0	0/1:20,7:26:8.40:309,0,8	0/1:21,7:26:45.19:466,0,45	0/1:10,4:14:34.47:201,0,34	0/1:20,0:18:99:192,0,244
chr10	20562200	.	GT	G	2971.88	PASS	AB=0.918;AC=23;AF=0.411;AN=56;BaseQRankSum=-1.135;DP=625;FS=4.452;HRun=1;HaplotypeScore=250.9854;InbreedingCoeff=-0.4396;MQ=35.73;MQ0=56;MQRankSum=-0.070;QD=7.06;ReadPosRankSum=-0.725;VQSLOD=0.3870;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:26,2:21:34.99:103,0,35	1/1:3,0:3:2.50:9,2,0	0/0:73,0:10:27.06:0,27,365	0/0:66,0:9:23.80:0,24,289	0/0:13,0:13:6.46:0,6,48	0/1:17,3:19:45.85:225,0,46	0/1:13,5:15:47.90:232,0,48	0/1:25,2:23:99:175,0,356	0/1:23,3:25:94.15:396,0,94	0/1:15,0:14:19.46:19,0,142	0/0:12,0:11:5.83:0,6,55	0/1:15,4:18:27.34:240,0,27	0/1:19,2:21:41.97:264,0,42	0/1:13,4:16:72.02:196,0,72	0/0:17,0:15:29.39:0,29,219	0/1:14,0:14:21.45:63,0,21	0/1:14,0:13:40.95:60,0,41	0/0:6,0:4:2.21:0,2,76	0/1:19,0:12:4.41:4,0,139	0/1:17,0:16:24.48:24,0,30	1/1:32,10:35:14.84:203,15,0	0/1:18,0:18:43.64:44,0,64	0/0:16,1:16:3.01:0,3,38	0/1:15,1:16:0.44:44,0,0	0/1:23,4:26:23.04:247,0,23	0/1:26,0:24:99:273,0,132	0/1:14,1:15:89.83:140,0,90	0/1:12,7:17:99:165,0,233
chr10	20562201	.	T	TATG	5243.91	PASS	AB=0.939;AC=23;AF=0.411;AN=56;BaseQRankSum=-4.662;DP=638;FS=5.198;HRun=0;HaplotypeScore=255.8178;InbreedingCoeff=-0.4709;MQ=35.67;MQ0=57;MQRankSum=0.935;QD=12.61;ReadPosRankSum=-2.631;VQSLOD=3.5159;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:21:45.39:163,0,45	1/1:3,0:3:3:28,3,0	0/0:75,0:9:24.08:0,24,428	0/0:69,0:10:17.45:0,17,311	0/0:13,0:13:5.60:0,6,35	0/1:18,2:19:83.87:404,0,84	0/1:16,2:15:53.49:415,0,53	0/1:28,0:23:99:383,0,262	0/1:24,2:25:99:557,0,152	0/1:14,0:14:99:145,0,117	0/0:12,0:11:4.74:0,5,29	0/1:18,4:21:52.99:368,0,53	0/1:18,3:21:99:386,0,217	0/1:15,2:16:99:291,0,156	0/0:17,0:15:30.05:0,30,389	0/1:14,0:14:6.73:171,0,7	0/1:14,0:13:32.57:123,0,33	0/1:6,0:4:42.52:43,0,69	0/0:18,0:11:4:0,4,139	0/1:18,0:17:40.80:60,0,41	1/1:43,1:37:15.23:298,15,0	0/1:18,0:18:76.97:77,0,81	0/0:17,0:16:3.01:0,3,48	0/1:15,1:16:9.29:73,0,9	0/1:22,5:26:20.58:426,0,21	0/1:26,0:24:99:300,0,270	0/1:14,2:16:99:273,0,126	0/1:19,0:17:99:261,0,371
chr10	20562203	.	T	TATG	1335.65	PASS	AB=0.980;AC=23;AF=0.411;AN=56;BaseQRankSum=-0.649;DP=661;FS=4.278;HRun=0;HaplotypeScore=275.5648;InbreedingCoeff=-0.5387;MQ=35.86;MQ0=59;MQRankSum=-0.418;QD=2.99;ReadPosRankSum=-0.642;VQSLOD=1.6520;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:22:19.46:19,0,127	1/1:2,1:3:3.01:54,3,0	0/0:80,0:9:24.08:0,24,383	0/0:75,0:11:24.01:0,24,348	0/0:13,0:13:3.77:0,4,25	0/1:21,0:20:86.54:93,0,87	0/1:19,0:16:33.55:34,0,46	0/1:29,0:24:21.45:21,0,441	0/1:27,0:26:61.71:62,0,235	0/1:15,1:15:58.76:287,0,59	0/0:12,0:12:3.79:0,4,22	0/1:23,0:22:25.22:25,0,165	0/1:21,0:21:34.68:35,0,202	0/1:17,0:16:22.17:22,0,187	0/0:17,0:15:33.11:0,33,515	0/1:13,1:14:2.82:258,0,3	0/1:12,2:13:8.05:245,0,8	0/1:6,1:5:37.44:129,0,37	0/1:17,0:11:39.65:40,0,125	0/1:18,0:17:5.30:5,0,55	0/1:45,0:38:24.73:25,0,132	0/1:18,0:18:0.01:0,0,71	0/0:16,0:15:3.01:0,3,43	0/1:19,0:19:15.31:15,0,49	0/1:28,0:27:43.12:51,0,43	0/1:27,0:26:14.65:15,0,346	0/1:15,0:15:39.36:39,0,128	0/1:19,0:17:12.64:13,0,322
chr10	20562208	.	GTGTGTGGT	G	2347.76	PASS	AB=0.967;AC=19;AF=0.339;AN=56;BaseQRankSum=10.669;DP=658;FS=18.277;HRun=0;HaplotypeScore=279.9896;InbreedingCoeff=-0.2850;MQ=37.36;MQ0=62;MQRankSum=-4.154;QD=7.67;ReadPosRankSum=4.085;VQSLOD=0.9085;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:26:37.48:37,0,414	0/0:1,1:2:2.90:0,3,16	0/0:78,0:8:17.86:0,18,378	0/0:78,0:13:26.83:0,27,554	0/1:7,3:10:0:0,0,0	0/1:19,0:18:41.07:41,0,489	0/1:19,0:15:17.02:17,0,324	0/0:35,0:30:12.23:0,12,907	0/1:29,0:28:19.39:19,0,774	1/1:11,1:11:4.86:160,5,0	1/1:11,1:11:0.45:1,0,0	0/1:24,0:23:99:115,0,560	0/1:20,0:20:99:451,0,414	0/1:18,0:17:99:238,0,421	0/0:16,0:16:35.77:0,36,412	0/1:14,1:14:54.05:264,0,54	0/1:10,1:11:19.97:262,0,20	0/1:6,0:5:37.44:114,0,37	0/1:16,1:10:99:115,0,155	0/0:18,0:17:0.83:0,1,184	0/0:45,0:39:39.03:0,39,640	0/0:18,0:18:6.47:0,6,70	0/0:18,0:17:12.04:0,12,187	0/0:15,0:15:5.74:0,6,261	0/0:28,0:27:19.03:0,19,499	0/1:25,0:23:99:372,0,372	0/1:16,0:16:99:140,0,306	0/1:19,0:17:99:151,0,466
chr10	20562214	.	GGT	G	595.56	PASS	AB=0.946;AC=19;AF=0.339;AN=56;BaseQRankSum=10.377;DP=706;FS=31.367;HRun=0;HaplotypeScore=267.2252;InbreedingCoeff=-0.1705;MQ=39.06;MQ0=56;MQRankSum=-4.160;QD=2.00;ReadPosRankSum=1.597;VQSLOD=0.8643;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:32,2:28:44.12:44,0,443	1/1:2,0:2:1.55:4,2,0	0/0:79,0:9:16.16:0,16,217	0/0:81,1:18:30.27:0,30,364	0/0:10,0:10:0:0,0,0	0/1:15,3:18:2.36:2,0,354	0/1:20,0:16:12.84:13,0,249	0/0:46,0:41:78.16:0,78,1074	0/0:29,3:32:68.50:0,69,871	0/1:13,0:12:11.81:33,0,12	0/1:12,0:11:0.01:0,0,0	0/1:21,1:22:51.77:52,0,485	0/1:16,5:21:99:150,0,287	0/1:16,3:18:94.19:94,0,365	0/0:17,0:17:41.47:0,41,499	0/1:17,0:16:22.72:63,0,23	1/1:14,0:13:0.15:67,0,0	0/1:4,0:4:1.39:1,0,3	0/1:19,0:15:32.03:32,0,95	0/0:17,2:18:21.03:0,21,248	0/0:47,3:43:50.85:0,51,781	0/0:19,3:22:17.95:0,18,252	0/0:19,1:19:18.06:0,18,269	0/1:17,0:19:17.03:17,0,208	0/0:27,4:30:44.27:0,44,595	0/1:24,4:26:99:117,0,451	0/1:15,1:16:9.04:9,0,257	0/1:18,1:17:41.67:42,0,271
chr10	20562217	.	GTGTA	G	905.95	PASS	AB=0.900;AC=15;AF=0.268;AN=56;BaseQRankSum=5.596;DP=700;FS=24.961;HRun=0;HaplotypeScore=267.4518;InbreedingCoeff=0.4056;MQ=39.61;MQ0=49;MQRankSum=-5.297;QD=5.33;ReadPosRankSum=-4.003;VQSLOD=1.0181;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:31,0:26:80.66:81,0,771	1/1:2,0:2:2.98:22,3,0	0/0:78,0:13:32.42:0,32,590	0/0:75,0:17:32.95:0,33,842	0/1:7,3:10:0:0,0,0	0/0:18,0:18:38.72:0,39,927	0/1:21,0:19:9.18:9,0,694	0/0:49,0:44:87.26:0,87,2029	0/0:31,0:31:43.50:0,43,1815	1/1:11,2:12:27.88:232,28,0	0/1:9,3:11:0:0,0,0	0/0:22,0:22:4.86:0,5,1059	0/0:21,0:21:28.70:0,29,895	0/0:19,0:18:11.70:0,12,882	0/0:17,0:17:42.14:0,42,959	0/1:12,5:16:48.76:227,0,49	1/1:12,3:14:24.90:195,25,0	1/1:5,0:5:11.16:79,11,0	0/1:22,1:20:84.02:190,0,84	0/0:20,0:19:27.09:0,27,635	0/0:50,0:45:53.80:0,54,1387	0/0:21,0:21:5.60:0,6,395	0/0:22,0:21:27.09:0,27,638	0/1:21,0:21:33.42:33,0,488	0/0:27,0:26:31.43:0,31,1039	0/0:29,0:27:51.80:0,52,1317	0/0:15,0:15:14.18:0,14,721	0/0:16,0:14:26.49:0,26,506
chr10	20562377	.	GGTGT	G	22647.64	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-5.813;DP=1096;FS=0.895;HRun=0;HaplotypeScore=207.1660;InbreedingCoeff=0.7593;MQ=51.70;MQ0=29;MQRankSum=5.602;QD=23.92;ReadPosRankSum=3.868;VQSLOD=4.7731;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:12,47:59:65.49:1073,65,0	1/1:6,9:16:21.06:333,21,0	0/0:77,0:9:9.03:0,9,181	0/0:71,0:9:4.71:0,5,217	1/1:2,16:18:21.07:356,21,0	1/1:11,15:26:33.11:546,33,0	1/1:11,25:36:5.14:577,5,0	1/1:21,26:47:57.15:861,57,0	1/1:5,37:42:72.33:1260,72,0	1/1:7,18:24:50.54:792,51,0	1/1:5,12:17:27.09:458,27,0	1/1:9,31:39:63.21:1069,63,0	1/1:15,21:36:45.34:762,45,0	1/1:9,34:43:75.02:1241,75,0	1/1:5,31:37:62.60:1045,63,0	1/1:4,20:24:29.93:476,30,0	1/1:9,32:41:43.05:1044,43,0	1/1:7,23:31:4.77:670,5,0	1/1:6,11:16:11.61:424,12,0	1/1:7,20:27:51.13:832,51,0	1/1:30,91:118:99:2565,153,0	1/1:9,25:34:33.01:560,33,0	1/1:16,10:26:45.15:734,45,0	1/1:24,49:72:41.76:1423,42,0	1/1:7,28:35:51.47:1150,51,0	1/1:9,32:41:96.20:1513,96,0	1/1:5,10:15:24.01:375,24,0	1/1:5,11:15:30.10:509,30,0
chr10	20564377	.	CACAT	C	2817	PASS	AB=1.000;AC=23;AF=0.442;AN=52;BaseQRankSum=-5.499;DP=780;FS=6.495;HRun=0;HaplotypeScore=165.4999;InbreedingCoeff=0.5817;MQ=78.73;MQ0=6;MQRankSum=-0.723;QD=8.48;ReadPosRankSum=2.607;VQSLOD=2.6133;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:48.10:0,48,794	1/1:8,7:15:15.05:231,15,0	./.	./.	1/1:4,12:16:33.11:507,33,0	0/1:26,0:26:9.98:10,0,539	0/1:39,0:39:25.91:26,0,297	0/0:32,0:32:2.97:0,3,20	0/0:40,0:40:55.07:0,55,998	1/1:16,16:32:48.11:670,48,0	1/1:7,6:13:15.05:231,15,0	0/0:27,0:27:27.08:0,27,467	0/0:16,0:16:24.54:0,25,412	0/0:28,0:28:24.05:0,24,423	1/1:16,14:28:27.09:415,27,0	1/1:20,0:32:18.02:168,18,0	1/1:18,0:28:9.01:84,9,0	1/1:11,10:20:27.09:415,27,0	1/1:8,0:17:17.98:156,18,0	0/0:29,0:29:2.99:0,3,23	0/0:38,0:38:33:0,33,455	0/1:25,0:25:69.58:70,0,513	0/0:28,0:28:39.01:0,39,653	0/0:35,0:35:36.08:0,36,599	0/0:21,0:21:18.05:0,18,301	0/0:23,0:23:19.68:0,20,582	0/1:26,0:26:28.73:29,0,490	0/1:12,0:12:0.85:1,0,341
chr10	20564425	.	T	TCATACAC	1613.13	PASS	AB=0.594;AC=14;AF=0.250;AN=56;BaseQRankSum=6.305;DP=837;FS=3.788;HRun=0;HaplotypeScore=194.3641;InbreedingCoeff=0.1775;MQ=61.18;MQ0=11;MQRankSum=1.093;QD=4.29;ReadPosRankSum=4.977;VQSLOD=2.3219;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:7,0:53:99:225,0,213	0/0:11,0:11:27.09:0,27,579	0/0:39,0:25:75.23:0,75,1605	0/0:30,0:21:55.40:0,55,949	0/0:23,0:23:66.23:0,66,1417	0/1:23,0:23:8.98:9,0,642	0/0:37,0:37:51.86:0,52,881	0/0:28,0:28:48.35:0,48,601	1/1:1,0:39:19.06:453,19,0	0/0:37,0:37:99:0,111,2028	0/0:16,0:16:45.15:0,45,998	1/1:2,0:31:2.12:194,2,0	0/1:3,0:30:0.05:168,0,0	0/1:2,0:25:75.80:140,0,76	0/0:26,0:24:54.05:0,54,1167	0/0:30,0:30:66.18:0,66,1391	0/0:29,0:29:62.50:0,63,997	0/0:29,0:29:78.20:0,78,1625	0/0:23,0:22:50.98:0,51,877	1/1:0,1:23:0.46:1,0,0	0/1:11,0:59:79:79,0,178	0/0:27,0:27:46.82:0,47,816	0/1:5,0:23:94.38:216,0,94	0/1:4,0:43:57.36:189,0,57	0/1:3,0:27:50.22:92,0,50	0/0:29,0:29:35.71:0,36,875	0/0:30,0:30:17.91:0,18,864	0/0:17,0:16:6.14:0,6,483
chr10	20565624	.	TTGAAAC	T	4536.59	PASS	AB=0.527;AC=7;AF=0.125;AN=56;BaseQRankSum=6.648;DP=713;FS=8.158;HRun=0;HaplotypeScore=156.7301;InbreedingCoeff=0.8334;MQ=85.57;MQ0=0;MQRankSum=-12.477;QD=47.26;ReadPosRankSum=1.630;VQSLOD=4.5259;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,117,4046	0/0:8,0:8:24.08:0,24,831	0/0:26,0:26:60.16:0,60,1809	0/0:22,0:22:60.21:0,60,1941	0/0:24,0:24:69.24:0,69,2429	0/0:22,0:22:63.22:0,63,2185	0/0:28,0:28:78.27:0,78,2738	0/0:26,0:26:72.25:0,72,2560	0/0:35,0:35:99:0,99,3371	0/0:22,0:22:66.23:0,66,2336	0/0:22,0:22:66.23:0,66,2233	0/0:33,0:33:93.32:0,93,3261	0/0:27,0:27:81.28:0,81,2756	0/0:32,0:32:90.31:0,90,3104	0/0:19,0:19:54.19:0,54,1876	0/1:3,26:29:34.76:1556,0,35	1/1:7,23:30:51.17:1205,51,0	1/1:4,12:16:27.09:638,27,0	1/1:4,17:21:18.84:1137,19,0	0/0:22,0:22:66.23:0,66,2347	0/0:33,0:33:93.29:0,93,3202	0/0:29,0:29:87.30:0,87,2992	0/0:26,0:26:72.25:0,72,2479	0/0:34,0:34:99:0,99,3410	0/0:25,0:25:66.22:0,66,2274	0/0:29,0:29:84.28:0,84,2910	0/0:23,0:23:69.22:0,69,2379	0/0:10,0:10:30.10:0,30,1070
chr10	20567668	.	CAA	C	15591.91	PASS	AB=0.565;AC=45;AF=0.804;AN=56;BaseQRankSum=-10.479;DP=756;FS=0.000;HRun=10;HaplotypeScore=113.1023;InbreedingCoeff=0.8738;MQ=64.85;MQ0=4;MQRankSum=-2.910;QD=24.29;ReadPosRankSum=3.170;VQSLOD=4.2978;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,39:43:99:1131,102,0	0/1:3,1:13:12.65:13,0,44	0/0:26,0:12:21.57:0,22,261	0/0:15,1:10:7.91:0,8,252	0/0:2,0:22:49.78:0,50,171	1/1:5,15:20:39.08:432,39,0	1/1:5,30:35:63.16:702,63,0	1/1:2,28:30:81.20:892,81,0	1/1:3,23:26:60:669,60,0	0/0:5,0:29:59.68:0,60,207	0/0:6,0:20:32.14:0,32,115	1/1:2,31:33:75.19:836,75,0	1/1:5,19:24:42.06:468,42,0	1/1:4,27:31:69.18:769,69,0	1/1:4,19:24:28.07:482,28,0	1/1:2,21:23:54.14:602,54,0	1/1:3,37:40:84.22:936,84,0	1/1:2,25:27:38.66:644,39,0	1/1:7,18:25:44.86:559,45,0	1/1:4,22:27:54.05:660,54,0	1/1:1,36:37:84.23:936,84,0	1/1:1,16:18:50.80:543,51,0	1/1:5,20:25:23.59:477,24,0	1/1:0,47:46:99:1204,108,0	1/1:2,30:32:81.21:903,81,0	1/1:0,27:29:66.02:833,66,0	1/1:1,24:25:60.16:667,60,0	1/1:0,8:8:21.06:234,21,0
chr10	20569224	.	G	GATT	6593.66	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=-0.480;DP=575;FS=14.531;HRun=0;HaplotypeScore=90.2899;InbreedingCoeff=0.9535;MQ=77.49;MQ0=0;MQRankSum=-1.314;QD=37.89;ReadPosRankSum=1.040;VQSLOD=4.6602;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:42:99:0,114,1735	1/1:0,0:9:24.08:316,24,0	0/0:22,0:18:36.56:0,37,375	0/1:20,0:18:0.44:0,0,499	1/1:1,0:23:65.82:718,66,0	0/0:12,0:13:39.04:0,39,638	0/0:19,0:19:51.06:0,51,828	0/0:36,0:36:99:0,102,1630	0/0:21,0:21:63.14:0,63,999	1/1:0,0:12:33.10:437,33,0	1/1:1,0:19:53.97:619,54,0	0/0:22,0:22:66.19:0,66,1116	0/0:11,0:11:33.10:0,33,569	0/0:10,0:10:27.07:0,27,463	0/0:18,0:18:54.09:0,54,825	1/1:1,14:16:35.71:802,36,0	1/1:1,24:29:54.10:1247,54,0	1/1:3,15:21:48.16:1127,48,0	1/1:4,17:25:75.15:1327,75,0	0/0:30,0:31:93.26:0,93,1544	0/0:15,0:15:45.11:0,45,694	0/0:16,0:16:48.14:0,48,794	0/0:26,0:26:78.18:0,78,1234	0/0:24,0:25:72.13:0,72,1183	0/0:15,0:16:48.14:0,48,819	0/0:25,0:25:73.78:0,74,1241	0/0:20,0:20:60.17:0,60,998	0/0:11,0:12:20.82:0,21,315
chr10	20569371	.	AT	A	1059.26	PASS	AB=0.795;AC=12;AF=0.214;AN=56;BaseQRankSum=7.664;DP=498;FS=7.811;HRun=13;HaplotypeScore=56.3593;InbreedingCoeff=0.6538;MQ=67.63;MQ0=3;MQRankSum=1.330;QD=10.09;ReadPosRankSum=0.423;VQSLOD=2.4477;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:40,1:41:77.21:0,77,893	1/1:0,3:4:10.99:72,11,0	0/0:11,1:9:0.04:0,0,111	0/0:21,0:9:0.75:0,1,67	1/1:9,15:24:32.95:387,33,0	0/0:15,0:16:38.87:0,39,350	0/0:23,1:25:47.44:0,47,584	0/0:26,2:28:7.25:0,7,388	0/0:11,0:12:32.89:0,33,306	1/1:4,15:20:40.71:288,41,0	1/1:2,9:12:28.58:196,29,0	0/0:22,1:23:38.18:0,38,528	0/0:12,1:14:19.87:0,20,312	0/0:13,0:13:33:0,33,307	1/1:3,17:20:35.75:263,36,0	0/0:13,1:14:19.94:0,20,337	0/0:24,0:24:32.57:0,33,441	0/0:19,0:19:32.91:0,33,292	0/0:21,1:22:14.05:0,14,283	0/0:10,0:10:20.99:0,21,184	0/0:17,0:17:42.07:0,42,409	0/0:16,0:16:42.05:0,42,398	0/0:16,0:16:35.33:0,35,311	0/0:20,2:22:4.26:0,4,365	0/0:11,2:13:11:0,11,246	0/0:15,0:15:30.03:0,30,283	0/1:17,4:21:14.70:15,0,337	0/1:2,1:3:12.90:13,0,49
chr10	20569691	.	CTCTGCAGTAAA	C	4675.56	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=10.836;DP=687;FS=0.000;HRun=0;HaplotypeScore=218.0060;InbreedingCoeff=0.9831;MQ=84.07;MQ0=0;MQRankSum=-9.228;QD=77.93;ReadPosRankSum=2.270;VQSLOD=3.9934;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:57:99:0,172,9395	1/1:2,3:5:9.03:326,9,0	0/0:19,0:19:57.17:0,57,2024	0/0:23,0:23:57.18:0,57,2452	1/1:2,11:13:27.09:974,27,0	0/0:20,0:20:60.21:0,60,3165	0/0:37,0:37:99:0,108,5972	0/0:30,0:30:90.30:0,90,4564	0/0:25,0:25:75.26:0,75,4012	1/1:5,24:29:69.24:2377,69,0	1/1:0,13:13:30.06:998,30,0	0/0:33,0:33:99:0,99,5414	0/0:24,0:24:72.25:0,72,4182	0/0:22,0:22:60.19:0,60,2943	0/0:28,0:28:84.27:0,84,4420	0/0:21,0:21:63.20:0,63,3358	0/0:39,0:39:99:0,117,6008	0/0:23,0:23:69.24:0,69,3703	0/0:24,0:24:69.24:0,69,3829	0/0:24,0:24:72.25:0,72,4017	0/0:26,0:26:78.27:0,78,4300	0/0:16,0:16:48.16:0,48,2517	0/0:22,0:22:66.23:0,66,3580	0/0:24,0:24:72.25:0,72,3968	0/0:26,0:26:78.27:0,78,4405	0/0:27,0:27:81.26:0,81,4325	0/0:24,0:24:66.23:0,66,3626	0/0:13,0:13:39.13:0,39,2179
chr10	20569977	.	AT	A	4118.22	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=12.540;DP=581;FS=1.110;HRun=10;HaplotypeScore=60.6312;InbreedingCoeff=0.9909;MQ=71.64;MQ0=1;MQRankSum=-3.469;QD=21.45;ReadPosRankSum=2.198;VQSLOD=4.6721;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,2:35:35.21:0,35,828	1/1:0,7:7:14.99:130,15,0	0/0:12,0:12:23.48:0,23,213	0/0:10,0:9:12.02:0,12,121	1/1:0,20:20:56.99:495,57,0	0/0:20,0:20:47.99:0,48,506	0/0:18,0:18:48.13:0,48,531	0/0:25,0:25:60.14:0,60,652	0/0:31,0:31:81.17:0,81,874	1/1:2,21:23:32.79:511,33,0	1/1:2,15:17:38.98:339,39,0	0/0:25,0:25:63.17:0,63,697	0/0:12,0:12:30.06:0,30,320	0/0:22,1:23:34.11:0,34,604	0/0:18,0:18:48.13:0,48,531	1/1:4,10:14:26.98:234,27,0	1/1:6,39:45:99:990,114,0	1/1:4,32:36:92.98:807,93,0	1/1:4,26:30:44.77:613,45,0	0/0:21,0:22:56.99:0,57,612	0/0:9,0:9:24.06:0,24,266	0/0:12,0:12:36.09:0,36,391	0/0:23,0:23:60.62:0,61,656	0/0:12,0:12:29.62:0,30,332	0/0:15,0:17:35.93:0,36,379	0/0:35,0:35:87.24:0,87,962	0/0:15,0:15:45.11:0,45,490	0/0:15,0:15:45.12:0,45,498
chr10	20570651	.	A	AT	17228.20	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-16.493;DP=626;FS=0.309;HRun=1;HaplotypeScore=59.4766;InbreedingCoeff=0.9996;MQ=73.09;MQ0=0;MQRankSum=-1.973;QD=41.31;ReadPosRankSum=3.318;VQSLOD=5.3350;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,36:37:99:1574,105,0	0/0:9,0:9:27.07:0,27,336	0/0:13,0:13:32.90:0,33,340	0/0:9,0:9:27.04:0,27,312	0/0:19,0:19:54.17:0,54,699	1/1:0,18:18:51.17:764,51,0	1/1:0,31:31:84.28:1259,84,0	1/1:2,32:34:80.72:1334,81,0	1/1:1,22:23:69.21:1012,69,0	0/0:18,0:18:54.17:0,54,697	0/0:17,0:17:51.17:0,51,660	1/1:0,26:26:69.23:1034,69,0	1/1:2,28:30:81.27:1200,81,0	1/1:0,29:29:81.27:1214,81,0	0/0:24,0:24:72.22:0,72,920	0/0:23,0:23:66.21:0,66,857	0/0:37,0:37:99:0,108,1400	0/0:19,0:19:57.16:0,57,723	0/0:21,0:21:60.19:0,60,767	1/1:0,21:21:57.19:854,57,0	1/1:1,34:35:81.27:1214,81,0	1/1:0,15:15:42.14:620,42,0	1/1:0,22:22:63.68:945,64,0	1/1:0,21:21:63.21:943,63,0	1/1:0,24:24:72.24:1078,72,0	1/1:0,18:18:54.17:791,54,0	1/1:0,21:21:60.20:899,60,0	1/1:0,12:12:33.11:494,33,0
chr10	20572510	.	G	GCACACA	4132.67	PASS	AB=0.828;AC=29;AF=0.558;AN=52;BaseQRankSum=-8.221;DP=563;FS=2.200;HRun=0;HaplotypeScore=153.3288;InbreedingCoeff=0.5246;MQ=54.88;MQ0=14;MQRankSum=-5.040;QD=12.34;ReadPosRankSum=-4.206;VQSLOD=1.7781;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:35:0:0,0,0	0/0:3,0:7:2.86:0,3,42	./.	./.	0/0:1,0:5:5.75:0,6,53	0/1:16,0:18:15.59:88,0,16	1/1:17,3:20:3.01:36,3,0	1/1:27,0:24:31.50:351,31,0	1/1:12,7:18:18.06:515,18,0	0/0:18,0:22:8.71:0,9,215	0/0:14,0:23:18.06:0,18,252	1/1:10,7:23:9.03:147,9,0	0/1:11,3:15:49.15:186,0,49	1/1:9,4:15:6.02:193,6,0	0/0:8,0:22:38.79:0,39,499	0/0:3,0:11:24.08:0,24,335	0/0:13,0:23:29.92:0,30,399	0/0:13,0:28:29.81:0,30,418	0/1:11,0:14:7.33:7,0,37	1/1:3,0:12:11.20:152,11,0	0/0:19,0:32:2.66:0,3,6	0/1:12,4:18:1.97:125,0,2	1/1:7,6:14:6.02:194,6,0	1/1:7,2:20:7.96:172,8,0	1/1:7,11:24:15.05:367,15,0	1/1:10,12:27:45.08:828,45,0	1/1:8,10:21:18.06:580,18,0	1/1:3,3:9:5.71:193,6,0
chr10	20576652	.	C	CA	1922.06	PASS	AB=0.916;AC=11;AF=0.196;AN=56;BaseQRankSum=-3.882;DP=418;FS=14.816;HRun=10;HaplotypeScore=47.5839;InbreedingCoeff=0.6636;MQ=70.75;MQ0=0;MQRankSum=-0.688;QD=12.24;ReadPosRankSum=-0.883;VQSLOD=1.1447;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:16,2:21:18.94:19,0,243	0/0:10,0:10:26.97:0,27,222	0/0:9,0:9:11.46:0,11,85	0/0:6,0:4:3.47:0,3,25	0/0:20,0:21:30.36:0,30,330	0/0:16,0:17:46.97:0,47,375	0/0:13,0:14:34.99:0,35,277	0/1:31,3:34:1.09:1,0,402	0/0:14,0:14:35.94:0,36,295	0/0:15,0:15:32.94:0,33,270	0/0:20,0:20:41.91:0,42,343	0/0:7,0:7:11.98:0,12,98	0/0:10,0:10:23.95:0,24,197	0/0:12,0:12:29.92:0,30,244	0/0:14,0:14:29.94:0,30,243	1/1:2,13:15:26.27:314,26,0	1/1:2,30:34:71.35:932,71,0	1/1:7,16:25:44.81:445,45,0	1/1:3,11:16:38.80:369,39,0	0/0:16,0:16:35.93:0,36,296	0/1:10,1:11:8.02:8,0,148	0/0:10,0:10:29.95:0,30,243	0/0:7,0:8:17:0,17,129	0/0:5,0:6:17.02:0,17,129	0/0:9,0:9:23.96:0,24,197	0/0:18,0:19:37.94:0,38,297	0/0:14,0:14:38.93:0,39,318	0/0:10,0:10:11.96:0,12,98
chr10	20577134	.	A	ACAGG	5634.22	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-11.286;DP=539;FS=1.529;HRun=0;HaplotypeScore=89.0433;InbreedingCoeff=0.9485;MQ=77.14;MQ0=0;MQRankSum=-2.134;QD=57.49;ReadPosRankSum=2.888;VQSLOD=6.0694;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,111,1923	0/0:6,0:6:12.04:0,12,210	0/0:12,0:12:17.95:0,18,275	0/0:14,0:14:27.05:0,27,440	0/0:7,0:7:15.05:0,15,265	0/0:22,0:22:48.15:0,48,814	0/0:29,0:29:69.22:0,69,1184	0/0:22,0:22:51.17:0,51,894	0/0:11,0:11:30.10:0,30,525	0/0:17,0:17:45.15:0,45,789	0/0:9,0:9:14.62:0,15,230	0/0:20,0:20:48.16:0,48,848	0/0:15,0:15:33.11:0,33,583	0/0:16,0:16:39.13:0,39,683	0/0:25,0:25:66.14:0,66,1096	1/1:3,11:14:33.11:846,33,0	1/1:7,29:36:87.26:2175,87,0	1/1:4,30:34:81.28:2079,81,0	1/1:5,8:14:24.06:534,24,0	0/0:9,0:9:21.06:0,21,343	0/0:64,0:64:99:0,154,2674	0/0:2,0:2:6.02:0,6,106	0/0:14,0:14:33.10:0,33,546	0/0:31,0:31:75.26:0,75,1324	0/0:16,0:16:42.13:0,42,715	0/0:23,0:23:60.14:0,60,973	0/0:9,0:9:24.06:0,24,395	0/0:7,0:7:21.07:0,21,371
chr10	20580770	.	CTTGGTTGG	C	4920.31	PASS	AB=0.756;AC=35;AF=0.729;AN=48;BaseQRankSum=-2.735;DP=658;FS=0.000;HRun=0;HaplotypeScore=163.9956;InbreedingCoeff=0.4409;MQ=66.87;MQ0=6;MQRankSum=-5.034;QD=11.23;ReadPosRankSum=-0.416;VQSLOD=3.7395;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:15,26:41:12.04:217,12,0	0/0:6,0:12:8.98:0,9,73	./.	./.	0/1:14,0:21:1.86:2,0,235	1/1:14,5:19:3:74,3,0	1/1:13,0:13:14.95:175,15,0	./.	1/1:10,5:15:9.03:219,9,0	0/0:20,0:36:47.94:0,48,428	0/0:14,0:22:11.95:0,12,247	1/1:14,2:16:17.99:370,18,0	0/1:11,9:21:12.36:210,0,12	1/1:10,7:17:12.04:294,12,0	0/0:22,0:22:33.10:0,33,1125	1/1:13,9:22:8.95:219,9,0	0/1:28,0:28:8.30:135,0,8	0/1:18,14:32:5.96:210,0,6	1/1:19,4:23:15.05:361,15,0	1/1:11,23:34:41.94:743,42,0	1/1:15,0:15:21.04:417,21,0	0/1:17,0:36:6.23:216,0,6	./.	1/1:17,0:17:23.86:319,24,0	1/1:8,10:18:9.03:220,9,0	1/1:13,9:22:12.04:283,12,0	1/1:9,12:21:5.85:107,6,0	1/1:5,2:7:6.02:133,6,0
chr10	20583763	.	A	AATGGTC	37579.95	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=12.340;DP=588;FS=10.376;HRun=0;HaplotypeScore=199.7858;InbreedingCoeff=0.9650;MQ=61.81;MQ0=0;MQRankSum=-16.335;QD=83.14;ReadPosRankSum=0.681;VQSLOD=5.0950;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,26:38:69.18:2307,69,0	0/0:7,0:7:21.07:0,21,505	0/0:30,0:30:72.70:0,73,1607	0/0:21,0:21:45.15:0,45,1174	0/0:22,0:22:63.22:0,63,1502	1/1:2,17:19:51.13:1745,51,0	1/1:8,15:23:57.14:1758,57,0	1/1:15,10:25:69.23:2158,69,0	1/1:5,22:27:69.24:2477,69,0	0/0:19,0:19:57.20:0,57,1320	0/0:16,0:16:48.16:0,48,1131	1/1:7,15:22:54.17:1790,54,0	1/1:10,19:29:84.24:2656,84,0	1/1:6,18:24:69.24:2291,69,0	0/0:21,0:21:63.22:0,63,1513	1/1:7,25:33:93.28:3163,93,0	1/1:8,24:32:87.30:3109,87,0	1/1:2,4:7:18.06:613,18,0	1/1:11,8:19:39.12:1222,39,0	1/1:6,14:20:48.16:1648,48,0	1/1:4,6:10:18.06:647,18,0	1/1:7,19:26:57.03:2006,57,0	1/1:3,19:23:48.16:1721,48,0	1/1:6,10:16:30.10:1028,30,0	1/1:4,9:13:36.12:1251,36,0	1/1:9,17:26:72.21:2369,72,0	1/1:2,17:19:45.15:1514,45,0	1/1:0,1:1:3.01:108,3,0
chr10	20583790	.	T	TG	14948.76	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=12.638;DP=567;FS=26.115;HRun=3;HaplotypeScore=197.6113;InbreedingCoeff=0.9523;MQ=54.28;MQ0=0;MQRankSum=-15.196;QD=34.44;ReadPosRankSum=2.137;VQSLOD=1.5393;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,32:33:81.24:1095,81,0	0/0:9,0:9:24.07:0,24,288	0/0:26,0:25:67.38:0,67,755	0/0:30,0:30:66.55:0,67,852	0/0:14,0:14:36.11:0,36,432	1/1:1,13:14:39.09:523,39,0	1/1:3,10:13:30.10:419,30,0	1/1:4,21:25:63.18:861,63,0	1/1:4,31:35:93.31:1299,93,0	0/0:18,0:18:51.16:0,51,609	0/0:14,0:14:38.95:0,39,442	1/1:3,17:20:57.19:776,57,0	1/1:4,17:21:51.17:712,51,0	1/1:7,19:26:63.20:859,63,0	0/0:22,0:22:63.18:0,63,743	1/1:5,29:34:87.29:1214,87,0	1/1:4,24:28:69.17:963,69,0	1/1:1,4:5:12.04:168,12,0	1/1:2,21:23:63.21:881,63,0	1/1:4,20:24:60.20:837,60,0	1/1:3,5:8:8.96:126,9,0	1/1:1,23:24:63.21:877,63,0	1/1:2,16:18:42.10:562,42,0	1/1:4,12:16:27.09:376,27,0	1/1:3,17:20:54.17:739,54,0	1/1:1,25:26:75.25:1046,75,0	1/1:3,14:17:42.14:574,42,0	1/1:3,1:4:3.01:42,3,0
chr10	20583836	.	TGGG	T	12570.07	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=4.529;DP=518;FS=46.152;HRun=10;HaplotypeScore=139.6181;InbreedingCoeff=0.9721;MQ=70.87;MQ0=1;MQRankSum=-10.349;QD=30.51;ReadPosRankSum=5.383;VQSLOD=0.3622;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,24:31:57.15:768,57,0	0/0:4,0:8:12.04:0,12,196	0/0:21,0:21:38.60:0,39,676	0/0:19,0:18:11.86:0,12,573	0/0:5,0:10:23.98:0,24,269	1/1:1,12:13:36.12:486,36,0	1/1:1,11:12:30.09:393,30,0	1/1:12,16:28:57.15:759,57,0	1/1:4,23:27:63.18:844,63,0	0/0:7,0:15:36.10:0,36,532	0/0:2,0:9:12.04:0,12,192	1/1:3,20:23:54.15:732,54,0	1/1:4,11:15:13.17:389,13,0	1/1:0,20:20:45.14:613,45,0	0/0:23,0:23:60.19:0,60,1153	1/1:3,26:29:72.22:982,72,0	1/1:4,14:18:42.13:573,42,0	1/1:1,8:9:15.03:205,15,0	1/1:4,15:19:42.12:573,42,0	1/1:4,19:23:43.48:596,43,0	1/1:3,13:16:36.10:474,36,0	1/1:2,25:27:69.22:927,69,0	1/1:2,15:17:36.12:489,36,0	1/1:3,17:20:42.13:573,42,0	1/1:1,15:16:45.15:599,45,0	1/1:3,18:21:51.16:696,51,0	1/1:0,21:21:51.17:696,51,0	1/1:0,7:7:15.05:205,15,0
chr10	20584937	.	ACAACAAC	A	2479.36	PASS	AB=0.984;AC=22;AF=0.393;AN=56;BaseQRankSum=-0.690;DP=397;FS=0.000;HRun=0;HaplotypeScore=116.2037;InbreedingCoeff=-0.3795;MQ=46.05;MQ0=16;MQRankSum=-4.553;QD=9.25;ReadPosRankSum=-8.708;VQSLOD=-0.2274;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:17:99:272,0,110	0/0:8,0:8:14.96:0,15,502	0/0:8,0:5:4.36:0,4,210	0/0:17,0:9:15.04:0,15,385	0/0:19,0:19:57.20:0,57,2043	0/0:15,0:12:21.50:0,21,322	0/1:9,0:7:63.82:96,0,64	0/1:23,2:18:99:282,0,174	0/1:10,0:10:99:171,0,128	0/0:20,0:17:51.17:0,51,1600	0/0:21,0:19:51.18:0,51,1705	0/1:10,0:7:31.40:31,0,111	0/1:13,0:9:31.82:205,0,32	0/1:8,0:6:77.87:87,0,78	0/0:21,0:19:48.16:0,48,1682	0/1:18,0:16:23.79:24,0,436	0/1:17,0:15:63.84:64,0,120	0/1:13,0:13:18.90:19,0,268	0/1:14,0:13:99:178,0,127	0/1:11,0:8:49.19:123,0,49	1/1:6,0:3:3.01:34,3,0	0/1:15,0:13:50.97:166,0,51	1/1:7,0:5:8.48:84,8,0	0/1:6,0:4:35.09:76,0,35	0/1:13,0:11:3.65:124,0,4	0/1:23,1:24:99:383,0,338	0/1:17,0:12:99:120,0,215	0/1:5,1:5:32.01:105,0,32
chr10	20585049	.	ACCT	A	2352.80	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=5.807;DP=549;FS=4.325;HRun=0;HaplotypeScore=125.5091;InbreedingCoeff=0.9886;MQ=88.70;MQ0=0;MQRankSum=-2.474;QD=34.10;ReadPosRankSum=2.538;VQSLOD=3.9188;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:46:99:0,126,2825	0/0:4,0:4:12.04:0,12,264	0/0:21,0:21:57.19:0,57,1206	0/0:23,0:23:63.21:0,63,1316	0/0:33,0:33:93.32:0,93,2097	0/0:18,0:18:54.19:0,54,1223	0/0:14,0:14:42.14:0,42,952	0/0:28,0:28:75.24:0,75,1598	0/0:7,0:7:21.07:0,21,456	0/0:27,0:27:75.25:0,75,1621	0/0:20,0:20:57.20:0,57,1291	0/0:17,0:17:45.15:0,45,990	0/0:9,0:9:24.08:0,24,531	0/0:18,0:18:45.15:0,45,1012	0/0:22,0:22:57.20:0,57,1292	1/1:5,14:19:36.12:599,36,0	1/1:1,20:21:48.16:799,48,0	1/1:4,17:21:48.16:799,48,0	1/1:1,7:8:21.06:315,21,0	0/0:19,0:19:54.19:0,54,1216	0/0:20,0:19:57.20:0,57,1291	0/0:17,0:17:48.13:0,48,986	0/0:18,0:18:54.17:0,54,1180	0/0:19,0:19:54.19:0,54,1203	0/0:21,0:21:60.21:0,60,1352	0/0:22,0:22:57.20:0,57,1277	0/0:24,0:24:72.23:0,72,1573	0/0:12,0:12:36.11:0,36,772
chr10	20585111	.	GAGATAGAT	G	1276.07	PASS	AB=0.860;AC=22;AF=0.688;AN=32;BaseQRankSum=-3.755;DP=500;FS=9.418;HRun=0;HaplotypeScore=185.1360;InbreedingCoeff=0.3017;MQ=75.57;MQ0=2;MQRankSum=-2.982;QD=5.50;ReadPosRankSum=-0.626;VQSLOD=1.7183;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:34,0:36:0.04:0,0,0	./.	./.	./.	0/0:20,0:23:0:0,0,0	1/1:11,6:17:9.03:218,9,0	./.	./.	1/1:10,5:15:9.03:218,9,0	./.	0/1:13,0:13:0:0,0,0	0/0:14,0:18:11.99:0,12,120	0/0:12,0:16:6.02:0,6,208	1/1:6,5:11:6.02:145,6,0	1/1:16,9:25:12.04:272,12,0	1/1:14,1:15:3.01:73,3,0	1/1:21,0:21:3.01:41,3,0	./.	./.	0/1:16,0:23:9.98:10,0,83	1/1:14,0:14:6.01:61,6,0	./.	1/1:7,4:11:9.03:218,9,0	1/1:15,0:15:3.01:41,3,0	./.	./.	0/1:10,0:16:17.57:87,0,18	./.
chr10	20585929	.	CT	C	18744.81	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=9.582;DP=626;FS=15.449;HRun=1;HaplotypeScore=63.8398;InbreedingCoeff=0.9998;MQ=82.18;MQ0=0;MQRankSum=-4.838;QD=38.02;ReadPosRankSum=2.976;VQSLOD=3.8126;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,39:39:99:1420,102,0	0/0:10,0:10:30.07:0,30,448	0/0:18,0:17:44.84:0,45,638	0/0:20,0:20:52.28:0,52,770	0/0:29,0:29:87.26:0,87,1317	1/1:0,17:17:48.16:670,48,0	1/1:0,18:18:42.14:585,42,0	1/1:0,31:31:93.23:1251,93,0	1/1:0,12:12:33.11:461,33,0	0/0:18,0:18:54.18:0,54,842	0/0:18,0:18:51.17:0,51,815	1/1:0,17:17:45.15:626,45,0	1/1:0,21:21:54.18:750,54,0	1/1:0,27:27:78.26:1089,78,0	0/0:20,0:20:60.19:0,60,935	1/1:0,19:19:54.18:751,54,0	1/1:0,28:28:75.25:1045,75,0	1/1:0,33:33:87.29:1209,87,0	1/1:0,28:28:78.26:1088,78,0	1/1:0,23:23:60.20:826,60,0	1/1:0,45:45:99:1802,129,0	1/1:0,15:15:36.12:503,36,0	1/1:0,16:16:45.15:617,45,0	1/1:0,23:23:69.23:964,69,0	1/1:0,20:20:51.17:713,51,0	1/1:0,21:21:63.21:870,63,0	1/1:0,27:27:69.21:963,69,0	1/1:0,13:13:39.13:545,39,0
chr10	20586060	.	C	CGAGA	3872.02	PASS	AB=0.805;AC=33;AF=0.660;AN=50;BaseQRankSum=-4.859;DP=407;FS=7.229;HRun=0;HaplotypeScore=100.0541;InbreedingCoeff=0.5238;MQ=50.60;MQ0=6;MQRankSum=1.573;QD=13.73;ReadPosRankSum=-2.004;VQSLOD=2.1450;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:17,7:25:20.66:367,21,0	0/0:6,0:9:3.44:0,3,12	./.	0/1:25,0:11:0:0,0,0	0/0:12,0:26:0.86:0,1,2	1/1:17,0:20:29.52:402,30,0	1/1:5,2:8:5.75:83,6,0	1/1:29,0:29:25:214,25,0	0/0:6,0:11:24.03:0,24,223	0/0:6,0:15:10.25:0,10,85	0/0:7,0:17:6.48:0,6,57	1/1:9,0:9:9.03:179,9,0	1/1:6,0:5:3.01:66,3,0	1/1:8,0:8:6.02:88,6,0	0/0:3,0:6:3:0,3,28	0/0:5,0:6:3:0,3,28	./.	1/1:11,0:12:0.47:1,0,0	./.	1/1:15,2:20:29.51:417,30,0	1/1:4,1:4:8.99:133,9,0	1/1:3,6:11:9.03:212,9,0	1/1:7,3:12:6.01:96,6,0	1/1:6,4:10:6.02:142,6,0	1/1:7,5:13:9.03:203,9,0	0/1:16,8:28:2.14:696,0,2	0/1:15,5:25:5.07:356,0,5	1/1:14,1:15:12.03:215,12,0
chr10	20587331	.	G	GGGA	29687.75	PASS	AB=0.566;AC=41;AF=0.732;AN=56;BaseQRankSum=-12.244;DP=665;FS=3.970;HRun=0;HaplotypeScore=86.0096;InbreedingCoeff=0.9092;MQ=85.61;MQ0=1;MQRankSum=-7.631;QD=58.67;ReadPosRankSum=1.124;VQSLOD=6.5205;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,28:30:78.27:1765,78,0	0/0:13,0:13:39.13:0,39,649	0/0:26,0:26:78.27:0,78,1269	0/0:22,0:21:56.27:0,56,866	0/0:24,0:24:72.25:0,72,1199	1/1:3,30:33:96.33:2156,96,0	1/1:2,16:19:48.16:1086,48,0	1/1:3,32:40:99:2348,117,0	1/1:2,31:33:93.32:2107,93,0	0/0:25,0:25:72.24:0,72,1175	0/0:21,0:21:57.19:0,57,949	1/1:1,30:31:90.31:2007,90,0	1/1:1,20:22:60.21:1359,60,0	1/1:2,18:20:57.20:1264,57,0	0/0:28,0:28:81.28:0,81,1346	1/1:1,17:18:45.15:1008,45,0	1/1:0,12:12:30.10:680,30,0	1/1:0,14:14:39.13:884,39,0	1/1:9,17:27:66.22:1445,66,0	1/1:1,27:30:75.26:1698,75,0	1/1:3,24:28:66.23:1491,66,0	1/1:2,11:13:36.12:784,36,0	1/1:6,21:28:66.23:1475,66,0	1/1:2,15:17:39.13:854,39,0	1/1:1,17:18:51.18:1154,51,0	0/1:7,23:30:21.71:1551,0,22	1/1:5,27:31:87.30:1960,87,0	1/1:0,10:11:27.09:612,27,0
chr10	20589097	.	A	AGGAGG	22589.23	PASS	AB=1.000;AC=39;AF=0.696;AN=56;BaseQRankSum=-6.985;DP=686;FS=3.967;HRun=0;HaplotypeScore=132.1118;InbreedingCoeff=0.7461;MQ=80.58;MQ0=2;MQRankSum=-7.672;QD=45.36;ReadPosRankSum=1.031;VQSLOD=5.1171;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,31:46:69.24:2006,69,0	0/0:10,0:10:27.09:0,27,521	0/0:33,0:28:39.11:0,39,664	0/0:35,0:33:43:0,43,756	0/0:28,0:28:63.22:0,63,1216	1/1:3,16:21:36.12:1053,36,0	1/1:8,21:31:60.21:1753,60,0	1/1:18,7:28:36.93:749,37,0	1/1:6,21:28:63.22:1844,63,0	0/0:30,0:30:63.04:0,63,1128	0/0:18,0:18:48.16:0,48,923	1/1:5,15:21:39.09:1060,39,0	1/1:11,12:25:33.11:965,33,0	1/1:8,18:28:54.19:1551,54,0	0/0:34,0:34:90.31:0,90,1737	1/1:25,0:25:24.95:952,25,0	0/1:18,0:18:11.87:402,0,12	0/1:16,0:16:37.80:341,0,38	0/1:25,0:25:37.56:805,0,38	1/1:4,13:18:41.95:955,42,0	1/1:14,18:33:42.13:1229,42,0	1/1:2,17:20:39.13:1142,39,0	1/1:4,12:16:33.11:966,33,0	1/1:8,15:24:33.11:932,33,0	1/1:6,13:19:30.10:877,30,0	1/1:7,15:23:51.17:1342,51,0	1/1:9,16:27:44.84:1312,45,0	1/1:1,4:5:12.04:352,12,0
chr10	20589103	.	G	GGAGGGGAGGA	12373.21	PASS	AB=1.000;AC=35;AF=0.625;AN=56;BaseQRankSum=9.776;DP=698;FS=0.353;HRun=0;HaplotypeScore=235.1493;InbreedingCoeff=0.4544;MQ=78.63;MQ0=2;MQRankSum=-8.851;QD=23.93;ReadPosRankSum=5.755;VQSLOD=3.7122;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:43,0:43:18.72:505,0,19	0/0:10,0:10:27.09:0,27,846	0/0:31,0:26:45.11:0,45,1090	0/0:38,0:36:48.35:0,48,1208	0/0:28,0:28:66.22:0,66,2001	0/1:22,0:22:0.11:271,0,0	0/1:33,0:33:30.70:450,0,31	0/1:35,0:35:99:226,0,128	1/1:31,0:31:20.87:511,21,0	0/0:26,0:26:60.20:0,60,1773	0/0:17,0:17:48.16:0,48,1468	0/1:26,0:25:52.38:273,0,52	0/1:22,0:22:38.48:235,0,38	1/1:26,0:26:59.96:538,60,0	0/0:31,0:31:90.31:0,90,2813	1/1:6,18:30:47.90:2455,48,0	1/1:9,9:23:21.07:1075,21,0	1/1:8,6:18:12.04:615,12,0	1/1:6,16:28:66.17:2709,66,0	1/1:17,0:17:29.91:248,30,0	1/1:30,0:30:21.97:354,22,0	0/1:23,0:23:29.69:276,0,30	1/1:15,0:15:8.98:248,9,0	1/1:23,0:23:7.55:248,8,0	1/1:19,0:19:32.97:282,33,0	1/1:22,0:22:3.98:373,4,0	1/1:27,0:27:25.33:379,25,0	1/1:4,0:4:11.99:100,12,0
chr10	20590323	.	AAC	A	1930.97	PASS	AB=0.830;AC=33;AF=0.611;AN=54;BaseQRankSum=-2.114;DP=584;FS=1.580;HRun=0;HaplotypeScore=100.9168;InbreedingCoeff=0.0557;MQ=64.99;MQ0=23;MQRankSum=1.471;QD=4.20;ReadPosRankSum=1.534;VQSLOD=2.6941;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:37:11.50:66,12,0	0/0:7,0:10:15:0,15,147	0/0:31,0:16:0:0,0,0	./.	0/0:12,0:16:23.47:0,23,195	0/1:12,5:16:35.61:56,0,36	0/1:19,2:21:1.96:66,0,2	0/1:23,0:21:15.89:26,0,16	1/1:12,8:18:11.93:130,12,0	0/0:11,0:17:29.44:0,29,268	0/0:9,0:15:8.50:0,8,66	1/1:12,8:21:23.89:242,24,0	0/1:7,2:9:17.94:27,0,18	0/1:9,6:16:29.76:97,0,30	0/1:17,2:20:31.72:32,0,119	1/1:12,1:16:8.85:79,9,0	1/1:22,8:31:14:143,14,0	0/1:12,4:17:8.25:79,0,8	1/1:15,2:16:6.02:65,6,0	0/1:22,2:25:23.03:111,0,23	0/1:21,10:32:19.53:142,0,20	0/1:14,6:22:23.91:138,0,24	1/1:13,8:22:17.88:177,18,0	1/1:20,4:31:23.39:186,23,0	1/1:12,2:17:8.85:79,9,0	0/1:16,1:16:25.41:30,0,25	1/1:15,9:23:9.02:98,9,0	1/1:2,1:3:3.01:33,3,0
chr10	20596065	.	TTG	T	136.15	PASS	AB=0.810;AC=2;AF=0.20;AN=10;BaseQRankSum=3.598;DP=187;FS=0.000;HRun=0;HaplotypeScore=70.5718;MQ=80.43;MQ0=53;MQRankSum=3.517;QD=3.17;ReadPosRankSum=-0.711;VQSLOD=1.8051;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:12,0:9:3.01:0,3,56	0/1:12,7:13:99:163,0,181	0/1:21,3:10:43.21:43,0,101	./.	./.	./.	./.	./.	0/0:16,0:12:33.11:0,33,626	./.	./.	./.	./.	0/0:23,0:20:0:0,0,0	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.
chr10	20596072	.	A	AC	224.27	PASS	AB=0.813;AC=2;AF=0.25;AN=8;BaseQRankSum=3.276;DP=203;FS=1.800;HRun=0;HaplotypeScore=54.5701;MQ=70.57;MQ0=79;MQRankSum=3.842;QD=5.75;ReadPosRankSum=-1.956;VQSLOD=2.6280;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	0/0:12,0:8:3.01:0,3,42	0/1:10,7:12:86.38:241,0,86	0/1:20,2:8:53.77:54,0,70	./.	./.	./.	./.	./.	0/0:19,0:12:33.11:0,33,461	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.
chr10	20600558	.	T	TG	936.15	PASS	AB=0.795;AC=7;AF=0.125;AN=56;BaseQRankSum=-4.207;DP=609;FS=4.792;HRun=10;HaplotypeScore=78.3472;InbreedingCoeff=0.4894;MQ=71.76;MQ0=0;MQRankSum=0.482;QD=8.21;ReadPosRankSum=-0.210;VQSLOD=2.1812;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:34:60.96:0,61,479	0/0:9,0:9:11.98:0,12,99	0/1:19,1:20:5.42:5,0,202	0/0:19,0:18:31.83:0,32,239	0/0:29,0:29:51.86:0,52,532	0/0:20,0:20:47.93:0,48,394	0/0:14,0:14:29.94:0,30,246	0/0:16,0:16:20.90:0,21,166	0/0:21,0:21:52.44:0,52,416	0/0:21,0:22:46.91:0,47,367	0/0:15,0:15:35.93:0,36,292	0/0:31,0:31:68.40:0,68,562	0/0:26,0:26:56.60:0,57,448	0/0:19,0:19:38.94:0,39,320	0/0:23,0:24:58.92:0,59,469	1/1:9,18:27:23.49:453,23,0	0/1:7,13:20:46.86:164,0,47	1/1:6,17:23:8.44:295,8,0	0/1:19,5:24:55.30:152,0,55	0/0:26,0:26:59.87:0,60,486	0/0:21,2:23:13.22:0,13,313	0/0:16,0:16:35.95:0,36,295	0/0:23,1:24:21.92:0,22,378	0/0:22,0:22:38.92:0,39,320	0/0:25,0:26:58.94:0,59,474	0/0:28,0:28:55.63:0,56,439	0/0:23,0:23:49.90:0,50,396	0/0:7,0:7:17.94:0,18,143
chr10	20603234	.	A	ATTT	11038.86	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-7.078;DP=575;FS=2.230;HRun=10;HaplotypeScore=84.1708;InbreedingCoeff=0.9759;MQ=78.06;MQ0=0;MQRankSum=-4.038;QD=30.75;ReadPosRankSum=-1.670;VQSLOD=3.8944;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,21:25:41.22:718,41,0	0/0:9,0:9:18.02:0,18,218	0/0:15,0:15:9.09:0,9,213	0/0:13,0:13:13.92:0,14,162	0/0:26,0:26:63.11:0,63,751	1/1:3,18:24:51.13:913,51,0	1/1:3,11:14:24.08:443,24,0	1/1:8,19:27:54.17:997,54,0	1/1:7,13:20:39.13:726,39,0	0/0:24,0:24:63.14:0,63,766	0/0:12,0:15:35.97:0,36,400	1/1:1,19:21:36.06:619,36,0	1/1:5,9:16:20.98:295,21,0	1/1:4,21:28:42.10:751,42,0	0/0:24,0:26:58.48:0,58,714	0/0:29,0:30:69.08:0,69,809	0/0:13,0:13:11.53:0,12,343	0/0:17,0:18:35.97:0,36,404	0/0:27,0:27:60.07:0,60,689	1/1:7,19:28:63.15:1029,63,0	1/1:5,9:19:16.38:206,16,0	1/1:2,16:20:44.87:734,45,0	1/1:3,15:21:26.73:484,27,0	1/1:5,12:17:30.57:558,31,0	1/1:4,7:11:16.25:234,16,0	1/1:10,19:32:66.16:1040,66,0	1/1:7,18:27:57.15:1003,57,0	1/1:2,5:8:15.05:288,15,0
chr10	20605480	.	T	TA	3178.29	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-12.461;DP=606;FS=1.999;HRun=3;HaplotypeScore=58.0303;InbreedingCoeff=0.9973;MQ=87.22;MQ0=0;MQRankSum=-2.385;QD=36.53;ReadPosRankSum=1.305;VQSLOD=4.2459;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,138,1630	0/0:6,0:6:18.05:0,18,215	0/0:22,0:22:60.12:0,60,674	0/0:24,0:24:66.67:0,67,782	0/0:15,0:15:45.14:0,45,540	0/0:15,0:15:45.14:0,45,540	0/0:27,0:27:72.19:0,72,839	0/0:28,0:28:69.21:0,69,827	0/0:20,0:20:54.16:0,54,648	0/0:31,0:31:84.25:0,84,999	0/0:11,0:11:30.09:0,30,359	0/0:18,0:18:51.13:0,51,588	0/0:18,0:18:48.13:0,48,564	0/0:10,0:10:30.09:0,30,360	0/0:28,0:28:84.26:0,84,1008	1/1:0,22:22:60.20:840,60,0	1/1:0,25:25:69.23:965,69,0	1/1:0,15:15:39.13:546,39,0	1/1:1,24:25:72.21:988,72,0	0/0:26,0:26:75.20:0,75,875	0/0:29,0:29:78.24:0,78,936	0/0:20,0:20:60.16:0,60,696	0/0:18,0:18:45.12:0,45,528	0/0:24,0:24:66.20:0,66,791	0/0:12,0:12:36.11:0,36,431	0/0:23,0:23:69.20:0,69,818	0/0:31,0:31:84.22:0,84,972	0/0:12,0:12:30.09:0,30,360
chr10	20605657	.	T	TG	379	PASS	AB=0.932;AC=27;AF=0.482;AN=56;BaseQRankSum=1.824;DP=431;FS=3.126;HRun=12;HaplotypeScore=111.6723;InbreedingCoeff=0.1570;MQ=76.71;MQ0=0;MQRankSum=0.000;QD=1.25;ReadPosRankSum=-4.293;VQSLOD=-0.6785;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:26,8:34:4.35:28,4,0	0/0:5,0:8:4.06:0,4,12	0/1:17,1:18:33.87:51,0,34	0/0:18,1:20:2.19:0,2,7	0/0:7,0:8:4.99:0,5,28	0/1:11,0:11:0:0,0,0	0/1:17,0:17:11.87:12,0,33	1/1:9,2:11:3:29,3,0	1/1:14,4:18:2.99:24,3,0	0/1:9,0:9:0:0,0,0	0/0:11,0:11:2.95:0,3,21	1/1:12,0:12:11.94:91,12,0	1/1:10,0:10:8.91:65,9,0	0/1:9,5:14:0:0,0,0	0/0:17,0:17:5.85:0,6,44	1/1:16,0:16:5.98:47,6,0	0/1:21,9:30:14.67:15,0,35	0/1:11,4:15:15.89:23,0,16	1/1:9,4:13:8.95:70,9,0	0/1:13,0:13:0:0,0,0	0/0:19,1:20:2.86:0,3,22	1/1:10,1:11:3.48:30,3,0	0/1:12,0:12:0:0,0,0	0/0:12,10:22:2.93:0,3,22	0/1:10,0:10:14.18:19,0,14	0/0:12,0:14:5.89:0,6,41	0/1:26,0:25:15.39:18,0,15	0/0:9,0:9:2.96:0,3,22
chr10	20605761	.	CAGAGAGAGAG	C	1369.19	PASS	AB=0.800;AC=23;AF=0.500;AN=46;BaseQRankSum=5.775;DP=460;FS=41.369;HRun=0;HaplotypeScore=128.2603;InbreedingCoeff=0.5236;MQ=75.10;MQ0=13;MQRankSum=-5.039;QD=7.36;ReadPosRankSum=0.552;VQSLOD=0.6758;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:22:14.99:0,15,213	0/0:9,0:8:3.01:0,3,99	./.	0/0:30,0:16:0.47:0,0,1	0/0:19,0:19:9.03:0,9,420	0/0:19,0:18:15.03:0,15,220	./.	0/0:21,0:21:1.55:0,2,4	0/1:15,0:20:15.91:50,0,16	0/0:18,0:18:27.09:0,27,1070	0/0:10,0:10:12.04:0,12,293	./.	1/1:7,3:11:6.02:157,6,0	1/1:6,3:9:3.01:88,3,0	0/0:13,0:15:17.65:0,18,516	1/1:9,0:17:18.06:418,18,0	1/1:14,0:19:6.02:140,6,0	1/1:16,0:17:3.01:70,3,0	1/1:10,0:14:8.87:209,9,0	1/1:11,3:14:3.01:88,3,0	0/0:14,0:13:2.97:0,3,20	./.	1/1:15,5:20:2.83:88,3,0	1/1:16,0:15:3.01:39,3,0	./.	0/0:22,0:19:11.77:0,12,139	1/1:16,4:20:3.01:88,3,0	1/1:8,1:8:3.01:88,3,0
chr10	20606884	.	C	CA	11500.07	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-14.940;DP=603;FS=8.041;HRun=6;HaplotypeScore=53.1005;InbreedingCoeff=0.9959;MQ=88.30;MQ0=0;MQRankSum=-7.712;QD=32.49;ReadPosRankSum=3.784;VQSLOD=4.9973;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,53:58:99:1795,144,0	0/0:8,0:8:24.05:0,24,245	0/0:20,0:20:48.06:0,48,479	0/0:25,0:25:65.78:0,66,620	0/0:29,0:29:81.17:0,81,819	1/1:2,17:19:48.15:604,48,0	1/1:4,21:25:63.20:793,63,0	1/1:3,28:31:84.25:1042,84,0	1/1:1,24:25:69.22:868,69,0	0/0:26,0:26:63.14:0,63,643	0/0:10,0:10:27.03:0,27,267	1/1:2,14:16:42.13:522,42,0	1/1:4,19:23:54.17:679,54,0	1/1:1,19:20:57.18:717,57,0	0/0:33,0:33:93.17:0,93,933	0/0:19,1:20:13.37:0,13,452	0/0:25,0:25:72.16:0,72,735	0/0:20,0:20:57.13:0,57,581	0/0:33,0:33:87.17:0,87,873	1/1:0,11:11:30.10:377,30,0	1/1:2,19:21:51.16:642,51,0	1/1:0,16:16:48.15:604,48,0	1/1:1,14:15:42.13:528,42,0	1/1:1,14:15:33.11:415,33,0	1/1:2,9:11:27.09:340,27,0	1/1:4,22:26:38.59:787,39,0	1/1:2,10:12:33.11:412,33,0	1/1:0,10:10:30.10:377,30,0
chr10	20607164	.	GGGGA	G	4070.06	PASS	AB=1.000;AC=11;AF=0.229;AN=48;BaseQRankSum=-5.707;DP=260;FS=6.427;HRun=0;HaplotypeScore=56.5693;InbreedingCoeff=0.5723;MQ=68.30;MQ0=23;MQRankSum=-0.893;QD=42.40;ReadPosRankSum=5.910;VQSLOD=3.1386;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:5:11.92:0,12,132	0/0:9,0:9:27.05:0,27,396	0/0:31,0:13:35.44:0,35,588	0/0:21,0:7:15.59:0,16,202	0/0:18,0:18:30.53:0,31,755	0/0:6,0:6:1.17:0,1,71	0/0:2,0:2:6.01:0,6,88	0/0:4,0:4:0.90:0,1,56	0/1:3,0:3:0.63:1,0,21	0/0:15,0:15:36.51:0,37,489	0/0:16,0:16:39.09:0,39,612	0/0:5,0:4:8.98:0,9,75	0/1:4,0:3:1.02:1,0,15	0/0:4,0:3:6.80:0,7,29	0/0:12,0:12:36.11:0,36,805	1/1:0,11:11:33.11:621,33,0	1/1:1,41:41:99:2011,108,0	1/1:1,16:16:42.10:754,42,0	1/1:0,16:16:48.04:683,48,0	0/1:3,0:3:0:0,0,0	./.	./.	./.	0/0:3,0:2:0.89:0,1,2	./.	0/0:2,0:2:2.99:0,3,24	0/0:2,0:1:3.01:0,3,31	0/0:1,0:1:1.82:0,2,5
chr10	20607167	.	GAAAAAA	G	1085.02	PASS	AB=0.500;AC=21;AF=0.457;AN=46;BaseQRankSum=-4.716;DP=251;FS=0.888;HRun=9;HaplotypeScore=81.1041;InbreedingCoeff=0.7564;MQ=76.41;MQ0=22;MQRankSum=-5.451;QD=32.88;ReadPosRankSum=-2.002;VQSLOD=0.7372;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,5:5:9.03:196,9,0	0/0:7,0:8:20.43:0,20,436	0/0:33,0:15:45.08:0,45,1087	0/0:23,0:9:24.06:0,24,646	0/0:19,0:20:57.20:0,57,1437	1/1:1,3:4:9.03:189,9,0	1/1:0,2:2:6.02:99,6,0	1/1:0,3:3:9.02:128,9,0	1/1:0,2:2:6.02:130,6,0	0/0:13,0:14:37.94:0,38,846	0/0:13,0:15:42.62:0,43,972	1/1:1,3:3:9.03:196,9,0	1/1:1,1:2:3.01:53,3,0	1/1:1,2:2:6.02:130,6,0	0/0:12,0:12:33.10:0,33,1005	0/0:11,0:11:33.11:0,33,724	0/0:42,0:41:99:0,108,2243	0/0:17,0:16:42.14:0,42,896	0/0:16,0:16:45.15:0,45,987	0/1:0,2:2:0:0,0,0	./.	./.	./.	./.	./.	0/0:1,0:1:3.01:0,3,66	1/1:1,1:1:3.01:66,3,0	1/1:0,1:1:3.01:65,3,0
chr10	20607799	.	A	AC	1115.87	PASS	AB=0.971;AC=21;AF=0.375;AN=56;BaseQRankSum=5.838;DP=631;FS=11.560;HRun=0;HaplotypeScore=131.5378;InbreedingCoeff=-0.2218;MQ=57.81;MQ0=17;MQRankSum=1.042;QD=3.07;ReadPosRankSum=0.805;VQSLOD=2.7423;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:29,1:29:43.84:44,0,72	0/0:13,0:13:36.07:0,36,480	0/0:67,0:25:10.19:0,10,258	0/0:52,0:17:1.90:0,2,246	0/0:24,0:24:62.98:0,63,816	0/1:25,0:25:50.69:51,0,72	1/1:13,0:13:2.60:39,3,0	0/1:29,2:31:61.92:130,0,62	0/1:18,0:18:58.14:58,0,62	0/0:22,0:22:54.11:0,54,658	0/0:19,0:19:51.51:0,52,617	0/1:17,3:20:7.58:119,0,8	1/1:15,3:18:5.86:164,6,0	0/1:16,4:20:36.49:142,0,36	0/0:15,0:15:39.06:0,39,454	0/0:16,0:16:1.96:0,2,54	0/0:28,0:28:1.32:0,1,119	0/0:12,0:10:4.48:0,4,55	0/1:20,0:20:16.38:16,0,103	0/1:16,0:16:13.42:13,0,106	1/1:11,0:11:5.81:59,6,0	0/1:19,0:19:31.24:74,0,31	0/1:12,0:12:11.64:27,0,12	0/1:23,0:23:28.93:34,0,29	0/1:28,0:27:4.04:153,0,4	0/1:28,0:27:3.76:85,0,4	0/1:20,1:21:47.60:48,0,60	0/1:10,0:10:17.38:17,0,30
chr10	20607805	.	C	CA	5362.89	PASS	AB=1.000;AC=43;AF=0.768;AN=56;BaseQRankSum=7.839;DP=642;FS=1.338;HRun=11;HaplotypeScore=127.5071;InbreedingCoeff=0.5996;MQ=59.62;MQ0=16;MQRankSum=-3.380;QD=9.82;ReadPosRankSum=2.383;VQSLOD=3.6738;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:13,16:29:42.10:521,42,0	0/0:11,0:14:31.92:0,32,238	0/1:65,0:21:17.80:18,0,78	0/1:54,0:18:8.36:14,0,8	0/0:25,1:26:10.93:0,11,378	1/1:12,12:26:44.43:473,44,0	1/1:1,13:14:16.05:172,16,0	1/1:20,8:28:46.78:410,47,0	1/1:13,3:17:8.31:173,8,0	0/0:23,0:23:47.75:0,48,369	0/0:19,0:19:29.70:0,30,363	1/1:14,6:20:39.82:380,40,0	1/1:11,5:16:25.50:270,26,0	1/1:16,4:21:37.84:338,38,0	0/0:13,0:14:34.75:0,35,248	1/1:16,0:16:22.33:102,22,0	1/1:25,0:26:30.02:139,30,0	1/1:14,0:12:5.60:26,6,0	1/1:20,0:20:3.02:78,3,0	0/1:19,0:19:17.72:18,0,87	1/1:6,4:11:17.85:152,18,0	1/1:6,14:21:29.77:330,30,0	1/1:3,10:13:12.33:117,12,0	1/1:6,16:23:20.86:189,21,0	1/1:5,21:25:38.48:472,38,0	1/1:8,23:32:66.85:639,67,0	1/1:18,3:22:8.74:189,9,0	1/1:5,5:11:0.85:144,1,0
chr10	20607812	.	A	AAAAAC	2734.91	PASS	AB=0.826;AC=8;AF=0.143;AN=56;BaseQRankSum=-2.659;DP=652;FS=0.000;HRun=0;HaplotypeScore=178.0118;InbreedingCoeff=0.7533;MQ=62.34;MQ0=16;MQRankSum=-6.326;QD=19.68;ReadPosRankSum=-0.130;VQSLOD=3.3109;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:39.76:0,40,373	0/0:15,0:15:38.91:0,39,633	0/0:66,0:24:43.55:0,44,408	0/1:52,0:17:0.72:1,0,41	0/0:28,0:28:69.16:0,69,1110	0/0:24,0:24:51.99:0,52,372	0/0:16,0:16:21.31:0,21,163	0/0:29,0:29:34.63:0,35,292	0/0:15,0:15:19.32:0,19,215	0/0:24,0:24:60.17:0,60,1024	0/0:19,0:19:50.99:0,51,947	0/0:21,0:21:59.12:0,59,402	0/0:19,0:19:41.63:0,42,281	0/0:19,0:19:43.62:0,44,300	0/0:17,0:17:48.12:0,48,706	1/1:3,13:18:27.05:629,27,0	1/1:5,20:28:43.38:967,43,0	0/1:7,6:13:21.28:162,0,21	1/1:7,18:26:60.58:1124,61,0	0/0:19,0:19:50.69:0,51,683	0/0:11,0:11:22.30:0,22,158	0/0:21,0:21:23.46:0,23,275	0/0:14,0:14:15.81:0,16,94	0/0:19,0:19:16.21:0,16,99	0/0:27,0:26:57.69:0,58,403	0/0:33,0:32:47.71:0,48,418	0/0:19,0:19:20.50:0,20,277	0/0:9,0:9:24.29:0,24,234
chr10	20608227	.	AGT	A	8086.70	PASS	AB=0.793;AC=35;AF=0.625;AN=56;BaseQRankSum=8.519;DP=668;FS=8.847;HRun=0;HaplotypeScore=86.2583;InbreedingCoeff=0.5916;MQ=67.87;MQ0=8;MQRankSum=0.435;QD=18.25;ReadPosRankSum=2.817;VQSLOD=4.7168;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,26:37:77.11:848,77,0	0/0:14,1:15:3.82:0,4,532	0/0:42,0:25:27.93:0,28,324	0/0:39,0:20:26.74:0,27,346	0/1:22,2:24:16.49:16,0,703	1/1:8,10:20:37.59:386,38,0	1/1:8,10:20:35.77:381,36,0	1/1:11,7:18:21.03:226,21,0	1/1:6,17:23:45.10:515,45,0	0/0:22,0:22:6.77:0,7,516	0/0:27,0:27:66.22:0,66,1022	0/1:3,14:17:11.23:352,0,11	1/1:2,10:13:26.91:297,27,0	1/1:8,20:29:15.74:638,16,0	0/0:25,1:26:18.85:0,19,768	0/0:21,1:23:7.78:0,8,754	0/0:29,1:30:39.90:0,40,1076	0/1:24,2:26:22.49:22,0,571	0/1:24,0:24:5.19:5,0,343	1/1:7,14:21:39.12:459,39,0	1/1:4,19:23:48.14:565,48,0	1/1:6,14:20:36.11:424,36,0	1/1:7,15:22:36.06:424,36,0	1/1:3,24:26:57.17:671,57,0	1/1:4,10:15:33.10:389,33,0	1/1:4,18:22:54.16:636,54,0	1/1:7,17:25:47.92:544,48,0	0/1:4,13:17:17.23:288,0,17
chr10	20608750	.	CAT	C	837.16	PASS	AB=0.990;AC=21;AF=0.404;AN=52;BaseQRankSum=4.659;DP=1031;FS=15.806;HRun=0;HaplotypeScore=179.5349;InbreedingCoeff=-0.5471;MQ=30.17;MQ0=187;MQRankSum=-0.801;QD=1.01;ReadPosRankSum=1.402;VQSLOD=2.0092;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:61,0:48:4.20:0,4,25	0/0:14,0:11:6.73:0,7,36	./.	./.	0/1:39,1:29:68.33:68,0,132	0/1:23,0:17:17.24:17,0,48	0/1:43,0:18:9.53:10,0,19	0/1:48,0:7:21.59:29,0,22	0/0:48,0:34:8.97:0,9,71	0/1:61,1:41:99:238,0,326	0/1:22,1:16:10.13:67,0,10	0/1:49,1:36:52.46:52,0,88	0/1:41,0:29:40.57:41,0,47	0/0:46,0:39:3.38:0,3,101	0/1:51,0:32:41.09:41,0,206	0/1:32,1:25:25.58:56,0,26	0/1:32,1:28:33.91:34,0,274	0/1:26,0:23:99:123,0,382	0/1:40,0:17:36.35:36,0,162	0/1:22,0:16:4.76:17,0,5	0/1:110,0:66:32.71:33,0,52	0/1:38,0:24:4.20:4,0,72	0/0:22,0:15:6.93:0,7,50	0/1:56,0:44:31.54:32,0,96	1/1:20,0:13:2.98:22,3,0	0/1:43,0:25:55.18:55,0,167	0/1:28,0:21:3.92:4,0,104	0/0:9,0:7:5.91:0,6,38
chr10	20608796	.	GACACAC	G	2249.02	PASS	AB=0.921;AC=21;AF=0.404;AN=52;BaseQRankSum=1.693;DP=1109;FS=8.093;HRun=0;HaplotypeScore=160.8933;InbreedingCoeff=0.2083;MQ=29.23;MQ0=175;MQRankSum=2.965;QD=3.25;ReadPosRankSum=1.752;VQSLOD=2.1010;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:55,2:43:12.82:157,13,0	0/0:11,0:9:8.39:0,8,175	./.	./.	0/0:40,0:23:39.10:0,39,683	0/1:22,2:18:56.89:169,0,57	0/1:48,5:24:12.12:34,0,12	0/0:82,0:13:10.14:0,10,502	1/1:47,3:39:18.03:237,18,0	0/0:69,0:39:92.97:0,93,2223	0/0:14,0:7:6.02:0,6,125	0/1:47,3:38:21.97:238,0,22	0/1:38,5:37:70.68:216,0,71	1/1:45,7:48:15.84:278,16,0	0/0:51,0:34:48.15:0,48,1308	0/0:37,0:30:27.18:0,27,506	0/0:29,0:25:44.43:0,44,944	0/0:20,0:17:36.11:0,36,718	0/0:41,0:13:31.96:0,32,497	0/0:16,3:11:2.92:0,3,17	0/1:134,2:81:87.43:87,0,292	1/1:25,4:20:20.87:227,21,0	0/1:20,1:16:7.82:33,0,8	0/1:56,4:52:59.59:125,0,60	1/1:14,4:13:2.81:50,3,0	0/1:42,1:18:99:253,0,106	0/1:21,1:19:9.01:214,0,9	1/1:5,1:5:8.95:108,9,0
chr10	20608814	.	CAG	C	40.36	PASS	AB=0.998;AC=9;AF=0.167;AN=54;BaseQRankSum=3.798;DP=1040;FS=0.000;HRun=0;HaplotypeScore=145.4277;InbreedingCoeff=-0.0679;MQ=31.83;MQ0=111;MQRankSum=-0.151;QD=0.15;ReadPosRankSum=0.476;VQSLOD=2.6328;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:56,1:41:2.92:3,0,80	0/1:12,0:11:11.51:12,0,70	./.	0/0:8,0:1:2.80:0,3,13	0/0:37,0:27:50.03:0,50,669	0/1:25,0:20:16.86:17,0,94	0/0:47,2:22:9.70:0,10,102	0/0:71,0:19:48.08:0,48,710	0/0:44,1:34:22.27:0,22,204	0/0:66,0:45:99:0,114,1787	0/0:10,0:7:8.88:0,9,98	0/0:39,2:37:4.76:0,5,166	0/1:45,0:35:7.80:8,0,208	0/1:51,0:48:28.23:28,0,157	0/0:38,0:32:52.80:0,53,897	0/0:37,0:32:12.70:0,13,415	0/0:26,0:23:44.78:0,45,739	0/0:19,0:16:42.06:0,42,626	0/0:44,0:16:40.91:0,41,478	0/0:17,0:13:8.89:0,9,140	0/0:137,0:78:0.31:0,0,233	0/0:35,0:27:16.80:0,17,132	0/0:18,0:17:1.22:0,1,39	0/0:57,0:47:19.90:0,20,230	0/0:18,0:14:5.68:0,6,68	0/1:45,0:26:77.23:77,0,500	0/1:22,0:19:5.63:6,0,183	1/1:8,0:8:2.60:10,3,0
chr10	20608830	.	CAG	C	554.18	PASS	AB=0.982;AC=18;AF=0.333;AN=54;BaseQRankSum=7.082;DP=918;FS=0.000;HRun=0;HaplotypeScore=135.6344;InbreedingCoeff=-0.3759;MQ=34.33;MQ0=89;MQRankSum=-1.460;QD=1.00;ReadPosRankSum=-6.211;VQSLOD=0.3543;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:43,1:30:38.92:108,0,39	0/1:8,0:8:3.71:4,0,107	./.	0/0:13,0:1:3.01:0,3,40	0/0:29,0:23:47.98:0,48,733	0/1:24,0:21:18.46:25,0,18	0/1:44,2:25:6.51:7,0,87	0/1:54,0:20:7.61:8,0,270	0/1:39,1:33:35.18:35,0,118	0/0:59,0:41:77.67:0,78,1566	0/0:11,0:8:11.97:0,12,156	0/1:38,0:34:0.12:0,0,88	0/1:34,0:28:17.73:18,0,119	0/1:41,2:41:45.75:116,0,46	0/0:40,0:34:57.18:0,57,1004	0/1:31,0:28:10.21:10,0,380	0/0:25,0:24:33.97:0,34,695	0/0:16,0:13:27.01:0,27,478	0/0:37,0:17:43.11:0,43,564	0/1:12,0:9:13.15:13,0,61	0/0:110,1:64:0.11:0,0,84	0/1:32,4:28:83.29:91,0,83	0/0:16,1:16:2.04:0,2,24	0/1:60,0:50:50.31:50,0,94	0/1:17,0:13:21.79:40,0,22	0/1:40,0:25:74.18:74,0,273	0/1:19,1:19:89.23:89,0,115	1/1:8,0:8:2.60:10,3,0
chr10	20608836	.	CAG	C	60.10	PASS	AB=0.985;AC=10;AF=0.185;AN=54;BaseQRankSum=4.335;DP=853;FS=24.747;HRun=0;HaplotypeScore=125.2237;InbreedingCoeff=-0.0799;MQ=35.02;MQ0=75;MQRankSum=1.320;QD=0.24;ReadPosRankSum=-4.050;VQSLOD=-0.3757;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:29:15.98:0,16,168	0/0:8,0:8:9:0,9,108	./.	0/0:17,0:1:3.01:0,3,37	0/0:29,0:24:51.17:0,51,970	0/1:21,0:18:20.83:21,0,49	0/0:44,0:24:17.72:0,18,253	0/0:47,0:20:48.02:0,48,622	0/0:36,0:30:12.04:0,12,368	0/0:58,0:43:73.62:0,74,1537	0/0:10,0:7:12.04:0,12,230	0/1:31,0:27:63.64:64,0,189	0/0:31,1:26:22.46:0,22,334	0/1:37,0:35:36.69:37,0,250	0/0:43,0:37:66.18:0,66,1132	0/0:30,0:29:7.97:0,8,391	0/0:25,0:24:36.01:0,36,579	0/0:13,0:12:30.07:0,30,526	0/0:31,0:17:34.75:0,35,617	0/0:12,0:11:11.84:0,12,195	0/0:93,2:52:9.94:0,10,173	0/1:33,0:25:5.21:5,0,161	0/1:16,0:15:18.07:18,0,50	0/1:52,2:45:16.92:17,0,282	0/0:18,0:14:14.87:0,15,189	0/1:38,1:26:11.36:11,0,691	0/1:16,1:16:9.92:10,0,257	1/1:6,0:6:2.60:10,3,0
chr10	20608882	.	C	CAGAG	1033.99	PASS	AB=0.818;AC=6;AF=0.115;AN=52;BaseQRankSum=0.431;DP=990;FS=4.205;HRun=0;HaplotypeScore=161.0977;InbreedingCoeff=0.0928;MQ=31.95;MQ0=82;MQRankSum=-3.175;QD=10.66;ReadPosRankSum=-0.933;VQSLOD=3.1589;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:37:18.53:0,19,307	0/0:16,0:12:5.05:0,5,66	./.	0/0:37,0:3:8.96:0,9,106	0/0:24,0:19:30.05:0,30,558	0/0:24,0:17:4.68:0,5,29	0/0:64,0:48:30.04:0,30,448	0/0:67,0:27:50.80:0,51,919	0/0:40,0:35:30.10:0,30,513	0/0:52,0:41:73.75:0,74,1441	0/0:14,0:14:20.99:0,21,384	0/0:37,0:29:14.60:0,15,235	0/0:38,0:29:34.03:0,34,504	0/0:37,0:33:26.99:0,27,479	0/0:61,0:50:69:0,69,1199	0/1:14,6:16:32.69:305,0,33	0/1:13,11:26:99:120,0,128	0/1:11,1:10:37.98:164,0,38	0/1:27,2:11:24.91:523,0,25	0/0:20,0:18:9.36:0,9,119	0/0:106,0:68:20.92:0,21,268	0/0:28,0:25:21.04:0,21,312	./.	0/0:55,0:42:27.06:0,27,421	0/0:28,0:23:12.89:0,13,269	0/0:38,0:26:46.38:0,46,855	0/0:23,0:19:33.24:0,33,444	1/1:7,0:6:3.01:40,3,0
chr10	20608886	.	CAG	C	1172.47	PASS	AB=0.987;AC=27;AF=0.519;AN=52;BaseQRankSum=6.009;DP=1039;FS=8.010;HRun=0;HaplotypeScore=155.4862;InbreedingCoeff=-0.4383;MQ=31.68;MQ0=90;MQRankSum=0.825;QD=1.34;ReadPosRankSum=1.690;VQSLOD=2.2560;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:55,1:43:11.48:66,0,11	0/1:16,0:12:1.12:1,0,53	./.	0/0:35,0:4:7.98:0,8,47	0/0:25,0:20:30.04:0,30,445	1/1:23,2:18:8.12:44,8,0	0/1:72,0:54:24.87:25,0,130	0/1:68,0:22:73.48:73,0,159	0/1:46,0:38:6.20:132,0,6	0/1:57,0:46:70.99:71,0,813	0/1:12,0:12:6.93:7,0,230	0/1:36,4:33:13.40:54,0,13	0/1:37,0:27:32.82:33,0,113	1/1:39,0:34:4.03:107,4,0	0/0:62,1:49:34.17:0,34,971	0/1:20,0:16:7.43:54,0,7	0/1:30,0:28:41.29:41,0,90	0/1:14,0:12:6.94:33,0,7	0/1:33,0:12:45.41:45,0,74	1/1:22,0:19:8.40:48,8,0	0/1:103,2:68:58.09:58,0,65	0/1:28,0:24:35.38:37,0,35	./.	0/1:60,0:46:37.44:93,0,37	0/1:28,0:23:33.25:42,0,33	0/1:37,3:27:99:137,0,167	0/1:21,1:19:9.12:105,0,9	1/1:7,0:6:2.45:16,2,0
chr10	20608888	.	GAC	G	1854.68	PASS	AB=0.878;AC=19;AF=0.352;AN=54;BaseQRankSum=4.576;DP=1066;FS=22.679;HRun=0;HaplotypeScore=160.2923;InbreedingCoeff=-0.2908;MQ=31.89;MQ0=97;MQRankSum=1.350;QD=2.46;ReadPosRankSum=6.639;VQSLOD=0.5355;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:45,11:43:47.37:114,0,47	0/0:16,0:12:3.01:0,3,51	./.	0/0:34,0:4:9.01:0,9,117	0/0:26,0:21:24.07:0,24,362	0/0:21,4:19:3.84:0,4,14	0/1:63,12:58:99:126,0,143	0/1:68,5:22:65.84:177,0,66	1/1:37,9:37:7.39:232,7,0	0/0:57,0:46:77.75:0,78,970	0/0:12,0:12:13.94:0,14,237	0/1:38,4:34:51.05:51,0,52	0/1:37,2:29:60.04:60,0,182	1/1:29,7:31:20.64:265,21,0	0/0:64,0:49:63.17:0,63,964	0/1:16,1:17:28.45:36,0,28	0/0:29,0:28:15.97:0,16,169	0/1:13,0:12:12.33:12,0,30	0/1:35,0:12:21.94:22,0,115	0/1:19,4:21:38.05:47,0,38	0/1:98,7:68:99:111,0,102	0/1:20,10:24:14.76:67,0,15	0/0:11,5:11:5.99:0,6,48	0/1:51,13:49:57.95:162,0,58	0/1:19,10:24:36.87:95,0,37	0/1:30,10:26:49.22:290,0,49	0/1:17,6:20:23.26:147,0,23	0/0:7,0:6:5.33:0,5,27
chr10	20608892	.	C	CAT	1104.03	PASS	AB=0.953;AC=19;AF=0.352;AN=54;BaseQRankSum=-1.483;DP=1103;FS=0.591;HRun=0;HaplotypeScore=167.8806;InbreedingCoeff=-0.2611;MQ=31.73;MQ0=111;MQRankSum=0.416;QD=1.64;ReadPosRankSum=-2.349;VQSLOD=2.3823;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:55,2:43:99:139,0,100	0/0:18,0:12:3.48:0,3,47	./.	0/0:32,0:3:9.03:0,9,133	0/0:25,0:20:29.97:0,30,376	1/1:24,0:19:3.72:58,4,0	0/0:59,17:64:28.91:0,29,248	0/1:71,3:17:79.82:161,0,80	0/0:47,0:40:6.57:0,7,83	0/0:57,0:47:99:0,111,1259	0/0:13,0:13:18.02:0,18,249	0/1:39,0:34:44.96:65,0,45	0/1:38,2:33:16.99:17,0,216	0/0:32,1:32:21.03:0,21,96	0/0:66,0:49:66.19:0,66,962	0/1:24,0:20:6.83:66,0,7	0/1:31,0:28:11.64:12,0,182	0/1:13,0:11:34.28:34,0,61	0/1:42,0:12:50.61:51,0,76	0/1:22,1:21:58.99:95,0,59	0/1:105,0:70:99:107,0,167	0/1:29,1:24:2.45:2,0,36	0/1:19,0:15:12.33:12,0,49	0/1:61,0:49:99:171,0,107	0/1:24,1:24:34.14:34,0,139	0/1:36,0:21:89.94:131,0,90	0/0:21,0:19:23.28:0,23,150	1/1:4,3:7:6.02:107,6,0
chr10	20608998	.	TAC	T	464.83	PASS	AB=0.959;AC=8;AF=0.143;AN=56;BaseQRankSum=1.819;DP=873;FS=0.000;HRun=0;HaplotypeScore=201.3571;InbreedingCoeff=0.3640;MQ=38.33;MQ0=45;MQRankSum=-2.291;QD=3.21;ReadPosRankSum=-1.754;VQSLOD=2.2896;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:46,0:35:10.73:11,0,266	0/1:10,0:7:0:0,0,0	0/0:33,0:8:18.05:0,18,259	0/0:43,0:6:14.88:0,15,135	0/0:17,0:13:2.62:0,3,44	0/0:16,0:15:3.01:0,3,49	0/0:42,1:34:42.10:0,42,601	0/0:57,1:41:87.02:0,87,1230	0/0:40,1:35:40.37:0,40,582	0/0:45,1:35:55.72:0,56,656	0/0:17,0:15:9.03:0,9,151	0/0:33,0:31:20.72:0,21,239	0/0:26,1:24:31.82:0,32,434	0/0:37,0:34:30.55:0,31,395	0/0:30,0:26:18.12:0,18,424	1/1:16,10:25:11.83:155,12,0	1/1:16,5:18:24.96:307,25,0	0/1:16,1:16:93.12:98,0,93	0/1:22,3:5:29.10:29,0,63	0/0:22,0:20:26.71:0,27,438	0/0:90,1:71:57.21:0,57,867	0/0:30,0:25:27.07:0,27,426	0/0:21,0:20:5.27:0,5,100	0/0:52,0:46:30.05:0,30,454	0/0:21,0:19:6.02:0,6,83	0/0:34,0:29:66.05:0,66,896	0/0:9,0:9:12.04:0,12,179	0/0:3,0:2:3.01:0,3,49
chr10	20609008	.	T	TAC	1110.89	PASS	AB=0.955;AC=21;AF=0.375;AN=56;BaseQRankSum=-0.595;DP=713;FS=12.759;HRun=0;HaplotypeScore=160.7612;InbreedingCoeff=-0.2823;MQ=44.71;MQ0=39;MQRankSum=0.897;QD=2.38;ReadPosRankSum=-1.339;VQSLOD=1.3206;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:36,2:29:47.84:64,0,48	0/0:10,0:7:0:0,0,0	0/0:29,0:10:1.27:0,1,81	0/0:46,0:14:15.63:0,16,99	0/1:14,0:10:0:1,0,0	1/1:10,2:12:3.01:47,3,0	0/1:33,2:26:75.69:76,0,134	0/1:29,9:26:99:258,0,134	0/0:34,1:30:0.06:0,0,244	0/1:37,1:29:5.35:5,0,230	0/0:15,0:13:5.78:0,6,77	0/0:26,2:27:0.75:0,1,2	0/1:22,1:20:74.38:74,0,109	0/1:30,0:27:96.42:108,0,96	0/0:26,1:23:12.85:0,13,247	0/0:21,0:20:6.81:0,7,65	0/0:16,0:14:15.05:0,15,179	0/0:16,0:15:7.53:0,8,80	0/1:20,1:4:23.03:41,0,23	0/1:17,0:15:21.71:22,0,137	0/1:74,0:58:99:153,0,243	0/1:22,2:21:98.31:124,0,98	0/1:16,1:16:32.58:41,0,33	0/1:32,5:32:56.59:57,0,68	1/1:14,0:12:0.29:33,0,0	0/1:25,0:22:88.68:89,0,136	0/1:6,0:6:8.50:9,0,39	1/1:0,1:1:3.01:51,3,0
chr10	20627837	.	GA	G	6165.93	PASS	AB=0.780;AC=34;AF=0.607;AN=56;BaseQRankSum=12.971;DP=520;FS=1.597;HRun=10;HaplotypeScore=81.4749;InbreedingCoeff=0.8496;MQ=78.80;MQ0=0;MQRankSum=-0.743;QD=19.64;ReadPosRankSum=2.062;VQSLOD=5.6839;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,10:11:23.99:208,24,0	0/0:7,0:7:18.05:0,18,199	0/0:18,0:17:7.29:0,7,191	0/1:11,0:10:18.17:18,0,52	0/0:25,0:26:75.05:0,75,796	1/1:2,20:22:47.93:416,48,0	1/1:0,11:11:26.99:234,27,0	1/1:6,24:30:71.90:609,72,0	1/1:2,16:18:44.99:391,45,0	0/0:36,0:36:90.22:0,90,979	0/0:21,0:22:53.98:0,54,578	1/1:3,14:17:44.99:390,45,0	1/1:3,16:19:41.97:365,42,0	1/1:0,14:14:38.99:339,39,0	0/0:21,0:21:57.15:0,57,623	0/0:17,0:17:48.09:0,48,507	0/0:31,1:32:61.15:0,61,890	0/0:13,0:13:33.07:0,33,355	0/0:13,0:13:33.09:0,33,365	1/1:5,19:24:56.94:487,57,0	1/1:0,9:9:18:156,18,0	1/1:2,18:20:47.95:410,48,0	1/1:4,21:25:59.98:521,60,0	1/1:2,10:12:29.99:260,30,0	1/1:2,14:16:35.98:313,36,0	0/1:5,18:23:6.42:399,0,6	1/1:4,17:21:47.98:416,48,0	1/1:2,9:11:26.99:234,27,0
chr10	20627995	.	G	GCT	239.21	PASS	AB=0.838;AC=3;AF=0.054;AN=56;BaseQRankSum=-1.510;DP=494;FS=9.209;HRun=0;HaplotypeScore=73.8117;InbreedingCoeff=-0.0530;MQ=79.59;MQ0=10;MQRankSum=1.281;QD=4.88;ReadPosRankSum=-1.911;VQSLOD=1.3120;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:57.17:0,57,691	0/0:5,0:5:12.04:0,12,146	0/0:36,0:21:7.74:0,8,90	0/0:34,0:24:7.07:0,7,173	0/0:16,0:16:24.45:0,24,355	0/0:17,0:17:35.47:0,35,408	0/0:22,0:23:53.98:0,54,619	0/0:17,0:16:36.09:0,36,415	0/0:9,0:10:23.87:0,24,253	0/1:14,1:15:9.32:9,0,397	0/1:18,1:19:3.29:3,0,453	0/0:12,0:13:38.93:0,39,436	0/0:14,0:13:36.11:0,36,437	0/0:14,0:14:39.12:0,39,472	0/0:19,0:19:45.14:0,45,546	0/0:14,0:14:27.08:0,27,327	0/0:22,0:23:44.93:0,45,522	0/0:7,0:7:18.06:0,18,218	0/0:18,0:18:30.07:0,30,340	0/0:19,0:19:38.96:0,39,455	0/0:16,0:16:33.04:0,33,389	0/0:12,0:12:23.99:0,24,272	0/1:5,9:15:23.42:312,0,23	0/0:12,0:12:27.08:0,27,328	0/0:19,0:19:39.11:0,39,461	0/0:17,0:17:42.11:0,42,489	0/0:24,0:24:54.02:0,54,642	0/0:12,0:13:38.90:0,39,421
chr10	20628021	.	TC	T	1168.18	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=5.333;DP=527;FS=1.186;HRun=8;HaplotypeScore=62.8529;InbreedingCoeff=0.9686;MQ=71.15;MQ0=16;MQRankSum=-0.725;QD=18.25;ReadPosRankSum=1.157;VQSLOD=3.5761;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:60.18:0,60,721	0/0:6,0:6:14.53:0,15,151	0/0:40,0:17:8.42:0,8,185	0/0:41,0:25:30.94:0,31,375	0/0:15,0:15:36.07:0,36,408	0/0:14,1:14:30.08:0,30,350	0/0:28,0:28:78.24:0,78,941	0/0:20,0:18:21.75:0,22,256	0/0:11,0:11:30.06:0,30,338	0/0:18,0:18:42.13:0,42,507	0/0:17,0:18:50.97:0,51,576	0/0:16,0:16:36.11:0,36,435	0/0:15,1:15:16.38:0,16,478	0/0:18,0:18:45.13:0,45,532	0/0:23,0:23:66.19:0,66,779	1/1:2,16:18:36.06:348,36,0	1/1:3,17:20:39.05:376,39,0	1/1:2,8:10:21.03:203,21,0	1/1:1,15:16:42.06:401,42,0	0/0:18,0:17:30.09:0,30,362	0/0:15,0:15:36.11:0,36,432	0/0:11,0:11:23.98:0,24,258	0/0:16,0:16:45.13:0,45,533	0/0:17,0:17:51.16:0,51,615	0/0:18,1:19:19.17:0,19,514	0/0:18,0:18:42.12:0,42,497	0/0:22,0:22:57.16:0,57,676	0/0:13,0:12:26.84:0,27,275
chr10	20628618	.	TA	T	4700.70	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=12.731;DP=487;FS=0.389;HRun=12;HaplotypeScore=76.9012;InbreedingCoeff=0.9153;MQ=76.95;MQ0=1;MQRankSum=1.189;QD=16.04;ReadPosRankSum=3.882;VQSLOD=5.7723;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,25:36:77.51:569,78,0	0/0:10,1:11:3.79:0,4,209	0/0:17,0:13:4.07:0,4,56	0/0:11,0:11:14.08:0,14,97	0/0:18,0:18:50.97:0,51,493	1/1:3,13:16:29.88:232,30,0	1/1:2,15:17:17.38:318,17,0	1/1:8,14:22:34.34:259,34,0	1/1:2,14:17:34.91:261,35,0	0/0:22,1:25:45.73:0,46,620	0/0:21,0:21:48.05:0,48,468	1/1:2,10:13:28.93:215,29,0	1/1:0,12:13:34.91:261,35,0	1/1:4,10:16:33.93:244,34,0	0/0:12,1:14:10.12:0,10,259	0/0:15,0:15:39.08:0,39,396	0/0:28,1:29:42.86:0,43,601	0/0:7,0:7:18.04:0,18,183	0/0:21,0:24:62.86:0,63,591	1/1:8,14:22:35.79:278,36,0	1/1:1,9:10:26.90:209,27,0	1/1:0,16:16:32.84:255,33,0	1/1:1,12:13:2.30:201,2,0	1/1:2,11:13:32.87:255,33,0	1/1:2,16:19:43.87:331,44,0	1/1:2,13:15:35.84:279,36,0	1/1:5,22:27:26.33:387,26,0	1/1:1,6:8:19.96:145,20,0
chr10	20628737	.	G	GGA	6941.66	PASS	AB=0.735;AC=33;AF=0.589;AN=56;BaseQRankSum=-7.674;DP=596;FS=1.035;HRun=0;HaplotypeScore=73.6131;InbreedingCoeff=0.0657;MQ=62.11;MQ0=11;MQRankSum=1.194;QD=14.74;ReadPosRankSum=3.716;VQSLOD=4.7680;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:16,11:28:32.98:582,33,0	0/0:7,0:7:12.03:0,12,131	0/1:31,0:15:5.03:5,0,58	0/0:47,0:13:5.99:0,6,53	0/0:26,0:26:44.85:0,45,499	0/1:13,10:22:42.85:302,0,43	0/1:8,9:17:43.58:97,0,44	0/1:28,0:28:35.23:250,0,35	0/1:9,6:15:67.37:255,0,67	0/0:27,0:27:44.97:0,45,498	0/1:21,1:24:10.14:10,0,317	0/1:2,12:14:7.90:349,0,8	1/1:7,11:19:27.09:423,27,0	0/1:7,8:15:37.24:334,0,37	0/0:18,0:18:33.10:0,33,382	1/1:5,9:15:24.08:362,24,0	0/1:7,15:24:0.59:479,0,1	1/1:5,12:18:18.06:268,18,0	1/1:4,8:13:12.90:300,13,0	1/1:9,7:16:9.03:141,9,0	0/1:12,9:21:40.05:387,0,40	1/1:6,9:15:6.02:78,6,0	0/1:13,7:20:15.92:160,0,16	1/1:10,11:20:21.07:329,21,0	1/1:2,19:22:27.09:423,27,0	0/1:8,21:29:11.71:711,0,12	1/1:4,18:23:35.79:523,36,0	0/1:12,6:17:19.94:173,0,20
chr10	20631117	.	TA	T	1094.98	PASS	AB=0.870;AC=35;AF=0.625;AN=56;BaseQRankSum=-0.007;DP=282;FS=4.738;HRun=15;HaplotypeScore=33.9753;InbreedingCoeff=0.4889;MQ=51.46;MQ0=12;MQRankSum=1.744;QD=6.02;ReadPosRankSum=2.090;VQSLOD=1.6632;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:11,19:28:34.70:218,35,0	1/1:1,0:1:2.92:17,3,0	0/0:11,0:1:3:0,3,29	0/0:4,0:2:2.97:0,3,20	0/0:18,0:16:18:0,18,158	0/1:7,7:13:26.05:108,0,26	1/1:3,2:4:7.95:44,8,0	1/1:13,13:21:21.50:233,22,0	1/1:5,1:3:2.96:19,3,0	0/0:13,0:12:11.99:0,12,104	0/1:5,0:4:9.12:9,0,37	1/1:5,1:5:2.91:19,3,0	0/0:2,0:2:0:0,0,0	1/1:1,3:4:8.87:58,9,0	0/0:6,0:5:9:0,9,79	0/0:3,0:3:5.91:0,6,38	0/0:21,0:23:35.77:0,36,293	0/1:15,1:17:20.04:20,0,117	0/0:18,0:15:26.84:0,27,225	1/1:2,4:7:10.14:62,10,0	1/1:1,5:8:12.93:69,13,0	1/1:0,4:4:8.87:58,9,0	1/1:1,3:4:2.93:19,3,0	1/1:2,2:3:5.91:38,6,0	1/1:3,9:13:19.76:121,20,0	1/1:5,3:7:8.79:58,9,0	1/1:6,5:10:14.75:96,15,0	1/1:5,1:5:2.02:6,2,0
chr10	20631225	.	GA	G	4554.66	PASS	AB=0.933;AC=35;AF=0.625;AN=56;BaseQRankSum=4.710;DP=411;FS=9.057;HRun=10;HaplotypeScore=53.7357;InbreedingCoeff=0.8680;MQ=63.14;MQ0=6;MQRankSum=0.856;QD=16.27;ReadPosRankSum=3.136;VQSLOD=4.7854;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,25:28:47.97:417,48,0	0/0:3,0:3:6.02:0,6,66	0/0:3,0:1:0:0,0,0	0/1:13,1:10:12.95:13,0,138	0/0:13,0:13:33.09:0,33,365	1/1:1,18:18:41.99:365,42,0	1/1:3,12:15:23.97:208,24,0	1/1:4,26:29:76.18:663,76,0	1/1:1,7:8:11.99:104,12,0	0/0:19,0:17:39.11:0,39,431	0/0:7,0:7:12.03:0,12,133	1/1:3,12:15:23.99:208,24,0	1/1:3,13:16:29.97:260,30,0	1/1:4,12:16:23.99:208,24,0	0/0:10,0:9:30.08:0,30,332	0/0:12,0:12:30.08:0,30,332	0/0:24,0:23:63.17:0,63,697	0/0:21,0:21:51.14:0,51,563	0/0:19,0:18:51.13:0,51,555	1/1:4,18:22:44.98:390,45,0	1/1:2,15:17:38.99:339,39,0	1/1:6,9:14:26.99:234,27,0	1/1:2,7:9:21:182,21,0	1/1:1,13:14:26.98:234,27,0	1/1:2,6:7:15:130,15,0	1/1:1,11:12:32.99:286,33,0	1/1:0,11:11:17.85:156,18,0	1/1:1,9:9:18:156,18,0
chr10	20633085	.	AT	A	8857.07	PASS	AB=0.944;AC=43;AF=0.768;AN=56;BaseQRankSum=9.672;DP=579;FS=0.000;HRun=10;HaplotypeScore=87.6151;InbreedingCoeff=0.8969;MQ=82.07;MQ0=0;MQRankSum=-1.526;QD=19.09;ReadPosRankSum=1.990;VQSLOD=5.4619;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,33:39:83.95:729,84,0	0/0:11,0:11:33.06:0,33,353	0/0:17,0:16:23.83:0,24,279	0/1:16,1:16:20.14:20,0,35	0/0:27,0:27:66.17:0,66,721	1/1:3,23:26:56.98:495,57,0	1/1:1,18:19:32.99:287,33,0	1/1:6,25:31:74.38:625,74,0	1/1:1,19:20:44.99:391,45,0	0/0:19,0:19:51.14:0,51,564	0/0:21,0:21:54.14:0,54,590	1/1:3,10:13:29.99:260,30,0	1/1:1,17:18:47.99:417,48,0	1/1:2,11:13:29.99:260,30,0	0/0:19,0:19:54.11:0,54,585	1/1:3,21:24:59.96:521,60,0	1/1:1,21:22:56.99:495,57,0	1/1:1,20:21:44.99:391,45,0	1/1:1,14:17:46.06:376,46,0	1/1:6,17:23:44.96:391,45,0	1/1:3,18:21:44.99:391,45,0	1/1:2,15:17:41.99:365,42,0	1/1:3,22:25:27.12:461,27,0	1/1:3,19:22:17.81:383,18,0	1/1:5,16:21:44.91:382,45,0	1/1:4,16:20:50.95:438,51,0	1/1:3,23:26:71.98:624,72,0	1/1:3,6:9:17.99:156,18,0
chr10	20633249	.	A	ATT	4067.89	PASS	AB=0.567;AC=40;AF=0.714;AN=56;BaseQRankSum=5.212;DP=558;FS=6.191;HRun=12;HaplotypeScore=80.3321;InbreedingCoeff=0.7445;MQ=74.44;MQ0=0;MQRankSum=0.484;QD=9.46;ReadPosRankSum=1.845;VQSLOD=1.9218;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,1:41:43.54:239,44,0	0/0:16,0:16:23.64:0,24,293	0/0:13,0:13:15.30:0,15,104	0/0:11,0:9:13.27:0,13,84	0/0:31,0:31:71.84:0,72,673	1/1:1,0:17:32.79:122,33,0	1/1:3,0:17:29.94:104,30,0	1/1:6,0:24:44.14:154,44,0	0/1:6,0:22:5.47:46,0,5	0/0:21,0:21:41.93:0,42,385	0/0:20,0:20:41.13:0,41,402	1/1:4,0:13:1.82:36,2,0	1/1:3,0:18:25.14:89,25,0	1/1:5,0:21:32.32:112,32,0	0/0:14,0:15:41.77:0,42,373	1/1:5,12:17:24.08:337,24,0	1/1:3,23:28:62.70:850,63,0	1/1:3,16:21:45.15:631,45,0	1/1:7,10:20:36.08:457,36,0	1/1:4,0:23:31.94:115,32,0	1/1:4,0:21:12.84:102,13,0	0/1:4,0:20:15.84:76,0,16	1/1:1,0:16:25.77:119,26,0	1/1:6,0:21:39.80:138,40,0	1/1:6,0:20:0.24:59,0,0	1/1:4,0:18:6.44:83,6,0	1/1:5,0:24:30.38:123,30,0	1/1:2,1:8:12.99:77,13,0
chr10	20636174	.	TA	T	4622.19	PASS	AB=0.860;AC=35;AF=0.625;AN=56;BaseQRankSum=4.829;DP=512;FS=0.396;HRun=12;HaplotypeScore=61.0860;InbreedingCoeff=0.7997;MQ=70.91;MQ0=1;MQRankSum=-0.484;QD=13.59;ReadPosRankSum=2.686;VQSLOD=5.2394;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,25:28:59.70:459,60,0	0/0:7,0:7:15.03:0,15,152	0/1:31,0:17:15.89:16,0,128	0/1:17,0:10:0.90:1,0,73	0/0:24,1:25:60.01:0,60,581	1/1:2,28:30:74.69:580,75,0	1/1:3,9:12:14.93:116,15,0	1/1:10,15:26:40.74:300,41,0	1/1:3,9:12:17.91:139,18,0	0/0:23,2:26:36.71:0,37,527	0/0:25,0:26:65.94:0,66,642	1/1:1,11:12:26.89:209,27,0	0/1:3,8:11:12.07:58,0,12	1/1:1,5:6:14.94:116,15,0	0/0:12,0:12:27.04:0,27,268	0/0:16,0:16:30.05:0,30,298	0/0:25,0:25:30.87:0,31,466	0/0:12,1:13:22.77:0,23,349	0/0:21,0:22:45.48:0,45,479	1/1:8,28:36:80.64:627,81,0	1/1:1,7:8:17.93:139,18,0	1/1:1,6:7:14.89:111,15,0	1/1:6,6:12:20.90:162,21,0	1/1:3,10:13:26.89:209,27,0	1/1:0,20:20:56.78:441,57,0	1/1:3,19:22:56.44:429,56,0	1/1:7,17:23:44.57:348,45,0	1/1:4,7:11:20.87:162,21,0
chr10	20637352	.	CTCTCTTTGTG	C	875.04	PASS	AB=0.992;AC=10;AF=0.179;AN=56;BaseQRankSum=6.575;DP=502;FS=0.000;HRun=0;HaplotypeScore=139.3309;InbreedingCoeff=0.7205;MQ=61.53;MQ0=7;MQRankSum=-2.238;QD=7.95;ReadPosRankSum=-0.832;VQSLOD=2.3746;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:69.24:0,69,2238	0/0:4,0:4:9.03:0,9,191	0/0:27,0:10:22.83:0,23,281	0/1:59,0:20:2.78:3,0,490	0/0:10,0:10:24.08:0,24,675	0/0:17,0:15:45.15:0,45,1391	0/0:28,0:28:66.23:0,66,1952	0/0:28,0:27:76.14:0,76,2022	0/0:11,0:11:33.11:0,33,1072	0/0:20,0:20:54.18:0,54,1597	0/0:13,0:13:33.11:0,33,999	0/0:15,0:15:37.68:0,38,1200	0/0:20,0:19:44.94:0,45,1382	0/0:10,0:9:18.05:0,18,504	0/0:18,0:16:36.10:0,36,985	1/1:9,0:8:5.94:142,6,0	1/1:6,0:6:12.04:213,12,0	1/1:8,0:8:3.01:76,3,0	1/1:2,9:11:29.13:581,29,0	0/0:12,0:12:33.11:0,33,849	0/0:30,0:29:75.21:0,75,2160	0/0:20,0:20:47.17:0,47,1251	0/0:12,0:12:33.11:0,33,1034	0/0:25,0:24:57.15:0,57,1677	0/0:12,0:12:27.09:0,27,898	0/0:22,0:22:19.31:0,19,1628	0/0:9,0:9:25.33:0,25,694	0/1:16,0:15:3.40:3,0,880
chr10	20637356	.	CTTTG	C	621.63	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=7.206;DP=505;FS=1.952;HRun=0;HaplotypeScore=97.5786;InbreedingCoeff=0.7866;MQ=59.99;MQ0=6;MQRankSum=-1.676;QD=13.23;ReadPosRankSum=-0.801;VQSLOD=3.3001;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:69.24:0,69,1923	0/0:5,0:5:9.03:0,9,213	0/0:29,0:12:27.79:0,28,391	0/0:59,1:21:20.94:0,21,600	0/0:11,0:11:27.09:0,27,676	0/0:17,0:15:45.15:0,45,1240	0/0:26,0:26:66.23:0,66,1816	0/0:29,0:28:81.28:0,81,2098	0/0:11,0:11:33.11:0,33,922	0/0:18,0:18:54.18:0,54,1408	0/0:16,0:16:39.13:0,39,1000	0/0:17,0:17:40.38:0,40,1018	0/0:18,0:17:44.94:0,45,1140	0/0:10,0:10:21.06:0,21,482	0/0:18,0:16:36.10:0,36,845	1/1:1,8:8:5.94:108,6,0	1/1:1,3:5:11.97:148,12,0	1/1:1,7:8:3.01:56,3,0	1/1:9,1:10:29.42:447,29,0	0/0:13,0:13:36.12:0,36,915	0/0:29,0:28:76.77:0,77,1949	0/0:21,0:21:48.99:0,49,1210	0/0:11,0:11:33.11:0,33,913	0/0:24,0:23:57.15:0,57,1472	0/0:12,0:12:27.09:0,27,755	0/0:21,0:21:54.65:0,55,1372	0/0:12,0:12:24.87:0,25,651	0/1:15,0:14:5.42:5,0,863
chr10	20640180	.	CA	C	2340.37	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=4.827;DP=482;FS=2.351;HRun=1;HaplotypeScore=57.1305;InbreedingCoeff=0.9725;MQ=62.46;MQ0=6;MQRankSum=1.692;QD=33.43;ReadPosRankSum=0.787;VQSLOD=3.3655;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:81.23:0,81,1224	0/0:5,0:5:12.04:0,12,190	0/0:16,0:13:23.54:0,24,441	0/0:14,0:12:11.96:0,12,380	0/0:20,0:20:54.17:0,54,837	0/0:10,0:10:30.10:0,30,479	0/0:23,0:23:63.17:0,63,974	0/0:26,0:26:72.22:0,72,1058	0/0:16,0:16:42.13:0,42,647	0/0:21,0:20:60.20:0,60,940	0/0:14,0:13:33.11:0,33,526	0/0:12,0:12:36.12:0,36,574	0/0:14,0:14:42.13:0,42,648	0/0:14,0:14:42.14:0,42,667	0/0:16,0:16:48.15:0,48,743	1/1:0,8:8:21.07:293,21,0	1/1:0,31:29:78.26:1089,78,0	1/1:0,16:16:39.13:543,39,0	1/1:0,15:15:44.87:576,45,0	0/0:19,0:19:51.16:0,51,780	0/0:24,0:24:69.21:0,69,1077	0/0:18,0:18:48.16:0,48,766	0/0:19,0:19:54.17:0,54,830	0/0:29,0:29:81.26:0,81,1261	0/0:16,0:16:45.14:0,45,695	0/0:19,0:19:54.16:0,54,820	0/0:14,0:14:42.13:0,42,638	0/0:5,0:4:12.04:0,12,191
chr10	20640267	.	AC	A	3118.65	PASS	AB=1.000;AC=46;AF=0.821;AN=56;BaseQRankSum=3.032;DP=421;FS=17.217;HRun=2;HaplotypeScore=67.2489;InbreedingCoeff=0.4760;MQ=46.90;MQ0=29;MQRankSum=2.308;QD=8.50;ReadPosRankSum=0.265;VQSLOD=-0.3333;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:28:54.52:300,55,0	1/1:8,2:9:16.31:153,16,0	0/0:22,0:3:5.60:0,6,28	0/1:15,0:8:0.13:0,0,65	1/1:3,11:15:16.82:111,17,0	1/1:9,0:10:17.50:96,18,0	1/1:18,0:16:35:202,35,0	1/1:21,1:23:44.97:250,45,0	1/1:10,0:11:16.63:95,17,0	1/1:5,13:20:49:381,49,0	1/1:9,0:9:25.95:182,26,0	1/1:12,0:14:25.21:156,25,0	1/1:9,0:7:14.59:87,15,0	1/1:10,0:10:16.59:85,17,0	0/1:8,0:8:12.31:12,0,84	0/0:11,0:11:1.92:0,2,172	0/1:18,0:14:18.81:19,0,85	0/1:22,0:18:47.32:47,0,135	0/0:21,0:18:27.25:0,27,298	1/1:15,0:16:28.78:173,29,0	1/1:7,0:7:10.38:49,10,0	1/1:6,0:7:13.25:80,13,0	1/1:13,0:14:19.44:124,19,0	1/1:15,0:15:23.28:160,23,0	1/1:10,0:10:22.68:150,23,0	1/1:18,0:19:39.47:207,39,0	1/1:19,0:17:28.95:153,29,0	1/1:9,0:3:0.47:1,0,0
chr10	20640489	.	G	GAAAAAAAAA	7884.67	PASS	AB=0.977;AC=48;AF=0.857;AN=56;BaseQRankSum=0.984;DP=371;FS=7.413;HRun=13;HaplotypeScore=104.6188;InbreedingCoeff=0.3748;MQ=46.93;MQ0=8;MQRankSum=-3.896;QD=23.12;ReadPosRankSum=-0.670;VQSLOD=1.4636;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:29:36.59:1052,37,0	1/1:5,0:5:6.02:103,6,0	0/0:7,0:5:5.81:0,6,105	0/0:8,0:5:5.63:0,6,98	1/1:17,0:16:23.84:517,24,0	1/1:9,0:9:9.03:301,9,0	1/1:10,0:10:20.94:501,21,0	1/1:19,0:18:7.95:209,8,0	1/1:7,0:7:6.02:248,6,0	1/1:11,0:11:12.04:200,12,0	1/1:8,0:8:3.01:52,3,0	1/1:8,0:9:15.05:549,15,0	1/1:6,0:6:6.02:248,6,0	1/1:12,1:13:12.04:493,12,0	0/0:14,0:13:29.77:0,30,623	1/1:16,0:17:16.09:278,16,0	0/1:21,0:21:46.27:201,0,46	1/1:21,0:21:34.55:367,35,0	0/1:20,0:20:90.18:188,0,90	1/1:10,0:10:3.48:119,3,0	1/1:11,0:8:10.83:151,11,0	1/1:7,0:6:6:75,6,0	1/1:7,0:7:3.01:93,3,0	1/1:11,7:21:12.04:329,12,0	1/1:12,0:11:5.69:102,6,0	1/1:20,0:20:32.98:793,33,0	1/1:13,2:16:20.75:627,21,0	1/1:6,0:5:3.01:92,3,0
chr10	20640499	.	A	AG	1347.23	PASS	AB=0.629;AC=35;AF=0.625;AN=56;BaseQRankSum=2.169;DP=468;FS=3.114;HRun=0;HaplotypeScore=75.2433;InbreedingCoeff=-0.1578;MQ=50.84;MQ0=4;MQRankSum=1.162;QD=3.14;ReadPosRankSum=3.973;VQSLOD=2.6639;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:11,0:37:62.21:79,0,62	1/1:1,0:3:5.67:27,6,0	0/0:9,0:8:17.47:0,17,120	0/0:15,0:9:6.99:0,7,89	0/1:16,0:18:38.22:75,0,38	1/1:1,0:15:8.38:39,8,0	0/1:6,7:13:17.45:17,0,70	0/1:16,20:34:99:300,0,114	1/1:1,0:12:1.89:12,2,0	0/1:1,0:17:20.71:21,0,45	1/1:2,0:10:7.86:42,8,0	0/1:6,0:11:1.40:1,0,35	0/1:3,0:15:1.20:8,0,1	1/1:2,0:17:4.82:27,5,0	0/0:15,0:15:42.11:0,42,525	1/1:2,1:16:4.45:96,4,0	0/1:8,1:32:89.96:90,0,100	1/1:6,0:25:1.97:117,2,0	0/1:7,2:28:99:338,0,122	0/1:3,0:18:19.55:20,0,35	0/1:8,0:5:0.37:0,0,31	0/1:3,0:11:12.33:27,0,12	1/1:1,0:8:2.79:13,3,0	1/1:17,0:17:9.55:57,10,0	0/1:2,0:14:7.70:8,0,14	0/1:5,1:17:65.47:65,0,78	0/1:7,0:18:7.96:8,0,63	1/1:1,0:4:2.80:13,3,0
chr10	20640807	.	AAAAAAC	A	6438.93	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=9.249;DP=489;FS=6.538;HRun=0;HaplotypeScore=101.9631;InbreedingCoeff=0.8973;MQ=47.87;MQ0=11;MQRankSum=-9.347;QD=18.88;ReadPosRankSum=0.192;VQSLOD=3.9333;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:14,13:27:26.94:462,27,0	1/1:1,4:5:8.96:117,9,0	0/0:25,0:8:6.02:0,6,127	0/0:26,0:6:7.27:0,7,174	1/1:7,12:16:13.84:132,14,0	1/1:3,12:15:27.02:499,27,0	1/1:11,7:18:20.94:341,21,0	1/1:18,1:19:11.98:135,12,0	1/1:7,9:16:14.85:177,15,0	1/1:4,9:13:21.06:371,21,0	1/1:1,12:13:17.85:237,18,0	1/1:6,8:13:23.61:445,24,0	1/1:6,5:11:15.05:305,15,0	1/1:6,13:19:32.91:542,33,0	0/0:12,0:11:15.05:0,15,446	0/0:17,0:17:30.09:0,30,900	0/0:34,0:34:63.22:0,63,1944	0/0:18,0:18:36.11:0,36,1059	0/0:16,0:16:21.04:0,21,556	1/1:6,12:18:26.82:339,27,0	1/1:14,10:23:11.28:171,11,0	1/1:5,11:15:20.74:256,21,0	1/1:3,9:12:20.67:172,21,0	1/1:12,3:15:5.95:79,6,0	1/1:9,7:15:17.91:280,18,0	1/1:9,6:15:18.06:366,18,0	1/1:12,19:31:44.55:814,45,0	1/1:0,5:5:11.99:202,12,0
chr10	20641552	.	AGTGT	A	1864.70	PASS	AC=38;AF=0.760;AN=50;BaseQRankSum=0.005;DP=539;FS=0.000;HRun=0;HaplotypeScore=98.5192;InbreedingCoeff=0.6034;MQ=65.43;MQ0=15;MQRankSum=-0.382;QD=5.47;ReadPosRankSum=-0.281;VQSLOD=1.7486;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:21,3:24:3.01:46,3,0	1/1:2,0:3:3:28,3,0	./.	./.	1/1:12,0:18:8.97:76,9,0	1/1:19,6:26:9.02:120,9,0	1/1:11,2:14:9.02:118,9,0	0/0:17,0:17:0:0,0,0	1/1:10,4:14:6.49:93,6,0	1/1:18,0:25:10.57:87,11,0	1/1:8,0:13:8.74:83,9,0	1/1:13,5:19:17.79:258,18,0	1/1:9,4:12:2.74:46,3,0	1/1:13,0:14:6.01:56,6,0	0/0:10,0:13:5.96:0,6,25	0/0:13,0:18:30.10:0,30,522	0/0:21,0:24:33.10:0,33,594	0/0:9,0:17:14.97:0,15,205	0/0:14,0:12:9.08:0,9,125	1/1:9,3:12:3.01:46,3,0	1/1:32,2:34:3.01:46,3,0	1/1:11,6:17:5.78:74,6,0	1/1:13,6:19:9.03:139,9,0	1/1:20,9:29:12.04:183,12,0	./.	1/1:14,4:16:9.03:139,9,0	1/1:12,6:20:20.72:287,21,0	1/1:8,1:9:6.02:93,6,0
chr10	20642556	.	T	TTTTGTTTG	12770.87	PASS	AB=0.742;AC=38;AF=0.679;AN=56;BaseQRankSum=-1.201;DP=753;FS=1.261;HRun=0;HaplotypeScore=165.3708;InbreedingCoeff=0.6006;MQ=56.59;MQ0=12;MQRankSum=-2.753;QD=22.85;ReadPosRankSum=-1.021;VQSLOD=4.2740;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,26:43:15.05:464,15,0	0/1:7,0:10:24.95:25,0,339	0/0:45,0:24:8.70:0,9,404	0/0:38,0:17:20.51:0,21,240	0/1:24,0:44:99:215,0,981	1/1:3,15:20:12.04:501,12,0	1/1:27,0:27:36.12:945,36,0	1/1:24,0:19:36.07:466,36,0	1/1:4,18:23:18.06:746,18,0	0/1:30,0:43:99:217,0,1078	0/1:25,0:38:99:187,0,940	1/1:5,13:20:15.05:593,15,0	1/1:5,12:18:9.03:372,9,0	1/1:9,15:25:12.04:405,12,0	0/0:17,0:17:45.15:0,45,1120	0/0:21,0:21:54.17:0,54,1140	0/0:27,0:27:57.16:0,57,1232	0/0:25,0:25:66.11:0,66,1400	0/0:21,0:20:24:0,24,381	1/1:4,20:25:45.15:1279,45,0	1/1:28,0:27:33.11:885,33,0	1/1:7,14:24:27.09:774,27,0	1/1:9,14:25:9.92:316,10,0	1/1:36,0:36:31.44:1663,31,0	1/1:6,18:24:9.03:362,9,0	1/1:8,17:26:54.19:1493,54,0	1/1:4,17:24:24.49:806,24,0	1/1:6,0:6:3.01:57,3,0
chr10	20642574	.	T	TTG	4510.79	PASS	AB=0.922;AC=22;AF=0.393;AN=56;BaseQRankSum=9.597;DP=741;FS=1.117;HRun=0;HaplotypeScore=136.7172;InbreedingCoeff=-0.5286;MQ=54.61;MQ0=14;MQRankSum=-4.903;QD=8.17;ReadPosRankSum=7.005;VQSLOD=4.3027;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:34,1:35:99:111,0,336	0/1:10,0:10:13.57:14,0,252	0/0:33,0:21:35.87:0,36,814	0/0:41,0:16:37.93:0,38,413	0/1:46,0:46:64.73:65,0,1094	0/1:20,0:19:99:111,0,119	0/1:10,15:25:99:403,0,216	0/1:28,3:27:99:181,0,537	0/1:20,1:21:99:183,0,110	0/1:42,0:41:99:101,0,912	0/1:37,0:37:83.75:84,0,990	0/1:17,3:19:99:145,0,113	0/1:22,1:23:47.36:47,0,374	0/1:20,2:22:99:119,0,130	0/0:18,0:18:54.18:0,54,826	0/0:21,0:21:63.21:0,63,939	0/0:25,0:25:72.20:0,72,1032	0/0:28,0:28:84.15:0,84,1181	0/0:22,0:20:48.57:0,49,655	0/1:26,1:27:99:551,0,227	0/1:13,13:24:99:325,0,308	0/1:26,1:26:99:368,0,438	0/1:22,1:23:79.84:80,0,247	0/1:29,11:38:99:807,0,312	0/1:24,0:24:45.24:45,0,252	0/1:23,2:24:99:511,0,254	0/1:23,1:24:99:203,0,211	1/1:4,0:3:3.01:57,3,0
chr10	20642601	.	TG	T	923.76	PASS	AB=0.781;AC=4;AF=0.071;AN=56;BaseQRankSum=0.258;DP=686;FS=5.035;HRun=1;HaplotypeScore=135.0271;InbreedingCoeff=-0.0793;MQ=59.65;MQ0=3;MQRankSum=-7.225;QD=7.51;ReadPosRankSum=0.444;VQSLOD=0.7891;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:72.24:0,72,1118	0/1:9,3:12:99:157,0,268	0/0:28,0:22:66.21:0,66,1001	0/0:37,0:25:58.54:0,59,762	0/1:24,15:39:99:330,0,847	0/0:21,0:21:39.13:0,39,619	0/0:22,0:22:63.20:0,63,961	0/0:31,0:31:90.25:0,90,1359	0/0:21,0:21:39.10:0,39,576	0/1:31,11:42:99:364,0,1206	0/1:23,7:30:99:182,0,926	0/0:18,0:18:42.14:0,42,653	0/0:22,0:22:54.17:0,54,828	0/0:15,0:15:27.09:0,27,426	0/0:18,0:18:54.15:0,54,823	0/0:17,0:17:51.17:0,51,803	0/0:27,0:27:78.22:0,78,1193	0/0:27,0:27:81.27:0,81,1261	0/0:18,0:18:51.64:0,52,785	0/0:23,0:23:63.15:0,63,952	0/0:17,0:16:48.16:0,48,721	0/0:26,0:26:60.19:0,60,924	0/0:24,0:24:45.14:0,45,687	0/0:30,1:31:40.65:0,41,1163	0/0:15,0:15:33.09:0,33,501	0/0:27,0:26:72.14:0,72,1034	0/0:37,0:37:84.27:0,84,1297	0/0:3,0:3:9.03:0,9,127
chr10	20643582	.	G	GGGCT	2946.34	PASS	AB=1.000;AC=12;AF=0.214;AN=56;BaseQRankSum=-3.295;DP=466;FS=75.962;HRun=0;HaplotypeScore=97.7926;InbreedingCoeff=0.7126;MQ=71.16;MQ0=2;MQRankSum=-0.522;QD=25.62;ReadPosRankSum=1.176;VQSLOD=0.7600;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:38.62:0,39,403	1/1:4,1:5:12.04:219,12,0	0/0:12,0:12:24.08:0,24,403	0/0:13,0:13:30.03:0,30,443	1/1:16,0:15:35.24:512,35,0	0/1:18,0:17:13.72:201,0,14	0/0:17,0:17:12.81:0,13,57	0/0:22,0:21:13.83:0,14,91	0/0:28,0:28:41.10:0,41,554	1/1:21,5:26:66.23:1355,66,0	1/1:14,5:19:35.48:651,35,0	0/0:13,0:13:19.41:0,19,244	0/0:14,0:14:18.01:0,18,215	0/0:31,0:31:34.57:0,35,341	0/0:21,0:21:48.16:0,48,809	0/0:11,0:10:14.26:0,14,183	0/0:24,0:23:69.23:0,69,1091	0/0:6,0:6:15.05:0,15,240	0/0:13,0:13:30.10:0,30,489	0/0:20,0:20:39.96:0,40,539	0/0:16,0:16:9.48:0,9,102	0/0:18,0:18:22.48:0,22,307	0/0:14,0:14:20.46:0,20,202	0/0:14,0:14:19.20:0,19,214	1/1:10,0:10:7.34:160,7,0	0/1:21,0:21:23.43:23,0,288	0/0:9,0:9:4.42:0,4,46	0/0:10,0:10:15.59:0,16,100
chr10	20643591	.	G	GGCTT	4768.93	PASS	AB=0.996;AC=29;AF=0.518;AN=56;BaseQRankSum=-3.840;DP=446;FS=13.615;HRun=0;HaplotypeScore=87.6600;InbreedingCoeff=-0.0269;MQ=66.75;MQ0=6;MQRankSum=-0.549;QD=12.99;ReadPosRankSum=1.722;VQSLOD=3.2403;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:28:99:168,0,144	0/1:5,0:5:11.03:106,0,11	0/0:8,0:8:24.03:0,24,233	0/0:10,0:10:23.99:0,24,249	1/1:16,0:15:15.10:318,15,0	1/1:5,13:17:11.13:317,11,0	1/1:19,0:19:53.69:416,54,0	1/1:24,0:19:26.88:352,27,0	0/1:30,0:30:99:232,0,231	1/1:25,0:25:15.68:646,16,0	1/1:16,0:16:34.19:372,34,0	0/1:15,0:15:89.88:129,0,90	0/1:10,0:10:58.29:86,0,58	0/1:30,0:30:99:329,0,114	0/0:20,0:20:54.07:0,54,698	0/1:10,0:9:4.98:5,0,111	0/0:25,0:24:68.87:0,69,583	0/0:6,0:6:17.99:0,18,164	0/0:10,0:10:30.04:0,30,293	0/1:19,0:19:99:106,0,214	0/1:13,0:14:44.62:100,0,45	0/1:18,0:18:99:175,0,118	0/1:12,0:12:66.74:83,0,67	0/1:13,0:13:51.34:119,0,51	1/1:5,3:8:23.97:356,24,0	0/1:20,0:20:99:133,0,107	0/1:8,0:8:0.09:126,0,0	0/1:9,0:9:50.17:97,0,50
chr10	20643592	.	GCTTTCTTT	G	414.71	PASS	AC=8;AF=0.160;AN=50;BaseQRankSum=-0.141;DP=445;FS=0.000;HRun=0;HaplotypeScore=137.9848;InbreedingCoeff=0.8117;MQ=66.68;MQ0=6;MQRankSum=-2.116;QD=8.13;ReadPosRankSum=1.155;VQSLOD=2.5250;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:42.06:0,42,1220	0/0:5,0:5:9.03:0,9,351	./.	./.	0/0:11,0:16:30.08:0,30,724	0/0:17,0:16:15.05:0,15,463	0/0:20,0:19:18.02:0,18,400	./.	0/0:30,0:30:51.04:0,51,1630	0/0:25,0:25:30.05:0,30,971	0/0:16,0:16:21.04:0,21,612	0/0:15,0:15:24.08:0,24,731	0/0:10,0:10:15.05:0,15,514	0/0:30,0:30:36.11:0,36,1044	0/0:19,0:19:33.09:0,33,1158	1/1:5,5:9:6.02:149,6,0	1/1:21,4:25:6.02:146,6,0	1/1:6,0:6:5.99:95,6,0	1/1:7,3:10:9:156,9,0	0/0:19,0:19:39.13:0,39,1378	0/0:14,0:14:12.04:0,12,315	0/0:17,0:17:24.08:0,24,800	0/0:12,0:12:21.07:0,21,622	0/0:13,0:13:18.04:0,18,493	0/0:9,0:9:18.06:0,18,505	0/0:20,0:20:27.09:0,27,921	0/0:8,0:8:8.98:0,9,153	0/0:9,0:9:9.03:0,9,334
chr10	20643653	.	CT	C	1302.35	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=3.248;DP=365;FS=3.049;HRun=7;HaplotypeScore=51.0633;InbreedingCoeff=0.9097;MQ=56.96;MQ0=4;MQRankSum=0.418;QD=22.85;ReadPosRankSum=0.243;VQSLOD=3.3074;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:74.96:0,75,905	1/1:1,7:8:21.04:213,21,0	0/0:15,0:6:9.03:0,9,113	0/0:6,0:6:7.63:0,8,144	1/1:3,15:18:42.09:428,42,0	0/0:13,0:12:33.10:0,33,404	0/0:3,0:3:6.02:0,6,75	0/0:13,0:12:33.11:0,33,415	0/0:25,0:25:69.20:0,69,842	1/1:3,14:17:42.09:428,42,0	1/1:2,12:14:39.08:392,39,0	0/0:10,0:10:27.09:0,27,340	0/0:10,0:10:30.10:0,30,377	0/0:17,0:17:48.15:0,48,604	0/0:14,0:14:33.11:0,33,415	0/0:8,0:8:21.07:0,21,264	0/0:7,0:6:12.04:0,12,151	0/0:4,0:4:12.04:0,12,151	0/0:13,0:12:33.11:0,33,415	0/0:23,0:23:63.19:0,63,779	0/0:9,0:9:27.05:0,27,322	0/0:11,0:11:30.05:0,30,359	0/0:16,0:16:45.13:0,45,555	0/0:13,0:13:30.10:0,30,377	0/0:16,0:16:45.10:0,45,545	0/0:14,0:14:39.12:0,39,491	0/0:15,0:15:42.13:0,42,528	0/0:4,0:4:12.04:0,12,151
chr10	20644542	.	ACATTTTCTGTATCCATTCCTCTGTTGAAGGG	A	3054.71	PASS	AB=0.750;AC=7;AF=0.135;AN=52;BaseQRankSum=6.143;DP=670;FS=5.176;HRun=0;HaplotypeScore=327.0211;InbreedingCoeff=0.7859;MQ=26.39;MQ0=134;MQRankSum=0.300;QD=38.18;ReadPosRankSum=0.889;VQSLOD=1.5838;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:21:48.16:0,48,4536	0/0:15,0:13:30.53:0,31,2970	./.	./.	0/0:39,0:33:84.24:0,84,7873	0/0:34,0:27:60.16:0,60,6820	0/0:13,0:8:18.02:0,18,1518	0/0:28,0:8:21.04:0,21,1387	0/0:26,0:19:48.16:0,48,5557	0/0:38,0:28:84.25:0,84,10627	0/0:27,0:22:57.19:0,57,5274	0/0:19,0:15:36:0,36,2600	0/0:26,0:20:39.61:0,40,4493	0/0:16,0:13:30.06:0,30,2390	0/0:21,0:21:57.18:0,57,5198	1/1:12,13:18:21.07:1714,21,0	1/1:20,6:10:6.91:493,7,0	0/1:8,4:6:13.98:240,0,14	1/1:10,7:10:18.04:747,18,0	0/0:47,0:23:57.15:0,57,5035	0/0:27,0:11:30.10:0,30,3410	0/0:34,0:32:87.30:0,87,10237	0/0:27,0:19:45.15:0,45,4134	0/0:19,0:8:8.98:0,9,785	0/0:28,0:21:45.11:0,45,5378	0/0:31,0:23:66.23:0,66,7444	0/0:29,0:25:63.10:0,63,6832	0/0:13,0:11:27.09:0,27,2857
chr10	20651674	.	G	GAAC	28035.31	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=7.178;DP=691;FS=16.761;HRun=0;HaplotypeScore=135.8060;InbreedingCoeff=0.9887;MQ=80.40;MQ0=0;MQRankSum=-8.777;QD=53.60;ReadPosRankSum=2.929;VQSLOD=5.7577;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,43:46:99:2348,111,0	1/1:3,8:11:30.03:583,30,0	0/0:28,0:28:65.67:0,66,1012	0/0:26,0:26:51.60:0,52,790	1/1:3,27:31:66.18:1399,66,0	1/1:3,23:26:63.13:1327,63,0	1/1:2,20:23:54.19:1203,54,0	1/1:5,34:41:99:2416,114,0	1/1:4,20:24:60.16:1296,60,0	1/1:4,26:31:78.21:1633,78,0	1/1:2,19:21:53.99:1041,54,0	1/1:4,30:35:93.20:1944,93,0	1/1:1,18:19:51.18:1151,51,0	1/1:0,12:13:30.10:678,30,0	0/0:21,0:21:60.21:0,60,997	0/0:28,1:29:10.26:0,10,1128	0/0:28,0:28:75.26:0,75,1239	0/0:19,0:19:57.17:0,57,920	0/0:17,0:17:42.13:0,42,673	1/1:2,22:25:69.08:1415,69,0	1/1:3,33:38:96.20:2027,96,0	1/1:3,20:23:48.13:1040,48,0	1/1:0,23:24:57.20:1289,57,0	1/1:0,14:14:39.13:883,39,0	1/1:1,15:15:39.09:834,39,0	1/1:1,30:33:96.20:1974,96,0	1/1:3,21:23:57.15:1228,57,0	1/1:0,5:5:15.05:327,15,0
chr10	20652804	.	T	TAA	15832.30	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-6.880;DP=572;FS=21.021;HRun=10;HaplotypeScore=62.6574;InbreedingCoeff=0.9719;MQ=61.06;MQ0=5;MQRankSum=-1.234;QD=30.33;ReadPosRankSum=1.021;VQSLOD=3.5128;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,36:41:97.16:1332,97,0	1/1:2,8:10:20.90:313,21,0	0/0:12,0:11:20.76:0,21,189	0/0:9,0:8:10.34:0,10,117	1/1:2,22:24:57.11:800,57,0	1/1:2,10:14:30.10:431,30,0	1/1:4,10:14:27.09:404,27,0	1/1:8,22:30:65.63:878,66,0	1/1:2,13:15:33.11:492,33,0	1/1:5,16:22:47.60:636,48,0	1/1:1,24:28:71.10:937,71,0	1/1:2,8:12:23.94:289,24,0	1/1:4,21:25:52.06:763,52,0	1/1:3,11:14:27.09:403,27,0	0/0:28,0:28:75.11:0,75,756	1/1:1,8:9:24.08:358,24,0	1/1:6,23:28:56.68:814,57,0	1/1:2,24:26:59.69:858,60,0	1/1:9,24:33:39.13:884,39,0	1/1:4,12:19:41.06:495,41,0	1/1:5,17:23:45.15:670,45,0	1/1:4,12:19:37.85:475,38,0	1/1:2,12:18:40.59:503,41,0	1/1:3,26:29:71.73:1030,72,0	1/1:1,12:15:29.59:411,30,0	1/1:1,20:22:59.69:858,60,0	1/1:4,13:17:42.14:611,42,0	1/1:3,4:8:14.54:188,15,0
chr10	20653238	.	T	TG	9487.12	PASS	AB=0.742;AC=21;AF=0.375;AN=56;BaseQRankSum=21.240;DP=990;FS=10.763;HRun=0;HaplotypeScore=159.7871;InbreedingCoeff=-0.5989;MQ=64.09;MQ0=0;MQRankSum=-5.172;QD=11.36;ReadPosRankSum=0.613;VQSLOD=4.9591;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:30,24:54:99:677,0,1071	0/1:9,0:10:15.97:16,0,308	0/0:27,0:26:75.23:0,75,1023	0/0:17,0:17:48.15:0,48,652	0/1:37,0:44:99:155,0,1055	0/1:28,19:47:99:690,0,937	0/1:21,18:40:99:619,0,727	0/1:40,16:52:99:332,0,1443	0/1:20,13:33:99:457,0,738	0/1:33,0:43:99:292,0,1177	0/1:25,0:35:99:270,0,812	0/1:22,18:40:99:623,0,728	0/1:21,12:33:99:334,0,784	0/1:19,13:32:99:427,0,587	0/0:24,0:24:72.24:0,72,1003	0/0:24,0:24:67.45:0,67,421	0/0:26,0:26:68.09:0,68,413	0/0:17,0:17:50:0,50,318	0/0:20,0:20:57.61:0,58,307	0/1:30,25:55:99:939,0,995	0/1:24,19:43:99:528,0,889	0/1:24,12:36:99:364,0,785	0/1:28,19:47:99:701,0,818	0/1:15,20:35:99:595,0,441	0/1:18,11:29:99:271,0,599	0/1:32,14:46:99:448,0,1091	0/1:30,15:45:99:510,0,1105	0/1:23,8:32:99:239,0,753
chr10	20653472	.	AC	A	6204.22	PASS	AB=0.980;AC=47;AF=0.839;AN=56;BaseQRankSum=3.688;DP=524;FS=0.495;HRun=1;HaplotypeScore=62.6668;InbreedingCoeff=0.2515;MQ=56.27;MQ0=14;MQRankSum=-2.012;QD=12.90;ReadPosRankSum=-0.129;VQSLOD=3.2577;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:27,1:28:71.62:465,72,0	1/1:5,0:5:7.46:42,7,0	0/0:31,1:10:6.13:0,6,118	0/1:23,0:11:18.24:20,0,18	1/1:42,1:40:73.96:465,74,0	1/1:11,0:11:31.91:229,32,0	1/1:13,1:13:34.59:254,35,0	1/1:32,1:33:71.99:507,72,0	1/1:16,0:16:38.32:300,38,0	1/1:33,0:32:83.34:575,83,0	1/1:20,0:20:52.09:355,52,0	1/1:7,0:7:17.29:111,17,0	1/1:17,1:18:38.92:240,39,0	1/1:10,1:10:22.48:144,22,0	0/1:14,1:15:20.05:20,0,194	0/0:9,2:11:2.04:0,2,132	0/1:26,1:27:9.79:10,0,310	0/1:18,0:17:20.69:21,0,156	0/1:17,0:16:8.55:9,0,221	1/1:29,0:28:75.68:554,76,0	1/1:3,2:5:7.88:54,8,0	1/1:10,1:11:32.48:253,32,0	1/1:18,0:18:47.40:318,47,0	1/1:16,0:16:36.84:269,37,0	1/1:11,0:11:32.22:211,32,0	1/1:23,2:21:47.77:337,48,0	1/1:13,0:13:34.88:241,35,0	1/1:13,0:12:29.20:201,29,0
chr10	20654579	.	TTCC	T	1653.13	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-4.765;DP=566;FS=5.474;HRun=0;HaplotypeScore=148.4107;InbreedingCoeff=0.8432;MQ=59.62;MQ0=16;MQRankSum=1.949;QD=28.50;ReadPosRankSum=-1.580;VQSLOD=3.4039;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:41:99:0,117,2058	1/1:2,1:3:6.02:90,6,0	0/0:23,0:10:9.58:0,10,116	0/0:38,0:17:10.61:0,11,247	1/1:8,8:16:42.12:592,42,0	0/0:19,0:17:48.14:0,48,828	0/0:23,0:23:57.98:0,58,921	0/0:27,0:26:51.05:0,51,805	0/0:22,0:22:55.38:0,55,981	1/1:19,9:26:2.80:789,3,0	1/1:6,5:11:24.04:325,24,0	0/0:20,0:20:54.12:0,54,898	0/0:15,0:15:33.11:0,33,672	0/0:10,0:10:27.09:0,27,541	0/0:14,0:14:36.11:0,36,691	0/0:17,0:16:36.11:0,36,677	0/0:28,0:28:81.21:0,81,1525	0/0:23,0:23:40.11:0,40,876	0/0:18,0:14:30.09:0,30,552	0/0:9,0:9:21.07:0,21,444	0/0:31,0:29:72.20:0,72,1345	0/0:16,0:16:42.13:0,42,817	0/0:21,0:21:51.15:0,51,887	0/0:28,0:28:74.73:0,75,1522	0/0:12,0:11:33.10:0,33,646	0/0:19,0:19:54.16:0,54,1016	0/0:25,0:25:63.13:0,63,1149	0/0:6,0:6:3.01:0,3,64
chr10	20654645	.	TC	T	1021.52	PASS	AB=0.900;AC=9;AF=0.161;AN=56;BaseQRankSum=3.211;DP=626;FS=1.214;HRun=8;HaplotypeScore=102.5331;InbreedingCoeff=0.8966;MQ=67.23;MQ0=10;MQRankSum=0.470;QD=15.48;ReadPosRankSum=1.342;VQSLOD=3.5873;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,120,1449	1/1:1,5:6:15.02:145,15,0	0/0:52,0:22:45.05:0,45,509	0/0:51,1:28:32.31:0,32,430	1/1:0,17:17:45.07:434,45,0	0/0:26,0:26:69:0,69,791	0/0:18,0:18:45.10:0,45,525	0/0:24,0:23:39.11:0,39,458	0/0:18,0:18:51.16:0,51,614	1/1:3,13:16:39.04:367,39,0	1/1:1,8:8:24.04:232,24,0	0/0:28,0:28:78.22:0,78,919	0/0:16,0:16:45.14:0,45,542	0/0:20,0:20:51.15:0,51,605	0/0:22,0:21:48.13:0,48,568	0/0:19,0:19:36.72:0,37,566	0/0:30,0:30:72.68:0,73,857	0/0:27,0:27:66.15:0,66,768	0/0:15,0:12:30.08:0,30,348	0/0:16,0:16:45.13:0,45,532	0/0:22,0:22:60.09:0,60,672	0/0:15,0:15:39.12:0,39,470	0/0:18,0:18:45.12:0,45,528	0/0:27,0:27:49.87:0,50,765	0/0:16,0:16:45.14:0,45,541	0/1:16,2:18:3.82:4,0,490	0/0:21,0:21:57.17:0,57,688	0/0:7,0:7:18.05:0,18,207
chr10	20655059	.	CAGACAGACAGGGAGGG	C	8150.31	PASS	AB=0.996;AC=21;AF=0.375;AN=56;BaseQRankSum=3.773;DP=729;FS=0.000;HRun=0;HaplotypeScore=321.6447;InbreedingCoeff=0.3009;MQ=47.51;MQ0=7;MQRankSum=-4.465;QD=21.79;ReadPosRankSum=-0.125;VQSLOD=2.5738;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:56.72:0,57,992	1/1:0,7:7:12.04:551,12,0	0/0:20,0:6:15.05:0,15,381	0/0:31,0:27:71.92:0,72,2505	1/1:1,19:20:27.01:973,27,0	0/0:22,0:22:32.58:0,33,592	0/1:38,0:38:94.44:94,0,634	0/1:35,0:35:99:902,0,881	0/0:30,0:29:54.18:0,54,1069	1/1:1,26:27:60.44:1806,60,0	1/1:3,18:21:24.08:1024,24,0	0/0:21,0:21:32.42:0,32,479	0/1:20,0:20:28.82:29,0,395	0/0:27,0:27:36.12:0,36,621	0/0:28,0:28:84.29:0,84,5001	1/1:32,0:32:13.36:865,13,0	1/1:31,0:31:17.38:280,17,0	0/1:23,0:23:95.60:108,0,96	0/1:23,0:23:50.56:945,0,51	0/0:24,0:24:45.14:0,45,755	0/0:31,0:31:38.29:0,38,814	0/0:19,0:19:36.12:0,36,675	0/1:17,0:16:46.25:46,0,342	0/0:34,0:34:37.76:0,38,633	0/0:14,0:14:27.07:0,27,407	0/1:25,1:26:99:408,0,800	0/1:48,0:48:89.20:89,0,1491	0/1:6,0:6:28.80:29,0,72
chr10	20655063	.	CAGACAGGGAGGG	C	11202.84	PASS	AB=1.000;AC=35;AF=0.625;AN=56;BaseQRankSum=14.424;DP=695;FS=0.819;HRun=0;HaplotypeScore=255.4768;InbreedingCoeff=-0.2975;MQ=46.57;MQ0=7;MQRankSum=-11.279;QD=17.53;ReadPosRankSum=10.658;VQSLOD=2.2829;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:52,0:52:54.07:54,0,314	1/1:7,0:7:12.04:360,12,0	0/1:18,0:5:29.71:30,0,239	0/0:26,0:22:60.21:0,60,2238	1/1:19,0:19:21.07:600,21,0	0/1:21,0:21:41.68:42,0,196	0/1:38,0:38:99:190,0,168	0/1:34,0:34:99:1173,0,367	0/1:29,0:28:49.43:49,0,431	1/1:26,0:26:51.01:1340,51,0	1/1:18,0:18:24.08:655,24,0	0/1:19,0:19:63.42:63,0,91	0/1:20,0:20:67.37:101,0,67	0/1:27,0:27:79.26:79,0,88	0/0:30,0:30:90.31:0,90,4277	1/1:2,29:31:66.23:2504,66,0	1/1:8,21:29:17.58:640,18,0	1/1:5,17:22:9.03:342,9,0	1/1:3,19:22:57.19:1550,57,0	0/1:23,0:23:83.81:84,0,155	0/1:29,0:29:34.63:35,0,367	0/1:20,0:20:38.26:38,0,189	0/1:17,0:16:84.78:85,0,124	0/1:30,0:30:7.68:8,0,222	0/1:13,0:13:44.55:45,0,66	0/1:26,0:26:99:688,0,197	0/1:43,0:43:99:390,0,260	1/1:6,0:6:8.37:60,8,0
chr10	20655067	.	CAGGGAGGG	C	19127.34	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=8.572;DP=659;FS=1.154;HRun=0;HaplotypeScore=180.9639;InbreedingCoeff=0.9045;MQ=47.46;MQ0=6;MQRankSum=-9.389;QD=32.64;ReadPosRankSum=4.706;VQSLOD=4.2755;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,37:48:30.01:758,30,0	1/1:7,0:7:12.04:267,12,0	0/0:15,0:6:12.93:0,13,478	0/0:25,0:21:60.21:0,60,2140	1/1:19,0:19:21.07:465,21,0	1/1:4,18:22:18.06:494,18,0	1/1:8,30:38:33.11:854,33,0	1/1:5,25:30:66.21:1573,66,0	1/1:8,19:26:27.09:742,27,0	1/1:26,0:26:48.44:1165,48,0	1/1:18,0:18:24.08:542,24,0	1/1:2,15:17:24.08:659,24,0	1/1:1,16:17:21.07:557,21,0	1/1:4,24:28:30.10:824,30,0	0/0:33,0:33:93.32:0,93,3628	1/1:29,0:29:66.23:1464,66,0	1/1:23,0:23:18.06:404,18,0	1/1:18,0:18:9.03:199,9,0	1/1:21,0:21:51.17:1270,51,0	1/1:2,20:22:36.09:927,36,0	1/1:8,20:28:20.89:515,21,0	1/1:4,15:19:18.06:494,18,0	1/1:3,12:14:12.04:316,12,0	1/1:7,21:28:12.04:301,12,0	1/1:2,10:12:18.06:494,18,0	1/1:4,22:26:63.22:1617,63,0	1/1:6,36:42:75.26:2022,75,0	1/1:0,6:6:9.03:203,9,0
chr10	20655543	.	GT	G	457.65	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=9.534;DP=555;FS=5.384;HRun=1;HaplotypeScore=102.8115;InbreedingCoeff=0.7915;MQ=79.67;MQ0=2;MQRankSum=0.400;QD=6.73;ReadPosRankSum=0.245;VQSLOD=0.6032;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:94.20:0,94,1378	1/1:8,0:8:18.36:77,18,0	0/0:56,2:33:42.72:0,43,771	0/0:45,1:26:26.70:0,27,398	1/1:25,1:26:61.67:298,62,0	0/0:22,0:22:66.21:0,66,960	0/0:9,0:9:27.04:0,27,359	0/0:22,0:23:60.16:0,60,809	0/0:12,0:12:12.24:0,12,440	0/1:18,0:18:16.04:97,0,16	1/1:14,2:16:7.12:128,7,0	0/0:9,0:9:27.09:0,27,399	0/0:12,0:12:36.11:0,36,511	0/0:9,0:9:27.04:0,27,326	0/0:14,0:14:42.13:0,42,605	0/0:10,0:10:16.36:0,16,180	0/0:28,0:27:74.83:0,75,763	0/0:21,0:21:58.09:0,58,537	0/0:19,0:19:15.50:0,16,365	0/0:20,0:20:57.16:0,57,799	0/0:8,0:8:24.07:0,24,338	0/0:13,0:13:39.06:0,39,550	0/0:18,0:18:54.18:0,54,793	0/0:15,0:15:45.11:0,45,624	0/0:26,0:26:61.30:0,61,1101	0/0:24,0:24:63.59:0,64,1014	0/0:20,0:20:60.20:0,60,890	0/0:17,0:17:51.14:0,51,721
chr10	20655544	.	TG	T	2025.23	PASS	AB=0.958;AC=12;AF=0.214;AN=56;BaseQRankSum=2.029;DP=562;FS=5.808;HRun=5;HaplotypeScore=100.0206;InbreedingCoeff=0.5922;MQ=81.31;MQ0=2;MQRankSum=-0.249;QD=13.78;ReadPosRankSum=0.129;VQSLOD=2.6333;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:93.19:0,93,1195	1/1:0,7:7:21.06:237,21,0	0/0:60,1:35:71.85:0,72,718	0/0:52,0:27:4.49:0,4,334	1/1:2,24:26:75.09:795,75,0	0/0:21,0:21:63.19:0,63,829	0/0:9,0:9:21.07:0,21,287	0/0:23,0:23:57.16:0,57,730	0/0:11,0:11:30.07:0,30,390	1/1:3,15:18:45.13:509,45,0	1/1:4,12:16:32.13:416,32,0	0/0:9,0:9:27.05:0,27,347	0/0:11,0:11:33.10:0,33,433	0/0:9,0:9:21:0,21,234	0/0:14,0:14:39.10:0,39,498	0/1:10,0:10:12.23:80,0,12	0/1:28,0:27:2.89:3,0,155	0/1:22,0:22:10.90:11,0,79	0/1:16,4:20:39.01:146,0,39	0/0:18,0:18:51.14:0,51,656	0/0:8,0:8:21.05:0,21,269	0/0:13,0:13:39.10:0,39,488	0/0:19,0:19:57.16:0,57,742	0/0:15,0:15:39.06:0,39,457	0/0:27,0:27:80.83:0,81,1030	0/0:25,1:26:41.23:0,41,918	0/0:20,0:20:60.18:0,60,787	0/0:17,0:17:45.15:0,45,613
chr10	20655866	.	TCACACACACACACACACACACA	T	16342.19	PASS	AB=0.835;AC=42;AF=0.778;AN=54;BaseQRankSum=7.239;DP=567;FS=30.417;HRun=0;HaplotypeScore=307.2657;InbreedingCoeff=0.2593;MQ=58.42;MQ0=5;MQRankSum=-6.717;QD=36.32;ReadPosRankSum=1.883;VQSLOD=2.4521;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:10,20:30:11.83:537,12,0	0/1:6,3:9:27.34:520,0,27	0/0:31,0:24:12.03:0,12,177	0/0:37,0:26:15.05:0,15,273	1/1:5,13:18:3.15:499,3,0	0/1:15,2:17:39.42:413,0,39	1/1:20,0:20:20.45:129,20,0	0/1:23,0:23:13.16:35,0,13	1/1:10,14:25:24.08:1327,24,0	0/1:6,6:12:16.09:336,0,16	1/1:2,7:9:12.04:578,12,0	1/1:8,12:20:17.74:1028,18,0	1/1:7,6:14:12.04:657,12,0	1/1:18,6:23:10.13:1100,10,0	0/0:17,0:16:21.07:0,21,1648	1/1:9,6:15:23.95:1077,24,0	1/1:15,16:31:9.92:385,10,0	1/1:17,4:21:38.62:834,39,0	0/1:17,0:16:7.47:26,0,7	1/1:3,7:10:12.04:600,12,0	./.	1/1:9,12:21:14.47:1121,14,0	1/1:6,12:20:3.38:817,3,0	1/1:23,2:25:11.70:230,12,0	1/1:10,11:21:36.51:1871,37,0	1/1:8,10:18:9.74:537,10,0	1/1:8,15:22:5.32:1022,5,0	0/1:4,3:7:99:666,0,144
chr10	20655884	.	A	ACGCGCG	6066.12	PASS	AB=1.000;AC=39;AF=0.696;AN=56;BaseQRankSum=1.073;DP=476;FS=45.455;HRun=0;HaplotypeScore=189.8912;InbreedingCoeff=0.2041;MQ=42.79;MQ0=21;MQRankSum=-3.137;QD=16.05;ReadPosRankSum=0.899;VQSLOD=2.4826;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:23:11.94:172,12,0	1/1:8,0:8:13.67:224,14,0	0/0:18,0:9:14.34:0,14,390	0/0:29,0:11:20.85:0,21,490	1/1:16,0:16:18.38:229,18,0	1/1:13,0:13:26.45:375,26,0	1/1:17,0:17:27.01:457,27,0	0/1:14,0:14:21.69:381,0,22	0/1:19,0:18:40.43:95,0,40	0/1:10,0:10:12.27:84,0,12	0/1:8,0:8:0.02:11,0,0	0/1:17,0:17:51.97:157,0,52	0/1:11,0:11:10.47:10,0,47	1/1:23,0:21:16.17:508,16,0	0/0:24,0:23:60.12:0,60,1207	1/1:11,0:11:8.27:173,8,0	1/1:26,0:26:14.57:244,15,0	0/1:20,0:20:1.03:691,0,1	0/1:11,0:10:1.91:307,0,2	1/1:8,0:8:1.27:85,1,0	0/0:4,18:25:0.47:0,0,1	1/1:20,0:18:24.64:288,25,0	1/1:16,0:16:22.74:176,23,0	1/1:21,1:21:24:363,24,0	1/1:21,0:19:33.96:412,34,0	1/1:14,0:13:26.72:400,27,0	1/1:21,0:20:0.64:164,1,0	0/1:8,0:7:42.05:62,0,42
chr10	20659620	.	T	TTC	4271.88	PASS	AB=0.806;AC=45;AF=0.833;AN=54;BaseQRankSum=-1.872;DP=612;FS=12.984;HRun=0;HaplotypeScore=111.5520;InbreedingCoeff=0.2362;MQ=65.82;MQ0=11;MQRankSum=0.390;QD=7.74;ReadPosRankSum=-2.167;VQSLOD=3.0339;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:38,0:37:32.47:296,32,0	1/1:16,0:17:6:52,6,0	./.	0/1:36,0:18:0:0,0,0	1/1:16,0:20:11.03:82,11,0	0/1:12,14:26:16.72:203,0,17	1/1:16,2:18:24.03:288,24,0	1/1:29,0:29:10.34:97,10,0	1/1:12,6:18:12.04:179,12,0	1/1:26,0:29:29.55:347,30,0	0/0:13,0:13:0.39:0,0,1	1/1:6,5:11:6.02:89,6,0	0/1:10,4:16:42.31:77,0,42	1/1:9,9:18:18.06:269,18,0	0/0:12,0:24:22.68:0,23,111	1/1:12,0:13:14.91:108,15,0	1/1:10,0:27:12:105,12,0	1/1:9,0:19:14.87:120,15,0	1/1:26,1:27:14.62:139,15,0	1/1:14,5:18:15.05:223,15,0	1/1:15,2:21:20.70:218,21,0	1/1:15,6:21:12.04:178,12,0	1/1:12,7:19:12.04:179,12,0	1/1:16,12:28:33.11:492,33,0	0/1:7,8:15:50.08:119,0,50	1/1:21,9:31:6.76:227,7,0	0/1:18,0:19:34.85:70,0,35	1/1:12,0:12:12.40:115,12,0
chr10	20660123	.	AGTGCGTGTGTGTGTGTGTGTGT	A	649.74	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=7.173;DP=562;FS=9.441;HRun=0;HaplotypeScore=294.8020;InbreedingCoeff=0.8247;MQ=59.99;MQ0=8;MQRankSum=1.008;QD=13.54;ReadPosRankSum=-0.121;VQSLOD=0.9761;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:57.68:0,58,2295	0/0:7,0:7:20.91:0,21,785	0/0:22,0:19:32.36:0,32,713	0/0:23,0:17:41.59:0,42,886	0/0:22,0:20:32.20:0,32,824	0/0:15,0:14:6.75:0,7,78	0/0:22,0:21:49.26:0,49,2296	0/0:31,0:30:71.58:0,72,1243	0/0:33,0:32:66.01:0,66,3684	0/0:25,0:24:70.26:0,70,2985	0/0:17,0:17:22.16:0,22,689	0/0:21,0:20:41.72:0,42,1680	0/0:14,0:14:26.76:0,27,971	0/0:20,0:20:40.55:0,41,1797	0/0:21,0:21:37.19:0,37,1612	1/1:1,12:13:3.01:54,3,0	1/1:2,0:15:5.23:124,5,0	1/1:1,4:4:3.01:57,3,0	1/1:0,15:14:41.90:549,42,0	0/0:17,0:17:43.30:0,43,1604	0/0:41,0:41:69.95:0,70,2570	0/0:22,0:22:18.06:0,18,1556	0/0:9,0:9:23.93:0,24,774	0/0:36,0:36:78.54:0,79,3860	0/0:14,0:14:23.44:0,23,868	0/0:20,0:19:50.92:0,51,2209	0/0:15,0:15:39.84:0,40,1947	0/0:11,0:10:26.85:0,27,1527
chr10	20660127	.	CGT	C	144.01	PASS	AB=0.958;AC=13;AF=0.250;AN=52;BaseQRankSum=1.203;DP=672;FS=3.490;HRun=0;HaplotypeScore=203.5135;InbreedingCoeff=0.0515;MQ=54.70;MQ0=12;MQRankSum=-0.478;QD=0.53;ReadPosRankSum=1.424;VQSLOD=2.8429;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:38:21.06:0,21,285	0/0:10,0:10:5.85:0,6,52	0/0:21,0:18:0.47:0,0,1	0/1:23,0:17:0:0,0,0	0/0:26,0:28:6:0,6,54	0/0:17,1:16:4.62:0,5,16	0/1:23,1:24:26.25:26,0,175	0/0:28,0:27:11.04:0,11,63	0/1:33,1:33:0.31:0,0,390	0/0:27,0:26:15.15:0,15,120	0/0:21,0:23:6.52:0,7,56	0/1:24,0:23:47.90:48,0,91	0/0:19,0:19:9.28:0,9,111	0/1:19,2:22:59.24:59,0,113	0/0:23,0:23:15.05:0,15,210	./.	1/1:16,0:16:2.60:10,3,0	./.	0/1:18,0:16:4.68:5,0,5	0/0:22,0:20:9.46:0,9,107	0/1:40,3:43:47.14:47,0,164	0/0:34,0:34:20.93:0,21,245	1/1:16,1:18:4.04:44,4,0	0/0:36,0:36:26.17:0,26,424	0/1:32,1:33:20.10:20,0,83	0/0:28,0:27:7.21:0,7,150	0/0:24,0:24:18.42:0,18,204	0/1:15,1:15:14.39:14,0,148
chr10	20660147	.	TG	T	2062.29	PASS	AB=0.914;AC=18;AF=0.321;AN=56;BaseQRankSum=10.021;DP=797;FS=237.437;HRun=1;HaplotypeScore=296.5140;InbreedingCoeff=-0.5159;MQ=39.13;MQ0=19;MQRankSum=-11.392;QD=3.94;ReadPosRankSum=7.108;VQSLOD=-0.5312;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:1.43:0,1,485	0/1:12,4:16:54.48:54,0,140	0/0:28,0:12:30.51:0,31,363	0/0:31,0:14:35.95:0,36,455	0/1:29,4:31:87.65:113,0,88	0/1:21,0:19:70.89:71,0,76	0/1:27,0:26:20.81:21,0,346	0/1:29,0:27:99:107,0,618	0/0:36,0:35:38.67:0,39,713	0/1:37,2:39:99:119,0,783	0/1:18,3:21:74.61:101,0,75	0/0:24,0:23:10.33:0,10,329	0/1:25,1:26:59.42:59,0,350	0/0:23,0:23:1.26:0,1,296	0/1:27,0:28:2.26:2,0,327	0/1:23,1:24:46.59:68,0,47	0/1:18,2:20:27.47:63,0,27	0/0:6,0:6:9.03:0,9,109	0/1:29,0:25:99:146,0,109	0/1:28,4:30:99:177,0,380	0/0:37,0:37:14.72:0,15,396	0/1:39,7:46:99:269,0,269	0/1:23,6:29:61.04:173,0,61	0/0:30,0:30:52.24:0,52,744	0/1:30,13:44:99:387,0,122	0/1:33,6:38:99:195,0,665	0/0:24,0:24:2.33:0,2,469	0/1:17,3:18:90.10:90,0,357
chr10	20660157	.	TG	T	2045.24	PASS	AB=0.913;AC=24;AF=0.429;AN=56;BaseQRankSum=10.762;DP=789;FS=196.696;HRun=1;HaplotypeScore=289.8985;InbreedingCoeff=-0.4345;MQ=35.49;MQ0=20;MQRankSum=-9.253;QD=3.36;ReadPosRankSum=8.608;VQSLOD=-0.0890;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:31,0:31:41.66:42,0,293	0/1:15,2:17:3.68:4,0,122	0/0:26,0:7:18.05:0,18,228	0/0:28,0:10:30.09:0,30,368	0/1:30,2:30:33.19:45,0,33	0/1:20,2:20:51.78:108,0,52	0/1:24,2:25:63.48:63,0,294	0/1:29,0:27:82.75:83,0,570	0/0:36,1:36:5.80:0,6,575	0/1:33,6:39:99:353,0,655	0/1:20,2:22:13.05:13,0,58	0/1:23,2:24:25.37:25,0,242	0/1:22,3:25:44.09:44,0,298	0/1:18,6:24:5.45:5,0,184	0/0:27,1:28:10.40:0,10,272	1/1:23,4:27:24.06:181,24,0	1/1:22,1:23:10.09:60,10,0	0/1:7,0:7:3.44:3,0,67	0/1:25,2:23:98.69:157,0,99	0/1:22,4:24:91.02:91,0,195	0/0:33,0:33:16.79:0,17,282	0/1:40,4:44:99:147,0,249	0/1:31,3:34:21.42:135,0,21	0/0:27,1:28:41.06:0,41,625	0/1:41,5:46:71.99:72,0,172	0/1:36,5:40:99:368,0,661	0/1:19,3:22:99:166,0,378	0/1:17,3:18:42.08:42,0,331
chr10	20660158	.	G	GT	2233.75	PASS	AB=0.977;AC=26;AF=0.464;AN=56;BaseQRankSum=14.031;DP=791;FS=188.773;HRun=1;HaplotypeScore=299.6002;InbreedingCoeff=-0.3715;MQ=35.34;MQ0=20;MQRankSum=-9.974;QD=3.50;ReadPosRankSum=4.559;VQSLOD=-0.0568;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:30:55.76:56,0,207	0/1:17,0:17:8.10:8,0,101	0/0:26,0:7:18.02:0,18,229	0/0:26,0:9:21.06:0,21,258	1/1:33,0:31:18.91:70,19,0	0/1:20,2:20:34.69:132,0,35	0/1:26,0:25:66.28:66,0,230	0/1:29,1:29:92:92,0,511	0/0:31,2:36:9.11:0,9,471	0/1:38,1:39:99:410,0,424	0/1:22,0:22:8.25:19,0,8	0/1:24,1:24:24.50:24,0,232	0/1:24,1:25:37.81:38,0,268	0/1:23,1:24:5.35:5,0,169	0/1:27,1:28:0.81:1,0,203	1/1:27,1:28:25.27:179,25,0	1/1:23,0:23:11.24:69,11,0	0/1:7,0:7:3.35:3,0,67	0/1:25,0:22:96.54:146,0,97	0/1:26,0:24:88.82:89,0,163	0/0:34,0:34:15.34:0,15,220	0/1:44,0:44:99:161,0,196	0/1:34,0:34:29.77:133,0,30	0/0:28,0:29:16.78:0,17,460	0/1:44,0:46:93.11:93,0,114	0/1:40,1:40:99:379,0,638	0/1:21,1:22:99:179,0,262	0/1:20,0:18:48.21:48,0,257
chr10	20660159	.	TG	T	1683.87	PASS	AB=0.963;AC=20;AF=0.357;AN=56;BaseQRankSum=11.135;DP=781;FS=141.640;HRun=1;HaplotypeScore=292.2795;InbreedingCoeff=-0.2730;MQ=35.23;MQ0=18;MQRankSum=-6.610;QD=3.41;ReadPosRankSum=6.668;VQSLOD=0.5645;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:8.56:0,9,334	0/1:16,1:17:63.06:63,0,124	0/0:26,0:7:18.05:0,18,228	0/0:25,0:8:21.07:0,21,264	0/1:26,6:31:37.11:37,0,63	0/1:22,0:20:48.90:49,0,114	0/0:26,0:25:30.11:0,30,329	0/0:31,0:29:3.05:0,3,613	0/0:37,0:36:24.64:0,25,632	0/1:35,4:39:99:241,0,608	0/1:21,1:22:52.10:52,0,75	0/1:25,0:24:2.06:2,0,281	0/0:24,1:25:12.21:0,12,367	0/0:24,0:24:21.10:0,21,228	0/1:28,0:28:5.70:6,0,282	1/1:28,0:28:8.30:81,8,0	1/1:23,0:23:6.90:63,7,0	0/1:7,0:7:23.99:24,0,66	0/1:23,0:20:24.54:25,0,119	0/1:24,1:24:90.88:91,0,246	0/0:34,0:34:28.13:0,28,276	0/1:38,6:44:99:202,0,257	0/1:31,3:34:22.46:217,0,22	0/0:28,1:29:34.68:0,35,581	0/1:46,0:46:99:202,0,128	0/1:41,0:40:99:283,0,672	0/1:19,0:19:99:109,0,311	0/1:19,0:17:99:100,0,271
chr10	20660160	.	G	GC	1952.65	PASS	AB=0.864;AC=17;AF=0.304;AN=56;BaseQRankSum=11.935;DP=778;FS=108.957;HRun=0;HaplotypeScore=310.4836;InbreedingCoeff=-0.2492;MQ=35.10;MQ0=17;MQRankSum=-7.482;QD=4.39;ReadPosRankSum=4.069;VQSLOD=0.9109;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,1:29:9.30:0,9,294	0/1:13,4:17:99:135,0,121	0/0:25,1:7:18.02:0,18,249	0/0:24,1:8:21.07:0,21,286	0/1:26,6:31:42.49:52,0,42	0/1:22,0:20:30.31:30,0,121	0/0:23,0:23:29.19:0,29,284	0/0:31,0:29:47.28:0,47,697	0/0:37,0:36:11.33:0,11,577	0/1:36,4:40:99:178,0,581	0/1:18,5:23:58.86:107,0,59	0/0:26,0:25:19.73:0,20,303	0/1:23,1:24:5.60:6,0,359	0/0:24,0:24:29.51:0,30,253	0/0:28,0:28:5.51:0,6,252	0/1:25,3:28:3.07:85,0,3	1/1:21,2:23:10.75:108,11,0	0/1:6,1:7:36.76:37,0,74	0/0:22,0:20:8.08:0,8,181	0/1:22,4:25:99:114,0,240	0/0:34,0:34:30.88:0,31,281	0/1:35,10:45:99:311,0,244	0/1:22,8:33:65.01:179,0,65	0/0:27,0:28:29.73:0,30,471	0/1:30,15:46:99:329,0,139	0/1:33,8:40:99:294,0,719	0/1:19,0:19:14.13:14,0,282	0/1:15,4:17:99:134,0,272
chr10	20674851	.	C	CT	9691.58	PASS	AB=0.642;AC=46;AF=0.821;AN=56;BaseQRankSum=-4.515;DP=592;FS=6.079;HRun=11;HaplotypeScore=71.5265;InbreedingCoeff=0.0455;MQ=69.38;MQ0=0;MQRankSum=-1.536;QD=16.94;ReadPosRankSum=0.592;VQSLOD=5.8332;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,28:35:42.90:616,43,0	0/1:5,7:12:5.11:134,0,5	0/0:20,0:17:10.63:0,11,126	0/1:15,0:11:8.93:9,0,11	0/1:13,17:30:24.29:447,0,24	0/1:6,14:20:59.06:369,0,59	1/1:3,19:22:42.08:426,42,0	1/1:7,24:31:48.80:632,49,0	1/1:5,16:21:15.84:342,16,0	0/1:4,16:20:1.45:329,0,1	0/1:9,14:25:12.93:393,0,13	1/1:1,12:15:29.22:329,29,0	1/1:2,17:19:48.10:487,48,0	0/1:4,18:22:14.83:403,0,15	1/1:5,23:28:27.78:625,28,0	1/1:1,0:11:28.41:144,28,0	1/1:10,0:19:33.61:163,34,0	1/1:13,0:26:36.96:187,37,0	1/1:12,0:17:25.59:130,26,0	1/1:5,20:25:36.79:532,37,0	0/1:4,14:18:27.52:293,0,28	1/1:3,14:17:1.54:358,2,0	1/1:4,12:16:27.05:274,27,0	1/1:4,21:25:16.65:532,17,0	1/1:2,13:15:30.06:305,30,0	1/1:5,13:19:34.26:380,34,0	1/1:6,28:34:69.14:700,69,0	1/1:4,9:13:15.03:150,15,0
chr10	20677742	.	T	TCCCCA	4437.76	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=11.497;DP=587;FS=5.800;HRun=0;HaplotypeScore=148.2925;InbreedingCoeff=0.9554;MQ=65.13;MQ0=2;MQRankSum=-10.124;QD=72.75;ReadPosRankSum=4.147;VQSLOD=6.3154;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:93.30:0,93,2110	1/1:0,5:5:15.05:401,15,0	0/0:24,0:21:62.56:0,63,1315	0/0:28,0:23:61.10:0,61,1224	1/1:0,13:15:42.10:1097,42,0	0/0:23,0:23:66.21:0,66,1471	0/0:22,0:22:60.09:0,60,1188	0/0:35,0:35:96.30:0,96,2020	0/0:32,0:32:96.28:0,96,2064	1/1:0,7:7:20.86:544,21,0	1/1:1,11:12:30.10:835,30,0	0/0:32,0:32:90.27:0,90,2002	0/0:20,0:20:60.19:0,60,1340	0/0:15,0:15:45.15:0,45,1047	0/0:35,0:35:99:0,105,2424	1/1:2,9:11:32.85:809,33,0	1/1:1,4:5:9.03:258,9,0	1/1:0,3:3:9.03:275,9,0	1/1:1,2:3:9.03:219,9,0	0/0:23,0:23:66.20:0,66,1449	0/0:42,0:42:99:0,123,2743	0/0:22,0:22:57.16:0,57,1168	0/0:20,0:20:57.20:0,57,1323	0/0:19,0:19:54.19:0,54,1247	0/0:28,0:28:84.16:0,84,1779	0/0:31,1:32:8.21:0,8,1903	0/0:21,0:21:60.16:0,60,1261	0/0:20,0:20:60.21:0,60,1385
chr10	20677743	.	GT	G	568.72	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=11.957;DP=589;FS=7.094;HRun=1;HaplotypeScore=111.9408;InbreedingCoeff=0.9422;MQ=65.94;MQ0=2;MQRankSum=-10.836;QD=9.48;ReadPosRankSum=4.562;VQSLOD=1.4178;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:93.30:0,93,1454	1/1:0,5:5:14.27:74,14,0	0/0:24,0:21:63.10:0,63,922	0/0:27,0:22:57.66:0,58,896	1/1:2,13:15:35.27:165,35,0	0/0:23,0:23:69.22:0,69,1079	0/0:25,0:25:72.19:0,72,1075	0/0:36,0:36:99:0,99,1521	0/0:33,0:33:99:0,99,1530	1/1:0,7:7:8.62:102,9,0	1/1:1,11:12:28.97:160,29,0	0/0:32,0:32:96.31:0,96,1493	0/0:19,0:19:57.19:0,57,911	0/0:15,0:15:45.15:0,45,719	0/0:35,0:35:99:0,105,1654	1/1:2,9:11:15.35:127,15,0	1/1:0,4:4:7.94:36,8,0	1/1:0,3:3:8.87:59,9,0	1/1:1,2:3:5.93:40,6,0	0/0:23,0:23:66.21:0,66,1031	0/0:43,0:43:99:0,123,1954	0/0:22,0:22:66.21:0,66,1025	0/0:20,0:20:57.19:0,57,906	0/0:20,0:20:57.18:0,57,888	0/0:27,0:27:81.24:0,81,1248	0/0:31,1:32:78.28:0,78,1448	0/0:20,0:20:60.19:0,60,929	0/0:20,0:20:60.20:0,60,959
chr10	20677748	.	T	TAG	1278.05	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=11.784;DP=602;FS=8.366;HRun=0;HaplotypeScore=124.6938;InbreedingCoeff=0.9350;MQ=71.51;MQ0=2;MQRankSum=-11.131;QD=22.42;ReadPosRankSum=5.198;VQSLOD=4.1795;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:87.30:0,87,1416	1/1:0,5:5:15.02:147,15,0	0/0:28,0:25:72.24:0,72,1118	0/0:25,0:20:53.32:0,53,781	1/1:2,13:15:35.98:313,36,0	0/0:23,0:23:69.24:0,69,1116	0/0:23,0:23:66.22:0,66,1052	0/0:39,0:39:99:0,111,1763	0/0:34,0:34:99:0,99,1590	1/1:0,7:7:15.37:205,15,0	1/1:0,11:11:30.04:290,30,0	0/0:33,0:33:96.31:0,96,1541	0/0:19,0:19:57.19:0,57,927	0/0:16,0:16:45.15:0,45,731	0/0:34,0:34:99:0,102,1611	1/1:1,9:10:5.01:232,5,0	1/1:0,4:4:9.02:94,9,0	1/1:0,3:3:9.03:115,9,0	1/1:0,2:2:6.02:75,6,0	0/0:24,0:24:66.21:0,66,1050	0/0:42,0:42:99:0,123,1972	0/0:22,0:22:66.23:0,66,1065	0/0:24,0:24:66.19:0,66,1018	0/0:21,0:21:57.19:0,57,930	0/0:24,0:24:69.24:0,69,1120	0/0:36,1:37:71.49:0,71,1607	0/0:25,0:25:72.20:0,72,1093	0/0:20,0:20:60.20:0,60,978
chr10	20677749	.	GCCT	G	1068.72	PASS	AB=0.526;AC=15;AF=0.268;AN=56;BaseQRankSum=11.999;DP=604;FS=8.189;HRun=0;HaplotypeScore=134.7031;InbreedingCoeff=0.8995;MQ=72.10;MQ0=2;MQRankSum=-11.301;QD=18.75;ReadPosRankSum=4.437;VQSLOD=2.8210;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:90.31:0,90,2078	1/1:0,5:5:14.96:125,15,0	0/0:28,0:25:72.10:0,72,1364	0/0:25,0:20:50.16:0,50,1030	1/1:2,13:15:37.41:281,37,0	0/0:23,0:23:66.23:0,66,1560	0/0:23,0:23:63.07:0,63,1384	0/0:39,0:39:99:0,114,2492	0/0:34,0:34:99:0,99,2298	1/1:0,7:7:18.01:179,18,0	1/1:0,11:11:31.53:262,32,0	0/0:33,0:33:99:0,99,2242	0/0:20,0:20:57.20:0,57,1303	0/0:17,0:17:51.18:0,51,1170	0/0:33,0:33:99:0,99,2278	0/1:1,9:10:2.26:184,0,2	1/1:0,4:4:8.95:68,9,0	1/1:0,3:3:9.02:97,9,0	1/1:0,2:2:6.01:63,6,0	0/0:25,0:25:72.23:0,72,1587	0/0:43,0:43:99:0,126,2904	0/0:22,0:22:66.23:0,66,1555	0/0:23,0:23:66.23:0,66,1522	0/0:21,0:21:60.21:0,60,1416	0/0:24,0:24:69.22:0,69,1555	0/0:36,1:37:81.79:0,82,2349	0/0:25,0:25:75.23:0,75,1657	0/0:20,0:20:60.21:0,60,1407
chr10	20677872	.	A	ATGTCTGTC	510.71	PASS	AB=1.000;AC=10;AF=0.192;AN=52;BaseQRankSum=2.556;DP=581;FS=14.575;HRun=0;HaplotypeScore=209.9288;InbreedingCoeff=0.2732;MQ=61.32;MQ0=5;MQRankSum=-5.919;QD=3.15;ReadPosRankSum=-4.636;VQSLOD=0.3801;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:28:11.69:12,0,280	0/0:7,0:7:2.60:0,3,10	0/0:26,0:19:3.85:0,4,21	0/0:25,0:24:9.01:0,9,119	./.	0/1:13,0:13:2.04:2,0,114	0/0:26,0:26:10.78:0,11,265	0/0:32,0:30:29.67:0,30,396	0/1:17,0:17:4.12:4,0,133	0/0:16,0:16:12.04:0,12,157	./.	1/1:20,0:20:3.01:41,3,0	0/1:21,0:21:74.30:74,0,75	0/0:19,0:19:0.51:0,1,52	1/1:22,18:41:12.04:490,12,0	0/0:15,0:15:24.06:0,24,355	0/0:13,0:13:2.04:0,2,6	0/0:8,0:8:11.99:0,12,177	0/0:13,0:12:6.02:0,6,95	0/0:25,0:25:6.57:0,7,163	0/0:43,0:43:47.84:0,48,647	0/0:22,0:22:27.15:0,27,395	0/0:13,0:13:14.70:0,15,191	0/0:28,0:28:38.54:0,39,520	0/0:19,0:19:10.45:0,10,162	0/0:26,0:26:22.10:0,22,347	1/1:22,0:22:4.41:13,4,0	0/0:9,0:9:1.83:0,2,80
chr10	20677896	.	CTG	C	458.50	PASS	AB=0.981;AC=21;AF=0.375;AN=56;BaseQRankSum=6.307;DP=597;FS=0.000;HRun=0;HaplotypeScore=173.7895;InbreedingCoeff=0.1474;MQ=49.08;MQ0=14;MQRankSum=-2.479;QD=1.44;ReadPosRankSum=-4.345;VQSLOD=1.3740;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:36,0:35:2.04:2,0,207	1/1:7,0:6:10.74:70,11,0	0/0:16,0:8:18.95:0,19,309	0/1:24,0:14:15.98:16,0,363	1/1:24,0:22:0.47:1,0,0	0/0:10,0:10:17.96:0,18,211	0/1:26,4:29:89.40:89,0,281	0/0:40,1:39:91.49:0,91,850	0/0:18,1:19:20.49:0,20,177	1/1:15,0:14:14.96:185,15,0	1/1:18,0:15:2.99:24,3,0	0/1:18,0:18:7.99:8,0,14	0/1:21,0:21:10.55:11,0,68	0/0:21,0:20:11.03:0,11,88	0/0:39,0:39:56.90:0,57,804	0/1:12,0:12:29.52:30,0,57	1/1:13,0:12:11.81:75,12,0	0/1:8,0:8:23.86:24,0,27	0/1:10,0:8:5.50:52,0,6	0/0:24,0:24:18.09:0,18,105	0/1:40,1:40:8.75:9,0,469	0/0:24,0:24:42.97:0,43,308	0/0:20,2:19:26.05:0,26,205	0/0:25,2:26:29.34:0,29,381	0/0:16,0:16:19.90:0,20,155	0/1:30,1:29:29.85:30,0,442	0/0:19,0:19:6.02:0,6,67	0/1:10,0:10:0.03:0,0,106
chr10	20677898	.	G	GTCTC	3733.54	PASS	AB=0.840;AC=43;AF=0.768;AN=56;BaseQRankSum=3.402;DP=623;FS=9.276;HRun=0;HaplotypeScore=194.0680;InbreedingCoeff=0.0435;MQ=49.48;MQ0=14;MQRankSum=0.648;QD=6.40;ReadPosRankSum=-0.507;VQSLOD=1.9213;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:35,0:35:15.90:162,16,0	1/1:7,0:6:8.39:50,8,0	0/0:15,0:7:15.44:0,15,157	0/0:22,0:12:21.90:0,22,273	1/1:23,0:21:0.47:1,0,0	0/1:3,6:10:19.57:132,0,20	1/1:25,2:28:15.43:287,15,0	0/1:44,0:42:83.06:299,0,83	1/1:7,13:22:11.94:279,12,0	1/1:15,0:14:12.28:91,12,0	1/1:18,0:15:5.72:49,6,0	1/1:1,2:21:5.95:70,6,0	1/1:4,0:25:0.92:87,1,0	1/1:4,17:23:1.01:92,1,0	0/1:37,0:37:95.41:95,0,235	0/1:11,0:11:18.17:18,0,69	1/1:13,0:12:11.79:76,12,0	0/1:8,0:8:31.97:65,0,32	0/1:10,0:8:5.86:107,0,6	0/1:4,23:29:0.21:67,0,0	1/1:40,0:42:25.53:336,26,0	1/1:25,1:26:14.34:155,14,0	1/1:19,0:18:21.88:175,22,0	0/1:22,1:25:23.42:197,0,23	1/1:5,10:18:14.99:181,15,0	1/1:30,0:29:22.74:418,23,0	1/1:0,20:24:5.47:144,5,0	0/1:3,7:12:16.61:101,0,17
chr10	20678832	.	GACTAAAGGCGTTGCACCACAATCATACA	G	9131.02	PASS	AB=0.781;AC=16;AF=0.286;AN=56;BaseQRankSum=10.710;DP=592;FS=7.902;HRun=0;HaplotypeScore=410.9148;InbreedingCoeff=0.7766;MQ=81.21;MQ0=0;MQRankSum=-9.508;QD=72.47;ReadPosRankSum=4.768;VQSLOD=2.2964;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,117,12396	1/1:1,3:4:9.03:601,9,0	0/0:20,0:20:57.20:0,57,2981	0/0:25,0:25:52:0,52,3990	1/1:8,5:13:6.49:341,6,0	0/0:27,0:27:81.28:0,81,9739	0/0:25,0:25:72.23:0,72,7000	0/0:29,0:29:81.28:0,81,6508	0/0:27,0:27:75.26:0,75,8842	1/1:2,9:11:27.08:1674,27,0	1/1:2,7:9:12.04:800,12,0	0/0:20,0:20:54.17:0,54,5811	0/0:23,0:23:69.24:0,69,7293	0/0:26,0:26:78.27:0,78,8352	0/0:37,0:37:99:0,105,11801	0/1:8,17:25:99:2654,0,683	1/1:8,7:15:12.04:899,12,0	1/1:5,8:13:15.05:1123,15,0	1/1:3,4:7:12.04:899,12,0	0/0:20,0:20:57.20:0,57,6140	0/0:37,0:37:99:0,108,10474	0/0:11,0:11:30.09:0,30,3424	0/0:13,0:13:39.11:0,39,3624	0/0:22,0:22:60.21:0,60,6688	0/0:23,0:23:69.24:0,69,7769	0/1:28,1:28:99:140,0,9311	0/0:29,0:29:81.23:0,81,8361	0/0:11,0:11:33.11:0,33,2567
chr10	20679682	.	CA	C	1186.49	PASS	AC=32;AF=0.941;AN=34;BaseQRankSum=1.639;DP=59;FS=6.651;HRun=4;HaplotypeScore=32.1606;InbreedingCoeff=0.1895;MQ=44.94;MQ0=0;MQRankSum=-1.733;QD=21.97;ReadPosRankSum=1.639;VQSLOD=2.1438;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,2:2:6.02:72,6,0	1/1:0,2:2:3:36,3,0	0/0:1,0:1:2.98:0,3,21	./.	1/1:0,1:1:0.47:1,0,0	1/1:0,1:1:3.01:36,3,0	1/1:1,5:6:15.05:179,15,0	./.	./.	1/1:1,2:3:6.02:71,6,0	./.	./.	1/1:0,1:1:3.01:36,3,0	1/1:1,1:2:3.01:36,3,0	./.	1/1:0,2:2:6.02:72,6,0	1/1:1,2:3:3.01:36,3,0	1/1:0,9:9:21.01:234,21,0	1/1:0,1:1:3.01:36,3,0	./.	1/1:2,8:10:9:107,9,0	./.	1/1:0,1:1:3.01:36,3,0	1/1:0,7:7:18.05:214,18,0	./.	1/1:0,3:3:6.02:72,6,0	./.	./.
chr10	20680161	.	TACAC	T	2035.09	PASS	AB=0.863;AC=39;AF=0.813;AN=48;BaseQRankSum=3.887;DP=507;FS=1.061;HRun=0;HaplotypeScore=136.1418;InbreedingCoeff=0.1938;MQ=62.79;MQ0=14;MQRankSum=-3.865;QD=5.08;ReadPosRankSum=-1.288;VQSLOD=2.6023;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:26:10.57:88,11,0	./.	./.	./.	0/0:10,0:13:8.27:0,8,39	1/1:19,0:18:17.39:147,17,0	1/1:16,0:16:3:28,3,0	0/1:29,0:29:0.05:0,0,0	1/1:24,0:24:18.02:167,18,0	0/0:11,0:11:8.56:0,9,46	0/1:5,0:5:15.16:15,0,15	1/1:29,0:29:17.97:167,18,0	1/1:8,0:8:9.01:84,9,0	1/1:18,0:18:20.77:194,21,0	0/1:15,8:25:57.27:235,0,57	0/1:14,0:19:34.14:34,0,41	1/1:9,8:18:18.06:280,18,0	0/1:12,3:15:25.11:85,0,25	1/1:10,1:11:3.01:45,3,0	1/1:12,0:12:3:28,3,0	1/1:18,0:18:2.66:11,3,0	1/1:8,0:8:3:28,3,0	./.	1/1:29,0:29:3:28,3,0	1/1:17,0:17:13.83:116,14,0	1/1:21,0:21:15.02:139,15,0	1/1:23,0:23:12.01:111,12,0	1/1:10,0:10:15.02:139,15,0
chr10	20680196	.	ACACACACACACCCG	A	6061.07	PASS	AB=0.922;AC=28;AF=0.500;AN=56;BaseQRankSum=9.454;DP=555;FS=9.259;HRun=0;HaplotypeScore=172.1420;InbreedingCoeff=0.4813;MQ=58.48;MQ0=19;MQRankSum=-4.023;QD=16.88;ReadPosRankSum=5.556;VQSLOD=2.7307;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:22,2:24:11.11:384,11,0	0/0:3,0:2:6.02:0,6,115	0/0:22,0:13:34.36:0,34,690	0/0:27,0:11:27.05:0,27,653	0/0:18,0:18:36.11:0,36,1155	1/1:21,1:21:21.07:523,21,0	1/1:19,0:19:2.81:76,3,0	1/1:28,0:26:16.30:715,16,0	1/1:24,1:24:17.36:509,17,0	0/0:10,0:10:30.10:0,30,889	0/0:5,0:5:12.04:0,12,296	0/1:29,0:29:4.21:439,0,4	1/1:15,0:15:7.78:227,8,0	1/1:19,0:19:22.99:549,23,0	0/0:25,0:25:63.17:0,63,1671	0/0:25,0:24:64.43:0,64,1763	0/0:25,0:25:64.10:0,64,1552	0/0:22,0:22:45.66:0,46,1136	0/0:13,0:13:34.64:0,35,546	0/1:16,1:17:18.31:71,0,18	0/1:29,0:28:17.05:52,0,17	1/1:13,0:13:3.01:76,3,0	1/1:11,0:10:0.87:1,1,0	0/1:23,0:23:14.53:114,0,15	1/1:20,1:21:15.05:411,15,0	0/1:31,0:31:99:1080,0,133	0/1:7,16:23:30.92:455,0,31	1/1:9,0:9:15.05:380,15,0
chr10	20680198	.	ACACACACACCCG	A	8062.20	PASS	AB=0.538;AC=32;AF=0.571;AN=56;BaseQRankSum=8.154;DP=549;FS=8.149;HRun=0;HaplotypeScore=148.0365;InbreedingCoeff=0.7042;MQ=61.74;MQ0=19;MQRankSum=-4.190;QD=22.71;ReadPosRankSum=4.228;VQSLOD=3.4103;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:3,21:24:10.46:395,10,0	0/0:3,0:2:5.99:0,6,48	0/0:23,0:14:28.38:0,28,707	0/0:27,0:10:30.06:0,30,610	0/0:17,0:17:33.11:0,33,949	1/1:3,19:21:21.07:723,21,0	1/1:2,18:20:2.81:115,3,0	1/1:29,0:27:52.09:989,52,0	1/1:3,22:24:17.61:672,18,0	0/0:11,0:11:33.11:0,33,769	0/0:5,0:5:12.04:0,12,244	1/1:4,27:31:16.71:689,17,0	1/1:1,14:15:8.16:344,8,0	1/1:2,17:19:20.41:805,20,0	0/0:23,0:23:52.65:0,53,1321	0/0:25,0:24:64.43:0,64,1426	0/0:25,0:25:64.07:0,64,1299	0/0:22,0:22:33.08:0,33,914	0/0:13,0:13:33.96:0,34,469	1/1:2,14:16:3.01:115,3,0	0/1:4,23:26:16.74:92,0,17	1/1:2,12:14:3.01:115,3,0	1/1:2,9:10:0.84:1,1,0	1/1:4,18:21:5.85:129,6,0	1/1:1,20:21:15.05:533,15,0	0/1:4,26:30:92.17:1272,0,92	1/1:20,1:20:20.70:494,21,0	1/1:0,8:8:15.05:577,15,0
chr10	20680206	.	ACCCG	A	3937.14	PASS	AB=1.000;AC=34;AF=0.630;AN=54;BaseQRankSum=10.302;DP=513;FS=2.918;HRun=0;HaplotypeScore=113.0617;InbreedingCoeff=0.6579;MQ=67.69;MQ0=9;MQRankSum=-4.325;QD=11.48;ReadPosRankSum=5.001;VQSLOD=2.9486;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:24:10.69:155,11,0	./.	0/0:26,0:18:39.16:0,39,858	0/0:22,0:11:33.07:0,33,508	0/0:16,0:16:30.09:0,30,430	1/1:21,0:21:21.07:274,21,0	1/1:20,0:20:3.01:40,3,0	1/1:1,22:22:66.05:965,66,0	1/1:25,0:24:18.06:242,18,0	0/0:14,0:14:36.12:0,36,638	0/0:5,0:5:6.02:0,6,81	1/1:29,0:29:16.68:240,17,0	1/1:14,0:14:9.03:121,9,0	1/1:18,0:18:20.12:280,20,0	0/0:21,0:21:24.98:0,25,602	0/0:19,0:19:42.64:0,43,729	0/0:23,0:23:13.66:0,14,523	0/0:23,0:23:18.58:0,19,634	0/1:14,0:14:15.14:15,0,447	1/1:15,0:15:3.01:40,3,0	1/1:24,0:24:2.99:24,3,0	1/1:12,0:12:3.01:40,3,0	1/1:11,0:10:0.17:1,0,0	1/1:19,0:18:3.01:40,3,0	1/1:21,0:21:15.05:197,15,0	0/1:28,0:28:9.55:897,0,10	1/1:17,0:16:12.03:161,12,0	1/1:8,0:8:15.05:202,15,0
chr10	20681243	.	AT	A	2660.11	PASS	AB=1.000;AC=33;AF=0.589;AN=56;BaseQRankSum=-2.292;DP=523;FS=32.624;HRun=3;HaplotypeScore=70.7520;InbreedingCoeff=0.8342;MQ=63.24;MQ0=2;MQRankSum=-0.611;QD=8.81;ReadPosRankSum=0.401;VQSLOD=-0.4320;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:18:10.07:70,10,0	0/0:5,0:5:12.01:0,12,124	0/0:20,0:9:11.92:0,12,104	0/0:25,0:14:8.53:0,9,140	0/0:21,0:21:57.20:0,57,606	1/1:24,0:24:28.74:208,29,0	0/1:14,0:14:0.58:41,0,1	1/1:32,2:33:59.46:436,59,0	1/1:25,0:25:13.83:152,14,0	0/0:28,0:28:74.56:0,75,818	0/0:16,0:16:45.05:0,45,504	1/1:9,1:10:7.19:100,7,0	1/1:19,0:19:20.19:159,20,0	1/1:12,1:13:1.09:98,1,0	0/0:23,0:23:56.10:0,56,708	0/0:16,0:16:28.78:0,29,298	0/0:22,0:22:57.55:0,58,534	0/0:22,0:22:62.06:0,62,627	0/0:22,0:21:53.99:0,54,545	1/1:17,0:17:22.89:198,23,0	1/1:9,0:9:5.46:30,5,0	1/1:3,10:13:27.47:174,27,0	1/1:22,1:23:30.02:291,30,0	1/1:13,1:14:17.15:180,17,0	1/1:19,1:20:31.62:284,32,0	1/1:15,2:17:25.81:231,26,0	1/1:17,1:18:1.09:99,1,0	1/1:14,0:14:11.70:120,12,0
chr10	20681539	.	C	CCAAAAA	1434.36	PASS	AB=1.000;AC=10;AF=0.179;AN=56;BaseQRankSum=-5.370;DP=572;FS=2.429;HRun=0;HaplotypeScore=193.8477;InbreedingCoeff=0.2887;MQ=68.47;MQ0=5;MQRankSum=-1.396;QD=10.03;ReadPosRankSum=-5.052;VQSLOD=1.6811;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,121,1948	0/1:7,0:7:10.96:130,0,11	0/0:43,0:21:3.20:0,3,204	0/0:15,0:7:5.22:0,5,36	0/1:18,0:18:63.73:217,0,64	0/0:26,0:25:60.17:0,60,958	0/0:19,0:18:39.02:0,39,612	0/0:30,0:30:70.18:0,70,1026	0/0:16,0:16:42.01:0,42,691	1/1:26,0:25:10.97:368,11,0	0/1:19,0:19:3.07:168,0,3	0/0:13,0:12:24.07:0,24,366	0/0:20,0:20:54.18:0,54,916	0/0:19,0:19:50.84:0,51,719	0/0:16,0:16:39.09:0,39,632	0/1:18,0:18:39.45:120,0,39	1/1:6,8:18:11.92:181,12,0	0/1:18,0:16:13.18:144,0,13	0/1:18,0:18:15.83:257,0,16	0/0:23,0:23:59.95:0,60,918	0/0:6,0:6:18.06:0,18,308	0/0:8,0:8:15.03:0,15,234	0/0:15,0:15:38.88:0,39,602	0/0:22,0:22:57.17:0,57,894	0/0:23,0:22:57.13:0,57,894	0/0:28,0:28:78.12:0,78,1213	0/0:27,0:27:60.16:0,60,981	0/0:14,0:14:39.09:0,39,567
chr10	20681550	.	A	AG	8699.06	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=1.867;DP=573;FS=4.156;HRun=0;HaplotypeScore=111.3320;InbreedingCoeff=0.9362;MQ=64.05;MQ0=6;MQRankSum=0.169;QD=24.64;ReadPosRankSum=9.193;VQSLOD=5.0570;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:11,35:46:99:1234,102,0	0/0:7,0:7:11.56:0,12,66	0/0:40,0:15:3.55:0,4,212	0/0:12,0:3:2.17:0,2,35	0/0:17,0:17:37.83:0,38,297	1/1:1,25:25:54.16:613,54,0	1/1:2,12:14:35.76:373,36,0	1/1:2,27:29:77.55:725,78,0	1/1:2,18:20:43.90:455,44,0	0/0:29,0:28:42.61:0,43,451	0/0:20,0:20:34.45:0,34,235	1/1:1,10:10:21.06:236,21,0	1/1:0,23:23:57.12:598,57,0	1/1:4,16:20:56.43:580,56,0	0/0:14,0:14:39.97:0,40,468	0/0:20,0:19:12.81:0,13,74	0/0:21,0:20:20.44:0,20,134	0/0:18,0:16:29.50:0,29,196	0/0:22,0:21:52.64:0,53,407	1/1:0,25:25:68.64:624,69,0	1/1:0,6:6:18.05:203,18,0	1/1:0,10:10:23.88:237,24,0	1/1:2,15:18:28.28:318,28,0	1/1:2,17:19:50.19:498,50,0	1/1:1,20:20:50.52:544,51,0	1/1:3,22:25:50.81:682,51,0	1/1:3,23:26:48.81:475,49,0	1/1:0,13:13:27.08:305,27,0
chr10	20681553	.	A	AG	9025.64	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=1.556;DP=561;FS=1.812;HRun=0;HaplotypeScore=109.6003;InbreedingCoeff=0.9793;MQ=64.90;MQ0=6;MQRankSum=1.399;QD=25.86;ReadPosRankSum=8.595;VQSLOD=5.2142;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:43,2:45:99:1324,130,0	0/0:8,0:8:11.22:0,11,61	0/0:37,0:16:30.55:0,31,244	0/0:11,0:3:8.91:0,9,65	0/0:17,0:17:37.68:0,38,284	1/1:25,0:24:54.15:601,54,0	1/1:15,0:14:37.32:390,37,0	1/1:30,1:31:83.90:796,84,0	1/1:19,0:19:44.84:466,45,0	0/0:26,0:25:53.77:0,54,397	0/0:20,0:20:34.27:0,34,230	1/1:10,0:9:21.06:237,21,0	1/1:23,0:23:57.10:590,57,0	1/1:20,0:20:58.27:578,58,0	0/0:13,0:13:36.55:0,37,436	0/0:19,0:18:12.61:0,13,70	0/0:22,0:21:22.87:0,23,146	0/0:17,0:15:26.17:0,26,164	0/0:22,0:21:48.34:0,48,364	1/1:21,0:21:59.89:571,60,0	1/1:6,0:6:18.05:203,18,0	1/1:10,0:10:23.86:235,24,0	1/1:17,0:17:33.63:353,34,0	1/1:17,2:19:51.08:527,51,0	1/1:22,0:21:52.35:552,52,0	1/1:24,1:25:70.13:728,70,0	1/1:27,1:28:55.33:573,55,0	1/1:13,0:13:27.08:303,27,0
chr10	20681798	.	TG	T	3059.73	PASS	AB=0.941;AC=33;AF=0.589;AN=56;BaseQRankSum=11.395;DP=624;FS=26.419;HRun=3;HaplotypeScore=128.1546;InbreedingCoeff=0.8096;MQ=67.54;MQ0=17;MQRankSum=-8.244;QD=10.93;ReadPosRankSum=-1.453;VQSLOD=0.3312;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:18,4:21:36.59:265,37,0	0/0:8,0:8:21.05:0,21,275	0/0:57,0:27:19.65:0,20,290	0/0:64,1:23:5.05:0,5,194	0/0:21,0:21:63.07:0,63,806	1/1:9,1:10:22.76:153,23,0	1/1:10,1:11:29.55:240,30,0	1/1:22,2:24:19.28:266,19,0	1/1:10,3:14:25.80:207,26,0	0/0:33,0:32:93.05:0,93,1202	0/0:23,0:23:66.15:0,66,903	0/1:15,1:16:0.83:98,0,1	1/1:11,2:12:0.73:68,1,0	1/1:17,1:18:9.18:142,9,0	0/0:22,0:22:66.19:0,66,909	0/0:28,0:28:81.17:0,81,1116	0/0:33,0:33:96.24:0,96,1314	0/0:26,0:26:72.12:0,72,934	0/0:27,0:26:55.81:0,56,827	1/1:25,4:29:28:316,28,0	1/1:6,0:5:8.89:61,9,0	1/1:18,2:20:37.44:326,37,0	1/1:14,3:19:1.69:224,2,0	1/1:16,3:17:33.79:225,34,0	1/1:7,3:11:2.40:120,2,0	1/1:15,5:20:24.59:266,25,0	1/1:16,4:19:31.20:262,31,0	1/1:2,1:3:3:29,3,0
chr10	20681800	.	G	GT	229.40	PASS	AB=0.978;AC=13;AF=0.232;AN=56;BaseQRankSum=5.671;DP=632;FS=9.754;HRun=0;HaplotypeScore=147.5120;InbreedingCoeff=-0.1222;MQ=65.39;MQ0=18;MQRankSum=-3.616;QD=0.76;ReadPosRankSum=-2.367;VQSLOD=1.5360;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:22:13.23:13,0,72	0/0:7,0:7:21.07:0,21,281	0/1:55,2:25:42.42:42,0,289	0/1:64,0:23:5.10:5,0,169	0/0:23,0:23:62.01:0,62,826	0/1:10,0:10:0.28:0,0,50	0/0:10,0:10:12.81:0,13,48	0/1:29,0:27:18.71:19,0,101	0/1:13,0:13:15.99:16,0,44	0/0:35,0:34:96.16:0,96,1257	0/0:25,0:25:66.22:0,66,914	0/0:16,0:16:12.36:0,12,87	0/0:13,0:12:3.99:0,4,72	0/0:18,0:18:4.03:0,4,47	0/0:22,0:22:66.22:0,66,922	0/0:28,0:28:81.26:0,81,1109	0/0:35,0:35:99:0,102,1378	0/0:26,0:26:72.24:0,72,989	0/0:25,0:25:73.27:0,73,916	0/1:27,1:28:52.90:53,0,145	1/1:5,1:5:6.38:43,6,0	0/1:18,0:19:41.81:42,0,62	0/1:20,0:20:47.94:48,0,63	0/1:19,0:17:38.48:56,0,38	0/1:10,1:10:23.66:38,0,24	0/0:21,0:21:27.12:0,27,161	0/0:23,0:20:16.73:0,17,112	0/0:3,0:3:1.82:0,2,5
chr10	20681809	.	TGTTTTG	T	4279.91	PASS	AB=0.869;AC=20;AF=0.357;AN=56;BaseQRankSum=7.246;DP=652;FS=40.501;HRun=0;HaplotypeScore=192.4400;InbreedingCoeff=-0.2204;MQ=57.07;MQ0=21;MQRankSum=-5.720;QD=11.44;ReadPosRankSum=-7.577;VQSLOD=-0.7455;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:24,1:23:25.03:300,0,25	0/0:8,0:8:23.97:0,24,604	0/0:50,0:19:4.68:0,5,131	0/1:49,0:16:54.75:55,0,106	0/0:23,0:23:66.21:0,66,1943	0/1:11,0:11:45.50:85,0,46	1/1:9,3:12:13.92:336,14,0	0/1:31,4:33:93.84:635,0,94	0/1:10,3:14:25.18:351,0,25	0/0:31,0:30:84.17:0,84,2521	0/0:26,0:26:75.07:0,75,2123	0/1:12,2:16:99:143,0,189	0/1:10,1:11:99:115,0,157	0/1:19,3:22:99:260,0,310	0/0:22,0:22:66.21:0,66,2038	0/0:29,0:29:81.21:0,81,2519	0/0:35,0:35:99:0,102,3099	0/0:27,0:27:72.13:0,72,2022	0/0:25,0:23:60.92:0,61,1629	0/1:27,3:30:99:273,0,229	0/1:5,1:5:1.64:50,0,2	0/1:12,5:17:99:338,0,153	0/1:21,2:25:99:251,0,154	0/1:15,2:17:99:265,0,100	0/1:9,1:11:47.84:165,0,48	0/1:23,1:26:99:290,0,201	0/1:26,1:22:99:194,0,214	1/1:10,0:10:18.34:174,18,0
chr10	20681821	.	TTG	T	2421.35	PASS	AB=0.935;AC=23;AF=0.411;AN=56;BaseQRankSum=12.389;DP=634;FS=66.721;HRun=0;HaplotypeScore=153.8653;InbreedingCoeff=0.0824;MQ=54.36;MQ0=20;MQRankSum=-8.863;QD=6.44;ReadPosRankSum=-2.707;VQSLOD=0.7266;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:26,1:25:16.03:222,0,16	0/0:6,0:6:18.06:0,18,310	0/1:40,1:11:2.70:3,0,75	0/0:38,1:12:5.97:0,6,66	0/0:21,0:21:60.20:0,60,985	1/1:10,0:9:11.72:59,12,0	0/1:12,0:11:7.83:53,0,8	0/1:31,9:35:0.25:456,0,0	1/1:16,2:18:11.54:261,12,0	0/0:31,0:30:84.15:0,84,1334	0/0:25,0:25:65.98:0,66,1071	0/1:16,1:17:87.24:117,0,87	0/1:11,0:10:38.91:39,0,66	0/1:19,1:20:66.45:66,0,120	0/0:23,0:23:66.21:0,66,1111	0/0:29,0:29:84.26:0,84,1423	0/0:33,0:33:96.17:0,96,1588	0/0:28,0:28:75.19:0,75,1206	0/0:23,0:22:59.64:0,60,906	0/1:26,2:27:91.41:122,0,91	1/1:7,0:6:5.89:36,6,0	0/1:17,1:18:7.94:97,0,8	0/1:18,5:23:73.16:191,0,73	0/1:19,0:17:11.33:120,0,11	1/1:10,3:12:8.58:110,9,0	0/1:28,1:29:99:219,0,145	0/1:25,5:23:77.06:192,0,77	1/1:9,2:11:18.54:237,19,0
chr10	20681823	.	G	GT	3883.34	PASS	AB=0.867;AC=32;AF=0.571;AN=56;BaseQRankSum=13.775;DP=639;FS=36.206;HRun=7;HaplotypeScore=142.8348;InbreedingCoeff=0.7091;MQ=56.42;MQ0=19;MQRankSum=-11.775;QD=10.14;ReadPosRankSum=-2.001;VQSLOD=-0.4983;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:18,8:23:42.03:409,42,0	0/0:7,0:7:21.03:0,21,226	0/0:38,0:10:13.25:0,13,118	0/1:40,0:13:2.97:3,0,69	0/0:21,0:21:49.46:0,49,611	1/1:4,7:10:21.78:225,22,0	1/1:7,4:10:9.45:135,9,0	0/1:29,13:37:12.60:521,0,13	1/1:13,5:18:25.14:280,25,0	0/0:31,0:30:81.22:0,81,906	0/0:24,0:24:63.18:0,63,713	1/1:16,4:20:15.32:158,15,0	1/1:9,2:10:10.82:95,11,0	1/1:18,1:19:17.50:139,18,0	0/0:23,0:23:63.18:0,63,714	0/0:29,0:29:81.12:0,81,885	0/0:31,0:31:89.05:0,89,981	0/0:29,0:29:72.19:0,72,805	0/0:23,0:22:60.10:0,60,642	1/1:19,8:26:14.60:251,15,0	1/1:2,5:7:3:27,3,0	0/1:19,1:20:2.41:127,0,2	1/1:19,5:24:35.98:336,36,0	1/1:13,6:17:12.07:187,12,0	1/1:11,2:12:13.66:145,14,0	0/1:20,8:28:39.88:357,0,40	1/1:25,7:25:28.68:352,29,0	1/1:13,0:13:20.41:137,20,0
chr10	20682643	.	TG	T	10079.84	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=13.982;DP=596;FS=0.000;HRun=6;HaplotypeScore=76.4383;InbreedingCoeff=0.9986;MQ=87.05;MQ0=0;MQRankSum=-4.463;QD=27.84;ReadPosRankSum=3.309;VQSLOD=5.4103;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,38:39:99:1128,105,0	0/0:12,0:12:33.09:0,33,417	0/0:23,0:24:62.01:0,62,725	0/0:25,0:25:51.04:0,51,604	0/0:20,0:20:54.18:0,54,710	1/1:0,27:27:72.18:774,72,0	1/1:4,20:24:57.14:613,57,0	1/1:2,23:25:63.12:659,63,0	1/1:0,21:21:63.16:677,63,0	0/0:16,0:16:45.14:0,45,578	0/0:17,0:17:42.12:0,42,523	1/1:4,23:27:69.17:741,69,0	1/1:3,23:26:66.16:709,66,0	1/1:1,13:14:39.10:419,39,0	0/0:23,0:23:63.20:0,63,829	0/0:22,0:22:63.20:0,63,828	0/0:35,0:35:99:0,99,1281	0/0:22,0:22:63.20:0,63,829	0/0:18,0:18:42.14:0,42,551	1/1:1,14:15:33.08:354,33,0	1/1:1,21:22:57.14:613,57,0	1/1:1,14:15:39.10:419,39,0	1/1:2,10:12:30.01:308,30,0	1/1:1,36:37:93.23:1000,93,0	1/1:1,14:15:36.09:387,36,0	1/1:0,12:12:36.07:377,36,0	1/1:1,23:24:65.81:709,66,0	1/1:1,6:6:18.05:193,18,0
chr10	20683045	.	GAAAT	G	8723.87	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=14.018;DP=514;FS=38.608;HRun=0;HaplotypeScore=83.8408;InbreedingCoeff=0.9779;MQ=59.54;MQ0=10;MQRankSum=-1.224;QD=34.76;ReadPosRankSum=2.716;VQSLOD=2.9661;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,14:15:33.11:570,33,0	0/0:14,0:14:36.12:0,36,902	0/0:16,0:9:6.91:0,7,153	0/0:9,0:5:12.04:0,12,268	0/0:30,0:30:81.28:0,81,2021	1/1:0,11:11:27.09:467,27,0	1/1:1,12:13:24.08:415,24,0	1/1:4,9:11:24.08:395,24,0	1/1:0,13:13:30.10:518,30,0	0/0:45,0:44:99:0,117,2906	0/0:24,0:24:63.19:0,63,1461	1/1:0,8:8:21.07:363,21,0	1/1:2,15:17:36.12:622,36,0	1/1:2,10:12:24.08:414,24,0	0/0:26,0:26:69.24:0,69,1690	0/0:29,0:29:75.24:0,75,1792	0/0:18,0:18:48.16:0,48,1161	0/0:23,0:23:54.19:0,54,1354	0/0:29,0:28:75.26:0,75,1865	1/1:4,13:17:30.10:515,30,0	1/1:2,14:15:24.08:415,24,0	1/1:4,9:13:24.08:415,24,0	1/1:5,18:23:36.12:622,36,0	1/1:0,11:11:27.09:467,27,0	1/1:1,22:23:60.21:1037,60,0	1/1:7,17:24:51.10:781,51,0	1/1:2,8:10:15.05:243,15,0	1/1:1,11:11:27.09:466,27,0
chr10	20683156	.	G	GT	4322.21	PASS	AB=0.929;AC=9;AF=0.161;AN=56;BaseQRankSum=-10.815;DP=659;FS=17.766;HRun=1;HaplotypeScore=63.0509;InbreedingCoeff=0.8657;MQ=73.90;MQ0=0;MQRankSum=1.535;QD=35.43;ReadPosRankSum=1.964;VQSLOD=3.1575;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:75.22:0,75,1029	1/1:0,13:13:33.11:528,33,0	0/0:15,0:15:15.38:0,15,399	0/0:14,0:14:24.06:0,24,287	1/1:0,35:35:96.33:1535,96,0	0/0:29,0:28:81.27:0,81,1129	0/0:21,0:21:60.20:0,60,839	0/0:23,0:22:66.21:0,66,905	0/0:21,0:21:63.21:0,63,879	1/1:1,31:32:93.32:1475,93,0	1/1:0,16:16:48.16:767,48,0	0/0:33,0:33:99:0,99,1382	0/0:24,0:24:66.18:0,66,898	0/0:22,0:22:63.21:0,63,881	0/0:30,0:30:84.27:0,84,1158	0/0:22,0:22:66.22:0,66,923	0/0:28,0:28:84.28:0,84,1175	0/0:17,0:17:51.17:0,51,708	0/0:24,0:24:69.20:0,69,917	0/0:21,0:21:63.20:0,63,865	0/0:40,0:40:99:0,114,1595	0/0:14,0:14:39.13:0,39,545	0/0:24,0:24:69.22:0,69,933	0/0:34,0:34:99:0,99,1341	0/0:21,0:21:57.18:0,57,779	0/1:24,2:26:17.72:18,0,913	0/0:20,0:20:57.16:0,57,775	0/0:14,0:14:42.14:0,42,587
chr10	20683615	.	CT	C	5130.20	PASS	AB=0.936;AC=38;AF=0.679;AN=56;BaseQRankSum=8.997;DP=435;FS=8.143;HRun=11;HaplotypeScore=50.3663;InbreedingCoeff=0.6414;MQ=71.46;MQ0=0;MQRankSum=-2.154;QD=15.64;ReadPosRankSum=1.844;VQSLOD=5.0793;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,22:25:62.92:517,63,0	0/1:6,1:7:9.61:10,0,113	0/1:15,0:11:18.76:19,0,145	0/1:13,0:11:22.31:36,0,22	0/0:23,2:25:10.03:0,10,477	1/1:3,18:22:35.68:426,36,0	1/1:2,13:16:31.99:252,32,0	1/1:8,21:31:67.85:533,68,0	1/1:1,6:7:14.91:116,15,0	0/0:15,0:15:42.11:0,42,448	0/0:16,1:19:13.60:0,14,379	1/1:1,11:13:0.02:195,0,0	1/1:2,11:13:29.96:246,30,0	1/1:2,12:14:29.96:246,30,0	0/0:13,0:13:30.06:0,30,312	0/0:16,0:17:44.69:0,45,423	0/1:12,1:13:5.30:5,0,284	0/0:3,0:4:11.82:0,12,98	0/0:13,0:14:26.21:0,26,301	1/1:3,22:25:62.88:517,63,0	1/1:3,8:11:23.95:197,24,0	1/1:1,8:9:23.97:197,24,0	1/1:1,12:15:28.04:209,28,0	1/1:2,14:16:35.96:296,36,0	1/1:6,16:23:46.96:375,47,0	1/1:1,14:15:12.97:313,13,0	1/1:2,13:16:37.98:301,38,0	1/1:1,7:8:14.98:123,15,0
chr10	20683724	.	C	CT	7990.38	PASS	AB=1.000;AC=35;AF=0.625;AN=56;BaseQRankSum=-7.360;DP=498;FS=5.031;HRun=8;HaplotypeScore=59.5135;InbreedingCoeff=0.9219;MQ=65.32;MQ0=2;MQRankSum=-2.967;QD=27.09;ReadPosRankSum=1.553;VQSLOD=5.6467;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,30:38:80.55:942,81,0	0/0:5,0:5:12:0,12,110	0/0:18,0:13:19.78:0,20,159	0/0:14,0:10:15.48:0,15,121	0/0:22,0:22:51:0,51,461	1/1:1,15:16:45.13:519,45,0	1/1:4,9:13:27.08:312,27,0	1/1:4,29:33:87.21:980,87,0	1/1:1,13:14:39.12:450,39,0	0/0:20,0:20:54.03:0,54,494	0/0:24,0:24:72.03:0,72,655	1/1:1,12:13:36.11:415,36,0	1/1:3,10:13:30.09:346,30,0	1/1:2,12:12:33.10:381,33,0	0/0:24,0:24:69.03:0,69,632	0/0:17,0:17:45.02:0,45,412	0/0:31,0:31:80.80:0,81,736	0/1:8,0:7:7.97:8,0,119	0/0:27,0:27:66.03:0,66,601	1/1:0,10:10:27.08:312,27,0	1/1:6,6:12:13.18:170,13,0	1/1:2,9:11:21.06:242,21,0	1/1:4,15:19:45.13:518,45,0	1/1:0,9:8:21.06:240,21,0	1/1:2,14:16:45.09:504,45,0	1/1:2,19:21:57.15:647,57,0	1/1:1,20:21:51.15:589,51,0	1/1:1,13:14:36.11:415,36,0
chr10	20683780	.	T	TGCGCTTGCTAGGCAAGC	26032.53	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=2.274;DP=505;FS=10.065;HRun=0;HaplotypeScore=205.2267;InbreedingCoeff=0.9385;MQ=58.50;MQ0=7;MQRankSum=-12.709;QD=103.30;ReadPosRankSum=-0.669;VQSLOD=3.6773;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:26,2:28:50.60:2285,51,0	0/0:5,0:5:15.03:0,15,464	0/0:45,0:20:48.08:0,48,1624	0/0:30,0:16:16.69:0,17,957	0/0:20,0:20:51.18:0,51,2342	1/1:11,2:13:24.08:1253,24,0	1/1:5,5:17:6.02:396,6,0	1/1:21,0:19:24.07:1061,24,0	1/1:10,3:13:27.09:1864,27,0	0/0:27,0:27:81.28:0,81,3815	0/0:16,0:16:42.13:0,42,1818	1/1:17,9:27:69.24:4550,69,0	1/1:10,9:24:48.15:3100,48,0	1/1:8,5:11:24.08:1424,24,0	0/0:28,0:28:84.26:0,84,3588	0/0:20,0:20:57.20:0,57,2683	0/0:25,0:25:75.26:0,75,3570	0/0:13,0:14:32.80:0,33,1469	0/0:22,0:22:63.19:0,63,2331	1/1:3,0:3:3.01:143,3,0	1/1:9,0:9:17.85:682,18,0	1/1:5,2:7:12:548,12,0	1/1:6,1:7:8.95:404,9,0	1/1:11,2:11:23.79:1101,24,0	1/1:7,0:9:21.06:889,21,0	1/1:7,6:14:33.11:2441,33,0	1/1:18,6:26:48.05:2967,48,0	1/1:6,2:8:15.05:926,15,0
chr10	20684115	.	GCCTAGCAAGCGC	G	14713.95	PASS	AB=0.569;AC=29;AF=0.558;AN=52;BaseQRankSum=10.900;DP=247;FS=160.250;HRun=0;HaplotypeScore=99.9942;InbreedingCoeff=0.6515;MQ=38.70;MQ0=18;MQRankSum=-9.660;QD=98.75;ReadPosRankSum=2.974;VQSLOD=1.6525;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,3:3:9.03:356,9,0	0/0:3,0:3:9.03:0,9,565	0/0:5,0:2:2.98:0,3,22	./.	0/0:6,0:5:9.03:0,9,453	1/1:0,9:9:21.07:709,21,0	0/1:2,8:9:86.21:807,0,86	1/1:1,18:18:51.13:1870,51,0	1/1:0,13:13:33.11:1306,33,0	0/0:12,0:12:30.10:0,30,1590	0/0:5,0:5:9.03:0,9,476	1/1:0,16:16:45.15:1781,45,0	1/1:0,11:11:30.10:1187,30,0	0/1:1,9:10:99:1039,0,124	0/0:9,0:9:27.09:0,27,1693	0/0:15,0:15:33.10:0,33,1762	0/0:11,0:11:33.11:0,33,2067	0/0:9,0:9:27.09:0,27,1691	0/0:12,0:10:30.07:0,30,1218	./.	1/1:1,2:2:6.02:237,6,0	1/1:1,1:1:3.01:119,3,0	1/1:0,5:5:12.04:349,12,0	0/1:2,3:5:99:225,0,292	1/1:1,4:4:12.04:475,12,0	1/1:0,15:15:45.15:1760,45,0	1/1:0,16:16:48.16:1900,48,0	1/1:0,7:7:15.05:594,15,0
chr10	20685161	.	TTGTTTAAAC	T	12328.85	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=12.564;DP=398;FS=0.877;HRun=0;HaplotypeScore=124.7427;InbreedingCoeff=0.9592;MQ=65.15;MQ0=1;MQRankSum=-13.068;QD=58.99;ReadPosRankSum=1.314;VQSLOD=4.7100;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,10:15:21.07:615,21,0	0/0:8,0:8:21.07:0,21,845	0/0:5,0:5:8.94:0,9,127	0/0:10,0:10:20.52:0,21,427	0/0:25,0:25:63.22:0,63,2965	1/1:1,17:18:42.14:1231,42,0	1/1:2,7:9:18.06:527,18,0	1/1:7,17:24:51.14:1144,51,0	1/1:3,7:10:18.06:527,18,0	0/0:25,0:25:66.23:0,66,2997	0/0:21,0:21:48.16:0,48,2131	1/1:2,6:8:21.07:615,21,0	1/1:1,9:10:27.09:791,27,0	1/1:0,6:6:18.06:527,18,0	0/0:23,0:23:69.24:0,69,3216	0/0:20,0:20:51.18:0,51,2389	0/0:17,0:17:48.16:0,48,2048	0/0:19,0:19:42.11:0,42,1810	0/0:16,0:16:42.14:0,42,1895	1/1:4,9:13:27.06:724,27,0	1/1:2,5:7:15.05:440,15,0	1/1:1,10:11:27.09:791,27,0	1/1:2,13:15:39.13:1143,39,0	1/1:1,4:5:6.02:176,6,0	1/1:5,13:18:39.13:1143,39,0	1/1:6,7:13:21.07:615,21,0	1/1:5,13:18:36.12:1055,36,0	1/1:6,3:8:9.03:264,9,0
chr10	20685500	.	TA	T	14870.25	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=13.505;DP=686;FS=0.602;HRun=2;HaplotypeScore=70.0405;InbreedingCoeff=0.9995;MQ=82.73;MQ0=0;MQRankSum=-5.658;QD=34.82;ReadPosRankSum=3.354;VQSLOD=5.3382;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,39:39:99:1401,108,0	0/0:9,0:9:24.03:0,24,314	0/0:26,0:25:69.20:0,69,990	0/0:33,0:33:76.69:0,77,1284	0/0:35,0:35:99:0,102,1524	1/1:1,20:21:51.17:662,51,0	1/1:0,16:16:48.16:623,48,0	1/1:0,24:24:72.23:932,72,0	1/1:0,28:28:84.27:1090,84,0	0/0:24,0:24:71.90:0,72,1027	0/0:18,0:18:54.18:0,54,809	1/1:0,31:31:84.27:1091,84,0	1/1:0,16:16:45.15:584,45,0	1/1:0,25:25:60.20:779,60,0	0/0:19,0:19:57.19:0,57,852	0/0:22,0:22:66.22:0,66,988	0/0:35,0:35:99:0,99,1463	0/0:18,0:18:45.14:0,45,652	0/0:20,0:20:60.20:0,60,899	1/1:0,22:22:63.17:799,63,0	1/1:0,50:50:99:1869,144,0	1/1:1,17:18:48.16:622,48,0	1/1:1,18:19:47.99:623,48,0	1/1:1,24:25:66.21:857,66,0	1/1:1,24:25:57.19:739,57,0	1/1:1,22:23:66.15:797,66,0	1/1:0,29:29:81.14:1051,81,0	1/1:0,16:16:27.09:351,27,0
chr10	20686189	.	C	CTT	423.04	PASS	AB=0.945;AC=23;AF=0.411;AN=56;BaseQRankSum=0.483;DP=372;FS=5.218;HRun=18;HaplotypeScore=182.3717;InbreedingCoeff=0.2047;MQ=59.78;MQ0=14;MQRankSum=-2.356;QD=1.84;ReadPosRankSum=-2.119;VQSLOD=-0.4415;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:20,0:20:0.10:0,0,2	0/0:8,0:10:13.95:0,14,78	0/0:23,0:11:2.48:0,2,19	0/1:12,0:9:4.10:4,0,20	0/0:13,0:16:17.45:0,17,131	1/1:10,0:10:2.36:5,2,0	0/1:7,0:7:0.09:0,0,3	1/1:10,0:8:0.94:3,1,0	0/1:10,0:10:0.63:2,0,1	0/1:9,0:12:7.14:7,0,34	0/1:16,0:16:0.79:1,0,66	1/1:7,0:7:0.72:1,1,0	0/0:7,0:7:1.63:0,2,5	0/0:7,0:7:2.12:0,2,6	0/0:21,0:22:26.48:0,26,219	0/1:8,8:16:21.44:56,0,21	0/1:18,8:29:10.66:86,0,11	1/1:8,4:13:5.16:200,5,0	1/1:15,2:24:14.66:167,15,0	0/1:13,0:13:0.80:1,0,1	0/0:11,0:9:1.61:0,2,5	0/1:8,0:8:0.42:0,0,2	0/0:10,0:10:1.03:0,1,8	0/1:10,0:10:1.10:4,0,1	1/1:7,0:7:2.18:5,2,0	0/0:11,0:11:1.83:0,2,11	0/0:16,0:15:0.02:0,0,2	0/0:6,0:6:2.02:0,2,5
chr10	20686343	.	T	TTGA	17744.04	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=8.633;DP=548;FS=1.526;HRun=0;HaplotypeScore=113.6437;InbreedingCoeff=0.9820;MQ=66.37;MQ0=2;MQRankSum=-9.945;QD=53.29;ReadPosRankSum=1.427;VQSLOD=6.5190;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,42:44:93.32:2092,93,0	0/0:7,0:7:18.06:0,18,296	0/0:17,0:15:31.92:0,32,479	0/0:18,0:17:39.10:0,39,589	0/0:16,0:16:45.15:0,45,738	1/1:0,17:19:45.15:1019,45,0	1/1:2,20:22:51.17:1120,51,0	1/1:3,18:21:60.17:1213,60,0	1/1:0,18:19:48.16:1084,48,0	0/0:15,0:15:36.11:0,36,554	0/0:18,0:18:48.15:0,48,768	1/1:0,16:17:48.16:1083,48,0	1/1:0,19:20:54.19:1219,54,0	1/1:0,18:18:45.15:1016,45,0	0/0:25,0:25:72.25:0,72,1196	0/0:25,0:25:69.24:0,69,1149	0/0:44,0:44:99:0,123,2009	0/0:19,0:19:57.16:0,57,898	0/0:11,0:11:33.10:0,33,502	1/1:3,22:25:57.20:1285,57,0	1/1:1,9:11:18.06:407,18,0	1/1:1,8:9:21.07:475,21,0	1/1:1,16:17:36.05:812,36,0	1/1:2,14:17:39.13:850,39,0	1/1:3,15:18:48.16:1069,48,0	1/1:5,12:18:45.14:904,45,0	1/1:4,31:35:90.25:1959,90,0	1/1:0,2:2:6.02:136,6,0
chr10	20687394	.	TAGAGCTGTGCTAC	T	19517.12	PASS	AB=0.564;AC=33;AF=0.589;AN=56;BaseQRankSum=16.650;DP=735;FS=4.413;HRun=0;HaplotypeScore=278.2268;InbreedingCoeff=0.9134;MQ=80.61;MQ0=0;MQRankSum=-15.171;QD=46.25;ReadPosRankSum=2.049;VQSLOD=4.2776;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:20,23:43:36.12:1342,36,0	0/0:11,0:11:24.08:0,24,1362	0/0:23,0:25:22.32:0,22,685	0/0:34,0:34:34.36:0,34,1516	0/0:28,0:28:72.25:0,72,4302	1/1:8,12:20:27.09:1007,27,0	1/1:15,5:20:12.04:448,12,0	1/1:25,7:32:21.06:412,21,0	1/1:8,17:25:48.16:1787,48,0	0/0:37,0:37:81.28:0,81,4713	0/0:31,0:31:78.27:0,78,4609	1/1:9,14:23:36.12:1342,36,0	1/1:10,18:28:42.14:1566,42,0	1/1:9,21:30:54.19:2011,54,0	0/0:42,0:42:99:0,105,6192	0/0:33,0:33:75.26:0,75,4508	0/0:26,0:26:57.20:0,57,3436	0/0:16,0:16:39.13:0,39,2160	0/0:30,0:30:57.19:0,57,2729	1/1:7,19:26:27.09:1007,27,0	1/1:18,14:32:15.05:553,15,0	1/1:5,8:13:18.06:671,18,0	1/1:5,13:18:29.76:1119,30,0	1/1:14,10:24:15.05:559,15,0	1/1:8,19:27:39.61:1455,40,0	0/1:7,24:31:99:2562,0,115	1/1:9,12:21:27.09:1007,27,0	1/1:1,8:9:18.06:668,18,0
chr10	20687879	.	TTAG	T	9508.38	PASS	AB=0.526;AC=33;AF=0.589;AN=56;BaseQRankSum=15.658;DP=510;FS=168.675;HRun=0;HaplotypeScore=76.3777;InbreedingCoeff=0.9145;MQ=78.72;MQ0=0;MQRankSum=-8.742;QD=42.07;ReadPosRankSum=2.300;VQSLOD=1.0294;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,9:10:21.07:342,21,0	0/0:16,0:16:45.15:0,45,1005	0/0:20,0:20:57.19:0,57,1173	0/0:7,0:7:18.01:0,18,317	0/0:33,0:33:93.29:0,93,1949	1/1:1,10:11:30.10:490,30,0	1/1:0,10:10:30.06:460,30,0	1/1:1,28:29:84.23:1256,84,0	1/1:0,8:8:21.07:343,21,0	0/0:43,0:43:99:0,123,2720	0/0:30,0:30:81.28:0,81,1808	1/1:1,12:13:36.12:587,36,0	1/1:2,15:17:42.14:685,42,0	1/1:0,17:17:42.14:686,42,0	0/0:35,0:35:96.25:0,96,2053	0/0:45,0:45:99:0,123,2712	0/0:31,0:31:90.31:0,90,2001	0/0:15,0:15:45.15:0,45,1004	0/0:9,0:9:27.08:0,27,550	1/1:1,18:19:48.16:783,48,0	1/1:0,4:4:12.04:196,12,0	1/1:0,18:18:48.16:783,48,0	1/1:0,10:10:27.09:440,27,0	1/1:0,4:4:12.04:196,12,0	1/1:1,9:10:24.08:392,24,0	0/1:2,18:20:76.87:745,0,77	1/1:2,14:16:39.13:636,39,0	1/1:0,10:10:30.10:489,30,0
chr10	20689210	.	ATTTAATT	A	2736.80	PASS	AB=1.000;AC=28;AF=0.500;AN=56;BaseQRankSum=1.593;DP=353;FS=5.774;HRun=0;HaplotypeScore=64.0044;InbreedingCoeff=0.6126;MQ=69.11;MQ0=16;MQRankSum=1.633;QD=19.27;ReadPosRankSum=3.517;VQSLOD=1.9181;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:16,1:16:11.97:163,12,0	0/1:7,0:7:31.05:31,0,198	0/0:38,0:13:21.39:0,21,290	0/0:41,0:12:21.15:0,21,235	0/0:17,0:17:39.57:0,40,649	1/1:3,6:10:6.02:124,6,0	1/1:3,0:2:3.01:47,3,0	1/1:24,0:24:55.96:712,56,0	1/1:9,0:8:16.52:230,17,0	0/0:13,0:13:29.80:0,30,483	0/0:12,0:12:22.25:0,22,373	1/1:3,4:7:4.72:82,5,0	1/1:9,0:9:26.92:378,27,0	1/1:2,0:2:2.07:45,2,0	0/0:8,0:8:15.01:0,15,325	0/0:11,0:10:21.04:0,21,390	0/0:22,0:20:45.21:0,45,713	0/0:10,0:8:21.04:0,21,383	0/0:20,0:18:36.56:0,37,659	1/1:1,10:10:29.29:407,29,0	1/1:3,0:3:2.14:44,2,0	1/1:2,0:2:3.01:47,3,0	0/0:9,0:8:1.67:0,2,4	0/0:1,0:2:0.47:0,0,1	1/1:11,0:11:8.18:88,8,0	0/1:14,0:14:68.98:440,0,69	0/0:8,0:8:0:0,0,0	1/1:11,0:11:4.69:87,5,0
chr10	20689212	.	TTAA	T	2788.25	PASS	AB=1.000;AC=32;AF=0.571;AN=56;BaseQRankSum=-1.590;DP=366;FS=0.591;HRun=0;HaplotypeScore=44.8174;InbreedingCoeff=0.6279;MQ=63.33;MQ0=27;MQRankSum=0.017;QD=16.70;ReadPosRankSum=-0.681;VQSLOD=2.8386;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:17:12.04:157,12,0	0/1:7,0:7:31.09:31,0,151	0/0:39,0:11:21.12:0,21,198	0/0:41,0:11:17.39:0,17,198	0/0:17,0:17:36.40:0,36,495	1/1:8,0:8:6.02:85,6,0	1/1:4,0:2:3.01:37,3,0	1/1:23,0:22:61.04:772,61,0	1/1:10,0:8:16.41:223,16,0	0/0:13,0:13:16.48:0,16,291	0/0:13,0:12:12.72:0,13,220	1/1:9,0:8:6.49:86,6,0	1/1:9,0:9:27.09:397,27,0	1/1:4,0:2:3.01:47,3,0	0/0:11,0:11:14.96:0,15,232	0/0:9,0:8:21.07:0,21,298	0/0:24,0:21:34.31:0,34,519	0/0:11,0:9:24.02:0,24,291	0/0:19,0:16:13.40:0,13,467	1/1:11,0:10:29.89:373,30,0	1/1:3,0:3:3.48:47,3,0	1/1:2,0:2:3.01:47,3,0	1/1:5,4:8:3.01:52,3,0	0/0:2,0:2:0.47:0,0,1	1/1:11,0:11:9.45:91,9,0	0/1:16,0:15:17.77:444,0,18	1/1:9,0:8:0.47:1,0,0	1/1:13,0:11:7.44:93,7,0
chr10	20689213	.	TAA	T	2775.15	PASS	AB=0.852;AC=33;AF=0.589;AN=56;BaseQRankSum=-1.371;DP=380;FS=0.000;HRun=2;HaplotypeScore=40.0028;InbreedingCoeff=0.5660;MQ=60.21;MQ0=43;MQRankSum=-1.355;QD=14.38;ReadPosRankSum=-1.823;VQSLOD=0.0901;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,16:16:12.04:149,12,0	0/1:6,0:6:31.17:31,0,146	0/0:39,0:10:15.73:0,16,165	0/0:44,0:11:17.46:0,17,198	0/0:17,1:17:23.27:0,23,447	1/1:8,0:8:6.02:72,6,0	1/1:4,0:2:3.01:44,3,0	1/1:19,6:23:61.35:783,61,0	1/1:9,1:8:18.27:233,18,0	0/0:15,0:13:14.26:0,14,252	0/0:13,0:11:4.65:0,5,187	1/1:8,2:9:6.49:68,6,0	1/1:9,0:9:27.09:398,27,0	1/1:5,0:2:3.01:47,3,0	0/0:10,0:10:14.99:0,15,225	0/0:9,0:8:21.07:0,21,277	0/0:25,0:21:32.10:0,32,481	0/0:12,0:9:23.97:0,24,253	0/1:19,0:16:5.15:5,0,433	1/1:12,0:10:29.93:368,30,0	1/1:3,0:3:3.90:48,4,0	1/1:3,0:3:3.01:47,3,0	1/1:5,0:4:3.01:40,3,0	0/0:2,0:2:0.47:0,0,1	1/1:4,9:12:9.45:91,9,0	0/1:3,12:14:8.08:444,0,8	1/1:2,8:9:0.43:1,0,0	1/1:9,8:11:7.08:93,7,0
chr10	20690116	.	T	TA	11189.03	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-16.017;DP=538;FS=2.844;HRun=5;HaplotypeScore=46.4415;InbreedingCoeff=0.9732;MQ=68.41;MQ0=0;MQRankSum=-0.073;QD=34.75;ReadPosRankSum=-0.093;VQSLOD=4.8066;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,19:20:51.12:651,51,0	0/0:10,0:10:30.08:0,30,322	0/0:8,0:8:20.94:0,21,202	0/0:2,0:2:3.01:0,3,32	0/0:29,0:29:78.20:0,78,838	1/1:2,16:18:45.15:592,45,0	1/1:0,12:12:27.09:355,27,0	1/1:4,28:32:84.24:1064,84,0	1/1:1,14:15:42.14:553,42,0	0/0:41,0:41:99:0,114,1224	0/0:30,0:30:84.21:0,84,902	1/1:0,23:23:63.20:829,63,0	1/1:1,18:19:51.17:670,51,0	1/1:0,20:21:63.20:818,63,0	0/0:28,0:28:84.21:0,84,903	0/0:22,0:22:60.15:0,60,645	0/0:11,0:11:33.06:0,33,344	0/0:15,0:15:42.10:0,42,451	0/0:20,0:20:54.13:0,54,580	1/1:3,29:32:81.26:1066,81,0	1/1:0,11:11:30.10:395,30,0	1/1:1,13:14:36.12:474,36,0	1/1:2,20:22:60.20:789,60,0	1/1:2,7:9:21.07:276,21,0	1/1:0,12:12:30.10:395,30,0	1/1:1,29:30:87.26:1115,87,0	1/1:1,20:20:57.17:750,57,0	1/1:0,11:11:30.57:396,31,0
chr10	20691426	.	T	TCA	24422.75	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-11.645;DP=728;FS=2.190;HRun=0;HaplotypeScore=75.5870;InbreedingCoeff=0.9939;MQ=88.55;MQ0=2;MQRankSum=-8.644;QD=38.16;ReadPosRankSum=5.491;VQSLOD=6.8183;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:10,31:41:81.28:1346,81,0	1/1:4,6:10:17.82:299,18,0	0/0:31,0:30:66.19:0,66,815	0/0:28,0:27:56.87:0,57,703	1/1:7,24:31:69.23:1131,69,0	1/1:2,30:32:78.27:1297,78,0	1/1:3,26:29:63.22:1047,63,0	1/1:6,41:47:99:2003,123,0	1/1:3,15:18:45.15:748,45,0	1/1:3,25:28:75.26:1230,75,0	1/1:4,26:30:75.26:1246,75,0	1/1:1,16:17:42.14:698,42,0	1/1:7,22:29:53.96:885,54,0	1/1:4,15:19:45.15:747,45,0	0/0:29,0:29:78.25:0,78,984	1/1:5,26:31:69.24:1147,69,0	1/1:2,26:27:69.24:1147,69,0	1/1:4,13:17:30.10:499,30,0	1/1:9,13:21:45.15:723,45,0	1/1:7,27:34:81.28:1327,81,0	1/1:2,15:17:45.15:748,45,0	1/1:5,23:28:66.23:1096,66,0	1/1:6,23:29:57.19:948,57,0	1/1:5,22:27:63.22:1048,63,0	1/1:2,13:15:42.14:683,42,0	1/1:3,28:31:47.85:1284,48,0	1/1:6,17:24:48.16:798,48,0	1/1:0,6:6:18.06:299,18,0
chr10	20691697	.	CCA	C	15812.94	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=15.410;DP=727;FS=0.292;HRun=0;HaplotypeScore=90.7059;InbreedingCoeff=0.9988;MQ=73.16;MQ0=4;MQRankSum=-3.638;QD=35.38;ReadPosRankSum=2.447;VQSLOD=6.7476;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,36:39:99:1428,102,0	0/0:17,0:17:48.16:0,48,859	0/0:14,0:13:33.11:0,33,584	0/0:24,0:23:54.15:0,54,919	0/0:38,0:37:99:0,111,1980	1/1:0,15:15:45.15:630,45,0	1/1:3,18:21:48.16:672,48,0	1/1:1,29:30:84.28:1175,84,0	1/1:1,16:17:48.16:672,48,0	0/0:35,0:35:99:0,99,1717	0/0:25,0:25:75.21:0,75,1254	1/1:1,31:31:84.28:1171,84,0	1/1:4,28:31:66.22:924,66,0	1/1:0,23:23:66.22:924,66,0	0/0:36,0:36:99:0,108,1945	0/0:35,0:35:99:0,105,1849	0/0:22,0:22:66.23:0,66,1174	0/0:16,0:16:42.14:0,42,756	0/0:18,0:18:48.15:0,48,837	1/1:0,33:33:90.30:1259,90,0	1/1:2,29:31:75.25:1050,75,0	1/1:4,28:31:69.23:965,69,0	1/1:0,22:21:54.18:756,54,0	1/1:1,31:32:84.28:1176,84,0	1/1:0,28:28:60.20:839,60,0	1/1:2,24:26:21.20:952,21,0	1/1:1,26:27:66.22:924,66,0	1/1:0,7:7:21.07:294,21,0
chr10	20691969	.	CT	C	11501.50	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=13.794;DP=678;FS=1.316;HRun=6;HaplotypeScore=79.2683;InbreedingCoeff=0.9948;MQ=84.23;MQ0=0;MQRankSum=-7.130;QD=27.38;ReadPosRankSum=2.532;VQSLOD=5.5248;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,32:34:87.21:935,87,0	0/0:9,0:9:27.09:0,27,355	0/0:21,0:21:45.14:0,45,576	0/0:23,0:23:54.14:0,54,664	0/0:35,0:35:99:0,105,1364	1/1:4,26:30:75.18:806,75,0	1/1:8,15:23:51.11:539,51,0	1/1:2,41:43:99:1314,123,0	1/1:3,23:26:66.16:709,66,0	0/0:29,0:29:81.24:0,81,1039	0/0:20,0:20:57.17:0,57,735	1/1:3,16:19:48.11:508,48,0	1/1:1,24:25:63.15:677,63,0	1/1:4,14:18:45.11:483,45,0	0/0:32,0:32:90.29:0,90,1182	0/0:33,1:34:67.07:0,67,1229	0/0:20,0:20:60.20:0,60,789	0/0:17,0:17:48.10:0,48,596	0/0:18,0:18:54.18:0,54,711	1/1:5,22:27:72.16:764,72,0	1/1:0,18:18:48.12:516,48,0	1/1:5,20:25:63.13:661,63,0	1/1:3,21:24:57.12:604,57,0	1/1:1,10:11:21.05:226,21,0	1/1:4,21:25:60.15:645,60,0	1/1:2,36:38:99:1149,108,0	1/1:1,28:29:78.19:838,78,0	1/1:1,4:5:12.03:128,12,0
chr10	20692039	.	A	ATAC	23078.78	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-14.046;DP=747;FS=0.296;HRun=0;HaplotypeScore=113.8092;InbreedingCoeff=0.9992;MQ=79.18;MQ0=0;MQRankSum=-5.250;QD=48.48;ReadPosRankSum=2.292;VQSLOD=7.1039;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,24:30:63.19:1361,63,0	0/0:13,0:13:36.12:0,36,600	0/0:21,0:21:54.18:0,54,843	0/0:22,0:22:56.50:0,57,832	0/0:40,0:40:99:0,108,1796	1/1:10,28:38:72.16:1505,72,0	1/1:3,19:22:51.18:1143,51,0	1/1:14,27:43:99:2191,102,0	1/1:5,20:25:63.22:1426,63,0	0/0:32,0:32:90.30:0,90,1475	0/0:16,0:16:48.16:0,48,797	1/1:2,23:25:57.19:1260,57,0	1/1:5,23:30:69.24:1558,69,0	1/1:1,34:35:81.28:1834,81,0	0/0:31,0:31:90.31:0,90,1499	0/0:46,0:46:99:0,129,2132	0/0:21,0:21:60.20:0,60,988	0/0:10,0:10:30.10:0,30,500	0/0:19,0:19:57.19:0,57,936	1/1:4,22:27:45.03:1018,45,0	1/1:2,18:20:48.16:1087,48,0	1/1:4,24:28:63.22:1425,63,0	1/1:3,22:25:45.15:1019,45,0	1/1:2,14:17:27.09:612,27,0	1/1:4,21:26:51.18:1155,51,0	1/1:12,26:38:75.50:2154,76,0	1/1:7,29:40:84.74:1857,85,0	1/1:0,7:7:21.07:475,21,0
chr10	20693260	.	TTCCC	T	2795.61	PASS	AC=16;AF=0.320;AN=50;BaseQRankSum=1.309;DP=277;FS=6.100;HRun=0;HaplotypeScore=52.0399;InbreedingCoeff=0.6930;MQ=85.69;MQ0=0;MQRankSum=-0.050;QD=27.41;ReadPosRankSum=4.166;VQSLOD=2.4951;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:12.50:0,12,156	1/1:1,6:7:12.04:197,12,0	0/0:15,0:14:12.03:0,12,211	0/0:19,0:17:14.19:0,14,226	1/1:3,11:14:24.04:364,24,0	0/0:3,0:3:3.01:0,3,50	0/0:8,0:8:3.01:0,3,47	0/0:9,0:9:1.25:0,1,3	0/0:4,0:4:6.02:0,6,111	1/1:5,15:20:45.15:715,45,0	1/1:2,5:7:9.03:147,9,0	0/0:6,0:6:3.01:0,3,49	0/0:7,0:7:12:0,12,192	0/0:11,0:11:4.26:0,4,55	0/0:20,0:20:37.36:0,37,809	1/1:4,11:15:30.10:491,30,0	1/1:7,15:22:39.13:625,39,0	1/1:2,6:8:15.05:246,15,0	1/1:5,4:9:12.04:186,12,0	0/0:4,0:4:3.01:0,3,39	0/0:13,0:14:6.02:0,6,88	./.	./.	0/0:14,0:14:6.02:0,6,104	0/0:6,0:6:6.02:0,6,112	0/0:4,0:4:3.01:0,3,37	0/0:3,0:3:9.03:0,9,145	./.
chr10	20693429	.	C	CT	8306.31	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-14.133;DP=454;FS=35.404;HRun=5;HaplotypeScore=40.0304;InbreedingCoeff=0.9961;MQ=75.14;MQ0=0;MQRankSum=-0.414;QD=32.96;ReadPosRankSum=-1.209;VQSLOD=2.1215;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,24:28:72.23:947,72,0	0/0:7,0:7:21.05:0,21,225	0/0:8,0:8:24.03:0,24,241	0/0:13,0:13:27:0,27,284	0/0:20,0:20:57.14:0,57,613	1/1:1,12:13:33.11:434,33,0	1/1:3,13:16:36.12:474,36,0	1/1:2,13:15:39.12:499,39,0	1/1:1,15:16:39.13:513,39,0	0/0:37,0:37:99:0,102,1093	0/0:18,0:18:48.11:0,48,508	1/1:0,7:7:18.06:237,18,0	1/1:2,9:11:24.08:316,24,0	1/1:1,16:17:45.15:592,45,0	0/0:22,0:22:63.14:0,63,668	0/0:28,0:28:81.19:0,81,863	0/0:19,0:19:54.11:0,54,570	0/0:19,0:19:54.14:0,54,580	0/0:11,0:11:30.07:0,30,322	1/1:1,14:15:36.12:474,36,0	1/1:3,10:13:30.10:395,30,0	1/1:1,11:12:33.06:415,33,0	1/1:1,8:9:21.07:276,21,0	1/1:1,13:14:36.12:473,36,0	1/1:0,21:21:63.20:829,63,0	1/1:3,15:18:45.12:564,45,0	1/1:3,15:18:45.15:592,45,0	1/1:2,7:9:21.07:276,21,0
chr10	20694175	.	CGTGT	C	5805.97	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=3.254;DP=364;FS=47.515;HRun=0;HaplotypeScore=74.2705;InbreedingCoeff=0.8293;MQ=79.39;MQ0=0;MQRankSum=-9.031;QD=23.22;ReadPosRankSum=3.261;VQSLOD=2.7938;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,6:10:6.02:115,6,0	1/1:2,0:2:2.80:13,3,0	0/0:17,0:16:36.07:0,36,932	0/0:17,0:16:42.04:0,42,983	0/0:7,0:7:0.82:0,1,4	1/1:17,2:19:30.10:482,30,0	1/1:13,1:14:27.09:414,27,0	1/1:11,16:27:60.20:1106,60,0	1/1:20,1:21:36.12:582,36,0	0/0:11,0:15:24.55:0,25,134	0/0:15,0:16:18.10:0,18,120	1/1:11,1:12:18.53:288,19,0	1/1:11,1:13:15.05:234,15,0	1/1:21,1:22:30.10:488,30,0	0/0:18,0:18:42.14:0,42,1099	0/0:3,0:3:5.18:0,5,26	0/0:9,0:9:22.16:0,22,160	0/0:3,0:3:2.50:0,2,9	0/0:2,0:9:16.36:0,16,81	1/1:13,1:14:15.05:256,15,0	1/1:15,1:16:5.93:92,6,0	1/1:7,1:8:15.05:239,15,0	1/1:9,1:10:12.04:194,12,0	1/1:10,1:11:12.04:195,12,0	1/1:8,3:11:9.03:132,9,0	1/1:16,0:16:9.91:260,10,0	1/1:14,1:15:30.10:487,30,0	1/1:9,0:9:15.05:228,15,0
chr10	20694176	.	GTGTGT	G	5479.66	PASS	AB=0.969;AC=32;AF=0.571;AN=56;BaseQRankSum=2.544;DP=351;FS=41.835;HRun=0;HaplotypeScore=77.8998;InbreedingCoeff=0.6940;MQ=80.09;MQ0=0;MQRankSum=-9.754;QD=23.12;ReadPosRankSum=5.380;VQSLOD=2.3520;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,0:8:6.02:78,6,0	0/0:2,0:2:2.22:0,2,7	0/0:15,0:16:39.05:0,39,1176	0/0:17,0:16:42.14:0,42,1219	0/0:7,0:7:11.70:0,12,69	1/1:18,0:18:9.11:444,9,0	1/1:11,2:13:27.09:482,27,0	1/1:25,0:25:0.14:649,0,0	1/1:20,1:21:14.13:613,14,0	0/0:16,0:16:45.04:0,45,482	0/0:12,0:14:26.74:0,27,310	1/1:10,1:12:18.95:320,19,0	0/1:11,0:11:5.94:238,0,6	1/1:21,1:23:10.10:433,10,0	0/0:18,0:18:42.14:0,42,1325	0/0:3,0:3:6.01:0,6,70	0/0:9,0:9:24.06:0,24,312	0/0:2,0:2:2.98:0,3,22	0/0:9,0:9:27.01:0,27,276	1/1:13,0:13:15.05:196,15,0	1/1:16,0:16:5.89:97,6,0	1/1:7,0:8:15.05:219,15,0	1/1:9,0:9:11.94:192,12,0	1/1:10,1:11:12.04:205,12,0	1/1:8,2:10:9.03:199,9,0	0/1:14,0:15:33.27:302,0,33	1/1:14,1:15:30.10:520,30,0	1/1:9,0:9:15.05:291,15,0
chr10	20694177	.	TGTGTC	T	7301.50	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-1.165;DP=329;FS=49.261;HRun=0;HaplotypeScore=68.2686;InbreedingCoeff=0.8357;MQ=81.68;MQ0=0;MQRankSum=-8.890;QD=32.45;ReadPosRankSum=4.768;VQSLOD=2.7008;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,0:6:6.02:115,6,0	1/1:2,0:2:0.89:2,1,0	0/0:18,0:17:42.07:0,42,1072	0/0:17,0:16:42.11:0,42,1079	1/1:7,0:7:0.92:2,1,0	1/1:2,13:16:30.10:651,30,0	1/1:3,8:13:27.09:598,27,0	1/1:19,2:23:60.19:1129,60,0	1/1:2,17:19:36.12:772,36,0	0/0:16,0:16:30.74:0,31,209	0/0:12,0:13:18.77:0,19,128	1/1:3,9:12:18.95:405,19,0	1/1:1,9:10:15.05:310,15,0	1/1:4,14:21:29.85:598,30,0	0/0:18,0:18:42.14:0,42,1088	0/0:3,0:3:5.18:0,5,26	0/0:10,0:10:25.46:0,25,271	0/0:2,0:2:2.88:0,3,15	0/0:7,0:7:18.69:0,19,120	1/1:1,8:10:15.05:285,15,0	1/1:1,12:15:6.02:121,6,0	1/1:2,2:8:15.05:280,15,0	1/1:1,6:8:11.94:246,12,0	1/1:2,7:10:12.04:265,12,0	1/1:5,3:8:9.03:201,9,0	1/1:3,3:13:9.90:346,10,0	1/1:2,12:15:30.10:650,30,0	1/1:0,8:9:15.05:327,15,0
chr10	20694179	.	TGTC	T	4024.91	PASS	AB=0.600;AC=49;AF=0.875;AN=56;BaseQRankSum=5.223;DP=325;FS=32.936;HRun=0;HaplotypeScore=70.1124;InbreedingCoeff=0.6259;MQ=79.49;MQ0=0;MQRankSum=-7.719;QD=14.80;ReadPosRankSum=2.416;VQSLOD=1.4627;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,0:6:5.94:41,6,0	1/1:0,3:3:3.01:54,3,0	0/0:17,0:16:39.11:0,39,660	0/0:17,0:16:18.72:0,19,649	1/1:1,6:7:12.02:162,12,0	1/1:16,0:16:29.94:254,30,0	1/1:13,0:13:26.94:220,27,0	1/1:21,0:21:53.22:348,53,0	1/1:19,0:19:35.83:282,36,0	1/1:14,1:15:8.30:391,8,0	1/1:9,1:10:17.98:252,18,0	1/1:12,0:12:18.44:149,18,0	1/1:10,0:10:14.97:125,15,0	1/1:21,0:21:29.68:246,30,0	0/0:19,0:19:42.13:0,42,630	1/1:3,0:3:6:64,6,0	1/1:9,0:9:3.62:119,4,0	0/1:1,0:3:9.51:33,0,10	1/1:7,0:7:20.95:223,21,0	1/1:11,0:11:14.85:109,15,0	1/1:15,0:15:5.97:46,6,0	1/1:8,0:8:14.92:112,15,0	1/1:8,0:8:11.44:90,11,0	1/1:10,0:10:11.96:97,12,0	1/1:9,0:9:8.96:69,9,0	1/1:12,0:12:20.92:177,21,0	1/1:15,0:15:29.92:240,30,0	1/1:9,0:9:14.96:120,15,0
chr10	20694691	.	GGAGGCA	G	12006.39	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=8.365;DP=551;FS=0.398;HRun=0;HaplotypeScore=142.6750;InbreedingCoeff=0.9817;MQ=59.72;MQ0=2;MQRankSum=-12.128;QD=37.76;ReadPosRankSum=4.031;VQSLOD=4.3345;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:24,17:41:30.10:630,30,0	0/0:3,0:9:15.05:0,15,360	0/0:28,0:20:36.10:0,36,967	0/0:24,0:21:42.07:0,42,1151	0/0:15,0:32:57.11:0,57,1310	1/1:4,14:18:39.13:828,39,0	1/1:7,9:16:24.08:509,24,0	1/1:14,6:20:18.06:356,18,0	1/1:1,16:17:42.14:891,42,0	0/0:15,0:24:60.19:0,60,1522	0/0:8,0:13:15.05:0,15,341	1/1:4,19:23:54.19:1131,54,0	1/1:1,17:18:42.14:891,42,0	1/1:4,13:17:36.12:764,36,0	0/0:26,0:26:69.23:0,69,2220	0/0:18,0:18:39.13:0,39,1297	0/0:27,0:27:51.15:0,51,1565	0/0:6,0:6:12.04:0,12,399	0/0:24,0:23:42.14:0,42,1329	1/1:6,25:31:72.25:1528,72,0	1/1:6,7:13:15.52:311,16,0	1/1:5,10:15:27.09:564,27,0	1/1:6,9:15:24.08:509,24,0	1/1:2,7:9:19.62:386,20,0	1/1:9,13:22:33.11:700,33,0	1/1:6,8:14:30.10:614,30,0	1/1:4,19:23:54.19:1138,54,0	1/1:1,5:6:12.04:255,12,0
chr10	20694941	.	A	AT	17706.47	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-5.245;DP=715;FS=9.079;HRun=3;HaplotypeScore=71.7830;InbreedingCoeff=0.9916;MQ=82.13;MQ0=1;MQRankSum=-1.914;QD=38.41;ReadPosRankSum=0.894;VQSLOD=4.8443;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,25:26:63.21:881,63,0	0/0:4,0:4:9.03:0,9,108	0/0:20,0:20:54.14:0,54,627	0/0:19,0:19:53.46:0,53,583	0/0:25,0:25:72.22:0,72,864	1/1:1,24:25:69.23:966,69,0	1/1:1,25:26:63.21:882,63,0	1/1:5,40:45:99:1620,117,0	1/1:0,32:32:90.30:1260,90,0	0/0:26,0:26:75.22:0,75,888	0/0:26,0:26:78.24:0,78,936	1/1:0,29:29:84.28:1175,84,0	1/1:0,26:26:75.25:1050,75,0	1/1:0,22:22:66.22:924,66,0	0/0:29,0:29:87.25:0,87,1033	0/0:33,1:34:60.28:0,60,1135	0/0:29,0:29:84.26:0,84,1008	0/0:23,0:22:60.18:0,60,719	0/0:19,0:19:48.15:0,48,576	1/1:2,34:36:99:1465,105,0	1/1:0,20:20:51.17:714,51,0	1/1:0,23:23:66.22:924,66,0	1/1:3,27:30:78.26:1089,78,0	1/1:0,13:13:39.13:546,39,0	1/1:0,20:20:57.19:798,57,0	1/1:2,34:36:69.32:1374,69,0	1/1:1,33:33:93.31:1302,93,0	1/1:0,18:18:54.15:735,54,0
chr10	20696205	.	A	ACTT	22150.71	PASS	AB=0.526;AC=33;AF=0.589;AN=56;BaseQRankSum=-14.310;DP=617;FS=5.419;HRun=0;HaplotypeScore=73.6588;InbreedingCoeff=0.9318;MQ=79.10;MQ0=0;MQRankSum=-8.202;QD=57.99;ReadPosRankSum=1.098;VQSLOD=6.9104;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,18:21:39.13:880,39,0	0/0:8,0:8:24.07:0,24,375	0/0:24,0:24:58.59:0,59,824	0/0:10,0:10:27.09:0,27,421	0/0:27,0:27:78.25:0,78,1274	1/1:4,27:31:72.25:1602,72,0	1/1:0,9:11:24.08:542,24,0	1/1:4,23:27:75.23:1588,75,0	1/1:5,19:24:60.16:1276,60,0	0/0:30,0:30:81.28:0,81,1341	0/0:27,0:27:75.23:0,75,1199	1/1:0,13:13:36.12:813,36,0	1/1:0,19:19:57.20:1288,57,0	1/1:3,21:25:66.23:1488,66,0	0/0:24,0:23:69.23:0,69,1125	0/0:23,0:23:60.20:0,60,999	0/0:18,0:18:54.17:0,54,873	0/0:25,0:25:75.26:0,75,1243	0/0:19,0:19:54.18:0,54,892	1/1:1,37:39:99:2503,111,0	1/1:2,9:12:27.09:610,27,0	1/1:1,16:17:51.18:1153,51,0	1/1:4,26:30:75.26:1692,75,0	1/1:0,7:7:21.07:476,21,0	1/1:2,22:25:63.22:1393,63,0	0/1:3,27:30:9.66:1793,0,10	1/1:4,33:39:99:2307,105,0	1/1:0,12:12:33.11:748,33,0
chr10	20696349	.	ATTTG	A	17134.40	PASS	AB=0.524;AC=32;AF=0.571;AN=56;BaseQRankSum=17.893;DP=608;FS=0.682;HRun=0;HaplotypeScore=130.4750;InbreedingCoeff=0.8710;MQ=65.71;MQ0=0;MQRankSum=-14.625;QD=45.33;ReadPosRankSum=0.991;VQSLOD=5.4062;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,25:26:57.11:1006,57,0	0/0:14,0:14:42.14:0,42,1133	0/0:15,0:15:39.13:0,39,1037	0/0:10,0:10:27.09:0,27,622	0/0:31,0:31:78.24:0,78,1962	1/1:2,25:27:63.22:1173,63,0	1/1:1,17:18:45.15:853,45,0	1/1:4,25:29:74.91:1373,75,0	0/1:2,25:27:11.76:1161,0,12	0/0:31,0:31:90.30:0,90,2309	0/0:26,0:26:78.25:0,78,1985	1/1:3,24:27:66.23:1251,66,0	1/1:2,20:22:48.16:909,48,0	1/1:1,15:16:36.12:682,36,0	0/0:24,0:24:66.23:0,66,1746	0/0:26,0:26:78.26:0,78,2015	0/0:18,0:18:54.17:0,54,1353	0/0:14,0:14:39.13:0,39,1049	0/0:21,0:21:60.20:0,60,1549	1/1:1,26:27:75.22:1385,75,0	1/1:1,9:10:15.05:284,15,0	1/1:3,24:27:57.20:1080,57,0	1/1:1,21:22:60.10:1136,60,0	1/1:1,13:14:36.12:659,36,0	1/1:0,23:23:63.22:1194,63,0	0/1:3,24:27:5.76:1281,0,6	1/1:2,24:26:66.23:1251,66,0	1/1:0,9:9:24.08:455,24,0
chr10	20697420	.	T	TTGGGTGGG	889.65	PASS	AC=14;AF=0.538;AN=26;BaseQRankSum=-2.735;DP=112;FS=4.964;HRun=0;HaplotypeScore=37.0165;InbreedingCoeff=0.4621;MQ=122.36;MQ0=0;MQRankSum=-3.115;QD=29.65;ReadPosRankSum=0.684;VQSLOD=1.9666;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,2:8:6.02:218,6,0	./.	0/0:11,0:10:9.01:0,9,136	0/0:23,0:20:8.84:0,9,131	0/0:3,0:3:6.02:0,6,128	./.	./.	./.	1/1:2,1:3:3.01:122,3,0	./.	0/0:4,0:4:3.01:0,3,69	./.	1/1:2,1:3:3.01:125,3,0	1/1:2,0:2:3.01:39,3,0	0/0:1,0:1:3.01:0,3,77	0/0:3,0:3:3.01:0,3,77	./.	./.	./.	1/1:3,1:4:6.02:244,6,0	./.	./.	./.	./.	1/1:4,1:5:3.01:125,3,0	1/1:3,2:5:3.01:125,3,0	./.	./.
chr10	20698474	.	TTG	T	19612.03	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=17.353;DP=699;FS=7.567;HRun=0;HaplotypeScore=93.3271;InbreedingCoeff=0.9999;MQ=79.76;MQ0=0;MQRankSum=-2.121;QD=45.72;ReadPosRankSum=2.997;VQSLOD=5.9401;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,17:17:45.15:734,45,0	0/0:11,0:11:33.11:0,33,671	0/0:20,0:20:60.20:0,60,1144	0/0:16,0:16:45.15:0,45,870	0/0:33,0:33:99:0,99,1943	1/1:0,23:23:66.23:1077,66,0	1/1:0,16:16:45.15:734,45,0	1/1:0,31:31:93.29:1465,93,0	1/1:0,18:18:48.16:783,48,0	0/0:38,0:38:99:0,114,2284	0/0:19,0:19:57.20:0,57,1158	1/1:0,20:20:57.19:930,57,0	1/1:0,16:16:45.15:734,45,0	1/1:0,36:36:96.33:1566,96,0	0/0:30,0:30:90.31:0,90,1828	0/0:39,0:39:99:0,117,2290	0/0:26,0:26:75.26:0,75,1524	0/0:23,0:23:63.22:0,63,1278	0/0:15,0:15:45.15:0,45,863	1/1:0,47:47:99:2240,138,0	1/1:0,19:19:54.18:881,54,0	1/1:0,30:30:87.30:1419,87,0	1/1:0,22:22:60.14:979,60,0	1/1:0,26:26:72.25:1175,72,0	1/1:0,24:24:66.23:1077,66,0	1/1:0,30:30:90.31:1469,90,0	1/1:0,39:39:99:1664,102,0	1/1:0,15:15:42.14:685,42,0
chr10	20699028	.	A	ACG	16513.41	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-14.885;DP=594;FS=8.729;HRun=0;HaplotypeScore=65.1168;InbreedingCoeff=0.9992;MQ=90.12;MQ0=0;MQRankSum=-4.168;QD=46.65;ReadPosRankSum=2.103;VQSLOD=5.8871;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,39:40:99:2132,114,0	0/0:9,0:9:24.08:0,24,353	0/0:24,0:24:69.20:0,69,965	0/0:22,0:22:57.19:0,57,840	0/0:18,0:18:45.12:0,45,622	1/1:0,20:21:60.21:1120,60,0	1/1:3,18:22:42.14:784,42,0	1/1:3,21:24:63.22:1143,63,0	1/1:1,14:14:36.12:672,36,0	0/0:19,0:19:51.17:0,51,735	0/0:18,0:18:54.18:0,54,794	1/1:0,27:27:78.27:1458,78,0	1/1:0,21:21:51.17:954,51,0	1/1:0,11:11:27.09:505,27,0	0/0:24,0:24:72.24:0,72,1060	0/0:22,0:22:66.22:0,66,972	0/0:35,0:35:99:0,105,1546	0/0:26,0:26:72.24:0,72,1057	0/0:23,0:23:66.22:0,66,955	1/1:0,26:26:66.22:1191,66,0	1/1:1,26:27:66.23:1235,66,0	1/1:2,17:19:39.13:730,39,0	1/1:1,15:16:36.12:673,36,0	1/1:0,21:21:54.19:1011,54,0	1/1:1,21:22:51.17:955,51,0	1/1:0,15:15:45.11:775,45,0	1/1:3,16:17:39.13:728,39,0	1/1:0,8:8:24.08:448,24,0
chr10	20700166	.	T	TG	4733.55	PASS	AC=32;AF=0.593;AN=54;BaseQRankSum=-5.378;DP=262;FS=11.279;HRun=2;HaplotypeScore=32.8446;InbreedingCoeff=0.9098;MQ=72.83;MQ0=0;MQRankSum=-0.927;QD=32.65;ReadPosRankSum=1.799;VQSLOD=3.0538;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,5:7:12.04:161,12,0	0/0:3,0:3:6.02:0,6,74	0/0:6,0:6:18.03:0,18,200	0/0:2,0:2:5.99:0,6,59	0/0:14,0:14:33.10:0,33,409	1/1:0,8:8:12.04:173,12,0	1/1:1,13:14:36.12:519,36,0	1/1:2,3:5:9.03:130,9,0	1/1:2,10:12:27.05:366,27,0	0/0:10,0:10:27.05:0,27,309	0/0:8,0:8:15.05:0,15,186	1/1:0,9:9:21.07:302,21,0	1/1:1,5:6:15.05:216,15,0	1/1:1,8:9:24.08:340,24,0	0/0:11,0:11:33.10:0,33,409	0/0:7,0:7:21.07:0,21,260	0/0:24,0:24:69.22:0,69,854	0/0:24,0:24:72.21:0,72,878	0/0:7,0:7:18.06:0,18,223	1/1:0,2:2:6.02:86,6,0	1/1:4,20:24:48.14:669,48,0	1/1:0,5:5:9.03:129,9,0	1/1:0,3:3:9.03:130,9,0	1/1:1,12:13:36.12:519,36,0	./.	1/1:2,9:11:24.02:303,24,0	1/1:0,8:8:24.08:346,24,0	1/1:0,9:9:24.08:346,24,0
chr10	20700168	.	G	GT	1958.65	PASS	AB=1.000;AC=29;AF=0.537;AN=54;BaseQRankSum=9.293;DP=292;FS=14.821;HRun=1;HaplotypeScore=53.5256;InbreedingCoeff=0.7272;MQ=72.77;MQ0=0;MQRankSum=-0.216;QD=11.66;ReadPosRankSum=2.269;VQSLOD=0.4068;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,0:10:10.90:65,11,0	0/0:4,0:4:9.01:0,9,102	0/0:7,0:7:17.53:0,18,185	0/0:2,0:2:6:0,6,61	0/0:14,0:14:33.11:0,33,428	1/1:10,0:10:11.80:86,12,0	1/1:15,0:15:19.65:227,20,0	0/1:9,0:9:8.19:39,0,8	0/1:11,0:11:8.08:121,0,8	0/0:10,0:10:24.08:0,24,311	0/0:8,0:8:14.91:0,15,171	1/1:9,0:9:20.69:135,21,0	1/1:6,0:7:14.85:112,15,0	0/1:10,0:10:10.18:134,0,10	0/0:12,0:12:33.10:0,33,415	0/0:7,0:7:21.07:0,21,273	0/0:24,0:24:72.20:0,72,916	0/0:25,0:25:72.23:0,72,934	0/0:7,0:7:21.05:0,21,256	1/1:5,0:5:5.94:41,6,0	1/1:27,2:29:31.11:315,31,0	1/1:7,0:7:8.89:65,9,0	1/1:3,0:3:8.75:51,9,0	1/1:12,0:12:35.44:230,35,0	./.	1/1:10,2:12:32.08:227,32,0	1/1:10,0:10:23.62:159,24,0	1/1:9,0:9:23.70:159,24,0
chr10	20700224	.	T	TGCCCCC	2732.95	PASS	AC=30;AF=0.577;AN=52;BaseQRankSum=3.031;DP=212;FS=2.854;HRun=0;HaplotypeScore=62.3170;InbreedingCoeff=0.8918;MQ=78.28;MQ0=0;MQRankSum=-2.612;QD=24.62;ReadPosRankSum=-3.410;VQSLOD=2.1923;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:8,1:9:17.72:133,18,0	0/0:3,0:3:9:0,9,118	0/0:9,0:9:12.03:0,12,181	0/0:10,0:9:20.93:0,21,268	0/0:11,0:11:26.98:0,27,346	1/1:3,0:3:5.92:39,6,0	1/1:13,1:14:33.15:479,33,0	1/1:13,0:13:27.36:272,27,0	1/1:6,2:8:17.93:298,18,0	0/0:6,0:6:18.05:0,18,291	0/0:8,0:8:15.01:0,15,253	1/1:7,2:9:24.03:443,24,0	1/1:8,0:8:17.49:109,17,0	1/1:5,2:7:17.90:289,18,0	0/0:9,0:9:27.05:0,27,470	0/0:6,0:6:18.06:0,18,410	0/0:18,0:18:43.92:0,44,873	0/0:10,0:10:27.08:0,27,572	0/0:11,0:11:24.04:0,24,405	1/1:7,0:7:8.94:115,9,0	1/1:10,0:10:20.83:187,21,0	1/1:5,0:5:5.95:42,6,0	1/1:4,0:4:9:78,9,0	./.	1/1:1,2:3:3.01:99,3,0	1/1:5,0:5:11.91:92,12,0	1/1:5,1:6:14.96:267,15,0	./.
chr10	20700410	.	TACTG	T	13512.05	PASS	AB=0.514;AC=33;AF=0.589;AN=56;BaseQRankSum=10.967;DP=496;FS=0.765;HRun=0;HaplotypeScore=90.2448;InbreedingCoeff=0.9208;MQ=61.88;MQ0=1;MQRankSum=-6.015;QD=48.96;ReadPosRankSum=1.745;VQSLOD=5.4569;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,19:20:51.17:968,51,0	0/0:8,0:8:21.07:0,21,567	0/0:18,0:13:33.11:0,33,878	0/0:18,0:17:48.16:0,48,1217	0/0:18,0:18:51.15:0,51,1318	1/1:0,9:9:27.09:512,27,0	1/1:3,19:22:54.19:1025,54,0	1/1:5,25:29:72.21:1272,72,0	1/1:0,13:13:36.12:683,36,0	0/0:20,0:20:60.21:0,60,1586	0/0:19,0:19:54.17:0,54,1383	1/1:0,15:15:45.15:854,45,0	1/1:2,15:17:45.15:854,45,0	1/1:0,18:19:54.19:1024,54,0	0/0:26,0:26:75.24:0,75,1958	0/0:23,0:23:66.23:0,66,1761	0/0:22,0:22:63.22:0,63,1684	0/0:33,0:33:90.31:0,90,2428	0/0:15,0:15:45.15:0,45,1089	1/1:1,19:20:54.15:989,54,0	1/1:1,8:9:24.08:455,24,0	1/1:1,13:14:39.13:740,39,0	1/1:1,14:15:36.12:683,36,0	1/1:2,15:17:36.12:683,36,0	1/1:1,10:10:27.09:512,27,0	0/1:1,17:18:26.87:875,0,27	1/1:0,22:22:63.15:1153,63,0	1/1:1,4:5:12.04:228,12,0
chr10	20701137	.	ATCT	A	16479.21	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=16.689;DP=677;FS=9.428;HRun=0;HaplotypeScore=98.2522;InbreedingCoeff=0.9826;MQ=76.84;MQ0=0;MQRankSum=-6.341;QD=40.29;ReadPosRankSum=3.696;VQSLOD=5.9365;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,27:27:63.22:1029,63,0	0/0:10,0:10:30.10:0,30,670	0/0:22,0:22:53.93:0,54,1145	0/0:17,0:17:40.69:0,41,811	0/0:34,0:34:99:0,102,2213	1/1:2,18:20:45.15:710,45,0	1/1:0,20:20:48.16:784,48,0	1/1:0,30:30:90.29:1422,90,0	1/1:1,27:28:5.22:1060,5,0	0/0:43,0:43:99:0,123,2731	0/0:21,0:21:63.22:0,63,1376	1/1:0,26:26:69.24:1127,69,0	1/1:1,26:27:72.25:1170,72,0	1/1:0,19:19:51.17:820,51,0	0/0:25,0:25:63.22:0,63,1373	0/0:28,0:28:84.27:0,84,1787	0/0:25,0:25:72.25:0,72,1599	0/0:22,0:22:60.19:0,60,1224	0/0:21,0:21:54.16:0,54,1145	1/1:1,29:30:78.26:1240,78,0	1/1:0,21:21:45.07:661,45,0	1/1:2,27:29:72.20:1143,72,0	1/1:0,18:18:48.16:784,48,0	1/1:0,19:19:45.15:735,45,0	1/1:0,29:29:75.26:1209,75,0	1/1:1,25:26:75.21:1165,75,0	1/1:5,24:29:57.19:931,57,0	1/1:0,11:11:30.10:490,30,0
chr10	20702401	.	C	CCGCCCGCCCGCG	3507.32	PASS	AC=32;AF=0.593;AN=54;BaseQRankSum=-3.200;DP=280;FS=10.900;HRun=0;HaplotypeScore=98.0400;InbreedingCoeff=0.7371;MQ=96.71;MQ0=0;MQRankSum=-2.431;QD=50.83;ReadPosRankSum=-0.409;VQSLOD=2.6462;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,7:10:9.03:557,9,0	0/0:10,0:10:27:0,27,728	0/0:24,0:24:35.94:0,36,656	0/0:16,0:17:6.79:0,7,506	0/0:12,0:12:35.78:0,36,735	1/1:0,1:2:3.01:188,3,0	1/1:0,3:6:9.03:564,9,0	1/1:7,0:7:19.72:149,20,0	1/1:0,4:8:6.02:376,6,0	0/0:9,0:9:27.03:0,27,705	0/0:19,0:19:50.95:0,51,1142	1/1:3,0:3:8.98:168,9,0	1/1:0,2:3:3.01:189,3,0	1/1:0,1:4:3.01:188,3,0	0/0:14,0:14:42.09:0,42,1378	0/0:16,0:16:44.98:0,45,1121	0/0:27,0:27:80.90:0,81,2021	0/0:41,0:41:99:0,123,3495	0/0:22,0:22:62.85:0,63,1406	1/1:1,0:1:3.01:45,3,0	1/1:8,0:8:14.91:134,15,0	1/1:5,0:5:14.96:144,15,0	1/1:0,2:3:6.02:372,6,0	1/1:1,0:1:2.97:20,3,0	1/1:0,2:3:3.01:187,3,0	1/1:2,0:2:5.97:46,6,0	1/1:0,1:3:2.76:180,3,0	./.
chr10	20702831	.	GT	G	7668.18	PASS	AB=0.727;AC=34;AF=0.607;AN=56;BaseQRankSum=10.210;DP=591;FS=8.238;HRun=10;HaplotypeScore=61.8442;InbreedingCoeff=0.8429;MQ=75.03;MQ0=0;MQRankSum=-0.006;QD=19.27;ReadPosRankSum=1.447;VQSLOD=5.6967;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,25:28:65.98:573,66,0	0/0:9,0:9:21.06:0,21,232	0/1:18,2:20:10.69:11,0,199	0/0:12,0:11:13.76:0,14,131	0/0:24,1:25:40.11:0,40,661	1/1:5,12:17:19.50:293,20,0	1/1:0,19:20:56.03:475,56,0	1/1:6,22:28:62.94:539,63,0	1/1:0,30:30:86.98:755,87,0	0/0:22,0:24:69.01:0,69,736	0/0:20,0:20:51.12:0,51,552	0/1:3,17:20:12.37:363,0,12	1/1:3,22:25:62.98:547,63,0	1/1:2,18:20:50.98:443,51,0	0/0:23,0:24:69.01:0,69,736	0/0:28,1:29:58.12:0,58,836	0/0:25,0:26:72:0,72,766	0/0:12,0:12:36.09:0,36,391	0/0:11,0:12:14.49:0,14,294	1/1:3,15:18:32.93:286,33,0	1/1:4,18:22:7.93:371,8,0	1/1:4,18:22:50.97:443,51,0	1/1:3,14:17:35.82:312,36,0	1/1:5,12:17:29.98:260,30,0	1/1:1,16:17:38.98:339,39,0	1/1:3,31:34:59.08:721,59,0	1/1:3,27:30:74.98:651,75,0	1/1:1,11:12:32.99:287,33,0
chr10	20703073	.	TC	T	13841.86	PASS	AB=0.545;AC=33;AF=0.589;AN=56;BaseQRankSum=10.423;DP=663;FS=0.314;HRun=2;HaplotypeScore=62.4896;InbreedingCoeff=0.9235;MQ=56.13;MQ0=38;MQRankSum=3.543;QD=33.27;ReadPosRankSum=1.074;VQSLOD=4.8404;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,35:35:90.29:1168,90,0	0/0:8,0:8:24.08:0,24,359	0/0:20,0:7:15.05:0,15,202	0/0:24,0:11:27.08:0,27,355	0/0:32,0:32:93.27:0,93,1368	1/1:0,25:25:72.23:931,72,0	1/1:3,24:25:66.21:855,66,0	1/1:5,30:24:66.21:857,66,0	1/1:0,28:28:69.22:894,69,0	0/0:21,0:21:63.21:0,63,944	0/0:26,0:24:69.19:0,69,999	1/1:0,24:24:69.22:896,69,0	1/1:0,17:17:45.15:584,45,0	1/1:0,19:19:51.17:662,51,0	0/0:28,0:28:84.27:0,84,1238	0/0:17,0:17:48.16:0,48,719	0/0:37,0:37:99:0,102,1509	0/0:20,0:19:57.16:0,57,812	0/0:14,0:13:39.12:0,39,560	1/1:0,32:32:90.29:1168,90,0	1/1:1,35:36:93.30:1207,93,0	1/1:1,17:18:39.13:506,39,0	1/1:0,18:18:51.17:662,51,0	1/1:0,19:19:45.15:584,45,0	1/1:1,16:17:42.14:545,42,0	0/1:3,15:18:38.79:532,0,39	1/1:0,30:30:87.28:1128,87,0	1/1:0,18:18:51.17:662,51,0
chr10	20704429	.	C	CTG	24420.11	PASS	AB=0.532;AC=33;AF=0.589;AN=56;BaseQRankSum=-9.202;DP=718;FS=0.924;HRun=0;HaplotypeScore=90.6243;InbreedingCoeff=0.9288;MQ=76.33;MQ0=0;MQRankSum=-4.122;QD=51.74;ReadPosRankSum=0.101;VQSLOD=5.0838;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,49:52:99:2584,138,0	0/0:14,0:14:42.14:0,42,619	0/0:16,0:16:44.87:0,45,561	0/0:20,0:20:54.16:0,54,733	0/0:28,0:28:75.24:0,75,1081	1/1:2,12:14:42.14:778,42,0	1/1:2,22:25:69.24:1271,69,0	1/1:4,25:29:84.27:1507,84,0	1/1:7,26:33:96.31:1750,96,0	0/0:37,0:37:99:0,111,1634	0/0:11,0:11:27.09:0,27,398	1/1:2,32:35:93.32:1737,93,0	1/1:4,36:40:99:2133,114,0	1/1:6,17:23:66.23:1223,66,0	0/0:34,0:34:99:0,99,1458	0/0:35,0:35:99:0,105,1546	0/0:26,0:26:75.24:0,75,1085	0/0:7,0:7:21.07:0,21,307	0/0:18,0:18:48.16:0,48,706	1/1:4,16:20:60.19:1078,60,0	1/1:3,32:35:90.29:1652,90,0	1/1:5,18:23:69.22:1217,69,0	1/1:2,23:25:72.25:1330,72,0	1/1:5,21:26:75.21:1355,75,0	1/1:2,15:17:48.16:885,48,0	0/1:3,22:25:13.13:1210,0,13	1/1:7,33:39:99:2148,117,0	1/1:0,10:10:30.10:562,30,0
chr10	20704501	.	GT	G	15450.31	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=13.879;DP=658;FS=0.610;HRun=1;HaplotypeScore=81.6782;InbreedingCoeff=0.9845;MQ=86.85;MQ0=0;MQRankSum=-5.266;QD=37.59;ReadPosRankSum=2.295;VQSLOD=5.3851;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,31:32:93.29:1280,93,0	0/0:14,0:14:42.14:0,42,671	0/0:26,0:26:66.77:0,67,997	0/0:22,0:22:60.07:0,60,847	0/0:25,0:25:75.24:0,75,1136	1/1:0,14:14:42.03:540,42,0	1/1:3,22:25:75.25:1048,75,0	1/1:0,31:31:87.24:1149,87,0	1/1:1,28:29:87.17:1154,87,0	0/0:26,0:26:78.27:0,78,1236	0/0:13,0:13:36.12:0,36,562	1/1:2,20:22:66.13:876,66,0	1/1:0,39:39:99:1482,108,0	1/1:0,24:24:63.21:880,63,0	0/0:36,0:36:99:0,108,1700	0/0:26,0:26:78.27:0,78,1245	0/0:21,0:21:63.21:0,63,1007	0/0:17,0:17:51.15:0,51,787	0/0:21,0:21:63.14:0,63,932	1/1:2,32:34:93.25:1247,93,0	1/1:3,16:19:51.14:677,51,0	1/1:0,24:24:69.23:962,69,0	1/1:1,25:26:63.21:880,63,0	1/1:0,23:23:60.15:815,60,0	1/1:0,16:16:43.96:592,44,0	1/1:4,20:25:21.23:836,21,0	1/1:2,22:24:72.15:948,72,0	1/1:0,4:4:6.02:84,6,0
chr10	20705779	.	TTCTCTCTCTC	T	5227.17	PASS	AB=0.932;AC=41;AF=0.788;AN=52;BaseQRankSum=1.648;DP=627;FS=67.163;HRun=0;HaplotypeScore=176.4992;InbreedingCoeff=0.2902;MQ=60.83;MQ0=23;MQRankSum=2.962;QD=11.36;ReadPosRankSum=3.752;VQSLOD=1.3228;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:23,2:24:76.58:250,0,77	1/1:6,1:6:3.01:85,3,0	./.	0/0:39,0:21:0.47:0,0,1	0/1:19,0:19:36.87:103,0,37	1/1:12,0:11:3.01:88,3,0	1/1:14,0:13:2.47:24,2,0	0/0:32,0:32:6.30:0,6,19	1/1:18,2:21:15.03:335,15,0	0/0:27,0:27:14.39:0,14,328	0/0:13,0:13:3:0,3,25	1/1:14,0:17:9.03:234,9,0	1/1:16,2:19:12.87:340,13,0	1/1:25,2:29:24.04:536,24,0	./.	1/1:25,0:26:32.55:474,33,0	1/1:31,0:28:27.05:515,27,0	1/1:14,0:13:11.67:87,12,0	1/1:23,0:22:2.22:85,2,0	1/1:21,2:23:3.01:68,3,0	1/1:32,0:29:8.99:170,9,0	1/1:12,1:14:12.04:311,12,0	1/1:22,1:22:12.04:337,12,0	1/1:21,0:16:12.04:264,12,0	1/1:13,0:12:3.01:51,3,0	0/1:23,1:27:72.40:318,0,72	1/1:18,2:20:9.03:258,9,0	1/1:21,3:20:15.05:293,15,0
chr10	20705833	.	CTGTGTGTGTGTG	C	2599.33	PASS	AB=0.830;AC=24;AF=0.480;AN=50;BaseQRankSum=0.364;DP=536;FS=8.462;HRun=0;HaplotypeScore=196.4045;InbreedingCoeff=0.4799;MQ=35.32;MQ0=56;MQRankSum=-3.115;QD=7.92;ReadPosRankSum=0.900;VQSLOD=2.0381;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:24,9:29:3.01:103,3,0	0/0:7,0:7:12.04:0,12,484	./.	./.	0/0:13,0:12:11.97:0,12,450	1/1:15,1:15:5.13:193,5,0	0/0:11,6:14:0.82:0,1,3	0/0:18,0:15:0.47:0,0,1	1/1:13,13:27:11.53:371,12,0	0/1:8,0:10:79.29:79,0,140	0/0:2,0:6:0:0,0,1	1/1:20,9:26:15.05:463,15,0	1/1:12,3:15:8.86:297,9,0	./.	0/0:19,0:16:23.82:0,24,631	0/0:26,0:33:11.37:0,11,167	0/1:32,0:25:15.26:15,0,31	0/0:15,0:17:10.33:0,10,197	0/0:13,0:12:19.40:0,19,260	0/0:11,0:12:0:0,0,0	1/1:29,1:27:3.01:99,3,0	1/1:11,5:18:3.41:19,3,0	0/1:8,2:10:0:0,0,0	0/1:27,7:24:0:0,0,0	0/0:13,4:17:2.04:0,2,6	1/1:12,4:16:14.91:494,15,0	1/1:10,6:20:18.06:560,18,0	1/1:19,3:15:2.42:55,2,0
chr10	20708750	.	CA	C	9026.17	PASS	AB=0.931;AC=36;AF=0.643;AN=56;BaseQRankSum=15.540;DP=683;FS=2.740;HRun=10;HaplotypeScore=99.9687;InbreedingCoeff=0.8543;MQ=76.51;MQ0=0;MQRankSum=-2.834;QD=19.79;ReadPosRankSum=3.132;VQSLOD=5.2635;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,40:45:99:885,102,0	0/0:9,0:9:21.93:0,22,226	0/1:16,1:16:0.72:1,0,217	0/0:14,0:14:24.05:0,24,246	0/0:31,3:34:72.15:0,72,767	1/1:3,14:17:35.99:312,36,0	1/1:3,29:32:80.98:703,81,0	1/1:3,22:25:35.80:540,36,0	1/1:5,20:25:53.98:469,54,0	0/0:22,2:24:11.91:0,12,552	0/0:13,1:14:7.02:0,7,297	1/1:1,24:25:68.98:599,69,0	1/1:2,30:32:80.98:703,81,0	1/1:2,25:27:59.97:521,60,0	0/0:43,0:43:99:0,112,1198	0/0:29,2:32:34.84:0,35,780	0/0:35,0:35:93.22:0,93,1011	0/0:19,2:22:0.63:0,1,464	0/1:10,1:11:1.99:2,0,208	1/1:3,27:30:68.65:598,69,0	1/1:3,24:27:65.98:573,66,0	1/1:1,27:29:83.02:709,83,0	1/1:1,14:15:41.99:364,42,0	1/1:2,18:20:17.81:384,18,0	1/1:3,22:25:62.98:547,63,0	1/1:5,15:20:44.96:391,45,0	1/1:3,23:26:62.97:544,63,0	1/1:0,8:8:21:182,21,0
chr10	20710961	.	AC	A	2346.50	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=10.433;DP=509;FS=0.000;HRun=7;HaplotypeScore=59.1716;InbreedingCoeff=0.9167;MQ=75.46;MQ0=0;MQRankSum=-6.977;QD=24.19;ReadPosRankSum=-0.411;VQSLOD=3.6961;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:75.20:0,75,903	0/0:7,0:7:21.04:0,21,239	0/0:8,0:8:18.03:0,18,195	0/0:14,1:15:3.18:0,3,195	0/0:11,0:11:24.08:0,24,301	0/0:18,0:18:54.17:0,54,677	0/0:25,0:25:69.22:0,69,866	0/0:20,0:20:42.10:0,42,501	0/0:15,0:15:45.14:0,45,563	0/0:14,0:14:24.07:0,24,289	0/0:14,1:15:5.98:0,6,384	0/0:31,0:31:93.27:0,93,1144	0/0:26,0:26:75.23:0,75,926	0/0:19,0:19:57.18:0,57,716	0/0:17,0:17:45.14:0,45,566	1/1:2,23:25:63.14:641,63,0	1/1:8,21:29:63.14:641,63,0	1/1:2,16:18:51.11:520,51,0	1/1:2,23:25:69.15:703,69,0	0/0:8,0:8:18.06:0,18,226	0/0:14,0:14:39.10:0,39,464	0/0:15,0:15:39.10:0,39,467	0/0:11,0:11:33.10:0,33,409	0/0:18,0:18:48.15:0,48,604	0/0:17,1:18:17.53:0,18,509	0/0:27,0:27:66.21:0,66,827	0/0:25,0:25:75.16:0,75,922	0/0:6,0:6:18.06:0,18,226
chr10	20710994	.	TC	T	1812.71	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=10.292;DP=515;FS=12.752;HRun=7;HaplotypeScore=60.2217;InbreedingCoeff=0.9874;MQ=74.20;MQ0=0;MQRankSum=-8.568;QD=22.38;ReadPosRankSum=1.348;VQSLOD=2.8063;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:72.22:0,72,894	0/0:7,0:7:18.06:0,18,226	0/0:13,0:11:29.11:0,29,322	0/0:18,0:17:25.77:0,26,333	0/0:10,0:10:27.09:0,27,339	0/0:22,0:22:66.19:0,66,804	0/0:25,0:25:69.22:0,69,864	0/0:17,0:17:36.06:0,36,423	0/0:23,0:23:63.65:0,64,766	0/0:9,0:9:27.09:0,27,339	0/0:15,0:15:45.14:0,45,566	0/0:32,0:32:87.28:0,87,1093	0/0:27,0:27:75.19:0,75,890	0/0:22,0:22:60.18:0,60,740	0/0:20,0:20:57.18:0,57,715	1/1:3,16:19:48.09:483,48,0	1/1:3,29:32:75.17:765,75,0	1/1:3,13:16:36.08:367,36,0	1/1:4,10:14:36.06:359,36,0	0/0:9,0:9:24.06:0,24,289	0/0:16,0:16:45.14:0,45,566	0/0:16,0:16:42.12:0,42,515	0/0:17,0:17:42.12:0,42,514	0/0:16,0:16:45.13:0,45,554	0/0:18,0:18:54.14:0,54,650	0/0:28,0:28:78.19:0,78,950	0/0:22,0:22:63.17:0,63,765	0/0:4,0:4:12.03:0,12,138
chr10	20711740	.	TCC	T	17637.94	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=8.496;DP=638;FS=7.059;HRun=6;HaplotypeScore=85.1230;InbreedingCoeff=1.0000;MQ=82.91;MQ0=1;MQRankSum=-5.613;QD=35.70;ReadPosRankSum=3.667;VQSLOD=4.2924;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,35:36:96.28:1260,96,0	0/0:16,0:16:45.15:0,45,810	0/0:21,0:21:51.15:0,51,839	0/0:18,0:18:51.13:0,51,837	0/0:30,0:30:87.28:0,87,1522	1/1:1,19:20:57.19:760,57,0	1/1:1,26:27:63.21:841,63,0	1/1:2,35:37:99:1385,105,0	1/1:1,24:25:66.22:881,66,0	0/0:23,0:23:69.24:0,69,1234	0/0:12,0:12:36.11:0,36,612	1/1:0,18:18:51.17:681,51,0	1/1:2,23:25:66.21:881,66,0	1/1:1,24:25:66.17:860,66,0	0/0:24,0:24:66.23:0,66,1185	1/1:1,18:19:54.18:720,54,0	1/1:2,25:27:75.24:1001,75,0	1/1:1,17:18:48.16:640,48,0	1/1:0,15:15:45.13:585,45,0	1/1:1,22:23:66.18:861,66,0	1/1:0,17:16:45.15:600,45,0	1/1:2,26:28:75.20:980,75,0	1/1:2,20:22:60.19:798,60,0	1/1:0,18:18:48.16:640,48,0	1/1:1,30:31:72.23:960,72,0	1/1:1,25:26:72.22:944,72,0	1/1:2,22:24:63.21:839,63,0	1/1:0,13:13:39.13:520,39,0
chr10	20712661	.	CA	C	6096.62	PASS	AB=0.697;AC=41;AF=0.732;AN=56;BaseQRankSum=4.250;DP=426;FS=12.982;HRun=11;HaplotypeScore=44.4044;InbreedingCoeff=0.6974;MQ=63.41;MQ0=1;MQRankSum=1.170;QD=17.62;ReadPosRankSum=3.205;VQSLOD=4.7971;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,37:40:69.91:781,70,0	0/1:5,1:6:9.64:10,0,102	0/0:9,0:5:8.99:0,9,84	0/0:11,0:7:8.99:0,9,79	0/0:15,0:14:33.08:0,33,352	1/1:2,8:10:23.97:197,24,0	1/1:0,13:13:35.96:296,36,0	1/1:2,10:10:3.68:174,4,0	1/1:6,14:20:32.94:271,33,0	0/0:14,0:14:27.06:0,27,281	0/0:12,0:12:33.08:0,33,352	0/1:6,6:12:36.93:124,0,37	1/1:3,8:11:23.97:197,24,0	1/1:5,12:17:32.94:271,33,0	0/0:18,0:18:39.10:0,39,416	0/1:4,13:17:2.46:275,0,2	1/1:2,26:29:61.97:498,62,0	1/1:1,17:19:49.98:400,50,0	1/1:7,5:9:17.97:148,18,0	1/1:0,13:13:38.96:320,39,0	1/1:3,30:33:80.91:665,81,0	1/1:1,5:6:11.98:99,12,0	1/1:1,4:5:8.99:74,9,0	1/1:3,26:29:68.92:567,69,0	1/1:1,7:8:14.98:123,15,0	1/1:1,13:14:38.91:313,39,0	1/1:2,8:10:20.97:172,21,0	1/1:2,8:10:14.97:123,15,0
chr10	20712834	.	T	TAATA	2055.72	PASS	AB=0.704;AC=27;AF=0.794;AN=34;BaseQRankSum=1.454;DP=215;FS=18.116;HRun=0;HaplotypeScore=34.2445;InbreedingCoeff=0.4363;MQ=48.83;MQ0=10;MQRankSum=-2.874;QD=13.35;ReadPosRankSum=-2.668;VQSLOD=0.8431;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,1:6:3.01:52,3,0	0/0:4,0:4:9.03:0,9,141	./.	./.	0/0:8,0:8:9.03:0,9,141	1/1:7,0:12:6.02:102,6,0	1/1:4,0:4:3.01:51,3,0	1/1:36,0:26:33.11:519,33,0	./.	./.	0/0:9,0:9:12.04:0,12,188	./.	1/1:3,0:4:3.01:52,3,0	1/1:7,0:7:3.01:52,3,0	./.	1/1:5,2:7:6.02:142,6,0	1/1:6,6:12:3.01:71,3,0	0/1:10,8:16:3.11:446,0,3	1/1:6,1:5:6.02:140,6,0	1/1:5,0:7:6.02:82,6,0	./.	./.	./.	./.	1/1:8,0:11:12.04:206,12,0	./.	1/1:4,0:6:6.02:104,6,0	1/1:2,1:9:9.03:157,9,0
chr10	20713579	.	T	TG	5123.70	PASS	AB=0.621;AC=40;AF=0.714;AN=56;BaseQRankSum=-6.568;DP=490;FS=113.205;HRun=8;HaplotypeScore=69.6274;InbreedingCoeff=0.7694;MQ=76.44;MQ0=0;MQRankSum=-2.565;QD=13.85;ReadPosRankSum=0.307;VQSLOD=-0.4538;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,12:20:14.40:202,14,0	0/0:5,0:5:12.01:0,12,110	0/0:18,0:18:24.61:0,25,181	0/0:13,0:14:20.97:0,21,248	0/0:24,0:24:60.02:0,60,549	1/1:3,11:14:24.02:261,24,0	1/1:5,14:19:15.93:175,16,0	1/1:8,5:13:15.04:173,15,0	1/1:3,20:23:29.92:346,30,0	0/0:23,0:23:60.03:0,60,549	0/0:21,0:21:51.02:0,51,466	1/1:7,14:21:14.85:173,15,0	0/1:7,11:18:9.45:140,0,9	1/1:8,16:24:8.60:338,9,0	0/0:15,0:15:42.01:0,42,380	1/1:5,10:16:23.82:227,24,0	1/1:11,14:25:17.88:161,18,0	1/1:4,9:13:17.93:176,18,0	1/1:3,12:15:36.11:416,36,0	1/1:11,11:22:2.54:252,3,0	1/1:7,15:22:30.09:346,30,0	1/1:2,9:11:24.07:277,24,0	1/1:4,11:15:15.04:173,15,0	1/1:7,13:20:21.06:242,21,0	1/1:4,11:15:27.04:297,27,0	0/1:9,14:23:14.92:333,0,15	1/1:1,15:16:24.07:277,24,0	1/1:1,4:5:12.04:138,12,0
chr10	20714018	.	TA	T	3564.53	PASS	AB=0.647;AC=35;AF=0.625;AN=56;BaseQRankSum=4.502;DP=586;FS=2.652;HRun=15;HaplotypeScore=67.3650;InbreedingCoeff=0.3548;MQ=68.16;MQ0=2;MQRankSum=0.768;QD=8.47;ReadPosRankSum=5.440;VQSLOD=3.0273;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,23:36:8.62:278,9,0	0/0:13,0:14:25.91:0,26,230	0/0:31,0:20:0.88:0,1,71	0/0:22,0:15:12.22:0,12,75	0/0:31,3:35:12.19:0,12,333	1/1:7,13:20:9.15:136,9,0	0/1:13,8:23:54.32:65,0,54	1/1:8,9:19:32.66:190,33,0	1/1:6,10:17:25.61:159,26,0	0/0:16,0:16:8.72:0,9,182	0/0:17,0:17:37.16:0,37,297	1/1:4,14:20:36.57:223,37,0	0/1:6,9:15:18.84:108,0,19	0/1:7,14:22:32.83:190,0,33	0/0:24,3:27:20.48:0,20,398	1/1:3,13:17:15.98:196,16,0	1/1:12,30:46:79.57:489,80,0	1/1:4,13:24:31.35:227,31,0	0/1:7,5:12:29.24:58,0,29	1/1:4,12:17:5.66:153,6,0	0/1:2,6:10:7.29:53,0,7	0/1:9,4:15:0.38:116,0,0	1/1:4,9:16:26.96:154,27,0	1/1:6,21:28:2.55:261,3,0	1/1:4,16:21:2.18:133,2,0	0/1:6,9:16:8.71:124,0,9	1/1:5,14:20:17.36:231,17,0	1/1:7,0:7:2.88:19,3,0
chr10	20714923	.	TAGAG	T	1438.28	PASS	AB=0.860;AC=33;AF=0.635;AN=52;BaseQRankSum=3.754;DP=464;FS=5.193;HRun=0;HaplotypeScore=75.3994;InbreedingCoeff=0.1625;MQ=52.93;MQ0=28;MQRankSum=0.171;QD=4.31;ReadPosRankSum=-0.643;VQSLOD=0.9707;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:22:5.97:47,6,0	0/0:11,0:10:17.96:0,18,154	./.	./.	1/1:16,7:22:3.01:46,3,0	0/1:14,1:13:13.66:85,0,14	1/1:11,0:7:6.01:70,6,0	0/0:31,0:26:8.37:0,8,42	1/1:5,6:11:12.04:181,12,0	0/1:16,6:20:3.16:160,0,3	0/1:18,1:16:30.79:40,0,31	1/1:6,2:8:6.02:90,6,0	0/1:17,0:17:25.76:26,0,95	1/1:8,7:15:8.97:112,9,0	0/0:18,0:16:24.04:0,24,387	1/1:11,0:11:3:26,3,0	0/0:12,0:20:2.97:0,3,41	0/1:15,0:22:40.09:47,0,40	0/0:14,0:14:2.03:0,2,20	1/1:21,10:31:15.38:170,15,0	0/0:11,0:10:2.97:0,3,20	1/1:10,0:10:2.50:9,2,0	1/1:6,1:7:3.01:46,3,0	1/1:12,0:10:2.54:20,3,0	1/1:7,1:8:7.58:96,8,0	0/1:26,0:25:20.10:149,0,20	0/1:14,12:25:0.48:127,0,0	1/1:7,6:12:3.01:46,3,0
chr10	20714969	.	GAGAGAA	G	191.31	PASS	AB=0.955;AC=7;AF=0.125;AN=56;BaseQRankSum=4.004;DP=541;FS=41.117;HRun=0;HaplotypeScore=111.8806;InbreedingCoeff=-0.1539;MQ=60.66;MQ0=26;MQRankSum=-2.335;QD=1.37;ReadPosRankSum=-1.513;VQSLOD=-0.2083;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:33:57.46:0,57,571	0/0:15,0:14:20.43:0,20,157	0/0:7,0:6:1.88:0,2,104	0/1:16,0:13:16.79:17,0,154	0/0:24,0:23:39.74:0,40,353	0/0:23,0:21:45.57:0,46,389	0/0:23,0:19:23.71:0,24,271	0/0:24,0:20:30:0,30,375	0/0:14,0:14:10.05:0,10,138	0/0:24,0:21:25.93:0,26,294	0/0:16,0:13:19.33:0,19,219	0/0:10,0:10:15.60:0,16,115	0/1:20,0:19:1.33:1,0,370	0/0:16,0:16:10.71:0,11,189	0/0:25,0:24:43.14:0,43,678	0/1:6,5:11:48.52:49,0,106	0/0:28,0:26:30.07:0,30,255	0/1:31,0:29:34.97:35,0,352	0/1:18,0:17:98.80:99,0,229	0/1:18,0:17:36.96:37,0,50	0/0:17,0:17:27.21:0,27,188	0/0:14,0:14:4.65:0,5,79	0/0:7,0:7:14.69:0,15,150	0/0:17,0:14:27.20:0,27,256	0/0:18,0:18:43.74:0,44,395	0/1:26,0:25:77.08:77,0,310	0/0:22,0:22:25.74:0,26,213	0/0:21,0:19:37.18:0,37,303
chr10	20714971	.	GAGAA	G	812.55	PASS	AB=0.939;AC=19;AF=0.339;AN=56;BaseQRankSum=7.896;DP=535;FS=52.877;HRun=0;HaplotypeScore=92.5961;InbreedingCoeff=-0.4963;MQ=60.89;MQ0=25;MQRankSum=-4.275;QD=2.48;ReadPosRankSum=-1.324;VQSLOD=-0.7268;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,6:33:36.44:0,36,474	0/0:15,0:14:20.90:0,21,168	0/0:7,0:6:1.83:0,2,104	0/1:16,0:13:22.21:22,0,152	0/0:25,0:24:5.89:0,6,304	0/1:23,0:21:25.14:25,0,272	0/1:23,0:19:11.59:12,0,245	0/0:24,0:20:25.19:0,25,369	0/1:13,1:14:98.96:111,0,99	0/1:21,1:19:99:126,0,237	0/1:11,5:14:17.74:18,0,158	0/1:11,0:11:32.27:32,0,109	0/1:20,0:19:73.40:73,0,225	0/1:15,0:15:37.99:38,0,156	0/0:24,0:23:42.35:0,42,531	0/1:11,0:11:16.87:17,0,106	0/0:29,0:27:33.02:0,33,263	0/0:31,0:29:27.20:0,27,381	0/1:18,0:17:36.45:36,0,230	0/1:19,0:18:53.08:123,0,53	0/0:17,0:17:26.27:0,26,186	0/1:5,7:12:13.88:14,0,74	0/1:7,0:7:4.12:4,0,93	0/1:14,3:14:6.83:7,0,203	0/1:17,0:17:29.19:29,0,297	0/1:15,10:24:99:229,0,218	0/1:20,0:20:48.22:48,0,133	0/1:21,0:19:1.05:1,0,261
chr10	20716074	.	TGTGTGTG	T	1368.72	PASS	AB=0.990;AC=20;AF=0.357;AN=56;BaseQRankSum=1.690;DP=705;FS=1.219;HRun=0;HaplotypeScore=86.1468;InbreedingCoeff=-0.0029;MQ=47.45;MQ0=146;MQRankSum=-1.811;QD=3.61;ReadPosRankSum=-1.789;VQSLOD=1.6148;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:20:5.21:5,0,33	0/1:14,0:6:39.68:40,0,58	0/0:51,0:16:13.26:0,13,478	0/0:51,0:15:32.75:0,33,578	0/1:19,0:7:64.28:64,0,99	0/1:21,0:18:15.38:15,0,47	0/1:23,0:21:9.05:9,0,67	0/1:31,0:19:2.88:405,0,3	0/1:21,0:16:12.54:36,0,13	0/1:20,1:15:7.41:296,0,7	1/1:27,0:21:8.82:56,9,0	0/0:23,0:16:11.87:0,12,81	0/0:15,0:9:2.98:0,3,21	1/1:14,1:10:8.88:110,9,0	0/0:29,0:26:9.03:0,9,224	0/0:31,0:30:82.98:0,83,2150	0/0:33,0:33:80.24:0,80,2165	0/0:17,0:17:43.29:0,43,1158	0/0:17,0:16:31.18:0,31,679	0/0:17,0:13:2.98:0,3,21	0/0:34,0:25:0.47:0,0,1	0/1:23,1:9:63.69:113,0,64	1/1:18,1:12:5.93:89,6,0	0/1:42,0:27:19.78:20,0,48	0/1:25,0:18:8.40:8,0,33	1/1:23,0:14:1.34:195,1,0	0/1:26,1:21:67.50:68,0,84	0/0:8,0:6:5.95:0,6,42
chr10	20716076	.	TGTGTG	T	2208.58	PASS	AB=1.000;AC=37;AF=0.661;AN=56;BaseQRankSum=5.591;DP=704;FS=9.112;HRun=0;HaplotypeScore=73.3720;InbreedingCoeff=0.5412;MQ=45.18;MQ0=149;MQRankSum=-0.713;QD=4.96;ReadPosRankSum=2.312;VQSLOD=0.5462;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:21:6.38:22,6,0	1/1:15,0:7:0.70:72,1,0	0/0:51,0:15:30.04:0,30,434	0/0:49,0:14:35.75:0,36,539	0/1:19,0:7:45.88:64,0,46	1/1:20,2:18:12.62:150,13,0	0/1:23,0:21:8.09:27,0,8	1/1:31,0:19:11.21:570,11,0	1/1:20,0:15:7.83:71,8,0	1/1:23,0:17:13.34:263,13,0	1/1:7,18:19:9.03:180,9,0	1/1:23,0:16:8.11:28,8,0	1/1:15,0:9:1.82:5,2,0	1/1:12,2:9:9.03:166,9,0	0/0:29,0:26:9.03:0,9,146	0/0:31,0:30:77.22:0,77,1715	0/0:31,0:31:80.24:0,80,1758	0/0:17,0:17:43.29:0,43,939	0/0:16,0:14:31.41:0,31,558	1/1:17,0:13:1.81:5,2,0	0/0:35,0:26:0.47:0,0,1	0/1:24,0:9:16.64:106,0,17	1/1:9,11:13:5.71:102,6,0	1/1:41,2:28:11.47:140,11,0	1/1:23,1:17:6.64:73,7,0	1/1:25,0:16:24.07:259,24,0	1/1:26,0:20:14.27:76,14,0	1/1:8,0:6:3.63:11,4,0
chr10	20716078	.	TGTG	T	3542.27	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=5.055;DP=700;FS=5.643;HRun=0;HaplotypeScore=59.9178;InbreedingCoeff=0.7483;MQ=45.26;MQ0=147;MQRankSum=-0.925;QD=8.00;ReadPosRankSum=1.967;VQSLOD=1.7801;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,20:21:9.03:150,9,0	1/1:13,1:6:6.96:123,7,0	0/0:51,0:15:31.23:0,31,436	0/0:50,0:17:6.85:0,7,505	1/1:19,0:7:5.26:85,5,0	1/1:7,15:18:15.05:216,15,0	1/1:4,18:20:10.81:125,11,0	1/1:32,0:20:19.11:635,19,0	1/1:7,13:15:9.03:116,9,0	1/1:24,0:18:26.56:292,27,0	1/1:25,0:19:9.02:96,9,0	1/1:7,15:15:11.95:199,12,0	1/1:7,8:9:3.01:50,3,0	1/1:8,6:9:9.01:87,9,0	0/0:28,0:25:8.95:0,9,67	0/0:32,0:31:77.49:0,77,1360	0/0:31,0:31:80.24:0,80,1395	0/0:17,0:17:43.59:0,44,735	0/0:16,0:14:31.34:0,31,457	1/1:5,12:13:3.01:50,3,0	0/0:11,21:23:0.47:0,0,1	1/1:22,1:8:8.41:159,8,0	1/1:20,0:13:5.71:65,6,0	1/1:20,23:28:15.04:209,15,0	1/1:10,14:17:9.03:129,9,0	1/1:12,14:17:28.10:330,28,0	1/1:5,20:20:20.80:327,21,0	1/1:1,6:6:6.02:100,6,0
chr10	20716080	.	TG	T	2467.39	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=7.032;DP=691;FS=9.909;HRun=2;HaplotypeScore=53.1416;InbreedingCoeff=0.7559;MQ=45.02;MQ0=147;MQRankSum=0.871;QD=5.32;ReadPosRankSum=2.061;VQSLOD=-0.0804;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:26,2:21:8.84:54,9,0	1/1:3,11:6:11.68:132,12,0	0/0:48,1:14:31.49:0,31,391	0/0:49,1:18:8.76:0,9,442	1/1:7,12:7:12.04:154,12,0	1/1:22,0:18:14.77:108,15,0	1/1:20,1:19:11.87:95,12,0	1/1:9,23:20:22.88:640,23,0	1/1:20,0:15:8.96:83,9,0	1/1:23,2:19:29.71:322,30,0	1/1:22,2:18:8.81:68,9,0	1/1:22,0:15:11.56:81,12,0	1/1:14,0:8:2.94:18,3,0	1/1:14,0:9:8.65:45,9,0	1/1:27,0:24:4.66:11,5,0	0/0:31,1:31:87.45:0,87,1106	0/0:31,0:31:80.24:0,80,1089	0/0:17,0:17:43.44:0,43,591	0/0:16,0:14:22.28:0,22,387	1/1:16,1:13:2.92:17,3,0	0/0:26,5:22:0.47:0,0,1	1/1:11,12:8:14.98:171,15,0	1/1:16,3:12:5.60:51,6,0	1/1:40,3:28:14.63:84,15,0	1/1:22,1:16:8.79:51,9,0	1/1:24,0:15:28.54:298,29,0	1/1:23,2:19:20.42:132,20,0	1/1:8,0:6:5.88:35,6,0
chr10	20716081	.	G	GTG	42.40	PASS	AB=0.771;AC=8;AF=0.143;AN=56;BaseQRankSum=0.948;DP=692;FS=2.911;HRun=0;HaplotypeScore=69.2209;InbreedingCoeff=0.2846;MQ=45.35;MQ0=147;MQRankSum=0.560;QD=0.27;ReadPosRankSum=-3.217;VQSLOD=1.0638;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:22:8.23:0,8,36	0/0:13,0:6:2.42:0,2,12	0/0:50,0:16:18.68:0,19,141	0/0:50,0:19:20.80:0,21,190	0/0:14,0:6:2.35:0,2,11	0/0:17,0:17:11.92:0,12,50	0/1:19,0:19:9.74:10,0,24	1/1:25,0:20:4.24:28,4,0	0/0:14,0:15:5.85:0,6,21	0/1:4,0:19:10.95:11,0,15	0/0:20,0:18:6.07:0,6,27	0/0:15,0:15:10.61:0,11,44	0/0:8,0:8:2.74:0,3,12	0/0:11,0:10:8.39:0,8,38	1/1:0,1:25:8.49:61,8,0	0/0:31,0:32:66.02:0,66,747	0/0:29,0:31:66.16:0,66,763	0/0:17,0:17:29.81:0,30,333	0/0:16,0:14:3.91:0,4,204	0/0:15,0:14:2.74:0,3,12	0/1:27,0:22:0:0,0,0	0/0:15,0:8:5.42:0,5,23	0/0:15,0:12:4:0,4,15	0/0:29,0:27:13.83:0,14,62	0/0:17,0:16:8.29:0,8,37	0/1:15,0:14:2.96:52,0,3	0/0:23,0:19:18.61:0,19,81	0/0:8,0:6:5.49:0,5,24
chr10	20717519	.	G	GA	1168.67	PASS	AB=0.958;AC=12;AF=0.214;AN=56;BaseQRankSum=-0.539;DP=302;FS=21.651;HRun=1;HaplotypeScore=54.6201;InbreedingCoeff=0.6953;MQ=50.06;MQ0=0;MQRankSum=-0.143;QD=20.15;ReadPosRankSum=1.647;VQSLOD=2.4034;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:19:36.12:0,36,467	1/1:0,2:2:6.02:90,6,0	0/1:10,0:7:3.85:4,0,201	0/0:14,0:8:21.06:0,21,273	1/1:0,9:9:27.05:379,27,0	0/0:6,0:5:9.03:0,9,117	0/0:15,0:15:33.11:0,33,428	0/0:29,0:29:78.24:0,78,998	0/0:6,0:6:18.06:0,18,233	1/1:0,7:7:21.07:315,21,0	1/1:0,9:9:24:309,24,0	0/0:9,0:9:18.06:0,18,233	0/0:5,0:3:6.01:0,6,78	0/0:10,0:7:18.06:0,18,234	1/1:0,10:9:15.05:224,15,0	0/0:13,0:8:21.07:0,21,272	0/0:26,0:26:63.20:0,63,817	0/0:15,0:14:36.12:0,36,466	0/0:13,0:13:36.08:0,36,429	0/0:4,0:4:12.04:0,12,156	0/0:18,0:18:42.12:0,42,531	0/0:1,0:1:3.01:0,3,39	0/0:2,0:2:6.02:0,6,78	0/0:17,0:17:27.09:0,27,350	0/0:6,0:6:18.06:0,18,234	0/1:10,1:9:17.90:18,0,281	0/0:10,0:9:27.09:0,27,345	0/0:5,0:5:15.05:0,15,195
chr10	20717679	.	AT	A	430.56	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=7.822;DP=365;FS=5.299;HRun=1;HaplotypeScore=44.9161;InbreedingCoeff=0.6836;MQ=52.60;MQ0=18;MQRankSum=-4.164;QD=10.76;ReadPosRankSum=-1.611;VQSLOD=0.9152;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:47.19:0,47,758	1/1:1,2:3:8.97:77,9,0	0/0:21,0:7:6.41:0,6,150	0/0:19,0:6:11.46:0,11,61	1/1:3,11:14:29.77:227,30,0	0/0:16,0:15:44.79:0,45,533	0/0:8,0:7:18.06:0,18,243	0/0:32,0:28:68.26:0,68,927	0/0:5,0:5:9.03:0,9,123	1/1:2,7:8:20.91:163,21,0	1/1:1,4:4:5.98:48,6,0	0/0:10,0:10:27.05:0,27,322	0/1:2,0:2:2.06:2,0,16	0/0:4,0:2:3:0,3,25	1/1:4,3:7:8.96:70,9,0	0/0:13,0:8:0.23:0,0,238	0/0:19,0:19:55.75:0,56,621	0/0:28,0:26:67.30:0,67,814	0/0:24,0:23:33.54:0,34,669	0/0:11,0:10:18.04:0,18,216	0/0:7,0:7:15.03:0,15,187	0/0:1,0:1:3.01:0,3,41	0/0:4,0:4:12.03:0,12,147	0/0:2,0:1:3.01:0,3,41	0/0:16,0:16:48.01:0,48,567	0/0:19,0:15:43.30:0,43,514	0/0:22,0:18:49.34:0,49,518	0/0:17,0:14:42.12:0,42,554
chr10	20717682	.	AAT	A	472.99	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=7.596;DP=374;FS=26.068;HRun=0;HaplotypeScore=50.4311;InbreedingCoeff=0.7872;MQ=52.53;MQ0=18;MQRankSum=-5.337;QD=10.75;ReadPosRankSum=-0.572;VQSLOD=1.5003;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:66.20:0,66,1174	1/1:1,2:3:8.96:75,9,0	0/0:21,0:7:17.50:0,17,209	0/0:18,0:6:13.45:0,13,133	1/1:6,9:15:26.70:220,27,0	0/0:17,0:16:42.14:0,42,787	0/0:8,0:7:18.06:0,18,341	0/0:34,0:29:87.28:0,87,1503	0/0:6,0:6:11.96:0,12,188	1/1:5,6:10:23.90:201,24,0	1/1:4,3:6:8.86:67,9,0	0/0:10,0:10:30.10:0,30,543	0/0:2,0:2:2.99:0,3,24	0/0:3,0:1:3.01:0,3,38	1/1:5,3:8:8.96:70,9,0	0/0:13,0:8:23.44:0,23,400	0/0:19,0:19:57.20:0,57,1045	0/0:28,0:26:72.24:0,72,1282	0/0:23,0:22:46.15:0,46,1029	0/0:11,0:9:24.06:0,24,368	0/0:6,0:6:15.05:0,15,268	0/0:1,0:1:3.01:0,3,57	0/0:5,0:5:12.51:0,13,228	0/0:2,0:1:3.01:0,3,57	0/0:16,0:16:48.16:0,48,882	0/0:19,0:15:45.14:0,45,792	0/0:23,0:19:51.84:0,52,923	0/0:18,0:15:45.15:0,45,836
chr10	20717692	.	T	TAA	737.87	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=6.392;DP=415;FS=26.892;HRun=14;HaplotypeScore=59.3727;InbreedingCoeff=0.6273;MQ=54.33;MQ0=14;MQRankSum=-3.960;QD=9.22;ReadPosRankSum=-3.430;VQSLOD=-0.5984;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:32:35.73:0,36,407	1/1:2,1:3:9.01:100,9,0	0/1:27,0:10:15.16:15,0,18	0/0:22,0:10:11.28:0,11,75	1/1:10,5:16:26.73:264,27,0	0/0:17,0:18:21.97:0,22,216	0/0:10,0:10:14.67:0,15,145	0/0:35,0:32:4.67:0,5,316	0/0:6,0:7:11.58:0,12,75	1/1:9,7:15:30.94:348,31,0	1/1:6,2:7:8.94:89,9,0	0/0:10,0:11:17.13:0,17,174	0/0:1,0:2:2.74:0,3,12	0/0:1,0:1:3:0,3,25	1/1:4,5:10:9.64:85,10,0	0/0:10,0:7:20.96:0,21,172	0/0:16,0:19:33.38:0,33,279	0/0:29,0:29:19.77:0,20,394	0/0:25,0:23:31.67:0,32,338	0/0:8,0:8:14.54:0,15,112	0/0:7,0:7:17.91:0,18,150	0/0:2,0:2:3:0,3,25	0/0:6,0:7:2.26:0,2,64	0/0:2,0:1:3:0,3,25	0/0:15,0:16:37.90:0,38,282	0/0:18,0:18:21.97:0,22,217	0/0:23,0:21:5.76:0,6,287	0/0:23,0:21:12.96:0,13,303
chr10	20719395	.	AC	A	3595.85	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=11.350;DP=726;FS=12.961;HRun=1;HaplotypeScore=71.7538;InbreedingCoeff=0.9999;MQ=76.74;MQ0=0;MQRankSum=-1.600;QD=39.95;ReadPosRankSum=-0.027;VQSLOD=2.9562;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,108,1711	1/1:0,12:12:36.12:503,36,0	0/0:18,0:18:54.17:0,54,808	0/0:28,0:28:78.24:0,78,1160	1/1:0,29:29:81.27:1133,81,0	0/0:25,0:25:75.26:0,75,1195	0/0:29,0:29:87.30:0,87,1387	0/0:42,0:42:99:0,126,1959	0/0:28,0:28:84.29:0,84,1335	1/1:1,32:33:96.32:1330,96,0	1/1:0,16:16:45.15:629,45,0	0/0:29,0:29:84.27:0,84,1318	0/0:28,0:28:84.29:0,84,1339	0/0:30,0:30:90.29:0,90,1411	0/0:32,0:32:96.33:0,96,1528	0/0:33,0:33:99:0,99,1560	0/0:24,0:24:69.23:0,69,1093	0/0:21,0:21:63.21:0,63,1006	0/0:17,0:17:51.17:0,51,809	0/0:25,0:25:75.26:0,75,1193	0/0:36,0:36:99:0,105,1668	0/0:24,0:24:72.25:0,72,1140	0/0:16,0:16:48.15:0,48,743	0/0:20,0:20:60.19:0,60,935	0/0:32,0:32:96.33:0,96,1531	0/0:25,1:26:36.24:0,36,1084	0/0:23,0:23:69.21:0,69,1077	0/0:13,0:13:39.10:0,39,575
chr10	20720423	.	C	CA	8294.29	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-3.536;DP=523;FS=1.625;HRun=6;HaplotypeScore=112.0157;InbreedingCoeff=0.9776;MQ=77.51;MQ0=2;MQRankSum=-6.040;QD=29.31;ReadPosRankSum=1.003;VQSLOD=4.2956;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,18:21:51.04:587,51,0	0/0:10,0:10:30.06:0,30,302	0/0:25,0:19:5.24:0,5,378	0/0:34,0:23:32.82:0,33,337	0/0:21,0:21:51.09:0,51,514	1/1:6,11:17:39.09:471,39,0	1/1:4,10:14:36.11:450,36,0	1/1:8,20:28:66.20:819,66,0	1/1:3,14:17:45.10:548,45,0	0/0:24,0:24:63.07:0,63,620	0/0:21,0:21:53.69:0,54,523	1/1:4,15:19:45.14:566,45,0	1/1:6,9:15:33.05:385,33,0	1/1:4,6:10:27.06:313,27,0	0/0:24,0:23:63.14:0,63,642	0/0:21,0:21:51.10:0,51,514	0/0:27,0:27:60.06:0,60,594	0/0:14,0:14:32.94:0,33,321	0/0:16,0:16:42.08:0,42,424	1/1:8,17:25:57.17:703,57,0	1/1:6,10:16:33.07:398,33,0	1/1:3,8:11:24.08:302,24,0	1/1:2,12:14:39.12:490,39,0	1/1:5,15:19:39.08:473,39,0	1/1:3,12:15:39.12:490,39,0	1/1:4,13:17:42.13:526,42,0	1/1:6,12:18:51.13:622,51,0	1/1:0,4:4:12.04:151,12,0
chr10	20720441	.	C	CA	4200.37	PASS	AB=0.756;AC=41;AF=0.732;AN=56;BaseQRankSum=5.121;DP=613;FS=1.517;HRun=14;HaplotypeScore=186.0222;InbreedingCoeff=0.6516;MQ=67.33;MQ0=10;MQRankSum=-6.255;QD=9.75;ReadPosRankSum=-2.146;VQSLOD=0.5557;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:26,4:29:9.97:244,10,0	1/1:10,0:12:12.64:97,13,0	0/0:43,0:21:11.26:0,11,87	0/0:55,1:24:19.16:0,19,103	1/1:19,1:27:35.72:200,36,0	1/1:7,6:15:35.63:279,36,0	1/1:15,4:19:35.79:285,36,0	1/1:14,7:21:13.54:223,14,0	1/1:9,7:16:27.80:236,28,0	1/1:25,2:30:22.68:174,23,0	1/1:18,0:21:16.04:93,16,0	1/1:17,7:24:19.44:295,19,0	1/1:9,4:13:17.42:138,17,0	0/1:8,2:10:4.76:61,0,5	1/1:31,0:32:36.17:192,36,0	0/0:20,0:22:33.19:0,33,196	0/0:26,1:27:23.59:0,24,275	0/0:14,1:15:0.10:0,0,123	0/0:15,0:15:28.26:0,28,191	1/1:16,6:24:4.36:216,4,0	0/1:5,5:9:1.26:114,0,1	0/1:7,3:9:20.01:80,0,20	1/1:16,5:22:29.58:243,30,0	1/1:17,3:19:22.21:199,22,0	1/1:10,7:17:16.53:254,17,0	1/1:15,9:25:41.18:331,41,0	1/1:18,5:24:9.70:211,10,0	1/1:4,1:5:5.37:35,5,0
chr10	20720452	.	AAAAC	A	1455.64	PASS	AB=0.985;AC=19;AF=0.339;AN=56;BaseQRankSum=5.867;DP=621;FS=23.639;HRun=0;HaplotypeScore=176.8226;InbreedingCoeff=-0.1963;MQ=61.25;MQ0=15;MQRankSum=-4.290;QD=4.68;ReadPosRankSum=2.531;VQSLOD=0.8729;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:36,1:35:95.17:95,0,191	0/0:9,0:9:24.54:0,25,352	0/0:49,0:18:37.61:0,38,330	0/0:56,0:22:8.55:0,9,222	0/0:26,0:25:12.42:0,12,636	1/1:19,0:18:0.64:185,1,0	0/1:18,0:18:75.56:100,0,76	0/1:26,1:27:99:133,0,123	1/1:15,0:15:4.52:122,5,0	0/0:26,0:25:26.33:0,26,580	0/0:21,0:21:29.66:0,30,464	0/1:24,0:23:94.57:95,0,109	0/1:14,0:14:36.71:42,0,37	0/1:10,0:10:24.41:24,0,74	0/0:31,0:30:26.34:0,26,675	0/0:21,0:21:59.84:0,60,1057	0/0:27,0:27:78.10:0,78,1473	0/0:18,0:18:50.65:0,51,757	0/0:19,0:18:44.22:0,44,668	0/1:18,1:19:73.89:119,0,74	0/1:10,0:9:44.34:69,0,44	0/1:10,0:9:28.96:29,0,50	0/1:21,0:21:55.29:144,0,55	0/1:19,1:19:48.94:104,0,49	1/1:16,0:14:1.02:122,1,0	0/1:26,0:25:56.60:106,0,57	0/1:24,1:25:99:126,0,120	0/0:7,0:7:0.55:0,1,33
chr10	20720463	.	AAAC	A	4017.52	PASS	AB=1.000;AC=35;AF=0.625;AN=56;BaseQRankSum=5.141;DP=619;FS=29.589;HRun=0;HaplotypeScore=155.3148;InbreedingCoeff=0.8485;MQ=58.44;MQ0=16;MQRankSum=-3.313;QD=10.71;ReadPosRankSum=-1.680;VQSLOD=1.6232;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:38,1:37:80.14:483,80,0	0/0:10,0:11:0.58:0,1,132	0/0:43,0:16:24.28:0,24,350	0/1:55,0:22:20.21:20,0,175	0/0:26,0:25:3.64:0,4,304	1/1:17,0:16:46.59:325,47,0	1/1:20,0:20:36.82:228,37,0	1/1:30,0:30:74.66:434,75,0	1/1:14,0:14:16.99:158,17,0	0/0:25,0:25:18.11:0,18,361	0/0:19,0:19:33.26:0,33,303	1/1:21,0:20:15.21:223,15,0	1/1:18,0:18:29.61:196,30,0	1/1:10,0:10:29:174,29,0	0/0:32,0:31:45.97:0,46,390	0/0:23,0:23:69.20:0,69,1225	0/0:29,0:29:84.26:0,84,1565	0/0:18,0:18:51.16:0,51,929	0/0:16,0:16:28.06:0,28,742	1/1:15,0:15:12.56:167,13,0	1/1:10,0:8:14.35:76,14,0	1/1:7,0:6:17.25:91,17,0	1/1:18,1:19:26.27:224,26,0	1/1:21,0:19:17.35:202,17,0	1/1:18,0:16:28.68:141,29,0	1/1:27,1:28:64.80:421,65,0	1/1:23,1:24:48.77:327,49,0	1/1:8,0:8:22.29:129,22,0
chr10	20720464	.	AAC	A	9816.38	PASS	AB=1.000;AC=38;AF=0.679;AN=56;BaseQRankSum=3.123;DP=621;FS=24.821;HRun=0;HaplotypeScore=125.2426;InbreedingCoeff=0.6471;MQ=58.57;MQ0=15;MQRankSum=-3.958;QD=21.53;ReadPosRankSum=-1.188;VQSLOD=2.7129;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,31:37:91.17:1211,91,0	0/0:11,0:11:0.50:0,0,42	0/0:44,0:17:10.33:0,10,301	0/1:54,0:22:29.68:30,0,153	0/1:26,0:25:4.59:5,0,115	1/1:4,13:16:48.02:632,48,0	1/1:4,16:20:41.78:574,42,0	1/1:10,20:30:79.36:1057,79,0	1/1:5,9:14:26.14:317,26,0	0/1:25,0:25:13.08:13,0,162	0/0:19,0:19:28.33:0,28,183	1/1:15,6:20:40.88:628,41,0	1/1:2,16:18:33.98:437,34,0	1/1:3,7:10:30.06:425,30,0	0/1:33,0:32:20.58:21,0,151	0/0:24,0:24:72.19:0,72,1041	0/0:30,0:30:87.23:0,87,1304	0/0:18,0:18:51.12:0,51,777	0/0:17,0:17:30.86:0,31,625	1/1:4,11:15:40.60:521,41,0	1/1:3,6:7:18.02:247,18,0	1/1:0,7:6:18.06:273,18,0	1/1:4,15:19:44.24:567,44,0	1/1:10,11:19:41.85:497,42,0	1/1:2,15:15:31.35:444,31,0	1/1:10,19:28:73.16:838,73,0	1/1:11,13:24:62.91:735,63,0	1/1:1,7:8:24.07:344,24,0
chr10	20720465	.	AC	A	6552.62	PASS	AB=0.982;AC=42;AF=0.750;AN=56;BaseQRankSum=8.018;DP=619;FS=1.225;HRun=1;HaplotypeScore=126.3778;InbreedingCoeff=0.6255;MQ=59.91;MQ0=15;MQRankSum=-4.702;QD=13.62;ReadPosRankSum=-0.079;VQSLOD=3.9205;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:37,2:37:90.81:718,91,0	1/1:12,0:12:18.88:94,19,0	0/0:45,1:18:13.30:0,13,315	0/1:47,4:21:31.31:31,0,114	1/1:27,0:26:18.13:122,18,0	1/1:17,0:16:47.78:370,48,0	1/1:17,2:19:41.88:355,42,0	1/1:26,2:28:77.80:633,78,0	1/1:12,2:14:28.15:219,28,0	0/1:25,0:25:45.03:111,0,45	0/1:19,0:19:7.62:8,0,41	1/1:18,4:21:56.53:444,57,0	1/1:18,0:18:34.44:275,34,0	1/1:8,2:10:29.92:246,30,0	0/1:33,0:32:27.29:136,0,27	0/0:24,0:24:70.70:0,71,820	0/0:31,0:31:90.11:0,90,1043	0/0:19,0:19:52.69:0,53,617	0/0:18,0:18:30.49:0,30,492	1/1:16,0:16:39.34:341,39,0	1/1:8,0:6:17.92:138,18,0	1/1:7,0:6:17.95:143,18,0	1/1:18,1:19:44.75:343,45,0	1/1:19,0:17:41.37:302,41,0	1/1:17,0:15:31.18:252,31,0	1/1:27,1:27:73.21:575,73,0	1/1:23,2:25:64.43:488,64,0	1/1:8,0:8:23.97:207,24,0
chr10	20724846	.	C	CT	1180	PASS	AB=0.835;AC=13;AF=0.232;AN=56;BaseQRankSum=-0.537;DP=611;FS=0.983;HRun=13;HaplotypeScore=81.8020;InbreedingCoeff=0.3128;MQ=67.29;MQ0=3;MQRankSum=1.037;QD=6.34;ReadPosRankSum=-1.756;VQSLOD=2.3090;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,3:34:21.14:0,21,422	0/1:3,8:11:2.56:122,0,3	0/0:13,0:10:4.37:0,4,23	0/0:14,1:11:6.92:0,7,45	1/1:8,21:29:47.85:393,48,0	0/0:12,0:12:35.70:0,36,246	0/1:14,1:15:13.58:14,0,152	0/0:30,1:32:19.82:0,20,269	0/1:11,1:12:8.01:8,0,88	1/1:6,16:22:32.76:264,33,0	1/1:2,10:13:26.81:225,27,0	0/1:18,1:19:8.47:8,0,201	0/0:16,0:15:15.55:0,16,139	0/0:17,0:18:26.71:0,27,184	0/1:8,17:24:19.65:265,0,20	0/0:25,1:27:31.12:0,31,351	0/0:43,1:45:33.66:0,34,537	0/0:22,1:24:21.42:0,21,323	0/0:22,0:23:33.65:0,34,216	0/0:22,1:23:4.64:0,5,171	0/1:18,2:21:21.55:22,0,154	0/0:21,0:21:32.48:0,32,220	0/0:19,0:19:26.54:0,27,184	0/0:34,0:38:92.26:0,92,608	0/0:29,0:31:67.34:0,67,456	0/1:16,1:17:26.96:27,0,82	0/0:25,0:26:25.28:0,25,274	0/0:5,0:5:8.91:0,9,62
chr10	20727001	.	C	CA	3448.13	PASS	AB=1.000;AC=42;AF=0.750;AN=56;BaseQRankSum=3.894;DP=488;FS=1.303;HRun=9;HaplotypeScore=113.4934;InbreedingCoeff=0.6690;MQ=51.24;MQ0=12;MQRankSum=-4.964;QD=9.58;ReadPosRankSum=-0.005;VQSLOD=2.2467;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:30,1:30:9.75:230,10,0	1/1:3,0:3:0.47:1,0,0	0/0:34,0:8:5.11:0,5,25	0/0:20,0:3:6.31:0,6,27	1/1:12,0:12:1.79:4,2,0	1/1:16,0:16:32.74:251,33,0	1/1:17,3:20:35.68:297,36,0	1/1:17,4:21:24.56:272,25,0	1/1:17,0:16:19.34:138,19,0	1/1:12,0:12:0.14:7,0,0	0/1:7,0:7:0:0,0,0	1/1:14,0:14:17.48:156,17,0	1/1:21,1:22:17.96:174,18,0	1/1:14,0:13:14.35:120,14,0	0/0:9,0:9:2.86:0,3,8	0/0:14,0:14:23.95:0,24,208	0/0:35,0:35:40.88:0,41,355	0/1:22,0:22:15.94:16,0,177	0/0:16,0:16:32.86:0,33,274	1/1:15,2:15:36.02:347,36,0	1/1:22,1:21:29.39:239,29,0	1/1:11,0:10:2.99:24,3,0	1/1:13,0:13:18.77:143,19,0	1/1:21,2:20:13.86:183,14,0	1/1:22,0:21:38.75:306,39,0	1/1:16,0:16:26.24:218,26,0	1/1:17,0:16:29.29:217,29,0	1/1:6,0:6:11.99:106,12,0
chr10	20727009	.	AAC	A	3004.94	PASS	AB=1.000;AC=42;AF=0.750;AN=56;BaseQRankSum=7.643;DP=526;FS=0.441;HRun=0;HaplotypeScore=106.6723;InbreedingCoeff=0.6513;MQ=52.34;MQ0=17;MQRankSum=-4.373;QD=8.37;ReadPosRankSum=0.424;VQSLOD=3.4066;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:35,0:34:37.96:275,38,0	1/1:3,0:3:3.46:25,3,0	0/0:43,0:9:2.80:0,3,33	0/0:28,0:7:1.17:0,1,56	1/1:10,0:10:10.75:49,11,0	1/1:19,1:20:46.72:279,47,0	1/1:20,0:20:27.59:166,28,0	1/1:29,0:28:17.16:176,17,0	1/1:15,0:14:0.80:78,1,0	1/1:11,0:11:16.37:116,16,0	1/1:5,0:5:0.94:2,1,0	1/1:17,0:16:26.85:121,27,0	0/1:15,0:15:4.96:61,0,5	0/1:14,0:13:5.35:71,0,5	1/1:10,3:13:32.65:290,33,0	0/0:15,0:15:24.93:0,25,431	0/0:35,0:35:42.36:0,42,745	0/0:24,0:23:41.50:0,41,542	0/0:22,0:22:18.44:0,18,408	1/1:19,0:17:36.66:227,37,0	1/1:17,0:15:23.06:120,23,0	1/1:8,0:7:10.07:47,10,0	1/1:14,0:13:25.96:132,26,0	1/1:22,1:20:27.02:132,27,0	1/1:23,0:21:40.76:261,41,0	1/1:19,0:16:8.42:188,8,0	1/1:20,0:19:40.80:241,41,0	1/1:9,0:9:17.48:121,17,0
chr10	20727010	.	AC	A	5066.90	PASS	AB=0.936;AC=46;AF=0.821;AN=56;BaseQRankSum=6.878;DP=528;FS=7.137;HRun=1;HaplotypeScore=96.0487;InbreedingCoeff=0.6883;MQ=52.34;MQ0=18;MQRankSum=-3.317;QD=11.70;ReadPosRankSum=0.731;VQSLOD=2.9598;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:22,13:34:41.12:410,41,0	1/1:4,0:4:4.24:28,4,0	0/1:40,3:9:4.37:4,0,25	0/1:28,2:8:8.81:9,0,46	1/1:11,0:11:18.44:92,18,0	1/1:14,6:20:51.21:432,51,0	1/1:12,8:20:39.39:319,39,0	1/1:20,8:27:23.13:298,23,0	1/1:12,2:14:30.90:225,31,0	1/1:9,1:10:22.40:161,22,0	1/1:5,1:6:4.93:13,5,0	1/1:15,2:16:31.10:199,31,0	1/1:12,3:15:17.96:127,18,0	1/1:11,3:13:8.67:139,9,0	1/1:13,0:13:32.72:268,33,0	0/0:15,0:15:14.61:0,15,318	0/0:34,0:34:19.40:0,19,497	0/0:24,0:23:25.70:0,26,344	0/0:22,0:22:3.78:0,4,317	1/1:17,2:17:41.81:346,42,0	1/1:15,2:15:30.69:232,31,0	1/1:1,7:7:10.43:63,10,0	1/1:11,3:13:28.27:198,28,0	1/1:23,1:21:34.16:218,34,0	1/1:10,13:21:41.42:415,41,0	1/1:13,6:16:21.91:290,22,0	1/1:14,6:19:51.37:418,51,0	1/1:6,2:8:17.58:163,18,0
chr10	20727011	.	CAA	C	2661.87	PASS	AB=0.905;AC=29;AF=0.518;AN=56;BaseQRankSum=7.107;DP=540;FS=3.853;HRun=13;HaplotypeScore=111.2759;InbreedingCoeff=0.3695;MQ=52.30;MQ0=19;MQRankSum=-3.027;QD=8.04;ReadPosRankSum=2.110;VQSLOD=1.9067;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:29,6:34:42.66:347,43,0	0/0:6,0:6:5.93:0,6,40	0/0:42,0:10:6.57:0,7,60	0/0:30,0:8:5.68:0,6,100	0/0:12,0:11:18.93:0,19,108	1/1:17,3:20:8.29:284,8,0	0/1:19,0:19:14.07:69,0,14	0/1:23,6:28:4.21:241,0,4	0/1:12,3:14:55.23:111,0,55	0/0:14,0:14:5.09:0,5,75	0/0:6,0:6:5.93:0,6,40	0/1:15,2:16:12.53:86,0,13	0/1:13,2:15:63.17:67,0,63	0/1:13,1:13:30.96:60,0,31	1/1:13,0:13:6.26:47,6,0	0/0:15,0:15:38.48:0,38,489	0/0:31,0:33:83.80:0,84,981	0/0:25,0:24:59.53:0,60,778	0/0:19,0:23:37.07:0,37,389	1/1:16,4:18:18.49:250,18,0	1/1:18,0:16:2.29:69,2,0	1/1:7,1:7:11.95:94,12,0	1/1:13,1:13:11.06:152,11,0	0/1:23,1:21:21.78:50,0,22	1/1:18,5:21:38.10:255,38,0	1/1:16,3:16:5.87:271,6,0	1/1:14,6:19:11.09:251,11,0	1/1:7,1:8:17.97:151,18,0
chr10	20727024	.	AC	A	3161.73	PASS	AB=0.971;AC=40;AF=0.714;AN=56;BaseQRankSum=6.978;DP=562;FS=9.862;HRun=1;HaplotypeScore=104.6967;InbreedingCoeff=0.4348;MQ=54.61;MQ0=18;MQRankSum=-7.013;QD=7.34;ReadPosRankSum=2.823;VQSLOD=0.1794;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:33,0:32:1.75:280,2,0	1/1:1,5:6:13.40:82,13,0	0/1:38,7:8:2.59:3,0,53	0/0:30,0:11:14.37:0,14,70	1/1:12,1:12:16.68:116,17,0	1/1:25,0:25:14.17:232,14,0	1/1:18,0:18:7.15:76,7,0	1/1:29,0:28:18.89:194,19,0	0/1:18,0:17:33.26:121,0,33	1/1:3,17:20:47.78:377,48,0	1/1:2,4:6:8.90:60,9,0	0/1:16,0:15:14.77:48,0,15	0/1:13,0:13:1.03:63,0,1	0/1:16,0:15:13.05:107,0,13	1/1:13,0:13:29.11:198,29,0	0/0:13,0:13:38.99:0,39,371	0/0:31,0:31:57.33:0,57,597	0/0:33,0:32:78.37:0,78,660	0/0:24,0:23:4.66:0,5,279	1/1:18,0:16:28.61:188,29,0	1/1:16,0:16:5.61:108,6,0	1/1:7,0:6:13.18:115,13,0	1/1:15,0:14:17.68:136,18,0	0/1:22,1:20:6.14:61,0,6	1/1:25,0:23:23.06:219,23,0	1/1:22,1:20:26.09:274,26,0	1/1:24,0:23:3.41:191,3,0	1/1:8,0:8:15.30:89,15,0
chr10	20727025	.	C	CA	2430.56	PASS	AB=0.995;AC=35;AF=0.625;AN=56;BaseQRankSum=7.983;DP=564;FS=1.479;HRun=13;HaplotypeScore=107.9906;InbreedingCoeff=0.3772;MQ=55.13;MQ0=18;MQRankSum=-1.224;QD=6.20;ReadPosRankSum=3.272;VQSLOD=2.7282;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:33,0:32:1.06:199,1,0	0/0:5,0:5:0.20:0,0,0	0/0:44,0:8:6.09:0,6,22	0/1:29,1:12:13.60:14,0,61	1/1:12,0:11:0.50:1,0,0	1/1:25,0:25:56.35:288,56,0	1/1:19,0:19:6.07:115,6,0	1/1:28,0:28:1.62:123,2,0	0/1:18,0:17:8.03:122,0,8	0/0:21,0:20:2.75:0,3,8	0/1:6,0:6:0:0,0,0	0/1:16,0:15:15.43:49,0,15	1/1:13,0:13:20.22:117,20,0	0/1:16,0:15:16.40:90,0,16	1/1:2,12:14:29.26:268,29,0	0/0:13,0:13:35.86:0,36,278	0/0:29,0:30:54.84:0,55,408	0/0:33,0:32:79.73:0,80,597	0/0:26,0:25:12.33:0,12,256	1/1:18,0:16:36.89:188,37,0	1/1:16,0:16:28.96:147,29,0	1/1:7,0:6:10.50:70,11,0	1/1:15,0:14:27.74:131,28,0	1/1:23,0:20:28.44:150,28,0	1/1:25,0:23:10.30:178,10,0	0/1:25,0:22:0.18:121,0,0	0/1:24,0:23:31.39:165,0,31	1/1:8,0:8:11.45:63,11,0
chr10	20727036	.	A	AC	7162.45	PASS	AB=0.873;AC=35;AF=0.625;AN=56;BaseQRankSum=4.986;DP=556;FS=0.791;HRun=2;HaplotypeScore=93.6950;InbreedingCoeff=0.7879;MQ=67.86;MQ0=9;MQRankSum=-2.668;QD=19.05;ReadPosRankSum=5.297;VQSLOD=4.9441;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:15,16:31:58.72:643,59,0	0/0:7,0:7:17.67:0,18,113	0/0:33,0:12:4.72:0,5,133	0/1:29,0:20:1.05:1,0,233	0/0:11,0:10:17.51:0,18,123	1/1:13,14:27:72.17:849,72,0	1/1:1,16:18:28.33:336,28,0	1/1:19,11:30:49.01:605,49,0	1/1:9,8:17:39.54:437,40,0	0/0:21,0:20:41.63:0,42,331	0/0:6,0:6:11.50:0,12,74	0/1:5,8:12:1.13:165,0,1	1/1:2,12:15:20.90:236,21,0	1/1:9,6:15:13.66:310,14,0	0/1:16,0:16:20.38:45,0,20	0/0:14,0:14:42.01:0,42,447	0/0:27,0:27:55.93:0,56,707	0/0:35,0:34:93.15:0,93,1058	0/0:25,0:24:47.70:0,48,553	1/1:9,9:17:51.11:608,51,0	1/1:10,8:18:39.05:449,39,0	1/1:4,4:7:20.85:186,21,0	1/1:7,7:13:33.08:403,33,0	1/1:5,17:19:30.09:383,30,0	1/1:8,20:26:26.45:468,26,0	1/1:9,16:22:7.35:439,7,0	1/1:7,15:22:14.21:443,14,0	1/1:4,2:6:12.04:156,12,0
chr10	20728292	.	C	CA	479.81	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-5.754;DP=696;FS=7.239;HRun=4;HaplotypeScore=66.2020;InbreedingCoeff=0.9994;MQ=89.65;MQ0=0;MQRankSum=-1.491;QD=28.22;ReadPosRankSum=1.321;VQSLOD=3.4465;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,117,1327	0/0:13,0:12:33.09:0,33,374	0/0:32,0:32:87.21:0,87,962	0/0:22,0:22:48.90:0,49,555	0/0:22,0:22:60.15:0,60,670	0/0:20,0:20:60.17:0,60,681	0/0:29,0:29:78.19:0,78,865	0/0:26,0:26:72.21:0,72,817	0/0:29,0:29:84.22:0,84,942	0/0:29,0:29:81.23:0,81,919	0/0:13,0:13:39.11:0,39,442	0/0:28,0:28:81.20:0,81,899	0/0:21,0:21:57.14:0,57,637	0/0:19,0:19:57.16:0,57,646	1/1:0,17:17:42.14:575,42,0	0/0:28,0:28:75.20:0,75,842	0/0:29,0:29:87.23:0,87,977	0/0:36,0:35:99:0,99,1112	0/0:21,0:21:57.15:0,57,640	0/0:13,0:13:36.10:0,36,407	0/0:32,0:32:93.25:0,93,1045	0/0:16,0:16:42.12:0,42,476	0/0:23,0:23:57.16:0,57,646	0/0:31,0:31:87.23:0,87,976	0/0:30,0:30:84.22:0,84,941	0/0:35,0:35:96.26:0,96,1081	0/0:24,0:24:60.17:0,60,680	0/0:14,0:14:39.05:0,39,417
chr10	20730557	.	A	AG	20728.03	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-10.088;DP=644;FS=3.396;HRun=1;HaplotypeScore=71.8739;InbreedingCoeff=0.9963;MQ=73.61;MQ0=0;MQRankSum=-4.737;QD=39.63;ReadPosRankSum=4.691;VQSLOD=5.5013;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,40:43:99:1781,120,0	1/1:0,8:8:24.08:360,24,0	0/0:20,0:20:43.96:0,44,678	0/0:21,0:20:54.06:0,54,660	1/1:0,31:31:87.29:1304,87,0	1/1:0,14:14:33.11:495,33,0	1/1:0,30:30:84.28:1259,84,0	1/1:3,29:32:90.23:1261,90,0	1/1:2,20:22:60.20:892,60,0	1/1:1,23:24:66.20:959,66,0	1/1:3,22:25:48.14:719,48,0	1/1:0,20:20:57.19:854,57,0	1/1:1,19:21:54.18:799,54,0	1/1:0,22:22:60.20:898,60,0	1/1:0,25:25:60.20:899,60,0	0/0:21,0:21:63.20:0,63,818	0/0:30,0:29:87.28:0,87,1130	0/0:13,0:13:33.11:0,33,428	0/0:16,0:16:48.16:0,48,623	1/1:0,25:25:69.19:1009,69,0	1/1:0,34:35:93.32:1394,93,0	1/1:0,22:22:57.19:854,57,0	1/1:1,14:15:42.14:629,42,0	1/1:1,32:33:87.29:1304,87,0	1/1:1,25:26:72.24:1079,72,0	1/1:1,19:20:57.19:855,57,0	1/1:1,20:21:60.20:899,60,0	1/1:0,9:8:15.05:225,15,0
chr10	20731940	.	T	TAC	14155.56	PASS	AB=0.603;AC=32;AF=0.571;AN=56;BaseQRankSum=-9.469;DP=701;FS=12.334;HRun=0;HaplotypeScore=95.1803;InbreedingCoeff=0.8827;MQ=74.66;MQ0=1;MQRankSum=-4.213;QD=32.17;ReadPosRankSum=3.476;VQSLOD=6.4043;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,26:34:71.96:1112,72,0	0/0:9,0:9:27.08:0,27,332	0/0:34,0:33:64.33:0,64,809	0/0:28,0:28:53.95:0,54,624	0/0:29,0:29:75.23:0,75,922	1/1:2,23:27:69.24:1126,69,0	1/1:9,20:31:20.26:844,20,0	1/1:9,19:31:32.21:929,32,0	1/1:8,22:30:29.28:962,29,0	0/0:19,0:20:50.97:0,51,585	0/0:24,0:24:60.19:0,60,738	1/1:9,10:19:30.10:474,30,0	1/1:6,16:23:54.18:868,54,0	1/1:7,15:22:11.26:697,11,0	0/0:28,0:28:78.19:0,78,911	0/0:13,0:13:36.10:0,36,433	0/0:30,0:30:84.20:0,84,990	0/0:23,0:23:27.26:0,27,564	0/0:23,0:23:51.16:0,51,628	1/1:5,17:22:36.12:587,36,0	1/1:3,11:16:33.11:538,33,0	1/1:3,14:18:42.14:685,42,0	1/1:6,21:27:63.22:1028,63,0	1/1:3,20:23:63.22:1025,63,0	1/1:5,14:19:33.11:538,33,0	0/1:15,29:44:14.51:1298,0,15	1/1:9,23:33:26.27:942,26,0	0/1:7,12:20:0.81:502,0,1
chr10	20732803	.	TA	T	440.43	PASS	AB=0.922;AC=5;AF=0.089;AN=56;BaseQRankSum=6.632;DP=547;FS=8.118;HRun=11;HaplotypeScore=53.4356;InbreedingCoeff=0.3690;MQ=57.38;MQ0=6;MQRankSum=-0.159;QD=9.79;ReadPosRankSum=-0.756;VQSLOD=1.8066;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,105,1091	0/0:7,0:7:4.37:0,4,140	0/1:3,0:2:0.61:1,0,27	0/1:5,1:3:22.81:27,0,23	0/0:26,0:25:32.83:0,33,504	0/0:15,0:15:30.06:0,30,312	0/0:10,0:10:21.05:0,21,224	0/0:39,0:31:66.01:0,66,653	0/0:19,0:20:50.56:0,51,493	0/0:21,0:21:51.13:0,51,544	0/0:13,0:13:27.04:0,27,269	0/0:18,0:18:42.08:0,42,432	0/0:14,1:15:8.43:0,8,290	0/0:20,0:20:48.08:0,48,499	1/1:1,25:26:62.93:517,63,0	0/0:23,0:23:66.17:0,66,704	0/0:36,1:37:59.77:0,60,839	0/0:20,2:22:13.44:0,13,321	0/0:15,1:15:14.47:0,14,359	0/0:13,0:14:29:0,29,339	0/0:21,0:21:48.12:0,48,512	0/0:7,0:7:13.59:0,14,132	0/1:9,1:9:3.59:4,0,171	0/0:22,0:22:62.52:0,63,648	0/0:20,0:20:35.55:0,36,518	0/0:25,0:25:43.48:0,43,631	0/0:32,0:32:77.47:0,77,819	0/0:23,0:23:54.02:0,54,517
chr10	20733029	.	AT	A	336.99	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.595;DP=480;FS=1.193;HRun=2;HaplotypeScore=49.3531;InbreedingCoeff=0.9288;MQ=79.66;MQ0=0;MQRankSum=-1.502;QD=25.92;ReadPosRankSum=-0.693;VQSLOD=3.1589;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:51.17:0,51,764	0/0:5,0:5:15.05:0,15,225	0/0:13,0:13:36.12:0,36,522	0/0:11,0:11:27.09:0,27,391	0/0:21,0:21:57.18:0,57,834	0/0:20,0:20:60.20:0,60,899	0/0:17,0:17:51.16:0,51,745	0/0:36,0:36:99:0,105,1544	0/0:15,0:15:45.15:0,45,675	0/0:13,0:13:39.12:0,39,550	0/0:14,0:14:30.10:0,30,450	0/0:11,0:11:33.10:0,33,475	0/0:20,0:20:60.18:0,60,860	0/0:16,0:16:48.15:0,48,698	1/1:1,12:13:36.05:432,36,0	0/0:13,0:13:39.13:0,39,581	0/0:25,0:25:72.24:0,72,1078	0/0:13,0:13:36.12:0,36,540	0/0:15,0:15:42.13:0,42,610	0/0:16,0:16:48.16:0,48,719	0/0:20,0:20:57.19:0,57,853	0/0:3,0:3:9.03:0,9,135	0/0:11,0:11:30.10:0,30,449	0/0:19,0:19:54.18:0,54,808	0/0:23,0:23:69.23:0,69,1034	0/0:21,0:21:63.21:0,63,927	0/0:34,0:34:99:0,99,1468	0/0:21,0:21:63.21:0,63,942
chr10	20733064	.	CT	C	181.23	PASS	AB=0.941;AC=3;AF=0.056;AN=54;BaseQRankSum=4.400;DP=404;FS=2.444;HRun=9;HaplotypeScore=46.3690;InbreedingCoeff=0.5993;MQ=70.24;MQ0=1;MQRankSum=-2.942;QD=6.47;ReadPosRankSum=-0.590;VQSLOD=0.1402;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:33.10:0,33,381	0/0:4,0:4:8.80:0,9,58	0/0:16,0:13:28.02:0,28,305	0/0:6,0:6:9.03:0,9,104	0/1:15,1:16:3.87:4,0,161	0/0:18,0:18:54.16:0,54,623	0/0:12,0:12:30.09:0,30,346	0/0:34,0:34:78.22:0,78,893	0/0:11,0:11:27.07:0,27,302	0/0:15,0:15:6.72:0,7,117	0/0:11,0:11:23.32:0,23,146	0/0:8,0:8:24.07:0,24,277	0/0:15,0:15:42.11:0,42,475	0/0:12,0:12:27.08:0,27,311	1/1:2,10:12:30.01:274,30,0	0/0:8,0:8:18.05:0,18,208	0/0:30,0:30:68.98:0,69,765	0/0:13,0:13:33.06:0,33,366	0/0:18,0:18:45.13:0,45,519	0/0:11,0:11:30.09:0,30,346	0/0:11,0:11:27.08:0,27,312	./.	0/0:4,0:4:12.04:0,12,138	0/0:14,0:14:27.08:0,27,312	0/0:22,0:22:54.16:0,54,623	0/0:19,0:19:51.15:0,51,589	0/0:23,0:23:63.19:0,63,727	0/0:25,0:25:75.18:0,75,832
chr10	20733318	.	A	AT	9325.86	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-12.868;DP=549;FS=23.668;HRun=8;HaplotypeScore=52.4542;InbreedingCoeff=0.9755;MQ=67.74;MQ0=10;MQRankSum=-0.217;QD=26.95;ReadPosRankSum=1.048;VQSLOD=3.2209;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,30:37:81.24:935,81,0	0/0:4,0:4:12.01:0,12,110	0/0:20,0:8:15.85:0,16,131	0/0:24,0:14:22.56:0,23,205	0/0:18,0:18:48.02:0,48,439	1/1:0,13:13:24.07:277,24,0	1/1:3,14:17:30.09:346,30,0	1/1:6,24:29:69.20:796,69,0	1/1:2,13:15:39.11:447,39,0	0/0:18,0:18:45.02:0,45,412	0/0:21,0:21:51.03:0,51,467	1/1:3,11:14:33.10:381,33,0	1/1:1,5:6:12.04:138,12,0	1/1:4,16:20:48.14:554,48,0	1/1:0,20:20:44.97:519,45,0	0/0:16,1:16:7.45:0,7,322	0/0:30,0:30:85.29:0,85,772	0/0:22,0:22:60.03:0,60,549	0/0:27,0:26:63.03:0,63,577	1/1:1,15:16:42.12:482,42,0	1/1:3,11:14:33.10:381,33,0	1/1:2,9:11:24.07:277,24,0	1/1:2,10:12:27.08:312,27,0	1/1:5,18:23:63.19:727,63,0	1/1:2,17:18:48.14:554,48,0	1/1:2,23:25:63.17:717,63,0	1/1:1,21:21:41.67:514,42,0	1/1:2,30:32:84.25:969,84,0
chr10	20733813	.	T	TG	19520.12	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-17.059;DP=656;FS=11.375;HRun=0;HaplotypeScore=57.0939;InbreedingCoeff=0.9995;MQ=81.12;MQ0=0;MQRankSum=-2.753;QD=44.06;ReadPosRankSum=2.531;VQSLOD=4.6110;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,28:29:75.25:1176,75,0	0/0:9,0:9:24.08:0,24,336	0/0:20,0:20:60.20:0,60,820	0/0:19,0:19:45.15:0,45,626	0/0:30,0:30:87.26:0,87,1196	1/1:0,29:29:78.27:1247,78,0	1/1:0,18:18:45.15:719,45,0	1/1:1,33:33:99:1539,99,0	1/1:1,20:21:51.17:815,51,0	0/0:23,0:23:69.22:0,69,946	0/0:18,0:18:54.18:0,54,744	1/1:0,27:27:72.25:1151,72,0	1/1:0,19:19:57.19:911,57,0	1/1:0,18:18:51.17:815,51,0	1/1:0,39:39:99:1822,114,0	0/0:28,0:28:84.27:0,84,1160	0/0:22,0:22:66.21:0,66,906	0/0:20,0:20:60.20:0,60,839	0/0:24,0:24:66.19:0,66,886	1/1:0,24:24:63.21:1005,63,0	1/1:0,26:26:75.26:1199,75,0	1/1:0,26:26:75.26:1198,75,0	1/1:0,23:23:66.23:1055,66,0	1/1:0,14:14:42.14:671,42,0	1/1:0,26:26:69.24:1103,69,0	1/1:1,36:37:99:1705,108,0	1/1:0,21:21:60.20:959,60,0	1/1:3,9:12:27.09:431,27,0
chr10	20735960	.	TAAAA	T	3489.95	PASS	AC=32;AF=0.615;AN=52;BaseQRankSum=4.935;DP=373;FS=6.038;HRun=17;HaplotypeScore=74.0565;InbreedingCoeff=0.8564;MQ=49.66;MQ0=9;MQRankSum=-0.319;QD=16.16;ReadPosRankSum=5.119;VQSLOD=0.7147;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,14:19:32.91:400,33,0	0/0:3,0:9:23.90:0,24,271	0/0:10,0:4:1.47:0,1,22	./.	0/0:8,0:17:32.92:0,33,394	1/1:8,7:15:6.62:179,7,0	1/1:3,9:13:20.91:266,21,0	1/1:6,7:10:17.83:216,18,0	1/1:8,4:12:8.68:114,9,0	0/0:12,0:17:32.96:0,33,397	0/0:8,0:15:24.06:0,24,276	1/1:0,11:11:21.07:266,21,0	1/1:0,5:5:12.04:152,12,0	1/1:4,3:5:2.84:38,3,0	0/0:6,0:12:15.04:0,15,251	0/0:6,0:7:14.96:0,15,244	0/0:19,0:22:50.55:0,51,804	0/0:17,0:19:36.03:0,36,600	0/0:7,0:18:40.19:0,40,471	1/1:5,9:14:15.46:209,15,0	./.	1/1:1,3:4:6.01:76,6,0	1/1:3,4:6:8.82:96,9,0	1/1:2,10:12:26.19:341,26,0	1/1:7,11:18:15.93:295,16,0	1/1:11,9:19:20.48:266,20,0	1/1:8,13:19:26.67:342,27,0	1/1:12,7:20:6.20:237,6,0
chr10	20736150	.	TAA	T	3794.79	PASS	AB=0.600;AC=33;AF=0.589;AN=56;BaseQRankSum=1.695;DP=419;FS=2.635;HRun=15;HaplotypeScore=61.4631;InbreedingCoeff=0.8887;MQ=65.28;MQ0=2;MQRankSum=1.047;QD=16.50;ReadPosRankSum=3.107;VQSLOD=3.0265;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,19:26:44.10:411,44,0	0/0:6,0:6:18.03:0,18,212	0/0:19,0:12:17.49:0,17,162	0/0:13,0:12:8.55:0,9,59	0/0:17,0:20:38.57:0,39,465	1/1:2,13:17:32.43:261,32,0	1/1:2,8:10:23.98:211,24,0	1/1:9,15:25:44.56:381,45,0	0/1:3,6:9:3.36:138,0,3	0/0:20,0:22:41.04:0,41,468	0/0:18,0:21:41:0,41,419	1/1:1,11:12:32.99:291,33,0	1/1:1,2:5:2.58:56,3,0	1/1:2,8:10:20.47:170,20,0	0/0:3,0:13:22.46:0,22,78	0/0:7,0:10:26.52:0,27,273	0/0:19,0:22:50.12:0,50,610	0/0:16,0:17:41.25:0,41,392	0/0:23,0:25:51.13:0,51,646	1/1:2,5:8:11.66:91,12,0	1/1:4,6:12:29.35:224,29,0	1/1:1,2:4:5.72:38,6,0	1/1:3,10:13:23.88:210,24,0	1/1:3,10:14:23.73:197,24,0	1/1:2,12:14:20.94:185,21,0	1/1:4,14:17:41.94:365,42,0	1/1:3,16:20:35.68:302,36,0	1/1:1,10:11:29.94:264,30,0
chr10	20736303	.	T	TA	6971.25	PASS	AB=0.924;AC=41;AF=0.732;AN=56;BaseQRankSum=-4.248;DP=420;FS=0.481;HRun=9;HaplotypeScore=59.6129;InbreedingCoeff=0.3199;MQ=66.78;MQ0=2;MQRankSum=-3.032;QD=19.86;ReadPosRankSum=0.207;VQSLOD=5.0241;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,28:32:75.04:811,75,0	0/1:5,0:5:12.30:29,0,12	0/1:15,0:11:14.38:14,0,70	0/0:10,0:6:6.98:0,7,44	0/1:19,0:18:48.66:49,0,96	1/1:2,7:9:21.06:232,21,0	1/1:1,9:10:24.06:265,24,0	1/1:4,17:22:27.89:500,28,0	1/1:2,16:18:25.07:493,25,0	0/1:14,0:15:24.06:60,0,24	1/1:16,0:15:3.77:82,4,0	0/1:2,14:16:6.99:386,0,7	1/1:1,8:9:21.06:232,21,0	1/1:1,8:9:27.07:297,27,0	0/1:9,0:9:12.33:29,0,12	0/0:14,1:15:8.81:0,9,299	0/0:25,0:25:68.98:0,69,599	0/0:19,0:19:18.13:0,18,307	0/1:16,0:16:41.24:41,0,96	1/1:1,10:12:29.91:313,30,0	1/1:1,15:16:39.11:431,39,0	1/1:0,4:4:9.02:100,9,0	1/1:2,14:16:33.09:362,33,0	1/1:2,9:11:27.07:298,27,0	1/1:2,14:16:16.10:405,16,0	1/1:2,12:13:36.10:398,36,0	1/1:3,30:33:81.02:876,81,0	1/1:0,8:8:24.06:265,24,0
chr10	20736307	.	A	AAAAAAC	4623.11	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-8.383;DP=437;FS=1.828;HRun=0;HaplotypeScore=112.0784;InbreedingCoeff=0.9625;MQ=68.75;MQ0=2;MQRankSum=-8.226;QD=49.18;ReadPosRankSum=-2.427;VQSLOD=4.6094;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:70.96:0,71,588	1/1:1,4:5:12.04:389,12,0	0/0:15,0:11:14.85:0,15,158	0/0:14,0:9:11.65:0,12,107	1/1:4,15:18:33.07:908,33,0	0/0:9,0:9:20.97:0,21,179	0/0:10,0:10:23.96:0,24,202	0/0:21,0:21:29.43:0,29,288	0/0:18,0:18:47.96:0,48,453	1/1:5,9:17:39.97:973,40,0	1/1:4,13:19:36.03:1024,36,0	0/0:17,0:17:44.96:0,45,416	0/0:10,0:10:23.93:0,24,195	0/0:9,0:9:26.97:0,27,229	1/1:3,7:13:12.04:389,12,0	0/0:17,0:17:36.11:0,36,721	0/0:25,0:25:60.21:0,60,1233	0/0:21,0:21:29.42:0,29,651	1/1:9,8:20:33.10:941,33,0	0/0:12,0:12:29.01:0,29,234	0/0:15,0:15:32.93:0,33,279	0/0:4,0:4:8.99:0,9,76	0/0:15,0:15:29.97:0,30,253	0/0:11,0:11:26.96:0,27,226	0/0:15,0:15:38.96:0,39,365	0/0:14,0:14:35.97:0,36,306	0/0:33,0:32:70.63:0,71,584	0/0:8,0:8:23.97:0,24,203
chr10	20736612	.	AAG	A	2375.60	PASS	AB=0.878;AC=31;AF=0.554;AN=56;BaseQRankSum=5.988;DP=377;FS=15.276;HRun=0;HaplotypeScore=66.0823;InbreedingCoeff=0.6490;MQ=72.14;MQ0=2;MQRankSum=-1.578;QD=12.25;ReadPosRankSum=-3.084;VQSLOD=1.4754;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,1:19:31.86:304,32,0	0/0:4,0:4:12.04:0,12,194	0/0:30,0:21:33.57:0,34,485	0/0:22,0:12:18.67:0,19,244	0/0:15,0:14:22.07:0,22,492	1/1:9,1:10:17.52:128,18,0	1/1:12,2:14:0.53:167,1,0	1/1:26,3:29:64.70:532,65,0	1/1:5,1:6:16:125,16,0	0/0:16,0:16:42.09:0,42,593	0/0:9,0:9:27.09:0,27,435	1/1:10,0:10:17.44:115,17,0	1/1:12,0:12:19.41:92,19,0	1/1:10,0:10:11.81:87,12,0	1/1:13,0:13:27:241,27,0	0/0:12,0:12:36.10:0,36,535	0/0:30,0:30:80.94:0,81,1104	0/0:25,0:25:66.03:0,66,923	0/0:20,0:20:57.17:0,57,849	1/1:12,0:11:4.39:132,4,0	0/1:4,1:5:5.08:49,0,5	0/1:1,1:2:10.62:14,0,11	0/1:5,0:5:4.16:34,0,4	1/1:3,0:3:5.68:28,6,0	0/1:8,0:8:3.14:80,0,3	1/1:12,0:11:21.41:133,21,0	1/1:15,0:15:26.35:257,26,0	0/1:7,1:8:2.27:60,0,2
chr10	20736613	.	AG	A	4452.43	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=4.269;DP=374;FS=22.709;HRun=1;HaplotypeScore=53.3601;InbreedingCoeff=0.9135;MQ=72.38;MQ0=2;MQRankSum=-0.897;QD=23.07;ReadPosRankSum=-3.976;VQSLOD=2.7380;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:17,4:20:55.01:525,55,0	0/0:5,0:5:15.02:0,15,172	0/0:28,1:21:24.02:0,24,328	0/0:19,0:12:16.04:0,16,189	0/0:15,0:14:22.05:0,22,376	1/1:2,8:10:17.96:183,18,0	1/1:4,9:13:22.79:241,23,0	1/1:14,16:30:84.60:965,85,0	1/1:5,1:6:17.94:158,18,0	0/0:14,0:14:41.93:0,42,455	0/0:9,0:9:27.08:0,27,333	1/1:3,7:10:17.94:195,18,0	1/1:1,11:12:24.06:311,24,0	1/1:1,9:10:11.98:115,12,0	1/1:13,0:13:26.78:192,27,0	0/0:12,0:12:32.16:0,32,381	0/0:30,0:30:62.78:0,63,781	0/0:25,0:25:57.05:0,57,669	0/0:21,0:21:59.31:0,59,673	1/1:3,9:11:27.89:286,28,0	1/1:2,3:5:6.47:66,6,0	1/1:2,0:2:3.44:21,3,0	1/1:4,1:5:9.48:97,9,0	1/1:0,3:3:6.02:84,6,0	1/1:2,5:7:11.22:174,11,0	1/1:2,9:10:28.80:304,29,0	1/1:10,5:15:40.70:426,41,0	1/1:2,6:8:10.57:111,11,0
chr10	20738123	.	AG	A	21456.66	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=10.183;DP=700;FS=10.712;HRun=2;HaplotypeScore=86.5860;InbreedingCoeff=0.9581;MQ=82.61;MQ0=0;MQRankSum=-3.397;QD=36.37;ReadPosRankSum=3.317;VQSLOD=4.8276;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,44:44:99:1675,129,0	1/1:0,8:8:24.08:312,24,0	0/0:21,0:21:63.20:0,63,924	0/0:17,1:18:3.12:0,3,394	1/1:1,30:31:93.29:1194,93,0	1/1:0,23:23:66.21:857,66,0	1/1:0,35:35:96.31:1247,96,0	1/1:0,29:29:87.27:1115,87,0	1/1:0,25:25:75.24:974,75,0	1/1:0,27:27:81.24:1035,81,0	1/1:1,16:17:45.13:584,45,0	1/1:0,33:33:90.29:1169,90,0	1/1:0,28:28:78.25:1013,78,0	1/1:2,26:28:72.23:935,72,0	1/1:1,24:25:60.19:779,60,0	0/0:22,0:22:63.18:0,63,882	0/0:30,0:30:90.28:0,90,1326	0/0:19,0:19:57.15:0,57,829	1/1:0,22:22:60.19:779,60,0	1/1:0,18:18:51.17:662,51,0	1/1:1,56:57:99:2104,163,0	1/1:1,22:23:60.20:779,60,0	1/1:0,21:21:60.20:779,60,0	1/1:0,35:35:93.30:1208,93,0	1/1:1,22:23:66.21:857,66,0	1/1:1,15:16:45.15:582,45,0	1/1:1,13:14:39.13:506,39,0	1/1:0,8:8:24.08:312,24,0
chr10	20739276	.	G	GA	399.72	PASS	AB=0.941;AC=3;AF=0.054;AN=56;BaseQRankSum=-1.828;DP=635;FS=12.652;HRun=10;HaplotypeScore=68.5487;InbreedingCoeff=0.6960;MQ=71.97;MQ0=2;MQRankSum=-0.737;QD=11.10;ReadPosRankSum=0.147;VQSLOD=1.3549;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:38:94.90:0,95,769	0/0:25,0:25:71.89:0,72,587	0/0:28,0:22:19.03:0,19,245	0/0:12,0:12:7.63:0,8,105	0/0:22,0:22:44.91:0,45,368	0/0:25,0:25:62.87:0,63,512	0/0:18,0:18:38.90:0,39,314	0/0:25,0:25:50.91:0,51,418	0/0:25,3:29:32.73:0,33,466	0/0:33,0:33:77.87:0,78,637	0/0:11,0:13:16.97:0,17,129	0/0:22,0:22:47.90:0,48,393	0/0:21,0:23:60.04:0,60,461	0/0:22,0:23:46.96:0,47,375	1/1:3,16:20:47.95:494,48,0	0/0:17,0:17:41.92:0,42,345	0/0:20,0:20:50.88:0,51,411	0/0:20,0:19:53.89:0,54,437	0/0:24,0:24:50.91:0,51,414	0/0:34,0:34:89.61:0,90,715	0/0:16,0:16:38.94:0,39,320	0/1:15,1:16:2.11:2,0,192	0/0:13,0:13:38.93:0,39,317	0/0:22,0:22:57.36:0,57,461	0/0:20,0:20:47.90:0,48,390	0/0:30,1:31:39.89:0,40,531	0/0:20,1:21:18.98:0,19,362	0/0:22,0:22:59.90:0,60,493
chr10	20742101	.	TCCCTCC	T	3434.61	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=10.566;DP=581;FS=8.259;HRun=0;HaplotypeScore=121.9984;InbreedingCoeff=0.9848;MQ=71.55;MQ0=4;MQRankSum=-10.288;QD=33.03;ReadPosRankSum=1.577;VQSLOD=2.6106;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:69.15:0,69,2159	1/1:3,6:8:15.05:298,15,0	0/0:25,0:17:23.25:0,23,480	0/0:21,0:17:20.43:0,20,402	1/1:3,13:16:23.95:396,24,0	0/0:26,0:26:66.23:0,66,2139	0/0:15,0:15:36.12:0,36,1211	0/0:24,0:24:42.13:0,42,1093	0/0:31,0:31:81.27:0,81,2496	1/1:8,16:23:48.03:982,48,0	1/1:5,6:11:18.06:378,18,0	0/0:30,0:30:78.24:0,78,2305	0/0:19,0:19:51.13:0,51,1600	0/0:25,0:25:60.21:0,60,1749	1/1:10,22:30:48.16:1031,48,0	0/0:22,0:22:48.16:0,48,1516	0/0:23,0:23:54.19:0,54,1720	0/0:27,0:27:78.22:0,78,2406	1/1:5,7:12:18.05:349,18,0	0/0:12,0:12:30.10:0,30,983	0/0:28,0:28:69.22:0,69,2092	0/0:10,0:10:15.05:0,15,451	0/0:18,0:18:42.14:0,42,1353	0/0:41,0:41:93.32:0,93,2888	0/0:12,0:12:33.11:0,33,1047	0/0:14,0:14:27.09:0,27,906	0/0:18,0:18:48.16:0,48,1574	0/0:6,0:6:15.05:0,15,504
chr10	20743761	.	CGAGAGA	C	1874.76	PASS	AB=0.791;AC=11;AF=0.196;AN=56;BaseQRankSum=2.354;DP=501;FS=0.000;HRun=0;HaplotypeScore=149.4027;InbreedingCoeff=0.4552;MQ=79.60;MQ0=5;MQRankSum=-0.740;QD=15.49;ReadPosRankSum=2.001;VQSLOD=3.1932;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:5.01:0,5,37	1/1:7,3:11:26.85:376,27,0	0/0:39,0:26:17.76:0,18,400	0/0:47,0:29:38.50:0,38,526	1/1:26,2:28:29.98:419,30,0	0/0:14,0:14:5.63:0,6,50	0/0:11,0:11:1.84:0,2,23	0/0:13,0:13:12.03:0,12,83	0/0:9,0:9:5.69:0,6,70	0/1:14,11:26:99:666,0,121	1/1:22,2:25:6.69:258,7,0	0/0:17,0:17:10.86:0,11,139	0/0:15,0:14:5.87:0,6,26	0/0:13,0:13:8.16:0,8,80	0/1:6,0:11:5.83:45,0,6	0/0:18,0:22:41.51:0,42,993	0/0:12,0:15:39.10:0,39,849	0/0:17,0:17:30.09:0,30,878	1/1:4,6:10:17.14:264,17,0	0/0:19,0:19:10.85:0,11,102	0/0:8,0:8:5.96:0,6,48	0/0:18,0:18:12.01:0,12,148	0/0:14,0:14:3:0,3,25	0/0:19,0:19:6.07:0,6,70	0/0:12,0:12:5.09:0,5,90	0/0:20,0:20:6.76:0,7,69	0/1:10,0:10:1.75:2,0,43	0/0:9,0:9:5.90:0,6,40
chr10	20743786	.	GAAAGAGGA	G	6675.23	PASS	AB=0.985;AC=36;AF=0.692;AN=52;BaseQRankSum=-2.247;DP=514;FS=29.933;HRun=0;HaplotypeScore=169.1578;InbreedingCoeff=0.3971;MQ=52.61;MQ0=14;MQRankSum=-2.336;QD=20.11;ReadPosRankSum=0.733;VQSLOD=2.4706;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:25:32.80:697,33,0	0/1:15,0:15:99:225,0,130	0/0:26,0:9:7.95:0,8,263	0/0:58,0:18:23.34:0,23,327	0/1:26,0:25:99:230,0,266	1/1:14,0:15:30.03:553,30,0	1/1:6,1:6:6.02:126,6,0	1/1:10,0:9:13.58:423,14,0	1/1:10,0:12:14.96:303,15,0	0/1:28,0:28:99:99,0,352	0/1:21,0:21:68.53:69,0,242	1/1:10,0:12:21.06:332,21,0	1/1:12,0:12:15.05:251,15,0	1/1:18,0:17:18.51:319,19,0	1/1:13,0:13:28.67:438,29,0	0/0:20,0:20:45.61:0,46,1051	0/0:25,0:25:75.22:0,75,1713	0/0:19,0:19:50.54:0,51,1583	0/1:17,0:16:75.18:75,0,320	1/1:15,0:16:21.07:417,21,0	1/1:8,0:8:3.26:108,3,0	./.	./.	1/1:19,0:20:14.62:283,15,0	1/1:13,0:14:22.47:471,22,0	1/1:15,0:14:36.11:661,36,0	1/1:13,0:15:34.31:574,34,0	0/1:9,0:9:14.66:20,0,15
chr10	20743790	.	GAGGA	G	5040.01	PASS	AB=0.905;AC=37;AF=0.712;AN=52;BaseQRankSum=4.687;DP=507;FS=27.189;HRun=0;HaplotypeScore=148.6086;InbreedingCoeff=0.4955;MQ=49.50;MQ0=17;MQRankSum=-2.739;QD=15.27;ReadPosRankSum=0.714;VQSLOD=2.3137;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:24:33.35:441,33,0	1/1:15,0:15:3.26:257,3,0	0/0:25,0:7:11.91:0,12,148	0/0:58,0:12:18.63:0,19,225	0/1:24,3:26:99:177,0,184	1/1:14,1:15:29.74:350,30,0	1/1:7,1:6:6.02:82,6,0	1/1:12,0:10:21:288,21,0	1/1:11,0:11:14.69:184,15,0	0/1:25,3:28:6.31:415,0,6	0/1:13,8:21:69.03:69,0,79	1/1:9,1:10:18.05:213,18,0	1/1:12,1:12:15.04:169,15,0	1/1:17,0:16:13.74:169,14,0	1/1:14,0:14:31.78:427,32,0	0/0:19,0:19:41.15:0,41,695	0/0:25,0:25:75.17:0,75,1421	0/0:19,0:19:39.78:0,40,1191	0/1:15,0:14:95.76:96,0,141	1/1:15,1:15:21.07:270,21,0	1/1:9,0:9:5.31:61,5,0	./.	./.	1/1:20,0:20:15.03:208,15,0	1/1:13,0:13:20.81:292,21,0	1/1:15,0:14:33.11:428,33,0	1/1:15,1:16:33.88:400,34,0	0/1:10,0:9:2.48:43,0,2
chr10	20743792	.	GGA	G	5147.73	PASS	AB=0.885;AC=36;AF=0.692;AN=52;BaseQRankSum=4.694;DP=503;FS=19.433;HRun=0;HaplotypeScore=137.2179;InbreedingCoeff=0.4639;MQ=49.50;MQ0=18;MQRankSum=-3.129;QD=15.89;ReadPosRankSum=-0.020;VQSLOD=3.2534;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,10:23:33:463,33,0	0/1:9,1:15:3.18:259,0,3	0/0:25,0:7:11.97:0,12,153	0/0:61,0:12:17.32:0,17,216	0/1:23,1:27:99:243,0,106	1/1:8,7:15:29.96:390,30,0	1/1:4,4:6:6.02:82,6,0	1/1:5,6:9:21.03:290,21,0	1/1:3,8:11:15.05:211,15,0	0/1:20,3:28:53.32:404,0,53	0/1:15,1:19:76.05:76,0,78	1/1:2,9:11:18.05:213,18,0	1/1:2,10:12:15.05:178,15,0	1/1:4,12:15:15.30:187,15,0	1/1:9,5:14:31.34:376,31,0	0/0:18,0:18:39.95:0,40,576	0/0:25,0:25:74.85:0,75,1150	0/0:19,0:19:21.51:0,22,920	0/1:12,0:14:70.67:71,0,166	1/1:5,11:15:21.07:270,21,0	1/1:5,3:8:5.53:63,6,0	./.	./.	1/1:15,5:20:15.04:209,15,0	1/1:6,7:13:20.65:292,21,0	1/1:2,12:13:33.11:431,33,0	1/1:6,10:16:33.82:420,34,0	0/1:2,8:9:0.68:22,0,1
chr10	20743820	.	GAC	G	1339.86	PASS	AB=0.965;AC=33;AF=0.611;AN=54;BaseQRankSum=4.832;DP=529;FS=0.501;HRun=0;HaplotypeScore=144.8316;InbreedingCoeff=0.5115;MQ=42.47;MQ0=11;MQRankSum=-3.503;QD=3.85;ReadPosRankSum=-2.967;VQSLOD=1.9826;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:25:7.46:47,7,0	0/0:15,0:15:12.96:0,13,199	0/0:22,0:7:4.04:0,4,91	0/1:51,0:9:0.12:0,0,68	0/0:23,0:23:38.76:0,39,386	0/0:19,0:19:2.64:0,3,9	1/1:9,0:8:2.94:18,3,0	1/1:27,0:26:35.23:307,35,0	1/1:15,1:16:26.85:209,27,0	0/1:35,0:35:4.47:4,0,619	0/0:23,0:23:26.55:0,27,213	1/1:9,0:9:8.98:72,9,0	1/1:12,0:12:25.76:172,26,0	1/1:15,4:18:1.66:15,2,0	0/1:11,3:14:18.90:104,0,19	0/1:16,0:16:12.05:12,0,371	0/0:26,0:26:18.56:0,19,843	0/0:22,0:22:49.06:0,49,832	0/0:15,0:14:21.40:0,21,227	1/1:19,0:19:5.91:38,6,0	0/1:12,0:12:0:0,0,0	1/1:7,0:6:2.99:24,3,0	1/1:15,0:15:3.73:15,4,0	1/1:18,0:18:2.79:19,3,0	./.	1/1:19,0:18:37.84:257,38,0	1/1:16,0:16:9.98:95,10,0	1/1:8,0:8:16.98:109,17,0
chr10	20743825	.	AGAC	A	1318.37	PASS	AB=0.760;AC=22;AF=0.393;AN=56;BaseQRankSum=2.595;DP=533;FS=1.006;HRun=0;HaplotypeScore=146.7764;InbreedingCoeff=0.1024;MQ=43.64;MQ0=10;MQRankSum=-3.934;QD=4.94;ReadPosRankSum=-3.478;VQSLOD=1.7482;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:16,10:25:2.75:64,0,3	0/0:13,0:13:36.07:0,36,697	0/0:24,0:7:21.06:0,21,393	0/0:49,0:12:27.55:0,28,434	0/0:24,0:24:45.59:0,46,956	0/1:14,6:20:26.38:26,0,44	1/1:8,3:10:2.80:13,3,0	0/1:17,11:28:99:260,0,163	0/1:11,5:16:8.73:172,0,9	0/0:34,0:34:87.19:0,87,1811	0/0:21,0:21:27.05:0,27,611	0/1:7,1:8:7.45:57,0,7	0/1:8,4:12:9.51:91,0,10	0/1:12,7:18:9.68:82,0,10	1/1:10,4:14:18.88:166,19,0	0/0:18,0:18:43.39:0,43,895	0/0:25,0:25:69.24:0,69,1600	0/0:24,0:24:59.29:0,59,1377	0/0:15,0:14:36.03:0,36,684	0/1:13,7:20:1.24:63,0,1	1/1:9,3:12:8.90:60,9,0	1/1:4,3:6:3.48:35,3,0	0/1:8,7:15:11.15:11,0,22	0/0:18,1:19:2.82:0,3,22	1/1:10,6:15:3.46:36,3,0	0/1:11,8:18:63.24:192,0,63	0/1:11,5:16:34.51:52,0,35	0/1:7,1:8:13.74:107,0,14
chr10	20743828	.	C	CAA	4694.64	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=3.498;DP=521;FS=6.174;HRun=1;HaplotypeScore=122.1940;InbreedingCoeff=0.9421;MQ=46.36;MQ0=8;MQRankSum=-4.525;QD=17.92;ReadPosRankSum=-5.760;VQSLOD=0.0692;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,11:26:26.88:274,27,0	0/0:13,0:13:30.62:0,31,313	0/0:21,0:7:20.94:0,21,286	0/0:42,0:14:32.85:0,33,425	0/0:24,0:24:39.64:0,40,502	1/1:9,10:19:17.06:106,17,0	1/1:3,6:9:8.94:77,9,0	1/1:17,11:28:10.91:777,11,0	1/1:15,0:15:19.81:451,20,0	0/0:33,0:33:85.86:0,86,1095	0/0:22,0:22:29.66:0,30,364	1/1:6,0:6:14.94:188,15,0	1/1:13,0:13:26.80:358,27,0	1/1:18,1:18:19.46:244,19,0	1/1:7,4:13:29.89:381,30,0	0/0:18,0:18:42.12:0,42,598	0/0:25,0:25:69.23:0,69,1046	0/0:23,0:24:51.51:0,52,873	0/0:14,0:13:34.39:0,34,414	1/1:9,11:20:41.66:321,42,0	1/1:4,11:15:14.84:100,15,0	1/1:6,0:6:11.93:113,12,0	1/1:15,1:16:33.23:270,33,0	0/0:3,16:21:0.47:0,0,1	1/1:9,7:16:14.77:96,15,0	1/1:11,7:17:27.69:525,28,0	1/1:6,6:13:18.02:218,18,0	1/1:7,0:8:17.40:197,17,0
chr10	20744375	.	TAAA	T	290.43	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.016;DP=547;FS=0.000;HRun=6;HaplotypeScore=73.6286;InbreedingCoeff=0.9930;MQ=75.04;MQ0=0;MQRankSum=-0.322;QD=32.27;ReadPosRankSum=1.712;VQSLOD=1.4430;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:72.24:0,72,1563	0/0:13,0:13:36.11:0,36,735	0/0:18,0:18:48.16:0,48,1035	0/0:8,0:8:23.51:0,24,400	0/0:40,0:40:99:0,120,2555	0/0:20,0:20:60.20:0,60,1293	0/0:16,0:16:48.16:0,48,1036	0/0:30,0:30:90.30:0,90,1912	0/0:15,0:15:42.13:0,42,868	0/0:16,0:16:48.16:0,48,1001	0/0:21,0:21:63.08:0,63,1371	0/0:21,0:21:60.19:0,60,1317	0/0:18,0:18:54.19:0,54,1222	0/0:18,0:18:54.19:0,54,1224	1/1:0,9:9:24.08:384,24,0	0/0:16,0:16:48.16:0,48,1074	0/0:13,0:13:36.11:0,36,719	0/0:21,0:21:63.20:0,63,1302	0/0:28,0:28:81.28:0,81,1799	0/0:16,0:16:45.15:0,45,1016	0/0:8,0:8:24.08:0,24,544	0/0:14,0:14:39.13:0,39,867	0/0:18,0:18:51.17:0,51,1129	0/0:13,0:13:33.11:0,33,747	0/0:20,0:20:60.21:0,60,1334	0/0:33,0:33:96.32:0,96,1993	0/0:35,0:35:99:0,105,2253	0/0:24,0:24:69.24:0,69,1531
chr10	20745156	.	G	GGT	803.82	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-5.449;DP=460;FS=6.690;HRun=0;HaplotypeScore=58.3193;InbreedingCoeff=0.8272;MQ=81.49;MQ0=0;MQRankSum=-1.166;QD=44.66;ReadPosRankSum=1.926;VQSLOD=5.2150;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:66.20:0,66,929	0/0:5,0:5:11.60:0,12,120	0/0:14,0:14:32.91:0,33,433	0/0:12,0:12:24.71:0,25,363	0/0:7,0:7:21.07:0,21,309	0/0:18,0:18:54.18:0,54,790	0/0:28,0:28:84.28:0,84,1235	0/0:14,0:14:39.13:0,39,573	0/0:8,0:8:24.08:0,24,352	0/0:15,0:15:39.12:0,39,538	0/0:4,0:4:8.93:0,9,132	0/0:16,0:16:48.16:0,48,707	0/0:13,0:13:39.11:0,39,554	0/0:15,0:15:42.14:0,42,618	1/1:0,17:18:48.16:899,48,0	0/0:11,0:11:33.11:0,33,486	0/0:51,0:51:99:0,150,2146	0/0:37,0:37:99:0,105,1493	0/0:25,0:25:72.23:0,72,1029	0/0:4,0:4:12.04:0,12,175	0/0:25,0:25:66.15:0,66,951	0/0:5,0:5:9.03:0,9,132	0/0:7,0:7:15.05:0,15,221	0/0:31,0:31:93.28:0,93,1313	0/0:11,0:11:33.10:0,33,462	0/0:16,0:16:48.16:0,48,706	0/0:16,0:16:48.16:0,48,704	0/0:10,0:10:30.10:0,30,442
chr10	20746217	.	A	AAAAC	5044.35	PASS	AB=1.000;AC=29;AF=0.558;AN=52;BaseQRankSum=11.534;DP=444;FS=106.230;HRun=0;HaplotypeScore=179.8796;InbreedingCoeff=-0.0752;MQ=46.00;MQ0=6;MQRankSum=-11.244;QD=14.97;ReadPosRankSum=-1.222;VQSLOD=1.1907;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:25:0.77:315,1,0	./.	0/0:12,0:6:14.37:0,14,148	0/0:13,0:5:8.60:0,9,87	0/1:21,0:18:22.40:178,0,22	0/1:18,0:18:63.42:63,0,99	0/1:11,0:10:29.50:164,0,30	0/1:25,0:21:72.50:192,0,73	0/1:9,0:9:17.88:128,0,18	0/1:12,0:12:15.69:159,0,16	1/1:11,0:9:14.87:192,15,0	0/1:17,0:15:11.93:208,0,12	0/1:8,0:8:28.28:95,0,28	0/1:16,0:14:2.92:204,0,3	1/1:13,11:18:47.72:938,48,0	0/0:25,0:25:72.21:0,72,1150	0/0:29,0:28:80.90:0,81,1154	0/0:25,0:26:71.91:0,72,1188	0/1:19,0:17:10.63:293,0,11	1/1:15,0:15:0.22:269,0,0	./.	0/1:10,0:9:5.43:178,0,5	1/1:16,0:16:36.91:400,37,0	1/1:5,0:5:3.49:38,3,0	0/1:14,0:14:5.74:274,0,6	1/1:22,0:21:5.45:407,5,0	0/1:24,0:21:18.22:189,0,18	1/1:15,0:15:6.97:161,7,0
chr10	20746237	.	C	CA	440.54	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=3.796;DP=457;FS=8.241;HRun=7;HaplotypeScore=89.5075;InbreedingCoeff=0.4162;MQ=52.41;MQ0=2;MQRankSum=-2.870;QD=11.59;ReadPosRankSum=1.105;VQSLOD=2.0833;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:41.82:0,42,427	0/0:2,0:2:3:0,3,29	0/0:10,0:8:11.65:0,12,101	0/1:13,0:6:18.89:19,0,74	0/0:26,0:23:35.89:0,36,347	0/0:13,0:13:13.63:0,14,136	0/0:13,0:12:29.72:0,30,270	0/0:31,0:27:63.01:0,63,595	0/0:10,0:10:12.01:0,12,116	0/0:15,0:15:39.06:0,39,376	0/0:12,0:11:30.02:0,30,282	0/0:21,0:19:35.21:0,35,339	0/0:9,0:9:15.45:0,15,144	0/0:17,0:15:35.89:0,36,347	1/1:9,16:19:24.86:525,25,0	0/0:21,0:21:60.07:0,60,572	0/0:28,0:27:72.11:0,72,694	0/0:26,0:26:60.97:0,61,581	0/0:21,0:21:18.61:0,19,294	0/0:15,0:15:33.04:0,33,314	0/0:2,0:1:3:0,3,29	0/0:9,0:8:24.03:0,24,230	0/0:16,1:17:8.96:0,9,348	0/0:5,0:5:2.80:0,3,28	0/0:16,0:16:36.05:0,36,346	0/0:24,0:24:56.99:0,57,546	0/0:21,0:18:23.82:0,24,215	0/0:13,0:13:26.99:0,27,257
chr10	20746595	.	AAAAG	A	7292.15	PASS	AB=0.885;AC=40;AF=0.714;AN=56;BaseQRankSum=6.656;DP=444;FS=25.253;HRun=0;HaplotypeScore=94.5446;InbreedingCoeff=0.5596;MQ=54.95;MQ0=4;MQRankSum=-2.069;QD=20.72;ReadPosRankSum=-0.292;VQSLOD=2.8233;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:14,7:19:43.69:500,44,0	0/1:9,0:9:4.71:39,0,5	0/0:9,0:8:20.94:0,21,301	0/0:4,0:1:2.68:0,3,11	1/1:21,0:21:0.28:33,0,0	1/1:15,7:22:47.46:670,47,0	1/1:0,14:14:12.04:227,12,0	1/1:4,30:34:86.84:1086,87,0	1/1:0,14:14:27.09:505,27,0	0/1:13,0:13:6.50:19,0,7	0/1:24,0:24:61.96:82,0,62	1/1:0,11:11:18.53:337,19,0	1/1:2,7:8:8.67:167,9,0	1/1:2,11:12:18.06:320,18,0	1/1:0,21:20:27.09:486,27,0	0/0:11,0:11:30.08:0,30,619	0/0:27,0:27:75.17:0,75,1494	0/0:19,0:18:54.17:0,54,1261	0/0:22,0:21:4.57:0,5,69	1/1:3,15:18:23.10:349,23,0	1/1:1,14:15:9.03:146,9,0	1/1:2,8:10:21.54:332,22,0	1/1:2,16:16:21.04:338,21,0	1/1:3,12:14:33.11:599,33,0	0/1:2,12:14:10.92:207,0,11	1/1:2,8:10:14.29:249,14,0	1/1:0,10:10:18.06:341,18,0	1/1:1,15:16:18.01:260,18,0
chr10	20746597	.	AAG	A	6126.49	PASS	AB=1.000;AC=45;AF=0.804;AN=56;BaseQRankSum=8.794;DP=437;FS=22.428;HRun=0;HaplotypeScore=85.3556;InbreedingCoeff=0.7960;MQ=55.18;MQ0=3;MQRankSum=-3.650;QD=16.69;ReadPosRankSum=-0.521;VQSLOD=2.7985;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:18:42.90:294,43,0	1/1:1,8:9:23.81:270,24,0	0/0:10,0:9:23.96:0,24,287	0/0:4,0:1:3:0,3,29	1/1:13,8:21:43.35:492,43,0	1/1:19,0:19:44.90:377,45,0	1/1:14,0:14:12:105,12,0	1/1:33,0:33:69.13:504,69,0	1/1:14,0:14:26.97:231,27,0	1/1:6,10:16:45.11:608,45,0	1/1:15,9:24:67.45:731,67,0	1/1:11,0:11:17.96:153,18,0	1/1:9,0:8:8.99:77,9,0	1/1:12,0:11:17.03:138,17,0	1/1:21,0:20:26.34:213,26,0	0/0:12,0:12:33.08:0,33,469	0/0:25,0:25:75.23:0,75,1125	0/0:19,0:18:54.16:0,54,845	1/1:9,12:21:60.10:639,60,0	1/1:16,0:16:17.58:131,18,0	1/1:14,0:14:8.57:56,9,0	1/1:10,0:10:21.97:152,22,0	1/1:18,0:16:19.68:154,20,0	1/1:15,0:14:32.95:283,33,0	0/1:14,0:14:18.85:85,0,19	1/1:9,1:10:20.47:171,20,0	1/1:10,0:10:18:158,18,0	1/1:16,0:16:9.55:107,10,0
chr10	20746598	.	AG	A	4807.54	PASS	AB=1.000;AC=44;AF=0.786;AN=56;BaseQRankSum=9.029;DP=430;FS=10.116;HRun=1;HaplotypeScore=83.1153;InbreedingCoeff=0.7331;MQ=56.75;MQ0=3;MQRankSum=-5.226;QD=13.39;ReadPosRankSum=1.008;VQSLOD=2.9772;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,1:18:19.64:224,20,0	1/1:8,1:9:23.92:204,24,0	0/0:11,0:10:23.95:0,24,263	0/0:4,0:1:2.90:0,3,16	1/1:21,0:21:43.65:367,44,0	1/1:18,0:18:45.94:342,46,0	1/1:14,0:14:11.87:81,12,0	1/1:32,0:32:61.29:466,61,0	1/1:14,0:14:26.61:177,27,0	1/1:16,0:16:44.94:377,45,0	1/1:20,4:24:71.55:573,72,0	1/1:11,0:11:17.72:117,18,0	1/1:8,0:7:8.75:61,9,0	1/1:12,0:11:17.78:120,18,0	1/1:21,0:20:26.61:177,27,0	0/0:12,0:12:33.07:0,33,384	0/0:25,0:25:75.21:0,75,930	0/0:19,0:18:54.15:0,54,667	1/1:19,2:21:60.57:500,61,0	1/1:15,0:15:15.20:112,15,0	1/1:14,0:14:8.81:55,9,0	1/1:10,0:10:23.24:135,23,0	1/1:16,0:16:16.88:119,17,0	1/1:14,0:13:32.47:217,32,0	0/1:13,0:13:23.08:61,0,23	1/1:10,0:10:20.07:121,20,0	1/1:10,0:10:17.80:122,18,0	0/1:16,0:16:4.11:79,0,4
chr10	20747040	.	G	GT	22208.79	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-10.242;DP=787;FS=10.684;HRun=0;HaplotypeScore=99.1558;InbreedingCoeff=0.9997;MQ=82.30;MQ0=0;MQRankSum=-5.905;QD=41.75;ReadPosRankSum=3.789;VQSLOD=4.4741;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,47:48:99:1868,117,0	0/0:16,0:16:48.16:0,48,671	0/0:25,0:25:75.22:0,75,1000	0/0:27,0:27:75.25:0,75,1034	0/0:33,0:33:96.32:0,96,1341	1/1:1,27:28:75.26:1198,75,0	1/1:0,26:26:66.23:1055,66,0	1/1:1,30:31:93.27:1448,93,0	1/1:3,31:34:87.29:1389,87,0	0/0:38,0:38:99:0,111,1536	0/0:25,0:25:72.22:0,72,972	1/1:0,21:21:60.20:956,60,0	1/1:3,24:27:63.68:1008,64,0	1/1:0,27:27:72.25:1149,72,0	1/1:1,38:40:99:1667,105,0	0/0:36,0:36:99:0,108,1511	0/0:19,0:19:57.19:0,57,795	0/0:15,0:15:42.14:0,42,587	0/0:21,0:21:63.21:0,63,879	1/1:2,35:37:99:1678,105,0	1/1:1,24:25:53.25:948,53,0	1/1:2,25:27:60.01:1002,60,0	1/1:4,26:29:72.25:1150,72,0	1/1:0,21:21:57.19:910,57,0	1/1:0,30:30:84.29:1342,84,0	1/1:3,20:23:24.13:949,24,0	1/1:0,36:36:99:1630,102,0	1/1:2,19:21:54.18:863,54,0
chr10	20747114	.	C	CACAA	21065.59	PASS	AB=0.537;AC=35;AF=0.625;AN=56;BaseQRankSum=19.431;DP=528;FS=5.380;HRun=0;HaplotypeScore=223.4343;InbreedingCoeff=0.9204;MQ=93.87;MQ0=0;MQRankSum=-18.246;QD=78.60;ReadPosRankSum=6.100;VQSLOD=4.7384;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,14:17:48.16:1229,48,0	0/0:13,0:13:36.12:0,36,755	0/0:34,0:34:99:0,102,2029	0/0:24,0:24:66.22:0,66,1310	0/0:33,0:33:99:0,99,2038	1/1:1,13:14:39.13:1063,39,0	1/1:0,11:11:33.11:922,33,0	1/1:0,3:5:15.05:372,15,0	1/1:1,18:20:60.19:1559,60,0	0/0:41,0:41:99:0,120,2499	0/0:17,0:17:51.17:0,51,1036	1/1:0,14:14:42.14:1188,42,0	1/1:0,23:24:72.25:2020,72,0	1/1:1,12:13:39.12:1019,39,0	1/1:1,17:18:54.17:1452,54,0	0/0:41,0:41:99:0,123,2580	0/0:28,0:28:75.23:0,75,1517	0/0:15,0:15:45.15:0,45,927	0/0:14,0:14:39.11:0,39,778	1/1:0,19:19:54.19:1478,54,0	1/1:0,9:9:26.92:636,27,0	1/1:0,17:18:54.18:1465,54,0	1/1:0,13:13:39.13:1069,39,0	1/1:2,7:9:24.04:578,24,0	1/1:1,15:16:48.16:1331,48,0	0/1:3,19:22:55.67:1523,0,56	1/1:0,19:19:57.20:1573,57,0	1/1:0,7:7:21.07:588,21,0
chr10	20747115	.	TGGCGC	T	7885.17	PASS	AB=0.525;AC=35;AF=0.625;AN=56;BaseQRankSum=19.379;DP=519;FS=8.914;HRun=0;HaplotypeScore=275.5980;InbreedingCoeff=0.9135;MQ=93.10;MQ0=0;MQRankSum=-19.049;QD=29.98;ReadPosRankSum=7.282;VQSLOD=3.2964;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:3,14:17:42.05:458,42,0	0/0:13,0:13:39.13:0,39,1251	0/0:33,0:33:96.33:0,96,2742	0/0:23,0:23:66.23:0,66,1894	0/0:33,0:33:96.32:0,96,2980	1/1:1,13:14:36.06:378,36,0	1/1:0,11:11:33.07:341,33,0	1/1:2,3:5:9.01:128,9,0	1/1:1,18:19:49.99:565,50,0	0/0:40,0:40:99:0,117,3544	0/0:17,0:17:48.14:0,48,1340	1/1:0,14:14:39.98:409,40,0	1/1:1,23:24:72.05:718,72,0	1/1:0,12:12:36.07:366,36,0	1/1:0,17:17:51.11:521,51,0	0/0:41,0:41:99:0,123,3807	0/0:27,0:27:81.28:0,81,2570	0/0:15,0:15:45.15:0,45,1442	0/0:14,0:14:42.14:0,42,1232	1/1:0,19:19:54.14:586,54,0	1/1:0,9:9:27.08:308,27,0	1/1:1,17:18:54.06:518,54,0	1/1:0,13:13:39.04:379,39,0	1/1:1,7:8:18.02:169,18,0	1/1:1,15:16:45.09:459,45,0	0/1:2,19:21:36.73:697,0,37	1/1:0,19:19:57.10:622,57,0	1/1:0,7:7:21.07:263,21,0
chr10	20747124	.	A	AAGAAC	33774.38	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=18.551;DP=649;FS=10.191;HRun=0;HaplotypeScore=285.2811;InbreedingCoeff=0.9729;MQ=80.95;MQ0=0;MQRankSum=-18.987;QD=82.38;ReadPosRankSum=0.988;VQSLOD=3.0846;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,14:21:54.19:1512,54,0	0/0:16,0:16:45.15:0,45,985	0/0:28,0:28:80.06:0,80,1595	0/0:22,0:22:2.93:0,3,946	0/0:31,0:31:90.30:0,90,1963	1/1:16,13:29:84.29:2494,84,0	1/1:8,11:19:54.18:1469,54,0	1/1:27,3:30:81.27:2337,81,0	1/1:6,19:26:78.27:2220,78,0	0/0:34,0:34:99:0,99,2184	0/0:15,0:15:45.14:0,45,962	1/1:7,14:21:63.22:1859,63,0	1/1:1,24:25:75.26:2245,75,0	1/1:16,12:28:84.29:2476,84,0	1/1:10,17:27:78.27:2324,78,0	0/0:37,0:37:99:0,105,2324	0/0:26,0:26:78.27:0,78,1721	0/0:15,0:15:45.15:0,45,983	0/0:15,0:15:42.14:0,42,897	1/1:4,19:23:66.23:1926,66,0	1/1:6,9:15:42.07:1046,42,0	1/1:8,17:25:75.26:2150,75,0	1/1:9,13:22:57.19:1602,57,0	1/1:3,7:11:27.09:752,27,0	1/1:6,15:21:60.21:1799,60,0	1/1:11,19:30:23.33:2425,23,0	1/1:7,19:27:81.26:2257,81,0	1/1:3,7:10:30.10:883,30,0
chr10	20748226	.	CT	C	4725.28	PASS	AB=0.770;AC=17;AF=0.304;AN=56;BaseQRankSum=-6.865;DP=771;FS=1.448;HRun=3;HaplotypeScore=203.6787;InbreedingCoeff=-0.4162;MQ=55.19;MQ0=1;MQRankSum=-9.402;QD=9.34;ReadPosRankSum=-1.263;VQSLOD=1.9331;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:22,13:35:99:271,0,494	0/0:8,0:8:18.02:0,18,234	0/0:30,0:25:68.63:0,69,932	0/0:35,0:24:33.13:0,33,631	0/0:36,0:36:99:0,102,1402	0/1:19,7:26:99:181,0,426	0/1:18,7:25:99:184,0,433	0/1:33,12:41:99:120,0,578	0/1:19,17:36:99:485,0,361	0/0:29,0:29:71.40:0,71,953	0/0:15,0:15:42.02:0,42,550	0/1:20,0:20:0.14:0,0,224	0/1:33,0:33:10.20:10,0,338	0/1:14,7:21:99:196,0,327	0/1:23,21:44:99:613,0,476	0/0:23,0:23:62.49:0,62,904	0/0:18,1:19:17.20:0,17,694	0/0:20,0:20:60.20:0,60,860	0/0:31,0:32:84.17:0,84,1079	0/1:23,15:38:99:441,0,524	0/0:18,0:18:26.98:0,27,247	0/1:15,9:24:99:221,0,326	0/1:13,13:26:99:406,0,266	0/1:12,9:21:99:185,0,149	0/1:15,16:31:99:471,0,248	0/1:28,0:28:99:292,0,278	0/1:20,18:38:99:508,0,465	0/1:10,5:15:99:140,0,197
chr10	20748227	.	T	TTC	5143.94	PASS	AB=0.944;AC=17;AF=0.304;AN=56;BaseQRankSum=-6.987;DP=780;FS=0.668;HRun=0;HaplotypeScore=219.3499;InbreedingCoeff=-0.4377;MQ=55.10;MQ0=2;MQRankSum=-7.703;QD=10.01;ReadPosRankSum=-1.411;VQSLOD=4.1590;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:35,0:35:99:271,0,857	0/0:9,0:9:18.02:0,18,244	0/0:31,0:26:69.46:0,69,1008	0/0:36,0:23:36.02:0,36,696	0/0:36,0:36:99:0,102,1487	0/1:27,0:27:99:181,0,759	0/1:25,0:25:99:156,0,736	0/1:46,0:42:99:188,0,997	0/1:35,0:35:99:485,0,670	0/0:28,0:28:71.23:0,71,1026	0/0:15,0:15:42.02:0,42,574	0/1:11,10:21:27.16:27,0,382	0/1:17,16:34:75.47:75,0,616	0/1:22,0:22:99:196,0,568	0/1:44,0:44:99:613,0,842	0/0:22,0:22:66.12:0,66,972	0/0:20,0:20:14.64:0,15,732	0/0:20,0:20:60.20:0,60,913	0/0:31,0:31:81.06:0,81,1139	0/1:38,0:38:99:441,0,861	0/0:10,7:18:27.09:0,27,407	0/1:25,0:25:99:222,0,589	0/1:26,0:26:99:406,0,469	0/1:22,0:22:99:213,0,273	0/1:30,0:30:99:471,0,474	0/1:18,13:31:99:474,0,583	0/1:38,0:38:99:584,0,733	0/1:15,0:15:99:140,0,343
chr10	20748239	.	CCTT	C	2671.51	PASS	AB=0.991;AC=23;AF=0.411;AN=56;BaseQRankSum=8.308;DP=780;FS=5.620;HRun=0;HaplotypeScore=240.4295;InbreedingCoeff=-0.1136;MQ=48.19;MQ0=3;MQRankSum=-6.903;QD=5.36;ReadPosRankSum=-4.227;VQSLOD=1.8127;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:37,0:37:99:205,0,699	1/1:8,0:8:11.95:91,12,0	0/0:33,0:23:52.32:0,52,1239	0/0:44,0:26:54.83:0,55,1217	1/1:32,0:32:76.16:553,76,0	0/1:26,1:27:76.34:76,0,623	0/1:25,0:25:99:113,0,444	0/1:45,1:41:99:149,0,711	0/1:32,0:32:11.74:12,0,812	1/1:23,0:23:35.48:314,35,0	1/1:15,0:15:35.58:247,36,0	0/1:22,0:22:37.07:37,0,338	0/1:32,0:32:99:167,0,196	0/1:20,0:20:57.68:58,0,461	0/0:41,0:41:27.02:0,27,1085	0/0:27,0:27:78.13:0,78,1669	0/0:18,0:19:54.18:0,54,1189	0/0:23,0:23:69.24:0,69,1559	0/1:30,0:29:99:367,0,151	0/0:36,0:36:10.56:0,11,907	0/1:20,0:20:99:149,0,111	0/1:26,0:26:99:105,0,464	0/1:30,0:30:29.86:30,0,770	0/0:22,0:22:22.23:0,22,492	0/1:29,0:29:69.52:70,0,700	0/1:31,0:31:55.72:56,0,957	0/0:36,1:37:28.05:0,28,924	0/1:12,1:13:54.98:55,0,260
chr10	20748240	.	CTTCTCCTTT	C	7115.67	PASS	AB=0.774;AC=10;AF=0.179;AN=56;BaseQRankSum=-6.034;DP=776;FS=0.395;HRun=0;HaplotypeScore=310.0465;InbreedingCoeff=0.7008;MQ=47.21;MQ0=3;MQRankSum=-4.559;QD=59.80;ReadPosRankSum=-3.849;VQSLOD=3.4106;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:57.70:0,58,3009	1/1:0,8:8:12.04:379,12,0	0/0:31,0:21:12.54:0,13,2225	0/0:46,0:27:64.59:0,65,2495	1/1:0,32:32:84.28:2243,84,0	0/0:27,0:27:52.26:0,52,2388	0/0:25,0:25:3.38:0,3,1516	0/0:46,0:41:44.37:0,44,2632	0/0:32,0:32:71.55:0,72,3223	1/1:0,22:22:60.68:1640,61,0	1/1:2,13:15:39.13:948,39,0	0/0:22,0:22:38.34:0,38,1129	0/0:30,0:30:8.82:0,9,799	0/0:20,0:20:60.21:0,60,1999	0/0:41,0:41:99:0,116,4327	0/0:27,0:27:78.27:0,78,3573	0/0:20,0:20:57.20:0,57,2573	0/0:24,0:24:72.25:0,72,2961	0/1:5,24:28:99:1888,0,309	0/0:35,0:35:99:0,101,3515	0/0:20,0:20:19.18:0,19,479	0/0:26,0:26:45.14:0,45,2138	0/0:30,0:30:85.38:0,85,2972	0/0:22,0:22:37.31:0,37,1479	0/0:28,0:28:51.58:0,52,2656	0/0:31,0:31:84.03:0,84,3219	0/0:37,0:37:99:0,108,3810	0/1:13,0:13:17.68:18,0,977
chr10	20749576	.	G	GTT	4390.67	PASS	AB=0.688;AC=39;AF=0.696;AN=56;BaseQRankSum=4.439;DP=539;FS=0.000;HRun=14;HaplotypeScore=110.7998;InbreedingCoeff=0.3327;MQ=60.13;MQ0=3;MQRankSum=1.646;QD=9.71;ReadPosRankSum=-1.258;VQSLOD=3.2080;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:35:45.90:221,46,0	1/1:3,7:11:13.86:162,14,0	0/0:13,0:9:2.34:0,2,42	0/0:10,0:8:4.99:0,5,53	1/1:8,9:19:12.78:364,13,0	1/1:9,3:24:13.88:207,14,0	1/1:12,0:24:5.85:118,6,0	1/1:19,2:34:7.24:242,7,0	0/1:10,0:20:23.31:72,0,23	1/1:16,14:32:53.88:574,54,0	1/1:5,10:17:10.95:369,11,0	0/1:7,0:11:9.66:35,0,10	0/1:13,0:21:15.88:95,0,16	1/1:5,2:15:6.14:142,6,0	1/1:5,7:18:30.06:327,30,0	0/0:15,0:15:33.26:0,33,277	0/0:22,0:25:45.90:0,46,448	0/0:20,0:23:23.04:0,23,364	1/1:8,8:20:15.58:379,16,0	0/1:11,0:12:24.45:157,0,24	1/1:3,1:8:11.07:67,11,0	1/1:6,0:22:18.84:136,19,0	0/1:4,0:13:0.75:51,0,1	0/1:7,0:13:9.82:15,0,10	0/1:7,2:21:5.50:189,0,6	1/1:6,2:13:23.24:151,23,0	1/1:4,1:17:38.08:216,38,0	1/1:11,0:20:5.24:102,5,0
chr10	20749652	.	TCA	T	12513.42	PASS	AB=0.761;AC=36;AF=0.643;AN=56;BaseQRankSum=13.997;DP=452;FS=3.284;HRun=0;HaplotypeScore=88.7298;InbreedingCoeff=0.8601;MQ=72.44;MQ0=6;MQRankSum=-3.380;QD=41.16;ReadPosRankSum=1.852;VQSLOD=6.4877;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,29:32:87.28:1390,87,0	0/0:9,0:9:21.07:0,21,426	0/0:13,0:10:27.02:0,27,382	0/1:10,0:9:5.17:5,0,321	0/0:16,0:15:45.15:0,45,901	1/1:0,20:19:57.19:926,57,0	1/1:1,25:23:63.22:1027,63,0	1/1:0,19:19:57.11:827,57,0	1/1:0,15:15:36.12:584,36,0	0/0:17,0:17:51.17:0,51,1016	0/0:15,0:14:42.14:0,42,849	1/1:0,14:14:39.13:632,39,0	1/1:0,17:17:45.15:733,45,0	1/1:0,13:13:30.10:487,30,0	1/1:0,17:17:48.16:782,48,0	0/0:13,0:13:39.13:0,39,782	0/0:33,0:33:99:0,99,1892	0/0:15,0:14:45.12:0,45,838	0/0:17,0:17:51.18:0,51,1036	1/1:0,6:6:15.05:244,15,0	1/1:0,23:23:54.18:878,54,0	1/1:0,11:11:30.10:484,30,0	1/1:0,15:15:45.15:728,45,0	1/1:0,16:16:36.12:585,36,0	1/1:1,13:13:39.13:625,39,0	0/1:1,11:12:24.84:502,0,25	1/1:0,15:15:39.13:635,39,0	1/1:0,9:9:27.09:440,27,0
chr10	20749785	.	T	TCTG	19721.09	PASS	AB=0.571;AC=35;AF=0.625;AN=56;BaseQRankSum=-11.390;DP=599;FS=0.000;HRun=0;HaplotypeScore=90.3560;InbreedingCoeff=0.9508;MQ=87.32;MQ0=0;MQRankSum=-6.369;QD=48.94;ReadPosRankSum=3.610;VQSLOD=6.7573;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,37:43:99:2232,99,0	0/0:6,0:6:15.04:0,15,225	0/0:24,0:24:69.09:0,69,1040	0/0:23,0:23:60.14:0,60,936	0/0:19,0:19:54.17:0,54,869	1/1:2,18:20:39.13:881,39,0	1/1:4,22:27:60.21:1359,60,0	1/1:8,11:20:54.17:1099,54,0	1/1:1,19:21:48.16:1086,48,0	0/0:22,0:22:57.19:0,57,948	0/0:12,0:12:36.12:0,36,600	1/1:0,15:16:30.10:679,30,0	1/1:1,22:23:60.21:1357,60,0	1/1:2,20:22:48.16:1073,48,0	1/1:2,17:20:42.14:949,42,0	0/0:20,0:20:57.19:0,57,949	0/0:31,0:31:87.30:0,87,1444	0/0:24,0:24:72.25:0,72,1199	0/0:15,0:15:39.13:0,39,650	1/1:2,14:16:42.14:937,42,0	1/1:5,29:37:72.01:1630,72,0	1/1:3,9:12:24.08:543,24,0	1/1:0,17:18:42.14:950,42,0	1/1:0,30:30:66.23:1494,66,0	1/1:3,16:19:36.12:803,36,0	0/1:5,15:19:1.82:951,0,2	1/1:1,18:19:42.14:950,42,0	1/1:0,20:20:33.11:748,33,0
chr10	20749894	.	A	AGGG	6329.49	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=4.227;DP=528;FS=13.685;HRun=8;HaplotypeScore=126.4152;InbreedingCoeff=0.7730;MQ=72.09;MQ0=0;MQRankSum=-8.433;QD=15.00;ReadPosRankSum=-0.382;VQSLOD=1.2896;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:18,3:20:6.91:99,7,0	1/1:2,0:9:7.42:16,7,0	0/0:14,0:14:31.63:0,32,394	0/0:18,0:18:48.04:0,48,613	1/1:7,0:21:0.33:31,0,0	1/1:7,8:17:27.07:502,27,0	1/1:16,11:31:36.05:517,36,0	1/1:3,2:7:11.98:144,12,0	1/1:7,9:18:30.08:539,30,0	1/1:4,0:15:6.13:19,6,0	1/1:1,0:13:12.46:27,12,0	1/1:6,15:24:42.10:762,42,0	1/1:8,10:20:21.05:382,21,0	1/1:4,9:18:29.81:490,30,0	1/1:5,0:27:47.32:354,47,0	0/0:18,0:18:45.10:0,45,575	0/0:44,0:44:99:0,120,1537	0/0:12,0:12:27.03:0,27,336	1/1:6,0:12:8.72:19,9,0	1/1:16,4:21:21.01:342,21,0	1/1:20,10:35:14.99:261,15,0	1/1:6,6:13:9.30:181,9,0	1/1:7,2:9:3.01:61,3,0	1/1:13,12:25:26.11:489,26,0	1/1:11,5:17:21.05:362,21,0	1/1:12,2:15:8.97:103,9,0	1/1:5,15:21:30.08:568,30,0	1/1:6,3:10:3.01:61,3,0
chr10	20750033	.	T	TC	44.53	PASS	AB=0.950;AC=6;AF=0.273;AN=22;BaseQRankSum=5.533;DP=170;FS=3.533;HRun=0;HaplotypeScore=67.0166;InbreedingCoeff=0.2381;MQ=63.87;MQ0=15;MQRankSum=-2.273;QD=0.86;ReadPosRankSum=-2.770;VQSLOD=1.1148;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	1/1:3,0:3:2.50:12,3,0	0/0:31,0:8:12.12:0,12,189	0/1:17,0:6:0.48:0,0,55	1/1:9,5:14:0.22:52,0,0	./.	./.	./.	./.	0/0:12,0:12:8.31:0,8,181	0/0:10,0:10:3.45:0,3,85	./.	./.	./.	./.	0/0:7,0:7:18.04:0,18,206	0/0:36,0:36:83.18:0,83,826	0/0:18,0:17:52.96:0,53,536	0/1:16,2:16:65.47:65,0,94	./.	./.	./.	./.	./.	./.	0/0:2,0:2:5.92:0,6,39	./.	./.
chr10	20750113	.	C	CT	149.81	PASS	AB=0.920;AC=11;AF=0.324;AN=34;BaseQRankSum=4.218;DP=177;FS=16.753;HRun=0;HaplotypeScore=37.5212;InbreedingCoeff=0.4569;MQ=87.79;MQ0=3;MQRankSum=-0.886;QD=5.17;ReadPosRankSum=-4.024;VQSLOD=0.8855;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,3:3:6.02:84,6,0	0/0:8,0:8:24.04:0,24,313	0/1:12,0:10:6.79:7,0,265	0/0:12,0:12:2.35:0,2,244	0/0:13,0:13:36.59:0,37,502	./.	./.	0/1:3,0:2:0:0,0,0	0/1:1,0:1:0:0,0,0	0/0:17,0:16:48.16:0,48,669	0/0:13,0:13:36.12:0,36,503	./.	./.	./.	1/1:0,2:2:6.02:85,6,0	0/0:10,0:10:30.09:0,30,403	0/0:37,0:37:99:0,111,1551	0/0:15,0:14:45.11:0,45,607	0/0:21,0:21:60.20:0,60,826	./.	1/1:0,3:3:3.01:44,3,0	0/1:1,0:1:0:0,0,0	./.	./.	./.	0/1:1,2:3:35.93:40,0,36	./.	./.
chr10	20750300	.	GAA	G	2892.96	PASS	AB=0.665;AC=37;AF=0.661;AN=56;BaseQRankSum=1.779;DP=483;FS=8.189;HRun=17;HaplotypeScore=101.2693;InbreedingCoeff=0.4206;MQ=71.46;MQ0=3;MQRankSum=-2.869;QD=8.58;ReadPosRankSum=3.068;VQSLOD=1.0925;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:9,10:19:71.23:149,0,71	1/1:3,1:8:16.60:82,17,0	0/0:43,0:15:15.27:0,15,151	0/0:33,0:19:17.35:0,17,112	1/1:7,0:18:24.63:112,25,0	0/1:5,5:15:18.79:100,0,19	1/1:5,10:18:8.70:188,9,0	1/1:10,12:28:1.29:241,1,0	0/0:1,0:6:11.98:0,12,43	1/1:5,0:17:23.57:104,24,0	1/1:5,2:12:16.58:85,17,0	0/1:7,0:10:3.51:4,0,19	1/1:6,10:16:10.38:215,10,0	0/1:4,6:12:5.43:125,0,5	1/1:8,0:22:31.24:135,31,0	0/0:13,0:15:34.82:0,35,369	0/0:23,0:27:61.70:0,62,637	0/0:18,0:19:46.99:0,47,529	1/1:7,0:15:19.09:81,19,0	0/1:8,7:16:25.07:146,0,25	0/1:4,2:7:1.47:57,0,1	1/1:6,13:20:3.49:258,3,0	1/1:2,3:4:5.97:47,6,0	1/1:3,7:10:19.64:152,20,0	1/1:5,10:15:11.53:203,12,0	1/1:6,9:17:19.95:173,20,0	0/1:8,6:16:19.91:132,0,20	1/1:4,14:18:37.06:293,37,0
chr10	20750756	.	CTT	C	2703	PASS	AB=0.803;AC=31;AF=0.554;AN=56;BaseQRankSum=1.207;DP=470;FS=2.042;HRun=16;HaplotypeScore=66.0955;InbreedingCoeff=0.4886;MQ=68.56;MQ0=0;MQRankSum=0.439;QD=8.78;ReadPosRankSum=6.316;VQSLOD=1.0468;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:10,9:19:12.91:208,0,13	0/0:3,0:8:16.24:0,16,135	0/1:16,0:8:5.87:6,0,29	0/1:13,1:11:10.02:52,0,10	0/0:10,0:19:24.05:0,24,196	1/1:9,6:15:3.99:88,4,0	1/1:8,12:20:32.61:275,33,0	1/1:16,14:30:3.98:213,4,0	1/1:5,5:10:11.80:133,12,0	0/0:11,0:21:38.96:0,39,332	0/0:18,0:21:45.17:0,45,397	1/1:9,11:20:15.97:280,16,0	1/1:6,5:11:11.81:96,12,0	1/1:3,6:9:7.11:64,7,0	0/0:7,0:11:10.75:0,11,84	0/0:13,0:14:34.68:0,35,322	0/0:24,0:31:76.63:0,77,662	0/0:19,0:20:39.22:0,39,308	0/0:10,0:17:36.65:0,37,346	0/1:18,4:22:0.01:107,0,0	0/1:7,1:8:17.03:19,0,17	1/1:6,5:13:8.77:158,9,0	1/1:11,8:20:30.42:270,30,0	1/1:5,11:18:27.68:286,28,0	0/1:7,9:17:19.28:113,0,19	1/1:6,9:15:26.82:225,27,0	1/1:6,5:11:13.59:142,14,0	0/1:12,6:18:6.89:165,0,7
chr10	20750932	.	G	GT	6189	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=3.589;DP=412;FS=0.389;HRun=6;HaplotypeScore=93.1316;InbreedingCoeff=0.9910;MQ=61.10;MQ0=2;MQRankSum=-5.816;QD=26.11;ReadPosRankSum=0.960;VQSLOD=4.7946;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,9:15:41.86:428,42,0	0/0:8,0:8:19.51:0,20,174	0/0:15,0:13:26.98:0,27,254	0/0:10,0:10:27.05:0,27,269	0/0:27,0:26:47.51:0,48,497	1/1:7,7:14:35.88:347,36,0	1/1:7,1:8:23.90:229,24,0	1/1:8,22:29:78.18:923,78,0	1/1:9,4:13:32.73:280,33,0	0/0:16,0:16:41.58:0,42,407	0/0:15,0:15:29.68:0,30,292	1/1:12,6:18:50.03:421,50,0	1/1:9,3:12:32.22:287,32,0	1/1:4,2:6:17.85:151,18,0	1/1:1,14:15:39.12:491,39,0	0/0:12,0:12:36.05:0,36,354	0/0:26,0:26:72.16:0,72,734	0/0:32,0:32:96.19:0,96,969	0/0:14,0:14:32.42:0,32,319	1/1:9,1:11:23.96:248,24,0	1/1:0,4:4:12.04:148,12,0	1/1:6,5:11:32.82:298,33,0	1/1:7,2:9:23.94:234,24,0	1/1:7,3:10:20.91:206,21,0	1/1:10,5:15:38.77:332,39,0	1/1:8,6:14:41.89:419,42,0	1/1:15,6:21:29.39:449,29,0	1/1:6,5:11:32.78:295,33,0
chr10	20750936	.	TTTG	T	8923.43	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=1.146;DP=419;FS=0.765;HRun=0;HaplotypeScore=99.6815;InbreedingCoeff=0.9931;MQ=58.04;MQ0=2;MQRankSum=-5.836;QD=39.31;ReadPosRankSum=-1.440;VQSLOD=5.5749;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,6:16:45.10:609,45,0	0/0:8,0:8:24.08:0,24,367	0/0:15,0:13:30.02:0,30,396	0/0:11,0:11:30.03:0,30,396	0/0:27,0:26:69.03:0,69,1000	1/1:10,5:15:39.09:561,39,0	1/1:4,4:8:24.04:316,24,0	1/1:27,2:28:84.21:1082,84,0	1/1:5,9:14:39.04:543,39,0	0/0:17,0:17:50.99:0,51,725	0/0:13,0:13:33.08:0,33,485	1/1:8,10:18:51.13:742,51,0	1/1:4,8:12:33.11:483,33,0	1/1:2,4:6:18.06:273,18,0	0/0:15,0:15:42.11:0,42,492	0/0:12,0:12:36.10:0,36,751	0/0:26,0:26:75.25:0,75,1543	0/0:33,0:33:99:0,99,1968	0/0:15,0:15:39.10:0,39,578	1/1:2,9:11:27.05:361,27,0	1/1:4,0:4:12.04:147,12,0	1/1:5,6:11:33.11:498,33,0	1/1:4,5:9:27.03:369,27,0	1/1:5,6:11:27:338,27,0	1/1:6,9:15:39.13:602,39,0	1/1:7,7:14:42.14:616,42,0	1/1:11,10:21:54.18:836,54,0	1/1:7,6:13:39.02:548,39,0
chr10	20750956	.	TTTG	T	3094.12	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=11.184;DP=392;FS=6.635;HRun=0;HaplotypeScore=115.0837;InbreedingCoeff=0.9575;MQ=49.15;MQ0=3;MQRankSum=-7.668;QD=15.55;ReadPosRankSum=1.320;VQSLOD=3.1983;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:17:27.64:183,28,0	0/0:8,0:8:23.81:0,24,175	0/0:16,0:13:35.13:0,35,449	0/0:9,0:8:21.02:0,21,283	0/0:18,0:17:50.55:0,51,420	1/1:11,0:11:25.64:221,26,0	1/1:7,0:7:13.26:82,13,0	1/1:25,4:27:49.55:571,50,0	1/1:10,1:11:26.76:165,27,0	0/0:13,0:13:38.74:0,39,309	0/0:9,0:9:26.57:0,27,187	1/1:17,2:19:40.03:317,40,0	1/1:9,1:10:26.13:219,26,0	1/1:5,0:5:11.06:54,11,0	0/0:18,0:18:51.17:0,51,1021	0/0:15,0:15:45.15:0,45,853	0/0:31,0:31:93.30:0,93,1732	0/0:43,0:42:99:0,123,2226	0/0:13,0:13:38.80:0,39,360	1/1:7,0:7:12.26:85,12,0	1/1:2,0:2:0.89:2,1,0	1/1:8,1:9:22.94:174,23,0	1/1:6,1:7:17.77:138,18,0	1/1:9,0:9:15.89:87,16,0	1/1:11,1:12:29.03:170,29,0	1/1:13,1:14:33.87:270,34,0	1/1:18,0:18:40.36:273,40,0	1/1:8,4:12:35.04:306,35,0
chr10	20750958	.	TGTTTTG	T	9097.70	PASS	AB=1.000;AC=36;AF=0.643;AN=56;BaseQRankSum=6.462;DP=384;FS=4.651;HRun=0;HaplotypeScore=115.9301;InbreedingCoeff=0.8682;MQ=50.53;MQ0=3;MQRankSum=-7.908;QD=41.54;ReadPosRankSum=1.045;VQSLOD=4.7352;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:16:39.13:666,39,0	0/0:8,0:8:24.03:0,24,254	0/0:16,0:13:24.71:0,25,643	0/0:9,0:8:23.85:0,24,352	0/1:18,0:17:0.52:1,0,463	1/1:9,0:9:27.09:504,27,0	1/1:7,0:7:21.03:322,21,0	1/1:27,0:25:70.87:1162,71,0	1/1:11,0:11:30.10:561,30,0	0/0:13,0:13:39.07:0,39,436	0/1:9,0:9:3.71:4,0,218	1/1:19,0:19:56.86:950,57,0	1/1:10,0:10:27.09:483,27,0	1/1:4,0:4:12.04:230,12,0	0/0:18,0:18:54.18:0,54,1609	0/0:15,0:15:45.15:0,45,1352	0/0:31,0:31:93.32:0,93,2751	0/0:42,0:41:99:0,123,3454	0/0:13,0:13:14.34:0,14,384	1/1:7,0:7:14.72:217,15,0	1/1:2,0:2:3.01:46,3,0	1/1:9,0:9:27.05:458,27,0	1/1:7,0:7:21.07:357,21,0	1/1:9,0:9:20.81:395,21,0	1/1:11,0:11:33.11:611,33,0	1/1:14,0:14:41.88:660,42,0	1/1:13,5:18:42.14:814,42,0	1/1:12,0:12:36.12:659,36,0
chr10	20750959	.	GT	G	1973.50	PASS	AB=0.875;AC=42;AF=0.750;AN=56;BaseQRankSum=13.810;DP=386;FS=4.386;HRun=4;HaplotypeScore=102.3188;InbreedingCoeff=0.6862;MQ=50.46;MQ0=3;MQRankSum=-7.543;QD=7.80;ReadPosRankSum=3.300;VQSLOD=0.5601;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:17:13.04:39,13,0	1/1:1,7:8:24.05:262,24,0	0/0:16,0:13:31.38:0,31,432	0/0:11,0:9:23.97:0,24,278	1/1:8,10:17:45.05:467,45,0	1/1:9,0:9:12.57:33,13,0	1/1:7,0:7:2.54:13,3,0	1/1:27,0:25:22.41:62,22,0	1/1:11,0:11:14.73:38,15,0	1/1:1,12:13:36.10:413,36,0	1/1:1,8:9:24.01:249,24,0	1/1:18,1:19:17.11:84,17,0	1/1:10,0:10:4.51:18,5,0	1/1:4,0:4:6.48:17,6,0	0/0:18,0:18:54.15:0,54,728	0/0:15,0:15:45.15:0,45,622	0/0:31,0:31:93.31:0,93,1282	0/0:42,0:41:99:0,120,1634	0/1:8,4:12:70.56:217,0,71	0/1:7,0:7:0.89:6,0,1	1/1:2,0:2:1.55:4,2,0	1/1:9,0:9:10.69:27,11,0	1/1:7,0:7:1.43:12,1,0	1/1:9,0:9:11.41:30,11,0	1/1:11,0:11:16.43:42,16,0	1/1:14,0:14:4.46:24,4,0	1/1:18,0:18:22.87:64,23,0	1/1:12,0:12:14.27:37,14,0
chr10	20750962	.	TTG	T	8688.38	PASS	AB=1.000;AC=43;AF=0.768;AN=56;BaseQRankSum=13.626;DP=383;FS=1.315;HRun=0;HaplotypeScore=85.2286;InbreedingCoeff=0.8455;MQ=52.10;MQ0=2;MQRankSum=-9.068;QD=35.32;ReadPosRankSum=1.949;VQSLOD=7.1754;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,14:16:39.12:564,39,0	1/1:8,0:8:23.66:268,24,0	0/0:17,0:14:22.53:0,23,532	0/0:12,0:10:14.90:0,15,251	1/1:13,0:18:42.18:420,42,0	1/1:2,6:8:24.08:365,24,0	1/1:0,7:7:21.02:274,21,0	1/1:8,18:25:71.26:963,71,0	1/1:1,10:11:30.10:446,30,0	1/1:13,0:13:36:393,36,0	1/1:8,0:8:24.07:284,24,0	1/1:4,14:18:53.81:741,54,0	1/1:2,8:10:27.08:367,27,0	1/1:0,4:4:12.04:183,12,0	0/0:19,0:19:57.19:0,57,991	0/0:16,0:16:48.15:0,48,840	0/0:32,0:32:96.28:0,96,1681	0/0:41,0:40:99:0,117,2099	0/1:7,0:12:73.71:138,0,74	1/1:1,4:5:9.03:137,9,0	1/1:0,2:2:3.01:46,3,0	1/1:1,7:8:24.04:329,24,0	1/1:1,6:7:21.05:286,21,0	1/1:1,8:9:21.07:320,21,0	1/1:1,10:11:33.11:492,33,0	1/1:4,10:14:39.12:542,39,0	1/1:8,10:18:42.13:632,42,0	1/1:4,8:12:36.12:501,36,0
chr10	20750966	.	TG	T	1685.81	PASS	AB=0.692;AC=9;AF=0.161;AN=56;BaseQRankSum=-1.259;DP=367;FS=8.803;HRun=1;HaplotypeScore=98.6352;InbreedingCoeff=0.7966;MQ=51.80;MQ0=1;MQRankSum=-1.928;QD=31.81;ReadPosRankSum=0.459;VQSLOD=2.4625;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:34.26:0,34,202	1/1:1,7:8:24.06:294,24,0	0/0:16,0:13:35.71:0,36,533	0/0:13,0:10:21.38:0,21,306	1/1:5,11:16:48.10:580,48,0	0/0:8,0:8:22.93:0,23,130	0/0:7,0:7:20.09:0,20,118	0/0:28,0:27:74.02:0,74,570	0/0:11,0:11:26.95:0,27,125	1/1:0,12:12:36.12:484,36,0	1/1:0,8:8:24.07:296,24,0	0/0:16,0:16:25.30:0,25,192	0/0:9,0:9:21.64:0,22,122	0/0:4,0:4:10.91:0,11,47	0/0:18,0:18:54.18:0,54,852	0/0:15,0:15:45.15:0,45,713	0/0:31,0:31:93.32:0,93,1466	0/0:42,0:41:99:0,123,1878	0/1:5,4:9:97.17:196,0,97	0/0:4,0:4:8.34:0,8,37	0/0:2,0:2:2.84:0,3,14	0/0:8,0:8:22.41:0,22,113	0/0:7,0:7:15.43:0,15,67	0/0:8,0:8:19.48:0,19,87	0/0:11,0:11:31.36:0,31,167	0/0:12,0:12:34.26:0,34,211	0/0:17,0:17:37.37:0,37,197	0/0:11,0:11:27.11:0,27,125
chr10	20751133	.	TAA	T	4786.45	PASS	AB=1.000;AC=47;AF=0.839;AN=56;BaseQRankSum=6.959;DP=293;FS=2.736;HRun=13;HaplotypeScore=54.6806;InbreedingCoeff=0.7936;MQ=67.15;MQ0=0;MQRankSum=-5.070;QD=21.09;ReadPosRankSum=-0.473;VQSLOD=4.0408;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,11:12:30.04:291,30,0	1/1:0,0:1:2.74:12,3,0	0/0:9,0:8:7.93:0,8,61	0/1:6,0:4:0.66:1,0,25	1/1:0,0:10:13.70:59,14,0	1/1:1,10:12:29.78:274,30,0	1/1:3,13:16:36:349,36,0	1/1:6,22:29:68.78:641,69,0	1/1:2,7:9:24.02:233,24,0	1/1:0,0:9:24.70:107,25,0	1/1:0,0:9:24.70:107,25,0	1/1:0,10:10:30.05:291,30,0	1/1:0,8:8:21.03:204,21,0	1/1:1,4:5:8.99:87,9,0	1/1:0,5:5:12.02:116,12,0	0/0:9,0:11:32.57:0,33,392	0/0:28,0:29:65.66:0,66,846	0/0:17,0:17:45.07:0,45,603	1/1:0,0:12:27.76:118,28,0	1/1:0,6:6:18.03:175,18,0	1/1:1,3:4:5.99:58,6,0	1/1:0,2:2:6.01:58,6,0	1/1:0,8:8:24.04:233,24,0	1/1:1,10:11:30.03:291,30,0	1/1:0,4:4:12.02:116,12,0	1/1:0,7:10:26.25:210,26,0	1/1:1,23:24:63.09:611,63,0	1/1:0,5:5:15.02:145,15,0
chr10	20751386	.	G	GGT	2108.23	PASS	AC=30;AF=0.714;AN=42;BaseQRankSum=4.981;DP=295;FS=25.320;HRun=0;HaplotypeScore=68.5399;InbreedingCoeff=0.6652;MQ=78.22;MQ0=4;MQRankSum=-5.035;QD=14.64;ReadPosRankSum=-3.835;VQSLOD=1.1335;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,7:19:14.90:212,15,0	./.	0/0:20,0:17:14.57:0,15,189	0/0:27,0:20:8.34:0,8,106	./.	1/1:5,3:8:3.01:49,3,0	1/1:8,2:10:9.01:121,9,0	1/1:26,2:28:62.53:756,63,0	./.	1/1:3,0:5:1.39:30,1,0	./.	1/1:5,3:8:6.02:86,6,0	1/1:1,4:5:3.01:48,3,0	1/1:11,2:13:15.04:214,15,0	./.	0/0:12,0:12:30.10:0,30,382	0/0:26,0:26:69.22:0,69,877	0/0:18,0:18:54.15:0,54,672	1/1:8,0:13:15.87:86,16,0	1/1:4,0:4:6.01:72,6,0	./.	./.	1/1:0,1:1:3.01:48,3,0	1/1:3,4:7:3.01:49,3,0	0/0:0,2:2:0:0,0,0	1/1:4,3:7:14.98:187,15,0	1/1:5,0:5:8.99:107,9,0	1/1:1,9:10:12.04:193,12,0
chr10	20751404	.	ATC	A	553.42	PASS	AB=1.000;AC=22;AF=0.611;AN=36;BaseQRankSum=6.859;DP=264;FS=14.925;HRun=0;HaplotypeScore=65.3193;InbreedingCoeff=0.5445;MQ=87.16;MQ0=7;MQRankSum=-5.116;QD=4.69;ReadPosRankSum=-0.903;VQSLOD=0.7202;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,1:16:8.77:52,9,0	./.	0/0:24,0:20:16.63:0,17,129	0/1:31,0:17:11.52:12,0,62	./.	1/1:7,0:7:2.96:19,3,0	1/1:4,1:5:1.25:3,1,0	1/1:31,2:33:73.85:461,74,0	./.	0/0:7,0:6:18.02:0,18,289	./.	1/1:4,2:6:3.06:9,3,0	1/1:3,0:3:2.97:20,3,0	./.	./.	0/0:11,0:11:33.10:0,33,603	0/0:28,0:28:84.17:0,84,1477	0/0:17,0:17:51.12:0,51,898	0/0:15,0:12:33.04:0,33,501	./.	./.	./.	1/1:1,0:1:2.97:20,3,0	1/1:3,0:3:2.94:18,3,0	./.	1/1:5,0:5:9.04:28,9,0	1/1:2,0:2:2.98:22,3,0	0/1:6,0:6:1.31:27,0,1
chr10	20751414	.	C	CTA	1453.46	PASS	AB=1.000;AC=19;AF=0.559;AN=34;BaseQRankSum=5.542;DP=264;FS=6.258;HRun=0;HaplotypeScore=65.6069;InbreedingCoeff=0.6229;MQ=89.78;MQ0=6;MQRankSum=-4.323;QD=12.98;ReadPosRankSum=-0.852;VQSLOD=2.2508;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:11:8.71:143,9,0	./.	0/0:26,0:20:10.63:0,11,79	0/1:38,0:20:4.62:5,0,31	./.	1/1:7,0:7:3.01:48,3,0	./.	1/1:32,5:37:85.65:911,86,0	./.	0/0:8,0:7:21.04:0,21,267	./.	./.	1/1:2,0:2:3.01:48,3,0	./.	./.	0/0:10,0:10:24.08:0,24,330	0/0:29,0:29:81.25:0,81,1090	0/0:17,0:17:51.15:0,51,678	0/0:14,0:11:30.10:0,30,411	./.	./.	./.	1/1:1,0:1:3.01:48,3,0	1/1:1,0:1:3.01:48,3,0	0/0:2,0:2:0:0,0,0	1/1:5,0:5:9.03:143,9,0	1/1:2,0:2:2.68:11,3,0	1/1:6,0:6:8.24:185,8,0
chr10	20751457	.	TATATG	T	714.98	PASS	AC=16;AF=0.571;AN=28;BaseQRankSum=1.859;DP=298;FS=0.000;HRun=0;HaplotypeScore=96.3905;InbreedingCoeff=0.6969;MQ=110.49;MQ0=7;MQRankSum=-3.991;QD=17.87;ReadPosRankSum=-0.696;VQSLOD=2.5647;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:61,0:38:20.69:0,21,273	0/0:114,0:56:30.98:0,31,439	1/1:1,4:5:3.01:63,3,0	./.	./.	1/1:9,0:9:6.91:46,7,0	./.	1/1:2,5:7:18.06:366,18,0	1/1:0,5:5:3.01:63,3,0	./.	./.	./.	0/0:14,0:14:6.02:0,6,186	0/0:10,0:10:27.09:0,27,765	0/0:18,0:18:48.16:0,48,1445	0/0:18,0:18:51.15:0,51,1473	1/1:5,5:7:12.04:225,12,0	./.	./.	./.	./.	./.	./.	1/1:1,0:1:3.01:30,3,0	1/1:1,0:1:2.84:14,3,0	1/1:2,0:2:3.01:35,3,0
chr10	20751486	.	TGTG	T	225.57	PASS	AB=0.950;AC=9;AF=0.321;AN=28;BaseQRankSum=5.243;DP=236;FS=1.220;HRun=0;HaplotypeScore=63.6151;InbreedingCoeff=0.5090;MQ=96.52;MQ0=7;MQRankSum=-1.665;QD=2.09;ReadPosRankSum=-2.888;VQSLOD=1.0667;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:39,1:15:0.59:0,1,11	0/1:91,2:41:69.86:70,0,151	0/0:4,0:4:3.01:0,3,74	1/1:0,1:1:3.01:55,3,0	./.	1/1:5,2:5:8.86:87,9,0	./.	0/0:5,0:5:15.05:0,15,341	0/0:7,0:7:5.76:0,6,147	./.	./.	./.	0/0:9,0:9:12.04:0,12,290	0/0:8,0:8:24.08:0,24,582	0/0:18,0:18:54.19:0,54,1289	0/0:18,0:18:54.19:0,54,1316	0/0:8,0:8:24.04:0,24,494	./.	./.	./.	./.	./.	./.	1/1:0,1:1:3.01:50,3,0	1/1:2,1:3:6.90:77,7,0	./.
chr10	20751496	.	ATG	A	174.73	PASS	AB=1.000;AC=15;AF=0.441;AN=34;BaseQRankSum=4.586;DP=215;FS=6.953;HRun=0;HaplotypeScore=50.5267;InbreedingCoeff=0.3474;MQ=95.17;MQ0=6;MQRankSum=-1.288;QD=1.20;ReadPosRankSum=-1.897;VQSLOD=0.1280;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	1/1:3,0:3:3:25,3,0	1/1:31,0:12:0.65:2,1,0	0/1:80,0:31:42.09:42,0,77	0/0:4,0:4:5.61:0,6,68	1/1:1,0:1:2.88:15,3,0	./.	0/1:9,0:7:19.85:36,0,20	./.	0/0:5,0:5:15:0,15,143	0/1:8,0:8:13.42:13,0,80	./.	0/0:1,0:1:2.04:0,2,6	0/0:3,0:2:2.04:0,2,6	1/1:9,0:9:19.89:97,20,0	0/0:6,0:6:18.06:0,18,347	0/0:19,0:19:56.94:0,57,813	0/0:19,0:19:57.11:0,57,1022	0/0:5,0:5:9.01:0,9,88	./.	./.	./.	./.	./.	./.	1/1:2,0:2:5.82:35,6,0	1/1:1,1:2:5.59:35,6,0	./.
chr10	20751498	.	G	GTA	451.74	PASS	AB=0.943;AC=17;AF=0.531;AN=32;BaseQRankSum=1.052;DP=218;FS=15.334;HRun=0;HaplotypeScore=49.3554;InbreedingCoeff=0.2266;MQ=94.81;MQ0=6;MQRankSum=-0.535;QD=3.61;ReadPosRankSum=-2.410;VQSLOD=0.0297;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	1/1:2,1:3:3:25,3,0	0/0:30,0:12:0.92:0,1,3	0/1:76,0:29:24.94:25,0,66	0/1:5,0:5:32.13:41,0,32	0/0:1,0:1:1.25:0,1,3	./.	1/1:9,0:7:4.86:24,5,0	./.	1/1:1,4:5:12.04:201,12,0	0/1:5,3:8:29.15:88,0,29	./.	0/1:1,0:1:0:0,0,0	./.	0/1:4,0:9:7.35:7,0,50	0/0:7,0:7:21.05:0,21,253	0/0:21,0:21:39.11:0,39,481	0/0:19,0:19:54.10:0,54,650	1/1:2,2:4:6.02:100,6,0	./.	./.	./.	./.	./.	./.	1/1:2,0:2:5.92:38,6,0	1/1:2,0:2:4.72:21,5,0	./.
chr10	20751509	.	TC	T	385.38	PASS	AB=0.756;AC=14;AF=0.368;AN=38;BaseQRankSum=4.813;DP=225;FS=0.000;HRun=1;HaplotypeScore=52.2775;InbreedingCoeff=0.5625;MQ=96.59;MQ0=6;MQRankSum=-1.572;QD=4.10;ReadPosRankSum=-1.321;VQSLOD=-0.3606;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,1:2:2.60:10,3,0	0/0:2,0:2:3.01:0,3,43	0/0:29,0:14:11.73:0,12,153	0/1:62,3:26:34.13:34,0,146	0/0:6,0:6:18.03:0,18,260	1/1:0,1:1:3.01:42,3,0	1/1:0,2:2:3.01:41,3,0	1/1:1,14:13:25.43:233,25,0	./.	0/0:6,0:6:17.84:0,18,172	0/0:7,0:7:14.97:0,15,185	./.	0/0:0,1:1:2.60:0,3,10	0/1:1,4:4:4.51:5,0,5	0/0:9,0:9:23.99:0,24,221	0/0:12,0:12:36.12:0,36,573	0/0:19,0:19:57.15:0,57,861	0/0:21,0:21:63.14:0,63,939	0/0:8,0:8:20.95:0,21,255	./.	./.	./.	./.	./.	./.	1/1:0,2:2:6.02:78,6,0	1/1:0,2:2:6.02:80,6,0	./.
chr10	20751784	.	ACCATATAGAC	A	15821.94	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=14.292;DP=442;FS=17.126;HRun=0;HaplotypeScore=140.8212;InbreedingCoeff=0.9756;MQ=83.98;MQ0=0;MQRankSum=-13.869;QD=65.65;ReadPosRankSum=3.020;VQSLOD=3.3491;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,23:25:60.21:1840,60,0	0/0:6,0:6:18.06:0,18,948	0/0:21,0:21:54.19:0,54,2569	0/0:20,0:20:48.12:0,48,2070	0/0:18,0:18:47.98:0,48,2391	1/1:0,16:16:33.11:1076,33,0	1/1:3,12:15:27.09:880,27,0	1/1:4,20:24:57.15:1595,57,0	1/1:3,16:19:36.12:1173,36,0	0/0:20,0:20:57.20:0,57,2756	0/0:10,0:10:30.10:0,30,1575	1/1:3,13:16:39.13:1270,39,0	1/1:1,16:17:33.11:1076,33,0	1/1:4,9:13:24.08:782,24,0	0/0:35,0:35:99:0,102,4833	0/0:23,0:23:69.24:0,69,3294	0/0:18,0:18:51.18:0,51,2684	0/0:14,0:14:39.13:0,39,2052	0/0:16,0:16:45.13:0,45,1995	1/1:0,5:5:15.01:351,15,0	1/1:3,12:15:24.04:705,24,0	1/1:2,9:11:24.08:783,24,0	1/1:0,8:8:24.08:783,24,0	1/1:7,16:23:30.10:976,30,0	1/1:1,3:4:6.02:196,6,0	1/1:0,9:9:27.05:772,27,0	1/1:3,13:16:36.12:1174,36,0	1/1:0,5:5:12.04:391,12,0
chr10	20751943	.	T	TTGTGTGTGTGTG	6300.05	PASS	AB=0.836;AC=39;AF=0.696;AN=56;BaseQRankSum=-1.097;DP=622;FS=4.545;HRun=0;HaplotypeScore=240.5970;InbreedingCoeff=0.5499;MQ=50.72;MQ0=10;MQRankSum=-5.859;QD=13.02;ReadPosRankSum=-4.984;VQSLOD=2.5628;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:34,0:34:10.18:159,10,0	0/0:4,0:8:12.04:0,12,174	0/1:23,0:11:11.18:11,0,85	0/1:10,0:5:0:0,0,0	0/0:11,0:22:26.10:0,26,600	1/1:12,0:17:10.28:370,10,0	1/1:26,0:29:5.08:239,5,0	1/1:25,0:23:15.05:510,15,0	1/1:11,0:11:3.01:118,3,0	0/1:18,0:38:99:192,0,501	0/0:11,0:19:17.38:0,17,356	1/1:13,1:15:9.03:419,9,0	1/1:15,2:21:12.04:369,12,0	1/1:10,1:12:5.26:278,5,0	1/1:13,0:33:14.79:190,15,0	0/0:20,0:22:36.12:0,36,1225	0/0:34,0:39:69.24:0,69,2183	0/0:26,0:27:44.95:0,45,1282	0/1:15,0:18:9.25:9,0,181	1/1:19,2:24:8.17:290,8,0	1/1:21,0:22:9.89:278,10,0	1/1:29,5:35:13.44:553,13,0	1/1:13,0:17:9.06:334,9,0	0/1:15,5:24:0:1,0,0	1/1:13,2:16:10.97:499,11,0	1/1:21,4:27:23.87:970,24,0	1/1:14,2:19:5.72:277,6,0	1/1:8,1:8:6.02:234,6,0
chr10	20752096	.	AAGTGACATGTGT	A	1501.31	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.153;DP=648;FS=0.000;HRun=0;HaplotypeScore=199.2083;InbreedingCoeff=0.9834;MQ=83.71;MQ0=0;MQRankSum=-5.854;QD=75.07;ReadPosRankSum=1.167;VQSLOD=3.1303;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:90.31:0,90,5152	0/0:13,0:13:39.13:0,39,2401	0/0:19,0:19:52.92:0,53,2714	0/0:24,0:24:66.23:0,66,3195	0/0:21,0:21:63.22:0,63,3629	0/0:25,0:25:51.18:0,51,3159	0/0:18,0:18:54.19:0,54,3203	0/0:22,0:22:60.17:0,60,3229	0/0:13,0:13:33.11:0,33,1969	0/0:27,0:27:78.26:0,78,4399	0/0:15,0:15:39.13:0,39,2189	0/0:18,0:18:39.56:0,40,2234	0/0:20,0:20:54.17:0,54,3149	0/0:23,0:23:45.15:0,45,2520	1/1:6,14:20:42.14:1596,42,0	0/0:34,0:34:93.32:0,93,5402	0/0:44,0:44:99:0,132,8059	0/0:19,0:19:57.20:0,57,3382	0/0:17,0:17:48.16:0,48,2587	0/0:14,0:14:36.12:0,36,2156	0/0:38,0:37:84.25:0,84,4439	0/0:15,0:15:42.14:0,42,2550	0/0:18,0:18:30.10:0,30,1834	0/0:40,0:40:84.27:0,84,4945	0/0:23,0:23:54.19:0,54,3251	0/0:26,0:26:75.26:0,75,4474	0/0:28,0:28:51.10:0,51,2475	0/0:9,0:9:15.05:0,15,930
chr10	20752172	.	A	AATTCCCCTTTTAGCACCCC	45292.14	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=0.946;DP=664;FS=10.456;HRun=0;HaplotypeScore=246.6814;InbreedingCoeff=0.9573;MQ=83.10;MQ0=0;MQRankSum=-15.427;QD=103.64;ReadPosRankSum=0.365;VQSLOD=2.8728;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,11:38:27.09:2352,27,0	0/0:15,0:15:44.84:0,45,1768	0/0:21,0:21:59.95:0,60,1208	0/0:30,0:30:66.34:0,66,1639	0/0:16,0:16:44.07:0,44,1432	1/1:6,8:24:23.63:2188,24,0	1/1:28,0:28:68.46:2801,68,0	1/1:37,0:37:97.49:5106,97,0	1/1:4,8:18:36.12:3231,36,0	0/0:24,0:24:72.19:0,72,3186	0/0:8,0:8:20.19:0,20,1035	1/1:11,14:29:48.45:4160,48,0	1/1:12,5:24:38.96:2610,39,0	1/1:15,13:33:60.10:4279,60,0	1/1:18,0:24:10.07:3375,10,0	0/0:25,0:25:75.21:0,75,3109	0/0:45,0:45:99:0,132,5615	0/0:18,0:18:54.17:0,54,2579	0/0:25,0:25:72.09:0,72,1968	1/1:8,5:18:27.01:2184,27,0	1/1:7,8:27:20.99:813,21,0	1/1:6,10:17:21.07:1939,21,0	1/1:6,7:18:11.99:675,12,0	1/1:4,6:25:15:818,15,0	1/1:4,5:14:21.07:1697,21,0	1/1:18,8:34:85.20:4389,85,0	1/1:7,6:22:30.12:2397,30,0	1/1:0,5:7:3.01:278,3,0
chr10	20752189	.	CAG	C	541.28	PASS	AB=0.883;AC=5;AF=0.089;AN=56;BaseQRankSum=6.250;DP=587;FS=2.811;HRun=0;HaplotypeScore=134.2046;InbreedingCoeff=-0.1009;MQ=78.86;MQ0=0;MQRankSum=-3.907;QD=4.23;ReadPosRankSum=-3.504;VQSLOD=1.8531;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:20.37:0,20,1245	0/0:13,0:13:39.13:0,39,793	0/0:20,0:20:34.60:0,35,1020	0/0:21,0:21:62.58:0,63,1106	0/0:12,0:12:36.12:0,36,707	0/0:16,0:16:34.34:0,34,601	0/1:17,4:21:84.95:85,0,969	0/1:19,10:29:99:319,0,844	0/0:19,0:19:51.17:0,51,886	0/0:26,0:26:78.27:0,78,1584	0/0:14,0:14:39.13:0,39,767	0/0:23,0:23:57.19:0,57,1031	0/0:21,0:21:48.15:0,48,914	0/0:29,0:29:78.27:0,78,1455	0/1:20,5:25:99:174,0,860	0/0:31,0:31:93.28:0,93,1814	0/0:43,0:43:99:0,129,2580	0/0:22,0:22:66.23:0,66,1320	0/0:21,0:21:63.22:0,63,1269	0/0:15,0:15:39.13:0,39,741	0/1:20,0:20:64.60:65,0,506	0/0:17,0:17:20.92:0,21,650	0/0:15,0:15:33.11:0,33,638	0/0:14,0:14:15.05:0,15,270	0/0:12,0:12:33.11:0,33,609	0/1:33,0:33:15.53:16,0,1608	0/0:19,0:19:48.16:0,48,910	0/0:5,0:5:9.03:0,9,164
chr10	20753393	.	TA	T	700.75	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.856;DP=669;FS=1.607;HRun=7;HaplotypeScore=63.0672;InbreedingCoeff=0.9698;MQ=74.60;MQ0=0;MQRankSum=-1.508;QD=23.36;ReadPosRankSum=1.421;VQSLOD=3.9029;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:61,0:61:99:0,178,2169	0/0:15,0:15:45.14:0,45,566	0/0:14,0:13:33.51:0,34,387	0/0:15,0:15:36.08:0,36,423	0/0:20,0:20:45.12:0,45,541	0/0:17,0:17:45.13:0,45,553	0/0:31,0:31:84.27:0,84,1056	0/0:26,0:26:75.23:0,75,932	0/0:23,0:23:66.19:0,66,804	0/0:26,0:26:66.20:0,66,812	0/0:18,0:18:54.17:0,54,679	0/0:21,0:21:57.17:0,57,706	0/0:23,0:23:66.21:0,66,830	0/0:31,0:31:87.26:0,87,1068	1/1:3,27:30:78.05:796,78,0	0/0:33,0:33:87.28:0,87,1094	0/0:39,0:39:99:0,114,1423	0/0:31,0:31:90.20:0,90,1085	0/0:27,0:27:66.15:0,66,787	0/0:15,0:15:42.12:0,42,510	0/0:22,0:22:66.19:0,66,805	0/0:16,0:16:39.12:0,39,490	0/0:15,0:15:39.12:0,39,490	0/0:24,0:24:63.15:0,63,761	0/0:17,0:17:51.16:0,51,642	0/0:22,0:22:57.18:0,57,717	0/0:33,0:33:90.29:0,90,1132	0/0:4,0:4:12.04:0,12,151
chr10	20754266	.	A	AGG	2840.38	PASS	AB=0.926;AC=34;AF=0.607;AN=56;BaseQRankSum=-0.317;DP=350;FS=4.324;HRun=1;HaplotypeScore=70.5545;InbreedingCoeff=0.4916;MQ=45.90;MQ0=24;MQRankSum=-4.797;QD=10.52;ReadPosRankSum=1.089;VQSLOD=0.7213;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:16:20.95:282,21,0	0/0:5,0:5:9.03:0,9,119	0/1:34,0:4:7.66:8,0,91	0/1:37,0:5:12.36:12,0,48	0/0:11,0:7:8.96:0,9,86	0/1:6,11:17:1.95:46,0,2	1/1:16,1:15:29.99:379,30,0	1/1:5,8:11:29.91:329,30,0	1/1:9,1:10:17.76:197,18,0	0/1:7,0:5:0:0,0,0	0/0:12,0:9:11.95:0,12,126	1/1:3,7:8:3.01:54,3,0	1/1:12,0:11:21.02:261,21,0	1/1:8,0:8:12.04:163,12,0	0/0:8,0:8:6.91:0,7,84	0/0:5,0:5:12.04:0,12,177	0/0:12,0:13:18.06:0,18,262	0/0:17,0:17:33.11:0,33,467	0/0:7,0:6:11.82:0,12,101	1/1:5,0:5:6.02:72,6,0	1/1:12,0:12:15.24:183,15,0	1/1:2,4:6:5.98:58,6,0	1/1:4,0:4:5.92:71,6,0	0/1:8,0:7:15.23:129,0,15	1/1:11,0:11:7.42:160,7,0	0/1:17,1:18:17.93:308,0,18	1/1:10,0:10:6.86:157,7,0	1/1:15,0:12:6.14:159,6,0
chr10	20754347	.	AT	A	2752.43	PASS	AB=0.810;AC=36;AF=0.643;AN=56;BaseQRankSum=5.584;DP=356;FS=1.015;HRun=14;HaplotypeScore=62.2925;InbreedingCoeff=0.5304;MQ=69.54;MQ0=1;MQRankSum=-3.045;QD=10.51;ReadPosRankSum=0.773;VQSLOD=3.2528;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,17:24:46.55:313,47,0	0/0:2,0:2:5.97:0,6,48	0/1:18,0:10:0.35:0,0,8	0/0:13,0:8:1.70:0,2,4	0/0:9,1:12:6.12:0,6,174	0/1:6,15:21:2.12:275,0,2	1/1:4,11:13:4.89:178,5,0	1/1:11,10:24:31.70:211,32,0	1/1:3,15:18:47.53:326,48,0	0/1:11,1:12:2.61:3,0,110	0/0:10,1:13:9.27:0,9,209	1/1:1,7:8:20.81:144,21,0	1/1:2,8:10:20.79:144,21,0	1/1:4,9:14:15.41:192,15,0	0/0:6,0:13:25.77:0,26,136	0/1:6,2:8:20.15:20,0,115	0/0:21,1:25:45.32:0,45,547	0/0:16,0:16:45:0,45,407	0/1:9,1:10:2.55:3,0,121	0/1:5,6:11:4.91:119,0,5	1/1:1,3:3:2.98:21,3,0	1/1:2,2:4:5.94:41,6,0	1/1:0,4:4:11.90:82,12,0	1/1:3,4:6:8.87:62,9,0	1/1:2,8:11:25.77:170,26,0	1/1:6,14:22:29.84:315,30,0	1/1:1,13:14:37.71:252,38,0	1/1:0,3:3:8.93:62,9,0
chr10	20754378	.	A	AT	5602.03	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=2.721;DP=382;FS=7.846;HRun=8;HaplotypeScore=60.9954;InbreedingCoeff=0.8723;MQ=74.58;MQ0=3;MQRankSum=-4.635;QD=24.79;ReadPosRankSum=0.002;VQSLOD=5.4201;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,17:24:45.13:519,45,0	1/1:1,0:1:2.98:21,3,0	0/0:33,1:24:16.09:0,16,184	0/0:19,0:13:1.73:0,2,86	0/0:10,0:10:17.04:0,17,142	1/1:5,20:25:57.16:649,57,0	1/1:4,11:13:27.08:311,27,0	1/1:9,9:17:21.06:242,21,0	1/1:6,12:18:40.36:452,40,0	0/0:15,0:15:33:0,33,302	0/0:10,0:10:24.01:0,24,218	1/1:2,9:11:27.07:303,27,0	1/1:4,6:10:21.03:222,21,0	1/1:3,12:15:41.71:457,42,0	1/1:3,9:12:25.57:252,26,0	0/0:12,0:12:32.32:0,32,300	0/0:32,0:32:83.97:0,84,750	0/0:15,0:15:42.02:0,42,384	0/0:7,0:7:15:0,15,137	1/1:1,5:6:18.01:193,18,0	1/1:0,3:2:6.02:69,6,0	1/1:1,1:2:6.01:63,6,0	1/1:1,3:4:6.02:69,6,0	1/1:1,7:7:18.05:208,18,0	1/1:2,7:9:21.06:242,21,0	1/1:7,17:25:38.73:691,39,0	1/1:3,14:17:48.12:536,48,0	1/1:0,3:3:9.03:104,9,0
chr10	20754994	.	CAA	C	18772.50	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=7.246;DP=659;FS=2.941;HRun=6;HaplotypeScore=92.6302;InbreedingCoeff=0.9794;MQ=74.08;MQ0=2;MQRankSum=-3.279;QD=34.13;ReadPosRankSum=1.816;VQSLOD=4.6214;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,30:33:75.24:1001,75,0	1/1:1,6:7:15.05:200,15,0	0/0:12,0:13:32.59:0,33,479	0/0:16,0:15:36.45:0,36,503	1/1:1,11:12:30.10:400,30,0	1/1:2,25:27:63.21:841,63,0	1/1:2,46:48:99:1678,126,0	1/1:2,21:23:60.13:736,60,0	1/1:0,24:24:69.23:920,69,0	1/1:0,26:26:72.18:926,72,0	1/1:0,7:7:21.07:280,21,0	1/1:3,26:29:72.24:961,72,0	1/1:2,31:31:78.25:1040,78,0	1/1:2,28:30:69.23:920,69,0	1/1:1,20:21:60.20:800,60,0	0/0:23,0:23:69.24:0,69,1235	0/0:27,0:27:72.25:0,72,1283	0/0:30,0:30:90.31:0,90,1608	1/1:2,27:29:81.23:1045,81,0	1/1:0,7:7:21.07:280,21,0	1/1:2,76:78:99:2718,205,0	1/1:0,13:13:33.11:440,33,0	1/1:0,5:5:8.84:120,9,0	1/1:2,36:38:99:1321,99,0	1/1:1,8:9:24.08:320,24,0	1/1:0,19:19:57.17:745,57,0	1/1:2,22:24:57.18:760,57,0	1/1:0,8:8:24.08:320,24,0
chr10	20756521	.	C	CTT	9419	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-2.947;DP=478;FS=0.000;HRun=10;HaplotypeScore=64.8044;InbreedingCoeff=0.9393;MQ=70.47;MQ0=2;MQRankSum=-1.861;QD=24.66;ReadPosRankSum=-0.304;VQSLOD=4.2870;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,29:41:68.71:960,69,0	1/1:1,1:7:15.03:160,15,0	0/0:14,0:9:8.93:0,9,89	0/0:20,0:16:20.33:0,20,213	1/1:2,0:16:30.01:286,30,0	1/1:3,16:18:35.67:623,36,0	1/1:1,11:13:27.09:386,27,0	1/1:9,15:26:50.02:620,50,0	1/1:2,9:12:23.67:323,24,0	1/1:2,0:13:30.51:296,31,0	1/1:2,1:14:21.04:222,21,0	1/1:1,1:9:11.36:129,11,0	1/1:2,6:9:15.05:224,15,0	1/1:0,0:13:21.03:200,21,0	1/1:1,13:14:42.14:626,42,0	0/0:8,0:8:24.05:0,24,244	0/0:25,0:26:56.81:0,57,623	0/0:26,0:27:47.96:0,48,632	1/1:5,3:20:49.73:467,50,0	1/1:5,11:18:32.43:341,32,0	1/1:3,7:9:9.03:134,9,0	1/1:2,0:8:8.97:77,9,0	1/1:2,0:15:27.50:257,28,0	1/1:2,3:14:30.04:301,30,0	1/1:3,11:14:27.06:402,27,0	1/1:3,19:22:63.06:828,63,0	1/1:7,18:26:48.09:689,48,0	1/1:6,18:24:63.11:868,63,0
chr10	20757630	.	A	ACATGTGTACCTGTAAGCC	22016.83	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=1.475;DP=661;FS=4.742;HRun=0;HaplotypeScore=310.1562;InbreedingCoeff=0.8942;MQ=75.17;MQ0=0;MQRankSum=-15.666;QD=144.85;ReadPosRankSum=0.631;VQSLOD=4.1536;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,154,7225	1/1:9,3:12:27.09:1731,27,0	0/0:14,0:14:13.04:0,13,1134	0/0:20,0:20:53.48:0,53,1673	1/1:24,9:36:54.19:3294,54,0	0/0:20,0:20:60.19:0,60,2704	0/0:25,0:25:63.22:0,63,2828	0/0:27,0:27:75.26:0,75,3378	0/0:22,0:22:66.23:0,66,3143	1/1:23,14:37:99:6949,99,0	1/1:7,5:12:21.07:1638,21,0	0/0:27,0:27:78.24:0,78,3636	0/0:22,0:22:63.22:0,63,3084	0/0:20,0:20:57.20:0,57,2747	1/1:12,10:25:63.22:4411,63,0	0/0:29,0:29:81.25:0,81,3758	0/0:33,0:33:99:0,99,4971	0/0:25,0:25:75.20:0,75,3313	1/1:9,8:17:48.16:3766,48,0	0/0:28,0:28:75.26:0,75,3695	0/0:34,0:34:96.33:0,96,4489	0/0:14,0:14:30.08:0,30,1182	0/0:11,0:11:33.10:0,33,1433	0/0:25,0:25:75.22:0,75,3572	0/0:15,0:15:45.15:0,45,2201	0/1:12,0:12:99:227,0,1612	0/0:33,0:32:99:0,99,4554	0/0:12,0:12:36.10:0,36,1653
chr10	20757916	.	T	TA	4143.03	PASS	AB=0.955;AC=13;AF=0.232;AN=56;BaseQRankSum=8.210;DP=572;FS=1.218;HRun=8;HaplotypeScore=69.3556;InbreedingCoeff=0.8961;MQ=70.57;MQ0=1;MQRankSum=0.555;QD=25.73;ReadPosRankSum=1.249;VQSLOD=4.4765;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:90.03:0,90,818	1/1:0,16:16:45.05:501,45,0	0/0:27,0:19:10.31:0,10,196	0/1:19,0:11:11.90:12,0,21	1/1:4,28:34:89.93:991,90,0	0/0:15,0:15:39.01:0,39,357	0/0:16,0:16:47.95:0,48,429	0/0:43,0:43:99:0,111,1012	0/0:16,0:16:45.02:0,45,411	1/1:3,27:30:81.23:925,81,0	1/1:1,13:14:36.10:412,36,0	0/0:17,0:17:45.01:0,45,408	0/0:15,0:15:35.97:0,36,321	0/0:13,0:13:38.06:0,38,336	1/1:3,19:21:51.15:589,51,0	0/0:20,0:20:45:0,45,407	0/0:27,0:27:73.56:0,74,656	0/0:21,0:21:54.02:0,54,494	1/1:4,20:24:63.16:713,63,0	0/0:22,0:22:51.01:0,51,467	0/0:9,0:9:27.01:0,27,247	0/0:7,0:7:18:0,18,165	0/0:13,0:13:33.01:0,33,302	0/0:9,0:9:27.01:0,27,247	0/0:21,0:21:60.03:0,60,549	0/0:26,1:27:28.40:0,28,511	0/0:23,0:23:60.02:0,60,549	0/0:15,0:15:45.02:0,45,411
chr10	20758467	.	TAAAGAAAAGA	T	8829.24	PASS	AB=0.967;AC=13;AF=0.232;AN=56;BaseQRankSum=14.480;DP=664;FS=13.886;HRun=0;HaplotypeScore=215.8967;InbreedingCoeff=0.9053;MQ=79.23;MQ0=0;MQRankSum=-14.450;QD=56.24;ReadPosRankSum=2.190;VQSLOD=3.4547;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:93.32:0,93,4773	1/1:1,11:12:33.11:1087,33,0	0/0:20,0:20:51.17:0,51,1909	0/0:22,0:22:54.13:0,54,1795	1/1:6,29:35:81.28:2565,81,0	0/0:22,0:22:60.21:0,60,3127	0/0:15,0:15:45.15:0,45,2270	0/0:34,0:34:96.32:0,96,4748	0/0:16,0:16:48.16:0,48,2511	1/1:8,16:24:45.14:1410,45,0	1/1:2,13:15:24.08:790,24,0	0/0:33,0:33:96.33:0,96,4960	0/0:19,0:19:54.19:0,54,2544	0/0:32,0:32:81.26:0,81,3911	1/1:4,20:24:57.20:1878,57,0	0/0:12,0:12:36.12:0,36,1901	0/0:30,0:30:90.27:0,90,3947	0/0:40,0:40:99:0,117,5778	1/1:7,11:18:33.11:1088,33,0	0/0:29,0:29:84.27:0,84,3987	0/0:14,0:14:42.14:0,42,2182	0/0:17,0:17:48.16:0,48,2335	0/0:30,0:30:90.31:0,90,4694	0/0:24,0:24:69.19:0,69,3509	0/0:34,0:34:96.29:0,96,4743	0/1:28,1:29:11.56:12,0,4054	0/0:22,0:21:63.22:0,63,3115	0/0:9,0:9:27.09:0,27,1433
chr10	20759362	.	CAT	C	6011.77	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=14.699;DP=710;FS=4.776;HRun=0;HaplotypeScore=89.1535;InbreedingCoeff=0.9883;MQ=77.68;MQ0=1;MQRankSum=1.109;QD=43.88;ReadPosRankSum=0.411;VQSLOD=6.2114;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:57:99:0,169,3232	1/1:1,14:15:45.15:685,45,0	0/0:15,0:15:39.13:0,39,716	0/0:15,0:15:39.13:0,39,666	1/1:0,25:25:72.24:1103,72,0	0/0:28,0:28:81.28:0,81,1565	0/0:28,0:28:84.29:0,84,1623	0/0:26,0:26:78.26:0,78,1474	0/0:22,0:22:66.23:0,66,1274	1/1:0,26:26:78.26:1195,78,0	1/1:1,18:19:51.17:781,51,0	0/0:28,0:28:84.27:0,84,1590	0/0:19,0:19:57.20:0,57,1100	0/0:14,0:14:42.14:0,42,797	1/1:1,30:31:84.29:1286,84,0	0/0:20,0:20:57.20:0,57,1101	0/0:45,0:45:99:0,135,2572	0/0:20,0:19:57.20:0,57,1101	1/1:0,21:21:63.21:962,63,0	0/0:27,0:27:81.28:0,81,1564	0/0:33,0:33:96.33:0,96,1846	0/0:38,0:38:99:0,105,1996	0/0:23,0:23:69.22:0,69,1283	0/0:32,0:32:96.33:0,96,1844	0/0:29,0:29:84.27:0,84,1578	0/0:20,0:20:60.21:0,60,1149	0/0:31,0:30:93.32:0,93,1795	0/0:3,0:3:9.03:0,9,174
chr10	20759474	.	AGT	A	16568.35	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=9.888;DP=673;FS=4.090;HRun=0;HaplotypeScore=86.0938;InbreedingCoeff=0.9752;MQ=78.74;MQ0=6;MQRankSum=-6.147;QD=30.63;ReadPosRankSum=1.441;VQSLOD=6.3844;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,53:55:99:1794,138,0	1/1:1,4:5:9.03:117,9,0	0/0:31,0:29:49.58:0,50,994	0/0:23,0:21:33.09:0,33,516	1/1:2,25:25:60.19:776,60,0	1/1:1,22:23:66:831,66,0	1/1:6,22:28:48.16:624,48,0	1/1:7,23:30:72.20:894,72,0	1/1:2,29:30:75.24:975,75,0	1/1:5,27:32:81.19:1002,81,0	1/1:0,16:16:42.14:544,42,0	1/1:3,22:24:57.18:739,57,0	1/1:2,19:21:48.16:624,48,0	1/1:4,17:21:51.17:663,51,0	1/1:2,25:27:12.18:729,12,0	0/0:26,0:26:75.23:0,75,1243	0/0:27,0:26:78.27:0,78,1326	0/0:25,0:25:69.24:0,69,1167	1/1:4,14:18:42.14:546,42,0	1/1:1,16:17:45.15:585,45,0	1/1:3,30:33:84.27:1092,84,0	1/1:4,17:21:47.99:599,48,0	1/1:2,7:9:15.05:195,15,0	1/1:1,31:32:90.29:1170,90,0	1/1:1,17:17:42.14:546,42,0	1/1:4,19:23:60.19:780,60,0	1/1:4,14:18:36.12:468,36,0	1/1:1,9:10:21.07:273,21,0
chr10	20759779	.	G	GC	824.79	PASS	AB=1.000;AC=34;AF=0.680;AN=50;BaseQRankSum=6.116;DP=263;FS=10.680;HRun=0;HaplotypeScore=52.5170;InbreedingCoeff=0.4969;MQ=88.93;MQ0=1;MQRankSum=-4.637;QD=8.42;ReadPosRankSum=-6.298;VQSLOD=0.5726;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:9,0:9:1.03:98,0,1	1/1:0,1:1:3.01:38,3,0	0/0:26,0:25:59.26:0,59,890	0/0:30,0:26:72.15:0,72,881	0/0:7,0:7:0.89:0,1,2	1/1:4,0:4:0.73:3,1,0	1/1:5,0:5:2.94:18,3,0	1/1:5,0:5:2.63:35,3,0	1/1:9,0:9:6.50:81,6,0	1/1:6,3:9:17.85:191,18,0	1/1:4,0:4:2.50:24,2,0	1/1:7,0:7:3.03:110,3,0	1/1:4,0:4:0.83:21,1,0	1/1:4,0:4:2.50:24,2,0	1/1:9,0:9:3.74:33,4,0	0/0:30,0:30:90.30:0,90,1257	0/0:36,0:36:99:0,108,1510	0/0:29,0:29:87.29:0,87,1216	1/1:4,0:4:4.36:30,4,0	./.	1/1:6,0:6:2.98:35,3,0	0/1:2,0:2:0:0,0,0	./.	./.	0/0:3,0:3:0.47:0,0,1	1/1:2,0:2:5.92:39,6,0	1/1:11,0:11:16.23:120,16,0	1/1:3,0:3:8.98:72,9,0
chr10	20759783	.	GTGTGTGT	G	395.17	PASS	AC=14;AF=0.583;AN=24;BaseQRankSum=5.254;DP=172;FS=6.958;HRun=0;HaplotypeScore=96.9024;InbreedingCoeff=0.6899;MQ=103.90;MQ0=1;MQRankSum=-5.151;QD=30.40;ReadPosRankSum=1.489;VQSLOD=2.3206;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,0:1:2.96:19,3,0	1/1:1,0:1:3.01:61,3,0	0/0:31,0:29:84.29:0,84,2801	0/0:30,0:26:76.33:0,76,2687	./.	./.	./.	./.	1/1:1,0:2:4.21:23,4,0	1/1:3,1:4:12.04:214,12,0	./.	1/1:1,0:2:3.01:52,3,0	./.	./.	1/1:0,2:2:6.02:138,6,0	0/0:29,0:29:84.29:0,84,3308	0/0:36,0:36:99:0,108,4220	0/0:29,0:29:87.30:0,87,3544	./.	./.	./.	./.	./.	./.	./.	./.	1/1:1,0:1:0.47:1,0,0	./.
chr10	20760628	.	C	CT	850.92	PASS	AB=0.919;AC=15;AF=0.268;AN=56;BaseQRankSum=2.401;DP=469;FS=10.287;HRun=11;HaplotypeScore=67.3655;InbreedingCoeff=0.5194;MQ=60.49;MQ0=4;MQRankSum=-1.213;QD=4.83;ReadPosRankSum=-3.592;VQSLOD=-0.0136;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:19:31.86:0,32,238	1/1:3,3:6:15.03:150,15,0	0/1:25,0:11:3.23:3,0,23	0/0:17,0:5:4.30:0,4,27	1/1:17,9:24:16.63:292,17,0	0/0:24,0:24:37.02:0,37,281	0/1:9,1:10:9.53:10,0,118	0/0:25,0:24:56.76:0,57,438	0/0:15,0:15:15.57:0,16,235	1/1:8,9:16:20.91:210,21,0	1/1:9,0:10:9.27:65,9,0	0/0:14,0:14:14.88:0,15,116	0/0:13,0:13:14.85:0,15,116	0/0:10,0:10:14.29:0,14,101	1/1:19,0:19:15.87:75,16,0	0/0:18,0:18:20.76:0,21,159	0/0:27,0:28:58.51:0,59,430	0/1:27,3:30:13.12:13,0,277	0/1:17,3:20:9.57:190,0,10	0/0:13,0:13:20.70:0,21,162	0/1:9,1:10:21.53:22,0,37	0/0:7,0:8:13.75:0,14,96	0/0:5,0:5:5.95:0,6,46	0/0:11,0:11:14.93:0,15,116	0/0:15,0:14:37.90:0,38,284	0/0:16,0:16:22.47:0,22,154	0/0:21,0:21:38.79:0,39,301	0/0:20,0:20:32.40:0,32,239
chr10	20760640	.	C	CT	679.21	PASS	AB=0.803;AC=12;AF=0.214;AN=56;BaseQRankSum=2.619;DP=450;FS=11.723;HRun=11;HaplotypeScore=47.6868;InbreedingCoeff=0.7006;MQ=58.68;MQ0=7;MQRankSum=-1.747;QD=5.71;ReadPosRankSum=-1.118;VQSLOD=0.1519;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:19:47.81:0,48,370	1/1:2,3:5:9.02:90,9,0	0/1:36,1:10:2.73:3,0,16	0/0:23,0:7:0.80:0,1,11	0/1:10,13:22:3.46:117,0,3	0/0:26,0:26:53.77:0,54,415	0/0:9,0:9:20.69:0,21,148	0/0:26,0:23:32.76:0,33,249	0/0:16,0:16:38.77:0,39,299	1/1:12,2:13:24.02:231,24,0	1/1:2,4:6:5.93:47,6,0	0/0:11,0:11:20.89:0,21,160	0/0:11,0:11:29.76:0,30,223	0/0:8,0:8:8.90:0,9,64	1/1:4,10:13:12.02:121,12,0	0/0:13,0:13:29.87:0,30,230	0/0:31,0:31:59.61:0,60,452	0/0:27,0:28:43.53:0,44,414	1/1:9,9:19:14.52:235,15,0	0/0:15,0:15:32.78:0,33,253	0/0:8,0:8:20.83:0,21,152	0/0:5,0:5:2.98:0,3,23	0/0:3,0:3:8.96:0,9,68	0/0:9,0:9:5.96:0,6,46	0/0:16,0:15:32.83:0,33,255	0/0:17,0:17:35.53:0,36,265	0/0:18,0:17:46.85:0,47,353	0/0:17,0:17:44.77:0,45,343
chr10	20760879	.	C	CTTAA	7851.91	PASS	AB=1.000;AC=47;AF=0.839;AN=56;BaseQRankSum=4.358;DP=360;FS=3.670;HRun=0;HaplotypeScore=85.2471;InbreedingCoeff=0.8368;MQ=60.02;MQ0=7;MQRankSum=-6.943;QD=27.94;ReadPosRankSum=-0.857;VQSLOD=4.3304;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:26,1:25:48.09:661,48,0	1/1:4,3:7:12.03:219,12,0	0/1:10,0:8:0.46:0,0,154	0/0:10,0:9:10.02:0,10,309	1/1:4,12:16:33.07:539,33,0	1/1:11,1:9:24.06:341,24,0	1/1:18,2:20:42.55:589,43,0	1/1:10,0:10:27.06:414,27,0	1/1:11,1:11:12.51:211,13,0	1/1:2,3:5:12.04:232,12,0	1/1:3,5:8:15.05:254,15,0	1/1:6,0:6:12.01:144,12,0	1/1:5,0:5:9.01:100,9,0	1/1:12,0:12:21.05:285,21,0	1/1:3,0:8:8.51:98,9,0	0/0:7,0:7:14.56:0,15,258	0/0:31,0:35:78.22:0,78,1341	0/0:20,0:25:69.22:0,69,1150	1/1:4,8:14:39.09:681,39,0	1/1:12,0:12:33.07:412,33,0	1/1:12,0:11:17.94:184,18,0	1/1:7,1:8:15.05:222,15,0	1/1:3,0:3:9.01:105,9,0	1/1:18,0:18:33.11:448,33,0	1/1:17,0:17:27:362,27,0	1/1:12,4:15:45.15:736,45,0	1/1:12,1:12:18.04:292,18,0	1/1:7,2:9:21.05:324,21,0
chr10	20760880	.	T	TTAA	8846.96	PASS	AB=1.000;AC=47;AF=0.839;AN=56;BaseQRankSum=3.792;DP=380;FS=1.958;HRun=0;HaplotypeScore=82.9006;InbreedingCoeff=0.8329;MQ=58.24;MQ0=10;MQRankSum=-6.475;QD=29.49;ReadPosRankSum=-1.228;VQSLOD=4.8260;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,17:26:48.12:803,48,0	1/1:6,0:6:11.90:144,12,0	0/1:10,0:8:2.56:3,0,165	0/0:11,0:9:23.72:0,24,317	1/1:17,0:16:15.55:384,16,0	1/1:4,8:9:24.08:427,24,0	1/1:8,11:20:45.47:767,45,0	1/1:14,0:14:39.10:624,39,0	1/1:4,8:10:12.51:221,13,0	1/1:6,0:5:11.97:182,12,0	1/1:8,0:8:14.81:179,15,0	1/1:3,4:8:14.91:213,15,0	1/1:5,1:4:9.03:134,9,0	1/1:5,10:14:24.04:401,24,0	1/1:7,0:7:8.38:69,8,0	0/0:8,0:8:14.74:0,15,243	0/0:34,0:34:78.25:0,78,1268	0/0:27,0:26:69.20:0,69,1060	1/1:15,0:14:32.84:521,33,0	1/1:4,10:14:36.11:545,36,0	1/1:5,6:10:18.04:246,18,0	1/1:3,7:9:15.02:257,15,0	1/1:2,1:3:9.03:147,9,0	1/1:1,17:19:33.55:645,34,0	1/1:5,13:18:27.01:427,27,0	1/1:6,11:15:45.15:809,45,0	1/1:4,8:12:17.87:341,18,0	1/1:4,6:9:21.07:358,21,0
chr10	20760881	.	T	TAA	6047.52	PASS	AB=0.986;AC=44;AF=0.786;AN=56;BaseQRankSum=5.494;DP=366;FS=1.186;HRun=0;HaplotypeScore=85.2556;InbreedingCoeff=0.5700;MQ=58.18;MQ0=11;MQRankSum=-6.303;QD=21.15;ReadPosRankSum=1.230;VQSLOD=4.8861;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:23,4:24:48.02:597,48,0	1/1:5,0:5:6.49:64,6,0	0/1:10,0:8:1.81:2,0,164	0/0:11,0:9:26.75:0,27,347	0/1:16,1:16:20.32:291,0,20	1/1:12,1:9:24.07:283,24,0	1/1:17,3:20:13.09:495,13,0	1/1:5,7:13:39.10:504,39,0	1/1:11,1:10:12.50:136,13,0	1/1:6,0:5:1.03:140,1,0	0/1:8,0:8:4.51:122,0,5	1/1:6,0:6:8.99:97,9,0	1/1:3,3:4:9.03:130,9,0	1/1:14,1:15:22.22:251,22,0	0/1:6,0:6:5.04:26,0,5	0/0:8,0:8:14.80:0,15,231	0/0:34,0:34:81.20:0,81,1213	0/0:27,0:26:72.22:0,72,1079	1/1:14,0:13:16.64:381,17,0	1/1:12,2:14:36.10:452,36,0	1/1:7,2:8:17.27:206,17,0	1/1:11,0:9:14.96:161,15,0	1/1:1,2:3:9.03:114,9,0	1/1:18,0:18:33.44:356,33,0	1/1:15,0:14:20.92:246,21,0	1/1:17,0:15:45.12:531,45,0	1/1:10,0:9:17.75:200,18,0	1/1:9,1:9:21.06:266,21,0
chr10	20761175	.	AGCCAG	A	2094.18	PASS	AB=0.955;AC=11;AF=0.196;AN=56;BaseQRankSum=5.038;DP=590;FS=0.624;HRun=0;HaplotypeScore=159.3949;InbreedingCoeff=0.8889;MQ=84.39;MQ0=0;MQRankSum=-3.592;QD=28.69;ReadPosRankSum=0.649;VQSLOD=3.3114;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:72.25:0,72,2091	1/1:0,7:7:18.06:383,18,0	0/0:19,0:19:45.15:0,45,1137	0/0:29,0:30:78.27:0,78,2301	1/1:0,19:19:24.08:511,24,0	0/0:15,0:15:33.11:0,33,936	0/0:47,0:47:99:0,111,3316	0/0:20,0:20:57.20:0,57,1759	0/0:24,0:24:57.20:0,57,1659	1/1:0,14:14:42.14:892,42,0	1/1:0,5:5:9.03:192,9,0	0/0:25,0:25:72.25:0,72,2155	0/0:20,0:20:48.16:0,48,1418	0/0:24,0:24:66.23:0,66,1902	0/0:22,0:22:66.23:0,66,2052	0/0:22,0:22:66.23:0,66,2021	0/0:38,0:38:99:0,114,3451	0/0:33,0:33:90.31:0,90,2816	1/1:2,5:7:15.05:282,15,0	0/0:15,0:15:36.12:0,36,1085	0/0:38,0:38:90.27:0,90,2630	0/0:14,0:13:27.05:0,27,768	0/0:12,0:12:18.06:0,18,536	0/0:35,0:35:41.69:0,42,2207	0/0:11,0:11:18.06:0,18,542	0/1:20,1:21:3.76:4,0,1662	0/0:20,0:20:47.91:0,48,1382	0/0:5,0:5:12.04:0,12,375
chr10	20761225	.	G	GTGCTTCCA	38144.50	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-11.351;DP=693;FS=2.599;HRun=0;HaplotypeScore=163.4947;InbreedingCoeff=0.9954;MQ=85.62;MQ0=0;MQRankSum=-17.431;QD=87.89;ReadPosRankSum=-0.184;VQSLOD=4.8569;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,22:38:84.29:3357,84,0	0/0:13,0:13:30.10:0,30,804	0/0:32,0:32:90.31:0,90,2359	0/0:29,0:29:66.20:0,66,1696	0/0:32,0:32:84.18:0,84,2217	1/1:2,7:12:27.05:1061,27,0	1/1:12,21:39:90.31:3708,90,0	1/1:10,6:21:57.18:1646,57,0	1/1:10,17:31:75.26:3107,75,0	0/0:25,0:25:72.25:0,72,1995	0/0:7,0:7:18.06:0,18,434	1/1:7,21:34:75.26:3042,75,0	1/1:8,27:39:96.33:3957,96,0	1/1:7,21:32:78.27:3261,78,0	0/0:23,0:23:63.22:0,63,1753	0/0:25,0:25:69.22:0,69,1842	0/0:21,0:21:63.22:0,63,1743	0/0:26,0:26:75.26:0,75,2041	0/0:26,0:26:72.23:0,72,1882	1/1:1,13:15:45.15:1765,45,0	1/1:17,14:37:57.15:1865,57,0	1/1:4,14:19:45.11:1598,45,0	1/1:2,8:14:30.06:1109,30,0	1/1:11,17:29:42.57:1660,43,0	1/1:4,8:14:27.05:1018,27,0	1/1:9,23:35:20.34:3873,20,0	1/1:3,11:15:33.11:1457,33,0	1/1:0,5:7:15.05:663,15,0
chr10	20761410	.	A	AAGG	19342.47	PASS	AB=0.967;AC=35;AF=0.625;AN=56;BaseQRankSum=-13.723;DP=715;FS=0.000;HRun=0;HaplotypeScore=99.0037;InbreedingCoeff=0.9481;MQ=77.25;MQ0=0;MQRankSum=-2.598;QD=42.23;ReadPosRankSum=1.317;VQSLOD=6.1366;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,30:39:84.29:1656,84,0	0/0:15,0:15:33.11:0,33,488	0/0:38,0:38:49.31:0,49,1041	0/0:33,0:33:51.17:0,51,721	0/0:22,0:22:36.12:0,36,534	1/1:2,12:14:42.14:825,42,0	1/1:4,21:25:57.20:1180,57,0	1/1:14,18:35:81.24:1492,81,0	1/1:6,24:30:72.25:1492,72,0	0/0:16,0:16:42.14:0,42,623	0/0:17,0:17:45.11:0,45,643	1/1:10,21:32:66.18:1308,66,0	1/1:5,15:21:45.15:930,45,0	1/1:8,17:25:51.18:1061,51,0	0/0:30,0:30:84.25:0,84,1190	0/1:28,1:29:2.36:2,0,786	0/0:44,0:44:99:0,126,1825	0/0:23,0:23:60.18:0,60,868	0/0:19,0:19:42.11:0,42,567	1/1:6,23:29:72.25:1436,72,0	1/1:9,31:42:84.29:1714,84,0	1/1:3,13:17:39.09:678,39,0	1/1:2,9:11:18.06:328,18,0	1/1:8,39:49:99:2423,117,0	1/1:3,7:10:21.07:438,21,0	1/1:5,14:19:48.16:969,48,0	1/1:2,18:23:54.19:1107,54,0	1/1:3,5:8:15.05:305,15,0
chr10	20761845	.	C	CT	1682.10	PASS	AB=0.750;AC=10;AF=0.179;AN=56;BaseQRankSum=-7.751;DP=618;FS=6.829;HRun=11;HaplotypeScore=71.6080;InbreedingCoeff=0.7522;MQ=75.90;MQ0=0;MQRankSum=1.993;QD=14.02;ReadPosRankSum=-0.058;VQSLOD=3.6913;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:79.70:0,80,609	1/1:3,8:11:0.81:190,1,0	0/0:28,0:21:24.90:0,25,168	0/0:31,0:22:14.89:0,15,118	1/1:6,23:29:23.17:583,23,0	0/0:26,2:29:43.28:0,43,506	0/0:20,0:21:46.22:0,46,339	0/0:26,1:27:20.32:0,20,340	0/0:32,0:32:92.63:0,93,717	0/1:11,21:33:0.02:490,0,0	1/1:0,10:10:20.95:191,21,0	0/1:15,2:18:23.01:23,0,198	0/0:20,0:20:53.77:0,54,414	0/0:16,0:16:40.88:0,41,308	0/0:25,2:28:40.27:0,40,479	0/0:17,0:16:44.80:0,45,346	0/0:18,1:20:19.40:0,19,321	0/0:22,0:23:61.80:0,62,470	1/1:4,13:19:17.69:363,18,0	0/0:19,0:19:46.58:0,47,343	0/0:10,0:10:20.89:0,21,163	0/0:14,0:14:35.84:0,36,278	0/0:21,0:21:59.76:0,60,462	0/0:19,1:20:25.34:0,25,362	0/0:27,0:28:76.75:0,77,586	0/0:23,0:23:52.02:0,52,398	0/0:23,0:24:65.57:0,66,488	0/0:15,0:15:26.87:0,27,209
chr10	20763104	.	CGCAAGCGA	C	4321.28	PASS	AB=1.000;AC=25;AF=0.481;AN=52;BaseQRankSum=6.172;DP=411;FS=0.574;HRun=0;HaplotypeScore=128.2808;InbreedingCoeff=0.6515;MQ=66.94;MQ0=11;MQRankSum=-7.660;QD=20.78;ReadPosRankSum=2.859;VQSLOD=4.2818;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:15:3.01:62,3,0	0/0:10,0:10:24.08:0,24,593	0/0:26,0:15:32.63:0,33,786	0/1:32,0:18:17.64:18,0,752	0/0:12,0:12:27.09:0,27,1048	1/1:10,1:11:21.07:546,21,0	1/1:22,0:22:5.20:152,5,0	1/1:20,0:20:42.06:941,42,0	1/1:10,0:10:6.02:145,6,0	0/0:11,0:11:30.10:0,30,1065	0/0:8,0:6:12.04:0,12,431	1/1:13,1:13:11.93:316,12,0	1/1:11,0:11:18.53:503,19,0	1/1:9,0:9:6.02:169,6,0	0/0:10,0:10:21.07:0,21,404	0/0:19,0:17:48.16:0,48,1875	0/0:28,0:27:54.19:0,54,1987	0/0:28,0:25:72.25:0,72,2863	0/0:16,0:16:27.06:0,27,791	1/1:9,1:9:3.08:85,3,0	0/0:8,1:8:3.01:0,3,109	0/0:11,0:11:0.47:0,0,1	./.	./.	0/1:10,0:10:0:0,0,0	0/1:17,0:16:46.84:679,0,47	1/1:14,0:13:15.05:368,15,0	1/1:11,0:9:12.04:337,12,0
chr10	20763106	.	CAAGCGA	C	3428.80	PASS	AB=0.718;AC=25;AF=0.481;AN=52;BaseQRankSum=8.001;DP=377;FS=0.559;HRun=0;HaplotypeScore=119.4162;InbreedingCoeff=0.6487;MQ=76.00;MQ0=4;MQRankSum=-7.082;QD=18.05;ReadPosRankSum=3.038;VQSLOD=3.2007;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,10:11:2.72:76,3,0	0/0:10,0:10:24.08:0,24,567	0/0:26,0:17:33.61:0,34,912	0/1:29,0:20:17.23:17,0,983	0/0:10,0:10:27.09:0,27,974	1/1:4,7:11:21.07:433,21,0	1/1:12,10:22:5.21:115,5,0	1/1:4,17:21:48.06:796,48,0	1/1:2,8:10:6.02:118,6,0	0/0:11,0:11:33.11:0,33,1144	0/0:5,0:5:12.04:0,12,376	1/1:1,9:11:11.93:233,12,0	1/1:2,9:11:18.95:378,19,0	1/1:1,5:9:6.02:129,6,0	0/0:10,0:10:21.07:0,21,429	0/0:16,0:16:48.16:0,48,1752	0/0:24,0:24:57.20:0,57,1926	0/0:26,0:25:72.25:0,72,2629	0/0:11,0:11:30.05:0,30,874	1/1:3,6:9:2.99:64,3,0	0/0:2,1:10:3.01:0,3,98	0/0:3,9:12:0:0,0,0	./.	./.	0/1:4,6:10:0.03:0,0,0	0/1:3,11:14:46.84:520,0,47	1/1:5,6:11:15.05:299,15,0	1/1:5,5:9:12.04:253,12,0
chr10	20764054	.	A	ATGTGCG	22235.63	PASS	AC=42;AF=0.808;AN=52;BaseQRankSum=-0.813;DP=605;FS=8.512;HRun=0;HaplotypeScore=150.8524;InbreedingCoeff=0.8948;MQ=64.15;MQ0=0;MQRankSum=-12.780;QD=47.21;ReadPosRankSum=0.568;VQSLOD=4.1278;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:25,15:40:51.13:1563,51,0	./.	0/0:35,0:34:68.44:0,68,1257	0/0:27,0:21:48.16:0,48,971	1/1:14,0:14:3.01:46,3,0	1/1:14,16:30:60.21:1885,60,0	1/1:13,5:18:30.09:771,30,0	1/1:11,29:40:80.59:2294,81,0	1/1:8,6:14:30.03:840,30,0	1/1:20,0:20:20.32:155,20,0	./.	1/1:9,12:21:48.15:1435,48,0	1/1:10,9:19:36.07:1054,36,0	1/1:15,15:30:54.17:1612,54,0	1/1:3,10:27:24.08:621,24,0	0/0:12,0:12:33.11:0,33,711	0/0:34,0:34:81.26:0,81,1668	0/0:16,0:16:42.14:0,42,834	1/1:9,0:7:2.58:13,3,0	1/1:10,13:23:48.15:1414,48,0	1/1:22,4:25:35.96:789,36,0	1/1:10,8:18:36.11:1034,36,0	1/1:6,6:12:18.06:543,18,0	1/1:16,9:25:33.05:921,33,0	1/1:9,15:24:60.16:1713,60,0	1/1:18,13:30:63.08:1632,63,0	1/1:11,14:25:51.17:1699,51,0	1/1:3,2:5:6.02:201,6,0
chr10	20764061	.	T	TGC	1390.68	PASS	AB=0.994;AC=11;AF=0.212;AN=52;BaseQRankSum=13.609;DP=632;FS=8.563;HRun=0;HaplotypeScore=199.1039;InbreedingCoeff=0.3729;MQ=61.39;MQ0=0;MQRankSum=-16.230;QD=8.09;ReadPosRankSum=10.054;VQSLOD=1.4387;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:20.56:0,21,425	./.	0/0:36,0:35:99:0,102,1479	0/0:26,0:20:56.95:0,57,799	1/1:9,9:18:9:107,9,0	0/0:33,0:33:9.36:0,9,289	0/0:19,0:19:17.61:0,18,305	0/0:41,0:41:63.21:0,63,896	0/0:13,0:13:5.94:0,6,149	1/1:19,10:29:71.93:881,72,0	./.	0/0:21,0:21:5.69:0,6,210	0/0:18,0:18:5.57:0,6,185	0/0:29,0:30:10.64:0,11,372	0/1:22,0:22:2.27:2,0,80	0/0:12,0:12:36.08:0,36,525	0/0:33,0:33:87.30:0,87,1329	0/0:21,0:21:57.15:0,57,827	1/1:14,5:17:31.31:467,31,0	0/0:24,0:24:10.88:0,11,276	0/0:32,0:31:43.30:0,43,657	0/0:20,0:20:6.23:0,6,189	0/1:10,0:10:3.91:4,0,57	0/1:22,0:22:1.98:2,0,173	0/0:24,0:24:0.80:0,1,187	0/1:29,1:29:65.36:65,0,454	0/1:22,0:22:3.62:4,0,118	0/0:5,0:5:5.16:0,5,64
chr10	20764063	.	TGC	T	998.39	PASS	AB=0.832;AC=6;AF=0.111;AN=54;BaseQRankSum=-3.095;DP=634;FS=6.486;HRun=0;HaplotypeScore=201.2813;InbreedingCoeff=0.7235;MQ=61.75;MQ0=0;MQRankSum=-3.500;QD=11.89;ReadPosRankSum=-1.891;VQSLOD=2.5756;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:72.14:0,72,912	./.	0/0:35,0:35:97.21:0,97,1737	0/0:27,0:21:60.20:0,60,1055	0/0:9,7:16:2.37:0,2,8	0/0:34,0:34:75.19:0,75,932	0/0:20,0:20:41.99:0,42,553	0/0:40,0:40:99:0,113,1321	0/0:13,0:13:33.05:0,33,403	1/1:11,16:27:36.71:563,37,0	0/1:5,3:8:0:0,0,0	0/0:22,0:22:60.10:0,60,749	0/0:18,0:18:41.80:0,42,438	0/0:30,0:30:75.17:0,75,922	0/0:22,0:22:30.06:0,30,331	0/0:13,0:13:39.11:0,39,697	0/0:32,0:32:93.18:0,93,1682	0/0:22,0:22:63.14:0,63,1108	1/1:5,14:17:30.11:553,30,0	0/0:24,0:24:60.14:0,60,793	0/0:32,0:31:62.68:0,63,841	0/0:20,0:20:45.06:0,45,548	0/0:11,0:11:18.05:0,18,231	0/0:23,0:23:41.79:0,42,509	0/0:25,0:25:66.13:0,66,760	0/1:28,2:29:6.36:6,0,853	0/0:22,0:22:59.93:0,60,640	0/0:5,0:5:11.80:0,12,100
chr10	20764119	.	GC	G	14331.47	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=10.833;DP=641;FS=3.221;HRun=3;HaplotypeScore=105.7667;InbreedingCoeff=0.9954;MQ=78.33;MQ0=0;MQRankSum=-6.254;QD=32.80;ReadPosRankSum=1.380;VQSLOD=4.7361;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,33:34:90.28:1112,90,0	0/0:4,0:4:12.04:0,12,173	0/0:28,0:28:77.07:0,77,1028	0/0:23,0:23:69.22:0,69,960	0/0:11,0:11:30.10:0,30,431	1/1:2,31:33:93.29:1149,93,0	1/1:1,24:25:72.22:884,72,0	1/1:0,21:21:63.19:768,63,0	1/1:1,16:17:45.14:555,45,0	0/0:19,0:19:54.18:0,54,772	0/0:14,0:14:36.04:0,36,517	1/1:1,33:34:87.27:1077,87,0	1/1:0,20:20:57.18:706,57,0	1/1:2,21:23:54.17:669,54,0	0/0:21,0:21:36.09:0,36,496	0/0:10,0:10:30.10:0,30,430	0/0:37,0:37:99:0,111,1589	0/0:24,0:24:72.24:0,72,1032	0/0:13,0:13:39.13:0,39,554	1/1:1,26:27:75.24:930,75,0	1/1:2,38:39:99:1297,105,0	1/1:1,22:23:63.20:776,63,0	1/1:2,18:20:54.12:662,54,0	1/1:1,20:21:54.17:669,54,0	1/1:2,31:33:81.25:1003,81,0	1/1:5,29:34:41.13:960,41,0	1/1:0,20:20:57.18:706,57,0	1/1:0,12:12:33.10:409,33,0
chr10	20764335	.	CAGGCCCT	C	20064.98	PASS	AB=0.544;AC=33;AF=0.589;AN=56;BaseQRankSum=17.905;DP=629;FS=3.830;HRun=0;HaplotypeScore=179.8648;InbreedingCoeff=0.9130;MQ=74.76;MQ0=0;MQRankSum=-17.751;QD=52.12;ReadPosRankSum=0.321;VQSLOD=4.8806;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,22:24:45:1007,45,0	0/0:8,0:8:21.07:0,21,782	0/0:19,0:19:47.44:0,47,2000	0/0:16,0:16:42.14:0,42,1468	0/0:24,0:24:72.25:0,72,2798	1/1:1,25:26:53.99:1222,54,0	1/1:0,26:26:63.22:1633,63,0	1/1:1,28:29:84.12:1847,84,0	1/1:1,27:28:69.24:1789,69,0	0/0:24,0:24:66.22:0,66,2623	0/0:20,0:20:60.21:0,60,2297	1/1:1,24:25:54.13:1341,54,0	1/1:0,26:26:54.19:1400,54,0	1/1:0,22:22:57.14:1418,57,0	0/0:20,0:20:54.19:0,54,2048	0/0:32,0:32:96.32:0,96,3727	0/0:32,0:32:87.28:0,87,3281	0/0:20,0:20:60.14:0,60,2073	0/0:29,0:29:78.27:0,78,2910	1/1:2,16:18:36.07:875,36,0	1/1:1,10:11:8.96:174,9,0	1/1:1,27:28:54.08:1282,54,0	1/1:0,16:16:26.77:699,27,0	1/1:2,24:26:35.80:635,36,0	1/1:1,18:19:48.16:1245,48,0	0/1:5,26:31:99:1712,0,273	1/1:3,22:25:57.20:1475,57,0	1/1:0,5:5:12.04:311,12,0
chr10	20764997	.	C	CAG	18806.20	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-11.965;DP=662;FS=2.334;HRun=0;HaplotypeScore=69.9064;InbreedingCoeff=0.9950;MQ=65.40;MQ0=10;MQRankSum=-0.947;QD=37.76;ReadPosRankSum=5.995;VQSLOD=6.9933;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,28:25:60.21:1122,60,0	1/1:0,9:8:21.07:393,21,0	0/0:32,0:23:31.28:0,31,616	0/0:45,0:35:62.94:0,63,908	1/1:1,21:20:48.16:898,48,0	1/1:1,20:21:52.18:995,52,0	1/1:0,13:12:30.10:561,30,0	1/1:3,14:14:33.11:608,33,0	1/1:3,19:17:27.09:506,27,0	1/1:1,15:14:42.14:736,42,0	1/1:2,10:10:18.06:337,18,0	1/1:3,20:19:48.16:899,48,0	1/1:3,30:30:66.23:1235,66,0	1/1:2,26:26:63.22:1180,63,0	1/1:3,38:35:84.29:1573,84,0	0/0:23,0:23:60.16:0,60,859	0/0:39,0:38:93.30:0,93,1345	0/0:23,0:23:60.15:0,60,854	1/1:3,16:17:45.13:793,45,0	1/1:1,21:21:57.19:1047,57,0	1/1:0,20:21:48.16:898,48,0	1/1:0,22:19:45.15:842,45,0	1/1:1,15:11:27.09:505,27,0	1/1:1,24:22:48.16:898,48,0	1/1:2,15:12:24.08:449,24,0	1/1:3,20:20:48.16:872,48,0	1/1:4,21:25:57.14:1067,57,0	1/1:1,13:10:21.07:393,21,0
chr10	20765332	.	ATT	A	2428.77	PASS	AB=0.625;AC=29;AF=0.580;AN=50;BaseQRankSum=6.406;DP=282;FS=2.766;HRun=10;HaplotypeScore=48.8663;InbreedingCoeff=0.7155;MQ=65.73;MQ0=25;MQRankSum=0.847;QD=17.10;ReadPosRankSum=2.073;VQSLOD=1.5272;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,23:23:60.16:668,60,0	./.	0/0:15,0:5:4.82:0,5,84	0/0:23,0:8:6.85:0,7,44	0/0:10,0:9:21.03:0,21,303	1/1:3,8:9:21.05:234,21,0	1/1:1,4:4:3.01:33,3,0	1/1:13,11:20:35.97:375,36,0	1/1:1,3:4:9.02:100,9,0	0/0:7,0:7:21.07:0,21,311	0/0:7,0:6:14.96:0,15,162	1/1:0,2:2:6.02:67,6,0	1/1:2,5:6:12.01:125,12,0	./.	0/0:2,0:2:3:0,3,26	0/0:6,0:5:11.93:0,12,151	0/0:30,0:30:78.15:0,78,1118	0/0:20,0:21:56.62:0,57,793	0/0:10,0:9:20.93:0,21,261	1/1:1,6:8:17.77:170,18,0	1/1:1,4:5:6.01:67,6,0	./.	1/1:6,0:5:5.63:30,6,0	1/1:0,3:3:2.84:33,3,0	1/1:1,6:8:14.78:146,15,0	0/1:4,6:9:47.17:136,0,47	1/1:0,3:3:9.02:100,9,0	1/1:3,15:12:30.07:334,30,0
chr10	20768199	.	AAC	A	370.13	PASS	AB=0.946;AC=21;AF=0.404;AN=52;BaseQRankSum=7.197;DP=500;FS=0.000;HRun=0;HaplotypeScore=71.7939;InbreedingCoeff=0.0650;MQ=56.44;MQ0=7;MQRankSum=-3.963;QD=1.53;ReadPosRankSum=3.418;VQSLOD=1.2251;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:36:21.01:0,21,248	1/1:5,0:5:8.52:42,9,0	./.	./.	1/1:14,0:14:8.48:41,8,0	0/0:16,0:16:18.06:0,18,266	0/0:19,2:21:0.15:0,0,319	0/0:17,0:17:11.92:0,12,108	0/1:18,0:18:3.67:4,0,224	1/1:13,0:13:11.36:56,11,0	1/1:14,0:14:17.94:80,18,0	0/1:13,1:14:42.09:42,0,80	0/0:18,0:18:6:0,6,89	0/1:14,0:13:8.10:8,0,103	0/0:19,0:19:6.82:0,7,280	0/0:28,0:28:54.09:0,54,684	0/1:18,7:25:44.63:45,0,161	0/1:18,1:19:44.12:44,0,254	1/1:13,0:10:11.36:56,11,0	0/1:15,1:16:20.79:21,0,122	0/1:33,2:35:3.11:3,0,242	0/1:11,1:12:17.86:18,0,108	0/1:6,0:6:15.26:15,0,61	0/0:35,0:35:29.18:0,29,496	0/1:13,1:14:14.84:15,0,140	0/0:15,0:15:11.12:0,11,201	0/1:10,0:10:48.63:49,0,49	0/0:8,0:8:9:0,9,93
chr10	20768231	.	CACACACACA	C	1253.21	PASS	AB=0.794;AC=5;AF=0.089;AN=56;BaseQRankSum=8.196;DP=540;FS=0.783;HRun=0;HaplotypeScore=143.4586;InbreedingCoeff=0.0566;MQ=56.50;MQ0=16;MQRankSum=-5.839;QD=21.99;ReadPosRankSum=1.652;VQSLOD=3.1559;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:33:74.21:0,74,2081	0/1:4,1:4:7.36:189,0,7	0/0:31,0:10:24.52:0,25,235	0/0:31,0:11:29.01:0,29,355	0/1:12,4:15:15.09:198,0,15	0/0:18,0:17:46.35:0,46,1336	0/0:21,0:21:54.65:0,55,1923	0/0:18,0:16:48.15:0,48,1087	0/0:21,0:21:53.73:0,54,1709	0/1:14,1:15:60.73:302,0,61	0/1:5,5:10:6.17:418,0,6	0/0:10,0:10:27.09:0,27,887	0/0:11,0:11:26.12:0,26,686	0/0:12,0:11:30.10:0,30,1069	0/0:21,0:21:54.18:0,54,1813	0/0:33,0:33:90.24:0,90,3438	0/0:25,0:25:55.43:0,55,1717	0/0:28,0:28:80.62:0,81,1988	0/1:7,4:10:16.52:263,0,17	0/0:11,0:11:27.09:0,27,761	0/0:37,0:36:87.11:0,87,2376	0/0:16,0:16:38.90:0,39,1280	0/0:7,0:7:20.74:0,21,512	0/0:31,0:31:72.22:0,72,2583	0/0:15,0:14:34.65:0,35,1063	0/0:22,0:22:64.67:0,65,1752	0/0:21,0:21:51.15:0,51,1354	0/0:8,0:8:24.08:0,24,811
chr10	20768343	.	CTG	C	4598.65	PASS	AB=0.889;AC=35;AF=0.625;AN=56;BaseQRankSum=6.209;DP=481;FS=3.770;HRun=0;HaplotypeScore=106.2286;InbreedingCoeff=0.8356;MQ=50.57;MQ0=7;MQRankSum=0.624;QD=16.14;ReadPosRankSum=3.930;VQSLOD=4.6660;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,22:30:64.34:630,64,0	0/1:14,0:16:8.79:9,0,148	0/0:16,0:4:5.83:0,6,33	0/0:20,0:1:3.01:0,3,53	0/0:24,0:24:50.96:0,51,413	1/1:2,13:15:16.59:264,17,0	1/1:4,8:12:18.03:181,18,0	1/1:4,6:9:19.29:197,19,0	1/1:4,10:14:33.53:337,34,0	0/0:20,0:20:27.71:0,28,297	0/0:20,0:20:29.73:0,30,246	1/1:6,7:14:26.70:244,27,0	1/1:2,9:11:15.97:153,16,0	1/1:8,8:17:27.98:268,28,0	0/0:19,0:19:54.17:0,54,862	0/0:21,0:21:60.21:0,60,1182	0/0:21,0:21:60.19:0,60,1154	0/0:22,0:21:63.20:0,63,1227	0/0:13,0:12:27.82:0,28,246	1/1:6,14:19:32.18:310,32,0	1/1:7,6:13:20.87:214,21,0	1/1:7,7:14:20.99:194,21,0	1/1:7,12:18:16.54:157,17,0	1/1:1,21:23:51.32:514,51,0	1/1:6,13:19:1.93:334,2,0	1/1:4,11:16:36.96:370,37,0	1/1:15,0:15:5.38:32,5,0	1/1:1,6:7:19.29:192,19,0
chr10	20768344	.	TGG	T	4581.75	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=6.244;DP=481;FS=3.769;HRun=2;HaplotypeScore=105.7434;InbreedingCoeff=0.8758;MQ=50.37;MQ0=8;MQRankSum=-0.132;QD=17.29;ReadPosRankSum=3.950;VQSLOD=2.7585;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:30:63.86:629,64,0	0/0:16,0:16:2.58:0,3,173	0/0:18,0:4:6.02:0,6,71	0/0:23,0:3:5.74:0,6,78	0/0:25,0:25:50.98:0,51,459	1/1:14,0:14:13.47:260,13,0	1/1:11,0:11:18.03:181,18,0	1/1:9,0:8:19.29:197,19,0	1/1:14,0:14:33.06:336,33,0	0/0:20,0:20:27.75:0,28,372	0/0:20,0:20:29.73:0,30,274	1/1:13,0:13:25.87:243,26,0	1/1:11,0:11:15.50:152,15,0	1/1:17,0:17:27.36:266,27,0	0/0:18,0:18:53.37:0,53,687	0/0:21,0:21:60.19:0,60,1059	0/0:20,0:20:60.20:0,60,1130	0/0:22,0:21:63.22:0,63,1225	0/0:13,0:12:27.85:0,28,276	1/1:20,0:19:31.71:309,32,0	1/1:13,0:13:20.52:213,21,0	1/1:14,0:14:18.79:192,19,0	1/1:19,0:18:15.02:155,15,0	1/1:23,0:23:50.85:514,51,0	1/1:19,0:19:0.01:332,0,0	1/1:16,0:16:36.02:368,36,0	1/1:2,13:15:5.39:41,5,0	1/1:7,0:7:19.29:192,19,0
chr10	20768346	.	GAA	G	5614.36	PASS	AB=0.969;AC=42;AF=0.750;AN=56;BaseQRankSum=7.632;DP=493;FS=13.053;HRun=12;HaplotypeScore=103.8442;InbreedingCoeff=0.7414;MQ=50.34;MQ0=8;MQRankSum=0.520;QD=15.38;ReadPosRankSum=4.110;VQSLOD=2.2683;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:30:58.86:602,59,0	1/1:6,10:16:11.55:190,12,0	0/0:20,0:5:9.45:0,9,89	0/0:25,0:4:8.76:0,9,94	1/1:5,19:24:32.98:336,33,0	1/1:15,0:15:5.86:246,6,0	1/1:11,0:11:18.02:182,18,0	1/1:10,0:9:10.51:171,11,0	1/1:14,0:14:29.68:301,30,0	1/1:3,17:20:42.03:426,42,0	1/1:4,17:21:25.94:231,26,0	1/1:12,0:12:21.01:212,21,0	1/1:12,0:12:14.33:150,14,0	1/1:15,0:15:26.99:265,27,0	0/0:8,1:18:8.30:0,8,127	0/0:15,0:19:38.60:0,39,513	0/0:21,0:21:54.17:0,54,780	0/0:22,0:22:63.18:0,63,900	1/1:6,8:14:14.63:178,15,0	1/1:21,0:20:15.07:257,15,0	1/1:12,0:12:16.46:178,16,0	1/1:16,0:16:5.27:164,5,0	0/1:21,0:20:2.70:132,0,3	1/1:23,0:23:50.84:512,51,0	1/1:18,0:18:33.06:333,33,0	1/1:17,0:17:34.14:355,34,0	0/1:14,0:15:10.42:22,0,10	1/1:7,0:7:10.86:172,11,0
chr10	20768386	.	AT	A	594.73	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.333;DP=582;FS=0.864;HRun=1;HaplotypeScore=103.4933;InbreedingCoeff=0.8841;MQ=62.77;MQ0=1;MQRankSum=-2.383;QD=28.32;ReadPosRankSum=-0.173;VQSLOD=3.3444;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,102,1299	0/0:8,0:8:24.08:0,24,343	0/0:25,0:14:5.91:0,6,380	0/0:25,0:14:14.15:0,14,246	0/0:27,0:27:78.21:0,78,1054	0/0:23,0:23:63.11:0,63,835	0/0:20,0:20:48.12:0,48,631	0/0:26,0:26:75.24:0,75,1037	0/0:14,0:14:42.14:0,42,598	0/0:25,0:25:75.24:0,75,1028	0/0:15,0:15:45.14:0,45,614	0/0:12,0:12:36.12:0,36,501	0/0:12,0:12:33.11:0,33,468	0/0:14,0:14:42.07:0,42,573	1/1:2,19:21:51.17:690,51,0	0/0:13,0:13:36.05:0,36,422	0/0:23,0:23:69.04:0,69,877	0/0:33,0:33:93.30:0,93,1304	0/0:22,0:22:66.17:0,66,870	0/0:26,0:26:68.31:0,68,1023	0/0:14,0:14:36.12:0,36,513	0/0:15,0:15:45.12:0,45,604	0/0:19,0:19:54.14:0,54,743	0/0:28,0:28:75.14:0,75,995	0/0:31,0:31:87.27:0,87,1201	0/0:23,0:23:62.54:0,63,893	0/0:21,0:21:39.10:0,39,513	0/0:8,0:8:24.08:0,24,342
chr10	20770315	.	GT	G	524.90	PASS	AB=0.968;AC=35;AF=0.648;AN=54;BaseQRankSum=3.134;DP=118;FS=3.404;HRun=1;HaplotypeScore=21.5720;InbreedingCoeff=0.0504;MQ=74.68;MQ0=0;MQRankSum=0.898;QD=5.25;ReadPosRankSum=2.924;VQSLOD=0.9258;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:9,0:9:11.70:26,0,12	0/0:1,0:1:1.55:0,2,4	1/1:9,0:3:1.55:4,2,0	0/0:10,0:5:8.43:0,8,61	1/1:1,1:2:2.74:12,3,0	1/1:4,0:4:11.11:51,11,0	0/1:5,0:5:16.01:30,0,16	0/1:5,1:6:14.61:50,0,15	0/1:5,0:5:12.64:29,0,13	0/1:5,0:5:15.78:26,0,16	1/1:2,0:2:2.68:11,3,0	0/1:4,1:6:10.85:55,0,11	0/1:3,0:3:10.11:10,0,26	1/1:3,0:3:2.84:14,3,0	0/1:6,0:5:5.86:6,0,100	0/0:1,0:1:3.01:0,3,44	0/0:4,0:4:10.26:0,10,108	0/0:2,0:2:6.01:0,6,69	./.	1/1:5,0:5:9.67:44,10,0	1/1:2,0:2:2.68:11,3,0	1/1:5,0:5:11.22:54,11,0	1/1:3,1:4:8.59:62,9,0	1/1:1,0:1:2.90:16,3,0	0/1:6,0:6:2.64:71,0,3	1/1:4,0:4:7.99:53,8,0	1/1:6,0:6:2.93:12,3,0	1/1:2,0:2:5.62:27,6,0
chr10	20770316	.	TG	T	1556.05	PASS	AB=0.917;AC=38;AF=0.704;AN=54;BaseQRankSum=-1.845;DP=114;FS=0.984;HRun=4;HaplotypeScore=17.9631;InbreedingCoeff=0.4410;MQ=74.14;MQ0=0;MQRankSum=2.951;QD=20.21;ReadPosRankSum=1.918;VQSLOD=2.1475;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,8:8:9.03:106,9,0	1/1:1,0:1:2.96:19,3,0	0/0:9,0:3:1.55:0,2,4	0/0:9,0:4:5.94:0,6,42	1/1:1,1:2:3.01:36,3,0	1/1:0,4:4:12.04:144,12,0	1/1:2,3:5:6.02:72,6,0	1/1:2,4:6:15.03:166,15,0	0/1:4,1:5:13.22:56,0,13	1/1:1,4:5:12.04:144,12,0	1/1:0,2:2:3.01:36,3,0	1/1:4,2:6:1.11:97,1,0	0/1:3,0:3:11.12:11,0,27	1/1:0,2:2:3.01:36,3,0	0/0:7,0:6:9.90:0,10,111	0/0:2,0:2:6.01:0,6,67	0/0:4,0:4:12.01:0,12,136	0/0:2,0:2:3.01:0,3,42	./.	1/1:0,5:5:11.97:124,12,0	1/1:0,2:2:3.01:36,3,0	1/1:2,3:5:12.04:140,12,0	1/1:1,3:4:9.03:105,9,0	1/1:0,1:1:3.01:36,3,0	1/1:1,4:5:15.05:179,15,0	1/1:2,2:4:9.03:105,9,0	0/0:4,0:4:9.42:0,9,50	1/1:2,0:2:6.02:70,6,0
chr10	20770659	.	TGCGCGCGCACGCGC	T	13885.30	PASS	AB=1.000;AC=35;AF=0.648;AN=54;BaseQRankSum=6.446;DP=451;FS=0.448;HRun=0;HaplotypeScore=236.5290;InbreedingCoeff=0.8413;MQ=55.37;MQ0=1;MQRankSum=-7.391;QD=48.55;ReadPosRankSum=2.432;VQSLOD=4.4453;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:24,1:25:33.05:892,33,0	0/0:4,0:4:6.01:0,6,56	0/0:6,0:5:3.01:0,3,32	./.	0/0:15,0:15:23.94:0,24,604	1/1:16,0:16:27.05:909,27,0	1/1:11,4:16:9.02:189,9,0	1/1:6,15:21:43.95:705,44,0	1/1:11,3:14:21.07:824,21,0	0/0:20,0:20:44.61:0,45,789	0/0:13,0:13:25.38:0,25,265	1/1:22,4:26:54.14:1695,54,0	1/1:17,1:18:36.12:1337,36,0	1/1:16,1:17:33.11:1177,33,0	0/1:7,0:7:3.94:4,0,73	0/0:7,0:7:12.04:0,12,761	0/0:33,0:33:87.71:0,88,4772	0/0:42,0:42:99:0,111,6225	0/0:17,0:17:38.67:0,39,905	1/1:9,2:11:18.06:701,18,0	1/1:17,3:20:21.33:363,21,0	1/1:11,1:12:24.01:658,24,0	1/1:5,4:9:12.04:412,12,0	1/1:15,0:15:9.01:261,9,0	1/1:10,3:13:24.05:792,24,0	1/1:22,1:23:57.13:2033,57,0	1/1:12,3:15:26.96:814,27,0	1/1:1,7:8:3.01:120,3,0
chr10	20770666	.	GCA	G	3590.47	PASS	AC=38;AF=0.704;AN=54;BaseQRankSum=10.815;DP=399;FS=0.449;HRun=0;HaplotypeScore=169.3936;InbreedingCoeff=0.8661;MQ=51.87;MQ0=1;MQRankSum=-7.256;QD=14.48;ReadPosRankSum=3.496;VQSLOD=3.5092;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,12:22:29.91:244,30,0	0/0:3,0:3:3.11:0,3,8	1/1:6,0:4:2.68:11,3,0	./.	0/0:14,0:14:17.33:0,17,125	1/1:5,9:14:26.93:221,27,0	1/1:7,3:10:8.99:75,9,0	1/1:16,0:16:43.72:276,44,0	1/1:5,6:11:20.97:176,21,0	0/0:16,0:16:26.41:0,26,151	0/0:13,0:13:19.55:0,20,134	1/1:11,13:24:53.49:427,53,0	1/1:4,11:15:35.96:306,36,0	1/1:6,9:15:32.97:285,33,0	1/1:4,0:4:5.59:34,6,0	0/0:8,0:8:24.01:0,24,290	0/0:34,0:34:99:0,99,1403	0/0:42,0:42:99:0,123,1952	0/0:16,0:16:32.66:0,33,253	1/1:3,6:9:17.98:152,18,0	1/1:14,4:18:17.91:139,18,0	1/1:7,5:12:23.96:201,24,0	1/1:6,3:9:11.96:96,12,0	1/1:6,4:10:9:79,9,0	1/1:7,6:13:23.94:194,24,0	1/1:7,15:22:56.85:473,57,0	1/1:5,5:10:26.24:178,26,0	1/1:7,1:8:3:26,3,0
chr10	20770674	.	GCGCGCGCGCGCGTGTGTC	G	15367.11	PASS	AB=1.000;AC=37;AF=0.712;AN=52;BaseQRankSum=10.625;DP=411;FS=6.085;HRun=0;HaplotypeScore=248.6795;InbreedingCoeff=0.5889;MQ=45.31;MQ0=1;MQRankSum=-11.264;QD=52.09;ReadPosRankSum=5.059;VQSLOD=3.0666;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,11:22:24.08:969,24,0	0/0:4,0:4:3.85:0,4,10	./.	./.	0/1:13,0:13:1.59:2,0,264	1/1:4,9:13:24.08:1039,24,0	1/1:7,3:10:3.01:141,3,0	1/1:19,0:19:21.54:561,22,0	1/1:7,6:13:21.07:953,21,0	0/1:18,0:18:27.11:27,0,271	0/0:12,0:12:3.30:0,3,47	1/1:10,12:22:42.14:1802,42,0	1/1:8,10:18:36.12:1507,36,0	1/1:5,9:14:30.09:1299,30,0	0/0:3,0:3:6.02:0,6,164	0/0:10,0:10:30.10:0,30,1998	0/0:35,0:35:99:0,100,6602	0/0:43,0:43:99:0,129,8874	0/1:18,0:18:99:151,0,331	1/1:5,6:11:18.06:845,18,0	1/1:14,4:18:9.50:329,10,0	1/1:5,5:10:15.05:707,15,0	1/1:10,3:13:12.04:466,12,0	1/1:10,4:14:6.02:284,6,0	1/1:5,6:11:21.07:945,21,0	1/1:5,15:20:57.20:2411,57,0	1/1:5,5:10:24.04:824,24,0	1/1:7,1:8:3.01:106,3,0
chr10	20770681	.	CGCGCGTGTGTCT	C	12289.67	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=13.251;DP=446;FS=2.868;HRun=0;HaplotypeScore=230.5167;InbreedingCoeff=0.7890;MQ=46.23;MQ0=3;MQRankSum=-10.769;QD=37.02;ReadPosRankSum=5.050;VQSLOD=4.4330;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:22:21.05:540,21,0	1/1:0,4:4:6.02:231,6,0	0/0:6,0:2:3.01:0,3,129	0/0:12,0:7:7.23:0,7,383	1/1:0,15:15:9.03:344,9,0	1/1:14,0:14:21.07:606,21,0	1/1:12,0:12:3.01:86,3,0	1/1:20,0:20:24.02:307,24,0	1/1:14,0:14:21.07:567,21,0	1/1:0,20:20:48.15:1399,48,0	1/1:0,11:11:12.04:462,12,0	1/1:23,0:23:39.12:1069,39,0	1/1:19,0:19:38.92:924,39,0	1/1:16,0:16:27.09:784,27,0	0/0:5,0:5:12.04:0,12,402	0/0:10,0:10:30.10:0,30,1547	0/0:36,0:36:99:0,106,5057	0/0:45,0:45:99:0,135,6514	1/1:1,13:13:36:912,36,0	1/1:12,0:12:18.06:516,18,0	1/1:22,0:22:8.82:194,9,0	1/1:11,0:11:15.05:438,15,0	1/1:12,0:12:9.03:258,9,0	1/1:16,0:16:6.02:178,6,0	1/1:13,0:13:21.07:555,21,0	1/1:22,0:22:42.85:1436,43,0	1/1:12,0:12:21.69:442,22,0	1/1:8,0:8:3.01:41,3,0
chr10	20770685	.	CGTGTGTCT	C	8103.44	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=13.053;DP=470;FS=0.000;HRun=0;HaplotypeScore=223.3903;InbreedingCoeff=0.8236;MQ=46.50;MQ0=3;MQRankSum=-11.424;QD=23.35;ReadPosRankSum=5.550;VQSLOD=3.6145;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:24:21.07:393,21,0	1/1:4,0:4:6.02:129,6,0	0/0:6,0:2:6.02:0,6,257	0/0:15,0:10:25.64:0,26,887	1/1:15,0:15:8.69:194,9,0	1/1:17,0:17:21.07:414,21,0	1/1:8,5:13:3.01:58,3,0	1/1:16,1:17:23.20:238,23,0	1/1:14,0:14:21:375,21,0	1/1:20,0:20:40.37:781,40,0	1/1:11,0:11:12.04:258,12,0	1/1:25,0:25:37.01:714,37,0	1/1:21,0:21:38.62:620,39,0	1/1:17,0:17:27.09:537,27,0	0/0:10,0:10:24.08:0,24,781	0/0:10,0:10:27.09:0,27,1157	0/0:33,0:33:90.76:0,91,3642	0/0:49,0:49:99:0,138,5016	1/1:14,0:13:32.49:607,32,0	1/1:12,0:12:18.06:351,18,0	1/1:23,0:23:8.28:156,8,0	1/1:12,0:12:15.05:301,15,0	1/1:12,1:13:9.03:175,9,0	1/1:18,0:18:6.02:123,6,0	1/1:14,0:14:18.06:351,18,0	1/1:26,0:26:48.21:1022,48,0	1/1:12,0:12:17.89:291,18,0	1/1:5,0:5:2.80:13,3,0
chr10	20770686	.	GTGTGTC	G	8160.32	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=12.928;DP=464;FS=0.471;HRun=0;HaplotypeScore=208.4749;InbreedingCoeff=0.8351;MQ=49.48;MQ0=3;MQRankSum=-11.443;QD=24.14;ReadPosRankSum=5.306;VQSLOD=4.4037;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:13,11:24:21.07:436,21,0	1/1:4,0:4:6.02:84,6,0	0/0:7,0:3:9.03:0,9,254	0/0:15,0:11:24.97:0,25,690	1/1:15,0:15:8.51:131,9,0	1/1:10,7:17:21.07:441,21,0	1/1:12,1:13:3.01:62,3,0	1/1:7,3:10:23.80:285,24,0	1/1:9,5:14:21:395,21,0	1/1:20,0:20:37.34:512,37,0	1/1:11,0:11:12.04:172,12,0	1/1:17,8:25:37.01:732,37,0	1/1:13,8:21:38.83:673,39,0	1/1:10,7:17:27.09:571,27,0	0/0:10,0:10:24.08:0,24,581	0/0:11,0:11:30.10:0,30,1029	0/0:33,0:33:90.76:0,91,2916	0/0:49,0:49:99:0,138,3971	1/1:14,0:13:32.49:450,32,0	1/1:8,4:12:18.06:375,18,0	1/1:7,16:23:8.78:183,9,0	1/1:6,6:12:15.05:318,15,0	1/1:8,5:13:9.03:182,9,0	1/1:4,14:18:6.49:130,6,0	1/1:9,5:14:18.06:375,18,0	1/1:18,8:26:71.98:1298,72,0	1/1:8,4:12:18.02:336,18,0	1/1:3,0:3:2.96:19,3,0
chr10	20770692	.	C	CTG	298.44	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=-3.891;DP=486;FS=10.645;HRun=0;HaplotypeScore=221.3423;InbreedingCoeff=0.4526;MQ=49.78;MQ0=2;MQRankSum=4.087;QD=9.63;ReadPosRankSum=-5.174;VQSLOD=0.7151;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:19.34:0,19,86	0/0:4,0:4:5.68:0,6,28	0/0:6,0:4:12.02:0,12,126	0/0:17,0:12:22.15:0,22,287	0/0:15,0:15:8.37:0,8,43	0/0:17,0:17:19.21:0,19,81	0/0:14,0:14:2.74:0,3,12	0/1:17,0:17:8.83:9,0,32	0/0:15,0:15:16.03:0,16,66	0/0:20,0:20:11.32:0,11,131	0/0:11,0:11:11.36:0,11,55	0/0:26,0:26:32.83:0,33,140	0/0:22,0:22:26.50:0,27,111	0/0:18,0:18:24.75:0,25,106	1/1:0,10:10:24.08:389,24,0	0/0:12,0:12:33.10:0,33,403	0/0:32,0:32:86.84:0,87,1046	0/0:46,0:46:99:0,105,1281	0/0:14,0:13:22.34:0,22,104	0/0:13,0:13:16.33:0,16,69	0/0:23,0:23:8.36:0,8,40	0/0:12,0:12:13.66:0,14,58	0/0:15,0:16:8.29:0,8,36	0/0:20,0:20:5.48:0,5,23	0/0:16,0:16:16.47:0,16,69	0/0:28,0:28:12.34:0,12,163	0/0:13,0:13:13.75:0,14,60	1/1:4,0:4:0.89:2,1,0
chr10	20772461	.	GTTT	G	10906.28	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=7.545;DP=605;FS=17.014;HRun=13;HaplotypeScore=105.2415;InbreedingCoeff=0.9345;MQ=70.25;MQ0=3;MQRankSum=0.647;QD=23.20;ReadPosRankSum=2.578;VQSLOD=2.2000;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,19:21:39.05:451,39,0	1/1:3,11:14:22.03:321,22,0	0/0:17,0:11:4.30:0,4,118	0/0:13,0:9:6.43:0,6,46	1/1:6,23:30:52.17:594,52,0	1/1:3,21:24:44.94:547,45,0	1/1:4,10:14:18.01:219,18,0	1/1:4,13:17:38.87:411,39,0	1/1:4,21:25:42.09:511,42,0	1/1:6,30:35:87.03:995,87,0	1/1:1,19:20:51.10:617,51,0	1/1:1,17:18:36:435,36,0	1/1:1,13:14:21.05:255,21,0	1/1:3,14:17:28.54:362,29,0	0/0:29,0:32:90.20:0,90,1533	0/0:20,0:20:39.11:0,39,686	0/0:17,0:17:39.11:0,39,685	0/0:32,0:35:83.65:0,84,1420	1/1:3,18:21:34.99:566,35,0	1/1:3,23:25:65.94:746,66,0	1/1:6,12:20:22.31:270,22,0	1/1:1,22:23:62.73:665,63,0	1/1:3,19:23:47.90:565,48,0	1/1:1,20:22:36.03:419,36,0	1/1:0,23:23:57.17:690,57,0	1/1:2,17:19:48.03:538,48,0	1/1:5,25:30:51.09:620,51,0	1/1:3,10:13:9:109,9,0
chr10	20772708	.	G	GC	217.68	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-4.184;DP=457;FS=5.068;HRun=8;HaplotypeScore=51.7903;InbreedingCoeff=0.8399;MQ=71.66;MQ0=0;MQRankSum=-0.045;QD=21.77;ReadPosRankSum=-0.413;VQSLOD=3.5221;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:60.01:0,60,549	0/0:10,0:10:26.98:0,27,235	0/0:7,0:7:14.21:0,14,112	0/0:6,0:6:12:0,12,109	0/0:15,0:15:38.99:0,39,350	0/0:16,0:16:45.02:0,45,412	0/0:21,0:21:51.02:0,51,467	0/0:21,0:21:42:0,42,380	0/0:15,0:15:39.01:0,39,356	0/0:10,0:10:27.01:0,27,246	0/0:6,0:6:8.98:0,9,78	0/0:23,0:23:66.03:0,66,604	0/0:19,0:19:44.98:0,45,400	0/0:24,0:24:60.01:0,60,545	1/1:0,10:10:27.08:312,27,0	0/0:20,0:20:57.03:0,57,522	0/0:37,0:37:99:0,102,933	0/0:26,0:26:72.03:0,72,659	0/0:8,0:8:11.95:0,12,101	0/0:10,0:10:27.01:0,27,244	0/0:36,0:36:81.01:0,81,736	0/0:6,0:6:15.01:0,15,137	0/0:9,0:9:20.98:0,21,184	0/0:34,0:33:81.02:0,81,741	0/0:8,0:8:21.01:0,21,192	0/0:11,0:11:20.99:0,21,192	0/0:16,0:16:42.01:0,42,380	0/0:6,0:6:15:0,15,137
chr10	20773820	.	TACACACACACACAC	T	8671.68	PASS	AB=0.707;AC=41;AF=0.759;AN=54;BaseQRankSum=7.240;DP=664;FS=4.014;HRun=0;HaplotypeScore=239.5517;InbreedingCoeff=0.6205;MQ=59.23;MQ0=15;MQRankSum=-5.469;QD=19.06;ReadPosRankSum=-0.273;VQSLOD=3.3978;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:27,14:42:11.21:358,11,0	1/1:6,4:10:6.49:237,6,0	0/0:37,0:19:0:0,0,0	0/0:44,0:24:3.01:0,3,39	0/1:17,12:29:11.46:262,0,11	1/1:14,8:23:18.06:687,18,0	1/1:13,2:15:8.81:55,9,0	1/1:24,0:24:2.99:26,3,0	1/1:12,6:18:12.03:471,12,0	1/1:13,10:22:24.94:597,25,0	1/1:12,4:16:3.01:118,3,0	1/1:15,6:24:21.07:724,21,0	1/1:18,11:31:30.10:1053,30,0	1/1:6,14:23:42.10:1379,42,0	0/0:20,0:32:16.58:0,17,454	0/0:17,0:17:27.09:0,27,1566	0/0:30,0:35:72.20:0,72,3898	0/0:26,0:27:58.98:0,59,2974	1/1:10,2:13:9.03:293,9,0	1/1:4,6:10:3.01:118,3,0	1/1:31,15:46:2.96:20,3,0	./.	1/1:4,9:13:12.04:330,12,0	1/1:17,15:33:14.66:269,15,0	1/1:10,6:15:8.99:256,9,0	1/1:6,6:12:18.06:596,18,0	1/1:9,8:17:12.04:471,12,0	1/1:12,5:17:9.03:353,9,0
chr10	20775396	.	TC	T	20934.40	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=14.889;DP=811;FS=7.824;HRun=4;HaplotypeScore=128.2508;InbreedingCoeff=0.9996;MQ=79.89;MQ0=0;MQRankSum=-5.553;QD=31.91;ReadPosRankSum=2.684;VQSLOD=3.4992;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,30:33:90.27:1080,90,0	1/1:0,13:13:36.11:430,36,0	0/0:20,0:20:53.50:0,54,679	0/0:21,0:21:56.77:0,57,754	1/1:0,20:20:51.16:611,51,0	1/1:0,13:13:33.10:396,33,0	1/1:2,41:43:99:1328,111,0	1/1:0,21:21:63.19:754,63,0	1/1:1,37:38:99:1294,108,0	1/1:1,31:32:96.27:1129,96,0	1/1:0,16:16:39.12:464,39,0	1/1:1,41:42:99:1260,105,0	1/1:2,31:33:87.24:1044,87,0	1/1:2,39:41:99:1296,108,0	1/1:4,27:31:72.22:864,72,0	0/0:36,0:36:99:0,108,1480	0/0:37,0:37:99:0,105,1432	0/0:41,0:41:99:0,114,1556	1/1:3,18:21:54.12:622,54,0	1/1:0,15:15:45.14:540,45,0	1/1:5,101:106:99:3275,274,0	1/1:1,19:20:51.16:609,51,0	1/1:0,14:14:39.11:468,39,0	1/1:2,32:34:93.27:1116,93,0	1/1:1,22:23:66.20:792,66,0	1/1:0,23:23:69.19:807,69,0	1/1:0,15:15:36.10:432,36,0	1/1:0,9:9:27.08:324,27,0
chr10	20777631	.	CA	C	3113.82	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=9.783;DP=601;FS=2.506;HRun=3;HaplotypeScore=62.3815;InbreedingCoeff=0.9993;MQ=92.32;MQ0=0;MQRankSum=-3.477;QD=31.14;ReadPosRankSum=0.246;VQSLOD=3.3634;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,105,1494	1/1:1,10:11:24.07:297,24,0	0/0:28,0:28:76.80:0,77,1065	0/0:30,0:31:84.23:0,84,1150	1/1:0,29:29:72.23:893,72,0	0/0:17,0:17:51.17:0,51,734	0/0:23,0:23:69.23:0,69,992	0/0:34,0:34:90.30:0,90,1281	0/0:16,0:16:48.16:0,48,691	1/1:1,22:23:66.19:804,66,0	1/1:0,24:24:69.21:849,69,0	0/0:12,0:12:36.12:0,36,518	0/0:10,0:10:30.08:0,30,411	0/0:17,0:17:51.13:0,51,711	0/0:21,0:21:63.21:0,63,907	0/0:16,0:15:45.13:0,45,613	0/0:29,0:29:87.28:0,87,1234	0/0:30,0:30:84.28:0,84,1208	1/1:1,12:13:36.11:446,36,0	0/0:12,0:12:36.12:0,36,519	0/0:22,0:22:66.22:0,66,946	0/0:29,0:29:87.28:0,87,1236	0/0:20,0:20:57.66:0,58,822	0/0:18,0:18:54.18:0,54,778	0/0:21,0:21:60.20:0,60,864	0/0:27,1:28:44.06:0,44,1071	0/0:19,0:19:54.18:0,54,777	0/0:12,0:12:36.12:0,36,518
chr10	20778456	.	CAG	C	17526.39	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=18.132;DP=703;FS=0.927;HRun=0;HaplotypeScore=126.4864;InbreedingCoeff=0.9998;MQ=75.95;MQ0=0;MQRankSum=-5.247;QD=40.95;ReadPosRankSum=3.987;VQSLOD=6.6122;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,48:48:99:1877,120,0	0/0:11,0:11:33.11:0,33,646	0/0:16,0:15:31.70:0,32,667	0/0:38,0:37:99:0,102,1965	0/0:23,0:23:66.23:0,66,1313	1/1:0,18:18:42.14:683,42,0	1/1:0,34:34:84.28:1319,84,0	1/1:0,34:34:99:1543,99,0	1/1:0,24:24:66.23:1072,66,0	0/0:35,0:35:99:0,105,1944	0/0:13,0:13:39.13:0,39,791	1/1:0,23:23:57.19:917,57,0	1/1:0,19:19:36.12:584,36,0	1/1:0,27:27:78.27:1255,78,0	0/0:30,0:30:90.27:0,90,1759	0/0:21,0:21:63.20:0,63,1218	0/0:29,0:29:87.26:0,87,1692	0/0:26,0:26:78.16:0,78,1464	0/0:32,0:32:96.32:0,96,1871	1/1:0,20:20:42.10:640,42,0	1/1:0,43:43:99:1855,114,0	1/1:0,14:14:33.11:536,33,0	1/1:0,11:11:30.10:487,30,0	1/1:0,34:34:80.10:1298,80,0	1/1:0,21:21:51.17:829,51,0	1/1:0,26:26:72.25:1168,72,0	1/1:0,15:15:42.14:683,42,0	1/1:0,17:17:48.16:780,48,0
chr10	20779092	.	ACTCTGGCC	A	20861.42	PASS	AB=0.557;AC=33;AF=0.589;AN=56;BaseQRankSum=16.143;DP=587;FS=1.457;HRun=0;HaplotypeScore=171.8678;InbreedingCoeff=0.9201;MQ=78.14;MQ0=0;MQRankSum=-17.433;QD=60.47;ReadPosRankSum=3.612;VQSLOD=4.7801;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,25:32:60.21:1643,60,0	0/0:12,0:12:36.08:0,36,1411	0/0:27,0:27:78.27:0,78,2887	0/0:28,0:27:81.20:0,81,2912	0/0:17,0:17:51.18:0,51,2256	1/1:1,18:19:45.15:1246,45,0	1/1:3,14:17:33.11:934,33,0	1/1:2,11:13:33.10:873,33,0	1/1:0,28:28:75.26:2122,75,0	0/0:21,0:21:63.22:0,63,2772	0/0:11,0:11:33.11:0,33,1461	1/1:0,23:23:45.15:1273,45,0	1/1:0,17:17:45.15:1273,45,0	1/1:0,19:19:39.13:1103,39,0	0/0:26,0:26:72.25:0,72,3152	0/0:14,0:14:39.13:0,39,1683	0/0:30,0:30:90.29:0,90,3711	0/0:30,0:30:84.27:0,84,3573	0/0:26,0:26:75.26:0,75,3321	1/1:4,20:24:54.19:1528,54,0	1/1:7,12:19:21.07:522,21,0	1/1:2,18:20:51.18:1416,51,0	1/1:1,17:18:33.58:934,34,0	1/1:2,8:10:12.04:314,12,0	1/1:2,18:20:51.17:1370,51,0	0/1:7,27:34:99:2189,0,308	1/1:0,24:24:57.20:1613,57,0	1/1:0,8:8:18.06:509,18,0
chr10	20779216	.	CCGG	C	16196.96	PASS	AB=0.532;AC=33;AF=0.589;AN=56;BaseQRankSum=9.225;DP=625;FS=6.544;HRun=0;HaplotypeScore=120.3281;InbreedingCoeff=0.9163;MQ=91.21;MQ0=0;MQRankSum=-9.045;QD=41.64;ReadPosRankSum=3.573;VQSLOD=5.9281;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,39:41:99:1798,108,0	0/0:3,0:3:9.03:0,9,204	0/0:41,0:41:99:0,105,2238	0/0:16,0:16:45.10:0,45,834	0/0:29,0:29:81.28:0,81,1773	1/1:0,18:18:54.18:898,54,0	1/1:1,24:25:60.21:999,60,0	1/1:4,17:21:51.17:829,51,0	1/1:1,21:22:51.17:849,51,0	0/0:21,0:21:60.21:0,60,1338	0/0:8,0:8:24.08:0,24,544	1/1:2,27:29:72.25:1198,72,0	1/1:0,20:20:54.18:896,54,0	1/1:0,21:21:48.16:799,48,0	0/0:25,0:25:69.22:0,69,1505	0/0:23,0:23:66.21:0,66,1421	0/0:34,0:34:99:0,102,2264	0/0:15,0:15:39.11:0,39,838	0/0:21,0:21:45.15:0,45,1014	1/1:0,19:19:51.17:848,51,0	1/1:1,18:19:48.16:800,48,0	1/1:1,26:27:72.25:1198,72,0	1/1:2,22:24:60.21:997,60,0	1/1:1,12:13:27.09:447,27,0	1/1:1,12:13:33.11:546,33,0	0/1:4,29:33:99:1325,0,108	1/1:0,35:35:90.29:1469,90,0	1/1:2,7:9:18.06:300,18,0
chr10	20779396	.	TATAA	T	903.88	PASS	AB=0.638;AC=8;AF=0.143;AN=56;BaseQRankSum=9.601;DP=706;FS=7.926;HRun=0;HaplotypeScore=202.9509;InbreedingCoeff=0.4321;MQ=88.33;MQ0=0;MQRankSum=-9.035;QD=11.16;ReadPosRankSum=0.828;VQSLOD=2.0782;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,123,3537	1/1:2,6:8:9.33:141,9,0	0/0:31,0:31:90.03:0,90,2269	0/0:23,0:23:69.24:0,69,1812	0/1:0,12:12:11.22:11,0,61	0/0:26,0:26:78.27:0,78,2214	0/0:35,0:35:99:0,105,2673	0/0:38,0:38:99:0,111,3055	0/0:29,0:29:87.28:0,87,2437	1/1:2,12:14:4.24:448,4,0	0/1:1,5:6:1.34:112,0,1	0/0:30,0:30:90.31:0,90,2515	0/0:17,0:17:51.18:0,51,1456	0/0:23,0:23:69.24:0,69,1952	0/0:32,0:32:96.33:0,96,2737	0/0:20,0:20:60.21:0,60,1694	0/0:45,0:45:99:0,135,3815	0/0:35,0:35:99:0,105,3040	0/1:4,8:12:33.88:268,0,34	0/0:16,0:16:48.16:0,48,1345	0/0:43,0:43:99:0,129,3621	0/0:29,0:29:87.30:0,87,2427	0/0:21,0:21:57.19:0,57,1514	0/0:34,0:34:99:0,102,2882	0/0:20,0:20:60.18:0,60,1671	0/1:26,3:29:58.27:58,0,1992	0/0:23,0:23:66.23:0,66,1911	0/0:14,0:14:42.14:0,42,1184
chr10	20779401	.	CA	C	361.53	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=7.987;DP=714;FS=3.242;HRun=2;HaplotypeScore=168.5315;InbreedingCoeff=0.8779;MQ=89.09;MQ0=0;MQRankSum=-7.752;QD=10.04;ReadPosRankSum=-0.007;VQSLOD=1.6185;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,129,2053	1/1:1,6:7:3.38:52,3,0	0/0:32,1:33:77.24:0,77,1366	0/0:23,0:23:69.20:0,69,1033	0/0:4,12:16:2.67:0,3,16	0/0:25,0:25:75.26:0,75,1197	0/0:31,0:31:93.29:0,93,1430	0/0:39,0:39:99:0,111,1704	0/0:29,0:29:87.28:0,87,1367	1/1:1,12:13:38.04:245,38,0	1/1:1,5:6:7.03:40,7,0	0/0:30,0:30:90.31:0,90,1435	0/0:18,0:18:54.14:0,54,807	0/0:25,0:25:75.26:0,75,1193	0/0:31,0:31:93.32:0,93,1487	0/0:21,0:21:63.21:0,63,1007	0/0:43,0:43:99:0,129,2062	0/0:37,0:37:99:0,111,1749	1/1:2,8:10:25.79:170,26,0	0/0:17,0:17:48.16:0,48,759	0/0:44,0:44:99:0,132,2099	0/0:31,0:31:90.28:0,90,1388	0/0:20,0:20:54.18:0,54,845	0/0:34,0:34:99:0,102,1605	0/0:22,0:22:63.20:0,63,969	0/0:26,3:29:30.86:0,31,1126	0/0:23,0:23:66.22:0,66,1052	0/0:14,0:14:42.14:0,42,664
chr10	20779768	.	T	TTGGAGCAAGA	25704.94	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-11.816;DP=634;FS=0.398;HRun=0;HaplotypeScore=162.2921;InbreedingCoeff=0.9332;MQ=83.17;MQ0=1;MQRankSum=-13.322;QD=61.94;ReadPosRankSum=-1.943;VQSLOD=3.9720;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:13,28:46:69.24:3498,69,0	0/0:6,0:6:12.04:0,12,316	0/0:23,0:24:36.10:0,36,772	0/0:30,0:30:24.54:0,25,1333	0/0:14,0:14:33.03:0,33,895	1/1:3,11:15:27.09:1367,27,0	1/1:16,14:36:33.11:1673,33,0	1/1:20,6:39:57.20:1797,57,0	1/1:13,17:34:60.21:2918,60,0	0/0:14,0:14:33.11:0,33,1006	0/0:4,0:4:9.03:0,9,216	1/1:6,23:34:56.96:2886,57,0	1/1:7,14:22:30.10:1520,30,0	1/1:7,22:36:57.20:2886,57,0	0/0:38,0:38:96.33:0,96,2898	0/0:22,0:22:54.16:0,54,1550	0/0:31,0:31:75.21:0,75,2059	0/0:21,0:21:51.13:0,51,1375	0/0:15,0:15:30.09:0,30,859	1/1:1,3:7:9:325,9,0	1/1:19,7:30:15.05:760,15,0	1/1:8,7:17:9.03:456,9,0	1/1:6,4:10:12.04:608,12,0	1/1:19,15:40:33.11:1670,33,0	1/1:3,7:12:18.06:913,18,0	1/1:10,8:25:42.04:1667,42,0	1/1:5,3:8:12.04:609,12,0	1/1:1,1:3:3.01:152,3,0
chr10	20779956	.	GA	G	397.73	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=5.740;DP=208;FS=4.345;HRun=2;HaplotypeScore=28.1006;InbreedingCoeff=0.7479;MQ=102.85;MQ0=0;MQRankSum=-1.769;QD=22.10;ReadPosRankSum=2.526;VQSLOD=3.6044;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:27.09:0,27,404	1/1:0,2:2:6.02:78,6,0	0/0:12,0:12:36.11:0,36,495	0/0:15,0:15:33.99:0,34,451	1/1:0,2:2:3.01:39,3,0	0/0:7,0:7:18.06:0,18,270	0/0:12,0:12:36.12:0,36,539	0/0:16,0:16:42.14:0,42,629	0/0:12,0:12:33.11:0,33,494	1/1:3,6:9:18.06:234,18,0	1/1:0,1:1:3.01:39,3,0	0/0:10,0:10:30.10:0,30,445	0/0:9,0:9:24.08:0,24,359	0/0:7,0:7:21.07:0,21,314	0/0:23,0:23:66.22:0,66,989	0/0:5,0:5:15.05:0,15,225	0/0:3,0:3:9.03:0,9,135	0/0:4,0:4:12.04:0,12,180	1/1:0,4:4:12.04:156,12,0	0/0:4,0:4:12.04:0,12,180	0/0:13,0:13:30.10:0,30,449	0/0:1,0:1:3.01:0,3,45	0/0:2,0:2:6.02:0,6,90	0/0:8,0:8:18.06:0,18,270	0/0:7,0:7:21.07:0,21,315	0/0:3,0:3:6.02:0,6,90	0/0:4,0:4:12.04:0,12,180	0/0:4,0:4:12.04:0,12,180
chr10	20780073	.	G	GTTTCTTTC	6440.92	PASS	AB=1.000;AC=35;AF=0.648;AN=54;BaseQRankSum=2.859;DP=188;FS=8.194;HRun=0;HaplotypeScore=54.7165;InbreedingCoeff=0.6474;MQ=75.32;MQ0=1;MQRankSum=-7.163;QD=47.71;ReadPosRankSum=1.369;VQSLOD=3.0669;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:11,4:15:42.02:1347,42,0	./.	0/1:15,0:9:17.33:17,0,149	0/0:9,0:4:1.65:0,2,5	0/0:3,0:3:9.02:0,9,180	1/1:4,0:4:12.04:385,12,0	1/1:0,8:16:15.05:573,15,0	1/1:15,0:14:37.86:1091,38,0	1/1:5,0:5:9.02:189,9,0	0/0:3,0:3:9.03:0,9,189	0/0:1,0:1:3.01:0,3,80	1/1:0,2:5:3.01:125,3,0	1/1:0,5:9:11.76:481,12,0	1/1:3,1:4:9.03:346,9,0	0/0:10,0:10:30.10:0,30,709	0/0:5,0:5:15.04:0,15,345	0/0:10,0:10:30.08:0,30,710	0/0:7,0:7:15.01:0,15,303	0/0:5,0:5:12.03:0,12,259	1/1:2,0:2:6.01:126,6,0	1/1:4,2:6:9.03:278,9,0	1/1:3,0:3:8.93:99,9,0	1/1:0,1:4:3.01:94,3,0	1/1:4,0:4:9.02:187,9,0	1/1:1,2:11:3.01:111,3,0	1/1:8,0:8:21.07:692,21,0	1/1:1,4:8:6.02:251,6,0	1/1:1,0:1:3.01:46,3,0
chr10	20780966	.	T	TA	10492.42	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=17.265;DP=558;FS=20.066;HRun=4;HaplotypeScore=144.6781;InbreedingCoeff=0.9900;MQ=77.30;MQ0=0;MQRankSum=-7.856;QD=30.32;ReadPosRankSum=0.861;VQSLOD=2.7729;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,27:31:75:931,75,0	0/0:6,0:6:18.05:0,18,204	0/0:19,0:19:41.13:0,41,440	0/0:13,0:13:24.85:0,25,213	0/0:18,0:18:51.13:0,51,568	1/1:3,20:23:51.17:696,51,0	1/1:6,17:23:48.03:607,48,0	1/1:6,19:25:66.08:824,66,0	1/1:1,22:23:60.06:771,60,0	0/0:28,0:28:77.96:0,78,863	0/0:16,0:16:48.14:0,48,544	1/1:6,23:29:63.07:814,63,0	1/1:1,18:19:45.15:614,45,0	1/1:3,15:18:42.07:550,42,0	0/0:18,0:18:45.11:0,45,501	0/0:19,0:19:45.13:0,45,510	0/0:29,0:29:87.25:0,87,986	0/0:26,0:26:72.20:0,72,817	0/0:20,0:20:48.13:0,48,544	1/1:3,17:20:33.08:538,33,0	1/1:1,14:15:27.09:365,27,0	1/1:3,18:21:48.07:631,48,0	1/1:1,11:12:29.93:361,30,0	1/1:2,14:16:36.07:469,36,0	1/1:2,15:17:42.14:572,42,0	1/1:4,20:24:60.14:795,60,0	1/1:3,24:26:63.12:833,63,0	1/1:0,3:3:9.03:123,9,0
chr10	20781513	.	G	GTGTGAGGCTGCTGGT	10642.07	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=7.058;DP=685;FS=7.123;HRun=0;HaplotypeScore=276.7808;InbreedingCoeff=0.9993;MQ=86.93;MQ0=0;MQRankSum=-12.598;QD=123.75;ReadPosRankSum=-1.126;VQSLOD=3.5144;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:57:99:0,163,6421	1/1:2,8:12:30.10:2064,30,0	0/0:21,0:21:53.56:0,54,1589	0/0:29,0:29:66.17:0,66,2098	1/1:9,5:15:33.11:1831,33,0	0/0:21,0:21:57.18:0,57,2207	0/0:21,0:21:60.13:0,60,2259	0/0:31,0:31:81.24:0,81,2394	0/0:32,0:32:87.30:0,87,3707	1/1:19,7:26:66.07:3011,66,0	1/1:6,7:15:27.09:1761,27,0	0/0:35,0:35:96.32:0,96,3774	0/0:14,0:14:36.12:0,36,1468	0/0:28,0:28:78.27:0,78,3442	0/0:41,0:40:99:0,111,4467	0/0:28,0:28:81.24:0,81,3040	0/0:30,0:30:90.31:0,90,3828	0/0:17,0:17:51.14:0,51,2048	1/1:9,6:18:41.97:1976,42,0	0/0:15,0:15:42.14:0,42,1860	0/0:25,0:25:66.21:0,66,2533	0/0:19,0:19:54.17:0,54,2162	0/0:22,0:22:51.18:0,51,2223	0/0:24,0:24:63.20:0,63,2407	0/0:17,0:17:45.15:0,45,1910	0/0:31,0:31:93.25:0,93,3536	0/0:32,0:32:90.22:0,90,3662	0/0:9,0:9:27.06:0,27,1071
chr10	20781608	.	T	TG	25175.47	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-10.537;DP=731;FS=3.836;HRun=2;HaplotypeScore=74.6767;InbreedingCoeff=0.9990;MQ=84.37;MQ0=0;MQRankSum=-5.345;QD=44.25;ReadPosRankSum=0.527;VQSLOD=4.2284;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,64:65:99:3000,172,0	1/1:1,10:11:30.10:467,30,0	0/0:22,0:22:63.18:0,63,834	0/0:22,0:22:50.40:0,50,718	1/1:1,21:22:57.19:911,57,0	1/1:0,26:26:66.23:1055,66,0	1/1:1,19:20:57.19:902,57,0	1/1:0,32:31:93.29:1437,93,0	1/1:0,32:32:90.31:1439,90,0	1/1:1,22:23:66.22:1054,66,0	1/1:1,7:8:21.07:335,21,0	1/1:0,30:30:84.29:1343,84,0	1/1:1,20:21:60.20:944,60,0	1/1:1,32:33:93.32:1482,93,0	0/0:35,0:35:99:0,102,1407	0/0:21,0:21:63.21:0,63,881	0/0:33,0:33:99:0,99,1382	0/0:29,0:29:87.25:0,87,1195	1/1:1,18:19:54.18:848,54,0	1/1:1,14:15:42.14:671,42,0	1/1:0,59:59:99:2731,172,0	1/1:0,18:18:48.16:766,48,0	1/1:0,22:22:54.18:863,54,0	1/1:0,44:44:99:2014,126,0	1/1:0,19:19:51.17:815,51,0	1/1:1,14:15:42.14:671,42,0	1/1:0,21:20:57.19:910,57,0	1/1:0,14:14:33.11:518,33,0
chr10	20782237	.	C	CT	8482.35	PASS	AB=0.588;AC=45;AF=0.804;AN=56;BaseQRankSum=-0.375;DP=552;FS=12.212;HRun=9;HaplotypeScore=84.0022;InbreedingCoeff=0.8747;MQ=73.22;MQ0=5;MQRankSum=-2.177;QD=21.75;ReadPosRankSum=1.163;VQSLOD=4.7189;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,20:26:45.12:498,45,0	1/1:1,8:9:18.05:199,18,0	0/0:44,0:22:33.70:0,34,337	0/0:47,0:24:15.33:0,15,203	1/1:6,13:20:16.04:392,16,0	1/1:8,11:19:30.08:330,30,0	1/1:3,17:20:42.11:464,42,0	1/1:10,18:28:56.31:580,56,0	0/1:3,7:10:1.99:208,0,2	1/1:5,13:18:18.82:417,19,0	1/1:3,13:17:10.04:333,10,0	1/1:1,14:15:36.10:397,36,0	1/1:0,5:5:15.04:166,15,0	1/1:4,7:11:18.05:199,18,0	1/1:4,19:23:25.08:505,25,0	0/0:17,0:17:44.96:0,45,386	0/0:26,0:26:74.02:0,74,631	0/0:25,0:26:73.04:0,73,606	1/1:9,15:22:16.11:390,16,0	1/1:3,12:15:13.05:367,13,0	1/1:0,3:3:6.02:66,6,0	1/1:1,10:11:30.04:318,30,0	1/1:2,10:12:24.06:265,24,0	1/1:0,19:19:48.13:531,48,0	1/1:3,16:19:36.10:396,36,0	1/1:7,11:17:33.06:351,33,0	1/1:5,24:28:54.10:582,54,0	1/1:4,15:19:48.13:527,48,0
chr10	20782424	.	ACT	A	494.95	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=1.085;DP=364;FS=9.154;HRun=0;HaplotypeScore=66.1853;InbreedingCoeff=0.7478;MQ=65.42;MQ0=24;MQRankSum=-0.385;QD=13.75;ReadPosRankSum=-1.498;VQSLOD=1.8078;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:20.95:0,21,170	1/1:5,0:5:14.97:123,15,0	0/0:26,0:15:35.71:0,36,294	0/0:38,0:13:2.68:0,3,156	0/0:14,0:13:0.89:0,1,2	0/0:15,0:15:20.91:0,21,165	0/0:17,0:16:29.91:0,30,243	0/0:18,0:18:53.38:0,53,425	0/0:3,0:3:3:0,3,25	1/1:14,0:14:35.70:293,36,0	1/1:2,4:6:3.48:34,3,0	0/0:8,0:8:8.99:0,9,74	0/0:4,0:3:5.95:0,6,44	0/0:6,0:6:8.03:0,8,56	0/0:7,0:7:7.24:0,7,53	0/0:16,0:16:30.52:0,31,456	0/0:23,0:23:56.65:0,57,575	0/0:14,0:13:33.44:0,33,351	1/1:11,0:9:23.89:192,24,0	0/0:11,0:11:17.98:0,18,150	0/0:18,0:15:26.83:0,27,206	0/0:8,0:8:20.95:0,21,169	0/0:9,0:9:20.86:0,21,158	0/0:11,0:11:14.98:0,15,124	0/0:13,0:13:24.45:0,24,202	0/0:8,0:8:23.87:0,24,192	0/0:10,0:9:24.19:0,24,180	0/0:14,0:12:31.96:0,32,222
chr10	20782425	.	CTCTGTGTGTGTG	C	706.60	PASS	AB=0.940;AC=16;AF=0.286;AN=56;BaseQRankSum=3.728;DP=365;FS=25.113;HRun=0;HaplotypeScore=116.0070;InbreedingCoeff=0.3046;MQ=65.22;MQ0=25;MQRankSum=0.107;QD=5.99;ReadPosRankSum=1.317;VQSLOD=0.5295;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:20.95:0,21,170	1/1:5,0:5:14.99:144,15,0	0/0:26,0:15:35.71:0,36,294	0/0:38,0:13:2.68:0,3,156	0/1:1,12:13:0:0,0,0	0/0:15,0:15:17.11:0,17,157	0/0:17,0:16:29.86:0,30,243	0/0:21,0:20:53.42:0,53,466	0/0:4,0:4:3:0,3,25	1/1:12,0:12:35.70:330,36,0	1/1:4,0:6:6:73,6,0	0/1:8,0:8:10.56:11,0,20	0/0:3,0:2:5.95:0,6,43	0/0:6,0:6:9:0,9,136	0/1:7,0:7:40.96:58,0,41	0/0:16,0:16:39.04:0,39,1390	0/0:24,0:24:68.95:0,69,2165	0/0:15,0:14:41.42:0,41,1395	1/1:10,0:8:23.89:192,24,0	0/1:11,0:11:2.44:2,0,111	0/0:17,0:14:26.42:0,26,205	0/1:8,0:8:12.01:12,0,134	0/0:9,0:9:13.49:0,13,126	0/0:11,0:11:14.98:0,15,124	0/1:13,0:13:8:8,0,162	0/0:8,0:8:18.42:0,18,160	0/1:10,0:9:17.35:17,0,164	0/1:14,0:12:25.53:26,0,131
chr10	20782427	.	CTG	C	68.66	PASS	AB=0.956;AC=19;AF=0.633;AN=30;BaseQRankSum=2.950;DP=365;FS=3.133;HRun=0;HaplotypeScore=66.3897;InbreedingCoeff=0.0606;MQ=60.32;MQ0=28;MQRankSum=1.050;QD=0.49;ReadPosRankSum=1.450;VQSLOD=1.4308;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	0/0:14,0:13:0.89:0,1,2	./.	./.	./.	0/1:5,0:5:0:0,0,0	./.	0/1:6,0:6:9.64:11,0,10	0/1:7,1:8:0:0,0,0	./.	1/1:6,0:6:2.74:12,3,0	1/1:4,0:6:2.84:14,3,0	0/1:15,1:16:10.85:11,0,184	0/1:24,1:24:42.57:43,0,164	0/0:16,0:15:0.83:0,1,178	./.	./.	./.	1/1:9,0:9:1.55:4,2,0	0/1:8,1:9:0:0,0,0	./.	1/1:15,0:15:2.99:24,3,0	0/1:8,0:8:0:0,0,0	1/1:10,0:9:2.99:24,3,0	1/1:16,0:12:4.93:13,5,0
chr10	20782481	.	G	GCA	295.47	PASS	AB=1.000;AC=25;AF=0.568;AN=44;BaseQRankSum=5.545;DP=264;FS=0.000;HRun=0;HaplotypeScore=73.8316;InbreedingCoeff=0.4253;MQ=51.74;MQ0=17;MQRankSum=-4.064;QD=2.46;ReadPosRankSum=-2.090;VQSLOD=1.2235;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:13,1:12:5.49:24,5,0	0/0:5,0:5:0.42:0,0,1	0/0:5,0:5:15.03:0,15,179	0/1:8,0:4:0.15:0,0,38	1/1:17,0:16:0.37:5,0,0	./.	0/0:7,0:6:1.95:0,2,7	1/1:8,0:6:2.10:119,2,0	1/1:8,0:8:9:86,9,0	0/1:10,0:9:16.98:17,0,38	0/0:11,0:11:0.89:0,1,3	1/1:10,0:8:0.46:0,0,0	./.	1/1:4,1:4:5.98:76,6,0	0/0:10,0:10:6.86:0,7,53	0/0:15,0:14:17.92:0,18,376	0/0:23,0:22:63.15:0,63,836	0/0:23,0:23:56.95:0,57,731	1/1:7,0:7:1.55:15,2,0	1/1:8,0:8:0.47:1,0,0	1/1:6,0:5:2.74:12,3,0	./.	1/1:7,1:8:0.47:1,0,0	0/1:7,0:6:0:0,0,0	./.	1/1:4,0:3:6.01:64,6,0	./.	./.
chr10	20782484	.	C	CTT	531.35	PASS	AB=1.000;AC=15;AF=0.326;AN=46;BaseQRankSum=7.588;DP=288;FS=32.257;HRun=0;HaplotypeScore=74.9236;InbreedingCoeff=0.6459;MQ=61.99;MQ0=14;MQRankSum=-7.165;QD=6.64;ReadPosRankSum=-3.812;VQSLOD=0.6997;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:17:5.49:24,5,0	1/1:0,5:5:8.42:40,8,0	0/0:10,0:10:18.06:0,18,261	0/0:9,0:5:11.86:0,12,103	1/1:3,13:15:14.25:117,14,0	./.	0/0:11,0:10:2.76:0,3,21	0/0:8,0:7:13.85:0,14,156	0/0:8,0:8:6.02:0,6,74	1/1:4,5:8:22.59:258,23,0	1/1:0,9:9:9.29:32,9,0	0/0:9,0:7:3.01:0,3,37	0/0:5,0:5:2.99:0,3,24	0/1:9,0:8:2.29:2,0,20	0/0:10,0:10:20.97:0,21,211	0/0:15,0:14:36.11:0,36,540	0/0:24,0:24:66.20:0,66,1019	0/0:22,0:22:57.17:0,57,892	1/1:2,4:6:17.81:204,18,0	./.	1/1:8,0:7:2.74:12,3,0	./.	./.	0/0:8,0:7:3.44:0,3,20	0/0:21,0:20:0:0,0,0	0/0:7,0:6:8.93:0,9,80	0/0:4,0:3:5.83:0,6,38	./.
chr10	20782485	.	A	ACGCG	1372.54	PASS	AC=32;AF=0.727;AN=44;BaseQRankSum=5.122;DP=300;FS=0.000;HRun=0;HaplotypeScore=79.1621;InbreedingCoeff=0.7140;MQ=63.69;MQ0=13;MQRankSum=-6.696;QD=8.74;ReadPosRankSum=-4.977;VQSLOD=0.3219;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,11:19:5.84:34,6,0	1/1:5,0:5:8.60:45,9,0	0/0:10,0:10:21.02:0,21,305	0/0:10,0:6:11.23:0,11,119	1/1:16,0:16:24.14:150,24,0	./.	./.	1/1:9,0:7:15.04:180,15,0	1/1:8,0:8:6.02:90,6,0	1/1:9,0:8:22.86:229,23,0	1/1:9,0:9:19.43:89,19,0	1/1:8,1:7:2.97:20,3,0	1/1:5,0:5:5.95:43,6,0	1/1:3,6:8:6.02:95,6,0	0/0:10,0:10:24.07:0,24,340	0/0:15,0:14:7.09:0,7,368	0/0:25,0:25:60.14:0,60,1001	0/0:22,0:22:51.15:0,51,874	1/1:6,0:6:15.02:173,15,0	./.	1/1:3,6:9:2.99:24,3,0	./.	./.	1/1:9,0:8:2.97:20,3,0	1/1:15,6:20:3:25,3,0	1/1:2,5:6:9.03:173,9,0	1/1:5,0:3:11.97:146,12,0	./.
chr10	20782488	.	C	CTT	1497.19	PASS	AB=1.000;AC=12;AF=0.250;AN=48;BaseQRankSum=6.717;DP=326;FS=16.922;HRun=0;HaplotypeScore=79.4283;InbreedingCoeff=0.5871;MQ=65.58;MQ0=7;MQRankSum=-6.565;QD=17.41;ReadPosRankSum=-2.583;VQSLOD=1.5071;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:20,0:20:12.46:12,0,77	1/1:0,5:5:9.03:108,9,0	0/0:11,0:11:24.07:0,24,334	0/0:11,0:7:13.22:0,13,113	1/1:7,13:20:41.86:521,42,0	./.	0/0:13,0:12:5.74:0,6,36	0/0:13,0:12:21.03:0,21,251	0/0:11,0:11:9.03:0,9,131	1/1:5,5:9:21.24:366,21,0	1/1:2,9:11:27.02:279,27,0	0/0:8,0:7:3.01:0,3,43	0/0:6,0:6:8.95:0,9,69	0/0:12,0:11:0.72:0,1,69	0/0:10,0:10:24.08:0,24,390	0/0:15,0:14:30.09:0,30,462	0/0:25,0:25:66.22:0,66,1060	0/0:20,0:20:51.15:0,51,831	1/1:2,4:10:27.07:365,27,0	./.	0/1:10,0:10:6.21:6,0,18	./.	0/0:8,0:8:3.01:0,3,46	0/0:8,0:8:6.47:0,6,65	0/0:20,0:20:2.98:0,3,21	0/0:8,0:7:11.85:0,12,120	0/0:9,0:7:23.78:0,24,229	./.
chr10	20782914	.	A	AT	2722.16	PASS	AB=0.914;AC=11;AF=0.196;AN=56;BaseQRankSum=11.946;DP=733;FS=1.503;HRun=1;HaplotypeScore=93.5348;InbreedingCoeff=0.8840;MQ=84.05;MQ0=0;MQRankSum=-9.325;QD=23.88;ReadPosRankSum=-1.369;VQSLOD=3.2957;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,153,1973	1/1:1,9:10:21.07:304,21,0	0/0:31,0:31:84.27:0,84,1086	0/0:21,0:21:54.17:0,54,687	1/1:2,19:21:51.13:713,51,0	0/0:36,0:36:99:0,108,1387	0/0:26,0:26:78.25:0,78,1012	0/0:32,0:32:96.28:0,96,1198	0/0:24,0:24:66.21:0,66,856	1/1:2,19:21:60.20:882,60,0	1/1:0,12:12:18.02:232,18,0	0/0:25,0:25:75.20:0,75,930	0/0:21,0:21:63.20:0,63,802	0/0:25,0:25:69.21:0,69,881	0/0:41,0:40:99:0,120,1525	0/0:31,0:31:93.30:0,93,1207	0/0:35,0:35:99:0,105,1346	0/0:16,0:16:42.11:0,42,527	1/1:4,14:18:54.09:730,54,0	0/0:21,0:21:51.17:0,51,662	0/0:45,0:45:99:0,129,1661	0/0:23,0:23:63.12:0,63,782	0/0:12,0:12:33.11:0,33,428	0/0:32,0:32:96.31:0,96,1246	0/0:24,0:24:72.23:0,72,935	0/1:29,3:32:38.28:38,0,1006	0/0:34,0:34:99:0,102,1288	0/0:12,0:12:36.10:0,36,451
chr10	20783195	.	GAACCCCAGCA	G	23363.90	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=15.103;DP=636;FS=4.710;HRun=0;HaplotypeScore=209.2131;InbreedingCoeff=0.9828;MQ=73.03;MQ0=0;MQRankSum=-15.538;QD=51.12;ReadPosRankSum=0.229;VQSLOD=4.4215;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:17,28:45:58.44:1783,58,0	1/1:1,7:8:21.07:641,21,0	0/0:27,0:23:36.12:0,36,1638	0/0:27,0:27:10.50:0,11,1605	1/1:6,11:17:27.09:791,27,0	1/1:5,11:16:33.11:1013,33,0	1/1:9,15:24:30.10:921,30,0	1/1:13,9:22:27.08:762,27,0	1/1:1,19:20:48.16:1473,48,0	1/1:8,6:14:18.06:552,18,0	1/1:5,14:19:27.09:773,27,0	1/1:2,18:20:45.15:1381,45,0	1/1:9,20:29:60.21:1841,60,0	1/1:5,16:21:45.15:1380,45,0	0/0:26,0:26:60.21:0,60,2642	0/0:26,0:26:75.26:0,75,3716	0/0:43,0:43:99:0,105,4958	0/0:30,0:30:78.27:0,78,3686	1/1:6,12:18:36.12:1098,36,0	1/1:5,8:13:18.06:552,18,0	1/1:9,9:18:15.05:392,15,0	1/1:5,18:23:45.15:1362,45,0	1/1:5,15:20:33.11:1010,33,0	1/1:9,23:32:39.13:1191,39,0	1/1:8,10:18:30.10:900,30,0	1/1:10,18:28:57.20:1706,57,0	1/1:4,13:17:30.10:921,30,0	1/1:2,13:15:30.10:921,30,0
chr10	20783441	.	CATCCCTGGGTTTTTGAGACAGGGT	C	3770.54	PASS	AB=0.958;AC=11;AF=0.196;AN=56;BaseQRankSum=6.637;DP=643;FS=4.608;HRun=0;HaplotypeScore=375.1629;InbreedingCoeff=0.8629;MQ=80.04;MQ0=0;MQRankSum=-5.205;QD=61.81;ReadPosRankSum=-1.596;VQSLOD=1.8259;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,156,14972	1/1:0,6:6:9.03:608,9,0	0/0:30,0:30:90.30:0,90,5694	0/0:20,0:20:60.21:0,60,3662	1/1:0,10:10:21.07:1289,21,0	0/0:16,0:16:39.13:0,39,3797	0/0:26,0:26:78.25:0,78,7168	0/0:33,0:33:99:0,99,7760	0/0:35,0:35:99:0,105,10122	1/1:0,9:9:21.02:819,21,0	1/1:0,5:5:11.95:445,12,0	0/0:24,0:24:69.24:0,69,7350	0/0:27,0:27:81.20:0,81,6404	0/0:36,0:36:99:0,105,9737	0/0:25,0:25:75.24:0,75,6718	0/0:28,0:28:81.28:0,81,6745	0/0:39,0:39:99:0,117,10388	0/0:20,0:20:57.18:0,57,5476	1/1:7,1:8:21.01:468,21,0	0/0:13,0:13:36.12:0,36,3814	0/0:51,0:51:99:0,154,14117	0/0:19,0:19:57.20:0,57,5312	0/0:12,0:12:36.11:0,36,2861	0/0:26,0:26:75.22:0,75,7605	0/0:19,0:19:57.20:0,57,5970	0/1:22,1:23:99:142,0,5868	0/0:18,0:18:51.13:0,51,4792	0/0:11,0:11:30.10:0,30,3199
chr10	20783550	.	G	GA	2739.58	PASS	AB=0.909;AC=11;AF=0.196;AN=56;BaseQRankSum=3.762;DP=530;FS=16.722;HRun=2;HaplotypeScore=113.6186;InbreedingCoeff=0.8745;MQ=65.26;MQ0=0;MQRankSum=-1.698;QD=25.13;ReadPosRankSum=0.403;VQSLOD=2.1943;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:56.97:0,57,646	1/1:0,4:4:12.04:171,12,0	0/0:18,0:17:23.15:0,23,472	0/0:13,0:13:23.72:0,24,277	1/1:2,17:20:39.10:533,39,0	0/0:8,0:8:23.98:0,24,267	0/0:22,0:22:45.03:0,45,518	0/0:34,0:34:93.09:0,93,1045	0/0:28,0:28:51.07:0,51,609	1/1:0,21:21:57.19:811,57,0	1/1:0,9:9:27.09:384,27,0	0/0:22,0:22:54.17:0,54,665	0/0:24,0:24:56.97:0,57,704	0/0:22,0:22:60.07:0,60,708	0/0:19,0:19:42.13:0,42,520	0/0:22,0:22:60.16:0,60,717	0/0:19,0:19:54.17:0,54,667	0/0:21,0:21:57.16:0,57,687	1/1:1,24:24:69.20:964,69,0	0/0:8,0:8:18.04:0,18,209	0/0:29,0:29:68.92:0,69,854	0/0:13,0:13:30.09:0,30,376	0/0:10,0:10:17.81:0,18,222	0/0:17,0:17:42.05:0,42,487	0/0:17,0:17:45.14:0,45,555	0/1:27,3:30:53.23:53,0,737	0/0:14,0:14:42.10:0,42,492	0/0:12,0:12:29.96:0,30,322
chr10	20783590	.	CTCT	C	5317.10	PASS	AB=0.839;AC=34;AF=0.607;AN=56;BaseQRankSum=3.202;DP=390;FS=50.287;HRun=0;HaplotypeScore=108.0058;InbreedingCoeff=0.7387;MQ=52.77;MQ0=16;MQRankSum=-7.582;QD=23.63;ReadPosRankSum=-0.210;VQSLOD=2.2758;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,13:17:23.94:295,24,0	0/0:2,0:2:2.98:0,3,21	0/0:26,0:17:41.26:0,41,783	0/0:26,0:12:33.09:0,33,637	0/1:11,0:10:5.07:5,0,79	1/1:5,3:8:17.05:230,17,0	1/1:4,9:12:31.65:440,32,0	1/1:8,17:20:14.31:723,14,0	1/1:0,18:18:29.97:398,30,0	0/0:16,0:16:6.25:0,6,145	0/0:11,0:10:8.85:0,9,55	1/1:1,12:12:30.10:420,30,0	1/1:0,9:9:18.06:260,18,0	1/1:11,6:17:35.97:455,36,0	0/0:19,0:19:48:0,48,927	0/0:21,0:21:63.19:0,63,1360	0/0:12,0:11:32.70:0,33,650	0/0:15,0:15:42.09:0,42,849	0/0:17,0:7:6.36:0,6,63	1/1:0,6:6:11.77:139,12,0	1/1:17,1:14:3.49:156,3,0	1/1:3,6:9:10.20:311,10,0	1/1:2,5:7:6.02:86,6,0	1/1:6,2:7:21.02:274,21,0	1/1:0,5:5:8.90:134,9,0	0/1:11,10:18:22.27:468,0,22	1/1:1,10:10:30.10:442,30,0	1/1:9,0:9:11.82:80,12,0
chr10	20783596	.	CTCT	C	436.96	PASS	AB=0.977;AC=23;AF=0.411;AN=56;BaseQRankSum=3.436;DP=391;FS=11.764;HRun=0;HaplotypeScore=122.9253;InbreedingCoeff=0.3814;MQ=57.42;MQ0=20;MQRankSum=-7.475;QD=2.39;ReadPosRankSum=-0.766;VQSLOD=1.8005;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:15,1:16:0.87:30,0,1	0/0:1,0:1:3:0,3,27	0/0:30,0:18:34.95:0,35,453	0/0:37,0:17:16.52:0,17,497	0/0:7,0:6:11.90:0,12,112	0/1:9,0:9:2.57:11,0,3	0/1:13,0:12:13.81:48,0,14	0/1:23,2:19:6.14:158,0,6	1/1:17,0:17:5.95:50,6,0	0/0:15,0:15:22.85:0,23,280	0/0:11,0:10:8.87:0,9,57	1/1:13,0:12:10.65:49,11,0	1/1:9,0:9:8.28:32,8,0	1/1:16,0:16:0.49:39,0,0	0/0:20,0:20:47.96:0,48,766	0/0:22,0:22:61.61:0,62,1285	0/0:13,0:12:35.66:0,36,687	0/0:15,0:15:39.60:0,40,838	0/0:15,0:5:6.43:0,6,84	0/1:5,0:5:6.67:8,0,7	0/0:15,0:11:4.08:0,4,18	0/1:9,0:9:9.85:27,0,10	1/1:5,1:6:2.58:12,3,0	1/1:8,0:7:7.82:35,8,0	1/1:5,0:5:4.83:21,5,0	0/1:20,0:17:20.48:36,0,20	1/1:11,0:10:14.47:55,14,0	0/0:5,0:5:3.96:0,4,12
chr10	20783599	.	TTCC	T	399.95	PASS	AB=0.957;AC=17;AF=0.327;AN=52;BaseQRankSum=0.828;DP=379;FS=0.742;HRun=0;HaplotypeScore=115.3333;InbreedingCoeff=-0.1523;MQ=57.63;MQ0=21;MQRankSum=-5.445;QD=2.33;ReadPosRankSum=-5.694;VQSLOD=-0.3219;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:15,1:16:18.71:19,0,67	./.	0/0:30,0:15:13.77:0,14,225	0/0:43,0:18:5.32:0,5,390	0/0:6,0:6:3.01:0,3,33	0/1:7,1:7:11.15:11,0,70	0/1:13,0:12:9.39:56,0,9	0/1:23,0:16:22.65:156,0,23	0/1:14,2:16:30.22:30,0,48	0/0:12,0:12:9:0,9,104	./.	0/1:11,0:10:0.55:1,0,22	0/1:8,0:8:0.11:46,0,0	0/1:15,0:15:20.75:21,0,62	0/0:20,0:20:44.84:0,45,570	0/0:22,0:22:54.19:0,54,1103	0/0:13,0:12:36.10:0,36,653	0/0:15,0:15:39.60:0,40,784	0/0:14,0:4:0.42:0,0,16	0/1:3,1:4:10.84:11,0,21	0/0:13,0:9:3.01:0,3,33	0/1:10,0:10:30.60:31,0,44	1/1:5,0:5:2.94:18,3,0	0/1:7,0:6:5.24:27,0,5	1/1:4,0:4:2.87:15,3,0	0/1:19,0:17:27.79:28,0,75	0/1:11,1:11:7.40:75,0,7	0/0:5,0:5:8.82:0,9,68
chr10	20783605	.	C	CTCCTCT	1006.37	PASS	AB=1.000;AC=5;AF=0.104;AN=48;BaseQRankSum=-0.173;DP=361;FS=2.304;HRun=0;HaplotypeScore=127.2256;InbreedingCoeff=0.2350;MQ=58.34;MQ0=22;MQRankSum=-2.869;QD=22.36;ReadPosRankSum=-1.068;VQSLOD=2.8909;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:8.04:0,8,61	./.	0/0:34,0:11:14.29:0,14,150	0/0:50,0:19:2.18:0,2,193	0/0:4,0:4:2.92:0,3,17	0/0:8,0:7:10.82:0,11,50	0/0:12,0:11:7.93:0,8,24	0/0:20,0:13:5.76:0,6,48	0/0:11,0:11:7.65:0,8,43	0/0:10,0:10:5.98:0,6,61	./.	0/1:9,0:8:1.66:2,0,44	0/0:7,0:7:2.16:0,2,7	0/0:14,0:14:13.65:0,14,79	1/1:7,12:19:39.13:1086,39,0	0/0:23,0:23:48.13:0,48,925	0/0:12,0:12:25.61:0,26,539	0/0:16,0:16:31.98:0,32,684	0/0:12,0:2:2.92:0,3,17	0/0:2,0:2:2.96:0,3,19	0/0:10,0:6:2.86:0,3,15	0/0:10,0:10:9.64:0,10,42	./.	0/1:6,0:5:2.34:11,0,2	./.	0/0:21,0:18:5.59:0,6,67	0/1:11,0:10:7.99:14,0,8	0/0:4,0:4:8.01:0,8,51
chr10	20783614	.	CTCATCTTCT	C	918.54	PASS	AB=0.892;AC=33;AF=0.635;AN=52;BaseQRankSum=6.241;DP=318;FS=24.283;HRun=0;HaplotypeScore=118.5431;InbreedingCoeff=0.5272;MQ=58.50;MQ0=15;MQRankSum=-4.783;QD=6.29;ReadPosRankSum=-2.365;VQSLOD=-0.0308;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,1:11:11.12:62,11,0	./.	0/0:38,0:12:22.38:0,22,625	0/0:59,0:21:23.60:0,24,472	0/0:2,0:2:2.84:0,3,14	0/1:6,1:6:18.40:18,0,28	1/1:11,0:10:14.35:110,14,0	0/1:9,0:6:51.19:51,0,114	1/1:5,2:7:14.16:126,14,0	0/0:8,0:9:4.67:0,5,16	./.	1/1:8,0:7:12.91:75,13,0	1/1:5,0:5:8.11:25,8,0	1/1:12,0:12:10.71:58,11,0	0/1:12,0:16:6.66:7,0,378	0/0:22,0:22:57.19:0,57,2038	0/0:11,0:10:30.10:0,30,1052	0/0:15,0:15:39.10:0,39,1510	1/1:6,0:1:0.47:1,0,0	1/1:1,1:2:3.35:16,3,0	0/0:8,0:5:3.01:0,3,37	1/1:9,0:9:13.13:69,13,0	1/1:4,0:4:0.47:1,0,0	1/1:5,0:4:3.85:22,4,0	1/1:2,0:2:2.04:6,2,0	1/1:19,0:18:28.11:246,28,0	1/1:9,0:8:14.18:136,14,0	1/1:4,0:4:7:62,7,0
chr10	20783630	.	TCTC	T	503.90	PASS	AB=0.958;AC=25;AF=0.568;AN=44;BaseQRankSum=7.460;DP=273;FS=0.868;HRun=0;HaplotypeScore=73.3717;InbreedingCoeff=0.6020;MQ=58.44;MQ0=22;MQRankSum=-4.357;QD=6.00;ReadPosRankSum=-0.671;VQSLOD=2.1381;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,3:10:9.30:71,9,0	./.	0/0:48,0:10:22.33:0,22,522	0/0:57,0:16:36.46:0,36,448	0/0:3,0:2:0.89:0,1,2	1/1:5,1:5:10.78:45,11,0	1/1:6,0:5:8.03:59,8,0	./.	1/1:3,2:5:6.64:39,7,0	0/0:7,0:7:3.43:0,3,20	./.	1/1:2,2:4:5.90:38,6,0	./.	0/1:12,0:12:16.27:26,0,16	0/0:21,0:19:33:0,33,479	0/0:16,0:16:45.15:0,45,1060	0/0:10,0:10:15.24:0,15,419	0/0:12,0:12:30.10:0,30,709	0/1:3,0:1:0:0,0,0	1/1:0,1:1:0.47:1,0,0	0/1:5,1:3:0:0,0,0	1/1:4,3:7:4.56:47,5,0	./.	./.	1/1:0,2:2:3.01:53,3,0	1/1:5,5:10:20.85:199,21,0	1/1:3,2:4:6.01:59,6,0	1/1:4,0:4:6.42:20,6,0
chr10	20783672	.	TC	T	384.76	PASS	AB=0.833;AC=7;AF=0.125;AN=56;BaseQRankSum=0.097;DP=447;FS=6.497;HRun=2;HaplotypeScore=62.4985;InbreedingCoeff=0.0478;MQ=22.12;MQ0=118;MQRankSum=0.049;QD=3.29;ReadPosRankSum=-0.780;VQSLOD=-0.3367;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:9:12.03:0,12,147	0/0:2,0:1:2.88:0,3,15	0/0:4,0:1:3.01:0,3,42	0/0:7,1:2:6.02:0,6,79	0/1:14,3:5:5.59:69,0,6	0/1:12,2:8:39.34:39,0,112	0/0:24,1:17:34.72:0,35,378	0/0:35,0:23:54.46:0,54,648	0/0:12,0:10:24.01:0,24,310	0/0:31,1:10:14.67:0,15,88	1/1:16,1:7:4.56:43,5,0	0/0:10,1:5:6.91:0,7,86	0/0:12,0:6:9.03:0,9,127	0/0:18,1:11:11.62:0,12,172	0/0:15,0:6:5.49:0,5,34	0/0:21,0:16:30.10:0,30,412	0/0:20,0:6:12.72:0,13,211	0/0:19,0:9:20.91:0,21,277	0/1:12,2:4:32.87:33,0,37	0/0:7,0:4:3:0,3,33	0/1:15,7:11:90.16:96,0,90	0/0:14,0:11:15.41:0,15,188	0/0:9,0:6:11.88:0,12,120	0/0:16,0:4:9.03:0,9,122	0/0:11,0:9:15.29:0,15,172	0/1:25,8:19:99:230,0,220	0/0:9,0:6:5.65:0,6,76	0/0:15,0:8:11.93:0,12,122
chr10	20784883	.	A	AGG	13085.53	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=12.990;DP=598;FS=4.775;HRun=5;HaplotypeScore=122.1623;InbreedingCoeff=0.9682;MQ=77.18;MQ0=2;MQRankSum=-4.701;QD=27.96;ReadPosRankSum=0.602;VQSLOD=3.5374;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:39,1:39:99:1240,111,0	1/1:4,1:5:6.02:88,6,0	0/0:18,0:18:39.12:0,39,492	0/0:19,0:18:41.34:0,41,512	1/1:18,0:18:42.11:481,42,0	1/1:15,0:15:42.11:462,42,0	1/1:23,0:23:57.05:617,57,0	1/1:26,0:26:60.08:600,60,0	1/1:23,0:23:57.15:614,57,0	1/1:25,0:25:63.08:644,63,0	1/1:15,0:15:33.10:402,33,0	1/1:25,1:26:59.71:678,60,0	1/1:22,0:21:60.16:682,60,0	1/1:23,1:23:57.15:628,57,0	0/0:23,0:23:63.18:0,63,789	0/0:15,0:15:11.17:0,11,465	0/0:37,0:37:99:0,105,1336	0/0:18,0:18:51.15:0,51,636	1/1:21,0:21:54.10:589,54,0	1/1:12,0:12:33.10:423,33,0	1/1:42,0:42:99:1158,108,0	1/1:21,0:21:54.15:628,54,0	1/1:21,0:21:51.15:601,51,0	1/1:31,0:31:75.19:810,75,0	1/1:15,0:15:42.11:465,42,0	1/1:16,0:16:48.03:479,48,0	1/1:20,1:21:54.15:636,54,0	1/1:6,0:6:15.04:161,15,0
chr10	20784886	.	G	GGA	22949.57	PASS	AB=0.944;AC=45;AF=0.804;AN=56;BaseQRankSum=0.509;DP=627;FS=2.173;HRun=0;HaplotypeScore=94.3586;InbreedingCoeff=0.8858;MQ=74.96;MQ0=2;MQRankSum=-6.833;QD=44.74;ReadPosRankSum=1.433;VQSLOD=6.4609;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,41:42:99:2101,111,0	1/1:3,3:6:8.97:123,9,0	0/0:15,0:15:39.13:0,39,597	0/0:20,0:19:50.64:0,51,669	1/1:1,16:18:42.14:790,42,0	1/1:0,16:16:42.14:796,42,0	1/1:2,23:25:57.19:1080,57,0	1/1:2,25:27:72.20:1248,72,0	1/1:1,22:23:60.20:1119,60,0	1/1:4,23:28:75.20:1286,75,0	1/1:0,15:15:33.11:622,33,0	1/1:3,24:28:63.02:1171,63,0	1/1:1,22:24:60.20:1135,60,0	1/1:2,22:23:60.20:1115,60,0	0/0:24,0:24:72.22:0,72,1043	0/1:16,1:17:8.81:9,0,599	0/0:37,0:37:99:0,111,1658	0/0:18,0:18:54.17:0,54,804	1/1:3,20:23:66.20:1185,66,0	1/1:1,11:12:33.11:622,33,0	1/1:4,41:45:99:2046,108,0	1/1:1,21:22:54.18:1017,54,0	1/1:0,21:21:54.13:980,54,0	1/1:2,29:31:75.25:1423,75,0	1/1:1,14:16:42.14:792,42,0	1/1:0,18:18:54.16:963,54,0	1/1:2,19:23:57.19:1042,57,0	1/1:0,6:7:15.05:285,15,0
chr10	20785151	.	G	GA	15988.42	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=12.376;DP=592;FS=0.000;HRun=4;HaplotypeScore=123.3323;InbreedingCoeff=0.9932;MQ=81.26;MQ0=0;MQRankSum=-3.968;QD=34.53;ReadPosRankSum=1.318;VQSLOD=3.6480;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,49:50:99:1778,135,0	1/1:1,10:11:33.11:448,33,0	0/0:16,0:16:42.09:0,42,456	0/0:19,0:19:45.98:0,46,489	1/1:1,15:16:33.11:451,33,0	1/1:3,14:17:39.07:533,39,0	1/1:1,31:32:78.15:1022,78,0	1/1:3,26:29:81.23:1085,81,0	1/1:3,18:21:60.13:793,60,0	1/1:0,21:21:57.15:758,57,0	1/1:2,12:14:30.06:389,30,0	1/1:2,21:23:66.18:877,66,0	1/1:3,23:26:66.14:849,66,0	1/1:0,14:14:42.05:528,42,0	0/0:30,0:30:90.23:0,90,1002	0/0:15,0:15:42.12:0,42,476	0/0:30,0:30:87.22:0,87,968	0/0:19,0:19:54.15:0,54,613	1/1:3,15:18:48.13:621,48,0	1/1:1,10:11:27.09:369,27,0	1/1:0,27:27:72.24:984,72,0	1/1:3,13:17:42.10:545,42,0	1/1:2,16:18:39.13:533,39,0	1/1:0,36:36:99:1327,99,0	1/1:1,11:12:30.10:410,30,0	1/1:2,20:22:57.18:764,57,0	1/1:4,19:23:57.15:757,57,0	1/1:2,3:5:12.04:167,12,0
chr10	20785234	.	A	AC	5474.68	PASS	AB=0.973;AC=42;AF=0.750;AN=56;BaseQRankSum=6.745;DP=755;FS=1.072;HRun=0;HaplotypeScore=179.7717;InbreedingCoeff=0.8190;MQ=73.74;MQ0=0;MQRankSum=-6.353;QD=9.12;ReadPosRankSum=-3.644;VQSLOD=4.3741;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:45,2:47:41.80:333,42,0	1/1:14,0:14:27.84:123,28,0	0/0:30,0:30:87.16:0,87,1084	0/0:16,0:16:44.84:0,45,515	1/1:12,0:12:27.35:131,27,0	1/1:26,0:26:22.45:223,22,0	1/1:29,2:31:30.18:344,30,0	1/1:35,0:35:66.21:426,66,0	1/1:28,1:29:43.30:312,43,0	1/1:27,0:27:59.48:374,59,0	1/1:16,0:16:16.91:134,17,0	1/1:25,2:27:32.69:292,33,0	1/1:28,1:29:28.09:261,28,0	1/1:32,3:35:13.87:263,14,0	0/0:34,0:34:99:0,102,1380	0/0:22,0:22:66.21:0,66,892	0/0:37,0:37:99:0,111,1499	0/0:16,0:16:48.13:0,48,635	1/1:24,0:24:62.91:352,63,0	1/1:30,2:32:24.01:315,24,0	0/1:12,0:12:6.03:65,0,6	1/1:35,0:35:24.09:247,24,0	0/1:33,2:35:14.83:209,0,15	1/1:25,0:25:28.73:193,29,0	1/1:34,3:37:20.59:256,21,0	1/1:26,1:27:33.19:243,33,0	1/1:28,4:32:39.06:314,39,0	1/1:13,0:13:14.86:65,15,0
chr10	20785239	.	C	CAAAACAAAACAAAACAAAACAAAACAAAA	113396.94	PASS	AB=0.993;AC=37;AF=0.661;AN=56;BaseQRankSum=5.005;DP=759;FS=5.890;HRun=0;HaplotypeScore=595.1245;InbreedingCoeff=0.6140;MQ=75.95;MQ0=0;MQRankSum=-17.389;QD=192.85;ReadPosRankSum=0.294;VQSLOD=3.6997;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:48,1:49:99:9873,126,0	0/0:13,0:13:19.94:0,20,1574	0/0:32,0:32:86.43:0,86,2835	0/0:18,0:18:44.96:0,45,1387	0/1:13,0:13:99:184,0,657	1/1:24,0:24:71.18:6520,71,0	1/1:33,0:33:73.92:5029,74,0	1/1:37,0:37:94.71:5027,95,0	1/1:27,1:28:84.18:7815,84,0	0/1:26,0:26:7.87:8,0,3447	0/1:16,0:16:96.56:97,0,1389	1/1:28,1:29:76.55:6620,77,0	1/1:28,1:29:84.07:8298,84,0	1/1:32,2:34:99:8393,99,0	0/0:33,0:33:96.30:0,96,5991	0/0:20,0:20:60.19:0,60,3960	0/0:38,0:38:99:0,114,7526	0/0:17,0:17:45.09:0,45,2662	0/1:23,0:23:18.85:19,0,2284	1/1:31,1:32:90.26:7929,90,0	1/1:11,0:11:21:1015,21,0	1/1:35,0:35:99:7321,105,0	1/1:34,2:36:99:8267,104,0	1/1:28,0:28:65.90:4774,66,0	1/1:33,2:35:94.56:8970,95,0	0/1:25,1:26:57.61:6407,0,58	1/1:28,3:31:93.30:8638,93,0	1/1:13,0:13:39.13:2194,39,0
chr10	20785628	.	T	TAA	4457.29	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=8.196;DP=642;FS=2.863;HRun=9;HaplotypeScore=91.7414;InbreedingCoeff=0.9987;MQ=78.24;MQ0=0;MQRankSum=0.175;QD=37.14;ReadPosRankSum=-2.775;VQSLOD=4.1155;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:81.18:0,81,854	1/1:1,14:15:39.13:600,39,0	0/0:23,0:22:40.72:0,41,421	0/0:11,0:10:19.87:0,20,187	1/1:5,29:35:89.34:1230,89,0	0/0:23,0:23:60.10:0,60,622	0/0:24,0:24:72.14:0,72,748	0/0:22,0:22:57.12:0,57,607	0/0:17,0:17:39.07:0,39,404	1/1:1,20:22:65.71:968,66,0	1/1:3,20:24:59.48:831,59,0	0/0:23,0:23:57.08:0,57,590	0/0:17,0:17:48.08:0,48,498	0/0:26,0:27:60.08:0,60,692	0/0:27,0:27:69.15:0,69,726	0/0:22,0:23:48.06:0,48,566	0/0:31,0:31:78.13:0,78,811	0/0:21,0:22:62.87:0,63,641	1/1:4,19:24:60.11:828,60,0	0/0:16,0:16:38.96:0,39,398	0/0:25,0:25:57.09:0,57,607	0/0:16,0:16:39.09:0,39,414	0/0:24,0:24:54.12:0,54,571	0/0:23,0:23:63.15:0,63,670	0/0:23,0:23:56.13:0,56,602	0/0:28,0:28:60.11:0,60,638	0/0:16,0:16:42.07:0,42,438	0/0:30,0:30:69.11:0,69,732
chr10	20786009	.	CT	C	993.99	PASS	AB=1.000;AC=43;AF=0.768;AN=56;BaseQRankSum=6.632;DP=589;FS=0.523;HRun=15;HaplotypeScore=96.6008;InbreedingCoeff=0.3935;MQ=70.99;MQ0=9;MQRankSum=0.025;QD=2.11;ReadPosRankSum=2.998;VQSLOD=-0.2732;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:31,0:31:17.79:41,0,18	1/1:10,0:10:15.96:45,16,0	0/0:50,0:16:10.17:0,10,97	0/1:36,0:13:11.09:11,0,35	0/1:29,0:29:4.67:46,0,5	1/1:19,0:19:14.41:38,14,0	1/1:17,0:17:15.13:40,15,0	1/1:26,0:27:31.83:123,32,0	1/1:12,0:12:18.66:53,19,0	1/1:21,0:21:22.81:69,23,0	1/1:20,0:20:31.28:93,31,0	1/1:19,0:19:9.99:29,10,0	1/1:20,0:20:6.69:37,7,0	0/1:28,0:27:6.10:16,0,6	1/1:10,5:16:31.31:181,31,0	0/0:14,1:16:12.75:0,13,244	0/0:17,2:22:3.03:0,3,283	0/0:26,1:28:13.37:0,13,355	1/1:19,0:19:16.52:64,17,0	1/1:15,0:15:12.60:44,13,0	1/1:19,0:19:11.25:30,11,0	1/1:14,0:14:4.23:12,4,0	1/1:16,0:16:10.81:28,11,0	1/1:23,0:23:16.48:45,16,0	1/1:12,0:12:2.31:9,2,0	1/1:16,0:16:11.02:34,11,0	0/1:17,0:17:14.76:36,0,15	1/1:16,0:16:13.95:36,14,0
chr10	20786021	.	TTTTC	T	1643.98	PASS	AB=0.985;AC=19;AF=0.339;AN=56;BaseQRankSum=-0.421;DP=574;FS=8.241;HRun=0;HaplotypeScore=117.0174;InbreedingCoeff=0.3264;MQ=72.94;MQ0=9;MQRankSum=1.204;QD=6.07;ReadPosRankSum=-2.782;VQSLOD=1.1951;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:29:15.94:16,0,168	1/1:12,0:12:28.92:160,29,0	0/0:61,0:20:54.99:0,55,530	0/0:34,0:10:27.01:0,27,307	1/1:30,0:30:55.58:321,56,0	0/0:18,0:18:8.95:0,9,90	0/1:16,0:16:20.29:35,0,20	0/1:25,1:26:99:117,0,139	0/1:12,0:12:23.59:24,0,42	1/1:24,0:24:60.53:404,61,0	1/1:24,0:24:54.97:318,55,0	0/0:18,0:18:17.38:0,17,115	0/0:18,0:18:23.77:0,24,132	0/0:19,0:18:18.27:0,18,132	0/0:15,0:15:41.15:0,41,577	0/0:16,0:16:46.67:0,47,883	0/0:22,0:22:63.17:0,63,1265	0/0:22,0:22:50.83:0,51,1395	1/1:17,0:17:16.11:141,16,0	0/1:16,2:18:29.42:123,0,29	0/0:13,1:14:19.17:0,19,109	0/1:12,0:12:0.88:40,0,1	0/1:15,0:15:4.76:5,0,18	0/0:24,0:24:16.97:0,17,61	0/0:9,0:9:12.19:0,12,64	0/1:17,0:17:42.99:103,0,43	0/1:19,0:19:23.51:24,0,162	0/0:13,0:13:13.99:0,14,40
chr10	20786022	.	TTTC	T	5001.85	PASS	AB=0.974;AC=37;AF=0.661;AN=56;BaseQRankSum=5.420;DP=572;FS=22.540;HRun=0;HaplotypeScore=96.1948;InbreedingCoeff=0.4260;MQ=73.79;MQ0=9;MQRankSum=0.652;QD=12.50;ReadPosRankSum=4.051;VQSLOD=2.6542;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:28,1:29:49.84:130,0,50	1/1:1,11:12:30:391,30,0	0/0:60,0:19:37.81:0,38,413	0/0:36,0:12:32.83:0,33,274	1/1:1,27:28:64.37:668,64,0	1/1:15,1:16:23.73:123,24,0	1/1:17,0:17:23.67:107,24,0	1/1:25,2:27:0.75:267,1,0	1/1:11,1:12:17.93:157,18,0	1/1:1,22:23:65.88:740,66,0	1/1:3,20:24:65.66:746,66,0	0/1:17,0:17:23.50:49,0,23	0/1:18,0:18:14.70:60,0,15	0/1:19,0:18:42.87:53,0,43	0/0:16,0:16:17.88:0,18,400	0/0:16,0:16:38.93:0,39,700	0/0:22,0:22:63.12:0,63,1009	0/0:22,0:22:21.45:0,21,1104	1/1:1,14:15:44.66:530,45,0	1/1:21,0:21:23.54:190,24,0	0/1:14,0:14:6.81:38,0,7	1/1:12,0:12:19.46:102,19,0	1/1:14,0:14:23.75:106,24,0	1/1:25,0:25:18.45:81,18,0	0/1:9,0:9:8.57:26,0,9	1/1:17,0:17:14.98:199,15,0	0/1:14,3:17:35.36:152,0,35	1/1:14,0:14:23.37:88,23,0
chr10	20786023	.	TTC	T	7420.15	PASS	AB=0.538;AC=43;AF=0.768;AN=56;BaseQRankSum=2.941;DP=567;FS=14.667;HRun=0;HaplotypeScore=79.7194;InbreedingCoeff=0.8321;MQ=73.98;MQ0=9;MQRankSum=-2.680;QD=18.74;ReadPosRankSum=3.004;VQSLOD=3.6799;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:4,24:28:1.26:396,0,1	1/1:12,0:12:29.85:227,30,0	0/0:59,0:19:3.30:0,3,341	0/0:36,0:12:21.37:0,21,167	1/1:27,1:28:63.51:457,64,0	1/1:1,14:15:27.07:325,27,0	1/1:2,15:17:27.07:323,27,0	1/1:6,21:27:68.07:636,68,0	1/1:7,5:12:34.49:347,34,0	1/1:22,1:23:65.47:521,65,0	1/1:22,2:24:64.51:448,65,0	1/1:2,14:16:20.94:240,21,0	1/1:1,17:18:4.13:310,4,0	1/1:2,17:18:5.60:277,6,0	0/0:16,0:16:15.48:0,15,226	0/0:16,0:16:47.63:0,48,543	0/0:22,0:22:62.70:0,63,757	0/0:22,0:22:36.56:0,37,827	1/1:14,1:15:43.98:338,44,0	1/1:3,18:21:41.02:364,41,0	1/1:3,10:13:20.05:233,20,0	1/1:0,12:12:20.49:186,20,0	1/1:0,14:14:26.57:301,27,0	1/1:1,24:25:29.31:346,29,0	1/1:2,7:9:8.14:145,8,0	1/1:2,15:17:40.98:419,41,0	1/1:13,4:17:10.49:240,10,0	1/1:1,13:14:27.09:339,27,0
chr10	20786024	.	TC	T	4780.97	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=6.202;DP=565;FS=11.226;HRun=5;HaplotypeScore=82.6420;InbreedingCoeff=0.9852;MQ=75.66;MQ0=9;MQRankSum=-0.786;QD=12.20;ReadPosRankSum=1.752;VQSLOD=2.5705;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:28:35.23:219,35,0	1/1:12,0:12:29.42:181,29,0	0/0:56,0:19:23.77:0,24,313	0/0:37,0:14:15.93:0,16,157	1/1:28,0:28:58.58:364,59,0	1/1:15,0:15:26.48:166,26,0	1/1:16,1:17:26.49:165,26,0	1/1:26,0:26:52.68:352,53,0	1/1:11,2:13:38.58:290,39,0	1/1:23,0:23:62.35:451,62,0	1/1:24,0:24:58.71:355,59,0	1/1:14,1:15:20.59:125,21,0	1/1:18,0:18:26.43:163,26,0	1/1:19,0:18:23.55:146,24,0	0/0:17,0:17:35.49:0,35,200	0/0:16,0:16:35.48:0,35,341	0/0:21,0:21:54.67:0,55,498	0/0:23,0:23:30.78:0,31,529	1/1:15,0:15:37.20:234,37,0	1/1:21,0:21:38.21:236,38,0	1/1:11,1:12:20.66:144,21,0	1/1:12,0:12:20.62:128,21,0	1/1:14,0:14:26.52:167,27,0	1/1:24,1:25:29.49:200,29,0	1/1:9,0:9:11.77:74,12,0	1/1:16,0:16:41.52:287,42,0	1/1:9,6:16:25.83:168,26,0	1/1:14,0:14:26.48:166,26,0
chr10	20786183	.	TC	T	4085.51	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=2.720;DP=373;FS=13.371;HRun=7;HaplotypeScore=61.5453;InbreedingCoeff=0.9408;MQ=71.63;MQ0=1;MQRankSum=-0.928;QD=18.83;ReadPosRankSum=1.324;VQSLOD=2.1749;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,9:12:18.04:183,18,0	0/0:4,0:4:2.96:0,3,19	0/0:13,0:9:12.29:0,12,177	0/0:15,0:13:21.58:0,22,227	0/0:16,0:16:35.47:0,35,255	1/1:0,11:11:24.05:245,24,0	1/1:3,24:27:48.10:487,48,0	1/1:6,4:10:9.02:92,9,0	1/1:2,9:11:26.97:274,27,0	0/0:9,0:9:23.20:0,23,133	0/0:10,0:10:26.36:0,26,164	1/1:6,7:13:31.28:275,31,0	1/1:10,11:21:48.06:472,48,0	1/1:1,10:11:15.03:153,15,0	0/0:16,0:16:42.13:0,42,524	0/0:15,0:15:42.11:0,42,513	0/0:32,0:32:81.24:0,81,993	0/0:15,0:15:42.05:0,42,484	0/0:10,0:10:17.53:0,18,132	1/1:2,6:8:18.03:176,18,0	1/1:3,19:22:45.06:448,45,0	1/1:1,6:7:14.86:152,15,0	1/1:2,6:8:12.02:122,12,0	1/1:2,13:15:21.05:214,21,0	1/1:0,12:12:18.04:182,18,0	1/1:2,5:7:12.02:122,12,0	1/1:2,11:13:30.06:304,30,0	1/1:1,8:9:18.04:184,18,0
chr10	20786309	.	GC	G	12402.36	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=7.197;DP=531;FS=5.584;HRun=5;HaplotypeScore=60.5331;InbreedingCoeff=0.9835;MQ=86.70;MQ0=0;MQRankSum=-4.712;QD=29.89;ReadPosRankSum=3.306;VQSLOD=5.5452;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,31:34:93.27:1055,93,0	1/1:0,5:5:15.04:169,15,0	0/0:14,0:14:36.11:0,36,476	0/0:27,0:27:69.22:0,69,910	1/1:2,12:14:30.08:340,30,0	1/1:2,7:9:21.06:238,21,0	1/1:1,38:39:99:1191,105,0	1/1:2,17:19:51.14:576,51,0	1/1:2,13:15:42.10:467,42,0	1/1:0,15:15:45.10:498,45,0	1/1:0,8:8:24.07:272,24,0	1/1:4,19:23:66.16:728,66,0	1/1:0,17:17:51.15:578,51,0	1/1:4,15:19:57.13:625,57,0	1/1:1,16:17:42.12:476,42,0	0/0:10,0:10:30.09:0,30,395	0/0:47,0:47:99:0,138,1869	0/0:18,0:18:54.18:0,54,739	1/1:2,13:15:39.08:430,39,0	1/1:0,5:5:12.03:136,12,0	1/1:3,55:58:99:1767,156,0	1/1:0,10:10:21.06:238,21,0	1/1:1,8:9:21.06:238,21,0	1/1:3,31:34:90.25:1018,90,0	1/1:3,11:14:36.09:399,36,0	1/1:0,16:16:42.10:464,42,0	1/1:1,9:10:27.08:305,27,0	1/1:5,5:10:18.03:194,18,0
chr10	20786388	.	A	AC	11073.96	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-11.003;DP=505;FS=1.614;HRun=4;HaplotypeScore=56.8507;InbreedingCoeff=0.9806;MQ=81.48;MQ0=0;MQRankSum=-2.343;QD=34.50;ReadPosRankSum=1.135;VQSLOD=5.4015;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,24:28:72.24:980,72,0	0/0:7,0:7:18.05:0,18,202	0/0:14,0:15:39.09:0,39,428	0/0:12,0:12:33.03:0,33,345	0/0:13,0:13:33.09:0,33,373	1/1:1,15:16:39.13:533,39,0	1/1:5,29:34:72.24:985,72,0	1/1:0,11:11:30.10:410,30,0	1/1:2,23:25:69.22:929,69,0	0/0:12,0:12:33.09:0,33,374	0/0:9,0:9:27.08:0,27,305	1/1:2,20:22:54.18:729,54,0	1/1:2,17:19:51.17:697,51,0	1/1:1,16:17:45.15:606,45,0	0/0:21,0:21:51.15:0,51,579	0/0:15,0:15:45.13:0,45,510	0/0:39,0:39:99:0,102,1144	0/0:24,0:24:63.18:0,63,714	0/0:17,0:17:42.12:0,42,475	1/1:1,5:6:5.98:61,6,0	1/1:7,30:37:96.04:1280,96,0	1/1:2,5:7:15.05:199,15,0	1/1:2,7:9:24.08:325,24,0	1/1:2,32:34:90.30:1231,90,0	1/1:1,8:9:24.05:309,24,0	1/1:2,12:14:42.14:569,42,0	1/1:2,19:21:54.18:738,54,0	1/1:1,11:12:36.12:492,36,0
chr10	20787762	.	T	TC	2999.10	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-9.393;DP=577;FS=2.624;HRun=0;HaplotypeScore=167.2367;InbreedingCoeff=0.9640;MQ=74.94;MQ0=3;MQRankSum=6.044;QD=32.96;ReadPosRankSum=2.024;VQSLOD=3.3206;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:77.70:0,78,642	1/1:0,5:5:15.05:219,15,0	0/0:48,0:27:5.89:0,6,453	0/0:29,0:20:42.54:0,43,391	1/1:0,31:31:75.09:1020,75,0	0/0:17,0:17:47.90:0,48,401	0/0:23,0:23:62.88:0,63,560	0/0:18,0:18:50.92:0,51,464	0/0:12,0:12:32.93:0,33,286	1/1:1,19:19:57.11:753,57,0	1/1:1,18:19:50.91:665,51,0	0/0:19,0:19:53.72:0,54,445	0/0:12,0:12:35.97:0,36,319	0/0:24,0:24:71.77:0,72,589	0/0:22,0:22:63.19:0,63,849	0/0:25,0:25:75.03:0,75,942	0/0:38,0:38:99:0,114,1539	0/0:16,0:16:41.29:0,41,510	1/1:0,16:16:39.10:516,39,0	0/0:23,0:23:50.94:0,51,443	0/0:11,0:11:29.84:0,30,242	0/0:12,0:12:23.92:0,24,195	0/0:13,0:13:35.99:0,36,324	0/0:15,0:15:34.23:0,34,316	0/0:21,0:21:56.81:0,57,489	0/0:20,0:20:37.92:0,38,409	0/0:30,0:30:80.92:0,81,710	0/0:6,0:6:11.99:0,12,103
chr10	20787766	.	TG	T	8473.56	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=11.084;DP=549;FS=4.715;HRun=2;HaplotypeScore=142.9354;InbreedingCoeff=0.9818;MQ=75.49;MQ0=3;MQRankSum=-11.707;QD=28.92;ReadPosRankSum=-2.563;VQSLOD=3.6729;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,23:30:63:725,63,0	0/0:5,0:5:15.03:0,15,152	0/0:46,1:27:27.04:0,27,532	0/0:26,0:18:12.78:0,13,232	0/0:31,0:30:71.94:0,72,722	1/1:3,15:18:48.06:563,48,0	1/1:4,17:21:48.09:584,48,0	1/1:4,13:17:42.88:534,43,0	1/1:4,8:12:33.05:378,33,0	0/0:21,0:20:57.52:0,58,602	0/0:18,0:18:51.04:0,51,527	1/1:4,13:17:45.09:544,45,0	1/1:4,10:14:42.06:482,42,0	1/1:4,20:24:66.18:815,66,0	0/0:21,0:21:63.18:0,63,843	0/0:23,0:23:66.18:0,66,881	0/0:35,0:35:99:0,105,1446	0/0:14,0:14:39.07:0,39,480	0/0:13,0:13:33.07:0,33,365	1/1:5,18:23:51.06:598,51,0	1/1:1,9:10:15.05:189,15,0	1/1:3,9:12:26.09:287,26,0	1/1:2,8:10:30.07:357,30,0	1/1:5,9:14:18.80:285,19,0	1/1:5,19:24:56.90:603,57,0	1/1:3,13:16:41.99:496,42,0	1/1:5,23:28:78.18:955,78,0	1/1:2,1:3:8.95:80,9,0
chr10	20787779	.	AG	A	7246.14	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=12.318;DP=512;FS=6.568;HRun=5;HaplotypeScore=144.0779;InbreedingCoeff=0.9784;MQ=71.38;MQ0=2;MQRankSum=-12.729;QD=24.65;ReadPosRankSum=-1.125;VQSLOD=2.8269;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,27:32:54.13:600,54,0	0/0:6,0:6:15.05:0,15,204	0/0:36,0:21:37.93:0,38,474	0/0:23,1:18:15.66:0,16,416	0/0:25,0:24:60.18:0,60,801	1/1:2,19:21:42.12:476,42,0	1/1:3,18:21:33.09:374,33,0	1/1:2,17:19:51.13:570,51,0	1/1:1,12:13:36.10:408,36,0	0/0:19,0:19:54.18:0,54,730	0/0:15,0:15:45.15:0,45,615	1/1:0,15:15:39.11:442,39,0	1/1:1,10:11:27.08:306,27,0	1/1:2,22:24:60.17:677,60,0	0/0:16,0:16:42.14:0,42,575	0/0:20,0:20:60.20:0,60,821	0/0:35,0:35:99:0,100,1355	0/0:11,0:11:33.11:0,33,451	0/0:10,0:10:30.10:0,30,407	1/1:2,20:22:39.11:440,39,0	1/1:2,6:8:6.02:68,6,0	1/1:0,13:13:27.08:306,27,0	1/1:0,10:10:21.06:238,21,0	1/1:3,13:16:26.87:306,27,0	1/1:0,24:24:60.17:680,60,0	1/1:0,14:14:39.11:440,39,0	1/1:1,24:25:63.18:713,63,0	1/1:0,6:6:18.05:204,18,0
chr10	20787892	.	CT	C	6536.89	PASS	AB=0.972;AC=38;AF=0.679;AN=56;BaseQRankSum=10.407;DP=546;FS=4.933;HRun=9;HaplotypeScore=146.4480;InbreedingCoeff=0.8399;MQ=74.18;MQ0=0;MQRankSum=-8.210;QD=18.41;ReadPosRankSum=0.114;VQSLOD=3.4083;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,25:27:60.02:548,60,0	0/0:11,0:11:31.78:0,32,173	0/0:32,0:19:33.79:0,34,278	0/1:28,0:21:22.06:22,0,163	0/0:27,0:27:69.20:0,69,367	1/1:1,14:16:38.97:348,39,0	1/1:3,12:15:33.01:301,33,0	1/1:4,19:23:56.91:503,57,0	1/1:2,7:9:18:164,18,0	0/0:15,0:15:30.20:0,30,154	0/0:17,0:17:49.24:0,49,286	1/1:1,14:15:35.93:318,36,0	1/1:3,11:14:27.01:246,27,0	1/1:0,11:11:27.01:247,27,0	1/1:1,19:20:45.02:412,45,0	0/0:20,0:22:53.99:0,54,596	0/0:39,0:39:99:0,108,1226	0/0:28,0:28:69.17:0,69,772	0/1:16,1:17:10.27:10,0,105	1/1:2,16:18:45.01:411,45,0	1/1:2,16:18:33.02:302,33,0	1/1:0,10:10:30.02:274,30,0	1/1:1,16:17:45:405,45,0	1/1:2,20:22:50.89:447,51,0	1/1:3,23:26:62.93:564,63,0	1/1:3,19:22:33.41:421,33,0	1/1:1,19:20:51.03:466,51,0	1/1:2,4:6:14.95:128,15,0
chr10	20787920	.	G	GT	2360.13	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-4.826;DP=562;FS=9.997;HRun=7;HaplotypeScore=153.7214;InbreedingCoeff=0.9787;MQ=72.51;MQ0=1;MQRankSum=1.658;QD=29.14;ReadPosRankSum=0.764;VQSLOD=1.7379;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:54.05:0,54,513	1/1:1,11:12:33.10:390,33,0	0/0:41,0:21:30.01:0,30,286	0/0:36,1:31:14.25:0,14,363	1/1:5,22:27:66.20:791,66,0	0/0:18,0:18:48.07:0,48,463	0/0:15,0:15:39.05:0,39,375	0/0:31,0:31:78.01:0,78,728	0/0:9,0:9:27.04:0,27,260	1/1:3,7:10:24.07:282,24,0	1/1:0,18:18:48.15:580,48,0	0/0:13,0:13:35.09:0,35,325	0/0:11,0:11:27.04:0,27,261	0/0:15,0:15:39.05:0,39,371	0/0:17,0:17:42.07:0,42,406	0/0:24,0:24:57.07:0,57,546	0/0:38,0:38:99:0,99,956	0/0:26,0:26:71.95:0,72,680	1/1:0,14:14:42.10:493,42,0	0/0:17,0:17:45.07:0,45,434	0/0:16,0:16:42.06:0,42,403	0/0:8,0:8:21.03:0,21,203	0/0:17,0:17:39.06:0,39,376	0/0:19,0:19:54.09:0,54,520	0/0:25,0:25:63.08:0,63,602	0/0:15,1:16:8.86:0,9,369	0/0:30,0:30:66.08:0,66,630	0/0:9,0:9:21.03:0,21,202
chr10	20788078	.	T	TA	9457.87	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-3.854;DP=470;FS=0.449;HRun=8;HaplotypeScore=63.3643;InbreedingCoeff=0.9710;MQ=71.23;MQ0=0;MQRankSum=-0.678;QD=25.29;ReadPosRankSum=-0.142;VQSLOD=5.3938;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,21:23:57.10:640,57,0	1/1:7,0:7:17.10:86,17,0	0/0:11,0:10:11.70:0,12,78	0/0:7,0:6:8.73:0,9,61	1/1:28,0:28:57.15:292,57,0	1/1:3,16:19:48.14:555,48,0	1/1:0,20:20:57.17:660,57,0	1/1:5,25:30:75.15:815,75,0	1/1:0,19:19:48.14:556,48,0	1/1:11,0:11:28.75:146,29,0	1/1:16,0:16:34.40:175,34,0	1/1:0,12:12:30.09:347,30,0	1/1:0,15:15:39.12:451,39,0	1/1:1,19:20:51.15:590,51,0	0/0:16,0:16:45.01:0,45,407	0/0:18,0:18:47.99:0,48,430	0/0:26,0:26:78.02:0,78,704	0/0:18,0:18:54:0,54,486	1/1:15,0:15:33.63:173,34,0	1/1:3,14:17:39.08:436,39,0	1/1:2,12:14:30.09:347,30,0	1/1:0,4:4:12.04:139,12,0	1/1:4,15:19:42.12:483,42,0	1/1:0,14:14:39.07:436,39,0	1/1:0,26:26:75.22:868,75,0	1/1:2,18:20:56.57:602,57,0	1/1:1,16:17:36.11:417,36,0	1/1:0,8:8:21.06:243,21,0
chr10	20788085	.	A	AAAT	4294.67	PASS	AB=0.952;AC=11;AF=0.196;AN=56;BaseQRankSum=-5.430;DP=488;FS=1.484;HRun=0;HaplotypeScore=101.2523;InbreedingCoeff=0.8532;MQ=67.50;MQ0=0;MQRankSum=-2.058;QD=39.04;ReadPosRankSum=-3.088;VQSLOD=5.1601;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:11.50:0,12,111	1/1:0,8:10:21.07:449,21,0	0/0:8,0:7:13.80:0,14,126	0/0:6,0:5:9.50:0,9,113	1/1:3,28:33:71.98:1340,72,0	0/0:18,0:18:38.52:0,39,139	0/0:20,0:20:42.18:0,42,133	0/0:29,0:29:54.51:0,55,263	0/0:20,0:20:35.52:0,36,112	1/1:0,12:13:39.10:769,39,0	1/1:2,13:16:36.12:800,36,0	0/0:13,0:13:25.21:0,25,98	0/0:16,0:16:31.86:0,32,118	0/0:19,0:19:27.39:0,27,101	0/0:15,0:15:45.15:0,45,718	0/0:20,0:20:60.17:0,60,872	0/0:30,0:30:87.25:0,87,1307	0/0:18,0:18:54.18:0,54,857	1/1:2,14:18:48.07:891,48,0	0/0:16,0:16:32.80:0,33,138	0/0:14,0:14:28.20:0,28,122	0/0:6,0:6:11.86:0,12,49	0/0:18,0:19:20.61:0,21,119	0/0:14,0:14:29.63:0,30,105	0/0:29,0:29:61.48:0,61,222	0/1:19,1:20:45.44:45,0,116	0/0:18,0:18:26.64:0,27,84	0/0:8,0:8:15.36:0,15,48
chr10	20788942	.	T	TA	17523.60	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-14.807;DP=690;FS=3.364;HRun=1;HaplotypeScore=97.0238;InbreedingCoeff=0.9962;MQ=76.72;MQ0=0;MQRankSum=-0.385;QD=40.38;ReadPosRankSum=1.330;VQSLOD=5.1227;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,40:41:99:1663,111,0	0/0:9,0:9:27.08:0,27,336	0/0:14,0:14:32.47:0,32,352	0/0:12,0:12:13.02:0,13,179	0/0:31,0:31:93.28:0,93,1189	1/1:0,21:21:57.19:854,57,0	1/1:0,22:22:57.19:854,57,0	1/1:1,31:32:93.31:1390,93,0	1/1:1,19:20:45.15:674,45,0	0/0:40,0:40:99:0,117,1515	0/0:25,0:25:72.23:0,72,923	1/1:0,36:36:99:1529,102,0	1/1:0,21:21:60.20:899,60,0	1/1:0,27:27:72.24:1079,72,0	0/0:33,0:33:99:0,99,1271	0/0:29,0:29:84.25:0,84,1063	0/0:19,0:19:57.16:0,57,723	0/0:24,0:24:69.22:0,69,896	0/0:20,0:20:57.17:0,57,727	1/1:0,24:24:66.22:989,66,0	1/1:0,24:24:57.19:854,57,0	1/1:2,28:30:81.27:1214,81,0	1/1:0,15:15:39.13:584,39,0	1/1:2,22:24:60.20:899,60,0	1/1:0,30:30:78.26:1169,78,0	1/1:1,24:25:72.24:1078,72,0	1/1:1,30:31:90.30:1346,90,0	1/1:1,10:11:30.10:450,30,0
chr10	20789736	.	G	GA	637.50	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-4.481;DP=584;FS=0.927;HRun=0;HaplotypeScore=62.9044;InbreedingCoeff=0.9965;MQ=91.28;MQ0=0;MQRankSum=-2.220;QD=33.55;ReadPosRankSum=1.754;VQSLOD=3.3068;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,102,1364	0/0:9,0:9:27.09:0,27,377	0/0:20,0:20:51.10:0,51,727	0/0:29,0:29:78.95:0,79,887	0/0:10,0:10:30.10:0,30,418	0/0:17,0:17:48.16:0,48,668	0/0:34,0:34:99:0,102,1359	0/0:27,0:27:75.22:0,75,994	0/0:18,0:18:48.15:0,48,653	0/0:22,0:22:66.09:0,66,864	0/0:12,0:12:36.11:0,36,487	0/0:27,0:27:81.25:0,81,1098	0/0:25,0:25:75.15:0,75,948	0/0:25,0:25:75.18:0,75,975	1/1:1,18:19:48.16:732,48,0	0/0:25,0:25:75.23:0,75,1012	0/0:29,0:29:87.29:0,87,1214	0/0:25,0:25:72.23:0,72,982	0/0:11,0:11:30.09:0,30,389	0/0:17,0:17:48.16:0,48,670	0/0:19,0:19:57.19:0,57,796	0/0:12,0:12:33.08:0,33,432	0/0:9,0:9:27.09:0,27,371	0/0:23,0:23:63.21:0,63,880	0/0:16,0:16:47.37:0,47,628	0/0:25,0:25:75.21:0,75,967	0/0:26,0:26:78.25:0,78,1063	0/0:16,0:16:48.16:0,48,669
chr10	20789921	.	ACACACACACACT	A	2788.55	PASS	AB=0.995;AC=24;AF=0.429;AN=56;BaseQRankSum=3.183;DP=605;FS=5.718;HRun=0;HaplotypeScore=165.7156;InbreedingCoeff=-0.0704;MQ=57.82;MQ0=16;MQRankSum=-2.232;QD=7.72;ReadPosRankSum=0.136;VQSLOD=2.4427;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:36,0:36:99:278,0,205	0/1:4,0:4:18.94:19,0,94	0/0:36,0:17:31.17:0,31,551	0/0:44,0:22:49.68:0,50,695	0/1:14,0:14:73.67:106,0,74	1/1:16,0:16:4.96:104,5,0	0/1:20,0:18:12.70:266,0,13	0/1:20,0:20:31.35:306,0,31	1/1:19,1:20:13.91:366,14,0	0/1:19,0:19:9.38:9,0,1124	0/1:5,0:5:39.90:40,0,83	0/1:21,0:21:9.60:10,0,154	0/1:22,2:24:46.29:541,0,46	0/0:17,0:17:9.46:0,9,78	0/1:20,0:20:4.73:93,0,5	0/0:25,0:25:72.07:0,72,2340	0/0:44,0:44:99:0,122,3790	0/0:21,0:20:45.81:0,46,1530	0/1:15,0:15:99:116,0,502	1/1:13,0:12:10.16:83,10,0	0/1:52,0:52:35.82:36,0,58	0/0:14,0:14:9:0,9,102	0/0:16,0:14:2.93:0,3,25	0/0:26,0:26:12.23:0,12,115	1/1:17,1:18:9.03:217,9,0	0/1:15,0:14:77.72:221,0,78	1/1:20,0:18:8.43:124,8,0	0/1:9,0:9:29.57:30,0,66
chr10	20789923	.	ACACACACACT	A	5169.47	PASS	AB=0.942;AC=29;AF=0.518;AN=56;BaseQRankSum=2.139;DP=604;FS=4.691;HRun=0;HaplotypeScore=145.8310;InbreedingCoeff=0.2621;MQ=60.93;MQ0=16;MQRankSum=-4.058;QD=14.36;ReadPosRankSum=-0.799;VQSLOD=3.7506;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:29,6:35:33.95:601,0,34	0/1:4,0:4:18.94:19,0,68	0/0:37,0:19:37.17:0,37,520	0/0:45,0:23:48.67:0,49,572	0/1:14,0:14:51.96:106,0,52	1/1:1,15:16:9.03:239,9,0	1/1:22,0:20:44.60:475,45,0	1/1:20,0:20:37.03:520,37,0	1/1:1,18:20:18.04:565,18,0	0/1:19,0:19:27.23:27,0,839	0/1:4,0:4:39.90:40,0,60	0/1:21,0:21:40.63:41,0,56	1/1:19,4:23:48.07:901,48,0	0/0:16,0:16:1.41:0,1,2	0/1:20,1:21:2.46:268,0,2	0/0:25,0:25:72.04:0,72,1901	0/0:45,0:45:99:0,122,3111	0/0:21,0:20:48.79:0,49,1281	0/1:17,0:17:99:219,0,335	1/1:4,9:12:10.59:217,11,0	1/1:10,39:49:3:93,3,0	0/0:13,0:13:3.93:0,4,27	0/0:16,0:14:2.79:0,3,24	0/0:26,0:26:5.86:0,6,26	1/1:3,15:18:9.03:274,9,0	0/1:7,7:13:3.02:233,0,3	1/1:4,17:19:8.63:215,9,0	1/1:9,0:9:14.95:117,15,0
chr10	20789925	.	ACACACACT	A	4397.24	PASS	AB=0.995;AC=35;AF=0.625;AN=56;BaseQRankSum=3.786;DP=587;FS=4.637;HRun=0;HaplotypeScore=130.6424;InbreedingCoeff=0.1575;MQ=63.10;MQ0=16;MQRankSum=-2.092;QD=10.70;ReadPosRankSum=0.545;VQSLOD=3.6624;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:34,0:34:20.05:391,0,20	0/1:4,0:4:18.94:19,0,41	0/0:37,0:20:36.34:0,36,490	0/0:44,0:22:48.67:0,49,526	0/1:14,0:14:27.34:105,0,27	1/1:16,0:16:8.62:140,9,0	1/1:23,0:21:37.73:356,38,0	1/1:20,0:20:36.47:455,36,0	1/1:20,0:20:19.85:392,20,0	0/1:16,0:16:58.84:59,0,590	0/1:4,0:4:39.67:40,0,40	0/1:18,1:19:22.77:131,0,23	1/1:24,0:24:50.15:645,50,0	1/1:16,0:16:5.77:50,6,0	1/1:3,18:21:18.06:480,18,0	0/0:25,0:25:68.99:0,69,1513	0/0:48,0:48:99:0,124,2552	0/0:22,0:21:51.14:0,51,1064	0/1:18,0:18:99:262,0,249	1/1:12,0:11:10.56:120,11,0	1/1:44,0:44:3.01:60,3,0	0/1:12,0:12:15.92:42,0,16	0/1:14,0:12:0.07:0,0,0	0/1:26,0:26:15.17:35,0,15	1/1:17,0:17:9.03:194,9,0	0/1:12,0:11:3.24:187,0,3	1/1:18,0:17:8.24:148,8,0	1/1:7,0:7:3.84:84,4,0
chr10	20789927	.	ACACACT	A	4315.84	PASS	AB=0.927;AC=40;AF=0.714;AN=56;BaseQRankSum=3.256;DP=586;FS=10.256;HRun=0;HaplotypeScore=118.5086;InbreedingCoeff=0.4176;MQ=68.03;MQ0=15;MQRankSum=-3.223;QD=10.68;ReadPosRankSum=0.315;VQSLOD=3.3276;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:31,0:31:12.53:323,0,13	1/1:4,0:4:0.52:21,1,0	0/0:41,0:24:45.27:0,45,526	0/0:46,0:24:54.60:0,55,529	0/1:15,0:15:3.84:127,0,4	1/1:17,0:17:5.92:102,6,0	1/1:24,0:22:38.17:371,38,0	1/1:19,0:19:52.53:453,53,0	1/1:20,0:20:20.61:313,21,0	0/1:17,0:17:93.94:94,0,307	0/1:4,0:4:13.95:40,0,14	1/1:4,16:20:14.36:216,14,0	1/1:21,0:21:48.39:541,48,0	1/1:1,14:15:5.85:140,6,0	1/1:20,0:20:18.06:302,18,0	0/0:26,0:26:62.64:0,63,1130	0/0:48,0:48:99:0,124,1975	0/0:21,0:21:16.10:0,16,794	0/1:19,0:19:99:292,0,142	1/1:12,0:11:9.81:90,10,0	1/1:41,0:41:3.01:46,3,0	1/1:2,10:12:6.02:140,6,0	0/1:3,11:12:0.10:0,0,0	1/1:3,23:26:5.81:133,6,0	1/1:17,0:17:9.03:152,9,0	1/1:12,0:11:18.86:180,19,0	1/1:18,0:17:8.17:120,8,0	1/1:6,0:6:14.96:119,15,0
chr10	20790237	.	CTG	C	1100.84	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-0.624;DP=711;FS=0.686;HRun=0;HaplotypeScore=119.4914;InbreedingCoeff=0.9913;MQ=78.09;MQ0=1;MQRankSum=-0.580;QD=30.58;ReadPosRankSum=1.998;VQSLOD=5.1666;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,157,2749	0/0:15,0:15:45.15:0,45,785	0/0:19,0:19:44.94:0,45,657	0/0:26,0:26:41.77:0,42,758	0/0:20,0:20:45.15:0,45,797	0/0:19,0:19:48.16:0,48,832	0/0:29,0:29:78.27:0,78,1371	0/0:25,0:25:69.24:0,69,1222	0/0:22,0:22:57.20:0,57,999	0/0:41,0:41:99:0,111,1888	0/0:7,0:7:18.06:0,18,319	0/0:33,0:33:93.32:0,93,1650	0/0:22,0:22:57.20:0,57,1000	0/0:35,0:35:99:0,99,1749	1/1:2,34:36:87.29:1196,87,0	0/0:30,0:30:90.29:0,90,1552	0/0:27,0:27:72.22:0,72,1246	0/0:30,0:30:81.28:0,81,1437	0/0:22,0:22:60.16:0,60,1024	0/0:16,0:16:39.13:0,39,691	0/0:29,0:28:75.26:0,75,1325	0/0:13,0:13:39.09:0,39,635	0/0:11,0:11:30.10:0,30,532	0/0:31,0:31:93.32:0,93,1644	0/0:16,0:16:45.15:0,45,794	0/0:33,0:33:96.32:0,96,1676	0/0:37,0:36:99:0,108,1905	0/0:15,0:15:42.14:0,42,745
chr10	20790453	.	T	TCAG	2803.73	PASS	AB=0.952;AC=11;AF=0.196;AN=56;BaseQRankSum=5.021;DP=697;FS=4.234;HRun=0;HaplotypeScore=139.7107;InbreedingCoeff=0.8802;MQ=81.65;MQ0=0;MQRankSum=-3.633;QD=23.17;ReadPosRankSum=-2.846;VQSLOD=3.1873;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:75.24:0,75,1101	1/1:3,5:8:15.05:313,15,0	0/0:20,0:20:45.11:0,45,627	0/0:18,0:18:33.07:0,33,451	1/1:11,14:25:27.45:566,27,0	0/0:14,0:14:36.12:0,36,538	0/0:28,0:28:72.23:0,72,1054	0/0:34,0:34:90.29:0,90,1310	0/0:26,0:26:69.23:0,69,1032	1/1:9,21:33:69.19:1278,69,0	1/1:7,10:17:9.11:245,9,0	0/0:27,0:27:72.24:0,72,1075	0/0:25,0:25:69.23:0,69,1021	0/0:41,0:41:96.30:0,96,1413	0/0:34,0:34:78.19:0,78,1117	0/0:28,0:27:75.25:0,75,1121	0/0:40,0:40:99:0,111,1639	0/0:15,0:15:36.12:0,36,538	1/1:10,8:18:30.10:566,30,0	0/0:15,0:15:39.12:0,39,563	0/0:68,0:68:99:0,165,2383	0/0:14,0:14:29.94:0,30,448	0/0:11,0:11:24.08:0,24,359	0/0:38,0:38:87.28:0,87,1282	0/0:10,0:10:24.07:0,24,340	0/1:19,1:20:8.70:9,0,708	0/0:29,0:29:63.14:0,63,872	0/0:9,0:9:21.07:0,21,314
chr10	20790896	.	GGA	G	10493.44	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=2.327;DP=832;FS=1.119;HRun=0;HaplotypeScore=125.4181;InbreedingCoeff=0.9716;MQ=61.45;MQ0=21;MQRankSum=0.908;QD=19.58;ReadPosRankSum=5.094;VQSLOD=4.7256;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,43:55:99:1238,105,0	0/0:3,0:9:11.98:0,12,121	0/0:43,1:30:42.08:0,42,587	0/0:50,0:27:41.69:0,42,551	0/0:5,0:21:23.90:0,24,215	1/1:4,20:23:38.95:454,39,0	1/1:12,22:34:48.15:584,48,0	1/1:7,17:23:42.12:498,42,0	1/1:6,29:34:75.24:916,75,0	0/0:7,0:31:69.02:0,69,592	0/0:2,0:12:14.99:0,15,130	1/1:6,22:26:41.84:611,42,0	1/1:5,24:29:63.20:766,63,0	1/1:7,19:23:45.14:550,45,0	1/1:34,9:42:52.28:387,52,0	0/0:38,2:40:50.63:0,51,1325	0/0:37,1:38:62.61:0,63,1439	0/0:22,0:22:57.14:0,57,865	0/0:12,0:25:40.59:0,41,371	1/1:5,10:14:21.07:257,21,0	1/1:10,29:39:4.93:706,5,0	1/1:10,18:28:36.11:440,36,0	1/1:6,14:20:30.09:367,30,0	1/1:9,39:48:87.27:1063,87,0	1/1:3,11:14:27.08:330,27,0	1/1:8,19:28:18.84:558,19,0	1/1:5,16:19:24.05:293,24,0	1/1:11,13:24:39.12:476,39,0
chr10	20790912	.	A	ACAGACG	3451.19	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=-2.073;DP=802;FS=6.077;HRun=0;HaplotypeScore=197.7981;InbreedingCoeff=-0.3491;MQ=57.26;MQ0=29;MQRankSum=1.765;QD=6.86;ReadPosRankSum=-3.431;VQSLOD=1.3449;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:56,0:56:99:322,0,707	0/0:9,0:9:15.04:0,15,261	0/0:41,0:21:44.39:0,44,875	0/0:61,0:26:57.24:0,57,905	0/0:23,0:21:30.08:0,30,450	0/1:27,0:25:43.42:43,0,587	0/1:28,0:28:99:199,0,404	0/1:28,0:27:99:176,0,565	0/1:32,0:31:99:135,0,690	0/0:33,0:33:84.26:0,84,1136	0/0:14,0:13:21.04:0,21,287	0/1:28,0:26:80.28:80,0,582	0/1:31,0:31:91.89:92,0,769	0/1:26,0:23:99:135,0,492	1/1:15,29:44:67.93:1866,68,0	0/0:35,0:35:99:0,102,2357	0/0:37,0:37:99:0,111,2389	0/0:20,0:20:60.12:0,60,1300	0/0:26,0:23:51.79:0,52,611	0/1:11,0:10:24.49:24,0,247	0/1:39,0:39:45.65:46,0,781	0/1:22,0:22:12.68:13,0,532	0/1:19,0:19:55.10:55,0,445	0/1:42,0:42:93.16:93,0,869	0/1:11,0:11:20.55:21,0,269	0/1:24,0:24:50.91:51,0,586	0/1:18,0:16:10.10:10,0,230	0/1:16,0:16:89.59:90,0,405
chr10	20790998	.	T	TAAA	10428.56	PASS	AB=0.704;AC=18;AF=0.321;AN=56;BaseQRankSum=11.337;DP=778;FS=6.533;HRun=0;HaplotypeScore=188.1916;InbreedingCoeff=-0.1684;MQ=71.78;MQ0=5;MQRankSum=-4.786;QD=23.92;ReadPosRankSum=0.137;VQSLOD=4.2964;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:24,22:46:99:1201,0,176	0/0:11,0:11:27.09:0,27,491	0/0:41,0:34:90.89:0,91,1525	0/0:28,0:24:69.47:0,69,1056	0/0:23,0:23:53.86:0,54,817	0/1:12,10:21:99:447,0,112	0/1:20,7:27:99:470,0,116	0/0:36,0:36:48.17:0,48,568	0/1:14,8:22:99:412,0,132	0/0:42,0:42:99:0,126,2312	0/0:17,0:17:44.90:0,45,687	1/1:8,14:22:10.68:823,11,0	0/1:21,13:34:99:711,0,138	0/1:11,18:29:17.27:843,0,17	0/0:37,0:37:93.11:0,93,1587	0/0:24,0:24:72.19:0,72,1216	0/0:28,0:28:84.14:0,84,1425	0/0:22,0:22:55.53:0,56,1084	0/0:33,0:31:87.29:0,87,1567	0/1:9,11:20:51.25:545,0,51	0/1:32,17:48:99:923,0,293	0/1:11,7:18:84.22:415,0,84	0/1:11,7:18:71.42:250,0,71	0/1:16,19:35:55.62:1061,0,56	0/1:10,7:17:99:343,0,117	0/1:24,12:37:99:750,0,198	0/1:13,10:23:99:558,0,105	1/1:4,13:17:8.28:675,8,0
chr10	20791000	.	A	AC	4341.88	PASS	AB=0.677;AC=16;AF=0.286;AN=56;BaseQRankSum=14.264;DP=796;FS=5.699;HRun=0;HaplotypeScore=185.1677;InbreedingCoeff=-0.4000;MQ=70.03;MQ0=6;MQRankSum=-2.090;QD=9.65;ReadPosRankSum=5.759;VQSLOD=4.6509;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:19,27:46:99:464,0,479	0/0:11,0:11:27.09:0,27,356	0/0:39,0:32:87.18:0,87,1167	0/0:30,0:26:66.63:0,67,856	0/0:23,0:23:42.57:0,43,545	0/1:11,10:20:99:153,0,316	0/1:19,11:30:99:218,0,447	0/0:42,0:38:78.41:0,78,1288	0/1:15,8:23:99:173,0,324	0/0:42,0:42:99:0,126,1694	0/0:18,0:18:42.04:0,42,508	0/1:8,16:24:47.29:399,0,47	0/1:21,14:35:99:282,0,531	0/1:12,18:30:99:432,0,171	0/0:36,0:36:99:0,99,1299	0/0:23,0:23:69.22:0,69,948	0/0:27,0:26:77.27:0,77,1072	0/0:22,0:22:24.26:0,24,784	0/0:33,0:31:87.76:0,88,1184	0/1:10,11:21:99:266,0,208	0/1:31,18:48:99:318,0,841	0/1:11,7:18:99:176,0,229	0/1:11,7:19:93:93,0,167	0/1:15,20:35:99:439,0,290	0/1:11,8:19:99:158,0,294	0/1:23,15:38:99:295,0,518	0/1:15,10:25:99:195,0,317	0/1:2,15:17:27.73:280,0,28
chr10	20791024	.	CAGACA	C	5137.96	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-0.808;DP=812;FS=4.442;HRun=0;HaplotypeScore=241.3791;InbreedingCoeff=0.9968;MQ=63.02;MQ0=8;MQRankSum=0.306;QD=43.18;ReadPosRankSum=0.409;VQSLOD=4.7030;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,129,2875	1/1:0,10:10:21.07:489,21,0	0/0:41,0:32:78.82:0,79,1423	0/0:26,0:23:56.40:0,56,1130	1/1:0,25:25:30.10:633,30,0	0/0:18,0:17:48.16:0,48,1150	0/0:35,0:35:84.27:0,84,1894	0/0:50,0:46:99:0,132,2628	0/0:28,0:28:78.27:0,78,1572	1/1:0,36:36:99:2142,108,0	1/1:0,18:18:18.06:419,18,0	0/0:32,0:32:96.33:0,96,2375	0/0:25,0:25:75.26:0,75,1840	0/0:32,0:32:84.29:0,84,2021	0/0:38,0:38:99:0,102,2832	0/0:28,0:28:84.29:0,84,2219	0/0:29,0:28:84.29:0,84,2490	0/0:25,0:25:75.26:0,75,1951	1/1:1,29:29:81.27:1456,81,0	0/0:19,0:19:54.19:0,54,1344	0/0:47,0:47:99:0,123,2917	0/0:19,0:19:50.20:0,50,1117	0/0:19,0:19:26.42:0,26,543	0/0:32,0:32:96.29:0,96,2362	0/0:15,0:15:45.15:0,45,1148	0/0:38,0:38:99:0,114,2736	0/0:29,0:29:84.27:0,84,1919	0/0:19,0:19:57.20:0,57,1411
chr10	20792482	.	AAG	A	14510.94	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-0.927;DP=698;FS=0.637;HRun=0;HaplotypeScore=96.0913;InbreedingCoeff=0.9990;MQ=78.31;MQ0=5;MQRankSum=-2.196;QD=32.39;ReadPosRankSum=2.102;VQSLOD=7.1049;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,41:41:99:1288,99,0	0/0:9,0:9:21.05:0,21,217	0/0:13,0:12:27.09:0,27,422	0/0:23,0:23:50.08:0,50,806	0/0:31,0:31:87.18:0,87,924	1/1:4,22:26:54.18:702,54,0	1/1:2,21:23:57.19:742,57,0	1/1:1,28:29:84.25:1062,84,0	1/1:4,31:35:81.26:1053,81,0	0/0:30,0:30:75.15:0,75,755	0/0:20,0:20:48.12:0,48,527	1/1:1,27:27:63.20:820,63,0	1/1:1,18:19:54.18:702,54,0	1/1:3,14:17:39.13:507,39,0	0/0:27,0:27:75.26:0,75,1276	0/0:23,1:24:27.19:0,27,1032	0/0:30,0:30:87.30:0,87,1476	0/0:31,0:30:84.29:0,84,1406	0/0:12,0:12:30.07:0,30,316	1/1:0,26:26:75.24:975,75,0	1/1:4,20:24:51.17:663,51,0	1/1:0,23:23:60.15:761,60,0	1/1:1,30:31:84.27:1093,84,0	1/1:3,22:25:66.21:859,66,0	1/1:1,19:20:57.19:742,57,0	1/1:6,31:36:60.33:1099,60,0	1/1:1,29:30:78.25:1015,78,0	1/1:1,11:12:33.11:429,33,0
chr10	20793056	.	GTCTGTCTGTCTCTC	G	13477.79	PASS	AB=0.529;AC=41;AF=0.759;AN=54;BaseQRankSum=8.668;DP=474;FS=4.435;HRun=0;HaplotypeScore=200.6183;InbreedingCoeff=0.7651;MQ=61.39;MQ0=8;MQRankSum=-8.334;QD=42.79;ReadPosRankSum=2.059;VQSLOD=3.8728;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,31:35:39.13:1569,39,0	1/1:5,0:6:18.05:579,18,0	0/0:20,0:12:27.06:0,27,582	0/0:41,0:35:65.77:0,66,2404	1/1:8,0:10:0.09:20,0,0	1/1:1,11:12:11.81:505,12,0	1/1:3,13:17:12.04:498,12,0	1/1:14,0:31:80.89:1270,81,0	1/1:2,11:15:12.04:475,12,0	1/1:8,0:14:29.15:1064,29,0	1/1:6,0:8:12:189,12,0	1/1:3,9:12:15.05:614,15,0	1/1:0,10:12:21.07:801,21,0	1/1:0,12:13:12.04:505,12,0	0/0:28,0:28:64.16:0,64,1327	0/0:16,0:16:42.14:0,42,2428	0/0:18,0:18:48.12:0,48,2824	0/0:16,0:16:45.15:0,45,2061	1/1:19,0:18:47.58:1246,48,0	1/1:0,14:16:9.03:306,9,0	./.	1/1:0,8:9:15.05:484,15,0	1/1:0,13:14:15.05:578,15,0	1/1:3,21:23:3.01:126,3,0	1/1:0,10:10:15.52:560,16,0	1/1:2,15:17:39:1155,39,0	0/1:1,7:9:42.24:553,0,42	1/1:0,6:6:9.03:379,9,0
chr10	20793058	.	CTGTCTG	C	5468.79	PASS	AB=0.862;AC=39;AF=0.722;AN=54;BaseQRankSum=9.856;DP=475;FS=2.909;HRun=0;HaplotypeScore=187.0238;InbreedingCoeff=0.6867;MQ=58.83;MQ0=8;MQRankSum=-7.993;QD=17.09;ReadPosRankSum=3.231;VQSLOD=4.4466;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:35,0:35:39.05:585,39,0	1/1:2,4:6:18.05:300,18,0	0/0:19,0:11:27.06:0,27,433	0/0:39,0:33:36.85:0,37,1290	0/1:9,3:12:5.88:19,0,6	1/1:12,0:12:12.03:189,12,0	1/1:19,0:17:12.04:192,12,0	1/1:31,0:30:9.66:541,10,0	1/1:14,0:14:11.77:190,12,0	1/1:9,7:16:7.93:512,8,0	0/1:8,3:11:0.23:113,0,0	1/1:13,0:12:15.05:227,15,0	1/1:12,0:12:21.07:309,21,0	1/1:13,0:13:12.04:189,12,0	0/0:28,0:28:41.84:0,42,331	0/0:16,0:16:42.14:0,42,1285	0/0:17,0:17:48.12:0,48,1506	0/0:16,0:16:45.12:0,45,1069	1/1:13,8:19:12.68:611,13,0	1/1:16,0:16:8.94:112,9,0	./.	1/1:9,0:9:14.91:183,15,0	1/1:14,0:14:15:208,15,0	1/1:24,0:23:3.01:47,3,0	1/1:10,0:10:14.97:207,15,0	1/1:17,0:16:28.62:386,29,0	0/1:9,0:9:10.83:206,0,11	1/1:6,0:6:9.03:142,9,0
chr10	20793064	.	GTC	G	2229.12	PASS	AC=44;AF=0.815;AN=54;BaseQRankSum=9.365;DP=474;FS=0.668;HRun=0;HaplotypeScore=181.1846;InbreedingCoeff=0.7450;MQ=56.21;MQ0=11;MQRankSum=-8.606;QD=6.30;ReadPosRankSum=2.099;VQSLOD=3.1328;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:35,0:35:37.30:219,37,0	1/1:6,0:6:14.20:69,14,0	1/1:16,0:5:0.47:1,0,0	0/0:41,0:30:14.98:0,15,133	0/0:11,0:11:0.47:0,0,1	1/1:12,0:12:11.36:56,11,0	1/1:19,0:17:11.52:68,12,0	1/1:19,9:27:28.50:328,28,0	1/1:14,0:14:11.40:70,11,0	1/1:18,0:18:23.83:132,24,0	1/1:11,0:11:1.31:12,1,0	1/1:13,0:12:14.37:91,14,0	1/1:12,0:12:14.20:70,14,0	1/1:13,1:14:11.32:71,11,0	1/1:28,0:29:42.35:317,42,0	0/0:16,0:16:39.11:0,39,574	0/0:16,0:16:26.10:0,26,506	0/0:15,0:15:24.01:0,24,295	1/1:21,0:19:37.01:168,37,0	1/1:16,0:16:8.69:64,9,0	./.	1/1:9,0:9:14.50:112,14,0	1/1:14,0:14:14.37:92,14,0	1/1:24,0:23:2.84:14,3,0	1/1:10,0:10:14.37:92,14,0	1/1:16,0:15:31.93:218,32,0	1/1:10,1:10:6.65:81,7,0	1/1:6,0:6:8.52:42,9,0
chr10	20793071	.	TCTCTCTCTCTCTCA	T	7839.30	PASS	AB=0.973;AC=33;AF=0.589;AN=56;BaseQRankSum=11.097;DP=507;FS=3.665;HRun=0;HaplotypeScore=236.8727;InbreedingCoeff=0.2149;MQ=54.66;MQ0=13;MQRankSum=-8.796;QD=22.72;ReadPosRankSum=6.743;VQSLOD=3.4394;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:37,0:37:85.45:820,0,85	1/1:3,4:7:18.46:572,18,0	0/0:13,0:3:5.65:0,6,151	0/0:50,0:25:44.24:0,44,1516	1/1:9,2:11:3.16:24,3,0	1/1:11,0:11:12.04:291,12,0	0/1:21,0:19:99:266,0,138	0/1:36,0:35:86.92:87,0,468	0/1:15,0:15:56.02:262,0,56	1/1:12,7:19:40.21:1088,40,0	1/1:9,3:12:6.52:134,7,0	1/1:13,0:12:15.05:350,15,0	1/1:13,0:13:21.06:456,21,0	1/1:14,0:14:12.51:294,13,0	0/0:27,0:27:54.97:0,55,657	0/0:18,0:18:51.14:0,51,2717	0/0:18,0:18:51.18:0,51,2843	0/0:13,0:13:36.12:0,36,1723	0/1:17,7:23:7.18:1245,0,7	1/1:16,0:16:6.49:152,6,0	0/0:23,0:22:2.87:0,3,72	1/1:10,0:10:9.47:223,9,0	1/1:14,0:14:15.02:317,15,0	1/1:24,0:23:2.85:76,3,0	0/1:11,0:11:56.35:276,0,56	0/1:16,0:15:99:431,0,117	0/1:12,0:11:99:279,0,150	0/1:8,0:7:58.95:195,0,59
chr10	20793073	.	TCTCTCTCTCTCA	T	6587.16	PASS	AB=1.000;AC=28;AF=0.500;AN=56;BaseQRankSum=12.089;DP=525;FS=0.982;HRun=0;HaplotypeScore=234.2608;InbreedingCoeff=-0.0708;MQ=54.15;MQ0=13;MQRankSum=-8.891;QD=18.30;ReadPosRankSum=7.377;VQSLOD=3.1518;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:38,0:38:71.12:521,0,71	1/1:7,0:7:17.99:548,18,0	0/0:13,0:3:5.66:0,6,99	0/0:48,0:22:32.04:0,32,1111	1/1:12,0:12:3.44:69,3,0	0/1:12,0:12:19.59:176,0,20	0/1:24,0:22:99:169,0,240	0/1:38,0:37:13.83:14,0,618	0/1:15,0:15:34.90:199,0,35	1/1:19,0:19:41.11:1219,41,0	1/1:12,0:12:6.68:174,7,0	0/1:14,0:13:30.59:227,0,31	0/1:14,0:14:23.76:283,0,24	1/1:14,0:14:12.51:196,13,0	0/0:26,0:26:41.35:0,41,171	0/0:18,0:18:48.16:0,48,2376	0/0:18,0:18:51.18:0,51,2465	0/0:15,0:15:40.38:0,40,1472	1/1:20,5:23:19.15:1550,19,0	0/1:17,0:17:3.27:94,0,3	0/0:26,0:25:2.71:0,3,69	0/1:10,0:10:9.22:139,0,9	0/1:15,0:15:34.47:180,0,34	1/1:25,0:24:2.85:50,3,0	0/1:11,0:11:43.88:174,0,44	0/1:17,0:15:99:296,0,113	0/1:13,0:12:99:184,0,161	0/1:8,0:7:55.35:124,0,55
chr10	20793079	.	TCTCTCACA	T	3936.96	PASS	AB=1.000;AC=27;AF=0.482;AN=56;BaseQRankSum=11.927;DP=537;FS=2.776;HRun=0;HaplotypeScore=222.3400;InbreedingCoeff=-0.0781;MQ=48.04;MQ0=15;MQRankSum=-10.675;QD=11.12;ReadPosRankSum=8.324;VQSLOD=1.5535;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:39,0:39:99:153,0,109	1/1:7,0:7:14.99:276,15,0	0/0:23,0:6:8.86:0,9,143	0/0:48,0:12:23.78:0,24,367	1/1:13,0:13:3.01:36,3,0	0/1:11,0:11:3.28:53,0,3	0/1:24,0:22:43.02:43,0,296	0/0:36,0:34:30.98:0,31,739	0/1:15,0:15:35.17:72,0,35	1/1:21,0:21:44.15:581,44,0	1/1:12,0:12:6:88,6,0	0/1:12,0:11:64.82:65,0,78	0/1:15,0:15:61.49:61,0,144	0/1:14,0:14:32.19:56,0,32	1/1:2,23:25:47.63:1339,48,0	0/0:17,0:17:48.16:0,48,1708	0/0:18,0:18:51.17:0,51,1619	0/0:13,0:13:32.53:0,33,817	1/1:23,0:23:40.52:769,41,0	0/1:17,0:17:3.55:34,0,4	0/0:28,0:26:6.24:0,6,119	0/1:12,0:12:54.22:66,0,54	0/1:16,0:16:54.28:54,0,138	0/1:27,0:26:6.94:7,0,134	0/1:12,0:12:47.50:48,0,91	0/1:18,0:16:61.03:61,0,207	0/1:13,0:12:44.73:45,0,144	0/1:8,0:7:31.11:31,0,56
chr10	20793122	.	TCACA	T	1322.25	PASS	AB=0.761;AC=10;AF=0.179;AN=56;BaseQRankSum=6.948;DP=660;FS=2.226;HRun=0;HaplotypeScore=206.3757;InbreedingCoeff=0.7324;MQ=45.56;MQ0=29;MQRankSum=-8.494;QD=13.49;ReadPosRankSum=-1.549;VQSLOD=3.0567;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:27:32.50:0,32,525	1/1:4,6:10:17.91:182,18,0	0/0:70,0:11:8.88:0,9,68	0/0:92,0:17:9.35:0,9,148	0/1:3,8:12:0.08:1,0,0	0/0:10,0:9:6:0,6,84	0/0:25,0:25:41.77:0,42,848	0/0:35,0:33:46.56:0,47,632	0/0:22,0:22:20.65:0,21,309	1/1:6,13:22:45.15:711,45,0	1/1:3,10:13:5.95:52,6,0	0/0:14,0:14:10.05:0,10,251	0/0:17,0:17:16.15:0,16,433	0/1:18,0:19:0.79:1,0,134	0/0:21,0:21:8.82:0,9,143	0/0:20,0:20:45.12:0,45,966	0/0:19,0:19:41.57:0,42,732	0/0:13,0:11:29.45:0,29,602	1/1:11,8:21:36.03:525,36,0	0/0:18,0:18:26.61:0,27,413	0/0:30,0:28:25.75:0,26,431	0/0:17,0:17:14.59:0,15,291	0/0:16,0:16:21.96:0,22,412	0/0:27,0:27:33.33:0,33,627	0/0:14,0:14:13.19:0,13,233	0/0:22,0:21:1.84:0,2,690	0/0:15,0:15:19.91:0,20,438	0/0:12,0:12:21.04:0,21,378
chr10	20793147	.	CCTCTCTCTCTCT	C	593.68	PASS	AB=0.989;AC=16;AF=0.471;AN=34;BaseQRankSum=3.373;DP=579;FS=4.675;HRun=0;HaplotypeScore=190.3457;InbreedingCoeff=0.2685;MQ=42.76;MQ0=61;MQRankSum=-2.335;QD=3.60;ReadPosRankSum=-0.830;VQSLOD=2.5393;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/0:8,0:8:0:0,0,0	./.	0/0:62,0:11:0:0,0,0	./.	1/1:14,0:12:2.63:76,3,0	./.	0/0:32,0:25:0:0,0,0	0/1:18,0:18:13.94:14,0,131	./.	./.	./.	1/1:16,0:15:2.97:101,3,0	1/1:18,1:19:5.59:172,6,0	0/0:14,1:15:0.06:0,0,1	0/0:16,0:16:9.02:0,9,370	0/0:21,0:19:16.41:0,16,751	0/0:17,0:14:9.03:0,9,478	0/1:18,0:17:11.95:12,0,42	1/1:15,0:15:0.89:2,1,0	./.	./.	0/1:14,0:13:0:0,0,0	./.	./.	0/1:21,0:21:0.95:79,0,1	1/1:14,0:13:3.01:101,3,0	1/1:14,0:13:6.02:141,6,0
chr10	20793282	.	CTGGGG	C	16566.14	PASS	AB=0.515;AC=33;AF=0.589;AN=56;BaseQRankSum=11.013;DP=515;FS=1.130;HRun=0;HaplotypeScore=106.4263;InbreedingCoeff=0.9251;MQ=76.55;MQ0=0;MQRankSum=-7.057;QD=52.76;ReadPosRankSum=3.716;VQSLOD=5.4322;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,21:21:39.13:905,39,0	0/0:10,0:10:27.09:0,27,898	0/0:14,0:14:42.13:0,42,1119	0/0:14,0:14:42.09:0,42,1113	0/0:21,0:21:54.06:0,54,1545	1/1:0,11:11:24.08:547,24,0	1/1:0,21:21:33.11:760,33,0	1/1:0,15:14:41.99:666,42,0	1/1:0,22:22:66.23:1508,66,0	0/0:21,0:21:57.15:0,57,1574	0/0:13,0:13:39.11:0,39,1131	1/1:0,13:13:39.13:897,39,0	1/1:0,11:10:27.09:627,27,0	1/1:0,21:21:51.18:1175,51,0	0/0:30,0:30:90.24:0,90,2901	0/0:16,0:16:48.15:0,48,1463	0/0:29,0:29:84.18:0,84,2596	0/0:17,0:17:51.17:0,51,1597	0/0:16,0:16:45.08:0,45,1180	1/1:0,28:28:60.10:1292,60,0	1/1:0,24:24:47.50:1081,47,0	1/1:0,16:16:36.12:835,36,0	1/1:1,18:20:51.65:1155,52,0	1/1:0,25:25:56.75:1323,57,0	1/1:3,7:10:23.90:457,24,0	0/1:1,16:17:47.96:965,0,48	1/1:0,13:13:26.96:628,27,0	1/1:0,26:26:75.26:1745,75,0
chr10	20794004	.	CA	C	1622.31	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=4.132;DP=523;FS=12.266;HRun=3;HaplotypeScore=325.8609;InbreedingCoeff=0.9761;MQ=59.40;MQ0=0;MQRankSum=-2.302;QD=20.80;ReadPosRankSum=1.003;VQSLOD=-0.1792;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:33.15:0,33,345	1/1:0,5:5:15.05:185,15,0	0/0:13,0:13:33.11:0,33,448	0/0:7,0:7:8.44:0,8,222	1/1:3,16:19:27:299,27,0	0/0:19,0:19:50.39:0,50,392	0/0:19,0:19:49.86:0,50,347	0/0:29,0:29:83.94:0,84,846	0/0:12,0:12:35.24:0,35,210	1/1:4,22:26:63.20:779,63,0	1/1:1,18:19:32.97:346,33,0	0/0:28,0:28:76.24:0,76,541	0/0:19,0:19:55.46:0,55,384	0/0:23,0:23:58.53:0,59,380	0/0:12,0:12:29.13:0,29,185	0/0:19,0:19:50.15:0,50,376	0/0:19,0:19:35.15:0,35,227	0/0:14,0:14:35.78:0,36,295	1/1:2,7:9:15.05:186,15,0	0/0:28,0:28:67.65:0,68,468	0/0:14,0:14:30.75:0,31,250	0/0:24,0:24:55.78:0,56,397	0/0:20,0:20:40.64:0,41,269	0/0:19,0:19:23.40:0,23,177	0/0:32,0:32:76.13:0,76,586	0/0:19,0:19:33.62:0,34,391	0/0:17,0:16:44.26:0,44,364	0/0:15,0:15:38.60:0,39,263
chr10	20794133	.	G	GCTGGAT	5181.62	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=6.950;DP=577;FS=7.328;HRun=0;HaplotypeScore=131.6940;InbreedingCoeff=0.9878;MQ=93.81;MQ0=0;MQRankSum=-9.222;QD=68.18;ReadPosRankSum=0.829;VQSLOD=5.5175;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:81.28:0,81,1793	1/1:2,6:9:21.07:721,21,0	0/0:32,0:32:75.23:0,75,1573	0/0:27,0:27:63.15:0,63,1237	1/1:1,18:19:30.10:1026,30,0	0/0:23,0:23:63.22:0,63,1394	0/0:20,0:20:54.19:0,54,1209	0/0:30,0:30:78.24:0,78,1627	0/0:14,0:14:33.10:0,33,689	1/1:5,20:26:60.21:2037,60,0	1/1:0,4:4:12.04:411,12,0	0/0:33,0:33:99:0,99,2155	0/0:14,0:14:39.13:0,39,854	0/0:28,0:28:81.26:0,81,1775	0/0:16,0:16:48.15:0,48,1036	0/0:19,0:19:54.19:0,54,1211	0/0:26,0:26:66.23:0,66,1436	0/0:15,0:15:45.13:0,45,965	1/1:8,9:18:33.10:987,33,0	0/0:21,0:21:54.19:0,54,1160	0/0:22,0:22:66.21:0,66,1379	0/0:24,0:24:63.22:0,63,1359	0/0:13,0:13:33.11:0,33,741	0/0:24,0:24:57.20:0,57,1232	0/0:22,0:22:60.21:0,60,1301	0/0:18,0:18:48.11:0,48,990	0/0:24,0:23:72.11:0,72,1504	0/0:5,0:5:15.05:0,15,337
chr10	20794432	.	TTTA	T	5382.51	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=5.811;DP=517;FS=0.929;HRun=0;HaplotypeScore=94.4487;InbreedingCoeff=0.8863;MQ=69.44;MQ0=5;MQRankSum=-1.343;QD=16.31;ReadPosRankSum=-1.926;VQSLOD=4.0600;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,20:19:29.58:286,30,0	0/0:5,0:5:6.02:0,6,102	0/0:16,0:13:24.08:0,24,469	0/0:13,0:9:12.03:0,12,183	0/0:20,0:20:30.10:0,30,537	1/1:1,5:6:3.01:45,3,0	1/1:5,15:20:26.92:324,27,0	1/1:5,25:29:75.12:984,75,0	1/1:5,10:15:15.01:198,15,0	0/0:28,0:28:75.21:0,75,1393	0/0:22,0:22:36.12:0,36,683	1/1:7,14:21:18.06:267,18,0	1/1:2,9:11:6.02:89,6,0	1/1:3,17:20:24:308,24,0	1/1:14,4:18:29.67:248,30,0	0/0:18,0:18:39.07:0,39,675	0/0:23,0:22:48.12:0,48,820	0/0:22,0:21:60.19:0,60,1162	0/0:20,0:20:48.16:0,48,965	1/1:2,17:19:20.74:181,21,0	1/1:3,11:13:5.83:64,6,0	1/1:8,9:16:14.89:171,15,0	1/1:6,5:11:2.97:20,3,0	1/1:3,15:18:17.92:267,18,0	1/1:4,16:20:28.10:278,28,0	1/1:3,26:29:15.66:980,16,0	1/1:2,22:24:35.84:456,36,0	1/1:1,16:17:17.97:217,18,0
chr10	20794450	.	ATGTG	A	1008.12	PASS	AB=0.915;AC=13;AF=0.241;AN=54;BaseQRankSum=-2.634;DP=545;FS=1.580;HRun=0;HaplotypeScore=124.8304;InbreedingCoeff=0.2188;MQ=55.77;MQ0=21;MQRankSum=-0.231;QD=5.48;ReadPosRankSum=2.803;VQSLOD=2.0242;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:32.20:0,32,632	0/0:4,0:4:3.01:0,3,67	./.	0/0:10,0:4:3.01:0,3,45	0/0:10,0:13:12.04:0,12,252	0/0:8,0:8:12.04:0,12,146	0/1:16,0:17:13.60:14,0,29	0/0:39,0:34:14.69:0,15,149	0/1:14,0:15:19.58:20,0,168	0/0:21,0:27:30.10:0,30,625	0/0:11,0:12:12.04:0,12,220	0/0:17,0:17:8.62:0,9,86	0/0:9,0:9:3.01:0,3,42	0/1:19,0:21:4.52:5,0,60	0/0:22,0:22:8.83:0,9,157	1/1:7,9:16:15.05:236,15,0	1/1:9,10:18:20.36:310,20,0	1/1:7,13:20:21.22:460,21,0	0/0:20,0:21:13.29:0,13,236	0/0:16,0:17:5.67:0,6,204	0/1:18,0:17:19.59:20,0,79	0/0:16,0:16:24.55:0,25,317	0/1:10,1:9:35.31:35,0,78	0/0:21,0:21:30.10:0,30,395	0/1:21,2:24:66.50:66,0,257	0/0:38,0:38:38.35:0,38,443	0/0:29,1:31:7:0,7,449	0/1:17,0:17:0.17:0,0,203
chr10	20794491	.	T	TAC	7095.21	PASS	AB=1.000;AC=35;AF=0.673;AN=52;BaseQRankSum=-0.484;DP=455;FS=3.510;HRun=0;HaplotypeScore=95.0479;InbreedingCoeff=0.8659;MQ=56.33;MQ0=18;MQRankSum=1.152;QD=23.81;ReadPosRankSum=1.528;VQSLOD=5.3412;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:26,4:29:52.41:797,52,0	./.	./.	0/0:20,0:7:6.81:0,7,48	0/0:16,0:16:30.09:0,30,389	1/1:12,0:12:29.67:351,30,0	1/1:19,1:18:38.65:501,39,0	1/1:23,0:22:39.40:632,39,0	1/1:20,0:20:45.80:514,46,0	0/0:9,0:8:17.83:0,18,171	0/1:5,0:4:6.93:7,0,34	1/1:10,0:10:14.29:133,14,0	1/1:10,0:9:26.73:335,27,0	1/1:8,0:8:6.39:129,6,0	0/0:18,0:17:31.32:0,31,357	0/0:15,0:15:33.03:0,33,379	0/0:19,0:18:35.29:0,35,375	0/0:20,0:19:48:0,48,485	0/0:15,0:15:43.66:0,44,505	1/1:16,0:16:34.92:417,35,0	1/1:15,0:15:19.03:237,19,0	1/1:18,0:18:35.53:412,36,0	1/1:11,0:11:20.65:216,21,0	1/1:24,0:23:47.65:496,48,0	1/1:17,1:18:47.81:583,48,0	1/1:18,0:18:3.98:540,4,0	1/1:26,1:26:55.95:541,56,0	1/1:13,0:13:26.29:254,26,0
chr10	20797091	.	GGGA	G	943.33	PASS	AB=0.806;AC=30;AF=0.714;AN=42;BaseQRankSum=-1.252;DP=111;FS=6.990;HRun=0;HaplotypeScore=46.2220;InbreedingCoeff=0.2106;MQ=27.07;MQ0=10;MQRankSum=-1.003;QD=11.94;ReadPosRankSum=-0.471;VQSLOD=1.5489;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	0/0:4,0:3:2.76:0,3,19	1/1:3,1:3:3.01:41,3,0	0/0:2,2:2:2.88:0,3,15	1/1:6,9:14:27.56:363,28,0	1/1:1,2:3:8.96:79,9,0	0/0:6,0:5:8.63:0,9,105	./.	1/1:1,2:2:5.95:54,6,0	1/1:2,3:4:6.80:55,7,0	1/1:3,1:4:4.53:24,5,0	0/1:4,2:3:9.30:44,0,9	0/0:5,0:5:0.81:0,1,16	0/1:4,0:4:5.04:32,0,5	0/1:6,1:7:36.54:37,0,43	1/1:2,1:1:3.01:42,3,0	1/1:1,1:2:3.01:37,3,0	./.	1/1:1,3:4:5.04:32,5,0	0/1:1,2:2:0:0,0,0	1/1:1,3:4:2.84:14,3,0	1/1:0,3:3:5.75:53,6,0	1/1:3,4:7:12.02:125,12,0	1/1:1,1:2:3.01:34,3,0	./.
chr10	20797115	.	A	AGAG	1652.28	PASS	AB=1.000;AC=37;AF=0.740;AN=50;BaseQRankSum=3.681;DP=198;FS=22.379;HRun=0;HaplotypeScore=92.4928;InbreedingCoeff=0.1145;MQ=29.50;MQ0=9;MQRankSum=-2.154;QD=11.64;ReadPosRankSum=-2.303;VQSLOD=1.3433;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:4,0:4:0:0,0,0	1/1:1,1:2:3.01:64,3,0	./.	./.	1/1:6,3:8:9.03:163,9,0	1/1:5,0:4:4.73:52,5,0	0/1:6,0:4:8.64:29,0,9	0/0:21,0:20:2.81:0,3,6	1/1:4,0:4:7.87:80,8,0	1/1:6,6:11:30.10:543,30,0	1/1:4,1:5:3.01:64,3,0	1/1:9,0:7:13.47:97,13,0	1/1:15,0:14:20.16:105,20,0	1/1:6,0:6:11.69:69,12,0	0/1:7,0:5:18.29:61,0,18	0/0:12,0:12:20.22:0,20,295	0/1:7,0:7:21.88:22,0,122	0/0:9,0:9:5.22:0,5,262	./.	1/1:3,0:3:6.02:67,6,0	1/1:7,0:7:5.94:46,6,0	0/1:7,0:7:18.74:67,0,19	1/1:5,0:4:1.76:14,2,0	1/1:5,0:5:3.01:33,3,0	1/1:7,0:7:8.42:83,8,0	0/1:11,0:11:0.66:69,0,1	0/1:5,0:4:23.20:42,0,23	1/1:1,0:1:2.97:20,3,0
chr10	20797144	.	AG	A	1027.79	PASS	AB=0.923;AC=31;AF=0.554;AN=56;BaseQRankSum=2.005;DP=235;FS=15.692;HRun=2;HaplotypeScore=89.5548;InbreedingCoeff=0.3654;MQ=34.65;MQ0=0;MQRankSum=-2.123;QD=6.27;ReadPosRankSum=4.933;VQSLOD=-0.7015;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,0:8:5.29:12,5,0	1/1:0,2:2:6:54,6,0	0/0:8,0:7:19.60:0,20,194	0/0:5,0:3:8.92:0,9,105	1/1:4,2:6:6:52,6,0	0/0:7,0:7:5.86:0,6,54	0/0:8,0:6:1.48:0,1,40	0/1:12,0:12:1.35:1,0,57	0/1:8,0:8:1.53:6,0,2	1/1:1,8:9:11.92:205,12,0	1/1:5,1:6:3:27,3,0	0/1:7,1:7:1.66:12,0,2	1/1:14,0:13:12.62:31,13,0	1/1:8,0:8:6.65:17,7,0	0/1:10,0:9:15.36:15,0,49	1/1:3,12:15:25.29:315,25,0	1/1:3,6:9:10.85:152,11,0	0/1:3,9:12:9.09:242,0,9	1/1:1,0:1:3:28,3,0	1/1:5,0:5:4.71:14,5,0	1/1:8,0:8:2.49:7,2,0	0/0:8,0:8:0.63:0,1,63	0/0:13,0:12:7.66:0,8,79	0/0:9,0:9:8.56:0,9,43	0/1:10,0:10:1.62:2,0,18	0/1:13,0:13:2.48:2,0,39	0/0:8,0:7:6.04:0,6,89	0/0:5,0:5:5.84:0,6,52
chr10	20797743	.	T	TTTTGTTTG	28152.62	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-6.707;DP=651;FS=22.240;HRun=0;HaplotypeScore=140.2025;InbreedingCoeff=0.9928;MQ=60.08;MQ0=1;MQRankSum=-14.733;QD=62.15;ReadPosRankSum=-0.571;VQSLOD=3.0911;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,16:28:41.95:1310,42,0	0/0:10,0:10:27.08:0,27,649	0/0:24,0:23:35.61:0,36,806	0/0:17,0:16:28.86:0,29,684	0/0:22,0:22:48.16:0,48,1219	1/1:8,18:25:54.19:2189,54,0	1/1:15,13:29:36.12:1380,36,0	1/1:23,12:37:77.90:2146,78,0	1/1:4,11:15:24.08:930,24,0	0/0:28,0:28:60.20:0,60,1478	0/0:22,0:22:48.16:0,48,1222	1/1:6,14:20:36.12:1501,36,0	1/1:10,11:21:45.15:1727,45,0	1/1:10,22:33:54.18:2135,54,0	1/1:6,0:17:24.08:762,24,0	0/0:16,0:16:36.12:0,36,932	0/0:30,0:29:63.21:0,63,1556	0/0:11,0:11:27.09:0,27,640	0/0:18,0:18:33.11:0,33,806	1/1:6,20:27:42.14:1709,42,0	1/1:8,3:12:11.73:291,12,0	1/1:8,13:23:39.05:1271,39,0	1/1:11,20:32:63.22:2501,63,0	1/1:7,7:15:18.53:667,19,0	1/1:6,17:27:39.13:1566,39,0	1/1:11,27:40:90.06:3075,90,0	1/1:10,17:26:45.15:1745,45,0	1/1:10,14:24:30.10:1247,30,0
chr10	20798778	.	G	GT	18706.94	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-13.384;DP=698;FS=0.295;HRun=1;HaplotypeScore=62.5968;InbreedingCoeff=1.0000;MQ=97.87;MQ0=0;MQRankSum=-4.768;QD=41.20;ReadPosRankSum=2.339;VQSLOD=5.4333;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,28:29:87.29:1293,87,0	0/0:15,0:15:45.15:0,45,584	0/0:41,0:41:99:0,108,1332	0/0:29,0:29:76.68:0,77,1027	0/0:25,0:25:75.24:0,75,974	1/1:0,21:21:54.18:809,54,0	1/1:0,30:30:81.27:1214,81,0	1/1:3,40:43:99:1794,120,0	1/1:1,19:20:54.18:809,54,0	0/0:32,0:32:90.29:0,90,1168	0/0:14,0:14:42.14:0,42,545	1/1:1,22:23:57.19:854,57,0	1/1:0,14:14:39.13:584,39,0	1/1:0,19:19:57.19:854,57,0	1/1:0,21:21:60:899,60,0	0/0:20,0:20:57.19:0,57,740	0/0:19,0:19:51.17:0,51,662	0/0:23,0:23:57.19:0,57,740	0/0:26,0:26:75.24:0,75,974	1/1:0,27:27:81.23:1189,81,0	1/1:2,17:19:48.16:719,48,0	1/1:2,21:23:63.21:944,63,0	1/1:0,28:28:78.26:1169,78,0	1/1:0,19:19:51.17:765,51,0	1/1:0,15:15:39.13:585,39,0	1/1:1,32:33:96.33:1437,96,0	1/1:3,40:42:99:1663,111,0	1/1:1,26:27:75.25:1124,75,0
chr10	20799020	.	GAAACCA	G	21508.73	PASS	AB=0.509;AC=35;AF=0.625;AN=56;BaseQRankSum=14.038;DP=679;FS=11.320;HRun=0;HaplotypeScore=157.2675;InbreedingCoeff=0.9229;MQ=64.70;MQ0=0;MQRankSum=-18.002;QD=50.85;ReadPosRankSum=3.775;VQSLOD=4.4695;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,35:38:69.23:1580,69,0	0/0:9,0:9:27.09:0,27,932	0/0:41,0:37:99:0,102,2608	0/0:30,0:30:72.29:0,72,2487	0/0:21,0:21:60.21:0,60,1935	1/1:0,14:14:42.14:928,42,0	1/1:0,35:35:84.29:1976,84,0	1/1:0,26:26:78.23:1512,78,0	1/1:0,24:24:63.21:1473,63,0	0/0:22,0:22:63.22:0,63,2153	0/0:18,0:18:54.19:0,54,1778	1/1:0,19:19:54.18:1127,54,0	1/1:0,16:16:39.13:930,39,0	1/1:2,31:33:69.24:1652,69,0	1/1:0,36:36:90.31:2155,90,0	0/0:34,1:35:27.57:0,28,3240	0/0:33,0:32:96.27:0,96,3146	0/0:23,0:23:66.21:0,66,2226	0/0:24,0:24:72.24:0,72,2239	1/1:0,16:16:45.15:1077,45,0	1/1:1,24:25:29.21:527,29,0	1/1:0,13:13:36.12:712,36,0	1/1:0,17:17:36.12:789,36,0	1/1:1,30:31:35.73:781,36,0	1/1:1,21:22:60.18:1278,60,0	0/1:1,26:27:29.38:1572,0,29	1/1:1,16:17:42.14:970,42,0	1/1:0,14:14:21.07:467,21,0
chr10	20801433	.	C	CA	1992.48	PASS	AB=0.793;AC=33;AF=0.717;AN=46;BaseQRankSum=0.075;DP=435;FS=6.038;HRun=11;HaplotypeScore=50.7447;InbreedingCoeff=0.4168;MQ=35.63;MQ0=179;MQRankSum=-2.248;QD=6.25;ReadPosRankSum=-0.799;VQSLOD=1.0735;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,15:3:9.02:91,9,0	0/1:7,1:8:9.49:9,0,118	./.	0/1:13,0:3:5.84:6,0,17	0/1:19,2:19:10.43:10,0,102	1/1:3,7:5:11.95:101,12,0	1/1:7,10:8:6.48:61,6,0	1/1:14,9:3:6.01:61,6,0	1/1:6,10:10:15.03:151,15,0	0/0:15,0:13:26.65:0,27,193	0/0:13,0:13:8.95:0,9,70	1/1:4,11:11:20.96:192,21,0	1/1:3,10:6:2.80:30,3,0	0/1:7,11:7:0.13:0,0,0	./.	0/0:14,0:12:5.60:0,6,46	./.	./.	0/0:12,2:8:19.97:0,20,145	1/1:6,15:21:37.28:357,37,0	./.	1/1:5,12:15:17.78:182,18,0	0/1:3,17:19:5.23:121,0,5	1/1:3,8:4:8.98:80,9,0	1/1:6,16:20:3.82:219,4,0	1/1:8,18:16:33.02:318,33,0	1/1:5,12:11:11.75:122,12,0	1/1:3,6:4:3.01:30,3,0
chr10	20804388	.	T	TTG	1351.97	PASS	AB=0.896;AC=13;AF=0.232;AN=56;BaseQRankSum=-3.589;DP=701;FS=0.000;HRun=0;HaplotypeScore=136.5807;InbreedingCoeff=0.4262;MQ=58.93;MQ0=22;MQRankSum=0.302;QD=6.38;ReadPosRankSum=-0.802;VQSLOD=2.9446;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,1:39:19.63:0,20,676	1/1:6,4:10:2.58:153,3,0	0/1:39,0:22:6.03:6,0,37	0/0:45,0:26:2.86:0,3,15	0/1:9,7:17:24.65:190,0,25	0/0:30,0:28:33.80:0,34,464	0/0:27,0:24:48.12:0,48,557	0/0:27,0:27:41.94:0,42,450	0/0:28,0:28:60.15:0,60,676	0/1:25,6:27:55.46:484,0,55	1/1:6,11:17:9.03:140,9,0	0/0:23,0:23:42.12:0,42,484	1/1:10,6:15:23.75:274,24,0	0/0:22,0:20:48.08:0,48,516	0/0:10,0:20:23.01:0,23,136	0/1:13,1:14:23.03:23,0,187	0/0:26,0:27:35.73:0,36,353	0/0:32,0:29:55.06:0,55,615	1/1:12,7:17:18.19:228,18,0	0/0:17,0:18:41.79:0,42,441	0/1:48,0:41:18.29:18,0,403	0/0:17,0:17:26.80:0,27,284	0/0:17,0:17:18.05:0,18,205	0/0:36,0:33:53.92:0,54,583	0/0:20,0:20:30.07:0,30,331	0/0:28,0:28:33.40:0,33,550	0/0:12,0:11:21.05:0,21,232	0/0:17,0:16:41.45:0,41,436
chr10	20804433	.	G	GTA	5448.87	PASS	AB=0.853;AC=30;AF=0.536;AN=56;BaseQRankSum=-6.656;DP=674;FS=14.349;HRun=0;HaplotypeScore=101.2509;InbreedingCoeff=0.4640;MQ=37.46;MQ0=136;MQRankSum=2.179;QD=14.38;ReadPosRankSum=2.782;VQSLOD=3.6695;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:23,6:22:31.14:304,31,0	0/0:6,0:5:6.40:0,6,42	0/0:64,0:3:9.03:0,9,137	0/0:76,0:9:23.15:0,23,285	0/0:16,0:14:11.75:0,12,87	1/1:13,3:13:29.83:382,30,0	0/1:22,6:21:12.57:172,0,13	1/1:17,41:45:99:1565,101,0	1/1:15,3:16:31.03:381,31,0	0/0:21,0:13:29.32:0,29,250	0/0:6,0:3:5.99:0,6,49	0/1:14,4:12:45.61:217,0,46	0/1:12,2:12:34.02:34,0,65	1/1:10,7:11:15.27:293,15,0	1/1:14,1:14:6.41:144,6,0	0/0:17,0:15:31.40:0,31,389	0/0:35,0:30:69.81:0,70,862	0/0:34,0:32:47.97:0,48,755	0/0:18,0:3:8.98:0,9,75	0/1:17,3:13:5.20:158,0,5	1/1:39,11:34:10.15:363,10,0	0/1:7,4:8:20.48:49,0,20	1/1:4,2:4:9.03:173,9,0	1/1:19,12:22:12.36:478,12,0	1/1:9,4:12:23.55:298,24,0	0/1:12,0:9:26.08:49,0,26	1/1:10,1:9:9.04:138,9,0	1/1:6,3:7:0.01:251,0,0
chr10	20804455	.	GTA	G	140.11	PASS	AB=0.988;AC=14;AF=0.250;AN=56;BaseQRankSum=-0.596;DP=655;FS=1.421;HRun=0;HaplotypeScore=111.6513;InbreedingCoeff=-0.2532;MQ=33.15;MQ0=135;MQRankSum=2.554;QD=0.50;ReadPosRankSum=-4.879;VQSLOD=0.8664;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:27,1:16:57.95:88,0,58	0/1:5,0:4:18.31:18,0,37	0/0:65,0:3:9.03:0,9,123	0/0:77,0:9:21.05:0,21,271	1/1:9,0:7:0.89:2,1,0	0/1:19,0:14:7.52:8,0,131	0/0:23,0:13:8.08:0,8,63	0/1:43,0:31:37.88:38,0,447	0/1:11,0:10:46.92:47,0,113	0/1:19,0:13:29.06:29,0,213	0/0:10,0:6:8.69:0,9,55	0/1:17,0:10:2.77:3,0,120	0/1:19,0:15:2.34:2,0,97	0/0:15,0:8:0.22:0,0,139	0/0:14,0:12:4.04:0,4,87	0/0:18,0:15:24.53:0,25,346	0/1:44,0:37:7.04:7,0,890	0/1:32,0:29:12.57:13,0,627	0/0:16,0:1:2.99:0,3,23	0/1:19,0:10:14:14,0,27	0/0:48,0:26:16.55:0,17,144	0/0:15,0:8:11.48:0,11,96	0/0:9,0:5:8.70:0,9,98	0/0:28,0:20:5.25:0,5,281	0/1:14,2:11:3.01:3,0,113	0/0:16,0:12:10.44:0,10,155	0/0:10,1:8:5.60:0,6,106	0/0:9,0:7:14.38:0,14,93
chr10	20804472	.	GTC	G	447.01	PASS	AB=0.954;AC=19;AF=0.365;AN=52;BaseQRankSum=5.670;DP=635;FS=10.778;HRun=0;HaplotypeScore=112.6820;InbreedingCoeff=-0.2554;MQ=31.64;MQ0=127;MQRankSum=-3.677;QD=1.14;ReadPosRankSum=-1.798;VQSLOD=0.8205;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:27,2:19:31.40:58,0,31	0/0:6,0:4:5.60:0,6,44	./.	0/1:69,0:5:10.57:13,0,11	0/0:17,0:15:4.25:0,4,38	0/1:17,2:13:33:43,0,33	0/1:21,0:12:0.30:9,0,0	0/0:21,0:8:12.31:0,12,92	0/1:11,1:11:4.14:4,0,8	0/1:28,0:18:61.66:62,0,255	0/0:11,0:7:9.02:0,9,98	0/1:16,0:9:8.17:8,0,38	1/1:16,0:12:3.91:56,4,0	0/1:18,1:13:23.05:23,0,64	0/0:16,0:14:17.80:0,18,272	0/1:13,1:12:5.30:5,0,244	0/0:42,1:38:2.70:0,3,1022	0/0:32,0:30:23.96:0,24,634	0/1:22,0:6:22.15:22,0,45	0/0:19,0:10:1.16:0,1,4	0/1:43,3:26:36.84:37,0,124	1/1:14,0:7:8.02:36,8,0	./.	0/1:22,1:18:19.49:19,0,80	0/0:13,0:8:5.99:0,6,51	0/1:20,1:16:99:115,0,149	0/1:9,2:10:12.24:27,0,12	0/1:10,0:9:25.89:57,0,26
chr10	20804474	.	CTG	C	1047.22	PASS	AB=0.824;AC=25;AF=0.500;AN=50;BaseQRankSum=6.228;DP=620;FS=1.565;HRun=0;HaplotypeScore=107.4931;InbreedingCoeff=0.4677;MQ=31.71;MQ0=125;MQRankSum=-2.695;QD=3.84;ReadPosRankSum=-1.950;VQSLOD=2.2992;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:17,13:20:7.92:90,8,0	0/0:5,0:4:5.99:0,6,50	./.	0/0:67,0:3:3:0,3,25	0/0:18,0:15:6:0,6,52	1/1:10,8:12:12.02:118,12,0	1/1:11,7:11:1.12:31,1,0	1/1:21,0:8:2.92:17,3,0	./.	0/0:25,0:18:27.67:0,28,232	0/0:7,0:7:9:0,9,79	1/1:11,5:9:6.02:69,6,0	1/1:9,6:11:7.92:116,8,0	1/1:13,5:12:5.61:68,6,0	0/0:15,0:13:18.05:0,18,212	0/1:11,2:11:19.58:20,0,163	0/0:45,0:39:49.91:0,50,832	0/0:31,0:29:39.10:0,39,537	0/0:22,0:7:5.84:0,6,35	0/0:11,9:10:2.98:0,3,23	0/1:39,6:24:24.73:57,0,25	1/1:8,6:7:9.03:101,9,0	./.	1/1:21,2:18:8.90:86,9,0	0/0:5,5:5:0:0,0,1	0/1:13,8:16:20.99:254,0,21	1/1:7,4:10:11.84:103,12,0	1/1:6,4:9:9.01:86,9,0
chr10	20804523	.	CTGTG	C	6277.36	PASS	AB=0.633;AC=34;AF=0.607;AN=56;BaseQRankSum=2.821;DP=805;FS=1.520;HRun=0;HaplotypeScore=174.0708;InbreedingCoeff=0.7687;MQ=41.48;MQ0=59;MQRankSum=-0.657;QD=13.19;ReadPosRankSum=-0.543;VQSLOD=4.6754;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:15,33:42:35.46:634,35,0	0/0:8,0:7:11.97:0,12,196	0/0:58,0:8:12.36:0,12,111	0/0:74,0:9:2.10:0,2,56	0/0:12,0:23:24.08:0,24,460	1/1:13,16:25:14.65:245,15,0	0/1:17,14:24:5.35:152,0,5	1/1:37,5:29:28.92:352,29,0	1/1:5,20:24:27.87:438,28,0	0/0:24,0:23:40.23:0,40,531	0/0:11,0:14:27.06:0,27,426	1/1:10,9:19:29.31:424,29,0	1/1:10,3:12:0.78:182,1,0	1/1:3,10:13:12.36:217,12,0	0/1:8,3:30:61.26:73,0,61	0/0:17,0:16:27.09:0,27,624	0/0:44,0:42:70.19:0,70,1203	0/0:27,0:33:48.83:0,49,961	0/0:16,0:16:18.38:0,18,262	1/1:9,15:22:19.75:301,20,0	1/1:31,17:33:28.46:498,28,0	1/1:9,18:23:29.88:467,30,0	1/1:6,8:13:12.04:196,12,0	1/1:10,23:31:30.49:627,30,0	1/1:7,7:11:11.61:196,12,0	1/1:10,14:23:24.32:691,24,0	1/1:9,13:22:33.50:436,34,0	1/1:3,5:6:9.03:147,9,0
chr10	20806137	.	TATCCATCC	T	7512.07	PASS	AC=36;AF=0.667;AN=54;BaseQRankSum=4.457;DP=567;FS=2.409;HRun=0;HaplotypeScore=146.6463;InbreedingCoeff=0.9209;MQ=59.21;MQ0=7;MQRankSum=-6.089;QD=22.09;ReadPosRankSum=-1.385;VQSLOD=4.4306;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:12,10:22:27.09:541,27,0	./.	0/0:39,0:21:24.04:0,24,512	0/0:49,0:24:30.03:0,30,541	0/0:9,0:14:14.70:0,15,121	1/1:5,4:9:12.04:289,12,0	1/1:6,16:22:23.86:575,24,0	1/1:15,10:25:30.10:637,30,0	1/1:6,15:21:24.55:576,25,0	0/0:11,0:26:41.46:0,41,359	0/0:9,0:16:17.98:0,18,150	1/1:11,11:22:36.12:878,36,0	1/1:9,12:21:27.05:633,27,0	1/1:6,11:17:30.10:755,30,0	1/1:15,0:15:27.04:430,27,0	0/0:15,0:15:30.09:0,30,1025	0/0:30,0:29:63.15:0,63,1743	0/0:17,0:17:32.86:0,33,1258	0/0:13,0:17:15:0,15,140	1/1:3,7:10:21:320,21,0	1/1:11,26:37:15.05:199,15,0	1/1:6,3:9:9.92:218,10,0	1/1:6,7:13:5.91:56,6,0	1/1:15,10:25:6.02:153,6,0	1/1:10,16:26:21.05:336,21,0	1/1:7,9:16:21.05:459,21,0	1/1:8,2:10:12.04:304,12,0	1/1:16,4:20:6.02:153,6,0
chr10	20806160	.	CCATCCATCCACCCACCA	C	1996.39	PASS	AB=1.000;AC=13;AF=0.241;AN=54;BaseQRankSum=1.678;DP=508;FS=19.743;HRun=0;HaplotypeScore=211.6618;InbreedingCoeff=-0.1121;MQ=54.40;MQ0=12;MQRankSum=-2.552;QD=11.74;ReadPosRankSum=1.120;VQSLOD=1.4048;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:35.59:0,36,970	./.	0/0:48,0:22:44.01:0,44,1246	0/0:57,0:28:75.27:0,75,2059	0/0:13,0:13:24.05:0,24,930	0/1:8,0:8:99:171,0,223	0/0:26,0:26:47.71:0,48,1296	0/1:19,0:19:99:202,0,700	0/1:18,0:18:27.70:28,0,535	0/0:22,0:22:50.59:0,51,1667	0/0:13,0:13:26.81:0,27,1162	0/1:20,0:20:28.20:28,0,1107	0/0:18,0:18:35.95:0,36,904	0/1:13,0:13:99:136,0,316	1/1:1,16:17:27.09:1187,27,0	0/0:11,0:11:33.10:0,33,1959	0/0:25,0:24:69.10:0,69,3538	0/0:16,0:16:39.13:0,39,2424	0/0:13,0:12:30.08:0,30,701	0/1:12,0:11:99:120,0,469	0/0:32,0:31:24.08:0,24,778	0/1:11,0:11:65.36:65,0,326	0/1:10,0:10:3.93:4,0,289	0/0:19,0:19:17.42:0,17,473	0/1:22,0:22:99:110,0,685	0/1:13,0:13:37.78:38,0,811	0/1:7,0:7:62.12:62,0,175	0/0:7,0:7:6.02:0,6,124
chr10	20806164	.	CCATCCA	C	1813.71	PASS	AB=0.965;AC=18;AF=0.321;AN=56;BaseQRankSum=11.382;DP=500;FS=30.188;HRun=0;HaplotypeScore=131.3086;InbreedingCoeff=-0.1897;MQ=54.34;MQ0=11;MQRankSum=-6.881;QD=7.62;ReadPosRankSum=8.348;VQSLOD=0.5285;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:15,2:17:99:109,0,147	0/0:1,0:1:3.01:0,3,48	0/0:48,0:23:65.91:0,66,1195	0/0:58,0:29:78.25:0,78,1421	0/0:12,0:12:22.39:0,22,191	0/1:8,0:8:76.97:77,0,78	0/1:26,0:26:99:132,0,430	0/1:17,0:17:99:107,0,246	0/1:17,0:17:75.50:166,0,75	0/0:21,0:21:49.33:0,49,343	0/0:12,0:12:22.01:0,22,204	0/1:16,3:19:99:266,0,147	0/1:16,1:17:99:194,0,138	0/1:13,1:14:60.75:246,0,61	1/1:17,0:17:22.14:247,22,0	0/0:11,0:11:33.10:0,33,1004	0/0:22,0:21:66.23:0,66,1946	0/0:16,0:16:39.11:0,39,1251	0/0:15,0:14:37.79:0,38,491	0/1:14,0:13:28.25:28,0,130	0/0:36,0:35:33.03:0,33,328	0/1:9,0:10:76.43:76,0,82	0/0:10,0:10:11.53:0,12,154	0/1:18,0:18:37.80:38,0,175	0/1:20,0:20:31.27:31,0,170	0/1:13,0:13:99:113,0,186	0/1:6,1:7:76.97:94,0,77	1/1:4,0:4:6.01:56,6,0
chr10	20806176	.	CA	C	118.65	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.277;DP=492;FS=5.822;HRun=1;HaplotypeScore=106.8273;InbreedingCoeff=0.7494;MQ=58.07;MQ0=6;MQRankSum=-4.732;QD=6.98;ReadPosRankSum=2.794;VQSLOD=1.0282;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:38.68:0,39,607	0/0:1,0:1:3.01:0,3,48	0/0:42,2:24:41.23:0,41,703	0/0:41,3:25:56.38:0,56,928	0/0:11,1:12:24.08:0,24,377	0/0:11,0:11:32.03:0,32,391	0/0:28,0:28:60.20:0,60,945	0/0:18,0:18:48.58:0,49,733	0/0:15,0:15:32.70:0,33,475	0/0:16,0:16:44.81:0,45,600	0/0:13,0:13:27.09:0,27,418	0/0:28,0:28:70.10:0,70,989	0/0:17,0:17:42.11:0,42,597	0/0:13,0:13:34.88:0,35,438	1/1:17,0:17:24.96:212,25,0	0/0:9,0:9:27.09:0,27,431	0/0:21,0:20:26.72:0,27,816	0/0:14,0:14:42.14:0,42,670	0/0:20,0:20:60.18:0,60,918	0/0:16,0:15:30.57:0,31,434	0/0:29,1:30:45.11:0,45,680	0/0:16,0:16:26.51:0,27,350	0/0:9,0:9:12.04:0,12,191	0/0:18,0:18:24.07:0,24,374	0/0:15,0:15:32.70:0,33,474	0/0:13,0:13:38.80:0,39,572	0/0:8,0:8:19.60:0,20,248	0/0:4,0:4:6.02:0,6,93
chr10	20809447	.	GAAAA	G	11795.64	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=8.012;DP=644;FS=0.695;HRun=14;HaplotypeScore=117.4805;InbreedingCoeff=0.9977;MQ=69.12;MQ0=4;MQRankSum=-2.063;QD=29.42;ReadPosRankSum=7.464;VQSLOD=3.4421;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,35:37:84.33:1226,84,0	0/0:9,0:12:30.02:0,30,626	0/0:21,0:14:15.98:0,16,240	0/0:14,0:11:24.88:0,25,334	0/0:19,0:20:51.17:0,51,1153	1/1:4,19:24:54.12:745,54,0	1/1:3,21:24:51.14:722,51,0	1/1:6,20:26:54.01:732,54,0	1/1:6,17:23:45.08:637,45,0	0/0:23,0:27:63.21:0,63,1344	0/0:23,0:26:63.19:0,63,1191	1/1:2,28:31:74.94:1042,75,0	1/1:3,14:17:36.06:509,36,0	1/1:4,11:16:30.02:406,30,0	0/0:32,0:34:96.33:0,96,2220	0/0:17,0:21:45.15:0,45,916	0/0:20,0:23:61.30:0,61,1367	0/0:21,0:23:64.68:0,65,1340	0/0:18,0:21:51.15:0,51,981	1/1:3,19:22:51.06:722,51,0	1/1:6,18:25:48.02:660,48,0	1/1:3,10:14:33.04:448,33,0	1/1:5,16:22:41.90:565,42,0	1/1:1,21:22:54.18:764,54,0	1/1:6,19:25:48.06:679,48,0	1/1:5,21:28:59.67:832,60,0	1/1:7,19:27:40.25:555,40,0	1/1:4,14:18:39.07:552,39,0
chr10	20810017	.	TA	T	8007.70	PASS	AB=1.000;AC=47;AF=0.839;AN=56;BaseQRankSum=8.011;DP=476;FS=1.591;HRun=9;HaplotypeScore=50.9796;InbreedingCoeff=0.8303;MQ=72.12;MQ0=3;MQRankSum=-0.062;QD=20.17;ReadPosRankSum=-1.038;VQSLOD=4.9131;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,26:31:53.83:612,54,0	1/1:1,8:9:21.01:191,21,0	0/1:25,0:15:20.77:21,0,161	0/0:15,1:8:11.14:0,11,93	1/1:1,33:34:93.04:851,93,0	1/1:2,21:23:54.03:494,54,0	1/1:0,8:8:21.01:192,21,0	1/1:5,24:29:72.01:654,72,0	1/1:3,6:9:18:165,18,0	1/1:2,25:27:75.01:678,75,0	1/1:4,14:18:42.02:384,42,0	1/1:1,8:9:18.01:165,18,0	1/1:3,12:15:36.02:329,36,0	1/1:4,13:17:24:220,24,0	1/1:3,13:16:33.01:302,33,0	0/0:16,0:16:45.12:0,45,509	0/0:22,0:22:63.19:0,63,727	0/0:25,0:25:69.20:0,69,796	1/1:2,15:17:33.29:366,33,0	1/1:1,8:9:21.01:192,21,0	1/1:2,4:6:9:82,9,0	1/1:1,7:8:18.01:165,18,0	1/1:1,8:9:18.01:164,18,0	1/1:1,6:7:15.01:137,15,0	1/1:1,12:13:30.02:275,30,0	1/1:0,23:23:69.03:628,69,0	1/1:3,20:23:57.02:522,57,0	1/1:0,12:12:24.01:220,24,0
chr10	20811553	.	G	GGT	106.41	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-1.489;DP=430;FS=2.050;HRun=0;HaplotypeScore=88.0776;InbreedingCoeff=0.7657;MQ=59.56;MQ0=1;MQRankSum=0.832;QD=7.60;ReadPosRankSum=-1.719;VQSLOD=2.8399;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:42.10:0,42,495	0/0:3,0:3:6.02:0,6,74	0/0:22,0:15:33.02:0,33,367	0/0:19,0:18:29.29:0,29,316	0/0:14,0:14:26.97:0,27,280	0/0:14,0:14:24.03:0,24,277	0/0:20,0:20:54:0,54,640	0/0:14,0:14:18.04:0,18,209	0/0:11,0:11:20.84:0,21,216	0/0:16,0:16:42.12:0,42,508	0/0:4,0:4:8.98:0,9,83	0/0:20,0:20:42.12:0,42,510	0/0:22,0:22:51.08:0,51,584	0/0:28,0:28:66.14:0,66,787	1/1:4,10:14:12.04:192,12,0	0/0:14,0:14:33.07:0,33,393	0/0:14,0:14:33.10:0,33,408	0/0:16,0:16:42.11:0,42,505	0/0:9,0:9:18.06:0,18,223	0/0:6,0:6:12.04:0,12,144	0/0:40,0:40:78.01:0,78,952	0/0:12,0:12:30.05:0,30,349	0/0:12,0:12:30.06:0,30,346	0/0:14,0:14:27.07:0,27,319	0/0:12,0:12:30.09:0,30,363	0/0:18,0:18:45.14:0,45,552	0/0:10,0:10:27.07:0,27,317	0/0:11,0:11:12.04:0,12,148
chr10	20811568	.	TG	T	4925.75	PASS	AB=0.882;AC=36;AF=0.643;AN=56;BaseQRankSum=1.438;DP=408;FS=2.908;HRun=10;HaplotypeScore=58.1847;InbreedingCoeff=0.7469;MQ=60.49;MQ0=1;MQRankSum=-3.689;QD=17.53;ReadPosRankSum=3.578;VQSLOD=5.4668;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,18:21:47.80:398,48,0	0/0:5,0:5:3.01:0,3,33	0/0:26,0:20:40.39:0,40,375	0/0:16,0:15:24.59:0,25,255	0/1:12,2:14:11.06:11,0,102	1/1:2,11:13:17.90:149,18,0	1/1:3,17:20:53.83:451,54,0	1/1:2,16:18:41.68:364,42,0	1/1:1,6:8:23.80:188,24,0	0/0:18,0:18:27.07:0,27,298	0/0:6,0:6:0:0,0,0	1/1:1,17:18:47.91:408,48,0	1/1:2,18:20:47.91:408,48,0	1/1:2,22:24:50.97:442,51,0	0/0:15,0:15:4.94:0,5,183	0/0:13,0:13:27.07:0,27,299	0/0:16,0:16:32.98:0,33,320	0/1:14,2:16:15.98:16,0,293	0/0:10,0:10:16.99:0,17,187	1/1:1,3:4:9:78,9,0	1/1:8,25:33:62.81:529,63,0	1/1:1,9:10:26.99:234,27,0	1/1:1,9:10:26.98:231,27,0	1/1:3,7:10:14.99:130,15,0	1/1:1,11:12:32.88:271,33,0	1/1:3,13:16:8.84:305,9,0	1/1:0,8:8:20.99:182,21,0	1/1:0,6:6:15:130,15,0
chr10	20811615	.	T	TTGGCTTACGCGTATCCTCCAAAGA	1236.19	PASS	AB=0.690;AC=20;AF=0.909;AN=22;BaseQRankSum=-1.926;DP=24;FS=3.245;HRun=0;HaplotypeScore=39.0052;InbreedingCoeff=-0.2612;MQ=174.48;MQ0=0;MQRankSum=-0.598;QD=53.75;ReadPosRankSum=0.066;VQSLOD=1.7058;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,0:2:3:25,3,0	./.	0/1:3,1:6:12.43:631,0,12	0/1:3,0:5:7.07:169,0,7	./.	./.	1/1:2,0:2:5.99:79,6,0	1/1:1,0:1:3:26,3,0	./.	1/1:1,0:1:3.01:109,3,0	./.	1/1:1,0:1:2.97:20,3,0	./.	1/1:1,0:1:3.01:105,3,0	./.	./.	./.	1/1:1,0:1:2.97:20,3,0	1/1:1,0:1:3.01:70,3,0	./.	1/1:2,0:2:3.01:64,3,0	./.	./.	./.	./.	./.	./.	./.
chr10	20811778	.	AATACACACACAC	A	1371.96	PASS	AB=1.000;AC=32;AF=0.615;AN=52;BaseQRankSum=8.799;DP=400;FS=22.190;HRun=0;HaplotypeScore=155.9267;InbreedingCoeff=0.5678;MQ=67.59;MQ0=1;MQRankSum=-6.396;QD=5.18;ReadPosRankSum=-0.932;VQSLOD=1.2343;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:28:14.22:48,14,0	0/1:6,0:6:2.66:3,0,25	0/0:32,0:23:51.15:0,51,1717	0/0:20,0:15:35.82:0,36,539	0/0:11,0:11:15.04:0,15,222	1/1:13,0:13:7.11:24,7,0	1/1:20,0:20:19.90:70,20,0	0/1:28,0:28:99:217,0,200	1/1:13,0:13:14.80:58,15,0	0/1:8,0:8:8.88:9,0,182	0/0:4,0:4:3.01:0,3,30	1/1:10,0:10:9.49:32,9,0	1/1:16,0:16:19.61:103,20,0	1/1:11,0:11:16.60:56,17,0	1/1:4,16:20:21.07:751,21,0	0/0:24,0:24:51.17:0,51,2995	0/0:19,0:19:54.11:0,54,2541	0/0:10,0:10:27.09:0,27,1564	0/0:13,0:13:9.31:0,9,209	1/1:2,0:2:2.98:22,3,0	1/1:28,0:28:9.49:32,9,0	./.	./.	1/1:24,0:24:7.11:24,7,0	1/1:6,0:6:7.11:24,7,0	0/1:13,0:13:28.09:28,0,99	1/1:11,0:11:4.74:16,5,0	1/1:8,0:8:11.86:40,12,0
chr10	20811784	.	CACACACAT	C	7314.23	PASS	AB=0.967;AC=40;AF=0.769;AN=52;BaseQRankSum=7.788;DP=433;FS=15.527;HRun=0;HaplotypeScore=110.0554;InbreedingCoeff=0.6355;MQ=62.53;MQ0=4;MQRankSum=-6.624;QD=23.07;ReadPosRankSum=0.131;VQSLOD=3.0325;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:7,20:27:18.06:489,18,0	1/1:4,1:5:5.99:103,6,0	0/0:39,0:22:57.14:0,57,1383	0/0:22,0:16:38.74:0,39,497	0/1:14,0:14:14.41:51,0,14	1/1:3,10:13:9.03:245,9,0	1/1:2,18:21:25.65:732,26,0	1/1:2,30:32:89.58:1046,90,0	1/1:0,15:15:17.99:426,18,0	1/1:8,0:8:6.31:127,6,0	1/1:7,0:7:2.98:22,3,0	1/1:2,11:13:12.04:326,12,0	1/1:3,15:18:24.08:630,24,0	1/1:0,13:13:21.07:571,21,0	1/1:18,0:18:21.07:403,21,0	0/0:24,0:24:54.18:0,54,2279	0/0:21,0:21:53.01:0,53,1749	0/0:10,0:10:27.09:0,27,1119	0/1:13,1:14:99:125,0,120	1/1:1,0:1:2.98:22,3,0	1/1:6,29:35:12.04:326,12,0	./.	./.	1/1:4,21:25:9.03:244,9,0	1/1:1,5:6:9.03:245,9,0	1/1:11,3:14:38.91:554,39,0	1/1:6,5:11:8.80:219,9,0	1/1:0,7:7:15.05:408,15,0
chr10	20811786	.	CACACAT	C	5537.63	PASS	AB=0.700;AC=41;AF=0.788;AN=52;BaseQRankSum=9.211;DP=428;FS=12.015;HRun=0;HaplotypeScore=103.2263;InbreedingCoeff=0.7434;MQ=60.19;MQ0=7;MQRankSum=-6.426;QD=17.92;ReadPosRankSum=-0.607;VQSLOD=3.3474;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:25:18.06:280,18,0	1/1:1,4:5:6.02:115,6,0	0/0:42,0:21:56.90:0,57,1080	0/0:23,0:16:38.70:0,39,436	1/1:3,9:12:14.64:249,15,0	1/1:11,0:11:9.03:140,9,0	1/1:19,0:20:25.65:417,26,0	1/1:32,0:32:89.51:790,90,0	1/1:15,0:15:17.99:251,18,0	1/1:0,8:8:24.02:375,24,0	1/1:0,7:7:3.01:69,3,0	1/1:12,0:12:12.04:186,12,0	1/1:18,0:18:24.08:371,24,0	1/1:13,0:13:21.07:326,21,0	1/1:18,0:18:21.07:305,21,0	0/0:23,0:23:54.18:0,54,1828	0/0:21,0:21:52.98:0,53,1408	0/0:10,0:10:27.09:0,27,897	0/1:8,6:14:52.38:319,0,52	1/1:2,0:2:5.98:46,6,0	1/1:35,0:35:12.04:186,12,0	./.	./.	1/1:25,0:25:9.03:139,9,0	1/1:6,0:6:9.03:140,9,0	1/1:4,11:15:38.95:485,39,0	1/1:9,0:9:8.76:116,9,0	1/1:7,0:7:15.05:233,15,0
chr10	20812617	.	GTCTCCGTCTC	G	2960.82	PASS	AB=0.846;AC=29;AF=0.558;AN=52;BaseQRankSum=3.470;DP=519;FS=4.551;HRun=0;HaplotypeScore=149.7261;InbreedingCoeff=0.5275;MQ=47.59;MQ0=29;MQRankSum=-1.638;QD=11.26;ReadPosRankSum=-1.452;VQSLOD=2.3074;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:15,2:19:18.03:287,18,0	0/0:11,0:11:9.98:0,10,258	0/0:33,0:12:31.68:0,32,429	0/0:43,0:15:20.59:0,21,338	1/1:21,0:20:0.47:1,0,0	./.	1/1:1,23:23:2.35:94,2,0	1/1:4,0:21:49.31:542,49,0	1/1:3,0:11:3:25,3,0	0/1:17,0:16:6.06:6,0,253	1/1:8,0:7:0.34:1,0,0	0/1:2,2:14:9.60:119,0,10	1/1:2,14:18:8.97:104,9,0	1/1:13,4:18:13.86:229,14,0	0/0:20,0:20:33.30:0,33,699	0/0:24,0:23:39.16:0,39,1594	0/0:30,0:30:77.07:0,77,2172	0/0:15,0:15:32.20:0,32,969	0/1:22,0:20:23.24:23,0,298	1/1:1,11:13:3.01:37,3,0	0/0:1,12:14:0.47:0,0,2	0/0:4,13:18:0.47:0,0,1	./.	0/0:7,0:19:0.47:0,0,1	1/1:8,0:8:6.02:73,6,0	1/1:4,2:22:27.04:920,27,0	1/1:2,8:12:10.41:564,10,0	1/1:13,0:13:8.24:104,8,0
chr10	20812621	.	CCG	C	2306.73	PASS	AB=0.847;AC=33;AF=0.635;AN=52;BaseQRankSum=5.951;DP=505;FS=19.360;HRun=0;HaplotypeScore=112.2189;InbreedingCoeff=0.4195;MQ=46.67;MQ0=33;MQRankSum=-2.617;QD=7.56;ReadPosRankSum=-1.279;VQSLOD=1.8698;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,3:18:18.06:261,18,0	0/1:11,1:12:18.47:18,0,28	0/0:31,0:12:31.89:0,32,430	0/0:40,0:12:20.59:0,21,336	1/1:18,3:20:0.47:1,0,0	./.	1/1:24,0:23:2.68:25,3,0	1/1:20,0:19:40.57:622,41,0	1/1:10,0:9:2.94:18,3,0	0/1:16,1:16:60.64:61,0,82	1/1:8,0:6:0.34:1,0,0	1/1:13,0:13:6:62,6,0	1/1:17,0:16:8.90:105,9,0	1/1:18,0:18:23.58:296,24,0	0/0:12,8:20:15.39:0,15,432	0/0:24,0:23:55.99:0,56,901	0/0:30,0:30:39.97:0,40,935	0/0:15,0:15:17.35:0,17,478	0/1:21,3:22:63.66:194,0,64	1/1:13,0:13:3.01:37,3,0	1/1:13,1:14:0.47:1,0,0	0/0:14,0:14:0:0,0,0	./.	0/1:18,2:19:0:0,0,0	1/1:0,9:9:6.02:68,6,0	1/1:20,1:21:11.04:475,11,0	1/1:14,0:12:12.58:178,13,0	0/1:3,9:12:28.91:47,0,29
chr10	20812639	.	C	CCG	259.68	PASS	AB=0.834;AC=5;AF=0.096;AN=52;BaseQRankSum=2.992;DP=517;FS=18.749;HRun=0;HaplotypeScore=133.0416;InbreedingCoeff=0.0785;MQ=42.73;MQ0=33;MQRankSum=-4.943;QD=4.33;ReadPosRankSum=-0.672;VQSLOD=1.8206;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:17:8.62:0,9,121	0/1:6,7:13:99:133,0,144	./.	./.	0/0:23,1:24:8.93:0,9,134	0/0:18,0:18:12.04:0,12,183	0/0:24,0:23:2.95:0,3,37	0/0:22,0:21:54.04:0,54,688	0/0:14,0:13:6.01:0,6,83	0/1:15,2:16:99:161,0,242	1/1:8,0:6:5.56:39,6,0	0/0:14,0:14:12.04:0,12,143	0/0:19,0:18:11.85:0,12,133	0/0:17,0:17:17.42:0,17,244	0/0:21,0:21:23.78:0,24,315	0/0:35,0:34:76.56:0,77,1189	0/0:30,0:30:72.03:0,72,888	0/0:16,0:15:42.05:0,42,536	0/1:21,1:20:36.18:36,0,498	0/0:14,0:14:2.95:0,3,46	0/0:19,0:19:5.92:0,6,81	0/0:16,0:16:2.86:0,3,46	0/0:13,0:13:2.91:0,3,46	0/0:25,0:24:5.85:0,6,64	0/0:8,0:8:6.01:0,6,71	0/0:25,0:25:64.90:0,65,755	0/0:19,0:17:38.09:0,38,471	0/0:9,0:9:12:0,12,145
chr10	20814403	.	G	GTACA	8150.43	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=13.516;DP=757;FS=7.674;HRun=0;HaplotypeScore=133.0397;InbreedingCoeff=0.9995;MQ=82.80;MQ0=0;MQRankSum=-4.232;QD=51.59;ReadPosRankSum=1.153;VQSLOD=6.0078;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:65,0:65:99:0,172,3041	1/1:4,9:13:24.08:623,24,0	0/0:23,0:23:45.15:0,45,790	0/0:23,0:23:48.16:0,48,850	1/1:10,31:42:65.96:1701,66,0	0/0:21,0:21:57.20:0,57,1010	0/0:23,0:23:57.20:0,57,1024	0/0:30,0:30:75.25:0,75,1284	0/0:24,0:23:69.24:0,69,1233	1/1:6,22:28:75.18:1682,75,0	1/1:6,17:23:45.15:1165,45,0	0/0:16,0:16:42.14:0,42,755	0/0:18,0:18:51.16:0,51,889	0/0:29,0:29:84.29:0,84,1510	1/1:6,24:30:69.24:1790,69,0	0/0:30,0:30:87.30:0,87,1564	0/0:27,0:27:72.23:0,72,1265	0/0:14,0:14:36.12:0,36,647	1/1:9,13:22:51.17:1190,51,0	0/0:28,0:28:66.23:0,66,1186	0/0:39,0:39:99:0,114,2020	0/0:29,0:29:75.26:0,75,1348	0/0:33,0:33:93.32:0,93,1665	0/0:35,0:35:99:0,99,1678	0/0:17,0:17:42.14:0,42,755	0/0:36,0:36:90.31:0,90,1610	0/0:25,0:24:69.24:0,69,1240	0/0:14,0:14:33.11:0,33,592
chr10	20815055	.	G	GGGCAAGTCAGCT	14031.30	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=5.173;DP=617;FS=2.418;HRun=0;HaplotypeScore=213.7929;InbreedingCoeff=0.9977;MQ=77.77;MQ0=0;MQRankSum=-13.732;QD=115.96;ReadPosRankSum=-3.407;VQSLOD=4.3297;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,117,3966	1/1:6,9:19:48.16:2571,48,0	0/0:14,0:14:36.04:0,36,827	0/0:19,0:17:18.09:0,18,858	1/1:7,6:13:27.05:1066,27,0	0/0:23,0:23:63.20:0,63,2115	0/0:24,0:24:63.22:0,63,2325	0/0:27,0:27:66.23:0,66,2165	0/0:15,0:15:42.14:0,42,1566	1/1:11,12:25:72.23:3708,72,0	1/1:7,5:13:24.04:1263,24,0	0/0:22,0:22:66.20:0,66,2242	0/0:21,0:21:60.21:0,60,2237	0/0:17,0:17:48.15:0,48,1702	1/1:17,9:30:63.22:3611,63,0	0/0:17,0:17:45.15:0,45,1673	0/0:32,0:32:84.29:0,84,2999	0/0:22,0:22:66.23:0,66,2274	1/1:18,3:21:42.14:1812,42,0	0/0:14,0:14:42.14:0,42,1479	0/0:41,0:41:99:0,114,4077	0/0:24,0:24:69.24:0,69,2365	0/0:16,0:16:48.16:0,48,1714	0/0:25,0:25:69.22:0,69,2354	0/0:22,0:22:60.18:0,60,2078	0/0:20,0:20:51.16:0,51,1737	0/0:23,0:22:66.22:0,66,2355	0/0:18,0:18:48.16:0,48,1791
chr10	20815179	.	A	AC	4540.67	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=15.853;DP=679;FS=5.293;HRun=0;HaplotypeScore=91.4266;InbreedingCoeff=0.9996;MQ=92.44;MQ0=0;MQRankSum=-5.726;QD=39.14;ReadPosRankSum=1.431;VQSLOD=5.2089;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,123,1659	1/1:0,10:10:27.09:382,27,0	0/0:34,0:34:96.29:0,96,1314	0/0:26,0:26:66.15:0,66,836	1/1:0,27:27:72.24:1019,72,0	0/0:34,0:34:99:0,99,1384	0/0:22,0:22:63.20:0,63,865	0/0:24,0:24:66.22:0,66,923	0/0:27,0:27:78.25:0,78,1073	1/1:0,23:23:66.19:891,66,0	1/1:0,15:15:45.15:638,45,0	0/0:19,0:19:57.18:0,57,780	0/0:17,0:17:51.15:0,51,694	0/0:17,0:17:51.17:0,51,713	1/1:1,26:27:77.28:1109,77,0	0/0:23,0:23:66.19:0,66,875	0/0:41,0:41:99:0,120,1677	0/0:32,0:32:93.23:0,93,1239	1/1:1,13:14:38.68:501,39,0	0/0:24,0:24:72.20:0,72,955	0/0:34,0:34:99:0,102,1369	0/0:26,0:26:78.25:0,78,1076	0/0:18,0:18:48.15:0,48,652	0/0:34,0:34:96.32:0,96,1342	0/0:19,0:19:54.17:0,54,738	0/0:24,0:24:72.24:0,72,1006	0/0:17,0:17:48.16:0,48,671	0/0:9,0:9:27.09:0,27,377
chr10	20815914	.	C	CT	15899.19	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-12.400;DP=633;FS=8.742;HRun=0;HaplotypeScore=55.5363;InbreedingCoeff=0.9916;MQ=89.13;MQ0=0;MQRankSum=-5.149;QD=42.74;ReadPosRankSum=1.948;VQSLOD=5.1299;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,36:36:99:1582,99,0	0/0:11,0:11:33.11:0,33,460	0/0:26,0:26:75.21:0,75,1009	0/0:21,0:21:57.18:0,57,768	0/0:30,0:30:84.26:0,84,1171	1/1:0,19:19:48.16:767,48,0	1/1:0,26:26:69.24:1103,69,0	1/1:2,25:27:78.23:1179,78,0	1/1:0,19:19:51.17:815,51,0	0/0:34,0:34:96.31:0,96,1326	0/0:14,0:14:42.14:0,42,583	1/1:1,23:24:60.20:959,60,0	1/1:0,22:23:57.19:905,57,0	1/1:0,16:16:45.15:719,45,0	0/0:22,0:22:66.21:0,66,905	0/0:24,0:24:72.23:0,72,981	0/0:31,0:31:93.27:0,93,1270	0/0:26,0:26:75.21:0,75,1026	0/0:22,0:22:63.21:0,63,879	1/1:0,29:29:81.28:1292,81,0	1/1:0,38:38:99:1678,105,0	1/1:0,23:23:57.19:897,57,0	1/1:0,17:17:45.15:706,45,0	1/1:1,13:13:36.12:575,36,0	1/1:1,18:19:48.16:756,48,0	1/1:0,22:22:66.19:1006,66,0	1/1:0,17:17:51.17:815,51,0	1/1:0,3:3:9.03:144,9,0
chr10	20819641	.	T	TA	397.55	PASS	AC=2;AF=0.083;AN=24;BaseQRankSum=-1.731;DP=165;FS=0.000;HRun=9;HaplotypeScore=37.8349;InbreedingCoeff=0.6720;MQ=62.10;MQ0=8;MQRankSum=-1.163;QD=26.50;ReadPosRankSum=0.739;VQSLOD=3.6949;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	0/0:5,0:5:15:0,15,130	0/0:6,0:3:9:0,9,78	0/0:3,0:1:3:0,3,26	0/0:25,0:25:65.95:0,66,565	./.	./.	./.	./.	0/0:17,0:17:50.99:0,51,443	0/0:9,0:9:20.99:0,21,182	./.	./.	./.	1/1:0,14:15:45.08:484,45,0	0/0:14,0:14:38.99:0,39,339	0/0:23,0:22:53.99:0,54,469	0/0:21,0:20:47.96:0,48,416	0/0:22,0:22:59.02:0,59,499	./.	./.	./.	./.	./.	./.	0/0:1,0:1:3:0,3,26	./.	./.
chr10	20819851	.	CA	C	13210.88	PASS	AB=0.683;AC=34;AF=0.607;AN=56;BaseQRankSum=8.440;DP=603;FS=1.845;HRun=3;HaplotypeScore=83.6175;InbreedingCoeff=0.8772;MQ=64.98;MQ0=0;MQRankSum=-0.526;QD=32.54;ReadPosRankSum=0.318;VQSLOD=5.0316;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,36:37:99:1263,102,0	0/0:11,0:11:33.11:0,33,474	0/0:4,0:4:12.04:0,12,161	0/1:6,2:10:25.77:26,0,92	0/0:33,0:33:87.22:0,87,1206	1/1:1,23:24:63.20:779,63,0	1/1:0,23:23:60.19:743,60,0	1/1:1,30:31:90.25:1079,90,0	0/1:2,14:16:1.05:440,0,1	0/0:25,0:25:75.24:0,75,1050	0/0:22,0:22:57.12:0,57,788	1/1:0,23:23:63.16:763,63,0	1/1:0,18:18:45.14:557,45,0	1/1:0,25:25:66.17:798,66,0	0/0:22,0:22:66.19:0,66,913	0/0:17,0:17:51.16:0,51,719	0/0:37,0:36:99:0,111,1536	0/0:12,0:12:33.11:0,33,475	0/0:14,0:14:42.12:0,42,582	1/1:1,34:35:99:1224,99,0	1/1:0,15:15:45.14:558,45,0	1/1:0,25:25:72.23:888,72,0	1/1:1,27:28:78.25:964,78,0	1/1:0,13:13:36.11:446,36,0	1/1:0,19:19:54.17:667,54,0	1/1:1,24:25:32:831,32,0	1/1:2,30:32:75.24:927,75,0	1/1:1,6:7:21.07:260,21,0
chr10	20820110	.	C	CGGTG	18590.55	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=17.501;DP=586;FS=5.311;HRun=0;HaplotypeScore=190.8105;InbreedingCoeff=0.9717;MQ=83.58;MQ0=0;MQRankSum=-16.845;QD=53.73;ReadPosRankSum=-2.561;VQSLOD=4.5429;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,16:30:51.16:1260,51,0	0/0:9,0:9:27.08:0,27,467	0/0:24,0:24:33.50:0,33,826	0/0:24,0:24:63.22:0,63,1127	0/0:31,0:31:72.22:0,72,1280	1/1:8,3:11:21.06:450,21,0	1/1:11,14:25:48.16:1227,48,0	1/1:10,18:28:63.17:1599,63,0	1/1:2,22:24:69.24:1781,69,0	0/0:25,0:25:56.73:0,57,1044	0/0:17,0:17:45.15:0,45,816	1/1:3,27:30:87.16:2221,87,0	1/1:6,14:20:54.16:1250,54,0	1/1:12,22:34:87.18:1979,87,0	0/0:29,0:29:81.26:0,81,1459	0/0:18,0:18:42.14:0,42,772	0/0:27,0:27:81.28:0,81,1482	0/0:21,0:21:54.16:0,54,961	0/0:15,0:15:30.10:0,30,540	1/1:2,8:10:18.06:473,18,0	1/1:12,11:24:24.89:706,25,0	1/1:7,8:15:21.07:525,21,0	1/1:2,9:11:14.80:393,15,0	1/1:9,16:24:42.30:906,42,0	1/1:1,3:4:9.03:213,9,0	1/1:10,12:22:54.09:1172,54,0	1/1:9,22:30:90.31:2277,90,0	1/1:0,2:2:6.02:158,6,0
chr10	20820113	.	T	TGGGG	14450.02	PASS	AB=0.979;AC=30;AF=0.536;AN=56;BaseQRankSum=17.660;DP=580;FS=4.985;HRun=2;HaplotypeScore=214.1194;InbreedingCoeff=0.7131;MQ=83.59;MQ0=0;MQRankSum=-17.269;QD=42.01;ReadPosRankSum=1.089;VQSLOD=3.0964;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:32,0:32:42.20:1063,42,0	0/0:9,0:9:27.08:0,27,474	0/0:25,0:25:65.51:0,66,1021	0/0:23,0:23:66.20:0,66,1183	0/0:29,0:29:75.22:0,75,1336	0/1:10,1:11:15.91:325,0,16	0/1:24,0:24:9.02:1002,0,9	0/1:31,0:31:23.15:1250,0,23	1/1:25,0:25:55.26:1419,55,0	0/0:23,0:23:62.80:0,63,1105	0/0:17,0:17:45.15:0,45,828	1/1:30,1:31:60.54:1686,61,0	1/1:19,0:19:57.14:1019,57,0	1/1:34,0:34:49.63:1480,50,0	0/0:30,0:30:84.26:0,84,1508	0/0:16,0:16:48.11:0,48,831	0/0:28,0:28:84.27:0,84,1532	0/0:21,0:21:57.17:0,57,1025	0/0:15,0:15:32.94:0,33,567	0/1:10,0:10:2.89:350,0,3	1/1:23,0:23:14.91:533,15,0	1/1:13,1:14:9.57:445,10,0	1/1:8,0:8:14.80:310,15,0	1/1:23,0:24:42.30:696,42,0	1/1:4,0:4:9.03:159,9,0	1/1:21,0:21:48.05:843,48,0	1/1:30,1:30:90.31:1749,90,0	1/1:2,0:2:6.02:120,6,0
chr10	20820121	.	G	GC	11114.83	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=18.058;DP=508;FS=10.216;HRun=0;HaplotypeScore=160.0318;InbreedingCoeff=0.9645;MQ=86.30;MQ0=0;MQRankSum=-17.897;QD=39.00;ReadPosRankSum=-0.082;VQSLOD=2.7409;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,25:25:63.14:900,63,0	0/0:9,0:9:27.07:0,27,358	0/0:25,0:25:72.12:0,72,953	0/0:22,0:22:59.92:0,60,760	0/0:24,0:24:69.23:0,69,949	1/1:0,7:7:18.06:259,18,0	1/1:0,18:18:51.17:763,51,0	1/1:0,25:25:64.76:1064,65,0	1/1:0,21:21:63.21:937,63,0	0/0:21,0:22:59.55:0,60,785	0/0:17,0:17:48.15:0,48,647	1/1:0,26:27:81.27:1194,81,0	1/1:1,15:16:45.15:671,45,0	1/1:0,27:27:81.21:1171,81,0	0/0:29,0:29:84.25:0,84,1140	0/0:18,0:18:54.18:0,54,754	0/0:27,0:27:81.26:0,81,1116	0/0:19,0:19:57.18:0,57,781	0/0:11,0:11:33.10:0,33,441	1/1:2,9:11:26.68:368,27,0	1/1:0,18:18:28.64:345,29,0	1/1:0,10:10:30.10:447,30,0	1/1:1,6:7:20.55:258,21,0	1/1:0,20:20:30.78:570,31,0	1/1:1,4:5:8.99:111,9,0	1/1:0,17:17:51.17:758,51,0	1/1:1,29:29:84.28:1255,84,0	1/1:0,1:1:3.01:44,3,0
chr10	20820429	.	AATCG	A	8511.44	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=14.185;DP=390;FS=6.289;HRun=0;HaplotypeScore=96.6307;InbreedingCoeff=0.9336;MQ=64.32;MQ0=0;MQRankSum=-14.092;QD=46.77;ReadPosRankSum=-0.622;VQSLOD=5.3258;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,18:19:51.17:972,51,0	0/0:9,0:9:27.09:0,27,720	0/0:5,0:5:14.99:0,15,289	0/0:10,0:11:4.56:0,5,388	0/0:27,0:27:75.26:0,75,2045	1/1:3,11:14:36.10:626,36,0	1/1:1,4:5:12.04:230,12,0	1/1:4,16:20:57.13:969,57,0	1/1:2,4:6:18.01:277,18,0	0/0:26,0:26:72.20:0,72,1802	0/0:30,0:30:87.25:0,87,2180	1/1:2,6:8:21.04:337,21,0	1/1:0,7:7:21.07:401,21,0	1/1:0,9:9:24.08:452,24,0	0/0:15,0:15:45.13:0,45,1101	0/0:16,0:16:45.15:0,45,1232	0/0:21,0:21:63.20:0,63,1632	0/0:20,0:19:54.19:0,54,1426	0/0:28,0:28:81.19:0,81,1872	1/1:1,12:13:36.12:685,36,0	1/1:4,4:8:11.52:221,12,0	1/1:3,3:6:12.03:195,12,0	1/1:3,5:8:18.05:330,18,0	1/1:1,1:2:3.01:57,3,0	1/1:1,13:14:42.13:769,42,0	1/1:1,17:18:51.17:979,51,0	1/1:5,12:17:45.08:758,45,0	1/1:4,4:8:15.03:254,15,0
chr10	20820441	.	T	TA	5131.21	PASS	AB=0.733;AC=32;AF=0.571;AN=56;BaseQRankSum=14.404;DP=374;FS=6.101;HRun=5;HaplotypeScore=94.9517;InbreedingCoeff=0.6985;MQ=62.02;MQ0=1;MQRankSum=-13.749;QD=26.73;ReadPosRankSum=-1.437;VQSLOD=3.8757;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,20:23:51.04:599,51,0	0/0:8,0:8:24.05:0,24,250	0/1:5,0:4:0:0,0,0	0/0:7,0:7:4.56:0,5,36	0/0:24,0:24:63.16:0,63,677	0/1:5,10:15:7.62:246,0,8	1/1:1,4:5:12:136,12,0	1/1:7,14:21:45.10:565,45,0	1/1:2,4:6:12.04:155,12,0	0/0:24,0:24:66.16:0,66,709	0/0:27,0:27:75.19:0,75,806	0/1:2,5:7:12.67:176,0,13	1/1:0,7:7:21.07:270,21,0	1/1:2,8:10:21.07:271,21,0	0/0:15,0:15:39.08:0,39,410	0/0:18,0:18:48.10:0,48,507	0/0:19,0:19:54.14:0,54,580	0/0:16,0:15:39.10:0,39,419	0/0:24,0:24:60.14:0,60,645	1/1:2,14:16:39.13:504,39,0	0/1:4,2:6:10.13:32,0,10	1/1:3,1:4:3.01:39,3,0	1/1:3,4:7:9.03:116,9,0	1/1:1,1:2:6.02:77,6,0	1/1:4,13:17:42.14:543,42,0	1/1:3,16:19:48.16:622,48,0	1/1:3,15:18:51.13:624,51,0	1/1:0,4:4:12.04:156,12,0
chr10	20820575	.	A	AAAT	12315.86	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=14.282;DP=457;FS=63.073;HRun=0;HaplotypeScore=95.2280;InbreedingCoeff=0.9838;MQ=69.46;MQ0=0;MQRankSum=-10.099;QD=46.13;ReadPosRankSum=-3.749;VQSLOD=2.3038;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,21:21:48.08:942,48,0	0/0:12,0:11:33.11:0,33,538	0/0:11,0:10:28.56:0,29,367	0/0:10,0:10:17.24:0,17,296	0/0:34,0:34:99:0,102,1604	1/1:0,15:15:33.11:682,33,0	1/1:1,12:13:30.09:589,30,0	1/1:5,30:38:90.03:1922,90,0	1/1:0,7:8:12.04:237,12,0	0/0:22,0:22:60.20:0,60,957	0/0:17,0:17:51.17:0,51,831	1/1:0,7:7:18.06:359,18,0	1/1:2,11:13:24.05:495,24,0	1/1:0,7:7:15.05:303,15,0	0/0:10,0:10:30.09:0,30,463	0/0:10,0:10:30.09:0,30,441	0/0:25,0:25:75.25:0,75,1193	0/0:16,0:16:48.14:0,48,755	0/0:23,0:23:69.22:0,69,1082	1/1:0,34:35:96.25:1738,96,0	1/1:1,10:11:20.97:400,21,0	1/1:0,16:16:39.13:793,39,0	1/1:1,9:10:21.07:425,21,0	1/1:2,11:13:21.05:413,21,0	1/1:0,9:9:27.09:525,27,0	1/1:2,20:24:54.13:1080,54,0	1/1:2,16:20:57.19:1158,57,0	1/1:0,7:7:12.04:255,12,0
chr10	20821338	.	A	AG	9663.01	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=10.222;DP=477;FS=12.937;HRun=0;HaplotypeScore=51.7336;InbreedingCoeff=0.9421;MQ=50.90;MQ0=5;MQRankSum=-11.239;QD=36.33;ReadPosRankSum=-4.059;VQSLOD=2.3683;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,27:26:63.21:994,63,0	0/0:6,0:6:18.06:0,18,252	0/0:8,0:2:3.01:0,3,42	0/0:13,0:8:21.07:0,21,291	0/0:31,0:31:87.25:0,87,1178	1/1:0,22:22:48.16:766,48,0	1/1:2,9:11:24.08:360,24,0	1/1:4,12:12:33.11:512,33,0	1/1:0,14:14:30.10:478,30,0	0/0:16,0:15:45.15:0,45,630	0/0:17,0:17:51.17:0,51,712	1/1:0,17:17:33.11:527,33,0	1/1:0,16:16:36.12:573,36,0	1/1:0,14:13:33.11:526,33,0	0/0:17,0:17:51.15:0,51,695	0/0:18,0:18:51.17:0,51,713	0/0:34,0:34:55.37:0,55,1338	0/0:30,2:32:4.35:0,4,1121	0/0:19,0:18:51.17:0,51,712	1/1:0,23:23:51.17:801,51,0	1/1:1,4:5:9.03:143,9,0	1/1:0,8:8:21.07:335,21,0	1/1:1,15:16:39.13:621,39,0	1/1:0,10:10:30.10:479,30,0	1/1:0,24:24:48.16:766,48,0	1/1:0,16:14:42.12:637,42,0	1/1:0,19:19:54.18:860,54,0	1/1:1,7:8:18.06:285,18,0
chr10	20821442	.	GT	G	7285.53	PASS	AB=0.563;AC=33;AF=0.589;AN=56;BaseQRankSum=14.425;DP=524;FS=5.465;HRun=3;HaplotypeScore=72.6688;InbreedingCoeff=0.9200;MQ=68.48;MQ0=3;MQRankSum=-0.463;QD=24.53;ReadPosRankSum=2.692;VQSLOD=4.0929;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,26:27:66.15:722,66,0	0/0:15,0:15:42.12:0,42,579	0/0:28,0:16:33.93:0,34,386	0/0:23,0:12:26.25:0,26,258	0/0:23,0:23:69.20:0,69,953	1/1:0,28:28:63.18:718,63,0	1/1:3,10:13:32.97:336,33,0	1/1:1,25:25:71.85:667,72,0	1/1:1,12:13:24.07:275,24,0	0/0:28,0:28:75.20:0,75,997	0/0:25,0:25:72.21:0,72,982	1/1:0,17:17:30.08:336,30,0	1/1:1,10:11:21.06:236,21,0	1/1:0,13:13:21.06:243,21,0	0/0:13,0:13:39.13:0,39,560	0/0:10,0:10:30.09:0,30,415	0/0:14,0:14:39.11:0,39,541	0/0:24,0:24:69.16:0,69,923	0/0:24,0:24:66.17:0,66,878	1/1:1,28:29:71.77:791,72,0	1/1:3,2:5:11.98:112,12,0	1/1:2,10:12:28.22:266,28,0	1/1:0,13:13:35.97:391,36,0	1/1:0,7:7:18.05:208,18,0	1/1:1,20:21:49.38:539,49,0	1/1:5,19:24:31.01:541,31,0	1/1:0,20:20:48.13:539,48,0	0/1:4,14:18:17.50:364,0,17
chr10	20822787	.	T	TG	5160.38	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=17.106;DP=454;FS=2.037;HRun=0;HaplotypeScore=200.5288;InbreedingCoeff=0.9378;MQ=81.05;MQ0=0;MQRankSum=-16.328;QD=24.00;ReadPosRankSum=2.888;VQSLOD=4.7322;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,23:24:65.83:550,66,0	0/0:12,0:12:33.09:0,33,443	0/0:17,0:17:48.13:0,48,630	0/0:16,0:16:33.17:0,33,589	0/0:25,0:25:69.23:0,69,965	1/1:0,8:8:23.97:212,24,0	1/1:0,10:10:29.98:254,30,0	1/1:4,13:17:51.03:489,51,0	1/1:0,10:10:29.98:254,30,0	0/0:31,0:30:81.23:0,81,1092	0/0:16,0:16:36.10:0,36,498	1/1:1,10:11:32.97:296,33,0	1/1:1,11:12:35.97:321,36,0	1/1:0,20:20:59.92:500,60,0	0/0:24,0:24:72.24:0,72,1003	0/0:28,0:28:81.27:0,81,1130	0/0:35,0:35:99:0,105,1445	0/0:16,0:16:48.16:0,48,671	0/0:19,0:19:57.18:0,57,781	1/1:1,10:11:32.94:287,33,0	1/1:1,3:4:5.99:50,6,0	1/1:0,8:6:14.96:126,15,0	1/1:1,5:6:14.91:111,15,0	1/1:1,9:10:17.91:135,18,0	1/1:2,13:14:41.89:354,42,0	1/1:4,11:15:0.10:359,0,0	1/1:0,30:30:89.87:755,90,0	1/1:1,3:4:12:107,12,0
chr10	20822791	.	GTTTTTCT	G	11175.79	PASS	AB=0.545;AC=33;AF=0.589;AN=56;BaseQRankSum=17.371;DP=424;FS=1.618;HRun=0;HaplotypeScore=218.3320;InbreedingCoeff=0.9036;MQ=79.99;MQ0=0;MQRankSum=-16.963;QD=56.16;ReadPosRankSum=2.878;VQSLOD=4.4039;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,22:23:66.16:1255,66,0	0/0:11,0:11:30.10:0,30,1258	0/0:14,0:14:42.14:0,42,1586	0/0:16,0:16:43.20:0,43,1549	0/0:25,0:25:69.24:0,69,2797	1/1:1,7:8:24.08:453,24,0	1/1:0,10:10:30.10:604,30,0	1/1:1,13:14:42.14:885,42,0	1/1:0,10:10:30.10:605,30,0	0/0:26,0:25:69.24:0,69,2832	0/0:16,0:16:32.17:0,32,1234	1/1:0,10:10:30.10:601,30,0	1/1:0,11:11:33.11:661,33,0	1/1:0,20:20:60.21:1199,60,0	0/0:22,0:22:66.23:0,66,2771	0/0:27,0:27:81.28:0,81,3326	0/0:33,0:33:99:0,99,3942	0/0:17,0:17:51.16:0,51,1965	0/0:18,0:18:54.17:0,54,2167	1/1:0,10:10:30.10:592,30,0	1/1:0,3:3:9.03:154,9,0	1/1:1,7:6:14.54:239,15,0	1/1:0,5:5:15.05:286,15,0	1/1:0,9:9:18.06:344,18,0	1/1:0,13:12:36.12:706,36,0	0/1:2,10:12:99:595,0,144	1/1:0,30:30:90.31:1807,90,0	1/1:0,3:3:9.03:189,9,0
chr10	20822812	.	A	AAGCCTGCAGTC	35538.95	PASS	AB=0.750;AC=33;AF=0.589;AN=56;BaseQRankSum=15.284;DP=598;FS=0.000;HRun=0;HaplotypeScore=349.1928;InbreedingCoeff=0.8774;MQ=63.69;MQ0=0;MQRankSum=-16.529;QD=93.28;ReadPosRankSum=-2.332;VQSLOD=3.5511;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:29,14:44:94.15:4008,94,0	0/0:11,0:11:27.09:0,27,910	0/0:12,0:12:15.05:0,15,459	0/0:11,0:11:20.20:0,20,366	0/0:21,0:21:39.13:0,39,1187	1/1:5,8:14:39.13:2036,39,0	1/1:14,5:20:24.08:965,24,0	1/1:43,3:49:99:3976,106,0	1/1:9,8:17:48.16:2431,48,0	0/0:23,0:23:36.12:0,36,1191	0/0:11,0:11:14.64:0,15,396	1/1:12,13:26:57.20:2822,57,0	1/1:11,12:24:54.19:2633,54,0	1/1:18,10:29:57.20:2472,57,0	0/0:23,0:23:69.24:0,69,2223	0/0:30,0:30:81.24:0,81,2545	0/0:37,0:37:93.32:0,93,3022	0/0:17,0:17:42.04:0,42,1141	0/0:21,0:21:51.17:0,51,1524	1/1:8,5:14:18.06:887,18,0	1/1:5,6:12:2.24:589,2,0	1/1:6,5:10:15.05:831,15,0	1/1:6,3:9:9.03:387,9,0	1/1:11,5:17:24.08:1287,24,0	1/1:9,11:19:39.13:1993,39,0	0/1:18,7:27:31.87:2744,0,32	1/1:18,22:41:96.33:4846,96,0	1/1:3,1:6:12.04:632,12,0
chr10	20823717	.	T	TTGTGTGTGTGTG	13296.56	PASS	AB=0.783;AC=47;AF=0.870;AN=54;BaseQRankSum=-3.620;DP=723;FS=1.273;HRun=0;HaplotypeScore=273.6934;InbreedingCoeff=0.4370;MQ=55.13;MQ0=14;MQRankSum=-1.436;QD=20.91;ReadPosRankSum=-2.139;VQSLOD=3.5737;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:35,0:35:13.21:228,13,0	0/1:13,0:15:38.42:280,0,38	0/0:31,0:17:6.02:0,6,122	./.	1/1:19,10:32:5.19:266,5,0	1/1:27,0:27:17.62:741,18,0	1/1:21,7:28:5.72:227,6,0	1/1:20,0:20:24.97:596,25,0	1/1:33,0:34:8.59:365,9,0	1/1:30,0:32:67.03:1790,67,0	1/1:8,1:14:1.48:164,1,0	1/1:18,9:27:23.63:1294,24,0	1/1:17,5:23:11.06:521,11,0	1/1:23,9:34:14.30:731,14,0	0/0:7,0:21:20.60:0,21,582	1/1:12,0:20:6.49:205,6,0	1/1:11,0:17:12:401,12,0	1/1:13,0:13:9.47:209,9,0	1/1:22,0:22:19.05:441,19,0	1/1:16,1:31:11.92:528,12,0	1/1:37,0:42:7.66:278,8,0	1/1:26,0:26:4.61:250,5,0	0/1:11,4:16:0.39:0,0,1	0/1:27,7:37:0.43:1,0,0	1/1:13,9:24:5.16:312,5,0	1/1:24,0:32:51.17:1928,51,0	1/1:16,1:19:24.08:1082,24,0	1/1:5,3:10:9.03:457,9,0
chr10	20825085	.	G	GAAGCT	45055.09	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-7.904;DP=754;FS=20.668;HRun=0;HaplotypeScore=130.4310;InbreedingCoeff=0.9923;MQ=66.39;MQ0=0;MQRankSum=-8.660;QD=71.63;ReadPosRankSum=0.798;VQSLOD=4.6562;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,25:38:84.29:2494,84,0	1/1:1,10:11:30.10:920,30,0	0/0:18,0:17:38.72:0,39,707	0/0:26,0:26:57.18:0,57,1070	1/1:4,31:35:83.76:2306,84,0	1/1:9,9:19:45.15:1257,45,0	1/1:5,29:36:81.28:2421,81,0	1/1:14,15:34:90.25:2348,90,0	1/1:3,26:29:81.28:2454,81,0	1/1:11,27:42:99:3323,117,0	1/1:3,10:13:30.10:783,30,0	1/1:4,33:37:96.29:2866,96,0	1/1:7,26:34:87.26:2476,87,0	1/1:4,28:32:87.26:2579,87,0	1/1:10,39:50:99:3981,135,0	0/0:25,0:25:75.26:0,75,1523	0/0:29,0:29:81.26:0,81,1640	0/0:27,0:27:81.26:0,81,1641	1/1:6,10:17:45.09:1204,45,0	1/1:5,10:16:36.12:1052,36,0	1/1:4,27:33:63.04:1621,63,0	1/1:5,8:13:27.05:720,27,0	1/1:7,14:21:57.15:1586,57,0	1/1:3,31:34:84.29:2579,84,0	1/1:6,15:21:45.15:1355,45,0	1/1:6,26:34:87.27:2520,87,0	1/1:3,21:23:60.21:1842,60,0	1/1:0,6:6:12.04:369,12,0
chr10	20826003	.	TG	T	9068.56	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=6.955;DP=532;FS=0.470;HRun=8;HaplotypeScore=85.2690;InbreedingCoeff=0.9260;MQ=88.82;MQ0=0;MQRankSum=-2.418;QD=22.12;ReadPosRankSum=2.922;VQSLOD=5.2325;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,36:38:90.14:868,90,0	1/1:1,7:8:12.02:116,12,0	0/0:29,2:28:1.06:0,1,177	0/0:26,1:21:11.26:0,11,175	1/1:2,23:25:69.10:663,69,0	1/1:3,10:13:27.04:261,27,0	1/1:2,14:16:42.07:405,42,0	1/1:5,14:19:42.01:385,42,0	1/1:1,9:10:27.04:260,27,0	1/1:2,16:18:48.08:463,48,0	1/1:2,15:17:42.07:405,42,0	1/1:0,14:14:32.80:318,33,0	1/1:3,10:13:27.04:261,27,0	1/1:0,10:10:21.03:202,21,0	1/1:4,15:19:29.99:279,30,0	0/0:17,0:17:42.13:0,42,505	0/0:27,2:28:52.25:0,52,883	0/0:17,0:17:51.16:0,51,613	1/1:5,17:22:51.04:481,51,0	1/1:1,17:18:45.07:434,45,0	1/1:0,17:17:39.06:376,39,0	1/1:1,12:13:33.05:319,33,0	1/1:3,17:20:42.06:405,42,0	1/1:1,22:23:60.09:579,60,0	1/1:4,11:15:27.04:261,27,0	1/1:3,16:19:48.06:458,48,0	1/1:0,23:23:54.09:521,54,0	1/1:2,18:20:36.06:347,36,0
chr10	20826213	.	TG	T	7112.09	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=5.972;DP=489;FS=21.296;HRun=9;HaplotypeScore=76.5337;InbreedingCoeff=0.9592;MQ=73.24;MQ0=0;MQRankSum=-3.753;QD=17.65;ReadPosRankSum=2.400;VQSLOD=3.7680;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,26:29:60.03:549,60,0	1/1:0,0:3:6.11:18,6,0	0/0:18,0:18:38.71:0,39,371	0/0:16,0:13:15.04:0,15,163	1/1:1,0:14:23.24:76,23,0	1/1:2,17:19:42.02:384,42,0	1/1:1,14:15:39.01:357,39,0	1/1:1,16:17:45:406,45,0	1/1:4,11:15:16.22:282,16,0	1/1:4,0:22:36.66:108,37,0	1/1:2,0:9:12.22:36,12,0	1/1:1,15:16:36.02:329,36,0	1/1:2,14:16:33.02:302,33,0	1/1:1,20:21:50.98:466,51,0	1/1:3,0:22:30.55:90,31,0	0/0:8,0:8:24.07:0,24,276	0/0:27,2:29:25.50:0,26,689	0/0:14,0:14:36.08:0,36,395	1/1:1,0:12:18.80:55,19,0	1/1:0,12:12:36.02:328,36,0	1/1:4,29:33:81.03:741,81,0	1/1:3,9:12:26.96:237,27,0	1/1:4,12:16:23.97:220,24,0	1/1:2,24:26:54.03:494,54,0	1/1:5,18:23:53.90:475,54,0	1/1:2,16:18:48.02:439,48,0	1/1:2,23:25:57.02:521,57,0	1/1:0,7:8:23.05:198,23,0
chr10	20826526	.	A	AC	20995.92	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-2.425;DP=620;FS=11.631;HRun=1;HaplotypeScore=131.5893;InbreedingCoeff=0.9989;MQ=76.98;MQ0=1;MQRankSum=-5.747;QD=41.66;ReadPosRankSum=2.025;VQSLOD=2.8200;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,32:33:90.31:1436,90,0	1/1:1,8:9:21.07:336,21,0	0/0:27,0:27:75.53:0,76,920	0/0:18,0:18:39.08:0,39,479	1/1:0,21:21:45.15:719,45,0	1/1:0,12:12:33.11:527,33,0	1/1:2,16:18:45.15:719,45,0	1/1:1,36:37:99:1696,108,0	1/1:2,26:28:72.25:1149,72,0	1/1:2,21:22:62.01:943,62,0	1/1:1,17:18:39.13:623,39,0	1/1:0,28:28:72.25:1150,72,0	1/1:2,19:21:57.19:911,57,0	1/1:1,27:28:78.27:1243,78,0	1/1:3,17:20:51.17:814,51,0	0/0:21,0:21:63.21:0,63,880	0/0:26,0:26:78.26:0,78,1089	0/0:24,0:24:69.23:0,69,965	1/1:1,18:19:54.18:862,54,0	1/1:1,13:14:36.12:575,36,0	1/1:1,22:23:54.18:862,54,0	1/1:0,19:19:45.15:719,45,0	1/1:0,15:15:36.12:575,36,0	1/1:1,24:25:57.19:911,57,0	1/1:1,23:24:66.23:1053,66,0	1/1:1,24:25:75.25:1171,75,0	1/1:0,31:31:90.31:1429,90,0	1/1:0,12:12:36.12:575,36,0
chr10	20826576	.	A	AAGAAAG	22187.02	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=8.899;DP=467;FS=31.657;HRun=0;HaplotypeScore=146.0831;InbreedingCoeff=0.9861;MQ=58.91;MQ0=3;MQRankSum=-6.481;QD=70.21;ReadPosRankSum=2.540;VQSLOD=3.4474;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,5:16:39.06:1023,39,0	1/1:7,0:7:21.05:473,21,0	0/0:32,0:20:20.57:0,21,610	0/0:52,0:29:13.56:0,14,827	1/1:11,0:11:33.11:946,33,0	1/1:5,2:7:21.07:461,21,0	1/1:10,2:12:33.06:738,33,0	1/1:19,0:18:48.12:1082,48,0	1/1:8,9:17:45.15:1309,45,0	1/1:18,0:18:51.17:1278,51,0	1/1:10,0:10:29.97:816,30,0	1/1:10,5:15:45.09:1055,45,0	1/1:7,6:13:39.09:937,39,0	1/1:11,11:22:66.08:1760,66,0	1/1:16,0:16:48.12:1335,48,0	0/0:21,0:21:63.21:0,63,1314	0/0:20,0:20:53.75:0,54,967	0/0:25,0:25:36.32:0,36,1214	1/1:14,0:14:33.11:762,33,0	1/1:8,4:13:30.10:814,30,0	1/1:6,2:8:20.98:354,21,0	1/1:6,6:12:33.10:904,33,0	1/1:5,4:9:27.08:614,27,0	1/1:7,5:12:30.01:579,30,0	1/1:10,6:15:45.15:1241,45,0	1/1:8,8:16:45.15:1431,45,0	1/1:15,10:26:72.15:1849,72,0	1/1:1,4:5:14.72:425,15,0
chr10	20826578	.	G	GAA	13390.42	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=11.537;DP=463;FS=36.309;HRun=3;HaplotypeScore=153.7606;InbreedingCoeff=0.9876;MQ=58.85;MQ0=3;MQRankSum=-6.974;QD=43.33;ReadPosRankSum=1.343;VQSLOD=2.2253;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,6:15:39.05:619,39,0	1/1:5,3:8:21.05:330,21,0	0/0:33,0:19:23.56:0,24,542	0/0:52,0:29:37.84:0,38,646	1/1:1,10:11:33.11:609,33,0	1/1:5,2:7:21.05:299,21,0	1/1:7,5:12:33.04:480,33,0	1/1:2,16:17:48.05:704,48,0	1/1:12,4:16:45.11:690,45,0	1/1:5,12:17:51.16:910,51,0	1/1:2,8:10:29.97:524,30,0	1/1:11,4:15:45.08:654,45,0	1/1:11,2:13:39.09:526,39,0	1/1:16,6:22:66.08:1022,66,0	1/1:2,14:16:48.12:857,48,0	0/0:21,0:21:63.21:0,63,960	0/0:23,0:23:47.63:0,48,759	0/0:25,0:25:56.56:0,57,914	1/1:6,6:12:14.11:460,14,0	1/1:9,4:13:30.09:491,30,0	1/1:7,1:8:20.98:281,21,0	1/1:8,3:11:33.09:520,33,0	1/1:7,2:9:27.07:396,27,0	1/1:10,2:12:29.99:388,30,0	1/1:11,5:15:45.14:732,45,0	1/1:10,6:16:45.14:676,45,0	1/1:18,7:25:72.11:1003,72,0	1/1:6,0:5:15.05:219,15,0
chr10	20826607	.	A	AC	244.71	PASS	AB=0.828;AC=10;AF=0.200;AN=50;BaseQRankSum=3.540;DP=343;FS=7.100;HRun=0;HaplotypeScore=139.3745;InbreedingCoeff=-0.0126;MQ=60.20;MQ0=11;MQRankSum=-1.346;QD=3.60;ReadPosRankSum=-0.198;VQSLOD=2.9977;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:8,2:9:61.79:62,0,70	0/0:4,0:4:12.04:0,12,166	0/0:33,0:13:25.42:0,25,356	0/0:50,0:19:39.08:0,39,428	0/0:14,0:14:21.07:0,21,284	./.	0/1:3,2:4:12.41:29,0,12	./.	0/0:9,0:9:12.04:0,12,168	0/0:24,0:23:59.40:0,59,786	0/0:9,0:9:15.05:0,15,204	0/1:6,1:7:15.64:16,0,103	0/0:7,0:7:12.04:0,12,167	0/0:11,0:11:12.04:0,12,173	0/0:16,0:16:35.55:0,36,435	0/0:27,0:25:72.24:0,72,1008	0/0:16,0:16:30.57:0,31,413	0/0:24,0:22:66.22:0,66,910	0/0:7,0:7:20.73:0,21,250	0/0:6,0:5:1.25:0,1,3	1/1:3,3:6:8.77:64,9,0	0/1:5,1:6:18.62:19,0,113	0/1:5,1:6:36.51:38,0,37	./.	0/0:7,0:7:6.02:0,6,84	0/1:7,4:11:99:128,0,168	0/1:11,1:12:7.95:8,0,304	0/1:4,1:5:19.84:20,0,92
chr10	20826624	.	GAA	G	744	PASS	AB=0.952;AC=28;AF=0.519;AN=54;BaseQRankSum=5.113;DP=313;FS=0.000;HRun=3;HaplotypeScore=111.9854;InbreedingCoeff=0.3607;MQ=45.26;MQ0=16;MQRankSum=-2.648;QD=4.77;ReadPosRankSum=0.906;VQSLOD=-0.2593;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,1:6:4.55:41,5,0	1/1:4,0:4:0.41:1,0,0	0/0:14,0:2:5.99:0,6,51	0/0:26,0:11:11.65:0,12,94	0/0:11,0:11:1.13:0,1,3	0/0:4,0:2:1.25:0,1,3	1/1:7,1:7:8.95:89,9,0	0/0:18,0:15:5.78:0,6,32	0/1:5,0:5:0.04:0,0,0	1/1:32,0:31:14.62:210,15,0	0/1:6,0:6:0.07:0,0,0	1/1:6,1:7:2.82:36,3,0	0/0:10,0:10:1.11:0,1,3	0/1:6,0:6:2.43:25,0,2	0/1:16,1:16:13.31:25,0,13	0/0:27,0:25:2.39:0,2,293	0/0:12,0:12:16.81:0,17,179	0/0:26,0:24:57.36:0,57,457	1/1:10,0:9:7.18:45,7,0	./.	0/1:9,1:10:20.88:21,0,33	0/1:5,1:6:4.41:21,0,4	1/1:3,1:4:3:37,3,0	0/0:7,0:7:0.24:0,0,1	1/1:10,0:9:2.97:32,3,0	1/1:3,4:7:11.96:130,12,0	1/1:13,1:14:14.62:136,15,0	1/1:2,1:1:3.01:44,3,0
chr10	20826626	.	AAG	A	534.17	PASS	AB=1.000;AC=27;AF=0.587;AN=46;BaseQRankSum=-0.545;DP=327;FS=15.589;HRun=0;HaplotypeScore=114.7361;InbreedingCoeff=0.2170;MQ=45.05;MQ0=16;MQRankSum=0.755;QD=2.70;ReadPosRankSum=1.813;VQSLOD=1.6135;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:10,0:8:2.96:19,3,0	0/0:4,0:4:2.94:0,3,18	./.	./.	0/1:12,0:12:0.01:0,0,0	./.	1/1:8,0:7:8.13:36,8,0	0/0:19,0:16:2.92:0,3,17	0/1:6,0:6:0:0,0,0	0/0:34,0:33:31.57:0,32,250	./.	1/1:8,0:7:3.41:19,3,0	0/1:11,0:11:0:1,0,0	0/1:5,0:6:7.77:8,0,8	0/1:16,0:15:12.28:12,0,27	1/1:19,9:26:14.97:316,15,0	0/1:14,0:14:6.90:7,0,36	0/1:26,0:24:0.80:87,0,1	0/0:13,0:12:2.92:0,3,17	./.	0/0:11,0:11:3.88:0,4,32	0/1:6,0:6:4.94:5,0,17	1/1:4,0:4:2.96:19,3,0	0/1:8,0:8:0.06:0,0,0	1/1:11,0:10:2.84:14,3,0	1/1:7,0:7:11.01:50,11,0	1/1:14,0:14:0:41,0,0	1/1:3,0:1:2.99:24,3,0
chr10	20826670	.	GAAAGAGAAAGAGAGAA	G	10723.52	PASS	AB=0.895;AC=43;AF=0.796;AN=54;BaseQRankSum=7.114;DP=447;FS=0.000;HRun=0;HaplotypeScore=200.5862;InbreedingCoeff=0.7733;MQ=45.47;MQ0=11;MQRankSum=-7.091;QD=31.63;ReadPosRankSum=-0.726;VQSLOD=3.9203;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:18,2:20:33.58:793,34,0	1/1:11,0:11:9.55:330,10,0	0/0:14,0:10:26.34:0,26,504	0/0:12,0:8:21.53:0,22,427	1/1:19,0:19:20.18:486,20,0	1/1:12,0:10:24.03:515,24,0	1/1:14,0:13:29.65:465,30,0	1/1:9,0:7:15.05:304,15,0	1/1:0,20:20:12.04:457,12,0	1/1:27,0:27:10.68:508,11,0	./.	1/1:11,2:13:36.04:856,36,0	1/1:1,20:21:12.51:456,13,0	1/1:12,1:13:35.95:648,36,0	1/1:11,0:12:4.28:87,4,0	0/0:21,0:21:42.22:0,42,1894	0/0:25,0:25:47.89:0,48,1294	0/0:28,0:28:55.09:0,55,2261	1/1:6,0:6:11.97:172,12,0	1/1:19,0:17:3.01:54,3,0	0/1:15,2:17:4.55:82,0,5	1/1:12,2:12:32.96:667,33,0	1/1:14,2:14:32.14:746,32,0	1/1:4,11:15:4.78:122,5,0	1/1:2,13:14:17.98:545,18,0	1/1:15,2:17:46.50:851,46,0	1/1:16,7:22:59.21:1433,59,0	1/1:5,0:4:8.96:148,9,0
chr10	20826684	.	GAA	G	3171.23	PASS	AB=0.909;AC=43;AF=0.796;AN=54;BaseQRankSum=10.849;DP=446;FS=0.498;HRun=3;HaplotypeScore=139.5786;InbreedingCoeff=0.7814;MQ=58.29;MQ0=7;MQRankSum=-6.618;QD=9.94;ReadPosRankSum=2.867;VQSLOD=0.5333;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:20:38.50:266,39,0	1/1:10,0:10:20.51:158,21,0	0/0:22,0:17:44.50:0,44,731	0/0:20,0:16:46.47:0,46,669	1/1:15,0:15:25.97:206,26,0	1/1:12,0:10:23.67:158,24,0	1/1:13,0:12:20.69:139,21,0	1/1:20,0:18:15.41:212,15,0	1/1:20,0:20:11.79:74,12,0	1/1:14,2:16:24.01:234,24,0	./.	1/1:14,0:14:32.87:207,33,0	1/1:20,0:20:11.64:69,12,0	1/1:14,0:14:37.22:219,37,0	0/1:9,1:10:4.95:73,0,5	0/0:20,0:19:47.98:0,48,736	0/0:31,0:31:51.12:0,51,1117	0/0:25,0:24:54.21:0,54,1220	1/1:9,0:9:18.25:125,18,0	1/1:1,19:19:2.94:18,3,0	1/1:8,0:8:6.23:27,6,0	1/1:15,0:13:30.38:202,30,0	1/1:18,0:17:26.54:174,27,0	1/1:12,0:12:2.92:17,3,0	1/1:13,0:13:14.71:90,15,0	1/1:13,0:13:35.06:240,35,0	1/1:24,0:23:60.52:399,61,0	1/1:3,0:3:5.95:43,6,0
chr10	20827579	.	TA	T	8868.49	PASS	AB=1.000;AC=47;AF=0.839;AN=56;BaseQRankSum=8.105;DP=292;FS=14.986;HRun=1;HaplotypeScore=42.6475;InbreedingCoeff=0.7466;MQ=66.57;MQ0=0;MQRankSum=0.126;QD=36.20;ReadPosRankSum=3.178;VQSLOD=3.2130;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,11:12:13.28:397,13,0	1/1:0,13:13:36.12:502,36,0	0/1:5,0:4:0.97:1,0,39	0/0:4,0:3:5.34:0,5,29	1/1:0,22:22:63.13:830,63,0	1/1:0,5:5:15.05:208,15,0	1/1:0,5:5:6.02:83,6,0	1/1:0,16:16:48.13:621,48,0	1/1:0,5:5:12.04:166,12,0	1/1:0,11:11:33.11:460,33,0	1/1:0,18:18:45.04:558,45,0	1/1:0,2:2:6.02:83,6,0	1/1:0,8:8:24.08:327,24,0	1/1:0,8:8:24.08:333,24,0	1/1:0,5:5:9.03:125,9,0	0/0:12,0:12:36.08:0,36,487	0/0:11,0:11:33.08:0,33,443	0/0:20,0:20:60.15:0,60,836	1/1:1,8:9:13.38:287,13,0	1/1:0,22:22:66.11:854,66,0	1/1:0,1:1:3.01:42,3,0	1/1:0,1:1:3.01:42,3,0	1/1:0,10:10:30.10:419,30,0	1/1:0,6:6:15.05:209,15,0	1/1:0,13:13:33.11:458,33,0	1/1:0,14:14:39.12:527,39,0	1/1:0,22:22:63.21:877,63,0	1/1:0,12:12:33.11:460,33,0
chr10	20827886	.	CA	C	1709.32	PASS	AB=0.981;AC=43;AF=0.768;AN=56;BaseQRankSum=4.865;DP=335;FS=4.405;HRun=1;HaplotypeScore=81.2648;InbreedingCoeff=-0.0702;MQ=92.95;MQ0=0;MQRankSum=-4.192;QD=5.50;ReadPosRankSum=9.077;VQSLOD=0.1179;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:27,1:28:34.55:181,35,0	1/1:4,0:4:9.65:37,10,0	0/0:20,4:24:7.58:0,8,349	0/1:15,2:18:1.11:1,0,111	1/1:9,1:10:12.66:70,13,0	0/1:8,0:8:28.72:30,0,29	0/1:13,0:13:16.12:78,0,16	0/1:19,0:19:43.45:45,0,43	1/1:12,0:12:26.78:101,27,0	1/1:3,1:4:8.10:41,8,0	1/1:5,0:5:7.24:28,7,0	0/1:7,0:7:0.63:69,0,1	0/1:14,2:16:20.14:129,0,20	1/1:11,0:11:0.54:65,1,0	0/1:12,0:12:16.79:65,0,17	1/1:25,0:25:9.43:155,9,0	1/1:22,0:22:2.78:105,3,0	0/1:8,0:8:1.20:55,0,1	0/1:10,0:10:14.17:14,0,103	1/1:14,0:14:28.22:120,28,0	0/1:9,0:9:4.07:44,0,4	1/1:11,0:11:19.65:83,20,0	1/1:5,1:6:10.87:68,11,0	1/1:8,0:8:18.19:61,18,0	1/1:7,0:7:13.94:51,14,0	0/1:11,0:11:23.56:42,0,24	1/1:10,0:10:19.05:94,19,0	1/1:3,0:3:6.96:24,7,0
chr10	20828082	.	G	GTTT	9976.93	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=4.685;DP=537;FS=11.246;HRun=9;HaplotypeScore=93.4725;InbreedingCoeff=0.9913;MQ=79.31;MQ0=2;MQRankSum=-3.734;QD=22.57;ReadPosRankSum=0.299;VQSLOD=1.9815;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,3:37:65.81:614,66,0	1/1:1,11:13:36.12:694,36,0	0/0:16,0:17:24.75:0,25,269	0/0:20,0:19:13.18:0,13,237	1/1:3,15:18:39.09:661,39,0	1/1:2,0:12:22.17:163,22,0	1/1:2,0:20:49.06:370,49,0	1/1:6,0:34:80.77:673,81,0	1/1:3,3:21:56.84:543,57,0	1/1:2,16:20:48.15:848,48,0	1/1:1,14:15:42.10:742,42,0	1/1:0,0:10:29.89:230,30,0	1/1:0,0:15:23.91:184,24,0	1/1:5,0:19:34.14:271,34,0	1/1:1,0:20:24.17:69,24,0	0/0:21,0:21:57.14:0,57,720	0/0:22,0:24:66.12:0,66,800	0/0:13,0:13:33.06:0,33,417	1/1:8,15:24:51.16:924,51,0	1/1:5,0:22:46.03:355,46,0	1/1:5,0:26:43.89:394,44,0	1/1:2,0:19:43.08:328,43,0	1/1:2,1:16:35.88:312,36,0	1/1:1,0:17:44.83:344,45,0	1/1:1,0:12:23.91:184,24,0	1/1:2,0:24:65.80:550,66,0	1/1:3,0:14:32.86:250,33,0	1/1:0,0:11:32.90:275,33,0
chr10	20829038	.	A	AAAC	8254.29	PASS	AB=0.611;AC=33;AF=0.589;AN=56;BaseQRankSum=-2.820;DP=369;FS=193.229;HRun=0;HaplotypeScore=70.8884;InbreedingCoeff=-0.0121;MQ=60.09;MQ0=1;MQRankSum=-8.341;QD=29.06;ReadPosRankSum=3.183;VQSLOD=1.1731;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,11:15:7.28:409,7,0	1/1:1,1:6:1.42:143,1,0	0/0:17,0:11:23.60:0,24,285	0/0:10,0:8:20.94:0,21,219	0/1:9,1:22:87.78:478,0,88	1/1:0,7:7:21.07:412,21,0	0/1:4,7:11:50.11:267,0,50	0/1:7,17:24:40.55:772,0,41	1/1:1,3:5:9.02:176,9,0	0/1:5,0:24:34.63:475,0,35	0/1:4,1:16:99:453,0,100	1/1:1,4:5:6.02:118,6,0	1/1:1,7:8:1.38:333,1,0	1/1:2,3:6:12:235,12,0	0/1:1,3:4:7.90:164,0,8	0/0:15,0:15:42.09:0,42,565	0/0:29,0:29:81.24:0,81,1184	0/0:14,0:14:38.94:0,39,545	1/1:2,0:10:6.11:279,6,0	0/1:5,10:16:22.96:507,0,23	0/1:6,4:10:44.40:44,0,53	0/1:1,4:5:1.26:164,0,1	0/1:3,18:21:12.84:728,0,13	0/1:5,2:8:11.09:11,0,17	0/1:10,9:19:99:311,0,127	1/1:0,11:14:36.11:649,36,0	1/1:1,14:14:22.20:746,22,0	0/1:4,7:11:51.51:380,0,52
chr10	20830088	.	AT	A	19693.85	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=9.304;DP=672;FS=1.688;HRun=2;HaplotypeScore=68.0780;InbreedingCoeff=0.9981;MQ=85.98;MQ0=0;MQRankSum=-6.346;QD=35.42;ReadPosRankSum=2.570;VQSLOD=5.4196;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,43:43:99:1636,126,0	1/1:0,8:8:18.06:234,18,0	0/0:23,0:23:62.21:0,62,846	0/0:23,0:23:69.23:0,69,997	1/1:3,30:33:75.23:960,75,0	1/1:1,23:24:60.19:779,60,0	1/1:0,25:25:66.21:857,66,0	1/1:1,34:35:99:1291,102,0	1/1:0,33:33:93.30:1208,93,0	1/1:0,23:23:69.21:881,69,0	1/1:1,16:17:48.16:623,48,0	1/1:1,21:22:60.19:779,60,0	1/1:0,24:24:63.20:818,63,0	1/1:0,20:20:48.16:623,48,0	1/1:0,30:30:81.26:1052,81,0	0/0:25,0:25:75.24:0,75,1104	0/0:24,0:24:72.24:0,72,1079	0/0:21,0:21:63.21:0,63,942	1/1:0,21:21:63.18:790,63,0	1/1:1,24:25:63.20:818,63,0	1/1:1,26:27:78.25:1013,78,0	1/1:0,19:19:51.17:662,51,0	1/1:0,16:16:45.15:584,45,0	1/1:0,27:27:81.26:1051,81,0	1/1:1,20:21:54.18:701,54,0	1/1:0,28:28:84.27:1091,84,0	1/1:0,21:21:54.18:701,54,0	1/1:0,14:14:42.14:545,42,0
chr10	20830232	.	AACACACACACAC	A	1482.53	PASS	AB=0.926;AC=29;AF=0.659;AN=44;BaseQRankSum=3.206;DP=428;FS=1.025;HRun=0;HaplotypeScore=167.7155;InbreedingCoeff=0.1867;MQ=65.64;MQ0=19;MQRankSum=-1.701;QD=5.33;ReadPosRankSum=1.730;VQSLOD=2.6998;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:14,1:14:0.47:1,0,0	0/0:7,0:7:1.55:0,2,4	./.	./.	./.	1/1:8,4:12:3.01:102,3,0	1/1:18,0:18:2.74:25,3,0	./.	0/1:15,0:15:19.84:20,0,135	0/0:10,0:9:9.49:0,9,112	0/1:10,1:11:62.34:62,0,109	1/1:12,2:15:3.16:181,3,0	0/1:11,0:11:3.03:19,0,3	1/1:12,0:14:6.02:167,6,0	1/1:17,0:19:11.91:316,12,0	0/0:5,0:5:6.02:0,6,300	0/0:25,0:25:33.11:0,33,1480	0/0:14,0:14:12.04:0,12,339	0/1:11,1:12:35.40:96,0,35	./.	1/1:40,0:35:8.61:88,9,0	1/1:13,0:13:2.84:8,3,0	./.	0/1:19,7:26:42.69:84,0,43	1/1:15,1:17:6.02:147,6,0	1/1:12,0:12:1.81:37,2,0	1/1:13,2:16:1.03:141,1,0	1/1:8,0:11:6.21:125,6,0
chr10	20831339	.	CT	C	17547.33	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=12.963;DP=794;FS=1.522;HRun=2;HaplotypeScore=119.1396;InbreedingCoeff=0.9931;MQ=87.30;MQ0=0;MQRankSum=-3.607;QD=35.74;ReadPosRankSum=3.353;VQSLOD=4.5685;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,53:55:99:2026,157,0	0/0:17,0:17:51.17:0,51,756	0/0:35,0:35:99:0,102,1392	0/0:22,0:22:10.17:0,10,659	0/0:28,0:28:84.26:0,84,1210	1/1:0,19:19:57.19:740,57,0	1/1:2,32:34:84.27:1091,84,0	1/1:2,33:35:99:1243,99,0	1/1:2,27:29:81.26:1052,81,0	0/0:29,0:29:84.75:0,85,1244	0/0:22,0:22:57.19:0,57,854	1/1:0,33:33:90.29:1169,90,0	1/1:1,30:31:81.12:1052,81,0	1/1:0,31:31:84.27:1091,84,0	0/0:26,0:26:72.24:0,72,1078	0/0:37,0:37:99:0,111,1646	0/0:33,0:33:99:0,99,1481	0/0:30,0:30:90.28:0,90,1324	0/0:24,0:24:69.23:0,69,1033	1/1:0,36:36:99:1363,105,0	1/1:1,30:31:84.27:1091,84,0	1/1:0,15:15:42.14:545,42,0	1/1:0,24:24:62.61:817,63,0	1/1:0,29:29:78.25:1013,78,0	1/1:0,20:20:57.19:739,57,0	1/1:0,30:30:90.28:1154,90,0	1/1:0,29:29:81.26:1052,81,0	1/1:0,10:10:24.08:311,24,0
chr10	20832461	.	AT	A	946.03	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=8.961;DP=673;FS=5.234;HRun=7;HaplotypeScore=66.1008;InbreedingCoeff=0.8540;MQ=77.96;MQ0=0;MQRankSum=-3.078;QD=26.28;ReadPosRankSum=1.799;VQSLOD=4.5659;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:90.24:0,90,1090	0/0:9,0:9:27.09:0,27,340	0/0:15,0:15:33.09:0,33,388	0/0:12,1:13:8.56:0,9,288	0/0:32,0:32:90.24:0,90,1083	0/0:21,0:21:51.16:0,51,641	0/0:37,0:37:96.29:0,96,1193	0/0:33,0:33:78.23:0,78,959	0/0:27,0:27:72.23:0,72,906	0/0:25,0:25:66.21:0,66,830	0/0:16,0:16:42.13:0,42,528	0/0:32,0:32:84.27:0,84,1057	0/0:22,0:22:66.18:0,66,811	0/0:27,0:27:72.21:0,72,892	1/1:1,35:36:99:1041,102,0	0/0:23,0:23:69.22:0,69,868	0/0:33,0:33:93.27:0,93,1143	0/0:27,0:27:72.19:0,72,876	0/0:20,0:20:45.14:0,45,566	0/0:16,0:16:33.09:0,33,402	0/0:42,0:42:99:0,111,1396	0/0:28,0:28:78.20:0,78,951	0/0:15,0:15:42.13:0,42,526	0/0:23,0:23:63.15:0,63,739	0/0:20,0:20:57.18:0,57,717	0/0:26,0:26:72.21:0,72,881	0/0:17,0:17:51.16:0,51,640	0/0:2,0:2:6.02:0,6,75
chr10	20834342	.	AGTAAGT	A	26128.64	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=12.641;DP=656;FS=5.022;HRun=0;HaplotypeScore=171.2599;InbreedingCoeff=0.9967;MQ=78.39;MQ0=0;MQRankSum=-15.470;QD=50.34;ReadPosRankSum=1.657;VQSLOD=4.9255;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,43:43:93.25:1942,93,0	1/1:0,7:7:21.07:516,21,0	0/0:26,0:26:76.81:0,77,2407	0/0:24,0:24:39.67:0,40,1343	1/1:2,14:16:42.01:840,42,0	1/1:0,22:22:45.15:1069,45,0	1/1:1,19:20:44.89:1034,45,0	1/1:3,28:31:84.23:1885,84,0	1/1:1,26:27:60.20:1352,60,0	1/1:1,19:20:48.11:1036,48,0	1/1:2,11:13:32.78:645,33,0	1/1:0,19:19:44.96:1015,45,0	1/1:1,20:21:45.15:1067,45,0	1/1:2,23:25:60.20:1360,60,0	1/1:0,29:29:78.13:1713,78,0	0/0:36,0:36:99:0,108,3611	0/0:37,0:37:99:0,111,3821	0/0:14,0:14:42.11:0,42,1425	1/1:1,24:25:72.18:1656,72,0	1/1:1,22:23:54.08:1112,54,0	1/1:2,33:35:41.40:789,41,0	1/1:0,24:24:48.16:958,48,0	1/1:0,14:13:27.09:551,27,0	1/1:1,19:20:29.85:608,30,0	1/1:1,20:21:54.11:1089,54,0	1/1:0,35:35:99:2269,102,0	1/1:0,22:22:54.05:1180,54,0	1/1:0,6:6:18.06:442,18,0
chr10	20834450	.	G	GA	23315.29	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-4.036;DP=794;FS=19.800;HRun=3;HaplotypeScore=105.8734;InbreedingCoeff=0.9999;MQ=78.84;MQ0=0;MQRankSum=-8.182;QD=35.06;ReadPosRankSum=2.458;VQSLOD=3.0101;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,56:57:99:1889,135,0	1/1:1,16:17:48.16:672,48,0	0/0:27,0:27:62.96:0,63,679	0/0:18,0:18:47.97:0,48,511	1/1:0,26:26:69.10:899,69,0	1/1:1,19:20:51.17:709,51,0	1/1:0,31:31:84.28:1175,84,0	1/1:2,37:39:99:1484,108,0	1/1:1,23:24:69.23:966,69,0	1/1:0,28:28:84.28:1176,84,0	1/1:2,21:23:60.20:840,60,0	1/1:3,22:25:57.19:793,57,0	1/1:2,29:31:81.27:1133,81,0	1/1:0,28:28:78.22:1069,78,0	1/1:6,25:31:72.24:994,72,0	0/0:38,0:38:99:0,108,1274	0/0:26,0:26:78.22:0,78,923	0/0:20,0:20:54.16:0,54,648	1/1:6,23:29:67.58:926,68,0	1/1:3,28:31:75.25:1050,75,0	1/1:1,25:26:54.18:756,54,0	1/1:2,22:24:57.10:754,57,0	1/1:2,25:27:63.21:882,63,0	1/1:3,31:34:84.28:1176,84,0	1/1:2,34:35:75.25:1049,75,0	1/1:0,32:32:90.29:1243,90,0	1/1:2,31:33:87.29:1217,87,0	1/1:2,11:13:33.11:462,33,0
chr10	20834640	.	T	TGGGGAAG	33413.45	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-10.542;DP=619;FS=0.805;HRun=0;HaplotypeScore=116.2352;InbreedingCoeff=0.9401;MQ=74.28;MQ0=0;MQRankSum=-14.782;QD=69.90;ReadPosRankSum=0.233;VQSLOD=5.1973;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,17:24:45.15:1673,45,0	1/1:1,3:4:3.01:118,3,0	0/0:25,0:24:53.64:0,54,946	0/0:30,0:29:60.86:0,61,1561	1/1:1,12:15:24.01:757,24,0	1/1:5,22:30:54.18:2091,54,0	1/1:3,18:27:42.61:1607,43,0	1/1:1,24:29:81.24:2812,81,0	1/1:1,25:33:57.20:2239,57,0	1/1:4,18:30:63.62:2005,64,0	1/1:3,8:13:27.05:838,27,0	1/1:3,16:22:32.95:1270,33,0	1/1:1,19:25:47.83:1884,48,0	1/1:1,15:18:30.10:1174,30,0	1/1:2,31:39:69.24:2703,69,0	0/0:30,0:30:84.29:0,84,2119	0/0:37,0:37:99:0,111,2633	0/0:19,0:19:51.18:0,51,1287	1/1:1,17:24:71:2410,71,0	1/1:1,9:12:21.07:734,21,0	1/1:2,5:11:15.05:572,15,0	1/1:5,12:18:27.09:1014,27,0	1/1:1,11:13:24.08:866,24,0	1/1:1,10:16:18.06:635,18,0	1/1:0,14:17:33.11:1270,33,0	1/1:2,21:27:63.20:2264,63,0	1/1:1,22:26:53.73:2123,54,0	1/1:0,3:4:9.03:354,9,0
chr10	20834915	.	A	AAAT	15928.38	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=7.924;DP=516;FS=4.774;HRun=0;HaplotypeScore=115.0033;InbreedingCoeff=0.9415;MQ=63.43;MQ0=0;MQRankSum=-6.352;QD=36.37;ReadPosRankSum=-0.084;VQSLOD=5.6815;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,35:36:78.20:1502,78,0	1/1:0,0:6:17.99:154,18,0	0/0:8,0:6:8.22:0,8,180	0/0:12,0:12:25.69:0,26,374	1/1:1,0:22:62.68:496,63,0	1/1:4,17:21:45.04:841,45,0	1/1:1,18:19:45.15:901,45,0	1/1:2,18:21:54.14:931,54,0	1/1:2,25:29:66.14:1257,66,0	1/1:1,0:17:38.94:327,39,0	1/1:1,0:13:32.91:266,33,0	1/1:0,17:17:36.12:742,36,0	1/1:2,18:20:45.10:875,45,0	1/1:2,26:29:48.16:939,48,0	1/1:2,0:22:57.14:784,57,0	0/0:20,0:20:57.19:0,57,861	0/0:19,0:19:54.13:0,54,759	0/0:19,0:19:51.14:0,51,701	1/1:5,0:19:43.30:371,43,0	1/1:8,11:19:47.92:674,48,0	1/1:3,14:17:30.03:550,30,0	1/1:2,10:12:27.41:379,27,0	1/1:3,10:13:27.05:486,27,0	1/1:3,16:19:39.12:801,39,0	1/1:4,23:28:59.76:834,60,0	1/1:4,19:23:65.99:1074,66,0	1/1:2,12:14:36.08:681,36,0	1/1:0,1:1:3.01:62,3,0
chr10	20835001	.	G	GGGCAGAGGCAGA	8586.56	PASS	AB=1.000;AC=44;AF=0.815;AN=54;BaseQRankSum=-0.680;DP=439;FS=5.298;HRun=0;HaplotypeScore=156.5839;InbreedingCoeff=0.5121;MQ=59.74;MQ0=8;MQRankSum=-2.477;QD=22.72;ReadPosRankSum=-2.511;VQSLOD=2.7824;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:27,1:27:23.85:411,24,0	1/1:6,0:6:5.99:48,6,0	0/1:22,0:11:25.07:25,0,169	0/1:22,0:17:14.80:15,0,246	1/1:11,0:11:3:25,3,0	1/1:11,2:13:18.03:645,18,0	1/1:29,0:28:30.08:576,30,0	1/1:22,0:21:15.04:238,15,0	1/1:14,4:17:21.06:855,21,0	1/1:15,0:14:21.05:350,21,0	./.	1/1:15,1:16:33.10:857,33,0	1/1:8,4:15:5.26:345,5,0	1/1:26,1:27:42.06:1005,42,0	1/1:3,0:9:9.03:110,9,0	0/0:8,0:8:18.06:0,18,577	0/0:25,0:25:60.11:0,60,1681	0/0:17,0:17:33.09:0,33,833	1/1:16,0:13:15.04:294,15,0	0/0:8,0:7:0.47:0,0,1	1/1:25,0:23:21.06:362,21,0	1/1:5,1:6:3.01:176,3,0	1/1:12,0:12:9:99,9,0	1/1:19,1:20:27.02:561,27,0	1/1:12,0:12:8.96:84,9,0	1/1:16,1:17:31.90:802,32,0	1/1:3,4:11:9.03:529,9,0	1/1:2,4:6:3.01:176,3,0
chr10	20835768	.	CA	C	3571.66	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=4.820;DP=734;FS=0.879;HRun=2;HaplotypeScore=83.8218;InbreedingCoeff=0.9993;MQ=90.56;MQ0=0;MQRankSum=-1.063;QD=40.59;ReadPosRankSum=2.416;VQSLOD=3.8780;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,147,2278	1/1:0,8:8:24.08:335,24,0	0/0:35,0:35:81.27:0,81,1421	0/0:26,0:26:65.42:0,65,1029	1/1:0,19:19:57.19:794,57,0	0/0:26,0:26:75.24:0,75,1171	0/0:37,0:37:99:0,111,1772	0/0:38,0:38:99:0,114,1740	0/0:31,0:31:93.27:0,93,1452	1/1:1,24:25:75.25:1039,75,0	1/1:0,16:16:42.14:586,42,0	0/0:22,0:22:66.23:0,66,1053	0/0:28,0:28:84.26:0,84,1297	0/0:22,0:22:66.20:0,66,1029	0/0:28,0:28:84.29:0,84,1342	0/0:26,0:26:78.23:0,78,1199	0/0:38,0:38:99:0,114,1792	0/0:14,0:14:39.11:0,39,599	1/1:0,20:20:60.19:817,60,0	0/0:18,0:18:54.17:0,54,830	0/0:29,0:29:84.26:0,84,1297	0/0:21,0:21:60.19:0,60,928	0/0:33,0:33:87.28:0,87,1348	0/0:29,0:29:87.25:0,87,1356	0/0:27,0:27:78.25:0,78,1206	0/0:37,1:38:72.44:0,72,1686	0/0:21,0:21:63.20:0,63,984	0/0:9,0:9:27.09:0,27,424
chr10	20836512	.	T	TACACACACAC	14501.22	PASS	AB=0.703;AC=46;AF=0.852;AN=54;BaseQRankSum=7.354;DP=695;FS=0.000;HRun=0;HaplotypeScore=267.6971;InbreedingCoeff=0.5905;MQ=66.53;MQ0=3;MQRankSum=-7.752;QD=26.18;ReadPosRankSum=0.179;VQSLOD=3.3062;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,0:25:4.90:94,5,0	1/1:11,0:12:21.92:381,22,0	0/0:51,0:39:25.25:0,25,755	0/0:51,0:39:1.94:0,2,575	1/1:17,0:24:12.98:221,13,0	1/1:18,0:31:15.99:414,16,0	1/1:22,0:23:28.51:392,29,0	1/1:39,0:38:57.11:1179,57,0	0/1:18,0:26:72.84:458,0,73	1/1:21,0:23:48.14:1136,48,0	1/1:17,0:19:14.21:175,14,0	1/1:12,0:24:17:447,17,0	1/1:20,0:21:30.09:704,30,0	1/1:13,0:24:30.17:857,30,0	0/0:27,0:28:66.17:0,66,1696	1/1:16,19:36:27.80:1324,28,0	1/1:18,3:21:22.22:871,22,0	1/1:15,0:15:18.53:361,19,0	1/1:15,0:16:26.96:485,27,0	0/1:11,0:25:2.51:506,0,3	./.	1/1:16,0:24:20.40:491,20,0	1/1:12,0:18:10.44:266,10,0	1/1:13,0:25:6.18:112,6,0	1/1:8,0:19:22.01:593,22,0	1/1:29,1:34:51.76:1690,52,0	1/1:10,0:22:41.77:976,42,0	1/1:0,0:7:12.04:364,12,0
chr10	20836532	.	CAGAG	C	2917.45	PASS	AB=0.948;AC=27;AF=0.482;AN=56;BaseQRankSum=6.511;DP=696;FS=7.163;HRun=0;HaplotypeScore=222.5983;InbreedingCoeff=-0.5140;MQ=42.19;MQ0=16;MQRankSum=-5.221;QD=5.55;ReadPosRankSum=2.467;VQSLOD=1.6050;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:22:9.75:10,0,88	1/1:9,0:9:13.74:165,14,0	0/0:67,0:33:52.30:0,52,1269	0/0:60,0:27:61.37:0,61,1119	1/1:19,1:20:11.77:159,12,0	0/1:26,0:26:9.73:43,0,10	0/1:25,2:26:82.56:237,0,83	0/1:33,10:43:99:427,0,1465	0/1:22,0:23:99:104,0,206	0/1:22,4:26:90.74:416,0,91	0/1:15,2:17:4.71:81,0,5	0/1:18,0:18:82.54:83,0,194	0/1:16,4:19:99:104,0,300	0/1:26,0:26:70.44:70,0,140	0/0:28,0:28:84.25:0,84,2073	0/1:30,0:30:51.55:52,0,142	0/1:16,0:18:86.94:87,0,203	0/1:14,0:15:80.26:80,0,270	0/1:16,0:14:92.97:141,0,93	0/1:26,0:26:20.82:99,0,21	0/0:13,0:12:0.01:0,0,0	0/1:24,0:24:45.75:46,0,121	0/1:13,0:13:14.15:14,0,46	1/1:22,0:22:2.80:20,3,0	0/1:17,0:17:73.39:73,0,103	0/1:29,7:35:99:464,0,1146	0/1:20,0:20:92.21:92,0,506	0/1:10,0:9:9.70:10,0,168
chr10	20836544	.	CAGAG	C	325.91	PASS	AB=0.957;AC=8;AF=0.143;AN=56;BaseQRankSum=3.354;DP=697;FS=14.699;HRun=0;HaplotypeScore=245.6539;InbreedingCoeff=0.3713;MQ=39.05;MQ0=22;MQRankSum=-1.821;QD=3.47;ReadPosRankSum=-1.534;VQSLOD=1.0646;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:11.84:0,12,219	1/1:8,0:8:10.25:91,10,0	0/0:64,0:22:53.90:0,54,1080	0/0:74,0:29:66.81:0,67,1436	0/1:21,1:22:53.44:99,0,53	0/0:24,0:24:15.78:0,16,236	0/0:26,0:26:13.89:0,14,211	0/0:45,0:44:99:0,120,2475	0/0:26,0:25:25.06:0,25,377	0/1:23,4:27:99:206,0,554	1/1:14,2:16:2.74:44,3,0	0/0:18,0:18:15.18:0,15,492	0/0:21,0:20:30.92:0,31,608	0/0:26,0:26:32.46:0,32,585	0/0:27,0:27:78.26:0,78,1986	0/0:31,0:31:18.24:0,18,197	0/0:20,0:20:32.02:0,32,412	0/0:14,0:13:22.62:0,23,458	0/0:19,0:17:32.43:0,32,680	0/0:25,0:25:14.27:0,14,236	0/1:11,0:10:0:0,0,0	0/0:23,0:23:14.86:0,15,247	0/0:13,0:13:6.49:0,6,132	0/0:20,0:20:4.42:0,4,47	0/0:18,0:18:23.96:0,24,485	0/0:33,0:32:91.46:0,91,1699	0/0:19,0:19:25.73:0,26,701	0/1:10,0:9:10.86:11,0,378
chr10	20836562	.	AACAC	A	3949.43	PASS	AB=0.708;AC=34;AF=0.607;AN=56;BaseQRankSum=-0.741;DP=616;FS=0.000;HRun=0;HaplotypeScore=218.7729;InbreedingCoeff=0.1684;MQ=33.44;MQ0=20;MQRankSum=-1.417;QD=9.21;ReadPosRankSum=3.900;VQSLOD=2.7765;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,5:13:2.25:47,2,0	0/1:3,0:5:4.47:4,0,13	0/0:64,0:20:27.02:0,27,538	0/0:56,0:20:37.88:0,38,609	0/1:17,0:20:11.57:12,0,26	1/1:13,6:19:0.74:18,1,0	0/1:10,18:28:2.27:85,0,2	1/1:17,17:34:42.13:688,42,0	0/1:14,14:27:65:174,0,65	0/1:13,0:24:32.74:120,0,33	0/0:9,0:14:5.72:0,6,29	1/1:8,5:14:17.07:261,17,0	0/1:8,9:16:1.99:229,0,2	1/1:14,10:25:11.69:139,12,0	0/0:20,0:20:48.16:0,48,1179	1/1:11,15:26:4.48:207,4,0	1/1:10,8:18:17.29:260,17,0	1/1:6,5:11:19.53:297,20,0	0/1:15,0:20:85.31:96,0,85	1/1:10,12:22:7.70:120,8,0	0/0:6,5:9:0.47:0,0,1	1/1:15,7:22:3.08:56,3,0	0/1:4,6:11:0.21:47,0,0	0/0:11,10:21:1.41:0,1,2	1/1:14,4:18:1.57:20,2,0	0/1:22,6:29:24.75:662,0,25	1/1:9,6:15:20.62:245,21,0	0/1:4,4:8:0.22:162,0,0
chr10	20836578	.	CACAT	C	2869.24	PASS	AB=0.971;AC=33;AF=0.589;AN=56;BaseQRankSum=2.690;DP=546;FS=3.168;HRun=0;HaplotypeScore=179.1611;InbreedingCoeff=-0.0531;MQ=33.47;MQ0=14;MQRankSum=-0.317;QD=7.26;ReadPosRankSum=4.107;VQSLOD=2.8518;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:7,0:7:12.58:20,0,13	1/1:4,0:4:2.82:20,3,0	0/0:45,0:13:34.15:0,34,564	0/0:56,0:17:21.95:0,22,487	1/1:14,1:15:6.22:41,6,0	0/1:16,1:17:7.09:61,0,7	0/1:23,0:21:1.78:50,0,2	0/1:36,0:36:38.21:422,0,38	0/1:23,1:23:99:129,0,129	0/1:20,0:20:36.57:238,0,37	1/1:12,0:12:4.45:21,4,0	1/1:11,1:13:23.04:208,23,0	0/1:11,2:13:5.53:153,0,6	1/1:22,0:22:2.91:100,3,0	0/0:22,0:22:65.40:0,65,1268	0/1:25,0:25:75.77:80,0,76	0/1:19,0:19:21.65:189,0,22	1/1:10,0:10:11.52:166,12,0	0/1:21,0:22:37.27:248,0,37	0/1:24,0:23:20.43:68,0,20	0/0:11,0:10:0:0,0,0	1/1:16,1:17:3.90:43,4,0	1/1:14,0:14:2.46:58,2,0	0/0:17,0:17:3.87:0,4,18	1/1:12,1:12:0.31:2,0,0	0/1:23,3:25:2.75:457,0,3	1/1:10,0:10:14.65:148,15,0	0/1:9,0:9:1.31:104,0,1
chr10	20836579	.	A	ATT	59.92	PASS	AB=1.000;AC=10;AF=0.179;AN=56;BaseQRankSum=5.324;DP=535;FS=10.318;HRun=0;HaplotypeScore=187.2031;InbreedingCoeff=0.2040;MQ=35.34;MQ0=11;MQRankSum=-1.879;QD=0.51;ReadPosRankSum=-3.341;VQSLOD=0.6721;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:8:6.01:0,6,69	0/1:4,0:4:14.37:14,0,29	0/0:44,0:13:32.96:0,33,442	0/0:57,0:18:38.49:0,38,545	1/1:7,4:11:11.56:83,12,0	0/1:17,0:17:11.51:12,0,96	0/0:23,0:21:9.83:0,10,79	0/0:35,0:35:77.50:0,77,736	0/0:25,0:24:32.44:0,32,322	0/0:19,0:20:9.87:0,10,119	1/1:9,2:11:8.90:60,9,0	0/1:13,0:13:2.54:3,0,55	0/0:13,0:13:26.47:0,26,243	0/0:22,0:22:14.53:0,15,126	0/0:22,0:22:66.23:0,66,1057	0/1:25,0:25:3.31:3,0,210	0/1:18,0:18:14.58:15,0,101	0/0:10,0:10:7.96:0,8,112	0/1:19,0:19:3.29:3,0,267	0/0:24,0:23:14.58:0,15,140	0/0:9,0:8:0.47:0,0,1	0/0:17,0:17:5.78:0,6,46	0/0:14,0:14:3.46:0,3,30	0/0:17,0:17:3:0,3,33	0/0:13,0:12:2.98:0,3,22	0/0:25,0:24:62.37:0,62,532	0/0:10,0:10:17.40:0,17,124	0/0:9,0:9:12.18:0,12,130
chr10	20837184	.	TG	T	2352.43	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=6.738;DP=730;FS=2.106;HRun=3;HaplotypeScore=85.0561;InbreedingCoeff=0.9976;MQ=92.69;MQ0=0;MQRankSum=-0.695;QD=33.13;ReadPosRankSum=-0.132;VQSLOD=3.7417;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,126,1779	1/1:0,6:6:18.06:223,18,0	0/0:28,0:28:45.77:0,46,1007	0/0:35,0:35:90.25:0,90,1238	1/1:0,19:19:54.17:669,54,0	0/0:16,0:16:48.14:0,48,654	0/0:44,0:44:99:0,132,1900	0/0:30,0:30:87.28:0,87,1216	0/0:32,0:32:96.32:0,96,1381	1/1:0,22:22:63.20:781,63,0	1/1:0,9:9:24.07:298,24,0	0/0:44,0:44:99:0,126,1797	0/0:34,0:34:99:0,99,1406	0/0:21,0:21:60.20:0,60,863	0/0:31,0:31:93.30:0,93,1320	0/0:25,0:25:72.23:0,72,1036	0/0:37,0:37:99:0,108,1555	0/0:29,0:29:87.29:0,87,1244	1/1:0,15:15:45.14:557,45,0	0/0:13,0:13:33.10:0,33,454	0/0:49,0:49:99:0,147,2092	0/0:16,0:16:45.14:0,45,628	0/0:15,0:15:45.14:0,45,625	0/0:30,0:30:90.26:0,90,1273	0/0:16,0:16:45.12:0,45,625	0/0:30,1:31:50.05:0,50,1134	0/0:24,0:24:66.21:0,66,932	0/0:15,0:15:45.15:0,45,648
chr10	20837792	.	GA	G	11165.74	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-2.342;DP=618;FS=11.546;HRun=8;HaplotypeScore=66.6765;InbreedingCoeff=0.9834;MQ=80.81;MQ0=0;MQRankSum=-6.449;QD=23.31;ReadPosRankSum=4.048;VQSLOD=4.8529;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,43:48:91.23:995,91,0	0/0:8,0:8:18.06:0,18,217	0/0:23,0:22:18.51:0,19,434	0/0:22,0:21:31.20:0,31,391	0/0:17,0:17:48.15:0,48,579	1/1:0,23:23:57.09:550,57,0	1/1:4,31:35:78.12:752,78,0	1/1:2,18:20:51.02:470,51,0	1/1:2,15:17:39.06:376,39,0	0/0:17,1:18:19.20:0,19,506	0/0:10,0:10:27.07:0,27,314	1/1:3,16:19:42.07:405,42,0	1/1:8,16:24:47.87:447,48,0	1/1:5,21:26:60.09:578,60,0	0/0:27,0:27:75.22:0,75,894	1/1:0,19:19:54.09:521,54,0	1/1:3,44:47:99:1070,111,0	1/1:3,30:33:84.13:810,84,0	0/0:14,0:14:39.11:0,39,461	1/1:0,13:13:39.06:376,39,0	1/1:3,35:38:99:955,99,0	1/1:2,8:10:24.04:231,24,0	1/1:1,17:18:41.77:404,42,0	1/1:0,16:16:45.07:434,45,0	1/1:3,17:20:48.06:459,48,0	1/1:3,21:24:14.98:552,15,0	1/1:0,25:25:72.12:694,72,0	1/1:1,3:4:9.01:87,9,0
chr10	20840110	.	CTG	C	3534.11	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=11.447;DP=674;FS=0.431;HRun=0;HaplotypeScore=81.1079;InbreedingCoeff=0.9987;MQ=86.46;MQ0=0;MQRankSum=-0.822;QD=39.71;ReadPosRankSum=0.724;VQSLOD=4.9499;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,117,2181	1/1:1,13:14:39.13:574,39,0	0/0:21,0:21:51.78:0,52,846	0/0:26,0:25:58.63:0,59,947	1/1:1,12:14:33.11:486,33,0	0/0:26,0:26:75.26:0,75,1392	0/0:36,0:36:99:0,102,1818	0/0:33,0:33:84.27:0,84,1469	0/0:23,0:23:69.24:0,69,1292	1/1:2,28:30:81.25:1193,81,0	1/1:1,14:15:45.15:659,45,0	0/0:25,0:25:72.25:0,72,1318	0/0:28,0:28:78.27:0,78,1442	0/0:29,0:29:87.30:0,87,1619	0/0:28,0:28:81.28:0,81,1509	0/0:13,0:13:36.12:0,36,656	0/0:31,0:31:93.32:0,93,1741	0/0:39,0:39:99:0,111,2063	1/1:1,15:16:45.12:623,45,0	0/0:20,0:20:60.19:0,60,1081	0/0:32,0:32:96.33:0,96,1777	0/0:29,0:29:87.30:0,87,1611	0/0:20,0:20:57.18:0,57,1026	0/0:17,0:17:51.16:0,51,904	0/0:17,0:17:51.17:0,51,955	0/0:23,1:24:28.03:0,28,1214	0/0:22,0:22:66.20:0,66,1184	0/0:7,0:7:21.05:0,21,361
chr10	20844040	.	A	AG	6134.57	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-2.436;DP=564;FS=8.996;HRun=6;HaplotypeScore=82.3573;InbreedingCoeff=0.9299;MQ=71.78;MQ0=21;MQRankSum=-1.435;QD=16.27;ReadPosRankSum=0.171;VQSLOD=3.9771;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:11,22:32:31.99:392,32,0	0/0:7,0:7:18.04:0,18,182	0/0:49,0:17:26.55:0,27,231	0/0:28,0:17:9.17:0,9,144	0/0:27,0:27:54.05:0,54,535	1/1:11,5:15:29.46:347,29,0	1/1:15,5:18:4.78:210,5,0	1/1:12,19:30:56.13:629,56,0	1/1:14,4:17:33.19:419,33,0	0/0:20,0:20:33.05:0,33,337	0/0:17,0:16:45.09:0,45,452	1/1:10,4:14:30.07:349,30,0	1/1:13,2:15:24.54:290,25,0	1/1:11,3:14:19.75:206,20,0	0/0:20,0:20:44.35:0,44,396	1/1:2,11:13:12.04:150,12,0	1/1:22,7:25:36.31:360,36,0	1/1:16,3:15:23.30:228,23,0	0/0:18,0:18:38.99:0,39,377	1/1:17,3:19:36.10:432,36,0	1/1:3,3:6:9.03:113,9,0	1/1:16,5:21:42.10:504,42,0	1/1:16,7:21:23.15:273,23,0	1/1:8,6:11:24.04:276,24,0	1/1:1,11:12:15.05:186,15,0	1/1:22,3:24:37.93:451,38,0	1/1:7,19:26:25.57:267,26,0	1/1:7,0:6:5.81:51,6,0
chr10	20844072	.	T	TCC	3534.69	PASS	AC=38;AF=0.731;AN=52;BaseQRankSum=2.625;DP=327;FS=0.000;HRun=0;HaplotypeScore=65.7320;InbreedingCoeff=0.8096;MQ=37.86;MQ0=32;MQRankSum=-3.739;QD=15.11;ReadPosRankSum=1.789;VQSLOD=3.4723;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:17:32.45:272,32,0	0/0:7,0:7:18.06:0,18,240	./.	0/0:8,0:1:3.01:0,3,31	0/0:15,0:14:18.04:0,18,206	1/1:19,1:16:23.89:265,24,0	1/1:10,2:10:29.63:252,30,0	1/1:18,2:18:42.12:495,42,0	1/1:14,1:14:26.81:251,27,0	0/0:13,0:13:26.92:0,27,284	0/0:6,0:5:6.02:0,6,68	1/1:7,0:7:8.94:83,9,0	1/1:11,1:11:20.73:204,21,0	1/1:5,0:5:11.76:109,12,0	0/0:13,0:12:30.09:0,30,380	1/1:2,0:2:5.97:57,6,0	1/1:13,2:11:23.43:186,23,0	1/1:11,3:9:15.76:146,16,0	0/0:13,0:11:26.36:0,26,253	1/1:6,9:14:8.98:77,9,0	./.	1/1:3,7:10:9.02:95,9,0	1/1:14,0:13:23.85:262,24,0	1/1:4,5:7:5.78:53,6,0	1/1:5,0:5:9.88:88,10,0	1/1:16,0:15:0.75:318,1,0	1/1:7,1:8:14.55:92,15,0	1/1:16,0:11:20.92:231,21,0
chr10	20844132	.	T	TA	1976.21	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-6.131;DP=465;FS=6.465;HRun=3;HaplotypeScore=71.9681;InbreedingCoeff=0.8816;MQ=53.53;MQ0=9;MQRankSum=1.479;QD=34.07;ReadPosRankSum=2.278;VQSLOD=4.3629;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:24:57.17:0,57,683	0/0:9,0:9:24.07:0,24,288	0/0:4,0:3:9.03:0,9,108	0/0:9,0:4:12.04:0,12,144	0/0:16,0:15:24.07:0,24,288	0/0:27,0:27:81.25:0,81,972	0/0:13,0:13:36.11:0,36,426	0/0:26,0:24:66.20:0,66,791	0/0:20,0:20:51.16:0,51,612	0/0:18,0:17:51.16:0,51,612	0/0:14,0:14:36.11:0,36,432	0/0:10,0:10:27.08:0,27,323	0/0:16,0:16:39.12:0,39,468	0/0:5,0:5:15.05:0,15,179	0/0:23,0:22:63.19:0,63,756	1/1:0,21:21:60.20:840,60,0	1/1:1,21:20:60.20:840,60,0	1/1:1,14:15:1.95:428,2,0	0/0:18,0:16:44.31:0,44,486	0/0:20,0:19:39.12:0,39,468	0/0:23,0:22:57.17:0,57,684	0/0:20,0:20:42.13:0,42,501	0/0:17,0:17:45.14:0,45,536	0/0:16,0:16:30.08:0,30,348	0/0:13,0:13:27.08:0,27,324	0/0:23,0:23:63.18:0,63,745	0/0:14,0:14:42.13:0,42,504	0/0:8,0:6:18.06:0,18,216
chr10	20844910	.	T	TA	4947.14	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=7.657;DP=690;FS=6.889;HRun=1;HaplotypeScore=83.6661;InbreedingCoeff=0.9978;MQ=88.53;MQ0=0;MQRankSum=-1.892;QD=41.23;ReadPosRankSum=1.393;VQSLOD=5.1341;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,120,1590	0/0:7,0:7:21.02:0,21,265	0/0:34,0:34:93.04:0,93,1116	0/0:20,0:22:24.99:0,25,490	0/0:24,0:24:72.20:0,72,959	0/0:19,0:19:54.18:0,54,752	0/0:19,0:19:57.16:0,57,760	1/1:0,27:26:80.99:1181,81,0	0/0:24,0:24:72.24:0,72,1003	0/0:13,0:13:36.10:0,36,456	0/0:20,0:20:59.99:0,60,784	0/0:32,0:32:96.24:0,96,1234	0/0:25,0:25:75.21:0,75,993	0/0:29,0:29:84.24:0,84,1099	0/0:22,0:22:60.20:0,60,835	1/1:0,34:34:96.33:1525,96,0	1/1:0,31:31:75.26:1195,75,0	1/1:0,28:28:66.22:1047,66,0	0/0:23,0:23:69.20:0,69,893	0/0:30,0:30:87.16:0,87,1089	0/0:17,0:17:45.08:0,45,544	0/0:20,0:20:51.13:0,51,671	0/0:27,0:27:69.17:0,69,892	0/0:38,0:38:99:0,114,1555	0/0:23,0:23:69.21:0,69,923	0/0:24,0:24:72.14:0,72,920	0/0:30,0:29:90.22:0,90,1183	0/0:8,0:8:24.01:0,24,274
chr10	20846681	.	ACC	A	9662.75	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=13.860;DP=366;FS=4.323;HRun=4;HaplotypeScore=116.1003;InbreedingCoeff=0.9744;MQ=73.51;MQ0=0;MQRankSum=-11.952;QD=41.47;ReadPosRankSum=3.756;VQSLOD=3.7002;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,23:23:66.22:969,66,0	1/1:1,5:6:15.05:220,15,0	0/0:13,0:13:33.11:0,33,599	0/0:18,1:19:36.80:0,37,888	1/1:1,15:16:45.15:661,45,0	1/1:0,9:9:24.08:353,24,0	1/1:0,12:12:33.11:484,33,0	0/0:20,0:19:57.20:0,57,1053	1/1:0,9:9:24.08:353,24,0	1/1:0,8:8:24.08:352,24,0	1/1:0,13:13:38.87:541,39,0	1/1:0,11:11:33.11:485,33,0	1/1:0,14:14:42.14:617,42,0	1/1:0,7:7:18.06:265,18,0	0/0:16,0:15:45.15:0,45,839	0/0:14,0:14:39.13:0,39,730	0/0:30,0:30:84.27:0,84,1515	0/0:21,0:21:60.17:0,60,1088	1/1:0,10:10:30.10:441,30,0	1/1:0,17:17:51.17:750,51,0	1/1:0,2:2:6.02:88,6,0	1/1:2,8:10:24.08:353,24,0	1/1:0,11:11:30.10:441,30,0	1/1:1,11:12:27:396,27,0	1/1:0,10:10:30.10:441,30,0	1/1:0,12:12:36.12:529,36,0	1/1:0,8:8:24.08:353,24,0	1/1:0,13:13:39.13:573,39,0
chr10	20846802	.	GA	G	1943.43	PASS	AB=0.724;AC=41;AF=0.732;AN=56;BaseQRankSum=0.151;DP=524;FS=10.996;HRun=16;HaplotypeScore=67.9074;InbreedingCoeff=0.1014;MQ=55.75;MQ0=20;MQRankSum=0.582;QD=4.61;ReadPosRankSum=3.882;VQSLOD=0.7911;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:16,20:38:20.86:105,0,21	1/1:1,0:8:9.01:34,9,0	0/0:48,2:9:5.93:0,6,40	0/0:37,0:7:9.70:0,10,47	1/1:9,0:20:19.49:55,19,0	1/1:5,8:13:14.28:83,14,0	1/1:7,7:13:17.40:106,17,0	0/1:14,6:19:41.52:74,0,42	1/1:2,5:7:11.63:72,12,0	0/1:18,0:23:6.32:32,0,6	1/1:7,1:15:5.78:54,6,0	1/1:8,4:11:10.95:75,11,0	0/1:9,3:11:6.16:53,0,6	1/1:12,2:15:17.04:98,17,0	0/0:14,0:14:26.97:0,27,226	1/1:7,2:9:18.61:105,19,0	1/1:26,10:35:13.85:284,14,0	1/1:12,6:16:10.48:170,10,0	0/1:20,0:28:21.60:30,0,22	1/1:14,1:14:9.31:53,9,0	1/1:4,1:4:10.74:55,11,0	1/1:5,1:5:2.83:18,3,0	0/1:8,9:17:9.41:70,0,9	1/1:3,7:10:10.56:70,11,0	0/1:12,2:14:23.03:82,0,23	1/1:11,7:18:25.14:144,25,0	0/1:6,13:18:25.82:98,0,26	0/1:11,13:23:22.29:89,0,22
chr10	20846850	.	C	CT	2123.34	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-5.083;DP=485;FS=11.223;HRun=7;HaplotypeScore=63.0749;InbreedingCoeff=0.9915;MQ=77.02;MQ0=0;MQRankSum=-2.465;QD=27.94;ReadPosRankSum=0.220;VQSLOD=3.6787;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:96.14:0,96,921	0/0:9,0:9:21.03:0,21,203	0/0:19,0:18:37.85:0,38,348	0/0:18,0:17:37.83:0,38,337	0/0:23,0:23:54.06:0,54,514	0/0:10,0:10:21.03:0,21,202	0/0:14,0:14:39.06:0,39,377	1/1:4,14:18:42.13:507,42,0	0/0:9,0:9:18.01:0,18,223	0/0:20,0:20:51.07:0,51,493	0/0:17,0:17:39.05:0,39,372	0/0:16,0:16:48.02:0,48,444	0/0:13,0:13:36.06:0,36,346	0/0:19,0:19:48.07:0,48,463	0/0:20,0:20:54.06:0,54,515	1/1:1,21:22:63.19:761,63,0	1/1:2,18:20:51.14:603,51,0	1/1:3,13:16:36.09:413,36,0	0/0:23,0:23:63.10:0,63,607	0/0:7,0:7:18.03:0,18,174	0/0:11,0:11:30.05:0,30,290	0/0:9,0:9:27.04:0,27,261	0/0:22,0:22:45.06:0,45,434	0/0:7,0:7:21.03:0,21,203	0/0:15,0:15:42.07:0,42,406	0/0:17,0:17:48.08:0,48,463	0/0:25,0:25:66.11:0,66,636	0/0:24,0:24:51.08:0,51,492
chr10	20847481	.	G	GT	9526.95	PASS	AB=0.750;AC=54;AF=0.964;AN=56;BaseQRankSum=-2.256;DP=378;FS=20.636;HRun=4;HaplotypeScore=96.5226;InbreedingCoeff=-0.0443;MQ=55.34;MQ0=0;MQRankSum=-3.440;QD=25.20;ReadPosRankSum=2.231;VQSLOD=3.3103;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,1:13:33.66:321,34,0	1/1:1,8:8:21.07:287,21,0	0/1:8,6:9:43.59:138,0,44	0/1:9,3:10:58.85:145,0,59	1/1:1,28:27:63.20:835,63,0	1/1:1,0:9:19.57:139,20,0	1/1:1,0:10:9.91:61,10,0	1/1:4,23:27:75.19:986,75,0	1/1:1,0:10:24.59:127,25,0	1/1:0,23:23:66.22:889,66,0	1/1:1,7:7:18.06:246,18,0	1/1:1,3:11:32.10:302,32,0	1/1:2,4:9:23.21:224,23,0	1/1:1,1:6:14.48:123,14,0	1/1:2,11:13:24.08:328,24,0	1/1:1,17:18:51.17:697,51,0	1/1:6,15:21:45.12:613,45,0	1/1:1,20:21:42.14:574,42,0	1/1:1,12:13:36.12:491,36,0	1/1:2,3:13:31.23:282,31,0	1/1:1,6:10:26.09:310,26,0	1/1:3,1:6:14.36:134,14,0	1/1:3,0:6:14.36:120,14,0	1/1:4,1:9:20.73:185,21,0	1/1:1,0:8:21.15:130,21,0	1/1:6,3:21:51.23:455,51,0	1/1:2,2:9:26.14:262,26,0	1/1:3,3:6:9.03:123,9,0
chr10	20847496	.	T	TC	1163.90	PASS	AB=0.974;AC=22;AF=0.393;AN=56;BaseQRankSum=4.042;DP=339;FS=2.925;HRun=0;HaplotypeScore=121.9445;InbreedingCoeff=0.1961;MQ=48.97;MQ0=0;MQRankSum=-5.662;QD=6.47;ReadPosRankSum=2.720;VQSLOD=3.6879;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:12,0:12:50.21:107,0,50	0/0:8,0:7:21.07:0,21,293	0/0:15,0:3:3.48:0,3,33	0/1:23,0:9:7.24:7,0,110	0/0:24,0:22:63.21:0,63,864	0/1:8,0:8:5.91:110,0,6	0/1:9,0:7:1.02:36,0,1	0/0:19,0:18:51.16:0,51,687	1/1:11,0:11:22.98:115,23,0	0/0:17,0:16:45.88:0,46,575	0/0:10,0:9:21.07:0,21,283	1/1:11,0:10:21.14:141,21,0	0/1:6,2:8:0.15:119,0,0	1/1:4,1:5:14.16:110,14,0	0/0:8,0:8:21.54:0,22,294	0/0:15,0:15:45:0,45,533	0/0:14,0:14:38.45:0,38,484	0/0:15,0:15:42.11:0,42,560	0/0:14,0:14:42.14:0,42,562	0/1:18,0:14:70.94:104,0,71	1/1:7,0:7:11.24:80,11,0	0/1:12,0:7:14.28:14,0,30	0/1:8,0:6:17.83:18,0,79	1/1:5,0:5:8.88:73,9,0	0/1:11,0:11:39.12:39,0,79	0/1:18,0:17:72.87:129,0,73	0/1:7,1:8:7.58:124,0,8	0/1:6,0:3:8.48:19,0,8
chr10	20847511	.	TC	T	3022.91	PASS	AB=1.000;AC=50;AF=0.893;AN=56;BaseQRankSum=0.424;DP=404;FS=5.778;HRun=1;HaplotypeScore=117.6073;InbreedingCoeff=0.4494;MQ=38.92;MQ0=10;MQRankSum=1.529;QD=8.13;ReadPosRankSum=-0.257;VQSLOD=0.6721;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:16,1:15:16.17:96,16,0	1/1:5,2:6:12.29:89,12,0	0/1:24,0:4:9.06:9,0,34	0/0:27,0:8:6.25:0,6,51	1/1:21,2:21:41.65:299,42,0	1/1:7,3:9:22.65:139,23,0	1/1:11,0:8:14.41:93,14,0	1/1:16,4:19:27.04:199,27,0	1/1:11,0:11:14.99:104,15,0	1/1:14,1:13:26.23:219,26,0	1/1:7,2:8:14.54:91,15,0	1/1:13,1:11:20.13:136,20,0	1/1:11,0:10:12.59:84,13,0	1/1:12,0:11:17.59:130,18,0	0/0:4,0:4:8.24:0,8,77	1/1:17,1:17:3.09:76,3,0	1/1:15,1:16:29.88:184,30,0	1/1:16,2:13:14.91:143,15,0	1/1:15,0:13:23.15:189,23,0	1/1:18,0:14:20.33:120,20,0	1/1:6,0:6:9.33:53,9,0	1/1:13,0:7:11.56:65,12,0	1/1:8,1:7:12.89:64,13,0	0/1:12,0:9:10.70:51,0,11	1/1:18,0:15:27.14:149,27,0	1/1:17,4:20:37.19:239,37,0	1/1:17,0:15:8.30:102,8,0	1/1:5,1:3:5.71:32,6,0
chr10	20847520	.	TTATTTTATTTTTTTA	T	6323.37	PASS	AB=1.000;AC=52;AF=0.929;AN=56;BaseQRankSum=-0.946;DP=402;FS=10.440;HRun=0;HaplotypeScore=165.6761;InbreedingCoeff=0.3946;MQ=43.09;MQ0=12;MQRankSum=0.325;QD=16.95;ReadPosRankSum=1.337;VQSLOD=3.3585;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:13,1:12:14.26:183,14,0	1/1:5,1:5:9.01:107,9,0	0/0:29,0:6:16.02:0,16,133	0/1:33,0:9:6.59:7,0,94	1/1:24,0:22:53.78:571,54,0	1/1:8,2:9:8.46:409,8,0	1/1:12,0:9:17.90:164,18,0	1/1:20,0:19:15.64:164,16,0	1/1:7,0:7:6.43:38,6,0	1/1:13,0:11:32.72:311,33,0	1/1:9,2:9:15.59:366,16,0	1/1:14,0:11:21.11:202,21,0	1/1:9,0:8:14.03:83,14,0	1/1:13,0:12:17.66:181,18,0	0/1:5,0:5:22.06:48,0,22	1/1:17,0:16:18.41:230,18,0	1/1:16,0:15:31.83:288,32,0	1/1:17,0:12:21.55:257,22,0	1/1:15,0:13:17.03:283,17,0	1/1:17,0:13:32.55:356,33,0	1/1:6,0:6:11.44:65,11,0	1/1:12,0:6:14.11:111,14,0	1/1:9,0:8:15.28:326,15,0	1/1:12,0:9:17.92:205,18,0	1/1:19,0:16:35.80:389,36,0	1/1:17,2:18:52.26:671,52,0	1/1:15,0:13:26.34:222,26,0	1/1:6,1:4:5.99:88,6,0
chr10	20847521	.	TATTTTA	T	3705.98	PASS	AB=0.983;AC=49;AF=0.875;AN=56;BaseQRankSum=-4.235;DP=377;FS=10.560;HRun=0;HaplotypeScore=120.5094;InbreedingCoeff=0.1029;MQ=47.46;MQ0=12;MQRankSum=-0.599;QD=10.68;ReadPosRankSum=-3.738;VQSLOD=0.8211;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:13,1:12:7.05:57,7,0	1/1:3,1:4:9.01:106,9,0	0/0:30,0:7:2.58:0,3,74	0/1:34,0:10:1.93:2,0,53	1/1:22,1:22:47.60:357,48,0	1/1:10,0:9:7.93:90,8,0	1/1:10,1:8:17.75:122,18,0	1/1:13,0:13:10.15:124,10,0	0/1:5,0:5:12.22:12,0,30	1/1:11,1:11:32.87:298,33,0	1/1:8,2:9:17.11:209,17,0	1/1:13,0:10:16.65:122,17,0	1/1:8,1:8:11.83:78,12,0	0/1:13,0:12:6.58:93,0,7	1/1:2,2:4:9.03:160,9,0	0/1:16,0:16:16.35:122,0,16	1/1:14,0:15:32.08:259,32,0	1/1:15,0:10:0.79:165,1,0	1/1:14,0:12:29.80:246,30,0	0/1:15,0:11:5.39:97,0,5	1/1:5,0:6:9.82:66,10,0	1/1:8,0:4:4.66:38,5,0	1/1:7,1:8:14.53:140,15,0	1/1:9,2:9:14.93:136,15,0	1/1:16,2:15:10.43:168,10,0	1/1:15,2:18:28.99:319,29,0	1/1:13,1:12:5.69:80,6,0	1/1:5,1:3:3.01:40,3,0
chr10	20847525	.	T	TC	128.95	PASS	AB=0.959;AC=12;AF=0.214;AN=56;BaseQRankSum=-0.645;DP=379;FS=1.748;HRun=0;HaplotypeScore=124.1569;InbreedingCoeff=-0.1486;MQ=48.30;MQ0=12;MQRankSum=-0.323;QD=0.72;ReadPosRankSum=0.561;VQSLOD=2.3865;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:14:8.13:0,8,37	0/0:4,0:3:3.89:0,4,27	0/1:32,0:7:11.12:11,0,60	0/1:34,1:10:14.70:15,0,54	0/0:19,1:18:24.89:0,25,158	0/0:12,0:11:11.66:0,12,69	0/1:12,0:9:1.34:1,0,68	0/0:14,1:15:15.44:0,15,97	0/0:6,0:6:7.22:0,7,50	0/0:13,0:10:15.64:0,16,112	0/0:11,1:11:13.69:0,14,74	0/0:13,0:10:12.02:0,12,57	0/0:8,0:7:2.90:0,3,16	0/0:12,0:11:17.31:0,17,85	0/0:4,0:4:3.34:0,3,29	0/0:16,0:15:7.25:0,7,74	0/1:16,0:15:34.41:34,0,69	0/1:15,1:11:20.31:86,0,20	0/1:10,1:9:12.18:12,0,108	0/1:14,2:12:47.35:47,0,86	0/0:6,0:6:11.05:0,11,56	0/0:7,0:4:4.60:0,5,22	0/1:6,1:7:17.38:17,0,47	0/1:13,0:10:12.06:13,0,12	0/0:16,0:13:10.02:0,10,47	0/0:19,0:19:23.13:0,23,152	0/1:14,0:12:4.21:4,0,57	1/1:7,0:4:2.91:24,3,0
chr10	20847526	.	TA	T	2121.06	PASS	AB=0.963;AC=53;AF=0.946;AN=56;BaseQRankSum=-1.732;DP=349;FS=2.416;HRun=1;HaplotypeScore=91.1696;InbreedingCoeff=0.1245;MQ=52.94;MQ0=13;MQRankSum=-2.120;QD=6.08;ReadPosRankSum=0.548;VQSLOD=0.5250;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:12:11.51:89,12,0	1/1:4,0:3:3.47:26,3,0	0/1:32,0:9:2.02:2,0,66	0/1:35,0:10:4.64:5,0,29	1/1:15,0:14:8.82:30,9,0	1/1:12,0:11:25.58:167,26,0	1/1:9,2:8:15.12:99,15,0	1/1:14,1:15:21.11:130,21,0	1/1:5,0:5:2.45:19,2,0	1/1:7,1:5:9.75:64,10,0	1/1:12,0:11:18.05:127,18,0	1/1:10,1:8:12.50:90,12,0	1/1:6,0:5:5.19:27,5,0	1/1:11,1:11:17.17:119,17,0	1/1:4,0:4:8.73:60,9,0	0/1:14,2:15:7.97:48,0,8	1/1:13,3:15:17.80:150,18,0	1/1:15,1:11:19.06:129,19,0	1/1:10,1:9:16.70:137,17,0	1/1:13,0:11:9.36:56,9,0	1/1:6,0:5:7.27:36,7,0	1/1:3,0:2:3.41:19,3,0	1/1:7,0:7:10.69:73,11,0	1/1:10,2:9:14.34:86,14,0	1/1:10,3:10:15.88:103,16,0	1/1:15,1:16:28.90:259,29,0	1/1:12,0:11:9.36:43,9,0	1/1:7,0:4:5.80:33,6,0
chr10	20847532	.	TTTA	T	1856.76	PASS	AB=0.976;AC=49;AF=0.875;AN=56;BaseQRankSum=-1.413;DP=378;FS=0.000;HRun=0;HaplotypeScore=105.2249;InbreedingCoeff=0.1541;MQ=55.80;MQ0=13;MQRankSum=-1.230;QD=5.43;ReadPosRankSum=-1.363;VQSLOD=2.1831;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:15,1:14:0.25:68,0,0	0/1:3,0:2:0:0,0,0	0/0:36,0:12:5.23:0,5,100	0/1:37,0:10:5.60:7,0,6	1/1:16,0:14:23.43:143,23,0	1/1:15,0:14:13.83:86,14,0	1/1:11,0:8:8.05:56,8,0	1/1:16,0:16:3.02:52,3,0	1/1:8,0:8:9.82:59,10,0	1/1:9,0:6:8.52:46,9,0	1/1:11,1:11:20.19:129,20,0	1/1:11,0:8:10.38:47,10,0	1/1:6,0:5:1.53:15,2,0	1/1:12,0:11:0.51:26,1,0	1/1:4,0:4:6.48:60,6,0	1/1:16,0:15:6.22:68,6,0	1/1:16,0:15:6.02:139,6,0	1/1:17,0:12:17.66:159,18,0	1/1:11,0:9:11.66:91,12,0	1/1:15,0:13:13.24:94,13,0	1/1:7,0:6:9:51,9,0	1/1:6,0:4:9.68:53,10,0	1/1:8,0:8:18.06:113,18,0	1/1:11,1:9:12.54:66,13,0	1/1:14,0:11:12.07:47,12,0	0/1:18,0:18:13.92:152,0,14	0/1:14,1:13:6.08:38,0,6	1/1:10,1:7:14.85:104,15,0
chr10	20847533	.	TTA	T	2468.99	PASS	AB=0.917;AC=51;AF=0.911;AN=56;BaseQRankSum=-1.192;DP=375;FS=6.536;HRun=0;HaplotypeScore=98.0115;InbreedingCoeff=0.2812;MQ=55.99;MQ0=11;MQRankSum=-1.431;QD=7.24;ReadPosRankSum=-1.170;VQSLOD=2.5666;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:14:4.60:86,5,0	0/1:2,1:2:0:0,0,0	0/0:33,0:12:3.76:0,4,78	0/1:37,0:10:9.09:9,0,31	1/1:16,0:14:26.13:150,26,0	1/1:15,0:14:24.09:147,24,0	1/1:11,0:8:13.36:79,13,0	1/1:17,0:17:8.15:109,8,0	1/1:8,0:8:14.36:85,14,0	1/1:7,1:5:10.42:82,10,0	1/1:12,0:11:19.87:116,20,0	1/1:11,0:8:12.25:68,12,0	1/1:6,0:5:0.28:14,0,0	1/1:12,0:11:16.04:97,16,0	1/1:4,0:4:6.39:43,6,0	0/1:15,0:14:1.08:77,0,1	1/1:16,0:15:29.34:202,29,0	1/1:16,1:12:16.20:187,16,0	1/1:11,0:9:7.83:126,8,0	1/1:15,0:13:20.27:120,20,0	1/1:8,0:6:9.66:55,10,0	1/1:6,0:4:9.87:54,10,0	1/1:7,1:8:12.71:111,13,0	1/1:11,1:9:15.68:92,16,0	1/1:12,2:11:17.24:85,17,0	1/1:17,0:17:11.40:218,11,0	1/1:15,0:13:9.09:57,9,0	1/1:11,0:7:14.85:103,15,0
chr10	20847534	.	TA	T	3039.57	PASS	AB=0.916;AC=54;AF=0.964;AN=56;BaseQRankSum=-1.528;DP=371;FS=6.572;HRun=1;HaplotypeScore=90.7204;InbreedingCoeff=0.1500;MQ=56.23;MQ0=11;MQRankSum=-0.998;QD=8.19;ReadPosRankSum=-0.585;VQSLOD=0.4682;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:14:16.27:113,16,0	1/1:3,0:2:0.89:2,1,0	0/1:31,1:12:8.88:9,0,86	0/1:30,6:10:6.28:22,0,6	1/1:14,1:13:24.93:149,25,0	1/1:15,0:14:29.43:195,29,0	1/1:8,3:8:15.21:101,15,0	1/1:17,1:18:26.28:196,26,0	1/1:8,0:8:17.79:118,18,0	1/1:7,1:5:9.85:67,10,0	1/1:11,1:11:21.54:139,22,0	1/1:11,0:8:11.95:102,12,0	1/1:6,0:5:5.31:26,5,0	1/1:12,0:11:20.67:133,21,0	1/1:3,1:4:6.76:38,7,0	1/1:12,1:12:9.53:70,10,0	1/1:14,2:15:29.73:233,30,0	1/1:14,2:11:21.05:176,21,0	1/1:11,0:9:19.52:158,20,0	1/1:15,0:13:25.09:159,25,0	1/1:8,0:6:11.74:74,12,0	1/1:6,0:4:10.16:63,10,0	1/1:8,0:8:18.72:120,19,0	1/1:10,2:9:15.30:102,15,0	1/1:13,1:11:20.47:130,20,0	1/1:14,3:17:29.22:262,29,0	1/1:15,0:13:15.61:82,16,0	1/1:11,0:7:14.80:96,15,0
chr10	20847548	.	C	CTT	2489.25	PASS	AB=0.803;AC=32;AF=0.571;AN=56;BaseQRankSum=2.677;DP=363;FS=13.853;HRun=9;HaplotypeScore=80.1062;InbreedingCoeff=0.6249;MQ=57.70;MQ0=27;MQRankSum=-5.053;QD=11.06;ReadPosRankSum=2.775;VQSLOD=0.3277;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:6,8:14:10.86:248,0,11	0/0:6,0:5:6:0,6,64	0/1:23,0:10:8.55:9,0,32	0/0:21,0:8:8.18:0,8,56	0/0:15,0:14:12.01:0,12,128	1/1:5,9:13:20.56:285,21,0	1/1:11,3:10:14.54:185,15,0	0/0:19,0:18:38.99:0,39,390	1/1:3,3:7:9.03:120,9,0	0/1:16,1:14:12.43:12,0,283	0/0:17,0:17:35.57:0,36,363	1/1:2,5:7:8.52:101,9,0	0/1:2,2:4:0:0,0,0	1/1:0,5:6:8:63,8,0	0/0:6,0:6:11.96:0,12,128	0/0:10,0:10:5.74:0,6,64	0/0:14,0:14:11.70:0,12,108	0/0:17,0:12:17.96:0,18,179	0/0:9,0:7:15.03:0,15,160	1/1:2,9:13:20.51:259,21,0	1/1:4,2:4:3.48:47,3,0	1/1:1,5:7:15.05:223,15,0	1/1:4,5:9:14.45:140,14,0	1/1:6,7:12:6.02:92,6,0	1/1:8,5:9:6.49:93,6,0	1/1:12,7:17:30.57:444,31,0	1/1:6,7:11:9.03:138,9,0	1/1:4,7:9:15.05:225,15,0
chr10	20848189	.	GC	G	9068.78	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=10.159;DP=528;FS=1.597;HRun=1;HaplotypeScore=164.6339;InbreedingCoeff=0.9895;MQ=90.68;MQ0=0;MQRankSum=-9.163;QD=19.63;ReadPosRankSum=4.460;VQSLOD=5.1978;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:31,7:38:95.96:758,96,0	1/1:5,2:6:16.95:125,17,0	0/0:26,0:26:72.23:0,72,1077	0/0:21,0:21:58.98:0,59,840	1/1:18,13:30:48.31:350,48,0	1/1:16,6:22:60.15:463,60,0	1/1:14,5:19:50.80:390,51,0	1/1:0,12:12:31.49:200,31,0	1/1:14,2:16:36.66:331,37,0	1/1:15,13:28:75.97:604,76,0	1/1:5,5:10:18.66:131,19,0	1/1:20,4:24:69.70:572,70,0	1/1:13,3:16:40.81:306,41,0	1/1:10,5:15:33.44:228,33,0	0/0:19,0:19:57.19:0,57,909	1/1:14,2:16:45.77:386,46,0	1/1:22,5:27:76.10:604,76,0	1/1:7,3:10:20.91:148,21,0	1/1:3,8:11:32.30:243,32,0	1/1:11,1:12:30.81:243,31,0	1/1:31,4:35:90.86:799,91,0	1/1:15,1:16:46.10:374,46,0	1/1:11,4:15:33.58:252,34,0	1/1:16,3:19:45.39:392,45,0	1/1:6,7:11:19.26:137,19,0	1/1:12,3:15:43.90:401,44,0	1/1:9,6:15:38.97:270,39,0	1/1:17,3:20:50.15:365,50,0
chr10	20848193	.	T	TA	11873.29	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=8.673;DP=549;FS=2.920;HRun=0;HaplotypeScore=162.0144;InbreedingCoeff=0.9927;MQ=88.40;MQ0=0;MQRankSum=-8.777;QD=24.58;ReadPosRankSum=4.356;VQSLOD=4.9442;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:33,7:40:99:985,102,0	1/1:5,2:6:17.76:161,18,0	0/0:26,0:26:75.16:0,75,971	0/0:20,0:20:60.19:0,60,810	1/1:20,14:33:62.13:590,62,0	1/1:17,6:23:61.94:566,62,0	1/1:15,5:20:55.31:515,55,0	1/1:2,9:11:29.69:244,30,0	1/1:15,2:17:41.43:419,41,0	1/1:15,13:28:80.71:779,81,0	1/1:7,5:12:20.41:173,20,0	1/1:18,4:22:64.22:630,64,0	1/1:13,3:16:43.81:410,44,0	1/1:10,5:15:40.26:325,40,0	0/0:20,0:20:60.17:0,60,804	1/1:13,2:15:41.50:412,42,0	1/1:23,5:28:82.81:783,83,0	1/1:7,3:10:25.51:205,26,0	1/1:10,8:18:50.78:509,51,0	1/1:13,1:14:32.17:304,32,0	1/1:29,4:33:87.21:936,87,0	1/1:15,1:16:41.56:410,42,0	1/1:12,4:16:35.83:370,36,0	1/1:17,3:19:47.96:543,48,0	1/1:6,7:11:20.59:179,21,0	1/1:15,3:18:47.84:535,48,0	1/1:11,6:17:46.45:398,46,0	1/1:17,3:20:53.68:492,54,0
chr10	20851211	.	T	TG	10135.44	PASS	AB=0.640;AC=45;AF=0.804;AN=56;BaseQRankSum=-2.399;DP=656;FS=1.403;HRun=9;HaplotypeScore=91.5655;InbreedingCoeff=0.6658;MQ=85.32;MQ0=0;MQRankSum=-5.904;QD=18.33;ReadPosRankSum=4.186;VQSLOD=5.0625;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:15,19:34:24.67:474,25,0	0/1:4,5:9:33.99:115,0,34	0/0:23,1:24:17.64:0,18,368	0/0:28,0:28:21.57:0,22,352	1/1:9,12:21:20.97:215,21,0	1/1:2,14:17:32.88:345,33,0	1/1:6,19:25:31.11:571,31,0	0/0:28,1:29:41.70:0,42,573	1/1:4,21:25:25.09:505,25,0	1/1:7,11:18:27.07:299,27,0	1/1:1,7:8:17.97:182,18,0	0/1:11,16:27:7.15:381,0,7	1/1:6,20:26:57.15:626,57,0	1/1:7,24:31:31.05:556,31,0	0/0:21,0:22:55.99:0,56,470	1/1:6,29:36:19.88:747,20,0	1/1:9,27:36:34.10:597,34,0	1/1:5,24:29:37.10:627,37,0	1/1:7,8:15:3.97:257,4,0	1/1:9,10:19:30.08:330,30,0	1/1:9,38:48:9.62:963,10,0	1/1:8,17:25:36.01:381,36,0	1/1:6,10:16:21.06:232,21,0	1/1:7,24:31:60.16:664,60,0	1/1:8,15:23:33.09:364,33,0	0/1:6,7:13:2.11:173,0,2	1/1:1,10:11:21.06:232,21,0	1/1:0,10:10:27.07:299,27,0
chr10	20851567	.	GGTGTGT	G	9970.52	PASS	AB=0.588;AC=46;AF=0.821;AN=56;BaseQRankSum=2.834;DP=681;FS=1.976;HRun=0;HaplotypeScore=188.9805;InbreedingCoeff=0.6401;MQ=62.54;MQ0=7;MQRankSum=-3.276;QD=18.19;ReadPosRankSum=4.788;VQSLOD=4.5702;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:18,15:34:33.11:657,33,0	1/1:1,0:6:6.02:84,6,0	0/0:31,0:23:12.38:0,12,110	0/0:35,0:21:12.03:0,12,241	1/1:9,0:18:9.03:124,9,0	1/1:7,8:15:20.95:311,21,0	1/1:13,19:32:48.01:911,48,0	0/0:36,0:36:69.21:0,69,1508	1/1:7,20:26:48.08:915,48,0	1/1:8,0:26:48.63:665,49,0	1/1:2,0:14:15.05:210,15,0	1/1:12,15:27:38.74:634,39,0	1/1:12,14:26:35.81:707,36,0	1/1:9,18:27:51.09:978,51,0	0/0:11,0:29:31.36:0,31,415	1/1:7,2:26:19.82:122,20,0	0/1:15,0:50:13.25:13,0,71	0/1:6,1:20:64.58:65,0,80	1/1:12,0:18:9.46:240,9,0	1/1:6,9:16:2:269,2,0	1/1:22,11:33:14.96:267,15,0	1/1:8,16:24:38.88:550,39,0	1/1:3,8:11:17.64:289,18,0	1/1:7,25:33:33.03:603,33,0	1/1:9,7:15:8.99:145,9,0	1/1:8,11:19:29.78:543,30,0	1/1:4,9:15:30.06:542,30,0	1/1:11,1:13:9.01:125,9,0
chr10	20851599	.	TTTGCAGGC	T	280.98	PASS	AB=0.727;AC=1;AF=0.018;AN=56;BaseQRankSum=-0.021;DP=728;FS=11.985;HRun=0;HaplotypeScore=268.8533;InbreedingCoeff=-0.0223;MQ=52.00;MQ0=10;MQRankSum=-1.007;QD=8.78;ReadPosRankSum=-3.647;VQSLOD=0.7184;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:42:97.42:0,97,2560	0/0:8,0:8:14.65:0,15,362	0/0:41,0:20:42.95:0,43,1372	0/0:55,0:33:87.52:0,88,3206	0/0:13,0:13:14.36:0,14,296	0/0:18,0:18:35.62:0,36,1064	0/0:28,0:28:68.53:0,69,1629	0/1:20,12:32:99:355,0,1688	0/0:34,0:34:73.58:0,74,2238	0/0:34,0:34:64.39:0,64,2194	0/0:16,0:16:24.72:0,25,428	0/0:25,0:25:56.34:0,56,1510	0/0:23,0:23:40.31:0,40,1432	0/0:28,0:28:68.07:0,68,1470	0/0:26,0:26:57.20:0,57,1900	0/0:25,0:25:62.42:0,62,1621	0/0:44,0:44:99:0,117,3206	0/0:24,0:24:65.96:0,66,2086	0/0:20,0:20:52.29:0,52,1353	0/0:18,0:18:34.82:0,35,926	0/0:34,0:34:66.09:0,66,1904	0/0:26,0:26:45.63:0,46,1331	0/0:14,0:14:30.10:0,30,848	0/0:37,0:37:59.69:0,60,1472	0/0:17,0:16:32.14:0,32,1011	0/0:26,0:25:66.23:0,66,1986	0/0:15,0:15:38.99:0,39,814	0/0:5,0:5:7.58:0,8,159
chr10	20860093	.	G	GCGCACACACACACACA	8739.08	PASS	AB=0.845;AC=46;AF=0.821;AN=56;BaseQRankSum=0.067;DP=632;FS=1.626;HRun=0;HaplotypeScore=186.5915;InbreedingCoeff=0.3004;MQ=54.67;MQ0=8;MQRankSum=-5.552;QD=16.43;ReadPosRankSum=-0.317;VQSLOD=3.6915;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:3,1:29:6.02:363,6,0	1/1:8,0:8:10.43:98,10,0	0/0:28,0:13:29.16:0,29,332	0/0:39,0:22:49.89:0,50,615	1/1:15,0:13:11.95:93,12,0	1/1:20,0:19:16.78:145,17,0	1/1:40,0:37:53.37:857,53,0	0/1:24,0:24:99:1033,0,206	1/1:2,15:24:6.30:284,6,0	1/1:1,0:20:44.16:459,44,0	1/1:13,0:13:12.64:80,13,0	1/1:1,0:27:9.24:330,9,0	1/1:0,0:13:3.48:219,3,0	1/1:2,0:18:6.02:317,6,0	0/0:26,0:33:90.06:0,90,2101	0/1:8,0:17:99:132,0,172	0/1:15,0:24:87.67:88,0,159	0/1:16,0:15:91.42:433,0,91	1/1:3,0:17:44.37:437,44,0	1/1:16,0:16:6.49:357,6,0	1/1:41,0:40:30.68:363,31,0	1/1:0,1:19:3.01:177,3,0	1/1:17,0:17:8.97:69,9,0	1/1:3,0:36:3.01:178,3,0	1/1:1,1:19:9:591,9,0	1/1:24,0:22:59.30:1259,59,0	1/1:0,14:23:2.84:238,3,0	1/1:0,0:7:3.01:138,3,0
chr10	20864722	.	A	ATTT	14022.08	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=9.389;DP=831;FS=2.891;HRun=8;HaplotypeScore=202.6503;InbreedingCoeff=0.9997;MQ=77.25;MQ0=0;MQRankSum=-6.660;QD=18.72;ReadPosRankSum=3.308;VQSLOD=1.0103;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,0:53:99:847,111,0	1/1:3,0:13:29.89:230,30,0	0/0:24,0:23:50.70:0,51,620	0/0:17,0:17:33.08:0,33,434	1/1:7,0:38:95.57:755,96,0	1/1:3,1:23:56.80:473,57,0	1/1:4,1:25:68.57:550,69,0	1/1:20,1:50:96.94:804,97,0	1/1:4,0:29:65.68:496,66,0	1/1:5,1:38:95.67:775,96,0	1/1:4,0:26:62.70:473,63,0	1/1:3,0:27:68.72:526,69,0	1/1:8,0:31:62.52:472,63,0	1/1:3,0:33:77.71:599,78,0	0/0:41,0:41:99:0,111,1458	1/1:2,0:32:83.68:644,84,0	1/1:4,0:26:56.78:437,57,0	1/1:2,0:18:37.11:278,37,0	1/1:4,0:22:56.82:462,57,0	1/1:6,1:35:86.67:713,87,0	1/1:3,0:34:74.69:571,75,0	1/1:2,0:29:77.68:595,78,0	1/1:2,0:28:67.30:510,67,0	1/1:3,0:32:78.93:597,79,0	1/1:3,0:22:50.81:391,51,0	1/1:4,2:31:80.75:702,81,0	1/1:5,0:31:68.71:524,69,0	1/1:0,3:23:64.07:598,64,0
chr10	20864880	.	TC	T	23208.94	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=0.712;DP=742;FS=1.391;HRun=2;HaplotypeScore=74.4463;InbreedingCoeff=0.9936;MQ=86.20;MQ0=0;MQRankSum=-9.391;QD=35.49;ReadPosRankSum=4.852;VQSLOD=5.2661;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,40:40:99:1324,102,0	1/1:0,5:5:15.05:195,15,0	0/0:32,0:32:89.60:0,90,1258	0/0:17,0:17:47.83:0,48,658	1/1:0,26:26:69.16:874,69,0	1/1:0,15:15:39.13:506,39,0	1/1:1,28:29:75.24:974,75,0	1/1:0,33:33:99:1258,99,0	1/1:0,33:33:93.20:1183,93,0	1/1:0,28:28:84.27:1090,84,0	1/1:1,21:22:60.20:779,60,0	1/1:0,21:21:57.19:740,57,0	1/1:1,26:27:70.64:932,71,0	1/1:1,25:26:66.21:857,66,0	0/0:39,0:39:99:0,111,1618	1/1:0,48:48:99:1636,126,0	1/1:0,34:34:90.29:1168,90,0	1/1:1,26:27:78.25:1011,78,0	1/1:1,30:31:90.25:1125,90,0	1/1:0,21:21:60.14:759,60,0	1/1:0,46:46:99:1558,120,0	1/1:0,22:22:63.20:818,63,0	1/1:0,22:22:66.21:857,66,0	1/1:0,28:28:78.25:1013,78,0	1/1:0,17:17:48.16:623,48,0	1/1:0,24:24:72.22:920,72,0	1/1:0,20:20:54.17:700,54,0	1/1:0,9:9:24.08:311,24,0
chr10	20866531	.	TGC	T	1200.74	PASS	AB=0.879;AC=20;AF=0.714;AN=28;BaseQRankSum=0.805;DP=208;FS=7.016;HRun=0;HaplotypeScore=57.0965;InbreedingCoeff=0.2988;MQ=49.21;MQ0=22;MQRankSum=-0.049;QD=8.28;ReadPosRankSum=1.068;VQSLOD=1.7741;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	1/1:0,5:4:3.01:36,3,0	0/0:17,0:3:6.77:0,7,48	0/1:44,0:12:1.76:2,0,100	./.	./.	1/1:3,1:3:2.04:6,2,0	0/1:30,1:28:99:191,0,170	1/1:1,0:1:0.89:2,1,0	1/1:1,21:18:47.94:622,48,0	0/1:2,10:11:0:0,0,0	./.	./.	./.	0/0:11,0:11:3.05:0,3,284	./.	1/1:2,0:2:2.69:8,3,0	1/1:3,1:4:6.40:48,6,0	1/1:5,8:11:29.30:345,29,0	./.	0/1:6,0:5:0:0,0,0	./.	./.	./.	./.	1/1:0,1:1:3.01:39,3,0	./.	./.
chr10	20866601	.	CCT	C	248.65	PASS	AB=0.978;AC=23;AF=0.523;AN=44;BaseQRankSum=1.581;DP=220;FS=19.444;HRun=0;HaplotypeScore=32.3341;InbreedingCoeff=0.2048;MQ=29.27;MQ0=52;MQRankSum=-1.840;QD=2.09;ReadPosRankSum=0.936;VQSLOD=-0.2335;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:8,0:8:6.07:28,6,0	1/1:3,0:3:2.84:14,3,0	./.	0/0:25,0:6:4.68:0,5,16	./.	1/1:6,0:5:5.62:29,6,0	1/1:12,0:5:0.15:1,0,0	./.	0/0:8,0:4:3.01:0,3,38	0/1:16,1:15:2.82:94,0,3	0/0:3,0:3:0:0,0,0	./.	0/0:5,0:4:0.47:0,0,1	0/1:7,0:5:0:0,0,0	0/0:11,0:9:18.06:0,18,291	1/1:4,0:4:2.90:16,3,0	1/1:8,1:7:2.81:15,3,0	0/1:5,1:5:11.17:41,0,11	0/1:12,0:6:8.53:9,0,43	0/1:4,0:3:0:0,0,0	./.	0/1:1,0:1:0:0,0,0	0/0:2,0:2:0:0,0,0	0/1:10,0:6:0.09:0,0,0	0/1:5,0:4:0:0,0,0	0/1:11,0:11:53.09:53,0,72	1/1:3,1:3:8.85:56,9,0	./.
chr10	20867128	.	T	TTTTTTTC	2132.30	PASS	AB=0.964;AC=3;AF=0.054;AN=56;BaseQRankSum=-3.542;DP=537;FS=11.293;HRun=0;HaplotypeScore=152.4549;InbreedingCoeff=0.6433;MQ=73.58;MQ0=1;MQRankSum=-5.174;QD=38.08;ReadPosRankSum=-3.363;VQSLOD=2.1537;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,114,2553	0/0:9,0:9:24.08:0,24,568	0/0:18,0:13:26.97:0,27,353	0/1:26,0:22:32.37:32,0,526	0/0:20,0:20:57.17:0,57,1168	0/0:21,0:21:54.17:0,54,1235	0/0:21,0:20:54.17:0,54,1232	1/1:8,21:29:75.25:2206,75,0	0/0:7,0:7:21.06:0,21,454	0/0:26,0:26:69.19:0,69,1396	0/0:20,0:20:54.17:0,54,1204	0/0:13,0:13:29.44:0,29,538	0/0:14,0:14:36.08:0,36,691	0/0:19,0:19:54.11:0,54,1008	0/0:15,0:14:33.09:0,33,695	0/0:18,0:18:48.16:0,48,1131	0/0:24,0:24:66.20:0,66,1436	0/0:20,0:20:57.18:0,57,1231	0/0:22,0:22:63.16:0,63,1219	0/0:10,0:10:27.04:0,27,542	0/0:14,0:14:33.08:0,33,648	0/0:18,0:18:54.16:0,54,1101	0/0:17,0:17:44.65:0,45,919	0/0:18,0:18:42.10:0,42,902	0/0:20,0:20:39.11:0,39,847	0/0:21,0:21:57.15:0,57,1153	0/0:24,0:24:63.17:0,63,1316	0/0:12,0:12:30.09:0,30,659
chr10	20867144	.	CT	C	9165.32	PASS	AB=1.000;AC=50;AF=0.893;AN=56;BaseQRankSum=-3.555;DP=529;FS=0.000;HRun=10;HaplotypeScore=63.6909;InbreedingCoeff=0.6334;MQ=67.69;MQ0=2;MQRankSum=2.026;QD=18.98;ReadPosRankSum=6.611;VQSLOD=4.8768;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,37:40:99:912,105,0	1/1:1,8:9:23.99:208,24,0	0/1:20,0:14:10.25:10,0,173	0/1:23,0:21:35.34:35,0,95	1/1:1,19:20:50.98:442,51,0	1/1:1,21:22:59.99:521,60,0	1/1:3,19:22:53.97:469,54,0	0/0:29,0:29:56.58:0,57,482	1/1:1,6:7:15:130,15,0	1/1:3,17:20:44.96:388,45,0	1/1:4,17:21:50.94:436,51,0	1/1:3,10:13:29.98:258,30,0	1/1:3,13:16:32.99:286,33,0	1/1:1,16:17:47.99:416,48,0	0/0:17,0:16:48.11:0,48,522	1/1:3,15:18:41.88:364,42,0	1/1:4,24:28:62.97:547,63,0	1/1:5,14:19:41.98:365,42,0	1/1:1,17:18:50.96:438,51,0	1/1:3,7:10:20.99:182,21,0	1/1:0,12:12:29.99:260,30,0	1/1:4,14:18:41.98:364,42,0	1/1:3,14:17:38.78:338,39,0	1/1:1,13:14:35.99:313,36,0	1/1:1,18:19:41.99:365,42,0	1/1:4,21:26:64.98:544,65,0	1/1:1,20:21:53.99:469,54,0	1/1:6,4:10:11.99:104,12,0
chr10	20867302	.	AG	A	10937.49	PASS	AB=1.000;AC=51;AF=0.911;AN=56;BaseQRankSum=0.982;DP=511;FS=7.020;HRun=8;HaplotypeScore=54.9261;InbreedingCoeff=0.8298;MQ=82.95;MQ0=0;MQRankSum=-3.632;QD=23.57;ReadPosRankSum=3.572;VQSLOD=5.4861;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,38:44:99:1099,114,0	1/1:1,7:8:17.86:174,18,0	0/0:29,0:29:33.90:0,34,578	0/1:15,0:15:5.27:5,0,199	1/1:3,10:13:24.03:232,24,0	1/1:1,20:21:60.10:579,60,0	1/1:2,30:32:78.12:753,78,0	1/1:4,14:18:35.97:334,36,0	1/1:0,10:10:30.05:289,30,0	1/1:2,11:13:33.05:319,33,0	1/1:0,9:9:21.03:203,21,0	1/1:1,20:21:57.09:551,57,0	1/1:2,8:10:24.03:232,24,0	1/1:2,13:15:36.06:348,36,0	0/0:18,0:18:54.16:0,54,642	1/1:2,13:15:33.05:319,33,0	1/1:3,27:30:78.12:753,78,0	1/1:2,19:21:51.08:492,51,0	1/1:6,20:26:57.08:550,57,0	1/1:1,11:12:30.05:290,30,0	1/1:1,25:26:72.12:695,72,0	1/1:0,9:9:27.04:261,27,0	1/1:1,10:11:30.05:290,30,0	1/1:0,25:25:72.12:695,72,0	1/1:0,11:11:27.04:261,27,0	1/1:3,17:20:54.08:520,54,0	1/1:3,14:17:42.07:405,42,0	1/1:0,12:12:30.05:290,30,0
chr10	20867649	.	C	CT	263.88	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-0.984;DP=560;FS=0.954;HRun=8;HaplotypeScore=60.3217;InbreedingCoeff=0.9379;MQ=72.06;MQ0=2;MQRankSum=1.343;QD=12.57;ReadPosRankSum=-3.296;VQSLOD=2.2935;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:96.04:0,96,875	0/0:8,0:8:23.23:0,23,199	0/0:26,0:20:22.46:0,22,286	0/0:20,0:13:9.43:0,9,131	0/0:13,0:13:30.02:0,30,274	0/0:25,0:25:66:0,66,593	0/0:20,0:20:47.98:0,48,430	1/1:9,12:19:33.06:358,33,0	0/0:22,0:22:57.02:0,57,521	0/0:23,0:23:63.02:0,63,574	0/0:14,0:14:39.01:0,39,357	0/0:27,0:27:46.60:0,47,606	0/0:20,0:20:50.99:0,51,462	0/0:16,0:16:39.01:0,39,357	0/0:19,0:19:48.02:0,48,439	0/0:15,0:15:39:0,39,352	0/0:36,0:36:88.42:0,88,893	0/0:28,0:28:84.02:0,84,762	0/0:26,0:26:68.82:0,69,611	0/0:17,0:17:46.83:0,47,417	0/0:21,0:21:51:0,51,461	0/0:17,0:17:47.99:0,48,429	0/0:11,0:11:21.01:0,21,192	0/0:21,0:21:57.03:0,57,522	0/0:12,0:12:33.89:0,34,297	0/0:22,0:21:63.03:0,63,576	0/0:17,0:17:39.01:0,39,357	0/0:9,0:9:24.01:0,24,220
chr10	20869642	.	T	TGGA	15855.28	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=2.481;DP=474;FS=0.610;HRun=0;HaplotypeScore=149.4163;InbreedingCoeff=0.9635;MQ=65.98;MQ0=0;MQRankSum=-9.545;QD=38.02;ReadPosRankSum=2.801;VQSLOD=5.8695;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:24:48.13:913,48,0	1/1:7,0:7:15.05:312,15,0	0/0:15,0:15:35.19:0,35,302	0/0:16,0:16:24.36:0,24,354	1/1:21,0:21:36.09:714,36,0	1/1:28,0:27:60.19:1208,60,0	1/1:13,0:13:32.90:516,33,0	1/1:7,0:7:20.98:175,21,0	1/1:15,0:15:39.13:813,39,0	1/1:19,0:18:42.06:669,42,0	1/1:13,0:13:23.91:396,24,0	1/1:16,0:16:33.11:610,33,0	1/1:11,0:11:26.93:435,27,0	1/1:26,0:26:60.19:1184,60,0	0/0:25,0:25:54.11:0,54,722	1/1:22,0:22:57.16:1050,57,0	1/1:19,0:19:45:774,45,0	1/1:10,0:9:21.01:371,21,0	1/1:22,0:21:35.88:434,36,0	1/1:8,0:8:9.01:150,9,0	1/1:14,9:23:27.09:551,27,0	1/1:14,2:16:33.11:693,33,0	1/1:12,0:12:20.90:338,21,0	1/1:15,0:15:23.16:463,23,0	1/1:16,0:16:30.10:631,30,0	1/1:25,0:25:60:985,60,0	1/1:23,0:23:57.18:1141,57,0	1/1:6,0:6:17.99:331,18,0
chr10	20869643	.	G	GGA	10016.18	PASS	AB=1.000;AC=48;AF=0.857;AN=56;BaseQRankSum=2.246;DP=463;FS=8.086;HRun=0;HaplotypeScore=160.6299;InbreedingCoeff=0.7089;MQ=64.75;MQ0=0;MQRankSum=-9.907;QD=24.55;ReadPosRankSum=7.128;VQSLOD=4.7867;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:23:20.06:622,20,0	0/1:7,0:7:5.10:170,0,5	0/0:13,0:13:13.19:0,13,234	0/0:17,0:16:25.83:0,26,335	1/1:17,0:17:36.06:422,36,0	1/1:27,0:26:29.89:737,30,0	1/1:14,0:14:17.52:324,18,0	1/1:9,0:9:21.02:305,21,0	1/1:16,0:16:24.80:461,25,0	1/1:18,0:17:41.99:438,42,0	0/1:12,0:12:6.08:245,0,6	1/1:16,0:16:32.28:361,32,0	1/1:10,0:10:12.61:261,13,0	1/1:25,0:25:30.74:713,31,0	0/0:25,0:25:63.10:0,63,747	1/1:22,0:22:56.37:681,56,0	1/1:19,0:19:30.05:487,30,0	1/1:11,0:10:20.99:254,21,0	1/1:19,0:18:10.09:262,10,0	1/1:6,0:6:9.01:100,9,0	1/1:23,0:23:30.08:363,30,0	1/1:15,0:15:17.39:370,17,0	1/1:11,0:11:20.87:224,21,0	1/1:16,0:16:23.83:310,24,0	1/1:12,5:17:33.10:406,33,0	1/1:24,0:24:22.69:582,23,0	1/1:25,0:25:56.30:704,56,0	1/1:6,0:6:17.99:214,18,0
chr10	20869644	.	G	GA	6287.15	PASS	AB=0.681;AC=46;AF=0.821;AN=56;BaseQRankSum=3.781;DP=468;FS=6.240;HRun=0;HaplotypeScore=171.1089;InbreedingCoeff=0.4499;MQ=64.18;MQ0=0;MQRankSum=-10.233;QD=15.22;ReadPosRankSum=8.562;VQSLOD=5.2854;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:11,14:25:8.20:366,8,0	0/1:3,4:7:22.03:98,0,22	0/0:13,0:13:13.49:0,13,223	0/0:16,0:15:31.13:0,31,350	1/1:6,10:16:35.78:269,36,0	1/1:3,24:26:19.88:438,20,0	0/1:8,7:15:0.31:206,0,0	1/1:4,5:9:20.94:186,21,0	1/1:4,13:17:16.85:273,17,0	1/1:12,8:19:40.67:308,41,0	0/1:5,6:11:15.69:171,0,16	1/1:2,13:15:23.68:226,24,0	1/1:4,6:10:4.07:169,4,0	1/1:5,20:25:14.08:429,14,0	0/0:26,0:26:69.10:0,69,759	1/1:6,16:22:49.05:437,49,0	1/1:9,11:20:22.67:327,23,0	1/1:8,3:10:6.56:167,7,0	0/1:13,6:18:51.80:160,0,52	1/1:5,2:7:8.92:72,9,0	1/1:11,10:21:29.67:221,30,0	1/1:5,9:14:13.02:211,13,0	1/1:7,4:11:4.36:122,4,0	1/1:4,12:16:23.92:208,24,0	1/1:7,10:17:32.71:240,33,0	1/1:12,14:26:10.14:385,10,0	1/1:7,19:26:56.34:454,56,0	1/1:1,5:6:17.92:144,18,0
chr10	20869652	.	G	GGA	10803.35	PASS	AB=1.000;AC=51;AF=0.911;AN=56;BaseQRankSum=4.450;DP=427;FS=2.400;HRun=0;HaplotypeScore=143.3957;InbreedingCoeff=0.6984;MQ=56.47;MQ0=0;MQRankSum=-7.471;QD=27.14;ReadPosRankSum=2.232;VQSLOD=5.9590;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,13:29:62.52:696,63,0	1/1:4,4:8:23.63:228,24,0	0/0:8,0:9:4.51:0,5,158	0/1:10,0:9:13.78:14,0,209	1/1:4,10:14:30.07:371,30,0	1/1:4,19:23:66.08:833,66,0	1/1:6,7:13:33:368,33,0	1/1:12,0:17:45:507,45,0	1/1:1,13:19:42.12:527,42,0	1/1:7,8:15:41.92:437,42,0	1/1:3,6:9:20.90:213,21,0	1/1:3,7:11:32.93:359,33,0	1/1:2,6:8:21.05:256,21,0	1/1:8,16:25:72.07:828,72,0	0/0:20,0:20:56.99:0,57,626	1/1:5,15:21:56.97:688,57,0	1/1:9,11:20:50.85:545,51,0	1/1:7,3:10:23.81:220,24,0	1/1:10,5:16:44.91:442,45,0	1/1:3,2:5:11.96:122,12,0	1/1:13,10:23:32.73:353,33,0	1/1:6,8:14:41.61:433,42,0	1/1:4,4:8:23.35:187,23,0	1/1:6,5:11:21.28:211,21,0	1/1:5,10:15:35.98:398,36,0	1/1:7,13:20:56.92:613,57,0	1/1:1,18:26:57.18:751,57,0	1/1:0,5:5:15.05:205,15,0
chr10	20869752	.	GGAGAT	G	18286.45	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=8.191;DP=418;FS=7.601;HRun=0;HaplotypeScore=124.9087;InbreedingCoeff=0.9867;MQ=75.02;MQ0=0;MQRankSum=-12.430;QD=52.40;ReadPosRankSum=3.399;VQSLOD=5.0697;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,17:22:33.11:699,33,0	1/1:0,10:10:24.08:535,24,0	0/0:20,0:20:54.19:0,54,1548	0/0:22,0:22:63.22:0,63,1798	1/1:1,10:11:18.06:389,18,0	1/1:0,10:9:27.09:602,27,0	1/1:3,16:19:36.12:801,36,0	1/1:1,12:13:33.11:701,33,0	1/1:1,16:17:42.14:936,42,0	1/1:1,12:13:33.11:736,33,0	1/1:0,6:6:18.06:401,18,0	1/1:0,16:16:45.15:1003,45,0	1/1:1,18:19:45.15:984,45,0	1/1:1,13:14:36.12:802,36,0	0/0:27,0:27:81.28:0,81,2494	1/1:1,19:20:51.18:1137,51,0	1/1:3,12:15:33.11:726,33,0	1/1:1,10:11:29.97:617,30,0	1/1:0,16:16:48.15:1004,48,0	1/1:0,13:13:33.11:735,33,0	1/1:2,12:14:24.08:522,24,0	1/1:0,13:13:39.13:865,39,0	1/1:0,9:9:18.06:401,18,0	1/1:1,10:11:21.07:453,21,0	1/1:1,15:16:35.89:743,36,0	1/1:0,16:16:48.14:1026,48,0	1/1:3,14:17:42.14:936,42,0	1/1:0,8:8:24.08:535,24,0
chr10	20869868	.	AG	A	16627.09	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=5.786;DP=601;FS=1.673;HRun=3;HaplotypeScore=97.6331;InbreedingCoeff=0.9981;MQ=70.24;MQ0=0;MQRankSum=-8.273;QD=31.25;ReadPosRankSum=3.260;VQSLOD=4.8450;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,30:31:75.24:929,75,0	1/1:0,12:12:33.10:409,33,0	0/0:21,0:18:54.16:0,54,740	0/0:23,0:22:51.01:0,51,680	1/1:0,30:30:78.25:966,78,0	1/1:0,14:13:36.03:411,36,0	1/1:1,22:23:51.16:632,51,0	1/1:1,27:28:81.20:972,81,0	1/1:1,21:22:54.09:635,54,0	1/1:1,27:28:78.23:954,78,0	1/1:1,21:22:60.19:744,60,0	1/1:1,10:11:21.07:260,21,0	1/1:0,14:14:30.05:354,30,0	1/1:0,19:19:45.06:523,45,0	0/0:25,0:25:75.24:0,75,1061	1/1:0,17:17:42.13:520,42,0	1/1:1,18:19:51.12:614,51,0	1/1:0,28:26:72.18:875,72,0	1/1:0,20:20:60.17:729,60,0	1/1:2,25:27:69.11:816,69,0	1/1:1,17:18:41.92:434,42,0	1/1:0,23:23:63.20:781,63,0	1/1:1,26:27:75.19:911,75,0	1/1:1,20:21:45.06:538,45,0	1/1:0,24:24:63.20:781,63,0	1/1:1,20:21:60.19:743,60,0	1/1:1,21:22:57.14:688,57,0	1/1:0,11:11:33.10:409,33,0
chr10	20870054	.	T	TACAC	5553.47	PASS	AB=1.000;AC=36;AF=0.783;AN=46;BaseQRankSum=0.223;DP=540;FS=6.230;HRun=0;HaplotypeScore=129.6611;InbreedingCoeff=0.3770;MQ=55.26;MQ0=19;MQRankSum=0.610;QD=12.45;ReadPosRankSum=0.325;VQSLOD=3.6928;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:49,0:48:35.64:446,36,0	0/1:8,0:8:13.73:14,0,90	./.	./.	0/0:8,0:8:2.73:0,3,35	1/1:19,0:16:20.70:303,21,0	1/1:24,0:24:21.02:295,21,0	0/1:28,0:25:0:0,0,0	1/1:16,0:16:21.04:332,21,0	1/1:10,0:10:5.47:49,5,0	0/0:7,0:7:3.01:0,3,36	1/1:14,7:24:6:76,6,0	1/1:14,0:14:18.01:221,18,0	1/1:23,0:23:30.05:437,30,0	0/0:26,0:28:22.19:0,22,382	1/1:22,0:22:30.10:580,30,0	1/1:21,0:21:20.70:247,21,0	1/1:30,0:28:38.99:566,39,0	0/1:16,0:16:77.21:77,0,83	./.	0/1:38,0:37:13.70:469,0,14	./.	./.	1/1:38,0:38:39.06:630,39,0	1/1:14,0:14:2.67:68,3,0	1/1:20,0:17:15.04:210,15,0	1/1:21,0:21:21.07:418,21,0	1/1:9,0:9:6.02:116,6,0
chr10	20870092	.	CAA	C	3448.71	PASS	AB=0.968;AC=34;AF=0.607;AN=56;BaseQRankSum=-6.071;DP=540;FS=2.617;HRun=3;HaplotypeScore=110.5956;InbreedingCoeff=0.1452;MQ=60.03;MQ0=6;MQRankSum=1.589;QD=7.78;ReadPosRankSum=-0.108;VQSLOD=0.2196;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:46,0:45:47.03:203,0,47	0/1:8,0:8:26.97:27,0,56	0/0:18,0:14:35.11:0,35,343	0/0:16,0:9:26.89:0,27,236	0/1:9,0:9:12.13:36,0,12	0/1:19,0:17:9.53:76,0,10	1/1:24,0:24:27.25:286,27,0	0/0:28,0:28:68.97:0,69,644	1/1:22,0:21:10.48:190,10,0	1/1:16,0:16:20.74:232,21,0	0/1:8,0:7:12.06:34,0,12	1/1:25,0:25:11:222,11,0	1/1:21,0:21:29.96:232,30,0	0/1:18,0:18:1.55:80,0,2	0/0:22,0:22:47.86:0,48,720	0/1:23,0:23:8.78:199,0,9	0/1:19,0:19:8.91:113,0,9	1/1:27,1:27:9.79:220,10,0	0/1:20,0:19:52.82:239,0,53	1/1:6,0:6:8.98:73,9,0	0/1:38,1:38:0.16:304,0,0	0/1:3,4:6:0:0,0,0	1/1:4,0:4:2.99:24,3,0	1/1:38,0:38:17.26:266,17,0	0/0:13,0:13:4.54:0,5,16	1/1:21,0:19:0.68:202,1,0	1/1:18,0:17:5.26:177,5,0	0/1:4,0:4:3.35:14,0,3
chr10	20870094	.	A	ACAC	2029.74	PASS	AB=0.923;AC=19;AF=0.339;AN=56;BaseQRankSum=10.099;DP=497;FS=4.328;HRun=0;HaplotypeScore=119.9965;InbreedingCoeff=-0.3334;MQ=63.32;MQ0=4;MQRankSum=2.367;QD=5.52;ReadPosRankSum=-2.152;VQSLOD=2.4081;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:34,0:34:99:131,0,122	0/0:8,0:8:17.53:0,18,132	0/0:19,0:15:42.12:0,42,673	0/0:15,0:9:27.02:0,27,458	0/0:9,0:9:8.56:0,9,57	0/1:16,1:16:39.41:117,0,39	0/1:21,1:22:97.72:106,0,98	0/0:24,0:24:69.20:0,69,1229	0/1:18,3:20:53.96:184,0,54	0/0:16,0:16:20.51:0,21,191	0/0:7,0:6:8.76:0,9,59	0/1:21,1:23:17.26:17,0,112	0/1:20,0:20:67.85:68,0,83	0/1:16,2:18:2.18:208,0,2	0/0:22,0:22:60.01:0,60,979	0/1:17,5:22:69.37:283,0,69	0/1:14,1:16:68.44:87,0,68	0/1:25,1:25:99:161,0,207	0/1:20,0:19:0.28:0,0,182	0/1:6,0:6:15.31:15,0,19	0/1:37,0:38:99:136,0,194	0/0:4,1:5:0:0,0,0	0/0:4,0:4:2.84:0,3,14	0/1:28,4:35:81.60:301,0,82	1/1:10,2:12:3.01:39,3,0	0/1:17,0:16:39.54:40,0,84	0/1:15,2:16:49.23:239,0,49	0/1:2,1:3:9.28:52,0,9
chr10	20870381	.	T	TAA	9693.70	PASS	AC=48;AF=0.889;AN=54;BaseQRankSum=7.982;DP=317;FS=4.586;HRun=6;HaplotypeScore=100.9295;InbreedingCoeff=0.8568;MQ=62.53;MQ0=1;MQRankSum=-8.203;QD=35.77;ReadPosRankSum=1.593;VQSLOD=4.3528;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,12:16:39.05:597,39,0	1/1:4,3:6:9.03:152,9,0	0/0:11,0:9:24.07:0,24,293	0/0:16,0:14:30.06:0,30,348	1/1:1,9:10:27.09:422,27,0	1/1:3,8:11:21.03:324,21,0	1/1:3,6:9:15.05:242,15,0	1/1:6,6:11:27.09:447,27,0	1/1:4,10:14:33.11:557,33,0	1/1:4,18:21:54.14:880,54,0	1/1:3,9:12:21.07:341,21,0	1/1:2,9:11:30.10:507,30,0	1/1:3,10:13:30.10:507,30,0	1/1:1,12:13:36.12:608,36,0	0/0:17,0:17:51.15:0,51,610	1/1:5,8:12:24.08:405,24,0	1/1:3,9:11:30.10:507,30,0	1/1:3,5:9:5.91:242,6,0	1/1:8,12:21:32.60:516,33,0	1/1:2,4:6:12.04:203,12,0	./.	1/1:5,7:11:21.03:313,21,0	1/1:2,1:3:3.01:51,3,0	1/1:3,8:11:27.09:456,27,0	1/1:2,6:8:18.06:302,18,0	1/1:1,12:13:36.12:608,36,0	1/1:2,5:7:15.05:253,15,0	1/1:1,5:6:15.05:253,15,0
chr10	20870486	.	AGT	A	217.22	PASS	AB=0.980;AC=21;AF=0.375;AN=56;BaseQRankSum=3.690;DP=196;FS=40.462;HRun=0;HaplotypeScore=45.9448;InbreedingCoeff=-0.0750;MQ=55.35;MQ0=2;MQRankSum=-0.475;QD=1.80;ReadPosRankSum=2.562;VQSLOD=0.3423;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:12,0:12:2.39:2,0,4	0/0:3,0:3:3.44:0,3,17	0/0:10,0:5:9.02:0,9,102	0/0:14,0:7:11.71:0,12,141	0/0:6,1:7:5.28:0,5,34	0/0:7,0:7:2.47:0,2,36	0/1:5,0:5:8.12:26,0,8	0/0:14,0:14:15.68:0,16,111	1/1:4,0:4:10.22:86,10,0	0/1:11,0:10:14.90:20,0,15	1/1:5,0:5:6.13:17,6,0	0/0:2,0:2:2.31:0,2,20	1/1:6,0:6:2.52:52,3,0	1/1:4,0:4:2.37:13,2,0	0/0:5,0:5:12.02:0,12,192	0/1:8,1:9:45.94:47,0,46	0/1:9,1:10:27.21:27,0,88	0/0:5,0:5:3.17:0,3,37	0/1:11,0:10:10.42:10,0,47	0/1:6,0:6:0:0,0,12	0/0:5,1:6:0.50:0,0,20	0/1:4,0:4:6.26:6,0,18	0/1:4,0:4:8.94:9,0,15	0/1:4,0:4:0.96:1,0,12	0/1:6,0:6:14.45:14,0,19	0/1:12,1:13:26.18:26,0,48	0/0:2,0:2:5.84:0,6,39	0/1:7,0:7:3.96:4,0,34
chr10	20870522	.	TA	T	5997.76	PASS	AB=0.923;AC=49;AF=0.875;AN=56;BaseQRankSum=3.512;DP=299;FS=1.234;HRun=8;HaplotypeScore=42.9561;InbreedingCoeff=0.8388;MQ=67.74;MQ0=0;MQRankSum=-3.934;QD=23.61;ReadPosRankSum=5.177;VQSLOD=4.8267;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,15:15:42.07:405,42,0	1/1:0,8:8:21.03:202,21,0	0/1:11,1:12:2.01:2,0,223	0/0:6,0:6:15:0,15,164	1/1:0,16:16:42.03:397,42,0	1/1:1,5:6:11.98:107,12,0	1/1:0,10:10:24.04:232,24,0	0/0:27,0:27:78.22:0,78,926	1/1:2,4:6:15.02:145,15,0	1/1:2,19:21:54.08:521,54,0	1/1:3,10:13:26.90:246,27,0	1/1:0,7:7:21.03:203,21,0	1/1:0,7:7:21.03:203,21,0	1/1:0,11:12:35.09:325,35,0	0/0:12,0:12:36.11:0,36,435	1/1:1,13:14:36.06:348,36,0	1/1:2,10:12:27.04:260,27,0	1/1:0,8:8:24.04:232,24,0	1/1:1,6:7:15.02:145,15,0	1/1:0,13:13:39.06:376,39,0	1/1:0,11:11:30.05:289,30,0	1/1:0,2:2:6.01:58,6,0	1/1:0,8:8:21.03:203,21,0	1/1:1,6:7:15.02:145,15,0	1/1:2,8:10:21.03:203,21,0	1/1:2,12:14:36.06:348,36,0	1/1:0,5:5:15.02:145,15,0	1/1:0,10:10:27.04:261,27,0
chr10	20870954	.	TA	T	18485.70	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=7.850;DP=692;FS=5.828;HRun=2;HaplotypeScore=155.4458;InbreedingCoeff=0.9967;MQ=85.71;MQ0=0;MQRankSum=-6.479;QD=32.89;ReadPosRankSum=6.208;VQSLOD=3.8081;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,30:30:60.20:778,60,0	1/1:0,10:10:27.09:348,27,0	0/0:25,0:25:68.66:0,69,915	0/0:23,0:23:63.13:0,63,862	1/1:0,17:17:42.14:539,42,0	1/1:0,20:20:54.13:681,54,0	1/1:0,24:24:69.22:895,69,0	0/0:32,0:32:58.44:0,58,439	1/1:1,33:34:90.29:1158,90,0	1/1:1,23:24:66.14:816,66,0	1/1:0,10:10:27.09:349,27,0	1/1:1,30:31:75.21:973,75,0	1/1:0,31:31:77.92:1010,78,0	1/1:0,32:32:90.29:1165,90,0	0/0:50,0:50:99:0,147,2180	1/1:1,34:35:84.27:1090,84,0	1/1:1,17:18:48.16:623,48,0	1/1:0,16:16:48.16:618,48,0	1/1:2,24:26:74.96:923,75,0	1/1:1,16:17:45.15:584,45,0	1/1:1,36:37:90.29:1167,90,0	1/1:2,18:20:48.15:609,48,0	1/1:0,13:13:17.18:232,17,0	1/1:0,24:24:60.20:778,60,0	1/1:2,18:20:51.17:660,51,0	1/1:0,29:29:83.32:983,83,0	1/1:2,25:27:69.22:893,69,0	1/1:1,16:17:48.15:615,48,0
chr10	20871491	.	AGTGTGTGTGTGTGTGT	A	10778.45	PASS	AB=0.807;AC=36;AF=0.643;AN=56;BaseQRankSum=5.381;DP=551;FS=2.644;HRun=0;HaplotypeScore=247.5479;InbreedingCoeff=0.5860;MQ=63.65;MQ0=10;MQRankSum=-4.716;QD=29.13;ReadPosRankSum=2.129;VQSLOD=3.4252;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:18,6:23:4.05:753,4,0	0/0:8,0:14:20.54:0,21,338	0/0:27,0:23:8.06:0,8,183	0/0:26,0:19:9.03:0,9,288	0/0:17,0:27:29.94:0,30,649	1/1:12,5:18:15.05:639,15,0	1/1:14,3:17:6.02:264,6,0	0/0:23,0:23:17.52:0,18,407	1/1:8,0:9:3.01:72,3,0	0/0:26,0:34:56.68:0,57,1468	0/1:11,0:19:2.07:2,0,628	1/1:7,5:12:12.04:527,12,0	1/1:4,6:11:18.06:690,18,0	1/1:9,8:17:12.04:526,12,0	0/0:18,0:18:48.13:0,48,2719	1/1:9,1:26:42.14:1103,42,0	0/1:11,0:13:18.93:66,0,19	0/1:14,3:20:68.14:508,0,68	0/0:10,0:12:13.60:0,14,270	1/1:13,8:21:24.08:1054,24,0	0/1:21,3:22:99:126,0,136	1/1:11,5:16:9.03:395,9,0	1/1:9,8:17:9.03:373,9,0	1/1:21,4:25:6.02:239,6,0	1/1:13,13:26:30.10:1297,30,0	1/1:13,12:25:36.09:1243,36,0	1/1:17,5:23:12.04:507,12,0	1/1:2,4:6:9.03:395,9,0
chr10	20872091	.	T	TG	1225.70	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-8.945;DP=725;FS=7.504;HRun=0;HaplotypeScore=68.4042;InbreedingCoeff=0.9999;MQ=88.01;MQ0=0;MQRankSum=-3.278;QD=39.54;ReadPosRankSum=-3.038;VQSLOD=2.5954;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,111,1532	0/0:14,0:14:42.14:0,42,587	0/0:29,0:29:81.14:0,81,1026	0/0:27,0:27:74.31:0,74,962	0/0:20,0:20:60.17:0,60,805	0/0:22,0:22:66.22:0,66,922	0/0:27,0:27:81.23:0,81,1081	1/1:3,28:31:84.27:1321,84,0	0/0:25,0:25:75.25:0,75,1049	0/0:29,0:29:87.28:0,87,1203	0/0:21,0:21:60.20:0,60,839	0/0:32,0:32:96.27:0,96,1287	0/0:30,0:30:90.29:0,90,1238	0/0:24,0:24:69.23:0,69,962	0/0:40,0:40:99:0,120,1643	0/0:28,0:28:81.27:0,81,1133	0/0:26,0:26:78.25:0,78,1071	0/0:14,0:14:42.14:0,42,587	0/0:17,0:17:51.16:0,51,695	0/0:32,0:32:96.32:0,96,1341	0/0:30,0:30:90.30:0,90,1257	0/0:21,0:21:63.21:0,63,881	0/0:24,0:24:69.20:0,69,944	0/0:21,0:21:60.20:0,60,839	0/0:30,0:30:90.30:0,90,1259	0/0:29,0:29:84.28:0,84,1175	0/0:30,0:30:90.23:0,90,1201	0/0:15,0:15:42.14:0,42,587
chr10	20872804	.	T	TTA	1553.57	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-1.885;DP=599;FS=5.701;HRun=0;HaplotypeScore=70.2238;InbreedingCoeff=0.9910;MQ=87.55;MQ0=0;MQRankSum=-2.074;QD=48.55;ReadPosRankSum=-4.310;VQSLOD=3.2931;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:90.28:0,90,1354	0/0:6,0:6:18.06:0,18,274	0/0:21,0:21:60.11:0,60,844	0/0:22,0:22:57.17:0,57,818	0/0:25,0:25:75.25:0,75,1147	0/0:22,0:22:66.22:0,66,991	0/0:36,0:36:99:0,105,1542	1/1:2,29:32:93.22:1648,93,0	0/0:23,0:23:69.22:0,69,1034	0/0:24,0:24:72.23:0,72,1064	0/0:21,0:21:63.16:0,63,920	0/0:9,0:9:27.08:0,27,393	0/0:19,0:19:57.16:0,57,828	0/0:19,0:19:57.19:0,57,871	0/0:24,0:24:72.24:0,72,1101	0/0:22,0:22:60.19:0,60,896	0/0:19,0:19:57.19:0,57,873	0/0:20,0:20:54.18:0,54,819	0/0:22,0:22:66.20:0,66,969	0/0:21,0:21:60.20:0,60,897	0/0:21,0:21:60.20:0,60,916	0/0:13,0:13:39.12:0,39,573	0/0:18,0:18:54.17:0,54,806	0/0:17,0:17:51.17:0,51,781	0/0:16,0:16:48.14:0,48,694	0/0:30,0:30:90.31:0,90,1375	0/0:26,0:25:78.26:0,78,1194	0/0:20,0:20:60.19:0,60,894
chr10	20873003	.	CT	C	854	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.739;DP=660;FS=3.310;HRun=7;HaplotypeScore=67.1851;InbreedingCoeff=0.9751;MQ=83.24;MQ0=0;MQRankSum=-3.458;QD=21.90;ReadPosRankSum=-2.738;VQSLOD=2.5673;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:87.23:0,87,1064	0/0:5,0:5:15.05:0,15,189	0/0:29,1:29:53.18:0,53,538	0/0:17,0:16:17.23:0,17,338	0/0:31,0:31:87.27:0,87,1081	0/0:27,0:27:78.25:0,78,981	0/0:27,0:27:75.23:0,75,929	1/1:6,33:39:93.21:949,93,0	0/0:22,0:22:57.17:0,57,704	0/0:29,0:29:84.26:0,84,1047	0/0:33,0:33:96.26:0,96,1190	0/0:22,0:22:63.20:0,63,793	0/0:25,0:25:75.24:0,75,933	0/0:15,0:15:42.12:0,42,516	0/0:18,0:18:54.14:0,54,639	0/0:16,0:16:45.14:0,45,566	0/0:35,0:35:96.31:0,96,1204	0/0:23,0:23:63.20:0,63,791	0/0:23,0:23:60.18:0,60,743	0/0:21,0:21:54.14:0,54,643	0/0:25,0:25:63.20:0,63,792	0/0:24,0:24:66.20:0,66,818	0/0:16,0:16:48.15:0,48,604	0/0:15,0:15:42.13:0,42,528	0/0:19,0:19:51.16:0,51,641	0/0:25,0:25:63.20:0,63,793	0/0:32,0:31:90.29:0,90,1131	0/0:15,0:15:39.12:0,39,491
chr10	20873226	.	T	TA	1178.51	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.698;DP=678;FS=0.000;HRun=0;HaplotypeScore=72.7822;InbreedingCoeff=0.9844;MQ=84.95;MQ0=0;MQRankSum=-1.387;QD=42.09;ReadPosRankSum=-4.273;VQSLOD=2.3048;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:63,0:63:99:0,187,2548	0/0:5,0:5:15.05:0,15,210	0/0:28,0:28:75.22:0,75,996	0/0:27,0:25:53.45:0,53,725	0/0:18,0:18:45.15:0,45,629	0/0:25,0:25:75.23:0,75,1029	0/0:27,0:27:74.77:0,75,1030	1/1:0,28:28:84.24:1273,84,0	0/0:24,0:24:72.23:0,72,990	0/0:26,0:26:78.25:0,78,1063	0/0:22,0:22:66.20:0,66,902	0/0:21,0:21:63.20:0,63,863	0/0:26,0:26:78.23:0,78,1052	0/0:15,0:15:42.14:0,42,587	0/0:19,0:19:57.18:0,57,779	0/0:24,0:24:69.23:0,69,965	0/0:31,0:31:93.31:0,93,1301	0/0:22,0:22:66.22:0,66,923	0/0:25,0:25:69.23:0,69,965	0/0:16,0:16:48.16:0,48,671	0/0:37,0:37:99:0,111,1534	0/0:16,0:16:48.15:0,48,654	0/0:21,0:21:60.20:0,60,839	0/0:31,0:31:93.31:0,93,1301	0/0:16,0:16:42.13:0,42,587	0/0:17,0:17:48.16:0,48,671	0/0:28,0:28:84.20:0,84,1132	0/0:20,0:20:57.19:0,57,797
chr10	20873381	.	GC	G	1478.56	PASS	AB=0.843;AC=26;AF=0.464;AN=56;BaseQRankSum=5.769;DP=401;FS=22.173;HRun=12;HaplotypeScore=54.9747;InbreedingCoeff=0.3667;MQ=72.54;MQ0=1;MQRankSum=-2.300;QD=5.62;ReadPosRankSum=3.040;VQSLOD=0.4329;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:41.74:0,42,355	0/1:2,3:5:5.87:38,0,6	0/0:13,0:12:11.01:0,11,97	0/0:12,0:11:9.39:0,9,60	1/1:11,3:14:23.46:160,23,0	0/0:15,0:15:23.84:0,24,174	0/1:19,3:22:14.33:14,0,274	1/1:5,0:29:44.01:128,44,0	0/1:10,0:10:5.55:6,0,97	1/1:7,8:16:19.66:127,20,0	1/1:6,10:15:23.55:162,24,0	0/0:18,0:18:29.80:0,30,250	0/0:17,0:17:33:0,33,306	0/1:9,0:9:0.11:0,0,147	0/1:7,4:11:19.51:20,0,159	1/1:3,9:13:25.92:189,26,0	1/1:3,15:20:43.29:314,43,0	1/1:5,20:26:34.47:379,34,0	1/1:7,3:10:3.30:62,3,0	0/1:12,1:14:23.71:24,0,157	0/0:10,0:9:14.98:0,15,137	0/1:9,1:10:8.32:8,0,85	0/0:6,4:10:11.91:0,12,101	0/0:9,0:9:21:0,21,199	0/1:11,4:15:1.05:1,0,140	0/1:5,2:7:34.38:34,0,43	0/1:13,3:16:2.31:2,0,126	0/0:10,0:9:21.03:0,21,206
chr10	20873785	.	CCTGT	C	15853.93	PASS	AB=0.962;AC=41;AF=0.732;AN=56;BaseQRankSum=11.668;DP=756;FS=0.423;HRun=0;HaplotypeScore=141.4810;InbreedingCoeff=0.8970;MQ=64.71;MQ0=3;MQRankSum=0.435;QD=26.92;ReadPosRankSum=5.268;VQSLOD=4.7696;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,24:35:66.23:1057,66,0	0/0:11,0:11:21.07:0,21,504	0/1:24,1:17:36.01:36,0,169	0/0:26,0:21:36.11:0,36,749	0/0:22,0:22:30.10:0,30,718	1/1:10,15:25:42.14:672,42,0	1/1:14,12:26:36.12:576,36,0	1/1:22,0:36:12.48:113,12,0	1/1:8,25:33:69.24:1105,69,0	0/0:35,0:35:44.26:0,44,1551	0/0:15,0:15:30.10:0,30,665	1/1:6,22:28:54.18:852,54,0	1/1:14,19:33:48.16:768,48,0	1/1:7,20:27:63.20:985,63,0	0/0:36,0:36:81.28:0,81,1941	1/1:14,29:43:93.32:1489,93,0	1/1:12,30:42:81.28:1297,81,0	1/1:8,16:24:39.13:624,39,0	0/0:22,0:22:12.04:0,12,270	1/1:1,9:11:30.09:448,30,0	1/1:13,21:34:57.19:913,57,0	1/1:6,10:16:30.10:480,30,0	1/1:3,11:14:27.09:432,27,0	1/1:8,30:38:69.19:1105,69,0	1/1:7,8:15:24.08:384,24,0	1/1:12,24:36:72.25:1144,72,0	1/1:10,14:24:38.92:624,39,0	1/1:9,14:24:48.16:748,48,0
chr10	20874136	.	C	CAG	1162.13	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.815;DP=632;FS=15.268;HRun=0;HaplotypeScore=72.7619;InbreedingCoeff=0.9917;MQ=89.02;MQ0=0;MQRankSum=-2.334;QD=48.42;ReadPosRankSum=-4.105;VQSLOD=2.1774;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,156,2254	0/0:7,0:7:18.03:0,18,243	0/0:25,0:25:66.16:0,66,916	0/0:21,0:21:54.18:0,54,795	0/0:19,0:19:54.17:0,54,773	0/0:17,0:17:48.12:0,48,661	0/0:30,0:30:84.28:0,84,1237	1/1:2,22:24:69.22:1257,69,0	0/0:24,0:24:66.22:0,66,972	0/0:25,0:25:72.24:0,72,1060	0/0:15,0:15:45.12:0,45,624	0/0:19,0:19:51.17:0,51,751	0/0:16,0:16:48.14:0,48,683	0/0:24,0:24:69.22:0,69,997	0/0:25,0:25:75.21:0,75,1046	0/0:26,0:26:78.26:0,78,1148	0/0:24,0:24:66.22:0,66,972	0/0:21,0:21:60.14:0,60,839	0/0:17,0:17:42.13:0,42,599	0/0:19,0:19:54.18:0,54,795	0/0:35,0:35:99:0,105,1544	0/0:18,0:18:54.18:0,54,795	0/0:16,0:16:42.14:0,42,618	0/0:29,0:29:84.28:0,84,1235	0/0:20,0:20:57.18:0,57,819	0/0:31,0:31:78.26:0,78,1141	0/0:17,0:17:48.16:0,48,706	0/0:13,0:13:33.11:0,33,486
chr10	20874860	.	A	AT	2892.87	PASS	AB=0.960;AC=12;AF=0.214;AN=56;BaseQRankSum=-4.091;DP=605;FS=6.161;HRun=9;HaplotypeScore=66.1079;InbreedingCoeff=0.7925;MQ=80.90;MQ0=0;MQRankSum=0.218;QD=16.53;ReadPosRankSum=-2.124;VQSLOD=3.2625;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:95.98:0,96,833	1/1:2,7:9:18.05:197,18,0	0/0:27,0:26:28.33:0,28,349	0/0:20,0:20:40.26:0,40,305	1/1:2,28:30:69.18:760,69,0	0/0:16,0:17:41.01:0,41,345	0/0:24,0:25:61.99:0,62,523	0/1:35,0:35:86.28:86,0,285	0/0:21,0:21:56.91:0,57,480	1/1:4,31:35:67.14:940,67,0	1/1:2,19:22:56.95:598,57,0	0/0:18,0:18:50.98:0,51,442	0/0:19,0:19:56.96:0,57,488	0/0:20,0:20:56.98:0,57,494	0/0:16,0:16:44.99:0,45,391	0/0:28,0:28:71.96:0,72,625	0/0:22,0:22:59.97:0,60,517	0/0:21,0:21:56.93:0,57,488	1/1:6,15:21:45.11:485,45,0	0/0:22,0:22:59.97:0,60,517	0/0:20,0:20:47.96:0,48,416	0/0:18,0:18:47.99:0,48,417	0/0:19,0:19:50.99:0,51,443	0/0:8,0:8:23.95:0,24,201	0/0:21,0:21:53.98:0,54,469	0/1:21,2:23:6.38:6,0,409	0/0:28,0:28:80.98:0,81,703	0/0:3,0:3:9:0,9,78
chr10	20874864	.	T	TTTTTTC	1586.58	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-5.044;DP=609;FS=0.000;HRun=0;HaplotypeScore=136.1855;InbreedingCoeff=0.9467;MQ=79.66;MQ0=0;MQRankSum=-3.302;QD=45.33;ReadPosRankSum=-3.748;VQSLOD=2.3885;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,99,2028	0/0:8,0:8:14.97:0,15,127	0/0:29,0:28:38.33:0,38,808	0/0:18,0:17:27.32:0,27,694	0/0:32,0:32:74.82:0,75,618	0/0:18,0:18:51.07:0,51,929	0/0:24,0:24:66.19:0,66,1243	1/1:13,19:35:63.19:1681,63,0	0/0:22,0:22:54.18:0,54,1088	0/0:34,0:34:72.66:0,73,637	0/0:23,0:23:49.79:0,50,402	0/0:18,0:18:51.17:0,51,1038	0/0:19,0:19:51.16:0,51,1020	0/0:21,0:21:48.15:0,48,973	0/0:17,0:17:48.12:0,48,884	0/0:30,0:30:69.19:0,69,1323	0/0:22,0:22:51.10:0,51,968	0/0:20,0:20:60.13:0,60,1103	0/0:19,0:19:32.90:0,33,276	0/0:23,0:23:66.21:0,66,1305	0/0:20,0:20:48.11:0,48,917	0/0:19,0:19:48.15:0,48,974	0/0:19,0:19:54.18:0,54,1101	0/0:10,0:10:18.02:0,18,336	0/0:21,0:21:54.17:0,54,1065	0/0:22,0:22:54.16:0,54,1062	0/0:28,0:28:81.24:0,81,1627	0/0:4,0:4:12.03:0,12,214
chr10	20874999	.	C	CT	1222.24	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-8.150;DP=645;FS=0.000;HRun=2;HaplotypeScore=61.1274;InbreedingCoeff=0.8902;MQ=65.38;MQ0=0;MQRankSum=0.121;QD=37.04;ReadPosRankSum=-5.386;VQSLOD=1.7724;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,123,1495	0/0:5,0:5:15.05:0,15,186	0/0:5,0:5:8.24:0,8,119	0/0:5,0:5:12:0,12,119	0/0:25,0:25:72.22:0,72,881	0/0:19,0:19:54.17:0,54,669	0/0:31,0:31:90.28:0,90,1116	1/1:0,33:33:99:1317,99,0	0/0:27,0:27:78.24:0,78,967	0/0:28,0:28:81.25:0,81,1004	0/0:15,0:15:42.13:0,42,520	0/0:23,0:23:69.22:0,69,852	0/0:17,0:17:45.13:0,45,546	0/0:21,0:21:60.18:0,60,730	0/0:27,0:27:81.25:0,81,1004	0/0:28,0:28:78.24:0,78,967	0/0:35,0:35:99:0,99,1199	0/0:25,0:25:75.24:0,75,929	0/0:18,0:18:51.16:0,51,632	0/0:22,0:22:57.15:0,57,680	0/0:49,0:49:99:0,144,1772	0/0:21,0:21:60.18:0,60,731	0/0:20,0:20:54.16:0,54,655	0/0:31,0:31:87.27:0,87,1078	0/0:24,0:24:69.11:0,69,834	0/0:21,0:21:60.18:0,60,733	0/0:20,0:20:60.19:0,60,744	0/0:6,0:6:18.06:0,18,223
chr10	20875841	.	C	CACACACACACAGAG	7765.48	PASS	AB=0.944;AC=45;AF=0.804;AN=56;BaseQRankSum=3.050;DP=425;FS=9.579;HRun=0;HaplotypeScore=174.4441;InbreedingCoeff=0.2613;MQ=40.79;MQ0=21;MQRankSum=-1.653;QD=20.44;ReadPosRankSum=-0.378;VQSLOD=2.6610;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:15:24.05:510,24,0	1/1:7,0:9:9.48:132,9,0	0/0:9,0:4:3.01:0,3,38	0/0:11,0:5:3:0,3,46	1/1:22,0:16:8.49:140,8,0	0/1:22,0:19:50.23:73,0,50	0/1:13,0:12:29.59:199,0,30	1/1:18,0:18:46.76:563,47,0	1/1:15,0:15:14.78:344,15,0	1/1:16,0:14:24.08:367,24,0	1/1:17,0:14:2.95:50,3,0	1/1:10,0:10:15.05:320,15,0	1/1:11,0:11:24.06:530,24,0	1/1:12,2:16:12.04:198,12,0	0/0:25,0:24:51.15:0,51,894	1/1:17,0:17:30.88:641,31,0	1/1:16,0:15:25.42:342,25,0	1/1:14,0:13:23.49:458,23,0	1/1:6,0:4:5.38:48,5,0	0/1:21,0:21:28.66:294,0,29	0/1:8,0:7:31.71:32,0,38	1/1:18,0:17:21.44:278,21,0	1/1:12,0:10:16.43:263,16,0	1/1:23,0:23:34.04:593,34,0	1/1:9,0:8:12.03:196,12,0	1/1:14,0:12:30.03:647,30,0	0/1:11,0:15:32.72:187,0,33	1/1:13,0:12:23.04:359,23,0
chr10	20875964	.	AT	A	489.86	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.137;DP=483;FS=7.646;HRun=8;HaplotypeScore=57.7243;InbreedingCoeff=0.9083;MQ=74.37;MQ0=1;MQRankSum=-1.082;QD=18.14;ReadPosRankSum=-3.694;VQSLOD=2.3072;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:60.12:0,60,695	0/0:10,0:10:24.07:0,24,289	0/0:15,0:14:27.35:0,27,246	0/0:12,0:11:6.88:0,7,183	0/0:18,0:18:45.13:0,45,532	0/0:18,0:18:48.15:0,48,580	0/0:23,0:23:63.14:0,63,734	1/1:5,22:27:62.99:585,63,0	0/0:17,0:17:39.10:0,39,457	0/0:20,0:20:50.82:0,51,606	0/0:11,0:11:21.05:0,21,243	0/0:12,0:12:33.10:0,33,398	0/0:14,0:14:33.06:0,33,382	0/0:18,0:18:41.98:0,42,460	0/0:39,0:39:99:0,99,1122	0/0:17,0:17:39.11:0,39,459	0/0:22,0:22:48.15:0,48,579	0/0:14,0:14:39.06:0,39,442	0/0:13,0:13:27.08:0,27,326	0/0:15,0:15:27.08:0,27,326	0/0:13,0:13:30.09:0,30,362	0/0:15,0:15:39.09:0,39,448	0/0:12,0:12:30.08:0,30,351	0/0:15,0:15:39.09:0,39,452	0/0:12,0:12:30.06:0,30,338	0/0:21,0:21:57.14:0,57,652	0/0:19,0:19:54.16:0,54,640	0/0:14,0:13:30.08:0,30,346
chr10	20875989	.	TTGTG	T	1523.70	PASS	AB=0.846;AC=32;AF=0.667;AN=48;BaseQRankSum=-0.503;DP=483;FS=0.000;HRun=0;HaplotypeScore=80.6514;InbreedingCoeff=0.2710;MQ=62.35;MQ0=11;MQRankSum=0.033;QD=4.37;ReadPosRankSum=0.804;VQSLOD=1.4489;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:21,0:28:19.16:19,0,68	0/0:8,0:11:2.74:0,3,12	./.	./.	0/1:9,0:12:6.49:14,0,6	1/1:13,11:23:6.02:92,6,0	1/1:21,4:25:8.54:139,9,0	0/0:25,0:24:8.87:0,9,89	1/1:14,6:22:12.03:149,12,0	0/0:10,0:17:29.52:0,30,289	./.	1/1:15,1:16:8.98:93,9,0	1/1:13,3:16:3.01:46,3,0	0/1:8,4:12:17.72:40,0,18	1/1:21,13:33:18.06:279,18,0	1/1:11,8:18:9.03:139,9,0	1/1:11,10:20:9.03:139,9,0	1/1:13,5:18:15.04:214,15,0	0/0:10,0:10:2.90:0,3,16	1/1:7,0:10:9.48:84,9,0	0/1:17,0:17:0:0,0,0	1/1:8,2:10:3.01:46,3,0	1/1:10,0:11:5.94:46,6,0	./.	1/1:8,2:10:3.01:46,3,0	0/1:19,0:19:6.04:41,0,6	0/1:16,4:21:4.21:41,0,4	0/0:7,0:6:2.96:0,3,19
chr10	20876301	.	T	TAC	1304.53	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-6.224;DP=617;FS=9.286;HRun=0;HaplotypeScore=76.0186;InbreedingCoeff=0.9953;MQ=90.07;MQ0=0;MQRankSum=1.147;QD=43.48;ReadPosRankSum=-3.650;VQSLOD=3.7489;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,120,1835	0/0:8,0:8:24.08:0,24,366	0/0:25,0:25:72.23:0,72,1019	0/0:32,0:32:66.13:0,66,1029	0/0:26,0:26:72.24:0,72,1101	0/0:19,0:19:57.19:0,57,872	0/0:23,0:23:69.23:0,69,1055	1/1:6,24:30:78.22:1399,78,0	0/0:22,0:22:66.22:0,66,1008	0/0:19,0:19:51.17:0,51,781	0/0:18,0:18:48.16:0,48,732	0/0:23,0:23:69.23:0,69,1057	0/0:12,0:12:36.12:0,36,549	0/0:22,0:22:60.19:0,60,894	0/0:26,0:26:66.22:0,66,1011	0/0:21,0:21:63.20:0,63,940	0/0:33,0:33:90.31:0,90,1376	0/0:15,0:15:36.12:0,36,541	0/0:30,0:30:84.29:0,84,1287	0/0:15,0:15:39.12:0,39,571	0/0:36,0:36:99:0,105,1605	0/0:18,0:18:54.18:0,54,826	0/0:14,0:14:42.14:0,42,643	0/0:32,0:32:93.32:0,93,1419	0/0:15,0:15:42.14:0,42,641	0/0:22,0:22:66.21:0,66,973	0/0:13,0:13:33.11:0,33,503	0/0:8,0:8:24.08:0,24,368
chr10	20876541	.	C	CT	1118.67	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-7.564;DP=679;FS=3.407;HRun=2;HaplotypeScore=72.0460;InbreedingCoeff=0.9980;MQ=87.16;MQ0=0;MQRankSum=0.840;QD=34.96;ReadPosRankSum=-3.572;VQSLOD=2.6227;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,156,1889	0/0:10,0:10:27.08:0,27,335	0/0:29,0:30:54.97:0,55,684	0/0:17,0:17:31.77:0,32,377	0/0:24,0:24:66.21:0,66,818	0/0:27,0:27:81.25:0,81,1004	0/0:27,0:27:81.25:0,81,1004	1/1:3,29:32:87.26:1214,87,0	0/0:24,0:24:72.23:0,72,893	0/0:28,0:28:76.79:0,77,934	0/0:11,0:11:33.10:0,33,408	0/0:22,0:22:63.20:0,63,781	0/0:25,0:25:75.24:0,75,930	0/0:34,0:34:99:0,99,1227	0/0:30,0:30:84.25:0,84,1029	0/0:31,0:31:90.27:0,90,1104	0/0:31,0:31:90.28:0,90,1115	0/0:21,0:21:60.19:0,60,744	0/0:25,0:25:72.23:0,72,892	0/0:14,0:14:39.10:0,39,459	0/0:23,0:23:63.20:0,63,781	0/0:26,0:26:75.24:0,75,929	0/0:15,0:15:42.13:0,42,520	0/0:19,0:18:57.16:0,57,693	0/0:15,0:15:42.11:0,42,506	0/0:26,0:26:75.21:0,75,905	0/0:23,0:23:69.22:0,69,855	0/0:15,0:15:33.10:0,33,409
chr10	20877081	.	GA	G	179.97	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.446;DP=846;FS=0.000;HRun=2;HaplotypeScore=82.7025;InbreedingCoeff=0.9952;MQ=81.95;MQ0=0;MQRankSum=-3.798;QD=13.84;ReadPosRankSum=-1.433;VQSLOD=2.2926;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:61,0:61:99:0,184,2676	0/0:10,0:10:30.10:0,30,449	0/0:24,0:24:71.82:0,72,996	0/0:28,0:28:75.22:0,75,1077	0/0:37,0:37:99:0,105,1529	0/0:24,0:24:72.24:0,72,1061	0/0:19,0:19:54.18:0,54,809	1/1:0,13:11:21.07:272,21,0	0/0:32,0:32:93.31:0,93,1390	0/0:31,0:31:84.28:0,84,1250	0/0:19,0:19:48.15:0,48,699	0/0:43,0:43:99:0,129,1930	0/0:31,0:31:93.31:0,93,1371	0/0:35,0:35:99:0,102,1507	0/0:49,0:49:99:0,147,2162	0/0:34,0:34:96.33:0,96,1439	0/0:38,0:38:99:0,111,1663	0/0:26,0:26:75.24:0,75,1103	0/0:16,0:16:48.14:0,48,692	0/0:20,0:20:60.18:0,60,844	0/0:68,0:68:99:0,196,2842	0/0:29,0:29:84.27:0,84,1237	0/0:23,0:23:69.23:0,69,1033	0/0:29,0:29:84.27:0,84,1221	0/0:26,0:26:75.25:0,75,1103	0/0:30,0:30:84.26:0,84,1221	0/0:40,0:40:99:0,117,1751	0/0:11,0:11:33.11:0,33,495
chr10	20877310	.	ATACCAAG	A	1359.21	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.596;DP=712;FS=0.855;HRun=0;HaplotypeScore=161.4409;InbreedingCoeff=0.9842;MQ=76.44;MQ0=0;MQRankSum=-3.986;QD=64.72;ReadPosRankSum=-3.507;VQSLOD=3.1692;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,132,4979	0/0:12,0:12:33.11:0,33,1350	0/0:17,0:17:48.16:0,48,1768	0/0:19,0:19:51.13:0,51,1689	0/0:25,0:25:75.24:0,75,2878	0/0:19,0:19:57.20:0,57,2335	0/0:22,0:22:60.21:0,60,2357	1/1:1,20:21:60.19:1454,60,0	0/0:32,0:32:96.33:0,96,3833	0/0:28,0:28:84.23:0,84,3087	0/0:14,0:14:42.14:0,42,1720	0/0:26,0:26:75.26:0,75,2931	0/0:29,0:29:87.28:0,87,3361	0/0:37,0:37:99:0,111,4278	0/0:30,0:30:90.29:0,90,3567	0/0:41,0:41:99:0,120,4739	0/0:38,0:38:99:0,111,4320	0/0:20,0:20:60.21:0,60,2374	0/0:20,0:20:57.20:0,57,2142	0/0:19,0:19:57.20:0,57,2149	0/0:36,0:36:99:0,105,4155	0/0:21,0:21:60.21:0,60,2399	0/0:16,0:16:48.16:0,48,1848	0/0:29,0:29:87.30:0,87,3458	0/0:16,0:16:48.16:0,48,1850	0/0:32,0:32:93.32:0,93,3720	0/0:40,0:40:99:0,117,4782	0/0:8,0:8:15.05:0,15,614
chr10	20878430	.	C	CGGA	559.71	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-4.686;DP=561;FS=9.181;HRun=0;HaplotypeScore=81.5760;InbreedingCoeff=0.9789;MQ=91.06;MQ0=0;MQRankSum=-3.550;QD=29.46;ReadPosRankSum=-2.716;VQSLOD=2.8147;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,114,1827	0/0:8,0:8:18.06:0,18,289	0/0:20,0:20:51.16:0,51,792	0/0:26,0:26:69.23:0,69,1099	0/0:11,0:11:27.06:0,27,385	0/0:14,0:14:36.12:0,36,578	0/0:25,0:25:72.25:0,72,1156	1/1:9,9:19:30.10:654,30,0	0/0:16,0:16:48.16:0,48,771	0/0:17,0:17:48.15:0,48,728	0/0:18,0:18:48.16:0,48,771	0/0:23,0:23:69.22:0,69,1084	0/0:20,0:20:60.20:0,60,947	0/0:16,0:16:42.14:0,42,675	0/0:29,0:29:84.29:0,84,1350	0/0:15,0:15:42.13:0,42,652	0/0:32,0:32:93.32:0,93,1494	0/0:32,0:31:84.27:0,84,1324	0/0:22,0:22:48.15:0,48,748	0/0:14,0:14:36.12:0,36,578	0/0:34,0:34:90.31:0,90,1443	0/0:18,0:18:51.17:0,51,807	0/0:10,0:10:17.76:0,18,289	0/0:28,0:28:75.24:0,75,1181	0/0:10,0:10:27.09:0,27,431	0/0:18,0:18:45.14:0,45,701	0/0:18,0:18:51.04:0,51,786	0/0:10,0:10:24.08:0,24,386
chr10	20879440	.	C	CT	561.66	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-5.958;DP=516;FS=9.198;HRun=1;HaplotypeScore=53.1208;InbreedingCoeff=0.9307;MQ=61.89;MQ0=5;MQRankSum=-3.538;QD=29.56;ReadPosRankSum=-3.388;VQSLOD=1.5410;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,120,1493	0/0:6,0:6:18.06:0,18,234	0/0:24,0:15:39.05:0,39,468	0/0:21,0:14:27.04:0,27,327	0/0:11,0:11:27.09:0,27,351	0/0:21,0:21:63.16:0,63,775	0/0:26,0:25:69.21:0,69,878	1/1:0,19:16:45.15:656,45,0	0/0:19,0:19:57.14:0,57,719	0/0:14,0:14:39.12:0,39,484	0/0:3,0:3:9.03:0,9,116	0/0:16,0:16:45.08:0,45,563	0/0:15,0:15:42.14:0,42,545	0/0:19,0:19:57.17:0,57,725	0/0:26,0:26:74.89:0,75,921	0/0:21,0:21:63.12:0,63,782	0/0:34,0:34:96.31:0,96,1246	0/0:20,0:21:51.44:0,51,698	0/0:14,0:12:27.08:0,27,337	0/0:11,0:11:33.07:0,33,398	0/0:31,0:31:93.27:0,93,1179	0/0:9,0:9:21.07:0,21,271	0/0:10,0:10:30.06:0,30,371	0/0:21,0:21:50.75:0,51,633	0/0:11,0:11:33.11:0,33,429	0/0:14,0:14:39.11:0,39,481	0/0:23,0:23:69.22:0,69,895	0/0:13,0:13:39.13:0,39,506
chr10	20879514	.	CATAGATAGATAGATAGATAGATAG	C	590.98	PASS	AB=0.904;AC=4;AF=0.083;AN=48;BaseQRankSum=3.674;DP=529;FS=9.952;HRun=0;HaplotypeScore=297.2342;InbreedingCoeff=0.1434;MQ=52.71;MQ0=5;MQRankSum=-1.853;QD=12.85;ReadPosRankSum=-1.779;VQSLOD=0.3224;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:38:36.12:0,36,1595	0/1:9,0:9:99:204,0,237	./.	./.	./.	0/0:17,0:16:11.66:0,12,689	0/0:17,0:17:0.98:0,1,45	0/0:34,0:29:2.37:0,2,8	0/0:14,0:14:12.04:0,12,681	0/1:16,5:21:99:276,0,231	./.	0/0:12,0:11:5.39:0,5,490	0/0:13,0:13:11.66:0,12,933	0/0:22,0:21:14.81:0,15,707	0/0:15,0:21:15.05:0,15,572	0/0:19,0:19:24.08:0,24,1582	0/0:20,0:24:24.08:0,24,1133	0/0:17,0:17:33.11:0,33,2460	1/1:14,2:16:2.31:210,2,0	0/0:15,0:15:12.16:0,12,611	0/0:23,0:22:12.04:0,12,649	0/0:18,0:18:12.04:0,12,618	0/0:18,0:17:8.63:0,9,366	0/0:18,0:18:15.05:0,15,523	0/0:18,0:18:5.96:0,6,83	0/0:27,0:26:45.15:0,45,2836	0/0:19,0:19:27.09:0,27,1251	0/0:10,0:10:6.02:0,6,299
chr10	20879564	.	TAG	T	57.62	PASS	AB=0.889;AC=3;AF=0.056;AN=54;BaseQRankSum=4.686;DP=422;FS=7.059;HRun=0;HaplotypeScore=85.8738;InbreedingCoeff=-0.0697;MQ=50.78;MQ0=21;MQRankSum=-3.151;QD=2.74;ReadPosRankSum=2.236;VQSLOD=1.2299;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:63.21:0,63,924	0/1:5,5:10:55.58:56,0,168	./.	0/0:8,0:2:4.83:0,5,48	0/0:8,5:13:24.08:0,24,340	0/0:16,0:15:29.59:0,30,441	0/0:19,0:16:33.58:0,34,471	0/0:44,0:14:42.14:0,42,601	0/0:13,0:13:33.11:0,33,502	0/1:9,0:9:65.30:65,0,168	0/0:7,0:6:6.02:0,6,86	0/0:12,0:11:23.83:0,24,387	0/0:9,0:9:14.94:0,15,245	0/0:15,0:13:30:0,30,427	0/0:21,0:21:36.33:0,36,592	0/0:19,0:19:48.16:0,48,728	0/0:16,0:16:35.20:0,35,513	0/0:19,0:18:49.98:0,50,797	0/1:2,0:2:36.07:36,0,37	0/0:16,0:16:41.99:0,42,615	0/0:10,0:9:21.07:0,21,314	0/0:10,0:10:24.08:0,24,373	0/0:18,0:17:29.54:0,30,443	0/0:14,0:14:24.08:0,24,341	0/0:18,0:17:29.77:0,30,439	0/0:19,0:18:54.18:0,54,904	0/0:25,0:25:69.19:0,69,984	0/0:8,0:8:18.06:0,18,248
chr10	20879588	.	T	TAG	158.64	PASS	AB=0.794;AC=4;AF=0.071;AN=56;BaseQRankSum=1.525;DP=392;FS=2.660;HRun=0;HaplotypeScore=74.9491;InbreedingCoeff=-0.1032;MQ=57.17;MQ0=5;MQRankSum=-3.358;QD=3.53;ReadPosRankSum=-4.144;VQSLOD=0.7844;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:12.23:0,12,471	0/0:5,0:5:12.04:0,12,176	0/0:18,0:11:18.74:0,19,357	0/0:19,0:12:29.21:0,29,355	0/0:10,0:10:30.10:0,30,456	0/0:11,2:12:20.16:0,20,281	0/0:16,0:14:29.30:0,29,455	0/0:36,0:30:54.38:0,54,497	0/0:9,0:9:27.09:0,27,389	0/0:12,0:12:21.06:0,21,290	0/0:10,0:9:15.05:0,15,228	0/0:10,2:11:24.08:0,24,365	0/1:8,2:10:16.75:17,0,161	0/0:10,2:10:24.08:0,24,365	0/0:21,0:21:51.07:0,51,699	0/0:19,0:19:0.37:0,0,599	0/0:10,0:10:18.02:0,18,257	0/0:15,0:14:36.09:0,36,548	0/0:6,0:5:12.04:0,12,182	0/0:14,1:15:39.13:0,39,575	0/0:8,0:8:13.93:0,14,186	0/1:7,2:9:39.79:40,0,210	0/0:15,2:16:23.96:0,24,365	0/1:4,3:7:37.74:38,0,125	0/0:13,4:16:26.93:0,27,410	0/1:15,4:18:99:172,0,545	0/0:20,1:21:0.76:0,1,727	0/0:6,2:8:18.06:0,18,274
chr10	20879628	.	ATGGG	A	1219.67	PASS	AB=0.929;AC=3;AF=0.054;AN=56;BaseQRankSum=4.024;DP=379;FS=0.673;HRun=0;HaplotypeScore=62.3637;InbreedingCoeff=0.5343;MQ=57.99;MQ0=17;MQRankSum=-4.688;QD=23.01;ReadPosRankSum=-4.642;VQSLOD=1.9829;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:53.85:0,54,898	0/0:5,0:5:15.03:0,15,241	0/0:37,0:14:13.35:0,13,500	0/0:30,0:16:7.48:0,7,426	0/0:11,0:11:30.03:0,30,574	0/0:9,0:8:21.01:0,21,332	0/1:12,1:13:14.37:14,0,373	1/1:36,4:37:75.08:1309,75,0	0/0:12,0:12:35.97:0,36,556	0/0:12,0:12:36.12:0,36,831	0/0:8,0:8:21.06:0,21,473	0/0:9,0:9:21.04:0,21,374	0/0:4,0:4:9.03:0,9,243	0/0:9,0:8:24.05:0,24,460	0/0:18,0:17:47.77:0,48,970	0/0:15,0:15:42.11:0,42,985	0/0:8,0:8:21.53:0,22,378	0/0:9,0:8:18.03:0,18,302	0/0:9,0:4:11.94:0,12,120	0/0:13,0:13:39.10:0,39,845	0/0:10,0:10:27.06:0,27,556	0/0:9,0:8:24.04:0,24,390	0/0:8,0:8:18.01:0,18,272	0/0:4,0:4:9.01:0,9,147	0/0:14,0:14:42.06:0,42,702	0/0:20,0:20:60.19:0,60,1360	0/0:12,0:12:36.06:0,36,725	0/0:12,0:11:33.11:0,33,873
chr10	20879664	.	T	TA	1149.32	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-2.681;DP=399;FS=17.669;HRun=8;HaplotypeScore=46.7835;InbreedingCoeff=0.7969;MQ=75.36;MQ0=0;MQRankSum=-4.769;QD=26.12;ReadPosRankSum=-3.556;VQSLOD=1.3812;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:65.96:0,66,594	0/0:2,0:2:6:0,6,55	0/0:17,0:16:6.82:0,7,228	0/0:25,0:20:16.13:0,16,200	0/0:9,0:9:26.97:0,27,233	0/0:12,0:11:33.02:0,33,302	0/0:12,0:12:33.02:0,33,302	1/1:7,37:44:99:1244,111,0	0/0:9,0:9:27.01:0,27,247	0/0:22,0:22:63.02:0,63,572	0/0:15,0:15:39:0,39,351	0/0:9,0:9:23.99:0,24,215	0/0:8,0:8:20.98:0,21,186	0/0:9,0:9:24:0,24,215	0/0:13,0:13:33:0,33,295	0/0:17,0:17:44.98:0,45,396	0/0:8,0:8:18.78:0,19,179	0/0:15,0:15:38.97:0,39,346	0/0:7,0:7:14.99:0,15,134	0/0:15,0:15:39.02:0,39,357	0/0:11,0:11:33:0,33,295	0/0:10,0:10:18:0,18,165	0/0:11,0:11:30.01:0,30,274	0/0:9,0:9:27.01:0,27,244	0/0:13,0:13:36.02:0,36,329	0/0:26,0:26:63:0,63,569	0/0:12,0:12:36.02:0,36,329	0/0:14,0:14:41.97:0,42,372
chr10	20879718	.	TACTC	T	873.66	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=1.308;DP=513;FS=6.737;HRun=0;HaplotypeScore=81.0084;InbreedingCoeff=0.9977;MQ=98.07;MQ0=0;MQRankSum=-4.854;QD=33.60;ReadPosRankSum=-3.453;VQSLOD=2.2767;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,114,3065	0/0:9,0:9:27.05:0,27,691	0/0:29,0:29:87.18:0,87,2121	0/0:24,0:24:69.24:0,69,1842	0/0:19,0:19:57.20:0,57,1594	0/0:19,0:18:54.15:0,54,1372	0/0:18,0:18:54.19:0,54,1510	1/1:9,17:24:60.08:969,60,0	0/0:19,0:19:57.14:0,57,1373	0/0:17,0:17:51.16:0,51,1283	0/0:21,0:21:63.22:0,63,1739	0/0:10,0:10:30.10:0,30,836	0/0:15,0:15:45.07:0,45,1191	0/0:14,0:13:39.12:0,39,1032	0/0:14,0:14:42.13:0,42,1115	0/0:16,0:16:48.15:0,48,1283	0/0:17,0:17:51.16:0,51,1293	0/0:17,0:17:51.11:0,51,1360	0/0:16,0:16:48.15:0,48,1251	0/0:14,0:14:42.14:0,42,1165	0/0:22,0:22:66.23:0,66,1844	0/0:11,0:11:30.10:0,30,823	0/0:13,0:13:39.12:0,39,1004	0/0:23,0:23:66.23:0,66,1830	0/0:14,0:14:39.12:0,39,1032	0/0:21,0:21:60.18:0,60,1607	0/0:19,0:19:57.20:0,57,1590	0/0:17,0:17:51.12:0,51,1245
chr10	20880408	.	C	CTAGATGG	1769.80	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.599;DP=664;FS=7.373;HRun=0;HaplotypeScore=153.5948;InbreedingCoeff=0.9983;MQ=82.52;MQ0=0;MQRankSum=-6.552;QD=84.28;ReadPosRankSum=-2.671;VQSLOD=3.4999;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,147,3957	0/0:14,0:14:42.13:0,42,1114	0/0:20,0:21:46.39:0,46,954	0/0:17,0:18:41.97:0,42,882	0/0:23,0:23:69.22:0,69,1788	0/0:15,0:15:45.15:0,45,1255	0/0:29,0:29:87.26:0,87,2235	1/1:10,11:21:63.14:1865,63,0	0/0:20,0:20:60.16:0,60,1556	0/0:21,0:21:63.22:0,63,1731	0/0:17,0:17:51.16:0,51,1281	0/0:25,0:25:75.24:0,75,1997	0/0:25,0:25:75.26:0,75,2014	0/0:24,0:24:72.25:0,72,2010	0/0:34,0:34:99:0,99,2663	0/0:31,0:31:93.32:0,93,2590	0/0:25,0:25:75.26:0,75,2052	0/0:39,0:39:99:0,114,2933	0/0:14,0:14:42.14:0,42,1169	0/0:11,0:11:30.09:0,30,712	0/0:66,0:66:99:0,199,5060	0/0:15,0:15:42.12:0,42,1042	0/0:13,0:13:39.13:0,39,1074	0/0:27,0:27:81.16:0,81,2006	0/0:18,0:18:54.19:0,54,1477	0/0:22,0:22:60.21:0,60,1612	0/0:17,0:17:51.18:0,51,1388	0/0:9,0:9:27.09:0,27,755
chr10	20880904	.	A	AT	1009.34	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.722;DP=682;FS=8.154;HRun=1;HaplotypeScore=68.2125;InbreedingCoeff=0.9824;MQ=86.02;MQ0=0;MQRankSum=-1.149;QD=36.05;ReadPosRankSum=-2.825;VQSLOD=2.4123;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:56:99:0,165,2046	0/0:8,0:8:24.08:0,24,311	0/0:28,0:28:78.20:0,78,951	0/0:16,0:16:36.11:0,36,454	0/0:15,0:15:45.14:0,45,570	0/0:23,0:23:69.18:0,69,876	0/0:24,0:24:69.20:0,69,867	1/1:3,25:28:75.24:1104,75,0	0/0:22,0:22:60.19:0,60,779	0/0:21,0:21:63.20:0,63,818	0/0:17,0:17:51.16:0,51,654	0/0:33,0:33:93.27:0,93,1177	0/0:25,0:25:69.21:0,69,880	0/0:24,0:24:72.23:0,72,932	0/0:28,0:28:75.20:0,75,929	0/0:32,0:32:93.30:0,93,1208	0/0:38,0:38:99:0,111,1439	0/0:27,0:27:81.26:0,81,1052	0/0:22,0:22:66.19:0,66,841	0/0:17,0:17:48.07:0,48,601	0/0:32,0:32:93.30:0,93,1205	0/0:22,0:22:63.19:0,63,803	0/0:20,0:20:60.19:0,60,776	0/0:33,0:33:93.26:0,93,1186	0/0:23,0:23:69.20:0,69,879	0/0:19,0:19:54.18:0,54,701	0/0:23,0:23:69.22:0,69,895	0/0:6,0:6:15.05:0,15,194
chr10	20881416	.	TGTCCAAAGCCCTGG	T	1448.27	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.337;DP=724;FS=6.042;HRun=0;HaplotypeScore=269.4260;InbreedingCoeff=0.9994;MQ=66.59;MQ0=1;MQRankSum=-3.563;QD=76.22;ReadPosRankSum=-3.304;VQSLOD=2.3271;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,148,9526	0/0:11,0:11:33.10:0,33,1759	0/0:19,0:16:48.16:0,48,2554	0/0:17,0:17:42.14:0,42,2411	0/0:24,0:24:66.20:0,66,4269	0/0:16,0:16:48.16:0,48,3269	0/0:22,0:22:66.20:0,66,4187	1/1:0,19:19:57.06:1543,57,0	0/0:29,0:29:87.26:0,87,5409	0/0:33,0:33:93.32:0,93,5481	0/0:19,0:19:57.19:0,57,3750	0/0:23,0:23:66.23:0,66,4350	0/0:20,0:20:60.21:0,60,4197	0/0:33,0:33:99:0,99,6405	0/0:32,0:32:96.32:0,96,6557	0/0:33,0:33:87.30:0,87,5819	0/0:47,0:47:99:0,138,9245	0/0:26,0:26:75.26:0,75,5017	0/0:22,0:22:66.06:0,66,3807	0/0:36,0:36:99:0,105,7069	0/0:35,0:35:99:0,102,6589	0/0:17,0:17:48.15:0,48,2890	0/0:19,0:19:57.16:0,57,3107	0/0:35,0:35:99:0,99,6637	0/0:18,0:18:54.17:0,54,3433	0/0:29,0:29:84.29:0,84,5335	0/0:29,0:29:84.27:0,84,5242	0/0:11,0:11:33.11:0,33,2310
chr10	20882038	.	G	GA	1272.51	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-1.781;DP=662;FS=0.695;HRun=0;HaplotypeScore=66.3684;InbreedingCoeff=0.8835;MQ=82.78;MQ0=0;MQRankSum=-3.874;QD=38.56;ReadPosRankSum=-3.017;VQSLOD=2.6960;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,108,1501	0/0:5,0:5:15.05:0,15,210	0/0:22,0:22:60.18:0,60,804	0/0:17,0:17:45.15:0,45,620	0/0:11,0:11:30.10:0,30,416	0/0:12,0:12:36.10:0,36,485	0/0:45,0:45:99:0,132,1844	1/1:4,29:33:88.81:1367,89,0	0/0:25,0:25:72.24:0,72,1006	0/0:13,0:13:39.13:0,39,546	0/0:2,0:2:6.02:0,6,81	0/0:41,0:41:99:0,123,1705	0/0:34,0:34:99:0,99,1361	0/0:35,0:35:99:0,105,1453	0/0:34,0:34:99:0,100,1384	0/0:36,0:36:99:0,108,1508	0/0:38,0:38:99:0,114,1574	0/0:28,0:28:84.25:0,84,1155	0/0:15,0:15:45.15:0,45,622	0/0:12,0:12:36.11:0,36,482	0/0:47,0:47:99:0,135,1859	0/0:7,0:7:21.06:0,21,274	0/0:7,0:7:21.07:0,21,293	0/0:30,0:30:90.28:0,90,1239	0/0:12,0:12:36.12:0,36,502	0/0:19,0:19:57.19:0,57,795	0/0:38,0:38:99:0,111,1533	0/0:8,0:8:24.08:0,24,331
chr10	20882075	.	G	GGCGGGAT	3736.86	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-2.333;DP=752;FS=6.246;HRun=0;HaplotypeScore=170.1989;InbreedingCoeff=0.9719;MQ=91.50;MQ0=0;MQRankSum=-7.519;QD=98.34;ReadPosRankSum=-3.925;VQSLOD=3.7634;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,123,3077	0/0:5,0:5:15.05:0,15,396	0/0:33,0:33:93.05:0,93,2209	0/0:29,0:29:51.67:0,52,1560	0/0:16,0:16:48.16:0,48,1222	0/0:25,0:25:75.26:0,75,1932	0/0:43,0:43:99:0,129,3278	1/1:18,20:38:99:3737,108,0	0/0:31,0:31:75.92:0,76,2015	0/0:22,0:22:63.21:0,63,1542	0/0:8,0:8:18.05:0,18,378	0/0:43,0:43:99:0,129,3314	0/0:29,0:29:87.28:0,87,2239	0/0:33,0:33:99:0,99,2577	0/0:32,0:32:96.32:0,96,2442	0/0:39,0:39:99:0,117,3078	0/0:38,0:38:99:0,111,2841	0/0:26,0:26:72.25:0,72,1889	0/0:11,0:11:30.10:0,30,652	0/0:7,0:7:21.07:0,21,527	0/0:52,0:52:99:0,151,3868	0/0:13,0:13:36.12:0,36,950	0/0:12,0:12:33.11:0,33,827	0/0:35,0:35:99:0,105,2634	0/0:21,0:21:60.20:0,60,1529	0/0:27,0:27:78.26:0,78,2005	0/0:29,0:29:87.27:0,87,2134	0/0:11,0:11:33.11:0,33,862
chr10	20882679	.	T	TA	7574.79	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=14.993;DP=389;FS=52.906;HRun=1;HaplotypeScore=116.8508;InbreedingCoeff=0.9024;MQ=91.73;MQ0=0;MQRankSum=-14.886;QD=32.51;ReadPosRankSum=-2.038;VQSLOD=0.2939;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,16:17:32.85:378,33,0	0/0:8,0:8:21.05:0,21,258	0/0:22,0:22:62.51:0,63,741	0/0:19,0:19:50.76:0,51,579	0/0:23,0:23:69.18:0,69,861	1/1:0,8:8:24.08:358,24,0	1/1:2,14:16:39.13:556,39,0	1/1:7,15:22:54.06:735,54,0	1/1:0,8:8:24.08:358,24,0	0/0:26,0:26:69.22:0,69,896	0/0:18,0:18:54.18:0,54,701	1/1:1,12:13:33.11:492,33,0	1/1:0,6:6:18.06:269,18,0	1/1:1,8:9:26.88:370,27,0	0/0:16,0:16:42.14:0,42,545	1/1:1,5:6:15.05:224,15,0	1/1:1,4:5:6.02:90,6,0	1/1:3,6:9:15.02:201,15,0	0/0:24,0:24:72.23:0,72,923	1/1:0,20:20:51.17:719,51,0	1/1:3,5:8:12.04:148,12,0	1/1:1,11:12:35.99:480,36,0	1/1:3,19:22:51.08:696,51,0	1/1:1,11:12:6.03:31,6,0	1/1:0,12:12:33.11:466,33,0	1/1:3,10:13:0.08:449,0,0	1/1:5,7:12:30.10:421,30,0	1/1:0,3:3:9.03:135,9,0
chr10	20882727	.	T	TTTA	9712.43	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=15.185;DP=418;FS=149.747;HRun=0;HaplotypeScore=143.6314;InbreedingCoeff=0.9623;MQ=75.85;MQ0=0;MQRankSum=-15.886;QD=37.07;ReadPosRankSum=-0.121;VQSLOD=1.2143;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,1:18:47.99:658,48,0	0/0:7,0:7:21.06:0,21,329	0/0:24,0:23:59.83:0,60,806	0/0:16,0:14:29.74:0,30,447	0/0:22,0:22:66.22:0,66,1101	1/1:1,0:8:21.05:302,21,0	1/1:1,1:13:30.08:472,30,0	1/1:7,15:22:54.58:1111,55,0	1/1:1,1:15:30.09:497,30,0	0/0:20,0:20:60.20:0,60,996	0/0:27,0:27:78.19:0,78,1222	1/1:0,1:13:33.09:509,33,0	1/1:0,0:10:21.07:341,21,0	1/1:0,4:24:54.12:877,54,0	0/0:13,0:13:39.12:0,39,630	1/1:2,1:11:27.01:390,27,0	1/1:1,4:6:6.02:140,6,0	1/1:0,0:13:36.11:581,36,0	0/0:27,0:27:81.21:0,81,1219	1/1:3,0:15:36.01:469,36,0	1/1:3,0:10:21.03:275,21,0	1/1:0,0:7:21.03:297,21,0	1/1:1,1:11:30.02:457,30,0	1/1:3,0:14:23.89:257,24,0	1/1:0,1:12:36.11:590,36,0	1/1:2,1:20:8.35:753,8,0	1/1:0,0:15:39.12:608,39,0	1/1:1,0:4:12:127,12,0
chr10	20883045	.	CA	C	685.21	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.602;DP=699;FS=0.873;HRun=1;HaplotypeScore=70.7307;InbreedingCoeff=0.9998;MQ=84.35;MQ0=0;MQRankSum=-1.563;QD=34.26;ReadPosRankSum=-2.497;VQSLOD=2.7585;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,138,2177	0/0:13,0:13:39.12:0,39,596	0/0:20,0:20:54.09:0,54,716	0/0:25,0:25:56.81:0,57,802	0/0:20,0:20:57.19:0,57,908	0/0:31,0:31:90.28:0,90,1385	0/0:32,0:32:96.30:0,96,1483	1/1:0,20:20:57.18:780,57,0	0/0:18,0:18:51.16:0,51,788	0/0:19,0:19:51.17:0,51,814	0/0:17,0:17:48.13:0,48,756	0/0:27,0:27:78.18:0,78,1141	0/0:17,0:17:51.17:0,51,808	0/0:30,0:30:90.31:0,90,1433	0/0:30,0:30:90.27:0,90,1384	0/0:34,0:34:99:0,102,1630	0/0:42,0:42:99:0,126,2009	0/0:22,0:22:60.19:0,60,936	0/0:19,0:19:57.09:0,57,820	0/0:24,0:24:66.21:0,66,1029	0/0:53,0:53:99:0,157,2413	0/0:20,0:20:60.20:0,60,955	0/0:16,0:16:36.12:0,36,572	0/0:21,0:21:63.17:0,63,978	0/0:18,0:18:54.13:0,54,801	0/0:26,0:26:72.23:0,72,1106	0/0:22,0:22:63.21:0,63,1005	0/0:17,0:17:51.17:0,51,805
chr10	20883961	.	CCT	C	2968.90	PASS	AB=0.819;AC=28;AF=0.538;AN=52;BaseQRankSum=-1.945;DP=494;FS=3.937;HRun=0;HaplotypeScore=69.8952;InbreedingCoeff=0.0983;MQ=27.74;MQ0=153;MQRankSum=5.079;QD=8.11;ReadPosRankSum=1.114;VQSLOD=3.0862;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:19,4:12:41.07:68,0,41	0/0:7,0:5:11.97:0,12,175	./.	./.	0/0:16,0:8:3.01:0,3,52	1/1:19,7:12:6:275,6,0	0/1:32,5:17:71.38:180,0,71	0/0:21,0:12:0.11:0,0,147	0/1:18,10:15:72.27:339,0,72	0/0:22,0:14:26.66:0,27,233	0/0:4,0:4:3.01:0,3,45	1/1:7,11:13:27.09:378,27,0	0/1:9,4:6:5.96:114,0,6	1/1:11,7:10:2.45:236,2,0	0/0:22,0:13:23.99:0,24,387	1/1:14,6:11:0.40:258,0,0	0/1:20,9:14:26.97:326,0,27	1/1:9,6:8:1.22:178,1,0	0/0:25,0:11:23.74:0,24,246	1/1:5,1:5:1.44:39,1,0	1/1:35,4:14:4.45:81,4,0	1/1:8,4:7:1.41:39,1,0	1/1:8,1:5:3.01:42,3,0	0/1:23,3:7:19.82:71,0,20	0/1:13,6:15:2.71:190,0,3	0/1:15,2:10:57.29:57,0,128	1/1:3,8:8:18.06:252,18,0	0/0:8,0:4:8.83:0,9,53
chr10	20883982	.	C	CTA	378.09	PASS	AB=0.985;AC=15;AF=0.313;AN=48;BaseQRankSum=5.558;DP=529;FS=15.646;HRun=0;HaplotypeScore=69.8939;InbreedingCoeff=-0.2378;MQ=19.45;MQ0=237;MQRankSum=-1.475;QD=1.53;ReadPosRankSum=1.995;VQSLOD=0.3895;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:7:3.44:0,3,27	0/0:6,0:4:9.03:0,9,129	./.	./.	./.	0/0:19,0:4:1.82:0,2,5	0/0:47,0:10:12.03:0,12,159	0/0:25,0:14:40.17:0,40,531	0/1:25,1:11:82.03:82,0,136	0/1:22,0:14:19.76:20,0,185	0/0:6,0:5:0:0,0,0	./.	0/1:18,0:4:19.69:28,0,20	0/1:19,0:7:18.47:59,0,18	0/0:26,0:12:11.90:0,12,184	0/1:17,1:6:10.20:115,0,10	0/1:23,0:8:10.06:10,0,131	0/0:21,0:7:1.01:0,1,90	0/1:24,0:12:36.91:37,0,284	1/1:5,0:3:1.55:4,2,0	0/0:56,1:15:4.41:0,4,16	0/1:10,0:6:3.22:3,0,14	0/0:9,0:4:0:0,0,1	0/1:28,0:6:26.48:26,0,79	1/1:19,0:9:0.35:9,0,0	0/1:24,2:14:83.73:84,0,257	0/1:9,0:4:24.58:25,0,30	0/0:6,0:2:3:0,3,26
chr10	20883983	.	TCTGC	T	771.69	PASS	AB=0.969;AC=25;AF=0.521;AN=48;BaseQRankSum=6.370;DP=528;FS=5.999;HRun=0;HaplotypeScore=69.3262;InbreedingCoeff=0.0416;MQ=18.98;MQ0=241;MQRankSum=-0.334;QD=2.28;ReadPosRankSum=2.476;VQSLOD=0.8720;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:7:2.91:0,3,41	0/0:6,0:4:8.99:0,9,104	./.	./.	./.	0/0:19,0:4:0.89:0,1,2	0/0:47,0:10:6.19:0,6,117	0/0:25,0:14:37.85:0,38,525	0/1:23,3:11:99:138,0,179	0/1:22,0:14:60.99:61,0,128	./.	0/0:20,1:9:0:0,0,0	1/1:16,2:4:5.04:57,5,0	1/1:18,1:7:6.02:104,6,0	0/0:25,0:11:10.17:0,10,198	1/1:15,3:6:11.99:154,12,0	0/1:20,3:8:57.51:89,0,58	0/1:21,1:7:15.74:32,0,16	0/1:24,0:12:73.99:74,0,259	1/1:5,0:3:2.90:16,3,0	0/1:57,1:14:0.58:1,0,9	1/1:10,0:6:1.45:9,1,0	0/1:9,0:4:0:0,0,0	0/1:27,0:6:42.45:42,0,76	1/1:18,0:8:0.40:5,0,0	0/1:25,0:13:66.90:67,0,124	1/1:7,2:4:3.01:52,3,0	1/1:6,0:2:1.82:5,2,0
chr10	20883985	.	TGC	T	173.41	PASS	AB=0.984;AC=14;AF=0.318;AN=44;BaseQRankSum=5.083;DP=495;FS=12.872;HRun=0;HaplotypeScore=59.8010;InbreedingCoeff=-0.0128;MQ=17.61;MQ0=241;MQRankSum=-1.807;QD=0.85;ReadPosRankSum=1.409;VQSLOD=0.1352;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:5:3.88:0,4,46	0/0:5,0:3:8.99:0,9,130	./.	./.	./.	0/0:17,0:2:1.55:0,2,4	0/0:47,0:10:12.03:0,12,155	0/0:24,0:13:38.41:0,38,607	0/1:24,0:10:60.94:61,0,163	0/1:19,1:13:8.42:8,0,167	./.	./.	0/1:18,0:4:19.58:26,0,20	0/1:17,0:5:16.93:57,0,17	0/0:26,0:12:14.86:0,15,216	1/1:15,0:4:9.02:45,9,0	0/1:21,0:6:3.74:4,0,110	0/0:19,0:4:4.89:0,5,93	0/1:22,2:12:18.48:18,0,305	0/0:5,0:3:0:0,0,0	0/0:59,0:13:3.16:0,3,10	1/1:6,1:3:2.14:39,2,0	./.	0/1:27,0:6:25.84:26,0,88	0/0:18,0:7:2.03:0,2,5	0/1:23,0:12:2.30:2,0,247	1/1:8,0:3:2.74:12,3,0	0/0:5,0:1:3:0,3,27
chr10	20883987	.	C	CCT	1093.03	PASS	AB=0.960;AC=22;AF=0.500;AN=44;BaseQRankSum=4.284;DP=483;FS=1.994;HRun=0;HaplotypeScore=58.9773;InbreedingCoeff=-0.0079;MQ=16.86;MQ0=239;MQRankSum=0.084;QD=3.84;ReadPosRankSum=1.434;VQSLOD=2.0555;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,1:5:2.61:0,3,40	0/0:4,0:2:6.02:0,6,78	./.	./.	./.	0/0:16,0:1:1.55:0,2,4	0/1:46,3:12:40.70:41,0,57	0/1:24,0:13:3.33:3,0,360	0/1:19,1:7:99:103,0,108	0/1:18,0:11:16.99:18,0,17	./.	./.	1/1:18,0:4:6.02:103,6,0	1/1:15,1:4:6.71:152,7,0	0/0:25,0:11:7.27:0,7,123	1/1:14,1:4:11.94:111,12,0	0/1:22,1:7:65.48:172,0,65	0/1:17,2:4:26.10:146,0,26	0/0:23,0:12:23.39:0,23,232	1/1:3,1:2:2.92:17,3,0	0/0:58,2:14:4.23:0,4,16	0/0:6,0:2:0.47:0,0,1	./.	0/1:26,1:6:35.21:45,0,35	1/1:16,1:6:1.39:5,1,0	0/1:22,1:12:62.61:239,0,63	1/1:7,0:2:2.97:20,3,0	1/1:5,0:1:3.01:53,3,0
chr10	20883989	.	TCTGC	T	995.25	PASS	AB=0.912;AC=21;AF=0.477;AN=44;BaseQRankSum=4.397;DP=490;FS=3.447;HRun=0;HaplotypeScore=58.7062;InbreedingCoeff=0.0294;MQ=16.55;MQ0=246;MQRankSum=-0.389;QD=3.74;ReadPosRankSum=2.052;VQSLOD=1.3352;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,1:5:2.91:0,3,42	0/0:5,0:2:6.02:0,6,78	./.	./.	./.	0/0:18,0:1:0.89:0,1,2	0/1:49,2:12:44.89:45,0,54	0/0:25,0:12:30.98:0,31,457	0/1:19,1:7:99:106,0,177	0/1:20,0:11:17.01:20,0,17	./.	./.	1/1:17,1:4:6.49:103,6,0	1/1:14,2:4:2.52:144,3,0	0/0:23,0:10:8.45:0,8,160	1/1:14,1:4:11.94:97,12,0	0/1:23,3:8:66.48:66,0,109	0/1:16,3:4:16.99:144,0,17	0/0:23,0:12:23.74:0,24,232	1/1:4,0:2:2.90:16,3,0	0/0:59,3:16:0.44:0,0,11	0/0:6,0:2:0.89:0,1,2	./.	0/1:23,4:6:42.50:44,0,43	1/1:16,1:5:3.01:38,3,0	0/1:17,4:10:71.65:236,0,72	1/1:6,1:2:2.97:20,3,0	1/1:4,1:1:3.01:52,3,0
chr10	20883995	.	TCTGC	T	683.62	PASS	AB=0.955;AC=21;AF=0.553;AN=38;BaseQRankSum=4.418;DP=468;FS=0.000;HRun=0;HaplotypeScore=60.4588;InbreedingCoeff=0.0151;MQ=15.80;MQ0=250;MQRankSum=-1.265;QD=2.22;ReadPosRankSum=1.824;VQSLOD=1.2598;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,1:4:3.01:0,3,43	./.	./.	./.	./.	./.	0/1:49,3:12:41.81:42,0,82	0/0:24,0:10:25.88:0,26,360	0/1:17,3:7:81.05:81,0,180	1/1:17,0:8:4.19:26,4,0	./.	./.	1/1:16,1:3:6.02:97,6,0	0/1:14,1:4:15.18:102,0,15	0/0:22,0:10:5.44:0,5,118	1/1:12,0:2:5.99:56,6,0	0/1:26,0:8:62.55:63,0,121	1/1:19,1:5:2.55:143,3,0	0/0:26,0:12:16.27:0,16,83	1/1:4,0:2:2.90:16,3,0	0/1:61,1:15:0.08:2,0,0	0/0:5,0:2:0.89:0,1,2	./.	0/1:24,0:6:23:40,0,23	1/1:15,1:3:2.84:14,3,0	0/1:17,1:9:37.18:75,0,37	./.	1/1:5,0:1:3.01:51,3,0
chr10	20884001	.	TCTGC	T	339.10	PASS	AB=0.952;AC=22;AF=0.611;AN=36;BaseQRankSum=3.583;DP=433;FS=4.360;HRun=0;HaplotypeScore=53.3756;InbreedingCoeff=0.0466;MQ=15.08;MQ0=238;MQRankSum=-0.527;QD=1.12;ReadPosRankSum=1.538;VQSLOD=0.7729;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:4:3.01:0,3,43	./.	./.	./.	./.	0/1:16,0:1:0:0,0,0	0/1:54,0:12:19.66:20,0,69	0/0:18,0:6:13.29:0,13,190	0/1:17,1:6:14.11:14,0,164	0/1:16,0:8:11.97:12,0,13	./.	./.	1/1:15,1:3:5.85:61,6,0	0/1:12,2:4:47.91:48,0,64	0/0:22,0:11:5.44:0,5,118	1/1:9,1:2:5.89:36,6,0	0/1:21,3:8:16.39:16,0,148	1/1:15,2:4:9.03:122,9,0	0/0:20,0:6:1.71:0,2,9	./.	1/1:59,2:13:0.02:2,0,0	./.	./.	1/1:21,3:6:0.54:3,1,0	1/1:16,0:2:3.01:49,3,0	1/1:13,0:5:1.24:25,1,0	./.	1/1:1,1:1:3.01:46,3,0
chr10	20884008	.	CTGCT	C	279.85	PASS	AB=0.966;AC=21;AF=0.583;AN=36;BaseQRankSum=2.549;DP=391;FS=7.791;HRun=0;HaplotypeScore=52.8748;InbreedingCoeff=0.1445;MQ=13.97;MQ0=219;MQRankSum=1.033;QD=1.25;ReadPosRankSum=1.206;VQSLOD=0.0505;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:2:2.99:0,3,23	./.	./.	./.	./.	1/1:12,1:1:3.01:44,3,0	0/0:46,1:10:2.69:0,3,60	0/0:14,0:3:6.01:0,6,60	0/1:16,1:6:0.93:1,0,88	0/1:13,0:6:13.26:30,0,13	./.	./.	1/1:15,0:3:2.99:23,3,0	0/1:11,1:3:17.56:18,0,20	0/0:16,0:8:5.88:0,6,122	1/1:10,0:2:3.01:38,3,0	0/0:22,3:7:6.08:0,6,82	0/1:18,0:5:14.06:22,0,14	1/1:26,0:4:8.93:67,9,0	./.	0/1:53,2:11:1.37:1,0,4	./.	./.	1/1:19,1:5:2.77:59,3,0	1/1:16,0:2:3.01:48,3,0	1/1:7,0:1:2.99:23,3,0	./.	1/1:2,0:1:3:25,3,0
chr10	20884011	.	CTTCT	C	167.49	PASS	AB=0.939;AC=10;AF=0.294;AN=34;BaseQRankSum=1.077;DP=362;FS=1.688;HRun=0;HaplotypeScore=45.4955;InbreedingCoeff=0.2423;MQ=13.74;MQ0=204;MQRankSum=0.346;QD=1.28;ReadPosRankSum=0.833;VQSLOD=1.3378;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:2:3:0,3,26	./.	./.	./.	./.	1/1:13,0:1:2.84:14,3,0	0/0:40,0:6:3.01:0,3,63	0/0:11,0:1:3.01:0,3,52	0/0:13,0:2:3.01:0,3,64	0/0:12,0:6:2.01:0,2,45	./.	./.	0/0:13,0:3:5.81:0,6,49	0/0:10,0:2:5.71:0,6,32	0/0:18,0:11:11.27:0,11,160	1/1:9,0:1:1.82:5,2,0	0/0:24,0:8:11.98:0,12,99	0/0:18,0:5:5.86:0,6,39	0/1:25,4:5:44.61:175,0,45	./.	0/1:49,0:10:1.08:1,0,5	./.	./.	1/1:17,0:5:2.76:26,3,0	1/1:14,0:1:3.01:49,3,0	./.	./.	0/0:2,0:1:2.84:0,3,14
chr10	20884031	.	TCTGC	T	97.46	PASS	AB=0.927;AC=7;AF=0.152;AN=46;BaseQRankSum=1.609;DP=382;FS=3.719;HRun=0;HaplotypeScore=49.4547;InbreedingCoeff=-0.0088;MQ=16.17;MQ0=188;MQRankSum=-1.981;QD=1.28;ReadPosRankSum=0.449;VQSLOD=1.3699;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:3:2.51:0,3,7	0/0:6,0:2:0.47:0,0,1	./.	./.	./.	0/0:12,0:4:8.62:0,9,96	0/0:39,0:6:6.49:0,6,121	0/1:11,0:2:13.22:27,0,13	0/1:13,0:5:10.80:11,0,92	0/1:13,1:5:30.17:30,0,36	./.	1/1:16,0:4:0.47:1,0,0	0/0:12,0:5:8.96:0,9,143	0/0:5,0:2:0:0,0,1	0/0:16,0:10:11.72:0,12,210	0/1:10,1:6:23.64:24,0,125	0/0:34,0:10:15.05:0,15,209	0/0:19,0:4:6.02:0,6,105	0/0:28,0:5:8.98:0,9,137	./.	0/0:50,0:10:6.67:0,7,35	0/0:6,0:3:0.94:0,1,1	0/0:4,0:1:2.97:0,3,20	0/0:22,0:8:2.82:0,3,17	0/1:8,3:6:24.40:109,0,24	0/0:11,0:6:10.74:0,11,133	0/0:6,0:3:6.02:0,6,80	0/0:6,0:2:3.90:0,4,64
chr10	20884037	.	TCTGC	T	216.33	PASS	AB=0.954;AC=10;AF=0.217;AN=46;BaseQRankSum=-0.458;DP=386;FS=6.473;HRun=0;HaplotypeScore=50.2605;InbreedingCoeff=0.0355;MQ=16.30;MQ0=192;MQRankSum=1.214;QD=1.68;ReadPosRankSum=2.534;VQSLOD=0.4468;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:3:1.72:0,2,4	0/0:5,0:2:0:0,0,0	./.	./.	./.	0/1:11,1:4:49.46:51,0,49	0/0:40,0:8:6.96:0,7,121	1/1:13,0:3:2.99:34,3,0	0/0:11,1:6:11.93:0,12,146	0/0:9,0:3:0.72:0,1,24	./.	0/0:15,1:3:2.19:0,2,19	0/0:11,0:5:5.92:0,6,84	1/1:4,1:2:3.01:49,3,0	0/1:16,0:9:16.29:16,0,90	0/1:10,2:7:84.04:103,0,84	0/0:42,1:12:18.05:0,18,228	0/0:19,0:4:6.02:0,6,105	0/0:27,0:4:8.89:0,9,98	./.	0/1:45,3:9:0.51:44,0,1	0/0:6,0:4:0.94:0,1,1	0/0:4,0:1:2.04:0,2,6	0/0:22,1:8:2.90:0,3,27	0/1:12,0:7:25.68:26,0,31	0/1:11,0:6:9.59:10,0,78	0/0:6,0:3:6.02:0,6,83	0/0:6,0:2:3.01:0,3,62
chr10	20884055	.	C	CCT	339.73	PASS	AB=0.957;AC=16;AF=0.381;AN=42;BaseQRankSum=-0.273;DP=427;FS=6.248;HRun=0;HaplotypeScore=50.4363;InbreedingCoeff=0.0229;MQ=15.61;MQ0=238;MQRankSum=-0.039;QD=1.95;ReadPosRankSum=-1.518;VQSLOD=0.4503;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:3:0.47:1,0,0	0/0:5,0:2:0.89:0,1,2	./.	./.	./.	0/1:12,0:4:29.89:73,0,30	0/0:65,0:12:8.62:0,9,96	0/1:12,0:4:19.15:19,0,60	0/0:11,0:6:15.50:0,16,185	./.	./.	0/0:11,0:5:7.59:0,8,42	0/1:8,1:3:44.83:45,0,74	1/1:5,0:1:3.01:33,3,0	0/1:13,3:9:46.07:108,0,46	0/1:13,0:8:85.11:85,0,140	0/0:46,0:13:19.29:0,19,223	0/0:27,0:4:6.49:0,6,80	./.	1/1:5,0:3:1.25:3,1,0	1/1:65,0:9:4.26:41,4,0	1/1:5,0:5:0.27:1,0,0	./.	0/0:33,2:8:0:0,0,1	0/0:9,0:6:2.98:0,3,22	0/1:9,0:7:48.85:49,0,93	0/0:5,0:3:6.02:0,6,83	0/0:5,0:1:3.01:0,3,41
chr10	20884057	.	TCTGC	T	342.05	PASS	AB=0.953;AC=13;AF=0.310;AN=42;BaseQRankSum=-0.669;DP=434;FS=6.246;HRun=0;HaplotypeScore=48.3429;InbreedingCoeff=0.0015;MQ=15.35;MQ0=249;MQRankSum=0.821;QD=1.87;ReadPosRankSum=-0.091;VQSLOD=0.2902;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:3:0.47:0,0,1	0/0:5,0:2:0.89:0,1,2	./.	./.	./.	0/1:11,1:4:29.88:80,0,30	0/0:65,1:12:9.84:0,10,98	0/1:12,0:4:10.89:11,0,25	0/0:11,0:6:16.03:0,16,168	./.	./.	0/0:11,0:5:4.63:0,5,25	0/1:8,0:3:43.37:43,0,74	1/1:6,0:1:3.01:37,3,0	0/1:16,0:9:41.55:99,0,42	0/1:12,1:8:99:104,0,123	0/0:45,1:13:21.27:0,21,220	0/0:28,0:4:9.03:0,9,116	./.	1/1:5,0:3:1.25:3,1,0	1/1:64,3:9:1.38:35,1,0	0/0:5,0:5:1.30:0,1,2	./.	0/1:35,0:8:0.55:1,0,1	0/0:8,0:5:2.90:0,3,16	0/1:7,2:7:42.59:43,0,82	0/0:4,1:3:6.02:0,6,79	0/0:5,0:1:3.01:0,3,41
chr10	20884154	.	C	CGG	920.92	PASS	AB=0.894;AC=12;AF=0.214;AN=56;BaseQRankSum=0.070;DP=555;FS=6.227;HRun=0;HaplotypeScore=57.6794;InbreedingCoeff=-0.1279;MQ=28.43;MQ0=151;MQRankSum=-2.378;QD=4.90;ReadPosRankSum=-0.132;VQSLOD=1.2610;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:12:16.30:0,16,238	0/1:5,1:4:27.34:55,0,27	0/1:29,3:6:99:103,0,114	0/0:32,1:8:7.04:0,7,92	0/0:6,0:4:3.01:0,3,41	0/0:9,0:2:3.01:0,3,40	0/0:58,0:18:17.89:0,18,272	1/1:10,5:5:15.05:304,15,0	0/1:24,1:15:48.88:49,0,307	0/1:13,2:9:76.60:77,0,164	0/1:4,1:4:42.94:53,0,43	0/0:20,0:12:16.87:0,17,240	0/0:11,0:4:12.04:0,12,196	0/0:11,0:6:15.05:0,15,233	0/0:8,0:6:9.92:0,10,148	0/1:14,3:12:99:117,0,250	0/0:26,0:13:21.54:0,22,343	0/0:22,0:13:17.32:0,17,299	0/1:33,3:6:36.43:170,0,36	0/1:11,1:11:4.73:5,0,33	0/0:64,6:28:8.35:0,8,112	0/0:8,1:6:2.36:0,2,40	0/1:10,0:4:14.60:36,0,15	0/0:32,0:15:13.34:0,13,241	0/0:12,1:9:9.50:0,10,148	0/1:12,2:7:99:103,0,166	0/0:9,0:7:12.04:0,12,196	0/0:10,0:5:9.03:0,9,141
chr10	20884167	.	CCT	C	30.41	PASS	AB=0.901;AC=8;AF=0.160;AN=50;BaseQRankSum=1.766;DP=513;FS=23.095;HRun=0;HaplotypeScore=48.0171;InbreedingCoeff=-0.1176;MQ=22.37;MQ0=165;MQRankSum=-0.151;QD=0.30;ReadPosRankSum=-1.035;VQSLOD=0.0172;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:21,1:9:26.19:26,0,61	./.	0/0:9,0:3:2.18:0,2,53	0/0:11,0:3:1.55:0,2,4	./.	0/0:10,0:1:2.94:0,3,18	0/0:62,0:24:21:0,21,292	0/0:14,0:3:6.02:0,6,93	0/0:18,2:10:14.94:0,15,179	1/1:12,0:5:0.47:1,0,0	0/0:6,0:5:3.01:0,3,53	0/0:17,1:11:6.02:0,6,91	0/0:10,1:3:9.03:0,9,140	0/1:13,1:5:32.88:33,0,95	0/0:10,0:6:9.03:0,9,156	0/1:18,3:12:20.85:21,0,249	0/0:23,2:12:23:0,23,377	0/0:24,0:13:21.07:0,21,367	0/0:34,0:3:5.98:0,6,72	0/0:12,0:11:4.97:0,5,67	0/0:59,4:24:9.26:0,9,124	./.	0/1:10,1:5:7.31:7,0,47	0/0:33,1:16:11.89:0,12,203	0/0:13,0:8:5.47:0,5,102	0/1:13,0:6:23.05:23,0,110	0/1:5,3:6:32.51:33,0,96	0/0:10,0:6:11.96:0,12,172
chr10	20884277	.	CCT	C	1819.31	PASS	AB=0.750;AC=25;AF=0.481;AN=52;BaseQRankSum=2.063;DP=384;FS=25.964;HRun=0;HaplotypeScore=33.6491;InbreedingCoeff=-0.1282;MQ=26.00;MQ0=132;MQRankSum=-0.851;QD=6.81;ReadPosRankSum=-2.078;VQSLOD=1.0287;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:13,5:7:5.60:83,6,0	0/0:5,0:3:6.02:0,6,91	./.	0/0:18,0:3:9.03:0,9,161	0/0:6,0:3:6.02:0,6,108	0/1:8,6:6:41.83:114,0,42	0/1:30,6:13:99:108,0,110	0/1:7,4:7:35.22:137,0,35	0/1:8,5:7:75.88:110,0,76	0/0:15,0:5:9.03:0,9,156	0/0:6,0:3:3.01:0,3,54	0/1:9,3:6:26.96:114,0,27	1/1:8,4:6:7.81:124,8,0	0/1:3,5:5:20.73:152,0,21	0/0:9,0:6:18.06:0,18,324	0/1:7,2:7:72.24:72,0,87	0/1:9,7:10:82.65:168,0,83	0/1:3,6:8:32.50:226,0,33	0/0:36,0:5:15.05:0,15,255	./.	0/1:36,10:18:35.21:35,0,40	1/1:5,3:4:3.01:42,3,0	1/1:3,3:5:5.12:49,5,0	0/1:11,5:8:0:0,0,0	0/1:12,2:6:57.56:72,0,58	0/1:6,3:4:23.05:113,0,23	1/1:1,6:6:18.06:251,18,0	1/1:3,0:2:1.25:3,1,0
chr10	20884735	.	TTA	T	4527.40	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-0.246;DP=455;FS=7.205;HRun=0;HaplotypeScore=70.6275;InbreedingCoeff=0.8926;MQ=65.75;MQ0=0;MQRankSum=-0.178;QD=15.04;ReadPosRankSum=-1.901;VQSLOD=3.5493;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:25,2:27:63.27:523,63,0	0/0:7,0:7:20.99:0,21,286	0/0:11,0:9:6.48:0,6,187	0/0:16,0:11:3.26:0,3,226	0/0:24,0:24:42.15:0,42,798	1/1:12,1:13:32.81:243,33,0	1/1:16,3:19:39.07:407,39,0	0/0:31,0:30:84.39:0,84,877	1/1:12,0:12:25.55:166,26,0	0/0:16,1:17:43.73:0,44,572	0/0:16,0:16:47.89:0,48,604	1/1:13,0:13:4.82:31,5,0	1/1:8,1:8:16.55:131,17,0	1/1:15,3:17:44.85:356,45,0	0/0:15,0:15:42.06:0,42,539	1/1:7,0:7:8.63:69,9,0	1/1:26,1:27:29.33:197,29,0	1/1:15,0:15:28.84:159,29,0	0/0:17,0:17:45.07:0,45,577	1/1:10,4:14:30.29:324,30,0	1/1:15,1:16:12.81:125,13,0	1/1:15,1:16:34.31:244,34,0	1/1:17,1:18:40.78:319,41,0	1/1:11,2:13:33.18:240,33,0	1/1:12,0:12:3.68:60,4,0	1/1:17,4:21:57.21:526,57,0	1/1:13,1:14:11.78:96,12,0	1/1:16,1:17:28.06:312,28,0
chr10	20884736	.	TA	T	6458.62	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-3.126;DP=449;FS=10.971;HRun=1;HaplotypeScore=56.0024;InbreedingCoeff=0.9630;MQ=65.79;MQ0=0;MQRankSum=3.114;QD=21.67;ReadPosRankSum=-2.381;VQSLOD=3.1959;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:22,6:28:71.66:646,72,0	0/0:7,0:7:20.09:0,20,211	0/0:11,0:9:12.53:0,13,158	0/0:16,0:11:18:0,18,190	0/0:23,0:23:39.29:0,39,591	1/1:7,6:13:34.77:334,35,0	1/1:17,2:19:53.58:471,54,0	0/0:32,0:31:83.79:0,84,648	1/1:8,4:12:35.01:326,35,0	0/0:16,0:16:27.90:0,28,427	0/0:16,0:16:46.68:0,47,456	1/1:0,12:12:6:53,6,0	1/1:5,3:7:19.43:172,19,0	1/1:16,2:17:51.02:485,51,0	0/0:15,0:15:41.89:0,42,399	1/1:3,4:7:19.60:223,20,0	1/1:1,26:27:30.09:395,30,0	1/1:12,2:14:40.39:348,40,0	0/0:15,0:15:45.07:0,45,464	1/1:10,4:14:40.43:359,40,0	1/1:1,15:16:13.38:140,13,0	1/1:4,12:16:40.22:323,40,0	1/1:13,5:18:52.33:522,52,0	1/1:13,0:13:38.02:335,38,0	1/1:3,9:12:12.93:120,13,0	1/1:18,3:21:62.39:570,62,0	1/1:1,12:13:12.03:151,12,0	1/1:11,6:17:47.84:486,48,0
chr10	20884740	.	T	TA	587.83	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=1.537;DP=462;FS=0.723;HRun=0;HaplotypeScore=78.2580;InbreedingCoeff=0.8543;MQ=67.38;MQ0=1;MQRankSum=-3.912;QD=18.37;ReadPosRankSum=-0.277;VQSLOD=5.1704;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:78.42:0,78,637	0/0:8,0:8:24.06:0,24,300	0/0:14,0:9:26.65:0,27,230	0/0:18,0:13:24.06:0,24,237	0/0:23,0:23:65.70:0,66,748	0/0:13,0:13:37.39:0,37,302	0/0:19,0:19:51.04:0,51,465	1/1:9,23:31:69.93:683,70,0	0/0:13,0:13:37.81:0,38,324	0/0:16,0:16:45.10:0,45,557	0/0:15,0:15:45.12:0,45,590	0/0:11,0:11:6:0,6,53	0/0:10,0:9:23.99:0,24,215	0/0:16,0:15:45:0,45,408	0/0:17,0:17:45.47:0,45,519	0/0:8,0:8:24.04:0,24,234	0/0:27,0:27:30.04:0,30,284	0/0:14,0:14:41.94:0,42,358	0/0:16,0:16:48.08:0,48,524	0/0:16,0:16:43.95:0,44,381	0/0:15,0:15:14.45:0,14,117	0/0:15,0:15:41.57:0,42,315	0/0:18,0:18:51.51:0,52,482	0/0:13,0:13:38.93:0,39,334	0/0:14,0:14:19.77:0,20,176	0/0:21,0:21:59.05:0,59,521	0/0:13,0:13:12.02:0,12,114	0/0:18,0:18:54.02:0,54,507
chr10	20884743	.	T	TA	452.36	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.577;DP=460;FS=3.539;HRun=0;HaplotypeScore=79.9496;InbreedingCoeff=0.8648;MQ=68.28;MQ0=1;MQRankSum=-2.542;QD=15.60;ReadPosRankSum=1.809;VQSLOD=5.1999;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:75.16:0,75,613	0/0:8,0:8:24.05:0,24,300	0/0:15,0:10:29.60:0,30,261	0/0:18,0:13:25.28:0,25,247	0/0:23,0:23:65.91:0,66,736	0/0:14,0:14:40.37:0,40,325	0/0:17,0:17:46.35:0,46,414	1/1:6,23:28:82.12:547,82,0	0/0:13,0:13:37.80:0,38,322	0/0:16,0:16:42.12:0,42,539	0/0:17,0:17:51.13:0,51,645	0/0:10,0:10:6.01:0,6,55	0/0:10,0:9:26.92:0,27,228	0/0:16,0:15:44.99:0,45,400	0/0:17,0:17:47.91:0,48,547	0/0:8,0:8:24.03:0,24,233	0/0:25,0:25:30.03:0,30,281	0/0:14,0:14:38.99:0,39,339	0/0:17,0:17:48.10:0,48,531	0/0:16,0:16:43.97:0,44,384	0/0:14,0:14:17.32:0,17,136	0/0:14,0:14:35.67:0,36,278	0/0:18,0:18:51.52:0,52,485	0/0:14,0:14:38.97:0,39,340	0/0:14,0:14:23.90:0,24,215	0/0:22,0:22:58.65:0,59,513	0/0:12,0:12:12.01:0,12,113	0/0:22,0:22:66:0,66,604
chr10	20885299	.	GGTGTGTGTGTGT	G	7909.83	PASS	AB=0.788;AC=35;AF=0.625;AN=56;BaseQRankSum=5.277;DP=630;FS=1.985;HRun=0;HaplotypeScore=199.4037;InbreedingCoeff=0.4385;MQ=48.79;MQ0=27;MQRankSum=-7.394;QD=16.83;ReadPosRankSum=1.784;VQSLOD=3.6040;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:26,10:36:27.42:682,27,0	0/0:2,0:2:3.01:0,3,147	0/0:41,0:13:3.01:0,3,72	0/0:43,0:14:9.03:0,9,207	0/0:5,0:11:9.03:0,9,352	1/1:14,5:17:9.02:313,9,0	1/1:19,12:31:8.13:266,8,0	1/1:31,0:29:4.78:25,5,0	1/1:15,6:22:17.60:520,18,0	0/0:15,0:17:21.54:0,22,560	0/0:5,0:8:8.91:0,9,180	1/1:10,15:25:30.06:828,30,0	1/1:9,9:19:17.78:577,18,0	1/1:13,13:27:24.08:813,24,0	0/0:22,0:23:57.20:0,57,2354	0/1:14,0:20:80.11:151,0,80	0/1:30,1:42:99:289,0,141	0/1:15,2:19:99:264,0,170	0/0:13,0:14:20.73:0,21,444	1/1:5,7:11:15.01:436,15,0	0/1:23,9:29:87.89:105,0,88	1/1:10,7:16:14.96:352,15,0	1/1:3,3:6:2.54:104,3,0	1/1:26,13:39:38.83:1025,39,0	1/1:8,4:12:12.04:376,12,0	0/1:20,4:24:99:326,0,165	1/1:14,3:14:12.04:356,12,0	1/1:8,2:10:3.01:104,3,0
chr10	20886636	.	TC	T	602.98	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.539;DP=668;FS=0.809;HRun=6;HaplotypeScore=64.6775;InbreedingCoeff=0.9824;MQ=84.05;MQ0=0;MQRankSum=-0.846;QD=22.33;ReadPosRankSum=-3.087;VQSLOD=2.1055;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,114,1485	0/0:10,0:10:24.07:0,24,302	0/0:23,0:23:48.10:0,48,573	0/0:19,0:20:43.93:0,44,532	0/0:23,0:23:66.21:0,66,863	0/0:15,0:15:45.12:0,45,559	0/0:40,0:40:99:0,111,1405	1/1:3,24:27:66.14:698,66,0	0/0:22,0:22:60.18:0,60,776	0/0:26,0:26:76.13:0,76,981	0/0:21,0:21:63.18:0,63,799	0/0:18,0:18:48.12:0,48,598	0/0:20,0:20:57.16:0,57,719	0/0:14,0:14:39.11:0,39,485	0/0:21,0:21:60.19:0,60,788	0/0:15,0:15:39.12:0,39,492	0/0:34,0:34:99:0,99,1292	0/0:20,0:20:60.20:0,60,789	0/0:27,0:27:75.24:0,75,974	0/0:22,0:22:63.14:0,63,755	0/0:56,0:56:99:0,165,2094	0/0:22,0:22:53.99:0,54,656	0/0:26,0:26:72.19:0,72,899	0/0:27,0:27:75.23:0,75,970	0/0:23,0:23:66.19:0,66,840	0/0:23,0:23:63.14:0,63,794	0/0:27,0:27:81.25:0,81,1049	0/0:5,0:5:15.05:0,15,195
chr10	20887241	.	C	CA	4062.23	PASS	AB=0.637;AC=28;AF=0.500;AN=56;BaseQRankSum=-7.998;DP=605;FS=0.892;HRun=13;HaplotypeScore=75.5912;InbreedingCoeff=0.0066;MQ=75.84;MQ0=2;MQRankSum=-0.462;QD=8.74;ReadPosRankSum=-1.899;VQSLOD=2.5108;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,22:31:31.05:391,31,0	0/0:0,0:7:14.26:0,14,41	0/1:24,0:19:1.94:2,0,68	0/0:14,0:13:2.72:0,3,61	0/0:10,0:29:19.99:0,20,59	1/1:7,14:24:1.89:272,2,0	1/1:3,17:21:8.61:248,9,0	1/1:15,0:28:45.63:239,46,0	0/1:4,18:22:7.74:193,0,8	0/0:9,0:25:33.77:0,34,109	0/0:3,0:16:18.28:0,18,53	0/1:9,10:19:15.70:118,0,16	1/1:7,10:18:11.97:103,12,0	0/1:3,7:10:26.28:68,0,26	0/0:27,0:29:51.52:0,52,338	0/1:7,9:17:29.95:67,0,30	0/1:12,17:31:26.71:224,0,27	0/1:6,14:20:8.70:193,0,9	0/0:8,0:19:19.52:0,20,56	0/1:9,20:29:13.99:334,0,14	0/1:7,11:18:17.14:143,0,17	0/1:4,13:17:17.14:143,0,17	1/1:6,16:23:41.89:377,42,0	0/1:13,26:40:37:394,0,37	0/1:3,11:15:36.24:64,0,36	0/1:10,12:22:0.98:257,0,1	0/1:13,15:28:17.15:140,0,17	1/1:0,5:7:8.01:92,8,0
chr10	20887514	.	AC	A	700.17	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-2.938;DP=638;FS=0.707;HRun=7;HaplotypeScore=122.2393;InbreedingCoeff=0.8865;MQ=71.94;MQ0=2;MQRankSum=2.128;QD=21.88;ReadPosRankSum=-4.397;VQSLOD=1.1189;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:57.10:0,57,696	0/0:9,0:9:23.98:0,24,265	0/0:35,0:31:50.07:0,50,705	0/0:34,0:26:35.57:0,36,610	0/0:23,0:23:63.19:0,63,776	0/0:18,0:17:42.05:0,42,504	0/0:29,0:29:63.06:0,63,761	1/1:5,27:32:81.12:795,81,0	0/0:17,0:17:36.07:0,36,435	0/0:32,0:32:78.14:0,78,943	0/0:17,0:17:51.03:0,51,619	0/0:19,0:19:42.13:0,42,526	0/0:18,0:18:48.08:0,48,560	0/0:21,0:21:42.13:0,42,528	0/0:30,0:30:81.22:0,81,988	0/0:31,0:31:72.22:0,72,887	0/0:29,0:29:69.22:0,69,866	0/0:18,0:18:33.07:0,33,398	0/0:20,0:20:45.11:0,45,548	0/0:22,0:22:57.17:0,57,704	0/0:16,0:16:27.09:0,27,340	0/0:23,0:23:63.08:0,63,756	0/0:25,0:25:60.18:0,60,743	0/0:29,0:29:78.13:0,78,949	0/0:15,0:15:36.11:0,36,447	0/0:17,0:17:45.14:0,45,565	0/0:26,0:26:57.09:0,57,694	0/0:5,0:5:5.08:0,5,107
chr10	20887531	.	AAACAAC	A	4891.69	PASS	AB=0.774;AC=45;AF=0.900;AN=50;BaseQRankSum=2.171;DP=623;FS=0.000;HRun=0;HaplotypeScore=160.3486;InbreedingCoeff=0.4770;MQ=63.44;MQ0=6;MQRankSum=-7.209;QD=10.52;ReadPosRankSum=0.361;VQSLOD=3.8158;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:14,9:23:12.04:172,12,0	1/1:3,0:10:15.05:209,15,0	./.	./.	1/1:16,0:23:3.01:42,3,0	1/1:7,8:14:12.04:240,12,0	1/1:18,7:26:9.03:170,9,0	./.	1/1:10,6:16:9.03:180,9,0	1/1:16,0:28:19.89:255,20,0	1/1:14,0:22:12.04:151,12,0	1/1:11,6:17:15.05:277,15,0	1/1:11,10:22:27.09:521,27,0	1/1:13,8:21:9.03:180,9,0	0/0:32,0:33:54.12:0,54,1641	1/1:17,13:30:15.05:288,15,0	1/1:18,9:26:12.04:240,12,0	1/1:13,6:18:12.04:240,12,0	1/1:13,0:16:3.01:42,3,0	1/1:14,9:23:24:356,24,0	1/1:9,5:14:3.01:54,3,0	1/1:13,4:18:18.06:313,18,0	0/1:17,0:23:27.31:27,0,89	0/0:15,0:33:47.23:0,47,349	1/1:9,5:14:6.02:120,6,0	1/1:12,5:16:15.04:243,15,0	1/1:16,16:32:27.06:509,27,0	1/1:5,2:7:4.57:64,5,0
chr10	20887814	.	CAT	C	3473.44	PASS	AB=0.993;AC=27;AF=0.482;AN=56;BaseQRankSum=12.702;DP=826;FS=9.656;HRun=0;HaplotypeScore=139.7778;InbreedingCoeff=-0.5798;MQ=57.64;MQ0=21;MQRankSum=0.739;QD=5.16;ReadPosRankSum=11.098;VQSLOD=0.5629;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:44,0:44:71.69:265,0,72	1/1:10,0:10:22.10:110,22,0	0/0:58,0:14:12.99:0,13,121	0/0:64,0:11:4.88:0,5,74	0/1:25,0:24:23.12:121,0,23	0/1:25,0:24:84.19:84,0,103	0/1:22,0:22:99:101,0,190	0/1:32,1:32:98.14:98,0,208	0/1:31,1:32:54.88:199,0,55	0/1:38,0:37:99:188,0,106	1/1:21,0:21:10.74:111,11,0	0/1:23,1:24:0.63:137,0,1	0/1:18,0:18:68.15:97,0,68	0/1:31,0:31:99:118,0,143	0/0:31,0:31:82.42:0,82,1473	0/1:36,1:37:99:180,0,132	0/1:23,0:23:66.97:126,0,67	0/1:20,0:20:75.45:103,0,75	0/1:26,0:23:80.30:80,0,112	0/1:23,0:23:60.68:122,0,61	0/1:36,0:36:99:115,0,153	0/1:27,0:27:85.76:86,0,145	0/1:26,0:26:21.84:145,0,22	0/1:48,0:48:99:293,0,140	0/1:26,0:26:3.05:156,0,3	0/1:23,0:23:0.74:187,0,1	0/1:27,1:28:75.36:224,0,75	0/1:7,0:7:28.88:29,0,31
chr10	20887816	.	TAC	T	13934.33	PASS	AB=0.587;AC=49;AF=0.875;AN=56;BaseQRankSum=5.871;DP=815;FS=9.521;HRun=0;HaplotypeScore=105.0213;InbreedingCoeff=0.8432;MQ=57.03;MQ0=22;MQRankSum=2.040;QD=21.05;ReadPosRankSum=2.835;VQSLOD=4.9227;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,33:43:86.83:1000,87,0	1/1:0,10:10:24.07:283,24,0	0/0:56,0:13:14.63:0,15,142	0/0:64,0:11:6.02:0,6,94	1/1:4,19:22:42.12:494,42,0	1/1:9,17:25:35.94:402,36,0	1/1:11,10:21:30.09:353,30,0	1/1:17,13:31:39.25:417,39,0	1/1:9,22:31:57.17:669,57,0	1/1:11,26:37:80.87:916,81,0	1/1:1,20:21:36.11:424,36,0	1/1:3,17:22:40.44:522,40,0	1/1:4,12:17:38.95:438,39,0	1/1:10,22:32:47.88:542,48,0	0/0:31,1:32:45.93:0,46,1165	1/1:6,23:34:33.63:745,34,0	1/1:7,16:23:42.12:494,42,0	1/1:6,13:20:38.54:412,39,0	1/1:12,13:23:23.20:424,23,0	1/1:6,15:23:47.81:523,48,0	1/1:11,23:36:47.80:543,48,0	0/1:8,18:26:1.80:415,0,2	1/1:5,19:25:47.88:542,48,0	1/1:10,36:47:99:1250,108,0	1/1:3,23:27:57:650,57,0	1/1:3,20:23:60.88:672,61,0	1/1:7,20:28:18.54:650,19,0	1/1:2,4:7:14.88:155,15,0
chr10	20889513	.	A	ATGTG	9347	PASS	AB=0.713;AC=45;AF=0.804;AN=56;BaseQRankSum=-2.090;DP=707;FS=5.063;HRun=0;HaplotypeScore=135.2653;InbreedingCoeff=0.1593;MQ=67.45;MQ0=6;MQRankSum=-0.198;QD=14.49;ReadPosRankSum=-2.673;VQSLOD=3.7464;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:12,20:32:1.57:483,0,2	0/1:5,0:14:29.15:54,0,29	0/1:30,0:22:14.63:15,0,25	0/0:22,0:12:2.69:0,3,8	0/1:12,0:27:25.26:25,0,38	0/1:5,13:18:3.21:344,0,3	1/1:9,12:21:12.04:290,12,0	1/1:43,0:37:29.44:387,29,0	1/1:13,14:29:17.99:380,18,0	1/1:10,0:23:24.41:163,24,0	0/1:8,0:24:54.94:145,0,55	1/1:7,10:18:20.81:407,21,0	1/1:6,15:22:26.83:592,27,0	1/1:5,9:19:26.55:484,27,0	0/0:36,0:40:87.11:0,87,1113	1/1:6,19:27:23.12:397,23,0	1/1:6,18:25:27.05:599,27,0	1/1:9,9:19:11.71:262,12,0	0/1:21,0:22:40.09:40,0,75	1/1:7,15:23:14.54:299,15,0	1/1:14,21:42:35.34:746,35,0	1/1:5,9:15:8.71:217,9,0	1/1:4,18:22:8.82:217,9,0	1/1:8,23:33:35.86:810,36,0	1/1:12,16:27:26.49:589,26,0	1/1:16,8:25:35.93:590,36,0	1/1:19,4:26:49.93:597,50,0	1/1:6,7:14:9.03:217,9,0
chr10	20889539	.	GTA	G	240.74	PASS	AB=0.903;AC=4;AF=0.071;AN=56;BaseQRankSum=-0.839;DP=668;FS=13.150;HRun=0;HaplotypeScore=119.1339;InbreedingCoeff=-0.0787;MQ=57.60;MQ0=15;MQRankSum=-2.709;QD=2.38;ReadPosRankSum=-1.640;VQSLOD=1.1933;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:35.96:0,36,356	0/0:16,0:15:35.95:0,36,335	0/0:16,0:5:11.83:0,12,96	0/0:32,0:8:14.33:0,14,95	0/0:25,1:25:32.78:0,33,307	0/0:21,0:21:38.86:0,39,375	0/0:20,0:20:27.01:0,27,259	0/0:47,0:40:44.06:0,44,571	0/0:23,0:23:29.62:0,30,315	0/1:26,1:24:99:116,0,437	0/0:29,0:29:71.96:0,72,679	0/0:16,0:16:29.98:0,30,286	0/0:25,0:25:48.03:0,48,466	0/0:20,0:20:34.31:0,34,381	0/0:33,0:33:58.34:0,58,1343	0/0:34,1:35:16.87:0,17,498	0/0:22,0:21:12.04:0,12,264	0/0:17,0:17:13.30:0,13,196	0/1:11,7:18:99:207,0,159	0/1:21,1:22:14.72:15,0,210	0/1:33,1:34:0.73:1,0,412	0/0:15,0:15:23.05:0,23,207	0/0:19,0:19:24.02:0,24,249	0/0:27,1:28:45.97:0,46,495	0/0:21,1:21:4.04:0,4,431	0/0:19,0:19:57:0,57,568	0/0:28,0:28:36.36:0,36,616	0/0:9,0:9:12.02:0,12,126
chr10	20890202	.	TACACACACACACACACAC	T	4608.94	PASS	AC=38;AF=0.704;AN=54;BaseQRankSum=3.625;DP=548;FS=0.000;HRun=0;HaplotypeScore=202.3468;InbreedingCoeff=0.6747;MQ=56.44;MQ0=26;MQRankSum=-2.375;QD=11.38;ReadPosRankSum=3.253;VQSLOD=3.6908;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:32,14:42:15.05:485,15,0	./.	0/0:22,0:17:6.02:0,6,103	0/0:26,0:18:3.01:0,3,55	0/0:10,0:12:12.04:0,12,468	1/1:5,7:13:6.02:203,6,0	1/1:20,0:19:8.98:144,9,0	0/0:20,0:19:18.03:0,18,393	1/1:13,6:20:6.02:231,6,0	0/0:16,0:17:29.13:0,29,793	0/0:7,0:8:9.03:0,9,300	1/1:10,7:16:5.99:186,6,0	1/1:8,7:13:8.85:300,9,0	1/1:5,11:16:1.05:137,1,0	0/0:18,0:18:39.13:0,39,2105	1/1:7,9:15:6.02:278,6,0	1/1:16,14:29:12.04:335,12,0	1/1:14,14:26:9.02:247,9,0	0/0:9,0:9:12.02:0,12,198	1/1:10,6:17:11.99:233,12,0	1/1:69,0:64:24.22:477,24,0	1/1:5,6:11:6.26:175,6,0	1/1:4,4:8:3.01:122,3,0	1/1:19,18:34:3.08:146,3,0	1/1:6,3:8:0.47:1,0,0	1/1:5,9:13:22.29:391,22,0	1/1:9,2:11:6.02:121,6,0	1/1:4,2:5:9.03:398,9,0
chr10	20890893	.	CCCAT	C	1778.54	PASS	AB=1.000;AC=15;AF=0.341;AN=44;BaseQRankSum=8.525;DP=677;FS=1.433;HRun=0;HaplotypeScore=106.3414;InbreedingCoeff=0.8272;MQ=52.59;MQ0=59;MQRankSum=0.364;QD=9.94;ReadPosRankSum=-0.920;VQSLOD=2.9073;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:35:42.14:0,42,926	0/0:4,0:4:2.97:0,3,20	./.	./.	0/1:6,0:5:0.08:0,0,0	0/0:20,0:20:12.04:0,12,245	0/0:34,0:32:12.51:0,13,273	./.	0/0:30,0:29:39.13:0,39,829	./.	./.	0/0:35,0:34:36.12:0,36,788	0/0:24,0:22:27.09:0,27,619	0/0:23,0:21:21.07:0,21,411	1/1:18,12:29:15.05:227,15,0	1/1:25,15:39:39.13:591,39,0	1/1:17,13:30:18.06:271,18,0	1/1:16,15:31:24.08:364,24,0	./.	0/0:7,0:5:9.03:0,9,205	0/0:68,0:59:59.99:0,60,1211	0/0:4,0:3:6.01:0,6,87	0/0:16,0:13:9.03:0,9,175	0/0:25,0:25:24.07:0,24,471	0/0:19,0:13:27.09:0,27,611	1/1:13,7:18:21.07:311,21,0	1/1:16,3:17:9.03:137,9,0	1/1:2,1:3:3.01:45,3,0
chr10	20891550	.	TC	T	2910.21	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=10.002;DP=721;FS=11.472;HRun=1;HaplotypeScore=70.0257;InbreedingCoeff=0.9986;MQ=78.17;MQ0=0;MQRankSum=0.771;QD=35.93;ReadPosRankSum=-1.003;VQSLOD=2.5492;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:58:99:0,175,2750	1/1:0,10:10:30.10:419,30,0	0/0:12,0:12:26.68:0,27,376	0/0:20,0:20:57.18:0,57,858	1/1:0,25:25:72.11:940,72,0	0/0:14,0:14:39.13:0,39,623	0/0:32,0:32:96.24:0,96,1457	0/0:39,0:39:99:0,117,1765	0/0:32,0:32:96.33:0,96,1534	1/1:0,21:21:60.20:838,60,0	1/1:0,16:16:45.06:585,45,0	0/0:31,0:31:93.30:0,93,1463	0/0:33,0:33:96.30:0,96,1494	0/0:35,0:35:99:0,105,1653	0/0:27,0:27:81.28:0,81,1289	0/0:26,0:26:78.25:0,78,1223	0/0:47,0:47:99:0,141,2250	0/0:29,0:29:87.28:0,87,1367	1/1:0,9:9:24.06:303,24,0	0/0:13,0:13:39.12:0,39,596	0/0:43,0:43:99:0,126,1941	0/0:17,0:17:51.13:0,51,787	0/0:23,0:23:69.24:0,69,1103	0/0:36,0:36:99:0,108,1702	0/0:14,0:14:42.14:0,42,671	0/0:21,1:22:24.26:0,24,965	0/0:23,0:23:69.18:0,69,1029	0/0:14,0:14:42.14:0,42,664
chr10	20892095	.	GC	G	960.55	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.859;DP=703;FS=2.401;HRun=4;HaplotypeScore=65.7970;InbreedingCoeff=0.9683;MQ=89.84;MQ0=0;MQRankSum=-1.690;QD=30.99;ReadPosRankSum=-3.541;VQSLOD=2.4684;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,144,2015	0/0:4,0:4:12.04:0,12,168	0/0:29,0:29:76.12:0,76,1013	0/0:24,0:24:56.88:0,57,727	0/0:16,0:16:45.15:0,45,623	0/0:20,0:20:60.19:0,60,820	0/0:25,0:25:72.22:0,72,990	1/1:1,30:31:90.25:1055,90,0	0/0:23,0:23:69.21:0,69,945	0/0:21,0:21:63.21:0,63,882	0/0:16,0:16:48.16:0,48,670	0/0:16,0:16:48.16:0,48,660	0/0:18,0:18:51.17:0,51,713	0/0:28,0:28:81.25:0,81,1100	0/0:37,0:37:99:0,108,1512	0/0:27,0:27:81.23:0,81,1084	0/0:44,0:44:99:0,129,1803	0/0:29,0:29:87.28:0,87,1198	0/0:26,0:26:75.19:0,75,981	0/0:23,0:23:66.21:0,66,906	0/0:45,0:45:99:0,129,1804	0/0:14,0:14:42.14:0,42,588	0/0:17,0:17:48.16:0,48,671	0/0:40,0:40:99:0,120,1640	0/0:16,0:16:48.16:0,48,671	0/0:24,0:24:69.22:0,69,951	0/0:33,0:33:93.29:0,93,1276	0/0:8,0:8:24.08:0,24,336
chr10	20892484	.	ACC	A	555.01	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.974;DP=375;FS=3.422;HRun=9;HaplotypeScore=54.1331;InbreedingCoeff=0.8664;MQ=92.24;MQ0=1;MQRankSum=0.617;QD=22.20;ReadPosRankSum=-3.075;VQSLOD=1.9913;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:36.12:0,36,580	0/0:4,0:4:9.02:0,9,124	0/0:30,0:29:54.96:0,55,864	0/0:20,0:19:42.38:0,42,592	0/0:10,0:10:30.10:0,30,490	0/0:8,0:8:24.07:0,24,347	0/0:17,0:18:50.66:0,51,797	1/1:6,19:25:57.14:650,57,0	0/0:9,0:9:24.08:0,24,394	0/0:9,0:10:26.58:0,27,400	0/0:6,0:6:18.05:0,18,256	0/0:12,0:13:35.60:0,36,528	0/0:5,0:5:12.04:0,12,197	0/0:13,0:13:36.11:0,36,562	0/0:12,0:12:33.11:0,33,542	0/0:9,0:9:24.08:0,24,394	0/0:25,0:25:69.22:0,69,1098	0/0:26,0:26:72.23:0,72,1150	0/0:13,0:13:27.09:0,27,411	0/0:9,0:9:24.06:0,24,349	0/0:28,0:27:63.19:0,63,997	0/0:7,0:7:18.06:0,18,295	0/0:7,0:7:18.06:0,18,295	0/0:23,0:23:63.20:0,63,1002	0/0:7,0:7:21.06:0,21,321	0/0:9,0:9:27.09:0,27,443	0/0:7,0:7:18.06:0,18,295	0/0:5,0:5:15.05:0,15,246
chr10	20892604	.	C	CTAA	1585.50	PASS	AB=1.000;AC=34;AF=0.739;AN=46;BaseQRankSum=-5.265;DP=276;FS=2.221;HRun=0;HaplotypeScore=53.5398;InbreedingCoeff=0.4925;MQ=69.49;MQ0=1;MQRankSum=1.432;QD=8.05;ReadPosRankSum=-2.103;VQSLOD=1.8705;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:9,0:9:9.01:50,0,9	0/0:6,0:6:11.90:0,12,84	./.	./.	0/0:12,0:12:8.93:0,9,63	1/1:19,0:19:25.28:267,25,0	0/1:10,0:10:12:32,0,12	1/1:30,0:30:9:99,9,0	1/1:6,0:6:5.95:42,6,0	0/0:11,0:11:5.95:0,6,42	0/0:10,0:10:5.95:0,6,42	./.	1/1:6,0:6:8.93:62,9,0	1/1:10,0:10:14.88:104,15,0	1/1:4,4:8:3.01:58,3,0	1/1:3,0:3:6.02:78,6,0	1/1:20,0:20:16.65:255,17,0	1/1:17,0:17:18.62:304,19,0	0/0:15,0:14:14.87:0,15,104	1/1:6,0:6:2.98:21,3,0	1/1:11,0:11:11.90:83,12,0	./.	./.	1/1:1,0:1:3.01:55,3,0	1/1:9,0:9:5.95:42,6,0	1/1:12,0:12:8.93:62,9,0	1/1:6,0:6:2.98:21,3,0	1/1:14,0:14:14.88:104,15,0
chr10	20892638	.	TAATA	T	3050.37	PASS	AB=1.000;AC=20;AF=0.357;AN=56;BaseQRankSum=-6.754;DP=265;FS=12.447;HRun=0;HaplotypeScore=54.8382;InbreedingCoeff=0.5735;MQ=86.36;MQ0=1;MQRankSum=4.371;QD=27.99;ReadPosRankSum=-4.096;VQSLOD=1.2884;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:8:12.01:0,12,139	1/1:0,8:8:15.01:266,15,0	0/0:9,0:9:23.69:0,24,308	0/0:10,0:8:21.05:0,21,271	1/1:0,6:6:18.06:285,18,0	0/0:16,0:16:32.65:0,33,378	0/0:7,0:7:9:0,9,101	0/1:30,0:30:99:604,0,180	0/0:7,0:7:6.02:0,6,79	1/1:0,15:15:45.14:598,45,0	1/1:1,7:8:12.04:190,12,0	1/1:4,0:4:12.04:148,12,0	0/0:6,0:6:11.63:0,12,158	0/0:6,0:6:15.04:0,15,185	0/0:8,0:8:15.05:0,15,229	0/0:4,0:4:6.02:0,6,79	0/0:19,0:19:26.57:0,27,320	0/0:19,0:19:27.09:0,27,355	1/1:2,11:12:31.34:490,31,0	0/1:6,0:6:21.28:167,0,21	0/0:10,0:10:12.04:0,12,157	1/1:4,0:4:12.04:148,12,0	1/1:4,0:4:12.04:148,12,0	0/1:3,0:3:31.15:65,0,31	0/0:5,0:5:5.60:0,6,78	0/1:8,0:8:94.09:139,0,94	0/0:10,0:10:2.98:0,3,39	0/0:12,0:12:21.04:0,21,245
chr10	20892641	.	TA	T	2960.16	PASS	AB=1.000;AC=40;AF=0.714;AN=56;BaseQRankSum=-0.497;DP=280;FS=0.947;HRun=3;HaplotypeScore=48.0568;InbreedingCoeff=0.6029;MQ=91.03;MQ0=1;MQRankSum=-5.182;QD=13.39;ReadPosRankSum=2.706;VQSLOD=2.4416;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,1:8:2.98:37,3,0	1/1:8,0:8:14.75:105,15,0	0/0:13,0:13:36.03:0,36,434	0/0:11,0:9:24.06:0,24,304	1/1:6,0:6:17.85:164,18,0	1/1:16,0:16:8.39:47,8,0	1/1:6,1:7:2.70:36,3,0	1/1:31,0:31:65.62:769,66,0	0/0:8,0:8:0:0,0,0	1/1:15,0:15:42.88:481,43,0	1/1:7,0:7:11.90:110,12,0	1/1:0,5:5:12.04:148,12,0	0/1:6,0:6:0.02:0,0,0	1/1:6,0:6:4.95:18,5,0	0/0:8,0:8:15.03:0,15,190	0/1:4,0:4:0:0,0,0	1/1:17,0:17:1.90:7,2,0	0/0:19,0:19:0:0,0,1	1/1:12,0:11:32.75:311,33,0	1/1:8,0:8:21.04:254,21,0	0/1:12,0:12:0:0,0,0	1/1:0,4:4:12.04:148,12,0	1/1:0,6:6:12.04:148,12,0	1/1:2,2:4:10.25:89,10,0	0/1:6,0:6:0.03:0,0,0	1/1:9,0:9:18.02:222,18,0	0/1:10,0:10:0.01:0,0,0	0/1:14,0:14:0.03:0,0,0
chr10	20892642	.	A	AATAAT	6191.17	PASS	AB=0.866;AC=43;AF=0.768;AN=56;BaseQRankSum=-5.033;DP=308;FS=3.537;HRun=0;HaplotypeScore=58.8030;InbreedingCoeff=0.1832;MQ=90.15;MQ0=1;MQRankSum=-3.092;QD=22.60;ReadPosRankSum=0.444;VQSLOD=4.3615;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:1,0:9:11.89:43,0,12	0/1:8,0:8:18.95:19,0,81	0/0:12,0:13:36.46:0,36,432	0/0:12,0:10:24.06:0,24,304	0/1:6,0:6:54.21:93,0,54	1/1:3,14:18:30.10:800,30,0	0/1:1,0:9:14.84:27,0,15	1/1:5,0:36:87.28:1279,87,0	1/1:0,0:8:5.86:38,6,0	0/1:15,0:15:5.96:401,0,6	0/1:7,0:7:36.10:62,0,36	1/1:5,0:5:12.04:148,12,0	1/1:1,0:6:8.83:55,9,0	1/1:0,0:6:14.78:131,15,0	0/0:9,0:9:2.47:0,2,154	1/1:1,4:6:6.02:194,6,0	1/1:2,14:21:25.90:714,26,0	1/1:1,18:25:24.08:775,24,0	0/1:13,0:12:86.33:189,0,86	1/1:0,0:9:24.01:273,24,0	1/1:1,0:13:11.77:73,12,0	1/1:4,0:4:12.04:148,12,0	1/1:6,0:6:12.04:148,12,0	1/1:3,0:4:11.71:140,12,0	1/1:0,0:6:5.75:37,6,0	1/1:1,0:10:26.88:277,27,0	1/1:0,0:10:2.94:18,3,0	1/1:0,0:14:14.78:107,15,0
chr10	20894976	.	CAA	C	21822.18	PASS	AB=0.938;AC=39;AF=0.696;AN=56;BaseQRankSum=16.619;DP=786;FS=19.169;HRun=3;HaplotypeScore=127.5206;InbreedingCoeff=0.9539;MQ=89.94;MQ0=0;MQRankSum=-6.701;QD=40.49;ReadPosRankSum=8.559;VQSLOD=3.0577;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:0,39:39:99:1608,105,0	0/1:14,1:15:0.79:1,0,766	0/0:29,0:29:87.26:0,87,1565	0/0:31,0:31:93.31:0,93,1748	0/0:18,0:18:51.17:0,51,979	1/1:0,19:19:54.18:827,54,0	1/1:0,22:22:63.21:965,63,0	0/0:37,0:37:99:0,108,2088	1/1:2,26:28:72.24:1103,72,0	0/0:42,0:42:99:0,126,2376	0/0:25,0:25:75.26:0,75,1449	1/1:1,31:32:87.30:1332,87,0	1/1:2,15:17:36.12:551,36,0	1/1:1,29:30:69.23:1056,69,0	0/0:44,0:44:99:0,132,2508	1/1:0,45:45:99:1976,129,0	1/1:0,33:33:93.32:1424,93,0	1/1:1,23:24:66.22:1011,66,0	0/0:21,0:21:60.20:0,60,1120	1/1:3,29:32:87.30:1332,87,0	1/1:0,35:35:93.32:1424,93,0	1/1:1,31:32:90.31:1378,90,0	1/1:0,21:21:63.21:964,63,0	1/1:2,34:36:93.32:1424,93,0	1/1:1,26:27:78.26:1194,78,0	1/1:1,26:27:78.26:1195,78,0	1/1:1,16:17:48.16:735,48,0	1/1:0,8:8:21.07:322,21,0
chr10	20896294	.	G	GTGAGC	2591.29	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-3.739;DP=611;FS=11.940;HRun=0;HaplotypeScore=141.2809;InbreedingCoeff=0.9915;MQ=91.85;MQ0=0;MQRankSum=-7.282;QD=80.98;ReadPosRankSum=-4.563;VQSLOD=3.9348;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,102,2217	0/0:6,0:6:18.06:0,18,395	0/0:24,0:24:49.47:0,49,1327	0/0:29,0:29:80.73:0,81,1562	0/0:22,0:22:66.23:0,66,1446	0/0:28,0:28:84.27:0,84,1783	0/0:19,0:19:57.16:0,57,1167	1/1:10,20:31:90.31:2686,90,0	0/0:19,0:19:54.18:0,54,1146	0/0:33,0:33:90.31:0,90,1991	0/0:16,0:16:48.15:0,48,1011	0/0:14,0:14:36.12:0,36,796	0/0:12,0:12:36.11:0,36,752	0/0:13,0:13:33.11:0,33,734	0/0:28,0:28:84.29:0,84,1848	0/0:21,0:21:57.20:0,57,1246	0/0:31,0:31:90.31:0,90,2007	0/0:22,0:22:66.23:0,66,1471	0/0:24,0:24:72.25:0,72,1605	0/0:26,0:26:78.25:0,78,1698	0/0:22,0:22:57.19:0,57,1271	0/0:23,0:23:66.20:0,66,1425	0/0:19,0:19:54.17:0,54,1161	0/0:15,0:15:45.15:0,45,948	0/0:21,0:21:63.19:0,63,1361	0/0:24,0:24:72.25:0,72,1592	0/0:17,0:17:48.16:0,48,1070	0/0:16,0:16:48.16:0,48,1071
chr10	20896375	.	AGTGTGT	A	2247.89	PASS	AB=0.880;AC=35;AF=0.673;AN=52;BaseQRankSum=1.268;DP=583;FS=2.703;HRun=0;HaplotypeScore=128.1541;InbreedingCoeff=-0.1899;MQ=56.62;MQ0=21;MQRankSum=-2.283;QD=4.74;ReadPosRankSum=-0.155;VQSLOD=2.5758;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:32,1:29:18.38:33,0,18	1/1:7,0:12:5.98:67,6,0	./.	./.	1/1:13,0:17:2.75:15,3,0	1/1:23,0:23:15.01:210,15,0	0/1:19,0:19:2.24:12,0,2	0/0:23,0:18:3.15:0,3,12	1/1:7,9:16:2.94:60,3,0	0/1:20,0:25:12.11:38,0,12	0/1:8,0:12:33.56:34,0,55	0/1:18,1:19:38.14:47,0,38	0/1:15,1:16:27:128,0,27	1/1:11,6:17:6.02:98,6,0	0/0:9,0:25:21.03:0,21,407	0/1:15,7:23:4.74:154,0,5	1/1:22,1:23:25.92:318,26,0	1/1:19,1:19:14.91:181,15,0	1/1:18,0:13:3.01:42,3,0	1/1:9,4:13:12.42:138,12,0	0/1:41,1:40:96.78:97,0,110	1/1:10,3:15:9.53:129,10,0	0/1:10,3:13:7.85:93,0,8	0/1:17,1:19:11.21:11,0,22	0/1:15,6:22:8.21:67,0,8	0/1:18,2:23:39.94:172,0,40	1/1:17,2:19:14.26:220,14,0	0/1:11,0:10:5.96:33,0,6
chr10	20896486	.	TGA	T	85.95	PASS	AB=0.950;AC=6;AF=0.107;AN=56;BaseQRankSum=6.840;DP=724;FS=0.000;HRun=0;HaplotypeScore=106.6164;InbreedingCoeff=0.3173;MQ=87.55;MQ0=9;MQRankSum=-0.860;QD=0.54;ReadPosRankSum=-2.933;VQSLOD=0.8567;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,4:41:20.44:0,20,1308	0/0:12,0:12:36.12:0,36,576	0/0:79,0:45:58.26:0,58,674	0/1:90,0:43:4.61:5,0,472	0/1:16,1:17:0.29:0,0,482	0/0:27,1:28:35.84:0,36,1073	0/0:28,0:28:81.28:0,81,1303	1/1:11,0:25:36.60:176,37,0	0/0:17,0:17:42.14:0,42,674	0/0:25,0:25:51.17:0,51,820	0/0:14,0:14:33.10:0,33,499	0/0:27,0:27:69.24:0,69,1110	0/0:15,1:16:11.76:0,12,685	0/0:20,0:20:42.14:0,42,674	0/0:19,0:18:42.14:0,42,674	0/0:28,1:28:44.84:0,45,1190	0/0:24,1:25:20.74:0,21,785	0/0:15,1:16:8.74:0,9,626	0/0:17,0:16:30.10:0,30,471	0/1:16,0:16:3.09:3,0,449	0/0:30,1:31:29.73:0,30,953	0/0:25,0:25:51.13:0,51,817	0/0:16,1:17:5.74:0,6,586	0/0:29,1:30:35.83:0,36,1063	0/1:10,2:12:9.32:9,0,357	0/0:20,0:20:42.10:0,42,628	0/0:20,0:20:54.18:0,54,871	0/0:8,0:8:21.07:0,21,331
chr10	20896891	.	C	CT	2434.28	PASS	AB=0.771;AC=12;AF=0.214;AN=56;BaseQRankSum=-4.044;DP=619;FS=3.592;HRun=10;HaplotypeScore=67.9064;InbreedingCoeff=0.8274;MQ=73.82;MQ0=0;MQRankSum=0.445;QD=16.45;ReadPosRankSum=-1.926;VQSLOD=3.6079;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:95.78:0,96,773	1/1:2,7:9:5.54:176,6,0	0/1:15,1:18:3.98:4,0,153	0/0:14,0:13:15.77:0,16,145	1/1:3,26:29:48.62:684,49,0	0/0:28,0:29:76.91:0,77,618	0/0:26,0:26:62.86:0,63,511	1/1:10,0:29:57.21:304,57,0	0/0:15,0:15:41.95:0,42,345	1/1:4,17:21:48.08:489,48,0	1/1:3,20:23:57.06:592,57,0	0/0:24,0:25:58.96:0,59,474	0/0:24,0:24:53.86:0,54,434	0/0:15,0:15:32.94:0,33,271	0/0:27,0:27:53.85:0,54,439	0/0:19,0:19:38.90:0,39,320	0/0:32,0:32:92.83:0,93,755	0/0:18,0:18:38.79:0,39,301	0/1:6,13:19:2.45:359,0,2	0/0:20,0:20:50.86:0,51,407	0/0:24,0:24:71.82:0,72,575	0/0:27,0:27:62.84:0,63,504	0/0:19,1:21:37.18:0,37,406	0/0:15,0:15:35.93:0,36,292	0/0:24,0:26:60.95:0,61,474	0/0:27,2:29:22.43:0,22,520	0/0:20,0:20:38.93:0,39,320	0/0:10,0:10:17.97:0,18,148
chr10	20897289	.	T	TG	972.48	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.337;DP=702;FS=2.609;HRun=4;HaplotypeScore=66.9937;InbreedingCoeff=0.9832;MQ=90.40;MQ0=0;MQRankSum=-2.573;QD=36.02;ReadPosRankSum=-3.868;VQSLOD=2.3875;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,132,1485	0/0:8,0:8:21.06:0,21,238	0/0:30,0:30:69.01:0,69,740	0/0:24,0:24:63.10:0,63,679	0/0:26,0:26:78.22:0,78,883	0/0:23,0:23:69.20:0,69,783	0/0:29,0:29:84.22:0,84,943	1/1:1,26:27:78.26:1067,78,0	0/0:26,0:26:69.17:0,69,769	0/0:26,0:26:78.22:0,78,884	0/0:13,0:13:27.07:0,27,306	0/0:29,0:29:81.21:0,81,909	0/0:22,0:22:66.16:0,66,727	0/0:25,0:25:72.20:0,72,811	0/0:33,0:33:96.26:0,96,1079	0/0:33,0:33:93.26:0,93,1055	0/0:35,0:35:99:0,102,1147	0/0:21,0:21:57.12:0,57,632	0/0:8,0:8:21.06:0,21,238	0/0:20,0:20:51.14:0,51,578	0/0:33,0:33:93.22:0,93,1026	0/0:19,0:19:45.10:0,45,492	0/0:28,0:28:75.21:0,75,843	0/0:26,0:26:75.21:0,75,850	0/0:26,0:26:69.20:0,69,783	0/0:31,0:31:93.27:0,93,1055	0/0:27,0:27:78.22:0,78,884	0/0:7,0:7:18.05:0,18,204
chr10	20900322	.	C	CG	2579.58	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-12.333;DP=606;FS=0.960;HRun=7;HaplotypeScore=61.0059;InbreedingCoeff=0.9966;MQ=79.62;MQ0=0;MQRankSum=0.362;QD=28.66;ReadPosRankSum=0.592;VQSLOD=4.2444;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,126,1216	0/0:7,0:7:21.03:0,21,202	0/0:17,0:16:38.40:0,38,345	0/0:22,0:22:30.98:0,31,318	0/0:17,0:17:48.08:0,48,463	0/0:12,0:12:30.03:0,30,284	0/0:29,0:29:75.10:0,75,719	0/0:28,0:28:57.06:0,57,546	0/0:19,0:19:48.08:0,48,463	0/0:22,0:22:53.85:0,54,521	0/0:15,0:15:42.07:0,42,405	0/0:17,0:17:45.07:0,45,434	0/0:17,0:17:42.06:0,42,405	0/0:28,0:28:72.11:0,72,695	0/0:22,0:22:60.09:0,60,579	1/1:2,19:21:28.20:623,28,0	1/1:4,28:32:78.24:942,78,0	1/1:2,35:37:96.29:1157,96,0	0/0:27,0:27:69.08:0,69,657	0/0:18,0:18:54.01:0,54,501	0/0:12,0:12:30.04:0,30,290	0/0:18,0:18:54.07:0,54,514	0/0:20,0:20:51.08:0,51,492	0/0:24,0:24:60.04:0,60,570	0/0:12,0:12:27.04:0,27,261	0/0:24,0:24:57.08:0,57,546	0/0:30,0:29:90.15:0,90,869	0/0:12,0:12:24.02:0,24,232
chr10	20900433	.	GTGGTTCA	G	1552.33	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=-4.421;DP=666;FS=4.392;HRun=0;HaplotypeScore=213.7262;InbreedingCoeff=0.1649;MQ=86.29;MQ0=0;MQRankSum=-3.097;QD=9.03;ReadPosRankSum=-8.770;VQSLOD=-0.7176;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:55,0:55:9.20:9,0,4058	0/0:12,0:12:36.12:0,36,1505	0/0:20,0:20:50.31:0,50,1856	0/0:32,0:31:74.04:0,74,2536	0/0:20,0:20:60.11:0,60,2092	0/0:18,0:18:34.19:0,34,1457	0/1:28,0:28:38.71:39,0,2059	1/1:0,25:25:74.87:1572,75,0	0/1:21,0:21:10.78:11,0,1635	0/0:18,0:18:54.18:0,54,2153	0/0:20,0:20:60.13:0,60,2129	0/0:34,0:34:76.84:0,77,2942	0/0:24,0:24:56.25:0,56,2076	0/0:21,0:21:61.76:0,62,1819	0/0:26,0:26:78.24:0,78,2987	0/0:26,0:26:78.27:0,78,2407	0/0:39,0:39:8.95:0,9,2890	0/0:22,0:22:21.22:0,21,1714	0/0:25,0:25:75.24:0,75,2662	0/0:14,0:14:42.14:0,42,1290	0/1:36,0:36:34.63:35,0,2662	0/0:14,0:14:42.06:0,42,1232	0/0:20,0:20:35.21:0,35,1639	0/0:23,0:23:45.24:0,45,2002	0/0:16,0:16:2.16:0,2,1207	0/0:27,0:27:61.26:0,61,2416	0/0:22,0:22:66.23:0,66,2070	0/1:7,0:7:19.93:20,0,466
chr10	20901433	.	A	AAG	15269.16	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-11.881;DP=440;FS=0.000;HRun=0;HaplotypeScore=44.4435;InbreedingCoeff=0.9642;MQ=87.62;MQ0=2;MQRankSum=-4.674;QD=45.04;ReadPosRankSum=4.025;VQSLOD=6.3169;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,29:28:69.24:1241,69,0	0/0:8,0:8:24.06:0,24,305	0/0:14,0:14:39.13:0,39,527	0/0:21,0:20:39.12:0,39,517	0/0:14,0:14:42.10:0,42,566	1/1:0,14:13:36.12:647,36,0	1/1:2,24:26:66.22:1156,66,0	1/1:3,20:22:51.12:828,51,0	1/1:0,16:18:48.16:863,48,0	0/0:14,0:14:42.13:0,42,560	0/0:8,0:8:24.08:0,24,336	1/1:1,12:13:36.12:648,36,0	1/1:4,13:17:39.13:686,39,0	1/1:1,23:24:63.22:1133,63,0	0/0:9,0:9:27.09:0,27,378	1/1:0,9:10:20.91:378,21,0	1/1:0,20:20:51.17:918,51,0	1/1:0,19:19:57.20:1026,57,0	0/0:13,0:13:33.03:0,33,406	1/1:1,5:6:15.05:270,15,0	1/1:0,32:32:72.25:1296,72,0	1/1:1,10:11:27.09:486,27,0	1/1:0,6:6:15.05:270,15,0	1/1:1,18:19:48.16:864,48,0	1/1:2,14:16:42.14:753,42,0	1/1:0,19:19:54.19:972,54,0	1/1:0,16:16:45.15:810,45,0	1/1:1,0:1:2.98:22,3,0
chr10	20902521	.	TC	T	560.79	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.320;DP=403;FS=30.220;HRun=7;HaplotypeScore=43.5601;InbreedingCoeff=0.8633;MQ=93.21;MQ0=0;MQRankSum=-3.961;QD=18.69;ReadPosRankSum=-3.192;VQSLOD=1.1369;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:63.20:0,63,783	0/0:2,0:2:6.02:0,6,75	0/0:20,0:20:48.14:0,48,585	0/0:17,0:17:36.88:0,37,441	0/0:12,0:12:33.11:0,33,414	0/0:17,0:17:51.12:0,51,623	0/0:22,0:22:57.18:0,57,717	1/1:13,17:30:68.61:656,69,0	0/0:10,0:10:27.09:0,27,339	0/0:16,0:15:45.12:0,45,540	0/0:6,0:6:18.04:0,18,211	0/0:13,0:13:36.06:0,36,419	0/0:8,0:8:24.08:0,24,302	0/0:10,0:10:21.07:0,21,264	0/0:16,0:16:48.13:0,48,579	0/0:17,0:17:48.15:0,48,604	0/0:13,0:13:39.12:0,39,490	0/0:23,0:23:63.19:0,63,778	0/0:18,0:17:45.13:0,45,542	0/0:6,0:6:15.05:0,15,189	0/0:19,0:19:54.15:0,54,652	0/0:9,0:9:27.07:0,27,327	0/0:9,0:9:24.06:0,24,284	0/0:29,0:29:84.27:0,84,1056	0/0:10,0:10:24.08:0,24,302	0/0:13,0:13:39.06:0,39,460	0/0:10,0:10:30.10:0,30,377	0/0:5,0:5:15.05:0,15,189
chr10	20902563	.	C	CG	897.23	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-5.170;DP=443;FS=38.911;HRun=1;HaplotypeScore=45.0249;InbreedingCoeff=0.9298;MQ=90.64;MQ0=0;MQRankSum=0.087;QD=34.51;ReadPosRankSum=-4.181;VQSLOD=0.2542;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:81.26:0,81,1044	0/0:5,0:5:15.04:0,15,181	0/0:24,0:24:50.39:0,50,556	0/0:13,0:13:27.03:0,27,319	0/0:9,0:9:24.07:0,24,297	0/0:18,0:18:51.12:0,51,641	0/0:22,0:22:66.15:0,66,798	1/1:1,25:26:74.79:992,75,0	0/0:8,0:8:24.08:0,24,311	0/0:12,0:12:36.12:0,36,467	0/0:7,0:7:21.05:0,21,257	0/0:20,0:20:60.10:0,60,729	0/0:14,0:14:39.04:0,39,457	0/0:9,0:9:27.03:0,27,330	0/0:16,0:16:48.16:0,48,622	0/0:16,0:16:48.15:0,48,609	0/0:23,0:23:66.12:0,66,791	0/0:24,0:24:69.18:0,69,873	0/0:14,0:14:39.13:0,39,504	0/0:5,0:5:15.05:0,15,195	0/0:24,0:24:72.16:0,72,898	0/0:8,0:8:24.08:0,24,311	0/0:10,0:10:30.10:0,30,386	0/0:35,0:35:99:0,99,1280	0/0:12,0:12:36.08:0,36,427	0/0:22,0:22:63.19:0,63,803	0/0:14,0:14:42.12:0,42,517	0/0:4,0:4:12.04:0,12,156
chr10	20902660	.	TG	T	6841.12	PASS	AB=0.929;AC=40;AF=0.714;AN=56;BaseQRankSum=2.461;DP=436;FS=13.996;HRun=9;HaplotypeScore=49.6476;InbreedingCoeff=0.7496;MQ=83.59;MQ0=0;MQRankSum=-3.447;QD=18.95;ReadPosRankSum=5.257;VQSLOD=3.7222;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,15:22:39.01:355,39,0	0/0:2,0:2:6.02:0,6,68	0/0:20,1:20:10.44:0,10,277	0/1:16,0:16:8.27:8,0,137	0/0:10,0:10:15.04:0,15,172	1/1:2,24:26:57.03:522,57,0	1/1:3,24:27:60.03:549,60,0	0/0:9,0:9:17.07:0,17,169	1/1:2,14:16:36.01:329,36,0	0/1:5,1:6:18.40:18,0,60	0/0:1,0:1:3.01:0,3,34	1/1:2,22:24:60.03:548,60,0	1/1:5,17:22:36:329,36,0	1/1:3,12:16:31.84:281,32,0	0/0:16,1:17:20.67:0,21,482	1/1:1,19:20:54.03:494,54,0	1/1:3,16:19:41.85:384,42,0	1/1:4,26:30:62.91:576,63,0	0/0:15,0:15:33.08:0,33,369	1/1:2,0:2:6:54,6,0	1/1:2,34:36:71.99:659,72,0	1/1:3,3:6:17.48:140,17,0	1/1:4,1:5:11.27:86,11,0	1/1:4,17:21:42.02:384,42,0	1/1:2,7:9:21.01:192,21,0	1/1:1,9:10:27.01:246,27,0	1/1:1,20:21:54.02:494,54,0	1/1:0,7:7:21.01:192,21,0
chr10	20904574	.	CAAA	C	4862.50	PASS	AB=0.633;AC=38;AF=0.679;AN=56;BaseQRankSum=0.792;DP=533;FS=5.853;HRun=17;HaplotypeScore=92.8806;InbreedingCoeff=0.7468;MQ=45.37;MQ0=9;MQRankSum=-2.630;QD=11.77;ReadPosRankSum=4.291;VQSLOD=2.0285;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,19:31:38.55:400,39,0	0/0:11,0:14:14.93:0,15,124	0/0:5,0:3:6.02:0,6,88	0/0:5,0:4:7.27:0,7,85	0/0:13,0:21:29.33:0,29,255	1/1:4,10:18:28.26:265,28,0	1/1:6,11:24:41.80:383,42,0	1/1:7,0:24:49.46:296,49,0	1/1:10,15:24:32.30:312,32,0	0/0:11,0:19:41.92:0,42,443	0/0:7,0:15:9.35:0,9,186	1/1:12,6:20:5.52:140,6,0	0/1:6,8:15:0.59:150,0,1	1/1:9,6:15:2.64:31,3,0	0/0:15,0:15:33.09:0,33,494	1/1:9,6:15:18.43:198,18,0	1/1:11,21:34:44.39:408,44,0	0/1:7,8:16:21.65:218,0,22	0/0:14,0:25:45.67:0,46,343	1/1:5,10:16:16.15:182,16,0	1/1:6,2:10:4.62:46,5,0	1/1:6,16:23:34.84:368,35,0	1/1:12,13:27:38.40:386,38,0	1/1:6,11:19:15.97:168,16,0	1/1:5,10:21:16.10:307,16,0	1/1:6,10:17:28.35:292,28,0	1/1:11,7:17:23.50:239,24,0	1/1:10,3:14:7.26:75,7,0
chr10	20905392	.	A	ACACCCCAC	15657.44	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-9.960;DP=436;FS=75.314;HRun=0;HaplotypeScore=98.8111;InbreedingCoeff=0.8913;MQ=85.94;MQ0=0;MQRankSum=-10.337;QD=58.64;ReadPosRankSum=1.223;VQSLOD=1.9226;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:16,3:22:23.91:614,24,0	0/0:12,0:12:24.08:0,24,647	0/0:23,0:22:38.90:0,39,773	0/0:21,0:21:41.50:0,42,909	0/0:20,0:20:54.10:0,54,1209	1/1:2,6:9:12.04:513,12,0	1/1:5,15:20:36.12:1457,36,0	1/1:10,10:23:51.10:1573,51,0	1/1:2,4:9:15.05:639,15,0	0/0:26,0:25:60.18:0,60,1560	0/0:23,0:23:57.20:0,57,1496	1/1:2,8:12:21.07:873,21,0	1/1:1,7:10:21.07:897,21,0	1/1:4,5:12:12.04:501,12,0	0/0:26,0:26:63.18:0,63,1600	1/1:4,10:16:24.08:1026,24,0	1/1:6,14:20:33.11:1369,33,0	1/1:8,7:16:18.06:771,18,0	0/0:13,0:13:30.07:0,30,675	1/1:5,12:19:30.10:1206,30,0	1/1:5,8:16:17.45:764,17,0	1/1:1,1:3:3.01:128,3,0	1/1:5,8:14:9.03:381,9,0	0/0:3,2:5:1.25:0,1,3	1/1:7,15:22:30.10:1277,30,0	1/1:5,2:9:21:759,21,0	1/1:3,5:9:21.07:888,21,0	1/1:6,0:6:2.98:21,3,0
chr10	20905806	.	GTAGA	G	10231.85	PASS	AB=0.955;AC=45;AF=0.865;AN=52;BaseQRankSum=9.114;DP=667;FS=1.248;HRun=0;HaplotypeScore=147.1738;InbreedingCoeff=0.7029;MQ=49.88;MQ0=12;MQRankSum=0.765;QD=18.17;ReadPosRankSum=-0.038;VQSLOD=4.7747;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:18,18:35:3.45:484,3,0	1/1:3,7:9:12.04:186,12,0	./.	./.	1/1:17,25:42:48.14:714,48,0	0/0:22,0:22:30.06:0,30,576	1/1:13,11:24:15.05:233,15,0	0/0:31,0:27:6.02:0,6,88	1/1:9,16:24:36.12:559,36,0	0/0:37,1:38:31.62:0,32,1582	0/1:20,1:21:10.50:11,0,675	1/1:10,13:23:33.11:513,33,0	1/1:8,12:19:27.09:419,27,0	1/1:14,13:27:39.13:606,39,0	1/1:12,8:20:21.07:319,21,0	1/1:6,16:22:36.12:559,36,0	1/1:13,18:31:42.14:652,42,0	1/1:13,16:27:22.27:456,22,0	1/1:10,1:11:6.01:75,6,0	1/1:12,16:28:45.07:646,45,0	1/1:5,14:19:30.10:458,30,0	1/1:3,11:14:27.09:419,27,0	1/1:12,20:31:47.18:745,47,0	1/1:9,5:14:5.85:93,6,0	1/1:20,23:39:36.12:559,36,0	1/1:11,14:25:42.14:643,42,0	1/1:9,18:26:33.11:512,33,0	1/1:10,9:19:24.08:373,24,0
chr10	20906371	.	TC	T	709.49	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.561;DP=554;FS=8.471;HRun=8;HaplotypeScore=60.3729;InbreedingCoeff=0.9655;MQ=80.33;MQ0=0;MQRankSum=-0.132;QD=19.18;ReadPosRankSum=-3.417;VQSLOD=2.1212;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:75.19:0,75,861	0/0:8,0:8:24.06:0,24,279	0/0:34,0:28:57.53:0,58,580	0/0:15,0:12:15.75:0,16,129	0/0:22,0:22:63.09:0,63,686	0/0:15,0:15:39.10:0,39,443	0/0:21,0:21:48.11:0,48,554	1/1:7,30:37:87.04:804,87,0	0/0:24,0:24:69.17:0,69,796	0/0:8,0:8:21.06:0,21,245	0/0:16,0:16:45.11:0,45,511	0/0:14,0:14:36.10:0,36,423	0/0:22,0:22:54.17:0,54,652	0/0:23,0:23:69.19:0,69,812	0/0:28,0:28:78.15:0,78,857	0/0:18,0:18:51.15:0,51,605	0/0:22,0:22:60.15:0,60,699	0/0:13,0:13:36.10:0,36,422	0/0:20,0:20:43.13:0,43,559	0/0:16,0:16:45.09:0,45,499	0/0:21,0:21:51.16:0,51,616	0/0:16,0:16:42.02:0,42,466	0/0:16,0:16:45.08:0,45,503	0/0:22,0:22:57.09:0,57,669	0/0:23,0:23:60.14:0,60,681	0/0:27,0:27:75.18:0,75,851	0/0:19,0:18:57.12:0,57,656	0/0:5,0:5:15.05:0,15,181
chr10	20907150	.	GT	G	10892.98	PASS	AB=0.571;AC=49;AF=0.875;AN=56;BaseQRankSum=-0.902;DP=608;FS=3.882;HRun=10;HaplotypeScore=67.5895;InbreedingCoeff=0.8270;MQ=73.69;MQ0=3;MQRankSum=-5.632;QD=19.56;ReadPosRankSum=4.120;VQSLOD=5.8619;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,31:31:74.99:651,75,0	1/1:0,10:10:24:208,24,0	0/0:13,0:13:16.50:0,16,178	0/0:16,0:16:30.04:0,30,306	1/1:6,15:21:41.97:365,42,0	1/1:3,25:29:77.02:657,77,0	1/1:1,23:24:59.99:520,60,0	1/1:5,0:27:11.72:53,12,0	1/1:6,13:19:38.97:339,39,0	1/1:2,22:24:62.99:547,63,0	1/1:4,8:12:17.98:156,18,0	1/1:4,15:19:32.97:287,33,0	1/1:3,18:20:53.99:469,54,0	1/1:2,28:30:83.98:729,84,0	0/0:19,3:22:5.14:0,5,505	1/1:5,39:43:85.28:865,85,0	1/1:4,22:26:62.98:547,63,0	1/1:2,13:15:32.95:279,33,0	1/1:4,25:28:65.64:569,66,0	1/1:3,23:26:65.96:573,66,0	1/1:3,12:15:38.99:338,39,0	1/1:5,12:17:38.99:338,39,0	0/1:3,9:11:2.65:204,0,3	1/1:3,21:24:50.99:443,51,0	1/1:3,21:23:62.86:535,63,0	1/1:4,23:26:62.96:544,63,0	1/1:1,17:18:47.98:417,48,0	1/1:1,12:11:29.99:260,30,0
chr10	20908028	.	TG	T	6094.40	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=9.361;DP=505;FS=11.591;HRun=3;HaplotypeScore=90.2916;InbreedingCoeff=0.9440;MQ=62.73;MQ0=1;MQRankSum=-2.915;QD=18.14;ReadPosRankSum=4.693;VQSLOD=3.6136;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:20,8:28:68.54:590,69,0	0/0:6,0:6:6.79:0,7,69	0/0:20,0:12:29.12:0,29,315	0/0:14,0:8:17.83:0,18,146	0/0:17,0:17:42.45:0,42,427	1/1:3,15:18:22.29:231,22,0	1/1:18,7:25:63.12:530,63,0	0/0:32,0:31:77.87:0,78,727	1/1:2,10:12:9:85,9,0	0/0:19,0:19:42.53:0,43,445	0/0:18,0:18:41.97:0,42,413	1/1:16,4:20:44.33:396,44,0	1/1:18,4:22:44.80:411,45,0	1/1:14,4:18:49.89:413,50,0	0/0:26,0:26:34.77:0,35,341	1/1:14,5:19:49.29:471,49,0	1/1:2,14:16:14.96:154,15,0	1/1:13,4:17:45.89:420,46,0	0/0:17,0:17:47.96:0,48,493	1/1:14,7:21:47.29:412,47,0	1/1:8,0:8:14.98:124,15,0	1/1:2,14:16:24.53:229,25,0	1/1:3,7:10:4.09:20,4,0	1/1:13,2:15:39.77:326,40,0	1/1:3,13:16:23.99:248,24,0	1/1:24,5:29:22.21:554,22,0	1/1:15,4:19:37.67:311,38,0	1/1:3,4:7:15.50:169,15,0
chr10	20908030	.	GGT	G	2608.22	PASS	AB=0.957;AC=21;AF=0.375;AN=56;BaseQRankSum=12.375;DP=543;FS=9.945;HRun=0;HaplotypeScore=108.0357;InbreedingCoeff=-0.1782;MQ=61.45;MQ0=1;MQRankSum=-1.501;QD=7.29;ReadPosRankSum=7.502;VQSLOD=1.9662;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:29:20.63:263,0,21	0/0:6,0:6:11.51:0,12,125	0/0:20,0:12:34.35:0,34,383	0/0:14,0:8:15.58:0,16,154	0/0:19,0:19:50.30:0,50,655	0/1:19,2:21:51.58:67,0,52	0/1:26,0:26:21.80:221,0,22	0/0:32,0:31:83.96:0,84,997	0/1:14,1:15:0.35:0,0,49	0/0:17,0:17:46.79:0,47,599	0/0:21,0:21:57.99:0,58,669	0/1:19,1:20:53.26:177,0,53	0/1:20,2:22:64.31:198,0,64	0/1:20,0:20:29.03:115,0,29	0/0:29,0:29:34.33:0,34,548	0/1:23,3:26:57.18:308,0,57	1/1:15,1:16:0.11:80,0,0	0/1:18,0:19:31.81:187,0,32	0/0:17,0:17:48:0,48,652	0/1:19,3:22:12.01:220,0,12	0/1:7,0:8:24.79:62,0,25	0/1:17,0:17:20.61:40,0,21	0/0:10,0:10:4.04:0,4,14	1/1:15,0:15:17.48:172,17,0	1/1:14,2:17:22.16:186,22,0	0/1:29,2:32:99:366,0,130	0/1:24,0:24:89.57:90,0,109	0/1:9,0:9:22.57:23,0,55
chr10	20908256	.	C	CCG	2687.47	PASS	AB=0.888;AC=46;AF=0.821;AN=56;BaseQRankSum=0.464;DP=529;FS=44.558;HRun=0;HaplotypeScore=99.3560;InbreedingCoeff=0.0886;MQ=70.02;MQ0=3;MQRankSum=0.569;QD=5.30;ReadPosRankSum=-4.257;VQSLOD=-0.6589;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,19:23:6:72,6,0	0/1:9,0:9:11.93:78,0,12	0/1:23,0:15:11.78:12,0,148	0/1:17,0:12:13.15:20,0,13	1/1:18,0:18:7.76:206,8,0	1/1:3,16:19:0.47:1,0,0	1/1:5,19:26:2.99:13,3,0	0/1:11,0:10:8.44:9,0,8	1/1:13,0:13:14.89:111,15,0	1/1:19,0:19:19.45:335,19,0	0/1:16,0:17:32.18:39,0,32	1/1:9,0:9:6.45:49,6,0	1/1:19,0:19:42.66:334,43,0	1/1:17,0:17:16.86:157,17,0	0/0:9,0:22:23.48:0,23,202	1/1:2,12:15:5.91:38,6,0	1/1:28,2:30:20.94:188,21,0	1/1:31,0:31:12.66:177,13,0	0/1:21,0:21:13.14:229,0,13	1/1:4,7:14:11.86:79,12,0	0/1:5,11:17:0.63:105,0,1	0/1:5,9:16:0:0,0,0	1/1:4,8:14:1.78:7,2,0	1/1:4,14:23:6.01:85,6,0	1/1:5,13:20:6.45:74,6,0	1/1:8,16:28:23.27:327,23,0	1/1:20,0:21:8.46:35,8,0	1/1:13,0:13:5.94:44,6,0
chr10	20908266	.	G	GGGA	233.05	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=1.477;DP=440;FS=7.035;HRun=0;HaplotypeScore=78.2725;InbreedingCoeff=0.4134;MQ=80.22;MQ0=3;MQRankSum=1.543;QD=9.32;ReadPosRankSum=-3.520;VQSLOD=1.3457;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:13.15:0,13,150	0/0:8,0:8:14.99:0,15,167	0/0:29,0:21:19.38:0,19,323	0/0:19,0:15:10.38:0,10,172	0/0:12,0:12:24.05:0,24,284	0/0:14,0:14:23.92:0,24,195	0/0:21,0:21:9.29:0,9,87	1/1:6,11:18:35.85:326,36,0	0/0:13,0:13:23.29:0,23,156	0/0:13,0:13:35.90:0,36,337	0/0:16,0:16:29.95:0,30,304	0/0:7,0:7:10.80:0,11,82	0/0:13,0:13:18.70:0,19,116	0/0:15,0:15:38.92:0,39,341	0/0:20,0:20:20.93:0,21,182	0/0:9,0:9:5.95:0,6,45	0/0:20,0:20:30.71:0,31,215	0/0:22,0:22:33.88:0,34,336	0/0:15,0:15:39.04:0,39,407	0/0:15,0:15:28.90:0,29,204	0/0:14,0:13:13.72:0,14,124	0/0:9,0:9:8.86:0,9,70	0/0:12,0:12:11.74:0,12,103	0/0:19,0:19:7.71:0,8,144	0/0:18,0:18:8.10:0,8,161	0/0:23,0:23:58.14:0,58,532	0/0:15,0:15:0.44:0,0,96	0/1:6,0:6:5.72:6,0,42
chr10	20908743	.	A	AAC	12410.68	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=7.938;DP=612;FS=2.836;HRun=0;HaplotypeScore=105.3111;InbreedingCoeff=0.9468;MQ=72.96;MQ0=1;MQRankSum=-0.310;QD=31.18;ReadPosRankSum=4.391;VQSLOD=6.8633;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,22:31:66.13:1001,66,0	0/0:10,0:10:21.04:0,21,232	0/0:34,1:30:21.38:0,21,402	0/0:30,0:26:6.81:0,7,309	0/0:21,0:21:42.04:0,42,476	1/1:5,14:19:18.30:509,18,0	1/1:4,18:22:40.30:846,40,0	0/0:27,0:27:14.38:0,14,99	1/1:9,10:20:12.28:414,12,0	0/0:17,0:17:39.11:0,39,455	0/0:22,0:23:59.98:0,60,666	1/1:5,17:22:36.36:797,36,0	1/1:5,12:19:39.13:612,39,0	1/1:7,7:14:2.88:250,3,0	0/0:27,0:27:72.20:0,72,850	1/1:4,13:17:42.14:671,42,0	1/1:6,20:25:48.16:767,48,0	1/1:1,10:11:27.09:424,27,0	0/0:24,0:24:48.13:0,48,562	1/1:7,13:20:20.39:557,20,0	1/1:9,27:36:57.19:912,57,0	1/1:5,13:18:33.11:528,33,0	1/1:5,15:20:42.14:671,42,0	1/1:4,18:22:51.17:797,51,0	1/1:3,14:17:36.12:566,36,0	1/1:9,22:31:38.74:1003,39,0	1/1:4,19:23:32.43:748,32,0	1/1:2,8:10:21.07:336,21,0
chr10	20908757	.	CACAG	C	766.33	PASS	AB=0.981;AC=6;AF=0.107;AN=56;BaseQRankSum=-3.508;DP=590;FS=0.572;HRun=0;HaplotypeScore=167.8373;InbreedingCoeff=0.3122;MQ=71.36;MQ0=2;MQRankSum=0.608;QD=7.51;ReadPosRankSum=-7.999;VQSLOD=0.0481;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:28.19:0,28,634	0/0:8,0:8:21.07:0,21,533	0/0:44,0:38:71.61:0,72,1461	0/0:27,0:22:34.32:0,34,1043	0/0:22,0:22:57.13:0,57,1314	0/0:18,0:18:17.61:0,18,349	0/0:23,0:23:14.22:0,14,517	1/1:4,20:24:35.21:832,35,0	0/0:17,0:17:11.12:0,11,306	0/0:16,0:16:45.14:0,45,1051	0/0:25,0:25:75.12:0,75,1640	0/0:21,0:21:32.63:0,33,490	0/0:18,0:18:18.13:0,18,366	0/1:11,0:11:0.42:0,0,208	0/0:27,0:27:81.26:0,81,2153	0/0:15,0:15:39.05:0,39,370	0/0:23,0:22:26.62:0,27,434	0/0:10,0:10:27.04:0,27,263	0/0:21,0:21:63.13:0,63,1402	0/0:17,0:17:48.06:0,48,486	0/1:35,0:35:4.68:5,0,519	0/0:15,0:15:33.04:0,33,310	0/1:20,0:20:5.76:6,0,354	0/0:22,0:22:47.66:0,48,453	0/0:18,0:18:18.23:0,18,296	0/0:28,0:28:38.20:0,38,777	0/0:24,0:24:11.24:0,11,518	0/1:11,1:12:36.82:37,0,177
chr10	20908759	.	CAG	C	678.81	PASS	AB=0.981;AC=18;AF=0.321;AN=56;BaseQRankSum=-2.053;DP=581;FS=1.130;HRun=0;HaplotypeScore=146.8561;InbreedingCoeff=-0.1523;MQ=70.74;MQ0=2;MQRankSum=0.365;QD=2.02;ReadPosRankSum=-8.908;VQSLOD=0.2332;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:28,1:29:22.72:23,0,53	0/0:8,0:8:24.05:0,24,368	0/0:42,0:36:40.23:0,40,866	0/0:26,0:22:49:0,49,686	0/0:21,0:21:57.13:0,57,904	0/1:17,0:17:16.03:16,0,31	0/1:22,1:23:26.74:27,0,40	1/1:22,0:22:50.70:355,51,0	0/1:16,0:16:12.62:13,0,29	0/0:17,0:17:28.76:0,29,664	0/0:25,0:25:53.96:0,54,1001	0/1:22,0:22:32.87:36,0,33	0/1:19,0:19:12.72:32,0,13	0/1:12,0:12:20.68:34,0,21	0/0:28,0:28:84.24:0,84,1423	0/0:15,0:15:8.15:0,8,26	0/1:23,0:22:16.74:29,0,17	0/0:10,0:10:8.99:0,9,24	0/0:22,0:22:54.15:0,54,865	0/0:16,0:16:10.64:0,11,46	0/1:30,0:30:18.81:54,0,19	0/0:15,0:15:6.43:0,6,19	0/1:19,1:20:12.58:35,0,13	0/1:22,0:22:16.73:18,0,17	1/1:18,0:18:0.25:48,0,0	0/1:28,0:28:33.04:33,0,100	0/1:23,0:23:18.05:18,0,62	0/1:10,2:12:1.34:71,0,1
chr10	20908816	.	G	GT	4494.76	PASS	AB=0.827;AC=48;AF=0.857;AN=56;BaseQRankSum=-0.140;DP=465;FS=0.615;HRun=13;HaplotypeScore=114.1848;InbreedingCoeff=0.3587;MQ=77.94;MQ0=4;MQRankSum=-1.286;QD=10.91;ReadPosRankSum=1.444;VQSLOD=4.1925;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:17,8:24:31.73:165,0,32	1/1:5,3:10:20.65:160,21,0	0/0:34,0:19:14.62:0,15,106	0/1:37,0:20:21.62:22,0,36	1/1:5,18:24:47.56:391,48,0	1/1:10,8:19:12.25:237,12,0	1/1:3,6:10:20.86:182,21,0	0/1:24,2:28:32.09:32,0,219	1/1:3,3:7:14.81:117,15,0	1/1:7,9:17:23.83:200,24,0	0/1:8,4:13:34.95:116,0,35	1/1:8,1:9:8.99:75,9,0	1/1:8,8:16:18.28:291,18,0	1/1:8,4:12:20.36:167,20,0	0/0:19,0:19:32.67:0,33,226	1/1:6,6:12:23.35:195,23,0	1/1:9,6:16:26.86:234,27,0	1/1:6,1:9:11.48:77,11,0	1/1:7,3:10:15.01:135,15,0	1/1:8,2:10:11.95:98,12,0	1/1:7,2:9:8.96:75,9,0	1/1:4,3:8:11.85:98,12,0	1/1:11,9:20:21.28:314,21,0	1/1:9,5:16:20.68:163,21,0	1/1:11,4:17:30.44:223,30,0	1/1:15,4:22:29.43:215,29,0	1/1:8,7:15:12.43:244,12,0	1/1:10,7:18:34.75:268,35,0
chr10	20911360	.	G	GGAAA	13328.71	PASS	AB=1.000;AC=40;AF=0.714;AN=56;BaseQRankSum=-1.324;DP=702;FS=9.120;HRun=0;HaplotypeScore=118.4289;InbreedingCoeff=0.7426;MQ=68.79;MQ0=2;MQRankSum=-3.025;QD=25.73;ReadPosRankSum=-0.913;VQSLOD=4.1616;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,1:23:1.29:106,1,0	0/0:16,0:16:45.15:0,45,749	0/1:31,0:24:13.66:14,0,200	0/1:21,0:13:25.40:63,0,25	0/0:39,0:39:99:0,111,1667	1/1:2,11:14:24.08:592,24,0	1/1:7,10:17:5.05:80,5,0	0/0:22,0:22:39.57:0,40,568	1/1:4,0:16:21.07:368,21,0	0/0:29,0:29:72.23:0,72,1150	0/0:24,0:24:60.17:0,60,919	1/1:3,1:21:33.11:598,33,0	1/1:6,16:22:36.12:884,36,0	1/1:2,0:15:18.06:315,18,0	0/0:34,0:34:78.20:0,78,1167	1/1:2,16:21:39.13:962,39,0	1/1:12,35:46:74.32:1722,74,0	1/1:10,20:32:39.60:940,40,0	0/0:20,0:19:45.14:0,45,673	1/1:8,21:31:59.93:979,60,0	1/1:3,5:9:3.01:74,3,0	1/1:5,1:30:59.97:886,60,0	1/1:4,0:23:27.07:457,27,0	1/1:10,0:30:12.03:183,12,0	1/1:5,2:28:24.08:419,24,0	1/1:11,32:45:99:2005,102,0	1/1:5,22:27:51.17:1240,51,0	1/1:1,13:15:18.06:443,18,0
chr10	20911380	.	GGAAA	G	584.87	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-0.718;DP=720;FS=6.148;HRun=0;HaplotypeScore=169.8385;InbreedingCoeff=0.7655;MQ=60.97;MQ0=7;MQRankSum=-0.198;QD=24.37;ReadPosRankSum=-3.614;VQSLOD=2.3632;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:39.46:0,39,552	0/0:19,0:19:57.19:0,57,1288	0/0:41,0:15:14.46:0,14,189	0/0:33,0:12:3.56:0,4,117	0/0:41,0:41:99:0,105,2308	0/0:19,0:19:45.15:0,45,979	0/0:14,0:14:15.05:0,15,316	1/1:8,16:23:48.13:680,48,0	0/0:14,0:14:30.10:0,30,606	0/0:30,0:30:66.23:0,66,1516	0/0:25,0:24:60.21:0,60,1394	0/0:24,0:24:48.15:0,48,961	0/0:18,0:18:45.14:0,45,1003	0/0:17,0:17:30.09:0,30,607	0/0:30,0:30:78.25:0,78,1741	0/0:26,0:26:60.20:0,60,1360	0/0:43,0:43:80.08:0,80,2148	0/0:25,0:25:48.16:0,48,1162	0/0:22,0:21:51.17:0,51,1157	0/0:28,0:28:69.23:0,69,1283	0/0:6,0:6:6.02:0,6,125	0/0:32,0:32:81.25:0,81,1547	0/0:23,0:23:36.12:0,36,729	0/0:25,0:25:25.90:0,26,410	0/0:25,0:25:39.13:0,39,836	0/0:44,0:43:99:0,114,2334	0/0:25,0:25:63.15:0,63,1494	0/0:19,0:19:33.10:0,33,667
chr10	20912301	.	A	AGTGTGTGT	7795.69	PASS	AB=0.571;AC=39;AF=0.696;AN=56;BaseQRankSum=-4.269;DP=695;FS=4.109;HRun=0;HaplotypeScore=204.5943;InbreedingCoeff=0.7258;MQ=64.64;MQ0=6;MQRankSum=-6.342;QD=15.44;ReadPosRankSum=-2.820;VQSLOD=3.7949;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:32,2:44:12.83:532,13,0	0/0:6,0:11:12.04:0,12,223	0/0:34,0:20:3.01:0,3,45	0/0:30,0:23:12.04:0,12,207	0/0:11,0:22:27.09:0,27,486	1/1:27,1:32:9.03:252,9,0	1/1:11,5:21:17.16:578,17,0	1/1:38,0:37:41.61:867,42,0	0/1:5,0:20:23.10:101,0,23	0/0:12,0:28:25.30:0,25,361	0/0:12,0:17:15.05:0,15,279	1/1:19,0:22:11.21:156,11,0	1/1:19,11:30:13.81:497,14,0	1/1:29,2:33:9.03:311,9,0	0/0:30,0:30:41.56:0,42,973	1/1:24,6:32:17.55:738,18,0	1/1:19,0:29:11.63:243,12,0	1/1:19,0:19:18.69:356,19,0	0/0:14,0:18:6.49:0,6,112	1/1:14,2:16:9.03:369,9,0	1/1:28,0:27:15.04:325,15,0	1/1:10,2:12:9.03:337,9,0	1/1:14,4:19:2.98:121,3,0	1/1:20,3:30:7.97:308,8,0	1/1:14,4:20:9.03:370,9,0	1/1:22,0:21:18.05:475,18,0	1/1:17,4:26:24.04:794,24,0	1/1:9,0:11:3.01:64,3,0
chr10	20912845	.	TGGTTC	T	1262.10	PASS	AB=0.895;AC=21;AF=0.389;AN=54;BaseQRankSum=3.825;DP=321;FS=33.560;HRun=0;HaplotypeScore=49.5109;InbreedingCoeff=-0.1482;MQ=38.61;MQ0=29;MQRankSum=-0.543;QD=8.83;ReadPosRankSum=3.971;VQSLOD=0.0998;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/1:5,0:4:6.07:6,0,85	0/0:31,0:3:5.80:0,6,44	0/0:30,0:7:5.06:0,5,42	0/0:17,0:15:6.70:0,7,358	1/1:7,1:6:6.02:85,6,0	0/1:9,2:9:36.91:117,0,37	0/0:31,0:31:42.95:0,43,1327	1/1:4,1:4:6.02:92,6,0	0/0:13,0:10:21.26:0,21,461	0/0:12,0:10:6.42:0,6,186	0/1:5,1:7:35.33:151,0,35	0/1:5,2:7:37.61:78,0,38	0/1:3,0:4:6.57:122,0,7	0/0:8,0:8:17.75:0,18,204	0/1:9,0:9:36.36:36,0,85	0/1:7,1:6:26.64:174,0,27	0/1:10,0:6:37.50:146,0,37	0/0:15,0:11:14.15:0,14,329	0/1:13,0:12:54.67:55,0,79	0/0:10,0:10:1.11:0,1,43	0/0:5,0:4:3:0,3,26	1/1:3,0:3:5.81:47,6,0	0/1:9,2:11:11.55:42,0,12	0/1:8,0:7:16.69:17,0,101	0/1:8,0:7:29.51:75,0,30	0/1:9,2:10:98.58:99,0,112	1/1:13,0:5:6.90:81,7,0
chr10	20912846	.	GGTTCT	G	1214.13	PASS	AB=0.874;AC=22;AF=0.407;AN=54;BaseQRankSum=6.706;DP=319;FS=22.970;HRun=0;HaplotypeScore=49.7138;InbreedingCoeff=-0.1118;MQ=38.56;MQ0=28;MQRankSum=1.143;QD=7.06;ReadPosRankSum=5.850;VQSLOD=-0.2266;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/1:6,0:4:5.99:6,0,100	0/0:32,0:3:5.85:0,6,45	0/1:29,0:7:1.26:1,0,37	0/0:17,0:15:23.78:0,24,422	1/1:7,1:6:6.02:82,6,0	0/1:8,2:8:15.96:130,0,16	0/0:32,0:31:67.09:0,67,1341	1/1:4,0:4:6.02:89,6,0	0/0:13,0:10:24.04:0,24,576	0/0:12,0:10:7.69:0,8,254	0/1:4,2:7:15.37:126,0,15	0/1:6,1:7:20.43:95,0,20	0/1:2,0:4:7.16:84,0,7	0/0:8,0:8:18.06:0,18,316	0/1:8,1:9:45.31:58,0,45	0/1:6,1:6:12.03:143,0,12	0/1:8,2:6:25.51:138,0,26	0/0:14,0:10:24.05:0,24,471	0/1:13,0:12:54:81,0,54	0/0:11,0:10:6.08:0,6,30	0/0:4,0:4:2.88:0,3,15	1/1:4,0:3:5.99:52,6,0	0/1:10,0:11:5.19:30,0,5	0/1:7,0:7:10.76:11,0,62	0/1:7,1:8:47.47:87,0,47	0/1:11,0:10:69.17:81,0,69	1/1:12,0:5:6.02:80,6,0
chr10	20912847	.	GTTCT	G	1274.93	PASS	AB=0.946;AC=23;AF=0.442;AN=52;BaseQRankSum=5.498;DP=316;FS=8.509;HRun=0;HaplotypeScore=46.4307;InbreedingCoeff=0.1656;MQ=38.56;MQ0=26;MQRankSum=0.317;QD=9.44;ReadPosRankSum=5.653;VQSLOD=-0.1163;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/0:6,0:4:11.18:0,11,106	0/0:33,0:3:1.52:0,2,26	0/0:27,0:7:2.60:0,3,31	0/0:16,0:14:20.98:0,21,325	1/1:7,1:6:6.02:86,6,0	1/1:8,2:8:0.06:147,0,0	0/0:32,0:31:70.64:0,71,1284	1/1:4,1:4:6.02:76,6,0	0/0:13,0:10:24.04:0,24,511	0/0:13,0:11:12.04:0,12,240	0/1:6,0:6:0.28:129,0,0	0/1:7,0:7:5.95:101,0,6	0/1:4,0:4:5.93:60,0,6	0/0:8,0:8:18.05:0,18,294	0/1:8,1:9:5.95:102,0,6	1/1:6,2:6:1.75:131,2,0	0/1:9,1:6:4.94:144,0,5	0/0:14,0:10:21.07:0,21,424	0/1:10,3:12:23.93:93,0,24	0/0:11,0:10:0.47:0,0,1	./.	1/1:4,0:3:5.91:54,6,0	1/1:10,1:11:5.69:38,6,0	0/1:7,1:7:14.59:15,0,23	0/1:9,0:8:49.39:114,0,49	0/1:11,0:10:25.04:56,0,25	1/1:11,1:4:6.02:85,6,0
chr10	20916033	.	G	GC	5857.81	PASS	AB=1.000;AC=39;AF=0.696;AN=56;BaseQRankSum=9.188;DP=573;FS=0.815;HRun=5;HaplotypeScore=141.7148;InbreedingCoeff=0.9057;MQ=70.69;MQ0=4;MQRankSum=-4.300;QD=14.01;ReadPosRankSum=3.538;VQSLOD=3.2120;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:33,0:33:71.63:599,72,0	0/0:8,0:8:24.04:0,24,242	0/0:24,0:15:24.70:0,25,208	0/0:22,0:16:31.90:0,32,306	0/0:25,0:25:68.24:0,68,653	1/1:21,0:21:32.90:264,33,0	1/1:17,0:17:20.97:174,21,0	0/1:27,0:27:42.65:43,0,182	1/1:28,0:28:53.51:438,54,0	0/0:16,0:16:48.08:0,48,490	0/0:20,0:20:48.42:0,48,459	1/1:14,0:14:29.94:245,30,0	1/1:12,0:12:29.86:233,30,0	1/1:17,0:17:35.94:293,36,0	0/0:13,0:12:33.05:0,33,332	1/1:26,0:26:35.93:294,36,0	1/1:21,0:21:34.90:264,35,0	1/1:9,0:9:14.96:120,15,0	0/0:26,0:26:63.08:0,63,628	1/1:26,0:26:62.67:486,63,0	1/1:20,0:20:17.97:156,18,0	1/1:13,1:14:38.81:328,39,0	1/1:19,1:20:50.70:392,51,0	1/1:16,1:17:12.56:123,13,0	1/1:28,1:29:47.68:376,48,0	1/1:20,0:20:53.89:456,54,0	1/1:24,0:23:41.74:327,42,0	1/1:23,0:23:29.96:248,30,0
chr10	20916038	.	C	CCT	13526.75	PASS	AB=0.600;AC=39;AF=0.696;AN=56;BaseQRankSum=5.884;DP=575;FS=2.278;HRun=0;HaplotypeScore=127.2979;InbreedingCoeff=0.9064;MQ=66.13;MQ0=5;MQRankSum=-3.888;QD=31.90;ReadPosRankSum=3.143;VQSLOD=7.1768;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:20,10:30:79.35:1261,79,0	0/0:8,0:8:24.02:0,24,304	0/0:22,0:11:26.81:0,27,304	0/0:20,0:14:32.03:0,32,398	0/0:26,0:26:66.89:0,67,768	1/1:2,21:23:36.11:668,36,0	1/1:2,15:17:12.39:415,12,0	0/1:10,0:30:49.31:49,0,192	1/1:2,24:28:56.68:1045,57,0	0/0:17,0:17:50.64:0,51,639	0/0:20,0:20:47.76:0,48,443	1/1:1,12:13:33.10:614,33,0	1/1:5,6:11:33.09:559,33,0	1/1:0,17:17:36.12:708,36,0	0/0:13,0:12:35.96:0,36,415	1/1:4,21:27:45.11:755,45,0	1/1:2,18:20:38.14:644,38,0	1/1:6,4:10:26.90:339,27,0	0/0:25,0:25:65.49:0,65,821	1/1:1,26:27:62.96:1062,63,0	1/1:0,19:19:18.06:329,18,0	1/1:3,12:15:38.96:665,39,0	1/1:12,9:21:56.90:892,57,0	1/1:2,14:16:15.05:283,15,0	1/1:3,26:31:51.09:894,51,0	1/1:3,19:22:57.08:912,57,0	1/1:2,20:22:44.65:816,45,0	1/1:1,23:24:33.09:617,33,0
chr10	20916046	.	T	TCTTCCTTC	7646.28	PASS	AB=1.000;AC=50;AF=0.962;AN=52;BaseQRankSum=-0.657;DP=556;FS=10.250;HRun=0;HaplotypeScore=215.3187;InbreedingCoeff=-0.0635;MQ=58.92;MQ0=7;MQRankSum=-5.853;QD=14.73;ReadPosRankSum=2.610;VQSLOD=2.8510;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:31:10.72:161,11,0	1/1:5,1:6:3.01:122,3,0	./.	./.	1/1:15,7:24:24.54:826,25,0	1/1:23,0:23:16.11:148,16,0	1/1:16,0:16:20.48:217,20,0	1/1:31,0:31:27.09:701,27,0	1/1:23,0:22:17.52:190,18,0	1/1:12,4:17:15.52:559,16,0	1/1:8,11:22:27.09:1101,27,0	1/1:15,0:15:18.36:207,18,0	1/1:11,0:13:5.63:155,6,0	1/1:16,0:16:23.12:199,23,0	1/1:5,0:9:11.97:97,12,0	0/1:25,0:25:24.19:60,0,24	1/1:20,0:21:15.18:141,15,0	0/1:9,0:11:8.79:24,0,9	1/1:19,5:27:33.11:1176,33,0	1/1:24,0:24:18.65:253,19,0	1/1:19,0:19:8.91:88,9,0	1/1:17,0:17:22.53:140,23,0	1/1:15,0:21:9.60:196,10,0	1/1:17,0:17:8.12:56,8,0	1/1:25,0:25:38.72:356,39,0	1/1:18,0:18:18.28:139,18,0	1/1:21,0:20:33.28:282,33,0	1/1:25,0:25:8.47:51,8,0
chr10	20916065	.	T	TCATC	19005.91	PASS	AB=0.947;AC=43;AF=0.768;AN=56;BaseQRankSum=4.544;DP=520;FS=4.444;HRun=0;HaplotypeScore=123.1672;InbreedingCoeff=0.3340;MQ=53.31;MQ0=7;MQRankSum=-4.629;QD=40.79;ReadPosRankSum=6.922;VQSLOD=4.6675;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,24:35:63.13:1355,63,0	0/0:5,0:5:0.02:0,0,187	0/0:21,0:10:16.10:0,16,160	0/1:14,0:7:8.56:9,0,83	0/1:23,0:23:80.61:81,0,368	1/1:10,8:18:39.12:914,39,0	1/1:10,6:16:39.13:827,39,0	0/0:28,0:28:10.99:0,11,488	1/1:8,11:18:54.18:1216,54,0	0/1:14,0:14:1.89:2,0,316	0/1:16,0:16:99:108,0,138	1/1:9,8:17:45.14:1005,45,0	1/1:2,13:16:30.10:754,30,0	1/1:11,7:18:48.16:1040,48,0	0/1:11,0:10:52.25:52,0,242	1/1:14,7:21:54.18:1137,54,0	1/1:15,8:23:66.11:1151,66,0	0/1:7,10:17:71.14:535,0,71	0/1:21,0:20:2.68:3,0,496	1/1:12,9:22:60.12:1257,60,0	1/1:15,1:16:30.03:405,30,0	1/1:12,7:19:54.18:1114,54,0	1/1:4,14:19:48.16:1130,48,0	1/1:12,2:14:17.89:329,18,0	1/1:14,14:28:78.25:1714,78,0	1/1:14,4:18:54.13:1100,54,0	1/1:9,9:17:47.61:1137,48,0	1/1:11,2:13:36.02:633,36,0
chr10	20916810	.	CA	C	12591.92	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=15.737;DP=672;FS=3.916;HRun=3;HaplotypeScore=111.9428;InbreedingCoeff=0.9995;MQ=76.03;MQ0=1;MQRankSum=-1.770;QD=33.22;ReadPosRankSum=4.041;VQSLOD=4.5661;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,35:35:99:1223,99,0	0/0:9,0:9:27.09:0,27,388	0/0:22,0:22:62.92:0,63,787	0/0:23,0:22:37.61:0,38,402	0/0:23,0:23:63.21:0,63,903	1/1:0,18:18:48.15:594,48,0	1/1:1,21:22:60.19:743,60,0	0/0:23,0:23:60.11:0,60,449	1/1:0,23:23:63.03:775,63,0	0/0:30,0:30:90.30:0,90,1277	0/0:17,0:17:45.15:0,45,648	1/1:0,19:19:54.17:669,54,0	1/1:0,23:23:57.18:706,57,0	1/1:1,24:25:63.20:780,63,0	0/0:30,0:30:87.28:0,87,1224	0/0:40,0:40:99:0,114,897	0/0:32,0:32:86.78:0,87,699	0/0:22,0:22:65.76:0,66,517	0/0:22,0:22:66.19:0,66,890	1/1:0,24:24:69.22:853,69,0	1/1:0,28:28:75.24:928,75,0	1/1:1,29:30:81.25:998,81,0	1/1:0,13:13:33.10:409,33,0	1/1:2,24:26:69.22:854,69,0	1/1:0,19:19:54.17:665,54,0	1/1:0,27:27:81.24:986,81,0	1/1:1,34:35:90.23:1114,90,0	1/1:0,12:12:24.08:297,24,0
chr10	20917395	.	A	ATT	2269.17	PASS	AB=0.606;AC=41;AF=0.732;AN=56;BaseQRankSum=2.896;DP=582;FS=3.598;HRun=13;HaplotypeScore=99.8032;InbreedingCoeff=0.1590;MQ=73.25;MQ0=0;MQRankSum=-4.049;QD=4.31;ReadPosRankSum=0.145;VQSLOD=0.2387;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:47:9.21:159,9,0	1/1:1,0:6:12.48:43,12,0	0/0:23,0:22:12.15:0,12,137	0/0:10,0:8:14.69:0,15,108	0/1:8,0:17:5.57:25,0,6	0/1:6,0:26:9.70:85,0,10	0/1:4,0:16:5.96:40,0,6	1/1:19,14:38:53.93:584,54,0	1/1:9,0:16:14.51:50,15,0	1/1:14,1:28:15.25:173,15,0	1/1:7,0:16:9.98:35,10,0	1/1:3,0:10:12.95:55,13,0	1/1:3,0:22:29.94:104,30,0	0/1:6,0:16:24.79:25,0,34	0/0:20,0:21:35.55:0,36,324	0/1:8,0:22:46.43:46,0,48	1/1:12,0:34:8.89:86,9,0	1/1:2,0:19:22.46:78,22,0	0/1:9,2:21:60.39:166,0,60	1/1:6,2:26:39.66:184,40,0	0/1:5,0:16:8.46:34,0,8	1/1:2,0:16:26.66:101,27,0	0/1:7,0:25:27.35:44,0,27	1/1:7,1:27:7.12:109,7,0	1/1:2,0:14:13.44:66,13,0	1/1:9,0:20:25.43:98,25,0	0/1:7,0:17:24.87:25,0,34	1/1:7,0:12:7.49:26,7,0
chr10	20918188	.	GCATACATA	G	1006.64	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.199;DP=606;FS=13.766;HRun=0;HaplotypeScore=147.7014;InbreedingCoeff=0.8130;MQ=58.95;MQ0=6;MQRankSum=0.563;QD=30.50;ReadPosRankSum=-2.962;VQSLOD=2.2375;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:60.19:0,60,1816	0/0:11,0:11:33.10:0,33,932	0/0:18,0:9:1.74:0,2,331	0/0:23,0:6:15.04:0,15,204	0/0:32,0:32:93.32:0,93,3365	0/0:23,0:23:63.20:0,63,2256	0/0:18,0:18:45.14:0,45,1303	1/1:9,24:31:66.13:1101,66,0	0/0:24,0:25:72.20:0,72,2188	0/0:25,0:25:75.24:0,75,2199	0/0:16,0:16:42.14:0,42,1479	0/0:10,0:10:27.09:0,27,1017	0/0:25,0:25:72.25:0,72,2182	0/0:12,0:12:33.10:0,33,1059	0/0:29,0:29:75.26:0,75,2417	0/0:17,0:17:33.11:0,33,1157	0/0:32,0:32:81.75:0,82,2682	0/0:27,0:27:75.21:0,75,2180	0/0:19,0:17:45.10:0,45,1164	0/0:24,0:23:63.22:0,63,2136	0/0:14,0:14:39.12:0,39,1259	0/0:19,0:19:54.19:0,54,1754	0/0:18,0:18:51.17:0,51,1650	0/0:18,0:18:45.10:0,45,990	0/0:31,0:31:87.27:0,87,2946	0/0:27,0:27:78.26:0,78,2580	0/0:16,0:16:39.13:0,39,1497	0/0:16,0:16:39.08:0,39,1182
chr10	20919133	.	ACACACACACACACACACG	A	1709.24	PASS	AB=0.983;AC=20;AF=0.370;AN=54;BaseQRankSum=1.488;DP=526;FS=12.182;HRun=0;HaplotypeScore=185.7309;InbreedingCoeff=-0.1015;MQ=47.98;MQ0=28;MQRankSum=2.100;QD=5.16;ReadPosRankSum=-4.081;VQSLOD=0.9436;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:34,0:32:40.86:141,0,41	0/0:7,0:7:15.05:0,15,562	0/0:15,0:1:3.01:0,3,71	0/0:41,0:9:14.88:0,15,208	0/0:14,0:13:21.07:0,21,981	0/1:17,1:18:39.04:131,0,39	0/1:23,0:21:30.71:39,0,31	0/1:28,0:28:35.57:36,0,1014	1/1:14,2:14:8.97:376,9,0	0/0:20,0:19:30.08:0,30,903	0/0:15,0:15:20.55:0,21,740	1/1:13,0:12:0.46:1,0,0	1/1:19,0:17:8.85:167,9,0	0/0:8,0:7:2.99:0,3,23	0/0:17,0:17:24.06:0,24,959	0/1:13,0:13:3.21:3,0,81	0/1:38,0:37:99:130,0,547	0/0:22,0:21:4.78:0,5,32	0/0:16,0:15:35.44:0,35,807	0/1:7,0:7:15.96:16,0,37	0/1:48,1:46:89.54:347,0,90	1/1:10,0:8:6:155,6,0	0/1:10,1:11:51.19:140,0,51	0/1:19,1:19:30.84:63,0,31	0/0:15,0:15:2.20:0,2,41	0/1:15,0:15:21.51:87,0,22	./.	0/1:17,0:15:35:35,0,90
chr10	20919135	.	ACACACACACACACACG	A	2327.33	PASS	AB=1.000;AC=28;AF=0.538;AN=52;BaseQRankSum=-0.065;DP=526;FS=14.525;HRun=0;HaplotypeScore=170.6082;InbreedingCoeff=0.3897;MQ=48.13;MQ0=29;MQRankSum=2.760;QD=6.63;ReadPosRankSum=-4.265;VQSLOD=0.4553;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:34,0:32:20.29:209,20,0	0/0:7,0:7:15.05:0,15,460	0/0:16,0:1:3.01:0,3,76	0/0:37,0:7:14.84:0,15,162	0/0:14,0:13:21.05:0,21,787	1/1:8,10:18:5.95:126,6,0	0/1:24,0:22:7.94:62,0,8	0/1:29,0:29:55.37:55,0,784	1/1:15,1:14:8.75:355,9,0	0/0:18,0:17:21.03:0,21,634	0/0:15,0:15:20.75:0,21,668	1/1:12,1:12:0.47:1,0,0	1/1:10,8:17:8.86:256,9,0	./.	0/0:19,0:19:26.99:0,27,799	0/1:14,0:14:19.76:50,0,20	0/1:40,0:39:99:301,0,336	0/0:21,0:20:2.24:0,2,5	0/0:15,0:14:34.82:0,35,612	1/1:7,0:7:2.98:22,3,0	1/1:50,0:47:46.95:416,47,0	1/1:9,0:7:6.01:141,6,0	0/1:9,0:9:11.96:110,0,12	1/1:22,0:21:14.56:122,15,0	1/1:8,7:15:0.89:2,1,0	0/1:15,0:15:0.40:131,0,0	./.	1/1:17,0:15:6.02:140,6,0
chr10	20919141	.	ACACACACACG	A	2621.88	PASS	AB=1.000;AC=41;AF=0.732;AN=56;BaseQRankSum=-1.568;DP=525;FS=4.674;HRun=0;HaplotypeScore=131.6747;InbreedingCoeff=0.4304;MQ=50.51;MQ0=31;MQRankSum=2.875;QD=6.46;ReadPosRankSum=-3.586;VQSLOD=0.9007;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:36,0:34:20.48:210,20,0	0/1:7,0:7:9.98:10,0,202	0/0:25,0:4:5.08:0,5,62	0/0:34,0:9:6.20:0,6,126	0/0:14,0:13:23.96:0,24,466	1/1:17,0:17:5.95:84,6,0	1/1:26,0:24:24.43:197,24,0	0/1:28,0:28:99:104,0,232	1/1:14,0:12:8.69:211,9,0	0/0:15,0:14:13.23:0,13,286	0/0:13,0:13:6.88:0,7,368	1/1:11,0:10:0.47:1,0,0	1/1:17,0:15:8.86:135,9,0	1/1:9,0:8:3:25,3,0	0/0:17,0:17:20.80:0,21,434	1/1:3,13:16:2.29:93,2,0	1/1:40,0:39:0.11:622,0,0	1/1:5,18:22:2.21:93,2,0	0/1:15,0:13:20.28:20,0,347	1/1:8,0:8:5.98:47,6,0	1/1:50,0:47:18.48:369,18,0	1/1:10,0:8:9:124,9,0	1/1:7,0:7:6.01:99,6,0	1/1:23,0:22:17.54:147,18,0	1/1:14,0:14:0.13:0,0,0	1/1:14,0:14:16.52:147,17,0	1/1:7,0:7:5.99:50,6,0	1/1:14,0:12:0.80:2,1,0
chr10	20919149	.	ACG	A	2766.36	PASS	AB=1.000;AC=39;AF=0.750;AN=52;BaseQRankSum=0.866;DP=450;FS=0.000;HRun=0;HaplotypeScore=74.6596;InbreedingCoeff=0.1459;MQ=56.15;MQ0=29;MQRankSum=1.326;QD=7.17;ReadPosRankSum=0.675;VQSLOD=2.9932;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:20:26.74:239,27,0	0/1:6,0:6:33.01:33,0,56	0/1:32,0:11:14.28:14,0,123	0/0:41,0:15:13.61:0,14,187	0/1:15,0:15:27.28:27,0,146	1/1:12,0:12:5.95:61,6,0	1/1:21,0:19:31.51:251,32,0	0/1:31,0:31:13.26:235,0,13	1/1:9,0:7:11.93:106,12,0	0/1:8,0:7:31.22:31,0,56	0/0:11,0:11:8.08:0,8,138	./.	1/1:11,0:9:7.10:27,7,0	1/1:2,0:1:3:25,3,0	0/1:16,0:16:8.19:8,0,174	0/1:15,0:15:0.67:16,0,1	1/1:39,0:39:73.13:570,73,0	1/1:20,0:19:3.45:21,3,0	0/1:24,0:21:1.02:1,0,221	1/1:6,0:6:11.97:97,12,0	1/1:46,0:43:77.16:600,77,0	1/1:8,0:7:10.75:73,11,0	1/1:3,0:3:8.94:68,9,0	1/1:16,0:15:20.90:172,21,0	./.	1/1:0,8:9:20.29:190,20,0	1/1:5,0:5:5.99:50,6,0	0/1:8,0:7:0.25:0,0,1
chr10	20919151	.	GCA	G	615.84	PASS	AB=0.994;AC=19;AF=0.380;AN=50;BaseQRankSum=2.655;DP=443;FS=1.751;HRun=0;HaplotypeScore=83.0435;InbreedingCoeff=0.2787;MQ=57.97;MQ0=27;MQRankSum=0.148;QD=3.35;ReadPosRankSum=2.407;VQSLOD=1.3032;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:19:0.90:2,1,0	0/0:6,0:6:6.02:0,6,91	0/1:32,1:12:2.08:2,0,344	0/0:44,0:18:42.22:0,42,490	0/0:14,0:14:23.91:0,24,319	1/1:12,0:12:3:25,3,0	0/0:21,0:19:5.89:0,6,50	1/1:11,21:32:53.21:624,53,0	0/1:8,0:8:13.41:33,0,13	0/0:7,0:6:12.03:0,12,163	0/0:11,0:11:24.07:0,24,338	./.	1/1:10,0:9:0.94:2,1,0	./.	0/1:14,0:14:11.81:12,0,296	1/1:14,0:14:2.80:13,3,0	0/0:37,0:36:0.83:0,1,36	1/1:19,0:18:2.80:13,3,0	0/0:24,0:21:42.13:0,42,595	0/0:5,0:5:0.36:0,0,1	0/0:47,0:44:0.71:0,1,39	0/1:8,0:6:7.69:8,0,14	1/1:3,0:3:2.80:13,3,0	0/0:17,0:16:2.19:0,2,23	0/0:8,0:8:2.99:0,3,25	0/1:9,0:9:0.05:0,0,0	./.	0/0:6,0:5:2.98:0,3,22
chr10	20921476	.	CGTGT	C	3133.97	PASS	AB=0.770;AC=47;AF=0.904;AN=52;BaseQRankSum=1.721;DP=520;FS=4.700;HRun=0;HaplotypeScore=95.5278;InbreedingCoeff=0.1448;MQ=57.60;MQ0=13;MQRankSum=0.541;QD=6.81;ReadPosRankSum=2.021;VQSLOD=2.0800;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:20,5:25:3.01:46,3,0	1/1:3,0:3:3.01:45,3,0	./.	./.	1/1:21,7:29:8.92:109,9,0	1/1:6,5:11:5.05:52,5,0	1/1:14,10:24:11.47:226,11,0	0/0:26,0:26:3.01:0,3,35	1/1:10,1:11:6.01:74,6,0	1/1:23,8:31:21.09:286,21,0	1/1:11,6:18:11.99:158,12,0	1/1:9,5:14:14.94:187,15,0	1/1:5,6:11:6.02:93,6,0	0/1:4,0:8:0:0,0,0	0/1:13,2:15:26.01:26,0,295	1/1:7,0:14:15.01:138,15,0	1/1:18,0:21:11.98:104,12,0	0/1:13,0:19:32.29:47,0,32	1/1:22,2:21:6.02:93,6,0	1/1:17,2:18:11.23:125,11,0	1/1:16,2:19:2.42:141,2,0	1/1:8,8:16:6.02:93,6,0	1/1:14,1:16:10.82:101,11,0	1/1:20,13:33:12.04:186,12,0	1/1:9,13:23:14.99:186,15,0	1/1:10,8:19:16.43:256,16,0	1/1:9,4:13:11.25:146,11,0	1/1:8,10:18:21.07:325,21,0
chr10	20921786	.	A	AT	13321.30	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-12.929;DP=582;FS=15.829;HRun=3;HaplotypeScore=55.2098;InbreedingCoeff=0.9962;MQ=63.91;MQ0=0;MQRankSum=1.146;QD=33.55;ReadPosRankSum=6.056;VQSLOD=3.1860;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,39:41:90.30:1257,90,0	0/0:5,0:5:15.05:0,15,178	0/0:17,0:16:35.31:0,35,395	0/0:14,0:11:19.88:0,20,221	0/0:34,0:34:99:0,99,1146	1/1:0,25:25:60.20:838,60,0	1/1:2,16:18:42.14:587,42,0	0/0:34,0:34:90.23:0,90,1024	1/1:1,20:21:54.18:745,54,0	0/0:29,0:29:80.79:0,81,896	0/0:11,0:11:33.02:0,33,376	1/1:1,17:19:42.09:564,42,0	1/1:2,20:22:60.20:836,60,0	1/1:3,14:17:35.48:469,35,0	0/0:22,0:22:57.16:0,57,673	1/1:0,22:22:60.20:839,60,0	1/1:3,24:26:57.19:796,57,0	1/1:2,13:15:39.08:518,39,0	0/0:19,0:19:57.13:0,57,630	1/1:2,12:14:36.02:452,36,0	1/1:1,14:15:33.11:459,33,0	1/1:2,11:13:30.01:394,30,0	1/1:0,13:13:33:432,33,0	1/1:1,16:17:45.15:629,45,0	1/1:1,14:15:42.14:586,42,0	1/1:0,37:37:99:1496,111,0	1/1:2,28:30:75.25:1047,75,0	1/1:0,16:16:27.09:376,27,0
chr10	20922143	.	TTG	T	783.81	PASS	AB=0.716;AC=35;AF=0.700;AN=50;BaseQRankSum=3.331;DP=147;FS=14.243;HRun=0;HaplotypeScore=32.5492;InbreedingCoeff=-0.0723;MQ=72.99;MQ0=0;MQRankSum=-2.857;QD=6.17;ReadPosRankSum=3.043;VQSLOD=1.0054;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,6:8:12.78:101,13,0	1/1:1,1:2:3:27,3,0	0/1:8,0:8:19.29:20,0,19	0/1:6,0:6:19.94:20,0,35	./.	1/1:3,4:7:8.48:61,8,0	0/1:2,7:9:8.50:79,0,9	0/1:4,4:8:18.62:38,0,19	1/1:0,5:5:3:26,3,0	1/1:1,6:7:6.64:96,7,0	./.	0/1:1,5:6:17.71:29,0,18	0/0:1,0:1:0:0,0,0	0/1:3,5:8:0.55:1,0,8	1/1:3,0:3:3.63:13,4,0	0/1:2,2:4:21.59:22,0,29	0/0:7,0:7:6.87:0,7,64	1/1:1,5:6:14.38:124,14,0	1/1:0,2:2:5.95:53,6,0	1/1:0,1:1:0.47:1,0,0	0/0:7,0:7:3.13:0,3,25	1/1:3,1:4:5.67:30,6,0	1/1:4,1:5:2:25,2,0	0/1:3,3:6:17.04:18,0,17	1/1:1,3:4:4.33:30,4,0	0/1:8,5:13:26.08:77,0,26	1/1:3,2:5:2.65:27,3,0	./.
chr10	20922148	.	G	GT	125.04	PASS	AB=0.742;AC=9;AF=0.188;AN=48;BaseQRankSum=2.232;DP=127;FS=2.391;HRun=0;HaplotypeScore=31.7842;InbreedingCoeff=-0.0869;MQ=65.06;MQ0=0;MQRankSum=-4.251;QD=2.66;ReadPosRankSum=0.315;VQSLOD=1.7893;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:8:20.76:0,21,144	0/0:1,0:1:2.98:0,3,21	0/0:6,0:6:18.01:0,18,183	0/0:5,0:5:11.22:0,11,96	./.	0/1:4,2:7:40.32:40,0,47	0/0:7,1:8:10.35:0,10,81	0/0:7,0:7:14.32:0,14,106	0/0:5,0:5:2.99:0,3,23	0/1:6,1:7:12.74:13,0,78	./.	0/0:5,0:5:2.75:0,3,13	./.	1/1:6,2:8:4.68:46,5,0	0/1:2,1:3:20.63:25,0,21	0/0:3,1:4:4.93:0,5,29	0/0:4,0:4:1.25:0,1,3	0/0:5,0:5:14.95:0,15,118	0/0:2,0:2:6:0,6,52	0/0:1,0:1:2.96:0,3,19	0/0:5,0:5:1.25:0,1,3	0/1:1,2:4:14.21:42,0,14	0/0:1,3:5:3.44:0,3,22	0/0:4,0:4:6:0,6,54	0/1:3,0:4:23.45:23,0,26	0/1:8,2:10:17.84:18,0,120	0/1:2,2:4:13.97:42,0,14	./.
chr10	20922149	.	G	GGGT	1385.10	PASS	AB=0.917;AC=44;AF=0.917;AN=48;BaseQRankSum=-2.902;DP=124;FS=15.281;HRun=0;HaplotypeScore=30.1567;InbreedingCoeff=-0.0478;MQ=65.18;MQ0=0;MQRankSum=-2.402;QD=11.74;ReadPosRankSum=1.351;VQSLOD=0.8551;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,0:7:11.90:134,12,0	1/1:1,0:1:3.01:45,3,0	0/1:6,0:6:4.61:34,0,5	0/1:4,1:5:5.21:64,0,5	./.	1/1:7,0:7:13.29:77,13,0	1/1:8,0:8:8.65:93,9,0	1/1:7,0:7:3.61:92,4,0	1/1:5,0:5:3:25,3,0	1/1:7,0:7:14.55:128,15,0	./.	1/1:5,0:5:2.90:25,3,0	./.	1/1:8,0:8:3.91:15,4,0	1/1:3,0:3:2.79:22,3,0	1/1:4,0:4:7.67:69,8,0	1/1:4,0:4:3.01:36,3,0	1/1:5,0:5:15:183,15,0	1/1:2,0:2:5.97:65,6,0	0/0:1,0:1:0:0,0,0	1/1:0,5:5:3.01:65,3,0	1/1:4,0:4:8.30:50,8,0	1/1:5,0:5:3.22:47,3,0	1/1:3,0:3:2.96:19,3,0	1/1:4,0:4:5.95:44,6,0	1/1:9,0:9:9.48:81,9,0	1/1:4,0:4:8.70:56,9,0	./.
chr10	20922156	.	G	GA	94.42	PASS	AB=0.688;AC=12;AF=0.286;AN=42;BaseQRankSum=1.220;DP=89;FS=0.000;HRun=0;HaplotypeScore=26.5690;InbreedingCoeff=0.0422;MQ=50.06;MQ0=0;MQRankSum=-1.927;QD=2.30;ReadPosRankSum=2.854;VQSLOD=1.3553;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:6:7.39:0,7,28	0/0:1,0:1:2.60:0,3,10	./.	0/0:3,0:3:5.99:0,6,53	./.	0/1:4,2:7:11.36:41,0,11	0/0:7,1:8:8.08:0,8,43	0/0:5,0:5:11.68:0,12,69	0/0:2,0:2:2.74:0,3,12	0/1:5,0:6:8.71:9,0,61	./.	./.	./.	0/1:4,1:6:1.08:1,0,8	1/1:0,0:1:3.01:30,3,0	0/1:2,2:4:4.89:39,0,5	1/1:1,0:1:2.94:18,3,0	0/0:4,0:4:11.61:0,12,71	0/0:1,0:1:2.97:0,3,20	./.	0/0:1,0:1:2.37:0,2,8	0/1:1,3:4:8.92:22,0,9	0/1:1,4:5:2.93:7,0,3	0/0:2,0:2:2.99:0,3,23	0/1:3,1:4:5.85:35,0,6	0/0:3,0:5:2.58:0,3,31	0/1:1,0:3:2.03:9,0,2	./.
chr10	20923099	.	TAGA	T	263.49	PASS	AB=0.875;AC=17;AF=0.531;AN=32;BaseQRankSum=2.987;DP=154;FS=28.274;HRun=0;HaplotypeScore=21.6852;InbreedingCoeff=0.4955;MQ=32.71;MQ0=39;MQRankSum=-2.923;QD=5.49;ReadPosRankSum=0.813;VQSLOD=0.3307;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:17,0:4:11.63:0,12,135	0/0:25,0:10:26.99:0,27,392	./.	1/1:3,1:2:5.98:56,6,0	1/1:7,0:3:2.09:13,2,0	0/1:12,2:8:34.32:34,0,272	1/1:4,2:5:6.02:73,6,0	0/0:4,0:4:10.85:0,11,141	0/0:4,0:3:5.69:0,6,60	./.	0/0:1,0:1:2.74:0,3,12	1/1:6,1:7:9.03:104,9,0	0/0:4,0:4:9.02:0,9,136	1/1:0,2:2:3.01:38,3,0	1/1:1,2:2:3.01:37,3,0	1/1:2,0:2:2.96:19,3,0	0/0:15,0:7:17.31:0,17,174	./.	./.	./.	./.	./.	./.	./.	1/1:3,0:2:2.92:17,3,0	./.
chr10	20923356	.	CAGTG	C	17732.12	PASS	AB=0.529;AC=37;AF=0.661;AN=56;BaseQRankSum=12.206;DP=479;FS=10.031;HRun=0;HaplotypeScore=94.7704;InbreedingCoeff=0.8936;MQ=90.54;MQ0=0;MQRankSum=-7.348;QD=53.41;ReadPosRankSum=5.642;VQSLOD=5.5738;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,38:37:99:2137,102,0	0/0:6,0:6:15.05:0,15,435	0/0:15,0:15:41.97:0,42,1064	0/0:28,0:28:75.23:0,75,1911	0/0:6,0:6:18.06:0,18,522	1/1:0,16:16:39.13:817,39,0	1/1:0,27:27:69.24:1425,69,0	0/0:25,0:25:75.26:0,75,2096	1/1:0,26:26:72.09:1506,72,0	0/0:17,0:17:51.17:0,51,1437	0/0:7,0:7:21.07:0,21,607	1/1:0,15:16:45.15:939,45,0	1/1:0,16:16:42.14:880,42,0	1/1:0,21:21:57.20:1190,57,0	0/0:15,0:15:45.14:0,45,1242	1/1:0,17:17:39.13:816,39,0	1/1:0,29:29:75.26:1545,75,0	1/1:0,17:17:48.16:1005,48,0	0/0:28,0:28:84.29:0,84,2404	1/1:0,7:7:21.07:439,21,0	1/1:0,25:25:63.22:1313,63,0	1/1:0,9:9:18.06:377,18,0	1/1:0,5:5:11.83:251,12,0	1/1:0,22:22:48.16:1005,48,0	1/1:0,8:8:24.08:503,24,0	0/1:2,16:18:99:887,0,123	1/1:0,13:13:30.10:574,30,0	1/1:0,2:2:6.02:126,6,0
chr10	20923820	.	ATCT	A	20553.49	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=20.099;DP=789;FS=7.049;HRun=0;HaplotypeScore=179.9804;InbreedingCoeff=0.9984;MQ=78.41;MQ0=0;MQRankSum=-7.490;QD=38.71;ReadPosRankSum=6.314;VQSLOD=5.3083;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,49:49:99:1736,111,0	0/0:18,0:18:51.18:0,51,1123	0/0:23,0:23:60.21:0,60,1221	0/0:22,0:22:53.91:0,54,1034	0/0:27,0:27:78.27:0,78,1742	1/1:0,17:17:51.17:833,51,0	1/1:1,30:31:69.23:1099,69,0	0/0:46,0:46:99:0,126,2606	1/1:0,39:39:99:1663,102,0	0/0:33,0:33:93.32:0,93,2051	0/0:19,0:19:57.18:0,57,1195	1/1:3,34:37:87.30:1419,87,0	1/1:0,24:24:69.24:1126,69,0	1/1:2,22:24:66.16:1046,66,0	0/0:40,0:40:99:0,111,2322	1/1:1,29:30:72.24:1150,72,0	1/1:1,23:24:54.18:869,54,0	1/1:0,22:22:60.20:965,60,0	0/0:30,0:30:84.29:0,84,1837	1/1:2,20:22:48.10:752,48,0	1/1:5,43:48:99:1512,99,0	1/1:0,17:17:48.16:738,48,0	1/1:1,18:19:44.99:734,45,0	1/1:3,27:30:69.17:1095,69,0	1/1:1,22:23:57.19:916,57,0	1/1:4,29:33:17.22:1211,17,0	1/1:1,28:29:72.25:1163,72,0	1/1:0,13:13:33.11:527,33,0
chr10	20924021	.	C	CTT	23848.04	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=16.841;DP=699;FS=3.789;HRun=1;HaplotypeScore=132.6319;InbreedingCoeff=0.9992;MQ=69.17;MQ0=0;MQRankSum=-6.545;QD=47.79;ReadPosRankSum=6.645;VQSLOD=4.8266;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,43:44:99:2133,114,0	0/0:9,0:9:21.06:0,21,297	0/0:13,0:13:39.11:0,39,555	0/0:21,0:21:48.09:0,48,679	0/0:28,0:28:72.21:0,72,1052	1/1:1,25:26:72.25:1389,72,0	1/1:1,16:17:42.10:772,42,0	0/0:28,0:28:84.25:0,84,1211	1/1:1,26:27:66.23:1273,66,0	0/0:28,0:28:78.26:0,78,1172	0/0:19,0:19:48.16:0,48,733	1/1:0,30:31:72.25:1383,72,0	1/1:0,16:16:48.16:924,48,0	1/1:1,13:14:39.09:714,39,0	0/0:29,0:29:84.27:0,84,1257	1/1:0,26:25:69.24:1329,69,0	1/1:1,27:28:81.19:1488,81,0	1/1:0,23:23:54.14:1005,54,0	0/0:25,0:25:66.21:0,66,990	1/1:0,27:27:78.16:1390,78,0	1/1:5,28:35:87.12:1446,87,0	1/1:1,28:29:78.18:1430,78,0	1/1:1,17:18:43.66:827,44,0	1/1:1,36:37:84.29:1619,84,0	1/1:2,17:20:39.05:677,39,0	1/1:1,32:33:99:1770,99,0	1/1:1,34:35:90.75:1698,91,0	1/1:0,13:13:30.10:580,30,0
chr10	20925468	.	G	GT	3077.70	PASS	AB=0.964;AC=41;AF=0.732;AN=56;BaseQRankSum=3.240;DP=432;FS=3.815;HRun=8;HaplotypeScore=157.7291;InbreedingCoeff=0.1554;MQ=58.08;MQ0=3;MQRankSum=-1.704;QD=7.97;ReadPosRankSum=0.835;VQSLOD=0.5217;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:19:13.09:100,13,0	0/1:12,0:13:8.17:8,0,55	0/0:23,0:15:39.02:0,39,356	0/1:8,0:8:12.55:13,0,69	1/1:7,22:29:43.49:621,43,0	1/1:14,1:15:7.90:129,8,0	1/1:16,0:16:8.14:130,8,0	0/1:27,0:25:7.63:13,0,8	1/1:11,0:11:15.79:104,16,0	1/1:12,14:25:22.90:450,23,0	1/1:7,14:21:23.10:336,23,0	1/1:11,0:11:19.53:90,20,0	0/1:12,0:12:16.33:50,0,16	0/1:11,0:11:1.85:38,0,2	0/0:17,0:17:48.02:0,48,439	1/1:8,1:9:18.80:101,19,0	1/1:18,1:19:11.67:160,12,0	1/1:11,0:10:10.04:65,10,0	0/1:12,6:18:3.16:244,0,3	1/1:19,0:19:4.25:68,4,0	0/0:6,0:6:0.95:0,1,2	1/1:17,0:16:8.88:74,9,0	0/1:10,0:10:2.98:50,0,3	0/1:5,0:5:21.39:23,0,21	0/1:20,0:20:16.41:110,0,16	1/1:18,0:18:14.48:130,14,0	1/1:11,0:11:11.05:64,11,0	1/1:10,0:10:9.41:64,9,0
chr10	20925475	.	TTG	T	5296.52	PASS	AB=1.000;AC=47;AF=0.839;AN=56;BaseQRankSum=6.704;DP=429;FS=19.819;HRun=0;HaplotypeScore=154.9978;InbreedingCoeff=0.3824;MQ=53.05;MQ0=5;MQRankSum=-4.436;QD=13.69;ReadPosRankSum=1.178;VQSLOD=3.4769;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:19:3.51:179,4,0	0/1:11,0:11:48.84:49,0,83	0/0:23,0:14:42.06:0,42,469	0/1:8,0:7:2.32:2,0,84	1/1:30,0:30:28.07:228,28,0	1/1:17,0:17:32.96:331,33,0	1/1:15,0:15:8.64:239,9,0	1/1:1,21:20:46.37:606,46,0	1/1:12,0:11:32.94:283,33,0	1/1:25,0:23:19.93:192,20,0	1/1:20,0:20:23.86:201,24,0	1/1:10,0:10:23.07:178,23,0	0/1:12,0:12:27.49:113,0,27	1/1:9,1:10:26.51:236,27,0	0/0:19,0:19:54.14:0,54,787	1/1:9,0:9:21.82:176,22,0	1/1:19,0:19:10.97:236,11,0	1/1:11,0:10:21.08:155,21,0	1/1:18,0:18:8.25:187,8,0	1/1:15,0:15:19.78:222,20,0	0/1:6,0:6:5.09:53,0,5	1/1:17,0:16:26.84:282,27,0	0/1:11,0:11:4.96:138,0,5	1/1:5,0:5:10.15:43,10,0	1/1:23,0:23:27.03:295,27,0	1/1:18,0:18:18.34:261,18,0	1/1:10,0:10:22.83:202,23,0	1/1:14,0:11:23.92:208,24,0
chr10	20925476	.	TG	T	5674.60	PASS	AB=0.923;AC=50;AF=0.893;AN=56;BaseQRankSum=6.922;DP=420;FS=13.988;HRun=1;HaplotypeScore=144.8129;InbreedingCoeff=0.6150;MQ=53.05;MQ0=5;MQRankSum=-3.268;QD=14.97;ReadPosRankSum=0.787;VQSLOD=3.5357;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,9:18:16.49:171,16,0	0/1:9,2:11:5.23:84,0,5	0/0:23,0:14:42.07:0,42,475	0/1:8,0:7:8.49:8,0,92	1/1:28,2:30:63.48:435,63,0	1/1:10,7:17:38.41:315,38,0	1/1:10,5:15:23.48:244,23,0	1/1:21,0:19:47.18:311,47,0	1/1:3,9:11:32.91:267,33,0	1/1:23,1:22:47.48:322,47,0	1/1:20,0:20:49.73:361,50,0	1/1:3,6:10:23.80:177,24,0	1/1:8,4:12:8.49:130,8,0	1/1:5,5:10:25.97:198,26,0	0/0:18,0:18:54.15:0,54,683	1/1:2,7:9:21.36:164,21,0	1/1:12,6:18:30.94:284,31,0	1/1:4,7:10:22.14:154,22,0	1/1:18,0:18:40.33:304,40,0	1/1:7,6:13:25.40:190,25,0	1/1:2,4:6:4.65:64,5,0	1/1:8,9:16:35.95:302,36,0	1/1:5,6:11:11.89:159,12,0	1/1:4,1:5:12.53:73,13,0	1/1:11,12:23:42.03:292,42,0	1/1:9,8:17:37.09:277,37,0	1/1:4,5:10:26.69:201,27,0	1/1:8,5:10:23.89:186,24,0
chr10	20925479	.	TTG	T	3780.98	PASS	AB=0.903;AC=41;AF=0.732;AN=56;BaseQRankSum=11.772;DP=421;FS=15.099;HRun=0;HaplotypeScore=154.9545;InbreedingCoeff=0.1533;MQ=49.83;MQ0=5;MQRankSum=-8.512;QD=10.53;ReadPosRankSum=2.516;VQSLOD=2.6984;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,8:18:9.57:212,10,0	0/1:12,0:11:46.40:46,0,99	0/0:20,0:11:30.10:0,30,453	0/1:11,0:7:6.67:7,0,100	0/1:29,0:29:56.29:56,0,437	1/1:13,6:18:32.41:330,32,0	1/1:9,4:13:0.77:181,1,0	0/0:23,0:21:14.41:0,14,177	1/1:5,7:11:32.95:282,33,0	0/1:26,0:24:60:60,0,396	0/1:19,0:19:41.14:41,0,220	1/1:6,3:9:19.31:153,19,0	0/1:9,3:12:31.28:107,0,31	1/1:5,4:9:23.33:181,23,0	0/0:19,0:19:57.19:0,57,988	1/1:2,7:9:21.38:170,21,0	1/1:11,6:17:0.49:165,0,0	1/1:4,7:10:21.85:152,22,0	0/1:19,0:19:18.30:18,0,267	1/1:11,2:13:20.31:221,20,0	0/1:2,3:5:7.62:50,0,8	1/1:7,9:15:18.57:242,19,0	0/1:7,5:12:4.61:155,0,5	1/1:5,0:5:9.58:40,10,0	1/1:14,9:23:24.81:281,25,0	1/1:8,8:16:14:229,14,0	1/1:7,3:10:23.77:198,24,0	1/1:9,4:10:23.91:204,24,0
chr10	20925480	.	TG	T	3576.20	PASS	AB=0.949;AC=42;AF=0.750;AN=56;BaseQRankSum=11.987;DP=413;FS=11.655;HRun=1;HaplotypeScore=147.0337;InbreedingCoeff=0.3974;MQ=46.63;MQ0=5;MQRankSum=-9.053;QD=10.49;ReadPosRankSum=2.325;VQSLOD=0.7422;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,1:19:23.71:215,24,0	0/1:13,0:12:17.24:94,0,17	0/0:20,0:10:30.10:0,30,432	0/0:9,1:6:3.29:0,3,98	0/1:25,2:27:15.23:15,0,295	1/1:18,1:18:36.79:303,37,0	1/1:12,1:13:15.15:176,15,0	0/0:23,0:21:23.35:0,23,329	1/1:12,0:11:32.83:251,33,0	0/1:25,1:24:56.28:56,0,302	0/1:18,0:18:41.33:41,0,166	1/1:7,1:8:20.62:147,21,0	1/1:11,1:12:4.68:117,5,0	1/1:8,1:9:22.38:155,22,0	0/0:19,0:19:57.17:0,57,838	1/1:9,0:9:20.50:150,20,0	1/1:17,0:17:22.02:218,22,0	1/1:10,0:10:20.41:140,20,0	0/1:17,0:17:13.45:13,0,213	1/1:8,4:12:22.22:162,22,0	0/1:3,1:4:0.73:33,0,1	1/1:16,0:15:30.33:246,30,0	1/1:12,0:12:11.02:142,11,0	1/1:5,0:5:12.15:63,12,0	1/1:20,2:22:36.23:258,36,0	1/1:17,0:17:31.70:231,32,0	1/1:8,2:10:23.71:174,24,0	1/1:12,1:10:23.84:176,24,0
chr10	20925481	.	GT	G	741.59	PASS	AB=0.926;AC=36;AF=0.643;AN=56;BaseQRankSum=14.269;DP=407;FS=0.000;HRun=3;HaplotypeScore=156.5052;InbreedingCoeff=0.7672;MQ=45.12;MQ0=5;MQRankSum=-11.553;QD=3.10;ReadPosRankSum=6.274;VQSLOD=-0.1321;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:16,4:19:3.44:43,3,0	0/0:13,0:12:16.27:0,16,228	0/0:20,0:9:27.09:0,27,377	0/0:10,0:6:2.09:0,2,42	0/0:26,0:26:68.59:0,69,706	1/1:15,3:17:21.86:69,22,0	1/1:12,1:13:16.36:57,16,0	0/0:21,0:19:46.20:0,46,560	1/1:11,1:11:18.85:53,19,0	0/0:26,0:24:59.68:0,60,640	0/0:14,0:14:36.96:0,37,352	1/1:8,0:8:6.70:18,7,0	0/1:11,1:12:7.36:28,0,7	1/1:8,1:9:14.95:49,15,0	0/0:20,0:20:60.18:0,60,820	1/1:8,0:8:9.08:24,9,0	1/1:18,1:19:14.91:64,15,0	1/1:7,1:8:11.36:40,11,0	0/0:18,0:18:44:0,44,466	0/1:12,1:13:0.32:10,0,0	1/1:5,0:5:5.64:16,6,0	1/1:15,1:15:12.86:47,13,0	1/1:9,3:12:15.78:72,16,0	1/1:4,1:5:8.53:73,9,0	1/1:17,3:20:27.46:103,27,0	1/1:16,2:18:19.92:93,20,0	1/1:10,0:10:11.98:34,12,0	1/1:8,5:10:16.14:50,16,0
chr10	20925485	.	GT	G	5053.71	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=13.664;DP=411;FS=1.893;HRun=3;HaplotypeScore=133.9570;InbreedingCoeff=0.9368;MQ=41.58;MQ0=26;MQRankSum=-11.547;QD=20.97;ReadPosRankSum=4.950;VQSLOD=4.4713;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,18:18:39.45:398,39,0	0/0:12,0:11:28.81:0,29,377	0/0:22,0:8:21.07:0,21,297	0/0:10,0:5:4.59:0,5,61	0/0:25,0:24:62.98:0,63,792	1/1:1,15:15:36:391,36,0	1/1:4,8:10:16.58:239,17,0	0/0:23,0:22:53.17:0,53,656	1/1:3,9:11:32.12:315,32,0	0/0:28,0:23:59.80:0,60,712	0/0:15,0:14:35.88:0,36,403	1/1:4,4:8:20.28:161,20,0	1/1:6,6:11:8.70:142,9,0	1/1:3,6:9:23.17:185,23,0	0/0:19,0:19:54.17:0,54,752	1/1:0,8:8:20.79:206,21,0	1/1:8,13:17:35:364,35,0	1/1:4,8:9:26.21:270,26,0	0/0:15,0:14:41.87:0,42,488	1/1:2,9:11:12.44:202,12,0	1/1:0,5:5:6.80:78,7,0	1/1:4,13:14:36.10:401,36,0	1/1:2,10:12:25.78:276,26,0	1/1:1,4:5:9.37:60,9,0	1/1:2,17:19:42.76:442,43,0	1/1:3,17:18:42.32:442,42,0	1/1:3,6:9:21.77:196,22,0	1/1:2,11:10:24.07:286,24,0
chr10	20925490	.	TTTG	T	5902.17	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=13.535;DP=440;FS=4.625;HRun=0;HaplotypeScore=140.3260;InbreedingCoeff=0.9622;MQ=38.11;MQ0=43;MQRankSum=-12.053;QD=22.02;ReadPosRankSum=3.941;VQSLOD=4.5823;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:16,4:17:39.63:336,40,0	0/0:11,0:10:29.31:0,29,564	0/0:22,0:7:12.04:0,12,243	0/0:16,0:5:8.91:0,9,66	0/0:25,0:23:58.65:0,59,972	1/1:13,3:14:36.04:427,36,0	1/1:14,1:12:19.92:305,20,0	0/0:25,0:23:63.20:0,63,790	1/1:11,3:11:33.10:438,33,0	0/0:23,0:18:41.50:0,42,678	0/0:14,0:13:37.41:0,37,530	1/1:11,1:12:25.59:241,26,0	1/1:9,1:9:16.49:183,16,0	1/1:11,1:11:24.02:285,24,0	0/0:20,0:18:54.18:0,54,1060	1/1:9,0:8:21.02:259,21,0	1/1:22,1:16:38.49:402,38,0	1/1:13,1:11:15.22:293,15,0	0/0:16,0:15:43.95:0,44,596	1/1:11,1:12:18.02:228,18,0	1/1:7,0:7:9.46:89,9,0	1/1:18,0:15:40.53:413,41,0	1/1:9,3:12:26.32:304,26,0	1/1:4,1:5:10.26:96,10,0	1/1:17,3:19:42.09:541,42,0	1/1:21,2:18:40.94:462,41,0	1/1:12,1:11:26.88:306,27,0	1/1:8,5:10:24.06:294,24,0
chr10	20926253	.	G	GGAT	22849.92	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=3.614;DP=627;FS=5.912;HRun=0;HaplotypeScore=95.0521;InbreedingCoeff=0.9996;MQ=56.93;MQ0=2;MQRankSum=-1.692;QD=53.39;ReadPosRankSum=7.754;VQSLOD=6.9097;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,43:46:99:2659,120,0	0/0:10,0:10:27.09:0,27,436	0/0:29,0:24:65.80:0,66,979	0/0:27,0:25:57.18:0,57,870	0/0:20,0:20:51.12:0,51,780	1/1:1,16:17:45.15:1004,45,0	1/1:3,29:33:66.23:1471,66,0	0/0:28,0:28:78.25:0,78,1247	1/1:4,21:25:54.19:1195,54,0	0/0:20,0:20:57.19:0,57,930	0/0:15,0:15:45.07:0,45,664	1/1:1,21:23:57.13:1270,57,0	1/1:0,14:14:36.12:804,36,0	1/1:4,21:27:51.17:1134,51,0	0/0:22,0:22:54.06:0,54,857	1/1:1,21:22:63.22:1405,63,0	1/1:4,24:29:72.25:1567,72,0	1/1:2,26:29:69.24:1508,69,0	0/0:28,0:28:66.23:0,66,1074	1/1:0,17:17:45.15:1003,45,0	1/1:3,35:38:87.30:1942,87,0	1/1:0,10:11:30.10:665,30,0	1/1:1,12:13:36.12:796,36,0	1/1:4,22:28:56.79:1251,57,0	1/1:2,10:12:30.10:663,30,0	1/1:3,14:17:39.13:840,39,0	1/1:1,13:14:36.12:803,36,0	1/1:0,13:13:39.13:869,39,0
chr10	20926485	.	G	GTACT	14101.23	PASS	AB=0.667;AC=37;AF=0.661;AN=56;BaseQRankSum=10.337;DP=416;FS=10.321;HRun=0;HaplotypeScore=92.7365;InbreedingCoeff=0.8676;MQ=44.48;MQ0=11;MQRankSum=-8.525;QD=53.62;ReadPosRankSum=1.971;VQSLOD=5.7271;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,11:20:45.10:970,45,0	0/0:8,0:8:21.07:0,21,382	0/0:21,0:4:12.04:0,12,217	0/0:15,0:3:9.03:0,9,162	0/0:17,0:17:51.14:0,51,866	1/1:10,17:27:69.19:1629,69,0	1/1:5,8:13:24.08:626,24,0	0/0:32,0:30:78.27:0,78,1419	1/1:3,8:11:24.08:627,24,0	0/0:20,0:20:60.21:0,60,1075	0/0:12,0:12:36.12:0,36,655	1/1:2,10:13:36.09:880,36,0	1/1:1,5:6:18.04:416,18,0	1/1:6,10:16:33.07:804,33,0	0/0:13,0:13:30.09:0,30,499	1/1:2,11:13:36.08:841,36,0	1/1:6,14:19:45.11:1093,45,0	1/1:6,9:15:30.10:744,30,0	0/0:15,0:13:36.09:0,36,617	1/1:4,12:16:39.03:848,39,0	1/1:3,2:5:3.01:78,3,0	1/1:1,4:5:9.50:236,10,0	1/1:3,9:12:21.07:549,21,0	1/1:7,9:16:23.79:543,24,0	1/1:5,16:21:57.15:1386,57,0	0/1:7,7:14:21.46:735,0,21	1/1:2,4:5:15.05:390,15,0	1/1:5,9:14:27.09:706,27,0
chr10	20926513	.	TA	T	3799.43	PASS	AB=0.849;AC=39;AF=0.696;AN=56;BaseQRankSum=11.517;DP=433;FS=4.134;HRun=13;HaplotypeScore=105.0133;InbreedingCoeff=0.7112;MQ=55.67;MQ0=2;MQRankSum=-6.948;QD=13.33;ReadPosRankSum=3.841;VQSLOD=3.7251;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,16:21:44.73:328,45,0	0/0:7,0:8:14.95:0,15,126	0/1:8,2:7:13.10:13,0,33	0/1:8,0:7:6.69:7,0,79	0/0:17,4:22:18.22:0,18,312	1/1:3,21:24:59.61:438,60,0	1/1:2,8:12:24.95:165,25,0	0/0:38,1:38:41.15:0,41,546	1/1:4,5:8:14.91:109,15,0	0/0:20,0:20:39.05:0,39,374	0/0:17,1:18:17.09:0,17,314	1/1:4,11:15:29.05:218,29,0	1/1:2,8:10:23.85:175,24,0	1/1:6,6:13:19.87:137,20,0	0/0:14,1:15:8.13:0,8,237	1/1:3,7:11:22.89:159,23,0	1/1:6,15:20:12.58:255,13,0	1/1:2,12:14:26.83:197,27,0	0/0:26,0:25:52.30:0,52,486	1/1:4,12:16:32.78:241,33,0	1/1:1,5:6:14.91:109,15,0	1/1:1,2:3:5.96:44,6,0	0/1:6,4:10:14.27:73,0,14	1/1:2,13:16:8.69:217,9,0	1/1:4,13:19:21.66:253,22,0	1/1:4,20:24:50.63:372,51,0	1/1:4,4:8:11.40:86,11,0	1/1:5,9:15:28.85:203,29,0
chr10	20926799	.	A	AC	24168.50	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-3.185;DP=723;FS=0.739;HRun=0;HaplotypeScore=83.6126;InbreedingCoeff=0.9965;MQ=80.07;MQ0=0;MQRankSum=-5.317;QD=41.60;ReadPosRankSum=6.914;VQSLOD=4.6783;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,41:41:99:1774,111,0	0/0:5,0:5:15.05:0,15,209	0/0:22,0:23:35.08:0,35,837	0/0:18,0:18:40.82:0,41,526	0/0:13,0:13:39.12:0,39,530	1/1:1,26:27:72.25:1151,72,0	1/1:0,34:34:87.30:1390,87,0	1/1:0,18:18:51.14:767,51,0	1/1:0,27:27:66.23:1055,66,0	0/0:25,0:25:66.21:0,66,909	0/0:8,0:8:24.08:0,24,335	1/1:1,24:25:69.24:1102,69,0	1/1:0,29:29:75.26:1198,75,0	1/1:0,37:37:99:1726,108,0	0/0:24,0:24:72.24:0,72,1007	1/1:2,14:16:39.13:623,39,0	1/1:0,31:31:90.31:1438,90,0	1/1:1,36:37:99:1630,102,0	0/0:26,0:26:66.21:0,66,906	1/1:1,17:18:45.07:687,45,0	1/1:1,79:81:99:3068,193,0	1/1:1,9:10:24.08:383,24,0	1/1:1,14:15:39.13:623,39,0	1/1:0,49:49:99:1966,123,0	1/1:0,22:22:60.20:939,60,0	1/1:1,26:27:75.24:1163,75,0	1/1:1,24:24:60.06:958,60,0	1/1:0,12:12:33.11:527,33,0
chr10	20927589	.	G	GT	16829.61	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=17.631;DP=655;FS=5.300;HRun=2;HaplotypeScore=162.9593;InbreedingCoeff=0.9990;MQ=79.33;MQ0=0;MQRankSum=-7.531;QD=37.07;ReadPosRankSum=5.972;VQSLOD=3.7132;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,36:39:96.32:1352,96,0	0/0:14,0:14:42.13:0,42,568	0/0:24,0:24:65.03:0,65,830	0/0:16,0:16:48.01:0,48,600	0/0:32,0:32:96.32:0,96,1339	1/1:0,25:25:75.25:1045,75,0	1/1:1,22:23:60.20:845,60,0	0/0:27,0:27:78.24:0,78,1061	1/1:1,18:19:54.18:764,54,0	0/0:32,0:32:96.32:0,96,1338	0/0:20,0:20:57.18:0,57,771	1/1:1,13:14:37.41:543,37,0	1/1:5,19:24:61.43:841,61,0	1/1:1,10:11:26.01:379,26,0	0/0:20,0:20:57.19:0,57,797	1/1:2,20:22:52.05:754,52,0	1/1:1,31:32:87.29:1233,87,0	1/1:0,28:28:75.25:1055,75,0	0/0:16,0:16:45.15:0,45,628	1/1:0,26:26:69.23:959,69,0	1/1:1,26:27:72.24:995,72,0	1/1:0,27:27:78.25:1068,78,0	1/1:0,25:25:63.21:882,63,0	1/1:0,27:27:78.26:1102,78,0	1/1:0,26:26:78.26:1084,78,0	1/1:4,31:35:54.61:1258,55,0	1/1:0,11:11:21.07:298,21,0	1/1:0,13:13:28.96:373,29,0
chr10	20927763	.	A	ACTTCT	31743.60	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-1.099;DP=602;FS=0.685;HRun=0;HaplotypeScore=113.4265;InbreedingCoeff=0.9981;MQ=77.49;MQ0=0;MQRankSum=-15.642;QD=76.86;ReadPosRankSum=2.779;VQSLOD=6.9534;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,25:33:90.31:2634,90,0	0/0:7,0:7:21.07:0,21,456	0/0:26,0:26:78.27:0,78,1698	0/0:25,0:24:66.12:0,66,1378	0/0:23,0:23:66.23:0,66,1470	1/1:2,8:11:24.08:717,24,0	1/1:6,20:29:72.25:2275,72,0	0/0:19,0:19:54.19:0,54,1203	1/1:2,18:21:54.18:1683,54,0	0/0:23,0:24:69.24:0,69,1533	0/0:18,0:18:51.18:0,51,1126	1/1:1,21:24:63.22:2021,63,0	1/1:8,21:30:84.21:2529,84,0	1/1:6,17:24:63.22:1982,63,0	0/0:23,0:23:63.22:0,63,1404	1/1:3,12:16:39.13:1158,39,0	1/1:4,22:26:66.18:1959,66,0	1/1:2,11:18:39.13:1244,39,0	0/0:24,0:24:69.24:0,69,1489	1/1:4,9:16:42.10:1168,42,0	1/1:3,9:15:21.07:678,21,0	1/1:2,13:18:42.14:1310,42,0	1/1:2,13:16:45.15:1336,45,0	1/1:3,18:24:51.18:1541,51,0	1/1:1,16:18:51.18:1643,51,0	1/1:7,32:40:99:3660,120,0	1/1:4,13:21:51.09:1432,51,0	1/1:3,9:12:24.08:775,24,0
chr10	20930141	.	TACACAC	T	31.77	PASS	AC=2;AF=0.167;AN=12;BaseQRankSum=1.552;DP=191;FS=9.590;HRun=0;HaplotypeScore=24.9601;MQ=19.99;MQ0=104;MQRankSum=-1.187;QD=3.53;ReadPosRankSum=-1.369;VQSLOD=-0.6633;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	./.	./.	0/0:13,1:7:0:0,0,0	0/0:23,0:9:3.01:0,3,56	./.	0/0:4,0:7:21.07:0,21,428	./.	0/0:9,5:6:2.97:0,3,22	./.	./.	./.	./.	./.	./.	0/0:8,0:7:9.03:0,9,198	./.	./.	./.	./.	1/1:7,1:6:6.02:103,6,0	./.	./.	./.	./.
chr10	20930947	.	TAC	T	871.30	PASS	AB=0.714;AC=31;AF=0.861;AN=36;BaseQRankSum=2.304;DP=229;FS=2.635;HRun=0;HaplotypeScore=34.0207;InbreedingCoeff=0.2444;MQ=24.89;MQ0=129;MQRankSum=0.680;QD=5.85;ReadPosRankSum=-0.793;VQSLOD=2.4097;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,12:11:2.95:33,3,0	./.	./.	./.	./.	1/1:10,1:6:5.68:28,6,0	1/1:6,9:10:18:179,18,0	./.	./.	0/0:2,0:1:3.01:0,3,45	./.	1/1:4,2:2:3.01:33,3,0	./.	1/1:0,1:2:5.85:47,6,0	0/0:12,0:4:2.58:0,3,44	1/1:1,0:6:15.12:73,15,0	1/1:10,0:10:14.20:70,14,0	1/1:4,0:5:11.36:56,11,0	./.	1/1:1,0:1:2.84:14,3,0	1/1:8,0:10:25.57:126,26,0	1/1:5,2:5:5.85:47,6,0	./.	1/1:6,7:11:14.87:145,15,0	0/1:3,2:3:35.61:56,0,36	1/1:6,1:1:2.84:14,3,0	1/1:2,0:4:8.52:42,9,0	1/1:3,1:2:2.84:14,3,0
chr10	20932015	.	GCT	G	18901.10	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=17.661;DP=613;FS=1.012;HRun=0;HaplotypeScore=156.9341;InbreedingCoeff=0.9968;MQ=83.55;MQ0=0;MQRankSum=-8.753;QD=44.90;ReadPosRankSum=4.323;VQSLOD=5.4250;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,39:38:99:1554,99,0	0/0:15,0:15:45.15:0,45,902	0/0:25,0:25:72.23:0,72,1350	0/0:19,0:19:51.51:0,52,827	0/0:30,0:30:90.26:0,90,1704	1/1:1,24:25:66.22:1059,66,0	1/1:0,13:13:39.13:635,39,0	1/1:0,18:18:51.12:755,51,0	1/1:1,16:17:51.17:831,51,0	0/0:35,0:35:99:0,105,2001	0/0:16,0:16:48.16:0,48,975	1/1:1,17:18:54.18:876,54,0	1/1:0,14:14:42.14:683,42,0	1/1:2,14:16:48.14:753,48,0	0/0:34,0:34:99:0,102,2020	1/1:0,27:27:69.24:1123,69,0	1/1:2,17:19:54.16:832,54,0	1/1:1,17:18:51.12:802,51,0	0/0:18,0:18:54.17:0,54,1009	1/1:0,19:19:57.16:900,57,0	1/1:0,18:18:51.13:802,51,0	1/1:0,18:18:51.13:798,51,0	1/1:1,22:23:66.16:1029,66,0	1/1:0,32:32:96.33:1565,96,0	1/1:2,15:17:51.17:825,51,0	1/1:5,20:25:14.27:1067,14,0	1/1:5,25:30:90.23:1357,90,0	1/1:1,14:15:42.10:656,42,0
chr10	20932105	.	C	CTG	27070.43	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-10.908;DP=718;FS=0.994;HRun=0;HaplotypeScore=84.8341;InbreedingCoeff=0.9999;MQ=90.21;MQ0=1;MQRankSum=-8.775;QD=51.46;ReadPosRankSum=6.162;VQSLOD=5.5604;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,46:50:99:2449,132,0	0/0:12,0:12:36.10:0,36,510	0/0:35,0:35:90.29:0,90,1297	0/0:22,0:22:63.16:0,63,888	0/0:19,0:19:57.19:0,57,839	1/1:3,18:21:60.21:1114,60,0	1/1:0,22:22:60.21:1124,60,0	1/1:1,28:30:87.25:1515,87,0	1/1:2,27:28:78.27:1457,78,0	0/0:23,0:23:69.23:0,69,1000	0/0:13,0:13:36.12:0,36,530	1/1:3,20:23:66.23:1231,66,0	1/1:6,25:31:84.29:1547,84,0	1/1:1,24:25:75.26:1391,75,0	0/0:37,0:37:99:0,105,1543	1/1:2,25:27:75.26:1405,75,0	1/1:1,33:34:93.32:1741,93,0	1/1:1,22:23:66.18:1200,66,0	0/0:31,0:31:93.31:0,93,1370	1/1:1,13:14:39.13:716,39,0	1/1:1,28:29:72.25:1348,72,0	1/1:4,16:20:51.17:949,51,0	1/1:3,15:18:51.17:941,51,0	1/1:2,30:32:93.32:1741,93,0	1/1:1,26:28:81.27:1478,81,0	1/1:1,27:28:81.28:1518,81,0	1/1:2,24:26:75.26:1402,75,0	1/1:2,14:16:45.11:806,45,0
chr10	20932551	.	TGCCGAG	T	18257.71	PASS	AB=0.537;AC=37;AF=0.661;AN=56;BaseQRankSum=14.002;DP=490;FS=2.675;HRun=0;HaplotypeScore=115.3928;InbreedingCoeff=0.9147;MQ=72.23;MQ0=0;MQRankSum=-16.362;QD=54.66;ReadPosRankSum=5.998;VQSLOD=5.0182;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,29:30:66.23:1535,66,0	0/0:11,0:11:33.11:0,33,1143	0/0:15,0:15:42.14:0,42,1387	0/0:12,0:12:33.11:0,33,996	0/0:17,0:17:45.05:0,45,1533	1/1:3,18:21:48.16:1153,48,0	1/1:2,11:13:33.11:785,33,0	0/0:28,0:28:84.29:0,84,2805	1/1:2,24:26:60.21:1441,60,0	0/0:14,0:14:42.14:0,42,1458	0/0:15,0:15:45.14:0,45,1537	1/1:1,14:15:36.12:865,36,0	1/1:1,16:17:39.13:937,39,0	1/1:0,18:18:39.13:937,39,0	0/0:23,0:23:69.24:0,69,2408	1/1:3,18:21:51.18:1225,51,0	1/1:1,17:18:39.13:930,39,0	1/1:2,13:15:36.59:866,37,0	0/0:21,0:21:63.21:0,63,2131	1/1:0,18:18:48.16:1153,48,0	1/1:3,7:10:12.04:288,12,0	1/1:2,21:23:54.19:1272,54,0	1/1:1,12:13:33.11:767,33,0	1/1:2,13:15:27.09:616,27,0	1/1:0,13:13:30.10:671,30,0	0/1:3,19:22:54.01:1172,0,54	1/1:1,17:18:48.16:1140,48,0	1/1:0,8:8:21.07:505,21,0
chr10	20932974	.	G	GC	11913.66	PASS	AB=1.000;AC=41;AF=0.732;AN=56;BaseQRankSum=2.895;DP=531;FS=19.851;HRun=7;HaplotypeScore=78.9448;InbreedingCoeff=0.8932;MQ=75.16;MQ0=0;MQRankSum=-2.555;QD=28.16;ReadPosRankSum=3.624;VQSLOD=3.3685;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:9,32:40:81.25:977,81,0	0/1:7,0:7:12.87:13,0,99	0/0:13,0:13:30.02:0,30,281	0/0:11,0:11:18.82:0,19,158	0/0:11,0:11:33.05:0,33,318	1/1:0,12:12:36.11:435,36,0	1/1:1,32:33:90.28:1087,90,0	1/1:5,13:18:10.09:375,10,0	1/1:1,19:20:54.17:652,54,0	0/0:17,0:17:48.06:0,48,457	0/0:13,0:13:36.06:0,36,347	1/1:3,22:25:66.20:796,66,0	1/1:1,11:12:36.10:422,36,0	1/1:5,10:15:30.09:362,30,0	0/0:23,0:23:51.04:0,51,481	1/1:1,9:10:24.07:290,24,0	1/1:5,40:45:99:1268,105,0	1/1:1,28:29:78.24:942,78,0	0/0:20,0:20:51.01:0,51,476	1/1:1,12:13:27.04:309,27,0	1/1:6,24:30:75.22:894,75,0	1/1:1,11:12:27.07:314,27,0	1/1:1,4:5:12.04:145,12,0	1/1:4,40:44:99:1341,111,0	1/1:5,8:13:21.06:253,21,0	1/1:3,10:13:30.02:344,30,0	1/1:2,13:15:13.21:441,13,0	1/1:4,7:11:21.06:253,21,0
chr10	20934269	.	T	TA	7562.11	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-9.858;DP=382;FS=3.866;HRun=8;HaplotypeScore=34.5179;InbreedingCoeff=0.9429;MQ=80.76;MQ0=1;MQRankSum=-3.373;QD=26.53;ReadPosRankSum=2.666;VQSLOD=5.1680;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,22:28:57.17:658,57,0	0/0:3,0:3:8.98:0,9,76	0/0:17,0:16:29.82:0,30,254	0/0:14,0:12:9.87:0,10,189	0/0:13,0:13:35.97:0,36,315	1/1:0,16:16:39.05:433,39,0	1/1:1,15:16:36.11:415,36,0	1/1:3,11:14:33.06:357,33,0	1/1:1,8:9:24.07:277,24,0	0/0:10,0:10:30.02:0,30,275	0/0:14,0:14:36.01:0,36,326	1/1:2,18:20:45.13:519,45,0	1/1:1,13:14:27.08:312,27,0	1/1:2,12:14:27.08:312,27,0	0/0:13,0:13:27:0,27,247	1/1:0,16:16:42.12:485,42,0	1/1:1,15:16:45.13:519,45,0	1/1:2,14:16:33.10:381,33,0	0/0:12,0:12:30.01:0,30,274	1/1:0,4:4:6.02:69,6,0	1/1:2,18:20:45.13:519,45,0	1/1:0,5:5:15.04:173,15,0	1/1:1,10:11:27.08:311,27,0	1/1:1,15:16:36.11:415,36,0	1/1:0,10:10:24.07:277,24,0	1/1:4,18:22:32.65:590,33,0	1/1:1,14:14:42.07:469,42,0	1/1:1,2:3:6.02:69,6,0
chr10	20934694	.	A	AC	26454.22	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-12.071;DP=729;FS=5.668;HRun=3;HaplotypeScore=67.0923;InbreedingCoeff=0.9985;MQ=85.56;MQ0=0;MQRankSum=-10.829;QD=40.82;ReadPosRankSum=5.249;VQSLOD=4.2576;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,40:40:99:1663,111,0	1/1:0,7:7:21.07:315,21,0	0/0:23,0:23:43.76:0,44,799	0/0:34,0:32:52.21:0,52,1057	1/1:1,35:36:99:1457,99,0	1/1:1,23:24:63.21:944,63,0	1/1:3,18:21:51.17:764,51,0	1/1:4,47:51:99:2025,138,0	1/1:0,26:26:72.24:1079,72,0	1/1:0,29:29:87.28:1283,87,0	1/1:0,21:21:54.18:809,54,0	1/1:0,16:16:39.13:585,39,0	1/1:0,29:29:81.27:1213,81,0	1/1:0,28:28:72.24:1079,72,0	0/0:24,0:24:72.23:0,72,934	1/1:1,27:28:72.24:1079,72,0	1/1:2,28:30:84.28:1258,84,0	1/1:0,18:18:51.17:764,51,0	1/1:0,21:21:60.16:874,60,0	1/1:0,30:30:84.28:1257,84,0	1/1:1,19:20:57.19:854,57,0	1/1:0,25:25:66.22:987,66,0	1/1:1,25:26:72.24:1079,72,0	1/1:0,18:18:45.15:675,45,0	1/1:0,24:24:72.24:1079,72,0	1/1:1,29:30:87.26:1262,87,0	1/1:1,36:37:99:1529,102,0	1/1:0,13:13:36.12:539,36,0
chr10	20936010	.	C	CTT	32094.37	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-10.552;DP=722;FS=2.165;HRun=1;HaplotypeScore=80.0178;InbreedingCoeff=0.9996;MQ=85.40;MQ0=5;MQRankSum=-7.605;QD=49.68;ReadPosRankSum=4.611;VQSLOD=4.9648;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,40:42:99:2072,112,0	1/1:1,16:17:45.08:794,45,0	0/0:24,0:24:66.22:0,66,1010	0/0:30,0:30:72.17:0,72,1042	1/1:5,22:28:63.57:1067,64,0	1/1:1,16:17:51.17:969,51,0	1/1:4,28:32:78.27:1507,78,0	1/1:1,30:32:96.28:1730,96,0	1/1:0,26:27:75.26:1449,75,0	1/1:4,26:31:87.24:1558,87,0	1/1:2,12:14:36.12:696,36,0	1/1:1,23:25:69.20:1296,69,0	1/1:2,18:20:57.13:1026,57,0	1/1:0,25:24:63.22:1217,63,0	0/0:22,0:22:66.22:0,66,1011	1/1:2,25:27:69.21:1297,69,0	1/1:1,48:49:99:2550,132,0	1/1:0,25:25:66.23:1275,66,0	1/1:0,16:16:48.16:897,48,0	1/1:0,11:11:33.11:620,33,0	1/1:3,45:48:99:2283,121,0	1/1:0,10:11:30.06:542,30,0	1/1:1,14:14:36.08:658,36,0	1/1:0,30:30:78.27:1508,78,0	1/1:1,17:17:45.11:831,45,0	1/1:1,25:26:75.26:1449,75,0	1/1:1,35:36:96.29:1817,96,0	1/1:2,20:22:51.17:985,51,0
chr10	20937077	.	AC	A	14188.30	PASS	AB=0.968;AC=41;AF=0.732;AN=56;BaseQRankSum=12.346;DP=554;FS=33.714;HRun=1;HaplotypeScore=83.2291;InbreedingCoeff=0.9049;MQ=51.73;MQ0=11;MQRankSum=-6.987;QD=34.52;ReadPosRankSum=-0.624;VQSLOD=2.5261;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,23:25:69.14:890,69,0	0/0:10,0:10:30.10:0,30,479	0/1:29,1:11:21.40:21,0,345	0/0:35,1:16:27.41:0,27,453	0/0:25,0:25:75.24:0,75,1165	1/1:3,13:16:48.16:653,48,0	1/1:1,5:6:18.06:250,18,0	1/1:4,25:29:84.18:1102,84,0	1/1:2,12:14:42.13:569,42,0	0/0:20,0:20:60.20:0,60,937	0/0:15,0:15:39.13:0,39,616	1/1:0,11:11:30.10:417,30,0	1/1:4,15:19:57.19:786,57,0	1/1:2,11:13:36.12:494,36,0	0/0:13,0:13:39.10:0,39,560	1/1:1,20:21:63.21:871,63,0	1/1:9,21:29:81.16:1042,81,0	1/1:9,14:22:57.14:748,57,0	0/0:24,0:24:72.22:0,72,1085	1/1:4,11:15:42.07:517,42,0	1/1:7,6:13:22.80:285,23,0	1/1:3,10:13:39.12:522,39,0	1/1:3,25:28:84.28:1164,84,0	1/1:3,11:14:39.13:527,39,0	1/1:4,13:17:45.14:605,45,0	1/1:8,14:21:15.22:741,15,0	1/1:5,18:22:66.19:867,66,0	1/1:7,22:29:82.51:1117,83,0
chr10	20937096	.	CA	C	8549.58	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=11.697;DP=549;FS=11.799;HRun=6;HaplotypeScore=95.2227;InbreedingCoeff=0.9833;MQ=61.43;MQ0=9;MQRankSum=-8.827;QD=22.80;ReadPosRankSum=2.163;VQSLOD=3.5435;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,21:23:62.73:581,63,0	0/0:13,0:13:33.11:0,33,434	0/0:34,0:21:46.01:0,46,483	0/0:29,0:12:14.77:0,15,217	0/0:27,0:27:69.21:0,69,888	1/1:8,11:19:39.08:406,39,0	1/1:1,8:9:15.03:160,15,0	1/1:9,32:41:99:1039,102,0	1/1:1,14:15:36.04:371,36,0	0/0:19,0:19:54.16:0,54,687	0/0:15,0:15:42.12:0,42,537	1/1:1,11:12:30.03:308,30,0	1/1:1,14:15:45.06:463,45,0	1/1:5,4:9:18.03:180,18,0	0/0:15,0:15:36.12:0,36,473	1/1:5,14:19:48.09:500,48,0	1/1:15,13:28:45.08:468,45,0	1/1:10,8:18:26.80:281,27,0	0/0:21,0:21:63.20:0,63,827	1/1:1,16:17:42.10:445,42,0	1/1:9,2:11:15.02:154,15,0	1/1:5,4:9:13.78:209,14,0	1/1:4,23:27:60.14:639,60,0	1/1:8,5:13:24.04:239,24,0	1/1:8,11:19:36.08:380,36,0	1/1:12,9:20:14.57:458,15,0	1/1:7,14:20:45.10:477,45,0	1/1:4,25:29:75.15:790,75,0
chr10	20937097	.	A	AAAAC	6574.01	PASS	AB=0.854;AC=38;AF=0.679;AN=56;BaseQRankSum=9.766;DP=566;FS=13.204;HRun=0;HaplotypeScore=132.5395;InbreedingCoeff=0.7324;MQ=63.25;MQ0=9;MQRankSum=-9.544;QD=15.73;ReadPosRankSum=4.580;VQSLOD=3.9357;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:25:28.62:418,29,0	0/0:13,0:13:36.11:0,36,618	0/0:35,0:21:52.19:0,52,611	0/1:30,0:13:6.81:7,0,219	0/0:27,0:27:69.22:0,69,1220	1/1:12,8:21:32.10:236,32,0	0/1:10,0:10:4.97:137,0,5	1/1:41,0:41:74.77:1208,75,0	1/1:15,0:15:25.87:322,26,0	0/0:20,0:20:54.18:0,54,961	0/0:15,0:15:42.14:0,42,708	1/1:12,0:12:21.87:247,22,0	1/1:14,1:15:34.22:333,34,0	1/1:7,3:10:12.96:107,13,0	0/0:15,0:15:42.13:0,42,682	1/1:15,4:20:36.17:188,36,0	1/1:16,12:29:16.08:200,16,0	1/1:9,9:18:23.48:213,23,0	0/0:23,0:23:66.22:0,66,1091	1/1:17,0:17:38.30:417,38,0	1/1:3,8:11:15.02:196,15,0	0/1:5,4:9:0.61:165,0,1	1/1:27,0:27:37.04:503,37,0	1/1:8,5:13:20.04:275,20,0	1/1:13,6:19:29.73:191,30,0	0/1:13,8:20:15.90:452,0,16	1/1:16,9:25:36.84:212,37,0	1/1:29,0:29:60.80:546,61,0
chr10	20938195	.	TTG	T	2356.87	PASS	AB=0.740;AC=48;AF=0.857;AN=56;BaseQRankSum=2.737;DP=254;FS=5.690;HRun=0;HaplotypeScore=34.7701;InbreedingCoeff=0.0922;MQ=70.97;MQ0=8;MQRankSum=1.118;QD=10.52;ReadPosRankSum=0.437;VQSLOD=2.0982;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,0:9:8.98:78,9,0	1/1:3,0:3:3.01:34,3,0	0/0:13,0:7:5.99:0,6,59	0/0:17,0:11:5.22:0,5,32	1/1:4,9:13:17.91:159,18,0	1/1:6,1:8:8.86:81,9,0	1/1:4,3:7:3.01:34,3,0	1/1:19,0:19:2.22:7,2,0	1/1:2,2:4:6.02:67,6,0	1/1:8,2:10:2.51:33,3,0	0/1:3,5:8:33.50:88,0,34	1/1:2,3:5:6.02:67,6,0	1/1:2,1:3:3.01:34,3,0	1/1:0,3:3:9.03:101,9,0	0/1:2,1:3:27.48:27,0,39	1/1:3,1:3:3:25,3,0	0/1:17,7:24:6.58:312,0,7	0/1:18,5:22:30.55:265,0,31	1/1:16,2:18:17.82:165,18,0	1/1:2,5:7:15:154,15,0	1/1:1,4:5:3.01:33,3,0	1/1:2,1:3:3.01:34,3,0	1/1:1,1:2:3.01:34,3,0	1/1:5,3:8:6.01:67,6,0	1/1:9,3:12:15.04:166,15,0	1/1:5,3:7:12.03:134,12,0	1/1:3,3:6:18.04:193,18,0	1/1:5,4:8:9.03:101,9,0
chr10	20938295	.	A	AT	5749.39	PASS	AB=1.000;AC=41;AF=0.732;AN=56;BaseQRankSum=-2.785;DP=255;FS=13.019;HRun=3;HaplotypeScore=42.2021;InbreedingCoeff=0.7213;MQ=70.47;MQ0=0;MQRankSum=-1.814;QD=28.75;ReadPosRankSum=0.598;VQSLOD=2.8742;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,9:11:23.62:308,24,0	0/0:1,0:1:2.88:0,3,15	0/0:11,0:8:21.06:0,21,251	0/1:17,0:10:13.19:13,0,60	0/0:9,0:9:23:0,23,120	1/1:0,12:12:26.96:349,27,0	1/1:0,3:3:9.03:109,9,0	1/1:7,25:32:76.16:938,76,0	1/1:0,1:1:3.01:38,3,0	0/0:7,0:7:19.71:0,20,94	0/0:5,0:5:14.20:0,14,70	1/1:0,4:4:12.04:153,12,0	1/1:0,4:4:9.03:115,9,0	1/1:0,6:6:15.05:192,15,0	0/0:10,0:10:24.07:0,24,287	1/1:0,5:5:15.05:192,15,0	1/1:3,21:24:58.54:737,59,0	1/1:3,15:18:45.62:578,46,0	0/0:12,0:12:25.30:0,25,120	1/1:3,12:15:27.09:340,27,0	1/1:0,2:2:3.01:39,3,0	1/1:1,1:2:3.01:38,3,0	1/1:0,1:1:3.01:38,3,0	1/1:0,2:2:6.02:75,6,0	1/1:1,11:12:33.11:422,33,0	1/1:1,9:10:27.09:343,27,0	1/1:0,9:9:27.09:348,27,0	1/1:0,10:10:30.10:384,30,0
chr10	20938719	.	G	GTTTT	17327.29	PASS	AB=0.652;AC=39;AF=0.696;AN=56;BaseQRankSum=11.183;DP=537;FS=7.031;HRun=8;HaplotypeScore=147.6041;InbreedingCoeff=0.9141;MQ=72.92;MQ0=1;MQRankSum=-12.520;QD=45.72;ReadPosRankSum=-3.882;VQSLOD=1.9359;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:18,16:33:80.14:1572,80,0	0/0:11,0:11:27.06:0,27,409	0/0:23,0:23:24.31:0,24,438	0/0:17,0:15:23.99:0,24,337	0/0:24,0:24:60.16:0,60,888	1/1:17,4:20:45.05:751,45,0	1/1:4,6:10:24.03:486,24,0	1/1:10,0:31:81.08:947,81,0	1/1:8,8:17:35.86:762,36,0	0/0:23,0:23:63.18:0,63,937	0/0:21,0:21:59.38:0,59,847	1/1:15,8:24:60.11:1119,60,0	1/1:11,9:20:45.14:965,45,0	1/1:9,4:13:24.06:478,24,0	0/0:17,0:17:45.10:0,45,618	1/1:9,5:15:36.08:670,36,0	1/1:8,9:18:45.11:953,45,0	1/1:5,6:11:27.09:594,27,0	0/0:20,0:19:48.14:0,48,710	1/1:14,10:28:78.14:1391,78,0	1/1:7,5:13:33.10:638,33,0	1/1:9,6:16:41.91:733,42,0	1/1:8,6:14:39.08:760,39,0	1/1:5,5:11:12.65:271,13,0	1/1:12,10:22:63.19:1276,63,0	1/1:13,9:23:54.13:1045,54,0	1/1:9,12:21:63.21:1292,63,0	0/1:7,7:15:12.29:626,0,12
chr10	20938738	.	TC	T	10119.86	PASS	AB=0.783;AC=38;AF=0.679;AN=56;BaseQRankSum=10.889;DP=467;FS=7.323;HRun=1;HaplotypeScore=101.3939;InbreedingCoeff=0.8605;MQ=66.33;MQ0=0;MQRankSum=-10.197;QD=30.95;ReadPosRankSum=-1.693;VQSLOD=3.6056;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,23:28:78.10:958,78,0	0/0:9,0:9:27.09:0,27,377	0/0:17,0:15:40.10:0,40,428	0/0:16,0:14:32.39:0,32,341	0/0:24,0:24:72.21:0,72,967	1/1:1,13:13:30.06:394,30,0	1/1:2,8:10:27.04:341,27,0	0/1:24,0:24:35.30:35,0,99	1/1:6,7:13:33.47:312,33,0	0/0:23,0:23:69.22:0,69,936	0/0:22,0:22:66.20:0,66,880	1/1:1,15:16:48.06:615,48,0	1/1:3,18:21:56.98:693,57,0	1/1:2,10:12:18.91:377,19,0	0/0:12,0:12:33.10:0,33,444	1/1:5,10:15:41.98:511,42,0	1/1:5,15:20:56.52:625,57,0	1/1:4,12:16:48.01:583,48,0	0/0:17,0:16:51.14:0,51,652	1/1:4,19:23:69.04:836,69,0	1/1:3,7:10:27.35:271,27,0	1/1:1,12:13:32.91:433,33,0	1/1:0,12:12:33.09:457,33,0	1/1:3,6:9:14.70:135,15,0	1/1:1,16:17:51.10:678,51,0	1/1:4,13:17:39.71:562,40,0	1/1:5,18:23:69.12:878,69,0	0/1:3,10:13:2.37:426,0,2
chr10	20938830	.	G	GTTT	5556.96	PASS	AB=0.621;AC=36;AF=0.643;AN=56;BaseQRankSum=3.034;DP=541;FS=0.933;HRun=13;HaplotypeScore=102.5488;InbreedingCoeff=0.8290;MQ=73.61;MQ0=0;MQRankSum=-0.586;QD=14.18;ReadPosRankSum=0.503;VQSLOD=3.5195;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,3:29:23.36:423,23,0	0/0:10,0:10:20.83:0,21,215	0/0:18,0:13:17.76:0,18,160	0/0:12,0:13:14.24:0,14,108	0/0:22,0:25:31.39:0,31,508	1/1:5,1:14:29.42:243,29,0	1/1:9,1:26:29.21:230,29,0	0/0:10,0:20:0.62:0,1,102	1/1:2,2:15:20.88:214,21,0	0/0:12,0:14:24.13:0,24,260	0/0:11,0:11:26.98:0,27,290	0/1:2,2:15:1.07:237,0,1	1/1:9,0:12:20.93:176,21,0	1/1:12,0:16:35.86:305,36,0	0/0:20,0:22:56.85:0,57,570	1/1:5,2:24:36.66:321,37,0	1/1:15,4:36:78.38:693,78,0	1/1:4,0:32:43.01:315,43,0	0/0:12,0:14:26.78:0,27,261	0/1:7,1:12:7.10:172,0,7	1/1:7,0:19:21:146,21,0	1/1:16,0:24:25.21:391,25,0	1/1:9,1:18:35.92:312,36,0	1/1:4,2:25:7.87:291,8,0	1/1:10,0:18:38.32:288,38,0	1/1:8,0:24:13.80:284,14,0	1/1:8,2:18:40.92:362,41,0	1/1:2,0:15:23.94:154,24,0
chr10	20943517	.	CT	C	3126.89	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=12.189;DP=623;FS=4.778;HRun=7;HaplotypeScore=64.8277;InbreedingCoeff=0.9988;MQ=75.28;MQ0=0;MQRankSum=0.642;QD=24.05;ReadPosRankSum=0.530;VQSLOD=3.9463;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,114,1432	1/1:3,9:12:30.07:306,30,0	0/0:23,1:20:31.92:0,32,372	0/0:21,0:18:26.15:0,26,325	1/1:3,32:35:81.13:814,81,0	0/0:20,0:20:54.17:0,54,679	0/0:12,0:12:33.09:0,33,402	0/0:32,0:32:81.24:0,81,997	0/0:20,0:20:57.18:0,57,717	1/1:5,26:31:75.16:764,75,0	1/1:1,25:26:69.15:703,69,0	0/0:16,0:16:36.12:0,36,452	0/0:24,0:24:66.21:0,66,829	0/0:20,0:20:57.18:0,57,717	0/0:23,0:23:60.17:0,60,730	0/0:21,0:21:60.18:0,60,743	0/0:27,0:27:81.21:0,81,977	0/0:29,0:29:78.20:0,78,950	1/1:2,24:25:72.12:715,72,0	0/0:17,0:17:45.14:0,45,565	0/0:10,0:10:24.08:0,24,302	0/0:11,0:11:30.10:0,30,377	0/0:15,0:15:42.12:0,42,516	0/0:14,0:14:36.12:0,36,453	0/0:21,0:21:57.18:0,57,717	0/0:26,0:26:72.22:0,72,895	0/0:30,0:30:78.25:0,78,979	0/0:16,0:16:42.13:0,42,528
chr10	20947443	.	C	CTCCAGT	28085.78	PASS	AB=0.560;AC=37;AF=0.661;AN=56;BaseQRankSum=3.249;DP=555;FS=13.285;HRun=0;HaplotypeScore=131.8936;InbreedingCoeff=0.9201;MQ=54.02;MQ0=1;MQRankSum=-15.913;QD=72.76;ReadPosRankSum=0.115;VQSLOD=5.0294;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,27:33:72.20:2202,72,0	0/0:10,0:10:24.08:0,24,553	0/0:16,0:18:22.19:0,22,771	0/0:20,0:19:22.14:0,22,970	0/0:15,0:15:42.14:0,42,948	1/1:4,13:17:45.15:1527,45,0	1/1:6,12:19:48.16:1485,48,0	0/0:29,0:29:66.21:0,66,1424	1/1:4,18:23:54.19:1886,54,0	0/0:25,0:25:72.23:0,72,1562	0/0:11,0:11:30.10:0,30,673	1/1:7,16:23:63.22:2031,63,0	1/1:4,13:18:45.11:1447,45,0	1/1:2,19:23:54.19:1788,54,0	0/0:23,0:23:57.11:0,57,1215	1/1:4,17:21:57.20:1906,57,0	1/1:6,16:24:48.12:1566,48,0	0/1:3,8:14:14.91:792,0,15	0/0:18,0:18:48.16:0,48,1104	1/1:7,13:23:50.97:1257,51,0	1/1:10,10:21:41.84:825,42,0	1/1:3,13:17:51.13:1572,51,0	1/1:2,16:19:47.90:1094,48,0	1/1:12,10:24:50.90:1373,51,0	1/1:3,13:17:48.08:1461,48,0	1/1:3,17:24:66.21:2012,66,0	1/1:6,12:19:36.12:1258,36,0	1/1:2,4:6:18.06:605,18,0
chr10	20947628	.	T	TAAAA	3173.37	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=1.558;DP=518;FS=0.480;HRun=10;HaplotypeScore=88.4291;InbreedingCoeff=0.9815;MQ=65.81;MQ0=7;MQRankSum=-4.424;QD=30.51;ReadPosRankSum=-5.123;VQSLOD=1.1602;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:47:99:0,115,1577	1/1:3,3:6:15.05:286,15,0	0/0:23,0:14:16.88:0,17,235	0/0:18,0:10:17.77:0,18,221	1/1:3,14:18:45.11:901,45,0	0/0:15,0:14:33.01:0,33,466	0/0:12,0:12:36.09:0,36,472	1/1:9,0:24:47.05:326,47,0	0/0:6,0:6:15.03:0,15,211	1/1:10,7:17:27.09:564,27,0	1/1:4,9:14:30.10:608,30,0	0/0:18,0:19:48.11:0,48,660	0/0:16,0:14:33.05:0,33,467	0/0:14,0:13:39.11:0,39,532	0/0:21,0:21:48.13:0,48,639	0/0:13,0:13:33.04:0,33,446	0/0:35,0:36:87.05:0,87,1151	0/0:22,0:24:54.07:0,54,700	1/1:13,9:22:38.57:675,39,0	0/0:9,0:10:24.08:0,24,337	0/0:12,0:12:33.09:0,33,467	0/0:9,0:8:24.08:0,24,339	0/0:11,0:11:33.11:0,33,466	0/0:20,0:20:48.05:0,48,650	0/0:19,0:19:39.02:0,39,551	0/0:24,0:24:11.61:0,12,809	0/0:23,0:22:48.07:0,48,657	0/0:22,0:22:57.19:0,57,794
chr10	20947742	.	G	GA	1336.40	PASS	AB=0.815;AC=15;AF=0.268;AN=56;BaseQRankSum=-3.173;DP=462;FS=7.660;HRun=11;HaplotypeScore=50.8539;InbreedingCoeff=0.3199;MQ=72.20;MQ0=0;MQRankSum=-0.834;QD=8.57;ReadPosRankSum=-3.324;VQSLOD=0.9211;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,2:35:55.22:0,55,598	1/1:1,2:3:3.01:30,3,0	0/0:8,0:8:7.50:0,7,38	0/1:4,0:8:6.70:7,0,20	0/1:6,14:20:41.95:312,0,42	0/1:17,1:20:12.86:13,0,224	0/0:16,0:17:46.86:0,47,354	0/1:9,18:28:19.48:390,0,19	0/0:14,0:14:35.84:0,36,279	1/1:5,3:10:20.62:158,21,0	1/1:3,10:13:8.27:242,8,0	0/0:11,0:11:26.89:0,27,209	0/0:14,0:14:1.49:0,1,160	0/1:13,2:15:0.59:1,0,179	0/0:15,0:15:32.86:0,33,255	0/0:11,0:11:26.88:0,27,209	0/0:27,0:28:64.73:0,65,493	0/0:12,0:13:28.93:0,29,215	1/1:6,14:20:15.80:327,16,0	0/0:18,0:19:34:0,34,260	0/1:12,1:13:0.56:1,0,179	0/0:9,1:11:2.42:0,2,125	0/0:18,0:20:39.89:0,40,288	0/0:24,0:25:49.82:0,50,377	0/0:11,0:12:22.95:0,23,168	0/0:23,0:24:58.80:0,59,447	0/0:27,0:28:67.76:0,68,514	0/1:5,1:6:15.50:15,0,78
chr10	20950506	.	T	TC	1229.46	PASS	AB=0.842;AC=28;AF=0.500;AN=56;BaseQRankSum=-5.371;DP=415;FS=10.043;HRun=11;HaplotypeScore=70.0287;InbreedingCoeff=0.0319;MQ=79.13;MQ0=1;MQRankSum=-2.450;QD=4.20;ReadPosRankSum=-1.113;VQSLOD=0.1438;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:17,6:23:17.24:123,0,17	1/1:12,1:13:8.69:91,9,0	0/0:10,0:16:23.83:0,24,107	0/0:20,0:20:1.75:0,2,151	0/0:13,0:16:12.98:0,13,81	0/1:8,6:14:11.21:79,0,11	0/1:21,3:25:26.31:146,0,26	0/1:15,0:16:11.27:11,0,41	0/1:8,0:8:34.43:44,0,34	0/0:9,0:12:13.02:0,13,81	0/0:10,0:10:14.13:0,14,99	0/1:9,7:16:31.72:64,0,32	0/1:10,2:13:32.38:62,0,32	0/1:4,7:11:0.01:0,0,0	0/0:13,0:17:17.96:0,18,110	1/1:2,0:13:2.84:14,3,0	1/1:12,0:13:19.19:145,19,0	1/1:7,0:7:5.84:40,6,0	0/0:18,0:20:36.37:0,36,243	0/1:9,3:12:11.45:62,0,11	1/1:8,3:11:9.02:91,9,0	1/1:7,7:14:2.67:30,3,0	0/1:11,1:13:34.98:35,0,58	1/1:4,8:12:8.86:91,9,0	0/1:18,1:21:27.23:27,0,83	0/0:6,2:8:2.31:0,2,22	0/1:21,4:25:46.45:127,0,46	1/1:11,1:12:4.35:117,4,0
chr10	20950790	.	T	TTTC	1945.83	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-7.820;DP=895;FS=6.762;HRun=0;HaplotypeScore=123.7293;InbreedingCoeff=0.9999;MQ=88.67;MQ0=0;MQRankSum=-3.836;QD=46.33;ReadPosRankSum=-4.427;VQSLOD=4.3000;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:65,0:65:99:0,169,2620	0/0:15,0:15:42.14:0,42,657	0/0:35,0:35:81.25:0,81,1222	0/0:37,0:37:75.69:0,76,1115	0/0:19,0:19:57.19:0,57,890	0/0:32,0:32:87.29:0,87,1349	0/0:31,0:31:81.28:0,81,1267	1/1:12,29:42:99:2041,99,0	0/0:31,0:31:78.25:0,78,1197	0/0:47,0:47:99:0,117,1785	0/0:20,0:20:57.19:0,57,890	0/0:30,0:30:72.24:0,72,1125	0/0:31,0:31:84.29:0,84,1314	0/0:24,0:24:66.22:0,66,1032	0/0:49,0:49:99:0,135,2088	0/0:34,0:34:96.33:0,96,1501	0/0:37,0:37:99:0,102,1595	0/0:25,0:25:66.22:0,66,1032	0/0:23,0:23:63.21:0,63,964	0/0:24,0:24:63.20:0,63,962	0/0:32,0:32:87.28:0,87,1335	0/0:35,0:35:96.31:0,96,1478	0/0:20,0:20:54.17:0,54,819	0/0:34,0:34:99:0,102,1591	0/0:34,0:34:96.33:0,96,1501	0/0:40,0:40:99:0,108,1689	0/0:33,0:33:84.29:0,84,1314	0/0:16,0:16:39.13:0,39,610
chr10	20950964	.	GTA	G	9602.71	PASS	AB=0.683;AC=48;AF=0.857;AN=56;BaseQRankSum=9.370;DP=777;FS=25.015;HRun=0;HaplotypeScore=267.8192;InbreedingCoeff=0.6162;MQ=46.77;MQ0=9;MQRankSum=-2.995;QD=14.82;ReadPosRankSum=3.077;VQSLOD=3.5526;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:16,17:33:16.65:174,17,0	1/1:3,7:10:20.31:242,20,0	0/0:43,0:25:57.49:0,57,949	0/0:42,0:22:33.09:0,33,545	1/1:9,11:20:13.91:146,14,0	1/1:4,16:20:5.54:84,6,0	1/1:16,19:35:26.23:275,26,0	0/1:24,13:31:99:458,0,301	1/1:12,23:35:50.93:565,51,0	1/1:6,28:34:94.40:1197,94,0	1/1:4,10:13:11.98:97,12,0	1/1:8,24:32:60.13:760,60,0	1/1:14,21:34:75.60:888,76,0	0/1:12,18:30:6.51:463,0,7	0/0:44,0:44:99:0,132,2302	1/1:7,27:34:38.94:461,39,0	1/1:9,10:19:21.85:276,22,0	1/1:9,9:18:33.23:391,33,0	1/1:2,7:7:18.01:211,18,0	1/1:4,14:18:15.52:209,16,0	1/1:29,19:48:20.56:176,21,0	1/1:5,24:29:24.06:316,24,0	1/1:8,15:23:17.89:199,18,0	1/1:11,22:32:5.20:42,5,0	1/1:8,9:17:14.99:141,15,0	1/1:11,24:35:99:1257,105,0	1/1:10,15:25:44.12:555,44,0	1/1:4,1:5:2.44:19,2,0
chr10	20950973	.	TGA	T	8548.83	PASS	AB=0.982;AC=46;AF=0.852;AN=54;BaseQRankSum=12.274;DP=729;FS=22.746;HRun=0;HaplotypeScore=257.9060;InbreedingCoeff=0.6129;MQ=41.81;MQ0=9;MQRankSum=-1.849;QD=14.87;ReadPosRankSum=3.910;VQSLOD=3.4850;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:29:8.18:105,8,0	1/1:10,0:10:23.53:255,24,0	0/0:52,0:26:58.01:0,58,1032	0/0:46,0:20:24.02:0,24,592	1/1:12,3:15:9.01:98,9,0	1/1:17,1:18:6.02:85,6,0	1/1:29,1:30:14.95:180,15,0	0/1:36,0:30:99:306,0,507	1/1:33,0:33:50.97:562,51,0	1/1:32,2:34:97.07:1229,97,0	./.	1/1:29,0:29:51.15:687,51,0	1/1:28,2:29:69.56:848,70,0	0/1:26,1:27:4.30:399,0,4	0/0:45,0:45:99:0,135,2233	1/1:32,0:32:29.99:398,30,0	1/1:18,0:18:25.47:299,25,0	1/1:14,2:16:31.72:367,32,0	1/1:10,0:7:12.51:169,13,0	1/1:17,0:17:15.05:209,15,0	1/1:39,0:39:8.99:92,9,0	1/1:28,0:28:21.07:294,21,0	1/1:20,0:20:15.02:174,15,0	1/1:31,1:31:5.49:45,5,0	1/1:15,1:16:11.98:115,12,0	1/1:28,2:30:90.17:1127,90,0	1/1:22,0:22:38.58:502,39,0	1/1:4,0:4:0.47:1,0,0
chr10	20950980	.	GCA	G	4360.14	PASS	AB=0.978;AC=43;AF=0.827;AN=52;BaseQRankSum=12.129;DP=671;FS=27.451;HRun=0;HaplotypeScore=247.5673;InbreedingCoeff=0.4057;MQ=38.18;MQ0=15;MQRankSum=-1.826;QD=8.69;ReadPosRankSum=5.438;VQSLOD=2.7250;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:24:5.14:49,5,0	1/1:8,0:8:20.35:158,20,0	0/0:62,1:26:73.76:0,74,1360	0/0:51,1:21:57.09:0,57,953	1/1:13,0:13:5.99:54,6,0	1/1:17,0:17:5.62:40,6,0	1/1:23,2:25:8.41:109,8,0	0/1:40,1:33:99:113,0,946	1/1:25,1:26:16.51:286,17,0	1/1:29,1:29:82.97:626,83,0	./.	1/1:27,0:27:47.42:360,47,0	1/1:23,2:24:56.98:533,57,0	0/1:22,1:23:29.52:211,0,30	0/0:43,0:43:99:0,129,2475	1/1:28,0:28:26.12:181,26,0	1/1:14,1:15:20.80:151,21,0	0/1:15,0:15:23.29:107,0,23	1/1:10,0:7:1.34:86,1,0	1/1:15,0:15:14.37:100,14,0	1/1:31,0:30:2.88:17,3,0	1/1:25,1:26:20.62:130,21,0	1/1:16,1:17:8.42:54,8,0	1/1:29,1:29:6.50:79,7,0	1/1:11,0:11:2.94:18,3,0	1/1:26,0:26:76.82:572,77,0	1/1:18,1:19:38.29:325,38,0	./.
chr10	20950998	.	A	ATG	3821.92	PASS	AB=0.967;AC=34;AF=0.739;AN=46;BaseQRankSum=6.079;DP=576;FS=17.791;HRun=0;HaplotypeScore=212.5667;InbreedingCoeff=0.6687;MQ=33.34;MQ0=23;MQRankSum=-7.620;QD=10.86;ReadPosRankSum=1.206;VQSLOD=1.7530;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,1:17:1.25:0,1,3	1/1:7,1:8:14.99:154,15,0	0/0:58,0:15:24.07:0,24,292	0/0:51,0:20:35.94:0,36,388	./.	0/1:13,0:13:0:0,0,0	1/1:18,1:19:1.82:6,2,0	1/1:30,16:41:85.53:1355,86,0	1/1:22,1:23:20.42:210,20,0	1/1:22,1:21:32.91:439,33,0	./.	1/1:19,1:20:6.01:69,6,0	1/1:17,3:19:26.96:323,27,0	1/1:20,1:21:9.03:113,9,0	0/0:43,0:43:99:0,111,1410	1/1:24,0:24:8.96:108,9,0	1/1:12,0:12:23.26:308,23,0	1/1:10,0:10:18.02:190,18,0	1/1:8,0:5:6.57:54,7,0	./.	0/1:23,1:22:0.02:0,0,0	./.	0/1:16,0:16:0.11:0,0,0	1/1:19,1:19:3:29,3,0	0/1:9,1:10:0.02:0,0,0	1/1:21,0:21:24.06:285,24,0	1/1:14,0:14:15.58:179,16,0	./.
chr10	20951007	.	T	TGTGA	5727.52	PASS	AB=0.684;AC=32;AF=0.640;AN=50;BaseQRankSum=10.009;DP=513;FS=20.108;HRun=0;HaplotypeScore=187.0423;InbreedingCoeff=0.4805;MQ=31.49;MQ0=28;MQRankSum=-7.962;QD=17.46;ReadPosRankSum=0.168;VQSLOD=3.1992;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,14:18:2.57:11,3,0	1/1:3,3:6:15.05:326,15,0	0/0:53,0:9:24.07:0,24,427	0/0:49,0:18:45.89:0,46,655	0/0:1,4:6:0:0,0,0	./.	0/1:4,8:12:0.27:0,0,1	0/1:41,0:39:13.04:271,0,13	1/1:8,11:19:20.84:389,21,0	1/1:10,9:17:38.83:913,39,0	./.	1/1:7,7:14:8.93:220,9,0	1/1:9,8:16:37.64:727,38,0	1/1:6,9:14:14.72:239,15,0	0/0:43,0:43:99:0,129,2297	1/1:7,11:18:11.70:255,12,0	1/1:3,10:13:15.13:691,15,0	0/1:3,5:8:19.66:387,0,20	1/1:3,1:3:5.85:69,6,0	0/1:3,7:9:0:0,0,0	0/1:20,14:32:0.39:0,0,0	0/1:10,8:18:0:0,0,0	0/1:5,9:14:0.21:0,0,0	0/1:12,13:24:0.70:79,0,1	0/0:4,5:9:0:0,0,0	1/1:6,8:13:35.99:795,36,0	1/1:0,8:8:14.93:354,15,0	./.
chr10	20951018	.	GCA	G	644.67	PASS	AB=0.975;AC=23;AF=0.426;AN=54;BaseQRankSum=7.252;DP=467;FS=32.174;HRun=0;HaplotypeScore=156.3740;InbreedingCoeff=0.1049;MQ=32.25;MQ0=22;MQRankSum=-4.172;QD=3.14;ReadPosRankSum=-1.791;VQSLOD=0.8364;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:0.84:0,1,2	1/1:3,0:3:8.81:70,9,0	0/0:53,1:12:33.07:0,33,504	0/0:46,2:16:44.89:0,45,764	0/1:7,0:7:0:0,0,0	0/0:11,0:11:2.57:0,3,11	0/1:6,0:6:0.01:0,0,0	0/0:41,1:40:56.56:0,57,1896	0/1:18,2:20:11.65:85,0,12	0/1:9,0:8:50.10:82,0,50	0/0:9,0:8:0:0,0,0	1/1:11,0:11:5.88:52,6,0	0/1:11,2:13:38.41:120,0,38	1/1:12,1:12:2.72:36,3,0	0/0:45,0:45:99:0,132,2544	1/1:17,1:18:2.15:27,2,0	0/1:17,0:17:81.45:81,0,91	0/1:9,0:9:66.55:67,0,130	1/1:2,1:1:2.94:18,3,0	0/1:7,0:6:0.01:0,0,0	0/1:29,1:28:0.19:0,0,0	0/1:12,1:13:0.08:0,0,0	0/0:9,1:10:0:0,0,0	0/0:23,0:23:3:0,3,30	0/1:8,0:8:0.03:0,0,0	0/1:9,0:8:25.68:97,0,26	0/1:9,0:9:39.91:40,0,80	./.
chr10	20951029	.	TGC	T	863.53	PASS	AB=0.806;AC=34;AF=0.630;AN=54;BaseQRankSum=9.665;DP=458;FS=1.290;HRun=0;HaplotypeScore=166.7638;InbreedingCoeff=0.5582;MQ=33.59;MQ0=16;MQRankSum=-7.718;QD=3.54;ReadPosRankSum=-2.646;VQSLOD=2.6047;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:15,3:18:0.05:0,0,0	1/1:3,0:3:2.74:13,3,0	0/0:50,0:14:32.04:0,32,468	0/0:48,0:18:40.93:0,41,600	0/1:6,2:8:0.11:0,0,0	1/1:5,3:8:3:25,3,0	0/1:3,2:5:0.01:0,0,0	0/0:41,0:40:99:0,115,1724	1/1:9,6:15:10.21:84,10,0	1/1:12,2:13:26.06:235,26,0	0/1:9,0:8:0:0,0,0	1/1:11,4:15:5.61:35,6,0	1/1:7,5:12:11.81:80,12,0	0/1:10,5:14:0.09:0,0,1	0/0:51,0:51:99:0,150,2517	1/1:7,6:13:2.83:17,3,0	1/1:8,5:13:16.99:105,17,0	1/1:6,3:9:9.65:124,10,0	1/1:4,0:3:5.91:38,6,0	0/1:7,0:7:0.02:0,0,0	0/1:15,14:27:0.16:0,0,0	0/1:4,7:11:0.08:0,0,0	0/1:8,1:9:0.01:0,0,0	0/0:14,10:24:2.94:0,3,23	0/1:4,2:6:0.10:0,0,0	1/1:8,1:8:6.09:104,6,0	1/1:8,4:12:9.34:142,9,0	./.
chr10	20951037	.	TGCGTA	T	2508.69	PASS	AB=0.972;AC=34;AF=0.630;AN=54;BaseQRankSum=10.246;DP=476;FS=9.033;HRun=0;HaplotypeScore=199.6452;InbreedingCoeff=0.5449;MQ=36.33;MQ0=9;MQRankSum=-7.785;QD=9.61;ReadPosRankSum=-1.449;VQSLOD=1.4753;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:18,2:20:0.66:1,0,1	1/1:4,0:4:2.42:28,2,0	0/0:52,0:22:61.34:0,61,1483	0/0:45,0:17:32.54:0,33,986	0/1:8,0:8:0.30:0,0,1	1/1:7,0:7:1.88:41,2,0	0/1:5,0:5:0:0,0,0	0/0:38,0:38:99:0,111,3237	1/1:20,0:20:9:93,9,0	1/1:15,0:15:23.13:666,23,0	0/1:8,0:7:0.22:0,0,1	1/1:18,1:19:11.29:178,11,0	1/1:11,1:12:17.56:240,18,0	0/1:14,0:13:0.25:0,0,1	0/0:53,0:53:99:0,160,4871	1/1:14,0:14:5.01:117,5,0	1/1:14,1:15:13.25:168,13,0	1/1:9,0:9:2.67:218,3,0	1/1:5,0:5:15.05:246,15,0	0/1:6,1:7:0.24:0,0,1	0/1:28,2:29:0.98:1,0,1	0/1:9,0:9:0.62:1,0,1	0/1:7,0:7:0.18:0,0,0	0/0:27,0:27:2.96:0,3,19	0/1:9,0:9:0.37:0,0,1	1/1:11,0:11:7.11:360,7,0	1/1:13,0:13:6.82:290,7,0	./.
chr10	20951041	.	TA	T	1951.88	PASS	AB=0.515;AC=32;AF=0.615;AN=52;BaseQRankSum=10.677;DP=435;FS=12.012;HRun=1;HaplotypeScore=171.8363;InbreedingCoeff=0.6069;MQ=37.15;MQ0=5;MQRankSum=-7.678;QD=9.08;ReadPosRankSum=0.152;VQSLOD=-0.0376;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:2,9:17:0.36:0,0,1	1/1:0,3:3:0.23:0,0,0	0/0:51,1:26:74.96:0,75,1030	0/0:45,2:15:32.04:0,32,440	0/1:0,7:7:0.11:0,0,1	1/1:0,7:7:1.70:29,2,0	./.	0/0:38,0:38:99:0,114,1789	1/1:1,15:16:8.35:75,8,0	1/1:0,14:14:42.12:532,42,0	0/1:1,5:6:0.24:0,0,1	1/1:1,16:17:11.18:139,11,0	1/1:1,11:12:17.57:217,18,0	0/1:0,12:12:0.22:0,0,1	0/0:54,0:54:99:0,157,2494	1/1:0,12:12:4.92:78,5,0	1/1:1,8:12:13.36:92,13,0	1/1:1,5:8:20.60:182,21,0	1/1:0,5:5:15.05:202,15,0	0/0:1,4:5:0:0,0,1	0/1:4,17:26:0.59:1,0,1	0/1:0,8:8:0.63:1,0,1	0/1:0,5:5:0.22:0,0,0	0/0:1,17:20:0.47:0,0,1	0/1:0,8:8:0.41:0,0,1	1/1:0,9:9:24.07:308,24,0	1/1:0,10:10:20.80:234,21,0	./.
chr10	20951072	.	T	TGA	10468.64	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=12.484;DP=773;FS=21.337;HRun=0;HaplotypeScore=292.1856;InbreedingCoeff=0.9079;MQ=39.14;MQ0=29;MQRankSum=-3.477;QD=18.37;ReadPosRankSum=-2.912;VQSLOD=2.9614;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,13:24:14.61:177,15,0	1/1:6,6:13:26.96:355,27,0	0/0:42,0:13:28.42:0,28,353	0/0:54,0:10:14.95:0,15,129	1/1:10,13:23:23.72:269,24,0	1/1:4,13:17:17.96:287,18,0	1/1:8,8:16:20.93:372,21,0	0/0:46,0:37:87.31:0,87,1056	1/1:13,19:32:35.81:396,36,0	1/1:15,23:37:83.61:1475,84,0	1/1:3,10:13:2.82:54,3,0	1/1:11,25:36:44.95:640,45,0	1/1:9,14:23:53.82:769,54,0	1/1:6,16:22:17.64:259,18,0	0/0:59,0:59:99:0,159,2104	1/1:3,18:21:14.91:209,15,0	1/1:15,14:28:33.32:623,33,0	1/1:12,8:20:28.09:590,28,0	1/1:10,8:15:42.04:605,42,0	1/1:5,12:17:14.92:184,15,0	1/1:36,21:54:32.50:371,32,0	1/1:8,15:23:17.73:203,18,0	1/1:8,9:17:20.97:197,21,0	1/1:17,19:36:9.19:75,9,0	1/1:7,13:20:17.93:236,18,0	1/1:8,15:23:47.53:1007,48,0	1/1:8,15:23:42.43:785,42,0	1/1:5,4:9:27:332,27,0
chr10	20951126	.	A	AGT	26160.21	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-4.894;DP=1086;FS=16.003;HRun=0;HaplotypeScore=271.5269;InbreedingCoeff=0.9982;MQ=52.15;MQ0=10;MQRankSum=5.722;QD=27.89;ReadPosRankSum=5.415;VQSLOD=4.2994;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,43:51:72.13:1233,72,0	1/1:4,16:20:42.04:703,42,0	0/0:47,0:19:43.18:0,43,535	0/0:53,0:32:21.38:0,21,679	1/1:5,21:27:44.90:771,45,0	1/1:4,19:23:33:550,33,0	1/1:5,36:42:60.20:1029,60,0	1/1:13,35:48:71.34:1520,71,0	1/1:8,34:42:48.11:786,48,0	1/1:11,40:51:99:1912,117,0	1/1:4,18:22:32.92:552,33,0	1/1:7,42:50:81.11:1356,81,0	1/1:4,33:38:69.23:1164,69,0	1/1:5,31:37:57.05:969,57,0	0/0:46,0:46:99:0,117,1506	1/1:6,21:27:30.10:515,30,0	1/1:8,29:37:51.09:851,51,0	1/1:2,28:32:67.44:1102,67,0	1/1:8,16:23:45.08:673,45,0	1/1:5,21:26:48.08:822,48,0	1/1:10,73:84:99:1902,111,0	1/1:3,48:51:99:1749,102,0	1/1:3,23:27:54.18:923,54,0	1/1:6,45:50:51.67:878,52,0	1/1:7,30:37:44.96:772,45,0	1/1:9,28:36:84.26:1341,84,0	1/1:5,30:35:87.30:1470,87,0	1/1:0,15:16:36.12:616,36,0
chr10	20951815	.	G	GTGGATGGA	11387.87	PASS	AB=0.729;AC=47;AF=0.839;AN=56;BaseQRankSum=8.295;DP=809;FS=3.344;HRun=0;HaplotypeScore=225.5811;InbreedingCoeff=0.0653;MQ=67.76;MQ0=1;MQRankSum=-4.062;QD=14.56;ReadPosRankSum=2.964;VQSLOD=4.0684;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:42:29.44:300,0,29	1/1:4,0:10:14.98:124,15,0	0/1:34,0:28:28.06:28,0,575	0/1:34,0:27:55.74:56,0,589	1/1:8,0:27:53.78:439,54,0	1/1:14,0:24:23.97:197,24,0	1/1:12,0:27:26.97:222,27,0	1/1:8,0:25:50.97:484,51,0	1/1:10,0:32:47.94:394,48,0	0/1:9,0:28:93.89:424,0,94	1/1:8,0:24:41.90:351,42,0	1/1:4,0:29:56.91:471,57,0	1/1:7,0:36:83.51:676,84,0	1/1:12,0:41:65.92:543,66,0	0/0:27,0:27:72.25:0,72,1785	1/1:8,18:28:44.84:1868,45,0	1/1:11,4:18:8.88:274,9,0	1/1:4,8:13:9.03:365,9,0	0/1:17,0:36:16.95:442,0,17	1/1:7,0:23:35.98:313,36,0	1/1:9,0:43:59.92:492,60,0	1/1:5,0:19:35.96:295,36,0	1/1:2,0:14:29.91:240,30,0	0/1:14,0:43:58.97:469,0,59	1/1:5,0:20:35.96:296,36,0	1/1:16,0:46:89.98:863,90,0	0/1:9,0:39:11.02:443,0,11	1/1:11,0:27:38.96:321,39,0
chr10	20951839	.	A	AT	1139.92	PASS	AB=0.995;AC=24;AF=0.429;AN=56;BaseQRankSum=17.545;DP=730;FS=5.393;HRun=0;HaplotypeScore=146.7944;InbreedingCoeff=-0.6056;MQ=75.31;MQ0=0;MQRankSum=-4.181;QD=1.90;ReadPosRankSum=12.417;VQSLOD=-0.4498;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:32,0:32:6.66:7,0,524	0/1:9,0:9:10.50:10,0,107	0/0:36,2:35:57.41:0,57,1148	0/0:31,4:30:29.69:0,30,861	0/1:22,1:23:99:108,0,129	0/1:18,0:18:7.15:7,0,295	0/1:19,0:19:26.96:27,0,251	0/1:30,0:30:10.40:10,0,750	0/1:29,0:29:38.15:38,0,259	0/1:28,0:28:66.69:67,0,435	0/1:17,0:17:35.64:36,0,102	0/1:32,0:32:55.35:55,0,234	0/1:38,1:39:99:108,0,253	1/1:29,0:29:5.90:89,6,0	0/0:32,0:32:93.27:0,93,1277	0/1:27,0:27:35.66:36,0,283	0/0:15,0:15:10.69:0,11,276	0/0:9,0:9:8.71:0,9,189	0/1:32,0:32:61.95:62,0,658	0/1:22,0:22:60.02:60,0,288	0/1:37,0:37:69.97:70,0,192	0/1:17,1:18:38.88:39,0,94	0/1:13,0:13:44.10:44,0,57	0/1:33,0:33:65.19:65,0,211	0/1:22,0:22:31.95:32,0,152	0/1:31,0:31:87.64:239,0,88	0/1:37,0:37:62.97:63,0,155	0/1:24,0:24:26.87:27,0,284
chr10	20952021	.	ATCTCTCTC	A	1432.57	PASS	AB=0.714;AC=29;AF=0.725;AN=40;BaseQRankSum=2.952;DP=410;FS=28.684;HRun=0;HaplotypeScore=102.0277;InbreedingCoeff=0.3619;MQ=72.65;MQ0=10;MQRankSum=-0.273;QD=6.92;ReadPosRankSum=2.786;VQSLOD=0.2764;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:14,1:15:3.49:78,3,0	0/1:3,0:5:19.97:50,0,20	./.	./.	./.	1/1:14,5:18:11.99:241,12,0	1/1:17,0:16:3.48:69,3,0	0/0:34,0:34:10.38:0,10,73	./.	1/1:10,1:11:3.01:74,3,0	1/1:15,0:15:3.01:55,3,0	1/1:12,0:11:9.03:160,9,0	0/0:12,0:12:3.01:0,3,81	./.	0/0:16,0:16:12.04:0,12,368	1/1:9,0:9:2.86:25,3,0	1/1:14,0:17:9.03:168,9,0	1/1:13,0:16:6.02:84,6,0	1/1:16,0:15:2.13:46,2,0	1/1:12,2:14:3.01:74,3,0	1/1:12,0:12:3.01:69,3,0	./.	0/0:10,1:12:2.84:0,3,14	./.	1/1:10,0:10:5.74:36,6,0	0/0:12,0:12:0.89:0,1,2	1/1:11,5:15:15.05:329,15,0	./.
chr10	20954492	.	C	CA	5995.76	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-11.444;DP=514;FS=17.443;HRun=0;HaplotypeScore=54.5589;InbreedingCoeff=0.9942;MQ=87.59;MQ0=0;MQRankSum=-1.433;QD=41.07;ReadPosRankSum=1.001;VQSLOD=3.1539;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:64.95:0,65,812	1/1:0,10:10:27.09:431,27,0	0/0:18,0:18:50.70:0,51,592	0/0:21,0:22:55.52:0,56,557	1/1:0,14:14:36.12:559,36,0	0/0:20,0:20:54.11:0,54,684	0/0:24,0:24:72.23:0,72,990	0/0:23,0:23:66.20:0,66,877	0/0:10,0:10:30.10:0,30,419	1/1:0,38:38:99:1672,111,0	1/1:1,13:14:33.11:526,33,0	0/0:10,0:10:30.10:0,30,419	0/0:17,0:17:51.13:0,51,654	0/0:21,0:21:63.19:0,63,848	0/0:23,0:23:66.20:0,66,889	1/1:1,20:21:12.27:772,12,0	1/1:0,17:17:48.16:766,48,0	1/1:0,13:13:30.10:479,30,0	1/1:0,19:19:54.13:791,54,0	0/0:19,0:19:53.96:0,54,708	0/0:30,0:30:87.27:0,87,1196	0/0:16,0:16:45.14:0,45,599	0/0:13,0:13:39:0,39,515	0/0:24,0:24:69.19:0,69,909	0/0:18,0:18:54.18:0,54,753	0/0:14,0:13:42.13:0,42,559	0/0:14,0:14:42.05:0,42,510	0/0:9,0:9:24.08:0,24,335
chr10	20954601	.	C	CCT	1830.63	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-7.082;DP=669;FS=0.620;HRun=0;HaplotypeScore=101.6545;InbreedingCoeff=0.9496;MQ=73.15;MQ0=15;MQRankSum=1.409;QD=25.78;ReadPosRankSum=-1.481;VQSLOD=4.1479;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:85.15:0,85,1027	1/1:3,2:5:3.01:49,3,0	0/0:70,0:33:25.61:0,26,261	0/0:111,0:51:15.49:0,15,323	1/1:1,14:15:30.10:487,30,0	0/0:11,0:11:18.05:0,18,218	0/0:32,0:32:64.18:0,64,862	0/0:21,0:21:21.04:0,21,234	0/0:15,0:15:36.10:0,36,427	1/1:6,14:22:39.11:592,39,0	1/1:2,8:11:21.07:341,21,0	0/0:24,0:25:59.76:0,60,703	0/0:20,0:20:51.16:0,51,623	0/0:15,0:15:36.11:0,36,439	0/0:19,0:20:50.99:0,51,601	0/0:16,0:17:41.95:0,42,477	0/0:27,0:27:65.94:0,66,781	0/0:13,0:13:33.07:0,33,383	1/1:7,11:18:33.11:530,33,0	0/0:12,0:13:23.82:0,24,252	0/0:18,0:20:53.96:0,54,617	0/0:18,0:18:34.66:0,35,407	0/0:22,0:22:47.14:0,47,539	0/0:37,0:37:96.28:0,96,1158	0/0:13,0:13:32.75:0,33,364	0/0:13,0:13:32.93:0,33,380	0/0:17,0:17:42.13:0,42,512	0/0:11,0:11:27.08:0,27,328
chr10	20955426	.	GTGTCTGTC	G	8780.83	PASS	AB=0.726;AC=38;AF=0.704;AN=54;BaseQRankSum=2.513;DP=569;FS=2.910;HRun=0;HaplotypeScore=179.3432;InbreedingCoeff=0.7156;MQ=68.66;MQ0=6;MQRankSum=-4.290;QD=24.12;ReadPosRankSum=0.358;VQSLOD=4.1717;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:26,4:31:21.03:403,21,0	1/1:3,3:6:9:174,9,0	0/0:40,0:31:12.50:0,12,231	0/0:34,0:23:9.03:0,9,181	0/1:9,13:22:0.06:0,0,0	1/1:11,6:17:27.09:647,27,0	1/1:12,1:13:12.02:186,12,0	1/1:16,0:17:1.55:4,2,0	1/1:15,9:24:33.10:699,33,0	1/1:10,4:14:24.08:506,24,0	0/0:5,5:10:0:0,0,1	1/1:16,7:23:33.11:778,33,0	1/1:18,9:27:36.12:871,36,0	1/1:12,10:22:36.12:867,36,0	0/0:31,0:31:63.27:0,63,2098	0/0:29,0:29:54.17:0,54,1762	0/0:11,0:15:1.10:0,1,3	0/0:8,0:8:9.03:0,9,204	0/1:11,3:14:78.13:159,0,78	1/1:11,7:18:23.83:510,24,0	./.	1/1:5,4:9:18.06:386,18,0	1/1:9,4:14:18.05:359,18,0	1/1:21,5:26:17.74:420,18,0	1/1:5,11:16:18.06:438,18,0	1/1:13,9:22:30.10:743,30,0	1/1:15,4:20:21.07:480,21,0	1/1:7,2:9:6.02:151,6,0
chr10	20955480	.	CCCTCCCTA	C	6279	PASS	AB=1.000;AC=36;AF=0.643;AN=56;BaseQRankSum=5.137;DP=540;FS=0.000;HRun=0;HaplotypeScore=189.6589;InbreedingCoeff=0.6302;MQ=47.69;MQ0=9;MQRankSum=-5.063;QD=16.70;ReadPosRankSum=0.076;VQSLOD=3.9496;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,19:26:10.83:60,11,0	0/0:6,0:6:14.50:0,15,198	0/0:17,0:9:5.73:0,6,232	0/0:35,0:19:15.65:0,16,442	0/0:22,0:22:30.01:0,30,817	1/1:6,16:21:26.50:222,27,0	1/1:2,18:20:6.02:162,6,0	1/1:3,23:24:65.90:661,66,0	1/1:5,15:20:29.83:553,30,0	0/0:28,0:27:76.22:0,76,1849	0/0:12,0:12:24.07:0,24,732	1/1:7,11:18:19.03:248,19,0	1/1:8,17:24:31.74:509,32,0	1/1:7,15:22:20.67:242,21,0	0/0:28,0:28:84.16:0,84,2082	0/1:25,0:25:99:168,0,130	0/1:11,0:11:13.77:142,0,14	0/1:7,0:5:17.88:51,0,18	0/0:16,0:13:21.01:0,21,479	1/1:6,12:18:26.39:159,26,0	0/1:29,0:29:15.27:465,0,15	1/1:3,13:17:15.24:184,15,0	1/1:4,10:14:8.61:113,9,0	1/1:16,2:18:22.26:272,22,0	1/1:8,2:10:23.23:149,23,0	1/1:4,17:21:59.57:1086,60,0	1/1:4,18:22:38.24:673,38,0	1/1:1,4:5:8.98:159,9,0
chr10	20955484	.	CCCTACCTA	C	3880.04	PASS	AB=1.000;AC=36;AF=0.643;AN=56;BaseQRankSum=3.363;DP=529;FS=1.899;HRun=0;HaplotypeScore=192.0868;InbreedingCoeff=0.6379;MQ=48.60;MQ0=6;MQRankSum=-5.354;QD=11.51;ReadPosRankSum=3.278;VQSLOD=2.8619;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:8.20:0,8,49	0/0:6,0:6:12.04:0,12,249	0/0:18,0:12:24.07:0,24,440	0/0:34,0:20:32.78:0,33,659	0/0:24,0:24:33.05:0,33,1007	1/1:21,0:20:2.45:62,2,0	1/1:19,0:19:6.02:125,6,0	1/1:25,0:23:12.83:124,13,0	1/1:19,0:19:18.02:378,18,0	0/0:31,0:29:78.23:0,78,2230	0/0:12,0:12:27.09:0,27,838	1/1:16,0:16:5.98:133,6,0	1/1:24,0:23:17.97:320,18,0	1/1:21,0:21:5.94:119,6,0	0/0:29,0:29:63.20:0,63,1982	1/1:7,11:18:6.97:290,7,0	1/1:13,0:13:30.10:483,30,0	1/1:3,4:5:3.01:77,3,0	0/0:14,0:9:15.05:0,15,465	0/1:18,0:18:8.75:9,0,26	0/1:28,0:28:27.33:240,0,27	1/1:17,0:17:5.47:97,5,0	1/1:14,0:14:4.05:64,4,0	1/1:18,0:18:5.62:126,6,0	1/1:10,0:10:0.80:2,1,0	1/1:21,0:21:35.14:688,35,0	1/1:22,0:22:19.75:441,20,0	1/1:6,0:5:6.02:102,6,0
chr10	20955489	.	C	CCTAC	2181.31	PASS	AC=10;AF=0.185;AN=54;BaseQRankSum=-6.549;DP=542;FS=0.633;HRun=0;HaplotypeScore=175.9871;InbreedingCoeff=0.7578;MQ=53.90;MQ0=7;MQRankSum=4.167;QD=25.36;ReadPosRankSum=1.380;VQSLOD=3.6639;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	1/1:5,0:5:8.96:116,9,0	0/0:22,0:14:10.20:0,10,95	0/0:35,0:25:13.83:0,14,177	1/1:24,0:24:32.90:519,33,0	0/0:22,0:21:14.77:0,15,100	0/0:20,0:20:5.91:0,6,45	0/0:25,0:24:16.23:0,16,129	0/0:19,0:19:17.85:0,18,152	1/1:19,12:30:54.06:970,54,0	1/1:13,0:13:24:501,24,0	0/0:19,0:19:6.01:0,6,56	0/0:24,0:23:17.89:0,18,155	0/0:20,0:20:3.89:0,4,30	0/0:31,0:31:51.08:0,51,635	0/0:16,0:16:14.84:0,15,113	0/0:14,0:14:26.84:0,27,204	0/0:6,0:4:3:0,3,28	1/1:12,0:8:12.02:238,12,0	0/0:19,0:19:14.72:0,15,91	0/0:29,0:29:26.87:0,27,232	0/0:17,0:17:8.54:0,9,46	0/0:15,0:15:5.41:0,5,29	0/0:18,0:18:17.35:0,17,148	0/0:9,0:9:11.88:0,12,84	0/0:21,0:21:44.90:0,45,401	0/0:23,0:23:26.63:0,27,238	0/0:6,0:5:3:0,3,28
chr10	20956860	.	TG	T	1237.25	PASS	AB=0.887;AC=16;AF=0.296;AN=54;BaseQRankSum=2.759;DP=361;FS=0.563;HRun=11;HaplotypeScore=53.9280;InbreedingCoeff=0.0800;MQ=77.47;MQ0=0;MQRankSum=-0.003;QD=7.28;ReadPosRankSum=5.384;VQSLOD=1.2987;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:18.03:0,18,184	0/0:5,0:5:0:0,0,0	0/1:9,0:9:12.45:12,0,77	0/0:14,0:14:0.02:0,0,80	1/1:7,0:7:1.53:4,2,0	0/0:14,0:14:15.04:0,15,160	0/0:28,4:32:1.49:0,1,361	0/0:12,1:13:17.05:0,17,155	0/0:15,0:15:27:0,27,246	0/0:8,0:8:3.56:0,4,13	./.	0/0:13,0:13:27.02:0,27,260	0/1:10,1:11:9.86:10,0,105	0/1:14,4:19:51.89:52,0,92	0/1:13,1:14:26.18:26,0,97	1/1:5,9:15:1.11:153,1,0	1/1:3,20:24:61.97:498,62,0	1/1:9,23:34:46.98:570,47,0	0/0:1,0:2:2.84:0,3,14	0/1:5,1:6:15.57:16,0,55	0/0:13,0:13:9.02:0,9,96	0/1:5,1:6:15.55:16,0,55	0/0:6,0:6:8.93:0,9,65	0/1:18,2:20:19.21:19,0,226	0/0:5,0:5:12.03:0,12,127	0/0:17,0:17:6.02:0,6,64	0/0:14,0:14:15.02:0,15,152	0/1:4,1:5:12.65:13,0,73
chr10	20958371	.	G	GCA	9978.84	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=10.142;DP=794;FS=6.239;HRun=0;HaplotypeScore=106.3499;InbreedingCoeff=0.9998;MQ=75.75;MQ0=0;MQRankSum=-1.676;QD=45.57;ReadPosRankSum=0.753;VQSLOD=6.1184;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:58:99:0,160,2161	1/1:0,12:12:36.12:639,36,0	0/0:31,0:31:81.20:0,81,1046	0/0:29,0:30:75.18:0,75,963	1/1:2,17:19:51.17:905,51,0	0/0:28,0:28:69.23:0,69,943	0/0:28,0:28:81.24:0,81,1077	1/1:4,21:26:66.22:1135,66,0	0/0:31,0:31:89.86:0,90,1200	1/1:5,29:34:99:1684,99,0	1/1:1,15:16:42.14:745,42,0	0/0:42,0:42:99:0,120,1575	0/0:19,0:19:54.16:0,54,725	0/0:31,0:31:84.25:0,84,1120	0/0:26,0:26:78.26:0,78,1071	1/1:3,27:30:69.24:1222,69,0	1/1:3,23:26:60.21:1064,60,0	1/1:2,26:28:69.24:1223,69,0	1/1:4,23:28:78.27:1362,78,0	0/0:18,0:18:45.09:0,45,581	0/0:70,0:70:99:0,190,2561	0/0:24,0:24:66.22:0,66,907	0/0:16,0:16:45.15:0,45,617	0/0:32,0:32:96.30:0,96,1298	0/0:28,0:28:78.26:0,78,1070	0/0:33,0:33:99:0,99,1359	0/0:21,0:21:57.16:0,57,748	0/0:9,0:9:27.09:0,27,370
chr10	20958498	.	T	TAAACGGCTGAGGGGCC	10725.57	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=0.407;DP=685;FS=5.067;HRun=0;HaplotypeScore=285.5035;InbreedingCoeff=0.9878;MQ=83.53;MQ0=0;MQRankSum=-10.988;QD=151.06;ReadPosRankSum=2.488;VQSLOD=4.4150;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,126,5388	0/0:17,0:17:39.09:0,39,1369	0/0:18,0:18:15.12:0,15,660	0/0:24,0:24:24.53:0,25,933	0/0:22,0:22:48.16:0,48,2016	0/0:19,0:19:45.11:0,45,1753	0/0:27,0:27:66.23:0,66,2748	0/0:28,0:28:63.11:0,63,1788	0/0:24,0:24:51.18:0,51,2262	0/0:19,0:19:30.10:0,30,1288	0/0:9,0:9:15.05:0,15,580	0/0:34,0:34:87.28:0,87,3570	0/0:20,0:20:39.12:0,39,1547	0/0:46,0:46:99:0,117,4464	0/0:24,0:24:60.21:0,60,2565	1/1:14,10:25:63.22:4356,63,0	1/1:14,5:21:39.13:2942,39,0	1/1:16,7:25:48.16:3427,48,0	0/0:22,0:22:42.13:0,42,1587	0/0:22,0:22:51.16:0,51,1950	0/0:36,0:36:84.26:0,84,3243	0/0:19,0:19:43.35:0,43,1549	0/0:17,0:17:42.13:0,42,1582	0/0:33,0:33:87.30:0,87,3721	0/0:17,0:17:33.08:0,33,1194	0/0:26,0:26:63.17:0,63,2613	0/0:26,0:26:60.21:0,60,2502	0/0:12,0:12:36.12:0,36,1460
chr10	20959172	.	C	CAT	1936.65	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-2.370;DP=287;FS=0.000;HRun=0;HaplotypeScore=44.8193;InbreedingCoeff=0.7838;MQ=64.83;MQ0=3;MQRankSum=1.269;QD=24.21;ReadPosRankSum=-3.959;VQSLOD=2.3547;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:27.04:0,27,323	1/1:0,0:4:9:80,9,0	0/0:8,0:8:4.49:0,4,16	0/0:10,0:3:3.01:0,3,32	1/1:1,1:12:18.01:160,18,0	0/0:17,0:17:36.10:0,36,445	0/0:7,0:7:15.05:0,15,190	1/1:7,29:38:93.29:1460,93,0	0/0:4,0:4:6.02:0,6,76	1/1:4,0:13:26.93:252,27,0	1/1:3,0:4:3:27,3,0	0/0:8,0:8:15.05:0,15,191	0/0:6,0:6:18.06:0,18,229	0/0:13,0:13:33.11:0,33,419	0/0:3,0:3:6.02:0,6,76	0/0:7,0:7:15.05:0,15,191	0/0:15,0:15:45.12:0,45,556	0/0:13,0:13:30.10:0,30,380	1/1:3,0:7:15:131,15,0	0/0:13,0:13:15.03:0,15,178	0/0:8,0:8:18.04:0,18,215	0/0:2,0:2:6.01:0,6,63	0/0:3,0:3:6.02:0,6,75	0/0:5,0:5:9.02:0,9,101	0/0:13,0:13:30.10:0,30,381	0/0:7,0:7:15.05:0,15,191	0/0:10,0:10:27.09:0,27,344	0/0:21,0:21:57.18:0,57,725
chr10	20959877	.	A	ATGTGTG	2795.36	PASS	AB=0.838;AC=34;AF=0.680;AN=50;BaseQRankSum=-2.502;DP=776;FS=1.595;HRun=0;HaplotypeScore=178.8443;InbreedingCoeff=0.2228;MQ=51.97;MQ0=16;MQRankSum=-1.423;QD=5.42;ReadPosRankSum=-2.882;VQSLOD=2.0452;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:19,1:36:6.02:75,6,0	0/1:4,4:9:0:0,0,0	./.	./.	1/1:25,0:25:18.03:262,18,0	1/1:25,0:25:5.42:92,5,0	1/1:16,1:32:8.83:172,9,0	1/1:40,0:37:25.92:307,26,0	1/1:9,1:15:5.71:134,6,0	1/1:19,12:34:40.73:551,41,0	0/1:7,12:22:32.90:33,0,55	1/1:14,14:30:2.41:95,2,0	1/1:17,0:17:11.34:192,11,0	./.	0/1:26,0:25:15.86:16,0,358	0/1:24,0:26:65.59:66,0,372	0/0:26,0:26:34.51:0,35,573	0/1:26,0:26:8.09:8,0,375	1/1:14,9:23:32.92:452,33,0	0/0:8,11:20:1.39:0,1,3	1/1:29,0:29:11.67:189,12,0	0/0:14,12:26:1.41:0,1,2	1/1:18,0:18:6.01:62,6,0	1/1:14,14:30:1.99:89,2,0	1/1:18,0:18:5.92:69,6,0	0/1:25,0:34:55.02:72,0,55	0/0:17,0:31:7.93:0,8,141	0/0:6,0:13:0.89:0,1,2
chr10	20959906	.	T	TGTGT	2280.20	PASS	AB=1.000;AC=35;AF=0.700;AN=50;BaseQRankSum=-2.180;DP=690;FS=0.000;HRun=0;HaplotypeScore=133.8924;InbreedingCoeff=0.1975;MQ=51.80;MQ0=18;MQRankSum=0.304;QD=4.61;ReadPosRankSum=-3.834;VQSLOD=1.2062;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:38,0:38:6:108,6,0	0/0:9,0:9:0:0,0,0	./.	./.	1/1:19,0:19:18.03:238,18,0	1/1:25,0:25:5.51:93,6,0	1/1:35,0:35:6.02:142,6,0	1/1:31,0:28:22.69:132,23,0	1/1:13,0:13:6.02:123,6,0	1/1:33,0:32:37.12:429,37,0	0/1:24,0:24:39.97:65,0,40	1/1:29,0:29:4.97:58,5,0	1/1:19,0:18:9.03:134,9,0	./.	0/1:27,0:26:16.17:16,0,273	0/1:26,0:26:21.57:22,0,283	0/0:32,0:32:31.48:0,31,432	0/0:25,0:25:24:0,24,315	1/1:20,0:18:30.78:358,31,0	0/0:16,0:16:0.82:0,1,2	1/1:33,0:33:11.76:166,12,0	0/0:22,0:22:0.12:0,0,0	1/1:4,4:9:5.66:94,6,0	1/1:33,0:33:2.48:12,2,0	1/1:12,0:12:6.01:69,6,0	0/1:30,0:30:30.23:103,0,30	0/1:28,0:28:50:50,0,104	1/1:11,0:10:2.74:12,3,0
chr10	20968136	.	C	CTATGTATGTATG	14767.17	PASS	AB=0.648;AC=39;AF=0.750;AN=52;BaseQRankSum=-7.204;DP=830;FS=7.857;HRun=0;HaplotypeScore=285.6276;InbreedingCoeff=0.6232;MQ=68.85;MQ0=6;MQRankSum=-9.737;QD=23.26;ReadPosRankSum=-2.068;VQSLOD=2.5215;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:39:15.05:381,15,0	1/1:13,0:20:13.06:378,13,0	./.	./.	1/1:17,10:28:12.04:692,12,0	1/1:15,15:33:12.04:606,12,0	1/1:26,0:26:12.02:208,12,0	0/0:32,0:32:12.03:0,12,152	1/1:16,0:32:27.09:644,27,0	1/1:29,5:36:43.03:1848,43,0	1/1:15,8:26:27.09:1492,27,0	1/1:20,0:38:39.13:978,39,0	0/0:18,0:30:18.04:0,18,44	1/1:18,0:38:42.14:1064,42,0	0/0:23,0:23:45.14:0,45,1398	1/1:25,14:39:36.12:1988,36,0	1/1:22,0:22:12.04:422,12,0	1/1:18,0:18:23.96:556,24,0	1/1:19,0:21:9.89:159,10,0	0/1:17,0:31:51.09:107,0,51	0/0:12,0:31:21.67:0,22,50	1/1:24,12:37:30.10:1575,30,0	1/1:19,0:29:20.80:532,21,0	1/1:20,0:25:9.03:192,9,0	1/1:15,0:32:30.57:763,31,0	0/1:11,0:29:50.22:172,0,50	0/1:15,0:31:11.17:11,0,20	0/0:12,0:16:6.22:0,6,14
chr10	20970716	.	AAGAGAGAGAGAGAGAG	A	2122.28	PASS	AC=32;AF=0.640;AN=50;BaseQRankSum=4.317;DP=491;FS=31.107;HRun=0;HaplotypeScore=192.3683;InbreedingCoeff=0.5593;MQ=52.88;MQ0=11;MQRankSum=-1.004;QD=7.19;ReadPosRankSum=3.391;VQSLOD=1.3859;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:25,5:28:3.01:130,3,0	0/0:5,0:5:3.48:0,3,66	./.	./.	0/0:15,0:17:12.04:0,12,362	1/1:14,0:14:2.99:23,3,0	1/1:20,1:22:8.99:257,9,0	0/0:25,0:24:15.94:0,16,475	1/1:17,0:17:2.99:24,3,0	0/0:23,0:21:21.07:0,21,727	0/0:13,0:14:2.67:0,3,28	1/1:24,1:27:9.03:354,9,0	1/1:11,0:11:3.01:112,3,0	1/1:22,0:22:3:25,3,0	0/0:20,0:27:27.04:0,27,717	1/1:11,0:15:6.02:223,6,0	1/1:17,0:17:4.26:115,4,0	1/1:11,0:13:6.02:223,6,0	0/0:11,0:11:14.84:0,15,418	0/0:11,0:11:0:0,0,0	1/1:29,0:29:6.45:48,6,0	1/1:11,1:12:3.01:120,3,0	./.	1/1:19,6:24:8.62:193,9,0	1/1:19,0:19:3.01:46,3,0	0/0:19,0:19:9.13:0,9,233	1/1:11,4:15:5.96:261,6,0	1/1:4,1:5:3.01:130,3,0
chr10	20972703	.	TGCTTGG	T	18243.05	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=10.015;DP=512;FS=13.685;HRun=0;HaplotypeScore=122.3315;InbreedingCoeff=0.9960;MQ=82.34;MQ0=0;MQRankSum=-15.433;QD=50.96;ReadPosRankSum=0.431;VQSLOD=4.4608;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,17:20:21.07:456,21,0	0/0:13,0:13:39.13:0,39,1300	0/0:23,0:23:63.17:0,63,1753	0/0:18,0:18:48.03:0,48,1353	0/0:17,0:17:51.18:0,51,1762	1/1:1,12:13:33.11:769,33,0	1/1:0,18:18:45.15:1046,45,0	1/1:1,20:21:60.14:1268,60,0	1/1:0,19:19:51.18:1188,51,0	0/0:25,0:25:66.22:0,66,2220	0/0:16,0:16:42.14:0,42,1404	1/1:0,16:16:36.12:838,36,0	1/1:2,16:18:42.14:978,42,0	1/1:2,18:20:42.14:976,42,0	0/0:23,0:23:66.20:0,66,2158	1/1:0,17:17:45.15:1048,45,0	1/1:1,22:23:45.15:1048,45,0	1/1:2,17:19:30.10:699,30,0	0/0:19,0:19:51.17:0,51,1700	1/1:2,20:22:57.14:1276,57,0	1/1:2,18:20:36.08:788,36,0	1/1:0,14:14:33.07:718,33,0	1/1:2,17:19:38.73:858,39,0	1/1:1,16:17:24.08:527,24,0	1/1:1,12:13:30.10:699,30,0	1/1:0,25:25:75.24:1666,75,0	1/1:0,19:19:45.15:1046,45,0	1/1:0,5:5:15.05:350,15,0
chr10	20972902	.	A	AG	1110.06	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-3.237;DP=485;FS=9.133;HRun=6;HaplotypeScore=57.3331;InbreedingCoeff=0.9008;MQ=82.16;MQ0=0;MQRankSum=-0.205;QD=29.21;ReadPosRankSum=-1.746;VQSLOD=3.2843;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:63.13:0,63,642	1/1:0,2:2:6.02:75,6,0	0/0:17,0:16:32.18:0,32,338	0/0:21,0:21:25.67:0,26,365	1/1:1,8:9:24.08:300,24,0	0/0:16,0:16:45.10:0,45,458	0/0:31,0:31:81.14:0,81,814	0/0:22,0:22:45.09:0,45,453	0/0:21,0:21:60.01:0,60,580	1/1:0,9:9:27.09:340,27,0	1/1:0,4:4:6.02:75,6,0	0/0:30,0:30:81.16:0,81,813	0/0:24,0:24:51.11:0,51,519	0/0:28,0:28:68.18:0,68,676	0/0:28,0:28:78.14:0,78,786	0/0:11,0:11:30.07:0,30,306	0/0:24,0:24:69.16:0,69,703	0/0:35,0:35:84.18:0,84,857	1/1:1,13:14:42.07:482,42,0	0/0:8,0:8:24.05:0,24,242	0/0:30,0:30:84.19:0,84,857	0/0:1,0:1:3.01:0,3,31	0/0:7,0:7:21.05:0,21,214	0/0:14,0:14:33.07:0,33,335	0/0:15,0:15:39.09:0,39,397	0/0:20,0:20:54.10:0,54,540	0/0:13,0:13:33.07:0,33,336	0/0:5,0:5:12.03:0,12,122
chr10	20973135	.	AT	A	1281.37	PASS	AC=6;AF=0.111;AN=54;BaseQRankSum=6.952;DP=302;FS=7.953;HRun=8;HaplotypeScore=31.9800;InbreedingCoeff=0.6950;MQ=71.44;MQ0=0;MQRankSum=0.623;QD=20.02;ReadPosRankSum=3.013;VQSLOD=2.5908;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:72.21:0,72,858	0/0:7,0:7:21.06:0,21,254	0/0:17,0:8:17.29:0,17,135	0/0:14,0:9:12.20:0,12,123	0/0:7,0:7:21.06:0,21,253	0/0:20,0:20:60.13:0,60,696	./.	0/0:32,0:32:87.25:0,87,1030	0/0:9,1:10:1.10:0,1,284	0/0:5,0:5:15.05:0,15,181	0/0:6,0:6:15.03:0,15,170	0/0:4,0:4:12.04:0,12,144	0/0:3,0:3:6.02:0,6,72	0/0:9,0:9:21.04:0,21,230	0/0:3,0:3:9.03:0,9,109	1/1:0,8:8:24.04:232,24,0	1/1:5,26:31:72.11:695,72,0	1/1:3,22:25:51.08:493,51,0	0/0:20,0:20:54.17:0,54,651	0/0:7,0:7:15.04:0,15,177	0/0:3,0:3:6.02:0,6,72	0/0:1,0:1:3:0,3,26	0/0:3,0:3:9.03:0,9,109	0/0:1,0:1:3.01:0,3,36	0/0:11,0:11:30.09:0,30,357	0/0:17,0:17:48.14:0,48,569	0/0:10,0:10:21.06:0,21,254	0/0:3,0:3:9.03:0,9,108
chr10	20977101	.	CG	C	847.90	PASS	AC=34;AF=0.850;AN=40;BaseQRankSum=5.928;DP=94;FS=16.802;HRun=2;HaplotypeScore=19.4094;InbreedingCoeff=0.4471;MQ=110.67;MQ0=1;MQRankSum=-0.605;QD=22.31;ReadPosRankSum=-4.245;VQSLOD=0.9588;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	1/1:3,1:4:3:29,3,0	0/0:18,0:17:45.13:0,45,633	0/0:15,0:12:16.13:0,16,357	1/1:1,0:1:3.01:38,3,0	1/1:1,1:2:3.01:38,3,0	1/1:0,4:4:9.01:88,9,0	1/1:0,0:4:9.01:90,9,0	1/1:1,0:1:3.01:38,3,0	1/1:0,1:1:3.01:38,3,0	1/1:0,2:2:5.93:55,6,0	1/1:3,0:3:9.02:105,9,0	./.	1/1:0,1:1:3.01:38,3,0	0/0:20,0:20:60.17:0,60,841	./.	1/1:0,3:3:3:29,3,0	./.	1/1:0,3:3:9:88,9,0	1/1:1,0:1:3.01:38,3,0	1/1:2,0:2:6:53,6,0	1/1:1,0:1:3.01:38,3,0	1/1:3,0:3:9.01:99,9,0	./.	./.	./.	1/1:1,1:2:6.02:72,6,0	./.
chr10	20977727	.	A	AAAAG	12362.46	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=0.128;DP=403;FS=48.670;HRun=0;HaplotypeScore=118.9144;InbreedingCoeff=0.9033;MQ=67.14;MQ0=0;MQRankSum=-10.617;QD=43.68;ReadPosRankSum=-3.372;VQSLOD=2.3779;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,13:18:42.14:1058,42,0	1/1:1,2:3:9.03:213,9,0	0/0:13,0:12:20.83:0,21,266	0/0:21,0:20:27.39:0,27,412	1/1:12,5:17:18.06:426,18,0	1/1:8,3:11:18.06:357,18,0	1/1:6,5:11:15.05:376,15,0	1/1:16,11:26:42.14:990,42,0	1/1:7,10:17:36.11:848,36,0	1/1:8,6:14:24.02:486,24,0	1/1:2,11:13:33.11:825,33,0	1/1:5,10:15:39.12:804,39,0	1/1:9,4:13:15.05:367,15,0	1/1:1,4:5:12.04:277,12,0	0/0:11,0:11:30.10:0,30,512	0/0:23,0:23:63.20:0,63,1063	0/0:25,0:25:69.24:0,69,1189	0/0:27,0:27:72.21:0,72,1214	1/1:5,8:13:24.08:605,24,0	1/1:5,5:10:27.09:569,27,0	1/1:2,2:4:3.01:54,3,0	1/1:6,6:12:27.09:587,27,0	1/1:7,8:15:30.10:684,30,0	1/1:12,6:18:33.11:757,33,0	1/1:7,12:19:39.13:880,39,0	1/1:3,5:8:21.07:457,21,0	1/1:9,7:16:30.10:670,30,0	1/1:2,2:4:3.01:69,3,0
chr10	20977748	.	GAAAT	G	4852.80	PASS	AB=0.963;AC=35;AF=0.648;AN=54;BaseQRankSum=1.511;DP=360;FS=19.833;HRun=0;HaplotypeScore=142.4673;InbreedingCoeff=0.3247;MQ=52.64;MQ0=9;MQRankSum=-4.819;QD=16.73;ReadPosRankSum=-2.280;VQSLOD=2.7851;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:21,0:20:33.57:66,0,34	0/0:6,0:6:7.25:0,7,65	0/0:17,0:9:5.10:0,5,171	0/0:14,0:10:3.99:0,4,197	0/0:8,0:8:20.01:0,20,176	1/1:3,5:7:17.99:256,18,0	1/1:6,1:7:8.96:99,9,0	1/1:18,0:17:35.14:285,35,0	0/1:15,0:15:19.44:57,0,19	0/0:10,0:10:4.71:0,5,129	0/1:13,0:12:8.55:9,0,104	1/1:8,9:17:47.59:497,48,0	1/1:1,3:4:11.97:148,12,0	1/1:1,3:4:9.03:114,9,0	0/0:12,0:12:35.98:0,36,620	0/1:22,3:25:99:136,0,391	0/1:25,1:26:99:142,0,334	0/1:26,4:30:99:193,0,418	0/1:7,0:6:27.52:28,0,58	1/1:2,8:10:23.86:300,24,0	./.	1/1:3,9:11:32.93:415,33,0	1/1:6,6:11:26.85:299,27,0	1/1:8,6:14:20.98:261,21,0	1/1:7,13:20:56.65:623,57,0	1/1:4,7:11:33.02:452,33,0	1/1:6,6:11:26.93:340,27,0	1/1:0,4:4:9.03:135,9,0
chr10	20977782	.	AAG	A	5565.20	PASS	AB=0.749;AC=36;AF=0.667;AN=54;BaseQRankSum=1.366;DP=344;FS=11.767;HRun=0;HaplotypeScore=116.5253;InbreedingCoeff=0.5075;MQ=51.98;MQ0=15;MQRankSum=-5.570;QD=23.19;ReadPosRankSum=1.690;VQSLOD=4.9905;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:4,13:16:7.24:320,0,7	0/1:6,2:8:10.05:89,0,10	0/0:14,0:6:11.93:0,12,154	0/0:13,0:6:7.20:0,7,139	0/1:9,6:13:16.54:218,0,17	1/1:0,8:6:18.05:212,18,0	1/1:7,1:6:9.02:98,9,0	1/1:3,14:15:39.08:491,39,0	1/1:2,9:11:30.10:388,30,0	0/1:11,1:12:3.70:102,0,4	0/1:7,5:9:21.27:98,0,21	1/1:3,12:15:36.11:445,36,0	1/1:0,6:5:15.05:189,15,0	1/1:0,3:3:9.03:113,9,0	0/0:13,0:13:39.13:0,39,653	0/0:21,0:21:46.37:0,46,782	0/0:16,0:16:39.55:0,40,597	0/0:25,0:25:52.41:0,52,915	0/1:8,3:8:9.22:9,0,25	1/1:2,9:10:24.07:287,24,0	./.	1/1:2,9:10:27.08:324,27,0	1/1:2,6:6:18.06:226,18,0	1/1:9,6:15:30.09:367,30,0	1/1:6,15:21:54.16:661,54,0	1/1:5,9:14:33.10:405,33,0	1/1:3,7:8:24.07:294,24,0	1/1:0,7:7:18.06:229,18,0
chr10	20977784	.	G	GAAAGA	1309.37	PASS	AB=0.882;AC=19;AF=0.339;AN=56;BaseQRankSum=-0.815;DP=335;FS=11.650;HRun=0;HaplotypeScore=147.6837;InbreedingCoeff=0.2586;MQ=52.34;MQ0=15;MQRankSum=-2.312;QD=8.39;ReadPosRankSum=-3.320;VQSLOD=1.1686;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:16,0:16:5.60:6,0,219	1/1:2,0:8:14.46:173,14,0	0/0:12,0:6:11.41:0,11,151	0/0:13,0:6:10.85:0,11,160	1/1:7,0:13:25.73:412,26,0	0/0:8,0:6:15.41:0,15,135	0/1:1,0:5:9.50:21,0,10	0/1:15,0:14:4.03:19,0,4	0/0:10,0:11:2.57:0,3,210	1/1:2,1:12:25.75:351,26,0	1/1:8,0:9:23.04:295,23,0	0/1:14,0:14:17.70:18,0,183	0/1:6,0:5:6.96:7,0,84	0/0:3,0:3:8.98:0,9,87	0/0:13,0:13:39.13:0,39,767	0/0:20,0:20:60:0,60,1024	0/0:16,0:16:45.10:0,45,811	0/0:23,0:23:66.09:0,66,1151	0/1:11,0:9:23.61:127,0,24	0/1:10,0:11:8.10:8,0,122	1/1:1,0:2:2.80:13,3,0	0/0:9,0:9:26.79:0,27,237	0/0:6,0:6:15.86:0,16,116	0/1:9,0:14:30.34:30,0,57	0/0:16,0:20:0.15:0,0,278	0/0:9,0:12:7.57:0,8,132	0/0:7,0:8:8.51:0,9,129	0/1:9,0:9:0.25:0,0,50
chr10	20977833	.	AATT	A	245.64	PASS	AC=6;AF=0.125;AN=48;BaseQRankSum=2.205;DP=259;FS=0.000;HRun=0;HaplotypeScore=100.9812;InbreedingCoeff=0.6823;MQ=73.86;MQ0=15;MQRankSum=-1.092;QD=6.14;ReadPosRankSum=-0.823;VQSLOD=2.4896;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:5:12.02:0,12,146	0/0:7,0:7:7.65:0,8,88	0/0:17,0:13:19.95:0,20,149	0/0:22,0:8:4.56:0,5,46	0/0:13,0:11:22.05:0,22,231	0/0:7,0:5:9.03:0,9,127	./.	0/0:35,0:34:81.13:0,81,1075	0/0:4,0:4:6.02:0,6,91	0/0:4,0:4:6.02:0,6,99	0/0:7,0:4:10.28:0,10,136	0/0:6,0:6:11.99:0,12,128	0/0:5,0:4:11.95:0,12,121	0/0:2,0:2:3.01:0,3,44	0/0:8,0:8:21.05:0,21,359	1/1:8,1:9:11.46:74,11,0	1/1:11,1:12:15.52:100,16,0	1/1:16,3:19:25.75:202,26,0	0/0:10,0:9:15.04:0,15,217	0/0:8,0:7:12.04:0,12,156	./.	./.	./.	0/0:4,0:4:5.99:0,6,59	0/0:13,0:13:30.09:0,30,428	0/0:10,0:10:12.03:0,12,156	0/0:8,0:6:9.03:0,9,132	0/0:10,0:10:29.86:0,30,292
chr10	20977844	.	T	TTAATAA	3437.94	PASS	AB=1.000;AC=41;AF=0.854;AN=48;BaseQRankSum=-1.583;DP=244;FS=3.410;HRun=0;HaplotypeScore=108.6395;InbreedingCoeff=0.2927;MQ=73.66;MQ0=14;MQRankSum=-2.726;QD=15.92;ReadPosRankSum=2.080;VQSLOD=3.0757;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,1:4:9.03:203,9,0	1/1:5,0:5:11.99:124,12,0	0/0:15,0:9:2.87:0,3,35	0/1:54,0:22:0.98:1,0,101	1/1:11,0:9:17.84:193,18,0	1/1:5,0:3:9.01:142,9,0	./.	1/1:37,0:36:72.30:840,72,0	1/1:3,0:3:4.83:44,5,0	1/1:3,0:3:3.01:39,3,0	1/1:5,0:4:11.73:88,12,0	1/1:4,0:4:2.22:7,2,0	1/1:6,0:5:10.85:168,11,0	1/1:0,1:1:3.01:102,3,0	0/0:8,0:8:15.03:0,15,272	1/1:5,0:5:5.91:44,6,0	1/1:9,0:9:4.76:150,5,0	0/1:13,0:13:25.74:157,0,26	1/1:7,0:6:11.98:128,12,0	1/1:6,0:5:10.52:64,11,0	./.	./.	./.	0/1:4,0:4:29.71:33,0,30	1/1:8,2:10:20.93:379,21,0	1/1:4,1:5:5.98:122,6,0	1/1:6,0:4:7.42:98,7,0	1/1:12,0:12:25.72:313,26,0
chr10	20977853	.	AT	A	3233.06	PASS	AB=0.783;AC=40;AF=0.833;AN=48;BaseQRankSum=0.546;DP=204;FS=2.858;HRun=2;HaplotypeScore=81.8915;InbreedingCoeff=0.2160;MQ=71.08;MQ0=8;MQRankSum=-0.060;QD=22.93;ReadPosRankSum=3.826;VQSLOD=3.7612;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,2:3:9.02:102,9,0	1/1:1,4:5:12.03:136,12,0	0/1:11,0:5:6.87:7,0,43	0/0:57,0:24:7.73:0,8,200	1/1:4,9:11:3.26:182,3,0	1/1:2,2:3:9.01:102,9,0	./.	0/1:15,15:29:99:583,0,264	1/1:0,2:2:6.02:78,6,0	1/1:1,1:2:3.01:39,3,0	1/1:2,3:4:11.97:113,12,0	1/1:0,1:1:3.01:39,3,0	1/1:2,4:5:14.08:160,14,0	1/1:1,0:1:2.99:23,3,0	0/0:5,0:5:15.03:0,15,204	1/1:1,1:3:8.60:72,9,0	1/1:0,7:8:24.07:292,24,0	1/1:1,7:11:30.04:337,30,0	0/1:3,2:5:10.35:102,0,10	1/1:0,4:4:12.04:155,12,0	./.	./.	./.	1/1:1,1:2:3.01:39,3,0	1/1:3,6:9:24.04:279,24,0	0/1:2,1:3:10.67:52,0,11	1/1:0,3:3:9.03:116,9,0	1/1:1,9:10:29.99:366,30,0
chr10	20977860	.	AT	A	801.64	PASS	AB=0.934;AC=19;AF=0.396;AN=48;BaseQRankSum=0.612;DP=195;FS=7.756;HRun=2;HaplotypeScore=93.0463;InbreedingCoeff=0.0337;MQ=69.13;MQ0=5;MQRankSum=-0.657;QD=7.63;ReadPosRankSum=1.706;VQSLOD=0.7444;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:3,0:3:3.18:3,0,27	1/1:4,0:4:5.36:21,5,0	0/0:11,0:5:11.74:0,12,99	0/0:56,0:23:35.60:0,36,367	0/1:10,2:12:23.31:73,0,23	0/0:2,0:2:5.93:0,6,40	./.	0/1:28,0:27:99:146,0,339	0/1:2,0:2:8.68:9,0,14	0/0:1,0:1:3.01:0,3,35	0/1:3,0:3:20.31:24,0,20	0/0:1,0:1:3:0,3,28	0/0:4,0:4:0.24:0,0,43	1/1:1,0:1:2.74:12,3,0	0/0:4,0:4:12.04:0,12,180	1/1:2,1:3:2.26:40,2,0	1/1:5,6:11:27.76:284,28,0	1/1:3,6:9:20.56:192,21,0	0/1:4,2:6:13.25:86,0,13	0/0:4,0:4:12.02:0,12,122	./.	./.	./.	0/0:2,0:2:2.87:0,3,29	0/1:9,0:9:14.13:14,0,126	0/1:3,1:4:28.05:41,0,28	0/0:3,0:3:4.49:0,4,56	0/1:10,0:10:3.01:3,0,159
chr10	20977861	.	T	TAA	2044.99	PASS	AB=0.880;AC=25;AF=0.521;AN=48;BaseQRankSum=-1.590;DP=204;FS=8.646;HRun=2;HaplotypeScore=101.9059;InbreedingCoeff=-0.1036;MQ=67.67;MQ0=5;MQRankSum=-2.640;QD=16.76;ReadPosRankSum=4.090;VQSLOD=0.8436;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:3,1:4:8.83:72,0,9	1/1:4,0:4:4.53:15,5,0	0/0:11,0:5:12.79:0,13,111	0/0:56,0:23:33.65:0,34,317	1/1:11,0:13:5.46:107,5,0	1/1:2,0:2:5.81:34,6,0	./.	0/1:13,14:26:99:619,0,279	0/1:2,0:2:13.63:20,0,14	0/1:4,0:4:13.92:14,0,29	1/1:3,0:5:7.77:66,8,0	0/0:2,0:2:3.01:0,3,34	0/1:3,1:4:34.92:65,0,35	1/1:0,1:1:3.01:61,3,0	0/0:4,0:4:12.04:0,12,190	0/1:3,0:3:17.19:47,0,17	1/1:10,1:11:0.97:340,1,0	1/1:9,0:9:14.95:228,15,0	0/1:5,0:6:17:60,0,17	0/0:4,0:4:11.24:0,11,96	./.	./.	./.	0/0:1,1:2:2.84:0,3,29	0/1:7,2:9:77.64:185,0,78	0/1:4,1:5:23.96:99,0,24	0/1:3,0:3:32.79:33,0,57	0/1:9,1:10:99:133,0,136
chr10	20977870	.	AT	A	1445.74	PASS	AB=0.891;AC=29;AF=0.604;AN=48;BaseQRankSum=3.783;DP=203;FS=0.756;HRun=2;HaplotypeScore=103.1788;InbreedingCoeff=0.5115;MQ=71.90;MQ0=5;MQRankSum=-0.125;QD=15.06;ReadPosRankSum=2.795;VQSLOD=3.6488;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,1:4:3.90:41,4,0	0/0:1,2:3:1.36:0,1,3	0/0:11,0:6:8.30:0,8,60	0/0:55,0:25:5.56:0,6,225	0/0:8,2:10:2.70:0,3,134	1/1:2,1:3:6:78,6,0	./.	0/1:21,5:25:99:137,0,556	1/1:0,1:1:2.98:21,3,0	0/0:3,0:3:6.02:0,6,90	0/0:7,1:8:11.05:0,11,89	1/1:2,1:3:2.95:20,3,0	1/1:3,2:5:11.96:106,12,0	1/1:1,0:1:2.88:15,3,0	0/0:3,0:3:9.03:0,9,132	1/1:0,3:3:8.96:93,9,0	1/1:0,10:10:29.70:277,30,0	1/1:1,7:8:23.81:219,24,0	0/0:7,0:7:20.50:0,20,226	1/1:0,4:4:11.92:100,12,0	./.	./.	./.	0/1:1,0:1:0:0,0,0	1/1:5,5:10:17.88:196,18,0	0/1:4,1:5:27.17:27,0,40	1/1:1,2:3:8.93:67,9,0	1/1:2,7:9:23.93:211,24,0
chr10	20977881	.	TAATAGAA	T	1189.31	PASS	AB=0.947;AC=31;AF=0.646;AN=48;BaseQRankSum=5.116;DP=172;FS=3.243;HRun=0;HaplotypeScore=105.6128;InbreedingCoeff=0.1466;MQ=61.67;MQ0=4;MQRankSum=2.248;QD=9.08;ReadPosRankSum=2.011;VQSLOD=2.0817;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:5,0:5:27.88:38,0,28	1/1:2,2:4:3.91:122,4,0	./.	0/1:30,0:17:23.28:64,0,23	0/1:9,2:11:47.05:97,0,47	1/1:4,0:4:6.65:25,7,0	./.	0/0:21,0:21:14.23:0,14,516	0/1:2,0:2:2.02:2,0,7	0/0:3,0:3:8.06:0,8,83	0/1:7,1:8:58.23:58,0,65	0/0:3,0:3:0.21:0,0,5	1/1:6,0:6:3.09:28,3,0	1/1:1,0:1:2.04:6,2,0	0/0:1,0:1:3.01:0,3,119	1/1:3,0:3:9.02:121,9,0	1/1:5,0:5:14.84:166,15,0	1/1:6,0:6:18.05:310,18,0	0/0:7,0:7:14.64:0,15,136	1/1:4,0:4:6.63:21,7,0	./.	1/1:4,0:4:5.61:47,6,0	1/1:8,0:8:1.43:54,1,0	./.	0/1:7,0:7:13.77:17,0,14	0/1:7,0:7:20.09:33,0,20	1/1:3,0:3:7.18:35,7,0	1/1:8,0:8:16.19:96,16,0
chr10	20977884	.	TAGAA	T	1736.05	PASS	AB=0.939;AC=37;AF=0.771;AN=48;BaseQRankSum=6.170;DP=164;FS=2.072;HRun=0;HaplotypeScore=93.6501;InbreedingCoeff=0.0980;MQ=60.05;MQ0=3;MQRankSum=-0.431;QD=11.42;ReadPosRankSum=1.565;VQSLOD=2.9841;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:5,0:5:16.13:45,0,16	1/1:4,0:4:11.68:100,12,0	./.	0/1:26,0:15:47.74:57,0,48	0/1:11,0:11:50.18:58,0,50	1/1:4,0:4:2.39:14,2,0	./.	0/1:21,0:21:17.71:18,0,470	0/1:1,1:2:2.22:23,0,2	0/1:3,0:3:4.30:4,0,50	0/1:8,0:8:45.28:54,0,45	1/1:2,1:3:8.28:48,8,0	1/1:4,1:6:11.49:76,11,0	1/1:1,0:1:2.99:23,3,0	0/0:2,0:2:6.02:0,6,159	1/1:2,1:3:9.03:148,9,0	1/1:4,1:5:15.05:225,15,0	1/1:3,3:6:18.06:304,18,0	0/0:5,0:5:14.74:0,15,131	1/1:1,3:4:9.01:85,9,0	./.	1/1:4,0:4:5.69:48,6,0	1/1:8,0:8:8.18:70,8,0	./.	1/1:5,2:7:14.59:86,15,0	1/1:6,1:7:10.11:103,10,0	1/1:1,2:3:8.99:78,9,0	1/1:2,6:8:23.85:212,24,0
chr10	20977889	.	AATAATAATAAAAT	A	7289.60	PASS	AB=1.000;AC=45;AF=0.900;AN=50;BaseQRankSum=2.266;DP=146;FS=11.121;HRun=0;HaplotypeScore=103.4758;InbreedingCoeff=0.4176;MQ=69.84;MQ0=0;MQRankSum=-3.377;QD=51.70;ReadPosRankSum=0.981;VQSLOD=3.4961;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,0:2:6.02:188,6,0	1/1:4,1:5:15.05:453,15,0	0/0:3,0:3:6.02:0,6,167	0/1:16,0:12:18.59:19,0,103	1/1:4,5:9:15.05:357,15,0	1/1:2,1:3:9.03:214,9,0	1/1:2,0:2:3.01:60,3,0	1/1:5,4:9:27.09:756,27,0	1/1:3,0:3:9.03:224,9,0	1/1:4,1:5:15.05:335,15,0	1/1:6,3:9:27.09:575,27,0	1/1:3,2:5:15.04:330,15,0	1/1:2,4:6:1.19:199,1,0	./.	0/0:2,0:2:6.02:0,6,330	1/1:3,1:4:12.04:283,12,0	1/1:4,1:5:15.05:271,15,0	1/1:3,3:6:11.31:472,11,0	1/1:4,0:4:12.04:208,12,0	1/1:6,0:6:18.03:233,18,0	./.	1/1:0,4:4:6.02:181,6,0	1/1:2,8:10:15.05:386,15,0	./.	1/1:4,1:5:12.04:356,12,0	1/1:6,2:8:19.78:563,20,0	1/1:4,0:4:12.01:133,12,0	1/1:10,1:11:17.20:493,17,0
chr10	20977904	.	A	AACC	4975.94	PASS	AB=0.800;AC=45;AF=0.900;AN=50;BaseQRankSum=5.712;DP=164;FS=0.000;HRun=0;HaplotypeScore=90.4410;InbreedingCoeff=0.6371;MQ=81.00;MQ0=0;MQRankSum=-5.900;QD=33.62;ReadPosRankSum=3.497;VQSLOD=4.9770;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,1:2:6.02:77,6,0	1/1:4,1:5:14.99:176,15,0	0/0:11,0:11:21:0,21,309	0/1:3,0:4:3.48:3,0,109	1/1:9,0:9:14.26:103,14,0	1/1:3,1:4:12.04:185,12,0	1/1:0,2:2:3.01:57,3,0	1/1:9,3:12:33.11:524,33,0	1/1:3,1:4:9.03:138,9,0	1/1:4,2:6:18.04:277,18,0	1/1:9,1:10:30.01:368,30,0	1/1:3,2:6:14.85:207,15,0	1/1:5,0:5:9.01:124,9,0	./.	0/0:5,0:5:15.04:0,15,248	1/1:4,1:5:15.05:296,15,0	1/1:6,0:6:14.98:205,15,0	1/1:9,0:9:23.98:315,24,0	1/1:4,1:5:14.95:196,15,0	1/1:5,2:7:21.03:260,21,0	./.	1/1:4,0:4:6.02:73,6,0	1/1:8,2:10:15.05:249,15,0	./.	1/1:5,2:7:12.04:213,12,0	1/1:7,1:8:24.04:319,24,0	1/1:7,0:7:15.03:168,15,0	1/1:11,0:11:33.09:440,33,0
chr10	20978326	.	T	TTCTTTC	7036.82	PASS	AB=1.000;AC=39;AF=0.696;AN=56;BaseQRankSum=3.835;DP=624;FS=5.252;HRun=0;HaplotypeScore=189.0292;InbreedingCoeff=0.1702;MQ=55.87;MQ0=10;MQRankSum=-4.832;QD=13.69;ReadPosRankSum=-3.442;VQSLOD=3.5890;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:16:5.96:43,6,0	0/1:13,0:11:18.74:150,0,19	0/0:26,0:13:20.09:0,20,203	0/0:35,0:17:23.26:0,23,225	0/1:16,0:14:16.31:16,0,27	1/1:35,0:34:20.93:369,21,0	1/1:23,0:20:35.85:337,36,0	1/1:43,0:41:99:1126,106,0	1/1:31,0:30:50.04:513,50,0	0/1:20,0:20:84.23:137,0,84	0/1:15,0:14:17.24:20,0,17	1/1:4,13:17:8.78:135,9,0	1/1:23,0:22:53.64:635,54,0	1/1:19,0:19:6.02:109,6,0	0/0:27,0:27:75.08:0,75,1134	0/1:24,0:24:99:306,0,100	0/1:18,0:18:16.94:119,0,17	0/1:17,0:17:78.68:79,0,127	0/1:21,0:20:99:121,0,239	1/1:24,0:24:37.27:357,37,0	0/1:23,0:22:31.03:327,0,31	1/1:23,0:23:44.68:422,45,0	1/1:12,0:11:8.98:92,9,0	0/0:6,12:22:2.90:0,3,34	1/1:18,0:16:35.81:377,36,0	1/1:19,0:19:53.79:534,54,0	1/1:10,14:25:26.22:410,26,0	1/1:15,0:12:30.36:304,30,0
chr10	20978328	.	C	CTT	4205.44	PASS	AB=0.953;AC=34;AF=0.607;AN=56;BaseQRankSum=1.740;DP=630;FS=1.953;HRun=2;HaplotypeScore=175.9811;InbreedingCoeff=0.3735;MQ=52.49;MQ0=11;MQRankSum=-2.156;QD=8.97;ReadPosRankSum=0.127;VQSLOD=0.3604;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:8,10:17:13.05:13,0,20	0/1:13,0:11:32.34:32,0,51	0/0:25,0:11:26.50:0,27,245	0/0:37,0:16:10.33:0,10,251	0/0:16,0:14:11.50:0,11,89	1/1:15,20:34:9.41:119,9,0	1/1:24,0:21:27.80:302,28,0	1/1:43,0:41:51.09:692,51,0	1/1:31,0:30:1.44:336,1,0	0/1:21,0:21:65.46:65,0,216	0/1:14,0:13:1.68:2,0,43	0/1:18,0:17:0.65:70,0,1	1/1:22,0:21:41.35:424,41,0	1/1:6,11:18:1.97:5,2,0	0/0:28,0:28:75.06:0,75,845	0/1:25,0:25:84.18:84,0,165	0/1:22,0:22:34.14:34,0,72	0/0:16,0:16:18.40:0,18,175	0/0:20,0:19:27.93:0,28,331	1/1:25,0:25:33.63:342,34,0	1/1:22,1:22:14.18:310,14,0	1/1:23,0:23:16.11:266,16,0	1/1:11,0:10:8.94:68,9,0	0/0:19,0:19:5.63:0,6,36	1/1:19,0:17:36.27:326,36,0	1/1:3,15:18:40.47:430,40,0	0/1:27,0:27:26.62:110,0,27	1/1:16,0:12:21.48:173,21,0
chr10	20978348	.	C	CTCTCTCTCTCTCTT	6893.25	PASS	AB=0.981;AC=27;AF=0.482;AN=56;BaseQRankSum=6.305;DP=619;FS=27.104;HRun=0;HaplotypeScore=212.9240;InbreedingCoeff=-0.6639;MQ=46.50;MQ0=16;MQRankSum=-6.434;QD=12.33;ReadPosRankSum=2.732;VQSLOD=2.4819;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:16:13.28:0,13,100	0/1:13,0:11:37.94:254,0,38	0/1:34,0:12:25.75:26,0,84	0/1:35,0:11:9.89:10,0,58	0/1:22,0:20:99:120,0,138	0/1:32,0:31:99:158,0,109	0/1:20,0:17:88.79:89,0,118	0/1:38,0:35:99:535,0,206	0/1:30,0:29:99:130,0,178	0/1:22,0:22:99:782,0,128	0/1:16,0:15:98.72:235,0,99	0/1:15,0:14:52.23:52,0,96	0/1:22,0:21:72.96:240,0,73	0/1:17,0:16:52.88:134,0,53	0/0:22,0:22:54.54:0,55,1212	1/1:21,3:24:59.92:1636,60,0	1/1:12,0:28:26.86:657,27,0	0/1:4,10:19:68.84:546,0,69	0/1:17,0:16:99:342,0,138	0/1:27,0:27:64.01:64,0,154	0/1:22,0:20:44.36:181,0,44	0/1:20,0:20:11.41:11,0,100	0/1:12,0:11:27.10:27,0,83	0/0:18,0:18:1.73:0,2,57	0/1:22,0:20:94.51:173,0,95	0/1:17,0:16:99:319,0,108	0/1:20,0:20:80.13:80,0,156	0/1:14,0:9:24.24:92,0,24
chr10	20978882	.	G	GT	31222.78	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-12.067;DP=834;FS=2.245;HRun=0;HaplotypeScore=78.8435;InbreedingCoeff=0.9992;MQ=87.62;MQ0=0;MQRankSum=-11.162;QD=42.89;ReadPosRankSum=6.476;VQSLOD=4.8839;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,51:51:99:2155,135,0	1/1:0,9:9:24.08:375,24,0	0/0:38,0:38:99:0,111,1441	0/0:33,0:33:90.17:0,90,1164	1/1:0,23:23:60.14:915,60,0	1/1:1,17:18:45.15:719,45,0	1/1:1,29:30:87.30:1390,87,0	1/1:2,41:43:99:1846,120,0	1/1:0,34:34:87.30:1389,87,0	1/1:0,42:42:99:1930,123,0	1/1:0,16:16:36.12:562,36,0	1/1:0,39:39:99:1725,108,0	1/1:1,35:36:99:1572,99,0	1/1:2,32:34:93.32:1477,93,0	0/0:35,0:35:99:0,105,1435	1/1:0,28:28:72.25:1150,72,0	1/1:0,26:26:75.26:1198,75,0	1/1:1,25:26:69.24:1102,69,0	1/1:1,27:28:69.02:1210,69,0	1/1:0,18:19:54.13:822,54,0	1/1:1,47:48:99:2013,126,0	1/1:0,23:23:69.24:1100,69,0	1/1:0,27:28:69.23:1076,69,0	1/1:0,35:35:99:1581,99,0	1/1:0,23:23:54.18:862,54,0	1/1:1,27:29:81.17:1192,81,0	1/1:0,23:22:66.23:1054,66,0	1/1:0,17:17:51.17:809,51,0
chr10	20979099	.	A	ACTATTTAC	9202.49	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=5.413;DP=741;FS=5.099;HRun=0;HaplotypeScore=293.6124;InbreedingCoeff=0.8866;MQ=82.99;MQ0=0;MQRankSum=-10.207;QD=96.87;ReadPosRankSum=-2.063;VQSLOD=3.9765;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,129,2958	1/1:2,11:13:36.12:1504,36,0	0/0:29,0:29:83.97:0,84,2176	0/0:24,0:24:66.17:0,66,1686	1/1:3,23:26:72.24:2604,72,0	0/0:28,0:28:72.77:0,73,1662	0/0:37,0:37:99:0,101,2032	0/0:31,0:31:65.93:0,66,1689	0/0:39,0:39:91.18:0,91,2426	1/1:1,16:17:51.18:2239,51,0	1/1:1,17:18:48.16:1697,48,0	0/0:33,0:33:96.30:0,96,2244	0/0:31,0:31:60.01:0,60,1856	0/0:27,0:27:70.47:0,70,1579	0/0:25,0:25:75.26:0,75,2222	0/0:25,0:25:71.05:0,71,1591	0/0:18,0:18:45.12:0,45,1023	0/0:17,0:17:44.89:0,45,1068	1/1:2,8:10:26.20:1126,26,0	0/0:20,0:20:57.19:0,57,1226	0/0:42,0:42:72.93:0,73,2277	0/0:32,0:32:87.17:0,87,1811	0/0:25,0:25:60.21:0,60,1366	0/0:21,0:21:48.16:0,48,1111	0/0:23,0:23:63.18:0,63,1393	0/0:37,0:37:40.93:0,41,2329	0/0:33,0:33:96.33:0,96,2258	0/1:11,0:11:31.88:32,0,536
chr10	20979101	.	G	GGA	4065.40	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=13.139;DP=780;FS=39.711;HRun=0;HaplotypeScore=263.7302;InbreedingCoeff=0.9373;MQ=81.47;MQ0=0;MQRankSum=-13.660;QD=36.30;ReadPosRankSum=-0.266;VQSLOD=0.5569;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,126,2044	1/1:3,11:14:0.35:523,0,0	0/0:32,0:32:89.55:0,90,1399	0/0:22,0:22:61.09:0,61,949	1/1:6,23:29:47.73:826,48,0	0/0:29,0:29:75.26:0,75,1221	0/0:38,0:38:99:0,102,1631	0/0:32,0:32:90.29:0,90,1372	0/0:38,0:38:99:0,111,1795	1/1:17,16:33:68.81:1523,69,0	1/1:6,17:23:19.39:550,19,0	0/0:33,0:33:96.33:0,96,1564	0/0:30,0:30:81.28:0,81,1313	0/0:27,0:27:75.23:0,75,1195	0/0:26,0:26:78.25:0,78,1248	0/0:25,0:25:72.23:0,72,1148	0/0:19,0:19:44.89:0,45,690	0/0:18,0:18:54.16:0,54,852	1/1:5,8:13:36.11:643,36,0	0/0:22,0:22:57.19:0,57,910	0/0:41,0:41:99:0,110,1743	0/0:32,0:32:87.30:0,87,1406	0/0:28,0:28:60.20:0,60,972	0/0:21,0:21:48.16:0,48,781	0/0:26,0:26:63.22:0,63,1023	0/0:38,0:38:99:0,109,1759	0/0:34,0:34:96.33:0,96,1561	0/0:8,0:8:24.08:0,24,391
chr10	20979127	.	GAAAAATGGTTGGTAGCGT	G	17285.67	PASS	AB=1.000;AC=45;AF=0.833;AN=54;BaseQRankSum=7.375;DP=682;FS=2.555;HRun=0;HaplotypeScore=391.7202;InbreedingCoeff=0.6094;MQ=69.43;MQ0=1;MQRankSum=-7.284;QD=30.06;ReadPosRankSum=3.698;VQSLOD=2.4123;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:32,13:45:22.32:1148,22,0	1/1:9,2:11:6.02:289,6,0	0/0:29,0:28:8.51:0,9,218	0/0:20,0:19:15.02:0,15,426	1/1:21,3:24:2.94:285,3,0	1/1:14,8:22:18.06:868,18,0	1/1:27,4:31:6.02:289,6,0	1/1:24,0:24:9.02:144,9,0	1/1:22,12:34:27.09:1302,27,0	1/1:25,5:30:15.05:723,15,0	1/1:18,3:21:9.03:434,9,0	1/1:19,9:28:24.08:1157,24,0	1/1:19,9:28:17.93:868,18,0	1/1:15,6:21:15.05:723,15,0	0/0:29,0:29:60.21:0,60,4487	1/1:7,0:13:15.05:629,15,0	1/1:10,0:15:6.02:156,6,0	./.	1/1:19,1:20:3:145,3,0	1/1:10,13:23:33.11:1591,33,0	0/1:30,0:30:10.73:137,0,11	1/1:22,9:31:15.05:723,15,0	1/1:17,11:28:22.32:1095,22,0	0/0:13,4:17:1.72:0,2,4	1/1:10,12:22:30.10:1447,30,0	1/1:23,11:34:30.10:1395,30,0	1/1:22,7:29:24.08:1157,24,0	1/1:4,7:11:12.04:579,12,0
chr10	20979225	.	TG	T	3563.38	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=11.381;DP=729;FS=0.404;HRun=1;HaplotypeScore=112.9591;InbreedingCoeff=0.9976;MQ=73.68;MQ0=0;MQRankSum=0.322;QD=33.94;ReadPosRankSum=0.484;VQSLOD=3.2789;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,117,1844	1/1:14,0:14:17.71:222,18,0	0/0:13,0:13:25.63:0,26,339	0/0:17,0:17:34.66:0,35,396	1/1:0,24:24:72.23:931,72,0	0/0:24,0:24:66.23:0,66,1053	0/0:33,0:33:99:0,99,1571	0/0:31,0:31:93.31:0,93,1459	0/0:24,0:24:63.21:0,63,997	1/1:0,24:24:72.23:934,72,0	1/1:0,24:24:63.20:818,63,0	0/0:23,0:23:69.23:0,69,1087	0/0:34,0:34:99:0,99,1578	0/0:28,0:28:81.28:0,81,1284	0/0:33,0:33:99:0,99,1556	0/0:31,0:31:87.30:0,87,1377	0/0:21,0:21:54.18:0,54,858	0/0:14,0:14:39.13:0,39,613	1/1:2,17:19:51.17:659,51,0	0/0:27,0:27:69.24:0,69,1103	0/0:34,0:34:96.33:0,96,1529	0/0:25,0:25:69.24:0,69,1095	0/0:21,0:21:51.17:0,51,815	0/0:35,0:35:90.31:0,90,1437	0/0:27,0:27:75.24:0,75,1176	0/0:34,1:35:63.39:0,63,1527	0/0:35,0:35:96.33:0,96,1512	0/0:16,0:16:39.13:0,39,623
chr10	20979226	.	GA	G	3577.49	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=11.416;DP=726;FS=0.404;HRun=1;HaplotypeScore=110.0711;InbreedingCoeff=0.9974;MQ=73.32;MQ0=0;MQRankSum=-0.142;QD=34.40;ReadPosRankSum=0.547;VQSLOD=3.3236;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,120,1890	1/1:0,14:14:17.72:236,18,0	0/0:13,0:13:23.70:0,24,326	0/0:16,0:16:35.60:0,36,426	1/1:24,0:24:72.23:931,72,0	0/0:25,0:25:69.22:0,69,1059	0/0:33,0:33:99:0,99,1531	0/0:31,0:31:93.30:0,93,1443	0/0:24,0:24:63.17:0,63,964	1/1:24,0:24:72.23:934,72,0	1/1:25,0:25:63.20:818,63,0	0/0:23,0:23:69.18:0,69,1064	0/0:34,0:34:99:0,99,1572	0/0:28,0:28:81.23:0,81,1264	0/0:34,0:34:99:0,102,1580	0/0:31,0:31:87.25:0,87,1278	0/0:19,0:19:54.18:0,54,810	0/0:15,0:15:42.08:0,42,563	1/1:17,0:17:51.17:659,51,0	0/0:27,0:27:69.24:0,69,1103	0/0:33,0:33:96.30:0,96,1486	0/0:25,0:25:69.24:0,69,1102	0/0:21,0:21:51.17:0,51,815	0/0:34,0:34:90.31:0,90,1438	0/0:27,0:27:75.25:0,75,1175	0/0:34,0:34:63.32:0,63,1490	0/0:35,0:35:96.24:0,96,1476	0/0:16,0:16:39.13:0,39,623
chr10	20979963	.	T	TCC	6469.80	PASS	AB=0.739;AC=38;AF=0.679;AN=56;BaseQRankSum=1.765;DP=638;FS=1.368;HRun=1;HaplotypeScore=119.9004;InbreedingCoeff=0.8441;MQ=64.47;MQ0=16;MQRankSum=1.070;QD=14.19;ReadPosRankSum=0.969;VQSLOD=1.9721;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:29:37.41:289,37,0	0/0:18,0:18:15.76:0,16,234	0/0:29,0:15:32.10:0,32,325	0/0:36,0:15:32.78:0,33,316	0/0:21,0:21:47.82:0,48,388	1/1:25,0:25:39.03:327,39,0	1/1:25,0:25:42.01:376,42,0	1/1:30,0:29:55.95:488,56,0	1/1:19,0:19:39.04:309,39,0	0/0:26,0:26:40.70:0,41,556	0/0:16,0:16:26.71:0,27,223	1/1:23,0:23:43.90:384,44,0	1/1:29,0:29:17.16:302,17,0	1/1:18,1:19:39.76:343,40,0	0/0:20,0:20:47.65:0,48,410	0/1:6,15:25:0.96:61,0,1	1/1:29,0:29:21.94:320,22,0	0/1:9,1:10:22.34:154,0,22	0/0:16,0:15:34.55:0,35,285	1/1:18,0:16:32.34:260,32,0	1/1:24,0:24:26.68:228,27,0	1/1:16,0:16:29.57:242,30,0	1/1:30,0:30:57.03:462,57,0	1/1:25,0:25:53.60:493,54,0	1/1:19,0:19:35.62:329,36,0	1/1:23,0:23:3.99:433,4,0	1/1:24,0:24:53.37:395,53,0	1/1:13,0:13:34.10:273,34,0
chr10	20980309	.	G	GT	12880.12	PASS	AB=1.000;AC=41;AF=0.732;AN=56;BaseQRankSum=-9.124;DP=570;FS=1.192;HRun=5;HaplotypeScore=60.4906;InbreedingCoeff=0.9322;MQ=75.32;MQ0=1;MQRankSum=-2.298;QD=30.02;ReadPosRankSum=3.770;VQSLOD=5.3925;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,43:45:99:1697,129,0	0/0:10,0:10:24.06:0,24,258	0/0:12,0:12:27.07:0,27,287	0/1:11,0:12:4.29:4,0,146	0/0:27,0:27:72.16:0,72,765	1/1:0,21:21:54.18:711,54,0	1/1:0,27:27:69.22:908,69,0	1/1:4,19:23:60.17:760,60,0	1/1:0,12:12:36.12:474,36,0	0/0:20,0:20:54.13:0,54,575	0/0:11,0:11:21.05:0,21,225	1/1:1,14:15:36.12:474,36,0	1/1:0,8:8:21.07:276,21,0	1/1:2,13:15:39.13:513,39,0	0/0:32,0:32:90.22:0,90,967	1/1:2,0:20:51.75:265,52,0	1/1:1,0:32:74.75:383,75,0	1/1:0,0:10:28.75:147,29,0	0/0:29,0:29:78.11:0,78,799	1/1:0,14:14:42.05:513,42,0	1/1:1,28:29:75.24:987,75,0	1/1:1,18:19:48.16:632,48,0	1/1:3,20:24:57.08:749,57,0	1/1:1,31:32:81.26:1066,81,0	1/1:2,14:15:39.13:513,39,0	1/1:4,21:25:33.96:781,34,0	1/1:2,14:16:42.14:553,42,0	1/1:1,12:13:36.12:474,36,0
chr10	20980539	.	C	CA	22033.27	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-10.468;DP=575;FS=0.000;HRun=1;HaplotypeScore=50.8707;InbreedingCoeff=0.9958;MQ=85.21;MQ0=0;MQRankSum=-10.186;QD=43.63;ReadPosRankSum=5.134;VQSLOD=4.4072;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,32:33:90.31:1438,90,0	1/1:0,7:7:18.06:288,18,0	0/0:17,0:16:44.26:0,44,575	0/0:30,0:30:82.58:0,83,1031	1/1:0,19:19:57.19:911,57,0	1/1:0,26:26:69.24:1103,69,0	1/1:0,20:20:54.18:864,54,0	1/1:0,32:32:96.33:1533,96,0	1/1:0,14:14:42.14:671,42,0	1/1:0,21:21:63.21:1008,63,0	1/1:0,14:14:36.12:575,36,0	1/1:0,10:10:30.10:480,30,0	1/1:0,27:27:72.25:1151,72,0	1/1:0,19:19:54.18:863,54,0	0/0:22,0:22:66.22:0,66,923	1/1:0,22:22:54.18:863,54,0	1/1:0,28:28:72.25:1151,72,0	1/1:1,23:24:63.21:1007,63,0	1/1:0,25:25:75.22:1172,75,0	1/1:0,21:21:57.19:911,57,0	1/1:0,22:22:57.19:911,57,0	1/1:0,22:22:57.19:911,57,0	1/1:1,17:18:36.12:576,36,0	1/1:0,21:21:60.20:959,60,0	1/1:1,9:10:27.09:431,27,0	1/1:0,24:24:72.25:1152,72,0	1/1:0,16:16:45.15:719,45,0	1/1:0,10:10:24.08:383,24,0
chr10	20980730	.	TGG	T	1925.98	PASS	AB=0.917;AC=11;AF=0.196;AN=56;BaseQRankSum=-11.086;DP=559;FS=4.583;HRun=9;HaplotypeScore=103.6263;InbreedingCoeff=0.4040;MQ=67.50;MQ0=3;MQRankSum=2.420;QD=10.82;ReadPosRankSum=-3.072;VQSLOD=0.9172;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:9.23:0,9,564	0/0:3,0:7:14.51:0,15,50	0/0:17,1:17:1.07:0,1,361	0/0:13,0:10:8.62:0,9,88	0/0:2,0:14:24.83:0,25,87	0/0:21,0:21:35.44:0,35,469	0/0:25,0:24:29.98:0,30,474	0/0:27,0:27:8.08:0,8,402	0/0:15,0:15:17.43:0,17,329	0/0:2,1:21:12.45:0,12,144	0/0:1,0:14:27.45:0,27,96	0/1:19,0:19:48.37:48,0,272	0/1:23,0:23:10.69:11,0,409	0/1:17,0:17:4.02:4,0,318	0/0:24,0:24:69.22:0,69,1078	1/1:1,20:20:39.12:454,39,0	1/1:1,15:16:24.07:279,24,0	1/1:3,39:41:99:1257,108,0	0/1:5,1:17:4.41:4,0,69	0/0:12,0:12:24.01:0,24,230	0/0:22,0:22:9.50:0,10,394	0/0:11,0:11:21.03:0,21,207	0/0:25,0:25:21.70:0,22,554	0/1:23,0:23:25.61:26,0,421	0/0:19,0:19:21.43:0,21,357	0/0:20,0:22:30.52:0,31,357	0/0:26,0:26:45.33:0,45,564	0/0:12,0:12:36.05:0,36,341
chr10	20980860	.	A	AC	9766.34	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-2.638;DP=508;FS=1.992;HRun=1;HaplotypeScore=83.0183;InbreedingCoeff=0.9918;MQ=82.05;MQ0=0;MQRankSum=-2.818;QD=31.71;ReadPosRankSum=0.858;VQSLOD=4.6054;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,22:23:49.46:686,49,0	0/0:5,0:5:14.59:0,15,89	0/0:16,0:16:39.10:0,39,490	0/0:15,0:15:41.48:0,41,481	0/0:22,0:22:61.60:0,62,386	1/1:2,15:17:35.24:510,35,0	1/1:0,21:21:54.17:708,54,0	1/1:2,26:28:72.02:904,72,0	1/1:1,11:12:29.83:382,30,0	0/0:20,0:20:46.17:0,46,272	0/0:13,0:13:37.89:0,38,240	1/1:1,12:13:29.99:433,30,0	1/1:3,15:18:35.16:479,35,0	1/1:2,14:16:33.59:524,34,0	0/0:25,0:25:75.24:0,75,973	0/0:15,0:15:41.36:0,41,293	0/0:14,0:14:35.18:0,35,222	0/0:28,0:28:81.34:0,81,539	0/0:27,0:27:70.66:0,71,466	1/1:0,22:22:63.20:816,63,0	1/1:2,17:19:36.74:535,37,0	1/1:1,7:8:21.07:283,21,0	1/1:1,14:15:36.58:469,37,0	1/1:2,27:29:76.30:972,76,0	1/1:0,25:25:60.19:806,60,0	1/1:1,15:16:23.18:522,23,0	1/1:1,20:21:45.14:593,45,0	1/1:1,4:5:12.04:144,12,0
chr10	20980985	.	CTTTCTTTTT	C	2335.42	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-0.667;DP=481;FS=6.971;HRun=0;HaplotypeScore=149.0517;InbreedingCoeff=0.9403;MQ=57.32;MQ0=10;MQRankSum=-5.064;QD=37.67;ReadPosRankSum=4.770;VQSLOD=2.6968;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:26:61.10:0,61,1621	0/0:8,0:8:17.41:0,17,490	0/0:11,0:8:7.81:0,8,115	0/0:10,0:7:8.71:0,9,300	0/0:23,0:22:36.11:0,36,1255	0/0:17,0:15:44.28:0,44,1164	0/0:20,0:19:53.87:0,54,908	0/0:31,0:29:59.90:0,60,1224	0/0:9,0:9:27.09:0,27,809	0/0:26,0:26:64.03:0,64,1527	0/0:11,0:11:27.07:0,27,862	0/0:17,0:17:45.05:0,45,913	0/0:14,0:14:36.06:0,36,800	0/0:14,0:13:39.03:0,39,952	0/0:12,0:12:27.06:0,27,637	1/1:2,21:22:30.10:880,30,0	1/1:3,13:16:21.07:479,21,0	1/1:10,11:17:44.48:1118,44,0	0/0:31,0:31:89.42:0,89,2185	0/0:12,0:11:32.11:0,32,481	0/0:9,0:10:18.01:0,18,315	0/0:13,0:13:32.08:0,32,755	0/0:17,0:18:39.89:0,40,863	0/0:11,0:11:21.89:0,22,575	0/0:26,0:25:30.54:0,31,938	0/0:16,0:16:34.66:0,35,741	0/0:22,0:21:62.96:0,63,1681	0/0:10,0:9:17.91:0,18,434
chr10	20980989	.	C	CTT	4901.51	PASS	AB=0.968;AC=44;AF=0.786;AN=56;BaseQRankSum=-5.237;DP=491;FS=7.544;HRun=14;HaplotypeScore=106.9475;InbreedingCoeff=0.5384;MQ=48.46;MQ0=15;MQRankSum=0.402;QD=11.40;ReadPosRankSum=-4.647;VQSLOD=2.3924;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:22,2:27:16.46:290,16,0	1/1:4,3:8:2.15:43,2,0	0/1:7,0:4:10.58:18,0,11	0/0:7,0:5:10.69:0,11,66	1/1:6,11:18:17.03:191,17,0	1/1:17,1:19:39.08:300,39,0	1/1:17,1:21:33.39:278,33,0	0/1:23,0:25:1.35:83,0,1	1/1:7,3:10:14.21:175,14,0	1/1:10,11:24:34.72:348,35,0	1/1:4,8:13:4.04:170,4,0	1/1:15,1:17:28.32:225,28,0	1/1:17,1:18:25.72:248,26,0	1/1:11,1:14:27.51:226,28,0	0/0:11,0:12:5.35:0,5,77	0/0:21,0:20:7.03:0,7,74	0/1:17,0:15:6.96:7,0,32	0/0:18,0:16:15.77:0,16,107	1/1:15,17:37:68.29:623,68,0	1/1:12,1:12:17.38:159,17,0	1/1:7,0:8:9.81:69,10,0	1/1:18,1:19:27.82:323,28,0	1/1:13,0:16:29.56:226,30,0	0/1:13,0:12:0.38:7,0,0	1/1:8,4:26:31.94:279,32,0	1/1:15,0:16:27.26:228,27,0	1/1:17,2:22:8.87:262,9,0	1/1:7,1:7:12.78:123,13,0
chr10	20981016	.	T	TC	5176.06	PASS	AC=32;AF=0.640;AN=50;BaseQRankSum=-0.269;DP=385;FS=21.285;HRun=1;HaplotypeScore=74.0229;InbreedingCoeff=0.9546;MQ=38.63;MQ0=25;MQRankSum=-4.840;QD=23.00;ReadPosRankSum=2.383;VQSLOD=3.6658;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,22:24:39.13:548,39,0	0/0:8,0:7:18.01:0,18,205	./.	./.	0/0:17,0:17:33.06:0,33,379	1/1:3,13:11:24.08:337,24,0	1/1:3,12:14:33.07:436,33,0	1/1:9,6:12:29.92:314,30,0	1/1:1,5:6:6.02:84,6,0	0/0:18,0:18:36.07:0,36,442	0/0:12,0:11:18.06:0,18,230	1/1:2,11:12:21.07:281,21,0	1/1:6,10:16:35.98:423,36,0	1/1:4,12:14:26.95:330,27,0	0/0:14,0:13:24.06:0,24,281	0/0:16,0:15:27.07:0,27,323	0/0:17,0:14:26.97:0,27,294	0/0:24,0:20:54.11:0,54,648	0/0:27,0:24:60.10:0,60,705	1/1:3,5:5:15:187,15,0	1/1:4,3:6:5.97:61,6,0	1/1:5,14:19:35.86:426,36,0	1/1:5,10:14:29.92:347,30,0	./.	1/1:5,8:13:29.94:354,30,0	1/1:3,14:16:39.13:546,39,0	1/1:4,13:16:20.87:292,21,0	1/1:1,5:6:15.05:211,15,0
chr10	20982336	.	C	CTG	29596.96	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-8.811;DP=684;FS=2.452;HRun=0;HaplotypeScore=75.6974;InbreedingCoeff=0.9784;MQ=80.19;MQ0=0;MQRankSum=-7.066;QD=47.43;ReadPosRankSum=5.239;VQSLOD=5.8344;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,38:40:99:1853,99,0	1/1:0,9:9:24.08:449,24,0	0/0:22,0:22:59.84:0,60,748	0/0:16,0:16:35.21:0,35,496	1/1:2,19:21:54.19:1009,54,0	1/1:1,33:34:84.29:1572,84,0	1/1:2,34:36:87.30:1629,87,0	1/1:2,27:30:84.24:1463,84,0	1/1:1,27:28:69.24:1290,69,0	1/1:1,22:24:69.20:1227,69,0	1/1:1,15:16:36.12:658,36,0	1/1:0,27:27:69.24:1292,69,0	1/1:0,21:22:66.23:1218,66,0	1/1:1,29:30:78.27:1459,78,0	0/0:22,0:22:66.22:0,66,971	1/1:1,24:25:63.20:1176,63,0	1/1:1,40:41:99:2020,108,0	1/1:1,32:34:87.30:1613,87,0	1/1:0,18:19:54.19:1011,54,0	1/1:0,24:24:54.19:1009,54,0	1/1:3,29:32:75.26:1404,75,0	1/1:0,16:16:39.13:729,39,0	1/1:0,14:14:26.83:505,27,0	1/1:0,40:41:99:1966,105,0	1/1:1,17:18:48.16:899,48,0	1/1:0,16:16:45.13:809,45,0	1/1:1,22:23:63.22:1179,63,0	1/1:1,2:3:9.03:158,9,0
chr10	20983064	.	G	GA	1479.69	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-9.622;DP=568;FS=6.845;HRun=6;HaplotypeScore=55.4145;InbreedingCoeff=0.9930;MQ=77.06;MQ0=0;MQRankSum=-0.895;QD=26.90;ReadPosRankSum=0.919;VQSLOD=4.0725;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:78.15:0,78,787	0/0:11,0:11:24.05:0,24,245	0/0:13,0:13:15.12:0,15,227	0/0:13,0:13:28.50:0,28,254	0/0:27,0:27:75.14:0,75,756	0/0:22,0:22:60.11:0,60,603	0/0:23,0:23:66.15:0,66,672	0/0:32,0:32:90.19:0,90,913	0/0:14,0:14:39.03:0,39,379	0/0:34,0:34:96.19:0,96,967	0/0:21,0:21:57.10:0,57,572	0/0:15,0:15:36.05:0,36,354	0/0:18,0:18:54.12:0,54,551	0/0:20,0:20:54.12:0,54,550	0/0:17,0:17:48.11:0,48,489	1/1:3,11:14:30.10:377,30,0	1/1:2,18:20:51.16:641,51,0	1/1:0,21:21:48.15:604,48,0	0/0:11,0:11:30.07:0,30,305	0/0:26,0:26:75.16:0,75,763	0/0:21,0:21:57.11:0,57,574	0/0:24,0:24:69.14:0,69,697	0/0:30,0:30:81.15:0,81,812	0/0:17,0:17:51.12:0,51,520	0/0:19,0:19:51.11:0,51,516	0/0:22,0:22:63.14:0,63,642	0/0:22,0:22:63.10:0,63,631	0/0:14,0:14:42.05:0,42,412
chr10	20984013	.	TGTG	T	2317.37	PASS	AB=0.970;AC=25;AF=0.446;AN=56;BaseQRankSum=-3.258;DP=674;FS=54.007;HRun=0;HaplotypeScore=140.2783;InbreedingCoeff=-0.3153;MQ=58.48;MQ0=52;MQRankSum=-0.085;QD=4.74;ReadPosRankSum=-4.470;VQSLOD=-0.7504;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:56,1:54:68.07:314,0,68	0/1:7,0:4:1.82:2,0,32	0/0:49,0:10:24.07:0,24,291	0/0:59,0:23:57.48:0,57,686	0/1:13,0:11:26.61:27,0,74	0/1:26,1:27:21.41:76,0,21	0/1:19,0:18:0.91:1,0,21	1/1:22,0:21:16.07:177,16,0	0/1:17,0:15:55.25:134,0,55	0/1:21,0:20:72.19:145,0,72	0/0:13,0:8:6.20:0,6,40	0/1:21,3:24:83.98:277,0,84	0/1:9,0:9:20.44:20,0,22	0/1:14,0:14:17.55:18,0,61	0/0:21,0:19:50.57:0,51,840	0/0:17,0:17:24.04:0,24,314	0/0:26,0:26:12.31:0,12,261	0/1:27,0:27:38.91:39,0,554	0/1:18,0:13:3.56:111,0,4	0/1:19,0:19:15.63:121,0,16	0/1:37,2:37:73.52:199,0,74	0/1:16,4:18:6.63:51,0,7	1/1:19,0:17:6.48:222,6,0	0/1:42,3:44:97.11:189,0,97	1/1:6,5:11:5.31:54,5,0	0/1:21,2:21:12.60:112,0,13	0/1:17,1:18:56.13:148,0,56	0/1:20,0:20:9.87:43,0,10
chr10	20984015	.	TG	T	3840.13	PASS	AB=0.964;AC=45;AF=0.804;AN=56;BaseQRankSum=2.267;DP=662;FS=12.647;HRun=2;HaplotypeScore=119.4055;InbreedingCoeff=0.5305;MQ=60.43;MQ0=50;MQRankSum=2.381;QD=7.46;ReadPosRankSum=4.067;VQSLOD=-0.1888;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:54,4:55:38.38:417,38,0	1/1:5,2:4:7.24:62,7,0	0/0:48,1:10:27.08:0,27,322	0/0:59,0:25:58.94:0,59,711	1/1:13,0:11:10.19:67,10,0	1/1:22,4:26:14.62:146,15,0	1/1:18,0:17:12.08:79,12,0	1/1:18,3:20:18.47:166,18,0	0/1:18,0:16:21.45:139,0,21	1/1:19,0:18:32.56:306,33,0	1/1:12,0:7:3.85:26,4,0	1/1:23,2:25:21.91:267,22,0	1/1:8,0:8:3.22:33,3,0	1/1:13,1:14:9.09:59,9,0	0/0:21,0:19:50.02:0,50,655	0/0:18,0:18:26.89:0,27,276	0/1:23,1:24:16.52:17,0,271	0/1:25,2:27:39.39:39,0,456	1/1:14,1:10:2.73:150,3,0	1/1:16,1:17:28.24:214,28,0	1/1:37,0:35:48.37:290,48,0	1/1:21,0:19:24.31:153,24,0	1/1:19,1:18:24.66:182,25,0	1/1:45,1:45:43.81:342,44,0	1/1:11,0:11:7.34:42,7,0	1/1:20,1:19:16.92:238,17,0	1/1:19,0:19:29.94:207,30,0	1/1:17,1:18:25.54:198,26,0
chr10	20984016	.	G	GTGT	6690.39	PASS	AB=0.831;AC=44;AF=0.786;AN=56;BaseQRankSum=-0.161;DP=656;FS=14.754;HRun=0;HaplotypeScore=135.9075;InbreedingCoeff=0.2945;MQ=61.97;MQ0=50;MQRankSum=0.826;QD=12.77;ReadPosRankSum=2.820;VQSLOD=3.9974;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:49,0:53:4.06:616,4,0	1/1:3,0:3:8.92:112,9,0	0/0:50,0:11:27.08:0,27,326	0/0:60,0:27:59.10:0,59,708	1/1:1,9:11:14.94:274,15,0	1/1:21,0:26:24.54:302,25,0	1/1:2,0:15:15.46:206,15,0	1/1:21,0:21:22.04:201,22,0	0/1:15,0:16:16.61:237,0,17	1/1:0,17:17:39.13:687,39,0	1/1:2,1:7:5.91:64,6,0	1/1:20,0:25:46.10:427,46,0	1/1:6,0:7:4.42:88,4,0	0/1:13,0:14:28.90:69,0,29	0/0:22,0:20:51.17:0,51,768	0/1:17,0:18:65.53:66,0,192	0/1:21,0:24:89.88:90,0,254	0/1:16,0:27:88.78:89,0,467	0/1:4,0:9:6.76:212,0,7	1/1:12,0:17:25.95:361,26,0	1/1:35,0:36:41.22:435,41,0	1/1:14,0:19:24.79:305,25,0	1/1:17,0:17:24.47:230,24,0	1/1:36,0:44:31.97:634,32,0	1/1:9,0:11:6.96:84,7,0	1/1:17,0:18:18.47:310,18,0	1/1:15,0:19:9.11:313,9,0	1/1:12,0:18:15.71:277,16,0
chr10	20984018	.	T	TG	3763.87	PASS	AB=0.750;AC=33;AF=0.589;AN=56;BaseQRankSum=0.561;DP=640;FS=3.401;HRun=2;HaplotypeScore=121.4231;InbreedingCoeff=0.8549;MQ=63.80;MQ0=49;MQRankSum=0.492;QD=9.96;ReadPosRankSum=4.526;VQSLOD=1.9211;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:49,7:53:30.62:401,31,0	0/0:6,0:3:8.49:0,8,60	0/0:51,0:12:29.77:0,30,357	0/0:60,0:28:69.36:0,69,876	0/0:13,0:11:14.87:0,15,108	1/1:22,4:26:24.38:230,24,0	1/1:12,4:15:14.96:174,15,0	1/1:21,0:20:3.88:55,4,0	1/1:14,2:15:23.42:155,23,0	0/0:18,0:17:38.81:0,39,317	0/0:10,0:5:5.84:0,6,52	1/1:21,5:26:26.01:299,26,0	1/1:6,1:7:7.46:82,7,0	1/1:11,0:11:10.72:62,11,0	0/0:23,0:21:51.17:0,51,661	0/0:18,0:18:30.07:0,30,345	0/0:24,0:24:40.32:0,40,464	0/0:26,0:26:52.39:0,52,609	0/0:13,0:8:17.77:0,18,120	1/1:12,5:17:22.70:261,23,0	1/1:31,3:33:53.43:375,53,0	1/1:14,7:19:30.15:289,30,0	1/1:15,2:15:15.35:138,15,0	1/1:35,7:41:57.44:521,57,0	1/1:9,2:11:9.39:79,9,0	1/1:19,3:20:16.22:186,16,0	1/1:16,3:19:27.89:253,28,0	0/1:10,5:15:8.09:206,0,8
chr10	20985305	.	G	GA	14921.95	PASS	AB=0.600;AC=49;AF=0.875;AN=56;BaseQRankSum=-6.520;DP=682;FS=0.526;HRun=8;HaplotypeScore=81.0556;InbreedingCoeff=0.8311;MQ=79.39;MQ0=0;MQRankSum=-5.121;QD=24.30;ReadPosRankSum=1.544;VQSLOD=5.4835;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:11,22:33:31.62:683,0,32	1/1:1,0:14:32.31:191,32,0	0/0:18,0:18:23.79:0,24,190	0/0:20,0:20:24.42:0,24,331	1/1:1,1:27:64.47:392,64,0	1/1:3,13:16:39.12:450,39,0	1/1:2,22:24:54.12:608,54,0	1/1:9,36:45:80.69:1140,81,0	1/1:4,19:23:57.16:650,57,0	1/1:1,1:29:76.45:485,76,0	1/1:0,0:25:64.49:380,64,0	1/1:1,19:20:51.15:588,51,0	1/1:1,13:14:36.11:416,36,0	1/1:3,15:18:17.67:457,18,0	0/0:30,0:30:81.04:0,81,741	1/1:3,26:30:69.04:776,69,0	1/1:2,17:19:51.15:589,51,0	1/1:3,16:19:48.14:554,48,0	1/1:2,1:33:88.19:540,88,0	1/1:3,27:30:50.71:822,51,0	1/1:4,8:12:21.06:242,21,0	1/1:4,21:25:60.18:692,60,0	1/1:4,24:28:39.13:700,39,0	1/1:2,20:22:54.16:623,54,0	1/1:4,32:36:78.23:900,78,0	1/1:3,33:37:99:1138,102,0	1/1:3,18:21:23.69:525,24,0	1/1:0,14:14:33.10:381,33,0
chr10	20985835	.	AT	A	8266.90	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=13.455;DP=617;FS=0.330;HRun=10;HaplotypeScore=61.5750;InbreedingCoeff=0.9872;MQ=70.57;MQ0=0;MQRankSum=-0.585;QD=20.88;ReadPosRankSum=1.427;VQSLOD=5.7835;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,30:32:86.98:755,87,0	0/0:14,0:14:39.08:0,39,409	0/0:12,0:11:13.58:0,14,167	0/0:8,0:8:18.37:0,18,169	0/0:30,1:31:52.13:0,52,788	1/1:5,19:24:53.97:469,54,0	1/1:1,22:23:53.99:469,54,0	1/1:6,22:28:65.94:566,66,0	1/1:0,15:15:44.99:391,45,0	0/0:25,0:25:63.16:0,63,690	0/0:18,0:18:45.10:0,45,482	1/1:2,25:27:62.98:547,63,0	1/1:2,22:24:62.98:547,63,0	1/1:1,19:20:44.99:391,45,0	0/0:26,0:26:69.16:0,69,746	0/0:25,0:24:72.19:0,72,796	0/0:20,0:20:51.14:0,51,564	0/0:14,2:16:26.11:0,26,446	0/0:26,0:25:66.16:0,66,716	1/1:2,21:23:56.86:474,57,0	1/1:4,23:27:62.98:547,63,0	1/1:4,17:21:47.89:403,48,0	1/1:4,13:17:32.97:286,33,0	1/1:2,19:21:53.95:463,54,0	1/1:4,23:27:65.98:573,66,0	1/1:6,28:34:83.82:711,84,0	1/1:2,27:29:68.98:599,69,0	1/1:0,4:4:9:78,9,0
chr10	20986343	.	ATG	A	87.57	PASS	AB=0.928;AC=10;AF=0.179;AN=56;BaseQRankSum=0.473;DP=578;FS=7.477;HRun=0;HaplotypeScore=111.6572;InbreedingCoeff=-0.0755;MQ=63.12;MQ0=4;MQRankSum=1.456;QD=0.44;ReadPosRankSum=-0.516;VQSLOD=1.6723;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:33:39.57:0,40,812	0/0:11,0:11:2.98:0,3,23	0/0:22,0:12:0:0,0,0	0/0:34,0:20:2.84:0,3,40	0/0:19,0:19:9.01:0,9,101	0/0:24,1:25:5.55:0,6,431	0/0:26,0:26:36.54:0,37,471	0/1:11,1:12:23.65:24,0,57	0/0:8,0:8:12.04:0,12,180	0/0:16,0:19:29.98:0,30,317	1/1:17,0:17:1.55:4,2,0	0/1:26,4:28:49.36:49,0,565	0/0:15,0:16:3.90:0,4,187	0/1:15,0:15:1.55:2,0,252	0/0:20,1:21:5.39:0,5,448	0/0:16,0:16:15.05:0,15,228	0/1:35,5:41:88.87:89,0,835	0/1:29,1:30:9.89:10,0,662	0/0:17,0:17:12.51:0,13,152	0/0:11,0:11:24.05:0,24,315	0/0:44,0:44:8.74:0,9,483	0/1:10,1:11:12.46:12,0,230	0/0:8,0:8:9.01:0,9,115	0/1:18,4:22:15.93:16,0,580	0/0:14,0:14:21.03:0,21,275	0/0:23,0:23:31.33:0,31,432	0/1:19,0:19:3.41:3,0,348	0/0:12,0:12:12:0,12,151
chr10	20986544	.	C	CCGT	1051.44	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-0.433;DP=427;FS=9.605;HRun=0;HaplotypeScore=84.5678;InbreedingCoeff=0.9442;MQ=71.16;MQ0=0;MQRankSum=2.025;QD=21.03;ReadPosRankSum=0.704;VQSLOD=2.8534;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:33.58:0,34,495	1/1:5,0:5:6.01:71,6,0	0/0:14,0:13:17.71:0,18,240	0/0:14,0:13:12.65:0,13,262	1/1:12,2:14:20.98:218,21,0	0/0:11,0:11:21.07:0,21,319	0/0:28,0:28:63.67:0,64,921	0/0:12,0:12:30.10:0,30,427	0/0:17,0:17:38.16:0,38,528	1/1:3,13:17:43.89:612,44,0	1/1:2,5:8:9.02:109,9,0	0/0:16,0:16:42.13:0,42,603	0/0:13,0:13:29.08:0,29,364	0/0:26,0:26:61.09:0,61,895	0/0:15,0:15:28.78:0,29,378	0/0:13,0:13:27.97:0,28,388	0/0:22,0:22:60.17:0,60,847	0/0:12,0:12:33.08:0,33,465	1/1:1,3:6:15.04:206,15,0	0/0:10,0:10:22.63:0,23,323	0/0:33,0:33:77:0,77,1059	0/0:15,0:15:36.54:0,37,512	0/0:13,0:13:27.09:0,27,377	0/0:26,0:26:59.79:0,60,894	0/0:12,0:12:27.03:0,27,330	0/0:10,0:10:30.10:0,30,450	0/0:11,0:11:22.32:0,22,324	0/0:13,0:13:39.12:0,39,571
chr10	20986545	.	C	CGT	909.24	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-0.322;DP=419;FS=8.950;HRun=0;HaplotypeScore=74.7608;InbreedingCoeff=0.8928;MQ=72.33;MQ0=0;MQRankSum=1.450;QD=18.56;ReadPosRankSum=-0.413;VQSLOD=3.0757;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:36:0,36,519	1/1:4,1:5:5.96:51,6,0	0/0:15,0:13:5.53:0,6,246	0/0:15,0:14:7.21:0,7,254	1/1:3,10:13:21.03:292,21,0	0/0:10,0:10:21.07:0,21,320	0/0:28,0:28:62.76:0,63,924	0/0:12,0:12:33.06:0,33,434	0/0:17,0:17:38.93:0,39,545	1/1:15,1:16:19.31:528,19,0	1/1:8,1:9:5.97:81,6,0	0/0:16,0:16:45:0,45,613	0/0:13,0:13:30.07:0,30,391	0/0:27,0:27:60.91:0,61,890	0/0:15,0:15:29.77:0,30,386	0/0:13,0:13:28.32:0,28,384	0/0:21,0:21:63.16:0,63,858	0/0:12,0:12:33.11:0,33,475	1/1:6,0:6:13.14:118,13,0	0/0:10,0:10:23.18:0,23,326	0/0:32,0:32:77.24:0,77,1081	0/0:14,0:14:36.54:0,37,513	0/0:12,0:12:27.08:0,27,367	0/0:25,0:25:60.16:0,60,884	0/0:10,0:10:27.03:0,27,330	0/0:10,0:10:30.10:0,30,450	0/0:11,0:11:22.89:0,23,326	0/0:13,0:13:39.12:0,39,572
chr10	20987179	.	T	TA	2304.27	PASS	AB=0.845;AC=20;AF=0.357;AN=56;BaseQRankSum=-9.356;DP=481;FS=1.491;HRun=11;HaplotypeScore=85.1356;InbreedingCoeff=0.3709;MQ=70.84;MQ0=0;MQRankSum=-0.731;QD=9.11;ReadPosRankSum=-1.845;VQSLOD=2.5925;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:17.32:0,17,112	1/1:0,5:5:15.03:152,15,0	0/0:9,0:9:14.32:0,14,100	0/1:8,0:9:13.77:40,0,14	0/1:7,21:29:9.81:431,0,10	0/1:21,2:23:9.07:9,0,192	0/0:17,0:17:39.28:0,39,195	0/0:26,0:26:30.33:0,30,146	0/0:9,0:9:11.37:0,11,61	1/1:6,10:16:3.81:220,4,0	1/1:4,11:16:32.90:319,33,0	0/1:11,1:12:31.17:31,0,56	0/0:10,0:10:13.85:0,14,81	0/0:16,0:16:20.23:0,20,113	0/1:13,2:15:3.55:4,0,159	1/1:4,14:18:15.84:342,16,0	1/1:6,17:23:4.63:410,5,0	1/1:3,11:15:32.90:319,33,0	0/1:5,9:15:16.54:198,0,17	0/0:19,0:19:14.83:0,15,84	0/0:6,0:6:11.34:0,11,57	0/0:13,0:12:17.71:0,18,96	0/0:13,0:13:31.20:0,31,157	0/0:12,0:12:15.95:0,16,89	0/1:26,0:26:5.15:5,0,110	0/1:30,1:31:5.53:6,0,172	0/0:32,0:32:50.82:0,51,280	0/0:21,0:21:26.62:0,27,142
chr10	20987345	.	CA	C	5128.47	PASS	AB=0.598;AC=32;AF=0.571;AN=56;BaseQRankSum=-4.799;DP=617;FS=2.804;HRun=9;HaplotypeScore=86.7542;InbreedingCoeff=0.8364;MQ=60.41;MQ0=27;MQRankSum=1.742;QD=16.13;ReadPosRankSum=4.307;VQSLOD=5.2036;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,17:20:48.01:434,48,0	0/0:4,0:9:14.24:0,14,72	0/0:67,1:18:21.67:0,22,229	0/0:60,0:18:34.45:0,34,278	0/0:3,0:23:46.42:0,46,231	1/1:6,19:25:46.06:394,46,0	1/1:4,10:14:32.39:282,32,0	1/1:14,14:28:21.72:336,22,0	1/1:8,16:23:33.92:292,34,0	0/0:3,0:11:22.85:0,23,115	0/0:6,0:22:48.07:0,48,310	1/1:7,8:15:26.79:222,27,0	1/1:6,10:16:14.69:247,15,0	1/1:5,16:21:50.50:441,51,0	0/0:16,0:16:37.78:0,38,391	0/0:16,1:17:19.70:0,20,460	0/0:28,0:27:66.19:0,66,760	0/0:14,0:14:33.05:0,33,356	0/0:9,0:27:55.81:0,56,311	0/1:4,11:15:1.28:263,0,1	1/1:3,10:13:8.55:200,9,0	0/1:5,8:12:10.13:117,0,10	1/1:1,11:12:33.02:301,33,0	1/1:5,12:17:6.01:243,6,0	1/1:7,9:16:30.76:257,31,0	1/1:5,19:26:32.49:468,32,0	1/1:7,27:34:68.67:603,69,0	1/1:5,3:8:2.99:27,3,0
chr10	20989536	.	CA	C	1623.72	PASS	AB=0.864;AC=34;AF=0.607;AN=56;BaseQRankSum=1.894;DP=442;FS=3.141;HRun=2;HaplotypeScore=81.2788;InbreedingCoeff=0.7405;MQ=74.07;MQ0=2;MQRankSum=-0.176;QD=6.57;ReadPosRankSum=0.057;VQSLOD=0.7544;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:20,5:27:38.16:315,38,0	0/0:10,0:10:17.96:0,18,183	0/1:20,0:15:4.04:4,0,127	0/0:27,0:21:13.40:0,13,221	0/0:14,0:15:42.01:0,42,376	1/1:9,1:11:11.96:106,12,0	1/1:14,7:22:35.46:339,35,0	1/1:11,0:12:15.19:97,15,0	1/1:11,2:13:5.99:59,6,0	0/0:18,0:18:41.01:0,41,351	0/0:12,0:12:27.02:0,27,250	1/1:13,0:13:11.98:97,12,0	1/1:6,1:8:5.99:51,6,0	1/1:13,1:15:17.45:141,17,0	0/0:20,0:20:52.04:0,52,628	0/0:22,0:22:50.10:0,50,322	0/0:19,0:18:43.99:0,44,294	0/0:29,0:29:62.04:0,62,414	0/0:22,0:22:59.03:0,59,528	1/1:9,0:11:8.77:51,9,0	1/1:11,1:13:7.91:42,8,0	1/1:7,1:9:11.85:81,12,0	1/1:6,1:7:5.99:49,6,0	1/1:15,4:19:17.98:182,18,0	1/1:10,0:10:8.94:67,9,0	0/1:12,4:17:27.43:27,0,42	1/1:10,2:12:11.03:92,11,0	1/1:5,1:6:0.13:34,0,0
chr10	20989538	.	AGG	A	1219.04	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-3.111;DP=420;FS=33.765;HRun=11;HaplotypeScore=75.5532;InbreedingCoeff=0.7069;MQ=74.28;MQ0=2;MQRankSum=0.825;QD=17.41;ReadPosRankSum=8.066;VQSLOD=-0.3484;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:15.87:0,16,199	0/0:9,0:9:9.03:0,9,138	0/0:20,0:15:16.43:0,16,179	0/0:30,0:24:34.46:0,34,393	0/0:13,0:15:6.01:0,6,57	0/0:10,0:10:22.19:0,22,197	0/0:17,0:17:32.43:0,32,304	0/0:20,0:20:15:0,15,145	0/0:11,0:11:21.47:0,21,222	0/0:9,0:16:21.02:0,21,222	0/0:9,0:14:6.01:0,6,57	0/0:9,0:9:18.05:0,18,173	0/0:9,0:9:15.90:0,16,170	0/0:13,0:13:31.13:0,31,310	0/0:22,0:23:50.62:0,51,684	1/1:2,21:23:45.10:479,45,0	1/1:5,12:17:26.99:337,27,0	1/1:4,25:29:51.12:543,51,0	0/0:12,0:22:8.97:0,9,220	0/0:7,0:7:7.89:0,8,52	0/0:10,0:9:7.75:0,8,123	0/0:9,0:9:5.59:0,6,68	0/0:5,0:5:6.02:0,6,84	0/0:16,0:16:30.90:0,31,328	0/0:5,0:5:2.99:0,3,24	0/0:17,0:18:20.82:0,21,181	0/0:16,0:16:29.89:0,30,303	0/0:3,0:3:5.98:0,6,66
chr10	20990240	.	C	CATAT	6245.89	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-4.392;DP=744;FS=1.342;HRun=0;HaplotypeScore=211.5081;InbreedingCoeff=0.9798;MQ=72.17;MQ0=0;MQRankSum=-7.083;QD=31.71;ReadPosRankSum=0.750;VQSLOD=4.7564;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,105,1823	1/1:2,5:8:12.04:286,12,0	0/0:19,0:16:11.65:0,12,180	0/0:27,0:21:16.17:0,16,174	1/1:5,25:33:47.61:1097,48,0	0/0:30,0:30:81.23:0,81,1324	0/0:23,0:23:66.20:0,66,1073	0/0:36,0:36:90.28:0,90,1464	0/0:20,0:20:45.15:0,45,782	1/1:7,29:38:84.16:1840,84,0	1/1:5,26:31:27.09:689,27,0	0/0:33,0:33:90.23:0,90,1415	0/0:22,0:22:57.18:0,57,955	0/0:21,0:21:57.17:0,57,938	0/0:33,0:33:99:0,99,1668	1/1:4,0:28:39.13:680,39,0	1/1:7,0:22:18.06:318,18,0	1/1:2,0:12:12.01:182,12,0	1/1:8,16:25:54.16:1154,54,0	0/0:30,0:30:75.11:0,75,1233	0/0:23,0:23:54.13:0,54,869	0/0:36,0:36:99:0,99,1641	0/0:26,0:26:72.23:0,72,1217	0/0:18,0:18:45.13:0,45,741	0/0:32,0:32:84.28:0,84,1422	0/0:38,0:38:99:0,99,1632	0/0:34,0:34:93.30:0,93,1582	0/0:7,0:7:21.07:0,21,368
chr10	20991222	.	T	TA	12240.95	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-3.770;DP=682;FS=0.775;HRun=9;HaplotypeScore=102.3779;InbreedingCoeff=0.9828;MQ=75.53;MQ0=0;MQRankSum=-1.520;QD=23.14;ReadPosRankSum=2.207;VQSLOD=4.9478;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,41:50:58.39:849,58,0	0/0:5,0:5:15:0,15,130	0/0:16,0:17:22.85:0,23,242	0/0:7,0:9:11.90:0,12,81	0/0:25,0:25:50.94:0,51,439	1/1:3,19:22:22.08:472,22,0	1/1:6,22:28:40.18:670,40,0	1/1:4,15:20:19.01:417,19,0	1/1:4,24:28:63.17:697,63,0	0/0:31,0:31:74.98:0,75,650	0/0:16,0:16:41.94:0,42,358	1/1:6,27:33:66.18:730,66,0	1/1:6,19:25:51.14:564,51,0	1/1:2,22:24:54.15:597,54,0	0/0:26,0:26:65.95:0,66,569	1/1:9,26:35:26.57:745,27,0	1/1:5,33:38:73.20:1028,73,0	1/1:3,28:31:55.16:836,55,0	0/0:24,0:24:56.98:0,57,495	1/1:5,21:26:51.11:552,51,0	1/1:7,19:25:43.36:468,43,0	1/1:3,10:13:27.06:292,27,0	1/1:1,10:11:18.05:199,18,0	1/1:0,38:39:99:1195,108,0	1/1:2,13:16:28.31:295,28,0	1/1:2,23:25:69.18:755,69,0	1/1:5,29:34:29.73:748,30,0	1/1:0,5:5:12.03:133,12,0
chr10	20992792	.	CAG	C	3034.59	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=10.603;DP=561;FS=1.524;HRun=0;HaplotypeScore=66.5609;InbreedingCoeff=0.9620;MQ=74.62;MQ0=0;MQRankSum=-1.764;QD=38.90;ReadPosRankSum=-1.233;VQSLOD=5.1819;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:87.24:0,87,1616	1/1:1,13:14:33.11:505,33,0	0/0:21,0:19:36.24:0,36,911	0/0:22,0:20:54.86:0,55,1028	1/1:0,15:15:45.15:688,45,0	0/0:17,0:17:51.17:0,51,985	0/0:14,0:14:42.14:0,42,800	0/0:25,0:25:72.24:0,72,1343	0/0:26,0:26:75.24:0,75,1369	1/1:0,13:13:39.13:597,39,0	1/1:0,17:17:42.14:642,42,0	0/0:23,0:23:69.20:0,69,1296	0/0:19,0:19:57.18:0,57,1057	0/0:32,0:32:90.31:0,90,1696	0/0:30,0:30:90.31:0,90,1701	0/0:26,0:26:75.24:0,75,1401	0/0:20,0:20:60.21:0,60,1125	0/0:26,0:26:75.24:0,75,1396	1/1:1,18:19:51.17:776,51,0	0/0:18,0:18:51.16:0,51,952	0/0:17,0:17:51.16:0,51,944	0/0:12,0:12:36.12:0,36,695	0/0:15,0:15:42.14:0,42,809	0/0:19,0:19:54.19:0,54,1042	0/0:19,0:19:57.20:0,57,1094	0/0:23,2:25:3.62:0,4,1135	0/0:19,0:19:57.17:0,57,1054	0/0:7,0:7:17.85:0,18,347
chr10	20992915	.	T	TA	9606.80	PASS	AB=0.808;AC=48;AF=0.857;AN=56;BaseQRankSum=-8.910;DP=558;FS=4.310;HRun=10;HaplotypeScore=58.6566;InbreedingCoeff=0.6842;MQ=80.63;MQ0=0;MQRankSum=-0.847;QD=20.22;ReadPosRankSum=4.998;VQSLOD=5.6101;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,18:25:26.69:481,27,0	1/1:4,8:12:21.05:224,21,0	0/0:25,0:23:26.20:0,26,195	0/1:17,0:15:7.50:7,0,115	1/1:7,11:18:25.71:367,26,0	1/1:6,25:31:66.16:702,66,0	1/1:4,15:19:32.52:351,33,0	0/0:33,0:33:77.81:0,78,632	1/1:2,8:10:2.79:203,3,0	1/1:6,14:20:14.44:350,14,0	1/1:8,11:19:30.07:319,30,0	1/1:2,10:12:24.06:256,24,0	1/1:5,14:19:14.45:359,14,0	1/1:2,15:17:23.48:455,23,0	0/0:25,0:25:65.89:0,66,539	1/1:4,18:22:41.63:447,42,0	1/1:4,24:28:47.54:711,48,0	1/1:3,13:16:16.70:361,17,0	1/1:2,13:15:38.09:372,38,0	1/1:4,21:26:41.21:590,41,0	1/1:3,6:9:18.05:192,18,0	1/1:7,13:20:22.42:337,22,0	1/1:3,13:17:17.09:361,17,0	1/1:1,12:13:36.09:384,36,0	1/1:5,15:20:36.09:384,36,0	1/1:8,21:29:63.09:643,63,0	1/1:6,26:33:59.32:666,59,0	0/1:3,5:8:12.55:84,0,13
chr10	20995134	.	GA	G	1510.18	PASS	AB=0.900;AC=11;AF=0.196;AN=56;BaseQRankSum=11.286;DP=681;FS=13.783;HRun=11;HaplotypeScore=90.5982;InbreedingCoeff=0.7327;MQ=74.20;MQ0=0;MQRankSum=-2.058;QD=10.00;ReadPosRankSum=2.378;VQSLOD=1.3405;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:45.11:0,45,480	0/0:10,0:10:4.66:0,5,6	0/0:22,1:23:7.48:0,7,197	0/0:11,0:10:8.23:0,8,64	1/1:26,0:26:3.77:8,4,0	0/0:26,0:29:68.67:0,69,683	0/0:20,1:21:29.27:0,29,481	0/0:27,1:28:44.53:0,45,679	0/0:23,0:23:26.60:0,27,474	0/0:27,0:27:2.88:0,3,22	0/0:26,0:26:6.60:0,7,9	0/0:22,1:23:26.46:0,26,474	0/0:25,0:26:44.69:0,45,609	0/0:24,0:24:61.02:0,61,632	0/0:19,0:31:64.70:0,65,544	1/1:5,34:41:96.83:775,97,0	1/1:1,21:22:56.93:468,57,0	1/1:5,20:25:21.95:387,22,0	1/1:19,0:19:5.07:18,5,0	0/0:29,1:31:56.38:0,56,782	0/0:17,1:18:29.48:0,29,508	0/0:28,0:28:84.15:0,84,865	0/0:30,0:32:72.08:0,72,724	0/1:16,2:18:13.20:13,0,284	0/0:19,1:21:35.27:0,35,541	0/0:38,0:39:99:0,100,1022	0/0:32,0:32:84.19:0,84,880	0/0:7,0:7:21.04:0,21,216
chr10	20995144	.	AAC	A	3205.90	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=7.337;DP=673;FS=0.391;HRun=0;HaplotypeScore=95.4651;InbreedingCoeff=0.9945;MQ=71.38;MQ0=0;MQRankSum=-1.039;QD=31.13;ReadPosRankSum=-1.224;VQSLOD=5.1213;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:57.15:0,57,864	1/1:0,9:9:24.55:330,25,0	0/0:19,0:18:35.99:0,36,585	0/0:11,0:10:14.11:0,14,164	1/1:3,23:26:66.92:765,67,0	0/0:25,0:25:75.22:0,75,1143	0/0:21,0:21:50.92:0,51,785	0/0:31,0:31:90.11:0,90,1322	0/0:21,0:21:57.02:0,57,885	1/1:1,27:28:75.16:927,75,0	1/1:0,22:22:62.93:753,63,0	0/0:20,0:20:54:0,54,801	0/0:22,0:22:63.12:0,63,981	0/0:26,0:26:53.58:0,54,1090	0/0:30,0:30:78.17:0,78,1016	0/0:41,0:41:91:0,91,601	0/0:22,0:22:57.59:0,58,307	0/0:22,0:22:54.85:0,55,330	1/1:3,15:18:53.80:607,54,0	0/0:33,0:33:95.98:0,96,1383	0/0:21,0:21:62.97:0,63,875	0/0:31,0:31:87.20:0,87,1291	0/0:32,0:32:84.19:0,84,1277	0/0:17,0:17:47.83:0,48,624	0/0:25,0:25:65.31:0,65,972	0/0:40,1:41:79.26:0,79,1752	0/0:32,0:32:93.27:0,93,1461	0/0:8,0:8:23.99:0,24,339
chr10	20995695	.	AC	A	15844.72	PASS	AB=0.931;AC=35;AF=0.625;AN=56;BaseQRankSum=-0.391;DP=624;FS=1.024;HRun=1;HaplotypeScore=94.9190;InbreedingCoeff=0.9406;MQ=62.54;MQ0=1;MQRankSum=0.074;QD=36.42;ReadPosRankSum=-0.151;VQSLOD=4.7394;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,31:31:90.30:1259,90,0	0/0:10,0:10:27.08:0,27,408	0/0:10,0:10:17.26:0,17,215	0/0:7,0:6:8.94:0,9,113	0/0:25,0:25:66.21:0,66,1019	1/1:0,30:30:75.25:1049,75,0	1/1:1,25:26:63.18:880,63,0	1/1:0,22:22:66.22:922,66,0	1/1:0,32:32:93.31:1301,93,0	0/0:24,0:24:72.25:0,72,1146	0/0:19,0:19:51.17:0,51,815	1/1:0,16:16:42.14:587,42,0	1/1:0,25:25:69.23:964,69,0	1/1:0,27:27:78.26:1091,78,0	0/0:23,0:23:66.22:0,66,1051	0/1:25,2:27:2.66:3,0,1091	0/0:30,0:30:90.31:0,90,1433	0/0:21,0:21:63.21:0,63,1006	0/0:19,0:19:54.14:0,54,795	1/1:0,17:17:51.17:713,51,0	1/1:0,23:23:69.23:964,69,0	1/1:0,18:18:48.16:668,48,0	1/1:0,20:20:48.16:671,48,0	1/1:0,29:29:81.27:1133,81,0	1/1:0,26:26:72.24:1007,72,0	1/1:1,28:29:39.31:1124,39,0	1/1:0,24:24:69.23:964,69,0	1/1:0,13:13:39.13:545,39,0
chr10	20996943	.	A	ATTCTTGGTCACTG	66894.58	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=1.383;DP=595;FS=1.085;HRun=0;HaplotypeScore=266.2960;InbreedingCoeff=0.9566;MQ=75.08;MQ0=0;MQRankSum=-12.050;QD=127.42;ReadPosRankSum=2.666;VQSLOD=4.6716;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,17:32:78.27:4209,78,0	1/1:5,5:10:24.55:1438,25,0	0/0:29,0:28:68.20:0,68,2043	0/0:25,0:24:63.15:0,63,2112	1/1:15,8:23:60.20:2841,60,0	1/1:15,3:18:39.13:1935,39,0	1/1:21,5:26:69.13:3436,69,0	1/1:29,4:37:99:4874,108,0	1/1:8,7:16:45.02:2412,45,0	1/1:12,7:22:63.21:3201,63,0	1/1:9,3:13:27.09:1119,27,0	1/1:15,8:24:54.19:2761,54,0	1/1:11,13:27:60.14:3294,60,0	1/1:13,14:29:72.25:4430,72,0	0/0:16,0:16:48.15:0,48,1800	1/1:6,15:23:57.20:3735,57,0	1/1:8,9:19:42.14:2408,42,0	1/1:7,6:17:30.10:1763,30,0	1/1:11,2:13:36.12:1759,36,0	1/1:6,9:15:42.14:2074,42,0	1/1:7,7:16:30.10:1783,30,0	1/1:10,11:21:5.99:3193,6,0	1/1:5,7:13:30.10:1608,30,0	1/1:16,16:33:62.69:3221,63,0	1/1:10,10:22:57.66:2926,58,0	1/1:16,13:29:75.26:3976,75,0	1/1:12,3:18:39.13:1623,39,0	1/1:8,1:9:15.05:875,15,0
chr10	20996965	.	GCACACACACACA	G	6080.37	PASS	AB=0.839;AC=27;AF=0.540;AN=50;BaseQRankSum=5.940;DP=547;FS=4.260;HRun=0;HaplotypeScore=297.9536;InbreedingCoeff=0.7228;MQ=56.07;MQ0=13;MQRankSum=-8.273;QD=22.35;ReadPosRankSum=3.425;VQSLOD=2.6781;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:31,3:35:12.04:321,12,0	0/0:9,0:12:11.70:0,12,465	0/0:30,0:17:0:0,0,0	./.	0/0:16,0:15:12.04:0,12,486	1/1:8,3:11:6.02:207,6,0	1/1:17,7:25:24.08:779,24,0	0/0:23,0:22:0:0,0,0	1/1:11,4:17:18:581,18,0	0/0:15,0:17:21.07:0,21,823	0/0:10,0:14:15.05:0,15,518	1/1:12,6:19:24.08:710,24,0	1/1:17,4:21:12.04:410,12,0	1/1:16,6:22:24.08:803,24,0	0/0:17,0:16:27.09:0,27,1422	0/0:24,0:30:36.12:0,36,1861	0/0:23,0:27:27.56:0,28,1259	0/0:16,0:19:41.17:0,41,1977	./.	1/1:10,1:11:3.01:103,3,0	0/0:26,0:25:3:0,3,25	1/1:20,2:22:9.03:266,9,0	./.	1/1:22,9:32:14.76:430,15,0	1/1:13,2:15:6.02:206,6,0	0/1:21,3:25:99:458,0,104	1/1:5,5:10:18.06:619,18,0	1/1:1,1:3:6.02:187,6,0
chr10	20997444	.	CACGTTCGGTTTGGG	C	16342.21	PASS	AB=0.706;AC=33;AF=0.589;AN=56;BaseQRankSum=10.443;DP=520;FS=11.241;HRun=0;HaplotypeScore=249.6441;InbreedingCoeff=0.8764;MQ=71.11;MQ0=0;MQRankSum=-15.058;QD=59.43;ReadPosRankSum=6.390;VQSLOD=2.7157;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,17:26:44.22:1194,44,0	0/0:8,0:8:24.08:0,24,1280	0/0:13,0:13:35.99:0,36,1673	0/0:11,0:11:30.10:0,30,1303	0/0:20,0:20:51.16:0,51,2818	1/1:5,10:15:33.96:1181,34,0	1/1:7,22:29:42.38:1566,42,0	1/1:13,2:15:24.79:326,25,0	1/1:3,10:13:18.80:735,19,0	0/0:17,0:17:45.12:0,45,2226	0/0:16,0:16:36.59:0,37,1968	1/1:3,26:29:70.25:2801,70,0	1/1:6,15:21:34.46:1345,34,0	1/1:8,10:18:35.72:1419,36,0	0/0:20,0:20:60.20:0,60,3831	0/0:18,0:18:48.15:0,48,3017	0/0:50,0:50:99:0,150,9076	0/0:49,0:49:99:0,147,8249	0/0:23,0:23:60.20:0,60,2782	1/1:4,4:8:14.26:522,14,0	1/1:6,9:15:10.57:353,11,0	1/1:6,6:12:14.86:597,15,0	1/1:6,1:7:0.25:119,0,0	1/1:3,15:18:28.20:907,28,0	1/1:8,6:14:32.10:865,32,0	0/1:7,5:12:99:779,0,178	1/1:8,9:17:32.90:1028,33,0	1/1:1,5:6:15.05:604,15,0
chr10	20998471	.	C	CT	14194.05	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-4.917;DP=718;FS=1.297;HRun=6;HaplotypeScore=115.0009;InbreedingCoeff=0.9994;MQ=84.40;MQ0=0;MQRankSum=-3.373;QD=31.61;ReadPosRankSum=2.001;VQSLOD=3.7875;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,47:51:99:1471,117,0	0/0:16,0:16:45.10:0,45,459	0/0:22,0:22:54.10:0,54,542	0/0:25,0:25:45.12:0,45,528	0/0:23,0:23:63.14:0,63,641	1/1:3,21:24:57.18:717,57,0	1/1:0,17:17:45.14:566,45,0	1/1:3,32:35:96.29:1191,96,0	1/1:3,20:23:54.17:679,54,0	0/0:23,0:23:60.13:0,60,612	0/0:20,0:20:54.12:0,54,551	1/1:1,17:18:51.16:641,51,0	1/1:4,23:27:63.20:792,63,0	1/1:3,26:29:69.22:867,69,0	0/0:26,0:26:69.14:0,69,697	0/0:30,0:30:84.19:0,84,857	0/0:31,0:31:87.17:0,87,878	0/0:22,0:22:54.08:0,54,540	0/0:31,0:31:90.17:0,90,903	1/1:2,21:23:60.19:755,60,0	1/1:4,30:34:81.26:1019,81,0	1/1:1,26:27:69.22:864,69,0	1/1:0,26:26:69.09:868,69,0	1/1:1,28:29:81.26:1019,81,0	1/1:0,18:18:45.14:566,45,0	1/1:3,34:37:77.80:1272,78,0	1/1:3,19:22:51.16:641,51,0	1/1:0,9:9:21.07:264,21,0
chr10	20999340	.	A	ATGT	33269.80	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=7.529;DP=665;FS=22.659;HRun=0;HaplotypeScore=165.2937;InbreedingCoeff=0.9961;MQ=78.83;MQ0=0;MQRankSum=-12.521;QD=57.66;ReadPosRankSum=4.400;VQSLOD=3.8581;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,30:37:90.31:2119,90,0	1/1:0,6:6:18.06:425,18,0	0/0:32,0:32:90.24:0,90,1546	0/0:27,0:27:41.92:0,42,882	1/1:3,17:20:57.02:1066,57,0	1/1:2,14:18:42.14:991,42,0	1/1:4,20:24:63.13:1385,63,0	1/1:10,19:29:84.29:1938,84,0	1/1:3,24:28:72.25:1666,72,0	1/1:5,21:27:75.18:1661,75,0	1/1:4,12:16:33.07:724,33,0	1/1:5,23:27:63.18:1436,63,0	1/1:2,21:25:69.24:1623,69,0	1/1:3,27:33:84.29:1944,84,0	0/0:29,0:29:87.30:0,87,1520	1/1:4,28:35:87.26:1999,87,0	1/1:3,17:22:54.19:1262,54,0	1/1:4,9:13:33.11:743,33,0	1/1:5,15:21:45.15:1028,45,0	1/1:3,18:22:54.18:1240,54,0	1/1:5,23:29:60.16:1362,60,0	1/1:4,18:22:63.17:1350,63,0	1/1:3,11:14:33.11:775,33,0	1/1:5,17:22:47.87:1042,48,0	1/1:2,18:21:48.12:1082,48,0	1/1:1,26:27:78.27:1842,78,0	1/1:3,26:29:87.26:2001,87,0	1/1:0,8:9:24.08:567,24,0
chr10	20999507	.	CAG	C	4743	PASS	AB=1.000;AC=48;AF=0.889;AN=54;BaseQRankSum=0.276;DP=437;FS=11.268;HRun=0;HaplotypeScore=69.3775;InbreedingCoeff=0.5907;MQ=46.94;MQ0=50;MQRankSum=-3.120;QD=12.72;ReadPosRankSum=-0.603;VQSLOD=3.5540;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:23:35.85:280,36,0	1/1:8,0:8:14.91:115,15,0	0/0:30,0:11:29.12:0,29,230	0/1:35,0:12:32.49:74,0,32	1/1:14,0:13:26.64:198,27,0	1/1:9,0:7:14.77:101,15,0	1/1:16,0:12:14.87:110,15,0	1/1:21,0:19:53.77:438,54,0	1/1:8,0:8:11.86:84,12,0	1/1:16,0:13:38.92:340,39,0	./.	0/1:17,0:12:21.10:46,0,21	1/1:9,0:8:23.44:152,23,0	1/1:17,0:16:14.88:115,15,0	0/0:27,0:26:26.11:0,26,376	1/1:17,0:16:26.72:194,27,0	1/1:16,0:15:38.64:278,39,0	1/1:12,0:11:23.75:163,24,0	1/1:9,0:7:20.82:152,21,0	1/1:14,0:10:26.83:205,27,0	1/1:22,0:19:35.61:275,36,0	1/1:9,0:8:17.86:134,18,0	1/1:13,0:13:29.86:234,30,0	1/1:13,0:11:14.93:123,15,0	1/1:11,0:10:23.66:162,24,0	1/1:15,0:15:41.85:341,42,0	1/1:16,0:15:35.65:251,36,0	1/1:9,0:8:23.84:179,24,0
chr10	20999658	.	TC	T	14326.47	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=9.731;DP=608;FS=8.733;HRun=6;HaplotypeScore=269.8875;InbreedingCoeff=0.9919;MQ=69.58;MQ0=0;MQRankSum=-11.222;QD=27.34;ReadPosRankSum=4.586;VQSLOD=0.6218;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,40:40:87.21:934,87,0	1/1:1,6:7:15.04:161,15,0	0/0:29,1:29:75.13:0,75,951	0/0:21,0:21:20.98:0,21,496	1/1:2,21:23:63.16:676,63,0	1/1:4,16:20:48.12:516,48,0	1/1:3,21:24:69.17:733,69,0	1/1:6,16:22:45.10:483,45,0	1/1:2,17:19:54.12:571,54,0	1/1:1,29:30:87.22:932,87,0	1/1:2,13:15:39.10:419,39,0	1/1:0,17:17:51.13:548,51,0	1/1:0,28:27:66.16:707,66,0	1/1:4,28:31:78.19:837,78,0	0/0:33,0:33:90.27:0,90,1152	1/1:3,24:27:78.18:830,78,0	1/1:1,18:19:51.13:547,51,0	1/1:1,16:17:42.06:439,42,0	1/1:3,19:22:60.12:634,60,0	1/1:4,13:17:39.08:411,39,0	1/1:1,12:12:27.05:281,27,0	1/1:3,17:20:57.14:610,57,0	1/1:2,16:18:48.12:515,48,0	1/1:2,18:20:29.60:321,30,0	1/1:1,20:21:60.15:644,60,0	1/1:2,19:21:57.14:612,57,0	1/1:0,22:21:63.16:674,63,0	1/1:0,9:9:27.07:290,27,0
chr10	20999672	.	CAG	C	4307.70	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=13.999;DP=427;FS=14.047;HRun=0;HaplotypeScore=278.1135;InbreedingCoeff=0.9327;MQ=88.93;MQ0=0;MQRankSum=-14.482;QD=12.74;ReadPosRankSum=9.156;VQSLOD=3.1236;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,26:29:54.27:298,54,0	1/1:0,5:5:11.57:66,12,0	0/0:31,0:31:76:0,76,1511	0/0:25,0:25:63.16:0,63,1188	1/1:4,12:16:10.27:167,10,0	1/1:3,9:12:25.07:164,25,0	1/1:1,15:16:45.63:260,46,0	1/1:0,7:7:19.04:90,19,0	1/1:2,13:15:21.40:191,21,0	1/1:4,11:15:25.46:186,25,0	1/1:1,12:13:23.68:161,24,0	1/1:2,11:13:18.83:150,19,0	1/1:2,14:16:40.19:216,40,0	1/1:4,17:21:45.23:255,45,0	0/0:33,0:33:96.31:0,96,1885	1/1:3,15:18:41.40:231,41,0	1/1:1,12:13:25.67:176,26,0	1/1:1,7:8:17.15:94,17,0	1/1:1,13:14:39.84:227,40,0	1/1:2,8:10:19.47:124,19,0	1/1:0,5:5:8.29:41,8,0	1/1:1,9:11:22.06:135,22,0	1/1:3,11:14:31.53:176,32,0	1/1:1,11:12:21.87:111,22,0	1/1:3,12:15:41.17:220,41,0	1/1:1,13:14:39.99:232,40,0	1/1:4,13:17:22.61:213,23,0	1/1:0,8:8:22.38:125,22,0
chr10	20999678	.	AAACCG	A	13455.24	PASS	AB=0.621;AC=42;AF=0.750;AN=56;BaseQRankSum=16.652;DP=500;FS=14.561;HRun=0;HaplotypeScore=303.2373;InbreedingCoeff=0.2531;MQ=86.57;MQ0=0;MQRankSum=-10.835;QD=32.74;ReadPosRankSum=10.589;VQSLOD=3.1144;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:8,26:34:42.03:1080,42,0	0/1:2,5:7:20.63:176,0,21	0/0:29,0:29:83.58:0,84,2306	0/0:29,0:29:78.27:0,78,2384	1/1:6,12:18:32.42:592,32,0	1/1:3,9:12:26.14:459,26,0	1/1:5,15:20:10.25:691,10,0	0/1:11,7:18:94.06:321,0,94	1/1:4,13:17:33.54:660,34,0	1/1:4,11:15:24.29:573,24,0	1/1:2,12:14:13.90:511,14,0	1/1:1,11:12:22.07:531,22,0	0/1:6,14:20:12.33:618,0,12	1/1:8,17:24:4.55:734,5,0	0/0:31,0:31:93.32:0,93,2980	1/1:3,15:18:8.35:712,8,0	1/1:3,12:15:31.87:589,32,0	0/1:8,7:15:39.67:292,0,40	0/1:3,13:16:0.91:632,0,1	1/1:3,8:11:18.55:377,19,0	0/1:5,5:9:2.67:173,0,3	1/1:3,10:13:18.37:469,18,0	1/1:8,11:19:19.84:592,20,0	1/1:9,11:20:0.65:401,1,0	1/1:5,12:16:20.93:643,21,0	0/1:6,13:19:6.52:617,0,7	0/1:5,13:18:4.86:601,0,5	1/1:0,8:8:24.08:411,24,0
chr10	20999683	.	G	GA	12166.75	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=13.423;DP=533;FS=21.781;HRun=1;HaplotypeScore=284.5754;InbreedingCoeff=0.9953;MQ=86.44;MQ0=0;MQRankSum=-14.404;QD=27.40;ReadPosRankSum=4.164;VQSLOD=0.4325;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:26,7:33:95.94:1014,96,0	1/1:6,2:8:24.03:284,24,0	0/0:26,0:27:76.75:0,77,931	0/0:31,0:31:84:0,84,1039	1/1:16,3:19:44.69:394,45,0	1/1:11,3:14:42.02:435,42,0	1/1:17,6:23:62.92:641,63,0	1/1:10,11:21:54.12:682,54,0	1/1:16,2:18:47.87:461,48,0	1/1:12,3:15:42:419,42,0	1/1:12,2:14:41.93:400,42,0	1/1:11,1:12:35.98:328,36,0	1/1:14,6:20:58.11:592,58,0	1/1:19,8:26:68.72:691,69,0	0/0:31,0:31:93.30:0,93,1206	1/1:19,3:22:53.95:509,54,0	1/1:13,3:16:47.91:469,48,0	1/1:7,7:14:42.11:532,42,0	1/1:15,3:18:48.07:502,48,0	1/1:10,3:13:35.92:348,36,0	1/1:6,5:10:17.75:174,18,0	1/1:11,3:14:38.98:385,39,0	1/1:12,7:19:51.36:517,51,0	1/1:12,10:22:43.55:459,44,0	1/1:15,4:18:46.81:442,47,0	1/1:15,6:21:60.04:643,60,0	1/1:18,5:22:60.03:621,60,0	1/1:8,0:8:23.99:225,24,0
chr10	20999689	.	G	GA	19024.14	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=12.345;DP=596;FS=24.146;HRun=2;HaplotypeScore=271.0913;InbreedingCoeff=0.9981;MQ=83.12;MQ0=0;MQRankSum=-13.441;QD=37.45;ReadPosRankSum=2.099;VQSLOD=-0.5101;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,34:37:99:1411,102,0	1/1:1,7:8:24.08:329,24,0	0/0:23,0:23:62.48:0,62,757	0/0:32,0:32:81.03:0,81,995	1/1:1,20:21:51.17:709,51,0	1/1:0,15:15:42.14:588,42,0	1/1:0,25:25:72.24:1010,72,0	1/1:0,27:27:81.26:1139,81,0	1/1:0,21:21:60.20:842,60,0	1/1:1,17:18:51.17:720,51,0	1/1:0,17:17:48.16:659,48,0	1/1:1,15:16:42.14:580,42,0	1/1:4,20:23:66.19:885,66,0	1/1:2,29:31:75.23:1009,75,0	0/0:33,0:33:99:0,99,1227	1/1:0,23:23:66.22:911,66,0	1/1:2,16:18:48.16:661,48,0	1/1:0,14:14:42.14:596,42,0	1/1:2,23:25:75.22:1039,75,0	1/1:1,13:14:39.13:537,39,0	1/1:2,11:12:27.09:369,27,0	1/1:0,17:17:45.15:630,45,0	1/1:3,18:21:51.64:690,52,0	1/1:1,22:23:45.62:627,46,0	1/1:1,19:19:57.18:777,57,0	1/1:0,24:24:72.21:999,72,0	1/1:0,26:25:69.23:971,69,0	1/1:0,8:8:24.08:336,24,0
chr10	21000404	.	TGG	T	4559.15	PASS	AB=1.000;AC=49;AF=0.875;AN=56;BaseQRankSum=5.431;DP=575;FS=16.349;HRun=4;HaplotypeScore=187.8235;InbreedingCoeff=0.7174;MQ=50.75;MQ0=9;MQRankSum=-3.991;QD=9.62;ReadPosRankSum=4.162;VQSLOD=0.3961;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:27:17.87:133,18,0	1/1:12,0:12:23.80:171,24,0	0/0:37,0:19:36.88:0,37,410	0/0:35,0:24:55.44:0,55,522	1/1:12,0:12:3.87:25,4,0	1/1:17,2:19:23.58:156,24,0	1/1:15,0:13:1.80:127,2,0	1/1:3,20:23:53.50:391,54,0	1/1:14,0:14:19.05:138,19,0	1/1:33,0:33:68.37:523,68,0	0/1:13,0:13:1.99:63,0,2	1/1:20,0:20:41.04:257,41,0	1/1:25,2:27:52.03:386,52,0	1/1:12,0:12:14.84:104,15,0	0/0:29,0:29:74.56:0,75,728	1/1:27,0:26:26.72:188,27,0	1/1:4,13:16:5.90:43,6,0	1/1:10,0:10:23.64:170,24,0	1/1:15,0:15:20.43:155,20,0	1/1:28,0:28:34.48:257,34,0	1/1:34,0:32:13.93:114,14,0	1/1:20,2:22:11.82:78,12,0	1/1:10,1:11:8.93:67,9,0	1/1:21,0:21:26.94:216,27,0	1/1:23,0:23:32.15:245,32,0	1/1:18,0:18:43.99:302,44,0	1/1:15,0:15:25.81:185,26,0	1/1:6,0:5:8.93:65,9,0
chr10	21000405	.	GGGGTGT	G	4396.92	PASS	AB=0.986;AC=42;AF=0.750;AN=56;BaseQRankSum=4.090;DP=574;FS=7.287;HRun=0;HaplotypeScore=216.4576;InbreedingCoeff=0.2025;MQ=50.94;MQ0=10;MQRankSum=-4.126;QD=9.26;ReadPosRankSum=4.492;VQSLOD=2.3636;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:22,1:24:15.79:116,16,0	1/1:12,0:12:1.67:108,2,0	0/0:37,0:19:36.83:0,37,410	0/0:34,0:23:55.48:0,55,523	0/1:13,0:13:18.36:18,0,44	1/1:18,0:18:23.58:156,24,0	0/1:14,1:13:17.11:126,0,17	1/1:23,0:23:53.50:391,54,0	1/1:14,0:14:23.73:168,24,0	0/1:34,0:34:63.58:411,0,64	0/1:13,0:13:1.54:63,0,2	1/1:19,1:20:39.71:287,40,0	1/1:27,0:27:58.12:476,58,0	1/1:12,0:12:10.78:83,11,0	0/0:28,0:28:74.70:0,75,1042	0/1:32,0:30:87.75:153,0,88	1/1:17,0:16:5.81:43,6,0	1/1:10,0:10:23.64:170,24,0	0/1:15,0:15:36.35:130,0,36	1/1:28,0:28:35.55:260,36,0	0/1:33,0:33:64.46:95,0,64	1/1:18,1:19:10.85:59,11,0	1/1:11,0:11:8.93:67,9,0	0/1:19,1:20:36.06:183,0,36	1/1:23,0:23:13.61:245,14,0	1/1:18,0:18:44.01:340,44,0	1/1:16,0:16:25.81:185,26,0	1/1:6,0:5:8.93:65,9,0
chr10	21000438	.	G	GTC	1656.09	PASS	AB=0.956;AC=22;AF=0.393;AN=56;BaseQRankSum=-1.784;DP=636;FS=29.900;HRun=0;HaplotypeScore=236.6005;InbreedingCoeff=-0.6450;MQ=36.03;MQ0=31;MQRankSum=3.571;QD=3.29;ReadPosRankSum=4.750;VQSLOD=0.8545;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:26,1:26:31.18:31,0,65	0/0:10,0:11:17.23:0,17,103	0/0:28,0:5:8.87:0,9,58	0/0:38,0:8:21.14:0,21,152	0/1:17,0:15:17.66:40,0,18	0/0:12,0:11:15.59:0,16,94	0/1:24,0:21:18.95:171,0,19	0/1:25,0:23:99:156,0,109	0/1:21,0:21:31.53:32,0,79	0/1:37,2:39:99:235,0,208	0/1:22,0:21:9.01:82,0,9	0/1:27,0:25:30.07:30,0,136	0/1:22,0:22:56.88:57,0,130	0/1:18,0:17:48.55:49,0,54	0/0:29,0:29:53.85:0,54,523	0/1:29,1:28:35.17:207,0,35	0/1:22,0:20:23.41:39,0,23	0/1:7,11:18:35.97:36,0,41	0/1:10,1:10:30.24:100,0,30	0/1:28,0:28:71.34:71,0,127	0/1:31,1:29:31.57:133,0,32	0/1:38,0:37:30.25:77,0,30	0/0:15,0:13:5.85:0,6,34	0/1:10,12:22:58.85:82,0,59	0/1:24,0:22:17.08:17,0,142	0/1:19,0:19:97.43:97,0,125	0/1:12,0:12:54.34:60,0,54	0/1:5,0:3:10.05:10,0,33
chr10	21000498	.	C	CTGTGTG	3615.16	PASS	AB=1.000;AC=40;AF=0.769;AN=52;BaseQRankSum=3.348;DP=587;FS=52.704;HRun=0;HaplotypeScore=206.6326;InbreedingCoeff=0.4813;MQ=39.96;MQ0=35;MQRankSum=-5.280;QD=8.49;ReadPosRankSum=0.007;VQSLOD=0.9157;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:12,0:11:0.14:0,0,0	1/1:11,0:11:8.91:92,9,0	0/1:60,0:9:2.41:2,0,31	0/0:90,0:15:6.83:0,7,51	1/1:12,0:12:7.68:93,8,0	1/1:9,0:8:5.02:79,5,0	0/1:16,0:15:0:0,0,0	1/1:28,0:17:6.21:37,6,0	1/1:15,0:15:19.74:275,20,0	1/1:34,0:32:29.06:520,29,0	0/0:12,5:18:0.01:0,0,1	1/1:18,0:18:11.02:206,11,0	1/1:19,0:19:35.80:511,36,0	1/1:9,0:9:9.79:93,10,0	0/0:32,0:32:48.83:0,49,995	1/1:19,0:19:10.04:87,10,0	./.	1/1:11,0:11:3.01:77,3,0	1/1:13,0:10:6.02:161,6,0	1/1:16,0:16:0.83:5,1,0	1/1:30,0:22:0.70:3,1,0	1/1:29,0:27:5.62:41,6,0	1/1:17,0:16:5.67:43,6,0	0/0:14,0:13:1.55:0,2,4	0/1:17,0:17:1.43:2,0,1	1/1:16,0:16:38.44:761,38,0	1/1:15,0:15:27.89:528,28,0	./.
chr10	21000503	.	T	TGTGTGA	5623.84	PASS	AB=0.824;AC=36;AF=0.692;AN=52;BaseQRankSum=3.608;DP=553;FS=54.683;HRun=0;HaplotypeScore=184.4312;InbreedingCoeff=0.4270;MQ=37.04;MQ0=45;MQRankSum=-1.922;QD=17.25;ReadPosRankSum=-0.372;VQSLOD=2.1298;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:8,0:7:0.09:0,0,0	1/1:8,3:11:9.01:148,9,0	0/0:62,0:9:6.99:0,7,175	0/0:81,0:10:12.69:0,13,162	1/1:10,3:13:10.67:153,11,0	1/1:4,5:8:6.74:113,7,0	0/0:3,12:14:0:0,0,0	0/1:21,0:15:37.89:135,0,38	1/1:9,5:14:22.80:410,23,0	0/1:13,16:31:39.21:799,0,39	0/0:17,1:17:0.12:0,0,2	1/1:12,3:15:24.54:344,25,0	1/1:12,6:19:38.71:733,39,0	1/1:5,2:7:9.88:147,10,0	0/0:32,0:31:66.16:0,66,1267	1/1:17,3:20:16.51:179,17,0	./.	1/1:11,0:11:3.01:98,3,0	0/1:6,6:9:2.95:275,0,3	1/1:15,3:18:7.64:57,8,0	1/1:26,1:19:1.74:24,2,0	1/1:25,2:25:17.74:187,18,0	1/1:8,6:13:5.56:61,6,0	0/0:14,0:13:1.55:0,2,4	1/1:15,2:17:6.95:51,7,0	1/1:9,7:16:31.03:959,31,0	1/1:9,6:15:36.91:751,37,0	./.
chr10	21000541	.	A	AGT	641.23	PASS	AB=0.840;AC=27;AF=0.675;AN=40;BaseQRankSum=3.620;DP=347;FS=17.265;HRun=0;HaplotypeScore=128.1643;InbreedingCoeff=0.2499;MQ=24.07;MQ0=136;MQRankSum=-4.291;QD=4.65;ReadPosRankSum=-0.008;VQSLOD=1.9866;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/0:2,2:4:1.82:0,2,5	./.	./.	./.	1/1:5,4:9:0.89:2,1,0	1/1:1,2:2:6.02:93,6,0	./.	0/1:5,0:4:0.03:0,0,0	0/1:12,2:14:11.90:116,0,12	1/1:8,1:9:0.45:1,0,0	0/1:4,4:8:6.69:12,0,7	1/1:10,3:13:14.64:143,15,0	./.	0/0:42,0:32:51.15:0,51,670	1/1:9,3:12:10.27:87,10,0	1/1:1,0:1:2.04:6,2,0	1/1:2,0:2:1.55:4,2,0	1/1:3,0:2:3.01:37,3,0	1/1:9,1:10:0.09:1,0,0	0/1:7,0:3:0:0,0,0	0/1:7,2:9:0.06:0,0,0	0/1:9,5:13:0.01:0,0,0	./.	0/0:13,3:16:1.63:0,2,9	0/1:8,3:11:5.46:194,0,5	1/1:7,1:8:2.32:47,2,0	./.
chr10	21000542	.	GTGTGAGTGTC	G	1280.83	PASS	AB=1.000;AC=30;AF=0.625;AN=48;BaseQRankSum=3.654;DP=350;FS=34.959;HRun=0;HaplotypeScore=135.3445;InbreedingCoeff=0.3745;MQ=24.03;MQ0=137;MQRankSum=-4.466;QD=6.96;ReadPosRankSum=0.701;VQSLOD=0.8276;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:1,0:1:0:0,0,0	1/1:4,0:4:2.74:12,3,0	0/1:58,0:1:0:0,0,0	./.	0/1:8,0:8:0:0,0,0	1/1:9,1:10:3.43:19,3,0	1/1:3,0:2:6.02:159,6,0	./.	0/0:5,0:4:0.94:0,1,3	0/1:13,0:13:1.51:212,0,2	0/0:9,0:9:0.28:0,0,1	1/1:8,0:8:8.03:62,8,0	1/1:14,0:14:14.31:226,14,0	0/1:2,0:2:0:0,0,0	0/0:42,0:32:51.03:0,51,1355	1/1:11,1:12:9.03:163,9,0	1/1:1,0:1:2.74:12,3,0	0/1:2,0:2:0:0,0,0	1/1:3,0:2:3.01:52,3,0	1/1:9,1:10:0.47:1,0,0	0/1:7,0:3:0:0,0,0	1/1:11,0:11:0.94:2,1,0	0/0:13,1:13:0.15:0,0,1	./.	0/0:16,0:16:1.35:0,1,3	1/1:10,0:10:1.72:333,2,0	1/1:7,1:8:9.39:127,9,0	./.
chr10	21000546	.	GAGTGTC	G	639.36	PASS	AB=0.975;AC=31;AF=0.674;AN=46;BaseQRankSum=3.344;DP=349;FS=28.145;HRun=0;HaplotypeScore=139.1171;InbreedingCoeff=0.3121;MQ=23.49;MQ0=150;MQRankSum=-4.865;QD=4.70;ReadPosRankSum=-0.933;VQSLOD=0.7494;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:2,0:2:0:0,0,0	1/1:4,0:4:2.96:19,3,0	./.	./.	0/1:7,0:7:0:0,0,0	1/1:9,0:9:1.72:3,2,0	1/1:2,1:2:6.02:107,6,0	./.	0/0:3,1:3:0.36:0,0,1	0/1:13,0:13:18.33:66,0,18	0/0:6,0:6:0.25:0,0,1	1/1:8,0:8:8.16:46,8,0	1/1:13,0:13:11.19:110,11,0	0/1:1,0:1:0:0,0,0	0/0:44,0:34:50.97:0,51,1331	1/1:10,1:11:8.63:74,9,0	1/1:1,0:1:3.01:35,3,0	1/1:2,0:2:2.92:17,3,0	1/1:4,0:2:3.01:32,3,0	1/1:6,1:7:0.47:1,0,0	0/1:6,1:3:0:0,0,0	1/1:12,0:12:1.08:2,1,0	0/0:13,0:12:0.13:0,0,1	./.	1/1:17,0:17:2.75:9,3,0	0/1:9,0:9:0.01:142,0,0	1/1:7,1:8:9.39:77,9,0	./.
chr10	21000548	.	GTGTC	G	392.53	PASS	AB=0.944;AC=22;AF=0.524;AN=42;BaseQRankSum=1.103;DP=359;FS=15.814;HRun=0;HaplotypeScore=144.2878;InbreedingCoeff=0.0979;MQ=23.45;MQ0=157;MQRankSum=-3.268;QD=3.24;ReadPosRankSum=-2.416;VQSLOD=0.7728;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:1,1:2:0:0,0,0	1/1:5,0:5:3.41:19,3,0	./.	./.	./.	1/1:9,0:9:3.43:19,3,0	1/1:3,0:2:1.83:9,2,0	./.	0/0:4,0:3:0.47:0,0,1	0/1:14,0:14:13.73:14,0,182	0/0:6,0:6:0.34:0,0,1	1/1:8,0:8:8.55:63,9,0	0/1:12,1:13:31.76:125,0,32	./.	0/0:44,0:34:47.75:0,48,898	0/1:10,1:11:20.66:56,0,21	0/0:2,0:2:1.21:0,1,11	1/1:1,1:2:1.25:3,1,0	1/1:4,0:2:3.01:36,3,0	1/1:6,1:7:0.47:1,0,0	0/0:7,0:3:0:0,0,0	1/1:10,2:12:1.31:3,1,0	0/1:14,0:13:0.18:0,0,0	./.	0/0:17,0:17:0.76:0,1,2	0/1:7,2:9:23.94:97,0,24	0/1:10,0:10:0.15:50,0,0	./.
chr10	21000555	.	T	TGTGA	1078.66	PASS	AB=0.905;AC=16;AF=0.348;AN=46;BaseQRankSum=0.960;DP=370;FS=6.644;HRun=0;HaplotypeScore=141.4096;InbreedingCoeff=0.2439;MQ=23.41;MQ0=167;MQRankSum=-2.039;QD=10.47;ReadPosRankSum=3.209;VQSLOD=2.4822;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:2,0:2:0:0,0,0	0/0:5,0:5:0.84:0,1,2	./.	./.	0/0:7,0:7:0.47:0,0,2	0/1:9,0:9:0.04:0,0,0	1/1:4,0:2:6.02:147,6,0	./.	0/1:4,1:4:0.05:0,0,0	0/1:14,3:17:99:410,0,130	0/0:5,2:7:0.32:0,0,1	0/1:6,0:6:0.93:1,0,5	0/1:11,0:11:26.87:117,0,27	0/0:1,0:1:0:0,0,0	0/0:50,0:39:42.07:0,42,622	1/1:12,0:12:8.80:119,9,0	1/1:2,0:2:3.01:32,3,0	0/0:2,0:2:2.90:0,3,16	0/0:3,0:2:2.92:0,3,8	0/1:6,1:7:0.04:0,0,0	0/0:6,0:3:0:0,0,0	0/1:7,6:13:0.36:1,0,0	0/0:11,1:11:0.02:0,0,0	./.	0/0:11,3:14:2.60:0,3,14	1/1:9,1:10:11.22:308,11,0	0/1:7,0:7:5.11:49,0,5	./.
chr10	21000557	.	T	TGA	322.85	PASS	AB=0.867;AC=23;AF=0.500;AN=46;BaseQRankSum=2.194;DP=370;FS=9.902;HRun=0;HaplotypeScore=141.6571;InbreedingCoeff=0.1793;MQ=23.00;MQ0=169;MQRankSum=-1.855;QD=2.65;ReadPosRankSum=0.497;VQSLOD=2.2333;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:2,0:2:0:0,0,0	0/0:4,2:6:4.55:0,5,21	./.	./.	1/1:5,2:7:0.29:1,0,0	1/1:4,4:8:0.43:1,0,0	1/1:2,2:2:6.02:68,6,0	./.	0/1:5,0:4:0.08:0,0,0	0/1:14,2:16:99:119,0,148	1/1:7,1:8:1.32:4,1,0	0/0:2,4:6:3.29:0,3,16	0/1:8,3:11:17.34:59,0,17	0/0:0,1:1:0:0,0,0	0/0:48,0:37:45.03:0,45,570	1/1:7,4:11:5.27:42,5,0	1/1:2,0:2:2.04:6,2,0	0/0:2,0:2:3:0,3,29	0/0:3,0:2:4.07:0,4,12	1/1:6,1:7:0.33:1,0,0	0/0:6,0:3:0:0,0,0	1/1:11,2:13:0.73:3,1,0	1/1:7,5:11:0.07:0,0,0	./.	0/0:11,3:14:1.48:0,1,10	0/1:8,3:11:8.29:113,0,8	0/1:6,1:7:7.57:13,0,8	./.
chr10	21000559	.	T	TGA	396.50	PASS	AB=0.802;AC=28;AF=0.583;AN=48;BaseQRankSum=2.923;DP=366;FS=9.092;HRun=0;HaplotypeScore=130.9788;InbreedingCoeff=0.2923;MQ=23.23;MQ0=165;MQRankSum=-3.616;QD=3.07;ReadPosRankSum=1.196;VQSLOD=2.1985;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:3,0:3:0:0,0,0	0/0:4,2:6:3.54:0,4,20	./.	./.	1/1:5,2:7:0.29:1,0,0	1/1:4,4:8:0.42:1,0,0	1/1:3,2:3:6.02:72,6,0	./.	0/1:5,0:4:0.08:0,0,0	0/1:15,2:17:78.83:84,0,79	1/1:7,1:8:1.32:4,1,0	0/1:1,4:6:0.13:1,0,0	1/1:9,3:12:8.33:96,8,0	0/0:0,1:1:0:0,0,0	0/0:48,0:37:42.07:0,42,552	1/1:7,4:11:5.50:46,5,0	1/1:2,0:2:2.99:23,3,0	0/0:2,0:2:2.92:0,3,17	1/1:2,0:1:2.97:20,3,0	1/1:5,1:6:0.36:1,0,0	0/0:6,0:3:0:0,0,0	1/1:11,2:13:0.73:3,1,0	1/1:5,5:9:0.12:1,0,0	0/0:1,0:1:0:0,0,0	0/0:11,3:14:1.11:0,1,7	0/1:7,3:10:5.44:115,0,5	1/1:6,1:7:4.73:36,5,0	./.
chr10	21000562	.	GTC	G	347.95	PASS	AB=0.885;AC=23;AF=0.548;AN=42;BaseQRankSum=3.816;DP=366;FS=0.000;HRun=0;HaplotypeScore=135.0541;InbreedingCoeff=0.1355;MQ=23.03;MQ0=161;MQRankSum=-2.484;QD=2.70;ReadPosRankSum=-1.566;VQSLOD=2.2981;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:3,0:3:0.01:0,0,0	0/1:4,3:7:4.94:25,0,5	./.	./.	0/1:6,1:7:0:0,0,0	1/1:7,1:8:0.89:2,1,0	0/0:5,0:3:3.48:0,3,32	./.	0/0:3,2:4:0.47:0,0,1	0/1:14,3:17:99:109,0,121	0/1:5,2:7:0.06:1,0,0	0/0:6,0:6:2.05:0,2,10	0/1:9,2:11:22.23:40,0,22	./.	0/0:48,0:37:44.34:0,44,530	0/0:10,1:11:4.25:0,4,37	1/1:1,1:2:5.90:38,6,0	1/1:1,1:2:3.01:43,3,0	0/1:3,0:2:5.21:5,0,15	1/1:5,1:6:0.89:2,1,0	./.	1/1:12,2:14:2.06:5,2,0	0/1:10,0:9:0.03:0,0,0	./.	1/1:10,4:14:3.87:26,4,0	0/1:10,1:11:43.59:96,0,44	1/1:5,2:7:9.37:68,9,0	./.
chr10	21000574	.	GTC	G	90.75	PASS	AB=0.947;AC=22;AF=0.500;AN=44;BaseQRankSum=3.344;DP=385;FS=0.000;HRun=0;HaplotypeScore=154.1684;InbreedingCoeff=0.1085;MQ=23.37;MQ0=152;MQRankSum=-2.137;QD=0.61;ReadPosRankSum=-2.480;VQSLOD=2.0279;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:3,0:3:0.01:0,0,0	1/1:8,0:8:3.56:13,4,0	./.	./.	0/1:10,0:9:0:0,0,0	1/1:7,0:7:1.77:4,2,0	0/0:7,0:5:5.88:0,6,36	./.	0/0:7,0:6:0.47:0,0,1	0/1:19,0:19:30.52:31,0,97	0/1:8,0:8:0.06:1,0,0	1/1:8,0:8:2.60:8,3,0	0/1:15,0:15:12.26:12,0,33	0/1:3,0:3:0:0,0,0	0/0:46,0:34:41.81:0,42,767	0/0:13,0:13:2.07:0,2,18	0/0:2,0:2:5.27:0,5,24	1/1:1,0:1:0.89:2,1,0	0/0:4,0:3:1.18:0,1,17	1/1:6,0:6:0.84:2,1,0	./.	1/1:10,5:15:2.02:5,2,0	0/1:10,2:12:0.03:0,0,0	./.	0/1:14,2:16:3.49:13,0,3	0/1:7,2:9:26.77:64,0,27	0/1:9,1:10:12.73:40,0,13	./.
chr10	21000583	.	TGTGA	T	92.40	PASS	AB=0.950;AC=22;AF=0.478;AN=46;BaseQRankSum=1.846;DP=375;FS=0.000;HRun=0;HaplotypeScore=152.7197;InbreedingCoeff=0.1723;MQ=24.58;MQ0=142;MQRankSum=-2.243;QD=0.76;ReadPosRankSum=-1.834;VQSLOD=2.4883;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:3,0:3:0:0,0,0	1/1:9,0:9:6.35:36,6,0	./.	./.	1/1:8,0:7:1.15:3,1,0	1/1:7,0:7:1.36:3,1,0	./.	./.	0/0:6,0:6:0.37:0,0,1	0/1:18,0:18:3.98:4,0,189	0/0:7,0:7:1.19:0,1,3	0/1:7,0:7:0.06:0,0,0	0/0:12,0:12:10.50:0,11,74	1/1:3,0:3:0.47:1,0,0	0/0:57,0:45:50.50:0,50,1098	0/0:10,0:10:0.53:0,1,47	0/1:5,0:5:11.10:11,0,39	0/0:1,0:1:3.01:0,3,36	1/1:2,0:2:2.33:16,2,0	1/1:5,0:5:1.38:3,1,0	0/1:8,0:3:0:0,0,0	1/1:10,5:15:0.88:2,1,0	0/0:11,2:13:0.03:0,0,0	0/1:1,0:1:0:0,0,0	0/1:13,2:15:0.55:1,0,1	0/1:7,2:9:46.10:76,0,46	0/1:8,1:9:32.19:37,0,32	./.
chr10	21000588	.	G	GTGTGTGTC	490.68	PASS	AB=0.966;AC=27;AF=0.563;AN=48;BaseQRankSum=2.326;DP=352;FS=0.000;HRun=0;HaplotypeScore=149.8542;InbreedingCoeff=0.0928;MQ=24.64;MQ0=135;MQRankSum=-1.180;QD=3.09;ReadPosRankSum=-0.007;VQSLOD=2.2879;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:3,0:3:0.10:0,0,0	1/1:9,0:9:5.47:66,5,0	./.	./.	0/1:6,2:7:0.13:0,0,0	0/1:5,0:5:0.03:0,0,0	0/1:6,0:5:0.10:0,0,0	./.	0/1:5,0:5:0.02:0,0,0	0/1:16,1:17:99:209,0,206	0/1:4,2:6:0.12:0,0,2	0/1:6,0:5:0.05:0,0,0	0/1:11,0:11:38.44:45,0,38	0/1:3,0:3:0:0,0,0	0/0:54,0:42:48.13:0,48,1155	0/0:9,0:9:4.86:0,5,38	0/1:5,0:5:22.78:23,0,23	0/0:1,0:1:0:0,0,0	1/1:4,0:2:4.20:22,4,0	1/1:5,0:5:0.47:1,0,0	0/1:9,0:4:0:0,0,0	1/1:12,0:12:0.83:3,1,0	1/1:12,0:12:0.70:1,1,0	0/1:2,0:2:0:0,0,0	1/1:13,0:13:2.47:51,2,0	0/1:10,0:10:88.20:115,0,88	0/1:8,0:8:25.69:54,0,26	./.
chr10	21000589	.	T	TGA	87.80	PASS	AB=0.895;AC=19;AF=0.413;AN=46;BaseQRankSum=3.963;DP=348;FS=2.885;HRun=0;HaplotypeScore=141.3657;InbreedingCoeff=0.2138;MQ=24.78;MQ0=131;MQRankSum=-2.087;QD=1.00;ReadPosRankSum=-0.771;VQSLOD=2.6317;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:1,2:3:0:0,0,0	1/1:9,0:9:2.78:10,3,0	./.	./.	0/0:8,0:7:1.07:0,1,3	1/1:5,0:5:0.41:1,0,0	./.	./.	0/1:4,1:5:0:0,0,0	0/0:17,0:17:12.46:0,12,330	1/1:6,0:6:1.31:4,1,0	0/1:6,0:5:0.06:0,0,0	0/1:11,0:11:9.99:31,0,10	0/0:3,0:3:0.47:0,0,1	0/0:54,0:42:50.98:0,51,738	0/0:9,0:9:5.69:0,6,35	0/1:4,1:5:12.24:53,0,12	1/1:1,0:1:2.96:19,3,0	1/1:4,0:2:0.58:16,1,0	0/0:5,0:5:0.33:0,0,1	0/0:7,2:4:0:0,0,0	1/1:11,1:12:0.72:3,1,0	0/1:11,0:11:0.17:0,0,0	0/0:1,1:2:0:0,0,0	0/0:13,0:13:2.74:0,3,15	0/1:10,0:10:51.76:52,0,52	0/0:9,0:9:4.11:0,4,33	./.
chr10	21000596	.	GTC	G	649.02	PASS	AB=0.697;AC=24;AF=0.545;AN=44;BaseQRankSum=4.411;DP=325;FS=8.813;HRun=0;HaplotypeScore=130.9373;InbreedingCoeff=0.1820;MQ=25.51;MQ0=117;MQRankSum=-2.634;QD=4.92;ReadPosRankSum=-1.110;VQSLOD=1.9815;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:3,0:3:0:0,0,0	1/1:2,4:6:4.37:49,4,0	./.	./.	0/1:4,3:6:0:0,0,0	1/1:1,2:3:1.77:4,2,0	./.	./.	0/0:1,4:5:0.47:0,0,1	0/1:12,4:16:99:162,0,313	0/1:3,3:6:0.05:1,0,0	0/1:2,3:4:0:0,0,0	0/1:3,8:11:16.99:109,0,17	0/1:1,2:3:0:0,0,0	0/0:55,0:43:53.48:0,53,926	0/1:1,7:8:11.96:35,0,12	1/1:4,1:5:7.97:46,8,0	0/0:1,0:1:1.55:0,2,4	0/0:4,0:1:0.89:0,1,2	1/1:3,2:5:0.84:2,1,0	0/0:5,3:4:0.89:0,1,2	1/1:9,4:13:1.91:5,2,0	0/1:6,3:9:0:0,0,0	./.	1/1:7,6:13:6.74:36,7,0	0/1:6,4:9:12.46:148,0,12	1/1:4,5:9:10.44:157,10,0	./.
chr10	21000606	.	GTA	G	609.43	PASS	AB=0.966;AC=28;AF=0.560;AN=50;BaseQRankSum=5.549;DP=323;FS=8.761;HRun=0;HaplotypeScore=123.4974;InbreedingCoeff=0.2507;MQ=26.67;MQ0=92;MQRankSum=-4.561;QD=3.21;ReadPosRankSum=-0.377;VQSLOD=2.0865;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:2,1:3:0:0,0,0	1/1:4,2:6:2.54:45,3,0	./.	0/1:47,1:3:30.22:30,0,46	0/1:9,0:8:0:0,0,0	1/1:2,0:2:0.86:2,1,0	1/1:7,0:6:1.25:4,1,0	0/0:7,0:1:2.99:0,3,23	0/1:5,0:5:0:0,0,0	1/1:8,7:15:4.53:261,5,0	0/1:8,0:8:0.15:0,0,1	0/0:6,0:5:5.56:0,6,30	1/1:10,1:11:14.46:78,14,0	0/1:2,0:2:0:0,0,0	0/0:56,0:47:69.45:0,69,1287	1/1:9,0:9:3:41,3,0	1/1:5,0:5:7.46:42,7,0	./.	0/0:5,0:2:0.88:0,1,2	0/1:4,0:4:0.03:0,0,0	0/0:8,0:4:0:0,0,0	0/1:14,0:13:0.15:0,0,0	0/1:7,0:7:0:0,0,0	0/1:3,0:3:0:0,0,0	1/1:11,0:11:5.87:38,6,0	0/1:10,0:9:36.53:102,0,37	0/1:8,1:9:19.64:78,0,20	./.
chr10	21000621	.	T	TGA	73.80	PASS	AB=0.970;AC=12;AF=0.231;AN=52;BaseQRankSum=1.900;DP=389;FS=5.140;HRun=0;HaplotypeScore=137.9643;InbreedingCoeff=0.2921;MQ=32.80;MQ0=61;MQRankSum=-3.071;QD=0.72;ReadPosRankSum=-0.671;VQSLOD=2.3731;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:3,0:3:0:0,0,0	0/0:9,2:11:5.48:0,5,34	0/0:45,0:2:2.22:0,2,8	0/0:58,0:9:17.67:0,18,240	0/0:14,0:14:1.44:0,1,5	0/1:3,0:3:0.03:0,0,0	0/0:10,0:9:0:0,0,0	0/0:10,0:5:11.95:0,12,114	0/1:9,0:8:0.20:0,0,0	0/1:18,5:22:99:119,0,354	1/1:10,0:10:0.62:3,1,0	0/0:7,0:6:8.86:0,9,85	0/1:12,0:12:35.36:35,0,65	0/0:4,0:4:0.47:0,0,1	0/0:51,0:45:81.14:0,81,1215	0/0:13,0:11:2.98:0,3,22	0/0:5,0:5:4.86:0,5,51	./.	0/0:9,0:3:9.03:0,9,134	0/0:11,0:11:0.42:0,0,2	0/1:8,0:4:0:0,0,0	1/1:22,0:20:0.83:2,1,0	1/1:12,0:12:0.69:1,1,0	0/0:3,0:3:0:0,0,0	0/0:12,0:12:6.50:0,6,34	0/0:12,0:11:28.60:0,29,291	0/0:10,0:9:12.81:0,13,154	./.
chr10	21000625	.	TGA	T	157.85	PASS	AB=0.899;AC=16;AF=0.308;AN=52;BaseQRankSum=1.563;DP=398;FS=0.000;HRun=0;HaplotypeScore=136.3465;InbreedingCoeff=0.0876;MQ=37.22;MQ0=57;MQRankSum=-2.516;QD=1.15;ReadPosRankSum=-1.968;VQSLOD=2.0412;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:3,0:3:0.08:0,0,0	0/1:9,2:11:14.52:33,0,15	0/0:47,0:2:2.89:0,3,16	0/0:64,0:15:15.72:0,16,329	0/1:12,2:14:0:0,0,0	0/1:3,0:3:0.01:0,0,0	1/1:10,1:10:1.25:4,1,0	0/0:9,0:6:17.94:0,18,185	0/0:10,0:9:0.26:0,0,1	0/1:22,2:23:47.25:47,0,322	0/0:10,0:10:1.52:0,2,4	0/0:8,0:6:9:0,9,95	0/1:12,0:12:8.29:56,0,8	0/1:5,0:5:0:0,0,0	0/0:50,0:44:67.92:0,68,1419	0/0:13,0:11:5.47:0,5,32	0/1:2,3:5:12.98:39,0,13	./.	0/0:7,0:3:9.03:0,9,171	0/1:11,1:12:1.45:13,0,1	0/0:8,0:4:0:0,0,0	0/0:17,3:18:1.89:0,2,5	0/0:10,2:12:3.51:0,4,19	0/1:2,1:3:0:0,0,0	1/1:9,1:10:0.79:4,1,0	0/1:13,1:13:8.65:9,0,253	0/1:9,1:9:46.05:64,0,46	./.
chr10	21000651	.	AGTGC	A	819.47	PASS	AB=0.696;AC=27;AF=0.540;AN=50;BaseQRankSum=6.412;DP=351;FS=3.431;HRun=0;HaplotypeScore=110.0101;InbreedingCoeff=0.1411;MQ=53.22;MQ0=11;MQRankSum=-4.846;QD=5.22;ReadPosRankSum=-1.859;VQSLOD=1.6230;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:1,0:1:0:0,0,0	0/0:6,3:8:5.66:0,6,37	0/0:51,0:12:1.66:0,2,278	0/0:79,0:24:31.66:0,32,571	1/1:7,5:11:2.03:6,2,0	1/1:0,1:1:0.89:2,1,0	0/1:5,1:6:0:0,0,0	0/1:5,4:7:46.80:155,0,47	0/1:1,5:5:0:0,0,0	0/1:9,5:13:39.38:217,0,39	0/1:2,5:6:0:0,0,0	1/1:1,7:7:6.02:113,6,0	0/1:5,4:9:29.07:53,0,29	1/1:1,4:5:0.47:1,0,0	0/0:47,0:46:98.92:0,99,2377	0/1:2,8:8:0:0,0,0	1/1:4,0:4:0.89:2,1,0	./.	./.	1/1:5,8:11:5.51:61,6,0	0/0:3,2:2:0:0,0,0	0/1:7,8:13:0.01:0,0,0	0/1:5,5:10:0.04:0,0,0	0/1:2,1:3:0.02:0,0,0	1/1:3,6:8:0.94:3,1,0	0/1:3,5:8:21.45:212,0,21	0/1:4,3:6:14.13:102,0,14	./.
chr10	21000717	.	TGA	T	101.05	PASS	AB=0.912;AC=14;AF=0.280;AN=50;BaseQRankSum=2.834;DP=322;FS=7.466;HRun=0;HaplotypeScore=60.5892;InbreedingCoeff=0.0557;MQ=22.12;MQ0=134;MQRankSum=-1.332;QD=1.37;ReadPosRankSum=-1.400;VQSLOD=-0.0846;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:6,0:4:0:0,0,0	0/0:4,0:4:4.99:0,5,43	0/0:61,0:1:3.01:0,3,47	0/0:86,0:2:2.68:0,3,11	./.	1/1:1,1:2:3.01:45,3,0	0/1:7,1:4:0:0,0,0	0/0:7,0:6:17.96:0,18,173	0/1:3,1:3:0:0,0,0	0/1:3,0:3:14.24:16,0,14	./.	0/0:5,1:5:3.85:0,4,32	0/0:4,0:4:8.02:0,8,59	0/0:3,0:3:0.40:0,0,12	0/0:48,0:37:41.75:0,42,751	0/1:8,0:8:4.61:5,0,15	0/1:7,0:6:10.04:10,0,31	0/1:5,1:6:31.11:32,0,31	0/1:5,0:4:5.80:6,0,113	0/0:8,1:7:3.09:0,3,46	0/0:3,0:2:3.01:0,3,33	0/1:8,0:7:0:0,0,0	0/0:3,0:3:0:0,0,0	1/1:13,0:8:2.88:16,3,0	0/0:2,0:2:0.86:0,1,2	0/1:1,3:4:28.19:82,0,28	0/0:5,0:4:5.86:0,6,44	./.
chr10	21000719	.	A	AGT	822.25	PASS	AB=0.790;AC=23;AF=0.548;AN=42;BaseQRankSum=1.447;DP=318;FS=20.268;HRun=0;HaplotypeScore=60.7791;InbreedingCoeff=0.3152;MQ=21.82;MQ0=139;MQRankSum=-3.535;QD=10.54;ReadPosRankSum=-0.128;VQSLOD=1.5778;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:6,0:4:0:0,0,0	1/1:0,2:2:6.02:94,6,0	./.	./.	./.	0/0:1,1:2:2.22:0,2,7	0/0:6,2:4:0.47:0,0,1	1/1:8,0:6:12.04:158,12,0	0/1:1,3:3:0:0,0,0	1/1:3,0:3:6.02:81,6,0	./.	1/1:3,3:5:5.61:58,6,0	0/1:1,2:3:0.09:86,0,0	1/1:0,3:3:5.72:92,6,0	0/0:50,0:38:36.02:0,36,493	1/1:4,4:8:10.28:141,10,0	0/1:5,2:6:7.21:7,0,13	0/0:5,1:6:0.93:0,1,9	0/1:4,0:4:0.45:19,0,0	0/1:6,2:6:17.52:56,0,18	./.	0/1:4,2:6:0:0,0,0	./.	0/0:12,1:8:1.55:0,2,4	1/1:1,2:2:3.01:47,3,0	0/0:5,0:5:8.10:0,8,39	1/1:2,3:4:6.02:100,6,0	./.
chr10	21000720	.	GTGTGAGTGTC	G	1458.33	PASS	AB=1.000;AC=33;AF=0.786;AN=42;BaseQRankSum=2.094;DP=317;FS=29.786;HRun=0;HaplotypeScore=66.6418;InbreedingCoeff=0.2388;MQ=21.89;MQ0=140;MQRankSum=-4.292;QD=13.38;ReadPosRankSum=-0.087;VQSLOD=0.3249;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:6,0:4:0:0,0,0	1/1:2,0:2:6.02:101,6,0	./.	./.	./.	1/1:2,0:2:1.25:3,1,0	0/1:8,0:4:0:0,0,0	1/1:7,1:6:17.98:299,18,0	./.	1/1:3,0:3:6.02:143,6,0	./.	1/1:6,0:5:3.47:28,3,0	1/1:3,0:3:2.11:82,2,0	1/1:4,0:4:6.02:128,6,0	0/0:50,0:38:40.58:0,41,1166	1/1:7,1:8:9.92:226,10,0	1/1:7,0:6:8.73:55,9,0	0/1:6,0:6:14.66:23,0,15	1/1:5,0:4:6.22:66,6,0	1/1:8,0:6:2.01:132,2,0	./.	0/1:7,0:6:0:0,0,0	0/0:3,0:3:0:0,0,0	1/1:13,0:8:3.22:13,3,0	1/1:3,0:2:3.01:89,3,0	0/1:5,0:5:5.46:23,0,5	1/1:3,2:4:6.02:150,6,0	./.
chr10	21000723	.	TGA	T	174.95	PASS	AB=0.931;AC=25;AF=0.568;AN=44;BaseQRankSum=1.405;DP=321;FS=12.828;HRun=0;HaplotypeScore=65.9421;InbreedingCoeff=0.1219;MQ=21.84;MQ0=149;MQRankSum=-1.648;QD=1.64;ReadPosRankSum=-1.475;VQSLOD=0.2359;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:4,2:4:0:0,0,0	0/0:2,0:2:3.63:0,4,10	./.	./.	./.	1/1:2,0:2:2.84:14,3,0	0/1:5,3:4:0:0,0,0	0/1:10,0:8:26.70:47,0,27	0/1:4,0:3:0:0,0,0	1/1:3,0:3:5.95:42,6,0	./.	0/0:5,1:5:1.10:0,1,6	0/1:3,0:3:3.86:13,0,4	0/1:4,0:4:0.85:9,0,1	0/0:54,0:42:38.72:0,39,659	1/1:8,0:8:4.13:17,4,0	0/1:7,0:6:3.19:14,0,3	0/1:6,0:6:12.53:13,0,35	1/1:5,0:4:3.16:37,3,0	0/1:7,1:6:9.28:31,0,9	./.	0/1:6,1:6:0:0,0,0	0/0:2,1:3:0:0,0,0	1/1:13,0:8:2.86:15,3,0	1/1:3,0:2:2.37:8,2,0	1/1:5,0:5:7.14:25,7,0	0/1:5,0:4:0.22:0,0,2	./.
chr10	21000733	.	T	TGTGA	1592.69	PASS	AB=0.974;AC=26;AF=0.565;AN=46;BaseQRankSum=4.137;DP=350;FS=14.046;HRun=0;HaplotypeScore=86.2190;InbreedingCoeff=0.1816;MQ=22.74;MQ0=148;MQRankSum=-2.859;QD=15.03;ReadPosRankSum=2.536;VQSLOD=2.2726;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:6,4:6:0:0,0,0	1/1:2,0:2:6.02:148,6,0	./.	./.	./.	0/0:3,0:3:2.80:0,3,13	0/0:9,1:6:0.88:0,1,2	0/1:11,0:8:27.14:27,0,113	1/1:7,0:5:2.58:10,3,0	0/1:3,0:3:19.35:42,0,19	./.	0/1:9,0:8:17.66:60,0,18	1/1:3,1:4:9.03:198,9,0	1/1:5,0:5:5.97:148,6,0	0/0:56,0:44:42.24:0,42,600	1/1:8,1:9:8.91:217,9,0	1/1:5,3:7:12.01:189,12,0	0/1:9,2:10:33.13:170,0,33	0/1:4,0:1:0:0,0,0	1/1:9,0:8:3.46:55,3,0	0/0:9,1:5:0:0,0,0	0/1:8,0:7:0.03:0,0,0	0/0:4,0:4:0:0,0,0	0/0:5,8:8:1.36:0,1,3	1/1:3,0:2:3:77,3,0	1/1:7,1:8:3.09:230,3,0	1/1:5,0:4:6.01:140,6,0	./.
chr10	21000735	.	T	TGA	370.54	PASS	AB=0.837;AC=22;AF=0.478;AN=46;BaseQRankSum=3.540;DP=358;FS=6.264;HRun=0;HaplotypeScore=94.2737;InbreedingCoeff=0.0813;MQ=22.89;MQ0=150;MQRankSum=-2.488;QD=3.46;ReadPosRankSum=5.630;VQSLOD=0.8687;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:10,1:7:0.12:0,0,0	1/1:0,2:2:6.02:71,6,0	./.	./.	./.	1/1:3,1:4:0.86:2,1,0	0/0:7,2:6:1.20:0,1,3	0/0:11,0:8:12.43:0,12,119	0/0:4,3:5:2.64:0,3,18	0/1:3,0:3:4.45:4,0,21	./.	0/1:7,3:9:12.48:24,0,12	0/1:3,2:5:8.92:67,0,9	0/1:2,3:5:10.34:53,0,10	0/0:57,0:45:44.28:0,44,532	1/1:5,4:9:8.86:91,9,0	0/1:6,2:7:7.53:40,0,8	0/1:9,1:9:18.03:18,0,64	0/0:3,0:1:2.37:0,2,8	1/1:7,2:8:2.66:8,3,0	0/0:11,0:6:0:0,0,0	0/1:6,2:7:0.03:0,0,0	0/1:4,1:5:0.01:0,0,0	0/0:12,1:8:2.98:0,3,22	1/1:3,2:4:2.98:33,3,0	0/1:8,0:8:24.96:25,0,47	1/1:2,2:4:5.97:59,6,0	./.
chr10	21000737	.	T	TGA	500.46	PASS	AB=0.843;AC=24;AF=0.500;AN=48;BaseQRankSum=2.007;DP=365;FS=19.709;HRun=0;HaplotypeScore=99.7876;InbreedingCoeff=0.2904;MQ=23.22;MQ0=150;MQRankSum=-3.754;QD=4.86;ReadPosRankSum=3.064;VQSLOD=1.2479;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:11,1:8:0.12:0,0,0	1/1:1,2:3:6.02:73,6,0	./.	./.	./.	1/1:3,1:4:2.34:8,2,0	0/0:7,2:6:0.43:0,0,1	1/1:10,0:7:13.85:71,14,0	0/0:4,3:5:2.64:0,3,18	0/1:3,0:3:11.04:14,0,11	0/0:3,0:3:0:0,0,0	0/1:7,3:9:11.99:29,0,12	0/1:3,2:5:26.57:61,0,27	1/1:2,3:5:8.53:79,9,0	0/0:59,0:47:47.26:0,47,543	1/1:5,4:9:8.88:98,9,0	0/0:7,2:8:2.37:0,2,25	0/0:9,1:9:10.03:0,10,95	0/0:3,0:1:2.94:0,3,18	1/1:7,2:8:3.24:13,3,0	0/0:11,0:6:0:0,0,0	0/1:7,2:8:0.03:0,0,0	0/1:4,1:5:0.01:0,0,0	0/0:12,1:8:2.98:0,3,22	1/1:3,2:4:2.98:34,3,0	1/1:8,0:8:0.91:77,1,0	1/1:3,3:5:6:70,6,0	./.
chr10	21000740	.	GTC	G	273.63	PASS	AB=0.937;AC=20;AF=0.417;AN=48;BaseQRankSum=2.029;DP=378;FS=0.000;HRun=0;HaplotypeScore=103.1950;InbreedingCoeff=-0.0138;MQ=22.97;MQ0=154;MQRankSum=-3.405;QD=2.14;ReadPosRankSum=1.139;VQSLOD=1.8810;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:9:2.70:14,3,0	0/1:4,0:4:5.01:5,0,57	./.	./.	./.	1/1:3,1:4:3.01:43,3,0	0/1:8,1:6:0:0,0,0	0/1:4,4:5:27.64:118,0,28	0/0:6,1:5:2.64:0,3,18	0/1:2,0:2:16.36:16,0,31	0/0:3,0:3:0:0,0,0	0/0:10,1:9:5.91:0,6,69	0/1:7,0:7:24.07:24,0,52	0/0:5,0:5:4.99:0,5,51	0/0:58,0:46:27.44:0,27,475	0/0:9,0:9:0.40:0,0,13	0/1:10,0:9:20.28:46,0,20	0/1:10,0:10:18.39:18,0,71	0/0:4,0:1:2.99:0,3,23	1/1:8,1:8:2.94:21,3,0	0/1:14,0:9:0.02:0,0,0	1/1:9,0:8:2.41:14,2,0	0/1:5,0:5:0:0,0,0	1/1:15,0:9:2.86:15,3,0	0/0:6,0:5:0.47:0,0,1	0/1:7,1:8:59.19:59,0,107	0/0:6,0:5:2.04:0,2,20	./.
chr10	21000752	.	GTC	G	214.64	PASS	AB=0.887;AC=23;AF=0.442;AN=52;BaseQRankSum=4.220;DP=400;FS=1.367;HRun=0;HaplotypeScore=128.8987;InbreedingCoeff=0.0944;MQ=23.89;MQ0=144;MQRankSum=-1.495;QD=1.49;ReadPosRankSum=0.740;VQSLOD=1.9076;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:2,9:7:2.70:14,3,0	0/0:6,0:6:8.95:0,9,72	./.	./.	0/1:4,0:4:0:0,0,0	1/1:5,1:6:2.37:8,2,0	0/0:7,1:5:0.47:0,0,1	0/0:7,0:4:2.61:0,3,20	1/1:7,0:5:2.37:8,2,0	1/1:4,0:3:2.80:7,3,0	1/1:4,0:4:0.45:1,0,0	0/1:10,0:9:0.18:0,0,3	0/1:9,1:9:13.95:53,0,14	0/1:11,0:9:14.19:14,0,16	0/0:59,0:47:48.15:0,48,831	1/1:9,0:9:4.55:24,5,0	0/1:6,3:8:1.34:62,0,1	0/1:9,3:11:11.88:74,0,12	0/0:4,0:1:2.99:0,3,24	0/0:12,0:11:2.22:0,2,7	0/1:4,10:9:0.02:0,0,0	0/0:15,0:14:5.59:0,6,41	0/1:6,0:5:0:0,0,0	0/0:5,10:9:2.74:0,3,12	0/1:11,0:10:3.39:3,0,11	0/1:6,2:8:52.50:52,0,71	0/1:7,0:6:10.71:14,0,11	0/0:2,0:2:2.80:0,3,13
chr10	21000754	.	CTGTG	C	204.53	PASS	AB=0.935;AC=18;AF=0.360;AN=50;BaseQRankSum=4.008;DP=413;FS=1.504;HRun=0;HaplotypeScore=137.7498;InbreedingCoeff=0.2144;MQ=24.05;MQ0=146;MQRankSum=-2.897;QD=1.68;ReadPosRankSum=-1.858;VQSLOD=2.5320;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:7:2.80:14,3,0	0/0:6,0:6:8.97:0,9,124	./.	./.	0/1:4,0:4:0:0,0,0	0/0:4,2:6:1.81:0,2,5	./.	0/0:6,0:4:12.04:0,12,202	0/0:7,0:5:2.90:0,3,16	0/0:5,0:4:2.96:0,3,19	1/1:4,0:4:0.47:2,0,0	0/0:11,0:10:2.33:0,2,52	0/1:10,2:11:7.75:8,0,56	0/1:8,4:10:28.70:44,0,29	0/0:58,0:46:48.12:0,48,1125	1/1:10,0:11:5.96:32,6,0	1/1:9,0:8:2.02:73,2,0	0/1:12,0:11:29.75:43,0,30	0/0:4,0:1:3.01:0,3,47	0/0:10,1:10:0:0,0,0	0/1:16,0:10:0:0,0,0	0/0:15,0:15:5.57:0,6,38	0/0:6,0:5:0:0,0,0	0/0:15,0:9:2.92:0,3,27	1/1:12,0:11:5.68:57,6,0	0/1:9,0:8:21.01:21,0,135	1/1:7,0:7:7.57:37,8,0	0/0:2,0:2:0:0,0,0
chr10	21000759	.	TGTGTGA	T	587.61	PASS	AB=0.973;AC=24;AF=0.462;AN=52;BaseQRankSum=3.633;DP=415;FS=2.675;HRun=0;HaplotypeScore=148.5143;InbreedingCoeff=0.1671;MQ=24.71;MQ0=133;MQRankSum=-1.727;QD=3.40;ReadPosRankSum=-1.828;VQSLOD=2.5866;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:12,0:7:2.60:10,3,0	0/0:6,0:6:8.77:0,9,106	./.	./.	0/1:7,0:7:0.01:0,0,1	0/0:9,0:9:0.45:0,0,1	1/1:9,0:7:2.04:6,2,0	0/0:7,0:5:15.05:0,15,197	0/0:7,0:5:2.29:0,2,8	0/0:6,0:5:1.48:0,1,17	1/1:5,0:5:1.23:3,1,0	0/1:12,0:10:7.79:8,0,31	0/1:15,0:13:43.49:53,0,43	0/1:13,0:10:25.76:67,0,26	0/0:59,0:47:51.08:0,51,1524	1/1:12,0:12:11.67:74,12,0	1/1:6,3:8:3.43:99,3,0	0/1:8,3:10:5.35:142,0,5	0/1:5,0:2:12.69:13,0,44	0/0:9,0:8:0.47:0,0,1	0/1:17,0:11:0.06:0,0,0	0/0:16,0:15:5.75:0,6,65	0/0:6,0:5:0:0,0,0	1/1:15,1:9:0.78:2,1,0	1/1:12,0:11:3.34:51,3,0	0/1:11,0:10:85.87:127,0,86	1/1:7,0:7:10.70:65,11,0	0/0:2,0:2:3.01:0,3,37
chr10	21000761	.	TGTGA	T	376.80	PASS	AB=0.916;AC=25;AF=0.481;AN=52;BaseQRankSum=4.514;DP=428;FS=4.449;HRun=0;HaplotypeScore=153.7812;InbreedingCoeff=0.2482;MQ=25.19;MQ0=135;MQRankSum=-3.261;QD=2.14;ReadPosRankSum=-2.372;VQSLOD=1.7818;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,9:7:2.80:14,3,0	0/0:5,0:6:8.76:0,9,102	./.	./.	0/1:7,0:7:0.12:0,0,0	1/1:9,1:10:2.79:13,3,0	1/1:7,1:6:2.04:6,2,0	0/0:7,0:5:15.01:0,15,181	0/0:7,0:5:2.21:0,2,7	0/1:7,0:6:5.19:5,0,7	1/1:6,0:6:0.86:2,1,0	0/1:15,0:13:7.85:8,0,25	0/1:14,1:13:3.53:4,0,39	0/1:14,0:11:8.06:36,0,8	0/0:62,0:50:59.82:0,60,1245	1/1:13,0:13:2.45:32,2,0	1/1:10,0:9:7.79:140,8,0	1/1:10,0:9:4.98:140,5,0	0/0:5,0:2:3:0,3,26	0/0:9,0:8:0.47:0,0,1	0/1:7,10:11:0:0,0,0	0/0:15,0:15:5.67:0,6,62	0/0:7,0:6:0:0,0,0	0/0:6,9:8:2.68:0,3,12	1/1:13,0:12:3.46:28,3,0	0/1:9,2:10:60.52:61,0,90	1/1:8,0:8:5.13:23,5,0	0/0:2,0:2:2.84:0,3,14
chr10	21000765	.	AGT	A	642.39	PASS	AB=0.951;AC=32;AF=0.667;AN=48;BaseQRankSum=4.949;DP=408;FS=12.578;HRun=0;HaplotypeScore=150.2154;InbreedingCoeff=0.0613;MQ=25.79;MQ0=123;MQRankSum=-3.714;QD=3.18;ReadPosRankSum=-0.149;VQSLOD=1.9587;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:12,0:7:2.70:14,3,0	0/1:5,1:6:11.25:11,0,68	./.	./.	0/1:5,2:7:0.05:0,0,0	./.	1/1:5,0:4:2.99:24,3,0	0/0:7,0:5:11.97:0,12,114	1/1:7,0:5:2.99:23,3,0	1/1:7,0:6:11.88:91,12,0	1/1:5,1:6:0.39:1,0,0	0/1:15,0:13:13.34:70,0,13	0/1:15,0:13:26.30:57,0,26	0/1:14,0:11:15.64:16,0,27	0/0:60,0:50:63.18:0,63,977	1/1:13,0:13:5.78:40,6,0	1/1:8,0:7:10.77:81,11,0	0/1:10,0:9:9.66:75,0,10	0/1:3,0:2:13.69:14,0,25	0/1:6,1:7:0.03:0,0,0	0/1:18,0:12:0.02:0,0,0	1/1:12,3:15:5.21:41,5,0	./.	0/0:15,0:8:1.53:0,2,4	1/1:12,1:12:2.94:18,3,0	0/1:11,0:10:53.85:54,0,105	1/1:8,0:8:11.90:88,12,0	1/1:0,2:2:5.98:57,6,0
chr10	21000767	.	T	TGA	267.40	PASS	AB=0.945;AC=18;AF=0.346;AN=52;BaseQRankSum=0.708;DP=419;FS=4.739;HRun=0;HaplotypeScore=161.0406;InbreedingCoeff=0.2118;MQ=26.09;MQ0=123;MQRankSum=-2.935;QD=2.09;ReadPosRankSum=-1.321;VQSLOD=1.6794;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:13,0:8:0.13:0,0,1	0/1:5,1:6:33.01:49,0,33	./.	./.	0/0:7,0:7:0:0,0,0	0/0:10,1:10:2.79:0,3,13	1/1:6,0:5:1.82:5,2,0	0/0:7,0:5:14.89:0,15,125	0/0:7,0:5:2.67:0,3,21	0/1:8,1:7:13.14:66,0,13	0/1:6,2:8:0.01:0,0,0	0/1:15,0:13:26.44:36,0,26	0/0:15,0:13:14.74:0,15,101	0/1:14,0:11:9.93:10,0,31	0/0:61,0:51:66.18:0,66,932	0/0:12,0:12:1.83:0,2,18	0/0:8,0:7:4.08:0,4,46	0/0:10,0:9:13.20:0,13,106	0/0:3,0:2:2.80:0,3,14	1/1:8,0:8:0.43:1,0,0	0/0:18,0:12:0:0,0,0	1/1:14,2:16:5.58:115,6,0	0/1:6,0:5:0:0,0,0	0/0:15,0:8:2.94:0,3,18	1/1:16,0:15:5.67:49,6,0	0/0:11,0:10:18.97:0,19,134	0/1:8,0:8:2.38:2,0,15	1/1:3,0:2:5.98:60,6,0
chr10	21000774	.	GTC	G	1012.85	PASS	AB=0.765;AC=33;AF=0.660;AN=50;BaseQRankSum=4.316;DP=422;FS=6.678;HRun=0;HaplotypeScore=160.0235;InbreedingCoeff=-0.0163;MQ=27.11;MQ0=112;MQRankSum=-5.075;QD=4.44;ReadPosRankSum=0.108;VQSLOD=2.5771;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:8:2.70:14,3,0	0/1:7,1:8:11.79:12,0,55	./.	./.	0/0:6,3:9:2.94:0,3,24	./.	1/1:5,1:6:3.01:42,3,0	0/0:4,0:3:5.87:0,6,36	1/1:6,2:6:5.81:54,6,0	0/1:7,5:10:27.29:145,0,27	1/1:6,3:9:0.39:1,0,0	1/1:5,9:13:5.30:145,5,0	0/1:7,9:14:20.62:90,0,21	0/1:4,10:11:10.71:34,0,11	0/0:59,0:49:78.13:0,78,1255	1/1:3,8:11:7.93:81,8,0	0/1:7,2:8:18.22:68,0,18	0/1:5,3:7:80.22:97,0,80	0/1:1,1:2:7.30:35,0,7	1/1:4,5:9:2.82:16,3,0	0/1:26,0:20:0.07:0,0,0	1/1:9,7:16:1.97:6,2,0	1/1:4,2:5:2.64:13,3,0	0/0:14,2:9:2.57:0,3,10	1/1:6,11:16:2.97:35,3,0	0/1:10,2:11:42.89:82,0,43	1/1:3,6:9:12.04:161,12,0	1/1:3,0:2:3.43:19,3,0
chr10	21000783	.	A	AGT	1538.83	PASS	AB=0.935;AC=31;AF=0.574;AN=54;BaseQRankSum=2.560;DP=488;FS=9.920;HRun=0;HaplotypeScore=181.1918;InbreedingCoeff=0.1425;MQ=32.78;MQ0=95;MQRankSum=-4.267;QD=5.27;ReadPosRankSum=-2.347;VQSLOD=1.6801;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:14,1:10:0.13:0,0,0	0/1:8,0:8:27.29:27,0,44	./.	0/0:55,0:2:1.25:0,1,3	0/0:12,0:12:2.98:0,3,21	0/1:10,0:9:0:0,0,0	1/1:9,1:10:5.99:49,6,0	0/1:10,1:6:38.02:78,0,38	1/1:5,0:4:2.82:19,3,0	0/1:20,3:21:67.38:329,0,67	0/1:13,1:14:0.01:0,0,1	1/1:14,1:13:14.20:146,14,0	0/1:16,4:18:0.04:181,0,0	1/1:14,3:13:2.96:35,3,0	0/0:58,0:49:83.31:0,83,1188	1/1:13,1:14:17.71:151,18,0	0/1:8,1:7:43.65:49,0,44	0/1:8,0:7:53.36:53,0,67	1/1:2,0:2:6.01:67,6,0	1/1:15,4:19:5.53:55,6,0	1/1:29,0:23:2.50:40,3,0	0/0:19,1:20:5.67:0,6,50	0/0:9,3:11:1.95:0,2,6	0/1:18,1:11:0:0,0,0	1/1:16,1:17:4.92:38,5,0	0/1:13,1:13:60.71:154,0,61	1/1:10,3:13:20.79:211,21,0	0/0:3,0:2:6:0,6,52
chr10	21000807	.	T	TA	147.22	PASS	AB=0.772;AC=4;AF=0.071;AN=56;BaseQRankSum=4.933;DP=668;FS=9.586;HRun=0;HaplotypeScore=251.4290;InbreedingCoeff=-0.1131;MQ=38.82;MQ0=46;MQRankSum=-3.532;QD=2.94;ReadPosRankSum=-1.239;VQSLOD=1.4334;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:10,6:14:19.61:20,0,74	0/0:11,0:11:20.74:0,21,270	0/0:49,0:9:26.30:0,26,336	0/0:47,0:10:21.40:0,21,254	0/0:18,0:18:2.18:0,2,39	0/1:12,1:11:38.81:39,0,75	0/0:18,0:18:23.86:0,24,340	0/0:41,0:34:99:0,99,1343	0/0:9,0:9:14.96:0,15,182	0/0:39,0:35:84.28:0,84,1179	0/0:21,0:21:1.88:0,2,40	0/0:19,1:17:20.88:0,21,263	0/0:26,0:24:48.12:0,48,646	0/0:23,0:19:13.93:0,14,169	0/0:52,0:49:99:0,113,1573	0/0:19,0:19:36.06:0,36,464	0/1:9,4:11:70.96:71,0,226	0/1:4,4:6:93.39:125,0,93	0/0:19,0:16:42.14:0,42,592	0/0:28,0:28:13.56:0,14,205	0/0:33,8:36:5.55:0,6,82	0/0:28,0:28:8.06:0,8,124	0/0:17,0:17:5.44:0,5,84	0/0:12,5:12:14.63:0,15,205	0/0:26,0:26:16.87:0,17,259	0/0:24,1:24:12.81:0,13,745	0/0:20,0:19:33.11:0,33,463	0/0:4,0:4:9.03:0,9,126
chr10	21000861	.	AGTAT	A	6858.34	PASS	AB=0.739;AC=47;AF=0.839;AN=56;BaseQRankSum=7.014;DP=613;FS=34.965;HRun=0;HaplotypeScore=260.3163;InbreedingCoeff=0.5073;MQ=34.52;MQ0=34;MQRankSum=-3.402;QD=15.07;ReadPosRankSum=2.157;VQSLOD=3.1263;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,8:16:5.89:96,6,0	1/1:2,7:9:17.73:246,18,0	0/0:57,0:16:44.92:0,45,852	0/0:60,0:15:32.77:0,33,579	0/1:13,3:16:0.04:0,0,0	1/1:3,6:8:6.02:101,6,0	1/1:8,14:22:20.22:326,20,0	0/1:18,7:22:5.14:553,0,5	1/1:3,21:24:11.82:183,12,0	1/1:12,13:23:42.03:700,42,0	1/1:8,10:19:2.38:34,2,0	1/1:4,18:20:20.91:290,21,0	1/1:10,16:25:62.70:937,63,0	1/1:5,19:23:11.40:131,11,0	0/0:41,0:41:95.41:0,95,2327	1/1:7,13:20:16.71:377,17,0	1/1:7,6:12:23.17:307,23,0	1/1:2,1:2:5.65:32,6,0	1/1:9,4:9:18.06:320,18,0	1/1:7,13:20:14.65:206,15,0	1/1:27,5:30:6.79:85,7,0	1/1:6,14:20:2.55:23,3,0	1/1:7,11:18:5.69:74,6,0	1/1:4,8:12:8.90:163,9,0	1/1:9,11:20:14.52:246,15,0	0/1:7,15:22:5.98:761,0,6	1/1:8,15:22:41.95:614,42,0	1/1:0,2:2:3.01:53,3,0
chr10	21000862	.	GTA	G	4013.79	PASS	AB=0.941;AC=49;AF=0.875;AN=56;BaseQRankSum=8.351;DP=605;FS=38.893;HRun=0;HaplotypeScore=258.2007;InbreedingCoeff=0.6334;MQ=34.44;MQ0=34;MQRankSum=-3.342;QD=8.90;ReadPosRankSum=1.592;VQSLOD=2.0048;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:16:5.97:47,6,0	1/1:9,0:9:17.75:186,18,0	0/0:56,0:16:44.89:0,45,688	0/0:58,0:13:32.92:0,33,473	0/1:15,0:16:0.39:0,0,0	1/1:9,0:8:8.17:68,8,0	1/1:21,0:21:20.19:135,20,0	1/1:21,3:22:56.98:436,57,0	1/1:24,0:24:10.73:122,11,0	1/1:23,1:22:31.63:399,32,0	1/1:16,3:19:2.22:32,2,0	1/1:21,0:19:17.66:121,18,0	1/1:26,0:25:59.61:557,60,0	1/1:24,0:23:10.67:63,11,0	0/0:40,0:40:96.67:0,97,1719	1/1:20,0:20:22.31:223,22,0	1/1:13,0:12:19.81:139,20,0	1/1:3,0:2:1.14:4,1,0	1/1:13,1:9:17.89:165,18,0	1/1:20,0:20:14.13:128,14,0	1/1:29,3:30:5.78:44,6,0	1/1:20,0:20:1.81:22,2,0	1/1:16,1:17:5.33:35,5,0	1/1:12,0:12:8.62:102,9,0	1/1:20,0:20:14.10:124,14,0	1/1:20,2:22:34.11:511,34,0	1/1:22,0:21:37.43:310,37,0	1/1:2,0:2:3.01:40,3,0
chr10	21000869	.	T	TCTGTGTGA	6777.28	PASS	AB=0.953;AC=42;AF=0.750;AN=56;BaseQRankSum=6.695;DP=654;FS=35.638;HRun=0;HaplotypeScore=293.1212;InbreedingCoeff=0.2208;MQ=33.70;MQ0=38;MQRankSum=-2.259;QD=13.80;ReadPosRankSum=3.343;VQSLOD=2.7802;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:20,0:19:3.86:40,0,4	1/1:8,1:9:18.05:441,18,0	0/0:55,0:14:39.07:0,39,903	0/0:65,0:13:29.22:0,29,703	0/1:7,11:17:0.45:0,0,0	0/1:13,0:12:46.05:75,0,46	1/1:26,0:26:11.74:81,12,0	0/1:21,0:18:82.84:115,0,83	1/1:26,0:26:0.80:212,1,0	1/1:21,0:19:19.84:878,20,0	1/1:18,1:18:3.26:34,3,0	0/1:21,0:20:2.48:221,0,2	1/1:25,1:25:37.23:909,37,0	1/1:25,0:24:8.93:213,9,0	0/0:42,0:42:89.52:0,90,2430	1/1:20,3:23:25.79:655,26,0	1/1:13,1:13:24.02:397,24,0	1/1:3,2:4:5.27:195,5,0	1/1:14,0:9:19.88:384,20,0	0/1:19,0:19:10.36:186,0,10	0/1:45,0:41:5.12:52,0,5	1/1:22,0:22:1.10:3,1,0	1/1:15,0:15:3.41:26,3,0	1/1:13,1:14:8.54:130,9,0	1/1:21,1:22:5.80:177,6,0	0/1:29,0:29:99:854,0,132	1/1:22,0:21:30.27:421,30,0	1/1:2,0:2:3.01:79,3,0
chr10	21000874	.	CTG	C	1918.22	PASS	AB=0.824;AC=39;AF=0.696;AN=56;BaseQRankSum=7.001;DP=671;FS=7.200;HRun=0;HaplotypeScore=273.6364;InbreedingCoeff=0.1646;MQ=33.68;MQ0=35;MQRankSum=-1.718;QD=3.75;ReadPosRankSum=1.528;VQSLOD=1.5774;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:13,6:18:2.99:37,3,0	0/1:8,0:10:12.15:67,0,12	0/0:55,0:14:30.08:0,30,464	0/0:63,0:14:30.05:0,30,405	0/1:13,0:16:0.01:0,0,0	1/1:8,5:12:1.81:83,2,0	1/1:18,8:26:12.10:85,12,0	0/1:15,5:18:99:176,0,115	1/1:18,8:26:3.46:114,3,0	0/1:20,0:22:30.77:149,0,31	1/1:16,0:17:2.38:16,2,0	1/1:14,9:22:7.57:47,8,0	1/1:19,6:24:26.44:237,26,0	1/1:19,7:25:5.14:42,5,0	0/0:42,0:42:84.65:0,85,1350	0/1:19,0:24:3.60:58,0,4	0/1:13,0:13:5.52:6,0,12	0/1:6,0:5:4.56:5,0,27	0/1:15,0:11:8.54:64,0,9	1/1:16,3:19:11.60:99,12,0	1/1:43,6:44:8.63:99,9,0	0/1:16,4:19:0.17:0,0,0	0/1:8,6:14:0:0,0,0	1/1:17,4:20:8.33:65,8,0	1/1:14,7:21:11.05:115,11,0	0/1:25,5:30:56.93:330,0,57	1/1:15,6:20:20.21:156,20,0	1/1:1,1:2:2.98:22,3,0
chr10	21000879	.	T	TGA	2485.08	PASS	AB=0.792;AC=28;AF=0.500;AN=56;BaseQRankSum=4.867;DP=728;FS=49.803;HRun=0;HaplotypeScore=281.4108;InbreedingCoeff=-0.2710;MQ=33.94;MQ0=36;MQRankSum=-3.368;QD=4.94;ReadPosRankSum=3.037;VQSLOD=1.2207;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,4:23:2.83:0,3,19	1/1:7,3:10:3.80:111,4,0	0/0:56,0:14:33.09:0,33,462	0/0:65,0:14:39:0,39,479	0/1:14,1:14:0.43:1,0,0	0/1:9,3:12:29.66:45,0,30	0/0:20,9:29:7.46:0,7,174	0/1:20,7:25:99:317,0,174	0/1:14,12:26:39.97:117,0,40	0/1:20,7:24:99:237,0,119	1/1:14,5:18:1.68:26,2,0	0/1:20,7:24:40.71:61,0,41	0/1:15,11:24:45.27:368,0,45	0/1:22,7:28:23.65:24,0,52	0/0:43,0:43:91.25:0,91,1293	1/1:21,5:24:1.34:183,1,0	1/1:13,3:14:2.53:161,3,0	0/0:8,0:7:0.70:0,1,53	0/1:19,4:14:47.73:118,0,48	0/1:11,8:19:32.36:32,0,45	0/1:55,5:54:9.09:9,0,53	1/1:15,7:21:0.05:1,0,0	0/1:10,5:15:0.49:0,0,1	0/1:20,6:25:19.70:137,0,20	0/1:15,6:22:66.90:98,0,67	0/1:16,11:27:99:410,0,157	0/1:17,5:21:88.91:134,0,89	1/1:4,1:5:3.01:42,3,0
chr10	21000886	.	GTC	G	980.81	PASS	AB=0.993;AC=27;AF=0.482;AN=56;BaseQRankSum=9.003;DP=759;FS=2.133;HRun=0;HaplotypeScore=275.6514;InbreedingCoeff=-0.1463;MQ=35.57;MQ0=30;MQRankSum=-3.835;QD=1.89;ReadPosRankSum=4.953;VQSLOD=2.2804;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:27:2.78:13,3,0	0/1:10,1:11:3.10:39,0,3	0/0:50,0:14:38.92:0,39,516	0/0:68,0:14:31.71:0,32,363	0/0:14,0:13:2.48:0,2,21	1/1:12,0:12:13.39:61,13,0	0/0:35,0:35:1.33:0,1,95	0/1:29,0:27:3.86:4,0,485	1/1:28,0:25:6.83:31,7,0	0/1:25,0:23:99:222,0,174	0/1:15,0:14:0.52:1,0,1	0/1:28,1:25:15.40:15,0,59	0/1:24,0:22:2.08:175,0,2	0/0:29,0:29:12:0,12,91	0/0:45,0:45:87.49:0,87,1568	0/1:24,0:22:28.82:40,0,29	0/1:18,0:16:5.15:5,0,18	0/1:10,0:9:24.09:51,0,24	0/1:27,0:19:59.53:60,0,108	0/1:20,0:20:32.45:36,0,32	0/1:66,0:61:11.16:11,0,46	1/1:24,1:22:1.39:4,1,0	0/1:14,0:13:0:0,0,0	0/1:31,0:30:0.09:0,0,48	0/1:23,0:23:30.34:35,0,30	0/1:27,0:27:99:223,0,133	0/1:23,0:23:53.93:59,0,54	1/1:2,5:7:2.53:43,3,0
chr10	21000889	.	TGTGTGA	T	956.75	PASS	AB=0.984;AC=16;AF=0.286;AN=56;BaseQRankSum=6.887;DP=790;FS=4.714;HRun=0;HaplotypeScore=301.7602;InbreedingCoeff=-0.1935;MQ=37.55;MQ0=29;MQRankSum=-4.319;QD=3.08;ReadPosRankSum=0.591;VQSLOD=2.0914;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:27:2.50:0,2,55	0/1:10,1:11:19.40:95,0,19	0/0:48,0:14:36.12:0,36,774	0/0:71,0:18:32.06:0,32,622	0/0:16,0:15:2.49:0,2,46	0/0:16,0:14:10.51:0,11,137	0/0:35,0:35:27.95:0,28,276	0/0:32,0:30:84.34:0,84,1315	0/1:30,0:27:8.72:9,0,73	0/1:27,2:27:99:320,0,451	0/1:16,0:15:0.09:0,0,0	0/1:30,0:26:17.10:17,0,170	0/1:27,0:25:79.34:215,0,79	0/0:31,0:31:16.08:0,16,192	0/0:47,0:47:85.03:0,85,2546	0/1:23,1:22:66.59:67,0,93	0/0:19,0:17:3.60:0,4,31	0/0:10,0:9:7.18:0,7,116	0/1:28,0:19:75.88:76,0,388	0/1:24,0:24:22.71:23,0,161	0/0:70,0:65:16.30:0,16,273	1/1:23,0:20:1.11:4,1,0	1/1:14,0:13:0.31:0,0,0	0/0:32,0:31:12.02:0,12,124	0/0:23,0:23:1.14:0,1,213	0/1:26,0:26:99:181,0,570	0/1:22,0:22:51.35:51,0,176	0/1:7,0:7:15.42:37,0,15
chr10	21000891	.	TGTGA	T	1202.22	PASS	AB=0.907;AC=20;AF=0.357;AN=56;BaseQRankSum=8.429;DP=801;FS=0.621;HRun=0;HaplotypeScore=291.0105;InbreedingCoeff=-0.1429;MQ=39.96;MQ0=28;MQRankSum=-5.241;QD=2.98;ReadPosRankSum=2.218;VQSLOD=1.6108;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,3:28:2.77:0,3,31	0/1:12,0:12:3.28:56,0,3	0/0:46,1:16:38.61:0,39,694	0/0:69,1:18:34.95:0,35,546	0/0:15,0:14:2.64:0,3,24	0/1:14,1:13:3.20:3,0,69	0/1:31,3:34:43.04:43,0,186	0/0:34,0:32:75.72:0,76,1153	0/1:23,8:28:34.72:35,0,52	0/1:30,0:28:99:147,0,429	1/1:18,0:17:0.46:1,0,0	0/1:26,5:27:84.95:88,0,85	0/1:20,7:25:7.24:364,0,7	0/1:30,3:33:7.79:8,0,166	0/0:48,0:48:88.79:0,89,2056	0/1:25,0:23:14.86:15,0,58	0/0:19,0:17:12.04:0,12,65	0/0:10,0:9:15.05:0,15,136	0/1:28,0:19:20.07:20,0,286	0/1:19,5:24:45.89:46,0,145	0/0:72,0:67:16.38:0,16,201	1/1:21,4:22:3.42:19,3,0	0/1:13,2:14:0.15:0,0,0	0/0:27,3:29:11.84:0,12,122	0/0:19,4:23:3.75:0,4,141	0/1:21,5:26:99:307,0,450	0/1:21,2:23:73.08:141,0,73	1/1:6,1:7:2.43:57,2,0
chr10	21000893	.	TGA	T	1001.40	PASS	AB=1.000;AC=20;AF=0.357;AN=56;BaseQRankSum=5.299;DP=820;FS=10.501;HRun=0;HaplotypeScore=284.4889;InbreedingCoeff=-0.2341;MQ=42.27;MQ0=27;MQRankSum=-2.983;QD=2.52;ReadPosRankSum=-1.521;VQSLOD=0.9312;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:31:2.79:0,3,14	0/1:11,0:11:12.87:67,0,13	0/0:45,0:17:41.26:0,41,498	0/0:72,0:22:32.03:0,32,456	0/0:14,0:13:1.62:0,2,21	0/1:15,0:13:12.21:12,0,21	0/0:34,1:35:17.68:0,18,144	0/0:38,0:36:7.59:0,8,871	0/1:31,0:28:26.12:26,0,29	0/1:30,0:28:99:214,0,292	0/1:18,0:17:0.03:0,0,0	0/1:35,0:30:59.18:59,0,77	0/1:29,0:27:18.02:234,0,18	0/0:32,1:33:16.79:0,17,129	0/0:49,0:49:87.58:0,88,1569	0/1:25,0:23:30.73:36,0,31	0/1:18,0:16:1.33:1,0,20	0/1:10,0:9:22.23:55,0,22	0/1:28,0:19:67.95:68,0,212	0/1:25,0:25:52.78:53,0,86	0/0:71,2:68:18.12:0,18,123	1/1:26,0:23:2.71:18,3,0	0/1:16,0:15:0.08:0,0,0	0/0:30,0:29:11.27:0,11,86	0/1:24,0:24:21.29:21,0,78	0/1:27,0:27:99:201,0,293	0/1:23,0:23:41.59:42,0,86	1/1:7,0:7:2.23:41,2,0
chr10	21000895	.	A	AGT	8381.95	PASS	AB=0.659;AC=44;AF=0.786;AN=56;BaseQRankSum=-0.749;DP=842;FS=5.263;HRun=0;HaplotypeScore=258.1509;InbreedingCoeff=0.3520;MQ=44.42;MQ0=24;MQRankSum=1.139;QD=12.40;ReadPosRankSum=-0.357;VQSLOD=3.9222;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,25:32:2.82:51,3,0	1/1:7,4:11:21.05:293,21,0	0/0:45,0:19:31.47:0,31,362	0/0:75,0:24:32.38:0,32,366	1/1:7,7:13:5.54:91,6,0	1/1:8,7:13:14.86:234,15,0	1/1:11,22:33:26.85:402,27,0	0/1:17,25:40:99:1103,0,208	1/1:20,10:27:20.47:286,20,0	0/1:15,16:32:77.98:694,0,78	1/1:10,9:18:2.49:26,2,0	1/1:21,13:29:32.89:507,33,0	1/1:21,7:27:24.95:279,25,0	1/1:7,24:32:19.89:305,20,0	0/0:46,0:46:77.07:0,77,992	1/1:5,21:24:20.55:296,21,0	0/1:3,17:19:1.88:293,0,2	1/1:0,10:10:18.06:308,18,0	0/1:16,15:22:38.18:595,0,38	1/1:19,4:23:35.55:521,36,0	1/1:26,50:74:15.96:304,16,0	1/1:21,5:23:5.13:88,5,0	0/1:9,5:14:0.07:0,0,0	1/1:5,27:31:11.99:205,12,0	1/1:14,11:25:26.59:406,27,0	0/1:18,8:26:58.18:503,0,58	1/1:6,19:25:29.82:443,30,0	1/1:8,1:9:4.62:147,5,0
chr10	21001772	.	CAAAACA	C	20575.25	PASS	AB=0.529;AC=49;AF=0.875;AN=56;BaseQRankSum=6.786;DP=658;FS=2.549;HRun=0;HaplotypeScore=162.1544;InbreedingCoeff=0.7977;MQ=58.53;MQ0=2;MQRankSum=-10.042;QD=38.46;ReadPosRankSum=5.561;VQSLOD=4.8583;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,30:33:51.16:913,51,0	1/1:0,9:9:12.04:283,12,0	0/0:43,0:36:96.91:0,97,2275	0/0:45,0:27:69.21:0,69,1371	1/1:0,10:10:17.33:223,17,0	1/1:0,21:21:45.15:944,45,0	1/1:3,28:31:48.16:977,48,0	1/1:4,31:35:93.31:1874,93,0	1/1:0,25:25:45.05:1046,45,0	1/1:1,22:23:60.20:1185,60,0	1/1:0,13:13:24.07:316,24,0	0/1:3,24:27:59.01:1012,0,59	1/1:1,31:32:66.04:1519,66,0	1/1:0,29:29:60.20:1274,60,0	0/0:35,0:34:99:0,102,2818	1/1:0,24:24:54.19:1259,54,0	1/1:0,26:26:30.10:671,30,0	1/1:0,19:20:24.08:490,24,0	1/1:0,21:21:63.17:1059,63,0	1/1:0,13:13:33.10:559,33,0	1/1:2,19:21:12.04:191,12,0	1/1:1,21:22:54.17:921,54,0	1/1:0,18:18:30.50:488,31,0	1/1:1,13:14:16.19:329,16,0	1/1:0,18:18:30.10:564,30,0	1/1:2,21:23:57.19:1155,57,0	1/1:1,23:24:51.17:1189,51,0	1/1:3,0:3:9.03:133,9,0
chr10	21001777	.	CA	C	5257.82	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=10.166;DP=643;FS=1.444;HRun=4;HaplotypeScore=173.3987;InbreedingCoeff=0.8435;MQ=59.32;MQ0=2;MQRankSum=-9.906;QD=10.23;ReadPosRankSum=6.145;VQSLOD=2.0542;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:30:35.87:258,36,0	1/1:9,0:9:11.14:51,11,0	0/0:46,0:40:91.57:0,92,1284	0/0:48,1:29:55.31:0,55,717	1/1:10,0:10:9.03:107,9,0	1/1:21,0:21:37.34:258,37,0	1/1:28,0:28:37.08:239,37,0	1/1:31,0:31:76.02:504,76,0	1/1:25,0:25:42.67:253,43,0	1/1:22,0:22:31.26:250,31,0	1/1:13,0:13:15.04:176,15,0	1/1:25,0:25:3.35:189,3,0	1/1:31,0:31:59.15:295,59,0	1/1:29,0:29:45.93:265,46,0	0/0:34,0:33:90.30:0,90,1257	1/1:24,0:24:50.73:262,51,0	1/1:26,0:26:25.18:117,25,0	1/1:20,0:20:15.94:76,16,0	1/1:21,0:21:23.06:263,23,0	1/1:13,0:13:23.56:236,24,0	1/1:19,0:19:7.26:77,7,0	1/1:21,0:21:41.17:380,41,0	1/1:18,0:18:12.82:100,13,0	1/1:13,0:13:13.28:105,13,0	1/1:18,0:18:16.72:131,17,0	1/1:21,0:21:35.04:311,35,0	1/1:23,0:23:47.88:246,48,0	1/1:0,3:3:9.03:108,9,0
chr10	21002077	.	TGC	T	25715.01	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=12.991;DP=673;FS=7.872;HRun=0;HaplotypeScore=197.1421;InbreedingCoeff=0.9978;MQ=89.70;MQ0=0;MQRankSum=-11.862;QD=43.96;ReadPosRankSum=5.602;VQSLOD=4.5568;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:0,34:34:90.11:1349,90,0	1/1:0,12:11:30.10:489,30,0	0/0:33,0:33:93.08:0,93,1761	0/0:29,0:29:80.39:0,80,1561	1/1:0,16:16:45.02:646,45,0	1/1:0,21:21:60.20:978,60,0	1/1:0,37:37:99:1727,108,0	1/1:0,26:26:71.83:1150,72,0	1/1:1,29:30:23.34:1260,23,0	1/1:0,17:16:48.16:783,48,0	1/1:0,11:11:27.09:440,27,0	1/1:0,24:24:69.24:1124,69,0	1/1:0,36:36:99:1710,105,0	1/1:0,33:33:96.26:1534,96,0	0/0:26,0:26:78.27:0,78,1585	1/1:0,43:43:99:2047,126,0	1/1:0,28:28:69.24:1125,69,0	1/1:0,10:10:27.09:440,27,0	1/1:0,23:23:69.24:1111,69,0	1/1:0,10:10:30.06:451,30,0	1/1:0,25:25:54.12:850,54,0	1/1:0,22:22:54.03:791,54,0	1/1:0,15:15:42.14:684,42,0	1/1:0,22:22:57.19:929,57,0	1/1:0,17:17:48.16:782,48,0	1/1:0,26:26:74.96:1223,75,0	1/1:0,35:36:99:1600,99,0	1/1:0,11:11:30.10:489,30,0
chr10	21002398	.	G	GT	122.64	PASS	AB=0.925;AC=12;AF=0.214;AN=56;BaseQRankSum=10.283;DP=488;FS=1.021;HRun=0;HaplotypeScore=152.6600;InbreedingCoeff=-0.0973;MQ=62.38;MQ0=7;MQRankSum=-4.968;QD=0.68;ReadPosRankSum=-0.941;VQSLOD=2.6915;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:19,2:21:20.09:20,0,80	0/0:8,3:10:5.55:0,6,67	0/0:17,0:14:42.11:0,42,537	0/0:21,0:17:34.26:0,34,529	0/1:14,2:15:6.30:6,0,61	0/1:13,2:15:2.35:2,0,46	0/0:27,0:27:9.44:0,9,80	0/0:33,0:31:16.93:0,17,231	0/0:16,0:16:12.77:0,13,84	0/1:17,2:19:52.40:52,0,104	0/0:13,3:16:8.59:0,9,76	0/1:18,1:19:39.82:40,0,72	0/0:16,0:16:11.51:0,12,103	0/1:24,0:24:12.39:12,0,57	0/0:16,0:15:42.08:0,42,533	0/0:22,2:24:11.41:0,11,100	0/1:10,3:13:49.56:50,0,50	0/0:8,1:9:7.76:0,8,107	0/0:13,0:11:25.71:0,26,139	0/1:20,0:20:16.87:17,0,74	0/0:16,0:16:11.19:0,11,80	0/0:16,0:15:5.05:0,5,43	0/0:13,1:14:2.40:0,2,37	0/1:10,0:10:4.71:5,0,13	0/1:15,2:17:8.10:8,0,79	0/0:24,0:22:4.51:0,5,139	0/0:18,0:17:18.67:0,19,113	1/1:6,1:7:10.86:51,11,0
chr10	21002399	.	G	GTGT	2207.61	PASS	AB=0.955;AC=25;AF=0.446;AN=56;BaseQRankSum=12.215;DP=592;FS=2.472;HRun=0;HaplotypeScore=228.6127;InbreedingCoeff=-0.6330;MQ=55.67;MQ0=7;MQRankSum=-7.255;QD=4.26;ReadPosRankSum=1.000;VQSLOD=2.1848;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:23:27.55:0,28,124	0/1:11,2:13:37.54:41,0,38	0/0:16,0:13:39.06:0,39,464	0/0:20,0:16:38.11:0,38,509	0/1:18,2:19:4.44:4,0,57	0/1:20,1:21:33.33:93,0,33	0/1:31,0:30:16.89:17,0,71	0/1:37,0:35:99:159,0,189	0/1:20,0:20:22.96:23,0,55	0/1:26,1:27:67.91:381,0,68	0/1:14,3:17:30.97:31,0,61	0/1:19,0:20:57.53:138,0,58	0/1:21,0:21:50.50:50,0,80	0/1:28,0:28:64.58:92,0,65	0/0:15,0:14:42.07:0,42,597	0/1:24,2:26:32.71:33,0,73	0/1:16,3:19:58.18:58,0,86	0/1:12,1:12:23.34:23,0,86	0/1:22,0:19:80.21:292,0,80	0/1:23,0:23:57.25:57,0,77	0/1:19,0:19:50.72:57,0,51	0/1:23,0:21:37.54:46,0,38	0/1:21,0:22:42.73:45,0,43	0/1:15,0:15:6.92:34,0,7	0/1:19,0:20:63.75:82,0,64	0/1:30,0:28:51.08:463,0,51	0/1:20,0:19:32.38:32,0,59	1/1:6,0:6:14.34:115,14,0
chr10	21002434	.	GCGCGCGCGCA	G	2343.32	PASS	AB=0.953;AC=17;AF=0.315;AN=54;BaseQRankSum=-6.020;DP=367;FS=17.681;HRun=0;HaplotypeScore=179.7477;InbreedingCoeff=0.0384;MQ=41.10;MQ0=3;MQRankSum=0.035;QD=11.60;ReadPosRankSum=-1.161;VQSLOD=1.1240;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:12,0:12:0.47:1,0,0	0/0:7,1:8:2.95:0,3,19	0/0:5,0:2:5.68:0,6,37	0/0:8,0:6:5.20:0,5,78	1/1:6,4:11:3.48:94,3,0	0/1:18,0:17:44.21:44,0,101	0/0:22,0:21:5.95:0,6,119	0/1:16,0:14:24.69:214,0,25	0/0:9,0:9:9.03:0,9,192	0/1:13,7:19:81.88:777,0,82	0/0:5,4:9:2.51:0,3,17	0/0:20,0:20:21.07:0,21,409	0/1:19,0:19:65.60:66,0,166	0/0:19,0:19:18.06:0,18,390	0/0:6,0:6:15.05:0,15,681	0/0:10,1:11:2.99:0,3,23	0/1:12,2:14:28.80:269,0,29	1/1:5,3:8:6.93:393,7,0	1/1:8,2:10:20.15:338,20,0	0/0:11,0:11:6.02:0,6,122	./.	0/1:18,0:16:0:0,0,0	0/1:19,0:19:54.73:55,0,55	0/0:13,0:13:6.08:0,6,128	0/0:13,0:12:9.03:0,9,174	0/1:23,1:22:99:185,0,440	0/1:13,0:13:56.93:57,0,83	0/0:5,0:5:12.04:0,12,205
chr10	21002436	.	GCGCGCGCA	G	2278.77	PASS	AB=0.839;AC=18;AF=0.333;AN=54;BaseQRankSum=-6.287;DP=377;FS=10.840;HRun=0;HaplotypeScore=174.0081;InbreedingCoeff=0.1390;MQ=40.58;MQ0=2;MQRankSum=-0.946;QD=10.75;ReadPosRankSum=-0.726;VQSLOD=2.0670;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:4,8:12:0:0,0,0	0/1:8,0:8:6.27:14,0,6	0/0:6,0:2:5.17:0,5,20	0/0:8,0:6:5.51:0,6,71	1/1:11,0:11:3.48:77,3,0	0/1:14,7:20:33.16:62,0,33	0/0:17,5:21:5.91:0,6,48	1/1:6,9:13:23.54:299,24,0	0/0:9,0:9:9.01:0,9,90	0/1:20,0:19:42.09:648,0,42	0/0:8,0:8:2.78:0,3,17	0/0:17,3:20:20.47:0,20,199	0/1:12,7:19:67.48:67,0,73	0/0:20,3:23:18:0,18,180	0/0:7,0:7:18.05:0,18,569	0/0:12,0:12:2.88:0,3,15	0/1:14,0:14:17.37:214,0,17	1/1:8,0:8:12.52:326,13,0	1/1:10,0:10:20.82:300,21,0	0/0:9,1:10:6:0,6,53	./.	0/1:12,5:16:0:0,0,0	0/1:14,7:21:19.05:62,0,19	0/0:7,6:13:6.44:0,6,59	0/0:10,4:13:8.93:0,9,66	0/1:21,2:21:99:270,0,181	0/1:11,2:13:16.58:99,0,17	0/0:5,0:5:11.86:0,12,80
chr10	21002440	.	GCGCA	G	1446	PASS	AB=0.976;AC=24;AF=0.462;AN=52;BaseQRankSum=-5.057;DP=372;FS=9.137;HRun=0;HaplotypeScore=165.3624;InbreedingCoeff=0.4051;MQ=40.99;MQ0=0;MQRankSum=-0.903;QD=7.09;ReadPosRankSum=-0.220;VQSLOD=2.2976;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:12,0:12:0.47:1,0,0	1/1:7,1:8:2.04:6,2,0	0/0:5,0:2:4.50:0,4,16	0/0:7,0:6:5.24:0,5,28	1/1:12,0:12:3.01:43,3,0	0/1:20,0:20:3.80:28,0,4	0/0:21,0:20:4.65:0,5,16	1/1:12,0:12:23.54:192,24,0	0/0:9,0:9:7.89:0,8,34	1/1:22,0:22:3.98:416,4,0	0/0:9,0:9:2.79:0,3,18	0/0:21,0:21:7.20:0,7,81	0/1:18,1:19:28.99:38,0,29	0/0:20,2:22:15.95:0,16,79	0/0:7,0:7:21.04:0,21,363	1/1:12,0:12:0.06:1,0,0	1/1:11,0:11:10.48:150,10,0	1/1:8,0:8:22:186,22,0	1/1:10,0:10:29.60:245,30,0	0/0:13,0:13:5.36:0,5,22	./.	./.	0/1:20,1:21:3.88:37,0,4	0/0:11,0:11:5.85:0,6,23	0/0:13,1:13:5.07:0,5,16	0/1:23,0:21:45.56:157,0,46	1/1:13,1:14:3.18:106,3,0	0/0:5,0:5:8.37:0,8,26
chr10	21002442	.	GCA	G	1116.66	PASS	AB=0.966;AC=29;AF=0.558;AN=52;BaseQRankSum=-2.311;DP=351;FS=2.014;HRun=0;HaplotypeScore=159.2335;InbreedingCoeff=0.4049;MQ=44.14;MQ0=0;MQRankSum=-2.363;QD=4.54;ReadPosRankSum=0.658;VQSLOD=2.8715;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:11,1:12:0:0,0,0	1/1:9,0:9:2.37:8,2,0	0/0:6,0:3:4.23:0,4,15	0/0:8,0:7:6.42:0,6,43	1/1:12,0:12:3:26,3,0	1/1:20,0:20:4.56:21,5,0	0/1:18,1:19:0.15:0,0,0	1/1:9,0:9:23.47:155,23,0	0/0:7,0:7:2.60:0,3,6	1/1:22,0:22:33.16:351,33,0	0/0:9,0:9:2.53:0,3,12	0/1:19,0:19:3.43:3,0,19	0/1:16,0:16:5.64:21,0,6	0/0:20,1:21:7.30:0,7,30	0/0:7,0:7:15.92:0,16,224	1/1:4,8:12:2.17:9,2,0	1/1:11,0:11:15.94:122,16,0	1/1:8,0:8:17.73:133,18,0	1/1:10,0:10:29.50:199,29,0	0/0:11,1:12:2.13:0,2,5	./.	./.	1/1:20,1:21:1.47:22,1,0	0/0:10,1:11:2.13:0,2,5	1/1:12,0:12:3.28:9,3,0	0/1:20,1:19:17.76:121,0,18	1/1:12,1:13:9.22:60,9,0	0/0:5,0:5:0.08:0,0,1
chr10	21002444	.	A	ACG	3193.36	PASS	AC=44;AF=0.846;AN=52;BaseQRankSum=1.172;DP=355;FS=0.000;HRun=0;HaplotypeScore=164.9071;InbreedingCoeff=0.5168;MQ=44.11;MQ0=0;MQRankSum=-3.270;QD=10.57;ReadPosRankSum=2.332;VQSLOD=3.2476;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:2.50:0,2,9	1/1:8,1:9:3.01:38,3,0	0/0:6,0:3:2.98:0,3,22	0/0:8,0:7:5.73:0,6,46	1/1:12,0:13:2.13:9,2,0	1/1:18,2:20:9.03:125,9,0	1/1:13,5:18:6.02:101,6,0	1/1:9,0:9:18.53:189,19,0	1/1:1,5:6:9.03:155,9,0	1/1:22,1:23:51.40:370,51,0	1/1:7,2:9:2.04:6,2,0	1/1:8,11:19:18.06:291,18,0	1/1:13,3:16:11.83:163,12,0	1/1:17,4:21:4.82:194,5,0	0/0:7,0:7:15.05:0,15,201	1/1:12,1:13:3.01:43,3,0	1/1:9,2:11:17.07:150,17,0	1/1:7,1:8:6.78:146,7,0	1/1:12,0:12:33.72:281,34,0	1/1:5,6:11:6.02:102,6,0	./.	./.	1/1:20,1:21:5.85:65,6,0	1/1:10,2:12:5.48:102,5,0	1/1:10,2:12:9.02:128,9,0	1/1:12,9:20:33.64:371,34,0	1/1:11,2:13:13.94:122,14,0	1/1:1,4:5:11.99:173,12,0
chr10	21002820	.	GT	G	19602.58	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=0.978;DP=705;FS=2.791;HRun=4;HaplotypeScore=76.9257;InbreedingCoeff=0.9982;MQ=86.42;MQ0=0;MQRankSum=-8.754;QD=31.21;ReadPosRankSum=3.958;VQSLOD=5.4753;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,20:21:54.17:648,54,0	1/1:0,7:7:21.06:252,21,0	0/0:32,0:32:73.82:0,74,1072	0/0:18,0:18:40.45:0,40,514	1/1:2,27:29:75.23:897,75,0	1/1:0,32:32:87.27:1044,87,0	1/1:0,25:25:66.20:791,66,0	1/1:3,28:31:81.21:939,81,0	1/1:1,23:24:69.17:811,69,0	1/1:4,36:40:99:1219,105,0	1/1:0,20:20:54.16:647,54,0	1/1:1,27:28:75.23:900,75,0	1/1:0,35:35:99:1224,102,0	1/1:1,26:27:69.13:795,69,0	0/0:27,0:27:81.26:0,81,1116	1/1:2,27:29:72.18:848,72,0	1/1:1,23:24:57.13:667,57,0	1/1:1,23:24:54.17:648,54,0	1/1:0,20:20:60.12:680,60,0	1/1:0,19:19:57.13:667,57,0	1/1:0,20:20:54.17:648,54,0	1/1:0,27:27:63.19:752,63,0	1/1:1,21:22:42.12:499,42,0	1/1:0,30:30:78.24:936,78,0	1/1:0,21:20:48.15:576,48,0	1/1:0,25:25:75.23:898,75,0	1/1:0,38:38:99:1295,108,0	1/1:1,9:10:27.08:324,27,0
chr10	21003117	.	G	GC	19531.35	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=6.347;DP=647;FS=1.441;HRun=4;HaplotypeScore=133.3863;InbreedingCoeff=0.9834;MQ=85.68;MQ0=0;MQRankSum=-10.709;QD=35.13;ReadPosRankSum=4.868;VQSLOD=3.1853;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,31:41:93.31:1259,93,0	1/1:1,4:5:12.04:164,12,0	0/0:35,0:35:93.08:0,93,1010	0/0:22,0:22:53.87:0,54,549	1/1:4,30:34:78.22:1043,78,0	1/1:1,27:28:81.26:1088,81,0	1/1:2,14:16:48.08:613,48,0	1/1:6,12:18:42.13:561,42,0	1/1:2,23:25:69.22:927,69,0	1/1:8,25:33:81.24:1071,81,0	1/1:4,12:16:42.12:542,42,0	1/1:5,27:32:81.27:1099,81,0	1/1:2,25:27:78.22:1041,78,0	1/1:4,24:28:81.16:1097,81,0	0/0:34,0:34:96.26:0,96,1079	1/1:2,21:23:69.22:926,69,0	1/1:2,23:25:63.41:841,63,0	1/1:5,19:24:66.22:897,66,0	1/1:5,11:16:42.13:557,42,0	1/1:3,20:23:60.20:810,60,0	1/1:3,19:22:51.13:672,51,0	1/1:1,19:20:57.14:744,57,0	1/1:2,12:14:36.12:485,36,0	1/1:5,18:24:56.72:752,57,0	1/1:0,12:12:36.12:492,36,0	1/1:3,20:23:66.21:882,66,0	1/1:2,20:21:60.20:815,60,0	1/1:4,1:5:15:154,15,0
chr10	21003161	.	AT	A	18460.47	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=8.811;DP=622;FS=0.919;HRun=2;HaplotypeScore=125.4952;InbreedingCoeff=0.9777;MQ=86.45;MQ0=0;MQRankSum=-11.055;QD=34.25;ReadPosRankSum=4.304;VQSLOD=4.3709;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,40:41:99:1361,105,0	1/1:2,2:4:12.04:155,12,0	0/0:21,0:21:63.21:0,63,933	0/0:32,0:33:88.41:0,88,1153	1/1:0,25:25:69.22:894,69,0	1/1:0,22:22:60.20:778,60,0	1/1:2,18:20:51.17:661,51,0	1/1:1,25:26:75.20:929,75,0	1/1:3,16:19:48.16:620,48,0	1/1:0,35:35:99:1284,99,0	1/1:0,16:16:45.15:584,45,0	1/1:1,30:31:81.26:1050,81,0	1/1:3,24:27:75.20:927,75,0	1/1:4,21:25:66.21:855,66,0	0/0:29,0:29:87.28:0,87,1281	1/1:0,27:27:72.23:930,72,0	1/1:1,25:26:69.22:895,69,0	1/1:1,23:24:57.19:739,57,0	1/1:1,17:18:48.16:622,48,0	1/1:2,15:17:48.14:608,48,0	1/1:2,16:18:45.15:584,45,0	1/1:3,19:22:57.17:726,57,0	1/1:1,9:10:24.08:311,24,0	1/1:1,18:19:48.16:622,48,0	1/1:1,15:16:42.14:545,42,0	1/1:0,28:28:84.26:1076,84,0	1/1:0,18:18:42.14:545,42,0	1/1:0,5:5:12.04:156,12,0
chr10	21004452	.	GGA	G	1917.43	PASS	AB=1.000;AC=33;AF=0.589;AN=56;BaseQRankSum=13.776;DP=573;FS=7.848;HRun=0;HaplotypeScore=123.4555;InbreedingCoeff=0.9086;MQ=78.87;MQ0=1;MQRankSum=-1.757;QD=5.48;ReadPosRankSum=2.602;VQSLOD=2.6040;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:29:47.77:144,48,0	0/0:9,0:9:27.09:0,27,511	0/0:17,0:16:31.87:0,32,524	0/0:20,0:20:13.37:0,13,473	0/0:15,0:15:39.09:0,39,596	1/1:16,0:16:10.77:115,11,0	1/1:29,3:32:54.86:274,55,0	1/1:33,1:34:68.61:365,69,0	1/1:22,0:22:32.83:99,33,0	0/0:22,0:22:60.13:0,60,959	0/0:12,0:12:30.03:0,30,463	1/1:25,1:26:17.34:130,17,0	1/1:18,1:18:31.01:127,31,0	1/1:15,0:15:23.50:72,24,0	0/0:33,0:33:98.91:0,99,1748	0/0:26,0:26:78.14:0,78,1296	0/0:31,0:31:90.23:0,90,1539	0/0:17,0:17:51.16:0,51,929	0/0:21,0:21:63.03:0,63,977	1/1:14,1:15:28.11:120,28,0	1/1:25,0:25:25.03:115,25,0	1/1:18,0:18:15.04:59,15,0	1/1:11,0:11:11.47:33,11,0	1/1:25,0:25:41.78:129,42,0	1/1:21,0:21:41.51:162,42,0	1/1:9,0:9:15.29:47,15,0	0/1:15,0:15:13.77:60,0,14	1/1:18,0:18:26.68:92,27,0
chr10	21004453	.	GA	G	10876.56	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=5.089;DP=563;FS=7.202;HRun=1;HaplotypeScore=80.7629;InbreedingCoeff=0.9762;MQ=79.18;MQ0=2;MQRankSum=-1.385;QD=31.71;ReadPosRankSum=1.188;VQSLOD=4.0717;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,28:29:69.23:940,69,0	0/0:9,0:9:27.09:0,27,386	0/0:17,0:16:26.38:0,26,388	0/0:21,0:21:3.93:0,4,345	0/0:14,0:14:39:0,39,444	1/1:4,11:15:34.43:503,34,0	1/1:3,29:32:71.92:916,72,0	1/1:1,32:33:92.95:1063,93,0	1/1:0,22:22:48.16:652,48,0	0/0:20,0:20:60.13:0,60,764	0/0:12,0:12:27.03:0,27,342	1/1:1,24:25:57.08:752,57,0	1/1:2,17:18:45.04:585,45,0	1/1:0,15:15:33.11:450,33,0	0/0:33,0:33:72.38:0,72,1248	0/0:26,0:26:75.14:0,75,980	0/0:30,0:30:90.24:0,90,1205	0/0:17,0:17:51.16:0,51,706	0/0:21,0:21:63.02:0,63,766	1/1:1,14:15:39.02:505,39,0	1/1:3,22:24:63.38:916,63,0	1/1:0,18:18:39.11:500,39,0	1/1:0,10:10:17.67:240,18,0	1/1:0,25:25:57.19:787,57,0	1/1:6,15:21:53.42:643,53,0	1/1:0,8:8:24.08:324,24,0	1/1:3,11:14:38.32:495,38,0	1/1:6,11:17:51:605,51,0
chr10	21004763	.	T	TC	3066.91	PASS	AB=0.838;AC=20;AF=0.357;AN=56;BaseQRankSum=0.663;DP=690;FS=5.977;HRun=2;HaplotypeScore=233.9747;InbreedingCoeff=-0.5774;MQ=39.47;MQ0=1;MQRankSum=-4.815;QD=5.22;ReadPosRankSum=5.047;VQSLOD=0.6942;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,1:28:17.67:0,18,639	0/1:10,3:13:99:121,0,274	0/0:2,0:2:6.02:0,6,77	0/0:10,0:9:30.09:0,30,373	0/1:37,13:50:99:170,0,831	0/1:21,2:23:23.02:23,0,615	0/1:12,1:13:25.14:25,0,272	0/1:17,7:24:99:259,0,344	0/1:16,2:18:31.59:32,0,500	0/1:27,10:37:99:273,0,838	0/1:35,9:44:99:172,0,903	0/1:25,3:28:52.57:53,0,737	0/0:15,1:16:6.06:0,6,452	0/0:19,1:20:12.58:0,13,542	0/1:26,8:33:99:194,0,790	0/1:16,5:21:99:159,0,359	0/1:5,1:6:26.83:27,0,141	0/0:8,0:8:14.77:0,15,147	0/1:6,1:7:15.91:16,0,116	0/1:37,17:54:99:539,0,1094	0/0:5,0:5:13.28:0,13,153	0/1:36,12:48:99:358,0,1006	0/1:32,5:37:44.39:44,0,984	0/0:12,1:13:23.97:0,24,290	0/1:47,10:57:99:225,0,1289	0/1:26,6:32:99:167,0,807	0/1:22,12:34:99:350,0,652	0/1:7,1:8:17.99:18,0,233
chr10	21004769	.	TC	T	1833.91	PASS	AB=0.872;AC=18;AF=0.321;AN=56;BaseQRankSum=11.138;DP=732;FS=200.462;HRun=2;HaplotypeScore=240.9706;InbreedingCoeff=-0.4611;MQ=42.64;MQ0=1;MQRankSum=-9.984;QD=3.14;ReadPosRankSum=0.262;VQSLOD=-0.4145;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,1:31:16.58:0,17,773	0/1:9,4:13:74.54:75,0,209	0/0:2,0:2:6.02:0,6,90	0/0:13,0:12:39.07:0,39,535	0/1:44,9:53:99:145,0,737	0/0:24,2:26:17.27:0,17,705	0/1:12,2:14:13.86:14,0,288	0/0:28,0:28:75.08:0,75,846	0/1:18,0:18:5.44:5,0,521	0/1:37,3:40:59.02:59,0,1006	0/1:37,9:46:99:160,0,734	0/1:28,1:29:27.07:27,0,771	0/1:12,4:16:99:103,0,317	0/1:21,0:21:52.89:53,0,547	0/1:31,3:33:12.88:13,0,924	0/1:20,1:21:3.40:3,0,370	0/0:6,0:6:18.02:0,18,239	0/0:9,0:9:26.63:0,27,241	0/0:10,0:10:24.01:0,24,312	0/1:44,11:55:99:188,0,1013	0/0:7,0:7:14.07:0,14,243	0/1:41,9:50:99:192,0,795	0/1:33,6:39:99:145,0,816	0/0:16,0:16:32.56:0,33,442	0/1:47,11:58:99:425,0,640	0/1:27,6:33:99:229,0,551	0/1:30,5:35:99:107,0,605	0/1:5,4:9:45.74:46,0,173
chr10	21004901	.	CCG	C	4814.10	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=5.824;DP=568;FS=29.807;HRun=0;HaplotypeScore=136.8739;InbreedingCoeff=0.9954;MQ=79.63;MQ0=0;MQRankSum=-2.094;QD=40.12;ReadPosRankSum=-0.490;VQSLOD=3.2877;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:69.21:0,69,882	1/1:0,7:7:21.07:321,21,0	0/0:15,0:15:41.94:0,42,736	0/0:22,0:22:60.14:0,60,1080	1/1:0,20:20:39.01:595,39,0	0/0:24,0:24:66.21:0,66,845	0/0:30,0:30:87.24:0,87,1034	0/0:25,0:25:75.20:0,75,830	0/0:23,0:23:69.22:0,69,895	1/1:0,11:11:33.10:492,33,0	1/1:0,10:10:27.09:411,27,0	0/0:37,0:37:99:0,108,1370	0/0:23,0:23:63.18:0,63,785	0/0:26,0:26:78.25:0,78,1004	0/0:31,0:31:90.31:0,90,1794	1/1:0,21:21:57.19:858,57,0	1/1:3,22:25:68.89:1032,69,0	1/1:0,13:13:33.11:507,33,0	1/1:0,13:13:39.13:598,39,0	0/0:19,0:19:51.17:0,51,714	0/0:32,0:32:90.26:0,90,1078	0/0:17,0:17:48.16:0,48,638	0/0:8,0:8:21.07:0,21,293	0/0:34,0:33:93.29:0,93,1124	0/0:15,0:15:42.14:0,42,578	0/0:8,0:8:24.07:0,24,303	0/0:27,0:27:81.25:0,81,1073	0/0:5,0:5:15.05:0,15,189
chr10	21005332	.	GTTCCAACCAGA	G	41653.28	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=8.825;DP=609;FS=0.000;HRun=0;HaplotypeScore=243.9788;InbreedingCoeff=0.9966;MQ=86.06;MQ0=0;MQRankSum=-14.324;QD=80.72;ReadPosRankSum=4.492;VQSLOD=4.1900;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,24:25:60.21:2069,60,0	1/1:3,11:15:36.12:1303,36,0	0/0:36,0:36:95.76:0,96,4658	0/0:25,0:25:72.21:0,72,3105	1/1:3,27:30:63.17:2012,63,0	1/1:4,22:26:63.22:2215,63,0	1/1:1,18:19:48.16:1666,48,0	1/1:3,22:25:63.19:2002,63,0	1/1:2,13:15:36.12:1304,36,0	1/1:3,23:27:66.14:2116,66,0	1/1:3,17:20:45.15:1416,45,0	1/1:0,16:16:48.16:1723,48,0	1/1:0,12:12:30.10:1087,30,0	1/1:2,18:20:51.18:1844,51,0	0/0:32,0:32:93.32:0,93,5419	1/1:1,31:32:81.28:2934,81,0	1/1:5,21:26:45.15:1614,45,0	1/1:2,14:16:36.12:1305,36,0	1/1:4,14:18:42.14:1359,42,0	1/1:3,22:25:66.14:1999,66,0	1/1:5,13:18:19.38:442,19,0	1/1:2,22:24:60.20:1975,60,0	1/1:3,13:16:39.13:1303,39,0	1/1:0,13:13:30.10:913,30,0	1/1:1,18:19:54.18:1886,54,0	1/1:1,16:18:51.17:1719,51,0	1/1:4,29:33:75.26:2715,75,0	1/1:0,8:8:24.08:732,24,0
chr10	21005529	.	A	AG	15519.56	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-10.111;DP=719;FS=6.126;HRun=4;HaplotypeScore=114.7120;InbreedingCoeff=0.9686;MQ=84.50;MQ0=0;MQRankSum=-4.608;QD=34.11;ReadPosRankSum=0.312;VQSLOD=3.9650;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,32:35:90.16:1182,90,0	0/0:14,0:14:39.09:0,39,432	0/0:25,0:25:63.13:0,63,689	0/0:24,0:24:1.49:0,1,479	0/0:23,0:23:69.19:0,69,775	1/1:2,29:31:78.12:1017,78,0	1/1:3,18:21:48.16:656,48,0	1/1:2,33:35:96.28:1273,96,0	1/1:1,22:23:66.17:880,66,0	0/0:32,0:32:87.24:0,87,974	0/0:28,0:28:81.23:0,81,919	1/1:2,24:26:60.03:767,60,0	1/1:1,24:25:57.10:779,57,0	1/1:1,33:34:96.25:1281,96,0	0/0:29,0:29:81.20:0,81,900	0/0:34,1:35:75.25:0,75,987	0/0:25,0:25:69.15:0,69,768	0/0:16,0:16:42.10:0,42,467	0/0:13,0:13:39.11:0,39,435	1/1:0,25:25:72.20:961,72,0	1/1:2,26:28:72.24:985,72,0	1/1:1,18:19:54.18:738,54,0	1/1:0,17:17:38.67:533,39,0	1/1:6,31:37:78.26:1067,78,0	1/1:2,16:18:48.16:656,48,0	1/1:2,24:26:69.21:922,69,0	1/1:4,41:45:99:1411,105,0	1/1:0,10:10:30.10:410,30,0
chr10	21005956	.	TA	T	9610.21	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=5.590;DP=587;FS=21.961;HRun=6;HaplotypeScore=106.7227;InbreedingCoeff=0.9761;MQ=80.07;MQ0=0;MQRankSum=-1.356;QD=27.94;ReadPosRankSum=1.326;VQSLOD=3.1800;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,25:26:72.18:773,72,0	0/0:7,0:7:21.07:0,21,276	0/0:23,0:23:36.17:0,36,424	0/0:28,1:25:41.18:0,41,463	0/0:28,0:28:81.26:0,81,1064	1/1:1,26:27:69.17:742,69,0	1/1:2,12:14:36.09:387,36,0	1/1:5,23:28:66.14:694,66,0	1/1:1,16:17:42.11:451,42,0	0/0:24,0:24:66.20:0,66,846	0/0:21,0:21:57.17:0,57,734	1/1:1,16:17:45.11:484,45,0	1/1:3,22:25:63.16:674,63,0	1/1:0,17:17:48.12:516,48,0	0/0:21,0:21:63.19:0,63,814	0/0:25,0:25:66.21:0,66,856	0/0:29,0:29:84.26:0,84,1091	0/0:23,0:23:63.20:0,63,823	0/0:12,0:12:30.10:0,30,394	1/1:4,27:31:78.19:838,78,0	1/1:0,4:4:9.02:97,9,0	1/1:1,14:15:39.10:419,39,0	1/1:1,17:18:48.12:516,48,0	1/1:0,17:17:39.10:419,39,0	1/1:2,26:28:78.20:838,78,0	1/1:0,24:24:72.16:764,72,0	1/1:2,32:34:87.22:935,87,0	1/1:0,2:2:6.02:64,6,0
chr10	21007901	.	ACT	A	3741.94	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=9.976;DP=783;FS=5.866;HRun=0;HaplotypeScore=105.3986;InbreedingCoeff=0.9995;MQ=84.49;MQ0=0;MQRankSum=-1.285;QD=38.18;ReadPosRankSum=-0.098;VQSLOD=5.3071;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,141,2538	1/1:1,13:14:32.72:440,33,0	0/0:26,0:26:75.07:0,75,1220	0/0:29,0:29:70.65:0,71,1183	1/1:0,19:19:57.16:776,57,0	0/0:21,0:21:60.19:0,60,1050	0/0:44,0:44:99:0,129,2264	0/0:26,0:26:72.23:0,72,1232	0/0:38,0:38:99:0,111,1988	1/1:0,22:22:63.20:867,63,0	1/1:1,18:19:54.18:755,54,0	0/0:36,0:36:93.30:0,93,1629	0/0:27,0:27:75.26:0,75,1340	0/0:28,0:28:81.28:0,81,1438	0/0:23,0:23:66.23:0,66,1180	0/0:34,0:34:99:0,102,1785	0/0:35,0:35:99:0,99,1782	0/0:35,0:35:99:0,102,1806	1/1:2,22:24:66.21:905,66,0	0/0:27,0:27:78.24:0,78,1334	0/0:38,0:38:99:0,102,1836	0/0:26,0:26:72.25:0,72,1289	0/0:24,0:24:72.25:0,72,1285	0/0:32,0:31:84.27:0,84,1456	0/0:21,0:21:57.18:0,57,995	0/0:29,0:29:42.28:0,42,1390	0/0:27,0:27:72.23:0,72,1259	0/0:8,0:8:24.08:0,24,431
chr10	21008854	.	AT	A	5142.40	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=5.310;DP=521;FS=12.122;HRun=9;HaplotypeScore=90.6167;InbreedingCoeff=0.9507;MQ=76.80;MQ0=2;MQRankSum=-2.443;QD=13.19;ReadPosRankSum=5.693;VQSLOD=3.2422;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,19:27:38.98:355,39,0	0/0:6,0:6:14.92:0,15,117	0/0:22,0:18:29.08:0,29,276	0/0:20,0:14:19.81:0,20,128	0/0:19,0:19:47.83:0,48,378	1/1:4,13:17:33.01:300,33,0	1/1:10,4:15:20.49:143,20,0	1/1:10,7:18:32.85:252,33,0	1/1:1,0:19:34.63:102,35,0	0/0:16,0:16:13.71:0,14,289	0/0:16,0:16:38.97:0,39,338	1/1:4,9:13:27.48:247,27,0	1/1:9,9:18:30.46:271,30,0	1/1:1,14:15:33.02:301,33,0	0/0:17,0:17:42.09:0,42,459	1/1:23,0:23:52.24:288,52,0	1/1:24,0:24:52.24:288,52,0	1/1:25,0:25:57.93:321,58,0	0/0:15,0:15:26.03:0,26,232	1/1:7,6:15:18.58:118,19,0	1/1:11,17:29:44.51:390,45,0	1/1:3,10:13:14.87:125,15,0	1/1:6,3:9:16.83:108,17,0	1/1:7,10:18:29.02:252,29,0	1/1:12,15:27:35.99:328,36,0	1/1:2,10:12:1.67:146,2,0	1/1:3,23:26:51.02:465,51,0	1/1:11,16:27:38.90:344,39,0
chr10	21008862	.	TTG	T	2458.95	PASS	AB=1.000;AC=12;AF=0.214;AN=56;BaseQRankSum=-3.850;DP=461;FS=20.327;HRun=0;HaplotypeScore=101.3370;InbreedingCoeff=0.5804;MQ=72.11;MQ0=3;MQRankSum=-1.294;QD=19.52;ReadPosRankSum=4.254;VQSLOD=2.3813;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:35.05:0,35,126	0/0:5,0:5:15.03:0,15,162	0/0:21,0:15:35.10:0,35,462	0/0:18,0:13:22.24:0,22,205	0/0:20,0:20:53.91:0,54,545	0/0:15,0:15:30.37:0,30,115	0/1:7,0:7:9.49:16,0,9	0/0:16,0:16:7:0,7,119	1/1:18,0:18:43.61:172,44,0	0/0:17,0:17:25.71:0,26,471	0/0:16,0:16:42.05:0,42,429	0/0:10,0:10:22.78:0,23,81	0/0:13,0:13:28.80:0,29,123	0/0:15,0:15:27.24:0,27,99	0/0:15,0:15:45.11:0,45,726	1/1:0,19:19:54.18:781,54,0	1/1:0,23:23:54.18:781,54,0	1/1:1,22:23:63.04:833,63,0	0/0:11,0:11:31.23:0,31,375	0/1:14,0:14:6.99:7,0,108	0/0:23,0:23:38.45:0,38,198	0/0:16,0:16:8.74:0,9,95	0/1:7,0:7:15.89:16,0,16	0/0:15,0:15:18.55:0,19,92	0/0:19,0:19:35.20:0,35,143	0/1:15,0:15:25.99:26,0,106	0/0:27,0:27:49.34:0,49,206	0/0:18,0:18:22.66:0,23,128
chr10	21008863	.	T	TG	4009.87	PASS	AB=0.802;AC=41;AF=0.732;AN=56;BaseQRankSum=-7.384;DP=476;FS=9.430;HRun=9;HaplotypeScore=94.7290;InbreedingCoeff=0.6609;MQ=71.55;MQ0=3;MQRankSum=2.396;QD=11.26;ReadPosRankSum=-3.398;VQSLOD=1.6565;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:24:40.47:239,40,0	1/1:3,4:7:9.02:97,9,0	0/0:21,0:15:11.82:0,12,102	0/1:18,0:13:21.88:22,0,35	1/1:7,14:21:36.02:369,36,0	1/1:15,0:15:37.63:234,38,0	1/1:7,0:7:11.76:73,12,0	1/1:17,0:17:13.82:159,14,0	0/0:19,0:19:48.93:0,49,263	0/1:8,10:18:15.59:217,0,16	1/1:10,7:17:14.97:150,15,0	1/1:11,0:11:29.10:180,29,0	1/1:13,0:13:37.70:237,38,0	1/1:16,0:16:24.95:176,25,0	0/0:15,0:15:35.96:0,36,305	0/0:19,0:19:39.78:0,40,123	0/0:23,0:23:39.96:0,40,125	0/0:23,0:23:42.57:0,43,137	0/1:10,3:13:69.06:97,0,69	1/1:15,0:15:1.24:165,1,0	1/1:24,0:24:21.03:252,21,0	1/1:16,0:16:18.51:154,19,0	1/1:8,0:8:11.57:65,12,0	1/1:15,0:15:19.25:189,19,0	1/1:20,0:20:43.63:278,44,0	1/1:15,0:15:19.79:132,20,0	1/1:27,0:27:17.36:285,17,0	1/1:18,0:18:40.69:243,41,0
chr10	21009002	.	AT	A	4059.49	PASS	AB=0.776;AC=34;AF=0.607;AN=56;BaseQRankSum=-1.401;DP=510;FS=0.835;HRun=13;HaplotypeScore=69.7138;InbreedingCoeff=0.7619;MQ=71.38;MQ0=4;MQRankSum=-1.014;QD=12.81;ReadPosRankSum=0.165;VQSLOD=3.7798;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,21:27:30.51:372,31,0	0/1:6,1:7:6.88:7,0,102	0/0:34,1:23:10.69:0,11,150	0/1:20,0:13:1.92:2,0,23	0/0:17,1:19:22.98:0,23,365	1/1:5,16:22:14.61:261,15,0	1/1:3,15:18:35.31:262,35,0	1/1:6,0:23:32.66:93,33,0	1/1:3,10:13:23.84:175,24,0	0/0:19,0:19:39.06:0,39,380	0/0:17,1:18:26.13:0,26,406	1/1:1,7:8:20.85:153,21,0	1/1:5,14:19:41.65:302,42,0	1/1:4,17:21:50.67:372,51,0	0/0:16,0:16:38.91:0,39,355	0/0:5,0:21:42.61:0,43,213	0/0:7,0:26:49.09:0,49,272	0/0:4,0:28:57.15:0,57,306	0/0:8,0:9:23.87:0,24,219	1/1:3,15:18:41.72:306,42,0	0/1:3,5:8:11.27:91,0,11	1/1:4,9:13:23.83:175,24,0	1/1:4,14:19:43.76:312,44,0	1/1:2,15:17:41.75:306,42,0	0/1:6,9:16:3.13:133,0,3	1/1:6,14:20:41.71:305,42,0	1/1:4,13:17:35.71:256,36,0	1/1:2,9:11:23.86:175,24,0
chr10	21010006	.	CT	C	7014.27	PASS	AB=1.000;AC=35;AF=0.625;AN=56;BaseQRankSum=13.260;DP=548;FS=2.470;HRun=9;HaplotypeScore=58.5023;InbreedingCoeff=0.9224;MQ=70.45;MQ0=1;MQRankSum=-0.645;QD=20.81;ReadPosRankSum=2.323;VQSLOD=5.6946;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,25:30:68.98:623,69,0	0/0:13,1:14:11.87:0,12,388	0/0:9,0:7:15.03:0,15,161	0/1:17,0:13:8.37:8,0,38	0/0:29,0:29:78.23:0,78,900	1/1:1,20:21:54.02:494,54,0	1/1:1,14:15:30.02:275,30,0	1/1:2,22:24:62.94:561,63,0	1/1:1,13:14:36.02:330,36,0	0/0:22,0:22:60.16:0,60,677	0/0:20,0:20:57.17:0,57,658	1/1:2,21:23:54.03:494,54,0	1/1:1,18:19:54.03:494,54,0	1/1:3,18:21:51.03:466,51,0	0/0:25,0:25:65.93:0,66,739	0/0:17,0:17:45.11:0,45,500	0/0:34,0:33:93.28:0,93,1072	0/0:21,0:21:57.17:0,57,657	0/0:20,0:20:57.16:0,57,649	1/1:2,13:15:38.98:349,39,0	1/1:2,13:15:33.02:302,33,0	1/1:1,6:7:18.01:165,18,0	1/1:2,13:15:36.01:327,36,0	1/1:2,8:10:15:137,15,0	1/1:1,22:23:51.03:467,51,0	1/1:2,33:35:67.42:863,67,0	1/1:5,18:23:51.01:466,51,0	1/1:3,7:10:21.01:192,21,0
chr10	21010570	.	T	TC	2959.15	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.870;DP=714;FS=5.490;HRun=6;HaplotypeScore=76.6614;InbreedingCoeff=0.9869;MQ=71.71;MQ0=0;MQRankSum=-0.266;QD=31.48;ReadPosRankSum=4.426;VQSLOD=3.9878;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,114,1153	0/0:7,0:7:21.05:0,21,213	0/0:12,0:12:22.49:0,22,203	0/0:15,0:13:12.53:0,13,91	0/0:31,0:31:78.17:0,78,795	0/0:25,0:25:72.16:0,72,734	0/0:35,0:35:93.16:0,93,932	0/0:25,0:25:41.81:0,42,404	0/0:21,0:21:54.12:0,54,551	0/0:35,0:35:93.20:0,93,948	0/0:15,0:15:39.08:0,39,397	0/0:24,0:24:63.14:0,63,642	0/0:23,0:23:66.14:0,66,667	0/0:21,0:21:51.10:0,51,514	0/0:23,0:23:57.09:0,57,572	1/1:2,28:30:53.65:988,54,0	1/1:3,32:35:90.29:1132,90,0	1/1:0,29:29:78.25:981,78,0	0/0:26,0:26:63.13:0,63,642	0/0:21,0:21:57.12:0,57,581	0/0:52,0:52:99:0,146,1458	0/0:15,0:15:36.08:0,36,366	0/0:17,0:17:45.10:0,45,459	0/0:34,0:34:93.20:0,93,948	0/0:22,0:22:66.11:0,66,661	0/0:34,0:34:81.16:0,81,821	0/0:33,0:32:96.20:0,96,973	0/0:9,0:9:24.05:0,24,245
chr10	21011437	.	AACACACACACACAC	A	4236.88	PASS	AC=32;AF=0.667;AN=48;BaseQRankSum=1.834;DP=270;FS=11.103;HRun=0;HaplotypeScore=106.8828;InbreedingCoeff=0.6732;MQ=52.70;MQ0=8;MQRankSum=-2.301;QD=22.18;ReadPosRankSum=-0.035;VQSLOD=2.8784;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:14,9:22:8.99:243,9,0	0/0:4,0:7:9:0,9,108	0/0:6,0:4:3.01:0,3,108	0/0:9,0:4:3.01:0,3,113	0/0:8,0:12:23.63:0,24,261	1/1:3,3:6:9.03:296,9,0	1/1:4,5:9:11.97:338,12,0	1/1:12,0:18:12.18:73,12,0	1/1:5,8:13:9.03:353,9,0	0/0:9,0:9:6.02:0,6,116	0/0:8,0:8:9.01:0,9,170	1/1:5,5:10:12.04:413,12,0	1/1:1,9:10:8.84:353,9,0	1/1:7,2:8:3.01:118,3,0	0/0:7,0:9:18.06:0,18,848	./.	./.	./.	0/0:10,0:13:16.80:0,17,199	1/1:4,2:6:3.01:52,3,0	1/1:11,0:10:5.99:51,6,0	./.	1/1:5,3:9:11.23:265,11,0	1/1:5,4:10:6:141,6,0	1/1:7,4:10:3.01:117,3,0	1/1:8,4:10:12:192,12,0	1/1:13,13:26:29.77:1115,30,0	1/1:6,2:6:3.01:118,3,0
chr10	21011754	.	CAAG	C	1506.52	PASS	AB=0.548;AC=5;AF=0.089;AN=56;BaseQRankSum=9.741;DP=564;FS=7.745;HRun=0;HaplotypeScore=114.1180;InbreedingCoeff=0.7628;MQ=70.43;MQ0=6;MQRankSum=-8.912;QD=31.39;ReadPosRankSum=2.133;VQSLOD=3.5313;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,99,2253	0/0:10,0:10:27.09:0,27,637	0/0:25,0:21:51.61:0,52,976	0/0:29,0:25:62.02:0,62,1266	0/0:16,0:15:30.10:0,30,679	0/0:17,0:17:45.15:0,45,1001	0/0:34,0:33:96.30:0,96,2058	0/0:15,0:14:39.59:0,40,856	0/0:18,0:18:51.18:0,51,1206	0/0:14,0:14:39.13:0,39,911	0/0:12,0:11:24.08:0,24,563	0/0:33,0:33:93.32:0,93,2092	0/0:40,0:40:99:0,120,2803	0/0:35,0:35:93.28:0,93,2103	0/0:24,0:23:69.24:0,69,1557	0/1:4,19:22:16.78:806,0,17	1/1:1,10:11:27.09:471,27,0	1/1:4,10:14:26.88:358,27,0	0/0:17,0:16:45.15:0,45,983	0/0:5,0:5:12.51:0,13,277	0/0:37,0:37:99:0,100,2232	0/0:11,0:10:27.08:0,27,593	0/0:9,0:9:15.05:0,15,348	0/0:26,0:25:78.27:0,78,1834	0/0:22,0:22:66.22:0,66,1497	0/0:15,0:15:39.13:0,39,916	0/0:13,0:13:30.10:0,30,701	0/0:5,0:5:15.05:0,15,354
chr10	21011761	.	CAG	C	1029.85	PASS	AB=0.600;AC=4;AF=0.071;AN=56;BaseQRankSum=9.406;DP=556;FS=12.157;HRun=0;HaplotypeScore=106.9304;InbreedingCoeff=0.4155;MQ=66.60;MQ0=16;MQRankSum=-9.953;QD=19.80;ReadPosRankSum=0.243;VQSLOD=3.0858;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:87.30:0,87,1513	0/0:11,0:11:26.41:0,26,468	0/0:20,0:17:35.46:0,35,502	0/0:26,0:22:54.18:0,54,903	0/0:15,0:14:15.05:0,15,263	0/0:16,0:16:45.15:0,45,784	0/0:35,0:33:84.03:0,84,1411	0/0:13,0:12:30.09:0,30,515	0/0:22,0:21:20.29:0,20,892	0/0:14,0:14:36.06:0,36,594	0/0:8,0:7:21.07:0,21,368	0/0:29,1:29:60.03:0,60,1187	0/0:41,0:41:66.42:0,66,1797	0/0:39,0:39:58.03:0,58,1428	0/0:24,0:22:66.23:0,66,1155	0/1:7,17:22:30.90:608,0,31	0/1:6,10:15:93.16:298,0,93	1/1:5,7:11:21.77:239,22,0	0/0:15,0:12:27.02:0,27,430	0/0:6,0:6:6.01:0,6,105	0/0:38,1:38:81.81:0,82,1514	0/0:10,0:9:24.05:0,24,388	0/0:8,0:7:15.05:0,15,263	0/0:30,0:29:69.17:0,69,1210	0/0:21,0:21:57.20:0,57,989	0/0:13,0:13:33.11:0,33,579	0/0:10,1:11:23.57:0,24,418	0/0:6,0:5:15.05:0,15,263
chr10	21011763	.	G	GAGGC	1208.23	PASS	AB=0.949;AC=7;AF=0.125;AN=56;BaseQRankSum=8.613;DP=554;FS=17.385;HRun=0;HaplotypeScore=133.9761;InbreedingCoeff=0.1722;MQ=66.00;MQ0=23;MQRankSum=-10.449;QD=7.70;ReadPosRankSum=-0.553;VQSLOD=1.8791;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:87.30:0,87,1513	0/0:12,0:11:26.82:0,27,469	0/0:19,0:16:36.05:0,36,517	0/0:25,0:22:54.18:0,54,917	0/0:14,0:13:15.05:0,15,263	0/0:18,0:17:44.97:0,45,784	0/0:35,0:32:85.21:0,85,1430	0/0:14,0:13:29.27:0,29,514	0/1:20,2:21:24.53:25,0,885	0/0:12,0:12:36.12:0,36,615	0/0:8,0:7:21.07:0,21,368	0/0:31,0:30:48.23:0,48,1173	0/1:37,2:39:52.41:52,0,1710	0/1:36,4:40:99:110,0,1374	0/0:24,0:22:66.23:0,66,1154	0/1:24,0:22:14.31:610,0,14	0/1:18,0:17:99:296,0,122	1/1:13,0:11:22.56:251,23,0	0/0:15,0:12:30.10:0,30,496	0/0:6,0:6:6.02:0,6,105	0/0:38,0:37:88.39:0,88,1524	0/0:11,0:10:23.98:0,24,387	0/0:8,0:7:15.05:0,15,263	0/0:30,0:28:68.57:0,69,1208	0/0:19,0:19:57.20:0,57,989	0/0:11,0:11:33.11:0,33,579	0/0:11,0:11:22.06:0,22,416	0/0:6,0:5:15.05:0,15,263
chr10	21011785	.	G	GA	376.57	PASS	AB=0.697;AC=3;AF=0.054;AN=56;BaseQRankSum=8.132;DP=518;FS=10.454;HRun=1;HaplotypeScore=84.4758;InbreedingCoeff=-0.0786;MQ=47.26;MQ0=72;MQRankSum=-7.331;QD=6.49;ReadPosRankSum=2.502;VQSLOD=-0.1026;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:26:72.06:0,72,900	0/0:8,0:7:16.87:0,17,215	0/0:5,0:2:2.76:0,3,41	0/0:12,0:9:17.97:0,18,221	0/0:11,0:10:15.02:0,15,174	0/0:17,0:16:44.99:0,45,567	0/0:50,0:28:58.95:0,59,761	0/0:13,0:8:21.96:0,22,296	0/0:28,0:21:57.16:0,57,756	0/0:9,0:8:24.07:0,24,321	0/0:6,0:5:9.03:0,9,126	0/0:31,0:28:75.50:0,76,1002	0/0:38,0:36:99:0,102,1386	0/0:40,0:36:85.32:0,85,1122	0/0:23,0:21:57.15:0,57,772	0/1:12,15:22:94.50:268,0,94	0/1:12,8:17:99:134,0,150	0/1:7,4:8:74.44:74,0,106	0/0:10,0:5:12.04:0,12,167	0/0:6,0:4:6.02:0,6,84	0/0:39,0:33:66.04:0,66,847	0/0:8,0:7:18.06:0,18,251	0/0:7,0:6:6.02:0,6,84	0/0:35,0:32:79.62:0,80,1091	0/0:12,0:12:33.10:0,33,445	0/0:10,0:10:30.07:0,30,372	0/0:8,0:7:18.05:0,18,234	0/0:6,0:4:12.04:0,12,168
chr10	21011786	.	GCA	G	391.45	PASS	AB=0.700;AC=3;AF=0.054;AN=56;BaseQRankSum=8.263;DP=513;FS=6.813;HRun=0;HaplotypeScore=89.5238;InbreedingCoeff=-0.0809;MQ=46.95;MQ0=74;MQRankSum=-6.704;QD=6.63;ReadPosRankSum=1.396;VQSLOD=2.6709;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:24:65.31:0,65,1047	0/0:8,0:7:15.94:0,16,275	0/0:5,0:2:3.01:0,3,51	0/0:12,0:9:10.56:0,11,149	0/0:11,0:10:12.51:0,13,220	0/0:16,0:15:37.37:0,37,657	0/0:49,0:26:53.20:0,53,930	0/0:13,0:8:21.96:0,22,361	0/0:27,0:20:51.13:0,51,917	0/0:9,0:8:21.07:0,21,383	0/0:6,0:5:9.03:0,9,164	0/0:32,0:29:73.04:0,73,1237	0/0:36,0:34:95.49:0,95,1658	0/0:40,0:36:86:0,86,1447	0/0:23,0:21:54.18:0,54,1002	0/1:12,15:22:99:289,0,175	0/1:13,8:18:99:135,0,249	0/1:7,4:8:66.88:67,0,119	0/0:10,0:5:12.01:0,12,158	0/0:6,0:4:5.48:0,5,35	0/0:38,0:32:60.76:0,61,1007	0/0:8,0:7:18.03:0,18,319	0/0:7,0:6:5.95:0,6,69	0/0:36,0:33:82.63:0,83,1500	0/0:12,0:12:30.08:0,30,508	0/0:9,0:9:21.06:0,21,354	0/0:8,0:7:18.03:0,18,260	0/0:6,0:4:12.04:0,12,231
chr10	21011841	.	CAGA	C	1181.16	PASS	AB=0.718;AC=4;AF=0.071;AN=56;BaseQRankSum=7.451;DP=601;FS=61.165;HRun=0;HaplotypeScore=74.7965;InbreedingCoeff=0.4175;MQ=47.04;MQ0=141;MQRankSum=-1.437;QD=18.46;ReadPosRankSum=3.692;VQSLOD=0.7695;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:16:45.15:0,45,689	0/0:3,0:1:3.01:0,3,46	0/0:27,0:12:33.58:0,34,512	0/0:31,0:16:45.15:0,45,689	0/0:6,0:5:12.04:0,12,183	0/0:17,0:11:27.56:0,28,416	0/0:50,0:28:75.73:0,76,1151	0/0:16,0:9:27.07:0,27,391	0/0:25,0:19:54.18:0,54,854	0/0:9,0:6:18.06:0,18,276	0/0:5,0:5:12.04:0,12,184	0/0:34,0:31:81.68:0,82,1272	0/0:31,0:28:81.75:0,82,1318	0/0:43,0:39:99:0,100,1640	0/0:26,0:24:69.23:0,69,1071	0/1:5,24:14:63.37:570,0,63	1/1:2,17:15:36.11:666,36,0	0/1:14,2:11:8.02:60,0,8	0/0:16,0:11:30.10:0,30,458	0/0:8,0:6:18.06:0,18,274	0/0:58,0:38:99:0,100,1496	0/0:9,0:6:7.74:0,8,96	0/0:10,0:7:18.53:0,19,277	0/0:40,0:38:99:0,101,1556	0/0:8,0:5:12.04:0,12,184	0/0:10,0:6:18.06:0,18,276	0/0:15,0:13:39.60:0,40,595	0/0:16,0:15:45.15:0,45,745
chr10	21011844	.	A	AGGC	1185.53	PASS	AB=0.966;AC=5;AF=0.089;AN=56;BaseQRankSum=7.095;DP=579;FS=62.677;HRun=0;HaplotypeScore=80.7409;InbreedingCoeff=0.6213;MQ=54.54;MQ0=107;MQRankSum=-1.764;QD=18.24;ReadPosRankSum=3.034;VQSLOD=1.0031;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:15:42.14:0,42,697	0/0:1,0:1:3.01:0,3,50	0/0:30,0:15:42.11:0,42,643	0/0:35,0:20:25.15:0,25,739	0/0:7,0:6:12.04:0,12,197	0/0:15,0:11:27.09:0,27,449	0/0:43,0:29:78.25:0,78,1271	0/0:18,0:12:33.57:0,34,486	0/0:23,0:19:57.18:0,57,902	0/0:9,0:6:18.06:0,18,299	0/0:5,0:5:12.04:0,12,200	0/0:33,0:32:84.08:0,84,1298	0/0:29,0:29:78.47:0,78,1230	0/0:37,0:36:96.16:0,96,1554	0/0:26,0:25:66.23:0,66,1089	0/1:27,1:14:30.78:570,0,31	1/1:20,0:16:34.36:613,34,0	1/1:7,9:13:5.04:122,5,0	0/0:18,0:14:39.09:0,39,571	0/0:7,0:6:18.06:0,18,296	0/0:54,0:39:99:0,102,1640	0/0:10,0:8:15.50:0,16,200	0/0:10,0:8:21.06:0,21,324	0/0:39,0:38:99:0,99,1590	0/0:6,0:5:12.04:0,12,200	0/0:8,0:6:18.06:0,18,299	0/0:15,0:13:37.37:0,37,601	0/0:15,0:15:45.15:0,45,748
chr10	21012631	.	ACGCT	A	22659.92	PASS	AB=0.531;AC=33;AF=0.589;AN=56;BaseQRankSum=12.483;DP=725;FS=1.600;HRun=0;HaplotypeScore=143.7854;InbreedingCoeff=0.9347;MQ=90.93;MQ0=1;MQRankSum=-7.974;QD=50.58;ReadPosRankSum=4.212;VQSLOD=6.0117;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,56:57:99:2636,133,0	0/0:16,0:16:48.16:0,48,1342	0/0:32,0:32:87.13:0,87,2294	0/0:32,0:31:90.27:0,90,2355	0/0:15,0:15:45.15:0,45,1228	1/1:0,21:21:63.22:1258,63,0	1/1:1,24:25:63.22:1258,63,0	1/1:0,20:20:57.18:1092,57,0	1/1:0,32:32:84.29:1677,84,0	0/0:19,0:19:57.20:0,57,1595	0/0:13,0:13:39.13:0,39,1090	1/1:0,22:22:60.21:1175,60,0	1/1:1,27:28:71.99:1437,72,0	1/1:0,30:30:87.30:1737,87,0	0/0:43,0:43:99:0,129,3541	0/0:24,0:24:69.24:0,69,1930	0/0:38,0:38:99:0,114,3143	0/0:30,0:30:90.29:0,90,2457	0/0:15,0:15:45.15:0,45,1258	1/1:0,14:14:27.09:539,27,0	1/1:1,33:33:63.63:1259,64,0	1/1:1,25:26:60.21:1198,60,0	1/1:0,16:16:39.13:779,39,0	1/1:0,30:30:78.74:1558,79,0	1/1:0,19:19:48.16:958,48,0	0/1:3,23:26:8.69:1345,0,9	1/1:1,37:38:99:2154,108,0	1/1:0,10:10:30.10:599,30,0
chr10	21013896	.	GC	G	2928	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=6.568;DP=788;FS=3.214;HRun=2;HaplotypeScore=98.5040;InbreedingCoeff=1.0000;MQ=78.81;MQ0=0;MQRankSum=-0.974;QD=32.18;ReadPosRankSum=2.858;VQSLOD=3.5665;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,150,2225	0/0:14,0:14:42.14:0,42,629	0/0:19,0:19:54.17:0,54,773	0/0:16,0:16:42.14:0,42,619	0/0:24,0:23:69.23:0,69,1034	0/0:20,0:20:57.19:0,57,854	0/0:23,0:23:69.22:0,69,1013	0/0:45,0:45:99:0,135,1988	0/0:34,0:34:99:0,102,1500	0/0:27,0:27:81.27:0,81,1197	0/0:20,0:20:60.20:0,60,885	0/0:26,0:26:78.26:0,78,1166	0/0:35,0:35:99:0,99,1441	0/0:23,0:23:69.22:0,69,1014	0/0:40,0:40:99:0,117,1706	1/1:2,41:43:78.43:1513,78,0	1/1:0,26:26:66.21:857,66,0	1/1:0,22:22:54.18:701,54,0	0/0:23,0:23:63.20:0,63,926	0/0:27,0:27:81.27:0,81,1213	0/0:49,0:49:99:0,147,2163	0/0:24,0:24:72.23:0,72,1058	0/0:23,0:23:63.21:0,63,940	0/0:38,0:38:99:0,114,1676	0/0:21,0:21:60.20:0,60,899	0/0:27,0:27:78.26:0,78,1169	0/0:34,0:34:96.32:0,96,1428	0/0:13,0:13:39.12:0,39,564
chr10	21014356	.	TG	T	2672.80	PASS	AB=0.824;AC=50;AF=0.893;AN=56;BaseQRankSum=-0.676;DP=480;FS=1.919;HRun=12;HaplotypeScore=77.1758;InbreedingCoeff=0.4404;MQ=80.58;MQ0=1;MQRankSum=-2.938;QD=6.03;ReadPosRankSum=3.966;VQSLOD=2.3501;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:10,11:22:13.96:99,14,0	1/1:0,0:13:22.41:66,22,0	0/1:30,0:18:8.88:9,0,135	0/0:20,0:18:0.35:0,0,70	1/1:6,0:19:22.40:66,22,0	1/1:10,13:23:28.89:215,29,0	0/1:5,5:11:8.65:105,0,9	1/1:9,6:16:13.96:99,14,0	1/1:6,6:12:14.93:115,15,0	1/1:5,0:19:26.46:78,26,0	1/1:9,0:16:14.72:42,15,0	1/1:9,11:22:29.48:202,29,0	1/1:2,6:8:11.95:93,12,0	1/1:2,8:10:11.92:93,12,0	0/0:16,0:16:20.95:0,21,185	1/1:3,0:20:30.55:90,31,0	1/1:2,0:25:50.93:149,51,0	1/1:5,0:19:30.55:90,31,0	1/1:4,0:23:34.87:101,35,0	1/1:5,7:12:5.63:45,6,0	1/1:7,9:16:23.37:171,23,0	1/1:6,6:12:8.94:70,9,0	1/1:9,4:14:10.97:75,11,0	1/1:4,11:15:23.69:186,24,0	1/1:15,4:23:30.57:191,31,0	1/1:11,0:11:5.01:29,5,0	1/1:4,11:18:23.98:157,24,0	1/1:4,8:13:22.93:168,23,0
chr10	21014481	.	A	AT	3573.98	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=4.260;DP=629;FS=2.600;HRun=1;HaplotypeScore=64.4045;InbreedingCoeff=0.9997;MQ=86.73;MQ0=0;MQRankSum=-2.909;QD=40.61;ReadPosRankSum=1.057;VQSLOD=4.3289;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,132,1697	0/0:10,0:10:30.10:0,30,390	0/0:26,0:26:75.19:0,75,917	0/0:18,0:18:54.17:0,54,680	0/0:21,0:21:60.19:0,60,779	0/0:21,0:21:63.19:0,63,803	0/0:27,0:27:81.26:0,81,1052	0/0:20,0:20:60.20:0,60,779	0/0:15,0:15:45.15:0,45,584	0/0:35,0:35:99:0,105,1362	0/0:17,0:17:51.17:0,51,662	0/0:19,0:19:57.18:0,57,734	0/0:16,0:16:48.16:0,48,622	0/0:11,0:11:33.09:0,33,414	0/0:17,0:17:51.15:0,51,648	1/1:2,23:25:66.22:989,66,0	1/1:1,32:33:87.27:1281,87,0	1/1:0,30:30:87.29:1304,87,0	0/0:22,0:22:60.18:0,60,764	0/0:20,0:20:60.20:0,60,779	0/0:37,0:37:99:0,111,1425	0/0:17,0:17:48.15:0,48,610	0/0:19,0:19:57.19:0,57,740	0/0:14,0:13:36.12:0,36,467	0/0:26,0:26:78.22:0,78,983	0/0:23,0:23:69.22:0,69,882	0/0:19,0:19:54.18:0,54,700	0/0:24,0:24:72.22:0,72,921
chr10	21016611	.	AT	A	1847.03	PASS	AB=0.864;AC=11;AF=0.196;AN=56;BaseQRankSum=5.373;DP=610;FS=0.000;HRun=10;HaplotypeScore=93.1227;InbreedingCoeff=0.8803;MQ=76.55;MQ0=1;MQRankSum=3.789;QD=15.79;ReadPosRankSum=-0.389;VQSLOD=3.6760;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,105,1158	1/1:4,12:16:28.13:237,28,0	0/0:20,0:19:13.88:0,14,159	0/1:16,3:16:75.04:75,0,110	1/1:2,25:27:68.98:598,69,0	0/0:19,0:20:53.97:0,54,570	0/0:15,0:16:38.94:0,39,412	0/0:32,0:32:65.01:0,65,636	0/0:22,0:22:63.15:0,63,681	1/1:3,18:21:53.99:469,54,0	1/1:1,17:18:44.98:390,45,0	0/0:20,2:22:37.12:0,37,637	0/0:29,0:29:81.22:0,81,896	0/0:20,0:20:48.02:0,48,494	0/0:23,0:23:63.16:0,63,689	0/0:27,1:28:46.11:0,46,720	0/0:24,0:24:69.17:0,69,748	0/0:23,0:23:55.42:0,55,600	1/1:6,10:16:29.97:257,30,0	0/0:22,0:22:56.18:0,56,603	0/0:16,0:16:39.09:0,39,419	0/0:21,0:21:57.14:0,57,621	0/0:19,0:19:50.17:0,50,535	0/0:23,0:23:63.17:0,63,697	0/0:15,1:17:18.89:0,19,411	0/0:29,0:29:78.21:0,78,860	0/0:16,1:17:22.06:0,22,459	0/0:13,0:13:33.06:0,33,348
chr10	21019117	.	A	AC	944.14	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-6.353;DP=687;FS=0.711;HRun=5;HaplotypeScore=80.9830;InbreedingCoeff=0.9914;MQ=88.94;MQ0=0;MQRankSum=-1.626;QD=30.46;ReadPosRankSum=-4.781;VQSLOD=1.7164;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:96.24:0,96,1031	0/0:7,0:7:18.01:0,18,182	0/0:25,0:25:48.10:0,48,575	0/0:32,0:32:74:0,74,740	0/0:23,0:23:54.13:0,54,580	0/0:23,0:23:63.16:0,63,677	0/0:22,0:22:66.11:0,66,688	1/1:1,30:31:84.20:1039,84,0	0/0:22,0:22:60.15:0,60,645	0/0:27,0:27:72.18:0,72,773	0/0:14,0:14:33.07:0,33,346	0/0:25,0:25:69.14:0,69,730	0/0:24,0:24:60.13:0,60,636	0/0:30,0:30:84.68:0,85,903	0/0:31,0:31:87.22:0,87,934	0/0:23,0:23:66.17:0,66,709	0/0:36,0:36:96.24:0,96,1031	0/0:29,0:29:78.19:0,78,838	0/0:27,0:27:69.17:0,69,741	0/0:15,0:15:36.07:0,36,376	0/0:43,0:43:99:0,117,1240	0/0:13,0:13:39.10:0,39,419	0/0:13,0:13:36.09:0,36,384	0/0:32,0:32:81.20:0,81,871	0/0:26,0:26:72.18:0,72,772	0/0:24,0:24:60.12:0,60,630	0/0:18,0:18:48.10:0,48,506	0/0:17,0:17:51.13:0,51,548
chr10	21021967	.	TAAA	T	8633.66	PASS	AB=1.000;AC=39;AF=0.696;AN=56;BaseQRankSum=8.617;DP=623;FS=3.936;HRun=15;HaplotypeScore=127.3429;InbreedingCoeff=0.8932;MQ=58.00;MQ0=2;MQRankSum=-2.195;QD=19.94;ReadPosRankSum=5.991;VQSLOD=3.5634;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,11:20:11.66:315,12,0	0/0:4,0:11:17.95:0,18,170	0/0:15,0:8:18.03:0,18,219	0/1:7,0:3:8.01:8,0,35	0/0:16,0:31:65.88:0,66,601	1/1:3,11:15:30.01:320,30,0	1/1:6,23:30:52.45:587,52,0	0/0:16,0:32:63.04:0,63,803	1/1:4,13:20:32.90:382,33,0	0/0:13,0:24:44.82:0,45,349	0/0:10,0:26:65.86:0,66,609	1/1:8,20:28:31.45:516,31,0	1/1:9,15:25:43.36:483,43,0	1/1:4,16:20:38.94:421,39,0	0/0:26,0:26:66.05:0,66,1098	1/1:4,20:24:57.15:639,57,0	1/1:4,21:25:51:572,51,0	1/1:5,14:21:52.50:582,53,0	0/0:5,0:19:44.87:0,45,365	1/1:10,23:34:34.07:501,34,0	1/1:3,7:11:23.93:253,24,0	1/1:4,8:13:4.46:200,4,0	1/1:5,19:25:50.49:521,50,0	1/1:4,15:20:34.40:400,34,0	1/1:12,14:27:15.52:359,16,0	1/1:10,22:33:48.99:725,49,0	1/1:4,21:25:60.08:653,60,0	1/1:3,5:9:15.32:197,15,0
chr10	21021980	.	AAAG	A	2533.19	PASS	AB=0.991;AC=20;AF=0.357;AN=56;BaseQRankSum=15.862;DP=625;FS=31.418;HRun=0;HaplotypeScore=141.9808;InbreedingCoeff=-0.3949;MQ=66.33;MQ0=2;MQRankSum=-4.684;QD=6.06;ReadPosRankSum=13.149;VQSLOD=-0.4401;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:18,0:18:60.87:69,0,61	0/0:10,0:10:20.93:0,21,206	0/0:21,0:12:6.84:0,7,232	0/0:8,0:6:14.69:0,15,110	0/0:33,0:33:77.52:0,78,735	0/1:16,0:16:63.50:64,0,65	0/1:27,0:27:12.21:179,0,12	0/0:31,0:30:57.09:0,57,765	0/1:17,0:17:20.48:118,0,20	0/0:21,0:21:52.82:0,53,468	0/0:29,0:29:73.19:0,73,713	0/1:28,1:29:77.61:192,0,78	0/1:25,0:25:79.88:151,0,80	0/1:20,0:20:52.60:128,0,53	0/0:29,0:28:78.17:0,78,1232	0/1:23,0:23:6.22:176,0,6	0/1:27,0:27:51.06:182,0,51	1/1:18,3:21:0.39:222,0,0	0/0:24,0:24:65.26:0,65,602	0/1:28,0:28:99:129,0,116	0/1:13,0:13:53.51:54,0,62	0/1:15,0:15:58.50:58,0,110	0/1:23,0:23:14.05:149,0,14	0/1:21,0:21:37.93:149,0,38	0/1:21,1:22:10.49:170,0,10	0/1:36,2:38:99:172,0,239	0/1:26,1:27:19.37:270,0,19	0/1:8,0:8:5.29:60,0,5
chr10	21025057	.	CG	C	988.50	PASS	AB=0.918;AC=23;AF=0.411;AN=56;BaseQRankSum=-1.176;DP=449;FS=12.512;HRun=11;HaplotypeScore=74.0417;InbreedingCoeff=0.0159;MQ=64.28;MQ0=0;MQRankSum=3.051;QD=3.18;ReadPosRankSum=2.827;VQSLOD=-0.6192;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:14.88:0,15,127	1/1:8,0:8:5.98:49,6,0	0/0:15,0:9:7.22:0,7,74	0/0:7,0:6:3.12:0,3,16	1/1:3,9:13:19.96:149,20,0	0/1:10,1:11:9.62:10,0,95	0/1:19,8:27:99:121,0,252	0/1:16,1:17:6.76:7,0,104	0/0:13,0:13:6.22:0,6,63	1/1:7,11:18:28:236,28,0	1/1:4,8:13:23.01:178,23,0	0/1:17,1:18:9.65:10,0,90	0/0:18,0:18:18.41:0,18,170	0/1:18,2:20:23.75:24,0,139	0/1:15,2:17:20.86:21,0,198	0/0:17,0:17:10.75:0,11,142	0/1:24,3:27:43.77:44,0,182	0/1:32,0:32:7.73:8,0,218	1/1:4,9:13:23.94:196,24,0	0/0:11,0:11:9.02:0,9,96	0/1:9,1:10:12.45:12,0,83	0/0:6,1:7:3.01:0,3,32	0/1:10,0:11:0.84:1,0,27	0/1:16,1:17:1.80:2,0,175	0/1:18,0:18:12.55:13,0,70	0/1:18,3:21:44.10:79,0,44	0/0:15,1:16:5.34:0,5,210	0/0:9,0:10:8.86:0,9,78
chr10	21025107	.	CTTGCGT	C	16349.55	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=8.745;DP=446;FS=5.181;HRun=0;HaplotypeScore=113.2384;InbreedingCoeff=0.9449;MQ=70.35;MQ0=0;MQRankSum=-14.408;QD=50.15;ReadPosRankSum=2.448;VQSLOD=4.8346;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,20:23:45.15:1009,45,0	0/0:5,0:5:15.05:0,15,536	0/0:15,0:15:45.15:0,45,1284	0/0:8,0:8:19.57:0,20,543	0/0:15,0:15:45.14:0,45,1495	1/1:0,8:8:18.06:431,18,0	1/1:5,19:24:54.19:1297,54,0	1/1:0,16:16:45.14:960,45,0	1/1:0,16:16:42.14:994,42,0	0/0:17,0:17:42.14:0,42,1500	0/0:13,0:13:36.12:0,36,1228	1/1:1,13:14:33.11:792,33,0	1/1:1,13:14:36.12:850,36,0	1/1:2,21:23:57.20:1369,57,0	0/0:23,0:23:69.24:0,69,2455	1/1:0,10:10:27.09:649,27,0	1/1:3,14:17:33.11:792,33,0	1/1:4,28:32:78.27:1875,78,0	0/0:24,0:24:66.23:0,66,2245	1/1:1,3:4:6.02:144,6,0	1/1:5,17:22:16.32:359,16,0	1/1:1,8:9:18.06:416,18,0	1/1:0,9:9:9.03:216,9,0	1/1:1,12:13:14.72:345,15,0	1/1:1,24:25:51.18:1210,51,0	1/1:1,24:25:69.24:1658,69,0	1/1:3,14:17:36.12:841,36,0	1/1:0,5:5:6.02:144,6,0
chr10	21025874	.	T	TA	2953.73	PASS	AB=0.917;AC=11;AF=0.196;AN=56;BaseQRankSum=-9.767;DP=592;FS=3.677;HRun=8;HaplotypeScore=57.2742;InbreedingCoeff=0.8551;MQ=73.81;MQ0=0;MQRankSum=-0.649;QD=23.26;ReadPosRankSum=1.225;VQSLOD=4.4584;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:84.01:0,84,757	1/1:1,6:7:18.05:208,18,0	0/0:18,0:17:9.35:0,9,240	0/0:11,0:10:5.07:0,5,76	1/1:4,31:35:96.18:1074,96,0	0/0:19,0:19:51.01:0,51,463	0/0:17,0:17:45.01:0,45,408	0/0:35,0:35:93.02:0,93,842	0/0:13,0:13:30.01:0,30,271	1/1:1,21:22:60.17:683,60,0	1/1:1,17:18:48.14:554,48,0	0/0:20,0:20:59.99:0,60,535	0/0:15,0:15:42.01:0,42,381	0/0:14,0:14:27:0,27,247	0/0:22,0:22:60.02:0,60,546	0/0:29,0:29:78:0,78,701	0/0:29,0:29:75.01:0,75,680	0/0:28,0:28:77.99:0,78,701	1/1:6,17:23:54.12:600,54,0	0/0:30,0:30:47.44:0,47,600	0/0:14,0:14:35.80:0,36,310	0/0:11,0:11:32.99:0,33,293	0/0:23,0:23:60.03:0,60,549	0/0:18,0:18:42.02:0,42,384	0/0:22,0:22:48.01:0,48,439	0/1:20,2:22:12.22:12,0,403	0/0:30,0:30:78.02:0,78,708	0/0:16,0:16:48.03:0,48,439
chr10	21026616	.	A	AT	2020.96	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-2.023;DP=655;FS=1.470;HRun=10;HaplotypeScore=71.6169;InbreedingCoeff=0.9686;MQ=79.19;MQ0=0;MQRankSum=0.037;QD=20.01;ReadPosRankSum=-0.143;VQSLOD=4.4210;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:64.80:0,65,551	1/1:0,6:6:12.03:128,12,0	0/0:18,0:18:28.16:0,28,234	0/0:21,0:21:29.62:0,30,230	1/1:4,28:33:54.21:744,54,0	0/0:24,0:24:56.91:0,57,468	0/0:25,0:25:53.89:0,54,440	0/0:28,1:30:47.85:0,48,577	0/0:27,0:27:68.89:0,69,566	1/1:6,19:27:59.81:591,60,0	1/1:6,16:22:48.12:511,48,0	0/0:34,0:34:80.80:0,81,658	0/0:26,1:27:42.90:0,43,554	0/0:28,0:28:65.86:0,66,535	0/0:27,0:27:59.87:0,60,490	0/0:28,0:28:65.90:0,66,542	0/0:19,0:19:44.94:0,45,369	0/0:17,0:17:44.90:0,45,365	1/1:6,5:13:23.76:220,24,0	0/0:24,0:24:62.91:0,63,514	0/0:16,0:16:47.95:0,48,394	0/0:19,0:19:53.92:0,54,440	0/0:16,1:17:6.23:0,6,262	0/0:28,0:28:71.87:0,72,583	0/0:20,0:20:53.84:0,54,433	0/0:41,1:42:69.86:0,70,777	0/0:22,0:22:62.90:0,63,513	0/0:12,0:12:26.95:0,27,222
chr10	21030418	.	C	CCCTT	4972.88	PASS	AC=8;AF=0.148;AN=54;BaseQRankSum=-9.612;DP=605;FS=2.809;HRun=0;HaplotypeScore=108.1897;InbreedingCoeff=0.9704;MQ=66.41;MQ0=0;MQRankSum=-0.026;QD=51.80;ReadPosRankSum=-1.105;VQSLOD=5.7220;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:78.26:0,78,1320	./.	0/0:30,0:25:35.65:0,36,481	0/0:30,0:23:26.41:0,26,488	1/1:4,18:22:48.12:1127,48,0	0/0:19,0:19:48.14:0,48,766	0/0:31,0:31:75.25:0,75,1265	0/0:24,0:24:54.15:0,54,828	0/0:12,0:12:27.09:0,27,466	1/1:9,25:34:72.22:1730,72,0	1/1:2,14:17:39.09:913,39,0	0/0:19,0:19:48.16:0,48,824	0/0:19,0:19:51.13:0,51,848	0/0:25,0:25:63.20:0,63,1061	0/0:26,0:26:69.21:0,69,1162	0/0:29,0:29:66.19:0,66,1046	0/0:27,0:27:70.45:0,70,1164	0/0:15,0:15:39.13:0,39,673	1/1:5,18:23:51.16:1203,51,0	0/0:18,0:18:51.16:0,51,848	0/0:36,0:36:69.23:0,69,1165	0/0:15,0:15:33.11:0,33,570	0/0:17,0:17:39.12:0,39,646	0/0:28,0:28:43.55:0,44,1147	0/0:15,0:15:45.14:0,45,743	0/0:24,0:24:57.18:0,57,937	0/0:17,0:17:33.11:0,33,570	0/0:2,0:2:6.02:0,6,104
chr10	21033163	.	T	TAC	1504.53	PASS	AB=0.872;AC=23;AF=0.460;AN=50;BaseQRankSum=-2.366;DP=631;FS=6.268;HRun=0;HaplotypeScore=96.4438;InbreedingCoeff=-0.2975;MQ=61.07;MQ0=4;MQRankSum=-0.849;QD=3.24;ReadPosRankSum=-0.479;VQSLOD=1.6702;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:25:23.06:40,0,23	0/0:9,0:12:5.68:0,6,28	./.	./.	0/0:13,0:17:2.84:0,3,14	0/1:23,0:23:26.04:38,0,26	0/1:22,0:22:26.06:38,0,26	0/1:17,0:17:0:0,0,0	0/1:23,0:23:17.34:17,0,37	0/0:17,0:17:2.84:0,3,14	0/0:13,0:19:11.36:0,11,56	0/1:25,1:26:20.05:101,0,20	1/1:23,0:23:3.01:44,3,0	0/1:20,5:26:46.09:158,0,46	0/0:28,0:28:18.04:0,18,192	0/1:24,4:32:49.09:117,0,49	1/1:18,7:26:11.94:176,12,0	0/1:20,9:32:13.93:132,0,14	./.	0/0:16,0:18:5.83:0,6,38	0/1:24,8:36:23.04:79,0,23	0/1:24,0:24:61.50:110,0,61	1/1:22,4:27:5.88:80,6,0	0/1:17,10:29:14.06:202,0,14	0/1:17,5:22:26.05:38,0,26	1/1:22,0:22:6.49:85,6,0	0/1:10,5:17:39.82:117,0,40	0/1:9,3:12:23.04:79,0,23
chr10	21034833	.	C	CCTTCCTTT	5518.69	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=3.621;DP=662;FS=16.267;HRun=0;HaplotypeScore=224.6547;InbreedingCoeff=0.4082;MQ=57.86;MQ0=9;MQRankSum=1.708;QD=12.86;ReadPosRankSum=2.298;VQSLOD=2.6822;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:28:6.10:343,0,6	0/0:12,0:12:16.76:0,17,126	0/0:21,0:10:8.65:0,9,49	0/0:19,0:10:3.29:0,3,146	0/1:21,0:21:41.24:41,0,197	1/1:15,0:14:25.98:205,26,0	0/1:19,0:19:15.29:267,0,15	1/1:21,0:19:12.42:202,12,0	0/1:29,0:26:2.45:327,0,2	0/0:28,0:28:44.23:0,44,478	0/0:23,0:22:20.05:0,20,293	1/1:29,0:25:17.99:157,18,0	1/1:31,0:30:41.07:514,41,0	0/1:25,0:24:16.89:446,0,17	0/0:26,0:26:52.76:0,53,1395	0/0:24,0:24:2.86:0,3,25	0/0:32,0:32:8.96:0,9,69	0/0:15,11:26:0.27:0,0,124	0/0:19,0:17:1.21:0,1,178	1/1:24,0:22:24.56:318,25,0	0/1:24,0:24:12.17:238,0,12	1/1:18,0:17:30.01:283,30,0	1/1:16,0:14:36.02:381,36,0	1/1:29,0:29:15.27:368,15,0	1/1:18,0:17:18.97:289,19,0	1/1:30,0:30:23.50:593,24,0	0/1:34,0:33:7.81:213,0,8	1/1:18,0:18:32.96:332,33,0
chr10	21034841	.	T	TCTTCCTTC	12649.81	PASS	AB=0.841;AC=39;AF=0.696;AN=56;BaseQRankSum=-6.417;DP=630;FS=9.678;HRun=0;HaplotypeScore=189.2807;InbreedingCoeff=0.7054;MQ=53.73;MQ0=10;MQRankSum=2.111;QD=26.80;ReadPosRankSum=-1.485;VQSLOD=3.6272;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:27:21.70:794,0,22	0/1:11,0:13:11.70:12,0,235	1/1:16,0:5:2.74:12,3,0	0/0:13,0:4:5.14:0,5,97	0/0:20,0:21:41.73:0,42,580	1/1:12,0:11:33.09:481,33,0	1/1:21,0:21:42.02:651,42,0	1/1:25,0:22:60.33:706,60,0	1/1:27,0:24:54.15:839,54,0	0/0:26,0:27:68.22:0,68,1059	0/0:22,0:22:56.78:0,57,721	1/1:28,0:24:24.06:368,24,0	1/1:31,0:30:78.07:1166,78,0	1/1:26,0:25:59.48:984,59,0	0/0:24,0:24:59.74:0,60,1112	0/1:2,21:24:0:0,0,0	0/0:6,25:33:3.92:0,4,15	1/1:22,2:21:3.01:42,3,0	0/0:17,0:15:41.65:0,42,534	1/1:23,0:21:47.15:705,47,0	1/1:18,0:18:42.12:654,42,0	1/1:17,0:16:11.74:546,12,0	1/1:14,0:12:36.12:689,36,0	1/1:28,0:28:33.38:826,33,0	1/1:18,0:17:46.88:659,47,0	1/1:29,0:29:29.28:1306,29,0	1/1:35,0:34:39.11:543,39,0	1/1:16,0:16:42.03:668,42,0
chr10	21034844	.	T	TCCTT	10647.18	PASS	AB=1.000;AC=42;AF=0.750;AN=56;BaseQRankSum=-5.445;DP=628;FS=8.053;HRun=0;HaplotypeScore=154.4289;InbreedingCoeff=0.7615;MQ=53.65;MQ0=9;MQRankSum=2.139;QD=21.00;ReadPosRankSum=-0.724;VQSLOD=3.9907;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:27:11.94:577,12,0	0/1:11,0:11:16.09:16,0,92	1/1:16,0:5:2.04:6,2,0	0/0:12,0:4:6.90:0,7,73	0/0:19,0:19:30.54:0,31,299	1/1:12,0:11:33.03:456,33,0	1/1:21,0:21:44.80:409,45,0	1/1:27,0:24:50.87:388,51,0	1/1:28,0:25:53.76:770,54,0	0/0:25,0:25:67.15:0,67,558	0/0:23,0:22:55.25:0,55,374	1/1:27,0:23:24:256,24,0	1/1:31,0:30:78.02:1118,78,0	1/1:26,0:25:60.10:892,60,0	0/0:24,0:24:56.76:0,57,681	0/1:24,0:24:0:0,0,0	1/1:33,0:33:1.55:4,2,0	1/1:23,0:21:2.97:21,3,0	0/0:18,0:16:37.12:0,37,323	1/1:24,0:22:47.41:562,47,0	1/1:18,0:18:41.92:443,42,0	1/1:18,0:17:7.85:494,8,0	1/1:16,0:14:36.06:548,36,0	1/1:27,0:27:42.43:668,42,0	1/1:19,0:18:48.10:745,48,0	1/1:31,0:31:56.14:1178,56,0	1/1:17,14:31:38.89:522,39,0	1/1:16,0:16:41.95:574,42,0
chr10	21034845	.	C	CCTTC	10649.68	PASS	AB=1.000;AC=42;AF=0.750;AN=56;BaseQRankSum=-5.458;DP=630;FS=8.053;HRun=0;HaplotypeScore=155.3716;InbreedingCoeff=0.7615;MQ=53.68;MQ0=9;MQRankSum=2.142;QD=21.01;ReadPosRankSum=-0.678;VQSLOD=4.1337;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:27:11.94:577,12,0	0/1:11,0:11:16.09:16,0,92	1/1:16,0:5:2.04:6,2,0	0/0:12,0:4:6.90:0,7,73	0/0:21,0:21:30.54:0,31,299	1/1:12,0:11:33.03:456,33,0	1/1:21,0:21:44.80:409,45,0	1/1:28,0:25:51.76:391,52,0	1/1:27,0:24:53.76:770,54,0	0/0:25,0:25:67.15:0,67,558	0/0:23,0:22:55.25:0,55,374	1/1:13,13:23:24:256,24,0	1/1:31,0:30:78.02:1118,78,0	1/1:26,0:25:60.10:892,60,0	0/0:24,0:24:56.76:0,57,681	0/1:25,0:25:0:0,0,0	1/1:34,0:34:1.55:4,2,0	1/1:23,0:21:2.97:21,3,0	0/0:18,0:16:37.12:0,37,323	1/1:23,0:21:47.41:562,47,0	1/1:18,0:18:41.92:443,42,0	1/1:18,0:17:7.85:494,8,0	1/1:16,0:14:36.06:548,36,0	1/1:26,0:26:42.43:668,42,0	1/1:18,0:17:48.10:745,48,0	1/1:31,0:31:56.14:1178,56,0	1/1:33,0:32:38.89:522,39,0	1/1:16,0:16:41.95:574,42,0
chr10	21034883	.	TTTCC	T	2103.55	PASS	AB=0.997;AC=21;AF=0.375;AN=56;BaseQRankSum=9.013;DP=552;FS=7.523;HRun=0;HaplotypeScore=140.9015;InbreedingCoeff=-0.1362;MQ=52.62;MQ0=6;MQRankSum=0.874;QD=6.15;ReadPosRankSum=-1.939;VQSLOD=1.9951;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:14.34:0,14,268	1/1:8,2:10:29.99:303,30,0	0/0:5,0:2:6.01:0,6,63	0/0:11,0:7:15.04:0,15,165	0/1:23,1:24:28.15:301,0,28	0/1:15,0:14:1.96:2,0,151	0/1:16,0:16:26.38:26,0,124	0/1:27,0:25:11.21:11,0,267	0/1:18,0:16:49.54:50,0,141	1/1:19,1:20:28.22:520,28,0	1/1:16,5:20:56.85:597,57,0	0/0:21,0:17:13.85:0,14,152	0/1:25,0:24:39.98:40,0,280	0/1:24,0:23:65.47:65,0,284	0/0:23,0:23:40.35:0,40,832	0/0:27,0:27:51.08:0,51,686	0/0:30,0:29:45.27:0,45,458	0/0:19,0:17:11.06:0,11,211	0/1:13,0:12:11.97:148,0,12	0/1:19,0:17:11.19:11,0,202	0/1:7,0:7:27.48:27,0,75	0/0:29,0:28:18.77:0,19,459	0/1:17,0:15:28.64:29,0,244	0/1:23,0:23:3.45:3,0,336	0/1:23,0:22:12.68:13,0,441	0/1:27,0:27:61.82:62,0,384	0/0:23,0:22:0.18:0,0,233	0/1:13,0:12:64.59:65,0,162
chr10	21034933	.	G	GA	3222.27	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-0.684;DP=588;FS=2.843;HRun=9;HaplotypeScore=71.2166;InbreedingCoeff=0.9291;MQ=75.09;MQ0=0;MQRankSum=-0.153;QD=27.54;ReadPosRankSum=-1.554;VQSLOD=3.3507;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:21,1:22:29.77:0,30,480	1/1:3,12:15:13.05:372,13,0	0/0:17,0:16:2.53:0,3,161	0/0:15,0:13:8.63:0,9,147	1/1:2,32:34:93.19:1013,93,0	0/0:18,0:18:50.99:0,51,443	0/0:17,0:17:41.97:0,42,365	0/0:25,0:24:53.97:0,54,466	0/0:11,0:11:29.98:0,30,256	1/1:2,20:22:51.71:653,52,0	1/1:3,24:28:75.04:810,75,0	0/0:18,0:17:47.99:0,48,417	0/0:20,0:20:47.97:0,48,417	0/0:17,0:17:44.98:0,45,390	0/0:25,0:25:74.97:0,75,647	0/0:27,0:27:44.87:0,45,614	0/0:24,0:24:53.93:0,54,461	0/0:14,0:13:38.99:0,39,339	1/1:1,17:18:51.11:547,51,0	0/0:29,0:29:83.93:0,84,718	0/0:4,0:4:12:0,12,104	0/0:28,0:28:77.97:0,78,677	0/0:26,0:27:71:0,71,602	0/0:24,0:24:59.94:0,60,514	0/0:25,0:25:71.98:0,72,625	0/0:22,1:23:29.79:0,30,485	0/0:23,0:22:56.96:0,57,491	0/0:16,1:17:17.81:0,18,384
chr10	21036198	.	TAC	T	3623.01	PASS	AB=0.734;AC=35;AF=0.673;AN=52;BaseQRankSum=-0.067;DP=694;FS=3.475;HRun=0;HaplotypeScore=79.8366;InbreedingCoeff=0.2527;MQ=62.01;MQ0=38;MQRankSum=1.020;QD=7.15;ReadPosRankSum=1.485;VQSLOD=3.1065;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:25,16:40:33.86:56,0,34	0/0:10,0:10:11.76:0,12,118	./.	./.	0/0:11,0:11:2.99:0,3,24	1/1:9,6:16:6.01:65,6,0	1/1:25,17:43:38.52:384,39,0	1/1:18,4:22:5.96:50,6,0	1/1:12,6:19:12.03:131,12,0	0/0:20,0:19:26.97:0,27,329	0/0:10,0:9:6:0,6,68	0/1:16,13:31:22.86:119,0,23	1/1:18,15:34:20.56:210,21,0	0/1:22,9:31:22.10:97,0,22	0/1:19,0:20:19.61:20,0,199	1/1:11,7:19:18.04:196,18,0	1/1:13,16:31:38.64:388,39,0	0/1:11,5:15:19.58:146,0,20	0/0:15,0:15:14.99:0,15,142	1/1:7,5:11:3:33,3,0	1/1:55,5:60:69.88:705,70,0	1/1:9,8:18:6.32:47,6,0	1/1:9,6:15:15.04:164,15,0	0/1:10,16:29:25.55:314,0,26	1/1:13,5:18:18.05:197,18,0	1/1:7,0:10:11.86:112,12,0	0/1:8,7:16:2.02:157,0,2	1/1:2,1:3:3.01:33,3,0
chr10	21036236	.	C	CACACAT	1100.85	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=-3.311;DP=691;FS=2.037;HRun=0;HaplotypeScore=172.9740;InbreedingCoeff=0.8162;MQ=64.56;MQ0=10;MQRankSum=3.049;QD=10.19;ReadPosRankSum=-2.662;VQSLOD=2.7076;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:57.67:0,58,492	1/1:3,8:14:2.58:48,3,0	0/0:28,0:17:44.09:0,44,426	0/0:21,0:14:26.88:0,27,286	1/1:4,16:24:2.90:48,3,0	0/0:14,0:14:15:0,15,173	0/0:38,0:38:84.91:0,85,979	0/0:27,0:27:74.28:0,74,655	0/0:20,0:19:38.97:0,39,415	1/1:8,16:25:53.95:684,54,0	1/1:9,0:8:14.89:113,15,0	0/0:32,0:32:48.46:0,48,479	0/0:31,0:31:53.49:0,53,601	0/0:25,0:24:29.89:0,30,388	0/0:31,0:31:71.98:0,72,899	0/0:23,0:23:48:0,48,533	0/0:33,0:33:74.66:0,75,932	0/1:18,0:17:4.41:4,0,388	1/1:5,0:17:31.51:362,32,0	0/0:10,0:10:17.90:0,18,165	0/0:67,0:65:99:0,153,1856	0/0:21,0:21:29.72:0,30,285	0/0:17,0:16:30.01:0,30,369	0/0:34,0:34:65.12:0,65,884	0/0:19,0:19:39:0,39,470	0/0:17,0:17:42.05:0,42,467	0/0:22,0:22:50.44:0,50,551	0/0:9,0:9:23.95:0,24,215
chr10	21038924	.	TTC	T	1247.81	PASS	AB=0.981;AC=21;AF=0.375;AN=56;BaseQRankSum=4.058;DP=409;FS=52.388;HRun=0;HaplotypeScore=131.9538;InbreedingCoeff=-0.3330;MQ=75.87;MQ0=3;MQRankSum=0.293;QD=4.44;ReadPosRankSum=8.989;VQSLOD=0.2967;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:15,1:16:27.73:108,0,28	0/0:4,0:4:8.01:0,8,53	0/0:23,0:17:32.49:0,32,348	0/0:22,0:13:15.89:0,16,193	0/0:13,0:14:16.30:0,16,94	0/1:12,0:12:24.64:90,0,25	0/1:16,0:16:37.34:52,0,37	0/0:18,0:18:15.40:0,15,294	0/1:21,0:21:71.98:121,0,72	0/0:16,0:16:34.73:0,35,172	0/0:8,0:8:14.76:0,15,73	0/1:23,0:23:30.37:30,0,204	0/1:12,1:13:34.06:98,0,34	0/1:12,1:13:69.75:78,0,70	0/0:11,0:11:30.30:0,30,489	0/1:24,0:24:58.04:111,0,58	0/1:22,0:22:34.71:81,0,35	0/1:16,0:16:10.60:84,0,11	0/0:12,0:12:11.58:0,12,114	0/1:10,0:10:23.67:24,0,108	0/1:12,1:13:35.32:69,0,35	1/1:13,1:14:2.65:93,3,0	0/1:5,0:5:11.02:11,0,11	0/1:17,1:18:16.79:90,0,17	1/1:13,1:14:10.83:143,11,0	0/1:13,0:13:23.86:24,0,118	0/1:9,0:9:33.55:55,0,34	0/1:9,0:9:45.79:50,0,46
chr10	21038925	.	TCC	T	6194.63	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-1.987;DP=406;FS=2.843;HRun=11;HaplotypeScore=115.7081;InbreedingCoeff=0.7589;MQ=75.94;MQ0=3;MQRankSum=-2.918;QD=17.80;ReadPosRankSum=2.721;VQSLOD=3.9378;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,10:16:23.52:304,24,0	1/1:2,0:4:2.74:12,3,0	0/0:24,0:17:26.21:0,26,252	0/0:21,0:13:7.84:0,8,91	1/1:4,0:14:21.89:90,22,0	1/1:3,9:12:26.64:263,27,0	1/1:3,12:16:30.03:372,30,0	1/1:13,5:18:8.75:78,9,0	1/1:5,16:21:45.07:475,45,0	1/1:2,0:16:29.26:123,29,0	1/1:3,0:8:15.94:66,16,0	1/1:12,10:23:16.36:282,16,0	1/1:4,8:12:30.06:314,30,0	1/1:6,7:13:22.58:227,23,0	0/0:11,0:11:2.66:0,3,378	1/1:6,18:24:55.25:567,55,0	1/1:6,15:21:54.08:552,54,0	1/1:2,14:16:42.09:438,42,0	1/1:3,0:12:18.68:90,19,0	1/1:4,6:10:12.01:127,12,0	1/1:6,7:13:24.05:255,24,0	1/1:2,11:13:27.03:273,27,0	1/1:1,4:5:6:59,6,0	1/1:4,13:18:36.08:383,36,0	1/1:4,10:14:36.09:382,36,0	1/1:5,5:11:17.77:170,18,0	1/1:2,7:9:15.02:160,15,0	1/1:3,6:9:14.23:134,14,0
chr10	21038935	.	CCG	C	2539.74	PASS	AB=0.996;AC=33;AF=0.589;AN=56;BaseQRankSum=7.972;DP=381;FS=4.818;HRun=0;HaplotypeScore=110.8163;InbreedingCoeff=-0.1660;MQ=73.85;MQ0=3;MQRankSum=-2.767;QD=7.86;ReadPosRankSum=7.683;VQSLOD=2.6753;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:19,0:19:81.86:87,0,82	0/0:3,0:3:1.53:0,2,17	0/0:22,1:15:14.61:0,15,136	0/0:20,1:12:0.78:0,1,38	0/1:15,0:15:29.13:92,0,29	0/1:13,0:13:51.48:77,0,51	0/1:16,1:17:9.80:145,0,10	0/1:12,0:12:15.58:16,0,33	1/1:17,0:17:38.88:200,39,0	0/1:16,0:16:21.26:76,0,21	0/1:9,0:9:14.84:57,0,15	0/1:18,0:18:28.47:94,0,28	1/1:10,1:11:11.04:156,11,0	0/1:11,0:11:1.88:63,0,2	0/0:11,0:11:10.16:0,10,374	0/1:23,0:23:9.71:186,0,10	1/1:17,3:20:38.45:317,38,0	1/1:14,0:14:35.20:189,35,0	0/1:14,0:14:34.91:51,0,35	0/1:7,0:7:5.39:67,0,5	1/1:10,1:11:4.69:91,5,0	1/1:14,1:15:6.51:147,7,0	0/1:5,0:5:11.10:21,0,11	1/1:15,0:15:32.83:191,33,0	1/1:14,1:15:17.78:202,18,0	1/1:7,0:7:15.85:117,16,0	0/1:8,0:8:8.46:30,0,8	0/1:11,0:11:33.08:33,0,54
chr10	21039068	.	CT	C	6125.98	PASS	AB=0.821;AC=42;AF=0.750;AN=56;BaseQRankSum=-7.578;DP=581;FS=8.283;HRun=13;HaplotypeScore=77.6223;InbreedingCoeff=0.5525;MQ=74.83;MQ0=1;MQRankSum=-1.459;QD=12.66;ReadPosRankSum=3.456;VQSLOD=4.7655;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:9,17:28:28.47:354,28,0	0/0:11,1:12:5.14:0,5,212	0/1:14,4:17:45.84:46,0,102	0/1:21,1:19:25.15:25,0,82	0/0:24,2:26:30.43:0,30,434	1/1:3,16:19:21.52:321,22,0	1/1:2,15:17:41.72:306,42,0	1/1:8,20:29:55.62:396,56,0	1/1:2,11:13:35.73:259,36,0	0/0:14,2:19:27.74:0,28,241	0/1:13,3:16:26.66:27,0,248	1/1:5,12:17:35.76:263,36,0	1/1:7,13:20:35.72:262,36,0	1/1:5,11:16:32.80:241,33,0	0/0:20,1:21:21.39:0,21,356	1/1:2,21:23:27.08:364,27,0	1/1:5,18:24:28.55:313,29,0	1/1:4,16:20:44.69:328,45,0	0/0:19,0:19:43.22:0,43,426	1/1:3,16:20:34.34:246,34,0	1/1:5,13:20:16.62:266,17,0	1/1:3,17:20:47.71:350,48,0	0/1:12,12:24:20.68:193,0,21	1/1:5,24:29:71.58:525,72,0	1/1:7,17:25:23.50:327,24,0	1/1:12,15:26:43.53:314,44,0	1/1:8,14:22:3.44:189,3,0	1/1:3,11:14:6.61:211,7,0
chr10	21039702	.	AGT	A	12581.31	PASS	AB=0.638;AC=49;AF=0.875;AN=56;BaseQRankSum=2.573;DP=817;FS=0.000;HRun=0;HaplotypeScore=132.3473;InbreedingCoeff=0.6789;MQ=62.03;MQ0=10;MQRankSum=1.166;QD=17.87;ReadPosRankSum=2.065;VQSLOD=4.8976;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:23,13:37:59.79:630,60,0	1/1:1,5:7:14.86:151,15,0	0/0:27,0:15:6.02:0,6,89	0/0:34,0:24:17.24:0,17,202	1/1:14,18:35:56.66:591,57,0	1/1:10,15:27:38.63:455,39,0	1/1:14,14:30:50.81:543,51,0	1/1:12,12:24:33.08:366,33,0	1/1:7,30:38:84.07:941,84,0	0/1:16,20:36:28.37:601,0,28	1/1:6,17:23:45.13:512,45,0	1/1:9,16:29:13.08:507,13,0	1/1:9,26:35:66.02:735,66,0	1/1:13,24:38:60:666,60,0	0/0:50,2:52:68.04:0,68,1473	1/1:12,25:38:65.98:732,66,0	1/1:12,15:26:47.97:529,48,0	1/1:11,14:26:50.77:526,51,0	1/1:5,7:11:1.66:155,2,0	1/1:12,15:27:32.92:354,33,0	1/1:20,25:44:69.19:789,69,0	1/1:8,12:22:32.93:357,33,0	1/1:9,10:19:21.06:240,21,0	1/1:5,20:26:57:632,57,0	1/1:9,19:27:26.91:289,27,0	1/1:12,16:30:1.45:427,1,0	1/1:4,16:22:44.79:474,45,0	1/1:4,12:16:33.09:378,33,0
chr10	21039939	.	C	CTGTG	33217.24	PASS	AB=1.000;AC=41;AF=0.732;AN=56;BaseQRankSum=-10.210;DP=1228;FS=5.243;HRun=0;HaplotypeScore=243.0458;InbreedingCoeff=0.9101;MQ=61.97;MQ0=6;MQRankSum=-0.855;QD=35.30;ReadPosRankSum=4.990;VQSLOD=4.5283;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:26,20:49:92.43:1878,92,0	0/0:18,0:18:45.15:0,45,744	0/0:43,0:34:54.01:0,54,693	0/1:63,0:37:19.06:19,0,561	0/0:37,0:37:84.03:0,84,1376	1/1:7,16:27:47.63:1055,48,0	1/1:12,21:37:65.70:1479,66,0	1/1:26,19:48:78.04:1640,78,0	1/1:16,37:59:91.99:1995,92,0	0/0:61,0:62:99:0,141,2264	0/0:20,0:22:48.08:0,48,780	1/1:14,37:54:83.44:1951,83,0	1/1:12,37:51:86.34:1939,86,0	1/1:15,34:52:92.79:2179,93,0	0/0:78,0:79:99:0,208,3344	1/1:17,42:61:95.72:2309,96,0	1/1:14,14:31:70.92:1446,71,0	1/1:12,11:26:47.25:892,47,0	0/0:23,0:24:51.04:0,51,721	1/1:9,22:34:51.18:1264,51,0	1/1:49,44:96:99:3734,182,0	1/1:14,22:38:50.85:1166,51,0	1/1:9,19:36:52.65:1014,53,0	1/1:27,24:52:96.06:2285,96,0	1/1:9,28:39:60.18:1487,60,0	1/1:7,23:36:82.67:1700,83,0	1/1:11,13:27:37.95:719,38,0	1/1:2,17:22:47.63:1066,48,0
chr10	21040053	.	CTG	C	4329.65	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=11.761;DP=1318;FS=0.717;HRun=0;HaplotypeScore=200.4981;InbreedingCoeff=0.9513;MQ=56.07;MQ0=15;MQRankSum=0.796;QD=24.32;ReadPosRankSum=2.483;VQSLOD=5.3490;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:49:98.33:0,98,1610	1/1:3,4:5:12.04:156,12,0	0/0:48,0:27:46.19:0,46,721	0/0:42,1:21:30.52:0,31,599	1/1:8,28:35:3.11:593,3,0	0/0:26,0:26:75.26:0,75,1270	0/0:31,0:31:75.26:0,75,1273	0/0:50,0:50:99:0,111,1837	0/0:62,0:62:99:0,175,2932	1/1:15,57:72:68.10:2195,68,0	1/1:4,23:25:51.12:644,51,0	0/0:61,0:61:99:0,172,2897	0/0:49,0:49:99:0,126,2098	0/0:73,0:73:99:0,199,3351	0/0:65,0:65:99:0,175,2898	0/0:65,0:65:99:0,181,3050	0/0:44,0:44:99:0,99,1782	0/0:34,0:33:61.45:0,61,1342	1/1:14,22:27:57.18:741,57,0	0/0:39,0:39:99:0,99,1651	0/0:121,1:122:99:0,235,4627	0/0:49,0:49:99:0,132,2243	0/0:28,0:28:72.23:0,72,1197	0/0:57,0:56:99:0,129,2091	0/0:31,0:31:84.29:0,84,1426	0/0:54,0:54:99:0,135,2164	0/0:33,0:33:93.27:0,93,1535	0/0:26,0:26:75.26:0,75,1273
chr10	21040103	.	A	ATGTG	5134.34	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=-0.208;DP=1370;FS=31.622;HRun=0;HaplotypeScore=270.5593;InbreedingCoeff=0.8390;MQ=55.08;MQ0=16;MQRankSum=-2.572;QD=17.58;ReadPosRankSum=-5.730;VQSLOD=2.3614;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:57:96.87:0,97,1633	1/1:10,8:19:12.69:430,13,0	0/0:45,0:12:1.27:0,1,109	0/1:48,0:14:15.03:15,0,144	1/1:20,18:49:26.31:574,26,0	0/0:29,0:29:69.22:0,69,1104	0/0:37,0:38:78.24:0,78,1235	0/0:31,0:33:71.82:0,72,1112	0/0:64,0:65:94.47:0,94,2300	1/1:43,31:84:92.02:2595,92,0	1/1:22,19:48:35.61:741,36,0	0/0:59,0:60:99:0,126,2290	0/0:52,0:53:99:0,114,1837	0/0:63,0:64:99:0,147,2419	0/0:58,0:60:99:0,147,2399	0/0:58,0:58:99:0,129,2104	0/0:32,0:34:84.17:0,84,1245	0/0:33,0:32:56.41:0,56,1270	1/1:25,7:35:23.11:780,23,0	0/0:41,0:41:99:0,102,1550	0/0:138,0:141:99:0,317,5182	0/0:47,0:47:99:0,105,1709	0/0:28,0:28:69.19:0,69,1055	0/0:50,0:52:99:0,123,2048	0/0:33,0:34:63.21:0,63,1039	0/0:43,0:43:99:0,102,1667	0/0:41,0:41:52.25:0,52,1432	0/0:19,0:19:39.13:0,39,654
chr10	21040395	.	CTG	C	1641.92	PASS	AB=0.936;AC=11;AF=0.196;AN=56;BaseQRankSum=12.209;DP=1115;FS=0.426;HRun=0;HaplotypeScore=181.2628;InbreedingCoeff=0.7466;MQ=55.57;MQ0=19;MQRankSum=-1.232;QD=10.33;ReadPosRankSum=0.053;VQSLOD=3.4639;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:43:99:0,102,1585	1/1:4,6:10:12.04:149,12,0	0/0:62,0:18:2.93:0,3,170	0/0:50,0:21:2.22:0,2,104	1/1:9,14:23:14.88:162,15,0	0/0:33,1:34:1.90:0,2,1011	0/0:37,3:40:12.89:0,13,1240	0/0:47,1:47:57.51:0,58,1413	0/0:32,0:32:81.28:0,81,1309	1/1:17,23:40:83.68:966,84,0	1/1:5,11:16:15.04:186,15,0	0/0:63,0:64:99:0,116,2333	0/0:43,0:43:99:0,117,1855	0/0:48,3:51:8.53:0,9,1626	0/0:48,1:49:60.16:0,60,1607	0/0:40,2:42:30.84:0,31,1518	0/0:52,1:52:83.38:0,83,1967	0/0:25,0:25:58.05:0,58,907	1/1:17,5:21:29.81:335,30,0	0/0:22,1:23:45.01:0,45,620	0/0:103,1:103:99:0,167,3653	0/0:27,1:28:25.03:0,25,870	0/0:20,0:20:29.66:0,30,484	0/0:64,1:65:99:0,128,2585	0/0:23,1:24:13.97:0,14,680	0/1:41,3:42:15.29:15,0,1303	0/0:31,0:31:76.59:0,77,1252	0/0:25,0:25:63.18:0,63,982
chr10	21040688	.	GT	G	4816.53	PASS	AB=0.986;AC=50;AF=0.893;AN=56;BaseQRankSum=5.343;DP=520;FS=8.058;HRun=1;HaplotypeScore=190.7064;InbreedingCoeff=0.0347;MQ=64.39;MQ0=0;MQRankSum=2.977;QD=9.26;ReadPosRankSum=10.023;VQSLOD=1.4461;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:21:52.05:252,52,0	1/1:12,1:13:14.33:139,14,0	0/1:10,0:10:0.60:1,0,74	0/1:10,1:11:12.57:69,0,13	1/1:19,0:19:15.68:170,16,0	1/1:17,0:17:29.16:214,29,0	1/1:37,0:37:30.60:292,31,0	0/1:24,0:24:63.31:80,0,63	1/1:15,0:15:41.03:193,41,0	0/1:22,0:22:32.97:80,0,33	1/1:10,0:10:24.51:117,25,0	1/1:31,0:31:22.40:299,22,0	1/1:30,0:30:79.03:406,79,0	1/1:20,0:20:18.32:202,18,0	1/1:21,0:21:15.46:189,15,0	0/1:19,0:19:7.02:141,0,7	1/1:14,0:14:32.22:152,32,0	1/1:18,0:17:29.03:174,29,0	1/1:18,0:18:13.35:109,13,0	1/1:14,1:14:31.96:157,32,0	1/1:21,1:22:53.57:260,54,0	1/1:17,0:17:42.32:189,42,0	1/1:13,0:13:30.75:155,31,0	1/1:23,0:23:26.53:204,27,0	1/1:16,0:16:20.59:141,21,0	1/1:21,0:21:46.09:165,46,0	1/1:16,0:16:42.51:232,43,0	0/1:7,0:7:20.66:37,0,21
chr10	21043392	.	C	CT	2695.42	PASS	AB=0.957;AC=12;AF=0.214;AN=56;BaseQRankSum=0.846;DP=519;FS=2.590;HRun=7;HaplotypeScore=63.0071;InbreedingCoeff=0.7963;MQ=83.46;MQ0=3;MQRankSum=1.920;QD=20.27;ReadPosRankSum=-1.284;VQSLOD=2.9632;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:72.05:0,72,685	1/1:3,10:13:18.05:217,18,0	0/0:42,1:32:51.81:0,52,496	0/0:31,0:23:11.92:0,12,220	1/1:1,29:30:84.08:961,84,0	0/0:18,0:17:48.06:0,48,457	0/1:11,0:11:5.28:5,0,225	0/0:16,0:16:29.97:0,30,272	0/0:8,0:8:18.01:0,18,169	1/1:3,16:19:45.13:533,45,0	1/1:2,14:17:44.94:503,45,0	0/0:16,0:16:33.18:0,33,358	0/0:12,0:12:30.01:0,30,277	0/0:14,0:14:36.50:0,37,338	0/0:14,0:14:33.03:0,33,310	0/0:14,0:14:36.04:0,36,343	0/0:20,0:20:54.05:0,54,513	0/0:34,0:34:67.18:0,67,760	1/1:3,19:22:56.93:639,57,0	0/0:13,0:13:36.04:0,36,338	0/0:18,0:18:42.06:0,42,405	0/0:15,0:15:42.07:0,42,405	0/0:16,0:16:26.77:0,27,256	0/0:6,0:6:12.02:0,12,116	0/0:12,0:12:33.03:0,33,312	0/1:19,2:21:15.66:16,0,415	0/0:23,0:23:69.09:0,69,656	0/0:15,0:15:24:0,24,224
chr10	21044355	.	TAAAAAAAA	T	3947.65	PASS	AB=0.773;AC=11;AF=0.196;AN=56;BaseQRankSum=2.780;DP=457;FS=20.340;HRun=20;HaplotypeScore=126.5195;InbreedingCoeff=0.8408;MQ=63.66;MQ0=4;MQRankSum=-6.912;QD=34.03;ReadPosRankSum=1.237;VQSLOD=-0.4083;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:21:36.11:0,36,695	1/1:1,7:8:14.93:315,15,0	0/0:21,0:8:11.66:0,12,149	0/0:11,0:5:5.95:0,6,105	1/1:4,24:31:71.39:1261,71,0	0/0:10,0:16:41.91:0,42,792	0/0:6,0:10:27.07:0,27,465	0/0:18,0:25:45.14:0,45,1055	0/0:6,0:12:30.10:0,30,530	1/1:4,21:26:59.85:1166,60,0	1/1:3,18:22:45.57:824,46,0	0/0:8,0:10:24.08:0,24,570	0/0:8,0:14:30.09:0,30,588	0/0:12,0:15:39.11:0,39,690	0/0:10,0:10:21.07:0,21,639	0/0:12,0:22:36.11:0,36,544	0/0:11,0:14:27.08:0,27,527	0/0:5,0:16:36.12:0,36,640	1/1:3,9:12:12.57:361,13,0	0/0:20,0:24:57.12:0,57,1010	0/0:9,0:12:21.06:0,21,449	0/0:7,0:12:32.59:0,33,442	0/0:6,0:14:27.09:0,27,455	0/0:6,0:8:11.83:0,12,189	0/0:10,0:18:45.15:0,45,864	0/1:12,1:17:20.85:21,0,503	0/0:14,0:19:48.12:0,48,873	0/0:10,0:15:29.99:0,30,373
chr10	21045263	.	GAAGAAAGA	G	22849.08	PASS	AB=0.615;AC=48;AF=0.857;AN=56;BaseQRankSum=5.465;DP=693;FS=2.251;HRun=0;HaplotypeScore=171.3574;InbreedingCoeff=0.6575;MQ=50.73;MQ0=8;MQRankSum=-4.380;QD=36.62;ReadPosRankSum=2.446;VQSLOD=4.9156;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:11,27:38:39.32:1151,39,0	1/1:2,15:17:33.11:854,33,0	0/0:23,0:12:6.02:0,6,78	0/0:17,0:7:15.02:0,15,329	1/1:4,27:31:81.10:1765,81,0	1/1:4,26:30:54.18:1376,54,0	1/1:4,15:19:12.04:250,12,0	1/1:18,13:31:39.12:788,39,0	1/1:9,17:26:33.11:837,33,0	1/1:10,23:33:69.07:1308,69,0	1/1:3,14:17:30.06:674,30,0	1/1:5,23:28:42.14:1067,42,0	1/1:8,26:34:36.12:926,36,0	1/1:10,21:31:36.12:931,36,0	0/0:29,0:29:72.21:0,72,2391	1/1:7,19:26:32.63:854,33,0	0/1:10,13:22:19.87:370,0,20	1/1:18,2:20:13.13:641,13,0	1/1:7,11:18:33:648,33,0	1/1:4,23:27:63.21:1501,63,0	1/1:4,11:15:15:306,15,0	1/1:2,16:18:39.08:840,39,0	1/1:3,17:20:32.93:808,33,0	0/1:8,18:26:12.47:514,0,12	1/1:3,13:16:24.08:622,24,0	1/1:5,18:23:54.16:1246,54,0	1/1:5,36:41:69.24:1784,69,0	1/1:4,12:16:32.85:791,33,0
chr10	21046750	.	CT	C	27064.30	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=8.096;DP=847;FS=7.447;HRun=2;HaplotypeScore=100.7942;InbreedingCoeff=0.9998;MQ=84.17;MQ0=0;MQRankSum=-9.405;QD=35.94;ReadPosRankSum=4.176;VQSLOD=4.8498;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,32:32:90.29:1169,90,0	1/1:0,10:10:30.10:390,30,0	0/0:27,0:27:81.27:0,81,1213	0/0:23,0:23:63.14:0,63,877	1/1:0,37:37:99:1285,99,0	1/1:1,24:25:69.22:896,69,0	1/1:1,23:24:63.20:818,63,0	1/1:0,38:38:99:1413,111,0	1/1:0,26:26:72.23:935,72,0	1/1:1,39:40:99:1518,117,0	1/1:0,22:22:57.19:740,57,0	1/1:0,33:33:96.30:1246,96,0	1/1:0,38:38:99:1324,102,0	1/1:0,34:34:93.30:1208,93,0	0/0:44,0:44:99:0,132,1940	1/1:0,41:41:99:1519,117,0	1/1:0,34:34:93.30:1208,93,0	1/1:1,17:18:48.16:623,48,0	1/1:3,19:22:57.17:725,57,0	1/1:1,39:40:99:1402,108,0	1/1:0,34:34:99:1325,102,0	1/1:0,23:23:60.20:779,60,0	1/1:0,30:30:72.21:935,72,0	1/1:0,30:30:81.26:1052,81,0	1/1:0,30:30:87.28:1130,87,0	1/1:0,37:37:99:1441,111,0	1/1:2,39:41:99:1441,111,0	1/1:0,14:14:42.14:545,42,0
chr10	21047798	.	C	CATCT	9909.51	PASS	AB=1.000;AC=29;AF=0.558;AN=52;BaseQRankSum=-10.477;DP=718;FS=22.404;HRun=0;HaplotypeScore=129.0717;InbreedingCoeff=0.8762;MQ=64.62;MQ0=10;MQRankSum=-1.135;QD=23.43;ReadPosRankSum=-2.919;VQSLOD=2.7500;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:29:10.17:0,10,442	1/1:6,9:15:12.04:282,12,0	./.	./.	1/1:18,24:43:1.67:1011,2,0	0/0:29,0:29:46.71:0,47,692	0/1:19,0:19:41.41:41,0,343	1/1:40,0:44:21.84:199,22,0	0/0:18,0:18:36.12:0,36,551	1/1:13,22:36:70.15:1504,70,0	1/1:9,15:25:30.10:705,30,0	1/1:19,18:37:45.15:1009,45,0	1/1:13,12:30:27.09:618,27,0	1/1:8,14:24:30.10:705,30,0	0/0:22,0:22:39.13:0,39,601	0/0:25,0:25:54.17:0,54,808	1/1:15,16:31:42.14:978,42,0	1/1:11,11:25:33.11:734,33,0	1/1:15,4:19:21.06:429,21,0	0/0:28,0:28:39.13:0,39,603	0/0:18,0:18:30.10:0,30,465	1/1:12,10:22:18.06:423,18,0	1/1:13,13:29:24.08:565,24,0	1/1:6,13:21:30.57:706,31,0	0/0:28,0:28:51.17:0,51,781	0/0:27,0:27:45.13:0,45,638	0/0:26,0:25:48.15:0,48,721	0/0:16,0:16:30.10:0,30,465
chr10	21048632	.	AAATAT	A	1374.81	PASS	AB=1.000;AC=21;AF=0.750;AN=28;BaseQRankSum=1.740;DP=125;FS=20.589;HRun=0;HaplotypeScore=54.0008;InbreedingCoeff=0.1937;MQ=46.78;MQ0=5;MQRankSum=2.950;QD=23.30;ReadPosRankSum=1.978;VQSLOD=1.1311;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,0:3:5.89:39,6,0	1/1:0,1:1:3.01:58,3,0	0/0:15,0:4:0.25:0,0,54	0/0:51,0:10:14.61:0,15,139	./.	./.	./.	0/1:17,0:15:99:447,0,179	1/1:1,0:1:3:25,3,0	1/1:1,0:1:3.01:57,3,0	./.	./.	./.	./.	./.	./.	1/1:8,2:10:15.02:216,15,0	1/1:12,2:14:15.75:441,16,0	./.	./.	0/1:2,0:2:0:0,0,0	./.	./.	./.	1/1:4,1:5:4.57:56,5,0	0/1:2,0:2:10.62:11,0,16	1/1:1,0:1:2.99:24,3,0	1/1:1,1:2:6.02:105,6,0
chr10	21048636	.	AT	A	545.21	PASS	AB=0.920;AC=15;AF=0.625;AN=24;BaseQRankSum=3.465;DP=116;FS=18.301;HRun=2;HaplotypeScore=56.3796;InbreedingCoeff=0.2690;MQ=33.18;MQ0=6;MQRankSum=0.988;QD=10.10;ReadPosRankSum=1.094;VQSLOD=0.0192;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:1,1:2:0.89:0,1,2	1/1:1,0:1:2.84:14,3,0	0/0:14,0:3:1.85:0,2,38	0/0:46,0:6:5.78:0,6,69	./.	./.	./.	0/1:13,6:17:99:252,0,177	./.	1/1:0,1:1:3.01:38,3,0	./.	./.	./.	./.	./.	./.	1/1:4,5:9:11.19:77,11,0	1/1:5,7:12:13.72:183,14,0	./.	./.	0/1:2,0:2:0:0,0,0	./.	./.	./.	1/1:4,1:5:4.25:29,4,0	0/1:2,0:2:1.93:2,0,35	./.	1/1:2,1:2:5.61:46,6,0
chr10	21048648	.	TATATATATATATATATA	T	847.77	PASS	AB=0.912;AC=12;AF=0.462;AN=26;BaseQRankSum=4.255;DP=118;FS=4.134;HRun=0;HaplotypeScore=89.3316;InbreedingCoeff=0.0771;MQ=25.30;MQ0=9;MQRankSum=-0.160;QD=13.90;ReadPosRankSum=1.727;VQSLOD=1.4468;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:3,0:3:2.98:0,3,22	1/1:1,0:1:1.25:3,1,0	0/0:11,0:1:3.01:0,3,30	0/0:37,0:5:6.02:0,6,76	./.	./.	./.	0/1:17,0:19:99:143,0,365	./.	0/1:2,0:2:5.38:5,0,42	./.	./.	./.	./.	./.	./.	1/1:10,2:11:5.08:278,5,0	1/1:14,2:15:22.44:368,22,0	./.	./.	0/0:2,0:2:3.37:0,3,17	./.	./.	1/1:1,0:1:1.25:3,1,0	0/0:3,1:3:7.99:0,8,34	0/1:2,0:2:20.93:21,0,30	./.	0/1:4,1:3:10.71:129,0,11
chr10	21048662	.	TATA	T	1174.97	PASS	AB=0.806;AC=25;AF=0.735;AN=34;BaseQRankSum=-0.085;DP=99;FS=3.302;HRun=0;HaplotypeScore=35.9489;InbreedingCoeff=0.2144;MQ=51.24;MQ0=9;MQRankSum=-0.037;QD=17.03;ReadPosRankSum=2.037;VQSLOD=2.9492;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:4:9.03:120,9,0	0/1:1,0:2:1.51:11,0,2	./.	0/0:23,0:6:6.38:0,6,55	0/0:1,0:1:2.98:0,3,21	1/1:1,0:1:3.01:40,3,0	./.	0/1:17,0:15:83.78:320,0,84	./.	0/0:0,0:1:2.37:0,2,8	./.	./.	./.	./.	./.	./.	1/1:6,6:11:9.03:137,9,0	1/1:8,7:14:17.32:265,17,0	0/1:2,0:2:2.35:35,0,2	1/1:1,0:1:3.01:40,3,0	1/1:0,2:2:2.60:40,3,0	./.	./.	1/1:1,0:1:1.25:3,1,0	1/1:3,1:3:8.39:88,8,0	1/1:0,1:1:3.01:56,3,0	1/1:1,0:1:3.01:40,3,0	1/1:5,0:2:6.02:89,6,0
chr10	21048664	.	TA	T	1077.96	PASS	AB=0.690;AC=26;AF=0.722;AN=36;BaseQRankSum=-0.351;DP=91;FS=3.430;HRun=1;HaplotypeScore=27.3468;InbreedingCoeff=0.2500;MQ=54.14;MQ0=8;MQRankSum=-0.247;QD=16.84;ReadPosRankSum=2.508;VQSLOD=3.9865;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,4:5:9.03:120,9,0	0/0:2,0:2:0.12:0,0,3	./.	0/0:18,0:5:6.38:0,6,55	0/0:1,0:1:2.98:0,3,21	1/1:0,1:1:3.01:40,3,0	./.	0/1:7,10:15:44.83:368,0,45	./.	0/0:1,0:1:2.37:0,2,8	./.	./.	./.	1/1:1,0:1:3.01:39,3,0	./.	./.	1/1:9,1:9:9.03:109,9,0	1/1:11,1:11:14.62:137,15,0	0/1:2,1:2:2.35:35,0,2	1/1:0,1:1:3.01:40,3,0	1/1:2,0:2:2.81:40,3,0	./.	./.	1/1:1,0:1:0.89:2,1,0	1/1:4,0:3:9.03:120,9,0	1/1:1,0:1:2.99:23,3,0	1/1:0,1:1:3.01:40,3,0	1/1:3,2:2:6.02:75,6,0
chr10	21049335	.	GA	G	14368.59	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=2.837;DP=651;FS=8.543;HRun=8;HaplotypeScore=67.3056;InbreedingCoeff=0.9430;MQ=79.31;MQ0=0;MQRankSum=-5.525;QD=24.69;ReadPosRankSum=5.128;VQSLOD=5.2514;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,37:42:95.72:926,96,0	1/1:1,13:14:39.06:376,39,0	0/0:20,0:20:45.12:0,45,526	0/0:29,0:29:3.88:0,4,499	1/1:1,23:24:53.99:509,54,0	1/1:2,20:22:57.09:550,57,0	1/1:5,18:23:48.07:463,48,0	1/1:6,22:28:63.04:589,63,0	1/1:1,21:22:60.09:579,60,0	1/1:1,18:19:54.09:521,54,0	1/1:1,11:12:33.05:318,33,0	1/1:0,24:24:69.11:666,69,0	1/1:1,13:14:36.06:347,36,0	1/1:0,16:16:45.07:434,45,0	0/0:19,0:19:54.17:0,54,652	1/1:4,28:32:81.12:782,81,0	1/1:1,44:45:99:1245,129,0	1/1:0,25:25:69.11:666,69,0	1/1:4,19:23:60.07:569,60,0	1/1:3,11:14:30.04:289,30,0	1/1:1,29:30:72.11:695,72,0	1/1:2,21:23:60.09:579,60,0	1/1:3,14:17:39.06:374,39,0	1/1:1,24:25:66.11:637,66,0	1/1:2,27:29:72.11:694,72,0	1/1:2,16:18:48.06:458,48,0	1/1:0,25:25:69.11:666,69,0	1/1:0,16:16:45.07:434,45,0
chr10	21049791	.	AG	A	22116.55	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=10.184;DP=773;FS=1.711;HRun=2;HaplotypeScore=76.6959;InbreedingCoeff=0.9990;MQ=93.17;MQ0=0;MQRankSum=-6.375;QD=38.33;ReadPosRankSum=4.808;VQSLOD=5.3461;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,53:54:99:1804,129,0	0/0:7,0:7:21.07:0,21,336	0/0:37,0:37:99:0,108,1691	0/0:28,0:28:78.19:0,78,1154	0/0:19,0:19:57.18:0,57,885	1/1:0,21:21:63.21:881,63,0	1/1:0,25:25:63.21:881,63,0	1/1:0,27:27:81.24:1099,81,0	1/1:0,25:25:72.24:1007,72,0	0/0:29,0:29:87.30:0,87,1389	0/0:16,0:16:48.16:0,48,765	1/1:0,26:26:63.20:881,63,0	1/1:0,37:37:99:1510,108,0	1/1:0,43:43:99:1803,129,0	0/0:41,0:41:99:0,123,1940	1/1:0,32:32:90.30:1259,90,0	1/1:0,26:26:66.22:923,66,0	1/1:0,21:21:63.21:877,63,0	0/0:19,0:19:57.19:0,57,909	1/1:0,30:30:81.27:1123,81,0	1/1:0,40:40:99:1469,105,0	1/1:0,18:18:48.16:671,48,0	1/1:0,24:24:72.24:1007,72,0	1/1:0,29:29:78.26:1091,78,0	1/1:0,29:29:84.28:1175,84,0	1/1:1,32:33:51.31:1271,51,0	1/1:0,28:28:75.25:1049,75,0	1/1:0,9:9:24.08:336,24,0
chr10	21050916	.	A	AC	1112.81	PASS	AB=1.000;AC=27;AF=0.482;AN=56;BaseQRankSum=-5.431;DP=465;FS=13.207;HRun=11;HaplotypeScore=77.1072;InbreedingCoeff=0.5669;MQ=67.72;MQ0=16;MQRankSum=0.520;QD=6.18;ReadPosRankSum=0.313;VQSLOD=0.6439;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:22:30.33:111,0,30	0/0:4,0:4:4.63:0,5,17	0/0:58,0:14:17.60:0,18,145	0/0:69,0:20:19.76:0,20,160	0/0:20,0:21:26.70:0,27,101	0/0:22,0:21:15.08:0,15,97	0/0:21,0:21:23.39:0,23,179	0/0:15,0:15:16:0,16,89	1/1:7,0:7:8.42:86,8,0	0/0:16,0:16:20.21:0,20,86	0/0:14,0:14:20.42:0,20,92	1/1:15,1:16:20.41:154,20,0	1/1:13,0:13:24.56:168,25,0	1/1:9,0:9:4.87:60,5,0	0/0:11,3:14:9.09:0,9,147	1/1:14,0:14:20.09:135,20,0	1/1:14,0:14:13.04:147,13,0	1/1:14,0:14:8.73:107,9,0	0/0:14,0:14:21.09:0,21,69	0/1:12,0:12:3.97:33,0,4	1/1:9,0:9:8.61:47,9,0	0/1:11,0:11:26.35:51,0,26	0/1:5,0:5:4.70:30,0,5	0/1:8,0:8:12.50:16,0,13	0/0:11,0:11:11.34:0,11,66	1/1:12,0:12:11.64:74,12,0	1/1:11,0:11:12.78:80,13,0	1/1:3,0:3:2.80:13,3,0
chr10	21051663	.	A	AC	27027.42	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-11.387;DP=737;FS=0.000;HRun=1;HaplotypeScore=67.9240;InbreedingCoeff=0.9984;MQ=89.98;MQ0=0;MQRankSum=-8.179;QD=41.52;ReadPosRankSum=6.696;VQSLOD=4.5488;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,41:42:99:1630,102,0	1/1:0,11:11:30.10:478,30,0	0/0:29,0:29:87.19:0,87,1092	0/0:26,0:26:63.62:0,64,865	1/1:1,35:36:96.33:1534,96,0	1/1:1,20:21:48.16:767,48,0	1/1:0,19:19:51.17:815,51,0	1/1:1,38:39:99:1764,114,0	1/1:0,25:25:60.20:958,60,0	1/1:1,35:36:99:1662,105,0	1/1:0,16:16:48.16:765,48,0	1/1:0,22:23:45.15:719,45,0	1/1:1,22:23:57:911,57,0	1/1:0,33:33:90.30:1424,90,0	0/0:30,0:30:90.27:0,90,1224	1/1:0,29:29:75.26:1199,75,0	1/1:1,29:30:75.26:1199,75,0	1/1:0,25:25:66.23:1054,66,0	1/1:0,21:22:66.22:1048,66,0	1/1:3,26:29:72.24:1136,72,0	1/1:0,33:33:78.27:1247,78,0	1/1:0,26:27:72.25:1143,72,0	1/1:0,19:19:48.16:764,48,0	1/1:1,39:40:99:1676,105,0	1/1:0,22:21:54.18:863,54,0	1/1:1,20:21:60.19:925,60,0	1/1:0,22:22:63.18:1007,63,0	1/1:0,8:8:21.07:336,21,0
chr10	21054416	.	C	CATAT	14461.63	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-4.484;DP=581;FS=2.705;HRun=0;HaplotypeScore=95.1132;InbreedingCoeff=0.8017;MQ=71.19;MQ0=4;MQRankSum=-1.102;QD=27.55;ReadPosRankSum=0.377;VQSLOD=4.3840;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,19:22:23.87:543,24,0	1/1:6,0:10:9.03:163,9,0	0/0:18,0:11:17.39:0,17,133	0/0:16,0:11:3.41:0,3,44	1/1:8,0:13:8.41:100,8,0	1/1:0,18:20:17.85:392,18,0	1/1:5,16:22:6.02:147,6,0	1/1:7,37:47:99:1713,120,0	1/1:3,19:23:18.06:455,18,0	1/1:8,0:18:36.10:547,36,0	1/1:10,0:14:17.99:225,18,0	1/1:2,24:30:44.73:1011,45,0	1/1:2,19:22:29.89:695,30,0	1/1:2,10:12:15.05:379,15,0	0/0:21,0:22:44.23:0,44,763	1/1:3,21:26:35.91:847,36,0	1/1:4,13:18:7.06:731,7,0	1/1:1,14:15:15.05:379,15,0	1/1:6,0:14:26.92:297,27,0	1/1:5,26:36:50.27:980,50,0	1/1:2,10:19:37.56:604,38,0	1/1:5,9:14:15.05:379,15,0	1/1:1,24:26:26.62:569,27,0	1/1:1,7:10:14.84:316,15,0	1/1:4,15:22:41.51:872,42,0	1/1:2,20:27:74.46:1225,74,0	1/1:6,14:22:26.88:571,27,0	1/1:9,9:18:16.88:322,17,0
chr10	21056606	.	CT	C	4138.51	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=8.263;DP=596;FS=3.551;HRun=1;HaplotypeScore=66.3319;InbreedingCoeff=0.9997;MQ=83.90;MQ0=0;MQRankSum=-1.483;QD=39.79;ReadPosRankSum=-0.222;VQSLOD=4.1251;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:42.14:0,42,672	1/1:0,11:11:33.11:461,33,0	0/0:23,0:23:65.65:0,66,961	0/0:15,0:15:31.27:0,31,423	1/1:0,24:24:66.22:912,66,0	0/0:29,0:29:87.25:0,87,1360	0/0:25,0:25:75.26:0,75,1194	0/0:22,0:22:66.22:0,66,1034	0/0:22,0:22:66.21:0,66,1032	1/1:0,29:29:87.29:1214,87,0	1/1:0,28:28:78.26:1090,78,0	0/0:21,0:21:60.20:0,60,958	0/0:26,0:26:69.23:0,69,1100	0/0:22,0:22:63.21:0,63,1005	0/0:21,0:21:63.21:0,63,1007	0/0:19,0:19:54.18:0,54,863	0/0:26,0:26:75.26:0,75,1199	0/0:19,0:19:54.16:0,54,838	1/1:0,12:12:33.11:460,33,0	0/0:25,0:25:75.26:0,75,1192	0/0:17,0:17:48.16:0,48,764	0/0:28,0:28:84.24:0,84,1272	0/0:21,0:21:63.21:0,63,1007	0/0:12,0:12:36.12:0,36,573	0/0:18,0:18:48.16:0,48,766	0/0:26,0:26:78.27:0,78,1247	0/0:28,0:28:78.25:0,78,1224	0/0:13,0:13:39.13:0,39,623
chr10	21056673	.	CTT	C	8612.43	PASS	AB=0.650;AC=41;AF=0.732;AN=56;BaseQRankSum=-10.013;DP=524;FS=9.244;HRun=12;HaplotypeScore=85.2947;InbreedingCoeff=0.8937;MQ=71.82;MQ0=0;MQRankSum=-1.143;QD=22.03;ReadPosRankSum=4.554;VQSLOD=3.9181;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,8:9:21.03:213,21,0	0/0:1,0:7:14.97:0,15,53	0/0:14,0:16:36.91:0,37,354	0/0:13,0:13:20.60:0,21,215	0/0:7,1:21:18.69:0,19,165	1/1:4,19:23:54.10:549,54,0	1/1:3,7:10:15.02:153,15,0	1/1:10,23:33:63.05:640,63,0	1/1:5,12:18:38.79:378,39,0	0/0:11,0:29:37.89:0,38,196	0/0:7,0:23:52.54:0,53,230	1/1:3,17:21:50.84:500,51,0	1/1:3,28:32:48.87:688,49,0	1/1:1,17:18:45.08:458,45,0	0/0:20,0:22:47.64:0,48,664	1/1:3,15:20:38.55:430,39,0	1/1:2,14:16:39.06:397,39,0	1/1:3,9:12:24.03:244,24,0	0/1:5,1:13:18.15:18,0,93	1/1:5,20:26:65.77:641,66,0	1/1:2,5:7:15:153,15,0	1/1:3,22:26:59.62:599,60,0	1/1:2,13:16:31.93:386,32,0	1/1:4,12:16:33.05:336,33,0	1/1:3,21:24:51.08:519,51,0	1/1:1,13:14:36.05:366,36,0	1/1:1,30:31:81.05:824,81,0	1/1:2,4:6:12:122,12,0
chr10	21057579	.	GTT	G	7844.51	PASS	AB=0.643;AC=37;AF=0.661;AN=56;BaseQRankSum=8.043;DP=480;FS=7.896;HRun=12;HaplotypeScore=83.8074;InbreedingCoeff=0.9102;MQ=73.50;MQ0=1;MQRankSum=-7.367;QD=25.06;ReadPosRankSum=2.246;VQSLOD=4.6222;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,22:28:72.07:719,72,0	0/0:9,0:9:15.05:0,15,222	0/0:22,0:17:30.02:0,30,341	0/0:16,0:12:14.72:0,15,123	0/0:19,0:22:59.14:0,59,765	1/1:5,13:18:46.38:477,46,0	1/1:1,16:18:50.85:500,51,0	1/1:11,15:28:43.21:579,43,0	1/1:0,6:6:18.04:183,18,0	0/0:19,0:20:57.04:0,57,777	0/0:17,0:17:48.15:0,48,696	1/1:5,11:15:39.07:396,39,0	1/1:2,7:9:21:204,21,0	1/1:4,6:10:27.05:274,27,0	0/0:17,0:16:48.11:0,48,672	1/1:2,8:10:24.04:244,24,0	0/0:22,0:22:57.18:0,57,829	1/1:10,17:27:63.10:639,63,0	0/0:18,0:22:43.32:0,43,489	1/1:4,15:19:48.08:488,48,0	1/1:1,9:10:27.06:275,27,0	1/1:3,13:16:45.07:448,45,0	1/1:5,12:17:48.05:472,48,0	1/1:1,5:6:15.03:153,15,0	1/1:2,20:23:68.86:674,69,0	0/1:8,9:18:30.53:301,0,31	1/1:4,17:21:57.08:569,57,0	1/1:8,5:13:26.97:250,27,0
chr10	21057618	.	AT	A	7305.01	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=11.580;DP=469;FS=13.326;HRun=9;HaplotypeScore=71.9945;InbreedingCoeff=0.9759;MQ=66.24;MQ0=0;MQRankSum=-4.745;QD=23.26;ReadPosRankSum=-0.293;VQSLOD=4.4423;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,20:24:54.01:493,54,0	0/0:10,0:10:30.09:0,30,346	0/0:7,0:6:12.01:0,12,125	0/0:10,0:10:14.37:0,14,125	0/0:23,0:23:63.13:0,63,711	1/1:3,14:17:39.02:357,39,0	1/1:6,10:16:39:352,39,0	1/1:7,26:33:77.96:691,78,0	1/1:2,2:4:12.01:110,12,0	0/0:25,0:25:72.21:0,72,831	0/0:15,0:15:39.11:0,39,442	1/1:2,19:21:63.01:568,63,0	1/1:1,9:10:30.01:271,30,0	1/1:2,11:13:39:348,39,0	0/0:24,0:24:69.18:0,69,777	1/1:2,9:11:30:270,30,0	0/0:20,0:20:56.99:0,57,627	1/1:4,19:23:51.01:466,51,0	0/0:20,0:20:53.83:0,54,600	1/1:3,21:24:60:544,60,0	1/1:4,2:6:12:106,12,0	1/1:0,15:15:45.02:411,45,0	1/1:0,16:16:48.03:439,48,0	1/1:2,5:7:11.99:106,12,0	1/1:3,29:32:90.04:821,90,0	1/1:2,18:20:19.41:432,19,0	1/1:1,14:15:36.01:329,36,0	1/1:1,6:7:21.01:192,21,0
chr10	21058527	.	TTGGACTAC	T	25995.70	PASS	AB=0.521;AC=37;AF=0.661;AN=56;BaseQRankSum=15.997;DP=639;FS=4.742;HRun=0;HaplotypeScore=183.9796;InbreedingCoeff=0.9080;MQ=69.57;MQ0=0;MQRankSum=-18.234;QD=63.56;ReadPosRankSum=2.137;VQSLOD=4.7329;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,18:20:45.15:1238,45,0	0/0:16,0:16:48.12:0,48,1884	0/0:13,0:13:27.13:0,27,1200	0/0:17,0:17:30.35:0,30,1447	0/0:37,0:37:99:0,105,4518	1/1:1,32:33:72.25:1991,72,0	1/1:4,16:20:45.15:1248,45,0	1/1:5,28:33:84.26:2076,84,0	1/1:1,16:17:42.14:1164,42,0	0/0:31,0:31:87.30:0,87,3600	0/0:29,0:29:84.27:0,84,3473	1/1:0,24:24:63.22:1710,63,0	1/1:1,25:26:63.22:1759,63,0	1/1:2,15:17:45.15:1255,45,0	0/0:33,0:33:99:0,99,4095	1/1:1,14:15:42.14:1173,42,0	0/0:34,0:34:96.33:0,96,4100	1/1:1,13:14:33.11:923,33,0	0/0:20,0:20:54.19:0,54,2349	1/1:1,29:30:84.29:2282,84,0	1/1:2,6:8:9.03:221,9,0	1/1:4,24:28:54.18:1453,54,0	1/1:2,25:27:54.18:1456,54,0	1/1:1,9:10:18.06:458,18,0	1/1:3,17:20:51.18:1415,51,0	0/1:3,34:37:29.71:2665,0,30	1/1:4,19:23:39.13:1091,39,0	1/1:0,7:7:15.05:419,15,0
chr10	21060130	.	AT	A	2792.21	PASS	AB=0.756;AC=34;AF=0.607;AN=56;BaseQRankSum=-4.836;DP=513;FS=9.865;HRun=14;HaplotypeScore=67.6851;InbreedingCoeff=0.6013;MQ=63.47;MQ0=11;MQRankSum=0.265;QD=8.33;ReadPosRankSum=5.055;VQSLOD=2.0849;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,17:29:38.75:243,39,0	0/0:4,0:8:17.37:0,17,113	0/1:13,0:11:11.57:12,0,41	0/0:5,0:4:6.46:0,6,48	0/0:11,0:22:36.61:0,37,230	1/1:6,15:22:37.68:252,38,0	0/1:9,8:16:34.98:82,0,35	0/0:25,0:24:29.19:0,29,296	1/1:2,13:15:32.72:226,33,0	0/0:16,0:27:27.35:0,27,154	0/0:12,0:25:39.09:0,39,247	0/1:7,7:14:19.03:32,0,19	1/1:3,10:13:23.77:164,24,0	1/1:10,4:16:14.97:106,15,0	0/0:15,0:18:30.03:0,30,278	1/1:4,6:10:8.92:76,9,0	0/0:12,0:27:34.49:0,34,197	1/1:7,15:21:35.68:246,36,0	0/0:8,0:17:32.90:0,33,180	0/1:12,11:23:47.87:149,0,48	1/1:6,3:8:10.94:68,11,0	1/1:4,9:13:23.74:164,24,0	1/1:11,11:23:4.16:179,4,0	1/1:9,15:24:0.50:264,0,0	1/1:6,15:21:25.25:263,25,0	1/1:8,14:22:13.71:236,14,0	1/1:6,5:12:16.70:108,17,0	1/1:4,9:12:4.95:128,5,0
chr10	21060366	.	GA	G	7591.17	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=0.168;DP=485;FS=2.404;HRun=10;HaplotypeScore=77.8140;InbreedingCoeff=0.8876;MQ=76.12;MQ0=1;MQRankSum=-2.270;QD=18.70;ReadPosRankSum=4.486;VQSLOD=5.6646;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,14:17:29.01:240,29,0	1/1:1,2:3:6:52,6,0	0/0:32,0:19:5.45:0,5,182	0/0:23,0:16:12.56:0,13,107	1/1:3,16:20:35:292,35,0	1/1:6,16:22:47.98:417,48,0	1/1:3,14:17:21.42:341,21,0	1/1:6,24:30:65.93:570,66,0	1/1:4,9:13:23.96:208,24,0	1/1:0,16:16:47.99:417,48,0	1/1:7,12:19:35.97:312,36,0	1/1:7,12:19:38.94:335,39,0	1/1:7,15:22:44.97:391,45,0	1/1:2,15:17:41.97:364,42,0	0/0:21,1:22:27.84:0,28,492	1/1:1,5:6:14.99:130,15,0	1/1:4,15:19:38.97:339,39,0	1/1:5,8:13:26.93:227,27,0	1/1:6,12:19:35.97:310,36,0	1/1:4,15:19:35.97:312,36,0	1/1:3,6:9:17.99:156,18,0	1/1:6,13:19:47.98:416,48,0	1/1:3,21:24:56.98:495,57,0	1/1:3,5:8:11.98:104,12,0	1/1:2,16:18:41.97:364,42,0	1/1:2,10:12:32.92:278,33,0	1/1:3,14:17:38.97:338,39,0	1/1:2,6:8:20.99:181,21,0
chr10	21060382	.	GT	G	3203.75	PASS	AB=0.709;AC=32;AF=0.571;AN=56;BaseQRankSum=3.842;DP=528;FS=7.280;HRun=13;HaplotypeScore=96.2494;InbreedingCoeff=0.3358;MQ=70.26;MQ0=1;MQRankSum=-5.562;QD=8.75;ReadPosRankSum=2.156;VQSLOD=2.8176;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:8,5:13:24.20:105,0,24	0/0:4,0:5:8.85:0,9,73	0/0:33,1:17:16.17:0,16,106	0/0:23,0:13:4.03:0,4,51	0/0:20,1:23:14.26:0,14,288	1/1:5,17:23:35.37:247,35,0	1/1:4,10:18:31.95:198,32,0	0/1:24,14:38:64.81:264,0,65	1/1:5,11:17:5.59:195,6,0	0/0:15,0:16:17.80:0,18,142	0/0:17,1:18:22.88:0,23,340	0/1:10,8:18:9.99:86,0,10	1/1:11,9:21:3.83:156,4,0	1/1:12,7:19:0.12:145,0,0	0/0:20,0:21:19.88:0,20,299	1/1:2,4:7:13.93:93,14,0	0/1:18,0:19:3.64:4,0,279	1/1:3,7:11:3.46:111,3,0	0/0:20,1:22:19.89:0,20,313	1/1:5,20:25:20.49:295,20,0	1/1:3,4:8:10.86:65,11,0	0/1:8,7:16:28.64:138,0,29	1/1:6,19:27:48.64:337,49,0	0/1:6,4:10:36.03:86,0,36	1/1:5,14:19:35.73:262,36,0	1/1:7,8:17:27.01:164,27,0	0/1:9,11:21:2.40:168,0,2	0/1:4,15:19:54.33:271,0,54
chr10	21060505	.	TG	T	16759.70	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=9.302;DP=624;FS=0.325;HRun=1;HaplotypeScore=62.4056;InbreedingCoeff=0.9996;MQ=83.07;MQ0=0;MQRankSum=-2.534;QD=38.00;ReadPosRankSum=4.646;VQSLOD=5.2074;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,31:31:81.27:1132,81,0	0/0:13,0:13:39.13:0,39,618	0/0:22,0:22:65.46:0,65,864	0/0:16,0:16:32.47:0,32,556	0/0:20,0:20:57.19:0,57,911	1/1:0,27:27:72.24:1005,72,0	1/1:0,23:23:63.21:880,63,0	1/1:0,27:27:81.15:995,81,0	1/1:0,17:17:51.17:713,51,0	0/0:26,0:26:78.27:0,78,1243	0/0:28,0:28:81.26:0,81,1262	1/1:0,25:25:69.23:965,69,0	1/1:0,29:29:84.28:1172,84,0	1/1:0,18:18:39.13:545,39,0	0/0:32,0:32:93.30:0,93,1456	1/1:0,18:18:45.15:629,45,0	0/0:9,0:9:24.08:0,24,383	1/1:0,15:15:39.13:545,39,0	0/0:17,0:17:48.11:0,48,712	1/1:0,27:27:66.22:922,66,0	1/1:0,31:31:84.28:1175,84,0	1/1:0,23:23:63.21:881,63,0	1/1:0,24:24:66.22:922,66,0	1/1:0,24:24:66.22:923,66,0	1/1:0,20:20:57.19:797,57,0	1/1:0,22:22:66.22:922,66,0	1/1:0,24:24:69.23:965,69,0	1/1:0,16:16:48.16:671,48,0
chr10	21063475	.	G	GC	26427.30	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=6.297;DP=662;FS=2.908;HRun=0;HaplotypeScore=144.3329;InbreedingCoeff=0.9999;MQ=81.73;MQ0=0;MQRankSum=-10.016;QD=44.49;ReadPosRankSum=4.936;VQSLOD=3.8794;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,48:49:99:2050,129,0	1/1:1,15:16:42.14:672,42,0	0/0:23,0:23:65.01:0,65,867	0/0:27,0:27:75.14:0,75,999	1/1:0,24:24:69.24:1103,69,0	1/1:0,19:19:54.18:863,54,0	1/1:1,23:24:69.24:1103,69,0	1/1:2,17:19:48.16:768,48,0	1/1:1,21:22:63.21:1006,63,0	1/1:0,22:22:66.22:1048,66,0	1/1:0,22:22:63.21:994,63,0	1/1:1,31:32:93.32:1471,93,0	1/1:1,22:23:66.22:1044,66,0	1/1:2,28:30:84.29:1343,84,0	0/0:18,0:18:54.18:0,54,755	1/1:0,31:31:87.30:1391,87,0	1/1:1,24:25:66.23:1055,66,0	1/1:1,19:20:57.19:911,57,0	1/1:2,26:28:84.29:1340,84,0	1/1:0,31:31:93.32:1487,93,0	1/1:1,16:17:45.15:720,45,0	1/1:0,15:15:42.14:671,42,0	1/1:1,22:23:57.19:911,57,0	1/1:0,29:29:84.29:1343,84,0	1/1:0,25:25:69.24:1102,69,0	1/1:1,17:18:51.15:788,51,0	1/1:0,15:15:39.13:624,39,0	1/1:0,15:15:39.13:623,39,0
chr10	21064246	.	C	CAG	20331.22	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-15.824;DP=772;FS=3.665;HRun=0;HaplotypeScore=82.1564;InbreedingCoeff=0.9579;MQ=88.53;MQ0=0;MQRankSum=-4.999;QD=38.00;ReadPosRankSum=4.081;VQSLOD=7.2491;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,44:49:99:2056,123,0	0/0:12,0:12:33.11:0,33,420	0/0:38,1:38:23.13:0,23,764	0/0:29,0:29:53.72:0,54,650	0/0:36,0:36:84.27:0,84,1069	1/1:7,19:28:51.17:847,51,0	1/1:5,25:30:66.23:1105,66,0	1/1:8,20:29:63.20:1008,63,0	1/1:3,24:27:57.19:939,57,0	0/0:24,0:24:60.19:0,60,763	0/0:18,0:18:48.15:0,48,610	1/1:7,15:22:9.97:715,10,0	1/1:2,31:34:81.28:1354,81,0	1/1:2,31:33:87.30:1452,87,0	0/0:34,0:34:84.27:0,84,1069	1/1:7,28:35:72.25:1205,72,0	0/0:22,0:22:57.18:0,57,726	1/1:9,20:29:63.21:1038,63,0	0/0:23,0:23:57.16:0,57,701	1/1:4,20:24:54.18:904,54,0	1/1:3,37:40:93.32:1556,93,0	1/1:4,12:16:36.12:602,36,0	1/1:4,15:19:22.57:539,23,0	1/1:5,25:30:1.87:1129,2,0	1/1:0,20:20:57.19:954,57,0	1/1:4,17:21:15.96:761,16,0	1/1:4,24:28:34.07:1114,34,0	1/1:0,21:21:63.22:1054,63,0
chr10	21065089	.	TG	T	4410.90	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=12.473;DP=692;FS=5.785;HRun=3;HaplotypeScore=67.9355;InbreedingCoeff=0.9949;MQ=89.25;MQ0=0;MQRankSum=-5.188;QD=33.67;ReadPosRankSum=0.659;VQSLOD=5.3492;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,120,1707	1/1:1,7:8:18.06:223,18,0	0/0:23,0:23:62.93:0,63,856	0/0:33,0:33:93.27:0,93,1302	1/1:0,30:30:84.26:1041,84,0	0/0:23,0:23:63.20:0,63,889	0/0:23,0:23:66.21:0,66,929	0/0:35,0:35:99:0,102,1420	0/0:17,0:17:51.17:0,51,735	1/1:0,21:21:63.20:781,63,0	1/1:1,11:12:27.08:335,27,0	0/0:29,0:29:81.27:0,81,1167	0/0:34,0:34:99:0,99,1403	0/0:13,0:13:39.13:0,39,562	0/0:29,0:29:87.29:0,87,1251	0/0:22,0:22:63.21:0,63,905	1/1:0,48:48:99:1599,129,0	0/0:29,0:28:87.29:0,87,1251	1/1:0,12:12:36.09:432,36,0	0/0:25,0:25:65.89:0,66,949	0/0:34,0:34:96.28:0,96,1329	0/0:28,0:28:84.28:0,84,1206	0/0:16,0:16:45.15:0,45,644	0/0:27,0:27:78.26:0,78,1123	0/0:24,0:24:72.20:0,72,997	0/0:29,0:29:84.28:0,84,1210	0/0:23,0:22:66.20:0,66,925	0/0:5,0:5:15.05:0,15,216
chr10	21065964	.	AAAAC	A	18859.50	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=7.887;DP=711;FS=9.142;HRun=0;HaplotypeScore=150.6319;InbreedingCoeff=0.9894;MQ=62.08;MQ0=5;MQRankSum=-1.558;QD=30.32;ReadPosRankSum=3.545;VQSLOD=4.3510;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,20:26:48.16:787,48,0	1/1:3,8:11:15.05:246,15,0	0/0:18,0:15:18.06:0,18,423	0/0:31,0:23:30.60:0,31,540	1/1:4,23:27:54.09:825,54,0	1/1:7,19:26:51.17:836,51,0	1/1:5,27:32:66.05:963,66,0	1/1:23,15:38:45.06:608,45,0	1/1:8,17:25:45.12:695,45,0	1/1:5,15:20:48.13:730,48,0	1/1:7,19:26:54.05:797,54,0	1/1:6,16:22:39.13:639,39,0	1/1:10,18:28:51.14:807,51,0	1/1:4,19:23:48.16:787,48,0	0/0:38,1:39:47.15:0,47,2168	1/1:5,19:24:48.16:787,48,0	1/1:5,30:35:75.21:1229,75,0	1/1:5,24:29:51:836,51,0	1/1:6,10:16:30.10:492,30,0	1/1:9,21:30:54.11:828,54,0	1/1:4,8:12:21.07:344,21,0	1/1:12,14:26:36.12:590,36,0	1/1:5,20:25:47.83:785,48,0	1/1:5,19:24:51.13:836,51,0	1/1:7,22:29:63.22:1033,63,0	1/1:6,20:26:60.17:934,60,0	1/1:12,20:32:60:955,60,0	1/1:0,10:10:30.10:492,30,0
chr10	21066354	.	TGTGGGGGCCAGCA	T	32584.40	PASS	AB=0.947;AC=51;AF=0.911;AN=56;BaseQRankSum=9.493;DP=519;FS=12.299;HRun=0;HaplotypeScore=225.3781;InbreedingCoeff=0.7441;MQ=78.85;MQ0=0;MQRankSum=-10.861;QD=68.03;ReadPosRankSum=4.183;VQSLOD=3.3857;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,35:43:59.23:2131,59,0	1/1:0,8:8:24.08:925,24,0	0/0:21,0:21:20.30:0,20,1713	0/0:19,0:19:48.13:0,48,2338	1/1:3,13:16:18.06:532,18,0	1/1:1,21:22:54.19:2056,54,0	1/1:0,16:16:24.08:907,24,0	1/1:4,20:24:56.93:1386,57,0	1/1:0,13:13:36.12:1400,36,0	1/1:3,21:24:60.15:2127,60,0	1/1:2,15:17:27.09:941,27,0	1/1:2,23:25:66.23:2509,66,0	1/1:2,17:19:39.13:1492,39,0	1/1:0,20:20:45.15:1692,45,0	0/1:17,1:18:62.43:62,0,3077	1/1:2,20:22:51.17:1964,51,0	1/1:2,16:18:24.08:904,24,0	1/1:1,15:16:36.12:1227,36,0	1/1:3,14:17:42.05:1244,42,0	1/1:1,7:8:12.04:362,12,0	1/1:0,17:17:12.04:363,12,0	1/1:1,12:13:39.13:1458,39,0	1/1:3,12:15:30.10:1100,30,0	1/1:5,19:24:15.05:583,15,0	1/1:1,17:18:36.12:1315,36,0	1/1:1,18:19:51.09:1781,51,0	1/1:3,16:19:39.13:1424,39,0	1/1:2,6:8:18.06:700,18,0
chr10	21067193	.	C	CATTT	1110.99	PASS	AC=26;AF=0.684;AN=38;BaseQRankSum=-2.218;DP=313;FS=6.232;HRun=0;HaplotypeScore=55.4620;InbreedingCoeff=0.4864;MQ=64.63;MQ0=1;MQRankSum=-0.080;QD=7.31;ReadPosRankSum=-1.854;VQSLOD=0.7331;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:24.08:0,24,356	./.	./.	./.	0/0:9,0:9:3.01:0,3,45	1/1:9,0:11:3.01:52,3,0	./.	./.	1/1:6,3:9:6.02:138,6,0	0/0:8,0:8:6.01:0,6,72	0/0:8,0:8:3.01:0,3,45	./.	1/1:8,3:11:9.03:207,9,0	1/1:7,0:7:3.01:69,3,0	./.	1/1:4,0:5:3.01:43,3,0	0/0:18,0:30:32.96:0,33,296	1/1:26,2:28:6.02:117,6,0	1/1:17,0:17:3.01:69,3,0	0/0:5,0:5:3.01:0,3,45	./.	1/1:4,0:4:3:26,3,0	1/1:7,0:7:3.01:40,3,0	./.	1/1:10,7:17:9.03:207,9,0	1/1:8,1:11:6.02:116,6,0	1/1:7,1:8:5.98:89,6,0	1/1:14,2:16:3.01:69,3,0
chr10	21067783	.	CGGG	C	15118.34	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-4.524;DP=651;FS=3.106;HRun=10;HaplotypeScore=107.9360;InbreedingCoeff=0.9757;MQ=69.43;MQ0=0;MQRankSum=-3.694;QD=25.37;ReadPosRankSum=6.265;VQSLOD=3.2354;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,37:41:81.19:1075,81,0	1/1:3,7:10:18.06:244,18,0	0/0:17,0:15:20.61:0,21,347	0/0:21,0:20:38.07:0,38,448	1/1:3,22:25:48.03:609,48,0	1/1:1,17:18:36.12:491,36,0	1/1:7,20:27:30.07:409,30,0	1/1:2,14:16:39:505,39,0	1/1:1,18:19:39.13:524,39,0	1/1:8,24:32:69.19:923,69,0	1/1:3,8:11:21.06:286,21,0	1/1:4,22:26:42.12:572,42,0	1/1:3,19:22:36.11:491,36,0	1/1:6,18:24:42.07:572,42,0	0/0:15,0:17:45.02:0,45,633	1/1:5,28:33:63.14:831,63,0	1/1:5,31:36:69.20:941,69,0	1/1:1,35:36:84.07:1146,84,0	1/1:5,11:16:30.06:378,30,0	1/1:1,6:7:18:223,18,0	1/1:8,25:33:39.10:532,39,0	1/1:1,17:18:11.10:387,11,0	1/1:4,11:15:27.55:369,28,0	1/1:1,31:32:54.03:736,54,0	1/1:0,14:14:21.07:287,21,0	1/1:9,32:41:96.25:1237,96,0	1/1:3,25:28:63.20:859,63,0	1/1:0,16:16:36.11:491,36,0
chr10	21068504	.	T	TCTGTTTTTCTC	69005.48	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-5.772;DP=668;FS=4.401;HRun=0;HaplotypeScore=191.4639;InbreedingCoeff=0.9915;MQ=71.52;MQ0=0;MQRankSum=-11.095;QD=113.68;ReadPosRankSum=2.649;VQSLOD=5.0492;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,5:19:21.07:996,21,0	1/1:6,10:16:42.14:2172,42,0	0/0:27,0:27:63.16:0,63,1671	0/0:12,0:13:23.67:0,24,449	1/1:15,13:32:60.20:2780,60,0	1/1:5,18:27:66.23:3646,66,0	1/1:14,3:20:42.14:1896,42,0	1/1:26,7:40:99:4349,111,0	1/1:7,13:22:60.20:2855,60,0	1/1:13,14:30:81.25:3616,81,0	1/1:6,20:28:72.25:3803,72,0	1/1:12,18:32:69.16:3514,69,0	1/1:11,14:28:72.25:3473,72,0	1/1:7,21:29:72.25:3899,72,0	0/0:21,0:21:57.20:0,57,1920	1/1:8,21:29:78.27:4064,78,0	1/1:9,9:19:42.14:1679,42,0	1/1:10,6:17:27.09:1508,27,0	1/1:15,7:25:60.18:2373,60,0	1/1:13,13:27:57.20:2898,57,0	1/1:3,3:9:15.05:756,15,0	1/1:8,17:25:66.22:3459,66,0	1/1:16,9:27:54.65:2529,55,0	1/1:13,6:20:33.11:1510,33,0	1/1:8,7:17:45.15:2358,45,0	1/1:15,13:30:87.29:4006,87,0	1/1:10,14:25:61.09:3205,61,0	1/1:4,10:14:30.10:1662,30,0
chr10	21069476	.	AC	A	15496.77	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=9.301;DP=673;FS=4.613;HRun=7;HaplotypeScore=159.6120;InbreedingCoeff=0.9999;MQ=79.49;MQ0=0;MQRankSum=-7.634;QD=26.40;ReadPosRankSum=5.365;VQSLOD=2.9300;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,40:43:99:1160,114,0	1/1:0,12:12:36.08:365,36,0	0/0:29,0:25:57.97:0,58,630	0/0:27,0:24:39.71:0,40,448	1/1:4,21:25:57.03:566,57,0	1/1:2,14:16:42.05:416,42,0	1/1:3,25:28:69.15:701,69,0	1/1:3,26:29:78.17:794,78,0	1/1:2,24:26:69.15:702,69,0	1/1:0,22:22:63.14:641,63,0	1/1:1,18:19:47.90:458,48,0	1/1:2,19:21:51.11:518,51,0	1/1:3,22:25:66.09:660,66,0	1/1:1,20:21:54.12:550,54,0	0/0:29,0:29:84.27:0,84,1056	1/1:1,16:17:42.09:427,42,0	1/1:2,20:22:51.11:520,51,0	1/1:0,23:23:66.15:673,66,0	1/1:3,26:29:78.14:784,78,0	1/1:0,16:16:48.11:488,48,0	1/1:0,19:19:45.10:459,45,0	1/1:2,27:29:75.16:764,75,0	1/1:2,19:21:57.09:569,57,0	1/1:4,23:27:54.07:537,54,0	1/1:1,22:23:57.13:579,57,0	1/1:0,32:32:96.22:977,96,0	1/1:0,17:17:51.11:519,51,0	1/1:0,25:25:66.15:671,66,0
chr10	21071080	.	A	ATC	22382.24	PASS	AB=0.712;AC=36;AF=0.643;AN=56;BaseQRankSum=-8.249;DP=902;FS=1.766;HRun=0;HaplotypeScore=152.8774;InbreedingCoeff=0.6849;MQ=71.29;MQ0=1;MQRankSum=-1.619;QD=32.30;ReadPosRankSum=3.125;VQSLOD=6.8375;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,42:54:4.48:1593,4,0	0/0:10,0:10:21.07:0,21,257	0/1:22,1:17:10.58:11,0,321	0/0:35,0:33:23.43:0,23,486	0/0:29,0:29:72.23:0,72,880	1/1:7,28:36:78.27:1265,78,0	0/1:14,16:31:9.26:653,0,9	1/1:18,19:37:54.18:872,54,0	1/1:5,29:34:84.29:1363,84,0	0/0:37,0:37:87.25:0,87,1049	0/0:24,0:24:63.18:0,63,747	1/1:8,20:30:34.38:842,34,0	1/1:6,37:43:99:1694,105,0	1/1:5,32:38:90.31:1460,90,0	0/0:42,0:42:99:0,114,1354	1/1:3,35:38:96.33:1557,96,0	0/0:17,0:17:39.12:0,39,476	0/1:11,11:22:22.20:614,0,22	0/0:14,0:14:42.13:0,42,513	1/1:4,23:27:32.98:1034,33,0	1/1:10,34:45:49.68:1284,50,0	1/1:9,31:40:87.30:1410,87,0	1/1:5,28:34:81.08:1291,81,0	1/1:10,32:42:20.02:1338,20,0	0/1:7,19:26:16.12:764,0,16	1/1:9,39:47:99:1685,114,0	1/1:9,17:27:57.18:875,57,0	1/1:2,16:18:48.16:779,48,0
chr10	21071373	.	G	GT	13594.16	PASS	AB=0.969;AC=52;AF=0.929;AN=56;BaseQRankSum=-7.291;DP=544;FS=11.107;HRun=8;HaplotypeScore=55.9168;InbreedingCoeff=0.4998;MQ=79.99;MQ0=0;MQRankSum=-4.475;QD=26.19;ReadPosRankSum=2.907;VQSLOD=5.1112;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,14:15:36.11:415,36,0	1/1:1,9:10:15.04:173,15,0	0/1:21,0:19:7.76:8,0,185	0/1:14,0:12:10.83:11,0,72	1/1:1,29:30:81.06:872,81,0	1/1:2,25:27:72.21:828,72,0	1/1:2,13:15:33.10:381,33,0	1/1:7,20:27:57.16:648,57,0	1/1:1,15:16:36.11:416,36,0	1/1:0,22:22:66.13:727,66,0	1/1:2,13:15:32.97:348,33,0	1/1:3,15:19:44.96:497,45,0	1/1:1,14:16:45.13:519,45,0	1/1:2,21:23:57.17:657,57,0	0/0:25,0:25:59.98:0,60,532	1/1:2,13:15:39.12:450,39,0	1/1:2,26:28:72.21:831,72,0	1/1:1,18:19:48.14:554,48,0	1/1:5,10:15:5.63:319,6,0	1/1:4,18:22:51.10:573,51,0	1/1:0,8:8:24.07:277,24,0	1/1:0,24:25:68.95:758,69,0	1/1:0,25:25:72.13:811,72,0	1/1:0,9:9:18.05:208,18,0	1/1:2,17:19:48.14:553,48,0	1/1:5,22:27:66.20:761,66,0	1/1:4,26:30:72.21:827,72,0	1/1:1,5:6:15.04:173,15,0
chr10	21071688	.	A	AG	3992.19	PASS	AB=0.930;AC=44;AF=0.786;AN=56;BaseQRankSum=3.918;DP=480;FS=6.065;HRun=1;HaplotypeScore=247.5488;InbreedingCoeff=0.1680;MQ=57.72;MQ0=3;MQRankSum=-0.758;QD=10.42;ReadPosRankSum=7.195;VQSLOD=1.7278;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:18,2:20:31.30:197,31,0	1/1:3,1:4:9.03:113,9,0	0/0:35,0:14:22.50:0,22,243	0/0:62,0:17:10.46:0,10,220	0/1:16,2:18:25.36:190,0,25	1/1:28,0:27:69.76:357,70,0	1/1:19,0:19:23.77:190,24,0	0/1:24,0:22:11.66:282,0,12	1/1:15,0:15:33.08:195,33,0	0/1:9,0:9:12.24:42,0,12	0/1:3,1:4:1.16:38,0,1	1/1:18,0:18:41.77:248,42,0	1/1:16,0:16:33.65:131,34,0	1/1:11,0:11:27.39:127,27,0	0/1:7,0:7:33.12:33,0,39	1/1:24,0:24:51.95:285,52,0	0/1:9,3:12:26.91:97,0,27	1/1:9,2:9:4.29:62,4,0	0/1:15,0:14:5.60:136,0,6	1/1:14,0:14:32.93:168,33,0	0/1:15,1:16:0.62:98,0,1	1/1:8,0:8:21.57:98,22,0	1/1:12,0:12:15.66:122,16,0	1/1:18,1:19:33.79:202,34,0	1/1:15,0:15:6.07:148,6,0	1/1:10,1:10:12.58:96,13,0	1/1:24,1:25:37.39:266,37,0	1/1:8,0:8:19.77:71,20,0
chr10	21071689	.	GAA	G	11972.92	PASS	AB=0.746;AC=45;AF=0.804;AN=56;BaseQRankSum=1.144;DP=474;FS=1.139;HRun=2;HaplotypeScore=220.2861;InbreedingCoeff=0.3509;MQ=57.94;MQ0=5;MQRankSum=-0.747;QD=32.19;ReadPosRankSum=1.685;VQSLOD=4.7333;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:11,8:21:5.43:415,0,5	1/1:1,3:4:9.02:112,9,0	0/0:33,1:14:21.53:0,22,273	0/0:58,1:15:21.67:0,22,302	1/1:10,8:18:1.61:400,2,0	1/1:5,21:27:72.89:1104,73,0	1/1:4,14:19:50.49:681,50,0	0/1:6,13:22:44.65:503,0,45	1/1:2,12:14:42.01:585,42,0	1/1:4,4:8:3.90:232,4,0	1/1:2,2:4:1.42:75,1,0	1/1:6,12:18:48.12:702,48,0	1/1:1,15:16:45.12:686,45,0	1/1:1,10:11:33.07:502,33,0	0/0:7,0:7:10.20:0,10,62	1/1:7,16:23:60.12:872,60,0	0/1:11,1:12:33.68:182,0,34	0/1:7,3:9:1.88:114,0,2	1/1:6,9:14:4.35:429,4,0	1/1:0,12:14:36.12:582,36,0	0/1:10,5:16:22.94:225,0,23	1/1:1,7:8:24.07:364,24,0	1/1:0,12:12:33.03:502,33,0	1/1:7,7:18:18.84:438,19,0	1/1:4,11:15:41.96:533,42,0	1/1:3,8:10:30.03:433,30,0	1/1:3,21:24:69.08:1021,69,0	1/1:2,6:8:10.87:281,11,0
chr10	21071691	.	A	AG	4811.99	PASS	AB=0.896;AC=49;AF=0.875;AN=56;BaseQRankSum=1.725;DP=460;FS=0.810;HRun=1;HaplotypeScore=250.5207;InbreedingCoeff=0.4869;MQ=57.81;MQ0=5;MQRankSum=-0.273;QD=13.01;ReadPosRankSum=5.953;VQSLOD=4.1320;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:16,6:22:50.71:517,51,0	1/1:4,0:4:9.03:115,9,0	0/0:33,0:13:12.84:0,13,167	0/0:52,3:15:17.05:0,17,162	1/1:15,0:15:0.74:185,1,0	1/1:28,0:27:60.22:280,60,0	1/1:19,1:20:25.16:217,25,0	1/1:18,0:17:43.63:319,44,0	1/1:14,0:14:30.60:158,31,0	0/1:7,1:8:4.91:82,0,5	0/1:3,1:4:5.50:57,0,6	1/1:17,0:17:33.78:169,34,0	1/1:16,0:16:34.45:149,34,0	1/1:12,0:12:33.10:166,33,0	1/1:4,4:8:14.94:193,15,0	1/1:23,0:23:50.50:252,51,0	1/1:6,5:11:22.25:230,22,0	1/1:8,2:8:13.72:118,14,0	1/1:14,1:14:34.71:254,35,0	1/1:14,0:14:32.66:166,33,0	1/1:8,7:15:21.98:221,22,0	1/1:8,0:8:17.68:66,18,0	1/1:12,0:12:13.34:112,13,0	1/1:15,2:17:32.88:195,33,0	0/1:13,0:13:3.42:102,0,3	1/1:11,0:10:8.43:68,8,0	1/1:27,0:27:38.72:275,39,0	1/1:6,2:8:21:146,21,0
chr10	21071698	.	GC	G	10349.17	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=1.986;DP=393;FS=15.577;HRun=1;HaplotypeScore=212.5594;InbreedingCoeff=0.7974;MQ=61.90;MQ0=5;MQRankSum=-4.141;QD=31.84;ReadPosRankSum=3.788;VQSLOD=1.9362;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,18:21:50.65:631,51,0	1/1:0,3:3:6.02:73,6,0	0/0:24,2:12:5.06:0,5,218	0/0:36,3:16:29.51:0,30,239	1/1:0,9:9:18.05:226,18,0	1/1:0,26:25:75.19:913,75,0	1/1:1,15:16:42.51:481,43,0	1/1:4,12:14:36.91:359,37,0	1/1:1,12:13:38.78:440,39,0	1/1:0,6:7:20.43:258,20,0	1/1:0,3:3:6.02:79,6,0	1/1:0,16:16:45.14:542,45,0	1/1:0,16:16:45.13:533,45,0	1/1:0,13:13:39.08:471,39,0	1/1:1,4:5:11.71:163,12,0	1/1:1,19:20:60.18:719,60,0	1/1:1,5:6:18.05:237,18,0	1/1:1,4:5:14.40:139,14,0	1/1:0,12:12:36.12:502,36,0	1/1:1,12:13:34.75:385,35,0	1/1:0,12:12:17.83:294,18,0	1/1:0,8:8:21.06:251,21,0	1/1:0,13:13:33.10:405,33,0	1/1:1,13:14:26.35:330,26,0	1/1:1,11:12:32.98:370,33,0	1/1:0,12:11:33.10:401,33,0	1/1:0,26:26:72.16:840,72,0	1/1:0,8:8:24.08:307,24,0
chr10	21071715	.	AG	A	8747.02	PASS	AB=0.579;AC=51;AF=0.911;AN=56;BaseQRankSum=-0.819;DP=444;FS=28.753;HRun=6;HaplotypeScore=214.0888;InbreedingCoeff=0.5270;MQ=60.81;MQ0=12;MQRankSum=-2.188;QD=23.39;ReadPosRankSum=2.665;VQSLOD=1.5638;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,18:24:47.65:417,48,0	1/1:0,2:2:3.01:32,3,0	0/0:24,2:8:1.44:0,1,42	0/0:42,1:19:21.96:0,22,152	1/1:1,9:10:24.06:257,24,0	1/1:2,31:32:87.17:918,87,0	1/1:3,14:17:40.76:412,41,0	1/1:5,5:5:5.38:40,5,0	1/1:2,12:14:36.09:386,36,0	0/1:3,8:11:8.06:230,0,8	1/1:2,5:7:17.26:168,17,0	1/1:1,20:20:60.15:641,60,0	1/1:2,21:21:60.10:625,60,0	1/1:1,16:17:45.04:459,45,0	1/1:2,6:8:5.82:64,6,0	1/1:2,18:21:53.45:538,53,0	1/1:3,5:9:9.02:94,9,0	1/1:2,4:4:11.77:106,12,0	1/1:1,10:12:32.92:331,33,0	1/1:3,7:10:23.08:225,23,0	1/1:3,9:13:11.72:154,12,0	1/1:1,8:9:24.06:257,24,0	1/1:2,12:14:32.97:323,33,0	1/1:3,15:18:24.97:273,25,0	1/1:2,10:11:27.07:287,27,0	1/1:2,15:16:48.12:510,48,0	1/1:1,25:26:75.18:804,75,0	1/1:3,6:9:18.04:193,18,0
chr10	21072329	.	CCA	C	1541.09	PASS	AB=1.000;AC=30;AF=0.536;AN=56;BaseQRankSum=-2.876;DP=434;FS=14.333;HRun=0;HaplotypeScore=95.4878;InbreedingCoeff=-0.0119;MQ=88.35;MQ0=0;MQRankSum=-1.965;QD=4.55;ReadPosRankSum=-1.194;VQSLOD=1.6641;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:0.80:0,1,165	1/1:4,0:4:7.24:25,7,0	0/0:12,0:12:24.17:0,24,324	0/0:22,0:22:50.60:0,51,646	1/1:26,0:26:28.43:178,28,0	0/1:17,0:17:17.02:17,0,127	0/1:11,0:11:5.72:6,0,113	0/1:13,0:13:52.20:63,0,52	0/1:16,0:16:58.89:59,0,131	1/1:25,0:25:58.99:290,59,0	1/1:17,0:17:27.72:121,28,0	0/0:8,0:8:14.78:0,15,96	0/1:16,0:16:52.50:52,0,168	0/1:13,0:13:16.87:17,0,157	0/0:28,0:28:84.10:0,84,1314	0/1:10,0:10:22.73:23,0,123	1/1:13,1:14:29.84:135,30,0	0/1:18,0:18:53.63:54,0,146	1/1:13,2:15:32.60:205,33,0	0/1:18,0:18:68.50:69,0,124	0/1:11,0:11:6.25:6,0,80	0/1:16,0:16:5.43:5,0,146	1/1:13,0:13:25.50:105,25,0	1/1:17,1:18:27.34:127,27,0	0/1:17,0:17:11.53:12,0,131	0/1:15,0:15:72.81:136,0,73	0/1:16,0:16:16.86:17,0,138	0/0:10,0:10:5.79:0,6,74
chr10	21072330	.	CA	C	5533.92	PASS	AB=0.977;AC=37;AF=0.661;AN=56;BaseQRankSum=-7.688;DP=423;FS=5.482;HRun=1;HaplotypeScore=72.9710;InbreedingCoeff=-0.0072;MQ=89.01;MQ0=0;MQRankSum=-3.955;QD=15.33;ReadPosRankSum=-4.784;VQSLOD=2.8257;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:14,1:15:20.97:53,0,21	1/1:0,4:4:9.03:125,9,0	0/0:12,0:12:13.37:0,13,226	0/0:22,0:22:59.71:0,60,638	1/1:1,23:24:49.66:675,50,0	0/1:16,0:16:13.10:120,0,13	0/1:11,0:11:11.02:60,0,11	1/1:13,0:13:16.36:161,16,0	0/1:13,2:15:4.22:164,0,4	1/1:1,22:23:69.09:824,69,0	1/1:0,17:17:32.72:419,33,0	0/1:8,0:8:4.83:19,0,5	0/1:15,1:16:9.60:94,0,10	0/1:13,0:13:7.81:74,0,8	0/0:28,0:28:78.99:0,79,1057	0/1:10,0:10:11.32:37,0,11	1/1:1,13:14:36.01:474,36,0	0/1:18,0:18:3.41:133,0,3	1/1:2,12:14:41.96:458,42,0	0/1:18,0:18:3.57:142,0,4	0/1:11,0:11:8.93:44,0,9	0/1:14,0:14:16.60:43,0,17	1/1:0,13:13:29.97:411,30,0	1/1:1,16:17:33.47:433,33,0	1/1:14,2:16:2.27:198,2,0	1/1:16,0:16:3.74:190,4,0	0/1:15,1:16:10.29:78,0,10	1/1:8,1:9:2.02:103,2,0
chr10	21073852	.	TTGTGTGTGTG	T	621.76	PASS	AB=1.000;AC=7;AF=0.135;AN=52;BaseQRankSum=0.475;DP=535;FS=23.275;HRun=0;HaplotypeScore=166.1749;InbreedingCoeff=0.6115;MQ=65.88;MQ0=17;MQRankSum=0.542;QD=9.87;ReadPosRankSum=-0.173;VQSLOD=0.7088;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:24.06:0,24,924	1/1:2,2:4:8.99:191,9,0	./.	0/0:51,0:28:14.99:0,15,370	0/0:11,0:14:0.41:0,0,1	0/0:13,0:22:14.81:0,15,468	0/0:28,0:27:24.46:0,24,678	0/0:19,0:18:20.43:0,20,394	0/0:13,0:11:5.50:0,5,213	1/1:17,0:18:3:57,3,0	./.	0/0:13,0:13:11.74:0,12,410	0/0:12,0:12:14.99:0,15,465	0/0:22,0:22:18.02:0,18,551	0/0:23,0:23:33.11:0,33,1197	0/0:18,0:16:16.56:0,17,641	0/1:24,0:24:51.18:239,0,51	0/0:11,0:10:15.05:0,15,597	1/1:15,2:17:9.03:260,9,0	0/0:13,0:13:18.05:0,18,633	0/0:19,0:17:15.41:0,15,362	0/0:12,0:12:9.02:0,9,185	0/0:19,0:19:8.85:0,9,317	0/0:16,0:16:15.05:0,15,535	0/0:19,0:17:26.03:0,26,924	0/0:28,0:27:30.10:0,30,1189	0/0:20,0:20:18.06:0,18,672	0/0:11,0:10:27.07:0,27,661
chr10	21074615	.	AAAAC	A	11080.08	PASS	AB=0.620;AC=37;AF=0.661;AN=56;BaseQRankSum=7.152;DP=720;FS=0.421;HRun=0;HaplotypeScore=140.7429;InbreedingCoeff=0.8403;MQ=69.06;MQ0=5;MQRankSum=0.049;QD=21.43;ReadPosRankSum=1.966;VQSLOD=4.2312;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:22,27:49:58.44:950,58,0	0/0:12,0:12:30.09:0,30,559	0/0:23,0:18:6.02:0,6,117	0/0:27,0:22:21.07:0,21,448	0/0:19,0:19:36.09:0,36,801	1/1:8,18:26:30.10:477,30,0	1/1:16,19:35:42.14:667,42,0	1/1:20,8:28:24.03:320,24,0	1/1:5,14:19:33.11:524,33,0	0/0:21,0:21:48.15:0,48,1046	0/0:16,0:16:24.08:0,24,545	1/1:14,27:41:69.24:1096,69,0	1/1:11,20:31:46.86:761,47,0	1/1:20,24:44:49.41:766,49,0	0/0:12,0:33:60.21:0,60,1090	1/1:8,12:19:24.08:381,24,0	0/0:24,2:26:0.44:0,0,910	1/1:9,16:25:39.13:600,39,0	0/0:26,0:26:46.29:0,46,1013	1/1:13,10:23:27.09:429,27,0	1/1:9,17:26:36.12:572,36,0	1/1:7,10:17:21.03:333,21,0	1/1:13,12:25:24.08:381,24,0	1/1:9,27:35:74.79:1191,75,0	1/1:5,12:17:24.08:381,24,0	0/1:12,19:31:11.50:774,0,11	1/1:6,11:17:27.09:429,27,0	1/1:5,1:6:3.01:48,3,0
chr10	21076530	.	AC	A	14842.88	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=4.144;DP=714;FS=1.104;HRun=8;HaplotypeScore=88.8713;InbreedingCoeff=0.9971;MQ=74.48;MQ0=0;MQRankSum=-3.517;QD=22.91;ReadPosRankSum=3.800;VQSLOD=5.2897;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,43:54:80.55:960,81,0	1/1:1,15:16:39.06:377,39,0	0/0:17,0:16:36.10:0,36,419	0/0:16,0:16:18.65:0,19,228	1/1:1,32:33:78.06:739,78,0	1/1:0,23:23:66.11:637,66,0	1/1:3,22:25:39.06:377,39,0	1/1:3,22:25:63.04:590,63,0	1/1:3,27:30:75.12:724,75,0	1/1:1,33:34:96.13:921,96,0	1/1:2,14:16:47.97:442,48,0	1/1:2,31:33:69.11:666,69,0	1/1:1,26:27:68.88:666,69,0	1/1:2,28:30:62.64:608,63,0	0/0:33,0:33:99:0,99,1143	1/1:2,19:21:54.09:521,54,0	1/1:0,17:18:41.10:383,41,0	1/1:4,11:15:30.04:290,30,0	1/1:3,15:18:41.04:413,41,0	1/1:2,24:26:63:588,63,0	1/1:0,31:31:84.14:811,84,0	1/1:2,19:21:57.03:539,57,0	1/1:0,23:23:57.09:550,57,0	1/1:1,24:25:63.10:608,63,0	1/1:2,15:17:42.07:406,42,0	1/1:2,32:34:96.15:927,96,0	1/1:4,30:34:78.12:753,78,0	1/1:5,14:19:36.05:348,36,0
chr10	21076841	.	T	TC	437.43	PASS	AB=1.000;AC=25;AF=0.893;AN=28;BaseQRankSum=-1.843;DP=40;FS=6.043;HRun=0;HaplotypeScore=13.8644;InbreedingCoeff=0.0094;MQ=99.93;MQ0=3;MQRankSum=-3.071;QD=12.15;ReadPosRankSum=-1.370;VQSLOD=2.5619;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,0:1:3.01:46,3,0	1/1:1,0:1:3:25,3,0	0/0:3,0:1:2.98:0,3,22	0/1:14,0:6:11.04:11,0,50	./.	./.	./.	./.	1/1:1,0:1:3:25,3,0	1/1:1,0:1:3:28,3,0	./.	1/1:3,0:3:6.02:73,6,0	./.	./.	./.	1/1:0,4:4:2.97:29,3,0	./.	./.	./.	1/1:2,0:2:3.01:34,3,0	./.	1/1:2,0:2:6.02:80,6,0	1/1:1,0:1:3.01:40,3,0	./.	1/1:1,0:1:3.01:46,3,0	./.	1/1:3,0:3:6.01:60,6,0	1/1:0,2:2:3.01:30,3,0
chr10	21078008	.	ATG	A	154.61	PASS	AB=0.927;AC=8;AF=0.143;AN=56;BaseQRankSum=3.385;DP=986;FS=5.347;HRun=0;HaplotypeScore=273.6760;InbreedingCoeff=0.0353;MQ=43.23;MQ0=65;MQRankSum=-3.050;QD=0.62;ReadPosRankSum=-7.626;VQSLOD=0.5416;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:37,1:35:38.11:38,0,653	0/0:13,0:13:21.02:0,21,235	1/1:57,5:1:3.01:49,3,0	0/1:47,5:10:69.47:69,0,259	0/0:23,3:25:42.11:0,42,523	0/0:13,0:12:10.56:0,11,167	0/0:24,1:20:41.11:0,41,505	0/0:30,1:19:44.47:0,44,652	0/0:34,0:32:60.27:0,60,1021	0/1:35,5:36:34.28:34,0,627	0/0:16,2:16:13.80:0,14,166	0/0:30,0:29:58.30:0,58,851	0/0:45,0:44:73.08:0,73,1133	0/0:47,0:42:60.14:0,60,1025	0/0:34,0:34:89.32:0,89,1723	0/0:31,0:28:54.06:0,54,652	0/0:30,1:28:32.44:0,32,700	0/1:23,4:25:61.77:62,0,533	0/1:19,1:12:22.66:23,0,146	0/0:23,4:25:30.13:0,30,318	0/0:127,11:125:99:0,212,2589	0/0:25,6:31:31.56:0,32,379	0/0:21,4:23:22.46:0,22,295	0/0:51,5:55:57.47:0,57,997	0/0:25,6:30:11.21:0,11,360	0/0:33,0:21:50.72:0,51,666	0/0:15,0:12:14.91:0,15,299	0/1:10,0:10:11.48:11,0,235
chr10	21078010	.	G	GCA	17303.90	PASS	AB=0.824;AC=48;AF=0.857;AN=56;BaseQRankSum=1.869;DP=975;FS=10.458;HRun=0;HaplotypeScore=223.3462;InbreedingCoeff=0.6375;MQ=44.46;MQ0=61;MQRankSum=1.811;QD=20.95;ReadPosRankSum=4.062;VQSLOD=3.9253;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:34,4:34:46.80:996,47,0	0/1:11,2:13:19.78:216,0,20	0/0:62,0:2:3.93:0,4,13	0/0:54,0:12:22.92:0,23,254	1/1:27,1:27:35.33:557,35,0	1/1:11,2:12:15.05:236,15,0	1/1:20,3:18:35.82:573,36,0	0/1:23,9:20:6.56:339,0,7	1/1:31,3:32:57.01:718,57,0	1/1:32,8:36:34.35:988,34,0	1/1:16,1:15:14.51:241,15,0	1/1:26,4:29:24.57:829,25,0	1/1:36,8:42:14.30:1035,14,0	1/1:33,13:41:32:889,32,0	0/0:33,0:33:81.23:0,81,1014	1/1:26,5:29:40.64:615,41,0	1/1:28,4:29:60.20:958,60,0	1/1:23,3:24:47.31:686,47,0	1/1:14,4:11:18.04:265,18,0	1/1:26,1:26:29.96:488,30,0	1/1:116,12:118:99:2802,171,0	1/1:33,2:35:33.53:519,34,0	1/1:23,3:24:29.86:481,30,0	1/1:49,6:54:63.87:1263,64,0	1/1:29,2:30:32.99:547,33,0	1/1:28,5:22:48.16:711,48,0	1/1:13,2:12:18.06:280,18,0	1/1:7,0:7:5.99:72,6,0
chr10	21078020	.	ATG	A	7086.71	PASS	AB=0.943;AC=46;AF=0.821;AN=56;BaseQRankSum=9.074;DP=943;FS=11.618;HRun=0;HaplotypeScore=250.7820;InbreedingCoeff=0.3426;MQ=47.35;MQ0=32;MQRankSum=4.687;QD=9.04;ReadPosRankSum=8.566;VQSLOD=2.3600;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:34,2:33:48.69:549,49,0	1/1:12,1:12:14.48:104,14,0	0/0:60,5:5:6.96:0,7,146	0/0:52,7:20:0.95:0,1,525	1/1:26,1:26:17.22:236,17,0	1/1:11,2:12:2.13:55,2,0	0/1:25,2:23:5.05:263,0,5	0/1:25,0:17:57.38:57,0,97	1/1:24,4:28:43.44:283,43,0	0/1:38,3:38:57.50:319,0,57	1/1:14,2:16:5.26:86,5,0	1/1:28,4:31:18.44:243,18,0	1/1:39,5:42:8.81:275,9,0	1/1:42,2:39:33.16:405,33,0	0/0:35,0:35:56.10:0,56,1591	1/1:23,3:24:28.44:277,28,0	1/1:29,1:28:53.08:407,53,0	1/1:19,5:21:36.38:299,36,0	0/1:16,1:11:9:73,0,9	1/1:26,2:25:19.44:232,19,0	1/1:106,11:106:66.44:1190,66,0	1/1:34,2:36:6.25:264,6,0	1/1:20,3:21:22.20:170,22,0	1/1:53,2:53:76.81:648,77,0	1/1:27,3:30:34.44:281,34,0	1/1:26,3:22:9.72:171,10,0	1/1:12,3:12:12.75:113,13,0	1/1:7,0:7:8.99:86,9,0
chr10	21078022	.	GCA	G	11364.65	PASS	AB=1.000;AC=51;AF=0.911;AN=56;BaseQRankSum=4.588;DP=933;FS=16.070;HRun=0;HaplotypeScore=231.5646;InbreedingCoeff=0.7848;MQ=47.55;MQ0=33;MQRankSum=2.517;QD=13.63;ReadPosRankSum=4.259;VQSLOD=3.2185;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:30,6:33:72.16:840,72,0	1/1:10,3:12:11.94:119,12,0	0/1:64,0:5:1.50:2,0,136	0/0:62,0:21:40.65:0,41,547	1/1:24,2:25:25.24:326,25,0	1/1:14,1:14:14.98:169,15,0	1/1:19,5:21:39.07:463,39,0	1/1:9,17:16:7.51:319,8,0	1/1:21,5:26:51.85:456,52,0	1/1:31,10:38:37.51:682,38,0	1/1:16,1:17:12.83:141,13,0	1/1:30,4:33:50.70:470,51,0	1/1:35,7:40:55.83:553,56,0	1/1:33,11:39:56.37:616,56,0	0/0:36,1:37:48.33:0,48,1280	1/1:17,7:22:32.82:331,33,0	1/1:27,5:31:31.82:613,32,0	1/1:22,2:22:35.40:357,35,0	1/1:10,4:9:15:176,15,0	1/1:25,3:25:32.98:378,33,0	1/1:96,18:103:99:1695,103,0	1/1:26,10:36:45.45:499,45,0	1/1:21,3:22:18.02:205,18,0	1/1:46,7:52:90.53:964,91,0	1/1:29,1:30:25.10:298,25,0	1/1:21,7:21:42.04:445,42,0	1/1:9,6:12:17.42:176,17,0	1/1:2,0:2:6.02:70,6,0
chr10	21078163	.	AC	A	5742.11	PASS	AB=0.624;AC=43;AF=0.768;AN=56;BaseQRankSum=4.836;DP=665;FS=3.807;HRun=2;HaplotypeScore=181.8527;InbreedingCoeff=0.2946;MQ=29.80;MQ0=102;MQRankSum=-5.070;QD=10.69;ReadPosRankSum=1.650;VQSLOD=3.3412;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,19:16:7:75,7,0	0/1:4,8:9:3:157,0,3	0/0:30,0:3:9.02:0,9,100	0/0:50,0:13:24.08:0,24,285	0/0:6,9:12:0.14:0,0,0	1/1:6,12:13:12.04:154,12,0	1/1:6,18:18:22.58:298,23,0	0/1:7,22:18:32.75:522,0,33	1/1:11,8:15:26.79:242,27,0	0/1:13,24:24:33.07:583,0,33	1/1:5,13:13:6.02:75,6,0	1/1:4,17:16:17.04:175,17,0	1/1:7,25:22:51.01:540,51,0	1/1:8,18:20:35.75:375,36,0	0/0:32,0:31:85.82:0,86,1198	1/1:4,20:19:34.44:424,34,0	1/1:6,12:16:15.81:267,16,0	1/1:8,10:14:31.88:378,32,0	0/1:10,4:11:20.30:83,0,20	1/1:3,21:17:2.45:36,2,0	1/1:20,28:28:5.28:163,5,0	1/1:4,17:15:3.01:39,3,0	1/1:3,16:12:2.74:25,3,0	0/1:6,20:19:15.79:103,0,16	1/1:4,10:12:0.93:103,1,0	1/1:5,18:17:23.83:495,24,0	1/1:1,11:11:27.01:297,27,0	1/1:3,8:7:12.49:134,12,0
chr10	21078164	.	C	CA	5448.74	PASS	AB=0.942;AC=44;AF=0.786;AN=56;BaseQRankSum=5.118;DP=688;FS=3.782;HRun=1;HaplotypeScore=203.1600;InbreedingCoeff=0.3328;MQ=29.68;MQ0=100;MQRankSum=-4.928;QD=9.44;ReadPosRankSum=1.654;VQSLOD=2.7563;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:23,4:16:3.59:74,0,4	1/1:12,0:9:15.92:177,16,0	0/0:29,1:3:9.02:0,9,101	0/0:47,1:14:29.06:0,29,296	0/1:13,2:12:0.02:0,0,0	1/1:19,1:15:11.87:129,12,0	1/1:22,3:19:21.62:269,22,0	0/1:31,0:20:33.56:516,0,34	1/1:10,10:16:27.62:242,28,0	0/1:39,1:27:13.54:612,0,14	1/1:16,2:13:6.02:75,6,0	1/1:21,1:16:9.21:139,9,0	1/1:29,4:23:47.84:480,48,0	1/1:25,2:23:33.53:312,34,0	0/0:32,0:31:85.82:0,86,1145	1/1:22,2:19:33.22:398,33,0	1/1:21,0:17:32.04:307,32,0	1/1:18,0:14:32.51:342,33,0	0/1:11,0:10:18.31:91,0,18	1/1:26,0:18:2.76:36,3,0	1/1:49,1:31:10.22:149,10,0	1/1:21,1:16:3.01:39,3,0	1/1:19,0:12:2.75:32,3,0	0/1:28,0:21:21.87:79,0,22	1/1:14,0:12:10.27:117,10,0	1/1:25,2:20:27.29:467,27,0	1/1:13,0:12:26:228,26,0	1/1:11,0:7:14.75:137,15,0
chr10	21078174	.	ACACACACACACC	A	2202	PASS	AB=0.995;AC=23;AF=0.426;AN=54;BaseQRankSum=10.213;DP=665;FS=16.150;HRun=0;HaplotypeScore=271.2294;InbreedingCoeff=-0.1149;MQ=31.87;MQ0=82;MQRankSum=-6.059;QD=5.98;ReadPosRankSum=7.641;VQSLOD=0.4909;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:17:1.12:17,1,0	1/1:11,1:9:14.26:100,14,0	0/0:33,0:14:42.14:0,42,983	0/0:45,0:19:56.81:0,57,1316	1/1:12,1:11:0.07:0,0,0	0/1:20,0:15:4.55:5,0,47	0/1:26,0:20:49.40:72,0,49	0/0:29,0:19:4.72:0,5,316	0/1:21,0:17:81.21:177,0,81	0/1:34,1:25:29.43:421,0,29	./.	0/1:22,0:16:42.16:42,0,53	0/1:28,1:21:73.22:286,0,73	0/1:28,0:23:25.43:142,0,25	0/0:32,0:31:84.29:0,84,4044	0/1:20,0:17:40.03:40,0,116	1/1:18,2:16:21.96:351,22,0	1/1:15,1:12:16.38:299,16,0	0/1:13,0:12:66.59:67,0,110	0/0:28,0:20:3.59:0,4,17	0/0:46,0:29:7.87:0,8,36	0/0:23,0:17:4.41:0,4,28	0/0:19,0:12:0.47:0,0,1	0/0:27,0:21:2.07:0,2,10	0/1:13,0:11:3.18:16,0,3	0/1:27,0:22:99:235,0,137	0/1:14,0:12:42.98:43,0,67	0/1:11,0:7:30.49:45,0,30
chr10	21078176	.	ACACACACACC	A	3467.19	PASS	AB=0.975;AC=32;AF=0.593;AN=54;BaseQRankSum=9.806;DP=659;FS=3.937;HRun=0;HaplotypeScore=262.3796;InbreedingCoeff=-0.0345;MQ=40.18;MQ0=74;MQRankSum=-5.659;QD=6.83;ReadPosRankSum=4.840;VQSLOD=1.9466;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:17:4.70:66,5,0	1/1:11,0:9:5:48,5,0	0/0:34,0:15:45.15:0,45,996	0/0:48,0:24:61.94:0,62,1372	0/1:13,0:12:0.02:0,0,0	1/1:19,0:15:12.95:59,13,0	0/1:25,0:19:21.14:169,0,21	0/1:26,0:18:59.80:60,0,176	0/1:16,2:16:36.54:279,0,37	0/1:34,0:26:16.40:281,0,16	./.	1/1:22,0:16:8.87:139,9,0	0/1:25,2:21:14.81:470,0,15	0/1:27,1:24:8.48:294,0,8	0/0:31,0:30:84.29:0,84,3693	1/1:21,0:18:1.35:192,1,0	0/1:20,1:17:15.51:231,0,16	1/1:16,0:12:21.96:323,22,0	0/1:13,0:11:74.80:75,0,91	1/1:28,0:20:1.67:6,2,0	0/1:43,0:29:4.13:5,0,4	0/0:24,0:19:0.30:0,0,1	0/1:19,0:12:0:0,0,0	1/1:27,0:21:4.96:41,5,0	1/1:13,0:11:11.86:93,12,0	0/1:27,1:23:49.46:445,0,49	0/1:13,1:12:1.33:132,0,1	0/1:12,0:9:6.60:60,0,7
chr10	21078178	.	ACACACACC	A	3890.19	PASS	AB=0.947;AC=38;AF=0.704;AN=54;BaseQRankSum=8.839;DP=652;FS=1.107;HRun=0;HaplotypeScore=253.4667;InbreedingCoeff=0.0798;MQ=42.87;MQ0=66;MQRankSum=-7.868;QD=7.44;ReadPosRankSum=1.269;VQSLOD=2.2942;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:22,5:19:4.63:39,5,0	0/1:11,0:9:19.55:28,0,20	0/0:34,0:16:48.09:0,48,964	0/0:48,0:25:63.05:0,63,1262	1/1:13,0:12:0.22:0,0,0	1/1:16,2:14:14.74:95,15,0	1/1:22,4:21:21.07:272,21,0	0/1:30,0:22:99:162,0,110	0/1:14,3:15:12.63:284,0,13	0/1:33,0:26:46.22:203,0,46	./.	1/1:17,4:16:20.64:200,21,0	0/1:22,4:21:4.67:513,0,5	1/1:22,6:24:6.25:346,6,0	0/0:32,0:31:87.27:0,87,3151	1/1:12,8:18:21.70:295,22,0	0/1:20,0:16:50.93:162,0,51	1/1:15,0:11:21:295,21,0	0/1:12,0:10:39.25:62,0,39	1/1:24,4:20:2.18:15,2,0	1/1:40,1:28:4.01:25,4,0	1/1:22,2:19:1.63:8,2,0	0/1:16,3:12:0:0,0,0	1/1:22,4:20:5.81:60,6,0	1/1:13,1:12:11.95:116,12,0	0/1:27,1:23:16.08:484,0,16	1/1:12,2:12:1.42:185,1,0	0/1:11,1:9:4.11:38,0,4
chr10	21078190	.	ATAC	A	749.35	PASS	AB=0.963;AC=18;AF=0.346;AN=52;BaseQRankSum=6.707;DP=456;FS=12.384;HRun=0;HaplotypeScore=209.7694;InbreedingCoeff=0.0768;MQ=70.20;MQ0=8;MQRankSum=-6.443;QD=4.12;ReadPosRankSum=6.423;VQSLOD=1.0931;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:13:5.74:32,6,0	1/1:4,0:4:8.84:65,9,0	0/0:42,0:25:72.72:0,73,1750	0/0:54,0:34:96.28:0,96,2168	0/0:4,2:6:0.03:0,0,0	0/0:11,0:11:5.84:0,6,35	0/0:17,0:17:7.24:0,7,50	0/0:22,0:16:25.27:0,25,281	1/1:9,0:9:2.68:119,3,0	0/1:15,3:17:99:192,0,135	./.	0/1:13,0:13:11.01:14,0,11	0/1:19,0:19:23.44:75,0,23	0/1:20,0:20:21.50:22,0,38	0/0:31,0:31:90.28:0,90,2028	0/0:13,0:12:8.70:0,9,29	0/1:14,2:14:35.94:111,0,36	1/1:8,1:9:4.38:87,4,0	0/1:7,1:7:24.34:24,0,56	0/0:15,0:11:2.04:0,2,6	0/0:18,0:17:1.14:0,1,4	0/1:16,0:14:0:0,0,0	./.	0/0:15,0:14:0.47:0,0,1	0/1:9,0:8:2.92:28,0,3	0/1:18,0:18:55.88:56,0,161	0/0:11,0:10:8.55:0,9,28	0/1:9,0:7:6.82:69,0,7
chr10	21078195	.	ACTAGAGCAC	A	14188.87	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=12.200;DP=443;FS=7.405;HRun=0;HaplotypeScore=191.1719;InbreedingCoeff=0.7473;MQ=80.05;MQ0=6;MQRankSum=-11.781;QD=43.00;ReadPosRankSum=1.127;VQSLOD=3.8541;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,11:11:27.08:381,27,0	1/1:0,4:4:9.03:283,9,0	0/0:39,0:31:85.71:0,86,3977	0/0:49,0:36:97.57:0,98,4542	1/1:2,4:6:0.21:0,0,0	1/1:1,13:14:18.06:332,18,0	1/1:0,18:18:36.12:834,36,0	1/1:2,18:14:42.14:1328,42,0	1/1:0,8:8:24.08:679,24,0	1/1:5,13:16:42.14:1265,42,0	1/1:0,11:11:3.01:34,3,0	1/1:2,13:15:27.56:599,28,0	1/1:0,20:20:51.17:1461,51,0	1/1:3,18:20:33.11:865,33,0	0/0:25,0:25:75.26:0,75,3613	1/1:0,13:12:33.11:687,33,0	1/1:6,10:14:30.10:742,30,0	1/1:5,4:9:24.08:740,24,0	1/1:1,7:7:18.06:563,18,0	1/1:1,14:11:9.03:164,9,0	1/1:9,8:16:3.88:126,4,0	1/1:2,14:14:5.95:72,6,0	1/1:3,5:7:9.03:164,9,0	1/1:6,9:14:5.17:129,5,0	1/1:1,8:8:15.05:328,15,0	1/1:1,16:17:45.15:1390,45,0	1/1:0,11:10:20.87:530,21,0	1/1:2,7:7:21.07:493,21,0
chr10	21078196	.	CT	C	1830.43	PASS	AB=0.889;AC=45;AF=0.833;AN=54;BaseQRankSum=12.596;DP=423;FS=1.117;HRun=1;HaplotypeScore=193.8078;InbreedingCoeff=0.6455;MQ=82.77;MQ0=6;MQRankSum=-11.583;QD=6.18;ReadPosRankSum=5.178;VQSLOD=0.7198;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,1:11:2.90:16,3,0	1/1:4,0:4:8.38:42,8,0	0/0:38,1:32:53.21:0,53,1396	0/0:45,1:36:94.98:0,95,1515	0/0:4,2:6:0.40:0,0,1	1/1:14,0:14:5.36:22,5,0	1/1:18,0:18:19.24:92,19,0	1/1:18,0:14:37.62:155,38,0	1/1:8,0:8:19.80:122,20,0	1/1:14,3:15:39.47:239,39,0	./.	1/1:13,2:15:13.87:67,14,0	1/1:20,0:20:41.62:225,42,0	1/1:19,1:19:21.56:104,22,0	0/0:25,0:25:75.26:0,75,1198	1/1:13,0:12:13.67:59,14,0	1/1:11,2:11:19.68:113,20,0	1/1:4,5:9:22.78:150,23,0	1/1:7,1:7:16.39:81,16,0	1/1:14,0:11:2.60:10,3,0	1/1:8,4:12:3.02:11,3,0	0/1:14,2:14:0:0,0,0	1/1:6,2:7:2.90:16,3,0	1/1:9,1:9:2.86:15,3,0	1/1:8,1:8:8.68:55,9,0	1/1:18,0:18:41.48:240,41,0	1/1:11,0:10:13.39:55,13,0	1/1:7,2:7:11.59:84,12,0
chr10	21078203	.	AC	A	4318.71	PASS	AB=0.750;AC=49;AF=0.875;AN=56;BaseQRankSum=12.749;DP=435;FS=11.625;HRun=2;HaplotypeScore=191.1740;InbreedingCoeff=0.8108;MQ=88.52;MQ0=2;MQRankSum=-12.765;QD=12.82;ReadPosRankSum=-0.496;VQSLOD=2.4627;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:12,2:13:29.79:281,30,0	1/1:4,0:4:8.85:67,9,0	0/0:31,1:32:87.58:0,88,1305	0/0:40,1:38:99:0,104,1531	0/1:4,2:6:0.01:0,0,0	1/1:13,1:14:17.32:146,17,0	1/1:18,0:18:34.02:227,34,0	1/1:22,0:18:48.71:263,49,0	1/1:8,0:8:22.76:164,23,0	1/1:14,4:16:41.91:334,42,0	1/1:12,0:12:5.98:56,6,0	1/1:13,2:15:25.43:149,25,0	1/1:20,0:20:47.93:357,48,0	1/1:19,2:20:30.73:215,31,0	0/0:25,0:25:72.24:0,72,1079	1/1:15,1:15:34.70:286,35,0	1/1:11,3:12:31.87:285,32,0	1/1:4,5:9:23.06:177,23,0	1/1:8,1:8:15.99:88,16,0	1/1:14,0:11:9.03:104,9,0	1/1:10,6:16:13.79:100,14,0	1/1:16,2:16:10.98:57,11,0	1/1:5,2:6:8.89:82,9,0	1/1:9,1:9:5.76:49,6,0	1/1:10,1:10:20.82:174,21,0	1/1:18,2:20:50.14:345,50,0	1/1:11,0:10:19.11:109,19,0	1/1:7,3:7:20.62:206,21,0
chr10	21078845	.	ATT	A	11705.91	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-3.457;DP=510;FS=7.641;HRun=11;HaplotypeScore=71.7398;InbreedingCoeff=0.9847;MQ=73.23;MQ0=1;MQRankSum=-4.127;QD=25.45;ReadPosRankSum=5.401;VQSLOD=4.5095;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,38:40:99:1085,102,0	1/1:1,7:8:18.04:192,18,0	0/0:17,0:15:34.34:0,34,353	0/0:16,0:16:40.74:0,41,391	1/1:2,28:30:81.04:832,81,0	1/1:7,21:28:60.12:639,60,0	1/1:2,15:17:39.09:415,39,0	1/1:7,26:33:78.11:809,78,0	1/1:3,18:21:48.11:510,48,0	1/1:3,16:19:48.11:511,48,0	1/1:1,18:19:54.05:560,54,0	1/1:2,17:19:51.12:543,51,0	1/1:2,14:16:42.09:447,42,0	1/1:4,7:12:18.49:193,18,0	0/0:13,0:13:36.12:0,36,548	1/1:0,14:14:30.08:319,30,0	1/1:2,18:20:45.10:478,45,0	1/1:3,15:18:45.11:479,45,0	1/1:3,18:21:54.13:573,54,0	1/1:3,13:16:33.02:340,33,0	1/1:2,10:12:24.04:255,24,0	1/1:2,5:7:15.02:159,15,0	1/1:2,19:21:54.13:575,54,0	1/1:1,7:8:18.04:192,18,0	1/1:3,12:15:40.91:419,41,0	1/1:1,16:17:39.08:415,39,0	1/1:1,15:16:42.10:447,42,0	1/1:3,10:13:30.02:319,30,0
chr10	21079342	.	CAAAA	C	12632.36	PASS	AB=1.000;AC=44;AF=0.786;AN=56;BaseQRankSum=11.635;DP=602;FS=13.358;HRun=6;HaplotypeScore=133.2499;InbreedingCoeff=0.3533;MQ=62.70;MQ0=2;MQRankSum=-4.346;QD=23.97;ReadPosRankSum=7.458;VQSLOD=0.6699;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,20:21:20.93:313,21,0	0/1:16,0:15:29.22:169,0,29	0/0:22,0:18:50.94:0,51,655	0/0:28,0:24:29.10:0,29,715	0/1:29,0:29:99:307,0,209	1/1:0,21:21:33.11:593,33,0	1/1:0,19:19:21.07:388,21,0	1/1:5,27:31:75.52:820,76,0	1/1:0,18:18:30.10:558,30,0	0/1:34,0:34:99:486,0,101	0/1:13,0:13:71.96:157,0,72	1/1:2,18:20:30.10:557,30,0	1/1:1,29:30:51.17:941,51,0	1/1:0,17:17:21:390,21,0	0/0:24,0:24:66.16:0,66,1461	1/1:0,23:23:27.09:500,27,0	0/1:27,0:26:99:252,0,127	1/1:1,18:19:21.07:391,21,0	0/1:20,0:20:99:100,0,219	1/1:2,19:20:47.68:723,48,0	1/1:7,2:9:26.85:271,27,0	1/1:1,21:22:53.97:838,54,0	1/1:0,21:21:32.53:575,33,0	1/1:0,22:23:27.09:494,27,0	1/1:0,25:25:48.16:893,48,0	1/1:0,11:11:30.09:487,30,0	1/1:1,32:33:68.88:1280,69,0	1/1:1,2:3:9.03:151,9,0
chr10	21079345	.	AAAAC	A	11028.11	PASS	AB=1.000;AC=49;AF=0.875;AN=56;BaseQRankSum=8.181;DP=590;FS=10.433;HRun=0;HaplotypeScore=138.1989;InbreedingCoeff=0.8467;MQ=61.86;MQ0=2;MQRankSum=-1.136;QD=21.33;ReadPosRankSum=2.880;VQSLOD=4.1999;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:22:0.31:178,0,0	1/1:1,14:14:30.10:472,30,0	0/0:20,0:17:15.01:0,15,280	0/0:30,0:23:24.08:0,24,535	1/1:11,18:29:54.18:853,54,0	1/1:21,0:21:33.04:384,33,0	1/1:19,0:19:21.07:260,21,0	1/1:30,0:29:20.96:210,21,0	1/1:18,0:18:30.09:366,30,0	1/1:7,28:35:84.27:1318,84,0	1/1:3,9:12:27.05:405,27,0	1/1:18,0:18:30.10:377,30,0	1/1:29,0:29:51.16:651,51,0	1/1:17,0:17:21.07:263,21,0	0/0:23,0:23:51.17:0,51,1188	1/1:23,0:23:27.08:333,27,0	1/1:8,19:27:45.15:725,45,0	1/1:18,0:17:21.06:251,21,0	1/1:8,11:19:33.04:443,33,0	1/1:20,0:19:19.25:416,19,0	1/1:9,0:9:6:65,6,0	1/1:21,0:21:42.13:535,42,0	1/1:21,0:21:29.40:382,29,0	1/1:23,0:23:27.07:325,27,0	1/1:25,0:25:48.13:565,48,0	1/1:11,0:11:27.01:300,27,0	1/1:32,0:32:69:861,69,0	1/1:3,0:3:8.94:91,9,0
chr10	21080095	.	T	TAA	9389.27	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-2.393;DP=607;FS=3.810;HRun=11;HaplotypeScore=112.8007;InbreedingCoeff=0.9901;MQ=68.69;MQ0=1;MQRankSum=-4.235;QD=24.45;ReadPosRankSum=-1.035;VQSLOD=4.2695;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,14:18:35.56:462,36,0	0/0:7,0:8:14.96:0,15,195	0/0:18,0:18:13.53:0,14,187	0/0:12,0:13:20.32:0,20,169	0/0:35,0:35:68.93:0,69,659	1/1:4,7:14:29.55:362,30,0	1/1:2,9:11:27.06:363,27,0	1/1:9,17:30:60.89:736,61,0	1/1:7,16:27:50.53:632,51,0	0/0:33,0:33:74.99:0,75,737	0/0:17,0:19:35.34:0,35,305	1/1:4,10:16:23.56:298,24,0	1/1:14,13:29:36.13:393,36,0	1/1:5,14:19:34.31:457,34,0	0/0:30,0:31:71.76:0,72,670	1/1:0,17:17:36.12:521,36,0	0/0:42,0:42:99:0,99,953	1/1:2,5:9:18.06:257,18,0	0/0:23,0:23:47.99:0,48,466	1/1:3,18:25:67.48:750,67,0	1/1:3,10:13:24.04:324,24,0	1/1:2,17:20:42.14:593,42,0	1/1:8,17:28:51.76:674,52,0	1/1:8,4:13:21.05:279,21,0	1/1:6,21:28:60.95:778,61,0	1/1:14,13:29:29.95:668,30,0	1/1:8,10:19:35.62:422,36,0	1/1:7,10:18:30.10:420,30,0
chr10	21080129	.	GTGTA	G	1946.88	PASS	AB=0.958;AC=32;AF=0.571;AN=56;BaseQRankSum=5.889;DP=520;FS=2.644;HRun=0;HaplotypeScore=176.7322;InbreedingCoeff=0.4121;MQ=60.83;MQ0=3;MQRankSum=-4.699;QD=7.05;ReadPosRankSum=-0.336;VQSLOD=2.7210;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:11:2.46:18,2,0	0/0:12,0:12:32.80:0,33,240	0/0:28,0:16:41.91:0,42,587	0/0:38,0:27:34.98:0,35,1005	0/0:31,0:31:59.61:0,60,453	0/1:15,2:17:26.62:134,0,27	1/1:10,1:11:8.99:75,9,0	1/1:23,3:23:3.15:161,3,0	0/1:22,3:25:16.05:240,0,16	0/0:36,0:36:32.14:0,32,526	0/0:17,0:17:29.22:0,29,209	1/1:10,0:9:6.43:47,6,0	0/1:13,0:13:20.81:139,0,21	0/1:16,0:16:53.33:53,0,88	0/0:22,0:22:57.11:0,57,1168	1/1:13,0:13:26.64:223,27,0	0/0:43,0:43:89.37:0,89,746	1/1:4,0:4:1.61:30,2,0	0/0:17,0:17:40.39:0,40,301	1/1:20,1:21:17.99:162,18,0	1/1:12,2:12:9.20:74,9,0	1/1:11,0:11:16.95:161,17,0	1/1:18,0:18:2.94:52,3,0	1/1:5,1:6:2.99:24,3,0	1/1:9,4:13:17.97:147,18,0	0/1:23,1:24:60.62:164,0,61	0/1:13,0:13:64.67:112,0,65	1/1:9,1:10:21.03:128,21,0
chr10	21080131	.	GTA	G	3018.86	PASS	AB=0.989;AC=44;AF=0.786;AN=56;BaseQRankSum=7.097;DP=496;FS=1.457;HRun=0;HaplotypeScore=151.1428;InbreedingCoeff=0.2101;MQ=60.04;MQ0=5;MQRankSum=-3.639;QD=7.38;ReadPosRankSum=2.127;VQSLOD=3.5868;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,0:9:5.95:43,6,0	1/1:12,0:12:6.44:128,6,0	0/0:28,0:15:41.86:0,42,493	0/0:38,0:26:39.87:0,40,820	0/1:30,0:30:99:121,0,111	1/1:16,1:17:8.79:195,9,0	1/1:9,1:10:8.37:63,8,0	1/1:24,1:22:32.39:255,32,0	1/1:21,0:21:8.17:225,8,0	0/1:37,0:37:22.07:241,0,22	1/1:16,0:16:3.15:100,3,0	1/1:7,0:6:8.28:56,8,0	1/1:11,2:13:0.04:95,0,0	0/1:13,1:14:48.29:48,0,54	0/0:21,0:21:57.09:0,57,864	1/1:9,2:11:25.40:170,25,0	0/1:44,0:44:99:182,0,173	1/1:4,0:4:8.78:52,9,0	0/1:15,0:15:59.59:60,0,86	1/1:15,2:17:17.93:140,18,0	1/1:15,0:12:15.80:109,16,0	1/1:9,1:10:20.92:163,21,0	1/1:15,2:17:10.25:73,10,0	1/1:7,0:6:2.53:23,3,0	1/1:12,1:13:17.97:147,18,0	1/1:21,3:24:7.73:281,8,0	0/1:12,0:12:22.03:75,0,22	1/1:9,0:9:21.79:140,22,0
chr10	21080133	.	ATG	A	3040.96	PASS	AB=0.995;AC=24;AF=0.429;AN=56;BaseQRankSum=-2.559;DP=489;FS=16.714;HRun=0;HaplotypeScore=152.5304;InbreedingCoeff=0.3995;MQ=57.29;MQ0=6;MQRankSum=3.079;QD=10.38;ReadPosRankSum=1.685;VQSLOD=2.6589;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:0:0,0,0	1/1:1,11:12:30.09:350,30,0	0/0:26,0:14:19.74:0,20,211	0/0:39,0:26:20.67:0,21,364	1/1:8,20:28:39.08:462,39,0	0/0:16,0:16:3.33:0,3,46	0/0:9,0:8:2.96:0,3,19	0/0:23,0:20:25.26:0,25,191	0/1:22,0:22:21.08:21,0,38	1/1:7,28:36:90.05:992,90,0	1/1:4,12:16:27.08:319,27,0	0/1:7,0:6:4.13:9,0,4	0/0:15,0:15:5.58:0,6,56	0/0:14,0:14:13.90:0,14,173	0/0:21,0:21:42.13:0,42,636	0/1:10,0:10:8.64:9,0,10	1/1:15,29:44:53.55:723,54,0	0/0:3,0:3:2.80:0,3,7	1/1:7,9:15:7.51:283,8,0	0/1:17,0:17:3.22:3,0,18	0/1:16,0:13:0.63:1,0,7	1/1:9,0:9:3.06:8,3,0	1/1:15,0:15:2.93:8,3,0	0/0:7,0:6:3:0,3,25	0/1:11,0:11:0.01:0,0,0	0/1:23,1:24:17.45:17,0,204	0/0:13,0:13:11.01:0,11,153	0/1:10,0:10:5.46:5,0,7
chr10	21080163	.	GTCTGTT	G	2680.97	PASS	AB=0.852;AC=26;AF=0.481;AN=54;BaseQRankSum=8.873;DP=476;FS=17.714;HRun=0;HaplotypeScore=167.8811;InbreedingCoeff=0.3884;MQ=44.41;MQ0=25;MQRankSum=-8.000;QD=15.15;ReadPosRankSum=3.674;VQSLOD=1.7622;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:5:1.25:0,1,3	0/0:16,0:15:45.15:0,45,1322	0/0:42,0:9:16.25:0,16,602	0/0:47,0:12:16.68:0,17,602	0/0:26,0:26:58.75:0,59,1343	1/1:9,3:12:13.66:239,14,0	0/1:6,2:8:6.40:93,0,6	0/1:11,0:8:30.10:30,0,66	0/1:14,3:17:83.29:271,0,83	0/0:49,0:48:99:0,141,4285	0/0:21,0:21:51.85:0,52,978	1/1:9,1:9:3.99:145,4,0	0/1:9,5:14:47.01:267,0,47	1/1:13,0:13:19.92:231,20,0	0/0:21,0:21:63.20:0,63,2098	1/1:6,2:8:15.01:391,15,0	0/0:43,0:43:80.33:0,80,2982	1/1:2,0:2:3.35:15,3,0	0/0:18,0:15:42.14:0,42,1200	1/1:9,1:11:5.40:144,5,0	1/1:13,2:10:3.66:28,4,0	1/1:2,1:3:6.02:145,6,0	1/1:7,4:11:5.88:97,6,0	./.	0/0:2,2:4:0.89:0,1,2	0/1:21,0:21:99:272,0,351	0/1:10,4:14:99:327,0,172	1/1:5,1:6:8.75:165,9,0
chr10	21080173	.	GTATA	G	806.37	PASS	AB=0.968;AC=22;AF=0.407;AN=54;BaseQRankSum=8.389;DP=455;FS=15.425;HRun=0;HaplotypeScore=157.9117;InbreedingCoeff=0.2175;MQ=43.20;MQ0=28;MQRankSum=-8.064;QD=5.76;ReadPosRankSum=-0.178;VQSLOD=1.3274;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:3,1:4:1.25:0,1,3	0/0:16,0:15:42.14:0,42,1140	0/0:46,0:8:13.09:0,13,403	0/0:42,0:9:20.88:0,21,506	0/0:32,0:32:71.92:0,72,1753	0/1:11,0:11:16.61:82,0,17	0/1:8,1:8:14.85:17,0,15	0/0:6,0:3:2.89:0,3,39	0/1:15,0:15:51.89:75,0,52	0/0:57,0:56:99:0,166,4306	0/0:22,0:22:42.09:0,42,1065	1/1:8,1:8:3.18:51,3,0	0/1:13,0:13:49.49:83,0,49	0/1:9,1:10:39.83:47,0,40	0/0:22,0:22:66.23:0,66,1785	1/1:8,0:8:15.84:141,16,0	0/0:40,0:40:96.33:0,96,2602	0/1:4,0:4:3.84:68,0,4	0/0:18,0:15:42.14:0,42,1096	1/1:5,1:6:5.44:42,5,0	1/1:11,0:8:2.70:12,3,0	1/1:3,0:3:5.98:47,6,0	1/1:8,1:9:2.99:24,3,0	./.	0/0:4,0:4:0:0,0,0	0/1:14,1:15:99:122,0,173	0/1:12,0:12:96.26:96,0,133	1/1:5,0:5:6.84:65,7,0
chr10	21080197	.	GTAT	G	456.68	PASS	AB=0.717;AC=10;AF=0.200;AN=50;BaseQRankSum=6.979;DP=387;FS=23.610;HRun=0;HaplotypeScore=137.4846;InbreedingCoeff=0.1603;MQ=45.68;MQ0=18;MQRankSum=-5.932;QD=10.38;ReadPosRankSum=0.109;VQSLOD=1.5838;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:1,1:2:0:0,0,0	0/0:12,0:12:36.12:0,36,867	0/0:29,0:4:12.04:0,12,274	0/0:33,0:10:25.63:0,26,497	0/0:38,0:38:75.59:0,76,1874	0/0:4,2:6:10.32:0,10,105	1/1:1,1:1:2.90:16,3,0	./.	0/1:6,5:11:88.01:160,0,88	0/0:51,0:50:99:0,147,3551	0/0:25,0:25:51.18:0,51,1205	0/0:5,2:8:4.93:0,5,57	0/1:5,2:7:61.83:62,0,92	0/0:9,1:10:13.59:0,14,191	0/0:30,0:30:90.31:0,90,2112	0/0:6,1:7:6.61:0,7,27	0/0:49,0:49:99:0,117,2772	0/1:2,2:4:19.17:76,0,19	0/0:23,0:20:60.21:0,60,1440	0/0:6,0:6:3.31:0,3,22	./.	0/0:3,0:3:4.09:0,4,17	0/0:5,0:5:2.74:0,3,12	0/0:2,3:5:0:0,0,0	./.	0/1:5,2:7:77.32:77,0,136	0/1:5,3:8:99:107,0,131	1/1:1,2:3:6.49:86,6,0
chr10	21080215	.	CTGT	C	42.01	PASS	AB=0.805;AC=11;AF=0.229;AN=48;BaseQRankSum=5.935;DP=369;FS=19.714;HRun=0;HaplotypeScore=97.5917;InbreedingCoeff=0.2585;MQ=48.46;MQ0=14;MQRankSum=-4.840;QD=0.95;ReadPosRankSum=0.107;VQSLOD=0.4402;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:3,1:4:0.11:0,0,0	0/0:11,0:11:33.11:0,33,759	0/0:30,0:8:23.75:0,24,475	0/0:28,0:10:28.32:0,28,511	0/0:40,0:40:81.18:0,81,1654	0/0:2,2:4:0:0,0,0	0/0:4,0:4:2.99:0,3,47	./.	0/1:6,2:8:14.97:32,0,15	0/0:50,0:49:99:0,141,3082	0/0:27,0:27:61.09:0,61,1281	1/1:3,2:5:0.50:2,1,0	0/1:3,2:5:0.42:2,0,0	0/0:1,0:1:0:0,0,0	0/0:30,0:30:87.30:0,87,2000	0/0:5,1:6:3.01:0,3,32	0/0:51,0:51:99:0,117,2697	0/1:3,2:5:40.82:41,0,55	0/0:26,0:24:66.23:0,66,1496	0/1:3,0:3:0.03:0,0,0	0/0:5,0:4:0:0,0,1	0/0:3,0:3:0:0,0,0	./.	./.	./.	0/1:5,1:6:7.51:8,0,185	0/1:4,2:6:22.88:23,0,28	1/1:0,2:2:5.96:43,6,0
chr10	21080279	.	ATATG	A	560.80	PASS	AB=0.870;AC=11;AF=0.204;AN=54;BaseQRankSum=7.498;DP=744;FS=15.478;HRun=0;HaplotypeScore=206.1315;InbreedingCoeff=-0.2575;MQ=39.43;MQ0=56;MQRankSum=-4.163;QD=2.40;ReadPosRankSum=-0.152;VQSLOD=1.5227;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:32,7:37:10.81:11,0,872	0/0:7,0:7:21.04:0,21,468	0/0:40,0:3:8.83:0,9,57	./.	0/0:42,0:40:99:0,105,2723	0/0:11,0:11:17.86:0,18,494	0/0:24,0:19:38.46:0,38,869	0/0:31,0:15:41.98:0,42,696	0/1:18,2:19:64.81:65,0,481	0/0:42,0:41:93.38:0,93,2703	0/0:15,0:15:39.13:0,39,980	0/1:19,3:21:62.28:62,0,547	0/1:17,0:16:45.31:45,0,712	0/1:16,11:24:41:41,0,315	0/0:56,0:55:99:0,144,3542	0/1:20,3:22:99:127,0,804	0/0:44,0:43:85.82:0,86,2523	0/1:21,0:20:13.86:14,0,850	0/0:30,0:22:63.20:0,63,1573	0/0:10,1:11:14.89:0,15,330	0/0:49,0:42:79.07:0,79,2060	0/0:15,3:15:17.98:0,18,452	0/1:15,2:15:80.09:80,0,354	0/0:42,1:40:7.06:0,7,1411	0/0:11,1:12:19.06:0,19,576	0/1:22,4:22:99:156,0,825	0/1:8,3:11:6.32:6,0,244	0/1:8,3:11:96.70:97,0,547
chr10	21081249	.	TCCCC	T	337.09	PASS	AB=0.923;AC=11;AF=0.220;AN=50;BaseQRankSum=-2.514;DP=219;FS=5.336;HRun=4;HaplotypeScore=107.5344;InbreedingCoeff=0.3800;MQ=58.78;MQ0=3;MQRankSum=1.259;QD=3.70;ReadPosRankSum=-0.941;VQSLOD=-0.6614;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:6:9.26:0,9,31	0/0:2,0:2:3.47:0,3,10	0/0:9,2:9:18.02:0,18,193	0/1:14,4:13:89.15:89,0,245	0/0:12,1:11:12.81:0,13,51	0/0:6,2:8:6.26:0,6,19	0/0:9,0:9:7.09:0,7,23	1/1:10,2:8:16.32:156,16,0	0/0:4,0:4:6.66:0,7,21	1/1:8,0:8:11.64:83,12,0	0/0:5,0:5:7.77:0,8,30	0/0:8,2:9:11.48:0,11,38	0/0:11,1:10:16.15:0,16,53	0/0:11,1:11:13.90:0,14,46	0/1:21,0:21:21.31:21,0,66	1/1:6,1:7:4.22:103,4,0	0/0:3,0:3:2.22:0,2,7	./.	./.	0/0:4,0:2:4.23:0,4,15	0/0:3,1:3:0:0,0,0	0/1:8,0:7:5.04:14,0,5	0/0:6,1:5:5.19:0,5,19	0/0:2,1:3:0:0,0,0	0/0:3,1:5:4.27:0,4,14	1/1:15,0:12:3.33:6,3,0	0/0:4,1:5:6.08:0,6,18	./.
chr10	21081849	.	T	TA	2046.79	PASS	AB=0.900;AC=17;AF=0.304;AN=56;BaseQRankSum=-6.075;DP=567;FS=3.958;HRun=13;HaplotypeScore=69.6610;InbreedingCoeff=0.4567;MQ=75.54;MQ0=0;MQRankSum=1.670;QD=7.78;ReadPosRankSum=-1.829;VQSLOD=2.3782;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:47.48:0,47,333	1/1:3,7:10:21.02:195,21,0	0/1:17,0:19:9.39:9,0,18	0/0:9,0:10:10.58:0,11,79	1/1:14,29:43:65.93:587,66,0	0/0:18,0:18:41.50:0,41,281	0/0:18,0:19:34.56:0,35,225	0/0:24,0:25:31.61:0,32,207	0/1:12,1:13:1.11:1,0,136	1/1:15,12:27:12.31:237,12,0	1/1:2,18:20:35.95:315,36,0	0/0:21,0:21:44.47:0,44,306	0/0:16,0:16:29.64:0,30,203	0/0:26,0:26:59.25:0,59,397	0/1:16,3:20:24.36:24,0,138	0/1:13,0:13:0.69:1,0,117	1/1:7,28:37:62.82:558,63,0	0/0:29,0:29:54.28:0,54,408	0/1:8,11:20:15.75:266,0,16	0/0:26,0:29:26.75:0,27,280	0/0:11,0:11:29.72:0,30,205	0/1:16,0:16:12.65:13,0,133	0/0:17,0:17:27.81:0,28,179	0/0:16,1:17:33.50:0,33,224	0/0:18,0:18:44.56:0,45,307	0/1:23,2:25:20.16:20,0,169	0/0:18,0:18:23.67:0,24,164	0/0:3,0:3:5.94:0,6,41
chr10	21082184	.	AT	A	10166.33	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=0.292;DP=543;FS=15.921;HRun=11;HaplotypeScore=63.8939;InbreedingCoeff=0.7974;MQ=74.08;MQ0=0;MQRankSum=-1.861;QD=20.05;ReadPosRankSum=3.362;VQSLOD=4.4457;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,31:37:82.94:671,83,0	1/1:1,7:8:20.97:172,21,0	0/0:15,0:13:3.92:0,4,83	0/0:9,0:8:0.22:0,0,71	1/1:1,23:25:67.95:548,68,0	1/1:4,15:19:44.94:369,45,0	1/1:3,18:21:47.92:394,48,0	1/1:6,19:25:56.86:457,57,0	1/1:0,20:20:56.94:468,57,0	1/1:1,24:25:71.90:589,72,0	1/1:2,14:16:32.94:271,33,0	1/1:2,18:20:44.82:369,45,0	1/1:4,15:19:35.94:296,36,0	1/1:2,13:16:40.99:326,41,0	0/0:11,1:12:11.44:0,11,321	1/1:4,13:18:8.99:269,9,0	1/1:2,25:27:71.91:591,72,0	1/1:5,22:27:30.93:461,31,0	1/1:4,18:22:53.92:443,54,0	1/1:1,17:18:50.90:414,51,0	1/1:5,15:20:41.94:345,42,0	1/1:1,17:18:50.94:419,51,0	1/1:1,10:11:26.95:222,27,0	1/1:3,16:19:44.91:369,45,0	1/1:0,18:19:55.98:449,56,0	1/1:2,21:23:33.93:485,34,0	1/1:1,24:25:68.92:566,69,0	1/1:0,8:9:26.01:203,26,0
chr10	21082995	.	G	GAA	9110.71	PASS	AB=0.665;AC=43;AF=0.768;AN=56;BaseQRankSum=-4.675;DP=704;FS=6.355;HRun=13;HaplotypeScore=107.3426;InbreedingCoeff=0.2034;MQ=74.83;MQ0=1;MQRankSum=-1.750;QD=14.37;ReadPosRankSum=1.260;VQSLOD=3.8628;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,26:36:35.62:665,36,0	0/1:5,0:16:9.99:50,0,10	0/0:43,0:30:32.17:0,32,199	0/1:27,0:16:0.78:1,0,36	0/1:9,1:30:10.82:120,0,11	1/1:2,17:21:20.71:521,21,0	1/1:6,16:27:28.68:556,29,0	1/1:9,17:29:63.93:628,64,0	1/1:2,19:22:27.09:367,27,0	0/1:11,0:31:78.57:93,0,79	0/1:13,0:21:0.44:84,0,0	0/1:8,14:23:0.41:361,0,0	1/1:6,19:28:15.59:422,16,0	1/1:2,11:15:26.41:287,26,0	0/0:24,0:26:52.75:0,53,486	1/1:4,15:24:19.90:476,20,0	0/1:7,1:27:13.95:94,0,14	1/1:2,26:35:68.66:770,69,0	0/1:10,0:25:28.80:101,0,29	1/1:4,10:17:39.01:460,39,0	1/1:3,7:10:12.04:163,12,0	1/1:1,19:25:59.39:611,59,0	1/1:11,17:32:16.92:330,17,0	1/1:3,12:19:32.58:392,33,0	1/1:10,16:28:3.15:308,3,0	1/1:8,15:27:56.51:652,57,0	1/1:9,5:18:22.98:424,23,0	0/1:6,9:19:29.32:177,0,29
chr10	21083536	.	A	AG	21966.63	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-14.880;DP=741;FS=7.074;HRun=2;HaplotypeScore=67.0021;InbreedingCoeff=0.9987;MQ=84.53;MQ0=0;MQRankSum=-4.168;QD=40.38;ReadPosRankSum=3.620;VQSLOD=5.0310;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,61:62:99:2471,166,0	0/0:10,0:10:30.10:0,30,384	0/0:27,0:27:49.79:0,50,798	0/0:20,0:20:51.16:0,51,651	0/0:20,0:20:54.18:0,54,701	1/1:0,19:19:54.18:809,54,0	1/1:1,27:28:72.24:1079,72,0	1/1:0,27:27:81.25:1170,81,0	1/1:0,28:28:69.23:1034,69,0	0/0:23,0:23:66.21:0,66,857	0/0:25,0:25:72.22:0,72,919	1/1:1,29:30:81.27:1214,81,0	1/1:0,28:28:81.27:1213,81,0	1/1:1,28:29:81.27:1213,81,0	0/0:29,0:29:84.26:0,84,1076	1/1:0,26:26:75.25:1124,75,0	0/0:19,0:18:57.19:0,57,740	1/1:3,28:31:75.25:1124,75,0	0/0:24,0:24:72.22:0,72,911	1/1:0,37:37:99:1571,105,0	1/1:0,30:30:75.25:1124,75,0	1/1:1,31:32:87.29:1303,87,0	1/1:0,24:24:69.23:1033,69,0	1/1:0,22:22:60.20:899,60,0	1/1:0,25:25:72.24:1079,72,0	1/1:2,34:36:63.36:1424,63,0	1/1:1,21:22:54.18:809,54,0	1/1:0,8:8:18.06:270,18,0
chr10	21084550	.	T	TTG	3004.15	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=14.744;DP=631;FS=9.034;HRun=0;HaplotypeScore=133.2410;InbreedingCoeff=0.9246;MQ=60.22;MQ0=4;MQRankSum=-14.345;QD=27.82;ReadPosRankSum=2.049;VQSLOD=4.9995;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,102,1428	1/1:5,6:11:21.02:275,21,0	0/0:14,0:6:12.04:0,12,168	0/0:14,0:6:3.41:0,3,26	1/1:3,13:16:45:530,45,0	0/0:21,0:21:60.19:0,60,825	0/0:38,0:38:99:0,108,1428	0/0:22,0:22:63.18:0,63,834	0/0:27,0:27:81.17:0,81,1073	1/1:7,20:25:68.65:830,69,0	1/1:6,12:18:36.12:491,36,0	0/0:25,0:25:72.23:0,72,993	0/0:20,0:20:57.18:0,57,781	0/0:29,0:29:87.27:0,87,1185	0/0:31,0:31:90.30:0,90,1259	0/0:29,0:29:84.27:0,84,1160	1/1:10,11:20:38.95:486,39,0	0/0:23,0:23:69.22:0,69,944	1/1:2,13:15:41.78:579,42,0	0/0:29,0:29:84.27:0,84,1156	0/0:19,0:19:45.10:0,45,630	0/0:27,0:27:66.17:0,66,885	0/0:19,0:19:57.19:0,57,797	0/0:23,0:23:60.17:0,60,791	0/0:22,0:22:63.19:0,63,863	0/0:22,1:23:2.76:0,3,741	0/0:25,0:25:75.23:0,75,1017	0/0:6,0:6:18.06:0,18,252
chr10	21084554	.	G	GT	2137.19	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=14.854;DP=634;FS=8.847;HRun=1;HaplotypeScore=124.8257;InbreedingCoeff=0.9561;MQ=61.67;MQ0=4;MQRankSum=-14.121;QD=21.37;ReadPosRankSum=2.350;VQSLOD=3.1834;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,123,1632	1/1:6,5:11:20.99:198,21,0	0/0:13,0:8:4.39:0,4,181	0/0:8,0:6:7.82:0,8,61	1/1:15,1:16:44.65:389,45,0	0/0:22,0:22:66.19:0,66,883	0/0:39,0:39:99:0,117,1556	0/0:25,0:25:72.14:0,72,922	0/0:27,0:27:81.26:0,81,1113	1/1:26,0:24:68.70:632,69,0	1/1:15,0:15:36.05:345,36,0	0/0:24,0:24:72.23:0,72,991	0/0:20,0:20:57.18:0,57,779	0/0:32,0:32:93.27:0,93,1248	0/0:31,0:31:90.30:0,90,1256	0/0:28,0:28:84.27:0,84,1157	1/1:18,0:17:38.91:358,39,0	0/0:23,0:23:69.22:0,69,946	1/1:14,0:14:40.62:402,41,0	0/0:29,0:29:84.27:0,84,1147	0/0:18,0:18:51.05:0,51,670	0/0:26,0:26:69.17:0,69,906	0/0:20,0:20:60.18:0,60,817	0/0:21,0:21:63.18:0,63,827	0/0:23,0:23:69.19:0,69,921	0/0:25,0:25:24.70:0,25,841	0/0:27,0:27:81.21:0,81,1061	0/0:8,0:8:24.08:0,24,326
chr10	21084560	.	CCCCCA	C	3606.76	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=13.979;DP=602;FS=6.683;HRun=0;HaplotypeScore=160.3819;InbreedingCoeff=0.9734;MQ=64.56;MQ0=1;MQRankSum=-13.409;QD=46.84;ReadPosRankSum=2.837;VQSLOD=3.2692;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,135,4252	1/1:1,6:7:18.06:309,18,0	0/0:10,0:8:10.74:0,11,300	0/0:7,0:7:8.99:0,9,252	1/1:0,13:14:42.13:653,42,0	0/0:21,0:21:63.22:0,63,2005	0/0:37,0:37:99:0,108,3431	0/0:28,0:28:81.26:0,81,2402	0/0:26,0:26:78.27:0,78,2448	1/1:0,19:18:54.13:873,54,0	1/1:0,12:12:36.12:597,36,0	0/0:24,0:24:72.25:0,72,2319	0/0:20,0:20:60.21:0,60,1922	0/0:33,0:33:99:0,99,3157	0/0:32,0:32:96.33:0,96,3081	0/0:26,0:26:78.27:0,78,2443	1/1:0,11:10:30.10:518,30,0	0/0:21,0:21:63.22:0,63,1986	1/1:0,13:13:38.62:657,39,0	0/0:29,0:29:84.29:0,84,2685	0/0:19,0:19:54.19:0,54,1708	0/0:29,0:29:84.27:0,84,2636	0/0:20,0:20:60.21:0,60,1929	0/0:20,0:20:60.21:0,60,1933	0/0:21,0:21:63.22:0,63,2006	0/0:21,1:22:13.38:0,13,1955	0/0:25,0:25:75.26:0,75,2397	0/0:8,0:8:24.08:0,24,775
chr10	21088150	.	G	GA	5541.84	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-11.262;DP=751;FS=11.344;HRun=1;HaplotypeScore=67.5484;InbreedingCoeff=0.9983;MQ=92.58;MQ0=0;MQRankSum=-1.984;QD=39.58;ReadPosRankSum=0.441;VQSLOD=4.6344;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,105,1349	1/1:0,7:7:18.06:270,18,0	0/0:34,0:34:99:0,99,1252	0/0:29,0:29:81.16:0,81,977	1/1:0,22:22:57.19:854,57,0	0/0:30,0:30:87.28:0,87,1129	0/0:15,0:15:45.15:0,45,584	0/0:29,0:29:84.25:0,84,1064	0/0:25,0:25:72.22:0,72,919	1/1:4,28:32:87.28:1263,87,0	1/1:0,25:25:63.21:944,63,0	0/0:24,0:24:69.21:0,69,881	0/0:29,0:29:78.21:0,78,981	0/0:31,0:31:90.27:0,90,1139	0/0:42,0:41:99:0,123,1580	0/0:21,0:21:63.18:0,63,792	1/1:0,26:28:78.26:1148,78,0	0/0:26,0:26:75.24:0,75,973	1/1:1,25:26:75.21:1063,75,0	0/0:23,0:23:69.21:0,69,881	0/0:31,0:31:90.29:0,90,1167	0/0:19,0:19:54.18:0,54,701	0/0:33,0:33:99:0,99,1252	0/0:36,0:36:99:0,105,1363	0/0:26,0:26:75.24:0,75,974	0/0:32,0:32:96.31:0,96,1246	0/0:25,0:24:75.23:0,75,958	0/0:15,0:15:39.11:0,39,491
chr10	21088593	.	G	GC	3939.40	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-11.403;DP=612;FS=4.825;HRun=7;HaplotypeScore=59.1736;InbreedingCoeff=0.9988;MQ=83.99;MQ0=0;MQRankSum=-1.940;QD=30.54;ReadPosRankSum=-0.055;VQSLOD=3.9736;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,102,979	1/1:0,7:7:21.06:254,21,0	0/0:24,0:24:63.03:0,63,592	0/0:21,0:21:48.06:0,48,454	1/1:4,33:37:93.22:1089,93,0	0/0:22,0:22:63.10:0,63,608	0/0:17,0:17:45.06:0,45,429	0/0:22,0:22:51.07:0,51,493	0/0:19,0:19:48.06:0,48,457	1/1:3,18:21:54.17:652,54,0	1/1:4,11:15:39.12:464,39,0	0/0:16,0:16:45.07:0,45,434	0/0:22,0:22:54.05:0,54,514	0/0:29,0:29:78.12:0,78,753	0/0:24,0:24:66.10:0,66,637	0/0:30,0:30:84.13:0,84,811	1/1:3,25:27:69.21:834,69,0	0/0:16,0:16:48.08:0,48,464	1/1:4,17:21:54.16:647,54,0	0/0:17,0:17:42.06:0,42,405	0/0:11,0:11:30.05:0,30,290	0/0:20,0:20:51.08:0,51,492	0/0:23,0:23:54.08:0,54,521	0/0:28,0:28:66.09:0,66,637	0/0:26,0:26:69.11:0,69,666	0/0:20,0:20:51.07:0,51,493	0/0:28,0:28:78.10:0,78,746	0/0:11,0:11:27.04:0,27,261
chr10	21091167	.	T	TTTA	3958.65	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-8.071;DP=388;FS=2.349;HRun=0;HaplotypeScore=52.2309;InbreedingCoeff=0.9104;MQ=68.62;MQ0=0;MQRankSum=-2.077;QD=41.67;ReadPosRankSum=0.774;VQSLOD=4.3950;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:60.20:0,60,920	1/1:0,6:6:18.06:358,18,0	0/0:6,0:6:12.04:0,12,173	0/0:7,0:6:11.35:0,11,94	1/1:4,7:11:21.07:336,21,0	0/0:19,0:19:57.18:0,57,844	0/0:9,0:9:15.05:0,15,229	0/0:37,0:37:93.29:0,93,1354	0/0:10,0:10:27.09:0,27,405	1/1:3,11:15:36.12:724,36,0	1/1:3,9:12:27.09:475,27,0	0/0:5,0:5:6.02:0,6,91	0/0:17,0:17:45.14:0,45,658	0/0:9,0:9:12.04:0,12,177	0/0:11,0:10:27.09:0,27,414	0/0:7,0:7:18.06:0,18,275	1/1:3,18:23:39.13:832,39,0	0/0:27,0:27:72.24:0,72,1104	1/1:6,21:28:63.21:1233,63,0	0/0:14,0:14:33.10:0,33,485	0/0:5,0:5:6.02:0,6,87	0/0:4,0:4:6.02:0,6,92	0/0:8,0:8:21.06:0,21,291	0/0:8,0:8:18.06:0,18,276	0/0:13,0:13:30.10:0,30,460	0/0:22,0:22:57.17:0,57,826	0/0:14,0:14:39.09:0,39,535	0/0:16,0:16:39.11:0,39,575
chr10	21094791	.	CGTGTGTGT	C	6948.32	PASS	AB=0.805;AC=34;AF=0.607;AN=56;BaseQRankSum=7.241;DP=689;FS=2.482;HRun=0;HaplotypeScore=178.4849;InbreedingCoeff=0.6137;MQ=60.32;MQ0=16;MQRankSum=-7.478;QD=14.48;ReadPosRankSum=1.914;VQSLOD=3.6525;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:26,21:48:10.83:392,0,11	0/0:9,0:10:18.06:0,18,509	0/0:30,0:19:7.84:0,8,113	0/0:36,0:21:10.82:0,11,112	0/0:21,0:21:21.07:0,21,734	1/1:12,8:20:9.46:172,9,0	1/1:24,12:34:17.86:449,18,0	0/1:29,0:26:49.91:68,0,50	1/1:14,10:25:24.08:500,24,0	0/0:20,0:21:27.09:0,27,668	0/0:10,0:15:24.06:0,24,547	1/1:11,13:24:24.08:604,24,0	1/1:17,4:25:38.48:648,38,0	1/1:12,4:16:12.01:244,12,0	0/0:21,0:25:39.13:0,39,1377	1/1:14,8:24:18.06:414,18,0	0/0:35,0:36:78.24:0,78,2752	0/1:14,5:19:99:136,0,117	0/0:14,0:13:12.04:0,12,248	1/1:17,9:26:32.86:776,33,0	1/1:36,16:53:4.15:77,4,0	1/1:15,7:23:12.04:236,12,0	1/1:8,4:12:2.82:75,3,0	0/1:13,6:20:67.96:70,0,68	1/1:8,3:13:14.78:318,15,0	1/1:20,17:39:48.49:1064,48,0	1/1:13,7:21:23.11:515,23,0	1/1:6,1:7:11.99:190,12,0
chr10	21095203	.	GGCACA	G	5544.06	PASS	AB=0.923;AC=13;AF=0.232;AN=56;BaseQRankSum=12.805;DP=705;FS=1.886;HRun=0;HaplotypeScore=140.8953;InbreedingCoeff=0.8912;MQ=81.58;MQ0=0;MQRankSum=-10.642;QD=43.31;ReadPosRankSum=-1.053;VQSLOD=4.8208;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,160,4883	1/1:0,5:5:12.04:267,12,0	0/0:16,0:16:42.14:0,42,1197	0/0:28,0:28:82.15:0,82,2295	1/1:0,21:21:54.19:1172,54,0	0/0:22,0:21:63.22:0,63,2013	0/0:33,0:33:99:0,99,3080	0/0:25,0:25:69.18:0,69,2007	0/0:17,0:17:51.16:0,51,1552	1/1:1,30:31:90.29:1947,90,0	1/1:0,15:15:42.12:905,42,0	0/0:34,0:34:99:0,102,3186	0/0:35,0:35:99:0,99,3077	0/0:28,0:28:84.29:0,84,2663	0/0:33,0:33:90.31:0,90,2787	0/0:34,0:34:99:0,99,3126	1/1:3,13:16:20.63:421,21,0	0/0:19,0:18:57.17:0,57,1752	1/1:2,14:16:39.12:767,39,0	0/0:19,0:19:51.18:0,51,1608	0/0:56,0:56:99:0,166,5016	0/0:24,0:24:72.23:0,72,2168	0/0:16,0:16:48.15:0,48,1477	0/0:27,0:27:81.28:0,81,2482	0/0:23,0:23:69.24:0,69,2110	0/1:22,2:24:64.50:65,0,1952	0/0:28,0:28:81.28:0,81,2566	0/0:6,0:6:18.06:0,18,581
chr10	21095333	.	CAAA	C	6119.27	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=15.038;DP=697;FS=0.000;HRun=3;HaplotypeScore=107.3587;InbreedingCoeff=0.9974;MQ=86.87;MQ0=0;MQRankSum=-6.320;QD=45.67;ReadPosRankSum=1.778;VQSLOD=4.3682;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,120,2865	1/1:0,11:11:20.94:315,21,0	0/0:41,0:41:99:0,123,2677	0/0:22,0:21:60.17:0,60,1276	1/1:0,20:19:47.94:778,48,0	0/0:19,0:19:57.19:0,57,1331	0/0:23,0:23:69.24:0,69,1674	0/0:20,0:20:60.20:0,60,1416	0/0:27,0:27:81.27:0,81,1928	1/1:0,36:36:99:1830,102,0	1/1:0,15:15:36.07:633,36,0	0/0:37,0:37:99:0,111,2649	0/0:39,0:39:99:0,117,2713	0/0:22,0:22:66.21:0,66,1578	0/0:30,0:30:90.30:0,90,2126	0/0:31,0:31:87.30:0,87,2108	1/1:1,24:25:72.08:1299,72,0	0/0:20,0:20:57.20:0,57,1405	1/1:0,27:27:75.18:1263,75,0	0/0:25,0:25:75.26:0,75,1829	0/0:19,0:19:57.20:0,57,1385	0/0:27,0:27:81.28:0,81,1997	0/0:21,0:21:63.21:0,63,1491	0/0:11,0:11:33.11:0,33,810	0/0:30,0:30:90.31:0,90,2176	0/0:23,0:23:69.22:0,69,1592	0/0:30,0:30:90.31:0,90,2192	0/0:6,0:6:18.06:0,18,443
chr10	21095611	.	T	TCTGGGACC	9350.05	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=5.552;DP=675;FS=1.427;HRun=0;HaplotypeScore=176.2144;InbreedingCoeff=0.9993;MQ=88.19;MQ0=1;MQRankSum=-13.233;QD=89.90;ReadPosRankSum=-2.086;VQSLOD=4.6058;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,135,3643	1/1:5,6:12:27.09:1111,27,0	0/0:31,0:30:67.87:0,68,2192	0/0:29,0:28:81.07:0,81,1811	1/1:5,15:19:35.61:1621,36,0	0/0:28,0:28:81.27:0,81,2293	0/0:33,0:33:99:0,99,2795	0/0:23,0:23:60.19:0,60,1599	0/0:24,0:24:72.23:0,72,1940	1/1:10,11:21:60.21:2479,60,0	1/1:5,7:12:24.08:1037,24,0	0/0:29,0:29:87.30:0,87,2470	0/0:34,0:34:99:0,99,2861	0/0:28,0:28:81.28:0,81,2372	0/0:28,0:28:84.27:0,84,2277	0/0:22,0:22:66.23:0,66,1928	1/1:8,7:17:33.11:1408,33,0	0/0:19,0:19:57.20:0,57,1608	1/1:14,5:22:54.14:1695,54,0	0/0:15,0:15:45.15:0,45,1318	0/0:32,0:31:93.32:0,93,2722	0/0:18,0:18:51.17:0,51,1464	0/0:20,0:20:54.18:0,54,1579	0/0:27,0:27:78.27:0,78,2241	0/0:28,0:28:84.29:0,84,2367	0/0:24,0:24:72.25:0,72,2108	0/0:20,0:20:60.21:0,60,1755	0/0:12,0:12:36.12:0,36,1054
chr10	21095731	.	AG	A	4306.63	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=15.792;DP=701;FS=21.937;HRun=4;HaplotypeScore=83.4965;InbreedingCoeff=0.9997;MQ=86.60;MQ0=0;MQRankSum=-3.912;QD=33.38;ReadPosRankSum=0.880;VQSLOD=2.9606;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,123,1684	1/1:0,12:12:33.10:396,33,0	0/0:22,0:22:63.20:0,63,845	0/0:26,0:26:57.18:0,57,778	1/1:0,26:26:69.21:828,69,0	0/0:21,0:21:63.21:0,63,882	0/0:18,0:18:54.18:0,54,755	0/0:33,0:33:96.31:0,96,1324	0/0:31,0:31:81.27:0,81,1131	1/1:2,21:23:63.18:745,63,0	1/1:0,13:13:39.12:468,39,0	0/0:28,0:28:84.28:0,84,1170	0/0:28,0:28:81.27:0,81,1131	0/0:28,0:28:84.28:0,84,1176	0/0:22,0:22:66.22:0,66,920	0/0:18,0:18:51.16:0,51,697	1/1:0,35:35:99:1259,105,0	0/0:18,0:18:54.18:0,54,756	1/1:4,16:20:51.16:611,51,0	0/0:20,0:20:54.15:0,54,721	0/0:51,0:51:99:0,151,2098	0/0:25,0:25:69.20:0,69,924	0/0:19,0:19:51.16:0,51,694	0/0:35,0:35:99:0,99,1349	0/0:22,0:22:54.18:0,54,754	0/0:22,1:23:27.20:0,27,804	0/0:21,0:20:60.20:0,60,837	0/0:19,0:19:49.41:0,49,671
chr10	21098770	.	C	CCT	4374.06	PASS	AB=0.950;AC=13;AF=0.232;AN=56;BaseQRankSum=6.857;DP=523;FS=3.852;HRun=0;HaplotypeScore=94.4343;InbreedingCoeff=0.9148;MQ=82.61;MQ0=6;MQRankSum=-7.140;QD=35.85;ReadPosRankSum=0.729;VQSLOD=6.9243;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:39.13:0,39,630	1/1:0,4:4:11.25:171,11,0	0/0:68,0:30:76.54:0,77,759	0/0:56,0:29:50.76:0,51,489	1/1:10,13:23:52.07:825,52,0	0/0:14,0:14:42.13:0,42,655	0/0:13,0:13:39.12:0,39,606	0/0:26,0:26:75.23:0,75,1155	0/0:16,0:16:48.15:0,48,755	1/1:6,19:24:66.20:1167,66,0	1/1:5,17:22:62.61:861,63,0	0/0:10,0:10:30.10:0,30,488	0/0:14,0:14:42.07:0,42,622	0/0:5,0:5:15.05:0,15,244	0/0:15,0:15:45.14:0,45,709	0/0:13,0:13:39.12:0,39,612	1/1:5,7:12:30.07:505,30,0	0/0:32,0:32:75.87:0,76,1411	1/1:4,13:17:48.15:844,48,0	0/0:19,0:19:57.18:0,57,896	0/0:3,0:3:9.03:0,9,146	0/0:9,0:9:27.09:0,27,431	0/0:21,0:21:63.17:0,63,948	0/0:5,0:5:14.96:0,15,141	0/0:19,0:19:57.18:0,57,898	0/1:18,1:19:1.58:2,0,800	0/0:16,0:16:48.15:0,48,754	0/0:14,0:14:42.07:0,42,561
chr10	21098782	.	AT	A	1488.77	PASS	AB=0.974;AC=14;AF=0.250;AN=56;BaseQRankSum=13.367;DP=487;FS=5.793;HRun=6;HaplotypeScore=84.3156;InbreedingCoeff=0.7813;MQ=79.27;MQ0=4;MQRankSum=-4.725;QD=7.79;ReadPosRankSum=1.050;VQSLOD=0.4024;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:45.12:0,45,565	1/1:0,4:7:9.72:85,10,0	0/1:50,2:22:15.94:16,0,129	0/1:47,0:26:31.03:31,0,121	1/1:6,16:22:56.58:449,57,0	0/0:16,0:16:48.11:0,48,578	0/0:13,0:13:39.10:0,39,476	0/0:23,0:23:63.18:0,63,768	0/0:16,0:16:42.12:0,42,528	1/1:6,10:16:39.96:308,40,0	1/1:4,13:17:40.47:303,40,0	0/0:9,0:9:21.07:0,21,271	0/0:12,0:12:36.12:0,36,465	0/0:5,0:5:15.05:0,15,194	0/0:16,0:16:48.10:0,48,565	0/0:15,0:15:36.10:0,36,449	1/1:0,10:10:17.97:165,18,0	0/0:34,0:34:99:0,99,1259	1/1:3,11:15:40.06:322,40,0	0/0:20,0:20:51.14:0,51,631	0/0:3,0:3:9.03:0,9,116	0/0:9,0:9:27.09:0,27,349	0/0:20,0:20:57.16:0,57,708	0/0:4,0:4:12.04:0,12,155	0/0:19,0:19:57.19:0,57,737	0/0:20,1:21:21.72:0,22,555	0/0:16,0:16:48.13:0,48,585	0/0:10,0:10:30.10:0,30,387
chr10	21098909	.	T	TG	989.38	PASS	AB=0.667;AC=7;AF=0.125;AN=56;BaseQRankSum=12.385;DP=544;FS=5.776;HRun=0;HaplotypeScore=90.5252;InbreedingCoeff=0.0565;MQ=82.11;MQ0=0;MQRankSum=-10.825;QD=9.80;ReadPosRankSum=2.550;VQSLOD=3.5742;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,108,1510	0/1:4,5:9:68.08:127,0,68	0/0:19,0:19:57.18:0,57,765	0/0:15,0:15:24.94:0,25,527	1/1:6,20:26:0.82:334,1,0	0/0:17,0:17:48.16:0,48,671	0/0:14,0:14:42.12:0,42,569	0/0:21,0:21:63.19:0,63,840	0/0:22,0:22:63.21:0,63,880	0/1:7,12:19:99:295,0,132	0/1:9,8:17:99:103,0,132	0/0:13,0:13:33.11:0,33,461	0/0:16,0:16:48.14:0,48,653	0/0:10,0:10:30.10:0,30,419	0/0:23,0:23:69.20:0,69,930	0/0:15,0:15:45.12:0,45,595	0/1:10,8:18:99:134,0,137	0/0:20,0:20:60.20:0,60,839	0/1:7,5:12:99:121,0,117	0/0:22,0:22:66.22:0,66,923	0/0:23,0:23:69.23:0,69,964	0/0:21,0:21:63.21:0,63,881	0/0:18,0:18:51.14:0,51,679	0/0:22,0:22:60.17:0,60,818	0/0:24,0:24:72.22:0,72,988	0/0:28,1:28:59.21:0,59,1091	0/0:25,0:25:75.24:0,75,1031	0/0:17,0:17:51.14:0,51,677
chr10	21098910	.	C	CTGGGATT	7956.35	PASS	AB=0.967;AC=13;AF=0.232;AN=56;BaseQRankSum=14.420;DP=545;FS=6.197;HRun=0;HaplotypeScore=141.1835;InbreedingCoeff=0.9005;MQ=82.81;MQ0=0;MQRankSum=-13.844;QD=61.68;ReadPosRankSum=-1.575;VQSLOD=4.4012;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,108,2984	1/1:4,5:9:27.06:655,27,0	0/0:19,0:19:54.04:0,54,1210	0/0:16,0:16:40.76:0,41,1005	1/1:6,20:26:75.17:2217,75,0	0/0:19,0:19:51.16:0,51,1365	0/0:13,0:13:39.13:0,39,1051	0/0:21,0:21:60.03:0,60,1449	0/0:23,0:23:66.18:0,66,1649	1/1:5,12:19:51.13:1658,51,0	1/1:9,8:17:51:1312,51,0	0/0:14,0:14:39.08:0,39,911	0/0:15,0:15:45.15:0,45,1205	0/0:10,0:10:30.10:0,30,755	0/0:23,0:23:66.20:0,66,1673	0/0:13,0:13:39.13:0,39,1075	1/1:10,7:18:39.13:1250,39,0	0/0:20,0:20:60.21:0,60,1659	1/1:6,5:11:27.97:845,28,0	0/0:23,0:23:66.23:0,66,1843	0/0:24,0:24:69.22:0,69,1842	0/0:21,0:21:63.22:0,63,1685	0/0:18,0:18:48.12:0,48,1236	0/0:22,0:22:63.07:0,63,1570	0/0:24,0:24:69.24:0,69,1866	0/1:28,1:28:18.71:19,0,1978	0/0:25,0:25:75.15:0,75,1920	0/0:15,0:15:45.11:0,45,1190
chr10	21100301	.	TA	T	2324.01	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=6.618;DP=474;FS=0.970;HRun=5;HaplotypeScore=85.2391;InbreedingCoeff=0.9148;MQ=77.16;MQ0=0;MQRankSum=-6.338;QD=24.21;ReadPosRankSum=-1.606;VQSLOD=2.0785;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:48.16:0,48,656	1/1:0,10:10:24.06:272,24,0	0/0:15,1:16:6.51:0,7,410	0/1:8,0:8:1.93:2,0,224	1/1:1,23:24:69.19:778,69,0	0/0:25,0:25:66.21:0,66,887	0/0:22,0:22:63.19:0,63,839	0/0:34,0:34:90.29:0,90,1214	0/0:21,0:21:54.18:0,54,739	1/1:0,15:15:45.13:508,45,0	1/1:2,13:15:30.08:340,30,0	0/0:14,0:14:36.12:0,36,493	0/0:19,0:19:54.18:0,54,737	0/0:8,0:8:15.03:0,15,205	0/0:16,0:16:48.16:0,48,657	0/0:21,0:21:57.18:0,57,763	1/1:0,12:12:21.06:236,21,0	0/0:10,0:10:30.10:0,30,410	1/1:1,11:12:33.09:374,33,0	0/0:16,0:16:42.13:0,42,558	0/0:13,0:13:39.12:0,39,518	0/0:17,0:17:42.61:0,43,574	0/0:14,0:14:33.11:0,33,451	0/0:13,0:13:33.11:0,33,451	0/0:14,0:14:39.13:0,39,533	0/0:22,0:22:60.20:0,60,821	0/0:33,0:33:93.31:0,93,1265	0/0:8,0:8:24.08:0,24,328
chr10	21100318	.	A	AC	7953.70	PASS	AB=0.889;AC=38;AF=0.679;AN=56;BaseQRankSum=-9.873;DP=512;FS=0.938;HRun=8;HaplotypeScore=94.1244;InbreedingCoeff=0.6578;MQ=72.92;MQ0=1;MQRankSum=3.596;QD=20.45;ReadPosRankSum=4.563;VQSLOD=4.6038;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,22:24:48.14:554,48,0	0/0:9,0:9:8.61:0,9,48	0/0:20,0:19:39.17:0,39,340	0/0:16,0:13:16.82:0,17,142	0/1:27,0:28:52.83:53,0,61	1/1:4,16:20:44.97:499,45,0	1/1:0,20:20:57.17:658,57,0	0/0:33,0:33:72.01:0,72,659	1/1:2,16:18:42.12:485,42,0	0/1:17,0:17:17.30:17,0,143	0/1:13,0:13:22.15:22,0,39	1/1:1,15:16:42.08:470,42,0	1/1:3,16:19:45.12:511,45,0	1/1:5,11:16:26.73:311,27,0	0/0:18,0:18:51.01:0,51,462	1/1:3,23:26:44.74:761,45,0	0/0:11,0:10:6.04:0,6,113	0/1:4,9:13:0.10:250,0,0	0/0:15,0:15:19.96:0,20,129	1/1:2,11:13:36.11:415,36,0	1/1:4,18:22:47.97:535,48,0	1/1:10,1:24:4.27:27,4,0	1/1:0,15:15:33.09:372,33,0	1/1:3,13:16:33.10:378,33,0	1/1:1,9:10:27.08:312,27,0	1/1:5,14:19:39.08:429,39,0	1/1:10,17:29:32.65:595,33,0	1/1:3,8:11:27.07:302,27,0
chr10	21100326	.	CAT	C	48.08	PASS	AB=0.847;AC=5;AF=0.089;AN=56;BaseQRankSum=5.471;DP=527;FS=2.181;HRun=0;HaplotypeScore=127.6124;InbreedingCoeff=0.0093;MQ=70.20;MQ0=2;MQRankSum=-4.804;QD=0.73;ReadPosRankSum=-4.147;VQSLOD=0.5434;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:56.88:0,57,662	0/1:3,2:5:12.08:25,0,12	0/0:26,0:24:24.19:0,24,744	0/0:24,0:14:18.52:0,19,330	0/1:18,4:22:10.85:25,0,11	0/0:18,0:18:48.14:0,48,578	0/0:24,0:24:69.19:0,69,853	0/0:35,0:35:96.26:0,96,1574	0/0:20,0:20:51.12:0,51,626	0/1:15,4:18:49.72:66,0,50	0/1:9,0:9:6.93:7,0,10	0/0:18,0:18:48.11:0,48,556	0/0:20,0:20:51.07:0,51,619	0/0:21,0:21:50.62:0,51,700	0/0:22,0:22:66.20:0,66,1158	0/0:27,0:27:75.21:0,75,935	0/0:10,0:9:8.40:0,8,22	0/0:12,0:12:33.02:0,33,366	0/1:9,2:10:12.46:39,0,12	0/0:14,0:14:42.11:0,42,497	0/0:24,0:24:60.13:0,60,763	0/0:22,0:23:33.38:0,33,430	0/0:17,0:17:33.07:0,33,378	0/0:16,0:16:39.57:0,40,491	0/0:10,0:10:30.09:0,30,369	0/0:17,0:17:42.08:0,42,517	0/0:28,0:28:81.22:0,81,1083	0/0:12,0:12:36.11:0,36,457
chr10	21100367	.	CAG	C	4365.05	PASS	AB=0.939;AC=37;AF=0.685;AN=54;BaseQRankSum=3.130;DP=504;FS=2.557;HRun=0;HaplotypeScore=100.7499;InbreedingCoeff=0.6599;MQ=55.59;MQ0=7;MQRankSum=4.717;QD=12.23;ReadPosRankSum=3.585;VQSLOD=4.7898;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:22,4:25:23.65:268,24,0	0/0:7,0:7:2.94:0,3,18	./.	0/0:26,0:8:0:0,0,0	0/0:16,0:16:3.41:0,3,19	1/1:15,7:21:35.85:370,36,0	1/1:10,2:13:11.86:114,12,0	0/0:31,0:28:32.61:0,33,340	1/1:12,5:17:29.63:314,30,0	0/0:14,0:13:1.83:0,2,17	0/1:11,0:11:0.02:0,0,0	1/1:8,5:14:23.72:221,24,0	1/1:14,5:18:26.53:260,27,0	1/1:10,7:18:35.93:384,36,0	0/0:23,1:24:8.49:0,8,558	1/1:13,10:24:47.65:475,48,0	0/1:14,0:13:0.07:0,0,0	1/1:13,2:16:17.25:136,17,0	0/0:9,0:8:8.32:0,8,40	1/1:10,1:14:21.30:153,21,0	1/1:26,3:29:33.56:359,34,0	0/1:14,2:17:21.75:161,0,22	1/1:15,3:18:14.51:141,15,0	1/1:14,5:19:29.94:304,30,0	1/1:10,1:11:8.99:88,9,0	1/1:12,2:13:20.54:161,21,0	1/1:16,9:25:10.85:360,11,0	1/1:8,2:11:11.70:95,12,0
chr10	21101226	.	C	CA	5669.43	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=12.316;DP=791;FS=12.933;HRun=5;HaplotypeScore=99.9637;InbreedingCoeff=0.9957;MQ=73.50;MQ0=1;MQRankSum=-7.146;QD=32.03;ReadPosRankSum=-0.470;VQSLOD=3.4928;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,120,1269	1/1:1,18:19:51.17:671,51,0	0/0:36,0:32:44.79:0,45,685	0/0:27,0:22:16.10:0,16,396	1/1:4,30:33:87.11:1055,87,0	0/0:27,0:26:81.19:0,81,862	0/0:25,0:25:66.04:0,66,675	0/0:29,0:29:73.40:0,73,784	0/0:25,0:25:75.17:0,75,797	1/1:2,36:38:96.30:1242,96,0	1/1:3,30:32:78.25:1018,78,0	0/0:25,0:25:69.14:0,69,724	0/0:22,0:22:60.15:0,60,644	0/0:30,0:30:87.20:0,87,922	0/0:23,0:23:69.16:0,69,734	0/0:17,0:17:48.11:0,48,509	1/1:2,27:29:69.22:907,69,0	0/0:14,0:14:39.06:0,39,408	1/1:3,21:24:60.19:777,60,0	0/0:46,0:46:99:0,126,1308	0/0:33,0:33:93.22:0,93,997	0/0:31,0:31:84.19:0,84,893	0/0:35,0:35:99:0,99,1047	0/0:35,0:35:90.15:0,90,944	0/0:25,0:25:75.19:0,75,806	0/0:20,1:21:17.67:0,18,541	0/0:25,0:25:66.16:0,66,707	0/0:18,0:18:41.80:0,42,440
chr10	21101326	.	T	TCA	13899.44	PASS	AB=0.662;AC=33;AF=0.635;AN=52;BaseQRankSum=-7.788;DP=969;FS=1.053;HRun=0;HaplotypeScore=145.8724;InbreedingCoeff=-0.0695;MQ=65.60;MQ0=23;MQRankSum=1.256;QD=16.83;ReadPosRankSum=1.428;VQSLOD=4.7365;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:22,31:53:3.78:824,0,4	1/1:10,0:9:0.47:2,0,0	0/0:37,1:23:8.96:0,9,99	0/0:39,0:29:3:0,3,30	./.	1/1:9,17:26:21.68:454,22,0	0/1:15,22:38:14.57:661,0,15	0/1:34,6:36:35.56:373,0,36	0/1:22,22:42:2.02:818,0,2	1/1:24,0:19:9.73:82,10,0	./.	1/1:19,27:48:34.75:986,35,0	0/1:15,23:39:17.49:944,0,17	0/1:15,22:38:49.08:857,0,49	0/0:35,0:33:19.20:0,19,631	0/1:22,21:43:12.13:775,0,12	1/1:17,0:17:4.86:20,5,0	0/1:19,17:36:9.49:659,0,9	1/1:18,0:15:17.24:129,17,0	1/1:10,24:31:41.96:651,42,0	1/1:44,28:71:39.36:1470,39,0	0/1:18,23:40:5.71:688,0,6	0/1:10,14:24:1.36:432,0,1	0/1:19,26:51:19.26:682,0,19	0/1:14,18:30:61.54:454,0,62	1/1:14,28:40:17.23:1112,17,0	1/1:13,14:28:14.18:616,14,0	0/1:6,5:12:47.81:211,0,48
chr10	21101353	.	CCTCAT	C	343.38	PASS	AB=0.928;AC=4;AF=0.074;AN=54;BaseQRankSum=6.548;DP=1111;FS=3.526;HRun=0;HaplotypeScore=230.2501;InbreedingCoeff=0.1879;MQ=48.59;MQ0=61;MQRankSum=-7.140;QD=5.45;ReadPosRankSum=-2.936;VQSLOD=2.3926;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:63,1:65:73.49:0,73,2515	1/1:3,1:4:1.38:3,1,0	0/0:58,0:8:14.40:0,14,422	0/0:50,0:10:20.73:0,21,561	0/0:15,1:10:3.01:0,3,64	0/0:35,0:33:68.69:0,69,1625	0/0:53,1:49:50.39:0,50,1719	0/0:62,0:43:67.50:0,68,2244	0/0:46,1:42:96.13:0,96,2142	0/1:30,4:21:99:336,0,404	./.	0/0:46,1:49:76.85:0,77,2308	0/0:44,0:44:63.12:0,63,2163	0/0:46,0:44:99:0,117,2869	0/0:44,1:44:84.15:0,84,2907	0/0:39,0:39:97.86:0,98,2258	0/0:7,1:7:8.92:0,9,214	0/0:37,0:39:25.34:0,25,1670	0/1:20,1:14:94.69:95,0,479	0/0:32,0:31:63.06:0,63,1165	0/0:94,0:91:99:0,211,4799	0/0:37,1:37:84.21:0,84,1775	0/0:23,0:24:50.91:0,51,1038	0/0:55,0:56:88.11:0,88,1917	0/0:35,0:33:39.83:0,40,1682	0/0:45,0:42:84.11:0,84,2134	0/0:27,0:26:65.99:0,66,1184	0/0:14,0:17:36.05:0,36,810
chr10	21101400	.	CCCACCTCAT	C	390.72	PASS	AB=0.948;AC=5;AF=0.089;AN=56;BaseQRankSum=5.370;DP=1129;FS=8.541;HRun=0;HaplotypeScore=304.7135;InbreedingCoeff=0.0431;MQ=51.98;MQ0=22;MQRankSum=-5.220;QD=2.44;ReadPosRankSum=-3.430;VQSLOD=0.0484;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:60,0:59:99:0,147,5585	0/0:9,0:7:5.38:0,5,83	0/0:45,0:19:57.01:0,57,1696	0/0:36,0:13:38.81:0,39,939	0/1:35,0:30:0.02:0,0,0	0/0:35,0:33:90.26:0,90,3825	0/0:39,0:37:89.21:0,89,3318	0/0:63,0:60:99:0,176,6439	0/0:46,0:43:99:0,123,5099	0/1:58,0:45:99:145,0,2352	0/0:19,0:16:5.23:0,5,83	0/0:57,0:56:99:0,126,5533	0/1:40,1:40:3.39:3,0,3736	0/0:61,0:59:99:0,147,6858	0/0:61,0:60:99:0,121,6416	0/0:48,0:48:99:0,132,5546	0/1:10,0:8:59.08:154,0,59	0/0:29,0:29:23.38:0,23,2811	0/1:11,5:15:99:190,0,512	0/0:21,0:21:56.96:0,57,2353	0/0:113,0:110:99:0,274,11572	0/0:37,0:36:92.91:0,93,3935	0/0:21,0:21:53.19:0,53,2381	0/0:51,0:50:98.12:0,98,4145	0/0:32,0:30:55.52:0,56,3186	0/0:41,0:39:92.88:0,93,4378	0/0:26,0:26:62.95:0,63,2539	0/0:19,0:19:54.19:0,54,2341
chr10	21101415	.	C	CAT	420.24	PASS	AB=0.939;AC=6;AF=0.107;AN=56;BaseQRankSum=6.124;DP=1330;FS=43.754;HRun=0;HaplotypeScore=187.5300;InbreedingCoeff=0.5130;MQ=47.65;MQ0=92;MQRankSum=-6.223;QD=2.64;ReadPosRankSum=-2.022;VQSLOD=0.9412;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:68,0:63:99:0,135,1891	1/1:19,2:18:6.95:41,7,0	0/0:36,0:15:45.14:0,45,644	0/0:29,0:12:30.42:0,30,397	0/0:37,6:37:0:0,0,0	0/0:36,0:34:61.16:0,61,1235	0/0:54,0:39:84.21:0,84,1234	0/0:88,0:51:99:0,138,1948	0/0:60,0:51:99:0,123,1786	0/1:74,11:58:99:427,0,789	1/1:34,1:25:2.78:58,3,0	0/0:59,0:57:99:0,137,1948	0/0:41,0:38:93.37:0,93,1315	0/0:58,0:54:99:0,156,2205	0/0:68,0:66:99:0,163,2284	0/0:58,0:49:99:0,129,1909	0/1:15,0:9:10.16:10,0,22	0/0:29,0:27:62.95:0,63,879	0/0:29,0:14:24.73:0,25,207	0/0:28,0:25:54.18:0,54,823	0/0:135,0:118:99:0,260,3758	0/0:48,0:43:96.32:0,96,1448	0/0:26,0:25:63.16:0,63,914	0/0:53,0:51:90.27:0,90,1326	0/0:30,0:27:70.83:0,71,1076	0/0:43,0:36:85.29:0,85,1411	0/0:30,0:29:63.16:0,63,918	0/0:22,0:22:57.59:0,58,821
chr10	21101425	.	C	CAT	248.43	PASS	AB=0.918;AC=4;AF=0.071;AN=56;BaseQRankSum=7.228;DP=1443;FS=14.821;HRun=0;HaplotypeScore=180.2068;InbreedingCoeff=0.2926;MQ=45.24;MQ0=163;MQRankSum=-5.698;QD=1.50;ReadPosRankSum=-1.208;VQSLOD=1.0539;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:70,0:62:99:0,141,2037	0/1:23,2:21:12.91:13,0,28	0/0:22,0:11:33.02:0,33,444	0/0:23,0:10:23.27:0,23,293	0/0:37,7:39:0:0,0,0	0/0:38,0:35:70.40:0,70,1182	0/0:68,0:45:66.21:0,66,987	0/0:108,0:48:99:0,127,1765	0/0:65,0:51:99:0,123,1850	0/1:91,10:62:99:320,0,649	1/1:39,1:28:1.62:5,2,0	0/0:58,0:55:99:0,140,2025	0/0:51,0:45:99:0,120,1651	0/0:60,1:55:99:0,156,2342	0/0:73,0:69:99:0,158,2340	0/0:60,0:48:99:0,138,2063	0/0:15,0:8:4.78:0,5,26	0/0:29,0:27:57.77:0,58,877	0/0:32,0:8:6.77:0,7,155	0/0:33,0:28:63.21:0,63,960	0/0:143,0:118:99:0,252,3722	0/0:48,0:43:96.31:0,96,1441	0/0:31,0:26:69.21:0,69,1031	0/0:51,0:48:93.28:0,93,1378	0/0:34,0:29:74.32:0,74,1124	0/0:52,0:38:99:0,105,1524	0/0:35,0:29:63.19:0,63,963	0/0:32,0:32:78.84:0,79,1072
chr10	21101429	.	TAC	T	59.99	PASS	AB=0.968;AC=4;AF=0.077;AN=52;BaseQRankSum=6.469;DP=1484;FS=9.058;HRun=0;HaplotypeScore=173.7747;InbreedingCoeff=0.4364;MQ=44.19;MQ0=186;MQRankSum=-5.168;QD=0.43;ReadPosRankSum=-2.501;VQSLOD=1.7495;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:68,0:60:99:0,132,2202	1/1:14,10:21:9.26:82,9,0	0/0:19,0:9:17.99:0,18,234	0/0:20,0:7:15.05:0,15,232	./.	0/0:37,0:34:75.18:0,75,1194	0/0:71,0:46:60.20:0,60,1025	0/0:113,0:45:99:0,103,1491	0/0:64,0:51:99:0,114,1945	0/1:93,7:60:73.03:73,0,611	./.	0/0:57,0:54:99:0,138,2232	0/0:53,0:45:99:0,120,1952	0/0:62,0:55:99:0,154,2607	0/0:74,0:70:99:0,151,2496	0/0:61,0:49:99:0,141,2386	0/1:15,0:8:8.64:9,0,13	0/0:28,0:26:53:0,53,897	0/0:40,0:12:12.96:0,13,159	0/0:39,0:33:69.22:0,69,1155	0/0:144,0:115:99:0,243,3959	0/0:49,0:44:81.26:0,81,1355	0/0:31,0:26:66.23:0,66,1108	0/0:58,0:53:99:0,105,1655	0/0:36,0:31:78.23:0,78,1262	0/0:56,0:39:99:0,108,1688	0/0:38,0:32:72.24:0,72,1191	0/0:40,0:37:73.44:0,73,1345
chr10	21101451	.	TAC	T	83.58	PASS	AB=0.982;AC=5;AF=0.100;AN=50;BaseQRankSum=7.683;DP=1695;FS=8.763;HRun=0;HaplotypeScore=190.8117;InbreedingCoeff=0.6066;MQ=41.61;MQ0=269;MQRankSum=-6.684;QD=0.53;ReadPosRankSum=0.211;VQSLOD=1.4992;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:76,1:64:99:0,120,2022	1/1:27,2:24:5.53:74,6,0	./.	./.	0/0:40,2:38:0:0,0,0	0/0:33,0:28:19.12:0,19,839	0/0:94,0:62:78.24:0,78,1219	0/0:181,0:51:99:0,119,1609	0/0:67,1:53:67.91:0,68,1687	0/1:109,2:61:99:99,0,699	./.	0/0:74,0:62:99:0,135,2207	0/0:62,0:50:99:0,129,2168	0/0:68,0:58:99:0,135,2164	0/0:84,0:73:99:0,151,2482	0/0:71,0:56:99:0,141,2311	1/1:16,0:9:3.13:13,3,0	0/0:40,0:33:75.25:0,75,1240	0/0:32,0:12:17:0,17,178	0/0:41,0:33:60.19:0,60,993	0/0:167,0:120:99:0,216,3483	0/0:50,0:42:87.30:0,87,1458	0/0:43,0:32:66.44:0,66,1087	0/0:62,0:53:99:0,102,1674	0/0:40,0:34:58.20:0,58,1093	0/0:70,0:43:99:0,116,1934	0/0:44,0:37:75.25:0,75,1213	0/0:38,0:35:71.03:0,71,1304
chr10	21101471	.	TAC	T	224.57	PASS	AB=0.925;AC=3;AF=0.058;AN=52;BaseQRankSum=7.241;DP=1628;FS=22.740;HRun=0;HaplotypeScore=185.4615;InbreedingCoeff=0.4861;MQ=41.61;MQ0=246;MQRankSum=-6.754;QD=1.78;ReadPosRankSum=-2.308;VQSLOD=1.0049;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:67,0:55:99:0,108,1782	1/1:16,11:23:6.51:58,7,0	./.	./.	0/0:30,7:33:0:0,0,0	0/0:26,0:22:41.99:0,42,651	0/0:103,0:64:72.19:0,72,1103	0/0:180,0:62:99:0,138,2065	0/0:66,0:51:99:0,108,1608	0/1:91,7:55:99:260,0,549	0/0:30,11:30:2.92:0,3,17	0/0:68,0:56:99:0,131,2065	0/0:65,0:54:99:0,135,2276	0/0:65,0:56:99:0,132,2132	0/0:75,0:64:99:0,127,2061	0/0:67,0:53:99:0,129,2101	0/0:16,0:10:5.93:0,6,47	0/0:43,0:36:81.24:0,81,1291	0/0:35,0:12:23.29:0,23,284	0/0:38,0:29:57.18:0,57,925	0/0:162,1:113:99:0,214,3528	0/0:45,0:38:77.47:0,77,1267	0/0:47,0:36:76.91:0,77,1189	0/0:68,0:59:99:0,138,2266	0/0:34,0:28:55.88:0,56,981	0/0:71,0:46:99:0,122,2058	0/0:38,0:32:68.95:0,69,1074	0/0:40,0:37:85.17:0,85,1418
chr10	21101481	.	TAC	T	46.03	PASS	AB=0.923;AC=3;AF=0.056;AN=54;BaseQRankSum=5.962;DP=1564;FS=13.170;HRun=0;HaplotypeScore=169.4305;InbreedingCoeff=0.4392;MQ=41.96;MQ0=231;MQRankSum=-5.155;QD=0.43;ReadPosRankSum=-2.159;VQSLOD=1.6279;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:64,1:53:93.27:0,93,1507	1/1:21,3:21:8.05:53,8,0	0/0:2,0:1:3.01:0,3,35	./.	0/0:25,1:23:0:0,0,0	0/0:25,1:22:40.64:0,41,590	0/0:91,0:54:47.55:0,48,782	0/0:173,0:63:99:0,127,1894	0/0:65,0:50:99:0,102,1604	0/1:77,4:44:88.03:88,0,339	0/0:34,7:29:3.01:0,3,35	0/0:68,0:57:89.38:0,89,2041	0/0:65,0:56:99:0,147,2331	0/0:59,0:50:99:0,117,1925	0/0:77,0:65:99:0,112,1735	0/0:66,0:52:99:0,126,2078	0/0:15,1:10:3:0,3,28	0/0:41,1:35:72.25:0,72,1203	0/0:38,0:11:17.89:0,18,212	0/0:38,0:29:57.19:0,57,963	0/0:161,0:116:99:0,226,3671	0/0:41,0:37:87.27:0,87,1413	0/0:46,0:36:77.21:0,77,1166	0/0:64,2:57:99:0,129,2114	0/0:34,0:30:66.19:0,66,1044	0/0:68,0:44:99:0,123,2017	0/0:38,0:32:69.80:0,70,1042	0/0:38,0:35:72.30:0,72,1216
chr10	21101499	.	CAT	C	52.23	PASS	AB=0.973;AC=5;AF=0.089;AN=56;BaseQRankSum=6.251;DP=1456;FS=14.209;HRun=0;HaplotypeScore=160.0560;InbreedingCoeff=0.2562;MQ=44.50;MQ0=183;MQRankSum=-5.758;QD=0.41;ReadPosRankSum=-2.003;VQSLOD=1.6394;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:59,1:49:99:0,102,1844	1/1:20,1:19:0.47:14,0,0	0/0:7,0:6:11.14:0,11,167	0/0:10,0:2:6.01:0,6,78	0/0:18,1:15:0:0,0,0	0/0:24,0:21:24.49:0,24,599	0/0:73,0:55:84.25:0,84,1517	0/0:136,0:68:99:0,183,3042	0/0:66,0:51:99:0,117,2051	0/1:62,1:31:52.32:52,0,291	0/0:25,4:20:3.01:0,3,48	0/0:76,0:64:99:0,137,2511	0/0:68,0:60:99:0,162,2798	0/0:56,0:47:99:0,120,2196	0/0:70,0:59:99:0,115,2053	0/0:68,0:56:99:0,147,2602	0/1:15,0:9:5.14:5,0,5	0/0:46,0:39:79.80:0,80,1711	0/1:27,2:7:48.58:82,0,49	0/0:40,0:32:75.24:0,75,1398	0/0:150,1:113:99:0,256,4659	0/0:43,0:40:99:0,102,1789	0/0:46,0:37:91.81:0,92,1638	0/0:64,0:56:99:0,132,2477	0/0:37,0:34:90.29:0,90,1608	0/0:66,0:47:99:0,131,2325	0/0:39,0:33:68.39:0,68,1049	0/0:33,0:31:75.21:0,75,1291
chr10	21101513	.	CAT	C	128.16	PASS	AB=0.926;AC=8;AF=0.143;AN=56;BaseQRankSum=6.946;DP=1267;FS=14.091;HRun=0;HaplotypeScore=142.3535;InbreedingCoeff=0.3628;MQ=48.02;MQ0=136;MQRankSum=-4.162;QD=1.29;ReadPosRankSum=-1.848;VQSLOD=1.7547;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:50,1:44:96.07:0,96,1545	1/1:8,3:9:3:42,3,0	0/0:19,0:11:29.42:0,29,397	0/0:22,0:8:3.39:0,3,208	0/1:8,1:6:0:0,0,0	0/0:24,0:21:40.18:0,40,777	0/0:61,0:50:99:0,108,1453	0/0:102,0:67:99:0,180,2477	0/0:56,0:46:97.52:0,98,1803	0/1:27,4:14:21.81:139,0,22	1/1:11,6:12:2.92:17,3,0	0/0:69,0:61:99:0,141,2520	0/0:65,0:59:99:0,159,2435	0/0:57,0:49:99:0,131,2065	0/0:72,0:63:99:0,129,2004	0/0:62,0:55:99:0,123,2404	0/1:10,1:8:17.49:34,0,17	0/0:45,1:41:62.90:0,63,1620	0/1:20,0:4:12.73:16,0,13	0/0:36,0:32:84.18:0,84,1299	0/0:119,0:94:99:0,234,3771	0/0:38,0:36:99:0,99,1613	0/0:48,0:39:99:0,102,1641	0/0:62,0:54:99:0,135,2303	0/0:34,0:33:67.89:0,68,1393	0/0:60,0:46:99:0,116,2028	0/0:35,0:31:54.03:0,54,1068	0/0:29,0:27:59.18:0,59,1071
chr10	21101548	.	TAC	T	44.65	PASS	AC=4;AF=0.080;AN=50;BaseQRankSum=3.817;DP=1074;FS=11.996;HRun=0;HaplotypeScore=145.9007;InbreedingCoeff=0.7776;MQ=55.53;MQ0=33;MQRankSum=-3.629;QD=2.48;ReadPosRankSum=-0.622;VQSLOD=2.0951;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:40:96.30:0,96,1589	./.	0/0:44,0:17:43.18:0,43,557	0/0:35,0:15:16.12:0,16,403	./.	0/0:26,0:26:60.20:0,60,1034	0/0:45,0:42:99:0,120,1985	0/0:72,0:53:99:0,135,2194	0/0:58,0:58:99:0,157,2666	1/1:7,2:6:9.03:115,9,0	./.	0/0:63,0:61:99:0,156,2645	0/0:52,0:52:99:0,147,2418	0/0:56,0:56:99:0,138,2310	0/0:71,0:69:99:0,172,2855	0/0:61,0:61:99:0,169,2806	0/0:1,1:2:3.01:0,3,52	0/0:38,0:37:88.29:0,88,1439	1/1:8,1:2:3:28,3,0	0/0:28,0:28:81.26:0,81,1358	0/0:107,0:98:99:0,241,4024	0/0:39,0:38:99:0,105,1781	0/0:35,0:35:96.31:0,96,1595	0/0:52,0:50:99:0,114,1891	0/0:32,0:32:84.26:0,84,1400	0/0:49,0:48:99:0,126,2100	0/0:23,0:23:63.17:0,63,1021	0/0:14,0:14:42.14:0,42,681
chr10	21101590	.	CAT	C	122.43	PASS	AB=0.802;AC=3;AF=0.058;AN=52;BaseQRankSum=5.327;DP=1152;FS=3.190;HRun=0;HaplotypeScore=132.8661;InbreedingCoeff=0.1717;MQ=51.55;MQ0=74;MQRankSum=-5.173;QD=2.60;ReadPosRankSum=-1.597;VQSLOD=2.5703;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:43:99:0,105,1998	./.	0/0:36,0:18:54.17:0,54,929	0/0:30,0:7:21.07:0,21,393	./.	0/0:23,0:22:48.15:0,48,876	0/0:41,0:35:70.25:0,70,1459	0/0:73,0:50:99:0,144,2500	0/0:60,1:60:99:0,161,2933	0/1:13,8:10:20.54:170,0,21	0/1:8,4:9:0:0,0,0	0/0:66,0:64:99:0,168,3110	0/0:52,0:46:99:0,126,2327	0/0:54,0:53:99:0,144,2698	0/0:73,0:68:99:0,186,3427	0/0:63,0:61:99:0,178,3296	0/0:2,0:2:3.01:0,3,57	0/0:40,0:39:90.76:0,91,1646	0/1:13,1:2:13.94:40,0,14	0/0:38,0:38:99:0,105,1913	0/0:112,0:100:99:0,259,4752	0/0:43,0:41:99:0,108,1983	0/0:32,0:30:78.20:0,78,1383	0/0:47,0:42:99:0,117,2147	0/0:44,0:41:99:0,102,1801	0/0:62,0:60:99:0,172,3167	0/0:29,0:27:80.06:0,80,1485	0/0:22,0:21:60.21:0,60,1149
chr10	21101596	.	CATAT	C	74.63	PASS	AB=0.733;AC=3;AF=0.056;AN=54;BaseQRankSum=5.418;DP=1134;FS=0.000;HRun=0;HaplotypeScore=168.8431;InbreedingCoeff=0.6531;MQ=51.64;MQ0=70;MQRankSum=-5.169;QD=2.33;ReadPosRankSum=-1.719;VQSLOD=2.4378;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,2:46:99:0,107,2906	0/0:5,2:7:0:0,0,0	0/0:39,0:18:54.19:0,54,1456	0/0:30,0:9:27.09:0,27,656	./.	0/0:20,1:20:45.13:0,45,1076	0/0:31,3:29:43.99:0,44,1808	0/0:71,0:55:99:0,160,3966	0/0:58,1:58:99:0,159,4112	1/1:16,5:10:8.87:157,9,0	0/1:7,1:7:0:0,0,0	0/0:65,0:63:99:0,162,4288	0/0:49,0:44:99:0,120,3155	0/0:52,0:51:99:0,144,3928	0/0:75,0:70:99:0,186,4865	0/0:65,0:63:99:0,174,4446	0/0:2,1:2:3.01:0,3,37	0/0:36,1:36:93.28:0,93,2391	0/0:7,1:1:2.74:0,3,12	0/0:39,0:39:99:0,105,2666	0/0:104,4:100:99:0,259,6871	0/0:44,0:42:99:0,112,2919	0/0:33,0:31:81.23:0,81,1988	0/0:48,0:43:99:0,120,3102	0/0:40,0:38:93.28:0,93,2352	0/0:59,0:56:99:0,161,4148	0/0:27,0:26:81.28:0,81,2068	0/0:22,0:21:60.21:0,60,1672
chr10	21101624	.	TAC	T	234.73	PASS	AB=0.817;AC=2;AF=0.040;AN=50;BaseQRankSum=7.462;DP=1277;FS=4.854;HRun=0;HaplotypeScore=143.8723;InbreedingCoeff=0.1481;MQ=48.78;MQ0=112;MQRankSum=-7.565;QD=3.31;ReadPosRankSum=-2.469;VQSLOD=2.3027;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:64,0:56:99:0,132,2189	0/0:4,3:7:0:0,0,0	0/0:23,0:6:6.02:0,6,92	0/0:29,0:10:21.06:0,21,305	./.	0/0:15,0:14:12.04:0,12,207	0/0:44,0:33:43.11:0,43,769	0/0:125,1:75:99:0,178,2850	0/0:54,0:52:99:0,125,2101	0/1:37,6:19:99:113,0,106	./.	0/0:63,0:58:99:0,141,2249	0/0:53,0:45:99:0,117,1906	0/0:54,0:51:99:0,144,2322	0/0:77,0:69:99:0,114,1742	0/0:69,0:62:99:0,169,2804	./.	0/0:40,0:40:99:0,99,1573	0/1:19,9:14:54.12:209,0,54	0/0:40,0:38:99:0,99,1652	0/0:112,0:100:99:0,244,4065	0/0:41,0:40:96.31:0,96,1600	0/0:36,0:32:84.24:0,84,1350	0/0:57,0:53:99:0,126,2122	0/0:45,0:40:99:0,99,1640	0/0:60,0:53:99:0,112,2166	0/0:33,0:30:81.18:0,81,1361	0/0:23,0:23:63.21:0,63,1045
chr10	21101640	.	CAT	C	241.94	PASS	AB=0.916;AC=4;AF=0.083;AN=48;BaseQRankSum=8.028;DP=1320;FS=11.398;HRun=0;HaplotypeScore=152.6229;InbreedingCoeff=0.2043;MQ=47.03;MQ0=135;MQRankSum=-5.146;QD=2.26;ReadPosRankSum=-3.386;VQSLOD=1.1109;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:62,0:54:99:0,129,2483	1/1:7,2:9:1.50:4,1,0	./.	0/0:14,0:6:7.80:0,8,94	./.	0/0:14,0:13:14.12:0,14,169	0/0:52,0:36:8.96:0,9,507	0/0:161,0:75:99:0,195,2942	0/0:57,0:53:99:0,144,2329	0/1:51,8:28:99:210,0,261	./.	0/0:60,0:54:99:0,122,2186	0/0:48,0:40:99:0,108,1907	0/0:52,0:49:99:0,144,2495	0/0:76,0:67:99:0,135,2184	0/0:60,0:52:99:0,146,2606	./.	0/0:42,0:41:99:0,105,1867	0/1:37,2:20:89.14:119,0,89	0/0:43,0:41:99:0,117,1914	0/0:118,0:100:99:0,265,4604	0/0:45,0:44:99:0,105,1846	0/0:41,0:36:69.04:0,69,1478	0/0:56,0:52:99:0,135,2247	0/0:48,0:43:99:0,110,1714	0/0:59,0:50:99:0,141,2481	0/0:33,0:30:87.19:0,87,1446	0/0:19,0:18:51.16:0,51,949
chr10	21101642	.	TAC	T	410	PASS	AB=0.966;AC=4;AF=0.083;AN=48;BaseQRankSum=6.267;DP=1326;FS=8.577;HRun=0;HaplotypeScore=152.2976;InbreedingCoeff=0.2961;MQ=46.91;MQ0=139;MQRankSum=-4.965;QD=2.63;ReadPosRankSum=-3.529;VQSLOD=1.0402;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:62,0:53:99:0,133,2211	0/0:9,0:9:2.50:0,2,9	./.	0/0:12,0:5:3.01:0,3,39	./.	0/0:13,0:13:7.44:0,7,132	0/1:53,2:37:99:186,0,263	0/0:160,0:72:99:0,158,2477	0/0:56,1:53:99:0,122,2058	0/1:57,2:28:99:125,0,313	./.	0/0:58,0:53:99:0,117,1987	0/0:46,0:39:99:0,102,1716	0/0:51,0:48:99:0,132,2242	0/0:76,0:67:99:0,132,2097	0/0:58,0:50:99:0,138,2281	./.	0/0:42,0:41:99:0,102,1679	1/1:38,4:21:5.92:202,6,0	0/0:44,0:42:99:0,108,1759	0/0:125,0:106:99:0,267,4246	0/0:46,0:45:99:0,99,1638	0/0:42,0:37:81.73:0,82,1347	0/0:56,0:52:99:0,120,2033	0/0:47,0:42:76.19:0,76,1474	0/0:60,0:49:99:0,128,2208	0/0:34,0:31:78.10:0,78,1238	0/0:19,0:18:48.16:0,48,831
chr10	21101683	.	ATG	A	1179.28	PASS	AB=0.827;AC=9;AF=0.173;AN=52;BaseQRankSum=10.872;DP=1069;FS=2.745;HRun=0;HaplotypeScore=136.6098;InbreedingCoeff=0.5214;MQ=51.04;MQ0=46;MQRankSum=-9.359;QD=10.62;ReadPosRankSum=-4.170;VQSLOD=2.5565;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:79,1:73:99:0,195,3753	1/1:1,6:7:9:98,9,0	0/1:9,1:7:27.54:28,0,193	0/1:11,2:8:56.43:56,0,215	./.	0/0:17,0:17:30.10:0,30,598	0/0:49,2:39:78.19:0,78,1491	0/0:71,1:46:87.76:0,88,1982	0/0:52,0:50:99:0,141,2729	0/1:31,22:42:91.28:980,0,91	./.	0/0:48,0:44:99:0,123,2357	0/0:34,1:33:92.20:0,92,1721	0/0:41,1:40:99:0,114,2204	0/0:61,1:59:51.46:0,51,2197	0/0:43,0:39:99:0,107,2120	1/1:6,6:8:8.85:74,9,0	0/0:34,0:34:98.65:0,99,1669	1/1:11,5:4:6.02:85,6,0	0/0:31,0:30:81.28:0,81,1583	0/0:106,0:97:99:0,223,4853	0/0:33,1:34:82.16:0,82,1552	0/0:33,1:33:96.31:0,96,1801	0/0:52,2:54:99:0,132,2451	0/0:34,0:34:84.29:0,84,1667	0/0:45,0:42:99:0,103,2143	0/0:26,0:25:71.71:0,72,1312	0/0:28,0:27:78.21:0,78,1396
chr10	21101684	.	TGCAC	T	219.62	PASS	AB=1.000;AC=7;AF=0.130;AN=54;BaseQRankSum=9.044;DP=1056;FS=0.709;HRun=0;HaplotypeScore=173.8159;InbreedingCoeff=0.4942;MQ=51.24;MQ0=44;MQRankSum=-6.924;QD=2.17;ReadPosRankSum=-4.512;VQSLOD=0.8778;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:79,0:73:99:0,185,5189	1/1:7,0:7:6.56:21,7,0	0/0:11,0:8:7.73:0,8,412	0/0:12,0:8:9.30:0,9,362	./.	0/0:17,0:17:30.03:0,30,863	0/0:50,1:39:78.13:0,78,2108	0/0:67,0:41:99:0,99,2312	0/0:51,0:49:99:0,142,3561	0/1:51,0:41:99:284,0,186	0/1:14,0:7:0:0,0,0	0/0:49,0:45:99:0,125,3170	0/0:35,0:34:96.25:0,96,2422	0/0:42,0:40:99:0,114,3007	0/0:56,6:59:83.68:0,84,3195	0/0:43,0:39:90.19:0,90,2713	1/1:12,0:8:2.42:17,2,0	0/0:33,0:33:75.15:0,75,2176	0/1:17,0:6:4.48:4,0,28	0/0:31,0:30:81.23:0,81,2097	0/0:103,0:95:99:0,259,6514	0/0:34,0:34:86.95:0,87,2023	0/0:34,0:33:93.24:0,93,2346	0/0:53,0:53:99:0,135,3218	0/0:33,0:33:84.25:0,84,2271	0/0:44,0:41:99:0,103,2896	0/0:25,0:24:69.18:0,69,1737	0/0:27,0:26:75.12:0,75,1622
chr10	21102942	.	CCTT	C	5116.57	PASS	AB=0.897;AC=13;AF=0.232;AN=56;BaseQRankSum=13.761;DP=718;FS=6.812;HRun=0;HaplotypeScore=108.2205;InbreedingCoeff=0.8850;MQ=86.06;MQ0=0;MQRankSum=-3.382;QD=31.58;ReadPosRankSum=-1.510;VQSLOD=4.8723;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,117,2517	1/1:0,13:13:32.83:538,33,0	0/0:30,0:30:80.75:0,81,1608	0/0:18,0:18:42.14:0,42,888	1/1:2,33:35:69.19:1095,69,0	0/0:24,0:24:69.24:0,69,1512	0/0:43,0:43:99:0,120,2639	0/0:26,0:26:72.23:0,72,1519	0/0:28,0:28:84.27:0,84,1801	1/1:2,39:41:99:1781,111,0	1/1:0,3:3:9.03:147,9,0	0/0:29,0:29:87.30:0,87,1926	0/0:25,0:25:72.25:0,72,1579	0/0:27,0:27:81.28:0,81,1810	0/0:27,0:27:72.25:0,72,1609	0/0:20,0:20:54.19:0,54,1198	1/1:0,20:20:54.18:882,54,0	0/0:23,0:23:69.24:0,69,1537	1/1:1,14:15:39.07:580,39,0	0/0:12,0:12:36.12:0,36,803	0/0:48,0:48:99:0,144,3198	0/0:25,0:25:72.25:0,72,1590	0/0:13,0:13:39.10:0,39,808	0/0:36,0:36:99:0,105,2346	0/0:32,0:32:78.27:0,78,1743	0/1:31,4:35:93.67:94,0,1893	0/0:26,0:26:75.26:0,75,1675	0/0:5,0:5:15.05:0,15,335
chr10	21103300	.	CT	C	4433.07	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=13.080;DP=661;FS=1.706;HRun=1;HaplotypeScore=64.9358;InbreedingCoeff=0.9989;MQ=79.52;MQ0=1;MQRankSum=-1.304;QD=37.57;ReadPosRankSum=-1.108;VQSLOD=4.8256;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,102,1630	1/1:0,9:9:27.09:377,27,0	0/0:22,0:22:62.55:0,63,824	0/0:15,0:14:42.14:0,42,645	1/1:0,23:23:60.20:813,60,0	0/0:24,0:24:72.25:0,72,1145	0/0:19,0:19:54.15:0,54,813	0/0:33,0:33:99:0,99,1477	0/0:23,0:23:69.20:0,69,1055	1/1:0,29:29:87.21:1139,87,0	1/1:0,8:8:21.07:293,21,0	0/0:39,0:39:99:0,114,1787	0/0:24,0:24:72.25:0,72,1148	0/0:16,0:16:48.16:0,48,760	0/0:36,0:36:99:0,108,1703	0/0:28,0:28:84.29:0,84,1331	1/1:0,30:30:78.26:1090,78,0	0/0:19,0:19:57.17:0,57,886	1/1:0,19:19:57.09:719,57,0	0/0:23,0:23:69.22:0,69,1081	0/0:26,0:25:69.19:0,69,1029	0/0:20,0:20:60.17:0,60,890	0/0:25,0:25:75.26:0,75,1193	0/0:21,0:21:63.20:0,63,979	0/0:30,0:30:90.30:0,90,1412	0/0:27,1:28:42.32:0,42,1227	0/0:23,0:23:69.22:0,69,1080	0/0:14,0:14:42.14:0,42,671
chr10	21104508	.	T	TA	6004.34	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=17.171;DP=810;FS=8.788;HRun=1;HaplotypeScore=97.0339;InbreedingCoeff=0.9991;MQ=74.24;MQ0=0;MQRankSum=-8.276;QD=40.57;ReadPosRankSum=-3.665;VQSLOD=2.9810;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,114,1480	1/1:0,8:8:21.07:314,21,0	0/0:16,0:16:38.69:0,39,477	0/0:14,0:14:38.96:0,39,473	1/1:1,24:25:66.05:887,66,0	0/0:13,0:13:39.11:0,39,491	0/0:41,0:41:99:0,120,1556	0/0:27,0:27:75.24:0,75,959	0/0:37,0:37:99:0,105,1361	1/1:2,46:47:99:2045,138,0	1/1:0,21:21:57.15:828,57,0	0/0:37,0:37:99:0,105,1341	0/0:34,0:34:99:0,99,1284	0/0:35,0:35:99:0,105,1362	0/0:54,0:54:99:0,160,2050	0/0:26,0:26:75.24:0,75,974	1/1:1,25:26:69.23:1034,69,0	0/0:21,0:21:63.20:0,63,815	1/1:0,20:20:60.20:895,60,0	0/0:29,0:29:87.27:0,87,1114	0/0:59,0:59:99:0,172,2217	0/0:22,0:22:60.18:0,60,764	0/0:14,0:14:39.13:0,39,506	0/0:29,0:29:87.28:0,87,1130	0/0:25,0:25:72.23:0,72,933	0/0:33,0:33:96.30:0,96,1232	0/0:30,0:30:87.27:0,87,1115	0/0:28,0:28:78.22:0,78,995
chr10	21104879	.	C	CTG	94.25	PASS	AB=0.775;AC=2;AF=0.037;AN=54;BaseQRankSum=5.263;DP=903;FS=0.000;HRun=0;HaplotypeScore=143.4759;InbreedingCoeff=0.2127;MQ=59.25;MQ0=20;MQRankSum=-1.845;QD=6.73;ReadPosRankSum=0.019;VQSLOD=3.2120;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:66,0:66:99:0,137,1721	./.	0/0:47,0:17:13.95:0,14,438	0/0:70,0:33:44.87:0,45,426	0/0:1,9:10:0.89:0,1,2	0/0:33,0:33:53.85:0,54,698	0/0:30,0:30:57.17:0,57,742	0/0:49,0:48:99:0,129,1649	0/0:37,0:37:81.59:0,82,1150	0/1:4,2:4:14.86:94,0,15	0/0:2,3:4:0.89:0,1,2	0/0:32,0:32:84.24:0,84,1074	0/0:29,0:29:75.09:0,75,891	0/0:31,0:31:87.22:0,87,1105	0/0:38,0:38:75.25:0,75,993	0/0:47,0:46:99:0,117,1485	0/1:6,2:6:24.77:88,0,25	0/0:26,0:26:40.33:0,40,671	0/0:3,1:2:2.98:0,3,21	0/0:38,0:38:87.18:0,87,1097	0/0:67,0:64:99:0,138,1750	0/0:29,0:29:72.22:0,72,943	0/0:18,0:18:45.10:0,45,577	0/0:51,0:51:99:0,108,1370	0/0:25,0:25:63.21:0,63,838	0/0:52,0:51:99:0,123,1556	0/0:25,0:25:70.47:0,70,920	0/0:24,0:24:53.18:0,53,672
chr10	21105108	.	C	CT	134	PASS	AB=0.733;AC=5;AF=0.096;AN=52;BaseQRankSum=5.797;DP=949;FS=29.312;HRun=0;HaplotypeScore=107.4029;InbreedingCoeff=0.2214;MQ=52.40;MQ0=63;MQRankSum=-5.486;QD=4.47;ReadPosRankSum=-1.879;VQSLOD=1.3934;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:64,0:61:99:0,138,1897	0/1:1,1:2:12.43:12,0,36	0/0:34,0:8:17.56:0,18,208	0/0:47,0:19:30.27:0,30,344	0/1:7,3:9:29.45:93,0,29	0/0:30,0:23:51.09:0,51,690	0/0:38,0:27:59.37:0,59,777	0/0:43,0:34:93.31:0,93,1296	0/0:35,0:35:92.70:0,93,1263	0/1:11,5:8:21.58:104,0,22	1/1:2,0:2:3.01:34,3,0	0/0:44,0:42:96.28:0,96,1303	0/0:50,0:47:99:0,129,1754	0/0:33,0:33:90.30:0,90,1255	0/0:43,0:43:93.20:0,93,1264	0/0:47,0:44:99:0,117,1612	./.	0/0:28,0:27:75.21:0,75,1009	./.	0/0:41,0:39:87.19:0,87,1170	0/0:83,0:69:99:0,149,2036	0/0:43,0:39:93.31:0,93,1299	0/0:33,0:31:63.14:0,63,853	0/0:62,0:58:99:0,129,1726	0/0:35,0:31:81.14:0,81,1062	0/0:39,0:32:93.31:0,93,1293	0/0:23,0:21:53.99:0,54,683	0/0:15,0:13:33.11:0,33,461
chr10	21105173	.	GTC	G	847.42	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=8.358;DP=922;FS=42.863;HRun=0;HaplotypeScore=150.6621;InbreedingCoeff=0.8380;MQ=58.24;MQ0=6;MQRankSum=-6.641;QD=14.61;ReadPosRankSum=-0.065;VQSLOD=1.6881;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:60,0:59:99:0,168,2891	1/1:0,5:6:6.02:86,6,0	0/0:45,0:27:71.86:0,72,1111	0/0:50,0:26:44.31:0,44,719	1/1:1,12:13:3.01:43,3,0	0/0:34,0:34:96.09:0,96,1569	0/0:29,0:29:75.14:0,75,1169	0/0:53,0:53:99:0,141,2458	0/0:35,0:34:90.29:0,90,1588	1/1:2,21:22:50.97:696,51,0	1/1:0,11:11:6.02:85,6,0	0/0:31,0:31:87.24:0,87,1487	0/0:39,0:39:99:0,117,2065	0/0:33,0:33:87.30:0,87,1579	0/0:44,0:44:99:0,114,1918	0/0:41,0:41:99:0,114,1983	0/0:1,0:1:3.01:0,3,47	0/0:37,0:37:99:0,105,1789	1/1:2,3:3:6.02:86,6,0	0/0:29,0:29:84.26:0,84,1459	0/0:79,0:75:99:0,196,3328	0/0:40,0:40:99:0,114,1894	0/0:23,0:23:69.21:0,69,1195	0/0:52,0:52:99:0,123,2164	0/0:33,0:33:93.19:0,93,1484	0/0:33,0:33:66.55:0,67,1581	0/0:27,0:27:78.24:0,78,1393	0/0:16,0:16:48.16:0,48,868
chr10	21107240	.	CTATGTGT	C	7974.05	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=16.076;DP=621;FS=4.132;HRun=0;HaplotypeScore=156.9248;InbreedingCoeff=0.9998;MQ=86.06;MQ0=0;MQRankSum=-14.601;QD=59.96;ReadPosRankSum=-0.720;VQSLOD=4.8301;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:72.16:0,72,2636	1/1:1,14:15:30.10:807,30,0	0/0:26,0:26:75.24:0,75,2836	0/0:19,0:19:46.99:0,47,1959	1/1:2,16:18:41.97:912,42,0	0/0:20,0:20:60.21:0,60,2351	0/0:15,0:15:45.15:0,45,1807	0/0:31,0:31:93.30:0,93,3365	0/0:12,0:12:36.12:0,36,1474	1/1:1,28:29:78.67:1989,79,0	1/1:1,37:38:99:2484,99,0	0/0:26,0:26:78.27:0,78,3096	0/0:29,0:29:84.27:0,84,3256	0/0:23,0:23:69.24:0,69,2741	0/0:31,0:31:93.32:0,93,3737	0/0:20,0:20:57.20:0,57,2252	1/1:1,19:19:42.14:1129,42,0	0/0:21,0:21:60.21:0,60,2396	1/1:1,11:13:32.99:653,33,0	0/0:17,0:17:48.16:0,48,1895	0/0:21,0:21:63.22:0,63,2550	0/0:16,0:16:48.16:0,48,1954	0/0:17,0:17:51.18:0,51,2035	0/0:19,0:19:57.20:0,57,2277	0/0:26,0:26:75.26:0,75,3008	0/0:34,0:34:99:0,102,4056	0/0:24,0:24:72.23:0,72,2828	0/0:16,0:16:48.16:0,48,1927
chr10	21107496	.	ATGCCTGCCTGCCTGCC	A	4949.27	PASS	AB=0.909;AC=13;AF=0.232;AN=56;BaseQRankSum=11.948;DP=629;FS=10.075;HRun=0;HaplotypeScore=263.5240;InbreedingCoeff=0.8819;MQ=59.96;MQ0=1;MQRankSum=-5.923;QD=35.61;ReadPosRankSum=-0.181;VQSLOD=1.8745;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:26:66.21:0,66,4365	1/1:0,8:8:18.06:754,18,0	0/0:23,0:17:24.06:0,24,555	0/0:29,0:27:44.50:0,45,1787	1/1:4,13:17:18.81:435,19,0	0/0:13,0:13:33.11:0,33,1581	0/0:34,0:34:93.28:0,93,5659	0/0:29,0:29:54.16:0,54,2657	0/0:20,0:20:48.16:0,48,3077	1/1:7,23:30:60.09:1895,60,0	1/1:5,12:17:23.84:533,24,0	0/0:23,0:23:57.18:0,57,3902	0/0:29,0:29:72.22:0,72,4235	0/0:19,0:19:48.14:0,48,2867	0/0:28,0:28:63.18:0,63,3964	0/0:22,0:22:57.16:0,57,3396	1/1:9,24:33:15.05:671,15,0	0/0:34,0:34:78.23:0,78,4701	1/1:6,8:14:24.02:567,24,0	0/0:10,0:10:15.05:0,15,1128	0/0:57,0:57:99:0,144,7718	0/0:12,0:12:26.30:0,26,1531	0/0:5,0:5:12.04:0,12,668	0/0:43,0:43:96.30:0,96,6432	0/0:10,0:10:18.06:0,18,1129	0/1:18,2:20:94.03:94,0,2008	0/0:15,0:15:33.10:0,33,2321	0/0:8,0:8:24.07:0,24,1476
chr10	21108838	.	C	CA	5512.69	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=15.207;DP=683;FS=0.368;HRun=0;HaplotypeScore=76.1719;InbreedingCoeff=0.9999;MQ=84.77;MQ0=0;MQRankSum=-2.065;QD=45.19;ReadPosRankSum=-1.011;VQSLOD=4.4794;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:75.25:0,75,1049	1/1:0,15:15:45.15:719,45,0	0/0:25,0:25:72.21:0,72,962	0/0:17,0:17:42.13:0,42,561	1/1:1,23:24:66.22:1054,66,0	0/0:29,0:29:87.26:0,87,1180	0/0:25,0:25:75.25:0,75,1047	0/0:23,0:23:66.21:0,66,908	0/0:25,0:25:75.25:0,75,1047	1/1:0,25:25:75.23:1165,75,0	1/1:0,20:20:54.18:863,54,0	0/0:27,0:27:81.27:0,81,1130	0/0:25,0:25:72.23:0,72,990	0/0:29,0:29:84.27:0,84,1158	0/0:34,0:34:99:0,102,1406	0/0:37,0:37:99:0,102,1408	1/1:0,13:13:39.13:623,39,0	0/0:12,0:12:30.10:0,30,420	1/1:1,24:25:69.23:1089,69,0	0/0:30,0:30:84.27:0,84,1158	0/0:26,0:26:78.26:0,78,1091	0/0:30,0:30:90.30:0,90,1258	0/0:19,0:19:57.17:0,57,777	0/0:24,0:24:72.22:0,72,987	0/0:29,0:29:87.25:0,87,1180	0/0:27,0:27:78.26:0,78,1090	0/0:28,0:28:84.25:0,84,1139	0/0:13,0:13:39.13:0,39,545
chr10	21109596	.	A	ACAACAACAACAAC	10753.91	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-8.571;DP=591;FS=3.998;HRun=0;HaplotypeScore=192.1249;InbreedingCoeff=0.9397;MQ=66.21;MQ0=1;MQRankSum=-3.696;QD=88.15;ReadPosRankSum=-1.720;VQSLOD=4.5494;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:26:6.12:0,6,2269	1/1:0,4:8:18.06:1030,18,0	0/0:28,0:20:59.54:0,60,1454	0/0:29,0:21:38.56:0,39,1066	1/1:0,12:22:39.04:1720,39,0	0/0:19,0:19:57.19:0,57,1941	0/0:18,0:18:51.17:0,51,1660	0/0:28,0:28:84.25:0,84,2262	0/0:19,0:19:57.19:0,57,2048	1/1:0,15:20:51.16:2473,51,0	1/1:0,21:29:54.11:3091,54,0	0/0:12,0:12:36.11:0,36,1318	0/0:26,0:26:78.22:0,78,2311	0/0:17,0:17:51.17:0,51,1850	0/0:17,0:17:51.17:0,51,1683	0/0:24,0:24:72.23:0,72,2826	1/1:0,7:18:2.84:199,3,0	0/0:29,0:29:84.76:0,85,3074	1/1:0,11:25:75.23:2241,75,0	0/0:32,0:32:93.32:0,93,3001	0/0:7,0:7:21.05:0,21,595	0/0:21,0:21:63.15:0,63,2078	0/0:23,0:23:66.21:0,66,2339	0/0:13,0:13:36.11:0,36,1326	0/0:20,0:20:60.20:0,60,2193	0/0:18,0:18:54.18:0,54,1912	0/0:33,0:33:99:0,99,3393	0/0:10,0:10:30.10:0,30,1144
chr10	21109873	.	CA	C	4132.31	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=12.243;DP=655;FS=10.567;HRun=1;HaplotypeScore=70.6275;InbreedingCoeff=0.9996;MQ=82.76;MQ0=0;MQRankSum=-2.680;QD=37.91;ReadPosRankSum=1.762;VQSLOD=3.7576;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:57.19:0,57,911	1/1:0,9:9:27.09:376,27,0	0/0:27,0:27:81.23:0,81,1265	0/0:25,0:25:57.17:0,57,967	1/1:0,20:20:51.13:684,51,0	0/0:28,0:28:84.24:0,84,1270	0/0:14,0:14:42.14:0,42,668	0/0:39,0:39:99:0,117,1769	0/0:20,0:20:60.18:0,60,913	1/1:0,18:18:51.11:672,51,0	1/1:0,17:17:48.16:659,48,0	0/0:20,0:20:60.20:0,60,955	0/0:19,0:19:57.18:0,57,879	0/0:35,0:35:99:0,105,1627	0/0:38,0:38:99:0,114,1771	0/0:24,0:24:72.23:0,72,1126	1/1:0,26:26:72.24:1004,72,0	0/0:20,0:20:60.16:0,60,925	1/1:0,19:19:54.17:738,54,0	0/0:29,0:29:87.25:0,87,1340	0/0:17,0:17:51.17:0,51,813	0/0:20,0:20:60.19:0,60,921	0/0:23,0:23:69.22:0,69,1080	0/0:24,0:24:65.51:0,66,1050	0/0:30,0:30:90.31:0,90,1437	0/0:29,1:30:48.82:0,49,1329	0/0:33,0:33:99:0,99,1524	0/0:9,0:9:27.07:0,27,406
chr10	21110067	.	CAAG	C	1746.59	PASS	AB=0.770;AC=6;AF=0.107;AN=56;BaseQRankSum=9.844;DP=687;FS=1.772;HRun=0;HaplotypeScore=148.1303;InbreedingCoeff=0.0200;MQ=74.30;MQ0=2;MQRankSum=-9.755;QD=14.32;ReadPosRankSum=-4.865;VQSLOD=2.7128;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:87.26:0,87,1892	0/1:9,5:14:49.61:285,0,50	0/0:32,0:32:90.57:0,91,1927	0/0:17,0:17:48.15:0,48,975	0/1:16,9:25:48.27:389,0,48	0/0:33,0:33:99:0,99,2263	0/0:15,0:15:42.14:0,42,924	0/0:28,0:28:81.27:0,81,1791	0/0:21,0:21:63.22:0,63,1441	0/1:22,6:27:94.52:302,0,95	0/1:18,4:22:99:285,0,109	0/0:27,0:27:78.23:0,78,1691	0/0:30,0:30:87.30:0,87,1976	0/0:30,0:30:87.30:0,87,1968	0/0:35,0:35:99:0,102,2311	0/0:27,0:27:78.27:0,78,1766	0/1:12,3:14:48.89:167,0,49	0/0:15,0:15:42.04:0,42,914	0/1:8,10:18:1.30:444,0,1	0/0:26,0:26:72.25:0,72,1659	0/0:32,0:32:93.30:0,93,2038	0/0:29,0:29:87.27:0,87,1905	0/0:27,0:27:81.25:0,81,1765	0/0:25,0:25:75.23:0,75,1657	0/0:24,0:24:69.22:0,69,1544	0/0:26,0:26:74.98:0,75,1559	0/0:28,0:28:84.25:0,84,1845	0/0:9,0:9:27.09:0,27,622
chr10	21110069	.	A	AAATT	5013.45	PASS	AB=0.800;AC=11;AF=0.196;AN=56;BaseQRankSum=14.593;DP=675;FS=6.057;HRun=0;HaplotypeScore=147.7078;InbreedingCoeff=0.8512;MQ=74.76;MQ0=2;MQRankSum=-13.243;QD=44.37;ReadPosRankSum=-1.128;VQSLOD=5.1411;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:87.30:0,87,1779	1/1:6,8:14:41.67:779,42,0	0/0:35,0:35:91.43:0,91,1819	0/0:17,0:17:44.47:0,44,868	1/1:11,13:24:47.37:921,47,0	0/0:33,0:33:99:0,99,2072	0/0:15,0:15:45.14:0,45,888	0/0:27,0:27:81.28:0,81,1663	0/0:21,0:21:63.22:0,63,1315	1/1:9,14:25:39.11:1232,39,0	1/1:4,16:20:50.56:1178,51,0	0/0:26,0:26:78.27:0,78,1590	0/0:29,0:29:87.30:0,87,1818	0/0:29,0:29:87.30:0,87,1823	0/0:35,0:35:99:0,102,2133	0/0:28,0:28:78.27:0,78,1627	1/1:5,7:12:17.23:482,17,0	0/0:14,0:14:42.14:0,42,856	0/1:12,4:16:18.81:422,0,19	0/0:24,0:24:72.25:0,72,1509	0/0:31,0:31:93.30:0,93,1885	0/0:30,0:30:87.27:0,87,1741	0/0:27,0:27:81.25:0,81,1614	0/0:25,0:25:75.23:0,75,1513	0/0:23,0:23:69.24:0,69,1426	0/0:24,1:25:2.93:0,3,1385	0/0:30,0:30:90.28:0,90,1788	0/0:9,0:9:27.09:0,27,566
chr10	21110070	.	G	GAAGGA	6814.21	PASS	AB=0.721;AC=7;AF=0.125;AN=56;BaseQRankSum=13.590;DP=711;FS=2.884;HRun=0;HaplotypeScore=177.3669;InbreedingCoeff=-0.0244;MQ=73.27;MQ0=2;MQRankSum=-13.761;QD=39.85;ReadPosRankSum=-1.892;VQSLOD=4.1287;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:87.30:0,87,1820	0/1:7,8:16:41.56:797,0,42	0/0:36,0:36:99:0,100,1962	0/0:17,0:17:38.25:0,38,858	0/1:16,13:29:18.78:1066,0,19	0/0:33,0:33:99:0,99,2148	0/0:15,0:15:42.14:0,42,890	0/0:28,0:28:78.27:0,78,1656	0/0:21,0:21:63.21:0,63,1330	0/1:18,15:33:63.42:1866,0,63	0/1:9,16:25:2.10:1500,0,2	0/0:26,0:26:78.25:0,78,1614	0/0:29,0:29:87.28:0,87,1848	0/0:29,0:29:87.30:0,87,1886	0/0:35,0:35:99:0,105,2217	0/0:28,0:28:81.25:0,81,1677	0/1:10,7:18:51.81:808,0,52	0/0:14,0:14:42.14:0,42,893	0/1:16,4:22:99:769,0,162	0/0:25,0:25:72.25:0,72,1544	0/0:31,0:31:87.28:0,87,1807	0/0:30,0:30:84.26:0,84,1725	0/0:27,0:27:75.25:0,75,1590	0/0:25,0:25:69.24:0,69,1495	0/0:23,0:23:69.24:0,69,1459	0/1:25,1:26:8.33:8,0,1408	0/0:30,0:30:90.31:0,90,1871	0/0:9,0:9:27.09:0,27,586
chr10	21111360	.	T	TTTATTC	6105.45	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=-0.592;DP=397;FS=3.613;HRun=0;HaplotypeScore=99.8021;InbreedingCoeff=0.8429;MQ=61.01;MQ0=0;MQRankSum=-8.236;QD=55.50;ReadPosRankSum=0.284;VQSLOD=4.7909;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:23:63.20:0,63,1360	1/1:1,4:6:5.87:215,6,0	0/1:9,0:5:18.59:19,0,149	0/0:11,0:9:26.57:0,27,439	1/1:7,8:19:28.26:776,28,0	0/0:11,0:11:33.11:0,33,780	0/0:10,0:10:24.04:0,24,486	0/0:26,0:26:75.25:0,75,1622	0/0:10,0:10:30.10:0,30,666	1/1:1,11:22:63.19:1724,63,0	1/1:4,7:16:38.98:1190,39,0	0/0:11,0:11:33.11:0,33,786	0/0:14,0:14:42.13:0,42,958	0/0:8,0:8:21.07:0,21,484	0/0:11,0:11:33.11:0,33,753	0/0:14,0:14:33.10:0,33,669	1/1:12,2:16:19.29:928,19,0	0/0:13,0:13:33.11:0,33,760	1/1:8,8:20:33.43:1253,33,0	0/0:20,0:20:54.17:0,54,1214	0/0:7,0:7:21.07:0,21,483	0/0:5,0:5:2.76:0,3,208	0/0:9,0:9:27.08:0,27,563	0/0:14,0:14:42.11:0,42,882	0/0:15,0:15:42.14:0,42,1008	0/0:24,0:24:70.82:0,71,1539	0/0:20,0:20:57.18:0,57,1240	0/0:10,0:10:30.10:0,30,719
chr10	21111445	.	A	AC	2436.11	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=-9.408;DP=406;FS=0.477;HRun=7;HaplotypeScore=60.2661;InbreedingCoeff=0.8503;MQ=64.15;MQ0=3;MQRankSum=3.862;QD=23.65;ReadPosRankSum=1.165;VQSLOD=3.8356;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:45.06:0,45,434	1/1:0,2:2:3.01:36,3,0	0/1:15,0:11:25.11:25,0,127	0/0:11,0:7:12.01:0,12,114	1/1:0,15:15:45.14:543,45,0	0/0:13,0:13:33.04:0,33,314	0/0:14,0:13:36.05:0,36,342	0/0:20,0:20:48.06:0,48,459	0/0:9,0:9:24.03:0,24,226	1/1:3,15:18:45.14:544,45,0	1/1:1,17:18:48.06:560,48,0	0/0:9,0:9:27.04:0,27,260	0/0:6,0:6:12.02:0,12,116	0/0:9,0:9:24.04:0,24,231	0/0:14,0:14:38.74:0,39,358	0/0:12,0:12:30.03:0,30,282	1/1:4,17:19:48.15:580,48,0	0/0:15,0:15:35.98:0,36,331	1/1:4,10:12:30.03:333,30,0	0/0:18,0:18:54.07:0,54,515	0/0:15,0:15:39.06:0,39,377	0/0:7,0:7:18.03:0,18,174	0/0:16,0:16:48.07:0,48,459	0/0:14,0:14:33.05:0,33,318	0/0:12,0:12:30.05:0,30,289	0/0:28,0:28:69.10:0,69,666	0/0:17,0:17:42.06:0,42,405	0/0:19,0:19:39.05:0,39,377
chr10	21111522	.	CT	C	6398.03	PASS	AB=0.979;AC=40;AF=0.714;AN=56;BaseQRankSum=11.272;DP=468;FS=1.275;HRun=10;HaplotypeScore=115.2857;InbreedingCoeff=0.8241;MQ=74.59;MQ0=0;MQRankSum=-8.516;QD=19.69;ReadPosRankSum=0.500;VQSLOD=4.2693;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,13:15:32.96:286,33,0	0/0:5,0:5:15.04:0,15,166	0/1:22,1:20:15.25:15,0,164	0/1:14,0:13:8.05:8,0,124	0/0:35,0:35:91.49:0,91,998	1/1:1,16:18:50.03:422,50,0	1/1:0,15:14:41.99:365,42,0	1/1:7,17:24:50.98:443,51,0	1/1:3,14:17:38.98:338,39,0	0/0:23,0:23:63.17:0,63,697	0/0:21,1:22:28.04:0,28,519	1/1:1,14:15:38.99:338,39,0	1/1:1,20:21:56.98:494,57,0	1/1:2,6:8:18:157,18,0	0/0:19,0:20:56.97:0,57,599	1/1:1,15:17:44.03:370,44,0	0/0:20,0:20:48.10:0,48,518	1/1:0,7:7:21:182,21,0	0/0:17,1:18:21.10:0,21,445	1/1:0,21:21:59.98:521,60,0	1/1:3,4:7:12:104,12,0	1/1:0,8:8:24:208,24,0	1/1:1,17:18:50.98:442,51,0	1/1:1,5:6:12:104,12,0	1/1:1,12:13:35.99:313,36,0	1/1:3,20:23:59.93:513,60,0	1/1:2,25:27:41.79:591,42,0	1/1:1,7:8:21:182,21,0
chr10	21111570	.	T	TC	11339.82	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=16.925;DP=452;FS=2.684;HRun=0;HaplotypeScore=168.8006;InbreedingCoeff=0.9500;MQ=62.45;MQ0=2;MQRankSum=-16.030;QD=42.31;ReadPosRankSum=3.377;VQSLOD=4.2355;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,11:11:30.08:456,30,0	0/0:9,0:9:27.09:0,27,373	0/0:21,0:18:36.10:0,36,426	0/0:11,0:9:12.84:0,13,242	0/0:32,0:32:96.30:0,96,1308	1/1:1,15:16:48.05:678,48,0	1/1:1,10:10:30.03:431,30,0	1/1:1,21:21:63.21:976,63,0	1/1:0,16:16:45.15:696,45,0	0/0:30,0:30:90.29:0,90,1236	0/0:20,0:20:57.18:0,57,781	1/1:1,15:16:45.15:698,45,0	1/1:0,14:14:42.14:632,42,0	1/1:0,17:17:51.17:749,51,0	0/0:21,0:21:63.21:0,63,881	1/1:0,12:12:36.12:537,36,0	0/0:24,0:24:72.19:0,72,952	1/1:1,4:5:11.99:184,12,0	0/0:15,0:15:42.11:0,42,538	1/1:0,24:24:72.17:1057,72,0	1/1:0,1:1:3.01:36,3,0	1/1:0,16:16:48.16:746,48,0	1/1:1,20:21:59.92:801,60,0	1/1:0,4:4:9.03:118,9,0	1/1:1,9:10:30.02:368,30,0	1/1:1,22:23:27.27:1003,27,0	1/1:1,24:24:68.90:997,69,0	1/1:0,4:4:12.04:177,12,0
chr10	21111578	.	ATTTT	A	9682.15	PASS	AB=0.517;AC=33;AF=0.635;AN=52;BaseQRankSum=15.834;DP=364;FS=2.982;HRun=5;HaplotypeScore=177.5603;InbreedingCoeff=0.8844;MQ=64.54;MQ0=2;MQRankSum=-15.565;QD=52.91;ReadPosRankSum=6.986;VQSLOD=2.5808;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:0,9:9:27.09:478,27,0	0/0:7,0:7:21.07:0,21,556	0/0:20,0:17:27.75:0,28,978	0/0:14,0:10:24.04:0,24,526	0/0:32,0:32:96.33:0,96,2547	1/1:0,11:11:33.11:594,33,0	1/1:0,7:7:21.07:378,21,0	1/1:0,8:8:24.08:433,24,0	1/1:0,13:13:39.13:702,39,0	0/0:24,0:24:69.23:0,69,1849	0/0:18,0:18:54.18:0,54,1415	1/1:1,13:14:42.14:752,42,0	1/1:0,8:8:24.08:433,24,0	1/1:0,13:13:39.13:703,39,0	0/0:23,0:23:66.23:0,66,1803	1/1:0,8:8:24.08:436,24,0	0/0:25,0:25:75.20:0,75,1960	1/1:0,2:2:6.02:108,6,0	0/0:18,0:18:54.18:0,54,1455	1/1:0,20:20:60.21:1081,60,0	./.	1/1:0,15:15:45.15:813,45,0	1/1:0,16:16:48.06:814,48,0	./.	1/1:0,3:3:9.03:162,9,0	0/1:1,14:15:38.82:712,0,39	1/1:0,17:17:48.16:866,48,0	1/1:0,4:4:12.04:216,12,0
chr10	21113249	.	A	ATT	5355.73	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=12.641;DP=549;FS=19.068;HRun=7;HaplotypeScore=74.9811;InbreedingCoeff=0.9958;MQ=73.29;MQ0=0;MQRankSum=-1.791;QD=38.53;ReadPosRankSum=1.660;VQSLOD=3.4662;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:33.08:0,33,373	1/1:2,7:9:18.06:295,18,0	0/0:20,0:18:29.23:0,29,300	0/0:20,0:15:17.66:0,18,257	1/1:4,26:31:69.23:1099,69,0	0/0:25,0:25:60.13:0,60,677	0/0:14,0:14:39.11:0,39,454	0/0:32,0:32:84.23:0,84,979	0/0:20,0:20:54.14:0,54,617	1/1:2,22:24:66.23:1074,66,0	1/1:3,21:24:57.11:875,57,0	0/0:14,0:14:36.10:0,36,420	0/0:14,0:14:36.11:0,36,419	0/0:11,0:11:33.08:0,33,372	0/0:20,0:20:48.14:0,48,559	0/0:26,0:26:72.19:0,72,827	1/1:2,16:18:45.15:738,45,0	0/0:13,0:13:33.09:0,33,383	1/1:6,26:33:78.27:1274,78,0	0/0:29,0:29:81.24:0,81,943	0/0:12,0:12:36.11:0,36,419	0/0:18,0:18:48.14:0,48,559	0/0:23,0:23:63.19:0,63,733	0/0:8,0:8:24.07:0,24,280	0/0:25,0:25:69.19:0,69,804	0/0:18,0:18:45.13:0,45,524	0/0:25,0:25:66.19:0,66,768	0/0:12,0:12:36.07:0,36,395
chr10	21113598	.	GA	G	3761.99	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=15.854;DP=633;FS=1.213;HRun=7;HaplotypeScore=85.2695;InbreedingCoeff=0.9991;MQ=89.92;MQ0=0;MQRankSum=-2.904;QD=25.59;ReadPosRankSum=2.545;VQSLOD=4.2533;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:60.18:0,60,741	1/1:1,8:9:24.05:245,24,0	0/0:30,0:29:63.05:0,63,700	0/0:21,0:21:31.92:0,32,420	1/1:2,30:32:84.19:857,84,0	0/0:31,0:31:93.26:0,93,1153	0/0:29,0:29:72.23:0,72,906	0/0:34,0:34:99:0,99,1190	0/0:24,0:24:66.21:0,66,830	1/1:6,35:41:99:1070,105,0	1/1:1,21:22:54.12:551,54,0	0/0:21,0:21:57.18:0,57,717	0/0:20,0:20:60.18:0,60,742	0/0:10,0:10:24.08:0,24,302	0/0:12,0:12:36.12:0,36,453	0/0:16,0:16:46.38:0,46,558	1/1:6,16:22:41.60:428,42,0	0/0:17,0:17:48.12:0,48,587	1/1:1,20:21:60.14:611,60,0	0/0:28,0:28:69.21:0,69,856	0/0:18,0:18:54.13:0,54,661	0/0:26,0:26:75.22:0,75,929	0/0:35,0:35:99:0,102,1243	0/0:22,0:22:60.19:0,60,755	0/0:17,0:17:51.16:0,51,641	0/0:18,0:18:54.17:0,54,679	0/0:24,0:24:69.22:0,69,868	0/0:13,0:13:39.12:0,39,490
chr10	21113743	.	C	CA	7734.73	PASS	AB=1.000;AC=52;AF=0.929;AN=56;BaseQRankSum=-3.015;DP=494;FS=5.658;HRun=10;HaplotypeScore=76.8389;InbreedingCoeff=0.5356;MQ=77.29;MQ0=3;MQRankSum=-4.131;QD=16.08;ReadPosRankSum=1.805;VQSLOD=5.3209;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,14:19:13.47:324,13,0	1/1:2,0:6:6.15:30,6,0	0/1:13,0:15:1.55:2,0,111	0/1:11,0:8:13.18:13,0,41	1/1:5,0:29:62.17:321,62,0	1/1:2,16:18:30.08:320,30,0	1/1:7,11:18:33.62:423,34,0	1/1:8,23:32:42.27:603,42,0	1/1:2,8:10:9.02:96,9,0	1/1:5,1:23:46.53:255,47,0	1/1:7,1:24:30.79:165,31,0	1/1:1,8:10:30.06:307,30,0	1/1:4,14:18:11.30:319,11,0	1/1:3,9:14:23.73:220,24,0	0/0:13,0:13:23.93:0,24,194	1/1:2,15:17:33.08:352,33,0	1/1:4,0:21:33.96:170,34,0	1/1:5,6:11:21.02:213,21,0	1/1:8,0:19:35.77:211,36,0	1/1:7,21:29:62.81:594,63,0	1/1:2,13:15:24.06:256,24,0	1/1:3,3:6:10.79:100,11,0	1/1:7,12:20:45.64:436,46,0	1/1:1,7:8:15.04:160,15,0	1/1:2,18:20:33.08:352,33,0	1/1:7,14:22:14.29:331,14,0	1/1:12,13:26:65.93:651,66,0	1/1:0,16:16:48.12:512,48,0
chr10	21113924	.	CA	C	3939.63	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=16.058;DP=651;FS=6.186;HRun=3;HaplotypeScore=79.8225;InbreedingCoeff=0.9990;MQ=90.33;MQ0=0;MQRankSum=-3.609;QD=33.11;ReadPosRankSum=0.752;VQSLOD=4.0364;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:93.31:0,93,1339	1/1:1,8:9:23.74:271,24,0	0/0:27,0:27:61.64:0,62,1048	0/0:24,0:24:60.53:0,61,813	1/1:1,21:22:54.08:646,54,0	0/0:19,0:19:51.17:0,51,734	0/0:21,0:21:60.20:0,60,861	0/0:31,0:31:90.29:0,90,1262	0/0:26,0:26:78.25:0,78,1103	1/1:1,18:19:57.13:681,57,0	1/1:1,19:20:54.17:669,54,0	0/0:24,0:24:72.20:0,72,1013	0/0:31,0:31:87.27:0,87,1218	0/0:25,0:25:72.24:0,72,1037	0/0:26,0:26:78.26:0,78,1122	0/0:15,0:15:45.15:0,45,648	1/1:0,25:25:72.23:892,72,0	0/0:10,0:10:30.10:0,30,432	1/1:3,21:23:63.20:780,63,0	0/0:28,0:28:84.27:0,84,1182	0/0:26,0:26:78.26:0,78,1123	0/0:24,0:24:72.23:0,72,1018	0/0:27,0:27:81.26:0,81,1149	0/0:27,0:27:81.26:0,81,1148	0/0:22,0:22:63.17:0,63,866	0/0:31,1:32:56.11:0,56,1242	0/0:27,0:27:81.26:0,81,1146	0/0:8,0:8:24.05:0,24,323
chr10	21114099	.	ACT	A	6461.03	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=14.220;DP=737;FS=1.988;HRun=0;HaplotypeScore=89.9440;InbreedingCoeff=0.9991;MQ=90.69;MQ0=1;MQRankSum=-3.924;QD=45.18;ReadPosRankSum=0.824;VQSLOD=6.1248;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,138,2789	1/1:0,10:10:24.08:391,24,0	0/0:30,0:30:69.63:0,70,1638	0/0:28,0:28:75.73:0,76,1502	1/1:0,35:35:93.32:1517,93,0	0/0:23,0:23:66.23:0,66,1340	0/0:23,0:23:69.22:0,69,1362	0/0:27,0:27:78.27:0,78,1576	0/0:24,0:24:69.24:0,69,1402	1/1:0,33:33:96.33:1567,96,0	1/1:0,25:25:72.25:1174,72,0	0/0:25,0:25:75.26:0,75,1519	0/0:30,0:30:90.28:0,90,1735	0/0:30,0:30:87.30:0,87,1752	0/0:34,0:34:99:0,102,2027	0/0:21,0:21:63.22:0,63,1249	1/1:0,22:22:63.22:1028,63,0	0/0:15,0:15:39.09:0,39,728	1/1:0,18:17:51.16:784,51,0	0/0:31,0:31:93.32:0,93,1853	0/0:42,0:42:99:0,123,2478	0/0:19,0:19:57.20:0,57,1146	0/0:27,0:27:81.28:0,81,1586	0/0:31,0:31:93.32:0,93,1883	0/0:13,0:12:39.13:0,39,792	0/0:31,1:32:47.37:0,47,1824	0/0:34,0:34:99:0,102,2033	0/0:8,0:8:24.08:0,24,487
chr10	21114366	.	CA	C	5751.88	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=14.278;DP=612;FS=6.617;HRun=2;HaplotypeScore=56.3614;InbreedingCoeff=0.9994;MQ=81.31;MQ0=0;MQRankSum=-1.023;QD=38.35;ReadPosRankSum=1.548;VQSLOD=5.3899;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:72.24:0,72,1079	1/1:0,11:11:33.11:428,33,0	0/0:20,0:20:57.64:0,58,833	0/0:12,0:12:27.09:0,27,394	1/1:0,43:43:99:1636,126,0	0/0:25,0:25:75.24:0,75,1104	0/0:13,0:13:39.13:0,39,585	0/0:40,0:40:99:0,117,1718	0/0:15,0:15:45.15:0,45,670	1/1:0,29:29:87.28:1129,87,0	1/1:0,23:23:69.22:896,69,0	0/0:24,0:24:72.24:0,72,1079	0/0:17,0:17:51.17:0,51,743	0/0:24,0:24:72.24:0,72,1079	0/0:32,0:32:96.31:0,96,1418	0/0:24,0:24:72.23:0,72,1060	1/1:0,28:28:81.26:1052,81,0	0/0:11,0:11:33.11:0,33,488	1/1:0,16:16:48.15:611,48,0	0/0:23,0:23:63.21:0,63,937	0/0:14,0:14:42.14:0,42,629	0/0:22,0:22:63.19:0,63,907	0/0:20,0:20:60.20:0,60,899	0/0:15,0:15:45.14:0,45,649	0/0:22,0:22:66.22:0,66,964	0/0:23,1:24:27.25:0,27,906	0/0:29,0:29:87.29:0,87,1304	0/0:12,0:12:30.10:0,30,446
chr10	21115553	.	A	AAT	1128.74	PASS	AB=0.889;AC=14;AF=0.250;AN=56;BaseQRankSum=1.125;DP=529;FS=0.510;HRun=0;HaplotypeScore=102.6839;InbreedingCoeff=0.4851;MQ=73.44;MQ0=6;MQRankSum=0.076;QD=8.82;ReadPosRankSum=-1.107;VQSLOD=2.8781;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:20.83:0,21,323	1/1:4,0:4:8.99:74,9,0	0/0:32,0:19:8.79:0,9,280	0/0:51,0:27:58.52:0,59,531	1/1:4,16:20:8.38:105,8,0	0/0:24,0:24:24.89:0,25,334	0/0:23,0:23:34.14:0,34,399	0/0:30,0:30:81.43:0,81,724	0/0:14,0:13:0.85:0,1,189	1/1:13,0:13:32.92:340,33,0	1/1:1,12:13:3.01:41,3,0	0/1:13,0:13:15.65:16,0,146	0/0:23,0:23:1.72:0,2,307	0/0:19,0:19:11.91:0,12,291	0/1:12,0:12:0.96:1,0,170	0/0:9,0:9:9.88:0,10,77	0/1:4,15:20:10.88:86,0,11	0/0:7,0:7:9.07:0,9,88	1/1:8,18:26:74.76:622,75,0	0/0:20,0:20:50.67:0,51,420	0/0:16,0:16:32.69:0,33,256	0/0:18,0:18:9.55:0,10,180	0/1:7,0:7:7.83:8,0,62	0/0:12,0:12:3.40:0,3,162	0/0:19,0:19:41.68:0,42,350	0/0:23,0:23:34.94:0,35,458	0/0:18,0:18:30.82:0,31,274	0/0:19,0:19:47.93:0,48,357
chr10	21115554	.	A	ATCTCTC	3371.30	PASS	AB=0.939;AC=38;AF=0.792;AN=48;BaseQRankSum=-1.056;DP=598;FS=5.817;HRun=0;HaplotypeScore=157.7946;InbreedingCoeff=-0.0633;MQ=69.68;MQ0=6;MQRankSum=-1.826;QD=7.56;ReadPosRankSum=-1.669;VQSLOD=1.9779;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:24,6:35:5.81:109,6,0	./.	./.	./.	0/1:19,0:21:5.49:65,0,5	0/0:21,0:26:3.73:0,4,23	0/1:22,0:24:19.01:19,0,37	./.	0/1:17,0:16:45.28:263,0,45	1/1:15,0:15:11.90:137,12,0	1/1:15,0:15:3.01:58,3,0	0/1:13,1:14:39.14:401,0,39	1/1:22,0:22:18.06:365,18,0	1/1:24,0:24:15:252,15,0	1/1:10,0:18:5.02:74,5,0	1/1:11,0:11:2.86:23,3,0	0/1:18,0:19:50.44:50,0,65	1/1:7,2:11:6.91:142,7,0	1/1:29,0:29:3.87:26,4,0	1/1:22,0:22:2.85:49,3,0	1/1:22,0:22:8.87:113,9,0	1/1:20,0:20:2.76:42,3,0	0/0:6,0:10:0.88:0,1,2	0/1:12,0:14:49.01:104,0,49	1/1:21,0:21:2.34:24,2,0	1/1:29,0:29:21.96:418,22,0	1/1:21,0:21:9.03:225,9,0	1/1:22,0:22:21.07:412,21,0
chr10	21115562	.	C	CTCTCTCTCTCTC	3509.30	PASS	AB=1.000;AC=40;AF=0.769;AN=52;BaseQRankSum=-1.534;DP=608;FS=21.734;HRun=0;HaplotypeScore=213.6856;InbreedingCoeff=-0.0138;MQ=64.58;MQ0=10;MQRankSum=-1.934;QD=6.81;ReadPosRankSum=-2.299;VQSLOD=0.8336;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:34,0:34:5.75:53,6,0	./.	0/1:25,0:12:0:0,0,0	./.	0/1:25,0:25:44.02:86,0,44	0/0:29,0:29:6.66:0,7,66	0/1:23,0:23:17.17:17,0,119	1/1:25,0:24:2.37:8,2,0	0/1:15,0:14:86.47:235,0,86	1/1:16,0:16:12.02:147,12,0	1/1:12,0:12:3.01:58,3,0	0/1:17,0:17:80.95:287,0,81	1/1:25,0:25:18.06:365,18,0	1/1:27,0:26:15.37:252,15,0	0/1:21,0:21:30.60:31,0,39	1/1:13,0:13:1.70:5,2,0	0/1:17,0:17:79.65:80,0,146	1/1:13,0:13:7.57:84,8,0	1/1:26,0:26:5.01:29,5,0	1/1:24,0:24:2.49:49,2,0	1/1:25,0:25:9.47:164,9,0	1/1:20,0:20:3.01:43,3,0	0/0:12,0:12:3.37:0,3,45	0/1:15,0:15:45.82:46,0,131	1/1:20,0:20:2.05:24,2,0	1/1:31,0:31:25.24:547,25,0	1/1:17,5:24:9.03:310,9,0	1/1:22,0:22:22.01:590,22,0
chr10	21115585	.	T	TCTCT	2132.97	PASS	AB=1.000;AC=44;AF=0.846;AN=52;BaseQRankSum=-1.097;DP=502;FS=6.467;HRun=0;HaplotypeScore=100.9599;InbreedingCoeff=-0.1268;MQ=57.77;MQ0=13;MQRankSum=-0.933;QD=4.68;ReadPosRankSum=-1.978;VQSLOD=1.2398;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:31,0:31:5.75:64,6,0	./.	./.	0/0:21,0:8:0.50:0,1,1	1/1:27,0:27:5.87:93,6,0	0/1:26,0:26:6.55:7,0,16	0/1:20,0:20:19.47:30,0,19	1/1:13,0:12:1.25:3,1,0	0/1:13,0:12:34.19:118,0,34	1/1:19,0:19:9.02:122,9,0	1/1:13,0:13:3.01:58,3,0	0/1:17,0:17:25.17:248,0,25	1/1:21,0:21:18.06:296,18,0	1/1:22,0:21:15.02:252,15,0	1/1:20,0:20:5.75:83,6,0	1/1:9,4:12:2.97:55,3,0	0/1:14,0:14:40.28:53,0,40	1/1:14,0:14:3.01:52,3,0	1/1:18,0:17:2.99:23,3,0	1/1:15,0:15:3.01:50,3,0	1/1:23,0:23:8.99:87,9,0	1/1:17,0:17:3.01:43,3,0	1/1:14,0:14:2.74:13,3,0	0/1:18,0:18:31.44:124,0,31	1/1:11,0:11:3:25,3,0	1/1:22,0:22:11.37:135,11,0	1/1:17,0:17:3.01:51,3,0	1/1:17,0:17:12.04:171,12,0
chr10	21116163	.	C	CA	5222.28	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=15.990;DP=706;FS=2.061;HRun=2;HaplotypeScore=74.7974;InbreedingCoeff=0.9968;MQ=87.01;MQ0=0;MQRankSum=0.633;QD=39.56;ReadPosRankSum=-1.041;VQSLOD=4.9190;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,111,1334	1/1:1,5:6:15.05:212,15,0	0/0:22,0:22:60.13:0,60,708	0/0:28,0:28:72:0,72,820	1/1:0,29:30:84.24:1152,84,0	0/0:26,0:26:78.25:0,78,967	0/0:17,0:17:45.12:0,45,544	0/0:26,0:26:66.21:0,66,818	0/0:30,0:30:90.24:0,90,1076	1/1:2,27:29:78.26:1090,78,0	1/1:0,22:22:66.22:928,66,0	0/0:20,0:20:60.19:0,60,744	0/0:25,0:25:75.24:0,75,929	0/0:21,0:21:60.19:0,60,744	0/0:29,0:29:81.23:0,81,989	0/0:29,0:29:84.26:0,84,1030	1/1:0,26:26:75.25:1055,75,0	0/0:14,0:14:42.11:0,42,504	1/1:1,18:19:57.18:785,57,0	0/0:34,0:34:99:0,99,1214	0/0:34,0:34:99:0,99,1162	0/0:24,0:24:69.22:0,69,855	0/0:24,0:24:72.23:0,72,892	0/0:21,0:21:60.19:0,60,744	0/0:24,0:24:72.20:0,72,868	0/0:30,1:31:47.87:0,48,1036	0/0:41,0:41:99:0,123,1484	0/0:15,0:15:45.14:0,45,557
chr10	21122941	.	GAGGTGCGGGTGTAAGAATCCCGCGAGGAAGCCTGCT	G	1871.61	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.531;DP=579;FS=0.000;HRun=0;HaplotypeScore=507.0675;InbreedingCoeff=0.9295;MQ=91.42;MQ0=0;MQRankSum=-4.432;QD=110.09;ReadPosRankSum=3.518;VQSLOD=1.3006;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,135,18209	0/0:3,0:3:9.03:0,9,1475	0/0:27,0:27:78.22:0,78,5286	0/0:25,0:25:68.53:0,69,4302	0/0:20,0:20:57.20:0,57,7407	0/0:31,0:31:87.30:0,87,11056	0/0:18,0:18:51.18:0,51,5898	0/0:30,0:30:86.95:0,87,5815	0/0:22,0:22:66.23:0,66,9246	0/0:21,0:21:63.22:0,63,7924	0/0:18,0:18:51.18:0,51,6746	0/0:17,0:17:51.18:0,51,7485	0/0:23,0:23:66.19:0,66,9395	0/0:12,0:12:36.12:0,36,4256	1/1:9,8:17:21.07:1964,21,0	0/0:26,0:25:75.26:0,75,10203	0/0:33,0:33:96.33:0,96,12725	0/0:6,0:6:18.06:0,18,2589	0/0:19,0:19:54.19:0,54,6010	0/0:18,0:18:51.18:0,51,7254	0/0:27,0:27:75.26:0,75,9173	0/0:15,0:15:42.14:0,42,5588	0/0:23,0:23:66.23:0,66,8610	0/0:23,0:23:69.24:0,69,9565	0/0:8,0:8:21.07:0,21,3424	0/0:17,0:17:48.16:0,48,6833	0/0:24,0:24:69.24:0,69,9670	0/0:10,0:10:27.06:0,27,3210
chr10	21123212	.	CAAA	C	856.38	PASS	AB=0.867;AC=10;AF=0.179;AN=56;BaseQRankSum=4.949;DP=515;FS=2.163;HRun=17;HaplotypeScore=85.7362;InbreedingCoeff=0.7494;MQ=70.16;MQ0=3;MQRankSum=3.036;QD=8.08;ReadPosRankSum=6.681;VQSLOD=-0.2673;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:37:48.12:0,48,658	1/1:0,2:2:6.01:62,6,0	0/1:28,1:14:18.86:37,0,19	0/0:24,0:15:11.98:0,12,133	1/1:5,8:16:24.01:208,24,0	0/0:16,0:20:42.10:0,42,614	0/0:10,0:16:24.04:0,24,345	0/0:22,0:25:40.47:0,40,533	0/0:17,0:17:39.13:0,39,558	1/1:5,16:22:44.72:449,45,0	1/1:5,7:14:11.93:148,12,0	0/0:15,0:15:15.05:0,15,245	0/0:16,0:16:17.95:0,18,185	0/0:23,0:23:54.12:0,54,773	0/0:20,0:20:51.09:0,51,711	0/0:10,0:15:21.07:0,21,309	0/0:7,0:14:15.68:0,16,101	0/0:14,0:15:16.26:0,16,191	0/1:16,2:23:0.65:114,0,1	0/0:11,0:22:56.20:0,56,806	0/0:11,0:11:17.92:0,18,185	0/0:11,0:11:24.06:0,24,321	0/0:8,0:15:29.79:0,30,362	0/0:7,0:15:8.99:0,9,105	0/0:18,0:17:36.08:0,36,473	0/0:13,1:25:32.35:0,32,827	0/0:25,0:24:57.19:0,57,837	0/0:9,0:8:12.01:0,12,161
chr10	21123363	.	T	TG	7299.74	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-11.719;DP=476;FS=0.000;HRun=8;HaplotypeScore=61.6330;InbreedingCoeff=0.9752;MQ=83.68;MQ0=0;MQRankSum=-3.529;QD=25.26;ReadPosRankSum=0.651;VQSLOD=5.4840;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,19:22:51.15:589,51,0	0/0:10,0:10:27.01:0,27,247	0/0:19,0:18:25.05:0,25,248	0/0:19,0:19:31.46:0,31,280	0/0:31,0:31:80.76:0,81,741	1/1:3,13:16:36.11:415,36,0	1/1:3,20:23:51.15:588,51,0	1/1:7,13:20:39.07:422,39,0	1/1:2,10:12:24.07:277,24,0	0/0:27,0:27:69.04:0,69,631	0/0:24,0:24:66.01:0,66,599	1/1:3,13:16:39.12:449,39,0	1/1:2,13:15:36.11:415,36,0	1/1:1,17:18:48.14:554,48,0	0/0:15,0:15:39.02:0,39,357	1/1:0,7:7:21.06:240,21,0	0/0:22,0:22:59.99:0,60,537	1/1:1,11:12:33.10:381,33,0	0/0:19,1:20:7.56:0,8,322	1/1:3,16:19:39.12:450,39,0	1/1:4,10:14:27.08:311,27,0	1/1:1,16:18:47.97:534,48,0	1/1:5,14:19:36.11:415,36,0	1/1:1,10:11:27:294,27,0	1/1:0,6:6:15.04:173,15,0	1/1:5,15:20:14.66:423,15,0	1/1:2,9:10:21.05:232,21,0	1/1:1,9:10:12.04:138,12,0
chr10	21123687	.	A	AAAAC	7607.54	PASS	AB=0.900;AC=13;AF=0.232;AN=56;BaseQRankSum=-10.669;DP=733;FS=1.648;HRun=0;HaplotypeScore=114.1889;InbreedingCoeff=0.8756;MQ=58.61;MQ0=0;MQRankSum=-2.209;QD=42.03;ReadPosRankSum=0.383;VQSLOD=5.1094;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:87.56:0,88,1546	1/1:3,8:11:15.05:374,15,0	0/0:32,0:30:59.05:0,59,856	0/0:28,0:24:44.96:0,45,552	1/1:4,27:31:69.16:1573,69,0	0/0:25,0:25:63.19:0,63,1027	0/0:24,0:24:63.09:0,63,927	0/0:32,0:32:75.21:0,75,1132	0/0:22,0:22:60.19:0,60,989	1/1:6,30:39:99:2116,102,0	1/1:2,19:21:53.89:1098,54,0	0/0:23,0:23:60.15:0,60,898	0/0:29,0:29:69.24:0,69,1151	0/0:34,0:34:87.03:0,87,1362	0/0:26,0:26:63.18:0,63,1011	0/0:29,0:29:75.17:0,75,1115	1/1:8,21:29:9.28:1336,9,0	0/0:31,0:32:81.22:0,81,1307	1/1:10,13:23:56.78:1090,57,0	0/0:15,0:15:30.09:0,30,483	0/0:38,0:38:99:0,99,1624	0/0:24,0:24:63.17:0,63,967	0/0:14,0:14:36.08:0,36,523	0/0:30,0:30:81.16:0,81,1255	0/0:18,0:18:39.08:0,39,549	0/1:24,3:26:20.79:21,0,687	0/0:30,0:30:81.17:0,81,1204	0/0:3,0:3:9.03:0,9,153
chr10	21124347	.	T	TCCC	1795.82	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-2.337;DP=520;FS=8.744;HRun=7;HaplotypeScore=77.2398;InbreedingCoeff=0.9529;MQ=80.16;MQ0=1;MQRankSum=-2.181;QD=30.96;ReadPosRankSum=-1.583;VQSLOD=1.2366;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:81.25:0,81,1102	1/1:0,3:3:6.02:124,6,0	0/0:29,0:27:52.97:0,53,692	0/0:25,0:25:50.72:0,51,688	1/1:4,4:9:21.04:354,21,0	0/0:21,0:21:60.17:0,60,786	0/0:21,0:22:52.61:0,53,733	0/0:32,0:32:78.21:0,78,1034	0/0:25,0:25:75.25:0,75,1022	1/1:3,10:15:33.07:603,33,0	1/1:4,5:11:21.01:353,21,0	0/0:25,0:25:75.25:0,75,1019	0/0:17,0:17:45.15:0,45,614	0/0:23,0:23:51.11:0,51,670	0/0:24,0:24:72.24:0,72,982	0/0:26,0:25:69.22:0,69,941	1/1:5,7:13:21.07:435,21,0	0/0:15,0:15:39.13:0,39,532	1/1:4,3:7:6.02:104,6,0	0/0:24,0:24:69.23:0,69,941	0/0:23,0:23:69.21:0,69,916	0/0:18,0:18:48.10:0,48,611	0/0:13,0:13:33.10:0,33,450	0/0:13,0:13:39.13:0,39,532	0/0:14,0:14:39.10:0,39,513	0/0:22,0:22:48.13:0,48,655	0/0:11,0:11:24.03:0,24,306	0/0:10,0:10:24.06:0,24,328
chr10	21127044	.	TA	T	10093.70	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=0.140;DP=532;FS=9.508;HRun=10;HaplotypeScore=60.6323;InbreedingCoeff=0.9378;MQ=71.81;MQ0=2;MQRankSum=-3.194;QD=20.98;ReadPosRankSum=2.925;VQSLOD=5.6491;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,21:23:56.98:494,57,0	1/1:3,6:9:14.99:130,15,0	0/0:13,0:8:14.67:0,15,104	0/0:20,0:14:5.97:0,6,109	1/1:4,17:22:41.66:341,42,0	1/1:1,24:25:68.98:598,69,0	1/1:0,22:22:50.98:442,51,0	1/1:4,21:25:62.93:532,63,0	1/1:0,15:15:41.99:364,42,0	1/1:2,26:28:77.94:667,78,0	1/1:3,13:16:44.93:379,45,0	1/1:1,8:9:20.99:182,21,0	1/1:2,16:18:44.99:390,45,0	1/1:3,19:22:47.99:416,48,0	0/0:16,0:16:42.11:0,42,463	1/1:3,15:18:35.99:312,36,0	1/1:2,14:16:41.87:353,42,0	1/1:3,18:21:47.98:416,48,0	1/1:5,17:22:50.91:428,51,0	1/1:2,27:29:77.90:668,78,0	1/1:1,7:8:17.99:156,18,0	1/1:2,12:14:14.32:264,14,0	1/1:0,15:16:34.97:285,35,0	1/1:4,19:23:44.51:411,45,0	1/1:1,16:17:44.99:390,45,0	1/1:1,26:27:77.93:667,78,0	1/1:3,20:23:53.98:468,54,0	1/1:0,13:13:38.99:338,39,0
chr10	21128822	.	AGTGT	A	5911.84	PASS	AB=0.909;AC=35;AF=0.648;AN=54;BaseQRankSum=2.855;DP=676;FS=0.000;HRun=0;HaplotypeScore=138.7502;InbreedingCoeff=0.6480;MQ=68.83;MQ0=11;MQRankSum=2.133;QD=12.47;ReadPosRankSum=2.705;VQSLOD=4.4967;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:30,7:38:1.28:405,0,1	0/0:7,0:7:11.83:0,12,200	./.	0/0:36,0:23:4.63:0,5,39	0/0:13,1:13:12.04:0,12,215	1/1:7,7:14:13.65:322,14,0	1/1:14,5:19:8.58:229,9,0	0/1:46,3:46:23.33:202,0,23	1/1:14,5:20:17.02:355,17,0	0/0:17,0:17:8.85:0,9,289	0/0:9,0:9:6.02:0,6,143	1/1:16,3:20:12.03:170,12,0	1/1:13,6:21:41.14:542,41,0	1/1:27,7:35:39.10:556,39,0	0/0:26,0:26:11.25:0,11,401	1/1:10,5:18:12.01:164,12,0	0/0:31,0:34:53.37:0,53,970	1/1:25,3:27:20.90:410,21,0	0/0:28,0:27:20.53:0,21,334	1/1:10,2:14:17.54:226,18,0	1/1:54,10:61:53.53:695,54,0	1/1:17,8:25:21.54:324,22,0	1/1:13,2:15:6.51:175,7,0	1/1:19,6:25:23.94:340,24,0	1/1:13,6:21:1.67:310,2,0	0/1:22,1:23:84.77:85,0,116	1/1:11,2:13:15.03:211,15,0	1/1:6,3:10:17.98:191,18,0
chr10	21128896	.	A	AGT	13499.70	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-10.253;DP=767;FS=1.271;HRun=0;HaplotypeScore=105.2200;InbreedingCoeff=0.9594;MQ=51.92;MQ0=32;MQRankSum=1.821;QD=25.47;ReadPosRankSum=2.120;VQSLOD=6.0248;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,27:36:60.19:972,60,0	0/0:12,0:11:4.13:0,4,193	0/0:29,0:9:23.41:0,23,242	0/0:43,0:10:17:0,17,174	0/0:23,0:23:57.18:0,57,718	1/1:3,13:16:33.11:548,33,0	1/1:7,19:25:39.13:631,39,0	1/1:29,29:51:58.36:1311,58,0	1/1:4,20:24:36.12:598,36,0	0/0:32,0:29:66.51:0,67,806	0/0:23,0:22:60.14:0,60,743	1/1:4,18:22:42.14:698,42,0	1/1:10,19:28:7.03:623,7,0	1/1:7,15:22:35.11:463,35,0	0/0:28,0:27:66.20:0,66,819	1/1:6,14:19:24.08:399,24,0	0/0:33,0:33:38.75:0,39,622	1/1:4,19:24:40:701,40,0	0/0:13,0:10:27.09:0,27,340	1/1:4,23:26:48.16:787,48,0	1/1:22,27:48:47.81:865,48,0	1/1:6,17:23:41.73:697,42,0	1/1:5,19:24:29.92:472,30,0	1/1:1,26:27:54.01:891,54,0	1/1:5,17:22:30.10:498,30,0	1/1:12,33:42:36.02:1560,36,0	1/1:4,9:13:18.06:298,18,0	1/1:5,12:16:30.10:488,30,0
chr10	21129252	.	A	AT	1418.83	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-4.677;DP=526;FS=4.257;HRun=8;HaplotypeScore=77.4542;InbreedingCoeff=0.8966;MQ=69.30;MQ0=23;MQRankSum=0.839;QD=16.50;ReadPosRankSum=0.909;VQSLOD=3.8214;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:62.40:0,62,503	1/1:3,4:7:14.78:136,15,0	0/0:60,0:20:13.35:0,13,238	0/0:64,0:17:0:0,0,113	1/1:10,11:20:32.50:328,32,0	0/0:17,0:17:32.87:0,33,301	0/0:22,0:22:55.82:0,56,458	0/0:24,0:23:50.24:0,50,415	0/0:9,0:9:17.98:0,18,158	1/1:4,8:10:18.05:208,18,0	1/1:3,8:11:26.11:261,26,0	0/0:11,0:11:26.02:0,26,218	0/0:13,0:13:24.40:0,24,220	0/0:13,0:13:25.83:0,26,224	0/0:21,0:21:35.93:0,36,307	0/0:19,0:19:43.25:0,43,348	1/1:6,10:15:30.09:346,30,0	0/0:3,0:2:2.97:0,3,20	1/1:9,10:18:32.04:323,32,0	0/0:23,0:23:53.86:0,54,465	0/0:13,0:13:29.92:0,30,260	0/0:11,0:11:17.99:0,18,165	0/0:9,0:9:14.98:0,15,130	0/0:9,0:9:17.85:0,18,144	0/0:21,0:21:50.69:0,51,425	0/0:23,0:21:47.42:0,47,382	0/0:15,0:15:26.32:0,26,250	0/0:11,0:11:21.01:0,21,192
chr10	21130101	.	GAAATATTTACA	G	3605.99	PASS	AB=0.879;AC=17;AF=0.304;AN=56;BaseQRankSum=0.481;DP=544;FS=12.235;HRun=0;HaplotypeScore=275.8884;InbreedingCoeff=-0.4406;MQ=87.00;MQ0=2;MQRankSum=-8.054;QD=10.99;ReadPosRankSum=-0.729;VQSLOD=0.5887;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:10,3:13:99:211,0,469	0/0:6,0:6:18.06:0,18,956	0/0:23,0:23:66.22:0,66,3218	0/0:27,0:27:75.26:0,75,3922	0/0:24,0:24:72.24:0,72,3727	0/1:26,3:29:99:455,0,1261	0/1:16,2:18:99:136,0,829	0/1:19,5:24:99:459,0,645	0/1:11,5:16:99:175,0,447	0/0:18,0:18:54.17:0,54,2849	0/0:30,0:30:87.30:0,87,4799	0/0:13,2:15:30.10:0,30,987	0/1:19,3:22:99:139,0,1178	0/1:28,0:28:99:229,0,1857	0/0:20,0:20:60.20:0,60,3236	0/1:18,5:23:99:284,0,1344	0/0:21,0:21:63.22:0,63,3411	0/1:10,3:13:99:144,0,136	0/0:25,0:25:66.23:0,66,3606	0/1:17,2:19:99:220,0,1145	0/1:8,2:10:93.87:94,0,357	0/1:17,1:18:99:187,0,859	0/1:14,2:16:63.96:64,0,711	0/1:10,0:10:99:258,0,283	0/1:14,0:14:99:137,0,753	0/1:26,3:29:99:145,0,1915	0/1:18,6:23:99:269,0,1081	0/0:7,0:7:9.03:0,9,251
chr10	21130103	.	A	AGAGTC	20658.20	PASS	AB=0.565;AC=37;AF=0.661;AN=56;BaseQRankSum=16.592;DP=492;FS=20.434;HRun=0;HaplotypeScore=146.5032;InbreedingCoeff=0.8788;MQ=90.14;MQ0=2;MQRankSum=-17.109;QD=68.63;ReadPosRankSum=3.346;VQSLOD=4.1981;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,9:12:27.09:793,27,0	0/0:6,0:6:18.06:0,18,420	0/0:23,0:23:66.22:0,66,1445	0/0:26,0:26:72.22:0,72,1614	0/0:24,0:24:72.24:0,72,1616	1/1:6,20:26:75.17:1953,75,0	1/1:4,10:14:33.06:900,33,0	1/1:8,13:21:51.99:1467,52,0	1/1:9,6:14:22.58:653,23,0	0/0:18,0:18:54.17:0,54,1201	0/0:31,0:31:87.28:0,87,1907	1/1:3,9:13:30.10:880,30,0	1/1:4,15:19:48.16:1336,48,0	1/1:2,24:26:78.20:2135,78,0	0/0:20,0:20:60.20:0,60,1337	1/1:5,17:22:54.06:1575,54,0	0/0:21,0:21:63.22:0,63,1468	1/1:3,3:7:2.67:280,3,0	0/0:22,0:22:66.23:0,66,1525	1/1:2,14:16:45.15:1279,45,0	1/1:4,7:11:14.33:348,14,0	1/1:1,13:14:39.13:1139,39,0	1/1:3,10:13:30.10:818,30,0	1/1:1,7:8:17.58:506,18,0	1/1:0,12:12:36.12:1058,36,0	0/1:6,20:26:64.60:1876,0,65	1/1:7,14:21:51.01:1398,51,0	1/1:0,3:3:9.03:265,9,0
chr10	21130107	.	T	TC	2554.55	PASS	AB=0.669;AC=34;AF=0.607;AN=56;BaseQRankSum=15.976;DP=510;FS=9.942;HRun=0;HaplotypeScore=183.5271;InbreedingCoeff=0.6918;MQ=90.58;MQ0=2;MQRankSum=-15.710;QD=8.01;ReadPosRankSum=5.763;VQSLOD=2.6980;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,9:14:22.12:113,22,0	0/0:6,0:6:18.05:0,18,237	0/0:23,0:23:62.93:0,63,823	0/0:28,0:28:78.16:0,78,1040	0/0:23,0:23:69.22:0,69,949	1/1:7,20:27:18.28:207,18,0	1/1:4,10:14:28.49:134,28,0	1/1:11,13:24:25.81:281,26,0	0/1:12,6:17:11.67:121,0,12	0/0:17,0:17:51.17:0,51,713	0/0:31,0:31:93.30:0,93,1286	1/1:3,10:13:30.90:155,31,0	1/1:5,14:19:17.70:146,18,0	1/1:4,24:28:32.45:253,32,0	0/0:20,0:20:60.20:0,60,838	1/1:6,17:23:46.17:222,46,0	0/0:21,0:21:63.19:0,63,848	0/1:4,3:7:17.83:18,0,28	0/0:22,0:22:66.21:0,66,907	1/1:2,14:16:32.01:159,32,0	0/1:6,7:13:7.13:7,0,78	1/1:1,13:14:35.88:158,36,0	1/1:4,10:14:8.72:86,9,0	1/1:1,7:8:11.35:56,11,0	1/1:1,12:13:16.92:139,17,0	0/1:7,20:27:33.67:266,0,34	1/1:8,15:22:26:205,26,0	1/1:0,3:3:8.55:43,9,0
chr10	21130108	.	T	TG	3114.46	PASS	AB=0.679;AC=35;AF=0.625;AN=56;BaseQRankSum=14.767;DP=580;FS=15.353;HRun=0;HaplotypeScore=215.6200;InbreedingCoeff=0.7126;MQ=86.23;MQ0=2;MQRankSum=-14.487;QD=8.03;ReadPosRankSum=4.102;VQSLOD=2.4389;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,9:18:20.47:121,20,0	0/0:6,0:6:18.05:0,18,237	0/0:24,0:24:66.21:0,66,895	0/0:27,0:28:77.93:0,78,1051	0/0:23,0:23:66.22:0,66,922	1/1:8,20:28:32.45:276,32,0	1/1:8,10:18:13.66:125,14,0	1/1:32,13:45:30.50:447,31,0	1/1:13,6:19:27.69:222,28,0	0/0:17,0:17:51.17:0,51,713	0/0:31,0:31:93.30:0,93,1280	1/1:8,10:18:8.79:129,9,0	1/1:8,14:22:2.29:124,2,0	1/1:8,24:32:17.30:273,17,0	0/0:21,0:21:60.20:0,60,838	1/1:7,17:24:48:245,48,0	0/0:21,0:21:63.19:0,63,848	0/1:5,3:8:3.19:34,0,3	0/0:21,0:21:63.21:0,63,881	1/1:4,14:18:10.38:133,10,0	0/1:10,7:17:24.76:76,0,25	1/1:2,13:15:26.08:146,26,0	1/1:6,10:16:17.07:135,17,0	1/1:2,7:9:2.02:44,2,0	1/1:5,12:17:36.76:184,37,0	0/1:10,20:30:14.31:313,0,14	1/1:14,15:28:36.20:252,36,0	1/1:0,3:3:8.55:43,9,0
chr10	21132851	.	TCCC	T	9637.01	PASS	AB=0.560;AC=40;AF=0.714;AN=56;BaseQRankSum=-8.879;DP=485;FS=12.925;HRun=12;HaplotypeScore=92.3156;InbreedingCoeff=0.7251;MQ=70.76;MQ0=0;MQRankSum=-2.468;QD=24.03;ReadPosRankSum=3.879;VQSLOD=2.3664;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,41:44:96.28:1207,96,0	0/0:3,0:8:6.23:0,6,14	0/0:18,0:15:11.26:0,11,395	0/0:15,0:12:18.05:0,18,246	0/1:7,2:21:29.98:86,0,30	1/1:1,17:18:42.13:528,42,0	1/1:7,14:22:25.61:335,26,0	1/1:8,15:21:23.98:286,24,0	1/1:1,14:15:42.13:530,42,0	0/0:3,0:5:2.49:0,2,5	0/0:5,0:14:13.07:0,13,47	1/1:1,13:15:36.04:435,36,0	1/1:3,17:20:2.25:520,2,0	1/1:1,14:15:36.10:455,36,0	0/0:9,0:10:24.06:0,24,394	1/1:0,17:18:48.09:584,48,0	0/1:2,2:25:22.46:45,0,22	1/1:2,19:21:45.13:569,45,0	0/0:3,0:11:12.61:0,13,47	1/1:2,12:14:36.10:452,36,0	1/1:1,15:18:41.99:491,42,0	1/1:0,9:9:24.08:303,24,0	1/1:2,12:14:30.08:377,30,0	1/1:1,16:17:39.12:493,39,0	1/1:1,14:16:33.02:394,33,0	1/1:3,19:22:57.16:713,57,0	1/1:1,17:18:39.12:493,39,0	1/1:4,11:15:27.06:341,27,0
chr10	21133313	.	T	TA	29173.16	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-11.978;DP=754;FS=4.057;HRun=0;HaplotypeScore=64.2140;InbreedingCoeff=0.9995;MQ=83.98;MQ0=0;MQRankSum=-7.387;QD=43.35;ReadPosRankSum=5.371;VQSLOD=5.2227;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,53:56:99:2309,147,0	1/1:0,14:14:39.05:592,39,0	0/0:25,0:25:69.62:0,70,869	0/0:20,0:20:48.11:0,48,624	1/1:0,30:30:84.29:1331,84,0	1/1:0,24:23:63.21:1007,63,0	1/1:1,27:28:66.22:1055,66,0	1/1:0,38:38:99:1777,114,0	1/1:0,32:32:90.31:1438,90,0	1/1:0,22:22:63.21:1006,63,0	1/1:0,17:17:48.16:767,48,0	1/1:0,24:24:69.24:1103,69,0	1/1:2,26:28:75.26:1189,75,0	1/1:0,34:34:87.30:1390,87,0	0/0:36,0:36:99:0,108,1481	1/1:2,22:24:57.19:911,57,0	1/1:0,25:25:72.24:1141,72,0	1/1:1,15:16:45.15:719,45,0	1/1:0,31:31:93.32:1471,93,0	1/1:0,24:24:69.13:1045,69,0	1/1:2,48:50:99:2158,135,0	1/1:0,26:26:72.24:1138,72,0	1/1:1,22:23:60.20:958,60,0	1/1:0,25:25:75.26:1199,75,0	1/1:0,15:15:33.11:527,33,0	1/1:1,27:28:75.24:1170,75,0	1/1:1,29:30:84.29:1342,84,0	1/1:0,9:9:27.09:431,27,0
chr10	21133473	.	GT	G	1500.40	PASS	AB=0.780;AC=12;AF=0.214;AN=56;BaseQRankSum=-10.473;DP=653;FS=0.864;HRun=13;HaplotypeScore=102.0631;InbreedingCoeff=0.7659;MQ=68.54;MQ0=2;MQRankSum=0.470;QD=9.81;ReadPosRankSum=-3.590;VQSLOD=2.2153;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:57.94:0,58,313	1/1:1,7:8:14.91:109,15,0	0/0:20,0:14:21:0,21,134	0/1:17,0:13:17.82:18,0,59	0/1:5,18:23:7.68:275,0,8	0/0:29,0:29:69.42:0,69,373	0/0:29,0:29:68.88:0,69,357	0/0:32,0:32:61.93:0,62,295	0/0:28,0:28:69.47:0,69,375	1/1:4,22:29:41.67:429,42,0	1/1:8,18:26:31.19:252,31,0	0/0:24,0:24:60.67:0,61,323	0/0:21,0:21:52.28:0,52,288	0/0:30,0:30:78.09:0,78,418	0/0:22,1:25:25.68:0,26,460	0/0:20,0:20:48.67:0,49,247	1/1:5,15:20:9.60:233,10,0	0/0:12,0:12:31.60:0,32,164	1/1:12,17:30:6.12:357,6,0	0/0:25,0:25:64.21:0,64,384	0/0:14,0:14:34.67:0,35,185	0/0:20,0:20:55.18:0,55,305	0/0:22,0:22:61.01:0,61,344	0/0:25,0:25:54.98:0,55,295	0/0:29,0:29:72.62:0,73,420	0/0:26,2:28:24.92:0,25,257	0/0:30,0:30:83.97:0,84,461	0/0:13,0:13:26.24:0,26,150
chr10	21133585	.	CT	C	11581.12	PASS	AB=0.944;AC=52;AF=0.929;AN=56;BaseQRankSum=-0.307;DP=662;FS=9.773;HRun=10;HaplotypeScore=70.5437;InbreedingCoeff=0.4999;MQ=71.59;MQ0=1;MQRankSum=-1.722;QD=18.15;ReadPosRankSum=3.639;VQSLOD=5.2671;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,20:22:53.03:449,53,0	1/1:4,8:12:20.98:182,21,0	0/1:20,3:19:58.12:58,0,215	0/1:19,0:16:3.31:3,0,148	1/1:4,41:45:99:1008,117,0	1/1:6,32:38:50.79:670,51,0	1/1:3,23:26:56.98:495,57,0	1/1:12,12:24:40.88:352,41,0	1/1:3,12:15:35.98:313,36,0	1/1:3,19:21:50.98:443,51,0	1/1:4,19:23:44.96:391,45,0	1/1:2,13:15:2.81:253,3,0	1/1:3,15:18:8.81:305,9,0	1/1:3,21:24:50.99:443,51,0	0/0:24,0:24:43.30:0,43,622	1/1:2,17:19:50.98:443,51,0	1/1:3,24:27:65.99:573,66,0	1/1:8,15:23:41.98:365,42,0	1/1:5,20:25:53.97:466,54,0	1/1:3,31:34:89.51:758,90,0	1/1:3,6:9:11.99:104,12,0	1/1:3,29:32:83.98:729,84,0	1/1:1,24:25:65.99:573,66,0	1/1:6,10:16:26.99:234,27,0	1/1:8,29:37:50.77:670,51,0	1/1:4,17:21:50.98:443,51,0	1/1:5,27:32:74.97:651,75,0	1/1:1,10:11:23.99:208,24,0
chr10	21133738	.	C	CAT	4715.07	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-10.344;DP=627;FS=2.501;HRun=0;HaplotypeScore=91.0300;InbreedingCoeff=0.9767;MQ=76.96;MQ0=1;MQRankSum=-0.234;QD=38.02;ReadPosRankSum=1.723;VQSLOD=6.7024;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:74.47:0,74,963	1/1:3,1:4:6:76,6,0	0/0:21,0:20:36.83:0,37,455	0/0:29,0:28:66.11:0,66,714	1/1:4,23:27:54.09:934,54,0	0/0:38,0:38:94.52:0,95,1208	0/0:13,0:13:39.10:0,39,488	0/0:24,0:24:54.15:0,54,688	0/0:18,0:18:51.13:0,51,646	1/1:4,24:28:72.16:1208,72,0	1/1:5,19:24:41.34:726,41,0	0/0:18,0:18:42.12:0,42,541	0/0:20,0:20:54.14:0,54,684	0/0:21,0:21:51.14:0,51,647	0/0:28,0:28:72.20:0,72,911	0/0:30,0:30:72.21:0,72,927	1/1:2,20:22:57.19:975,57,0	0/0:14,0:14:39.13:0,39,518	1/1:2,16:19:51.10:796,51,0	0/0:28,0:28:65.43:0,65,877	0/0:17,0:17:39.09:0,39,485	0/0:20,0:20:54.16:0,54,699	0/0:22,0:22:63.19:0,63,823	0/0:14,0:14:36.11:0,36,478	0/0:29,0:29:81.18:0,81,1055	0/0:31,1:31:78.25:0,78,1019	0/0:30,0:30:78.23:0,78,1004	0/0:9,0:9:18.01:0,18,204
chr10	21133829	.	GAC	G	6623.22	PASS	AB=0.571;AC=49;AF=0.875;AN=56;BaseQRankSum=-0.633;DP=656;FS=6.095;HRun=0;HaplotypeScore=88.1301;InbreedingCoeff=0.7488;MQ=57.35;MQ0=48;MQRankSum=2.334;QD=16.15;ReadPosRankSum=2.573;VQSLOD=4.6227;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:19,5:22:33.10:429,33,0	1/1:8,2:10:21.07:269,21,0	0/0:105,0:19:26.39:0,26,376	0/0:122,0:34:54.72:0,55,758	1/1:17,4:20:32.79:445,33,0	1/1:6,13:19:8.76:93,9,0	1/1:11,3:14:18.06:243,18,0	1/1:9,19:28:54.16:702,54,0	1/1:12,5:16:6.65:140,7,0	1/1:12,4:14:38.96:499,39,0	1/1:11,6:17:23.91:315,24,0	1/1:9,3:12:14.77:153,15,0	1/1:12,5:17:11.93:140,12,0	1/1:3,17:20:15.05:202,15,0	0/0:19,0:18:45.11:0,45,743	1/1:12,5:17:12.04:157,12,0	1/1:6,7:13:36.06:454,36,0	0/1:6,18:23:3.87:200,0,4	1/1:6,4:9:26.81:315,27,0	1/1:7,3:9:8.82:121,9,0	1/1:4,16:20:12.04:162,12,0	1/1:6,5:11:12.04:162,12,0	1/1:3,4:7:14.92:202,15,0	1/1:19,3:22:9.03:121,9,0	1/1:2,9:11:15.05:203,15,0	1/1:14,4:17:41.79:475,42,0	1/1:15,5:20:23.77:243,24,0	1/1:2,10:11:14.98:180,15,0
chr10	21133833	.	CACACTGAG	C	423.10	PASS	AB=0.969;AC=11;AF=0.196;AN=56;BaseQRankSum=4.638;DP=622;FS=32.831;HRun=0;HaplotypeScore=132.5794;InbreedingCoeff=-0.1514;MQ=57.75;MQ0=43;MQRankSum=-6.452;QD=2.75;ReadPosRankSum=-0.248;VQSLOD=1.0385;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,1:20:24.77:0,25,98	0/1:10,0:10:21:90,0,21	0/0:100,0:18:21.04:0,21,579	0/0:118,0:32:51.01:0,51,1084	0/0:21,0:20:19.23:0,19,65	0/1:15,0:15:5.03:5,0,9	0/0:15,0:15:17.93:0,18,107	0/0:21,0:21:11.01:0,11,125	0/1:17,0:16:13.16:32,0,13	0/1:15,0:14:21.47:21,0,125	0/1:14,0:14:0.21:0,0,37	0/1:12,0:12:12.04:134,0,12	0/1:20,0:20:25.20:64,0,25	0/0:17,1:18:5.39:0,5,30	0/0:17,0:16:45.15:0,45,1168	0/1:8,9:17:7.33:82,0,7	0/1:13,0:13:6.46:78,0,6	0/0:21,0:20:7.04:0,7,52	0/1:9,0:9:20.50:47,0,21	0/0:11,0:10:7.91:0,8,28	0/0:19,0:19:7.10:0,7,51	0/0:11,0:11:9.90:0,10,36	0/0:8,0:8:12.35:0,12,45	0/0:19,1:20:6.96:0,7,24	0/1:12,0:12:3.91:4,0,27	0/0:15,0:14:14.91:0,15,161	0/0:9,1:19:6.71:0,7,69	0/0:12,0:11:13.17:0,13,69
chr10	21133835	.	CACTGAG	C	3511.60	PASS	AB=1.000;AC=49;AF=0.875;AN=56;BaseQRankSum=2.834;DP=613;FS=13.920;HRun=0;HaplotypeScore=109.4736;InbreedingCoeff=0.7103;MQ=57.67;MQ0=43;MQRankSum=1.519;QD=9.17;ReadPosRankSum=3.540;VQSLOD=1.4892;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:20:28.88:157,29,0	1/1:10,0:10:14.40:177,14,0	0/0:96,0:17:31.74:0,32,419	0/0:117,0:32:50.97:0,51,797	1/1:18,0:19:31.34:192,31,0	1/1:14,1:15:8.81:60,9,0	0/1:16,0:15:15.69:71,0,16	1/1:21,0:21:34.87:295,35,0	1/1:7,0:16:14.73:161,15,0	1/1:13,0:14:36.18:220,36,0	1/1:13,0:13:23.24:161,23,0	1/1:3,7:11:17.41:221,17,0	1/1:7,11:18:17.71:185,18,0	1/1:18,0:18:14.62:93,15,0	0/0:16,0:15:45.11:0,45,806	1/1:15,1:17:11.80:152,12,0	1/1:13,0:13:35.46:277,35,0	1/1:20,0:19:10.28:112,10,0	1/1:9,0:10:15.62:182,16,0	1/1:6,0:9:8.29:46,8,0	1/1:16,1:17:13.95:70,14,0	1/1:6,0:11:11.61:62,12,0	1/1:7,0:8:14.39:77,14,0	1/1:8,14:22:8.47:48,8,0	1/1:13,0:13:17.48:100,17,0	1/1:5,0:14:18.77:220,19,0	1/1:19,0:19:16.65:115,17,0	1/1:12,0:11:8.24:58,8,0
chr10	21133836	.	ACT	A	2827.28	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=2.695;DP=608;FS=14.230;HRun=0;HaplotypeScore=91.5743;InbreedingCoeff=0.8392;MQ=57.80;MQ0=43;MQRankSum=2.508;QD=7.42;ReadPosRankSum=3.440;VQSLOD=2.3931;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:20,1:19:31.87:172,32,0	1/1:10,0:10:14.44:121,14,0	0/0:94,0:17:29.53:0,30,418	0/0:117,0:32:56.82:0,57,793	1/1:19,1:19:31.80:192,32,0	1/1:15,0:15:8.81:60,9,0	1/1:17,0:16:20.30:109,20,0	1/1:20,1:21:34.87:295,35,0	1/1:17,0:16:13.67:70,14,0	1/1:14,0:13:36.17:192,36,0	1/1:11,2:13:23.23:161,23,0	1/1:11,0:11:17.63:121,18,0	1/1:18,0:18:15.36:76,15,0	1/1:18,0:18:14.62:93,15,0	0/0:16,0:15:45.11:0,45,649	1/1:16,1:17:11.76:78,12,0	1/1:13,0:13:34.46:221,34,0	1/1:19,0:18:10.26:92,10,0	1/1:10,0:10:13.99:152,14,0	1/1:10,0:9:8.50:46,8,0	1/1:17,0:17:13.95:70,14,0	1/1:11,0:11:11.61:62,12,0	1/1:8,0:8:14.38:77,14,0	1/1:22,0:22:8.70:48,9,0	1/1:12,1:13:14.13:81,14,0	1/1:16,0:15:25.06:219,25,0	1/1:17,1:18:16.94:105,17,0	1/1:11,1:11:11.48:62,11,0
chr10	21134307	.	CA	C	5717.48	PASS	AB=0.557;AC=36;AF=0.643;AN=56;BaseQRankSum=-5.114;DP=601;FS=2.807;HRun=13;HaplotypeScore=92.4545;InbreedingCoeff=0.8173;MQ=71.71;MQ0=0;MQRankSum=-0.826;QD=14.15;ReadPosRankSum=4.180;VQSLOD=5.3681;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,25:31:78.63:558,79,0	0/0:1,0:8:11.36:0,11,57	0/0:18,0:13:20.24:0,20,149	0/0:14,1:13:14.41:0,14,129	0/0:10,1:36:57.61:0,58,405	1/1:7,20:29:54.73:384,55,0	0/1:2,10:13:9.37:95,0,9	1/1:7,16:25:19.53:287,20,0	1/1:3,14:17:41.72:306,42,0	0/0:14,0:28:50.63:0,51,308	0/0:12,1:20:10.20:0,10,145	1/1:7,12:19:35.72:262,36,0	1/1:8,14:22:15.70:276,16,0	1/1:6,15:22:5.50:283,6,0	0/0:21,1:22:29.11:0,29,430	1/1:4,21:25:56.64:416,57,0	0/0:8,0:26:45.57:0,46,232	0/1:5,12:20:13.48:213,0,13	0/0:7,1:24:34.35:0,34,297	1/1:6,15:21:18.52:299,19,0	1/1:2,13:15:35.79:263,36,0	1/1:4,10:14:26.82:197,27,0	1/1:1,17:18:44.71:328,45,0	1/1:3,13:16:28.70:235,29,0	1/1:7,14:21:41.71:306,42,0	1/1:8,16:24:18.48:295,18,0	1/1:12,24:36:27.43:365,27,0	1/1:0,16:16:47.73:350,48,0
chr10	21135205	.	AT	A	17925.42	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=3.035;DP=785;FS=0.000;HRun=7;HaplotypeScore=82.9513;InbreedingCoeff=0.9990;MQ=80.29;MQ0=1;MQRankSum=-5.142;QD=25.61;ReadPosRankSum=3.825;VQSLOD=5.2667;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,46:48:99:1252,123,0	1/1:1,9:10:24.05:245,24,0	0/0:24,0:24:50.22:0,50,636	0/0:23,0:21:28.30:0,28,398	1/1:1,27:28:78.13:785,78,0	1/1:0,28:28:75.17:765,75,0	1/1:1,27:28:75.17:765,75,0	1/1:7,22:29:66.09:648,66,0	1/1:3,24:27:66.15:673,66,0	1/1:3,22:25:66.14:673,66,0	1/1:0,17:17:48.11:490,48,0	1/1:5,28:33:78.11:782,78,0	1/1:2,32:34:90.04:918,90,0	1/1:4,30:34:84.19:857,84,0	0/0:38,0:38:99:0,105,1270	1/1:7,24:31:63.14:643,63,0	1/1:0,30:30:75.17:765,75,0	1/1:2,19:21:51.12:520,51,0	1/1:2,23:25:69.06:666,69,0	1/1:2,14:16:38.98:374,39,0	1/1:1,36:37:95.50:978,95,0	1/1:1,21:22:57.12:581,57,0	1/1:3,21:24:51.11:520,51,0	1/1:2,28:30:75.17:765,75,0	1/1:1,26:27:72.16:735,72,0	1/1:3,40:43:99:1210,120,0	1/1:7,28:35:75.17:765,75,0	1/1:0,18:18:54.12:551,54,0
chr10	21135564	.	GT	G	1671.39	PASS	AB=0.891;AC=15;AF=0.268;AN=56;BaseQRankSum=9.925;DP=613;FS=7.243;HRun=12;HaplotypeScore=67.0571;InbreedingCoeff=0.6711;MQ=70.66;MQ0=0;MQRankSum=-0.112;QD=9.50;ReadPosRankSum=1.298;VQSLOD=2.6332;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,2:37:41.42:0,41,761	1/1:2,4:6:8.96:70,9,0	0/1:10,1:10:15.24:15,0,74	0/0:11,0:10:2.78:0,3,73	1/1:6,19:26:46.71:363,47,0	0/0:23,1:24:30.85:0,31,487	0/0:24,1:25:31.74:0,32,488	0/0:31,1:33:52.59:0,53,664	0/0:21,2:23:30.84:0,31,474	1/1:7,20:29:54.75:402,55,0	1/1:4,8:15:10.50:132,11,0	0/0:30,0:30:66.66:0,67,635	0/0:20,3:23:10.50:0,11,441	0/0:25,0:25:55.30:0,55,535	0/0:17,1:19:15.56:0,16,294	0/0:20,1:21:21.38:0,21,391	1/1:3,20:23:56.77:441,57,0	0/0:25,0:24:51.07:0,51,508	1/1:6,16:24:40.02:386,40,0	0/0:24,2:26:33.84:0,34,498	0/0:14,0:15:35.88:0,36,340	0/0:17,1:19:21.68:0,22,381	0/1:15,2:17:7.41:7,0,286	0/0:16,2:19:7.45:0,7,418	0/0:22,0:22:49.65:0,50,491	0/1:21,4:25:41.90:42,0,320	0/0:21,0:22:50.89:0,51,481	0/0:16,1:18:17.88:0,18,382
chr10	21135807	.	CG	C	11386.51	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=1.281;DP=544;FS=6.847;HRun=7;HaplotypeScore=57.3877;InbreedingCoeff=0.9474;MQ=88.89;MQ0=0;MQRankSum=-8.654;QD=23.43;ReadPosRankSum=4.700;VQSLOD=4.7779;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,23:25:54.12:550,54,0	1/1:2,6:8:18.04:184,18,0	0/0:22,0:22:57.15:0,57,678	0/0:19,0:19:43.81:0,44,498	1/1:1,16:17:48.11:489,48,0	1/1:1,11:12:33.07:336,33,0	1/1:3,21:24:57.12:580,57,0	1/1:7,22:29:66.05:647,66,0	1/1:4,20:24:57.12:579,57,0	1/1:3,14:17:4.48:354,4,0	1/1:5,8:13:27.36:259,27,0	1/1:7,17:24:54.11:549,54,0	1/1:6,18:24:35.29:503,35,0	1/1:6,16:22:52.82:506,53,0	0/0:17,0:17:39.11:0,39,479	1/1:4,21:25:57.13:581,57,0	1/1:3,28:31:75.07:750,75,0	1/1:1,23:23:63.14:643,63,0	1/1:1,12:13:36.06:359,36,0	1/1:3,12:15:33.54:337,34,0	1/1:3,22:25:60.13:612,60,0	1/1:2,11:13:27.06:275,27,0	1/1:2,8:10:21.04:214,21,0	1/1:3,18:21:48.10:489,48,0	1/1:0,14:14:36.08:367,36,0	1/1:2,12:14:33.07:335,33,0	1/1:6,23:29:60.13:612,60,0	1/1:3,10:13:27.06:275,27,0
chr10	21138324	.	G	GT	11027.13	PASS	AB=0.843;AC=51;AF=0.911;AN=56;BaseQRankSum=-5.492;DP=584;FS=1.599;HRun=11;HaplotypeScore=67.9591;InbreedingCoeff=0.4496;MQ=74.51;MQ0=0;MQRankSum=-1.654;QD=19.24;ReadPosRankSum=0.402;VQSLOD=5.8786;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,28:35:72.10:720,72,0	1/1:3,13:17:35.91:349,36,0	0/1:16,0:13:44:47,0,44	0/1:14,0:15:3.69:4,0,48	1/1:5,23:32:57.27:693,57,0	1/1:2,22:26:56.78:546,57,0	1/1:3,12:15:12.83:312,13,0	1/1:7,22:31:68.77:653,69,0	1/1:3,13:16:33.06:330,33,0	1/1:5,15:20:36.06:359,36,0	1/1:5,15:21:32.89:314,33,0	1/1:2,15:19:38.75:364,39,0	1/1:2,14:17:29:433,29,0	1/1:5,15:21:39.04:385,39,0	0/0:10,0:11:25.93:0,26,192	1/1:2,23:26:68.97:684,69,0	1/1:5,24:30:30.66:466,31,0	1/1:5,20:27:50.77:485,51,0	1/1:5,12:19:44.63:409,45,0	1/1:2,18:22:53.74:506,54,0	1/1:0,6:7:14.86:136,15,0	1/1:5,14:22:18.31:313,18,0	1/1:4,13:18:6.69:235,7,0	1/1:2,13:15:30.06:305,30,0	1/1:4,14:18:18.82:363,19,0	1/1:1,26:27:78.14:784,78,0	1/1:2,20:22:51.09:513,51,0	0/1:2,14:18:1.67:319,0,2
chr10	21138639	.	C	CA	7225.33	PASS	AB=0.715;AC=37;AF=0.661;AN=56;BaseQRankSum=-14.339;DP=669;FS=11.325;HRun=10;HaplotypeScore=93.8463;InbreedingCoeff=0.7514;MQ=80.11;MQ0=6;MQRankSum=-0.731;QD=16.84;ReadPosRankSum=0.740;VQSLOD=4.4248;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,26:32:25.71:657,26,0	0/0:11,0:11:32.96:0,33,270	0/0:52,0:28:43.36:0,43,293	0/1:58,1:32:7.49:7,0,173	0/0:37,0:37:98.84:0,99,808	1/1:5,13:18:8.44:295,8,0	0/1:6,16:22:33.98:309,0,34	1/1:6,17:24:42.37:421,42,0	1/1:5,6:11:21.93:218,22,0	0/0:27,0:27:62.19:0,62,577	0/0:23,0:23:58.52:0,59,458	1/1:6,10:17:5.27:245,5,0	1/1:10,9:19:15.90:303,16,0	1/1:1,9:10:26.94:270,27,0	0/0:30,0:30:68.88:0,69,567	0/1:4,10:14:3.59:171,0,4	0/0:38,0:38:99:0,105,847	1/1:4,14:18:32.92:334,33,0	0/0:22,0:22:61.67:0,62,483	1/1:4,17:24:59.71:568,60,0	1/1:2,11:14:11.28:310,11,0	1/1:5,12:18:8.23:265,8,0	1/1:2,24:26:60.41:684,60,0	1/1:2,6:8:21.02:213,21,0	1/1:0,24:24:51.13:544,51,0	1/1:6,15:23:50.79:508,51,0	1/1:10,18:28:18.56:392,19,0	1/1:2,16:20:50.79:508,51,0
chr10	21138963	.	G	GA	848.66	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-4.900;DP=716;FS=0.000;HRun=6;HaplotypeScore=75.4980;InbreedingCoeff=0.9976;MQ=77.00;MQ0=0;MQRankSum=-1.121;QD=29.26;ReadPosRankSum=1.017;VQSLOD=4.1764;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,132,1335	0/0:12,0:12:27.05:0,27,270	0/0:24,0:24:44.89:0,45,417	0/0:18,0:17:31.72:0,32,270	0/0:32,0:32:93.21:0,93,948	0/0:18,0:18:54.12:0,54,550	0/0:22,0:22:54.12:0,54,551	0/0:36,0:36:93.19:0,93,938	0/0:22,0:22:62.60:0,63,608	0/0:30,0:30:84.15:0,84,846	0/0:23,0:22:66.15:0,66,673	1/1:1,28:29:75.24:944,75,0	0/0:33,0:33:90.20:0,90,918	0/0:19,0:19:57.09:0,57,566	0/0:25,0:25:72.15:0,72,727	0/0:34,0:34:84.17:0,84,851	0/0:34,0:34:90.19:0,90,912	0/0:27,0:26:72.15:0,72,732	0/0:23,0:23:66.15:0,66,673	0/0:25,0:25:75.17:0,75,764	0/0:23,0:23:63.10:0,63,632	0/0:24,0:24:60.13:0,60,610	0/0:28,0:28:81.18:0,81,825	0/0:23,0:23:54.10:0,54,544	0/0:25,0:24:69.16:0,69,703	0/0:23,0:23:69.16:0,69,704	0/0:23,0:23:69.10:0,69,683	0/0:9,0:9:27.05:0,27,270
chr10	21141238	.	A	ATACTCCT	41353.14	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=1.078;DP=629;FS=3.089;HRun=0;HaplotypeScore=150.7520;InbreedingCoeff=0.9915;MQ=71.30;MQ0=0;MQRankSum=-12.334;QD=73.06;ReadPosRankSum=1.172;VQSLOD=5.4696;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,0:36:81.28:2624,81,0	1/1:1,0:11:27.05:852,27,0	0/0:17,0:17:44.33:0,44,1169	0/0:22,0:21:59.88:0,60,1369	1/1:5,0:25:57.11:1715,57,0	1/1:2,0:13:27.09:886,27,0	1/1:4,0:26:51.18:1692,51,0	1/1:9,0:36:96.28:2787,96,0	1/1:2,0:19:42.14:1413,42,0	1/1:6,1:26:63.11:1942,63,0	1/1:4,0:21:48.16:1609,48,0	1/1:2,0:31:71.95:2529,72,0	1/1:1,0:29:69.24:2338,69,0	1/1:3,0:26:63.22:2191,63,0	0/0:24,0:24:72.21:0,72,1796	1/1:5,0:23:54.01:1737,54,0	1/1:7,0:28:57.20:1941,57,0	1/1:4,0:16:36.12:1227,36,0	1/1:4,0:19:54.09:1472,54,0	1/1:2,0:19:42.14:1459,42,0	1/1:4,0:25:24.54:837,25,0	1/1:7,0:22:51.18:1649,51,0	1/1:1,0:15:42.14:1455,42,0	1/1:1,0:13:15.05:525,15,0	1/1:8,0:29:63.22:2160,63,0	1/1:3,0:25:63.16:2010,63,0	1/1:2,1:25:44.77:1580,45,0	1/1:2,0:8:21.07:722,21,0
chr10	21143646	.	GTCTCTCTCTCTCTC	G	1703.02	PASS	AB=1.000;AC=39;AF=0.750;AN=52;BaseQRankSum=1.005;DP=380;FS=5.611;HRun=0;HaplotypeScore=139.8322;InbreedingCoeff=0.3740;MQ=58.55;MQ0=15;MQRankSum=-1.865;QD=7.13;ReadPosRankSum=-0.784;VQSLOD=2.3100;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:9,0:10:3.46:24,3,0	1/1:5,1:6:3.01:81,3,0	0/0:26,0:8:6.85:0,7,79	0/0:42,0:16:5.70:0,6,56	0/0:4,2:6:0.47:0,0,1	1/1:11,0:11:3.01:100,3,0	1/1:15,0:15:9.49:130,9,0	1/1:18,0:21:8.95:111,9,0	1/1:7,0:7:6.02:117,6,0	1/1:10,0:8:3:29,3,0	1/1:15,0:15:0.47:1,0,0	./.	1/1:8,1:9:6.02:105,6,0	1/1:14,0:14:8.96:137,9,0	0/0:29,0:31:20.74:0,21,2036	1/1:10,0:9:3.01:60,3,0	1/1:12,0:12:12.04:204,12,0	./.	1/1:13,0:12:7.92:88,8,0	1/1:10,5:15:2.85:39,3,0	1/1:14,0:11:3:25,3,0	0/0:14,0:14:0.47:0,0,1	0/0:9,2:11:3.01:0,3,91	0/1:12,0:10:12.48:68,0,12	1/1:11,5:16:3.01:78,3,0	1/1:9,0:9:5.97:82,6,0	1/1:13,0:13:14.59:249,15,0	1/1:5,1:5:3.01:109,3,0
chr10	21143668	.	CTCTCTCTCTCTCTCA	C	1119.46	PASS	AB=0.952;AC=35;AF=0.648;AN=54;BaseQRankSum=3.700;DP=273;FS=0.858;HRun=0;HaplotypeScore=67.5160;InbreedingCoeff=0.0809;MQ=39.18;MQ0=35;MQRankSum=-2.592;QD=7.94;ReadPosRankSum=-0.619;VQSLOD=1.3525;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,0:7:4.34:20,4,0	1/1:3,0:3:6.49:95,6,0	0/0:41,0:7:18.48:0,18,262	0/0:42,0:2:3.01:0,3,48	0/0:4,0:4:0.94:0,1,2	1/1:14,0:13:2.59:76,3,0	0/1:11,0:9:27.70:28,0,36	0/1:9,0:7:18.21:18,0,40	1/1:3,1:4:6.02:95,6,0	0/1:5,0:4:19.68:28,0,20	1/1:2,0:2:0.47:1,0,0	1/1:3,0:2:2.84:14,3,0	1/1:2,1:2:6:58,6,0	1/1:6,0:6:3.01:75,3,0	0/0:28,0:28:74.72:0,75,2729	0/1:2,0:2:23.63:68,0,24	1/1:13,0:10:8.36:147,8,0	1/1:3,0:3:2.88:15,3,0	0/1:9,0:7:55.45:76,0,55	1/1:9,0:7:2.97:20,3,0	./.	0/0:5,0:4:0.47:0,0,1	0/0:4,0:4:3.01:0,3,76	0/1:10,0:9:7.72:43,0,8	1/1:9,0:9:3.01:60,3,0	0/1:6,0:4:9.05:21,0,9	1/1:4,2:6:14.47:205,14,0	1/1:4,0:2:3.01:104,3,0
chr10	21143691	.	CTCT	C	242.80	PASS	AB=0.929;AC=19;AF=0.396;AN=48;BaseQRankSum=0.773;DP=311;FS=6.313;HRun=0;HaplotypeScore=52.6064;InbreedingCoeff=-0.0217;MQ=39.73;MQ0=38;MQRankSum=-2.232;QD=2.29;ReadPosRankSum=0.468;VQSLOD=-0.0331;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:5,0:5:2.92:17,3,0	0/1:5,0:5:9.69:16,0,10	0/0:49,0:6:18.02:0,18,243	0/0:49,0:4:2.49:0,2,63	0/0:6,0:6:2.98:0,3,22	0/0:14,1:14:4.69:0,5,39	0/1:9,0:6:7.04:7,0,23	0/1:6,0:4:1.72:29,0,2	1/1:4,0:5:0.47:1,0,0	0/1:8,0:7:8.14:19,0,8	0/0:3,2:6:5.56:0,6,39	0/1:4,1:4:8.18:8,0,14	0/0:7,0:5:4.70:0,5,37	./.	0/0:29,0:29:74.32:0,74,1270	0/1:6,1:6:3.93:40,0,4	0/1:16,0:14:48.43:48,0,109	1/1:6,0:6:1.97:17,2,0	0/1:12,3:15:99:107,0,105	./.	./.	0/0:10,0:7:2.94:0,3,18	0/0:4,0:4:2.94:0,3,18	./.	1/1:6,0:6:2.60:16,3,0	0/0:6,0:5:0.10:0,0,4	1/1:2,1:5:3.01:31,3,0	0/1:6,1:5:15.27:15,0,34
chr10	21143701	.	C	CTGTGTG	953.20	PASS	AB=0.986;AC=21;AF=0.438;AN=48;BaseQRankSum=4.300;DP=339;FS=3.065;HRun=0;HaplotypeScore=76.1616;InbreedingCoeff=0.0624;MQ=40.03;MQ0=32;MQRankSum=-1.800;QD=7.22;ReadPosRankSum=-2.317;VQSLOD=0.7986;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:10:1.25:0,1,3	1/1:4,0:4:6.02:121,6,0	0/0:37,0:6:13.04:0,13,293	0/0:47,0:6:8.76:0,9,110	./.	0/0:13,0:12:3.01:0,3,38	0/0:12,0:9:0.64:0,1,57	0/1:10,0:9:99:109,0,209	./.	0/1:8,1:9:85.89:86,0,256	1/1:12,0:12:2.74:12,3,0	0/0:8,0:6:2.95:0,3,22	0/1:8,0:6:21.56:71,0,22	1/1:4,0:2:2.98:21,3,0	0/0:26,0:26:63.16:0,63,1506	0/1:7,0:6:0.97:13,0,1	0/1:17,0:14:99:293,0,100	0/0:4,0:4:3.77:0,4,25	0/1:16,0:16:99:215,0,273	1/1:8,0:6:1.55:4,2,0	./.	1/1:13,0:10:2.78:18,3,0	1/1:7,0:7:1.20:5,1,0	1/1:7,0:5:3.01:35,3,0	./.	0/0:10,0:9:8.30:0,8,135	0/0:6,0:6:2.64:0,3,40	0/1:10,0:7:10.61:84,0,11
chr10	21143703	.	C	CTGTGTGTG	1877.13	PASS	AB=0.921;AC=28;AF=0.560;AN=50;BaseQRankSum=1.965;DP=335;FS=3.989;HRun=0;HaplotypeScore=83.4298;InbreedingCoeff=0.0461;MQ=41.27;MQ0=29;MQRankSum=-1.939;QD=11.24;ReadPosRankSum=-2.428;VQSLOD=1.5951;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:10:0.47:0,0,2	1/1:1,0:4:6.02:159,6,0	0/0:35,0:7:14.33:0,14,340	0/0:43,0:6:7.75:0,8,129	./.	0/0:12,0:11:1.25:0,1,3	0/1:13,0:11:7.67:22,0,8	0/1:12,0:11:99:299,0,124	./.	0/1:9,0:9:99:124,0,159	1/1:6,5:13:2.04:6,2,0	0/0:8,0:6:2.66:0,3,12	1/1:6,0:7:5.77:127,6,0	1/1:4,0:2:3.01:44,3,0	0/0:25,0:25:63.19:0,63,1662	1/1:6,0:5:3.01:33,3,0	0/1:12,4:14:23.47:471,0,23	1/1:4,0:4:3.02:45,3,0	0/1:13,0:16:19.04:383,0,19	1/1:7,0:5:3:25,3,0	./.	1/1:11,0:10:1.98:6,2,0	0/0:6,0:7:0:0,0,0	1/1:7,0:5:3.01:42,3,0	1/1:7,0:6:3:26,3,0	0/1:9,0:9:10.36:10,0,92	0/1:6,0:6:1.48:2,0,1	0/1:8,0:9:24.01:188,0,24
chr10	21150809	.	G	GCTCTCTCTCT	6309.50	PASS	AB=0.950;AC=39;AF=0.750;AN=52;BaseQRankSum=-4.181;DP=591;FS=11.426;HRun=0;HaplotypeScore=184.6014;InbreedingCoeff=0.3991;MQ=60.14;MQ0=8;MQRankSum=-6.167;QD=13.14;ReadPosRankSum=-2.985;VQSLOD=2.7101;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:17,8:28:14.94:442,15,0	0/0:2,0:8:7.27:0,7,143	0/1:17,0:13:0:0,0,0	./.	0/0:15,0:29:8.43:0,8,595	1/1:20,0:32:15.05:452,15,0	1/1:13,0:13:2.90:16,3,0	1/1:39,0:38:17.57:195,18,0	1/1:12,0:18:12.04:350,12,0	0/1:11,0:21:27.87:28,0,483	0/1:17,0:21:0.45:0,0,376	./.	1/1:18,0:18:19.61:439,20,0	1/1:8,6:15:12.04:457,12,0	0/0:13,0:25:3.76:0,4,262	1/1:11,8:20:6.02:279,6,0	0/0:12,0:28:31.51:0,32,626	0/1:10,4:14:36.25:444,0,36	0/1:18,0:17:21.74:22,0,64	1/1:30,0:30:18.06:432,18,0	1/1:14,0:13:0.47:1,0,0	1/1:16,0:16:9.02:220,9,0	1/1:19,8:30:3.01:149,3,0	1/1:19,0:19:6.02:155,6,0	1/1:14,8:26:9.03:429,9,0	1/1:24,0:24:39.13:1094,39,0	1/1:15,8:22:5.08:264,5,0	1/1:21,0:19:15.03:442,15,0
chr10	21151423	.	TTGC	T	301.35	PASS	AB=0.961;AC=6;AF=0.231;AN=26;BaseQRankSum=4.903;DP=439;FS=0.000;HRun=0;HaplotypeScore=60.2507;InbreedingCoeff=0.5033;MQ=64.42;MQ0=2;MQRankSum=-0.865;QD=3.63;ReadPosRankSum=-0.047;VQSLOD=1.4979;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	./.	./.	0/0:44,0:44:69.18:0,69,1193	./.	0/0:20,0:20:39.12:0,39,707	1/1:6,1:7:3.01:39,3,0	./.	0/1:23,1:24:9.13:9,0,484	0/1:24,1:25:0.13:0,0,607	0/0:25,0:25:36.10:0,36,623	0/0:22,0:22:39.09:0,39,661	0/0:32,0:32:48.16:0,48,906	1/1:11,16:27:27.09:353,27,0	0/0:27,0:27:11.94:0,12,862	./.	./.	0/0:37,0:36:3.01:0,3,55	./.	./.	0/0:29,1:30:24.02:0,24,1092	./.	./.	0/0:12,0:12:18.06:0,18,343	./.
chr10	21151710	.	C	CT	1061.02	PASS	AB=0.787;AC=13;AF=0.232;AN=56;BaseQRankSum=-5.212;DP=558;FS=12.429;HRun=14;HaplotypeScore=86.0778;InbreedingCoeff=0.5029;MQ=70.45;MQ0=3;MQRankSum=1.501;QD=6.10;ReadPosRankSum=-2.312;VQSLOD=0.7355;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:27:33.35:0,33,204	0/1:2,6:8:1.27:114,0,1	0/0:23,0:18:10.88:0,11,54	0/1:22,0:13:3.99:4,0,26	0/1:8,14:22:5.59:197,0,6	0/0:25,0:26:39.03:0,39,242	0/0:24,1:28:10.27:0,10,180	0/0:30,0:30:40.28:0,40,255	0/0:19,1:21:28.50:0,28,179	1/1:8,8:16:8.47:193,8,0	1/1:11,3:14:15.31:120,15,0	0/0:14,0:14:11.41:0,11,74	0/0:23,0:23:23.44:0,23,153	0/0:23,0:24:25.27:0,25,155	0/0:16,0:20:20.58:0,21,224	0/0:21,0:22:40.32:0,40,254	1/1:9,12:23:5.20:243,5,0	0/0:20,1:22:11.07:0,11,191	1/1:13,14:28:38.81:325,39,0	0/0:12,0:13:13.71:0,14,83	0/0:8,0:9:12.53:0,13,68	0/0:12,0:16:22.78:0,23,119	0/0:7,0:8:3.33:0,3,37	0/0:14,0:15:19.75:0,20,121	0/0:13,0:15:24.67:0,25,146	0/0:27,0:26:25.48:0,25,160	0/1:28,3:33:12.22:12,0,193	0/1:6,1:7:17.50:17,0,30
chr10	21151747	.	T	TA	5749.64	PASS	AB=0.680;AC=33;AF=0.589;AN=56;BaseQRankSum=-7.253;DP=473;FS=16.397;HRun=11;HaplotypeScore=55.8584;InbreedingCoeff=0.3814;MQ=68.74;MQ0=0;MQRankSum=-2.182;QD=15.88;ReadPosRankSum=1.479;VQSLOD=3.9129;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,23:30:56.99:554,57,0	0/1:2,0:2:0:0,0,0	0/0:5,0:5:1.75:0,2,20	0/1:7,0:7:12.84:13,0,27	0/0:17,0:17:44.65:0,45,331	1/1:5,19:25:50.93:497,51,0	1/1:5,20:25:24.86:434,25,0	1/1:2,24:26:72.08:713,72,0	1/1:3,9:13:20.88:197,21,0	0/0:16,0:17:32.82:0,33,255	0/0:10,0:11:25.94:0,26,192	1/1:1,14:16:32.90:318,33,0	0/1:4,14:19:7.56:279,0,8	1/1:2,13:16:11.07:250,11,0	0/0:25,0:26:52.71:0,53,393	0/1:5,14:20:7.44:284,0,7	0/0:19,0:20:28.67:0,29,211	1/1:3,22:27:38.07:404,38,0	0/0:15,0:15:20.84:0,21,160	1/1:4,5:9:12.02:122,12,0	0/1:4,8:12:8.21:107,0,8	0/1:4,10:16:20.41:195,0,20	1/1:2,3:6:8.95:79,9,0	0/1:2,15:17:10.20:268,0,10	1/1:4,12:16:31.84:299,32,0	1/1:3,10:14:29.89:288,30,0	0/1:16,20:38:77.69:342,0,78	0/1:3,4:7:8.21:107,0,8
chr10	21152475	.	AATATATAT	A	177.21	PASS	AC=6;AF=0.231;AN=26;BaseQRankSum=-0.203;DP=196;FS=1.852;HRun=0;HaplotypeScore=46.0112;InbreedingCoeff=0.3967;MQ=69.36;MQ0=8;MQRankSum=-1.333;QD=5.06;ReadPosRankSum=0.248;VQSLOD=1.4911;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:6.01:0,6,99	./.	./.	0/0:28,0:5:2.22:0,2,7	1/1:7,1:8:3.01:76,3,0	./.	./.	0/0:15,0:15:3:0,3,25	./.	1/1:3,2:5:6.01:102,6,0	./.	./.	./.	./.	0/0:3,0:4:3.01:0,3,65	0/0:6,0:7:3.01:0,3,105	1/1:16,4:22:7.73:96,8,0	0/0:22,0:26:51.13:0,51,1164	./.	./.	./.	./.	./.	./.	0/0:3,0:3:3.01:0,3,111	0/0:3,0:4:3:0,3,25	0/0:5,0:8:6.02:0,6,110	0/0:4,0:4:3:0,3,25
chr10	21152624	.	GAA	G	5852.39	PASS	AB=0.713;AC=41;AF=0.732;AN=56;BaseQRankSum=-5.269;DP=441;FS=0.545;HRun=13;HaplotypeScore=86.7199;InbreedingCoeff=0.6806;MQ=66.59;MQ0=2;MQRankSum=-0.400;QD=16.96;ReadPosRankSum=3.246;VQSLOD=4.2324;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,31:38:71.32:681,71,0	0/1:1,1:7:10.61:11,0,68	0/1:24,1:11:33.97:34,0,62	0/0:15,0:9:17.64:0,18,174	0/1:6,1:14:6.03:6,0,90	1/1:4,11:16:7.95:249,8,0	1/1:3,19:23:47.98:515,48,0	1/1:5,17:22:30.27:461,30,0	1/1:3,9:13:29.77:274,30,0	0/0:5,1:16:2.16:0,2,88	0/0:0,0:7:17.34:0,17,60	1/1:1,7:10:26.51:227,27,0	1/1:3,7:10:20.99:204,21,0	1/1:3,11:15:29.77:274,30,0	0/0:10,0:13:29.53:0,30,342	1/1:0,17:18:39:428,39,0	0/0:4,0:28:50.38:0,50,172	1/1:1,10:11:24:233,24,0	0/0:3,1:16:9.87:0,10,161	1/1:4,6:10:17.98:175,18,0	1/1:5,13:18:32.08:319,32,0	1/1:7,8:16:17.90:224,18,0	1/1:2,5:7:10.93:139,11,0	1/1:3,24:27:58.44:556,58,0	1/1:2,10:12:27.01:262,27,0	1/1:4,7:11:20.97:204,21,0	1/1:4,6:10:20.70:176,21,0	1/1:2,7:9:21:204,21,0
chr10	21152872	.	AGGGGGAGGGAGACACCTGTGTTCTTT	A	8546.13	PASS	AB=0.931;AC=13;AF=0.232;AN=56;BaseQRankSum=11.476;DP=558;FS=3.337;HRun=0;HaplotypeScore=385.1701;InbreedingCoeff=0.8393;MQ=80.88;MQ0=0;MQRankSum=-8.110;QD=80.62;ReadPosRankSum=0.576;VQSLOD=3.2821;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:78.26:0,78,7768	1/1:1,6:7:12.04:832,12,0	0/0:20,0:20:8.38:0,8,1845	0/0:20,0:20:30.64:0,31,3108	1/1:1,13:14:33.11:1892,33,0	0/0:27,0:27:72.23:0,72,6685	0/0:23,0:23:66.20:0,66,5626	0/0:21,0:21:51.16:0,51,3663	0/0:18,0:18:48.12:0,48,3900	1/1:2,20:22:45.13:2753,45,0	1/1:2,9:11:15.05:877,15,0	0/0:30,0:30:87.30:0,87,8360	0/0:15,0:15:42.13:0,42,3588	0/0:13,0:13:39.11:0,39,2637	0/0:25,0:25:75.20:0,75,6305	0/0:19,0:19:51:0,51,5056	1/1:1,10:11:3.01:208,3,0	0/0:25,0:24:72.20:0,72,7073	1/1:2,12:14:36.06:1646,36,0	0/0:19,0:19:54.18:0,54,5447	0/0:29,0:29:84.24:0,84,7162	0/0:31,0:31:78.26:0,78,7566	0/0:15,0:15:45.14:0,45,4418	0/0:24,0:24:69.22:0,69,6300	0/0:20,0:20:51.17:0,51,4792	0/1:25,2:27:99:338,0,6314	0/0:20,0:20:57.19:0,57,5727	0/0:5,0:5:15.05:0,15,1586
chr10	21152898	.	TG	T	10086.47	PASS	AB=1.000;AC=42;AF=0.750;AN=56;BaseQRankSum=-4.673;DP=575;FS=6.894;HRun=8;HaplotypeScore=124.0788;InbreedingCoeff=0.6242;MQ=82.80;MQ0=0;MQRankSum=-1.780;QD=20.80;ReadPosRankSum=7.674;VQSLOD=3.2606;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:1,31:32:84.13:811,84,0	0/1:8,0:8:13.46:13,0,20	0/0:18,0:18:30.72:0,31,356	0/0:23,0:22:39.26:0,39,442	0/0:20,0:20:15.01:0,15,134	1/1:2,23:25:60.08:574,60,0	1/1:4,16:20:45.06:434,45,0	1/1:3,24:27:72.09:688,72,0	1/1:0,13:13:36.06:348,36,0	0/1:24,0:24:28.01:41,0,28	0/0:9,0:9:0.25:0,0,30	1/1:1,27:28:78.13:753,78,0	1/1:0,14:14:36.06:347,36,0	1/1:4,8:12:26.99:251,27,0	0/0:20,0:20:54.15:0,54,641	1/1:2,16:18:45.07:435,45,0	0/1:16,0:16:0.75:1,0,62	1/1:3,30:33:81.13:782,81,0	0/1:17,0:17:11.70:12,0,68	1/1:2,19:21:57.04:540,57,0	1/1:4,21:25:54.08:521,54,0	1/1:4,24:28:60.04:570,60,0	1/1:2,14:16:42.06:405,42,0	1/1:0,30:30:75.12:724,75,0	1/1:1,17:18:42.07:406,42,0	1/1:7,22:29:70.17:650,70,0	1/1:1,23:24:60.10:579,60,0	1/1:0,7:7:21.03:203,21,0
chr10	21154190	.	C	CCG	3124.54	PASS	AB=0.527;AC=30;AF=0.536;AN=56;BaseQRankSum=7.788;DP=740;FS=0.497;HRun=0;HaplotypeScore=154.7878;InbreedingCoeff=0.4122;MQ=82.69;MQ0=2;MQRankSum=-6.069;QD=7.13;ReadPosRankSum=6.457;VQSLOD=3.1555;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:49:9.26:0,9,89	1/1:0,1:6:14.78:150,15,0	0/0:23,0:23:69.16:0,69,926	0/0:18,0:18:44.16:0,44,677	1/1:2,0:28:40.31:601,40,0	1/1:1,0:17:5.66:8,6,0	0/0:3,0:40:0.02:0,0,29	0/1:6,0:33:96.47:121,0,96	0/1:2,0:20:5.70:6,0,13	1/1:2,0:23:32.89:490,33,0	1/1:1,0:10:24.05:254,24,0	0/1:4,0:40:7.20:7,0,27	1/1:1,0:33:11.01:18,11,0	0/1:1,0:21:2.75:3,0,9	0/0:25,0:24:66.22:0,66,1071	0/1:3,0:30:6.38:6,0,12	1/1:2,0:43:71.50:1077,71,0	0/0:4,0:43:4.75:0,5,52	1/1:0,0:15:44.27:422,44,0	0/0:1,0:12:1.10:0,1,18	0/0:5,0:59:2.20:0,2,44	1/1:0,0:12:4.71:6,5,0	1/1:1,0:15:7.79:14,8,0	1/1:0,0:42:26.37:99,26,0	0/0:2,0:20:1.84:0,2,27	0/1:2,0:26:7.41:7,0,12	1/1:2,0:23:3.91:9,4,0	0/0:1,0:12:0.66:0,1,7
chr10	21154396	.	TCCC	T	7010.65	PASS	AB=1.000;AC=51;AF=0.911;AN=56;BaseQRankSum=0.873;DP=485;FS=30.178;HRun=11;HaplotypeScore=121.6014;InbreedingCoeff=0.7188;MQ=79.90;MQ0=1;MQRankSum=-4.138;QD=15.93;ReadPosRankSum=4.853;VQSLOD=1.1335;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:22,2:24:36.01:345,36,0	1/1:7,1:8:12.02:128,12,0	0/0:35,0:24:24.04:0,24,361	0/1:23,0:18:0.28:0,0,118	1/1:24,0:24:39.07:400,39,0	1/1:15,1:15:26.95:235,27,0	1/1:12,0:12:18:162,18,0	1/1:21,1:22:0.35:174,0,0	1/1:18,0:18:39.01:359,39,0	1/1:14,2:16:42.06:421,42,0	1/1:13,0:13:17.61:159,18,0	1/1:16,0:16:29.99:279,30,0	1/1:14,0:14:23.99:218,24,0	1/1:14,0:14:30.01:272,30,0	0/0:9,0:9:14.52:0,15,187	1/1:17,0:17:39.04:387,39,0	1/1:47,0:47:81.12:816,81,0	1/1:14,0:14:21:192,21,0	1/1:16,0:16:42.04:451,42,0	1/1:10,0:10:8.98:90,9,0	1/1:13,0:13:9:90,9,0	1/1:14,0:14:23.97:229,24,0	1/1:11,1:12:8.97:81,9,0	1/1:10,0:10:8.99:81,9,0	1/1:12,0:12:21:187,21,0	1/1:26,1:27:66.09:691,66,0	1/1:20,2:22:39.05:384,39,0	1/1:5,1:6:18.04:181,18,0
chr10	21154403	.	CCCCCG	C	11594.27	PASS	AB=1.000;AC=49;AF=0.875;AN=56;BaseQRankSum=-1.944;DP=465;FS=30.275;HRun=0;HaplotypeScore=120.3933;InbreedingCoeff=0.6956;MQ=72.80;MQ0=1;MQRankSum=-6.141;QD=28.99;ReadPosRankSum=6.987;VQSLOD=2.5745;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,17:20:36.11:685,36,0	1/1:11,0:11:14.96:176,15,0	0/0:39,0:22:30.55:0,31,629	0/0:17,0:12:1.75:0,2,225	1/1:28,0:28:25.06:530,25,0	1/1:2,11:12:27.08:519,27,0	1/1:0,9:9:18.06:352,18,0	0/1:19,0:19:99:161,0,107	1/1:0,17:17:39.13:740,39,0	1/1:17,0:17:45.38:591,45,0	1/1:15,0:15:14.69:217,15,0	1/1:1,11:13:30.08:545,30,0	1/1:2,9:11:24.07:471,24,0	1/1:0,12:13:30.10:570,30,0	0/0:9,0:9:23.43:0,23,352	1/1:1,15:16:39.13:704,39,0	1/1:46,0:46:63.29:1076,63,0	1/1:0,12:12:21.07:413,21,0	1/1:16,0:17:50.19:567,50,0	1/1:11,0:11:17.66:189,18,0	1/1:12,0:12:9.02:142,9,0	1/1:1,10:12:26.88:444,27,0	1/1:1,9:10:9.03:177,9,0	1/1:0,7:7:9.03:177,9,0	1/1:1,10:11:21.07:408,21,0	1/1:32,0:32:39.29:911,39,0	1/1:18,0:18:39.13:582,39,0	1/1:10,0:10:18.06:248,18,0
chr10	21154404	.	CCCCGG	C	14327.08	PASS	AB=1.000;AC=51;AF=0.911;AN=56;BaseQRankSum=-3.434;DP=455;FS=15.624;HRun=0;HaplotypeScore=109.2396;InbreedingCoeff=0.6890;MQ=73.26;MQ0=1;MQRankSum=-4.830;QD=35.12;ReadPosRankSum=6.591;VQSLOD=3.5566;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:19:36.12:685,36,0	1/1:2,9:11:15.02:245,15,0	0/0:39,0:22:34.38:0,34,614	0/1:17,0:12:13.95:14,0,168	1/1:1,26:28:42.06:802,42,0	1/1:12,0:11:27.09:519,27,0	1/1:9,0:9:18.06:352,18,0	1/1:8,10:18:9.42:362,9,0	1/1:17,0:17:39.13:740,39,0	1/1:3,14:17:48.11:856,48,0	1/1:2,12:15:18.48:311,18,0	1/1:13,0:13:12.43:525,12,0	1/1:10,0:11:24.07:471,24,0	1/1:13,0:13:30.10:571,30,0	0/0:8,0:8:21.50:0,22,298	1/1:15,0:16:39.13:704,39,0	1/1:1,42:44:84.26:1667,84,0	1/1:12,0:12:21.06:413,21,0	1/1:1,16:17:51.14:813,51,0	1/1:1,9:10:17.35:268,17,0	1/1:0,10:10:9.02:186,9,0	1/1:11,1:12:27.09:462,27,0	1/1:10,0:10:9.03:177,9,0	1/1:7,0:7:9.03:177,9,0	1/1:10,0:11:21.07:408,21,0	1/1:2,29:31:79.90:1431,80,0	1/1:3,15:18:39.13:798,39,0	1/1:1,9:10:18.06:373,18,0
chr10	21154405	.	CCCGG	C	8356.71	PASS	AB=1.000;AC=51;AF=0.911;AN=56;BaseQRankSum=-0.798;DP=457;FS=11.382;HRun=0;HaplotypeScore=125.8382;InbreedingCoeff=0.6817;MQ=75.85;MQ0=1;MQRankSum=-5.106;QD=20.53;ReadPosRankSum=6.687;VQSLOD=3.4870;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:19:36.05:366,36,0	1/1:11,0:11:15:150,15,0	0/0:42,0:25:13.68:0,14,481	0/1:17,0:12:24.38:24,0,111	1/1:28,0:28:42.04:461,42,0	1/1:12,0:11:27.05:273,27,0	1/1:9,0:9:18.04:190,18,0	1/1:16,0:16:27.96:302,28,0	1/1:17,0:17:39.04:393,39,0	1/1:16,1:17:48.10:549,48,0	1/1:14,2:16:18.50:222,18,0	1/1:13,0:13:12.38:280,12,0	1/1:11,0:11:24.05:252,24,0	1/1:13,0:13:30.07:316,30,0	0/0:8,0:8:17.05:0,17,197	1/1:16,0:16:38.96:375,39,0	1/1:44,0:44:84.25:966,84,0	1/1:12,0:12:21.05:221,21,0	1/1:17,0:17:50.89:496,51,0	1/1:9,1:10:17.26:186,17,0	1/1:10,0:10:9.02:104,9,0	1/1:12,0:12:27.02:272,27,0	1/1:10,0:10:9.01:94,9,0	1/1:7,0:7:9.02:94,9,0	1/1:11,0:11:21.05:226,21,0	1/1:30,1:31:79.83:891,80,0	1/1:17,1:18:39.11:444,39,0	1/1:10,0:10:18.05:209,18,0
chr10	21154417	.	GGT	G	262.57	PASS	AB=0.972;AC=26;AF=0.464;AN=56;BaseQRankSum=10.796;DP=472;FS=39.660;HRun=0;HaplotypeScore=136.9667;InbreedingCoeff=-0.3943;MQ=76.62;MQ0=1;MQRankSum=-10.449;QD=0.68;ReadPosRankSum=7.415;VQSLOD=0.8029;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:26,2:28:54.29:54,0,101	0/1:7,1:8:11.86:12,0,53	0/0:34,0:23:40.28:0,40,543	0/0:16,0:12:10.10:0,10,59	0/1:28,0:28:9.03:9,0,110	0/1:10,1:10:13.21:22,0,13	0/1:9,0:9:0.14:0,0,39	0/1:18,1:19:6.44:6,0,238	0/1:18,0:18:3.64:32,0,4	0/1:17,2:19:48.93:49,0,87	0/0:16,1:17:3.19:0,3,100	0/1:14,0:14:8.80:9,0,49	0/1:12,0:12:6.81:7,0,27	0/1:13,0:13:5.86:8,0,6	0/0:8,0:8:21.52:0,22,322	0/1:17,0:17:2.52:3,0,50	0/1:44,0:44:16.85:17,0,125	0/0:13,0:13:3.78:0,4,65	0/1:20,0:20:6.42:6,0,102	0/1:11,0:11:18.83:19,0,34	1/1:9,0:9:2.02:7,2,0	0/1:13,0:13:9.70:14,0,10	1/1:8,1:9:3.38:8,3,0	1/1:8,0:8:1.93:4,2,0	0/1:10,0:10:13.87:14,0,37	0/1:32,1:33:59.10:59,0,130	0/1:17,1:18:36.55:38,0,37	0/1:12,1:13:10.65:11,0,52
chr10	21154859	.	G	GC	25967.54	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-11.792;DP=697;FS=0.000;HRun=0;HaplotypeScore=60.5661;InbreedingCoeff=0.9996;MQ=86.94;MQ0=0;MQRankSum=-9.735;QD=42.43;ReadPosRankSum=4.115;VQSLOD=5.2966;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,52:52:99:2398,151,0	1/1:0,13:13:36.12:576,36,0	0/0:26,0:26:78.26:0,78,1090	0/0:21,0:21:63.16:0,63,810	1/1:1,34:35:93.32:1485,93,0	1/1:2,20:21:60.20:959,60,0	1/1:1,26:27:72.25:1151,72,0	1/1:2,21:23:60.20:951,60,0	1/1:1,21:22:57.19:911,57,0	1/1:0,27:27:78.27:1243,78,0	1/1:0,22:22:60.20:948,60,0	1/1:0,18:18:48.16:767,48,0	1/1:1,14:15:30.10:480,30,0	1/1:1,21:22:45.15:720,45,0	0/0:38,0:38:99:0,114,1591	1/1:0,26:26:69.24:1103,69,0	1/1:1,33:34:90.31:1439,90,0	1/1:0,24:24:60.20:959,60,0	1/1:2,14:17:48.10:703,48,0	1/1:0,27:27:68.91:1103,69,0	1/1:0,27:26:66.23:1055,66,0	1/1:2,20:23:66.21:1019,66,0	1/1:0,18:18:54.18:863,54,0	1/1:1,28:29:81.28:1293,81,0	1/1:0,21:21:60.20:958,60,0	1/1:2,24:26:72.23:1114,72,0	1/1:0,31:30:81.28:1292,81,0	1/1:1,10:11:30.10:476,30,0
chr10	21155822	.	TCTTCTC	T	4895.79	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=3.355;DP=733;FS=9.850;HRun=0;HaplotypeScore=199.0680;InbreedingCoeff=0.9996;MQ=54.65;MQ0=2;MQRankSum=-9.852;QD=39.80;ReadPosRankSum=-1.152;VQSLOD=3.6407;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:69.10:0,69,1927	1/1:1,15:16:32.89:662,33,0	0/0:39,0:22:33.51:0,34,1310	0/0:41,0:34:87.56:0,88,2488	1/1:2,21:23:35.75:416,36,0	0/0:23,0:23:54.15:0,54,1573	0/0:27,0:27:72.20:0,72,2124	0/0:38,0:38:96.25:0,96,2711	0/0:19,0:19:42.14:0,42,1399	1/1:0,27:27:81.10:1589,81,0	1/1:1,17:18:36.08:625,36,0	0/0:38,0:38:99:0,102,3247	0/0:26,0:26:72.24:0,72,2293	0/0:30,0:30:84.23:0,84,2478	0/0:29,0:29:81.26:0,81,2572	0/0:26,0:26:69.22:0,69,2057	1/1:6,13:19:42.08:851,42,0	0/0:11,0:11:27.09:0,27,865	1/1:7,13:20:42.03:753,42,0	0/0:23,0:23:57.20:0,57,1837	0/0:21,0:21:51.12:0,51,1382	0/0:41,0:41:99:0,111,3461	0/0:16,0:16:45.15:0,45,1504	0/0:35,0:35:82.48:0,82,2688	0/0:22,0:22:54.16:0,54,1598	0/0:31,0:31:84.27:0,84,2620	0/0:28,0:28:45.15:0,45,1355	0/0:15,0:15:42.10:0,42,1204
chr10	21155891	.	CCATCATCACCAT	C	8350.12	PASS	AB=0.928;AC=28;AF=0.500;AN=56;BaseQRankSum=-4.157;DP=846;FS=13.174;HRun=0;HaplotypeScore=280.1402;InbreedingCoeff=0.2654;MQ=41.80;MQ0=96;MQRankSum=-1.581;QD=13.96;ReadPosRankSum=-3.582;VQSLOD=1.9402;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:38,0:27:63.72:897,64,0	0/0:16,0:16:34.51:0,35,647	0/0:15,0:5:14.87:0,15,161	0/0:25,0:10:25.46:0,25,291	0/0:32,0:24:23.44:0,23,267	0/1:23,0:21:25.48:185,0,25	1/1:40,0:34:39.78:307,40,0	0/1:22,33:41:6.53:1258,0,7	1/1:19,0:18:33.76:298,34,0	0/0:33,0:26:64.53:0,65,812	0/0:27,0:22:16.71:0,17,261	0/1:32,0:30:99:537,0,248	0/1:22,0:22:99:528,0,372	0/1:31,0:30:99:556,0,477	0/0:40,0:40:99:0,114,3533	1/1:35,0:34:53.54:474,54,0	0/0:27,0:24:36.03:0,36,1065	1/1:26,0:25:43.69:608,44,0	0/0:33,0:16:35.83:0,36,506	1/1:24,0:18:10.75:121,11,0	1/1:49,0:34:3.25:105,3,0	0/1:30,0:24:99:425,0,197	0/1:21,0:14:47.68:196,0,48	0/1:67,0:66:99:299,0,708	0/1:22,0:19:90.32:305,0,90	1/1:29,0:26:54.34:748,54,0	0/1:13,0:27:21.25:242,0,21	1/1:8,0:7:18.03:261,18,0
chr10	21155893	.	AT	A	1382.96	PASS	AB=0.839;AC=20;AF=0.357;AN=56;BaseQRankSum=3.634;DP=851;FS=4.600;HRun=1;HaplotypeScore=213.2424;InbreedingCoeff=-0.0420;MQ=42.26;MQ0=93;MQRankSum=0.023;QD=2.49;ReadPosRankSum=2.576;VQSLOD=-0.2313;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:33,7:29:25.77:257,26,0	0/0:17,0:17:39.03:0,39,553	0/0:15,0:5:15.05:0,15,218	0/0:23,0:10:24.94:0,25,342	0/0:33,0:26:20.01:0,20,334	0/0:16,7:22:4.95:0,5,76	0/1:29,13:36:5.64:6,0,63	0/1:49,4:40:99:105,0,120	0/1:12,8:19:15.10:52,0,15	0/0:31,0:24:72.12:0,72,996	0/0:26,0:22:19.49:0,19,254	0/1:30,3:31:45.98:144,0,46	0/1:17,5:22:70.32:70,0,119	0/1:25,4:28:99:120,0,121	0/0:41,0:41:99:0,117,1846	0/1:20,16:35:1.90:116,0,2	0/0:27,0:24:36.12:0,36,573	0/1:19,6:24:35.81:99,0,36	0/0:33,0:16:39.13:0,39,612	0/0:23,3:20:3.49:0,3,40	0/1:47,2:35:9.57:34,0,10	0/1:27,2:23:76.87:114,0,77	0/1:20,1:14:31.22:61,0,31	0/1:66,3:68:99:127,0,152	0/1:15,7:19:27.32:27,0,102	1/1:23,8:28:6.97:117,7,0	1/1:14,13:27:13.75:81,14,0	0/1:4,4:7:2.15:23,0,2
chr10	21155894	.	TCATCACCATCAC	T	5845.12	PASS	AB=0.967;AC=30;AF=0.536;AN=56;BaseQRankSum=0.025;DP=848;FS=21.477;HRun=0;HaplotypeScore=295.9290;InbreedingCoeff=0.0919;MQ=42.41;MQ0=89;MQRankSum=-1.568;QD=8.82;ReadPosRankSum=-5.344;VQSLOD=1.5709;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:40,0:30:32.80:627,33,0	0/0:17,0:17:11.65:0,12,451	0/0:14,0:4:7.74:0,8,45	0/0:22,0:9:13.59:0,14,169	0/0:31,0:25:4.40:0,4,114	0/1:24,0:23:13.84:363,0,14	1/1:41,0:35:13.93:145,14,0	1/1:53,0:40:20.51:733,21,0	1/1:20,0:19:26.08:286,26,0	0/1:33,0:26:8.83:9,0,322	0/1:28,0:24:52.19:52,0,124	0/1:33,0:31:99:280,0,205	0/1:23,0:23:99:318,0,302	0/1:29,0:28:99:341,0,410	0/0:42,0:42:99:0,108,3170	1/1:35,0:34:33.99:428,34,0	0/0:26,0:23:29.53:0,30,812	1/1:25,0:24:32.44:417,32,0	0/0:33,0:16:13.24:0,13,258	0/1:12,14:20:6.89:84,0,7	1/1:50,0:36:3.48:138,3,0	0/1:26,0:21:99:231,0,217	0/1:19,0:13:61.23:90,0,61	0/1:69,0:68:99:104,0,688	0/1:23,0:20:61.89:180,0,62	1/1:13,17:28:57.36:690,57,0	0/1:27,0:27:54.78:188,0,55	1/1:8,0:7:14.94:141,15,0
chr10	21155895	.	CAT	C	2392.23	PASS	AB=0.867;AC=26;AF=0.464;AN=56;BaseQRankSum=3.685;DP=847;FS=9.489;HRun=0;HaplotypeScore=218.4311;InbreedingCoeff=0.1254;MQ=42.52;MQ0=87;MQRankSum=2.875;QD=3.95;ReadPosRankSum=2.073;VQSLOD=1.7058;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:34,7:31:32.67:362,33,0	0/0:17,0:17:39.03:0,39,579	0/0:14,0:4:9.03:0,9,141	0/0:21,0:8:21.07:0,21,394	0/0:31,0:25:21.67:0,22,272	0/1:17,7:23:22.85:23,0,85	0/1:28,13:35:18.06:18,0,22	0/1:49,4:40:95.40:177,0,95	1/1:12,8:19:7.25:112,7,0	0/0:34,0:27:81.10:0,81,1063	0/0:28,0:24:16.05:0,16,234	0/1:31,3:32:3.64:242,0,4	0/1:19,4:24:91.87:150,0,92	0/1:26,4:29:88.43:214,0,88	0/0:40,0:40:99:0,114,2219	1/1:17,16:32:17.19:168,17,0	0/0:26,0:23:36.12:0,36,695	0/1:19,5:24:49.01:149,0,49	0/0:31,0:15:39.12:0,39,584	0/1:23,3:20:6.71:7,0,12	1/1:49,2:38:3.01:69,3,0	0/1:24,2:21:66.48:124,0,66	0/1:20,1:14:8.27:89,0,8	0/1:65,3:67:97.72:204,0,98	0/1:16,7:20:56.14:56,0,118	1/1:22,8:28:20.69:217,21,0	1/1:14,13:27:23.86:156,24,0	1/1:4,3:7:7.10:43,7,0
chr10	21155897	.	TCAC	T	3049.12	PASS	AB=0.985;AC=28;AF=0.500;AN=56;BaseQRankSum=3.279;DP=852;FS=2.308;HRun=0;HaplotypeScore=230.1289;InbreedingCoeff=-0.1865;MQ=42.49;MQ0=85;MQRankSum=-2.536;QD=4.17;ReadPosRankSum=-1.655;VQSLOD=2.2316;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:40,0:31:31.84:234,0,32	0/1:17,0:17:58.95:59,0,247	0/0:12,0:3:6:0,6,53	0/0:20,0:8:12.79:0,13,157	0/1:32,1:27:82.63:83,0,97	0/0:23,0:22:18.55:0,19,144	0/1:39,0:33:0.59:1,0,24	0/1:53,0:40:64.03:213,0,64	0/1:21,0:20:1.75:98,0,2	0/1:30,1:24:99:138,0,228	0/1:29,0:25:71.80:72,0,110	1/1:33,3:34:12.64:383,13,0	0/1:25,0:26:18.08:273,0,18	0/1:30,1:30:0.91:323,0,1	0/0:39,0:39:99:0,108,2296	1/1:33,0:32:15.09:190,15,0	0/0:26,0:23:35.88:0,36,518	1/1:26,0:25:21.11:140,21,0	0/1:30,0:15:6.95:7,0,248	0/1:25,0:19:11.69:12,0,14	0/1:52,0:40:9.01:47,0,9	0/1:25,4:24:34.67:177,0,35	1/1:19,1:13:1.65:68,2,0	0/1:67,1:67:62.16:222,0,62	0/1:25,0:22:58.53:59,0,98	0/1:30,0:28:4.59:190,0,5	1/1:28,0:28:29.37:183,29,0	0/1:9,0:8:6.28:45,0,6
chr10	21155903	.	TCAC	T	6271.72	PASS	AB=0.972;AC=40;AF=0.714;AN=56;BaseQRankSum=2.360;DP=872;FS=15.252;HRun=0;HaplotypeScore=221.7731;InbreedingCoeff=0.2209;MQ=43.58;MQ0=78;MQRankSum=-2.029;QD=8.09;ReadPosRankSum=-5.085;VQSLOD=1.5079;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:40,5:38:54.77:602,55,0	0/1:16,0:16:26.60:165,0,27	0/0:12,0:3:5.83:0,6,34	0/0:17,0:5:12.71:0,13,85	1/1:30,0:25:35.75:304,36,0	1/1:6,16:22:4.85:153,5,0	0/1:39,2:35:4.66:97,0,5	1/1:57,0:43:20.44:277,20,0	1/1:6,14:20:1.42:222,1,0	1/1:35,0:28:43.85:426,44,0	1/1:28,0:24:13.62:175,14,0	1/1:34,0:32:16.98:399,17,0	0/1:30,0:30:7.93:295,0,8	0/1:34,0:33:7.06:368,0,7	0/0:41,0:41:98.36:0,98,1540	1/1:10,23:33:41.98:500,42,0	0/0:27,0:23:8.23:0,8,113	1/1:10,17:26:18.29:314,18,0	0/1:30,0:15:20.72:179,0,21	1/1:23,1:19:11.74:95,12,0	1/1:14,36:39:17.91:173,18,0	0/1:25,4:24:22.58:174,0,23	1/1:22,1:16:4.06:102,4,0	0/1:66,0:65:59.36:233,0,59	0/1:33,2:32:20.69:86,0,21	1/1:23,5:27:57.62:544,58,0	1/1:25,4:29:32.79:306,33,0	1/1:9,0:8:12.81:82,13,0
chr10	21155904	.	C	CATT	1937.13	PASS	AB=1.000;AC=12;AF=0.214;AN=56;BaseQRankSum=-6.074;DP=867;FS=0.940;HRun=0;HaplotypeScore=241.2296;InbreedingCoeff=0.4706;MQ=43.96;MQ0=77;MQRankSum=-0.546;QD=8.39;ReadPosRankSum=-1.645;VQSLOD=2.5119;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:38:74.78:0,75,590	1/1:17,0:17:32.82:354,33,0	0/0:12,0:3:6.02:0,6,85	0/0:17,0:5:12.93:0,13,211	1/1:31,0:26:27.57:229,28,0	0/0:22,0:22:23.95:0,24,236	0/0:40,0:34:16.83:0,17,114	0/0:56,0:43:84.25:0,84,672	0/0:20,0:20:26.79:0,27,225	1/1:35,1:28:9.11:527,9,0	0/1:28,0:24:35.14:179,0,35	0/1:35,0:33:32.72:33,0,235	0/1:26,0:26:9.19:9,0,268	0/0:35,0:34:18.09:0,18,362	0/0:41,0:41:99:0,114,1857	0/0:32,0:32:41.76:0,42,338	1/1:9,19:25:18.93:581,19,0	0/0:26,0:25:37.51:0,38,277	0/1:29,0:15:35.12:192,0,35	0/0:24,0:19:8.65:0,9,63	0/0:48,0:37:16.44:0,16,125	0/0:30,0:25:5.86:0,6,201	0/0:21,0:14:0.68:0,1,96	0/0:66,0:65:60.17:0,60,435	0/0:37,0:34:18.37:0,18,188	0/0:28,0:27:48.31:0,48,402	0/0:29,0:29:9.22:0,9,174	0/0:7,0:6:11.76:0,12,78
chr10	21155905	.	A	ATTAT	1525.52	PASS	AB=0.896;AC=9;AF=0.161;AN=56;BaseQRankSum=-5.600;DP=847;FS=3.540;HRun=0;HaplotypeScore=241.4115;InbreedingCoeff=0.5651;MQ=44.46;MQ0=73;MQRankSum=-0.516;QD=9.59;ReadPosRankSum=0.150;VQSLOD=3.0329;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:38:75.34:0,75,879	1/1:14,3:17:24.07:379,24,0	0/0:11,0:3:6.02:0,6,94	0/0:17,0:5:12.93:0,13,253	1/1:27,0:23:10.13:161,10,0	0/0:22,0:22:24.08:0,24,317	0/0:42,0:36:17:0,17,171	0/0:56,0:43:83.97:0,84,1109	0/0:20,0:20:27.09:0,27,349	0/1:27,7:26:3.47:520,0,3	0/1:22,3:21:71.12:96,0,71	0/0:35,0:33:22.03:0,22,455	0/0:24,0:24:36.96:0,37,550	0/0:35,0:34:62:0,62,612	0/0:40,0:40:99:0,114,2255	0/0:32,0:32:42.12:0,42,491	1/1:28,0:24:11.01:406,11,0	0/0:25,0:24:38.83:0,39,451	0/1:27,1:15:48.84:114,0,49	0/0:23,0:19:8.76:0,9,93	0/0:47,0:37:18.05:0,18,212	0/0:28,0:25:33.93:0,34,367	0/0:21,0:14:12.13:0,12,123	0/0:65,0:64:64.41:0,64,691	0/0:36,0:33:17.84:0,18,230	0/0:28,0:27:46.32:0,46,559	0/0:28,0:28:12.42:0,12,308	0/0:7,0:6:8.60:0,9,110
chr10	21155906	.	C	CAT	582.49	PASS	AB=0.958;AC=12;AF=0.214;AN=56;BaseQRankSum=-5.451;DP=854;FS=17.549;HRun=0;HaplotypeScore=227.2405;InbreedingCoeff=-0.1256;MQ=44.55;MQ0=70;MQRankSum=2.671;QD=1.92;ReadPosRankSum=-4.834;VQSLOD=-0.0966;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:40:12.90:0,13,335	0/1:14,3:17:32.85:117,0,33	0/0:11,0:3:6.02:0,6,86	0/0:17,0:5:12.93:0,13,175	0/1:27,0:23:15.50:15,0,59	0/0:23,0:23:13.37:0,13,88	0/0:43,0:37:14.62:0,15,102	0/0:54,0:41:68.22:0,68,830	0/0:20,0:20:23.31:0,23,150	0/1:30,7:29:99:201,0,214	0/1:22,3:21:1.11:1,0,81	0/1:35,0:33:99:116,0,204	0/1:26,0:26:38.31:38,0,259	0/1:36,0:35:11.52:12,0,310	0/0:38,0:39:99:0,108,1589	0/0:33,0:33:21.38:0,21,174	1/1:28,0:24:5.10:167,5,0	0/0:26,0:25:32.90:0,33,229	0/0:29,1:17:1.90:0,2,213	0/1:23,0:19:25.59:26,0,33	0/0:46,0:37:10:0,10,61	0/0:28,0:25:26.98:0,27,212	0/1:21,0:14:22.09:22,0,57	0/0:65,0:64:65.31:0,65,397	0/0:37,0:34:17.66:0,18,151	0/1:28,0:27:10.29:10,0,242	0/0:26,0:26:4.11:0,4,140	0/0:6,0:6:10.53:0,11,77
chr10	21155911	.	A	ATCG	3129.11	PASS	AB=0.961;AC=23;AF=0.411;AN=56;BaseQRankSum=-2.454;DP=880;FS=18.523;HRun=0;HaplotypeScore=235.1568;InbreedingCoeff=0.0259;MQ=45.33;MQ0=61;MQRankSum=-2.375;QD=5.40;ReadPosRankSum=-2.165;VQSLOD=0.9495;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:48,0:43:99:603,0,157	0/1:18,0:18:29.38:29,0,93	0/0:13,0:3:3:0,3,28	0/0:19,0:6:14.91:0,15,113	0/0:27,0:23:10.77:0,11,132	1/1:24,0:24:14.02:394,14,0	1/1:30,15:41:14.20:130,14,0	0/1:53,0:40:90.86:241,0,91	0/1:20,0:20:24.20:192,0,24	0/1:37,0:31:4.54:5,0,380	0/0:24,0:22:7.40:0,7,157	0/1:34,0:33:12.47:12,0,235	0/0:25,0:25:9.54:0,10,285	0/0:35,0:34:25.74:0,26,349	0/0:37,0:37:99:0,105,1284	1/1:37,0:37:20:388,20,0	0/1:31,0:27:59.49:122,0,59	0/1:28,0:27:68.99:210,0,69	0/0:27,0:17:15.33:0,15,238	0/1:24,0:20:4.56:115,0,5	1/1:55,0:46:2.83:255,3,0	0/0:30,0:27:11.13:0,11,178	0/1:19,0:14:0.47:0,0,74	0/0:64,0:63:53.77:0,54,386	0/1:18,23:38:28.93:29,0,57	1/1:33,0:32:25.06:419,25,0	0/1:25,0:25:43.75:108,0,44	0/1:5,1:6:27.93:52,0,28
chr10	21157691	.	CT	C	3805.22	PASS	AB=0.900;AC=49;AF=0.875;AN=56;BaseQRankSum=2.590;DP=361;FS=2.057;HRun=3;HaplotypeScore=52.2197;InbreedingCoeff=0.5482;MQ=39.91;MQ0=39;MQRankSum=-0.927;QD=12.56;ReadPosRankSum=1.244;VQSLOD=2.1876;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,0:6:6.01:61,6,0	1/1:2,5:4:5.78:74,6,0	0/0:24,0:3:6.02:0,6,83	0/0:23,0:5:12.03:0,12,153	1/1:11,2:12:13.28:151,13,0	1/1:10,2:11:6.02:66,6,0	1/1:6,3:8:0.58:66,1,0	1/1:30,6:12:31.16:341,31,0	1/1:5,1:6:13.75:113,14,0	1/1:5,3:6:14.95:154,15,0	1/1:2,9:9:18.04:200,18,0	1/1:3,14:14:26.15:371,26,0	1/1:14,4:16:10.76:117,11,0	1/1:10,3:11:11.63:131,12,0	0/0:11,0:11:30.09:0,30,406	1/1:1,11:9:18.05:218,18,0	1/1:3,3:5:11.94:113,12,0	0/1:8,1:9:6.77:43,0,7	1/1:6,5:6:16.29:184,16,0	1/1:11,1:9:5.05:41,5,0	1/1:4,2:5:6.01:65,6,0	1/1:13,1:13:14.54:146,15,0	1/1:7,1:7:12.58:101,13,0	1/1:3,11:14:23.17:226,23,0	1/1:10,6:15:18.92:200,19,0	1/1:9,4:11:31.12:338,31,0	1/1:13,1:13:4.18:39,4,0	1/1:2,10:10:21.06:245,21,0
chr10	21157692	.	T	TTC	4737.14	PASS	AB=0.643;AC=49;AF=0.875;AN=56;BaseQRankSum=2.012;DP=349;FS=0.962;HRun=0;HaplotypeScore=53.1353;InbreedingCoeff=0.5941;MQ=39.88;MQ0=33;MQRankSum=-1.284;QD=16.33;ReadPosRankSum=1.238;VQSLOD=4.5966;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,5:6:6.02:93,6,0	1/1:7,0:4:5.85:74,6,0	0/0:24,0:3:6.02:0,6,83	0/0:23,0:5:11.90:0,12,134	1/1:2,10:11:13.86:189,14,0	1/1:4,8:11:6.02:89,6,0	1/1:9,0:8:10.01:82,10,0	1/1:25,0:12:19.41:318,19,0	1/1:2,4:6:15.05:237,15,0	1/1:7,0:5:15.05:209,15,0	1/1:9,1:8:18.05:240,18,0	1/1:17,0:14:31.43:325,31,0	1/1:5,11:15:12.04:191,12,0	1/1:6,7:11:12.04:178,12,0	0/0:11,0:11:30.09:0,30,419	1/1:12,0:9:16.83:142,17,0	1/1:5,0:5:11.85:111,12,0	0/1:4,4:9:9.08:45,0,9	1/1:12,0:8:22.47:236,22,0	1/1:2,10:9:6.02:112,6,0	1/1:5,0:4:6.02:110,6,0	1/1:4,9:12:15.43:168,15,0	1/1:3,5:7:13.59:205,14,0	1/1:12,0:12:23.02:255,23,0	1/1:9,6:14:19.30:249,19,0	1/1:7,6:11:33.11:453,33,0	1/1:2,12:13:5.70:111,6,0	1/1:12,0:10:21.07:316,21,0
chr10	21157693	.	T	TCC	3160.88	PASS	AB=0.954;AC=46;AF=0.821;AN=56;BaseQRankSum=1.568;DP=341;FS=2.951;HRun=0;HaplotypeScore=58.4538;InbreedingCoeff=0.3869;MQ=38.11;MQ0=31;MQRankSum=-2.002;QD=11.33;ReadPosRankSum=0.149;VQSLOD=2.7625;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,1:6:6.02:80,6,0	1/1:5,2:4:5.69:35,6,0	0/0:25,0:3:6.02:0,6,97	0/0:26,0:5:11.51:0,12,124	1/1:10,0:9:11.95:111,12,0	1/1:10,1:10:6.02:73,6,0	0/1:7,0:6:1.98:88,0,2	1/1:30,0:12:28.69:410,29,0	1/1:6,1:7:17.97:190,18,0	1/1:5,2:6:17.96:247,18,0	1/1:10,0:8:17.01:101,17,0	0/1:15,2:14:4.35:155,0,4	1/1:15,1:14:11.73:106,12,0	1/1:10,2:10:12:131,12,0	0/0:11,0:11:30.09:0,30,465	0/1:11,1:9:15.99:58,0,16	1/1:5,1:5:11.65:84,12,0	0/1:8,0:8:13.86:25,0,14	1/1:14,0:9:26.36:273,26,0	1/1:10,1:8:8.61:83,9,0	1/1:5,0:4:6.01:63,6,0	1/1:8,3:10:4.45:109,4,0	1/1:5,2:6:12.03:133,12,0	1/1:12,0:12:19.54:125,20,0	1/1:13,1:13:17.27:114,17,0	1/1:11,2:11:31.94:298,32,0	1/1:12,1:12:5.63:73,6,0	1/1:12,0:10:20.20:146,20,0
chr10	21157696	.	TTCC	T	1187.67	PASS	AB=1.000;AC=41;AF=0.732;AN=56;BaseQRankSum=1.191;DP=316;FS=1.669;HRun=0;HaplotypeScore=61.0223;InbreedingCoeff=0.2148;MQ=37.21;MQ0=19;MQRankSum=-0.467;QD=4.93;ReadPosRankSum=-0.336;VQSLOD=1.6926;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:5,0:5:5.92:38,6,0	1/1:7,0:4:2.76:18,3,0	0/0:28,0:5:6.02:0,6,103	0/0:31,0:6:17.88:0,18,222	1/1:10,0:9:8.51:39,9,0	1/1:8,2:9:5.69:57,6,0	0/1:3,0:2:1.09:12,0,1	1/1:18,0:11:12.49:130,12,0	1/1:6,1:7:4.03:72,4,0	1/1:8,0:6:12.33:50,12,0	1/1:10,0:8:11.90:101,12,0	1/1:17,0:14:3.35:68,3,0	0/1:14,0:12:4.74:36,0,5	0/1:12,0:10:3.03:48,0,3	0/0:9,0:9:12.08:0,12,481	1/1:11,0:8:11.85:59,12,0	0/1:6,0:5:6.37:22,0,6	0/0:7,0:7:0.28:0,0,36	1/1:14,0:9:18.66:109,19,0	0/1:11,0:8:3.61:29,0,4	1/1:4,0:3:5.92:39,6,0	1/1:10,0:9:2.32:34,2,0	1/1:6,0:5:1.06:10,1,0	1/1:12,1:13:1.40:73,1,0	1/1:11,2:12:17.02:165,17,0	0/1:11,0:9:2.02:44,0,2	0/1:12,0:11:10.02:11,0,10	1/1:9,0:8:13.91:68,14,0
chr10	21157699	.	CTCT	C	1063.51	PASS	AB=0.955;AC=26;AF=0.481;AN=54;BaseQRankSum=0.485;DP=311;FS=1.552;HRun=0;HaplotypeScore=61.6239;InbreedingCoeff=-0.0039;MQ=35.50;MQ0=15;MQRankSum=-2.604;QD=5.40;ReadPosRankSum=1.806;VQSLOD=1.9566;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:6,0:6:10.54:31,0,11	0/1:7,0:4:1.42:1,0,16	0/0:29,0:5:8.95:0,9,84	0/0:37,0:9:16.59:0,17,225	0/0:8,0:7:6.25:0,6,32	1/1:7,1:7:5.98:52,6,0	1/1:1,2:2:5.69:46,6,0	1/1:9,6:12:31.79:288,32,0	1/1:7,0:7:6.40:61,6,0	0/1:5,2:6:2.41:106,0,2	0/1:9,0:7:14.42:14,0,26	0/1:16,1:14:36.08:36,0,109	0/1:12,0:10:26.73:31,0,27	0/1:12,0:10:22.71:96,0,23	0/0:9,0:9:21.07:0,21,462	0/1:10,0:7:18.48:18,0,67	0/1:6,0:5:0.59:1,0,12	0/0:6,0:6:5.91:0,6,57	0/1:12,7:13:1.19:253,0,1	1/1:10,0:7:2.51:7,3,0	./.	0/1:10,0:9:7.02:7,0,15	1/1:4,2:5:5.55:37,6,0	0/1:11,0:11:21.56:22,0,23	0/1:11,0:10:0.42:61,0,0	0/1:10,1:9:51.14:51,0,69	0/0:11,0:10:3.65:0,4,37	0/0:8,0:7:10.85:0,11,59
chr10	21157702	.	T	TTCC	2229.61	PASS	AB=0.827;AC=31;AF=0.574;AN=54;BaseQRankSum=-2.209;DP=303;FS=1.589;HRun=0;HaplotypeScore=58.9717;InbreedingCoeff=0.2694;MQ=32.96;MQ0=19;MQRankSum=-2.684;QD=12.74;ReadPosRankSum=3.281;VQSLOD=3.1845;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,1:4:2.16:42,2,0	1/1:4,3:4:4.81:24,5,0	0/0:32,0:5:8.95:0,9,83	0/0:44,0:10:16.27:0,16,188	0/0:7,1:7:6.25:0,6,33	1/1:7,0:6:5.99:75,6,0	1/1:3,0:2:5.69:63,6,0	1/1:16,0:12:32.37:390,32,0	1/1:5,1:6:8.90:82,9,0	0/1:3,3:5:2.38:259,0,2	0/1:7,1:6:14.42:14,0,26	0/1:13,4:14:64.75:65,0,105	1/1:6,4:8:6.49:97,6,0	1/1:8,4:10:12.34:195,12,0	0/0:9,0:9:21.07:0,21,358	0/1:7,2:6:53.40:53,0,67	0/1:4,1:4:10.99:18,0,11	0/0:6,0:6:5.91:0,6,58	1/1:17,2:13:22.33:568,22,0	1/1:7,3:7:3.48:58,3,0	./.	0/0:7,2:8:4.83:0,5,27	1/1:3,1:3:5.61:61,6,0	0/1:11,0:11:22.67:57,0,23	1/1:8,3:10:11.79:134,12,0	0/1:7,3:8:11.10:144,0,11	0/0:9,1:9:0.43:0,0,1	0/0:6,0:5:10.85:0,11,59
chr10	21158008	.	A	AT	22376.74	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-5.678;DP=624;FS=1.964;HRun=0;HaplotypeScore=71.5100;InbreedingCoeff=0.9973;MQ=94.66;MQ0=0;MQRankSum=-8.592;QD=42.06;ReadPosRankSum=4.719;VQSLOD=5.4226;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,39:39:99:1676,105,0	1/1:0,11:11:30.10:468,30,0	0/0:31,0:31:78.11:0,78,1092	0/0:27,0:27:68.09:0,68,901	1/1:0,19:19:48.08:735,48,0	1/1:0,19:19:42.14:671,42,0	1/1:0,17:17:48.16:767,48,0	1/1:0,33:33:96.18:1360,96,0	1/1:1,24:25:69.24:1100,69,0	1/1:0,12:12:33.11:518,33,0	1/1:0,11:11:27.09:431,27,0	1/1:2,24:26:66.22:1052,66,0	1/1:0,20:21:54.12:824,54,0	1/1:0,26:26:66.23:1054,66,0	0/0:34,0:33:96.29:0,96,1320	1/1:0,21:21:60.14:928,60,0	1/1:1,27:28:75.26:1198,75,0	1/1:0,24:24:63.21:1007,63,0	1/1:1,22:23:63.21:1002,63,0	1/1:0,8:8:21.07:335,21,0	1/1:1,48:49:99:2109,132,0	1/1:0,17:17:42.14:669,42,0	1/1:0,10:10:27.08:428,27,0	1/1:0,34:33:96.33:1533,96,0	1/1:0,16:16:42.14:670,42,0	1/1:0,14:14:42.12:645,42,0	1/1:0,18:18:45.15:718,45,0	1/1:1,10:11:30.10:479,30,0
chr10	21158783	.	TA	T	8379.67	PASS	AB=0.548;AC=37;AF=0.661;AN=56;BaseQRankSum=2.193;DP=529;FS=0.359;HRun=9;HaplotypeScore=78.2247;InbreedingCoeff=0.9331;MQ=74.82;MQ0=1;MQRankSum=-5.537;QD=24.57;ReadPosRankSum=2.373;VQSLOD=5.4878;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,14:18:42.10:407,42,0	0/0:12,0:12:36.11:0,36,415	0/0:26,0:21:22.87:0,23,262	0/0:19,0:12:6.74:0,7,57	0/0:26,0:26:78.19:0,78,878	1/1:3,19:22:65.97:590,66,0	1/1:1,16:17:48.03:439,48,0	1/1:11,17:28:81.03:737,81,0	1/1:2,15:17:48.02:439,48,0	0/0:16,0:16:48.14:0,48,554	0/0:16,0:16:45.10:0,45,497	1/1:4,14:18:51.03:466,51,0	1/1:4,15:19:45.02:412,45,0	1/1:2,16:18:51.03:466,51,0	0/0:20,1:21:35.71:0,36,655	1/1:1,18:19:54.03:494,54,0	0/0:29,0:29:77.86:0,78,873	1/1:3,9:12:27.01:247,27,0	0/0:21,1:22:32.66:0,33,595	1/1:5,16:21:60.01:542,60,0	1/1:2,3:5:12:110,12,0	1/1:2,13:15:42.02:384,42,0	1/1:4,12:16:42.01:380,42,0	1/1:4,4:8:12:110,12,0	1/1:4,26:30:87.05:795,87,0	0/1:4,19:23:0.46:492,0,0	1/1:4,16:20:51.03:466,51,0	1/1:1,14:15:44.98:404,45,0
chr10	21158838	.	A	AT	14547.41	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-4.668;DP=570;FS=7.952;HRun=8;HaplotypeScore=68.7886;InbreedingCoeff=0.9518;MQ=74.86;MQ0=0;MQRankSum=-5.838;QD=28.19;ReadPosRankSum=2.330;VQSLOD=5.2812;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,25:29:69.14:761,69,0	1/1:1,12:13:27.04:297,27,0	0/0:12,0:12:30.01:0,30,271	0/0:16,0:16:17.09:0,17,235	1/1:2,25:27:47.71:788,48,0	1/1:2,23:25:69.04:739,69,0	1/1:1,16:17:45.13:519,45,0	1/1:7,34:41:99:1142,99,0	1/1:3,13:16:36.11:415,36,0	1/1:4,21:26:65.68:728,66,0	1/1:3,17:21:56.93:621,57,0	1/1:3,10:13:5.63:317,6,0	1/1:3,18:21:48.14:554,48,0	1/1:1,17:18:51.15:588,51,0	0/0:26,0:26:72:0,72,650	1/1:3,17:20:51.15:588,51,0	1/1:3,24:27:69.21:796,69,0	1/1:2,10:12:30.09:346,30,0	1/1:2,20:22:60.18:692,60,0	1/1:7,16:23:20.53:439,21,0	1/1:1,6:7:18.05:208,18,0	1/1:1,15:16:45:464,45,0	1/1:3,15:18:42.04:455,42,0	1/1:2,8:10:24.07:277,24,0	1/1:6,26:32:62.84:948,63,0	1/1:2,16:18:48.14:554,48,0	1/1:6,26:31:59.79:929,60,0	1/1:1,11:12:33.10:381,33,0
chr10	21160077	.	CTTTTT	C	1482.76	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=5.869;DP=487;FS=4.111;HRun=17;HaplotypeScore=95.7524;InbreedingCoeff=0.9273;MQ=77.25;MQ0=0;MQRankSum=-2.904;QD=20.88;ReadPosRankSum=6.205;VQSLOD=1.0830;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:34:71.25:0,71,1503	1/1:0,3:3:2.92:45,3,0	0/0:21,0:16:27.09:0,27,509	0/0:24,0:16:18.79:0,19,272	1/1:2,12:14:26.85:406,27,0	0/0:9,0:9:27.09:0,27,653	0/0:27,0:29:69.22:0,69,1468	0/0:9,0:26:49.78:0,50,329	0/0:18,0:21:45.13:0,45,935	1/1:6,8:14:23.82:357,24,0	1/1:1,5:7:11.92:165,12,0	0/0:11,0:17:33.10:0,33,679	0/0:19,0:20:51.17:0,51,1132	0/0:13,0:16:45.15:0,45,983	0/0:15,0:20:51.17:0,51,1022	0/0:20,0:19:57.17:0,57,1315	1/1:6,19:25:32.77:497,33,0	0/0:11,0:10:33.11:0,33,740	1/1:3,4:8:14.36:189,14,0	0/0:11,0:11:18.06:0,18,440	0/0:14,0:17:42.13:0,42,820	0/0:8,0:12:30.09:0,30,547	0/0:3,0:3:6.02:0,6,96	0/0:21,0:24:57.20:0,57,1397	0/0:18,0:20:42.14:0,42,894	0/0:25,0:28:66.20:0,66,1462	0/0:21,0:22:54.18:0,54,1187	0/0:10,0:10:27.09:0,27,667
chr10	21161522	.	C	CA	1718.22	PASS	AB=0.959;AC=36;AF=0.692;AN=52;BaseQRankSum=-2.707;DP=348;FS=15.738;HRun=0;HaplotypeScore=74.3812;InbreedingCoeff=0.2368;MQ=85.18;MQ0=1;MQRankSum=-2.330;QD=6.29;ReadPosRankSum=-0.735;VQSLOD=1.9778;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:24:20.10:167,20,0	./.	0/0:19,0:14:13.99:0,14,225	0/0:18,0:15:24.79:0,25,185	1/1:5,1:6:2.86:21,3,0	1/1:7,3:11:2.55:70,3,0	1/1:24,13:37:38.04:407,38,0	1/1:20,0:20:31.09:236,31,0	1/1:8,2:10:7.04:122,7,0	1/1:4,0:4:2.97:21,3,0	./.	1/1:7,5:12:2.28:72,2,0	1/1:8,9:17:3.82:27,4,0	0/1:12,1:13:12.31:70,0,12	0/0:8,0:8:17.96:0,18,170	1/1:11,3:14:6.61:70,7,0	0/1:16,0:16:47.56:98,0,48	0/0:4,10:14:1.72:0,2,4	0/1:12,0:12:14.88:131,0,15	1/1:5,8:13:2.99:38,3,0	0/1:14,1:15:14.51:16,0,15	1/1:13,0:13:7.85:68,8,0	0/1:7,0:8:12.17:72,0,12	1/1:11,0:11:14.89:116,15,0	0/0:5,7:12:0.47:0,0,1	1/1:8,0:8:5.90:43,6,0	1/1:6,0:6:0.84:2,1,0	0/1:3,0:3:0:0,0,0
chr10	21162189	.	C	CT	2478.84	PASS	AB=0.880;AC=15;AF=0.268;AN=56;BaseQRankSum=-1.128;DP=480;FS=0.924;HRun=11;HaplotypeScore=74.6252;InbreedingCoeff=0.7828;MQ=73.14;MQ0=1;MQRankSum=-4.916;QD=14.50;ReadPosRankSum=-2.521;VQSLOD=3.4247;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:38.84:0,39,302	1/1:2,4:6:12.02:122,12,0	0/1:11,0:9:11.27:11,0,17	0/1:16,1:13:1.95:8,0,2	1/1:10,14:24:42.07:420,42,0	0/0:19,0:19:44.18:0,44,345	0/0:19,0:19:23.88:0,24,185	1/1:21,19:41:74.21:745,74,0	0/0:13,0:13:20.82:0,21,157	1/1:8,11:19:33.03:324,33,0	1/1:5,12:17:39.08:394,39,0	0/0:21,0:21:41.78:0,42,323	0/0:18,0:18:44.43:0,44,334	0/0:19,0:19:41.78:0,42,319	0/0:10,0:11:28.91:0,29,213	0/0:12,0:13:22.92:0,23,166	1/1:11,6:17:18.41:338,18,0	0/0:15,0:15:22.14:0,22,275	0/1:10,8:18:4.06:308,0,4	0/0:23,0:23:47.78:0,48,369	0/0:6,0:6:14.94:0,15,116	0/0:20,0:20:38.82:0,39,299	0/0:21,0:21:41.60:0,42,309	0/0:8,0:8:8.93:0,9,70	0/0:15,0:15:32.85:0,33,254	0/0:17,0:17:44.82:0,45,347	0/0:25,0:25:51.98:0,52,392	0/0:7,0:7:17.92:0,18,139
chr10	21162212	.	GA	G	6284.25	PASS	AB=0.661;AC=46;AF=0.821;AN=56;BaseQRankSum=-3.032;DP=492;FS=1.087;HRun=12;HaplotypeScore=67.7897;InbreedingCoeff=0.4833;MQ=76.72;MQ0=2;MQRankSum=0.768;QD=15.03;ReadPosRankSum=4.675;VQSLOD=5.6324;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:3,11:14:0.56:179,0,1	0/1:2,9:11:0.56:177,0,1	0/0:23,0:17:14.82:0,15,133	0/1:19,0:14:28.59:32,0,29	1/1:7,15:24:30.17:377,30,0	1/1:5,17:22:4.97:323,5,0	1/1:1,15:16:32.87:255,33,0	0/0:12,0:35:86.14:0,86,489	1/1:0,11:11:26.81:202,27,0	1/1:7,7:14:23.88:183,24,0	1/1:4,15:19:52.61:396,53,0	1/1:5,13:18:35.84:279,36,0	1/1:4,15:19:41.82:325,42,0	1/1:5,13:18:9.03:203,9,0	0/0:14,1:15:15.84:0,16,342	1/1:0,11:12:28.93:215,29,0	1/1:5,13:18:35.81:274,36,0	1/1:0,14:15:37.90:285,38,0	1/1:4,18:22:59.29:475,59,0	1/1:2,18:20:47.66:363,48,0	0/1:2,5:7:12.51:98,0,13	1/1:3,14:17:23.85:186,24,0	1/1:4,10:14:2.41:202,2,0	1/1:2,7:10:16.98:122,17,0	1/1:3,16:19:8.41:248,8,0	1/1:5,10:15:2.44:202,2,0	1/1:2,31:34:64.79:493,65,0	1/1:0,8:9:25.95:192,26,0
chr10	21162521	.	A	AT	768.48	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-8.199;DP=629;FS=5.677;HRun=10;HaplotypeScore=64.7276;InbreedingCoeff=0.9931;MQ=70.02;MQ0=0;MQRankSum=-0.838;QD=21.35;ReadPosRankSum=-3.503;VQSLOD=3.2825;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:22,1:24:33.56:0,34,484	0/0:14,0:15:40.99:0,41,326	0/0:13,0:13:29.41:0,29,223	0/0:9,0:9:20.07:0,20,164	0/0:24,0:25:46.91:0,47,375	0/0:22,0:22:61.96:0,62,499	0/0:25,0:25:53.88:0,54,443	1/1:8,28:36:62.56:863,63,0	0/0:18,0:18:50.91:0,51,414	0/0:26,0:26:50.89:0,51,415	0/0:18,0:18:38.93:0,39,320	0/0:23,0:24:70.96:0,71,572	0/0:27,0:27:71.83:0,72,578	0/0:26,1:27:36.92:0,37,510	0/0:23,0:23:59.86:0,60,485	0/0:32,0:32:86.85:0,87,709	0/0:17,0:17:32.92:0,33,271	0/0:30,0:30:87.37:0,87,715	0/0:22,0:23:52.93:0,53,421	0/0:27,0:28:71.87:0,72,585	0/0:14,0:15:43.99:0,44,351	0/0:21,0:21:56.92:0,57,468	0/0:18,0:19:31.97:0,32,252	0/0:13,0:13:32.93:0,33,271	0/0:28,0:28:67.92:0,68,543	0/0:24,0:24:59.89:0,60,490	0/0:26,0:26:68.88:0,69,564	0/0:19,0:20:52.96:0,53,425
chr10	21163420	.	A	AT	581.96	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-3.398;DP=710;FS=0.771;HRun=8;HaplotypeScore=124.1947;InbreedingCoeff=0.9969;MQ=73.69;MQ0=1;MQRankSum=-1.784;QD=17.12;ReadPosRankSum=-4.187;VQSLOD=1.8517;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,99,901	0/0:13,0:13:35.99:0,36,324	0/0:27,0:23:27.89:0,28,303	0/0:23,0:18:24.83:0,25,257	0/0:21,0:21:54.03:0,54,494	0/0:33,0:33:84.04:0,84,769	0/0:23,0:23:57.03:0,57,522	1/1:16,18:34:63.56:677,64,0	0/0:24,0:24:63.03:0,63,577	0/0:30,0:30:66.01:0,66,601	0/0:27,0:26:69.03:0,69,631	0/0:23,0:23:59.96:0,60,539	0/0:27,0:27:75.03:0,75,682	0/0:21,0:21:48:0,48,435	0/0:23,0:24:65.06:0,65,582	0/0:16,0:16:45.02:0,45,412	0/0:25,0:25:65.98:0,66,591	0/0:25,0:25:60.02:0,60,549	0/0:18,0:18:42.02:0,42,384	0/0:32,0:32:87.04:0,87,796	0/0:13,0:13:33:0,33,297	0/0:33,0:33:87.04:0,87,796	0/0:34,0:34:55.44:0,55,762	0/0:16,0:16:36.02:0,36,329	0/0:29,0:29:72.03:0,72,659	0/0:31,0:31:90.05:0,90,824	0/0:30,0:30:81:0,81,734	0/0:21,0:21:63.03:0,63,576
chr10	21163431	.	GT	G	14753.79	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-2.153;DP=713;FS=1.033;HRun=8;HaplotypeScore=84.9120;InbreedingCoeff=0.9947;MQ=76.82;MQ0=3;MQRankSum=-2.701;QD=23.83;ReadPosRankSum=4.492;VQSLOD=5.2887;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,36:40:95.11:950,95,0	1/1:1,12:13:36.06:348,36,0	0/0:39,1:30:19.28:0,19,463	0/0:30,1:25:20.65:0,21,423	1/1:2,18:20:54.08:521,54,0	1/1:5,28:33:72.11:695,72,0	1/1:2,21:23:57.09:550,57,0	1/1:16,12:28:25.77:433,26,0	1/1:0,22:22:63.10:608,63,0	1/1:3,23:26:69.11:666,69,0	1/1:2,24:26:69.10:666,69,0	1/1:3,19:22:30.22:495,30,0	1/1:2,23:25:63:608,63,0	1/1:1,20:22:56.12:527,56,0	0/0:23,0:23:69.21:0,69,834	1/1:2,16:18:48.08:464,48,0	1/1:0,23:23:66.11:637,66,0	1/1:5,19:24:46.45:485,46,0	1/1:4,15:19:45.01:415,45,0	1/1:3,25:29:74.14:701,74,0	1/1:2,9:11:24.04:232,24,0	1/1:5,26:31:66.09:637,66,0	1/1:3,31:34:90.14:869,90,0	1/1:1,14:15:36.06:348,36,0	1/1:3,27:30:75.12:724,75,0	1/1:3,29:32:83.82:781,84,0	1/1:4,28:32:81.13:782,81,0	1/1:0,21:21:63.10:608,63,0
chr10	21164570	.	TACAC	T	7990.35	PASS	AB=0.529;AC=11;AF=0.196;AN=56;BaseQRankSum=15.279;DP=916;FS=0.000;HRun=0;HaplotypeScore=177.4707;InbreedingCoeff=0.8985;MQ=67.54;MQ0=0;MQRankSum=-1.625;QD=45.14;ReadPosRankSum=3.404;VQSLOD=5.1196;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:37:87.20:0,87,2323	1/1:1,18:19:35.47:690,35,0	0/0:26,0:26:64.20:0,64,1302	0/0:20,0:19:37.12:0,37,698	1/1:0,29:29:43.97:871,44,0	0/0:31,0:31:90.21:0,90,2140	0/0:19,0:19:42.57:0,43,966	0/0:31,0:31:89.74:0,90,1805	0/0:33,0:33:99:0,99,2574	1/1:0,49:49:99:2740,147,0	1/1:0,38:38:96.33:1884,96,0	0/0:38,0:38:99:0,114,2831	0/0:35,0:35:99:0,105,2546	0/0:39,0:39:99:0,117,3077	0/0:42,0:42:99:0,123,3054	0/0:32,0:32:96.30:0,96,2492	0/1:2,16:18:9.37:563,0,9	0/0:41,0:41:99:0,112,2832	1/1:1,23:24:69.20:1242,69,0	0/0:42,0:42:99:0,126,3101	0/0:47,0:47:99:0,141,3461	0/0:41,0:41:99:0,114,2962	0/0:37,0:37:99:0,111,2876	0/0:22,0:22:47.94:0,48,1201	0/0:27,0:27:78.20:0,78,1806	0/0:46,2:48:21.66:0,22,3226	0/0:36,0:36:99:0,105,2707	0/0:15,0:15:45.09:0,45,948
chr10	21164998	.	CT	C	9221.33	PASS	AB=0.950;AC=37;AF=0.661;AN=56;BaseQRankSum=13.251;DP=687;FS=8.774;HRun=10;HaplotypeScore=72.3857;InbreedingCoeff=0.9373;MQ=73.93;MQ0=1;MQRankSum=-0.934;QD=20.54;ReadPosRankSum=4.301;VQSLOD=5.5370;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,17:26:50.92:436,51,0	0/0:17,0:17:45.12:0,45,498	0/1:18,1:17:5.71:6,0,255	0/0:23,0:23:33.03:0,33,334	0/0:28,0:29:75.49:0,75,802	1/1:2,17:19:44.99:391,45,0	1/1:0,17:17:47.99:417,48,0	0/0:36,0:36:78.18:0,78,842	1/1:1,17:18:41.99:365,42,0	0/0:40,0:40:96.25:0,96,1056	0/0:31,0:31:65.97:0,66,844	1/1:4,16:20:41.96:360,42,0	1/1:1,22:23:62.98:547,63,0	1/1:4,23:27:62.98:547,63,0	0/0:19,0:19:51.13:0,51,557	1/1:1,22:23:65.98:573,66,0	0/0:17,0:17:39.11:0,39,431	1/1:2,16:18:41.99:365,42,0	0/0:25,0:26:65.99:0,66,697	1/1:3,29:32:83.97:729,84,0	1/1:2,10:12:26.99:234,27,0	1/1:0,20:21:56.02:475,56,0	1/1:0,31:31:86.93:747,87,0	1/1:2,18:20:50.98:443,51,0	1/1:4,31:35:89.97:781,90,0	1/1:6,25:31:44.74:608,45,0	1/1:4,26:30:74.98:651,75,0	1/1:5,22:27:62.98:547,63,0
chr10	21166758	.	A	AGTGT	18528.15	PASS	AB=0.731;AC=46;AF=0.821;AN=56;BaseQRankSum=-5.553;DP=1024;FS=4.839;HRun=0;HaplotypeScore=218.4716;InbreedingCoeff=0.4899;MQ=60.37;MQ0=14;MQRankSum=1.814;QD=21.77;ReadPosRankSum=1.862;VQSLOD=4.3154;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:20,32:61:53.50:1207,53,0	1/1:4,0:8:13.85:65,14,0	0/0:48,0:18:20.81:0,21,275	0/0:75,0:35:5.36:0,5,392	1/1:8,0:23:19.78:152,20,0	1/1:6,23:30:42.14:1035,42,0	1/1:15,21:38:32.57:690,33,0	1/1:41,1:43:67.26:808,67,0	1/1:11,28:43:59.92:1386,60,0	0/1:26,0:47:99:316,0,198	1/1:6,0:15:8.02:37,8,0	0/1:16,30:49:0.60:1420,0,1	1/1:8,22:33:58.18:1294,58,0	1/1:5,23:33:47.90:1120,48,0	0/0:47,0:48:84.22:0,84,1318	1/1:17,30:52:44.89:1011,45,0	0/1:20,0:32:99:143,0,142	1/1:8,19:28:32.80:697,33,0	0/1:20,0:20:31.30:61,0,31	1/1:4,18:27:20.54:394,21,0	1/1:22,49:78:32.86:1639,33,0	1/1:6,20:27:18.06:444,18,0	1/1:3,15:18:12.04:296,12,0	1/1:10,24:37:47.57:1059,48,0	1/1:5,19:25:22.86:522,23,0	1/1:10,17:30:53.37:1055,53,0	1/1:7,26:35:56.75:1282,57,0	1/1:2,8:12:20.54:394,21,0
chr10	21166798	.	A	AGT	3637.75	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=-1.385;DP=1011;FS=22.833;HRun=0;HaplotypeScore=288.8988;InbreedingCoeff=0.7161;MQ=48.17;MQ0=22;MQRankSum=-3.549;QD=14.38;ReadPosRankSum=0.325;VQSLOD=2.1053;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:78.19:0,78,984	1/1:2,5:7:9.03:142,9,0	0/0:62,1:14:28.92:0,29,361	0/0:80,0:27:30.43:0,30,466	1/1:13,12:25:24.06:336,24,0	0/0:26,0:26:51.15:0,51,653	0/0:36,0:35:66.19:0,66,844	0/1:49,0:43:5.63:6,0,1018	0/0:43,0:43:41.16:0,41,946	1/1:10,31:40:99:1626,102,0	1/1:3,14:17:5.99:98,6,0	0/1:44,0:43:8.35:8,0,598	0/0:37,0:37:29.39:0,29,748	0/0:32,0:32:42.12:0,42,537	0/0:45,0:45:78.22:0,78,989	0/0:46,0:46:54.17:0,54,708	1/1:10,24:34:69.49:1094,69,0	0/0:26,0:26:47.82:0,48,563	1/1:8,5:12:21.02:312,21,0	0/0:32,0:32:60.19:0,60,785	0/0:70,0:68:99:0,111,1358	0/0:29,0:29:11.58:0,12,249	0/0:23,0:23:26.72:0,27,325	0/0:44,0:44:37.52:0,38,904	0/0:34,0:34:50.81:0,51,656	0/1:23,0:22:17.05:17,0,612	0/0:32,0:32:67.87:0,68,849	0/0:11,0:11:26.57:0,27,318
chr10	21166799	.	G	GTA	1714.68	PASS	AB=0.966;AC=12;AF=0.214;AN=56;BaseQRankSum=5.300;DP=1020;FS=13.583;HRun=0;HaplotypeScore=295.1617;InbreedingCoeff=0.3001;MQ=48.21;MQ0=22;MQRankSum=-2.624;QD=6.62;ReadPosRankSum=2.709;VQSLOD=2.0281;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:84.25:0,84,1232	0/1:7,0:7:6.96:85,0,7	0/0:62,0:14:27.07:0,27,465	0/0:81,0:27:36.27:0,36,564	1/1:24,2:26:20.16:187,20,0	0/0:25,0:25:51.17:0,51,778	0/0:34,2:35:72.21:0,72,1056	0/1:49,3:46:41.46:41,0,1435	0/0:43,1:44:33.23:0,33,1163	1/1:42,0:41:2.37:752,2,0	0/1:17,0:17:15.01:40,0,15	0/1:42,2:43:15.85:16,0,897	0/0:35,1:36:17.48:0,17,916	0/0:33,0:33:44.83:0,45,658	0/0:46,0:46:84.25:0,84,1235	0/0:46,0:46:60.17:0,60,873	1/1:32,0:34:5.07:539,5,0	0/0:26,0:26:53.91:0,54,734	0/1:13,1:12:46.38:189,0,46	0/0:31,1:32:62.94:0,63,940	0/0:69,0:67:99:0,126,1769	0/0:28,2:30:14.60:0,15,332	0/0:22,2:24:29.74:0,30,428	0/0:44,1:45:32.56:0,33,1136	0/0:33,1:34:50.57:0,51,779	0/1:22,1:22:21.96:22,0,785	0/0:32,0:32:78.04:0,78,1096	0/0:12,0:12:30.08:0,30,422
chr10	21167796	.	T	TA	6465.19	PASS	AB=0.929;AC=53;AF=0.946;AN=56;BaseQRankSum=-1.457;DP=695;FS=5.035;HRun=1;HaplotypeScore=177.5797;InbreedingCoeff=0.5039;MQ=71.69;MQ0=0;MQRankSum=-3.935;QD=9.54;ReadPosRankSum=2.498;VQSLOD=2.8176;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:35,0:35:63.57:311,64,0	1/1:10,0:10:18.17:88,18,0	0/1:24,2:26:39.58:40,0,422	0/0:16,1:17:4.49:0,4,252	1/1:23,0:23:23.96:108,24,0	1/1:25,1:26:29.84:168,30,0	1/1:21,0:21:42.12:225,42,0	1/1:29,0:29:73.39:437,73,0	1/1:18,0:18:28.03:144,28,0	1/1:20,1:21:49.87:359,50,0	1/1:20,0:20:18.82:105,19,0	1/1:29,0:29:49.04:239,49,0	1/1:31,1:32:65.55:391,66,0	1/1:27,0:27:52.91:281,53,0	1/1:35,1:36:47.92:298,48,0	1/1:38,0:38:73.04:402,73,0	1/1:13,0:13:17.65:69,18,0	1/1:19,0:19:45.15:202,45,0	1/1:16,0:16:33.64:161,34,0	1/1:29,2:31:65.79:302,66,0	1/1:28,0:28:65.45:315,65,0	1/1:37,0:37:65.47:318,65,0	1/1:30,0:30:48.80:218,49,0	1/1:20,0:20:39.67:215,40,0	1/1:28,0:28:57.94:334,58,0	1/1:25,0:25:67.07:356,67,0	1/1:28,0:27:43.10:242,43,0	1/1:12,0:12:29.65:137,30,0
chr10	21168902	.	GATATAT	G	4549.56	PASS	AB=1.000;AC=17;AF=0.567;AN=30;BaseQRankSum=-1.093;DP=222;FS=0.000;HRun=0;HaplotypeScore=62.5427;InbreedingCoeff=0.6368;MQ=68.39;MQ0=0;MQRankSum=-2.725;QD=27.91;ReadPosRankSum=1.032;VQSLOD=4.1575;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	1/1:2,8:10:15.05:312,15,0	0/0:4,0:4:0.89:0,1,2	0/1:8,0:5:3.06:3,0,20	1/1:1,23:24:51.13:1033,51,0	./.	0/0:4,0:4:3.01:0,3,92	1/1:10,16:26:51.10:763,51,0	0/0:2,0:2:0.47:0,0,1	1/1:5,13:18:36.08:613,36,0	1/1:2,19:21:39.13:836,39,0	0/0:4,0:4:6:0,6,116	./.	0/0:4,0:4:3:0,3,25	0/0:8,0:10:18.05:0,18,407	./.	1/1:10,18:29:21.07:431,21,0	1/1:11,0:11:0.45:1,0,0	1/1:4,12:16:30.08:557,30,0	./.	./.	./.	./.	./.	./.	./.	./.	./.
chr10	21169342	.	CCTCTCTCT	C	734.78	PASS	AB=0.965;AC=19;AF=0.413;AN=46;BaseQRankSum=-1.284;DP=548;FS=7.243;HRun=0;HaplotypeScore=163.5362;InbreedingCoeff=-0.1482;MQ=67.25;MQ0=22;MQRankSum=0.450;QD=2.35;ReadPosRankSum=0.934;VQSLOD=1.9693;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:19:11.72:144,12,0	./.	./.	0/0:35,0:21:0:0,0,0	0/1:19,0:19:12.57:68,0,13	0/0:14,0:14:3.01:0,3,49	0/0:30,0:30:5.41:0,5,26	0/0:23,0:23:1.25:0,1,3	0/0:15,0:15:9.03:0,9,164	0/1:20,0:22:1.21:1,0,21	0/1:20,0:20:15.99:16,0,20	0/0:20,0:18:11.99:0,12,143	0/1:18,0:18:12.98:13,0,132	0/0:14,0:14:3.46:0,3,24	1/1:20,0:19:15.01:220,15,0	0/1:21,0:21:48.52:49,0,121	0/1:10,5:13:56.04:56,0,81	0/1:10,0:9:8.94:34,0,9	1/1:19,0:20:2.05:38,2,0	./.	0/1:40,0:38:38.56:71,0,39	./.	0/1:22,0:22:37.91:38,0,96	0/1:26,0:26:41.74:42,0,119	1/1:14,0:13:1.25:18,1,0	0/0:19,0:19:7.51:0,8,39	0/1:24,0:24:64.34:64,0,98	./.
chr10	21171753	.	ATG	A	10993.49	PASS	AB=0.723;AC=38;AF=0.679;AN=56;BaseQRankSum=5.372;DP=822;FS=8.066;HRun=0;HaplotypeScore=122.0981;InbreedingCoeff=0.8003;MQ=59.87;MQ0=10;MQRankSum=1.092;QD=19.25;ReadPosRankSum=3.507;VQSLOD=4.5370;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,35:51:42.01:961,42,0	0/0:9,0:9:18.06:0,18,278	0/0:51,0:25:15.07:0,15,212	0/0:68,0:37:56.92:0,57,694	0/0:24,0:25:45.14:0,45,695	1/1:14,17:31:48.15:573,48,0	1/1:5,20:26:47.77:531,48,0	1/1:21,18:31:10.21:417,10,0	1/1:12,17:29:41.80:503,42,0	0/0:19,0:20:33.61:0,34,667	0/1:12,2:14:17.91:18,0,217	1/1:5,26:34:68.75:783,69,0	1/1:10,19:30:60.02:696,60,0	1/1:8,9:17:23.96:284,24,0	0/0:26,1:27:25.10:0,25,842	1/1:3,15:19:41.91:464,42,0	0/0:25,1:26:1.70:0,2,469	1/1:8,15:25:30.40:493,30,0	0/0:24,0:24:39.06:0,39,541	1/1:7,12:19:33.57:402,34,0	1/1:18,39:57:84.12:996,84,0	0/1:7,21:28:8.36:489,0,8	1/1:4,13:17:29.96:359,30,0	1/1:12,30:42:72.22:861,72,0	1/1:9,7:16:27.07:312,27,0	1/1:9,19:27:59.62:625,60,0	1/1:9,26:33:72.22:863,72,0	1/1:3,10:13:33.01:363,33,0
chr10	21171773	.	GTA	G	2839.97	PASS	AB=0.993;AC=24;AF=0.429;AN=56;BaseQRankSum=5.068;DP=826;FS=7.814;HRun=0;HaplotypeScore=168.4381;InbreedingCoeff=-0.0760;MQ=50.28;MQ0=18;MQRankSum=4.709;QD=5.32;ReadPosRankSum=10.557;VQSLOD=0.7429;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:48,1:49:74.21:285,0,74	0/0:9,0:9:21:0,21,345	0/0:68,0:17:41.34:0,41,465	0/0:87,0:27:68.22:0,68,852	0/0:27,0:27:58.89:0,59,1033	1/1:25,1:25:24.53:217,25,0	0/1:28,0:28:99:107,0,109	0/1:37,0:27:86.08:86,0,213	0/1:21,1:22:23.96:118,0,24	0/0:20,0:20:53.95:0,54,943	0/0:14,0:14:6.71:0,7,251	0/1:36,0:36:15.29:197,0,15	0/1:30,0:31:78.40:235,0,78	0/1:17,0:17:20.66:68,0,21	0/0:27,0:27:68.67:0,69,1267	0/1:19,0:19:18.70:100,0,19	0/0:19,0:20:13.66:0,14,597	0/1:23,0:23:29.55:136,0,30	0/0:19,0:19:53.26:0,53,784	0/1:17,0:17:47.44:98,0,47	1/1:48,1:50:31.86:337,32,0	0/1:28,0:28:81.05:138,0,81	1/1:18,0:18:13.16:103,13,0	1/1:35,1:36:4.69:247,5,0	0/1:19,0:19:41.61:96,0,42	0/1:30,0:28:67.36:142,0,67	1/1:33,0:31:3.66:232,4,0	0/1:15,0:15:11.97:78,0,12
chr10	21171778	.	TGTGCGTGC	T	1203.99	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=0.407;DP=845;FS=3.847;HRun=0;HaplotypeScore=257.4249;InbreedingCoeff=0.9557;MQ=49.96;MQ0=18;MQRankSum=-7.713;QD=33.44;ReadPosRankSum=-4.241;VQSLOD=2.6765;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:96.24:0,96,3429	0/0:9,0:9:21.03:0,21,704	0/0:72,0:17:35.75:0,36,1057	0/0:94,0:28:48.19:0,48,1798	0/0:27,0:27:63.05:0,63,2432	0/0:26,0:25:54.19:0,54,2147	0/0:29,0:29:75.26:0,75,3083	1/1:9,27:26:65.93:1299,66,0	0/0:22,0:22:51.18:0,51,2017	0/0:19,0:19:51.14:0,51,1872	0/0:13,0:13:15.05:0,15,605	0/0:36,0:36:81.10:0,81,2997	0/0:30,0:30:81.28:0,81,3247	0/0:17,0:17:32.31:0,32,1166	0/0:26,0:26:72.25:0,72,2965	0/0:21,0:21:60.15:0,60,2246	0/0:19,0:19:35.80:0,36,1362	0/0:26,0:25:60.95:0,61,2580	0/0:21,0:21:57.14:0,57,2071	0/0:17,0:17:41.79:0,42,1764	0/0:56,0:56:94.94:0,95,3820	0/0:26,0:26:56.50:0,56,2144	0/0:17,0:17:33.11:0,33,1456	0/0:39,0:39:84.25:0,84,3338	0/0:19,0:19:31.29:0,31,1147	0/0:29,0:27:75.25:0,75,2893	0/0:33,0:31:83.79:0,84,2701	0/0:15,0:15:12.92:0,13,1631
chr10	21171801	.	CGTGT	C	5976.62	PASS	AB=0.815;AC=34;AF=0.654;AN=52;BaseQRankSum=-2.813;DP=822;FS=3.696;HRun=0;HaplotypeScore=181.6840;InbreedingCoeff=0.5889;MQ=47.89;MQ0=43;MQRankSum=-1.203;QD=11.58;ReadPosRankSum=1.732;VQSLOD=4.4727;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:30,8:40:10.70:433,0,11	0/0:6,0:12:15.05:0,15,256	./.	./.	0/0:24,0:28:45.12:0,45,758	1/1:16,8:25:32.62:432,33,0	1/1:21,8:30:38.97:509,39,0	0/1:36,0:28:32.19:33,0,32	1/1:14,5:20:23.23:307,23,0	0/0:13,0:19:20.27:0,20,268	0/0:4,0:17:8.06:0,8,111	1/1:25,5:28:30.83:332,31,0	1/1:24,6:33:19.11:416,19,0	0/1:8,4:17:12.71:128,0,13	0/0:26,0:28:11.92:0,12,980	1/1:14,6:21:2.49:309,2,0	0/0:11,0:32:23.89:0,24,345	1/1:18,3:22:16:285,16,0	0/0:14,0:22:27.04:0,27,394	1/1:11,4:15:15.04:214,15,0	0/1:49,9:56:30.72:231,0,31	1/1:19,6:26:23.78:353,24,0	1/1:12,4:18:6.49:96,6,0	1/1:22,9:33:32.56:459,33,0	1/1:8,14:23:10.91:281,11,0	1/1:18,8:27:37.46:650,37,0	1/1:11,5:16:11.54:273,12,0	1/1:15,3:18:18.01:237,18,0
chr10	21172105	.	TTGTCTGTCTGTC	T	2206.93	PASS	AC=12;AF=0.222;AN=54;BaseQRankSum=7.928;DP=667;FS=4.857;HRun=0;HaplotypeScore=225.7481;InbreedingCoeff=0.9088;MQ=67.89;MQ0=3;MQRankSum=-4.411;QD=18.24;ReadPosRankSum=-1.178;VQSLOD=2.1860;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:81.28:0,81,4351	1/1:7,3:10:6.02:207,6,0	0/0:21,0:18:8.99:0,9,235	0/0:17,0:16:6.02:0,6,132	1/1:14,15:29:20.99:622,21,0	0/0:30,0:30:57.20:0,57,3004	0/0:29,0:31:57.20:0,57,2975	1/1:36,0:34:7.60:43,8,0	0/0:22,0:22:24.07:0,24,1249	1/1:9,8:17:24.08:821,24,0	1/1:2,3:5:9.03:310,9,0	0/0:22,0:22:36.11:0,36,1826	0/0:30,0:30:63.22:0,63,3489	0/0:19,0:20:33.11:0,33,1750	0/0:30,0:32:54.19:0,54,2670	0/0:24,0:26:48.16:0,48,2425	./.	0/0:16,0:16:36.12:0,36,1814	1/1:19,5:24:15.02:375,15,0	0/0:13,0:14:18.06:0,18,827	0/0:37,0:38:66.23:0,66,3404	0/0:21,0:21:42.14:0,42,2244	0/0:20,0:20:21.07:0,21,1191	0/0:17,0:18:30.10:0,30,1522	0/0:26,0:27:48.16:0,48,2670	0/0:25,0:25:54.18:0,54,2880	0/0:30,0:29:57.20:0,57,3231	0/0:26,0:26:54.19:0,54,2909
chr10	21174759	.	A	AGTCT	9549.39	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-5.635;DP=657;FS=9.326;HRun=0;HaplotypeScore=114.1695;InbreedingCoeff=0.9239;MQ=72.18;MQ0=4;MQRankSum=1.222;QD=23.35;ReadPosRankSum=1.301;VQSLOD=4.3361;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,25:30:24.01:540,24,0	0/0:10,0:10:27.05:0,27,378	0/0:48,0:35:61.97:0,62,596	0/0:19,0:13:10.58:0,11,149	0/0:23,0:23:47.99:0,48,534	1/1:17,7:24:45:811,45,0	1/1:19,0:18:32.96:316,33,0	0/0:46,0:46:83.97:0,84,738	1/1:24,0:24:32.99:402,33,0	0/0:23,0:23:57.07:0,57,738	0/0:12,0:12:20.80:0,21,236	1/1:8,10:19:3.01:75,3,0	1/1:14,4:18:44.97:750,45,0	1/1:20,6:26:59.96:874,60,0	0/0:36,0:36:90.06:0,90,1056	1/1:34,0:34:14.89:306,15,0	0/0:17,0:16:35.96:0,36,443	1/1:17,0:17:35.92:431,36,0	0/0:14,0:13:26.92:0,27,241	1/1:17,6:23:53.86:758,54,0	1/1:5,14:21:6.02:149,6,0	1/1:9,1:10:17.97:194,18,0	1/1:15,1:16:23.97:216,24,0	1/1:26,0:26:5.97:237,6,0	1/1:19,10:29:77.74:1197,78,0	1/1:4,15:22:54.01:834,54,0	1/1:16,12:28:51.79:1233,52,0	1/1:1,22:23:9.03:224,9,0
chr10	21174772	.	G	GTCTGTCTA	6314.42	PASS	AB=1.000;AC=28;AF=0.500;AN=56;BaseQRankSum=1.202;DP=690;FS=8.144;HRun=0;HaplotypeScore=185.0694;InbreedingCoeff=0.2567;MQ=61.58;MQ0=8;MQRankSum=0.514;QD=12.89;ReadPosRankSum=6.708;VQSLOD=2.4048;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:30:21.39:200,21,0	0/0:10,0:10:30.06:0,30,609	0/0:39,0:26:61.99:0,62,598	0/0:15,0:9:10.58:0,11,149	0/0:23,0:23:62.97:0,63,830	0/1:27,0:27:41.25:366,0,41	0/1:20,0:19:9.96:277,0,10	0/1:45,0:42:16.54:17,0,636	1/1:20,3:23:20.01:641,20,0	0/0:29,0:29:75.01:0,75,1177	0/0:15,0:15:32.77:0,33,434	0/1:20,0:20:7.51:8,0,126	0/1:20,0:20:21.95:359,0,22	0/1:28,0:28:6.66:445,0,7	0/0:36,0:36:93.05:0,93,1467	1/1:3,32:38:14.51:656,15,0	0/0:18,0:16:37.80:0,38,635	1/1:22,0:22:2.88:574,3,0	0/0:15,0:14:29.85:0,30,302	1/1:22,0:22:26.82:408,27,0	0/1:21,0:21:14.96:48,0,15	0/1:12,0:12:45.92:121,0,46	1/1:15,1:16:24.45:287,24,0	1/1:31,0:31:5.89:236,6,0	1/1:32,0:32:10.39:620,10,0	0/1:28,0:28:99:404,0,116	0/1:31,0:31:99:563,0,102	1/1:24,0:24:9.01:85,9,0
chr10	21174835	.	CCA	C	567.67	PASS	AB=0.794;AC=10;AF=0.179;AN=56;BaseQRankSum=7.703;DP=755;FS=0.000;HRun=0;HaplotypeScore=269.3311;InbreedingCoeff=-0.2191;MQ=64.12;MQ0=6;MQRankSum=-7.116;QD=1.86;ReadPosRankSum=-2.675;VQSLOD=1.8203;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,4:28:24.86:0,25,545	0/0:10,1:11:27.09:0,27,549	0/0:34,0:24:53.96:0,54,946	0/0:41,2:24:39.79:0,40,549	0/0:23,0:23:44.52:0,45,862	0/1:23,13:36:94.41:94,0,1035	0/0:17,2:18:36.12:0,36,699	0/0:51,0:49:99:0,141,2795	0/1:21,14:35:2.50:2,0,713	0/0:38,0:38:99:0,114,2311	0/0:17,2:18:32.78:0,33,670	0/0:27,9:37:8.43:0,8,713	0/1:14,5:20:39.37:39,0,631	0/1:23,9:34:72.03:72,0,684	0/0:29,0:29:84.29:0,84,1676	0/1:26,6:32:99:123,0,731	0/0:18,0:17:39.06:0,39,710	0/0:16,1:18:0.42:0,0,627	0/0:12,0:12:26.36:0,26,570	0/1:21,7:29:1.10:1,0,866	0/0:10,0:10:6:0,6,121	0/0:9,12:22:11.06:0,11,243	0/0:12,5:17:9.02:0,9,183	0/0:10,5:16:6.02:0,6,122	0/1:25,12:38:2.99:3,0,837	0/1:35,3:39:99:101,0,1940	0/1:26,5:31:99:100,0,1342	0/1:5,5:12:88.73:161,0,89
chr10	21174853	.	C	CTCTATCTA	2633.26	PASS	AB=0.968;AC=32;AF=0.615;AN=52;BaseQRankSum=-0.451;DP=796;FS=2.770;HRun=0;HaplotypeScore=340.9530;InbreedingCoeff=-0.0034;MQ=61.09;MQ0=19;MQRankSum=-0.672;QD=4.31;ReadPosRankSum=2.685;VQSLOD=1.4899;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:26:12.24:191,12,0	1/1:9,0:10:3.01:56,3,0	./.	./.	0/1:11,9:23:0.09:0,0,1	0/1:32,0:32:29.83:52,0,30	0/1:18,0:17:14.91:15,0,90	1/1:54,0:52:12.04:167,12,0	0/1:35,0:35:50.47:50,0,65	1/1:35,0:39:48.09:775,48,0	1/1:14,0:18:2.87:39,3,0	1/1:33,0:38:5.28:115,5,0	0/1:22,0:22:16.87:17,0,53	0/0:33,0:33:11.53:0,12,161	0/0:29,0:29:56.86:0,57,1192	0/1:39,0:39:77.12:77,0,233	1/1:12,5:21:5.23:84,5,0	1/1:15,0:18:17.97:242,18,0	1/1:7,6:12:18.06:566,18,0	0/1:27,0:27:34.03:34,0,34	0/0:16,0:16:8.94:0,9,127	0/0:32,0:32:14.18:0,14,141	0/1:24,0:24:4.18:4,0,167	1/1:19,0:19:2.73:24,3,0	0/1:35,0:35:7.80:8,0,253	0/1:40,0:40:99:114,0,133	0/1:34,0:33:78.33:78,0,145	0/1:23,0:23:87.65:88,0,316
chr10	21175214	.	C	CA	915.18	PASS	AB=0.813;AC=48;AF=0.857;AN=56;BaseQRankSum=2.111;DP=272;FS=4.989;HRun=16;HaplotypeScore=100.3688;InbreedingCoeff=0.3575;MQ=72.05;MQ0=2;MQRankSum=-3.203;QD=3.91;ReadPosRankSum=-2.756;VQSLOD=0.6310;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:15:14.12:63,14,0	1/1:0,1:1:2.99:24,3,0	1/1:27,0:12:4.07:12,4,0	0/0:22,0:11:4.43:0,4,23	1/1:5,0:4:2.49:6,2,0	1/1:9,0:9:8.65:46,9,0	1/1:9,0:9:9.63:40,10,0	0/0:9,0:11:1.25:0,1,4	1/1:11,0:11:5.72:29,6,0	1/1:4,5:10:20.64:140,21,0	1/1:3,1:5:8.76:53,9,0	1/1:10,0:11:9.40:44,9,0	1/1:14,0:14:12.81:48,13,0	1/1:9,0:10:12.44:63,12,0	0/0:5,0:5:3.98:0,4,20	1/1:13,0:14:11.28:56,11,0	0/1:2,2:5:4.91:47,0,5	1/1:4,0:2:5.68:28,6,0	1/1:7,0:6:3.88:26,4,0	1/1:16,0:15:9.62:55,10,0	1/1:6,0:6:1.25:3,1,0	1/1:12,0:12:16.12:80,16,0	1/1:10,0:10:10.60:46,11,0	0/1:3,0:3:0:0,0,0	1/1:4,0:4:2.90:16,3,0	1/1:13,0:13:7.10:33,7,0	1/1:9,0:10:11.30:57,11,0	1/1:2,0:2:2.84:14,3,0
chr10	21175316	.	CCGT	C	695.19	PASS	AB=0.750;AC=38;AF=0.905;AN=42;BaseQRankSum=-0.941;DP=76;FS=0.000;HRun=0;HaplotypeScore=21.3891;InbreedingCoeff=0.2064;MQ=51.25;MQ0=0;MQRankSum=-1.634;QD=9.79;ReadPosRankSum=1.535;VQSLOD=2.0259;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,3:6:8.89:77,9,0	./.	0/1:4,0:1:0:0,0,0	0/0:3,0:1:3.01:0,3,37	./.	1/1:3,0:3:5.92:39,6,0	1/1:2,11:13:17.21:139,17,0	1/1:1,0:1:0.47:1,0,0	1/1:2,0:2:5.90:38,6,0	./.	./.	1/1:0,2:2:3.01:30,3,0	1/1:0,2:2:2.97:20,3,0	1/1:1,2:3:6.01:57,6,0	1/1:1,0:1:2.97:20,3,0	1/1:0,2:2:3.01:30,3,0	./.	1/1:0,6:6:8.85:68,9,0	./.	0/1:0,2:2:0:0,0,0	1/1:0,8:8:2.94:19,3,0	1/1:3,2:5:5.93:52,6,0	1/1:0,3:3:2.92:17,3,0	1/1:1,1:2:3.01:31,3,0	1/1:1,1:2:6.02:81,6,0	1/1:3,0:3:4.99:24,5,0	./.	1/1:0,1:1:3.01:37,3,0
chr10	21175317	.	CGT	C	552.87	PASS	AB=0.911;AC=37;AF=0.881;AN=42;BaseQRankSum=0.504;DP=78;FS=2.762;HRun=0;HaplotypeScore=22.0956;InbreedingCoeff=0.1451;MQ=50.81;MQ0=0;MQRankSum=-2.250;QD=7.57;ReadPosRankSum=2.049;VQSLOD=2.6836;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,1:6:8.88:74,9,0	./.	0/1:3,1:1:0:0,0,0	0/0:3,0:1:3.01:0,3,37	./.	1/1:3,0:3:5.93:39,6,0	0/1:13,1:14:18.17:87,0,18	1/1:0,1:1:0.47:1,0,0	1/1:3,0:3:8.75:55,9,0	./.	./.	1/1:2,0:2:2.90:16,3,0	1/1:2,0:2:2.97:20,3,0	1/1:2,1:3:5.93:41,6,0	1/1:1,0:1:2.97:20,3,0	1/1:2,0:2:2.99:24,3,0	./.	1/1:6,0:6:8.85:68,9,0	./.	0/1:2,0:2:0:0,0,0	1/1:8,0:8:3.35:19,3,0	1/1:5,0:5:5.90:38,6,0	1/1:3,0:3:2.92:17,3,0	1/1:2,0:2:2.99:23,3,0	1/1:2,0:2:5.98:55,6,0	1/1:3,0:3:4.99:25,5,0	./.	1/1:1,0:1:2.99:24,3,0
chr10	21175325	.	C	CGT	1230.58	PASS	AB=1.000;AC=31;AF=0.738;AN=42;BaseQRankSum=-0.508;DP=109;FS=8.415;HRun=0;HaplotypeScore=26.2630;InbreedingCoeff=0.4591;MQ=60.60;MQ0=0;MQRankSum=-0.775;QD=13.38;ReadPosRankSum=1.648;VQSLOD=1.4451;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,1:10:14.75:161,15,0	./.	0/0:5,0:2:6.02:0,6,86	0/0:4,0:2:5.99:0,6,71	./.	1/1:3,0:3:5.82:33,6,0	1/1:19,2:21:9.03:324,9,0	0/0:2,0:2:3.48:0,3,46	1/1:3,0:3:1.47:50,1,0	./.	0/0:1,0:1:3.01:0,3,46	0/0:2,0:2:1.82:0,2,5	1/1:2,0:2:3:26,3,0	1/1:4,0:4:9.03:113,9,0	./.	1/1:3,0:3:6:58,6,0	./.	1/1:8,0:8:8.30:103,8,0	./.	1/1:2,0:2:3:27,3,0	1/1:10,0:10:8.31:110,8,0	1/1:4,0:5:1.21:7,1,0	0/1:3,0:3:0:0,0,0	1/1:5,1:6:12.04:165,12,0	1/1:4,2:6:11.82:110,12,0	1/1:4,0:4:4.93:57,5,0	./.	1/1:2,0:2:2.50:9,2,0
chr10	21180106	.	CTCCCTT	C	8947.81	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=3.651;DP=580;FS=7.412;HRun=0;HaplotypeScore=133.6175;InbreedingCoeff=0.9842;MQ=72.58;MQ0=17;MQRankSum=-0.857;QD=19.04;ReadPosRankSum=3.193;VQSLOD=3.9866;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:51,0:51:99:1097,140,0	1/1:7,0:7:17.94:143,18,0	0/0:24,0:21:53.99:0,54,556	0/0:24,0:20:10.34:0,10,297	1/1:18,0:16:41.74:319,42,0	1/1:29,0:29:59.56:560,60,0	1/1:20,0:19:53.68:416,54,0	0/0:44,0:43:99:0,114,1012	1/1:14,0:14:38.87:309,39,0	1/1:18,0:17:41.96:372,42,0	1/1:17,0:17:41.88:339,42,0	1/1:14,0:14:29.77:224,30,0	1/1:25,0:25:59.36:451,59,0	1/1:10,0:10:26.81:206,27,0	0/0:18,0:17:49.20:0,49,422	1/1:28,0:28:65.76:527,66,0	1/1:21,0:19:54.84:405,55,0	1/1:13,0:13:29.88:233,30,0	1/1:16,0:15:35.97:316,36,0	1/1:6,18:23:47.06:287,47,0	1/1:27,0:24:44.85:362,45,0	1/1:17,0:17:44.89:365,45,0	1/1:16,0:15:32.78:248,33,0	1/1:26,0:24:68.25:511,68,0	1/1:14,0:14:35.84:293,36,0	1/1:22,0:22:56.83:477,57,0	1/1:11,0:11:29.92:241,30,0	1/1:12,0:12:32.83:251,33,0
chr10	21180170	.	CTCTCCT	C	7011.89	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=0.363;DP=463;FS=79.374;HRun=0;HaplotypeScore=94.1720;InbreedingCoeff=0.9237;MQ=56.86;MQ0=33;MQRankSum=1.994;QD=20.21;ReadPosRankSum=3.596;VQSLOD=1.1039;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:40,0:39:97.79:852,98,0	1/1:6,0:6:17.98:150,18,0	0/0:46,0:21:30.24:0,30,377	0/0:46,0:17:13.35:0,13,245	1/1:10,0:10:23.97:200,24,0	1/1:14,0:13:38.83:310,39,0	1/1:19,0:16:41.89:354,42,0	1/1:16,0:12:33:301,33,0	1/1:13,0:13:20.75:255,21,0	1/1:1,9:10:29.55:230,30,0	1/1:3,0:3:9:79,9,0	1/1:13,0:13:38.71:300,39,0	1/1:14,0:11:32.81:261,33,0	1/1:13,0:13:38.86:312,39,0	0/0:23,0:21:61.81:0,62,496	1/1:18,0:17:50.88:421,51,0	1/1:13,0:13:35.54:250,36,0	1/1:12,0:11:32.85:254,33,0	1/1:15,0:12:35.89:303,36,0	1/1:12,0:11:29.86:239,30,0	1/1:19,0:17:47.55:357,48,0	1/1:9,5:14:26.72:228,27,0	1/1:2,10:12:5.54:50,6,0	1/1:17,0:14:35.14:286,35,0	1/1:10,0:10:26.82:211,27,0	1/1:12,0:12:33:294,33,0	1/1:16,0:16:47.69:374,48,0	1/1:6,0:6:17.93:143,18,0
chr10	21182978	.	T	TA	701.10	PASS	AB=0.952;AC=4;AF=0.071;AN=56;BaseQRankSum=-4.776;DP=697;FS=2.947;HRun=11;HaplotypeScore=78.8246;InbreedingCoeff=0.4629;MQ=74.95;MQ0=1;MQRankSum=1.015;QD=9.11;ReadPosRankSum=-4.103;VQSLOD=2.0267;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:89.65:0,90,696	0/0:13,0:13:29.82:0,30,228	0/1:19,0:16:7.96:8,0,65	0/1:16,0:17:7.99:8,0,92	0/0:28,0:29:79.58:0,80,600	0/0:23,0:23:62.75:0,63,487	0/0:19,0:20:46.18:0,46,334	1/1:12,27:39:81.43:792,81,0	0/0:17,0:18:43.86:0,44,331	0/0:30,1:31:38.24:0,38,480	0/0:24,0:24:32.39:0,32,427	0/0:19,0:19:50.80:0,51,394	0/0:29,0:29:71.66:0,72,553	0/0:23,0:23:44.77:0,45,346	0/0:39,0:39:99:0,111,856	0/0:37,0:38:99:0,110,836	0/0:26,2:28:42.17:0,42,504	0/0:12,0:12:24.73:0,25,223	0/0:24,1:26:34.29:0,34,440	0/0:20,1:21:5.38:0,5,225	0/0:30,0:30:77.59:0,78,598	0/0:25,0:25:62.26:0,62,486	0/0:17,0:18:43.86:0,44,331	0/0:27,0:27:71.70:0,72,557	0/0:34,0:35:79.69:0,80,605	0/0:22,0:22:46.32:0,46,352	0/0:30,1:30:23.73:0,24,544	0/0:7,0:7:14.91:0,15,116
chr10	21183613	.	TC	T	17619.74	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=4.140;DP=768;FS=1.988;HRun=7;HaplotypeScore=77.3231;InbreedingCoeff=0.9994;MQ=82.69;MQ0=0;MQRankSum=-9.423;QD=26.42;ReadPosRankSum=5.888;VQSLOD=5.0998;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:13,37:50:99:1132,111,0	1/1:1,8:9:24.05:245,24,0	0/0:23,0:23:54.08:0,54,653	0/0:28,0:28:75.18:0,75,897	1/1:4,33:37:90.19:917,90,0	1/1:4,31:35:84.19:857,84,0	1/1:0,26:26:75.17:765,75,0	0/0:25,0:25:45.14:0,45,565	1/1:0,26:26:75.17:765,75,0	1/1:1,34:35:99:1041,102,0	1/1:2,18:20:51.11:520,51,0	1/1:1,27:28:75.17:765,75,0	1/1:0,28:28:81.18:826,81,0	1/1:3,25:28:75.17:765,75,0	0/0:25,0:25:66.21:0,66,830	1/1:2,31:33:84.19:857,84,0	1/1:4,14:18:39.08:398,39,0	1/1:1,11:12:36.08:367,36,0	1/1:5,21:26:63.13:637,63,0	1/1:3,19:22:57.13:582,57,0	1/1:5,32:37:93.21:949,93,0	1/1:3,23:26:63.14:643,63,0	1/1:3,30:33:75.16:765,75,0	1/1:3,27:30:81.18:826,81,0	1/1:1,21:22:57.13:581,57,0	1/1:3,30:33:90.20:918,90,0	1/1:1,34:35:99:1009,99,0	1/1:0,18:18:48.11:490,48,0
chr10	21185397	.	T	TA	13657.07	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-14.620;DP=637;FS=12.212;HRun=7;HaplotypeScore=54.1432;InbreedingCoeff=0.9968;MQ=67.64;MQ0=0;MQRankSum=-3.194;QD=32.21;ReadPosRankSum=3.454;VQSLOD=3.8588;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,19:19:57.17:689,57,0	1/1:1,11:12:30.09:362,30,0	0/0:12,0:12:22.99:0,23,254	0/0:12,0:12:18.49:0,18,173	0/0:28,0:28:81.13:0,81,782	1/1:0,25:24:66.20:797,66,0	1/1:0,18:18:51.16:616,51,0	0/0:25,0:25:60.09:0,60,579	1/1:2,22:24:60.18:725,60,0	0/0:29,0:29:75.11:0,75,721	0/0:28,0:28:75.12:0,75,724	1/1:3,21:24:63.19:761,63,0	1/1:1,20:21:60.18:725,60,0	1/1:1,24:25:72.22:870,72,0	0/0:30,0:30:87.13:0,87,835	1/1:2,25:27:72.22:870,72,0	0/0:25,0:25:72.09:0,72,688	1/1:1,19:20:57.17:687,57,0	0/0:24,0:24:63.08:0,63,602	1/1:3,33:36:99:1183,102,0	1/1:1,16:17:45.14:544,45,0	1/1:0,12:12:30.09:362,30,0	1/1:2,22:25:66.07:776,66,0	1/1:2,6:8:18.06:217,18,0	1/1:2,28:30:78.24:942,78,0	1/1:3,21:24:34.20:683,34,0	1/1:2,43:45:99:1522,126,0	1/1:0,12:12:27.08:326,27,0
chr10	21185912	.	AGTTTT	A	19949.23	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=2.884;DP=606;FS=5.697;HRun=0;HaplotypeScore=126.3485;InbreedingCoeff=0.9018;MQ=68.86;MQ0=3;MQRankSum=-3.497;QD=37.64;ReadPosRankSum=5.582;VQSLOD=4.5565;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,33:36:81.28:1570,81,0	1/1:1,12:13:33.11:640,33,0	0/0:28,0:28:12.91:0,13,1367	0/0:23,0:20:38.56:0,39,771	1/1:4,25:29:63.21:1163,63,0	1/1:1,18:19:45.15:872,45,0	1/1:3,11:14:12.04:233,12,0	1/1:13,28:40:84.28:1538,84,0	1/1:3,12:15:30.10:582,30,0	1/1:6,19:25:54.17:1014,54,0	1/1:7,16:23:36.12:698,36,0	1/1:5,11:16:27.09:523,27,0	1/1:4,26:30:69.24:1338,69,0	1/1:2,22:24:45.15:866,45,0	0/0:21,0:21:54.19:0,54,1587	1/1:5,19:24:48.16:930,48,0	1/1:5,23:28:54.19:1046,54,0	1/1:4,7:11:18.06:349,18,0	1/1:9,13:22:39.13:636,39,0	1/1:5,21:26:57.19:1061,57,0	1/1:5,6:11:6.02:116,6,0	1/1:1,5:6:15.05:283,15,0	1/1:4,10:14:27.09:524,27,0	1/1:1,14:15:26.80:523,27,0	1/1:3,21:24:54.19:1047,54,0	1/1:8,17:25:51.17:944,51,0	1/1:3,29:32:69.24:1338,69,0	1/1:4,3:7:6.02:116,6,0
chr10	21186441	.	T	TG	29053.63	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-12.354;DP=809;FS=16.363;HRun=1;HaplotypeScore=67.6183;InbreedingCoeff=0.9978;MQ=86.12;MQ0=0;MQRankSum=-9.831;QD=40.81;ReadPosRankSum=4.000;VQSLOD=3.4516;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,46:47:99:1881,126,0	1/1:0,8:8:24.08:360,24,0	0/0:25,0:25:59.59:0,60,723	0/0:34,0:34:92.89:0,93,1173	1/1:0,18:18:51.17:763,51,0	1/1:2,19:21:51.17:764,51,0	1/1:3,28:31:72.24:1079,72,0	1/1:0,41:41:99:1801,123,0	1/1:0,32:32:87.29:1304,87,0	1/1:2,31:33:93.24:1320,93,0	1/1:0,18:18:51.17:764,51,0	1/1:2,40:42:99:1708,114,0	1/1:1,26:27:78.26:1169,78,0	1/1:4,34:39:99:1526,102,0	0/0:38,0:38:99:0,111,1439	1/1:0,42:41:99:1889,126,0	1/1:0,24:24:63.21:944,63,0	1/1:1,18:19:57.19:842,57,0	1/1:1,25:26:75.25:1121,75,0	1/1:0,22:22:57.19:854,57,0	1/1:2,48:49:99:1978,132,0	1/1:0,26:26:78.26:1168,78,0	1/1:0,27:28:78.26:1165,78,0	1/1:2,29:31:75.25:1124,75,0	1/1:0,15:15:45.15:674,45,0	1/1:2,33:35:99:1464,99,0	1/1:0,30:30:72.08:1077,72,0	1/1:0,7:7:21.07:315,21,0
chr10	21188752	.	C	CA	1328.10	PASS	AB=0.897;AC=9;AF=0.161;AN=56;BaseQRankSum=-3.318;DP=641;FS=7.884;HRun=10;HaplotypeScore=96.5594;InbreedingCoeff=0.8104;MQ=72.02;MQ0=0;MQRankSum=-1.039;QD=13.69;ReadPosRankSum=-1.055;VQSLOD=3.0722;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:67,0:67:99:0,162,1323	0/0:8,0:8:20.97:0,21,172	0/0:13,0:15:19.65:0,20,125	0/0:5,0:6:8.89:0,9,65	0/1:23,3:26:17.75:18,0,399	0/0:26,0:26:70.73:0,71,571	0/0:20,1:22:17.47:0,17,342	0/0:28,0:28:59.87:0,60,491	0/0:29,0:29:77.89:0,78,640	1/1:2,13:15:33.05:338,33,0	1/1:1,11:12:33.04:339,33,0	0/0:35,0:35:54.12:0,54,638	0/0:28,1:32:45.97:0,46,549	0/0:26,0:26:56.88:0,57,468	0/0:30,0:30:71.89:0,72,591	0/0:25,0:24:53.85:0,54,436	1/1:7,22:29:7.85:494,8,0	0/0:20,0:20:50.92:0,51,418	1/1:4,11:15:8.44:295,8,0	0/0:30,0:30:74.86:0,75,610	0/0:13,0:13:32.94:0,33,269	0/0:20,0:20:53.91:0,54,439	0/0:21,1:22:21.94:0,22,384	0/0:15,0:17:40.03:0,40,307	0/0:19,0:19:47.93:0,48,394	0/0:22,1:24:23.99:0,24,393	0/0:21,0:22:31.12:0,31,399	0/0:8,0:7:23.97:0,24,197
chr10	21189367	.	A	AT	17430.31	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-15.944;DP=698;FS=0.991;HRun=4;HaplotypeScore=65.9503;InbreedingCoeff=0.9900;MQ=82.90;MQ0=0;MQRankSum=-2.459;QD=36.39;ReadPosRankSum=4.101;VQSLOD=5.0020;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,35:39:99:1395,102,0	1/1:2,12:14:36.12:492,36,0	0/0:21,0:21:62.99:0,63,674	0/0:20,0:20:54.09:0,54,584	1/1:2,19:21:54.18:731,54,0	1/1:0,23:23:69.23:944,69,0	1/1:2,37:39:99:1396,102,0	0/0:28,0:28:78.21:0,78,877	1/1:1,19:21:57.19:775,57,0	0/0:34,0:34:93.24:0,93,1037	0/0:11,0:11:30.09:0,30,340	1/1:2,43:45:99:1601,117,0	1/1:2,20:22:60.20:818,60,0	1/1:1,25:26:63.21:862,63,0	0/0:48,0:48:99:0,132,1497	1/1:4,33:37:99:1354,99,0	0/0:34,0:34:99:0,99,1098	1/1:2,28:30:81.27:1104,81,0	0/0:23,0:23:57.12:0,57,621	1/1:3,11:14:30.10:410,30,0	1/1:1,23:24:66.22:903,66,0	1/1:3,10:13:30.10:401,30,0	1/1:0,16:16:45.15:616,45,0	1/1:1,26:27:75.25:1026,75,0	1/1:0,12:12:36.12:492,36,0	1/1:1,30:31:90.27:1209,90,0	1/1:1,19:21:57.19:779,57,0	1/1:0,4:4:9.03:123,9,0
chr10	21189797	.	T	TA	1896.99	PASS	AB=0.533;AC=7;AF=0.125;AN=56;BaseQRankSum=-2.733;DP=408;FS=6.045;HRun=8;HaplotypeScore=61.6216;InbreedingCoeff=0.8614;MQ=75.02;MQ0=0;MQRankSum=-1.324;QD=25.99;ReadPosRankSum=-0.855;VQSLOD=4.1336;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:40.30:0,40,526	0/0:4,0:4:9:0,9,82	0/0:9,0:9:14.99:0,15,137	0/0:8,0:8:15:0,15,137	0/0:22,0:22:54.01:0,54,494	0/0:14,0:13:42.02:0,42,384	0/0:12,0:12:36.02:0,36,329	0/0:29,0:29:78.03:0,78,714	0/0:9,0:9:26.98:0,27,240	1/1:3,19:22:60.17:685,60,0	0/1:1,7:8:3.40:218,0,3	0/0:11,0:11:33.02:0,33,302	0/0:16,0:16:41.98:0,42,377	0/0:9,0:9:24.01:0,24,220	0/0:13,0:13:29.98:0,30,267	0/0:13,0:13:36.01:0,36,329	1/1:4,26:30:72.21:831,72,0	0/0:16,0:16:45.02:0,45,412	1/1:4,9:13:27.08:312,27,0	0/0:18,0:17:47.98:0,48,431	0/0:6,0:6:15.01:0,15,137	0/0:11,0:11:33.01:0,33,297	0/0:13,0:13:26.98:0,27,241	0/0:13,0:13:32.99:0,33,295	0/0:23,0:24:71.07:0,71,634	0/0:13,0:13:39:0,39,352	0/0:15,0:15:41.98:0,42,376	0/0:15,0:15:45.02:0,45,412
chr10	21189911	.	T	TAA	9331.48	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-3.907;DP=378;FS=0.000;HRun=8;HaplotypeScore=49.6120;InbreedingCoeff=0.8809;MQ=73.53;MQ0=0;MQRankSum=-1.430;QD=28.80;ReadPosRankSum=5.223;VQSLOD=4.1032;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,17:20:33.11:516,33,0	1/1:2,2:4:9.03:142,9,0	0/0:11,0:9:9.01:0,9,99	0/0:7,0:6:11.18:0,11,98	1/1:4,23:27:63.13:937,63,0	1/1:3,17:23:49.63:692,50,0	1/1:1,4:5:9.03:140,9,0	0/0:22,0:22:45.07:0,45,484	1/1:1,3:4:9.03:143,9,0	1/1:2,1:16:29.43:306,29,0	1/1:6,0:22:33.83:367,34,0	1/1:1,12:13:24.08:373,24,0	1/1:1,13:14:27.09:429,27,0	1/1:2,5:7:9.20:186,9,0	0/0:14,0:14:36.06:0,36,388	1/1:1,11:12:24.08:381,24,0	1/1:6,0:20:38.78:381,39,0	1/1:1,17:17:42.14:658,42,0	1/1:2,0:12:25.02:210,25,0	1/1:3,10:13:27.06:401,27,0	1/1:0,4:4:9.03:143,9,0	1/1:0,5:5:12:145,12,0	1/1:1,6:8:20.56:294,21,0	1/1:2,5:7:15.05:238,15,0	1/1:6,12:20:32.08:446,32,0	1/1:4,19:24:59.68:877,60,0	1/1:3,13:14:39.10:592,39,0	1/1:0,8:8:21.07:333,21,0
chr10	21191227	.	G	GGCA	7689.10	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-1.481;DP=666;FS=0.000;HRun=0;HaplotypeScore=94.4595;InbreedingCoeff=0.9934;MQ=75.71;MQ0=0;MQRankSum=-1.983;QD=55.72;ReadPosRankSum=-2.924;VQSLOD=6.0594;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,144,2361	0/0:10,0:10:30.10:0,30,500	0/0:15,0:15:20.88:0,21,280	0/0:12,0:12:13.31:0,13,264	0/0:28,0:28:72.22:0,72,1172	0/0:16,0:16:48.16:0,48,800	0/0:35,0:35:99:0,102,1670	1/1:7,18:26:69.23:1475,69,0	0/0:25,0:25:72.24:0,72,1180	1/1:1,31:32:90.31:2018,90,0	1/1:3,21:24:63.22:1402,63,0	0/0:32,0:32:93.30:0,93,1519	0/0:25,0:25:75.26:0,75,1248	0/0:28,0:28:81.28:0,81,1349	0/0:15,0:15:45.15:0,45,750	0/0:16,0:16:48.16:0,48,800	1/1:3,30:33:75.21:1684,75,0	0/0:19,0:19:57.17:0,57,916	1/1:7,15:23:54.17:1110,54,0	0/0:13,0:13:36.12:0,36,598	0/0:43,0:43:99:0,114,1887	0/0:19,0:19:57.19:0,57,950	0/0:15,0:15:42.11:0,42,670	0/0:23,0:23:63.22:0,63,1045	0/0:20,0:20:57.19:0,57,950	0/0:18,0:18:54.18:0,54,889	0/0:30,0:29:87.30:0,87,1444	0/0:21,0:21:63.19:0,63,1014
chr10	21192347	.	T	TACACACACAC	8545.58	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-0.769;DP=822;FS=4.041;HRun=0;HaplotypeScore=236.6643;InbreedingCoeff=0.9649;MQ=64.95;MQ0=2;MQRankSum=-8.602;QD=56.59;ReadPosRankSum=-5.434;VQSLOD=3.1534;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:57.12:0,57,1550	0/0:13,0:13:33.10:0,33,933	0/0:28,0:28:10.45:0,10,1348	0/0:20,0:19:46.54:0,47,1088	0/0:39,0:40:99:0,108,3063	0/0:26,0:26:69.24:0,69,2093	0/0:28,0:28:72.23:0,72,2134	1/1:53,0:53:72.24:2232,72,0	0/0:24,0:24:69.22:0,69,2032	1/1:16,19:38:77.71:3098,78,0	1/1:14,11:27:35.78:1738,36,0	0/0:32,0:32:90.28:0,90,2573	0/0:37,0:38:93.25:0,93,2590	0/0:36,0:36:96.30:0,96,2809	0/0:35,0:35:99:0,99,2867	0/0:42,0:42:99:0,114,3302	1/1:10,5:15:6.02:268,6,0	0/0:20,0:20:50.76:0,51,1431	1/1:10,4:16:30.10:1209,30,0	0/0:40,0:40:96.30:0,96,2739	0/0:22,0:22:33.17:0,33,1518	0/0:26,0:26:72.23:0,72,1889	0/0:33,0:33:90.27:0,90,2655	0/0:31,0:31:78.20:0,78,2205	0/0:27,0:27:75.26:0,75,2155	0/0:29,0:29:48.27:0,48,2121	0/0:39,0:39:99:0,108,3161	0/0:15,0:15:33.11:0,33,1027
chr10	21192763	.	C	CCT	4133.81	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-9.430;DP=682;FS=8.746;HRun=0;HaplotypeScore=94.9082;InbreedingCoeff=0.9939;MQ=74.87;MQ0=0;MQRankSum=-0.581;QD=36.91;ReadPosRankSum=-1.796;VQSLOD=4.7966;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:96.25:0,96,1209	0/0:9,0:9:18.03:0,18,220	0/0:12,0:12:24.05:0,24,274	0/0:22,0:22:32.60:0,33,377	0/0:17,0:17:45.12:0,45,550	0/0:32,0:31:72.18:0,72,893	0/0:19,0:19:54.18:0,54,712	1/1:3,16:20:45.11:644,45,0	0/0:31,0:31:75.14:0,75,888	1/1:0,24:24:72.19:1113,72,0	1/1:3,17:21:41.81:708,42,0	0/0:32,0:32:78.20:0,78,960	0/0:33,0:33:81.23:0,81,1028	0/0:26,0:26:75.10:0,75,939	0/0:31,0:31:90.23:0,90,1141	0/0:33,0:33:92.88:0,93,1171	1/1:1,21:22:48.15:789,48,0	0/0:24,0:24:71.97:0,72,857	1/1:2,21:25:63:880,63,0	0/0:25,0:25:51.11:0,51,615	0/0:33,0:33:93.25:0,93,1169	0/0:22,0:22:60.19:0,60,778	0/0:29,0:29:69.21:0,69,894	0/0:30,0:30:78.12:0,78,948	0/0:20,0:20:51.17:0,51,673	0/0:27,0:27:66.18:0,66,803	0/0:24,0:24:69.19:0,69,868	0/0:6,0:6:15.05:0,15,198
chr10	21194234	.	A	AG	30109.40	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-13.004;DP=878;FS=0.390;HRun=2;HaplotypeScore=78.0297;InbreedingCoeff=0.9999;MQ=87.69;MQ0=0;MQRankSum=-8.714;QD=39.10;ReadPosRankSum=4.151;VQSLOD=5.2591;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,44:48:99:1726,120,0	1/1:0,12:12:33.11:475,33,0	0/0:26,0:26:69.11:0,69,795	0/0:34,0:34:86.84:0,87,1023	1/1:1,32:33:93.31:1337,93,0	1/1:1,21:22:54.18:778,54,0	1/1:2,38:39:96.32:1372,96,0	1/1:2,35:37:99:1494,105,0	1/1:0,33:33:96.32:1382,96,0	1/1:0,35:35:99:1512,105,0	1/1:0,27:27:72.24:1035,72,0	1/1:1,34:35:99:1424,99,0	1/1:2,32:34:87.12:1249,87,0	1/1:2,38:40:99:1467,102,0	0/0:48,0:48:99:0,138,1710	1/1:3,29:32:78.26:1123,78,0	1/1:0,32:32:96.32:1382,96,0	1/1:1,25:26:69.23:989,69,0	1/1:1,15:16:45.13:613,45,0	1/1:0,29:29:81.27:1166,81,0	1/1:0,33:33:90.30:1296,90,0	1/1:1,27:28:81.27:1164,81,0	1/1:0,30:30:87.21:1226,87,0	1/1:2,27:29:81.27:1166,81,0	1/1:0,26:26:72.24:1036,72,0	1/1:1,41:42:99:1668,120,0	1/1:0,33:33:93.31:1339,93,0	1/1:2,16:18:48.16:691,48,0
chr10	21195975	.	CT	C	2959.02	PASS	AB=0.875;AC=9;AF=0.161;AN=56;BaseQRankSum=9.902;DP=581;FS=12.854;HRun=2;HaplotypeScore=56.5323;InbreedingCoeff=0.8438;MQ=85.64;MQ0=0;MQRankSum=-0.634;QD=25.51;ReadPosRankSum=2.089;VQSLOD=2.0884;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,102,1529	0/0:11,0:11:33.11:0,33,494	0/0:22,0:22:60.14:0,60,832	0/0:14,0:14:39.07:0,39,503	0/0:24,0:24:72.23:0,72,1058	0/0:20,0:20:60.16:0,60,840	0/0:16,0:16:48.15:0,48,697	0/0:29,0:29:84.26:0,84,1190	0/0:22,0:22:66.22:0,66,989	1/1:1,24:25:72.17:889,72,0	1/1:0,26:26:66.21:857,66,0	0/0:24,0:24:72.23:0,72,1059	0/0:23,0:23:69.23:0,69,1033	0/0:22,0:22:66.22:0,66,989	0/0:27,0:27:81.24:0,81,1155	0/0:23,0:23:69.21:0,69,996	1/1:1,17:18:48.16:623,48,0	0/0:14,0:14:42.14:0,42,628	1/1:0,19:19:54.16:685,54,0	0/0:17,0:17:51.12:0,51,720	0/0:17,0:17:51.17:0,51,761	0/0:15,0:15:45.15:0,45,662	0/0:24,0:24:72.22:0,72,1035	0/0:20,0:20:60.19:0,60,877	0/0:24,0:24:69.23:0,69,1034	0/1:24,4:28:69.98:70,0,958	0/0:20,0:20:60.19:0,60,881	0/0:3,0:3:6.02:0,6,90
chr10	21196424	.	A	AT	819.65	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-6.313;DP=598;FS=1.657;HRun=6;HaplotypeScore=62.2603;InbreedingCoeff=0.9435;MQ=81.63;MQ0=0;MQRankSum=-3.076;QD=26.44;ReadPosRankSum=-4.285;VQSLOD=2.0930;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:72.16:0,72,735	0/0:10,0:10:30.07:0,30,306	0/0:18,0:18:41.84:0,42,402	0/0:15,0:15:35.94:0,36,329	0/0:32,0:32:87.15:0,87,872	0/0:17,0:17:45.07:0,45,446	0/0:23,0:23:54.12:0,54,550	1/1:4,27:31:75.20:914,75,0	0/0:23,0:23:63.14:0,63,642	0/0:25,0:25:69.16:0,69,704	0/0:28,0:28:84.18:0,84,850	0/0:20,0:20:60.14:0,60,612	0/0:23,0:23:60.13:0,60,612	0/0:25,0:25:69.14:0,69,697	0/0:20,0:20:60.14:0,60,612	0/0:21,0:21:48.08:0,48,482	0/0:18,0:18:51.11:0,51,520	0/0:29,0:29:78.17:0,78,795	0/0:18,0:18:39.08:0,39,398	0/0:24,0:24:69.16:0,69,704	0/0:14,0:14:39.05:0,39,389	0/0:22,0:22:57.10:0,57,573	0/0:30,0:30:75.17:0,75,765	0/0:10,0:10:27.06:0,27,275	0/0:27,0:27:72.13:0,72,722	0/0:20,0:20:57.11:0,57,575	0/0:24,0:24:69.05:0,69,687	0/0:3,0:3:9.02:0,9,92
chr10	21196467	.	AT	A	1996.09	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=10.465;DP=549;FS=1.460;HRun=9;HaplotypeScore=56.3870;InbreedingCoeff=0.9623;MQ=76.46;MQ0=0;MQRankSum=-0.430;QD=22.68;ReadPosRankSum=2.053;VQSLOD=4.5513;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:63.16:0,63,707	0/0:11,0:11:30.09:0,30,346	0/0:25,0:22:35.33:0,35,351	0/0:12,0:10:4.56:0,5,33	0/0:35,0:35:99:0,99,1128	0/0:16,0:16:45.13:0,45,519	0/0:11,0:11:33.09:0,33,371	0/0:26,0:26:60.18:0,60,692	0/0:15,0:15:45.11:0,45,500	1/1:2,25:27:75.01:678,75,0	1/1:0,24:24:63.02:577,63,0	0/0:23,0:23:60.18:0,60,692	0/0:16,0:16:39.10:0,39,438	0/0:17,0:17:39.12:0,39,450	0/0:18,0:18:42.12:0,42,485	0/0:19,0:19:51.15:0,51,589	1/1:2,24:26:69.03:631,69,0	0/0:19,1:20:26.65:0,27,528	1/1:1,10:11:30.01:271,30,0	0/0:25,0:25:69.20:0,69,788	0/0:16,0:16:48.14:0,48,554	0/0:19,0:19:54.15:0,54,614	0/0:24,0:24:63.19:0,63,727	0/0:11,0:11:33.10:0,33,381	0/0:28,0:28:78.23:0,78,900	0/0:20,0:20:54.16:0,54,623	0/0:18,0:18:45.11:0,45,500	0/0:12,0:12:36.11:0,36,415
chr10	21197958	.	A	AAGAG	1782.70	PASS	AB=1.000;AC=29;AF=0.558;AN=52;BaseQRankSum=-1.531;DP=743;FS=6.821;HRun=0;HaplotypeScore=180.9308;InbreedingCoeff=0.4098;MQ=62.61;MQ0=6;MQRankSum=-3.350;QD=3.71;ReadPosRankSum=-2.639;VQSLOD=1.7846;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:38,0:38:30.36:51,0,30	0/1:12,0:12:13.99:36,0,14	0/0:19,0:12:16.83:0,17,173	0/0:16,0:12:17.55:0,18,167	0/0:33,0:33:5.95:0,6,84	1/1:23,0:23:2.99:46,3,0	1/1:33,0:33:4.57:65,5,0	1/1:31,0:24:23.99:329,24,0	1/1:10,19:31:8.74:110,9,0	0/0:37,0:37:94.11:0,94,1062	0/0:26,0:26:17.52:0,18,153	1/1:31,0:31:11.99:145,12,0	1/1:27,0:27:20.96:170,21,0	1/1:27,0:27:5.75:62,6,0	0/0:40,0:40:87.29:0,87,1356	1/1:33,0:36:14.52:194,15,0	0/0:26,0:27:21.04:0,21,219	0/1:15,0:13:28.82:75,0,29	0/0:22,0:21:49.23:0,49,664	1/1:29,0:29:19.52:137,20,0	0/1:19,0:19:0:0,0,0	./.	0/1:23,0:23:0.24:1,0,0	0/1:33,0:33:35.92:53,0,36	./.	0/1:33,0:31:34.02:423,0,34	1/1:30,0:30:2.55:44,3,0	1/1:8,0:8:3.40:19,3,0
chr10	21197971	.	AGAGTGTGTGTGTGT	A	4592.65	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=5.663;DP=719;FS=5.676;HRun=0;HaplotypeScore=212.6879;InbreedingCoeff=0.6746;MQ=57.83;MQ0=9;MQRankSum=0.664;QD=34.53;ReadPosRankSum=2.285;VQSLOD=3.6383;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:36:44.45:0,44,656	0/0:15,0:15:11.06:0,11,225	0/0:15,0:8:12.70:0,13,123	0/0:13,0:9:7.11:0,7,126	0/0:32,0:31:6:0,6,210	0/0:28,0:28:5.60:0,6,256	0/0:34,0:34:9.01:0,9,289	0/0:25,0:18:47.55:0,48,365	0/0:28,0:29:9.50:0,10,522	1/1:2,29:36:99:2445,108,0	1/1:2,19:23:18.06:749,18,0	0/0:30,0:30:11.99:0,12,395	0/0:26,0:26:66.06:0,66,1823	0/0:29,0:28:8.90:0,9,307	0/0:34,0:34:87.22:0,87,3922	0/0:33,0:33:23.97:0,24,644	1/1:3,22:27:21.02:655,21,0	0/0:19,0:17:1.07:0,1,679	1/1:3,19:22:59.45:744,59,0	0/0:27,0:27:51.22:0,51,956	1/1:23,0:23:0.47:1,0,0	0/0:29,0:29:6.01:0,6,57	0/0:26,0:26:5.59:0,6,48	0/0:27,0:27:11.96:0,12,394	0/0:18,0:18:2.99:0,3,23	0/0:31,0:29:78.08:0,78,2535	0/0:23,0:23:5.78:0,6,44	0/0:6,0:6:8.97:0,9,221
chr10	21197973	.	A	AGAGTGTGT	4765.82	PASS	AB=0.631;AC=28;AF=0.538;AN=52;BaseQRankSum=-6.302;DP=736;FS=2.250;HRun=0;HaplotypeScore=189.2501;InbreedingCoeff=0.5000;MQ=57.66;MQ0=9;MQRankSum=-3.657;QD=10.41;ReadPosRankSum=-3.121;VQSLOD=3.0926;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:40:20.72:411,21,0	0/1:3,8:15:29.64:128,0,30	0/0:14,0:8:7.56:0,8,87	0/0:14,0:9:10.88:0,11,100	0/0:8,23:32:5.91:0,6,41	1/1:4,22:31:4.57:138,5,0	1/1:7,0:35:8.34:124,8,0	1/1:23,0:16:32.82:253,33,0	0/1:26,0:27:20.37:88,0,20	0/0:37,0:36:96.93:0,97,1068	0/0:21,0:21:13.39:0,13,241	1/1:3,20:30:12:297,12,0	1/1:21,0:31:41.31:616,41,0	1/1:1,19:27:2.59:133,3,0	0/0:29,0:34:87.02:0,87,1515	1/1:2,19:31:15.66:523,16,0	0/0:27,0:27:20.99:0,21,324	0/1:8,1:19:30.06:432,0,30	0/0:23,0:22:56.46:0,56,484	1/1:19,0:26:44.87:361,45,0	0/0:5,15:26:0:0,0,0	./.	0/1:4,18:26:0.14:0,0,1	0/1:5,0:33:27.36:27,0,35	./.	1/1:9,15:28:37.13:1091,37,0	0/1:4,1:24:0:0,0,0	1/1:2,0:6:8.98:142,9,0
chr10	21200007	.	C	CATATATAT	1800.94	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-0.634;DP=520;FS=5.549;HRun=0;HaplotypeScore=130.5161;InbreedingCoeff=0.7233;MQ=72.18;MQ0=1;MQRankSum=-2.889;QD=41.88;ReadPosRankSum=-5.492;VQSLOD=2.1113;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:96.23:0,96,2379	0/0:13,0:13:30.10:0,30,748	0/0:8,0:8:0.04:0,0,4	0/0:15,0:13:3.92:0,4,81	0/0:28,0:29:75.21:0,75,1615	0/0:20,0:20:51.17:0,51,1306	0/0:11,0:11:30.09:0,30,675	1/1:32,7:43:63.19:1895,63,0	0/0:16,0:16:45.15:0,45,1107	0/0:13,0:13:33.11:0,33,711	0/0:18,0:19:46.04:0,46,1184	0/0:16,0:16:42.14:0,42,1074	0/0:18,0:18:45.14:0,45,1094	0/0:16,0:16:33.10:0,33,783	0/0:19,0:19:54.18:0,54,1348	0/0:10,0:10:24.08:0,24,568	0/0:29,0:29:63.22:0,63,1654	0/0:19,0:19:45.15:0,45,1148	0/0:15,0:15:33.11:0,33,868	0/0:26,0:26:66.23:0,66,1706	0/0:7,0:7:12.04:0,12,315	0/0:7,0:7:18.06:0,18,473	0/0:9,0:9:18.06:0,18,466	0/0:10,0:10:15.05:0,15,316	0/0:22,0:21:60.21:0,60,1472	0/0:23,0:23:60.20:0,60,1460	0/0:32,0:32:81.28:0,81,2114	0/0:9,0:9:23.66:0,24,630
chr10	21200091	.	A	AC	5537.80	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-13.061;DP=629;FS=5.403;HRun=0;HaplotypeScore=62.7532;InbreedingCoeff=0.9989;MQ=78.96;MQ0=0;MQRankSum=-1.363;QD=44.30;ReadPosRankSum=-1.841;VQSLOD=4.5555;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,134,1847	0/0:9,0:9:27.07:0,27,360	0/0:10,0:10:27.08:0,27,353	0/0:22,0:22:63.17:0,63,853	0/0:33,0:33:93.29:0,93,1282	0/0:26,0:26:78.26:0,78,1090	0/0:21,0:21:60.17:0,60,802	1/1:2,33:35:99:1573,99,0	0/0:13,0:13:36.12:0,36,504	1/1:1,19:20:54.13:807,54,0	1/1:0,19:19:54.18:863,54,0	0/0:21,0:21:63.20:0,63,864	0/0:25,0:25:69.23:0,69,965	0/0:25,0:25:75.25:0,75,1048	0/0:24,0:24:66.22:0,66,923	0/0:19,0:19:51.17:0,51,713	1/1:0,31:31:84.29:1343,84,0	0/0:16,0:16:45.15:0,45,628	1/1:0,20:20:60.20:953,60,0	0/0:30,0:30:90.27:0,90,1224	0/0:12,0:12:36.12:0,36,502	0/0:19,0:19:57.17:0,57,779	0/0:15,0:15:42.14:0,42,587	0/0:26,0:26:78.26:0,78,1090	0/0:23,0:23:69.21:0,69,933	0/0:26,1:27:33.29:0,33,1043	0/0:34,0:34:99:0,99,1366	0/0:8,0:8:24.08:0,24,336
chr10	21200927	.	G	GTT	874.76	PASS	AB=0.958;AC=3;AF=0.054;AN=56;BaseQRankSum=-7.415;DP=611;FS=8.356;HRun=9;HaplotypeScore=114.4271;InbreedingCoeff=0.5042;MQ=74.20;MQ0=0;MQRankSum=-1.274;QD=16.82;ReadPosRankSum=-8.012;VQSLOD=-0.5077;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:77.37:0,77,457	0/0:17,0:17:38.81:0,39,213	0/0:15,0:12:3.10:0,3,68	0/0:18,0:15:16.66:0,17,158	0/0:33,0:33:74.37:0,74,446	0/0:22,0:22:61.06:0,61,337	0/0:12,0:12:28.98:0,29,158	1/1:7,21:29:65.59:969,66,0	0/0:14,0:15:13.12:0,13,175	0/0:21,0:21:48.44:0,48,250	0/0:16,0:17:11.19:0,11,174	0/0:28,0:28:57.34:0,57,342	0/0:28,0:28:55.43:0,55,348	0/0:13,0:13:34.17:0,34,187	0/0:39,0:39:99:0,102,1078	0/0:17,0:17:26.59:0,27,213	0/0:38,0:38:67.11:0,67,493	0/0:20,0:20:22.74:0,23,243	0/0:17,0:17:8.80:0,9,157	0/0:25,0:25:61.15:0,61,351	0/0:11,0:11:4.83:0,5,123	0/0:18,0:18:5.09:0,5,150	0/1:22,0:23:2.44:2,0,221	0/0:14,0:14:23.91:0,24,141	0/0:32,0:32:39.72:0,40,317	0/0:21,0:21:32.53:0,33,192	0/0:25,0:25:54.51:0,55,335	0/0:8,0:8:23.16:0,23,127
chr10	21202350	.	CT	C	928.71	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.810;DP=733;FS=7.700;HRun=2;HaplotypeScore=69.9880;InbreedingCoeff=0.9997;MQ=87.24;MQ0=0;MQRankSum=-4.212;QD=34.40;ReadPosRankSum=-3.831;VQSLOD=1.9472;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,126,1884	0/0:15,0:15:42.14:0,42,626	0/0:24,0:24:65.31:0,65,850	0/0:29,0:29:70.21:0,70,901	0/0:30,0:30:87.28:0,87,1279	0/0:20,0:20:60.20:0,60,897	0/0:25,0:25:75.24:0,75,1103	1/1:0,27:27:81.24:1024,81,0	0/0:15,0:15:45.14:0,45,652	0/0:27,0:27:81.27:0,81,1200	0/0:16,0:16:48.16:0,48,719	0/0:32,0:32:93.31:0,93,1376	0/0:29,0:29:84.28:0,84,1238	0/0:37,0:37:99:0,111,1622	0/0:36,0:36:99:0,105,1555	0/0:31,0:31:90.29:0,90,1310	0/0:28,0:28:84.28:0,84,1258	0/0:19,0:19:57.19:0,57,854	0/0:30,0:30:90.30:0,90,1346	0/0:37,0:37:99:0,111,1663	0/0:32,0:32:96.33:0,96,1438	0/0:25,0:25:75.25:0,75,1123	0/0:22,0:22:66.22:0,66,971	0/0:23,0:23:69.19:0,69,1009	0/0:21,0:21:63.21:0,63,937	0/0:24,0:24:72.24:0,72,1079	0/0:26,0:26:78.26:0,78,1169	0/0:11,0:11:33.11:0,33,495
chr10	21205616	.	GGTGTGT	G	3023.28	PASS	AB=1.000;AC=33;AF=0.688;AN=48;BaseQRankSum=1.530;DP=518;FS=14.530;HRun=0;HaplotypeScore=103.2008;InbreedingCoeff=0.6334;MQ=65.10;MQ0=22;MQRankSum=1.490;QD=10.46;ReadPosRankSum=2.984;VQSLOD=1.2546;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:21:12.04:226,12,0	1/1:9,0:9:6:75,6,0	./.	./.	./.	1/1:22,0:21:20.90:220,21,0	1/1:28,0:27:12.02:193,12,0	0/0:26,0:25:4.52:0,5,24	1/1:17,0:17:15.05:277,15,0	0/0:26,0:26:39.11:0,39,836	0/0:19,0:18:18.03:0,18,329	1/1:14,0:13:12.04:218,12,0	0/0:13,0:13:2.49:0,2,9	./.	1/1:14,0:12:21.07:399,21,0	1/1:21,0:20:18.05:302,18,0	0/0:20,0:20:12.04:0,12,293	1/1:10,0:10:5.99:81,6,0	0/0:15,0:15:9.03:0,9,161	1/1:12,0:12:8.98:123,9,0	1/1:21,0:18:6.02:107,6,0	0/0:9,7:15:0:0,0,0	1/1:11,3:14:3.01:56,3,0	1/1:25,0:25:24.46:382,24,0	1/1:14,0:14:15.05:253,15,0	0/1:15,0:14:21.73:22,0,47	1/1:12,0:12:9:133,9,0	1/1:13,0:11:6.02:117,6,0
chr10	21207070	.	T	TA	2671.30	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-2.172;DP=659;FS=5.263;HRun=8;HaplotypeScore=202.0585;InbreedingCoeff=0.9963;MQ=79.93;MQ0=0;MQRankSum=-1.610;QD=26.45;ReadPosRankSum=-1.247;VQSLOD=0.9187;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:84.03:0,84,762	0/0:10,0:10:30.02:0,30,273	0/0:13,0:13:23.84:0,24,187	0/0:20,0:20:18.30:0,18,314	0/0:33,0:33:87.02:0,87,786	0/0:13,0:13:36.02:0,36,328	0/0:21,0:21:57:0,57,510	0/0:33,0:33:83.98:0,84,748	0/0:22,0:22:60.03:0,60,546	1/1:3,18:21:57.16:650,57,0	1/1:2,29:31:86.97:919,87,0	0/0:25,0:25:59.94:0,60,532	0/0:22,0:22:63.01:0,63,569	0/0:25,0:25:69.02:0,69,624	0/0:38,0:38:99:0,111,1011	0/0:22,0:22:63.03:0,63,572	1/1:3,22:25:57.16:650,57,0	0/0:20,0:20:48.02:0,48,437	1/1:8,16:24:54.15:613,54,0	0/0:32,0:32:84.03:0,84,757	0/0:13,0:13:39:0,39,349	0/0:19,1:20:25.63:0,26,485	0/0:34,0:34:81:0,81,730	0/0:28,0:28:72.02:0,72,654	0/0:22,0:22:60.01:0,60,541	0/0:26,1:27:34.71:0,35,564	0/0:23,0:23:63.02:0,63,570	0/0:10,0:10:27.01:0,27,246
chr10	21207945	.	AT	A	16280.61	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=4.160;DP=739;FS=1.546;HRun=8;HaplotypeScore=80.7036;InbreedingCoeff=0.9993;MQ=78.47;MQ0=0;MQRankSum=-6.454;QD=24.78;ReadPosRankSum=8.831;VQSLOD=3.7268;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,22:25:66.10:637,66,0	1/1:2,10:12:27.04:261,27,0	0/0:15,0:15:34.28:0,34,392	0/0:20,0:20:30.09:0,30,473	1/1:3,35:38:90.13:869,90,0	1/1:3,31:34:90.14:869,90,0	1/1:0,20:20:54.09:522,54,0	0/0:47,0:47:99:0,123,1466	1/1:0,18:18:51.08:493,51,0	1/1:1,42:43:99:1182,123,0	1/1:3,17:20:48.07:463,48,0	1/1:4,23:27:66.10:637,66,0	1/1:2,28:30:78.12:753,78,0	1/1:1,23:24:66.11:637,66,0	1/1:2,26:28:69.11:666,69,0	1/1:0,20:20:51.08:493,51,0	1/1:1,15:16:42.06:406,42,0	1/1:2,23:25:66.10:637,66,0	1/1:3,13:16:39.06:376,39,0	1/1:7,36:43:93.12:898,93,0	1/1:2,21:23:63.10:608,63,0	1/1:2,25:27:72.06:686,72,0	1/1:2,18:20:39.05:376,39,0	1/1:1,24:25:72.11:695,72,0	1/1:2,32:34:84.13:811,84,0	1/1:2,31:33:90.10:855,90,0	1/1:3,33:36:90.14:869,90,0	1/1:0,20:20:60.10:579,60,0
chr10	21208792	.	CT	C	18225.51	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=1.838;DP=594;FS=11.774;HRun=3;HaplotypeScore=59.2997;InbreedingCoeff=0.9965;MQ=83.74;MQ0=0;MQRankSum=-7.147;QD=34.13;ReadPosRankSum=6.234;VQSLOD=4.1076;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,31:31:81.25:1003,81,0	1/1:0,6:6:18.06:223,18,0	0/0:13,0:13:39.12:0,39,542	0/0:22,0:22:54.13:0,54,695	1/1:1,15:16:33.10:409,33,0	1/1:0,27:27:66.01:818,66,0	1/1:3,18:21:45.14:558,45,0	0/0:25,0:25:72.24:0,72,1035	1/1:0,21:21:63.20:781,63,0	1/1:0,30:31:90.25:1090,90,0	1/1:0,15:15:45.14:558,45,0	1/1:0,24:24:66.21:818,66,0	1/1:0,17:17:48.15:595,48,0	1/1:0,30:30:87.27:1078,87,0	1/1:1,30:31:84.26:1041,84,0	1/1:1,28:29:78.25:967,78,0	1/1:0,21:21:54.17:669,54,0	1/1:1,10:11:33.10:409,33,0	1/1:1,22:23:66.21:817,66,0	1/1:0,19:19:51.16:632,51,0	1/1:0,19:19:57.18:707,57,0	1/1:2,17:19:51.16:632,51,0	1/1:0,17:17:51.16:628,51,0	1/1:0,24:24:66.21:818,66,0	1/1:0,14:14:42.13:521,42,0	1/1:0,26:26:78.25:966,78,0	1/1:0,33:33:93.29:1153,93,0	1/1:0,9:9:27.08:335,27,0
chr10	21209000	.	G	GT	12699.32	PASS	AB=0.563;AC=49;AF=0.875;AN=56;BaseQRankSum=-3.752;DP=559;FS=3.123;HRun=9;HaplotypeScore=70.8038;InbreedingCoeff=0.8677;MQ=71.37;MQ0=1;MQRankSum=-2.333;QD=25.05;ReadPosRankSum=4.611;VQSLOD=5.4844;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,13:14:36.06:385,36,0	1/1:3,4:7:15.03:157,15,0	0/0:14,0:12:13.77:0,14,104	0/0:15,0:10:17.94:0,18,147	1/1:4,22:26:40.06:656,40,0	1/1:2,18:21:45.12:498,45,0	1/1:1,16:17:42.11:465,42,0	0/0:22,1:23:17.78:0,18,381	1/1:2,17:19:42.11:465,42,0	1/1:5,22:27:63.17:697,63,0	1/1:0,22:22:66.18:730,66,0	1/1:2,17:19:45.12:498,45,0	1/1:4,18:22:34.11:603,34,0	1/1:4,15:19:13.05:372,13,0	1/1:2,20:22:48.13:531,48,0	1/1:2,22:24:34.11:604,34,0	1/1:4,20:24:54.13:588,54,0	1/1:5,21:26:27.90:686,28,0	1/1:8,9:17:32.57:333,33,0	1/1:3,15:19:38.87:387,39,0	1/1:5,9:14:24.06:265,24,0	1/1:1,20:21:57.15:631,57,0	1/1:3,14:16:39.10:429,39,0	1/1:2,16:18:48.13:531,48,0	1/1:4,23:27:57.15:631,57,0	1/1:3,23:28:51.73:718,52,0	1/1:4,23:28:25.40:634,25,0	0/1:2,7:9:1.99:208,0,2
chr10	21209969	.	CCGTAG	C	15784.53	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=3.208;DP=374;FS=3.619;HRun=0;HaplotypeScore=99.5373;InbreedingCoeff=0.8558;MQ=82.67;MQ0=0;MQRankSum=-10.208;QD=49.02;ReadPosRankSum=7.462;VQSLOD=4.8282;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,21:24:30.10:646,30,0	1/1:0,9:9:24.08:535,24,0	0/0:14,0:14:42.12:0,42,1268	0/0:18,0:18:48.15:0,48,1308	1/1:1,20:21:39.09:821,39,0	1/1:0,12:12:27.09:601,27,0	1/1:0,12:12:27.09:601,27,0	0/0:20,0:20:60.21:0,60,1862	1/1:0,8:8:21.07:467,21,0	1/1:3,10:13:33.10:619,33,0	1/1:1,13:14:30.10:669,30,0	1/1:2,8:10:24.08:529,24,0	1/1:1,7:8:21.07:467,21,0	1/1:0,6:6:18.06:401,18,0	1/1:0,10:10:24.08:534,24,0	1/1:1,7:8:18.06:401,18,0	1/1:0,22:22:57.20:1271,57,0	1/1:1,11:12:24.08:534,24,0	1/1:2,12:14:33.07:625,33,0	1/1:0,17:17:33.11:723,33,0	1/1:2,5:7:3.01:67,3,0	1/1:0,8:8:24.08:534,24,0	1/1:0,13:13:17.81:400,18,0	1/1:0,2:2:3.01:67,3,0	1/1:2,32:34:90.31:1895,90,0	1/1:0,24:24:72.25:1582,72,0	1/1:0,10:10:27.09:594,27,0	1/1:0,4:4:9.03:201,9,0
chr10	21210130	.	TCC	T	4336.66	PASS	AB=0.630;AC=42;AF=0.750;AN=56;BaseQRankSum=9.468;DP=367;FS=6.986;HRun=6;HaplotypeScore=123.8490;InbreedingCoeff=0.1777;MQ=64.04;MQ0=0;MQRankSum=-7.827;QD=13.72;ReadPosRankSum=9.125;VQSLOD=0.3195;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:7,9:16:48.34:116,0,48	0/1:2,4:6:22.14:60,0,22	0/0:14,0:14:42.05:0,42,630	0/0:20,0:16:28.74:0,29,434	1/1:0,13:14:29.07:260,29,0	1/1:7,18:26:39.69:444,40,0	0/1:5,10:15:18.66:178,0,19	0/0:17,0:17:12.30:0,12,265	1/1:3,5:9:1.21:127,1,0	1/1:3,10:13:12.87:257,13,0	1/1:1,10:11:26.78:199,27,0	1/1:1,5:6:14.96:118,15,0	1/1:4,13:17:14.72:250,15,0	0/1:7,17:24:10.33:302,0,10	1/1:5,10:15:12.18:223,12,0	1/1:0,4:4:11.98:96,12,0	1/1:4,6:10:17.95:143,18,0	1/1:4,6:10:17.99:156,18,0	1/1:5,4:9:18.36:135,18,0	1/1:6,12:18:11.75:252,12,0	0/1:8,5:13:14.07:53,0,14	0/1:2,6:8:20.02:97,0,20	1/1:1,4:5:11.97:94,12,0	0/1:9,5:14:35.40:52,0,35	0/1:7,18:25:34.44:286,0,34	1/1:6,9:15:16.60:251,17,0	1/1:3,7:10:16.77:136,17,0	1/1:1,2:3:6:52,6,0
chr10	21210137	.	TCCCCC	T	9840.86	PASS	AB=0.649;AC=40;AF=0.714;AN=56;BaseQRankSum=8.249;DP=403;FS=0.473;HRun=6;HaplotypeScore=136.6035;InbreedingCoeff=0.0821;MQ=65.81;MQ0=0;MQRankSum=-9.866;QD=28.20;ReadPosRankSum=9.087;VQSLOD=0.0217;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:7,9:16:23.71:313,0,24	0/1:2,4:6:16.94:150,0,17	0/0:14,0:15:35.30:0,35,1034	0/0:23,0:19:29.49:0,29,629	1/1:3,13:17:44.90:624,45,0	1/1:8,18:26:5.71:875,6,0	0/1:8,10:18:4.71:471,0,5	0/0:15,0:16:6.31:0,6,535	1/1:4,5:10:9.46:313,9,0	1/1:6,10:16:23.93:547,24,0	1/1:3,10:13:28.55:424,29,0	1/1:8,5:13:29.88:355,30,0	1/1:3,13:16:27.28:572,27,0	0/1:9,17:26:5.89:700,0,6	1/1:7,10:17:9.26:494,9,0	1/1:2,4:6:15.45:214,15,0	1/1:6,6:12:15.47:356,15,0	0/1:5,6:11:8.51:281,0,9	0/1:7,5:12:32.75:250,0,33	1/1:7,12:19:6.46:554,6,0	0/1:6,5:11:9.36:196,0,9	0/1:4,6:10:10.14:236,0,10	1/1:3,4:7:12.04:192,12,0	0/1:9,5:14:40.93:152,0,41	0/1:9,18:27:17.99:738,0,18	1/1:5,9:14:15.99:464,16,0	1/1:3,7:10:5.20:270,5,0	1/1:0,2:2:6.02:101,6,0
chr10	21210636	.	A	AC	12462.38	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-5.462;DP=547;FS=0.645;HRun=7;HaplotypeScore=62.6800;InbreedingCoeff=0.9687;MQ=75.09;MQ0=0;MQRankSum=-4.800;QD=25.80;ReadPosRankSum=5.949;VQSLOD=4.9291;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,38:44:76.35:1202,76,0	1/1:0,5:5:12.04:144,12,0	0/0:17,0:17:32.82:0,33,282	0/0:20,0:18:13.15:0,13,170	1/1:3,22:25:66.20:786,66,0	1/1:0,18:18:45.14:543,45,0	1/1:3,22:25:48.15:580,48,0	0/0:27,0:27:51.06:0,51,488	1/1:1,23:24:57.17:688,57,0	1/1:0,0:6:16.95:90,17,0	1/1:4,0:13:19.92:98,20,0	1/1:2,16:18:39.12:471,39,0	1/1:3,11:14:27.08:326,27,0	1/1:1,12:13:33.10:399,33,0	1/1:2,22:24:51.16:616,51,0	1/1:0,14:14:36.11:435,36,0	1/1:5,1:37:74.78:385,75,0	1/1:0,19:19:51.16:616,51,0	1/1:2,0:15:34.94:176,35,0	1/1:1,17:18:48.15:576,48,0	1/1:2,21:23:51.16:616,51,0	1/1:2,16:18:45.14:541,45,0	1/1:2,16:18:38.91:470,39,0	1/1:1,23:24:66.20:797,66,0	1/1:3,16:19:45.14:544,45,0	1/1:2,15:17:45.07:502,45,0	1/1:3,21:25:57.17:681,57,0	1/1:1,6:7:15.05:181,15,0
chr10	21211911	.	CA	C	11410.50	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-4.742;DP=573;FS=0.577;HRun=8;HaplotypeScore=75.7124;InbreedingCoeff=0.9934;MQ=71.82;MQ0=0;MQRankSum=-7.822;QD=22.42;ReadPosRankSum=7.754;VQSLOD=4.1708;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,26:30:66.10:635,66,0	1/1:1,9:10:23.95:232,24,0	0/0:20,0:19:35.75:0,36,423	0/0:18,0:17:39.95:0,40,407	1/1:2,28:30:84.12:808,84,0	1/1:0,18:18:41.96:405,42,0	1/1:2,13:15:30.04:290,30,0	0/0:3,0:23:49.66:0,50,258	1/1:2,17:19:39.06:377,39,0	1/1:1,23:24:69.11:665,69,0	1/1:4,24:28:68.31:642,68,0	1/1:3,12:15:24.04:232,24,0	1/1:1,24:25:66:637,66,0	1/1:1,15:16:36.06:348,36,0	1/1:2,19:21:45.07:433,45,0	1/1:4,14:18:27.04:261,27,0	1/1:3,21:24:42.01:391,42,0	1/1:3,10:13:24.03:232,24,0	1/1:2,25:27:75.10:714,75,0	1/1:1,29:30:87.14:838,87,0	1/1:0,19:19:45.07:435,45,0	1/1:1,9:10:24.04:232,24,0	1/1:2,19:21:45.07:434,45,0	1/1:4,9:13:18.02:174,18,0	1/1:1,16:17:36.06:348,36,0	1/1:1,20:21:60.09:579,60,0	1/1:4,26:30:68.60:666,69,0	1/1:1,14:15:42.06:406,42,0
chr10	21212243	.	T	TC	6730.22	PASS	AB=0.765;AC=41;AF=0.732;AN=56;BaseQRankSum=-3.204;DP=471;FS=24.533;HRun=0;HaplotypeScore=80.2390;InbreedingCoeff=0.7196;MQ=88.94;MQ0=0;MQRankSum=-2.005;QD=19.17;ReadPosRankSum=4.367;VQSLOD=4.1377;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:8,17:25:5.45:279,0,5	0/1:4,3:7:4.88:88,0,5	0/0:27,0:27:52.74:0,53,809	0/0:11,0:11:29.83:0,30,375	1/1:2,13:15:30.47:316,30,0	1/1:3,18:22:30.83:529,31,0	1/1:0,14:14:36.09:394,36,0	0/0:27,0:27:67.49:0,67,767	1/1:0,16:16:33.05:357,33,0	0/0:11,0:11:18.90:0,19,124	0/0:16,0:16:18.83:0,19,185	1/1:2,14:16:2.82:334,3,0	1/1:5,8:13:10.20:256,10,0	1/1:0,19:19:45.13:507,45,0	1/1:1,19:20:43.75:505,44,0	1/1:7,18:25:17.31:436,17,0	0/1:18,0:18:1.43:1,0,183	1/1:4,3:7:8.88:93,9,0	0/0:28,0:28:75.93:0,76,387	1/1:7,16:23:9.68:431,10,0	1/1:5,9:14:25.46:273,25,0	1/1:1,0:8:10.90:49,11,0	1/1:2,6:8:10.76:122,11,0	1/1:5,14:19:51.14:570,51,0	1/1:2,8:11:5.37:159,5,0	1/1:8,10:18:23.89:356,24,0	1/1:6,18:24:27.60:474,28,0	1/1:5,4:9:18.83:201,19,0
chr10	21212244	.	T	TCC	5149.92	PASS	AB=1.000;AC=42;AF=0.750;AN=56;BaseQRankSum=6.712;DP=470;FS=22.928;HRun=8;HaplotypeScore=98.6300;InbreedingCoeff=0.7517;MQ=87.96;MQ0=0;MQRankSum=-4.084;QD=14.15;ReadPosRankSum=-0.447;VQSLOD=1.3129;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:24:9.33:178,0,9	0/1:7,0:7:11.50:52,0,11	0/0:25,0:26:46.07:0,46,452	0/0:11,0:11:20.60:0,21,196	1/1:16,0:16:26.47:187,26,0	1/1:22,0:22:25.51:337,26,0	1/1:15,0:15:38.48:277,38,0	1/1:4,21:28:64.93:738,65,0	1/1:15,0:15:32.28:214,32,0	0/0:11,0:11:26.72:0,27,191	0/0:14,0:14:38.81:0,39,293	1/1:16,0:16:12.32:211,12,0	1/1:13,0:13:3.27:137,3,0	1/1:19,0:19:44.62:322,45,0	1/1:19,0:19:44.37:323,44,0	1/1:25,0:25:24.12:289,24,0	0/0:16,0:16:20.23:0,20,298	1/1:7,0:7:8.98:73,9,0	0/0:28,0:28:75.85:0,76,557	1/1:22,0:22:6.47:241,6,0	1/1:14,0:14:23.57:160,24,0	1/1:10,0:10:15.05:238,15,0	1/1:8,0:8:11.39:71,11,0	1/1:19,0:19:50.68:374,51,0	1/1:11,0:11:14.93:113,15,0	1/1:18,0:18:29.81:221,30,0	1/1:24,0:24:24.80:272,25,0	1/1:12,0:12:17.71:122,18,0
chr10	21212428	.	CTT	C	7999.51	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-4.336;DP=432;FS=2.204;HRun=12;HaplotypeScore=73.3845;InbreedingCoeff=0.8585;MQ=74.37;MQ0=1;MQRankSum=-2.099;QD=21.92;ReadPosRankSum=7.188;VQSLOD=4.3436;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:2,16:18:39.08:397,39,0	1/1:0,3:4:11.76:103,12,0	0/0:16,0:13:16.69:0,17,290	0/0:20,0:18:12.28:0,12,160	1/1:6,3:9:5.98:61,6,0	1/1:2,13:16:38.82:378,39,0	1/1:3,14:18:32.79:388,33,0	0/0:14,0:30:63.12:0,63,683	1/1:3,7:11:14.73:205,15,0	1/1:3,20:23:60.12:610,60,0	1/1:1,11:12:33.07:336,33,0	1/1:4,8:12:21.02:214,21,0	1/1:0,11:12:32.81:317,33,0	1/1:3,10:16:32.27:280,32,0	1/1:2,13:16:38.56:359,39,0	1/1:2,18:20:54.11:549,54,0	1/1:6,23:29:57.10:580,57,0	1/1:3,2:6:11.75:99,12,0	1/1:5,12:17:39.05:395,39,0	1/1:0,8:8:18.04:183,18,0	1/1:3,6:9:15.02:152,15,0	1/1:2,12:14:29.60:304,30,0	1/1:3,13:16:30.05:305,30,0	1/1:2,12:16:41.56:390,42,0	1/1:2,7:10:23.77:225,24,0	1/1:3,18:22:53.80:517,54,0	1/1:3,23:27:62.87:622,63,0	1/1:1,1:2:3:30,3,0
chr10	21212465	.	A	AACACAC	4429.21	PASS	AB=1.000;AC=47;AF=0.979;AN=48;BaseQRankSum=-2.294;DP=508;FS=0.000;HRun=0;HaplotypeScore=183.6381;InbreedingCoeff=0.0313;MQ=61.84;MQ0=13;MQRankSum=1.108;QD=10.86;ReadPosRankSum=2.325;VQSLOD=4.0080;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:20:3:29,3,0	1/1:2,0:2:2.98:22,3,0	./.	./.	0/1:6,0:6:0:0,0,0	1/1:18,0:17:6.01:112,6,0	1/1:29,0:27:8.45:246,8,0	1/1:20,0:20:10.28:216,10,0	1/1:17,0:17:8.43:239,8,0	1/1:23,0:24:23.44:432,23,0	1/1:17,1:18:20.87:389,21,0	1/1:17,0:17:6.02:158,6,0	1/1:16,0:16:7.58:136,8,0	1/1:13,0:12:2.99:24,3,0	1/1:29,0:28:11.04:140,11,0	1/1:26,0:26:8.89:86,9,0	1/1:24,4:30:35.89:839,36,0	1/1:4,0:4:6.02:118,6,0	1/1:20,1:20:11.98:332,12,0	1/1:18,0:17:6.02:137,6,0	./.	1/1:12,0:12:3.01:46,3,0	./.	1/1:12,0:12:2.91:78,3,0	1/1:12,0:12:2.96:19,3,0	1/1:19,0:17:21.07:430,21,0	1/1:19,0:18:6.02:155,6,0	1/1:3,0:3:3.01:44,3,0
chr10	21212713	.	GC	G	15184.17	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=10.678;DP=493;FS=2.765;HRun=1;HaplotypeScore=207.5089;InbreedingCoeff=0.8881;MQ=84.31;MQ0=0;MQRankSum=-13.313;QD=36.50;ReadPosRankSum=7.352;VQSLOD=3.8082;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,41:42:99:1553,114,0	1/1:1,1:2:5.99:64,6,0	0/0:22,0:22:66.21:0,66,1018	0/0:25,0:25:71.79:0,72,1000	1/1:1,6:7:12.04:167,12,0	1/1:0,17:17:45.15:618,45,0	1/1:0,22:22:60.20:830,60,0	0/0:30,0:30:90.28:0,90,1365	1/1:0,19:19:51.17:709,51,0	1/1:0,16:16:48.11:646,48,0	1/1:0,4:4:9.03:125,9,0	1/1:0,24:24:69.23:950,69,0	1/1:0,19:19:57.19:792,57,0	1/1:0,17:17:51.17:709,51,0	1/1:0,32:32:81.23:1101,81,0	1/1:0,37:37:99:1431,105,0	1/1:1,20:21:57.19:777,57,0	1/1:0,6:6:18.06:251,18,0	1/1:0,16:16:45.15:616,45,0	1/1:0,10:10:24.08:327,24,0	1/1:0,13:13:27.09:375,27,0	1/1:0,12:12:24.08:332,24,0	1/1:0,7:7:12.04:167,12,0	1/1:0,16:16:32.86:453,33,0	1/1:0,12:12:33.11:452,33,0	1/1:0,26:26:72.24:989,72,0	1/1:1,16:17:48.16:668,48,0	1/1:0,2:2:6.02:84,6,0
chr10	21212721	.	CTGTTA	C	19026.24	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=12.626;DP=382;FS=0.471;HRun=0;HaplotypeScore=195.6162;InbreedingCoeff=0.8455;MQ=93.24;MQ0=0;MQRankSum=-13.138;QD=63.00;ReadPosRankSum=9.971;VQSLOD=4.8013;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,27:28:84.29:1886,84,0	1/1:0,1:1:3.01:67,3,0	0/0:24,0:24:64:0,64,1880	0/0:23,0:23:63.30:0,63,1859	1/1:0,3:3:9.03:200,9,0	1/1:0,11:11:33.11:731,33,0	1/1:1,16:17:48.16:1072,48,0	0/0:33,0:33:96.32:0,96,3055	1/1:0,13:13:39.13:872,39,0	1/1:1,14:15:45.15:967,45,0	1/1:2,2:4:9:157,9,0	1/1:1,20:21:60.21:1339,60,0	1/1:0,16:16:48.16:1075,48,0	1/1:1,13:14:42.13:896,42,0	1/1:0,22:22:66.23:1475,66,0	1/1:1,28:29:87.28:1904,87,0	1/1:0,10:10:30.10:668,30,0	1/1:0,5:5:15.05:332,15,0	1/1:0,8:8:21.07:466,21,0	1/1:1,6:7:18.06:402,18,0	1/1:1,7:9:24.08:517,24,0	1/1:0,9:9:24:487,24,0	1/1:0,3:3:9.03:200,9,0	1/1:1,11:12:26.94:512,27,0	1/1:1,7:8:24.05:490,24,0	1/1:2,20:22:63.20:1354,63,0	1/1:0,13:13:39.13:873,39,0	1/1:1,1:2:5.95:85,6,0
chr10	21213069	.	A	AG	9232.59	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=10.277;DP=441;FS=7.270;HRun=0;HaplotypeScore=184.7546;InbreedingCoeff=0.9720;MQ=67.81;MQ0=0;MQRankSum=-10.816;QD=24.30;ReadPosRankSum=4.680;VQSLOD=4.4084;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,21:24:64.92:534,65,0	1/1:0,5:5:15.01:137,15,0	0/0:10,0:10:27.08:0,27,353	0/0:18,0:18:36.26:0,36,478	1/1:2,8:10:28.67:227,29,0	1/1:2,12:14:41.98:373,42,0	1/1:2,18:20:54.55:474,55,0	0/0:33,0:33:96.30:0,96,1302	1/1:0,17:17:50.24:416,50,0	1/1:0,15:17:51.08:509,51,0	1/1:1,10:11:27.68:181,28,0	1/1:2,19:21:62.69:543,63,0	1/1:1,10:11:32.69:284,33,0	1/1:0,24:24:70.73:575,71,0	1/1:5,20:25:73.98:676,74,0	1/1:3,11:14:41.60:378,42,0	1/1:2,11:13:33.18:313,33,0	1/1:1,10:11:32.50:289,32,0	1/1:0,17:19:57.11:583,57,0	1/1:0,9:9:26.70:231,27,0	1/1:2,6:8:17.43:133,17,0	1/1:1,17:18:49.43:375,49,0	1/1:0,5:7:14.18:99,14,0	1/1:2,23:25:49.89:379,50,0	1/1:3,14:17:50.09:430,50,0	1/1:1,13:14:42.09:421,42,0	1/1:7,15:21:59.62:557,60,0	1/1:0,4:4:12.02:117,12,0
chr10	21213071	.	ATATT	A	14390.36	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=10.426;DP=434;FS=6.934;HRun=0;HaplotypeScore=187.6983;InbreedingCoeff=0.9717;MQ=65.68;MQ0=0;MQRankSum=-11.379;QD=38.89;ReadPosRankSum=6.328;VQSLOD=4.4225;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,21:25:69.17:938,69,0	1/1:0,5:5:15.05:209,15,0	0/0:11,0:11:33.11:0,33,681	0/0:16,0:16:20:0,20,830	1/1:1,8:9:24.05:359,24,0	1/1:1,12:13:39.13:557,39,0	1/1:1,18:19:54.14:737,54,0	0/0:37,0:37:99:0,108,2816	1/1:0,17:17:51.17:701,51,0	1/1:2,15:17:45.15:672,45,0	1/1:1,10:11:30.10:462,30,0	1/1:1,19:20:58.74:796,59,0	1/1:1,10:11:30.07:418,30,0	1/1:1,24:25:75.25:1066,75,0	1/1:4,20:24:63.15:904,63,0	1/1:2,12:14:39.10:534,39,0	1/1:0,11:11:33.10:443,33,0	1/1:1,10:11:33.11:503,33,0	1/1:2,17:19:51.15:757,51,0	1/1:0,9:9:27.09:388,27,0	1/1:3,6:9:18.06:252,18,0	1/1:0,17:17:48.16:673,48,0	1/1:2,5:7:15.05:227,15,0	1/1:1,23:24:50.27:707,50,0	1/1:2,14:16:46.71:651,47,0	1/1:1,13:14:42.14:614,42,0	1/1:2,15:19:48.09:648,48,0	1/1:0,4:4:12.04:174,12,0
chr10	21213073	.	AT	A	5101.66	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=10.465;DP=428;FS=3.406;HRun=4;HaplotypeScore=197.8196;InbreedingCoeff=0.9656;MQ=66.52;MQ0=0;MQRankSum=-10.856;QD=14.05;ReadPosRankSum=5.443;VQSLOD=3.6515;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:23,2:25:58.69:336,59,0	1/1:5,0:5:13.72:60,14,0	0/0:12,0:12:24:0,24,284	0/0:17,0:17:40.16:0,40,459	1/1:8,1:9:22.75:158,23,0	1/1:12,1:13:35.94:175,36,0	1/1:18,0:18:50.46:301,50,0	0/0:36,0:36:99:0,102,1425	1/1:17,0:17:47.45:269,47,0	1/1:18,0:18:44.16:203,44,0	1/1:10,1:11:29.02:239,29,0	1/1:20,0:20:52.34:249,52,0	1/1:11,0:11:27.71:142,28,0	1/1:24,1:25:69.93:402,70,0	1/1:20,1:21:58.69:334,59,0	1/1:13,0:13:33.20:165,33,0	1/1:11,0:11:29.80:131,30,0	1/1:10,1:11:30.98:194,31,0	1/1:19,0:19:46.66:203,47,0	1/1:9,0:9:24.96:129,25,0	1/1:6,2:8:16.99:115,17,0	1/1:17,0:17:44.97:276,45,0	1/1:7,0:7:14.25:101,14,0	1/1:23,1:24:47.71:292,48,0	1/1:15,1:16:41.70:222,42,0	1/1:14,0:14:36.15:156,36,0	1/1:17,0:16:44.12:200,44,0	1/1:4,0:4:10.98:48,11,0
chr10	21214610	.	T	TTTCC	21384.41	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-5.776;DP=715;FS=0.000;HRun=0;HaplotypeScore=105.4296;InbreedingCoeff=0.9328;MQ=55.56;MQ0=14;MQRankSum=5.579;QD=34.77;ReadPosRankSum=7.346;VQSLOD=4.4222;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,21:22:38.80:933,39,0	1/1:0,9:9:8.94:179,9,0	0/0:39,0:10:20.94:0,21,212	0/0:18,0:5:12:0,12,134	1/1:1,25:28:68.93:1238,69,0	1/1:0,22:25:27.09:718,27,0	1/1:2,17:19:21.05:515,21,0	0/0:43,0:36:96.89:0,97,1057	1/1:1,19:22:21.05:552,21,0	1/1:1,33:36:98.86:1544,99,0	1/1:1,29:30:68.39:1238,68,0	1/1:0,30:33:48.08:1281,48,0	1/1:1,24:25:27.07:705,27,0	1/1:1,27:29:30.08:794,30,0	1/1:1,19:22:27.09:680,27,0	1/1:0,32:32:24.08:646,24,0	1/1:1,22:24:27.02:655,27,0	1/1:3,15:19:26.91:620,27,0	1/1:6,23:27:74.96:1121,75,0	1/1:0,35:36:95.77:1800,96,0	1/1:1,16:18:18.04:485,18,0	1/1:1,20:21:41.75:781,42,0	1/1:1,19:22:15.05:344,15,0	1/1:0,19:19:24.08:637,24,0	1/1:3,23:26:42.11:1090,42,0	1/1:0,31:31:87.10:1753,87,0	1/1:3,27:30:33.01:870,33,0	1/1:1,6:8:9.03:208,9,0
chr10	21214886	.	TC	T	11575.94	PASS	AB=0.944;AC=52;AF=0.929;AN=56;BaseQRankSum=-2.795;DP=578;FS=3.017;HRun=10;HaplotypeScore=102.6957;InbreedingCoeff=0.4247;MQ=69.84;MQ0=0;MQRankSum=-3.515;QD=20.42;ReadPosRankSum=2.670;VQSLOD=5.1615;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,28:36:74.95:651,75,0	1/1:2,8:10:20.99:182,21,0	0/0:11,0:11:10.61:0,11,79	0/1:13,0:12:30.04:30,0,48	1/1:1,27:28:71.99:624,72,0	1/1:4,17:21:47.91:417,48,0	1/1:2,18:20:41.99:365,42,0	0/1:12,2:15:16.97:43,0,17	1/1:3,12:15:35.99:312,36,0	1/1:2,19:21:50.99:442,51,0	1/1:3,29:32:83.96:728,84,0	1/1:3,29:32:80.96:703,81,0	1/1:1,22:23:65.99:573,66,0	1/1:2,22:24:65.98:573,66,0	1/1:2,15:17:44.96:390,45,0	1/1:3,26:29:68.98:599,69,0	1/1:1,18:19:47.99:417,48,0	1/1:1,6:7:17.99:156,18,0	1/1:4,17:21:50.97:442,51,0	1/1:4,20:24:53.98:468,54,0	1/1:3,11:14:32.97:286,33,0	1/1:0,12:12:26.98:234,27,0	1/1:3,18:21:44.96:391,45,0	1/1:4,20:24:53.94:468,54,0	1/1:1,25:26:71.98:625,72,0	1/1:1,27:28:80.95:703,81,0	1/1:4,25:29:71.98:625,72,0	1/1:0,5:5:15:130,15,0
chr10	21215137	.	AAGGAAGGAGGAG	A	5259.66	PASS	AB=1.000;AC=26;AF=0.464;AN=56;BaseQRankSum=-6.892;DP=533;FS=2.447;HRun=0;HaplotypeScore=239.3073;InbreedingCoeff=-0.1650;MQ=60.73;MQ0=9;MQRankSum=-10.622;QD=13.38;ReadPosRankSum=-8.029;VQSLOD=1.6614;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:23:40.95:41,0,482	0/1:4,0:4:15.83:16,0,66	0/0:21,0:14:16.47:0,16,933	0/0:37,0:21:17.98:0,18,850	1/1:18,0:18:40.53:380,41,0	0/1:30,0:30:99:107,0,1076	0/0:22,0:22:2.70:0,3,466	0/0:25,0:25:60.20:0,60,2549	0/1:23,0:23:68.51:69,0,752	1/1:2,20:22:45.10:1431,45,0	1/1:1,10:11:33.11:1059,33,0	0/1:18,0:16:58.33:58,0,631	0/1:23,0:22:99:196,0,551	0/1:20,0:20:99:211,0,523	0/1:30,0:30:99:166,0,1013	0/1:29,0:28:99:178,0,992	1/1:2,9:11:9.03:289,9,0	0/0:15,0:15:12.42:0,12,386	1/1:5,2:6:15.05:433,15,0	0/1:15,0:15:99:146,0,471	0/1:19,0:19:99:121,0,320	0/1:6,0:6:71.19:71,0,229	0/1:17,0:17:99:157,0,440	0/1:20,0:20:20.99:21,0,558	0/0:15,0:15:40.93:0,41,692	0/1:23,0:23:99:107,0,784	0/1:24,0:24:2.52:3,0,748	0/0:5,0:5:15.05:0,15,309
chr10	21215141	.	AAGGAGGAG	A	6043.47	PASS	AB=0.995;AC=30;AF=0.536;AN=56;BaseQRankSum=-5.074;DP=522;FS=0.389;HRun=0;HaplotypeScore=196.7434;InbreedingCoeff=-0.3016;MQ=60.69;MQ0=9;MQRankSum=-11.178;QD=13.93;ReadPosRankSum=-9.542;VQSLOD=1.1388;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:22:48.61:97,0,49	1/1:4,0:4:2.37:87,2,0	0/0:22,0:13:27.42:0,27,748	0/0:38,0:22:19.63:0,20,844	1/1:6,12:18:48.16:1116,48,0	0/1:31,0:31:99:227,0,108	0/1:20,1:21:42.27:113,0,42	0/0:23,0:23:60.20:0,60,1979	0/1:21,0:21:82.89:87,0,83	1/1:21,0:21:45.11:848,45,0	1/1:11,0:11:33.11:650,33,0	0/1:16,0:14:63.99:64,0,67	0/1:22,0:21:46:273,0,46	0/1:20,1:21:37.31:345,0,37	0/1:29,0:29:84.43:246,0,84	0/1:28,0:27:99:210,0,103	1/1:10,0:10:9.03:173,9,0	0/1:13,0:13:16.46:16,0,52	1/1:8,0:7:18.06:390,18,0	0/1:15,0:15:40.64:197,0,41	0/1:18,0:18:26.62:144,0,27	0/1:6,0:6:20.58:73,0,21	0/1:17,0:17:28.40:303,0,28	0/1:20,0:20:34.60:35,0,57	0/1:15,0:15:2.94:3,0,82	0/1:22,0:22:76.70:229,0,77	0/1:25,0:25:77.13:117,0,77	0/0:5,0:5:12.48:0,12,46
chr10	21215145	.	AGGAG	A	20064.59	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=5.751;DP=516;FS=2.665;HRun=0;HaplotypeScore=117.2320;InbreedingCoeff=0.9603;MQ=62.25;MQ0=8;MQRankSum=-3.889;QD=46.88;ReadPosRankSum=6.873;VQSLOD=5.3905;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,19:20:36.40:799,36,0	1/1:0,4:4:12.04:236,12,0	0/0:20,0:11:27.25:0,27,638	0/0:43,0:26:20.15:0,20,790	1/1:14,4:18:48.16:728,48,0	1/1:0,30:30:75.26:1527,75,0	1/1:1,20:21:36.12:715,36,0	0/0:24,0:24:72.24:0,72,1789	1/1:2,17:19:51.18:1053,51,0	1/1:21,0:21:45.07:570,45,0	1/1:11,1:12:36.11:492,36,0	1/1:4,13:15:42.14:826,42,0	1/1:1,20:20:51.18:1026,51,0	1/1:7,13:20:54.17:999,54,0	1/1:7,21:28:78.22:1541,78,0	1/1:2,26:27:72.25:1484,72,0	1/1:9,1:10:9.03:117,9,0	1/1:3,10:13:25.01:527,25,0	1/1:4,2:6:18.06:301,18,0	1/1:2,12:14:39.13:775,39,0	1/1:0,17:17:35.68:699,36,0	1/1:1,6:7:18.06:341,18,0	1/1:1,15:16:48.16:948,48,0	1/1:1,18:19:35.92:748,36,0	1/1:2,13:15:45.11:900,45,0	1/1:3,16:19:54.19:1117,54,0	1/1:1,23:24:57.13:1137,57,0	1/1:4,5:9:27.07:459,27,0
chr10	21215148	.	AG	A	4946.49	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=8.138;DP=526;FS=3.988;HRun=2;HaplotypeScore=147.9771;InbreedingCoeff=0.9493;MQ=62.10;MQ0=8;MQRankSum=-4.442;QD=11.56;ReadPosRankSum=8.772;VQSLOD=2.9389;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:20:37.26:180,37,0	1/1:4,0:4:10.93:52,11,0	0/0:24,0:14:32.17:0,32,540	0/0:46,0:29:54.04:0,54,675	1/1:19,0:19:45.49:245,45,0	1/1:30,0:30:70.69:359,71,0	1/1:21,0:21:33.71:161,34,0	0/0:28,0:28:84.27:0,84,1274	1/1:20,0:20:47.60:239,48,0	1/1:20,1:21:34.84:141,35,0	1/1:11,1:12:31.25:147,31,0	1/1:15,2:15:37.13:205,37,0	1/1:20,1:20:48.22:240,48,0	1/1:18,1:19:48.69:304,49,0	1/1:26,1:27:68.62:338,69,0	1/1:26,2:27:68.28:346,68,0	1/1:10,0:10:7.49:26,7,0	1/1:11,2:13:28.53:144,29,0	1/1:5,1:6:16.71:90,17,0	1/1:14,0:14:36.19:168,36,0	1/1:17,0:17:33.65:162,34,0	1/1:6,1:7:15.41:69,15,0	1/1:15,1:16:45.15:227,45,0	1/1:18,1:19:34.22:174,34,0	1/1:14,1:15:42.89:226,43,0	1/1:19,0:19:51.49:270,51,0	1/1:24,0:24:45.88:242,46,0	1/1:6,3:9:24.79:195,25,0
chr10	21215210	.	G	GAGAGAAGAGAAGAAA	40498.91	PASS	AB=0.913;AC=49;AF=0.875;AN=56;BaseQRankSum=-3.194;DP=678;FS=3.613;HRun=0;HaplotypeScore=212.2151;InbreedingCoeff=0.7891;MQ=58.19;MQ0=17;MQRankSum=-7.333;QD=74.17;ReadPosRankSum=4.975;VQSLOD=4.5546;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:23,4:27:51.09:2133,51,0	1/1:6,2:7:21.07:640,21,0	0/0:50,0:24:50.01:0,50,836	0/0:51,0:24:7.30:0,7,203	1/1:7,15:26:51.14:2611,51,0	1/1:24,8:32:75.21:3003,75,0	1/1:17,0:16:42.14:835,42,0	0/0:30,0:30:66.16:0,66,1161	1/1:5,14:25:24.05:1545,24,0	1/1:27,1:27:60.14:1792,60,0	1/1:8,9:26:32.88:1108,33,0	1/1:4,13:24:33.11:1885,33,0	1/1:15,6:21:54.15:2137,54,0	1/1:7,13:24:39.13:2240,39,0	1/1:8,9:31:24.04:1191,24,0	1/1:12,5:17:45.05:1778,45,0	1/1:11,4:15:33.05:1083,33,0	1/1:8,1:9:21.06:732,21,0	1/1:5,9:18:47.19:1652,47,0	1/1:6,12:26:38.96:1531,39,0	1/1:5,0:5:9:89,9,0	1/1:5,7:18:18.02:778,18,0	1/1:7,12:28:33.03:1639,33,0	0/1:19,2:21:15.79:962,0,16	1/1:8,11:27:30.05:1610,30,0	1/1:2,13:22:63.18:3251,63,0	1/1:22,7:29:66.15:2838,66,0	1/1:6,6:13:27.09:1436,27,0
chr10	21216118	.	GA	G	394.15	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.656;DP=588;FS=2.770;HRun=8;HaplotypeScore=93.8054;InbreedingCoeff=0.9419;MQ=76.62;MQ0=7;MQRankSum=-2.850;QD=14.60;ReadPosRankSum=-2.853;VQSLOD=3.2800;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,120,1438	0/0:15,0:15:35.13:0,35,393	0/0:42,0:23:44.20:0,44,436	0/0:38,0:25:28.21:0,28,304	0/0:29,0:29:72.20:0,72,847	0/0:20,0:20:57.17:0,57,681	0/0:17,0:17:48.14:0,48,574	1/1:15,12:27:59.69:489,60,0	0/0:16,0:16:42.11:0,42,486	0/0:19,0:19:51.15:0,51,609	0/0:8,0:8:24.07:0,24,289	0/0:12,0:12:33.09:0,33,388	0/0:22,1:23:31.18:0,31,632	0/0:17,0:17:51.12:0,51,591	0/0:19,0:19:51.14:0,51,596	0/0:16,0:16:45.13:0,45,532	0/0:27,0:27:69.14:0,69,793	0/0:21,0:21:57.16:0,57,667	0/0:18,0:18:45.09:0,45,515	0/0:18,0:18:54.15:0,54,633	0/0:22,0:22:63.17:0,63,738	0/0:20,0:20:57.09:0,57,624	0/0:16,0:16:42.12:0,42,498	0/0:17,0:17:45.14:0,45,542	0/0:17,0:17:51.14:0,51,602	0/0:27,0:27:72.19:0,72,841	0/0:17,0:17:45.14:0,45,544	0/0:5,0:5:9.03:0,9,106
chr10	21216247	.	TA	T	7790.65	PASS	AB=0.767;AC=42;AF=0.750;AN=56;BaseQRankSum=-11.646;DP=548;FS=2.576;HRun=11;HaplotypeScore=65.7090;InbreedingCoeff=0.7652;MQ=70.06;MQ0=1;MQRankSum=-0.057;QD=18.25;ReadPosRankSum=5.963;VQSLOD=5.5108;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:3,29:34:84.98:677,85,0	1/1:4,7:11:14.97:123,15,0	0/0:13,0:10:0.42:0,0,72	0/1:8,0:8:21.50:29,0,22	1/1:1,24:25:62.81:510,63,0	1/1:0,24:24:56.94:468,57,0	1/1:4,12:16:26.95:221,27,0	0/0:4,0:25:57.21:0,57,304	1/1:2,16:18:41.95:345,42,0	0/0:9,0:25:48.57:0,49,256	0/0:6,1:21:27.04:0,27,249	1/1:1,13:14:38.95:320,39,0	1/1:1,16:17:47.94:394,48,0	1/1:3,14:17:41.93:345,42,0	1/1:4,21:26:37.76:450,38,0	1/1:6,13:19:32.95:271,33,0	0/0:9,0:29:57.20:0,57,313	1/1:4,26:30:74.88:616,75,0	0/0:1,0:8:22.96:0,23,132	1/1:6,22:29:32.97:466,33,0	1/1:1,13:14:32.96:271,33,0	1/1:1,21:22:59.92:493,60,0	1/1:4,14:19:37.99:302,38,0	1/1:3,17:20:47.92:394,48,0	1/1:3,15:19:40.99:326,41,0	1/1:6,12:18:32.94:271,33,0	1/1:0,18:18:44.95:369,45,0	0/1:1,6:8:8.97:131,0,9
chr10	21216618	.	G	GA	19069.54	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-3.707;DP=709;FS=2.324;HRun=7;HaplotypeScore=92.8041;InbreedingCoeff=0.9749;MQ=80.80;MQ0=0;MQRankSum=-7.961;QD=28.38;ReadPosRankSum=5.028;VQSLOD=4.9146;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,43:51:99:1486,123,0	1/1:4,6:10:15.05:181,15,0	0/0:24,0:25:51.24:0,51,512	0/0:12,0:12:23.17:0,23,243	1/1:3,16:19:44.99:492,45,0	1/1:3,13:16:36.11:435,36,0	1/1:3,23:26:34.22:696,34,0	1/1:3,1:38:92.50:490,92,0	1/1:2,26:28:72.22:870,72,0	1/1:3,26:29:78.24:941,78,0	1/1:4,21:25:60.18:725,60,0	1/1:3,19:22:57.17:686,57,0	1/1:5,18:23:48.15:580,48,0	1/1:3,27:30:72.22:870,72,0	1/1:3,19:22:54.17:652,54,0	1/1:2,28:30:84.26:1015,84,0	1/1:5,35:40:76.36:1203,76,0	1/1:1,24:25:66.16:781,66,0	1/1:5,13:18:39.09:448,39,0	1/1:3,27:30:78.24:942,78,0	1/1:5,29:34:75.23:904,75,0	1/1:3,25:28:69.17:814,69,0	1/1:1,13:14:39.12:471,39,0	1/1:0,36:36:90.28:1087,90,0	1/1:3,16:19:45.14:544,45,0	1/1:4,27:31:81.25:978,81,0	1/1:4,20:23:54.11:634,54,0	1/1:0,4:4:12.04:145,12,0
chr10	21218134	.	GA	G	13194.14	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-0.762;DP=594;FS=4.485;HRun=9;HaplotypeScore=79.5054;InbreedingCoeff=0.9826;MQ=75.78;MQ0=0;MQRankSum=-6.297;QD=23.15;ReadPosRankSum=5.040;VQSLOD=5.4688;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,24:26:66.03:604,66,0	1/1:4,12:16:33.01:302,33,0	0/0:11,0:11:26.80:0,27,311	0/0:13,0:13:27.03:0,27,285	1/1:2,16:18:48.03:439,48,0	1/1:2,28:30:78.04:714,78,0	1/1:2,15:17:39.02:357,39,0	1/1:2,21:23:63:567,63,0	1/1:3,15:18:36.02:330,36,0	1/1:1,21:22:63.02:572,63,0	1/1:4,21:25:63.03:577,63,0	1/1:1,26:27:75.04:686,75,0	1/1:6,11:17:30:275,30,0	1/1:4,28:32:69.02:632,69,0	1/1:2,23:25:69.04:632,69,0	1/1:2,24:26:66.03:604,66,0	1/1:2,16:18:45.02:412,45,0	1/1:0,15:15:45.02:412,45,0	1/1:2,27:29:67.02:724,67,0	1/1:2,15:17:45.02:412,45,0	1/1:1,17:18:42.02:384,42,0	1/1:0,25:25:69.03:632,69,0	1/1:2,18:20:54.02:494,54,0	1/1:2,20:22:51.03:467,51,0	1/1:0,24:24:60.03:549,60,0	1/1:3,23:26:66:594,66,0	1/1:4,26:30:78.04:714,78,0	1/1:0,4:4:12.01:110,12,0
chr10	21218738	.	CAGAGAGAGAGAG	C	2075.09	PASS	AB=0.761;AC=26;AF=0.591;AN=44;BaseQRankSum=-0.008;DP=496;FS=59.079;HRun=0;HaplotypeScore=161.4251;InbreedingCoeff=0.3196;MQ=38.77;MQ0=50;MQRankSum=-1.812;QD=6.92;ReadPosRankSum=2.327;VQSLOD=0.7946;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,7:28:0:0,0,0	./.	./.	./.	./.	1/1:15,9:25:4.01:157,4,0	1/1:12,7:15:7.73:181,8,0	0/0:20,0:17:15.05:0,15,375	1/1:9,6:12:6.02:114,6,0	0/1:4,0:11:11.14:11,0,69	0/1:16,0:20:0.07:0,0,0	1/1:11,6:18:9.02:292,9,0	1/1:13,9:20:2.36:99,2,0	1/1:16,7:20:3:100,3,0	./.	1/1:10,7:16:3:101,3,0	0/1:28,0:22:46.73:47,0,99	1/1:8,2:9:6.01:205,6,0	0/0:11,0:11:14.63:0,15,212	0/0:14,7:19:0.47:0,0,1	1/1:27,0:19:1.75:17,2,0	./.	0/1:7,6:13:0:0,0,0	0/0:18,6:23:0:0,0,0	1/1:6,7:14:3:94,3,0	1/1:17,9:28:10:777,10,0	0/0:16,0:15:0.47:0,0,1	0/0:7,0:5:4.88:0,5,15
chr10	21219590	.	T	TG	790.06	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-7.513;DP=618;FS=0.734;HRun=6;HaplotypeScore=63.9994;InbreedingCoeff=0.9980;MQ=80.84;MQ0=0;MQRankSum=0.588;QD=26.34;ReadPosRankSum=-5.120;VQSLOD=1.4342;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:69.13:0,69,694	0/0:14,0:14:39.09:0,39,397	0/0:18,0:17:39.01:0,39,371	0/0:25,0:26:42.37:0,42,534	0/0:26,0:26:62.17:0,62,617	0/0:29,0:29:72.08:0,72,708	0/0:11,0:11:30.04:0,30,297	1/1:4,26:30:75.15:885,75,0	0/0:11,0:11:33.06:0,33,329	0/0:45,0:44:99:0,120,1223	0/0:31,0:31:84.18:0,84,852	0/0:14,0:14:39.09:0,39,397	0/0:25,0:25:72.08:0,72,712	0/0:24,0:24:66.11:0,66,660	0/0:25,0:25:69.04:0,69,671	0/0:19,0:19:51.04:0,51,500	0/0:18,0:18:48.08:0,48,476	0/0:15,0:15:39.09:0,39,397	0/0:17,0:17:35.94:0,36,351	0/0:30,0:27:66.10:0,66,661	0/0:20,0:20:54.11:0,54,544	0/0:18,0:17:33.03:0,33,326	0/0:25,0:23:57.10:0,57,571	0/0:11,0:11:30.07:0,30,306	0/0:25,0:21:51.06:0,51,502	0/0:18,0:18:48.11:0,48,490	0/0:32,0:32:81.09:0,81,803	0/0:16,0:13:39.09:0,39,396
chr10	21220381	.	CCTACATCCATGTCTTCATCTTCATCT	C	3957.59	PASS	AB=0.984;AC=22;AF=0.423;AN=52;BaseQRankSum=-6.286;DP=1179;FS=57.174;HRun=0;HaplotypeScore=273.0001;InbreedingCoeff=-0.2422;MQ=27.89;MQ0=314;MQRankSum=0.228;QD=4.21;ReadPosRankSum=3.080;VQSLOD=0.5769;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:51,0:29:55.50:100,0,55	./.	0/1:48,0:3:14.91:31,0,15	0/1:62,0:5:44.27:44,0,51	0/0:34,0:16:2.89:0,3,17	0/1:22,0:13:48.81:78,0,49	0/0:23,0:9:0.47:0,0,1	0/0:22,0:8:14.96:0,15,255	1/1:67,0:51:14.11:568,14,0	0/1:105,0:59:74.43:74,0,2683	0/0:30,0:10:3.01:0,3,48	0/1:64,0:48:92.27:386,0,92	0/1:57,0:41:61.72:385,0,62	1/1:79,0:53:41.35:598,41,0	1/1:73,0:53:34.09:451,34,0	0/1:72,0:55:99:627,0,156	0/1:29,0:17:9.22:9,0,47	0/1:27,0:12:13.69:14,0,91	0/1:24,0:7:78.18:78,0,186	0/0:25,0:9:9.03:0,9,168	0/1:39,0:15:32.14:65,0,32	0/0:33,0:16:9.03:0,9,152	./.	1/1:28,0:16:3.32:24,3,0	0/0:26,0:7:2.84:0,3,14	0/1:36,15:31:99:149,0,953	0/1:42,0:29:99:275,0,210	0/0:12,0:3:0.89:0,1,2
chr10	21220863	.	CTCATCTTCATCCCTATATCCATGTCT	C	1981.19	PASS	AB=1.000;AC=41;AF=0.820;AN=50;BaseQRankSum=2.087;DP=1059;FS=8.528;HRun=0;HaplotypeScore=142.9650;InbreedingCoeff=0.3611;MQ=35.00;MQ0=319;MQRankSum=-2.657;QD=2.36;ReadPosRankSum=5.097;VQSLOD=1.4951;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:43,0:19:6.82:53,7,0	0/1:14,0:8:6.79:29,0,7	0/0:45,0:10:6.56:0,7,130	0/0:51,0:12:6.94:0,7,178	1/1:22,0:10:2.92:17,3,0	1/1:23,0:9:6.61:24,7,0	1/1:23,0:7:1.25:3,1,0	0/0:60,0:19:36.13:0,36,519	1/1:55,0:26:16.54:82,17,0	1/1:34,0:11:27.31:247,27,0	./.	1/1:50,0:26:5.20:25,5,0	1/1:48,0:17:2.66:7,3,0	1/1:43,0:24:10.36:57,10,0	1/1:62,0:32:19.42:100,19,0	1/1:60,0:28:7.44:49,7,0	0/1:8,0:5:12.03:13,0,12	1/1:14,0:4:5.77:31,6,0	1/1:19,4:3:2.94:18,3,0	1/1:42,0:22:9.22:67,9,0	1/1:39,0:14:11.87:102,12,0	1/1:26,39:40:9.75:54,10,0	1/1:16,15:16:3.01:39,3,0	0/1:26,0:11:8.71:10,0,9	./.	1/1:41,41:49:99:997,101,0	1/1:34,0:17:12.35:96,12,0	./.
chr10	21222681	.	TCTGC	T	769	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.375;DP=706;FS=7.387;HRun=0;HaplotypeScore=112.0163;InbreedingCoeff=0.9824;MQ=88.62;MQ0=0;MQRankSum=-5.751;QD=45.24;ReadPosRankSum=-2.685;VQSLOD=3.5517;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,147,3881	0/0:8,0:8:24.08:0,24,658	0/0:21,0:21:60.21:0,60,1517	0/0:30,0:30:84.12:0,84,2115	0/0:15,0:15:42.14:0,42,1131	0/0:26,0:26:75.26:0,75,1995	0/0:26,0:26:75.26:0,75,1957	1/1:1,16:17:45.15:864,45,0	0/0:30,0:30:87.30:0,87,2310	0/0:21,0:21:60.20:0,60,1575	0/0:14,0:14:36.12:0,36,967	0/0:27,0:27:81.25:0,81,2061	0/0:35,0:35:99:0,102,2778	0/0:40,0:40:99:0,117,3203	0/0:36,0:36:99:0,108,2899	0/0:26,0:26:78.27:0,78,2137	0/0:26,0:26:75.26:0,75,2053	0/0:23,0:23:69.24:0,69,1761	0/0:17,0:17:48.16:0,48,1272	0/0:25,0:25:69.24:0,69,1883	0/0:28,0:28:84.29:0,84,2298	0/0:28,0:28:81.28:0,81,2148	0/0:19,0:19:57.20:0,57,1545	0/0:34,0:34:99:0,102,2794	0/0:21,0:21:60.21:0,60,1562	0/0:26,0:26:72.22:0,72,1835	0/0:31,0:31:87.30:0,87,2383	0/0:5,0:5:15.05:0,15,411
chr10	21224311	.	AAGAG	A	261.23	PASS	AB=0.957;AC=8;AF=0.148;AN=54;BaseQRankSum=-1.142;DP=537;FS=13.878;HRun=0;HaplotypeScore=96.4170;InbreedingCoeff=0.2033;MQ=59.83;MQ0=20;MQRankSum=2.649;QD=2.59;ReadPosRankSum=-1.422;VQSLOD=0.8594;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:19.37:0,19,281	0/0:9,0:9:3.48:0,3,49	./.	0/0:56,0:14:0:0,0,0	0/0:16,0:16:4.99:0,5,81	0/0:28,0:28:8.57:0,9,151	0/0:20,0:19:6.49:0,6,73	0/0:21,0:20:8.91:0,9,61	0/0:15,0:15:6.02:0,6,96	0/1:19,2:21:22.18:22,0,207	0/0:17,0:17:11.77:0,12,296	0/0:17,0:17:15.01:0,15,174	0/0:12,0:10:5.93:0,6,81	1/1:16,0:16:0.47:1,0,0	0/0:12,0:12:2.78:0,3,50	0/0:16,0:14:3.01:0,3,63	1/1:22,3:25:1.51:249,2,0	0/0:13,0:11:8.70:0,9,64	1/1:21,0:20:3.29:88,3,0	0/0:16,0:16:6:0,6,75	0/0:17,0:15:8.22:0,8,97	0/0:13,0:13:3.01:0,3,46	0/0:8,0:7:3.01:0,3,48	0/1:18,0:16:2.53:3,0,54	0/0:12,0:11:6.02:0,6,100	0/0:23,0:23:27:0,27,305	0/0:22,0:21:18.95:0,19,313	0/0:3,0:2:3.01:0,3,46
chr10	21224962	.	CA	C	12177.37	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=2.322;DP=456;FS=32.007;HRun=2;HaplotypeScore=55.2660;InbreedingCoeff=0.9388;MQ=78.05;MQ0=0;MQRankSum=-7.569;QD=28.86;ReadPosRankSum=4.199;VQSLOD=2.8916;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,25:26:60.20:777,60,0	1/1:0,8:8:12.04:153,12,0	0/0:15,0:13:15.35:0,15,269	0/0:19,0:18:31.95:0,32,456	1/1:0,12:12:21.02:253,21,0	1/1:5,19:24:66.17:812,66,0	1/1:1,36:37:93.30:1205,93,0	1/1:1,12:13:35.88:364,36,0	1/1:1,14:15:42.12:524,42,0	1/1:1,10:11:27.07:331,27,0	1/1:0,5:5:15.05:192,15,0	1/1:0,20:20:45.15:582,45,0	1/1:0,9:9:12.04:155,12,0	1/1:12,10:22:62.84:649,63,0	1/1:0,11:11:30.10:388,30,0	1/1:0,16:16:30.10:389,30,0	1/1:1,27:28:72.11:930,72,0	1/1:0,16:16:30.10:389,30,0	1/1:0,12:12:33.03:366,33,0	1/1:0,9:9:20.94:231,21,0	1/1:2,23:25:48.16:622,48,0	1/1:1,13:14:33.11:427,33,0	1/1:0,10:10:24.08:311,24,0	1/1:0,18:18:30.10:389,30,0	1/1:1,18:19:30.10:389,30,0	1/1:1,10:11:30.08:375,30,0	1/1:1,25:26:66.21:853,66,0	1/1:5,0:5:14.98:123,15,0
chr10	21227537	.	C	CTGTGTG	12474.60	PASS	AB=0.769;AC=48;AF=0.857;AN=56;BaseQRankSum=-3.423;DP=723;FS=0.936;HRun=0;HaplotypeScore=179.1378;InbreedingCoeff=0.2521;MQ=54.99;MQ0=21;MQRankSum=-3.164;QD=19.43;ReadPosRankSum=3.361;VQSLOD=4.3451;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:31,9:39:18.06:519,18,0	1/1:9,1:14:9.03:170,9,0	0/0:42,0:23:6.02:0,6,102	0/0:39,0:25:9.03:0,9,155	1/1:11,12:26:9.03:161,9,0	1/1:13,11:27:15.05:425,15,0	1/1:15,1:26:24.08:568,24,0	0/1:26,0:26:32.99:33,0,130	1/1:13,15:27:39.61:1209,40,0	0/1:16,0:29:26.26:391,0,26	1/1:9,0:20:26.28:356,26,0	1/1:14,7:22:21:506,21,0	1/1:20,9:28:24.08:716,24,0	1/1:14,11:27:18.06:511,18,0	1/1:25,11:40:39.13:1121,39,0	1/1:16,12:29:39.13:1162,39,0	0/1:14,0:25:41.64:209,0,42	1/1:9,10:21:15.05:430,15,0	0/1:8,1:12:43.83:220,0,44	1/1:13,8:24:11.93:272,12,0	1/1:28,0:29:4.98:124,5,0	1/1:16,5:23:18.06:454,18,0	1/1:5,0:11:6.49:119,6,0	1/1:14,1:27:23.77:569,24,0	1/1:9,1:13:6.02:136,6,0	1/1:16,10:26:40.75:985,41,0	1/1:14,14:30:32.61:1043,33,0	1/1:4,1:5:3.01:66,3,0
chr10	21227548	.	T	TGC	966.59	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=10.778;DP=689;FS=23.380;HRun=0;HaplotypeScore=155.7624;InbreedingCoeff=-0.2694;MQ=49.94;MQ0=23;MQRankSum=-6.185;QD=2.33;ReadPosRankSum=9.249;VQSLOD=0.4809;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:38:9.72:0,10,246	0/1:12,0:12:6.60:7,0,93	0/0:28,0:10:24.01:0,24,249	0/0:38,0:22:45.33:0,45,574	0/1:25,0:25:18.38:18,0,65	0/1:23,0:23:9.52:10,0,116	0/0:29,0:28:4.95:0,5,144	1/1:5,26:33:40.95:820,41,0	0/1:29,0:27:65.42:65,0,79	0/1:30,0:29:1.23:1,0,299	0/1:20,0:20:31.77:32,0,79	0/1:22,0:20:7.49:7,0,97	0/0:27,0:26:4.11:0,4,247	0/1:27,0:27:17.03:17,0,92	0/1:37,0:37:2.87:3,0,237	0/1:24,0:24:40.77:41,0,103	0/1:24,0:24:0.56:1,0,176	0/0:21,0:21:3.94:0,4,153	0/0:9,0:7:4.48:0,4,66	0/0:24,0:24:3.57:0,4,129	0/0:28,0:27:27.62:0,28,219	0/1:21,0:21:2.68:3,0,122	0/0:9,0:9:0.96:0,1,21	0/1:29,0:28:42.44:42,0,85	0/0:14,0:13:8.38:0,8,111	0/1:28,0:26:28.04:28,0,239	0/1:31,0:30:15.86:16,0,187	0/0:6,0:5:9.64:0,10,70
chr10	21227957	.	ATCTCTC	A	682.43	PASS	AB=1.000;AC=13;AF=0.260;AN=50;BaseQRankSum=5.718;DP=548;FS=27.026;HRun=0;HaplotypeScore=108.8069;InbreedingCoeff=0.3847;MQ=69.26;MQ0=23;MQRankSum=0.172;QD=4.95;ReadPosRankSum=2.090;VQSLOD=0.4912;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:14:8.68:0,9,128	0/0:12,0:12:3.95:0,4,29	0/0:33,0:18:0.47:0,0,1	./.	0/0:15,0:15:6.02:0,6,170	0/0:28,0:27:6.01:0,6,114	0/0:17,0:17:5.79:0,6,73	0/0:31,0:30:3.48:0,3,44	0/0:20,0:20:4.95:0,5,511	1/1:13,0:14:6.02:94,6,0	1/1:19,0:19:5.69:61,6,0	0/0:8,0:8:6.02:0,6,170	0/0:20,0:20:12.02:0,12,216	0/0:15,0:15:12:0,12,133	0/0:27,0:26:12.94:0,13,437	0/1:19,0:19:11.36:11,0,82	1/1:11,0:13:15.05:227,15,0	0/1:15,0:14:10.91:105,0,11	1/1:13,4:18:15.03:221,15,0	./.	0/1:21,0:21:53.81:54,0,80	0/0:26,0:25:3.01:0,3,75	0/0:15,0:15:6.02:0,6,151	0/0:22,0:21:24.08:0,24,712	0/0:14,0:14:2.99:0,3,24	0/0:19,0:19:15.05:0,15,370	1/1:18,0:18:5.38:58,5,0	./.
chr10	21228003	.	CTCTCTCTG	C	1074.45	PASS	AB=1.000;AC=10;AF=0.179;AN=56;BaseQRankSum=2.776;DP=516;FS=25.299;HRun=0;HaplotypeScore=120.8047;InbreedingCoeff=0.4328;MQ=53.12;MQ0=29;MQRankSum=-1.100;QD=8.60;ReadPosRankSum=-1.659;VQSLOD=0.3722;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:24:35.75:0,36,486	0/0:9,0:9:13.34:0,13,103	0/0:16,0:3:2.17:0,2,46	0/0:18,0:12:23.20:0,23,271	0/0:18,0:18:15.25:0,15,667	0/0:24,0:22:44.86:0,45,523	0/0:18,0:17:39.01:0,39,529	0/0:16,0:14:35.51:0,36,324	0/0:25,0:25:57.09:0,57,1205	1/1:23,0:21:53.76:528,54,0	1/1:3,19:22:5.93:67,6,0	0/0:20,0:20:52.22:0,52,928	0/0:23,0:22:50.85:0,51,745	0/1:9,0:9:3.69:4,0,302	0/0:17,0:16:36.01:0,36,811	0/0:20,0:20:40.88:0,41,596	0/1:23,0:22:99:162,0,257	0/1:16,0:15:35.39:35,0,247	1/1:19,0:19:38.12:417,38,0	0/0:18,0:18:50.94:0,51,567	0/0:22,0:21:0.65:0,1,388	0/0:13,0:13:23.97:0,24,315	0/0:10,0:10:20.99:0,21,333	0/0:25,0:23:57.03:0,57,1450	0/0:15,0:15:23.96:0,24,263	0/0:26,0:26:77.68:0,78,1378	0/1:13,0:13:13.26:13,0,158	0/0:11,0:8:20.95:0,21,247
chr10	21228718	.	CTGTGTGTGTG	C	11433.85	PASS	AB=0.679;AC=42;AF=0.750;AN=56;BaseQRankSum=0.879;DP=683;FS=6.594;HRun=0;HaplotypeScore=217.5556;InbreedingCoeff=0.6112;MQ=65.18;MQ0=7;MQRankSum=-7.191;QD=22.60;ReadPosRankSum=-0.039;VQSLOD=3.5190;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:20,4:24:16.25:380,16,0	1/1:5,4:9:12.04:353,12,0	0/0:29,0:18:0.47:0,0,1	0/0:42,0:32:3.01:0,3,35	1/1:12,10:23:21.07:604,21,0	1/1:7,8:17:18.06:496,18,0	1/1:21,0:23:6.02:120,6,0	0/0:23,0:21:5.93:0,6,92	1/1:15,14:31:45.15:1280,45,0	0/0:30,0:33:31.24:0,31,553	0/1:8,0:16:11.10:11,0,228	1/1:16,8:24:24.55:713,25,0	1/1:11,7:27:39.13:1042,39,0	1/1:19,7:27:24.08:669,24,0	1/1:13,16:28:39.13:1158,39,0	1/1:12,10:25:39.44:1009,39,0	0/0:14,0:27:36.12:0,36,640	1/1:12,2:13:6.02:178,6,0	0/0:16,0:21:31.90:0,32,519	1/1:18,7:27:17.30:423,17,0	1/1:25,0:25:2.70:25,3,0	1/1:18,9:28:6.02:159,6,0	1/1:17,0:18:5.45:47,5,0	1/1:15,6:21:12.04:356,12,0	1/1:15,8:22:21.07:601,21,0	1/1:22,6:28:18.03:426,18,0	1/1:21,12:36:41.72:1061,42,0	0/1:5,3:9:8.50:322,0,8
chr10	21230163	.	GA	G	483.57	PASS	AB=0.958;AC=3;AF=0.054;AN=56;BaseQRankSum=6.945;DP=727;FS=3.518;HRun=10;HaplotypeScore=70.7930;InbreedingCoeff=0.5869;MQ=76.35;MQ0=0;MQRankSum=-0.335;QD=9.12;ReadPosRankSum=0.755;VQSLOD=2.5317;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,111,1214	0/0:7,0:7:15.03:0,15,159	0/1:21,1:22:23.24:23,0,150	0/0:18,0:17:4.90:0,5,69	0/0:28,1:30:45.93:0,46,697	0/0:13,0:14:35.93:0,36,379	0/0:24,0:24:63.14:0,63,684	0/0:47,0:47:99:0,117,1287	1/1:4,26:30:38.95:566,39,0	0/0:27,0:27:69.19:0,69,763	0/0:26,0:25:60.15:0,60,653	0/0:33,0:33:66.16:0,66,715	0/0:34,0:34:81.18:0,81,876	0/0:21,0:21:51.14:0,51,564	0/0:30,0:30:78.21:0,78,863	0/0:36,0:37:93.06:0,93,994	0/0:32,0:32:84.22:0,84,920	0/0:18,0:18:45.12:0,45,497	0/0:13,0:14:35.93:0,36,379	0/0:29,0:29:87.19:0,87,947	0/0:28,0:28:75.18:0,75,816	0/0:20,0:20:45.11:0,45,491	0/0:26,1:27:49.15:0,49,769	0/0:32,0:33:90.07:0,90,968	0/0:16,0:16:48.13:0,48,531	0/0:33,0:33:84.21:0,84,919	0/0:26,0:27:78.02:0,78,827	0/0:11,0:11:27.07:0,27,299
chr10	21231892	.	GTT	G	2528.96	PASS	AB=0.644;AC=39;AF=0.696;AN=56;BaseQRankSum=-1.669;DP=537;FS=2.389;HRun=17;HaplotypeScore=70.3000;InbreedingCoeff=0.4556;MQ=75.68;MQ0=2;MQRankSum=-1.633;QD=6.31;ReadPosRankSum=6.159;VQSLOD=-0.2917;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,21:37:14.89:288,15,0	1/1:4,5:9:2.63:63,3,0	0/0:26,0:17:17.97:0,18,192	0/0:13,1:10:7.68:0,8,130	1/1:4,13:19:0.57:168,1,0	0/1:10,10:20:15.66:101,0,16	1/1:5,9:16:12.73:86,13,0	0/0:22,1:32:28.41:0,28,194	0/1:8,10:22:3:125,0,3	0/0:11,1:23:9.82:0,10,144	0/0:13,1:19:1.91:0,2,168	1/1:10,10:20:13.78:117,14,0	1/1:2,10:12:11.81:95,12,0	1/1:8,7:16:2.69:62,3,0	1/1:8,14:22:0.73:143,1,0	1/1:2,7:11:17.59:130,18,0	0/0:8,0:21:21.95:0,22,91	0/1:5,11:21:3.31:178,0,3	0/1:20,1:30:0.31:0,0,136	1/1:9,15:24:29.11:237,29,0	1/1:8,2:12:13.70:90,14,0	0/1:6,9:15:10.45:78,0,10	1/1:8,11:22:14.25:183,14,0	1/1:5,5:10:6.31:48,6,0	1/1:3,4:8:8.62:59,9,0	1/1:11,9:22:24.70:201,25,0	1/1:5,12:20:11.14:109,11,0	1/1:4,9:13:17.89:141,18,0
chr10	21233802	.	CACATATAT	C	12705.64	PASS	AB=0.810;AC=49;AF=0.875;AN=56;BaseQRankSum=5.893;DP=553;FS=1.736;HRun=0;HaplotypeScore=282.7211;InbreedingCoeff=0.8114;MQ=44.62;MQ0=2;MQRankSum=-2.052;QD=26.58;ReadPosRankSum=2.400;VQSLOD=4.3531;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:17,11:28:35.23:737,35,0	1/1:7,1:10:23.50:272,23,0	0/0:12,0:5:11.92:0,12,96	0/0:15,0:11:16.34:0,16,151	1/1:8,13:23:14.36:184,14,0	1/1:7,4:12:14.63:217,15,0	1/1:9,2:11:12.26:111,12,0	0/0:48,0:47:99:0,119,1965	1/1:5,6:11:17.97:326,18,0	1/1:23,0:42:99:1792,123,0	1/1:7,0:20:9.46:74,9,0	1/1:7,12:20:29.72:552,30,0	1/1:2,7:12:20.80:434,21,0	1/1:7,12:22:26.24:457,26,0	1/1:6,10:17:17.93:242,18,0	1/1:8,6:15:35.95:559,36,0	0/1:13,0:17:3.36:200,0,3	1/1:10,4:13:21.30:521,21,0	1/1:12,0:18:53.96:707,54,0	1/1:13,15:30:30.09:449,30,0	1/1:14,1:17:14.67:111,15,0	1/1:5,3:10:14.91:226,15,0	1/1:11,9:22:20.05:226,20,0	1/1:10,3:13:17.66:166,18,0	1/1:3,13:20:27.05:585,27,0	1/1:20,17:41:99:2169,106,0	1/1:3,7:12:33.08:707,33,0	1/1:16,5:21:20.18:682,20,0
chr10	21234318	.	TAC	T	1080.43	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-5.976;DP=817;FS=8.544;HRun=0;HaplotypeScore=180.6269;InbreedingCoeff=0.8788;MQ=58.93;MQ0=8;MQRankSum=3.543;QD=11.25;ReadPosRankSum=-0.212;VQSLOD=2.8048;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:44:68.01:0,68,691	0/0:7,0:7:11.04:0,11,98	0/0:31,0:18:3.01:0,3,41	0/0:40,0:18:5.98:0,6,66	0/0:19,0:30:24.01:0,24,220	0/0:12,0:24:27:0,27,260	0/0:10,0:22:10.66:0,11,106	0/0:40,0:39:32.45:0,32,360	0/0:21,0:36:21.93:0,22,244	1/1:21,11:34:14.46:330,14,0	1/1:10,14:24:27.05:305,27,0	0/0:10,0:27:27.84:0,28,248	0/0:20,0:52:56.98:0,57,505	0/0:10,0:24:24:0,24,212	0/0:16,0:36:38.04:0,38,332	0/0:7,0:28:30:0,30,264	1/1:16,9:25:24.07:399,24,0	0/0:19,0:25:31.35:0,31,266	1/1:7,6:12:18.05:203,18,0	0/0:13,0:26:24.56:0,25,246	0/0:16,0:37:30:0,30,280	0/0:14,0:19:23.58:0,24,236	0/0:7,0:19:12:0,12,106	0/0:16,0:31:61.71:0,62,552	0/0:6,0:29:13.35:0,13,108	0/0:21,1:40:16.57:0,17,401	0/0:11,0:28:33.01:0,33,315	0/0:9,0:25:38.94:0,39,342
chr10	21236039	.	C	CTGTGTGTGTGTG	4815.38	PASS	AB=1.000;AC=44;AF=0.880;AN=50;BaseQRankSum=-2.709;DP=678;FS=13.317;HRun=0;HaplotypeScore=272.6623;InbreedingCoeff=0.1965;MQ=59.91;MQ0=13;MQRankSum=1.376;QD=8.12;ReadPosRankSum=-0.597;VQSLOD=2.0994;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:41,0:37:0.43:377,0,0	1/1:10,0:10:0.47:1,0,0	0/1:28,0:19:0:0,0,0	./.	./.	1/1:22,0:22:3.18:153,3,0	1/1:32,0:30:3.87:19,4,0	1/1:29,0:28:5.05:49,5,0	0/1:22,0:22:0:0,0,0	1/1:23,0:23:18.95:567,19,0	1/1:9,0:8:5.99:49,6,0	1/1:25,2:28:11.26:331,11,0	1/1:28,0:27:3.60:64,4,0	1/1:28,0:27:5.58:66,6,0	1/1:24,0:24:1.99:109,2,0	1/1:15,1:18:3:173,3,0	0/1:32,0:32:36.22:433,0,36	1/1:32,0:31:23.90:428,24,0	1/1:23,0:22:6.47:176,6,0	0/0:13,0:13:0.94:0,1,2	1/1:47,0:45:8.97:129,9,0	1/1:14,0:14:2.63:64,3,0	./.	1/1:34,0:33:1.34:3,1,0	1/1:14,0:14:0.31:0,0,0	1/1:24,0:23:22.41:622,22,0	1/1:19,0:22:9.88:349,10,0	1/1:7,0:8:15.05:653,15,0
chr10	21236492	.	GA	G	181.03	PASS	AB=0.593;AC=1;AF=0.018;AN=56;BaseQRankSum=5.386;DP=658;FS=9.577;HRun=9;HaplotypeScore=61.1988;InbreedingCoeff=0.1162;MQ=76.39;MQ0=0;MQRankSum=4.393;QD=11.31;ReadPosRankSum=-1.827;VQSLOD=1.6100;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,1:32:56.60:0,57,876	0/0:12,0:12:36.11:0,36,415	0/1:5,11:16:11.11:255,0,11	0/0:11,0:11:24.06:0,24,265	0/0:22,0:22:63.19:0,63,724	0/0:37,1:38:74.84:0,75,1115	0/0:22,0:22:60.18:0,60,692	0/0:39,1:40:62.80:0,63,975	0/0:24,0:24:63.19:0,63,726	0/0:33,1:35:65.64:0,66,991	0/0:17,0:17:45.13:0,45,519	0/0:21,0:21:60.18:0,60,691	0/0:27,0:27:78.23:0,78,900	0/0:20,0:20:57.15:0,57,643	0/0:32,0:32:84.25:0,84,968	0/0:27,0:27:81.22:0,81,919	0/0:15,0:15:42.12:0,42,484	0/0:14,0:14:30.09:0,30,346	0/0:22,0:22:51.15:0,51,588	0/0:28,0:28:78.23:0,78,897	0/0:28,0:27:66.20:0,66,762	0/0:30,0:30:84.23:0,84,950	0/0:26,0:26:75.22:0,75,860	0/0:23,0:23:66.18:0,66,748	0/0:19,0:19:54.16:0,54,623	0/0:25,0:25:57.13:0,57,643	0/0:22,0:22:60.18:0,60,691	0/0:10,0:10:27.08:0,27,312
chr10	21237908	.	T	TATC	4321.29	PASS	AB=0.964;AC=9;AF=0.161;AN=56;BaseQRankSum=-6.162;DP=736;FS=18.425;HRun=0;HaplotypeScore=129.8480;InbreedingCoeff=0.8878;MQ=63.41;MQ0=1;MQRankSum=0.164;QD=33.50;ReadPosRankSum=0.918;VQSLOD=3.9753;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:75.16:0,75,1072	0/0:14,0:14:42.09:0,42,597	0/0:27,0:21:33.13:0,33,415	0/0:27,0:25:49.44:0,49,778	0/0:31,0:31:81.08:0,81,1150	0/0:25,0:25:66.10:0,66,911	0/0:30,0:30:81.24:0,81,1185	0/0:34,0:34:87.18:0,87,1191	0/0:24,0:24:63.20:0,63,938	1/1:3,26:30:78.22:1406,78,0	1/1:5,27:32:57.19:1134,57,0	0/0:32,0:32:81.21:0,81,1187	0/0:38,0:38:90.20:0,90,1261	0/0:30,0:30:72.22:0,72,1051	0/0:33,0:33:93.24:0,93,1348	0/0:29,0:29:84.26:0,84,1230	1/1:2,19:22:45.15:950,45,0	0/0:11,0:11:27.09:0,27,410	1/1:3,15:18:45.14:825,45,0	0/0:34,0:34:93.22:0,93,1328	0/0:23,0:23:60.19:0,60,891	0/0:17,0:17:48.16:0,48,717	0/0:28,0:28:63.18:0,63,918	0/0:27,0:27:72.24:0,72,1090	0/0:23,0:23:53.54:0,54,787	0/1:26,1:27:6.89:7,0,740	0/0:30,0:30:84.27:0,84,1260	0/0:12,0:12:27.06:0,27,389
chr10	21238648	.	GA	G	9348.56	PASS	AB=0.574;AC=35;AF=0.625;AN=56;BaseQRankSum=11.848;DP=588;FS=6.031;HRun=8;HaplotypeScore=56.4331;InbreedingCoeff=0.9233;MQ=71.83;MQ0=0;MQRankSum=-2.453;QD=23.20;ReadPosRankSum=3.848;VQSLOD=5.4693;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,33:33:81.13:782,81,0	0/0:9,0:9:27.08:0,27,326	0/0:15,0:14:30.06:0,30,339	0/0:10,0:10:21.06:0,21,245	0/0:23,0:23:63.14:0,63,728	1/1:2,19:21:45.07:435,45,0	1/1:1,18:19:51.08:492,51,0	1/1:5,25:30:75.11:723,75,0	1/1:5,21:26:54.08:521,54,0	0/0:32,0:32:75.22:0,75,896	0/0:22,0:22:57.17:0,57,689	1/1:1,18:19:48.07:464,48,0	1/1:1,31:32:78.13:753,78,0	1/1:2,22:24:57.09:550,57,0	0/0:22,0:22:54.17:0,54,652	0/0:15,0:15:45.14:0,45,544	0/0:21,0:22:66.07:0,66,774	1/1:3,13:16:27.03:261,27,0	0/0:15,0:15:39.12:0,39,471	1/1:0,22:22:63.10:607,63,0	1/1:1,16:17:42.07:406,42,0	1/1:2,16:18:39.06:377,39,0	1/1:1,24:25:66.10:637,66,0	1/1:0,12:12:30.05:290,30,0	1/1:0,23:23:69.11:666,69,0	0/1:7,19:27:20.94:488,0,21	1/1:0,23:23:57.09:550,57,0	1/1:4,12:16:36.06:347,36,0
chr10	21239380	.	ACACAC	A	2123.15	PASS	AB=0.895;AC=17;AF=0.304;AN=56;BaseQRankSum=10.859;DP=575;FS=15.482;HRun=0;HaplotypeScore=167.3589;InbreedingCoeff=-0.3412;MQ=58.42;MQ0=27;MQRankSum=-2.663;QD=5.96;ReadPosRankSum=2.719;VQSLOD=1.6715;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:37,0:37:99:127,0,273	0/0:12,0:9:25.42:0,25,183	0/0:18,0:10:27.97:0,28,331	0/0:24,0:14:42.13:0,42,512	0/0:16,0:16:19.33:0,19,104	0/1:13,2:14:66.33:85,0,66	0/1:31,2:33:99:182,0,126	0/0:25,0:24:54.04:0,54,209	0/1:18,2:18:2.65:228,0,3	0/0:29,0:27:55.17:0,55,419	0/0:9,0:9:16.87:0,17,100	0/1:19,5:22:72.74:85,0,73	0/1:21,2:23:14.18:202,0,14	0/1:14,6:20:62.29:150,0,62	0/0:19,0:18:10.21:0,10,304	0/0:19,0:16:14.92:0,15,163	0/0:31,0:30:11.49:0,11,243	0/1:22,1:21:82.37:253,0,82	0/0:17,0:17:41.88:0,42,360	0/1:6,3:9:1.36:106,0,1	0/1:33,0:29:88.06:88,0,146	0/1:13,3:15:23.24:120,0,23	0/1:9,0:9:28.57:37,0,29	0/1:26,4:27:99:158,0,101	0/1:13,1:12:51.11:153,0,51	0/1:21,2:22:99:107,0,111	0/1:13,2:15:26.92:120,0,27	0/1:9,3:12:54.80:82,0,55
chr10	21239385	.	C	CAA	9858.72	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=1.327;DP=582;FS=16.840;HRun=2;HaplotypeScore=132.9487;InbreedingCoeff=0.8956;MQ=67.12;MQ0=21;MQRankSum=-3.636;QD=18.60;ReadPosRankSum=3.157;VQSLOD=1.3951;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:34,0:34:95.34:803,95,0	1/1:10,0:7:20.98:182,21,0	0/0:23,0:15:37.12:0,37,366	0/0:29,0:19:49.91:0,50,459	1/1:19,0:19:35.90:298,36,0	1/1:15,0:14:41.73:356,42,0	1/1:29,0:29:77.04:679,77,0	1/1:29,0:28:71.97:653,72,0	1/1:20,0:18:48.31:425,48,0	1/1:28,0:26:62.66:591,63,0	1/1:9,0:9:20.98:228,21,0	1/1:23,0:22:47.44:414,47,0	1/1:7,17:25:21.09:138,21,0	1/1:20,0:20:45.93:332,46,0	1/1:16,0:16:35.88:331,36,0	1/1:8,0:17:6.17:112,6,0	1/1:5,24:32:5.91:75,6,0	1/1:19,1:19:45.94:403,46,0	1/1:20,0:20:53.71:474,54,0	1/1:11,0:11:28.96:251,29,0	1/1:30,0:28:62.37:527,62,0	1/1:14,0:13:38.62:289,39,0	1/1:12,0:12:33.44:285,33,0	1/1:31,0:29:68.13:529,68,0	1/1:12,0:12:35.62:279,36,0	1/1:24,0:23:63.88:587,64,0	1/1:15,0:15:40.93:366,41,0	1/1:11,0:11:32.15:254,32,0
chr10	21243130	.	GTT	G	6118.46	PASS	AB=0.986;AC=49;AF=0.875;AN=56;BaseQRankSum=-6.927;DP=532;FS=16.009;HRun=3;HaplotypeScore=102.2480;InbreedingCoeff=0.2107;MQ=47.73;MQ0=34;MQRankSum=5.189;QD=12.24;ReadPosRankSum=-1.723;VQSLOD=0.5706;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:31,0:29:0.65:227,0,1	1/1:6,0:5:8.86:67,9,0	0/1:26,0:4:7.27:23,0,7	0/0:32,0:5:8.97:0,9,55	1/1:17,0:17:15.19:161,15,0	1/1:23,0:23:17.11:321,17,0	1/1:25,1:23:31.11:327,31,0	0/1:27,0:25:62.84:256,0,63	1/1:18,1:19:32.29:300,32,0	1/1:17,0:15:16.88:308,17,0	1/1:9,0:7:11.97:96,12,0	1/1:20,0:19:20.87:277,21,0	0/1:19,0:18:1.75:199,0,2	1/1:13,0:11:15:156,15,0	1/1:16,0:15:29.20:194,29,0	1/1:20,0:19:42.06:308,42,0	1/1:14,0:11:12.81:86,13,0	1/1:21,0:21:16.53:285,17,0	1/1:14,0:9:26.86:210,27,0	1/1:18,0:18:37.21:323,37,0	1/1:24,0:23:35.34:275,35,0	1/1:13,0:12:15.83:165,16,0	1/1:21,0:21:45.86:411,46,0	1/1:15,1:16:25.12:273,25,0	1/1:21,0:21:19.19:257,19,0	0/1:26,1:25:2.68:318,0,3	1/1:12,0:12:9.41:142,9,0	1/1:9,0:7:20.82:150,21,0
chr10	21243243	.	CCT	C	1160.46	PASS	AB=0.939;AC=24;AF=0.480;AN=50;BaseQRankSum=3.876;DP=500;FS=19.390;HRun=0;HaplotypeScore=76.1626;InbreedingCoeff=0.0143;MQ=69.91;MQ0=10;MQRankSum=-0.317;QD=3.65;ReadPosRankSum=2.769;VQSLOD=0.6369;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:23,1:25:11.49:11,0,239	0/0:14,0:14:12:0,12,130	./.	./.	0/0:10,0:16:6.65:0,7,74	0/1:14,2:16:15:15,0,200	1/1:14,5:19:10.84:104,11,0	./.	0/1:17,0:17:14.79:15,0,162	0/0:18,0:18:9.88:0,10,106	0/0:15,0:15:21.05:0,21,269	0/1:11,1:12:53.89:54,0,103	0/1:19,0:19:6.02:6,0,281	0/1:13,0:13:12.54:13,0,175	0/1:12,0:12:21.04:21,0,80	0/0:8,0:14:6:0,6,52	0/0:19,1:22:5.88:0,6,331	1/1:7,8:15:26.88:268,27,0	0/0:18,0:19:4.74:0,5,135	0/1:13,7:21:66.39:146,0,66	1/1:13,4:16:11.86:113,12,0	0/1:14,1:15:46.45:46,0,151	1/1:7,10:17:11.78:113,12,0	0/1:17,3:20:63.56:64,0,283	0/1:22,1:23:8.99:9,0,268	0/1:19,0:19:0.86:1,0,240	1/1:11,5:15:17.88:179,18,0	1/1:8,9:17:14.87:146,15,0
chr10	21243769	.	AACACAC	A	1382.80	PASS	AB=0.941;AC=35;AF=0.875;AN=40;BaseQRankSum=0.637;DP=534;FS=0.000;HRun=0;HaplotypeScore=120.6902;InbreedingCoeff=0.1974;MQ=72.07;MQ0=12;MQRankSum=-1.164;QD=4.23;ReadPosRankSum=-0.373;VQSLOD=1.9382;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:31,3:32:6.01:120,6,0	0/0:6,0:6:3.01:0,3,38	./.	./.	0/0:16,0:17:2.10:0,2,41	1/1:14,0:14:3:59,3,0	1/1:19,0:18:1.96:7,2,0	./.	0/1:14,1:16:6.30:54,0,6	1/1:13,0:17:6.91:85,7,0	1/1:13,0:14:3.90:44,4,0	1/1:12,2:13:3.01:60,3,0	1/1:12,2:12:3.01:60,3,0	1/1:18,3:24:11.83:191,12,0	1/1:18,0:21:0.88:2,1,0	1/1:15,2:22:6.90:104,7,0	./.	1/1:17,2:21:8.33:143,8,0	./.	1/1:11,4:15:11.91:120,12,0	1/1:34,0:34:3:32,3,0	./.	1/1:5,1:6:3.44:20,3,0	./.	1/1:15,5:22:12.04:204,12,0	./.	1/1:13,3:16:6.02:120,6,0	1/1:2,1:3:3.01:60,3,0
chr10	21244614	.	GA	G	10794.71	PASS	AB=0.954;AC=47;AF=0.839;AN=56;BaseQRankSum=-6.524;DP=680;FS=7.275;HRun=10;HaplotypeScore=75.5686;InbreedingCoeff=0.6294;MQ=69.75;MQ0=1;MQRankSum=-1.772;QD=17.90;ReadPosRankSum=2.484;VQSLOD=5.6786;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,27:28:58.47:585,58,0	0/1:7,1:8:1.99:2,0,207	0/1:34,1:23:25.09:25,0,223	0/1:26,0:24:4.22:4,0,319	0/0:30,3:34:14.91:0,15,795	1/1:3,24:27:65.98:573,66,0	1/1:2,18:20:45.35:435,45,0	1/1:8,33:41:98.96:856,99,0	1/1:2,18:20:22.98:412,23,0	1/1:3,29:32:57.20:719,57,0	1/1:3,27:30:68.95:599,69,0	1/1:1,24:25:68.98:599,69,0	1/1:3,23:26:23.80:436,24,0	1/1:0,16:16:41.99:365,42,0	0/0:25,0:25:60.16:0,60,657	0/0:16,2:18:0.59:0,1,449	1/1:0,12:12:35.99:313,36,0	1/1:0,15:15:44.99:390,45,0	1/1:5,16:21:48.46:417,48,0	1/1:8,28:36:80.90:689,81,0	1/1:1,10:12:28.07:220,28,0	1/1:4,23:27:53.94:466,54,0	1/1:5,25:30:55.48:537,55,0	1/1:1,14:15:35.99:313,36,0	1/1:3,21:24:42.96:409,43,0	1/1:6,22:28:37.61:542,38,0	1/1:3,27:31:65.02:553,65,0	1/1:1,16:17:38.40:338,38,0
chr10	21245817	.	CT	C	1001.92	PASS	AB=0.867;AC=11;AF=0.196;AN=56;BaseQRankSum=7.216;DP=568;FS=2.125;HRun=12;HaplotypeScore=66.4344;InbreedingCoeff=0.6428;MQ=81.23;MQ0=2;MQRankSum=-0.128;QD=8.08;ReadPosRankSum=0.152;VQSLOD=2.5173;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:19:50.97:0,51,501	1/1:1,5:6:14.94:116,15,0	0/0:33,1:24:23.14:0,23,236	0/0:28,0:21:27.91:0,28,178	1/1:4,14:20:42.90:314,43,0	0/0:25,0:26:43.44:0,43,596	0/0:23,3:26:16.64:0,17,526	0/0:20,1:22:4.46:0,4,394	0/0:15,1:17:21.66:0,22,377	0/0:17,0:17:36.07:0,36,365	0/0:22,1:23:23.01:0,23,478	0/0:13,1:14:6.81:0,7,244	0/0:14,0:14:42.02:0,42,402	0/0:15,0:16:41.92:0,42,410	1/1:2,20:23:56.76:441,57,0	1/1:2,14:16:32.87:256,33,0	0/0:15,0:15:32.89:0,33,313	0/0:22,0:22:10.78:0,11,451	0/1:19,2:22:1.51:2,0,329	0/0:29,1:30:54.91:0,55,733	0/1:14,3:18:18.81:19,0,349	0/0:15,0:16:47.93:0,48,469	0/1:14,4:19:21.30:21,0,332	0/0:11,0:11:30.06:0,30,304	0/0:14,1:17:14.83:0,15,351	0/0:28,0:28:78.08:0,78,773	0/0:35,2:37:52.71:0,53,889	0/0:12,0:12:35.97:0,36,344
chr10	21246533	.	T	TC	2352.25	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-7.362;DP=659;FS=0.000;HRun=7;HaplotypeScore=68.3050;InbreedingCoeff=0.9972;MQ=85.75;MQ0=0;MQRankSum=-1.072;QD=27.67;ReadPosRankSum=1.018;VQSLOD=4.2636;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,132,1263	1/1:0,13:13:36.11:434,36,0	0/0:27,0:27:46.30:0,46,560	0/0:21,0:21:50.94:0,51,446	1/1:1,21:22:57.17:687,57,0	0/0:20,0:20:48.06:0,48,457	0/0:21,0:21:57.07:0,57,541	0/0:36,0:36:75.08:0,75,717	0/0:32,0:32:90.09:0,90,854	0/0:20,0:20:57.07:0,57,542	0/0:26,0:26:72.07:0,72,685	0/0:16,0:16:45.07:0,45,434	0/0:29,0:29:69.09:0,69,666	0/0:24,0:24:60.09:0,60,579	1/1:3,26:30:72.09:848,72,0	1/1:3,17:20:45.14:543,45,0	0/0:26,0:26:75.09:0,75,712	0/0:23,0:23:53.98:0,54,497	0/0:22,0:22:48.03:0,48,455	0/0:18,0:18:36.92:0,37,344	0/0:18,0:18:51.08:0,51,492	0/0:23,0:23:63.08:0,63,602	0/0:22,0:22:54.08:0,54,520	0/0:17,0:17:36.02:0,36,335	0/0:20,1:21:17.83:0,18,452	0/0:27,0:27:77.34:0,77,731	0/0:23,0:23:63.09:0,63,602	0/0:10,0:10:27.04:0,27,261
chr10	21247244	.	GACA	G	4346.06	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=11.103;DP=774;FS=0.401;HRun=0;HaplotypeScore=162.7842;InbreedingCoeff=0.9971;MQ=90.76;MQ0=0;MQRankSum=-6.770;QD=38.12;ReadPosRankSum=0.797;VQSLOD=5.5915;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:64,0:64:99:0,184,3899	0/0:15,0:15:42.14:0,42,931	0/0:38,0:38:99:0,99,2143	0/0:34,0:34:93.19:0,93,1785	0/0:29,0:29:75.26:0,75,1633	0/0:24,0:24:69.22:0,69,1464	0/0:28,0:28:78.25:0,78,1640	0/0:31,0:31:81.15:0,81,1705	0/0:18,0:18:51.18:0,51,1122	1/1:3,30:33:83.95:1260,84,0	1/1:4,24:28:51.17:827,51,0	0/0:21,0:21:63.22:0,63,1387	0/0:28,0:28:84.29:0,84,1840	0/0:25,0:25:75.24:0,75,1612	0/0:29,0:29:84.29:0,84,1852	0/0:32,0:32:96.32:0,96,2082	1/1:0,31:31:87.30:1419,87,0	0/0:25,0:25:75.21:0,75,1627	1/1:3,19:22:54.14:840,54,0	0/0:24,0:24:69.24:0,69,1522	0/0:38,0:38:99:0,108,2365	0/0:18,0:18:54.17:0,54,1163	0/0:30,0:30:90.30:0,90,1935	0/0:23,0:23:63.18:0,63,1316	0/0:27,0:27:81.27:0,81,1753	0/0:23,1:24:17.10:0,17,1273	0/0:25,0:24:63.15:0,63,1201	0/0:10,0:10:30.09:0,30,627
chr10	21247800	.	TGG	T	10589.87	PASS	AB=0.921;AC=47;AF=0.839;AN=56;BaseQRankSum=-5.428;DP=626;FS=3.208;HRun=12;HaplotypeScore=163.8293;InbreedingCoeff=0.5395;MQ=60.65;MQ0=3;MQRankSum=5.672;QD=18.74;ReadPosRankSum=1.911;VQSLOD=2.4337;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:17,30:48:98.41:949,98,0	1/1:1,0:1:3.01:30,3,0	0/1:29,1:24:47.19:47,0,139	0/1:20,0:13:40.74:56,0,41	1/1:4,5:11:16.88:141,17,0	1/1:4,21:25:50.78:518,51,0	1/1:7,16:24:47.39:460,47,0	1/1:11,15:28:60.42:551,60,0	1/1:2,26:29:74.89:743,75,0	0/0:15,0:16:20.62:0,21,87	0/0:14,0:14:8.34:0,8,38	1/1:3,19:22:44.84:457,45,0	1/1:2,19:21:47.91:487,48,0	1/1:7,16:23:59.60:562,60,0	1/1:10,20:30:77.64:745,78,0	1/1:3,12:16:26.72:239,27,0	0/0:29,0:30:6.60:0,7,80	1/1:7,16:23:36.32:474,36,0	0/1:12,0:11:7.23:7,0,32	1/1:9,21:30:68.31:662,68,0	1/1:2,23:25:57.05:579,57,0	1/1:3,17:20:41.90:413,42,0	1/1:9,16:26:44.50:442,44,0	1/1:3,20:24:47.84:474,48,0	1/1:8,18:26:59.63:564,60,0	1/1:10,8:20:19.99:329,20,0	1/1:0,19:19:51.10:518,51,0	1/1:2,4:6:14.89:142,15,0
chr10	21247801	.	G	GTGTGTGTGT	3437.55	PASS	AB=0.995;AC=17;AF=0.304;AN=56;BaseQRankSum=-10.192;DP=607;FS=0.000;HRun=0;HaplotypeScore=267.7937;InbreedingCoeff=0.2187;MQ=62.55;MQ0=3;MQRankSum=-0.241;QD=12.15;ReadPosRankSum=-10.178;VQSLOD=-0.2862;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:47,0:47:15.46:15,0,774	0/0:2,0:2:3.01:0,3,77	0/0:34,0:25:17.27:0,17,821	0/0:22,0:13:32.50:0,33,466	0/0:11,0:11:23.87:0,24,579	0/1:25,0:25:24.01:24,0,431	0/1:24,0:24:99:105,0,507	0/1:27,0:27:87.46:87,0,524	0/0:29,0:29:53.19:0,53,811	1/1:2,8:13:32.70:1088,33,0	1/1:0,7:10:9.03:402,9,0	0/0:22,0:22:29.54:0,30,427	0/0:21,0:21:25.49:0,25,447	0/1:23,0:23:29.76:30,0,460	0/0:30,0:30:71.77:0,72,1319	0/0:16,0:16:29.46:0,29,805	1/1:3,15:21:26.79:1011,27,0	0/0:23,0:23:10.41:0,10,419	1/1:5,2:7:17.08:476,17,0	0/1:30,0:30:14.03:14,0,539	0/0:25,0:25:11.29:0,11,482	0/0:20,0:20:23.32:0,23,421	0/1:26,0:26:8.38:8,0,417	0/0:24,0:24:53.88:0,54,517	0/0:26,0:26:10.50:0,11,502	0/1:19,1:20:99:174,0,268	0/0:19,0:19:50.93:0,51,604	0/1:6,0:6:3.81:4,0,125
chr10	21247811	.	GGT	G	1745.94	PASS	AB=0.969;AC=25;AF=0.446;AN=56;BaseQRankSum=11.568;DP=630;FS=6.533;HRun=0;HaplotypeScore=184.5694;InbreedingCoeff=-0.3621;MQ=72.85;MQ0=2;MQRankSum=3.105;QD=3.51;ReadPosRankSum=14.633;VQSLOD=-0.5810;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:48,1:49:99:142,0,108	0/1:2,1:3:17.89:18,0,19	0/0:42,0:33:57.98:0,58,724	0/0:25,0:17:5.09:0,5,255	0/1:10,0:10:7.80:8,0,54	0/1:26,0:26:52.78:53,0,72	0/1:20,1:21:15.18:118,0,15	0/1:30,0:30:84.08:84,0,163	1/1:27,1:28:49.19:221,49,0	0/0:16,0:16:40.08:0,40,263	0/0:11,0:11:17.84:0,18,138	0/1:21,0:21:9.33:76,0,9	0/1:23,0:23:31.95:76,0,32	0/1:23,1:24:34.82:83,0,35	0/1:26,3:29:11.89:195,0,12	0/1:18,1:19:67.41:100,0,67	0/0:25,0:23:16.89:0,17,256	0/1:21,0:21:48.74:52,0,49	0/0:14,0:12:31.85:0,32,285	0/1:26,1:27:18.48:106,0,18	1/1:24,0:24:17.76:101,18,0	0/1:21,0:21:16.04:81,0,16	1/1:19,0:19:14.92:88,15,0	0/1:27,0:27:49.18:89,0,49	0/1:24,0:24:38.74:82,0,39	0/1:18,1:19:34.50:35,0,134	0/1:25,0:25:72.49:93,0,72	0/1:7,0:7:16.05:16,0,34
chr10	21248467	.	AAC	A	6375.21	PASS	AB=0.536;AC=35;AF=0.625;AN=56;BaseQRankSum=-1.459;DP=503;FS=20.337;HRun=0;HaplotypeScore=80.6967;InbreedingCoeff=0.9282;MQ=74.05;MQ0=6;MQRankSum=-2.203;QD=20.77;ReadPosRankSum=2.795;VQSLOD=3.6402;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:17,1:18:44.07:359,44,0	0/0:11,0:10:29.98:0,30,302	0/0:21,0:13:32.81:0,33,277	0/0:32,0:18:24.13:0,24,260	0/0:24,0:24:47.91:0,48,417	1/1:15,1:16:42.81:345,43,0	1/1:18,2:20:53.79:441,54,0	1/1:26,0:26:75:675,75,0	1/1:20,5:25:68.92:585,69,0	0/0:22,0:22:62.70:0,63,658	0/0:15,0:15:41.97:0,42,438	1/1:11,3:14:32.78:256,33,0	1/1:15,3:18:50.86:419,51,0	0/1:2,13:15:6.89:91,0,7	0/0:15,0:15:29.98:0,30,290	0/0:16,0:16:39:0,39,377	0/0:24,0:23:48.03:0,48,537	1/1:15,4:18:50.36:375,50,0	0/0:16,0:16:41.30:0,41,414	1/1:16,0:16:44.89:367,45,0	1/1:17,1:18:36.38:290,36,0	1/1:14,0:14:32.87:265,33,0	1/1:16,2:18:47.88:389,48,0	1/1:5,1:6:13.53:104,14,0	1/1:13,1:14:38.97:330,39,0	1/1:24,0:24:34.99:504,35,0	1/1:21,1:21:45.90:485,46,0	1/1:4,0:4:11.98:97,12,0
chr10	21248471	.	C	CAG	694.46	PASS	AB=0.966;AC=26;AF=0.542;AN=48;BaseQRankSum=-4.863;DP=526;FS=9.871;HRun=0;HaplotypeScore=121.6261;InbreedingCoeff=0.3012;MQ=68.96;MQ0=8;MQRankSum=2.972;QD=2.18;ReadPosRankSum=1.274;VQSLOD=1.9876;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:19,0:19:0.01:0,0,0	1/1:12,0:11:14.99:146,15,0	./.	./.	0/0:26,0:26:3.01:0,3,32	0/1:20,0:19:0.02:0,0,0	1/1:19,0:19:2.33:19,2,0	0/1:26,0:26:0:0,0,0	0/0:23,0:23:14.16:0,14,69	1/1:24,0:24:14.97:133,15,0	1/1:17,0:17:12.01:131,12,0	0/1:12,0:12:11.88:12,0,20	0/0:18,0:18:8.48:0,8,41	0/0:17,0:17:11.08:0,11,54	1/1:9,3:13:3.01:44,3,0	0/1:12,5:19:8.37:143,0,8	0/1:24,2:26:50.83:162,0,51	1/1:20,0:19:3.49:23,3,0	0/1:17,0:17:5.05:5,0,15	./.	./.	0/1:15,0:14:0:0,0,0	0/1:23,0:23:0:0,0,0	0/1:6,0:6:0:0,0,0	0/0:15,0:15:2.74:0,3,14	1/1:25,0:25:1.72:4,2,0	0/0:24,0:23:8.15:0,8,36	1/1:5,0:5:0.47:1,0,0
chr10	21248513	.	GAGAGAGAA	G	3455.88	PASS	AB=0.992;AC=21;AF=0.375;AN=56;BaseQRankSum=-2.212;DP=648;FS=19.035;HRun=0;HaplotypeScore=158.6726;InbreedingCoeff=-0.1281;MQ=54.22;MQ0=28;MQRankSum=-0.638;QD=9.49;ReadPosRankSum=2.250;VQSLOD=1.7196;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:27:99:178,0,321	0/0:13,0:12:29.92:0,30,308	0/0:55,0:12:24.77:0,25,273	0/0:84,0:20:35.25:0,35,373	0/0:23,0:23:30:0,30,461	0/1:20,0:18:61.22:143,0,61	1/1:19,1:18:40.12:361,40,0	1/1:17,0:17:2.79:297,3,0	0/1:17,1:18:42.61:340,0,43	0/0:21,0:21:57.14:0,57,1083	0/0:20,0:20:53.98:0,54,978	0/1:13,0:13:52.33:113,0,52	0/1:21,0:21:99:229,0,121	0/1:18,0:18:99:174,0,290	0/0:16,0:16:32:0,32,398	0/0:18,0:18:42.48:0,42,808	0/0:24,0:23:48.58:0,49,1059	0/1:23,1:23:48.81:208,0,49	0/0:9,0:9:26.79:0,27,532	1/1:11,0:11:15.99:145,16,0	0/1:20,0:19:40.25:128,0,40	0/1:22,0:22:55.24:307,0,55	0/1:28,1:29:4.20:4,0,41	0/1:16,0:15:39.84:155,0,40	0/1:23,0:23:93.30:172,0,93	0/1:27,0:27:99:187,0,409	0/1:25,0:24:99:112,0,426	0/1:13,0:13:2.28:202,0,2
chr10	21248517	.	GAGAA	G	5851.45	PASS	AB=0.975;AC=34;AF=0.607;AN=56;BaseQRankSum=0.800;DP=616;FS=4.506;HRun=0;HaplotypeScore=109.4293;InbreedingCoeff=0.8371;MQ=55.72;MQ0=28;MQRankSum=0.126;QD=18.06;ReadPosRankSum=2.761;VQSLOD=4.5865;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:25,1:26:45.37:369,45,0	0/0:12,0:11:11.49:0,11,160	0/0:56,0:12:24.76:0,25,273	0/0:94,0:27:36.04:0,36,454	0/0:21,0:21:24.01:0,24,302	1/1:17,1:16:36.12:322,36,0	1/1:19,1:18:43.66:409,44,0	1/1:18,0:18:49.99:426,50,0	1/1:11,3:14:35.75:400,36,0	0/0:19,0:19:56.79:0,57,714	0/0:20,0:20:52.59:0,53,568	1/1:8,3:11:26.39:256,26,0	1/1:14,2:16:44.81:434,45,0	0/1:18,1:19:44.14:269,0,44	0/0:17,0:17:35:0,35,348	0/0:18,0:18:42.48:0,42,555	0/0:22,0:21:50.44:0,50,660	1/1:19,3:21:51.66:454,52,0	0/0:13,0:13:35.80:0,36,464	1/1:10,0:10:22.61:203,23,0	1/1:15,1:15:32.98:284,33,0	1/1:21,0:21:49.87:421,50,0	1/1:23,1:24:0.78:15,1,0	1/1:14,1:14:29.54:257,30,0	1/1:17,1:18:38.60:367,39,0	1/1:25,0:25:38.96:449,39,0	0/1:18,0:17:2.59:279,0,3	1/1:13,0:13:32.59:237,33,0
chr10	21248519	.	GAA	G	6117.39	PASS	AB=1.000;AC=37;AF=0.661;AN=56;BaseQRankSum=1.185;DP=615;FS=0.428;HRun=2;HaplotypeScore=92.2868;InbreedingCoeff=0.8932;MQ=57.73;MQ0=28;MQRankSum=-0.862;QD=18.43;ReadPosRankSum=1.767;VQSLOD=2.5556;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:19:47.88:392,48,0	0/1:12,0:11:11.39:11,0,112	0/0:58,0:13:25.82:0,26,275	0/0:97,0:30:35.63:0,36,453	0/0:20,0:20:24.01:0,24,252	1/1:17,0:15:35.74:294,36,0	1/1:21,0:19:47.79:391,48,0	1/1:19,0:19:53.38:456,53,0	1/1:15,0:15:38.73:348,39,0	0/0:19,0:19:47.60:0,48,520	0/0:20,0:20:41.97:0,42,420	1/1:12,0:12:29.93:252,30,0	1/1:15,1:16:47.85:404,48,0	1/1:20,1:21:28.27:362,28,0	0/0:17,0:17:34.99:0,35,298	0/0:18,0:18:42.48:0,42,425	0/0:21,0:20:32.99:0,33,421	1/1:22,0:22:53.07:428,53,0	0/0:13,0:13:35.75:0,36,359	1/1:12,0:12:29.02:255,29,0	1/1:17,0:16:35.82:302,36,0	1/1:18,0:18:47.54:412,48,0	1/1:2,22:24:1.69:16,2,0	1/1:17,0:16:35.06:289,35,0	1/1:20,0:20:44.74:394,45,0	1/1:20,0:20:59.89:521,60,0	1/1:13,1:13:18.36:285,18,0	1/1:15,0:15:41.54:305,42,0
chr10	21249331	.	T	TA	1694.44	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-10.306;DP=586;FS=3.871;HRun=9;HaplotypeScore=55.9350;InbreedingCoeff=0.9921;MQ=76.46;MQ0=0;MQRankSum=-0.804;QD=19.70;ReadPosRankSum=2.187;VQSLOD=4.2756;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:86.90:0,87,749	1/1:0,9:9:24.06:266,24,0	0/0:11,0:11:26.99:0,27,233	0/0:13,0:14:24.32:0,24,187	1/1:6,24:30:46.06:710,46,0	0/0:18,0:18:44.96:0,45,383	0/0:12,0:12:29.98:0,30,256	0/0:28,0:28:53.95:0,54,469	0/0:19,0:19:44.98:0,45,391	0/0:27,0:27:65.97:0,66,570	0/0:18,0:18:44.98:0,45,390	0/0:11,0:11:32.98:0,33,283	0/0:26,0:26:59.96:0,60,521	0/0:24,0:24:62.97:0,63,547	1/1:7,19:26:22.07:472,22,0	1/1:7,14:21:16.06:405,16,0	0/0:21,0:21:53.98:0,54,469	0/0:26,0:26:71.98:0,72,625	0/0:20,1:21:20.79:0,21,406	0/0:23,0:23:53.97:0,54,469	0/0:16,0:16:47.97:0,48,413	0/0:23,0:23:59.97:0,60,521	0/0:21,0:21:56.97:0,57,491	0/0:19,0:19:44.98:0,45,391	0/0:12,0:12:26.99:0,27,234	0/0:24,0:24:62.98:0,63,547	0/0:38,0:39:99:0,104,883	0/0:11,0:11:26.97:0,27,234
chr10	21250331	.	CA	C	6190.78	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=9.429;DP=503;FS=3.509;HRun=11;HaplotypeScore=83.3951;InbreedingCoeff=0.9503;MQ=67.53;MQ0=5;MQRankSum=-1.311;QD=16.46;ReadPosRankSum=3.809;VQSLOD=5.7783;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,16:22:50.82:411,51,0	1/1:2,0:10:6.13:31,6,0	0/0:26,0:15:20.39:0,20,184	0/0:16,1:10:8.47:0,8,69	1/1:4,0:22:19.07:73,19,0	1/1:4,18:22:49.91:395,50,0	1/1:4,14:18:29.87:238,30,0	1/1:6,17:22:50.75:399,51,0	1/1:2,8:10:23.94:195,24,0	0/0:25,1:27:50.10:0,50,692	0/0:16,0:17:38.93:0,39,398	1/1:1,10:11:12.81:222,13,0	1/1:3,13:16:32.92:269,33,0	1/1:2,11:13:32.90:268,33,0	1/1:3,0:14:18.33:54,18,0	1/1:2,0:12:18.33:54,18,0	0/0:19,1:20:14.46:0,14,359	1/1:2,31:33:83.82:678,84,0	0/0:18,0:18:32.07:0,32,428	1/1:6,15:21:47.84:385,48,0	1/1:0,13:13:38.41:296,38,0	1/1:2,17:19:47.88:390,48,0	1/1:3,9:11:29.73:231,30,0	1/1:2,18:20:38.93:318,39,0	1/1:5,17:22:53.89:438,54,0	1/1:3,10:13:29.83:235,30,0	1/1:2,20:22:53.86:438,54,0	1/1:1,7:8:20.96:172,21,0
chr10	21252409	.	A	AG	3230.05	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-12.863;DP=625;FS=1.886;HRun=3;HaplotypeScore=92.1085;InbreedingCoeff=0.9933;MQ=71.35;MQ0=0;MQRankSum=-0.425;QD=33.65;ReadPosRankSum=1.189;VQSLOD=3.9831;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,105,1201	0/0:8,0:8:24.07:0,24,287	0/0:32,0:25:59.13:0,59,626	0/0:17,0:13:14.08:0,14,206	0/0:22,0:22:63.05:0,63,702	0/0:21,0:21:63.11:0,63,683	0/0:25,0:25:75.15:0,75,832	0/0:23,0:23:66.16:0,66,751	0/0:21,0:21:60.17:0,60,706	1/1:3,23:26:69.21:927,69,0	1/1:0,10:10:26.96:350,27,0	0/0:25,0:25:75.17:0,75,852	0/0:26,0:26:72.18:0,72,828	0/0:20,0:20:55.93:0,56,614	0/0:21,0:21:54.13:0,54,612	0/0:21,0:21:49.99:0,50,629	1/1:1,35:36:93.29:1280,93,0	0/0:40,0:40:99:0,111,1227	1/1:3,21:24:65.67:834,66,0	0/0:19,0:19:48.10:0,48,548	0/0:18,0:18:48.10:0,48,550	0/0:20,0:20:51.08:0,51,571	0/0:10,0:10:26.63:0,27,271	0/0:28,0:28:81.18:0,81,912	0/0:15,0:15:45.05:0,45,497	0/0:25,0:25:65.95:0,66,731	0/0:16,0:16:48.15:0,48,574	0/0:19,0:19:54.06:0,54,614
chr10	21253947	.	GCAACCACATGGTGGCTCA	G	17873.12	PASS	AB=0.846;AC=39;AF=0.780;AN=50;BaseQRankSum=10.403;DP=558;FS=6.356;HRun=0;HaplotypeScore=173.6817;InbreedingCoeff=0.7218;MQ=29.53;MQ0=122;MQRankSum=-3.477;QD=43.49;ReadPosRankSum=3.981;VQSLOD=3.1443;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,16:18:27.07:1137,27,0	1/1:4,5:7:12.04:609,12,0	./.	./.	1/1:7,22:25:21.07:800,21,0	1/1:11,8:15:15.05:762,15,0	1/1:4,7:9:12.04:533,12,0	1/1:19,8:24:20.94:558,21,0	1/1:9,3:5:3.01:152,3,0	0/0:20,0:17:42.14:0,42,2851	0/0:19,0:19:39.13:0,39,2842	1/1:7,4:10:3.01:152,3,0	1/1:11,13:19:24.08:1219,24,0	1/1:9,8:9:12.04:609,12,0	1/1:7,14:18:12.04:609,12,0	1/1:7,21:24:30.10:1524,30,0	0/0:46,0:24:51.17:0,51,3630	0/1:18,4:12:13.95:146,0,14	0/0:19,0:17:42.11:0,42,2901	1/1:3,20:22:42.14:2132,42,0	0/0:20,0:2:0.47:0,0,1	1/1:6,8:11:15.05:761,15,0	1/1:5,16:17:24.08:1135,24,0	./.	1/1:7,10:14:21.07:1052,21,0	1/1:8,20:23:60.21:2762,60,0	1/1:6,15:15:12.04:609,12,0	1/1:14,8:15:12.04:609,12,0
chr10	21254045	.	A	AT	2331.38	PASS	AB=1.000;AC=38;AF=0.679;AN=56;BaseQRankSum=6.521;DP=407;FS=9.580;HRun=7;HaplotypeScore=58.5678;InbreedingCoeff=0.3869;MQ=61.52;MQ0=19;MQRankSum=3.902;QD=8.21;ReadPosRankSum=2.131;VQSLOD=0.2422;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:34,0:29:37.61:181,38,0	1/1:0,5:5:15.05:181,15,0	0/0:18,0:6:1.47:0,1,16	0/0:12,0:5:0.28:0,0,5	1/1:12,20:31:77.98:857,78,0	0/1:12,0:12:15.15:40,0,15	0/1:9,0:8:2.15:34,0,2	0/1:26,0:25:58.48:115,0,58	1/1:12,0:12:2.83:52,3,0	0/0:20,0:19:53.74:0,54,494	0/0:19,0:19:48.34:0,48,503	1/1:9,0:9:16.75:53,17,0	1/1:11,0:11:14.70:61,15,0	1/1:10,0:9:16.27:56,16,0	1/1:2,7:9:21.06:253,21,0	1/1:5,4:9:17.91:185,18,0	0/0:28,0:27:66.82:0,67,644	1/1:15,0:14:7.38:67,7,0	0/0:26,0:24:54.05:0,54,511	1/1:12,0:12:24.75:81,25,0	0/1:5,0:5:12.30:12,0,14	1/1:3,0:3:5.07:15,5,0	0/1:5,0:5:5.61:6,0,24	1/1:6,0:4:6.90:23,7,0	1/1:15,0:15:4.99:51,5,0	1/1:18,0:18:7.98:76,8,0	0/1:13,0:12:26.39:38,0,26	1/1:14,0:12:20.93:73,21,0
chr10	21254052	.	T	TA	5902.01	PASS	AB=1.000;AC=43;AF=0.768;AN=56;BaseQRankSum=-5.663;DP=412;FS=4.365;HRun=9;HaplotypeScore=45.1463;InbreedingCoeff=0.8056;MQ=68.39;MQ0=10;MQRankSum=-0.217;QD=20.71;ReadPosRankSum=1.696;VQSLOD=5.3820;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,30:30:66.18:728,66,0	1/1:5,0:5:13.03:52,13,0	0/0:22,0:10:0.30:0,0,56	0/0:13,0:6:8.30:0,8,40	0/1:32,0:31:4.48:164,0,4	1/1:1,8:9:21.06:231,21,0	1/1:2,7:9:18.05:198,18,0	1/1:5,27:32:58.32:796,58,0	1/1:2,10:12:27.07:294,27,0	0/0:21,0:20:53.95:0,54,459	0/0:19,1:20:23.91:0,24,433	1/1:0,8:8:24.06:265,24,0	1/1:0,10:11:26.91:279,27,0	1/1:1,9:9:21.06:231,21,0	1/1:8,0:8:17.56:66,18,0	1/1:6,1:7:10.73:66,11,0	0/0:27,0:26:59.97:0,60,520	1/1:2,13:15:27.07:295,27,0	0/0:24,0:23:59.91:0,60,505	1/1:2,13:15:33.09:364,33,0	1/1:2,2:4:9.02:99,9,0	1/1:1,2:3:8.98:86,9,0	1/1:5,2:7:15:139,15,0	1/1:1,7:7:9.02:99,9,0	1/1:0,16:16:33.09:364,33,0	1/1:3,15:18:45.12:490,45,0	1/1:4,9:12:27.07:298,27,0	1/1:0,10:10:27.07:298,27,0
chr10	21254848	.	AGTGTGTGT	A	3526.72	PASS	AB=1.000;AC=41;AF=0.820;AN=50;BaseQRankSum=6.276;DP=578;FS=10.729;HRun=0;HaplotypeScore=150.7144;InbreedingCoeff=0.5146;MQ=64.15;MQ0=6;MQRankSum=-6.196;QD=8.38;ReadPosRankSum=0.523;VQSLOD=2.0736;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:26,7:35:18.05:370,18,0	1/1:8,0:12:3.01:56,3,0	./.	./.	1/1:11,0:17:0.89:2,1,0	1/1:17,7:23:6.02:148,6,0	1/1:21,5:26:9.02:199,9,0	./.	1/1:12,3:15:6.02:144,6,0	0/0:15,0:15:15.05:0,15,433	0/0:21,0:21:21.07:0,21,717	1/1:10,3:13:9.03:194,9,0	1/1:14,9:24:20.86:460,21,0	1/1:17,4:21:9.03:224,9,0	1/1:12,0:16:6.02:112,6,0	1/1:15,0:24:19.62:339,20,0	0/0:35,0:39:45.11:0,45,1537	1/1:23,0:22:3.01:46,3,0	0/0:22,0:22:12.04:0,12,376	1/1:11,5:17:12.04:243,12,0	0/1:31,0:30:43:91,0,43	1/1:8,4:12:7.84:124,8,0	1/1:15,4:19:6.02:129,6,0	1/1:22,5:28:3.01:46,3,0	1/1:14,9:23:6.49:150,6,0	1/1:20,0:19:2.96:20,3,0	1/1:7,7:15:18.06:414,18,0	1/1:6,0:6:2.90:16,3,0
chr10	21255568	.	AGTGTGT	A	6394.06	PASS	AB=0.689;AC=39;AF=0.722;AN=54;BaseQRankSum=-0.685;DP=546;FS=8.817;HRun=0;HaplotypeScore=135.9462;InbreedingCoeff=0.4211;MQ=52.64;MQ0=24;MQRankSum=-7.322;QD=15.75;ReadPosRankSum=2.772;VQSLOD=3.7114;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:15,20:34:66.04:296,0,66	1/1:3,1:8:20.77:258,21,0	0/0:34,0:15:0.47:0,0,1	./.	0/1:6,0:19:53.82:68,0,54	1/1:7,15:22:27.09:537,27,0	1/1:4,4:9:12.04:228,12,0	0/1:32,1:33:34.47:132,0,34	0/1:11,10:20:2.90:350,0,3	0/0:8,0:21:43.75:0,44,565	0/0:3,0:19:29.01:0,29,396	1/1:3,8:11:11.55:241,12,0	1/1:5,6:10:9.03:185,9,0	1/1:4,10:14:15.05:309,15,0	1/1:4,0:15:30.10:418,30,0	1/1:6,0:15:18.06:251,18,0	0/0:17,0:24:46.76:0,47,504	1/1:13,8:21:9.03:186,9,0	0/0:8,0:14:6.88:0,7,185	1/1:4,13:17:18.06:368,18,0	1/1:23,0:20:6:85,6,0	0/1:5,15:21:2.75:331,0,3	1/1:2,7:9:6.02:124,6,0	1/1:7,9:16:3.01:62,3,0	1/1:4,10:14:12.04:248,12,0	1/1:10,19:29:36.31:730,36,0	1/1:11,13:26:40.02:763,40,0	1/1:4,10:14:8.41:222,8,0
chr10	21255662	.	C	CAT	1530.84	PASS	AC=18;AF=0.346;AN=52;BaseQRankSum=-0.537;DP=331;FS=0.632;HRun=0;HaplotypeScore=52.1497;InbreedingCoeff=0.8347;MQ=71.59;MQ0=3;MQRankSum=0.327;QD=16.64;ReadPosRankSum=-0.916;VQSLOD=3.2209;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:51.12:0,51,600	1/1:7,0:8:5.03:31,5,0	1/1:10,0:6:2.68:11,3,0	0/0:18,0:6:2.98:0,3,22	1/1:13,0:14:5:13,5,0	0/0:21,0:21:51.16:0,51,643	0/0:11,0:11:18.04:0,18,212	0/0:47,0:47:99:0,102,1208	0/0:7,0:7:18.06:0,18,226	1/1:7,4:11:27.09:442,27,0	1/1:5,3:8:15.05:246,15,0	0/0:5,0:5:9.02:0,9,100	0/0:9,0:9:21.05:0,21,252	0/0:4,0:4:9.03:0,9,114	1/1:0,0:3:7.07:37,7,0	1/1:5,0:7:6.59:35,7,0	1/1:5,13:18:29.77:459,30,0	0/0:11,0:11:27.05:0,27,323	1/1:2,10:12:30.10:440,30,0	0/0:13,0:13:24.04:0,24,264	0/0:14,0:14:30.08:0,30,364	./.	0/0:3,0:3:9.03:0,9,113	./.	0/0:14,0:14:27.09:0,27,340	0/0:12,0:12:21.07:0,21,264	0/0:12,0:11:24.08:0,24,301	0/0:11,0:11:24.08:0,24,301
chr10	21255675	.	G	GTA	430.39	PASS	AB=1.000;AC=10;AF=0.185;AN=54;BaseQRankSum=4.790;DP=329;FS=0.000;HRun=0;HaplotypeScore=51.2881;InbreedingCoeff=0.6514;MQ=70.19;MQ0=4;MQRankSum=-1.872;QD=6.42;ReadPosRankSum=-1.150;VQSLOD=2.3017;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:50.93:0,51,619	1/1:1,4:5:6.02:97,6,0	0/0:10,0:3:2.76:0,3,19	0/1:21,0:10:6.96:7,0,27	1/1:11,2:13:14.08:193,14,0	0/0:22,0:22:54.12:0,54,667	0/0:10,0:10:27.09:0,27,349	0/0:41,0:42:99:0,102,1256	0/0:11,0:11:27.09:0,27,348	0/0:11,0:11:20.02:0,20,128	0/0:11,0:11:17.17:0,17,204	0/0:3,0:3:6.01:0,6,64	0/0:10,0:10:27.07:0,27,324	0/0:3,0:3:9.03:0,9,117	1/1:1,3:4:10.08:82,10,0	1/1:4,2:6:14.08:196,14,0	0/1:18,0:18:1.75:2,0,167	0/0:10,0:10:30.06:0,30,370	0/0:15,0:15:19.61:0,20,167	0/0:10,0:10:27.07:0,27,335	0/0:11,0:11:27.09:0,27,351	./.	0/0:5,0:5:15.05:0,15,194	0/0:2,0:2:3.01:0,3,39	0/0:16,0:16:42.09:0,42,500	0/0:9,0:9:21.06:0,21,260	0/0:17,0:16:45.15:0,45,581	0/0:11,0:11:24.06:0,24,294
chr10	21256066	.	ACAC	A	998.38	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.328;DP=712;FS=17.175;HRun=0;HaplotypeScore=97.0977;InbreedingCoeff=0.9217;MQ=75.89;MQ0=0;MQRankSum=-0.133;QD=43.41;ReadPosRankSum=-2.210;VQSLOD=3.0176;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,102,2326	0/0:9,0:9:27.08:0,27,564	0/0:19,0:19:54.16:0,54,1123	0/0:10,0:10:12.82:0,13,328	0/0:43,0:43:99:0,129,2833	0/0:24,0:24:72.20:0,72,1558	0/0:20,0:20:60.21:0,60,1395	0/0:37,0:37:99:0,111,2392	0/0:24,0:24:69.24:0,69,1579	0/0:37,0:37:99:0,111,2430	0/0:23,0:23:69.22:0,69,1557	0/0:33,0:33:96.27:0,96,2017	0/0:18,0:18:51.18:0,51,1186	0/0:24,0:24:72.25:0,72,1630	0/0:42,0:42:99:0,123,2768	0/0:39,0:39:99:0,114,2469	0/0:22,0:22:66.17:0,66,1460	0/0:18,0:18:54.19:0,54,1263	1/1:1,22:23:66.20:1093,66,0	0/0:26,0:26:78.27:0,78,1822	0/0:16,0:16:48.15:0,48,1067	0/0:29,0:29:87.27:0,87,2006	0/0:26,0:26:78.25:0,78,1792	0/0:27,0:27:81.27:0,81,1847	0/0:22,0:22:66.23:0,66,1537	0/0:35,0:35:99:0,105,2301	0/0:29,0:29:84.25:0,84,1848	0/0:3,0:3:9.03:0,9,213
chr10	21256585	.	GAAA	G	5744.28	PASS	AB=0.961;AC=32;AF=0.571;AN=56;BaseQRankSum=10.340;DP=566;FS=3.028;HRun=4;HaplotypeScore=143.7557;InbreedingCoeff=-0.4151;MQ=50.73;MQ0=21;MQRankSum=6.195;QD=10.80;ReadPosRankSum=6.090;VQSLOD=0.9398;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:21:20.40:234,0,20	0/1:10,0:10:57.71:58,0,154	0/0:20,0:6:8.60:0,9,139	0/0:13,0:7:21.07:0,21,424	0/1:28,0:28:99:227,0,120	1/1:22,0:21:8.97:291,9,0	0/1:22,0:19:99:298,0,111	0/1:38,0:33:99:111,0,846	1/1:22,0:21:32.80:278,33,0	0/1:18,0:18:78.88:229,0,79	0/1:15,0:15:99:113,0,126	0/1:28,0:29:30.80:283,0,31	1/1:20,0:20:28.51:305,29,0	1/1:19,0:18:44.33:303,44,0	0/1:5,0:15:2.03:2,0,120	0/1:21,0:21:47.27:242,0,47	0/1:17,0:17:1.10:222,0,1	0/1:9,0:8:84.33:89,0,84	0/1:10,10:16:99:184,0,108	0/1:22,0:21:96.90:234,0,97	1/1:19,0:18:32.84:301,33,0	0/1:18,0:18:31.36:370,0,31	0/1:16,0:16:29.26:120,0,29	0/1:25,0:25:45.35:268,0,45	0/1:23,1:24:56.14:245,0,56	0/1:9,21:30:99:343,0,187	1/1:20,0:20:31.99:286,32,0	0/1:11,0:10:15.90:110,0,16
chr10	21256590	.	GGAAGAAGAA	G	2055.25	PASS	AB=0.859;AC=26;AF=0.542;AN=48;BaseQRankSum=-0.170;DP=534;FS=0.000;HRun=0;HaplotypeScore=201.9971;InbreedingCoeff=0.2838;MQ=47.55;MQ0=22;MQRankSum=-0.312;QD=6.61;ReadPosRankSum=-0.837;VQSLOD=2.4829;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:18,1:20:24.78:144,0,25	0/0:10,0:10:15.52:0,16,460	./.	./.	0/0:20,0:29:29.93:0,30,369	1/1:14,8:21:9.03:234,9,0	./.	./.	1/1:12,9:20:9.03:233,9,0	0/0:18,0:18:14.88:0,15,423	0/0:14,0:15:20.96:0,21,391	0/1:18,10:28:9.01:226,0,9	0/1:12,4:16:37.07:142,0,37	1/1:15,3:17:2.74:79,3,0	0/0:14,0:14:14.95:0,15,172	0/1:22,0:22:67.76:68,0,77	0/0:15,0:15:3.01:0,3,53	1/1:11,0:10:3.01:73,3,0	0/0:20,0:17:12.04:0,12,348	1/1:13,7:19:12.04:236,12,0	1/1:15,0:14:6.02:160,6,0	1/1:14,0:14:1.15:3,1,0	1/1:13,5:17:6.74:75,7,0	0/0:23,0:23:2.22:0,2,32	0/1:17,7:24:0.16:236,0,0	0/1:29,0:30:59.93:60,0,315	1/1:11,10:21:6.02:154,6,0	1/1:10,0:9:0.77:91,1,0
chr10	21256965	.	GC	G	16587.96	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=0.577;DP=688;FS=8.236;HRun=7;HaplotypeScore=89.6763;InbreedingCoeff=0.9999;MQ=84.36;MQ0=0;MQRankSum=-9.653;QD=25.68;ReadPosRankSum=6.358;VQSLOD=4.6163;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,22:25:66.15:673,66,0	1/1:1,16:17:39.09:397,39,0	0/0:23,0:23:57.18:0,57,702	0/0:19,0:19:42.09:0,42,490	1/1:4,32:36:87.19:887,87,0	1/1:2,21:23:63.14:643,63,0	1/1:1,29:30:72.16:735,72,0	1/1:4,25:29:75.14:757,75,0	1/1:1,16:17:39.09:398,39,0	1/1:0,21:21:63.14:642,63,0	1/1:1,24:25:66.14:670,66,0	1/1:2,22:24:59.68:612,60,0	1/1:2,22:24:57.13:581,57,0	1/1:2,30:32:78.18:796,78,0	1/1:1,23:24:60.14:612,60,0	1/1:1,29:30:78.18:796,78,0	1/1:3,15:18:39.08:398,39,0	1/1:4,23:27:69.16:704,69,0	1/1:1,22:23:66.12:662,66,0	1/1:1,21:22:57.13:581,57,0	1/1:1,21:22:51.12:520,51,0	1/1:3,18:21:42.09:426,42,0	1/1:2,18:20:51.12:520,51,0	1/1:0,26:26:75.17:765,75,0	1/1:2,17:19:45.10:459,45,0	1/1:1,35:36:99:1040,102,0	1/1:2,27:29:69.16:704,69,0	1/1:5,21:26:60.13:612,60,0
chr10	21259344	.	TACACACACAC	T	6540.92	PASS	AC=40;AF=0.769;AN=52;BaseQRankSum=-0.399;DP=485;FS=9.969;HRun=0;HaplotypeScore=161.4352;InbreedingCoeff=0.6998;MQ=55.84;MQ0=9;MQRankSum=-5.693;QD=18.64;ReadPosRankSum=0.567;VQSLOD=3.5326;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:19,7:26:8.35:267,8,0	1/1:9,0:13:14.84:293,15,0	./.	0/0:23,0:8:0:0,0,0	1/1:11,0:17:6.49:140,6,0	1/1:7,5:13:9.91:250,10,0	1/1:19,7:27:15.05:418,15,0	0/0:17,0:17:0:0,0,0	1/1:8,6:15:12.04:338,12,0	0/0:7,0:9:14.64:0,15,289	0/0:11,0:15:17.73:0,18,267	1/1:13,5:20:8.44:228,8,0	1/1:9,6:16:18.05:454,18,0	1/1:10,9:20:18.06:525,18,0	1/1:7,0:11:6.49:140,6,0	1/1:9,0:16:12.04:279,12,0	0/0:17,0:29:46.92:0,47,764	1/1:6,5:11:9.03:268,9,0	0/0:7,0:13:22.42:0,22,299	1/1:12,4:16:9.03:268,9,0	./.	1/1:14,3:16:9.03:268,9,0	1/1:8,2:11:12.04:316,12,0	1/1:23,1:24:2.97:20,3,0	1/1:17,8:24:21.07:623,21,0	1/1:16,5:20:12.01:238,12,0	1/1:11,10:23:39.13:1117,39,0	1/1:7,1:7:3.01:89,3,0
chr10	21260088	.	CT	C	4423.80	PASS	AB=0.842;AC=17;AF=0.304;AN=56;BaseQRankSum=-4.309;DP=617;FS=8.123;HRun=3;HaplotypeScore=92.3026;InbreedingCoeff=-0.1426;MQ=67.70;MQ0=12;MQRankSum=3.579;QD=13.57;ReadPosRankSum=4.577;VQSLOD=3.3071;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:32,0:33:3.71:4,0,284	0/0:2,0:2:1.82:0,2,5	0/0:19,0:12:25.13:0,25,314	0/0:21,0:13:26.65:0,27,306	0/1:30,0:30:64.09:526,0,64	0/0:30,0:30:18.77:0,19,200	0/1:25,0:25:14.77:15,0,151	0/1:13,21:27:81.20:698,0,81	0/1:11,0:11:46.44:46,0,74	0/0:22,0:22:60.25:0,60,801	0/0:22,0:22:59.67:0,60,775	0/0:27,0:27:19.31:0,19,260	0/1:25,0:25:53.06:53,0,147	0/0:27,0:27:17.80:0,18,256	1/1:2,13:15:36.11:446,36,0	0/0:18,0:18:1.41:0,1,5	0/0:20,0:20:60.15:0,60,776	0/0:40,0:40:37.84:0,38,409	0/0:16,0:15:39.12:0,39,525	0/1:5,15:20:32.22:519,0,32	0/1:5,8:13:99:223,0,137	0/1:25,0:25:99:345,0,266	0/1:6,18:24:23.31:568,0,23	1/1:3,10:12:1.55:306,2,0	0/0:26,0:26:4.26:0,4,275	0/1:22,1:23:99:384,0,283	0/1:7,12:19:99:286,0,247	0/1:16,0:16:3.94:4,0,218
chr10	21260089	.	T	TTTC	7364.46	PASS	AB=0.680;AC=28;AF=0.500;AN=56;BaseQRankSum=-1.872;DP=630;FS=3.463;HRun=0;HaplotypeScore=100.5700;InbreedingCoeff=-0.1507;MQ=67.71;MQ0=12;MQRankSum=2.365;QD=14.55;ReadPosRankSum=5.604;VQSLOD=4.4773;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:14,18:33:33.14:33,0,114	1/1:1,0:4:3.01:47,3,0	0/0:18,0:12:24.46:0,24,310	0/0:22,0:13:26.65:0,27,313	1/1:6,25:35:72.22:1077,72,0	0/1:6,24:30:53.81:186,0,54	0/1:6,18:26:17.82:60,0,18	1/1:34,0:27:44.55:757,45,0	0/1:2,8:11:61.43:119,0,61	0/0:24,0:24:52.65:0,53,792	0/0:22,0:22:57.18:0,57,797	0/1:6,20:26:43.76:44,0,154	0/1:5,20:25:55.68:419,0,56	0/1:6,22:28:54.40:54,0,165	1/1:13,0:13:30.20:316,30,0	1/1:0,18:19:9.03:198,9,0	0/0:21,0:21:51.61:0,52,669	0/1:14,27:41:99:361,0,129	0/0:16,0:15:36.12:0,36,530	0/1:17,1:18:4.76:531,0,5	0/1:14,0:14:24.96:226,0,25	0/1:8,16:25:99:477,0,118	0/1:20,4:24:11.04:716,0,11	1/1:14,0:13:28.80:398,29,0	0/1:8,18:26:99:248,0,154	0/1:9,14:24:99:549,0,103	0/1:19,0:19:99:298,0,117	0/1:9,7:17:59.94:251,0,60
chr10	21261695	.	A	AT	1668.16	PASS	AB=0.758;AC=8;AF=0.143;AN=56;BaseQRankSum=0.674;DP=544;FS=15.991;HRun=10;HaplotypeScore=59.3810;InbreedingCoeff=0.6734;MQ=72.23;MQ0=0;MQRankSum=1.848;QD=17.20;ReadPosRankSum=-0.696;VQSLOD=2.4943;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:98.84:0,99,811	0/1:8,1:9:14.01:14,0,105	0/0:6,0:6:5.03:0,5,31	0/0:11,0:11:13.38:0,13,87	0/0:16,0:17:43.92:0,44,342	0/0:17,0:17:41.92:0,42,345	0/0:17,0:17:41.93:0,42,342	0/0:22,1:23:47.91:0,48,394	0/0:15,0:15:35.96:0,36,296	1/1:4,26:30:44.50:670,45,0	1/1:5,11:17:36.69:331,37,0	0/0:21,0:21:47.91:0,48,390	0/0:22,0:23:52.96:0,53,424	0/0:20,0:21:46.97:0,47,375	0/0:24,0:24:68.91:0,69,564	0/0:17,0:18:40.96:0,41,326	1/1:4,21:25:54.14:576,54,0	0/0:24,0:28:65.06:0,65,491	0/1:6,10:16:14.25:231,0,14	0/0:20,0:20:41.90:0,42,342	0/0:23,0:25:57.95:0,58,452	0/0:26,0:26:50.87:0,51,419	0/0:13,0:13:32.95:0,33,271	0/0:14,0:15:37.99:0,38,301	0/0:17,0:17:35.92:0,36,296	0/0:20,1:21:9.94:0,10,286	0/0:21,0:21:53.91:0,54,443	0/0:6,0:6:14.97:0,15,123
chr10	21263743	.	TAA	T	4408.84	PASS	AB=0.702;AC=36;AF=0.643;AN=56;BaseQRankSum=0.603;DP=485;FS=3.577;HRun=15;HaplotypeScore=66.1208;InbreedingCoeff=0.4996;MQ=71.34;MQ0=1;MQRankSum=0.161;QD=12.60;ReadPosRankSum=4.518;VQSLOD=3.9646;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,16:25:53.10:474,53,0	0/0:6,0:7:15.03:0,15,178	0/1:16,1:13:5.49:5,0,167	0/0:14,0:11:6.01:0,6,59	0/0:25,0:31:80.62:0,81,905	1/1:6,13:20:17.55:307,18,0	0/1:4,8:13:34.24:82,0,34	0/1:19,7:28:32.44:129,0,32	1/1:2,11:13:23.93:211,24,0	0/0:8,1:18:15.47:0,15,246	0/0:9,0:24:11.29:0,11,190	1/1:4,4:9:14.66:117,15,0	1/1:3,15:19:41.68:355,42,0	1/1:4,9:15:11.65:194,12,0	0/0:14,0:16:41.06:0,41,458	0/0:17,0:24:52.62:0,53,610	0/1:5,2:21:15.37:15,0,162	1/1:6,11:19:35:317,35,0	0/1:8,1:11:31.70:32,0,65	0/1:4,11:17:35.25:197,0,35	1/1:3,4:7:11.90:106,12,0	1/1:4,14:20:23.53:300,24,0	1/1:4,12:17:26.79:282,27,0	1/1:0,5:6:11.99:106,12,0	1/1:0,5:7:8.45:107,8,0	1/1:4,12:21:49.67:376,50,0	1/1:5,17:29:42.95:395,43,0	1/1:3,12:16:14.90:302,15,0
chr10	21265062	.	T	TA	19061.18	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-8.629;DP=550;FS=9.814;HRun=3;HaplotypeScore=46.5539;InbreedingCoeff=0.9913;MQ=76.71;MQ0=0;MQRankSum=-8.448;QD=37.23;ReadPosRankSum=4.187;VQSLOD=4.6856;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,25:26:72.24:1008,72,0	1/1:2,4:6:15.05:208,15,0	0/0:22,0:21:51.15:0,51,611	0/0:16,0:16:45.09:0,45,498	1/1:1,22:23:63.21:879,63,0	1/1:0,16:16:45.15:630,45,0	1/1:1,14:15:39.13:546,39,0	1/1:2,32:34:93.30:1277,93,0	1/1:1,11:12:33.11:462,33,0	1/1:1,20:21:60.20:840,60,0	1/1:1,13:14:39.13:546,39,0	1/1:0,17:17:51.17:713,51,0	1/1:0,20:20:54.18:756,54,0	1/1:0,14:14:36.12:504,36,0	1/1:3,22:25:63.21:882,63,0	1/1:0,24:24:69.23:966,69,0	1/1:2,22:24:60.20:840,60,0	1/1:3,21:24:43.34:820,43,0	1/1:4,16:20:51.14:675,51,0	1/1:2,20:22:51.17:714,51,0	1/1:1,10:11:30.10:420,30,0	1/1:0,18:18:48.12:650,48,0	1/1:0,25:25:72:1008,72,0	1/1:1,18:19:51.17:714,51,0	1/1:0,24:24:54.18:756,54,0	1/1:1,24:25:69.20:943,69,0	1/1:0,20:20:57.19:798,57,0	1/1:1,12:13:36.12:504,36,0
chr10	21267698	.	GTT	G	7899.28	PASS	AB=0.635;AC=41;AF=0.732;AN=56;BaseQRankSum=-11.958;DP=651;FS=0.758;HRun=13;HaplotypeScore=97.5760;InbreedingCoeff=0.5981;MQ=72.88;MQ0=1;MQRankSum=-1.054;QD=14.23;ReadPosRankSum=3.684;VQSLOD=4.0624;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,22:31:31.37:400,31,0	0/0:7,1:17:4.83:0,5,103	0/1:22,0:15:11.27:11,0,101	0/0:16,0:11:10.53:0,11,135	0/1:2,3:17:51.16:51,0,65	1/1:5,19:26:41.87:507,42,0	1/1:3,14:17:39.04:378,39,0	1/1:7,25:33:43.18:664,43,0	1/1:4,15:18:36.03:349,36,0	0/1:5,0:22:0.78:1,0,90	0/0:5,2:21:11.82:0,12,132	1/1:7,18:27:44.18:451,44,0	1/1:3,24:31:38.58:510,39,0	1/1:4,22:28:40.18:429,40,0	0/0:8,0:22:30.97:0,31,173	0/1:5,2:29:2.28:2,0,116	0/1:4,2:31:28.01:28,0,119	1/1:5,19:25:44.73:419,45,0	0/0:6,0:20:47.40:0,47,257	1/1:5,17:22:26.96:437,27,0	1/1:5,17:27:52.18:437,52,0	1/1:4,14:21:23.56:315,24,0	1/1:2,20:22:44.16:434,44,0	1/1:3,14:17:36.03:349,36,0	1/1:2,15:17:50.41:458,50,0	1/1:6,23:29:65.99:630,66,0	1/1:9,24:33:44.64:435,45,0	1/1:2,7:9:21.01:204,21,0
chr10	21268325	.	A	ACG	16508.17	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-15.046;DP=629;FS=1.442;HRun=0;HaplotypeScore=69.6105;InbreedingCoeff=0.9840;MQ=76.24;MQ0=3;MQRankSum=0.020;QD=40.76;ReadPosRankSum=1.128;VQSLOD=6.7772;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,34:40:96.33:1694,96,0	0/0:21,0:21:48.16:0,48,655	0/0:11,0:11:27.07:0,27,342	0/0:16,0:15:39.06:0,39,511	0/0:26,0:26:69.23:0,69,947	1/1:0,23:24:69.24:1223,69,0	1/1:3,26:31:72.14:1239,72,0	1/1:5,12:18:39.03:663,39,0	1/1:3,17:20:45.15:797,45,0	0/0:27,0:27:66.22:0,66,908	0/0:13,0:13:39.13:0,39,535	1/1:4,20:24:44.99:793,45,0	1/1:5,23:29:69.22:1185,69,0	1/1:2,24:27:63.22:1117,63,0	0/0:36,0:36:99:0,108,1467	0/0:25,0:25:72.24:0,72,989	0/0:32,0:32:90.28:0,90,1215	1/1:2,21:23:60.21:1064,60,0	0/0:17,0:17:42.14:0,42,576	1/1:3,10:13:30.10:501,30,0	1/1:3,31:34:66.23:1170,66,0	1/1:3,13:16:27.09:475,27,0	1/1:0,10:10:30.10:532,30,0	1/1:2,19:21:54.19:957,54,0	1/1:2,19:22:42.14:744,42,0	1/1:4,18:23:57.18:980,57,0	1/1:0,25:23:72.25:1267,72,0	1/1:0,3:3:6.02:106,6,0
chr10	21269025	.	GGTGAC	G	24436.51	PASS	AB=0.509;AC=43;AF=0.768;AN=56;BaseQRankSum=15.572;DP=636;FS=3.360;HRun=0;HaplotypeScore=206.1949;InbreedingCoeff=0.8971;MQ=88.23;MQ0=0;MQRankSum=-18.068;QD=53.94;ReadPosRankSum=3.622;VQSLOD=4.8573;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,13:17:30.10:622,30,0	1/1:0,9:9:27.09:575,27,0	0/0:37,0:37:99:0,102,2961	0/0:27,0:26:72.22:0,72,1992	1/1:0,19:19:36.12:766,36,0	1/1:0,20:20:51.18:1085,51,0	1/1:4,15:19:51.14:1005,51,0	1/1:5,27:32:81.26:1669,81,0	1/1:2,15:17:45.15:957,45,0	0/0:43,0:43:99:0,123,3803	0/0:18,0:18:48.16:0,48,1460	1/1:2,21:24:69.24:1448,69,0	1/1:4,18:22:63.22:1312,63,0	1/1:5,13:18:48.16:1010,48,0	1/1:3,23:27:72.24:1520,72,0	1/1:2,31:33:99:2086,99,0	0/0:38,0:38:99:0,105,3021	1/1:1,6:6:15.05:319,15,0	0/0:20,0:20:54.17:0,54,1614	1/1:0,34:34:90.31:1915,90,0	1/1:6,7:13:18.04:327,18,0	1/1:1,19:20:50.77:1085,51,0	1/1:1,22:23:62.96:1339,63,0	1/1:1,13:14:18.05:383,18,0	1/1:1,22:23:63.22:1340,63,0	0/1:1,26:27:12.72:1568,0,13	1/1:2,27:29:81.28:1722,81,0	1/1:0,6:6:18.06:383,18,0
chr10	21269078	.	A	AT	18413.64	PASS	AB=0.553;AC=43;AF=0.768;AN=56;BaseQRankSum=14.081;DP=627;FS=21.230;HRun=1;HaplotypeScore=209.4086;InbreedingCoeff=0.9232;MQ=86.90;MQ0=0;MQRankSum=-16.731;QD=38.12;ReadPosRankSum=3.214;VQSLOD=1.4289;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,15:16:36.08:512,36,0	1/1:2,11:13:36.12:534,36,0	0/0:37,0:38:99:0,99,1267	0/0:23,0:23:44.89:0,45,712	1/1:4,35:39:96.87:1406,97,0	1/1:0,25:25:75.08:1058,75,0	1/1:3,16:19:53.94:682,54,0	1/1:2,24:26:69.13:1033,69,0	1/1:1,20:21:60.07:842,60,0	0/0:18,0:18:54.18:0,54,701	0/0:15,0:15:45.13:0,45,568	1/1:3,27:30:84.18:1202,84,0	1/1:3,18:21:60.20:895,60,0	1/1:3,15:18:48.15:699,48,0	1/1:4,31:35:99:1441,102,0	1/1:2,24:26:75.13:1067,75,0	0/0:31,0:31:87.26:0,87,1113	1/1:0,6:5:15.05:224,15,0	0/0:19,0:19:45.11:0,45,555	1/1:3,30:33:90.15:1265,90,0	1/1:3,8:11:21.07:312,21,0	1/1:3,12:15:42.09:599,42,0	1/1:4,15:19:54:715,54,0	1/1:2,11:13:23.99:323,24,0	1/1:4,24:28:75.19:1085,75,0	0/1:5,21:26:2.78:882,0,3	1/1:4,33:37:99:1458,99,0	1/1:2,4:6:12.04:179,12,0
chr10	21269093	.	T	TAA	16616.70	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=4.020;DP=630;FS=10.052;HRun=8;HaplotypeScore=196.4634;InbreedingCoeff=0.9901;MQ=77.94;MQ0=0;MQRankSum=-9.426;QD=28.36;ReadPosRankSum=2.719;VQSLOD=2.9954;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,13:16:39.13:618,39,0	1/1:3,0:10:23.97:212,24,0	0/0:22,0:22:48.02:0,48,479	0/0:22,0:22:34.76:0,35,492	1/1:11,0:39:74.97:686,75,0	1/1:10,19:30:68.68:988,69,0	1/1:4,18:22:48.16:761,48,0	1/1:13,16:29:61.09:952,61,0	1/1:5,19:24:51.17:809,51,0	1/1:3,0:24:53.57:214,54,0	1/1:3,0:14:26.67:100,27,0	1/1:5,27:32:72.25:1142,72,0	1/1:7,16:26:60.16:910,60,0	1/1:4,12:16:33.10:495,33,0	1/1:4,2:40:99:1002,105,0	1/1:3,0:19:45.07:429,45,0	1/1:2,0:27:59.89:206,60,0	1/1:1,6:7:18.06:286,18,0	1/1:2,0:18:41.47:180,41,0	1/1:8,21:32:74.71:1089,75,0	1/1:3,10:14:24.07:359,24,0	1/1:5,11:16:33.11:523,33,0	1/1:4,12:17:39.13:599,39,0	1/1:1,15:16:27.05:400,27,0	1/1:3,23:26:69.24:1094,69,0	1/1:6,19:28:70.70:1005,71,0	1/1:8,28:36:84.07:1300,84,0	1/1:3,4:7:21:258,21,0
chr10	21269473	.	A	AG	23493.93	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-14.307;DP=792;FS=1.139;HRun=3;HaplotypeScore=65.5037;InbreedingCoeff=0.9997;MQ=82.95;MQ0=0;MQRankSum=-7.765;QD=35.76;ReadPosRankSum=5.605;VQSLOD=5.0701;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,36:37:93.31:1301,93,0	1/1:0,9:9:27.09:372,27,0	0/0:26,0:26:68.89:0,69,765	0/0:27,0:27:73.75:0,74,792	1/1:2,35:37:99:1412,105,0	1/1:0,22:22:63.21:882,63,0	1/1:2,21:23:51.17:714,51,0	1/1:3,35:38:99:1432,105,0	1/1:2,25:27:69.23:966,69,0	0/0:25,0:25:72.19:0,72,831	0/0:21,0:21:63.12:0,63,727	1/1:3,31:34:90.30:1260,90,0	1/1:3,38:41:93.26:1301,93,0	1/1:0,38:38:99:1554,111,0	1/1:2,42:44:99:1512,108,0	1/1:1,30:31:87.29:1218,87,0	0/0:16,0:15:48.15:0,48,576	1/1:2,11:13:33.11:462,33,0	0/0:20,0:20:57.05:0,57,662	1/1:1,33:34:90.15:1191,90,0	1/1:3,30:33:78.26:1092,78,0	1/1:1,28:29:78.26:1091,78,0	1/1:2,22:24:66.14:898,66,0	1/1:2,38:40:90.30:1260,90,0	1/1:0,22:22:60.13:816,60,0	1/1:2,27:29:47.48:1059,47,0	1/1:1,32:33:81.27:1134,81,0	1/1:2,17:19:42.11:566,42,0
chr10	21271322	.	T	TTTTCCCCCAATTTC	81771.62	PASS	AB=0.596;AC=43;AF=0.768;AN=56;BaseQRankSum=-9.873;DP=624;FS=8.331;HRun=0;HaplotypeScore=192.6573;InbreedingCoeff=0.8871;MQ=84.92;MQ0=0;MQRankSum=-17.422;QD=173.61;ReadPosRankSum=3.661;VQSLOD=4.9542;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,14:24:60.21:4099,60,0	1/1:6,7:16:42.14:2680,42,0	0/0:30,0:30:84.16:0,84,3277	0/0:25,0:25:63.22:0,63,2204	1/1:8,13:21:54.19:3404,54,0	1/1:8,19:28:78.27:5246,78,0	1/1:9,13:24:66.23:4380,66,0	1/1:16,3:21:60.21:3135,60,0	1/1:6,10:21:45.15:2889,45,0	0/0:29,0:28:87.28:0,87,3499	0/0:22,0:22:66.21:0,66,2655	1/1:7,17:25:66.23:4426,66,0	1/1:4,26:33:90.31:6279,90,0	1/1:2,12:16:42.14:2674,42,0	1/1:7,19:29:78.27:5307,78,0	1/1:7,21:30:81.28:5700,81,0	0/0:32,0:32:96.32:0,96,4028	1/1:2,4:7:18.06:1270,18,0	0/0:15,0:15:42.14:0,42,1858	1/1:8,14:26:72.13:4389,72,0	1/1:3,6:9:21.07:1494,21,0	1/1:4,20:25:75.26:5221,75,0	1/1:4,11:19:51.18:3408,51,0	1/1:9,4:14:36.12:2015,36,0	1/1:7,13:24:57.20:3990,57,0	0/1:10,17:31:42.54:5245,0,43	1/1:5,13:24:54.19:3871,54,0	1/1:0,3:3:9.03:650,9,0
chr10	21275283	.	G	GA	2688.13	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=-9.220;DP=625;FS=10.138;HRun=8;HaplotypeScore=62.1490;InbreedingCoeff=0.9268;MQ=73.72;MQ0=0;MQRankSum=0.030;QD=23.79;ReadPosRankSum=-0.523;VQSLOD=3.7485;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:68.98:0,69,614	0/0:14,0:14:39.02:0,39,357	0/0:20,0:19:39.69:0,40,343	0/1:16,0:15:0.40:0,0,162	0/0:29,0:29:72:0,72,655	0/0:33,0:33:87.04:0,87,796	0/0:22,0:22:57.03:0,57,522	0/0:23,0:23:57.03:0,57,522	0/0:22,0:22:60.01:0,60,540	1/1:2,30:32:90.27:1039,90,0	1/1:3,19:22:51.11:574,51,0	0/0:28,0:28:66.01:0,66,600	0/0:25,0:25:72.04:0,72,659	0/0:19,0:19:51:0,51,461	0/0:23,0:23:66.03:0,66,604	0/0:19,0:19:48:0,48,435	1/1:1,30:31:81.24:935,81,0	0/0:19,0:19:53.98:0,54,486	1/1:3,9:12:27.06:300,27,0	0/0:33,0:33:96.05:0,96,879	0/0:14,0:14:33.01:0,33,302	0/0:12,0:13:29.04:0,29,253	0/0:32,0:32:81.03:0,81,741	0/0:11,0:11:30.02:0,30,275	0/0:26,0:26:72.02:0,72,655	0/0:21,0:21:45.01:0,45,409	0/0:32,0:31:87.03:0,87,792	0/0:10,0:10:30.02:0,30,275
chr10	21277215	.	CAAACAAAT	C	5105.52	PASS	AB=1.000;AC=24;AF=0.429;AN=56;BaseQRankSum=-8.164;DP=756;FS=16.041;HRun=0;HaplotypeScore=228.5699;InbreedingCoeff=-0.1686;MQ=68.94;MQ0=1;MQRankSum=-4.149;QD=9.27;ReadPosRankSum=-2.862;VQSLOD=2.1686;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:32,0:32:99:103,0,1835	1/1:1,6:7:6.02:163,6,0	0/0:35,0:31:70.91:0,71,1488	0/0:22,0:20:40.52:0,41,967	1/1:0,19:20:40.77:664,41,0	0/1:32,0:32:86.85:87,0,2012	0/1:26,0:26:99:201,0,1258	0/1:31,0:31:99:367,0,689	0/1:28,0:28:41.72:42,0,1968	0/0:29,0:29:84.18:0,84,914	0/0:18,0:18:39:0,39,411	0/1:32,0:32:53.88:54,0,2071	0/1:33,0:33:82.44:82,0,1779	0/1:23,0:23:7.06:7,0,1741	1/1:2,25:27:39.13:1029,39,0	1/1:5,33:38:66.02:1793,66,0	0/0:47,0:47:99:0,135,1494	0/1:27,0:27:99:113,0,1477	0/0:25,0:25:69.12:0,69,802	0/1:23,0:23:99:119,0,1002	0/1:31,0:31:99:106,0,2030	0/1:25,0:25:11.88:12,0,1694	0/1:30,0:30:50.86:51,0,1740	0/1:44,0:44:68.15:68,0,2763	0/1:15,0:15:29.95:30,0,1065	0/0:18,0:18:23.05:0,23,1445	0/1:27,0:27:14.71:15,0,2186	0/0:10,0:10:30.09:0,30,861
chr10	21277219	.	CAAAT	C	5313.16	PASS	AB=0.988;AC=29;AF=0.518;AN=56;BaseQRankSum=-0.439;DP=759;FS=8.631;HRun=0;HaplotypeScore=169.1968;InbreedingCoeff=-0.4905;MQ=67.10;MQ0=1;MQRankSum=0.305;QD=7.70;ReadPosRankSum=-3.224;VQSLOD=2.8961;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:33:99:182,0,804	1/1:7,0:7:6.02:67,6,0	0/0:38,0:34:83.31:0,83,1222	0/0:21,0:18:38.68:0,39,623	1/1:19,0:20:40.61:329,41,0	0/1:29,0:29:99:109,0,909	0/1:28,0:28:99:222,0,519	0/1:32,0:32:99:386,0,207	0/1:29,0:29:99:100,0,842	0/1:30,0:30:99:344,0,191	0/1:17,0:17:2.30:228,0,2	0/1:33,1:34:99:165,0,888	0/1:29,1:30:99:216,0,762	0/1:22,1:23:85.58:86,0,779	1/1:26,0:26:39.03:422,39,0	1/1:35,0:35:66.14:741,66,0	0/1:48,0:48:99:615,0,191	0/1:27,0:27:99:120,0,600	0/1:26,0:26:99:182,0,168	0/1:20,0:20:99:119,0,428	0/1:34,0:34:99:170,0,871	0/1:24,0:24:48.87:49,0,743	0/1:28,1:29:99:129,0,787	0/1:44,0:44:99:114,0,1160	0/1:14,1:15:86.07:86,0,470	0/1:18,1:19:58.25:58,0,613	0/1:31,0:31:75.73:76,0,979	0/0:10,0:10:29.87:0,30,391
chr10	21277223	.	TAAAC	T	4555.90	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=-1.816;DP=777;FS=0.365;HRun=0;HaplotypeScore=180.2242;InbreedingCoeff=0.6110;MQ=65.05;MQ0=1;MQRankSum=-1.933;QD=21.39;ReadPosRankSum=1.617;VQSLOD=4.3608;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:60.21:0,60,1367	1/1:6,0:6:5.99:51,6,0	0/0:36,0:32:36.07:0,36,631	0/0:24,0:21:24.54:0,25,391	0/1:22,0:22:25.04:128,0,25	0/0:32,0:32:66.14:0,66,1508	0/0:30,0:30:49.51:0,50,988	0/0:32,0:32:38.56:0,39,619	0/0:28,0:28:63.22:0,63,1443	1/1:10,21:31:63.20:980,63,0	1/1:2,13:15:38.96:523,39,0	0/0:33,0:33:42.12:0,42,1505	0/0:30,0:30:2.38:0,2,1267	0/0:25,0:25:28.34:0,28,1270	0/1:28,0:28:20.53:260,0,21	0/1:37,0:37:20.06:476,0,20	1/1:15,35:50:93.31:1490,93,0	0/0:27,0:27:54.13:0,54,1084	1/1:8,16:24:48.05:648,48,0	0/0:19,0:19:33.11:0,33,751	0/0:36,0:36:73.58:0,74,1562	0/0:27,0:27:60.89:0,61,1290	0/0:27,0:27:31.32:0,31,1315	0/0:44,0:44:93.79:0,94,2032	0/0:16,0:16:0.66:0,1,760	0/0:21,0:21:27.84:0,28,1099	0/0:34,0:34:75.88:0,76,1675	0/0:10,0:10:29.99:0,30,594
chr10	21279760	.	AGT	A	16634.69	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=10.164;DP=539;FS=3.390;HRun=0;HaplotypeScore=86.8288;InbreedingCoeff=0.9909;MQ=79.09;MQ0=0;MQRankSum=-4.142;QD=39.70;ReadPosRankSum=3.457;VQSLOD=7.0991;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,35:35:99:1514,99,0	1/1:0,9:9:21.07:321,21,0	0/0:12,0:12:33.11:0,33,596	0/0:16,0:16:48.08:0,48,841	1/1:1,13:14:33.11:505,33,0	1/1:0,27:27:78.26:1193,78,0	1/1:1,25:26:63.21:964,63,0	1/1:1,16:17:48.13:674,48,0	1/1:0,21:21:57.19:872,57,0	0/0:19,0:19:57.19:0,57,1072	0/0:17,0:17:48.15:0,48,883	1/1:0,14:14:36.12:551,36,0	1/1:0,16:16:42.14:642,42,0	1/1:1,27:28:75.25:1146,75,0	1/1:1,22:23:57.19:872,57,0	1/1:0,15:15:42.14:643,42,0	0/0:40,0:40:99:0,117,2155	1/1:0,21:21:60.20:918,60,0	0/0:16,0:16:45.15:0,45,851	1/1:0,16:16:39.09:570,39,0	1/1:0,30:30:69.23:1056,69,0	1/1:1,18:19:42.14:642,42,0	1/1:1,7:8:24.08:367,24,0	1/1:2,14:16:30.10:459,30,0	1/1:0,14:14:42.14:643,42,0	1/1:2,21:23:11.24:890,11,0	1/1:0,18:18:51.17:780,51,0	1/1:0,9:9:27.09:413,27,0
chr10	21280945	.	T	TA	12705.58	PASS	AB=0.571;AC=43;AF=0.768;AN=56;BaseQRankSum=-12.267;DP=668;FS=6.390;HRun=10;HaplotypeScore=61.0816;InbreedingCoeff=0.9020;MQ=77.14;MQ0=0;MQRankSum=-2.488;QD=23.88;ReadPosRankSum=1.616;VQSLOD=5.7035;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,35:42:93.23:989,93,0	0/1:4,12:16:13.20:284,0,13	0/0:19,0:20:22.42:0,22,256	0/0:14,0:13:20.83:0,21,163	1/1:6,16:22:27.28:464,27,0	1/1:3,21:25:60.10:627,60,0	1/1:7,21:28:57.14:608,57,0	1/1:8,31:39:93.18:965,93,0	1/1:4,11:15:27.07:288,27,0	0/0:29,0:29:71.87:0,72,589	0/0:24,0:24:62.89:0,63,514	1/1:6,19:25:51.13:544,51,0	1/1:4,23:27:72.18:765,72,0	1/1:4,24:28:72.18:765,72,0	1/1:4,31:35:45.19:881,45,0	1/1:3,16:19:48.12:512,48,0	0/0:25,0:25:59.89:0,60,489	1/1:3,12:15:36.09:384,36,0	0/0:23,0:24:52.95:0,53,422	1/1:7,19:26:48.08:500,48,0	1/1:3,16:19:45.11:480,45,0	1/1:1,19:20:54.09:559,54,0	1/1:3,16:19:40.34:419,40,0	1/1:3,18:21:45.11:477,45,0	1/1:4,13:17:30.08:320,30,0	1/1:2,28:30:59.52:819,60,0	1/1:6,28:34:72.18:768,72,0	1/1:0,10:10:27.07:288,27,0
chr10	21282038	.	CATAT	C	10345.87	PASS	AB=0.781;AC=40;AF=0.714;AN=56;BaseQRankSum=3.025;DP=465;FS=1.982;HRun=0;HaplotypeScore=97.8994;InbreedingCoeff=0.7578;MQ=65.45;MQ0=7;MQRankSum=-1.325;QD=26.53;ReadPosRankSum=1.076;VQSLOD=4.6748;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,28:38:48.16:819,48,0	1/1:2,8:10:15.05:256,15,0	0/0:6,0:4:2.74:0,3,12	0/1:16,0:9:5.55:6,0,14	1/1:8,19:29:33.11:540,33,0	0/1:4,13:18:54.12:263,0,54	1/1:7,9:16:21.07:358,21,0	1/1:6,37:43:99:1566,108,0	1/1:2,16:18:33.11:563,33,0	0/0:12,0:11:23.86:0,24,475	0/0:12,0:12:24.08:0,24,551	1/1:2,6:8:15.05:242,15,0	1/1:2,6:8:15.05:256,15,0	1/1:3,11:15:33.10:539,33,0	1/1:1,12:13:27.09:460,27,0	1/1:9,12:21:36.04:546,36,0	0/0:21,0:20:48.16:0,48,1038	1/1:4,13:17:36.12:614,36,0	0/0:7,0:7:15.04:0,15,286	0/0:10,0:10:14.84:0,15,314	0/0:3,0:4:8.80:0,9,111	1/1:2,5:8:12.03:181,12,0	1/1:2,11:15:36.11:564,36,0	1/1:4,14:18:30.10:512,30,0	1/1:6,17:24:39.13:642,39,0	1/1:2,15:18:35.38:729,35,0	1/1:10,16:27:38.86:641,39,0	1/1:6,3:9:3.01:51,3,0
chr10	21282106	.	TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCACC	T	2013.64	PASS	AB=1.000;AC=8;AF=0.148;AN=54;BaseQRankSum=6.339;DP=452;FS=15.455;HRun=0;HaplotypeScore=321.4984;InbreedingCoeff=0.6718;MQ=45.70;MQ0=26;MQRankSum=1.130;QD=28.77;ReadPosRankSum=0.320;VQSLOD=0.7604;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:25:41.95:0,42,3112	0/0:5,0:5:12.04:0,12,807	0/0:8,0:2:3.01:0,3,69	0/0:15,0:5:9.03:0,9,204	0/0:17,0:16:22.86:0,23,1409	0/0:19,0:18:26.21:0,26,2028	0/0:15,0:14:30.10:0,30,1878	0/0:26,0:25:54.17:0,54,2702	0/0:21,0:20:39.61:0,40,3712	1/1:7,10:14:28.05:878,28,0	1/1:4,12:16:16.56:546,17,0	0/0:14,0:14:30.08:0,30,2615	0/0:17,0:17:41.49:0,41,3107	0/0:16,0:16:27.98:0,28,2468	0/0:13,0:13:30.57:0,31,2031	0/0:16,0:16:36.12:0,36,2698	0/1:10,0:10:99:194,0,268	0/0:21,0:21:38.31:0,38,3428	0/1:10,0:9:2.39:79,0,2	1/1:16,1:14:12.49:464,12,0	./.	0/0:8,0:8:9.03:0,9,894	0/0:16,0:16:9.03:0,9,890	0/0:20,0:16:38.97:0,39,2753	0/0:22,0:20:17.51:0,18,1454	0/0:21,0:20:33.11:0,33,3187	0/0:20,0:20:42.14:0,42,2859	0/0:15,0:10:22.50:0,22,1588
chr10	21282136	.	TCACC	T	1039.10	PASS	AB=0.979;AC=13;AF=0.241;AN=54;BaseQRankSum=6.586;DP=353;FS=20.978;HRun=0;HaplotypeScore=83.1658;InbreedingCoeff=0.6115;MQ=68.72;MQ0=14;MQRankSum=-2.914;QD=12.08;ReadPosRankSum=-0.971;VQSLOD=1.1972;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:19:42.92:0,43,586	0/0:3,0:3:9.03:0,9,154	0/0:14,0:6:16.92:0,17,243	0/0:36,0:15:3.34:0,3,288	0/0:14,0:13:29.76:0,30,428	0/0:16,0:16:45.11:0,45,753	0/0:13,0:13:36.02:0,36,518	0/0:22,0:21:55.91:0,56,749	0/1:13,0:12:3.32:3,0,432	1/1:10,0:10:30.08:401,30,0	1/1:12,0:12:6.49:73,6,0	0/0:8,0:8:1.45:0,1,335	0/0:14,0:14:7.65:0,8,376	0/1:12,0:12:9.22:9,0,488	0/0:11,0:11:24.78:0,25,333	0/0:12,0:12:15.51:0,16,383	1/1:8,0:8:17.70:193,18,0	0/0:16,0:16:16.13:0,16,580	1/1:0,6:6:18.03:242,18,0	1/1:10,0:10:15.05:226,15,0	./.	0/0:7,0:7:21.07:0,21,328	0/0:6,0:6:18.06:0,18,310	0/1:14,1:13:61.57:62,0,305	0/0:15,0:13:32.74:0,33,549	0/0:11,0:11:33.11:0,33,578	0/0:11,0:11:29.12:0,29,425	0/0:12,0:9:24.05:0,24,418
chr10	21282336	.	C	CT	12381.06	PASS	AB=0.545;AC=39;AF=0.696;AN=56;BaseQRankSum=-13.162;DP=613;FS=3.725;HRun=7;HaplotypeScore=57.5906;InbreedingCoeff=0.9116;MQ=81.79;MQ0=0;MQRankSum=-2.261;QD=29.13;ReadPosRankSum=3.111;VQSLOD=5.5266;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,18:18:45.14:544,45,0	1/1:0,9:9:27.08:326,27,0	0/0:30,0:30:41.53:0,42,518	0/0:16,0:15:10.95:0,11,173	1/1:5,28:33:84.21:995,84,0	1/1:3,28:31:72.22:870,72,0	1/1:4,24:29:65.93:754,66,0	1/1:6,29:35:84.20:966,84,0	0/1:3,15:18:12.74:426,0,13	0/0:25,0:25:54.07:0,54,521	0/0:28,0:28:69.09:0,69,661	1/1:1,22:23:60.18:724,60,0	1/1:1,16:17:45.14:544,45,0	1/1:2,15:17:39.12:471,39,0	1/1:0,31:31:75.20:891,75,0	1/1:0,15:15:39.12:471,39,0	0/0:27,0:27:72.07:0,72,686	1/1:2,9:11:27.08:326,27,0	0/0:25,0:25:63.08:0,63,598	0/0:21,0:21:60.09:0,60,579	0/0:16,0:16:48.06:0,48,457	1/1:3,16:19:21.59:468,22,0	1/1:3,18:21:51.07:583,51,0	1/1:1,23:24:69.21:833,69,0	1/1:1,20:21:51.09:598,51,0	1/1:3,24:27:72.22:869,72,0	1/1:2,15:17:39.12:471,39,0	1/1:0,9:9:21.06:254,21,0
chr10	21284407	.	AT	A	14954.43	PASS	AB=1.000;AC=53;AF=0.946;AN=56;BaseQRankSum=-0.645;DP=666;FS=16.396;HRun=9;HaplotypeScore=72.1932;InbreedingCoeff=0.8078;MQ=79.65;MQ0=1;MQRankSum=-7.429;QD=23.11;ReadPosRankSum=6.553;VQSLOD=3.6282;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,28:32:78.03:714,78,0	1/1:2,6:8:18:165,18,0	0/1:15,0:15:0.82:1,0,285	0/0:19,0:19:14.85:0,15,367	1/1:2,32:34:87.04:796,87,0	1/1:1,18:19:51.03:467,51,0	1/1:4,15:19:16.36:331,16,0	1/1:4,27:31:81:731,81,0	1/1:4,20:24:57.03:521,57,0	1/1:2,18:20:54.02:494,54,0	1/1:1,18:19:48.01:439,48,0	1/1:2,26:28:72.03:659,72,0	1/1:0,33:33:90.04:824,90,0	1/1:1,25:26:55.25:639,55,0	1/1:3,25:28:72.03:659,72,0	1/1:4,23:27:63.03:577,63,0	1/1:2,25:26:69.04:632,69,0	1/1:2,16:18:48.03:439,48,0	1/1:2,22:25:68.05:603,68,0	1/1:0,25:25:72.04:658,72,0	1/1:3,16:19:45.02:412,45,0	1/1:1,22:22:57.03:522,57,0	1/1:0,32:32:87.05:796,87,0	1/1:0,25:25:72.04:659,72,0	1/1:0,19:19:54.03:494,54,0	1/1:5,30:35:90.02:817,90,0	1/1:1,28:29:78.04:714,78,0	1/1:0,7:7:21.01:192,21,0
chr10	21284699	.	T	TGA	6000.92	PASS	AB=0.573;AC=18;AF=0.321;AN=56;BaseQRankSum=-7.515;DP=756;FS=16.006;HRun=0;HaplotypeScore=170.4576;InbreedingCoeff=0.8226;MQ=70.48;MQ0=4;MQRankSum=0.793;QD=24.70;ReadPosRankSum=2.544;VQSLOD=5.0407;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:74.96:0,75,871	0/1:2,6:8:21.36:179,0,21	0/0:48,0:30:25.61:0,26,279	0/0:55,0:44:45.49:0,45,623	1/1:6,27:33:23.63:870,24,0	0/0:21,0:21:42.13:0,42,509	0/0:26,0:26:54:0,54,632	0/0:30,0:31:59.93:0,60,672	0/0:25,0:26:57.85:0,58,653	1/1:9,11:20:13.71:556,14,0	1/1:5,9:14:15.05:242,15,0	0/0:28,0:30:74.85:0,75,849	0/0:29,0:29:81.18:0,81,950	0/0:31,0:30:57.17:0,57,688	1/1:4,24:29:17.78:770,18,0	1/1:6,25:31:54.18:871,54,0	1/1:7,16:24:8.75:638,9,0	0/0:12,0:12:22.59:0,23,244	1/1:10,12:21:5.60:506,6,0	0/1:6,17:23:2.36:540,0,2	1/1:9,28:39:54.16:828,54,0	0/0:24,0:24:51.16:0,51,619	0/0:22,0:22:60.18:0,60,727	0/0:47,0:47:45.52:0,46,677	0/0:17,0:19:47.98:0,48,560	0/0:29,0:29:68.66:0,69,769	0/0:19,0:20:53.86:0,54,596	0/0:5,0:5:9.03:0,9,109
chr10	21284745	.	AGC	A	232.71	PASS	AB=0.927;AC=11;AF=0.196;AN=56;BaseQRankSum=5.716;DP=790;FS=8.935;HRun=0;HaplotypeScore=257.0150;InbreedingCoeff=-0.2386;MQ=56.80;MQ0=42;MQRankSum=-3.478;QD=0.90;ReadPosRankSum=-3.673;VQSLOD=0.3537;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:29.80:0,30,240	0/0:10,0:10:7.10:0,7,211	0/0:60,0:23:39.03:0,39,722	0/0:82,1:29:37.05:0,37,599	0/1:19,2:21:23.67:24,0,306	0/1:16,0:17:26:26,0,128	0/1:24,0:22:2.64:3,0,211	0/0:39,0:39:37.02:0,37,551	0/1:23,1:21:1.01:1,0,250	0/1:22,0:22:13.79:14,0,649	0/0:14,0:12:10.06:0,10,124	0/0:30,0:30:41.16:0,41,546	0/0:29,0:28:7.69:0,8,321	0/0:32,0:31:7.54:0,8,235	0/1:28,5:31:8.34:8,0,388	0/1:17,12:28:99:218,0,465	0/0:23,0:23:39.56:0,40,678	0/1:14,0:14:7.69:8,0,175	0/0:30,0:30:57.55:0,58,1033	0/1:36,2:38:31.04:31,0,458	0/0:23,0:23:22.08:0,22,362	0/0:21,0:20:14.49:0,14,216	0/0:20,0:20:12.90:0,13,215	0/0:32,0:32:29.50:0,29,240	0/0:24,0:22:32.69:0,33,326	0/1:31,0:30:16.16:16,0,388	0/0:26,0:25:3.71:0,4,259	0/1:5,1:6:18.77:19,0,69
chr10	21284751	.	AGC	A	4743.72	PASS	AB=0.915;AC=34;AF=0.607;AN=56;BaseQRankSum=-1.946;DP=811;FS=9.350;HRun=0;HaplotypeScore=241.2873;InbreedingCoeff=0.5193;MQ=53.10;MQ0=49;MQRankSum=0.947;QD=8.98;ReadPosRankSum=-0.268;VQSLOD=3.2370;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:30,2:32:40.69:318,41,0	0/0:10,2:12:6.23:0,6,72	0/0:61,0:18:23.29:0,23,243	0/0:102,0:22:33.14:0,33,263	0/1:22,2:23:45.82:46,0,85	1/1:12,6:18:19.07:151,19,0	1/1:22,3:23:11.63:242,12,0	0/1:30,7:36:37.46:554,0,37	1/1:20,1:18:15.43:218,15,0	0/0:21,0:21:16.79:0,17,408	0/0:15,0:13:5.26:0,5,27	1/1:28,1:29:34.38:281,34,0	1/1:27,0:26:31.61:328,32,0	1/1:34,1:34:32.32:265,32,0	0/1:27,3:28:24.89:25,0,103	0/1:32,0:31:99:268,0,178	0/0:23,1:24:30.21:0,30,521	1/1:14,0:14:30.05:213,30,0	0/0:28,0:28:22.53:0,23,397	0/1:37,0:37:43.58:44,0,249	0/0:20,0:20:11.82:0,12,166	1/1:23,0:22:20.80:170,21,0	1/1:22,1:23:29.94:247,30,0	1/1:32,1:33:22.53:208,23,0	1/1:22,3:23:23.15:180,23,0	0/1:24,7:30:1.91:470,0,2	1/1:23,1:23:50.17:389,50,0	1/1:6,2:7:9.54:126,10,0
chr10	21284757	.	A	AGC	3080.76	PASS	AB=0.992;AC=30;AF=0.536;AN=56;BaseQRankSum=-2.589;DP=837;FS=0.395;HRun=0;HaplotypeScore=247.8827;InbreedingCoeff=-0.5341;MQ=48.26;MQ0=59;MQRankSum=3.073;QD=4.73;ReadPosRankSum=2.129;VQSLOD=2.6951;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:36,0:36:39.11:109,0,39	0/1:12,0:12:7.23:44,0,7	0/0:69,0:13:25.07:0,25,208	0/0:117,0:19:21.49:0,21,193	0/1:23,0:22:29.33:29,0,41	0/1:19,1:20:85.54:100,0,86	0/1:24,0:22:0.54:85,0,1	0/1:37,0:36:99:113,0,297	0/1:22,0:19:30.10:159,0,30	0/1:20,0:20:54.78:55,0,263	0/1:15,0:13:6.37:16,0,6	0/1:29,2:31:30.90:303,0,31	0/1:28,0:27:86.04:207,0,86	1/1:34,0:33:5.46:130,5,0	0/1:30,0:28:27.64:70,0,28	0/1:33,0:32:99:113,0,141	0/1:26,0:27:59.67:60,0,161	0/1:13,0:13:19.79:162,0,20	0/1:26,0:25:99:214,0,130	0/1:36,1:37:25.54:173,0,26	1/1:19,0:19:3.26:28,3,0	0/1:23,0:22:21.60:116,0,22	0/1:22,0:22:1.43:107,0,1	1/1:30,1:31:23.58:194,24,0	0/1:23,0:21:21.86:94,0,22	0/1:33,0:32:99:253,0,206	1/1:23,0:22:23.07:263,23,0	0/1:9,0:7:34.09:45,0,34
chr10	21284767	.	A	AGC	1361.11	PASS	AB=0.823;AC=14;AF=0.250;AN=56;BaseQRankSum=2.908;DP=889;FS=19.705;HRun=0;HaplotypeScore=250.3731;InbreedingCoeff=-0.3461;MQ=50.81;MQ0=71;MQRankSum=-0.520;QD=3.66;ReadPosRankSum=6.855;VQSLOD=0.8223;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:22,14:37:99:127,0,111	0/0:14,0:14:14.90:0,15,114	0/0:96,0:15:13.79:0,14,263	0/0:128,0:23:14.85:0,15,170	0/0:22,0:21:12.71:0,13,92	0/1:21,0:21:40.72:120,0,41	0/1:16,12:27:43.53:44,0,69	0/0:36,0:35:24.96:0,25,437	0/0:14,7:20:16.11:0,16,159	0/0:19,0:21:54.20:0,54,571	0/0:12,0:13:5.77:0,6,65	0/1:19,8:31:21.84:22,0,131	0/1:22,5:27:99:180,0,113	0/1:19,13:31:36.82:37,0,84	0/1:32,0:30:13.02:13,0,166	0/1:30,0:30:47.65:48,0,143	0/0:25,0:26:27.20:0,27,510	0/1:10,1:11:99:100,0,100	0/0:16,0:18:11.22:0,11,316	0/0:33,0:39:15.39:0,15,258	0/0:18,0:19:1.13:0,1,82	0/1:21,3:23:53.67:54,0,98	0/1:7,10:19:21.23:42,0,21	0/0:27,8:35:11.97:0,12,85	0/0:15,8:21:18.04:0,18,122	0/1:24,10:36:68.48:350,0,68	0/1:14,10:25:91.47:288,0,91	0/1:14,0:12:8.93:91,0,9
chr10	21285803	.	C	CCAAGGCCTCGGTT	71427.83	PASS	AB=0.847;AC=32;AF=0.571;AN=56;BaseQRankSum=1.081;DP=881;FS=3.634;HRun=0;HaplotypeScore=330.5138;InbreedingCoeff=0.8668;MQ=83.78;MQ0=0;MQRankSum=-23.845;QD=141.72;ReadPosRankSum=-1.066;VQSLOD=4.3193;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:25,15:43:99:5162,102,0	0/1:11,0:10:6.88:7,0,981	0/0:40,0:40:99:0,102,3307	0/0:31,0:32:80.06:0,80,2372	0/0:34,0:34:99:0,102,3896	1/1:10,11:21:57.20:3383,57,0	1/1:13,8:26:60.16:3308,60,0	1/1:34,6:41:99:6022,114,0	1/1:10,16:30:84.29:5153,84,0	0/0:30,0:30:84.29:0,84,3230	0/0:16,0:16:48.16:0,48,1849	1/1:17,18:40:99:5878,105,0	1/1:15,17:36:87.24:5007,87,0	1/1:17,26:47:99:7502,123,0	0/0:32,0:32:96.29:0,96,3555	0/0:40,0:40:99:0,120,4646	0/0:40,0:39:99:0,108,3974	1/1:7,6:14:39.13:2396,39,0	0/0:31,0:31:87.30:0,87,3171	0/0:35,0:35:99:0,105,4022	0/0:47,0:47:99:0,138,5001	1/1:12,11:25:60.21:3670,60,0	1/1:11,15:26:72.25:4322,72,0	1/1:17,8:34:59.13:2785,59,0	1/1:14,12:30:75.12:3893,75,0	0/1:23,16:41:99:6318,0,240	1/1:8,17:26:72.21:4374,72,0	1/1:8,4:13:36.12:2250,36,0
chr10	21286366	.	GA	G	2808.37	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=5.040;DP=776;FS=8.955;HRun=7;HaplotypeScore=159.8339;InbreedingCoeff=0.9976;MQ=76.78;MQ0=0;MQRankSum=0.662;QD=25.53;ReadPosRankSum=0.236;VQSLOD=1.7222;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,99,1245	1/1:0,18:18:54.12:551,54,0	0/0:26,0:26:62.83:0,63,785	0/0:18,0:18:20.73:0,21,518	1/1:5,37:42:99:1102,108,0	0/0:32,0:31:87.28:0,87,1094	0/0:12,0:12:36.11:0,36,441	0/0:35,0:35:87.26:0,87,1081	0/0:27,0:27:72.23:0,72,905	0/0:32,0:32:84.27:0,84,1057	0/0:29,0:29:78.24:0,78,969	0/0:33,0:33:90.29:0,90,1132	0/0:32,0:32:81.25:0,81,1005	0/0:23,0:23:69.19:0,69,838	1/1:1,23:24:63.14:643,63,0	1/1:2,24:26:66.15:673,66,0	0/0:19,0:19:51.16:0,51,642	0/0:10,0:10:21.07:0,21,264	0/0:23,0:23:54.17:0,54,679	0/0:40,0:40:99:0,114,1434	0/0:35,0:35:99:0,99,1233	0/0:29,0:29:78.22:0,78,954	0/0:30,0:30:87.28:0,87,1095	0/0:29,0:29:78.25:0,78,980	0/0:36,0:36:99:0,99,1222	0/0:37,0:37:99:0,99,1224	0/0:29,0:29:81.24:0,81,995	0/0:16,0:16:48.15:0,48,603
chr10	21286521	.	A	ATCTG	5096.04	PASS	AB=0.695;AC=29;AF=0.518;AN=56;BaseQRankSum=4.184;DP=769;FS=7.155;HRun=0;HaplotypeScore=163.7410;InbreedingCoeff=0.7172;MQ=59.52;MQ0=4;MQRankSum=-2.672;QD=10.89;ReadPosRankSum=-1.602;VQSLOD=3.4408;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:28:23.06:250,23,0	0/0:12,0:12:17.99:0,18,173	0/0:25,0:17:42.05:0,42,590	0/0:26,0:18:44.81:0,45,693	0/0:33,0:32:53.77:0,54,539	1/1:7,24:33:18.06:443,18,0	1/1:21,0:21:21.73:302,22,0	1/1:47,0:47:92.01:731,92,0	1/1:3,22:26:6.02:148,6,0	0/0:39,0:39:99:0,105,1908	0/0:21,0:21:51.16:0,51,898	1/1:0,31:33:14.84:370,15,0	1/1:3,29:33:18.56:511,19,0	0/1:5,18:24:0.85:424,0,1	0/0:26,0:26:44.96:0,45,419	0/0:31,0:30:57:0,57,628	0/0:19,0:19:42.11:0,42,721	0/1:20,0:20:38.05:208,0,38	0/0:16,0:16:42.05:0,42,687	0/0:41,0:41:93.32:0,93,1714	0/0:12,0:12:30.10:0,30,568	0/1:4,36:40:30.50:136,0,31	1/1:3,23:25:0.47:1,0,0	1/1:2,24:26:8.24:221,8,0	1/1:5,14:21:9.02:219,9,0	1/1:42,0:42:48.82:973,49,0	1/1:32,0:32:2.80:61,3,0	1/1:12,1:13:6.01:99,6,0
chr10	21286537	.	G	GTCTGTCTA	5355	PASS	AB=1.000;AC=28;AF=0.500;AN=56;BaseQRankSum=2.172;DP=762;FS=0.000;HRun=0;HaplotypeScore=213.9262;InbreedingCoeff=0.2078;MQ=58.03;MQ0=5;MQRankSum=-1.662;QD=9.68;ReadPosRankSum=3.194;VQSLOD=3.2941;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:27:10.11:249,0,10	1/1:6,0:13:14.97:121,15,0	0/0:11,0:4:3:0,3,25	0/0:20,0:12:23.14:0,23,244	1/1:18,0:34:35.72:283,36,0	0/1:33,0:32:99:160,0,129	0/1:22,0:22:25.79:251,0,26	1/1:49,0:48:99:785,104,0	0/1:23,0:23:42.56:43,0,59	0/0:22,0:39:99:0,104,1245	0/0:9,0:22:35.91:0,36,462	0/1:31,0:31:66.79:117,0,67	1/1:31,0:31:20.82:202,21,0	0/1:24,0:24:72.02:150,0,72	1/1:13,0:31:35.82:298,36,0	0/1:14,0:31:30.34:254,0,30	0/0:10,0:19:35.92:0,36,493	0/1:22,0:22:99:179,0,102	0/0:10,0:15:29.68:0,30,312	0/0:21,0:42:80.59:0,81,1030	0/0:15,0:15:38.94:0,39,324	0/1:38,0:37:27.55:28,0,186	0/0:26,0:25:5.99:0,6,50	1/1:23,0:23:12.01:112,12,0	0/1:24,0:24:57.07:57,0,125	1/1:2,40:46:99:1832,105,0	1/1:0,32:36:2.80:131,3,0	1/1:2,7:12:6.02:105,6,0
chr10	21287947	.	A	AT	1539.08	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=1.837;DP=476;FS=2.640;HRun=8;HaplotypeScore=49.4370;InbreedingCoeff=0.8991;MQ=71.08;MQ0=1;MQRankSum=-0.306;QD=21.38;ReadPosRankSum=0.348;VQSLOD=3.7552;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:98.99:0,99,895	1/1:1,5:6:15.04:173,15,0	0/0:23,0:11:11.81:0,12,98	0/1:10,0:8:0.20:0,0,36	1/1:4,22:26:57.17:658,57,0	0/0:21,0:21:57.03:0,57,522	0/0:12,0:12:27:0,27,247	0/0:27,0:27:60.01:0,60,549	0/0:10,0:10:24.01:0,24,220	0/0:24,0:24:66.02:0,66,599	0/0:19,0:19:45.02:0,45,412	0/0:16,0:16:39.01:0,39,356	0/0:12,0:12:30:0,30,269	0/0:18,0:18:51.02:0,51,467	1/1:1,12:13:30.09:346,30,0	1/1:1,16:17:45.13:519,45,0	0/0:28,0:28:75.04:0,75,686	0/0:19,0:19:54.03:0,54,494	0/0:16,0:16:33.01:0,33,302	0/0:13,0:13:36.01:0,36,327	0/0:5,0:5:12.01:0,12,110	0/0:10,0:10:30.02:0,30,275	0/0:17,0:17:41.99:0,42,375	0/0:8,0:8:21:0,21,192	0/0:23,0:23:63.01:0,63,572	0/0:20,0:20:57.02:0,57,518	0/0:20,0:20:54.02:0,54,494	0/0:4,0:4:12.01:0,12,110
chr10	21288193	.	CT	C	3993.35	PASS	AB=0.634;AC=27;AF=0.563;AN=48;BaseQRankSum=-7.593;DP=491;FS=16.573;HRun=13;HaplotypeScore=68.1656;InbreedingCoeff=0.5195;MQ=61.36;MQ0=14;MQRankSum=2.295;QD=11.54;ReadPosRankSum=2.417;VQSLOD=1.7046;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,22:26:41.71:305,42,0	./.	0/0:13,0:7:3:0,3,29	0/0:19,0:12:11.23:0,11,71	./.	0/1:8,12:20:28.58:180,0,29	1/1:8,19:26:42.96:346,43,0	1/1:15,22:37:35.99:413,36,0	0/1:4,8:12:8.29:110,0,8	0/0:6,0:13:35.09:0,35,191	0/0:9,0:14:13.58:0,14,112	1/1:8,17:26:45.78:314,46,0	1/1:4,17:22:34.56:239,35,0	1/1:4,17:22:40.20:276,40,0	./.	./.	0/0:9,0:21:21.80:0,22,109	1/1:3,15:19:8.65:217,9,0	0/0:27,0:29:16.73:0,17,171	0/0:8,0:20:17.76:0,18,98	0/0:4,0:7:7.58:0,8,42	0/1:5,4:9:28.80:29,0,73	1/1:4,9:13:29.74:212,30,0	1/1:9,22:30:58.70:421,59,0	1/1:4,14:18:8.62:217,9,0	1/1:4,21:25:45.06:400,45,0	0/1:7,17:24:9.69:259,0,10	0/1:3,3:6:17.24:54,0,17
chr10	21288543	.	TC	T	1934.82	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=6.987;DP=516;FS=40.552;HRun=1;HaplotypeScore=101.6195;InbreedingCoeff=0.9496;MQ=80.56;MQ0=2;MQRankSum=-8.088;QD=26.87;ReadPosRankSum=3.050;VQSLOD=1.2885;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:35:78.08:0,78,794	1/1:0,4:4:6.02:78,6,0	0/0:26,0:22:61.69:0,62,828	0/0:23,0:22:46.85:0,47,560	1/1:6,8:14:37.67:464,38,0	0/0:16,0:16:42.04:0,42,473	0/0:15,0:18:47.02:0,47,463	0/0:15,0:15:41.99:0,42,498	0/0:18,0:21:54.83:0,55,480	0/0:8,0:8:20.83:0,21,293	0/0:9,0:10:24.04:0,24,311	0/0:26,0:27:55.17:0,55,731	0/0:19,0:20:51.98:0,52,533	0/0:21,0:24:61.19:0,61,593	1/1:0,18:28:54.17:666,54,0	1/1:4,22:26:37.99:880,38,0	0/0:21,0:22:53.97:0,54,813	0/0:22,0:22:54.07:0,54,656	0/0:15,0:16:44.32:0,44,622	0/0:11,0:11:30.06:0,30,405	0/0:13,0:13:29.95:0,30,378	0/0:14,0:15:37.12:0,37,545	0/0:11,0:12:26.77:0,27,287	0/0:27,0:27:65.79:0,66,728	0/0:26,0:26:68.48:0,68,800	0/0:7,0:7:18.05:0,18,252	0/0:25,0:26:50.37:0,50,529	0/0:3,0:3:9.03:0,9,115
chr10	21288545	.	TCCCC	T	8838.38	PASS	AB=0.800;AC=41;AF=0.732;AN=56;BaseQRankSum=-0.562;DP=496;FS=48.779;HRun=14;HaplotypeScore=102.0042;InbreedingCoeff=0.7751;MQ=79.65;MQ0=2;MQRankSum=-5.364;QD=23.38;ReadPosRankSum=6.720;VQSLOD=-0.3437;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,23:32:57.04:787,57,0	1/1:3,2:5:9.01:102,9,0	0/0:29,0:23:33.44:0,33,477	0/0:21,0:19:32.79:0,33,437	1/1:5,5:11:23.99:260,24,0	1/1:5,9:15:26.99:357,27,0	1/1:7,11:18:36.04:509,36,0	1/1:8,7:15:17.87:254,18,0	1/1:8,12:20:43.29:577,43,0	0/1:6,0:8:1.20:1,0,20	0/0:10,0:10:2.66:0,3,25	1/1:7,20:27:51.05:715,51,0	1/1:7,11:18:36.02:509,36,0	1/1:8,13:22:45.04:605,45,0	1/1:11,17:28:51.15:642,51,0	1/1:3,20:24:63.13:800,63,0	0/0:19,0:23:36.46:0,36,480	1/1:9,13:22:29.97:424,30,0	0/0:12,0:16:6.94:0,7,67	0/0:7,0:8:2.59:0,3,17	0/0:10,0:10:5.92:0,6,41	1/1:12,0:15:0.17:1,0,0	1/1:5,7:12:17.99:254,18,0	1/1:4,22:26:51.10:722,51,0	1/1:9,15:24:36.02:508,36,0	1/1:4,2:6:5.94:85,6,0	1/1:8,16:26:49.29:640,49,0	1/1:1,2:3:5.99:85,6,0
chr10	21288769	.	T	TTA	1618.58	PASS	AB=1.000;AC=12;AF=0.214;AN=56;BaseQRankSum=8.166;DP=643;FS=7.805;HRun=0;HaplotypeScore=139.7824;InbreedingCoeff=0.6339;MQ=63.10;MQ0=6;MQRankSum=-3.891;QD=9.63;ReadPosRankSum=0.651;VQSLOD=3.0191;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:74.45:0,74,607	1/1:5,6:11:27.05:346,27,0	0/0:28,0:16:31.37:0,31,378	0/0:24,0:14:35.98:0,36,351	1/1:14,6:19:33.65:351,34,0	0/0:30,0:31:86.36:0,86,703	0/0:28,0:28:67.77:0,68,543	0/0:31,0:31:92.88:0,93,790	0/0:18,0:18:50.97:0,51,433	0/0:22,0:22:13.57:0,14,302	0/1:20,0:20:6.99:7,0,162	0/0:16,0:16:47.87:0,48,393	0/0:26,0:25:62.94:0,63,528	0/0:25,0:24:62.51:0,63,506	1/1:14,10:24:45.70:527,46,0	1/1:21,9:31:17.82:540,18,0	0/1:23,0:22:4.94:5,0,194	0/0:15,0:15:38.76:0,39,307	0/0:11,0:11:6.91:0,7,194	0/1:14,0:14:4.69:5,0,35	0/1:25,0:25:4.19:4,0,158	0/0:21,0:21:53.98:0,54,477	0/0:28,0:27:62.76:0,63,541	0/0:28,0:28:71.95:0,72,609	0/0:24,0:23:52.98:0,53,501	0/0:27,0:27:80.77:0,81,675	0/0:26,0:26:59.77:0,60,497	0/0:12,0:12:32.96:0,33,276
chr10	21288770	.	TAC	T	6343.51	PASS	AB=0.629;AC=29;AF=0.537;AN=54;BaseQRankSum=-8.359;DP=668;FS=2.741;HRun=0;HaplotypeScore=125.5677;InbreedingCoeff=0.7856;MQ=62.41;MQ0=9;MQRankSum=4.266;QD=16.43;ReadPosRankSum=3.203;VQSLOD=5.1316;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:16,18:35:38.56:419,39,0	0/0:13,0:13:26.97:0,27,232	./.	0/0:27,0:14:6.01:0,6,63	0/0:21,0:20:20.59:0,21,164	1/1:14,13:30:53.60:544,54,0	0/1:13,14:28:3.02:362,0,3	1/1:24,6:31:20.89:215,21,0	1/1:3,14:18:41.95:453,42,0	0/0:16,0:25:35.92:0,36,325	0/0:11,0:22:16.30:0,16,179	1/1:6,9:16:29.92:318,30,0	1/1:7,16:25:6.58:436,7,0	1/1:10,14:24:38.94:417,39,0	0/0:24,0:24:35.95:0,36,307	0/0:33,1:34:16.84:0,17,342	0/0:11,0:23:33:0,33,307	1/1:8,7:15:12.73:195,13,0	0/0:11,0:15:20.98:0,21,210	0/0:3,0:14:14.72:0,15,169	0/0:14,0:32:36:0,36,329	0/1:6,15:21:3.67:397,0,4	0/1:13,14:27:13.14:285,0,13	1/1:7,20:28:53.99:588,54,0	1/1:6,15:22:41.31:481,41,0	1/1:15,12:27:36.09:396,36,0	1/1:4,18:23:56.99:621,57,0	1/1:4,7:12:20.89:217,21,0
chr10	21288802	.	C	CTT	1960.43	PASS	AB=0.577;AC=7;AF=0.125;AN=56;BaseQRankSum=10.109;DP=769;FS=3.812;HRun=0;HaplotypeScore=159.6426;InbreedingCoeff=0.6869;MQ=58.09;MQ0=19;MQRankSum=-8.271;QD=17.50;ReadPosRankSum=0.101;VQSLOD=3.7690;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:85.29:0,85,1016	0/1:4,7:15:12.06:315,0,12	0/0:51,0:8:20.86:0,21,265	0/0:44,0:6:0.03:0,0,88	1/1:7,13:24:11.60:395,12,0	0/0:26,0:26:77.89:0,78,795	0/0:32,0:31:74.63:0,75,853	0/0:23,0:23:64.26:0,64,781	0/0:20,0:20:56.95:0,57,565	0/0:33,0:33:69.19:0,69,967	0/0:21,0:21:39.71:0,40,454	0/0:18,0:18:54.01:0,54,605	0/0:33,0:32:80.99:0,81,871	0/0:27,0:26:72.03:0,72,812	1/1:6,15:32:2.49:577,2,0	1/1:6,24:40:12.14:803,12,0	0/0:25,0:24:45.10:0,45,499	0/0:15,0:15:42.01:0,42,472	0/0:19,0:18:47.64:0,48,591	0/0:20,0:20:44.71:0,45,531	0/0:40,0:40:73.19:0,73,902	0/0:28,0:29:72.01:0,72,816	0/0:22,0:21:47.95:0,48,494	0/0:31,0:31:83.98:0,84,893	0/0:21,0:20:59.91:0,60,574	0/0:29,0:28:79.02:0,79,966	0/0:28,0:27:83.96:0,84,849	0/0:8,0:8:20.95:0,21,169
chr10	21291351	.	A	AG	21544.10	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-16.201;DP=787;FS=1.334;HRun=3;HaplotypeScore=68.4094;InbreedingCoeff=0.9998;MQ=85.47;MQ0=0;MQRankSum=-2.950;QD=37.40;ReadPosRankSum=4.397;VQSLOD=5.2166;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,46:47:99:1722,123,0	1/1:0,20:20:57.18:798,57,0	0/0:24,0:24:58.95:0,59,643	0/0:24,0:24:69.20:0,69,810	1/1:0,32:32:93.31:1301,93,0	1/1:1,31:32:93.31:1302,93,0	1/1:3,30:33:87.29:1218,87,0	1/1:4,32:36:96.31:1327,96,0	1/1:3,29:32:78.26:1092,78,0	0/0:39,0:39:99:0,111,1323	0/0:16,0:16:42.13:0,42,504	1/1:1,21:22:54.18:756,54,0	1/1:1,34:35:96.32:1344,96,0	1/1:1,36:37:99:1383,99,0	1/1:3,36:39:99:1386,99,0	1/1:0,21:21:57.19:798,57,0	0/0:24,0:24:66.19:0,66,779	1/1:1,20:21:57.19:798,57,0	0/0:27,0:27:72.22:0,72,863	0/0:22,0:22:63.19:0,63,756	0/0:35,0:35:93.24:0,93,1088	1/1:1,28:29:78.26:1092,78,0	1/1:2,18:20:51.17:713,51,0	1/1:1,27:28:81.27:1134,81,0	1/1:2,22:24:63.21:882,63,0	1/1:3,23:26:69.20:946,69,0	1/1:4,29:33:84.15:1171,84,0	1/1:0,9:9:27.09:378,27,0
chr10	21291976	.	T	TA	1744.22	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=9.283;DP=574;FS=0.464;HRun=8;HaplotypeScore=83.5870;InbreedingCoeff=0.9904;MQ=76.72;MQ0=4;MQRankSum=-10.345;QD=21.01;ReadPosRankSum=-1.210;VQSLOD=3.1634;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:18.57:0,19,403	1/1:5,4:9:24:222,24,0	0/0:31,0:23:38.79:0,39,339	0/0:26,0:20:35.94:0,36,322	1/1:24,6:30:80.92:734,81,0	0/0:19,0:19:51.03:0,51,467	0/0:20,0:20:29.86:0,30,369	0/0:26,0:26:69:0,69,616	0/0:16,0:16:45:0,45,403	0/0:20,0:20:50.99:0,51,457	0/0:29,0:29:69.03:0,69,631	0/0:19,0:19:53.25:0,53,474	0/0:19,0:19:50.95:0,51,457	0/0:16,0:16:42.02:0,42,384	1/1:19,7:26:65.93:577,66,0	1/1:14,4:18:39.07:371,39,0	0/0:18,0:18:48.03:0,48,439	0/0:27,0:27:70.57:0,71,630	0/0:23,0:22:45:0,45,408	0/0:21,0:21:54.03:0,54,494	0/0:7,0:7:17.99:0,18,160	0/0:19,0:19:48.02:0,48,439	0/0:16,0:16:36:0,36,327	0/0:14,0:14:36:0,36,324	0/0:26,0:26:66.02:0,66,604	0/0:22,0:22:54.02:0,54,494	0/0:31,0:31:84:0,84,758	0/0:5,0:5:15.01:0,15,137
chr10	21291980	.	AAAAAC	A	3079.63	PASS	AB=0.643;AC=7;AF=0.125;AN=56;BaseQRankSum=9.899;DP=561;FS=0.000;HRun=0;HaplotypeScore=117.9806;InbreedingCoeff=0.8740;MQ=74.95;MQ0=5;MQRankSum=-9.482;QD=38.50;ReadPosRankSum=-0.184;VQSLOD=3.5559;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:57.17:0,57,1415	0/1:4,5:9:2.63:303,0,3	0/0:31,0:23:39.39:0,39,732	0/0:25,0:17:39.01:0,39,656	1/1:8,20:28:64.32:1308,64,0	0/0:18,0:18:54.18:0,54,1437	0/0:17,0:17:45.13:0,45,1093	0/0:28,0:28:78.20:0,78,1757	0/0:17,0:17:48.13:0,48,1120	0/0:19,0:19:57.16:0,57,1416	0/0:27,0:27:75.21:0,75,1873	0/0:20,0:20:60.20:0,60,1579	0/0:18,0:18:54.17:0,54,1365	0/0:16,0:16:45.13:0,45,1036	1/1:9,17:26:9.84:981,10,0	1/1:7,10:17:17.32:631,17,0	0/0:18,0:18:54.18:0,54,1357	0/0:26,0:26:75.23:0,75,1924	0/0:20,0:19:45.13:0,45,1120	0/0:20,0:20:57.16:0,57,1377	0/0:8,0:7:21.04:0,21,478	0/0:16,0:16:48.16:0,48,1312	0/0:20,0:20:51.15:0,51,1188	0/0:13,0:13:36.11:0,36,983	0/0:25,0:25:69.22:0,69,1923	0/0:21,0:20:57.17:0,57,1437	0/0:32,0:32:93.32:0,93,2576	0/0:5,0:5:15.05:0,15,421
chr10	21292001	.	AAAC	A	2867.98	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=12.380;DP=562;FS=4.576;HRun=0;HaplotypeScore=97.9882;InbreedingCoeff=0.9669;MQ=65.20;MQ0=5;MQRankSum=-9.701;QD=39.29;ReadPosRankSum=3.008;VQSLOD=4.6814;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:59.94:0,60,1297	1/1:3,5:8:18.06:303,18,0	0/0:22,0:14:32.50:0,33,567	0/0:19,0:13:29.29:0,29,610	1/1:1,24:25:69.19:1120,69,0	0/0:21,0:21:63.22:0,63,1425	0/0:19,0:19:54.17:0,54,1186	0/0:25,0:25:69.23:0,69,1432	0/0:21,0:21:63.19:0,63,1309	0/0:20,0:20:57.16:0,57,1274	0/0:24,0:24:72.18:0,72,1591	0/0:25,0:25:71.82:0,72,1497	0/0:19,0:19:57.20:0,57,1292	0/0:12,0:12:36.11:0,36,789	1/1:6,17:23:39.72:935,40,0	1/1:2,15:17:7.20:664,7,0	0/0:24,0:24:69.02:0,69,1372	0/0:24,0:24:72.25:0,72,1625	0/0:21,0:20:60.19:0,60,1310	0/0:20,0:20:60.19:0,60,1306	0/0:7,0:6:18.04:0,18,373	0/0:16,0:16:48.15:0,48,1019	0/0:22,0:22:57.15:0,57,1241	0/0:16,0:16:45.15:0,45,981	0/0:24,0:24:72.16:0,72,1567	0/0:25,0:24:63.21:0,63,1342	0/0:36,0:36:99:0,105,2339	0/0:6,0:6:15.02:0,15,301
chr10	21293110	.	ATGTGTGTG	A	14857.78	PASS	AB=0.655;AC=36;AF=0.667;AN=54;BaseQRankSum=-6.370;DP=942;FS=1.652;HRun=0;HaplotypeScore=288.1942;InbreedingCoeff=0.8265;MQ=59.14;MQ0=17;MQRankSum=-10.909;QD=24.60;ReadPosRankSum=-1.864;VQSLOD=3.8542;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,30:41:41.87:705,42,0	./.	0/0:52,0:26:23.84:0,24,431	0/0:53,0:31:21.07:0,21,486	1/1:7,0:29:17.57:212,18,0	1/1:9,16:25:30.06:627,30,0	1/1:10,28:38:50.75:890,51,0	1/1:21,23:44:52.42:997,52,0	1/1:11,25:36:45.62:1240,46,0	0/0:8,0:25:65.97:0,66,658	0/0:10,0:18:17.56:0,18,178	1/1:12,25:37:42.13:928,42,0	1/1:13,25:38:51.07:1206,51,0	1/1:10,32:42:68.89:1508,69,0	1/1:12,0:35:35.99:464,36,0	1/1:8,0:16:29:380,29,0	0/0:14,0:30:59.66:0,60,547	0/1:9,7:16:51.59:268,0,52	0/0:13,0:21:35.22:0,35,329	0/0:10,0:36:56.20:0,56,644	0/0:40,0:96:99:0,136,1305	1/1:7,28:35:59.57:911,60,0	1/1:9,12:22:23.90:403,24,0	0/1:16,27:43:10.54:160,0,11	1/1:13,20:35:43.33:860,43,0	1/1:9,30:40:90.17:1867,90,0	1/1:10,13:23:42.06:999,42,0	1/1:4,3:7:9.03:232,9,0
chr10	21293118	.	G	GGT	415.31	PASS	AB=0.966;AC=7;AF=0.125;AN=56;BaseQRankSum=1.983;DP=909;FS=35.927;HRun=0;HaplotypeScore=273.6043;InbreedingCoeff=0.1004;MQ=52.07;MQ0=21;MQRankSum=-2.672;QD=3.10;ReadPosRankSum=-5.491;VQSLOD=0.8389;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:40.20:0,40,369	1/1:1,0:1:3.01:38,3,0	0/0:49,0:19:48.68:0,49,660	0/0:55,0:24:66.19:0,66,956	0/1:27,1:28:68.65:69,0,309	0/0:23,0:23:40.33:0,40,392	0/0:36,0:36:23.05:0,23,453	0/1:38,0:38:7.63:8,0,1099	0/0:32,0:32:43.81:0,44,487	0/0:29,0:27:80.71:0,81,779	0/0:17,0:17:29.96:0,30,342	0/0:35,0:34:31.20:0,31,380	0/0:34,0:34:72.45:0,72,651	0/0:44,0:43:59.69:0,60,457	0/1:31,1:31:99:177,0,225	0/1:15,2:17:99:233,0,215	0/0:30,0:30:82.88:0,83,736	0/1:18,0:18:14.63:15,0,246	0/0:21,0:17:49.74:0,50,537	0/0:33,0:33:80.41:0,80,724	0/0:97,0:96:99:0,189,1939	0/0:33,0:33:68.70:0,69,581	0/0:20,0:20:44.59:0,45,450	0/0:44,0:44:23.30:0,23,268	0/0:33,1:34:44.19:0,44,539	0/0:40,0:40:69.28:0,69,814	0/0:22,0:22:53.77:0,54,449	0/0:7,0:7:20.81:0,21,154
chr10	21293792	.	CT	C	8307.85	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=-0.380;DP=657;FS=3.093;HRun=10;HaplotypeScore=90.1483;InbreedingCoeff=0.9740;MQ=73.93;MQ0=0;MQRankSum=-1.751;QD=21.64;ReadPosRankSum=1.210;VQSLOD=5.5058;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,46:49:99:1178,137,0	0/0:13,0:13:19.85:0,20,118	0/0:15,0:15:23.25:0,23,205	0/0:12,1:13:4.55:0,5,207	0/0:25,0:25:45.26:0,45,325	1/1:2,16:18:38.98:339,39,0	1/1:3,19:22:47.98:417,48,0	1/1:6,21:27:65.01:549,65,0	1/1:2,20:22:59.99:521,60,0	0/0:25,0:25:66.17:0,66,725	0/0:20,0:20:57.15:0,57,630	1/1:2,27:29:68.99:599,69,0	1/1:2,26:28:74.91:644,75,0	1/1:5,24:29:35.79:540,36,0	0/0:35,0:35:97.97:0,98,491	0/0:31,0:31:54.87:0,55,353	0/0:20,0:21:53.22:0,53,622	1/1:4,18:22:50.99:443,51,0	0/0:13,1:14:13.02:0,13,354	0/0:32,0:32:87.24:0,87,962	0/0:28,0:29:62.99:0,63,670	1/1:1,20:22:56.02:475,56,0	1/1:0,19:19:50.99:443,51,0	1/1:1,33:34:92.98:807,93,0	1/1:0,12:12:26.99:234,27,0	1/1:2,17:19:50.99:443,51,0	1/1:3,24:27:62.72:547,63,0	1/1:0,5:5:15:130,15,0
chr10	21293996	.	GA	G	2202.25	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=13.871;DP=710;FS=3.393;HRun=10;HaplotypeScore=87.3458;InbreedingCoeff=0.9617;MQ=72.78;MQ0=2;MQRankSum=0.228;QD=19.49;ReadPosRankSum=-0.388;VQSLOD=4.1071;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:40:99:0,111,1164	1/1:2,10:13:29.02:240,29,0	0/0:26,1:21:17.65:0,18,319	0/0:17,0:16:28.29:0,28,274	1/1:5,24:29:62.80:534,63,0	0/0:25,0:25:54.93:0,55,659	0/0:17,0:17:48.13:0,48,531	0/0:21,1:22:25.08:0,25,499	0/0:25,0:25:72.17:0,72,785	0/0:25,0:26:69.01:0,69,738	0/0:23,4:27:11.54:0,12,576	0/0:28,1:29:52:0,52,784	0/0:32,0:32:55.23:0,55,815	0/0:25,1:26:46.06:0,46,705	1/1:2,40:42:99:963,111,0	1/1:3,26:29:71.98:625,72,0	0/0:23,0:23:53.21:0,53,542	0/0:27,0:27:78.16:0,78,841	0/0:23,1:24:28.08:0,28,524	0/0:26,0:26:36.76:0,37,592	0/0:11,1:12:6.81:0,7,277	0/0:20,2:22:25.04:0,25,491	0/0:27,0:27:72.18:0,72,787	0/0:24,0:24:66.15:0,66,713	0/0:27,0:27:48.65:0,49,724	0/0:34,1:35:67.17:0,67,947	0/0:27,0:29:55.02:0,55,782	0/0:8,0:8:24.03:0,24,246
chr10	21295648	.	TCAA	T	14941.88	PASS	AB=0.741;AC=46;AF=0.821;AN=56;BaseQRankSum=-0.832;DP=972;FS=2.072;HRun=0;HaplotypeScore=235.9613;InbreedingCoeff=0.2660;MQ=45.53;MQ0=13;MQRankSum=0.850;QD=17.06;ReadPosRankSum=8.756;VQSLOD=4.0574;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:34,7:40:4.40:326,0,4	1/1:10,6:16:24:336,24,0	0/0:58,0:28:74.90:0,75,1138	0/0:38,0:19:41.29:0,41,705	1/1:18,5:23:38.86:458,39,0	0/1:13,8:21:43.69:310,0,44	0/1:19,23:42:73.17:594,0,73	1/1:37,25:60:40.09:746,40,0	1/1:20,15:35:44.50:601,45,0	1/1:25,17:42:84.06:1104,84,0	1/1:10,11:21:36.10:460,36,0	0/1:24,16:40:11.92:627,0,12	1/1:30,27:57:28.44:966,28,0	1/1:17,22:39:50.61:881,51,0	1/1:32,19:51:87.24:1180,87,0	1/1:33,13:46:69.19:922,69,0	1/1:17,10:25:20.28:576,20,0	1/1:18,5:23:4.49:274,4,0	1/1:14,3:14:19.99:244,20,0	1/1:14,10:24:47.77:569,48,0	1/1:11,29:40:15.10:323,15,0	0/1:23,10:33:26.38:589,0,26	1/1:15,11:26:20.84:601,21,0	1/1:35,10:45:37.13:509,37,0	0/1:24,13:37:23.15:462,0,23	1/1:12,9:21:32.68:432,33,0	1/1:20,17:37:50.89:715,51,0	1/1:7,3:9:11.72:137,12,0
chr10	21295651	.	A	ACAACAT	13503.81	PASS	AB=0.954;AC=35;AF=0.625;AN=56;BaseQRankSum=-4.022;DP=986;FS=8.117;HRun=0;HaplotypeScore=299.5747;InbreedingCoeff=0.1418;MQ=44.74;MQ0=13;MQRankSum=-8.303;QD=16.77;ReadPosRankSum=1.137;VQSLOD=2.9784;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:18,23:43:11.95:174,12,0	0/0:17,0:17:28.15:0,28,227	0/0:57,0:28:81.12:0,81,1198	0/0:37,0:19:36.94:0,37,721	0/1:24,0:24:99:100,0,241	1/1:24,1:25:18.20:409,18,0	1/1:40,0:40:51.17:744,51,0	0/1:62,0:59:99:614,0,292	1/1:35,0:35:27.63:831,28,0	0/1:44,0:44:99:376,0,322	0/1:22,0:22:90.53:195,0,91	1/1:38,1:39:60.19:1258,60,0	1/1:57,4:61:73.87:2109,74,0	1/1:33,4:37:75.54:1548,76,0	0/1:52,0:52:99:113,0,386	0/0:43,0:43:7.14:0,7,391	0/0:27,0:25:35.60:0,36,433	0/1:22,1:23:16.34:381,0,16	0/1:18,0:15:61.54:62,0,115	0/1:23,0:23:77.66:78,0,280	0/1:39,0:39:30.31:30,0,146	0/1:32,3:34:13.67:761,0,14	1/1:28,0:28:48.07:584,48,0	0/1:18,26:47:20.66:334,0,21	1/1:37,1:38:46.68:953,47,0	1/1:19,2:21:12.91:575,13,0	1/1:35,2:37:50.96:997,51,0	1/1:9,2:10:15:277,15,0
chr10	21295684	.	TCAA	T	2496.74	PASS	AB=0.944;AC=20;AF=0.357;AN=56;BaseQRankSum=-0.422;DP=986;FS=33.503;HRun=0;HaplotypeScore=254.1717;InbreedingCoeff=-0.5955;MQ=44.22;MQ0=12;MQRankSum=-2.493;QD=3.80;ReadPosRankSum=-2.452;VQSLOD=1.3847;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:29,4:33:99:274,0,210	0/1:18,0:18:17.90:18,0,166	0/0:59,0:47:99:0,108,1797	0/0:46,0:27:61.99:0,62,856	0/1:33,0:33:13.37:13,0,316	0/1:26,0:25:3.82:4,0,291	0/1:34,2:35:99:221,0,722	0/1:46,0:44:99:122,0,1469	0/0:39,0:39:9.38:0,9,357	0/1:46,0:46:99:165,0,664	0/0:23,0:23:0.63:0,1,354	0/1:37,0:37:22.45:22,0,452	0/1:51,0:51:36.01:36,0,427	0/0:37,0:37:1.98:0,2,387	0/0:55,0:55:24.30:0,24,600	0/0:42,0:42:16.35:0,16,491	0/0:27,0:26:3.95:0,4,207	0/1:20,4:24:99:325,0,188	0/1:12,9:17:99:205,0,185	0/1:30,0:29:28.21:28,0,218	0/1:33,0:32:99:222,0,300	0/1:40,0:39:68.43:68,0,374	0/1:16,16:32:99:275,0,260	0/1:38,3:41:99:316,0,483	0/1:33,0:32:54.57:55,0,437	0/1:11,0:24:99:177,0,253	0/1:38,0:37:22.03:22,0,485	0/1:13,2:15:80.45:80,0,257
chr10	21295687	.	A	ACAACAACAT	19867.01	PASS	AB=1.000;AC=51;AF=0.911;AN=56;BaseQRankSum=-4.529;DP=1038;FS=0.592;HRun=0;HaplotypeScore=282.7083;InbreedingCoeff=0.6061;MQ=46.60;MQ0=12;MQRankSum=-1.664;QD=21.29;ReadPosRankSum=4.176;VQSLOD=3.2272;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:30,1:31:33.11:875,33,0	1/1:5,14:19:6.02:197,6,0	0/0:58,0:45:56.96:0,57,911	0/0:47,0:28:35.64:0,36,485	1/1:11,26:42:8.64:305,9,0	1/1:10,19:29:27.09:995,27,0	1/1:38,0:37:48.09:884,48,0	0/1:44,0:42:1.91:556,0,2	1/1:11,24:37:30.10:982,30,0	1/1:20,28:52:66.67:1617,67,0	1/1:10,11:25:18.02:394,18,0	1/1:15,21:38:33.08:881,33,0	1/1:22,24:50:45.11:1465,45,0	1/1:19,17:39:30.36:1118,30,0	1/1:18,38:61:21.07:856,21,0	1/1:14,29:44:9.03:410,9,0	1/1:10,16:28:3.01:136,3,0	1/1:25,0:26:0.06:829,0,0	1/1:21,0:17:21.07:504,21,0	1/1:13,22:36:30.09:549,30,0	1/1:33,1:33:30.05:590,30,0	1/1:17,25:45:7.41:664,7,0	1/1:34,0:34:35.92:1111,36,0	1/1:34,4:39:21.36:1247,21,0	1/1:19,15:34:12.04:403,12,0	1/1:24,1:25:33.99:971,34,0	1/1:16,21:40:33.08:989,33,0	1/1:10,5:16:15.05:341,15,0
chr10	21299634	.	G	GAAA	19527.23	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-7.053;DP=609;FS=2.067;HRun=9;HaplotypeScore=83.2511;InbreedingCoeff=0.9940;MQ=81.80;MQ0=0;MQRankSum=-6.604;QD=35.50;ReadPosRankSum=2.347;VQSLOD=4.5654;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:66.14:0,66,800	1/1:1,10:11:21.07:395,21,0	0/0:12,0:12:21.24:0,21,222	0/0:24,0:23:29.51:0,30,270	1/1:3,16:21:51.10:885,51,0	1/1:4,17:24:48.14:910,48,0	1/1:1,16:19:45.11:796,45,0	1/1:8,20:31:66.13:1117,66,0	1/1:3,17:21:27.07:497,27,0	1/1:0,19:24:61.30:923,61,0	1/1:4,10:16:31.51:379,32,0	1/1:2,11:14:24.08:473,24,0	1/1:3,14:19:24.06:412,24,0	1/1:3,19:24:42.14:772,42,0	1/1:0,21:23:51.15:964,51,0	1/1:3,25:29:56.93:1124,57,0	1/1:5,19:26:45.13:852,45,0	1/1:2,21:25:54.14:1026,54,0	1/1:4,13:18:45.11:793,45,0	1/1:4,18:26:59.96:918,60,0	1/1:2,9:14:32.58:531,33,0	1/1:3,18:22:51.02:826,51,0	1/1:3,12:17:32.94:572,33,0	1/1:1,26:28:54.16:1029,54,0	1/1:5,15:23:24.34:714,24,0	1/1:8,12:21:36.09:610,36,0	1/1:9,24:35:57.09:1070,57,0	1/1:0,18:19:49.41:939,49,0
chr10	21300058	.	AGTGT	A	4407.78	PASS	AB=0.892;AC=17;AF=0.304;AN=56;BaseQRankSum=-5.500;DP=720;FS=0.514;HRun=0;HaplotypeScore=214.5177;InbreedingCoeff=0.4592;MQ=57.46;MQ0=6;MQRankSum=6.031;QD=14.04;ReadPosRankSum=4.351;VQSLOD=4.2787;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:36:2.62:0,3,51	0/1:9,0:9:15.97:16,0,39	0/0:22,0:17:12.01:0,12,158	0/0:25,0:16:12.51:0,13,201	0/1:28,0:28:12.35:12,0,68	0/0:18,0:18:9.03:0,9,127	1/1:41,0:41:0.96:21,1,0	0/0:32,0:30:38.13:0,38,428	0/0:19,0:19:0.66:0,1,2	1/1:7,21:30:69.21:1064,69,0	1/1:5,14:19:36.12:563,36,0	0/0:28,0:28:21.07:0,21,331	0/0:32,0:30:18.92:0,19,267	0/0:22,0:22:12.04:0,12,165	0/0:36,0:36:23.14:0,23,357	0/0:38,0:38:37.91:0,38,540	1/1:8,28:37:41.22:958,41,0	0/0:11,0:11:16.43:0,16,140	1/1:10,11:22:36.05:479,36,0	0/1:3,17:20:7.69:573,0,8	1/1:12,24:36:39.39:644,39,0	0/0:21,0:21:9.03:0,9,135	0/0:24,0:24:2.99:0,3,31	0/1:37,0:37:0.64:1,0,1	0/0:15,0:15:3.01:0,3,32	0/1:32,3:34:74.99:75,0,435	0/0:17,0:17:2.61:0,3,20	0/0:8,0:8:9.02:0,9,149
chr10	21300060	.	T	TGTGTGTGTGTGTGTGC	13729.79	PASS	AB=1.000;AC=32;AF=0.571;AN=56;BaseQRankSum=7.500;DP=731;FS=5.637;HRun=0;HaplotypeScore=354.4310;InbreedingCoeff=0.3169;MQ=55.07;MQ0=7;MQRankSum=-7.682;QD=26.35;ReadPosRankSum=-3.379;VQSLOD=1.7385;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:23,14:37:8.64:629,9,0	1/1:9,0:9:5.23:150,5,0	0/0:23,0:15:27.05:0,27,341	0/0:25,0:16:11.73:0,12,213	1/1:27,0:27:22.72:456,23,0	1/1:22,0:22:15.05:938,15,0	0/1:44,0:44:84.69:655,0,85	0/1:34,0:32:99:749,0,106	1/1:17,0:17:8.91:381,9,0	0/0:30,0:30:78.21:0,78,2423	0/0:18,0:18:33.10:0,33,1107	1/1:30,0:30:1.52:1104,2,0	0/1:32,0:30:18.91:576,0,19	1/1:22,0:22:17.52:1012,18,0	1/1:37,0:37:42.01:1624,42,0	1/1:38,0:38:62.86:2281,63,0	0/0:35,0:35:63.15:0,63,2169	0/1:12,0:12:7.92:1230,0,8	0/0:21,0:21:40.82:0,41,1061	0/0:21,0:21:19.52:0,20,1302	0/1:36,0:36:21.95:22,0,1344	0/1:24,0:24:0.11:207,0,0	1/1:25,0:25:3.07:22,3,0	0/0:37,0:37:3.67:0,4,24	1/1:15,0:15:3.01:179,3,0	0/1:36,0:35:99:893,0,436	0/1:15,0:15:69.39:354,0,69	1/1:8,0:8:9.01:268,9,0
chr10	21300062	.	T	TGTGTGTGTGTGTGTGCGTGC	22449.34	PASS	AB=0.896;AC=38;AF=0.679;AN=56;BaseQRankSum=-3.000;DP=809;FS=10.388;HRun=0;HaplotypeScore=395.4283;InbreedingCoeff=0.3248;MQ=51.39;MQ0=7;MQRankSum=-9.332;QD=33.26;ReadPosRankSum=-1.314;VQSLOD=1.8864;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:38,0:37:8.93:560,9,0	0/1:9,0:9:1.66:128,0,2	0/0:26,0:16:15:0,15,231	0/1:22,0:13:0.29:0,0,178	0/1:28,0:28:12.28:338,0,12	1/1:7,3:30:15.05:1264,15,0	1/1:43,0:43:45.41:1867,45,0	1/1:36,0:34:33.93:1567,34,0	1/1:17,0:17:15.05:917,15,0	0/0:30,0:30:75.09:0,75,2731	0/0:19,0:19:33.10:0,33,1323	1/1:17,6:43:8.01:1583,8,0	0/1:11,7:43:15.04:900,0,15	1/1:12,6:33:17.20:1515,17,0	1/1:38,0:38:4.49:1448,4,0	1/1:38,0:38:42.81:2159,43,0	0/0:36,0:36:60.66:0,61,2586	1/1:12,0:12:26.70:1387,27,0	0/1:19,0:19:15.25:15,0,1084	0/0:23,0:23:42.09:0,42,1606	0/1:38,0:38:36.98:37,0,1501	0/1:11,3:34:15.68:216,0,16	1/1:4,3:30:3.17:49,3,0	1/1:37,0:37:6.23:302,6,0	1/1:3,1:21:2.64:280,3,0	0/1:37,0:36:99:4271,0,130	1/1:16,0:16:18.01:1293,18,0	1/1:5,1:11:9.02:355,9,0
chr10	21300068	.	T	TGTGTGTGCGTGC	11674.63	PASS	AB=1.000;AC=24;AF=0.429;AN=56;BaseQRankSum=6.707;DP=690;FS=0.432;HRun=0;HaplotypeScore=311.5160;InbreedingCoeff=-0.0432;MQ=48.66;MQ0=7;MQRankSum=-7.095;QD=26.41;ReadPosRankSum=4.579;VQSLOD=2.6245;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:24:56.16:383,0,56	1/1:9,1:10:6.01:210,6,0	0/0:26,0:15:30.07:0,30,474	0/0:21,0:11:9.59:0,10,318	1/1:22,2:24:23.02:577,23,0	0/1:17,0:17:30.81:658,0,31	0/1:43,0:43:99:533,0,122	0/1:32,0:30:99:338,0,324	0/1:16,0:16:36.15:329,0,36	0/0:27,0:27:78.10:0,78,1924	0/0:18,0:19:42.11:0,42,957	0/1:36,0:36:99:781,0,168	0/1:29,0:28:99:525,0,126	0/1:26,0:26:39.82:745,0,40	1/1:30,5:35:42.01:1905,42,0	1/1:25,10:35:62.99:2759,63,0	0/0:36,0:36:66.68:0,67,1741	0/1:12,0:12:78.69:441,0,79	0/0:20,0:20:28.07:0,28,773	0/0:25,0:25:51.02:0,51,1234	0/0:38,0:38:54.18:0,54,1164	0/1:22,0:22:43.38:146,0,43	1/1:11,0:11:3.01:47,3,0	0/0:36,0:36:5.93:0,6,46	0/1:10,0:10:43.80:127,0,44	0/1:38,0:37:99:661,0,717	0/1:15,0:15:86.59:321,0,87	0/1:6,0:6:0.04:187,0,0
chr10	21300070	.	T	TGTGTGCGTGC	6608.82	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=5.387;DP=683;FS=2.942;HRun=0;HaplotypeScore=276.5209;InbreedingCoeff=-0.0220;MQ=48.22;MQ0=7;MQRankSum=-4.763;QD=16.20;ReadPosRankSum=4.582;VQSLOD=3.2850;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:23:84.81:104,0,85	1/1:10,0:10:6.01:163,6,0	0/0:25,0:14:30.07:0,30,477	0/0:21,0:11:10.04:0,10,310	1/1:24,0:24:25.01:554,25,0	0/1:17,0:17:30.96:520,0,31	0/1:43,0:43:99:143,0,153	0/0:31,0:29:36.76:0,37,679	0/1:16,0:16:41.10:181,0,41	0/0:26,0:26:78.09:0,78,1660	0/0:18,0:19:42.13:0,42,861	0/1:37,0:37:99:615,0,298	0/1:29,0:28:99:378,0,183	0/1:26,0:26:50.62:476,0,51	1/1:32,3:35:32.97:1196,33,0	1/1:33,1:35:42.46:1671,42,0	0/0:34,0:34:69.69:0,70,1534	0/1:11,0:11:99:191,0,268	0/0:20,0:20:31.04:0,31,701	0/0:25,0:25:50.99:0,51,1075	0/0:38,0:38:57.47:0,57,1041	0/1:22,0:22:84.51:116,0,85	1/1:11,0:11:3.01:47,3,0	0/0:36,0:36:6.46:0,6,67	0/1:9,0:9:43.83:101,0,44	0/1:38,0:37:33.79:34,0,928	0/1:15,0:15:19.50:19,0,134	0/1:6,0:6:66.71:99,0,67
chr10	21300087	.	GCGCGTGCACA	G	274.31	PASS	AB=0.616;AC=3;AF=0.054;AN=56;BaseQRankSum=0.391;DP=594;FS=1.266;HRun=0;HaplotypeScore=271.3279;InbreedingCoeff=-0.0863;MQ=50.82;MQ0=4;MQRankSum=-4.556;QD=3.98;ReadPosRankSum=-2.112;VQSLOD=1.8803;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:12.79:0,13,330	0/0:2,5:7:3:0,3,25	0/0:9,0:4:6:0,6,160	0/0:15,0:7:9.16:0,9,468	0/1:5,8:13:22.68:40,0,23	0/0:22,0:22:16.30:0,16,511	0/0:30,0:30:26.29:0,26,530	0/0:21,0:21:60.12:0,60,1120	0/0:11,0:11:17.68:0,18,282	0/0:30,0:30:77.71:0,78,1903	0/0:20,0:20:45.05:0,45,1184	0/0:34,0:34:50.41:0,50,1443	0/0:31,0:31:41.52:0,42,969	0/0:27,0:27:30.53:0,31,743	0/1:8,18:26:99:102,0,145	0/1:13,17:30:99:231,0,192	0/0:38,0:38:81.28:0,81,2114	0/0:10,0:10:24.08:0,24,605	0/0:19,0:19:48.59:0,49,1282	0/0:25,0:25:57.20:0,57,1692	0/0:35,0:35:60.91:0,61,1499	0/0:22,0:22:8.42:0,8,321	0/0:11,0:11:6.02:0,6,150	0/0:27,0:27:3:0,3,54	0/0:13,0:13:8.52:0,9,213	0/0:18,0:18:51.11:0,51,1205	0/0:15,0:15:12:0,12,516	0/0:8,0:8:15.05:0,15,374
chr10	21300088	.	CGCGT	C	813.48	PASS	AB=0.995;AC=16;AF=0.286;AN=56;BaseQRankSum=-4.000;DP=605;FS=46.499;HRun=0;HaplotypeScore=234.9895;InbreedingCoeff=-0.2462;MQ=51.83;MQ0=4;MQRankSum=-0.639;QD=2.48;ReadPosRankSum=-0.096;VQSLOD=1.4017;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:27:20.83:54,0,21	0/0:7,0:7:3.01:0,3,33	0/0:10,0:5:8.60:0,9,103	0/0:15,0:7:13.56:0,14,178	0/0:13,0:13:4.13:0,4,21	0/1:22,0:22:25.70:26,0,80	0/1:29,1:30:55.43:55,0,63	0/1:22,0:22:99:196,0,132	0/1:11,0:11:6.37:53,0,6	0/0:31,0:31:54.32:0,54,734	0/0:22,0:22:36.96:0,37,371	0/1:35,0:35:99:116,0,228	0/1:33,0:33:89.18:89,0,209	0/1:26,1:27:68.34:68,0,73	0/1:26,0:26:3.04:3,0,196	0/0:30,0:30:6.14:0,6,346	0/0:36,0:36:80.59:0,81,815	0/1:10,0:10:31.81:32,0,71	0/0:19,0:19:16.66:0,17,587	0/0:25,0:25:53.43:0,53,626	0/0:35,0:35:61.56:0,62,727	0/0:20,2:22:8.04:0,8,72	0/0:12,0:12:9:0,9,102	1/1:27,0:27:3:26,3,0	0/1:13,0:13:4.41:41,0,4	0/1:19,0:19:45.80:46,0,186	0/1:18,0:17:74.20:127,0,74	0/1:8,0:8:33.16:33,0,73
chr10	21300226	.	CTTTGTATG	C	3894.44	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=1.162;DP=710;FS=2.512;HRun=0;HaplotypeScore=193.8818;InbreedingCoeff=0.9495;MQ=61.73;MQ0=5;MQRankSum=-0.832;QD=23.89;ReadPosRankSum=3.013;VQSLOD=2.9398;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,36:37:8.94:142,9,0	0/0:12,0:12:36.10:0,36,1000	0/0:19,0:14:35.20:0,35,374	0/0:19,0:10:27.05:0,27,298	0/0:22,0:22:53.97:0,54,729	0/0:33,0:33:92.99:0,93,2134	0/0:37,0:37:95.94:0,96,1699	0/0:31,0:30:90.03:0,90,914	0/0:18,0:18:47.86:0,48,887	1/1:2,29:30:80.99:1363,81,0	1/1:0,7:7:6.02:124,6,0	0/0:34,0:34:87.09:0,87,2138	0/0:38,0:38:90.03:0,90,2151	0/0:26,0:26:59.92:0,60,1169	0/0:35,0:35:74.95:0,75,1698	0/0:33,0:33:78.02:0,78,1610	1/1:0,16:16:6.02:173,6,0	0/0:17,0:17:35.39:0,35,700	1/1:0,21:21:59.86:845,60,0	1/1:0,23:23:33.11:554,33,0	1/1:26,2:28:71.93:693,72,0	0/0:21,0:21:63.07:0,63,1311	0/0:15,0:15:41.12:0,41,1080	0/0:36,0:36:53.61:0,54,1293	0/0:33,0:33:87.05:0,87,1740	0/0:36,0:36:90.08:0,90,1377	0/0:22,0:22:45.04:0,45,803	0/0:10,0:10:30.03:0,30,570
chr10	21300228	.	T	TTGTA	9273.34	PASS	AB=0.693;AC=34;AF=0.680;AN=50;BaseQRankSum=-7.691;DP=743;FS=1.609;HRun=0;HaplotypeScore=140.2917;InbreedingCoeff=0.5281;MQ=60.65;MQ0=6;MQRankSum=2.967;QD=17.05;ReadPosRankSum=-0.722;VQSLOD=4.4012;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:3:0,3,28	1/1:5,9:14:21.07:490,21,0	./.	./.	1/1:11,0:24:14.80:90,15,0	0/1:18,16:35:0.80:900,0,1	0/1:25,11:36:91.77:393,0,92	1/1:38,0:36:9.56:41,10,0	1/1:10,7:17:18.06:405,18,0	0/0:30,0:29:32.25:0,32,284	0/0:7,0:7:3:0,3,28	1/1:15,20:36:45.15:948,45,0	1/1:16,22:39:45.15:1008,45,0	1/1:11,13:24:23.97:471,24,0	1/1:13,23:38:36.12:806,36,0	0/1:18,16:36:15.85:559,0,16	0/0:16,0:16:6:0,6,51	1/1:11,8:20:15.76:274,16,0	0/0:21,0:21:18.02:0,18,168	0/0:23,0:23:8.21:0,8,57	./.	1/1:11,12:23:26.98:506,27,0	1/1:5,10:17:24:559,24,0	1/1:21,16:37:24.05:560,24,0	1/1:19,15:34:33.11:736,33,0	1/1:23,2:39:23.57:319,24,0	0/1:13,1:26:33.91:158,0,34	1/1:10,0:10:5.99:49,6,0
chr10	21300659	.	CT	C	3073.05	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=12.077;DP=697;FS=0.923;HRun=2;HaplotypeScore=73.7413;InbreedingCoeff=0.9982;MQ=86.94;MQ0=0;MQRankSum=-0.666;QD=33.77;ReadPosRankSum=0.678;VQSLOD=3.7588;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:66,0:66:99:0,196,2916	1/1:1,8:9:21.07:273,21,0	0/0:18,0:18:48.16:0,48,701	0/0:30,0:30:74.92:0,75,1011	1/1:0,19:19:45.15:584,45,0	0/0:26,0:26:75.21:0,75,1077	0/0:24,0:24:72.24:0,72,1079	0/0:24,0:24:72.24:0,72,1079	0/0:23,0:23:66.22:0,66,988	0/0:23,0:23:66.22:0,66,990	0/0:12,0:12:36.12:0,36,539	0/0:24,0:24:72.23:0,72,1044	0/0:32,0:32:90.22:0,90,1263	0/0:14,0:14:42.13:0,42,609	1/1:0,32:32:96.31:1246,96,0	1/1:0,31:31:87.28:1130,87,0	0/0:37,0:37:99:0,108,1616	0/0:12,0:12:36.12:0,36,540	0/0:14,0:14:42.13:0,42,601	0/0:28,0:28:84.27:0,84,1229	0/0:32,0:32:84.27:0,84,1237	0/0:22,0:22:63.20:0,63,926	0/0:28,0:28:81.27:0,81,1200	0/0:41,0:40:99:0,120,1738	0/0:18,0:18:54.18:0,54,810	0/0:27,0:27:81.27:0,81,1213	0/0:23,0:23:69.22:0,69,1015	0/0:8,0:8:24.08:0,24,360
chr10	21300759	.	G	GGA	1435.83	PASS	AB=1.000;AC=40;AF=0.952;AN=42;BaseQRankSum=-1.732;DP=593;FS=0.000;HRun=0;HaplotypeScore=117.6920;InbreedingCoeff=0.0341;MQ=65.16;MQ0=11;MQRankSum=1.083;QD=3.26;ReadPosRankSum=-1.083;VQSLOD=2.3754;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:25:6:55,6,0	1/1:9,0:9:4.25:30,4,0	./.	./.	./.	1/1:20,0:20:3:25,3,0	1/1:25,0:25:3.01:41,3,0	./.	0/1:19,0:19:5.80:41,0,6	1/1:29,0:29:19.32:151,19,0	./.	1/1:28,0:26:21.01:209,21,0	1/1:18,0:18:15.01:157,15,0	1/1:23,0:22:8.13:71,8,0	1/1:8,0:8:2.99:24,3,0	1/1:23,0:22:6:53,6,0	./.	1/1:20,0:20:20.98:159,21,0	1/1:19,0:17:2.37:8,2,0	1/1:32,0:31:6.01:67,6,0	./.	1/1:16,0:16:3:25,3,0	0/1:23,0:23:0:0,0,0	1/1:28,1:29:14.99:143,15,0	1/1:21,0:21:6.01:66,6,0	1/1:25,3:29:15.08:111,15,0	1/1:15,0:15:3:25,3,0	1/1:8,0:8:9.75:56,10,0
chr10	21300810	.	G	GAA	3703.29	PASS	AB=1.000;AC=22;AF=0.393;AN=56;BaseQRankSum=15.104;DP=630;FS=12.163;HRun=1;HaplotypeScore=118.8578;InbreedingCoeff=0.6695;MQ=62.55;MQ0=7;MQRankSum=2.778;QD=11.98;ReadPosRankSum=1.582;VQSLOD=-0.4874;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:28:62.28:465,62,0	1/1:14,0:14:9.90:143,10,0	0/0:20,0:10:23.03:0,23,223	0/0:32,0:10:12.70:0,13,159	1/1:34,0:34:81.18:641,81,0	0/0:17,0:17:32.96:0,33,272	0/0:22,0:22:21.43:0,21,279	0/0:24,0:24:61.28:0,61,551	0/0:18,0:18:38.62:0,39,284	0/1:33,0:33:16.24:378,0,16	1/1:8,20:26:53.04:330,53,0	0/0:29,0:28:17.43:0,17,339	0/1:24,0:24:9.60:10,0,297	0/0:21,0:21:19.75:0,20,235	1/1:23,0:23:46.97:401,47,0	1/1:20,0:19:7.88:185,8,0	0/1:3,0:3:10.99:37,0,11	0/0:15,0:15:12.43:0,12,149	1/1:16,0:15:41.86:343,42,0	1/1:43,0:42:93.23:728,93,0	1/1:19,0:19:6.41:29,6,0	0/0:18,0:18:35.49:0,35,298	0/0:6,0:6:11.78:0,12,100	0/0:27,0:27:29.93:0,30,370	0/0:28,0:28:47.61:0,48,480	0/1:24,0:24:14.28:14,0,362	0/0:23,0:23:44.73:0,45,353	0/0:21,0:20:46.60:0,47,362
chr10	21300811	.	A	AAT	7291.78	PASS	AB=0.993;AC=18;AF=0.321;AN=56;BaseQRankSum=-0.606;DP=625;FS=30.073;HRun=0;HaplotypeScore=120.8909;InbreedingCoeff=0.6392;MQ=63.69;MQ0=5;MQRankSum=0.736;QD=28.05;ReadPosRankSum=2.953;VQSLOD=3.8696;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:28:27.90:865,28,0	0/1:13,0:13:11.58:288,0,12	0/0:21,0:11:30.03:0,30,422	0/0:32,0:10:14.40:0,14,319	1/1:34,0:34:81.28:1297,81,0	0/0:16,0:16:36.11:0,36,524	0/0:21,0:21:41.20:0,41,580	0/0:24,0:24:66.21:0,66,999	0/0:19,0:19:42.08:0,42,543	0/1:32,0:33:91.42:791,0,91	1/1:26,1:25:54.16:636,54,0	0/0:27,0:27:67.81:0,68,837	0/0:23,0:23:57.66:0,58,726	0/0:22,0:22:38.59:0,39,498	1/1:23,0:23:29.23:788,29,0	0/1:20,0:20:40.64:382,0,41	0/1:3,0:3:5.89:77,0,6	0/0:15,0:15:39.46:0,39,419	1/1:2,14:17:48.10:728,48,0	1/1:40,0:39:69.79:1405,70,0	1/1:5,15:21:3.48:35,3,0	0/0:17,0:17:39.12:0,39,569	0/0:6,0:6:11.94:0,12,184	0/0:27,0:27:61.85:0,62,785	0/0:28,0:28:65.85:0,66,930	0/0:22,1:23:3.39:0,3,647	0/0:23,0:23:50.22:0,50,683	0/0:21,0:20:53.12:0,53,720
chr10	21301675	.	ATGTGTGTG	A	1974.99	PASS	AB=0.630;AC=6;AF=0.111;AN=54;BaseQRankSum=3.336;DP=740;FS=17.943;HRun=0;HaplotypeScore=170.9834;InbreedingCoeff=0.6410;MQ=62.27;MQ0=13;MQRankSum=-7.264;QD=21.94;ReadPosRankSum=1.003;VQSLOD=2.3114;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:50:48.56:0,49,1224	1/1:2,9:12:24.08:519,24,0	./.	0/0:35,0:16:3.01:0,3,63	0/1:9,9:19:0.26:71,0,0	0/0:14,0:25:18.05:0,18,435	0/0:17,0:29:27.08:0,27,867	0/0:31,0:31:33.89:0,34,813	0/0:15,0:29:21.05:0,21,672	0/0:36,0:37:69.20:0,69,2171	0/0:12,0:13:30.09:0,30,892	0/0:8,0:24:21.07:0,21,723	0/0:13,0:28:27.56:0,28,817	0/0:17,0:29:37.01:0,37,1258	1/1:16,16:33:12.77:573,13,0	0/1:8,17:26:62.75:944,0,63	0/0:20,0:21:33.57:0,34,1018	0/0:8,0:22:18.06:0,18,618	0/0:21,0:22:38.33:0,38,1008	0/0:29,0:29:51.18:0,51,1641	0/0:24,0:26:41.83:0,42,961	0/0:16,0:29:24.54:0,25,739	0/0:13,0:19:18.06:0,18,599	0/0:10,0:21:18.06:0,18,521	0/0:17,0:32:27.08:0,27,870	0/0:23,0:33:61.70:0,62,1631	0/0:10,0:16:18.51:0,19,502	0/0:1,0:6:6.02:0,6,209
chr10	21303146	.	A	AGT	4150.88	PASS	AB=0.830;AC=22;AF=0.393;AN=56;BaseQRankSum=-6.535;DP=607;FS=2.659;HRun=0;HaplotypeScore=98.5021;InbreedingCoeff=0.6536;MQ=70.87;MQ0=3;MQRankSum=0.608;QD=15.78;ReadPosRankSum=0.270;VQSLOD=3.4440;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:12,16:27:4.13:529,4,0	1/1:15,0:15:14.97:171,15,0	0/0:36,0:21:11.87:0,12,119	0/0:30,0:19:9.99:0,10,131	1/1:11,0:14:2.59:11,3,0	0/0:34,0:34:72.21:0,72,840	0/0:17,0:17:27.08:0,27,315	0/0:29,0:29:26.97:0,27,360	0/0:19,0:21:41.94:0,42,458	0/1:11,13:25:56.75:519,0,57	1/1:5,14:19:33.11:517,33,0	0/0:20,0:21:50.98:0,51,574	0/1:19,1:21:8.07:8,0,360	0/0:19,0:19:39.10:0,39,444	1/1:14,0:14:9:78,9,0	1/1:20,0:23:6:52,6,0	1/1:3,16:20:48.16:739,48,0	0/1:19,0:21:9.36:9,0,332	0/1:13,8:21:1.84:433,0,2	1/1:3,19:22:16.30:707,16,0	1/1:11,7:18:24.08:376,24,0	0/0:18,0:18:33.09:0,33,385	0/0:17,0:17:30.09:0,30,350	0/0:28,0:28:42.22:0,42,711	0/0:17,0:17:34.34:0,34,388	0/0:28,0:29:59.97:0,60,679	0/0:19,0:19:45.13:0,45,525	0/0:8,0:8:11.99:0,12,125
chr10	21303374	.	TA	T	1415.36	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=10.817;DP=562;FS=3.692;HRun=10;HaplotypeScore=56.7513;InbreedingCoeff=0.9477;MQ=73.17;MQ0=1;MQRankSum=0.448;QD=18.87;ReadPosRankSum=0.800;VQSLOD=4.4643;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:64.40:0,64,689	1/1:1,10:11:29.99:260,30,0	0/0:13,0:12:12.02:0,12,124	0/0:11,0:11:15.04:0,15,159	1/1:2,17:20:50.94:435,51,0	0/0:30,0:30:78.19:0,78,848	0/0:19,0:19:51.09:0,51,542	0/0:32,1:34:31.30:0,31,649	0/0:13,0:13:36.10:0,36,398	0/0:28,0:28:66.15:0,66,713	0/0:26,0:26:66.13:0,66,698	0/0:23,0:23:63.17:0,63,697	0/0:15,0:15:36.10:0,36,398	0/0:17,0:17:45.11:0,45,489	1/1:1,21:22:47.99:417,48,0	1/1:3,19:22:28.53:463,29,0	0/0:24,0:24:63.12:0,63,669	0/0:14,0:14:4.17:0,4,255	0/0:25,0:25:37.12:0,37,623	0/0:27,0:27:78.16:0,78,829	0/0:14,0:14:33.07:0,33,355	0/0:14,0:16:47.92:0,48,498	0/0:14,0:14:39.07:0,39,408	0/0:21,0:21:60.15:0,60,656	0/0:12,0:12:30.07:0,30,324	0/0:24,0:24:63.16:0,63,691	0/0:26,0:26:78.18:0,78,843	0/0:18,0:18:45.04:0,45,457
chr10	21307507	.	T	TAA	2071.54	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-8.825;DP=613;FS=3.373;HRun=8;HaplotypeScore=73.3487;InbreedingCoeff=0.9517;MQ=74.86;MQ0=0;MQRankSum=0.048;QD=27.26;ReadPosRankSum=2.784;VQSLOD=3.5928;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:56:99:0,141,1534	1/1:1,4:6:11.53:150,12,0	0/0:22,0:22:20.72:0,21,489	0/0:15,0:16:22.69:0,23,253	1/1:5,16:22:39.60:620,40,0	0/0:21,0:21:63.17:0,63,702	0/0:13,0:13:36.10:0,36,401	0/0:24,0:25:64.09:0,64,660	0/0:17,0:17:48.10:0,48,517	0/0:22,0:22:63.15:0,63,690	0/0:13,0:13:33.07:0,33,357	0/0:33,0:33:90.19:0,90,975	0/0:28,0:28:84.19:0,84,917	0/0:26,0:26:75.13:0,75,796	1/1:2,26:28:60.20:952,60,0	1/1:5,14:20:5.17:499,5,0	0/0:27,0:27:75.12:0,75,794	0/0:21,0:21:57.11:0,57,612	0/0:25,0:25:53.84:0,54,560	0/0:23,0:23:63.16:0,63,696	0/0:16,0:16:48.11:0,48,526	0/0:15,0:15:42.11:0,42,468	0/0:24,0:24:60.11:0,60,653	0/0:20,0:20:54.11:0,54,591	0/0:22,0:22:66.10:0,66,703	0/0:22,0:22:63.16:0,63,694	0/0:23,0:23:60.11:0,60,659	0/0:7,0:7:20.85:0,21,187
chr10	21308311	.	A	AGAGG	4495.53	PASS	AB=0.794;AC=24;AF=0.429;AN=56;BaseQRankSum=-1.778;DP=573;FS=2.666;HRun=0;HaplotypeScore=117.2026;InbreedingCoeff=0.6136;MQ=60.68;MQ0=18;MQRankSum=2.880;QD=14.60;ReadPosRankSum=0.452;VQSLOD=4.4482;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:17:30.26:0,30,265	0/0:11,0:11:29.73:0,30,231	0/0:25,0:9:20.63:0,21,164	0/0:26,0:9:6.65:0,7,88	0/0:42,0:41:59.68:0,60,453	1/1:23,0:23:13.85:218,14,0	1/1:13,0:12:4.76:162,5,0	0/1:32,0:31:2.67:411,0,3	1/1:11,0:11:32.18:298,32,0	0/0:18,0:18:37.67:0,38,310	0/0:13,0:13:17.98:0,18,151	1/1:3,17:20:6.02:158,6,0	1/1:22,0:21:36.45:505,36,0	1/1:21,0:20:10.83:380,11,0	0/0:17,0:17:14.91:0,15,148	0/0:16,0:15:14.96:0,15,148	0/0:19,0:19:31.93:0,32,278	1/1:2,16:19:6.02:157,6,0	0/0:18,0:18:43.18:0,43,320	0/0:20,0:20:32.83:0,33,291	0/0:4,0:4:2.88:0,3,25	1/1:19,0:19:38.52:359,39,0	1/1:15,0:15:29.58:340,30,0	0/1:7,11:20:22.99:89,0,23	1/1:24,1:24:31.12:584,31,0	0/1:30,0:30:27.03:668,0,27	0/1:9,24:34:99:167,0,100	0/0:17,0:15:0.47:0,0,1
chr10	21308332	.	GAGAGAGAGAGAGAGAGAGAGAGAGAA	G	1751.82	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=0.498;DP=600;FS=3.113;HRun=0;HaplotypeScore=304.7211;InbreedingCoeff=0.7883;MQ=52.32;MQ0=21;MQRankSum=-3.756;QD=17.70;ReadPosRankSum=-2.169;VQSLOD=1.6902;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:22:42.14:0,42,2114	1/1:14,0:14:23.92:491,24,0	0/0:13,0:3:1.20:0,1,8	0/0:18,0:2:3.01:0,3,57	1/1:17,28:44:14.92:567,15,0	0/0:27,0:27:51.47:0,51,2985	0/0:15,0:14:33.54:0,34,2147	0/0:36,0:35:83.97:0,84,2388	0/0:15,0:15:42.14:0,42,2765	0/0:25,0:25:74.44:0,74,3904	0/0:19,0:19:38.20:0,38,2710	0/0:22,0:21:26.96:0,27,1529	0/0:22,0:21:55.56:0,56,3457	0/0:23,0:22:49.14:0,49,3050	1/1:3,17:20:5.86:411,6,0	1/1:5,15:19:8.49:427,8,0	0/0:20,0:20:42.56:0,43,2564	0/0:16,0:15:18.05:0,18,1105	0/0:16,0:16:37.12:0,37,1603	0/0:24,0:23:25.22:0,25,1441	0/0:4,0:4:6.49:0,6,188	0/0:26,0:26:58.05:0,58,2964	0/0:16,0:16:31.25:0,31,2114	0/0:22,0:22:36.02:0,36,1705	0/0:22,0:21:39.11:0,39,2420	0/0:28,0:28:78.26:0,78,5575	0/0:31,0:29:31.92:0,32,2829	0/0:17,0:15:2.60:0,3,10
chr10	21308354	.	GAGAA	G	628.62	PASS	AB=0.987;AC=17;AF=0.304;AN=56;BaseQRankSum=5.169;DP=636;FS=61.318;HRun=0;HaplotypeScore=136.0821;InbreedingCoeff=0.1627;MQ=70.42;MQ0=20;MQRankSum=-1.370;QD=2.15;ReadPosRankSum=-2.721;VQSLOD=-0.4959;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:22:6.18:6,0,219	1/1:11,0:11:29.81:235,30,0	0/1:27,0:15:9.44:9,0,82	0/0:43,0:21:5.02:0,5,160	1/1:32,0:31:11.82:98,12,0	0/0:33,0:33:69.43:0,69,603	0/0:20,0:19:35.91:0,36,516	0/0:31,0:30:22.36:0,22,433	0/0:17,0:17:13.56:0,14,390	0/1:25,0:25:30.20:30,0,487	0/0:15,0:15:11.55:0,12,281	0/0:23,0:22:41.75:0,42,398	0/1:22,0:21:48.74:49,0,332	0/0:24,0:23:39.96:0,40,536	1/1:17,0:17:5.95:66,6,0	1/1:16,0:15:8.52:81,9,0	0/1:20,3:23:55.66:56,0,312	0/0:21,0:20:38.90:0,39,391	0/1:18,0:18:35.20:35,0,286	0/0:25,3:27:4.34:0,4,415	0/0:6,0:6:11.85:0,12,95	0/1:26,0:26:44.36:44,0,326	0/0:23,0:23:50.82:0,51,473	0/0:23,0:23:22.23:0,22,418	0/1:18,0:18:25.76:26,0,278	0/1:34,0:34:65.32:65,0,838	0/0:24,0:23:35.73:0,36,522	0/0:11,0:9:6:0,6,54
chr10	21310872	.	CA	C	4804.67	PASS	AB=0.847;AC=41;AF=0.732;AN=56;BaseQRankSum=8.351;DP=526;FS=4.232;HRun=12;HaplotypeScore=68.2126;InbreedingCoeff=0.7240;MQ=71.63;MQ0=1;MQRankSum=-0.858;QD=12.35;ReadPosRankSum=3.202;VQSLOD=5.0232;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,15:23:14.34:295,14,0	1/1:0,0:13:26.48:76,26,0	0/1:17,0:13:7.58:8,0,106	0/1:19,0:14:41.11:41,0,80	1/1:1,0:26:46.84:135,47,0	1/1:0,13:13:29.88:232,30,0	1/1:0,4:5:11:76,11,0	1/1:11,16:27:41.75:325,42,0	1/1:2,12:14:26.89:209,27,0	0/0:23,0:24:25.97:0,26,413	0/0:24,1:25:39.86:0,40,572	1/1:0,17:17:47.82:371,48,0	1/1:5,13:18:29.86:232,30,0	1/1:4,16:21:15.54:259,16,0	1/1:1,0:13:22.40:65,22,0	1/1:3,0:21:36.66:106,37,0	0/0:29,2:32:31.51:0,32,668	1/1:5,14:19:44.76:343,45,0	0/0:20,1:23:21.51:0,22,366	0/0:22,0:24:39.79:0,40,554	0/0:9,0:9:23.86:0,24,217	1/1:2,11:13:29.87:232,30,0	1/1:4,18:22:20.29:341,20,0	1/1:3,8:10:17.92:139,18,0	1/1:3,17:21:46.85:354,47,0	1/1:3,24:27:13.81:473,14,0	1/1:2,14:16:35.67:275,36,0	0/1:2,11:13:22.02:217,0,22
chr10	21311338	.	T	TA	2538.81	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-11.811;DP=656;FS=5.751;HRun=7;HaplotypeScore=61.1539;InbreedingCoeff=0.9985;MQ=84.53;MQ0=0;MQRankSum=-1.663;QD=29.18;ReadPosRankSum=1.476;VQSLOD=4.3954;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:72.07:0,72,683	1/1:1,7:8:21.06:254,21,0	0/0:22,0:22:48.05:0,48,453	0/0:26,0:26:45.03:0,45,424	1/1:3,27:30:72.18:853,72,0	0/0:32,0:32:87.12:0,87,834	0/0:23,0:23:63.10:0,63,608	0/0:35,0:35:84.11:0,84,807	0/0:27,0:27:75.11:0,75,720	0/0:25,0:25:69.11:0,69,666	0/0:20,0:20:48.07:0,48,464	0/0:21,0:21:57.09:0,57,550	0/0:27,0:27:78.08:0,78,734	0/0:31,0:31:87.14:0,87,840	1/1:2,16:18:45.14:543,45,0	1/1:1,30:31:87.27:1049,87,0	0/0:25,0:25:66.10:0,66,637	0/0:20,0:20:57.08:0,57,544	0/0:16,0:16:42.06:0,42,405	0/0:28,0:28:78.11:0,78,750	0/0:16,0:16:45.07:0,45,435	0/0:20,0:20:51.07:0,51,492	0/0:18,0:18:45.07:0,45,435	0/0:16,0:16:42.05:0,42,399	0/0:25,0:25:63.10:0,63,608	0/0:29,0:29:78.12:0,78,753	0/0:30,0:30:84.10:0,84,796	0/0:11,0:11:27.04:0,27,260
chr10	21312096	.	T	TA	10285.01	PASS	AB=0.856;AC=53;AF=0.946;AN=56;BaseQRankSum=-4.067;DP=596;FS=8.746;HRun=11;HaplotypeScore=72.0105;InbreedingCoeff=-0.0562;MQ=75.55;MQ0=0;MQRankSum=-2.849;QD=17.26;ReadPosRankSum=1.479;VQSLOD=5.6066;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,38:46:26.27:786,26,0	1/1:4,1:18:5.81:106,6,0	0/1:17,0:16:36.22:36,0,117	0/1:14,0:14:17.56:18,0,115	1/1:5,4:23:35.10:201,35,0	1/1:2,13:15:15.84:342,16,0	1/1:2,18:20:27.86:464,28,0	1/1:5,19:24:33.82:498,34,0	1/1:2,13:15:30.06:305,30,0	1/1:6,20:26:27.80:441,28,0	1/1:1,7:8:14.99:141,15,0	1/1:2,14:16:15.85:342,16,0	1/1:4,18:22:51.10:517,51,0	1/1:5,13:18:21.84:396,22,0	1/1:3,2:23:39.68:200,40,0	1/1:2,1:17:31.45:174,31,0	1/1:4,17:21:24.86:434,25,0	0/1:8,25:33:23.88:490,0,24	1/1:4,21:27:68.78:660,69,0	1/1:5,17:22:53.83:500,54,0	1/1:3,20:23:48.10:487,48,0	1/1:4,17:21:39.08:396,39,0	1/1:5,23:28:45.56:458,46,0	1/1:5,19:24:48.10:487,48,0	1/1:6,17:24:30.69:472,31,0	1/1:3,13:17:21.62:367,22,0	1/1:7,11:18:33.06:334,33,0	1/1:4,10:15:6.66:235,7,0
chr10	21314354	.	TA	T	439.98	PASS	AB=0.933;AC=3;AF=0.054;AN=56;BaseQRankSum=4.910;DP=641;FS=19.968;HRun=10;HaplotypeScore=77.2552;InbreedingCoeff=0.6408;MQ=73.22;MQ0=0;MQRankSum=1.470;QD=10.48;ReadPosRankSum=-2.276;VQSLOD=0.5890;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,105,1153	0/0:7,0:7:20.20:0,20,117	0/1:13,1:14:18.61:19,0,244	0/0:21,1:21:20.42:0,20,346	0/0:29,0:29:27.49:0,27,370	0/0:21,0:21:49.34:0,49,510	0/0:27,0:28:72.01:0,72,763	0/0:18,0:18:48.13:0,48,531	0/0:37,0:37:99:0,102,1125	0/0:18,1:19:22.08:0,22,472	0/0:15,0:15:30.08:0,30,331	0/0:27,0:27:75.07:0,75,774	0/0:28,0:28:72.17:0,72,781	0/0:25,0:25:60.16:0,60,663	0/0:23,0:23:58.43:0,58,344	0/0:34,0:34:71.13:0,71,521	0/0:30,1:31:52.05:0,52,832	0/0:24,0:24:69.15:0,69,748	0/0:21,1:22:48.10:0,48,510	0/0:23,0:23:57.15:0,57,623	0/0:10,0:10:27.07:0,27,297	0/0:13,0:13:22.38:0,22,352	0/0:16,0:16:42.11:0,42,464	0/0:16,0:16:42.10:0,42,457	0/0:23,0:23:66.13:0,66,688	0/0:36,0:36:95.99:0,96,1035	1/1:2,25:28:62.02:527,62,0	0/0:10,0:10:21.06:0,21,232
chr10	21319014	.	GAC	G	15570.28	PASS	AB=0.621;AC=43;AF=0.768;AN=56;BaseQRankSum=-11.023;DP=862;FS=4.436;HRun=0;HaplotypeScore=127.4989;InbreedingCoeff=0.9011;MQ=71.05;MQ0=6;MQRankSum=-2.878;QD=24.33;ReadPosRankSum=3.031;VQSLOD=5.8446;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,34:37:81.25:997,81,0	0/0:6,0:19:33.02:0,33,331	0/0:48,0:32:48.25:0,48,622	0/0:43,0:32:36.91:0,37,550	0/0:13,0:40:93.01:0,93,884	1/1:3,19:23:54:642,54,0	1/1:7,17:24:39.12:480,39,0	1/1:15,28:44:85.63:1001,86,0	1/1:3,22:25:51.16:628,51,0	1/1:4,33:37:99:1133,99,0	1/1:0,13:13:33.02:372,33,0	1/1:9,31:39:78.24:960,78,0	1/1:2,30:32:69.22:849,69,0	1/1:11,26:38:69.05:825,69,0	0/0:6,0:42:81.01:0,81,755	0/0:6,0:30:68.99:0,69,627	1/1:5,26:33:65.87:766,66,0	0/1:7,11:18:17.86:333,0,18	1/1:7,14:21:42.13:516,42,0	1/1:3,18:21:39.12:480,39,0	1/1:7,17:24:41.72:490,42,0	1/1:4,24:28:54.17:664,54,0	1/1:2,27:29:60.07:738,60,0	1/1:6,24:30:54.17:665,54,0	1/1:5,22:27:60.66:740,61,0	1/1:7,28:35:47.75:935,48,0	1/1:7,32:41:83.92:988,84,0	1/1:7,12:19:30.09:369,30,0
chr10	21319510	.	ATGTG	A	1649.91	PASS	AB=0.844;AC=15;AF=0.288;AN=52;BaseQRankSum=6.368;DP=714;FS=6.801;HRun=0;HaplotypeScore=124.1755;InbreedingCoeff=0.5105;MQ=56.36;MQ0=14;MQRankSum=0.906;QD=6.47;ReadPosRankSum=0.727;VQSLOD=2.0429;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:45:7.29:93,0,7	0/0:8,0:8:15.05:0,15,329	./.	./.	0/1:27,0:28:35.37:35,0,636	0/0:28,0:29:32.99:0,33,889	0/0:27,0:33:47.32:0,47,764	0/0:26,0:26:25.77:0,26,345	0/0:26,0:26:30.04:0,30,569	1/1:17,16:32:48.40:607,48,0	1/1:6,8:14:11.93:190,12,0	0/0:25,0:26:48.55:0,49,806	0/0:32,0:32:13.94:0,14,909	0/1:19,1:19:17.50:18,0,476	0/0:29,0:31:45.57:0,46,1025	0/0:17,0:19:24.69:0,25,518	0/1:11,19:30:13.39:439,0,13	0/0:13,0:20:2.89:0,3,384	1/1:14,0:14:8.15:55,8,0	1/1:7,5:12:12.04:190,12,0	1/1:25,14:39:12.04:190,12,0	0/0:20,0:20:44.85:0,45,754	0/0:23,0:25:47.83:0,48,857	0/0:39,0:40:66.66:0,67,1294	0/0:22,0:22:35.28:0,35,656	0/0:29,0:30:56.89:0,57,1017	0/0:18,0:19:26.77:0,27,499	0/1:17,0:17:4:4,0,646
chr10	21320030	.	CTT	C	3538.64	PASS	AB=0.688;AC=37;AF=0.661;AN=56;BaseQRankSum=1.038;DP=547;FS=16.229;HRun=16;HaplotypeScore=75.4562;InbreedingCoeff=0.3487;MQ=66.74;MQ0=9;MQRankSum=1.327;QD=8.35;ReadPosRankSum=4.557;VQSLOD=-0.1070;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:33:65.79:0,66,748	1/1:2,3:9:8.58:103,9,0	0/0:25,0:14:10.65:0,11,72	0/0:13,0:9:8.89:0,9,84	1/1:8,9:20:15.15:146,15,0	0/1:12,11:25:3.61:214,0,4	1/1:9,9:19:21.66:203,22,0	1/1:20,14:34:44.36:363,44,0	1/1:10,8:18:5.83:199,6,0	0/0:14,0:16:1.23:0,1,51	0/1:9,1:12:33.64:34,0,37	0/1:7,6:13:15.22:41,0,15	1/1:7,10:18:25.97:197,26,0	1/1:15,12:29:24.87:195,25,0	1/1:9,10:20:23.34:187,23,0	1/1:6,17:24:38:325,38,0	0/1:11,2:29:6.17:6,0,139	1/1:3,4:7:11.92:96,12,0	0/0:11,0:15:18.59:0,19,115	0/0:8,0:13:7.44:0,7,76	0/1:13,1:21:26.23:26,0,42	1/1:4,2:7:4.83:48,5,0	1/1:7,11:19:26.53:232,27,0	0/1:5,7:12:18.64:130,0,19	1/1:9,11:20:26.67:225,27,0	0/1:14,9:24:9.97:169,0,10	1/1:7,15:23:32.42:262,32,0	1/1:7,6:15:3.07:138,3,0
chr10	21320213	.	G	GTGTGTG	1850.88	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=8.802;DP=764;FS=5.462;HRun=0;HaplotypeScore=221.5140;InbreedingCoeff=0.7895;MQ=56.51;MQ0=2;MQRankSum=-7.884;QD=17.97;ReadPosRankSum=1.801;VQSLOD=2.8788;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:88.87:0,89,1849	0/1:13,0:13:6.26:179,0,6	0/0:34,0:30:68.48:0,68,960	0/0:13,0:11:27.04:0,27,464	0/0:9,24:37:0:0,0,0	0/0:20,0:20:54.17:0,54,1107	0/0:24,0:24:66.17:0,66,1277	0/0:37,0:36:96.24:0,96,1698	0/0:25,0:25:69.21:0,69,1463	0/0:28,0:28:81.25:0,81,1696	0/0:21,0:21:60.18:0,60,1232	0/0:25,0:25:57.20:0,57,1256	0/0:25,0:25:72.23:0,72,1543	0/0:27,0:27:57.16:0,57,1191	1/1:39,0:39:29.31:647,29,0	1/1:51,0:51:38.14:1153,38,0	0/0:26,0:25:63.22:0,63,1389	0/0:20,0:20:51.02:0,51,928	0/0:14,0:13:36.06:0,36,505	0/0:31,0:31:81.24:0,81,1754	0/0:26,0:26:66.18:0,66,1317	0/0:27,0:27:72.20:0,72,1469	0/0:30,0:30:32.25:0,32,1518	0/0:27,0:27:75.20:0,75,1527	0/0:24,0:24:69.22:0,69,1468	0/0:29,0:29:84.28:0,84,1866	0/0:34,0:32:96.25:0,96,1901	0/0:15,0:15:45.11:0,45,868
chr10	21322580	.	C	CT	2322.09	PASS	AB=0.668;AC=13;AF=0.232;AN=56;BaseQRankSum=-7.129;DP=613;FS=3.102;HRun=11;HaplotypeScore=69.0708;InbreedingCoeff=0.6482;MQ=66.75;MQ0=3;MQRankSum=-0.157;QD=14.98;ReadPosRankSum=-0.448;VQSLOD=4.1389;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:9,16:26:5.02:356,0,5	0/0:1,0:10:14.26:0,14,41	0/0:30,0:13:2.58:0,3,53	0/0:33,1:18:3.07:0,3,30	0/0:4,0:25:40.72:0,41,118	0/0:23,0:23:56.73:0,57,441	0/0:16,0:16:41.07:0,41,319	0/0:29,0:29:53.74:0,54,418	0/0:18,0:18:44.80:0,45,348	1/1:11,18:29:35.98:516,36,0	1/1:2,22:24:42.86:605,43,0	0/0:22,0:22:44.80:0,45,348	0/0:18,2:20:11.38:0,11,271	0/0:15,0:17:38.42:0,38,288	0/0:4,0:31:55.94:0,56,176	0/0:4,0:14:26.34:0,26,105	1/1:6,12:18:10.49:254,10,0	0/0:23,0:22:53.75:0,54,418	1/1:8,11:19:29.98:277,30,0	0/1:5,16:20:18.58:354,0,19	1/1:2,7:9:12.02:122,12,0	0/0:21,3:24:23.29:0,23,364	0/0:21,0:22:56.72:0,57,437	0/0:19,1:20:17.45:0,17,318	0/0:23,0:23:50.75:0,51,395	0/0:26,0:26:66.98:0,67,510	0/0:30,0:30:62.73:0,63,487	0/1:7,2:9:15.34:15,0,97
chr10	21323116	.	GC	G	4273.47	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=6.444;DP=766;FS=2.711;HRun=2;HaplotypeScore=84.1310;InbreedingCoeff=1.0000;MQ=84.08;MQ0=0;MQRankSum=-1.556;QD=35.91;ReadPosRankSum=4.622;VQSLOD=5.3726;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:87.26:0,87,1266	1/1:0,17:17:51.17:661,51,0	0/0:30,0:30:77.91:0,78,1086	0/0:26,0:26:66.19:0,66,953	1/1:1,25:26:72.23:930,72,0	0/0:28,0:28:75.21:0,75,1064	0/0:25,0:25:75.25:0,75,1122	0/0:30,0:30:81.26:0,81,1214	0/0:25,0:25:75.25:0,75,1120	0/0:25,0:25:72.24:0,72,1062	0/0:26,0:26:63.20:0,63,923	0/0:29,0:29:87.29:0,87,1304	0/0:38,0:38:99:0,108,1599	0/0:26,0:26:78.25:0,78,1149	1/1:0,37:37:99:1402,108,0	1/1:2,37:39:61.67:1281,62,0	0/0:26,0:26:75.25:0,75,1124	0/0:16,0:16:48.09:0,48,691	0/0:21,0:21:57.18:0,57,830	0/0:33,0:33:96.28:0,96,1378	0/0:37,0:37:99:0,111,1620	0/0:32,0:32:90.28:0,90,1309	0/0:22,0:22:60.18:0,60,870	0/0:23,0:23:69.23:0,69,1034	0/0:15,0:15:45.15:0,45,675	0/0:28,0:28:78.25:0,78,1133	0/0:38,0:38:99:0,114,1682	0/0:18,0:18:54.18:0,54,808
chr10	21324017	.	TCC	T	3797.99	PASS	AB=0.676;AC=30;AF=0.536;AN=56;BaseQRankSum=-5.981;DP=495;FS=29.958;HRun=12;HaplotypeScore=82.7053;InbreedingCoeff=0.5126;MQ=79.76;MQ0=1;MQRankSum=-1.500;QD=11.58;ReadPosRankSum=3.047;VQSLOD=0.2711;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,33:41:93.13:944,93,0	1/1:6,0:6:2.20:7,2,0	0/0:25,0:22:35.37:0,35,337	0/0:15,0:13:0.18:0,0,55	1/1:20,0:20:13.53:44,14,0	0/0:4,0:19:20.47:0,20,87	0/0:5,0:15:22.96:0,23,95	0/1:18,5:26:19.52:20,0,35	0/0:2,0:13:30.32:0,30,121	1/1:9,19:29:50.80:569,51,0	1/1:3,6:10:17.76:164,18,0	0/1:5,1:13:12.07:12,0,36	0/0:11,0:15:20.65:0,21,139	0/0:7,0:17:20.69:0,21,101	1/1:17,0:17:22.87:81,23,0	1/1:17,0:17:22:71,22,0	1/1:4,29:33:84.17:855,84,0	0/1:1,1:16:2.55:3,0,60	1/1:8,11:19:33.02:336,33,0	1/1:4,13:18:36.06:366,36,0	1/1:1,5:6:15.03:153,15,0	0/1:7,0:9:23.14:49,0,23	0/1:6,1:17:23.80:42,0,24	0/0:4,0:19:32.68:0,33,124	1/1:6,1:12:5.45:40,5,0	0/1:12,3:19:44.25:44,0,52	0/0:8,0:18:17.33:0,17,61	0/0:7,0:11:12.97:0,13,59
chr10	21324027	.	CCCA	C	1195.20	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=1.745;DP=469;FS=2.220;HRun=0;HaplotypeScore=99.8426;InbreedingCoeff=0.8007;MQ=77.83;MQ0=1;MQRankSum=1.387;QD=19.28;ReadPosRankSum=2.264;VQSLOD=3.4802;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,103,539	1/1:0,3:3:2.68:47,3,0	0/0:22,0:19:40.24:0,40,589	0/1:13,0:12:21.42:21,0,85	1/1:0,16:16:29.68:351,30,0	0/0:18,0:18:27.04:0,27,268	0/0:20,0:20:51.02:0,51,498	0/0:20,0:20:37.90:0,38,335	0/0:15,0:15:44.97:0,45,431	0/0:24,0:24:52.03:0,52,258	0/0:11,0:11:15.08:0,15,157	0/0:15,0:15:33.18:0,33,302	0/0:18,0:18:42.43:0,42,378	0/0:16,0:16:30.04:0,30,301	1/1:0,14:14:30.10:458,30,0	1/1:0,16:16:30.10:474,30,0	0/0:34,0:34:90.35:0,90,436	0/0:17,0:17:35.75:0,36,347	0/0:13,0:13:35.28:0,35,177	0/0:16,0:16:38:0,38,183	0/0:7,0:7:16.39:0,16,81	0/0:9,0:9:13.88:0,14,102	0/0:17,0:17:22.18:0,22,207	0/0:21,0:21:53.98:0,54,499	0/0:11,0:11:21.15:0,21,170	0/0:15,0:15:38.41:0,38,325	0/0:14,0:14:27.02:0,27,267	0/0:9,0:9:18.01:0,18,172
chr10	21326033	.	A	AAAACAAAC	8214.71	PASS	AB=0.550;AC=7;AF=0.125;AN=56;BaseQRankSum=-4.943;DP=764;FS=2.724;HRun=0;HaplotypeScore=191.0177;InbreedingCoeff=0.8573;MQ=68.21;MQ0=1;MQRankSum=-11.652;QD=72.06;ReadPosRankSum=-2.305;VQSLOD=4.6583;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:66.22:0,66,1632	1/1:5,6:11:21.07:784,21,0	0/0:24,0:20:18.53:0,19,387	0/0:26,0:24:11.56:0,12,327	1/1:18,21:40:75.25:2487,75,0	0/0:31,0:31:66.22:0,66,1593	0/0:16,0:16:30.09:0,30,707	0/0:38,0:38:68.24:0,68,1495	0/0:18,0:18:45.14:0,45,1101	0/0:33,0:33:69.23:0,69,1666	0/0:31,0:31:44.84:0,45,1595	0/0:32,0:32:69.24:0,69,1742	0/0:39,0:39:99:0,99,2423	0/0:27,0:27:66.20:0,66,1557	1/1:10,17:30:57.19:2271,57,0	0/1:6,27:33:6.37:2673,0,6	0/0:24,0:23:43.03:0,43,1016	0/0:25,0:25:31.47:0,31,958	0/0:15,0:15:36.09:0,36,758	0/0:24,0:25:63.22:0,63,1437	0/0:25,0:25:51.15:0,51,1166	0/0:23,0:23:45.15:0,45,1117	0/0:31,0:31:60.19:0,60,1484	0/0:18,0:18:54.14:0,54,1289	0/0:25,0:25:54.19:0,54,1320	0/0:32,0:32:57.20:0,57,1452	0/0:35,0:34:75.26:0,75,1891	0/0:22,0:22:56.30:0,56,1432
chr10	21327879	.	C	CCCT	2032.94	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-6.283;DP=528;FS=6.508;HRun=0;HaplotypeScore=78.0807;InbreedingCoeff=0.9652;MQ=62.75;MQ0=1;MQRankSum=0.358;QD=31.28;ReadPosRankSum=2.895;VQSLOD=3.8000;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:33.11:0,33,475	1/1:2,12:14:27.09:557,27,0	0/0:17,0:10:6.24:0,6,129	0/0:22,0:17:15.38:0,15,254	1/1:7,10:18:30.10:588,30,0	0/0:25,0:25:48.15:0,48,671	0/0:18,0:18:42.11:0,42,583	0/0:24,0:23:36.11:0,36,505	0/0:26,0:25:63.19:0,63,871	0/0:22,0:22:42.14:0,42,612	0/0:17,0:17:30.10:0,30,426	0/0:8,0:9:21.07:0,21,306	0/0:23,0:23:54.16:0,54,756	0/0:20,0:20:42.13:0,42,593	1/1:5,11:18:21.07:428,21,0	1/1:1,14:15:29.91:619,30,0	0/0:19,0:19:57.19:0,57,822	0/0:15,0:15:36.12:0,36,524	0/0:21,0:21:42.13:0,42,593	0/0:21,0:21:41.87:0,42,596	0/0:17,0:17:33.11:0,33,480	0/0:22,0:22:39.12:0,39,557	0/0:23,0:23:56.91:0,57,781	0/0:21,0:21:57.17:0,57,794	0/0:17,0:17:32.65:0,33,475	0/0:16,0:16:36.12:0,36,522	0/0:21,0:21:57.16:0,57,803	0/0:11,0:11:30.08:0,30,419
chr10	21328425	.	AT	A	2241.13	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=9.634;DP=602;FS=1.393;HRun=9;HaplotypeScore=59.1853;InbreedingCoeff=0.9972;MQ=72.85;MQ0=0;MQRankSum=-1.964;QD=21.34;ReadPosRankSum=1.583;VQSLOD=4.4430;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:57.14:0,57,637	1/1:3,8:11:24.01:220,24,0	0/0:14,0:14:42.09:0,42,457	0/0:16,0:14:25.52:0,26,235	1/1:2,31:33:89.97:809,90,0	0/0:19,0:19:57.17:0,57,658	0/0:20,0:20:54.15:0,54,613	0/0:23,0:23:57.10:0,57,630	0/0:20,0:20:48.14:0,48,554	0/0:26,0:26:69.12:0,69,777	0/0:21,0:21:60.18:0,60,687	0/0:11,0:11:33.09:0,33,373	0/0:22,0:22:63.18:0,63,717	0/0:23,0:23:63.19:0,63,727	1/1:3,29:32:81.04:741,81,0	1/1:5,24:29:69.03:632,69,0	0/0:29,0:29:81.24:0,81,931	0/0:10,0:10:27.06:0,27,301	0/0:25,0:25:57.15:0,57,639	0/0:29,0:29:78.22:0,78,891	0/0:21,0:21:51.14:0,51,579	0/0:18,1:19:26.69:0,27,560	0/0:22,0:22:57.17:0,57,657	0/0:7,0:7:21.06:0,21,242	0/0:26,0:26:69.21:0,69,796	0/0:21,0:21:54.15:0,54,616	0/0:26,0:25:66.20:0,66,760	0/0:25,0:25:63.19:0,63,727
chr10	21330246	.	AAT	A	15027.52	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=0.062;DP=507;FS=6.355;HRun=0;HaplotypeScore=68.4482;InbreedingCoeff=0.7910;MQ=66.93;MQ0=1;MQRankSum=-3.760;QD=30.36;ReadPosRankSum=3.228;VQSLOD=6.5215;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,21:24:51.17:656,51,0	1/1:0,11:11:30.10:386,30,0	0/0:8,0:7:12.04:0,12,201	0/0:4,0:4:2.94:0,3,19	1/1:3,31:34:90.08:1051,90,0	1/1:0,23:23:63.20:811,63,0	1/1:4,2:6:3.01:39,3,0	1/1:14,24:38:75.21:936,75,0	1/1:2,16:18:48.16:618,48,0	1/1:5,17:22:26.29:614,26,0	1/1:3,17:20:48.11:599,48,0	1/1:0,13:13:24.08:309,24,0	1/1:1,17:18:48.16:618,48,0	1/1:0,16:16:45.15:579,45,0	1/1:2,22:24:51.17:656,51,0	1/1:1,18:19:45.15:579,45,0	1/1:2,14:16:39.13:502,39,0	1/1:2,23:25:60.20:772,60,0	1/1:3,11:14:30.10:383,30,0	1/1:0,24:24:72.20:909,72,0	1/1:3,9:12:24.08:309,24,0	1/1:0,7:7:18.06:232,18,0	1/1:3,21:23:44.74:579,45,0	1/1:2,7:9:18.06:232,18,0	1/1:1,23:24:63.20:811,63,0	1/1:1,22:23:66.21:848,66,0	1/1:1,18:19:48.16:618,48,0	1/1:2,10:12:30.10:386,30,0
chr10	21331060	.	T	TG	2357.21	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-7.595;DP=583;FS=21.879;HRun=2;HaplotypeScore=58.3146;InbreedingCoeff=0.9949;MQ=62.72;MQ0=4;MQRankSum=0.648;QD=36.26;ReadPosRankSum=2.277;VQSLOD=1.7818;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:65.88:0,66,905	1/1:1,6:7:18.06:252,18,0	0/0:16,0:14:26.35:0,26,427	0/0:16,0:8:20.99:0,21,239	1/1:0,11:11:30.06:408,30,0	0/0:22,0:22:66.19:0,66,804	0/0:19,0:19:51.14:0,51,617	0/0:32,0:32:90.27:0,90,1106	0/0:22,0:22:60.17:0,60,721	0/0:28,0:27:84.24:0,84,1016	0/0:22,0:22:60.18:0,60,733	0/0:23,0:23:69.20:0,69,831	0/0:20,0:20:57.13:0,57,677	0/0:19,0:19:57.14:0,57,689	1/1:0,27:27:69.23:993,69,0	1/1:0,20:20:60.20:864,60,0	0/0:22,0:22:63.18:0,63,767	0/0:24,0:24:65.55:0,66,772	0/0:27,0:27:72.19:0,72,848	0/0:29,0:29:84.25:0,84,1028	0/0:8,0:8:24.07:0,24,287	0/0:12,0:12:33.10:0,33,409	0/0:9,0:9:24.06:0,24,284	0/0:21,0:21:51.94:0,52,661	0/0:27,0:27:72.18:0,72,872	0/0:27,0:27:78.24:0,78,957	0/0:24,0:24:69.22:0,69,852	0/0:21,0:21:63.17:0,63,754
chr10	21331317	.	TTCTCTCTCTC	T	1491.79	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=0.597;DP=481;FS=13.756;HRun=0;HaplotypeScore=155.0660;InbreedingCoeff=0.6244;MQ=55.08;MQ0=5;MQRankSum=-3.057;QD=8.20;ReadPosRankSum=2.629;VQSLOD=1.8073;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:28:9.47:0,9,98	0/0:4,0:5:3.48:0,3,75	0/0:19,0:9:5.99:0,6,120	0/0:26,0:12:9.03:0,9,240	0/0:5,0:7:9.03:0,9,169	1/1:7,1:11:2.47:15,2,0	1/1:18,9:30:1.72:87,2,0	1/1:7,4:10:9.02:99,9,0	1/1:7,5:13:3.01:88,3,0	0/0:19,0:24:47.19:0,47,1618	0/0:17,0:17:6.02:0,6,191	1/1:10,3:18:1.90:42,2,0	1/1:6,9:18:3.01:89,3,0	1/1:16,2:22:6:74,6,0	0/0:18,0:19:10.03:0,10,323	0/0:6,0:14:21.07:0,21,541	0/0:32,0:34:41.85:0,42,1492	1/1:9,5:17:12.27:552,12,0	0/0:11,0:11:18.06:0,18,734	0/0:17,0:17:12.51:0,13,345	0/0:27,0:37:22.01:0,22,768	1/1:7,0:7:2.99:24,3,0	0/0:2,2:4:0.47:0,0,1	0/0:19,7:33:1.19:0,1,3	0/0:1,0:2:0.47:0,0,1	1/1:7,3:12:10.69:282,11,0	1/1:8,0:10:6.02:134,6,0	1/1:11,1:13:6.02:179,6,0
chr10	21331354	.	TCACG	T	1351.20	PASS	AC=14;AF=0.304;AN=46;BaseQRankSum=-6.404;DP=534;FS=8.121;HRun=0;HaplotypeScore=155.8565;InbreedingCoeff=0.6642;MQ=37.92;MQ0=9;MQRankSum=3.177;QD=8.19;ReadPosRankSum=0.733;VQSLOD=2.5287;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:33,0:32:21.06:305,21,0	0/0:6,0:6:3:0,3,25	./.	0/0:10,0:6:13.07:0,13,127	./.	0/0:19,0:19:5.81:0,6,88	0/0:33,0:32:2.75:0,3,46	0/0:19,0:16:17.97:0,18,199	0/0:21,0:20:15.05:0,15,213	1/1:20,0:20:3.55:166,4,0	1/1:14,0:14:16.93:230,17,0	0/0:30,0:30:5.02:0,5,57	0/0:24,0:23:5.38:0,5,52	0/0:34,0:33:9.03:0,9,135	0/0:18,0:18:12.04:0,12,190	0/0:26,0:26:15.36:0,15,184	1/1:35,0:34:8.04:384,8,0	0/0:19,0:19:20.67:0,21,205	1/1:13,0:9:3.01:48,3,0	1/1:7,8:15:4.68:56,5,0	1/1:35,0:32:21.33:318,21,0	./.	0/0:6,0:6:3.01:0,3,45	./.	0/0:16,0:16:3:0,3,46	0/0:14,0:14:26.43:0,26,259	0/0:16,0:14:13.38:0,13,111	./.
chr10	21332672	.	G	GTGTG	3429.89	PASS	AB=1.000;AC=41;AF=0.759;AN=54;BaseQRankSum=-7.323;DP=640;FS=1.771;HRun=0;HaplotypeScore=136.4121;InbreedingCoeff=0.3384;MQ=56.97;MQ0=9;MQRankSum=4.422;QD=6.55;ReadPosRankSum=-4.208;VQSLOD=1.5371;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:52,0:52:5.91:141,6,0	0/1:6,0:6:0:0,0,0	./.	0/1:29,0:16:0:0,0,0	0/0:33,0:31:3:0,3,28	1/1:19,0:19:5.93:88,6,0	0/1:30,0:30:40.80:65,0,41	1/1:20,0:20:0.47:1,0,0	1/1:16,9:25:6.02:121,6,0	1/1:21,0:21:21.07:376,21,0	1/1:29,0:29:9.03:142,9,0	1/1:22,0:22:6.02:123,6,0	1/1:12,0:12:2.84:71,3,0	1/1:31,0:30:5.81:85,6,0	0/0:19,0:19:39.04:0,39,363	0/0:17,0:17:36.04:0,36,334	0/1:24,0:24:11.75:136,0,12	0/1:27,0:27:31.70:346,0,32	1/1:19,0:18:13.86:239,14,0	1/1:11,0:10:3.01:67,3,0	0/0:28,0:28:2.84:0,3,47	1/1:21,0:21:9.48:165,9,0	1/1:9,0:9:2.89:16,3,0	1/1:33,0:32:26.83:409,27,0	1/1:30,0:29:15.05:232,15,0	1/1:26,0:26:29.73:451,30,0	1/1:13,0:12:3.01:71,3,0	1/1:14,0:14:6.48:82,6,0
chr10	21332846	.	G	GGTGTGT	2965.39	PASS	AB=0.984;AC=44;AF=0.846;AN=52;BaseQRankSum=1.717;DP=660;FS=5.888;HRun=0;HaplotypeScore=172.0186;InbreedingCoeff=0.2713;MQ=59.39;MQ0=12;MQRankSum=-2.685;QD=5.60;ReadPosRankSum=-2.472;VQSLOD=1.2469;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:39:10.63:0,11,113	1/1:10,0:10:3.01:90,3,0	./.	./.	1/1:15,0:15:2.91:24,3,0	0/1:18,0:16:0:0,0,0	1/1:24,6:27:8.26:140,8,0	1/1:21,0:20:8.90:60,9,0	1/1:20,0:20:6.01:188,6,0	1/1:23,0:23:1.83:5,2,0	1/1:15,0:15:5.82:48,6,0	1/1:23,0:22:12.02:206,12,0	1/1:13,0:13:9.03:178,9,0	1/1:28,0:26:5.99:100,6,0	1/1:32,0:30:6.02:180,6,0	1/1:23,0:23:3.01:90,3,0	0/0:21,0:27:3.86:0,4,23	1/1:18,7:26:13.09:264,13,0	0/1:17,0:15:20.90:21,0,28	1/1:17,0:17:11.81:96,12,0	0/1:65,0:64:74.80:75,0,89	1/1:18,0:18:3.01:91,3,0	1/1:12,0:15:6.47:115,6,0	0/1:27,0:28:0.11:0,0,0	1/1:22,0:22:8.64:108,9,0	1/1:16,0:16:9.92:165,10,0	1/1:22,0:19:22.32:576,22,0	1/1:8,0:8:12.51:268,13,0
chr10	21332892	.	T	TGTGTGA	1634.40	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=6.749;DP=578;FS=27.836;HRun=0;HaplotypeScore=138.7184;InbreedingCoeff=-0.0718;MQ=51.23;MQ0=17;MQRankSum=-2.143;QD=5.38;ReadPosRankSum=-3.876;VQSLOD=-0.4649;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:86.55:0,87,739	1/1:6,1:7:6.01:133,6,0	0/0:29,0:15:38.10:0,38,398	0/0:22,0:12:19.40:0,19,272	1/1:20,0:19:35.65:324,36,0	0/1:12,0:11:37.64:38,0,84	0/1:39,0:32:23.23:23,0,409	0/0:17,0:15:28.97:0,29,313	0/1:14,0:13:45.61:46,0,148	0/0:19,0:19:43.08:0,43,379	0/0:16,0:16:27.35:0,27,224	0/1:14,0:13:37.99:183,0,38	0/1:14,0:13:94.86:161,0,95	0/1:24,0:22:27.40:27,0,142	1/1:3,16:23:6.02:216,6,0	1/1:4,11:19:5.95:184,6,0	0/0:20,0:19:38.41:0,38,280	0/1:22,0:21:34.94:35,0,257	0/0:16,0:13:6.16:0,6,222	0/1:17,0:17:13.94:14,0,189	0/0:54,0:54:51.46:0,51,915	0/1:23,0:23:39.13:39,0,172	0/1:19,0:19:63.69:64,0,144	0/0:23,0:22:23.83:0,24,192	0/0:20,0:20:4.05:0,4,233	0/1:10,0:10:14.15:14,0,167	0/1:16,0:14:92.09:225,0,92	0/1:8,0:8:74.83:83,0,75
chr10	21333851	.	A	AT	2747.64	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=-11.002;DP=635;FS=11.833;HRun=6;HaplotypeScore=58.1680;InbreedingCoeff=0.9046;MQ=78.38;MQ0=0;MQRankSum=-0.298;QD=26.42;ReadPosRankSum=1.870;VQSLOD=3.2674;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:63.06:0,63,629	1/1:0,7:7:15.05:189,15,0	0/0:18,0:18:42.06:0,42,411	0/1:12,0:12:2.99:3,0,212	1/1:6,36:42:99:1357,108,0	0/0:26,0:26:75.15:0,75,757	0/0:18,0:18:45.01:0,45,439	0/0:21,0:21:57.11:0,57,571	0/0:16,0:16:45.07:0,45,445	0/0:25,0:25:72.16:0,72,735	0/0:26,0:26:72.11:0,72,709	0/0:31,0:31:87.16:0,87,876	0/0:17,0:17:45.10:0,45,459	0/0:18,0:18:45.07:0,45,449	1/1:4,17:21:45.14:566,45,0	1/1:1,21:22:63.20:793,63,0	0/0:28,0:28:75.14:0,75,751	0/0:17,0:17:45.04:0,45,440	0/0:12,0:12:30.06:0,30,306	0/0:30,0:30:81.14:0,81,808	0/0:20,0:20:57.09:0,57,567	0/0:29,0:29:81.11:0,81,799	0/0:23,0:23:66.15:0,66,673	0/0:23,0:23:66.15:0,66,673	0/0:31,0:31:84.15:0,84,840	0/0:31,0:31:87.19:0,87,881	0/0:24,0:23:69.13:0,69,696	0/0:23,0:23:63.10:0,63,632
chr10	21337027	.	A	AGT	4443.14	PASS	AB=0.707;AC=29;AF=0.558;AN=52;BaseQRankSum=-4.004;DP=640;FS=2.579;HRun=0;HaplotypeScore=114.7557;InbreedingCoeff=-0.1433;MQ=70.75;MQ0=7;MQRankSum=0.033;QD=8.82;ReadPosRankSum=-1.091;VQSLOD=4.2657;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:29:2.99:24,3,0	0/0:10,0:10:15:0,15,144	./.	./.	0/0:34,0:35:20.41:0,20,505	0/1:12,17:29:10.12:247,0,10	0/1:14,8:22:34.25:79,0,34	0/1:27,0:27:15.08:136,0,15	1/1:7,19:27:36.12:538,36,0	1/1:26,0:26:14.99:127,15,0	1/1:15,0:15:3:25,3,0	0/1:27,5:32:99:304,0,150	0/1:9,8:16:36.86:162,0,37	0/1:12,12:25:17.10:330,0,17	0/0:19,0:19:35.89:0,36,377	0/1:9,11:24:93.09:367,0,93	1/1:19,0:19:6.46:51,6,0	0/1:12,12:24:42.03:246,0,42	1/1:21,0:21:5.99:51,6,0	1/1:21,0:21:9.47:84,9,0	1/1:12,0:11:2.82:25,3,0	0/1:16,17:36:27.07:454,0,27	0/0:7,7:14:0.23:0,0,0	0/1:11,15:27:40.81:411,0,41	0/1:10,10:20:45.67:286,0,46	0/1:14,8:24:3.24:265,0,3	0/1:13,11:24:61.60:231,0,62	0/0:7,0:7:5.78:0,6,60
chr10	21337030	.	G	GTGTGTGTGTGTGTA	3441.80	PASS	AB=0.861;AC=11;AF=0.196;AN=56;BaseQRankSum=-3.261;DP=686;FS=0.000;HRun=0;HaplotypeScore=249.9032;InbreedingCoeff=0.6097;MQ=66.33;MQ0=8;MQRankSum=-4.012;QD=19.34;ReadPosRankSum=-3.708;VQSLOD=1.7132;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:12,18:42:17.92:198,0,18	0/0:10,0:10:21.04:0,21,488	0/0:23,0:15:23.95:0,24,208	0/0:27,0:23:26.26:0,26,336	0/0:37,0:37:93.12:0,93,2292	0/0:30,0:30:35.20:0,35,454	0/0:20,0:20:29.98:0,30,490	0/0:30,0:30:7.26:0,7,483	0/0:28,0:27:43.33:0,43,674	1/1:32,0:32:47.30:1346,47,0	1/1:21,0:21:3.01:106,3,0	0/0:32,0:32:64.41:0,64,1195	0/0:19,0:18:32.62:0,33,494	0/0:25,0:24:41.83:0,42,647	0/0:22,0:22:51.09:0,51,1377	0/0:25,0:25:42.01:0,42,1116	1/1:19,0:19:9.03:341,9,0	0/0:25,0:25:41.61:0,42,719	1/1:28,0:28:20.23:1006,20,0	0/1:24,0:24:8.05:416,0,8	0/1:12,0:11:9.90:30,0,10	0/0:37,0:37:50.04:0,50,895	0/0:14,0:14:11.34:0,11,97	0/0:28,0:28:47.79:0,48,856	0/0:19,0:19:44.11:0,44,769	0/0:25,0:24:54.78:0,55,729	0/0:23,0:23:39.02:0,39,839	0/0:9,0:9:21.41:0,21,355
chr10	21337032	.	G	GTGTGTGTGTGTA	4389.89	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=-5.197;DP=698;FS=1.632;HRun=0;HaplotypeScore=231.1441;InbreedingCoeff=0.7915;MQ=64.92;MQ0=8;MQRankSum=-4.011;QD=22.75;ReadPosRankSum=-4.671;VQSLOD=3.2934;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:39,0:39:17.95:152,0,18	0/0:9,0:9:21.04:0,21,461	0/0:22,0:14:23.95:0,24,208	0/0:26,0:22:26.23:0,26,336	0/0:37,0:37:93.10:0,93,2095	0/0:30,0:30:35.67:0,36,427	0/0:22,0:22:32.97:0,33,466	0/0:30,0:30:12.15:0,12,510	0/0:28,0:27:43.33:0,43,579	1/1:4,27:37:55.76:1679,56,0	1/1:21,1:22:3.01:120,3,0	0/0:32,0:32:64.78:0,65,1091	0/0:19,0:18:32.83:0,33,451	0/0:23,0:22:41.47:0,41,586	0/0:22,0:22:57.09:0,57,1318	0/0:25,0:25:45.28:0,45,949	1/1:4,13:25:12.04:479,12,0	0/0:25,0:25:41.94:0,42,639	1/1:8,18:33:35.61:1390,36,0	1/1:2,21:24:4.21:519,4,0	1/1:13,0:12:5.91:52,6,0	0/0:37,0:37:56.04:0,56,838	0/0:13,0:13:11.60:0,12,97	0/0:28,0:28:47.63:0,48,735	0/0:20,0:20:44.11:0,44,690	0/0:25,0:24:57.78:0,58,697	0/0:23,0:23:39.02:0,39,721	0/0:9,0:9:21.83:0,22,329
chr10	21337034	.	G	GTGTGTGTGTA	3186.43	PASS	AB=0.991;AC=11;AF=0.196;AN=56;BaseQRankSum=-1.740;DP=693;FS=1.100;HRun=0;HaplotypeScore=214.4486;InbreedingCoeff=0.5920;MQ=62.66;MQ0=9;MQRankSum=-3.778;QD=16.77;ReadPosRankSum=-2.131;VQSLOD=2.5885;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:37,1:38:17.95:126,0,18	0/0:8,0:8:21.04:0,21,429	0/0:24,0:14:23.95:0,24,208	0/0:26,0:21:29.24:0,29,375	0/0:37,0:37:96.11:0,96,1924	0/0:30,0:30:35.19:0,35,384	0/0:21,0:21:38.96:0,39,463	0/0:30,0:30:15.86:0,16,513	0/0:28,0:27:43.32:0,43,465	0/1:36,0:36:18.89:1189,0,19	1/1:4,12:23:3.01:154,3,0	0/0:32,0:32:65.46:0,65,969	0/0:20,0:19:32.82:0,33,404	0/0:24,0:23:41.75:0,42,506	0/0:22,0:22:57.09:0,57,1199	0/0:26,0:26:47.49:0,47,783	1/1:23,0:23:12.04:355,12,0	0/0:23,0:23:41.98:0,42,544	1/1:31,1:32:25.55:1086,26,0	1/1:25,0:25:12.50:412,12,0	0/1:13,0:12:26.72:27,0,35	0/0:36,0:36:56.04:0,56,719	0/0:13,0:13:11.50:0,12,97	0/0:28,0:28:48.47:0,48,608	0/0:19,0:19:47.10:0,47,624	0/0:24,0:23:57.68:0,58,622	0/0:23,0:23:39.01:0,39,603	0/0:9,0:9:21.95:0,22,304
chr10	21339448	.	G	GA	2004.95	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-7.727;DP=631;FS=10.233;HRun=9;HaplotypeScore=60.7940;InbreedingCoeff=0.9940;MQ=81.78;MQ0=0;MQRankSum=-1.210;QD=23.59;ReadPosRankSum=0.574;VQSLOD=4.1075;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:71.93:0,72,619	1/1:2,6:8:20.09:205,20,0	0/0:22,0:22:41.42:0,41,385	0/0:21,0:19:40.52:0,41,339	1/1:5,25:30:72.15:781,72,0	0/0:24,0:24:65.96:0,66,568	0/0:21,0:21:53.99:0,54,469	0/0:27,0:27:56.93:0,57,489	0/0:24,0:24:71.99:0,72,625	0/0:19,0:19:47.97:0,48,417	0/0:25,0:25:47.94:0,48,417	0/0:21,0:21:53.91:0,54,454	0/0:22,0:22:53.94:0,54,462	0/0:24,1:25:38.81:0,39,566	1/1:4,26:30:69.10:747,69,0	1/1:1,16:17:39.11:431,39,0	0/0:33,2:35:59.78:0,60,744	0/0:18,0:18:47.99:0,48,417	0/0:16,0:18:34.47:0,34,265	0/0:23,0:23:56.97:0,57,492	0/0:15,0:15:38.97:0,39,334	0/0:19,0:19:47.96:0,48,415	0/0:21,0:21:59.99:0,60,521	0/0:30,0:29:80.96:0,81,698	0/0:23,0:22:68.99:0,69,599	0/0:28,0:28:65.97:0,66,573	0/0:27,0:27:71.94:0,72,617	0/0:7,0:7:14.99:0,15,130
chr10	21340188	.	AGC	A	4909.65	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=17.891;DP=475;FS=8.207;HRun=0;HaplotypeScore=142.0388;InbreedingCoeff=0.9756;MQ=93.65;MQ0=0;MQRankSum=-17.545;QD=26.40;ReadPosRankSum=4.617;VQSLOD=6.0898;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:63.22:0,63,1280	0/0:8,0:8:24.08:0,24,487	0/0:29,0:29:84.29:0,84,1669	0/0:32,0:32:78.27:0,78,1706	0/0:10,0:10:30.10:0,30,609	1/1:0,15:15:45.07:431,45,0	1/1:1,13:14:38.37:335,38,0	1/1:1,6:7:15.03:156,15,0	1/1:2,22:24:72.06:666,72,0	0/0:25,0:25:75.25:0,75,1478	0/0:6,0:6:18.06:0,18,366	1/1:1,9:10:30.03:284,30,0	1/1:0,14:14:41.96:377,42,0	1/1:0,21:21:62.92:568,63,0	0/0:30,0:30:90.30:0,90,1793	0/0:25,0:25:75.24:0,75,1486	0/0:26,0:26:78.27:0,78,1584	1/1:1,6:7:18.05:199,18,0	0/0:22,0:22:66.23:0,66,1334	0/0:9,0:9:27.09:0,27,548	0/0:46,0:46:99:0,138,2747	1/1:0,12:14:35.94:325,36,0	1/1:2,5:7:12.01:113,12,0	1/1:1,7:8:19.53:161,20,0	1/1:0,11:11:33.03:302,33,0	1/1:2,17:19:57.07:556,57,0	1/1:0,13:13:38.90:372,39,0	1/1:0,2:2:6.02:65,6,0
chr10	21340196	.	G	GAATTC	17703.36	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=18.176;DP=544;FS=11.756;HRun=0;HaplotypeScore=159.6043;InbreedingCoeff=0.9838;MQ=89.24;MQ0=0;MQRankSum=-18.797;QD=72.55;ReadPosRankSum=2.436;VQSLOD=6.2755;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:69.22:0,69,1530	0/0:8,0:8:24.08:0,24,541	0/0:25,0:25:69.20:0,69,1407	0/0:33,0:33:84.97:0,85,1898	0/0:10,0:10:30.10:0,30,699	1/1:2,15:17:51.18:1384,51,0	1/1:10,13:23:63.20:1593,63,0	1/1:6,6:12:33.11:940,33,0	1/1:2,22:24:69.24:1840,69,0	0/0:25,0:25:72.24:0,72,1629	0/0:7,0:7:21.06:0,21,445	1/1:4,9:13:39.13:1060,39,0	1/1:5,14:19:54.18:1388,54,0	1/1:5,21:26:78.27:2099,78,0	0/0:33,0:33:93.31:0,93,2104	0/0:26,0:26:78.27:0,78,1800	0/0:30,0:30:90.29:0,90,2026	1/1:5,6:11:21.07:594,21,0	0/0:23,0:23:69.24:0,69,1588	0/0:10,0:10:27.02:0,27,577	0/0:46,0:46:99:0,135,3111	1/1:7,12:19:51.18:1271,51,0	1/1:9,5:14:27.09:634,27,0	1/1:5,7:12:33.07:743,33,0	1/1:6,11:17:48.16:1247,48,0	1/1:2,17:19:57.20:1576,57,0	1/1:3,13:15:45.15:1162,45,0	1/1:0,2:2:6.02:171,6,0
chr10	21341059	.	CCACA	C	5277.29	PASS	AB=0.719;AC=33;AF=0.589;AN=56;BaseQRankSum=0.423;DP=642;FS=3.196;HRun=0;HaplotypeScore=120.5663;InbreedingCoeff=0.6709;MQ=63.74;MQ0=8;MQRankSum=0.950;QD=13.13;ReadPosRankSum=3.097;VQSLOD=4.4429;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:36:21.07:0,21,369	1/1:8,0:11:8.50:64,9,0	0/0:30,0:10:3.01:0,3,45	0/0:40,0:22:12.04:0,12,193	0/0:9,0:15:0:0,0,0	1/1:18,2:24:15.03:188,15,0	0/1:18,11:29:18.64:307,0,19	1/1:10,5:15:18.82:166,19,0	1/1:13,10:23:33.10:501,33,0	0/0:17,0:18:34.93:0,35,563	0/0:13,0:12:3.01:0,3,43	1/1:5,21:27:54.18:833,54,0	1/1:17,5:22:12.04:179,12,0	1/1:17,5:29:33.07:422,33,0	1/1:7,0:21:18.02:168,18,0	1/1:10,0:27:45.05:419,45,0	0/0:21,0:26:18.49:0,18,331	1/1:16,10:26:20.81:331,21,0	0/0:14,0:15:12.04:0,12,168	0/0:11,0:11:0.47:0,0,1	0/0:31,0:33:21.07:0,21,367	1/1:15,4:19:4.94:92,5,0	1/1:6,2:8:6.02:95,6,0	1/1:16,14:30:23.94:365,24,0	1/1:13,13:26:24.07:379,24,0	1/1:23,3:30:24.93:310,25,0	0/1:12,4:18:0.06:236,0,0	0/1:8,7:15:0.99:220,0,1
chr10	21342156	.	A	ATTTT	6135.81	PASS	AB=0.680;AC=47;AF=0.839;AN=56;BaseQRankSum=-6.523;DP=609;FS=0.000;HRun=14;HaplotypeScore=96.4785;InbreedingCoeff=0.3000;MQ=64.71;MQ0=4;MQRankSum=-0.897;QD=10.69;ReadPosRankSum=-0.941;VQSLOD=1.3336;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,1:28:26.80:305,27,0	1/1:7,0:7:15.05:215,15,0	0/1:24,0:11:6.03:10,0,6	0/0:19,0:14:19.63:0,20,154	1/1:10,0:32:45.40:576,45,0	1/1:2,0:19:10.20:109,10,0	1/1:8,0:21:11.74:94,12,0	0/1:12,0:27:0.71:230,0,1	1/1:2,0:10:11.87:110,12,0	1/1:12,10:26:35.92:433,36,0	1/1:7,4:30:69.10:958,69,0	0/1:5,0:20:13.81:71,0,14	1/1:5,0:22:14.58:100,15,0	1/1:11,0:22:11.81:91,12,0	1/1:7,0:23:10.14:124,10,0	1/1:9,0:23:14.96:185,15,0	1/1:6,14:21:3.01:58,3,0	0/1:8,0:17:7.25:76,0,7	1/1:14,2:18:25.13:418,25,0	1/1:11,3:25:40.29:554,40,0	1/1:6,1:7:13.86:191,14,0	1/1:5,0:25:38.94:258,39,0	0/1:11,0:32:35.37:189,0,35	0/0:4,0:16:6.56:0,7,18	1/1:8,0:26:18:166,18,0	1/1:7,1:25:40.64:366,41,0	1/1:8,1:29:20.28:198,20,0	1/1:1,0:6:6.93:50,7,0
chr10	21342716	.	T	TA	10854.07	PASS	AB=1.000;AC=46;AF=0.821;AN=56;BaseQRankSum=1.853;DP=536;FS=0.000;HRun=8;HaplotypeScore=66.1005;InbreedingCoeff=0.7488;MQ=73.20;MQ0=1;MQRankSum=-1.078;QD=23.19;ReadPosRankSum=2.358;VQSLOD=5.5073;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,7:11:10.68:164,11,0	0/0:5,0:5:14.98:0,15,128	0/1:22,0:14:28.42:37,0,28	0/1:16,0:9:8.92:9,0,73	0/0:25,0:25:75:0,75,673	1/1:5,24:29:57.16:650,57,0	1/1:3,12:15:33.09:377,33,0	1/1:10,22:32:70.43:728,70,0	1/1:2,17:19:42.01:462,42,0	1/1:3,26:30:81.15:882,81,0	1/1:2,21:23:55.47:665,55,0	1/1:1,14:15:32.99:377,33,0	1/1:6,14:20:39.11:440,39,0	1/1:4,14:18:30.56:343,31,0	0/0:24,0:24:65.98:0,66,588	0/0:14,0:14:42.01:0,42,381	1/1:3,33:36:84.25:971,84,0	1/1:1,7:8:21.06:241,21,0	1/1:4,14:18:42.09:458,42,0	1/1:0,28:28:81.12:904,81,0	1/1:3,4:9:14.78:133,15,0	1/1:4,12:16:39.11:438,39,0	1/1:2,8:10:23.93:254,24,0	1/1:2,9:11:21.06:239,21,0	1/1:1,22:24:57.03:633,57,0	1/1:0,19:19:57.13:626,57,0	1/1:4,29:32:60.17:686,60,0	1/1:1,5:6:12.03:137,12,0
chr10	21344110	.	G	GCACACATACAC	5316.99	PASS	AB=0.861;AC=22;AF=0.393;AN=56;BaseQRankSum=9.189;DP=682;FS=25.983;HRun=0;HaplotypeScore=272.9319;InbreedingCoeff=-0.3635;MQ=59.00;MQ0=11;MQRankSum=-10.218;QD=11.66;ReadPosRankSum=-5.178;VQSLOD=1.9009;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:20,0:33:99:99,0,176	1/1:10,0:13:6.70:177,7,0	0/0:28,0:15:30.10:0,30,581	0/0:34,0:14:21.05:0,21,465	0/1:17,0:17:71.14:119,0,71	0/1:19,0:23:91.43:91,0,188	0/1:35,0:34:73.19:73,0,455	0/1:29,0:29:99:357,0,742	0/1:13,0:18:99:420,0,174	0/0:13,0:22:25.16:0,25,585	0/0:14,0:20:37.30:0,37,564	0/1:24,0:32:99:704,0,435	0/1:22,0:25:99:124,0,383	0/1:16,0:20:99:392,0,160	1/1:5,0:25:15.05:520,15,0	0/1:11,1:29:13:632,0,13	0/0:20,0:34:33.77:0,34,703	0/1:14,0:17:99:319,0,314	0/0:14,0:19:40.58:0,41,560	0/0:11,0:23:34.66:0,35,574	0/0:20,0:46:71.14:0,71,931	0/1:15,0:17:68.81:69,0,248	0/1:15,0:18:71.43:71,0,351	0/1:22,0:28:99:172,0,679	0/1:25,0:25:24.09:24,0,271	0/1:15,0:17:99:118,0,300	0/1:18,0:23:99:744,0,219	0/1:7,0:7:92.02:92,0,174
chr10	21344556	.	CAA	C	13296.30	PASS	AB=0.748;AC=46;AF=0.821;AN=56;BaseQRankSum=1.126;DP=975;DS;FS=37.720;HRun=11;HaplotypeScore=181.6405;InbreedingCoeff=0.7935;MQ=79.91;MQ0=34;MQRankSum=-0.210;QD=20.30;ReadPosRankSum=5.308;VQSLOD=0.7564;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,41:46:99:1205,117,0	0/1:1,1:8:13.46:13,0,44	0/1:101,2:40:3.57:4,0,411	0/0:233,0:92:28.78:0,29,1211	0/0:8,1:29:15.05:0,15,117	1/1:3,27:30:66.16:702,66,0	1/1:5,17:22:33.73:494,34,0	1/1:8,26:34:69.09:727,69,0	1/1:1,16:17:48.12:511,48,0	1/1:8,18:26:54.09:568,54,0	1/1:1,22:23:60.14:639,60,0	1/1:4,21:26:54.12:575,54,0	1/1:3,20:23:51.11:543,51,0	1/1:4,22:26:54.11:575,54,0	0/0:4,0:21:23.98:0,24,215	0/0:6,1:30:16.79:0,17,160	1/1:2,28:30:69.15:734,69,0	1/1:5,28:34:68.92:790,69,0	1/1:5,27:32:73.78:816,74,0	1/1:2,19:21:54.11:575,54,0	1/1:7,11:19:32.97:386,33,0	1/1:0,24:25:60.08:694,60,0	1/1:2,25:27:69.17:734,69,0	1/1:5,14:19:42.09:447,42,0	1/1:0,16:16:48.12:511,48,0	1/1:5,14:19:42.06:437,42,0	1/1:4,16:21:44.78:459,45,0	1/1:0,5:5:15.04:160,15,0
chr10	21344952	.	G	GT	6174.92	PASS	AB=0.880;AC=31;AF=0.554;AN=56;BaseQRankSum=-11.810;DP=504;FS=0.000;HRun=10;HaplotypeScore=50.5323;InbreedingCoeff=0.8214;MQ=75.24;MQ0=0;MQRankSum=-0.040;QD=20.65;ReadPosRankSum=0.469;VQSLOD=5.5454;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:59.89:0,60,488	0/0:7,0:7:14.91:0,15,118	0/1:11,0:11:2.74:3,0,58	0/1:10,0:10:12.91:13,0,69	0/0:21,0:21:44.91:0,45,369	1/1:2,13:15:36.98:386,37,0	1/1:2,14:16:33.45:408,33,0	1/1:9,21:30:35.44:546,35,0	1/1:5,15:20:39.10:416,39,0	0/0:25,0:25:59.89:0,60,490	0/0:19,1:21:17.98:0,18,343	1/1:0,12:14:29.10:329,29,0	1/1:4,17:21:48.12:512,48,0	1/1:3,10:13:5.45:263,5,0	0/0:19,0:19:44.91:0,45,366	0/0:14,0:14:38.94:0,39,320	0/0:28,0:28:68.73:0,69,552	1/1:3,15:18:33.08:352,33,0	0/0:20,0:20:56.93:0,57,468	0/0:15,0:15:38.95:0,39,320	0/0:13,0:13:23.97:0,24,197	1/1:4,16:21:44.87:437,45,0	1/1:5,14:19:20.44:411,20,0	1/1:3,17:21:29.16:483,29,0	1/1:1,14:15:39.10:416,39,0	0/1:10,13:23:1.21:388,0,1	1/1:4,20:25:59.98:622,60,0	1/1:0,6:6:18.05:192,18,0
chr10	21345481	.	A	ACC	969.12	PASS	AB=0.955;AC=7;AF=0.125;AN=56;BaseQRankSum=-8.359;DP=652;FS=9.980;HRun=9;HaplotypeScore=192.2994;InbreedingCoeff=0.8104;MQ=67.38;MQ0=3;MQRankSum=3.404;QD=16.15;ReadPosRankSum=-2.581;VQSLOD=-0.2855;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,118,509	1/1:0,6:6:15.05:231,15,0	0/0:17,0:13:7.91:0,8,88	0/1:20,0:17:17.10:17,0,41	1/1:6,0:10:17.42:167,17,0	0/0:27,0:27:52.14:0,52,226	0/0:18,0:18:40.61:0,41,177	0/0:25,0:25:49.94:0,50,202	0/0:36,0:36:76.84:0,77,332	0/0:28,0:29:71.35:0,71,309	0/0:15,0:15:35.68:0,36,155	0/0:23,0:23:45.15:0,45,193	0/0:27,0:27:57.64:0,58,249	0/0:25,0:25:57.63:0,58,249	0/0:26,0:26:58.33:0,58,400	1/1:1,20:23:50.14:700,50,0	0/0:33,0:33:63.11:0,63,273	0/0:13,0:13:35.68:0,36,154	0/0:17,0:18:45.52:0,46,193	0/0:24,0:24:38.41:0,38,166	0/0:21,0:21:35.68:0,36,154	0/0:23,0:23:49.45:0,49,215	0/0:20,0:20:27.44:0,27,119	0/0:43,0:43:82.79:0,83,357	0/0:15,0:15:35.68:0,36,154	0/0:28,0:28:64.29:0,64,276	0/0:23,0:23:54.89:0,55,237	0/0:14,0:14:30.19:0,30,131
chr10	21345487	.	CCCCA	C	24874.28	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-9.365;DP=648;FS=5.764;HRun=0;HaplotypeScore=124.1895;InbreedingCoeff=0.9964;MQ=66.43;MQ0=3;MQRankSum=-5.491;QD=46.06;ReadPosRankSum=6.042;VQSLOD=5.2566;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,47:48:99:2441,129,0	0/0:6,0:6:15.05:0,15,322	0/0:19,0:13:32.67:0,33,553	0/0:19,0:15:35.25:0,35,546	0/0:10,0:10:27.06:0,27,448	1/1:0,25:25:63.21:1153,63,0	1/1:0,17:17:45.15:862,45,0	1/1:0,25:25:72.08:1153,72,0	1/1:0,34:34:87.30:1648,87,0	1/1:2,27:29:81.23:1455,81,0	1/1:0,17:17:42.04:732,42,0	1/1:0,22:22:54.18:998,54,0	1/1:0,29:29:66.23:1245,66,0	1/1:0,26:26:63.21:1208,63,0	0/0:31,0:31:63.22:0,63,1333	0/0:23,0:23:55.42:0,55,1090	1/1:0,29:29:69.20:1321,69,0	1/1:0,13:13:39.13:748,39,0	1/1:1,18:19:54.13:910,54,0	1/1:0,22:22:48.02:812,48,0	1/1:0,25:25:45.07:788,45,0	1/1:0,25:25:60.19:1076,60,0	1/1:0,17:17:39.04:674,39,0	1/1:0,41:41:87.34:1670,87,0	1/1:0,15:15:39.13:748,39,0	1/1:0,27:27:78.21:1377,78,0	1/1:0,22:22:63.22:1184,63,0	1/1:0,13:13:36.12:672,36,0
chr10	21345490	.	C	CA	458.40	PASS	AB=0.905;AC=4;AF=0.071;AN=56;BaseQRankSum=-7.097;DP=660;FS=1.700;HRun=9;HaplotypeScore=183.2293;InbreedingCoeff=0.4984;MQ=66.35;MQ0=3;MQRankSum=2.398;QD=6.28;ReadPosRankSum=-1.900;VQSLOD=-0.2625;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:91.02:0,91,286	0/0:8,0:8:12.06:0,12,46	0/1:16,2:12:6.79:7,0,54	0/1:18,0:16:3.49:3,0,60	0/0:12,0:12:8.69:0,9,55	0/0:25,0:25:45.55:0,46,153	0/0:17,0:17:33.30:0,33,105	0/0:25,0:25:49.30:0,49,172	0/0:34,0:34:64.96:0,65,209	0/0:29,0:29:51.62:0,52,165	0/0:17,0:17:27.26:0,27,91	0/0:22,0:22:38.13:0,38,124	0/0:29,0:29:49.42:0,49,160	0/0:26,0:26:46.62:0,47,146	1/1:4,30:35:51.40:551,51,0	0/0:27,0:27:12.60:0,13,116	0/0:29,0:29:50.65:0,51,161	0/0:13,0:13:28.86:0,29,90	0/0:19,0:19:35.75:0,36,117	0/0:22,0:22:29.47:0,29,98	0/0:25,0:25:28.85:0,29,90	0/0:25,0:25:41.07:0,41,139	0/0:17,0:17:28.11:0,28,102	0/0:41,0:41:62.64:0,63,198	0/0:15,0:15:28.86:0,29,90	0/0:27,0:27:54.39:0,54,176	0/0:22,0:22:47.24:0,47,154	0/0:13,0:13:27.22:0,27,89
chr10	21346693	.	C	CAA	5948.79	PASS	AB=0.955;AC=31;AF=0.554;AN=56;BaseQRankSum=-9.818;DP=582;FS=2.906;HRun=11;HaplotypeScore=103.3532;InbreedingCoeff=0.8942;MQ=77.98;MQ0=1;MQRankSum=2.379;QD=18.83;ReadPosRankSum=-2.463;VQSLOD=3.7291;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:36.87:0,37,432	0/0:0,0:5:13.72:0,14,59	0/1:20,0:21:22.58:23,0,57	0/0:14,0:14:10.93:0,11,64	0/0:3,0:33:65.69:0,66,283	1/1:7,20:28:51.09:692,51,0	1/1:4,18:22:42.10:585,42,0	1/1:11,19:32:61.92:716,62,0	1/1:4,11:17:24.04:324,24,0	0/0:23,0:24:32.48:0,32,347	0/0:20,0:23:15.44:0,15,367	1/1:0,13:13:24.08:348,24,0	1/1:6,6:12:5.85:87,6,0	1/1:4,16:21:18.06:258,18,0	0/0:20,0:21:53.73:0,54,506	0/0:4,0:24:52.12:0,52,225	0/0:19,0:19:44.99:0,45,436	1/1:3,6:9:12.01:153,12,0	0/0:23,0:23:47.69:0,48,430	0/0:34,0:34:46.75:0,47,521	0/0:19,0:19:38.92:0,39,366	1/1:2,12:18:39.87:350,40,0	1/1:4,18:23:29.03:342,29,0	1/1:0,11:13:23.57:313,24,0	1/1:3,19:25:33.86:390,34,0	1/1:6,20:28:68.52:785,69,0	1/1:8,17:24:27.08:368,27,0	1/1:0,8:8:15.05:217,15,0
chr10	21348736	.	TTCCATCCA	T	891	PASS	AB=1.000;AC=34;AF=0.810;AN=42;BaseQRankSum=0.230;DP=608;FS=3.463;HRun=0;HaplotypeScore=162.8577;InbreedingCoeff=0.2612;MQ=67.62;MQ0=7;MQRankSum=-1.501;QD=2.28;ReadPosRankSum=-1.784;VQSLOD=2.6760;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:29:2.01:8,0,2	1/1:1,5:6:9.03:221,9,0	./.	./.	1/1:13,7:20:5.95:56,6,0	1/1:35,0:35:2.68:11,3,0	1/1:23,0:23:2.97:20,3,0	./.	1/1:16,0:16:2.98:21,3,0	1/1:19,0:18:2.06:54,2,0	1/1:13,0:13:2.80:13,3,0	1/1:33,0:33:2.68:11,3,0	1/1:18,0:18:2.99:23,3,0	1/1:21,0:21:2.68:11,3,0	0/0:15,0:15:17.87:0,18,151	1/1:15,11:26:21.04:432,21,0	1/1:15,0:15:3.01:48,3,0	1/1:21,0:21:2.96:21,3,0	./.	1/1:32,0:31:2.74:12,3,0	0/0:18,0:17:1.25:0,1,3	./.	1/1:20,0:20:2.80:13,3,0	1/1:15,0:15:2.98:21,3,0	./.	0/1:29,0:28:0:0,0,0	./.	0/0:8,0:8:2.97:0,3,20
chr10	21348763	.	CATCCATCCATCCATCCATCCATCCATCCATCT	C	5667.37	PASS	AB=0.788;AC=42;AF=0.808;AN=52;BaseQRankSum=-0.026;DP=514;FS=2.134;HRun=0;HaplotypeScore=268.5014;InbreedingCoeff=0.4841;MQ=49.52;MQ0=23;MQRankSum=-0.665;QD=13.30;ReadPosRankSum=2.985;VQSLOD=3.0808;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,25:29:2.60:165,3,0	0/0:6,0:6:12.04:0,12,1055	./.	./.	0/0:23,0:23:48.10:0,48,1820	1/1:2,26:28:3.01:164,3,0	1/1:13,0:13:21.02:276,21,0	1/1:13,0:10:8.91:63,9,0	1/1:12,0:12:33:441,33,0	0/1:6,17:18:99:683,0,257	1/1:3,15:17:8.98:219,9,0	1/1:7,26:33:5.98:184,6,0	1/1:15,0:15:29.17:456,29,0	1/1:3,21:24:3.01:162,3,0	0/0:20,0:19:42.58:0,43,844	0/0:18,0:18:33.11:0,33,2303	1/1:1,20:21:3.01:239,3,0	1/1:18,0:18:7.37:368,7,0	1/1:12,0:10:12.04:158,12,0	1/1:4,30:32:20.78:309,21,0	1/1:13,0:9:14.64:196,15,0	1/1:4,17:21:3.01:56,3,0	1/1:5,25:30:3.01:163,3,0	1/1:12,0:12:9.03:262,9,0	1/1:11,0:9:8.94:182,9,0	1/1:4,20:23:35.07:350,35,0	1/1:14,0:14:36.06:466,36,0	0/1:7,0:6:99:108,0,110
chr10	21348791	.	CATCT	C	3097.46	PASS	AB=1.000;AC=41;AF=0.732;AN=56;BaseQRankSum=2.629;DP=483;FS=6.460;HRun=0;HaplotypeScore=97.6855;InbreedingCoeff=0.5267;MQ=54.93;MQ0=23;MQRankSum=-2.536;QD=8.60;ReadPosRankSum=1.295;VQSLOD=2.0330;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:26:0:0,0,0	0/1:6,0:6:11.97:22,0,12	0/0:13,0:11:19.31:0,19,260	0/0:11,0:7:7.29:0,7,130	0/0:24,0:24:34.85:0,35,389	1/1:27,0:27:2.86:16,3,0	1/1:7,0:7:14.99:129,15,0	1/1:24,0:19:56.95:505,57,0	1/1:16,0:16:47.23:311,47,0	1/1:23,0:18:6.53:197,7,0	1/1:15,0:15:5.89:37,6,0	0/0:27,0:27:0:0,0,0	1/1:8,0:8:20.91:166,21,0	0/0:21,0:21:1.25:0,1,3	1/1:22,0:21:15.38:249,15,0	0/1:21,0:21:5.96:6,0,237	1/1:20,0:20:3:26,3,0	1/1:13,0:13:35.75:266,36,0	1/1:9,4:10:20.90:165,21,0	1/1:31,0:30:11.71:73,12,0	1/1:7,0:4:6:52,6,0	1/1:19,0:18:5.92:41,6,0	0/1:25,0:25:0.06:0,0,0	1/1:11,0:11:24.17:189,24,0	1/1:12,0:11:32.90:270,33,0	1/1:25,0:24:38.30:279,38,0	1/1:10,0:10:29.50:185,29,0	1/1:5,0:4:8.91:63,9,0
chr10	21349388	.	AT	A	12233.46	PASS	AB=0.953;AC=47;AF=0.839;AN=56;BaseQRankSum=8.283;DP=601;FS=1.648;HRun=7;HaplotypeScore=115.6664;InbreedingCoeff=0.9269;MQ=76.01;MQ0=6;MQRankSum=-2.873;QD=23.08;ReadPosRankSum=0.594;VQSLOD=3.8162;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,24:26:69.16:703,69,0	0/0:8,0:8:21.07:0,21,264	0/0:19,0:8:17.04:0,17,158	0/1:39,0:26:0.22:0,0,241	0/0:24,0:24:69.21:0,69,853	1/1:2,21:22:48.10:489,48,0	1/1:0,26:26:75.17:765,75,0	1/1:3,27:30:81.13:806,81,0	1/1:3,13:16:14.75:363,15,0	1/1:2,20:22:57.11:576,57,0	1/1:2,16:18:45.09:459,45,0	1/1:2,15:17:42.09:428,42,0	1/1:3,18:21:51.11:515,51,0	1/1:4,23:26:59.96:607,60,0	1/1:1,20:21:54.10:551,54,0	0/0:19,0:19:54.16:0,54,665	1/1:4,22:25:54.10:545,54,0	1/1:2,20:22:57.13:581,57,0	1/1:4,18:22:57.09:571,57,0	1/1:2,16:18:39.07:397,39,0	1/1:3,11:12:27.06:275,27,0	1/1:4,13:17:42.09:427,42,0	1/1:2,17:19:51.11:520,51,0	1/1:1,17:18:42.57:429,43,0	1/1:3,22:24:60.13:612,60,0	1/1:2,18:20:54.12:551,54,0	1/1:4,27:31:78.16:789,78,0	1/1:1,9:10:27.06:275,27,0
chr10	21349395	.	TG	T	2414.62	PASS	AB=0.968;AC=41;AF=0.732;AN=56;BaseQRankSum=8.700;DP=612;FS=4.551;HRun=2;HaplotypeScore=146.4133;InbreedingCoeff=0.4629;MQ=73.46;MQ0=11;MQRankSum=-2.066;QD=5.03;ReadPosRankSum=6.304;VQSLOD=0.7892;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:28:29.90:160,0,30	0/0:8,0:8:24.07:0,24,327	0/0:28,0:10:23.16:0,23,272	0/0:54,0:26:12.69:0,13,324	0/0:24,0:24:72.16:0,72,961	0/1:23,1:23:22.46:61,0,22	1/1:27,0:27:29.25:141,29,0	1/1:27,0:27:32.09:73,32,0	0/1:17,1:18:47.54:94,0,48	1/1:21,0:21:2.22:69,2,0	1/1:17,1:18:15.24:121,15,0	1/1:15,0:15:28.60:95,29,0	1/1:19,2:21:32.71:167,33,0	1/1:26,1:26:16.22:162,16,0	1/1:21,1:22:13.45:71,13,0	0/0:17,0:17:51.17:0,51,733	1/1:23,2:24:25.05:186,25,0	1/1:22,0:22:24.73:116,25,0	1/1:20,1:21:6.98:82,7,0	0/1:18,0:18:16.37:56,0,16	0/1:13,1:12:22.41:22,0,27	1/1:14,1:15:24.14:160,24,0	1/1:18,0:18:37.70:136,38,0	1/1:17,0:17:29.88:91,30,0	1/1:24,1:24:20.87:126,21,0	1/1:19,0:19:6.03:79,6,0	1/1:27,1:28:59.77:254,60,0	1/1:10,0:10:4.47:80,4,0
chr10	21349407	.	TTCTCTCTC	T	1356.68	PASS	AB=0.892;AC=15;AF=0.326;AN=46;BaseQRankSum=3.214;DP=620;FS=9.542;HRun=0;HaplotypeScore=214.6427;InbreedingCoeff=0.3865;MQ=64.83;MQ0=29;MQRankSum=-4.627;QD=7.84;ReadPosRankSum=0.083;VQSLOD=0.9208;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:28:15.52:0,16,350	./.	./.	0/0:54,0:20:0:0,0,1	0/0:26,0:26:9.03:0,9,214	0/1:22,1:24:5.91:196,0,6	./.	0/0:30,0:28:1.25:0,1,3	1/1:11,3:16:18.06:405,18,0	0/0:19,0:19:9.50:0,10,165	1/1:15,0:14:3.01:73,3,0	1/1:14,1:15:2.75:73,3,0	0/1:18,2:21:31.56:190,0,32	1/1:23,2:23:6.01:148,6,0	0/0:26,0:25:18.04:0,18,330	0/0:21,0:21:12.04:0,12,288	0/0:25,0:26:26.58:0,27,712	./.	0/0:23,0:22:7.84:0,8,128	./.	0/0:17,0:15:3:0,3,25	1/1:14,2:16:6.02:148,6,0	0/0:20,0:20:5.98:0,6,63	0/0:15,0:15:3.01:0,3,43	1/1:18,1:19:6.01:128,6,0	0/0:20,0:20:5.23:0,5,51	0/1:18,2:20:20.43:139,0,20	0/0:11,0:10:3.01:0,3,33
chr10	21349870	.	TC	T	14273.72	PASS	AB=1.000;AC=51;AF=0.911;AN=56;BaseQRankSum=9.986;DP=687;FS=0.000;HRun=1;HaplotypeScore=161.7312;InbreedingCoeff=0.7778;MQ=93.03;MQ0=0;MQRankSum=-11.555;QD=22.77;ReadPosRankSum=7.306;VQSLOD=4.4715;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:40,0:40:76.72:478,77,0	1/1:17,0:17:44.87:220,45,0	0/0:29,0:28:84.18:0,84,1235	0/0:31,0:31:74.85:0,75,1200	1/1:24,0:24:21.13:278,21,0	1/1:2,23:25:66.16:776,66,0	1/1:0,21:21:57.17:683,57,0	1/1:3,32:35:96.26:1119,96,0	1/1:4,17:21:57.09:643,57,0	1/1:31,0:31:78.48:395,78,0	1/1:17,0:17:45.61:240,46,0	1/1:2,18:20:51.16:612,51,0	1/1:1,19:20:51.11:596,51,0	1/1:4,16:20:54.09:617,54,0	1/1:30,0:30:53.57:351,54,0	1/1:24,0:24:34.39:257,34,0	1/1:34,0:34:70.61:441,71,0	1/1:1,10:11:24.07:288,24,0	0/1:17,0:17:27.87:99,0,28	1/1:27,0:27:74.65:416,75,0	1/1:23,0:23:37.64:255,38,0	1/1:3,16:19:54.04:615,54,0	1/1:0,36:36:93.23:1099,93,0	1/1:0,25:25:69.21:827,69,0	1/1:0,26:26:72.13:831,72,0	1/1:3,23:26:69.21:825,69,0	1/1:1,29:30:87.21:1027,87,0	1/1:0,8:8:24.07:288,24,0
chr10	21349871	.	CG	C	20181.21	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=6.650;DP=680;FS=0.528;HRun=3;HaplotypeScore=139.0792;InbreedingCoeff=0.9979;MQ=93.79;MQ0=0;MQRankSum=-11.905;QD=32.60;ReadPosRankSum=5.187;VQSLOD=3.5617;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,39:40:99:1264,102,0	1/1:0,17:17:48.15:595,48,0	0/0:29,0:28:75.23:0,75,1038	0/0:32,0:32:77.41:0,77,1078	1/1:1,22:23:63.20:778,63,0	1/1:23,0:23:66.16:776,66,0	1/1:21,0:21:57.17:683,57,0	1/1:36,0:36:96.26:1119,96,0	1/1:21,0:21:57.08:642,57,0	1/1:1,30:31:90.26:1095,90,0	1/1:0,17:17:48.15:595,48,0	1/1:20,0:20:51.16:612,51,0	1/1:20,0:20:51.11:595,51,0	1/1:19,0:19:54.08:616,54,0	1/1:1,29:30:75.24:929,75,0	1/1:1,23:24:60.19:744,60,0	1/1:1,33:34:96.30:1190,96,0	1/1:11,0:11:24.07:288,24,0	1/1:2,14:16:39.12:484,39,0	1/1:0,27:27:78.24:960,78,0	1/1:1,21:22:57.18:706,57,0	1/1:18,0:18:54.04:615,54,0	1/1:36,0:36:93.23:1099,93,0	1/1:26,0:26:69.21:827,69,0	1/1:27,0:26:72.13:831,72,0	1/1:23,0:23:69.21:825,69,0	1/1:29,0:29:87.21:1027,87,0	1/1:8,0:8:24.07:288,24,0
chr10	21352137	.	GCCCC	G	12567.21	PASS	AB=0.593;AC=47;AF=0.839;AN=56;BaseQRankSum=2.197;DP=637;FS=1.180;HRun=11;HaplotypeScore=188.1484;InbreedingCoeff=0.3800;MQ=76.20;MQ0=0;MQRankSum=-8.337;QD=21.26;ReadPosRankSum=9.656;VQSLOD=0.3752;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:9,0:49:5.23:54,0,5	0/1:3,0:7:2.98:3,0,7	0/0:21,0:21:54.14:0,54,1042	0/0:22,0:24:55.67:0,56,857	0/1:6,0:21:15.59:16,0,30	1/1:2,14:16:39.12:610,39,0	1/1:5,23:28:54.10:842,54,0	1/1:6,9:15:27.03:398,27,0	1/1:3,17:20:42.12:657,42,0	0/1:5,0:18:12.37:18,0,12	1/1:2,0:13:9.96:25,10,0	1/1:3,27:30:69.22:1059,69,0	1/1:1,29:30:84.28:1310,84,0	1/1:4,22:26:60.17:938,60,0	1/1:3,1:26:5.23:85,5,0	1/1:4,0:27:3.16:39,3,0	1/1:4,0:31:28.64:74,29,0	1/1:3,20:23:57.18:892,57,0	0/1:7,0:19:5.57:18,0,6	1/1:4,0:18:10.83:27,11,0	1/1:3,0:28:23.66:60,24,0	1/1:3,14:17:39.12:608,39,0	1/1:1,13:14:30.10:469,30,0	1/1:3,35:38:99:1633,105,0	1/1:3,20:23:54.17:844,54,0	1/1:5,24:29:44.37:977,44,0	1/1:0,21:21:54.14:817,54,0	1/1:0,4:4:6.02:94,6,0
chr10	21354209	.	T	TG	43.98	PASS	AB=0.803;AC=2;AF=0.036;AN=56;BaseQRankSum=3.205;DP=610;FS=0.938;HRun=0;HaplotypeScore=121.1776;InbreedingCoeff=-0.0246;MQ=73.34;MQ0=0;MQRankSum=-0.482;QD=0.98;ReadPosRankSum=-1.582;VQSLOD=2.1721;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:8,15:23:19.62:117,0,20	0/0:13,0:13:39.13:0,39,538	0/0:21,0:20:22.06:0,22,350	0/0:14,0:10:20.92:0,21,193	0/0:25,0:25:75.11:0,75,924	0/0:23,0:23:69.11:0,69,873	0/0:25,0:25:72.14:0,72,934	0/0:24,0:24:71.95:0,72,849	0/0:15,0:15:45.12:0,45,600	0/1:21,0:22:10.22:10,0,140	0/0:26,0:26:64.62:0,65,324	0/0:22,0:22:66.16:0,66,861	0/0:19,0:19:54.10:0,54,688	0/0:24,0:24:71.92:0,72,907	0/0:22,0:22:66.03:0,66,765	0/0:18,0:18:54.11:0,54,706	0/0:29,0:29:51.67:0,52,286	0/0:20,0:20:59.61:0,60,725	0/0:20,0:20:25.66:0,26,147	0/0:22,0:22:23.26:0,23,163	0/0:29,0:29:57.93:0,58,280	0/0:19,0:19:56.60:0,57,672	0/0:12,0:12:35.98:0,36,408	0/0:16,0:16:48.03:0,48,565	0/0:34,0:34:99:0,99,1244	0/0:31,0:31:92.48:0,92,1118	0/0:34,0:33:98.98:0,99,1199	0/0:8,0:8:24.08:0,24,333
chr10	21354940	.	G	GT	3610.21	PASS	AB=0.628;AC=41;AF=0.759;AN=54;BaseQRankSum=-5.200;DP=318;FS=10.268;HRun=0;HaplotypeScore=53.8415;InbreedingCoeff=0.6362;MQ=87.09;MQ0=1;MQRankSum=-2.480;QD=14.80;ReadPosRankSum=0.971;VQSLOD=4.1709;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:24,1:25:53.52:413,54,0	0/0:7,0:7:3.69:0,4,54	0/0:22,0:19:21.71:0,22,216	0/0:15,0:13:8.13:0,8,186	0/0:7,0:7:13.69:0,14,87	1/1:11,1:12:29.92:247,30,0	0/1:7,6:13:11.91:12,0,26	1/1:11,0:11:29.98:263,30,0	1/1:9,0:9:20.85:189,21,0	1/1:7,0:7:12.48:110,12,0	1/1:5,0:5:15:135,15,0	1/1:9,0:9:17.92:142,18,0	1/1:14,0:14:38.91:322,39,0	0/1:4,5:9:11.23:39,0,11	1/1:16,0:16:38.84:332,39,0	0/0:21,0:21:29.26:0,29,231	1/1:14,0:14:23.69:182,24,0	1/1:9,0:9:7.81:53,8,0	1/1:0,2:2:6.01:59,6,0	1/1:9,0:9:23.88:185,24,0	0/1:3,12:15:0.82:1,0,17	1/1:9,0:9:17.93:152,18,0	./.	1/1:10,0:10:14.25:140,14,0	1/1:8,1:9:19.27:198,19,0	1/1:12,0:12:26.97:233,27,0	1/1:5,14:19:3.63:36,4,0	1/1:6,0:6:17.99:168,18,0
chr10	21355232	.	AAAAAC	A	15955.73	PASS	AB=0.697;AC=51;AF=0.911;AN=56;BaseQRankSum=-0.726;DP=560;FS=3.218;HRun=0;HaplotypeScore=112.9447;InbreedingCoeff=0.5949;MQ=61.88;MQ0=2;MQRankSum=-1.527;QD=32.50;ReadPosRankSum=4.951;VQSLOD=4.4303;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,25:34:63.21:1152,63,0	1/1:1,3:4:3.01:56,3,0	0/0:41,0:28:29.98:0,30,715	0/0:28,0:20:15.05:0,15,386	1/1:4,10:14:26.96:353,27,0	1/1:0,17:17:42.14:784,42,0	1/1:9,20:29:51.13:910,51,0	1/1:14,14:28:42.11:683,42,0	1/1:3,16:19:39.13:727,39,0	1/1:1,11:12:33.08:553,33,0	1/1:0,4:4:6.02:113,6,0	1/1:4,23:27:54.19:1013,54,0	1/1:6,22:28:63.22:1174,63,0	1/1:5,15:20:36.12:675,36,0	1/1:8,20:28:48.16:900,48,0	1/1:10,9:19:24.05:408,24,0	1/1:8,19:27:0.37:793,0,0	0/1:13,10:23:70.99:420,0,71	1/1:7,4:11:12.04:225,12,0	1/1:1,6:7:14.97:200,15,0	1/1:5,11:16:24.08:432,24,0	1/1:3,6:9:18.06:338,18,0	1/1:2,6:8:15.05:264,15,0	1/1:6,28:34:72.25:1351,72,0	1/1:5,17:22:36.08:667,36,0	1/1:4,13:17:42.12:751,42,0	1/1:8,17:25:39.13:732,39,0	1/1:4,5:8:15.05:281,15,0
chr10	21355447	.	C	CTGTGTGTGTGTG	4860.13	PASS	AB=0.938;AC=45;AF=0.865;AN=52;BaseQRankSum=1.052;DP=499;FS=0.000;HRun=0;HaplotypeScore=180.7663;InbreedingCoeff=0.2064;MQ=60.94;MQ0=12;MQRankSum=0.092;QD=11.88;ReadPosRankSum=-0.074;VQSLOD=3.5081;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:34,0:34:6.95:70,7,0	1/1:7,0:7:3.01:48,3,0	0/0:32,0:17:3.01:0,3,50	0/0:24,0:15:4.62:0,5,84	1/1:17,0:17:6.94:52,7,0	1/1:15,0:13:6.02:165,6,0	1/1:21,0:20:3.48:51,3,0	0/1:31,0:28:77.82:426,0,78	0/1:13,0:12:84.36:192,0,84	1/1:15,0:14:11.40:188,11,0	1/1:14,0:14:9:99,9,0	1/1:22,0:21:15.05:445,15,0	1/1:24,0:22:18.53:487,19,0	1/1:19,0:19:6.02:209,6,0	1/1:24,0:24:9.49:186,9,0	1/1:9,0:9:5.99:136,6,0	1/1:10,0:10:14.89:284,15,0	1/1:6,0:7:12.93:489,13,0	1/1:13,0:14:8.95:251,9,0	1/1:16,0:14:3.01:50,3,0	./.	1/1:16,0:14:3.95:48,4,0	1/1:17,0:16:3.48:72,3,0	0/1:17,5:21:0:0,0,0	1/1:10,0:9:3.48:38,3,0	1/1:19,0:19:18.06:465,18,0	1/1:13,0:12:20.92:409,21,0	./.
chr10	21356006	.	TTCTCTCTCTCTCTCTCTCTCTC	T	1141.45	PASS	AB=0.881;AC=12;AF=0.316;AN=38;BaseQRankSum=3.263;DP=538;FS=1.710;HRun=0;HaplotypeScore=278.5065;InbreedingCoeff=0.4754;MQ=59.09;MQ0=23;MQRankSum=-2.419;QD=8.10;ReadPosRankSum=-0.093;VQSLOD=2.0169;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:27:12.04:0,12,344	0/0:15,0:14:3.01:0,3,150	./.	./.	0/0:20,0:20:9.03:0,9,374	./.	0/0:17,0:17:2.97:0,3,207	1/1:33,0:30:3.91:22,4,0	0/1:11,2:14:0:0,0,0	0/0:20,0:22:21.07:0,21,701	./.	./.	1/1:15,2:18:3.01:171,3,0	./.	0/0:29,0:27:9.03:0,9,556	0/0:26,0:25:21.07:0,21,1086	0/0:24,0:23:40.69:0,41,1787	0/1:14,0:13:99:160,0,289	0/0:15,0:14:9.03:0,9,172	0/0:13,0:15:3.01:0,3,87	0/0:23,0:19:5.98:0,6,86	./.	0/0:16,2:17:0:0,0,0	./.	1/1:18,1:25:3.01:173,3,0	1/1:20,0:27:9.43:400,9,0	./.	1/1:6,1:7:6.02:339,6,0
chr10	21359282	.	C	CAGAG	3925.17	PASS	AB=0.903;AC=43;AF=0.827;AN=52;BaseQRankSum=-0.812;DP=619;FS=1.287;HRun=0;HaplotypeScore=137.8338;InbreedingCoeff=0.5244;MQ=64.71;MQ0=15;MQRankSum=0.031;QD=7.87;ReadPosRankSum=-2.201;VQSLOD=2.0005;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:22,6:29:3.01:71,3,0	0/0:3,0:4:3:0,3,28	./.	0/1:65,0:27:0:0,0,0	0/0:16,0:21:6.01:0,6,56	1/1:25,0:25:21.07:397,21,0	1/1:18,0:18:9.03:162,9,0	1/1:31,0:31:20.24:274,20,0	1/1:14,0:14:11.87:139,12,0	1/1:10,7:19:25.26:369,25,0	0/1:13,0:13:0:0,0,0	1/1:20,0:20:15.04:240,15,0	1/1:15,0:21:3.01:52,3,0	1/1:13,0:20:9.03:156,9,0	./.	0/0:15,0:27:21.02:0,21,196	1/1:10,10:20:21.07:470,21,0	1/1:21,0:20:14.84:215,15,0	1/1:16,0:16:6:72,6,0	1/1:17,6:25:8.70:152,9,0	1/1:6,0:6:3.01:66,3,0	1/1:20,0:20:12.03:217,12,0	1/1:18,0:18:3:25,3,0	0/1:10,7:16:0.01:0,0,0	1/1:18,0:18:9.02:109,9,0	1/1:23,0:22:34.87:518,35,0	1/1:23,0:29:9.03:150,9,0	1/1:8,0:7:4.57:71,5,0
chr10	21361694	.	TC	T	5616.29	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=8.977;DP=615;FS=5.195;HRun=10;HaplotypeScore=64.6664;InbreedingCoeff=0.9741;MQ=73.07;MQ0=1;MQRankSum=-1.464;QD=21.19;ReadPosRankSum=1.877;VQSLOD=6.0202;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,31:40:86.96:755,87,0	1/1:1,11:12:29.99:260,30,0	0/0:15,0:14:4.16:0,4,188	0/0:19,0:19:32.06:0,32,305	1/1:3,20:23:59.97:521,60,0	0/0:20,1:21:22.06:0,22,462	0/0:21,0:21:48.13:0,48,531	0/0:18,0:19:27.04:0,27,281	0/0:17,0:17:45.11:0,45,489	1/1:2,21:23:59.97:517,60,0	1/1:3,15:18:44.99:390,45,0	0/0:28,0:28:66.17:0,66,722	0/0:19,0:19:36.05:0,36,372	0/0:19,0:19:42.09:0,42,449	1/1:1,27:28:80.98:703,81,0	1/1:6,24:31:70.05:584,70,0	1/1:4,26:30:77.98:677,78,0	0/0:28,2:29:43.08:0,43,676	1/1:6,17:23:50.98:443,51,0	1/1:2,16:18:47.89:402,48,0	1/1:5,14:19:41.98:364,42,0	0/0:22,0:22:48.08:0,48,498	0/0:11,0:11:21.06:0,21,232	0/0:26,2:28:40.09:0,40,656	0/0:19,0:19:42.07:0,42,436	0/0:26,2:28:14.19:0,14,577	0/0:25,0:25:60.60:0,61,647	0/0:8,0:8:18.05:0,18,199
chr10	21362584	.	T	TACACACACACACAC	12302.07	PASS	AB=0.634;AC=48;AF=0.889;AN=54;BaseQRankSum=-5.394;DP=645;FS=0.000;HRun=0;HaplotypeScore=237.7775;InbreedingCoeff=0.3169;MQ=52.88;MQ0=5;MQRankSum=-2.549;QD=20.82;ReadPosRankSum=2.004;VQSLOD=3.5666;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:26:5.06:144,5,0	1/1:5,0:11:8.30:350,8,0	./.	0/0:13,0:7:5.05:0,5,96	1/1:18,0:29:2.54:60,3,0	1/1:18,3:22:19.16:746,19,0	1/1:17,0:17:19.70:333,20,0	1/1:24,0:22:33:696,33,0	1/1:12,0:26:6.42:246,6,0	1/1:19,0:17:21.07:452,21,0	1/1:14,0:14:3.01:70,3,0	1/1:20,11:37:8.44:213,8,0	1/1:11,13:27:18.95:715,19,0	1/1:14,14:32:11.99:533,12,0	0/1:16,0:44:9.88:10,0,178	1/1:15,0:38:12.04:463,12,0	1/1:21,0:21:42.14:1560,42,0	1/1:15,0:16:30.09:981,30,0	1/1:20,0:19:26.53:535,27,0	1/1:20,0:20:6.01:97,6,0	1/1:11,0:9:3.01:88,3,0	1/1:15,7:25:3.01:201,3,0	0/0:12,11:26:1.41:0,1,3	0/1:10,6:21:0.02:0,0,0	1/1:6,14:24:9.96:755,10,0	1/1:26,0:26:61.44:1597,61,0	1/1:18,6:27:27.02:1097,27,0	1/1:11,0:11:4.17:361,4,0
chr10	21363102	.	A	ATTTTT	9407.80	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=5.370;DP=578;FS=4.887;HRun=7;HaplotypeScore=154.2018;InbreedingCoeff=0.7445;MQ=66.06;MQ0=0;MQRankSum=-6.808;QD=17.07;ReadPosRankSum=-0.455;VQSLOD=1.0395;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:8,3:37:36.12:711,36,0	1/1:2,2:6:6.02:127,6,0	0/0:17,0:17:30.63:0,31,662	0/0:10,0:9:11.18:0,11,203	1/1:11,0:28:32.03:431,32,0	1/1:3,0:12:18.06:329,18,0	1/1:13,0:25:27.09:521,27,0	1/1:15,1:33:46.09:799,46,0	1/1:6,0:14:18.06:321,18,0	1/1:10,0:16:18.05:282,18,0	1/1:5,0:23:26.86:305,27,0	1/1:8,0:23:6.02:92,6,0	1/1:19,0:21:34.04:422,34,0	1/1:10,0:21:19.79:299,20,0	1/1:10,0:24:8.62:152,9,0	1/1:4,1:26:21.07:425,21,0	1/1:9,0:25:9.03:150,9,0	1/1:12,1:15:22.88:373,23,0	1/1:26,0:29:42:514,42,0	1/1:9,0:15:14.95:210,15,0	1/1:7,0:16:9:119,9,0	1/1:7,0:18:24.04:413,24,0	1/1:9,0:24:17.87:256,18,0	1/1:2,0:10:9.03:160,9,0	1/1:7,2:28:25.64:514,26,0	1/1:28,0:34:64.75:915,65,0	1/1:4,0:10:9.03:181,9,0	1/1:7,0:17:26.05:386,26,0
chr10	21363932	.	A	AGGTC	41119.45	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-10.038;DP=629;FS=11.861;HRun=0;HaplotypeScore=88.7553;InbreedingCoeff=0.9905;MQ=91.69;MQ0=0;MQRankSum=-12.263;QD=71.89;ReadPosRankSum=7.279;VQSLOD=6.4229;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,39:43:99:3227,114,0	1/1:0,7:8:24.08:647,24,0	0/0:22,0:22:66.20:0,66,1315	0/0:35,0:35:99:0,103,1859	1/1:1,26:29:54.18:1501,54,0	1/1:1,24:26:72.25:2055,72,0	1/1:2,15:19:48.16:1325,48,0	1/1:7,19:27:72.23:1994,72,0	1/1:1,12:15:36.12:1009,36,0	1/1:1,12:16:45.12:1111,45,0	1/1:0,12:14:33.11:955,33,0	1/1:3,12:16:39.13:1072,39,0	1/1:2,19:24:60.21:1698,60,0	1/1:0,14:14:42.14:1217,42,0	1/1:1,15:20:39.13:1129,39,0	1/1:3,25:28:75.26:2135,75,0	1/1:1,22:25:66.23:1912,66,0	1/1:1,13:17:39.13:1129,39,0	1/1:7,16:24:72.23:1958,72,0	1/1:1,21:26:63.17:1706,63,0	1/1:1,17:19:38.73:1098,39,0	1/1:1,23:25:63.22:1823,63,0	1/1:3,22:27:59.71:1735,60,0	1/1:1,27:29:78.27:2260,78,0	1/1:3,14:18:48.16:1359,48,0	1/1:0,31:33:99:2816,99,0	1/1:2,19:24:63.22:1823,63,0	1/1:0,5:5:15.05:427,15,0
chr10	21364274	.	AT	A	20183.52	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=4.446;DP=789;FS=10.707;HRun=7;HaplotypeScore=139.4150;InbreedingCoeff=0.9989;MQ=83.32;MQ0=0;MQRankSum=-10.114;QD=27.16;ReadPosRankSum=5.696;VQSLOD=3.1699;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,40:41:99:1040,102,0	1/1:2,9:11:23.91:245,24,0	0/0:27,0:27:66.21:0,66,818	0/0:19,0:18:42.08:0,42,485	1/1:2,31:33:87.19:887,87,0	1/1:2,20:22:60.14:612,60,0	1/1:1,25:26:72.16:735,72,0	1/1:7,31:38:93.20:949,93,0	1/1:4,22:26:66.15:673,66,0	1/1:4,30:34:93:904,93,0	1/1:2,24:26:66.10:662,66,0	1/1:0,37:37:99:1041,102,0	1/1:1,24:25:69.16:704,69,0	1/1:0,27:27:78.18:796,78,0	1/1:0,36:36:99:1010,99,0	1/1:3,33:36:90.20:918,90,0	1/1:0,23:23:66.15:673,66,0	1/1:0,26:26:72.16:735,72,0	1/1:3,14:17:42.08:423,42,0	1/1:4,24:28:66.15:673,66,0	1/1:2,23:25:66.15:673,66,0	1/1:3,32:35:93.21:949,93,0	1/1:1,25:26:72.16:734,72,0	1/1:2,29:31:81.18:826,81,0	1/1:0,26:26:78.18:796,78,0	1/1:1,43:44:99:1301,129,0	1/1:3,26:29:75.17:765,75,0	1/1:0,15:15:45.10:459,45,0
chr10	21364806	.	A	AC	2062.12	PASS	AB=0.664;AC=40;AF=0.769;AN=52;BaseQRankSum=-2.002;DP=170;FS=15.114;HRun=1;HaplotypeScore=34.7982;InbreedingCoeff=0.5337;MQ=76.07;MQ0=0;MQRankSum=-3.641;QD=15.50;ReadPosRankSum=0.832;VQSLOD=1.7285;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,0:6:2.92:17,3,0	0/0:3,0:4:9.33:0,9,63	0/0:6,0:5:7.24:0,7,54	0/0:10,0:9:4.66:0,5,79	0/0:4,0:4:3.31:0,3,10	0/1:3,8:11:26.82:41,0,27	1/1:7,0:7:17.35:133,17,0	1/1:6,1:7:14.98:139,15,0	1/1:7,1:7:14.87:120,15,0	1/1:6,5:11:20.47:201,20,0	1/1:2,3:5:6.01:65,6,0	1/1:8,0:8:14.97:153,15,0	./.	1/1:7,0:7:17.86:177,18,0	1/1:9,1:10:7.70:93,8,0	0/0:11,0:11:11.13:0,11,61	1/1:6,0:4:9.03:114,9,0	1/1:4,0:4:3.01:31,3,0	1/1:4,0:4:11.96:109,12,0	1/1:4,1:5:11.53:98,12,0	0/1:2,1:3:0.69:31,0,1	1/1:4,0:3:9.02:103,9,0	1/1:5,0:5:14.95:147,15,0	1/1:1,0:1:3.01:35,3,0	1/1:3,0:3:8.71:49,9,0	1/1:8,0:8:14.93:140,15,0	1/1:9,0:9:21.01:216,21,0	./.
chr10	21365416	.	G	GA	2381.38	PASS	AB=1.000;AC=35;AF=0.833;AN=42;BaseQRankSum=-1.086;DP=313;FS=17.228;HRun=1;HaplotypeScore=44.0463;InbreedingCoeff=0.4510;MQ=44.73;MQ0=37;MQRankSum=-2.980;QD=12.21;ReadPosRankSum=1.830;VQSLOD=0.4794;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	1/1:4,0:2:1.72:4,2,0	0/1:53,0:6:1.63:2,0,49	0/0:60,0:10:13.92:0,14,86	1/1:9,0:6:2.42:6,2,0	1/1:0,5:1:3.01:39,3,0	./.	./.	./.	1/1:2,15:14:39.02:429,39,0	1/1:1,10:11:24.07:300,24,0	./.	1/1:0,8:3:9.03:112,9,0	./.	1/1:0,2:1:3.01:38,3,0	0/0:9,0:3:1.33:0,1,6	1/1:0,9:4:12.04:155,12,0	1/1:3,4:4:12.04:153,12,0	./.	1/1:3,8:10:24.02:272,24,0	1/1:3,3:6:0.92:68,1,0	1/1:1,10:9:21.07:266,21,0	1/1:1,3:3:6.02:76,6,0	1/1:1,6:4:9.03:114,9,0	1/1:1,8:8:12.04:151,12,0	1/1:2,10:5:15.05:192,15,0	1/1:2,7:6:9.02:113,9,0	0/0:21,0:6:0:0,0,0
chr10	21368940	.	G	GGTGTGTGTGTGTGTGTGTGTGT	19572.02	PASS	AB=0.607;AC=48;AF=0.857;AN=56;BaseQRankSum=-2.731;DP=665;FS=7.411;HRun=0;HaplotypeScore=328.3533;InbreedingCoeff=0.5530;MQ=59.58;MQ0=2;MQRankSum=-4.295;QD=34.89;ReadPosRankSum=0.740;VQSLOD=2.4741;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:37,0:37:12.70:323,13,0	0/0:7,0:13:14.96:0,15,149	0/0:40,0:30:48.10:0,48,1181	0/0:50,0:38:27.44:0,27,1360	0/1:10,0:25:55.48:149,0,55	1/1:10,0:23:12.04:987,12,0	1/1:34,0:34:19.80:930,20,0	1/1:32,0:30:57.12:1878,57,0	1/1:25,0:25:6.06:380,6,0	1/1:25,0:24:42.08:1613,42,0	1/1:16,0:16:6.02:269,6,0	1/1:11,16:32:27.98:2058,28,0	1/1:7,0:19:9.03:859,9,0	1/1:18,8:27:12:795,12,0	1/1:36,0:36:8.13:284,8,0	0/1:6,0:20:92.24:92,0,153	1/1:11,0:11:18.06:758,18,0	1/1:11,0:10:15.02:742,15,0	1/1:24,0:24:48:1379,48,0	1/1:12,0:12:0.47:1,0,0	1/1:19,0:19:8.85:159,9,0	1/1:14,8:24:15.05:1222,15,0	1/1:9,0:19:9.03:663,9,0	1/1:20,0:20:1.04:1,1,0	1/1:10,0:22:12.93:825,13,0	1/1:15,6:22:30.97:1608,31,0	1/1:18,0:17:36.08:1169,36,0	1/1:7,0:7:9.03:425,9,0
chr10	21368963	.	GCA	G	528.23	PASS	AB=0.929;AC=14;AF=0.250;AN=56;BaseQRankSum=1.211;DP=523;FS=5.395;HRun=0;HaplotypeScore=176.0166;InbreedingCoeff=-0.1701;MQ=59.01;MQ0=2;MQRankSum=-4.435;QD=2.06;ReadPosRankSum=-0.349;VQSLOD=2.3115;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:17,11:28:21.98:22,0,214	0/0:8,0:8:15.05:0,15,249	0/0:38,0:34:95:0,95,1781	0/0:58,0:43:99:0,115,2097	0/0:19,0:19:30.57:0,31,526	0/0:14,0:14:15.52:0,16,272	0/1:36,1:37:11.51:12,0,652	0/1:25,3:26:99:134,0,930	0/0:5,13:18:2.04:0,2,6	0/1:20,0:19:40.29:40,0,584	0/0:10,0:10:6.49:0,6,122	0/0:16,2:18:17.09:0,17,287	0/1:15,1:16:15.92:16,0,182	0/0:14,0:14:9.03:0,9,171	1/1:30,0:31:9.02:119,9,0	0/0:18,1:19:36.58:0,37,626	0/1:12,0:12:31.09:31,0,167	0/1:5,5:9:25.05:25,0,227	0/1:20,0:20:84.90:85,0,586	0/0:9,1:10:3.01:0,3,61	0/1:12,0:12:26.84:27,0,171	0/0:13,0:12:1.84:0,2,59	0/0:7,0:7:3.01:0,3,61	0/1:19,0:19:0.15:0,0,0	0/0:12,0:12:3.08:0,3,61	0/0:8,0:8:21.07:0,21,412	0/1:16,1:16:99:131,0,207	0/1:6,0:6:33.96:34,0,99
chr10	21368989	.	GAT	G	4842.66	PASS	AB=1.000;AC=50;AF=0.893;AN=56;BaseQRankSum=0.435;DP=446;FS=25.628;HRun=0;HaplotypeScore=139.9543;InbreedingCoeff=-0.1166;MQ=63.75;MQ0=9;MQRankSum=1.123;QD=10.86;ReadPosRankSum=0.544;VQSLOD=2.8796;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:21:11.63:199,12,0	1/1:10,0:10:23.61:152,24,0	1/1:37,0:20:7.93:343,8,0	0/1:51,0:24:1.99:362,0,2	1/1:16,0:16:24.50:164,25,0	1/1:17,0:17:2.84:147,3,0	1/1:27,0:27:48.06:376,48,0	1/1:0,16:16:47.63:371,48,0	1/1:6,0:6:16.02:101,16,0	1/1:15,0:15:8.72:236,9,0	1/1:7,0:7:15.27:104,15,0	1/1:14,0:14:17.63:106,18,0	1/1:16,0:14:31.19:187,31,0	1/1:15,0:15:21.70:137,22,0	1/1:23,0:23:17.95:142,18,0	1/1:12,2:14:38.61:316,39,0	1/1:12,1:13:38.60:304,39,0	0/1:7,0:7:5.42:53,0,5	0/1:13,0:12:4.62:105,0,5	1/1:9,0:9:17.83:130,18,0	1/1:9,0:8:17.03:117,17,0	1/1:15,0:14:22.70:127,23,0	1/1:10,0:9:17.64:111,18,0	1/1:18,0:18:5.83:34,6,0	1/1:14,0:13:21.95:129,22,0	0/1:10,0:10:6.77:114,0,7	0/1:13,0:13:8.02:141,0,8	0/1:10,0:8:33.81:34,0,45
chr10	21373073	.	GA	G	13914.84	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-1.066;DP=683;FS=17.929;HRun=10;HaplotypeScore=74.9941;InbreedingCoeff=0.9311;MQ=74.22;MQ0=0;MQRankSum=-4.546;QD=21.28;ReadPosRankSum=4.280;VQSLOD=4.0030;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,26:30:17.63:610,18,0	1/1:0,11:11:29.99:260,30,0	0/0:16,0:17:29.82:0,30,277	0/0:12,0:12:23.39:0,23,227	1/1:2,26:28:71.98:625,72,0	1/1:2,29:31:80.97:703,81,0	1/1:3,21:24:53.99:469,54,0	1/1:5,30:35:59.79:748,60,0	1/1:3,18:21:47.97:417,48,0	1/1:5,21:26:32.42:534,32,0	1/1:1,26:27:38.78:566,39,0	1/1:4,23:27:59.98:521,60,0	1/1:3,15:18:11.89:331,12,0	1/1:2,27:29:59.98:521,60,0	1/1:3,25:28:74.97:651,75,0	1/1:3,28:31:80.98:703,81,0	1/1:3,27:30:74.96:651,75,0	1/1:1,12:13:32.99:286,33,0	1/1:5,15:20:44.95:386,45,0	1/1:5,34:39:98.96:859,99,0	1/1:2,10:12:6.44:211,6,0	1/1:0,26:26:68.98:599,69,0	1/1:4,15:19:41.85:364,42,0	1/1:2,20:22:59.98:521,60,0	1/1:5,24:29:62.98:547,63,0	1/1:2,23:27:73.03:606,73,0	1/1:1,38:39:99:938,108,0	1/1:1,11:12:32.99:286,33,0
chr10	21373446	.	CTTTTT	C	7939.11	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=3.131;DP=550;FS=16.408;HRun=20;HaplotypeScore=115.4878;InbreedingCoeff=0.6818;MQ=64.90;MQ0=3;MQRankSum=-2.084;QD=16.27;ReadPosRankSum=7.063;VQSLOD=-0.6222;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,1:19:25.34:251,25,0	1/1:0,8:10:26.92:329,27,0	0/0:39,0:13:17.04:0,17,260	0/0:23,0:11:12.01:0,12,179	1/1:13,14:30:34.76:463,35,0	1/1:9,7:16:13.83:185,14,0	1/1:7,12:19:26.04:411,26,0	1/1:15,14:30:20.04:497,20,0	1/1:10,11:21:24.32:371,24,0	1/1:9,0:28:46.39:439,46,0	1/1:7,0:15:17.20:166,17,0	1/1:6,11:17:26.59:375,27,0	1/1:9,9:19:26.03:362,26,0	1/1:12,8:20:19.84:291,20,0	1/1:3,0:17:35.86:347,36,0	1/1:6,14:21:35.15:468,35,0	1/1:8,1:16:6.39:85,6,0	1/1:5,8:15:23.10:301,23,0	1/1:8,0:18:29.23:283,29,0	1/1:11,1:26:24.48:269,24,0	1/1:6,0:6:2.64:25,3,0	1/1:7,13:21:22.44:357,22,0	1/1:5,10:16:16.72:217,17,0	1/1:2,16:19:35.77:500,36,0	1/1:7,13:21:1.21:292,1,0	1/1:13,11:25:31.51:444,32,0	1/1:8,8:16:7.79:161,8,0	1/1:5,1:7:5.27:51,5,0
chr10	21375341	.	G	GTT	12878.07	PASS	AB=0.561;AC=45;AF=0.804;AN=56;BaseQRankSum=-4.633;DP=637;FS=3.065;HRun=11;HaplotypeScore=81.6800;InbreedingCoeff=0.8173;MQ=75.25;MQ0=0;MQRankSum=-2.894;QD=24.03;ReadPosRankSum=1.214;VQSLOD=4.9023;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,29:36:71.20:922,71,0	0/0:10,0:10:26.94:0,27,248	0/0:26,0:21:13.23:0,13,133	0/0:17,0:16:0.48:0,0,117	0/0:25,0:25:51.91:0,52,495	1/1:3,29:34:65.58:906,66,0	1/1:4,19:26:46.47:598,46,0	1/1:6,21:28:64.30:752,64,0	1/1:5,10:17:47.60:576,48,0	1/1:5,11:18:38.06:457,38,0	1/1:3,15:20:48.35:548,48,0	1/1:3,24:33:37.82:835,38,0	1/1:4,9:15:14.52:154,15,0	1/1:3,13:20:33.71:416,34,0	0/1:5,2:23:16.90:145,0,17	0/0:18,0:21:36.96:0,37,382	1/1:3,21:27:49.62:619,50,0	1/1:5,23:30:40.31:537,40,0	1/1:8,13:24:26.41:492,26,0	1/1:12,10:24:56.23:663,56,0	1/1:4,10:16:27.09:376,27,0	1/1:3,13:18:32.42:334,32,0	1/1:9,12:22:52.02:770,52,0	1/1:1,16:21:47.63:616,48,0	1/1:0,14:15:29.59:400,30,0	1/1:5,21:29:65.59:767,66,0	1/1:4,12:21:16.99:465,17,0	1/1:9,8:19:47.94:531,48,0
chr10	21376089	.	G	GTT	5519.05	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=4.180;DP=650;FS=0.700;HRun=10;HaplotypeScore=96.6728;InbreedingCoeff=0.9248;MQ=76.43;MQ0=2;MQRankSum=-0.471;QD=20.29;ReadPosRankSum=-1.675;VQSLOD=3.8545;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:23:59.24:544,59,0	1/1:0,9:9:27.09:402,27,0	0/1:27,0:15:7.55:8,0,107	0/0:31,0:27:10.29:0,10,280	1/1:4,28:34:77.64:1040,78,0	0/0:28,0:28:65.80:0,66,715	0/0:3,0:16:30.17:0,30,131	0/0:25,0:27:53.27:0,53,556	0/0:20,0:21:59.85:0,60,585	1/1:9,1:20:27.05:295,27,0	1/1:4,0:25:56.98:546,57,0	0/0:25,0:26:65.84:0,66,652	0/0:21,0:22:62.86:0,63,622	0/0:11,0:12:28.25:0,28,270	1/1:3,1:23:12.89:121,13,0	1/1:4,13:17:36.12:530,36,0	1/1:3,4:31:78.12:813,78,0	0/0:22,0:22:62.87:0,63,622	1/1:6,2:22:51.03:517,51,0	1/1:6,2:24:51.10:552,51,0	1/1:4,0:15:17.51:151,18,0	0/0:22,0:22:57.10:0,57,579	0/0:28,0:29:74.86:0,75,734	0/0:17,0:16:45.09:0,45,458	0/0:21,0:21:46.42:0,46,485	0/0:33,1:34:45.03:0,45,804	0/0:33,0:33:81.15:0,81,823	0/0:13,0:15:20.75:0,21,266
chr10	21378527	.	C	CTCTA	1552.63	PASS	AB=0.849;AC=13;AF=0.250;AN=52;BaseQRankSum=-2.345;DP=826;FS=5.840;HRun=0;HaplotypeScore=152.9864;InbreedingCoeff=0.6439;MQ=75.46;MQ0=10;MQRankSum=1.368;QD=5.84;ReadPosRankSum=-1.012;VQSLOD=2.0736;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:33:0,33,472	1/1:14,0:14:12.07:133,12,0	./.	0/1:70,0:39:0:0,0,0	0/0:27,0:27:36.09:0,36,500	1/1:16,12:28:12.04:277,12,0	0/0:23,0:22:3.01:0,3,45	./.	1/1:24,0:24:9.01:93,9,0	0/0:32,0:33:33.09:0,33,447	0/0:22,0:23:20.88:0,21,277	0/0:20,0:21:37.67:0,38,526	1/1:30,2:34:27.41:413,27,0	0/0:25,0:25:24.05:0,24,321	0/0:18,0:33:9.01:0,9,84	0/0:26,0:26:21.07:0,21,316	0/0:11,0:23:30.52:0,31,284	1/1:29,0:29:8.27:68,8,0	0/0:16,0:18:3:0,3,28	0/0:33,0:33:36.10:0,36,518	0/0:13,0:24:22.58:0,23,200	0/0:28,0:28:36.11:0,36,519	0/0:29,0:30:27.07:0,27,367	0/0:18,0:18:12.04:0,12,181	0/1:23,15:38:24.08:394,0,24	0/1:23,6:29:24.15:338,0,24	0/0:33,0:33:33.08:0,33,452	0/0:12,0:12:21.07:0,21,316
chr10	21381121	.	TA	T	12724.68	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=2.035;DP=615;FS=12.121;HRun=9;HaplotypeScore=175.3149;InbreedingCoeff=0.9816;MQ=61.83;MQ0=2;MQRankSum=-5.076;QD=22.17;ReadPosRankSum=5.008;VQSLOD=3.2542;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,23:27:65.78:575,66,0	1/1:4,9:13:29.89:256,30,0	0/0:23,0:18:32.80:0,33,321	0/0:17,0:10:18:0,18,181	1/1:1,26:27:63.78:560,64,0	1/1:3,15:18:44.85:384,45,0	1/1:6,11:17:35.87:305,36,0	1/1:5,19:24:54.02:494,54,0	1/1:5,19:24:59.99:541,60,0	1/1:3,22:25:71.99:651,72,0	1/1:7,18:25:60.01:543,60,0	1/1:3,22:25:65.90:579,66,0	1/1:4,19:23:62.96:566,63,0	1/1:3,16:19:47.83:406,48,0	1/1:5,27:32:86.78:749,87,0	1/1:4,21:25:71.96:643,72,0	1/1:2,19:21:57:514,57,0	1/1:1,20:20:50.98:458,51,0	1/1:9,15:24:50.05:445,50,0	1/1:3,19:22:59.99:541,60,0	1/1:2,8:10:17.89:144,18,0	1/1:4,17:21:50.90:448,51,0	1/1:2,17:19:53.85:461,54,0	1/1:3,14:16:15.46:296,15,0	1/1:7,28:35:95.24:832,95,0	1/1:4,22:26:69.01:627,69,0	1/1:4,19:23:57.03:521,57,0	1/1:2,8:10:20.97:185,21,0
chr10	21382393	.	C	CT	4549.66	PASS	AB=0.772;AC=20;AF=0.357;AN=56;BaseQRankSum=-10.961;DP=636;FS=3.552;HRun=10;HaplotypeScore=67.7750;InbreedingCoeff=0.8818;MQ=69.25;MQ0=0;MQRankSum=0.258;QD=20.31;ReadPosRankSum=3.053;VQSLOD=5.9872;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,102,832	0/0:7,0:7:20.98:0,21,172	0/1:16,0:15:8.08:8,0,85	0/0:18,0:15:9.97:0,10,200	0/0:27,0:27:74.90:0,75,616	1/1:3,23:27:72.01:750,72,0	0/0:22,0:22:19.24:0,19,362	0/0:36,0:36:76.54:0,77,655	1/1:1,25:26:63.16:672,63,0	0/0:26,0:26:62.90:0,63,517	0/0:19,0:19:53.91:0,54,440	1/1:2,14:16:33.03:339,33,0	1/1:2,16:18:27.07:288,27,0	1/1:2,13:16:26.49:248,26,0	0/0:34,0:34:80.86:0,81,665	0/0:26,0:26:67.65:0,68,540	0/0:23,1:23:45.69:0,46,518	1/1:6,21:27:37.55:586,38,0	0/0:18,0:19:49.93:0,50,392	0/0:18,0:18:41.92:0,42,342	0/0:27,0:27:68.89:0,69,566	1/1:0,13:14:35.92:364,36,0	1/1:5,15:21:17.29:374,17,0	1/1:3,24:27:69.11:721,69,0	0/1:5,10:15:0.59:200,0,1	0/0:28,1:30:44.94:0,45,565	0/0:25,0:26:73.95:0,74,597	0/0:13,0:14:40.96:0,41,322
chr10	21384324	.	C	CCTAT	3697.51	PASS	AB=0.758;AC=21;AF=0.420;AN=50;BaseQRankSum=-5.253;DP=632;FS=1.933;HRun=0;HaplotypeScore=118.6725;InbreedingCoeff=0.4795;MQ=59.15;MQ0=21;MQRankSum=0.997;QD=13.40;ReadPosRankSum=0.365;VQSLOD=3.5075;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:39:60.17:0,60,878	1/1:4,2:7:3.01:71,3,0	./.	./.	1/1:11,7:19:18.06:370,18,0	1/1:9,15:25:27.09:632,27,0	0/0:18,0:27:2.89:0,3,28	./.	1/1:13,13:27:15.05:317,15,0	0/0:25,0:26:27.08:0,27,370	0/1:5,9:14:9.84:194,0,10	0/1:12,13:25:34.17:198,0,34	1/1:9,16:26:18.06:421,18,0	0/1:22,5:26:4.22:691,0,4	0/1:9,7:17:31.17:266,0,31	0/0:19,0:19:18.05:0,18,254	0/0:23,0:23:33.11:0,33,506	0/1:16,0:16:13.30:13,0,256	0/0:19,0:17:9.03:0,9,138	0/0:17,0:18:24.54:0,25,345	0/0:34,0:33:63.19:0,63,919	1/1:23,2:25:27.08:443,27,0	1/1:11,3:18:2.80:70,3,0	1/1:21,0:30:4.01:12,4,0	0/0:15,0:15:24.06:0,24,347	0/0:10,0:22:29.07:0,29,276	0/0:9,0:16:6.01:0,6,57	0/0:9,0:11:12.02:0,12,113
chr10	21384447	.	TACACAC	T	1673.33	PASS	AB=0.833;AC=29;AF=0.630;AN=46;BaseQRankSum=2.076;DP=553;FS=34.702;HRun=0;HaplotypeScore=178.9407;InbreedingCoeff=-0.1779;MQ=50.25;MQ0=17;MQRankSum=-2.656;QD=4.00;ReadPosRankSum=-2.558;VQSLOD=0.4252;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:29:13.17:13,0,214	1/1:8,3:11:3.01:60,3,0	./.	./.	0/0:13,0:17:4.31:0,4,15	1/1:16,1:20:5.66:101,6,0	./.	0/0:22,0:20:0:0,0,0	0/1:26,2:30:47.95:48,0,72	1/1:11,5:16:15.03:223,15,0	./.	0/1:22,1:23:11.39:113,0,11	0/1:11,0:15:26.49:74,0,26	./.	1/1:7,0:6:2:6,2,0	0/1:13,12:25:9.72:225,0,10	1/1:19,7:26:11.63:237,12,0	0/1:14,1:17:17.81:138,0,18	1/1:12,2:13:7.33:167,7,0	1/1:11,4:16:0.47:1,0,0	1/1:29,0:26:6.01:78,6,0	0/1:12,0:16:32.86:37,0,33	0/1:13,1:23:0:0,0,0	0/1:25,2:27:30.70:31,0,35	0/0:16,0:18:3.01:0,3,32	0/1:33,1:36:71.54:151,0,72	0/1:14,0:17:14.41:57,0,14	1/1:8,0:9:5.23:42,5,0
chr10	21384747	.	G	GT	1208.66	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.558;DP=634;FS=7.439;HRun=1;HaplotypeScore=65.2290;InbreedingCoeff=0.9984;MQ=74.94;MQ0=0;MQRankSum=-0.629;QD=36.63;ReadPosRankSum=3.268;VQSLOD=4.0155;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:93.28:0,93,1190	0/0:11,0:11:27.09:0,27,350	0/0:15,0:15:42.10:0,42,507	0/0:17,0:17:39.13:0,39,501	0/0:18,0:18:54.17:0,54,693	0/0:18,0:18:51.14:0,51,646	0/0:32,0:32:93.30:0,93,1207	0/0:22,0:22:66.21:0,66,845	0/0:27,0:27:78.25:0,78,1011	0/0:18,0:18:51.17:0,51,662	0/0:20,0:20:54.18:0,54,698	0/0:37,0:37:99:0,108,1372	0/0:28,0:28:84.26:0,84,1076	0/0:33,0:33:96.28:0,96,1227	1/1:0,33:32:87.29:1304,87,0	0/0:19,0:19:57.19:0,57,739	0/0:27,0:26:81.26:0,81,1051	0/0:20,0:20:60.17:0,60,762	0/0:14,0:14:42.14:0,42,545	0/0:11,0:11:33.11:0,33,428	0/0:31,0:31:90.26:0,90,1137	0/0:16,0:15:36.12:0,36,465	0/0:17,0:17:48.12:0,48,592	0/0:35,0:35:99:0,102,1324	0/0:16,0:16:48.16:0,48,623	0/0:28,0:28:81.25:0,81,1038	0/0:20,0:20:51.03:0,51,638	0/0:18,0:18:42.10:0,42,526
chr10	21385178	.	T	TCACACACA	6705.91	PASS	AB=1.000;AC=43;AF=0.768;AN=56;BaseQRankSum=-5.243;DP=625;FS=7.739;HRun=0;HaplotypeScore=192.4282;InbreedingCoeff=0.5788;MQ=68.80;MQ0=4;MQRankSum=-4.344;QD=13.57;ReadPosRankSum=-4.664;VQSLOD=2.0000;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:41:12.04:0,12,222	1/1:10,0:10:3.01:49,3,0	1/1:23,0:20:1.82:5,2,0	0/1:30,0:29:0:0,0,0	1/1:20,0:20:9.97:208,10,0	1/1:19,0:19:24.08:670,24,0	1/1:16,4:20:6.02:245,6,0	1/1:29,0:29:20.20:304,20,0	1/1:14,0:14:24.08:652,24,0	0/0:15,0:24:12.14:0,12,216	0/0:8,0:14:9.03:0,9,167	1/1:18,3:26:3.01:122,3,0	1/1:17,2:20:15.05:440,15,0	1/1:21,6:31:10.73:347,11,0	1/1:30,0:36:4.42:106,4,0	1/1:12,0:16:8.99:300,9,0	0/0:20,0:35:39.07:0,39,654	1/1:15,0:14:24.07:541,24,0	0/1:13,0:17:10.41:10,0,49	0/1:19,0:22:11.60:12,0,260	0/0:10,0:17:15.05:0,15,279	1/1:20,0:20:12.04:256,12,0	1/1:15,0:15:6.96:122,7,0	1/1:18,9:30:9.03:367,9,0	1/1:16,4:23:10.56:304,11,0	1/1:22,0:21:34.36:802,34,0	1/1:19,0:19:15.52:365,16,0	1/1:14,0:14:15.05:480,15,0
chr10	21385798	.	A	AC	2835.48	PASS	AB=0.825;AC=30;AF=0.536;AN=56;BaseQRankSum=-7.533;DP=310;FS=1.761;HRun=7;HaplotypeScore=38.7994;InbreedingCoeff=0.7986;MQ=73.70;MQ0=0;MQRankSum=-1.224;QD=17.29;ReadPosRankSum=0.749;VQSLOD=2.9568;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:48.20:0,48,449	0/0:1,0:1:3:0,3,29	0/0:13,0:11:12:0,12,116	0/1:9,0:9:0.18:0,0,63	0/0:10,0:10:19.82:0,20,173	1/1:3,7:10:8.99:108,9,0	1/1:2,7:9:2.04:232,2,0	1/1:6,7:13:18.06:217,18,0	1/1:0,10:10:21.06:254,21,0	0/0:13,0:13:24.03:0,24,231	0/0:9,0:9:24.04:0,24,231	1/1:3,7:10:9.03:109,9,0	1/1:2,9:11:8.84:109,9,0	1/1:0,11:11:21.06:253,21,0	0/0:1,0:11:18.11:0,18,52	0/0:8,0:8:24.04:0,24,231	0/0:26,0:26:63.09:0,63,608	1/1:1,9:10:24.07:290,24,0	0/0:9,0:9:18.03:0,18,174	0/0:10,0:10:27.04:0,27,260	0/0:9,0:9:24.04:0,24,231	1/1:1,6:7:12.04:145,12,0	1/1:1,7:8:9.03:109,9,0	1/1:0,13:13:36.11:435,36,0	1/1:3,6:9:12.04:145,12,0	0/1:6,7:13:4.85:219,0,5	1/1:0,12:12:27.07:314,27,0	1/1:1,8:9:9.03:109,9,0
chr10	21386028	.	GAAGA	G	568.55	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=5.388;DP=640;FS=11.052;HRun=0;HaplotypeScore=98.7119;InbreedingCoeff=0.6642;MQ=59.08;MQ0=13;MQRankSum=-1.165;QD=16.24;ReadPosRankSum=1.584;VQSLOD=2.7392;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:77.49:0,77,1640	0/1:9,0:9:10.59:11,0,400	0/0:33,0:18:37.31:0,37,568	0/0:42,0:17:21.71:0,22,259	0/0:22,0:22:57.17:0,57,1288	0/0:19,0:19:45.14:0,45,1003	0/0:19,0:19:57.05:0,57,1080	0/0:23,0:23:50.94:0,51,882	0/0:17,0:17:42.10:0,42,798	0/0:19,0:19:42.14:0,42,1027	0/0:21,0:21:48.12:0,48,1135	0/0:26,0:26:78.26:0,78,1843	0/0:28,0:28:69.18:0,69,1410	0/0:23,0:23:60.20:0,60,1407	1/1:5,21:26:39.12:661,39,0	0/0:21,0:21:54.15:0,54,1147	0/0:29,0:29:75.22:0,75,1668	0/0:32,0:32:54.72:0,55,1701	0/0:21,0:19:22.16:0,22,794	0/0:21,0:21:51.17:0,51,1219	0/0:21,0:21:60.16:0,60,1239	0/0:19,0:19:51.15:0,51,1172	0/0:18,0:18:36.12:0,36,858	0/0:19,0:19:57.18:0,57,1363	0/0:18,0:18:45.14:0,45,1070	0/0:18,0:18:48.14:0,48,1036	0/0:30,0:30:81.15:0,81,1562	0/0:15,0:15:42.08:0,42,848
chr10	21389878	.	AATATATATATATATATATAT	A	1585.43	PASS	AB=0.750;AC=17;AF=0.607;AN=28;BaseQRankSum=-0.582;DP=181;FS=1.680;HRun=0;HaplotypeScore=98.7427;InbreedingCoeff=0.4768;MQ=81.55;MQ0=1;MQRankSum=-1.745;QD=17.42;ReadPosRankSum=0.765;VQSLOD=2.0773;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:3,0:3:6.02:0,6,203	0/0:10,0:8:3.01:0,3,46	0/0:12,0:6:2.50:0,2,9	./.	1/1:11,5:17:3.01:161,3,0	./.	1/1:17,0:17:5.91:54,6,0	./.	./.	./.	./.	1/1:4,3:7:3.01:161,3,0	0/1:2,1:3:0:0,0,0	./.	0/0:2,0:3:3.01:0,3,106	0/0:12,0:12:8.82:0,9,625	1/1:9,4:13:9.03:361,9,0	./.	./.	./.	./.	./.	./.	1/1:4,2:7:3.01:73,3,0	1/1:7,4:12:15.05:673,15,0	1/1:8,0:9:5.99:51,6,0	1/1:5,1:6:3.01:161,3,0
chr10	21389963	.	T	TCA	1694.32	PASS	AB=0.786;AC=31;AF=0.620;AN=50;BaseQRankSum=1.720;DP=459;FS=10.618;HRun=0;HaplotypeScore=77.3167;InbreedingCoeff=0.1964;MQ=45.21;MQ0=36;MQRankSum=-1.149;QD=6.21;ReadPosRankSum=0.385;VQSLOD=1.7381;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:16:14.39:0,14,122	0/0:0,0:1:2.84:0,3,14	./.	./.	0/0:1,0:6:2.84:0,3,14	0/1:15,0:15:6.70:113,0,7	1/1:18,0:18:17.96:143,18,0	1/1:27,0:23:6.43:28,6,0	1/1:11,0:11:14.29:110,14,0	0/1:6,7:12:43.44:166,0,43	0/1:3,6:8:21.20:124,0,21	1/1:7,0:8:11.02:80,11,0	1/1:8,0:8:1.77:4,2,0	1/1:9,0:10:12.88:120,13,0	./.	0/0:1,0:12:25.73:0,26,144	0/1:15,4:19:26.18:132,0,26	0/1:9,0:10:11.47:51,0,11	0/1:8,1:8:24.77:43,0,25	0/0:3,5:8:6.02:0,6,66	0/1:10,18:30:99:194,0,121	0/0:6,0:5:0.47:0,0,1	1/1:7,0:7:9:93,9,0	1/1:1,0:19:13.55:109,14,0	1/1:9,0:9:3:30,3,0	1/1:23,0:19:25.33:176,25,0	1/1:7,0:15:15.17:89,15,0	1/1:9,0:7:5.98:47,6,0
chr10	21389998	.	CAG	C	2496.42	PASS	AB=0.990;AC=35;AF=0.625;AN=56;BaseQRankSum=-0.572;DP=462;FS=2.207;HRun=0;HaplotypeScore=79.9453;InbreedingCoeff=0.5502;MQ=55.42;MQ0=12;MQRankSum=0.521;QD=8.76;ReadPosRankSum=-2.969;VQSLOD=2.8131;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:25:26.30:0,26,280	1/1:1,0:1:2.90:16,3,0	0/0:28,0:15:19.46:0,19,304	0/0:25,0:10:23.73:0,24,256	0/1:7,0:7:0.94:1,0,40	1/1:24,0:24:21.43:285,21,0	1/1:25,2:27:31.76:287,32,0	1/1:29,0:26:68.13:520,68,0	1/1:13,1:14:4.40:102,4,0	0/1:14,0:14:7.94:8,0,166	0/0:14,0:14:26.97:0,27,297	1/1:12,0:12:10.59:122,11,0	1/1:11,0:11:15.27:113,15,0	1/1:10,0:10:6.07:64,6,0	1/1:4,1:5:8.98:72,9,0	0/1:13,0:13:20.85:57,0,21	0/0:20,0:20:39.02:0,39,402	0/1:14,0:13:5.73:133,0,6	0/0:10,0:9:6.04:0,6,144	0/0:7,0:7:6.02:0,6,104	0/0:47,0:46:79.79:0,80,874	1/1:9,0:9:4.19:70,4,0	1/1:11,0:11:16.24:127,16,0	1/1:24,0:24:13.56:139,14,0	1/1:12,0:11:20.75:161,21,0	0/1:19,1:18:38.15:127,0,38	1/1:18,0:18:13.98:155,14,0	1/1:10,0:9:17.80:133,18,0
chr10	21391385	.	C	CAA	5831.23	PASS	AB=0.833;AC=39;AF=0.696;AN=56;BaseQRankSum=-5.269;DP=248;FS=0.850;HRun=8;HaplotypeScore=33.5312;InbreedingCoeff=0.8819;MQ=86.76;MQ0=0;MQRankSum=-1.093;QD=35.34;ReadPosRankSum=2.504;VQSLOD=4.1052;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:4,0:5:4.78:5,0,119	1/1:0,3:3:3.01:48,3,0	0/0:10,0:9:27.05:0,27,290	0/0:9,0:9:18.70:0,19,158	1/1:1,12:13:33.07:495,33,0	1/1:0,8:8:18.06:286,18,0	1/1:0,8:9:20.56:294,21,0	1/1:1,14:16:44.62:642,45,0	1/1:0,10:10:21.07:333,21,0	0/0:13,0:13:36.10:0,36,401	0/0:11,0:11:33.09:0,33,367	1/1:0,7:7:21.07:333,21,0	1/1:0,4:4:9.03:143,9,0	1/1:0,3:4:12.04:180,12,0	1/1:0,0:9:22.46:77,22,0	1/1:0,8:8:24.08:381,24,0	0/0:14,0:14:39.10:0,39,431	1/1:1,8:10:18.06:285,18,0	0/0:12,0:12:33.06:0,33,356	0/0:9,0:9:27.07:0,27,301	0/0:5,0:5:15.04:0,15,167	1/1:0,6:6:18.06:286,18,0	1/1:0,6:7:17.55:247,18,0	1/1:0,9:9:21.07:333,21,0	1/1:0,8:8:21.07:333,21,0	1/1:0,11:12:35.59:490,36,0	1/1:2,8:11:24.05:355,24,0	1/1:0,6:6:18.06:285,18,0
chr10	21391519	.	CG	C	611.24	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.290;DP=462;FS=8.577;HRun=3;HaplotypeScore=45.9547;InbreedingCoeff=0.9523;MQ=90.69;MQ0=0;MQRankSum=-2.187;QD=26.58;ReadPosRankSum=1.791;VQSLOD=1.9908;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:72.24:0,72,1027	0/0:4,0:4:12.04:0,12,168	0/0:23,0:23:63.12:0,63,816	0/0:23,0:23:63.17:0,63,863	0/0:19,0:19:57.19:0,57,818	0/0:19,0:19:54.17:0,54,758	0/0:23,0:23:66.22:0,66,946	0/0:29,0:29:81.25:0,81,1115	0/0:12,0:12:36.12:0,36,516	0/0:11,0:11:33.10:0,33,457	0/0:9,0:9:24.08:0,24,344	0/0:16,0:16:48.16:0,48,683	0/0:15,0:15:42.14:0,42,604	0/0:16,0:16:45.15:0,45,647	1/1:1,22:23:57.18:706,57,0	0/0:17,0:17:45.15:0,45,647	0/0:20,0:20:60.20:0,60,860	0/0:11,0:11:33.11:0,33,475	0/0:19,0:19:57.18:0,57,802	0/0:13,0:13:39.13:0,39,560	0/0:24,0:24:72.23:0,72,1017	0/0:12,0:12:36.11:0,36,494	0/0:11,0:11:30.10:0,30,430	0/0:18,0:18:51.17:0,51,729	0/0:12,0:12:36.11:0,36,501	0/0:18,0:18:54.18:0,54,777	0/0:16,0:14:42.14:0,42,603	0/0:5,0:5:15.02:0,15,178
chr10	21391796	.	T	TGACAAAATCCCAACGAACATGGT	67307.79	PASS	AB=0.727;AC=55;AF=0.982;AN=56;BaseQRankSum=-1.462;DP=358;FS=8.495;HRun=0;HaplotypeScore=316.3925;InbreedingCoeff=-0.0269;MQ=68.45;MQ0=0;MQRankSum=-2.329;QD=188.01;ReadPosRankSum=2.357;VQSLOD=3.4654;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:24:61.90:4737,62,0	1/1:2,0:2:6.02:535,6,0	1/1:7,0:11:19.85:1180,20,0	0/1:5,1:5:50.43:905,0,50	1/1:9,0:9:18.06:1150,18,0	1/1:13,0:13:39.09:2498,39,0	1/1:18,0:18:54.19:3599,54,0	1/1:25,0:24:72.24:4736,72,0	1/1:13,0:13:36.06:2307,36,0	1/1:11,0:11:33.10:1642,33,0	1/1:8,0:8:24.08:1963,24,0	1/1:12,0:12:36.12:2911,36,0	1/1:17,0:17:51.06:3191,51,0	1/1:16,0:16:42.14:3675,42,0	1/1:28,0:28:72.10:4282,72,0	1/1:19,0:19:51.18:4069,51,0	1/1:17,0:17:48.09:3135,48,0	1/1:8,0:8:24.08:1009,24,0	1/1:11,0:11:30.10:2046,30,0	1/1:9,0:9:27.02:2032,27,0	1/1:8,0:8:18.06:1422,18,0	1/1:10,0:10:24.08:2071,24,0	1/1:8,0:8:24.08:1530,24,0	1/1:11,0:11:33.11:2738,33,0	1/1:7,0:7:21.07:1566,21,0	1/1:17,0:17:39.68:3122,40,0	1/1:15,0:15:45.14:2846,45,0	1/1:2,0:2:6.02:411,6,0
chr10	21392065	.	A	AG	197.05	PASS	AC=2;AF=0.037;AN=54;BaseQRankSum=1.561;DP=366;FS=8.520;HRun=7;HaplotypeScore=55.7545;InbreedingCoeff=0.7428;MQ=76.51;MQ0=3;MQRankSum=1.077;QD=16.42;ReadPosRankSum=-0.305;VQSLOD=2.7674;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:26:51.07:0,51,492	0/0:7,0:7:14.98:0,15,136	0/0:26,0:23:10.77:0,11,350	0/0:34,0:28:27.32:0,27,403	0/0:14,0:14:33.05:0,33,319	0/0:10,0:10:30.05:0,30,290	0/0:26,0:25:60.09:0,60,579	0/0:11,0:11:12:0,12,116	0/0:6,0:6:15.02:0,15,145	0/0:7,0:7:20.98:0,21,193	./.	0/0:19,0:19:42.05:0,42,400	0/0:9,0:9:20.96:0,21,203	0/0:12,0:12:27.04:0,27,261	1/1:3,9:12:24.07:290,24,0	0/0:9,0:9:27.03:0,27,255	0/0:11,0:11:18.02:0,18,174	0/0:13,0:13:21.03:0,21,203	0/0:11,0:11:30.05:0,30,290	0/0:7,0:7:21.03:0,21,202	0/0:31,0:31:72.11:0,72,695	0/0:6,0:6:12.02:0,12,116	0/0:9,0:9:21.02:0,21,197	0/0:20,0:18:42.07:0,42,406	0/0:4,0:4:9:0,9,81	0/0:8,0:8:20.98:0,21,193	0/0:12,0:12:30.05:0,30,290	0/0:2,0:2:6.01:0,6,58
chr10	21392135	.	GGA	G	182.41	PASS	AB=0.782;AC=23;AF=0.575;AN=40;BaseQRankSum=1.509;DP=146;FS=2.661;HRun=0;HaplotypeScore=40.3474;InbreedingCoeff=0.0925;MQ=27.35;MQ0=19;MQRankSum=0.639;QD=2.22;ReadPosRankSum=0.754;VQSLOD=1.4435;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	0/0:3,0:1:3.01:0,3,58	1/1:2,0:2:2.99:24,3,0	0/1:3,4:7:11.80:17,0,12	0/1:6,7:12:12.78:75,0,13	0/1:9,2:7:21.54:22,0,46	0/1:5,2:5:4:4,0,11	0/0:3,0:3:0.52:0,1,4	./.	1/1:4,1:5:1.37:3,1,0	1/1:4,2:5:1.44:40,1,0	1/1:2,2:2:2.80:13,3,0	0/0:10,0:9:23.56:0,24,149	1/1:4,0:2:1.82:5,2,0	0/1:5,0:5:13.31:13,0,29	1/1:2,2:3:2.92:17,3,0	./.	./.	0/0:16,0:15:2.53:0,3,50	./.	./.	0/0:5,0:2:5.63:0,6,31	1/1:3,4:5:2.42:15,2,0	1/1:2,2:4:6.93:42,7,0	0/0:2,0:2:2.84:0,3,9	1/1:2,1:2:2.74:12,3,0
chr10	21392165	.	G	GA	218.63	PASS	AB=0.927;AC=19;AF=0.380;AN=50;BaseQRankSum=2.563;DP=178;FS=2.856;HRun=1;HaplotypeScore=37.8764;InbreedingCoeff=0.2908;MQ=47.75;MQ0=21;MQRankSum=-2.762;QD=3.26;ReadPosRankSum=-0.708;VQSLOD=-0.3252;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:11:14.97:0,15,200	./.	0/1:15,0:3:0:0,0,0	0/0:28,0:4:6.02:0,6,80	1/1:2,0:2:1.25:3,1,0	0/1:8,2:9:24.55:53,0,25	0/1:11,0:10:34.34:57,0,34	0/0:10,0:7:10.56:0,11,70	0/0:4,0:3:1.55:0,2,4	0/0:4,0:4:9.03:0,9,117	0/0:4,0:3:0:0,0,0	0/0:4,0:3:1.23:0,1,3	1/1:3,0:3:0.23:15,0,0	0/0:4,0:3:0.47:0,0,1	0/1:3,0:3:0:0,0,0	0/1:3,1:4:24.78:25,0,41	1/1:4,2:5:6.07:45,6,0	0/0:2,0:2:1.55:0,2,4	0/0:9,0:4:12.04:0,12,152	0/0:4,0:1:2.68:0,3,11	0/0:22,0:21:30.44:0,30,400	1/1:2,0:1:2.04:6,2,0	./.	1/1:0,1:1:2.80:13,3,0	1/1:4,0:3:2.54:13,3,0	1/1:6,0:5:6.33:113,6,0	./.	0/0:2,0:2:1.55:0,2,4
chr10	21392173	.	AGAGAGG	A	448.20	PASS	AB=1.000;AC=18;AF=0.529;AN=34;BaseQRankSum=3.509;DP=175;FS=5.492;HRun=0;HaplotypeScore=40.1704;InbreedingCoeff=0.4678;MQ=52.34;MQ0=18;MQRankSum=-3.731;QD=4.77;ReadPosRankSum=0.697;VQSLOD=0.5194;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:14:26.68:0,27,454	./.	0/1:23,0:4:11.97:12,0,29	0/1:33,0:7:1.65:2,0,46	./.	1/1:6,2:7:9.03:117,9,0	1/1:7,3:9:17.98:268,18,0	0/0:6,0:5:3.01:0,3,45	1/1:3,0:3:2.96:19,3,0	0/0:5,0:5:8.98:0,9,114	0/0:4,0:3:6.01:0,6,89	./.	./.	1/1:3,1:3:5.80:33,6,0	./.	0/0:5,0:5:6.01:0,6,126	1/1:4,0:5:0.47:1,0,0	./.	0/0:8,0:4:8.99:0,9,120	./.	0/0:19,0:18:24.49:0,24,607	1/1:2,0:1:3.01:63,3,0	./.	1/1:1,0:1:3.01:54,3,0	./.	1/1:5,0:3:1.82:5,2,0	./.	./.
chr10	21392220	.	ACGGG	A	891.47	PASS	AB=0.993;AC=18;AF=0.346;AN=52;BaseQRankSum=4.241;DP=166;FS=1.753;HRun=0;HaplotypeScore=60.4204;InbreedingCoeff=-0.2453;MQ=63.74;MQ0=3;MQRankSum=-5.031;QD=9.80;ReadPosRankSum=-0.942;VQSLOD=2.4179;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:5:15.05:0,15,353	0/1:3,0:3:34.49:92,0,34	0/0:11,0:8:19.66:0,20,180	0/0:21,0:11:21.80:0,22,253	0/0:5,2:6:0:0,0,0	0/1:7,0:7:15.79:16,0,189	0/1:3,0:2:14.73:15,0,35	./.	0/1:8,0:8:99:110,0,168	0/0:8,0:8:21.04:0,21,382	0/0:1,0:1:3.01:0,3,84	0/1:9,0:8:99:159,0,111	0/1:5,0:5:37.14:117,0,37	0/1:4,0:4:13.59:29,0,14	1/1:4,2:6:7.36:109,7,0	0/1:8,0:8:32.73:33,0,201	0/0:7,0:7:18.06:0,18,343	0/1:2,0:2:3.94:29,0,4	0/0:3,0:2:6.02:0,6,86	0/0:4,0:4:9.03:0,9,153	0/1:8,1:8:11.26:11,0,425	0/1:5,0:5:59.26:59,0,118	0/0:4,0:4:9.03:0,9,257	./.	0/1:4,0:4:37.91:91,0,38	0/1:9,0:9:80.40:80,0,207	0/1:8,0:7:40.37:40,0,95	1/1:1,0:1:3.01:52,3,0
chr10	21392221	.	C	CA	477.77	PASS	AB=0.711;AC=19;AF=0.365;AN=52;BaseQRankSum=5.824;DP=182;FS=1.708;HRun=1;HaplotypeScore=64.6431;InbreedingCoeff=-0.1740;MQ=62.04;MQ0=2;MQRankSum=-4.139;QD=4.78;ReadPosRankSum=1.203;VQSLOD=0.6226;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:5:15.05:0,15,209	0/1:2,2:4:29.77:33,0,30	0/0:9,0:8:16.19:0,16,167	0/0:20,0:11:3.81:0,4,152	./.	0/1:7,3:10:23.63:24,0,108	0/1:2,1:3:12.50:13,0,35	1/1:2,1:1:1.55:4,2,0	0/1:4,4:8:65.83:66,0,96	0/0:7,0:7:18.05:0,18,237	0/0:2,0:2:3.01:0,3,42	0/1:6,5:10:70.16:70,0,77	0/1:2,3:5:42.01:62,0,42	0/1:4,2:6:10.09:26,0,10	1/1:5,3:8:8.97:72,9,0	0/1:4,4:8:65.84:66,0,102	0/0:7,0:7:18.04:0,18,230	0/1:2,1:2:1.96:22,0,2	0/0:4,0:2:6.02:0,6,84	0/0:4,0:4:9.03:0,9,121	0/0:9,0:8:15.09:0,15,282	0/1:3,3:6:14.93:15,0,74	0/0:4,0:4:9.03:0,9,119	./.	0/1:2,3:5:11.03:32,0,11	0/1:7,2:9:29.19:29,0,170	0/1:6,3:8:72.15:72,0,85	1/1:0,1:1:2.99:24,3,0
chr10	21392224	.	G	GA	747.72	PASS	AB=0.711;AC=22;AF=0.407;AN=54;BaseQRankSum=5.520;DP=195;FS=0.000;HRun=0;HaplotypeScore=59.3260;InbreedingCoeff=-0.0920;MQ=61.01;MQ0=3;MQRankSum=-4.528;QD=7.26;ReadPosRankSum=0.336;VQSLOD=3.1639;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:5:15.05:0,15,209	0/1:2,2:4:10.27:51,0,10	0/0:14,0:8:17.92:0,18,184	0/0:21,0:10:1.18:0,1,152	./.	0/1:7,3:10:20.92:21,0,102	0/1:3,1:3:12.70:30,0,13	1/1:1,1:0:3:26,3,0	0/1:4,4:8:64.25:64,0,105	0/0:6,0:6:15.05:0,15,210	0/0:3,0:3:9:0,9,93	0/1:6,5:10:39.52:151,0,40	0/1:2,3:5:37.66:62,0,38	0/1:4,2:6:11.83:58,0,12	1/1:5,3:8:14.96:119,15,0	0/1:4,4:8:65.87:66,0,85	0/0:8,0:8:18.06:0,18,250	1/1:2,1:2:0.64:24,1,0	0/0:7,0:4:12.02:0,12,135	0/0:5,0:5:12.03:0,12,152	0/0:10,0:9:14.30:0,14,280	0/1:3,3:6:30.76:31,0,72	0/0:4,0:4:9.03:0,9,124	1/1:1,0:1:2.97:20,3,0	0/1:2,3:5:14.78:57,0,15	0/1:10,2:12:33.30:33,0,133	0/1:6,3:8:67.75:73,0,68	1/1:0,1:1:2.99:24,3,0
chr10	21392292	.	A	AAG	3004.71	PASS	AB=0.815;AC=36;AF=0.643;AN=56;BaseQRankSum=2.670;DP=449;FS=5.926;HRun=0;HaplotypeScore=90.0567;InbreedingCoeff=0.6559;MQ=37.86;MQ0=25;MQRankSum=-2.484;QD=12.02;ReadPosRankSum=-0.423;VQSLOD=2.7205;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:11:4.76:0,5,175	1/1:6,0:5:6.02:66,6,0	0/0:40,0:4:3.01:0,3,37	0/0:65,0:12:8.79:0,9,83	1/1:12,0:11:4.84:55,5,0	1/1:10,0:8:3.01:47,3,0	1/1:8,3:11:18.05:246,18,0	1/1:25,0:20:38.50:421,38,0	1/1:14,2:15:18.06:253,18,0	0/0:5,0:5:2.86:0,3,59	0/0:9,0:9:17.80:0,18,180	1/1:13,4:14:11.98:151,12,0	1/1:13,4:15:8.48:105,8,0	1/1:9,6:12:26.75:299,27,0	1/1:9,3:10:14.53:171,15,0	1/1:12,3:12:7:170,7,0	0/0:21,0:20:17.76:0,18,246	0/1:5,2:4:1.05:85,0,1	0/0:16,0:10:12.08:0,12,149	0/0:11,0:11:20.30:0,20,151	0/0:18,0:16:21.05:0,21,280	1/1:7,7:13:14.97:174,15,0	1/1:9,2:11:29.40:286,29,0	1/1:6,4:5:6.02:89,6,0	1/1:8,2:9:14.03:127,14,0	0/1:19,4:20:11.81:282,0,12	1/1:10,1:11:8.61:83,9,0	1/1:4,4:8:6.02:83,6,0
chr10	21392311	.	A	AGAGAGA	2051.84	PASS	AB=1.000;AC=42;AF=0.875;AN=48;BaseQRankSum=-1.600;DP=484;FS=13.489;HRun=0;HaplotypeScore=118.6065;InbreedingCoeff=0.2170;MQ=37.31;MQ0=25;MQRankSum=1.650;QD=5.72;ReadPosRankSum=0.678;VQSLOD=1.5006;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:15:5.99:65,6,0	./.	./.	0/0:43,0:9:3:0,3,25	1/1:13,0:11:1.89:21,2,0	1/1:11,0:9:2.11:18,2,0	1/1:14,0:14:6.47:51,6,0	1/1:35,0:31:16.41:113,16,0	1/1:20,0:19:14.48:153,14,0	1/1:11,0:11:10.78:190,11,0	1/1:8,0:8:3.01:53,3,0	./.	1/1:18,0:16:3.26:20,3,0	1/1:24,0:20:5.43:43,5,0	1/1:17,0:15:5.99:50,6,0	1/1:21,0:18:10.68:89,11,0	1/1:17,9:26:21.50:413,22,0	0/1:12,0:9:15.30:15,0,28	1/1:16,0:14:21.01:214,21,0	1/1:8,0:8:3.01:39,3,0	1/1:22,0:20:20.93:287,21,0	0/0:23,0:21:0.84:0,1,2	0/1:12,0:12:0:0,0,0	./.	1/1:11,0:10:3:25,3,0	1/1:26,0:23:41.32:277,41,0	1/1:8,0:8:1.82:5,2,0	1/1:9,0:9:2.37:9,2,0
chr10	21394419	.	T	TA	427.57	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=-2.420;DP=602;FS=3.025;HRun=8;HaplotypeScore=60.7318;InbreedingCoeff=0.6520;MQ=84.40;MQ0=0;MQRankSum=0.875;QD=10.18;ReadPosRankSum=-2.129;VQSLOD=1.7340;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,16:18:45.13:520,45,0	0/0:8,0:8:24.01:0,24,220	0/0:19,0:19:32.14:0,32,252	0/1:24,0:24:11.10:11,0,330	0/0:24,0:24:63.03:0,63,576	0/0:24,0:24:60.03:0,60,549	0/0:15,0:15:42.02:0,42,384	0/0:33,0:33:81.03:0,81,738	0/0:26,0:26:75.04:0,75,686	0/0:26,0:26:75.03:0,75,684	0/0:28,0:28:81.04:0,81,741	0/0:20,0:20:45.02:0,45,412	0/0:31,0:31:87.03:0,87,790	0/0:25,0:25:46.58:0,47,602	0/0:24,0:25:68.07:0,68,610	0/0:21,0:21:63.03:0,63,576	0/0:18,0:18:48.01:0,48,439	0/0:9,0:9:23.97:0,24,211	0/0:16,0:16:45.02:0,45,412	0/0:26,0:26:72.02:0,72,654	0/0:9,0:9:21.01:0,21,192	0/0:33,0:33:90:0,90,811	0/0:23,0:23:66.02:0,66,599	0/0:18,0:18:41.96:0,42,376	0/0:22,0:22:66.03:0,66,602	0/0:17,0:17:45.02:0,45,412	0/0:39,0:39:99:0,111,1011	0/0:4,0:5:14.04:0,14,116
chr10	21395519	.	AG	A	4984.65	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=0.655;DP=457;FS=1.397;HRun=1;HaplotypeScore=55.2250;InbreedingCoeff=0.9421;MQ=72.17;MQ0=10;MQRankSum=0.470;QD=22.06;ReadPosRankSum=0.888;VQSLOD=4.9110;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:30.49:0,30,594	0/0:7,0:7:14.45:0,14,79	0/0:27,1:21:19.54:0,20,412	0/0:24,0:18:34.66:0,35,348	0/0:16,0:16:40.52:0,41,228	1/1:2,13:14:13.74:205,14,0	1/1:4,10:12:24.30:333,24,0	1/1:1,21:20:60.05:642,60,0	1/1:2,10:11:12.04:166,12,0	0/0:24,0:24:66.55:0,67,758	0/0:14,1:15:0.73:0,1,421	1/1:1,14:15:23.35:331,23,0	1/1:0,17:16:30.10:404,30,0	1/1:5,6:11:28.10:350,28,0	0/0:21,0:20:11.55:0,12,93	0/0:16,0:16:38.07:0,38,242	0/0:16,0:16:42.05:0,42,515	1/1:1,8:9:15.04:184,15,0	0/0:19,0:19:47.03:0,47,470	0/0:14,0:12:33.02:0,33,390	0/0:8,0:8:20.99:0,21,213	1/1:15,1:16:11.76:157,12,0	1/1:14,6:18:39.14:394,39,0	1/1:4,8:12:29.12:379,29,0	1/1:0,8:8:18.06:249,18,0	1/1:1,17:16:48.01:527,48,0	1/1:0,19:19:30.07:387,30,0	1/1:2,16:18:22.90:276,23,0
chr10	21395520	.	GAA	G	783.72	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=0.980;DP=465;FS=6.101;HRun=11;HaplotypeScore=78.3946;InbreedingCoeff=0.9714;MQ=73.57;MQ0=10;MQRankSum=0.367;QD=13.28;ReadPosRankSum=4.043;VQSLOD=2.0096;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:54.48:0,54,751	1/1:0,7:7:15.03:160,15,0	0/0:27,0:21:14.81:0,15,136	0/0:25,0:19:17.91:0,18,203	1/1:2,14:16:39.06:414,39,0	0/0:14,0:14:17.79:0,18,139	0/0:12,0:12:29.66:0,30,226	0/0:22,0:21:56.58:0,57,435	0/0:12,0:12:17.79:0,18,122	0/0:25,0:25:57.14:0,57,779	0/0:17,0:17:50.70:0,51,632	0/0:15,0:15:29.61:0,30,218	0/0:18,0:17:32.54:0,33,218	0/0:12,0:12:29.54:0,30,209	1/1:5,0:20:27.31:82,27,0	1/1:3,12:15:27.06:287,27,0	0/0:16,0:16:42.12:0,42,596	0/0:9,0:9:17.78:0,18,125	0/0:18,0:20:50.16:0,50,541	0/0:12,0:12:36.06:0,36,481	0/0:7,0:8:17.53:0,18,200	0/0:16,0:16:44.66:0,45,469	0/0:18,0:18:30.95:0,31,326	0/0:12,0:12:35.17:0,35,275	0/0:8,0:8:17.70:0,18,115	0/0:18,0:16:36.82:0,37,258	0/0:19,0:19:32.57:0,33,220	0/0:18,0:18:15.54:0,16,164
chr10	21395925	.	C	CT	9551.80	PASS	AB=0.806;AC=38;AF=0.679;AN=56;BaseQRankSum=-7.706;DP=608;FS=1.660;HRun=9;HaplotypeScore=72.7909;InbreedingCoeff=0.8671;MQ=79.77;MQ0=1;MQRankSum=-1.978;QD=21.71;ReadPosRankSum=1.438;VQSLOD=5.6985;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:71.25:0,71,736	1/1:9,0:9:23.59:149,24,0	0/0:34,1:29:27.42:0,27,267	0/1:21,0:17:16.01:16,0,81	1/1:37,0:37:88.49:554,88,0	1/1:5,20:25:34.11:604,34,0	1/1:2,19:22:60:645,60,0	1/1:7,16:24:50.94:526,51,0	1/1:4,16:20:42.11:465,42,0	0/0:20,0:20:53.97:0,54,466	0/0:18,0:19:47.02:0,47,394	1/1:3,13:16:32.87:365,33,0	1/1:5,18:23:31.11:569,31,0	1/1:1,20:21:42.11:465,42,0	1/1:4,23:27:34.22:605,34,0	1/1:25,0:25:67.72:419,68,0	0/0:16,0:16:41.96:0,42,360	1/1:3,23:26:51.14:564,51,0	0/0:16,0:16:32.97:0,33,284	0/0:13,0:13:32.99:0,33,285	0/0:10,0:10:26.98:0,27,234	1/1:3,9:12:24.06:265,24,0	1/1:4,18:22:25.07:505,25,0	1/1:2,16:18:45.12:498,45,0	1/1:4,17:21:39.11:431,39,0	1/1:4,20:24:60.16:664,60,0	1/1:2,34:36:73.28:1036,73,0	0/1:4,7:11:1.99:208,0,2
chr10	21395926	.	T	TC	3732.66	PASS	AB=1.000;AC=25;AF=0.446;AN=56;BaseQRankSum=7.624;DP=602;FS=2.271;HRun=1;HaplotypeScore=91.2042;InbreedingCoeff=-0.0573;MQ=79.97;MQ0=1;MQRankSum=-0.304;QD=8.56;ReadPosRankSum=6.667;VQSLOD=1.0775;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:36:99:0,107,1361	1/1:0,9:9:24.08:343,24,0	0/0:36,0:29:30.46:0,30,478	0/1:21,0:17:49.61:50,0,163	1/1:0,37:37:99:1344,102,0	0/1:25,0:25:45.31:80,0,45	0/1:21,0:21:0.15:63,0,0	0/1:26,0:26:55.41:55,0,95	0/1:20,0:20:44.67:45,0,63	0/0:20,0:20:60.19:0,60,806	0/0:19,0:19:57.06:0,57,723	0/1:15,0:15:28.22:33,0,28	0/1:23,0:23:63.73:64,0,75	1/1:21,0:21:5.19:76,5,0	0/1:25,0:25:26.72:64,0,27	1/1:0,25:25:69.23:986,69,0	0/0:16,0:16:48.14:0,48,629	0/1:26,0:26:44.83:70,0,45	0/0:15,0:15:45.10:0,45,556	0/0:13,0:13:39.11:0,39,504	0/0:10,0:10:30.09:0,30,401	0/1:12,0:12:28.52:29,0,73	0/1:22,0:22:50.58:84,0,51	0/1:18,0:18:11.27:61,0,11	0/1:21,0:21:36.53:37,0,45	0/1:24,0:24:53.42:63,0,53	1/1:35,0:35:27.64:165,28,0	0/1:10,0:10:21.74:22,0,71
chr10	21397511	.	G	GA	5843.09	PASS	AB=0.749;AC=33;AF=0.589;AN=56;BaseQRankSum=-6.595;DP=601;FS=3.320;HRun=12;HaplotypeScore=76.4534;InbreedingCoeff=0.6032;MQ=68.45;MQ0=2;MQRankSum=-1.487;QD=12.84;ReadPosRankSum=0.046;VQSLOD=4.9867;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:43,2:47:20.88:21,0,430	1/1:1,8:10:22.12:192,22,0	0/0:9,0:10:8.70:0,9,52	0/0:9,0:9:8:0,8,51	1/1:6,23:29:14.04:426,14,0	1/1:4,17:21:10.27:423,10,0	1/1:6,21:27:29.15:437,29,0	1/1:10,14:24:20.11:338,20,0	1/1:5,17:22:11.14:270,11,0	0/0:22,0:23:34.26:0,34,246	0/0:16,0:17:37.77:0,38,268	1/1:5,19:24:4.25:361,4,0	1/1:5,23:28:57.09:553,57,0	1/1:5,20:25:14.10:286,14,0	0/0:2,0:14:24.44:0,24,72	0/0:16,0:16:23.51:0,24,304	0/0:23,0:23:44.64:0,45,328	1/1:6,25:32:34.13:636,34,0	0/1:28,2:32:0.75:1,0,303	0/0:14,0:15:22.81:0,23,159	0/0:14,2:16:6.57:0,7,211	1/1:10,11:21:8.80:385,9,0	0/1:10,11:21:16.79:168,0,17	1/1:8,21:30:29.07:431,29,0	0/1:5,12:17:9.47:231,0,9	1/1:7,11:18:11.02:243,11,0	1/1:4,13:18:35.98:338,36,0	0/1:3,6:9:6.89:102,0,7
chr10	21400519	.	T	TTGTG	10103.31	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-11.141;DP=849;FS=7.522;HRun=0;HaplotypeScore=190.6692;InbreedingCoeff=0.9411;MQ=67.15;MQ0=4;MQRankSum=0.042;QD=22.60;ReadPosRankSum=-3.530;VQSLOD=3.0722;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:57.15:0,57,850	0/0:10,0:11:12.03:0,12,175	0/0:35,0:24:7.21:0,7,306	0/0:42,0:33:23.81:0,24,266	0/0:23,0:25:44.91:0,45,524	1/1:31,4:35:71.46:1402,71,0	1/1:7,17:26:12.04:292,12,0	1/1:11,12:22:35.86:434,36,0	1/1:26,1:29:53.61:1090,54,0	0/0:6,0:35:62.56:0,63,683	0/0:6,0:20:35.96:0,36,323	1/1:12,24:38:26.62:581,27,0	1/1:15,35:53:35.06:791,35,0	1/1:11,22:34:30.10:727,30,0	0/0:9,0:26:45.36:0,45,387	0/0:10,0:30:56.10:0,56,510	0/0:9,0:39:54.14:0,54,678	1/1:5,15:19:18.06:435,18,0	0/0:11,0:25:28.88:0,29,250	0/0:10,0:38:74.74:0,75,665	0/0:16,0:42:62.88:0,63,578	1/1:18,9:28:60.16:1272,60,0	1/1:5,20:27:5.77:126,6,0	1/1:10,22:34:10.76:231,11,0	1/1:29,0:30:35.82:668,36,0	1/1:17,21:42:80.86:1541,81,0	1/1:4,15:21:14.84:366,15,0	1/1:4,3:7:6.02:146,6,0
chr10	21400551	.	TTGTA	T	3651.68	PASS	AB=0.918;AC=17;AF=0.327;AN=52;BaseQRankSum=1.450;DP=786;FS=1.504;HRun=0;HaplotypeScore=198.8178;InbreedingCoeff=0.7113;MQ=53.09;MQ0=22;MQRankSum=-3.001;QD=13.38;ReadPosRankSum=-0.110;VQSLOD=3.3454;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:33.10:0,33,727	1/1:5,8:13:5.99:60,6,0	./.	./.	0/0:19,0:27:34.53:0,35,681	0/0:19,0:31:29.86:0,30,425	0/0:22,0:22:24.05:0,24,456	0/0:24,0:22:17.97:0,18,236	0/1:20,2:22:6.17:239,0,6	1/1:30,8:36:51.13:728,51,0	1/1:15,6:21:35.90:470,36,0	0/0:37,0:37:45.08:0,45,891	0/0:40,0:40:42.04:0,42,883	0/0:30,0:30:51.13:0,51,1036	0/0:23,0:32:55.75:0,56,873	1/1:15,19:34:38.71:582,39,0	0/1:29,7:36:40.36:369,0,40	0/1:19,0:18:16.18:16,0,454	1/1:16,5:19:15.05:232,15,0	1/1:24,7:31:41.69:454,42,0	1/1:32,6:36:36.05:501,36,0	0/0:22,0:32:5.23:0,5,172	0/0:24,0:24:30.10:0,30,636	0/0:28,0:28:33.09:0,33,701	0/0:24,0:24:27.09:0,27,575	0/0:30,0:30:42.14:0,42,920	0/0:35,0:35:69.20:0,69,1416	0/0:6,0:6:12.04:0,12,282
chr10	21403915	.	T	TC	5237.29	PASS	AB=0.712;AC=47;AF=0.839;AN=56;BaseQRankSum=-4.048;DP=535;FS=29.554;HRun=10;HaplotypeScore=76.6320;InbreedingCoeff=-0.1614;MQ=84.94;MQ0=1;MQRankSum=-2.695;QD=9.79;ReadPosRankSum=0.438;VQSLOD=1.7136;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:11,15:26:2.22:202,2,0	1/1:1,3:4:9:87,9,0	0/1:23,1:25:32.63:33,0,159	0/1:22,0:20:6.57:7,0,56	1/1:10,11:21:8.33:268,8,0	1/1:8,9:17:18.05:192,18,0	1/1:8,14:23:8.33:278,8,0	1/1:10,14:24:15.46:273,15,0	1/1:5,15:21:2.43:230,2,0	1/1:5,10:15:21.03:213,21,0	1/1:5,6:11:12.03:126,12,0	1/1:5,17:23:2.28:217,2,0	0/1:5,15:20:1.79:174,0,2	0/1:11,10:21:4.50:108,0,4	1/1:7,14:21:24.03:244,24,0	1/1:4,20:25:41.89:441,42,0	0/1:14,16:30:0.52:200,0,1	0/1:3,0:7:15.75:36,0,16	1/1:6,8:14:13.31:156,13,0	1/1:6,8:14:17.98:177,18,0	1/1:12,11:21:27.03:273,27,0	1/1:5,6:11:12.03:128,12,0	0/1:6,8:14:3.53:166,0,4	1/1:5,12:17:24.06:253,24,0	1/1:13,13:26:6.50:197,7,0	0/1:9,9:18:8.43:156,0,8	0/1:11,14:25:61.96:136,0,62	1/1:5,9:14:9.14:268,9,0
chr10	21404266	.	TC	T	902.51	PASS	AB=1.000;AC=7;AF=0.130;AN=54;BaseQRankSum=1.422;DP=412;FS=0.647;HRun=10;HaplotypeScore=63.7292;InbreedingCoeff=0.6340;MQ=88.97;MQ0=1;MQRankSum=-1.372;QD=14.33;ReadPosRankSum=4.289;VQSLOD=3.8655;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,1:27:33.65:0,34,553	1/1:0,6:6:5.90:42,6,0	0/0:33,1:30:14.08:0,14,375	0/0:24,0:24:40.82:0,41,402	1/1:2,18:20:41.99:364,42,0	0/0:9,0:11:3.94:0,4,26	0/0:20,0:22:19.18:0,19,114	0/0:12,0:12:3.87:0,4,25	0/0:2,0:10:9.95:0,10,53	0/0:12,0:12:15.04:0,15,166	0/0:12,0:12:15.04:0,15,166	0/0:3,0:11:9.49:0,9,48	0/0:2,0:5:8.52:0,9,43	0/0:9,0:15:17.37:0,17,110	1/1:2,28:30:53.91:627,54,0	0/0:24,1:25:28.48:0,28,491	0/0:19,0:19:48.51:0,49,483	0/0:13,0:18:25.38:0,25,149	0/0:12,0:12:24.06:0,24,261	0/0:9,0:9:15.04:0,15,166	0/0:25,0:26:44.95:0,45,478	0/0:1,0:8:8.21:0,8,38	0/0:4,0:4:2.99:0,3,25	0/1:2,0:7:0:0,0,0	0/0:9,0:10:2.83:0,3,14	./.	0/0:10,0:9:7.32:0,7,36	0/0:2,0:4:5.72:0,6,29
chr10	21404885	.	TAA	T	6706.56	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=7.170;DP=547;FS=0.386;HRun=13;HaplotypeScore=69.4195;InbreedingCoeff=0.9938;MQ=75.43;MQ0=0;MQRankSum=-2.825;QD=21.22;ReadPosRankSum=4.261;VQSLOD=4.5072;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:33:66.14:0,66,732	0/0:10,0:11:32.58:0,33,419	0/0:21,0:17:22.55:0,23,250	0/0:15,0:13:18.15:0,18,169	1/1:2,15:18:47.14:427,47,0	1/1:4,15:19:45.05:436,45,0	1/1:4,16:21:44.79:419,45,0	1/1:11,22:33:62.97:601,63,0	1/1:4,24:29:60.05:582,60,0	0/0:21,0:23:59.55:0,60,757	0/0:6,0:7:17.55:0,18,225	1/1:4,23:28:54:573,54,0	1/1:3,25:28:60.09:582,60,0	1/1:2,12:14:33.04:320,33,0	0/0:28,0:30:83.99:0,84,1132	0/0:20,0:23:58.66:0,59,763	0/0:20,0:25:64.66:0,65,831	1/1:1,18:20:47.81:448,48,0	0/0:13,0:15:35.59:0,36,452	0/0:8,0:8:24.08:0,24,346	0/0:17,0:17:45.15:0,45,651	1/1:0,9:9:24.02:229,24,0	1/1:5,7:12:18.47:175,18,0	1/1:7,20:29:36.36:458,36,0	1/1:0,6:6:18.03:174,18,0	1/1:3,24:27:72.04:688,72,0	1/1:1,15:16:42.05:407,42,0	1/1:0,6:7:20.77:186,21,0
chr10	21405185	.	TGC	T	34.62	PASS	AB=0.955;AC=8;AF=0.308;AN=26;BaseQRankSum=2.035;DP=93;FS=1.624;HRun=0;HaplotypeScore=26.2643;InbreedingCoeff=-0.0216;MQ=89.94;MQ0=10;MQRankSum=-0.735;QD=0.68;ReadPosRankSum=-0.975;VQSLOD=1.1675;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:6:2.90:0,3,108	./.	0/0:19,0:4:5.69:0,6,59	0/1:34,0:11:6.70:7,0,44	./.	./.	./.	1/1:1,1:1:3.01:39,3,0	./.	0/1:3,0:3:38.15:38,0,102	0/0:2,0:2:6.02:0,6,85	./.	./.	./.	1/1:1,0:1:2.96:19,3,0	0/0:3,0:3:3.48:0,3,50	0/1:7,2:9:15.22:15,0,244	./.	0/1:2,0:2:10.43:14,0,10	0/0:4,0:4:9.03:0,9,149	0/0:2,0:2:6.02:0,6,93	./.	./.	./.	0/0:0,2:2:2.04:0,2,6	./.	./.	./.
chr10	21405209	.	T	TCACACA	927.19	PASS	AC=10;AF=0.294;AN=34;BaseQRankSum=-2.677;DP=147;FS=3.115;HRun=0;HaplotypeScore=41.9163;InbreedingCoeff=0.6970;MQ=85.75;MQ0=5;MQRankSum=-3.276;QD=54.54;ReadPosRankSum=-1.542;VQSLOD=2.8320;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:18.06:0,18,390	0/0:4,0:4:6.02:0,6,132	0/0:18,0:6:6.43:0,6,89	0/0:24,0:12:2.66:0,3,26	./.	./.	1/1:0,1:1:3.01:101,3,0	1/1:4,4:8:18.06:605,18,0	./.	0/0:7,0:7:21.07:0,21,460	0/0:6,0:6:15.05:0,15,329	./.	./.	./.	0/0:10,0:10:15.04:0,15,288	0/0:4,0:5:9.03:0,9,197	0/0:12,0:12:33.11:0,33,722	1/1:2,1:2:6.02:200,6,0	0/0:9,0:9:27.08:0,27,527	0/0:5,0:5:12.04:0,12,263	0/0:5,0:5:12.01:0,12,218	./.	./.	./.	1/1:3,1:4:5.98:46,6,0	1/1:1,0:1:3.01:101,3,0	./.	./.
chr10	21405746	.	CACAG	C	44.85	PASS	AB=0.977;AC=8;AF=0.190;AN=42;BaseQRankSum=4.395;DP=1214;FS=11.488;HRun=0;HaplotypeScore=97.7212;InbreedingCoeff=0.2000;MQ=22.33;MQ0=268;MQRankSum=-4.201;QD=0.17;ReadPosRankSum=0.975;VQSLOD=1.2700;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:29:15.04:0,15,315	0/0:18,0:12:2.36:0,2,49	./.	./.	./.	0/1:34,1:17:0:0,0,0	0/0:60,0:19:0.47:0,0,1	0/1:55,0:12:14.11:14,0,117	0/1:47,0:27:0:0,0,0	0/0:79,0:28:41.16:0,41,923	0/0:23,0:11:9:0,9,95	0/0:45,0:25:2.46:0,2,18	0/1:33,1:21:1:14,0,1	0/1:44,1:25:14.73:15,0,29	0/0:57,1:35:18.05:0,18,340	0/0:49,1:26:4.96:0,5,183	0/0:68,1:49:57.56:0,58,1005	0/0:36,1:21:4.82:0,5,215	0/0:47,0:16:29.11:0,29,506	0/0:35,0:22:9.03:0,9,202	0/0:183,0:95:81.23:0,81,1675	0/0:37,0:22:3.01:0,3,39	./.	./.	./.	0/1:29,2:17:35.95:46,0,36	1/1:16,0:9:6.65:64,7,0	./.
chr10	21405748	.	CAG	C	102.53	PASS	AB=0.941;AC=12;AF=0.286;AN=42;BaseQRankSum=5.354;DP=1229;FS=19.932;HRun=0;HaplotypeScore=92.7651;InbreedingCoeff=0.2598;MQ=22.63;MQ0=269;MQRankSum=-4.417;QD=0.33;ReadPosRankSum=0.211;VQSLOD=0.3323;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:58,1:31:18.03:0,18,281	0/0:17,1:12:1.26:0,1,23	./.	./.	./.	1/1:30,5:17:0.33:0,0,0	0/0:56,5:20:0:0,0,0	0/1:54,0:10:43.60:44,0,137	1/1:44,3:27:0.94:2,1,0	0/0:79,1:29:41.46:0,41,789	0/0:23,0:11:9:0,9,88	0/1:42,3:25:10.46:10,0,35	1/1:30,4:21:5.38:22,5,0	0/1:40,4:24:6.68:7,0,41	0/0:56,1:35:18.02:0,18,248	0/0:53,1:30:8.50:0,9,194	0/0:69,1:50:53.23:0,53,880	0/0:37,1:22:7.55:0,8,217	0/0:45,0:16:29.65:0,30,461	0/0:36,1:23:9.03:0,9,167	0/0:188,1:99:86.80:0,87,1400	0/0:35,2:23:2.96:0,3,19	./.	./.	./.	0/1:28,3:17:29.46:77,0,29	1/1:15,2:9:11.29:60,11,0	./.
chr10	21405752	.	CACAG	C	170.61	PASS	AB=0.945;AC=10;AF=0.238;AN=42;BaseQRankSum=4.749;DP=1272;FS=31.813;HRun=0;HaplotypeScore=101.4614;InbreedingCoeff=0.2851;MQ=22.62;MQ0=282;MQRankSum=-4.250;QD=0.54;ReadPosRankSum=1.159;VQSLOD=0.3278;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:61,2:33:27.04:0,27,546	0/0:19,0:13:5.57:0,6,108	./.	./.	./.	0/1:33,3:18:0.02:0,0,0	0/0:64,1:21:0.47:0,0,1	0/1:59,1:9:9.63:51,0,10	0/1:46,2:27:0:0,0,0	0/0:80,0:28:58.75:0,59,1167	0/0:28,0:14:9.03:0,9,215	0/1:39,4:24:10.21:26,0,10	1/1:32,3:22:4.53:62,5,0	0/1:38,4:24:24.92:45,0,25	0/0:59,1:37:21.07:0,21,531	0/0:54,1:30:16.47:0,16,374	0/0:70,0:50:68.84:0,69,1438	0/0:38,0:21:9.14:0,9,228	0/0:46,0:16:26.92:0,27,534	0/0:38,0:24:9.03:0,9,242	0/0:200,1:101:93.79:0,94,2316	0/0:37,1:23:3.01:0,3,55	./.	./.	./.	0/1:30,1:15:11.25:11,0,71	1/1:17,1:9:10.94:96,11,0	./.
chr10	21405754	.	CAG	C	87.42	PASS	AB=0.947;AC=12;AF=0.286;AN=42;BaseQRankSum=5.173;DP=1302;FS=27.148;HRun=0;HaplotypeScore=95.2148;InbreedingCoeff=0.3326;MQ=22.57;MQ0=285;MQRankSum=-4.297;QD=0.23;ReadPosRankSum=0.970;VQSLOD=-0.1257;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:64,0:33:27.04:0,27,451	0/0:18,2:13:3.63:0,4,82	./.	./.	./.	0/1:36,0:18:0.14:0,0,0	1/1:60,7:21:1.25:3,1,0	0/1:59,1:8:10.53:13,0,11	0/1:44,4:26:0.02:0,0,0	0/0:83,1:28:19.68:0,20,880	0/0:29,0:15:9.03:0,9,173	0/1:39,5:24:5.31:11,0,5	1/1:32,3:22:8.48:49,8,0	0/1:42,3:25:7.84:26,0,8	0/0:62,0:39:24.06:0,24,425	0/0:58,1:33:17.55:0,18,294	0/0:71,0:50:63.75:0,64,1070	0/0:40,0:22:6.05:0,6,186	0/0:47,0:15:29.68:0,30,419	0/0:36,2:25:9.03:0,9,173	0/0:202,8:105:93.79:0,94,1760	0/0:35,3:23:3.01:0,3,51	./.	./.	./.	0/1:29,2:15:31.39:31,0,53	1/1:16,2:9:7.85:77,8,0	./.
chr10	21405756	.	G	GAC	44.25	PASS	AB=0.979;AC=9;AF=0.214;AN=42;BaseQRankSum=5.615;DP=1323;FS=16.065;HRun=0;HaplotypeScore=97.8705;InbreedingCoeff=0.1813;MQ=22.40;MQ0=298;MQRankSum=-4.478;QD=0.17;ReadPosRankSum=0.678;VQSLOD=0.7666;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:65,0:33:27.03:0,27,334	0/0:22,0:14:7.22:0,7,71	./.	./.	./.	1/1:35,1:18:0.33:1,0,0	0/0:71,0:23:5:0,5,26	0/1:53,0:5:15.63:26,0,16	0/0:46,2:25:0:0,0,0	0/0:86,1:30:21.60:0,22,673	0/0:32,0:17:9.03:0,9,120	0/1:44,2:24:17.84:27,0,18	1/1:35,0:23:9.61:60,10,0	0/1:40,3:23:4.13:4,0,19	0/0:63,0:39:24.08:0,24,319	0/0:58,2:34:16.39:0,16,203	0/0:70,0:49:64.20:0,64,762	0/0:38,0:21:11.64:0,12,121	0/0:48,0:14:16.99:0,17,274	0/0:39,0:25:9.03:0,9,119	0/0:207,0:104:93.28:0,93,1234	0/0:39,0:23:3.01:0,3,40	./.	./.	./.	0/1:33,0:15:2.95:3,0,41	0/1:18,0:9:8.72:35,0,9	./.
chr10	21405774	.	CAG	C	84.05	PASS	AB=0.977;AC=11;AF=0.239;AN=46;BaseQRankSum=5.724;DP=1608;DS;FS=27.622;HRun=0;HaplotypeScore=114.8227;InbreedingCoeff=0.0958;MQ=21.93;MQ0=396;MQRankSum=-5.169;QD=0.25;ReadPosRankSum=-4.066;VQSLOD=-0.5731;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:80,0:35:27.41:0,27,474	0/0:28,0:17:5.90:0,6,86	./.	./.	./.	1/1:43,1:20:2.66:13,3,0	0/0:97,2:33:3.01:0,3,36	0/0:73,0:3:2.76:0,3,20	1/1:53,1:27:1.25:3,1,0	0/0:111,0:35:7.25:0,7,665	0/0:36,0:18:9.03:0,9,173	0/1:58,1:30:9.69:18,0,10	0/1:47,1:29:36.30:36,0,36	0/1:46,2:26:11.18:21,0,11	0/0:73,0:42:24.02:0,24,454	0/0:63,2:38:16.77:0,17,283	0/0:83,1:54:9.66:0,10,983	0/0:42,0:22:18.08:0,18,162	0/0:43,0:12:20.46:0,20,246	0/0:48,0:31:5.83:0,6,113	0/0:248,2:128:86.67:0,87,2048	0/0:44,2:29:2.96:0,3,19	./.	./.	0/0:30,1:19:2.90:0,3,16	0/1:51,1:19:35.62:49,0,36	0/1:24,0:12:16.49:48,0,16	1/1:12,0:6:2.96:19,3,0
chr10	21405794	.	CAG	C	192.78	PASS	AB=0.994;AC=11;AF=0.220;AN=50;BaseQRankSum=6.049;DP=1934;DS;FS=35.584;HRun=0;HaplotypeScore=149.0482;InbreedingCoeff=0.0391;MQ=21.49;MQ0=494;MQRankSum=-5.906;QD=0.38;ReadPosRankSum=-2.794;VQSLOD=0.5252;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:95,0:42:30.52:0,31,471	0/1:28,1:17:48.89:49,0,109	./.	./.	1/1:38,0:21:0.79:2,1,0	1/1:54,1:27:2.81:17,3,0	0/0:108,3:36:2.90:0,3,16	0/0:109,0:6:1.50:0,1,146	0/0:66,0:32:10.37:0,10,71	0/1:123,1:37:22.75:23,0,436	0/0:47,1:28:12.01:0,12,145	0/1:84,0:42:17.27:35,0,17	0/1:63,0:32:71.63:80,0,72	0/0:67,0:40:7.07:0,7,34	0/0:89,1:53:29.55:0,30,440	0/0:72,0:43:11.55:0,12,201	0/0:97,1:64:28.90:0,29,906	0/0:54,1:28:3.92:0,4,235	0/0:59,0:15:18.94:0,19,269	0/0:61,0:39:8.78:0,9,94	0/0:248,2:128:99:0,115,1838	./.	0/0:50,0:33:1.25:0,1,3	0/0:102,0:50:0:0,0,0	0/0:36,1:23:8.89:0,9,60	0/1:73,0:23:29.73:30,0,102	0/1:29,0:14:12.73:45,0,13	0/1:15,0:9:2.04:40,0,2
chr10	21405806	.	CAG	C	315.20	PASS	AB=0.985;AC=16;AF=0.308;AN=52;BaseQRankSum=3.130;DP=1983;DS;FS=3.791;HRun=0;HaplotypeScore=172.4466;InbreedingCoeff=-0.0175;MQ=21.60;MQ0=519;MQRankSum=-4.811;QD=0.34;ReadPosRankSum=-1.509;VQSLOD=2.5869;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:95,1:42:21.92:0,22,325	0/1:32,0:17:17.07:17,0,105	./.	./.	1/1:42,0:21:0.79:2,1,0	0/1:56,1:31:0:0,0,0	1/1:113,0:40:3.52:18,4,0	0/0:110,0:6:4.98:0,5,112	0/1:64,0:32:15.93:16,0,153	0/0:131,0:39:1.88:0,2,709	0/0:45,0:29:16.22:0,16,200	0/1:82,0:37:12.33:12,0,38	0/1:69,0:36:95.73:96,0,131	0/0:64,4:41:9.16:0,9,72	0/0:94,1:51:5.86:0,6,300	0/1:73,1:45:51.48:51,0,168	0/1:102,3:69:99:143,0,723	0/0:53,1:26:9.44:0,9,225	0/0:65,0:15:26.57:0,27,330	0/0:59,1:37:5.67:0,6,76	0/0:247,0:130:72.53:0,73,1438	0/1:51,1:29:0:0,0,0	0/0:51,3:37:1.24:0,1,3	0/1:98,2:50:0:0,0,0	0/0:38,2:23:9.01:0,9,107	0/1:76,0:26:16.93:17,0,299	0/1:31,1:14:41.21:41,0,66	0/1:16,1:9:0.19:31,0,0
chr10	21405816	.	C	CAG	146.40	PASS	AB=0.984;AC=10;AF=0.192;AN=52;BaseQRankSum=3.490;DP=1979;DS;FS=11.469;HRun=0;HaplotypeScore=178.1979;InbreedingCoeff=0.1404;MQ=21.38;MQ0=529;MQRankSum=-4.755;QD=0.31;ReadPosRankSum=1.146;VQSLOD=2.2926;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:96,1:41:24.66:0,25,274	0/0:30,0:15:21.99:0,22,193	./.	./.	0/0:41,1:21:3.28:0,3,9	0/0:53,1:31:0:0,0,0	0/0:124,1:41:0.79:0,1,2	0/1:123,0:4:8.11:8,0,46	0/0:66,1:33:17.67:0,18,187	0/0:128,1:36:25.67:0,26,861	0/0:45,0:29:16.30:0,16,229	0/1:80,1:36:2.31:2,0,52	0/0:67,0:35:4.52:0,5,250	0/1:68,0:42:12.67:13,0,47	0/0:92,0:50:29.67:0,30,352	0/0:78,1:49:31.27:0,31,290	0/0:97,0:64:52.67:0,53,854	0/1:46,2:22:99:130,0,180	0/1:62,0:15:30.64:31,0,264	0/0:59,0:34:5.94:0,6,91	0/0:249,1:130:99:0,111,1358	0/0:51,0:27:1.54:0,2,4	1/1:47,1:33:0.88:2,1,0	0/0:93,1:47:0:0,0,1	0/0:41,1:24:7.59:0,8,98	0/0:78,0:25:29.96:0,30,330	0/1:32,1:15:61.46:61,0,93	1/1:16,0:8:4.82:18,5,0
chr10	21405824	.	C	CAG	126.70	PASS	AB=0.969;AC=5;AF=0.096;AN=52;BaseQRankSum=2.661;DP=1901;DS;FS=3.593;HRun=0;HaplotypeScore=184.9820;InbreedingCoeff=0.2190;MQ=21.80;MQ0=500;MQRankSum=-2.540;QD=0.82;ReadPosRankSum=1.142;VQSLOD=2.6690;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:94,0:45:31.80:0,32,331	0/0:30,0:16:18.41:0,18,162	./.	./.	0/0:41,0:21:0.47:0,0,1	0/0:48,1:29:0:0,0,0	0/0:133,0:42:2.54:0,3,16	0/0:114,0:4:8.17:0,8,49	0/0:63,0:30:17.87:0,18,195	0/0:121,0:38:70.58:0,71,969	0/0:40,0:27:15.04:0,15,227	0/0:79,2:39:5.27:0,5,106	0/0:63,0:35:26.87:0,27,309	0/1:67,2:40:47.91:48,0,78	0/0:82,5:45:21.51:0,22,285	0/0:77,0:46:33.39:0,33,304	0/0:95,3:62:1.54:0,2,756	0/1:40,3:21:99:157,0,200	0/0:48,0:14:8.19:0,8,266	0/0:53,0:31:5.94:0,6,91	0/0:242,0:132:99:0,117,1408	0/0:50,0:29:3.68:0,4,9	0/0:48,0:34:0:0,0,0	0/0:88,3:48:0:0,0,1	0/0:43,0:26:7.59:0,8,107	0/0:79,0:25:35.76:0,36,436	0/1:31,0:15:9.89:10,0,98	1/1:11,0:5:2.80:13,3,0
chr10	21405826	.	CAG	C	129.78	PASS	AB=0.980;AC=18;AF=0.360;AN=50;BaseQRankSum=3.463;DP=1878;DS;FS=4.087;HRun=0;HaplotypeScore=180.1570;InbreedingCoeff=-0.0082;MQ=21.84;MQ0=493;MQRankSum=-2.956;QD=0.13;ReadPosRankSum=-4.241;VQSLOD=1.3711;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:93,1:45:11.35:11,0,237	0/1:29,0:16:16.16:16,0,52	./.	./.	1/1:39,0:19:0.89:2,1,0	0/1:45,3:28:0:0,0,0	1/1:132,1:43:2.70:25,3,0	./.	0/1:58,3:29:38.59:39,0,146	0/1:121,0:39:41.60:42,0,758	0/0:40,0:27:13.76:0,14,156	0/1:80,2:39:11.85:12,0,101	0/1:63,0:36:17.24:17,0,205	0/0:64,5:40:7.53:0,8,69	0/1:85,0:44:1.59:2,0,209	0/0:75,0:47:12.49:0,12,212	0/0:96,0:61:14.12:0,14,630	0/1:41,1:22:0.47:0,0,247	0/0:49,0:13:23.87:0,24,353	0/0:49,0:30:5.72:0,6,107	0/0:239,0:132:83.96:0,84,1250	0/0:46,2:28:3.56:0,4,9	0/1:46,1:33:0:0,0,0	0/1:89,0:48:0:1,0,0	0/0:45,0:28:12.02:0,12,191	0/0:76,0:25:1.21:0,1,437	0/1:29,2:15:36.10:76,0,36	1/1:10,1:5:2.74:12,3,0
chr10	21405838	.	CAG	C	260.46	PASS	AB=0.986;AC=21;AF=0.420;AN=50;BaseQRankSum=6.999;DP=1705;DS;FS=9.885;HRun=0;HaplotypeScore=168.2352;InbreedingCoeff=0.1417;MQ=21.74;MQ0=451;MQRankSum=-4.362;QD=0.28;ReadPosRankSum=-5.207;VQSLOD=-0.1196;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:88,0:44:2.18:2,0,330	0/1:27,0:14:9.37:23,0,9	./.	./.	1/1:31,2:14:0.47:1,0,0	0/1:41,1:27:0:0,0,0	1/1:115,0:36:2.76:24,3,0	./.	0/1:51,0:28:37.39:37,0,153	0/0:102,0:34:58.31:0,58,1027	0/0:38,0:25:8.31:0,8,143	0/1:80,0:38:21.07:21,0,137	0/1:58,2:33:45.79:46,0,278	0/0:64,3:41:6.17:0,6,81	0/1:80,0:40:10.12:10,0,162	0/1:64,0:40:25.95:26,0,306	0/1:79,1:48:77.20:77,0,808	0/0:41,1:23:19.71:0,20,459	0/0:55,0:14:26.68:0,27,430	0/0:44,0:25:5.83:0,6,115	0/0:214,4:124:99:0,104,1623	1/1:44,2:24:9.10:46,9,0	0/1:44,2:32:0:0,0,0	0/1:74,1:38:0:1,0,0	0/0:38,2:25:12.02:0,12,199	0/0:72,0:27:36.08:0,36,600	1/1:27,1:12:9.08:64,9,0	1/1:10,1:6:4.23:25,4,0
chr10	21405840	.	GAC	G	81.16	PASS	AB=0.985;AC=10;AF=0.217;AN=46;BaseQRankSum=4.159;DP=1682;DS;FS=10.799;HRun=0;HaplotypeScore=167.5027;InbreedingCoeff=0.1338;MQ=21.75;MQ0=442;MQRankSum=-4.520;QD=0.15;ReadPosRankSum=-1.357;VQSLOD=2.1970;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:86,1:46:26.84:0,27,391	0/0:26,0:14:5.32:0,5,42	./.	./.	./.	0/1:41,0:27:0:0,0,0	1/1:111,0:37:2.17:7,2,0	./.	0/1:53,0:29:9.34:9,0,149	0/0:98,1:32:54.31:0,54,1043	0/0:38,0:25:12.01:0,12,184	0/1:78,3:38:28.56:29,0,149	0/1:59,2:34:40.94:41,0,265	0/0:66,1:41:10.21:0,10,133	0/0:77,0:38:10.75:0,11,158	0/0:65,0:40:33.27:0,33,430	0/1:74,4:47:84.81:85,0,860	0/0:41,0:23:25.34:0,25,490	0/0:56,0:14:27.09:0,27,436	0/0:44,0:25:8.73:0,9,124	0/0:212,0:121:99:0,102,1693	0/0:43,0:23:3.68:0,4,9	./.	0/1:75,0:38:0:0,0,0	0/0:33,0:23:12.02:0,12,196	0/0:71,0:26:36.12:0,36,608	0/1:26,0:11:9.06:21,0,9	0/1:12,0:6:0:0,0,0
chr10	21405844	.	CAG	C	60.27	PASS	AB=0.979;AC=14;AF=0.280;AN=50;BaseQRankSum=5.692;DP=1685;DS;FS=9.951;HRun=0;HaplotypeScore=167.1461;InbreedingCoeff=0.0548;MQ=21.60;MQ0=434;MQRankSum=-5.144;QD=0.09;ReadPosRankSum=-4.382;VQSLOD=0.4281;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:85,0:46:33.09:0,33,499	0/1:25,0:13:10.57:22,0,11	./.	./.	1/1:32,0:15:0.47:1,0,0	0/1:39,1:28:0:0,0,0	1/1:111,0:35:2.12:8,2,0	./.	0/1:54,1:29:18.50:19,0,124	0/0:99,1:30:14.57:0,15,948	0/0:34,2:23:14.14:0,14,233	0/1:74,2:37:11.43:11,0,144	0/1:55,1:31:23.16:23,0,199	0/0:67,2:41:8.22:0,8,142	0/0:73,1:37:9.82:0,10,113	0/0:63,0:40:35.52:0,36,490	0/1:81,0:48:22.68:23,0,820	0/1:44,0:26:3.25:3,0,430	0/0:55,0:12:27.07:0,27,385	0/0:44,0:25:5.92:0,6,60	0/0:217,1:123:99:0,107,1787	0/0:43,0:23:8.23:0,8,52	0/1:45,1:30:0:0,0,0	0/1:74,3:39:0:1,0,0	0/0:34,0:21:11.96:0,12,148	0/0:69,0:26:35.91:0,36,608	0/1:26,2:12:54.16:69,0,54	0/0:12,0:7:2.63:0,3,17
chr10	21405846	.	G	GAC	868.91	PASS	AB=0.953;AC=18;AF=0.375;AN=48;BaseQRankSum=4.831;DP=1699;DS;FS=18.298;HRun=0;HaplotypeScore=165.3066;InbreedingCoeff=-0.1971;MQ=21.65;MQ0=438;MQRankSum=-3.791;QD=1.03;ReadPosRankSum=0.389;VQSLOD=1.8219;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:82,4:45:29.79:30,0,311	1/1:25,1:14:6.89:65,7,0	./.	./.	0/1:31,0:15:0:0,0,0	0/0:38,2:28:0:0,0,0	0/0:108,0:34:0.47:0,0,1	./.	0/0:58,0:30:1.89:0,2,42	0/1:97,2:30:88.87:89,0,495	0/1:33,2:22:20.73:21,0,128	0/1:73,3:38:65.82:66,0,73	0/1:52,5:31:85.86:115,0,86	0/0:66,2:41:11.54:0,12,102	0/0:74,0:36:6.02:0,6,72	0/1:59,4:40:33.54:34,0,262	0/1:73,8:48:99:102,0,516	0/1:41,4:27:99:130,0,202	0/1:57,3:14:99:127,0,152	1/1:41,1:23:4.57:55,5,0	0/0:216,3:124:92.65:0,93,1099	1/1:34,6:22:9.02:99,9,0	0/0:44,1:29:1.25:0,1,3	./.	0/0:32,2:21:3.01:0,3,34	0/1:68,1:25:33.62:34,0,328	0/1:27,1:12:38.63:39,0,49	0/0:14,0:9:3.01:0,3,35
chr10	21405946	.	CAG	C	135.37	PASS	AB=0.990;AC=19;AF=0.413;AN=46;BaseQRankSum=6.833;DP=1205;DS;FS=0.831;HRun=0;HaplotypeScore=87.4794;InbreedingCoeff=0.1341;MQ=23.42;MQ0=321;MQRankSum=-4.114;QD=0.25;ReadPosRankSum=-2.047;VQSLOD=1.0730;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:59,0:30:15.01:0,15,219	1/1:11,0:5:2.88:15,3,0	./.	./.	./.	0/1:28,0:14:0:0,0,0	./.	0/1:136,0:8:7.71:8,0,46	0/1:37,0:18:6.22:6,0,15	0/1:60,0:24:2.10:2,0,366	0/0:13,0:9:8.96:0,9,116	1/1:41,0:18:2.92:17,3,0	0/1:35,2:19:65.72:66,0,66	0/1:30,0:13:0:0,0,0	0/0:52,0:33:40.75:0,41,620	0/0:50,0:36:25.84:0,26,491	0/0:57,0:38:46.58:0,47,785	0/1:36,0:14:0.06:0,0,0	0/0:56,0:15:12.43:0,12,351	0/1:21,0:11:10.95:11,0,116	0/0:212,2:101:41.58:0,42,865	1/1:21,1:17:5.03:29,5,0	./.	0/0:69,0:31:0:0,0,0	1/1:24,0:17:3:25,3,0	0/1:36,0:13:3.39:3,0,116	0/1:16,0:11:8.11:8,0,66	0/1:14,1:12:10.30:71,0,10
chr10	21406008	.	CAG	C	94.92	PASS	AB=0.997;AC=11;AF=0.212;AN=52;BaseQRankSum=6.399;DP=1440;DS;FS=11.279;HRun=0;HaplotypeScore=137.9728;InbreedingCoeff=0.0220;MQ=22.43;MQ0=364;MQRankSum=-5.674;QD=0.19;ReadPosRankSum=-3.018;VQSLOD=1.1728;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:70,1:39:22.56:0,23,331	0/0:13,0:8:3.01:0,3,53	./.	./.	0/0:33,0:15:0:0,0,0	0/1:33,0:16:0.18:0,0,0	0/0:71,1:32:4.96:0,5,30	0/1:77,0:12:22.77:23,0,98	1/1:57,1:28:2.49:16,2,0	0/0:66,0:23:5.45:0,5,340	0/0:31,1:17:15.05:0,15,288	0/1:60,0:28:31.82:32,0,68	0/0:49,0:25:1.87:0,2,116	0/0:55,2:29:6.41:0,6,68	0/0:66,1:35:22.75:0,23,283	0/1:56,0:31:23.76:24,0,243	0/1:64,0:36:32.58:33,0,263	0/1:39,0:17:2.44:2,0,28	0/0:66,0:16:25.04:0,25,435	0/0:37,0:21:33.58:0,34,607	0/0:187,1:91:67.12:0,67,1166	0/1:38,1:24:0.01:0,0,0	0/0:46,1:34:0.47:0,0,1	0/0:85,0:36:0.39:0,0,1	0/0:48,0:37:2.81:0,3,16	0/1:44,0:19:34.08:71,0,34	0/0:17,0:7:10.15:0,10,78	0/1:22,0:16:12.78:13,0,13
chr10	21406010	.	GAC	G	70.12	PASS	AB=0.960;AC=9;AF=0.173;AN=52;BaseQRankSum=3.842;DP=1486;DS;FS=7.149;HRun=0;HaplotypeScore=143.9767;InbreedingCoeff=0.1304;MQ=22.38;MQ0=373;MQRankSum=-3.854;QD=0.16;ReadPosRankSum=-1.559;VQSLOD=2.1559;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:70,2:40:19.56:0,20,268	0/0:15,0:9:5.98:0,6,69	./.	./.	0/0:36,0:18:0:0,0,0	0/1:33,0:16:0.18:0,0,0	0/0:82,2:37:2.64:0,3,34	0/0:83,0:13:25.84:0,26,186	1/1:57,1:28:2.59:33,3,0	0/1:60,3:21:28.63:29,0,298	0/0:31,1:17:15.05:0,15,245	0/0:59,3:30:5.27:0,5,96	0/0:51,0:26:12.57:0,13,137	0/0:58,0:29:5.69:0,6,70	0/0:71,0:37:12.23:0,12,154	0/1:54,2:32:7.44:7,0,260	0/1:59,5:35:35.92:36,0,292	0/0:40,0:17:11.46:0,11,92	0/0:67,0:15:28.58:0,29,331	0/0:39,0:22:36:0,36,535	0/0:187,0:91:60.43:0,60,844	0/0:41,0:24:0:0,0,0	0/0:47,0:34:0.47:0,0,1	0/1:77,8:37:0:0,0,0	0/0:52,0:41:3:0,3,33	0/1:45,0:20:43.63:44,0,97	0/0:19,0:8:15.39:0,15,122	0/1:23,1:18:23.42:35,0,23
chr10	21406022	.	CAG	C	350.21	PASS	AB=0.981;AC=14;AF=0.269;AN=52;BaseQRankSum=4.142;DP=1577;DS;FS=6.553;HRun=0;HaplotypeScore=157.1529;InbreedingCoeff=-0.1182;MQ=22.28;MQ0=406;MQRankSum=-3.917;QD=0.46;ReadPosRankSum=-2.108;VQSLOD=1.6841;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:77,0:44:17.98:0,18,260	0/0:16,0:9:2.42:0,2,39	./.	./.	0/0:35,2:18:0:0,0,0	0/1:32,0:16:0.18:0,0,0	0/0:96,2:38:5.52:0,6,65	0/1:111,0:19:44.72:45,0,52	1/1:55,1:27:8.17:44,8,0	0/1:73,1:22:25.63:26,0,172	0/0:34,0:18:15.05:0,15,269	0/1:65,1:34:17.32:17,0,59	0/1:52,2:26:12.60:13,0,119	0/0:57,3:31:8.97:0,9,55	0/1:71,0:36:20.34:20,0,48	0/1:60,1:34:57.80:58,0,291	0/1:65,0:37:28.05:28,0,292	0/1:41,0:18:3.57:4,0,53	0/1:57,1:17:4.61:5,0,224	0/0:42,0:25:33.87:0,34,516	0/0:182,3:88:18.09:0,18,602	0/0:47,0:25:2.80:0,3,14	0/0:45,4:34:0.94:0,1,2	0/0:84,0:38:0.37:0,0,1	0/0:52,5:43:2.86:0,3,20	0/1:50,3:22:99:147,0,112	0/0:21,1:12:21.30:0,21,125	0/1:23,2:20:6.09:77,0,6
chr10	21406024	.	GAC	G	42.32	PASS	AB=0.982;AC=9;AF=0.173;AN=52;BaseQRankSum=3.082;DP=1597;FS=6.809;HRun=0;HaplotypeScore=162.2933;InbreedingCoeff=0.1191;MQ=22.14;MQ0=415;MQRankSum=-3.514;QD=0.07;ReadPosRankSum=0.174;VQSLOD=1.7851;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:75,1:43:16.07:0,16,167	0/0:17,0:10:6.83:0,7,44	./.	./.	0/0:38,0:17:0:0,0,0	0/1:33,0:16:0.18:0,0,0	0/0:101,0:40:5.65:0,6,65	0/0:114,0:19:17.97:0,18,163	0/0:55,0:26:2.65:0,3,7	0/1:75,1:22:46.80:47,0,127	0/0:32,2:17:14.97:0,15,202	0/1:67,1:34:4.87:5,0,48	0/0:54,1:27:12.20:0,12,117	0/0:59,2:31:6.92:0,7,56	1/1:71,0:38:0.82:31,1,0	0/0:60,1:34:33.31:0,33,343	0/0:58,3:33:15.13:0,15,260	0/0:40,2:18:3.22:0,3,67	0/0:56,0:18:19.48:0,19,182	0/0:41,0:25:28.89:0,29,390	0/1:181,5:87:1.37:1,0,348	0/0:47,0:25:2.84:0,3,14	0/0:50,0:35:0.94:0,1,1	0/1:82,3:39:0:0,0,0	0/0:57,1:44:2.99:0,3,23	0/1:56,0:24:32.83:33,0,148	0/0:24,0:13:16.38:0,16,180	0/1:24,1:20:29.77:31,0,30
chr10	21406051	.	A	ACGCG	116.50	PASS	AB=0.991;AC=11;AF=0.212;AN=52;BaseQRankSum=4.542;DP=1637;FS=21.372;HRun=0;HaplotypeScore=223.4339;InbreedingCoeff=-0.0004;MQ=23.31;MQ0=384;MQRankSum=-5.152;QD=0.20;ReadPosRankSum=2.945;VQSLOD=1.4012;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:78,0:49:31.89:0,32,460	0/0:20,0:12:15.03:0,15,203	./.	./.	0/0:41,1:21:1.82:0,2,5	0/0:34,0:21:0.04:0,0,1	0/0:99,0:45:15.47:0,15,132	0/1:143,0:28:2.64:3,0,337	1/1:58,0:30:3.22:11,3,0	0/0:75,0:34:80.90:0,81,1189	0/0:35,0:18:18.04:0,18,297	0/1:69,0:38:4.20:4,0,142	0/1:63,0:33:10.84:11,0,189	0/1:57,0:28:13.38:13,0,32	0/0:68,0:35:24.99:0,25,371	0/0:60,0:36:54.34:0,54,790	0/0:61,0:38:46.98:0,47,686	0/1:39,1:17:72.48:72,0,117	0/0:54,0:24:40.96:0,41,715	0/0:48,0:32:33.01:0,33,561	0/0:170,0:80:62.69:0,63,928	0/1:53,0:31:0:0,0,1	0/0:57,1:41:3.26:0,3,45	0/0:87,0:45:1.53:0,2,4	0/0:59,0:46:3.01:0,3,53	0/1:57,1:32:41.71:42,0,534	0/1:22,1:14:24.22:24,0,153	0/1:25,0:21:59.12:59,0,61
chr10	21406864	.	GA	G	3057.71	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=8.397;DP=656;FS=3.628;HRun=10;HaplotypeScore=81.2466;InbreedingCoeff=0.9691;MQ=83.92;MQ0=1;MQRankSum=0.298;QD=17.28;ReadPosRankSum=3.445;VQSLOD=4.4088;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,1:33:67.19:0,67,934	1/1:0,15:15:38.99:338,39,0	0/0:40,1:31:46.43:0,46,407	0/0:34,0:28:32.62:0,33,252	0/0:27,0:29:48.57:0,49,611	0/0:22,0:22:66.15:0,66,719	0/0:19,0:19:51.12:0,51,555	0/0:23,0:23:54.14:0,54,591	0/0:16,0:16:27.74:0,28,441	1/1:6,11:17:32.05:281,32,0	1/1:2,12:14:13.07:263,13,0	0/0:30,1:31:55.01:0,55,793	0/0:26,0:26:78.17:0,78,835	0/0:26,0:26:63.15:0,63,681	0/0:22,0:22:57.11:0,57,604	1/1:2,15:17:35.97:312,36,0	1/1:2,37:39:83.98:728,84,0	0/0:14,0:14:33.05:0,33,346	1/1:7,17:24:35.23:383,35,0	1/1:3,18:22:14.73:421,15,0	1/1:4,24:29:53.17:537,53,0	0/0:13,0:13:23.12:0,23,293	0/0:25,0:25:57.07:0,57,577	0/0:21,3:24:8.06:0,8,518	0/0:21,2:23:11.01:0,11,526	0/0:31,2:33:56.41:0,56,873	0/0:21,0:21:48.13:0,48,530	0/0:4,0:4:12.03:0,12,133
chr10	21407130	.	TG	T	4471.94	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=12.142;DP=563;FS=3.868;HRun=3;HaplotypeScore=58.1525;InbreedingCoeff=0.9988;MQ=93.23;MQ0=0;MQRankSum=-2.041;QD=33.37;ReadPosRankSum=1.489;VQSLOD=5.3988;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:81.27:0,81,1163	1/1:1,12:13:33.10:409,33,0	0/0:30,0:30:78.23:0,78,1070	0/0:18,0:18:54.18:0,54,744	0/0:24,0:24:72.24:0,72,1027	0/0:21,0:21:60.20:0,60,862	0/0:20,0:20:57.19:0,57,821	0/0:31,0:31:87.28:0,87,1222	0/0:24,0:24:69.23:0,69,993	1/1:0,20:20:60.19:737,60,0	1/1:1,8:9:24.07:291,24,0	0/0:30,0:30:87.29:0,87,1243	0/0:20,0:20:60.20:0,60,863	0/0:32,0:32:90.30:0,90,1294	0/0:30,0:30:90.26:0,90,1242	1/1:1,21:22:60.19:744,60,0	1/1:0,15:15:42.13:521,42,0	0/0:17,0:17:48.16:0,48,691	1/1:4,21:25:63.18:767,63,0	1/1:0,11:11:33.10:409,33,0	1/1:2,17:19:48.15:595,48,0	0/0:15,0:15:29.99:0,30,547	0/0:12,0:12:36.12:0,36,517	0/0:15,0:15:45.11:0,45,625	0/0:12,0:12:36.12:0,36,516	0/0:21,0:21:63.21:0,63,906	0/0:20,0:20:60.20:0,60,863	0/0:7,0:7:21.07:0,21,302
chr10	21408295	.	GT	G	4192.25	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=14.384;DP=645;FS=0.000;HRun=9;HaplotypeScore=60.5460;InbreedingCoeff=0.9928;MQ=70.58;MQ0=0;MQRankSum=-1.509;QD=23.16;ReadPosRankSum=1.776;VQSLOD=4.4620;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:87.25:0,87,994	1/1:1,8:9:24.01:220,24,0	0/0:9,0:8:20.65:0,21,215	0/0:8,0:8:14.42:0,14,127	0/0:41,0:42:99:0,120,1365	0/0:39,0:39:99:0,105,1212	0/0:17,0:17:39.12:0,39,450	0/0:29,0:29:66.17:0,66,744	0/0:20,0:20:48.14:0,48,554	1/1:1,23:24:69.04:632,69,0	1/1:3,21:24:60.03:549,60,0	0/0:18,0:18:48.14:0,48,554	0/0:16,0:16:48.11:0,48,533	0/0:14,0:14:42.10:0,42,466	0/0:25,0:25:66.20:0,66,762	1/1:1,19:20:53.72:494,54,0	1/1:4,27:31:72.03:659,72,0	0/0:20,0:20:54.16:0,54,623	1/1:3,19:22:57:513,57,0	1/1:5,28:33:81.03:741,81,0	1/1:1,17:18:42.02:384,42,0	0/0:28,0:28:75.20:0,75,841	0/0:30,0:30:81.24:0,81,935	0/0:16,0:16:42.12:0,42,485	0/0:31,1:32:56.78:0,57,907	0/0:26,2:28:23.56:0,24,776	0/0:36,0:36:90.20:0,90,998	0/0:6,0:6:15.04:0,15,173
chr10	21408421	.	T	TC	7065.04	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-15.413;DP=672;FS=2.891;HRun=3;HaplotypeScore=62.7658;InbreedingCoeff=0.9995;MQ=87.87;MQ0=0;MQRankSum=-2.844;QD=37.78;ReadPosRankSum=1.821;VQSLOD=5.4129;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,141,1692	1/1:1,9:10:24.08:336,24,0	0/0:31,0:31:78.63:0,79,886	0/0:15,0:15:45.10:0,45,514	0/0:31,0:31:81.25:0,81,972	0/0:17,0:17:51.16:0,51,612	0/0:24,0:24:69.21:0,69,828	0/0:29,0:29:81.22:0,81,944	0/0:23,0:23:63.19:0,63,756	1/1:3,34:37:99:1410,102,0	1/1:1,15:16:45.15:630,45,0	0/0:24,0:24:72.21:0,72,853	0/0:26,0:26:72.22:0,72,864	0/0:28,0:28:84.24:0,84,996	0/0:29,0:29:84.24:0,84,989	1/1:1,34:35:99:1429,102,0	1/1:2,25:27:69.23:966,69,0	0/0:12,0:12:33.10:0,33,396	1/1:3,15:18:45.14:614,45,0	1/1:1,22:23:63.21:882,63,0	1/1:1,20:21:57.19:798,57,0	0/0:28,0:28:84.26:0,84,1008	0/0:16,0:16:45.14:0,45,539	0/0:15,0:15:42.13:0,42,504	0/0:17,0:17:48.15:0,48,576	0/0:29,1:30:45.70:0,46,958	0/0:31,0:31:90.28:0,90,1079	0/0:10,0:10:30.09:0,30,360
chr10	21409078	.	C	CT	7289.20	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-13.124;DP=673;FS=0.330;HRun=0;HaplotypeScore=60.3224;InbreedingCoeff=0.9968;MQ=86.50;MQ0=0;MQRankSum=-0.761;QD=41.89;ReadPosRankSum=1.905;VQSLOD=5.4448;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,102,1415	1/1:0,9:9:27.09:431,27,0	0/0:27,0:27:68.39:0,68,853	0/0:21,0:20:14.62:0,15,597	0/0:44,0:44:99:0,129,1797	0/0:32,0:31:90.30:0,90,1251	0/0:21,0:21:63.18:0,63,851	0/0:18,0:18:42.08:0,42,531	0/0:19,0:19:54.17:0,54,732	1/1:1,22:23:66.19:986,66,0	1/1:0,32:32:90.30:1394,90,0	0/0:17,0:17:51.15:0,51,678	0/0:33,0:33:96.27:0,96,1290	0/0:22,0:22:66.17:0,66,897	0/0:23,0:23:66.13:0,66,878	1/1:0,24:24:69.24:1102,69,0	1/1:1,36:37:93.32:1484,93,0	0/0:14,0:14:39.13:0,39,541	1/1:0,11:11:33.09:469,33,0	1/1:0,24:24:57.19:897,57,0	1/1:0,14:14:33.11:527,33,0	0/0:23,0:23:66.19:0,66,896	0/0:16,0:16:45.08:0,45,594	0/0:19,0:19:54.18:0,54,753	0/0:17,0:17:51.13:0,51,675	0/0:37,0:37:99:0,105,1420	0/0:44,0:44:99:0,129,1695	0/0:13,0:13:39.13:0,39,543
chr10	21409451	.	G	GA	8917.15	PASS	AB=0.704;AC=32;AF=0.571;AN=56;BaseQRankSum=-13.864;DP=621;FS=18.662;HRun=9;HaplotypeScore=58.5702;InbreedingCoeff=0.8815;MQ=78.37;MQ0=0;MQRankSum=-1.377;QD=25.40;ReadPosRankSum=-1.156;VQSLOD=3.2526;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:95.98:0,96,833	0/0:16,0:16:44.98:0,45,391	0/0:23,0:24:47.48:0,47,396	0/0:16,0:16:32.35:0,32,282	1/1:3,22:25:63.13:683,63,0	1/1:5,22:27:34.09:594,34,0	1/1:3,17:20:32.93:543,33,0	1/1:5,31:36:93.20:999,93,0	0/1:1,7:8:1.99:208,0,2	0/0:31,0:31:50.96:0,51,621	0/0:30,0:30:80.95:0,81,700	1/1:1,15:16:42.10:453,42,0	1/1:3,22:25:60.16:664,60,0	1/1:1,17:19:54.15:597,54,0	0/0:28,0:28:77.96:0,78,674	0/0:20,0:21:56.01:0,56,475	0/0:30,0:30:86.98:0,87,755	1/1:1,13:14:36.10:397,36,0	0/0:15,0:15:23.98:0,24,208	0/0:26,0:26:47.73:0,48,548	0/1:12,2:14:27.37:27,0,247	1/1:1,13:14:39.11:431,39,0	1/1:4,20:24:31.10:571,31,0	1/1:2,13:17:41.78:427,42,0	1/1:3,17:21:44.95:479,45,0	1/1:5,22:27:63.17:695,63,0	1/1:4,29:33:75.16:816,75,0	1/1:1,10:11:30.08:332,30,0
chr10	21410998	.	T	TAA	3639.26	PASS	AB=0.837;AC=19;AF=0.339;AN=56;BaseQRankSum=2.525;DP=667;FS=3.370;HRun=14;HaplotypeScore=100.1847;InbreedingCoeff=0.7127;MQ=68.95;MQ0=4;MQRankSum=1.108;QD=14.22;ReadPosRankSum=-3.270;VQSLOD=2.1903;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:9,6:33:47.59:291,0,48	1/1:3,4:8:17.40:190,17,0	0/1:17,0:6:8.29:8,0,30	0/0:16,0:13:3.52:0,4,32	0/0:26,0:27:62.26:0,62,494	0/0:29,0:35:58.58:0,59,530	0/1:13,1:14:6.51:7,0,218	0/0:27,0:30:25.49:0,25,284	0/0:17,0:18:34.24:0,34,297	1/1:6,25:34:69.51:770,70,0	1/1:3,11:17:40.64:441,41,0	0/0:20,0:23:28.35:0,28,298	0/0:25,0:26:52.87:0,53,399	0/0:19,0:20:25.28:0,25,274	0/0:27,0:27:52.96:0,53,421	1/1:8,11:24:0.70:217,1,0	1/1:7,26:35:32.74:531,33,0	0/0:21,0:22:56.81:0,57,470	1/1:19,3:25:44.04:428,44,0	1/1:5,22:30:62.21:619,62,0	1/1:2,14:16:11.99:137,12,0	0/0:22,0:25:30.03:0,30,304	0/0:20,0:23:29.09:0,29,330	0/0:22,0:23:46.05:0,46,398	0/0:25,0:26:18.93:0,19,292	0/0:29,0:29:47.50:0,47,392	0/0:24,0:24:41.98:0,42,348	0/0:13,0:14:26.87:0,27,267
chr10	21413018	.	AC	A	7148.39	PASS	AB=0.908;AC=34;AF=0.607;AN=56;BaseQRankSum=10.708;DP=513;FS=3.743;HRun=10;HaplotypeScore=81.3354;InbreedingCoeff=0.7795;MQ=77.46;MQ0=0;MQRankSum=1.169;QD=19.69;ReadPosRankSum=3.663;VQSLOD=5.7218;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:45.07:0,45,476	0/0:3,0:3:6.02:0,6,66	0/0:21,0:20:11.06:0,11,128	0/0:16,0:13:3.12:0,3,105	1/1:2,29:31:80.86:694,81,0	1/1:2,25:27:65.96:573,66,0	1/1:5,17:22:41.89:364,42,0	1/1:12,12:24:38.62:336,39,0	1/1:2,21:23:62.95:547,63,0	0/0:14,0:14:9.02:0,9,100	0/0:5,0:5:6.02:0,6,67	1/1:5,16:21:56.94:487,57,0	1/1:5,25:30:74.92:651,75,0	1/1:0,20:20:56.99:495,57,0	0/1:20,2:22:30:30,0,366	0/0:15,0:15:36.08:0,36,383	0/0:25,0:25:40.31:0,40,671	1/1:0,16:16:44.99:391,45,0	0/1:8,1:9:11.03:11,0,109	0/0:10,0:10:12.02:0,12,122	0/0:22,0:22:42.07:0,42,444	1/1:2,12:14:32.99:286,33,0	1/1:3,10:13:29.95:260,30,0	1/1:3,13:16:38.96:338,39,0	1/1:1,18:19:47.98:417,48,0	1/1:0,17:17:50.99:442,51,0	1/1:1,18:19:50.97:442,51,0	1/1:5,15:20:44.92:384,45,0
chr10	21414537	.	CGACTGAG	C	13594.22	PASS	AB=0.516;AC=31;AF=0.554;AN=56;BaseQRankSum=15.304;DP=477;FS=61.096;HRun=0;HaplotypeScore=118.0390;InbreedingCoeff=0.8824;MQ=88.39;MQ0=0;MQRankSum=-15.777;QD=69.71;ReadPosRankSum=1.676;VQSLOD=2.8379;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:37:99:0,105,4263	0/0:3,0:3:9.03:0,9,377	0/0:26,0:26:72.25:0,72,2887	0/0:22,0:22:61.08:0,61,2141	1/1:0,13:13:27.09:749,27,0	1/1:0,16:15:42.14:1173,42,0	1/1:0,15:15:36.12:1005,36,0	1/1:0,17:17:51.12:1205,51,0	1/1:0,5:5:12.04:335,12,0	0/0:20,0:20:60.21:0,60,2393	0/0:17,0:17:51.18:0,51,2124	1/1:0,2:2:3.01:84,3,0	1/1:0,19:20:57.20:1589,57,0	1/1:0,21:20:51.18:1424,51,0	0/0:29,0:28:84.29:0,84,3330	0/0:20,0:20:54.14:0,54,2144	0/0:32,0:32:93.32:0,93,3759	1/1:0,8:8:24.08:642,24,0	0/0:24,0:24:72.23:0,72,2864	0/0:25,0:25:72.25:0,72,2964	0/0:26,0:26:78.27:0,78,3215	1/1:0,11:11:33.11:921,33,0	1/1:0,12:12:30.10:831,30,0	1/1:0,10:10:21.07:581,21,0	1/1:0,13:13:30.10:837,30,0	0/1:1,15:16:80.72:1129,0,81	1/1:0,13:13:30.10:838,30,0	1/1:0,3:3:9.03:251,9,0
chr10	21414673	.	TGAGA	T	581.18	PASS	AB=0.968;AC=20;AF=0.625;AN=32;BaseQRankSum=-0.296;DP=510;FS=6.198;HRun=0;HaplotypeScore=83.6306;InbreedingCoeff=0.1597;MQ=59.75;MQ0=36;MQRankSum=2.174;QD=2.68;ReadPosRankSum=-0.593;VQSLOD=1.0146;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:22:21.87:22,0,28	./.	./.	./.	./.	0/1:18,0:18:14.51:15,0,24	1/1:19,0:17:4.94:55,5,0	./.	./.	1/1:20,3:21:12.01:156,12,0	1/1:14,1:14:5.69:57,6,0	0/0:9,0:9:0.89:0,1,2	./.	./.	1/1:14,0:13:5.96:47,6,0	1/1:19,1:18:4.63:118,5,0	1/1:19,8:27:9.02:120,9,0	./.	1/1:10,0:10:5.81:50,6,0	./.	./.	0/1:15,0:15:13.11:13,0,14	1/1:10,0:9:3.01:37,3,0	0/0:17,0:16:1.55:0,2,4	0/0:11,0:11:1.25:0,1,3	./.	0/1:21,0:19:1.29:1,0,48	0/0:9,0:9:7.77:0,8,66
chr10	21414747	.	G	GAGAGGA	6686.63	PASS	AB=0.743;AC=31;AF=0.554;AN=56;BaseQRankSum=2.874;DP=546;FS=43.734;HRun=0;HaplotypeScore=169.2985;InbreedingCoeff=0.6421;MQ=44.85;MQ0=23;MQRankSum=-5.402;QD=27.52;ReadPosRankSum=-0.083;VQSLOD=2.2638;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:14.64:0,15,742	0/0:8,0:8:2.99:0,3,214	0/0:67,0:13:15.48:0,15,187	0/0:72,0:18:24.29:0,24,344	1/1:5,12:16:11.83:161,12,0	1/1:11,6:15:3.30:659,3,0	1/1:9,1:10:5.82:185,6,0	1/1:22,18:38:77.07:1340,77,0	1/1:3,9:12:10.78:341,11,0	0/0:20,0:20:30.71:0,31,883	0/0:20,0:20:26.92:0,27,411	1/1:1,6:7:8.92:196,9,0	0/1:2,6:8:18.88:478,0,19	1/1:5,8:13:20.10:427,20,0	0/0:17,0:16:3.70:0,4,545	0/1:15,0:14:67.37:67,0,486	0/0:22,0:21:32.86:0,33,675	1/1:1,7:8:12.03:329,12,0	0/0:21,0:21:42.01:0,42,741	0/0:15,0:15:20.99:0,21,310	0/0:16,0:16:10.67:0,11,472	1/1:4,5:11:9.50:215,10,0	1/1:7,3:10:13.91:165,14,0	1/1:14,3:17:7.57:48,8,0	0/1:10,11:21:40.17:551,0,40	1/1:4,8:14:26.83:602,27,0	1/1:1,11:12:17.99:520,18,0	1/1:4,5:9:13.95:400,14,0
chr10	21414759	.	AAGG	A	647.70	PASS	AB=0.862;AC=17;AF=0.304;AN=56;BaseQRankSum=9.261;DP=442;FS=20.702;HRun=0;HaplotypeScore=123.9555;InbreedingCoeff=-0.4175;MQ=46.81;MQ0=11;MQRankSum=-6.466;QD=2.93;ReadPosRankSum=0.992;VQSLOD=1.2163;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:17,5:22:91.28:91,0,1109	0/1:4,1:5:3.99:4,0,268	0/0:36,0:10:21:0,21,345	0/0:48,0:16:22.63:0,23,553	0/0:14,2:15:2.56:0,3,331	0/1:14,2:16:8.93:9,0,591	0/1:7,2:9:17.64:18,0,343	0/1:30,7:34:99:263,0,826	0/1:10,0:10:13.77:14,0,188	0/0:19,1:20:26.51:0,27,1319	0/0:14,0:14:36.12:0,36,863	0/1:6,1:7:5.47:5,0,172	0/1:6,2:8:0.81:1,0,277	0/1:9,2:11:51.31:51,0,246	0/1:11,5:15:95.40:95,0,623	0/0:12,0:12:26.69:0,27,746	0/0:20,2:21:18.49:0,18,969	0/1:6,1:7:39.62:40,0,140	0/0:17,0:17:0.65:0,1,883	0/0:10,0:10:24.07:0,24,529	0/0:14,0:15:32.12:0,32,684	0/0:8,0:8:12.04:0,12,264	0/1:5,1:6:4.01:4,0,198	0/1:9,3:13:42.90:43,0,69	0/1:15,3:18:21.87:22,0,352	0/1:13,1:14:57.39:57,0,495	0/1:11,1:12:32.19:32,0,231	0/1:9,1:10:45.30:45,0,302
chr10	21416048	.	TAC	T	65.65	PASS	AB=0.955;AC=5;AF=0.089;AN=56;BaseQRankSum=0.224;DP=527;FS=5.738;HRun=0;HaplotypeScore=135.6641;InbreedingCoeff=0.2930;MQ=55.48;MQ0=8;MQRankSum=0.283;QD=0.89;ReadPosRankSum=-4.153;VQSLOD=0.8709;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:48.16:0,48,738	0/0:10,0:10:24.08:0,24,371	0/0:28,0:18:19.18:0,19,324	0/0:20,0:14:20.01:0,20,380	0/0:26,0:25:22.61:0,23,103	0/1:15,1:16:3.77:4,0,27	0/0:16,0:16:14.81:0,15,46	0/1:23,1:19:0.45:97,0,0	0/0:15,0:14:9.21:0,9,47	0/0:28,0:27:50:0,50,718	0/0:8,0:8:18.06:0,18,261	0/0:29,0:29:17.91:0,18,76	0/0:17,0:17:13.11:0,13,41	0/0:20,0:19:0.80:0,1,25	0/0:26,0:25:54.14:0,54,797	0/0:19,0:18:36.12:0,36,561	0/0:14,0:14:33.02:0,33,527	1/1:8,0:7:3.11:42,3,0	0/0:17,0:17:48.11:0,48,701	0/0:16,0:16:22.63:0,23,314	0/0:13,0:11:24.55:0,25,381	0/0:28,0:28:22.86:0,23,72	0/0:20,0:19:20.09:0,20,63	0/0:23,1:20:4.45:0,4,63	0/0:10,0:10:11:0,11,33	0/1:25,1:26:27.29:27,0,89	0/0:19,1:18:7.66:0,8,23	0/0:5,1:6:4.78:0,5,12
chr10	21416050	.	C	CACACAT	14137.41	PASS	AB=0.736;AC=32;AF=0.571;AN=56;BaseQRankSum=2.810;DP=549;FS=0.979;HRun=0;HaplotypeScore=137.3274;InbreedingCoeff=0.8345;MQ=54.79;MQ0=8;MQRankSum=-12.463;QD=40.74;ReadPosRankSum=9.586;VQSLOD=4.0837;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:47.93:0,48,517	0/0:10,0:10:24.02:0,24,373	0/0:26,0:16:16.71:0,17,529	0/0:20,0:14:24.32:0,24,514	1/1:5,19:25:33.11:1149,33,0	1/1:4,13:19:27.07:808,27,0	1/1:5,10:18:21.03:731,21,0	1/1:6,15:17:39.03:1072,39,0	1/1:4,12:16:30.10:1043,30,0	0/0:26,0:26:52.96:0,53,732	0/0:8,0:8:18.04:0,18,335	1/1:5,23:31:45.11:1562,45,0	1/1:2,13:17:21.07:732,21,0	1/1:7,15:24:24.08:830,24,0	0/0:26,0:25:54.11:0,54,966	0/0:17,0:16:36.08:0,36,649	0/0:15,0:15:35.81:0,36,673	1/1:8,2:9:21.02:531,21,0	0/0:16,0:16:48.12:0,48,909	0/1:13,0:14:25.74:26,0,251	0/0:13,0:11:24.03:0,24,416	1/1:3,26:30:30.10:1044,30,0	1/1:3,18:21:27.09:940,27,0	1/1:13,13:22:38.83:1299,39,0	1/1:0,10:10:15.05:519,15,0	0/1:4,24:28:24.40:1074,0,24	1/1:4,17:19:12.51:417,13,0	1/1:3,6:9:8.88:362,9,0
chr10	21416068	.	G	GGA	6496.43	PASS	AB=1.000;AC=45;AF=0.804;AN=56;BaseQRankSum=-0.703;DP=579;FS=10.556;HRun=0;HaplotypeScore=152.7603;InbreedingCoeff=0.3999;MQ=67.23;MQ0=2;MQRankSum=-3.161;QD=12.54;ReadPosRankSum=-2.116;VQSLOD=3.6559;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:22:29.49:0,29,240	1/1:0,6:7:2.84:21,3,0	0/0:22,0:17:32.01:0,32,410	0/0:16,0:13:21.77:0,22,283	1/1:34,0:34:52.98:328,53,0	1/1:20,0:21:16.90:133,17,0	0/1:14,0:14:1.70:46,0,2	0/1:26,0:21:8.72:225,0,9	1/1:20,0:20:30.72:249,31,0	1/1:0,21:22:53.88:637,54,0	1/1:0,15:15:35.69:366,36,0	1/1:29,0:29:41.28:257,41,0	1/1:21,0:21:16.60:191,17,0	1/1:29,0:28:1.92:241,2,0	0/1:28,0:27:53.69:206,0,54	1/1:1,12:14:20.77:298,21,0	1/1:18,5:26:74.23:976,74,0	0/1:8,0:8:7.11:37,0,7	1/1:3,3:18:47.56:449,48,0	1/1:2,13:16:26.72:243,27,0	1/1:15,1:17:41.66:471,42,0	1/1:23,0:23:35.76:223,36,0	1/1:27,0:28:3.68:133,4,0	1/1:26,0:24:31.12:212,31,0	1/1:15,0:16:10.21:145,10,0	1/1:26,1:28:16.19:244,16,0	1/1:20,0:18:4.95:126,5,0	0/1:10,0:10:3.87:39,0,4
chr10	21416259	.	ATGTGAGTGTG	A	13184.11	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=-2.191;DP=1117;FS=2.188;HRun=0;HaplotypeScore=377.4602;InbreedingCoeff=0.9576;MQ=51.97;MQ0=13;MQRankSum=-8.582;QD=24.92;ReadPosRankSum=1.891;VQSLOD=2.4847;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,132,5260	0/0:14,0:14:39.10:0,39,1073	0/0:42,0:24:23.32:0,23,521	0/0:50,0:21:2.84:0,3,665	1/1:1,23:23:11.16:302,11,0	1/1:14,6:20:37.35:710,37,0	1/1:24,8:32:46.97:883,47,0	1/1:14,36:50:99:1408,108,0	1/1:7,58:65:79.81:2136,80,0	0/0:54,0:52:99:0,132,3941	0/0:21,0:20:33.10:0,33,1065	1/1:6,37:43:36.01:928,36,0	1/1:8,41:49:54.18:1516,54,0	1/1:8,35:43:42.14:1069,42,0	0/0:68,0:68:99:0,175,6307	0/0:59,1:60:99:0,113,4232	0/0:42,0:42:63.30:0,63,2722	1/1:15,2:17:24.04:425,24,0	0/0:27,0:24:56.78:0,57,1741	0/0:26,0:25:42.14:0,42,1494	0/0:131,0:130:99:0,191,6305	1/1:12,4:13:27.09:537,27,0	1/1:4,28:29:14.58:352,15,0	1/1:34,10:43:29.35:591,29,0	1/1:3,16:19:15.05:355,15,0	1/1:16,29:43:29.19:1398,29,0	1/1:3,19:22:12.04:318,12,0	1/1:5,2:7:15.05:255,15,0
chr10	21416264	.	AGT	A	7047.89	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=8.232;DP=1091;FS=3.078;HRun=0;HaplotypeScore=282.0182;InbreedingCoeff=0.9746;MQ=51.58;MQ0=15;MQRankSum=-10.089;QD=13.90;ReadPosRankSum=1.184;VQSLOD=4.4292;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,138,2343	0/0:14,0:14:39.08:0,39,575	0/0:38,0:19:28.53:0,29,480	0/0:49,0:18:8.86:0,9,602	1/1:24,0:23:11.20:155,11,0	1/1:12,6:18:36.51:436,37,0	1/1:24,9:33:52.47:589,52,0	1/1:45,0:44:96.27:1213,96,0	1/1:61,0:62:77.24:709,77,0	0/0:57,0:54:99:0,144,2192	0/0:18,0:18:33.10:0,33,527	1/1:42,0:42:35.89:382,36,0	1/1:47,0:47:53.52:498,54,0	1/1:40,0:40:41.91:471,42,0	0/0:68,0:68:99:0,181,2995	0/0:62,0:62:99:0,118,1946	0/0:43,0:43:86.09:0,86,1377	1/1:15,2:17:29.61:345,30,0	0/0:24,0:21:59.79:0,60,950	0/0:22,0:21:44.18:0,44,730	0/0:136,0:134:99:0,200,3294	1/1:10,8:15:33.10:423,33,0	1/1:31,0:28:14.60:199,15,0	1/1:28,14:41:29.38:393,29,0	1/1:17,0:17:15.04:199,15,0	1/1:41,2:42:26.23:726,26,0	1/1:21,0:21:11.90:113,12,0	1/1:4,2:6:15.05:196,15,0
chr10	21416278	.	T	TGTGA	15660.65	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-17.613;DP=1100;FS=2.204;HRun=0;HaplotypeScore=277.2460;InbreedingCoeff=0.9449;MQ=50.85;MQ0=17;MQRankSum=7.324;QD=41.43;ReadPosRankSum=6.534;VQSLOD=4.7074;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,135,2271	1/1:2,9:12:30.93:720,31,0	0/0:41,0:15:21.02:0,21,283	0/0:49,0:15:31.56:0,32,470	0/0:25,0:24:17.96:0,18,242	0/0:17,0:17:33.03:0,33,434	0/0:33,0:33:50.88:0,51,667	0/0:45,0:44:75.17:0,75,1037	0/0:69,0:69:99:0,99,1183	1/1:5,51:52:99:3209,144,0	1/1:1,15:17:23.98:623,24,0	0/0:50,0:50:48.08:0,48,567	0/0:51,0:51:75.06:0,75,919	0/0:43,0:43:51.10:0,51,676	0/0:61,0:61:99:0,159,2718	1/1:3,58:63:99:2693,105,0	1/1:3,40:46:69.19:1733,69,0	0/0:15,0:15:17.88:0,18,433	1/1:3,23:28:81.13:1628,81,0	1/1:1,21:22:36.12:935,36,0	1/1:19,108:130:99:4120,152,0	0/0:21,0:18:39.10:0,39,556	0/0:28,0:25:14.96:0,15,221	0/0:40,0:39:29.09:0,29,387	0/0:19,0:19:21.04:0,21,276	0/0:36,0:33:0.55:0,1,531	0/0:20,0:20:15:0,15,154	0/0:5,0:5:12.04:0,12,185
chr10	21416295	.	G	GAA	1513.64	PASS	AB=0.989;AC=16;AF=0.286;AN=56;BaseQRankSum=10.936;DP=1075;FS=3.833;HRun=0;HaplotypeScore=291.5435;InbreedingCoeff=-0.2290;MQ=49.88;MQ0=10;MQRankSum=-11.310;QD=3.22;ReadPosRankSum=-6.286;VQSLOD=1.1526;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,138,2251	0/0:12,0:12:36.10:0,36,555	0/0:41,0:18:42.11:0,42,636	0/0:48,0:16:26.09:0,26,497	0/1:28,0:27:62.08:62,0,323	0/1:14,0:14:99:104,0,300	0/1:31,2:33:99:110,0,797	0/0:46,0:45:99:0,108,1641	0/1:68,0:68:99:185,0,1031	0/0:54,0:50:99:0,147,2305	0/0:12,0:12:30.10:0,30,477	0/1:44,0:44:99:116,0,656	0/1:61,0:61:99:137,0,1071	0/1:46,0:46:99:235,0,525	0/0:57,0:57:99:0,159,2538	0/0:59,0:59:99:0,135,2077	0/0:52,0:52:96.33:0,96,1541	0/1:16,1:17:21.50:21,0,535	0/0:35,0:34:74.74:0,75,1147	0/0:22,0:22:51.17:0,51,827	0/0:116,0:114:99:0,210,3363	0/1:17,0:15:99:147,0,218	1/1:23,0:20:14.83:153,15,0	0/1:41,2:42:99:137,0,550	0/1:20,0:20:99:125,0,212	0/1:28,0:27:74.90:75,0,535	0/1:23,0:23:46.71:47,0,294	0/1:5,0:5:24.88:25,0,132
chr10	21416393	.	C	CTG	15050.65	PASS	AB=0.743;AC=30;AF=0.536;AN=56;BaseQRankSum=-6.775;DP=1202;FS=13.601;HRun=0;HaplotypeScore=252.0448;InbreedingCoeff=0.8836;MQ=55.01;MQ0=18;MQRankSum=1.301;QD=25.13;ReadPosRankSum=2.512;VQSLOD=3.6052;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:54:99:0,140,1816	0/0:13,0:13:36.12:0,36,468	0/0:56,0:33:63.81:0,64,703	0/0:64,0:31:65.84:0,66,752	1/1:9,14:23:33.11:545,33,0	1/1:6,21:27:33.90:508,34,0	1/1:14,31:45:61.35:1260,61,0	0/1:44,6:48:99:593,0,750	1/1:19,26:43:75.24:1240,75,0	0/0:55,0:55:99:0,147,1847	0/0:25,0:25:51.79:0,52,805	1/1:11,39:49:56.98:1540,57,0	1/1:13,32:44:99:1781,108,0	1/1:16,30:45:54.16:858,54,0	0/0:61,0:61:99:0,160,2054	0/0:48,0:48:99:0,117,1507	0/0:48,1:49:73.74:0,74,1564	1/1:6,24:31:48.16:801,48,0	0/0:23,0:23:57.18:0,57,741	0/0:19,0:19:41.98:0,42,546	0/0:133,0:133:99:0,318,4081	1/1:10,23:32:57.19:960,57,0	1/1:7,16:23:30.09:504,30,0	1/1:24,57:78:44.19:1324,44,0	1/1:6,16:21:33.09:533,33,0	0/1:17,37:52:1.48:1634,0,1	1/1:4,14:17:42.61:714,43,0	1/1:0,5:5:15.05:255,15,0
chr10	21416442	.	CTG	C	9317.90	PASS	AB=0.681;AC=28;AF=0.500;AN=56;BaseQRankSum=12.513;DP=1019;FS=5.411;HRun=0;HaplotypeScore=268.5946;InbreedingCoeff=0.7158;MQ=51.61;MQ0=13;MQRankSum=-8.690;QD=19.41;ReadPosRankSum=2.710;VQSLOD=4.3532;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,132,2175	0/0:9,0:9:27.09:0,27,459	0/0:61,0:31:53.76:0,54,1000	0/0:55,0:27:29.85:0,30,736	1/1:7,21:28:39.08:489,39,0	0/1:9,10:19:14.80:320,0,15	1/1:10,37:46:99:1304,102,0	0/1:26,11:37:99:422,0,680	1/1:11,20:33:44.05:564,44,0	0/0:50,0:50:99:0,138,2329	0/0:30,0:30:75.26:0,75,1273	1/1:15,19:36:45.09:550,45,0	1/1:10,32:45:80.72:1138,81,0	1/1:6,30:35:71.43:888,71,0	0/0:47,0:47:99:0,120,1954	0/0:41,0:41:99:0,99,1653	0/0:45,0:45:99:0,120,2011	0/1:14,11:27:67.53:318,0,68	0/0:20,0:17:45.15:0,45,755	0/0:19,0:19:45.15:0,45,765	0/0:113,1:113:99:0,277,4773	1/1:5,23:27:51.12:644,51,0	1/1:10,14:25:30.05:371,30,0	1/1:23,16:39:35.57:435,36,0	1/1:5,13:23:27.52:333,28,0	0/1:8,21:29:99:765,0,132	1/1:2,13:16:33.41:466,33,0	1/1:1,7:9:24.08:311,24,0
chr10	21418006	.	C	CAGCT	23690.90	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=-17.123;DP=765;FS=0.000;HRun=0;HaplotypeScore=123.6348;InbreedingCoeff=0.9991;MQ=85.72;MQ0=0;MQRankSum=-4.954;QD=59.52;ReadPosRankSum=3.042;VQSLOD=6.2270;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:58:99:0,166,2964	0/0:21,0:21:60.16:0,60,1077	0/0:26,0:27:66.20:0,66,1118	0/0:32,0:32:48.02:0,48,1292	1/1:2,16:20:27.09:717,27,0	1/1:1,10:11:21.07:560,21,0	1/1:3,27:30:75.26:1998,75,0	1/1:8,30:40:99:2796,111,0	1/1:2,23:25:60.21:1597,60,0	0/0:28,0:28:78.24:0,78,1364	0/0:25,0:25:66.21:0,66,1181	1/1:2,15:17:39.13:1038,39,0	1/1:4,26:31:54.19:1413,54,0	1/1:5,26:31:75.26:1997,75,0	0/0:33,0:33:99:0,99,1826	0/0:17,0:17:48.15:0,48,863	0/0:33,0:33:96.29:0,96,1702	1/1:3,20:23:57.20:1520,57,0	0/0:18,0:18:45.15:0,45,785	0/0:17,0:17:51.14:0,51,889	0/0:58,0:58:99:0,172,3133	1/1:5,26:32:66.70:1749,67,0	1/1:3,15:18:27.09:719,27,0	1/1:5,35:43:96.33:2560,96,0	1/1:4,16:20:39.13:1040,39,0	1/1:5,23:28:75.24:1831,75,0	1/1:0,15:14:45.15:1197,45,0	1/1:1,13:14:36.12:960,36,0
chr10	21418473	.	T	TA	4640.45	PASS	AB=0.806;AC=33;AF=0.589;AN=56;BaseQRankSum=-8.741;DP=480;FS=1.463;HRun=12;HaplotypeScore=75.8716;InbreedingCoeff=0.6636;MQ=77.32;MQ0=1;MQRankSum=-0.652;QD=13.77;ReadPosRankSum=-1.796;VQSLOD=4.7517;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:17,2:19:22.19:22,0,200	0/0:3,0:8:10.17:0,10,29	0/1:21,1:11:11.73:12,0,48	0/0:25,0:17:4.54:0,5,47	1/1:12,18:30:7.32:385,7,0	1/1:2,19:21:42.02:399,42,0	0/1:3,11:15:23.83:264,0,24	1/1:5,14:19:42.06:404,42,0	1/1:8,12:20:28.24:256,28,0	0/0:3,0:19:28.50:0,29,82	0/0:3,0:13:20.45:0,20,73	1/1:5,9:14:21.03:204,21,0	1/1:6,6:12:2.02:163,2,0	1/1:7,14:21:11.13:264,11,0	0/0:15,0:15:29.79:0,30,219	0/0:2,0:15:20.34:0,20,59	0/0:2,0:17:26.47:0,26,76	1/1:11,10:21:36.04:342,36,0	0/0:3,0:10:13.09:0,13,37	0/0:3,0:9:12.21:0,12,35	0/0:3,0:11:10.15:0,10,29	1/1:6,10:16:22.23:198,22,0	1/1:5,11:16:33.05:321,33,0	1/1:7,16:23:1.23:325,1,0	1/1:4,17:21:23.16:387,23,0	1/1:14,11:26:20.16:217,20,0	1/1:3,11:14:31.59:332,32,0	1/1:2,5:7:15.02:146,15,0
chr10	21418497	.	TTGTG	T	2684.63	PASS	AB=0.697;AC=33;AF=0.611;AN=54;BaseQRankSum=-1.709;DP=502;FS=9.227;HRun=0;HaplotypeScore=108.9013;InbreedingCoeff=0.7275;MQ=61.26;MQ0=11;MQRankSum=-2.427;QD=9.52;ReadPosRankSum=0.648;VQSLOD=2.3528;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:14,2:18:12.02:149,12,0	0/0:4,0:5:9.02:0,9,125	0/0:42,0:10:3.01:0,3,37	0/0:41,0:18:6.02:0,6,78	1/1:15,4:21:3.79:178,4,0	1/1:15,1:17:9.01:99,9,0	1/1:12,3:16:15.04:208,15,0	1/1:22,0:22:3.01:45,3,0	1/1:15,4:18:15.05:234,15,0	0/0:23,0:24:27.09:0,27,464	0/0:15,0:16:21.07:0,21,346	1/1:11,2:15:15.04:196,15,0	1/1:9,2:11:11.96:157,12,0	1/1:11,5:17:5.60:222,6,0	0/0:8,0:9:11.77:0,12,166	0/0:14,0:16:21.07:0,21,365	0/0:18,0:21:33.58:0,34,588	0/1:13,9:23:44.17:139,0,44	./.	0/0:10,0:13:18.05:0,18,304	0/0:16,0:16:15.05:0,15,255	1/1:6,1:7:3.01:46,3,0	1/1:11,3:13:12.01:150,12,0	1/1:15,5:21:18.05:262,18,0	1/1:16,2:19:12.03:149,12,0	1/1:13,5:18:11.92:283,12,0	1/1:6,2:11:15.03:177,15,0	1/1:7,3:8:12.04:187,12,0
chr10	21420349	.	A	AAGGAACGGCT	20278.76	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=-5.386;DP=833;FS=2.351;HRun=0;HaplotypeScore=229.6798;InbreedingCoeff=0.9130;MQ=88.83;MQ0=0;MQRankSum=-16.422;QD=84.14;ReadPosRankSum=-2.723;VQSLOD=4.2967;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,154,5003	1/1:2,11:16:39.13:1979,39,0	0/0:32,0:32:84.70:0,85,2230	0/0:36,0:36:99:0,99,2804	0/0:29,0:29:87.24:0,87,2677	0/0:20,0:20:60.21:0,60,1885	0/0:38,0:38:99:0,108,3423	0/0:25,0:25:69.24:0,69,2055	0/0:29,0:29:81.26:0,81,2619	1/1:6,11:30:78.19:3150,78,0	1/1:3,9:25:36.06:1691,36,0	0/0:43,0:43:99:0,120,3600	0/0:25,0:25:69.24:0,69,2233	0/0:39,0:39:99:0,117,3737	0/0:47,0:47:99:0,141,4358	1/1:10,22:42:94.65:4737,95,0	1/1:5,15:23:48.08:2369,48,0	0/0:31,0:31:90.25:0,90,2833	1/1:5,6:19:51.09:1849,51,0	1/1:8,10:26:63.11:2682,63,0	1/1:10,6:29:36.12:1755,36,0	0/0:30,0:30:84.29:0,84,2645	0/0:17,0:17:51.16:0,51,1558	0/0:42,0:42:99:0,123,3604	0/0:25,0:25:72.23:0,72,2256	0/1:31,0:31:66.45:66,0,2535	0/0:28,0:28:81.28:0,81,2623	0/0:5,0:5:15.05:0,15,500
chr10	21420739	.	C	CA	7760.44	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-14.070;DP=769;FS=4.071;HRun=2;HaplotypeScore=74.7637;InbreedingCoeff=0.9991;MQ=87.67;MQ0=0;MQRankSum=-5.596;QD=37.31;ReadPosRankSum=2.238;VQSLOD=5.6602;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,142,1717	1/1:2,11:13:27.06:366,27,0	0/0:28,0:28:72.18:0,72,839	0/0:34,0:34:89.30:0,89,976	0/0:31,0:31:90.26:0,90,1091	0/0:25,0:25:72.23:0,72,892	0/0:28,0:28:84.20:0,84,999	0/0:25,0:25:72.23:0,72,892	0/0:24,0:24:72.21:0,72,879	1/1:1,33:34:96.28:1339,96,0	1/1:1,24:25:66.22:948,66,0	0/0:32,0:32:93.29:0,93,1152	0/0:21,0:21:63.20:0,63,781	0/0:24,0:24:63.18:0,63,768	0/0:39,0:39:99:0,114,1364	1/1:0,27:27:75.25:1079,75,0	1/1:0,28:28:78.26:1122,78,0	0/0:21,0:21:54.17:0,54,669	1/1:2,16:18:51.10:668,51,0	1/1:1,30:31:75.17:1031,75,0	1/1:2,30:32:84.28:1206,84,0	0/0:28,0:28:78.24:0,78,966	0/0:19,0:19:51.16:0,51,632	0/0:36,0:36:99:0,99,1214	0/0:26,0:26:75.24:0,75,929	0/0:36,0:36:99:0,99,1204	0/0:26,0:26:72.21:0,72,878	0/0:9,0:9:21.07:0,21,260
chr10	21421247	.	CCA	C	1062.54	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=3.380;DP=503;FS=3.314;HRun=0;HaplotypeScore=72.8825;InbreedingCoeff=0.3312;MQ=74.37;MQ0=0;MQRankSum=-2.570;QD=8.43;ReadPosRankSum=-1.527;VQSLOD=3.0268;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:4,32:36:66.21:842,66,0	0/1:9,0:9:16.68:17,0,29	0/0:18,0:18:34.41:0,34,443	0/0:17,0:17:32.76:0,33,369	0/0:17,0:17:48.11:0,48,712	0/0:20,0:20:51.12:0,51,766	0/0:26,0:26:72.13:0,72,992	0/0:23,0:23:27.07:0,27,373	0/0:15,0:15:42.14:0,42,686	0/1:19,0:19:57.85:71,0,58	0/1:12,0:12:7.48:7,0,94	0/0:21,0:21:57.02:0,57,835	0/0:13,0:13:30.09:0,30,472	0/0:24,0:24:63.18:0,63,989	1/1:19,0:19:22.66:176,23,0	0/0:10,0:10:14.83:0,15,126	0/0:26,0:26:14.18:0,14,288	0/0:12,0:12:33.06:0,33,493	0/1:14,0:14:9.80:10,0,111	0/0:10,0:10:4.31:0,4,77	0/1:17,0:17:88.78:89,0,102	0/0:19,0:19:51.15:0,51,786	0/0:15,0:15:39.08:0,39,601	0/0:16,0:16:45.11:0,45,669	0/0:19,0:19:57.14:0,57,844	0/0:27,0:27:68.75:0,69,1046	0/0:19,0:19:51.01:0,51,758	0/0:10,0:10:21.03:0,21,276
chr10	21421248	.	CA	C	1385.40	PASS	AB=0.962;AC=14;AF=0.250;AN=56;BaseQRankSum=3.114;DP=494;FS=5.170;HRun=1;HaplotypeScore=60.7647;InbreedingCoeff=0.4280;MQ=73.50;MQ0=0;MQRankSum=-0.591;QD=8.20;ReadPosRankSum=-4.017;VQSLOD=-0.5920;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:34,1:35:18.47:221,18,0	1/1:8,0:8:0.19:61,0,0	0/0:16,0:16:24.45:0,24,419	0/0:16,0:17:38.75:0,39,405	0/0:17,0:17:48.14:0,48,649	0/0:21,0:21:60.10:0,60,726	0/0:26,0:26:75.16:0,75,925	0/0:19,1:20:32.97:0,33,384	0/0:15,0:15:45.12:0,45,592	1/1:16,3:19:9.11:181,9,0	0/1:12,0:12:18.88:37,0,19	0/0:21,0:21:55.52:0,56,722	0/0:12,0:12:36.08:0,36,451	0/0:24,0:24:72.14:0,72,914	1/1:6,12:18:44.93:588,45,0	0/1:10,0:10:9.28:9,0,46	0/1:24,2:26:40.13:160,0,40	0/0:12,0:12:36.05:0,36,444	0/1:13,1:14:7.16:99,0,7	0/1:9,1:10:27.71:72,0,28	0/1:17,0:17:2.17:125,0,2	0/0:20,0:20:54.13:0,54,698	0/0:14,0:14:42.05:0,42,521	0/0:15,0:15:45.12:0,45,591	0/0:19,0:19:57.15:0,57,743	0/0:26,1:27:52.45:0,52,896	0/0:19,0:19:49.53:0,50,657	0/0:10,0:10:24.02:0,24,282
chr10	21422127	.	TG	T	7864.08	PASS	AB=0.769;AC=48;AF=0.857;AN=56;BaseQRankSum=3.446;DP=430;FS=12.341;HRun=9;HaplotypeScore=47.3560;InbreedingCoeff=0.7463;MQ=81.35;MQ0=0;MQRankSum=-4.898;QD=21.03;ReadPosRankSum=3.769;VQSLOD=4.5759;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:57.07:0,57,615	1/1:0,13:13:32.90:302,33,0	0/1:20,1:21:11.99:12,0,284	0/0:15,0:15:30.08:0,30,340	1/1:1,12:13:32.98:295,33,0	1/1:1,19:20:51.03:467,51,0	1/1:2,13:15:42.02:384,42,0	1/1:5,17:23:53.06:472,53,0	1/1:2,10:12:27.01:247,27,0	1/1:4,10:14:30.01:272,30,0	1/1:1,10:11:24.01:220,24,0	1/1:0,9:9:27.01:247,27,0	1/1:1,11:12:30.02:275,30,0	1/1:3,7:10:21:192,21,0	0/0:19,0:19:48.12:0,48,538	1/1:1,14:15:33.01:302,33,0	0/1:4,10:14:4.60:216,0,5	1/1:1,11:12:36.02:329,36,0	1/1:2,11:13:35.61:312,36,0	1/1:0,16:17:45.02:412,45,0	1/1:3,13:16:36.02:330,36,0	1/1:1,8:9:27.01:247,27,0	1/1:2,12:14:33.02:301,33,0	1/1:3,18:21:41.76:384,42,0	1/1:1,18:19:51.03:466,51,0	1/1:2,12:14:33.02:302,33,0	1/1:4,18:22:51.02:467,51,0	1/1:0,15:15:45.02:412,45,0
chr10	21422276	.	G	GAT	6766.08	PASS	AB=1.000;AC=34;AF=0.607;AN=56;BaseQRankSum=10.914;DP=349;FS=5.054;HRun=0;HaplotypeScore=50.2531;InbreedingCoeff=0.8575;MQ=67.04;MQ0=0;MQRankSum=-0.695;QD=31.77;ReadPosRankSum=-0.064;VQSLOD=6.2059;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:39.11:0,39,492	0/0:12,0:12:33.11:0,33,429	0/1:3,0:1:0:0,0,0	0/1:10,0:10:0.53:1,0,63	1/1:3,13:16:27.09:443,27,0	1/1:2,21:23:51.17:867,51,0	1/1:2,4:6:9.03:153,9,0	1/1:7,29:36:87.28:1430,87,0	1/1:0,7:6:12.04:204,12,0	0/0:17,0:17:42.14:0,42,545	0/0:12,0:12:30.10:0,30,389	1/1:0,4:4:12.04:204,12,0	1/1:4,2:6:12.04:195,12,0	1/1:1,3:4:9.03:153,9,0	0/0:11,0:11:33.11:0,33,427	0/0:11,0:11:24.06:0,24,298	0/0:24,0:24:66.16:0,66,818	1/1:1,9:10:15.05:255,15,0	0/0:11,0:11:24.08:0,24,312	0/0:15,0:15:30.10:0,30,387	0/0:5,0:5:15.04:0,15,179	1/1:1,2:3:6.02:102,6,0	1/1:4,3:7:6.02:102,6,0	1/1:3,1:4:6.02:98,6,0	1/1:2,17:19:39.13:663,39,0	1/1:2,10:12:33.11:536,33,0	1/1:3,17:20:36.12:595,36,0	1/1:6,17:23:45.15:765,45,0
chr10	21422459	.	AG	A	6284.88	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-12.327;DP=556;FS=9.792;HRun=1;HaplotypeScore=100.6649;InbreedingCoeff=0.9977;MQ=91.35;MQ0=1;MQRankSum=-2.592;QD=39.28;ReadPosRankSum=2.058;VQSLOD=4.5814;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:66.22:0,66,1048	1/1:0,7:7:18.06:251,18,0	0/0:24,0:24:62.99:0,63,888	0/0:23,0:23:67.70:0,68,868	0/0:23,0:23:69.23:0,69,1091	0/0:20,0:20:60.20:0,60,952	0/0:11,0:11:33.11:0,33,528	0/0:35,0:35:99:0,105,1625	0/0:20,0:20:57.19:0,57,896	1/1:0,29:29:87.29:1211,87,0	1/1:0,20:20:60.20:838,60,0	0/0:15,0:15:45.14:0,45,698	0/0:19,0:19:57.19:0,57,911	0/0:20,0:20:60.20:0,60,959	0/0:25,0:25:75.25:0,75,1178	1/1:0,22:22:60.20:835,60,0	1/1:0,21:21:57.19:797,57,0	0/0:13,0:13:39.13:0,39,624	1/1:0,23:23:69.19:927,69,0	1/1:0,18:18:45.15:629,45,0	1/1:0,20:20:57.19:796,57,0	0/0:9,0:9:27.09:0,27,432	0/0:12,0:12:36.11:0,36,553	0/0:15,0:15:45.09:0,45,667	0/0:23,0:23:69.24:0,69,1096	0/0:20,1:21:21.24:0,21,898	0/0:20,0:19:60.16:0,60,889	0/0:24,0:24:72.25:0,72,1148
chr10	21423756	.	CCAGCAGCAGCAG	C	3070.38	PASS	AB=0.852;AC=17;AF=0.425;AN=40;BaseQRankSum=-3.622;DP=183;FS=3.594;HRun=0;HaplotypeScore=60.3693;InbreedingCoeff=0.4691;MQ=35.87;MQ0=33;MQRankSum=-0.179;QD=33.01;ReadPosRankSum=-0.169;VQSLOD=2.3259;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:6:3.01:0,3,96	./.	./.	0/0:8,0:5:11.63:0,12,256	./.	0/0:4,0:2:3.01:0,3,47	1/1:18,0:12:18.06:449,18,0	1/1:2,3:4:8.96:161,9,0	1/1:11,0:11:13.27:544,13,0	0/0:2,0:2:6.02:0,6,159	./.	1/1:8,0:7:18.06:429,18,0	1/1:9,0:6:15.05:399,15,0	0/1:17,0:15:13.66:655,0,14	0/0:9,0:8:15.05:0,15,485	0/0:12,0:11:27.09:0,27,787	0/0:9,0:9:15.05:0,15,350	0/1:7,0:6:12.44:197,0,12	0/0:3,0:3:8.99:0,9,135	./.	0/0:15,0:8:1.25:0,1,3	./.	./.	1/1:10,0:6:6.02:163,6,0	./.	0/1:1,4:5:23.95:83,0,24	1/1:3,0:3:6.02:140,6,0	0/0:3,0:2:3.01:0,3,38
chr10	21424069	.	G	GT	2327.57	PASS	AB=0.500;AC=35;AF=0.875;AN=40;BaseQRankSum=-4.730;DP=279;FS=11.613;HRun=1;HaplotypeScore=47.5467;InbreedingCoeff=0.4547;MQ=78.94;MQ0=19;MQRankSum=-3.931;QD=13.85;ReadPosRankSum=4.480;VQSLOD=1.4680;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,12:12:6.02:94,6,0	./.	0/0:26,0:16:30.01:0,30,212	0/0:21,0:13:4.36:0,4,100	./.	1/1:6,6:10:9.02:124,9,0	./.	1/1:0,3:5:12.04:155,12,0	1/1:0,7:10:3:26,3,0	1/1:3,6:10:27.09:376,27,0	1/1:1,1:1:3.01:38,3,0	1/1:0,13:13:3.01:45,3,0	1/1:1,10:11:12.03:161,12,0	0/1:0,6:6:0:0,0,0	./.	./.	1/1:0,12:12:1.82:5,2,0	1/1:2,5:8:12.03:163,12,0	1/1:1,13:15:42.13:603,42,0	1/1:1,3:3:9.03:133,9,0	1/1:1,8:8:3.01:48,3,0	./.	./.	1/1:2,11:12:3.01:45,3,0	./.	1/1:1,6:6:9.03:116,9,0	1/1:0,6:7:15.05:215,15,0	1/1:1,0:3:9.02:90,9,0
chr10	21424086	.	AT	A	9364.77	PASS	AB=0.982;AC=19;AF=0.339;AN=56;BaseQRankSum=20.116;DP=5802;DS;FS=49.848;HRun=1;HaplotypeScore=1531.3577;InbreedingCoeff=-0.0045;MQ=31.45;MQ0=127;MQRankSum=-1.995;QD=2.63;ReadPosRankSum=3.411;VQSLOD=-0.4915;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:248,2:218:77.18:0,77,2019	0/1:132,0:112:99:786,0,304	0/0:76,1:26:75.25:0,75,1162	0/0:77,0:27:53.56:0,54,655	0/1:250,0:208:83.39:776,0,83	0/0:245,5:206:60.36:0,60,3329	0/1:143,4:108:10.30:10,0,1567	0/0:140,3:91:93.39:0,93,1867	0/0:249,1:205:96.33:0,96,1871	0/1:247,3:211:4.79:5,0,4347	1/1:250,0:219:99:1687,170,0	0/1:244,6:197:3.88:4,0,2916	0/0:246,4:210:99:0,116,3710	0/1:244,6:205:19.11:19,0,2746	0/1:236,14:205:99:147,0,3650	0/0:248,2:210:99:0,319,5430	0/1:243,7:220:70.37:70,0,2333	0/1:245,5:202:99:106,0,2784	0/0:248,2:176:99:0,171,2843	1/1:250,0:215:99:2352,297,0	0/1:59,2:46:61.49:61,0,379	0/1:249,1:206:99:692,0,1278	1/1:250,0:223:99:1245,167,0	0/0:96,1:86:13.08:0,13,390	0/1:227,0:199:99:1299,0,138	0/1:247,3:203:99:105,0,3245	0/0:246,4:213:99:0,180,4083	0/0:91,0:74:22.34:0,22,1510
chr10	21424106	.	A	AT	7382.58	PASS	AB=0.802;AC=8;AF=0.143;AN=56;BaseQRankSum=11.711;DP=6345;DS;FS=4.580;HRun=1;HaplotypeScore=1906.5493;InbreedingCoeff=-0.1658;MQ=28.27;MQ0=344;MQRankSum=0.699;QD=4.02;ReadPosRankSum=3.929;VQSLOD=-0.5431;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:248,2:212:99:0,108,1872	0/1:144,47:162:99:1027,0,770	0/0:82,0:16:35.23:0,35,496	0/0:95,0:22:63.08:0,63,746	0/1:181,67:210:99:764,0,978	0/0:250,0:210:99:0,260,3323	0/0:250,0:185:99:0,218,2707	0/0:250,0:125:99:0,174,2027	0/0:250,0:196:99:0,192,2284	0/0:234,16:186:99:0,113,2418	0/1:178,72:209:99:1329,0,792	0/0:250,0:199:99:0,259,3194	0/0:250,0:208:99:0,307,3958	0/0:250,0:201:99:0,250,3142	0/0:250,0:190:99:0,286,3591	0/0:250,0:207:99:0,383,4798	0/0:250,0:202:99:0,188,2293	0/0:249,1:198:99:0,232,2871	0/0:250,0:138:99:0,208,2228	0/1:188,59:210:99:1312,0,1185	0/0:152,4:115:58.40:0,58,961	0/1:198,50:208:99:629,0,1413	0/1:166,81:219:99:913,0,859	0/0:173,1:143:99:0,117,1474	0/1:163,83:217:99:1395,0,1028	0/0:246,4:187:99:0,228,3378	0/0:250,0:211:99:0,301,3775	0/1:134,8:110:14.39:14,0,1484
chr10	21424326	.	A	AC	34242.15	PASS	AB=0.804;AC=25;AF=0.446;AN=56;BaseQRankSum=25.768;DP=5676;DS;FS=78.699;HRun=1;HaplotypeScore=1261.7222;InbreedingCoeff=-0.7939;MQ=29.65;MQ0=186;MQRankSum=-19.445;QD=6.63;ReadPosRankSum=-15.740;VQSLOD=0.4261;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:169,81:207:99:2199,0,1976	0/1:104,8:99:99:237,0,1947	0/0:141,0:20:57.08:0,57,719	0/0:201,0:17:51.10:0,51,635	0/1:158,22:160:99:519,0,2036	0/1:166,62:184:99:1429,0,2177	0/1:174,74:197:99:1202,0,2626	0/1:184,64:138:99:1737,0,416	0/1:153,94:208:99:2013,0,1531	0/1:217,13:182:5.57:6,0,4073	0/1:144,15:145:99:273,0,2699	0/1:157,54:163:99:1221,0,2135	0/1:146,40:166:99:743,0,2565	0/1:135,63:166:99:1411,0,1955	0/1:138,59:166:99:538,0,2532	0/1:127,45:143:99:847,0,2366	0/1:155,91:219:99:3134,0,1994	0/1:146,102:224:99:3771,0,2177	0/1:190,59:175:99:3201,0,773	0/0:152,13:145:52.56:0,53,3632	0/1:167,83:228:99:1947,0,3002	0/1:136,25:139:99:490,0,1789	0/1:134,25:140:99:616,0,2259	0/1:122,82:183:99:1523,0,1648	0/1:109,25:122:99:686,0,2156	0/1:171,75:202:99:2279,0,1639	0/1:189,32:194:99:899,0,2855	0/1:111,32:135:99:1318,0,2047
chr10	21424391	.	GAA	G	6221.25	PASS	AB=0.765;AC=10;AF=0.179;AN=56;BaseQRankSum=5.659;DP=6449;DS;FS=91.476;HRun=2;HaplotypeScore=1931.4009;InbreedingCoeff=-0.2174;MQ=31.74;MQ0=111;MQRankSum=-7.159;QD=2.70;ReadPosRankSum=10.831;VQSLOD=-0.7304;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:248,2:217:99:0,365,6618	0/1:131,85:200:99:715,0,1228	0/0:103,0:20:60.21:0,60,1205	0/0:113,0:43:99:0,113,2015	0/1:161,86:235:99:436,0,759	0/0:248,1:215:99:0,412,7491	0/0:240,4:193:99:0,352,6782	0/0:248,0:137:99:0,272,5338	0/0:246,3:224:99:0,485,8840	0/1:188,61:220:99:736,0,1601	0/1:181,63:225:99:359,0,1257	0/0:248,0:215:99:0,492,9078	0/0:247,0:229:99:0,437,8001	0/0:244,0:218:99:0,442,8072	0/0:246,0:214:99:0,424,7912	0/0:249,0:217:99:0,452,8220	0/0:248,2:226:99:0,424,8321	0/0:248,1:229:99:0,434,8795	0/0:249,0:154:99:0,282,5000	0/1:151,87:219:99:694,0,1415	0/0:213,0:183:99:0,364,6103	0/1:150,94:223:99:978,0,446	0/1:165,80:226:99:644,0,1478	0/0:217,2:199:99:0,222,4231	0/1:154,94:235:99:945,0,1269	0/1:198,48:219:99:542,0,4608	0/0:244,5:233:99:0,315,6807	0/1:94,21:109:99:173,0,1934
chr10	21424405	.	AT	A	18947.95	PASS	AB=0.883;AC=26;AF=0.464;AN=56;BaseQRankSum=1.599;DP=5470;DS;FS=155.532;HRun=1;HaplotypeScore=1419.7275;InbreedingCoeff=-0.8712;MQ=30.18;MQ0=51;MQRankSum=-7.250;QD=3.54;ReadPosRankSum=9.610;VQSLOD=-0.1230;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:183,5:175:99:881,0,1433	0/1:104,57:164:99:322,0,1096	0/0:45,7:16:11.02:0,11,579	0/0:58,3:29:41.90:0,42,750	0/1:100,98:196:99:433,0,728	0/1:166,5:210:99:1235,0,1076	0/1:153,5:127:99:490,0,1105	0/1:161,0:91:99:156,0,1247	0/1:157,14:220:99:1262,0,1137	0/1:100,32:184:99:1153,0,455	0/1:125,81:198:99:295,0,788	0/1:178,2:206:99:1022,0,1692	0/1:191,1:216:99:876,0,1724	0/1:193,4:210:99:1079,0,1727	0/1:181,4:208:99:1131,0,1557	0/1:181,3:208:99:1198,0,1523	0/1:181,16:192:99:1076,0,1216	0/1:181,18:199:99:911,0,1812	0/1:216,10:141:99:350,0,1749	0/1:157,77:218:99:343,0,1457	0/1:139,12:127:65.96:66,0,1772	0/1:98,73:193:99:427,0,554	0/1:117,96:193:99:582,0,903	0/1:144,12:144:99:496,0,307	0/1:100,87:177:99:767,0,788	0/1:125,40:191:99:1034,0,880	0/1:114,12:224:99:1018,0,529	0/1:65,17:101:99:343,0,624
chr10	21424504	.	A	ATTT	9023.37	PASS	AB=0.560;AC=31;AF=0.554;AN=56;BaseQRankSum=-5.052;DP=402;FS=0.456;HRun=9;HaplotypeScore=77.3311;InbreedingCoeff=0.9229;MQ=60.56;MQ0=0;MQRankSum=-4.643;QD=42.36;ReadPosRankSum=-1.066;VQSLOD=4.7357;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:57.07:0,57,695	0/0:5,0:5:15.05:0,15,189	0/0:9,0:9:16.59:0,17,161	0/0:11,0:10:16.42:0,16,202	1/1:6,15:21:51.17:962,51,0	1/1:4,13:17:36.12:709,36,0	1/1:5,11:16:27.09:532,27,0	1/1:6,6:14:24.06:422,24,0	1/1:1,9:11:27.09:521,27,0	0/0:21,0:21:60.19:0,60,750	0/0:17,0:17:48.10:0,48,584	1/1:2,15:18:48.16:899,48,0	1/1:3,15:18:42.14:827,42,0	1/1:4,12:16:39.13:757,39,0	0/0:19,0:19:48.09:0,48,598	0/0:16,0:16:45.14:0,45,568	0/0:22,0:22:54.11:0,54,651	1/1:2,4:6:18.06:317,18,0	0/0:14,0:14:27.06:0,27,336	0/0:21,0:21:63.20:0,63,796	0/0:9,0:9:27.08:0,27,335	1/1:2,6:8:21.07:403,21,0	1/1:5,9:15:36.12:661,36,0	1/1:1,2:4:3.01:39,3,0	1/1:9,8:17:36.10:617,36,0	0/1:3,10:14:1.79:598,0,2	1/1:2,6:9:21.07:403,21,0	1/1:3,6:9:18.53:356,19,0
chr10	21425969	.	AT	A	2109.89	PASS	AB=0.820;AC=16;AF=0.286;AN=56;BaseQRankSum=8.315;DP=607;FS=2.780;HRun=13;HaplotypeScore=73.7170;InbreedingCoeff=0.5623;MQ=71.74;MQ0=1;MQRankSum=0.485;QD=9.63;ReadPosRankSum=2.708;VQSLOD=3.3315;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,2:29:13.79:0,14,437	1/1:3,10:13:0.65:168,1,0	0/1:19,0:16:21.19:21,0,41	0/1:18,0:14:27.98:35,0,28	0/0:40,0:41:92.87:0,93,858	0/0:15,0:15:40.87:0,41,380	0/0:13,0:14:35.88:0,36,330	0/0:29,1:31:41:0,41,532	0/0:9,0:9:24.03:0,24,229	1/1:6,15:21:38.64:281,39,0	1/1:7,23:30:27.33:364,27,0	0/0:13,1:14:4.96:0,5,192	0/0:23,2:26:9.34:0,9,412	0/0:28,1:29:50.06:0,50,601	0/0:14,1:15:11.12:0,11,261	1/1:4,19:24:13.27:351,13,0	0/1:9,12:21:22.59:183,0,23	0/0:12,0:12:21.02:0,21,198	0/1:9,11:20:16.66:221,0,17	1/1:9,29:40:54.90:550,55,0	1/1:5,7:13:18.97:121,19,0	0/0:22,0:25:58.92:0,59,568	0/0:29,0:30:65.96:0,66,622	0/0:19,0:19:44.53:0,45,410	0/0:19,1:20:19.98:0,20,338	0/0:17,1:22:31.89:0,32,425	0/0:23,0:23:45.03:0,45,416	0/0:12,1:14:13.96:0,14,274
chr10	21427329	.	GTGTGTGTGTGTGTGTGTGTGTT	G	5349.05	PASS	AB=1.000;AC=34;AF=0.654;AN=52;BaseQRankSum=1.514;DP=601;FS=8.861;HRun=0;HaplotypeScore=275.3338;InbreedingCoeff=0.6282;MQ=53.93;MQ0=15;MQRankSum=-3.432;QD=14.23;ReadPosRankSum=2.451;VQSLOD=1.5210;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:33.87:0,34,2851	0/0:10,0:9:24:0,24,1365	./.	./.	1/1:13,24:37:9.03:493,9,0	1/1:13,28:41:1.85:173,2,0	1/1:7,0:7:3.01:97,3,0	1/1:11,0:10:6.47:52,6,0	1/1:5,14:19:3.01:175,3,0	0/0:22,0:22:51.17:0,51,2627	0/1:25,0:25:4.56:5,0,738	1/1:15,0:14:4.57:121,5,0	1/1:14,2:16:17.99:596,18,0	1/1:3,21:24:6.02:350,6,0	1/1:23,0:23:18.02:248,18,0	0/0:28,0:27:54.19:0,54,3226	0/0:34,0:34:0.38:0,0,2166	0/1:20,0:19:99:179,0,145	0/0:16,0:16:18.12:0,18,465	0/0:29,0:28:13.40:0,13,1117	0/0:36,0:35:56.01:0,56,3166	1/1:14,18:31:9.03:506,9,0	1/1:13,0:13:17.99:173,18,0	1/1:19,2:20:18.05:547,18,0	1/1:7,12:19:6.02:312,6,0	1/1:8,14:21:33.92:506,34,0	1/1:5,17:22:13.15:702,13,0	1/1:9,0:7:11.96:117,12,0
chr10	21427331	.	GTGTGTGTGTGTGTGTGTGTT	G	4865.70	PASS	AB=0.976;AC=34;AF=0.630;AN=54;BaseQRankSum=2.339;DP=589;FS=11.048;HRun=0;HaplotypeScore=252.5891;InbreedingCoeff=0.6257;MQ=52.65;MQ0=16;MQRankSum=-3.120;QD=13.22;ReadPosRankSum=2.063;VQSLOD=2.3345;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:38.90:0,39,2583	0/0:10,0:9:15.86:0,16,1162	./.	0/0:13,0:7:3.01:0,3,86	1/1:37,0:37:9.03:394,9,0	1/1:41,0:41:1.95:140,2,0	1/1:6,0:6:3.01:64,3,0	1/1:10,0:9:6.47:52,6,0	1/1:19,0:19:3.01:142,3,0	0/0:22,0:22:50.66:0,51,2209	0/1:24,0:24:3.89:4,0,637	1/1:4,12:15:4.57:166,5,0	1/1:16,0:16:17.97:492,18,0	1/1:24,0:24:6.49:285,6,0	1/1:23,0:23:18.06:404,18,0	0/0:26,0:25:54.19:0,54,2771	0/0:32,0:32:0.33:0,0,1811	0/1:19,1:19:14.67:385,0,15	0/0:16,0:16:17.41:0,17,395	0/0:30,0:29:13.31:0,13,940	0/0:34,0:33:55.80:0,56,2712	1/1:31,0:30:9.03:426,9,0	1/1:12,0:12:17.98:148,18,0	1/1:20,1:20:18.01:470,18,0	1/1:17,0:17:6.02:246,6,0	1/1:20,0:19:34.31:385,34,0	1/1:22,0:21:13.13:571,13,0	1/1:9,0:7:11.94:92,12,0
chr10	21427335	.	GTGTGTGTGTGTGTGTT	G	4577.83	PASS	AB=1.000;AC=37;AF=0.685;AN=54;BaseQRankSum=1.306;DP=594;FS=9.056;HRun=0;HaplotypeScore=222.2337;InbreedingCoeff=0.6180;MQ=51.94;MQ0=18;MQRankSum=-1.928;QD=10.62;ReadPosRankSum=0.074;VQSLOD=2.4078;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:30:39.70:0,40,1881	0/0:10,0:9:15.86:0,16,808	./.	0/0:14,0:5:6.01:0,6,61	1/1:37,0:37:9.03:310,9,0	1/1:40,0:40:2.69:113,3,0	1/1:7,0:7:6.01:61,6,0	1/1:9,0:8:6.47:52,6,0	1/1:18,0:18:3.01:114,3,0	0/0:22,0:22:36.31:0,36,1370	0/1:25,0:25:3.42:3,0,434	1/1:16,0:15:4.57:119,5,0	1/1:18,0:18:20.97:432,21,0	1/1:24,0:24:6.02:229,6,0	1/1:6,19:25:18.06:769,18,0	0/0:26,0:25:42.42:0,42,1841	0/1:30,0:30:23.97:24,0,1120	1/1:22,0:21:17.10:402,17,0	0/0:16,0:16:10.10:0,10,235	0/1:35,0:34:2.20:2,0,613	0/0:34,0:33:19.96:0,20,1816	1/1:28,0:27:9.03:342,9,0	1/1:11,0:11:17.97:148,18,0	1/1:19,0:18:17.96:362,18,0	1/1:16,0:16:6.02:190,6,0	1/1:20,0:19:34.56:353,35,0	1/1:23,0:22:13.55:461,14,0	1/1:8,0:6:11.94:92,12,0
chr10	21427347	.	GTGTT	G	4554.79	PASS	AB=1.000;AC=50;AF=0.893;AN=56;BaseQRankSum=4.305;DP=594;FS=1.380;HRun=0;HaplotypeScore=144.4682;InbreedingCoeff=0.3527;MQ=50.99;MQ0=16;MQRankSum=2.570;QD=8.30;ReadPosRankSum=3.029;VQSLOD=4.1467;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:31:17.29:0,17,516	1/1:10,0:10:25.07:219,25,0	0/0:13,0:3:3.01:0,3,31	0/1:13,0:4:15.87:17,0,16	1/1:31,0:31:8.93:73,9,0	1/1:36,0:36:3.01:31,3,0	1/1:10,0:10:6.46:50,6,0	1/1:17,0:16:35.83:285,36,0	1/1:14,0:14:3.01:31,3,0	1/1:24,0:23:14.22:245,14,0	1/1:8,15:23:11.08:204,11,0	1/1:15,0:15:4.56:35,5,0	1/1:23,0:22:29.90:249,30,0	1/1:21,0:21:6.48:62,6,0	1/1:21,0:21:17.99:180,18,0	1/1:25,0:24:57.95:445,58,0	1/1:33,0:33:41.05:412,41,0	1/1:20,0:19:43.77:321,44,0	0/1:17,0:17:62.96:63,0,78	1/1:34,0:33:17.14:127,17,0	1/1:32,0:31:23.93:309,24,0	1/1:23,0:22:9.02:91,9,0	1/1:19,0:19:38.92:315,39,0	1/1:24,0:23:26.84:215,27,0	1/1:15,0:14:5.96:49,6,0	1/1:18,0:17:34.12:267,34,0	1/1:20,0:19:13.34:126,13,0	1/1:11,0:8:17.87:134,18,0
chr10	21427349	.	GTT	G	3536.42	PASS	AB=0.886;AC=50;AF=0.893;AN=56;BaseQRankSum=3.949;DP=586;FS=3.247;HRun=3;HaplotypeScore=135.4181;InbreedingCoeff=0.2856;MQ=51.00;MQ0=16;MQRankSum=3.372;QD=6.54;ReadPosRankSum=3.083;VQSLOD=0.5664;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:3.57:0,4,337	1/1:11,0:11:26.85:134,27,0	0/0:13,0:3:3.01:0,3,31	0/1:14,0:5:12.85:30,0,13	1/1:28,0:28:8.77:50,9,0	1/1:34,0:34:2.92:17,3,0	1/1:10,0:10:5.85:49,6,0	1/1:17,0:16:35.83:285,36,0	1/1:14,0:14:2.92:17,3,0	1/1:25,0:24:16.27:208,16,0	1/1:23,0:23:10.56:79,11,0	1/1:14,0:14:4.48:21,4,0	1/1:20,0:19:29.65:207,30,0	1/1:21,0:21:6.32:34,6,0	1/1:21,0:21:17.65:109,18,0	1/1:26,0:25:59.95:313,60,0	1/1:32,0:32:40.24:242,40,0	1/1:19,0:18:43.91:305,44,0	0/1:12,5:17:31.14:31,0,88	1/1:34,0:33:16.54:96,17,0	1/1:32,0:31:26.43:248,26,0	1/1:22,0:21:8.62:49,9,0	1/1:19,0:19:38.92:315,39,0	1/1:25,0:24:29.62:210,30,0	1/1:15,0:14:5.88:35,6,0	1/1:17,0:16:33.68:252,34,0	1/1:20,0:19:12.77:69,13,0	1/1:11,0:8:17.85:134,18,0
chr10	21427350	.	TTTG	T	757.79	PASS	AB=0.921;AC=26;AF=0.464;AN=56;BaseQRankSum=9.222;DP=562;FS=7.145;HRun=0;HaplotypeScore=143.5858;InbreedingCoeff=0.2222;MQ=51.45;MQ0=16;MQRankSum=-5.070;QD=2.03;ReadPosRankSum=8.425;VQSLOD=0.7505;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:63.69:0,64,1006	0/1:8,3:11:24.85:52,0,25	0/0:13,0:2:3.01:0,3,66	0/0:14,0:5:15:0,15,170	1/1:24,0:24:1.16:29,1,0	1/1:28,0:28:2.97:20,3,0	0/0:10,0:10:4.81:0,5,21	0/0:14,0:13:33.61:0,34,167	1/1:14,0:14:2.97:20,3,0	0/0:24,1:24:0.33:0,0,227	1/1:19,4:23:13.67:123,14,0	1/1:13,0:13:4.52:25,5,0	0/1:20,0:19:34.49:34,0,69	1/1:21,0:21:5.94:41,6,0	1/1:21,0:21:15.72:102,16,0	0/1:21,5:25:80.30:102,0,80	0/1:28,4:32:65.24:110,0,65	0/0:19,0:18:19.79:0,20,207	0/0:16,1:17:17.90:0,18,346	0/1:30,3:32:51.34:94,0,51	0/1:30,2:31:14.05:14,0,150	1/1:20,0:19:8.92:61,9,0	0/0:19,0:19:33.73:0,34,162	0/1:24,0:23:11.91:12,0,97	0/1:13,0:12:9.53:15,0,10	0/0:15,0:14:10.88:0,11,126	1/1:18,0:17:11.64:82,12,0	0/0:11,0:8:17.24:0,17,94
chr10	21427351	.	TTG	T	2550.66	PASS	AB=1.000;AC=38;AF=0.679;AN=56;BaseQRankSum=5.384;DP=577;FS=1.590;HRun=0;HaplotypeScore=134.4844;InbreedingCoeff=0.3406;MQ=51.58;MQ0=16;MQRankSum=-0.498;QD=5.45;ReadPosRankSum=5.039;VQSLOD=3.0122;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:39.73:0,40,547	1/1:11,0:11:21.06:240,21,0	0/0:14,0:2:3.01:0,3,47	0/0:15,0:6:14.56:0,15,117	1/1:24,0:24:5.34:23,5,0	1/1:28,0:28:2.84:14,3,0	0/1:10,0:10:0:0,0,0	0/0:16,0:15:6:0,6,52	1/1:14,0:14:2.84:14,3,0	1/1:13,12:24:6.56:389,7,0	1/1:23,0:23:20.56:197,21,0	0/1:15,0:15:7.32:7,0,37	1/1:20,0:19:8.43:42,8,0	0/1:23,0:23:15.98:16,0,31	0/1:22,0:22:6.46:51,0,6	1/1:27,0:26:53.28:556,53,0	1/1:20,12:32:20.62:239,21,0	0/1:20,0:19:9.58:10,0,17	1/1:17,0:17:8.99:104,9,0	1/1:15,18:32:52.86:364,53,0	1/1:32,0:31:32.48:320,32,0	1/1:20,0:19:8.52:41,9,0	0/0:19,0:19:1.73:0,2,23	1/1:24,0:23:5.12:26,5,0	1/1:13,0:12:2.84:14,3,0	1/1:15,0:14:2.84:14,3,0	0/1:20,0:19:24.73:37,0,25	0/0:13,0:10:5.97:0,6,45
chr10	21427832	.	CTG	C	8297.19	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=16.403;DP=845;FS=0.609;HRun=0;HaplotypeScore=101.3333;InbreedingCoeff=0.9997;MQ=86.88;MQ0=2;MQRankSum=-7.656;QD=36.39;ReadPosRankSum=1.980;VQSLOD=6.8985;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:58:99:0,175,3097	1/1:1,13:14:36.12:515,36,0	0/0:25,0:25:30.88:0,31,1063	0/0:33,0:33:90.24:0,90,1540	0/0:36,0:36:99:0,105,1809	0/0:27,0:27:81.28:0,81,1476	0/0:32,0:32:90.29:0,90,1619	0/0:25,0:25:72.24:0,72,1284	0/0:31,0:31:84.27:0,84,1483	1/1:1,19:20:57.19:815,57,0	1/1:1,27:28:81.10:1068,81,0	0/0:41,0:41:99:0,111,2033	0/0:32,0:32:93.32:0,93,1692	0/0:28,0:28:84.26:0,84,1471	0/0:46,0:46:99:0,132,2266	1/1:3,32:34:59.32:1135,59,0	1/1:1,26:27:69.23:988,69,0	0/0:11,0:11:33.11:0,33,605	1/1:4,25:29:75.18:985,75,0	1/1:1,33:33:87.29:1246,87,0	1/1:2,39:41:99:1544,108,0	0/0:28,0:28:81.28:0,81,1473	0/0:22,0:22:63.19:0,63,1094	0/0:25,0:25:75.26:0,75,1374	0/0:21,0:21:60.21:0,60,1100	0/0:43,0:43:99:0,126,2275	0/0:44,0:44:99:0,132,2412	0/0:9,0:9:27.09:0,27,495
chr10	21428347	.	TA	T	4629.84	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=13.926;DP=548;FS=8.277;HRun=9;HaplotypeScore=53.7794;InbreedingCoeff=0.9883;MQ=67.86;MQ0=0;MQRankSum=0.294;QD=21.84;ReadPosRankSum=1.134;VQSLOD=5.3846;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:72.14:0,72,794	1/1:0,8:8:21.01:192,21,0	0/0:7,0:7:11.94:0,12,113	0/0:5,0:6:11.06:0,11,102	1/1:3,23:26:62.94:566,63,0	0/0:26,0:25:75.21:0,75,855	0/0:14,0:14:39.10:0,39,438	0/0:40,0:40:96.24:0,96,1074	0/0:18,0:18:54.08:0,54,605	1/1:5,22:27:66:595,66,0	1/1:2,33:35:86.95:785,87,0	0/0:11,0:11:21.06:0,21,242	0/0:14,0:14:33.10:0,33,381	0/0:17,0:17:51.15:0,51,589	0/0:15,0:15:45.13:0,45,519	1/1:2,15:17:39.02:357,39,0	1/1:0,16:16:39.02:357,39,0	0/0:22,0:22:60.18:0,60,692	1/1:9,11:20:35.96:316,36,0	1/1:4,22:26:62.86:556,63,0	1/1:0,13:13:36.02:329,36,0	1/1:2,22:24:63.03:576,63,0	0/0:22,0:22:60.17:0,60,684	0/0:19,0:19:54.16:0,54,623	0/0:21,0:21:57.17:0,57,658	0/0:31,0:31:87.25:0,87,997	0/0:17,0:17:45.12:0,45,510	0/0:10,0:10:30.09:0,30,346
chr10	21429723	.	CACACACACACACA	C	3192.14	PASS	AB=0.856;AC=11;AF=0.196;AN=56;BaseQRankSum=8.351;DP=475;FS=14.179;HRun=0;HaplotypeScore=181.0087;InbreedingCoeff=-0.2528;MQ=52.10;MQ0=22;MQRankSum=-5.953;QD=19.11;ReadPosRankSum=4.579;VQSLOD=1.7882;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:23:48.84:0,49,993	0/0:6,0:6:17.53:0,18,660	0/0:23,0:5:15.03:0,15,181	0/0:32,0:10:26.75:0,27,289	0/1:19,0:19:74.85:75,0,359	0/1:8,3:10:21.71:287,0,22	0/1:5,0:5:16.61:24,0,17	0/0:23,0:22:54.86:0,55,248	0/1:8,4:13:52.98:348,0,53	0/0:30,0:30:82.87:0,83,1655	0/0:19,0:19:50.91:0,51,2044	0/1:11,3:13:43.13:459,0,43	0/1:12,6:17:70.76:524,0,71	0/1:14,4:18:53.04:556,0,53	0/0:13,0:13:6.91:0,7,339	0/0:20,0:20:45.89:0,46,1503	0/0:31,0:31:77.74:0,78,1930	0/0:10,0:10:8.87:0,9,157	0/0:7,0:7:18.78:0,19,319	0/0:19,0:18:44.71:0,45,1445	0/0:17,0:15:29.52:0,30,967	0/0:16,0:16:13.37:0,13,1004	0/1:10,1:10:38.30:282,0,38	0/0:10,0:10:11.55:0,12,67	0/1:9,4:13:39:375,0,39	0/1:25,2:26:99:221,0,183	0/1:16,2:17:99:189,0,118	0/0:6,0:5:14.14:0,14,68
chr10	21429736	.	A	ACC	7394.05	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-4.292;DP=487;FS=4.721;HRun=2;HaplotypeScore=103.8284;InbreedingCoeff=0.8720;MQ=61.51;MQ0=15;MQRankSum=-2.609;QD=17.16;ReadPosRankSum=-0.184;VQSLOD=2.1914;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:20:34.14:296,34,0	1/1:7,0:7:5.58:96,6,0	0/0:23,0:7:17.95:0,18,167	0/0:33,0:14:29.86:0,30,300	1/1:1,15:17:29.69:234,30,0	1/1:11,0:12:21.05:137,21,0	1/1:9,0:9:26.01:210,26,0	1/1:28,0:27:71.94:637,72,0	1/1:16,0:16:37.94:289,38,0	1/1:25,0:25:61.01:572,61,0	1/1:16,0:16:27.89:258,28,0	1/1:16,0:15:36.39:243,36,0	1/1:20,0:19:41.05:287,41,0	1/1:19,0:19:35.68:279,36,0	1/1:0,0:16:6.91:80,7,0	1/1:20,0:20:24.77:318,25,0	1/1:23,0:23:28.03:346,28,0	1/1:10,0:10:29.87:237,30,0	1/1:9,0:9:16.33:205,16,0	1/1:15,0:14:32.54:269,33,0	1/1:19,0:18:30.42:253,30,0	1/1:15,0:15:26.96:258,27,0	1/1:16,0:15:37.44:275,37,0	1/1:10,0:10:11.66:89,12,0	1/1:17,0:17:43.47:337,43,0	1/1:26,0:26:72.72:604,73,0	1/1:22,0:22:34.62:432,35,0	1/1:6,0:6:17.99:154,18,0
chr10	21431538	.	C	CA	394.78	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=4.739;DP=515;FS=0.544;HRun=1;HaplotypeScore=111.3263;InbreedingCoeff=0.2949;MQ=72.34;MQ0=1;MQRankSum=-5.267;QD=4.29;ReadPosRankSum=1.664;VQSLOD=0.3907;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,16:25:37.69:414,38,0	0/0:6,0:6:18.06:0,18,251	0/0:34,0:23:23.96:0,24,502	0/0:21,1:15:15.15:0,15,358	0/0:17,0:17:48.15:0,48,651	0/0:17,0:17:31.99:0,32,195	0/0:21,0:21:35.33:0,35,197	0/0:15,0:15:30.34:0,30,140	0/0:15,0:15:30.95:0,31,197	0/0:22,0:22:60.20:0,60,840	0/0:19,0:19:51.13:0,51,684	0/0:9,0:9:11.01:0,11,40	0/1:18,0:18:6.20:6,0,67	0/0:18,0:18:18.99:0,19,127	0/0:22,0:22:60.20:0,60,822	0/0:10,0:10:24.08:0,24,334	0/0:27,0:27:66.20:0,66,877	0/0:22,0:22:33:0,33,160	0/0:20,0:19:54.18:0,54,744	0/0:20,0:20:57.18:0,57,773	0/0:10,0:10:30.10:0,30,408	0/0:9,0:9:4.33:0,4,309	0/1:16,0:16:19.17:19,0,132	0/0:16,0:16:28.36:0,28,152	0/1:33,0:33:74.49:74,0,86	0/0:22,0:22:37.25:0,37,212	0/0:17,0:17:4.07:0,4,51	0/0:12,0:12:25.48:0,25,105
chr10	21431539	.	G	GC	8041.29	PASS	AB=0.798;AC=30;AF=0.536;AN=56;BaseQRankSum=-0.801;DP=545;FS=1.618;HRun=6;HaplotypeScore=96.1747;InbreedingCoeff=0.8710;MQ=72.28;MQ0=1;MQRankSum=-2.718;QD=26.28;ReadPosRankSum=1.444;VQSLOD=4.9283;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:26:45.49:513,45,0	0/0:7,0:7:15.03:0,15,153	0/0:34,0:24:5.13:0,5,248	0/0:23,0:15:11.82:0,12,105	0/0:17,0:17:48:0,48,461	1/1:5,12:17:45.13:554,45,0	1/1:5,19:24:48.13:589,48,0	1/1:4,17:21:45.96:503,46,0	0/1:9,7:16:0.49:308,0,0	0/0:24,0:24:66.09:0,66,649	0/0:19,0:19:48.05:0,48,470	1/1:2,9:11:18.06:225,18,0	1/1:2,18:20:33.10:411,33,0	1/1:2,16:18:42.12:515,42,0	0/0:22,0:22:57.10:0,57,573	0/0:10,0:10:24.05:0,24,241	0/0:29,0:29:60.91:0,61,526	1/1:4,21:25:56.54:687,57,0	0/0:22,0:21:50.42:0,50,477	0/0:21,0:21:51.07:0,51,501	0/0:10,0:10:30.06:0,30,303	0/1:8,1:9:10.14:10,0,210	1/1:9,7:16:42.10:499,42,0	1/1:5,11:16:45.14:557,45,0	1/1:7,27:34:90.27:1116,90,0	1/1:4,19:23:60.18:740,60,0	1/1:2,15:17:36.09:436,36,0	1/1:0,13:13:30.10:377,30,0
chr10	21431547	.	C	CA	3035.90	PASS	AB=0.803;AC=22;AF=0.393;AN=56;BaseQRankSum=-7.922;DP=581;FS=6.751;HRun=13;HaplotypeScore=122.0004;InbreedingCoeff=0.8014;MQ=72.03;MQ0=1;MQRankSum=-1.699;QD=11.37;ReadPosRankSum=-0.539;VQSLOD=2.3513;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:24:15.78:0,16,203	1/1:4,5:9:11.93:101,12,0	0/1:30,3:23:18.32:18,0,47	0/0:21,0:13:5.51:0,6,42	1/1:5,0:22:49.22:281,49,0	0/0:16,0:16:12.14:0,12,170	0/0:22,0:22:27.01:0,27,258	0/0:29,0:31:63.97:0,64,426	0/0:14,0:14:30.58:0,31,188	1/1:5,16:27:29.44:362,29,0	1/1:6,16:22:38.95:345,39,0	0/0:12,0:12:14.91:0,15,148	0/0:18,0:19:17.11:0,17,171	0/0:20,0:20:15.29:0,15,137	0/0:19,1:20:21.02:0,21,284	0/1:6,5:11:20.16:111,0,20	1/1:5,27:34:56.07:538,56,0	0/0:24,0:24:53.64:0,54,348	1/1:7,15:24:56.43:459,56,0	1/1:4,15:23:26.07:362,26,0	1/1:8,2:12:13.85:126,14,0	1/1:5,2:12:23.21:147,23,0	0/0:15,0:15:10.93:0,11,123	0/0:17,0:19:9.08:0,9,141	1/1:36,0:36:42.90:401,43,0	0/0:23,0:24:33.65:0,34,273	0/0:18,0:18:23.27:0,23,158	0/0:15,0:15:22.75:0,23,145
chr10	21431560	.	A	AC	3142.02	PASS	AB=1.000;AC=28;AF=0.500;AN=56;BaseQRankSum=4.518;DP=569;FS=22.279;HRun=1;HaplotypeScore=110.9781;InbreedingCoeff=0.7778;MQ=74.50;MQ0=1;MQRankSum=-0.992;QD=9.73;ReadPosRankSum=4.667;VQSLOD=0.0225;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:46.84:0,47,511	0/0:8,0:8:1.12:0,1,45	0/0:26,0:21:34.64:0,35,364	0/0:15,0:13:26.76:0,27,233	0/0:18,0:18:27.42:0,27,152	1/1:14,2:16:31.25:202,31,0	1/1:25,1:26:44.71:294,45,0	1/1:30,1:31:28.53:275,29,0	0/1:14,0:14:18.06:92,0,18	0/0:28,0:28:42.98:0,43,330	0/0:22,0:22:10.43:0,10,149	1/1:13,0:13:15:120,15,0	1/1:22,0:23:13.17:137,13,0	1/1:16,0:16:29.91:224,30,0	0/0:17,0:17:47.74:0,48,599	0/0:9,0:9:2.82:0,3,75	0/1:33,0:33:38.62:39,0,105	1/1:27,1:28:23.19:134,23,0	0/0:26,0:25:18.05:0,18,222	0/0:24,0:24:11.93:0,12,202	0/0:14,0:14:20.42:0,20,146	0/0:13,0:13:26.41:0,26,180	1/1:12,1:13:24.87:160,25,0	1/1:16,1:17:32.06:221,32,0	1/1:6,28:36:77.23:954,77,0	1/1:23,1:25:12.31:233,12,0	1/1:19,0:19:23.24:188,23,0	1/1:13,0:13:16.56:86,17,0
chr10	21432549	.	TA	T	3209.03	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=13.231;DP=548;FS=15.169;HRun=9;HaplotypeScore=53.4077;InbreedingCoeff=0.8959;MQ=76.78;MQ0=0;MQRankSum=-0.613;QD=18.99;ReadPosRankSum=0.305;VQSLOD=2.4687;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:69.14:0,69,758	1/1:1,9:10:23.97:211,24,0	0/1:15,0:14:2.85:3,0,129	0/0:12,0:10:5.98:0,6,54	0/0:36,0:36:96.26:0,96,1087	0/0:24,0:24:69.20:0,69,788	0/0:16,0:16:45.12:0,45,509	0/0:22,0:22:60.16:0,60,676	0/0:27,0:27:75.21:0,75,856	1/1:1,18:19:54:485,54,0	1/1:0,22:22:59.98:541,60,0	0/0:17,0:17:42.12:0,42,485	0/0:18,0:18:51.08:0,51,554	0/0:21,0:21:54.11:0,54,596	0/0:9,0:9:27.08:0,27,312	1/1:2,17:19:45.02:412,45,0	1/1:4,23:27:44.25:564,44,0	0/0:17,0:17:51.15:0,51,589	1/1:3,17:20:47.73:429,48,0	1/1:5,21:26:54.01:494,54,0	1/1:0,11:11:30.02:275,30,0	0/0:17,0:17:42.12:0,42,484	0/0:22,0:22:57.16:0,57,644	0/0:16,0:16:39.12:0,39,450	0/0:19,0:19:51.14:0,51,579	0/0:17,2:19:2.23:0,2,525	0/0:29,0:29:72.19:0,72,810	0/0:13,0:13:39.11:0,39,449
chr10	21433401	.	TA	T	3849.52	PASS	AB=0.895;AC=21;AF=0.375;AN=56;BaseQRankSum=11.467;DP=568;FS=3.065;HRun=10;HaplotypeScore=61.4164;InbreedingCoeff=0.9172;MQ=72.28;MQ0=0;MQRankSum=-1.394;QD=19.06;ReadPosRankSum=2.344;VQSLOD=4.7059;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:74.27:0,74,759	1/1:4,6:10:17.99:156,18,0	0/0:11,0:9:10.79:0,11,134	0/1:14,2:16:11.89:12,0,70	1/1:5,23:28:62.81:529,63,0	0/0:18,0:18:45.08:0,45,477	0/0:16,0:16:45.12:0,45,498	0/0:35,1:36:52.13:0,52,792	0/0:19,2:21:31.10:0,31,571	1/1:4,12:16:35.99:313,36,0	1/1:3,21:25:60.95:497,61,0	0/0:23,0:23:57.13:0,57,615	0/0:13,0:13:36.08:0,36,383	0/0:19,0:19:48.13:0,48,531	0/0:20,0:20:48.13:0,48,531	1/1:4,13:17:35.98:312,36,0	1/1:3,19:22:53.71:468,54,0	0/0:19,0:19:51.10:0,51,538	1/1:1,10:11:29.98:260,30,0	1/1:2,20:22:56.98:495,57,0	1/1:1,14:15:38.99:338,39,0	1/1:1,18:19:53.99:469,54,0	0/0:33,1:34:55.15:0,55,820	0/0:18,0:18:51.11:0,51,548	0/0:18,1:19:31.09:0,31,563	0/0:26,1:27:37.08:0,37,625	0/0:29,1:30:53.03:0,53,796	0/0:12,1:15:12.59:0,13,316
chr10	21433675	.	CT	C	1836.14	PASS	AB=0.711;AC=25;AF=0.446;AN=56;BaseQRankSum=2.571;DP=582;FS=9.529;HRun=16;HaplotypeScore=71.3619;InbreedingCoeff=0.2429;MQ=68.39;MQ0=2;MQRankSum=0.988;QD=4.84;ReadPosRankSum=6.475;VQSLOD=1.1912;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,22:29:5.84:193,6,0	0/0:8,0:9:19.95:0,20,143	0/0:18,1:14:3.50:0,3,102	0/1:14,0:11:12.02:12,0,18	0/0:17,0:31:36.99:0,37,296	0/1:15,5:23:3.59:107,0,4	1/1:3,12:16:25.53:149,26,0	0/1:13,18:31:16.63:217,0,17	1/1:11,8:19:3.54:134,4,0	0/0:19,0:20:19.20:0,19,149	0/0:13,0:15:23.73:0,24,173	0/1:8,13:21:4.66:87,0,5	0/1:10,8:19:23.50:73,0,24	1/1:9,11:20:16.69:106,17,0	1/1:5,0:20:28.45:82,28,0	0/0:19,2:23:26.55:0,27,297	0/0:19,1:21:26.80:0,27,212	0/1:9,14:23:8.42:127,0,8	0/1:16,1:17:0.03:0,0,108	0/0:18,0:19:29.79:0,30,236	0/0:18,3:21:8.91:0,9,176	0/0:10,0:24:40.78:0,41,243	0/1:10,12:22:24.43:99,0,24	1/1:9,10:19:20.41:126,20,0	0/1:10,13:23:43.05:111,0,43	0/1:15,15:30:8.09:160,0,8	1/1:10,14:24:29.14:179,29,0	0/1:3,4:7:10.43:57,0,10
chr10	21434044	.	ATG	A	5934.90	PASS	AB=0.941;AC=21;AF=0.375;AN=56;BaseQRankSum=-7.821;DP=914;FS=1.868;HRun=0;HaplotypeScore=170.5353;InbreedingCoeff=0.9372;MQ=56.17;MQ0=9;MQRankSum=6.315;QD=21.27;ReadPosRankSum=4.524;VQSLOD=5.3770;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:45:78.18:0,78,802	1/1:3,10:14:32.93:374,33,0	0/0:53,0:28:22.33:0,22,323	0/0:51,0:27:37.34:0,37,510	1/1:6,28:35:82.42:950,82,0	0/0:28,0:28:66.19:0,66,763	0/0:37,0:37:90.25:0,90,1020	0/0:49,0:48:78.17:0,78,819	0/0:28,0:28:66.19:0,66,770	1/1:10,16:27:50.99:590,51,0	1/1:3,14:18:32.88:358,33,0	0/0:45,0:45:99:0,111,1291	0/0:41,0:41:86.87:0,87,1028	0/0:34,0:34:84.25:0,84,1011	0/0:20,0:44:89.23:0,89,830	1/1:10,16:26:47.98:554,48,0	1/1:7,8:14:30.09:359,30,0	0/1:15,1:16:5.89:6,0,271	1/1:10,9:19:26.91:293,27,0	1/1:3,11:15:32.93:374,33,0	1/1:12,47:60:99:1310,117,0	1/1:10,19:30:66.02:768,66,0	0/0:19,0:19:36.57:0,37,414	0/0:32,1:33:18.18:0,18,556	0/0:27,0:27:66.18:0,66,731	0/0:48,0:48:99:0,105,1188	0/0:32,1:33:48.32:0,48,905	0/0:17,0:17:33.10:0,33,408
chr10	21434112	.	CTG	C	131.11	PASS	AB=0.886;AC=5;AF=0.109;AN=46;BaseQRankSum=0.810;DP=677;FS=17.364;HRun=0;HaplotypeScore=152.1185;InbreedingCoeff=-0.1473;MQ=41.77;MQ0=102;MQRankSum=-0.206;QD=1.01;ReadPosRankSum=-0.227;VQSLOD=1.8678;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:47,1:36:59.98:0,60,868	./.	./.	./.	0/0:30,2:24:23.87:0,24,375	0/1:23,2:19:19.03:19,0,669	./.	0/0:37,3:5:12.03:0,12,174	0/1:8,6:12:77.93:166,0,78	0/0:4,0:4:3:0,3,28	0/0:6,0:6:2.60:0,3,10	0/0:43,1:34:26.25:0,26,883	0/0:41,1:38:6.99:0,7,1048	0/0:28,0:21:36.12:0,36,589	0/1:29,1:21:7.41:7,0,415	0/0:10,0:10:3.01:0,3,38	0/0:5,0:5:3.01:0,3,37	0/1:17,2:15:30.40:30,0,437	./.	0/0:8,0:7:15.84:0,16,128	0/0:24,0:23:11.21:0,11,71	0/0:28,3:26:26.92:0,27,592	0/0:26,2:15:27.09:0,27,445	0/0:38,2:33:44.12:0,44,655	0/0:19,3:17:24.06:0,24,370	0/1:39,3:26:14.88:15,0,751	0/0:24,0:22:39.13:0,39,632	0/0:13,0:13:27.09:0,27,444
chr10	21434143	.	CTG	C	5708.91	PASS	AB=0.741;AC=29;AF=0.537;AN=54;BaseQRankSum=-1.802;DP=653;FS=16.077;HRun=0;HaplotypeScore=157.4310;InbreedingCoeff=0.5611;MQ=38.07;MQ0=78;MQRankSum=1.058;QD=12.74;ReadPosRankSum=4.539;VQSLOD=3.4981;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:39,1:31:64.44:0,64,974	0/0:3,0:3:2.88:0,3,23	./.	0/0:28,0:2:5.72:0,6,33	1/1:15,10:18:20.56:195,21,0	1/1:5,13:12:30.03:355,30,0	0/1:22,14:11:2.63:133,0,3	1/1:23,21:8:18:182,18,0	1/1:6,10:14:10.41:263,10,0	0/0:9,0:9:17.61:0,18,239	0/0:12,0:12:16.16:0,16,190	1/1:15,25:30:44.05:606,44,0	1/1:7,29:35:71.24:819,71,0	1/1:12,15:20:31.72:399,32,0	0/0:37,0:29:42.42:0,42,582	0/1:11,1:12:18.22:18,0,199	0/0:7,0:7:11.96:0,12,118	0/1:10,8:15:22.47:232,0,22	0/0:5,0:3:6.02:0,6,99	0/0:11,0:11:12:0,12,168	0/0:30,0:27:22.59:0,23,580	1/1:23,10:27:25.41:335,25,0	0/1:10,14:14:19.48:287,0,19	1/1:16,14:24:35.60:347,36,0	1/1:9,11:15:23.90:259,24,0	1/1:16,24:28:37.66:827,38,0	1/1:5,9:12:5.85:259,6,0	0/1:8,4:11:74.71:194,0,75
chr10	21434155	.	GTGTTGTCTATATGTGCCTC	G	669.74	PASS	AB=0.951;AC=10;AF=0.179;AN=56;BaseQRankSum=4.987;DP=721;FS=21.542;HRun=0;HaplotypeScore=335.9813;InbreedingCoeff=-0.2204;MQ=38.26;MQ0=68;MQRankSum=-5.712;QD=2.30;ReadPosRankSum=-0.841;VQSLOD=1.1657;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:35:81.83:0,82,1024	0/0:3,0:3:3.48:0,3,58	0/0:31,0:5:15.04:0,15,333	0/0:39,0:6:18.06:0,18,373	0/1:20,4:17:99:257,0,203	0/1:19,0:16:50.27:50,0,521	0/1:33,0:16:45.09:45,0,255	0/0:44,0:19:49.27:0,49,466	0/0:16,0:16:5.98:0,6,294	0/0:15,0:15:18.69:0,19,315	0/0:15,0:15:24.98:0,25,255	0/1:39,0:34:7.46:7,0,962	0/0:42,0:39:5.50:0,5,691	0/0:29,0:24:51.96:0,52,572	0/1:39,0:32:47.53:48,0,666	0/0:18,0:18:40.81:0,41,417	0/0:11,0:11:8.56:0,9,198	0/0:19,0:15:32.80:0,33,523	0/0:9,0:7:19.70:0,20,156	0/1:17,0:17:69.92:70,0,191	0/1:35,0:31:0.47:0,0,714	0/1:17,15:28:99:281,0,381	0/0:29,0:21:41.76:0,42,608	0/0:30,0:27:26.35:0,26,371	0/0:21,0:17:33.58:0,34,350	0/1:40,0:33:38.10:38,0,573	0/0:15,0:13:32.87:0,33,437	0/1:12,0:11:6.30:6,0,294
chr10	21434174	.	C	CGTGTGTG	9900.35	PASS	AB=0.703;AC=28;AF=0.500;AN=56;BaseQRankSum=0.896;DP=873;FS=45.878;HRun=0;HaplotypeScore=304.0737;InbreedingCoeff=-0.7372;MQ=43.35;MQ0=44;MQRankSum=-5.822;QD=12.79;ReadPosRankSum=0.792;VQSLOD=2.5775;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:35,0:42:99:413,0,292	1/1:0,0:6:2.86:17,3,0	0/0:44,0:8:21.05:0,21,403	0/0:54,0:17:21.40:0,21,589	0/1:27,0:23:99:202,0,140	0/1:12,0:21:64.56:219,0,65	0/1:16,0:25:68.48:193,0,68	0/1:40,0:29:99:215,0,369	0/1:11,0:27:25.11:531,0,25	1/1:1,0:24:34.58:858,35,0	0/1:5,0:20:68.96:153,0,69	0/1:24,0:41:99:510,0,363	0/1:20,0:45:99:1131,0,156	0/1:13,0:28:99:471,0,103	0/1:17,1:40:52.28:478,0,52	0/1:5,0:27:23.37:553,0,23	0/1:4,0:21:15.66:358,0,16	0/1:12,0:15:62.96:158,0,63	0/1:11,0:14:74.11:202,0,74	0/1:3,0:22:59.55:245,0,60	0/1:32,0:44:99:354,0,201	0/1:28,0:26:90.80:91,0,189	0/1:17,0:28:99:223,0,195	0/1:25,0:30:32.06:32,0,230	0/1:9,0:32:51.05:377,0,51	0/1:25,0:45:99:1325,0,138	0/1:11,0:16:82.78:380,0,83	0/1:6,0:11:99:212,0,178
chr10	21435136	.	AG	A	5442.42	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=13.352;DP=553;FS=0.705;HRun=6;HaplotypeScore=62.2695;InbreedingCoeff=0.9822;MQ=77.95;MQ0=0;MQRankSum=-0.573;QD=26.55;ReadPosRankSum=1.447;VQSLOD=5.1061;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:69.19:0,69,877	1/1:0,5:5:15.04:161,15,0	0/0:14,0:14:14.86:0,15,319	0/0:17,0:17:8.01:0,8,261	0/0:10,0:10:18.06:0,18,236	0/0:20,0:20:54.18:0,54,710	0/0:20,0:20:60.15:0,60,738	0/0:22,0:22:54.15:0,54,672	0/0:15,0:15:45.10:0,45,572	1/1:5,18:23:57.13:612,57,0	1/1:1,18:19:51.13:546,51,0	0/0:24,0:24:69.21:0,69,892	0/0:25,0:25:66.21:0,66,867	0/0:22,0:22:63.19:0,63,813	1/1:2,32:34:87.22:934,87,0	1/1:1,27:28:66.17:709,66,0	1/1:2,20:22:48.12:516,48,0	0/0:10,0:10:30.08:0,30,379	1/1:2,11:13:32.90:328,33,0	1/1:2,17:19:47.13:542,47,0	1/1:3,39:42:99:1095,102,0	0/0:9,0:9:26.10:0,26,307	0/0:23,0:23:66.19:0,66,833	0/0:21,0:21:63.19:0,63,813	0/0:19,0:19:57.15:0,57,730	0/0:20,0:20:54.18:0,54,708	0/0:13,0:13:36.11:0,36,460	0/0:15,0:15:45.15:0,45,591
chr10	21435423	.	TTCC	T	1539.49	PASS	AB=0.916;AC=31;AF=0.620;AN=50;BaseQRankSum=-5.796;DP=464;FS=11.595;HRun=0;HaplotypeScore=78.0839;InbreedingCoeff=0.5645;MQ=69.75;MQ0=8;MQRankSum=-0.832;QD=5.68;ReadPosRankSum=1.948;VQSLOD=0.8472;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:29:10.16:66,10,0	0/0:6,0:6:9.03:0,9,108	./.	./.	./.	1/1:19,5:23:8.99:192,9,0	1/1:8,2:10:6.02:80,6,0	1/1:22,0:22:5.96:47,6,0	1/1:9,4:13:12.04:160,12,0	0/0:20,0:20:12.04:0,12,153	0/0:23,0:23:18.06:0,18,226	1/1:13,2:15:6.02:77,6,0	1/1:7,2:10:9:101,9,0	1/1:11,2:13:3.01:40,3,0	1/1:8,0:8:5.95:42,6,0	0/1:17,1:18:19.30:19,0,195	0/0:23,0:22:18.03:0,18,202	0/1:6,2:8:7.28:33,0,7	0/0:15,0:14:9.03:0,9,114	0/0:34,0:34:27.46:0,27,309	0/0:19,0:19:12.04:0,12,144	0/0:15,0:14:3.01:0,3,56	1/1:17,6:22:12.04:161,12,0	1/1:12,5:16:12.04:160,12,0	1/1:14,4:18:12.04:160,12,0	1/1:13,8:21:21.02:246,21,0	1/1:9,2:11:9:101,9,0	0/1:11,0:10:8.22:34,0,8
chr10	21435455	.	C	CCTT	3191.85	PASS	AB=0.757;AC=16;AF=0.286;AN=56;BaseQRankSum=-8.001;DP=407;FS=2.235;HRun=0;HaplotypeScore=70.6656;InbreedingCoeff=0.8024;MQ=69.89;MQ0=13;MQRankSum=4.441;QD=22.01;ReadPosRankSum=3.158;VQSLOD=3.4669;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:13.85:0,14,265	1/1:2,6:8:16.98:263,17,0	0/0:31,0:15:28.53:0,29,232	0/0:19,0:9:20.91:0,21,221	0/0:3,0:3:6:0,6,51	0/0:14,0:13:6.13:0,6,242	0/0:15,0:15:32.66:0,33,310	0/0:18,0:18:42.89:0,43,380	0/0:14,0:14:33.48:0,33,297	1/1:3,14:17:41.97:524,42,0	1/1:1,12:13:32.75:473,33,0	0/0:12,0:12:30.36:0,30,252	0/0:11,0:11:21.06:0,21,203	0/0:9,0:9:20.99:0,21,180	0/0:6,0:6:15.41:0,15,117	0/1:1,16:19:8:392,0,8	1/1:5,17:24:13.17:377,13,0	0/1:10,0:10:1.55:2,0,89	1/1:1,13:13:38.79:395,39,0	1/1:0,21:22:56.61:684,57,0	1/1:2,15:16:12.04:275,12,0	0/0:4,0:4:7.24:0,7,52	0/0:13,0:12:26.97:0,27,242	0/0:24,0:23:54.37:0,54,459	0/0:9,0:9:27.02:0,27,248	0/0:18,0:18:54.04:0,54,511	0/0:11,0:11:26.99:0,27,234	0/0:7,0:5:12.72:0,13,91
chr10	21437211	.	C	CG	936.66	PASS	AB=0.772;AC=23;AF=0.460;AN=50;BaseQRankSum=-0.891;DP=271;FS=9.895;HRun=11;HaplotypeScore=59.2443;InbreedingCoeff=0.1247;MQ=79.70;MQ0=0;MQRankSum=-0.981;QD=5.04;ReadPosRankSum=1.011;VQSLOD=0.6486;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:17,1:25:8.71:50,9,0	0/1:2,2:4:13.56:19,0,14	0/0:11,0:11:10.68:0,11,63	0/0:12,1:12:3.69:0,4,24	0/0:4,0:6:5.97:0,6,46	0/1:6,4:10:18.50:19,0,55	1/1:4,7:11:12.02:122,12,0	0/1:12,2:14:32.87:49,0,33	1/1:7,4:11:6:54,6,0	0/0:4,0:4:2.98:0,3,23	./.	1/1:10,1:11:11.92:88,12,0	0/0:7,0:7:2.97:0,3,23	0/1:9,6:15:8.89:25,0,9	1/1:16,0:16:40.85:233,41,0	1/1:6,3:10:6.01:61,6,0	0/1:5,4:9:11.37:63,0,11	0/1:5,10:15:15.67:184,0,16	0/1:4,0:4:7.11:25,0,7	0/0:5,1:6:2.99:0,3,23	0/0:10,0:10:2.92:0,3,22	0/0:7,0:8:4.98:0,5,29	./.	1/1:6,1:7:8.96:75,9,0	0/0:6,0:7:2.94:0,3,19	0/1:9,1:10:0:0,0,0	0/1:10,4:14:6.27:25,0,6	./.
chr10	21437216	.	G	GT	482.59	PASS	AB=1.000;AC=4;AF=0.071;AN=56;BaseQRankSum=0.125;DP=235;FS=0.000;HRun=0;HaplotypeScore=35.5280;InbreedingCoeff=0.1930;MQ=85.45;MQ0=0;MQRankSum=-1.126;QD=13.79;ReadPosRankSum=6.577;VQSLOD=3.6573;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:34.44:0,34,263	0/0:3,0:3:3.48:0,3,42	0/0:14,0:13:23.18:0,23,261	0/0:15,0:12:28.98:0,29,249	0/0:5,0:5:6.02:0,6,84	0/0:10,0:10:15.12:0,15,199	0/0:12,0:12:3.13:0,3,88	0/0:14,0:14:24.08:0,24,264	0/0:7,0:7:8.94:0,9,67	0/0:5,0:5:14.99:0,15,146	0/0:2,0:2:3:0,3,25	0/0:8,0:8:10.58:0,11,75	0/0:7,0:7:11.98:0,12,113	0/0:12,0:12:12.79:0,13,134	1/1:0,15:15:42.14:572,42,0	0/0:8,0:8:12.11:0,12,99	0/0:8,0:8:5.42:0,5,103	0/1:13,0:13:6.13:6,0,84	0/0:4,0:4:11.99:0,12,105	0/0:5,0:5:3.01:0,3,42	0/0:9,0:9:17.95:0,18,160	0/0:7,0:7:14.99:0,15,141	0/0:2,0:2:6:0,6,54	0/1:7,0:7:10.08:10,0,47	0/0:4,0:4:9.01:0,9,95	0/0:9,0:9:18:0,18,159	0/0:9,0:9:5.31:0,5,70	0/0:1,0:1:3:0,3,25
chr10	21439088	.	TCACA	T	2910.88	PASS	AB=0.787;AC=29;AF=0.518;AN=56;BaseQRankSum=-3.607;DP=631;FS=12.714;HRun=0;HaplotypeScore=128.9116;InbreedingCoeff=0.4268;MQ=63.07;MQ0=21;MQRankSum=0.177;QD=7.66;ReadPosRankSum=-0.634;VQSLOD=1.4429;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:28:24.08:0,24,478	0/0:7,0:7:5.64:0,6,27	0/0:52,0:28:0.47:0,0,1	0/0:47,0:19:0:0,0,0	0/0:15,0:20:9.03:0,9,165	1/1:16,6:24:9.01:103,9,0	1/1:13,6:20:12.03:167,12,0	0/1:19,0:19:0:0,0,0	1/1:13,8:22:18.05:261,18,0	0/0:17,0:17:3.01:0,3,54	0/0:8,0:8:0.47:0,0,1	1/1:14,7:22:14.74:214,15,0	1/1:15,10:25:20.61:454,21,0	1/1:16,8:24:9.03:140,9,0	1/1:14,0:19:9.01:84,9,0	0/0:12,0:18:16.62:0,17,101	0/1:17,1:29:13:13,0,143	0/1:17,12:30:25.21:459,0,25	0/0:16,0:16:2.74:0,3,12	0/1:17,2:22:60.09:117,0,60	0/0:13,0:14:5.99:0,6,49	0/0:20,0:20:6.02:0,6,108	1/1:17,4:21:5.69:93,6,0	0/1:21,14:34:7.84:434,0,8	1/1:10,8:18:12.04:187,12,0	1/1:15,0:16:2.96:28,3,0	1/1:15,5:20:15.05:233,15,0	1/1:11,2:13:6.02:93,6,0
chr10	21440114	.	CA	C	1057.08	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.489;DP=746;FS=0.681;HRun=3;HaplotypeScore=176.1512;InbreedingCoeff=0.9995;MQ=86.84;MQ0=0;MQRankSum=-1.245;QD=33.03;ReadPosRankSum=3.187;VQSLOD=2.8295;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,153,2172	0/0:16,0:16:42.14:0,42,601	0/0:26,0:26:75.23:0,75,1035	0/0:24,0:24:65.38:0,65,857	0/0:11,0:11:33.11:0,33,474	0/0:23,0:23:69.22:0,69,976	0/0:32,0:32:87.27:0,87,1228	0/0:22,0:22:63.21:0,63,891	0/0:25,0:25:72.23:0,72,1016	0/0:39,0:39:99:0,111,1539	0/0:18,0:18:51.16:0,51,713	0/0:30,0:30:87.28:0,87,1228	0/0:28,0:28:84.27:0,84,1191	0/0:33,0:33:90.28:0,90,1271	1/1:1,31:32:93.29:1152,93,0	0/0:29,0:28:87.25:0,87,1228	0/0:34,0:34:99:0,102,1459	0/0:25,0:25:75.25:0,75,1069	0/0:17,0:17:48.14:0,48,642	0/0:16,0:16:48.16:0,48,691	0/0:48,0:48:99:0,141,1953	0/0:20,0:20:57.18:0,57,804	0/0:16,0:16:42.10:0,42,550	0/0:42,0:42:99:0,123,1750	0/0:21,0:21:63.21:0,63,903	0/0:32,0:32:96.30:0,96,1346	0/0:20,0:20:60.20:0,60,864	0/0:13,0:13:36.12:0,36,517
chr10	21440574	.	CG	C	1471.68	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.308;DP=630;FS=6.070;HRun=1;HaplotypeScore=60.2165;InbreedingCoeff=0.9802;MQ=89.40;MQ0=0;MQRankSum=-0.433;QD=36.79;ReadPosRankSum=1.766;VQSLOD=3.9848;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,132,2085	0/0:6,0:6:18.06:0,18,287	0/0:27,0:27:81.25:0,81,1234	0/0:21,0:21:63.19:0,63,974	1/1:0,23:23:66.22:923,66,0	0/0:16,0:16:45.15:0,45,719	0/0:32,0:32:96.28:0,96,1457	0/0:30,0:29:87.27:0,87,1326	0/0:23,0:23:69.19:0,69,1066	0/0:24,0:24:72.24:0,72,1131	0/0:15,0:15:45.15:0,45,715	0/0:24,0:24:69.22:0,69,1075	0/0:15,0:15:45.15:0,45,710	0/0:23,0:23:69.18:0,69,1047	0/0:28,0:28:84.29:0,84,1341	0/0:23,0:23:66.23:0,66,1055	0/0:23,0:23:69.22:0,69,1063	0/0:20,0:20:60.20:0,60,952	0/0:27,0:27:81.24:0,81,1225	0/0:15,0:15:42.14:0,42,670	0/0:33,0:33:96.25:0,96,1454	1/1:0,17:17:48.16:670,48,0	0/0:14,0:14:36.12:0,36,574	0/0:26,0:26:78.24:0,78,1216	0/0:30,0:30:90.31:0,90,1431	0/0:26,0:26:78.27:0,78,1242	0/0:19,0:19:57.19:0,57,896	0/0:4,0:4:12.04:0,12,192
chr10	21441900	.	T	TA	9090.51	PASS	AB=0.575;AC=30;AF=0.536;AN=56;BaseQRankSum=-16.363;DP=601;FS=1.509;HRun=10;HaplotypeScore=67.9814;InbreedingCoeff=0.7506;MQ=76.43;MQ0=0;MQRankSum=-2.390;QD=23.25;ReadPosRankSum=0.205;VQSLOD=5.5071;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:47.94:0,48,394	0/0:8,0:9:23:0,23,175	0/0:15,0:16:25.95:0,26,197	0/0:12,0:12:21.38:0,21,150	1/1:5,30:35:87.86:865,88,0	0/1:4,14:18:20.37:397,0,20	1/1:1,14:15:39.10:416,39,0	1/1:10,18:29:35.29:540,35,0	1/1:3,14:18:38.93:398,39,0	0/0:26,0:26:68.91:0,69,565	0/0:19,0:19:44.93:0,45,369	1/1:3,17:20:39.10:416,39,0	1/1:3,13:16:36.09:383,36,0	1/1:1,17:20:51.11:531,51,0	1/1:4,27:31:75.19:800,75,0	0/0:19,0:19:44.92:0,45,367	0/0:28,0:28:83.88:0,84,686	0/1:7,18:25:38.25:451,0,38	0/0:22,0:22:50.91:0,51,415	0/0:32,0:32:74.59:0,75,615	0/0:8,0:8:20.94:0,21,167	1/1:7,24:31:72.13:749,72,0	1/1:2,28:30:74.85:799,75,0	0/1:3,9:12:0.58:200,0,1	0/1:5,12:17:10.19:313,0,10	1/1:3,26:29:53.23:771,53,0	1/1:7,28:35:53.55:775,54,0	1/1:0,10:10:27.07:287,27,0
chr10	21442260	.	TACACACAA	T	3510.52	PASS	AB=1.000;AC=31;AF=0.574;AN=54;BaseQRankSum=0.984;DP=621;FS=0.937;HRun=0;HaplotypeScore=150.6960;InbreedingCoeff=0.5921;MQ=70.26;MQ0=8;MQRankSum=-1.505;QD=10.29;ReadPosRankSum=1.486;VQSLOD=2.6772;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:80.24:0,80,2437	0/0:8,0:8:12.95:0,13,130	0/0:44,0:28:61.85:0,62,559	0/0:46,0:28:54.40:0,54,535	0/0:19,0:19:37.98:0,38,283	1/1:17,0:17:16.74:253,17,0	1/1:6,19:25:6.02:106,6,0	1/1:34,0:33:76.40:630,76,0	1/1:20,2:22:24.81:410,25,0	0/1:19,0:19:18.59:19,0,481	0/1:13,0:13:25.90:26,0,274	1/1:14,0:13:20.95:169,21,0	1/1:6,15:21:3.48:82,3,0	1/1:2,17:19:12.04:314,12,0	0/0:20,0:20:39.09:0,39,1035	0/1:18,0:18:19.11:19,0,226	0/1:23,0:23:7.67:8,0,194	1/1:19,0:19:37.82:362,38,0	0/0:14,0:14:31.76:0,32,358	0/0:24,0:24:61.98:0,62,682	0/0:47,0:46:99:0,104,1038	0/1:28,0:27:2.16:2,0,443	1/1:14,0:15:31.98:258,32,0	./.	1/1:13,1:14:26.97:225,27,0	1/1:21,0:21:30.82:406,31,0	1/1:1,10:11:2.85:81,3,0	1/1:8,0:8:17.94:141,18,0
chr10	21442266	.	CAA	C	2771.96	PASS	AB=0.982;AC=29;AF=0.518;AN=56;BaseQRankSum=-0.378;DP=599;FS=5.509;HRun=3;HaplotypeScore=97.7863;InbreedingCoeff=0.7685;MQ=66.31;MQ0=11;MQRankSum=0.080;QD=10.50;ReadPosRankSum=0.730;VQSLOD=0.4399;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:38:48.81:0,49,910	0/0:8,0:8:17.04:0,17,140	0/0:40,0:24:61.85:0,62,559	0/0:43,0:25:54.22:0,54,534	0/0:17,0:17:38.54:0,39,303	1/1:16,0:15:35.93:291,36,0	1/1:19,1:20:5.83:32,6,0	1/1:18,10:27:77.75:642,78,0	1/1:20,0:20:43.67:333,44,0	0/0:18,0:18:44.95:0,45,407	0/1:14,0:14:11.64:12,0,213	1/1:13,0:12:20.95:169,21,0	1/1:17,0:17:3.45:21,3,0	1/1:18,0:18:11.53:74,12,0	0/0:23,0:23:25.83:0,26,458	0/1:19,0:19:20.92:21,0,202	0/0:24,0:24:27.59:0,28,216	1/1:17,0:17:41.34:315,41,0	0/0:22,0:21:48.51:0,49,399	0/0:24,0:24:36.35:0,36,391	0/0:50,1:50:31.05:0,31,731	0/0:26,0:25:52.46:0,52,425	1/1:11,0:11:31.90:239,32,0	0/1:17,1:18:0:0,0,0	1/1:13,0:13:26.97:225,27,0	1/1:22,0:22:31.34:448,31,0	1/1:10,0:10:2.82:21,3,0	1/1:8,0:8:17.94:140,18,0
chr10	21442268	.	AACACAC	A	1745.76	PASS	AB=0.925;AC=25;AF=0.500;AN=50;BaseQRankSum=3.172;DP=630;FS=0.707;HRun=0;HaplotypeScore=144.5630;InbreedingCoeff=0.0735;MQ=64.59;MQ0=12;MQRankSum=-2.515;QD=4.71;ReadPosRankSum=1.345;VQSLOD=2.0585;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:42:77.83:0,78,1744	1/1:5,2:7:3.01:61,3,0	./.	./.	0/0:14,0:19:1.59:0,2,8	0/1:16,0:15:0.63:1,0,15	0/1:20,0:20:5.91:26,0,6	./.	1/1:21,0:21:5.98:74,6,0	0/1:14,2:18:37.67:149,0,38	0/1:13,0:15:8:143,0,8	0/0:13,0:12:3:0,3,25	0/1:16,0:16:18.47:33,0,18	1/1:19,0:19:12.03:136,12,0	0/0:14,0:25:32.62:0,33,836	1/1:12,8:20:9.12:320,9,0	0/1:17,10:27:0.58:298,0,1	0/1:19,0:19:23.47:23,0,47	1/1:19,3:21:8.98:147,9,0	0/1:17,0:26:9:9,0,83	0/1:54,0:53:54.49:295,0,54	1/1:21,7:27:3.67:133,4,0	0/1:12,0:12:6.89:7,0,18	0/1:19,0:19:0:0,0,0	0/0:16,0:16:2.59:0,3,19	0/0:25,0:25:11.85:0,12,83	1/1:11,0:11:3.01:37,3,0	0/0:10,0:10:4.31:0,4,24
chr10	21442552	.	C	CT	21592.61	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=5.622;DP=695;FS=8.746;HRun=3;HaplotypeScore=115.2450;InbreedingCoeff=0.9994;MQ=92.22;MQ0=0;MQRankSum=-7.870;QD=38.49;ReadPosRankSum=2.622;VQSLOD=3.6232;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:81.23:0,81,958	1/1:1,10:11:24.08:334,24,0	0/0:29,0:29:81.18:0,81,931	0/0:28,0:28:75.22:0,75,888	0/0:17,0:17:48.15:0,48,576	1/1:1,24:25:66.22:924,66,0	1/1:1,31:32:87.29:1218,87,0	1/1:2,35:37:99:1383,105,0	1/1:1,29:30:87.25:1196,87,0	1/1:0,23:23:69.21:947,69,0	1/1:1,17:18:45.11:608,45,0	1/1:3,17:20:51.17:714,51,0	1/1:2,27:29:72.24:1008,72,0	1/1:0,24:24:66.22:924,66,0	1/1:3,23:26:63.21:882,63,0	1/1:3,39:42:99:1670,120,0	1/1:0,28:28:78.26:1092,78,0	1/1:1,22:23:63.21:882,63,0	1/1:3,27:30:87.25:1193,87,0	1/1:0,12:12:36.12:503,36,0	1/1:0,22:22:63.21:882,63,0	0/0:28,0:28:84.26:0,84,1008	1/1:1,25:26:72.24:1008,72,0	1/1:0,27:27:81.27:1134,81,0	1/1:1,21:22:63.21:882,63,0	1/1:1,26:27:81.27:1131,81,0	1/1:1,16:17:48.15:656,48,0	1/1:0,10:10:30.10:420,30,0
chr10	21443153	.	CT	C	4664.08	PASS	AB=0.941;AC=51;AF=0.911;AN=56;BaseQRankSum=3.867;DP=617;FS=10.707;HRun=14;HaplotypeScore=83.9156;InbreedingCoeff=0.7077;MQ=76.03;MQ0=0;MQRankSum=-1.831;QD=8.24;ReadPosRankSum=1.934;VQSLOD=3.1929;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,0:25:24.41:72,24,0	1/1:2,0:11:18.51:54,19,0	0/0:23,1:20:19.91:0,20,169	0/1:15,1:13:19.26:23,0,19	1/1:7,0:34:45.34:131,45,0	1/1:2,19:22:40.68:273,41,0	1/1:2,20:22:28.71:342,29,0	1/1:11,24:37:66.23:441,66,0	1/1:0,22:24:61.08:405,61,0	1/1:7,0:39:62.27:183,62,0	1/1:6,0:24:33.14:99,33,0	1/1:8,7:16:7.88:47,8,0	1/1:7,11:18:5.98:161,6,0	1/1:7,16:23:35.61:247,36,0	0/0:27,0:27:37.94:0,38,468	1/1:1,0:23:34.15:99,34,0	1/1:2,0:16:28.50:82,28,0	1/1:3,8:15:29.87:182,30,0	1/1:9,0:20:20.38:58,20,0	1/1:7,3:25:33.42:136,33,0	1/1:1,0:11:19.02:59,19,0	1/1:3,0:20:30.53:89,31,0	1/1:4,11:15:26.71:183,27,0	1/1:6,21:29:38.65:395,39,0	1/1:3,13:19:30.79:197,31,0	1/1:4,13:17:13.77:220,14,0	1/1:9,25:34:50.40:350,50,0	1/1:1,8:11:21.93:135,22,0
chr10	21443749	.	T	TGGG	2849.39	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=10.334;DP=536;FS=7.425;HRun=0;HaplotypeScore=86.8852;InbreedingCoeff=0.9029;MQ=78.97;MQ0=2;MQRankSum=-3.430;QD=20.50;ReadPosRankSum=-2.552;VQSLOD=2.4195;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,105,1921	1/1:5,0:5:7.14:94,7,0	0/0:15,0:15:42.13:0,42,697	0/0:22,0:21:48.11:0,48,758	1/1:8,4:12:1.63:192,2,0	0/0:24,0:24:72.24:0,72,1313	0/0:26,0:26:78.22:0,78,1319	0/0:22,0:22:63.21:0,63,1123	0/0:14,0:14:42.12:0,42,715	1/1:10,4:14:23.13:321,23,0	1/1:13,3:16:8.44:300,8,0	0/0:20,0:20:57.18:0,57,1026	0/0:27,0:27:81.27:0,81,1444	0/0:22,0:22:66.20:0,66,1138	0/0:21,0:20:60.20:0,60,1089	1/1:2,10:21:27.09:483,27,0	1/1:5,13:20:28:550,28,0	0/0:23,0:23:66.21:0,66,1179	1/1:1,10:15:33.58:520,34,0	1/1:3,1:5:5.41:80,5,0	1/1:3,10:17:18.06:344,18,0	1/1:1,6:13:10.21:171,10,0	0/0:20,0:20:57.17:0,57,990	0/0:19,0:18:48.15:0,48,858	0/0:27,0:27:81.25:0,81,1434	0/0:23,1:24:10.39:0,10,1124	0/0:32,0:32:96.33:0,96,1764	0/0:4,0:4:9.02:0,9,137
chr10	21444323	.	T	TAG	950.24	PASS	AB=0.832;AC=12;AF=0.222;AN=54;BaseQRankSum=5.300;DP=551;FS=4.046;HRun=0;HaplotypeScore=117.6292;InbreedingCoeff=0.5919;MQ=75.72;MQ0=2;MQRankSum=-1.786;QD=6.17;ReadPosRankSum=0.088;VQSLOD=3.3025;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:33:52.80:0,53,456	0/1:4,1:5:6.08:28,0,6	0/0:23,0:12:13.26:0,13,382	0/1:23,0:18:19.26:19,0,152	0/0:5,0:13:22.94:0,23,124	0/0:21,0:21:51.15:0,51,726	0/0:22,0:22:66.20:0,66,956	0/0:34,0:33:68.36:0,68,971	0/0:12,0:13:9.11:0,9,410	0/1:19,3:22:2.05:188,0,2	0/1:8,0:18:4.99:81,0,5	0/0:18,0:19:48.11:0,48,641	0/0:15,0:17:36.03:0,36,434	0/0:14,0:15:45.13:0,45,629	0/0:24,0:23:50.99:0,51,719	1/1:20,2:26:15.52:214,16,0	1/1:13,6:21:15.96:229,16,0	0/0:31,0:31:87.28:0,87,1264	1/1:6,2:10:13.78:131,14,0	1/1:11,14:28:1.58:222,2,0	./.	0/0:4,0:17:34.70:0,35,136	0/0:17,0:17:42.13:0,42,605	0/0:29,0:30:87.24:0,87,1213	0/0:15,0:15:45.11:0,45,630	0/0:27,0:27:69.07:0,69,1006	0/0:20,0:20:48.16:0,48,693	0/0:3,0:3:9.03:0,9,136
chr10	21444324	.	A	AG	468.36	PASS	AB=0.917;AC=11;AF=0.204;AN=54;BaseQRankSum=5.318;DP=556;FS=13.624;HRun=0;HaplotypeScore=114.7171;InbreedingCoeff=0.4531;MQ=74.07;MQ0=3;MQRankSum=-1.442;QD=3.00;ReadPosRankSum=0.136;VQSLOD=2.2658;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:35:82.92:0,83,830	0/0:4,0:5:1.27:0,1,21	0/0:23,0:11:25.56:0,26,386	0/1:21,1:17:36.75:37,0,149	0/1:12,0:13:4.03:4,0,49	0/0:24,0:24:51.17:0,51,676	0/0:22,0:22:66.22:0,66,887	0/0:32,0:31:68.77:0,69,885	0/0:15,0:15:9.09:0,9,363	0/1:20,3:22:2.88:111,0,3	1/1:14,1:15:12.05:81,12,0	0/0:19,0:19:48.03:0,48,592	0/0:17,0:17:35.85:0,36,387	0/0:17,0:17:45.12:0,45,587	0/0:28,0:27:56.84:0,57,732	0/1:16,9:26:3.81:119,0,4	0/1:20,0:21:7.56:49,0,8	0/0:31,0:31:87.29:0,87,1163	1/1:6,3:9:8.18:60,8,0	1/1:21,5:26:4.93:157,5,0	./.	0/0:17,0:18:24.32:0,24,72	0/0:17,0:17:41.72:0,42,534	0/0:30,0:30:87.24:0,87,1113	0/0:15,0:15:45.11:0,45,574	0/0:26,0:26:69.09:0,69,923	0/0:20,0:21:51.16:0,51,662	0/0:3,0:3:9.03:0,9,123
chr10	21444325	.	CAA	C	4492.34	PASS	AB=0.576;AC=31;AF=0.574;AN=54;BaseQRankSum=-9.399;DP=574;FS=6.958;HRun=15;HaplotypeScore=98.5703;InbreedingCoeff=0.8472;MQ=71.67;MQ0=3;MQRankSum=0.105;QD=14.13;ReadPosRankSum=6.232;VQSLOD=3.8209;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:39:78.05:0,78,740	0/0:5,0:5:14.49:0,14,132	0/0:22,0:10:1.55:0,2,4	0/0:22,0:16:22.35:0,22,189	1/1:13,1:14:15.95:164,16,0	1/1:4,19:24:23.52:300,24,0	1/1:10,10:22:24.22:272,24,0	1/1:5,22:31:39.85:399,40,0	1/1:3,11:14:26.95:238,27,0	0/0:24,0:23:41.07:0,41,363	0/0:19,0:19:28.20:0,28,238	0/1:5,11:19:2.70:211,0,3	1/1:4,11:16:26.62:222,27,0	1/1:8,9:17:26.91:238,27,0	0/0:28,0:30:74.63:0,75,844	0/0:26,0:26:52.61:0,53,503	0/0:23,0:23:33.79:0,34,329	1/1:9,21:31:56.66:536,57,0	0/0:11,0:11:23.93:0,24,204	0/0:28,0:28:49.79:0,50,447	./.	1/1:18,0:18:23.61:254,24,0	1/1:3,13:18:11.46:225,11,0	1/1:10,18:29:47.78:467,48,0	1/1:1,12:13:35.97:317,36,0	1/1:8,17:26:7.67:350,8,0	1/1:7,14:22:4.31:255,4,0	1/1:1,2:3:0.72:45,1,0
chr10	21445145	.	TAACAAC	T	707.36	PASS	AB=0.857;AC=15;AF=0.278;AN=54;BaseQRankSum=4.890;DP=247;FS=0.000;HRun=0;HaplotypeScore=53.9606;InbreedingCoeff=0.7101;MQ=70.47;MQ0=1;MQRankSum=-4.713;QD=13.35;ReadPosRankSum=-2.301;VQSLOD=1.3760;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:36.12:0,36,1055	./.	0/0:14,0:12:15.04:0,15,375	0/0:20,0:17:36.08:0,36,855	0/0:8,0:8:17.77:0,18,607	0/0:5,0:5:15.05:0,15,506	0/0:5,0:5:9.03:0,9,304	0/0:26,0:26:42.13:0,42,1228	0/0:7,0:7:18.05:0,18,492	1/1:3,3:6:9.03:189,9,0	1/1:4,3:7:5.93:40,6,0	0/0:6,0:6:15.05:0,15,506	0/0:6,0:6:18.06:0,18,550	0/0:6,0:6:9.03:0,9,304	0/0:10,0:10:21.07:0,21,665	1/1:3,1:4:3.01:59,3,0	1/1:1,6:7:12.04:242,12,0	0/0:14,0:14:33.11:0,33,1105	1/1:6,0:6:6.01:59,6,0	1/1:5,4:9:12.01:180,12,0	1/1:6,2:8:3.01:59,3,0	0/0:6,0:6:12.04:0,12,276	0/0:8,0:8:9.03:0,9,304	0/0:5,0:5:6.02:0,6,164	0/0:13,0:13:30.10:0,30,895	0/1:5,1:6:48.42:48,0,390	0/0:12,0:12:33.11:0,33,1080	0/0:5,0:5:15.05:0,15,506
chr10	21445168	.	T	TTA	196.96	PASS	AB=0.833;AC=7;AF=0.184;AN=38;BaseQRankSum=3.664;DP=168;FS=13.145;HRun=0;HaplotypeScore=32.6542;InbreedingCoeff=0.4037;MQ=61.70;MQ0=4;MQRankSum=-4.265;QD=10.94;ReadPosRankSum=-0.309;VQSLOD=0.9656;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:18:0,18,193	./.	0/0:11,0:5:2.98:0,3,21	0/0:20,0:7:11.58:0,12,100	0/0:6,0:6:11.71:0,12,122	0/0:5,0:5:6.02:0,6,74	./.	0/0:22,0:22:33.09:0,33,398	0/0:3,0:3:6.02:0,6,74	1/1:4,1:5:3.01:39,3,0	./.	0/0:5,0:5:6.02:0,6,74	0/0:4,0:4:3.01:0,3,37	0/0:1,0:1:3.01:0,3,37	0/0:6,0:6:12.04:0,12,148	./.	1/1:3,3:6:9.03:141,9,0	0/0:12,0:12:21.07:0,21,257	1/1:0,2:2:6.02:98,6,0	./.	./.	./.	./.	./.	0/0:14,0:14:36.02:0,36,402	0/1:4,1:5:32.39:32,0,133	0/0:10,0:10:0.06:0,0,134	0/0:5,0:5:12.04:0,12,149
chr10	21445196	.	TTA	T	1197.30	PASS	AB=1.000;AC=15;AF=0.536;AN=28;BaseQRankSum=-3.714;DP=133;FS=13.119;HRun=0;HaplotypeScore=43.6822;InbreedingCoeff=0.4900;MQ=83.09;MQ0=8;MQRankSum=1.079;QD=12.74;ReadPosRankSum=-0.488;VQSLOD=1.5540;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,4:5:9.03:113,9,0	./.	0/0:21,0:9:8.01:0,8,88	0/1:42,0:12:12.99:13,0,69	0/0:4,0:4:3.01:0,3,50	1/1:1,1:2:3.01:38,3,0	./.	1/1:4,19:23:57.15:686,57,0	./.	0/0:0,0:2:5.04:0,5,32	./.	./.	./.	./.	0/0:1,0:1:3.01:0,3,50	./.	0/0:4,0:5:0.47:0,0,2	1/1:2,5:7:12.04:150,12,0	0/0:1,0:2:5.74:0,6,38	./.	./.	./.	./.	./.	1/1:2,5:8:14.88:165,15,0	./.	1/1:1,2:3:6.02:75,6,0	1/1:2,2:4:6.01:75,6,0
chr10	21445232	.	G	GTATATA	740.16	PASS	AB=0.923;AC=13;AF=0.650;AN=20;BaseQRankSum=0.276;DP=97;FS=13.468;HRun=0;HaplotypeScore=53.7131;InbreedingCoeff=-0.0759;MQ=94.59;MQ0=4;MQRankSum=-1.990;QD=7.87;ReadPosRankSum=1.868;VQSLOD=0.0632;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:0,0:1:0:0,0,0	./.	0/1:16,0:4:2.58:3,0,26	0/1:39,0:15:2.21:30,0,2	./.	./.	./.	0/1:18,2:19:99:231,0,157	./.	1/1:2,0:2:6.02:87,6,0	./.	./.	./.	./.	1/1:1,0:1:3:25,3,0	./.	0/1:2,0:2:0:0,0,0	0/1:4,1:5:99:139,0,118	./.	./.	./.	./.	./.	./.	1/1:2,2:4:6.02:166,6,0	./.	./.	1/1:2,0:2:6.02:144,6,0
chr10	21445279	.	AT	A	49.48	PASS	AC=8;AF=0.571;AN=14;BaseQRankSum=1.600;DP=28;FS=5.756;HRun=1;HaplotypeScore=32.6481;MQ=56.55;MQ0=1;MQRankSum=-0.667;QD=7.07;ReadPosRankSum=0.267;VQSLOD=0.6084;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	0/0:9,0:3:4.99:0,5,26	./.	./.	./.	0/0:4,0:4:11.99:0,12,109	./.	./.	./.	./.	./.	./.	./.	1/1:0,2:2:3.01:35,3,0	1/1:1,1:2:5.88:50,6,0	0/0:4,0:3:9.03:0,9,112	1/1:0,1:1:3.01:35,3,0	./.	./.	./.	./.	./.	./.	./.	./.	1/1:2,0:2:2.90:16,3,0
chr10	21445290	.	TA	T	284.52	PASS	AC=10;AF=0.500;AN=20;BaseQRankSum=2.036;DP=30;FS=10.942;HRun=1;HaplotypeScore=23.0340;InbreedingCoeff=0.5585;MQ=64.01;MQ0=0;MQRankSum=-1.248;QD=21.89;ReadPosRankSum=0.591;VQSLOD=2.1038;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	0/0:4,0:2:3.01:0,3,38	./.	./.	./.	0/0:5,0:5:9.13:0,9,84	./.	./.	./.	./.	./.	./.	0/0:1,0:1:3.01:0,3,38	1/1:0,4:4:9.03:120,9,0	1/1:0,2:2:6.02:75,6,0	0/0:5,0:4:12.04:0,12,152	1/1:2,3:5:12.03:146,12,0	1/1:1,0:1:3.01:40,3,0	./.	./.	./.	./.	./.	./.	0/0:1,0:1:3.01:0,3,38	1/1:1,0:1:1.25:3,1,0
chr10	21446140	.	TA	T	4641.03	PASS	AB=0.871;AC=21;AF=0.375;AN=56;BaseQRankSum=13.123;DP=593;FS=6.384;HRun=10;HaplotypeScore=59.8609;InbreedingCoeff=0.9237;MQ=79.08;MQ0=0;MQRankSum=0.604;QD=20.18;ReadPosRankSum=2.579;VQSLOD=5.8987;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:75.16:0,75,816	1/1:0,14:14:41.99:365,42,0	0/0:17,0:19:29.48:0,29,272	0/0:14,0:13:33.01:0,33,333	1/1:4,27:31:47.79:644,48,0	0/0:9,0:9:24.06:0,24,265	0/0:17,0:17:45.09:0,45,480	0/0:38,0:38:99:0,99,1087	0/0:15,0:15:39.11:0,39,431	1/1:2,21:23:62.96:541,63,0	1/1:3,17:21:47.01:397,47,0	0/0:15,0:15:39.11:0,39,431	0/0:14,1:15:13.04:0,13,363	0/0:23,0:23:54.15:0,54,597	0/0:25,0:25:60.12:0,60,642	1/1:3,29:32:80.98:703,81,0	1/1:0,16:16:44.99:391,45,0	0/0:35,0:35:93.23:0,93,1019	1/1:0,8:8:24:208,24,0	1/1:2,20:22:59.98:520,60,0	1/1:1,13:14:38.99:339,39,0	1/1:1,21:22:59.98:521,60,0	0/0:25,1:26:34.07:0,34,592	0/0:17,1:18:25.07:0,25,496	0/0:24,0:24:51.12:0,51,555	0/0:24,1:26:36.94:0,37,614	0/1:23,4:27:11.99:12,0,564	0/0:15,0:15:45.12:0,45,498
chr10	21449438	.	A	AAAGG	4086.87	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-7.196;DP=839;FS=2.381;HRun=0;HaplotypeScore=134.6374;InbreedingCoeff=0.9953;MQ=88.71;MQ0=0;MQRankSum=-2.631;QD=57.56;ReadPosRankSum=0.176;VQSLOD=4.9839;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,129,2188	0/0:11,0:11:30.07:0,30,476	0/0:38,0:38:90.12:0,90,1461	0/0:25,0:25:51.14:0,51,815	1/1:5,24:32:75.21:1714,75,0	0/0:32,0:32:90.29:0,90,1549	0/0:28,0:27:75.26:0,75,1301	0/0:23,0:23:51.17:0,51,868	0/0:27,0:27:75.26:0,75,1315	0/0:33,0:33:96.30:0,96,1627	0/0:17,0:17:42.14:0,42,736	0/0:26,0:26:75.26:0,75,1307	0/0:35,0:35:96.33:0,96,1664	0/0:37,0:37:99:0,102,1729	0/0:34,0:34:90.30:0,90,1552	0/0:31,0:31:78.25:0,78,1333	0/0:34,0:34:99:0,102,1715	0/0:24,0:24:54.18:0,54,940	0/0:10,0:10:18.06:0,18,307	0/0:33,0:33:90.29:0,90,1537	0/0:45,0:45:99:0,123,2149	1/1:4,34:39:93.32:2373,93,0	0/0:41,0:41:99:0,102,1783	0/0:26,0:26:72.25:0,72,1262	0/0:28,0:28:78.27:0,78,1367	0/0:37,0:37:90.31:0,90,1577	0/0:33,0:33:96.32:0,96,1647	0/0:13,0:13:30.10:0,30,526
chr10	21450494	.	GTCTTC	G	10257.98	PASS	AB=0.938;AC=21;AF=0.375;AN=56;BaseQRankSum=16.321;DP=801;FS=1.792;HRun=0;HaplotypeScore=160.3748;InbreedingCoeff=0.9237;MQ=96.64;MQ0=0;MQRankSum=-6.646;QD=39.91;ReadPosRankSum=3.417;VQSLOD=5.1784;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,108,3213	1/1:0,15:15:36.12:725,36,0	0/0:38,0:38:73.80:0,74,2531	0/0:49,0:49:99:0,108,3262	1/1:5,23:28:54.19:1084,54,0	0/0:40,0:40:99:0,114,3414	0/0:34,0:34:96.33:0,96,2868	0/0:29,0:28:75.26:0,75,2237	0/0:20,0:20:57.13:0,57,1646	1/1:4,24:28:75.24:1474,75,0	1/1:2,13:15:30.10:604,30,0	0/0:40,0:40:99:0,111,3296	0/0:40,0:40:99:0,114,3300	0/0:36,0:36:90.23:0,90,2521	0/0:35,0:35:96.33:0,96,2843	1/1:4,28:32:78.27:1570,78,0	1/1:1,16:17:45.15:906,45,0	0/0:23,0:23:63.22:0,63,1854	1/1:5,13:18:36.10:656,36,0	1/1:5,19:24:51.17:1026,51,0	1/1:2,23:25:48.16:966,48,0	1/1:1,23:25:60.21:1208,60,0	0/0:28,0:28:78.15:0,78,2203	0/0:30,0:30:84.29:0,84,2482	0/0:22,0:22:63.22:0,63,1899	0/1:28,2:30:39.55:40,0,2116	0/0:31,0:29:84.29:0,84,2484	0/0:11,0:11:33.11:0,33,993
chr10	21451980	.	ATG	A	3854.37	PASS	AB=0.729;AC=28;AF=0.500;AN=56;BaseQRankSum=2.561;DP=567;FS=0.529;HRun=0;HaplotypeScore=156.5066;InbreedingCoeff=0.8490;MQ=50.80;MQ0=24;MQRankSum=-3.937;QD=16.47;ReadPosRankSum=0.314;VQSLOD=3.2281;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:69.24:0,69,1133	0/0:7,0:7:18.06:0,18,299	0/0:46,0:12:15.02:0,15,220	0/0:56,0:18:30.09:0,30,453	0/0:18,0:17:33.10:0,33,412	1/1:4,10:14:11.92:151,12,0	1/1:2,11:13:14.38:188,14,0	1/1:6,19:25:51.71:653,52,0	0/1:2,16:18:31.34:170,0,31	0/0:18,0:18:51.17:0,51,808	0/0:13,1:14:15.05:0,15,249	1/1:3,14:17:21.07:264,21,0	1/1:4,13:17:27.08:332,27,0	1/1:2,19:21:20.82:264,21,0	0/1:12,1:13:1.74:2,0,512	0/0:15,1:16:36.10:0,36,567	0/0:27,0:27:51.17:0,51,842	1/1:4,8:11:24.08:303,24,0	0/0:15,0:14:18.06:0,18,299	0/0:15,0:15:36.12:0,36,594	0/0:48,1:49:52.44:0,52,1393	0/0:16,0:16:36.11:0,36,457	1/1:1,11:12:9.02:114,9,0	1/1:8,9:16:11.81:151,12,0	1/1:2,13:15:9.03:114,9,0	1/1:2,14:16:45.13:555,45,0	1/1:0,12:12:17.56:220,18,0	1/1:0,11:11:30.10:376,30,0
chr10	21452003	.	C	CGT	9765.46	PASS	AB=0.573;AC=45;AF=0.833;AN=54;BaseQRankSum=0.653;DP=596;FS=2.929;HRun=0;HaplotypeScore=177.8516;InbreedingCoeff=0.5288;MQ=43.57;MQ0=20;MQRankSum=-2.690;QD=21.37;ReadPosRankSum=-0.330;VQSLOD=5.2539;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:29.98:0,30,372	1/1:3,5:8:9.03:150,9,0	0/0:36,0:6:3:0,3,38	./.	1/1:5,14:19:30.38:494,30,0	1/1:3,11:14:9:144,9,0	1/1:5,11:16:11.88:193,12,0	1/1:13,28:40:52.64:1285,53,0	1/1:3,19:22:17.77:265,18,0	1/1:3,18:21:50.61:854,51,0	1/1:3,13:17:12.04:200,12,0	1/1:5,19:24:24.05:370,24,0	1/1:4,9:13:15.05:241,15,0	0/1:4,15:19:26.22:133,0,26	0/0:15,0:15:45.14:0,45,572	0/1:4,11:15:14.10:327,0,14	1/1:4,18:22:43.31:706,43,0	1/1:3,10:13:27.09:449,27,0	1/1:4,10:12:30.06:452,30,0	1/1:1,18:19:33.11:551,33,0	1/1:10,29:36:30.34:829,30,0	1/1:1,13:15:30.10:498,30,0	1/1:7,10:17:2.59:50,3,0	0/1:4,9:14:0.23:0,0,0	1/1:5,18:23:3.01:50,3,0	1/1:5,17:22:54.13:831,54,0	1/1:1,11:12:15.05:242,15,0	1/1:8,9:16:27.09:449,27,0
chr10	21452062	.	TTTTC	T	6490.86	PASS	AB=1.000;AC=49;AF=0.875;AN=56;BaseQRankSum=1.830;DP=316;FS=5.011;HRun=0;HaplotypeScore=131.7060;InbreedingCoeff=0.6694;MQ=60.25;MQ0=2;MQRankSum=-4.027;QD=22.70;ReadPosRankSum=1.144;VQSLOD=4.5626;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:16:8.97:70,9,0	1/1:5,1:6:18.06:244,18,0	0/0:13,0:7:11.32:0,11,154	0/0:6,0:4:8.51:0,9,86	1/1:9,3:12:20.94:272,21,0	1/1:5,4:9:18.02:285,18,0	1/1:4,1:5:15.01:179,15,0	1/1:21,0:21:57.19:800,57,0	1/1:12,0:12:18.05:226,18,0	1/1:13,2:15:33:381,33,0	1/1:10,0:10:18.01:238,18,0	1/1:12,1:13:26.11:314,26,0	1/1:4,3:7:9.03:138,9,0	1/1:12,2:14:24.01:307,24,0	0/0:11,0:11:28.90:0,29,445	1/1:6,0:6:11.79:139,12,0	1/1:13,8:21:45.12:700,45,0	1/1:14,0:14:21.06:267,21,0	1/1:13,2:14:30.06:427,30,0	1/1:16,1:17:33.10:449,33,0	1/1:4,1:5:5.98:53,6,0	1/1:2,0:2:2.96:32,3,0	1/1:6,0:6:9.02:97,9,0	1/1:6,0:6:1.29:12,1,0	1/1:23,0:23:27.29:322,27,0	1/1:8,0:8:18.06:263,18,0	1/1:10,0:10:11.99:134,12,0	0/1:13,0:13:0.34:141,0,0
chr10	21452066	.	CTTTCTTTTATTT	C	8598	PASS	AB=0.981;AC=39;AF=0.696;AN=56;BaseQRankSum=-1.344;DP=290;FS=14.914;HRun=0;HaplotypeScore=134.3864;InbreedingCoeff=0.0014;MQ=61.48;MQ0=4;MQRankSum=-4.996;QD=32.82;ReadPosRankSum=-1.058;VQSLOD=3.4995;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:17,0:17:14.94:21,0,15	0/1:6,0:6:59.72:197,0,60	0/0:12,0:7:10.79:0,11,272	0/0:6,0:4:8.70:0,9,134	0/1:11,0:11:18.64:81,0,19	0/1:8,0:8:83.33:83,0,229	1/1:4,0:5:15.05:288,15,0	1/1:22,0:22:66.13:1304,66,0	1/1:9,1:10:26.97:511,27,0	1/1:11,0:15:44.93:614,45,0	0/1:7,0:7:29.23:228,0,29	0/1:12,0:13:23.85:372,0,24	0/1:5,0:6:42.07:42,0,79	0/1:11,0:11:99:249,0,209	0/0:10,0:10:30.10:0,30,764	1/1:4,0:5:11.87:211,12,0	0/1:19,0:19:99:207,0,477	1/1:3,0:15:21.07:516,21,0	0/1:12,0:12:99:385,0,141	0/1:12,0:13:52.49:511,0,52	1/1:4,0:4:12.01:142,12,0	1/1:1,0:1:2.74:12,3,0	1/1:5,0:5:11.96:167,12,0	1/1:4,0:4:2.15:22,2,0	1/1:11,12:23:56.89:1125,57,0	1/1:7,0:7:21.06:417,21,0	1/1:1,5:7:12.04:350,12,0	1/1:3,10:13:21.03:545,21,0
chr10	21452070	.	CTTTTATTT	C	3431.51	PASS	AB=1.000;AC=41;AF=0.732;AN=56;BaseQRankSum=3.400;DP=263;FS=17.036;HRun=0;HaplotypeScore=121.3942;InbreedingCoeff=0.1013;MQ=63.29;MQ0=4;MQRankSum=-6.060;QD=14.48;ReadPosRankSum=-1.002;VQSLOD=1.5174;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:0,17:17:9.03:264,9,0	0/1:6,0:6:54.83:55,0,58	0/0:10,0:7:15.90:0,16,96	0/0:6,0:4:8.87:0,9,59	1/1:9,0:9:20.50:171,21,0	0/1:8,0:8:13.89:14,0,218	1/1:5,0:5:11.77:78,12,0	1/1:23,0:21:62.21:425,62,0	1/1:8,0:8:20.75:183,21,0	1/1:11,0:11:27.89:316,28,0	0/1:7,0:7:27.15:84,0,27	0/1:12,0:12:17.78:123,0,18	0/1:4,0:4:46.44:46,0,71	0/1:7,0:7:38.41:38,0,176	0/0:10,0:10:29.39:0,29,265	1/1:5,0:5:11.30:70,11,0	0/1:21,0:21:53.68:54,0,575	1/1:15,0:15:20.85:213,21,0	0/1:11,0:10:96.94:97,0,129	0/1:13,0:13:99:136,0,140	1/1:2,0:2:2.90:17,3,0	1/1:1,0:1:2.88:15,3,0	1/1:4,0:4:8.73:49,9,0	1/1:4,0:4:0.65:3,1,0	1/1:19,0:19:44.54:443,45,0	1/1:6,0:6:17.85:129,18,0	1/1:7,0:7:11.90:162,12,0	1/1:12,0:12:17.91:247,18,0
chr10	21453187	.	TTG	T	6618.01	PASS	AC=46;AF=0.852;AN=54;BaseQRankSum=4.036;DP=537;FS=2.585;HRun=0;HaplotypeScore=166.5838;InbreedingCoeff=0.8326;MQ=53.63;MQ0=7;MQRankSum=-4.593;QD=16.18;ReadPosRankSum=1.660;VQSLOD=4.7524;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,1:31:15.60:0,16,726	1/1:0,3:3:8.94:78,9,0	0/0:32,0:21:23.85:0,24,562	0/0:31,0:8:19.38:0,19,216	1/1:7,16:23:38.69:443,39,0	1/1:2,16:18:41.92:424,42,0	1/1:6,20:26:17.97:206,18,0	1/1:9,20:29:45.08:738,45,0	1/1:8,15:23:38.72:456,39,0	1/1:8,11:19:36.11:452,36,0	./.	1/1:8,11:19:8.66:197,9,0	1/1:6,14:20:30.23:461,30,0	1/1:5,13:18:18.06:233,18,0	0/0:20,0:20:42.10:0,42,666	1/1:7,7:14:11.99:130,12,0	1/1:8,5:12:13.56:135,14,0	1/1:4,12:16:20.93:347,21,0	1/1:5,10:15:27.09:340,27,0	1/1:3,9:11:6.02:76,6,0	1/1:6,7:13:8.99:96,9,0	1/1:6,17:23:39.04:450,39,0	1/1:8,12:21:9.03:110,9,0	1/1:6,9:14:3.01:38,3,0	1/1:3,20:23:11.65:226,12,0	1/1:13,10:24:23.20:453,23,0	1/1:2,15:17:30.06:375,30,0	1/1:1,4:5:14.97:154,15,0
chr10	21453208	.	T	TGAGAGAGA	13085.88	PASS	AB=0.814;AC=33;AF=0.589;AN=56;BaseQRankSum=1.698;DP=605;FS=8.188;HRun=0;HaplotypeScore=233.5652;InbreedingCoeff=0.3868;MQ=43.67;MQ0=18;MQRankSum=-8.705;QD=32.47;ReadPosRankSum=1.374;VQSLOD=3.2445;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:32:54.89:0,55,1307	1/1:9,0:10:8.72:256,9,0	0/0:33,0:16:33.07:0,33,738	0/0:35,0:7:20.90:0,21,367	0/0:24,0:24:35.71:0,36,819	1/1:19,3:22:11.07:224,11,0	1/1:24,5:29:12.53:236,13,0	1/1:26,0:25:69.24:1870,69,0	1/1:20,3:22:35.12:931,35,0	0/1:15,1:16:99:1009,0,134	0/0:15,0:15:0.47:0,0,1	1/1:20,0:22:16.73:447,17,0	1/1:18,2:20:48.39:1328,48,0	1/1:16,4:20:18.53:604,19,0	0/0:22,0:22:42.14:0,42,983	0/1:9,1:19:83.03:440,0,83	0/1:17,0:18:99:267,0,124	0/1:12,5:16:99:1080,0,133	0/1:17,0:17:58.07:690,0,58	0/1:13,0:19:61.74:62,0,67	0/0:16,0:15:6.49:0,6,84	0/0:21,0:22:30.10:0,30,727	1/1:21,0:21:5.85:139,6,0	1/1:17,2:18:3.90:74,4,0	0/1:20,9:28:11.70:135,0,12	1/1:15,2:17:48.16:1432,48,0	1/1:22,4:26:31.02:1354,31,0	1/1:5,0:7:15.05:507,15,0
chr10	21453210	.	A	AGAGAGAGAGTGT	15938.88	PASS	AB=0.983;AC=38;AF=0.679;AN=56;BaseQRankSum=-1.944;DP=652;FS=0.487;HRun=0;HaplotypeScore=256.2156;InbreedingCoeff=0.4551;MQ=42.35;MQ0=16;MQRankSum=-6.770;QD=31.88;ReadPosRankSum=-0.324;VQSLOD=3.6128;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:36,0:33:6.90:7,0,1213	1/1:10,0:10:11.05:408,11,0	0/0:34,0:15:33.25:0,33,741	0/0:35,0:7:20.87:0,21,366	0/0:20,0:25:5.94:0,6,724	1/1:19,4:31:12.04:382,12,0	1/1:27,2:29:10.17:231,10,0	1/1:28,0:27:72.25:1910,72,0	1/1:15,4:26:30.10:1084,30,0	0/1:18,0:17:38.77:1055,0,39	0/0:15,0:15:1.11:0,1,3	1/1:15,5:28:15.26:479,15,0	1/1:19,2:21:50.67:1629,51,0	1/1:21,1:22:26.79:820,27,0	0/0:8,0:21:42.14:0,42,1195	0/1:19,0:19:9.12:487,0,9	0/1:18,0:18:21.63:354,0,22	0/1:16,1:17:99:1202,0,164	1/1:17,0:16:35.34:772,35,0	1/1:19,0:19:7.91:112,8,0	0/1:17,0:16:0.16:0,0,1	0/0:15,0:21:9.30:0,9,732	1/1:17,3:26:5.45:138,5,0	1/1:12,1:23:6.02:110,6,0	1/1:26,3:29:11.12:233,11,0	1/1:13,4:23:66.20:2156,66,0	1/1:18,8:29:45.11:1749,45,0	1/1:4,3:7:15.05:621,15,0
chr10	21453309	.	GC	G	1035.48	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=4.505;DP=548;FS=6.617;HRun=5;HaplotypeScore=64.2560;InbreedingCoeff=0.9924;MQ=79.48;MQ0=0;MQRankSum=0.909;QD=27.99;ReadPosRankSum=0.504;VQSLOD=3.7806;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,108,1456	0/0:9,0:9:27.09:0,27,369	0/0:22,1:23:57.18:0,57,756	0/0:31,0:31:79.50:0,79,1045	1/1:0,21:21:57.16:647,57,0	0/0:12,0:12:36.11:0,36,477	0/0:30,0:30:72.24:0,72,984	0/0:32,0:31:90.28:0,90,1187	0/0:16,0:16:45.14:0,45,596	0/0:18,0:18:48.16:0,48,654	0/0:7,0:7:21.07:0,21,284	0/0:14,0:14:36.12:0,36,492	0/0:20,0:20:54.18:0,54,738	0/0:27,0:27:72.20:0,72,964	0/0:11,0:11:33.11:0,33,451	0/0:10,0:10:30.10:0,30,410	0/0:29,0:29:75.25:0,75,1025	0/0:30,0:30:75.25:0,75,1026	0/0:19,0:19:57.17:0,57,762	0/0:19,0:19:54.18:0,54,738	0/0:26,0:26:66.22:0,66,900	1/1:0,16:16:45.13:511,45,0	0/0:10,0:10:30.10:0,30,408	0/0:18,0:18:48.10:0,48,619	0/0:25,0:25:69.22:0,69,927	0/0:14,0:14:42.14:0,42,574	0/0:14,0:14:42.10:0,42,553	0/0:7,0:7:18.06:0,18,246
chr10	21453477	.	TAAACA	T	7548.55	PASS	AB=0.556;AC=49;AF=0.875;AN=56;BaseQRankSum=7.175;DP=578;FS=0.000;HRun=0;HaplotypeScore=132.7357;InbreedingCoeff=0.6165;MQ=71.88;MQ0=3;MQRankSum=-2.630;QD=15.19;ReadPosRankSum=-0.394;VQSLOD=3.8137;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:72.20:0,72,1928	1/1:0,0:4:12.03:138,12,0	1/1:34,0:26:1.77:7,2,0	0/0:27,0:17:3.48:0,3,44	1/1:12,0:17:9.03:105,9,0	1/1:9,12:21:17.21:573,17,0	1/1:11,7:18:9.03:125,9,0	1/1:22,0:20:6.02:103,6,0	1/1:13,11:24:30.10:538,30,0	1/1:17,0:29:33.10:385,33,0	1/1:13,0:22:14.91:155,15,0	1/1:8,8:16:12.04:215,12,0	1/1:4,17:21:38.96:699,39,0	1/1:10,12:22:27.09:484,27,0	0/0:15,0:15:24.08:0,24,671	1/1:7,0:14:12.04:140,12,0	1/1:22,0:27:12.04:139,12,0	1/1:17,18:35:39.13:699,39,0	1/1:16,0:20:6.96:73,7,0	1/1:10,0:25:21.06:245,21,0	1/1:5,0:10:6.02:69,6,0	1/1:10,0:17:15.04:175,15,0	1/1:6,8:14:21.06:377,21,0	1/1:5,6:10:18.06:323,18,0	1/1:12,11:23:27.09:484,27,0	1/1:9,11:20:36.11:614,36,0	1/1:14,11:25:27.09:484,27,0	0/1:1,4:5:9.38:200,0,9
chr10	21454270	.	C	CT	7355.97	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-16.146;DP=723;FS=0.322;HRun=1;HaplotypeScore=86.0003;InbreedingCoeff=0.9993;MQ=72.79;MQ0=1;MQRankSum=-0.196;QD=40.20;ReadPosRankSum=0.437;VQSLOD=5.1830;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,135,1736	1/1:0,10:10:24.08:360,24,0	0/0:33,0:26:72.03:0,72,857	0/0:27,0:21:60.16:0,60,755	0/0:23,0:23:66.15:0,66,808	0/0:21,0:21:57.19:0,57,740	0/0:27,0:27:78.24:0,78,993	0/0:28,0:28:75.23:0,75,948	0/0:29,0:29:87.28:0,87,1129	1/1:1,23:24:69.20:993,69,0	1/1:1,11:12:27.09:404,27,0	0/0:34,0:34:99:0,102,1321	0/0:26,0:26:75.24:0,75,973	0/0:35,0:35:99:0,99,1282	0/0:33,0:33:99:0,99,1285	1/1:1,30:31:84.28:1259,84,0	1/1:1,29:30:81.27:1214,81,0	0/0:23,0:23:63.18:0,63,802	1/1:1,14:15:39.11:563,39,0	1/1:1,22:23:66.22:989,66,0	1/1:0,38:38:99:1574,105,0	0/0:28,0:28:78.24:0,78,997	0/0:20,0:20:51.17:0,51,662	0/0:22,0:22:63.09:0,63,763	0/0:29,0:29:81.26:0,81,1051	0/0:28,1:29:42.29:0,42,1032	0/0:19,0:19:48.16:0,48,623	0/0:9,0:9:27.09:0,27,351
chr10	21456147	.	TTCTCTC	T	1280.83	PASS	AB=0.845;AC=20;AF=0.417;AN=48;BaseQRankSum=-0.702;DP=532;FS=22.965;HRun=0;HaplotypeScore=120.1673;InbreedingCoeff=0.4029;MQ=71.97;MQ0=20;MQRankSum=3.551;QD=6.10;ReadPosRankSum=2.702;VQSLOD=0.7036;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:41:33:0,33,512	0/0:8,0:7:0.89:0,1,2	./.	./.	0/0:28,0:27:5.69:0,6,83	0/1:20,0:19:17.02:59,0,17	1/1:14,0:13:17.91:256,18,0	./.	0/1:22,0:21:1.27:100,0,1	0/0:21,0:21:17.09:0,17,313	0/0:19,0:19:2.68:0,3,11	1/1:13,1:13:8.93:65,9,0	1/1:21,0:21:17.47:144,17,0	0/1:8,8:16:18.68:45,0,19	1/1:15,0:14:12.67:83,13,0	0/0:17,0:17:3.95:0,4,59	0/0:20,0:20:21.75:0,22,365	0/0:16,0:12:18.02:0,18,339	0/0:13,0:12:6.91:0,7,158	0/0:21,0:21:0.47:0,0,1	./.	0/0:16,0:16:11.07:0,11,238	0/1:6,0:11:14.99:15,0,19	0/1:16,0:14:2.54:50,0,3	1/1:14,0:12:18.44:198,18,0	0/1:12,0:16:10.26:57,0,10	1/1:18,0:17:20.97:273,21,0	1/1:11,0:9:8.97:99,9,0
chr10	21456193	.	C	CTGTG	1253.77	PASS	AB=1.000;AC=29;AF=0.558;AN=52;BaseQRankSum=1.843;DP=469;FS=7.505;HRun=0;HaplotypeScore=124.4759;InbreedingCoeff=0.2502;MQ=43.23;MQ0=36;MQRankSum=-2.174;QD=4.19;ReadPosRankSum=-2.217;VQSLOD=1.4501;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:40:23.91:0,24,207	1/1:11,0:10:12.04:174,12,0	0/0:1,0:1:3.01:0,3,33	./.	1/1:18,0:17:18.03:299,18,0	0/1:19,0:18:8.90:9,0,19	0/0:19,0:17:0.15:0,0,1	0/1:22,0:20:11.34:11,0,16	1/1:20,0:18:2.76:8,3,0	1/1:14,0:13:20.16:244,20,0	1/1:16,0:14:11.87:191,12,0	0/0:18,0:16:0.24:0,0,84	0/1:16,0:16:4.94:5,0,103	./.	0/0:17,0:16:22.10:0,22,243	1/1:12,0:12:3.48:49,3,0	1/1:17,0:17:3.83:20,4,0	1/1:16,0:14:8.13:56,8,0	1/1:6,0:4:3.01:40,3,0	1/1:12,0:11:6.02:90,6,0	1/1:9,0:7:9.02:108,9,0	0/0:11,11:21:3.45:0,3,46	0/1:14,0:13:0.31:0,0,2	0/1:20,0:15:0.45:0,0,33	0/1:30,0:27:21.16:21,0,47	0/1:26,0:26:78.82:79,0,145	0/0:18,0:18:2.69:0,3,37	0/0:14,0:10:0.05:0,0,24
chr10	21456615	.	CA	C	1005.68	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=8.753;DP=666;FS=6.461;HRun=7;HaplotypeScore=74.9860;InbreedingCoeff=0.9907;MQ=77.38;MQ0=0;MQRankSum=-3.345;QD=25.79;ReadPosRankSum=-0.629;VQSLOD=4.0108;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,39:39:99:1101,108,0	0/0:10,0:10:30.10:0,30,377	0/0:11,0:11:20.64:0,21,219	0/0:18,0:18:41.83:0,42,471	0/0:31,0:31:84.27:0,84,1054	0/0:24,0:24:72.21:0,72,882	0/0:25,0:25:69.22:0,69,868	0/0:34,0:34:96.29:0,96,1187	0/0:21,0:21:63.20:0,63,793	0/0:29,0:29:84.27:0,84,1057	0/0:26,0:26:66.20:0,66,817	0/0:33,0:33:93.29:0,93,1162	0/0:22,0:22:60.19:0,60,755	0/0:21,0:21:57.18:0,57,717	0/0:23,0:23:60.19:0,60,755	0/0:15,0:15:45.14:0,45,566	0/0:30,0:30:84.22:0,84,1016	0/0:13,0:13:39.12:0,39,491	0/0:21,0:21:57.17:0,57,706	0/0:30,0:30:81.26:0,81,1019	0/0:11,0:11:33.09:0,33,399	0/0:23,0:23:63.20:0,63,783	0/0:25,0:25:69.22:0,69,868	0/0:16,0:16:48.14:0,48,591	0/0:32,0:32:81.26:0,81,1019	0/0:35,0:35:96.31:0,96,1208	0/0:41,0:41:99:0,111,1351	0/0:7,0:7:21.07:0,21,264
chr10	21457247	.	CAA	C	2330.25	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=10.347;DP=580;FS=4.984;HRun=16;HaplotypeScore=101.0840;InbreedingCoeff=0.9687;MQ=63.42;MQ0=18;MQRankSum=-0.016;QD=14.04;ReadPosRankSum=4.835;VQSLOD=2.9705;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,8:18:18.91:232,19,0	1/1:1,9:10:23.86:201,24,0	0/0:37,0:17:22.07:0,22,185	0/0:36,0:12:7.16:0,7,53	0/0:13,2:23:19.01:0,19,212	0/0:16,0:19:46.17:0,46,493	0/0:20,0:21:45.90:0,46,488	0/0:28,0:26:52.81:0,53,595	0/0:14,0:15:32.71:0,33,313	1/1:10,7:18:29.16:218,29,0	1/1:3,11:15:30.03:236,30,0	0/0:20,0:21:31.15:0,31,474	0/0:23,0:23:53.32:0,53,573	0/0:21,0:23:47.47:0,47,492	0/0:14,0:19:48.92:0,49,488	1/1:4,13:19:32.33:304,32,0	1/1:2,16:20:38.59:343,39,0	0/0:24,0:25:62.39:0,62,668	1/1:12,15:26:20.05:368,20,0	1/1:1,18:21:53.42:425,53,0	1/1:3,10:14:20.83:217,21,0	0/0:6,0:9:13.75:0,14,116	0/0:4,0:13:18.86:0,19,161	0/0:22,0:22:56.68:0,57,588	0/0:19,0:23:55.73:0,56,608	0/0:19,0:19:28.19:0,28,278	0/0:24,1:26:28.31:0,28,491	0/0:8,0:8:9.03:0,9,108
chr10	21457678	.	CACCT	C	410.26	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.740;DP=599;FS=1.867;HRun=0;HaplotypeScore=118.7381;InbreedingCoeff=0.8599;MQ=91.35;MQ0=0;MQRankSum=-1.938;QD=17.09;ReadPosRankSum=0.681;VQSLOD=3.0705;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:18,6:24:7.47:492,7,0	0/0:3,0:3:9.03:0,9,173	0/0:30,0:30:69.72:0,70,2032	0/0:22,0:22:46.70:0,47,1452	0/0:24,0:24:64.79:0,65,517	0/0:17,0:17:51.16:0,51,1356	0/0:26,0:26:78.27:0,78,2074	0/0:26,0:26:78.25:0,78,1990	0/0:20,0:20:60.21:0,60,1616	0/0:15,0:15:45.14:0,45,818	0/0:14,0:14:36:0,36,620	0/0:23,0:23:69.24:0,69,1883	0/0:37,0:37:99:0,111,3031	0/0:23,0:23:69.24:0,69,1850	0/0:37,0:37:99:0,111,2934	0/0:29,0:29:80.47:0,80,1475	0/0:15,0:15:42.14:0,42,774	0/0:10,0:10:30.01:0,30,653	0/0:21,0:21:57.58:0,58,971	0/0:22,0:22:55.38:0,55,994	0/0:20,0:20:56.81:0,57,1013	0/0:18,0:18:44.69:0,45,375	0/0:12,0:12:33.10:0,33,854	0/0:18,0:18:54.11:0,54,1253	0/0:24,0:24:72.24:0,72,1881	0/0:15,0:15:45.15:0,45,1230	0/0:31,0:31:93.27:0,93,2321	0/0:23,0:23:69.24:0,69,1916
chr10	21457681	.	CT	C	1806.42	PASS	AB=1.000;AC=12;AF=0.214;AN=56;BaseQRankSum=4.352;DP=610;FS=2.111;HRun=1;HaplotypeScore=80.3867;InbreedingCoeff=0.4044;MQ=91.63;MQ0=0;MQRankSum=-2.363;QD=9.87;ReadPosRankSum=-2.596;VQSLOD=0.4841;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,15:24:57.06:584,57,0	0/0:3,0:3:8.04:0,8,35	0/0:30,1:32:46.39:0,46,1114	0/0:21,0:21:53.80:0,54,714	1/1:0,24:24:60.16:810,60,0	0/0:16,0:16:48.16:0,48,715	0/0:27,0:27:81.18:0,81,1138	0/0:27,0:27:75.21:0,75,1051	0/0:20,0:20:60.18:0,60,872	0/1:18,0:18:15.72:16,0,110	0/1:14,0:14:13.06:13,0,84	0/0:24,0:24:69.21:0,69,989	0/0:39,0:39:99:0,111,1599	0/0:25,0:25:75.13:0,75,1029	0/0:36,0:36:99:0,108,1527	0/1:30,0:30:24.94:25,0,192	0/1:16,0:16:6.96:7,0,97	0/0:9,0:9:26.79:0,27,344	0/1:21,0:21:78.19:78,0,99	0/0:20,0:20:28.38:0,28,166	0/1:21,0:21:0.26:0,0,122	1/1:0,15:15:33.06:437,33,0	0/0:14,0:14:36.09:0,36,493	0/0:18,0:18:51.11:0,51,675	0/0:25,0:25:69.21:0,69,992	0/0:18,0:18:47.62:0,48,660	0/0:30,0:30:90.25:0,90,1264	0/0:23,0:23:69.20:0,69,989
chr10	21457685	.	CCCT	C	475.30	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.426;DP=600;FS=0.907;HRun=0;HaplotypeScore=106.6014;InbreedingCoeff=0.9664;MQ=89.78;MQ0=0;MQRankSum=-3.033;QD=19.80;ReadPosRankSum=1.918;VQSLOD=3.6453;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,14:24:51.03:570,51,0	0/0:4,0:4:12.04:0,12,237	0/0:31,0:31:82.41:0,82,1581	0/0:17,0:17:25.06:0,25,780	0/0:23,0:23:60.18:0,60,757	0/0:18,0:18:48.13:0,48,952	0/0:27,0:27:66.23:0,66,1402	0/0:27,0:27:72.18:0,72,1460	0/0:20,0:20:60.21:0,60,1294	0/0:19,0:19:57.18:0,57,1110	0/0:12,0:12:36.12:0,36,787	0/0:23,0:23:66.21:0,66,1342	0/0:41,0:41:99:0,111,2319	0/0:23,0:23:60.21:0,60,1269	0/0:34,0:34:96.33:0,96,2083	0/0:27,0:27:78.25:0,78,1649	0/0:16,0:16:45.15:0,45,947	0/0:9,0:9:24.04:0,24,475	0/0:19,0:19:57.20:0,57,1185	0/0:21,0:21:51.16:0,51,1077	0/0:20,0:20:57.06:0,57,1194	0/0:15,0:15:32.85:0,33,438	0/0:17,0:17:51.17:0,51,1023	0/0:16,0:16:39.12:0,39,812	0/0:24,0:24:72.25:0,72,1529	0/0:22,0:22:63.14:0,63,1210	0/0:28,0:28:78.27:0,78,1693	0/0:23,0:23:66.18:0,66,1360
chr10	21458206	.	ATG	A	359.55	PASS	AB=1.000;AC=3;AF=0.056;AN=54;BaseQRankSum=5.143;DP=548;FS=2.293;HRun=0;HaplotypeScore=65.1853;InbreedingCoeff=0.6601;MQ=61.05;MQ0=2;MQRankSum=-0.135;QD=12.84;ReadPosRankSum=1.742;VQSLOD=3.3450;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,13:13:33.11:451,33,0	0/0:8,0:8:24.03:0,24,337	./.	0/1:14,0:7:11.26:11,0,24	0/0:37,0:37:99:0,108,1761	0/0:24,0:24:69.17:0,69,1070	0/0:14,0:14:39.12:0,39,640	0/0:45,0:45:99:0,120,1667	0/0:20,0:20:54.16:0,54,907	0/0:33,0:33:90.23:0,90,1453	0/0:27,0:27:75.23:0,75,1248	0/0:12,0:12:33.11:0,33,577	0/0:19,0:19:54.15:0,54,894	0/0:16,0:16:42.12:0,42,682	0/0:18,0:18:51.16:0,51,869	0/0:12,0:12:36.10:0,36,598	0/0:15,0:15:19.61:0,20,579	0/0:13,0:13:36.09:0,36,568	0/0:20,0:19:51.10:0,51,747	0/0:28,0:28:81.20:0,81,1254	0/0:14,0:14:36.06:0,36,542	0/0:8,0:8:24.05:0,24,362	0/0:16,0:16:48.10:0,48,723	0/0:10,0:10:27.09:0,27,468	0/0:29,0:29:78.23:0,78,1317	0/0:26,0:26:72.21:0,72,1163	0/0:30,0:30:87.20:0,87,1383	0/0:18,0:18:51.07:0,51,754
chr10	21458573	.	TG	T	2008.45	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=10.855;DP=772;FS=3.117;HRun=2;HaplotypeScore=77.2023;InbreedingCoeff=0.7671;MQ=83.90;MQ0=0;MQRankSum=-3.680;QD=26.43;ReadPosRankSum=3.303;VQSLOD=3.5805;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,56:57:99:2103,162,0	0/0:6,0:6:18.06:0,18,270	0/0:31,0:32:76.88:0,77,1021	0/1:19,0:19:0.97:1,0,455	0/0:30,0:30:87.29:0,87,1299	0/0:29,0:29:84.26:0,84,1216	0/0:24,0:24:72.24:0,72,1077	0/0:32,0:32:90.14:0,90,1247	0/0:22,0:22:66.22:0,66,986	0/0:32,0:32:96.32:0,96,1429	0/0:34,0:34:99:0,102,1526	0/0:18,0:18:54.18:0,54,809	0/0:26,0:26:78.26:0,78,1161	0/0:24,0:24:72.19:0,72,1034	0/0:30,0:30:90.30:0,90,1348	0/0:41,0:41:99:0,123,1826	0/0:42,0:42:99:0,123,1843	0/0:16,0:16:48.16:0,48,718	0/0:17,0:17:51.14:0,51,723	0/0:31,0:31:90.29:0,90,1327	0/0:22,0:22:60.20:0,60,898	0/0:27,0:27:78.25:0,78,1148	0/0:23,0:23:69.21:0,69,1010	0/0:24,0:24:72.24:0,72,1079	0/0:38,0:38:99:0,108,1596	0/0:26,0:26:78.26:0,78,1169	0/0:39,0:38:99:0,117,1750	0/0:11,0:11:33.06:0,33,469
chr10	21460119	.	AGG	A	1221.54	PASS	AB=0.969;AC=8;AF=0.143;AN=56;BaseQRankSum=5.155;DP=522;FS=17.121;HRun=12;HaplotypeScore=67.6764;InbreedingCoeff=0.6146;MQ=69.09;MQ0=0;MQRankSum=1.039;QD=12.09;ReadPosRankSum=5.523;VQSLOD=0.4635;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,23:32:54.09:549,54,0	0/0:8,0:8:15.01:0,15,181	0/0:12,0:11:9.03:0,9,133	0/1:11,0:8:5.16:5,0,94	1/1:6,11:18:35.94:339,36,0	0/0:21,1:24:15.92:0,16,451	0/0:22,1:25:11.52:0,12,435	0/0:14,0:15:9.03:0,9,134	0/0:16,0:19:20.51:0,21,207	0/0:11,0:12:14.49:0,14,151	0/0:12,0:12:9.49:0,9,115	0/0:18,0:18:21.30:0,21,259	0/0:21,0:21:24.04:0,24,295	0/0:14,0:14:21.06:0,21,293	0/0:20,0:21:47.60:0,48,592	0/0:15,0:16:26.56:0,27,345	0/0:34,0:41:61.50:0,61,649	0/0:13,1:16:1.39:0,1,289	0/0:11,0:11:15.03:0,15,201	0/1:12,1:15:6.97:7,0,150	0/0:22,0:22:21.92:0,22,253	1/1:9,14:25:47.83:468,48,0	0/0:15,0:15:10.02:0,10,119	0/0:31,1:32:32.65:0,33,811	0/0:19,0:20:23.11:0,23,274	0/0:8,0:8:6.02:0,6,82	0/0:24,0:26:29.07:0,29,370	0/0:11,0:11:17.97:0,18,165
chr10	21460808	.	T	TG	3618.52	PASS	AB=0.676;AC=22;AF=0.393;AN=56;BaseQRankSum=-6.290;DP=559;FS=11.946;HRun=10;HaplotypeScore=69.6397;InbreedingCoeff=0.5683;MQ=83.29;MQ0=0;MQRankSum=-0.589;QD=12.65;ReadPosRankSum=-2.743;VQSLOD=1.4540;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:20:40.98:0,41,326	0/0:9,0:9:20.96:0,21,172	0/0:19,0:19:2.58:0,3,165	0/0:16,0:16:20.24:0,20,144	0/0:17,0:17:26.94:0,27,222	0/1:7,14:21:3.59:170,0,4	1/1:4,21:25:54.14:576,54,0	0/1:16,6:22:6.63:121,0,7	0/1:6,8:14:6.58:142,0,7	0/0:23,0:25:43.01:0,43,332	0/0:24,0:24:59.92:0,60,492	1/1:7,10:17:5.97:52,6,0	1/1:9,14:23:11.45:327,11,0	0/1:8,16:24:28.81:339,0,29	0/0:26,0:28:57.98:0,58,455	0/0:24,0:27:64:0,64,504	0/0:20,0:20:53.92:0,54,443	0/1:17,8:24:99:237,0,102	0/0:16,0:17:32:0,32,252	0/0:21,0:21:20.35:0,20,171	0/0:12,0:14:19.99:0,20,154	0/0:14,0:16:24.62:0,25,184	1/1:7,7:14:18.05:192,18,0	1/1:3,15:18:30.07:319,30,0	0/1:11,10:21:0.58:200,0,1	1/1:10,11:21:5.40:252,5,0	1/1:6,19:25:51.13:542,51,0	1/1:8,7:16:11.18:152,11,0
chr10	21461203	.	GA	G	3040.44	PASS	AB=0.933;AC=21;AF=0.375;AN=56;BaseQRankSum=9.353;DP=492;FS=6.918;HRun=11;HaplotypeScore=61.1951;InbreedingCoeff=0.8551;MQ=72.32;MQ0=0;MQRankSum=2.159;QD=15.75;ReadPosRankSum=0.771;VQSLOD=4.2368;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,2:35:34.89:0,35,762	1/1:2,9:11:20.97:172,21,0	0/1:13,1:10:18.24:18,0,64	0/0:19,0:16:10.98:0,11,110	1/1:2,14:16:38.94:320,39,0	0/0:21,0:22:47.29:0,47,536	0/0:18,1:19:20.47:0,20,416	0/0:23,1:25:35.76:0,36,551	0/0:13,0:13:30.08:0,30,320	1/1:5,15:20:20.95:340,21,0	1/1:6,15:21:41.92:345,42,0	0/0:14,1:16:15.20:0,15,338	0/0:10,0:12:29.85:0,30,282	0/0:9,0:9:21.04:0,21,218	0/0:12,1:14:5.30:0,5,246	1/1:2,13:15:35.96:296,36,0	1/1:5,24:30:65.91:542,66,0	0/0:20,3:23:6.66:0,7,453	1/1:5,17:22:50.92:418,51,0	1/1:2,17:20:46.96:375,47,0	1/1:3,9:13:28.99:228,29,0	1/1:2,8:11:26.01:203,26,0	0/0:16,1:17:26.46:0,26,473	0/0:12,0:14:32.92:0,33,334	0/0:16,0:16:30.08:0,30,320	0/0:22,1:23:38.51:0,39,592	0/0:15,1:16:2.42:0,2,231	0/0:5,0:5:15.04:0,15,160
chr10	21461591	.	T	TA	11085	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-12.869;DP=729;FS=12.402;HRun=2;HaplotypeScore=67.6699;InbreedingCoeff=0.9992;MQ=87.54;MQ0=0;MQRankSum=-6.784;QD=38.36;ReadPosRankSum=4.428;VQSLOD=4.4958;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,48:48:99:1834,129,0	1/1:0,16:16:45.15:648,45,0	0/0:28,0:28:81.22:0,81,964	0/0:25,0:25:72.15:0,72,831	1/1:1,19:20:51.17:734,51,0	0/0:24,0:24:60.17:0,60,731	0/0:30,0:30:90.22:0,90,1097	0/0:27,0:27:75.24:0,75,930	0/0:29,0:29:87.27:0,87,1079	1/1:0,32:32:93.29:1298,93,0	1/1:1,18:19:48.12:668,48,0	0/0:28,0:28:72.14:0,72,872	0/0:24,0:24:66.21:0,66,817	0/0:22,0:22:60.18:0,60,731	0/0:25,0:25:66.19:0,66,806	1/1:1,18:19:19.99:740,20,0	1/1:2,31:33:93.30:1318,93,0	0/0:26,0:26:78.25:0,78,967	1/1:1,20:21:60.20:864,60,0	1/1:2,16:18:45.15:648,45,0	1/1:1,44:45:99:1728,120,0	1/1:0,18:18:42.14:604,42,0	0/0:16,0:16:48.13:0,48,581	0/0:34,0:34:96.26:0,96,1173	0/0:13,0:13:36.10:0,36,435	0/0:45,0:45:99:0,132,1625	0/0:27,0:27:72.23:0,72,892	0/0:17,0:17:48.08:0,48,548
chr10	21461909	.	C	CATTTATTTATTT	4252.49	PASS	AC=16;AF=0.296;AN=54;BaseQRankSum=-4.493;DP=396;FS=1.456;HRun=0;HaplotypeScore=127.1270;InbreedingCoeff=0.8491;MQ=62.51;MQ0=1;MQRankSum=-6.591;QD=45.24;ReadPosRankSum=-3.245;VQSLOD=4.2483;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:50.49:0,50,1766	1/1:6,3:10:6.02:353,6,0	0/0:5,0:6:6:0,6,128	0/0:4,0:3:3:0,3,27	0/0:21,0:22:51.07:0,51,1216	0/0:16,0:16:39.10:0,39,1169	0/0:15,0:15:33.08:0,33,929	0/0:24,0:25:27.08:0,27,765	0/0:14,0:14:33.08:0,33,929	1/1:7,7:18:27.04:1113,27,0	1/1:6,3:10:12:548,12,0	0/0:17,0:17:36.12:0,36,1140	0/0:14,0:14:30.10:0,30,1047	0/0:16,0:16:27.08:0,27,862	0/0:15,0:15:33.07:0,33,927	1/1:9,0:9:6.02:228,6,0	1/1:11,6:22:18.06:1031,18,0	0/0:27,0:27:60.20:0,60,2024	1/1:11,4:17:24.01:604,24,0	1/1:6,0:6:6.02:266,6,0	1/1:2,0:2:3.01:109,3,0	./.	0/0:15,0:15:27.09:0,27,926	0/0:6,0:6:12.03:0,12,339	0/0:17,0:17:39.12:0,39,1281	0/0:16,0:17:27.08:0,27,730	0/0:23,0:23:44.25:0,44,1405	0/0:6,0:6:12:0,12,256
chr10	21463420	.	GTT	G	684.21	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=-1.180;DP=162;FS=3.978;HRun=2;HaplotypeScore=20.5628;InbreedingCoeff=0.6827;MQ=93.44;MQ0=3;MQRankSum=-1.686;QD=15.91;ReadPosRankSum=0.669;VQSLOD=1.0421;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:38.92:0,39,333	1/1:2,0:2:5.99:48,6,0	0/0:10,0:9:19.99:0,20,214	0/0:11,0:7:14.63:0,15,105	0/0:4,0:4:12:0,12,107	0/0:2,0:2:5.97:0,6,47	0/0:6,0:6:17.99:0,18,158	0/0:8,0:8:21.02:0,21,196	0/0:4,0:4:12:0,12,107	1/1:8,0:8:24.03:224,24,0	1/1:5,0:5:14.98:124,15,0	0/0:9,0:9:27.02:0,27,248	0/0:4,0:4:12.01:0,12,110	0/0:4,0:4:12.01:0,12,110	0/0:1,0:1:3:0,3,28	1/1:5,0:5:14.98:125,15,0	0/1:12,0:13:18.55:133,0,19	0/0:11,0:10:29.93:0,30,258	1/1:5,0:5:12:107,12,0	0/0:0,8:8:0:0,0,0	1/1:4,0:4:11.98:97,12,0	0/0:6,0:6:18.02:0,18,166	0/0:2,0:2:6:0,6,52	0/0:2,0:2:6:0,6,53	0/0:2,0:2:6.01:0,6,56	0/0:6,0:6:18.02:0,18,166	0/0:5,0:5:15.01:0,15,135	0/0:1,0:1:2.99:0,3,24
chr10	21464316	.	T	TG	13084.52	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-16.198;DP=809;FS=3.394;HRun=2;HaplotypeScore=73.0943;InbreedingCoeff=1.0000;MQ=97.44;MQ0=0;MQRankSum=-3.942;QD=39.06;ReadPosRankSum=2.781;VQSLOD=5.5409;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,39:39:99:1555,108,0	1/1:0,15:15:41.74:599,42,0	0/0:42,0:42:99:0,120,1451	0/0:37,0:37:96.27:0,96,1162	1/1:0,38:38:99:1554,108,0	0/0:17,0:17:45.14:0,45,558	0/0:23,0:23:66.21:0,66,818	0/0:39,0:39:99:0,108,1327	0/0:27,0:27:81.24:0,81,991	1/1:3,33:36:99:1398,99,0	1/1:1,22:23:66.22:950,66,0	0/0:20,0:20:54.17:0,54,670	0/0:28,0:28:81.25:0,81,1004	0/0:26,0:26:72.19:0,72,854	0/0:29,0:29:84.26:0,84,1041	1/1:3,33:36:87.29:1253,87,0	1/1:4,34:38:99:1469,102,0	0/0:26,0:26:72.20:0,72,877	1/1:1,16:17:45.15:642,45,0	1/1:1,36:37:99:1469,102,0	1/1:0,32:32:81.27:1166,81,0	1/1:1,23:24:72.24:1029,72,0	0/0:19,0:19:57.16:0,57,693	0/0:35,0:35:96.26:0,96,1172	0/0:27,0:27:81.24:0,81,993	0/0:33,0:33:99:0,99,1228	0/0:24,0:24:63.20:0,63,781	0/0:22,0:22:66.21:0,66,818
chr10	21465597	.	TG	T	538.08	PASS	AB=0.857;AC=3;AF=0.054;AN=56;BaseQRankSum=5.290;DP=753;FS=0.000;HRun=9;HaplotypeScore=78.6485;InbreedingCoeff=0.6366;MQ=79.26;MQ0=0;MQRankSum=-2.167;QD=10.98;ReadPosRankSum=0.663;VQSLOD=2.7116;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,25:31:66.03:604,66,0	0/0:13,0:13:36.09:0,36,406	0/0:16,0:16:29.99:0,30,308	0/0:17,2:19:21.08:0,21,356	0/0:9,0:13:14.93:0,15,88	0/0:33,0:33:84.22:0,84,949	0/0:30,0:30:84.24:0,84,960	0/0:26,0:26:66.18:0,66,745	0/0:33,1:34:65.78:0,66,991	0/0:35,0:35:78.22:0,78,891	0/0:11,0:21:28.53:0,29,163	0/0:29,0:29:43.10:0,43,676	0/0:36,0:37:96.12:0,96,1087	0/0:42,0:43:99:0,105,1188	0/0:39,0:39:99:0,99,1129	0/0:30,0:30:78.22:0,78,892	0/0:34,0:34:96.27:0,96,1097	0/0:29,0:29:72.21:0,72,831	0/1:14,3:18:40.28:40,0,339	0/0:24,0:24:60.18:0,60,691	0/0:28,1:29:44.73:0,45,759	0/0:10,0:21:25.95:0,26,149	0/0:23,1:24:29.70:0,30,594	0/0:27,0:27:69.19:0,69,787	0/0:28,0:28:75.17:0,75,831	0/0:33,1:34:56.77:0,57,897	0/0:25,0:25:63.19:0,63,724	0/0:11,0:11:27.08:0,27,312
chr10	21466611	.	A	AC	2645.81	PASS	AB=0.615;AC=17;AF=0.304;AN=56;BaseQRankSum=1.120;DP=503;FS=4.561;HRun=9;HaplotypeScore=58.6678;InbreedingCoeff=0.6517;MQ=86.49;MQ0=0;MQRankSum=-0.023;QD=17.07;ReadPosRankSum=-1.735;VQSLOD=3.3747;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,11:15:21.06:232,21,0	0/1:2,4:6:14.02:88,0,14	0/0:24,0:24:25.47:0,25,262	0/0:15,0:15:17.70:0,18,136	1/1:5,12:17:10.38:337,10,0	0/0:30,1:32:52.83:0,53,676	0/0:14,0:14:35.97:0,36,309	0/0:16,0:16:32.95:0,33,281	0/0:21,0:21:50.96:0,51,439	1/1:7,7:14:24.04:254,24,0	1/1:12,3:15:27.07:298,27,0	0/0:19,0:19:50.98:0,51,441	0/0:28,0:28:71.97:0,72,623	0/0:13,0:14:35.01:0,35,291	0/0:31,0:32:92.02:0,92,787	0/1:7,7:14:64.59:259,0,65	1/1:11,8:19:18.43:413,18,0	0/0:18,0:18:38.98:0,39,339	0/1:4,4:8:11.02:118,0,11	0/1:6,17:23:1:432,0,1	1/1:3,8:11:18.05:199,18,0	0/1:3,10:13:1.99:208,0,2	0/0:15,0:16:43.99:0,44,364	0/0:18,0:18:41:0,41,344	0/0:19,0:20:59.03:0,59,500	0/0:27,2:29:32.78:0,33,514	0/0:26,0:26:49.23:0,49,552	0/0:6,0:6:14.98:0,15,127
chr10	21467553	.	GA	G	4768.48	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=11.035;DP=604;FS=8.517;HRun=10;HaplotypeScore=66.7632;InbreedingCoeff=0.9931;MQ=82.81;MQ0=2;MQRankSum=-3.512;QD=20.47;ReadPosRankSum=3.211;VQSLOD=5.7454;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,24:28:68.07:597,68,0	1/1:0,10:10:23.99:208,24,0	0/0:30,0:26:39.09:0,39,342	0/0:16,0:15:21.11:0,21,234	1/1:4,20:24:47.97:417,48,0	0/0:18,1:20:30.92:0,31,544	0/0:17,0:17:48.10:0,48,513	0/0:31,0:31:69.66:0,70,763	0/0:22,0:22:57.13:0,57,615	1/1:6,23:29:65.96:572,66,0	1/1:3,25:28:65.97:573,66,0	0/0:22,1:23:37.11:0,37,630	0/0:16,0:16:42.10:0,42,453	0/0:24,0:24:54.11:0,54,570	0/0:14,0:14:36.05:0,36,371	1/1:2,14:16:32.98:286,33,0	1/1:2,19:21:50.99:443,51,0	0/0:16,0:16:42.11:0,42,465	1/1:2,14:16:11.73:322,12,0	1/1:0,19:19:47.97:413,48,0	1/1:1,13:14:38.99:339,39,0	1/1:5,23:28:68.97:598,69,0	0/0:21,0:22:50.17:0,50,583	0/0:28,0:28:78.18:0,78,843	0/0:24,0:24:66.14:0,66,706	0/0:31,1:32:61.09:0,61,881	0/0:26,1:28:45.97:0,46,711	0/0:6,0:6:18.05:0,18,199
chr10	21467944	.	AG	A	5826.39	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=11.641;DP=629;FS=1.538;HRun=1;HaplotypeScore=60.0363;InbreedingCoeff=0.9967;MQ=94.08;MQ0=0;MQRankSum=-6.961;QD=39.37;ReadPosRankSum=1.431;VQSLOD=5.4968;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,123,1935	1/1:0,15:15:36.12:504,36,0	0/0:31,0:31:93.31:0,93,1451	0/0:25,0:25:42.74:0,43,1070	0/0:18,0:18:54.17:0,54,839	0/0:21,0:21:60.20:0,60,957	0/0:30,0:30:90.31:0,90,1435	0/0:24,0:24:72.24:0,72,1142	0/0:24,0:24:72.25:0,72,1151	1/1:0,10:10:30.10:419,30,0	1/1:0,9:9:24.08:336,24,0	0/0:24,0:24:72.21:0,72,1123	0/0:28,0:28:84.29:0,84,1333	0/0:29,0:29:87.29:0,87,1376	0/0:26,0:26:78.26:0,78,1214	1/1:0,19:19:57.19:796,57,0	1/1:0,31:31:87.29:1217,87,0	0/0:20,0:20:57.15:0,57,873	1/1:0,20:20:57.19:796,57,0	1/1:0,15:15:42.05:543,42,0	1/1:0,29:29:87.29:1217,87,0	0/0:18,0:18:50.35:0,50,811	0/0:5,0:5:15.05:0,15,240	0/0:30,0:30:90.31:0,90,1438	0/0:22,0:22:66.21:0,66,1032	0/0:24,1:25:33.28:0,33,1100	0/0:30,0:30:90.31:0,90,1424	0/0:10,0:10:27.09:0,27,432
chr10	21468727	.	T	TA	6854.85	PASS	AB=0.563;AC=21;AF=0.375;AN=56;BaseQRankSum=0.544;DP=528;FS=1.154;HRun=7;HaplotypeScore=55.0118;InbreedingCoeff=0.9420;MQ=63.35;MQ0=4;MQRankSum=-0.061;QD=31.30;ReadPosRankSum=1.532;VQSLOD=4.9595;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,21:23:57.17:687,57,0	1/1:1,11:12:33.10:395,33,0	0/0:6,0:5:14.70:0,15,127	0/0:8,0:6:15.02:0,15,145	1/1:3,30:33:84.26:1012,84,0	0/0:20,0:20:57.09:0,57,550	0/0:17,0:17:45.05:0,45,428	0/0:30,0:27:28.56:0,29,594	0/0:18,0:18:51.08:0,51,493	0/1:4,14:18:3.64:459,0,4	1/1:0,17:17:51.16:616,51,0	0/0:15,0:15:45.07:0,45,435	0/0:16,0:16:45.05:0,45,428	0/0:16,0:16:45.04:0,45,424	0/0:18,0:18:42.05:0,42,400	1/1:2,19:21:57.17:689,57,0	1/1:3,24:27:66.12:778,66,0	0/0:16,0:16:36.05:0,36,347	1/1:2,12:14:36.11:435,36,0	1/1:2,26:28:81.19:950,81,0	1/1:0,10:10:30.09:362,30,0	1/1:3,13:16:39.12:471,39,0	0/0:21,0:21:45.04:0,45,425	0/0:11,0:11:30.05:0,30,290	0/0:25,0:25:63.09:0,63,608	0/0:25,0:24:66.10:0,66,637	0/0:24,0:24:63.10:0,63,608	0/0:23,0:23:66.11:0,66,637
chr10	21469160	.	CCTTCCCTGCTTCCCTG	C	7900.04	PASS	AB=0.958;AC=23;AF=0.411;AN=56;BaseQRankSum=11.991;DP=682;FS=18.955;HRun=0;HaplotypeScore=297.4891;InbreedingCoeff=0.8583;MQ=72.93;MQ0=0;MQRankSum=-10.178;QD=33.47;ReadPosRankSum=1.136;VQSLOD=2.3571;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:24,11:35:18.64:920,19,0	1/1:7,8:15:18.06:792,18,0	0/0:35,0:32:20.64:0,21,880	0/0:31,0:30:30.09:0,30,1184	1/1:11,8:19:18.06:792,18,0	0/0:29,0:29:63.22:0,63,4076	0/0:31,0:31:66.23:0,66,4311	0/0:29,0:29:42.14:0,42,1963	0/0:28,0:28:45.15:0,45,2763	1/1:7,6:12:18.04:623,18,0	1/1:9,2:11:6.02:235,6,0	0/0:26,0:26:51.17:0,51,3472	0/0:32,0:32:66.23:0,66,4685	0/0:35,0:35:72.25:0,72,5023	0/0:33,0:33:72.25:0,72,4604	1/1:14,12:26:30.10:1320,30,0	1/1:9,7:16:15.52:606,16,0	0/0:21,0:21:48.16:0,48,2919	1/1:10,6:16:18.06:623,18,0	1/1:7,7:14:15.05:660,15,0	1/1:21,7:28:0.10:193,0,0	1/1:7,13:20:24.08:1056,24,0	0/0:26,0:26:54.19:0,54,3728	0/0:25,0:25:48.16:0,48,3205	0/0:25,0:25:48.16:0,48,3166	0/1:22,1:23:80.82:81,0,2956	0/0:23,0:23:51.16:0,51,3465	0/0:17,0:17:12.04:0,12,701
chr10	21469389	.	ATG	A	212.42	PASS	AB=0.922;AC=13;AF=0.241;AN=54;BaseQRankSum=4.833;DP=763;FS=11.739;HRun=0;HaplotypeScore=146.7061;InbreedingCoeff=-0.1124;MQ=55.96;MQ0=15;MQRankSum=2.961;QD=0.70;ReadPosRankSum=-2.394;VQSLOD=1.4851;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:34.22:0,34,340	0/0:12,0:12:3.01:0,3,37	0/0:41,0:16:10.83:0,11,105	0/0:48,0:22:9:0,9,111	0/0:27,0:27:8.98:0,9,95	0/1:37,2:38:24.28:24,0,943	0/0:36,2:38:43.24:0,43,1033	0/1:15,4:20:63.29:63,0,198	0/1:29,1:30:21.60:22,0,594	0/0:15,0:15:27.07:0,27,321	1/1:14,0:14:2.24:5,2,0	0/1:21,1:24:0.93:1,0,586	0/0:23,0:23:47.37:0,47,727	0/1:20,2:22:1.87:2,0,437	0/0:47,1:48:55.04:0,55,1323	0/0:22,0:21:6:0,6,51	0/0:18,0:18:6.02:0,6,74	0/0:31,0:30:70.98:0,71,1026	0/0:13,0:10:13.69:0,14,231	0/1:20,0:20:0.04:1,0,0	./.	0/1:32,0:31:0.10:0,0,38	0/1:18,2:19:50.94:51,0,463	0/1:37,3:40:32.91:33,0,877	0/0:33,1:34:34.23:0,34,956	0/0:34,0:33:6.59:0,7,870	0/1:29,2:30:32.22:32,0,892	0/1:9,3:12:99:106,0,244
chr10	21469463	.	TCC	T	5820.89	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=11.861;DP=545;FS=10.906;HRun=3;HaplotypeScore=154.4957;InbreedingCoeff=0.9751;MQ=100.59;MQ0=0;MQRankSum=-15.871;QD=39.33;ReadPosRankSum=2.433;VQSLOD=3.5169;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,23:24:60.20:909,60,0	1/1:0,10:10:30.10:458,30,0	0/0:33,0:33:91.52:0,92,1604	0/0:32,0:33:93.08:0,93,1592	1/1:0,11:11:21.07:321,21,0	0/0:22,0:22:60.21:0,60,1159	0/0:25,0:25:72.25:0,72,1357	0/0:33,0:32:99:0,99,1855	0/0:19,0:19:57.18:0,57,1063	1/1:0,21:21:63.21:956,63,0	1/1:1,10:11:24.07:346,24,0	0/0:13,0:13:32.92:0,33,606	0/0:15,0:15:38.96:0,39,753	0/0:19,0:19:57.20:0,57,1099	0/0:31,0:31:87.27:0,87,1595	1/1:2,17:19:54.18:822,54,0	1/1:0,9:9:21.07:321,21,0	0/0:17,0:16:48.16:0,48,897	1/1:2,10:12:30.10:458,30,0	1/1:1,12:13:36.12:542,36,0	1/1:0,3:3:6.02:92,6,0	1/1:0,15:15:39.13:596,39,0	0/0:18,0:18:54.19:0,54,1043	0/0:22,0:21:63.22:0,63,1217	0/0:30,0:30:78.12:0,78,1485	0/0:29,2:31:9.11:0,9,1571	0/0:25,0:24:69.08:0,69,1269	0/0:11,0:11:33.11:0,33,637
chr10	21469518	.	GGTGTGTGTGTGT	G	2393.37	PASS	AB=0.879;AC=13;AF=0.260;AN=50;BaseQRankSum=7.820;DP=584;FS=0.740;HRun=0;HaplotypeScore=263.6038;InbreedingCoeff=0.6320;MQ=67.05;MQ0=11;MQRankSum=-8.053;QD=16.06;ReadPosRankSum=2.208;VQSLOD=2.3844;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:27:15.52:0,16,758	./.	./.	0/0:37,0:23:6.02:0,6,104	1/1:9,0:13:6.02:168,6,0	0/0:21,0:22:42.14:0,42,1998	0/0:30,0:33:54.19:0,54,2620	0/0:27,0:28:36.12:0,36,1404	0/0:22,0:22:48.16:0,48,2241	0/1:24,7:31:99:869,0,145	1/1:10,5:14:5.79:208,6,0	0/0:11,0:11:20.10:0,20,957	0/0:15,0:16:24.08:0,24,1274	0/0:21,0:20:30.10:0,30,1484	0/0:25,0:29:51.14:0,51,2355	1/1:14,6:20:12.04:284,12,0	0/1:17,1:18:98.08:98,0,136	0/0:19,0:19:39.13:0,39,1864	./.	1/1:12,5:17:3.01:84,3,0	0/1:12,2:12:0.13:0,0,0	1/1:8,0:20:30.10:838,30,0	0/0:18,0:18:24.08:0,24,1164	0/0:29,0:28:54.66:0,55,2705	0/0:30,0:29:51.16:0,51,2525	0/0:29,0:28:56.22:0,56,2752	0/0:22,0:21:48.16:0,48,2246	0/0:6,0:6:12.04:0,12,390
chr10	21469888	.	ACTCT	A	371.68	PASS	AB=0.911;AC=20;AF=0.455;AN=44;BaseQRankSum=3.653;DP=409;FS=2.039;HRun=0;HaplotypeScore=84.7923;InbreedingCoeff=0.3137;MQ=81.21;MQ0=9;MQRankSum=-2.808;QD=2.25;ReadPosRankSum=0.378;VQSLOD=1.6920;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:22:19:43,0,19	1/1:5,0:5:3:25,3,0	./.	./.	1/1:16,0:16:3.78:11,4,0	1/1:5,0:8:6:54,6,0	0/1:13,1:15:34.52:35,0,93	0/0:32,0:32:0.47:0,0,1	0/0:17,0:17:5.65:0,6,43	1/1:14,0:14:2.62:29,3,0	0/0:11,0:11:0.41:0,0,1	0/0:8,0:8:2.94:0,3,27	0/0:17,0:17:17.63:0,18,239	0/0:13,0:13:11.96:0,12,157	0/1:13,6:19:1.73:84,0,2	1/1:12,0:12:9.01:83,9,0	1/1:10,0:10:5.97:44,6,0	./.	0/1:15,0:13:3.24:38,0,3	1/1:14,0:12:1.89:7,2,0	0/0:15,0:14:3:0,3,25	1/1:15,0:15:5.56:54,6,0	./.	0/0:3,0:3:3.01:0,3,70	./.	0/0:15,0:15:6.01:0,6,98	0/0:15,0:15:12.03:0,12,189	./.
chr10	21469922	.	TCTCTCTCTCTCTCTCC	T	856.57	PASS	AB=0.932;AC=12;AF=0.222;AN=54;BaseQRankSum=1.833;DP=320;FS=3.539;HRun=0;HaplotypeScore=119.4127;InbreedingCoeff=0.2021;MQ=48.34;MQ0=29;MQRankSum=-0.269;QD=8.24;ReadPosRankSum=-1.338;VQSLOD=2.2653;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:25:21.34:478,21,0	0/1:3,0:3:8.95:9,0,80	1/1:5,0:2:2.04:6,2,0	./.	1/1:16,1:16:6.49:111,6,0	0/0:10,0:9:17.39:0,17,388	0/0:18,0:16:12.91:0,13,1166	0/0:19,0:17:21.04:0,21,667	0/0:11,0:9:15.51:0,16,524	0/0:15,0:14:3.12:0,3,389	0/0:10,0:9:4.74:0,5,46	0/0:7,0:7:20.77:0,21,284	0/0:14,0:14:24.64:0,25,867	0/0:11,0:11:21.06:0,21,721	0/0:13,0:13:23.93:0,24,627	0/0:10,0:10:12.04:0,12,158	0/1:12,0:12:40.09:40,0,204	0/0:1,0:1:3:0,3,25	0/1:12,0:9:33.32:33,0,211	0/1:10,0:9:40.28:40,0,99	0/0:20,0:19:12.01:0,12,174	0/1:4,9:12:8.29:273,0,8	0/0:8,0:7:8.99:0,9,76	0/0:7,0:5:6.02:0,6,453	0/0:7,0:7:14.32:0,14,107	0/0:10,0:9:26.57:0,27,978	0/0:12,0:11:27.52:0,28,820	0/1:6,0:3:13.69:14,0,32
chr10	21469924	.	TCTCTCTCTCTCTCC	T	824.41	PASS	AB=1.000;AC=14;AF=0.259;AN=54;BaseQRankSum=3.145;DP=318;FS=0.675;HRun=0;HaplotypeScore=112.5815;InbreedingCoeff=0.1267;MQ=48.78;MQ0=30;MQRankSum=0.304;QD=6.60;ReadPosRankSum=0.229;VQSLOD=2.0986;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:24:41.59:493,42,0	0/1:3,0:3:9.16:9,0,51	1/1:6,0:2:2.04:6,2,0	./.	1/1:4,10:14:5.96:49,6,0	0/0:11,0:10:20.39:0,20,348	0/0:19,0:17:15.90:0,16,1040	0/0:20,0:18:23.63:0,24,575	0/0:11,0:9:15.49:0,15,394	0/1:15,0:14:33.45:33,0,228	0/1:11,0:10:5.29:5,0,29	0/0:8,0:8:20.77:0,21,240	0/0:14,0:14:24.62:0,25,750	0/0:11,0:11:21.05:0,21,602	0/0:14,0:13:23.87:0,24,495	0/0:10,0:10:10.80:0,11,78	0/1:13,0:13:46.43:46,0,114	0/0:1,0:1:3:0,3,25	0/1:10,0:7:38.80:39,0,133	0/1:9,0:8:39.37:46,0,39	0/0:20,0:19:12.01:0,12,173	0/1:12,0:11:15.59:212,0,16	0/0:8,0:7:6:0,6,51	0/0:7,0:5:6.02:0,6,400	0/0:6,0:6:14.32:0,14,107	0/0:11,0:10:30.07:0,30,870	0/0:12,0:11:27.51:0,28,699	0/1:6,0:3:8.97:38,0,9
chr10	21469928	.	TCTCTCTCTCC	T	1112.37	PASS	AB=0.946;AC=16;AF=0.286;AN=56;BaseQRankSum=3.228;DP=309;FS=0.000;HRun=0;HaplotypeScore=94.8465;InbreedingCoeff=0.1678;MQ=49.41;MQ0=29;MQRankSum=0.616;QD=7.83;ReadPosRankSum=2.545;VQSLOD=1.3172;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:22:20.64:367,21,0	0/1:3,0:3:12.99:48,0,13	0/1:7,0:3:0.83:1,0,24	0/1:9,0:3:4.99:5,0,10	0/1:15,0:14:0.29:2,0,0	0/0:11,0:10:19.94:0,20,190	0/0:18,0:16:12.43:0,12,689	0/0:20,0:18:18.93:0,19,384	0/0:9,0:7:11.97:0,12,182	0/1:6,9:14:33.87:156,0,34	0/1:10,1:10:11.10:66,0,11	0/0:6,0:6:17.73:0,18,169	0/0:15,0:15:23.83:0,24,481	0/0:11,0:11:24.02:0,24,437	0/0:15,0:14:22.62:0,23,284	0/1:10,0:10:10.90:114,0,11	1/1:11,0:11:1.97:108,2,0	0/0:1,0:1:3:0,3,25	0/1:11,0:8:6.42:109,0,6	0/1:9,0:8:12.07:71,0,12	0/0:21,0:20:6.01:0,6,72	0/1:11,0:11:4.17:174,0,4	0/0:5,0:4:3:0,3,26	0/0:7,0:5:6.02:0,6,297	0/0:6,0:6:14.32:0,14,107	0/0:11,0:10:27.06:0,27,596	0/0:11,0:10:24.52:0,25,488	1/1:6,0:3:5.54:46,6,0
chr10	21469930	.	TCTCTCTCC	T	1461.30	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=2.949;DP=309;FS=3.884;HRun=0;HaplotypeScore=87.6026;InbreedingCoeff=0.6184;MQ=51.69;MQ0=29;MQRankSum=-0.786;QD=10.15;ReadPosRankSum=2.402;VQSLOD=1.7834;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:23:7.70:317,8,0	1/1:3,0:3:5.95:101,6,0	0/1:6,0:3:0.83:1,0,24	0/1:10,0:4:5.95:6,0,9	1/1:15,0:14:5.98:48,6,0	0/0:10,0:9:6.27:0,6,118	0/0:17,0:15:12.40:0,12,513	0/0:20,0:18:16.68:0,17,340	0/0:8,0:6:12.02:0,12,177	1/1:13,0:12:17.53:191,18,0	1/1:4,7:10:6.52:54,7,0	0/0:6,0:6:17.72:0,18,131	0/0:15,0:15:27.44:0,27,447	0/0:11,0:11:24:0,24,328	0/0:14,0:13:19.50:0,20,179	1/1:1,10:11:9.03:260,9,0	1/1:12,0:12:7.46:175,7,0	0/0:1,0:1:3:0,3,25	1/1:11,0:8:23.70:219,24,0	0/1:10,0:9:13.71:65,0,14	0/0:4,17:20:2.98:0,3,22	1/1:12,0:11:9.03:167,9,0	0/0:5,0:4:3:0,3,26	0/0:7,0:5:6.02:0,6,245	0/0:6,0:6:14.79:0,15,107	0/0:10,0:9:24.04:0,24,440	0/0:14,0:13:33.48:0,33,462	1/1:6,0:3:5.91:46,6,0
chr10	21469934	.	TCTCC	T	1120.49	PASS	AB=1.000;AC=24;AF=0.444;AN=54;BaseQRankSum=4.299;DP=310;FS=8.576;HRun=0;HaplotypeScore=76.4265;InbreedingCoeff=0.5963;MQ=54.28;MQ0=25;MQRankSum=-1.442;QD=7.28;ReadPosRankSum=3.418;VQSLOD=0.5836;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:23:26.23:306,26,0	1/1:2,0:2:5.95:55,6,0	0/0:8,0:5:2.18:0,2,52	0/0:11,0:6:1.54:0,2,29	1/1:15,0:14:5.96:44,6,0	0/0:10,0:9:2.01:0,2,85	0/1:19,0:17:10.94:11,0,276	0/0:21,0:19:18.40:0,18,281	0/0:7,0:6:10.61:0,11,72	1/1:11,0:10:19.38:138,19,0	1/1:10,0:9:3.10:12,3,0	0/0:8,0:8:21.16:0,21,151	0/0:15,0:15:20.87:0,21,259	0/0:11,0:11:19.83:0,20,200	0/1:15,0:14:19.53:20,0,123	1/1:10,0:10:9.03:121,9,0	1/1:12,0:12:7.49:165,7,0	0/0:1,0:1:3:0,3,25	1/1:2,8:9:25.33:217,25,0	1/1:9,0:8:8.90:78,9,0	./.	1/1:11,0:10:8.90:96,9,0	0/0:6,0:5:6:0,6,53	0/0:7,0:5:6.02:0,6,138	0/0:7,0:7:17.32:0,17,134	0/0:10,0:9:23.05:0,23,287	0/0:14,0:13:30.05:0,30,307	1/1:6,0:3:5.84:46,6,0
chr10	21472152	.	ACACACGCACACACG	A	3026.62	PASS	AB=0.983;AC=22;AF=0.393;AN=56;BaseQRankSum=4.119;DP=448;FS=40.534;HRun=0;HaplotypeScore=153.8549;InbreedingCoeff=0.6653;MQ=47.22;MQ0=20;MQRankSum=-1.332;QD=13.95;ReadPosRankSum=-1.362;VQSLOD=1.3481;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:22:27.61:322,28,0	1/1:6,0:6:15.90:199,16,0	0/0:36,0:9:8.92:0,9,74	0/1:34,0:7:5.11:5,0,134	1/1:18,2:19:17.47:306,17,0	0/0:10,0:10:24.07:0,24,423	0/0:18,0:18:39.35:0,39,978	0/0:24,0:22:44.95:0,45,547	0/0:4,0:4:6.01:0,6,229	1/1:12,0:11:12:434,12,0	1/1:16,1:17:21.45:263,21,0	0/0:8,0:8:11.57:0,12,356	0/0:10,0:10:24.52:0,25,441	0/0:10,0:10:15.55:0,16,686	0/0:9,0:7:18.05:0,18,611	1/1:20,0:18:25.69:312,26,0	1/1:10,0:10:16.23:178,16,0	0/0:18,0:18:45.04:0,45,1646	0/1:13,1:12:30.03:516,0,30	1/1:13,0:13:7.68:103,8,0	0/1:16,0:15:25.12:55,0,25	1/1:17,2:18:31.32:521,31,0	0/0:12,0:11:29.97:0,30,989	0/0:21,0:21:51.10:0,51,1977	0/0:21,0:20:36.08:0,36,1325	0/1:14,0:13:17.60:18,0,1187	0/0:20,0:20:47.85:0,48,1314	0/0:10,0:10:21.94:0,22,495
chr10	21472154	.	ACACGCACACACG	A	3204.40	PASS	AB=1.000;AC=22;AF=0.393;AN=56;BaseQRankSum=4.374;DP=428;FS=43.245;HRun=0;HaplotypeScore=135.0471;InbreedingCoeff=0.7376;MQ=46.74;MQ0=20;MQRankSum=-4.376;QD=15.48;ReadPosRankSum=-1.970;VQSLOD=1.0017;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:18:26.49:318,26,0	1/1:6,0:6:17.99:241,18,0	0/0:34,0:7:9.43:0,9,75	0/1:34,0:7:6.41:6,0,134	1/1:19,0:18:17.39:264,17,0	0/0:10,0:10:24.07:0,24,399	0/0:16,0:16:39.37:0,39,869	0/0:22,0:20:47.85:0,48,557	0/0:4,0:4:6.01:0,6,206	1/1:11,0:10:26.96:503,27,0	1/1:16,1:17:21.09:262,21,0	0/0:7,0:7:9.99:0,10,304	0/0:10,0:10:24.05:0,24,394	0/0:10,0:10:15.17:0,15,615	0/0:8,0:6:18.05:0,18,543	1/1:18,2:18:25.71:380,26,0	1/1:9,1:10:16.27:194,16,0	0/0:19,0:19:47.41:0,47,1465	0/1:14,0:12:0.62:574,0,1	1/1:11,1:12:7.56:103,8,0	0/1:16,0:15:4.05:55,0,4	1/1:15,1:15:31.26:504,31,0	0/0:11,0:10:29.97:0,30,889	0/0:21,0:21:51.10:0,51,1763	0/0:20,0:19:36.08:0,36,1190	0/1:14,0:13:5.84:6,0,1012	0/0:19,0:19:47.38:0,47,1157	0/0:10,0:10:21.94:0,22,453
chr10	21472156	.	ACGCACACACG	A	3563.35	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=4.351;DP=425;FS=37.654;HRun=0;HaplotypeScore=122.4491;InbreedingCoeff=0.8305;MQ=46.46;MQ0=19;MQRankSum=-2.484;QD=18.37;ReadPosRankSum=-2.581;VQSLOD=0.8556;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:17:26.49:318,26,0	1/1:6,0:6:18.05:282,18,0	0/0:32,0:6:4.04:0,4,67	0/1:34,0:7:6.46:6,0,134	1/1:19,0:18:16.74:253,17,0	0/0:10,0:10:24.07:0,24,398	0/0:16,0:16:39.38:0,39,767	0/0:23,0:21:50.40:0,50,571	0/0:4,0:4:6.01:0,6,184	1/1:8,3:10:29.12:538,29,0	1/1:12,5:17:20.37:259,20,0	0/0:7,0:7:3.26:0,3,251	0/0:10,0:10:23.88:0,24,369	0/0:10,0:10:15.07:0,15,546	0/0:8,0:6:18.05:0,18,476	1/1:15,5:18:25.73:387,26,0	1/1:10,0:10:15.91:194,16,0	0/0:19,0:19:47.42:0,47,1322	1/1:13,2:13:23.99:666,24,0	1/1:11,2:13:7.22:102,7,0	1/1:14,1:15:9.62:71,10,0	1/1:15,1:15:31.31:486,31,0	0/0:11,0:10:29.97:0,30,796	0/0:20,0:20:51.10:0,51,1553	0/0:18,0:17:36.08:0,36,1052	0/0:13,0:13:3.77:0,4,904	0/0:19,0:19:47.94:0,48,1034	0/0:10,0:10:21.94:0,22,409
chr10	21472209	.	CATATATATAT	C	1313.30	PASS	AB=0.741;AC=15;AF=0.313;AN=48;BaseQRankSum=4.402;DP=352;FS=3.519;HRun=0;HaplotypeScore=124.3343;InbreedingCoeff=0.5325;MQ=41.98;MQ0=16;MQRankSum=-3.217;QD=6.57;ReadPosRankSum=0.243;VQSLOD=2.4960;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:14,1:30:1.25:3,1,0	0/0:2,3:5:1.25:0,1,3	./.	./.	0/1:12,0:20:0.38:0,0,0	0/0:9,0:9:15.05:0,15,540	0/0:3,0:3:0:0,0,0	0/0:27,0:27:51.08:0,51,1554	./.	1/1:11,7:17:20.91:566,21,0	0/1:14,9:22:0:0,0,0	0/0:3,0:3:3.01:0,3,119	0/0:4,0:4:6.02:0,6,245	0/0:6,0:5:3.01:0,3,104	0/0:6,0:6:9.03:0,9,372	1/1:9,10:18:8.91:231,9,0	1/1:11,0:10:9.03:277,9,0	0/0:21,0:21:51.05:0,51,1851	1/1:17,1:16:8.97:255,9,0	0/1:11,8:20:0:0,0,0	./.	0/1:9,0:16:0:0,0,0	0/0:8,0:6:6.02:0,6,172	0/0:13,0:12:8.34:0,8,322	0/0:11,0:11:15.05:0,15,645	0/1:20,1:21:99:114,0,916	0/0:13,0:11:27.09:0,27,1051	0/0:7,0:5:15.05:0,15,513
chr10	21473226	.	C	CATG	11196.34	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-12.321;DP=613;FS=63.430;HRun=0;HaplotypeScore=85.1591;InbreedingCoeff=0.9998;MQ=89.68;MQ0=0;MQRankSum=-5.400;QD=52.08;ReadPosRankSum=1.759;VQSLOD=2.2804;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,30:34:81.28:1833,81,0	1/1:0,12:13:30.10:692,30,0	0/0:26,0:26:66.23:0,66,1120	0/0:27,0:27:72.22:0,72,1154	1/1:3,14:18:36.12:829,36,0	0/0:14,0:14:36.12:0,36,614	0/0:29,0:29:87.28:0,87,1458	0/0:27,0:27:66.22:0,66,1094	0/0:31,0:31:93.28:0,93,1521	1/1:1,14:16:48.14:982,48,0	1/1:0,14:14:39.13:879,39,0	0/0:25,0:25:69.24:0,69,1175	0/0:17,0:17:48.15:0,48,779	0/0:31,0:31:93.27:0,93,1516	0/0:30,0:30:84.29:0,84,1423	1/1:3,21:25:57.20:1272,57,0	1/1:2,22:27:51.18:1162,51,0	0/0:15,0:15:42.14:0,42,699	1/1:3,10:15:42.13:900,42,0	1/1:2,14:17:39.13:883,39,0	1/1:0,14:14:29.70:675,30,0	1/1:3,19:22:48.16:1089,48,0	0/0:13,0:13:36.12:0,36,610	0/0:34,0:34:99:0,99,1682	0/0:17,0:17:48.16:0,48,814	0/0:20,0:20:60.20:0,60,998	0/0:27,0:26:81.28:0,81,1363	0/0:15,0:15:45.15:0,45,767
chr10	21473939	.	TTC	T	124.09	PASS	AB=0.975;AC=12;AF=0.250;AN=48;BaseQRankSum=2.778;DP=537;FS=1.021;HRun=0;HaplotypeScore=80.2843;InbreedingCoeff=-0.0451;MQ=67.95;MQ0=16;MQRankSum=1.428;QD=0.71;ReadPosRankSum=1.391;VQSLOD=0.9351;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:28:7.20:0,7,65	0/1:10,0:9:23.69:24,0,74	./.	0/0:27,0:22:2.22:0,2,7	./.	./.	0/0:25,0:23:5.82:0,6,69	0/0:35,0:35:10.13:0,10,57	0/1:15,0:15:24.28:24,0,68	0/1:18,0:16:8.06:8,0,228	0/0:13,0:13:6.69:0,7,115	0/0:9,0:7:1.80:0,2,5	0/0:17,0:12:12.12:0,12,115	0/0:17,0:17:1.61:0,2,4	1/1:10,0:10:7.88:49,8,0	0/1:14,2:16:35.71:56,0,36	0/1:15,2:17:58.92:59,0,156	0/1:18,0:15:2.79:3,0,6	0/0:23,0:23:13.05:0,13,123	0/1:14,0:14:2.70:14,0,3	0/0:25,0:22:8.37:0,8,77	./.	0/0:10,0:10:2.69:0,3,8	0/1:22,0:23:4.10:4,0,5	0/0:22,0:21:4.95:0,5,31	0/0:24,0:23:1.27:0,1,77	0/1:20,0:19:3.21:3,0,14	0/1:12,0:8:0.38:0,0,20
chr10	21473977	.	CTCTCTG	C	1305.91	PASS	AB=0.998;AC=23;AF=0.460;AN=50;BaseQRankSum=0.845;DP=621;FS=6.354;HRun=0;HaplotypeScore=83.0617;InbreedingCoeff=-0.3284;MQ=34.77;MQ0=121;MQRankSum=0.521;QD=2.58;ReadPosRankSum=-0.009;VQSLOD=0.9254;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:35,0:21:6.69:67,0,7	0/0:11,0:7:9:0,9,113	./.	./.	./.	0/0:20,16:27:4.83:0,5,19	0/1:31,0:18:10.01:10,0,53	0/1:20,0:19:6.88:7,0,55	0/0:17,0:14:12.45:0,12,103	0/1:33,0:19:99:121,0,128	0/1:15,0:14:11.96:12,0,69	0/1:17,0:11:15.83:33,0,16	0/1:26,0:18:2.21:87,0,2	0/1:21,0:19:13.07:67,0,13	0/1:25,0:19:6.95:212,0,7	0/1:25,0:12:4.18:4,0,90	0/0:24,0:14:22.49:0,22,250	1/1:14,6:10:4.57:69,5,0	0/1:22,0:17:10.44:55,0,10	1/1:19,0:14:4:20,4,0	0/1:31,0:15:4.41:4,0,18	0/0:7,0:7:0:0,0,0	0/1:19,0:16:12.92:46,0,13	0/1:25,0:18:43.55:144,0,44	1/1:21,0:19:10.80:107,11,0	0/1:35,0:29:99:143,0,218	0/1:36,0:22:30.78:80,0,31	0/1:29,1:14:37.95:161,0,38
chr10	21473981	.	CTG	C	830.44	PASS	AB=0.990;AC=25;AF=0.521;AN=48;BaseQRankSum=3.426;DP=617;FS=19.579;HRun=0;HaplotypeScore=71.2163;InbreedingCoeff=-0.5718;MQ=34.06;MQ0=124;MQRankSum=3.294;QD=1.56;ReadPosRankSum=-1.291;VQSLOD=0.0244;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:34,0:20:32.59:125,0,33	0/1:10,0:6:0.23:0,0,98	./.	./.	./.	0/0:36,0:27:4.83:0,5,19	0/1:32,0:17:9.55:10,0,64	0/0:23,0:22:16.66:0,17,274	0/1:16,0:13:52.50:53,0,74	0/1:35,0:21:33.64:34,0,281	0/1:14,0:13:15.87:16,0,48	0/1:17,1:12:27.71:28,0,30	0/1:25,0:18:14.48:20,0,14	0/1:22,0:20:15.35:52,0,15	0/1:25,0:19:36.19:42,0,36	0/1:25,0:12:26.51:27,0,45	0/1:24,0:14:16.57:17,0,189	1/1:21,0:11:5.47:30,5,0	0/1:20,0:15:41.25:41,0,99	1/1:18,1:14:5.85:47,6,0	0/1:26,0:10:6.29:6,0,51	./.	0/1:20,0:17:12.97:32,0,13	0/1:24,1:18:31.27:31,0,65	1/1:19,0:17:8.62:67,9,0	0/1:35,0:29:99:115,0,266	0/1:35,0:21:29.70:115,0,30	0/1:29,1:14:29.86:66,0,30
chr10	21474003	.	GTCTC	G	668.11	PASS	AB=1.000;AC=15;AF=0.300;AN=50;BaseQRankSum=1.640;DP=576;FS=3.828;HRun=0;HaplotypeScore=75.5278;InbreedingCoeff=0.3196;MQ=32.62;MQ0=127;MQRankSum=1.393;QD=3.04;ReadPosRankSum=-0.089;VQSLOD=1.5068;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:14:8.65:0,9,83	1/1:8,0:4:2.98:22,3,0	./.	./.	0/1:16,0:12:6.02:6,0,21	0/0:31,0:22:9.48:0,9,103	0/0:26,0:11:7.89:0,8,53	0/0:22,0:21:55.80:0,56,618	0/0:18,0:15:9.03:0,9,115	0/1:33,0:19:50.82:198,0,51	./.	0/0:17,0:11:4.56:0,5,79	0/1:21,0:14:23.56:24,0,26	1/1:20,0:18:2.36:20,2,0	0/1:22,0:16:2.56:3,0,61	1/1:27,1:16:12.47:159,12,0	0/1:22,0:13:27.19:70,0,27	0/0:19,0:10:3.48:0,3,31	1/1:7,10:12:13.24:221,13,0	0/0:16,0:11:0:0,0,1	1/1:32,0:13:8.98:94,9,0	0/0:15,0:15:8.73:0,9,61	0/0:17,0:14:3.01:0,3,40	0/0:26,0:18:15.50:0,16,205	0/0:18,0:16:0.94:0,1,3	0/0:38,0:30:64.39:0,64,878	0/0:33,0:18:14.82:0,15,203	0/0:26,0:11:19.20:0,19,180
chr10	21474007	.	CTCTCTG	C	935.40	PASS	AB=0.973;AC=25;AF=0.481;AN=52;BaseQRankSum=4.201;DP=575;FS=1.392;HRun=0;HaplotypeScore=82.4190;InbreedingCoeff=0.0283;MQ=33.30;MQ0=126;MQRankSum=1.995;QD=2.42;ReadPosRankSum=-1.839;VQSLOD=1.4510;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:32,0:18:25.65:44,0,26	1/1:7,0:4:2.50:9,2,0	./.	./.	1/1:16,0:12:5.36:31,5,0	0/0:30,0:21:6.94:0,7,29	0/1:26,0:11:9.62:24,0,10	0/0:24,0:23:41.74:0,42,201	0/1:17,3:17:3.55:4,0,60	0/1:30,0:17:11.05:208,0,11	1/1:7,0:6:2.88:15,3,0	0/1:17,1:12:32.14:58,0,32	0/1:19,2:14:1.58:144,0,2	1/1:18,2:18:8.96:143,9,0	0/1:21,0:15:18.86:19,0,36	0/0:27,0:15:3.35:0,3,9	0/1:22,0:13:27.55:32,0,28	1/1:18,0:9:4.37:25,4,0	1/1:18,0:13:12.39:104,12,0	0/0:16,0:11:0:0,0,0	1/1:32,0:14:11.47:114,11,0	0/1:15,0:15:7.88:8,0,13	0/0:17,0:14:2.88:0,3,15	0/0:25,0:17:9.83:0,10,121	0/0:8,11:18:1.77:0,2,4	0/1:36,0:28:99:101,0,289	0/0:30,0:16:4.81:0,5,98	0/1:26,0:11:0.45:0,0,58
chr10	21474011	.	CTG	C	1372.05	PASS	AB=0.968;AC=31;AF=0.596;AN=52;BaseQRankSum=3.311;DP=570;FS=5.918;HRun=0;HaplotypeScore=67.0475;InbreedingCoeff=-0.1109;MQ=33.80;MQ0=124;MQRankSum=2.995;QD=2.87;ReadPosRankSum=-3.668;VQSLOD=-0.7004;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:32,1:20:7.17:217,7,0	1/1:3,4:4:3.01:41,3,0	./.	./.	1/1:16,0:12:8.96:68,9,0	0/1:29,0:20:14.68:15,0,27	0/1:25,0:10:5.98:75,0,6	0/1:24,0:23:5.55:6,0,287	0/1:19,0:16:32.90:33,0,96	1/1:32,0:19:29.29:310,29,0	1/1:8,0:7:5.99:50,6,0	0/1:16,0:12:39.81:68,0,40	0/1:20,0:13:0.75:67,0,1	1/1:21,0:19:5.57:38,6,0	0/1:19,2:15:6.60:69,0,7	0/1:17,10:15:9.32:45,0,9	0/1:21,0:11:2.25:33,0,2	0/1:17,0:9:19.47:19,0,24	1/1:17,0:12:28.23:200,28,0	1/1:15,2:12:2.86:25,3,0	1/1:30,2:14:8.14:85,8,0	0/1:14,1:15:20.49:20,0,44	0/0:16,0:13:2.88:0,3,15	0/1:26,0:18:9.05:9,0,102	0/0:19,0:18:0.94:0,1,2	0/1:35,0:28:26.56:27,0,407	0/0:30,0:16:7.84:0,8,116	0/0:27,0:12:9.55:0,10,107
chr10	21474013	.	G	GTCTC	984.62	PASS	AB=0.952;AC=34;AF=0.708;AN=48;BaseQRankSum=-1.323;DP=578;FS=2.241;HRun=0;HaplotypeScore=83.8398;InbreedingCoeff=-0.1305;MQ=33.98;MQ0=126;MQRankSum=-1.420;QD=2.01;ReadPosRankSum=-3.266;VQSLOD=1.0789;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:34,0:21:32.61:61,0,33	1/1:7,0:4:2.50:9,2,0	./.	./.	1/1:16,0:12:5.36:31,5,0	1/1:26,1:19:2.97:24,3,0	1/1:25,0:10:8.66:57,9,0	1/1:26,0:25:7.80:32,8,0	0/1:13,0:16:11.84:12,0,32	0/1:34,0:21:13.43:91,0,13	1/1:7,0:6:5.87:40,6,0	0/1:16,0:12:1.26:80,0,1	1/1:18,1:13:11.52:157,12,0	1/1:19,0:18:9.03:169,9,0	0/1:21,0:15:15.53:16,0,25	0/0:26,0:14:3.44:0,3,26	0/1:22,0:12:2:16,0,2	1/1:16,0:9:5.52:32,6,0	0/0:17,0:12:0.75:0,1,4	1/1:19,0:14:3:25,3,0	1/1:33,0:15:8.48:99,8,0	0/1:16,0:16:6.84:7,0,31	./.	0/1:27,0:19:18.08:18,0,41	1/1:21,0:19:0.94:2,1,0	0/1:32,0:25:34.77:127,0,35	0/1:21,8:18:8.14:8,0,40	./.
chr10	21474553	.	TAC	T	1125.63	PASS	AB=0.890;AC=36;AF=0.750;AN=48;BaseQRankSum=1.825;DP=598;FS=45.929;HRun=0;HaplotypeScore=101.7732;InbreedingCoeff=0.3871;MQ=64.81;MQ0=4;MQRankSum=-2.438;QD=2.96;ReadPosRankSum=-2.898;VQSLOD=-0.0381;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:33:1.89:0,2,61	1/1:4,0:4:2.84:14,3,0	./.	./.	0/0:21,0:21:21.01:0,21,214	1/1:16,2:18:3.95:33,4,0	0/1:24,3:27:14.22:238,0,14	./.	0/1:19,3:21:26.12:26,0,37	1/1:22,0:22:3.31:15,3,0	1/1:19,0:19:8.52:42,9,0	1/1:15,4:19:14.98:161,15,0	1/1:13,2:15:12.50:130,13,0	1/1:21,2:22:8.85:78,9,0	0/0:18,0:23:12.01:0,12,121	1/1:19,0:19:14.20:70,14,0	1/1:22,0:22:2.84:14,3,0	1/1:18,0:18:2.87:32,3,0	1/1:17,0:17:8.52:42,9,0	1/1:29,0:29:11.36:56,11,0	0/0:24,0:24:0:0,0,0	0/0:23,0:23:27.04:0,27,304	./.	1/1:20,3:24:2.99:32,3,0	1/1:27,2:32:17.68:147,18,0	1/1:25,0:25:2.52:31,3,0	1/1:18,2:20:8.85:78,9,0	1/1:2,1:3:3.01:32,3,0
chr10	21474593	.	CACACACACTG	C	4319.84	PASS	AB=0.877;AC=17;AF=0.304;AN=56;BaseQRankSum=5.197;DP=665;FS=2.640;HRun=0;HaplotypeScore=181.1184;InbreedingCoeff=0.5896;MQ=61.85;MQ0=13;MQRankSum=-1.023;QD=19.82;ReadPosRankSum=2.316;VQSLOD=4.1554;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:41:34.36:0,34,932	0/1:6,1:7:7.66:222,0,8	0/0:29,0:13:21.79:0,22,639	0/0:36,0:25:51.25:0,51,1211	0/1:24,0:24:99:297,0,787	0/0:19,0:18:35.95:0,36,725	0/0:37,0:37:93.32:0,93,2212	0/0:32,0:31:84.95:0,85,1315	0/0:24,0:23:39.12:0,39,1013	1/1:2,11:12:33.11:595,33,0	1/1:1,20:21:9.03:313,9,0	0/0:26,0:25:45:0,45,1246	0/0:24,0:24:63.19:0,63,1425	0/0:27,0:26:69.22:0,69,1479	0/0:21,0:21:48.16:0,48,1186	0/1:1,24:25:1.09:552,0,1	1/1:2,18:19:5.86:126,6,0	0/0:20,0:20:52.06:0,52,1180	1/1:0,14:14:42.14:776,42,0	1/1:0,21:21:12.04:416,12,0	1/1:20,0:20:51.17:782,51,0	0/1:28,0:28:99:190,0,1261	0/0:16,0:16:38.75:0,39,709	0/0:44,0:44:99:0,111,2162	0/0:21,0:21:57.18:0,57,1430	0/1:25,0:25:52.26:52,0,974	0/0:26,0:25:75.25:0,75,1421	0/0:3,0:3:9.03:0,9,191
chr10	21474601	.	CTG	C	3755.85	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=5.415;DP=586;FS=3.172;HRun=0;HaplotypeScore=94.2983;InbreedingCoeff=0.8636;MQ=73.30;MQ0=11;MQRankSum=0.666;QD=16.26;ReadPosRankSum=0.743;VQSLOD=3.3559;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,29:29:6.02:98,6,0	1/1:5,2:7:15.05:205,15,0	0/0:38,0:22:48.88:0,49,1087	0/0:39,0:28:48.25:0,48,1269	1/1:23,2:25:52.67:697,53,0	0/0:17,0:16:39.04:0,39,608	0/0:34,0:34:86.65:0,87,1207	0/0:30,0:29:75.25:0,75,1309	0/0:16,0:15:35.99:0,36,578	1/1:11,0:11:30.10:417,30,0	1/1:20,0:20:9.02:89,9,0	0/0:24,0:23:45.10:0,45,593	0/0:19,0:19:56.94:0,57,736	0/0:21,0:21:57.21:0,57,830	0/0:18,0:18:48.15:0,48,767	1/1:24,0:24:21.02:203,21,0	1/1:19,0:19:3.48:30,3,0	0/0:12,0:12:35.91:0,36,516	1/1:14,0:14:42.12:552,42,0	1/1:21,0:21:12.02:117,12,0	1/1:21,0:21:54.18:794,54,0	1/1:18,0:18:42.69:528,43,0	0/0:12,0:12:27.08:0,27,449	0/0:31,0:31:81.06:0,81,1320	0/0:18,0:18:50.96:0,51,679	0/1:21,0:21:26.70:27,0,794	0/0:23,0:22:66.06:0,66,971	0/0:3,0:3:8.92:0,9,104
chr10	21475885	.	AACACAC	A	216.46	PASS	AB=0.842;AC=4;AF=0.074;AN=54;BaseQRankSum=2.692;DP=511;FS=12.350;HRun=0;HaplotypeScore=114.2669;InbreedingCoeff=0.4510;MQ=60.62;MQ0=25;MQRankSum=-2.675;QD=5.03;ReadPosRankSum=-3.160;VQSLOD=0.6130;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:30:38.97:0,39,607	0/0:3,0:6:7.55:0,8,209	0/0:42,0:17:0:0,0,0	./.	1/1:10,9:19:14.91:151,15,0	0/0:24,0:24:41.28:0,41,850	0/0:19,0:20:32.53:0,33,651	0/0:23,0:22:11.95:0,12,135	0/0:12,0:16:18.03:0,18,450	0/0:12,0:14:29.20:0,29,516	0/0:8,0:10:17.09:0,17,382	0/0:9,0:9:15.05:0,15,391	0/0:12,0:15:24.55:0,25,557	0/1:10,0:11:44.79:45,0,364	0/0:8,0:6:9.02:0,9,220	0/0:9,0:13:29.93:0,30,656	0/0:8,0:13:6:0,6,103	0/0:21,0:22:32.27:0,32,901	0/0:9,0:11:18.06:0,18,409	0/0:12,0:16:27.16:0,27,799	0/0:25,0:27:33.05:0,33,657	0/1:7,6:13:3.30:131,0,3	0/0:8,0:8:12.04:0,12,300	0/0:20,0:19:27.09:0,27,737	0/0:29,0:29:57.19:0,57,1453	0/0:20,0:18:39.08:0,39,908	0/0:21,0:21:45.36:0,45,1069	0/0:2,0:1:3.01:0,3,82
chr10	21475952	.	G	GTA	4539.95	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=0.962;DP=443;FS=1.014;HRun=0;HaplotypeScore=81.3093;InbreedingCoeff=0.9696;MQ=83.10;MQ0=0;MQRankSum=-5.335;QD=38.47;ReadPosRankSum=-1.279;VQSLOD=6.2806;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:26:66.15:0,66,828	1/1:2,5:7:15.05:253,15,0	0/0:16,0:13:17.08:0,17,197	0/0:23,0:23:23.76:0,24,276	0/0:23,0:23:42.03:0,42,517	0/0:21,0:21:54.16:0,54,681	0/0:14,0:14:15.05:0,15,193	0/0:28,1:29:60.19:0,60,772	0/0:14,0:14:27.56:0,28,347	1/1:7,16:23:63.22:1061,63,0	1/1:4,7:11:26.88:416,27,0	0/0:8,0:8:24.08:0,24,309	0/0:16,0:16:36.07:0,36,429	0/0:13,0:13:33.11:0,33,424	0/0:9,0:9:27.09:0,27,347	1/1:6,5:11:21.07:351,21,0	1/1:1,11:12:36.12:598,36,0	0/0:21,0:21:54.17:0,54,693	1/1:13,8:21:6.42:600,6,0	1/1:4,12:16:42.14:706,42,0	1/1:5,12:17:33.11:555,33,0	0/0:6,0:6:15.05:0,15,193	0/0:8,0:8:24.08:0,24,309	0/0:11,0:11:21.07:0,21,270	0/0:21,0:21:60.17:0,60,744	0/0:21,0:21:51.16:0,51,645	0/0:16,0:16:41.98:0,42,500	0/0:7,0:7:18.03:0,18,202
chr10	21476587	.	GAGA	G	1768.42	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=9.035;DP=785;FS=6.208;HRun=0;HaplotypeScore=134.6139;InbreedingCoeff=1.0000;MQ=80.10;MQ0=0;MQRankSum=-4.229;QD=36.09;ReadPosRankSum=2.214;VQSLOD=4.0937;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,48:47:99:1863,111,0	0/0:17,0:17:51.18:0,51,1158	0/0:37,0:36:96.32:0,96,2046	0/0:27,0:27:75.26:0,75,1677	0/0:36,0:36:99:0,108,2437	0/0:25,0:25:71.83:0,72,1596	0/0:30,0:30:81.27:0,81,1825	0/0:38,0:38:99:0,108,2408	0/0:25,0:25:69.24:0,69,1588	0/0:30,0:30:83.96:0,84,1861	0/0:19,0:19:57.18:0,57,1211	0/0:27,0:27:78.19:0,78,1703	0/0:32,0:32:96.30:0,96,2092	0/0:39,0:39:99:0,117,2533	0/0:37,0:37:99:0,108,2446	0/0:27,0:27:78.27:0,78,1760	0/0:31,0:31:90.29:0,90,2022	0/0:19,0:19:57.16:0,57,1261	0/0:24,0:24:69.23:0,69,1507	0/0:24,0:24:69.24:0,69,1591	0/0:34,0:34:99:0,99,2120	0/0:26,0:26:72.21:0,72,1600	0/0:21,0:21:57.20:0,57,1284	0/0:27,0:27:81.28:0,81,1846	0/0:20,0:20:60.21:0,60,1384	0/0:31,0:31:93.31:0,93,2097	0/0:17,0:17:51.18:0,51,1171	0/0:16,0:16:48.12:0,48,1057
chr10	21477339	.	C	CATT	15390.42	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=14.983;DP=683;FS=0.000;HRun=0;HaplotypeScore=108.3683;InbreedingCoeff=0.9974;MQ=87.33;MQ0=1;MQRankSum=-8.188;QD=57.86;ReadPosRankSum=1.309;VQSLOD=6.8567;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,23:26:69.16:1493,69,0	1/1:1,7:8:24.08:550,24,0	0/0:26,0:26:69.24:0,69,1134	0/0:24,0:24:66.23:0,66,1113	1/1:3,36:40:96.29:2161,96,0	0/0:38,0:38:99:0,108,1832	0/0:33,0:33:96.30:0,96,1579	0/0:32,0:32:90.28:0,90,1458	0/0:22,0:22:66.23:0,66,1112	1/1:4,33:36:99:2434,108,0	1/1:1,29:30:78.22:1749,78,0	0/0:24,0:24:52.36:0,52,1157	0/0:29,0:29:81.28:0,81,1371	0/0:18,0:18:51.17:0,51,860	0/0:26,0:26:72.25:0,72,1224	1/1:3,11:14:36.09:781,36,0	1/1:3,14:17:42.10:918,42,0	0/0:19,0:19:51.17:0,51,870	1/1:4,19:24:66.19:1422,66,0	1/1:1,21:22:60.16:1302,60,0	1/1:1,20:21:51.13:1126,51,0	1/1:1,25:27:63.22:1453,63,0	0/0:23,0:23:69.22:0,69,1151	0/0:20,0:20:57.20:0,57,972	0/0:14,0:14:42.12:0,42,688	0/0:32,0:32:96.33:0,96,1638	0/0:32,0:31:96.30:0,96,1566	0/0:5,0:5:15.05:0,15,256
chr10	21479447	.	A	AT	1645.29	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-0.050;DP=660;FS=5.841;HRun=8;HaplotypeScore=68.7100;InbreedingCoeff=0.9943;MQ=86.34;MQ0=0;MQRankSum=-0.167;QD=28.37;ReadPosRankSum=0.585;VQSLOD=4.1434;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:56:99:0,152,1353	0/0:7,0:7:18.01:0,18,165	0/0:17,0:17:41.38:0,41,334	0/0:25,0:27:30.35:0,30,359	1/1:3,34:37:99:1144,102,0	0/0:20,0:20:57.03:0,57,522	0/0:27,0:27:75.03:0,75,686	0/0:21,0:21:56.91:0,57,499	0/0:24,0:24:68.98:0,69,612	0/0:32,0:32:90.02:0,90,815	0/0:15,0:15:38.23:0,38,336	0/0:20,0:20:54.02:0,54,494	0/0:23,0:23:64.84:0,65,577	0/0:21,0:21:54.01:0,54,489	0/0:17,0:17:50.94:0,51,447	0/0:22,0:22:57.03:0,57,522	0/0:33,0:33:92.95:0,93,835	0/0:22,1:23:31.36:0,31,526	0/0:19,0:19:54.02:0,54,490	0/0:19,0:19:54.03:0,54,494	0/0:23,0:23:62.99:0,63,566	1/1:2,19:21:54.16:623,54,0	0/0:21,0:21:60:0,60,540	0/0:26,0:26:72:0,72,648	0/0:27,0:27:60.87:0,61,542	0/0:29,0:29:69.01:0,69,627	0/0:25,0:25:75.02:0,75,680	0/0:8,0:8:24:0,24,216
chr10	21480938	.	ATCTGAGGGTGTCTC	A	3412.11	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.598;DP=643;FS=2.503;HRun=0;HaplotypeScore=249.2092;InbreedingCoeff=0.9987;MQ=82.20;MQ0=0;MQRankSum=-8.697;QD=72.60;ReadPosRankSum=1.821;VQSLOD=2.9892;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,153,9349	0/0:9,0:9:27.09:0,27,1662	0/0:17,0:16:42.14:0,42,2578	0/0:24,0:24:72.21:0,72,3709	1/1:1,24:25:36.12:1454,36,0	0/0:19,0:19:54.19:0,54,3523	0/0:33,0:33:87.30:0,87,5821	0/0:35,0:34:93.31:0,93,5573	0/0:18,0:18:54.18:0,54,3330	0/0:25,0:25:75.26:0,75,4721	0/0:13,0:13:39.13:0,39,2545	0/0:24,0:24:69.24:0,69,4495	0/0:19,0:19:57.20:0,57,3736	0/0:16,0:16:45.15:0,45,2981	0/0:24,0:24:69.22:0,69,4267	0/0:23,0:23:66.23:0,66,4522	0/0:30,0:30:84.29:0,84,5622	0/0:27,0:27:66.19:0,66,4007	0/0:19,0:19:54.05:0,54,3314	0/0:25,0:25:63.22:0,63,4237	0/0:44,0:44:99:0,117,7878	1/1:2,20:22:48.16:1958,48,0	0/0:14,0:14:39.03:0,39,2394	0/0:24,0:24:69.13:0,69,4256	0/0:14,0:14:39.12:0,39,2281	0/0:17,0:17:48.16:0,48,3110	0/0:21,0:20:60.21:0,60,3734	0/0:9,0:9:27.09:0,27,1890
chr10	21481009	.	TCACA	T	1694.30	PASS	AB=0.737;AC=31;AF=0.596;AN=52;BaseQRankSum=-3.111;DP=615;FS=8.414;HRun=0;HaplotypeScore=117.5310;InbreedingCoeff=0.7089;MQ=53.88;MQ0=23;MQRankSum=0.453;QD=5.07;ReadPosRankSum=0.165;VQSLOD=1.9152;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:27,15:42:6.80:84,0,7	0/0:5,0:5:9.02:0,9,123	./.	./.	1/1:17,0:16:10.59:70,11,0	1/1:24,0:23:7.11:80,7,0	1/1:16,12:28:6.02:82,6,0	0/0:24,0:23:0:0,0,0	1/1:15,3:19:13.58:153,14,0	0/0:28,0:28:26.67:0,27,374	0/0:14,0:14:3.82:0,4,60	1/1:14,8:22:2.80:46,3,0	1/1:12,0:12:14.48:166,14,0	1/1:10,0:10:6.01:68,6,0	0/0:24,0:21:30.01:0,30,508	0/0:24,0:23:8.98:0,9,166	0/0:34,0:34:15.46:0,15,225	1/1:16,10:26:16.26:222,16,0	0/0:14,0:13:15.91:0,16,164	0/0:14,0:14:10.08:0,10,109	0/0:34,0:33:12.10:0,12,170	1/1:11,1:12:20.73:240,21,0	1/1:14,8:21:8.57:121,9,0	1/1:22,15:36:14.24:231,14,0	1/1:9,0:9:4.29:44,4,0	1/1:20,0:20:12.02:74,12,0	1/1:19,1:19:13.04:104,13,0	1/1:9,1:9:8.51:93,9,0
chr10	21482760	.	A	ACG	6386.05	PASS	AB=0.948;AC=17;AF=0.304;AN=56;BaseQRankSum=-8.842;DP=1092;FS=65.990;HRun=0;HaplotypeScore=200.3880;InbreedingCoeff=0.1041;MQ=48.05;MQ0=42;MQRankSum=8.490;QD=10.43;ReadPosRankSum=7.380;VQSLOD=1.6458;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:60,5:61:24.64:766,25,0	0/0:8,0:8:17.91:0,18,139	0/0:27,0:8:23.96:0,24,208	0/0:35,0:10:20.28:0,20,220	0/0:13,0:12:8.97:0,9,70	0/1:32,1:30:11.79:409,0,12	1/1:58,3:55:18.42:685,18,0	0/0:25,0:20:37.76:0,38,404	1/1:46,3:47:7.71:551,8,0	0/0:42,0:34:95.67:0,96,837	0/0:21,0:19:35.90:0,36,288	0/1:63,3:60:99:489,0,119	0/1:51,3:50:17.36:604,0,17	0/1:41,2:39:34.36:355,0,34	0/0:48,0:48:94.48:0,94,867	0/0:46,0:44:79.45:0,79,707	0/0:44,0:42:99:0,102,772	0/1:30,2:31:99:315,0,155	0/0:28,0:22:58.54:0,59,414	0/0:31,0:29:48.34:0,48,387	0/0:99,0:91:99:0,143,1097	0/0:12,0:12:11.78:0,12,99	0/1:22,0:21:16.56:121,0,17	0/1:45,9:54:1.86:855,0,2	0/1:37,1:35:78.31:292,0,78	0/1:60,1:59:99:615,0,194	0/1:18,1:19:12.09:156,0,12	0/1:12,1:13:34.59:172,0,35
chr10	21482837	.	AAC	A	7901.38	PASS	AB=0.695;AC=15;AF=0.268;AN=56;BaseQRankSum=3.016;DP=1490;FS=40.345;HRun=0;HaplotypeScore=310.6742;InbreedingCoeff=-0.3443;MQ=47.82;MQ0=66;MQRankSum=5.068;QD=8.00;ReadPosRankSum=6.673;VQSLOD=2.8629;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:35,45:75:99:876,0,227	0/0:12,0:12:21.07:0,21,332	0/1:22,0:2:0.61:1,0,42	0/0:26,0:2:6.02:0,6,79	0/0:11,0:8:0:0,0,0	0/1:20,22:40:99:277,0,259	0/1:44,36:72:99:353,0,901	0/0:40,1:35:52.14:0,52,1313	0/1:48,54:93:99:607,0,598	0/0:60,0:59:99:0,159,2537	0/0:20,0:20:54.18:0,54,873	0/1:57,35:76:99:744,0,307	0/1:44,49:80:99:528,0,606	0/1:51,27:67:99:597,0,435	0/0:51,1:52:97.23:0,97,2079	0/0:43,2:43:78.22:0,78,1196	0/0:35,0:34:74.87:0,75,1121	0/1:29,21:49:99:409,0,1038	0/0:20,0:13:27:0,27,383	0/0:28,0:28:63.20:0,63,1026	0/0:146,0:140:99:0,280,4486	0/0:6,0:6:3.47:0,3,26	0/1:20,35:54:99:809,0,163	0/1:39,45:80:99:553,0,526	0/1:33,27:60:99:299,0,1036	0/1:58,25:72:99:951,0,836	0/1:13,26:38:99:552,0,331	0/1:12,16:28:99:346,0,438
chr10	21482849	.	CAT	C	2503.70	PASS	AB=0.995;AC=16;AF=0.286;AN=56;BaseQRankSum=16.018;DP=1477;FS=51.296;HRun=0;HaplotypeScore=309.9611;InbreedingCoeff=-0.2804;MQ=46.95;MQ0=84;MQRankSum=5.575;QD=2.62;ReadPosRankSum=6.035;VQSLOD=1.1721;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:86,0:79:99:286,0,278	0/0:15,0:15:27.04:0,27,416	0/0:29,0:2:1.07:0,1,19	0/0:35,0:2:6.02:0,6,106	0/0:7,0:4:0:0,0,0	0/1:38,0:36:81.67:82,0,303	0/1:84,0:70:69.17:69,0,1042	0/0:36,0:32:77.98:0,78,1429	0/1:97,1:89:99:226,0,754	0/0:62,0:60:99:0,142,2681	0/0:22,0:21:57.09:0,57,887	0/1:88,0:71:99:242,0,393	0/1:94,1:80:99:230,0,663	0/1:77,0:64:99:222,0,545	0/0:53,0:52:99:0,125,2329	0/0:38,0:36:66.85:0,67,1333	0/0:33,0:32:72.59:0,73,1259	0/1:48,0:47:99:135,0,1170	0/0:17,0:10:23.84:0,24,337	0/0:24,0:23:60.20:0,60,1109	0/0:149,0:142:99:0,270,4818	1/1:3,0:3:2.99:24,3,0	0/1:52,0:51:99:281,0,280	0/1:79,1:77:99:166,0,561	0/1:60,0:59:53.95:54,0,1181	0/1:82,0:66:99:286,0,885	0/1:39,0:38:99:220,0,428	0/1:26,1:27:99:137,0,506
chr10	21482941	.	CAT	C	2482.47	PASS	AB=0.992;AC=22;AF=0.440;AN=50;BaseQRankSum=12.828;DP=1000;FS=1.597;HRun=0;HaplotypeScore=203.2639;InbreedingCoeff=0.3075;MQ=40.83;MQ0=54;MQRankSum=-4.241;QD=4.32;ReadPosRankSum=5.593;VQSLOD=2.7073;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:40,0:34:8.37:139,8,0	0/0:14,0:14:14.99:0,15,247	./.	0/0:29,0:4:12.01:0,12,150	./.	1/1:16,0:15:7.26:48,7,0	0/1:37,0:27:33.04:111,0,33	0/1:35,0:28:99:140,0,195	0/1:56,1:52:9.98:254,0,10	0/0:38,0:36:77.56:0,78,1522	0/0:16,0:14:12.01:0,12,164	0/1:77,1:63:34.74:105,0,35	0/1:57,1:47:13.15:254,0,13	1/1:60,0:44:30.76:192,31,0	0/0:64,0:64:99:0,171,3008	0/0:46,0:44:60.16:0,60,994	0/0:34,0:34:21.80:0,22,564	1/1:14,0:14:10.07:169,10,0	0/0:24,0:17:50.69:0,51,749	0/0:27,0:27:18.46:0,18,284	0/0:114,1:106:99:0,120,1778	./.	0/1:32,0:31:43.11:109,0,43	1/1:25,0:21:9.92:50,10,0	0/1:20,0:18:42.68:79,0,43	0/1:64,1:49:55.64:580,0,56	1/1:27,0:24:49.06:323,49,0	1/1:10,0:10:17.57:110,18,0
chr10	21482943	.	TAC	T	6402.24	PASS	AC=30;AF=0.600;AN=50;BaseQRankSum=5.810;DP=984;FS=8.546;HRun=0;HaplotypeScore=186.7105;InbreedingCoeff=0.9303;MQ=40.52;MQ0=56;MQRankSum=-4.127;QD=11.35;ReadPosRankSum=1.915;VQSLOD=3.6271;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:21,19:34:33.09:409,33,0	0/0:12,0:12:12.01:0,12,188	./.	0/0:31,0:4:11.77:0,12,142	./.	1/1:7,9:15:7.56:114,8,0	1/1:16,21:27:26.79:341,27,0	1/1:24,7:24:48.12:571,48,0	1/1:21,33:49:50.41:653,50,0	0/0:38,0:36:91.71:0,92,1301	0/0:15,0:14:6.02:0,6,97	1/1:33,44:62:7.26:266,7,0	1/1:36,22:47:43.84:511,44,0	1/1:29,33:45:32.44:389,32,0	0/0:64,0:64:99:0,168,2641	0/0:45,0:43:47.79:0,48,751	0/0:35,0:35:42.72:0,43,585	1/1:8,7:15:16.13:405,16,0	0/0:23,0:16:37.95:0,38,603	0/0:27,0:27:15.49:0,15,229	0/0:112,0:103:80.84:0,81,1239	./.	1/1:15,17:31:38.39:434,38,0	1/1:9,15:20:9.03:117,9,0	1/1:7,12:17:15.05:195,15,0	1/1:37,26:47:34.44:1184,34,0	1/1:10,16:24:48.15:599,48,0	1/1:3,7:10:18.90:213,19,0
chr10	21482953	.	CAT	C	2655.60	PASS	AB=0.994;AC=27;AF=0.540;AN=50;BaseQRankSum=9.486;DP=965;FS=1.694;HRun=0;HaplotypeScore=195.6705;InbreedingCoeff=0.7002;MQ=39.12;MQ0=73;MQRankSum=-1.423;QD=5.09;ReadPosRankSum=1.607;VQSLOD=2.9427;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:36,0:29:28.81:153,29,0	0/0:14,0:14:11.94:0,12,126	./.	0/0:32,0:4:5.09:0,5,126	./.	1/1:17,0:15:7.22:47,7,0	1/1:41,0:25:26.34:144,26,0	1/1:25,0:17:8.46:186,8,0	1/1:47,1:43:48.58:322,49,0	0/0:41,0:38:45.14:0,45,1082	0/0:14,0:13:6:0,6,82	0/1:73,0:58:22.35:115,0,22	1/1:47,1:38:21.32:264,21,0	1/1:61,0:44:29.14:175,29,0	0/0:71,0:70:99:0,183,3026	0/0:49,0:46:38.25:0,38,625	0/0:37,0:37:36.59:0,37,582	0/1:15,0:14:3.77:157,0,4	0/0:26,0:18:28.18:0,28,531	0/0:27,0:27:12.49:0,12,231	0/0:109,0:100:74.34:0,74,1002	./.	1/1:27,1:26:34.38:202,34,0	1/1:22,0:19:8.63:45,9,0	1/1:15,0:14:14.61:92,15,0	0/1:56,1:43:25.20:502,0,25	1/1:25,0:21:47.10:325,47,0	1/1:11,0:10:18.22:123,18,0
chr10	21482975	.	TACACAG	T	6809.84	PASS	AB=0.651;AC=29;AF=0.604;AN=48;BaseQRankSum=9.433;DP=825;FS=4.938;HRun=0;HaplotypeScore=163.7639;InbreedingCoeff=-0.0830;MQ=36.79;MQ0=92;MQRankSum=-5.917;QD=11.22;ReadPosRankSum=-3.134;VQSLOD=3.0538;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:18,10:22:33.93:34,0,170	0/1:1,8:9:0:0,0,0	./.	0/0:33,0:2:6.02:0,6,151	./.	1/1:6,8:12:5.59:92,6,0	0/1:24,11:16:46.97:101,0,47	0/1:13,16:20:12.94:716,0,13	1/1:16,23:33:32.86:575,33,0	0/1:6,31:34:99:1499,0,123	./.	0/1:20,34:41:90.04:132,0,90	0/1:20,16:26:41.88:343,0,42	0/0:16,24:27:1.30:0,1,87	0/0:72,0:70:99:0,174,5691	1/1:3,42:42:15.33:344,15,0	0/1:7,27:34:65.19:379,0,65	0/1:6,3:8:99:209,0,107	0/1:9,10:11:81.21:323,0,81	0/0:4,22:25:3:0,3,25	1/1:18,87:95:2.99:24,3,0	./.	1/1:10,9:16:6.01:75,6,0	1/1:4,14:15:2.99:24,3,0	1/1:5,8:12:11.99:128,12,0	0/1:19,18:27:99:1102,0,348	1/1:6,11:14:20.97:481,21,0	1/1:4,6:8:12.01:227,12,0
chr10	21483024	.	G	GCA	33.33	PASS	AB=1.000;AC=17;AF=0.327;AN=52;BaseQRankSum=5.519;DP=625;FS=21.048;HRun=0;HaplotypeScore=113.4096;InbreedingCoeff=0.5031;MQ=43.90;MQ0=42;MQRankSum=-5.185;QD=0.28;ReadPosRankSum=-2.582;VQSLOD=0.2730;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:14,5:13:6.02:0,6,75	0/0:9,0:9:12.02:0,12,150	0/0:18,0:5:2.75:0,3,37	0/0:20,0:2:3:0,3,28	./.	0/1:7,0:6:0.01:0,0,0	0/1:11,0:4:0:0,0,0	0/0:35,0:28:56.72:0,57,703	1/1:14,0:11:4.18:24,4,0	0/0:43,0:42:93.65:0,94,1146	0/0:19,0:18:21.07:0,21,262	1/1:28,0:22:2.71:20,3,0	0/1:14,0:7:0:0,0,0	0/0:22,0:13:0.69:0,1,2	0/0:65,0:64:99:0,141,1755	0/0:42,0:41:36.04:0,36,443	0/0:35,0:35:63.09:0,63,778	1/1:5,1:5:5.75:61,6,0	0/0:21,0:16:44.84:0,45,510	0/0:27,0:28:50.82:0,51,591	0/0:115,1:110:99:0,108,1274	./.	0/1:9,0:7:0.02:0,0,0	1/1:9,2:10:2.95:19,3,0	0/0:6,0:5:0:0,0,0	0/1:12,0:10:11.54:12,0,46	1/1:5,0:4:2.95:20,3,0	1/1:2,0:2:0.89:2,1,0
chr10	21483296	.	G	GACTGTGCTA	2299.09	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-2.727;DP=572;FS=46.597;HRun=0;HaplotypeScore=151.9870;InbreedingCoeff=0.9898;MQ=79.89;MQ0=1;MQRankSum=-6.769;QD=82.11;ReadPosRankSum=0.023;VQSLOD=1.9293;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:63.22:0,63,1966	0/0:13,0:13:39.13:0,39,1207	0/0:21,0:21:59.92:0,60,1589	0/0:9,0:9:27.09:0,27,751	1/1:6,11:20:36.12:1677,36,0	0/0:25,0:25:75.26:0,75,2367	0/0:15,0:15:39.13:0,39,1141	0/0:31,0:31:93.31:0,93,2677	0/0:19,0:19:57.18:0,57,1664	0/0:23,0:23:69.24:0,69,2071	0/0:14,0:14:42.14:0,42,1251	0/0:19,0:19:54.18:0,54,1658	0/0:23,0:23:69.24:0,69,2158	0/0:14,0:14:42.14:0,42,1327	0/0:18,0:18:54.17:0,54,1595	0/0:27,0:27:81.26:0,81,2492	0/0:34,0:34:99:0,102,3090	0/0:20,0:20:57.17:0,57,1624	0/0:24,0:24:66.21:0,66,1868	0/0:30,0:30:90.30:0,90,2694	0/0:22,0:22:63.20:0,63,1812	1/1:4,4:7:15.05:740,15,0	0/0:21,0:21:60.21:0,60,1864	0/0:8,0:8:24.07:0,24,688	0/0:31,0:31:90.30:0,90,2592	0/0:26,0:26:78.27:0,78,2446	0/0:21,0:21:63.22:0,63,1895	0/0:10,0:10:30.10:0,30,938
chr10	21485199	.	TCACTTAATG	T	1195.15	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.310;DP=697;FS=0.000;HRun=0;HaplotypeScore=189.8703;InbreedingCoeff=0.9049;MQ=92.95;MQ0=0;MQRankSum=-6.729;QD=47.81;ReadPosRankSum=-0.835;VQSLOD=3.0906;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,20:25:48.12:1290,48,0	0/0:10,0:10:30.10:0,30,1435	0/0:32,0:32:66.21:0,66,2485	0/0:31,0:31:69.12:0,69,2655	0/0:22,0:22:66.23:0,66,3064	0/0:26,0:26:78.27:0,78,3731	0/0:24,0:24:66.21:0,66,2916	0/0:25,0:25:72.25:0,72,3287	0/0:21,0:21:57.20:0,57,2578	0/0:33,0:33:93.32:0,93,4254	0/0:25,0:25:72.25:0,72,3289	0/0:23,0:23:63.22:0,63,2736	0/0:27,0:27:78.25:0,78,3434	0/0:35,0:35:99:0,99,4543	0/0:25,0:25:72.25:0,72,3273	0/0:25,0:25:75.24:0,75,3399	0/0:27,0:27:72.21:0,72,3028	0/0:24,0:24:60.21:0,60,2661	0/0:19,0:19:54.17:0,54,2463	0/0:29,0:29:81.28:0,81,3760	0/0:27,0:27:78.27:0,78,3693	0/0:20,0:20:60.21:0,60,2871	0/0:23,0:23:63.20:0,63,2885	0/0:27,0:27:75.26:0,75,3427	0/0:21,0:21:63.22:0,63,2825	0/0:40,0:40:99:0,117,5377	0/0:28,0:28:81.28:0,81,3760	0/0:3,0:3:6.02:0,6,287
chr10	21486367	.	C	CAAA	6087.75	PASS	AB=1.000;AC=47;AF=0.839;AN=56;BaseQRankSum=0.234;DP=550;FS=10.320;HRun=21;HaplotypeScore=142.7554;InbreedingCoeff=0.4761;MQ=64.95;MQ0=7;MQRankSum=-3.381;QD=12.93;ReadPosRankSum=-2.096;VQSLOD=0.1154;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:33,0:33:58.64:640,59,0	1/1:4,0:4:6.02:77,6,0	0/0:35,0:13:5.31:0,5,40	0/0:26,0:15:13.04:0,13,80	0/1:16,0:21:7.22:7,0,52	1/1:5,12:18:3.01:45,3,0	0/1:15,0:15:0.39:117,0,0	1/1:28,1:29:51.71:579,52,0	1/1:12,0:12:10.58:127,11,0	1/1:32,0:32:58.99:676,59,0	1/1:22,0:22:41.43:411,41,0	1/1:13,0:13:19.16:167,19,0	1/1:15,0:15:22.57:265,23,0	1/1:12,0:12:22.33:191,22,0	0/1:14,0:16:8.29:34,0,8	1/1:18,0:18:33.10:404,33,0	1/1:25,0:24:30:324,30,0	1/1:12,9:22:9.76:123,10,0	1/1:13,0:13:20.28:240,20,0	1/1:20,0:20:38.50:405,38,0	1/1:6,0:5:7.32:55,7,0	0/0:13,0:13:5.32:0,5,53	1/1:7,0:24:6.02:63,6,0	1/1:12,0:12:18.06:240,18,0	1/1:19,0:19:29.98:332,30,0	1/1:11,8:23:34.17:337,34,0	1/1:10,18:30:11.67:177,12,0	1/1:15,1:16:6.29:54,6,0
chr10	21487916	.	ATCCC	A	684.80	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.222;DP=652;FS=50.306;HRun=0;HaplotypeScore=187.4793;InbreedingCoeff=0.9876;MQ=85.50;MQ0=0;MQRankSum=-7.363;QD=27.39;ReadPosRankSum=0.543;VQSLOD=1.6922;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,120,3105	0/0:9,0:9:21.07:0,21,581	0/0:21,0:21:63.22:0,63,1701	0/0:21,0:21:63.21:0,63,1572	1/1:1,11:12:21.07:282,21,0	0/0:24,0:24:72.23:0,72,1865	0/0:23,0:23:66.23:0,66,1717	0/0:43,0:43:99:0,129,3427	0/0:24,0:24:72.25:0,72,1874	0/0:28,0:28:84.29:0,84,2247	0/0:15,0:15:42.14:0,42,1149	0/0:30,0:30:87.30:0,87,2397	0/0:27,0:27:81.28:0,81,2190	0/0:23,0:23:66.23:0,66,1827	0/0:28,0:28:81.26:0,81,2150	0/0:24,0:24:69.24:0,69,1860	0/0:29,0:29:87.30:0,87,2349	0/0:28,0:30:87.02:0,87,2204	0/0:22,0:22:66.23:0,66,1814	0/0:16,0:16:48.16:0,48,1310	0/0:25,0:25:72.25:0,72,1913	1/1:0,13:13:39.13:524,39,0	0/0:17,0:17:51.18:0,51,1370	0/0:35,0:35:99:0,105,2802	0/0:13,0:13:36.12:0,36,997	0/0:28,0:28:84.08:0,84,2289	0/0:27,0:26:75.26:0,75,1977	0/0:5,0:5:15.01:0,15,344
chr10	21487921	.	AAG	A	392.96	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=2.961;DP=663;FS=31.206;HRun=0;HaplotypeScore=164.6326;InbreedingCoeff=0.8009;MQ=87.67;MQ0=0;MQRankSum=-1.495;QD=8.19;ReadPosRankSum=-3.915;VQSLOD=1.4288;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:76.32:0,76,294	0/0:9,0:9:17.22:0,17,72	0/0:24,0:24:49.72:0,50,319	0/1:22,0:22:0.80:1,0,187	1/1:2,11:13:19.22:180,19,0	0/0:21,0:21:50.44:0,50,197	0/0:25,0:25:48.06:0,48,174	0/0:39,0:39:35.88:0,36,248	0/0:23,0:23:52.17:0,52,171	0/0:30,0:30:35.37:0,35,223	0/0:17,0:17:34.09:0,34,111	0/0:28,0:28:64.03:0,64,210	0/0:24,0:24:56.91:0,57,186	0/0:24,0:24:50.42:0,50,179	0/0:28,0:28:59.91:0,60,211	0/0:26,0:26:54.54:0,55,178	0/0:31,0:31:70.02:0,70,260	0/0:31,0:31:14.17:0,14,186	0/0:24,0:24:7.03:0,7,105	0/0:17,0:17:37.64:0,38,149	0/0:27,0:27:56.91:0,57,186	1/1:0,13:13:38.39:332,38,0	0/0:19,0:19:42.05:0,42,187	0/0:34,0:34:69.40:0,69,280	0/0:13,0:13:26.09:0,26,85	0/0:29,0:29:65.32:0,65,250	0/0:27,0:26:40.88:0,41,202	0/0:4,0:4:9.49:0,9,31
chr10	21489632	.	GA	G	1273.22	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.721;DP=677;FS=4.705;HRun=5;HaplotypeScore=63.1967;InbreedingCoeff=0.9842;MQ=88.72;MQ0=0;MQRankSum=-0.152;QD=24.97;ReadPosRankSum=1.363;VQSLOD=2.9318;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,114,1514	0/0:12,0:12:36.12:0,36,492	0/0:26,0:26:64.49:0,64,899	0/0:23,0:23:38.62:0,39,689	1/1:3,31:34:84.24:952,84,0	0/0:28,0:28:81.25:0,81,1081	0/0:19,0:19:54.17:0,54,722	0/0:31,0:31:84.27:0,84,1123	0/0:19,0:19:54.17:0,54,722	0/0:32,0:32:93.30:0,93,1259	0/0:29,0:29:81.27:0,81,1104	0/0:34,0:34:99:0,102,1376	0/0:26,0:26:78.26:0,78,1067	0/0:24,0:24:69.23:0,69,938	0/0:28,0:28:81.26:0,81,1094	0/0:21,0:21:54.17:0,54,723	0/0:17,0:17:51.17:0,51,698	0/0:18,0:18:51.15:0,51,680	0/0:18,0:18:45.14:0,45,597	0/0:25,0:25:75.21:0,75,1006	0/0:38,0:38:99:0,111,1517	1/1:2,15:17:39.11:442,39,0	0/0:27,0:27:75.23:0,75,991	0/0:15,0:15:45.15:0,45,616	0/0:27,0:27:72.21:0,72,942	0/0:25,0:25:75.24:0,75,1010	0/0:21,0:21:57.19:0,57,780	0/0:4,0:4:12.04:0,12,164
chr10	21490822	.	A	AC	26144.95	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-10.521;DP=713;FS=17.708;HRun=2;HaplotypeScore=63.1709;InbreedingCoeff=0.9936;MQ=84.01;MQ0=0;MQRankSum=-8.289;QD=40.53;ReadPosRankSum=4.428;VQSLOD=2.9587;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,37:36:90.30:1349,90,0	1/1:0,12:12:36.12:539,36,0	0/0:22,0:22:66.20:0,66,821	0/0:22,0:22:54.15:0,54,677	1/1:0,36:36:93.31:1392,93,0	1/1:0,23:23:63.21:944,63,0	1/1:0,30:30:81.27:1214,81,0	1/1:2,26:28:75.23:1081,75,0	1/1:0,16:16:45.15:674,45,0	1/1:1,26:27:78.21:1119,78,0	1/1:0,27:27:75.25:1121,75,0	1/1:0,26:26:69.23:1034,69,0	1/1:0,11:11:24.08:360,24,0	1/1:1,35:37:99:1566,105,0	0/0:24,0:24:72.22:0,72,910	1/1:0,23:23:63.21:944,63,0	1/1:1,46:47:99:1888,126,0	1/1:1,17:18:51.17:764,51,0	1/1:1,24:25:75.25:1118,75,0	1/1:1,22:23:60.16:872,60,0	1/1:1,26:26:72.24:1079,72,0	1/1:0,36:36:99:1529,102,0	1/1:0,23:23:66.22:988,66,0	1/1:0,26:26:69.23:1034,69,0	1/1:0,28:28:69.23:1032,69,0	1/1:0,26:26:78.26:1167,78,0	1/1:3,25:28:75.25:1111,75,0	1/1:0,5:5:15.05:225,15,0
chr10	21494144	.	T	TG	20761.53	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-16.803;DP=816;FS=2.980;HRun=1;HaplotypeScore=72.2138;InbreedingCoeff=0.9957;MQ=76.01;MQ0=0;MQRankSum=-3.975;QD=41.03;ReadPosRankSum=3.378;VQSLOD=5.5724;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,50:51:99:2152,144,0	0/0:13,0:13:39.13:0,39,506	0/0:14,0:14:30.81:0,31,383	0/0:30,0:30:78.25:0,78,1004	1/1:1,39:40:99:1659,111,0	1/1:0,19:19:57.19:844,57,0	1/1:0,28:28:66.22:989,66,0	1/1:1,33:33:96.32:1434,96,0	1/1:0,26:26:75.25:1124,75,0	0/0:38,0:39:99:0,114,1452	0/0:25,0:25:72.23:0,72,925	1/1:0,34:34:99:1528,102,0	1/1:1,28:29:75.25:1124,75,0	1/1:1,30:31:72.24:1079,72,0	0/0:36,0:36:99:0,108,1394	0/0:34,0:34:99:0,99,1285	0/0:31,0:31:84.27:0,84,1089	1/1:2,28:30:87.26:1273,87,0	0/0:24,0:24:69.22:0,69,896	0/0:35,0:35:99:0,105,1362	0/0:29,0:29:84.27:0,84,1090	1/1:0,29:29:75.25:1124,75,0	1/1:0,31:31:84.12:1258,84,0	1/1:1,22:23:69.23:1034,69,0	1/1:1,21:22:60.12:871,60,0	1/1:3,28:31:12.36:1157,12,0	1/1:0,39:39:99:1708,114,0	1/1:0,9:9:27.09:403,27,0
chr10	21495105	.	TA	T	8346.07	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=5.158;DP=567;FS=11.829;HRun=9;HaplotypeScore=77.0475;InbreedingCoeff=0.9202;MQ=68.94;MQ0=1;MQRankSum=-3.742;QD=16.02;ReadPosRankSum=2.720;VQSLOD=4.0221;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,33:34:96.05:879,96,0	1/1:0,0:8:13.47:39,13,0	0/0:14,0:14:18.12:0,18,300	0/0:12,0:12:14.40:0,14,181	1/1:1,0:28:46.85:137,47,0	1/1:3,21:24:54.02:494,54,0	1/1:3,19:22:57.02:522,57,0	1/1:3,23:26:69.03:631,69,0	1/1:1,18:19:48.02:439,48,0	1/1:2,0:22:39.95:117,40,0	1/1:1,0:18:32.59:96,33,0	1/1:3,17:20:45.02:412,45,0	1/1:2,20:22:54.03:494,54,0	1/1:1,10:11:30.02:275,30,0	0/0:20,0:20:51.15:0,51,588	1/1:2,0:16:28.52:84,29,0	1/1:4,0:18:26.48:78,26,0	1/1:5,14:19:42.02:384,42,0	1/1:2,0:28:47.99:141,48,0	1/1:0,0:15:22.40:66,22,0	1/1:1,0:17:26.48:78,26,0	1/1:1,0:20:34.63:102,35,0	1/1:3,17:20:39.02:357,39,0	1/1:3,26:29:75.04:686,75,0	1/1:2,27:29:66.03:604,66,0	1/1:3,24:27:72.04:659,72,0	1/1:5,21:26:58.32:546,58,0	1/1:1,1:2:2.83:27,3,0
chr10	21495362	.	CAA	C	10775.82	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-13.571;DP=656;FS=2.164;HRun=9;HaplotypeScore=103.1217;InbreedingCoeff=0.9980;MQ=77.99;MQ0=5;MQRankSum=-1.627;QD=28.81;ReadPosRankSum=2.561;VQSLOD=4.9960;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,39:40:99:1294,111,0	0/0:1,0:11:24.95:0,25,88	0/0:22,0:22:42.13:0,42,622	0/0:13,0:13:33.04:0,33,426	0/0:0,0:22:54.90:0,55,193	1/1:3,23:25:63.18:734,63,0	1/1:1,21:22:54.15:629,54,0	1/1:4,19:23:40.14:578,40,0	1/1:2,16:18:48.13:559,48,0	0/0:3,0:28:58.73:0,59,214	0/0:4,0:24:47.93:0,48,207	1/1:3,21:24:54.16:629,54,0	1/1:2,25:26:60.18:699,60,0	1/1:4,12:16:33.09:385,33,0	0/0:26,0:26:68.72:0,69,1089	0/0:1,0:22:44.71:0,45,158	0/0:6,0:39:70.34:0,70,257	1/1:3,25:27:72.21:839,72,0	0/0:3,0:26:61.18:0,61,241	0/0:2,1:23:18.47:0,18,152	0/0:0,0:11:27.45:0,27,97	0/0:0,0:15:37.31:0,37,131	1/1:0,21:20:57.15:664,57,0	1/1:3,19:22:54.15:629,54,0	1/1:1,29:29:81.24:944,81,0	1/1:4,29:34:80.96:1005,81,0	1/1:4,29:33:81.22:944,81,0	1/1:0,10:10:21.06:245,21,0
chr10	21497000	.	C	CATAATCGGACCCCACCGTT	5638.79	PASS	AB=0.783;AC=54;AF=0.964;AN=56;BaseQRankSum=1.866;DP=289;FS=28.271;HRun=0;HaplotypeScore=397.8875;InbreedingCoeff=-0.0659;MQ=69.18;MQ0=0;MQRankSum=-2.682;QD=19.51;ReadPosRankSum=1.240;VQSLOD=2.0709;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:8,0:8:11.58:139,12,0	1/1:5,0:5:11.64:148,12,0	0/1:8,0:9:24.67:64,0,25	0/1:4,1:8:22.44:622,0,22	1/1:19,0:20:36.70:343,37,0	1/1:15,0:15:25.85:239,26,0	1/1:9,0:10:11.10:60,11,0	1/1:16,0:17:36.92:206,37,0	1/1:9,0:10:11.36:97,11,0	1/1:12,0:13:23.77:214,24,0	1/1:9,0:9:11.86:119,12,0	1/1:7,0:7:11.71:193,12,0	1/1:14,0:14:23.98:409,24,0	1/1:10,0:10:15.01:157,15,0	1/1:12,0:12:23.79:300,24,0	1/1:16,0:16:32.31:359,32,0	1/1:9,0:10:5.95:62,6,0	1/1:4,0:4:5.82:36,6,0	1/1:6,0:6:11.57:90,12,0	1/1:11,0:12:17.09:204,17,0	1/1:3,0:3:5.05:62,5,0	1/1:14,0:15:32.45:295,32,0	1/1:8,0:8:8.89:96,9,0	1/1:6,0:6:9.23:47,9,0	1/1:5,0:5:11.69:157,12,0	1/1:13,0:13:26.69:335,27,0	1/1:18,0:18:34.83:483,35,0	1/1:6,0:6:17.05:105,17,0
chr10	21497001	.	A	AATTAGAAGTTTTGTTCAACAC	3169.28	PASS	AB=0.800;AC=45;AF=0.978;AN=46;BaseQRankSum=-2.176;DP=64;FS=3.054;HRun=0;HaplotypeScore=33.5304;InbreedingCoeff=-0.1620;MQ=116.55;MQ0=0;MQRankSum=-1.570;QD=54.64;ReadPosRankSum=0.138;VQSLOD=2.0954;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	1/1:1,0:1:3.01:150,3,0	1/1:3,1:8:18.03:761,18,0	0/1:3,0:4:24.93:92,0,25	1/1:6,0:6:18.06:431,18,0	1/1:3,0:3:3.01:49,3,0	1/1:3,0:3:3.01:86,3,0	1/1:3,0:3:6.02:137,6,0	1/1:2,0:2:2.98:21,3,0	1/1:2,0:2:6.01:114,6,0	1/1:1,0:1:3.01:119,3,0	1/1:1,0:1:2.97:20,3,0	1/1:1,0:1:2.98:21,3,0	1/1:2,0:2:3.01:119,3,0	./.	1/1:3,0:3:6.02:175,6,0	./.	./.	1/1:3,0:3:8.99:98,9,0	1/1:3,0:3:3.01:86,3,0	1/1:1,0:1:3.01:48,3,0	1/1:2,0:2:6.02:162,6,0	1/1:2,0:2:5.94:41,6,0	./.	1/1:1,0:1:3.01:112,3,0	1/1:2,0:2:3.01:71,3,0	1/1:1,0:1:3.01:48,3,0	1/1:3,0:3:9.03:295,9,0
chr10	21498153	.	AT	A	1008.24	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.247;DP=600;FS=14.810;HRun=8;HaplotypeScore=55.9598;InbreedingCoeff=0.9946;MQ=78.08;MQ0=0;MQRankSum=-4.254;QD=22.91;ReadPosRankSum=1.581;VQSLOD=2.8991;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:81.24:0,81,970	0/0:14,0:14:36.11:0,36,435	0/0:12,0:12:18.06:0,18,217	0/0:16,0:16:26.57:0,27,333	1/1:3,21:24:60.09:579,60,0	0/0:33,0:33:96.28:0,96,1150	0/0:18,0:18:54.08:0,54,612	0/0:36,0:37:99:0,99,1142	0/0:20,0:20:45.12:0,45,531	0/0:22,0:22:57.17:0,57,688	0/0:24,0:24:66.20:0,66,789	0/0:14,0:14:39.12:0,39,471	0/0:21,0:21:60.18:0,60,725	0/0:21,0:21:44.86:0,45,673	0/0:26,0:26:75.23:0,75,906	0/0:22,0:22:54.17:0,54,652	0/0:25,0:25:69.20:0,69,824	0/0:11,0:11:30.09:0,30,362	0/0:14,0:14:36.09:0,36,414	0/0:28,0:28:78.24:0,78,942	0/0:25,0:25:72.21:0,72,857	1/1:0,20:20:57.09:550,57,0	0/0:19,0:19:51.16:0,51,616	0/0:20,0:20:54.17:0,54,652	0/0:26,0:26:75.23:0,75,906	0/0:20,0:20:54.17:0,54,652	0/0:23,0:22:66.17:0,66,773	0/0:10,0:10:30.09:0,30,362
chr10	21499635	.	CAAA	C	8115.42	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=10.954;DP=586;FS=3.801;HRun=12;HaplotypeScore=125.8041;InbreedingCoeff=0.9778;MQ=76.31;MQ0=7;MQRankSum=-2.643;QD=27.14;ReadPosRankSum=6.677;VQSLOD=3.4401;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:0,11:11:30.08:376,30,0	0/0:4,0:4:9.03:0,9,177	0/0:54,1:28:31:0,31,698	0/0:66,0:31:40.20:0,40,557	1/1:3,33:37:87.17:1080,87,0	1/1:3,15:18:42.12:530,42,0	1/1:1,6:7:12.02:152,12,0	1/1:5,0:21:41.63:254,42,0	1/1:4,16:20:38.93:486,39,0	0/0:19,0:19:48.15:0,48,913	0/0:28,0:28:75.25:0,75,1441	1/1:1,15:16:45.14:568,45,0	1/1:6,16:22:42.08:530,42,0	1/1:0,12:12:24.08:303,24,0	0/0:17,0:20:54.18:0,54,1019	0/0:17,0:17:45.12:0,45,849	0/0:17,0:21:60.15:0,60,1021	1/1:3,17:20:48.12:606,48,0	0/0:8,0:9:27.09:0,27,499	0/0:25,0:30:72.22:0,72,1314	0/0:9,0:11:30.06:0,30,508	1/1:3,17:20:51.06:625,51,0	1/1:4,18:23:46.52:597,47,0	1/1:1,8:9:24.07:303,24,0	1/1:4,16:20:42.09:516,42,0	1/1:3,15:19:26.54:545,27,0	1/1:1,18:19:42.12:531,42,0	1/1:0,3:5:9.03:114,9,0
chr10	21500700	.	TTTTTCTTTTC	T	4281.18	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=-3.132;DP=437;FS=8.410;HRun=0;HaplotypeScore=143.1748;InbreedingCoeff=0.2094;MQ=64.61;MQ0=4;MQRankSum=-1.571;QD=18.06;ReadPosRankSum=2.206;VQSLOD=3.4132;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:8,0:7:0:0,0,0	0/0:8,0:8:18.06:0,18,596	0/0:15,0:10:12.44:0,12,361	0/1:14,0:12:15.32:15,0,410	0/1:10,0:10:49.68:63,0,50	0/1:15,0:15:99:308,0,107	0/0:16,0:16:3.01:0,3,85	1/1:25,0:25:54.18:1110,54,0	1/1:8,0:7:17.76:232,18,0	0/0:22,0:21:34.91:0,35,1432	0/0:12,0:13:36.12:0,36,1053	1/1:12,0:11:14.75:156,15,0	1/1:4,12:16:6.95:212,7,0	0/1:10,0:9:86.69:217,0,87	0/0:41,0:41:99:0,108,3573	0/0:17,0:15:33.11:0,33,942	0/0:16,0:15:13.52:0,14,974	1/1:14,0:11:25.67:347,26,0	0/0:20,0:19:4.75:0,5,768	0/0:18,0:17:42.10:0,42,1272	0/1:11,0:11:5.58:6,0,423	0/0:14,0:14:19.85:0,20,175	0/1:16,0:14:2.40:2,0,111	1/1:10,0:8:13.64:117,14,0	0/1:18,0:16:99:192,0,187	0/1:21,0:21:99:482,0,254	0/1:23,0:20:93.55:765,0,94	0/1:6,0:5:54.07:54,0,100
chr10	21500701	.	TTTTCTTTTCTTTTC	T	3606.71	PASS	AB=1.000;AC=20;AF=0.357;AN=56;BaseQRankSum=-4.688;DP=440;FS=1.058;HRun=0;HaplotypeScore=176.2750;InbreedingCoeff=-0.0148;MQ=62.00;MQ0=4;MQRankSum=-3.785;QD=15.96;ReadPosRankSum=0.645;VQSLOD=2.7422;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:2,5:6:2.97:20,3,0	0/0:7,0:7:18.06:0,18,755	0/0:14,0:9:20.44:0,20,377	0/1:13,0:11:16.56:17,0,406	0/1:10,0:10:44.76:110,0,45	0/1:15,0:15:99:286,0,238	0/0:16,0:16:3.01:0,3,103	1/1:25,0:25:54.18:1110,54,0	0/1:7,0:6:31.12:132,0,31	0/0:22,0:21:51.12:0,51,1734	0/0:13,0:13:36.12:0,36,1294	0/1:13,0:12:1.81:112,0,2	1/1:16,0:16:2.57:70,3,0	0/1:10,0:9:99:204,0,189	0/0:41,0:41:99:0,108,4378	0/0:17,0:15:33.11:0,33,995	0/0:16,0:15:33:0,33,1170	1/1:13,0:10:3.29:271,3,0	0/0:19,0:18:30.04:0,30,850	0/0:20,0:19:45.11:0,45,1520	0/0:11,0:11:14.97:0,15,480	0/1:14,0:14:13.38:13,0,145	0/0:18,0:15:14.58:0,15,337	0/1:10,0:8:52.07:52,0,78	0/1:23,0:21:99:139,0,793	0/1:21,0:21:99:381,0,583	0/1:23,0:20:99:637,0,199	0/1:6,0:5:54.07:54,0,190
chr10	21500705	.	CT	C	3219.84	PASS	AB=0.857;AC=27;AF=0.482;AN=56;BaseQRankSum=4.694;DP=426;FS=25.533;HRun=7;HaplotypeScore=84.9598;InbreedingCoeff=0.6128;MQ=59.51;MQ0=5;MQRankSum=-3.586;QD=14.31;ReadPosRankSum=-0.411;VQSLOD=1.7647;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:6,1:6:0:0,0,0	0/0:7,0:7:14.97:0,15,175	0/0:13,0:8:16.03:0,16,206	0/0:12,0:10:11.85:0,12,243	0/1:10,0:10:13.38:13,0,45	1/1:4,10:14:24.52:299,25,0	0/0:2,0:15:3:0,3,29	1/1:2,0:22:36.66:514,37,0	1/1:1,6:6:18.04:188,18,0	0/0:19,2:20:2.17:0,2,585	0/0:14,0:14:34.35:0,34,430	1/1:3,7:9:13.73:142,14,0	0/1:17,1:16:14.89:34,0,15	1/1:5,6:9:24.04:247,24,0	0/0:42,0:41:99:0,104,1351	0/0:18,0:15:33.11:0,33,451	0/0:16,0:15:28.77:0,29,461	1/1:5,7:10:26.73:250,27,0	0/1:16,2:17:12.83:13,0,381	0/0:19,1:19:17.31:0,17,483	0/0:10,0:10:11.42:0,11,202	0/0:13,0:13:17.49:0,17,160	1/1:5,5:14:11.18:126,11,0	1/1:1,7:6:15.03:154,15,0	1/1:6,16:20:45.02:426,45,0	0/1:5,4:22:26.58:443,0,27	1/1:2,20:19:48.09:485,48,0	1/1:0,5:4:9.02:90,9,0
chr10	21500708	.	T	TC	1548.44	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=5.414;DP=426;FS=37.877;HRun=0;HaplotypeScore=93.3352;InbreedingCoeff=0.7943;MQ=56.09;MQ0=5;MQRankSum=-1.029;QD=9.06;ReadPosRankSum=0.028;VQSLOD=1.7871;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:5:0:0,0,0	0/0:9,0:8:17.66:0,18,174	0/0:12,0:7:11.28:0,11,185	0/0:11,0:9:6.24:0,6,231	0/0:11,1:12:4.32:0,4,249	1/1:14,0:14:14.15:108,14,0	0/0:14,0:14:2.92:0,3,17	1/1:21,0:21:25.55:214,26,0	1/1:7,0:6:17.03:89,17,0	0/0:24,0:23:29.39:0,29,601	0/0:16,1:17:42.93:0,43,466	1/1:10,0:9:7.83:66,8,0	0/0:16,2:16:6.90:0,7,43	1/1:10,1:9:21.76:97,22,0	0/0:40,0:39:99:0,108,1501	0/0:17,0:14:33.11:0,33,451	0/0:16,0:15:37.66:0,38,465	1/1:12,0:10:17.85:120,18,0	0/0:16,0:15:19.37:0,19,406	0/0:20,1:20:39.34:0,39,512	0/0:8,0:8:19.46:0,19,219	0/0:14,0:14:30.97:0,31,385	1/1:15,1:13:13.36:85,13,0	1/1:7,0:5:13.96:69,14,0	1/1:19,5:20:43.59:375,44,0	0/1:23,0:23:22.88:259,0,23	1/1:21,0:18:44.24:235,44,0	1/1:5,0:4:8.39:39,8,0
chr10	21500710	.	CT	C	3900.89	PASS	AB=0.847;AC=34;AF=0.607;AN=56;BaseQRankSum=3.646;DP=421;FS=29.713;HRun=4;HaplotypeScore=84.0373;InbreedingCoeff=0.3320;MQ=56.03;MQ0=6;MQRankSum=-3.154;QD=11.58;ReadPosRankSum=-1.605;VQSLOD=0.3814;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:5:0:0,0,0	0/0:6,3:8:9.07:0,9,147	0/0:12,0:7:12.22:0,12,192	0/0:11,0:9:21.38:0,21,240	1/1:2,9:11:27.06:301,27,0	1/1:4,10:14:12.19:267,12,0	0/0:14,0:14:3.01:0,3,40	1/1:21,0:21:30.11:443,30,0	1/1:1,6:6:15.03:154,15,0	0/1:20,5:24:99:165,0,466	0/1:13,3:16:60.78:61,0,266	0/1:2,7:8:0.03:76,0,0	0/1:18,1:17:33.72:44,0,34	1/1:5,6:9:15.01:146,15,0	0/1:34,6:39:42.89:43,0,1012	0/0:16,1:14:33.10:0,33,411	0/0:15,0:14:17.87:0,18,306	1/1:5,7:10:23.88:216,24,0	0/1:14,2:15:20.96:21,0,340	0/1:16,4:19:52.64:53,0,377	0/1:8,0:8:7.58:8,0,160	1/1:2,10:12:21.06:243,21,0	1/1:10,7:13:9.37:123,9,0	1/1:0,7:5:15.03:154,15,0	1/1:6,18:20:45.02:430,45,0	1/1:16,7:23:8.46:403,8,0	1/1:3,17:17:48.05:460,48,0	1/1:0,5:4:9.02:90,9,0
chr10	21500715	.	C	CT	2512.09	PASS	AB=0.710;AC=14;AF=0.250;AN=56;BaseQRankSum=-8.551;DP=468;FS=0.559;HRun=4;HaplotypeScore=95.1248;InbreedingCoeff=0.2100;MQ=48.54;MQ0=15;MQRankSum=3.357;QD=16.53;ReadPosRankSum=2.215;VQSLOD=2.9972;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,0:5:2.74:12,3,0	0/1:6,4:9:37.34:146,0,37	0/1:11,0:6:7.24:7,0,129	0/0:9,0:7:18.05:0,18,206	0/0:17,0:17:26.13:0,26,210	0/0:15,0:15:31.67:0,32,307	0/0:16,0:15:3.01:0,3,32	0/0:28,0:20:50.10:0,50,488	0/0:11,0:10:15.04:0,15,168	0/1:9,14:22:99:440,0,164	0/1:8,10:19:99:332,0,105	0/0:13,0:11:17.22:0,17,161	0/0:20,0:17:16.97:0,17,127	0/0:10,0:8:18.04:0,18,188	0/0:39,0:38:91.54:0,92,986	1/1:5,13:15:0.59:425,1,0	1/1:3,13:13:4.92:352,5,0	0/0:12,0:10:18.51:0,19,206	0/1:9,9:16:71.65:337,0,72	0/1:9,14:21:66.93:454,0,67	1/1:2,6:7:2.68:155,3,0	0/0:10,0:10:14.99:0,15,131	0/0:20,0:15:17.96:0,18,194	0/0:10,0:7:15.04:0,15,168	0/0:36,0:30:37.13:0,37,318	0/0:24,1:25:15.52:0,16,528	0/0:20,0:16:45.03:0,45,470	0/0:5,0:4:9.02:0,9,93
chr10	21500835	.	C	CT	228.33	PASS	AB=0.895;AC=12;AF=0.250;AN=48;BaseQRankSum=0.526;DP=192;FS=6.709;HRun=3;HaplotypeScore=53.4926;InbreedingCoeff=-0.0459;MQ=29.46;MQ0=12;MQRankSum=-1.293;QD=3.57;ReadPosRankSum=-1.556;VQSLOD=-0.6290;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:3,0:3:5.05:0,5,48	0/0:1,0:1:2.88:0,3,15	./.	./.	0/0:14,0:13:1.30:0,1,217	0/1:5,2:6:24.88:81,0,25	1/1:4,0:2:0.47:1,0,0	./.	0/1:6,1:5:33.51:34,0,72	0/1:6,0:5:8.61:39,0,9	0/0:5,0:5:5.72:0,6,28	0/0:3,0:2:0.45:0,0,5	0/1:12,1:10:46.92:47,0,112	0/0:5,0:3:0.96:0,1,31	0/0:18,0:17:30.10:0,30,403	0/0:7,0:4:5.82:0,6,35	0/1:7,1:7:30.01:30,0,107	1/1:6,0:4:2.74:45,3,0	./.	0/1:8,1:7:30.11:30,0,125	1/1:3,1:2:3.01:45,3,0	0/0:13,0:13:21.06:0,21,278	0/0:7,0:7:5.75:0,6,50	0/0:6,0:3:3.01:0,3,41	0/0:11,0:8:3.48:0,3,42	0/0:11,0:8:19.78:0,20,252	0/0:9,0:3:4.66:0,5,76	0/0:4,0:3:3.01:0,3,42
chr10	21501440	.	T	TA	12234.32	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-6.254;DP=466;FS=1.564;HRun=8;HaplotypeScore=48.0251;InbreedingCoeff=0.9050;MQ=74.47;MQ0=0;MQRankSum=-3.144;QD=28.12;ReadPosRankSum=2.862;VQSLOD=5.3041;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,14:19:42.12:485,42,0	1/1:2,10:12:27.08:312,27,0	0/0:11,0:11:30:0,30,269	0/0:4,0:4:4.43:0,4,74	1/1:4,18:22:45.13:519,45,0	1/1:2,13:15:39.12:450,39,0	1/1:1,11:12:27.08:312,27,0	1/1:8,22:30:81.17:918,81,0	1/1:1,17:18:51.15:589,51,0	1/1:3,17:20:51.14:578,51,0	1/1:2,30:32:81.16:905,81,0	1/1:1,13:14:36.11:415,36,0	1/1:3,12:15:33.10:381,33,0	1/1:1,14:15:36.11:415,36,0	0/0:16,0:16:42.01:0,42,384	1/1:0,19:19:54.16:623,54,0	1/1:1,6:7:18.05:208,18,0	1/1:3,13:17:47.64:507,48,0	1/1:0,14:14:42.12:485,42,0	1/1:4,21:25:60.18:693,60,0	1/1:1,10:11:27.08:312,27,0	1/1:3,13:16:39.07:435,39,0	1/1:2,10:12:27.08:312,27,0	1/1:1,10:11:27.08:312,27,0	1/1:3,19:22:51.15:589,51,0	1/1:3,18:21:48.13:540,48,0	1/1:3,20:23:54.16:623,54,0	1/1:3,10:13:5.63:319,6,0
chr10	21501497	.	G	GA	1077.56	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-8.429;DP=512;FS=3.308;HRun=7;HaplotypeScore=68.7161;InbreedingCoeff=0.9746;MQ=72.50;MQ0=1;MQRankSum=-0.436;QD=28.36;ReadPosRankSum=-5.487;VQSLOD=1.7204;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:57.09:0,57,550	0/0:13,0:13:39.05:0,39,371	0/0:8,0:8:18.01:0,18,174	0/0:11,0:11:22.56:0,23,198	0/0:24,0:24:69.09:0,69,660	0/0:20,0:20:57.09:0,57,551	0/0:10,0:10:27.03:0,27,255	1/1:5,33:38:99:1172,99,0	0/0:9,0:9:21.03:0,21,203	0/0:25,0:25:69.10:0,69,663	0/0:42,0:43:99:0,119,1135	0/0:11,0:11:33.05:0,33,319	0/0:19,0:19:51.07:0,51,493	0/0:15,0:15:42.07:0,42,405	0/0:15,0:15:45.07:0,45,435	0/0:15,0:15:42.07:0,42,406	0/0:16,0:16:42.06:0,42,405	0/0:16,0:15:33.05:0,33,319	0/0:15,0:15:36.05:0,36,348	0/0:40,0:40:99:0,111,1072	0/0:10,0:10:21.02:0,21,203	0/0:9,0:9:21.03:0,21,203	0/0:16,0:16:42.05:0,42,400	0/0:10,0:10:27.04:0,27,261	0/0:24,0:24:63.08:0,63,604	0/0:28,0:27:72.11:0,72,695	0/0:18,0:18:45.07:0,45,434	0/0:14,0:14:42.07:0,42,406
chr10	21502405	.	CTGTT	C	9913.82	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-5.613;DP=749;FS=1.393;HRun=0;HaplotypeScore=158.3886;InbreedingCoeff=0.9996;MQ=81.81;MQ0=0;MQRankSum=-7.538;QD=52.18;ReadPosRankSum=3.245;VQSLOD=5.8673;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:72.23:0,72,1878	1/1:0,14:14:36.12:697,36,0	0/0:30,0:30:81.21:0,81,1924	0/0:16,0:16:45.13:0,45,1112	0/0:20,0:20:60.17:0,60,1531	0/0:37,0:37:99:0,108,2898	0/0:25,0:25:75.26:0,75,2047	0/0:44,0:44:99:0,126,3381	0/0:33,0:33:96.33:0,96,2594	1/1:3,26:29:84.28:1598,84,0	1/1:4,24:28:72.25:1387,72,0	0/0:26,0:26:75.26:0,75,2050	0/0:33,0:33:99:0,99,2649	0/0:22,0:22:66.23:0,66,1798	0/0:41,0:41:99:0,120,3171	1/1:5,23:28:72.25:1387,72,0	1/1:3,19:22:60.21:1163,60,0	0/0:16,0:15:48.16:0,48,1311	1/1:0,21:21:63.22:1219,63,0	1/1:2,23:25:69.20:1300,69,0	1/1:0,23:23:60.21:1163,60,0	0/0:26,0:26:78.27:0,78,2078	0/0:21,0:21:54.19:0,54,1478	0/0:8,0:8:24.08:0,24,658	0/0:41,0:41:99:0,123,3228	0/0:38,1:39:53.21:0,53,2865	0/0:36,0:36:99:0,99,2622	0/0:20,0:20:60.21:0,60,1643
chr10	21502488	.	G	GA	5713.10	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-11.070;DP=750;FS=3.255;HRun=8;HaplotypeScore=81.6130;InbreedingCoeff=0.9982;MQ=79.19;MQ0=0;MQRankSum=-1.569;QD=29.00;ReadPosRankSum=0.301;VQSLOD=4.9483;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:78.04:0,78,714	1/1:1,7:8:21.06:242,21,0	0/0:28,0:28:55.24:0,55,495	0/0:15,0:15:20.15:0,20,190	0/0:31,0:31:84.04:0,84,769	0/0:35,0:35:96.03:0,96,873	0/0:15,0:15:33.01:0,33,302	0/0:44,0:45:90.33:0,90,965	0/0:38,0:38:99:0,105,956	1/1:4,23:27:75.22:859,75,0	1/1:2,31:33:84.22:955,84,0	0/0:30,0:30:81.03:0,81,736	0/0:29,0:29:81.04:0,81,741	0/0:32,0:32:81.03:0,81,741	0/0:31,0:31:84.04:0,84,769	1/1:2,31:33:90.27:1039,90,0	1/1:4,19:23:54.16:623,54,0	0/0:14,0:14:36.02:0,36,329	1/1:5,17:22:57.15:646,57,0	1/1:2,34:36:90.27:1038,90,0	1/1:5,10:15:27.08:311,27,0	0/0:29,0:29:78.04:0,78,714	0/0:29,1:30:46.35:0,46,674	0/0:17,0:17:44.98:0,45,403	0/0:22,0:22:50.99:0,51,467	0/0:30,0:30:72.03:0,72,659	0/0:40,0:41:99:0,113,1017	0/0:13,0:13:30.01:0,30,275
chr10	21507311	.	TCTCTCTCC	T	922.72	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=-0.484;DP=676;FS=21.178;HRun=0;HaplotypeScore=255.0195;InbreedingCoeff=0.0333;MQ=48.93;MQ0=24;MQRankSum=-1.276;QD=4.31;ReadPosRankSum=-7.117;VQSLOD=-0.2965;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:15:10.04:0,10,122	0/0:14,0:13:22.66:0,23,706	0/1:16,0:9:4.25:4,0,245	0/0:18,0:10:14.26:0,14,176	0/0:25,0:23:43.65:0,44,1226	0/1:24,0:23:14.83:15,0,485	0/0:24,0:23:8.51:0,9,129	1/1:10,22:30:65.24:886,65,0	0/1:27,0:27:24.47:24,0,338	0/0:30,0:29:46.87:0,47,1584	0/0:18,0:18:5.97:0,6,596	0/0:29,0:27:2.07:0,2,621	0/1:36,0:33:38.19:38,0,676	0/0:26,0:26:26.96:0,27,519	0/0:42,0:41:61.72:0,62,1089	0/0:29,0:25:29.39:0,29,1213	0/0:20,0:20:39.71:0,40,1332	0/1:13,0:11:12.50:12,0,109	0/0:24,0:22:53.12:0,53,1137	0/0:17,0:17:17.96:0,18,585	0/0:27,0:25:25.10:0,25,699	0/0:25,0:24:20.41:0,20,1177	0/1:36,0:34:21.89:22,0,312	0/0:16,0:14:6:0,6,75	0/0:15,0:14:12.87:0,13,204	0/1:30,0:30:61.25:61,0,1244	0/0:28,0:28:39.98:0,40,908	0/0:19,0:15:10.11:0,10,301
chr10	21507319	.	C	CCT	1624.94	PASS	AB=0.979;AC=32;AF=0.593;AN=54;BaseQRankSum=6.952;DP=649;FS=4.583;HRun=0;HaplotypeScore=202.1523;InbreedingCoeff=-0.1544;MQ=45.44;MQ0=28;MQRankSum=-2.864;QD=2.88;ReadPosRankSum=-1.370;VQSLOD=2.4824;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:13:2.94:18,3,0	0/1:10,6:16:8.16:8,0,123	./.	0/0:13,0:6:2.92:0,3,17	0/1:27,0:25:33.53:34,0,234	1/1:23,0:22:14.94:130,15,0	0/1:23,0:21:0.20:0,0,0	0/0:24,0:22:14.22:0,14,65	1/1:26,0:27:12.88:99,13,0	0/1:33,0:32:81.68:82,0,290	0/1:19,0:19:33.12:33,0,101	1/1:26,0:26:26.01:187,26,0	0/1:29,0:27:7.12:92,0,7	1/1:26,0:26:6.68:105,7,0	0/1:42,0:41:66.07:181,0,66	0/1:30,0:26:99:106,0,228	0/1:17,0:17:99:103,0,143	0/0:10,0:8:2.91:0,3,17	0/1:26,0:21:76.30:76,0,171	0/1:17,0:17:32.50:33,0,76	0/0:24,0:23:12.55:0,13,182	0/1:26,0:25:68.87:69,0,188	1/1:35,0:33:5.39:61,5,0	1/1:16,0:13:2.61:17,3,0	1/1:13,0:13:4.45:43,4,0	0/1:30,0:30:44.96:84,0,45	1/1:25,0:25:24.69:191,25,0	0/1:17,0:13:11.02:31,0,11
chr10	21507325	.	TCTCACACACACA	T	5325.46	PASS	AB=0.834;AC=15;AF=0.278;AN=54;BaseQRankSum=1.341;DP=624;FS=40.481;HRun=0;HaplotypeScore=259.0227;InbreedingCoeff=-0.3190;MQ=43.80;MQ0=22;MQRankSum=-3.517;QD=15.09;ReadPosRankSum=-4.669;VQSLOD=1.9687;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:11,1:11:3.04:331,0,3	0/0:17,0:16:18.30:0,18,625	./.	0/0:3,0:1:2.98:0,3,21	0/0:28,0:26:30.11:0,30,1370	0/1:14,9:22:99:127,0,147	0/1:15,6:19:18.03:373,0,18	0/1:25,0:24:11.69:63,0,12	0/1:19,4:26:99:629,0,100	0/0:33,0:32:64.32:0,64,2333	0/0:20,0:20:26.91:0,27,900	0/1:26,5:28:99:725,0,152	0/1:20,9:26:99:900,0,186	0/1:21,5:26:99:461,0,201	0/1:27,0:45:19.79:20,0,325	0/0:32,0:28:65.64:0,66,1976	0/0:17,0:17:45.10:0,45,1569	0/1:9,0:7:11.01:118,0,11	0/0:23,0:19:57.05:0,57,1442	0/0:17,0:17:21.03:0,21,371	0/0:26,0:25:26.29:0,26,889	0/0:26,0:25:44.89:0,45,1227	0/1:26,6:30:87.86:182,0,88	0/1:15,0:12:11.65:69,0,12	0/1:12,2:13:63.67:167,0,64	0/1:18,12:29:99:674,0,521	0/0:18,1:21:38.75:0,39,374	0/1:8,4:12:62.28:488,0,62
chr10	21507327	.	T	TCA	2008.68	PASS	AB=0.930;AC=21;AF=0.404;AN=52;BaseQRankSum=-6.321;DP=627;FS=2.159;HRun=0;HaplotypeScore=214.7254;InbreedingCoeff=-0.1219;MQ=43.74;MQ0=21;MQRankSum=2.505;QD=4.48;ReadPosRankSum=1.067;VQSLOD=3.2009;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:12:2.65:0,3,21	0/1:16,1:17:34.54:35,0,51	./.	./.	0/1:27,2:27:9.14:224,0,9	1/1:20,0:19:2.95:19,3,0	0/0:20,0:18:4.19:0,4,22	1/1:25,0:24:0.89:2,1,0	0/0:26,0:26:18:0,18,104	1/1:34,2:35:8.27:427,8,0	0/1:20,0:20:39.57:138,0,40	0/0:31,0:28:2.20:0,2,102	0/0:28,0:25:32.19:0,32,204	0/1:26,0:26:4.60:5,0,53	0/1:40,0:44:3.60:4,0,46	0/1:30,1:28:70.57:330,0,71	0/1:18,1:19:14.25:281,0,14	0/0:11,0:9:6.18:0,6,34	1/1:15,9:21:30.02:336,30,0	0/1:10,9:19:12.39:96,0,12	0/1:20,7:27:20.91:21,0,108	0/1:22,4:25:12.03:203,0,12	0/1:29,0:29:0.01:0,0,0	0/0:16,0:13:0.32:0,0,1	0/0:13,0:12:2.93:0,3,19	0/1:29,0:28:13.03:13,0,82	0/1:21,0:20:12.80:19,0,13	0/0:12,0:11:7.74:0,8,81
chr10	21507619	.	TATAC	T	1061.43	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.689;DP=1148;FS=17.892;HRun=0;HaplotypeScore=222.3172;InbreedingCoeff=0.9048;MQ=60.23;MQ0=2;MQRankSum=-5.309;QD=29.48;ReadPosRankSum=-4.473;VQSLOD=1.5827;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:6.01:0,6,812	0/0:14,0:14:39.11:0,39,892	0/0:44,0:31:58.26:0,58,989	0/0:48,0:37:69.25:0,69,1651	0/0:39,0:39:89.78:0,90,2237	0/0:24,0:24:66.23:0,66,1679	0/0:24,0:24:62.84:0,63,1458	1/1:11,25:36:75.09:1156,75,0	0/0:51,0:51:99:0,129,3153	0/0:60,0:60:99:0,175,4210	0/0:29,0:29:81.20:0,81,2009	0/0:70,0:70:99:0,178,4340	0/0:64,0:64:99:0,169,4041	0/0:58,0:58:99:0,150,3370	0/0:69,0:69:99:0,167,3832	0/0:53,0:53:99:0,153,3750	0/0:24,0:24:31.04:0,31,1313	0/0:29,0:29:62.15:0,62,1689	0/0:16,0:16:42.12:0,42,906	0/0:40,0:40:99:0,105,2589	0/0:46,0:46:99:0,120,2824	0/0:46,0:46:99:0,111,2723	0/0:40,0:40:74.29:0,74,1710	0/0:43,0:43:99:0,117,2733	0/0:36,0:36:81.07:0,81,1973	0/0:44,0:44:99:0,126,3155	0/0:36,0:36:90.23:0,90,2279	0/0:34,0:34:96.24:0,96,2241
chr10	21507700	.	T	TACATAC	2418.56	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-4.039;DP=1130;FS=12.620;HRun=0;HaplotypeScore=254.8261;InbreedingCoeff=0.9844;MQ=56.72;MQ0=7;MQRankSum=-3.635;QD=63.65;ReadPosRankSum=-5.975;VQSLOD=1.6276;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:43:59.32:0,59,1237	0/0:22,0:22:63.18:0,63,1309	0/0:38,0:20:41.49:0,41,636	0/0:25,0:11:25.71:0,26,420	0/0:40,0:40:99:0,105,2054	0/0:32,0:32:90.31:0,90,2038	0/0:37,0:37:99:0,102,2178	1/1:5,28:38:99:2513,111,0	0/0:46,0:46:99:0,129,2851	0/0:57,0:57:99:0,166,3674	0/0:35,0:35:96.29:0,96,2015	0/0:52,0:52:99:0,153,3300	0/0:58,0:58:99:0,165,3542	0/0:56,0:56:99:0,157,3537	0/0:62,0:62:99:0,181,3950	0/0:49,0:49:99:0,132,2838	0/0:26,0:26:56.97:0,57,1182	0/0:30,0:31:47.03:0,47,1587	0/0:25,0:23:63.11:0,63,1340	0/0:49,0:49:99:0,123,2623	0/0:34,0:34:90.28:0,90,2038	0/0:39,0:39:99:0,99,2234	0/0:47,0:47:99:0,114,2449	0/0:27,0:27:69.03:0,69,1449	0/0:44,0:43:99:0,117,2670	0/0:50,0:50:99:0,150,3324	0/0:50,0:50:99:0,144,3084	0/0:18,0:18:15.43:0,15,1079
chr10	21507736	.	CAT	C	439.78	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.509;DP=1033;FS=9.804;HRun=0;HaplotypeScore=151.2428;InbreedingCoeff=0.9993;MQ=60.82;MQ0=1;MQRankSum=-6.887;QD=31.41;ReadPosRankSum=-2.990;VQSLOD=3.9623;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:75.77:0,76,1580	0/0:23,0:23:69.19:0,69,1242	0/0:24,0:20:48.24:0,48,1034	0/0:24,1:18:29.37:0,29,628	0/0:42,0:42:99:0,123,2357	0/0:26,0:26:75.24:0,75,1382	0/0:28,0:28:78.26:0,78,1506	1/1:2,12:14:36.12:535,36,0	0/0:50,0:50:99:0,147,2687	0/0:74,0:74:99:0,220,4170	0/0:37,0:37:99:0,108,2084	0/0:42,0:42:99:0,123,2283	0/0:45,0:45:99:0,132,2505	0/0:49,0:49:99:0,147,2700	0/0:47,0:47:99:0,141,2662	0/0:46,0:46:99:0,138,2577	0/0:28,0:28:78.24:0,78,1429	0/0:29,0:29:64.89:0,65,1292	0/0:21,0:20:63.22:0,63,1193	0/0:44,0:44:99:0,129,2426	0/0:31,0:31:81.26:0,81,1496	0/0:33,0:33:99:0,99,1825	0/0:47,0:47:99:0,132,2488	0/0:27,0:27:71.99:0,72,1374	0/0:39,0:38:99:0,114,2154	0/0:46,0:46:99:0,138,2637	0/0:40,0:40:99:0,120,2301	0/0:33,0:33:79.31:0,79,1671
chr10	21507771	.	A	AG	38.61	PASS	AB=0.667;AC=1;AF=0.018;AN=56;BaseQRankSum=5.177;DP=1043;FS=4.655;HRun=1;HaplotypeScore=134.0445;InbreedingCoeff=-0.0019;MQ=61.62;MQ0=0;MQRankSum=-4.114;QD=6.44;ReadPosRankSum=-2.666;VQSLOD=-0.2519;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,1:42:40.05:0,40,912	0/0:21,0:21:63.21:0,63,878	0/0:50,0:41:82.66:0,83,1288	0/0:39,0:28:71.92:0,72,951	0/0:40,0:40:99:0,120,1677	0/0:23,0:23:69.23:0,69,952	0/0:28,0:28:75.22:0,75,1027	0/1:1,3:6:20.86:113,0,21	0/0:52,0:52:99:0,157,2162	0/0:63,0:63:99:0,184,2543	0/0:29,0:29:81.24:0,81,1115	0/0:43,0:43:99:0,129,1786	0/0:48,0:48:99:0,141,1953	0/0:48,0:48:99:0,141,1971	0/0:45,0:45:99:0,129,1787	0/0:39,0:39:99:0,117,1636	0/0:29,0:29:71.05:0,71,969	0/0:24,0:24:63.16:0,63,856	0/0:25,0:24:72.23:0,72,988	0/0:51,0:51:99:0,153,2104	0/0:33,0:33:90.30:0,90,1257	0/0:41,0:41:99:0,117,1635	0/0:45,0:45:99:0,129,1803	0/0:33,1:34:83.89:0,84,1173	0/0:38,0:37:99:0,108,1510	0/0:46,0:46:99:0,138,1901	0/0:33,0:33:96.32:0,96,1343	0/0:28,0:28:79.12:0,79,1029
chr10	21507772	.	C	CAT	57.70	PASS	AB=0.955;AC=3;AF=0.054;AN=56;BaseQRankSum=6.504;DP=1050;FS=4.133;HRun=0;HaplotypeScore=156.5730;InbreedingCoeff=0.6756;MQ=61.51;MQ0=0;MQRankSum=-4.635;QD=1.20;ReadPosRankSum=-1.421;VQSLOD=2.1897;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:40,2:42:6.89:7,0,959	0/0:22,0:22:60.20:0,60,917	0/0:49,0:39:73.86:0,74,1298	0/0:38,0:28:71.68:0,72,1043	0/0:41,0:41:99:0,120,1834	0/0:23,0:23:69.20:0,69,1007	0/0:29,0:29:81.20:0,81,1130	1/1:3,3:6:14.78:145,15,0	0/0:53,0:53:99:0,156,2334	0/0:63,0:63:99:0,187,2770	0/0:28,0:28:78.97:0,79,1150	0/0:44,0:44:99:0,129,1928	0/0:49,0:49:99:0,141,2135	0/0:48,0:48:99:0,141,2135	0/0:45,0:45:99:0,129,1932	0/0:41,0:41:99:0,117,1766	0/0:30,0:30:74.61:0,75,1106	0/0:24,0:24:60.04:0,60,862	0/0:24,0:23:69.21:0,69,1031	0/0:51,0:51:99:0,153,2298	0/0:35,0:35:90.30:0,90,1373	0/0:41,0:41:99:0,117,1783	0/0:44,0:44:99:0,132,1928	0/0:33,1:34:81:0,81,1215	0/0:38,0:37:99:0,108,1650	0/0:46,0:46:99:0,135,2008	0/0:34,0:34:99:0,99,1468	0/0:28,0:28:53.47:0,53,1085
chr10	21507848	.	A	AC	147.39	PASS	AB=0.722;AC=1;AF=0.018;AN=56;BaseQRankSum=5.047;DP=987;FS=23.231;HRun=0;HaplotypeScore=121.4502;InbreedingCoeff=-0.0185;MQ=63.02;MQ0=2;MQRankSum=-3.914;QD=11.34;ReadPosRankSum=-2.906;VQSLOD=1.9029;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:44:94.57:0,95,1272	0/0:15,0:15:45.15:0,45,629	0/0:24,0:12:28.96:0,29,319	0/0:14,0:9:16.56:0,17,188	0/0:46,0:46:99:0,138,1930	0/0:34,0:34:93.31:0,93,1299	0/0:16,0:16:45.15:0,45,629	0/1:8,5:13:45.42:222,0,45	0/0:44,0:44:99:0,129,1766	0/0:56,0:56:99:0,169,2336	0/0:21,0:21:63.21:0,63,881	0/0:45,0:45:99:0,135,1811	0/0:38,0:38:99:0,111,1534	0/0:51,0:51:99:0,153,2121	0/0:53,0:53:99:0,150,2066	0/0:39,0:39:99:0,117,1636	0/0:24,0:24:63.68:0,64,877	0/0:29,0:29:77.62:0,78,1048	0/0:23,0:23:66.21:0,66,907	0/0:50,0:50:99:0,147,2021	0/0:48,0:48:99:0,129,1786	0/0:52,0:52:99:0,157,2165	0/0:33,0:33:99:0,99,1385	0/0:28,0:28:72.11:0,72,1007	0/0:27,0:27:81.25:0,81,1114	0/0:52,0:52:99:0,156,2149	0/0:35,0:35:99:0,102,1425	0/0:33,0:33:96.32:0,96,1342
chr10	21511757	.	C	CA	871.85	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-7.672;DP=643;FS=10.714;HRun=7;HaplotypeScore=58.0506;InbreedingCoeff=0.9433;MQ=76.85;MQ0=0;MQRankSum=-2.407;QD=29.06;ReadPosRankSum=-4.466;VQSLOD=1.7823;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:57.09:0,57,549	0/0:20,0:20:57.09:0,57,550	0/0:10,0:11:29.08:0,29,266	0/0:15,0:15:38.85:0,39,349	0/0:34,0:34:96.13:0,96,916	0/0:29,0:29:78.12:0,78,753	0/0:10,0:10:27.04:0,27,261	1/1:3,27:30:81.24:967,81,0	0/0:22,0:22:57.09:0,57,550	0/0:27,0:27:72.11:0,72,695	0/0:36,0:36:89.80:0,90,844	0/0:29,0:29:84.12:0,84,811	0/0:33,0:33:90.11:0,90,857	0/0:14,0:14:36.06:0,36,348	0/0:28,0:28:75.11:0,75,720	0/0:21,0:21:37.74:0,38,476	0/0:20,0:20:48.07:0,48,463	0/0:16,0:16:39.01:0,39,358	0/0:17,0:17:51.06:0,51,485	0/0:37,0:37:99:0,105,1002	0/0:16,0:16:45.06:0,45,429	0/0:29,0:29:78.12:0,78,753	0/0:23,0:23:60.09:0,60,579	0/0:17,0:17:45.07:0,45,435	0/0:26,0:26:66.07:0,66,624	0/0:29,0:29:75.10:0,75,717	0/0:30,0:30:81.12:0,81,782	0/0:3,0:3:9.01:0,9,87
chr10	21512367	.	CA	C	9901.99	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=14.401;DP=662;FS=2.107;HRun=7;HaplotypeScore=65.0457;InbreedingCoeff=0.9984;MQ=77.84;MQ0=0;MQRankSum=-1.630;QD=26.48;ReadPosRankSum=3.780;VQSLOD=5.6028;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,24:26:61.56:640,62,0	0/0:14,0:14:39.10:0,39,475	0/0:12,0:12:24.07:0,24,280	0/0:17,0:17:41.86:0,42,431	0/0:44,0:44:99:0,120,1459	1/1:2,25:27:72.16:735,72,0	1/1:1,6:7:18.04:184,18,0	1/1:2,22:24:63.57:620,64,0	1/1:4,17:21:48.11:490,48,0	0/0:32,0:32:84.26:0,84,1045	0/0:30,0:30:84.27:0,84,1057	1/1:2,23:25:63.14:643,63,0	1/1:1,25:26:69.16:704,69,0	1/1:3,16:19:42.09:428,42,0	1/1:1,28:29:78.18:796,78,0	0/0:18,0:18:51.16:0,51,642	0/0:27,1:27:47.66:0,48,895	1/1:1,12:13:33.07:336,33,0	0/0:20,0:20:57.17:0,57,692	0/0:36,0:36:90.27:0,90,1107	0/0:10,0:10:27.07:0,27,327	0/0:27,0:27:69.22:0,69,868	1/1:4,26:30:75.17:765,75,0	1/1:0,20:20:54.12:551,54,0	1/1:1,34:35:99:1041,102,0	1/1:4,22:26:65.89:654,66,0	1/1:1,29:30:81.18:826,81,0	1/1:0,16:16:48.11:490,48,0
chr10	21512708	.	G	GA	666.90	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-7.432;DP=673;FS=12.697;HRun=8;HaplotypeScore=59.9694;InbreedingCoeff=0.9507;MQ=69.29;MQ0=0;MQRankSum=-3.166;QD=24.70;ReadPosRankSum=-0.302;VQSLOD=3.3368;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:93.01:0,93,840	0/0:8,0:8:21:0,21,192	0/0:20,0:20:10.92:0,11,348	0/0:10,0:10:18.01:0,18,165	0/0:26,0:26:72.04:0,72,659	0/0:27,0:27:75.03:0,75,682	0/0:20,0:20:57.03:0,57,522	0/0:30,1:31:78.02:0,78,711	0/0:21,0:21:57.03:0,57,522	0/0:38,0:38:99:0,102,934	0/0:25,0:25:66.03:0,66,604	0/0:19,0:19:48.02:0,48,439	0/0:22,0:22:51.02:0,51,467	0/0:30,0:30:78:0,78,704	1/1:4,23:27:66.20:762,66,0	0/0:21,0:21:53.99:0,54,490	0/0:23,0:23:60.03:0,60,549	0/0:24,0:25:58.91:0,59,509	0/0:31,0:31:78:0,78,708	0/0:29,0:29:81.01:0,81,732	0/0:15,0:15:36:0,36,330	0/0:19,0:19:48:0,48,434	0/0:29,0:29:75.04:0,75,686	0/0:11,0:11:30:0,30,269	0/0:28,0:28:78.03:0,78,714	0/0:37,0:37:93.03:0,93,851	0/0:33,0:33:93.05:0,93,851	0/0:15,0:14:45.02:0,45,412
chr10	21514506	.	GTGT	G	3810.42	PASS	AB=1.000;AC=31;AF=0.554;AN=56;BaseQRankSum=-9.612;DP=638;FS=3.871;HRun=0;HaplotypeScore=96.7753;InbreedingCoeff=0.7093;MQ=76.18;MQ0=19;MQRankSum=4.100;QD=10.79;ReadPosRankSum=2.229;VQSLOD=3.3048;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,25:35:2.87:279,3,0	0/0:12,0:12:4.13:0,4,134	0/0:30,0:22:9.79:0,10,142	0/1:29,0:18:0.15:0,0,35	0/1:27,0:27:41.83:235,0,42	1/1:3,12:15:6.02:85,6,0	1/1:7,16:23:14.92:214,15,0	0/0:44,0:44:89.62:0,90,745	1/1:1,10:11:6.02:85,6,0	0/0:35,0:35:72.01:0,72,800	0/0:14,0:14:31.29:0,31,391	1/1:8,23:31:27.09:384,27,0	1/1:4,18:23:33.04:445,33,0	1/1:11,12:22:9.03:122,9,0	0/0:25,0:25:24.18:0,24,582	0/0:20,0:20:51.11:0,51,772	0/0:17,0:17:42.03:0,42,684	1/1:6,16:22:18.04:237,18,0	0/0:19,0:18:35.84:0,36,354	0/0:23,0:22:41.96:0,42,459	0/0:46,0:44:99:0,114,1529	0/1:15,0:15:96.59:125,0,97	1/1:15,0:14:26.97:240,27,0	1/1:5,17:23:21.12:476,21,0	1/1:5,10:15:8.90:128,9,0	1/1:6,15:20:44.97:449,45,0	1/1:7,12:19:15.05:214,15,0	1/1:4,0:4:9:91,9,0
chr10	21516370	.	TA	T	8391.63	PASS	AB=0.667;AC=47;AF=0.839;AN=56;BaseQRankSum=-2.952;DP=503;FS=12.417;HRun=11;HaplotypeScore=54.2197;InbreedingCoeff=0.8579;MQ=79.21;MQ0=1;MQRankSum=-5.190;QD=19.70;ReadPosRankSum=6.078;VQSLOD=4.5415;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,32:35:89.89:739,90,0	1/1:2,9:11:23.96:197,24,0	0/0:20,0:16:18.86:0,19,173	0/0:23,0:19:32.04:0,32,311	0/0:24,0:26:29.37:0,29,474	1/1:3,16:20:43.99:351,44,0	1/1:2,17:19:47.94:394,48,0	1/1:3,22:25:59.90:493,60,0	1/1:2,12:14:35.96:296,36,0	1/1:5,15:21:27.65:331,28,0	1/1:1,15:16:47.81:380,48,0	1/1:1,20:21:53.94:443,54,0	1/1:1,9:10:20.97:172,21,0	1/1:1,14:15:35.96:296,36,0	1/1:2,16:18:47.94:394,48,0	1/1:1,17:18:47.94:394,48,0	1/1:2,18:20:53.92:443,54,0	1/1:5,19:24:53.93:443,54,0	1/1:5,14:19:41.14:324,41,0	1/1:1,7:8:20.97:172,21,0	1/1:1,5:6:14.98:123,15,0	0/0:7,0:7:18.05:0,18,192	1/1:2,10:12:29.97:246,30,0	1/1:4,13:17:32.96:271,33,0	1/1:4,26:30:39.93:534,40,0	1/1:2,23:26:70.94:572,71,0	1/1:2,13:15:38.95:320,39,0	0/1:3,3:6:20.03:62,0,20
chr10	21516971	.	GT	G	470.80	PASS	AB=0.875;AC=3;AF=0.054;AN=56;BaseQRankSum=5.848;DP=636;FS=7.864;HRun=11;HaplotypeScore=60.8414;InbreedingCoeff=0.5647;MQ=70.48;MQ0=0;MQRankSum=0.008;QD=10.70;ReadPosRankSum=-1.183;VQSLOD=2.2567;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:93.48:0,93,1133	0/0:13,0:13:36.09:0,36,384	0/1:12,2:14:34.33:34,0,144	0/0:7,0:8:5.29:0,5,88	0/0:25,0:28:77.99:0,78,800	0/0:22,0:22:54.11:0,54,566	0/0:17,0:17:33.02:0,33,338	0/0:7,0:33:77.18:0,77,402	0/0:21,1:23:32.37:0,32,534	0/0:32,1:33:59.54:0,60,821	0/0:15,0:15:36.09:0,36,383	0/0:23,0:23:54.14:0,54,576	0/0:34,0:34:87.19:0,87,917	0/0:24,0:24:66.14:0,66,687	1/1:4,26:30:47.77:542,48,0	0/0:26,0:26:72.17:0,72,761	0/0:30,0:30:66.10:0,66,688	0/0:19,0:18:51.13:0,51,543	0/0:25,2:28:13.68:0,14,528	0/0:18,0:19:44.88:0,45,435	0/0:13,0:13:30.06:0,30,311	0/0:23,1:24:38.51:0,39,609	0/0:15,0:15:38.93:0,39,381	0/0:10,0:10:30.08:0,30,320	0/0:17,0:17:48.10:0,48,502	0/0:32,0:32:89.80:0,90,925	0/0:40,1:41:86.62:0,87,1117	0/0:4,0:4:9.02:0,9,96
chr10	21520679	.	G	GT	339.84	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=-2.516;DP=533;FS=1.671;HRun=11;HaplotypeScore=59.4631;InbreedingCoeff=0.5206;MQ=78.46;MQ0=1;MQRankSum=1.811;QD=9.18;ReadPosRankSum=-1.928;VQSLOD=2.0527;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:13,1:14:8.38:0,8,244	0/0:8,0:9:25.95:0,26,192	0/0:20,0:14:8.44:0,8,42	0/1:18,0:18:18.49:18,0,33	0/0:32,0:34:72.74:0,73,540	0/0:24,0:24:59.71:0,60,460	0/0:9,0:9:20.90:0,21,162	0/0:35,0:38:61.32:0,61,530	0/0:17,1:18:23.28:0,23,355	0/0:14,0:14:32.85:0,33,254	0/0:21,0:22:55.80:0,56,421	0/0:16,0:16:25.33:0,25,283	0/0:26,0:26:59.69:0,60,457	0/0:18,0:19:46.84:0,47,353	1/1:1,17:18:42.08:426,42,0	0/0:24,1:25:38.28:0,38,478	0/0:21,0:22:55.81:0,56,424	0/0:24,0:25:58.80:0,59,445	0/0:16,0:16:32.85:0,33,255	0/0:21,0:22:55.33:0,55,409	0/0:11,0:11:29.86:0,30,230	0/0:11,0:11:23.90:0,24,186	0/0:22,0:23:61.80:0,62,470	0/0:15,0:15:35.85:0,36,279	0/0:11,0:12:2.90:0,3,183	0/0:14,0:15:17.84:0,18,199	0/0:27,0:27:62.49:0,62,477	0/0:8,0:8:20.91:0,21,163
chr10	21522123	.	A	ATT	776.08	PASS	AB=0.960;AC=3;AF=0.054;AN=56;BaseQRankSum=6.620;DP=385;FS=4.141;HRun=6;HaplotypeScore=64.6510;InbreedingCoeff=0.4285;MQ=76.51;MQ0=0;MQRankSum=-4.573;QD=15.84;ReadPosRankSum=-4.482;VQSLOD=-0.5986;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:45.08:0,45,525	0/0:11,0:11:24.06:0,24,281	0/1:21,0:12:38.22:38,0,85	0/0:18,0:13:0.60:0,1,92	0/0:23,0:23:66.17:0,66,780	0/0:17,0:17:38.95:0,39,409	0/0:5,0:5:11.90:0,12,109	1/1:8,17:25:57.12:843,57,0	0/0:11,0:11:27.49:0,27,310	0/0:17,0:17:42.10:0,42,488	0/0:24,0:24:66.12:0,66,751	0/0:6,0:6:17.99:0,18,199	0/0:8,0:8:18.03:0,18,195	0/0:9,0:9:21.06:0,21,254	0/0:10,0:10:21.43:0,21,210	0/0:9,0:9:27.08:0,27,329	0/0:30,0:30:72.17:0,72,850	0/0:11,0:11:27.07:0,27,328	0/0:21,0:21:57.12:0,57,662	0/0:14,0:14:33.08:0,33,390	0/0:4,0:4:9.01:0,9,97	0/0:3,0:3:6.02:0,6,73	0/0:5,0:5:14.91:0,15,134	0/0:3,0:3:6.02:0,6,73	0/0:22,0:21:57.01:0,57,618	0/0:13,0:13:29.95:0,30,326	0/0:16,0:16:42.13:0,42,507	0/0:5,0:5:8.96:0,9,78
chr10	21522738	.	AAC	A	321.47	PASS	AC=2;AF=0.037;AN=54;BaseQRankSum=7.070;DP=290;FS=2.899;HRun=0;HaplotypeScore=41.3435;InbreedingCoeff=0.3826;MQ=76.64;MQ0=0;MQRankSum=-5.536;QD=14.61;ReadPosRankSum=-1.251;VQSLOD=2.7079;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:1,0:1:2.99:0,3,24	0/0:9,0:9:27.07:0,27,474	0/0:8,0:7:15.01:0,15,152	0/0:7,0:6:14.98:0,15,129	0/0:33,0:33:67.56:0,68,1519	0/0:2,0:2:3.01:0,3,47	0/0:1,0:1:3.01:0,3,44	1/1:0,22:22:62.22:415,62,0	0/0:1,0:1:3:0,3,25	0/0:25,0:25:72.21:0,72,1187	0/0:23,0:23:65.86:0,66,1127	0/0:5,0:5:8.99:0,9,75	0/0:4,0:4:11.97:0,12,96	0/0:7,0:7:17.98:0,18,150	0/0:21,0:21:32.99:0,33,288	0/0:15,0:15:45.11:0,45,750	0/0:14,0:14:26.93:0,27,372	0/0:5,0:5:8.94:0,9,66	0/0:12,0:12:36.10:0,36,587	0/0:34,0:34:99:0,99,1722	0/0:11,0:11:33.10:0,33,603	0/0:17,0:17:51.13:0,51,863	0/0:4,0:4:12:0,12,109	./.	0/0:2,0:2:6:0,6,51	0/0:1,0:1:3:0,3,28	0/0:3,0:3:8.98:0,9,73	0/0:3,0:3:5.97:0,6,46
chr10	21522753	.	A	ATGTGTG	762.25	PASS	AB=1.000;AC=5;AF=0.096;AN=52;BaseQRankSum=2.957;DP=290;FS=2.929;HRun=0;HaplotypeScore=68.0402;InbreedingCoeff=0.6108;MQ=70.21;MQ0=0;MQRankSum=-5.494;QD=24.59;ReadPosRankSum=2.346;VQSLOD=3.2257;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:4:2.69:8,3,0	0/0:8,0:8:24.08:0,24,563	0/0:5,0:4:6.02:0,6,120	0/0:8,0:6:8.86:0,9,83	0/0:34,0:34:99:0,102,2228	0/0:4,0:4:12:0,12,124	0/0:5,0:5:12.02:0,12,142	./.	0/0:5,0:5:15.02:0,15,195	0/0:21,0:21:63.19:0,63,1352	0/0:27,0:27:77.95:0,78,1646	0/1:3,0:3:0:0,0,0	0/0:5,0:5:12.01:0,12,149	0/0:4,0:4:9:0,9,109	1/1:2,15:24:27.09:854,27,0	0/0:15,0:15:45.13:0,45,1000	0/0:13,0:13:24.06:0,24,507	0/0:5,0:5:8.43:0,8,114	0/0:14,0:14:39.12:0,39,842	0/0:36,0:36:99:0,108,2435	0/0:11,0:11:30.10:0,30,734	0/0:18,0:18:51.16:0,51,1179	0/0:5,0:5:8.77:0,9,110	0/0:3,0:3:6:0,6,87	0/0:5,0:5:11.92:0,12,110	0/0:3,0:3:8.96:0,9,83	0/0:5,0:5:8.95:0,9,89	./.
chr10	21522891	.	T	TATCC	10922.77	PASS	AB=0.690;AC=45;AF=0.804;AN=56;BaseQRankSum=-6.033;DP=470;FS=1.807;HRun=0;HaplotypeScore=72.8050;InbreedingCoeff=0.5589;MQ=69.18;MQ0=4;MQRankSum=1.518;QD=28.08;ReadPosRankSum=1.698;VQSLOD=4.7957;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,14:24:24.08:572,24,0	1/1:1,10:11:18.06:428,18,0	0/0:34,0:26:12.04:0,12,189	0/0:24,0:20:20.82:0,21,315	0/0:16,0:16:30.10:0,30,475	1/1:3,6:9:15.05:357,15,0	1/1:9,3:13:3.01:72,3,0	1/1:36,0:36:7.53:428,8,0	1/1:4,14:19:30.10:715,30,0	0/1:10,10:20:13.92:642,0,14	1/1:6,5:11:12.04:286,12,0	1/1:2,8:11:18.06:429,18,0	1/1:11,9:21:27.09:643,27,0	1/1:5,12:18:36.12:855,36,0	1/1:15,0:20:5.89:91,6,0	1/1:8,18:26:39.03:929,39,0	1/1:10,8:18:24.07:525,24,0	0/1:9,4:14:4.93:271,0,5	1/1:8,10:19:33.10:657,33,0	1/1:8,5:13:21.07:495,21,0	1/1:2,11:13:18.06:429,18,0	0/0:7,0:7:9.03:0,9,142	1/1:3,5:8:14.92:346,15,0	1/1:6,12:18:27.09:643,27,0	1/1:8,4:13:6.02:143,6,0	0/1:6,6:12:70.91:394,0,71	1/1:9,4:13:12.04:286,12,0	1/1:2,5:7:12.04:286,12,0
chr10	21524116	.	A	AACAC	2450.63	PASS	AB=0.894;AC=33;AF=0.635;AN=52;BaseQRankSum=-0.566;DP=603;FS=8.905;HRun=0;HaplotypeScore=126.1283;InbreedingCoeff=-0.0446;MQ=62.20;MQ0=8;MQRankSum=-1.887;QD=5.01;ReadPosRankSum=-0.111;VQSLOD=1.9282;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:38,2:42:19.29:486,19,0	1/1:9,0:8:9:106,9,0	./.	./.	1/1:17,0:17:9.03:156,9,0	0/1:18,1:19:5.96:39,0,6	1/1:27,0:29:0.86:79,1,0	0/0:25,0:24:2.98:0,3,22	0/1:25,0:26:35.96:36,0,56	1/1:22,0:22:31.78:364,32,0	1/1:12,4:14:6.02:140,6,0	0/1:18,0:18:31.50:92,0,31	0/1:17,0:20:36.81:37,0,104	0/0:25,0:24:12.01:0,12,144	0/1:17,0:28:13.90:14,0,57	1/1:18,8:30:15.19:203,15,0	0/1:12,1:25:16.15:124,0,16	0/1:22,0:24:21.42:21,0,159	0/1:11,0:11:36.79:66,0,37	1/1:9,1:17:11.51:135,12,0	1/1:21,11:38:9.87:183,10,0	1/1:19,0:18:12:118,12,0	0/0:12,0:12:8.76:0,9,91	0/1:23,0:31:31.84:32,0,43	0/1:26,0:28:70.14:70,0,82	1/1:12,0:11:0.47:1,0,0	0/0:13,0:14:6.06:0,6,71	0/1:7,0:7:30.87:107,0,31
chr10	21525131	.	G	GAT	3075.64	PASS	AB=0.586;AC=12;AF=0.214;AN=56;BaseQRankSum=-10.269;DP=416;FS=1.643;HRun=0;HaplotypeScore=56.5320;InbreedingCoeff=0.4222;MQ=78.49;MQ0=1;MQRankSum=-0.623;QD=26.51;ReadPosRankSum=1.153;VQSLOD=4.2187;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:30.09:0,30,372	0/1:2,4:6:56.32:178,0,56	0/0:9,0:7:2.56:0,3,14	0/0:18,0:16:9.24:0,9,76	0/0:28,1:29:23:0,23,780	0/0:15,0:15:39.11:0,39,470	0/0:11,0:11:24.08:0,24,298	0/0:10,0:38:50.54:0,51,275	0/0:18,0:18:42.10:0,42,494	0/1:9,7:16:4.11:412,0,4	1/1:4,13:17:27.09:443,27,0	0/0:15,0:15:36.11:0,36,446	0/0:7,0:7:15.03:0,15,173	0/0:17,0:17:45.12:0,45,534	0/1:4,12:16:0.94:505,0,1	0/1:2,10:12:16.12:274,0,16	1/1:3,15:18:33.11:541,33,0	0/0:14,0:14:33.10:0,33,408	0/1:1,10:11:4.13:420,0,4	0/1:5,13:18:7.09:413,0,7	1/1:0,1:1:3.01:49,3,0	0/0:2,0:2:3.01:0,3,37	0/0:12,0:12:24.06:0,24,285	0/0:7,0:7:18.06:0,18,223	0/0:11,0:11:27.08:0,27,335	0/0:27,0:27:66.21:0,66,818	0/0:23,0:23:63.16:0,63,763	0/0:12,0:12:24.06:0,24,284
chr10	21525716	.	T	TCA	1319.92	PASS	AB=0.920;AC=3;AF=0.054;AN=56;BaseQRankSum=-7.842;DP=838;FS=4.107;HRun=0;HaplotypeScore=109.6674;InbreedingCoeff=0.6404;MQ=72.81;MQ0=3;MQRankSum=1.330;QD=22.00;ReadPosRankSum=-6.261;VQSLOD=2.3540;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:45,1:46:47.84:0,48,1079	0/0:6,0:6:15.05:0,15,182	0/0:37,0:30:35.98:0,36,406	0/0:37,0:31:33.84:0,34,391	0/0:28,0:28:69.21:0,69,837	0/0:27,0:27:51.14:0,51,605	0/0:23,0:24:54:0,54,633	1/1:7,28:36:92.09:1392,92,0	0/0:25,0:25:60.18:0,60,728	0/0:28,0:28:72.20:0,72,861	0/0:20,0:20:42.13:0,42,510	0/0:24,0:24:66.19:0,66,790	0/0:37,0:37:87.27:0,87,1056	0/0:25,0:25:71.57:0,72,833	0/0:38,0:38:87.27:0,87,1055	0/0:42,0:42:99:0,102,1227	0/0:34,0:35:72.12:0,72,866	0/0:30,0:30:84.21:0,84,992	0/0:28,0:28:63.17:0,63,751	0/0:34,0:34:90.28:0,90,1092	0/0:40,0:40:90.23:0,90,1055	0/0:29,0:29:72.20:0,72,861	0/1:21,2:23:33.64:34,0,628	0/0:44,0:45:99:0,102,1204	0/0:25,0:25:57.16:0,57,681	0/0:29,0:29:75.23:0,75,910	0/0:24,0:24:69.21:0,69,837	0/0:15,0:15:39.12:0,39,473
chr10	21525803	.	AAC	A	354.33	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.044;DP=798;FS=0.861;HRun=0;HaplotypeScore=97.9081;InbreedingCoeff=0.8432;MQ=59.56;MQ0=16;MQRankSum=1.525;QD=13.12;ReadPosRankSum=-2.431;VQSLOD=3.0990;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:96.30:0,96,1488	0/0:12,0:12:30.10:0,30,482	0/0:20,0:14:36.09:0,36,478	0/0:20,0:14:19.93:0,20,427	0/0:26,0:26:66.21:0,66,1055	0/0:31,0:31:75.18:0,75,1137	0/0:20,1:21:16.65:0,17,775	1/1:13,14:20:36.11:449,36,0	0/0:27,0:26:69.24:0,69,1113	0/0:27,0:27:65.43:0,65,1024	0/0:14,1:15:4.61:0,5,588	0/0:24,1:25:28.67:0,29,957	0/0:37,0:36:65.29:0,65,1584	0/0:22,0:21:51.17:0,51,803	0/0:41,0:41:99:0,105,1712	0/0:36,1:37:58.78:0,59,1452	0/0:37,1:38:46.76:0,47,1284	0/0:27,0:27:72.19:0,72,1094	0/0:26,0:22:24.46:0,24,763	0/0:27,0:26:69.15:0,69,1092	0/0:37,2:38:52.78:0,53,1366	0/0:18,0:18:45.15:0,45,738	0/0:25,0:25:66.20:0,66,1017	0/0:50,0:49:99:0,129,2068	0/0:36,0:36:87.30:0,87,1419	0/0:43,0:42:99:0,117,1825	0/0:35,0:35:87.30:0,87,1406	0/0:6,0:6:12.04:0,12,182
chr10	21527625	.	T	TC	6909.29	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-15.334;DP=707;FS=11.568;HRun=2;HaplotypeScore=65.7512;InbreedingCoeff=0.9994;MQ=86.92;MQ0=0;MQRankSum=-2.545;QD=38.60;ReadPosRankSum=1.761;VQSLOD=4.7828;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,141,1733	1/1:1,11:12:26.93:389,27,0	0/0:29,0:29:67.09:0,67,811	0/0:20,0:20:51.16:0,51,625	0/0:26,0:26:75.24:0,75,927	0/0:25,0:25:72.23:0,72,892	0/0:21,0:21:63.20:0,63,780	0/0:42,0:42:99:0,114,1393	0/0:28,0:28:84.25:0,84,1028	1/1:3,15:18:42.14:605,42,0	1/1:1,18:19:48.16:691,48,0	0/0:26,0:26:78.25:0,78,967	0/0:21,0:21:60.19:0,60,743	0/0:35,0:35:93.28:0,93,1139	0/0:32,0:32:90.27:0,90,1103	1/1:1,29:30:53.11:1216,53,0	1/1:1,34:35:96.32:1382,96,0	0/0:10,0:9:30.09:0,30,371	1/1:0,23:23:69.23:993,69,0	1/1:2,14:16:39.04:512,39,0	1/1:0,26:26:78.26:1123,78,0	0/0:21,0:21:60.19:0,60,743	0/0:21,0:21:63.18:0,63,759	0/0:34,0:34:93.25:0,93,1139	0/0:20,0:20:54.16:0,54,658	0/0:37,2:39:28.02:0,28,1233	0/0:21,0:20:63.20:0,63,781	0/0:9,0:9:27.08:0,27,335
chr10	21528850	.	G	GGACCCCTT	3511.17	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-3.053;DP=630;FS=4.844;HRun=0;HaplotypeScore=178.8432;InbreedingCoeff=0.9818;MQ=89.57;MQ0=0;MQRankSum=-7.318;QD=121.07;ReadPosRankSum=-3.560;VQSLOD=3.4732;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:93.31:0,93,2700	0/0:5,0:5:15.05:0,15,454	0/0:17,0:17:45.07:0,45,1029	0/0:31,0:31:90.20:0,90,2412	0/0:18,0:18:51.15:0,51,1387	0/0:30,0:30:90.20:0,90,2580	0/0:32,0:32:96.33:0,96,2850	1/1:13,13:29:87.24:3511,87,0	0/0:38,0:38:99:0,114,3337	0/0:17,0:17:51.16:0,51,1317	0/0:19,0:19:54.19:0,54,1554	0/0:23,0:23:69.24:0,69,2078	0/0:27,0:27:81.26:0,81,2299	0/0:25,0:25:72.25:0,72,2054	0/0:24,0:24:72.25:0,72,2160	0/0:23,0:23:66.23:0,66,1977	0/0:33,0:33:93.32:0,93,2659	0/0:15,0:15:42.14:0,42,1178	0/0:12,0:12:36.12:0,36,1007	0/0:20,0:20:60.21:0,60,1815	0/0:43,0:43:99:0,123,3565	0/0:18,0:18:54.19:0,54,1565	0/0:10,0:10:30.10:0,30,846	0/0:22,0:22:66.23:0,66,1974	0/0:15,0:15:42.13:0,42,1161	0/0:30,0:30:90.31:0,90,2635	0/0:14,0:14:42.13:0,42,1206	0/0:8,0:8:24.08:0,24,727
chr10	21529266	.	TACCA	T	1718.61	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.987;DP=758;FS=9.925;HRun=0;HaplotypeScore=122.4489;InbreedingCoeff=0.9970;MQ=80.35;MQ0=0;MQRankSum=-7.651;QD=52.08;ReadPosRankSum=-3.563;VQSLOD=3.6607;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,129,3555	0/0:11,0:11:33.10:0,33,863	0/0:25,0:26:78.23:0,78,1946	0/0:24,0:24:72.15:0,72,1771	0/0:24,0:24:72.25:0,72,2010	0/0:20,0:20:60.21:0,60,1678	0/0:32,0:32:93.32:0,93,2485	1/1:2,31:33:93.29:1813,93,0	0/0:31,0:31:90.31:0,90,2474	0/0:10,0:10:30.10:0,30,840	0/0:28,0:28:84.29:0,84,2349	0/0:44,0:44:99:0,132,3508	0/0:42,0:42:99:0,126,3479	0/0:42,0:42:99:0,123,3181	0/0:35,0:35:99:0,105,2730	0/0:37,0:37:99:0,108,2958	0/0:35,0:35:99:0,102,2816	0/0:16,0:16:48.14:0,48,1265	0/0:24,0:24:72.25:0,72,1953	0/0:25,0:25:69.24:0,69,1925	0/0:35,0:35:99:0,102,2753	0/0:21,0:21:63.20:0,63,1673	0/0:11,0:11:33.11:0,33,923	0/0:24,0:24:72.25:0,72,1961	0/0:17,0:17:48.16:0,48,1343	0/0:33,0:33:96.33:0,96,2650	0/0:27,0:27:78.27:0,78,2150	0/0:8,0:8:24.08:0,24,567
chr10	21529625	.	AT	A	612.26	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.258;DP=602;FS=0.721;HRun=9;HaplotypeScore=81.5312;InbreedingCoeff=0.9212;MQ=73.97;MQ0=0;MQRankSum=-1.354;QD=19.75;ReadPosRankSum=-3.987;VQSLOD=2.3802;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:66.19:0,66,762	0/0:8,0:8:7.50:0,8,194	0/0:25,0:22:39.11:0,39,446	0/0:21,0:18:36.07:0,36,392	0/0:35,0:35:90.26:0,90,1030	0/0:24,0:24:63.18:0,63,718	0/0:22,0:22:60.18:0,60,693	1/1:5,26:30:78.01:707,78,0	0/0:11,0:12:20.88:0,21,214	0/0:23,0:23:57.17:0,57,657	0/0:30,0:30:81.24:0,81,934	0/0:20,0:20:51.12:0,51,574	0/0:23,0:23:69.20:0,69,796	0/0:18,0:18:51.12:0,51,561	0/0:24,1:25:47.76:0,48,804	0/0:21,0:20:54.16:0,54,623	0/0:27,0:27:61.83:0,62,688	0/0:17,0:17:42.58:0,43,474	0/0:22,0:22:60.16:0,60,675	0/0:29,0:29:84.22:0,84,949	0/0:15,0:15:36.11:0,36,415	0/0:8,0:8:24.07:0,24,277	0/0:24,0:24:69.20:0,69,793	0/0:14,0:14:39.11:0,39,448	0/0:23,0:23:69.21:0,69,796	0/0:26,0:26:72.21:0,72,831	0/0:24,0:23:69.20:0,69,796	0/0:12,0:12:36.11:0,36,415
chr10	21531619	.	G	GA	731.41	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=-1.321;DP=419;FS=6.811;HRun=8;HaplotypeScore=42.0487;InbreedingCoeff=0.5723;MQ=78.72;MQ0=0;MQRankSum=-0.829;QD=17.84;ReadPosRankSum=-4.619;VQSLOD=1.9025;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:42.02:0,42,384	0/0:4,0:4:9:0,9,82	0/1:11,0:11:15.01:15,0,137	0/0:11,0:11:13.91:0,14,107	0/0:26,0:26:54.01:0,54,494	0/0:24,0:25:59.06:0,59,528	0/0:11,0:11:27.01:0,27,247	1/1:5,25:30:72.20:821,72,0	0/0:10,0:10:30.02:0,30,275	0/0:14,0:14:33:0,33,302	0/0:14,0:14:39.02:0,39,357	0/0:9,0:9:21:0,21,192	0/0:10,0:10:30.02:0,30,275	0/0:16,0:16:36.02:0,36,330	0/0:16,0:16:42.02:0,42,384	0/0:12,0:12:33.02:0,33,302	0/0:34,0:34:90.03:0,90,823	0/0:9,0:9:27:0,27,241	0/0:17,0:17:42:0,42,377	0/0:31,0:31:84.04:0,84,769	0/0:6,0:6:18.01:0,18,165	0/0:6,0:6:15.01:0,15,137	0/0:21,1:22:13.36:0,13,367	0/0:4,0:4:12.01:0,12,110	0/0:12,0:12:30:0,30,269	0/0:21,0:21:54.03:0,54,494	0/0:18,0:18:45.02:0,45,412	0/0:5,0:5:12:0,12,110
chr10	21532582	.	C	CGTGT	4959.44	PASS	AB=1.000;AC=48;AF=0.923;AN=52;BaseQRankSum=-1.192;DP=660;FS=1.442;HRun=0;HaplotypeScore=152.5216;InbreedingCoeff=0.3058;MQ=57.80;MQ0=14;MQRankSum=-1.944;QD=8.51;ReadPosRankSum=-1.294;VQSLOD=4.0765;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:17,19:38:14.86:355,15,0	1/1:10,0:10:3.01:54,3,0	./.	./.	1/1:34,0:33:6.02:121,6,0	1/1:12,8:20:2.72:70,3,0	1/1:6,6:14:8.49:153,8,0	1/1:27,0:26:18.90:269,19,0	1/1:4,6:12:8.77:154,9,0	1/1:30,0:32:30.63:519,31,0	0/1:32,0:32:0.09:0,0,0	1/1:7,8:19:13.88:234,14,0	1/1:10,3:16:8.04:95,8,0	1/1:15,7:28:15.05:328,15,0	0/0:9,0:17:21.02:0,21,195	1/1:23,0:23:12.04:191,12,0	1/1:21,0:24:8.96:122,9,0	1/1:11,3:14:8.82:162,9,0	0/1:20,0:20:7.46:135,0,7	1/1:34,0:34:6.02:99,6,0	1/1:23,0:21:3.01:69,3,0	1/1:16,0:15:6.02:106,6,0	1/1:11,8:24:6.23:84,6,0	1/1:17,8:29:23.55:449,24,0	1/1:16,9:27:20.01:366,20,0	1/1:21,8:31:36.63:548,37,0	1/1:20,0:20:13.20:194,13,0	1/1:4,7:14:5.75:83,6,0
chr10	21534775	.	T	TTG	721.25	PASS	AB=0.864;AC=14;AF=0.280;AN=50;BaseQRankSum=-2.836;DP=628;FS=0.000;HRun=0;HaplotypeScore=107.5726;InbreedingCoeff=0.2137;MQ=69.36;MQ0=7;MQRankSum=-0.459;QD=3.18;ReadPosRankSum=-3.809;VQSLOD=1.1756;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:45:5.05:0,5,27	0/1:6,1:7:3.02:39,0,3	./.	./.	0/0:14,0:20:8.42:0,8,42	0/0:16,0:16:2.81:0,3,14	0/0:34,0:34:8.33:0,8,42	1/1:33,0:32:3.37:17,3,0	0/0:14,0:14:5.62:0,6,31	1/1:16,5:24:7.71:88,8,0	0/1:11,4:17:34.17:76,0,34	0/0:18,0:18:4.46:0,4,21	0/0:18,0:18:19.95:0,20,100	0/0:21,0:21:14.20:0,14,70	0/0:20,0:20:14.60:0,15,89	0/1:18,4:23:33.25:128,0,33	1/1:16,11:28:20.95:253,21,0	0/1:22,0:22:17.09:23,0,17	1/1:17,0:16:5.95:62,6,0	0/1:18,4:25:26.27:38,0,26	0/1:28,1:29:11.07:145,0,11	0/0:17,0:22:16.92:0,17,85	0/0:12,0:12:8.63:0,9,49	0/0:20,0:21:16.94:0,17,84	0/0:22,0:22:2.84:0,3,14	0/0:25,0:25:1.78:0,2,11	0/0:18,0:20:1.21:0,1,3	./.
chr10	21534818	.	TGTGTGC	T	1943.08	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=4.267;DP=599;FS=1.467;HRun=0;HaplotypeScore=110.1387;InbreedingCoeff=0.3976;MQ=65.41;MQ0=11;MQRankSum=-1.256;QD=6.21;ReadPosRankSum=1.381;VQSLOD=1.9061;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:35,2:36:11.76:126,12,0	0/0:2,0:2:6.02:0,6,193	0/0:27,0:16:33.29:0,33,324	0/0:21,0:16:16.13:0,16,304	0/0:14,0:14:30.23:0,30,381	1/1:20,0:20:2.87:15,3,0	1/1:29,2:31:14.48:158,14,0	0/1:18,0:16:99:250,0,106	0/1:12,0:12:9.33:9,0,22	0/0:32,0:32:72.83:0,73,1481	0/0:13,0:13:28.53:0,29,504	1/1:14,0:14:5.30:27,5,0	0/1:22,0:22:8.38:108,0,8	1/1:25,2:27:14.02:186,14,0	0/0:30,0:30:8.54:0,9,277	0/0:23,0:22:56.23:0,56,861	0/0:30,0:30:47.41:0,47,765	0/1:21,0:21:59.93:60,0,113	0/0:11,0:10:29.56:0,30,316	0/0:23,0:23:44.40:0,44,753	0/0:37,0:37:77.66:0,78,1164	0/0:23,0:22:54.21:0,54,724	0/1:22,0:22:22:257,0,22	1/1:24,1:24:35.50:390,36,0	1/1:21,0:21:2.87:15,3,0	0/1:23,0:23:16.76:275,0,17	1/1:16,0:15:32.63:239,33,0	0/1:4,0:3:16.97:18,0,17
chr10	21534820	.	TGTGC	T	3589.95	PASS	AB=0.846;AC=29;AF=0.518;AN=56;BaseQRankSum=2.923;DP=582;FS=0.918;HRun=0;HaplotypeScore=87.2907;InbreedingCoeff=0.6291;MQ=67.52;MQ0=11;MQRankSum=-0.519;QD=11.18;ReadPosRankSum=1.648;VQSLOD=2.5094;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,27:31:11.23:151,11,0	0/0:2,0:2:6.02:0,6,133	0/0:29,0:18:36.26:0,36,345	0/0:21,0:16:16.13:0,16,304	0/0:14,0:14:10.34:0,10,215	1/1:1,16:17:3.01:59,3,0	1/1:4,27:31:13.99:183,14,0	0/1:17,0:15:10.53:269,0,11	1/1:11,1:12:2.08:58,2,0	0/0:32,0:32:70.80:0,71,1062	0/0:14,0:14:6.70:0,7,393	1/1:3,10:13:5.18:116,5,0	1/1:2,21:23:16.24:333,16,0	1/1:3,20:23:14.43:254,14,0	0/1:28,1:29:53.30:53,0,76	0/0:22,0:21:26.43:0,26,584	0/0:31,0:31:49.47:0,49,604	0/1:5,15:20:50.14:146,0,50	0/0:11,0:10:29.56:0,30,265	0/0:24,0:24:47.59:0,48,606	0/0:38,0:38:77.50:0,77,919	0/0:23,0:22:26.60:0,27,416	1/1:18,3:21:44.46:417,44,0	1/1:19,5:23:62.67:685,63,0	1/1:1,18:19:3.01:60,3,0	1/1:22,1:23:32.84:455,33,0	1/1:14,0:13:35.94:326,36,0	1/1:3,0:2:2.99:24,3,0
chr10	21534822	.	TGC	T	2724.02	PASS	AB=1.000;AC=31;AF=0.554;AN=56;BaseQRankSum=4.260;DP=573;FS=0.000;HRun=0;HaplotypeScore=75.4237;InbreedingCoeff=0.7644;MQ=70.38;MQ0=9;MQRankSum=-1.700;QD=8.70;ReadPosRankSum=2.005;VQSLOD=3.2611;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:31,0:31:9.15:66,9,0	0/0:2,0:2:6.02:0,6,77	0/0:30,0:19:39.74:0,40,382	0/0:25,0:20:23.03:0,23,371	0/0:15,0:15:1.85:0,2,125	1/1:16,0:16:3:27,3,0	1/1:30,0:30:12.40:98,12,0	1/1:19,0:18:44.93:395,45,0	1/1:2,10:12:6.01:70,6,0	0/0:32,0:32:60.73:0,61,702	0/0:15,0:15:34.30:0,34,345	1/1:12,1:13:5.74:53,6,0	1/1:22,1:23:20.83:204,21,0	1/1:23,0:23:14.39:130,14,0	1/1:6,22:28:12.03:156,12,0	0/0:20,0:19:47.50:0,47,460	0/0:27,0:27:45.98:0,46,418	0/1:19,0:19:23.81:77,0,24	0/0:11,0:10:29.52:0,30,207	0/0:23,0:23:47.66:0,48,448	0/0:37,0:37:77.10:0,77,688	0/0:23,0:22:20.80:0,21,252	1/1:21,0:21:47.56:378,48,0	1/1:23,0:22:62.71:510,63,0	1/1:19,0:19:3:27,3,0	1/1:20,0:20:33.94:425,34,0	1/1:14,0:13:35.93:294,36,0	1/1:2,0:1:2.99:24,3,0
chr10	21536941	.	CT	C	6587.47	PASS	AB=0.898;AC=33;AF=0.589;AN=56;BaseQRankSum=8.632;DP=640;FS=6.188;HRun=11;HaplotypeScore=76.2603;InbreedingCoeff=0.7201;MQ=76.44;MQ0=0;MQRankSum=-0.637;QD=15.57;ReadPosRankSum=2.530;VQSLOD=5.5910;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,33:38:85.05:694,85,0	0/0:8,0:9:20.89:0,21,206	0/1:21,2:22:23.28:23,0,294	0/1:15,1:16:9.27:9,0,96	0/0:16,1:19:19.43:0,19,415	1/1:4,29:35:84.96:677,85,0	1/1:5,18:23:24.93:411,25,0	1/1:5,13:18:12:294,12,0	1/1:4,11:17:2.06:201,2,0	0/0:25,1:27:31.96:0,32,560	0/0:21,1:23:41.35:0,41,629	1/1:5,20:26:58.96:474,59,0	1/1:2,21:24:64.95:523,65,0	1/1:0,22:22:59.93:493,60,0	0/0:22,1:23:38.50:0,38,607	0/0:23,2:25:7.82:0,8,478	0/0:21,1:23:19.63:0,20,449	1/1:6,17:23:24.65:307,25,0	0/1:16,3:21:23.16:23,0,339	0/0:23,1:25:38.34:0,38,591	0/0:11,0:12:23.21:0,23,275	0/0:29,1:31:35.32:0,35,552	1/1:3,24:27:56.91:468,57,0	1/1:2,13:16:37.99:301,38,0	1/1:1,22:24:61.97:498,62,0	1/1:5,28:33:19.89:572,20,0	1/1:6,23:29:39.89:530,40,0	1/1:2,4:6:3.61:87,4,0
chr10	21540175	.	A	AC	658.71	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.309;DP=662;FS=15.322;HRun=0;HaplotypeScore=68.5161;InbreedingCoeff=0.9993;MQ=90.24;MQ0=0;MQRankSum=-3.184;QD=23.53;ReadPosRankSum=-3.752;VQSLOD=2.5366;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:93.29:0,93,1281	0/0:13,0:13:36.12:0,36,491	0/0:26,0:26:60.21:0,60,894	0/0:29,0:29:67.77:0,68,939	0/0:19,0:19:54.18:0,54,754	0/0:25,0:25:72.24:0,72,1006	0/0:14,0:14:42.14:0,42,587	1/1:1,27:28:77.94:754,78,0	0/0:26,0:26:78.25:0,78,1073	0/0:31,0:31:93.25:0,93,1251	0/0:13,0:13:39.13:0,39,544	0/0:35,0:35:99:0,105,1447	0/0:20,0:20:60.18:0,60,821	0/0:31,0:31:93.30:0,93,1283	0/0:37,0:37:99:0,105,1467	0/0:23,0:23:69.23:0,69,965	0/0:34,0:34:96.32:0,96,1339	0/0:10,0:10:30.10:0,30,420	0/0:21,0:21:63.21:0,63,878	0/0:20,0:20:60.17:0,60,804	0/0:28,0:28:78.26:0,78,1091	0/0:19,0:19:57.18:0,57,780	0/0:20,0:20:60.20:0,60,836	0/0:32,0:32:90.30:0,90,1259	0/0:17,0:16:51.17:0,51,710	0/0:17,0:17:48.16:0,48,671	0/0:22,0:21:66.22:0,66,922	0/0:20,0:20:60.20:0,60,839
chr10	21540176	.	G	GA	731.97	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=8.249;DP=664;FS=10.729;HRun=1;HaplotypeScore=68.1681;InbreedingCoeff=0.9993;MQ=90.06;MQ0=0;MQRankSum=-4.476;QD=25.24;ReadPosRankSum=-4.241;VQSLOD=1.5131;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:96.29:0,96,1318	0/0:13,0:13:36.12:0,36,501	0/0:26,0:26:68.37:0,68,949	0/0:29,0:29:75.96:0,76,993	0/0:19,0:19:54.18:0,54,749	0/0:25,0:25:75.22:0,75,1014	0/0:15,0:15:42.12:0,42,569	1/1:7,22:29:84.08:827,84,0	0/0:26,0:26:78.25:0,78,1071	0/0:30,0:30:87.29:0,87,1216	0/0:13,0:13:39.13:0,39,544	0/0:34,0:34:99:0,102,1426	0/0:19,0:19:57.19:0,57,795	0/0:31,0:31:93.30:0,93,1282	0/0:37,0:37:99:0,108,1459	0/0:24,0:24:69.23:0,69,965	0/0:34,0:34:99:0,99,1364	0/0:10,0:10:30.10:0,30,418	0/0:23,0:23:66.20:0,66,890	0/0:20,0:20:54.18:0,54,755	0/0:28,0:28:78.26:0,78,1091	0/0:19,0:19:57.19:0,57,792	0/0:20,0:20:60.20:0,60,836	0/0:32,0:32:96.26:0,96,1301	0/0:17,0:16:51.17:0,51,710	0/0:17,0:17:51.15:0,51,695	0/0:22,0:21:66.22:0,66,916	0/0:20,0:20:60.20:0,60,831
chr10	21541116	.	G	GA	1681.17	PASS	AB=0.519;AC=29;AF=0.518;AN=56;BaseQRankSum=4.928;DP=405;FS=2.933;HRun=0;HaplotypeScore=53.6143;InbreedingCoeff=0.8557;MQ=79.96;MQ0=0;MQRankSum=-0.783;QD=7.82;ReadPosRankSum=-1.052;VQSLOD=3.2471;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:35.94:0,36,193	0/0:10,0:10:30.10:0,30,419	0/0:9,0:8:22.44:0,22,245	0/0:22,0:19:35.87:0,36,416	0/0:18,0:18:48.14:0,48,636	1/1:4,15:19:5.68:103,6,0	1/1:2,13:15:9.63:130,10,0	0/0:22,0:22:18.53:0,19,186	1/1:3,8:11:10.59:136,11,0	1/1:1,10:12:26.93:237,27,0	1/1:2,13:15:23.79:206,24,0	1/1:2,9:11:10.56:126,11,0	0/1:1,13:14:0:1,0,0	1/1:3,15:18:5.94:41,6,0	0/0:17,0:17:39.13:0,39,545	0/0:15,0:15:36.05:0,36,495	0/0:15,0:15:33.09:0,33,443	1/1:0,5:5:3:26,3,0	0/0:15,0:15:33.09:0,33,427	0/0:11,0:11:24.08:0,24,335	0/0:8,0:8:12.04:0,12,168	0/0:12,0:12:36.12:0,36,493	1/1:9,0:9:23.85:195,24,0	1/1:1,11:12:13.85:167,14,0	1/1:2,13:15:5.27:38,5,0	1/1:2,11:13:33.41:280,33,0	1/1:4,30:34:13.84:182,14,0	1/1:2,10:12:4.53:25,5,0
chr10	21541739	.	C	CAT	2345.43	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-10.495;DP=710;FS=1.232;HRun=0;HaplotypeScore=80.6889;InbreedingCoeff=0.9992;MQ=83.71;MQ0=0;MQRankSum=-2.904;QD=53.31;ReadPosRankSum=-4.534;VQSLOD=2.6674;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,114,1736	0/0:10,0:10:30.10:0,30,453	0/0:13,0:13:39.10:0,39,561	0/0:29,0:29:79.14:0,79,1149	0/0:41,0:41:99:0,123,1833	0/0:28,0:28:81.27:0,81,1236	0/0:13,0:13:39.13:0,39,597	1/1:1,43:44:99:2440,129,0	0/0:21,0:21:60.18:0,60,877	0/0:29,0:29:84.27:0,84,1250	0/0:24,0:24:69.23:0,69,1051	0/0:25,0:25:75.20:0,75,1082	0/0:25,0:25:72.22:0,72,1076	0/0:20,0:20:54.18:0,54,824	0/0:30,0:30:90.29:0,90,1355	0/0:31,0:31:90.31:0,90,1378	0/0:15,0:15:42.14:0,42,641	0/0:14,0:14:42.13:0,42,621	0/0:21,0:21:60.18:0,60,860	0/0:36,0:36:99:0,105,1606	0/0:22,0:22:66.22:0,66,1010	0/0:26,0:26:78.25:0,78,1172	0/0:31,0:31:90.29:0,90,1353	0/0:15,0:15:45.15:0,45,687	0/0:21,0:21:63.21:0,63,965	0/0:38,0:38:99:0,108,1602	0/0:35,0:35:90.29:0,90,1354	0/0:14,0:14:39.13:0,39,597
chr10	21542522	.	T	TGAGAAG	2725.56	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-2.904;DP=707;FS=22.258;HRun=0;HaplotypeScore=184.7474;InbreedingCoeff=0.9967;MQ=65.60;MQ0=2;MQRankSum=-5.769;QD=73.66;ReadPosRankSum=0.610;VQSLOD=2.1930;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:54.13:0,54,1074	0/0:11,0:11:33.09:0,33,662	0/0:34,0:30:42.61:0,43,921	0/0:29,0:17:31.98:0,32,574	0/0:32,0:32:75.14:0,75,1351	0/0:35,0:35:99:0,102,2279	0/0:32,0:32:87.20:0,87,1730	0/0:20,0:20:48.10:0,48,734	0/0:24,0:24:66.23:0,66,1483	0/0:22,0:22:57.11:0,57,1010	0/0:16,0:16:36.08:0,36,782	0/0:27,0:27:72.18:0,72,1440	0/0:33,0:33:87.13:0,87,1734	0/0:22,0:22:60.15:0,60,1325	1/1:15,22:36:31.35:2820,31,0	0/0:23,0:23:63.11:0,63,1225	0/0:37,0:37:96.68:0,97,1870	0/0:12,0:12:36.12:0,36,829	0/0:29,0:29:80.96:0,81,1540	0/0:30,0:30:70.40:0,70,1345	0/0:23,0:23:66.19:0,66,1301	0/0:20,0:20:53.19:0,53,1039	0/0:11,0:11:27.08:0,27,572	0/0:33,0:33:79.45:0,79,1674	0/0:18,0:18:42.09:0,42,816	0/0:36,0:36:99:0,108,2316	0/0:29,0:27:76.41:0,76,1535	0/0:9,0:9:27.08:0,27,551
chr10	21542595	.	GA	G	338.16	PASS	AB=1.000;AC=6;AF=0.115;AN=52;BaseQRankSum=2.584;DP=406;FS=0.703;HRun=1;HaplotypeScore=124.4247;InbreedingCoeff=0.2937;MQ=44.02;MQ0=10;MQRankSum=-4.842;QD=5.83;ReadPosRankSum=-1.931;VQSLOD=-0.2113;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:9,0:6:4.28:9,0,4	0/0:8,0:8:18.95:0,19,262	0/0:32,0:11:33.03:0,33,389	0/0:47,1:21:31.57:0,32,506	0/0:25,0:24:49.70:0,50,698	0/0:10,0:9:15.56:0,16,71	0/1:5,0:4:6.93:7,0,19	./.	0/0:16,0:13:14.40:0,14,72	0/0:7,0:7:17.52:0,18,111	0/1:3,0:3:7.36:7,0,12	0/0:10,0:10:5.25:0,5,36	0/0:16,0:13:10.98:0,11,86	0/0:14,0:11:15.12:0,15,62	1/1:9,17:18:27.87:423,28,0	0/0:18,0:18:30.91:0,31,393	0/0:21,0:21:41.77:0,42,770	0/0:7,0:7:3.28:0,3,77	0/0:29,0:29:81.20:0,81,1108	0/0:11,0:11:21.07:0,21,306	0/0:18,0:18:41.76:0,42,606	0/0:19,0:18:35.08:0,35,432	0/0:3,0:3:1.82:0,2,5	0/1:15,0:13:1.33:1,0,30	0/0:6,0:5:0.36:0,0,22	0/0:12,0:10:23.35:0,23,121	0/0:17,0:13:14.47:0,14,72	./.
chr10	21542596	.	AGGGGG	A	2562.43	PASS	AB=0.617;AC=23;AF=0.442;AN=52;BaseQRankSum=10.531;DP=404;FS=1.061;HRun=6;HaplotypeScore=136.6249;InbreedingCoeff=0.5373;MQ=45.60;MQ0=10;MQRankSum=-6.473;QD=18.30;ReadPosRankSum=1.526;VQSLOD=-0.1981;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:2,5:6:13.87:127,0,14	0/0:8,0:8:18.95:0,19,523	0/0:33,0:10:30.09:0,30,657	0/0:49,0:22:49.90:0,50,1127	0/0:22,0:23:42.08:0,42,1498	1/1:2,6:8:21.04:252,21,0	0/0:2,1:4:5.97:0,6,46	./.	0/1:4,11:13:7.80:290,0,8	0/1:3,2:7:72.49:152,0,72	1/1:2,1:3:2.21:27,2,0	1/1:2,7:10:24.07:297,24,0	1/1:4,11:13:27.08:352,27,0	1/1:2,10:11:27.08:344,27,0	0/0:27,0:19:44.15:0,44,580	0/0:17,0:17:27.91:0,28,657	0/0:19,0:22:24.53:0,25,1776	0/1:5,1:7:28.34:49,0,28	0/0:29,0:29:81.26:0,81,2313	0/0:11,0:11:21.07:0,21,677	0/0:18,0:18:44.99:0,45,1298	0/0:19,0:18:21.10:0,21,895	1/1:2,1:3:3.01:39,3,0	0/1:2,9:13:38.80:92,0,39	1/1:2,1:4:9.49:101,9,0	1/1:5,5:8:15.05:222,15,0	1/1:1,14:12:30.10:410,30,0	./.
chr10	21542603	.	AGGAAG	A	3001.83	PASS	AB=0.752;AC=24;AF=0.444;AN=54;BaseQRankSum=10.458;DP=426;FS=1.574;HRun=0;HaplotypeScore=144.3242;InbreedingCoeff=0.5522;MQ=44.97;MQ0=9;MQRankSum=-5.528;QD=18.76;ReadPosRankSum=0.410;VQSLOD=3.4730;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:6,5:8:50.02:175,0,50	0/0:9,0:9:17.85:0,18,351	0/0:34,0:9:27.05:0,27,581	0/0:47,0:20:39.40:0,39,882	0/0:27,0:26:23.93:0,24,1180	1/1:9,6:13:24.69:309,25,0	0/0:6,1:6:17.97:0,18,294	./.	0/1:4,11:12:53.64:344,0,54	0/1:4,2:6:56.58:164,0,57	1/1:1,1:2:2.98:21,3,0	1/1:6,7:13:21.17:291,21,0	1/1:9,11:17:22.74:420,23,0	1/1:3,10:10:30.03:399,30,0	0/0:24,0:16:39.13:0,39,763	0/0:16,0:16:25.17:0,25,365	0/0:22,0:22:58.83:0,59,1441	0/1:4,1:5:2.98:45,0,3	0/0:29,0:29:77.94:0,78,1888	0/0:13,0:13:24.08:0,24,544	0/0:19,0:19:27.31:0,27,971	0/0:17,0:16:15.23:0,15,678	1/1:3,1:4:2.16:42,2,0	0/1:9,9:16:78.29:165,0,78	1/1:5,1:5:9.11:116,9,0	1/1:6,5:9:15.39:265,15,0	1/1:5,14:15:27.26:439,27,0	0/1:2,0:2:0:0,0,0
chr10	21542656	.	AAGG	A	7237.56	PASS	AB=0.767;AC=30;AF=0.536;AN=56;BaseQRankSum=3.514;DP=524;FS=30.695;HRun=0;HaplotypeScore=127.7041;InbreedingCoeff=0.6573;MQ=43.86;MQ0=21;MQRankSum=-4.178;QD=24.53;ReadPosRankSum=4.977;VQSLOD=2.9854;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,9:12:12.48:298,12,0	0/0:8,0:8:1.61:0,2,87	0/0:36,0:14:41.78:0,42,544	0/0:19,0:7:21.03:0,21,299	0/0:24,0:22:39.13:0,39,627	1/1:8,14:18:53.68:592,54,0	0/1:11,10:15:53.09:330,0,53	0/0:42,0:36:27.84:0,28,130	1/1:11,9:19:30:603,30,0	1/1:7,14:19:2.61:587,3,0	1/1:2,7:9:24.08:350,24,0	1/1:6,17:21:62.47:655,62,0	1/1:11,16:22:65.48:782,65,0	1/1:6,11:14:39.08:524,39,0	0/0:19,0:17:44.24:0,44,302	0/1:16,0:15:60.95:61,0,75	0/0:15,0:15:30.51:0,31,455	0/1:8,5:11:9.41:255,0,9	0/0:21,0:20:17.37:0,17,471	0/0:11,0:11:21.07:0,21,331	0/0:18,0:18:42.87:0,43,552	0/0:16,0:16:35.99:0,36,488	1/1:6,6:11:33:455,33,0	1/1:12,8:19:22.06:417,22,0	1/1:4,11:14:38.99:484,39,0	1/1:8,14:15:36.09:458,36,0	1/1:10,4:10:20.09:269,20,0	0/1:3,3:5:27.98:117,0,28
chr10	21542659	.	G	GAGA	11014.91	PASS	AB=1.000;AC=36;AF=0.643;AN=56;BaseQRankSum=2.943;DP=533;FS=10.833;HRun=0;HaplotypeScore=123.7927;InbreedingCoeff=0.6586;MQ=47.27;MQ0=20;MQRankSum=-5.029;QD=29.06;ReadPosRankSum=2.339;VQSLOD=4.6004;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:15,3:13:35.96:447,36,0	0/0:8,0:8:8.92:0,9,134	0/0:39,0:15:45.07:0,45,631	0/0:24,0:12:27.03:0,27,370	0/1:23,0:21:99:132,0,459	1/1:19,6:21:57.13:947,57,0	1/1:21,1:16:39.62:467,40,0	0/1:24,0:19:36.52:37,0,138	1/1:15,5:20:54.17:943,54,0	1/1:19,1:19:51.11:777,51,0	1/1:8,1:9:24.08:346,24,0	1/1:21,4:23:69.12:1156,69,0	1/1:21,8:24:69.22:1188,69,0	1/1:18,2:17:35.40:628,35,0	0/0:19,0:18:5.79:0,6,274	0/1:18,0:17:18.58:19,0,213	0/0:13,0:13:32.96:0,33,489	1/1:13,3:14:18.77:517,19,0	0/0:22,0:21:41.15:0,41,617	0/0:12,0:12:24.08:0,24,401	0/0:17,0:17:40.53:0,41,578	0/1:16,0:16:99:132,0,407	1/1:11,3:13:36.11:551,36,0	1/1:16,3:19:39.52:601,40,0	1/1:13,2:14:39.13:656,39,0	1/1:20,2:15:45.10:715,45,0	1/1:12,4:12:36.04:545,36,0	1/1:4,2:5:15.05:210,15,0
chr10	21542717	.	T	TG	15915.59	PASS	AB=0.900;AC=37;AF=0.661;AN=56;BaseQRankSum=-1.730;DP=660;FS=17.540;HRun=3;HaplotypeScore=83.7139;InbreedingCoeff=0.9114;MQ=81.44;MQ0=5;MQRankSum=-10.708;QD=34.83;ReadPosRankSum=3.070;VQSLOD=3.3144;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,23:23:60.16:808,60,0	0/0:7,0:7:18.06:0,18,216	0/0:30,0:30:81.22:0,81,958	0/0:28,0:28:69.21:0,69,821	0/0:20,0:20:57.17:0,57,680	1/1:2,33:33:84.28:1167,84,0	1/1:2,17:18:48.16:672,48,0	1/1:0,27:27:81.26:1106,81,0	1/1:2,24:27:69.19:939,69,0	1/1:1,26:27:75.25:1048,75,0	1/1:0,16:16:45.15:629,45,0	1/1:4,21:25:66.21:900,66,0	1/1:8,23:28:66.22:918,66,0	1/1:1,24:24:66.22:916,66,0	1/1:3,24:24:24.19:761,24,0	0/1:8,1:9:17.95:18,0,228	0/0:19,0:19:54.11:0,54,618	1/1:2,11:12:36.12:504,36,0	0/0:24,0:24:69.18:0,69,804	0/0:26,0:26:72.21:0,72,852	0/0:36,0:36:99:0,102,1211	0/0:13,0:13:39.11:0,39,456	1/1:1,25:26:75.25:1049,75,0	1/1:2,27:29:78.26:1088,78,0	1/1:0,21:20:54.18:755,54,0	1/1:4,33:34:99:1386,99,0	1/1:2,31:32:81.27:1125,81,0	1/1:2,3:5:9.03:126,9,0
chr10	21542873	.	T	TTCTCTCTCTC	7079.51	PASS	AB=0.898;AC=44;AF=0.846;AN=52;BaseQRankSum=-2.055;DP=664;FS=0.000;HRun=0;HaplotypeScore=255.0872;InbreedingCoeff=0.4115;MQ=65.57;MQ0=9;MQRankSum=-0.043;QD=12.57;ReadPosRankSum=-0.444;VQSLOD=3.1453;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:29:11.03:83,11,0	1/1:10,0:10:9.44:189,9,0	./.	0/0:33,0:26:3.01:0,3,59	0/1:26,0:25:0:0,0,0	1/1:40,0:39:22.36:449,22,0	1/1:35,0:34:33.54:636,34,0	1/1:47,0:43:22.93:406,23,0	1/1:18,0:18:19.60:311,20,0	1/1:19,0:19:27.07:530,27,0	1/1:22,0:22:17.59:332,18,0	1/1:26,0:25:20.72:464,21,0	1/1:27,0:27:12.30:551,12,0	1/1:25,0:25:2.86:25,3,0	0/0:21,0:21:8.45:0,8,119	0/1:16,8:21:5.45:85,0,5	1/1:15,0:15:6.12:102,6,0	1/1:11,0:11:15.03:255,15,0	1/1:20,0:24:33.11:817,33,0	0/1:17,0:21:0:0,0,0	./.	1/1:14,1:14:3.01:74,3,0	1/1:8,0:8:3.01:75,3,0	1/1:28,0:28:6.02:114,6,0	1/1:24,0:24:18.04:346,18,0	0/1:32,0:32:0.38:753,0,0	1/1:27,0:27:20.81:335,21,0	1/1:8,0:7:11.69:149,12,0
chr10	21542906	.	TCACACACACACACACACACACACA	T	5182.39	PASS	AB=0.719;AC=12;AF=0.231;AN=52;BaseQRankSum=4.073;DP=497;FS=36.866;HRun=0;HaplotypeScore=255.9477;InbreedingCoeff=-0.2019;MQ=40.18;MQ0=17;MQRankSum=-1.391;QD=23.66;ReadPosRankSum=2.040;VQSLOD=2.6402;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:18,0:30:41.85:581,0,42	0/0:10,0:10:5.99:0,6,302	./.	./.	0/0:19,0:18:12.51:0,13,1225	1/1:20,4:28:0.38:171,0,0	0/0:20,0:23:8.75:0,9,51	0/0:28,0:23:39.13:0,39,1137	0/1:6,1:10:53.18:521,0,53	0/1:10,7:17:50.99:549,0,51	0/0:13,2:15:2.91:0,3,20	0/1:11,7:21:50.62:282,0,51	0/1:18,3:23:99:172,0,145	0/1:12,2:18:0:0,0,0	0/0:12,0:20:6.49:0,6,333	0/0:26,0:22:27.56:0,28,2340	0/0:17,0:16:14.97:0,15,1085	0/1:9,2:10:99:177,0,263	0/0:20,0:19:33.05:0,33,2044	0/0:17,0:14:5.78:0,6,594	0/0:6,0:5:3.01:0,3,184	0/0:13,0:15:0.61:0,1,14	0/0:3,0:4:2.90:0,3,16	0/0:13,3:15:2.96:0,3,19	0/0:16,6:23:10.49:0,10,57	0/1:16,4:27:99:1256,0,179	0/1:6,1:19:88.01:827,0,88	0/1:6,2:8:19.67:647,0,20
chr10	21543126	.	G	GTT	25225.56	PASS	AB=0.538;AC=35;AF=0.625;AN=56;BaseQRankSum=-14.193;DP=735;FS=0.000;HRun=1;HaplotypeScore=79.6114;InbreedingCoeff=0.9238;MQ=86.05;MQ0=1;MQRankSum=-7.054;QD=51.17;ReadPosRankSum=0.965;VQSLOD=4.6366;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,31:33:93.23:1720,93,0	0/0:17,0:17:51.16:0,51,760	0/0:22,0:22:51.72:0,52,841	0/0:33,0:33:87.18:0,87,1237	0/0:31,0:31:93.32:0,93,1422	1/1:0,25:25:69.24:1332,69,0	1/1:1,24:25:72.20:1353,72,0	1/1:3,47:50:99:2875,151,0	1/1:1,23:24:60.21:1159,60,0	1/1:1,32:35:99:1940,105,0	1/1:1,21:22:63.13:1140,63,0	1/1:2,21:23:66.23:1261,66,0	1/1:1,22:24:54.19:1033,54,0	1/1:0,29:30:72.20:1348,72,0	1/1:0,35:36:93.32:1790,93,0	0/0:32,1:33:41.53:0,42,1410	0/0:15,0:15:45.15:0,45,689	0/1:2,12:14:52.80:560,0,53	0/0:15,0:15:45.14:0,45,664	0/0:25,0:25:75.25:0,75,1148	0/0:31,0:31:90.31:0,90,1378	0/0:20,0:20:60.19:0,60,898	1/1:1,16:17:51.13:947,51,0	1/1:0,40:40:99:2028,105,0	1/1:1,31:32:84.29:1623,84,0	1/1:2,23:25:66.21:1209,66,0	1/1:1,22:25:66.23:1271,66,0	1/1:0,12:12:33.11:637,33,0
chr10	21544653	.	A	AT	10357.18	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-12.251;DP=597;FS=0.366;HRun=10;HaplotypeScore=54.6345;InbreedingCoeff=0.9869;MQ=70.09;MQ0=0;MQRankSum=-1.480;QD=24.26;ReadPosRankSum=0.438;VQSLOD=5.3347;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,25:29:63.63:672,64,0	0/0:5,0:5:8.98:0,9,74	0/0:16,0:16:21.84:0,22,216	0/0:7,0:8:16.97:0,17,123	0/0:26,0:26:62.83:0,63,510	1/1:3,26:29:69.17:736,69,0	1/1:3,24:27:60.15:640,60,0	1/1:5,28:33:37.95:807,38,0	1/1:3,18:21:54.14:576,54,0	1/1:4,23:27:66.15:695,66,0	1/1:6,19:25:59.90:598,60,0	1/1:1,16:18:47.99:494,48,0	1/1:4,23:28:53.42:754,53,0	1/1:2,19:21:48.12:512,48,0	1/1:4,24:29:29.07:701,29,0	0/0:20,0:21:49.97:0,50,400	0/0:23,0:23:56.91:0,57,468	1/1:1,10:11:21.05:224,21,0	0/0:12,0:13:29:0,29,227	0/0:29,0:31:66.98:0,67,529	0/0:7,0:7:17.97:0,18,148	0/0:19,0:19:47.94:0,48,394	1/1:7,17:24:47.95:494,48,0	1/1:0,13:13:30.08:320,30,0	1/1:7,23:31:66:686,66,0	1/1:9,23:31:28.85:700,29,0	1/1:2,14:17:41.94:430,42,0	1/1:0,12:12:30.07:319,30,0
chr10	21545211	.	TG	T	15187.20	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=17.531;DP=724;FS=3.106;HRun=1;HaplotypeScore=69.4158;InbreedingCoeff=0.9985;MQ=76.59;MQ0=0;MQRankSum=-2.482;QD=38.16;ReadPosRankSum=7.505;VQSLOD=4.5959;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,36:36:90.30:1258,90,0	0/0:12,0:12:36.10:0,36,529	0/0:16,0:16:41.15:0,41,584	0/0:11,0:11:22.79:0,23,343	0/0:32,0:32:96.31:0,96,1503	1/1:0,33:33:87.29:1216,87,0	1/1:0,17:17:42.14:587,42,0	0/0:42,0:42:99:0,123,1876	1/1:0,21:21:48.16:671,48,0	1/1:0,30:30:87.26:1179,87,0	1/1:0,23:23:63.17:859,63,0	1/1:0,24:24:66.22:923,66,0	1/1:0,34:34:96.32:1342,96,0	1/1:0,24:24:72.24:1007,72,0	0/0:23,0:23:69.22:0,69,1076	0/0:24,0:24:72.23:0,72,1127	0/0:48,0:48:99:0,138,2156	1/1:0,31:31:87.29:1216,87,0	0/0:22,0:22:66.18:0,66,964	0/0:38,0:38:99:0,114,1770	0/0:25,0:25:75.24:0,75,1174	0/0:33,0:33:99:0,99,1552	1/1:0,27:27:72.20:985,72,0	1/1:0,18:18:54.18:755,54,0	1/1:0,21:21:57.19:797,57,0	1/1:1,26:27:78.26:1091,78,0	1/1:0,26:26:75.25:1049,75,0	1/1:0,6:6:18.06:252,18,0
chr10	21545572	.	AGGAGTACTTACTG	A	1462.61	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.210;DP=622;FS=1.025;HRun=0;HaplotypeScore=219.7061;InbreedingCoeff=0.9411;MQ=87.44;MQ0=0;MQRankSum=-6.246;QD=86.04;ReadPosRankSum=0.240;VQSLOD=3.1364;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,111,6593	0/0:3,0:3:9.03:0,9,569	0/0:26,0:26:66.23:0,66,3430	0/0:21,0:21:42.76:0,43,3284	0/0:25,0:25:72.25:0,72,4438	0/0:21,0:21:57.20:0,57,3478	0/0:19,0:19:54.19:0,54,3468	0/0:32,0:32:93.31:0,93,5636	0/0:24,0:24:72.25:0,72,4235	0/0:26,0:26:75.26:0,75,4482	0/0:23,0:23:66.21:0,66,3857	0/0:28,0:28:84.29:0,84,5387	0/0:23,0:23:60.21:0,60,3414	0/0:23,0:23:63.22:0,63,4123	1/1:0,17:17:39.13:1557,39,0	0/0:29,0:29:78.27:0,78,5086	0/0:29,0:29:84.29:0,84,5533	0/0:11,0:11:30.08:0,30,1804	0/0:26,0:26:72.25:0,72,4053	0/0:24,0:24:66.23:0,66,4263	0/0:25,0:25:72.23:0,72,4033	0/0:18,0:18:51.18:0,51,3169	0/0:14,0:14:42.14:0,42,2626	0/0:17,0:17:51.17:0,51,3063	0/0:17,0:17:51.16:0,51,3161	0/0:22,0:22:66.22:0,66,3757	0/0:33,0:32:93.32:0,93,5387	0/0:8,0:8:21.07:0,21,1385
chr10	21545816	.	AACACAC	A	2704.49	PASS	AB=0.724;AC=41;AF=0.854;AN=48;BaseQRankSum=0.299;DP=381;FS=0.000;HRun=0;HaplotypeScore=84.6654;InbreedingCoeff=0.2972;MQ=59.76;MQ0=22;MQRankSum=-5.230;QD=9.11;ReadPosRankSum=-0.554;VQSLOD=1.3846;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:23:5.48:52,5,0	1/1:1,0:2:6.02:84,6,0	./.	./.	0/0:4,0:11:12.04:0,12,167	1/1:3,7:11:14.28:304,14,0	1/1:8,2:9:2.92:20,3,0	0/1:18,0:19:0:0,0,0	1/1:5,7:12:14.90:219,15,0	./.	1/1:5,4:9:8.96:140,9,0	1/1:10,6:16:3.31:21,3,0	1/1:2,10:12:12.02:243,12,0	1/1:5,8:13:14.92:278,15,0	0/1:4,1:12:40.73:41,0,215	1/1:4,0:11:6.02:84,6,0	1/1:6,0:8:3.01:42,3,0	1/1:13,1:14:3.01:61,3,0	./.	1/1:3,0:12:19.62:255,20,0	1/1:26,0:22:3.01:42,3,0	0/0:3,0:9:11.01:0,11,161	1/1:7,3:11:3.01:61,3,0	0/1:15,8:24:9.03:14,0,9	1/1:5,0:5:6.02:119,6,0	1/1:6,4:10:9.03:183,9,0	1/1:7,13:20:18.06:347,18,0	1/1:2,4:6:12.04:221,12,0
chr10	21545911	.	AAT	A	676.36	PASS	AB=0.625;AC=25;AF=0.781;AN=32;BaseQRankSum=2.829;DP=236;FS=7.748;HRun=0;HaplotypeScore=48.8684;InbreedingCoeff=0.3640;MQ=99.41;MQ0=9;MQRankSum=0.447;QD=6.32;ReadPosRankSum=1.719;VQSLOD=1.5808;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,0:10:5.68:28,6,0	./.	0/0:25,0:19:0:0,0,0	./.	1/1:6,0:7:2.84:14,3,0	1/1:9,0:11:5.68:28,6,0	1/1:3,0:5:2.84:14,3,0	0/0:13,0:13:15.03:0,15,167	1/1:5,0:7:5.68:28,6,0	./.	1/1:2,2:4:3.01:33,3,0	./.	./.	1/1:6,2:8:9.02:98,9,0	./.	./.	0/0:10,0:11:17.01:0,17,148	1/1:7,3:10:9.02:99,9,0	./.	./.	./.	./.	1/1:3,1:4:3.01:33,3,0	1/1:9,2:12:5.85:47,6,0	1/1:5,1:6:3.01:33,3,0	./.	1/1:3,4:7:12.03:132,12,0	0/1:6,7:15:7.71:200,0,8
chr10	21549702	.	TG	T	212.16	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.874;DP=571;FS=10.447;HRun=5;HaplotypeScore=58.1016;InbreedingCoeff=0.9981;MQ=76.82;MQ0=0;MQRankSum=-0.491;QD=17.68;ReadPosRankSum=1.573;VQSLOD=2.2940;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:90.30:0,90,1229	0/0:16,0:16:45.15:0,45,608	0/0:17,0:17:47.61:0,48,580	0/0:19,0:18:47.95:0,48,574	0/0:32,0:32:96.32:0,96,1309	0/0:34,0:34:96.32:0,96,1313	0/0:22,0:22:57.19:0,57,780	0/0:37,0:37:96.30:0,96,1271	0/0:17,0:17:51.17:0,51,697	0/0:23,0:23:60.16:0,60,800	0/0:18,0:18:54.17:0,54,722	0/0:19,0:19:51.17:0,51,695	0/0:19,0:19:54.18:0,54,737	0/0:21,0:21:57.18:0,57,763	1/1:1,11:12:27.08:306,27,0	0/0:15,0:15:39.13:0,39,533	0/0:16,0:16:39.13:0,39,533	0/0:23,0:23:69.23:0,69,941	0/0:18,0:18:48.16:0,48,653	0/0:22,0:22:57.19:0,57,780	0/0:11,0:11:30.08:0,30,393	0/0:13,0:13:39.13:0,39,532	0/0:17,0:17:48.16:0,48,655	0/0:13,0:13:36.12:0,36,493	0/0:18,0:18:51.16:0,51,684	0/0:20,0:20:60.20:0,60,821	0/0:33,0:33:93.27:0,93,1247	0/0:15,0:15:42.14:0,42,575
chr10	21549915	.	A	AGGCGGGAAGG	39230.04	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=3.025;DP=600;FS=8.809;HRun=0;HaplotypeScore=255.1773;InbreedingCoeff=0.9203;MQ=77.32;MQ0=0;MQRankSum=-10.057;QD=70.56;ReadPosRankSum=0.733;VQSLOD=3.0858;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:28,9:37:90.08:2963,90,0	1/1:1,4:6:6.02:315,6,0	0/0:19,0:19:45.13:0,45,1211	0/0:25,0:25:62.99:0,63,1717	1/1:4,3:16:17.85:370,18,0	1/1:13,5:18:54.18:1560,54,0	1/1:22,4:26:69.12:2300,69,0	1/1:9,11:28:72.21:2174,72,0	1/1:20,7:27:60.20:2249,60,0	1/1:11,4:15:42.09:1224,42,0	1/1:10,1:11:17.96:406,18,0	1/1:27,7:34:96.15:2579,96,0	1/1:9,6:15:42.10:1419,42,0	1/1:24,6:30:78.26:2145,78,0	1/1:5,7:17:27.09:1222,27,0	1/1:7,18:28:54.19:2580,54,0	1/1:5,23:32:43.63:1947,44,0	1/1:11,7:18:51.13:1736,51,0	1/1:6,4:20:48.12:1320,48,0	1/1:5,8:14:23.92:1100,24,0	1/1:7,11:27:21.02:674,21,0	1/1:3,6:17:20.96:629,21,0	1/1:12,4:16:24.03:779,24,0	1/1:15,6:21:30.51:761,31,0	1/1:19,6:25:63.15:1666,63,0	1/1:27,4:31:84.24:2395,84,0	1/1:19,4:23:66.22:2209,66,0	1/1:1,3:4:12.04:510,12,0
chr10	21549923	.	GTATC	G	9284.91	PASS	AB=0.952;AC=33;AF=0.589;AN=56;BaseQRankSum=7.595;DP=432;FS=30.504;HRun=0;HaplotypeScore=172.7237;InbreedingCoeff=0.8730;MQ=90.73;MQ0=0;MQRankSum=-12.615;QD=39.18;ReadPosRankSum=3.792;VQSLOD=3.4427;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,26:26:58:1001,58,0	0/0:5,0:5:6.02:0,6,159	0/0:19,0:19:57.19:0,57,1408	0/0:28,0:28:37.38:0,37,1675	0/0:8,0:8:14.13:0,14,359	1/1:0,10:10:27.09:478,27,0	1/1:0,15:16:36.12:630,36,0	0/0:26,0:26:70.81:0,71,1943	1/1:0,15:15:35.67:624,36,0	1/1:1,9:10:30.10:491,30,0	1/1:0,8:8:14.08:210,14,0	1/1:1,21:22:58.57:988,59,0	1/1:0,9:9:27.09:462,27,0	1/1:0,17:17:45.15:775,45,0	0/0:13,0:13:14.64:0,15,473	0/1:19,1:20:17.48:17,0,865	0/0:29,0:29:37.79:0,38,1047	1/1:2,12:14:33.11:605,33,0	0/0:18,0:18:54.19:0,54,1411	0/0:11,0:11:4.35:0,4,461	0/0:28,0:28:22.13:0,22,517	0/0:10,0:10:11.98:0,12,337	1/1:0,7:7:18.06:321,18,0	1/1:0,17:17:25.24:383,25,0	1/1:0,11:11:31.92:535,32,0	1/1:1,18:19:54.19:993,54,0	1/1:0,11:11:31.35:553,31,0	1/1:0,5:5:12.04:218,12,0
chr10	21550600	.	AAAAAAAGAAAAG	A	796.61	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=2.664;DP=413;FS=8.847;HRun=0;HaplotypeScore=117.5909;InbreedingCoeff=0.8337;MQ=44.57;MQ0=65;MQRankSum=-3.566;QD=41.93;ReadPosRankSum=0.890;VQSLOD=2.9357;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:13:21.07:0,21,830	0/0:15,0:15:36.12:0,36,1888	0/0:16,0:5:11.91:0,12,213	0/0:29,0:6:11.71:0,12,326	1/1:6,6:9:17.80:500,18,0	0/0:16,0:12:21.07:0,21,817	0/0:16,0:9:18:0,18,575	0/0:11,0:6:12.51:0,13,502	0/0:6,0:6:12.04:0,12,516	0/0:14,0:13:38.16:0,38,1491	0/0:18,0:15:24.08:0,24,733	0/0:15,0:12:18.06:0,18,700	0/0:9,0:7:15.05:0,15,384	0/0:9,0:7:18.06:0,18,708	0/0:13,0:12:24.08:0,24,1262	0/0:12,0:12:17.41:0,17,677	0/0:25,0:23:30.56:0,31,1009	0/0:15,0:12:33.05:0,33,1003	0/0:19,0:12:21.04:0,21,772	0/0:17,0:14:33.04:0,33,1362	0/0:10,0:7:15.05:0,15,639	1/1:2,5:7:12.04:411,12,0	0/0:14,0:11:27.09:0,27,781	0/0:12,0:7:9.03:0,9,316	0/0:13,0:11:30.10:0,30,1084	0/0:23,0:21:48.11:0,48,1681	0/0:21,0:19:42.60:0,43,1540	0/0:6,0:5:9.03:0,9,400
chr10	21550612	.	GA	G	2274.72	PASS	AB=0.846;AC=33;AF=0.589;AN=56;BaseQRankSum=-2.715;DP=462;FS=22.915;HRun=8;HaplotypeScore=73.3842;InbreedingCoeff=0.6430;MQ=55.36;MQ0=82;MQRankSum=-3.989;QD=7.93;ReadPosRankSum=-0.885;VQSLOD=0.0991;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,14:11:17.77:156,18,0	0/0:15,0:16:35.40:0,35,374	0/1:44,0:11:23.17:23,0,61	0/0:44,0:15:12.94:0,13,123	0/0:22,0:19:0.53:0,1,62	1/1:11,8:15:22.59:181,23,0	1/1:7,4:7:11.20:85,11,0	0/0:19,0:8:13.49:0,13,117	1/1:5,1:5:7.66:48,8,0	1/1:6,8:13:20.13:213,20,0	1/1:5,14:15:8.33:161,8,0	1/1:7,8:12:23.07:208,23,0	0/1:6,4:8:18.63:20,0,19	1/1:8,5:11:8.79:118,9,0	0/0:11,0:10:21:0,21,235	0/0:9,0:9:8.62:0,9,100	0/0:18,0:14:15.51:0,16,172	0/1:11,3:11:11.16:69,0,11	0/0:15,0:8:20.58:0,21,196	0/0:12,0:10:21.02:0,21,235	0/0:8,0:5:12:0,12,129	1/1:6,0:5:1.29:10,1,0	1/1:7,8:12:14.94:143,15,0	1/1:4,5:4:6.01:58,6,0	1/1:11,8:17:22.21:217,22,0	1/1:9,11:18:37.81:328,38,0	1/1:10,12:20:28.62:296,29,0	1/1:0,11:10:15.02:144,15,0
chr10	21550623	.	T	TA	1260.82	PASS	AB=0.793;AC=36;AF=0.667;AN=54;BaseQRankSum=-1.700;DP=495;FS=3.777;HRun=15;HaplotypeScore=77.5034;InbreedingCoeff=-0.0287;MQ=57.47;MQ0=93;MQRankSum=-1.819;QD=3.11;ReadPosRankSum=-0.397;VQSLOD=0.2646;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:15,3:8:5.99:50,6,0	1/1:8,9:17:20.05:234,20,0	0/0:52,0:13:11.53:0,12,57	0/1:49,0:17:14.83:15,0,27	1/1:11,11:23:4.93:51,5,0	0/1:17,3:15:15.50:76,0,15	0/1:4,6:7:6.02:63,0,6	0/0:16,0:7:13.35:0,13,73	1/1:2,4:5:6.99:41,7,0	0/1:15,4:18:35.55:63,0,36	0/1:16,4:18:0.86:20,0,1	1/1:13,1:12:10.68:66,11,0	0/1:8,5:11:7.21:38,0,7	0/1:6,7:13:4.36:44,0,4	0/0:11,0:10:8.77:0,9,53	1/1:2,7:9:5.99:50,6,0	1/1:8,11:15:1.09:63,1,0	0/1:8,2:8:9.41:31,0,9	0/1:10,8:9:6.43:79,0,6	0/1:8,5:11:11.13:20,0,11	0/1:6,2:3:0:0,0,0	1/1:5,3:7:3:25,3,0	1/1:10,4:11:3:25,3,0	./.	1/1:10,8:16:5.67:119,6,0	0/1:20,2:21:15.08:117,0,15	1/1:18,5:22:10.04:97,10,0	1/1:8,2:9:3:25,3,0
chr10	21552629	.	GTCTCTCTCTCTCTC	G	3548.05	PASS	AB=0.854;AC=17;AF=0.315;AN=54;BaseQRankSum=0.173;DP=480;FS=2.347;HRun=0;HaplotypeScore=186.7217;InbreedingCoeff=-0.2734;MQ=62.73;MQ0=13;MQRankSum=0.384;QD=12.90;ReadPosRankSum=4.643;VQSLOD=2.5766;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:19,0:17:10.41:66,0,10	0/0:4,0:5:12.04:0,12,315	0/0:31,0:16:0.27:0,0,1	0/0:50,0:24:6.02:0,6,82	0/0:2,0:12:5.20:0,5,68	0/1:19,7:25:59.60:809,0,60	0/1:24,1:23:99:222,0,126	0/0:32,0:32:27.98:0,28,698	0/1:7,0:11:46.41:46,0,169	0/1:16,0:16:35.81:36,0,126	0/1:18,0:20:0.34:0,0,44	0/1:9,2:10:93.24:222,0,93	0/1:10,1:11:10.03:311,0,10	0/1:9,3:12:7.53:385,0,8	0/0:8,0:12:14.84:0,15,173	0/1:8,0:10:5.60:6,0,148	0/0:9,0:10:6.49:0,6,123	0/0:2,0:2:3.01:0,3,46	0/0:13,0:13:8.24:0,8,201	0/0:11,0:11:3.01:0,3,40	0/0:19,0:19:9.02:0,9,143	./.	0/1:21,2:23:6.08:401,0,6	1/1:10,1:12:9.03:230,9,0	0/1:21,3:25:11.98:127,0,12	0/1:19,2:17:99:359,0,254	0/1:15,1:16:78.26:218,0,78	0/1:5,5:9:63.49:109,0,63
chr10	21552631	.	C	CAAG	205.46	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=4.810;DP=505;FS=3.756;HRun=0;HaplotypeScore=176.7657;InbreedingCoeff=0.8798;MQ=59.44;MQ0=14;MQRankSum=-4.038;QD=8.93;ReadPosRankSum=-3.617;VQSLOD=2.5800;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:17:23.15:0,23,346	0/0:5,0:5:15.04:0,15,241	0/0:31,0:16:44.60:0,45,665	0/0:48,0:22:24.30:0,24,708	1/1:5,8:14:27.20:210,27,0	0/0:27,0:26:35.86:0,36,466	0/0:26,0:24:46.10:0,46,697	0/0:37,0:37:89.04:0,89,1219	0/0:11,0:11:13.71:0,14,270	0/0:19,0:17:44.65:0,45,706	0/0:22,0:22:26.83:0,27,493	0/0:11,0:10:17.84:0,18,215	0/0:13,0:13:28.03:0,28,347	0/0:14,0:14:19.61:0,20,261	0/0:12,0:12:30.10:0,30,496	0/0:10,0:9:24.05:0,24,333	0/0:11,0:11:18.06:0,18,307	0/0:2,0:2:5.05:0,5,61	0/0:16,0:16:35.29:0,35,552	0/0:10,0:10:24.08:0,24,437	0/0:19,0:19:36.12:0,36,654	1/1:3,5:9:11.93:112,12,0	0/0:28,0:26:42.25:0,42,666	0/0:12,0:12:27.09:0,27,463	0/0:26,0:25:28:0,28,467	0/0:21,0:17:42.27:0,42,547	0/0:18,0:17:33.96:0,34,501	0/0:14,0:12:13.44:0,13,152
chr10	21552714	.	TGTC	T	413.46	PASS	AB=0.903;AC=8;AF=0.143;AN=56;BaseQRankSum=7.432;DP=488;FS=2.669;HRun=0;HaplotypeScore=185.4712;InbreedingCoeff=-0.0912;MQ=90.85;MQ0=17;MQRankSum=-0.741;QD=2.11;ReadPosRankSum=0.771;VQSLOD=2.6287;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:10:15.47:0,15,368	0/0:2,0:2:6.02:0,6,148	0/0:73,0:45:3.65:0,4,1007	0/1:91,1:51:44.19:44,0,1087	0/0:8,0:8:21.07:0,21,517	0/1:19,4:22:92.27:92,0,441	0/0:13,0:12:24.07:0,24,528	0/0:18,0:18:51.17:0,51,1189	0/0:17,0:15:42.06:0,42,945	0/0:8,0:6:12.04:0,12,296	0/1:4,0:4:0.05:0,0,0	0/1:11,3:14:99:113,0,341	0/1:10,1:11:10.35:10,0,562	0/0:9,1:9:17.72:0,18,365	0/0:13,0:13:29.76:0,30,735	0/0:13,0:12:36.12:0,36,840	0/0:13,0:13:30.05:0,30,683	0/0:2,0:2:6.02:0,6,147	0/0:12,0:10:30.09:0,30,601	0/0:14,0:14:42.14:0,42,970	0/0:12,0:11:21.03:0,21,515	0/0:6,0:6:14.69:0,15,363	0/0:22,0:22:24.05:0,24,506	0/0:10,2:10:5.35:0,5,147	0/0:11,0:10:8.24:0,8,162	0/1:19,1:16:0.83:1,0,972	0/1:12,7:19:99:210,0,791	0/1:9,0:9:62.97:63,0,390
chr10	21552727	.	TCCCCC	T	2310.01	PASS	AB=0.722;AC=29;AF=0.518;AN=56;BaseQRankSum=5.201;DP=370;FS=0.000;HRun=10;HaplotypeScore=152.5351;InbreedingCoeff=0.7263;MQ=85.49;MQ0=20;MQRankSum=-7.572;QD=13.05;ReadPosRankSum=2.077;VQSLOD=0.1472;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:7,1:9:0:0,0,0	0/0:1,0:1:3.01:0,3,50	0/0:40,0:25:23.45:0,23,528	0/0:63,0:34:28.65:0,29,772	0/0:3,0:7:15.01:0,15,211	1/1:11,3:16:15.01:172,15,0	1/1:2,5:9:8.37:115,8,0	1/1:6,6:14:27.06:438,27,0	1/1:6,1:10:2.99:38,3,0	0/0:4,1:5:0:0,0,0	0/1:1,1:3:0:0,0,0	1/1:8,3:12:18.48:213,18,0	1/1:3,8:11:16.83:261,17,0	1/1:4,3:7:2.99:24,3,0	0/0:8,0:14:32.09:0,32,443	0/0:4,0:9:18.04:0,18,239	0/0:5,0:13:24.08:0,24,381	1/1:1,1:2:6.02:99,6,0	0/0:3,0:6:15.04:0,15,233	0/0:4,0:11:24.07:0,24,394	0/0:6,0:10:12:0,12,164	0/0:4,0:4:5.57:0,6,80	1/1:6,6:15:3:53,3,0	0/1:8,0:8:0.01:1,0,0	1/1:6,3:10:3.47:57,3,0	1/1:6,6:12:30.77:448,31,0	1/1:8,6:16:19.21:381,19,0	1/1:5,2:9:12.65:198,13,0
chr10	21552731	.	C	CG	490.03	PASS	AB=0.860;AC=26;AF=0.464;AN=56;BaseQRankSum=3.427;DP=339;FS=16.157;HRun=0;HaplotypeScore=139.0393;InbreedingCoeff=0.4210;MQ=87.37;MQ0=21;MQRankSum=-5.277;QD=3.14;ReadPosRankSum=2.667;VQSLOD=2.5986;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:4,4:6:0:0,0,0	0/0:2,0:1:2.94:0,3,18	0/0:35,0:23:33.32:0,33,309	0/0:57,0:28:45.24:0,45,383	0/1:8,0:7:6.39:6,0,64	0/1:12,3:14:4.66:18,0,5	1/1:8,1:8:8.82:55,9,0	0/0:13,0:13:30.46:0,30,171	1/1:7,0:5:2.97:22,3,0	1/1:5,0:3:3:28,3,0	0/1:2,1:3:0:0,0,0	0/1:9,3:12:4.65:57,0,5	1/1:9,1:10:17.24:105,17,0	1/1:5,2:7:2.77:23,3,0	0/0:13,0:13:33.36:0,33,220	0/0:9,0:8:17.80:0,18,123	0/0:15,0:13:29.26:0,29,197	1/1:1,1:2:5.90:40,6,0	0/0:8,0:6:17.77:0,18,126	0/0:11,0:11:26.74:0,27,185	0/0:12,0:11:17.85:0,18,128	0/0:7,0:7:5.15:0,5,45	1/1:10,3:13:2.25:15,2,0	0/1:6,0:4:0.48:0,0,1	1/1:5,6:10:3:31,3,0	1/1:11,4:11:21.17:165,21,0	0/1:15,1:16:24.47:50,0,24	0/1:7,1:8:25.46:41,0,25
chr10	21552736	.	C	CTCT	3032.82	PASS	AB=1.000;AC=41;AF=0.732;AN=56;BaseQRankSum=3.333;DP=373;FS=13.325;HRun=0;HaplotypeScore=162.5648;InbreedingCoeff=0.3298;MQ=82.50;MQ0=21;MQRankSum=-6.768;QD=11.62;ReadPosRankSum=2.943;VQSLOD=2.6741;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:11,0:8:0:0,0,0	1/1:2,0:1:3:26,3,0	0/0:41,0:27:30.66:0,31,276	0/0:51,0:25:29.71:0,30,307	0/1:7,0:6:27.74:28,0,112	1/1:19,0:18:15.02:202,15,0	1/1:10,0:9:8.74:60,9,0	1/1:15,0:15:40.07:331,40,0	1/1:8,0:7:3:29,3,0	1/1:6,0:4:5.97:50,6,0	0/1:7,0:7:0.47:0,0,1	1/1:13,0:13:14.25:181,14,0	1/1:11,0:11:23.78:225,24,0	1/1:11,0:10:5.62:72,6,0	1/1:9,4:14:34.92:631,35,0	0/1:8,0:7:33.81:34,0,83	0/1:12,0:10:30.95:31,0,88	1/1:2,0:2:5.91:51,6,0	0/1:9,0:7:8.13:8,0,136	0/0:10,0:10:21.46:0,21,227	0/0:8,0:8:9:0,9,97	0/1:8,0:8:17.03:17,0,63	1/1:16,0:16:2.04:18,2,0	1/1:6,0:4:0.35:1,0,0	1/1:13,0:12:2.06:33,2,0	1/1:17,0:13:38.69:385,39,0	1/1:23,0:23:48.05:522,48,0	1/1:12,0:11:17.81:263,18,0
chr10	21552782	.	CCCCCCA	C	6482.60	PASS	AB=0.972;AC=45;AF=0.865;AN=52;BaseQRankSum=-0.933;DP=331;FS=14.441;HRun=0;HaplotypeScore=119.8978;InbreedingCoeff=0.4210;MQ=70.96;MQ0=1;MQRankSum=-5.526;QD=23.15;ReadPosRankSum=4.801;VQSLOD=3.4361;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,11:14:15.01:278,15,0	1/1:1,0:1:1.82:5,2,0	0/0:20,0:19:27.09:0,27,830	0/0:24,0:21:23.30:0,23,601	./.	1/1:6,14:20:32.98:575,33,0	1/1:3,9:11:10.08:254,10,0	0/1:20,0:20:10.37:10,0,15	1/1:5,12:17:27.09:579,27,0	1/1:1,11:12:27.09:559,27,0	1/1:4,8:12:24.08:516,24,0	1/1:5,9:13:18.06:387,18,0	1/1:2,2:4:6.02:129,6,0	1/1:2,14:16:27.05:535,27,0	1/1:9,0:9:7.04:22,7,0	0/1:10,1:11:21.38:72,0,21	0/1:9,0:9:6.59:7,0,10	1/1:1,4:5:8.99:149,9,0	1/1:15,0:15:15.51:57,16,0	1/1:6,0:6:3.63:10,4,0	1/1:4,0:4:1.33:5,1,0	./.	1/1:3,12:15:21.49:406,21,0	1/1:6,4:10:4.41:126,4,0	1/1:0,9:9:15.01:278,15,0	1/1:5,9:13:24.08:516,24,0	1/1:6,18:23:39.05:749,39,0	1/1:2,5:7:12.03:258,12,0
chr10	21552784	.	CCCCA	C	4987.47	PASS	AB=1.000;AC=40;AF=0.741;AN=54;BaseQRankSum=1.639;DP=313;FS=5.440;HRun=0;HaplotypeScore=102.0618;InbreedingCoeff=-0.0243;MQ=72.54;MQ0=1;MQRankSum=-5.754;QD=18.68;ReadPosRankSum=4.647;VQSLOD=4.2113;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:14,0:14:15.18:120,0,15	1/1:0,1:1:3.01:54,3,0	0/0:23,0:20:44.85:0,45,821	0/0:22,0:19:25.89:0,26,504	./.	0/1:19,0:19:30.93:254,0,31	1/1:9,0:8:12.02:117,12,0	1/1:4,15:19:42.04:584,42,0	0/1:16,0:16:29.92:232,0,30	0/1:12,0:12:15.78:225,0,16	1/1:12,0:12:24.05:236,24,0	0/1:13,0:12:8.01:154,0,8	0/1:3,0:3:21.54:50,0,22	1/1:16,0:16:19.71:246,20,0	1/1:1,8:9:21.03:338,21,0	1/1:1,10:11:24.01:343,24,0	1/1:4,5:9:18.02:257,18,0	0/1:5,0:5:21.20:67,0,21	1/1:5,9:14:30.06:476,30,0	1/1:3,3:6:6.02:109,6,0	1/1:0,4:4:5.94:73,6,0	1/1:1,0:1:3:27,3,0	0/1:15,0:15:8.39:172,0,8	1/1:8,0:8:5.58:59,6,0	1/1:9,0:9:14.99:138,15,0	0/1:13,0:12:24.50:206,0,24	1/1:22,0:21:8.84:332,9,0	0/1:7,0:7:15.77:118,0,16
chr10	21552787	.	CA	C	2067.19	PASS	AB=1.000;AC=45;AF=0.833;AN=54;BaseQRankSum=4.109;DP=296;FS=6.978;HRun=1;HaplotypeScore=91.7287;InbreedingCoeff=0.2825;MQ=66.51;MQ0=0;MQRankSum=-5.504;QD=7.98;ReadPosRankSum=3.747;VQSLOD=1.0226;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:14,0:14:1.01:49,0,1	1/1:1,0:1:2.92:17,3,0	0/0:20,0:18:46.91:0,47,514	0/0:15,1:14:19.92:0,20,244	./.	1/1:17,0:17:9.57:132,10,0	1/1:9,0:8:11.07:48,11,0	1/1:16,1:17:40:241,40,0	0/1:15,0:15:0.20:74,0,0	1/1:12,0:12:18.25:120,18,0	1/1:10,1:11:21.89:93,22,0	1/1:10,2:11:19.39:78,19,0	1/1:5,0:5:1.52:61,2,0	1/1:14,1:15:25.81:114,26,0	1/1:9,0:9:20.54:127,21,0	1/1:11,0:11:23.28:136,23,0	1/1:10,0:10:20.65:139,21,0	0/1:6,0:6:14.95:29,0,15	1/1:10,2:12:29.28:176,29,0	1/1:6,0:6:11.83:85,12,0	1/1:4,0:4:5.88:36,6,0	1/1:1,0:1:3:27,3,0	1/1:15,0:15:4.49:71,4,0	1/1:8,0:8:5.96:24,6,0	1/1:9,0:9:13.95:66,14,0	0/1:12,0:11:18.72:66,0,19	1/1:21,0:20:21.19:150,21,0	0/1:7,0:7:2.01:48,0,2
chr10	21552953	.	ACTCAG	A	1240.25	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.456;DP=537;FS=0.854;HRun=0;HaplotypeScore=97.8453;InbreedingCoeff=0.9393;MQ=86.77;MQ0=0;MQRankSum=-3.178;QD=56.38;ReadPosRankSum=2.784;VQSLOD=4.3856;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:90.28:0,90,2833	0/0:3,0:3:9.03:0,9,291	0/0:19,0:19:55.05:0,55,1541	0/0:21,0:21:60.19:0,60,1607	0/0:12,0:12:33.11:0,33,1065	0/0:21,0:21:60.21:0,60,1902	0/0:19,0:19:57.20:0,57,1724	0/0:37,0:36:99:0,108,3265	0/0:17,0:17:51.18:0,51,1597	0/0:13,0:13:33.11:0,33,1066	0/0:7,0:7:21.07:0,21,642	0/0:26,0:26:75.26:0,75,2379	0/0:16,0:16:48.16:0,48,1473	0/0:20,0:20:57.20:0,57,1812	1/1:1,21:22:60.21:1335,60,0	0/0:21,0:21:63.19:0,63,1866	0/0:24,0:24:72.21:0,72,2154	0/0:12,0:12:30.10:0,30,918	0/0:25,0:25:69.24:0,69,2214	0/0:25,0:25:75.25:0,75,2314	0/0:10,0:10:30.10:0,30,969	0/0:14,0:14:36.12:0,36,1076	0/0:28,0:27:75.26:0,75,2419	0/0:21,0:21:63.20:0,63,1950	0/0:21,0:21:60.21:0,60,1912	0/0:25,0:25:75.26:0,75,2422	0/0:15,0:15:45.14:0,45,1379	0/0:9,0:9:27.08:0,27,798
chr10	21553121	.	AT	A	11298.21	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-4.128;DP=526;FS=7.760;HRun=9;HaplotypeScore=56.0429;InbreedingCoeff=0.9145;MQ=75.84;MQ0=1;MQRankSum=-6.347;QD=22.46;ReadPosRankSum=3.372;VQSLOD=5.6373;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,14:14:36.02:329,36,0	1/1:0,5:5:12.01:110,12,0	0/0:10,0:10:8.10:0,8,145	0/0:13,0:13:27.07:0,27,299	1/1:3,23:26:63.02:577,63,0	1/1:5,13:18:36.02:329,36,0	1/1:0,21:21:57.03:522,57,0	1/1:9,24:33:72:655,72,0	1/1:0,17:17:48.03:439,48,0	1/1:4,17:21:48.02:438,48,0	1/1:2,15:17:39.01:357,39,0	1/1:3,15:18:39.02:357,39,0	1/1:1,26:27:75.04:686,75,0	1/1:0,14:14:42.02:384,42,0	1/1:0,26:26:72.04:659,72,0	1/1:2,17:19:42.02:384,42,0	1/1:1,22:23:59.93:549,60,0	1/1:0,10:10:30.02:275,30,0	1/1:3,23:26:66.01:600,66,0	1/1:3,27:30:72.01:658,72,0	1/1:0,8:8:24.01:220,24,0	1/1:1,5:6:9:82,9,0	1/1:5,20:25:54.02:491,54,0	1/1:0,9:9:21.01:192,21,0	1/1:2,16:18:48.03:439,48,0	1/1:3,15:18:45.02:412,45,0	1/1:3,22:24:54.03:494,54,0	1/1:2,27:29:72.04:659,72,0
chr10	21554675	.	AT	A	9626.74	PASS	AB=0.612;AC=51;AF=0.911;AN=56;BaseQRankSum=-2.560;DP=718;FS=2.776;HRun=11;HaplotypeScore=109.4720;InbreedingCoeff=0.8121;MQ=75.67;MQ0=1;MQRankSum=-3.705;QD=14.18;ReadPosRankSum=4.705;VQSLOD=5.0007;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,29:34:74.90:616,75,0	1/1:0,0:9:14.26:41,14,0	0/0:19,0:17:26.64:0,27,250	0/0:20,0:19:20.83:0,21,191	1/1:5,27:32:80.88:665,81,0	1/1:7,25:32:6.17:457,6,0	1/1:5,26:32:67.95:548,68,0	1/1:9,0:37:58.44:183,58,0	1/1:5,27:33:47.95:590,48,0	1/1:8,21:29:62.89:517,63,0	1/1:2,17:19:44.70:356,45,0	1/1:4,24:29:64.95:523,65,0	1/1:6,22:30:60.98:480,61,0	1/1:5,19:24:53.93:443,54,0	1/1:3,0:31:50.92:149,51,0	1/1:4,0:31:52.95:153,53,0	1/1:3,0:30:40.73:118,41,0	1/1:1,10:12:32:252,32,0	1/1:4,0:17:25.99:74,26,0	1/1:1,0:16:26.47:77,26,0	1/1:3,0:21:34.63:100,35,0	1/1:3,20:23:50.92:419,51,0	1/1:0,27:27:68.91:566,69,0	1/1:0,25:25:62.93:517,63,0	1/1:6,23:29:59.91:493,60,0	0/1:11,19:30:1.10:405,0,1	1/1:3,23:26:65.91:542,66,0	1/1:3,17:21:18:343,18,0
chr10	21556625	.	AG	A	838.01	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.433;DP=538;FS=13.365;HRun=1;HaplotypeScore=83.3529;InbreedingCoeff=0.9874;MQ=71.83;MQ0=14;MQRankSum=-0.728;QD=36.44;ReadPosRankSum=0.040;VQSLOD=2.4555;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:63.11:0,63,870	0/0:6,0:6:18.05:0,18,260	0/0:42,0:17:51.08:0,51,709	0/0:31,0:21:63.08:0,63,873	0/0:24,0:24:59.78:0,60,874	0/0:23,0:23:69.18:0,69,988	0/0:23,0:23:62.56:0,63,955	0/0:33,0:33:99:0,99,1539	0/0:20,0:19:57.13:0,57,861	0/0:24,0:24:72.23:0,72,1074	0/0:13,0:13:36.12:0,36,559	0/0:15,0:15:45.13:0,45,660	0/0:14,0:14:42.13:0,42,627	0/0:13,0:13:39.13:0,39,602	1/1:0,23:23:69.19:933,69,0	0/0:14,0:14:42.14:0,42,657	0/0:15,0:14:42.12:0,42,630	0/0:17,0:17:47.48:0,47,678	0/0:13,0:12:36.12:0,36,563	0/0:19,0:19:48.15:0,48,729	0/0:19,0:19:51.17:0,51,784	0/0:18,0:18:54.16:0,54,792	0/0:21,0:21:53.61:0,54,768	0/0:13,0:13:33.11:0,33,515	0/0:21,0:21:63.16:0,63,895	0/0:20,0:20:60.20:0,60,939	0/0:15,0:14:45.14:0,45,667	0/0:7,0:7:21.07:0,21,328
chr10	21556633	.	AGTGTGT	A	349.59	PASS	AB=1.000;AC=5;AF=0.096;AN=52;BaseQRankSum=1.930;DP=573;FS=1.379;HRun=0;HaplotypeScore=135.6473;InbreedingCoeff=0.4933;MQ=63.42;MQ0=32;MQRankSum=-0.885;QD=4.79;ReadPosRankSum=-0.892;VQSLOD=2.6370;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:15.01:0,15,226	0/0:6,0:6:6.02:0,6,106	./.	./.	1/1:15,8:22:3.48:39,3,0	0/0:21,0:21:4.12:0,4,368	0/0:22,0:21:17.98:0,18,351	0/1:32,0:31:38.76:39,0,85	0/0:19,0:18:9.01:0,9,171	0/0:24,0:24:21.07:0,21,400	0/0:13,0:13:11.73:0,12,248	0/0:16,0:16:15.02:0,15,250	0/0:15,0:14:13.18:0,13,301	0/0:13,0:13:15.02:0,15,255	0/0:31,0:28:8.93:0,9,153	0/0:20,0:20:12.98:0,13,302	0/0:17,0:14:12.04:0,12,252	0/0:20,0:17:30.06:0,30,621	0/0:18,0:16:23.28:0,23,478	0/0:22,0:22:21.02:0,21,496	0/0:22,0:21:6.02:0,6,140	1/1:12,4:18:21.07:387,21,0	0/0:21,0:21:20.70:0,21,388	0/0:21,0:19:29.72:0,30,611	0/0:21,0:21:21.07:0,21,482	0/0:25,0:23:42.12:0,42,760	0/0:13,0:12:9.03:0,9,197	0/0:10,0:8:15.05:0,15,368
chr10	21556718	.	GAGAA	G	286.64	PASS	AB=1.000;AC=10;AF=0.179;AN=56;BaseQRankSum=8.400;DP=522;FS=7.841;HRun=0;HaplotypeScore=104.4708;InbreedingCoeff=0.5209;MQ=61.91;MQ0=30;MQRankSum=0.303;QD=2.49;ReadPosRankSum=0.503;VQSLOD=1.4281;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:21:50.42:0,50,358	0/0:7,0:7:17.95:0,18,148	0/0:26,0:13:33.82:0,34,301	0/0:37,0:19:36.90:0,37,343	1/1:10,0:9:6.88:54,7,0	0/0:17,2:17:11.16:0,11,203	0/0:22,0:20:33.98:0,34,360	1/1:20,0:12:16.54:198,17,0	0/0:25,0:25:38.65:0,39,314	0/0:20,0:20:11.39:0,11,337	0/0:18,1:18:29.60:0,30,248	0/1:19,0:19:6.90:7,0,271	0/0:16,2:16:40.72:0,41,290	0/0:12,0:12:20.01:0,20,182	1/1:12,0:10:20.55:146,21,0	0/1:15,0:15:11.51:12,0,242	0/0:17,0:14:19.75:0,20,415	0/0:17,0:16:24.09:0,24,314	0/0:15,0:14:38.54:0,39,380	0/0:15,0:14:33.29:0,33,259	0/0:14,0:13:2.07:0,2,110	0/1:17,0:17:0:0,0,0	0/0:13,0:12:7.36:0,7,178	0/0:31,0:27:44.56:0,45,477	0/0:28,1:28:68.74:0,69,591	0/1:22,0:22:17.14:17,0,357	0/0:19,0:19:20.59:0,21,322	0/0:9,0:7:17.88:0,18,140
chr10	21556720	.	GA	G	391.94	PASS	AC=4;AF=0.074;AN=54;BaseQRankSum=5.145;DP=521;FS=30.544;HRun=2;HaplotypeScore=85.6282;InbreedingCoeff=0.9438;MQ=64.39;MQ0=24;MQRankSum=-1.843;QD=11.88;ReadPosRankSum=-2.829;VQSLOD=0.0913;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:21:49.38:0,49,572	0/0:8,0:8:20.87:0,21,264	0/0:28,0:15:39.12:0,39,504	0/0:37,0:19:41.64:0,42,490	0/0:11,0:10:7.76:0,8,51	0/0:20,0:18:38.63:0,39,458	0/0:24,0:23:62.28:0,62,697	1/1:2,19:13:39.10:455,39,0	0/0:27,0:27:45.13:0,45,581	0/0:19,0:20:56.02:0,56,576	0/0:19,0:19:36.11:0,36,463	0/0:19,0:19:47.63:0,48,530	0/0:19,0:17:43.34:0,43,513	0/0:11,0:11:24.52:0,25,301	1/1:12,0:10:15.96:55,16,0	0/0:16,0:16:46.92:0,47,541	0/0:16,0:14:36.51:0,37,453	0/0:15,0:15:44.77:0,45,515	0/0:12,0:12:36.10:0,36,458	0/0:14,0:13:33.10:0,33,438	0/0:14,0:13:17.66:0,18,188	./.	0/0:11,0:10:26.58:0,27,277	0/0:28,0:25:42.44:0,42,501	0/0:29,0:28:69.04:0,69,843	0/0:21,0:21:55.55:0,56,586	0/0:21,0:21:56.34:0,56,639	0/0:7,0:6:18.06:0,18,239
chr10	21556721	.	AAG	A	232.62	PASS	AB=0.963;AC=5;AF=0.089;AN=56;BaseQRankSum=1.834;DP=518;FS=17.775;HRun=0;HaplotypeScore=92.7360;InbreedingCoeff=0.3729;MQ=66.57;MQ0=21;MQRankSum=-2.679;QD=3.47;ReadPosRankSum=-1.853;VQSLOD=0.5805;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:21:54.03:0,54,732	0/0:8,0:8:21.07:0,21,348	0/0:29,0:16:40.95:0,41,653	0/0:38,0:20:34.79:0,35,623	0/0:11,0:11:7.11:0,7,53	0/0:17,2:18:39.08:0,39,578	0/0:25,0:23:62.72:0,63,890	0/1:19,0:13:0.96:1,0,13	0/0:27,0:27:45.10:0,45,727	0/1:19,0:19:9:9,0,617	0/0:18,0:18:36.12:0,36,605	0/0:17,2:19:46.48:0,46,664	0/0:18,1:17:36.13:0,36,618	0/0:10,1:11:24.55:0,25,395	1/1:9,1:9:20.81:322,21,0	0/0:16,0:16:48.15:0,48,726	0/1:14,2:14:1.53:2,0,444	0/0:15,0:15:42.51:0,43,571	0/0:13,0:13:28.57:0,29,619	0/0:14,0:13:33.11:0,33,518	0/0:11,1:11:21.04:0,21,277	0/0:17,0:17:2.97:0,3,20	0/0:11,0:10:27.02:0,27,378	0/0:26,1:25:45.35:0,45,681	0/0:27,2:28:69.11:0,69,1097	0/0:22,0:22:6.06:0,6,712	0/0:21,0:21:54.50:0,55,827	0/0:7,0:6:18.06:0,18,287
chr10	21558475	.	GGACAGATTA	G	1728.66	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.488;DP=735;FS=2.961;HRun=0;HaplotypeScore=195.8384;InbreedingCoeff=0.9835;MQ=84.76;MQ0=0;MQRankSum=-7.537;QD=72.03;ReadPosRankSum=0.535;VQSLOD=3.7701;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,141,6530	0/0:10,0:10:27.09:0,27,1261	0/0:19,0:19:57.17:0,57,2383	0/0:26,0:26:75.09:0,75,2953	0/0:35,0:35:99:0,102,4507	0/0:28,0:28:81.28:0,81,3815	0/0:37,0:37:99:0,105,4772	0/0:33,0:33:96.32:0,96,4315	0/0:17,0:17:51.14:0,51,2202	0/0:33,0:33:96.33:0,96,4352	0/0:27,0:27:81.28:0,81,3668	0/0:25,0:25:75.26:0,75,3455	0/0:18,0:18:45.14:0,45,1928	0/0:20,0:20:60.21:0,60,2777	1/1:1,23:24:60.21:1824,60,0	0/0:27,0:27:81.28:0,81,3590	0/0:39,0:39:99:0,114,5338	0/0:16,0:16:48.16:0,48,2314	0/0:24,0:24:69.21:0,69,3065	0/0:29,0:29:84.27:0,84,3578	0/0:46,0:46:99:0,135,6050	0/0:26,0:26:72.25:0,72,3310	0/0:21,0:21:60.19:0,60,2683	0/0:22,0:22:66.23:0,66,3096	0/0:24,0:24:72.25:0,72,3258	0/0:31,0:31:93.32:0,93,4317	0/0:26,0:26:78.27:0,78,3455	0/0:5,0:5:15.05:0,15,730
chr10	21558625	.	AT	A	2530.56	PASS	AB=1.000;AC=10;AF=0.179;AN=56;BaseQRankSum=12.223;DP=601;FS=0.404;HRun=8;HaplotypeScore=56.8563;InbreedingCoeff=0.7880;MQ=69.98;MQ0=0;MQRankSum=1.547;QD=19.03;ReadPosRankSum=-1.528;VQSLOD=3.0020;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:63.19:0,63,760	0/0:8,0:8:18.06:0,18,217	0/1:15,0:15:4.45:4,0,254	0/1:6,0:6:12.46:12,0,30	1/1:6,27:32:80.80:753,81,0	0/0:26,0:26:75.20:0,75,874	0/0:28,0:28:75.19:0,75,871	1/1:6,29:35:86.98:798,87,0	0/0:20,0:20:57.13:0,57,652	0/0:25,0:25:66.19:0,66,781	0/0:23,0:23:63.19:0,63,756	0/0:18,0:18:51.16:0,51,616	0/0:17,0:18:51.02:0,51,594	0/0:18,0:18:48.14:0,48,570	1/1:2,20:22:57.08:549,57,0	0/0:28,0:28:78.21:0,78,919	0/0:29,0:29:78.21:0,78,928	0/0:21,0:21:60.18:0,60,724	0/0:15,0:15:39.12:0,39,470	0/0:29,0:29:78.22:0,78,920	0/0:10,0:10:27.04:0,27,291	1/1:2,20:22:60.10:579,60,0	0/0:24,0:24:69.20:0,69,824	0/0:14,0:14:36.11:0,36,434	0/0:26,0:26:75.18:0,75,862	0/0:25,0:25:60.18:0,60,715	0/0:29,0:29:84.25:0,84,1003	0/0:11,0:11:27.08:0,27,326
chr10	21559526	.	G	GCCCAAAAGAATGTGAG	5631.80	PASS	AB=0.842;AC=43;AF=0.935;AN=46;BaseQRankSum=-1.504;DP=75;FS=0.000;HRun=0;HaplotypeScore=65.3642;InbreedingCoeff=-0.1580;MQ=113.81;MQ0=0;MQRankSum=-1.934;QD=77.15;ReadPosRankSum=0.301;VQSLOD=3.8631;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,0:5:3.01:117,3,0	./.	0/1:5,0:5:25.27:564,0,25	0/1:5,1:8:28.77:834,0,29	0/1:3,0:4:0.72:158,0,1	1/1:0,0:1:3.01:69,3,0	1/1:1,0:1:3:25,3,0	1/1:2,0:3:9.03:259,9,0	1/1:2,0:2:6.02:249,6,0	1/1:1,0:1:3:28,3,0	1/1:1,0:3:9.03:234,9,0	1/1:2,0:5:15.05:611,15,0	1/1:2,0:2:6.01:74,6,0	./.	1/1:0,0:2:6.02:94,6,0	1/1:1,0:3:9.02:197,9,0	./.	1/1:0,0:2:6.02:211,6,0	1/1:2,0:2:6.01:116,6,0	1/1:0,0:1:3.01:53,3,0	./.	1/1:4,0:4:12.03:293,12,0	1/1:2,0:3:9.03:352,9,0	1/1:3,0:5:9.02:173,9,0	1/1:0,0:2:6.02:186,6,0	1/1:1,0:2:6.02:183,6,0	./.	1/1:0,0:4:12.04:552,12,0
chr10	21560147	.	TA	T	2963.09	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=4.018;DP=663;FS=4.693;HRun=8;HaplotypeScore=73.6736;InbreedingCoeff=0.9985;MQ=75.84;MQ0=0;MQRankSum=0.099;QD=23.15;ReadPosRankSum=1.258;VQSLOD=4.4400;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:45.05:0,45,511	1/1:1,12:13:36.06:348,36,0	0/0:15,0:15:35.58:0,36,392	0/0:11,0:11:24.07:0,24,276	0/0:43,0:43:99:0,117,1375	0/0:28,0:28:78.22:0,78,923	0/0:11,0:11:30.09:0,30,362	0/0:7,0:32:74.94:0,75,395	0/0:23,0:23:57.13:0,57,673	0/0:30,0:30:84.26:0,84,1012	0/0:32,0:32:84.25:0,84,1005	0/0:27,0:27:78.24:0,78,942	0/0:29,0:29:81.25:0,81,978	0/0:27,0:27:72.22:0,72,870	0/0:18,0:18:54.15:0,54,641	1/1:2,18:20:51.08:493,51,0	1/1:1,21:22:57.09:550,57,0	0/0:21,0:21:63.18:0,63,750	1/1:3,10:13:30.03:284,30,0	1/1:2,33:35:93.14:898,93,0	1/1:2,23:25:60.10:579,60,0	0/0:29,0:29:84.26:0,84,1015	0/0:18,0:18:51.16:0,51,616	0/0:16,0:16:45.14:0,45,544	0/0:31,0:31:81.25:0,81,979	0/0:32,0:32:87.25:0,87,1031	0/0:37,0:37:99:0,105,1235	0/0:10,0:10:21.06:0,21,254
chr10	21560266	.	AG	A	1808.22	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=3.997;DP=736;FS=6.477;HRun=1;HaplotypeScore=90.9947;InbreedingCoeff=0.9987;MQ=90.29;MQ0=0;MQRankSum=-1.091;QD=36.90;ReadPosRankSum=-0.083;VQSLOD=3.5916;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,108,1653	0/0:23,0:23:69.24:0,69,1103	0/0:31,0:31:93.31:0,93,1446	0/0:26,0:26:72.24:0,72,1080	1/1:0,28:28:78.26:1091,78,0	0/0:27,0:27:81.28:0,81,1295	0/0:25,0:25:75.26:0,75,1194	0/0:32,0:32:93.31:0,93,1462	0/0:29,0:29:87.30:0,87,1386	0/0:31,0:31:93.30:0,93,1445	0/0:26,0:26:78.25:0,78,1224	0/0:24,0:24:72.25:0,72,1149	0/0:33,0:33:95.96:0,96,1533	0/0:34,0:34:99:0,102,1631	0/0:28,0:28:84.29:0,84,1338	0/0:27,0:27:78.25:0,78,1223	0/0:29,0:29:87.30:0,87,1383	0/0:10,0:10:30.10:0,30,479	0/0:14,0:14:42.08:0,42,581	0/0:28,0:28:84.29:0,84,1338	0/0:33,0:33:99:0,99,1547	1/1:0,21:21:60.20:839,60,0	0/0:26,0:26:78.27:0,78,1241	0/0:20,0:20:60.18:0,60,934	0/0:27,0:27:81.28:0,81,1295	0/0:30,0:30:90.31:0,90,1439	0/0:29,0:29:87.30:0,87,1383	0/0:9,0:9:24.08:0,24,384
chr10	21561273	.	CA	C	1065.96	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.924;DP=631;FS=0.000;HRun=8;HaplotypeScore=57.4192;InbreedingCoeff=0.9975;MQ=73.99;MQ0=0;MQRankSum=0.109;QD=19.74;ReadPosRankSum=2.229;VQSLOD=3.3714;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:38:99:0,99,1171	0/0:16,0:16:48.14:0,48,570	0/0:12,0:12:24.07:0,24,284	0/0:10,0:10:24.04:0,24,269	1/1:3,36:38:87.13:840,87,0	0/0:25,0:25:63.19:0,63,759	0/0:13,0:13:39.12:0,39,470	0/0:34,0:34:93.29:0,93,1123	0/0:15,0:15:36.11:0,36,435	0/0:32,0:32:83.74:0,84,980	0/0:26,0:26:75.20:0,75,883	0/0:21,0:21:57.17:0,57,684	0/0:23,0:23:60.18:0,60,721	0/0:22,0:22:57.16:0,57,676	0/0:32,0:32:90.25:0,90,1062	0/0:20,0:20:57.16:0,57,676	0/0:25,0:25:69.21:0,69,832	0/0:14,0:14:36.09:0,36,419	0/0:16,0:16:39.12:0,39,469	0/0:25,0:25:75.22:0,75,895	0/0:15,0:15:39.12:0,39,469	1/1:0,15:15:36.05:348,36,0	0/0:28,0:28:78.24:0,78,942	0/0:15,0:15:39.12:0,39,467	0/0:30,0:30:75.23:0,75,905	0/0:23,0:23:63.19:0,63,761	0/0:29,0:29:75.23:0,75,902	0/0:18,0:18:45.12:0,45,530
chr10	21561903	.	T	TC	5889.94	PASS	AB=1.000;AC=47;AF=0.839;AN=56;BaseQRankSum=-4.340;DP=503;FS=2.323;HRun=9;HaplotypeScore=94.1642;InbreedingCoeff=0.3007;MQ=76.37;MQ0=4;MQRankSum=-0.769;QD=12.97;ReadPosRankSum=5.770;VQSLOD=4.5615;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,13:17:6.94:288,7,0	0/1:11,0:11:14.40:14,0,17	0/1:36,0:25:26.78:27,0,146	0/1:33,0:21:46.93:55,0,47	1/1:5,16:21:38.78:377,39,0	1/1:4,19:23:51.14:561,51,0	1/1:5,10:16:23.13:293,23,0	0/0:35,0:35:80.34:0,80,445	1/1:2,14:16:13.07:372,13,0	1/1:4,10:14:29.81:266,30,0	1/1:2,7:9:17.84:179,18,0	1/1:1,7:8:12.03:133,12,0	1/1:4,11:15:27.07:299,27,0	1/1:0,9:9:15.04:166,15,0	0/0:14,0:13:30.70:0,31,149	0/1:24,0:23:3.23:65,0,3	1/1:24,0:24:24.36:112,24,0	1/1:5,7:12:0.69:217,1,0	1/1:10,0:10:9.69:47,10,0	0/1:23,0:23:52.22:59,0,52	1/1:13,0:13:21.71:66,22,0	1/1:4,13:17:31.55:290,32,0	1/1:2,12:14:20.64:210,21,0	1/1:0,13:13:30.08:332,30,0	1/1:7,19:26:42.11:464,42,0	1/1:4,11:15:28.30:288,28,0	1/1:6,22:27:54.14:591,54,0	1/1:1,6:7:12.01:121,12,0
chr10	21561911	.	C	CA	2848.85	PASS	AB=1.000;AC=30;AF=0.536;AN=56;BaseQRankSum=3.361;DP=536;FS=3.997;HRun=0;HaplotypeScore=109.0069;InbreedingCoeff=-0.2847;MQ=79.88;MQ0=4;MQRankSum=-1.652;QD=6.69;ReadPosRankSum=12.767;VQSLOD=1.8062;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:16,0:16:37.52:38,0,65	1/1:1,8:9:13.59:160,14,0	0/0:38,0:28:25.25:0,25,436	0/1:30,0:18:27.85:28,0,76	0/1:26,0:26:42:42,0,128	0/1:26,0:26:48.22:81,0,48	0/1:16,0:16:29.17:29,0,52	0/0:39,0:39:99:0,106,1228	0/1:18,0:18:34.34:52,0,34	0/0:18,0:18:4.32:0,4,171	0/1:8,0:8:12.76:13,0,32	0/1:9,0:9:12.94:13,0,38	0/1:20,0:20:18.55:41,0,19	0/1:10,0:10:12.76:24,0,13	0/0:15,0:14:31.77:0,32,198	1/1:4,18:21:50.74:546,51,0	1/1:2,23:25:54.89:615,55,0	0/1:13,0:13:24.98:25,0,69	1/1:3,9:12:13.21:258,13,0	1/1:6,19:25:4.46:453,4,0	1/1:2,10:12:33.07:353,33,0	0/1:19,0:19:29.27:29,0,45	0/1:20,0:20:13.74:14,0,93	0/1:18,0:18:18.52:40,0,19	0/1:23,0:23:41.09:49,0,41	0/1:14,0:14:19.19:19,0,56	0/1:27,0:26:2.90:92,0,3	0/1:8,0:8:7.45:7,0,31
chr10	21561912	.	CA	C	706.22	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-5.070;DP=528;FS=3.422;HRun=8;HaplotypeScore=111.2430;InbreedingCoeff=0.9491;MQ=80.93;MQ0=4;MQRankSum=1.975;QD=18.58;ReadPosRankSum=-3.523;VQSLOD=2.1625;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:38.74:0,39,297	0/0:8,0:8:17.16:0,17,90	0/0:40,0:30:44.84:0,45,359	0/0:28,0:17:21.53:0,22,166	0/0:23,0:23:49.84:0,50,383	0/0:24,0:24:64.74:0,65,490	0/0:17,0:17:44.78:0,45,350	1/1:7,31:38:89.94:801,90,0	0/0:17,0:17:44.77:0,45,350	0/0:17,0:17:38.59:0,39,299	0/0:9,0:9:20.86:0,21,158	0/0:9,0:9:17.87:0,18,133	0/0:20,0:20:53.80:0,54,431	0/0:10,0:10:17.85:0,18,136	0/0:1,0:14:28.41:0,28,143	0/0:21,0:21:54.24:0,54,282	0/0:26,0:26:56.96:0,57,292	0/0:15,0:15:41.78:0,42,328	0/0:12,0:12:29.76:0,30,155	0/0:23,0:24:66.96:0,67,419	0/0:11,0:12:26.81:0,27,139	0/0:17,0:17:32.89:0,33,267	0/0:19,0:20:40.83:0,41,320	0/0:18,0:18:47.79:0,48,380	0/0:22,0:22:50.78:0,51,395	0/0:15,0:15:37.95:0,38,298	0/0:26,0:25:68.69:0,69,532	0/0:8,0:8:14.94:0,15,119
chr10	21562442	.	CT	C	12829.58	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-7.945;DP=613;FS=7.730;HRun=9;HaplotypeScore=68.7741;InbreedingCoeff=0.9815;MQ=82.05;MQ0=0;MQRankSum=-7.107;QD=22.71;ReadPosRankSum=4.953;VQSLOD=5.4611;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,26:30:72.04:659,72,0	1/1:0,7:7:15.01:137,15,0	0/0:30,0:27:49.42:0,49,475	0/0:18,0:15:23.37:0,23,247	1/1:3,22:25:66.03:604,66,0	1/1:3,32:35:84.04:769,84,0	1/1:1,19:20:54.03:494,54,0	1/1:5,30:35:90.04:823,90,0	1/1:3,20:23:51.03:467,51,0	1/1:1,29:30:87.05:796,87,0	1/1:2,15:17:42.02:384,42,0	1/1:3,9:12:30:271,30,0	1/1:5,20:25:48.01:439,48,0	1/1:1,28:29:78.04:714,78,0	1/1:2,20:22:54.02:494,54,0	1/1:1,14:15:42.02:384,42,0	1/1:6,18:25:50.06:445,50,0	1/1:0,5:5:15.01:137,15,0	1/1:0,18:18:54.02:490,54,0	1/1:4,31:35:55.46:761,55,0	1/1:2,15:17:45.02:412,45,0	1/1:3,13:16:39.02:357,39,0	1/1:3,16:19:38.96:357,39,0	1/1:0,11:11:33.02:302,33,0	1/1:1,20:21:51.03:466,51,0	1/1:4,21:25:63:568,63,0	1/1:4,32:36:93.04:851,93,0	1/1:2,10:12:27.01:247,27,0
chr10	21562665	.	TG	T	6622.95	PASS	AB=0.838;AC=54;AF=0.964;AN=56;BaseQRankSum=2.645;DP=426;FS=13.041;HRun=1;HaplotypeScore=184.6393;InbreedingCoeff=-0.0335;MQ=77.54;MQ0=0;MQRankSum=-7.386;QD=15.55;ReadPosRankSum=1.106;VQSLOD=3.4155;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,22:22:52.71:341,53,0	1/1:0,5:5:14.24:95,14,0	0/1:8,5:13:99:118,0,105	0/1:19,1:21:19.70:20,0,257	1/1:0,21:21:55:469,55,0	1/1:3,29:31:86.51:555,87,0	1/1:0,12:12:30.28:183,30,0	1/1:5,25:30:88.86:789,89,0	1/1:1,8:9:24.82:115,25,0	1/1:0,20:20:56.72:353,57,0	1/1:2,19:21:51.83:249,52,0	1/1:5,11:16:45.97:328,46,0	1/1:3,12:15:33.47:168,33,0	1/1:3,9:11:20.37:137,20,0	1/1:4,11:15:35.33:186,35,0	1/1:1,9:10:26.43:165,26,0	1/1:1,9:10:21.01:114,21,0	1/1:0,4:4:12:129,12,0	1/1:0,9:9:26.56:229,27,0	1/1:0,22:22:60.07:309,60,0	1/1:4,6:10:16.77:109,17,0	1/1:2,9:11:27.81:192,28,0	1/1:1,15:16:34.03:158,34,0	1/1:2,4:6:7.97:49,8,0	1/1:2,15:17:41.49:255,41,0	1/1:2,18:20:58.71:442,59,0	1/1:0,20:20:51.09:259,51,0	1/1:1,5:6:17.44:107,17,0
chr10	21562668	.	G	GT	4331.09	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=5.096;DP=414;FS=10.220;HRun=2;HaplotypeScore=190.9725;InbreedingCoeff=0.7824;MQ=75.16;MQ0=0;MQRankSum=-8.263;QD=11.34;ReadPosRankSum=3.503;VQSLOD=2.6001;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,19:22:41.56:192,42,0	1/1:1,4:5:11.39:58,11,0	0/0:11,0:11:2.28:0,2,103	0/0:21,0:21:49.11:0,49,281	1/1:4,17:21:28.92:116,29,0	1/1:3,27:29:69.81:329,70,0	1/1:3,9:12:24.82:110,25,0	1/1:10,18:28:59.04:391,59,0	1/1:1,8:9:25.14:119,25,0	1/1:2,18:20:51.32:289,51,0	1/1:3,18:21:48.21:208,48,0	1/1:6,10:16:43.17:270,43,0	1/1:3,12:15:34:183,34,0	1/1:3,8:10:22.38:119,22,0	1/1:2,11:13:30.07:132,30,0	1/1:2,8:10:21.67:94,22,0	1/1:2,8:10:21.76:101,22,0	1/1:2,2:4:8.98:72,9,0	1/1:3,6:9:17.63:110,18,0	1/1:1,21:22:55.27:250,55,0	1/1:3,5:8:11.02:49,11,0	1/1:2,8:10:25.13:124,25,0	1/1:2,14:16:31.98:130,32,0	1/1:2,4:6:8.18:52,8,0	1/1:3,14:17:39.03:185,39,0	1/1:5,15:20:49.81:296,50,0	1/1:2,18:20:48.34:236,48,0	1/1:1,5:6:17.57:114,18,0
chr10	21562735	.	T	TCC	1552.30	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=-1.764;DP=500;FS=2.224;HRun=8;HaplotypeScore=196.2082;InbreedingCoeff=-0.0055;MQ=65.39;MQ0=0;MQRankSum=-9.112;QD=4.85;ReadPosRankSum=-1.885;VQSLOD=-0.6394;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:23:17.17:17,0,43	0/1:7,0:7:1.19:16,0,1	0/0:15,0:13:23.25:0,23,231	0/0:16,0:13:14.27:0,14,132	1/1:5,16:22:39.09:573,39,0	0/1:21,0:21:5.65:6,0,53	0/1:17,0:17:0.83:1,0,89	1/1:3,1:18:36.98:439,37,0	0/1:16,0:16:17.68:46,0,18	0/1:18,0:18:7.24:7,0,117	0/0:19,0:19:17.03:0,17,171	0/1:27,0:27:51.86:52,0,105	0/1:20,0:20:22.99:23,0,35	0/1:15,0:14:19:19,0,56	0/0:20,0:20:24.23:0,24,296	0/1:22,0:22:1.19:1,0,65	1/1:11,0:11:17.27:68,17,0	0/0:8,0:8:1.28:0,1,21	0/0:20,0:19:0.61:0,1,98	0/0:33,0:33:14.81:0,15,203	0/0:13,0:13:8.26:0,8,107	1/1:6,9:15:27.01:397,27,0	0/1:12,0:12:5.91:6,0,81	0/1:10,0:10:5.04:5,0,46	0/1:20,0:20:24.25:24,0,100	0/1:18,0:18:8.96:9,0,90	0/0:36,0:36:10:0,10,175	0/1:7,0:7:5.65:7,0,6
chr10	21562742	.	C	CTT	9681.62	PASS	AB=1.000;AC=38;AF=0.679;AN=56;BaseQRankSum=-2.047;DP=481;FS=0.849;HRun=0;HaplotypeScore=154.3561;InbreedingCoeff=0.6299;MQ=64.83;MQ0=0;MQRankSum=-5.525;QD=26.38;ReadPosRankSum=3.949;VQSLOD=5.7811;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,19:21:50.60:730,51,0	0/1:7,0:7:1.42:18,0,1	0/0:14,0:12:23.45:0,23,330	0/0:13,0:9:17.81:0,18,229	0/0:17,0:17:11.63:0,12,110	1/1:18,2:20:6.20:100,6,0	1/1:3,12:15:38.04:602,38,0	0/0:21,0:21:50.68:0,51,417	1/1:1,14:15:42.09:632,42,0	1/1:6,13:20:47.21:708,47,0	1/1:7,10:19:32.20:528,32,0	1/1:6,21:28:57.62:976,58,0	1/1:3,16:20:47.01:698,47,0	1/1:3,12:14:31.58:484,32,0	0/1:20,0:20:36.34:133,0,36	0/0:20,0:20:11:0,11,92	1/1:12,0:12:21.83:90,22,0	1/1:1,7:8:21.49:297,21,0	0/0:17,0:16:0.32:0,0,108	0/1:34,0:34:10.69:11,0,225	0/1:13,0:13:0.83:1,0,127	0/0:12,0:12:0.16:0,0,88	1/1:3,9:12:25.34:411,25,0	1/1:2,8:10:18.73:326,19,0	1/1:4,14:18:43.62:649,44,0	1/1:5,13:18:41.68:660,42,0	1/1:6,27:34:81.85:1344,82,0	1/1:0,7:7:18.06:285,18,0
chr10	21562743	.	C	CTT	14788.82	PASS	AB=1.000;AC=49;AF=0.875;AN=56;BaseQRankSum=1.573;DP=495;FS=14.843;HRun=7;HaplotypeScore=140.3060;InbreedingCoeff=0.5283;MQ=65.20;MQ0=0;MQRankSum=-4.222;QD=32.29;ReadPosRankSum=3.278;VQSLOD=3.5816;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:21:48.16:745,48,0	1/1:0,7:7:18.06:293,18,0	0/1:14,0:12:32.14:32,0,101	0/0:14,0:10:14.91:0,15,149	0/1:15,0:15:7.97:8,0,40	1/1:4,17:22:9.03:146,9,0	1/1:15,0:15:39.60:623,40,0	0/0:23,0:23:37.98:0,38,269	1/1:16,0:16:45.62:694,46,0	1/1:19,0:21:52.11:755,52,0	1/1:18,0:19:39.13:597,39,0	1/1:27,0:28:63.21:1008,63,0	1/1:21,0:21:51.16:768,51,0	1/1:16,1:16:39.60:606,40,0	1/1:3,1:22:60.07:613,60,0	1/1:2,18:21:57.19:908,57,0	1/1:1,12:13:36.12:584,36,0	1/1:8,0:8:21.07:318,21,0	1/1:3,14:17:45.12:682,45,0	1/1:6,27:33:78.19:1194,78,0	1/1:6,8:14:21.06:320,21,0	0/1:10,0:10:12.50:12,0,37	1/1:13,0:13:30.10:462,30,0	1/1:10,0:10:24.08:385,24,0	1/1:19,0:19:45.62:705,46,0	1/1:18,0:19:42.61:663,43,0	1/1:34,0:34:87.29:1378,87,0	1/1:7,0:7:18.06:289,18,0
chr10	21562957	.	CA	C	8421.98	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=10.271;DP=532;FS=7.119;HRun=8;HaplotypeScore=62.3202;InbreedingCoeff=0.9743;MQ=67.20;MQ0=0;MQRankSum=-1.644;QD=23.86;ReadPosRankSum=6.052;VQSLOD=5.0716;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,16:17:39.06:377,39,0	0/0:2,0:2:6.02:0,6,72	0/0:8,0:7:12.02:0,12,130	0/0:11,0:11:14.36:0,14,218	0/0:21,0:21:60.14:0,60,705	1/1:1,23:24:60.09:579,60,0	1/1:1,8:9:21.03:203,21,0	0/0:35,0:35:90.26:0,90,1066	1/1:3,19:22:45.07:434,45,0	1/1:2,9:11:24.04:232,24,0	1/1:4,26:30:75.11:724,75,0	1/1:1,23:24:60.10:579,60,0	1/1:1,21:22:54.09:521,54,0	1/1:1,21:22:60.10:579,60,0	1/1:0,29:29:81.13:782,81,0	0/0:17,1:18:25.19:0,25,587	0/0:18,0:18:54.17:0,54,652	1/1:1,16:17:42.07:406,42,0	0/0:18,0:18:42.11:0,42,493	0/0:29,0:29:72.22:0,72,870	0/0:7,0:7:15.05:0,15,181	0/0:12,0:12:33.10:0,33,399	1/1:2,14:16:42.07:405,42,0	1/1:2,13:15:30.05:290,30,0	1/1:4,20:24:51.08:492,51,0	1/1:0,29:29:87.13:834,87,0	1/1:0,22:22:48.08:463,48,0	1/1:1,19:20:54.09:521,54,0
chr10	21563382	.	C	CA	26545.84	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-11.521;DP=809;FS=3.733;HRun=3;HaplotypeScore=105.7234;InbreedingCoeff=0.9982;MQ=92.91;MQ0=0;MQRankSum=-9.217;QD=38.92;ReadPosRankSum=6.286;VQSLOD=3.5496;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,46:48:99:1676,117,0	1/1:0,7:7:21.07:302,21,0	0/0:30,0:30:89.89:0,90,1000	0/0:39,0:39:90.39:0,90,1126	0/0:26,0:26:78.25:0,78,967	1/1:1,16:17:45.15:648,45,0	1/1:0,31:31:87.29:1253,87,0	1/1:4,43:47:99:1791,126,0	1/1:1,24:25:66.22:951,66,0	1/1:1,26:27:75.21:1039,75,0	1/1:0,23:23:69.19:970,69,0	1/1:0,27:27:81.27:1166,81,0	1/1:1,37:38:99:1469,102,0	1/1:0,35:35:99:1469,102,0	1/1:0,24:24:69.23:994,69,0	1/1:2,42:44:99:1599,111,0	1/1:1,36:37:99:1469,102,0	1/1:0,10:10:30.10:432,30,0	1/1:3,23:26:75.25:1065,75,0	1/1:1,25:26:72.24:1037,72,0	1/1:4,28:32:75.25:1080,75,0	0/0:32,0:32:90.15:0,90,1093	1/1:0,18:18:48.16:691,48,0	1/1:0,45:45:99:1772,123,0	1/1:1,31:32:87.29:1253,87,0	1/1:1,22:23:66.22:951,66,0	1/1:0,28:28:78:1123,78,0	1/1:4,8:12:24.08:346,24,0
chr10	21564533	.	TA	T	1237.72	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.848;DP=612;FS=5.362;HRun=7;HaplotypeScore=62.0499;InbreedingCoeff=0.9908;MQ=78.75;MQ0=0;MQRankSum=-0.116;QD=24.75;ReadPosRankSum=0.458;VQSLOD=4.0441;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,102,1282	0/0:6,0:6:15.04:0,15,176	0/0:18,0:18:36.11:0,36,433	0/0:18,0:18:25.13:0,25,384	1/1:3,28:31:83.55:809,84,0	0/0:24,0:24:66.21:0,66,830	0/0:24,0:24:66.20:0,66,817	0/0:36,0:36:90.28:0,90,1121	0/0:13,0:13:39.12:0,39,489	0/0:17,0:17:48.15:0,48,604	0/0:21,0:20:51.16:0,51,638	0/0:27,0:27:78.22:0,78,955	0/0:27,0:27:75.15:0,75,874	0/0:15,0:15:42.12:0,42,517	0/0:24,0:24:66.19:0,66,805	0/0:17,0:17:48.15:0,48,604	0/0:35,0:35:99:0,102,1254	0/0:22,0:22:63.20:0,63,791	0/0:21,0:21:54.17:0,54,669	0/0:30,0:30:87.28:0,87,1095	0/0:18,0:18:48.11:0,48,564	1/1:0,19:19:54.12:551,54,0	0/0:19,0:19:54.17:0,54,679	0/0:16,0:16:48.14:0,48,590	0/0:19,0:19:51.16:0,51,642	0/0:23,0:23:66.20:0,66,819	0/0:23,0:23:66.20:0,66,818	0/0:11,0:11:33.11:0,33,415
chr10	21564675	.	GCAGA	G	1510.77	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.397;DP=669;FS=4.580;HRun=0;HaplotypeScore=138.4729;InbreedingCoeff=0.9999;MQ=60.98;MQ0=2;MQRankSum=-2.284;QD=38.74;ReadPosRankSum=1.063;VQSLOD=4.0541;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,138,3627	0/0:13,0:13:39.13:0,39,1016	0/0:22,0:20:52.57:0,53,1316	0/0:36,0:32:80.76:0,81,2008	1/1:3,18:21:45.15:836,45,0	0/0:27,0:27:78.27:0,78,2105	0/0:25,0:25:69.24:0,69,1821	0/0:31,0:31:87.30:0,87,2271	0/0:25,0:25:66.23:0,66,1749	0/0:22,0:22:66.23:0,66,1742	0/0:19,0:19:54.19:0,54,1443	0/0:18,0:18:51.18:0,51,1368	0/0:21,0:21:57.20:0,57,1538	0/0:17,0:17:48.15:0,48,1206	0/0:21,0:21:60.21:0,60,1599	0/0:18,0:18:45.15:0,45,1190	0/0:44,0:44:99:0,132,3495	0/0:31,0:31:81.23:0,81,2110	0/0:18,0:18:48.15:0,48,1205	0/0:20,0:20:48.16:0,48,1248	0/0:21,0:20:57.20:0,57,1480	1/1:1,17:18:42.14:796,42,0	0/0:19,0:19:57.20:0,57,1537	0/0:31,0:31:90.30:0,90,2374	0/0:29,0:29:78.27:0,78,2072	0/0:20,0:20:57.20:0,57,1539	0/0:18,0:18:54.17:0,54,1382	0/0:16,0:16:44.91:0,45,1212
chr10	21564855	.	GGATC	G	6133.25	PASS	AB=0.976;AC=38;AF=0.679;AN=56;BaseQRankSum=-2.745;DP=565;FS=8.560;HRun=0;HaplotypeScore=154.3380;InbreedingCoeff=-0.1440;MQ=60.05;MQ0=1;MQRankSum=1.144;QD=11.36;ReadPosRankSum=3.283;VQSLOD=3.4578;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:24,2:26:6.49:290,0,6	0/1:12,0:12:34.20:100,0,34	0/0:13,0:11:11.70:0,12,205	0/0:12,0:8:5.93:0,6,48	1/1:23,0:23:41.81:336,42,0	1/1:20,2:22:21.66:322,22,0	0/1:16,0:16:15.32:132,0,15	1/1:40,0:40:30.84:659,31,0	1/1:18,2:20:18.89:174,19,0	1/1:26,0:26:61.65:524,62,0	1/1:16,0:16:36.81:298,37,0	0/1:17,4:21:7.27:201,0,7	0/1:23,3:26:15.63:331,0,16	1/1:13,3:16:7.85:314,8,0	0/1:21,0:21:21.79:22,0,115	0/1:24,0:24:99:147,0,226	1/1:17,0:17:23.94:248,24,0	1/1:23,0:23:46.86:373,47,0	0/1:15,0:15:10.89:238,0,11	1/1:21,0:21:26.91:230,27,0	0/1:18,0:18:14.73:207,0,15	1/1:12,0:12:23.78:189,24,0	0/1:16,0:16:7.30:189,0,7	1/1:13,0:13:7.16:174,7,0	0/1:25,0:25:72.95:73,0,108	0/1:32,0:32:99:282,0,201	0/1:24,0:24:71.05:73,0,71	0/1:15,0:15:7.74:8,0,90
chr10	21564878	.	TCTATCTA	T	7920.04	PASS	AB=0.954;AC=32;AF=0.571;AN=56;BaseQRankSum=-12.259;DP=581;FS=4.053;HRun=0;HaplotypeScore=196.6889;InbreedingCoeff=0.2232;MQ=56.31;MQ0=9;MQRankSum=0.621;QD=18.17;ReadPosRankSum=-4.242;VQSLOD=3.4710;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:25:45.58:665,46,0	0/1:12,0:12:99:161,0,237	0/1:17,0:5:24.46:24,0,36	0/0:18,0:6:8.80:0,9,107	0/0:20,0:20:14.16:0,14,98	1/1:19,0:19:33.08:505,33,0	1/1:14,0:14:6:69,6,0	1/1:35,0:35:80.91:1121,81,0	1/1:20,0:20:9.03:167,9,0	0/1:29,0:29:38.58:643,0,39	0/1:22,0:22:93.83:358,0,94	1/1:15,0:15:27.54:447,28,0	1/1:25,0:25:50.85:760,51,0	1/1:17,0:17:32.94:543,33,0	0/1:3,17:20:1.90:356,0,2	0/1:25,0:25:99:322,0,560	1/1:15,0:14:9.03:193,9,0	1/1:21,0:21:43.20:734,43,0	0/1:10,0:9:62.89:63,0,180	0/1:28,0:28:14.32:14,0,161	0/0:20,0:20:23.81:0,24,235	0/0:16,0:16:26.28:0,26,176	0/1:19,0:19:99:103,0,114	1/1:17,0:17:26.59:373,27,0	0/0:30,0:30:30.54:0,31,246	0/1:31,0:31:99:300,0,293	0/0:20,0:20:1.83:0,2,19	0/0:21,0:21:13.87:0,14,131
chr10	21564882	.	TCTA	T	11594.88	PASS	AB=0.940;AC=49;AF=0.875;AN=56;BaseQRankSum=-6.338;DP=575;FS=1.711;HRun=0;HaplotypeScore=159.3552;InbreedingCoeff=0.1020;MQ=55.38;MQ0=9;MQRankSum=1.082;QD=20.82;ReadPosRankSum=-2.104;VQSLOD=4.3011;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:23,3:26:45.15:691,45,0	0/1:11,0:11:31.31:235,0,31	0/1:16,0:4:30.07:30,0,36	0/0:18,0:6:9.48:0,9,108	1/1:1,20:21:17.73:297,18,0	1/1:17,2:19:36.01:535,36,0	1/1:10,0:10:5.96:69,6,0	1/1:32,0:32:80.95:1226,81,0	1/1:1,21:22:9:102,9,0	1/1:24,4:29:78.17:1128,78,0	1/1:18,5:23:63.11:866,63,0	1/1:11,5:16:27.43:349,27,0	1/1:23,3:26:53.97:797,54,0	1/1:12,4:16:32.94:433,33,0	1/1:19,1:20:18.03:195,18,0	0/1:25,1:26:83.31:423,0,83	1/1:3,10:13:9.03:144,9,0	1/1:21,1:22:46.85:757,47,0	0/1:7,3:9:15.60:294,0,16	1/1:2,27:29:29.88:436,30,0	1/1:5,14:19:8.71:349,9,0	1/1:4,12:16:33.03:446,33,0	1/1:14,4:18:39.07:548,39,0	1/1:15,1:16:26.85:349,27,0	1/1:26,4:30:8.40:247,8,0	0/1:29,1:30:11.22:582,0,11	1/1:21,0:21:3.37:14,3,0	1/1:20,0:20:7.40:51,7,0
chr10	21564885	.	A	ATCTAT	12412.74	PASS	AB=0.918;AC=48;AF=0.857;AN=56;BaseQRankSum=-8.588;DP=559;FS=1.415;HRun=0;HaplotypeScore=167.5851;InbreedingCoeff=0.0807;MQ=54.51;MQ0=9;MQRankSum=0.135;QD=22.90;ReadPosRankSum=-6.070;VQSLOD=3.2591;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:25:49.92:714,50,0	1/1:0,0:11:30.01:451,30,0	0/1:15,0:3:28.07:28,0,36	0/0:16,0:5:9.03:0,9,116	0/1:20,0:21:24.81:37,0,25	1/1:2,0:17:35.99:528,36,0	1/1:0,0:7:6:94,6,0	1/1:4,0:33:90.20:1324,90,0	1/1:21,0:22:9.03:141,9,0	1/1:5,0:30:56.97:935,57,0	1/1:5,0:23:44.87:734,45,0	1/1:5,0:13:23.51:373,24,0	1/1:3,0:23:50.21:750,50,0	1/1:4,0:16:32.95:491,33,0	0/1:19,0:19:3.71:69,0,4	1/1:1,0:25:65.48:836,65,0	1/1:10,0:12:8.92:104,9,0	1/1:3,0:23:56.61:795,57,0	1/1:4,0:9:9.75:225,10,0	0/1:27,0:29:38.15:92,0,38	0/1:14,0:18:17.75:147,0,18	0/1:12,0:16:20.91:147,0,21	1/1:5,0:17:21.29:392,21,0	1/1:1,0:15:26.90:351,27,0	1/1:4,23:30:20.89:492,21,0	1/1:2,25:30:77.79:1499,78,0	1/1:0,19:21:9.03:298,9,0	1/1:0,16:20:15.90:366,16,0
chr10	21565043	.	CATGTATGTATGTATGT	C	5188.67	PASS	AB=1.000;AC=33;AF=0.660;AN=50;BaseQRankSum=-3.708;DP=585;FS=22.800;HRun=0;HaplotypeScore=220.5917;InbreedingCoeff=0.2569;MQ=46.59;MQ0=23;MQRankSum=2.687;QD=13.55;ReadPosRankSum=4.925;VQSLOD=2.2983;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:16:5.21:93,5,0	0/0:7,0:7:2.76:0,3,16	0/0:30,0:5:0:0,0,0	./.	./.	1/1:16,0:16:12.04:368,12,0	0/0:13,0:13:0.47:0,0,1	0/1:35,0:26:34.20:82,0,34	1/1:18,0:18:7.55:232,8,0	1/1:13,20:32:51.94:1204,52,0	1/1:17,0:17:5.30:73,5,0	1/1:19,0:19:5.37:87,5,0	0/1:22,0:22:14.18:154,0,14	1/1:19,0:19:15.05:412,15,0	1/1:18,0:17:0.47:1,0,0	0/0:24,0:25:12.52:0,13,128	0/0:14,0:14:3.27:0,3,14	0/1:11,0:9:10.97:87,0,11	0/1:19,0:18:41.46:41,0,124	0/0:31,0:30:9.17:0,9,72	./.	1/1:24,0:19:2.42:24,2,0	1/1:21,0:21:14.81:238,15,0	1/1:17,0:17:9.02:206,9,0	1/1:17,0:17:12.03:276,12,0	1/1:25,0:25:36.12:745,36,0	1/1:22,0:22:26.42:672,26,0	0/1:13,0:12:99:196,0,107
chr10	21565098	.	CTA	C	1035.66	PASS	AB=0.947;AC=29;AF=0.558;AN=52;BaseQRankSum=7.457;DP=495;FS=0.685;HRun=0;HaplotypeScore=167.3373;InbreedingCoeff=0.1799;MQ=31.49;MQ0=13;MQRankSum=-1.281;QD=3.10;ReadPosRankSum=-0.722;VQSLOD=2.7030;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:20:0.15:1,0,0	1/1:6,6:12:17.80:222,18,0	0/0:9,0:2:5.61:0,6,52	./.	0/0:26,0:25:24.08:0,24,430	1/1:10,1:11:1.82:5,2,0	1/1:21,0:18:0.47:1,0,0	0/0:61,0:53:99:0,147,2248	1/1:17,0:17:5.78:47,6,0	0/1:27,2:29:83.73:84,0,373	0/1:18,0:18:0.12:0,0,0	0/1:10,0:10:19.89:20,0,38	0/1:15,0:15:10.67:11,0,70	0/1:15,0:14:0:1,0,0	0/0:25,0:24:3.01:0,3,43	1/1:3,12:15:5.59:74,6,0	1/1:5,15:20:20.63:255,21,0	0/1:7,2:8:14.10:14,0,171	1/1:9,4:11:10.80:149,11,0	0/1:13,15:26:5.74:6,0,16	./.	0/0:18,0:17:26.77:0,27,472	0/1:16,0:16:0:0,0,0	0/1:13,0:13:0.04:0,0,0	1/1:14,0:14:3:26,3,0	0/1:18,0:18:99:187,0,334	0/1:18,0:18:77:77,0,162	0/0:6,0:4:6.02:0,6,85
chr10	21565100	.	A	ATC	1144.35	PASS	AB=0.860;AC=26;AF=0.500;AN=52;BaseQRankSum=7.293;DP=519;FS=2.381;HRun=0;HaplotypeScore=181.1015;InbreedingCoeff=0.1750;MQ=31.27;MQ0=14;MQRankSum=-0.896;QD=3.40;ReadPosRankSum=-0.648;VQSLOD=2.8828;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:21,0:20:0.03:0,0,0	1/1:12,0:12:17.98:190,18,0	0/0:10,0:2:5.61:0,6,52	./.	0/0:27,0:26:24.07:0,24,294	1/1:9,4:13:1.82:5,2,0	0/1:19,5:21:0:0,0,0	0/0:63,0:55:99:0,129,1663	1/1:9,7:16:6.02:82,6,0	0/1:28,2:30:99:123,0,262	0/1:15,4:19:0:1,0,0	0/1:5,4:9:36.63:39,0,37	0/1:16,0:16:34.53:35,0,42	0/0:7,8:14:0.21:0,0,0	0/0:25,0:24:3.01:0,3,43	1/1:17,0:17:5.92:40,6,0	1/1:22,0:21:20.69:166,21,0	0/1:10,0:8:14.87:15,0,155	1/1:14,0:12:11.36:82,11,0	0/1:29,0:27:6.03:6,0,16	./.	0/0:17,0:16:26.81:0,27,334	0/1:11,5:16:0:0,0,0	0/1:11,2:13:0.26:0,0,0	1/1:12,4:16:3.01:45,3,0	0/1:13,8:21:99:281,0,263	0/1:10,9:19:99:178,0,143	0/0:6,1:5:6.02:0,6,85
chr10	21565108	.	A	ATC	1405.31	PASS	AB=0.958;AC=30;AF=0.556;AN=54;BaseQRankSum=8.489;DP=530;FS=0.000;HRun=0;HaplotypeScore=175.6599;InbreedingCoeff=0.3152;MQ=33.54;MQ0=15;MQRankSum=-0.965;QD=3.98;ReadPosRankSum=1.041;VQSLOD=2.6537;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:21:0.03:0,0,0	1/1:10,0:10:17.51:188,18,0	0/0:14,0:3:6.02:0,6,86	0/0:6,0:2:3:0,3,26	0/0:22,0:21:27.08:0,27,337	1/1:13,0:13:1.82:5,2,0	0/1:24,0:21:0:0,0,0	0/0:58,0:49:95.47:0,95,1398	1/1:19,0:19:9.01:106,9,0	0/1:26,0:25:7.15:252,0,7	0/1:17,0:18:0:1,0,0	1/1:11,0:11:5.92:69,6,0	0/1:5,0:19:23.67:34,0,24	0/0:18,0:17:0.01:0,0,0	0/0:11,16:27:2.88:0,3,15	1/1:16,0:16:6.39:41,6,0	1/1:23,0:22:20.90:169,21,0	0/1:12,0:10:21.87:22,0,56	1/1:11,0:10:8.89:62,9,0	0/1:27,0:25:11.74:25,0,12	./.	0/0:16,0:16:29.80:0,30,357	0/1:17,0:17:0:0,0,0	0/1:13,0:13:0.26:0,0,0	1/1:19,0:19:3.01:45,3,0	1/1:25,0:25:6.62:290,7,0	1/1:21,0:21:16.59:236,17,0	0/1:6,0:5:9.99:10,0,52
chr10	21566474	.	CTA	C	6614.32	PASS	AB=1.000;AC=35;AF=0.673;AN=52;BaseQRankSum=8.746;DP=286;FS=1.341;HRun=0;HaplotypeScore=53.9043;InbreedingCoeff=0.8311;MQ=76.04;MQ0=0;MQRankSum=-3.677;QD=30.91;ReadPosRankSum=0.286;VQSLOD=6.2383;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,8:8:21.07:276,21,0	0/0:6,0:6:18.06:0,18,309	0/1:7,0:7:0.01:0,0,58	0/0:9,0:8:5.66:0,6,18	1/1:3,13:16:39.13:513,39,0	1/1:0,12:12:36.12:473,36,0	1/1:0,5:5:12.04:158,12,0	1/1:4,42:46:99:1584,123,0	1/1:0,8:8:18.06:237,18,0	1/1:1,9:10:27.09:355,27,0	1/1:4,10:14:30.10:394,30,0	1/1:0,6:6:18.06:236,18,0	1/1:2,4:6:9.03:118,9,0	1/1:2,7:9:21.07:276,21,0	0/0:4,0:4:6.02:0,6,103	0/0:4,0:4:9.03:0,9,154	0/0:14,0:14:30.10:0,30,514	1/1:2,9:11:24.08:316,24,0	0/0:20,0:19:54.17:0,54,896	0/0:10,0:10:27.08:0,27,437	0/0:1,0:1:3.01:0,3,51	1/1:3,0:3:3:25,3,0	./.	./.	1/1:1,10:11:27.09:354,27,0	1/1:2,17:19:48.16:631,48,0	1/1:2,8:10:21.07:276,21,0	1/1:3,10:13:30.10:394,30,0
chr10	21566555	.	AAT	A	2943.69	PASS	AB=0.821;AC=28;AF=0.583;AN=48;BaseQRankSum=8.069;DP=232;FS=16.790;HRun=0;HaplotypeScore=78.5063;InbreedingCoeff=0.6973;MQ=59.15;MQ0=3;MQRankSum=1.571;QD=23.74;ReadPosRankSum=4.362;VQSLOD=3.2935;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:11:18.06:0,18,321	0/0:2,0:2:3.01:0,3,55	0/0:3,0:2:2.98:0,3,22	0/1:6,0:5:0.17:0,0,45	1/1:2,12:14:21.04:264,21,0	1/1:1,14:15:36.12:514,36,0	./.	0/0:51,0:49:99:0,113,1769	1/1:1,3:4:3:25,3,0	1/1:2,9:11:30.03:403,30,0	1/1:0,8:8:21.07:300,21,0	1/1:0,4:4:6.02:86,6,0	1/1:0,4:3:9.03:129,9,0	1/1:0,7:7:9.03:129,9,0	0/0:7,0:7:18.05:0,18,294	0/0:2,0:2:6.02:0,6,108	0/0:12,0:11:27.07:0,27,443	1/1:2,9:11:26.83:386,27,0	0/0:11,0:10:30.10:0,30,526	0/0:3,0:3:9.03:0,9,163	./.	1/1:0,2:2:3.01:43,3,0	./.	./.	1/1:1,11:12:15.05:214,15,0	1/1:0,5:5:15.05:215,15,0	0/1:4,5:9:7.80:114,0,8	1/1:1,11:12:21.07:299,21,0
chr10	21566681	.	C	CAT	360.20	PASS	AB=0.865;AC=12;AF=0.286;AN=42;BaseQRankSum=0.534;DP=155;FS=2.574;HRun=0;HaplotypeScore=44.5311;InbreedingCoeff=0.2311;MQ=51.25;MQ0=2;MQRankSum=1.103;QD=7.06;ReadPosRankSum=2.369;VQSLOD=2.5850;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:4,5:9:12.74:85,0,13	./.	./.	0/0:5,0:2:2.22:0,2,7	0/1:6,0:5:3.43:3,0,16	0/0:8,0:7:11:0,11,61	0/0:2,0:2:5.95:0,6,42	0/0:36,0:34:63.07:0,63,742	0/0:2,0:2:2.37:0,2,8	0/0:9,0:6:11.19:0,11,65	0/0:4,0:3:8.93:0,9,62	0/0:1,0:1:2.98:0,3,21	0/0:5,0:5:8.56:0,9,53	0/0:2,0:2:2.98:0,3,21	1/1:2,3:6:9.03:142,9,0	1/1:3,0:3:0.83:16,1,0	0/0:7,0:7:3.01:0,3,40	0/0:8,0:7:14.64:0,15,107	0/1:12,0:10:23.35:29,0,23	./.	./.	./.	./.	1/1:0,2:2:6.02:94,6,0	0/0:5,0:5:8.93:0,9,62	./.	1/1:5,2:7:2.89:47,3,0	0/1:4,1:4:11.80:70,0,12
chr10	21568182	.	AATAGATAGATAGATAG	A	5701.53	PASS	AB=0.801;AC=37;AF=0.740;AN=50;BaseQRankSum=1.350;DP=596;FS=16.203;HRun=0;HaplotypeScore=232.3338;InbreedingCoeff=0.1933;MQ=71.43;MQ0=3;MQRankSum=-3.834;QD=11.80;ReadPosRankSum=2.235;VQSLOD=1.7581;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:28:7.55:68,8,0	1/1:5,0:14:6.02:68,6,0	./.	./.	0/0:12,0:26:25.36:0,25,168	1/1:7,11:18:15.05:527,15,0	0/1:14,0:14:27.89:158,0,28	0/0:42,0:41:23.90:0,24,226	1/1:6,14:20:15.05:633,15,0	1/1:11,11:22:30.10:663,30,0	1/1:4,13:17:15.04:297,15,0	1/1:11,10:21:12.04:521,12,0	1/1:10,11:21:12.04:430,12,0	1/1:13,15:28:15.05:506,15,0	1/1:13,15:28:17.39:932,17,0	0/1:16,0:31:7.09:138,0,7	1/1:10,0:20:6.01:64,6,0	1/1:10,5:16:3.01:130,3,0	0/1:16,0:23:39.44:63,0,39	0/1:21,0:34:1:1,0,200	0/1:10,0:10:5.14:5,0,15	0/0:10,0:14:2.88:0,3,15	1/1:10,10:20:5.58:120,6,0	1/1:18,0:18:2.86:71,3,0	1/1:18,9:27:3.01:130,3,0	0/1:17,0:24:99:105,0,105	0/1:13,0:29:69.19:69,0,78	./.
chr10	21568400	.	AC	A	17965.19	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=15.715;DP=811;FS=2.219;HRun=2;HaplotypeScore=79.2116;InbreedingCoeff=0.9998;MQ=85.57;MQ0=0;MQRankSum=-2.666;QD=35.30;ReadPosRankSum=6.570;VQSLOD=4.8513;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,15:17:36.12:467,36,0	0/0:15,0:15:45.15:0,45,674	0/0:26,0:26:71.52:0,72,1028	0/0:25,0:25:66.10:0,66,924	1/1:1,26:27:72.23:935,72,0	1/1:0,30:30:87.28:1128,87,0	1/1:1,23:24:54.18:701,54,0	0/0:44,0:44:99:0,132,1969	1/1:0,25:25:69.22:896,69,0	1/1:3,38:41:99:1452,114,0	1/1:0,32:32:90.29:1168,90,0	1/1:0,38:38:99:1286,99,0	1/1:0,37:37:99:1285,99,0	1/1:1,32:33:93.30:1207,93,0	0/0:39,0:39:99:0,117,1693	0/0:40,0:40:99:0,120,1798	0/0:17,0:17:51.13:0,51,728	1/1:1,22:23:66.21:857,66,0	0/0:33,0:33:90.30:0,90,1343	0/0:37,0:37:99:0,111,1657	0/0:26,0:26:61.28:0,61,1085	1/1:0,20:20:54.18:701,54,0	1/1:0,33:33:90.29:1169,90,0	1/1:0,25:25:72.23:935,72,0	1/1:0,30:30:81.26:1052,81,0	1/1:0,28:28:84.27:1091,84,0	1/1:0,37:37:99:1285,99,0	1/1:0,9:9:27.09:351,27,0
chr10	21570860	.	GA	G	994.21	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.697;DP=643;FS=2.279;HRun=5;HaplotypeScore=60.5589;InbreedingCoeff=0.9969;MQ=81.05;MQ0=0;MQRankSum=-3.440;QD=26.87;ReadPosRankSum=2.040;VQSLOD=3.7028;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:93.30:0,93,1260	0/0:10,0:10:30.09:0,30,394	0/0:17,0:17:30.69:0,31,548	0/0:15,0:15:41.61:0,42,516	0/0:29,0:29:84.28:0,84,1148	0/0:19,0:19:57.19:0,57,779	0/0:24,0:24:69.20:0,69,910	0/0:39,0:39:99:0,117,1601	0/0:23,0:23:66.22:0,66,903	0/0:22,0:22:63.21:0,63,861	0/0:19,0:19:54.18:0,54,738	0/0:17,0:17:51.17:0,51,694	0/0:21,0:21:60.19:0,60,804	0/0:38,0:38:99:0,108,1381	1/1:3,34:37:96.27:1089,96,0	0/0:23,0:23:66.21:0,66,888	0/0:27,0:27:78.26:0,78,1067	0/0:27,0:27:81.21:0,81,1068	0/0:19,0:19:54.16:0,54,708	0/0:21,0:21:60.20:0,60,809	0/0:14,0:14:39.12:0,39,517	0/0:28,0:28:75.21:0,75,975	0/0:20,0:20:57.19:0,57,771	0/0:14,0:14:42.14:0,42,575	0/0:24,0:24:63.21:0,63,861	0/0:27,0:27:75.24:0,75,1012	0/0:28,0:27:69.22:0,69,928	0/0:8,0:8:24.06:0,24,311
chr10	21571632	.	ATGTGTGTGTG	A	2179.33	PASS	AB=0.943;AC=24;AF=0.429;AN=56;BaseQRankSum=-0.999;DP=666;FS=26.496;HRun=0;HaplotypeScore=226.2141;InbreedingCoeff=0.5333;MQ=68.07;MQ0=11;MQRankSum=-2.154;QD=6.83;ReadPosRankSum=0.196;VQSLOD=0.8552;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:35.13:0,35,836	0/1:7,0:10:4.37:4,0,55	0/0:33,0:24:8.95:0,9,73	0/0:33,0:26:12.40:0,12,99	0/0:26,0:26:30.10:0,30,745	0/1:33,0:33:1.97:124,0,2	1/1:17,0:16:22.79:248,23,0	0/0:32,0:32:22.51:0,23,248	0/1:18,0:17:10.97:109,0,11	1/1:21,0:21:32.04:388,32,0	1/1:8,0:7:6:94,6,0	1/1:30,1:30:14.65:268,15,0	1/1:12,0:11:14.98:222,15,0	1/1:28,1:27:19.29:406,19,0	0/0:8,21:29:5.69:0,6,47	0/1:17,0:18:18.94:33,0,19	0/1:15,0:16:21.61:22,0,52	1/1:18,0:16:21.08:275,21,0	0/0:27,0:24:6.54:0,7,34	0/0:21,0:24:24.81:0,25,215	0/0:29,0:31:20.84:0,21,166	0/0:22,0:22:32.09:0,32,599	0/1:23,0:23:12.82:35,0,13	1/1:36,0:35:11.95:92,12,0	1/1:29,0:29:4.36:59,4,0	0/0:22,0:22:30.36:0,30,365	0/0:25,0:24:33.03:0,33,609	0/0:14,0:14:17.99:0,18,333
chr10	21571661	.	TGTGTGTGA	T	3656.33	PASS	AB=0.942;AC=34;AF=0.630;AN=54;BaseQRankSum=-1.007;DP=671;FS=15.274;HRun=0;HaplotypeScore=188.0230;InbreedingCoeff=0.2000;MQ=43.58;MQ0=37;MQRankSum=-1.106;QD=7.06;ReadPosRankSum=-3.399;VQSLOD=1.1217;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:31,0:30:90.14:90,0,466	1/1:18,0:18:2.31:24,2,0	./.	0/0:25,0:6:8.05:0,8,45	0/1:19,0:19:35.20:35,0,417	0/1:3,20:23:18.98:76,0,19	1/1:19,3:21:16.25:184,16,0	0/0:25,0:20:8.59:0,9,359	1/1:9,4:12:15:228,15,0	1/1:25,4:27:56.42:855,56,0	1/1:7,3:8:5.99:49,6,0	1/1:10,21:29:12.13:245,12,0	1/1:7,3:9:18.83:311,19,0	1/1:19,9:25:32.63:486,33,0	0/0:26,0:25:8.89:0,9,63	1/1:28,0:26:5.61:61,6,0	0/1:25,0:22:21.75:53,0,22	1/1:18,4:19:41.75:515,42,0	0/1:27,0:23:9.46:61,0,9	1/1:39,0:38:11.36:65,11,0	0/1:31,0:24:10.48:10,0,20	0/1:17,0:15:15.32:15,0,241	0/0:8,19:26:2.74:0,3,12	1/1:14,29:42:5.98:73,6,0	1/1:6,26:32:12.29:120,12,0	0/1:20,0:19:99:102,0,133	0/0:22,0:22:13.50:0,14,229	0/0:13,0:13:2.84:0,3,171
chr10	21571667	.	TGA	T	3858.03	PASS	AB=1.000;AC=44;AF=0.815;AN=54;BaseQRankSum=4.069;DP=647;FS=6.728;HRun=0;HaplotypeScore=151.0887;InbreedingCoeff=0.3307;MQ=43.68;MQ0=42;MQRankSum=1.764;QD=6.95;ReadPosRankSum=0.824;VQSLOD=3.0318;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:23,7:29:26.71:450,27,0	1/1:17,0:17:4.44:35,4,0	./.	0/0:22,0:4:8.05:0,8,45	0/1:20,0:20:26.99:191,0,27	0/1:22,0:22:15.24:15,0,19	1/1:23,0:22:15.77:201,16,0	0/0:29,0:22:14:0,14,402	1/1:11,1:11:18.33:132,18,0	1/1:27,0:25:56.14:451,56,0	1/1:11,0:9:8.99:74,9,0	1/1:29,0:27:5.39:81,5,0	1/1:9,0:8:18.73:130,19,0	1/1:26,1:24:32.60:235,33,0	0/1:26,0:25:15.99:16,0,37	1/1:28,0:26:10.77:72,11,0	1/1:21,0:18:0.38:44,0,0	1/1:21,0:18:40.65:283,41,0	1/1:20,0:16:5.43:87,5,0	1/1:33,2:34:10.62:57,11,0	1/1:29,0:21:9.65:38,10,0	1/1:13,2:13:20.85:225,21,0	0/0:24,0:23:2.74:0,3,12	0/1:42,0:41:0.68:16,0,1	1/1:32,0:32:6.66:77,7,0	1/1:4,20:23:26.11:366,26,0	1/1:3,19:22:29.02:374,29,0	1/1:4,9:13:16.35:209,16,0
chr10	21571669	.	A	AGT	3178.34	PASS	AB=0.994;AC=35;AF=0.648;AN=54;BaseQRankSum=1.315;DP=641;FS=4.716;HRun=0;HaplotypeScore=158.2904;InbreedingCoeff=0.3070;MQ=43.75;MQ0=43;MQRankSum=1.911;QD=6.49;ReadPosRankSum=1.391;VQSLOD=3.1244;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:29:24.61:489,25,0	0/0:17,0:17:0.12:0,0,1	./.	0/0:23,0:3:6.02:0,6,68	0/1:21,0:21:28.03:231,0,28	0/1:23,0:23:2.59:3,0,31	0/1:23,1:23:11.45:219,0,11	0/0:25,0:18:41.49:0,41,486	1/1:12,0:11:12.12:113,12,0	1/1:26,0:24:46.24:612,46,0	1/1:11,0:9:3:25,3,0	0/1:28,0:26:13.73:63,0,14	1/1:10,0:9:14.20:110,14,0	1/1:28,1:26:20.98:224,21,0	0/0:26,0:25:6.02:0,6,72	1/1:28,0:26:7.16:61,7,0	0/0:21,0:18:1.07:0,1,8	1/1:21,0:18:37.69:432,38,0	0/1:17,0:12:0.67:15,0,1	1/1:35,0:34:1.79:5,2,0	0/1:29,0:21:0.01:0,0,0	0/1:15,0:13:17.76:60,0,18	0/0:23,0:22:2.96:0,3,33	1/1:38,2:39:3.01:46,3,0	1/1:32,0:32:10.37:76,10,0	1/1:25,0:24:24.07:264,24,0	1/1:22,0:22:28.47:221,28,0	1/1:13,0:13:6.18:64,6,0
chr10	21571684	.	GCA	G	593.23	PASS	AB=0.939;AC=17;AF=0.315;AN=54;BaseQRankSum=6.224;DP=638;FS=3.548;HRun=0;HaplotypeScore=163.3082;InbreedingCoeff=0.0202;MQ=42.42;MQ0=46;MQRankSum=-6.013;QD=1.83;ReadPosRankSum=-1.312;VQSLOD=2.4169;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,3:30:40.29:0,40,645	1/1:1,16:16:1.73:35,2,0	./.	0/0:23,0:2:6.02:0,6,99	0/1:20,0:20:48.71:49,0,507	0/0:21,1:21:9.17:0,9,264	0/0:26,0:25:33.06:0,33,620	0/0:31,0:25:72.25:0,72,1325	0/1:13,0:12:29.74:30,0,112	0/1:30,0:26:3.33:3,0,480	0/0:7,1:7:3.01:0,3,49	0/0:28,0:27:13.05:0,13,166	0/0:8,0:7:13.72:0,14,129	0/1:28,0:26:49.90:50,0,242	0/0:18,0:17:9.03:0,9,170	0/1:14,13:24:19.80:105,0,20	1/1:15,10:22:16.60:135,17,0	0/0:21,0:18:15.52:0,16,356	0/1:22,0:16:5.03:172,0,5	1/1:18,15:32:3:25,3,0	0/1:21,6:19:0.26:0,0,0	0/1:12,1:11:14.01:14,0,211	0/0:21,0:20:12.04:0,12,201	0/0:39,0:37:21.05:0,21,310	0/1:30,1:31:28.03:28,0,210	0/1:24,0:24:41.65:42,0,516	0/0:20,0:20:20.41:0,20,265	0/1:14,1:15:58.60:59,0,138
chr10	21571685	.	CAT	C	116.32	PASS	AB=0.991;AC=11;AF=0.204;AN=54;BaseQRankSum=5.188;DP=644;FS=7.984;HRun=0;HaplotypeScore=166.6125;InbreedingCoeff=0.2679;MQ=42.51;MQ0=46;MQRankSum=-4.459;QD=0.55;ReadPosRankSum=-0.674;VQSLOD=2.0765;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:55.92:0,56,991	1/1:17,0:16:1.66:16,2,0	./.	0/0:23,0:2:5.97:0,6,79	0/0:20,0:20:13.06:0,13,686	0/0:22,0:21:20.73:0,21,337	0/0:26,0:25:46.35:0,46,862	0/0:33,0:27:78.24:0,78,1452	0/1:13,0:12:3.94:4,0,210	0/0:30,1:27:43.75:0,44,927	0/0:8,0:7:3.01:0,3,61	0/0:28,0:27:23.58:0,24,292	0/0:8,0:7:17.52:0,18,226	0/0:29,0:27:38.38:0,38,527	0/0:19,0:18:12.03:0,12,190	0/1:26,1:24:43.26:76,0,43	1/1:25,0:22:6.34:80,6,0	0/0:21,0:18:38.79:0,39,610	0/1:22,0:16:53.05:53,0,57	0/1:32,1:32:0:0,0,0	0/1:28,0:20:0.26:0,0,0	0/0:13,0:11:16.02:0,16,331	0/0:21,0:20:12.04:0,12,242	0/0:38,0:36:21.07:0,21,401	0/1:31,0:31:2.11:2,0,283	0/0:23,1:24:23.85:0,24,811	0/0:20,0:20:29.03:0,29,457	0/1:15,0:15:3.07:3,0,259
chr10	21571699	.	CGT	C	338.89	PASS	AB=0.835;AC=6;AF=0.111;AN=54;BaseQRankSum=4.745;DP=702;FS=9.978;HRun=0;HaplotypeScore=171.3904;InbreedingCoeff=0.2075;MQ=43.85;MQ0=37;MQRankSum=-5.417;QD=1.91;ReadPosRankSum=-0.032;VQSLOD=2.1538;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:78.07:0,78,1196	0/1:15,2:16:0.07:0,0,0	./.	0/0:29,0:2:2.97:0,3,20	0/0:18,0:18:44.79:0,45,657	0/0:24,1:24:33.04:0,33,497	0/0:30,0:29:63.17:0,63,1002	0/0:36,0:32:69.33:0,69,1010	0/0:18,0:17:32.92:0,33,461	0/0:31,0:27:63.89:0,64,822	0/0:9,0:8:14.72:0,15,181	0/0:28,0:27:26.73:0,27,349	0/0:9,0:8:21.03:0,21,292	0/0:31,0:30:50.81:0,51,726	0/0:20,0:19:18.05:0,18,251	0/1:22,11:30:34.19:118,0,34	0/1:23,7:27:24.50:172,0,24	0/0:22,0:19:42.10:0,42,622	0/1:24,5:23:83.22:146,0,83	0/1:30,6:35:0.07:0,0,0	0/1:26,6:25:0.22:0,0,1	0/0:14,0:13:22.82:0,23,375	0/0:18,0:18:14.41:0,14,206	0/0:41,0:39:29.84:0,30,458	0/0:30,0:30:16.22:0,16,265	0/0:28,0:28:64.22:0,64,964	0/0:17,0:17:25.78:0,26,336	0/0:20,0:20:21.03:0,21,392
chr10	21571721	.	TGTGTGC	T	244.62	PASS	AB=0.989;AC=9;AF=0.161;AN=56;BaseQRankSum=7.487;DP=754;FS=2.620;HRun=0;HaplotypeScore=184.7064;InbreedingCoeff=0.3925;MQ=48.18;MQ0=33;MQRankSum=-4.699;QD=1.18;ReadPosRankSum=-1.573;VQSLOD=2.7600;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:69.87:0,70,1678	0/1:18,0:17:3.77:4,0,8	0/1:10,0:1:0:0,0,0	0/0:20,0:2:2.80:0,3,13	0/0:21,0:19:36.61:0,37,831	0/0:30,0:30:52.91:0,53,1137	0/0:38,0:37:73.61:0,74,1584	0/0:36,0:34:66.69:0,67,676	0/0:22,0:20:48.45:0,48,1090	0/0:33,0:28:68.15:0,68,1160	0/0:20,0:16:21.05:0,21,822	0/0:33,0:32:44.60:0,45,910	0/0:15,0:12:17.08:0,17,528	0/0:29,0:29:56.67:0,57,1531	0/0:17,0:16:33.01:0,33,696	0/1:36,1:34:20.42:95,0,20	0/1:34,0:31:11.71:71,0,12	0/0:23,0:22:53.11:0,53,1192	0/1:31,1:22:87.04:114,0,87	1/1:37,2:38:11.79:71,12,0	1/1:38,0:31:4.61:21,5,0	0/0:15,0:14:39.12:0,39,977	0/0:17,0:17:18.02:0,18,431	0/0:47,0:44:67.84:0,68,1624	0/0:27,0:27:29.64:0,30,824	0/0:31,0:31:83.75:0,84,1902	0/0:21,0:20:32.97:0,33,787	0/0:16,0:16:18.13:0,18,387
chr10	21571725	.	TGC	T	68.34	PASS	AB=0.984;AC=9;AF=0.161;AN=56;BaseQRankSum=7.807;DP=748;FS=14.429;HRun=0;HaplotypeScore=139.8873;InbreedingCoeff=0.3544;MQ=49.01;MQ0=27;MQRankSum=-3.522;QD=0.34;ReadPosRankSum=-0.350;VQSLOD=2.0614;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:82.25:0,82,1319	0/1:18,0:17:7.37:9,0,7	0/1:11,0:1:0:0,0,0	0/0:21,0:2:4.61:0,5,18	0/0:21,0:19:29.98:0,30,649	0/0:28,0:28:20.72:0,21,696	0/0:38,0:37:45.19:0,45,1337	0/0:34,0:33:22.39:0,22,949	0/0:23,0:22:45.32:0,45,650	0/0:32,0:27:31.48:0,31,1031	0/0:19,0:15:21.05:0,21,563	0/0:31,0:31:50.76:0,51,652	0/0:14,0:11:19.06:0,19,372	0/0:31,0:30:52.66:0,53,1050	0/0:18,0:17:42.01:0,42,581	0/1:37,2:36:20.78:21,0,64	0/0:35,0:32:21.53:0,22,147	0/0:23,0:23:37.03:0,37,807	0/1:29,0:21:17.28:17,0,129	1/1:38,0:37:11.59:76,12,0	1/1:36,2:33:8.21:46,8,0	0/0:14,0:14:17.01:0,17,549	0/0:17,0:17:21.01:0,21,306	0/0:47,0:44:60.80:0,61,1056	0/1:28,1:29:35.27:35,0,491	0/0:31,0:31:4.56:0,5,1039	0/0:19,0:18:19.58:0,20,479	0/0:15,0:15:2.52:0,3,276
chr10	21571729	.	TGTGC	T	713.39	PASS	AB=0.854;AC=8;AF=0.143;AN=56;BaseQRankSum=7.757;DP=751;FS=0.643;HRun=0;HaplotypeScore=151.8475;InbreedingCoeff=0.2772;MQ=51.08;MQ0=27;MQRankSum=-5.466;QD=3.23;ReadPosRankSum=0.071;VQSLOD=2.4294;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:70.76:0,71,1528	0/1:13,3:15:7.34:51,0,7	0/0:15,0:1:2.60:0,3,10	0/0:24,0:5:9.03:0,9,121	0/0:18,1:17:38.34:0,38,794	0/1:29,0:29:3.19:3,0,1114	0/0:40,0:39:92.84:0,93,1551	0/0:33,0:32:74.51:0,75,946	0/0:23,0:22:46.48:0,46,1036	0/0:32,0:27:77.98:0,78,1292	0/0:19,0:15:21.10:0,21,824	0/0:32,0:32:56.74:0,57,1197	0/0:16,0:13:30.95:0,31,568	0/0:29,0:28:45.11:0,45,1512	0/0:18,0:17:48.06:0,48,941	0/1:20,17:35:9.84:141,0,10	0/1:19,17:33:4.58:240,0,5	0/0:23,0:23:55.91:0,56,1175	0/1:29,1:21:99:142,0,120	1/1:31,6:36:8.24:165,8,0	0/1:34,2:30:3.22:104,0,3	0/0:16,0:16:46.01:0,46,998	0/0:15,0:15:23.97:0,24,443	0/0:49,0:47:59.71:0,60,1719	0/0:28,0:28:45.04:0,45,836	0/0:32,0:32:44.33:0,44,1865	0/0:18,0:17:33.11:0,33,772	0/0:16,0:16:20.71:0,21,443
chr10	21571733	.	CGT	C	234.44	PASS	AB=0.954;AC=15;AF=0.268;AN=56;BaseQRankSum=5.823;DP=759;FS=0.000;HRun=0;HaplotypeScore=131.7654;InbreedingCoeff=-0.2704;MQ=51.33;MQ0=27;MQRankSum=-0.287;QD=0.56;ReadPosRankSum=1.099;VQSLOD=2.2353;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:32,3:35:74.59:75,0,790	1/1:17,0:16:2.89:11,3,0	0/0:15,0:1:3:0,3,27	0/0:29,0:7:17.16:0,17,179	0/0:17,1:16:3.08:0,3,498	0/0:27,1:29:6.27:0,6,765	0/1:37,3:39:37.63:38,0,837	0/1:30,2:31:26.26:26,0,546	0/0:20,3:23:12.18:0,12,652	0/0:29,2:27:18.20:0,18,753	0/0:18,0:15:38.33:0,38,561	0/0:30,1:31:54.18:0,54,829	0/1:14,1:13:35.16:35,0,376	0/0:28,0:28:55.11:0,55,1014	0/0:20,0:19:48.14:0,48,721	0/1:37,0:35:12.66:13,0,19	0/1:33,0:31:22.47:22,0,33	0/1:23,2:25:17.80:18,0,678	0/0:30,0:21:1.43:0,1,86	0/1:36,0:35:12.92:19,0,13	0/1:35,0:29:13.13:13,0,30	0/0:16,1:17:12.67:0,13,660	0/1:15,1:16:11.74:12,0,279	0/1:48,3:51:26.36:26,0,1143	0/1:25,2:27:65.71:66,0,445	0/0:32,0:33:75.39:0,75,1304	0/0:16,0:15:33.08:0,33,496	0/1:16,1:16:10.97:11,0,303
chr10	21572817	.	C	CT	8818.01	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-9.708;DP=597;FS=1.145;HRun=10;HaplotypeScore=54.5465;InbreedingCoeff=0.9490;MQ=69.00;MQ0=0;MQRankSum=-1.470;QD=22.27;ReadPosRankSum=2.553;VQSLOD=5.7350;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,25:33:28.57:683,29,0	0/0:9,0:9:20.97:0,21,172	0/0:7,0:7:3.08:0,3,27	0/0:15,0:14:14.57:0,15,113	1/1:9,33:42:68.56:922,69,0	1/1:3,24:28:41.35:629,41,0	1/1:2,9:12:5.53:246,6,0	0/0:31,3:34:25.91:0,26,625	1/1:2,12:14:27.07:287,27,0	1/1:8,13:21:14.46:359,14,0	1/1:4,14:18:42.07:436,42,0	1/1:5,22:28:56.98:590,57,0	1/1:2,22:24:54.14:575,54,0	1/1:2,14:16:45.11:479,45,0	0/0:29,0:29:74.89:0,75,616	0/0:22,0:23:21.30:0,21,368	0/0:23,1:24:30.88:0,31,455	1/1:1,13:14:39.10:416,39,0	0/0:25,0:24:50.90:0,51,418	0/0:23,0:24:58.90:0,59,468	0/0:9,0:10:26:0,26,203	1/1:3,18:22:53.81:518,54,0	1/1:3,13:17:35.25:410,35,0	1/1:4,13:17:39.10:416,39,0	1/1:4,17:21:20.47:423,20,0	1/1:3,26:30:73.94:761,74,0	1/1:6,18:25:41.94:430,42,0	1/1:5,8:14:23.89:238,24,0
chr10	21573700	.	C	CT	22118.56	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-7.795;DP=613;FS=9.675;HRun=0;HaplotypeScore=60.0197;InbreedingCoeff=0.9935;MQ=80.86;MQ0=0;MQRankSum=-7.034;QD=39.57;ReadPosRankSum=4.201;VQSLOD=4.8530;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,24:24:63.21:963,63,0	1/1:0,13:13:24.08:367,24,0	0/0:17,0:17:51.09:0,51,623	0/0:13,0:13:32.97:0,33,397	1/1:0,30:30:78.26:1193,78,0	1/1:2,28:30:75.15:1118,75,0	1/1:0,15:15:39.13:597,39,0	1/1:1,23:24:69.21:1009,69,0	1/1:0,15:15:45.15:689,45,0	1/1:1,25:26:75.22:1106,75,0	1/1:1,25:26:72.24:1101,72,0	1/1:1,16:17:42.14:643,42,0	1/1:0,20:20:48.16:733,48,0	1/1:1,17:18:42.14:643,42,0	0/0:24,0:24:72.19:0,72,953	1/1:0,25:25:63.21:964,63,0	1/1:1,27:28:66.22:1010,66,0	1/1:0,17:17:48.16:733,48,0	1/1:1,17:18:54.16:801,54,0	1/1:1,27:28:75.25:1138,75,0	1/1:0,24:24:63.21:964,63,0	1/1:0,25:25:60.20:908,60,0	1/1:0,28:28:75.25:1147,75,0	1/1:0,26:26:69.23:1056,69,0	1/1:0,27:27:72.24:1102,72,0	1/1:0,22:22:66.22:989,66,0	1/1:0,22:22:60.20:918,60,0	1/1:0,11:11:15.05:226,15,0
chr10	21576104	.	G	GA	9096.51	PASS	AB=0.667;AC=50;AF=0.893;AN=56;BaseQRankSum=-4.435;DP=562;FS=7.995;HRun=10;HaplotypeScore=65.5601;InbreedingCoeff=0.2655;MQ=63.68;MQ0=6;MQRankSum=-1.273;QD=16.54;ReadPosRankSum=1.638;VQSLOD=5.0980;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,31:38:71:758,71,0	1/1:2,1:5:5.70:46,6,0	0/1:11,1:10:16.66:17,0,121	0/0:12,0:10:22.99:0,23,176	1/1:3,14:18:41.99:410,42,0	0/1:5,12:17:12.25:285,0,12	1/1:10,18:24:47.61:489,48,0	1/1:13,3:33:55.41:353,55,0	1/1:3,13:16:24.06:256,24,0	1/1:6,13:19:17.42:369,17,0	1/1:0,11:11:29.40:284,29,0	1/1:6,19:25:29.50:519,29,0	1/1:4,15:19:11.45:327,11,0	1/1:5,16:21:11.45:327,11,0	1/1:6,1:21:34.17:173,34,0	1/1:2,1:20:42.88:232,43,0	1/1:8,0:32:59.69:299,60,0	1/1:4,30:34:75.19:800,75,0	1/1:7,1:18:37.78:244,38,0	1/1:0,0:16:46.26:264,46,0	0/1:8,0:21:6.04:165,0,6	1/1:2,18:20:48.03:486,48,0	1/1:0,12:13:19.99:199,20,0	0/1:3,17:20:4.16:371,0,4	1/1:6,21:27:48.12:511,48,0	1/1:6,20:26:16.24:515,16,0	1/1:2,12:14:24.06:256,24,0	1/1:0,4:5:14.87:142,15,0
chr10	21577653	.	T	TTATC	10302.27	PASS	AB=0.740;AC=36;AF=0.667;AN=54;BaseQRankSum=-2.612;DP=660;FS=0.487;HRun=0;HaplotypeScore=133.6468;InbreedingCoeff=0.7095;MQ=66.25;MQ0=2;MQRankSum=-3.544;QD=21.83;ReadPosRankSum=-2.378;VQSLOD=4.3223;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:33:21.07:365,21,0	1/1:0,7:6:18.06:423,18,0	0/1:18,0:15:0:0,0,0	./.	1/1:24,0:29:17.09:264,17,0	1/1:10,9:19:9.03:211,9,0	1/1:3,10:14:18.06:423,18,0	1/1:48,0:48:36.08:443,36,0	1/1:5,14:19:39.12:914,39,0	1/1:13,14:28:48.16:1086,48,0	0/1:14,15:30:13.27:663,0,13	0/0:15,0:15:18.04:0,18,256	0/0:25,0:25:33.11:0,33,506	0/0:25,0:25:42.14:0,42,645	1/1:11,0:23:36.12:625,36,0	0/1:11,15:25:7.26:791,0,7	0/0:22,0:22:21.54:0,22,326	1/1:6,11:17:30.10:704,30,0	1/1:9,10:19:30.10:704,30,0	0/1:18,16:32:25.29:803,0,25	1/1:5,6:12:18.06:423,18,0	1/1:16,0:22:21.07:353,21,0	0/0:27,0:27:39.12:0,39,578	0/0:20,0:20:42.14:0,42,643	0/0:34,0:34:48.15:0,48,713	1/1:25,0:25:42.14:695,42,0	1/1:30,0:35:15.05:257,15,0	1/1:4,0:12:9.03:156,9,0
chr10	21578643	.	GT	G	5726.65	PASS	AB=1.000;AC=51;AF=0.911;AN=56;BaseQRankSum=4.338;DP=751;FS=7.050;HRun=1;HaplotypeScore=186.8044;InbreedingCoeff=-0.0970;MQ=83.35;MQ0=0;MQRankSum=-3.274;QD=7.63;ReadPosRankSum=10.362;VQSLOD=1.0545;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:48,0:48:92.79:451,93,0	1/1:11,1:12:4.52:102,5,0	0/1:30,0:26:17:17,0,190	0/1:28,0:27:53.50:53,0,92	1/1:34,1:35:90.17:441,90,0	1/1:28,0:28:55.89:226,56,0	1/1:26,0:26:36.93:211,37,0	0/1:26,0:26:2.72:90,0,3	1/1:23,0:23:13.94:217,14,0	1/1:33,1:34:74.66:312,75,0	1/1:14,0:14:31.28:126,31,0	1/1:26,1:27:41.62:277,42,0	1/1:30,0:30:43.76:249,44,0	1/1:29,1:30:4.14:251,4,0	1/1:23,0:23:46.73:220,47,0	1/1:33,0:33:29.32:256,29,0	1/1:36,0:36:31.71:261,32,0	1/1:31,0:31:53.36:275,53,0	0/1:34,0:34:54.67:133,0,55	1/1:20,0:20:11.60:166,12,0	0/1:26,0:26:18.79:104,0,19	1/1:18,1:19:39.62:187,40,0	1/1:11,0:11:24.05:112,24,0	1/1:28,0:28:25.34:245,25,0	1/1:34,1:35:36.93:289,37,0	1/1:27,0:27:33.76:172,34,0	1/1:25,0:25:17.99:159,18,0	1/1:12,0:12:31.30:124,31,0
chr10	21579384	.	AC	A	2119.21	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=3.310;DP=554;FS=2.444;HRun=1;HaplotypeScore=82.4224;InbreedingCoeff=0.9990;MQ=84.49;MQ0=0;MQRankSum=-2.737;QD=38.53;ReadPosRankSum=-1.383;VQSLOD=3.6460;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:54.18:0,54,861	0/0:12,0:12:33.11:0,33,527	0/0:25,0:25:72.16:0,72,1145	0/0:10,0:10:27.09:0,27,426	0/0:23,0:23:69.22:0,69,1079	0/0:23,0:23:63.19:0,63,982	0/0:21,0:21:60.20:0,60,943	1/1:1,24:25:75.24:1032,75,0	0/0:14,0:14:42.14:0,42,669	0/0:24,0:24:72.25:0,72,1148	0/0:16,0:16:45.14:0,45,692	0/0:19,0:19:57.19:0,57,909	0/0:21,0:21:60.18:0,60,927	0/0:18,0:18:54.17:0,54,835	1/1:3,27:30:90.27:1209,90,0	0/0:26,0:26:75.24:0,75,1174	0/0:18,0:18:54.18:0,54,859	0/0:21,0:21:63.21:0,63,1004	0/0:21,0:21:63.21:0,63,1004	0/0:25,0:25:72.22:0,72,1101	0/0:18,0:18:48.16:0,48,766	0/0:15,0:15:42.11:0,42,622	0/0:14,0:14:39.13:0,39,609	0/0:24,0:24:66.20:0,66,1030	0/0:16,0:16:42.14:0,42,666	0/0:19,0:19:54.18:0,54,856	0/0:26,0:26:72.25:0,72,1150	0/0:11,0:11:30.06:0,30,451
chr10	21579421	.	AGG	A	4223.10	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-8.797;DP=567;FS=10.726;HRun=10;HaplotypeScore=125.2387;InbreedingCoeff=0.9863;MQ=79.53;MQ0=0;MQRankSum=-6.563;QD=25.59;ReadPosRankSum=4.159;VQSLOD=3.3717;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:27.06:0,27,292	1/1:0,8:8:21.06:234,21,0	0/0:23,0:21:32.20:0,32,437	0/0:22,0:23:53.64:0,54,663	0/0:23,0:25:60.10:0,60,624	0/0:27,0:27:42.06:0,42,414	0/0:17,0:17:36.05:0,36,342	1/1:3,29:33:81.13:893,81,0	0/0:20,0:20:42.05:0,42,411	0/0:19,0:19:36.08:0,36,366	0/0:12,0:12:21.04:0,21,225	0/0:18,0:18:30.04:0,30,282	0/0:28,0:30:72.56:0,73,679	0/0:22,0:22:39.05:0,39,366	1/1:4,25:29:72.08:784,72,0	1/1:2,21:23:60.16:668,60,0	1/1:4,19:23:51.13:568,51,0	0/0:20,0:20:39.05:0,39,367	1/1:4,8:12:23.93:241,24,0	1/1:4,15:19:41.48:434,41,0	1/1:3,15:18:36.09:400,36,0	0/0:18,0:18:33.08:0,33,364	0/0:8,0:9:9.49:0,9,87	0/0:20,0:20:36.01:0,36,330	0/0:23,0:23:39.06:0,39,381	0/0:23,0:23:54.13:0,54,601	0/0:29,0:29:48.57:0,49,477	0/0:11,0:11:15.02:0,15,144
chr10	21579431	.	G	GTA	3964.59	PASS	AB=0.747;AC=37;AF=0.661;AN=56;BaseQRankSum=-5.237;DP=566;FS=7.336;HRun=0;HaplotypeScore=133.4081;InbreedingCoeff=0.1405;MQ=80.23;MQ0=0;MQRankSum=0.198;QD=8.11;ReadPosRankSum=0.070;VQSLOD=3.0098;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:2,0:14:4.69:7,0,5	0/1:9,0:9:3.68:14,0,4	0/0:20,0:18:46.82:0,47,625	0/0:25,0:25:68.88:0,69,892	0/1:11,0:23:58.60:94,0,59	1/1:0,0:20:34.37:377,34,0	1/1:0,0:20:24.27:265,24,0	0/1:41,0:41:6.39:53,0,6	1/1:0,0:16:39.08:439,39,0	0/1:0,0:15:3.08:62,0,3	0/1:0,0:16:5.79:69,0,6	1/1:1,1:24:27.24:275,27,0	1/1:5,0:32:61.24:601,61,0	1/1:0,0:23:38.83:413,39,0	0/1:29,0:29:12.17:12,0,29	0/1:25,0:25:0.87:36,0,1	1/1:21,0:21:1.04:9,1,0	1/1:0,0:15:35.22:374,35,0	1/1:15,0:15:5.82:17,6,0	0/1:25,0:25:21.78:42,0,22	1/1:19,0:19:11.22:45,11,0	0/1:1,0:19:19.17:69,0,19	1/1:2,0:10:3.52:32,4,0	1/1:0,0:16:29.05:293,29,0	1/1:0,0:19:32.42:332,32,0	0/1:1,0:23:33.15:36,0,33	0/0:0,0:20:7.02:0,7,19	0/0:1,0:12:3.55:0,4,8
chr10	21579625	.	GT	G	5190.35	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=13.697;DP=689;FS=4.784;HRun=2;HaplotypeScore=64.1119;InbreedingCoeff=0.9999;MQ=85.39;MQ0=0;MQRankSum=-1.019;QD=36.55;ReadPosRankSum=1.123;VQSLOD=5.4984;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:81.26:0,81,1194	1/1:0,14:14:42.14:545,42,0	0/0:37,0:37:99:0,108,1521	0/0:17,0:17:45.15:0,45,661	0/0:27,0:27:81.27:0,81,1214	0/0:26,0:26:72.24:0,72,1078	0/0:15,0:15:42.14:0,42,630	0/0:38,0:38:99:0,114,1692	0/0:20,0:20:60.19:0,60,878	0/0:25,0:25:72.24:0,72,1072	0/0:21,0:21:63.20:0,63,926	0/0:26,0:26:78.26:0,78,1149	0/0:32,0:32:96.28:0,96,1394	0/0:25,0:25:75.25:0,75,1123	0/0:25,0:25:75.25:0,75,1123	1/1:0,26:26:72.23:935,72,0	1/1:0,23:23:60.20:779,60,0	0/0:25,0:25:75.22:0,75,1098	1/1:0,24:24:72.22:922,72,0	1/1:0,30:30:87.28:1130,87,0	1/1:3,22:25:69.20:880,69,0	0/0:22,0:22:66.22:0,66,989	0/0:34,0:34:99:0,102,1508	0/0:20,0:20:60.19:0,60,880	0/0:25,0:25:72.24:0,72,1079	0/0:20,0:20:60.20:0,60,899	0/0:29,0:29:87.28:0,87,1279	0/0:11,0:11:33.11:0,33,494
chr10	21581245	.	TTCTCTCTCTCTCTCTC	T	7701.40	PASS	AB=0.765;AC=27;AF=0.482;AN=56;BaseQRankSum=7.895;DP=643;FS=9.768;HRun=0;HaplotypeScore=268.0709;InbreedingCoeff=0.3728;MQ=60.85;MQ0=14;MQRankSum=-5.333;QD=20.93;ReadPosRankSum=4.670;VQSLOD=1.9523;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:9,0:17:26.43:111,0,26	0/0:13,0:13:9.03:0,9,434	0/0:24,0:17:3.07:0,3,10	0/0:26,0:20:6.02:0,6,87	0/1:11,0:22:17.84:18,0,558	1/1:8,16:24:36.59:1497,37,0	0/1:18,0:21:32.03:83,0,32	0/0:52,0:51:43.39:0,43,2208	1/1:15,6:20:9.03:393,9,0	1/1:13,9:22:21.03:546,21,0	1/1:14,10:24:17.75:469,18,0	1/1:9,1:21:2.12:560,2,0	1/1:17,9:26:21.07:919,21,0	1/1:13,0:18:5.81:143,6,0	0/0:19,0:19:5.98:0,6,288	0/0:26,0:24:26.54:0,27,1661	0/0:23,0:24:32.34:0,32,1808	0/1:9,3:12:52.68:125,0,53	0/0:21,0:21:28.51:0,29,1454	0/0:25,0:24:9.03:0,9,483	0/0:25,0:23:15.05:0,15,1022	0/0:10,0:19:35.67:0,36,585	1/1:9,8:16:14.73:645,15,0	1/1:12,6:18:12.04:524,12,0	1/1:15,17:32:30.53:1186,31,0	0/1:19,2:21:99:107,0,343	0/1:23,0:36:99:321,0,185	0/1:8,0:13:53.86:54,0,55
chr10	21581307	.	TATGTC	T	1987.73	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=4.495;DP=563;FS=0.667;HRun=0;HaplotypeScore=169.4506;InbreedingCoeff=0.9949;MQ=82.76;MQ0=3;MQRankSum=-6.246;QD=55.21;ReadPosRankSum=-3.021;VQSLOD=3.4948;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:27.09:0,27,787	0/0:7,0:7:21.07:0,21,666	0/0:28,0:25:75.26:0,75,2248	0/0:29,0:21:51.14:0,51,1399	0/0:26,0:26:63.22:0,63,2011	0/0:25,0:25:48.16:0,48,1506	0/0:16,0:16:39.13:0,39,1202	1/1:0,19:19:57.12:1101,57,0	0/0:22,0:22:57.20:0,57,1811	0/0:24,0:24:69.18:0,69,1959	0/0:19,0:19:45.15:0,45,1329	0/0:22,0:22:54.17:0,54,1568	0/0:26,0:26:72.25:0,72,2277	0/0:19,0:19:48.15:0,48,1424	1/1:0,17:17:48.16:1008,48,0	0/0:18,0:17:51.18:0,51,1621	0/0:12,0:12:30.10:0,30,969	0/0:9,0:9:21.07:0,21,674	0/0:15,0:15:42.14:0,42,1230	0/0:14,0:14:42.10:0,42,1087	0/0:15,0:14:42.14:0,42,1308	0/0:19,0:19:45.15:0,45,1387	0/0:28,0:28:69.24:0,69,2149	0/0:25,0:25:54.19:0,54,1737	0/0:30,0:30:72.25:0,72,2153	0/0:20,0:20:57.14:0,57,1628	0/0:26,0:26:68.90:0,69,2075	0/0:16,0:16:42.11:0,42,1203
chr10	21583451	.	T	TC	9770.47	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-15.134;DP=924;FS=0.271;HRun=4;HaplotypeScore=160.5013;InbreedingCoeff=0.9999;MQ=87.75;MQ0=0;MQRankSum=-1.990;QD=36.59;ReadPosRankSum=0.074;VQSLOD=2.8464;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,126,1419	1/1:0,11:11:33.11:451,33,0	0/0:33,0:33:76.45:0,76,842	0/0:41,0:41:99:0,110,1156	0/0:43,0:43:99:0,126,1419	0/0:24,0:24:72.16:0,72,786	0/0:28,0:28:84.23:0,84,945	1/1:4,40:44:99:1544,120,0	0/0:32,0:32:90.25:0,90,1020	0/0:29,0:29:75.20:0,75,844	0/0:28,0:28:75.18:0,75,831	0/0:39,0:39:99:0,114,1293	0/0:43,0:43:99:0,126,1410	0/0:51,0:51:99:0,147,1667	1/1:2,37:39:99:1477,108,0	1/1:2,34:36:99:1394,102,0	1/1:1,33:34:90.30:1231,90,0	0/0:23,0:23:69.20:0,69,782	1/1:4,27:31:81.20:1051,81,0	1/1:2,27:29:75.25:1022,75,0	1/1:1,42:43:99:1600,117,0	0/0:38,0:38:99:0,111,1248	0/0:20,0:20:54.15:0,54,612	0/0:39,0:39:99:0,108,1214	0/0:22,0:22:66.10:0,66,732	0/0:33,0:33:93.26:0,93,1055	0/0:33,0:33:93.25:0,93,1045	0/0:14,0:14:33.09:0,33,374
chr10	21583985	.	G	GA	1327.32	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.814;DP=676;FS=1.115;HRun=9;HaplotypeScore=110.3062;InbreedingCoeff=0.9347;MQ=80.73;MQ0=0;MQRankSum=-0.361;QD=20.74;ReadPosRankSum=-3.216;VQSLOD=2.0587;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:45:99:0,110,925	0/0:15,0:15:41.96:0,42,361	0/0:16,0:16:5.40:0,5,202	0/0:20,0:20:26:0,26,212	0/0:32,1:33:49.62:0,50,625	0/0:33,0:33:86.85:0,87,741	0/0:19,0:19:53.79:0,54,443	1/1:11,25:38:85.08:856,85,0	0/0:18,0:18:41.98:0,42,365	0/0:34,0:35:88.65:0,89,736	0/0:20,0:20:44.98:0,45,390	0/0:30,0:30:83.94:0,84,721	0/0:17,0:17:38.89:0,39,328	0/0:23,0:23:65.97:0,66,569	1/1:6,20:26:55.39:593,55,0	0/0:24,0:24:62.97:0,63,543	0/0:35,0:35:98.98:0,99,859	0/0:16,0:16:41.88:0,42,350	0/0:17,0:17:44.96:0,45,386	0/0:16,0:17:50.03:0,50,423	0/0:17,0:17:47.97:0,48,412	0/0:21,1:24:21.88:0,22,395	0/0:16,0:16:44.98:0,45,391	0/0:23,0:23:68.97:0,69,595	0/0:37,0:37:87.80:0,88,777	0/0:34,0:34:89.80:0,90,764	0/0:19,0:19:56.95:0,57,485	0/0:7,0:7:16.16:0,16,123
chr10	21586127	.	T	TC	931.77	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=1.347;DP=509;FS=4.736;HRun=6;HaplotypeScore=54.0118;InbreedingCoeff=0.9618;MQ=73.29;MQ0=0;MQRankSum=-1.496;QD=20.26;ReadPosRankSum=-2.149;VQSLOD=2.6328;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:51.10:0,51,514	0/0:7,0:7:18.04:0,18,184	0/0:16,0:11:27.03:0,27,261	0/0:22,0:20:31.42:0,31,285	0/0:34,0:34:93.14:0,93,930	0/0:24,0:24:60.12:0,60,606	0/0:20,0:20:48.09:0,48,483	1/1:13,17:30:48.15:601,48,0	0/0:8,0:8:21.05:0,21,214	0/0:21,0:21:60.13:0,60,609	0/0:27,0:27:81.18:0,81,826	0/0:16,0:16:45.09:0,45,453	0/0:20,0:20:54.10:0,54,543	0/0:15,0:15:45.10:0,45,459	1/1:3,13:16:36.12:452,36,0	0/0:9,0:9:24.04:0,24,239	0/0:22,0:22:55.60:0,56,571	0/0:11,0:11:24:0,24,233	0/0:17,0:17:33.54:0,34,338	0/0:17,0:17:48.11:0,48,489	0/0:4,0:4:9.02:0,9,92	0/0:11,0:11:33.07:0,33,337	0/0:13,0:13:39.09:0,39,398	0/0:20,0:20:51.11:0,51,520	0/0:22,0:22:63.13:0,63,637	0/0:25,0:25:72.14:0,72,723	0/0:27,0:25:72.16:0,72,734	0/0:13,0:13:39.07:0,39,390
chr10	21586136	.	G	GCT	722.23	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=3.407;DP=497;FS=0.834;HRun=0;HaplotypeScore=62.6244;InbreedingCoeff=0.9175;MQ=70.09;MQ0=0;MQRankSum=-1.237;QD=22.57;ReadPosRankSum=-1.209;VQSLOD=3.4247;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:54.16:0,54,648	0/0:6,0:6:12.04:0,12,147	0/0:20,0:12:8.74:0,9,96	0/0:18,0:16:28.37:0,28,238	0/0:32,0:32:84.23:0,84,994	0/0:21,0:21:48.11:0,48,542	0/0:21,0:21:54.14:0,54,635	1/1:16,4:20:26.99:333,27,0	0/0:9,0:9:24.08:0,24,293	0/0:24,0:24:48.12:0,48,557	0/0:31,0:32:81.03:0,81,921	0/0:16,0:16:39.11:0,39,464	0/0:16,0:16:33.10:0,33,403	0/0:16,0:16:42.11:0,42,493	1/1:2,10:12:33.10:510,33,0	0/0:8,0:8:21.07:0,21,257	0/0:22,0:23:56.95:0,57,645	0/0:11,0:11:21.06:0,21,255	0/0:16,0:16:36.11:0,36,430	0/0:17,0:17:48.13:0,48,566	0/0:3,0:3:9.03:0,9,110	0/0:13,0:13:39.11:0,39,466	0/0:14,0:14:30.09:0,30,367	0/0:18,0:18:18.12:0,18,436	0/0:20,0:21:53.97:0,54,614	0/0:26,0:26:72.19:0,72,837	0/0:27,0:25:75.22:0,75,905	0/0:13,0:13:33.10:0,33,401
chr10	21586339	.	GT	G	9016.69	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-2.614;DP=562;FS=9.127;HRun=12;HaplotypeScore=56.1782;InbreedingCoeff=0.7748;MQ=68.57;MQ0=0;MQRankSum=-2.490;QD=16.51;ReadPosRankSum=1.987;VQSLOD=5.8119;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,20:23:53.79:418,54,0	1/1:1,5:6:8.94:70,9,0	0/0:11,0:11:14.75:0,15,113	0/0:5,0:5:3:0,3,27	1/1:6,16:22:38.80:302,39,0	1/1:2,29:32:79.74:610,80,0	1/1:1,21:22:50.81:395,51,0	1/1:11,36:49:99:803,106,0	1/1:3,11:14:26.89:209,27,0	1/1:5,26:32:49.26:556,49,0	1/1:4,25:30:70.61:527,71,0	1/1:5,13:19:8.36:243,8,0	1/1:2,22:24:56.78:441,57,0	1/1:3,10:13:26.88:209,27,0	1/1:2,14:16:8.41:248,8,0	1/1:1,9:10:23.91:186,24,0	1/1:4,22:26:62.75:487,63,0	1/1:4,10:14:23.87:186,24,0	1/1:6,17:24:39.33:376,39,0	1/1:9,19:29:58.69:440,59,0	1/1:1,6:7:17.93:139,18,0	1/1:5,15:20:44.81:348,45,0	1/1:8,14:23:10.41:254,10,0	1/1:1,6:7:17.93:139,18,0	1/1:4,12:16:34.90:261,35,0	1/1:3,21:24:56.71:435,57,0	1/1:4,26:30:38.30:480,38,0	1/1:3,11:14:32.87:255,33,0
chr10	21588477	.	CGTGTGTGT	C	883.47	PASS	AB=0.866;AC=20;AF=0.400;AN=50;BaseQRankSum=3.913;DP=589;FS=3.797;HRun=0;HaplotypeScore=172.2418;InbreedingCoeff=0.4629;MQ=73.09;MQ0=12;MQRankSum=-4.814;QD=3.89;ReadPosRankSum=1.088;VQSLOD=2.5888;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:32:2.27:0,2,23	0/0:5,0:5:6.02:0,6,187	./.	0/0:42,0:26:0:0,0,0	1/1:9,7:16:5.99:111,6,0	0/1:21,3:24:17.45:60,0,17	1/1:17,0:19:2.99:24,3,0	1/1:25,0:25:3.37:17,3,0	0/0:16,1:19:0.47:0,0,1	0/0:18,0:18:3.06:0,3,8	1/1:7,5:13:3.01:56,3,0	./.	1/1:23,5:28:11.99:278,12,0	1/1:12,0:15:5.60:94,6,0	0/0:19,0:21:27.09:0,27,902	0/0:17,0:17:27.08:0,27,784	0/0:22,0:21:27.09:0,27,956	0/1:22,5:27:31.34:208,0,31	0/0:21,0:20:21.07:0,21,713	0/0:10,0:10:9.03:0,9,250	0/0:28,0:28:12.04:0,12,424	./.	1/1:7,4:13:6.02:112,6,0	1/1:20,3:23:0.47:1,0,0	1/1:14,10:24:3.01:74,3,0	0/0:10,0:10:3.89:0,4,30	0/0:21,0:30:20.81:0,21,184	0/0:11,0:13:5.99:0,6,49
chr10	21589426	.	T	TAC	2075.62	PASS	AB=1.000;AC=14;AF=0.250;AN=56;BaseQRankSum=3.254;DP=524;FS=15.469;HRun=0;HaplotypeScore=103.1332;InbreedingCoeff=0.7286;MQ=64.80;MQ0=8;MQRankSum=0.060;QD=14.31;ReadPosRankSum=-2.990;VQSLOD=1.8436;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:50.80:0,51,644	1/1:7,0:7:15.05:238,15,0	0/0:29,0:15:28.92:0,29,364	0/0:30,0:21:60.20:0,60,800	0/1:14,0:14:2:2,0,217	0/0:14,0:14:29.50:0,29,327	0/0:21,0:21:16.70:0,17,410	0/0:27,0:26:58.87:0,59,759	0/0:10,0:10:13.21:0,13,165	0/0:18,0:17:40.52:0,41,493	0/0:10,0:10:8.13:0,8,160	0/0:22,0:22:28.29:0,28,350	0/0:16,0:16:17.55:0,18,267	0/0:15,0:15:23.52:0,24,265	0/0:20,0:20:44.03:0,44,463	1/1:32,4:35:57.96:1104,58,0	1/1:4,17:22:18.01:232,18,0	0/0:25,0:24:49.08:0,49,616	1/1:1,10:11:30.05:413,30,0	1/1:9,2:11:12.02:162,12,0	1/1:7,22:29:8.94:93,9,0	0/1:14,0:14:12.32:12,0,259	0/0:6,0:6:9.03:0,9,119	0/0:34,0:34:0.61:0,1,432	0/0:12,0:12:4.33:0,4,136	0/0:20,0:20:34.49:0,34,512	0/0:15,0:14:29.68:0,30,362	0/0:4,0:4:11.71:0,12,131
chr10	21589480	.	ACG	A	1861.26	PASS	AB=1.000;AC=12;AF=0.214;AN=56;BaseQRankSum=-1.411;DP=674;FS=5.353;HRun=0;HaplotypeScore=109.8607;InbreedingCoeff=0.7220;MQ=67.72;MQ0=8;MQRankSum=-0.460;QD=12.41;ReadPosRankSum=-0.903;VQSLOD=3.1569;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:52.61:0,53,374	1/1:7,0:7:0.11:83,0,0	0/0:30,0:20:45.78:0,46,438	0/0:31,0:23:56.22:0,56,511	0/0:26,0:26:53.58:0,54,411	0/0:16,0:17:13.71:0,14,229	0/0:24,0:23:37.62:0,38,289	0/0:25,0:24:58.47:0,58,463	0/0:22,0:22:32.42:0,32,255	0/0:28,0:27:56.94:0,57,464	0/1:11,0:11:2.10:2,0,140	0/0:29,0:29:39.83:0,40,332	0/0:27,0:27:18.59:0,19,266	0/0:22,0:22:32.31:0,32,249	0/0:24,0:22:32.44:0,32,246	0/1:34,0:32:46.63:360,0,47	1/1:30,0:30:27.71:347,28,0	0/0:19,0:17:25.69:0,26,297	1/1:13,4:17:25.30:360,25,0	1/1:16,0:16:8.79:276,9,0	1/1:35,0:34:62.46:598,62,0	0/0:26,0:26:50.04:0,50,439	0/0:15,0:15:26.88:0,27,210	0/0:30,0:30:22.17:0,22,320	0/0:29,0:29:64.85:0,65,520	0/0:38,0:36:87.43:0,87,816	0/0:26,0:25:47.97:0,48,361	0/0:4,0:3:5.98:0,6,57
chr10	21591501	.	AT	A	12808.84	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-0.881;DP=614;FS=29.398;HRun=10;HaplotypeScore=124.7829;InbreedingCoeff=0.9138;MQ=79.62;MQ0=0;MQRankSum=-4.883;QD=22.05;ReadPosRankSum=4.582;VQSLOD=3.6133;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,20:20:53.99:469,54,0	1/1:1,7:8:17.99:156,18,0	0/0:19,1:20:6.89:0,7,264	0/0:13,0:13:9.14:0,9,160	1/1:3,30:33:53.75:696,54,0	1/1:5,25:30:74.97:651,75,0	1/1:1,13:14:35.99:313,36,0	1/1:5,26:31:77.96:674,78,0	1/1:1,20:21:36.27:448,36,0	1/1:2,32:34:95.98:834,96,0	1/1:2,22:24:56.96:494,57,0	1/1:3,13:16:38.99:339,39,0	1/1:1,26:28:74.02:631,74,0	1/1:1,21:22:62.99:547,63,0	1/1:4,22:26:62.74:547,63,0	1/1:3,17:20:50.96:443,51,0	1/1:3,21:24:56.98:495,57,0	1/1:4,13:17:35.94:305,36,0	1/1:2,15:17:44.96:388,45,0	1/1:5,31:37:88.99:761,89,0	1/1:0,13:13:38.99:339,39,0	1/1:1,19:20:53.98:469,54,0	1/1:3,22:25:62.97:547,63,0	1/1:0,19:19:56.99:495,57,0	1/1:4,10:14:26.98:234,27,0	1/1:2,24:26:71.98:625,72,0	1/1:7,27:34:80.96:703,81,0	1/1:0,8:8:24:208,24,0
chr10	21591898	.	G	GA	9206.29	PASS	AB=0.917;AC=39;AF=0.696;AN=56;BaseQRankSum=8.938;DP=504;FS=14.398;HRun=8;HaplotypeScore=94.1682;InbreedingCoeff=0.8912;MQ=76.11;MQ0=0;MQRankSum=-10.216;QD=27.00;ReadPosRankSum=-0.485;VQSLOD=3.5676;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,7:11:24.03:262,24,0	0/0:14,0:14:24:0,24,220	0/0:23,0:20:32.67:0,33,283	0/0:15,0:12:3.43:0,3,73	1/1:5,28:33:78.09:851,78,0	1/1:2,23:25:66.16:747,66,0	1/1:6,10:16:41.98:430,42,0	0/0:28,1:29:66.01:0,66,601	1/1:3,11:14:36.10:414,36,0	1/1:6,15:21:42.12:478,42,0	1/1:5,14:19:41.86:481,42,0	1/1:3,14:17:39.03:450,39,0	1/1:1,16:18:50.98:568,51,0	1/1:5,15:20:51.14:579,51,0	1/1:0,11:11:33.10:381,33,0	0/0:23,0:23:63.02:0,63,577	0/0:26,0:26:60.03:0,60,549	1/1:4,5:9:12:125,12,0	0/1:10,1:11:4.60:5,0,217	0/0:21,0:21:57.02:0,57,522	0/0:12,0:12:29.99:0,30,269	1/1:2,14:16:45.13:517,45,0	1/1:6,18:24:60.12:668,60,0	1/1:1,6:6:12.04:138,12,0	1/1:3,11:14:33.57:382,34,0	1/1:5,22:27:72.13:812,72,0	1/1:4,21:25:72.17:815,72,0	1/1:0,3:3:9.03:104,9,0
chr10	21591921	.	T	TTC	12792.62	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=10.260;DP=438;FS=7.260;HRun=0;HaplotypeScore=85.7865;InbreedingCoeff=0.9425;MQ=69.38;MQ0=1;MQRankSum=-11.360;QD=45.04;ReadPosRankSum=2.637;VQSLOD=6.2833;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,6:7:18.05:288,18,0	0/0:9,0:9:27.08:0,27,392	0/0:18,0:15:23.35:0,23,249	0/0:12,0:9:3.39:0,3,47	1/1:6,28:33:90.26:1478,90,0	1/1:6,19:25:72.13:1125,72,0	1/1:4,6:11:29.94:402,30,0	0/0:35,0:35:87.26:0,87,1230	1/1:1,8:9:24.08:419,24,0	1/1:5,12:17:42.13:689,42,0	1/1:1,17:18:54.18:944,54,0	1/1:1,13:14:39.05:648,39,0	1/1:3,13:16:45.01:719,45,0	1/1:4,17:21:63.20:1019,63,0	1/1:2,7:9:24.06:401,24,0	0/0:23,0:23:69.22:0,69,1024	0/0:22,0:22:51.13:0,51,696	1/1:3,2:5:15.03:195,15,0	0/0:11,0:11:33.07:0,33,442	0/0:18,0:18:51.15:0,51,743	0/0:6,0:6:18.05:0,18,254	1/1:4,10:14:41.85:614,42,0	1/1:5,15:20:54.16:870,54,0	1/1:1,3:3:9.03:157,9,0	1/1:3,13:16:48.14:767,48,0	1/1:7,14:21:60.11:879,60,0	1/1:1,19:21:63.16:1072,63,0	1/1:0,2:2:6.02:105,6,0
chr10	21591981	.	A	AAAAAAAG	4345.30	PASS	AB=0.970;AC=26;AF=0.464;AN=56;BaseQRankSum=2.651;DP=524;FS=15.633;HRun=0;HaplotypeScore=141.2755;InbreedingCoeff=-0.0218;MQ=55.86;MQ0=17;MQRankSum=-2.252;QD=12.89;ReadPosRankSum=0.587;VQSLOD=3.2087;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:7,0:7:12.57:68,0,13	0/0:9,0:9:23.74:0,24,297	0/0:61,0:11:2.78:0,3,113	0/0:32,0:11:5.54:0,6,100	0/1:33,0:32:99:176,0,201	1/1:25,2:28:11.39:650,11,0	0/1:4,0:5:3.68:92,0,4	0/0:33,0:33:62.02:0,62,531	0/1:12,0:12:4.37:233,0,4	1/1:27,3:31:38.35:651,38,0	0/1:16,3:20:15.95:416,0,16	1/1:12,0:12:0.97:54,1,0	0/1:16,0:16:12.48:134,0,12	0/1:21,0:21:42.96:328,0,43	0/1:9,0:9:46.27:92,0,46	0/0:15,0:15:11.44:0,11,196	0/0:10,0:10:12.02:0,12,148	1/1:7,1:8:14.33:214,14,0	0/1:14,0:14:1.26:1,0,130	0/0:23,0:23:33.56:0,34,315	0/0:4,0:4:8.79:0,9,65	0/1:11,0:11:57.79:74,0,58	1/1:21,0:20:40.94:329,41,0	1/1:7,0:7:14.05:170,14,0	0/1:25,0:26:24.03:333,0,24	0/1:22,0:22:29.63:171,0,30	0/1:21,0:21:48.30:48,0,110	0/1:9,0:9:39.56:110,0,40
chr10	21591990	.	GA	G	3059.29	PASS	AB=0.730;AC=30;AF=0.536;AN=56;BaseQRankSum=2.053;DP=525;FS=27.015;HRun=19;HaplotypeScore=85.2875;InbreedingCoeff=0.1748;MQ=58.78;MQ0=15;MQRankSum=-0.682;QD=8.59;ReadPosRankSum=5.711;VQSLOD=0.9592;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,0:6:5.83:34,6,0	0/0:8,0:8:14.62:0,15,146	0/0:53,0:12:6.25:0,6,144	0/0:32,0:12:2.67:0,3,45	1/1:17,15:32:13.50:297,13,0	0/1:15,10:25:15.89:315,0,16	1/1:3,2:5:5.76:47,6,0	1/1:11,20:31:20.51:401,21,0	0/1:6,6:12:13.02:105,0,13	1/1:20,11:31:1.91:321,2,0	0/1:14,6:20:5.34:159,0,5	1/1:9,4:13:3.29:136,3,0	0/1:13,4:17:14.89:121,0,15	0/1:13,9:21:55.91:118,0,56	0/1:7,3:10:7.20:45,0,7	0/0:13,0:13:17.43:0,17,116	0/0:14,0:14:20.86:0,21,201	0/1:3,4:6:2.20:83,0,2	0/0:16,0:16:27.33:0,27,276	0/0:28,0:28:20.23:0,20,424	0/0:5,0:5:11.98:0,12,115	1/1:6,5:11:4.61:115,5,0	1/1:8,15:21:13.68:208,14,0	1/1:2,7:8:8.04:76,8,0	0/1:17,11:28:51.58:131,0,52	1/1:8,15:23:10.28:320,10,0	0/1:15,7:22:30.05:80,0,30	0/1:6,3:9:26.15:128,0,26
chr10	21591991	.	A	AAAAAAAG	3729.60	PASS	AB=0.994;AC=25;AF=0.446;AN=56;BaseQRankSum=6.225;DP=527;FS=48.753;HRun=0;HaplotypeScore=157.4892;InbreedingCoeff=-0.1899;MQ=59.98;MQ0=15;MQRankSum=-0.709;QD=9.59;ReadPosRankSum=5.424;VQSLOD=0.8776;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:3,3:7:0.09:102,0,0	0/0:8,0:8:19.31:0,19,391	0/0:54,0:14:6.95:0,7,188	0/1:31,0:12:0.12:0,0,114	0/1:32,0:31:75.16:179,0,75	0/1:24,0:25:4.77:391,0,5	0/1:5,0:5:6.28:113,0,6	0/1:30,0:30:42.81:43,0,151	0/1:12,0:12:2.09:141,0,2	0/1:31,0:31:10.37:590,0,10	0/1:20,0:20:21.24:335,0,21	0/1:13,0:13:14.40:68,0,14	0/1:17,0:17:33.76:144,0,34	0/1:23,0:22:71.34:212,0,71	0/1:10,0:10:18.05:167,0,18	0/0:13,0:13:22.88:0,23,262	0/0:14,0:14:20.93:0,21,288	1/1:7,0:6:1.72:138,2,0	0/0:17,0:17:38.16:0,38,523	0/0:27,0:27:59.11:0,59,764	0/0:5,0:5:14.87:0,15,183	0/1:11,0:11:5.35:41,0,5	0/1:23,0:21:11.11:135,0,11	1/1:9,0:8:10.47:97,10,0	0/1:27,0:28:44.05:233,0,44	1/1:23,0:23:16.63:342,17,0	0/1:22,0:22:36.05:173,0,36	0/1:9,0:9:27.03:84,0,27
chr10	21592939	.	T	TTCTATCC	684.49	PASS	AB=0.924;AC=13;AF=0.232;AN=56;BaseQRankSum=6.665;DP=651;FS=4.163;HRun=0;HaplotypeScore=186.9003;InbreedingCoeff=0.0892;MQ=51.93;MQ0=18;MQRankSum=3.431;QD=3.85;ReadPosRankSum=-2.604;VQSLOD=2.0054;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:17:11.83:0,12,290	0/0:11,0:11:30.10:0,30,708	0/0:9,0:5:15.03:0,15,314	0/0:11,0:8:14.35:0,14,221	0/1:17,0:20:56.70:57,0,163	0/0:25,0:25:3.82:0,4,733	0/1:14,0:13:0.06:0,0,210	0/0:95,0:75:99:0,212,4095	1/1:1,1:11:6.02:167,6,0	0/1:16,0:18:99:142,0,159	0/1:15,0:17:93.46:161,0,93	0/0:14,0:13:12.87:0,13,381	0/1:20,0:16:26.12:26,0,287	0/1:20,0:19:4:4,0,546	0/1:10,0:10:6.35:6,0,81	0/0:17,0:16:45.13:0,45,975	0/0:15,0:15:12.15:0,12,877	0/1:8,0:12:79.27:98,0,79	0/0:38,0:34:93.20:0,93,1882	0/0:30,0:30:70.91:0,71,1486	0/0:40,0:40:74.42:0,74,1647	0/0:12,0:12:35.90:0,36,452	0/0:23,0:23:14.74:0,15,652	0/1:9,0:9:12.72:13,0,114	1/1:0,0:23:18.01:161,18,0	0/0:39,0:36:49.39:0,49,1296	0/0:51,0:51:94.74:0,95,1821	0/0:23,0:23:53.91:0,54,847
chr10	21593034	.	CTAT	C	2944.06	PASS	AB=0.689;AC=26;AF=0.500;AN=52;BaseQRankSum=5.701;DP=543;FS=20.140;HRun=0;HaplotypeScore=151.1346;InbreedingCoeff=-0.1075;MQ=36.35;MQ0=34;MQRankSum=-1.833;QD=7.09;ReadPosRankSum=-5.053;VQSLOD=-0.4989;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:10,2:9:34.85:35,0,85	0/0:11,0:11:33.11:0,33,777	./.	./.	0/1:15,8:19:93.81:94,0,129	1/1:16,15:24:23.34:229,23,0	0/0:12,6:13:3.96:0,4,26	0/1:13,1:32:99:268,0,214	1/1:4,13:13:17.58:276,18,0	0/1:4,7:7:32.29:32,0,209	0/1:7,13:13:49.92:78,0,50	1/1:3,15:11:17.15:249,17,0	0/1:9,23:21:99:251,0,151	1/1:5,15:16:17.26:275,17,0	1/1:17,8:17:28.05:280,28,0	0/1:36,0:31:83.53:84,0,1290	0/0:26,0:25:1.89:0,2,848	0/1:7,4:7:12.44:115,0,12	0/0:20,1:16:0.62:0,1,793	0/0:18,0:18:48.13:0,48,1075	0/0:18,0:18:44.95:0,45,946	0/1:3,3:5:0:0,0,0	0/1:6,8:9:6.51:90,0,7	0/1:9,2:10:48.13:48,0,72	0/1:6,11:12:49.05:95,0,49	0/1:9,14:15:99:298,0,218	0/1:15,24:28:99:171,0,243	1/1:4,2:5:11.99:139,12,0
chr10	21593045	.	CTATCT	C	2541.65	PASS	AB=0.725;AC=27;AF=0.519;AN=52;BaseQRankSum=4.336;DP=534;FS=3.840;HRun=0;HaplotypeScore=173.1422;InbreedingCoeff=0.1743;MQ=35.40;MQ0=29;MQRankSum=-1.885;QD=7.16;ReadPosRankSum=-6.832;VQSLOD=0.4425;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:11,2:8:53.62:54,0,107	0/0:10,0:10:30.10:0,30,890	./.	./.	0/1:16,8:19:99:170,0,178	1/1:14,10:21:14.61:144,15,0	0/1:14,4:12:11.43:34,0,11	0/0:41,0:32:52.96:0,53,652	1/1:4,10:12:19.25:263,19,0	0/1:7,7:10:99:111,0,179	0/1:8,7:12:11.06:36,0,11	1/1:4,11:10:17.72:185,18,0	0/1:11,18:19:99:196,0,180	1/1:9,9:17:22.96:302,23,0	1/1:16,2:10:7.08:68,7,0	0/0:27,0:27:57.19:0,57,1898	0/0:29,0:28:61.39:0,61,1383	0/1:7,3:7:40.45:97,0,40	0/0:20,0:16:45.15:0,45,1133	0/0:17,0:17:44.95:0,45,1484	0/0:15,0:15:35.89:0,36,1057	0/1:3,3:5:0:0,0,0	1/1:8,8:11:14.36:130,14,0	0/1:10,2:11:84.77:116,0,85	1/1:9,10:14:11.62:121,12,0	0/1:16,11:21:99:528,0,292	0/1:17,20:29:62:62,0,217	1/1:2,2:5:6.02:105,6,0
chr10	21593060	.	TCCATC	T	794.44	PASS	AB=0.883;AC=7;AF=0.135;AN=52;BaseQRankSum=6.734;DP=556;FS=0.000;HRun=0;HaplotypeScore=174.7840;InbreedingCoeff=0.0417;MQ=38.08;MQ0=26;MQRankSum=-7.594;QD=5.48;ReadPosRankSum=1.925;VQSLOD=2.6502;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:11:16.24:0,16,343	0/0:7,0:7:21.07:0,21,652	./.	./.	0/0:22,0:18:36.12:0,36,812	0/0:29,1:23:31.42:0,31,432	0/0:12,0:8:11.74:0,12,199	0/0:47,0:33:92.54:0,93,1474	0/0:16,0:13:18.98:0,19,301	0/0:20,0:16:19.47:0,19,878	0/0:21,0:15:14.36:0,14,277	0/0:19,0:12:19.67:0,20,368	0/0:34,0:22:10.34:0,10,518	0/0:23,0:19:30.79:0,31,551	0/1:17,3:13:65.01:65,0,195	0/0:28,0:27:66.70:0,67,2049	0/0:22,0:22:43.35:0,43,1114	0/1:12,0:10:50.49:50,0,251	0/0:15,0:13:32.69:0,33,810	0/0:19,0:18:50.97:0,51,1590	0/0:16,0:16:38.90:0,39,1039	0/0:6,1:6:6.01:0,6,77	0/0:14,0:9:12.04:0,12,235	0/0:11,0:10:16.30:0,16,372	0/1:18,4:17:99:122,0,105	0/1:38,2:32:99:208,0,896	0/1:36,5:33:36.79:345,0,37	1/1:3,2:4:2.13:127,2,0
chr10	21593070	.	TATC	T	756.89	PASS	AB=0.898;AC=7;AF=0.135;AN=52;BaseQRankSum=7.636;DP=588;FS=6.173;HRun=0;HaplotypeScore=166.7212;InbreedingCoeff=0.1405;MQ=40.25;MQ0=24;MQRankSum=-7.044;QD=4.88;ReadPosRankSum=2.491;VQSLOD=2.4404;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:15:24.93:0,25,503	0/0:6,0:6:18.06:0,18,321	./.	./.	0/0:26,0:22:48.16:0,48,990	0/0:27,1:22:36.07:0,36,587	0/0:13,0:9:11.83:0,12,242	0/0:56,0:36:81.59:0,82,1318	0/0:17,0:15:26.57:0,27,458	0/0:22,0:18:39.07:0,39,898	0/0:22,0:18:26.95:0,27,585	0/0:19,0:13:22.31:0,22,411	0/0:34,0:23:20.04:0,20,584	0/0:21,0:18:32.35:0,32,596	0/1:18,3:16:26.90:27,0,143	0/0:25,0:24:66.22:0,66,1199	0/0:26,0:26:37.29:0,37,546	0/0:13,0:10:24.19:0,24,393	0/1:13,0:12:37.55:38,0,373	0/0:23,0:22:56.23:0,56,1079	0/0:14,0:14:32.94:0,33,665	0/0:7,1:6:7.90:0,8,56	0/0:17,0:13:21.01:0,21,464	0/0:16,0:15:20.97:0,21,446	0/1:21,4:20:86.79:87,0,91	0/1:37,2:31:65.75:66,0,606	1/1:49,0:38:11.24:538,11,0	0/1:6,2:6:25.99:133,0,26
chr10	21593073	.	C	CATCT	3035.45	PASS	AB=0.800;AC=14;AF=0.269;AN=52;BaseQRankSum=0.160;DP=605;FS=23.480;HRun=0;HaplotypeScore=173.7734;InbreedingCoeff=0.5378;MQ=41.19;MQ0=21;MQRankSum=-3.813;QD=11.08;ReadPosRankSum=0.259;VQSLOD=1.6607;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:15:22.67:0,23,302	0/0:6,0:6:3.01:0,3,46	./.	./.	0/0:26,0:22:42.14:0,42,642	0/1:26,3:23:99:266,0,316	0/0:13,0:10:12.03:0,12,164	1/1:57,0:37:8.92:71,9,0	0/0:18,0:16:27.09:0,27,409	0/0:24,0:20:39.11:0,39,561	0/0:23,0:19:30.10:0,30,456	0/0:18,0:12:21.07:0,21,311	0/0:34,0:23:27.06:0,27,416	0/0:20,0:17:30.06:0,30,437	1/1:11,11:18:27.09:630,27,0	0/0:26,0:25:24.17:0,24,391	0/1:16,9:26:59.55:128,0,60	0/0:12,0:10:14.33:0,14,228	0/0:13,0:13:8.94:0,9,120	0/0:24,0:23:28.90:0,29,480	0/0:12,0:15:24.03:0,24,304	1/1:5,3:6:6.01:141,6,0	0/0:16,0:13:20.91:0,21,324	0/0:13,0:14:18.02:0,18,278	1/1:14,12:25:18.06:388,18,0	0/1:25,14:33:27.49:1055,0,27	1/1:26,1:38:28.44:428,28,0	0/1:8,0:8:8.81:101,0,9
chr10	21594174	.	G	GATATATATATA	2291.30	PASS	AB=0.745;AC=19;AF=0.380;AN=50;BaseQRankSum=6.569;DP=188;FS=1.569;HRun=0;HaplotypeScore=62.7533;InbreedingCoeff=-0.0604;MQ=71.74;MQ0=1;MQRankSum=-6.796;QD=30.96;ReadPosRankSum=2.372;VQSLOD=2.6963;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:2,1:4:31.33:192,0,31	./.	0/0:6,0:4:10.78:0,11,84	0/0:9,0:6:6.84:0,7,62	0/1:4,0:4:14.94:15,0,73	0/1:2,0:5:31.81:162,0,32	./.	0/0:44,0:45:99:0,135,3734	0/1:2,0:4:71.90:103,0,72	0/1:2,0:5:57.13:123,0,57	0/0:2,0:2:3.01:0,3,41	0/1:4,0:3:31.83:84,0,32	0/1:2,0:5:69.65:153,0,70	1/1:1,0:6:9.03:219,9,0	0/0:2,0:2:6.02:0,6,81	0/0:4,0:4:9.03:0,9,264	0/0:14,0:14:42.14:0,42,1350	0/1:3,0:13:19.47:597,0,19	0/0:20,0:20:54.16:0,54,1515	0/0:1,0:1:3.01:0,3,41	0/0:11,0:11:29.99:0,30,887	./.	0/1:2,0:2:16.96:17,0,35	0/1:2,0:3:13.95:62,0,14	1/1:0,0:5:9.03:284,9,0	0/1:3,0:6:66.73:102,0,67	1/1:1,0:4:6.02:144,6,0	1/1:0,0:4:9.03:195,9,0
chr10	21594542	.	CT	C	1803.89	PASS	AB=0.722;AC=29;AF=0.518;AN=56;BaseQRankSum=9.894;DP=188;FS=1.979;HRun=4;HaplotypeScore=21.6124;InbreedingCoeff=-0.2325;MQ=68.75;MQ0=0;MQRankSum=-10.355;QD=11.71;ReadPosRankSum=-2.737;VQSLOD=0.0390;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:7,1:8:14.87:15,0,231	1/1:0,4:4:12.04:144,12,0	0/1:4,1:5:55.24:55,0,59	0/0:2,0:2:6.01:0,6,71	0/1:3,7:10:95.94:221,0,96	0/1:6,2:8:47.77:48,0,228	0/1:1,2:3:29.95:30,0,36	0/1:28,6:34:99:119,0,995	1/1:0,2:2:6.02:69,6,0	1/1:0,3:3:9.03:108,9,0	0/1:2,1:3:26.91:27,0,75	0/1:1,2:3:33:63,0,33	0/1:4,1:5:20.92:21,0,135	0/0:2,0:2:6.01:0,6,67	1/1:0,1:1:3.01:36,3,0	0/0:3,0:3:6.02:0,6,84	0/0:13,1:14:6.18:0,6,509	0/0:11,0:11:33.11:0,33,462	0/1:8,6:14:99:174,0,279	0/1:1,4:5:26.97:129,0,27	0/0:2,0:2:6.02:0,6,84	1/1:0,1:1:3.01:36,3,0	1/1:0,4:4:12.04:144,12,0	1/1:0,2:2:6.02:72,6,0	0/1:7,7:14:99:213,0,212	0/1:2,4:6:66:126,0,66	0/1:10,2:12:35.76:36,0,383	0/1:4,3:7:86.86:87,0,147
chr10	21595315	.	T	TACAG	2512.82	PASS	AB=0.848;AC=13;AF=0.232;AN=56;BaseQRankSum=-3.930;DP=700;FS=2.728;HRun=0;HaplotypeScore=295.5953;InbreedingCoeff=0.8673;MQ=57.93;MQ0=2;MQRankSum=-5.107;QD=16.21;ReadPosRankSum=-5.671;VQSLOD=1.6149;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:46:69.21:0,69,1108	1/1:9,0:9:9.50:125,9,0	0/0:30,0:24:32.10:0,32,566	0/0:30,0:28:39.17:0,39,752	0/0:20,0:20:24.08:0,24,396	0/0:26,0:26:24.08:0,24,396	0/0:29,0:28:42.14:0,42,693	1/1:37,0:37:66.22:1278,66,0	0/0:25,0:25:45.15:0,45,738	0/0:38,0:38:75.21:0,75,1197	0/0:19,0:19:15.05:0,15,248	0/0:31,0:31:48.14:0,48,766	0/0:26,0:26:48.16:0,48,761	0/0:31,0:31:39.13:0,39,644	0/0:28,0:28:27.08:0,27,444	1/1:22,2:24:10.88:207,11,0	1/1:16,3:19:15.48:259,15,0	0/0:17,0:17:39.13:0,39,643	1/1:17,1:18:24.08:511,24,0	1/1:19,1:20:18.02:251,18,0	0/1:23,5:28:43.42:68,0,43	0/0:23,0:23:21.05:0,21,322	0/0:17,0:17:24.07:0,24,376	0/0:26,0:26:21.04:0,21,347	0/0:23,0:23:33.10:0,33,538	0/0:31,0:31:60.20:0,60,970	0/0:21,0:21:42.02:0,42,663	0/0:5,0:5:15.05:0,15,248
chr10	21595335	.	GAT	G	1022.78	PASS	AB=0.815;AC=10;AF=0.179;AN=56;BaseQRankSum=3.186;DP=677;FS=1.748;HRun=0;HaplotypeScore=253.5301;InbreedingCoeff=0.2302;MQ=44.88;MQ0=9;MQRankSum=-6.530;QD=6.35;ReadPosRankSum=-3.984;VQSLOD=2.6584;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:42:58.28:0,58,1225	1/1:2,7:9:9.19:84,9,0	0/0:43,0:18:48.48:0,48,817	0/0:43,0:22:59.01:0,59,1003	0/0:19,0:19:26.83:0,27,498	0/0:22,0:22:20.79:0,21,415	0/0:27,0:26:42.50:0,43,798	0/1:23,11:32:99:444,0,242	0/0:23,0:23:45.14:0,45,806	0/0:30,0:30:68.01:0,68,1273	0/0:17,0:17:15.05:0,15,290	0/0:28,0:27:48.13:0,48,829	0/0:29,0:29:17.34:0,17,768	0/0:28,0:28:39.13:0,39,718	0/0:19,0:20:27.09:0,27,470	1/1:10,10:20:7.85:73,8,0	0/1:18,2:20:99:147,0,105	0/0:15,0:15:16.02:0,16,668	0/1:12,5:15:99:216,0,184	0/1:10,13:23:54.24:182,0,54	0/1:23,7:30:16.61:17,0,168	0/0:18,0:18:21.53:0,22,373	0/0:17,0:17:23.74:0,24,434	0/0:28,0:28:21.54:0,22,405	0/0:20,0:20:13.65:0,14,501	0/0:28,0:28:34.03:0,34,997	0/0:18,0:18:39.55:0,40,643	0/1:8,0:7:5.43:5,0,236
chr10	21595343	.	TACACACACAC	T	5155.45	PASS	AB=0.707;AC=35;AF=0.625;AN=56;BaseQRankSum=-2.798;DP=655;FS=4.325;HRun=0;HaplotypeScore=292.2211;InbreedingCoeff=0.6281;MQ=42.58;MQ0=11;MQRankSum=-0.621;QD=12.30;ReadPosRankSum=3.670;VQSLOD=2.9022;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:24,13:36:2.73:38,3,0	0/0:8,0:9:9.03:0,9,184	0/0:37,0:13:2.94:0,3,18	0/0:44,0:20:3.01:0,3,65	1/1:13,6:20:11.43:131,11,0	1/1:10,10:20:6.91:179,7,0	1/1:19,4:23:15.03:306,15,0	0/0:35,0:34:42.14:0,42,981	1/1:16,5:21:11.97:96,12,0	1/1:21,7:28:30.06:770,30,0	1/1:9,6:16:3.01:51,3,0	1/1:13,12:24:8.94:132,9,0	1/1:16,15:31:41.70:855,42,0	1/1:19,8:28:14.96:180,15,0	1/1:7,0:18:9.49:31,9,0	0/0:16,0:20:7.86:0,8,264	0/0:13,0:19:25.87:0,26,348	1/1:15,3:17:17.12:385,17,0	0/0:19,0:17:6.84:0,7,79	0/0:18,0:21:18.06:0,18,337	0/0:27,0:31:19.04:0,19,391	0/1:9,8:18:0:0,0,0	1/1:10,6:17:9.49:101,9,0	0/1:20,9:29:12.53:85,0,13	0/1:10,8:18:43.08:120,0,43	1/1:16,10:26:39.09:1033,39,0	1/1:11,5:16:20.94:457,21,0	1/1:5,3:7:8.99:205,9,0
chr10	21595347	.	C	CAT	601.51	PASS	AB=0.958;AC=16;AF=0.286;AN=56;BaseQRankSum=1.857;DP=688;FS=9.067;HRun=0;HaplotypeScore=259.6696;InbreedingCoeff=-0.3960;MQ=41.93;MQ0=15;MQRankSum=-2.566;QD=1.64;ReadPosRankSum=-6.480;VQSLOD=-0.4340;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:42:12.37:0,12,270	0/1:6,4:10:22.94:41,0,23	0/0:34,0:11:17.92:0,18,151	0/0:45,0:17:48.05:0,48,478	0/0:21,0:21:5.12:0,5,169	0/1:20,0:19:10.83:11,0,117	0/1:26,0:25:20.86:21,0,198	0/0:35,0:33:4.32:0,4,393	0/0:22,0:22:35.63:0,36,279	0/0:29,0:29:41.57:0,42,533	0/0:14,0:14:7.84:0,8,63	0/0:23,0:22:29.84:0,30,229	0/1:32,0:31:48.54:49,0,265	0/1:30,0:30:70.13:70,0,214	0/0:19,0:19:20.18:0,20,141	0/1:18,4:22:7.97:67,0,8	0/1:24,2:25:65.04:102,0,65	0/1:19,0:18:48.79:49,0,229	0/0:14,0:12:6.96:0,7,78	0/0:20,2:22:19.78:0,20,112	0/1:32,0:32:83.06:83,0,94	0/1:21,1:22:12.95:13,0,89	0/1:22,0:22:12.60:13,0,151	0/1:30,0:30:41.80:42,0,138	0/1:20,0:20:41.09:41,0,120	0/1:30,0:30:99:137,0,377	0/1:17,0:17:4.99:5,0,182	0/1:7,0:7:12.96:13,0,69
chr10	21596599	.	GCA	G	14434.65	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-0.798;DP=909;FS=4.336;HRun=0;HaplotypeScore=153.3610;InbreedingCoeff=0.7550;MQ=58.68;MQ0=12;MQRankSum=2.723;QD=16.84;ReadPosRankSum=3.100;VQSLOD=4.6176;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:9,43:53:95.80:1086,96,0	1/1:0,9:9:24.07:282,24,0	0/0:25,0:8:8.99:0,9,100	0/0:27,0:12:3.01:0,3,36	1/1:6,29:34:19.16:436,19,0	1/1:2,7:9:12.03:141,12,0	1/1:14,15:30:36.12:348,36,0	1/1:19,0:36:15.28:159,15,0	1/1:6,37:45:77.90:875,78,0	1/1:11,33:45:99:1045,102,0	1/1:6,14:21:23.75:262,24,0	1/1:12,30:45:50.76:757,51,0	1/1:7,30:39:59.65:663,60,0	1/1:12,39:53:69.98:854,70,0	1/1:3,0:50:99:489,99,0	1/1:5,30:36:63.49:721,63,0	1/1:11,18:30:52.89:635,53,0	1/1:7,9:18:41.26:405,41,0	1/1:15,9:23:32.82:354,33,0	1/1:10,26:37:35.11:560,35,0	1/1:10,38:52:65.97:738,66,0	1/1:11,16:28:15.89:380,16,0	1/1:1,13:17:26.58:254,27,0	1/1:14,27:44:99:1092,102,0	1/1:4,19:22:42.02:494,42,0	1/1:7,20:29:68.54:699,69,0	1/1:7,25:32:57.17:670,57,0	1/1:5,6:11:3.01:36,3,0
chr10	21597018	.	CACACACATAA	C	25892.78	PASS	AB=0.696;AC=34;AF=0.607;AN=56;BaseQRankSum=20.045;DP=1290;FS=2.133;HRun=0;HaplotypeScore=414.0704;InbreedingCoeff=0.8456;MQ=50.98;MQ0=38;MQRankSum=-11.776;QD=34.48;ReadPosRankSum=-1.302;VQSLOD=2.9069;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:37,9:44:12.43:1200,12,0	0/0:22,0:21:48.16:0,48,2371	0/0:51,0:17:26.56:0,27,834	0/0:54,0:29:54.78:0,55,1203	1/1:4,39:42:15.97:416,16,0	1/1:9,26:35:51.18:1503,51,0	1/1:9,25:33:3.54:451,4,0	0/0:58,0:54:99:0,147,3475	1/1:5,35:40:48.16:1426,48,0	1/1:7,48:54:99:2746,125,0	1/1:3,24:27:30.10:796,30,0	1/1:11,54:66:86.53:2464,87,0	1/1:13,65:78:99:3448,114,0	1/1:7,53:60:78.46:2112,78,0	0/0:92,0:92:99:0,259,10230	0/0:80,0:79:99:0,226,9740	0/0:37,0:37:99:0,109,3525	0/1:23,6:29:62.72:916,0,63	0/0:35,0:27:66.19:0,66,2136	0/0:38,0:38:96.29:0,96,4020	0/0:72,0:72:99:0,194,7297	1/1:5,35:40:46.56:1394,47,0	1/1:4,25:29:32.76:940,33,0	1/1:34,9:43:29.68:1121,30,0	1/1:3,17:20:21.07:631,21,0	1/1:7,49:56:99:3185,135,0	1/1:8,20:27:23.97:706,24,0	0/1:5,17:22:2.94:439,0,3
chr10	21597095	.	T	TCA	1146.87	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.463;DP=1196;FS=12.789;HRun=0;HaplotypeScore=205.7827;InbreedingCoeff=0.9848;MQ=56.45;MQ0=15;MQRankSum=-0.617;QD=27.31;ReadPosRankSum=-5.037;VQSLOD=2.1823;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:44:89.28:0,89,1042	0/0:8,0:8:21.07:0,21,257	0/0:51,0:21:17.38:0,17,497	0/0:35,0:21:44.42:0,44,430	0/0:42,0:42:72.20:0,72,866	0/0:25,0:27:53.98:0,54,624	0/0:41,0:40:79.57:0,80,909	1/1:14,27:41:81.24:1242,81,0	0/0:46,0:47:87.97:0,88,1026	0/0:64,0:65:99:0,142,1886	0/0:24,0:24:42.12:0,42,500	0/0:67,0:67:99:0,126,1537	0/0:73,0:74:99:0,154,1870	0/0:53,0:54:99:0,102,1223	0/0:75,0:75:99:0,169,2053	0/0:67,2:69:99:0,126,2015	0/0:55,0:55:99:0,140,1632	0/0:33,0:33:64.53:0,65,809	0/0:23,0:20:45.11:0,45,532	0/0:25,0:25:56.74:0,57,649	0/0:75,0:76:99:0,160,2007	0/0:29,0:29:44.52:0,45,647	0/0:29,0:29:57.18:0,57,696	0/0:41,0:42:75.10:0,75,902	0/0:23,0:23:51.16:0,51,620	0/0:46,0:46:99:0,108,1265	0/0:29,0:30:56.99:0,57,661	0/0:17,0:16:24.07:0,24,288
chr10	21597152	.	C	CACACAT	854.14	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-1.923;DP=1183;FS=14.450;HRun=0;HaplotypeScore=277.7421;InbreedingCoeff=0.9997;MQ=53.69;MQ0=29;MQRankSum=-3.819;QD=30.50;ReadPosRankSum=-3.301;VQSLOD=1.7778;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:69.29:0,69,1416	0/0:16,0:16:45.15:0,45,987	0/0:50,0:20:57.14:0,57,1062	0/0:39,0:22:52.84:0,53,1132	0/0:40,0:40:93.26:0,93,1849	0/0:42,0:42:99:0,111,2364	0/0:28,0:28:66.21:0,66,1402	1/1:20,8:17:44.99:949,45,0	0/0:46,0:46:99:0,108,2338	0/0:69,0:66:99:0,163,3321	0/0:24,0:24:63.20:0,63,1340	0/0:65,0:65:99:0,148,3160	0/0:70,0:70:99:0,178,3585	0/0:47,0:47:99:0,123,2655	0/0:81,0:81:99:0,202,4173	0/0:68,0:68:99:0,175,3708	0/0:55,0:55:99:0,120,2523	0/0:32,0:32:75.04:0,75,1576	0/0:21,0:18:44.34:0,44,842	0/0:33,0:33:90.30:0,90,1933	0/0:72,0:71:99:0,160,3299	0/0:32,0:32:90.31:0,90,1912	0/0:29,0:29:75.22:0,75,1518	0/0:41,0:41:72.09:0,72,1534	0/0:28,0:28:63.22:0,63,1380	0/0:48,0:48:99:0,123,2659	0/0:32,0:32:75.23:0,75,1562	0/0:13,0:13:33.11:0,33,669
chr10	21597231	.	T	TAC	9677.23	PASS	AB=0.715;AC=33;AF=0.589;AN=56;BaseQRankSum=-9.200;DP=887;FS=11.955;HRun=0;HaplotypeScore=129.6820;InbreedingCoeff=0.2600;MQ=56.59;MQ0=13;MQRankSum=0.639;QD=14.42;ReadPosRankSum=1.966;VQSLOD=3.8888;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:20,9:29:9.62:418,10,0	0/0:10,0:10:23.71:0,24,241	0/0:37,0:19:9.02:0,9,96	0/1:41,0:19:0.04:0,0,166	1/1:16,20:36:27.09:421,27,0	0/1:17,15:33:54.85:561,0,55	0/1:14,13:29:36.31:388,0,36	1/1:26,0:22:13.77:80,14,0	1/1:16,15:33:25:548,25,0	1/1:14,18:31:11.97:548,12,0	1/1:6,10:16:15.03:210,15,0	0/1:29,14:43:0.46:850,0,0	0/1:22,13:35:6.44:795,0,6	0/1:14,18:33:28.63:624,0,29	1/1:17,30:48:21.09:762,21,0	0/0:48,0:48:91.79:0,92,1024	0/0:41,0:43:61.13:0,61,847	1/1:18,5:23:29.68:400,30,0	0/1:24,3:26:13.79:14,0,292	0/0:22,0:22:48.13:0,48,544	0/0:52,1:56:60.91:0,61,1089	1/1:16,21:37:7.76:569,8,0	0/1:13,16:30:33.52:432,0,34	1/1:12,17:30:33.11:515,33,0	0/1:7,17:24:7.74:348,0,8	0/1:15,20:35:3.52:758,0,4	0/1:12,12:24:60.85:339,0,61	1/1:4,2:6:7.27:97,7,0
chr10	21598668	.	GA	G	1193.24	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.293;DP=763;FS=11.338;HRun=8;HaplotypeScore=72.1305;InbreedingCoeff=0.9925;MQ=71.43;MQ0=0;MQRankSum=-0.106;QD=22.95;ReadPosRankSum=-4.989;VQSLOD=1.3442;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,102,1219	0/0:13,0:13:33.10:0,33,399	0/0:21,0:21:62.71:0,63,694	0/0:16,0:16:45.07:0,45,508	0/0:29,0:29:81.22:0,81,949	0/0:24,0:24:66.20:0,66,797	0/0:19,0:19:48.15:0,48,580	1/1:6,46:52:99:1288,105,0	0/0:35,0:35:84.24:0,84,1001	0/0:36,0:38:92.33:0,92,1203	0/0:15,1:16:19.17:0,19,515	0/0:36,0:36:99:0,105,1256	0/0:31,0:31:81.25:0,81,978	0/0:33,0:33:90.26:0,90,1076	0/0:26,0:26:69.03:0,69,801	0/0:44,0:44:99:0,123,1484	0/0:27,0:27:75.23:0,75,906	0/0:38,0:38:99:0,99,1179	0/0:17,0:17:48.15:0,48,577	0/0:27,0:27:64.04:0,64,721	0/0:10,0:10:27.07:0,27,315	0/0:25,0:25:66.19:0,66,787	0/0:19,0:19:54.17:0,54,652	0/0:31,0:31:87.22:0,87,1024	0/0:26,0:26:75.22:0,75,895	0/0:24,0:24:69.20:0,69,824	0/0:32,0:32:90.26:0,90,1074	0/0:16,0:16:45.14:0,45,544
chr10	21600029	.	A	AC	773.10	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-7.362;DP=629;FS=2.625;HRun=7;HaplotypeScore=61.9850;InbreedingCoeff=0.9888;MQ=90.14;MQ0=0;MQRankSum=0.279;QD=23.43;ReadPosRankSum=-3.792;VQSLOD=2.2432;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:84.13:0,84,811	0/0:9,0:9:24.04:0,24,232	0/0:27,0:27:63.05:0,63,597	0/0:24,0:24:66.04:0,66,612	0/0:34,0:34:96.11:0,96,913	0/0:27,0:27:66.08:0,66,632	0/0:16,0:16:36.05:0,36,348	1/1:7,26:33:75.18:868,75,0	0/0:16,0:16:42.06:0,42,405	0/0:20,0:20:54.07:0,54,517	0/0:20,0:20:54.09:0,54,521	0/0:17,0:17:48.08:0,48,463	0/0:29,0:29:81:0,81,762	0/0:20,0:20:54.07:0,54,516	0/0:24,0:24:69.07:0,69,657	0/0:29,0:29:84.13:0,84,811	0/0:23,0:23:66.10:0,66,637	0/0:11,0:11:27.04:0,27,261	0/0:17,0:17:42.06:0,42,405	0/0:19,0:19:54.05:0,54,506	0/0:25,0:25:63.08:0,63,603	0/0:21,0:21:48.02:0,48,463	0/0:24,0:24:60.09:0,60,579	0/0:31,0:31:81.08:0,81,773	0/0:26,0:26:72.11:0,72,695	0/0:24,0:24:66.08:0,66,628	0/0:25,0:25:75.08:0,75,715	0/0:6,0:6:18.03:0,18,174
chr10	21600149	.	TTG	T	1773.64	PASS	AB=0.821;AC=13;AF=0.250;AN=52;BaseQRankSum=-1.069;DP=608;FS=5.048;HRun=0;HaplotypeScore=105.3457;InbreedingCoeff=0.6724;MQ=64.09;MQ0=13;MQRankSum=0.955;QD=10.49;ReadPosRankSum=4.602;VQSLOD=3.1095;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:15:0,15,149	1/1:5,6:11:11.90:130,12,0	./.	./.	0/0:17,0:24:17.96:0,18,147	0/0:17,0:17:11.95:0,12,102	0/0:11,0:14:2.68:0,3,11	0/0:29,0:29:13.11:0,13,96	0/0:19,0:19:9:0,9,78	0/0:15,0:15:23.87:0,24,225	0/0:7,0:11:4.91:0,5,51	0/0:13,0:13:2.99:0,3,23	0/0:14,0:19:5.05:0,5,44	0/0:18,0:21:3:0,3,26	0/1:17,5:23:8.71:89,0,9	1/1:14,17:31:51.10:542,51,0	1/1:13,15:29:32.92:340,33,0	0/0:17,0:16:5.96:0,6,45	1/1:16,5:21:15.04:163,15,0	1/1:14,11:24:35.85:344,36,0	1/1:19,10:28:34:339,34,0	0/0:16,0:26:19.06:0,19,142	0/0:15,0:15:8.98:0,9,73	0/0:21,0:20:6:0,6,63	0/0:16,0:21:5.98:0,6,52	0/0:29,0:39:49.07:0,49,389	0/0:10,0:18:8.99:0,9,76	0/0:14,0:16:14.95:0,15,134
chr10	21600631	.	G	GTTATT	355.44	PASS	AB=0.682;AC=7;AF=0.130;AN=54;BaseQRankSum=7.545;DP=217;FS=4.959;HRun=0;HaplotypeScore=44.8950;InbreedingCoeff=-0.1837;MQ=68.29;MQ0=1;MQRankSum=-0.807;QD=5.55;ReadPosRankSum=0.749;VQSLOD=1.0612;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:4,0:6:25.74:26,0,126	0/0:1,0:1:3.01:0,3,45	0/0:3,0:3:9.03:0,9,135	0/0:4,0:2:6.02:0,6,82	0/0:10,0:10:30.06:0,30,390	0/0:10,0:10:27.09:0,27,531	0/0:2,0:2:6.02:0,6,140	0/0:37,0:38:30.75:0,31,1380	./.	0/0:10,0:10:30.10:0,30,503	0/0:12,0:12:36.12:0,36,618	0/0:3,0:3:9.03:0,9,136	0/0:6,0:6:18.06:0,18,300	0/0:2,0:2:6.02:0,6,91	0/0:5,0:6:8.35:0,8,197	0/1:1,0:5:23.70:24,0,32	0/1:2,0:8:31.27:31,0,121	0/0:13,0:14:42.14:0,42,813	0/1:13,0:15:3.47:3,0,442	0/1:3,0:5:4.47:4,0,116	0/0:4,0:5:5.37:0,5,171	0/0:2,0:2:6.01:0,6,70	0/0:9,0:9:27.09:0,27,454	0/0:2,0:2:6.02:0,6,115	0/0:8,0:8:24.08:0,24,412	0/1:2,1:6:78.64:133,0,79	0/0:5,0:5:15.05:0,15,223	0/1:11,0:19:99:253,0,403
chr10	21601304	.	G	GA	2346.07	PASS	AB=0.695;AC=12;AF=0.214;AN=56;BaseQRankSum=-9.787;DP=641;FS=6.680;HRun=11;HaplotypeScore=68.9499;InbreedingCoeff=0.5615;MQ=71.14;MQ0=0;MQRankSum=-0.318;QD=14.39;ReadPosRankSum=1.087;VQSLOD=3.9474;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,99,764	1/1:2,6:8:18.04:183,18,0	0/0:14,0:13:8.91:0,9,69	0/0:14,0:14:26.59:0,27,189	0/0:25,2:27:29.26:0,29,408	0/0:33,0:33:89.54:0,90,687	0/0:16,0:16:38.83:0,39,302	0/0:35,0:37:90.68:0,91,678	0/0:14,0:14:38.85:0,39,302	0/0:33,0:33:64.75:0,65,493	0/0:21,0:22:52.80:0,53,400	0/0:16,0:16:38.81:0,39,298	0/0:15,0:15:26.55:0,27,195	0/0:26,0:27:63.90:0,64,489	1/1:3,15:22:43.75:432,44,0	1/1:3,19:23:0.78:405,1,0	0/1:8,21:29:20.80:537,0,21	0/0:14,0:14:35.86:0,36,279	1/1:6,13:20:18.47:324,18,0	0/1:13,13:26:4.70:393,0,5	0/1:7,14:21:74.08:232,0,74	0/0:21,0:21:53.77:0,54,414	0/0:28,2:31:9.73:0,10,422	0/0:20,0:22:48.84:0,49,360	0/0:24,0:24:53.76:0,54,418	0/0:20,0:21:37.83:0,38,284	0/0:31,1:33:49.25:0,49,556	0/1:12,1:14:1.55:2,0,163
chr10	21601762	.	T	TCC	304.10	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-2.512;DP=614;FS=1.031;HRun=8;HaplotypeScore=80.4903;InbreedingCoeff=0.9688;MQ=85.15;MQ0=0;MQRankSum=-1.558;QD=13.22;ReadPosRankSum=-3.879;VQSLOD=0.4347;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:90.17:0,90,979	0/0:14,0:14:39.10:0,39,434	0/0:18,0:18:32.75:0,33,344	0/0:22,0:21:36.03:0,36,382	0/0:35,0:35:99:0,105,1169	0/0:15,0:15:42.11:0,42,468	0/0:21,0:22:45.04:0,45,560	1/1:16,6:23:37.99:399,38,0	0/0:20,0:20:57.14:0,57,635	0/0:29,0:29:66.15:0,66,734	0/0:14,0:14:39.10:0,39,435	0/0:23,0:23:60.14:0,60,660	0/0:20,0:20:54.13:0,54,601	0/0:22,0:22:66.15:0,66,714	0/0:30,0:30:84.22:0,84,936	0/0:25,0:25:66.18:0,66,735	0/0:28,0:28:75.18:0,75,826	0/0:22,0:22:54.10:0,54,586	0/0:19,0:19:39.09:0,39,434	0/0:20,0:20:54.14:0,54,602	0/0:20,0:20:51.11:0,51,549	0/0:25,0:25:66.15:0,66,726	0/0:11,0:12:29.81:0,30,313	0/0:22,0:22:54.12:0,54,591	0/0:21,0:21:54.13:0,54,601	0/0:20,0:20:51.13:0,51,568	0/0:26,0:26:66.08:0,66,735	0/0:7,0:7:12:0,12,122
chr10	21601803	.	AT	A	3749.17	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=9.487;DP=646;FS=2.717;HRun=6;HaplotypeScore=64.6491;InbreedingCoeff=0.9957;MQ=81.40;MQ0=0;MQRankSum=-3.049;QD=26.04;ReadPosRankSum=2.315;VQSLOD=4.1257;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:93.28:0,93,1193	1/1:1,6:7:15.04:161,15,0	0/0:28,0:28:66.21:0,66,848	0/0:21,0:21:29.06:0,29,498	0/0:21,0:21:57.16:0,57,720	0/0:26,0:26:75.24:0,75,987	0/0:22,0:22:63.18:0,63,799	0/0:2,0:28:75.31:0,75,452	0/0:22,0:22:66.20:0,66,851	0/0:29,0:29:81.25:0,81,1040	0/0:13,0:13:39.12:0,39,499	0/0:19,0:19:54.12:0,54,652	0/0:27,0:27:72.23:0,72,946	0/0:22,0:22:60.19:0,60,780	0/0:35,0:35:99:0,105,1366	1/1:2,26:28:66.16:709,66,0	1/1:3,28:31:81.20:871,81,0	0/0:17,0:17:45.15:0,45,592	1/1:2,21:23:63.14:669,63,0	1/1:3,28:31:75.12:791,75,0	1/1:2,22:24:51.13:548,51,0	0/0:29,0:29:81.25:0,81,1050	0/0:9,0:9:21.06:0,21,262	0/0:23,0:23:66.18:0,66,837	0/0:21,0:21:57.17:0,57,725	0/0:23,0:22:63.20:0,63,829	0/0:22,0:21:63.18:0,63,799	0/0:12,0:12:33.11:0,33,434
chr10	21603721	.	GTT	G	3782.77	PASS	AB=0.718;AC=36;AF=0.643;AN=56;BaseQRankSum=-1.818;DP=535;FS=14.628;HRun=16;HaplotypeScore=70.6298;InbreedingCoeff=-0.0942;MQ=67.59;MQ0=1;MQRankSum=3.147;QD=8.07;ReadPosRankSum=8.918;VQSLOD=-0.7105;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:10,9:19:36.84:166,0,37	1/1:1,6:8:17.64:137,18,0	0/1:16,0:11:6.90:7,0,98	0/0:11,0:6:0.99:0,1,13	0/1:9,1:20:16.86:17,0,106	1/1:5,12:20:15.17:238,15,0	0/1:12,6:18:13.24:71,0,13	0/0:23,1:30:14.77:0,15,246	0/1:8,5:15:4.82:142,0,5	1/1:11,13:25:35.26:326,35,0	1/1:8,12:26:28.78:294,29,0	0/1:17,3:20:48.80:57,0,49	0/1:14,8:22:8.26:125,0,8	1/1:11,8:20:9.12:103,9,0	0/0:22,0:24:56.05:0,56,490	0/1:11,11:22:3.55:228,0,4	1/1:8,7:16:5.69:92,6,0	0/1:6,2:8:8.64:63,0,9	0/1:14,5:23:17.46:126,0,17	1/1:11,19:32:48.15:388,48,0	0/1:4,4:9:27.37:105,0,27	0/1:8,2:19:20.23:20,0,113	1/1:7,6:16:19.14:157,19,0	1/1:3,7:10:18.30:151,18,0	1/1:3,13:16:23.88:200,24,0	0/1:11,11:24:11.38:240,0,11	1/1:14,13:30:4.02:193,4,0	0/1:3,8:13:6.21:136,0,6
chr10	21604313	.	CT	C	15811.36	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-5.297;DP=615;FS=0.000;HRun=7;HaplotypeScore=61.6453;InbreedingCoeff=0.9385;MQ=73.12;MQ0=1;MQRankSum=-6.390;QD=26.62;ReadPosRankSum=4.036;VQSLOD=5.3675;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,12:13:36.08:367,36,0	1/1:0,8:8:24.05:245,24,0	0/0:13,0:13:27.02:0,27,300	0/0:8,0:8:15.04:0,15,173	1/1:3,32:35:99:993,99,0	1/1:1,15:16:45.10:459,45,0	1/1:0,17:17:51.11:520,51,0	1/1:3,26:29:78.16:789,78,0	1/1:0,15:15:39.09:398,39,0	1/1:2,31:33:93.21:949,93,0	1/1:1,22:23:66.15:673,66,0	1/1:3,19:22:48.11:490,48,0	1/1:1,32:33:93.21:949,93,0	1/1:1,19:20:54.12:551,54,0	1/1:2,31:33:81.18:826,81,0	1/1:0,30:30:78.18:796,78,0	1/1:10,23:32:66:673,66,0	1/1:2,2:4:6.01:61,6,0	1/1:5,12:17:36.07:367,36,0	1/1:2,23:25:63.14:643,63,0	1/1:0,15:15:42.10:429,42,0	1/1:2,19:21:57.13:582,57,0	1/1:2,24:26:63.14:642,63,0	1/1:1,17:18:42.09:428,42,0	1/1:5,14:19:44.93:442,45,0	1/1:2,38:40:99:1163,114,0	1/1:0,32:32:84.09:856,84,0	1/1:0,17:17:51.12:520,51,0
chr10	21604825	.	C	CT	2428.43	PASS	AB=0.848;AC=15;AF=0.268;AN=56;BaseQRankSum=-7.641;DP=614;FS=0.000;HRun=12;HaplotypeScore=69.5457;InbreedingCoeff=0.7386;MQ=65.28;MQ0=1;MQRankSum=1.593;QD=10.94;ReadPosRankSum=-2.157;VQSLOD=2.6579;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:37.53:0,38,260	1/1:3,8:11:21.02:199,21,0	0/1:18,0:9:2.88:3,0,26	0/0:12,0:11:10.94:0,11,47	0/1:30,1:31:20.84:21,0,293	0/0:15,0:15:29.56:0,30,208	0/0:10,0:10:20.56:0,21,152	1/1:22,20:42:88.31:787,88,0	0/0:19,0:20:16.71:0,17,115	0/0:28,0:28:38.66:0,39,283	0/0:24,0:24:47.62:0,48,349	0/0:22,0:22:38.44:0,38,276	0/0:24,0:24:24.63:0,25,185	0/0:21,0:22:10.79:0,11,165	0/0:18,0:18:4.90:0,5,166	1/1:7,19:26:15.43:293,15,0	0/1:5,14:19:0.40:155,0,0	0/0:17,1:18:12.55:0,13,253	1/1:15,17:32:14.08:408,14,0	1/1:7,15:23:7.02:361,7,0	1/1:2,14:18:25.84:386,26,0	0/0:21,0:22:52.69:0,53,378	0/0:26,2:29:38.07:0,38,435	0/0:12,0:12:17.78:0,18,131	0/0:21,0:22:31.74:0,32,224	0/0:26,0:29:44.98:0,45,303	0/0:25,0:26:27.71:0,28,323	0/0:17,0:18:43.77:0,44,312
chr10	21604898	.	A	ATG	2226.84	PASS	AB=0.812;AC=21;AF=0.389;AN=54;BaseQRankSum=-5.423;DP=649;FS=1.106;HRun=0;HaplotypeScore=117.7409;InbreedingCoeff=-0.2146;MQ=57.56;MQ0=13;MQRankSum=1.357;QD=5.38;ReadPosRankSum=-2.138;VQSLOD=2.9643;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:14,22:36:30.07:430,30,0	0/0:0,0:5:11.36:0,11,56	1/1:26,0:16:0.47:1,0,0	./.	0/1:8,12:20:9.29:293,0,9	0/1:10,11:22:70.97:184,0,71	0/1:7,1:12:21.37:92,0,21	1/1:31,0:35:2.77:19,3,0	0/1:6,13:20:35.71:457,0,36	0/1:22,1:22:19.45:156,0,19	0/1:8,7:16:21.36:124,0,21	0/0:25,0:27:35.91:0,36,371	0/0:15,0:16:35.91:0,36,368	0/0:19,0:18:21.04:0,21,224	0/0:15,0:18:29.75:0,30,307	0/0:7,0:20:32.45:0,32,157	0/1:13,0:20:14.03:14,0,83	0/1:21,11:30:93.04:184,0,93	0/0:16,0:21:4.23:0,4,91	0/1:13,0:20:37.76:38,0,71	0/0:43,0:51:38.18:0,38,181	0/1:10,11:21:27.70:39,0,28	0/1:21,0:19:12.87:13,0,265	0/0:29,0:29:62.53:0,63,635	0/1:8,13:21:9.31:294,0,9	0/1:29,0:29:21.53:22,0,197	0/1:19,1:21:24.50:25,0,159	0/1:12,0:12:0.19:0,0,154
chr10	21607754	.	GCACA	G	113.43	PASS	AB=0.978;AC=12;AF=0.273;AN=44;BaseQRankSum=0.566;DP=449;FS=1.748;HRun=0;HaplotypeScore=87.7588;InbreedingCoeff=0.1896;MQ=64.04;MQ0=17;MQRankSum=1.450;QD=0.92;ReadPosRankSum=0.628;VQSLOD=1.4610;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:0:0,0,0	1/1:6,0:6:2.22:7,2,0	./.	./.	0/0:9,0:8:6:0,6,70	0/0:9,0:14:8.74:0,9,99	0/0:30,0:30:9.01:0,9,140	./.	0/0:16,0:16:7.83:0,8,68	0/0:8,0:13:17.17:0,17,234	0/0:10,0:9:3.01:0,3,51	0/0:13,0:12:7.79:0,8,55	0/0:15,0:14:8.05:0,8,34	0/1:16,0:16:21.05:21,0,78	0/0:9,0:9:2.29:0,2,6	1/1:11,0:11:3.43:44,3,0	0/1:19,1:19:7.09:51,0,7	0/0:16,0:17:3:0,3,47	0/0:13,0:13:2.84:0,3,14	0/1:10,0:8:18.53:34,0,19	0/0:27,0:24:8.83:0,9,63	0/0:20,0:20:10.82:0,11,86	./.	1/1:9,22:31:3.01:46,3,0	./.	0/1:20,0:20:16.72:17,0,26	1/1:8,0:8:2.92:17,3,0	./.
chr10	21608506	.	T	TG	23352.69	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-10.311;DP=680;FS=9.279;HRun=2;HaplotypeScore=57.7179;InbreedingCoeff=0.9963;MQ=87.03;MQ0=0;MQRankSum=-5.764;QD=38.73;ReadPosRankSum=4.935;VQSLOD=4.8331;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,42:44:99:1725,120,0	1/1:1,9:10:27.09:389,27,0	0/0:18,0:18:51.12:0,51,595	0/0:28,0:28:17.76:0,18,536	1/1:1,24:25:69.23:985,69,0	1/1:0,15:15:39.13:561,39,0	1/1:1,26:27:66.22:950,66,0	1/1:4,37:41:99:1516,108,0	1/1:1,23:24:66.22:950,66,0	1/1:2,15:17:48.15:667,48,0	1/1:1,17:18:51.17:720,51,0	1/1:1,34:35:93.31:1339,93,0	1/1:3,23:26:66.22:950,66,0	1/1:0,37:37:99:1512,105,0	0/0:31,0:31:93.26:0,93,1127	1/1:2,23:25:66.22:950,66,0	1/1:1,37:38:99:1469,102,0	1/1:2,15:17:39.13:559,39,0	1/1:1,18:19:57.19:821,57,0	1/1:0,29:29:81.26:1159,81,0	1/1:0,21:21:57.19:820,57,0	1/1:0,17:17:48.16:691,48,0	1/1:1,16:17:45.15:647,45,0	1/1:0,24:24:69.23:994,69,0	1/1:0,16:17:42.14:605,42,0	1/1:1,21:22:66.16:906,66,0	1/1:2,26:28:72.24:1037,72,0	1/1:0,10:10:30.10:432,30,0
chr10	21608862	.	CTG	C	7129.80	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=14.936;DP=714;FS=5.767;HRun=0;HaplotypeScore=82.0221;InbreedingCoeff=0.9944;MQ=79.03;MQ0=1;MQRankSum=-1.250;QD=43.74;ReadPosRankSum=1.144;VQSLOD=6.4034;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:90.31:0,90,1798	1/1:0,16:16:45.15:734,45,0	0/0:22,0:22:66.23:0,66,1303	0/0:17,0:17:48.16:0,48,934	0/0:32,0:32:96.33:0,96,1951	0/0:31,0:31:90.31:0,90,1819	0/0:27,0:27:81.28:0,81,1646	1/1:0,19:19:57.19:902,57,0	0/0:15,0:15:45.15:0,45,914	0/0:33,0:33:99:0,99,2000	0/0:21,0:21:63.20:0,63,1243	0/0:32,0:32:96.33:0,96,1932	0/0:29,0:29:87.30:0,87,1768	0/0:26,0:26:78.27:0,78,1584	0/0:47,0:47:99:0,141,2820	1/1:0,34:34:84.29:1370,84,0	1/1:1,14:14:39.13:636,39,0	0/0:22,0:22:60.21:0,60,1219	1/1:0,22:22:60.20:945,60,0	1/1:0,27:27:72.25:1174,72,0	1/1:0,30:30:84.29:1370,84,0	0/0:23,0:23:69.24:0,69,1388	0/0:21,0:21:63.20:0,63,1208	0/0:29,0:29:84.29:0,84,1697	0/0:24,0:24:72.25:0,72,1425	0/0:25,0:25:75.24:0,75,1426	0/0:41,0:41:99:0,123,2499	0/0:4,0:4:12.04:0,12,244
chr10	21609695	.	AG	A	12066.82	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=13.092;DP=646;FS=3.175;HRun=5;HaplotypeScore=112.0094;InbreedingCoeff=0.9990;MQ=87.69;MQ0=0;MQRankSum=-3.569;QD=28.66;ReadPosRankSum=6.054;VQSLOD=3.9814;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,25:29:60.17:680,60,0	0/0:9,0:9:27.09:0,27,365	0/0:26,0:26:72.20:0,72,946	0/0:34,1:35:84.22:0,84,1077	1/1:5,32:37:83.28:937,83,0	1/1:2,28:30:78.22:885,78,0	1/1:0,19:19:51.15:579,51,0	0/0:32,0:31:78.22:0,78,1033	1/1:1,25:26:66.19:748,66,0	1/1:1,20:21:60.16:669,60,0	1/1:2,22:24:60.17:678,60,0	1/1:1,25:26:63.18:715,63,0	1/1:0,28:28:78.22:885,78,0	1/1:0,29:29:81.23:919,81,0	0/0:28,0:28:75.25:0,75,1024	0/0:25,0:25:72.22:0,72,967	0/0:16,0:16:48.16:0,48,657	1/1:2,18:20:48.13:543,48,0	0/0:16,0:16:45.15:0,45,615	0/0:28,0:28:78.26:0,78,1062	0/0:10,0:10:27.06:0,27,335	1/1:1,14:15:36.10:408,36,0	1/1:1,16:17:38.88:442,39,0	1/1:2,11:13:24.07:272,24,0	1/1:2,10:12:30.08:339,30,0	1/1:2,29:31:90.24:1009,90,0	1/1:0,35:35:96.21:1088,96,0	1/1:0,9:9:24.07:272,24,0
chr10	21611427	.	GA	G	11248.09	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-0.189;DP=544;FS=13.963;HRun=8;HaplotypeScore=67.9333;InbreedingCoeff=0.9583;MQ=74.55;MQ0=0;MQRankSum=-0.475;QD=23.38;ReadPosRankSum=3.770;VQSLOD=4.3641;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:22,5:27:68.84:617,69,0	1/1:0,8:8:21.03:202,21,0	0/0:19,0:13:23.84:0,24,234	0/0:22,0:20:20.28:0,20,295	1/1:17,7:24:60.07:568,60,0	1/1:2,24:26:66.10:637,66,0	1/1:5,17:22:48.07:463,48,0	1/1:5,27:32:84.03:776,84,0	1/1:1,11:12:27.04:261,27,0	1/1:0,22:22:63.10:608,63,0	1/1:4,15:19:41.48:376,41,0	1/1:2,17:19:42.04:398,42,0	1/1:3,13:16:30.01:289,30,0	1/1:3,17:20:48.07:463,48,0	0/0:21,0:21:51.14:0,51,596	1/1:0,23:23:54.08:521,54,0	1/1:3,19:22:48.07:462,48,0	1/1:0,18:18:54.09:521,54,0	1/1:3,12:15:23.80:332,24,0	1/1:4,22:26:63.09:607,63,0	1/1:1,11:12:33.05:319,33,0	1/1:7,7:14:39.06:376,39,0	1/1:4,17:21:45.07:434,45,0	1/1:1,13:14:33.05:319,33,0	1/1:7,19:26:69.09:660,69,0	1/1:12,7:19:54.06:514,54,0	1/1:14,8:22:43.46:467,43,0	1/1:1,1:2:6.01:58,6,0
chr10	21611439	.	C	CA	2455.23	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=-4.716;DP=548;FS=0.904;HRun=10;HaplotypeScore=103.9484;InbreedingCoeff=0.8305;MQ=71.13;MQ0=1;MQRankSum=-3.935;QD=17.41;ReadPosRankSum=-0.865;VQSLOD=3.3048;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:22,6:28:72.15:752,72,0	0/0:9,0:9:20.97:0,21,172	0/0:16,0:10:10.23:0,10,85	0/1:24,0:21:12.71:13,0,137	1/1:17,9:26:57.13:598,57,0	0/0:26,0:26:65.92:0,66,542	0/0:18,0:19:43.95:0,44,351	0/0:37,1:38:60.89:0,61,705	0/0:11,0:11:26.93:0,27,217	0/0:24,0:23:56.93:0,57,468	0/0:19,0:19:42.41:0,42,346	0/0:20,0:20:44.93:0,45,369	0/0:13,0:13:20.92:0,21,169	0/0:15,0:16:31.97:0,32,252	0/0:18,0:19:46.96:0,47,372	0/0:21,0:21:47.94:0,48,394	0/0:23,0:23:44.89:0,45,369	0/0:21,0:21:50.92:0,51,419	0/0:18,0:18:41.45:0,41,329	0/0:24,0:24:53.91:0,54,443	0/0:12,0:12:32.96:0,33,271	1/1:15,1:16:8.41:280,8,0	0/0:18,0:19:31.94:0,32,248	0/0:15,0:15:32.95:0,33,271	0/0:23,0:23:21.91:0,22,387	1/1:17,4:21:1.83:422,2,0	1/1:14,5:20:44.51:451,45,0	1/1:2,4:6:12:117,12,0
chr10	21611984	.	G	GA	6222.54	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-3.130;DP=844;FS=0.641;HRun=7;HaplotypeScore=86.4053;InbreedingCoeff=0.9978;MQ=85.33;MQ0=0;MQRankSum=-5.545;QD=30.96;ReadPosRankSum=-0.475;VQSLOD=4.4121;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:64,0:64:99:0,180,1732	1/1:0,7:7:21.06:254,21,0	0/0:34,0:35:72.55:0,73,659	0/0:29,0:29:76.03:0,76,687	0/0:31,0:31:75.11:0,75,724	0/0:28,0:28:75.10:0,75,717	0/0:40,0:40:99:0,108,1031	1/1:2,26:28:78.07:886,78,0	0/0:29,0:29:84.14:0,84,811	0/0:31,0:31:81.12:0,81,778	0/0:30,0:30:75.11:0,75,724	0/0:32,0:32:81.10:0,81,770	0/0:32,0:32:90.11:0,90,857	0/0:46,0:46:99:0,123,1182	0/0:29,0:29:69.09:0,69,666	1/1:4,34:38:93.29:1124,93,0	1/1:2,38:40:99:1232,102,0	0/0:24,0:24:66.10:0,66,637	1/1:3,19:22:57.17:677,57,0	1/1:1,41:42:99:1397,117,0	1/1:5,19:24:54.17:652,54,0	0/0:30,0:30:72.09:0,72,695	0/0:18,0:18:51.07:0,51,486	0/0:33,0:33:67.23:0,67,785	0/0:25,0:25:69:0,69,641	0/0:24,0:24:63.09:0,63,604	0/0:27,0:27:78.10:0,78,744	0/0:6,0:6:18.03:0,18,174
chr10	21612089	.	T	TAG	2425.40	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-9.455;DP=798;FS=3.403;HRun=0;HaplotypeScore=90.0604;InbreedingCoeff=0.9889;MQ=78.07;MQ0=0;MQRankSum=-1.597;QD=47.56;ReadPosRankSum=0.536;VQSLOD=4.8399;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:68,0:68:99:0,187,2582	0/0:18,0:18:42.14:0,42,588	0/0:23,0:23:54.07:0,54,715	0/0:18,0:18:53.93:0,54,687	0/0:24,0:24:54.17:0,54,739	0/0:22,0:22:60.15:0,60,840	0/0:31,0:31:87.20:0,87,1174	0/0:26,0:26:66.22:0,66,924	0/0:37,0:37:99:0,105,1469	0/0:27,0:27:75.24:0,75,1035	0/0:18,0:18:54.18:0,54,756	0/0:31,0:31:93.31:0,93,1302	0/0:31,0:31:84.28:0,84,1176	0/0:44,0:44:99:0,114,1579	0/0:26,0:26:69.23:0,69,966	0/0:29,0:28:84.27:0,84,1157	0/0:25,0:25:72.20:0,72,986	0/0:35,0:34:99:0,105,1448	0/0:21,0:21:57.18:0,57,779	0/0:27,0:27:81.25:0,81,1116	0/0:49,0:49:99:0,138,1895	0/0:20,0:20:54.17:0,54,740	0/0:34,0:34:93.31:0,93,1302	0/0:39,0:39:99:0,117,1602	0/0:24,0:24:69.22:0,69,950	1/1:0,21:21:63.21:1107,63,0	1/1:2,23:24:69.24:1242,69,0	1/1:0,5:5:12.04:216,12,0
chr10	21613208	.	GA	G	10226.78	PASS	AB=1.000;AC=37;AF=0.661;AN=56;BaseQRankSum=-3.453;DP=629;FS=6.920;HRun=8;HaplotypeScore=75.0272;InbreedingCoeff=0.9241;MQ=73.18;MQ0=1;MQRankSum=-0.286;QD=24.35;ReadPosRankSum=4.428;VQSLOD=5.5252;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,22:23:57.09:550,57,0	0/0:6,0:6:15.05:0,15,181	0/0:11,0:10:14.67:0,15,148	0/1:18,0:15:9.01:9,0,99	1/1:2,28:30:75.11:724,75,0	1/1:0,26:26:75.12:724,75,0	1/1:0,15:15:42.07:406,42,0	0/0:46,0:46:99:0,126,1487	1/1:0,18:18:51.08:492,51,0	1/1:2,25:27:75.12:724,75,0	1/1:1,11:12:27.04:261,27,0	1/1:3,26:29:69.11:666,69,0	1/1:0,21:21:60.10:579,60,0	1/1:3,22:25:60.09:579,60,0	0/0:34,0:34:99:0,99,1196	0/0:22,0:22:57.15:0,57,675	0/0:27,0:27:72.21:0,72,858	1/1:1,18:19:51.08:492,51,0	0/0:19,0:19:48.14:0,48,570	0/0:24,0:24:60.18:0,60,724	0/0:19,0:19:54.15:0,54,640	1/1:1,26:27:75.11:724,75,0	1/1:2,22:24:66.11:637,66,0	1/1:1,15:16:42.06:406,42,0	1/1:1,20:21:57.09:550,57,0	1/1:3,19:22:57.07:543,57,0	1/1:2,30:32:84.13:811,84,0	1/1:0,13:13:36.06:347,36,0
chr10	21614313	.	A	ATT	10802.89	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-7.033;DP=572;FS=6.392;HRun=10;HaplotypeScore=73.7888;InbreedingCoeff=0.9492;MQ=73.76;MQ0=1;MQRankSum=-0.339;QD=26.35;ReadPosRankSum=0.782;VQSLOD=4.7138;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,0:24:44.92:158,45,0	0/0:5,0:5:15.03:0,15,153	0/0:13,0:10:12.69:0,13,68	0/0:18,0:16:1.64:0,2,72	1/1:7,17:24:54.09:720,54,0	1/1:4,17:21:39.13:581,39,0	1/1:0,15:17:35.60:485,36,0	1/1:8,0:36:34.91:256,35,0	1/1:4,17:23:50.65:708,51,0	1/1:3,19:23:57.19:848,57,0	1/1:1,21:23:62.65:873,63,0	1/1:4,15:20:41.63:591,42,0	1/1:2,17:19:36.12:537,36,0	1/1:3,11:16:23.57:321,24,0	0/0:3,0:22:43.89:0,44,190	0/0:22,0:22:48.02:0,48,481	0/0:35,0:35:98.71:0,99,959	1/1:2,18:20:45.15:672,45,0	0/0:16,0:16:30.04:0,30,304	0/0:18,0:18:51.11:0,51,519	0/0:12,0:12:24.01:0,24,244	1/1:2,17:18:46.78:618,47,0	1/1:3,15:22:38.41:511,38,0	1/1:5,19:24:45.15:671,45,0	1/1:1,22:26:59.17:823,59,0	1/1:4,23:28:70.23:952,70,0	1/1:5,13:17:24.08:345,24,0	1/1:0,6:7:9.03:134,9,0
chr10	21614519	.	TA	T	4260.32	PASS	AB=0.723;AC=36;AF=0.643;AN=56;BaseQRankSum=6.821;DP=470;FS=15.051;HRun=13;HaplotypeScore=52.3508;InbreedingCoeff=0.8014;MQ=78.08;MQ0=1;MQRankSum=1.561;QD=13.74;ReadPosRankSum=4.850;VQSLOD=3.5560;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,9:10:25.90:181,26,0	0/0:3,0:4:8.85:0,9,73	0/0:19,0:12:12.60:0,13,116	0/0:17,0:15:4.61:0,5,89	1/1:5,19:24:32.95:359,33,0	1/1:2,17:19:38.77:284,39,0	1/1:7,12:19:32.73:236,33,0	0/0:23,3:26:7.17:0,7,370	1/1:3,11:16:27.93:187,28,0	1/1:5,6:11:11.88:87,12,0	1/1:2,14:17:17.61:264,18,0	1/1:1,9:11:16.95:115,17,0	1/1:6,22:29:43.73:312,44,0	1/1:1,13:15:34.85:247,35,0	0/0:20,2:22:20.14:0,20,349	0/0:22,1:23:40.92:0,41,539	0/0:22,2:24:29.05:0,29,419	1/1:1,19:21:49.76:356,50,0	0/0:13,1:14:9.01:0,9,237	0/1:16,2:18:8.54:9,0,235	0/0:9,0:9:12.91:0,13,119	1/1:3,16:19:44.72:328,45,0	0/1:2,10:12:2.48:148,0,2	1/1:1,11:12:32.81:241,33,0	1/1:1,14:16:37.83:269,38,0	1/1:3,14:18:40.76:287,41,0	1/1:3,13:17:8.83:218,9,0	1/1:0,6:6:17.90:131,18,0
chr10	21614836	.	ATT	A	1626.62	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=7.121;DP=599;FS=0.874;HRun=11;HaplotypeScore=164.9629;InbreedingCoeff=0.9858;MQ=78.46;MQ0=1;MQRankSum=-4.160;QD=12.05;ReadPosRankSum=-1.793;VQSLOD=0.2452;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:42.34:0,42,221	1/1:9,0:9:11.61:79,12,0	0/0:22,0:19:40.42:0,40,386	0/0:24,0:22:23.57:0,24,257	0/0:37,0:37:76.98:0,77,329	0/0:19,0:19:42.05:0,42,136	0/0:22,0:22:32.89:0,33,124	1/1:28,2:30:48.70:367,49,0	0/0:18,0:19:34.56:0,35,139	0/0:24,0:24:44.24:0,44,193	0/0:22,0:22:40.66:0,41,162	0/0:29,0:29:44.33:0,44,149	0/0:15,0:15:27.88:0,28,97	0/0:26,0:26:47.19:0,47,175	0/0:28,0:28:72.24:0,72,1086	1/1:21,2:24:55.02:451,55,0	1/1:18,1:19:36.92:240,37,0	0/0:19,0:19:39.12:0,39,176	1/1:22,2:24:45.31:284,45,0	1/1:20,1:21:45.49:314,45,0	1/1:8,0:8:11.66:87,12,0	0/0:15,0:15:30.92:0,31,141	0/0:22,0:22:45.11:0,45,146	0/0:10,0:10:21.34:0,21,86	0/0:26,0:26:53.97:0,54,196	0/0:17,0:17:29.65:0,30,116	0/0:19,0:19:32.10:0,32,117	0/0:16,0:16:25.79:0,26,100
chr10	21614845	.	T	TAAA	4498.49	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-8.849;DP=580;FS=0.000;HRun=0;HaplotypeScore=172.1211;InbreedingCoeff=0.9877;MQ=80.72;MQ0=1;MQRankSum=-5.288;QD=38.12;ReadPosRankSum=-2.058;VQSLOD=4.8206;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:72.22:0,72,388	1/1:0,5:7:12.04:234,12,0	0/0:26,0:22:53.68:0,54,609	0/0:24,0:22:34.59:0,35,423	0/0:34,0:34:93.83:0,94,580	0/0:20,0:20:52.25:0,52,262	0/0:20,0:20:44.79:0,45,237	1/1:10,13:23:53.88:711,54,0	0/0:19,0:19:47.57:0,48,286	0/0:27,0:27:66.43:0,66,378	0/0:22,0:22:58.64:0,59,328	0/0:24,0:24:55.79:0,56,259	0/0:18,0:18:30.43:0,30,187	0/0:27,0:27:60.14:0,60,304	0/0:25,0:25:75.26:0,75,1371	1/1:7,16:23:41.49:985,41,0	1/1:3,14:18:38.92:717,39,0	0/0:18,0:18:43.88:0,44,290	1/1:4,13:19:48.44:747,48,0	1/1:1,16:20:53.44:917,53,0	1/1:1,6:8:11.71:188,12,0	0/0:17,0:17:44.31:0,44,274	0/0:24,0:24:54.85:0,55,260	0/0:9,0:9:24.20:0,24,139	0/0:27,0:27:70.10:0,70,376	0/0:16,0:16:37.91:0,38,211	0/0:20,0:20:38.79:0,39,216	0/0:11,0:11:30.62:0,31,154
chr10	21614846	.	T	TA	10991.59	PASS	AB=1.000;AC=51;AF=0.911;AN=56;BaseQRankSum=3.648;DP=570;FS=0.459;HRun=0;HaplotypeScore=122.9778;InbreedingCoeff=0.7473;MQ=79.02;MQ0=1;MQRankSum=-0.618;QD=20.98;ReadPosRankSum=7.970;VQSLOD=6.1185;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,31:34:34.76:782,35,0	1/1:5,0:5:10.62:44,11,0	0/1:25,0:22:30.67:31,0,238	0/0:21,0:19:16.99:0,17,202	1/1:4,31:35:77.43:917,77,0	1/1:2,18:20:44.72:580,45,0	1/1:2,19:21:45.89:551,46,0	1/1:21,0:21:22.31:143,22,0	1/1:7,12:19:32.56:447,33,0	1/1:5,22:27:46.18:637,46,0	1/1:2,20:22:45.42:567,45,0	1/1:0,24:24:63.18:724,63,0	1/1:2,16:18:29.91:371,30,0	1/1:1,26:27:63.18:725,63,0	0/0:25,0:25:75.24:0,75,1009	1/1:22,1:23:27.02:180,27,0	1/1:17,0:17:35.86:161,36,0	1/1:6,11:17:18.79:359,19,0	1/1:18,0:18:28.87:144,29,0	1/1:18,0:18:38.69:182,39,0	1/1:8,0:8:13.29:53,13,0	1/1:2,15:17:35.53:434,36,0	1/1:0,24:24:59.74:691,60,0	1/1:2,7:9:24.02:259,24,0	1/1:3,23:26:63.23:760,63,0	1/1:3,15:18:21.62:444,22,0	1/1:1,18:20:41.71:462,42,0	1/1:0,10:10:30.09:343,30,0
chr10	21614847	.	T	TAA	14680.57	PASS	AB=1.000;AC=52;AF=0.929;AN=56;BaseQRankSum=3.103;DP=585;FS=2.969;HRun=5;HaplotypeScore=126.4257;InbreedingCoeff=0.6160;MQ=76.75;MQ0=1;MQRankSum=-1.817;QD=26.22;ReadPosRankSum=2.477;VQSLOD=3.2949;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:34,1:35:74.45:905,74,0	1/1:5,0:5:12.01:110,12,0	0/1:24,0:20:2.25:2,0,259	0/1:20,0:19:8.61:9,0,179	1/1:33,1:34:92.09:1073,92,0	1/1:20,0:20:51.16:623,51,0	1/1:22,0:22:51.62:628,52,0	1/1:22,0:25:67.82:607,68,0	1/1:18,1:19:45.13:560,45,0	1/1:26,1:27:70.71:890,71,0	1/1:21,0:21:54.64:672,55,0	1/1:24,0:24:63.20:803,63,0	1/1:18,0:18:34.05:411,34,0	1/1:28,0:28:65.01:781,65,0	0/0:25,0:25:69.15:0,69,850	1/1:24,0:24:63.94:563,64,0	1/1:20,0:20:51.01:490,51,0	1/1:16,1:17:40.51:460,41,0	1/1:22,0:23:62.30:608,62,0	1/1:21,0:21:62.66:576,63,0	1/1:7,0:8:12.42:116,12,0	1/1:17,0:17:44.41:526,44,0	1/1:24,0:24:59.65:737,60,0	1/1:8,0:8:22.88:254,23,0	1/1:26,0:26:68.03:833,68,0	1/1:18,0:18:48.57:597,49,0	1/1:21,0:21:41.94:481,42,0	1/1:10,0:10:30.09:363,30,0
chr10	21615684	.	AT	A	4211.38	PASS	AB=0.600;AC=13;AF=0.232;AN=56;BaseQRankSum=11.197;DP=601;FS=2.552;HRun=7;HaplotypeScore=57.8061;InbreedingCoeff=0.9004;MQ=88.70;MQ0=0;MQRankSum=-1.153;QD=26.00;ReadPosRankSum=-0.922;VQSLOD=5.1399;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,117,1443	0/1:3,6:9:19.70:135,0,20	0/0:27,0:27:60.08:0,60,710	0/0:18,0:18:33.96:0,34,394	0/0:23,0:23:57.17:0,57,706	0/0:24,0:24:66.19:0,66,806	0/0:27,0:27:72.21:0,72,892	1/1:4,30:34:90.09:870,90,0	0/0:19,0:19:54.17:0,54,679	0/0:14,0:14:39.12:0,39,491	0/0:28,0:28:60.19:0,60,755	0/0:18,0:18:54.17:0,54,679	0/0:18,0:18:51.14:0,51,618	0/0:12,0:12:36.12:0,36,453	0/0:19,0:19:54.16:0,54,667	1/1:0,26:26:72.16:735,72,0	1/1:0,35:35:93.21:949,93,0	0/0:19,0:18:54.05:0,54,641	1/1:3,18:21:51.06:495,51,0	1/1:3,26:29:78.12:784,78,0	1/1:0,8:8:24.05:245,24,0	0/0:16,0:16:48.14:0,48,590	0/0:15,0:15:39.12:0,39,490	0/0:18,0:18:51.15:0,51,629	0/0:22,0:22:63.16:0,63,736	0/0:21,0:21:60.18:0,60,743	0/0:26,0:26:75.21:0,75,917	0/0:13,0:13:39.09:0,39,462
chr10	21616250	.	AT	A	11288.64	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=8.039;DP=711;FS=4.140;HRun=9;HaplotypeScore=130.8402;InbreedingCoeff=0.9818;MQ=69.56;MQ0=0;MQRankSum=-10.632;QD=23.42;ReadPosRankSum=3.377;VQSLOD=3.6854;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,37:40:99:931,102,0	0/0:8,0:8:15.04:0,15,171	0/0:25,0:25:59.64:0,60,649	0/0:14,1:15:29.57:0,30,363	1/1:6,26:32:84.03:766,84,0	1/1:7,15:22:48:435,48,0	1/1:3,28:31:90.03:818,90,0	0/0:20,0:20:54.13:0,54,610	1/1:2,19:21:25.75:487,26,0	1/1:5,17:22:54.01:492,54,0	1/1:3,21:24:66.01:599,66,0	1/1:3,38:41:99:988,108,0	1/1:7,21:28:72.03:658,72,0	1/1:1,31:33:95.07:852,95,0	0/0:25,0:26:66.03:0,66,741	0/0:26,0:26:72.15:0,72,799	0/0:34,0:34:93.26:0,93,1063	1/1:5,15:20:34.40:398,34,0	0/0:24,0:25:57.13:0,57,640	0/0:25,0:25:68.99:0,69,772	0/0:25,0:25:63.19:0,63,727	1/1:2,15:17:48.02:438,48,0	1/1:4,11:15:39:352,39,0	1/1:6,29:35:84.03:768,84,0	1/1:6,22:28:60:543,60,0	1/1:9,31:40:99:975,108,0	1/1:3,28:31:80.99:735,81,0	1/1:0,2:2:6:55,6,0
chr10	21617394	.	T	TC	1934.86	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=-1.442;DP=474;FS=12.393;HRun=9;HaplotypeScore=56.9897;InbreedingCoeff=0.8353;MQ=80.68;MQ0=0;MQRankSum=-1.686;QD=10.13;ReadPosRankSum=-4.532;VQSLOD=-0.1019;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,28:36:68.32:790,68,0	1/1:1,0:4:2.84:14,3,0	0/0:16,0:17:13.53:0,14,200	0/1:12,0:12:3.37:3,0,105	0/0:12,0:12:26.96:0,27,231	0/0:12,0:12:23.99:0,24,208	0/0:23,0:23:59.96:0,60,517	1/1:11,0:18:24.55:144,25,0	0/0:20,0:20:53.99:0,54,469	0/0:15,0:15:29.98:0,30,260	0/0:16,0:16:41.99:0,42,363	0/0:18,0:18:44.92:0,45,383	0/0:25,0:25:62.97:0,63,547	0/0:19,0:19:53.95:0,54,461	0/0:24,0:24:65.97:0,66,573	1/1:1,0:8:2.84:14,3,0	1/1:10,0:20:14.02:81,14,0	0/0:13,1:14:5.81:0,6,279	1/1:6,1:16:29.27:187,29,0	1/1:0,1:5:8.63:48,9,0	1/1:9,0:21:8.61:46,9,0	0/0:15,0:15:35.97:0,36,310	0/0:14,0:14:29.98:0,30,260	0/0:27,0:27:77.94:0,78,670	0/0:12,0:12:28.80:0,29,239	1/1:7,17:24:19:408,19,0	1/1:9,11:21:7.03:305,7,0	1/1:1,4:5:9.02:100,9,0
chr10	21618799	.	C	CATT	11039.33	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-14.153;DP=692;FS=0.677;HRun=0;HaplotypeScore=89.1629;InbreedingCoeff=0.9991;MQ=77.88;MQ0=0;MQRankSum=-4.431;QD=60.00;ReadPosRankSum=-0.989;VQSLOD=6.2780;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,102,1883	1/1:0,11:14:29.97:627,30,0	0/0:19,0:18:51.16:0,51,901	0/0:14,0:14:36.59:0,37,518	0/0:25,0:25:75.20:0,75,1328	0/0:23,0:23:69.15:0,69,1186	0/0:24,0:24:69.21:0,69,1234	1/1:2,39:44:99:2782,129,0	0/0:29,0:29:84.22:0,84,1455	0/0:27,0:27:81.23:0,81,1422	0/0:19,0:19:53.97:0,54,896	0/0:26,0:26:78.20:0,78,1350	0/0:31,0:31:90.31:0,90,1650	0/0:25,0:25:75.24:0,75,1352	0/0:26,0:25:78.27:0,78,1421	1/1:0,32:34:81.28:1993,81,0	1/1:0,21:21:48.16:1182,48,0	0/0:15,0:15:36.12:0,36,670	1/1:0,19:19:57.18:1317,57,0	1/1:1,29:30:72.23:1921,72,0	1/1:1,20:22:51.17:1218,51,0	0/0:27,0:27:78.19:0,78,1352	0/0:19,0:19:57.17:0,57,993	0/0:31,0:30:93.26:0,93,1690	0/0:18,0:18:54.11:0,54,933	0/0:35,0:35:99:0,105,1829	0/0:33,0:33:99:0,99,1743	0/0:7,0:7:21.07:0,21,390
chr10	21618995	.	CA	C	797.73	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.443;DP=750;FS=1.651;HRun=3;HaplotypeScore=70.2958;InbreedingCoeff=0.9986;MQ=87.41;MQ0=0;MQRankSum=-2.156;QD=29.55;ReadPosRankSum=1.150;VQSLOD=3.1919;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,26:27:72.23:893,72,0	0/0:12,0:12:36.12:0,36,518	0/0:26,0:26:35.18:0,35,886	0/0:27,0:27:70.11:0,70,966	0/0:27,0:27:78.26:0,78,1122	0/0:22,0:22:66.22:0,66,950	0/0:25,0:25:69.23:0,69,994	0/0:35,0:35:99:0,102,1447	0/0:24,0:24:72.23:0,72,1015	0/0:31,0:31:84.28:0,84,1209	0/0:24,0:24:69.23:0,69,992	0/0:31,0:31:90.29:0,90,1277	0/0:43,0:43:99:0,129,1840	0/0:26,0:26:69.23:0,69,993	0/0:36,0:36:99:0,102,1423	0/0:40,0:40:99:0,117,1666	0/0:15,0:15:45.15:0,45,647	0/0:10,0:10:27.09:0,27,389	0/0:24,0:24:63.19:0,63,875	0/0:38,0:38:99:0,105,1512	0/0:26,0:26:75.25:0,75,1079	0/0:25,0:25:72.24:0,72,1036	0/0:28,0:28:81.26:0,81,1149	0/0:33,0:33:96.31:0,96,1363	0/0:25,0:25:72.24:0,72,1037	0/0:25,0:25:75.24:0,75,1064	0/0:32,0:32:96.28:0,96,1343	0/0:13,0:13:39.10:0,39,524
chr10	21620754	.	G	GAA	17599.43	PASS	AB=1.000;AC=51;AF=0.911;AN=56;BaseQRankSum=-6.802;DP=641;FS=7.305;HRun=10;HaplotypeScore=79.4419;InbreedingCoeff=0.8310;MQ=76.53;MQ0=3;MQRankSum=-5.061;QD=29.33;ReadPosRankSum=0.155;VQSLOD=4.8346;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,31:39:77.74:1111,78,0	1/1:1,5:6:12.93:181,13,0	0/0:16,0:15:15.27:0,15,188	0/1:23,0:22:4.18:4,0,230	1/1:1,15:17:42.14:613,42,0	1/1:5,18:25:71.20:984,71,0	1/1:3,18:22:44.64:629,45,0	1/1:4,18:26:65.65:882,66,0	1/1:2,20:23:57.18:823,57,0	1/1:7,20:31:68.59:858,69,0	1/1:3,14:19:20.05:576,20,0	1/1:5,18:23:48.12:690,48,0	1/1:4,15:23:49.62:631,50,0	1/1:2,11:18:41.10:516,41,0	0/0:22,0:23:62.85:0,63,620	1/1:3,17:21:42.14:627,42,0	1/1:1,19:23:56.12:753,56,0	1/1:4,15:20:44.74:636,45,0	1/1:6,19:27:56.65:787,57,0	1/1:4,17:22:52.87:678,53,0	1/1:1,14:15:30.10:447,30,0	1/1:3,14:19:44.59:583,45,0	1/1:3,20:24:51.87:690,52,0	1/1:1,23:30:64.16:823,64,0	1/1:2,15:21:40.59:503,41,0	1/1:3,16:20:45.14:648,45,0	1/1:3,29:35:80.24:1129,80,0	1/1:2,23:27:56.67:797,57,0
chr10	21620986	.	G	GAAAAA	13550.64	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=0.815;DP=539;FS=0.757;HRun=11;HaplotypeScore=129.7701;InbreedingCoeff=0.8350;MQ=70.13;MQ0=0;MQRankSum=-4.590;QD=27.54;ReadPosRankSum=-4.059;VQSLOD=2.1456;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:12,14:31:34.88:735,35,0	1/1:1,0:8:20.46:182,20,0	0/0:10,0:10:8.80:0,9,105	0/0:12,0:13:8.27:0,8,110	1/1:16,3:28:58.34:1040,58,0	1/1:13,9:27:44.52:1039,45,0	1/1:12,7:24:39.13:893,39,0	1/1:14,0:32:49.04:591,49,0	1/1:10,9:20:30.10:742,30,0	1/1:16,5:24:43.92:809,44,0	1/1:9,5:19:34.61:666,35,0	1/1:7,3:11:17.42:331,17,0	1/1:10,2:20:24.08:525,24,0	1/1:9,0:13:12.04:187,12,0	0/0:24,0:23:37.16:0,37,863	1/1:7,0:22:29.72:325,30,0	1/1:7,0:24:47.39:456,47,0	1/1:9,4:14:12.04:293,12,0	1/1:12,0:24:39.09:463,39,0	1/1:8,0:21:40.21:391,40,0	1/1:6,0:12:15.91:153,16,0	1/1:5,8:17:42:783,42,0	1/1:15,7:23:33.36:622,33,0	1/1:5,1:19:9.03:186,9,0	1/1:3,5:11:18.06:428,18,0	1/1:11,5:20:41.50:882,42,0	1/1:10,5:17:21.54:517,22,0	1/1:1,5:10:2.03:312,2,0
chr10	21621474	.	T	TAGATAG	960.13	PASS	AB=1.000;AC=21;AF=0.553;AN=38;BaseQRankSum=0.032;DP=194;FS=11.133;HRun=0;HaplotypeScore=52.0166;InbreedingCoeff=0.5049;MQ=75.74;MQ0=17;MQRankSum=-0.908;QD=12.97;ReadPosRankSum=-0.921;VQSLOD=0.3052;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,0:11:3.01:50,3,0	./.	0/0:10,0:5:5.56:0,6,63	0/0:25,0:12:4.37:0,4,100	1/1:7,0:6:3.01:49,3,0	1/1:8,0:8:6:74,6,0	1/1:5,0:5:5.98:71,6,0	0/0:13,0:9:15:0,15,180	0/0:3,0:3:0:0,0,0	1/1:2,6:7:14.96:295,15,0	1/1:2,0:1:3.01:50,3,0	./.	./.	1/1:4,0:4:3:25,3,0	0/0:17,0:16:36.14:0,36,843	./.	0/0:9,0:8:5.60:0,6,70	1/1:6,5:11:14.07:229,14,0	0/0:5,0:2:4.09:0,4,17	./.	0/0:5,0:4:6.01:0,6,73	./.	./.	./.	./.	0/1:7,0:7:10.51:71,0,11	1/1:7,0:7:6.81:90,7,0	1/1:2,0:2:6.02:94,6,0
chr10	21621476	.	TAGATAG	T	176.84	PASS	AB=1.000;AC=5;AF=0.119;AN=42;BaseQRankSum=-2.414;DP=187;FS=11.338;HRun=0;HaplotypeScore=46.4834;InbreedingCoeff=0.1048;MQ=77.77;MQ0=15;MQRankSum=-0.768;QD=5.36;ReadPosRankSum=-2.097;VQSLOD=-0.2078;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:9:3.01:0,3,50	./.	0/0:10,0:5:12.01:0,12,134	0/0:25,0:12:22.96:0,23,285	0/0:6,0:5:3.01:0,3,73	0/0:7,0:7:6.02:0,6,143	0/0:5,0:5:9.03:0,9,141	0/1:14,0:10:13.04:164,0,13	./.	0/0:7,0:6:17.99:0,18,421	0/0:2,0:1:3.01:0,3,105	./.	0/0:4,0:4:9.01:0,9,111	0/0:3,0:3:3.01:0,3,50	0/0:18,0:17:48.16:0,48,1442	./.	0/1:9,0:8:14.70:34,0,15	0/0:11,0:11:14.84:0,15,299	0/1:5,0:2:10.22:10,0,10	./.	1/1:5,0:4:6:73,6,0	./.	0/0:5,0:4:3.01:0,3,47	./.	0/0:7,0:7:14.91:0,15,173	0/0:6,0:6:12.04:0,12,251	0/0:5,0:5:9.03:0,9,178	0/0:4,0:4:12.04:0,12,193
chr10	21621826	.	AC	A	11444.58	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=0.102;DP=602;FS=9.247;HRun=9;HaplotypeScore=68.7104;InbreedingCoeff=0.8907;MQ=77.84;MQ0=0;MQRankSum=-3.721;QD=21.15;ReadPosRankSum=3.220;VQSLOD=5.5140;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,22:33:50.99:466,51,0	1/1:0,7:7:18.01:165,18,0	0/0:19,0:19:9.97:0,10,263	0/0:14,0:14:20.97:0,21,209	1/1:7,13:20:47.91:425,48,0	1/1:10,14:24:63.02:575,63,0	1/1:4,21:25:60.03:549,60,0	1/1:9,26:35:68.99:632,69,0	1/1:4,22:26:66.04:604,66,0	1/1:1,21:22:63.01:571,63,0	1/1:2,13:15:42.02:381,42,0	1/1:3,22:25:53.98:494,54,0	1/1:2,21:23:63.03:576,63,0	1/1:4,26:30:75.04:686,75,0	0/0:28,0:28:81.23:0,81,926	1/1:7,18:25:66.03:603,66,0	1/1:6,39:45:99:932,102,0	1/1:3,13:16:33.01:302,33,0	1/1:4,12:16:33:300,33,0	1/1:4,7:11:26.94:236,27,0	1/1:4,18:22:57.03:522,57,0	1/1:7,22:29:69.03:630,69,0	1/1:2,7:9:5.84:101,6,0	1/1:1,20:21:57.02:521,57,0	1/1:1,10:11:6.44:224,6,0	1/1:10,12:22:41.94:375,42,0	1/1:3,20:23:54.02:494,54,0	1/1:1,5:6:9:82,9,0
chr10	21624213	.	A	AT	1606.82	PASS	AB=0.833;AC=42;AF=0.808;AN=52;BaseQRankSum=4.736;DP=188;FS=0.945;HRun=1;HaplotypeScore=138.5122;InbreedingCoeff=0.4802;MQ=66.13;MQ0=11;MQRankSum=-2.116;QD=16.57;ReadPosRankSum=1.492;VQSLOD=3.9534;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,4:6:4.81:35,5,0	1/1:0,1:1:3.01:34,3,0	0/0:33,0:10:9.95:0,10,142	0/0:41,0:11:17.26:0,17,150	1/1:0,4:4:8.48:57,8,0	1/1:0,4:4:11.19:85,11,0	./.	0/0:11,0:8:6.34:0,6,40	1/1:0,3:4:11.03:92,11,0	1/1:0,8:8:3.79:200,4,0	1/1:0,3:3:8.76:79,9,0	1/1:0,5:5:14.95:141,15,0	1/1:0,2:2:5.87:36,6,0	1/1:0,4:5:14.88:134,15,0	1/1:4,2:5:5.51:57,6,0	0/1:3,3:6:0.65:45,0,1	0/0:3,1:4:3.15:0,3,13	1/1:0,4:4:12:105,12,0	0/1:5,0:5:0.15:0,0,31	1/1:2,3:5:9.29:81,9,0	./.	1/1:0,2:2:1.11:25,1,0	1/1:0,3:3:4.94:22,5,0	1/1:4,1:5:3.01:33,3,0	1/1:0,6:7:16.32:159,16,0	1/1:0,6:6:18.04:187,18,0	1/1:0,5:5:14.81:117,15,0	1/1:0,0:1:2.99:23,3,0
chr10	21624214	.	G	GCTCTTC	4894.43	PASS	AB=0.857;AC=43;AF=0.827;AN=52;BaseQRankSum=7.479;DP=192;FS=0.000;HRun=0;HaplotypeScore=133.1269;InbreedingCoeff=0.5300;MQ=65.51;MQ0=13;MQRankSum=-0.903;QD=49.44;ReadPosRankSum=2.464;VQSLOD=4.9417;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,4:6:15.02:252,15,0	1/1:0,1:1:3.01:61,3,0	0/0:33,0:10:19.20:0,19,260	0/0:41,0:11:20.89:0,21,254	1/1:0,4:4:9.03:177,9,0	1/1:0,4:4:12.04:281,12,0	./.	0/0:12,0:8:0.60:0,1,161	1/1:1,3:4:12.04:253,12,0	1/1:2,6:8:5.32:461,5,0	1/1:0,3:3:8.96:149,9,0	1/1:0,5:5:15.05:385,15,0	1/1:0,2:2:6.02:117,6,0	1/1:1,4:5:15.05:356,15,0	1/1:4,2:5:6.49:106,6,0	1/1:3,3:6:12.51:244,13,0	0/1:5,1:6:7.55:50,0,8	1/1:0,4:4:12.04:290,12,0	0/0:5,0:5:15.02:0,15,195	1/1:2,3:5:8.73:175,9,0	./.	1/1:0,2:2:6.02:111,6,0	1/1:0,3:3:6.02:107,6,0	1/1:4,1:5:3.01:56,3,0	1/1:1,6:7:21.07:461,21,0	1/1:0,6:6:18.06:426,18,0	1/1:0,5:5:15.05:323,15,0	1/1:1,0:1:3.01:52,3,0
chr10	21624215	.	AG	A	432.74	PASS	AB=0.583;AC=30;AF=0.577;AN=52;BaseQRankSum=5.042;DP=197;FS=2.167;HRun=1;HaplotypeScore=143.3205;InbreedingCoeff=0.4560;MQ=64.84;MQ0=13;MQRankSum=0.213;QD=6.01;ReadPosRankSum=3.963;VQSLOD=0.9685;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,4:6:1.70:15,2,0	0/0:2,1:3:2.04:0,2,6	0/0:33,0:10:7.87:0,8,172	0/0:41,0:11:16.60:0,17,142	0/0:0,4:4:2.49:0,2,6	1/1:0,4:4:8.29:32,8,0	./.	0/0:12,0:8:18.71:0,19,210	1/1:1,3:4:4.07:16,4,0	1/1:3,6:8:7.58:140,8,0	1/1:0,3:3:1.53:4,2,0	1/1:0,5:5:6.91:31,7,0	1/1:0,2:2:3.78:11,4,0	1/1:1,4:5:6.69:28,7,0	0/0:5,2:6:0:0,0,1	0/1:3,3:6:21.07:21,0,27	0/0:5,1:6:0.36:0,0,32	1/1:0,4:4:11.63:68,12,0	0/0:6,0:6:17.64:0,18,188	0/0:3,3:6:1.81:0,2,5	./.	0/1:0,2:2:3.61:4,0,4	1/1:0,3:3:3.06:8,3,0	0/0:4,1:5:0:0,0,0	1/1:1,6:7:6.07:29,6,0	1/1:0,6:6:17.86:130,18,0	1/1:0,5:5:7.71:35,8,0	1/1:1,0:1:2.60:10,3,0
chr10	21625056	.	G	GAACAACAACAAC	14499.09	PASS	AC=48;AF=0.889;AN=54;BaseQRankSum=2.152;DP=650;FS=5.362;HRun=0;HaplotypeScore=189.5001;InbreedingCoeff=0.6169;MQ=67.58;MQ0=0;MQRankSum=-4.944;QD=26.75;ReadPosRankSum=-2.678;VQSLOD=3.6940;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:10,5:19:15.05:873,15,0	1/1:6,0:6:6.02:298,6,0	0/0:31,0:24:9.03:0,9,177	0/0:32,0:27:3.01:0,3,93	1/1:8,0:13:9.03:237,9,0	1/1:20,0:39:9.03:469,9,0	1/1:32,0:32:45.03:1438,45,0	1/1:35,0:35:42.11:1136,42,0	1/1:18,0:30:6.02:313,6,0	1/1:13,0:26:21:455,21,0	1/1:11,0:11:18.03:444,18,0	1/1:15,0:27:3.01:156,3,0	1/1:23,0:37:3.01:156,3,0	1/1:17,0:42:9.03:470,9,0	0/0:40,0:40:71.90:0,72,1815	1/1:30,0:30:27.09:1330,27,0	1/1:11,0:11:8.98:163,9,0	1/1:17,0:17:21.04:588,21,0	1/1:19,0:19:13.87:210,14,0	./.	1/1:26,0:26:24.95:711,25,0	1/1:9,0:9:15.05:641,15,0	1/1:9,0:9:18.02:474,18,0	1/1:15,0:29:12.04:614,12,0	1/1:17,0:17:27.02:789,27,0	1/1:13,6:28:39.54:1052,40,0	1/1:7,10:26:24.08:1384,24,0	1/1:3,0:4:3.01:97,3,0
chr10	21625058	.	A	ACAACAACAACAACAG	14611.13	PASS	AB=1.000;AC=31;AF=0.554;AN=56;BaseQRankSum=6.342;DP=673;FS=5.506;HRun=0;HaplotypeScore=225.5628;InbreedingCoeff=-0.3929;MQ=64.01;MQ0=1;MQRankSum=-6.447;QD=25.54;ReadPosRankSum=-2.308;VQSLOD=2.7950;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:19,0:19:99:667,0,113	1/1:0,6:9:8.95:452,9,0	0/0:32,0:25:33.01:0,33,420	0/0:29,0:24:32.20:0,32,461	0/1:13,0:13:98.86:237,0,99	0/1:39,0:39:99:488,0,188	0/1:32,0:32:99:1520,0,134	0/1:37,0:37:99:749,0,254	0/1:30,0:30:99:306,0,252	0/1:25,0:25:99:310,0,217	0/1:12,0:12:42.37:304,0,42	0/1:27,0:27:99:146,0,172	0/1:37,0:37:99:120,0,326	0/1:43,0:43:99:483,0,226	0/0:40,0:40:96.23:0,96,2629	1/1:6,24:40:27.09:1941,27,0	1/1:11,0:11:26.75:389,27,0	0/1:17,0:17:70.39:533,0,70	1/1:24,0:24:50.20:793,50,0	1/1:5,0:5:5.88:36,6,0	1/1:27,0:27:38.36:979,38,0	0/1:8,0:8:37.83:598,0,38	0/1:10,0:10:50.42:423,0,50	0/1:30,0:30:99:843,0,114	0/1:18,0:18:34.54:650,0,35	0/1:28,0:28:99:644,0,131	0/1:27,0:27:55.84:944,0,56	0/1:4,0:3:39.95:58,0,40
chr10	21630070	.	GGTGTGTGTGT	G	1894.77	PASS	AB=0.778;AC=27;AF=0.519;AN=52;BaseQRankSum=5.514;DP=594;FS=33.349;HRun=0;HaplotypeScore=166.2768;InbreedingCoeff=0.1881;MQ=75.24;MQ0=22;MQRankSum=-3.741;QD=6.82;ReadPosRankSum=-1.188;VQSLOD=1.1801;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:33:8.98:0,9,72	0/1:6,0:8:17.95:24,0,18	./.	0/0:60,0:32:0.47:0,0,1	./.	0/1:19,1:22:14.65:185,0,15	0/1:11,6:17:17.51:69,0,18	0/0:25,0:24:2.92:0,3,17	1/1:17,3:21:17.88:292,18,0	1/1:12,0:12:5.96:44,6,0	0/0:11,4:15:2.96:0,3,20	1/1:16,6:22:1:86,1,0	1/1:15,3:18:3.48:89,3,0	1/1:17,4:21:3.01:88,3,0	0/0:19,0:20:19.88:0,20,747	0/1:16,1:24:50.32:213,0,50	1/1:19,1:27:5.42:195,5,0	0/0:15,4:18:2.98:0,3,22	0/0:10,0:9:5.44:0,5,33	1/1:13,0:17:3:30,3,0	0/0:17,0:16:2.95:0,3,20	0/0:11,0:16:5.49:0,5,69	1/1:13,5:18:3.48:89,3,0	0/0:20,7:27:2.84:0,3,22	0/1:11,7:18:16:166,0,16	1/1:11,3:14:1.02:125,1,0	1/1:7,4:11:9.03:263,9,0	1/1:5,2:7:3.01:88,3,0
chr10	21630420	.	GAAAAC	G	21150.79	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=6.933;DP=767;FS=6.353;HRun=0;HaplotypeScore=149.4039;InbreedingCoeff=0.9842;MQ=67.28;MQ0=6;MQRankSum=-1.630;QD=31.43;ReadPosRankSum=2.440;VQSLOD=4.0307;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,29:41:63.22:1164,63,0	1/1:0,8:8:21.07:388,21,0	0/0:36,0:26:25.39:0,25,606	0/0:25,0:14:12.01:0,12,233	1/1:5,20:25:45.08:758,45,0	1/1:9,22:31:63.22:1164,63,0	1/1:4,13:17:26.12:429,26,0	1/1:15,19:34:57.13:829,57,0	1/1:3,20:23:54.18:998,54,0	1/1:6,26:32:78.23:1364,78,0	1/1:8,14:20:42.14:717,42,0	1/1:7,19:26:39.13:721,39,0	1/1:9,23:32:67.47:1221,67,0	1/1:11,27:38:69.24:1275,69,0	0/0:32,0:32:72.23:0,72,1905	1/1:10,26:36:54.18:998,54,0	1/1:9,21:30:60.21:1109,60,0	1/1:8,15:23:30.10:555,30,0	1/1:11,13:24:39.03:531,39,0	1/1:8,25:33:60.20:1035,60,0	1/1:7,11:18:21.07:388,21,0	1/1:10,15:26:30.10:455,30,0	1/1:4,18:22:48.16:887,48,0	1/1:8,27:35:72.25:1311,72,0	1/1:8,17:25:33.08:610,33,0	1/1:7,17:24:54.08:938,54,0	1/1:11,23:33:42.14:752,42,0	1/1:1,13:14:30.10:554,30,0
chr10	21630945	.	A	ATCCCAAG	52893.65	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-7.129;DP=676;FS=5.040;HRun=0;HaplotypeScore=136.0984;InbreedingCoeff=0.9516;MQ=71.36;MQ0=2;MQRankSum=-14.750;QD=93.12;ReadPosRankSum=3.259;VQSLOD=6.2711;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,10:26:45.15:1512,45,0	1/1:3,6:11:24.08:882,24,0	0/0:25,0:24:57.17:0,57,1377	0/0:16,0:16:42.14:0,42,1057	1/1:7,22:32:72.05:2298,72,0	1/1:8,15:24:69.24:2491,69,0	1/1:10,14:26:75.19:2471,75,0	0/0:34,0:34:99:0,99,2488	1/1:4,17:24:63.22:2428,63,0	1/1:5,17:23:66.23:2547,66,0	1/1:7,17:27:60.20:1749,60,0	1/1:6,26:33:96.33:3760,96,0	1/1:5,16:20:57.20:2154,57,0	1/1:6,14:23:51.18:2023,51,0	0/0:33,0:33:87.30:0,87,2273	1/1:11,19:30:81.28:3071,81,0	1/1:11,16:27:69.23:2489,69,0	1/1:3,7:11:27.09:991,27,0	1/1:14,12:31:87.28:2896,87,0	1/1:6,27:33:96.33:3392,96,0	1/1:6,5:12:24.08:717,24,0	1/1:6,19:26:75.25:2452,75,0	1/1:3,19:23:60.20:2318,60,0	1/1:6,8:15:32.94:1064,33,0	1/1:4,13:20:48.16:1680,48,0	1/1:7,24:37:99:3925,111,0	1/1:4,24:28:87.30:3463,87,0	1/1:0,3:3:3.01:121,3,0
chr10	21631316	.	A	ATTT	15359.65	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-2.155;DP=546;FS=1.980;HRun=10;HaplotypeScore=78.1675;InbreedingCoeff=0.8777;MQ=66.79;MQ0=1;MQRankSum=-0.101;QD=32.27;ReadPosRankSum=0.107;VQSLOD=4.2727;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,33:43:90.24:1606,90,0	1/1:0,3:3:9.03:173,9,0	0/0:8,0:9:8.55:0,9,64	0/0:9,0:8:3.01:0,3,37	1/1:2,0:21:53.75:404,54,0	1/1:6,20:29:45.15:863,45,0	1/1:7,18:26:49.70:854,50,0	0/0:23,0:25:49.30:0,49,598	1/1:2,11:16:24.08:461,24,0	1/1:5,6:14:24.06:412,24,0	1/1:4,11:21:48.03:614,48,0	1/1:3,17:21:45.15:861,45,0	1/1:5,14:19:30.10:537,30,0	1/1:4,12:19:33.07:547,33,0	0/0:27,0:27:72.21:0,72,876	1/1:2,14:20:42.10:715,42,0	1/1:6,24:33:63.67:1158,64,0	1/1:5,13:19:38.05:620,38,0	1/1:9,12:24:54.12:880,54,0	1/1:3,15:19:47.96:712,48,0	1/1:5,8:16:16.75:258,17,0	1/1:0,1:17:43.13:383,43,0	1/1:5,7:13:14.75:269,15,0	1/1:1,23:26:54.16:999,54,0	1/1:2,10:15:30.04:472,30,0	1/1:3,12:19:45.06:696,45,0	1/1:5,10:18:45.12:788,45,0	1/1:1,1:3:6:81,6,0
chr10	21631439	.	C	CT	2096.89	PASS	AB=0.710;AC=34;AF=0.607;AN=56;BaseQRankSum=-3.331;DP=534;FS=1.096;HRun=15;HaplotypeScore=71.0267;InbreedingCoeff=0.2920;MQ=74.27;MQ0=1;MQRankSum=-0.982;QD=5.19;ReadPosRankSum=-2.357;VQSLOD=1.7679;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:6,17:24:2.51:102,0,3	0/0:7,0:8:7.79:0,8,42	0/0:18,0:16:13.39:0,13,65	0/0:17,0:14:2.67:0,3,22	1/1:19,6:26:24.07:279,24,0	0/1:9,10:21:16.04:112,0,16	1/1:3,10:14:8.83:62,9,0	0/0:22,3:26:5.72:0,6,143	1/1:6,7:13:6.72:41,7,0	1/1:17,6:24:48.42:350,48,0	0/1:5,11:17:21.88:75,0,22	1/1:19,0:19:19.02:113,19,0	1/1:3,13:16:2.98:22,3,0	1/1:7,17:23:9.88:77,10,0	0/1:16,10:28:5.78:6,0,89	0/0:19,0:19:0.38:0,0,102	0/0:27,1:29:3.49:0,3,211	1/1:5,3:8:7.24:53,7,0	0/0:11,0:10:4.95:0,5,25	0/1:22,1:24:13.17:13,0,143	0/1:15,3:18:4.79:5,0,87	0/1:10,9:19:0.06:81,0,0	1/1:4,6:10:9.88:78,10,0	0/1:7,10:17:0.14:97,0,0	1/1:7,12:20:4.74:137,5,0	1/1:14,10:25:11.76:189,12,0	1/1:13,9:23:38.71:277,39,0	1/1:10,3:13:13.65:94,14,0
chr10	21632364	.	A	AGAG	18357.16	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-8.907;DP=728;FS=16.396;HRun=0;HaplotypeScore=92.3859;InbreedingCoeff=0.9663;MQ=65.45;MQ0=30;MQRankSum=-0.834;QD=28.77;ReadPosRankSum=3.884;VQSLOD=3.7684;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,37:51:63.22:1284,63,0	1/1:3,7:10:18.06:346,18,0	0/0:25,0:19:21.05:0,21,371	0/0:33,0:20:22.90:0,23,431	1/1:8,17:24:51.07:850,51,0	1/1:3,31:35:69.24:1425,69,0	1/1:13,18:31:30.10:619,30,0	1/1:14,12:26:42.86:521,43,0	1/1:9,9:17:18.06:372,18,0	1/1:9,12:17:33.10:600,33,0	1/1:5,8:12:21.07:408,21,0	1/1:3,15:15:33.11:681,33,0	1/1:3,26:29:51.18:1050,51,0	1/1:7,18:22:33.11:681,33,0	0/0:32,0:32:81.26:0,81,1151	1/1:7,20:25:72.23:1408,72,0	1/1:11,17:24:27.09:557,27,0	1/1:9,17:24:34.14:856,34,0	1/1:9,11:20:34.62:591,35,0	1/1:5,13:20:42.10:779,42,0	1/1:11,21:30:36.12:743,36,0	1/1:14,7:17:41.93:680,42,0	1/1:4,10:14:17.96:326,18,0	1/1:13,22:31:33.03:623,33,0	1/1:4,20:24:48.16:991,48,0	1/1:8,21:26:63.11:1121,63,0	1/1:5,21:25:33.11:658,33,0	1/1:8,13:19:9.03:186,9,0
chr10	21632560	.	A	AC	24757.24	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-10.767;DP=804;FS=12.816;HRun=4;HaplotypeScore=74.2690;InbreedingCoeff=0.9984;MQ=80.17;MQ0=0;MQRankSum=-7.687;QD=34.58;ReadPosRankSum=4.316;VQSLOD=4.3751;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,47:49:99:1682,123,0	1/1:2,7:9:21.05:270,21,0	0/0:22,0:22:60.08:0,60,649	0/0:25,0:25:63.14:0,63,701	1/1:1,24:25:63.17:840,63,0	1/1:3,31:34:84.28:1144,84,0	1/1:4,42:46:99:1682,123,0	1/1:4,29:33:87.17:1119,87,0	1/1:2,28:30:84.28:1137,84,0	1/1:3,23:26:72.20:937,72,0	1/1:2,18:20:48.16:653,48,0	1/1:2,31:33:84.28:1149,84,0	1/1:1,40:41:99:1435,105,0	1/1:2,27:29:75.25:1026,75,0	0/0:41,0:41:99:0,111,1259	1/1:3,28:31:75.25:1026,75,0	1/1:0,26:26:72.24:977,72,0	1/1:0,11:11:30.10:409,30,0	1/1:2,21:23:63.19:841,63,0	1/1:3,29:32:78.26:1066,78,0	1/1:3,41:44:99:1395,102,0	1/1:2,23:25:54.18:738,54,0	1/1:1,28:29:71.53:984,72,0	1/1:4,26:30:75.25:1026,75,0	1/1:1,21:22:57.19:780,57,0	1/1:1,24:25:72.22:966,72,0	1/1:0,21:21:51.17:697,51,0	1/1:0,22:22:57.19:779,57,0
chr10	21633070	.	T	TA	11341.53	PASS	AB=0.583;AC=49;AF=0.875;AN=56;BaseQRankSum=-5.941;DP=611;FS=0.651;HRun=11;HaplotypeScore=66.3946;InbreedingCoeff=0.6923;MQ=73.16;MQ0=0;MQRankSum=-2.292;QD=20.29;ReadPosRankSum=-0.525;VQSLOD=5.5330;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,42:46:95.98:957,96,0	0/1:2,5:7:5.20:134,0,5	0/0:13,0:11:8.79:0,9,59	0/0:10,0:10:0.25:0,0,62	1/1:5,23:29:57.18:506,57,0	1/1:5,21:26:39.89:586,40,0	1/1:5,12:17:12.65:306,13,0	1/1:10,19:30:16.42:473,16,0	1/1:2,12:15:29.89:288,30,0	1/1:3,24:27:69.11:692,69,0	1/1:2,10:12:27.01:263,27,0	1/1:3,27:30:75.15:761,75,0	1/1:6,21:27:54.10:546,54,0	1/1:6,17:23:36.07:365,36,0	0/0:28,0:28:59.70:0,60,462	1/1:6,13:19:50.94:501,51,0	1/1:3,24:27:57.11:579,57,0	1/1:0,17:17:51.10:517,51,0	1/1:5,13:18:23.46:300,23,0	1/1:6,17:23:48.06:477,48,0	1/1:0,10:11:29.89:288,30,0	1/1:1,16:17:36.06:361,36,0	1/1:5,13:19:36.03:355,36,0	1/1:9,19:28:44.92:440,45,0	1/1:7,24:33:43.80:582,44,0	1/1:11,16:28:31.16:472,31,0	1/1:3,25:27:57.07:561,57,0	1/1:0,1:1:3.01:30,3,0
chr10	21636181	.	T	TA	1663.81	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=9.436;DP=611;FS=7.453;HRun=0;HaplotypeScore=67.8293;InbreedingCoeff=0.9330;MQ=71.70;MQ0=0;MQRankSum=1.095;QD=21.33;ReadPosRankSum=2.342;VQSLOD=5.1920;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:87.28:0,87,1190	0/0:11,0:11:32.04:0,32,202	0/0:13,0:11:0.90:0,1,92	0/0:10,0:9:17.71:0,18,176	0/0:33,0:33:99:0,99,1351	0/0:17,0:17:45.12:0,45,579	0/0:24,0:24:72.20:0,72,936	0/0:30,0:30:90.25:0,90,1156	0/0:34,0:34:99:0,102,1393	0/0:27,0:27:81.25:0,81,1084	0/0:28,0:28:84.25:0,84,1119	0/0:24,0:24:69.22:0,69,948	0/0:15,0:15:45.14:0,45,609	0/0:16,0:16:48.15:0,48,653	0/0:27,0:27:78.25:0,78,1073	0/0:25,0:25:45.56:0,46,322	1/1:3,24:27:53.65:625,54,0	0/0:23,0:23:69.18:0,69,907	1/1:4,13:17:38.01:373,38,0	1/1:3,23:27:38.94:594,39,0	1/1:0,7:7:21.06:230,21,0	0/0:27,0:27:78.25:0,78,1058	0/0:20,0:20:57.16:0,57,735	0/0:17,0:17:51.15:0,51,677	0/0:31,0:31:90.29:0,90,1230	0/0:21,0:21:60.19:0,60,808	0/0:22,0:22:66.22:0,66,919	0/0:7,0:7:21.04:0,21,257
chr10	21636887	.	GATTTTTTTATTT	G	5624.98	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=10.845;DP=433;FS=0.549;HRun=0;HaplotypeScore=146.0658;InbreedingCoeff=0.9427;MQ=59.62;MQ0=0;MQRankSum=-9.594;QD=93.75;ReadPosRankSum=2.722;VQSLOD=4.8471;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:69.24:0,69,3981	1/1:0,5:4:12.04:470,12,0	0/0:8,0:6:15.05:0,15,635	0/0:6,0:5:12.04:0,12,541	0/0:23,0:23:66.23:0,66,3740	0/0:13,0:13:39.13:0,39,2359	0/0:12,0:12:33.11:0,33,1839	0/0:23,0:23:69.22:0,69,3543	0/0:12,0:12:36.12:0,36,2224	0/0:28,0:28:84.29:0,84,4911	0/0:15,0:15:42.14:0,42,2552	0/0:13,0:13:39.13:0,39,2284	0/0:21,0:21:63.22:0,63,3566	0/0:12,0:12:36.12:0,36,2197	0/0:11,0:11:30.10:0,30,1910	1/1:0,14:14:30.10:1187,30,0	1/1:0,10:10:21.07:830,21,0	0/0:30,0:29:87.30:0,87,5120	1/1:0,7:7:21.07:682,21,0	1/1:0,23:23:66.18:2407,66,0	1/1:1,0:1:3.01:49,3,0	0/0:6,0:6:18.06:0,18,1139	0/0:16,0:16:48.16:0,48,2808	0/0:6,0:6:18.06:0,18,1116	0/0:27,0:27:81.27:0,81,4488	0/0:17,0:17:51.18:0,51,3097	0/0:35,0:35:99:0,105,6690	0/0:16,0:16:48.16:0,48,2532
chr10	21638195	.	T	TACACACAC	6950.27	PASS	AB=0.806;AC=33;AF=0.688;AN=48;BaseQRankSum=1.511;DP=692;FS=1.875;HRun=0;HaplotypeScore=198.8223;InbreedingCoeff=0.6913;MQ=55.39;MQ0=17;MQRankSum=-8.654;QD=16.09;ReadPosRankSum=-3.850;VQSLOD=3.7114;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:41,0:39:12.47:187,12,0	./.	./.	./.	1/1:21,0:21:2.43:24,2,0	0/1:19,4:25:0:0,0,0	1/1:29,0:36:18.12:559,18,0	1/1:41,0:37:48.17:1010,48,0	1/1:11,5:17:9.03:368,9,0	1/1:14,5:21:33.10:906,33,0	1/1:16,3:19:2.87:122,3,0	1/1:19,7:28:8.09:367,8,0	1/1:20,3:29:24.55:792,25,0	1/1:15,5:26:3.01:121,3,0	0/0:24,0:24:54.16:0,54,1249	0/0:25,0:30:57.18:0,57,1301	0/0:30,0:33:60.17:0,60,1299	1/1:14,5:21:30.09:983,30,0	0/0:13,0:13:9.03:0,9,206	0/0:14,0:15:18.05:0,18,382	0/0:59,0:62:17.85:0,18,1650	1/1:20,0:20:8.86:281,9,0	1/1:9,3:14:1.74:22,2,0	1/1:17,4:28:2.74:119,3,0	0/0:20,2:25:0.44:0,0,2	1/1:26,0:26:32.54:978,33,0	1/1:18,0:18:3.99:110,4,0	./.
chr10	21639873	.	AC	A	6602.36	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=18.910;DP=788;FS=0.000;HRun=1;HaplotypeScore=89.3249;InbreedingCoeff=0.9991;MQ=82.35;MQ0=0;MQRankSum=-1.699;QD=34.39;ReadPosRankSum=2.769;VQSLOD=4.6947;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,126,2011	1/1:0,10:10:24.04:293,24,0	0/0:23,0:23:55.44:0,55,932	0/0:21,0:21:57.18:0,57,846	0/0:32,0:32:96.31:0,96,1503	0/0:34,0:34:99:0,99,1535	0/0:26,0:26:78.23:0,78,1188	0/0:37,0:37:99:0,111,1770	0/0:25,0:25:75.26:0,75,1196	0/0:30,0:30:90.31:0,90,1437	0/0:25,0:25:75.26:0,75,1195	0/0:25,0:25:75.26:0,75,1189	0/0:30,0:30:87.30:0,87,1388	0/0:22,0:22:66.22:0,66,1049	0/0:37,0:37:99:0,111,1737	1/1:2,43:45:66.70:1389,67,0	1/1:0,36:36:93.30:1206,93,0	0/0:12,0:12:36.12:0,36,575	1/1:0,19:19:57.12:676,57,0	1/1:0,33:33:99:1284,99,0	1/1:6,43:49:99:1754,141,0	0/0:22,0:22:66.20:0,66,1008	0/0:25,0:25:75.23:0,75,1168	0/0:34,0:34:99:0,102,1593	0/0:28,0:28:84.26:0,84,1314	0/0:29,0:29:84.29:0,84,1339	0/0:29,0:29:87.24:0,87,1315	0/0:8,0:8:24.08:0,24,382
chr10	21640348	.	C	CCAGAAACGTCTTTCAAT	100865.76	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-6.768;DP=903;FS=13.251;HRun=0;HaplotypeScore=285.8289;InbreedingCoeff=0.9781;MQ=74.32;MQ0=0;MQRankSum=-14.954;QD=127.84;ReadPosRankSum=2.293;VQSLOD=3.3464;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:16,21:50:94.20:6323,94,0	1/1:5,5:17:24.08:1604,24,0	0/0:31,0:31:75.19:0,75,2477	0/0:35,0:35:62.41:0,62,2467	1/1:11,13:35:66.19:4011,66,0	1/1:7,14:29:60.21:4724,60,0	1/1:11,6:35:48.16:2918,48,0	1/1:36,0:36:96.30:5032,96,0	1/1:8,9:36:48.16:3465,48,0	1/1:9,11:32:81.28:5696,81,0	1/1:11,9:30:60.07:3548,60,0	1/1:15,13:41:81.28:5068,81,0	1/1:12,7:33:51.17:3237,51,0	1/1:10,14:32:69.24:4636,69,0	0/0:48,0:48:99:0,138,5940	1/1:16,10:38:69.24:4364,69,0	1/1:9,7:21:45.15:3315,45,0	1/1:8,1:9:24.08:1635,24,0	1/1:10,11:34:93.32:5998,93,0	1/1:16,24:53:99:7484,117,0	1/1:16,0:16:36.04:1289,36,0	1/1:10,15:38:75.17:4606,75,0	1/1:10,12:37:53.71:3886,54,0	1/1:14,5:26:51.18:3195,51,0	1/1:8,10:31:54.18:3273,54,0	1/1:12,14:44:99:7516,126,0	1/1:8,8:31:44.95:3297,45,0	1/1:1,3:5:9.03:745,9,0
chr10	21641625	.	AATCCTTC	A	2514.58	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.765;DP=676;FS=5.267;HRun=0;HaplotypeScore=166.5114;InbreedingCoeff=0.9992;MQ=80.17;MQ0=0;MQRankSum=-7.307;QD=69.85;ReadPosRankSum=-3.285;VQSLOD=3.0308;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,108,4047	0/0:17,0:17:51.18:0,51,2089	0/0:27,0:27:75.26:0,75,2729	0/0:22,0:22:63.13:0,63,2205	0/0:31,0:31:90.30:0,90,3351	0/0:31,0:31:93.32:0,93,3690	0/0:24,0:24:72.21:0,72,2645	1/1:0,36:36:99:2609,105,0	0/0:22,0:22:66.23:0,66,2549	0/0:21,0:21:63.18:0,63,2260	0/0:16,0:16:48.16:0,48,1966	0/0:28,0:28:84.27:0,84,3140	0/0:35,0:35:99:0,105,4184	0/0:27,0:27:81.28:0,81,3188	0/0:33,0:33:96.33:0,96,3794	0/0:22,0:22:66.23:0,66,2576	0/0:21,0:21:63.22:0,63,2552	0/0:11,0:11:33.11:0,33,1299	0/0:29,0:29:81.27:0,81,2899	0/0:31,0:31:90.28:0,90,3437	0/0:25,0:25:75.26:0,75,2941	0/0:20,0:20:60.21:0,60,2297	0/0:16,0:16:45.14:0,45,1696	0/0:17,0:17:51.18:0,51,2037	0/0:19,0:19:57.18:0,57,2113	0/0:22,0:22:66.23:0,66,2633	0/0:26,0:26:78.27:0,78,3061	0/0:10,0:10:30.10:0,30,1201
chr10	21642236	.	AC	A	10090.50	PASS	AB=0.914;AC=42;AF=0.750;AN=56;BaseQRankSum=-6.610;DP=576;FS=5.437;HRun=9;HaplotypeScore=96.1596;InbreedingCoeff=0.8305;MQ=75.21;MQ0=0;MQRankSum=-2.089;QD=20.93;ReadPosRankSum=5.812;VQSLOD=4.8642;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,19:22:57.02:521,57,0	0/0:4,0:11:25.82:0,26,141	0/1:12,2:14:26.06:26,0,188	0/0:8,0:8:6.48:0,6,57	1/1:4,24:29:79.99:704,80,0	1/1:3,24:27:43.42:650,43,0	1/1:1,11:12:27.01:247,27,0	1/1:6,23:29:69.02:626,69,0	1/1:3,24:27:65.83:604,66,0	1/1:11,18:29:72.03:657,72,0	1/1:2,18:20:51.02:467,51,0	1/1:2,12:14:33.01:302,33,0	1/1:2,22:24:57.02:521,57,0	1/1:4,17:21:53.94:483,54,0	1/1:3,20:23:65.96:593,66,0	0/1:6,1:20:1.44:1,0,115	0/0:5,0:23:17.21:0,17,107	1/1:1,16:17:51.03:465,51,0	0/0:4,0:13:31.68:0,32,199	0/0:9,0:21:28.64:0,29,166	0/0:6,0:18:29.08:0,29,225	1/1:6,17:23:54.01:494,54,0	1/1:3,17:20:48.03:438,48,0	1/1:4,15:19:45.02:411,45,0	1/1:3,25:28:60.02:549,60,0	1/1:8,17:26:56.06:500,56,0	1/1:5,24:29:55.18:639,55,0	1/1:1,8:9:21.01:192,21,0
chr10	21642468	.	T	TA	28643.54	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-10.586;DP=786;FS=10.409;HRun=2;HaplotypeScore=66.7820;InbreedingCoeff=0.9678;MQ=90.00;MQ0=0;MQRankSum=-12.338;QD=39.35;ReadPosRankSum=6.801;VQSLOD=4.0489;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,34:34:96.32:1382,96,0	1/1:0,7:7:21.07:302,21,0	0/0:28,0:28:84.25:0,84,1025	0/0:30,0:30:80.71:0,81,959	1/1:1,28:29:81.74:1167,82,0	1/1:0,25:25:72.24:1037,72,0	1/1:1,27:28:78.26:1123,78,0	1/1:2,35:37:99:1473,105,0	1/1:1,28:29:78.26:1123,78,0	1/1:1,34:35:96.32:1381,96,0	1/1:0,26:26:72.24:1037,72,0	1/1:1,31:32:90.30:1296,90,0	1/1:3,30:33:90.30:1296,90,0	1/1:0,30:30:87.29:1252,87,0	1/1:0,37:37:99:1469,102,0	1/1:3,37:40:99:1426,99,0	1/1:1,30:31:87.29:1253,87,0	1/1:0,8:8:24.08:342,24,0	1/1:1,28:28:87.24:1211,87,0	1/1:2,30:32:87.25:1229,87,0	1/1:5,36:41:99:1451,102,0	1/1:3,23:26:69.19:970,69,0	1/1:0,19:19:44.55:647,45,0	1/1:1,26:27:72.24:1037,72,0	1/1:0,22:22:63.21:907,63,0	1/1:0,32:32:96.30:1361,96,0	1/1:2,33:35:93.31:1339,93,0	1/1:1,3:4:9.03:130,9,0
chr10	21643535	.	GA	G	9536.62	PASS	AB=0.928;AC=40;AF=0.714;AN=56;BaseQRankSum=5.608;DP=644;FS=12.386;HRun=10;HaplotypeScore=81.6014;InbreedingCoeff=0.8048;MQ=80.15;MQ0=1;MQRankSum=-3.063;QD=18.92;ReadPosRankSum=3.114;VQSLOD=4.8801;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,33:40:76.40:811,76,0	0/0:12,0:12:30.06:0,30,316	0/0:20,1:21:10.03:0,10,289	0/1:23,1:22:25.94:26,0,264	1/1:4,20:25:67.96:568,68,0	1/1:2,26:27:68.98:599,69,0	1/1:4,18:22:47.98:417,48,0	1/1:4,25:30:76.98:649,77,0	1/1:5,12:17:38.95:335,39,0	1/1:6,18:26:63.13:527,63,0	1/1:1,20:21:56.98:494,57,0	1/1:5,24:29:71.98:625,72,0	1/1:8,25:33:68.91:591,69,0	1/1:3,22:25:56.96:495,57,0	0/0:26,0:26:66.16:0,66,715	0/1:23,3:26:16.75:17,0,506	0/0:20,1:20:34.10:0,34,595	1/1:2,12:14:29.98:260,30,0	0/0:22,0:25:53.47:0,53,525	0/0:29,1:30:52.13:0,52,781	0/0:4,0:5:8.07:0,8,119	1/1:4,19:23:56.97:491,57,0	1/1:4,18:22:56.99:494,57,0	1/1:3,16:19:47.98:416,48,0	1/1:4,9:13:20.96:180,21,0	1/1:1,23:24:68.99:599,69,0	1/1:4,28:33:83.01:709,83,0	1/1:0,10:10:26.99:234,27,0
chr10	21643610	.	G	GA	9943.88	PASS	AB=0.600;AC=51;AF=0.911;AN=56;BaseQRankSum=-4.848;DP=598;FS=18.061;HRun=10;HaplotypeScore=87.4783;InbreedingCoeff=0.5648;MQ=72.63;MQ0=0;MQRankSum=-3.102;QD=17.26;ReadPosRankSum=-0.322;VQSLOD=3.7432;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:23:37.76:212,38,0	1/1:2,1:13:27.05:150,27,0	0/0:15,0:15:13.45:0,13,168	0/0:5,0:7:2.60:0,3,62	1/1:3,0:26:52.31:269,52,0	1/1:10,20:31:46.63:705,47,0	1/1:9,14:23:51.11:536,51,0	1/1:16,28:46:38.93:864,39,0	1/1:3,12:15:33.07:345,33,0	1/1:9,22:31:44.47:659,44,0	1/1:6,13:19:45.11:479,45,0	1/1:5,10:16:4.59:289,5,0	1/1:7,21:28:67.41:706,67,0	1/1:7,10:17:17.45:384,17,0	1/1:4,13:17:8.44:295,8,0	1/1:3,1:24:39.89:203,40,0	1/1:3,1:16:3.13:130,3,0	1/1:7,12:21:47.24:451,47,0	1/1:2,2:18:43.63:259,44,0	1/1:4,2:20:41.67:232,42,0	1/1:2,1:12:17.04:86,17,0	1/1:3,3:16:43.59:296,44,0	1/1:4,23:28:59.30:660,59,0	0/1:5,11:18:8.19:351,0,8	1/1:8,26:36:56.06:750,56,0	1/1:14,0:29:59.49:322,59,0	1/1:13,0:27:47.51:254,48,0	1/1:1,0:4:11.36:57,11,0
chr10	21644401	.	AACACACACACACACACACACACAC	A	11669.30	PASS	AB=0.609;AC=21;AF=0.389;AN=54;BaseQRankSum=11.708;DP=631;FS=3.914;HRun=0;HaplotypeScore=322.8026;InbreedingCoeff=0.8796;MQ=62.03;MQ0=22;MQRankSum=-9.255;QD=49.66;ReadPosRankSum=1.612;VQSLOD=3.2000;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:34:42.07:0,42,2233	0/0:10,0:15:23.29:0,23,1711	0/0:31,0:25:4.39:0,4,857	0/0:38,0:31:23.42:0,23,604	0/0:13,0:20:36.12:0,36,2300	1/1:4,14:17:21.07:1155,21,0	./.	0/0:30,0:29:48.16:0,48,1563	1/1:5,17:20:21.07:1154,21,0	1/1:10,13:20:25:678,25,0	1/1:5,9:13:12.04:530,12,0	1/1:5,18:22:39.03:2238,39,0	1/1:7,15:21:15.05:849,15,0	1/1:10,19:29:36.12:2061,36,0	0/0:18,0:21:39.13:0,39,3649	0/0:14,0:21:37.20:0,37,2524	0/0:33,0:35:78.27:0,78,5107	1/1:8,1:9:8.99:214,9,0	0/0:14,0:13:24.07:0,24,1230	0/0:11,0:16:18.22:0,18,845	0/0:13,0:24:24.08:0,24,1517	0/0:10,0:17:24.08:0,24,1642	1/1:5,13:18:20.97:762,21,0	0/1:10,17:26:99:387,0,263	1/1:8,17:27:34.80:1642,35,0	0/0:21,0:20:48.16:0,48,2992	0/0:13,0:21:34.60:0,35,2181	0/0:7,0:9:18.06:0,18,819
chr10	21645105	.	TAA	T	6032.02	PASS	AB=0.512;AC=29;AF=0.518;AN=56;BaseQRankSum=-3.405;DP=497;FS=0.361;HRun=12;HaplotypeScore=71.8786;InbreedingCoeff=0.9229;MQ=60.89;MQ0=2;MQRankSum=-0.943;QD=21.02;ReadPosRankSum=4.045;VQSLOD=4.4118;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:3,0:21:45.11:0,45,190	0/0:7,0:7:18.06:0,18,268	0/0:9,0:8:20.34:0,20,200	0/0:9,0:9:12.04:0,12,163	0/1:1,2:22:9.75:10,0,117	1/1:2,26:28:60.12:609,60,0	1/1:1,8:9:24.03:244,24,0	1/1:11,22:33:66.05:656,66,0	1/1:0,13:14:32.81:317,33,0	1/1:4,17:21:47.97:465,48,0	1/1:4,21:25:63.12:641,63,0	1/1:4,10:13:24.04:244,24,0	1/1:3,17:20:52.63:517,53,0	1/1:4,13:17:36.02:366,36,0	1/1:3,16:19:51.10:512,51,0	0/0:14,1:15:14.62:0,15,576	0/0:14,0:14:36.07:0,36,476	1/1:3,11:14:30.04:305,30,0	0/0:22,0:26:64.63:0,65,773	0/0:19,0:20:53.63:0,54,711	0/0:7,0:7:15.05:0,15,223	0/0:3,0:11:19.96:0,20,71	1/1:0,24:24:59.91:610,60,0	1/1:2,10:12:26.97:261,27,0	1/1:3,12:14:27.05:275,27,0	0/0:3,0:21:45.60:0,46,176	0/0:6,1:39:61.95:0,62,360	0/0:2,0:11:25.92:0,26,113
chr10	21645667	.	TA	T	11466.65	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-0.618;DP=506;FS=25.264;HRun=8;HaplotypeScore=55.7935;InbreedingCoeff=0.9375;MQ=71.79;MQ0=0;MQRankSum=-5.618;QD=24.14;ReadPosRankSum=4.828;VQSLOD=3.3271;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,18:19:45.07:434,45,0	1/1:0,8:8:24.04:232,24,0	0/0:23,0:20:39.92:0,40,413	0/0:8,0:8:6.19:0,6,169	1/1:4,29:34:89.10:832,89,0	1/1:1,16:17:38.68:376,39,0	1/1:1,11:12:33.05:319,33,0	1/1:5,26:31:78.04:726,78,0	1/1:2,14:16:30.05:289,30,0	1/1:1,24:25:69.10:661,69,0	1/1:2,23:25:66.05:626,66,0	1/1:0,14:14:33.05:319,33,0	1/1:0,25:25:66.11:638,66,0	1/1:0,13:13:33.05:319,33,0	1/1:1,18:19:48.08:464,48,0	1/1:1,21:22:54.09:522,54,0	1/1:1,11:12:33.05:319,33,0	1/1:1,12:13:27.04:261,27,0	1/1:6,13:19:41.75:375,42,0	1/1:2,20:22:57.02:536,57,0	1/1:0,8:8:24.04:232,24,0	1/1:0,7:7:21.03:203,21,0	1/1:2,18:20:45.04:435,45,0	1/1:1,8:9:21.03:203,21,0	1/1:1,16:17:45.07:435,45,0	1/1:1,20:21:60.07:568,60,0	1/1:2,33:35:87.05:828,87,0	1/1:1,11:12:33.05:319,33,0
chr10	21645946	.	TA	T	12745.57	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=4.864;DP=528;FS=4.551;HRun=4;HaplotypeScore=56.0433;InbreedingCoeff=0.9650;MQ=71.63;MQ0=0;MQRankSum=-1.396;QD=32.43;ReadPosRankSum=2.392;VQSLOD=5.4634;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:30.06:0,30,398	1/1:0,5:5:12.04:144,12,0	0/0:14,0:13:33.11:0,33,447	0/0:8,0:8:21.07:0,21,292	0/0:27,0:27:78.25:0,78,1064	1/1:1,23:24:66.20:792,66,0	1/1:0,12:12:36.11:432,36,0	1/1:4,34:38:99:1212,102,0	1/1:0,25:25:66.20:792,66,0	1/1:0,30:30:90.28:1080,90,0	1/1:1,14:15:42.13:501,42,0	1/1:1,26:27:75.23:900,75,0	1/1:2,23:25:63.19:748,63,0	1/1:0,21:21:57.17:684,57,0	1/1:1,12:13:36.11:432,36,0	1/1:3,20:23:60.18:720,60,0	1/1:1,15:16:42.13:504,42,0	1/1:2,9:11:24.07:288,24,0	1/1:0,14:14:42.13:504,42,0	1/1:0,29:29:81.25:972,81,0	1/1:0,8:8:24.07:288,24,0	0/0:14,0:14:42.13:0,42,569	1/1:0,13:13:30.09:360,30,0	1/1:1,15:16:3.12:457,3,0	1/1:0,28:28:78.24:936,78,0	0/0:24,0:24:69.22:0,69,949	0/0:23,0:23:60.19:0,60,824	0/0:14,0:14:42.13:0,42,571
chr10	21646523	.	GA	G	8357.11	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=14.937;DP=681;FS=5.911;HRun=8;HaplotypeScore=68.0238;InbreedingCoeff=0.9949;MQ=76.06;MQ0=0;MQRankSum=-0.928;QD=25.40;ReadPosRankSum=0.608;VQSLOD=5.6815;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:63.19:0,63,751	0/0:7,0:7:21.06:0,21,254	0/0:18,0:18:51.08:0,51,565	0/0:10,0:10:20.79:0,21,252	0/0:29,0:29:81.25:0,81,977	1/1:1,34:35:96.15:925,96,0	1/1:3,14:17:42.06:405,42,0	1/1:2,24:26:72.07:682,72,0	1/1:0,20:20:54.09:522,54,0	1/1:3,30:33:87.13:840,87,0	1/1:2,21:23:57.09:550,57,0	1/1:1,19:20:48.08:464,48,0	1/1:5,31:36:93.14:898,93,0	1/1:0,23:23:66.11:637,66,0	0/0:33,0:33:93.28:0,93,1114	0/0:22,0:22:51.16:0,51,616	0/0:24,0:24:63.19:0,63,761	1/1:1,17:18:48.08:463,48,0	0/0:13,0:13:30.09:0,30,362	0/0:34,0:34:93.27:0,93,1103	0/0:25,0:25:69.21:0,69,834	0/0:34,0:34:99:0,99,1196	1/1:2,29:31:71.71:695,72,0	1/1:0,21:21:63.10:608,63,0	1/1:1,25:26:69.11:666,69,0	0/0:33,3:36:12.47:0,12,1000	0/0:24,0:24:66.20:0,66,797	0/0:20,0:20:60.18:0,60,724
chr10	21647326	.	AG	A	22177.08	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=0.367;DP=642;FS=0.735;HRun=1;HaplotypeScore=110.6132;InbreedingCoeff=0.9912;MQ=77.33;MQ0=0;MQRankSum=-8.788;QD=36.18;ReadPosRankSum=4.607;VQSLOD=4.6507;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,38:38:99:1363,105,0	1/1:0,12:12:33.11:428,33,0	0/0:15,0:15:39.13:0,39,613	0/0:14,0:14:42.14:0,42,674	1/1:1,25:26:69.22:896,69,0	1/1:4,24:28:78.17:963,78,0	1/1:0,31:31:81.26:1051,81,0	1/1:3,24:26:72.23:922,72,0	1/1:0,25:25:72.23:935,72,0	1/1:2,17:19:45.15:581,45,0	1/1:0,10:10:27.09:350,27,0	1/1:0,17:17:48.16:623,48,0	1/1:0,16:16:45.15:583,45,0	1/1:0,26:26:78.25:1012,78,0	1/1:2,35:37:99:1347,105,0	1/1:0,22:22:66.21:857,66,0	1/1:0,26:26:75.24:974,75,0	1/1:2,22:24:69.20:879,69,0	1/1:0,20:20:57.17:725,57,0	1/1:0,25:25:72.23:934,72,0	1/1:3,43:46:99:1695,132,0	1/1:0,17:17:51.17:659,51,0	1/1:0,16:16:45.15:584,45,0	1/1:0,28:28:75.24:973,75,0	1/1:0,22:22:63.20:818,63,0	1/1:1,16:17:48.16:623,48,0	1/1:0,31:31:93.30:1207,93,0	1/1:0,7:7:15.05:195,15,0
chr10	21648113	.	AAGAT	A	1876.88	PASS	AB=0.978;AC=39;AF=0.813;AN=48;BaseQRankSum=-1.380;DP=163;FS=12.717;HRun=0;HaplotypeScore=33.5304;InbreedingCoeff=0.0765;MQ=88.90;MQ0=1;MQRankSum=-1.877;QD=15.77;ReadPosRankSum=1.738;VQSLOD=0.9641;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:4:5.99:50,6,0	./.	0/0:12,0:5:3.10:0,3,44	0/0:25,0:12:17.35:0,17,105	1/1:7,0:7:14.98:123,15,0	1/1:3,0:3:3:25,3,0	0/1:2,0:2:17.83:18,0,18	0/1:16,0:16:24.24:210,0,24	1/1:3,0:3:5.99:49,6,0	1/1:5,0:5:6.01:58,6,0	1/1:6,0:6:11.99:100,12,0	1/1:3,0:3:3:25,3,0	1/1:3,0:3:3:25,3,0	1/1:5,0:5:11.99:101,12,0	1/1:14,0:14:30.02:324,30,0	1/1:2,0:2:3.01:53,3,0	0/1:7,0:7:32.71:155,0,33	1/1:6,0:6:8.81:55,9,0	1/1:6,0:6:6:75,6,0	1/1:2,0:2:3.01:43,3,0	0/1:5,0:5:4.80:40,0,5	./.	./.	1/1:3,0:3:8.98:72,9,0	./.	1/1:0,4:4:11.61:145,12,0	1/1:5,0:5:14.97:122,15,0	0/1:7,1:8:30.29:146,0,30
chr10	21648115	.	GATAGATATATATATATATAT	G	2292.47	PASS	AB=0.990;AC=25;AF=0.543;AN=46;BaseQRankSum=-4.528;DP=160;FS=21.622;HRun=0;HaplotypeScore=77.0149;InbreedingCoeff=-0.0672;MQ=85.82;MQ0=1;MQRankSum=-0.097;QD=21.63;ReadPosRankSum=-1.377;VQSLOD=-0.5327;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:4:5.99:50,6,0	./.	0/0:12,0:5:6.61:0,7,215	0/0:27,0:11:21.03:0,21,352	0/1:6,0:6:58.77:84,0,59	0/1:3,0:3:0:0,0,0	0/1:2,0:2:17.95:18,0,211	0/1:17,0:17:99:153,0,863	1/1:3,0:3:5.99:49,6,0	1/1:4,0:4:6.01:58,6,0	1/1:6,0:6:11.99:100,12,0	./.	0/0:2,0:2:0:0,0,0	0/1:5,0:5:42.64:43,0,64	1/1:1,13:14:30.10:1626,30,0	0/0:2,0:2:3.01:0,3,140	0/1:8,0:8:5.91:6,0,983	0/1:6,0:6:23.94:24,0,269	0/1:3,0:3:16.96:17,0,172	0/0:2,0:2:3.01:0,3,97	0/1:5,0:5:16.10:16,0,75	./.	./.	1/1:3,0:3:6.46:49,6,0	./.	0/1:4,0:4:12.92:13,0,450	1/1:5,0:5:11.95:98,12,0	0/1:7,0:8:31.86:32,0,628
chr10	21648117	.	TAG	T	1616.06	PASS	AB=0.932;AC=40;AF=0.833;AN=48;BaseQRankSum=-1.534;DP=148;FS=6.987;HRun=0;HaplotypeScore=31.5287;InbreedingCoeff=0.1458;MQ=86.60;MQ0=3;MQRankSum=-0.377;QD=15.69;ReadPosRankSum=1.715;VQSLOD=2.1785;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:4:5.99:50,6,0	./.	0/0:13,0:5:0.44:0,0,40	0/0:31,0:12:21.66:0,22,155	1/1:6,0:6:14.98:123,15,0	1/1:2,0:2:3:25,3,0	1/1:2,0:2:2.99:24,3,0	1/1:14,0:14:14.49:251,14,0	1/1:3,0:3:5.99:49,6,0	1/1:2,0:2:6.01:58,6,0	1/1:4,0:4:11.99:100,12,0	1/1:2,0:2:3:25,3,0	1/1:1,0:1:3:25,3,0	1/1:6,0:6:11.99:101,12,0	1/1:13,0:13:29.52:186,30,0	1/1:0,1:1:3:27,3,0	0/1:5,3:8:6.06:101,0,6	1/1:6,0:6:10.30:72,10,0	1/1:1,1:2:6:58,6,0	1/1:1,1:2:3:29,3,0	0/1:3,0:3:4.80:40,0,5	./.	./.	1/1:3,0:3:8.98:72,9,0	./.	0/1:5,0:5:5.13:61,0,5	1/1:5,0:5:14.97:122,15,0	0/1:9,0:9:1.13:138,0,1
chr10	21648146	.	ATT	A	220.57	PASS	AB=0.864;AC=8;AF=0.167;AN=48;BaseQRankSum=2.057;DP=130;FS=0.000;HRun=3;HaplotypeScore=31.6990;InbreedingCoeff=0.4117;MQ=66.61;MQ0=4;MQRankSum=1.151;QD=9.19;ReadPosRankSum=1.220;VQSLOD=0.2493;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:4:11.96:0,12,97	./.	0/0:12,0:4:6.35:0,6,57	0/0:22,0:4:2.13:0,2,35	0/0:4,0:4:9.01:0,9,102	0/0:3,0:3:9:0,9,81	0/0:3,0:3:5.89:0,6,54	0/1:7,0:7:8.81:9,0,130	0/0:1,0:1:3:0,3,27	0/0:4,0:4:12.02:0,12,116	0/0:1,0:1:3:0,3,28	./.	0/0:2,0:2:6.01:0,6,55	0/0:1,0:1:3:0,3,28	0/0:15,0:15:20.39:0,20,85	1/1:2,1:3:8.99:76,9,0	0/1:5,2:8:4.17:105,0,4	0/0:3,0:3:5.96:0,6,44	1/1:0,4:4:11.96:105,12,0	1/1:2,0:2:6:54,6,0	./.	0/0:2,0:2:6.01:0,6,56	0/0:5,0:5:15.01:0,15,135	0/0:3,0:3:9:0,9,80	./.	0/0:8,0:8:23.01:0,23,191	0/0:5,0:5:15:0,15,133	0/0:8,0:8:19.54:0,20,151
chr10	21649621	.	T	TGG	4959.04	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=2.927;DP=527;FS=0.439;HRun=1;HaplotypeScore=101.5572;InbreedingCoeff=0.9014;MQ=60.36;MQ0=59;MQRankSum=0.031;QD=14.50;ReadPosRankSum=3.803;VQSLOD=1.9917;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:25,1:25:35.30:380,35,0	1/1:5,0:4:8.96:70,9,0	0/0:44,0:13:28.63:0,29,265	0/0:56,0:27:49.38:0,49,550	1/1:18,0:16:17.96:151,18,0	1/1:12,1:12:30.15:239,30,0	1/1:16,0:14:27:238,27,0	0/0:19,0:18:53.63:0,54,446	1/1:12,2:12:32.51:255,33,0	1/1:14,0:14:41.82:366,42,0	1/1:19,0:18:5.85:238,6,0	1/1:19,1:18:39.09:387,39,0	1/1:15,0:13:37.92:316,38,0	1/1:10,4:14:32.92:276,33,0	0/0:13,0:12:26.82:0,27,207	1/1:11,0:8:6.77:134,7,0	1/1:30,0:26:28.97:403,29,0	1/1:10,0:8:11.57:117,12,0	1/1:13,0:10:2.82:115,3,0	1/1:9,0:9:17.51:137,18,0	1/1:24,1:20:26.62:212,27,0	1/1:16,0:15:20.96:179,21,0	1/1:15,0:12:20.51:167,21,0	1/1:20,2:23:35.38:294,35,0	1/1:16,0:14:35.71:286,36,0	0/0:28,0:25:60.38:0,60,479	0/0:19,0:18:45.09:0,45,340	0/0:6,0:4:8.98:0,9,72
chr10	21649648	.	GTGTGTGTGTGTGTGTGTGTT	G	5188.31	PASS	AB=1.000;AC=44;AF=0.846;AN=52;BaseQRankSum=-1.700;DP=481;FS=5.294;HRun=0;HaplotypeScore=220.4193;InbreedingCoeff=-0.0863;MQ=39.05;MQ0=69;MQRankSum=1.739;QD=12.78;ReadPosRankSum=-2.225;VQSLOD=2.6459;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:29:29.66:529,30,0	1/1:7,0:6:8.93:66,9,0	./.	./.	0/0:4,14:16:0.47:0,0,1	0/1:12,0:11:35.60:202,0,36	1/1:13,0:11:14.85:108,15,0	1/1:11,0:8:5.86:46,6,0	0/1:14,0:10:11.75:152,0,12	1/1:14,0:13:26.03:325,26,0	1/1:14,0:13:15.43:120,15,0	1/1:15,0:12:20.98:276,21,0	1/1:13,0:11:7.92:202,8,0	1/1:17,0:16:30.57:392,31,0	1/1:18,0:17:23.66:291,24,0	0/1:9,0:5:72.10:81,0,72	0/1:27,0:23:53.67:491,0,54	1/1:11,0:8:13.89:124,14,0	1/1:7,0:4:5.16:42,5,0	1/1:19,0:18:26.90:238,27,0	0/1:25,0:19:34.05:115,0,34	1/1:10,12:19:3.95:135,4,0	1/1:13,0:9:9:99,9,0	0/1:21,0:19:12.48:58,0,12	1/1:21,0:18:31.84:313,32,0	1/1:28,0:23:29.72:291,30,0	1/1:9,10:18:14.71:450,15,0	1/1:6,0:4:5.97:44,6,0
chr10	21650071	.	GGT	G	595.12	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.112;DP=498;FS=0.000;HRun=0;HaplotypeScore=60.9599;InbreedingCoeff=0.9703;MQ=83.37;MQ0=0;MQRankSum=-2.417;QD=31.32;ReadPosRankSum=0.781;VQSLOD=5.3097;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:33.11:0,33,578	0/0:5,0:5:15.05:0,15,263	0/0:19,0:19:48.16:0,48,800	0/0:22,0:22:47.89:0,48,718	0/0:29,0:29:87.30:0,87,1524	0/0:14,0:14:39.13:0,39,684	0/0:15,0:15:45.15:0,45,789	0/0:28,0:28:78.27:0,78,1352	0/0:8,0:8:21.07:0,21,368	0/0:25,0:25:72.23:0,72,1196	0/0:23,0:23:63.22:0,63,1099	0/0:13,0:13:36.11:0,36,603	0/0:14,0:14:39.11:0,39,654	0/0:22,0:22:63.21:0,63,1079	1/1:0,19:19:51.17:690,51,0	0/0:17,0:17:51.17:0,51,887	0/0:16,0:16:39.13:0,39,676	0/0:15,0:15:36.01:0,36,564	0/0:21,0:21:57.20:0,57,1000	0/0:26,0:25:72.23:0,72,1224	0/0:9,0:9:27.09:0,27,473	0/0:10,0:10:27.09:0,27,466	0/0:19,0:19:51.17:0,51,882	0/0:18,0:18:51.17:0,51,894	0/0:18,0:18:54.17:0,54,919	0/0:36,0:35:96.31:0,96,1625	0/0:19,0:19:54.18:0,54,938	0/0:6,0:6:18.02:0,18,257
chr10	21650282	.	TACAC	T	1104.89	PASS	AB=0.839;AC=24;AF=0.480;AN=50;BaseQRankSum=-0.789;DP=441;FS=5.067;HRun=0;HaplotypeScore=77.8454;InbreedingCoeff=0.4238;MQ=64.48;MQ0=11;MQRankSum=1.161;QD=5.50;ReadPosRankSum=1.854;VQSLOD=1.1658;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:5,0:5:6.02:0,6,116	./.	./.	0/0:10,0:10:9.03:0,9,202	0/1:12,6:18:38.53:124,0,39	0/1:26,1:27:0.46:98,0,0	0/0:23,0:23:3.42:0,3,20	1/1:7,3:10:3.01:46,3,0	1/1:8,2:10:5.85:60,6,0	1/1:9,4:14:11.91:153,12,0	1/1:9,1:10:2.83:45,3,0	0/0:13,0:13:0.47:0,0,1	0/1:10,1:12:6.42:40,0,6	0/0:10,0:17:6.02:0,6,95	0/0:14,0:14:6:0,6,75	0/0:21,0:27:18.06:0,18,245	1/1:6,2:8:3.01:46,3,0	0/0:11,0:11:9.03:0,9,163	0/0:17,0:17:9.02:0,9,135	0/0:16,0:16:6.02:0,6,120	0/0:9,0:14:8.06:0,8,126	1/1:6,1:7:3.01:46,3,0	1/1:17,8:25:18.06:277,18,0	1/1:22,4:26:6.02:92,6,0	0/1:17,5:21:0.22:97,0,0	1/1:6,2:8:4.32:89,4,0	1/1:2,1:3:3.01:46,3,0
chr10	21650889	.	TGA	T	7599.29	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=11.631;DP=749;FS=0.311;HRun=0;HaplotypeScore=95.5398;InbreedingCoeff=0.9994;MQ=82.06;MQ0=1;MQRankSum=-4.462;QD=39.79;ReadPosRankSum=3.042;VQSLOD=6.5379;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,60:59:99:2430,166,0	0/0:8,0:8:24.08:0,24,449	0/0:18,0:18:51.15:0,51,870	0/0:21,0:22:39.48:0,39,877	1/1:1,23:24:60.12:835,60,0	0/0:24,0:24:69.24:0,69,1285	0/0:29,0:29:87.27:0,87,1567	0/0:24,0:24:72.24:0,72,1318	0/0:20,0:20:57.20:0,57,1067	0/0:34,0:34:99:0,99,1824	0/0:24,0:24:72.25:0,72,1349	0/0:23,0:23:63.18:0,63,1109	0/0:31,0:31:93.30:0,93,1709	0/0:22,0:22:66.23:0,66,1236	0/0:42,0:42:99:0,123,2296	0/0:26,0:26:75.24:0,75,1373	0/0:34,0:34:96.31:0,96,1765	0/0:18,0:18:54.19:0,54,1003	0/0:16,0:16:48.16:0,48,870	0/0:36,0:36:99:0,102,1800	0/0:34,0:34:99:0,102,1871	1/1:0,25:25:63.14:902,63,0	0/0:22,0:22:66.18:0,66,1127	0/0:26,0:26:75.24:0,75,1358	0/0:25,0:25:75.26:0,75,1395	1/1:1,41:42:70.25:1710,70,0	1/1:0,31:31:90.30:1325,90,0	1/1:0,9:9:27.09:398,27,0
chr10	21651151	.	CT	C	2470.19	PASS	AB=0.836;AC=13;AF=0.232;AN=56;BaseQRankSum=-7.183;DP=703;FS=2.264;HRun=9;HaplotypeScore=139.4891;InbreedingCoeff=0.7447;MQ=81.07;MQ0=4;MQRankSum=-0.816;QD=12.60;ReadPosRankSum=0.209;VQSLOD=2.3124;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,16:18:48.02:439,48,0	0/0:13,0:13:31.91:0,32,178	0/0:55,0:30:60.26:0,60,573	0/1:52,1:29:29.34:29,0,235	1/1:2,23:25:62.87:550,63,0	0/0:26,0:26:69.18:0,69,776	0/0:15,0:15:33.10:0,33,381	0/0:26,0:26:69.16:0,69,760	0/0:18,0:18:51.14:0,51,577	0/0:31,0:31:81.24:0,81,935	0/0:33,0:33:85.47:0,85,955	0/0:17,0:17:48.10:0,48,539	0/0:24,0:24:60.16:0,60,672	0/0:24,0:24:60.16:0,60,675	0/0:31,0:31:86.51:0,87,460	0/0:13,0:13:31.85:0,32,178	0/0:21,0:21:11.39:0,11,223	0/0:26,0:26:72.20:0,72,820	0/1:24,1:25:6.34:6,0,220	0/0:35,0:35:89.17:0,89,510	0/0:24,0:23:43.74:0,44,241	1/1:0,19:19:54.03:494,54,0	0/0:23,0:23:57.17:0,57,657	0/0:19,0:19:54.16:0,54,622	0/0:33,0:33:81.22:0,81,916	0/1:6,20:26:3.25:476,0,3	1/1:4,19:23:54.03:494,54,0	1/1:1,6:7:18:164,18,0
chr10	21651167	.	G	GA	9932.62	PASS	AB=0.708;AC=37;AF=0.661;AN=56;BaseQRankSum=-13.358;DP=690;FS=0.000;HRun=10;HaplotypeScore=123.9987;InbreedingCoeff=0.7226;MQ=79.27;MQ0=6;MQRankSum=-0.512;QD=22.32;ReadPosRankSum=1.632;VQSLOD=3.7534;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:41.95:0,42,345	1/1:1,9:10:27.07:288,27,0	0/0:60,0:31:21.30:0,21,269	0/0:47,0:26:1.05:0,1,75	0/0:23,0:23:36.20:0,36,460	1/1:1,21:22:57.14:608,57,0	0/1:7,5:12:34.19:81,0,34	1/1:8,18:27:37.05:560,37,0	1/1:2,14:16:45.03:465,45,0	1/1:4,22:26:66.17:703,66,0	1/1:5,27:32:72.05:795,72,0	1/1:1,13:15:41.94:430,42,0	1/1:6,12:18:36.09:383,36,0	1/1:1,26:27:66.17:704,66,0	0/0:30,0:31:79.91:0,80,646	0/1:4,10:14:19.17:226,0,19	1/1:2,22:24:54.14:576,54,0	1/1:9,23:34:44.90:586,45,0	1/1:6,15:21:42.09:439,42,0	1/1:6,26:34:28.31:765,28,0	1/1:3,17:21:42.41:431,42,0	0/0:20,0:20:50.94:0,51,419	1/1:3,23:27:35.45:583,35,0	1/1:2,19:21:51.13:544,51,0	1/1:6,27:34:69.01:718,69,0	0/0:23,1:24:30.93:0,31,460	0/0:18,0:17:41.95:0,42,345	0/1:8,2:10:39.51:50,0,40
chr10	21651337	.	GA	G	2910.90	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=10.040;DP=569;FS=4.862;HRun=7;HaplotypeScore=59.8174;InbreedingCoeff=0.8999;MQ=80.30;MQ0=0;MQRankSum=-0.246;QD=21.40;ReadPosRankSum=1.239;VQSLOD=3.3684;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,28:30:69.15:704,69,0	0/0:11,0:11:33.11:0,33,415	0/0:15,0:15:45.09:0,45,512	0/1:17,0:17:16.98:17,0,344	1/1:0,27:27:75.17:765,75,0	0/0:24,0:24:63.20:0,63,792	0/0:16,0:16:48.15:0,48,604	0/0:34,0:34:90.28:0,90,1121	0/0:25,0:25:69.22:0,69,868	0/0:25,0:25:69.22:0,69,868	0/0:24,0:24:69.20:0,69,854	0/0:14,0:14:42.13:0,42,528	0/0:21,0:21:62.85:0,63,748	0/0:29,0:29:87.28:0,87,1094	0/0:22,0:22:66.21:0,66,830	0/0:19,0:19:57.17:0,57,705	0/0:17,0:17:48.13:0,48,578	0/0:19,0:19:57.18:0,57,717	0/0:21,0:21:57.18:0,57,717	0/0:23,0:23:66.21:0,66,830	0/0:19,0:19:57.18:0,57,717	1/1:1,7:8:21.05:214,21,0	0/0:20,0:20:60.19:0,60,755	0/0:17,0:17:48.15:0,48,603	0/0:18,0:18:54.15:0,54,655	1/1:2,23:25:34.44:666,34,0	1/1:2,20:22:51.11:520,51,0	1/1:0,7:7:21.05:214,21,0
chr10	21652117	.	AT	A	2146.04	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=10.078;DP=579;FS=0.847;HRun=10;HaplotypeScore=57.7134;InbreedingCoeff=0.8810;MQ=71.65;MQ0=0;MQRankSum=1.581;QD=17.59;ReadPosRankSum=2.759;VQSLOD=4.2480;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:18:24.96:0,25,486	1/1:4,14:19:37.91:318,38,0	0/0:16,0:15:26.16:0,26,216	0/1:12,0:11:19.82:20,0,107	0/0:27,2:29:26.10:0,26,743	0/0:22,1:23:34.11:0,34,604	0/0:18,0:18:39.11:0,39,431	0/0:36,0:36:87.24:0,87,962	0/0:15,1:16:19.07:0,19,438	0/0:22,0:22:57.15:0,57,625	0/0:27,1:28:52.16:0,52,803	0/0:27,0:27:75.19:0,75,820	0/0:28,0:28:78.19:0,78,852	0/0:22,0:22:54.15:0,54,597	0/0:28,0:29:84.04:0,84,900	1/1:1,18:19:47.99:417,48,0	1/1:1,18:19:47.98:416,48,0	0/0:17,0:18:50.97:0,51,545	1/1:2,9:11:26.95:227,27,0	1/1:3,26:29:74.98:651,75,0	1/1:0,13:13:32.99:287,33,0	0/0:12,0:12:7.05:0,7,306	0/0:21,0:21:63:0,63,678	0/0:14,0:14:42.10:0,42,457	0/0:15,0:16:21.96:0,22,445	0/0:28,0:28:66.18:0,66,730	0/0:28,0:29:80.97:0,81,851	0/0:6,0:7:17.88:0,18,180
chr10	21653726	.	CTTTTT	C	4455.87	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=9.920;DP=567;FS=3.044;HRun=14;HaplotypeScore=117.2258;InbreedingCoeff=0.9917;MQ=69.40;MQ0=1;MQRankSum=-1.375;QD=26.37;ReadPosRankSum=9.239;VQSLOD=2.8928;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:9,25:34:60.02:991,60,0	0/0:6,0:9:21.07:0,21,517	0/0:20,0:15:26.55:0,27,448	0/0:16,0:15:20.85:0,21,337	1/1:9,20:29:45.19:788,45,0	0/0:17,0:19:54.19:0,54,1379	0/0:18,0:20:42.14:0,42,1117	0/0:25,0:26:61.44:0,61,1534	0/0:14,0:17:45.14:0,45,1078	0/0:24,0:24:60.21:0,60,1577	0/0:8,0:10:30.10:0,30,785	0/0:24,0:24:69.22:0,69,1808	0/0:32,0:33:93.32:0,93,2487	0/0:12,0:17:39.13:0,39,1048	1/1:5,0:26:39.82:149,40,0	0/0:23,0:25:66.23:0,66,1683	0/0:14,0:19:39.57:0,40,898	0/0:17,0:17:45.15:0,45,1242	0/0:17,0:20:39.13:0,39,1010	0/0:13,0:23:63.22:0,63,1536	0/0:10,0:10:21.53:0,22,429	1/1:6,10:16:29.96:494,30,0	0/0:16,0:16:36.12:0,36,927	0/0:18,0:18:48.16:0,48,1298	0/0:12,0:13:33.11:0,33,870	1/1:11,13:24:41.92:694,42,0	1/1:5,30:35:68.44:1141,68,0	1/1:1,4:5:12.03:199,12,0
chr10	21654097	.	GA	G	3103.53	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=12.927;DP=632;FS=10.214;HRun=8;HaplotypeScore=60.3111;InbreedingCoeff=0.9866;MQ=73.02;MQ0=0;MQRankSum=-0.507;QD=23.33;ReadPosRankSum=1.341;VQSLOD=3.8694;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:57.17:0,57,687	1/1:0,6:6:15.02:145,15,0	0/0:13,0:13:31.64:0,32,358	0/0:8,0:8:14.47:0,14,191	0/0:43,0:43:99:0,117,1413	0/0:31,0:31:90.28:0,90,1087	0/0:14,0:14:42.13:0,42,506	0/0:40,0:40:99:0,105,1269	0/0:18,0:18:51.16:0,51,616	0/0:30,0:30:45.80:0,46,799	0/0:30,0:30:81.25:0,81,977	0/0:23,0:23:66.19:0,66,786	0/0:37,0:37:99:0,102,1231	0/0:19,0:19:48.14:0,48,569	0/0:29,0:29:78.23:0,78,932	1/1:5,23:28:26.86:543,27,0	1/1:0,26:26:75.12:724,75,0	0/0:18,0:18:48.12:0,48,556	1/1:3,22:25:66.09:632,66,0	1/1:2,28:30:84.13:811,84,0	1/1:2,16:18:45.07:435,45,0	0/0:16,0:16:45.14:0,45,543	0/0:20,0:20:57.16:0,57,677	0/0:13,0:13:36.07:0,36,419	0/0:21,0:21:54.17:0,54,652	0/0:30,0:30:84.25:0,84,1005	0/0:16,0:16:48.15:0,48,580	0/0:9,0:9:12.02:0,12,133
chr10	21654316	.	GA	G	6064.65	PASS	AB=0.684;AC=47;AF=0.839;AN=56;BaseQRankSum=-0.971;DP=599;FS=7.317;HRun=13;HaplotypeScore=80.6442;InbreedingCoeff=0.3723;MQ=72.22;MQ0=1;MQRankSum=-1.422;QD=11.05;ReadPosRankSum=3.686;VQSLOD=4.4709;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,14:21:13.72:245,14,0	1/1:3,0:15:19.88:58,20,0	0/1:12,1:13:5.02:5,0,78	0/0:17,0:14:11.38:0,11,90	0/1:12,19:33:21.67:338,0,22	1/1:7,12:24:19.64:260,20,0	1/1:4,19:24:48.06:339,48,0	1/1:7,20:31:32.57:366,33,0	1/1:1,10:13:30.92:209,31,0	0/1:10,15:25:9.96:237,0,10	1/1:4,14:18:20.53:282,21,0	1/1:7,19:27:43.66:312,44,0	1/1:5,22:30:71.72:499,72,0	1/1:6,18:24:49.92:371,50,0	0/0:8,0:33:56.68:0,57,322	1/1:5,0:33:46.81:137,47,0	1/1:1,0:9:10.18:30,10,0	1/1:4,8:13:19.88:137,20,0	1/1:6,0:22:34.39:101,34,0	1/1:0,0:11:16.28:48,16,0	1/1:5,0:11:9.19:27,9,0	1/1:9,16:26:24.84:309,25,0	1/1:3,17:22:48.78:340,49,0	1/1:2,16:19:17.61:283,18,0	1/1:7,21:30:57.71:406,58,0	1/1:3,16:21:54.70:376,55,0	0/1:9,11:20:16.61:221,0,17	0/1:5,9:14:5.44:129,0,5
chr10	21654936	.	C	CT	4046.56	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-12.843;DP=725;FS=1.651;HRun=8;HaplotypeScore=67.7336;InbreedingCoeff=0.9951;MQ=81.04;MQ0=0;MQRankSum=-2.001;QD=29.75;ReadPosRankSum=0.373;VQSLOD=3.7634;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,111,1010	1/1:0,6:6:18.05:208,18,0	0/0:24,0:24:35.17:0,35,447	0/0:23,0:23:44.94:0,45,411	0/0:19,0:19:51.03:0,51,466	0/0:26,0:26:75.02:0,75,681	0/0:18,0:18:51.03:0,51,467	0/0:38,0:38:93.03:0,93,848	0/0:28,0:28:78.02:0,78,709	0/0:36,0:36:99:0,99,906	0/0:23,0:23:65.99:0,66,592	0/0:28,0:28:69.02:0,69,627	0/0:28,0:28:80.98:0,81,721	0/0:23,0:23:63.01:0,63,572	0/0:35,0:35:90:0,90,814	1/1:5,30:35:63.27:978,63,0	1/1:3,28:31:81.23:924,81,0	0/0:20,0:20:45:0,45,407	1/1:2,11:13:36.11:414,36,0	1/1:1,30:31:84.25:969,84,0	1/1:2,18:20:48.14:554,48,0	0/0:31,0:31:84.04:0,84,769	0/0:32,0:32:87.05:0,87,796	0/0:29,0:29:81.01:0,81,731	0/0:20,0:20:53.99:0,54,485	0/0:31,0:31:81.03:0,81,741	0/0:31,0:31:78.03:0,78,714	0/0:7,0:7:15.01:0,15,137
chr10	21656006	.	AGT	A	6913.54	PASS	AB=0.674;AC=38;AF=0.679;AN=56;BaseQRankSum=-3.969;DP=678;FS=2.648;HRun=0;HaplotypeScore=129.1544;InbreedingCoeff=0.5701;MQ=58.69;MQ0=5;MQRankSum=3.706;QD=14.17;ReadPosRankSum=5.035;VQSLOD=4.5788;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:34:11.64:0,12,94	0/1:1,0:11:22.50:50,0,22	0/0:36,0:15:8.98:0,9,81	0/1:34,0:17:17.02:17,0,186	0/0:11,0:27:6.20:0,6,61	1/1:6,18:23:42.12:492,42,0	1/1:5,12:18:32.93:366,33,0	1/1:22,12:35:38.92:411,39,0	1/1:3,25:28:57.17:668,57,0	1/1:12,20:32:57.15:659,57,0	1/1:4,7:13:0.79:181,1,0	1/1:6,18:25:50.98:577,51,0	0/1:5,19:24:29.39:605,0,29	1/1:9,24:33:69.20:809,69,0	1/1:12,0:36:31.25:154,31,0	1/1:3,0:24:31.97:175,32,0	0/1:6,0:16:1.55:63,0,2	1/1:3,5:9:23.86:233,24,0	1/1:9,0:14:4.53:38,5,0	1/1:5,0:29:36.93:182,37,0	1/1:7,0:17:3:25,3,0	0/0:8,0:20:4.68:0,5,34	1/1:6,13:19:29.98:352,30,0	1/1:7,14:22:41.95:471,42,0	1/1:8,16:24:33.10:387,33,0	0/0:12,0:31:41.33:0,41,304	0/0:11,0:29:24.32:0,24,194	0/0:11,0:11:20.60:0,21,181
chr10	21656904	.	A	AAC	3691.63	PASS	AB=0.683;AC=10;AF=0.179;AN=56;BaseQRankSum=-7.161;DP=595;FS=3.947;HRun=0;HaplotypeScore=89.0852;InbreedingCoeff=0.1101;MQ=61.22;MQ0=4;MQRankSum=-1.607;QD=17.92;ReadPosRankSum=1.669;VQSLOD=3.7585;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:17,22:43:6.46:507,6,0	0/0:10,0:10:9.98:0,10,32	0/0:25,0:13:6.07:0,6,41	0/0:19,0:12:0.50:0,0,190	0/1:18,15:33:75.20:846,0,75	0/0:25,0:26:60.01:0,60,688	0/0:14,0:16:41.77:0,42,442	0/0:39,0:39:60.14:0,60,680	0/0:14,0:14:32.93:0,33,369	0/0:20,0:22:50.63:0,51,539	0/0:13,0:14:29.91:0,30,321	0/0:13,0:13:36.09:0,36,415	0/0:17,0:18:41.96:0,42,476	0/0:20,0:20:57.16:0,57,663	1/1:3,16:19:1.08:488,1,0	0/0:19,0:19:33.64:0,34,193	0/1:34,0:33:56.72:57,0,248	0/0:14,0:14:32.69:0,33,363	0/0:13,0:13:22.50:0,23,180	0/0:21,0:21:21.35:0,21,145	0/0:25,0:25:22.53:0,23,161	0/1:6,14:21:28.98:516,0,29	0/0:20,0:21:41.94:0,42,460	0/0:14,0:14:29.45:0,29,354	0/0:26,0:26:62.41:0,62,669	0/1:8,10:19:64.54:476,0,65	0/1:6,11:18:40.77:350,0,41	0/1:6,13:19:30.45:450,0,30
chr10	21656926	.	G	GACAC	4003.93	PASS	AB=0.963;AC=13;AF=0.232;AN=56;BaseQRankSum=-7.812;DP=635;FS=0.000;HRun=0;HaplotypeScore=112.5872;InbreedingCoeff=0.8986;MQ=61.23;MQ0=5;MQRankSum=0.642;QD=26.52;ReadPosRankSum=2.178;VQSLOD=2.9946;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:42:7.43:0,7,361	1/1:1,6:7:18.06:449,18,0	0/1:25,0:9:4.93:5,0,155	0/0:22,0:12:14.96:0,15,172	0/0:37,0:37:58.30:0,58,640	0/0:31,0:31:75.25:0,75,1217	0/0:22,0:22:52.03:0,52,788	0/0:27,0:27:51.15:0,51,771	0/0:18,0:18:45.15:0,45,735	0/0:23,0:23:54.64:0,55,854	0/0:14,0:14:27.08:0,27,424	0/0:18,0:18:36.11:0,36,577	0/0:20,0:20:57.18:0,57,912	0/0:21,0:24:57.14:0,57,833	0/0:21,0:21:44.26:0,44,400	1/1:5,11:17:13.59:652,14,0	1/1:16,18:35:39.13:874,39,0	0/0:21,0:21:37.74:0,38,518	1/1:6,10:18:36.09:615,36,0	1/1:5,14:19:23.67:534,24,0	1/1:3,21:28:36.12:875,36,0	0/0:19,0:19:43.81:0,44,435	0/0:19,0:21:45.06:0,45,641	0/0:16,0:16:39.09:0,39,578	0/0:27,0:27:59.54:0,60,960	0/0:21,0:21:51.90:0,52,631	0/0:16,0:16:32.41:0,32,308	0/0:24,0:24:58.12:0,58,577
chr10	21657219	.	A	ATCTCTCTCTC	1468.31	PASS	AB=0.917;AC=14;AF=0.250;AN=56;BaseQRankSum=1.811;DP=438;FS=8.817;HRun=0;HaplotypeScore=166.3133;InbreedingCoeff=0.4670;MQ=76.61;MQ0=6;MQRankSum=-1.207;QD=13.47;ReadPosRankSum=0.402;VQSLOD=2.2231;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:47.85:0,48,860	1/1:0,3:6:6.02:182,6,0	0/0:34,0:32:89.43:0,89,1801	0/0:27,0:19:10.25:0,10,981	0/0:19,0:19:48.09:0,48,913	0/0:21,0:21:57:0,57,1238	0/0:15,0:15:29.90:0,30,550	0/0:39,0:39:99:0,106,2625	0/0:13,0:14:35.79:0,36,796	0/0:13,0:12:36.12:0,36,884	0/0:14,0:14:35.15:0,35,765	0/0:12,0:13:36.12:0,36,899	0/0:12,0:12:24.08:0,24,692	0/0:15,0:15:41.90:0,42,797	0/1:11,0:11:99:145,0,238	1/1:10,1:12:5.79:287,6,0	1/1:2,10:13:9.03:408,9,0	0/0:9,0:9:27.09:0,27,631	0/1:6,4:11:55.81:372,0,56	1/1:10,0:10:2.01:71,2,0	1/1:10,0:9:3.06:46,3,0	0/0:13,0:13:33.06:0,33,797	0/0:15,0:15:29.75:0,30,576	0/0:6,0:6:12.04:0,12,294	0/0:15,0:15:38.92:0,39,915	0/1:17,0:16:99:107,0,915	0/1:18,0:18:8.02:8,0,631	0/0:11,0:10:25.90:0,26,659
chr10	21657223	.	ATCTCTC	A	4886.68	PASS	AB=0.619;AC=25;AF=0.446;AN=56;BaseQRankSum=-0.137;DP=471;FS=1.299;HRun=0;HaplotypeScore=135.4826;InbreedingCoeff=0.7649;MQ=72.02;MQ0=6;MQRankSum=-3.394;QD=25.32;ReadPosRankSum=1.343;VQSLOD=4.3002;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:5.29:0,5,103	0/0:3,0:3:2.74:0,3,77	0/0:34,0:29:6.91:0,7,139	0/0:34,0:22:9.77:0,10,340	0/0:27,0:28:11.46:0,11,202	1/1:10,11:21:36.12:677,36,0	1/1:7,9:16:18.05:307,18,0	1/1:22,15:38:46.60:861,47,0	1/1:5,8:13:30.09:527,30,0	1/1:7,5:11:18.06:332,18,0	1/1:6,7:13:18.06:358,18,0	0/1:5,7:13:7.07:399,0,7	1/1:4,4:9:12.04:227,12,0	1/1:6,9:15:18.06:356,18,0	0/0:13,0:14:11.07:0,11,278	0/0:14,0:14:12.41:0,12,288	0/0:15,0:15:15.52:0,16,334	1/1:8,1:9:3.01:63,3,0	0/0:16,0:15:27.09:0,27,583	0/0:16,0:15:6.14:0,6,112	0/0:9,0:8:7.55:0,8,68	0/0:18,0:17:9.87:0,10,129	1/1:5,8:13:14.68:298,15,0	1/1:2,4:6:6.02:124,6,0	1/1:6,9:15:18.53:356,19,0	0/0:12,0:19:27.09:0,27,556	0/0:12,0:20:12.49:0,12,204	0/0:13,0:12:6.49:0,6,156
chr10	21657261	.	A	AACAC	759.29	PASS	AB=0.905;AC=32;AF=0.640;AN=50;BaseQRankSum=-1.030;DP=430;FS=0.000;HRun=0;HaplotypeScore=157.0997;InbreedingCoeff=0.2342;MQ=41.50;MQ0=18;MQRankSum=-1.477;QD=2.80;ReadPosRankSum=1.065;VQSLOD=2.5769;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:14:6.01:0,6,74	./.	./.	./.	0/1:17,0:17:0:1,0,0	1/1:24,0:21:3.01:37,3,0	0/1:20,0:17:0:0,0,0	1/1:30,0:28:1.82:5,2,0	0/1:12,0:12:0:0,0,0	1/1:11,0:9:3.48:38,3,0	0/0:13,0:13:0.81:0,1,3	1/1:19,0:16:4.10:36,4,0	1/1:8,0:7:3.01:37,3,0	1/1:14,0:14:6.02:129,6,0	1/1:16,0:15:3.79:105,4,0	0/1:9,1:15:12.49:150,0,12	0/1:16,0:16:14.75:15,0,21	1/1:5,0:4:3.01:54,3,0	1/1:11,0:11:0.94:3,1,0	1/1:13,0:12:3.01:49,3,0	0/0:11,0:9:1.43:0,1,4	0/1:6,4:9:0:0,0,0	0/0:14,0:13:0.47:0,0,1	0/0:10,0:10:2.71:0,3,45	0/0:22,0:19:0.17:0,0,1	1/1:14,0:14:9.09:104,9,0	1/1:8,0:7:6:90,6,0	1/1:7,0:7:3.35:16,3,0
chr10	21658625	.	AACATACACACAC	A	3220.76	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=6.705;DP=580;FS=25.294;HRun=0;HaplotypeScore=178.7631;InbreedingCoeff=0.7881;MQ=51.93;MQ0=19;MQRankSum=-1.883;QD=17.50;ReadPosRankSum=-0.108;VQSLOD=0.9713;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:44:1.21:0,1,66	1/1:11,2:13:5.20:237,5,0	0/0:35,0:8:24:0,24,262	0/0:54,0:12:0.09:0,0,261	1/1:0,29:30:3.27:39,3,0	0/0:14,0:14:1.24:0,1,360	0/0:25,0:25:35.71:0,36,421	0/0:33,0:32:84.05:0,84,1086	0/0:11,0:11:20.68:0,21,296	0/0:22,0:23:60.17:0,60,1917	0/0:18,0:17:18.02:0,18,409	0/0:17,0:17:18.43:0,18,377	0/0:13,0:14:23.24:0,23,378	0/0:20,0:19:35.93:0,36,521	0/0:12,0:13:22.95:0,23,510	1/1:6,5:11:20.59:378,21,0	1/1:0,19:22:18.06:556,18,0	0/0:22,0:21:56.97:0,57,1384	1/1:0,7:7:21.01:232,21,0	1/1:1,20:22:14.81:332,15,0	1/1:19,0:19:14.40:195,14,0	1/1:1,13:14:2.34:34,2,0	0/0:18,0:18:25.73:0,26,505	0/0:15,0:15:15.02:0,15,560	0/0:19,0:18:20.95:0,21,310	1/1:2,0:25:53.74:901,54,0	1/1:0,0:13:14.73:459,15,0	1/1:0,0:7:3.01:56,3,0
chr10	21658629	.	T	TACACAC	1758.55	PASS	AB=0.906;AC=33;AF=0.635;AN=52;BaseQRankSum=-4.893;DP=610;FS=15.080;HRun=0;HaplotypeScore=157.7881;InbreedingCoeff=0.4601;MQ=52.13;MQ0=20;MQRankSum=1.449;QD=4.60;ReadPosRankSum=-3.430;VQSLOD=1.0210;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:43,0:43:4.61:96,5,0	0/0:14,0:14:2.88:0,3,42	./.	./.	0/0:32,0:31:0.73:0,1,1	1/1:9,0:17:3.01:47,3,0	1/1:19,6:27:3.01:39,3,0	1/1:32,0:31:2.78:38,3,0	1/1:9,4:13:9.03:240,9,0	1/1:17,0:23:20.18:407,20,0	1/1:12,5:19:2.77:39,3,0	1/1:11,7:21:2.94:31,3,0	1/1:9,5:16:6.02:134,6,0	1/1:18,1:19:9.02:175,9,0	1/1:4,7:12:15.05:313,15,0	0/0:11,0:11:4.09:0,4,45	0/0:23,0:23:12.86:0,13,205	1/1:16,0:29:12.04:167,12,0	0/0:9,0:8:2.98:0,3,22	0/0:22,0:22:5.67:0,6,82	0/0:15,0:14:2.72:0,3,22	0/1:14,0:14:0:0,0,0	1/1:13,6:21:3.01:96,3,0	1/1:9,7:19:5.97:76,6,0	0/1:13,6:22:0:0,0,0	0/1:23,0:23:4.83:5,0,209	0/0:13,0:13:14.83:0,15,194	1/1:7,0:7:0.47:1,0,0
chr10	21658813	.	AGCCCCAGCCAGG	A	10841.44	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=14.181;DP=439;FS=1.404;HRun=0;HaplotypeScore=164.6252;InbreedingCoeff=0.9558;MQ=72.71;MQ0=0;MQRankSum=-12.969;QD=84.04;ReadPosRankSum=1.585;VQSLOD=4.8413;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,20:23:48.16:1824,48,0	1/1:0,7:7:21.07:798,21,0	0/0:23,0:23:69.24:0,69,3244	0/0:18,0:18:54.17:0,54,2868	1/1:3,10:13:27.05:932,27,0	0/0:22,0:22:66.23:0,66,3977	0/0:19,0:19:57.19:0,57,3228	0/0:25,0:25:72.25:0,72,4429	0/0:14,0:13:39.13:0,39,2473	0/0:27,0:27:72.23:0,72,3988	0/0:8,0:8:24.08:0,24,1240	0/0:21,0:21:63.22:0,63,3615	0/0:16,0:16:48.16:0,48,2786	0/0:22,0:22:66.21:0,66,3913	0/0:19,0:19:57.20:0,57,3261	1/1:1,19:20:48.16:1825,48,0	1/1:1,14:15:36.12:1356,36,0	0/0:16,0:15:45.09:0,45,2441	1/1:0,6:6:18.03:457,18,0	1/1:0,3:3:9.03:342,9,0	1/1:0,7:7:9.03:342,9,0	1/1:1,7:8:21.07:798,21,0	0/0:12,0:12:36.06:0,36,2081	0/0:34,0:34:99:0,99,6210	0/0:14,0:13:36.12:0,36,1978	1/1:3,11:14:33.11:1255,33,0	1/1:1,8:9:21.07:798,21,0	1/1:0,4:4:3.01:114,3,0
chr10	21659197	.	TGTTA	T	2409.85	PASS	AB=0.981;AC=21;AF=0.375;AN=56;BaseQRankSum=1.318;DP=774;FS=35.018;HRun=0;HaplotypeScore=173.8818;InbreedingCoeff=-0.6030;MQ=47.86;MQ0=22;MQRankSum=-2.538;QD=4.73;ReadPosRankSum=-0.768;VQSLOD=1.2442;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:40,0:40:99:174,0,758	0/1:8,0:8:9.01:9,0,49	0/0:77,0:13:28.90:0,29,402	0/0:74,0:15:5.99:0,6,223	0/1:18,0:18:5.12:5,0,343	0/1:28,0:25:33.62:34,0,628	0/0:30,0:27:21.25:0,21,539	0/1:12,11:22:99:364,0,485	0/1:23,0:23:99:102,0,404	0/1:26,0:25:99:324,0,478	0/1:9,0:9:65.95:66,0,145	0/1:24,0:24:99:109,0,379	0/1:24,0:24:99:124,0,400	0/1:33,0:33:99:118,0,677	0/0:37,0:36:99:0,99,1949	0/1:30,1:31:32.85:33,0,612	0/0:24,0:24:30.57:0,31,418	0/1:16,0:16:99:111,0,277	0/1:10,0:9:28.87:29,0,202	0/1:17,1:18:35.77:36,0,220	0/1:39,0:37:99:160,0,854	0/1:21,0:21:68.89:69,0,354	0/0:19,0:17:23.69:0,24,416	0/1:38,0:38:99:155,0,437	0/1:19,0:19:99:168,0,257	0/1:37,0:36:99:176,0,1305	0/1:23,0:23:99:202,0,507	0/0:4,0:4:6.02:0,6,136
chr10	21660131	.	T	TATATA	10339.12	PASS	AB=0.548;AC=23;AF=0.411;AN=56;BaseQRankSum=-14.213;DP=520;FS=2.950;HRun=0;HaplotypeScore=84.4642;InbreedingCoeff=0.8789;MQ=77.05;MQ0=0;MQRankSum=-2.192;QD=54.42;ReadPosRankSum=1.153;VQSLOD=5.3496;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,24:31:57.15:1607,57,0	1/1:2,1:3:3.01:88,3,0	0/0:19,0:19:33.11:0,33,613	0/0:5,0:5:3.01:0,3,58	1/1:6,15:21:45.15:1315,45,0	0/0:26,0:26:57.18:0,57,1071	0/0:15,0:15:30.09:0,30,547	0/0:23,0:23:39.13:0,39,747	0/0:27,0:27:69.21:0,69,1287	0/0:29,0:29:78.27:0,78,1494	0/0:30,0:30:75.26:0,75,1425	0/0:14,0:14:42.14:0,42,814	0/0:21,0:21:36.08:0,36,660	0/0:20,0:20:54.17:0,54,1014	0/0:28,0:28:69.21:0,69,1250	1/1:3,15:19:42.14:1234,42,0	1/1:5,8:13:21.07:617,21,0	0/0:21,0:21:47.72:0,48,896	1/1:6,14:19:42.14:1177,42,0	1/1:10,11:21:33.08:896,33,0	1/1:1,7:8:18.06:526,18,0	1/1:3,1:4:3.01:88,3,0	0/0:21,0:21:48.16:0,48,930	0/0:15,0:15:42.14:0,42,814	0/0:16,0:16:45.15:0,45,872	0/1:4,19:23:0.98:1469,0,1	1/1:5,13:20:33.11:970,33,0	1/1:2,5:7:12.04:352,12,0
chr10	21660372	.	GCA	G	8955.88	PASS	AB=1.000;AC=32;AF=0.571;AN=56;BaseQRankSum=-12.350;DP=531;FS=0.000;HRun=0;HaplotypeScore=105.5597;InbreedingCoeff=0.6615;MQ=56.49;MQ0=7;MQRankSum=8.146;QD=22.73;ReadPosRankSum=0.403;VQSLOD=5.1448;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:1.01:0,1,107	0/0:7,0:7:12.01:0,12,114	0/0:11,0:7:21:0,21,252	0/0:13,0:5:6.02:0,6,93	0/1:11,0:11:10.49:10,0,37	1/1:2,33:34:75.24:946,75,0	1/1:4,9:13:21.07:265,21,0	1/1:7,19:26:57.08:628,57,0	1/1:4,17:21:36.05:434,36,0	1/1:3,23:26:66.19:817,66,0	1/1:3,28:30:66.08:809,66,0	1/1:1,16:17:38.99:492,39,0	1/1:2,18:19:48.15:605,48,0	1/1:7,20:27:48.15:606,48,0	1/1:9,18:26:66.17:792,66,0	0/0:14,0:14:35.10:0,35,369	0/0:14,0:14:21.51:0,22,221	1/1:3,19:22:54.17:681,54,0	0/0:19,0:19:45.03:0,45,456	0/0:25,0:25:59.23:0,59,613	0/0:6,0:6:9.02:0,9,98	0/1:6,0:6:5.68:17,0,6	1/1:2,22:24:57.18:719,57,0	1/1:2,14:16:36.12:454,36,0	1/1:3,16:19:45.14:560,45,0	0/1:25,0:24:57.40:57,0,74	0/1:28,0:28:61.28:61,0,100	0/0:7,0:7:12.16:0,12,51
chr10	21660383	.	C	CAT	3100.15	PASS	AB=0.893;AC=17;AF=0.304;AN=56;BaseQRankSum=8.477;DP=545;FS=1.316;HRun=0;HaplotypeScore=138.9227;InbreedingCoeff=0.4030;MQ=54.70;MQ0=12;MQRankSum=-7.265;QD=17.03;ReadPosRankSum=2.036;VQSLOD=3.7018;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:11,8:19:35.98:383,0,36	0/1:8,0:8:28.84:29,0,54	0/0:13,0:8:20.99:0,21,243	0/0:13,0:5:11.94:0,12,135	0/1:3,5:8:6.99:184,0,7	0/0:38,0:37:88.07:0,88,548	0/0:16,0:16:41.33:0,41,278	0/0:32,0:27:37.12:0,37,374	0/0:19,0:19:32.17:0,32,189	0/0:24,0:24:61.87:0,62,356	0/0:33,0:32:73.41:0,73,473	0/0:17,0:17:41.01:0,41,248	0/0:22,0:21:58.70:0,59,366	0/0:22,0:22:46.79:0,47,275	0/0:27,0:26:62.06:0,62,377	0/1:15,0:15:79.87:80,0,81	0/1:13,0:13:21.22:65,0,21	0/0:23,0:23:61.59:0,62,377	0/1:17,0:17:44.93:45,0,121	0/1:26,2:28:54.46:220,0,54	1/1:8,0:8:13.58:76,14,0	1/1:1,5:6:8.86:148,9,0	0/0:25,0:25:55.57:0,56,327	0/0:17,0:17:41.08:0,41,255	0/0:22,0:22:52.92:0,53,337	1/1:11,15:25:64.13:906,64,0	1/1:13,15:28:42.26:904,42,0	1/1:3,3:6:15.05:247,15,0
chr10	21660385	.	C	CATAT	6060.52	PASS	AB=1.000;AC=22;AF=0.393;AN=56;BaseQRankSum=1.049;DP=549;FS=0.000;HRun=0;HaplotypeScore=152.3148;InbreedingCoeff=0.8217;MQ=54.60;MQ0=12;MQRankSum=-5.402;QD=33.86;ReadPosRankSum=1.614;VQSLOD=4.9621;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:19,0:19:76.73:246,0,77	1/1:5,2:7:9.03:190,9,0	0/0:13,0:8:11.99:0,12,150	0/0:13,0:5:12.04:0,12,163	0/1:8,0:8:17.60:136,0,18	0/0:38,0:37:90.28:0,90,1131	0/0:16,0:16:42.13:0,42,559	0/0:35,0:30:62.97:0,63,779	0/0:19,0:19:36.10:0,36,419	0/0:25,0:25:65.66:0,66,748	0/0:32,0:32:75.22:0,75,903	0/0:17,0:17:42.13:0,42,512	0/0:22,0:21:60.19:0,60,749	0/0:22,0:22:51.14:0,51,594	0/0:27,0:26:66.19:0,66,799	1/1:6,9:15:33.11:763,33,0	1/1:7,6:13:24.08:549,24,0	0/0:23,0:23:63.20:0,63,774	1/1:5,10:15:33.11:806,33,0	1/1:14,14:29:62.99:1320,63,0	1/1:6,3:9:18.06:394,18,0	1/1:5,0:5:9.02:103,9,0	0/0:26,0:26:57.17:0,57,678	0/0:17,0:17:42.13:0,42,524	0/0:23,0:23:53.89:0,54,679	1/1:26,0:25:63.17:758,63,0	1/1:26,0:26:27.55:634,28,0	1/1:7,0:7:15.04:162,15,0
chr10	21660412	.	C	CAT	6674.13	PASS	AC=24;AF=0.444;AN=54;BaseQRankSum=6.936;DP=512;FS=4.071;HRun=0;HaplotypeScore=122.4402;InbreedingCoeff=0.9479;MQ=51.09;MQ0=11;MQRankSum=-6.691;QD=39.73;ReadPosRankSum=-1.308;VQSLOD=6.0554;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,12:18:36.57:584,37,0	1/1:1,4:5:12.04:205,12,0	./.	0/0:6,0:1:3.01:0,3,39	1/1:2,6:8:15.05:257,15,0	0/0:33,0:32:84.19:0,84,1081	0/0:12,0:12:30.08:0,30,374	0/0:49,0:39:99:0,99,1289	0/0:20,0:20:48.05:0,48,592	0/0:20,0:20:57.19:0,57,749	0/0:29,0:29:69.21:0,69,891	0/0:17,0:17:42.12:0,42,537	0/0:19,0:19:54.18:0,54,709	0/0:16,0:16:39.08:0,39,493	0/0:23,0:23:57.19:0,57,749	1/1:5,7:12:24.08:410,24,0	1/1:4,10:14:33.09:535,33,0	0/0:28,0:28:63.15:0,63,794	1/1:0,22:22:63.21:1079,63,0	1/1:5,23:28:72.23:1198,72,0	1/1:3,6:9:21.05:317,21,0	1/1:3,2:5:6.02:97,6,0	0/0:26,0:26:75.23:0,75,971	0/0:23,0:23:60.16:0,60,757	0/0:18,0:18:39.13:0,39,512	1/1:3,21:23:63.22:1075,63,0	1/1:7,12:19:42.14:712,42,0	1/1:0,4:4:12.04:205,12,0
chr10	21660471	.	CTA	C	2319.59	PASS	AB=0.980;AC=26;AF=0.464;AN=56;BaseQRankSum=8.234;DP=660;FS=0.640;HRun=0;HaplotypeScore=183.5299;InbreedingCoeff=-0.4653;MQ=59.25;MQ0=4;MQRankSum=1.795;QD=4.55;ReadPosRankSum=1.412;VQSLOD=2.6833;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:28:3.68:205,4,0	0/1:9,0:9:8.53:51,0,9	0/0:20,0:12:36.09:0,36,463	0/0:27,0:19:29.59:0,30,593	0/1:25,0:25:37.17:238,0,37	0/1:23,2:25:99:176,0,267	0/1:14,2:15:55.77:56,0,188	0/1:37,0:37:99:146,0,419	0/0:33,1:34:2.18:0,2,594	0/1:37,1:37:43.68:44,0,587	0/1:24,0:24:29.23:29,0,379	0/0:27,0:27:26.44:0,26,505	0/1:24,0:23:35.14:35,0,364	0/1:17,3:20:71.45:71,0,296	0/1:37,0:37:47.04:215,0,47	0/1:14,1:15:32.90:162,0,33	0/1:18,0:18:1.43:151,0,1	0/1:24,0:24:23.31:23,0,397	0/1:18,0:18:66.66:67,0,124	0/1:29,0:29:17.66:226,0,18	0/1:32,0:27:12.76:156,0,13	1/1:6,0:6:13.12:53,13,0	0/1:21,0:21:23.15:23,0,322	0/0:41,0:41:57.77:0,58,723	0/1:14,0:14:33.11:33,0,204	0/1:26,0:25:22.32:141,0,22	0/1:23,0:23:28.81:166,0,29	1/1:1,0:1:2.74:12,3,0
chr10	21660472	.	TAC	T	7036.60	PASS	AB=0.945;AC=28;AF=0.500;AN=56;BaseQRankSum=12.463;DP=671;FS=7.769;HRun=0;HaplotypeScore=173.1108;InbreedingCoeff=0.8090;MQ=58.97;MQ0=4;MQRankSum=0.064;QD=22.55;ReadPosRankSum=2.791;VQSLOD=5.3304;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:10,16:27:52.92:605,53,0	1/1:3,5:9:20.28:227,20,0	0/0:20,0:11:10.83:0,11,118	0/0:27,0:19:27.05:0,27,348	1/1:4,21:25:35.28:737,35,0	0/1:24,1:25:33.83:34,0,606	0/0:16,1:16:6.90:0,7,456	0/0:37,0:36:75.26:0,75,1205	0/0:36,1:37:35.99:0,36,1355	0/0:39,0:39:84.45:0,84,1555	0/0:26,0:26:66.21:0,66,1028	0/0:29,0:29:68.90:0,69,1075	0/0:23,1:23:54.18:0,54,853	0/0:22,0:22:5.62:0,6,690	1/1:3,32:35:72.23:879,72,0	1/1:3,11:14:36.11:430,36,0	1/1:6,12:18:44.50:520,45,0	0/1:24,2:26:7.13:7,0,807	1/1:11,7:18:36.11:438,36,0	1/1:8,19:27:72.22:877,72,0	1/1:8,22:27:59.85:688,60,0	1/1:1,5:6:15.05:179,15,0	0/0:21,1:22:45.11:0,45,704	0/0:39,2:41:99:0,105,1650	0/0:16,0:16:36.11:0,36,557	1/1:5,21:25:66.18:782,66,0	1/1:5,17:23:50.99:598,51,0	1/1:0,1:1:3.01:37,3,0
chr10	21660641	.	TAC	T	7403.29	PASS	AB=0.776;AC=26;AF=0.464;AN=56;BaseQRankSum=4.027;DP=693;FS=20.238;HRun=0;HaplotypeScore=183.6903;InbreedingCoeff=0.8500;MQ=53.84;MQ0=13;MQRankSum=-1.589;QD=21.40;ReadPosRankSum=-0.366;VQSLOD=3.5294;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:56:82.64:0,83,1374	0/0:8,0:8:14.19:0,14,246	0/0:32,0:20:45.62:0,46,709	0/0:31,0:22:12.10:0,12,329	0/0:22,0:19:41.24:0,41,691	1/1:4,17:21:27.19:644,27,0	1/1:6,14:20:30.05:476,30,0	1/1:17,19:34:74.88:868,75,0	1/1:14,25:39:78.25:974,78,0	1/1:6,16:22:10.01:644,10,0	1/1:9,10:19:18.51:225,19,0	1/1:11,27:37:86.79:1086,87,0	1/1:6,21:26:58.12:714,58,0	1/1:5,14:18:36.11:449,36,0	0/0:38,1:37:28.02:0,28,1001	0/0:22,1:21:4.69:0,5,605	0/0:29,0:28:19.24:0,19,654	0/1:4,7:11:18.34:308,0,18	0/0:19,0:18:36.12:0,36,593	0/0:18,0:17:41.24:0,41,690	0/1:30,2:31:0.59:1,0,1056	0/0:4,0:4:12.04:0,12,198	1/1:1,12:13:15.03:188,15,0	1/1:11,11:18:21.07:262,21,0	1/1:12,15:26:45.59:564,46,0	0/0:29,0:29:75.25:0,75,1205	0/0:19,0:19:44.63:0,45,694	0/0:15,0:15:30.06:0,30,495
chr10	21660685	.	G	GAC	11180.05	PASS	AB=0.667;AC=51;AF=0.911;AN=56;BaseQRankSum=0.653;DP=790;FS=4.356;HRun=0;HaplotypeScore=251.3060;InbreedingCoeff=0.5813;MQ=41.16;MQ0=25;MQRankSum=2.678;QD=15.70;ReadPosRankSum=4.817;VQSLOD=4.5011;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:16,46:61:32.66:503,33,0	1/1:0,6:6:8.91:153,9,0	0/0:42,0:17:35.94:0,36,393	0/0:35,0:11:32.13:0,32,383	1/1:5,30:32:17.58:306,18,0	1/1:4,22:26:23.76:377,24,0	1/1:7,23:29:21.89:360,22,0	1/1:18,41:38:51.12:740,51,0	1/1:4,21:26:12.04:204,12,0	1/1:4,34:38:99:1728,102,0	1/1:2,18:22:8.60:136,9,0	1/1:9,30:39:32.46:527,32,0	1/1:4,16:19:14.88:241,15,0	1/1:3,18:21:11.94:204,12,0	0/1:14,14:26:99:177,0,152	1/1:2,28:26:26.59:458,27,0	1/1:4,30:32:33.31:529,33,0	1/1:3,9:13:15.05:255,15,0	1/1:7,15:21:54.16:856,54,0	1/1:3,22:23:17.83:306,18,0	1/1:6,27:30:2.35:51,2,0	1/1:0,4:4:12.04:204,12,0	1/1:4,9:12:6.02:102,6,0	1/1:5,19:22:5.94:102,6,0	1/1:5,19:24:11.69:179,12,0	1/1:3,26:29:75.05:1262,75,0	1/1:2,19:21:44.82:764,45,0	1/1:5,18:21:27.09:458,27,0
chr10	21662292	.	G	GA	3583.91	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-9.396;DP=642;FS=3.519;HRun=8;HaplotypeScore=117.4772;InbreedingCoeff=0.9989;MQ=82.01;MQ0=0;MQRankSum=0.494;QD=30.90;ReadPosRankSum=0.107;VQSLOD=1.8823;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:90.05:0,90,824	0/0:9,0:9:24.01:0,24,220	0/0:23,0:23:39.35:0,39,374	0/0:29,0:28:57.81:0,58,527	1/1:2,26:28:75.18:851,75,0	0/0:21,0:21:60.01:0,60,544	0/0:15,0:15:45.01:0,45,407	0/0:31,0:31:69:0,69,628	0/0:22,0:22:66.04:0,66,604	0/0:25,0:25:69.03:0,69,629	0/0:11,0:11:24:0,24,220	0/0:17,0:17:45.02:0,45,412	0/0:24,0:24:63.02:0,63,576	0/0:21,0:21:57.03:0,57,522	0/0:32,0:32:90.02:0,90,814	0/0:26,0:26:69:0,69,620	0/0:31,0:31:81.03:0,81,741	0/0:14,0:14:35.93:0,36,314	0/0:28,0:28:69.02:0,69,631	0/0:36,0:36:92.97:0,93,836	0/0:13,0:13:39.02:0,39,357	1/1:2,14:16:39.12:450,39,0	0/0:17,0:17:51.03:0,51,467	0/0:24,0:24:72.01:0,72,650	0/0:24,0:24:69.04:0,69,632	1/1:2,27:29:32.30:868,32,0	1/1:3,28:30:87.26:1000,87,0	1/1:0,12:12:36.11:415,36,0
chr10	21662836	.	TTGTG	T	346.08	PASS	AB=0.697;AC=3;AF=0.056;AN=54;BaseQRankSum=-2.851;DP=715;FS=10.915;HRun=0;HaplotypeScore=132.8746;InbreedingCoeff=0.5202;MQ=71.06;MQ0=13;MQRankSum=1.240;QD=4.33;ReadPosRankSum=0.309;VQSLOD=1.8932;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:26,18:46:62.29:140,0,62	0/0:8,0:8:6.02:0,6,86	0/0:28,0:20:0.47:0,0,1	./.	0/0:13,0:21:11.72:0,12,182	0/0:11,0:11:15.05:0,15,248	0/0:26,0:26:12.34:0,12,191	0/0:33,0:32:12.04:0,12,189	0/0:20,0:20:27.56:0,28,427	0/0:13,0:14:18.03:0,18,227	0/0:18,0:18:20.19:0,20,206	0/0:32,0:33:45.15:0,45,754	0/0:22,0:22:15.51:0,16,223	0/0:25,0:25:18.06:0,18,277	1/1:16,17:33:21.06:309,21,0	0/0:33,0:33:30.08:0,30,460	0/0:28,0:26:20.93:0,21,275	0/0:10,0:10:12.02:0,12,156	0/0:19,0:18:27.09:0,27,454	0/0:21,0:21:14.97:0,15,193	0/0:38,0:37:18.04:0,18,269	0/0:23,0:23:26.73:0,27,434	0/0:15,0:15:12.93:0,13,173	0/0:29,0:28:20.65:0,21,327	0/0:30,0:30:24.03:0,24,324	0/0:29,0:28:50.85:0,51,742	0/0:17,0:32:26.86:0,27,413	0/0:6,0:18:14.97:0,15,252
chr10	21662840	.	G	GTGTC	6608.24	PASS	AB=0.909;AC=34;AF=0.607;AN=56;BaseQRankSum=-3.370;DP=732;FS=30.066;HRun=0;HaplotypeScore=116.9289;InbreedingCoeff=-0.0663;MQ=64.93;MQ0=13;MQRankSum=1.791;QD=11.39;ReadPosRankSum=-0.426;VQSLOD=2.6916;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:56.94:0,57,476	0/1:8,0:8:47.70:48,0,82	0/0:23,0:15:36.31:0,36,372	0/0:49,0:28:65.55:0,66,644	0/1:19,0:19:99:110,0,135	0/1:6,5:12:10.85:173,0,11	1/1:4,26:32:12.50:265,12,0	1/1:31,0:31:77.92:721,78,0	1/1:0,21:22:27.09:726,27,0	1/1:3,14:19:42.85:562,43,0	0/1:4,13:19:8.89:306,0,9	1/1:6,26:36:0.38:923,0,0	1/1:4,18:25:19.68:419,20,0	1/1:6,19:27:18.04:419,18,0	0/0:33,0:32:53.76:0,54,499	0/1:33,1:34:99:116,0,320	0/1:30,0:28:76.36:76,0,224	1/1:10,0:10:28.89:312,29,0	0/1:17,0:16:73.60:74,0,109	0/1:24,0:24:21.80:22,0,257	0/1:39,0:38:52.12:52,0,331	0/1:22,0:22:96.16:96,0,232	0/1:2,13:15:21.36:75,0,21	1/1:2,27:30:20.60:564,21,0	1/1:28,2:30:26.76:372,27,0	0/1:27,0:26:79.05:79,0,268	0/1:31,0:31:82.70:83,0,269	0/1:19,0:19:14.61:15,0,93
chr10	21662842	.	G	GTC	3470.89	PASS	AB=0.901;AC=22;AF=0.393;AN=56;BaseQRankSum=4.259;DP=725;FS=30.114;HRun=0;HaplotypeScore=106.2782;InbreedingCoeff=0.5393;MQ=62.72;MQ0=14;MQRankSum=1.362;QD=10.24;ReadPosRankSum=0.804;VQSLOD=1.7053;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:60.26:0,60,445	0/0:8,0:8:7.82:0,8,94	0/0:23,0:14:35.60:0,36,371	0/0:47,0:26:65.51:0,66,625	0/0:19,0:19:17.25:0,17,157	0/1:12,1:13:0.28:125,0,0	1/1:30,1:31:14.91:186,15,0	1/1:7,27:33:68.55:702,69,0	1/1:21,0:21:27.08:324,27,0	0/1:20,1:21:11.78:308,0,12	0/1:17,1:18:28.86:124,0,29	1/1:33,1:34:27.04:445,27,0	1/1:24,0:24:1.82:173,2,0	1/1:22,2:24:21:255,21,0	0/0:34,0:33:56.55:0,57,433	0/1:33,0:33:24.51:25,0,315	0/0:29,0:27:28.19:0,28,261	1/1:9,1:10:29.83:268,30,0	0/0:18,0:16:22.02:0,22,165	0/0:24,0:24:20.74:0,21,276	0/0:39,0:38:37.62:0,38,371	0/0:22,0:22:2.07:0,2,240	0/1:14,0:14:4.60:58,0,5	1/1:31,0:30:20.85:249,21,0	0/1:8,21:31:18.37:230,0,18	0/0:26,0:25:20.14:0,20,313	0/0:30,0:30:15.91:0,16,289	0/0:19,0:19:16.47:0,16,149
chr10	21662875	.	T	TGTGTGC	3515.33	PASS	AB=1.000;AC=26;AF=0.464;AN=56;BaseQRankSum=10.110;DP=605;FS=12.381;HRun=0;HaplotypeScore=136.9663;InbreedingCoeff=-0.0340;MQ=64.53;MQ0=8;MQRankSum=-2.474;QD=7.88;ReadPosRankSum=1.891;VQSLOD=2.1538;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:55.83:0,56,553	1/1:1,3:9:9.03:184,9,0	0/0:21,0:15:44.98:0,45,425	0/0:19,0:12:32.13:0,32,315	0/1:24,0:24:31.77:32,0,227	0/0:14,0:14:7.53:0,8,221	0/1:26,0:26:7.07:7,0,233	0/0:20,0:19:45.77:0,46,407	0/1:23,0:23:61.68:62,0,148	0/1:20,0:20:50.27:50,0,248	0/1:16,0:16:22.40:22,0,141	0/1:35,0:35:99:102,0,216	0/1:28,0:28:21.25:21,0,288	0/1:23,0:23:28.39:28,0,195	0/0:23,0:23:35.89:0,36,441	1/1:10,15:30:28.84:649,29,0	1/1:5,13:23:20.60:400,21,0	0/0:10,0:10:9.51:0,10,104	1/1:5,0:14:41.90:520,42,0	1/1:6,11:17:5.69:115,6,0	1/1:8,0:31:14.64:273,15,0	0/1:20,0:20:99:129,0,149	0/0:12,0:12:5.63:0,6,139	0/1:21,0:21:37.16:37,0,149	0/1:21,0:21:4.82:5,0,251	0/1:27,0:27:99:308,0,210	0/1:20,0:20:61.79:468,0,62	0/1:15,0:15:15.46:103,0,15
chr10	21663606	.	T	TA	549.97	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-2.532;DP=604;FS=10.373;HRun=10;HaplotypeScore=60.8988;InbreedingCoeff=0.9455;MQ=74.90;MQ0=0;MQRankSum=-0.919;QD=13.09;ReadPosRankSum=-3.430;VQSLOD=1.6621;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,1:23:27.93:0,28,436	0/0:11,0:12:29:0,29,228	0/0:16,0:16:29.90:0,30,237	0/0:10,0:11:10.32:0,10,138	0/0:39,0:39:98.87:0,99,813	0/0:26,0:26:71.92:0,72,591	0/0:20,0:21:46.93:0,47,372	1/1:10,17:28:35.21:548,35,0	0/0:18,0:18:35.94:0,36,296	0/0:29,0:29:68.91:0,69,566	0/0:33,0:33:77.87:0,78,640	0/0:15,0:15:38.94:0,39,317	0/0:15,0:15:41.95:0,42,345	0/0:23,0:24:55.94:0,56,449	1/1:5,0:14:22.96:123,23,0	0/0:25,0:26:76.95:0,77,622	0/0:19,0:19:47.94:0,48,394	0/0:27,0:27:65.90:0,66,542	0/0:24,0:24:53.91:0,54,442	0/0:31,1:32:45.88:0,46,584	0/0:21,0:21:47.93:0,48,394	0/0:27,0:27:71.91:0,72,591	0/0:22,1:24:29.95:0,30,438	0/0:9,0:9:23.97:0,24,197	0/0:19,0:19:47.91:0,48,390	0/0:26,0:26:50.91:0,51,419	0/0:21,0:22:52.95:0,53,421	0/0:3,0:3:8.99:0,9,74
chr10	21666578	.	AG	A	5079.86	PASS	AB=0.825;AC=42;AF=0.750;AN=56;BaseQRankSum=-3.002;DP=532;FS=0.000;HRun=11;HaplotypeScore=87.4581;InbreedingCoeff=0.6793;MQ=72.82;MQ0=1;MQRankSum=0.419;QD=11.60;ReadPosRankSum=4.028;VQSLOD=4.5584;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,1:21:5.20:0,5,214	1/1:3,8:12:25.99:203,26,0	0/1:18,0:14:36.21:36,0,160	0/0:15,0:12:23.33:0,23,172	1/1:22,0:22:25.07:70,25,0	0/1:6,7:13:13.40:40,0,13	1/1:8,17:26:25.98:202,26,0	1/1:9,0:17:16.73:50,17,0	1/1:8,12:20:53.87:434,54,0	1/1:14,8:22:21.84:174,22,0	1/1:7,8:15:20.85:159,21,0	1/1:6,19:26:64.94:519,65,0	1/1:6,14:20:8.99:269,9,0	1/1:8,21:30:49.96:400,50,0	0/0:15,0:15:42.08:0,42,433	1/1:3,19:22:50.93:419,51,0	1/1:6,20:26:59.92:491,60,0	1/1:3,11:14:23.83:197,24,0	1/1:5,7:12:17.97:147,18,0	1/1:11,16:27:9.83:279,10,0	1/1:7,17:24:46.92:367,47,0	1/1:12,0:12:14.26:38,14,0	1/1:15,8:23:17.94:148,18,0	1/1:3,18:21:35.92:290,36,0	1/1:5,9:14:17.97:148,18,0	0/0:20,0:20:2.95:0,3,8	0/0:19,0:19:9.72:0,10,28	0/0:4,0:4:3.70:0,4,12
chr10	21666586	.	GGGGA	G	1939.85	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=1.478;DP=527;FS=7.160;HRun=0;HaplotypeScore=129.9013;InbreedingCoeff=0.9852;MQ=74.53;MQ0=1;MQRankSum=-5.498;QD=27.71;ReadPosRankSum=0.427;VQSLOD=2.8055;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:51.09:0,51,968	0/0:13,0:13:36.03:0,36,436	0/0:19,0:16:45.03:0,45,669	0/0:15,0:12:31.92:0,32,403	1/1:1,20:21:59.77:859,60,0	0/0:18,0:18:36.04:0,36,477	0/0:27,0:27:48.08:0,48,654	0/0:20,0:19:51.60:0,52,450	0/0:20,0:20:57.16:0,57,699	0/0:17,0:17:40.45:0,40,500	0/0:11,0:11:24.55:0,25,324	0/0:25,0:25:65.78:0,66,785	0/0:22,0:21:51.10:0,51,673	0/0:28,0:28:60.12:0,60,715	0/0:15,0:15:45.15:0,45,1093	0/0:23,0:23:60.14:0,60,742	0/0:25,0:25:63.17:0,63,783	0/0:15,0:15:33.09:0,33,455	0/0:13,0:13:33.06:0,33,362	0/0:24,0:24:66.20:0,66,910	0/0:26,0:26:59.95:0,60,717	1/1:6,8:14:36:503,36,0	0/0:19,0:19:33.01:0,33,458	0/0:23,0:23:51.11:0,51,655	0/0:18,0:18:42.06:0,42,498	1/1:14,0:14:26.93:264,27,0	1/1:18,0:18:32.91:383,33,0	1/1:3,0:3:9.02:103,9,0
chr10	21666589	.	GAGGC	G	1784.66	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=3.386;DP=529;FS=18.306;HRun=0;HaplotypeScore=131.9933;InbreedingCoeff=0.9833;MQ=76.25;MQ0=1;MQRankSum=-6.179;QD=27.04;ReadPosRankSum=1.753;VQSLOD=2.4822;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:51.17:0,51,1189	0/0:12,0:13:36.08:0,36,616	0/0:20,0:16:45.12:0,45,871	0/0:16,0:13:24.18:0,24,476	1/1:21,0:21:47.78:500,48,0	0/0:19,0:19:39.12:0,39,752	0/0:26,0:26:48.16:0,48,979	0/0:22,0:21:58.72:0,59,933	0/0:18,0:22:63.22:0,63,1175	0/0:15,0:16:43.89:0,44,809	0/0:10,0:10:24.55:0,25,454	0/0:22,0:26:68.91:0,69,1214	0/0:20,0:21:51.17:0,51,953	0/0:27,0:29:66.23:0,66,1178	0/0:17,0:17:51.17:0,51,1256	0/0:23,0:23:63.22:0,63,1184	0/0:22,0:25:63.21:0,63,1159	0/0:16,0:16:36.12:0,36,713	0/0:15,0:15:42.03:0,42,678	0/0:21,0:22:66.23:0,66,1260	0/0:23,0:25:60.20:0,60,1102	1/1:12,0:12:18.29:236,18,0	0/0:16,0:18:36.04:0,36,663	0/0:24,0:24:54.19:0,54,1045	0/0:17,0:18:42.14:0,42,750	1/1:1,12:13:30.09:472,30,0	1/1:3,13:17:33.11:585,33,0	1/1:1,2:3:9.03:163,9,0
chr10	21667301	.	AAG	A	8269.37	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-2.476;DP=625;FS=15.175;HRun=0;HaplotypeScore=112.4027;InbreedingCoeff=0.9482;MQ=69.88;MQ0=2;MQRankSum=-3.725;QD=20.57;ReadPosRankSum=3.959;VQSLOD=4.5871;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:26:48.02:0,48,451	1/1:2,0:11:22.73:112,23,0	0/0:25,0:23:33.08:0,33,479	0/0:31,0:27:41.64:0,42,528	0/0:8,0:34:61.63:0,62,570	1/1:0,23:23:63.20:780,63,0	1/1:3,10:13:18.06:223,18,0	0/0:33,0:33:78.25:0,78,1225	1/1:4,10:14:27.04:317,27,0	1/1:2,20:22:66.16:788,66,0	1/1:4,22:26:63.10:743,63,0	1/1:9,18:27:45.14:557,45,0	1/1:7,23:29:57.18:706,57,0	1/1:3,17:20:4.32:547,4,0	1/1:7,11:18:45.13:546,45,0	1/1:6,0:34:59.32:294,59,0	1/1:4,0:30:48.27:238,48,0	1/1:7,10:18:2.82:352,3,0	1/1:8,0:19:28.27:146,28,0	1/1:3,1:18:33.32:188,33,0	1/1:4,0:15:25.80:136,26,0	0/0:0,0:11:29.89:0,30,274	1/1:5,11:16:30.09:371,30,0	1/1:8,17:25:45.14:557,45,0	1/1:1,22:23:54.17:669,54,0	0/0:4,0:21:51.02:0,51,453	0/0:8,0:30:45.01:0,45,398	0/0:0,0:11:33:0,33,290
chr10	21667344	.	A	AT	252.38	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=1.187;DP=596;FS=0.000;HRun=7;HaplotypeScore=97.0552;InbreedingCoeff=0.9861;MQ=78.00;MQ0=1;MQRankSum=-2.869;QD=21.03;ReadPosRankSum=0.624;VQSLOD=2.6646;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:78.12:0,78,753	0/0:6,0:6:18.03:0,18,174	0/0:19,0:19:50.73:0,51,466	0/0:20,0:20:38.01:0,38,355	0/0:33,0:32:90.14:0,90,869	0/0:22,0:22:48.05:0,48,457	0/0:13,0:13:30.03:0,30,284	0/0:45,1:45:71.88:0,72,964	0/0:19,0:19:54.09:0,54,521	0/0:27,0:27:75.11:0,75,724	0/0:20,0:20:51.06:0,51,487	0/0:14,0:14:33.05:0,33,319	0/0:24,0:24:54.08:0,54,521	0/0:21,0:21:45.05:0,45,429	1/1:1,11:12:30.06:347,30,0	0/0:31,0:31:90.15:0,90,869	0/0:19,0:19:39.06:0,39,377	0/0:13,0:13:21.03:0,21,203	0/0:22,0:22:48.06:0,48,459	0/0:17,0:17:51.08:0,51,492	0/0:18,0:18:42.05:0,42,399	0/0:16,0:16:39.05:0,39,371	0/0:23,0:23:66.11:0,66,637	0/0:21,0:21:53.19:0,53,513	0/0:18,0:18:36.03:0,36,341	0/0:26,0:26:66.09:0,66,632	0/0:33,0:33:87.14:0,87,840	0/0:14,0:14:33.05:0,33,319
chr10	21667896	.	TTTTTGTTTTGTTTTG	T	3498.02	PASS	AB=0.788;AC=23;AF=0.411;AN=56;BaseQRankSum=1.925;DP=645;FS=22.046;HRun=0;HaplotypeScore=405.0172;InbreedingCoeff=0.7416;MQ=59.08;MQ0=5;MQRankSum=0.116;QD=15.21;ReadPosRankSum=1.274;VQSLOD=0.7014;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:11,6:17:5.89:247,6,0	1/1:12,0:12:12.02:120,12,0	0/0:28,0:19:3.01:0,3,67	0/0:43,0:23:2.50:0,2,7	1/1:22,8:30:18.02:623,18,0	0/0:23,0:23:36.12:0,36,1261	0/0:20,0:20:30.73:0,31,919	0/0:36,0:36:33.01:0,33,558	0/0:17,0:17:30.10:0,30,1184	0/0:24,0:24:22.88:0,23,617	0/0:20,0:20:22.89:0,23,814	0/0:30,0:30:45.15:0,45,1602	0/0:41,0:41:63.84:0,64,2129	0/0:38,0:38:71.05:0,71,2484	0/0:28,0:28:60.25:0,60,725	1/1:30,0:30:28.08:354,28,0	1/1:15,0:15:6.11:86,6,0	0/0:10,0:8:7.84:0,8,247	1/1:28,0:27:4.78:110,5,0	1/1:11,0:11:18.15:207,18,0	1/1:15,0:15:2.45:80,2,0	1/1:18,6:24:12.04:494,12,0	0/0:24,0:24:40.95:0,41,1364	0/0:21,0:21:20.43:0,20,431	0/0:12,0:12:9.03:0,9,344	0/1:19,7:26:95.24:643,0,95	1/1:10,8:18:12.04:494,12,0	1/1:4,0:4:3.01:40,3,0
chr10	21667901	.	G	GTT	14247.37	PASS	AB=0.971;AC=40;AF=0.714;AN=56;BaseQRankSum=8.887;DP=599;FS=0.755;HRun=6;HaplotypeScore=198.1937;InbreedingCoeff=0.7646;MQ=55.42;MQ0=7;MQRankSum=-7.630;QD=31.80;ReadPosRankSum=1.134;VQSLOD=2.7391;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:29.90:0,30,334	1/1:9,1:10:29.86:298,30,0	0/0:26,0:17:48.10:0,48,602	0/0:41,0:21:49.51:0,50,581	0/0:27,0:27:62.19:0,62,724	1/1:19,2:21:60.16:813,60,0	1/1:17,2:19:51.15:716,51,0	0/1:30,2:30:49.06:853,0,49	1/1:16,0:16:48.14:625,48,0	1/1:21,0:21:54.12:782,54,0	1/1:19,2:21:60.15:867,60,0	1/1:25,2:27:74.24:973,74,0	1/1:35,1:36:98.51:1321,99,0	1/1:34,3:37:97.35:1278,97,0	1/1:29,0:29:87.23:1137,87,0	1/1:28,1:29:76.37:846,76,0	1/1:7,4:12:14.71:275,15,0	1/1:5,3:6:2.10:241,2,0	1/1:23,3:25:5.37:620,5,0	1/1:11,0:11:32.72:304,33,0	1/1:14,1:15:22.91:282,23,0	0/0:22,0:22:62.92:0,63,734	1/1:21,2:23:63.21:932,63,0	1/1:16,4:20:41.24:676,41,0	1/1:8,2:10:27.09:390,27,0	0/1:25,0:25:18.09:18,0,634	0/0:17,0:17:38.86:0,39,431	0/0:4,0:4:9.03:0,9,119
chr10	21667903	.	TTTG	T	17126.23	PASS	AB=0.937;AC=44;AF=0.786;AN=56;BaseQRankSum=12.124;DP=584;FS=6.825;HRun=0;HaplotypeScore=191.9495;InbreedingCoeff=0.4442;MQ=53.49;MQ0=7;MQRankSum=-8.256;QD=33.32;ReadPosRankSum=2.746;VQSLOD=4.7409;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:14,0:14:3.60:4,0,262	1/1:6,4:10:30.08:426,30,0	0/0:26,0:16:48.10:0,48,602	0/0:40,0:20:50.38:0,50,581	0/1:27,0:27:5.06:5,0,597	1/1:4,16:20:60.20:960,60,0	1/1:4,14:18:45.50:813,45,0	0/1:18,14:30:17.66:848,0,18	1/1:3,13:16:48.16:775,48,0	1/1:5,14:19:54.18:852,54,0	1/1:6,14:20:59.99:922,60,0	1/1:7,18:25:75.17:1144,75,0	1/1:7,28:35:99:1562,99,0	1/1:12,24:36:99:1542,99,0	1/1:4,25:29:87.28:1381,87,0	1/1:4,24:28:81.25:1275,81,0	1/1:7,4:11:12.33:358,12,0	1/1:6,2:7:5.93:253,6,0	1/1:10,15:24:23.23:763,23,0	1/1:2,9:11:33.10:528,33,0	1/1:5,9:14:22.08:399,22,0	0/1:22,0:22:4:4,0,599	1/1:3,20:23:63.22:1049,63,0	1/1:9,10:19:41.06:676,41,0	1/1:4,6:10:27.09:445,27,0	0/1:23,2:25:99:115,0,543	0/1:17,0:17:27.94:28,0,320	0/0:4,0:4:9.03:0,9,118
chr10	21667912	.	TTTTG	T	1223.92	PASS	AB=0.986;AC=22;AF=0.393;AN=56;BaseQRankSum=5.163;DP=571;FS=13.274;HRun=0;HaplotypeScore=249.5993;InbreedingCoeff=-0.5331;MQ=45.78;MQ0=10;MQRankSum=-8.487;QD=2.87;ReadPosRankSum=2.447;VQSLOD=1.2088;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:18,0:18:8.54:9,0,314	0/0:6,0:6:9.20:0,9,27	0/0:25,0:15:0.32:0,0,303	0/0:45,0:16:20.75:0,21,252	0/1:24,0:24:45.57:46,0,427	0/1:20,0:20:26.34:52,0,26	0/1:20,0:20:18.96:19,0,79	0/1:33,0:28:99:279,0,176	1/1:15,0:15:4.18:51,4,0	0/1:15,1:16:36.55:76,0,37	0/1:18,0:18:14.97:78,0,15	0/1:20,1:21:21.71:89,0,22	0/1:35,1:36:83.98:84,0,91	0/1:32,2:34:56.32:137,0,56	0/0:28,0:28:11.55:0,12,77	0/0:27,0:27:22.93:0,23,82	0/1:11,0:11:27.47:52,0,27	0/1:13,0:11:11.69:12,0,84	0/1:20,0:19:94.05:94,0,134	0/0:10,0:10:9.73:0,10,65	0/1:14,0:14:33.28:51,0,33	0/1:19,0:19:44.29:44,0,379	0/1:20,0:20:10.22:10,0,58	0/1:17,2:19:32.10:92,0,32	0/1:9,0:9:3.97:4,0,50	0/1:23,0:23:58.03:58,0,444	0/1:23,0:23:44.06:44,0,382	0/0:4,0:4:12.03:0,12,134
chr10	21667916	.	G	GT	6029.55	PASS	AB=0.962;AC=33;AF=0.589;AN=56;BaseQRankSum=2.687;DP=567;FS=20.528;HRun=4;HaplotypeScore=205.9096;InbreedingCoeff=0.6067;MQ=41.59;MQ0=10;MQRankSum=-7.917;QD=15.58;ReadPosRankSum=2.690;VQSLOD=2.5834;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:32.87:0,33,337	0/0:6,0:6:10.29:0,10,48	0/0:21,0:12:19.30:0,19,206	0/0:40,0:12:14.22:0,14,180	0/0:22,0:22:49.39:0,49,459	1/1:19,0:19:53.60:425,54,0	1/1:19,1:20:39.67:365,40,0	1/1:31,0:26:11.13:238,11,0	1/1:15,0:15:44.56:317,45,0	1/1:15,0:15:41.31:349,41,0	1/1:17,0:17:42.06:389,42,0	1/1:19,0:19:53.71:464,54,0	1/1:37,0:37:86.39:734,86,0	1/1:35,1:36:91.97:740,92,0	1/1:29,0:29:7.69:387,8,0	0/1:26,0:26:84.09:265,0,84	0/1:12,1:13:14.77:75,0,15	1/1:12,1:12:23.34:197,23,0	0/1:22,0:21:32.21:88,0,32	0/1:13,0:13:19.07:19,0,67	0/1:13,1:15:15.29:130,0,15	0/0:19,0:19:43.47:0,43,411	1/1:20,0:20:42.33:423,42,0	1/1:16,1:17:29.65:285,30,0	1/1:9,0:9:17.37:138,17,0	0/0:22,0:22:36.25:0,36,473	0/0:22,0:22:49.48:0,49,463	0/0:5,0:5:15.03:0,15,157
chr10	21667919	.	TTG	T	427.08	PASS	AB=0.970;AC=23;AF=0.411;AN=56;BaseQRankSum=1.410;DP=568;FS=8.021;HRun=0;HaplotypeScore=232.6372;InbreedingCoeff=0.4676;MQ=42.59;MQ0=9;MQRankSum=-4.119;QD=1.46;ReadPosRankSum=-2.358;VQSLOD=0.9305;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:4.25:0,4,446	0/0:6,0:6:11.13:0,11,70	0/0:18,0:10:21.53:0,22,305	0/0:43,0:13:23.73:0,24,310	0/0:21,0:21:8.54:0,9,448	1/1:19,0:19:5.93:36,6,0	1/1:22,1:23:9.35:112,9,0	0/1:27,2:24:6.88:7,0,187	1/1:16,0:16:7.23:32,7,0	1/1:13,3:16:15.44:108,15,0	1/1:16,0:16:4.53:29,5,0	0/1:18,0:18:1.04:14,0,1	1/1:36,2:38:4.50:53,4,0	1/1:37,0:37:15.71:87,16,0	0/0:30,0:30:28.69:0,29,83	0/0:26,0:26:41.08:0,41,159	0/1:12,0:12:15.11:15,0,101	1/1:15,1:14:2.07:51,2,0	0/0:23,0:22:38.12:0,38,265	0/0:13,0:13:24.06:0,24,147	0/0:15,0:15:23.48:0,23,135	0/0:20,0:20:12.81:0,13,585	0/1:20,1:21:7.46:27,0,7	0/0:13,0:13:0.45:0,0,8	1/1:8,0:8:1.33:10,1,0	0/1:23,1:24:26.41:26,0,625	0/0:21,0:21:6.97:0,7,498	0/0:5,0:5:15.05:0,15,220
chr10	21667921	.	G	GT	10868.54	PASS	AB=0.910;AC=35;AF=0.625;AN=56;BaseQRankSum=6.917;DP=579;FS=5.837;HRun=4;HaplotypeScore=190.8607;InbreedingCoeff=0.4568;MQ=41.36;MQ0=9;MQRankSum=-4.045;QD=24.53;ReadPosRankSum=6.319;VQSLOD=2.7520;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:41.76:0,42,422	0/1:6,0:6:13.41:68,0,13	0/0:19,0:10:24.07:0,24,269	0/1:40,0:12:28.44:28,0,87	0/0:23,0:23:40.53:0,41,363	1/1:2,18:20:57.16:760,57,0	1/1:8,15:23:56.97:705,57,0	0/1:18,11:24:99:322,0,166	1/1:0,16:16:48.16:640,48,0	1/1:6,10:17:48.03:566,48,0	1/1:1,15:16:45.15:596,45,0	1/1:2,17:19:54.14:713,54,0	1/1:6,32:38:99:1347,102,0	1/1:10,29:39:99:1382,108,0	1/1:6,23:29:80.83:941,81,0	1/1:18,9:27:32.17:555,32,0	0/1:12,0:12:58.77:59,0,71	1/1:8,8:14:8.06:450,8,0	0/1:20,3:22:99:120,0,101	0/1:12,1:13:31.89:154,0,32	0/1:12,3:15:21.54:139,0,22	0/0:19,0:19:55.51:0,56,544	1/1:5,17:22:57.12:714,57,0	1/1:7,8:15:29.97:364,30,0	1/1:1,6:7:18.06:243,18,0	0/0:24,1:25:23.82:0,24,541	0/0:24,0:24:58.46:0,58,543	0/0:5,0:5:15.04:0,15,169
chr10	21667922	.	TTTTG	T	6266.26	PASS	AB=0.996;AC=35;AF=0.625;AN=56;BaseQRankSum=12.848;DP=590;FS=48.314;HRun=0;HaplotypeScore=236.3501;InbreedingCoeff=-0.2215;MQ=42.76;MQ0=8;MQRankSum=-11.064;QD=11.48;ReadPosRankSum=10.399;VQSLOD=2.1400;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:1.53:0,2,439	1/1:2,4:6:17.26:259,17,0	0/0:17,0:9:24.07:0,24,269	0/1:41,0:12:18.83:19,0,108	0/1:23,0:23:57.16:57,0,320	0/1:20,0:20:10.03:152,0,10	0/1:22,0:22:24.24:144,0,24	0/1:33,0:28:99:110,0,230	1/1:16,0:16:5.60:62,6,0	0/1:18,0:18:85.35:198,0,85	1/1:17,0:17:0.75:181,1,0	0/1:19,0:19:10.66:130,0,11	0/1:38,0:38:21.76:265,0,22	0/1:38,0:38:43.19:164,0,43	1/1:30,0:30:87.29:1319,87,0	1/1:13,14:27:76.79:1112,77,0	1/1:10,3:13:10.94:281,11,0	0/1:15,1:14:45:45,0,139	1/1:19,5:23:28.47:372,28,0	1/1:7,7:14:36.39:485,36,0	1/1:11,4:15:30.28:348,30,0	0/1:20,0:20:35.18:35,0,482	0/1:24,0:24:60.39:222,0,60	0/1:15,0:15:26.24:164,0,26	1/1:7,0:7:10.46:59,10,0	0/1:26,0:26:48.59:49,0,531	0/1:24,0:24:35.04:35,0,484	0/0:5,0:5:15.04:0,15,170
chr10	21667931	.	G	GT	1625.92	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=2.528;DP=595;FS=18.491;HRun=4;HaplotypeScore=225.2154;InbreedingCoeff=0.8661;MQ=46.85;MQ0=6;MQRankSum=-5.197;QD=16.42;ReadPosRankSum=1.083;VQSLOD=0.9093;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:24:29.14:0,29,457	1/1:4,2:6:12.72:100,13,0	0/0:17,0:11:18:0,18,232	0/0:35,0:17:25.42:0,25,308	0/0:20,0:20:20.51:0,21,294	0/0:24,0:24:69.14:0,69,708	0/0:23,0:23:63.77:0,64,638	0/0:28,0:23:62.51:0,63,616	0/0:19,0:19:54.10:0,54,542	0/0:22,0:22:55.96:0,56,596	0/0:19,0:19:22.83:0,23,300	0/0:21,0:21:58.68:0,59,590	0/0:36,0:36:97.28:0,97,954	0/0:40,1:41:83.23:0,83,1137	0/0:32,0:32:55.26:0,55,416	1/1:23,6:29:34.37:375,34,0	1/1:6,8:14:31.71:374,32,0	0/0:17,1:17:14.99:0,15,474	1/1:8,10:16:39.33:460,39,0	1/1:8,5:13:23.12:229,23,0	1/1:9,5:14:22.32:245,22,0	0/0:21,0:21:43.46:0,43,399	0/0:21,0:21:55.84:0,56,511	0/0:16,0:16:5.39:0,5,317	0/0:13,0:13:27.05:0,27,273	0/0:20,0:20:35.25:0,35,498	0/0:26,0:26:52.50:0,52,512	0/1:5,0:5:31.19:31,0,59
chr10	21667942	.	TTTTG	T	15332.47	PASS	AB=1.000;AC=44;AF=0.786;AN=56;BaseQRankSum=7.601;DP=624;FS=5.147;HRun=0;HaplotypeScore=203.8633;InbreedingCoeff=0.5111;MQ=61.53;MQ0=4;MQRankSum=-6.031;QD=28.18;ReadPosRankSum=5.709;VQSLOD=3.9534;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:4.14:0,4,476	1/1:3,4:7:21.07:344,21,0	0/0:19,0:15:42.10:0,42,446	0/0:34,0:21:9.33:0,9,400	0/1:23,0:23:21.15:21,0,414	1/1:28,0:28:75.10:960,75,0	1/1:23,0:23:57.93:761,58,0	1/1:18,0:14:26.75:388,27,0	1/1:21,0:21:55.53:726,56,0	1/1:23,1:24:55.33:750,55,0	1/1:18,0:18:38.81:536,39,0	1/1:25,1:26:55.83:809,56,0	1/1:36,1:37:99:1294,101,0	1/1:45,2:47:99:1440,105,0	1/1:22,12:34:83.94:1268,84,0	1/1:14,14:28:81.27:1263,81,0	1/1:18,4:22:63.20:870,63,0	1/1:19,0:18:39.24:575,39,0	1/1:15,5:19:37.61:578,38,0	1/1:8,7:15:45.15:709,45,0	1/1:10,4:14:36.08:503,36,0	0/1:17,0:17:27.48:27,0,339	1/1:20,0:20:39.10:520,39,0	1/1:16,2:18:34.36:466,34,0	1/1:12,0:12:36.12:462,36,0	0/1:27,0:27:52.77:53,0,567	0/1:26,0:26:9.34:9,0,514	0/0:2,0:2:6.02:0,6,64
chr10	21667946	.	G	GT	14318.10	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=5.716;DP=645;FS=0.000;HRun=5;HaplotypeScore=170.9886;InbreedingCoeff=0.9723;MQ=63.81;MQ0=4;MQRankSum=-7.035;QD=30.86;ReadPosRankSum=1.859;VQSLOD=2.5265;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:41.70:0,42,546	1/1:4,3:7:21.02:217,21,0	0/0:21,0:17:42.10:0,42,446	0/0:34,0:21:9.37:0,9,400	0/0:23,0:23:59.68:0,60,565	1/1:0,28:28:75.24:985,75,0	1/1:2,21:23:60.19:782,60,0	1/1:5,14:15:36.12:472,36,0	1/1:1,21:22:57.18:746,57,0	1/1:3,21:24:60.18:762,60,0	1/1:3,16:19:42.14:548,42,0	1/1:6,22:28:63.20:824,63,0	1/1:5,34:39:99:1338,102,0	1/1:6,41:47:99:1485,114,0	1/1:12,18:30:84.27:1076,84,0	1/1:15,14:29:81.10:880,81,0	1/1:5,19:24:63.16:777,63,0	1/1:3,16:18:45.15:590,45,0	1/1:10,10:19:39.07:453,39,0	1/1:7,8:15:45.05:486,45,0	1/1:4,12:16:36.03:409,36,0	0/0:19,0:19:50.69:0,51,474	1/1:1,19:20:42.13:543,42,0	1/1:6,13:19:36.12:473,36,0	1/1:0,16:16:36.12:473,36,0	0/0:28,1:29:38.31:0,38,686	0/0:28,0:28:68.75:0,69,676	0/0:2,0:2:6.02:0,6,64
chr10	21669217	.	G	GAC	405.02	PASS	AB=0.880;AC=10;AF=0.179;AN=56;BaseQRankSum=4.938;DP=738;FS=32.859;HRun=0;HaplotypeScore=238.0738;InbreedingCoeff=0.0893;MQ=35.21;MQ0=1;MQRankSum=-5.673;QD=1.96;ReadPosRankSum=0.107;VQSLOD=1.4806;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:1.55:0,2,4	0/0:12,0:12:7.21:0,7,40	0/0:9,0:4:7.08:0,7,84	0/0:6,0:4:9.01:0,9,66	0/0:44,0:44:4.63:0,5,77	0/0:14,7:21:1.54:0,2,23	0/0:18,1:19:12.20:0,12,139	0/1:25,4:29:99:132,0,307	0/1:20,3:23:15.87:16,0,91	0/1:58,8:65:99:286,0,709	0/0:23,3:26:9.27:0,9,68	0/1:17,3:20:25.92:38,0,26	0/0:24,5:29:13.45:0,13,154	0/0:15,6:21:4.34:0,4,38	0/0:38,0:38:2.97:0,3,25	0/0:28,0:28:12.59:0,13,113	1/1:8,0:8:3.83:20,4,0	0/1:8,1:9:33.29:33,0,81	0/0:13,0:13:11.94:0,12,193	0/0:47,0:47:15.10:0,15,141	0/0:20,0:20:15.01:0,15,171	1/1:40,0:40:0.95:3,1,0	0/0:37,5:42:10.09:0,10,101	0/1:10,2:11:0:0,0,0	0/0:45,7:52:15.95:0,16,102	0/0:32,1:33:26.79:0,27,474	0/0:39,0:38:36.64:0,37,371	0/0:17,0:17:11.74:0,12,92
chr10	21670723	.	GTC	G	3207.73	PASS	AB=0.835;AC=26;AF=0.464;AN=56;BaseQRankSum=1.072;DP=676;FS=5.967;HRun=0;HaplotypeScore=257.4204;InbreedingCoeff=0.1002;MQ=47.36;MQ0=10;MQRankSum=-3.400;QD=7.05;ReadPosRankSum=-7.223;VQSLOD=1.4184;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:54.17:0,54,871	1/1:4,3:7:5.98:57,6,0	0/0:17,0:7:21.06:0,21,298	0/0:38,0:21:27.51:0,28,492	0/0:32,0:32:90.17:0,90,1318	0/1:25,9:34:99:264,0,122	0/1:20,4:24:18.42:18,0,72	1/1:29,7:35:38.53:458,39,0	0/1:23,7:30:99:135,0,150	0/1:25,10:35:99:495,0,133	0/1:15,13:28:60.01:127,0,60	0/1:31,5:36:99:107,0,199	0/1:23,3:26:84.64:203,0,85	0/1:8,5:13:33.11:85,0,33	1/1:27,3:29:17.83:155,18,0	0/1:14,8:22:14.94:150,0,15	1/1:12,1:13:13.88:173,14,0	0/1:14,0:14:32.99:144,0,33	1/1:14,3:16:30.15:422,30,0	1/1:21,11:32:8.36:231,8,0	1/1:15,2:17:7.71:72,8,0	0/0:15,0:14:39.13:0,39,670	0/1:19,1:20:50.22:50,0,86	0/1:19,2:21:51.74:52,0,67	0/0:14,3:17:26.17:0,26,104	0/0:38,0:38:99:0,103,1656	0/0:29,0:29:84.22:0,84,1340	0/0:15,0:15:45.08:0,45,613
chr10	21670725	.	C	CTG	13585.37	PASS	AB=0.951;AC=41;AF=0.732;AN=56;BaseQRankSum=4.449;DP=692;FS=6.259;HRun=0;HaplotypeScore=234.7961;InbreedingCoeff=0.9023;MQ=48.57;MQ0=10;MQRankSum=-6.074;QD=26.13;ReadPosRankSum=0.378;VQSLOD=4.7746;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:54.18:0,54,817	1/1:6,1:8:6.91:95,7,0	0/0:18,0:8:20.28:0,20,263	0/0:37,0:23:34.11:0,34,535	0/0:31,0:31:90.25:0,90,1302	1/1:13,20:33:65.07:1123,65,0	1/1:4,18:23:27.09:507,27,0	1/1:22,17:38:91.84:1552,92,0	1/1:13,19:32:52.56:1008,53,0	1/1:14,21:35:99:1766,102,0	1/1:15,12:27:27.68:558,28,0	1/1:10,27:37:90.27:1607,90,0	1/1:8,18:26:54.17:956,54,0	1/1:6,6:13:18.06:314,18,0	1/1:19,11:29:18.02:237,18,0	1/1:13,6:22:29.03:337,29,0	1/1:6,6:13:18.06:270,18,0	1/1:5,8:14:21.65:511,22,0	1/1:5,2:17:27.25:717,27,0	1/1:16,8:32:31.16:440,31,0	1/1:15,1:17:8.92:106,9,0	0/0:14,0:13:39.13:0,39,595	1/1:5,17:22:33.11:604,33,0	1/1:4,17:21:30.08:527,30,0	1/1:6,13:19:18.06:344,18,0	0/1:37,2:39:4.33:4,0,1401	0/0:32,0:32:90.11:0,90,1289	0/0:15,0:15:45.14:0,45,652
chr10	21670749	.	A	ATG	9752.19	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=1.688;DP=652;FS=10.655;HRun=0;HaplotypeScore=205.1492;InbreedingCoeff=0.9308;MQ=52.74;MQ0=10;MQRankSum=-6.593;QD=20.75;ReadPosRankSum=-1.728;VQSLOD=3.7097;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:48.15:0,48,610	1/1:2,4:6:9.03:136,9,0	0/0:25,0:15:32.87:0,33,355	0/0:24,0:15:29.12:0,29,358	0/0:23,0:23:60.18:0,60,749	1/1:7,26:33:33.10:522,33,0	1/1:10,8:18:6.01:142,6,0	1/1:13,33:44:64.14:1572,64,0	1/1:2,22:25:36.12:591,36,0	1/1:11,31:42:61.13:1517,61,0	1/1:6,25:32:25.36:439,25,0	1/1:7,29:36:60.19:966,60,0	1/1:5,21:26:45.15:739,45,0	1/1:2,15:17:15.05:247,15,0	1/1:15,11:25:18.05:269,18,0	1/1:1,19:20:26.12:403,26,0	1/1:3,10:13:12.04:200,12,0	1/1:6,5:11:11.53:226,12,0	1/1:5,7:10:27.09:429,27,0	1/1:6,26:33:34.18:510,34,0	1/1:5,7:12:5.67:98,6,0	0/0:11,0:11:24.08:0,24,305	1/1:7,17:24:18.06:296,18,0	1/1:7,12:18:12.04:201,12,0	1/1:1,18:19:15.05:248,15,0	0/0:32,1:33:37.09:0,37,998	0/0:31,0:31:81.06:0,81,985	0/0:16,0:16:45.10:0,45,541
chr10	21670858	.	ATATG	A	15035.10	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-1.661;DP=654;FS=3.815;HRun=0;HaplotypeScore=158.5575;InbreedingCoeff=0.9213;MQ=59.67;MQ0=1;MQRankSum=-3.989;QD=32.33;ReadPosRankSum=-0.861;VQSLOD=4.8554;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:35.15:0,35,581	1/1:0,0:21:42.12:497,42,0	0/0:12,0:10:4.23:0,4,83	0/0:10,0:5:2.16:0,2,98	0/0:42,0:42:96.21:0,96,1697	1/1:0,28:28:54.19:1071,54,0	1/1:0,10:10:15.05:289,15,0	1/1:0,0:40:99:1040,114,0	1/1:0,15:15:24.08:473,24,0	1/1:0,41:41:99:1682,112,0	1/1:0,24:24:48.16:921,48,0	1/1:0,31:31:63.22:1248,63,0	1/1:0,39:39:72.25:1413,72,0	1/1:0,19:19:36.12:711,36,0	1/1:0,0:19:33.10:398,33,0	1/1:0,0:19:36.11:433,36,0	1/1:0,0:10:8.91:74,9,0	1/1:0,12:12:27.09:531,27,0	1/1:1,0:8:17.91:146,18,0	1/1:0,0:41:90.22:1053,90,0	1/1:7,0:9:11.97:105,12,0	0/0:11,0:11:23.87:0,24,444	1/1:2,35:37:43.11:1171,43,0	1/1:0,14:14:30.10:595,30,0	1/1:1,27:28:60.21:1186,60,0	0/0:40,1:41:63.70:0,64,2089	0/0:35,0:35:87.24:0,87,1662	0/0:20,0:20:39.05:0,39,614
chr10	21670860	.	A	ATG	4452.53	PASS	AB=0.804;AC=12;AF=0.214;AN=56;BaseQRankSum=-14.664;DP=657;FS=1.904;HRun=0;HaplotypeScore=182.1238;InbreedingCoeff=0.7454;MQ=60.51;MQ0=1;MQRankSum=5.810;QD=24.07;ReadPosRankSum=4.180;VQSLOD=5.6462;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:20:28.10:366,28,0	0/0:21,0:21:34.62:0,35,163	0/1:14,0:11:6.54:17,0,7	0/0:10,0:5:8.46:0,8,64	1/1:10,31:42:50.60:1124,51,0	0/0:28,0:28:51.13:0,51,253	0/0:10,0:10:14.24:0,14,71	0/0:40,0:40:57.24:0,57,300	0/0:15,0:15:22.73:0,23,112	0/0:41,0:41:79.03:0,79,437	0/0:24,0:24:43.40:0,43,210	0/0:31,0:31:59.66:0,60,295	0/0:39,0:39:66.26:0,66,326	0/0:19,0:19:34.09:0,34,169	0/0:19,0:19:28.91:0,29,141	0/0:19,0:19:33.07:0,33,159	0/0:10,0:10:2.84:0,3,14	0/0:12,0:12:23.61:0,24,115	0/0:7,0:7:9.95:0,10,53	0/0:41,0:41:74.35:0,74,353	0/0:9,0:9:8.71:0,9,48	1/1:1,11:12:21.07:336,21,0	0/0:36,0:36:56.72:0,57,281	0/0:14,0:14:28.41:0,28,141	0/0:27,0:27:54.86:0,55,269	0/1:15,26:42:22.35:1064,0,22	1/1:5,32:36:42.32:1162,42,0	1/1:3,15:18:24.08:384,24,0
chr10	21671502	.	TTAA	T	5392.21	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=9.074;DP=604;FS=0.811;HRun=0;HaplotypeScore=102.5401;InbreedingCoeff=0.9936;MQ=76.63;MQ0=0;MQRankSum=-4.732;QD=43.84;ReadPosRankSum=1.797;VQSLOD=6.2264;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:72.25:0,72,1617	1/1:0,10:10:30.10:511,30,0	0/0:12,0:12:36.12:0,36,755	0/0:13,0:13:36.12:0,36,775	0/0:29,0:29:84.29:0,84,1912	0/0:16,0:16:45.15:0,45,1019	0/0:21,0:21:63.22:0,63,1452	0/0:25,0:25:75.26:0,75,1726	0/0:19,0:19:54.19:0,54,1224	0/0:35,0:35:99:0,102,2268	0/0:26,0:26:78.27:0,78,1763	0/0:36,0:36:99:0,108,2487	0/0:32,0:32:93.31:0,93,2064	0/0:22,0:22:63.22:0,63,1452	0/0:17,0:17:45.15:0,45,1038	1/1:0,27:27:69.24:1176,69,0	1/1:1,15:16:38.76:665,39,0	0/0:17,0:17:48.16:0,48,1088	1/1:1,12:13:36.10:584,36,0	1/1:1,26:27:75.26:1279,75,0	1/1:2,28:30:69.24:1177,69,0	0/0:20,0:20:60.21:0,60,1384	0/0:25,0:25:75.24:0,75,1638	0/0:25,0:25:72.23:0,72,1616	0/0:14,0:14:42.14:0,42,969	0/0:23,0:23:63.22:0,63,1437	0/0:22,0:22:66.23:0,66,1521	0/0:6,0:6:12.04:0,12,277
chr10	21672084	.	T	TTAA	2202.56	PASS	AB=0.553;AC=15;AF=0.268;AN=56;BaseQRankSum=15.083;DP=704;FS=0.292;HRun=0;HaplotypeScore=137.8628;InbreedingCoeff=-0.0544;MQ=72.77;MQ0=1;MQRankSum=-0.927;QD=6.37;ReadPosRankSum=1.991;VQSLOD=2.5881;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:39:99:0,117,2057	0/0:0,0:15:42.56:0,43,488	0/0:11,0:11:23.08:0,23,289	0/0:14,0:15:16.26:0,16,238	0/0:34,0:35:99:0,99,1673	0/1:4,0:20:49.90:90,0,50	0/1:2,0:25:8.11:193,0,8	0/1:13,1:40:99:659,0,178	0/1:4,0:23:61.76:62,0,72	0/1:6,0:30:98.50:99,0,98	0/1:5,0:31:49.65:226,0,50	0/1:8,0:33:78:189,0,78	0/1:4,0:18:89.19:105,0,89	0/1:6,0:41:48.89:302,0,49	0/0:7,0:26:53.04:0,53,403	0/0:3,0:20:54.13:0,54,616	0/0:2,0:27:69.18:0,69,799	1/1:0,0:9:0.34:73,0,0	0/0:2,0:16:48.13:0,48,554	0/0:2,0:30:84.62:0,85,974	0/0:1,0:24:66.19:0,66,780	0/0:22,0:23:60.06:0,60,994	0/1:7,0:39:91.57:221,0,92	0/1:2,0:13:23.91:43,0,24	1/1:0,0:23:14.28:102,14,0	0/0:35,0:36:99:0,105,1758	0/0:22,0:24:69.12:0,69,1141	0/0:15,0:17:48.15:0,48,829
chr10	21672780	.	CT	C	2662.08	PASS	AB=0.846;AC=13;AF=0.232;AN=56;BaseQRankSum=10.568;DP=618;FS=0.392;HRun=9;HaplotypeScore=65.0147;InbreedingCoeff=0.8967;MQ=73.46;MQ0=0;MQRankSum=-1.055;QD=20.17;ReadPosRankSum=-0.014;VQSLOD=4.0414;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:2,0:25:59.57:0,60,300	1/1:1,7:8:21.01:191,21,0	0/0:16,0:16:45.34:0,45,461	0/0:13,0:13:23.51:0,24,226	0/0:35,0:35:99:0,99,1134	0/0:28,0:28:78.20:0,78,886	0/0:17,1:18:23.68:0,24,526	0/0:33,0:33:78.21:0,78,876	0/0:23,0:23:60.18:0,60,692	0/0:31,0:31:78.23:0,78,900	0/0:17,0:17:45.10:0,45,497	0/0:14,0:14:42.12:0,42,485	0/0:23,0:23:63.19:0,63,727	0/0:16,0:16:39.10:0,39,433	0/0:31,0:31:84.25:0,84,969	1/1:4,21:25:54.02:494,54,0	1/1:2,25:27:69.03:632,69,0	0/1:9,2:11:24.85:25,0,247	1/1:1,17:18:51.03:467,51,0	1/1:3,34:37:96.02:879,96,0	1/1:0,6:6:18.01:165,18,0	0/0:21,0:21:60.18:0,60,692	0/0:20,0:21:59.99:0,60,662	0/0:13,0:13:30.09:0,30,346	0/0:32,0:32:90.27:0,90,1039	0/0:31,0:31:78.23:0,78,900	0/0:23,0:23:66.18:0,66,749	0/0:22,0:22:57.17:0,57,655
chr10	21673509	.	CA	C	5080.03	PASS	AB=0.987;AC=46;AF=0.821;AN=56;BaseQRankSum=7.229;DP=687;FS=1.840;HRun=1;HaplotypeScore=129.5273;InbreedingCoeff=-0.2105;MQ=89.31;MQ0=0;MQRankSum=-4.262;QD=7.39;ReadPosRankSum=10.867;VQSLOD=0.8269;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:37,0:37:61.18:331,61,0	0/1:16,0:16:8.52:92,0,9	0/1:25,0:25:20.39:20,0,170	0/1:26,0:26:60.84:61,0,112	1/1:15,0:15:15.82:103,16,0	1/1:28,0:28:45.61:234,46,0	0/1:24,0:24:39.50:130,0,39	0/1:19,2:21:6.86:132,0,7	1/1:21,0:21:3.29:130,3,0	1/1:30,0:30:13.28:157,13,0	1/1:24,1:25:54.71:252,55,0	1/1:28,0:28:69.50:281,70,0	0/1:25,0:25:11.45:208,0,11	1/1:27,0:27:13.17:186,13,0	1/1:26,0:26:59.40:236,59,0	1/1:29,0:29:44.54:232,45,0	1/1:34,0:34:43.18:306,43,0	1/1:20,0:20:29.48:165,29,0	0/1:19,0:19:6.10:84,0,6	0/1:19,0:19:13.49:148,0,13	1/1:35,0:35:66.69:328,67,0	1/1:20,1:21:50.52:201,51,0	0/1:22,1:23:18.92:147,0,19	1/1:26,0:26:44.87:247,45,0	1/1:21,0:21:50.98:200,51,0	1/1:33,0:33:41.95:205,42,0	1/1:23,0:23:49.89:210,50,0	0/1:10,0:10:20.99:55,0,21
chr10	21674665	.	AAG	A	3691.83	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=10.661;DP=538;FS=1.424;HRun=0;HaplotypeScore=64.7471;InbreedingCoeff=0.9978;MQ=85.15;MQ0=0;MQRankSum=-0.382;QD=39.27;ReadPosRankSum=-0.124;VQSLOD=5.1422;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:54.11:0,54,926	1/1:0,8:8:18.06:258,18,0	0/0:17,0:17:48.15:0,48,838	0/0:19,0:19:51.17:0,51,881	0/0:29,0:29:84.29:0,84,1539	0/0:28,0:28:84.29:0,84,1540	0/0:17,0:17:51.17:0,51,934	0/0:39,0:39:99:0,108,1980	0/0:14,0:14:42.14:0,42,770	0/0:25,0:25:69.18:0,69,1175	0/0:21,0:21:60.21:0,60,1083	0/0:14,0:14:42.14:0,42,770	0/0:24,0:24:69.24:0,69,1251	0/0:12,0:12:36.12:0,36,660	0/0:21,0:21:63.22:0,63,1155	1/1:0,22:22:54.18:774,54,0	1/1:0,18:18:54.18:773,54,0	0/0:22,0:22:60.19:0,60,1040	1/1:0,16:16:48.16:685,48,0	1/1:0,21:21:60.20:858,60,0	1/1:0,9:9:24.08:344,24,0	0/0:15,0:15:42.14:0,42,770	0/0:18,0:18:51.17:0,51,921	0/0:10,0:10:30.09:0,30,519	0/0:12,0:12:36.12:0,36,660	0/0:14,0:14:39.13:0,39,715	0/0:32,0:32:96.31:0,96,1720	0/0:21,0:21:63.21:0,63,1110
chr10	21674967	.	CTT	C	13436.97	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-15.933;DP=661;FS=0.000;HRun=10;HaplotypeScore=103.6465;InbreedingCoeff=0.9959;MQ=74.58;MQ0=4;MQRankSum=-1.273;QD=27.15;ReadPosRankSum=3.207;VQSLOD=4.8300;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,18:22:51.10:569,51,0	0/0:1,0:16:32.44:0,32,112	0/0:16,0:16:21.02:0,21,250	0/0:12,0:12:21.98:0,22,241	1/1:5,28:33:78.19:870,78,0	1/1:2,27:29:75.20:836,75,0	1/1:1,18:19:42.11:468,42,0	1/1:5,24:29:69.14:758,69,0	1/1:3,18:21:51.13:569,51,0	1/1:3,26:29:78.21:869,78,0	1/1:1,17:18:51.14:569,51,0	1/1:1,25:26:69.18:769,69,0	1/1:4,25:29:66.16:736,66,0	1/1:2,33:35:90.23:1003,90,0	1/1:1,21:23:62.90:681,63,0	0/0:3,0:18:32.44:0,32,112	0/0:2,0:28:54.90:0,55,189	1/1:2,22:23:54.14:602,54,0	0/0:6,0:27:52.40:0,52,180	0/0:5,1:24:14.95:0,15,132	0/0:3,0:25:58.39:0,58,229	1/1:3,19:21:51.13:569,51,0	1/1:3,19:22:57.14:635,57,0	1/1:1,19:20:51.13:569,51,0	1/1:4,20:25:48.05:593,48,0	1/1:0,22:22:66.18:736,66,0	1/1:1,22:22:57.15:635,57,0	1/1:6,18:23:36.09:401,36,0
chr10	21675125	.	G	GTT	23325.40	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-20.894;DP=755;FS=11.002;HRun=1;HaplotypeScore=140.7665;InbreedingCoeff=0.9987;MQ=84.45;MQ0=0;MQRankSum=-3.210;QD=51.49;ReadPosRankSum=3.748;VQSLOD=3.6159;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:70,0:70:99:0,205,3005	0/0:10,0:10:30.10:0,30,459	0/0:21,0:21:63.17:0,63,864	0/0:26,0:26:69.07:0,69,920	1/1:2,26:28:78.27:1484,78,0	1/1:1,21:22:54.19:1043,54,0	1/1:1,27:28:72.20:1353,72,0	1/1:1,32:34:99:1754,102,0	1/1:1,24:25:72.25:1388,72,0	1/1:3,25:29:34.70:1361,35,0	1/1:2,15:19:51.13:939,51,0	1/1:1,33:34:96.33:1854,96,0	1/1:0,28:28:69.24:1333,69,0	1/1:3,44:47:99:2304,112,0	0/0:34,0:34:99:0,102,1560	0/0:22,0:22:62.77:0,63,887	0/0:37,0:37:99:0,108,1628	1/1:0,33:33:90.31:1738,90,0	0/0:17,0:17:45.14:0,45,662	0/0:30,0:30:90.30:0,90,1362	0/0:35,0:35:99:0,105,1543	1/1:0,13:14:39.13:749,39,0	1/1:1,15:16:48.16:906,48,0	1/1:1,29:30:72.25:1391,72,0	1/1:1,20:21:63.22:1213,63,0	1/1:0,15:15:45.13:834,45,0	1/1:0,24:24:69.24:1332,69,0	1/1:0,6:6:18.06:348,18,0
chr10	21675639	.	A	AT	4740.58	PASS	AB=0.824;AC=16;AF=0.286;AN=56;BaseQRankSum=6.491;DP=651;FS=0.345;HRun=9;HaplotypeScore=91.5964;InbreedingCoeff=0.8468;MQ=75.56;MQ0=1;MQRankSum=-1.044;QD=22.57;ReadPosRankSum=1.590;VQSLOD=5.2827;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,105,911	0/1:5,6:11:3.83:148,0,4	0/0:14,1:15:10.76:0,11,144	0/1:9,0:9:12.47:12,0,82	0/0:31,0:32:85.88:0,86,716	0/0:19,0:19:47.95:0,48,410	0/0:16,0:16:44.99:0,45,391	0/0:32,0:32:83.93:0,84,719	0/0:19,0:19:50.96:0,51,435	0/0:31,0:31:80.92:0,81,697	0/0:19,3:22:21:0,21,409	0/0:21,0:21:50.96:0,51,439	0/0:27,0:27:71.97:0,72,625	0/0:20,0:20:50.97:0,51,439	1/1:3,22:26:37.12:636,37,0	1/1:6,26:32:63:697,63,0	1/1:4,29:33:52.16:804,52,0	1/1:1,23:24:60.16:664,60,0	1/1:3,16:19:25.07:484,25,0	1/1:5,23:29:59.96:632,60,0	1/1:6,21:26:60.16:664,60,0	0/0:20,0:21:50.90:0,51,424	0/0:18,0:18:35.97:0,36,312	0/0:19,0:20:47.02:0,47,397	0/0:31,0:31:80.83:0,81,682	0/0:25,0:25:59.97:0,60,521	0/0:24,0:24:65.94:0,66,563	0/0:5,0:5:15:0,15,130
chr10	21676019	.	C	CG	681.26	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-3.887;DP=726;FS=0.000;HRun=4;HaplotypeScore=121.9826;InbreedingCoeff=0.9985;MQ=90.32;MQ0=0;MQRankSum=-0.653;QD=30.97;ReadPosRankSum=-0.134;VQSLOD=2.3209;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,105,1180	0/0:14,0:14:42.09:0,42,463	0/0:35,0:35:96.23:0,96,1058	0/0:29,0:29:47.94:0,48,644	0/0:21,0:21:60.14:0,60,661	0/0:15,0:15:42.11:0,42,468	0/0:26,0:26:66.17:0,66,736	0/0:27,0:27:66.03:0,66,707	0/0:18,0:18:51.14:0,51,567	0/0:24,0:24:66.12:0,66,714	0/0:14,0:14:39.11:0,39,438	0/0:44,0:44:99:0,117,1325	0/0:32,0:32:81.22:0,81,908	0/0:25,0:25:72.16:0,72,802	1/1:2,20:22:57.19:776,57,0	0/0:39,0:39:99:0,102,1156	0/0:38,0:38:99:0,114,1245	0/0:22,0:22:60.15:0,60,670	0/0:18,0:18:42.08:0,42,443	0/0:38,0:38:99:0,105,1175	0/0:37,0:37:99:0,102,1138	0/0:17,0:17:51.15:0,51,577	0/0:12,0:12:33.09:0,33,372	0/0:16,0:16:39.11:0,39,442	0/0:21,0:21:57.15:0,57,638	0/0:44,0:44:99:0,120,1361	0/0:27,0:27:74.80:0,75,844	0/0:10,0:10:27.08:0,27,306
chr10	21676046	.	C	CGCA	16168.09	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-12.963;DP=801;FS=22.386;HRun=0;HaplotypeScore=120.2439;InbreedingCoeff=0.9984;MQ=93.60;MQ0=0;MQRankSum=-3.474;QD=45.93;ReadPosRankSum=3.183;VQSLOD=4.8538;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,38:48:96.33:2114,96,0	0/0:15,0:15:45.15:0,45,716	0/0:34,0:34:87.30:0,87,1384	0/0:38,0:38:93.79:0,94,1457	0/0:27,0:27:69.23:0,69,1095	1/1:4,13:18:36.12:793,36,0	1/1:5,21:28:51.17:1124,51,0	1/1:8,18:27:60.19:1249,60,0	1/1:4,18:25:50.81:1124,51,0	1/1:5,24:33:87.25:1710,87,0	1/1:4,10:15:24.08:529,24,0	1/1:2,36:40:99:2236,102,0	1/1:3,28:33:75.26:1650,75,0	1/1:2,23:29:66.23:1455,66,0	0/0:26,0:26:75.24:0,75,1174	0/0:41,0:41:99:0,117,1841	0/0:45,0:44:99:0,123,1970	0/0:22,0:22:63.21:0,63,1012	0/0:22,0:22:51.17:0,51,802	0/0:39,0:39:96.32:0,96,1520	0/0:37,0:37:99:0,102,1632	0/0:17,0:17:45.11:0,45,695	1/1:4,8:12:18.06:396,18,0	1/1:2,16:18:32.92:728,33,0	1/1:8,17:26:48.16:1059,48,0	0/0:44,0:44:99:0,129,2073	0/0:33,0:33:78.23:0,78,1197	0/0:9,0:9:27.09:0,27,434
chr10	21680171	.	TGAGAGAGG	T	6104.93	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=2.811;DP=667;FS=2.678;HRun=0;HaplotypeScore=212.3040;InbreedingCoeff=0.9744;MQ=73.09;MQ0=1;MQRankSum=-12.841;QD=51.30;ReadPosRankSum=1.262;VQSLOD=4.3575;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:75.24:0,75,2682	1/1:1,8:9:24.08:654,24,0	0/0:22,0:22:54.18:0,54,1913	0/0:13,0:10:26.70:0,27,1013	0/0:25,0:25:75.26:0,75,3244	0/0:31,0:31:78.25:0,78,3186	0/0:21,0:21:51.18:0,51,2070	0/0:37,0:37:90.30:0,90,3483	0/0:26,0:26:72.25:0,72,3038	0/0:30,0:30:75.26:0,75,3198	0/0:14,0:14:39.13:0,39,1688	0/0:36,0:36:99:0,105,4223	0/0:22,0:22:48.16:0,48,1882	0/0:22,0:22:42.14:0,42,1810	0/0:38,0:37:99:0,108,4352	1/1:8,20:28:51.17:1391,51,0	1/1:3,15:18:36.12:982,36,0	1/1:4,5:9:12.02:327,12,0	1/1:2,19:21:54.15:1329,54,0	1/1:4,20:24:48.16:1263,48,0	1/1:5,5:10:6.02:158,6,0	0/0:26,0:26:72.25:0,72,3006	0/0:28,0:28:84.29:0,84,3447	0/0:21,0:21:51.13:0,51,2097	0/0:30,0:30:75.26:0,75,3248	0/0:28,0:28:75.25:0,75,2993	0/0:36,0:36:90.31:0,90,3636	0/0:13,0:13:39.13:0,39,1682
chr10	21680199	.	A	AT	6622.08	PASS	AB=0.821;AC=25;AF=0.446;AN=56;BaseQRankSum=-9.397;DP=645;FS=1.441;HRun=10;HaplotypeScore=115.5844;InbreedingCoeff=0.8791;MQ=73.84;MQ0=1;MQRankSum=3.410;QD=20.31;ReadPosRankSum=0.067;VQSLOD=4.1901;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:53.92:0,54,443	0/0:11,0:11:29.95:0,30,246	0/0:23,0:23:19.14:0,19,270	0/0:22,0:18:1.77:0,2,192	0/0:29,0:30:67.94:0,68,548	1/1:4,24:29:62.99:654,63,0	1/1:5,13:19:29.91:302,30,0	1/1:10,32:45:52.47:913,52,0	1/1:6,17:23:45.11:478,45,0	1/1:7,15:22:39.09:409,39,0	1/1:4,12:16:42.10:441,42,0	1/1:4,28:32:56.68:856,57,0	1/1:6,21:27:5.29:464,5,0	1/1:4,18:22:45.11:475,45,0	0/0:30,0:30:80.89:0,81,665	0/0:24,0:24:50.51:0,51,417	0/0:17,0:17:29.90:0,30,240	0/0:11,0:11:23.96:0,24,196	0/0:25,0:26:61.91:0,62,497	0/0:23,0:23:56.89:0,57,462	0/0:10,0:10:17.94:0,18,144	0/0:25,0:26:61.92:0,62,498	1/1:5,19:24:32.50:551,32,0	1/1:2,11:14:29.91:302,30,0	1/1:3,27:30:44.53:679,45,0	0/1:18,5:23:97:97,0,331	0/0:28,2:30:19.93:0,20,576	0/0:13,0:13:32.93:0,33,271
chr10	21680746	.	A	AT	2942.86	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-4.238;DP=537;FS=1.318;HRun=10;HaplotypeScore=73.9682;InbreedingCoeff=0.9515;MQ=72.56;MQ0=0;MQRankSum=0.619;QD=23.54;ReadPosRankSum=-0.489;VQSLOD=4.1464;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:39:99:0,106,843	1/1:0,10:11:29.91:302,30,0	0/0:11,0:8:11.96:0,12,96	0/0:13,0:13:10.93:0,11,81	0/0:23,0:23:56.92:0,57,468	0/0:30,0:30:89.88:0,90,736	0/0:15,0:15:29.96:0,30,246	0/0:27,0:27:62.89:0,63,516	0/0:15,0:15:44.94:0,45,369	0/0:25,0:25:71.92:0,72,591	0/0:19,0:19:53.93:0,54,442	0/0:14,0:14:38.95:0,39,320	0/0:18,0:18:41.92:0,42,345	0/0:23,0:24:58.93:0,59,471	0/0:17,0:17:29.94:0,30,246	1/1:4,16:20:42.11:448,42,0	1/1:4,22:27:38.51:610,39,0	1/1:1,15:16:42.11:448,42,0	1/1:4,17:21:29.50:499,30,0	1/1:2,22:25:65.96:673,66,0	1/1:0,5:5:15.04:160,15,0	0/0:10,0:10:26.96:0,27,222	0/0:31,0:31:47.73:0,48,540	0/0:13,0:13:26.97:0,27,222	0/0:18,0:18:38.94:0,39,320	0/0:19,1:20:18.92:0,19,357	0/0:23,0:27:62.06:0,62,463	0/0:2,0:2:3:0,3,25
chr10	21680810	.	C	CT	8923.32	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-6.374;DP=546;FS=3.805;HRun=2;HaplotypeScore=123.1298;InbreedingCoeff=0.9657;MQ=89.07;MQ0=0;MQRankSum=-2.610;QD=37.97;ReadPosRankSum=1.835;VQSLOD=4.4602;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,123,1522	0/0:9,0:9:27.08:0,27,334	0/0:21,0:21:58.94:0,59,697	0/0:19,0:19:48.12:0,48,573	0/0:19,0:19:54.17:0,54,668	1/1:5,22:27:63.21:907,63,0	1/1:0,13:13:36.12:518,36,0	1/1:1,31:32:93.29:1302,93,0	1/1:1,16:17:45.15:648,45,0	1/1:1,20:21:54.16:758,54,0	1/1:0,10:10:30.10:431,30,0	1/1:0,15:15:45.15:648,45,0	1/1:1,15:16:39.13:561,39,0	1/1:0,18:18:48.16:691,48,0	0/0:25,0:25:72.23:0,72,893	0/0:21,0:21:60.16:0,60,716	0/0:22,0:22:63.12:0,63,725	0/0:15,0:15:45.10:0,45,529	0/0:20,0:20:60.15:0,60,725	0/0:22,0:22:63.18:0,63,767	0/0:14,0:14:42.12:0,42,507	0/0:11,0:11:30.09:0,30,371	1/1:0,19:19:54.18:777,54,0	1/1:1,16:17:36.12:518,36,0	1/1:0,30:30:81.27:1164,81,0	0/0:19,1:20:8.06:0,8,552	0/0:30,0:30:90.28:0,90,1115	0/0:1,0:1:3.01:0,3,37
chr10	21681193	.	C	CGAGCTTT	39096.80	PASS	AC=34;AF=0.630;AN=54;BaseQRankSum=6.120;DP=689;FS=33.719;HRun=0;HaplotypeScore=184.4901;InbreedingCoeff=0.9998;MQ=77.96;MQ0=0;MQRankSum=-19.500;QD=86.69;ReadPosRankSum=-1.733;VQSLOD=3.3845;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,37:49:99:4436,120,0	0/0:14,0:14:30.10:0,30,755	0/0:24,0:24:66.13:0,66,1423	0/0:22,0:22:53.72:0,54,1297	1/1:7,10:17:39.09:1374,39,0	1/1:7,10:18:48.12:1630,48,0	1/1:13,11:25:57.15:2024,57,0	1/1:18,8:29:81.24:2687,81,0	1/1:9,20:30:84.16:2894,84,0	1/1:4,13:17:48.14:1753,48,0	1/1:6,11:19:45.02:1339,45,0	1/1:10,22:36:87.20:3162,87,0	1/1:9,21:32:90.27:3244,90,0	1/1:14,16:31:69.15:2399,69,0	0/0:27,0:27:72.18:0,72,1631	0/0:27,0:27:81.28:0,81,1967	0/0:27,0:27:78.24:0,78,1909	0/0:23,0:22:69.24:0,69,1736	0/0:19,0:19:51.13:0,51,1171	0/0:19,0:19:54.09:0,54,1197	0/0:36,0:36:99:0,108,2522	1/1:7,8:16:39.05:1239,39,0	1/1:6,15:22:51.08:1793,51,0	1/1:6,12:21:30.05:1024,30,0	1/1:12,19:33:84.07:2741,84,0	1/1:9,18:27:72.25:2709,72,0	1/1:9,17:29:72.19:2649,72,0	./.
chr10	21681970	.	G	GT	4556.56	PASS	AB=0.924;AC=44;AF=0.786;AN=56;BaseQRankSum=2.658;DP=446;FS=0.000;HRun=8;HaplotypeScore=67.0322;InbreedingCoeff=0.3317;MQ=79.96;MQ0=1;MQRankSum=-2.737;QD=11.48;ReadPosRankSum=5.640;VQSLOD=3.3411;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:12,0:12:30.09:142,30,0	1/1:0,7:7:18.05:208,18,0	0/0:18,0:14:7:0,7,48	0/0:13,0:10:17.49:0,17,138	1/1:31,0:31:29.35:245,29,0	1/1:14,0:14:9.82:104,10,0	1/1:12,0:12:2.76:73,3,0	1/1:25,0:25:20.20:157,20,0	1/1:9,0:9:21.82:99,22,0	0/1:22,0:22:16.38:118,0,16	0/1:18,0:18:7:92,0,7	0/1:11,0:11:28.62:34,0,29	1/1:22,0:22:6.92:159,7,0	1/1:22,0:22:53.25:223,53,0	0/0:18,0:18:45:0,45,404	1/1:3,8:11:21.06:242,21,0	0/1:3,16:19:2.33:391,0,2	1/1:3,13:16:27.08:311,27,0	1/1:6,9:15:27.06:300,27,0	1/1:4,25:29:75.09:820,75,0	1/1:0,2:2:3.01:35,3,0	1/1:10,0:10:19.06:83,19,0	1/1:20,0:20:6.37:141,6,0	1/1:7,0:7:16.22:70,16,0	1/1:19,0:19:25.14:162,25,0	0/1:17,0:17:6.02:91,0,6	0/1:17,0:17:2.13:122,0,2	1/1:10,0:10:27.43:135,27,0
chr10	21681978	.	T	TA	9521.65	PASS	AB=1.000;AC=47;AF=0.839;AN=56;BaseQRankSum=-5.994;DP=443;FS=0.622;HRun=6;HaplotypeScore=51.7876;InbreedingCoeff=0.3830;MQ=81.38;MQ0=1;MQRankSum=-2.097;QD=23.05;ReadPosRankSum=5.704;VQSLOD=3.8102;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,14:14:33.10:408,33,0	0/1:7,0:7:2.23:30,0,2	0/1:18,0:14:3.88:4,0,89	0/0:14,0:11:11.84:0,12,102	1/1:5,28:33:81.17:982,81,0	1/1:1,12:13:33.10:408,33,0	1/1:2,12:14:27.08:334,27,0	1/1:2,24:26:72.12:788,72,0	1/1:0,8:8:24.08:297,24,0	1/1:3,19:22:57.17:694,57,0	1/1:2,18:20:47.94:522,48,0	1/1:2,8:10:15.05:186,15,0	1/1:2,19:21:51.16:628,51,0	1/1:0,23:23:60.19:743,60,0	0/0:16,0:16:45.07:0,45,446	1/1:8,0:8:17.32:60,17,0	1/1:18,0:18:13.77:94,14,0	0/1:16,0:16:24.88:56,0,25	0/1:12,0:12:26.41:26,0,46	0/1:29,0:29:26.74:138,0,27	1/1:1,0:1:2.60:10,3,0	1/1:0,7:7:21.07:260,21,0	1/1:1,18:19:48.02:594,48,0	1/1:0,6:6:18.06:223,18,0	1/1:1,19:20:51.16:631,51,0	1/1:2,16:18:48.07:552,48,0	1/1:2,18:20:39.12:482,39,0	1/1:0,10:10:30.09:370,30,0
chr10	21682451	.	C	CCTGAA	10500.14	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-13.233;DP=717;FS=1.197;HRun=0;HaplotypeScore=146.0330;InbreedingCoeff=0.9866;MQ=89.84;MQ0=0;MQRankSum=-4.858;QD=70.47;ReadPosRankSum=0.995;VQSLOD=6.1978;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,123,2653	1/1:0,7:8:15.05:474,15,0	0/0:29,0:29:78.25:0,78,1589	0/0:28,0:28:77.76:0,78,1568	0/0:19,0:19:57.20:0,57,1223	0/0:22,0:22:66.22:0,66,1379	0/0:34,0:34:96.31:0,96,2023	0/0:30,0:30:84.28:0,84,1773	0/0:26,0:26:72.24:0,72,1511	0/0:28,0:28:81.24:0,81,1630	0/0:24,0:24:72.24:0,72,1526	0/0:36,0:36:99:0,105,2263	0/0:33,0:33:96.27:0,96,1929	0/0:29,0:29:87.26:0,87,1763	0/0:33,0:33:84.27:0,84,1771	1/1:7,19:28:57.16:1720,57,0	1/1:3,24:28:60.21:1903,60,0	1/1:1,16:19:42.14:1331,42,0	1/1:0,15:18:54.17:1558,54,0	1/1:1,24:26:69.24:2044,69,0	1/1:1,21:22:51.13:1470,51,0	0/0:18,0:18:48.14:0,48,962	0/0:27,0:27:81.27:0,81,1689	0/0:23,0:23:66.23:0,66,1402	0/0:25,0:25:75.23:0,75,1512	0/0:24,0:24:72.23:0,72,1500	0/0:35,0:35:99:0,102,2126	0/0:3,0:3:9.03:0,9,195
chr10	21683719	.	G	GA	4353.35	PASS	AB=0.606;AC=20;AF=0.357;AN=56;BaseQRankSum=-5.972;DP=719;FS=0.342;HRun=12;HaplotypeScore=113.6434;InbreedingCoeff=0.4816;MQ=78.49;MQ0=1;MQRankSum=-0.227;QD=12.84;ReadPosRankSum=-1.253;VQSLOD=4.0939;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,24:35:17.65:498,18,0	0/0:2,0:5:1.83:0,2,11	0/0:43,0:36:4.59:0,5,148	0/0:24,1:19:5.85:0,6,47	0/0:23,0:24:57.40:0,57,394	0/1:7,17:25:29.60:340,0,30	0/1:6,11:19:15.24:196,0,15	1/1:10,19:30:13.41:420,13,0	0/1:8,8:16:76.03:116,0,76	1/1:8,19:27:20.06:381,20,0	1/1:5,16:23:23.36:388,23,0	0/1:10,19:30:36.97:274,0,37	1/1:6,18:24:20.43:183,20,0	1/1:21,7:28:8.04:350,8,0	0/0:37,1:38:66.13:0,66,637	0/0:5,0:24:28.43:0,28,82	0/0:8,0:42:52.31:0,52,164	0/0:3,0:16:23.35:0,23,81	0/0:5,0:20:28.49:0,28,84	0/0:10,0:31:46.34:0,46,147	0/0:1,0:9:10.18:0,10,29	0/0:23,1:27:23.69:0,24,305	0/1:7,15:24:4.51:307,0,5	1/1:6,27:33:31.25:618,31,0	0/1:8,17:25:3.83:282,0,4	0/0:29,4:34:10.29:0,10,394	0/0:31,2:36:21.70:0,22,437	0/0:2,0:2:5.48:0,5,31
chr10	21685546	.	TGG	T	9484.39	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-4.615;DP=513;FS=5.128;HRun=11;HaplotypeScore=74.2394;InbreedingCoeff=0.9806;MQ=79.80;MQ0=2;MQRankSum=-0.839;QD=22.06;ReadPosRankSum=7.175;VQSLOD=4.0748;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:21.03:0,21,256	1/1:3,4:7:12.03:127,12,0	0/0:34,0:25:42.33:0,42,458	0/0:23,0:18:16.46:0,16,243	1/1:6,20:26:37.07:507,37,0	1/1:5,20:24:48.12:511,48,0	1/1:7,12:19:30.05:319,30,0	1/1:9,9:19:23.96:239,24,0	1/1:4,10:14:33.08:351,33,0	1/1:4,11:15:30.04:316,30,0	1/1:2,11:13:33.08:345,33,0	1/1:6,13:19:39.08:412,39,0	1/1:4,8:12:30.04:307,30,0	1/1:8,8:16:27.02:285,27,0	0/0:14,0:15:29.07:0,29,374	1/1:3,21:24:63.15:670,63,0	1/1:4,21:25:57.12:607,57,0	1/1:4,11:15:33.07:350,33,0	1/1:6,11:17:33.46:338,33,0	1/1:2,12:14:30.04:319,30,0	1/1:10,19:29:54.11:574,54,0	1/1:4,13:17:39.09:411,39,0	1/1:3,8:11:32.66:321,33,0	1/1:3,13:16:33.07:348,33,0	1/1:5,16:21:45.11:478,45,0	1/1:3,17:20:51.11:535,51,0	1/1:6,21:27:63.09:656,63,0	1/1:4,5:9:15.03:159,15,0
chr10	21685556	.	GGA	G	2518.81	PASS	AB=0.974;AC=34;AF=0.607;AN=56;BaseQRankSum=8.573;DP=484;FS=18.116;HRun=0;HaplotypeScore=92.5088;InbreedingCoeff=-0.0875;MQ=78.32;MQ0=2;MQRankSum=0.352;QD=6.20;ReadPosRankSum=12.796;VQSLOD=0.2157;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:26.69:0,27,277	0/1:6,0:6:12.99:40,0,13	0/0:33,0:23:42.31:0,42,466	0/0:23,0:17:12.94:0,13,273	0/1:24,1:25:37.71:127,0,38	0/1:22,0:21:6.25:95,0,6	0/1:17,0:17:62.81:63,0,84	0/1:17,0:17:23.61:24,0,146	1/1:12,1:13:7.84:154,8,0	0/1:15,0:15:8.75:9,0,107	1/1:13,1:14:5.48:114,5,0	0/1:15,1:16:4.39:100,0,4	1/1:10,1:11:6.18:158,6,0	0/1:10,2:12:19.49:109,0,19	0/0:11,0:11:31.65:0,32,360	1/1:24,1:25:12.11:235,12,0	0/1:25,0:25:15.81:145,0,16	1/1:12,1:13:6.05:100,6,0	0/1:16,0:16:55.98:75,0,56	0/1:18,0:18:36.05:36,0,91	0/1:23,1:24:28.48:178,0,28	1/1:14,0:14:32.05:140,32,0	1/1:12,0:12:13.35:117,13,0	1/1:14,1:15:6.45:131,6,0	0/1:23,1:24:74.39:142,0,74	0/1:18,1:19:8.02:116,0,8	1/1:25,2:27:2.27:217,2,0	1/1:5,1:6:13.05:66,13,0
chr10	21686497	.	TG	T	7048.03	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=12.513;DP=938;FS=16.957;HRun=2;HaplotypeScore=101.4255;InbreedingCoeff=0.9998;MQ=86.18;MQ0=0;MQRankSum=-1.734;QD=36.14;ReadPosRankSum=2.868;VQSLOD=3.2026;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,50:51:99:1870,144,0	0/0:12,0:12:30.10:0,30,450	0/0:34,0:34:99:0,99,1396	0/0:26,0:26:46.49:0,46,1005	1/1:0,31:31:84.27:1091,84,0	0/0:21,0:21:60.20:0,60,899	0/0:34,0:34:99:0,102,1505	0/0:34,0:34:99:0,99,1466	0/0:37,0:37:99:0,105,1550	0/0:38,0:38:99:0,111,1644	0/0:20,0:20:60.17:0,60,856	0/0:53,0:53:99:0,156,2271	0/0:49,0:49:99:0,144,2129	0/0:37,0:37:99:0,111,1662	0/0:53,0:53:99:0,160,2344	0/0:43,0:42:99:0,129,1858	0/0:21,0:21:63.21:0,63,944	0/0:22,0:22:63.21:0,63,944	0/0:21,0:21:60.20:0,60,897	0/0:38,0:38:99:0,111,1664	0/0:38,0:38:99:0,105,1574	1/1:1,23:24:69.22:896,69,0	0/0:30,0:30:87.28:0,87,1284	0/0:46,0:46:99:0,138,2063	0/0:36,0:36:99:0,108,1573	1/1:2,37:39:99:1440,111,0	1/1:0,39:39:99:1324,102,0	1/1:1,10:11:33.11:427,33,0
chr10	21687197	.	AATTATTATT	A	712.42	PASS	AC=10;AF=0.294;AN=34;BaseQRankSum=2.015;DP=212;FS=3.114;HRun=0;HaplotypeScore=64.8823;InbreedingCoeff=0.5228;MQ=70.77;MQ0=1;MQRankSum=-1.246;QD=15.83;ReadPosRankSum=2.583;VQSLOD=1.5952;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:10:6.02:0,6,115	1/1:2,0:3:1.25:3,1,0	./.	./.	./.	0/0:2,0:4:9.03:0,9,333	0/0:1,0:2:3.01:0,3,117	0/0:43,0:43:33.11:0,33,1005	0/0:4,0:4:6.02:0,6,230	0/0:4,0:4:9.03:0,9,315	./.	./.	0/0:2,0:5:12.03:0,12,377	0/0:11,0:11:3.01:0,3,73	0/0:9,0:10:3.01:0,3,118	1/1:3,0:6:1.84:6,2,0	0/0:11,0:14:0.98:0,1,56	0/0:14,0:15:4.57:0,5,60	1/1:6,2:8:6.02:164,6,0	./.	./.	./.	./.	./.	0/0:8,0:9:9.03:0,9,299	./.	1/1:9,9:18:15.05:409,15,0	1/1:10,0:9:9.03:246,9,0
chr10	21687287	.	GA	G	1841.72	PASS	AB=0.708;AC=24;AF=0.429;AN=56;BaseQRankSum=-3.223;DP=345;FS=10.870;HRun=13;HaplotypeScore=52.6723;InbreedingCoeff=0.5417;MQ=81.72;MQ0=2;MQRankSum=1.505;QD=10.06;ReadPosRankSum=0.827;VQSLOD=1.7698;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:2,0:14:34.84:0,35,192	0/0:0,0:3:8.52:0,9,43	0/1:16,2:14:21.75:36,0,22	0/0:13,0:10:9.29:0,9,70	0/0:12,2:14:12.50:0,13,273	1/1:1,7:9:16.95:115,17,0	0/1:1,5:6:11.27:92,0,11	1/1:22,11:33:14.06:191,14,0	1/1:0,9:9:26.85:197,27,0	1/1:1,13:15:37.81:267,38,0	1/1:1,8:9:23.62:165,24,0	1/1:1,8:9:20.87:153,21,0	1/1:1,15:18:45.80:318,46,0	0/1:5,4:11:42.68:43,0,131	0/0:3,0:3:9.01:0,9,83	0/0:1,0:11:19.89:0,20,100	0/0:2,0:23:22.86:0,23,123	0/0:6,0:20:34.60:0,35,201	0/0:3,0:11:28.77:0,29,161	0/0:1,0:12:29.25:0,29,141	0/0:2,0:8:16.80:0,17,82	0/0:10,1:11:11.14:0,11,270	1/1:0,7:7:20.88:153,21,0	0/1:1,5:6:11.27:92,0,11	1/1:1,7:9:22.91:159,23,0	0/0:16,2:19:4.07:0,4,343	0/1:12,1:14:1.53:2,0,166	0/1:5,4:9:63.60:64,0,92
chr10	21688139	.	CT	C	13732.41	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=6.117;DP=699;FS=24.178;HRun=2;HaplotypeScore=75.3012;InbreedingCoeff=0.9760;MQ=79.64;MQ0=0;MQRankSum=-3.148;QD=35.85;ReadPosRankSum=2.332;VQSLOD=2.9865;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,138,2040	0/0:17,0:17:45.14:0,45,653	0/0:19,0:19:46.70:0,47,665	0/0:13,0:13:35.95:0,36,494	0/0:31,0:31:93.29:0,93,1352	1/1:0,26:26:69.22:896,69,0	1/1:1,29:30:84.27:1091,84,0	1/1:0,34:34:99:1324,102,0	1/1:0,18:18:54.18:701,54,0	1/1:0,28:28:81.25:1035,81,0	1/1:1,18:19:54.17:695,54,0	1/1:1,29:30:84.27:1091,84,0	1/1:0,40:40:99:1323,102,0	1/1:1,29:30:81.26:1052,81,0	0/0:38,0:38:99:0,108,1596	0/0:32,0:32:96.33:0,96,1435	0/0:14,0:14:42.14:0,42,629	0/0:11,0:11:33.11:0,33,487	0/0:15,0:15:42.14:0,42,628	0/0:27,0:27:81.26:0,81,1174	0/0:32,0:32:93.32:0,93,1394	0/0:20,0:20:60.20:0,60,899	1/1:0,24:24:60.19:779,60,0	1/1:0,38:38:99:1363,105,0	1/1:0,22:22:60.20:779,60,0	1/1:1,23:24:69.18:864,69,0	1/1:0,19:19:54.18:701,54,0	1/1:0,1:1:3.01:39,3,0
chr10	21689426	.	A	AT	4280.58	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-11.637;DP=606;FS=0.367;HRun=8;HaplotypeScore=57.6943;InbreedingCoeff=0.9946;MQ=80.10;MQ0=0;MQRankSum=-1.804;QD=27.09;ReadPosRankSum=-0.144;VQSLOD=5.2641;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,16:18:43.68:489,44,0	0/0:8,0:8:21.01:0,21,192	0/0:16,0:17:42.20:0,42,335	0/0:17,0:17:32.81:0,33,278	1/1:9,31:40:93.19:1042,93,0	0/0:27,0:27:75.03:0,75,686	0/0:30,0:30:87.05:0,87,796	1/1:7,20:27:60.17:682,60,0	0/0:16,0:16:42.01:0,42,380	0/0:33,0:33:87.03:0,87,796	0/0:6,0:6:15.01:0,15,137	0/0:23,0:23:66.02:0,66,599	0/0:26,0:26:66.02:0,66,599	0/0:23,0:23:60.03:0,60,549	0/0:25,0:25:62.99:0,63,566	0/0:23,0:23:63.03:0,63,577	0/0:28,0:28:75.04:0,75,686	0/0:12,0:12:27.01:0,27,247	0/0:22,0:22:60.03:0,60,549	0/0:26,0:26:75.03:0,75,682	0/0:17,0:17:45.01:0,45,412	1/1:0,15:15:39.12:450,39,0	0/0:20,0:20:44.99:0,45,403	0/0:23,0:23:46.18:0,46,557	0/0:25,1:26:43.40:0,43,644	1/1:5,21:27:41.67:717,42,0	1/1:2,22:24:60.18:692,60,0	1/1:0,7:7:18.05:208,18,0
chr10	21689735	.	C	CATTA	21911.77	PASS	AB=1.000;AC=38;AF=0.704;AN=54;BaseQRankSum=5.338;DP=660;FS=3.293;HRun=0;HaplotypeScore=152.0297;InbreedingCoeff=0.7286;MQ=57.80;MQ0=3;MQRankSum=-3.201;QD=41.03;ReadPosRankSum=-0.119;VQSLOD=5.2890;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:32,0:32:38.44:1147,38,0	0/0:8,0:8:2.13:0,2,279	0/0:15,0:11:24.97:0,25,385	./.	1/1:47,0:47:82.11:1656,82,0	1/1:38,0:38:99:1985,111,0	1/1:22,0:22:54.06:875,54,0	1/1:42,0:42:99:1839,117,0	1/1:26,0:26:63.22:1148,63,0	1/1:31,0:30:87.29:1547,87,0	1/1:15,0:15:29.13:491,29,0	1/1:29,0:29:81.20:1406,81,0	1/1:27,0:27:69.23:1240,69,0	1/1:24,0:25:66.10:1141,66,0	0/0:21,0:21:63.09:0,63,948	0/0:26,0:26:2.84:0,3,710	0/1:16,0:17:20.68:21,0,372	0/0:21,0:21:12.93:0,13,707	0/0:26,0:26:24.91:0,25,1023	0/1:25,0:25:77.34:77,0,479	0/0:9,0:9:24.05:0,24,333	1/1:21,0:21:5.61:714,6,0	1/1:23,0:26:69.39:1088,69,0	1/1:20,0:19:45.50:670,45,0	1/1:23,0:23:58.40:1078,58,0	1/1:28,4:32:90.31:1859,90,0	1/1:20,8:28:75.26:1490,75,0	1/1:8,0:8:24.08:440,24,0
chr10	21689736	.	A	ATTTC	9909.97	PASS	AB=0.848;AC=51;AF=0.981;AN=52;BaseQRankSum=2.095;DP=761;FS=7.794;HRun=0;HaplotypeScore=284.5807;InbreedingCoeff=0.0051;MQ=54.82;MQ0=4;MQRankSum=-1.732;QD=13.28;ReadPosRankSum=-0.917;VQSLOD=3.2412;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:31,0:31:32.59:257,33,0	1/1:6,2:8:4.26:72,4,0	./.	./.	1/1:46,0:46:57.35:581,57,0	1/1:40,0:40:44.45:382,44,0	1/1:22,0:22:6.01:96,6,0	1/1:45,0:45:3.74:9,4,0	1/1:25,0:25:26.79:262,27,0	1/1:38,0:37:47.83:574,48,0	1/1:20,0:20:23.99:303,24,0	1/1:39,0:39:53.38:659,53,0	1/1:34,0:34:48.12:547,48,0	1/1:36,0:36:62.51:729,63,0	1/1:29,0:28:26.92:342,27,0	1/1:19,0:30:21.07:366,21,0	1/1:17,0:17:6.02:128,6,0	1/1:21,3:27:17.08:259,17,0	0/1:23,4:28:25.64:228,0,26	1/1:10,16:26:44.94:715,45,0	1/1:9,0:9:3:25,3,0	1/1:21,0:21:35.05:441,35,0	1/1:33,0:33:47.96:474,48,0	1/1:23,0:22:8.94:120,9,0	1/1:38,0:38:62.93:903,63,0	1/1:37,0:37:59.91:716,60,0	1/1:34,0:34:41.96:597,42,0	1/1:10,0:9:8.99:124,9,0
chr10	21689788	.	CT	C	1995.13	PASS	AB=0.635;AC=12;AF=0.214;AN=56;BaseQRankSum=3.715;DP=630;FS=4.299;HRun=10;HaplotypeScore=121.1613;InbreedingCoeff=0.7022;MQ=56.62;MQ0=5;MQRankSum=2.191;QD=11.40;ReadPosRankSum=1.942;VQSLOD=2.9009;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:10,21:31:11.71:389,0,12	0/0:7,0:7:18.02:0,18,187	0/0:20,0:11:17.10:0,17,181	0/0:16,0:7:12.85:0,13,114	1/1:17,18:35:8.80:348,9,0	0/0:27,0:27:68.34:0,68,592	0/0:12,0:12:21.04:0,21,223	1/1:11,0:26:47.93:395,48,0	0/0:11,0:11:28.29:0,28,237	0/0:29,0:28:71.26:0,71,643	0/0:25,0:24:48.12:0,48,522	0/0:29,0:29:74.70:0,75,728	0/0:27,0:27:62.50:0,63,555	0/0:30,1:31:54.36:0,54,658	0/0:26,0:25:66.01:0,66,687	0/0:25,0:26:59.94:0,60,593	0/0:21,0:21:47.16:0,47,476	0/0:21,0:21:48.02:0,48,493	0/0:22,0:20:59.97:0,60,578	0/0:28,0:28:72.87:0,73,684	0/0:1,0:1:0:0,0,0	1/1:5,13:18:6.88:276,7,0	0/0:27,0:27:53.40:0,53,511	0/0:13,0:13:27.52:0,28,289	0/0:34,2:36:49.83:0,50,917	0/1:16,15:31:52.76:360,0,53	1/1:12,10:22:5.33:264,5,0	1/1:6,5:11:14.95:130,15,0
chr10	21689789	.	T	TTTCTTTC	7869.73	PASS	AB=1.000;AC=35;AF=0.625;AN=56;BaseQRankSum=14.078;DP=621;FS=4.876;HRun=0;HaplotypeScore=168.2535;InbreedingCoeff=-0.4044;MQ=56.85;MQ0=4;MQRankSum=-4.281;QD=13.01;ReadPosRankSum=-0.486;VQSLOD=3.9036;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:31,0:31:58.33:722,58,0	0/1:7,0:7:2.70:3,0,146	0/1:20,0:11:6.38:6,0,189	0/0:16,0:7:11.31:0,11,97	1/1:35,0:35:59.71:709,60,0	0/1:28,0:28:99:426,0,344	0/1:10,0:10:86.76:87,0,174	1/1:23,0:22:55.61:417,56,0	0/1:11,0:11:99:219,0,99	0/1:29,0:28:99:240,0,444	0/1:25,0:24:73.29:73,0,434	0/1:29,0:29:99:242,0,514	0/1:25,0:25:99:252,0,361	0/1:30,0:30:99:313,0,422	0/1:25,0:24:27.54:28,0,564	0/1:26,0:26:99:290,0,452	0/1:21,0:21:66.87:67,0,387	0/1:21,0:21:57.21:57,0,402	0/1:22,0:21:8.39:8,0,478	0/1:28,0:28:99:157,0,358	1/1:1,0:1:3:25,3,0	1/1:18,0:18:46.80:421,47,0	0/1:27,0:27:99:135,0,370	0/1:13,0:13:52.54:53,0,237	0/1:36,0:36:99:220,0,711	1/1:27,3:31:57.04:1224,57,0	1/1:14,8:22:63.09:1251,63,0	1/1:11,0:11:25.78:226,26,0
chr10	21689791	.	T	TC	1356.01	PASS	AB=0.982;AC=19;AF=0.339;AN=56;BaseQRankSum=15.512;DP=603;FS=1.518;HRun=0;HaplotypeScore=114.8578;InbreedingCoeff=-0.2442;MQ=57.08;MQ0=3;MQRankSum=-4.122;QD=3.56;ReadPosRankSum=-5.125;VQSLOD=1.7738;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:31,1:32:99:99,0,254	0/0:7,0:7:9.68:0,10,201	0/0:20,0:11:20.33:0,20,236	0/0:16,0:7:2.75:0,3,79	0/1:36,0:36:99:104,0,266	0/1:27,0:27:99:178,0,473	0/1:7,2:9:11.32:11,0,229	1/1:21,0:20:29.38:154,29,0	0/1:11,0:11:88.57:89,0,150	0/1:27,0:26:99:106,0,569	0/0:19,6:24:10.95:0,11,602	0/1:29,0:29:70.18:70,0,691	0/1:24,0:24:99:101,0,486	0/1:30,0:30:99:104,0,573	0/0:25,0:24:6.37:0,6,730	0/0:21,0:21:35.26:0,35,608	0/0:17,4:21:13.13:0,13,547	0/0:19,0:19:35.65:0,36,548	0/0:21,0:21:21.91:0,22,580	0/1:26,0:26:83.56:84,0,539	1/1:1,0:1:3:25,3,0	0/1:18,0:18:0.72:1,0,204	0/1:27,0:27:72.07:72,0,545	0/0:11,0:11:22.61:0,23,330	0/0:36,0:36:27.61:0,28,1048	0/1:29,2:31:99:176,0,243	0/1:21,0:21:93.29:93,0,122	0/1:11,0:11:50.44:50,0,100
chr10	21690184	.	A	AG	1013.17	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-2.995;DP=623;FS=6.179;HRun=4;HaplotypeScore=98.8730;InbreedingCoeff=0.9974;MQ=85.76;MQ0=0;MQRankSum=-2.118;QD=34.94;ReadPosRankSum=-3.774;VQSLOD=1.8515;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:72.20:0,72,815	0/0:13,0:13:36.10:0,36,407	0/0:24,1:25:42.55:0,43,753	0/0:22,0:22:57.15:0,57,632	0/0:24,0:24:69.20:0,69,782	0/0:19,0:19:54.15:0,54,611	0/0:19,0:19:54.15:0,54,612	1/1:2,27:29:81.27:1108,81,0	0/0:22,0:22:57.16:0,57,646	0/0:29,0:29:84.24:0,84,953	0/0:19,0:19:48.12:0,48,536	0/0:28,0:28:81.23:0,81,918	0/0:32,0:32:93.25:0,93,1045	0/0:33,0:33:90.26:0,90,1020	0/0:29,0:29:87.25:0,87,987	0/0:23,0:23:66.17:0,66,739	0/0:32,0:32:90.26:0,90,1021	0/0:8,0:8:24.07:0,24,272	0/0:15,0:15:45.13:0,45,509	0/0:28,0:28:84.24:0,84,952	0/0:28,0:29:78.22:0,78,885	0/0:15,0:15:45.13:0,45,510	0/0:11,0:11:33.09:0,33,374	0/0:16,0:15:45.09:0,45,496	0/0:24,0:23:63.18:0,63,715	0/0:18,0:18:45.13:0,45,510	0/0:22,0:21:60.17:0,60,680	0/0:12,0:12:36.09:0,36,398
chr10	21690265	.	CT	C	4325.27	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=9.332;DP=598;FS=0.718;HRun=8;HaplotypeScore=107.2868;InbreedingCoeff=0.9571;MQ=79.75;MQ0=0;MQRankSum=-2.722;QD=24.58;ReadPosRankSum=0.340;VQSLOD=4.4656;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,23:23:69.11:666,69,0	0/0:6,0:6:18.06:0,18,217	0/0:27,0:27:63.15:0,63,715	0/0:11,0:11:1.02:0,1,129	1/1:3,24:27:72.11:695,72,0	0/0:27,0:27:75.23:0,75,906	0/0:18,0:17:45.11:0,45,518	1/1:5,32:37:96.12:915,96,0	0/0:20,0:20:54.17:0,54,652	0/0:20,1:21:31.20:0,31,644	0/0:16,0:16:45.14:0,45,541	0/0:14,0:14:42.13:0,42,507	0/0:25,0:25:66.20:0,66,787	0/0:24,0:24:69.19:0,69,819	0/0:17,0:17:40.37:0,40,474	0/0:25,0:25:69.18:0,69,818	0/0:25,0:25:69.20:0,69,822	0/0:13,0:13:36.11:0,36,435	0/0:15,0:15:33.10:0,33,399	0/0:32,0:32:81.25:0,81,976	0/0:25,0:25:72.21:0,72,856	1/1:2,13:15:36.05:348,36,0	0/0:19,0:19:54.17:0,54,652	0/0:22,0:22:60.18:0,60,724	0/0:20,0:20:54.17:0,54,652	1/1:2,21:23:29.86:572,30,0	1/1:4,26:30:78.12:753,78,0	1/1:7,13:20:39.06:376,39,0
chr10	21690411	.	T	TAA	2395.25	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=8.247;DP=501;FS=9.379;HRun=0;HaplotypeScore=89.7989;InbreedingCoeff=0.9196;MQ=74.80;MQ0=1;MQRankSum=-2.488;QD=21.58;ReadPosRankSum=0.273;VQSLOD=3.8028;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:39.11:0,39,460	1/1:3,6:9:24.54:320,25,0	0/0:23,0:16:29:0,29,306	0/1:12,0:10:1.05:1,0,218	0/0:42,0:42:99:0,126,2000	0/0:21,0:21:61.75:0,62,955	0/0:11,0:11:33.10:0,33,515	0/0:25,0:25:75.23:0,75,1141	0/0:11,0:11:33.11:0,33,538	0/0:28,0:28:81.28:0,81,1298	0/0:17,0:17:48.15:0,48,747	0/0:14,0:14:42.13:0,42,661	0/0:29,0:29:87.26:0,87,1317	0/0:22,0:22:66.21:0,66,1043	0/0:14,0:14:42.14:0,42,682	1/1:2,13:19:34.30:462,34,0	1/1:1,14:16:24.97:332,25,0	1/1:2,19:22:46.80:665,47,0	1/1:6,6:13:21.18:289,21,0	1/1:2,14:17:32.25:450,32,0	1/1:2,1:3:5.43:69,5,0	0/0:11,0:11:33.09:0,33,481	0/0:20,0:20:57.18:0,57,902	0/0:18,0:18:51.12:0,51,772	0/0:28,0:28:84.26:0,84,1314	0/0:14,0:14:42.14:0,42,634	0/0:22,0:22:60.20:0,60,923	0/0:5,0:5:12.04:0,12,181
chr10	21690412	.	TA	T	674.26	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=3.998;DP=520;FS=5.872;HRun=11;HaplotypeScore=92.7646;InbreedingCoeff=0.8645;MQ=74.52;MQ0=1;MQRankSum=-0.134;QD=16.45;ReadPosRankSum=2.178;VQSLOD=4.3897;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:3,0:15:31.32:0,31,157	0/0:8,0:8:22.85:0,23,120	0/0:23,0:16:17.46:0,17,134	0/0:12,1:11:17.90:0,18,151	0/0:39,3:42:37.18:0,37,988	0/0:21,0:21:28.49:0,28,489	0/0:13,0:13:33.06:0,33,338	0/0:24,1:25:31.73:0,32,520	0/0:11,0:11:33.03:0,33,338	0/0:28,0:28:69.16:0,69,725	0/0:17,1:18:20.43:0,20,400	0/0:14,0:14:39.09:0,39,410	0/0:27,1:28:47.60:0,48,703	0/0:22,0:22:57.14:0,57,607	0/0:16,0:16:39.07:0,39,400	0/0:22,0:22:50.91:0,51,279	0/0:20,0:20:36.73:0,37,180	0/0:23,0:23:45.49:0,45,229	0/0:15,0:15:28.39:0,28,148	0/0:20,0:20:42.66:0,43,218	0/0:3,0:3:2.84:0,3,14	0/0:13,0:13:33.01:0,33,317	0/0:21,0:21:51.12:0,51,534	0/0:18,0:18:51.08:0,51,519	0/0:26,1:27:56.63:0,57,798	1/1:3,11:14:3.94:236,4,0	1/1:1,21:22:56.93:468,57,0	1/1:0,5:5:11.99:98,12,0
chr10	21690532	.	TTG	T	13128.52	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=9.485;DP=671;FS=16.420;HRun=0;HaplotypeScore=86.8310;InbreedingCoeff=0.9988;MQ=68.84;MQ0=14;MQRankSum=1.302;QD=36.07;ReadPosRankSum=5.229;VQSLOD=5.5356;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,28:28:51.50:948,51,0	0/0:7,0:7:18.06:0,18,327	0/0:29,0:24:56.99:0,57,1005	0/0:29,0:27:65.34:0,65,946	1/1:0,29:28:78.20:1137,78,0	1/1:2,26:27:69.23:1056,69,0	1/1:2,21:20:51.17:780,51,0	1/1:0,24:20:55.96:826,56,0	1/1:0,16:16:48.16:733,48,0	1/1:0,26:25:69.22:1034,69,0	1/1:0,23:23:57.09:833,57,0	1/1:1,17:17:42.14:642,42,0	1/1:2,29:31:69.23:1055,69,0	1/1:0,21:21:51.17:780,51,0	0/0:20,0:20:60.19:0,60,1029	0/0:28,0:28:84.27:0,84,1364	0/0:36,0:36:95.13:0,95,1796	0/0:29,0:29:78.25:0,78,1352	0/0:18,0:17:51.17:0,51,863	0/0:19,0:19:57.18:0,57,942	0/0:21,0:21:63.22:0,63,1135	1/1:1,22:21:51.04:779,51,0	1/1:0,23:22:51.17:780,51,0	1/1:0,25:25:57.19:873,57,0	1/1:0,22:21:57.19:872,57,0	0/0:27,1:28:35.33:0,35,1359	0/0:31,0:31:93.32:0,93,1611	0/0:12,0:12:36.12:0,36,581
chr10	21691042	.	CGTGT	C	1031.87	PASS	AB=0.724;AC=12;AF=0.222;AN=54;BaseQRankSum=0.514;DP=735;FS=9.339;HRun=0;HaplotypeScore=133.5590;InbreedingCoeff=0.4759;MQ=62.41;MQ0=23;MQRankSum=0.806;QD=5.67;ReadPosRankSum=0.881;VQSLOD=1.9295;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:48:5.85:0,6,68	1/1:5,4:9:9.03:141,9,0	0/0:34,0:16:0:0,0,0	./.	0/0:18,0:26:1.35:0,1,96	0/0:35,0:34:14.91:0,15,168	0/0:34,0:35:5.69:0,6,71	1/1:38,0:36:7.66:27,8,0	0/0:23,0:22:5.95:0,6,64	0/0:20,0:20:41.60:0,42,575	0/0:18,0:18:18.02:0,18,245	0/0:30,0:30:18.04:0,18,253	0/0:24,0:25:22.96:0,23,282	0/0:30,0:30:12.04:0,12,188	0/0:26,0:27:29.84:0,30,585	0/1:19,9:31:62.20:419,0,62	1/1:14,12:27:14.83:306,15,0	0/1:15,8:24:25.04:153,0,25	1/1:23,1:24:0.59:43,1,0	0/0:8,0:8:0:0,0,0	1/1:27,0:25:5.85:90,6,0	0/0:21,0:23:29.05:0,29,347	0/0:16,0:23:3.01:0,3,41	0/0:35,0:34:24.08:0,24,437	0/0:22,0:23:3.01:0,3,52	0/0:30,0:27:37.89:0,38,519	0/0:19,0:19:17.24:0,17,207	0/0:2,0:2:6.02:0,6,83
chr10	21691081	.	G	GTGTGTA	2684.78	PASS	AB=0.864;AC=30;AF=0.556;AN=54;BaseQRankSum=5.900;DP=716;FS=10.950;HRun=0;HaplotypeScore=146.0363;InbreedingCoeff=0.5934;MQ=58.82;MQ0=9;MQRankSum=-1.528;QD=5.90;ReadPosRankSum=-1.148;VQSLOD=2.0275;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:45,0:45:26.15:26,0,173	0/0:7,0:8:18.01:0,18,224	0/0:27,0:17:47.78:0,48,457	0/0:38,0:23:62.25:0,62,622	0/0:21,0:21:2.19:0,2,164	./.	1/1:4,26:37:2.83:30,3,0	1/1:35,0:34:58.60:587,59,0	0/1:2,21:28:0:0,0,0	1/1:21,0:22:44.55:509,45,0	1/1:8,1:21:12.02:193,12,0	1/1:7,23:36:4.26:48,4,0	1/1:6,16:26:5.90:124,6,0	1/1:5,17:30:6.44:68,6,0	0/0:27,0:27:62.96:0,63,699	0/1:25,2:29:99:168,0,635	0/0:28,0:28:47.07:0,47,609	0/0:20,0:20:27.05:0,27,369	0/0:13,0:13:35.98:0,36,330	0/0:11,0:12:29.84:0,30,244	0/0:36,0:35:50.24:0,50,446	0/1:21,0:21:68.72:69,0,72	1/1:16,1:17:11.98:97,12,0	1/1:11,3:37:17.77:239,18,0	1/1:2,19:26:3.48:46,3,0	1/1:10,0:25:13.46:392,13,0	1/1:11,0:14:24.18:256,24,0	1/1:3,0:3:4.98:25,5,0
chr10	21693735	.	AT	A	890.47	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.046;DP=572;FS=0.000;HRun=4;HaplotypeScore=54.0531;InbreedingCoeff=0.9818;MQ=82.74;MQ0=0;MQRankSum=-2.445;QD=27.83;ReadPosRankSum=-4.018;VQSLOD=1.2604;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:87.27:0,87,1198	0/0:6,0:6:18.06:0,18,252	0/0:16,0:16:41.11:0,41,546	0/0:16,0:16:41.92:0,42,479	0/0:21,0:21:63.21:0,63,881	0/0:23,0:23:69.23:0,69,966	0/0:16,0:16:48.15:0,48,655	1/1:3,29:32:84.23:985,84,0	0/0:18,0:18:54.17:0,54,733	0/0:29,0:29:78.26:0,78,1089	0/0:24,0:24:69.22:0,69,949	0/0:23,0:23:66.19:0,66,889	0/0:28,0:28:84.28:0,84,1176	0/0:29,0:29:81.25:0,81,1100	0/0:24,0:24:72.23:0,72,991	0/0:16,0:16:45.15:0,45,630	0/0:18,0:18:54.18:0,54,755	0/0:7,0:7:18.06:0,18,252	0/0:18,0:18:54.18:0,54,756	0/0:22,0:22:66.22:0,66,924	0/0:11,0:11:33.10:0,33,445	0/0:18,0:18:54.17:0,54,739	0/0:24,0:24:72.22:0,72,975	0/0:9,0:9:24.08:0,24,336	0/0:25,0:25:72.23:0,72,992	0/0:24,0:24:69.23:0,69,966	0/0:33,0:33:90.27:0,90,1240	0/0:12,0:12:36.12:0,36,504
chr10	21694106	.	A	AATG	1356.57	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=1.348;DP=494;FS=5.200;HRun=0;HaplotypeScore=94.6375;InbreedingCoeff=0.5000;MQ=63.89;MQ0=0;MQRankSum=-3.119;QD=21.53;ReadPosRankSum=-2.027;VQSLOD=2.9603;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,7:18:24.76:486,25,0	0/0:12,0:12:3.51:0,4,89	0/0:18,0:14:10.05:0,10,127	0/0:16,0:15:24.08:0,24,332	1/1:16,6:22:30:506,30,0	0/0:19,0:19:31.69:0,32,283	0/0:11,0:11:5.89:0,6,57	0/0:29,0:28:13.25:0,13,68	0/0:14,0:14:2.50:0,3,19	0/0:30,0:30:38.43:0,38,577	0/0:24,0:24:1.89:0,2,251	0/0:11,0:11:1.12:0,1,41	0/0:23,0:23:15.74:0,16,189	0/0:17,0:17:17.27:0,17,226	0/0:20,0:20:42.04:0,42,524	0/0:17,0:16:11.05:0,11,187	0/0:30,0:29:27.18:0,27,252	0/1:12,0:12:36.55:42,0,37	0/0:16,0:16:32.87:0,33,355	0/0:14,0:14:22.33:0,22,194	0/0:7,0:7:2.88:0,3,15	1/1:0,11:11:24.08:465,24,0	0/0:15,0:15:0.23:0,0,149	0/0:6,0:6:5.87:0,6,81	0/0:27,0:27:11.31:0,11,252	0/0:22,0:22:48.14:0,48,632	0/0:28,0:28:60.06:0,60,739	0/0:5,0:5:9.03:0,9,117
chr10	21694123	.	TGATGATGATCATAACAAC	T	837.61	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=1.177;DP=441;FS=19.129;HRun=0;HaplotypeScore=190.8976;InbreedingCoeff=0.5131;MQ=55.25;MQ0=1;MQRankSum=-3.693;QD=23.93;ReadPosRankSum=-2.998;VQSLOD=0.6247;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:39.06:0,39,2050	0/0:9,0:9:20.96:0,21,923	0/1:20,0:12:10:10,0,1206	0/0:15,0:10:27.09:0,27,1700	0/0:20,0:20:45.15:0,45,2350	0/0:16,0:16:36.12:0,36,2335	0/0:11,0:11:6.02:0,6,418	1/1:11,4:14:32.50:929,32,0	0/0:13,0:13:15.05:0,15,908	0/0:28,0:28:72.92:0,73,4572	0/0:20,0:20:48.16:0,48,3152	0/0:8,0:8:15.05:0,15,932	0/0:19,0:19:30.10:0,30,1861	0/0:15,0:15:33.11:0,33,2082	0/0:18,0:18:54.17:0,54,3409	0/0:17,0:16:36.12:0,36,2479	0/0:31,0:30:45.50:0,45,3597	0/0:12,0:12:21.07:0,21,929	0/0:14,0:14:42.14:0,42,2652	0/0:12,0:12:33.11:0,33,1986	0/0:6,0:6:3.01:0,3,245	0/0:12,0:12:27.09:0,27,1613	0/0:14,0:14:29.32:0,29,1864	0/0:5,0:5:15.05:0,15,836	0/0:24,0:24:42.14:0,42,2337	0/0:22,0:22:66.23:0,66,4776	0/0:23,0:23:69.24:0,69,4721	0/0:3,0:3:9.03:0,9,750
chr10	21694135	.	T	TAAC	7613.82	PASS	AB=1.000;AC=45;AF=0.804;AN=56;BaseQRankSum=-5.991;DP=431;FS=8.132;HRun=0;HaplotypeScore=68.2568;InbreedingCoeff=0.5148;MQ=55.17;MQ0=1;MQRankSum=2.319;QD=20.63;ReadPosRankSum=0.709;VQSLOD=3.6027;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,6:19:27.73:296,28,0	1/1:2,7:9:9.92:165,10,0	0/0:14,0:7:14.15:0,14,97	0/0:14,0:9:6.01:0,6,64	1/1:7,11:19:38.86:465,39,0	1/1:5,10:15:18.06:379,18,0	1/1:1,10:11:3.01:63,3,0	0/0:21,0:19:11.03:0,11,63	1/1:0,11:12:9.03:187,9,0	1/1:5,18:24:24.02:704,24,0	1/1:4,19:23:27.10:648,27,0	1/1:0,7:7:9.03:189,9,0	1/1:3,14:17:14.96:315,15,0	1/1:4,11:15:18.06:377,18,0	0/0:13,0:13:33.02:0,33,428	1/1:3,14:16:24.08:505,24,0	1/1:6,25:29:25.19:773,25,0	1/1:4,8:12:12.51:237,13,0	1/1:5,10:15:16.16:408,16,0	1/1:1,12:13:29.96:467,30,0	1/1:0,8:8:3.01:63,3,0	1/1:8,2:10:20.95:241,21,0	1/1:4,10:14:18.45:333,18,0	1/1:4,0:4:12.01:173,12,0	1/1:6,15:21:15.05:316,15,0	0/1:25,0:25:99:143,0,190	0/1:23,0:23:99:119,0,143	0/1:5,0:5:28.70:47,0,29
chr10	21694656	.	GC	G	285.35	PASS	AB=0.500;AC=28;AF=0.875;AN=32;DP=27;FS=0.000;HRun=2;HaplotypeScore=19.7508;InbreedingCoeff=0.1855;MQ=29.00;MQ0=0;QD=10.98;VQSLOD=1.4470;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	1/1:0,3:3:4.98:24,5,0	1/1:0,1:1:2.90:16,3,0	0/1:0,2:2:0:0,0,0	1/1:0,2:2:6.01:62,6,0	./.	1/1:0,2:2:6:54,6,0	1/1:0,2:2:2.60:10,3,0	1/1:0,1:1:2.94:18,3,0	./.	./.	1/1:0,4:4:6.34:36,6,0	1/1:0,1:1:2.92:17,3,0	./.	./.	1/1:0,1:1:3.01:30,3,0	0/0:0,1:1:0:0,0,0	./.	0/1:0,1:1:0:0,0,0	./.	1/1:0,2:2:0.47:1,0,0	1/1:0,1:1:2.92:17,3,0	1/1:0,2:2:6:59,6,0	1/1:0,1:1:2.68:11,3,0	./.
chr10	21694719	.	TA	T	8875.50	PASS	AB=0.857;AC=53;AF=0.981;AN=54;BaseQRankSum=-0.471;DP=336;FS=7.007;HRun=1;HaplotypeScore=136.9542;InbreedingCoeff=-0.0434;MQ=41.95;MQ0=0;MQRankSum=-1.916;QD=26.42;ReadPosRankSum=2.197;VQSLOD=4.4293;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,17:19:39.12:467,39,0	1/1:2,8:10:24.07:285,24,0	1/1:7,0:7:16.22:163,16,0	0/1:5,1:6:30.09:121,0,30	1/1:1,7:8:5.21:70,5,0	1/1:0,18:18:48.14:567,48,0	1/1:0,14:14:30.09:357,30,0	1/1:1,13:14:33.10:396,33,0	1/1:0,10:10:30.09:357,30,0	1/1:2,9:11:27.08:323,27,0	1/1:2,21:23:45.10:539,45,0	1/1:2,7:9:21.06:252,21,0	1/1:1,11:12:33.10:390,33,0	1/1:0,19:19:45.13:529,45,0	1/1:0,24:24:57.17:674,57,0	1/1:0,13:13:30.09:352,30,0	1/1:0,5:5:5.56:68,6,0	./.	1/1:0,3:3:9.03:105,9,0	1/1:0,23:23:48.14:575,48,0	1/1:0,5:5:6.01:72,6,0	1/1:0,11:11:23.61:286,24,0	1/1:0,14:14:33.06:395,33,0	1/1:1,7:8:3.01:36,3,0	1/1:1,12:13:24.07:285,24,0	1/1:2,15:17:45.14:539,45,0	1/1:0,17:17:48.14:563,48,0	1/1:0,3:3:9.03:108,9,0
chr10	21697086	.	AC	A	687.62	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.512;DP=677;FS=0.000;HRun=3;HaplotypeScore=72.1352;InbreedingCoeff=0.9744;MQ=67.92;MQ0=4;MQRankSum=0.415;QD=25.47;ReadPosRankSum=-1.958;VQSLOD=2.3201;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,99,1210	0/0:6,0:6:18.06:0,18,244	0/0:26,0:22:51.13:0,51,604	0/0:17,0:11:23.83:0,24,298	0/0:27,0:27:75.20:0,75,969	0/0:26,0:26:75.15:0,75,930	0/0:21,0:21:63.16:0,63,789	1/1:4,23:25:69.14:782,69,0	0/0:13,0:13:36.10:0,36,471	0/0:31,0:30:87.24:0,87,1130	0/0:33,0:33:86.77:0,87,1099	0/0:13,0:13:39.10:0,39,496	0/0:26,0:25:75.07:0,75,943	0/0:25,0:25:75.20:0,75,967	0/0:37,0:37:99:0,111,1374	0/0:21,0:21:60.15:0,60,753	0/0:33,1:34:62.50:0,62,1173	0/0:14,0:14:39.52:0,40,473	0/0:30,0:30:82.96:0,83,923	0/0:35,0:35:97.02:0,97,1253	0/0:22,0:22:63.06:0,63,811	0/0:20,0:20:57.15:0,57,725	0/0:16,0:16:48.11:0,48,615	0/0:29,0:29:73.01:0,73,999	0/0:20,0:20:54.17:0,54,718	0/0:31,0:31:90.13:0,90,1060	0/0:34,0:33:99:0,102,1205	0/0:6,0:6:15.02:0,15,160
chr10	21697329	.	A	AT	2035.90	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-9.879;DP=760;FS=5.739;HRun=9;HaplotypeScore=71.7665;InbreedingCoeff=0.9904;MQ=74.22;MQ0=0;MQRankSum=-1.412;QD=23.95;ReadPosRankSum=-1.389;VQSLOD=4.0330;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:68.94:0,69,594	0/0:14,0:14:38.98:0,39,338	0/0:22,0:22:20.94:0,21,238	0/0:20,0:20:42.35:0,42,347	0/0:33,0:34:82.99:0,83,706	0/0:27,0:27:68.98:0,69,599	0/0:31,0:31:77.97:0,78,677	0/0:29,0:29:68.96:0,69,596	0/0:35,0:35:95.98:0,96,833	0/0:27,0:27:74.98:0,75,651	0/0:32,0:32:95.96:0,96,830	0/0:24,0:25:62.02:0,62,527	0/0:30,0:30:57.15:0,57,630	0/0:42,0:42:99:0,117,1015	0/0:47,1:48:99:0,108,1165	0/0:40,0:40:99:0,114,990	0/0:17,0:18:44.03:0,44,370	0/0:7,0:7:21:0,21,182	0/0:22,0:22:25.61:0,26,391	0/0:28,0:28:71.98:0,72,625	0/0:15,0:15:35.99:0,36,313	0/0:28,0:28:74.97:0,75,651	0/0:20,0:20:56.98:0,57,495	0/0:28,0:28:74.95:0,75,647	0/0:25,0:25:40.35:0,40,493	1/1:5,29:34:15.08:842,15,0	1/1:4,38:41:73.04:1036,73,0	1/1:0,9:9:27.07:298,27,0
chr10	21698376	.	AAT	A	1040.31	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-0.947;DP=440;FS=2.428;HRun=0;HaplotypeScore=65.7422;InbreedingCoeff=0.6867;MQ=62.87;MQ0=2;MQRankSum=0.920;QD=25.37;ReadPosRankSum=-4.667;VQSLOD=2.9930;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:42.14:0,42,700	0/0:8,0:8:24.08:0,24,402	0/0:6,0:4:3.48:0,3,35	0/0:13,0:4:9:0,9,105	0/0:25,0:25:60.20:0,60,994	0/0:22,0:22:57.18:0,57,926	0/0:11,0:11:24.08:0,24,402	1/1:10,31:41:93.23:1135,93,0	0/0:7,0:7:18.06:0,18,301	0/0:14,0:14:36.12:0,36,602	0/0:20,0:20:48.16:0,48,803	0/0:6,0:6:15.05:0,15,248	0/0:15,0:15:39.13:0,39,653	0/0:16,0:16:36.12:0,36,590	0/0:14,0:14:36.12:0,36,581	0/0:19,0:19:39.13:0,39,649	0/0:28,0:28:69.21:0,69,1113	0/0:17,0:18:45.15:0,45,729	0/0:18,0:18:42.14:0,42,691	0/0:15,0:15:39.13:0,39,653	0/0:9,0:9:27.09:0,27,452	0/0:12,0:12:24.08:0,24,395	0/0:13,0:13:30.10:0,30,495	0/0:2,0:2:3.01:0,3,50	0/0:6,0:6:15.05:0,15,251	0/0:28,0:28:69.23:0,69,1132	0/0:22,0:22:54.18:0,54,870	0/0:13,0:13:39.13:0,39,653
chr10	21699730	.	GAC	G	982.61	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=0.474;DP=583;FS=2.553;HRun=0;HaplotypeScore=118.8126;InbreedingCoeff=0.8896;MQ=80.16;MQ0=0;MQRankSum=-2.702;QD=25.86;ReadPosRankSum=-4.213;VQSLOD=3.6692;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:45.15:0,45,765	0/0:8,0:8:18.06:0,18,302	0/0:21,0:20:39.13:0,39,622	0/0:12,0:12:18.06:0,18,282	0/0:30,0:30:84.27:0,84,1394	0/0:22,0:22:54.18:0,54,914	0/0:16,0:16:42.14:0,42,714	1/1:9,29:38:84.26:1077,84,0	0/0:16,0:16:36.12:0,36,612	0/0:27,0:27:72.25:0,72,1225	0/0:29,0:29:69.24:0,69,1173	0/0:14,0:14:33.11:0,33,555	0/0:28,0:28:69.16:0,69,1172	0/0:13,0:13:30.10:0,30,504	0/0:36,0:36:99:0,102,1735	0/0:29,0:29:60.19:0,60,994	0/0:25,0:25:63.22:0,63,1067	0/0:10,0:10:24.08:0,24,408	0/0:25,0:25:66.22:0,66,1095	0/0:19,0:19:51.17:0,51,861	0/0:5,0:5:9.03:0,9,153	0/0:13,0:13:36.12:0,36,612	0/0:18,0:18:39.13:0,39,663	0/0:9,0:9:15.05:0,15,251	0/0:32,0:32:81.28:0,81,1374	0/0:30,0:30:84.29:0,84,1429	0/0:30,0:30:75.26:0,75,1265	0/0:4,0:4:12.04:0,12,204
chr10	21699769	.	CGT	C	12318.45	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=8.127;DP=609;FS=4.995;HRun=0;HaplotypeScore=111.0907;InbreedingCoeff=0.8980;MQ=67.80;MQ0=8;MQRankSum=-0.838;QD=24.94;ReadPosRankSum=2.326;VQSLOD=5.3452;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,19:23:33.11:416,33,0	1/1:0,9:9:18.06:227,18,0	0/0:39,0:12:11.05:0,11,110	0/0:32,0:7:2.97:0,3,38	1/1:6,17:23:39.02:492,39,0	1/1:6,15:21:39.12:492,39,0	1/1:3,13:16:27.09:341,27,0	1/1:19,17:36:78.23:958,78,0	1/1:4,15:19:30.10:379,30,0	1/1:6,20:26:60.17:740,60,0	1/1:3,22:25:41.93:530,42,0	1/1:2,16:18:32.99:416,33,0	1/1:3,25:28:57.18:719,57,0	1/1:1,12:13:30.10:378,30,0	0/0:44,0:44:74.16:0,74,1684	1/1:6,25:31:51.16:644,51,0	1/1:3,17:20:42.04:530,42,0	1/1:0,9:9:18.06:227,18,0	1/1:6,14:19:42.13:526,42,0	1/1:2,15:17:36.01:454,36,0	1/1:1,10:11:21.07:265,21,0	1/1:1,9:10:21.07:265,21,0	1/1:3,18:21:39.12:492,39,0	1/1:1,11:12:24.08:303,24,0	1/1:1,24:25:57.18:719,57,0	1/1:4,25:29:75.24:936,75,0	1/1:1,25:26:57.18:719,57,0	1/1:1,5:6:12.04:151,12,0
chr10	21699843	.	GTA	G	1140.77	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=-0.451;DP=668;FS=5.291;HRun=0;HaplotypeScore=122.9502;InbreedingCoeff=0.6852;MQ=62.72;MQ0=2;MQRankSum=1.114;QD=18.70;ReadPosRankSum=-4.563;VQSLOD=2.6984;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:48.14:0,48,801	0/0:9,0:9:21.07:0,21,359	0/0:18,0:9:12.54:0,13,120	0/1:16,0:6:3.14:3,0,47	0/0:32,0:32:93.27:0,93,1501	0/0:27,0:27:75.26:0,75,1298	0/0:32,0:32:84.24:0,84,1358	1/1:10,34:44:99:1235,102,0	0/0:20,0:20:57.15:0,57,918	0/0:25,0:25:66.21:0,66,1095	0/0:32,0:32:78.24:0,78,1286	0/0:24,0:24:60.19:0,60,1006	0/0:21,0:21:45.14:0,45,751	0/0:23,0:23:66.23:0,66,1125	0/0:31,0:31:87.28:0,87,1474	0/0:25,0:25:57.18:0,57,955	0/0:14,0:14:36.10:0,36,594	0/0:7,0:7:12.04:0,12,189	0/0:27,1:27:69.21:0,69,1112	0/0:34,0:34:87.28:0,87,1456	0/0:24,0:24:69.20:0,69,1128	0/0:15,0:15:42.13:0,42,695	0/0:30,0:30:84.27:0,84,1426	0/0:19,0:19:54.18:0,54,929	0/0:27,0:27:69.21:0,69,1140	0/0:37,0:37:99:0,105,1741	0/0:26,0:26:72.21:0,72,1174	0/0:7,0:7:12.04:0,12,208
chr10	21700038	.	G	GC	3121.15	PASS	AB=0.640;AC=20;AF=0.357;AN=56;BaseQRankSum=4.432;DP=518;FS=13.739;HRun=5;HaplotypeScore=89.7241;InbreedingCoeff=0.8018;MQ=89.54;MQ0=0;MQRankSum=-0.625;QD=17.34;ReadPosRankSum=-0.425;VQSLOD=2.1935;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:21:62.78:491,63,0	1/1:1,6:7:12.03:149,12,0	0/0:23,0:23:30.41:0,30,512	0/0:20,0:20:39.32:0,39,387	1/1:25,1:26:72.31:616,72,0	0/0:20,0:20:21.03:0,21,195	0/0:15,0:15:17.53:0,18,172	1/1:7,17:25:26.38:319,26,0	0/0:13,0:13:5.31:0,5,112	0/0:17,0:17:30.75:0,31,173	0/0:24,0:24:52.03:0,52,281	0/0:24,0:24:35.98:0,36,274	0/0:26,0:26:57.15:0,57,291	0/0:25,0:25:53.90:0,54,281	0/0:25,0:25:72.18:0,72,774	1/1:3,19:22:42.13:519,42,0	1/1:3,13:16:33.08:394,33,0	1/1:1,4:5:12.02:134,12,0	0/1:4,4:8:2.06:82,0,2	1/1:4,8:13:5.37:54,5,0	0/1:7,12:19:25.68:171,0,26	1/1:16,2:18:47.80:399,48,0	0/0:11,0:11:2.59:0,3,127	0/0:16,0:16:37.48:0,37,205	0/0:20,0:20:51.64:0,52,286	0/0:24,0:24:69.16:0,69,732	0/0:29,0:28:75.19:0,75,805	0/0:6,0:6:18.05:0,18,193
chr10	21700042	.	C	CA	2958.73	PASS	AB=0.989;AC=15;AF=0.268;AN=56;BaseQRankSum=4.914;DP=544;FS=2.889;HRun=0;HaplotypeScore=97.4030;InbreedingCoeff=0.5561;MQ=88.34;MQ0=0;MQRankSum=-2.795;QD=16.53;ReadPosRankSum=5.169;VQSLOD=5.9689;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,21:22:63.21:980,63,0	1/1:7,0:7:10.38:41,10,0	0/0:24,0:24:69.58:0,70,848	0/0:19,0:19:45.09:0,45,572	1/1:1,25:26:78.13:1129,78,0	0/0:22,0:22:57.14:0,57,680	0/0:15,0:15:38.92:0,39,524	0/1:28,0:28:9.59:10,0,260	0/0:13,0:13:36.97:0,37,428	0/0:19,0:19:54.08:0,54,623	0/0:24,0:24:72.15:0,72,849	0/0:25,0:25:69.06:0,69,824	0/0:27,0:27:69.17:0,69,822	0/0:26,0:26:69.97:0,70,800	0/0:26,0:26:75.24:0,75,1031	0/1:24,0:24:25.84:99,0,26	0/1:16,0:17:8.85:96,0,9	1/1:5,0:5:8.72:33,9,0	0/1:9,0:9:9.45:9,0,75	0/0:12,0:12:13.95:0,14,147	0/1:22,0:22:7.83:8,0,244	1/1:2,17:19:51.06:735,51,0	0/0:14,0:14:36.05:0,36,419	0/0:17,0:17:51.11:0,51,605	0/0:22,0:22:60.16:0,60,735	0/0:26,0:26:78.23:0,78,1040	0/0:28,0:27:84.24:0,84,1122	0/0:6,0:6:18.06:0,18,251
chr10	21700817	.	TTTG	T	1426.39	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.807;DP=804;FS=15.287;HRun=0;HaplotypeScore=113.6418;InbreedingCoeff=0.9982;MQ=71.29;MQ0=1;MQRankSum=-0.980;QD=31.01;ReadPosRankSum=-5.131;VQSLOD=1.6989;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,138,2805	0/0:14,0:14:39.13:0,39,790	0/0:34,0:25:53.99:0,54,892	0/0:25,0:19:41.90:0,42,623	0/0:40,0:40:99:0,102,1958	0/0:31,0:31:84.27:0,84,1723	0/0:20,0:20:57.15:0,57,1059	1/1:7,39:45:99:1521,111,0	0/0:22,0:22:57.20:0,57,1188	0/0:34,0:34:96.32:0,96,1936	0/0:34,0:34:96.23:0,96,1868	0/0:29,0:29:72.25:0,72,1506	0/0:28,0:28:81.28:0,81,1693	0/0:24,0:24:72.23:0,72,1382	0/0:36,0:36:96.28:0,96,1896	0/0:25,0:25:69.24:0,69,1438	0/0:24,0:24:61.09:0,61,1190	0/0:13,0:13:30.94:0,31,540	0/0:26,0:25:66.17:0,66,1264	0/0:40,0:40:99:0,117,2319	0/0:11,0:11:33.11:0,33,656	0/0:33,0:33:99:0,99,1992	0/0:31,0:31:87.30:0,87,1807	0/0:28,0:28:81.26:0,81,1670	0/0:33,0:33:87.30:0,87,1770	0/0:34,0:34:96.30:0,96,1891	0/0:31,0:31:66.49:0,66,1705	0/0:9,0:9:27.09:0,27,553
chr10	21701118	.	ACTCTCTCTCT	A	1233.60	PASS	AB=1.000;AC=25;AF=0.595;AN=42;BaseQRankSum=3.749;DP=519;FS=15.154;HRun=0;HaplotypeScore=151.2425;InbreedingCoeff=0.1683;MQ=73.39;MQ0=3;MQRankSum=-2.738;QD=4.52;ReadPosRankSum=-1.154;VQSLOD=1.8791;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:25:6.02:0,6,239	0/0:8,0:8:0.47:0,0,1	./.	./.	./.	1/1:23,0:23:3.01:59,3,0	1/1:24,0:24:2.07:31,2,0	0/0:24,0:24:1.25:0,1,3	1/1:16,0:16:12.04:280,12,0	1/1:16,0:16:3.01:85,3,0	1/1:18,0:18:0.47:1,0,0	./.	1/1:22,0:22:18.06:442,18,0	0/0:22,0:22:0:0,0,0	0/0:14,0:14:3:0,3,25	1/1:23,0:23:3.01:53,3,0	0/1:16,0:16:23.78:24,0,83	1/1:1,4:5:3.01:87,3,0	0/1:18,0:17:1.38:83,0,1	0/1:11,0:11:14.96:51,0,15	1/1:18,0:18:5.14:93,5,0	./.	./.	1/1:18,0:18:0.47:1,0,0	./.	0/1:24,0:24:60.63:61,0,432	0/1:21,0:20:0.70:1,0,48	0/0:16,0:16:6.02:0,6,112
chr10	21701178	.	TGTGTGTGTGTGTGTGA	T	4188.51	PASS	AB=1.000;AC=33;AF=0.660;AN=50;BaseQRankSum=2.307;DP=500;FS=1.962;HRun=0;HaplotypeScore=167.6662;InbreedingCoeff=0.3099;MQ=37.50;MQ0=41;MQRankSum=-2.201;QD=13.69;ReadPosRankSum=6.252;VQSLOD=2.4184;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:18,0:16:11.02:11,0,220	1/1:7,0:7:5.23:205,5,0	0/0:41,0:3:6.12:0,6,47	0/0:44,0:6:9.38:0,9,154	0/1:15,0:15:0:0,0,0	1/1:14,1:15:3.01:128,3,0	0/0:21,0:20:4.13:0,4,10	0/1:20,0:19:49.29:49,0,156	1/1:14,2:16:13.37:178,13,0	1/1:14,1:13:17.86:422,18,0	./.	1/1:9,1:9:2.71:122,3,0	1/1:20,0:19:16.62:248,17,0	1/1:21,0:18:3.01:131,3,0	0/0:17,0:16:6.02:0,6,255	1/1:23,0:23:8.98:363,9,0	1/1:15,0:15:1.25:3,1,0	0/1:9,0:9:87.13:98,0,87	1/1:18,0:16:30:801,30,0	1/1:23,0:23:3.01:76,3,0	0/0:8,0:8:0.37:0,0,1	0/0:15,0:15:5.80:0,6,253	./.	./.	1/1:21,1:22:1.25:3,1,0	1/1:25,0:24:44.62:857,45,0	1/1:8,0:8:20.98:463,21,0	0/1:6,0:5:30.89:31,0,87
chr10	21701180	.	TGTGTGTGTGTGTGA	T	4722.24	PASS	AB=0.967;AC=33;AF=0.688;AN=48;BaseQRankSum=0.306;DP=514;FS=0.000;HRun=0;HaplotypeScore=166.3648;InbreedingCoeff=0.2959;MQ=37.48;MQ0=39;MQRankSum=-1.165;QD=13.89;ReadPosRankSum=5.864;VQSLOD=3.3509;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:20,0:18:22.86:23,0,209	1/1:7,0:7:5.02:234,5,0	0/1:44,0:3:0.72:1,0,3	0/0:48,0:6:8.97:0,9,131	./.	1/1:12,3:15:6.02:192,6,0	0/0:19,1:20:3.77:0,4,9	0/1:22,0:22:99:100,0,124	1/1:16,1:17:16.38:240,16,0	1/1:14,1:13:17.86:402,18,0	./.	1/1:7,3:9:2.71:112,3,0	1/1:18,2:19:16.62:212,17,0	1/1:13,7:17:3.01:116,3,0	0/0:17,0:16:6.02:0,6,208	1/1:23,2:25:17.99:512,18,0	1/1:15,0:15:1.25:3,1,0	0/1:10,0:10:78.44:126,0,78	1/1:14,3:15:35.15:809,35,0	1/1:19,3:22:3.01:93,3,0	0/0:8,0:8:0.37:0,0,1	0/0:17,0:17:8.81:0,9,276	./.	./.	1/1:16,6:22:1.25:3,1,0	1/1:24,2:25:55.12:994,55,0	1/1:8,0:8:20.98:537,21,0	0/1:4,1:5:13.12:13,0,71
chr10	21701182	.	TGTGTGTGTGTGA	T	4369.04	PASS	AB=0.982;AC=35;AF=0.700;AN=50;BaseQRankSum=0.549;DP=521;FS=0.963;HRun=0;HaplotypeScore=165.1104;InbreedingCoeff=0.3052;MQ=37.55;MQ0=39;MQRankSum=-2.078;QD=12.04;ReadPosRankSum=5.094;VQSLOD=3.4804;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:20,0:18:24.97:25,0,117	1/1:5,2:7:5.23:199,5,0	0/1:44,0:3:0.73:1,0,3	0/0:52,0:6:8.75:0,9,112	./.	1/1:16,0:16:9.03:194,9,0	0/0:19,1:20:3.77:0,4,8	0/1:22,0:22:34.21:202,0,34	1/1:17,0:17:19.39:240,19,0	1/1:14,1:13:17.86:352,18,0	1/1:21,0:20:3.01:36,3,0	1/1:11,0:10:5.82:130,6,0	1/1:20,0:19:16.62:184,17,0	1/1:20,0:17:3.01:97,3,0	0/0:18,0:17:9.03:0,9,196	1/1:14,11:25:14.53:404,15,0	1/1:15,0:15:1.25:3,1,0	0/1:9,1:10:45.62:119,0,46	1/1:13,3:14:35.27:702,35,0	1/1:18,5:23:3.01:83,3,0	0/0:8,0:8:0.37:0,0,1	0/0:17,0:17:8.81:0,9,210	./.	./.	1/1:22,0:22:1.82:5,2,0	1/1:23,2:24:55.38:876,55,0	1/1:4,4:8:20.98:464,21,0	0/1:6,0:6:48.92:53,0,49
chr10	21701184	.	TGTGTGTGTGA	T	3821.40	PASS	AB=1.000;AC=37;AF=0.712;AN=52;BaseQRankSum=0.654;DP=528;FS=0.000;HRun=0;HaplotypeScore=164.6753;InbreedingCoeff=0.3747;MQ=38.96;MQ0=38;MQRankSum=-1.093;QD=11.65;ReadPosRankSum=4.634;VQSLOD=2.1574;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:20,0:19:42.50:42,0,46	1/1:7,0:7:5.44:166,5,0	0/0:48,0:4:2.24:0,2,22	0/0:52,0:6:8.75:0,9,99	0/0:15,0:15:0.47:0,0,1	1/1:17,0:17:9.75:136,10,0	0/0:20,0:20:3.16:0,3,6	1/1:23,0:23:15.96:244,16,0	1/1:17,0:17:19.12:181,19,0	1/1:18,0:15:20.86:332,21,0	1/1:20,1:20:2.74:12,3,0	1/1:11,0:10:5.71:93,6,0	1/1:20,0:19:16.59:166,17,0	1/1:19,0:16:3.01:82,3,0	0/0:18,0:17:8.04:0,8,126	1/1:24,0:24:13.95:319,14,0	1/1:14,0:14:1.25:3,1,0	0/1:10,0:10:29.96:106,0,30	1/1:15,0:14:35.31:614,35,0	1/1:10,14:24:3.01:94,3,0	1/1:8,0:8:3.15:25,3,0	0/0:17,0:17:8.79:0,9,132	./.	./.	1/1:21,0:21:1.82:5,2,0	1/1:24,1:24:55.60:769,56,0	1/1:8,0:8:20.98:399,21,0	0/1:5,0:6:34.77:35,0,38
chr10	21701192	.	TGA	T	3386.50	PASS	AB=1.000;AC=52;AF=0.963;AN=54;BaseQRankSum=-1.383;DP=586;FS=3.714;HRun=0;HaplotypeScore=159.9971;InbreedingCoeff=-0.0839;MQ=39.68;MQ0=35;MQRankSum=-0.791;QD=5.93;ReadPosRankSum=1.398;VQSLOD=3.4713;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:18:6.95:82,7,0	1/1:11,0:11:11.64:99,12,0	0/1:54,0:6:13.58:40,0,14	0/1:59,0:9:39.61:59,0,40	./.	1/1:21,0:21:14.98:124,15,0	1/1:25,0:25:2.06:23,2,0	1/1:1,19:20:54.62:370,55,0	1/1:22,0:22:19.30:123,19,0	1/1:9,13:20:32.79:259,33,0	1/1:23,0:22:5.95:48,6,0	1/1:17,0:16:14.96:124,15,0	1/1:22,0:21:19.53:117,20,0	1/1:20,0:17:5.99:49,6,0	1/1:18,0:17:12.03:87,12,0	1/1:24,0:23:20.69:167,21,0	1/1:16,0:16:7.24:52,7,0	1/1:12,0:12:17.75:113,18,0	1/1:14,0:14:38.24:298,38,0	1/1:23,0:23:2.97:20,3,0	1/1:12,1:13:14.71:122,15,0	1/1:19,0:19:7.94:73,8,0	1/1:15,0:15:8.98:73,9,0	1/1:18,0:18:2.83:23,3,0	1/1:23,0:23:11.99:100,12,0	1/1:22,0:22:61.45:447,61,0	1/1:12,0:12:29.85:233,30,0	1/1:6,0:6:8.81:61,9,0
chr10	21701384	.	TC	T	3951.90	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=8.727;DP=576;FS=13.232;HRun=5;HaplotypeScore=57.2522;InbreedingCoeff=0.9973;MQ=81.23;MQ0=0;MQRankSum=-0.562;QD=29.49;ReadPosRankSum=3.517;VQSLOD=3.1222;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:84.25:0,84,1113	1/1:1,6:7:18.05:204,18,0	0/0:21,0:21:60.15:0,60,750	0/0:21,0:21:57.16:0,57,732	0/0:13,0:13:33.11:0,33,451	0/0:26,0:25:75.24:0,75,1009	0/0:23,0:23:69.20:0,69,911	0/0:36,0:36:87.25:0,87,1119	0/0:14,0:14:33.11:0,33,447	0/0:21,0:21:57.18:0,57,763	0/0:13,0:13:39.13:0,39,528	0/0:16,0:16:39.11:0,39,500	0/0:29,0:29:78.19:0,78,1020	0/0:18,0:17:45.14:0,45,601	0/0:15,0:15:45.13:0,45,584	1/1:1,26:27:25.41:673,25,0	1/1:1,15:16:45.13:510,45,0	1/1:1,7:8:21.06:238,21,0	1/1:0,14:14:42.12:476,42,0	1/1:1,26:27:81.08:865,81,0	1/1:2,33:35:87.25:986,87,0	0/0:18,0:18:48.15:0,48,641	0/0:12,0:12:33.09:0,33,425	0/0:35,0:35:99:0,99,1314	0/0:20,0:20:60.16:0,60,770	0/0:27,0:27:78.17:0,78,996	0/0:21,0:20:60.19:0,60,798	0/0:13,0:13:39.13:0,39,533
chr10	21701502	.	T	TTC	483.30	PASS	AB=0.677;AC=1;AF=0.018;AN=56;BaseQRankSum=2.625;DP=640;FS=7.256;HRun=0;HaplotypeScore=81.9172;InbreedingCoeff=-0.0126;MQ=61.00;MQ0=4;MQRankSum=-2.686;QD=23.01;ReadPosRankSum=-1.069;VQSLOD=3.7442;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:30:87.27:0,87,1277	0/0:7,0:7:21.07:0,21,321	0/0:32,0:22:59.77:0,60,848	0/0:34,0:21:36.83:0,37,508	0/0:24,0:24:69.18:0,69,1006	0/0:25,0:25:69.23:0,69,1036	0/0:24,0:24:66.15:0,66,939	0/1:11,10:19:23.44:558,0,23	0/0:18,0:17:45.14:0,45,669	0/0:23,0:23:66.17:0,66,959	0/0:17,0:17:45.14:0,45,667	0/0:17,0:17:48.15:0,48,714	0/0:28,0:28:81.24:0,81,1161	0/0:26,0:26:75.23:0,75,1086	0/0:31,0:31:93.32:0,93,1419	0/0:28,0:27:81.22:0,81,1175	0/0:32,0:32:87.23:0,87,1261	0/0:12,0:12:31.55:0,32,495	0/0:22,0:22:63.18:0,63,888	0/0:18,0:18:48.16:0,48,734	0/0:27,0:27:75.19:0,75,1062	0/0:7,0:7:21.06:0,21,300	0/0:9,0:9:24:0,24,319	0/0:46,0:46:99:0,120,1770	0/0:22,0:22:63.21:0,63,945	0/0:29,0:29:84.26:0,84,1227	0/0:24,0:24:72.22:0,72,1060	0/0:3,0:3:8.95:0,9,77
chr10	21701505	.	TC	T	313.79	PASS	AB=0.657;AC=1;AF=0.018;AN=56;BaseQRankSum=5.876;DP=631;FS=4.708;HRun=1;HaplotypeScore=68.4322;InbreedingCoeff=0.0488;MQ=60.40;MQ0=4;MQRankSum=-0.477;QD=13.64;ReadPosRankSum=-2.660;VQSLOD=1.7327;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:30:83.31:0,83,1088	0/0:7,0:7:21.07:0,21,284	0/0:32,1:23:59.11:0,59,732	0/0:33,0:19:33.57:0,34,430	0/0:24,0:24:71.54:0,72,813	0/0:25,0:25:72.21:0,72,940	0/0:23,0:23:69.09:0,69,858	0/1:11,12:21:13.69:388,0,14	0/0:18,0:17:45.11:0,45,563	0/0:23,0:23:66.16:0,66,839	0/0:16,0:16:44.96:0,45,545	0/0:17,0:17:48.12:0,48,602	0/0:26,0:26:75.67:0,76,967	0/0:23,0:23:69.17:0,69,860	0/0:31,0:31:92.82:0,93,1146	0/0:28,0:27:78.20:0,78,1010	0/0:31,0:31:93.16:0,93,1156	0/0:12,0:12:30.08:0,30,407	0/0:22,0:22:66.11:0,66,794	0/0:17,0:17:48.16:0,48,648	0/0:26,0:26:69.18:0,69,891	0/0:6,0:6:18.06:0,18,241	0/0:9,0:9:20.99:0,21,256	0/0:46,0:46:99:0,117,1554	0/0:24,0:24:69.06:0,69,847	0/0:30,0:30:87.24:0,87,1126	0/0:24,0:24:72.19:0,72,938	0/0:3,0:3:8.88:0,9,73
chr10	21701506	.	C	CTTTTT	724.12	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.901;DP=626;FS=6.654;HRun=6;HaplotypeScore=114.9178;InbreedingCoeff=0.8873;MQ=60.55;MQ0=4;MQRankSum=-0.492;QD=28.96;ReadPosRankSum=-2.883;VQSLOD=-0.4115;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:30:77.44:0,77,1257	0/0:7,0:7:21.07:0,21,353	0/0:32,0:23:46.58:0,47,757	0/0:31,0:19:31.97:0,32,427	0/0:24,0:24:56.72:0,57,879	0/0:25,0:25:66.19:0,66,1112	0/0:22,0:22:60.13:0,60,945	1/1:19,6:23:45.99:819,46,0	0/0:17,0:17:36.11:0,36,611	0/0:21,0:21:60.19:0,60,1022	0/0:16,0:16:39.04:0,39,656	0/0:16,0:16:39.12:0,39,693	0/0:25,0:25:66.65:0,67,1108	0/0:23,0:23:51.11:0,51,847	0/0:31,0:31:72.19:0,72,1295	0/0:28,0:27:75.20:0,75,1244	0/0:32,0:32:87.16:0,87,1394	0/0:12,0:12:30.08:0,30,545	0/0:22,0:22:60.10:0,60,912	0/0:17,0:17:45.14:0,45,748	0/0:24,0:24:63.18:0,63,1056	0/0:7,0:7:18.05:0,18,295	0/0:9,0:9:18.04:0,18,292	0/0:45,0:45:99:0,114,1893	0/0:24,0:24:60.10:0,60,871	0/0:30,0:30:81.19:0,81,1266	0/0:25,0:25:69.13:0,69,1074	0/0:3,0:3:5.98:0,6,57
chr10	21701780	.	CT	C	538.05	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.232;DP=464;FS=8.737;HRun=2;HaplotypeScore=47.9766;InbreedingCoeff=0.9832;MQ=80.05;MQ0=0;MQRankSum=0.144;QD=31.65;ReadPosRankSum=-4.067;VQSLOD=1.1665;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:60.19:0,60,867	0/0:8,0:8:24.07:0,24,341	0/0:13,0:13:39.10:0,39,486	0/0:12,0:12:31.35:0,31,440	0/0:27,0:27:78.24:0,78,1129	0/0:14,0:14:42.14:0,42,629	0/0:23,0:23:60.20:0,60,897	1/1:0,17:17:51.14:633,51,0	0/0:12,0:11:33.07:0,33,463	0/0:21,0:21:63.21:0,63,944	0/0:13,0:13:39.13:0,39,584	0/0:21,0:21:60.20:0,60,898	0/0:15,0:15:45.15:0,45,674	0/0:22,0:22:66.22:0,66,987	0/0:23,0:23:69.22:0,69,1013	0/0:12,0:12:36.10:0,36,516	0/0:18,0:18:51.12:0,51,727	0/0:6,0:6:18.05:0,18,253	0/0:11,0:10:30.10:0,30,450	0/0:31,0:31:93.31:0,93,1391	0/0:10,0:10:21.02:0,21,314	0/0:12,0:12:33.10:0,33,475	0/0:16,0:16:48.16:0,48,706	0/0:11,0:11:33.11:0,33,494	0/0:20,0:20:60.20:0,60,899	0/0:25,0:25:75.25:0,75,1107	0/0:21,0:19:63.21:0,63,944	0/0:9,0:9:27.09:0,27,405
chr10	21701995	.	GA	G	1823.78	PASS	AB=0.938;AC=9;AF=0.161;AN=56;BaseQRankSum=8.814;DP=540;FS=26.831;HRun=10;HaplotypeScore=57.4814;InbreedingCoeff=0.8577;MQ=75.94;MQ0=0;MQRankSum=1.295;QD=15.86;ReadPosRankSum=-0.417;VQSLOD=2.0866;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:51.12:0,51,555	0/0:9,0:10:26.88:0,27,268	0/0:14,1:15:7.35:0,7,284	0/1:14,1:14:4.21:4,0,189	0/0:30,1:31:75.20:0,75,824	0/0:30,1:31:52:0,52,773	0/0:14,0:15:44.95:0,45,479	1/1:6,25:32:73.98:623,74,0	0/0:20,0:20:54.12:0,54,580	0/0:24,0:24:54.15:0,54,596	0/0:17,0:17:42.10:0,42,450	0/0:22,0:24:48.02:0,48,533	0/0:23,1:24:40.12:0,40,668	0/0:28,0:28:75.17:0,75,804	0/0:27,0:27:66.07:0,66,713	0/0:17,0:17:45.12:0,45,498	0/0:15,0:15:27.52:0,28,287	0/0:13,0:13:28.67:0,29,279	0/0:6,0:6:15.02:0,15,155	0/0:22,0:22:54.11:0,54,577	0/0:17,0:17:51.13:0,51,555	0/0:8,0:8:15.04:0,15,161	0/0:15,0:15:39.11:0,39,431	0/0:13,0:13:36.10:0,36,398	0/0:16,0:16:42.11:0,42,465	1/1:4,35:39:99:911,105,0	1/1:5,19:24:41.98:364,42,0	1/1:1,4:5:9:78,9,0
chr10	21702401	.	G	GA	873.42	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-8.710;DP=516;FS=4.934;HRun=7;HaplotypeScore=48.7702;InbreedingCoeff=0.9758;MQ=86.59;MQ0=0;MQRankSum=-1.751;QD=24.26;ReadPosRankSum=-3.608;VQSLOD=2.3785;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:24:0,24,223	0/0:8,0:8:18.03:0,18,174	0/0:19,0:19:42.05:0,42,400	0/0:17,0:17:41.49:0,41,364	0/0:28,0:29:80.16:0,80,758	0/0:20,0:20:57:0,57,526	0/0:17,0:17:39.06:0,39,377	1/1:9,27:36:81.24:968,81,0	0/0:11,0:11:18.02:0,18,174	0/0:24,0:24:60.08:0,60,575	0/0:24,0:24:57.09:0,57,550	0/0:15,0:15:42.05:0,42,399	0/0:17,0:17:45.07:0,45,434	0/0:7,0:7:21.03:0,21,203	0/0:16,0:16:45.07:0,45,434	0/0:30,0:30:81.11:0,81,777	0/0:17,0:17:45.01:0,45,414	0/0:13,0:13:30.04:0,30,289	0/0:16,0:16:42.04:0,42,396	0/0:25,0:25:75.09:0,75,712	0/0:12,0:12:27.02:0,27,255	0/0:12,0:12:30.04:0,30,290	0/0:19,0:19:45.05:0,45,430	0/0:13,0:13:36.01:0,36,338	0/0:29,0:29:78.09:0,78,741	0/0:24,0:23:54.08:0,54,521	0/0:24,0:24:66.02:0,66,610	0/0:13,0:13:39.06:0,39,376
chr10	21702586	.	T	TAC	1335.86	PASS	AB=0.874;AC=38;AF=0.792;AN=48;BaseQRankSum=-0.557;DP=585;FS=0.000;HRun=0;HaplotypeScore=100.8255;InbreedingCoeff=0.0775;MQ=71.74;MQ0=4;MQRankSum=1.740;QD=3.06;ReadPosRankSum=-0.990;VQSLOD=1.4955;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:27:8.52:0,9,42	1/1:4,1:7:6:52,6,0	./.	./.	0/1:17,5:23:17.34:38,0,17	0/1:19,0:18:17.18:120,0,17	0/1:15,4:18:18.19:38,0,18	./.	1/1:15,1:16:5.76:69,6,0	1/1:11,0:11:3:29,3,0	1/1:16,0:16:11.76:130,12,0	0/1:18,1:21:26.10:38,0,26	1/1:23,4:27:3.01:44,3,0	1/1:24,0:24:2.76:44,3,0	1/1:13,3:17:3.01:44,3,0	1/1:29,0:29:23.23:220,23,0	1/1:17,2:26:8.95:88,9,0	1/1:21,0:21:18.85:192,19,0	1/1:26,0:26:3:28,3,0	1/1:8,6:14:2.76:44,3,0	1/1:20,2:32:3:26,3,0	1/1:10,8:18:2.94:44,3,0	1/1:18,0:18:5.76:69,6,0	1/1:17,10:27:3.01:44,3,0	1/1:24,0:24:5.93:67,6,0	0/0:21,0:21:2.58:0,3,26	0/0:10,0:10:2.74:0,3,31	./.
chr10	21703127	.	ACTTCATTGAATGGTTC	A	590.68	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.025;DP=709;FS=1.317;HRun=0;HaplotypeScore=293.6648;InbreedingCoeff=0.9911;MQ=81.06;MQ0=0;MQRankSum=-0.629;QD=53.70;ReadPosRankSum=-2.629;VQSLOD=2.1472;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,120,8525	0/0:16,0:16:42.14:0,42,3015	0/0:15,0:15:42.14:0,42,2342	0/0:21,0:21:20.81:0,21,2367	0/0:28,0:28:84.29:0,84,5952	0/0:25,0:25:66.23:0,66,4726	0/0:20,0:20:60.21:0,60,3990	1/1:4,7:11:21.07:683,21,0	0/0:27,0:27:81.28:0,81,5909	0/0:32,0:32:84.28:0,84,5817	0/0:20,0:20:57.18:0,57,3994	0/0:32,0:32:96.31:0,96,6223	0/0:32,0:32:96.32:0,96,5835	0/0:38,0:38:99:0,99,7026	0/0:39,0:39:99:0,108,7875	0/0:39,0:39:99:0,114,7937	0/0:21,0:21:57.20:0,57,3937	0/0:11,0:11:33.07:0,33,2083	0/0:15,0:15:45.15:0,45,2242	0/0:36,0:36:99:0,105,7513	0/0:45,0:45:99:0,129,9411	0/0:27,0:27:78.26:0,78,5565	0/0:14,0:14:39.13:0,39,3002	0/0:27,0:27:81.28:0,81,6159	0/0:18,0:18:51.18:0,51,3737	0/0:30,0:30:87.30:0,87,6420	0/0:18,0:17:54.19:0,54,3973	0/0:11,0:11:33.11:0,33,2160
chr10	21703414	.	T	TGC	1828.63	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=1.792;DP=846;FS=8.330;HRun=0;HaplotypeScore=114.6176;InbreedingCoeff=0.9956;MQ=60.89;MQ0=3;MQRankSum=-1.463;QD=42.53;ReadPosRankSum=-4.845;VQSLOD=3.1347;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:62.62:0,63,927	0/0:8,0:8:21.07:0,21,318	0/0:48,0:34:93.18:0,93,1227	0/0:27,0:18:51.07:0,51,695	0/0:35,0:35:99:0,99,1444	0/0:19,0:19:57.19:0,57,871	0/0:24,0:24:62.06:0,62,897	1/1:7,36:43:99:1924,120,0	0/0:36,0:36:99:0,102,1427	0/0:41,0:41:99:0,117,1635	0/0:23,0:23:69.21:0,69,1012	0/0:42,0:42:99:0,123,1855	0/0:51,0:51:99:0,150,2101	0/0:33,0:33:93.28:0,93,1378	0/0:47,0:47:99:0,138,1982	0/0:46,0:46:99:0,138,1973	0/0:21,0:21:56.66:0,57,810	0/0:12,0:12:32.99:0,33,403	0/0:24,0:24:72.12:0,72,1026	0/0:29,0:29:87.21:0,87,1199	0/0:43,0:42:99:0,123,1726	0/0:27,0:27:81.22:0,81,1150	0/0:26,0:26:75.20:0,75,1081	0/0:15,0:15:41.94:0,42,642	0/0:23,0:23:63.19:0,63,940	0/0:26,0:26:72.18:0,72,1052	0/0:35,0:35:99:0,102,1443	0/0:12,0:12:35.95:0,36,475
chr10	21703436	.	T	TACGC	1948.51	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=9.877;DP=865;FS=5.566;HRun=0;HaplotypeScore=155.1189;InbreedingCoeff=0.9980;MQ=57.46;MQ0=1;MQRankSum=-9.293;QD=37.47;ReadPosRankSum=-4.610;VQSLOD=2.4068;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:84.13:0,84,1466	0/0:11,0:11:30.06:0,30,482	0/0:37,0:24:59.21:0,59,933	0/0:24,0:18:34.20:0,34,684	0/0:36,0:36:99:0,102,1871	0/0:18,0:18:54.17:0,54,1030	0/0:21,0:21:57.10:0,57,960	1/1:36,16:52:99:2043,100,0	0/0:39,0:39:99:0,111,2164	0/0:43,0:43:99:0,120,2281	0/0:24,0:24:72.23:0,72,1367	0/0:39,0:39:99:0,111,2082	0/0:50,0:50:99:0,144,2665	0/0:35,0:35:99:0,105,2014	0/0:47,0:47:99:0,132,2437	0/0:45,0:45:99:0,135,2389	0/0:20,0:20:56.68:0,57,1049	0/0:10,0:10:27.05:0,27,472	0/0:27,0:26:42.64:0,43,1080	0/0:31,0:31:90.27:0,90,1711	0/0:49,0:48:99:0,138,2573	0/0:27,0:27:81.26:0,81,1542	0/0:27,0:27:78.21:0,78,1436	0/0:21,0:21:56.31:0,56,929	0/0:29,0:29:81.22:0,81,1508	0/0:26,0:26:75.13:0,75,1261	0/0:32,0:32:87.26:0,87,1660	0/0:11,0:11:33.11:0,33,627
chr10	21703995	.	AC	A	4150.41	PASS	AB=0.985;AC=23;AF=0.411;AN=56;BaseQRankSum=-5.348;DP=524;FS=5.070;HRun=3;HaplotypeScore=71.3206;InbreedingCoeff=0.3453;MQ=80.25;MQ0=0;MQRankSum=-0.697;QD=13.56;ReadPosRankSum=-1.066;VQSLOD=2.0292;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:48.12:0,48,613	1/1:0,15:15:45.10:536,45,0	0/0:32,0:26:65.33:0,65,648	0/0:17,0:11:13.50:0,13,194	0/0:25,0:25:75.22:0,75,985	0/0:16,0:16:37.24:0,37,141	0/1:9,0:9:23.24:30,0,23	0/0:30,0:30:90.18:0,90,1111	0/1:23,0:23:10.86:11,0,105	0/1:33,1:34:94.82:105,0,95	0/1:18,1:19:45.91:46,0,64	0/0:14,0:14:22.92:0,23,75	0/1:19,0:19:10.20:10,0,73	0/1:17,1:18:55.30:68,0,55	0/0:16,0:16:48.16:0,48,650	1/1:1,24:25:54.17:664,54,0	1/1:0,8:8:21.07:258,21,0	1/1:3,6:9:21.01:242,21,0	1/1:2,18:20:54.15:642,54,0	1/1:1,31:32:87.10:1001,87,0	1/1:0,14:14:36.11:443,36,0	0/0:11,0:11:27.03:0,27,301	0/1:18,0:18:9.42:9,0,108	0/1:14,0:14:40.10:43,0,40	0/1:29,0:29:41.64:42,0,92	0/0:17,0:17:45.11:0,45,581	0/0:20,0:20:60.16:0,60,769	0/0:4,0:4:12:0,12,128
chr10	21704494	.	TG	T	2691.49	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=10.378;DP=823;FS=16.086;HRun=1;HaplotypeScore=76.4796;InbreedingCoeff=0.9852;MQ=82.40;MQ0=0;MQRankSum=-0.537;QD=36.37;ReadPosRankSum=0.594;VQSLOD=2.1273;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,123,1941	0/0:6,0:6:18.06:0,18,288	0/0:24,0:24:72.19:0,72,1044	0/0:21,0:21:54.16:0,54,813	0/0:44,0:44:99:0,132,2086	0/0:38,0:38:99:0,114,1823	0/0:15,0:15:45.15:0,45,720	0/0:35,0:35:99:0,105,1638	0/0:31,0:31:93.30:0,93,1464	0/0:29,0:29:87.30:0,87,1390	0/0:21,0:21:63.21:0,63,1007	0/0:32,0:32:93.32:0,93,1485	0/0:47,0:47:99:0,141,2252	0/0:40,0:40:99:0,120,1891	0/0:37,0:37:99:0,111,1773	0/0:47,0:47:99:0,141,2252	0/0:38,0:38:99:0,111,1771	0/0:10,0:10:30.10:0,30,479	0/0:24,0:24:72.19:0,72,1099	0/0:34,0:34:99:0,102,1607	0/0:32,0:32:93.30:0,93,1460	0/0:35,0:35:99:0,105,1679	0/0:23,0:23:69.22:0,69,1080	0/0:28,0:28:84.26:0,84,1296	0/0:17,0:17:51.17:0,51,816	1/1:2,34:36:12.38:1313,12,0	1/1:3,28:31:90.27:1223,90,0	1/1:0,7:7:21.07:294,21,0
chr10	21705160	.	TGCTCAATAGGA	T	8937.31	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=10.990;DP=707;FS=16.098;HRun=0;HaplotypeScore=246.3918;InbreedingCoeff=0.9940;MQ=70.56;MQ0=0;MQRankSum=-14.358;QD=67.20;ReadPosRankSum=2.577;VQSLOD=3.2650;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:62,0:62:99:0,184,10048	1/1:2,7:9:18.06:642,18,0	0/0:12,0:12:27.07:0,27,817	0/0:10,0:10:21.07:0,21,888	0/0:31,0:31:93.32:0,93,5183	0/0:14,0:14:42.14:0,42,2423	0/0:30,0:30:84.29:0,84,4641	0/0:36,0:36:93.30:0,93,4585	0/0:23,0:23:69.24:0,69,3899	0/0:25,0:25:75.25:0,75,4087	0/0:25,0:25:75.24:0,75,3956	0/0:23,0:23:69.24:0,69,3859	0/0:35,0:35:99:0,99,5328	0/0:30,0:30:90.31:0,90,4800	0/0:45,0:45:99:0,135,7287	1/1:4,24:28:63.22:2247,63,0	1/1:6,13:19:27.09:963,27,0	1/1:3,8:11:24.08:856,24,0	1/1:2,15:17:42.14:1420,42,0	1/1:0,24:24:66.18:2217,66,0	1/1:8,17:25:17.76:592,18,0	0/0:24,0:24:72.25:0,72,3702	0/0:17,0:17:51.18:0,51,2943	0/0:33,0:33:96.32:0,96,5138	0/0:30,0:30:90.31:0,90,5043	0/0:29,0:29:84.29:0,84,4688	0/0:34,0:34:99:0,102,5487	0/0:6,0:6:18.03:0,18,811
chr10	21709336	.	C	CA	1267.39	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-6.795;DP=600;FS=6.674;HRun=9;HaplotypeScore=55.3497;InbreedingCoeff=0.9610;MQ=70.03;MQ0=0;MQRankSum=0.246;QD=26.40;ReadPosRankSum=1.070;VQSLOD=4.2475;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,1:23:29.81:0,30,488	0/0:11,0:12:35.03:0,35,292	0/0:10,0:10:8.98:0,9,76	0/0:9,0:9:14.55:0,15,108	1/1:3,22:27:71.86:758,72,0	0/0:27,0:27:71.95:0,72,619	0/0:22,0:22:59.94:0,60,508	0/0:30,0:30:80.97:0,81,700	0/0:16,0:16:32.96:0,33,282	0/0:26,0:26:62.96:0,63,547	0/0:27,0:27:68.97:0,69,596	0/0:13,0:13:38.98:0,39,334	0/0:31,0:32:89.02:0,89,761	0/0:31,0:31:86.98:0,87,755	0/0:27,0:27:74.96:0,75,648	0/0:27,0:27:74.97:0,75,651	0/0:17,0:17:38.94:0,39,330	0/0:22,0:22:62.89:0,63,535	0/0:14,0:14:32.89:0,33,277	0/0:36,0:36:95.95:0,96,830	0/0:15,0:15:44.98:0,45,388	1/1:1,20:21:57.15:631,57,0	0/0:20,0:20:53.91:0,54,456	0/0:10,0:10:29.99:0,30,260	0/0:15,0:15:41.97:0,42,361	0/0:25,0:25:39.94:0,40,521	0/0:28,0:27:68.94:0,69,595	0/0:17,0:18:47:0,47,396
chr10	21709877	.	GT	G	9364.33	PASS	AB=1.000;AC=51;AF=0.911;AN=56;BaseQRankSum=2.749;DP=521;FS=0.882;HRun=10;HaplotypeScore=60.9755;InbreedingCoeff=0.6994;MQ=66.79;MQ0=0;MQRankSum=-1.300;QD=18.65;ReadPosRankSum=1.445;VQSLOD=5.6714;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,19:21:50.99:443,51,0	1/1:2,9:11:23.99:208,24,0	0/1:8,0:7:11.44:11,0,82	0/0:5,0:5:6.01:0,6,64	1/1:1,0:28:50.92:150,51,0	1/1:4,22:26:65.97:573,66,0	1/1:1,14:15:32.99:286,33,0	1/1:8,0:39:60.09:179,60,0	1/1:0,20:20:59.99:521,60,0	1/1:1,19:20:59.64:500,60,0	1/1:1,18:19:47.97:417,48,0	1/1:2,22:24:29.78:373,30,0	1/1:2,23:25:62.98:547,63,0	1/1:6,21:27:62.96:547,63,0	0/0:14,0:14:36.10:0,36,398	1/1:2,18:20:50.99:443,51,0	1/1:2,14:16:8.80:305,9,0	1/1:1,3:4:9:78,9,0	1/1:3,13:16:38.96:331,39,0	1/1:1,12:13:35.99:313,36,0	1/1:1,8:9:17.99:155,18,0	1/1:0,0:13:26.48:78,26,0	1/1:2,18:20:44.82:391,45,0	1/1:1,11:12:29.99:260,30,0	1/1:3,19:22:59.98:519,60,0	1/1:2,28:30:86.73:740,87,0	1/1:3,33:37:98.01:839,98,0	1/1:0,7:7:18:156,18,0
chr10	21710284	.	GAATT	G	10809.24	PASS	AB=0.923;AC=23;AF=0.411;AN=56;BaseQRankSum=9.570;DP=593;FS=0.000;HRun=0;HaplotypeScore=103.6375;InbreedingCoeff=0.9241;MQ=70.07;MQ0=0;MQRankSum=-1.240;QD=39.59;ReadPosRankSum=2.877;VQSLOD=4.5617;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:45.15:0,45,1150	0/0:9,0:9:24.08:0,24,617	0/0:8,0:8:24.08:0,24,594	0/0:8,0:8:24.08:0,24,592	0/0:22,0:22:66.23:0,66,1728	1/1:0,22:22:63.22:1146,63,0	1/1:0,10:10:30.10:546,30,0	0/0:35,0:35:84.29:0,84,2182	1/1:3,24:27:66.23:1183,66,0	1/1:2,31:33:93.32:1681,93,0	1/1:1,20:21:57.19:984,57,0	1/1:2,19:21:48.16:855,48,0	1/1:3,17:20:39.13:692,39,0	1/1:0,25:25:63.22:1128,63,0	0/0:30,0:30:87.30:0,87,2280	0/0:28,0:28:84.29:0,84,2176	0/0:17,0:17:51.18:0,51,1322	0/0:21,0:21:51.09:0,51,1185	0/0:15,0:15:42.14:0,42,1068	0/0:25,0:25:66.23:0,66,1729	0/0:13,0:13:39.13:0,39,1011	0/0:20,0:20:57.20:0,57,1483	1/1:1,21:22:60.20:1039,60,0	1/1:1,13:14:30.10:546,30,0	1/1:0,22:22:54.18:948,54,0	0/1:33,3:36:61.38:61,0,2284	0/0:46,0:45:99:0,135,3418	0/0:6,0:6:18.03:0,18,402
chr10	21711482	.	GGTGTGT	G	1318.95	PASS	AB=0.771;AC=22;AF=0.423;AN=52;BaseQRankSum=5.509;DP=610;FS=11.500;HRun=0;HaplotypeScore=131.6914;InbreedingCoeff=-0.0031;MQ=70.80;MQ0=13;MQRankSum=-3.508;QD=4.16;ReadPosRankSum=-2.576;VQSLOD=1.4646;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:39:20.46:0,20,191	0/1:3,0:7:12.91:36,0,13	./.	0/0:30,0:22:0:0,0,0	0/0:22,0:30:12.41:0,12,292	1/1:8,4:13:5.38:69,5,0	0/0:16,6:19:4.98:0,5,23	./.	1/1:4,8:12:5.39:43,5,0	0/0:15,0:16:8.54:0,9,50	0/1:14,0:17:25.28:36,0,25	0/1:32,0:32:55.32:55,0,59	0/1:14,11:25:7.54:105,0,8	0/1:13,8:22:12.88:93,0,13	0/0:25,0:27:35.21:0,35,749	0/1:12,0:20:15.91:171,0,16	0/1:20,0:24:32.89:33,0,36	1/1:8,0:11:11.87:140,12,0	0/0:16,0:14:6.67:0,7,23	0/1:13,0:20:29.96:30,0,61	0/0:36,0:34:13.92:0,14,97	0/0:20,0:19:23.24:0,23,461	0/1:15,0:16:19.22:77,0,19	0/1:13,4:16:7.17:14,0,7	0/1:15,11:27:2.04:182,0,2	0/1:11,0:20:20.93:186,0,21	1/1:14,0:20:9.03:126,9,0	1/1:4,0:8:6.02:84,6,0
chr10	21711581	.	AAG	A	869.88	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.073;DP=576;FS=12.649;HRun=0;HaplotypeScore=90.9595;InbreedingCoeff=0.8486;MQ=88.32;MQ0=0;MQRankSum=-3.584;QD=32.22;ReadPosRankSum=0.868;VQSLOD=4.7733;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,24:27:69.19:965,69,0	0/0:11,0:11:33.11:0,33,605	0/0:16,0:16:28.74:0,29,598	0/0:27,0:27:75.09:0,75,1272	0/0:29,0:29:84.27:0,84,1487	0/0:21,0:21:60.21:0,60,1094	0/0:13,0:13:39.13:0,39,706	0/0:35,0:35:99:0,102,1739	0/0:18,0:18:51.17:0,51,934	0/0:24,0:24:69.23:0,69,1238	0/0:23,0:23:69.21:0,69,1204	0/0:22,0:22:60.19:0,60,1070	0/0:16,0:16:45.15:0,45,824	0/0:15,0:15:45.14:0,45,795	0/0:33,0:33:96.33:0,96,1759	0/0:28,0:28:75.24:0,75,1345	0/0:20,0:19:57.20:0,57,1043	0/0:8,0:8:24.08:0,24,439	0/0:16,0:16:48.16:0,48,840	0/0:31,0:31:90.31:0,90,1625	0/0:14,0:14:39.13:0,39,715	0/0:19,0:19:57.18:0,57,996	0/0:21,0:21:63.22:0,63,1139	0/0:17,0:17:48.16:0,48,879	0/0:28,0:28:84.27:0,84,1492	0/0:20,0:20:57.20:0,57,1040	0/0:23,0:23:57.07:0,57,971	0/0:1,0:1:3.01:0,3,55
chr10	21712024	.	TC	T	3049.84	PASS	AB=0.975;AC=18;AF=0.321;AN=56;BaseQRankSum=12.388;DP=611;FS=0.732;HRun=1;HaplotypeScore=106.6572;InbreedingCoeff=0.8744;MQ=68.16;MQ0=0;MQRankSum=0.083;QD=14.95;ReadPosRankSum=0.497;VQSLOD=3.3371;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:50:0,50,332	1/1:0,9:9:17.93:152,18,0	0/0:12,0:9:21.05:0,21,235	0/0:16,0:16:30.32:0,30,341	1/1:3,0:31:37.76:245,38,0	0/0:27,0:27:71.67:0,72,322	0/0:14,0:14:32.48:0,32,151	0/0:40,0:40:79.42:0,79,333	0/0:17,0:17:41.18:0,41,190	0/0:29,0:29:60.42:0,60,243	0/0:33,0:33:71.21:0,71,343	0/1:18,1:19:1.50:2,0,158	0/0:20,0:20:43.30:0,43,194	0/0:23,0:23:45.54:0,46,214	0/0:21,0:21:63:0,63,724	1/1:3,23:26:60.03:545,60,0	1/1:3,23:26:60.01:539,60,0	1/1:2,17:19:50.98:454,51,0	1/1:3,13:16:39.47:346,39,0	1/1:3,28:31:80.93:717,81,0	1/1:1,7:8:18.01:163,18,0	0/1:4,0:19:3.80:93,0,4	0/0:27,0:27:65.89:0,66,307	0/0:13,0:13:5.93:0,6,115	0/0:25,0:25:47.08:0,47,204	0/0:30,0:30:64.21:0,64,266	0/0:17,0:16:38.38:0,38,179	0/0:11,0:11:31.01:0,31,147
chr10	21712339	.	G	GTTT	5997.47	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=8.618;DP=540;FS=7.346;HRun=7;HaplotypeScore=112.0934;InbreedingCoeff=0.9484;MQ=70.56;MQ0=3;MQRankSum=-6.225;QD=35.28;ReadPosRankSum=-1.867;VQSLOD=3.1156;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:87.23:0,87,1150	1/1:5,0:5:12.04:145,12,0	0/0:33,0:16:5.35:0,5,185	0/0:17,0:6:2.61:0,3,34	0/0:39,0:39:99:0,114,1523	0/0:24,0:24:72.24:0,72,982	0/0:11,0:11:33.11:0,33,447	1/1:19,0:24:63.13:771,63,0	0/0:13,0:13:36.12:0,36,491	0/0:25,0:25:60.15:0,60,797	0/0:32,0:32:87.23:0,87,1131	0/0:22,0:22:60.17:0,60,786	0/0:23,0:23:60.17:0,60,801	0/0:19,0:19:57.19:0,57,777	0/0:19,0:19:48.15:0,48,655	1/1:14,0:14:33.10:400,33,0	1/1:11,0:11:27.08:328,27,0	1/1:12,0:13:30.09:367,30,0	1/1:14,0:15:36.11:435,36,0	1/1:24,0:25:66.20:816,66,0	1/1:5,0:6:15.05:189,15,0	0/0:9,0:9:24.07:0,24,328	0/0:17,0:17:42.12:0,42,571	0/0:12,0:12:30.10:0,30,409	0/0:20,0:20:57.19:0,57,778	1/1:5,18:24:19.23:1030,19,0	1/1:4,16:23:57.20:1122,57,0	1/1:5,5:10:24.02:394,24,0
chr10	21712340	.	T	TTTTC	9217.14	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=1.491;DP=552;FS=8.651;HRun=0;HaplotypeScore=116.3329;InbreedingCoeff=0.9067;MQ=70.82;MQ0=4;MQRankSum=-8.717;QD=51.21;ReadPosRankSum=-1.752;VQSLOD=5.1404;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:93.29:0,93,1683	1/1:0,5:5:12.04:311,12,0	0/0:37,0:18:26.46:0,26,353	0/0:19,0:6:9.15:0,9,94	0/0:39,0:39:99:0,117,2154	0/0:24,0:24:72.25:0,72,1366	0/0:11,0:11:33.11:0,33,603	1/1:12,18:30:82.23:1976,82,0	0/0:13,0:13:36.12:0,36,683	0/0:25,0:25:63.21:0,63,1157	0/0:31,0:31:90.30:0,90,1658	0/0:22,0:22:60.21:0,60,1125	0/0:23,0:23:63.20:0,63,1154	0/0:19,0:19:57.20:0,57,1082	0/0:19,0:19:51.17:0,51,937	1/1:0,14:14:33.11:855,33,0	1/1:2,10:12:30.10:777,30,0	1/1:3,11:14:30.08:760,30,0	1/1:8,11:19:45.15:1121,45,0	1/1:2,24:26:69.24:1742,69,0	1/1:2,4:6:15.05:382,15,0	0/0:9,0:9:27.08:0,27,481	0/0:17,0:17:48.15:0,48,850	0/0:12,0:12:30.10:0,30,570	0/0:20,0:20:57.20:0,57,1082	0/1:21,0:21:22.57:514,0,23	1/1:22,0:23:19.13:596,19,0	1/1:10,0:10:18.97:184,19,0
chr10	21712900	.	T	TA	3969.71	PASS	AB=0.785;AC=17;AF=0.304;AN=56;BaseQRankSum=-8.959;DP=593;FS=4.585;HRun=9;HaplotypeScore=89.4829;InbreedingCoeff=0.7248;MQ=73.63;MQ0=0;MQRankSum=-1.267;QD=22.43;ReadPosRankSum=-1.267;VQSLOD=3.7668;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:50.94:0,51,436	1/1:0,7:7:20.92:202,21,0	0/0:16,1:16:1.18:0,1,122	0/0:9,0:8:18.46:0,18,157	0/0:38,0:38:86.44:0,86,683	0/0:22,0:22:54.34:0,54,450	0/0:15,0:15:41.98:0,42,364	1/1:6,26:32:75.16:808,75,0	0/0:18,0:18:41.76:0,42,334	0/0:36,0:36:95.87:0,96,831	0/0:17,0:17:44.86:0,45,369	0/0:26,0:26:65.78:0,66,548	0/0:25,0:25:53.68:0,54,440	0/1:11,1:12:9.23:9,0,151	0/0:27,0:27:71.98:0,72,625	0/1:7,20:27:14.83:534,0,15	1/1:1,15:16:42.11:464,42,0	1/1:2,10:12:24.06:265,24,0	1/1:3,19:22:51.20:605,51,0	1/1:7,23:31:65.12:736,65,0	1/1:1,11:12:30.08:332,30,0	0/0:18,0:18:50.78:0,51,408	0/0:15,0:15:29.75:0,30,237	0/0:18,0:18:35.80:0,36,305	0/0:24,0:24:56.61:0,57,452	0/0:31,0:31:77.94:0,78,668	0/0:33,0:33:80.93:0,81,694	0/1:5,1:6:15.18:15,0,112
chr10	21712943	.	G	GTGATGATGA	25484.77	PASS	AB=0.797;AC=44;AF=0.786;AN=56;BaseQRankSum=-1.242;DP=695;FS=1.746;HRun=0;HaplotypeScore=214.2908;InbreedingCoeff=0.6587;MQ=57.56;MQ0=5;MQRankSum=-10.701;QD=42.69;ReadPosRankSum=-2.981;VQSLOD=4.2745;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:20:3.01:114,3,0	1/1:3,0:12:24.08:896,24,0	0/0:23,0:17:6.02:0,6,84	0/0:18,0:15:14.60:0,15,245	1/1:26,0:40:18.06:679,18,0	1/1:17,18:36:60.21:2727,60,0	1/1:17,3:21:21.07:954,21,0	1/1:41,0:37:33.11:1006,33,0	0/1:11,13:27:49.73:1330,0,50	1/1:22,15:37:66.23:2663,66,0	1/1:9,4:14:12.04:545,12,0	1/1:15,9:26:24.08:1091,24,0	1/1:11,17:30:48.16:2128,48,0	1/1:8,13:21:39.13:1769,39,0	0/0:27,0:26:51.18:0,51,1408	1/1:23,0:37:57.20:2096,57,0	1/1:19,0:21:6.02:235,6,0	1/1:10,0:11:6.02:183,6,0	1/1:20,0:24:26.11:792,26,0	1/1:24,1:35:60.14:1894,60,0	1/1:11,0:13:15.03:491,15,0	1/1:14,0:21:18.06:704,18,0	1/1:14,9:24:21.07:954,21,0	1/1:21,4:26:8.74:381,9,0	1/1:14,13:29:39.13:1773,39,0	0/1:28,1:29:82.40:82,0,1231	0/0:26,0:26:66.20:0,66,1689	0/0:4,0:4:9.03:0,9,248
chr10	21712952	.	A	ATGATGATGATGATGATGG	15426.28	PASS	AB=1.000;AC=28;AF=0.500;AN=56;BaseQRankSum=15.298;DP=715;FS=13.233;HRun=0;HaplotypeScore=358.0290;InbreedingCoeff=-0.1798;MQ=56.09;MQ0=5;MQRankSum=-14.707;QD=26.37;ReadPosRankSum=9.543;VQSLOD=0.7318;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:8,8:25:8.99:530,9,0	1/1:12,0:12:24.08:794,24,0	0/0:25,0:19:21.02:0,21,273	0/0:20,0:17:24.04:0,24,505	0/1:43,0:43:99:921,0,109	0/1:39,0:39:68.68:909,0,69	0/1:26,0:25:89.82:310,0,90	0/1:38,0:33:99:999,0,177	0/1:28,0:28:99:438,0,196	0/1:37,0:37:37.75:1022,0,38	1/1:13,0:13:12.04:196,12,0	0/1:26,0:26:37.85:404,0,38	1/1:31,0:31:4.22:783,4,0	1/1:22,0:22:39.13:626,39,0	0/0:25,0:24:63.16:0,63,2583	1/1:36,0:36:14.22:1795,14,0	0/1:19,0:19:67.46:716,0,67	0/1:10,0:10:42.91:339,0,43	0/1:23,0:23:99:753,0,150	0/1:42,0:41:99:1442,0,141	0/1:12,0:12:9.55:305,0,10	0/1:20,0:20:26.89:958,0,27	0/1:25,0:25:43.38:312,0,43	0/1:27,0:27:66.99:275,0,67	0/1:31,0:31:26.78:600,0,27	0/0:26,0:26:11.67:0,12,2253	0/0:29,0:29:78.19:0,78,3039	0/0:4,0:4:12.03:0,12,469
chr10	21713129	.	GA	G	9384.63	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=7.794;DP=774;FS=8.630;HRun=3;HaplotypeScore=91.1188;InbreedingCoeff=0.9997;MQ=88.08;MQ0=0;MQRankSum=-4.145;QD=33.04;ReadPosRankSum=3.281;VQSLOD=4.9027;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,141,1988	0/0:19,0:19:57.19:0,57,819	0/0:25,0:25:65.76:0,66,869	0/0:31,0:31:78.19:0,78,1047	0/0:36,0:36:99:0,102,1448	1/1:0,29:29:84.26:1041,84,0	1/1:1,28:29:72.23:893,72,0	0/0:32,0:32:93.25:0,93,1269	1/1:1,28:29:84.26:1041,84,0	1/1:1,27:28:81.23:989,81,0	1/1:1,19:20:51.16:630,51,0	1/1:1,29:30:72.23:892,72,0	1/1:0,21:21:57.18:706,57,0	1/1:0,26:26:72.23:890,72,0	0/0:40,0:40:99:0,120,1727	0/0:39,0:39:99:0,111,1578	0/0:29,0:29:78.26:0,78,1121	0/0:16,0:16:42.14:0,42,605	0/0:17,0:17:48.14:0,48,658	0/0:26,0:26:78.24:0,78,1088	0/0:20,0:20:60.20:0,60,861	0/0:30,0:30:87.27:0,87,1207	1/1:0,28:28:66.04:818,66,0	1/1:1,24:25:69.22:853,69,0	1/1:0,19:19:51.16:632,51,0	0/0:37,0:37:99:0,105,1505	0/0:37,0:37:99:0,111,1597	0/0:8,0:8:24.08:0,24,346
chr10	21714146	.	GA	G	2099.24	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=2.842;DP=619;FS=2.459;HRun=1;HaplotypeScore=74.4867;InbreedingCoeff=0.9977;MQ=87.61;MQ0=0;MQRankSum=-1.425;QD=38.87;ReadPosRankSum=0.543;VQSLOD=4.2745;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:96.30:0,96,1492	0/0:15,0:15:45.11:0,45,668	0/0:23,0:23:68.55:0,69,968	0/0:20,0:20:56.51:0,57,837	1/1:0,38:38:99:1550,111,0	0/0:26,0:26:78.27:0,78,1246	0/0:13,0:13:39.13:0,39,623	0/0:27,0:27:75.23:0,75,1134	0/0:11,0:11:33.11:0,33,525	0/0:28,0:28:84.27:0,84,1299	0/0:21,0:21:60.20:0,60,957	0/0:30,0:30:90.29:0,90,1412	0/0:15,0:15:45.15:0,45,716	0/0:18,0:18:54.17:0,54,837	0/0:17,0:17:51.17:0,51,815	0/0:31,0:31:93.29:0,93,1441	0/0:30,0:30:90.30:0,90,1415	0/0:15,0:15:42.11:0,42,639	0/0:15,0:15:45.15:0,45,720	0/0:23,0:23:66.21:0,66,1031	0/0:21,0:21:60.19:0,60,935	1/1:0,16:16:48.16:671,48,0	0/0:26,0:26:75.18:0,75,1120	0/0:14,0:14:42.14:0,42,666	0/0:24,0:24:72.24:0,72,1138	0/0:22,0:22:66.23:0,66,1055	0/0:40,0:40:99:0,120,1917	0/0:7,0:7:21.07:0,21,335
chr10	21714186	.	A	AT	924.05	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.176;DP=603;FS=0.714;HRun=6;HaplotypeScore=75.6969;InbreedingCoeff=0.9909;MQ=75.40;MQ0=0;MQRankSum=-0.432;QD=29.81;ReadPosRankSum=2.296;VQSLOD=4.3472;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,30:31:81.26:1019,81,0	0/0:10,0:10:30.07:0,30,306	0/0:13,0:13:20.78:0,21,266	0/0:9,0:9:23.59:0,24,206	0/0:38,0:38:93.17:0,93,936	0/0:23,0:23:60.13:0,60,611	0/0:16,0:16:45.08:0,45,451	0/0:31,0:31:75.15:0,75,756	0/0:9,0:9:24.05:0,24,245	0/0:34,0:34:87.19:0,87,884	0/0:20,0:20:54.12:0,54,551	0/0:22,0:22:66.15:0,66,673	0/0:20,0:20:60.14:0,60,612	0/0:23,0:23:57.19:0,57,607	0/0:16,0:16:45.10:0,45,459	0/0:26,0:26:78.16:0,78,788	0/0:22,0:22:63.14:0,63,643	0/0:16,0:16:45.10:0,45,459	0/0:20,0:20:57.13:0,57,582	0/0:24,0:24:69.15:0,69,704	0/0:16,0:16:45.08:0,45,452	0/0:23,0:23:60.12:0,60,605	0/0:29,0:29:81.16:0,81,819	0/0:14,0:14:42.10:0,42,428	0/0:22,0:22:63.13:0,63,637	0/0:30,0:30:72.15:0,72,734	0/0:29,0:29:75.15:0,75,758	0/0:17,0:17:48.11:0,48,487
chr10	21714531	.	GGA	G	4192.25	PASS	AB=0.997;AC=28;AF=0.500;AN=56;BaseQRankSum=10.037;DP=658;FS=11.787;HRun=0;HaplotypeScore=128.7061;InbreedingCoeff=0.1568;MQ=74.71;MQ0=2;MQRankSum=-1.151;QD=9.21;ReadPosRankSum=6.543;VQSLOD=2.2022;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,100,595	0/1:10,0:10:24.21:24,0,52	0/0:22,0:20:55.78:0,56,898	0/0:15,0:13:5.36:0,5,274	1/1:2,33:35:73.88:1391,74,0	0/1:21,0:21:3.11:108,0,3	0/1:18,0:18:56.56:57,0,105	0/0:26,0:26:72.20:0,72,1221	0/1:18,0:18:34.33:68,0,34	0/1:27,0:27:27.28:112,0,27	1/1:26,0:25:37.46:199,37,0	0/1:28,0:28:13.99:148,0,14	1/1:23,0:23:27.13:155,27,0	0/1:26,0:26:44.04:122,0,44	0/0:24,0:24:72.22:0,72,1374	1/1:26,0:26:53.61:190,54,0	0/1:26,0:26:64.84:87,0,65	1/1:20,0:20:16.24:109,16,0	0/1:22,1:23:38.54:87,0,39	0/1:24,0:24:26.99:129,0,27	0/1:18,0:18:9.72:79,0,10	1/1:1,17:18:47.14:790,47,0	1/1:23,0:23:22.59:127,23,0	0/1:24,0:23:72.92:87,0,73	1/1:21,0:21:18.81:124,19,0	0/0:35,0:35:99:0,105,1822	0/0:32,0:32:96.18:0,96,1684	0/0:12,0:12:33.11:0,33,666
chr10	21714532	.	GAA	G	11736.07	PASS	AB=1.000;AC=41;AF=0.732;AN=56;BaseQRankSum=-3.754;DP=660;FS=5.017;HRun=10;HaplotypeScore=104.1509;InbreedingCoeff=0.9444;MQ=75.26;MQ0=2;MQRankSum=-2.652;QD=24.92;ReadPosRankSum=3.120;VQSLOD=4.6519;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:2,0:36:79.85:0,80,275	1/1:3,7:10:18.04:201,18,0	0/0:23,0:20:59.54:0,60,792	0/1:17,0:14:0.43:0,0,269	1/1:35,0:35:11.21:540,11,0	1/1:2,19:21:54.14:602,54,0	1/1:6,12:18:36.07:395,36,0	0/0:26,0:26:57.18:0,57,871	1/1:3,15:18:42.10:468,42,0	1/1:2,24:26:72.19:802,72,0	1/1:1,26:26:42.85:709,43,0	1/1:3,25:28:68.94:768,69,0	1/1:1,22:23:63.17:702,63,0	1/1:4,22:26:60.15:668,60,0	0/0:23,0:23:66.23:0,66,1048	1/1:0,26:26:72.19:803,72,0	1/1:3,20:26:42.43:585,42,0	1/1:1,19:20:51.14:569,51,0	1/1:5,18:23:55.93:604,56,0	1/1:1,22:23:60.15:669,60,0	1/1:2,16:18:45.12:502,45,0	1/1:18,0:18:18.45:310,18,0	1/1:2,21:23:60.16:669,60,0	1/1:5,19:23:51.12:569,51,0	1/1:1,20:21:54.14:602,54,0	0/0:35,0:37:99:0,99,1516	0/0:31,0:32:89.78:0,90,1361	0/0:12,0:12:33.11:0,33,524
chr10	21716163	.	A	AAAAC	5118.71	PASS	AB=0.611;AC=12;AF=0.214;AN=56;BaseQRankSum=-10.478;DP=623;FS=12.508;HRun=0;HaplotypeScore=111.1772;InbreedingCoeff=0.8333;MQ=62.17;MQ0=2;MQRankSum=1.041;QD=34.35;ReadPosRankSum=0.121;VQSLOD=4.4832;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:23:44.10:0,44,328	1/1:3,8:11:18.06:434,18,0	0/0:22,0:17:24.08:0,24,369	0/0:18,0:17:18.06:0,18,264	0/0:10,0:25:50.40:0,50,421	0/0:24,0:24:51.08:0,51,734	0/0:8,0:8:18.06:0,18,290	0/0:33,0:33:36.11:0,36,535	0/0:14,0:14:24.07:0,24,365	0/0:30,0:30:69.24:0,69,1103	0/0:27,0:27:66.23:0,66,1061	0/0:23,0:23:42.14:0,42,677	0/0:32,0:32:54.18:0,54,849	0/0:23,0:23:57.19:0,57,889	0/0:25,0:25:60.20:0,60,943	1/1:6,10:16:23.86:578,24,0	1/1:6,16:23:35.88:867,36,0	1/1:11,18:32:45.83:1129,46,0	1/1:16,7:25:31.31:559,31,0	0/1:12,13:26:0.17:1000,0,0	0/1:4,11:16:21.24:552,0,21	0/0:5,0:14:24.28:0,24,201	0/0:25,0:25:60.20:0,60,944	0/0:19,0:19:27.08:0,27,412	0/0:22,0:22:45.15:0,45,715	0/0:26,0:26:57.17:0,57,870	0/0:34,0:34:75.26:0,75,1203	0/0:7,0:7:12.04:0,12,193
chr10	21716206	.	T	TAAA	1411.59	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=7.923;DP=633;FS=5.206;HRun=9;HaplotypeScore=117.2431;InbreedingCoeff=0.9939;MQ=77.28;MQ0=0;MQRankSum=-5.431;QD=20.46;ReadPosRankSum=-3.292;VQSLOD=1.1316;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:8,0:25:16.53:35,17,0	0/0:9,0:9:27.09:0,27,341	0/0:30,0:29:24.78:0,25,553	0/0:15,0:15:23.97:0,24,281	1/1:12,14:29:56.24:843,56,0	0/0:27,0:27:78.25:0,78,985	0/0:14,0:14:41.15:0,41,485	0/0:25,0:25:63.18:0,63,796	0/0:22,0:22:60.17:0,60,758	0/0:27,0:27:72.21:0,72,909	0/0:26,0:26:66.15:0,66,804	0/0:23,0:24:58.74:0,59,755	0/0:21,0:21:54.11:0,54,665	0/0:20,0:20:57.14:0,57,692	0/0:21,0:21:54.15:0,54,682	0/0:16,0:16:42.13:0,42,531	0/0:27,0:27:60.18:0,60,758	0/0:31,0:31:66.63:0,67,817	0/0:27,0:26:72.18:0,72,883	0/0:29,0:29:78.22:0,78,986	0/0:13,0:13:36.09:0,36,440	1/1:2,9:15:42.06:675,42,0	0/0:23,0:23:57.15:0,57,720	0/0:18,0:18:54.17:0,54,681	0/0:19,0:19:54.17:0,54,682	0/0:30,0:30:41.86:0,42,1011	0/0:31,0:33:93.11:0,93,1105	0/0:14,0:14:30.06:0,30,377
chr10	21716806	.	AATATATAT	A	1292.24	PASS	AC=6;AF=0.273;AN=22;BaseQRankSum=1.100;DP=209;FS=0.000;HRun=0;HaplotypeScore=74.2102;InbreedingCoeff=0.6864;MQ=75.76;MQ0=4;MQRankSum=-3.421;QD=28.72;ReadPosRankSum=2.347;VQSLOD=3.1248;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:19:8.90:0,9,85	./.	./.	./.	./.	0/0:2,0:2:3.01:0,3,49	./.	0/0:36,0:36:51.13:0,51,990	./.	./.	./.	./.	./.	./.	0/0:9,0:10:9.03:0,9,316	./.	0/0:7,0:8:3.01:0,3,105	0/0:12,0:14:12.04:0,12,395	0/0:6,0:6:6.02:0,6,145	./.	./.	./.	./.	./.	0/0:3,0:3:3.01:0,3,100	1/1:6,7:13:18.21:405,18,0	1/1:11,11:24:15.32:538,15,0	1/1:0,8:8:18.06:458,18,0
chr10	21716816	.	T	TACACACAC	2934.03	PASS	AC=2;AF=0.050;AN=40;BaseQRankSum=-6.195;DP=175;FS=1.728;HRun=0;HaplotypeScore=79.1614;InbreedingCoeff=0.2876;MQ=51.42;MQ0=7;MQRankSum=-1.392;QD=77.21;ReadPosRankSum=-0.112;VQSLOD=3.4935;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:0.66:0,1,2	./.	0/0:4,0:2:3.01:0,3,56	0/0:9,0:1:3.01:0,3,73	0/0:3,0:3:3.01:0,3,87	0/0:2,0:2:6:0,6,110	./.	1/1:15,17:38:99:3022,105,0	./.	0/0:3,0:3:3.01:0,3,31	0/0:2,0:2:3.01:0,3,50	0/0:2,0:2:5.99:0,6,50	./.	0/0:2,0:2:3:0,3,25	0/0:5,0:5:12.04:0,12,315	./.	0/0:11,0:9:2.94:0,3,18	0/0:14,0:13:15.03:0,15,258	0/0:7,0:6:12.04:0,12,255	0/0:2,0:2:3:0,3,25	0/0:1,0:1:1.82:0,2,5	./.	./.	./.	0/0:2,0:2:6.02:0,6,160	0/0:13,0:13:32.14:0,32,460	0/0:30,0:29:37.49:0,37,553	0/0:8,0:8:18.06:0,18,314
chr10	21716838	.	C	CAT	4773.43	PASS	AB=0.879;AC=43;AF=0.827;AN=52;BaseQRankSum=-0.481;DP=259;FS=0.000;HRun=0;HaplotypeScore=55.3294;InbreedingCoeff=0.5359;MQ=47.06;MQ0=7;MQRankSum=-1.250;QD=21.41;ReadPosRankSum=0.320;VQSLOD=4.6349;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:6,7:14:0:0,0,0	./.	./.	0/0:15,0:2:3:0,3,28	0/1:5,0:5:0:0,0,0	1/1:3,0:3:9:95,9,0	1/1:3,0:3:9.02:120,9,0	1/1:32,0:31:69.54:843,70,0	1/1:5,1:6:18.06:274,18,0	1/1:7,0:7:16.54:198,17,0	1/1:3,0:3:6.01:72,6,0	1/1:1,0:1:3.01:47,3,0	1/1:6,0:6:15.02:191,15,0	1/1:2,0:2:5.99:48,6,0	0/0:9,0:9:27.06:0,27,329	1/1:4,0:3:9:86,9,0	1/1:2,18:18:2.97:20,3,0	1/1:4,7:12:9.02:122,9,0	1/1:2,10:11:30.09:438,30,0	1/1:3,0:3:9.03:143,9,0	1/1:8,0:8:18.06:283,18,0	0/1:3,0:3:0:0,0,0	0/0:0,4:4:0:0,0,0	1/1:5,0:5:6.02:93,6,0	1/1:7,0:7:18.06:291,18,0	1/1:16,0:16:35.87:346,36,0	1/1:40,0:39:80.81:930,81,0	1/1:10,0:10:17.89:133,18,0
chr10	21716967	.	A	AGGTTGTGG	1147.03	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=0.414;DP=503;FS=1.239;HRun=0;HaplotypeScore=123.1607;InbreedingCoeff=0.7816;MQ=78.44;MQ0=0;MQRankSum=-5.427;QD=37.00;ReadPosRankSum=-0.150;VQSLOD=3.4504;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,11:31:33.11:1241,33,0	0/0:3,0:3:3.01:0,3,76	0/0:16,0:16:12.04:0,12,272	0/0:24,0:24:27.09:0,27,598	0/0:12,0:12:21.07:0,21,506	0/0:13,0:13:27.09:0,27,686	0/0:25,0:25:54.16:0,54,1239	0/0:36,0:36:60.19:0,60,1280	0/0:14,0:14:33.11:0,33,839	0/0:11,0:11:12.04:0,12,305	0/0:10,0:10:21.05:0,21,432	0/0:16,0:16:27.08:0,27,608	0/0:19,0:19:39.13:0,39,956	0/0:14,0:14:24.08:0,24,610	0/0:25,0:25:51.17:0,51,1296	0/0:17,0:17:33.11:0,33,837	0/0:26,0:26:45.08:0,45,981	0/0:11,0:11:24.08:0,24,578	0/0:18,0:18:33.10:0,33,766	0/0:14,0:14:21.07:0,21,497	0/0:43,0:43:63.21:0,63,1602	0/0:13,0:13:27.09:0,27,686	0/0:10,0:10:18.06:0,18,458	0/0:25,0:25:54.17:0,54,1307	0/0:8,0:8:18.06:0,18,433	0/0:20,0:20:45.15:0,45,1108	0/0:19,0:19:45.15:0,45,1144	0/0:10,0:10:24.08:0,24,574
chr10	21718812	.	CGA	C	2184.54	PASS	AB=0.723;AC=23;AF=0.411;AN=56;BaseQRankSum=5.402;DP=818;DS;FS=1.073;HRun=0;HaplotypeScore=106.1643;InbreedingCoeff=0.5726;MQ=58.41;MQ0=66;MQRankSum=-0.208;QD=8.84;ReadPosRankSum=1.431;VQSLOD=3.3996;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,14:19:8.06:82,8,0	1/1:2,7:9:11.71:137,12,0	0/0:110,0:39:59.75:0,60,822	0/0:250,0:60:76.18:0,76,965	1/1:16,21:36:24.80:394,25,0	0/0:18,0:18:30.10:0,30,500	0/1:18,0:18:7.89:8,0,357	0/0:24,0:24:48.07:0,48,737	0/0:16,0:16:15.05:0,15,251	0/0:19,0:19:48.29:0,48,719	0/0:10,0:10:14.26:0,14,227	0/0:19,0:19:44.53:0,45,751	0/0:22,0:21:28.13:0,28,444	0/0:13,0:13:31.76:0,32,507	0/0:18,0:18:18.05:0,18,301	1/1:16,4:19:12.04:146,12,0	0/1:13,4:17:50.44:129,0,50	0/1:4,5:9:4.16:36,0,4	1/1:6,10:15:0.64:318,1,0	0/1:7,14:21:27.52:156,0,28	1/1:5,7:11:3.01:38,3,0	1/1:8,13:21:18.73:230,19,0	0/0:21,0:21:29.63:0,30,492	0/0:13,0:13:24.08:0,24,401	0/0:18,0:18:39.06:0,39,604	1/1:9,14:22:19.86:524,20,0	1/1:10,4:12:9.03:114,9,0	0/1:2,8:10:7.95:67,0,8
chr10	21718871	.	GAGAGAT	G	1493.28	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=0.384;DP=581;FS=5.425;HRun=0;HaplotypeScore=124.6505;InbreedingCoeff=0.4266;MQ=61.80;MQ0=26;MQRankSum=2.739;QD=8.25;ReadPosRankSum=1.656;VQSLOD=2.1421;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:50.70:0,51,605	0/0:16,0:16:26.30:0,26,282	0/0:33,0:13:26.76:0,27,239	0/0:43,0:12:6.95:0,7,143	0/0:40,0:40:35.53:0,36,429	0/1:18,0:18:44.27:123,0,44	0/1:23,0:23:9.31:9,0,53	0/1:22,0:20:99:162,0,290	0/0:6,16:22:2.43:0,2,13	1/1:20,0:19:16.53:341,17,0	1/1:10,0:10:20.79:174,21,0	0/1:20,0:19:62.25:236,0,62	1/1:20,0:18:1.95:27,2,0	1/1:16,0:16:27.04:300,27,0	0/0:19,0:19:32.84:0,33,284	0/0:21,0:20:35.67:0,36,294	0/0:24,0:23:50.84:0,51,617	0/0:15,0:14:33.51:0,34,399	0/0:20,0:19:53.68:0,54,557	0/0:19,0:18:41.92:0,42,431	0/0:10,0:8:11.95:0,12,92	0/0:20,0:20:28.62:0,29,346	0/1:18,0:18:10.70:82,0,11	0/0:16,0:15:2.99:0,3,24	1/1:14,0:14:5.72:210,6,0	0/0:27,0:25:71.69:0,72,790	0/0:22,0:21:30.22:0,30,259	0/0:6,0:6:17.86:0,18,130
chr10	21718873	.	GAGAT	G	2166.49	PASS	AB=0.855;AC=19;AF=0.352;AN=54;BaseQRankSum=-0.228;DP=568;FS=3.527;HRun=0;HaplotypeScore=108.5483;InbreedingCoeff=0.6994;MQ=62.13;MQ0=26;MQRankSum=3.699;QD=11.52;ReadPosRankSum=1.279;VQSLOD=3.2366;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:50.65:0,51,479	0/0:16,0:16:29.64:0,30,276	0/0:34,0:14:18.15:0,18,229	0/0:43,0:12:6.47:0,6,142	0/0:40,0:40:53.49:0,53,526	0/1:18,0:18:28.75:166,0,29	0/1:5,17:22:15.91:54,0,16	0/1:20,0:18:99:168,0,164	1/1:18,2:20:2.50:10,2,0	1/1:19,0:18:47.34:476,47,0	1/1:9,1:10:21:212,21,0	1/1:19,0:18:29.02:417,29,0	1/1:4,11:13:11.02:54,11,0	1/1:15,0:15:44.64:412,45,0	0/0:17,0:17:32.83:0,33,255	0/0:22,0:21:35.62:0,36,269	0/0:24,0:23:50.55:0,51,506	0/0:14,0:13:33.04:0,33,319	0/0:21,0:20:57.83:0,58,522	0/0:19,0:18:41.92:0,42,430	0/0:12,0:10:17.93:0,18,140	0/0:21,0:21:30.27:0,30,332	1/1:17,0:17:13.56:120,14,0	./.	1/1:13,0:13:32.88:274,33,0	0/0:27,0:25:70.15:0,70,657	0/0:22,0:21:29.72:0,30,255	0/0:6,0:6:17.86:0,18,130
chr10	21718875	.	GAT	G	2116.05	PASS	AB=1.000;AC=21;AF=0.389;AN=54;BaseQRankSum=-0.340;DP=554;FS=0.474;HRun=0;HaplotypeScore=94.8068;InbreedingCoeff=0.8960;MQ=64.42;MQ0=26;MQRankSum=2.882;QD=11.69;ReadPosRankSum=0.699;VQSLOD=3.4503;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:49.07:0,49,430	0/0:15,0:15:28.18:0,28,227	0/0:34,0:14:27.98:0,28,243	0/0:45,0:14:12.44:0,12,188	0/0:38,0:38:50.36:0,50,467	1/1:17,0:17:24.11:197,24,0	1/1:21,0:21:3:27,3,0	1/1:19,0:17:26.72:245,27,0	1/1:18,1:19:2.98:44,3,0	1/1:18,0:17:47.94:422,48,0	1/1:11,0:11:23.97:202,24,0	1/1:18,1:18:50.92:421,51,0	0/1:15,0:13:0.61:25,0,1	1/1:15,0:15:44.63:363,45,0	0/0:17,0:17:32.83:0,33,255	0/0:22,0:21:35.62:0,36,269	0/0:22,0:21:47.57:0,48,438	0/0:12,0:11:29.33:0,29,252	0/0:22,0:21:51.83:0,52,462	0/0:19,0:18:41.92:0,42,397	0/0:12,0:10:17.93:0,18,140	0/0:20,0:20:29.77:0,30,289	1/1:14,1:15:14.68:123,15,0	./.	1/1:11,1:12:32.69:253,33,0	0/0:25,0:23:58.31:0,58,527	0/0:24,0:23:32.72:0,33,278	0/0:7,0:7:20.85:0,21,153
chr10	21719089	.	TACA	T	12415.21	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=17.190;DP=730;FS=2.039;HRun=0;HaplotypeScore=119.4164;InbreedingCoeff=0.9749;MQ=86.12;MQ0=0;MQRankSum=-5.785;QD=48.50;ReadPosRankSum=5.138;VQSLOD=6.7249;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,41:41:99:1863,105,0	1/1:0,12:12:36.12:671,36,0	0/0:33,0:33:99:0,99,2244	0/0:28,0:28:81.28:0,81,1898	0/0:31,0:31:69.24:0,69,1658	0/0:23,0:23:69.24:0,69,1673	0/0:29,0:29:84.25:0,84,1970	0/0:31,0:31:93.32:0,93,2293	0/0:30,0:30:90.31:0,90,2177	0/0:26,0:26:72.25:0,72,1776	0/0:21,0:21:63.22:0,63,1537	0/0:26,0:26:75.24:0,75,1789	0/0:34,0:34:93.32:0,93,2287	0/0:26,0:26:78.27:0,78,1923	0/0:43,0:43:99:0,129,3104	1/1:0,28:28:72.25:1342,72,0	1/1:0,34:34:84.29:1566,84,0	1/1:1,14:15:42.14:771,42,0	1/1:0,14:14:42.14:773,42,0	1/1:0,16:15:39.13:688,39,0	1/1:0,30:30:75.26:1398,75,0	0/0:18,0:18:48.16:0,48,1183	0/0:21,0:21:60.21:0,60,1448	0/0:26,0:26:75.26:0,75,1839	0/0:28,0:28:84.28:0,84,1979	1/1:0,26:26:78.27:1450,78,0	1/1:0,39:38:99:1837,102,0	1/1:0,1:1:3.01:56,3,0
chr10	21720150	.	G	GT	2966.56	PASS	AB=0.788;AC=15;AF=0.268;AN=56;BaseQRankSum=-9.922;DP=653;FS=1.699;HRun=10;HaplotypeScore=77.7292;InbreedingCoeff=0.7043;MQ=79.58;MQ0=1;MQRankSum=-1.261;QD=16.39;ReadPosRankSum=-0.005;VQSLOD=3.9873;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,1:42:66.95:0,67,718	1/1:4,10:14:24.06:256,24,0	0/1:31,0:26:11.25:11,0,205	0/0:32,0:27:35.16:0,35,254	0/0:26,0:26:65.83:0,66,530	0/0:19,0:19:47.92:0,48,393	0/0:24,1:26:32.89:0,33,454	0/0:30,0:32:61.09:0,61,575	0/0:22,0:22:53.88:0,54,440	0/0:22,0:22:33.27:0,33,426	0/0:14,0:15:34.41:0,34,254	0/0:22,0:23:67.91:0,68,538	0/0:20,0:20:44.65:0,45,353	0/0:27,0:27:62.77:0,63,500	0/0:23,1:25:35.97:0,36,491	1/1:0,20:20:57.14:608,57,0	1/1:5,26:31:26.32:678,26,0	1/1:2,17:19:45.11:480,45,0	1/1:9,9:19:6.04:289,6,0	1/1:7,17:24:29.51:505,30,0	0/1:4,14:18:31.83:310,0,32	0/0:18,0:20:51.99:0,52,403	0/0:18,0:18:35.94:0,36,296	0/0:30,0:30:86.73:0,87,690	0/0:15,1:16:9.95:0,10,285	0/0:24,1:25:36.93:0,37,508	0/0:30,1:31:52.02:0,52,627	0/1:3,1:4:19.98:20,0,62
chr10	21725223	.	AT	A	1330.91	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.661;DP=649;FS=0.646;HRun=1;HaplotypeScore=81.6522;InbreedingCoeff=0.9976;MQ=77.88;MQ0=0;MQRankSum=-2.482;QD=34.13;ReadPosRankSum=1.565;VQSLOD=3.5413;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,39:39:99:1426,102,0	0/0:15,0:15:45.15:0,45,704	0/0:16,0:16:43.71:0,44,653	0/0:19,0:19:47.65:0,48,695	0/0:33,0:33:96.30:0,96,1473	0/0:30,0:30:84.29:0,84,1307	0/0:21,0:21:63.20:0,63,960	0/0:30,0:30:90.30:0,90,1386	0/0:18,0:18:54.17:0,54,822	0/0:25,0:25:75.23:0,75,1115	0/0:29,0:29:87.23:0,87,1308	0/0:26,0:26:78.22:0,78,1154	0/0:32,0:32:96.26:0,96,1408	0/0:17,0:17:51.17:0,51,793	0/0:24,0:24:72.20:0,72,1055	0/0:29,0:28:87.28:0,87,1339	0/0:30,0:30:84.28:0,84,1310	0/0:14,0:14:42.14:0,42,649	0/0:26,0:26:78.25:0,78,1178	0/0:27,0:27:81.28:0,81,1267	0/0:14,0:14:39.13:0,39,599	0/0:18,0:18:54.17:0,54,820	0/0:25,0:25:75.24:0,75,1149	0/0:8,0:8:24.04:0,24,348	0/0:21,0:21:63.19:0,63,942	0/0:26,0:26:75.24:0,75,1153	0/0:26,0:26:78.26:0,78,1208	0/0:11,0:11:33.11:0,33,516
chr10	21725444	.	A	ATAAAGTT	3892.65	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-7.958;DP=602;FS=6.102;HRun=0;HaplotypeScore=132.8631;InbreedingCoeff=0.9962;MQ=87.26;MQ0=0;MQRankSum=-7.146;QD=94.94;ReadPosRankSum=-4.891;VQSLOD=3.0757;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,126,3176	0/0:9,0:9:27.09:0,27,675	0/0:28,0:28:77.97:0,78,1728	0/0:18,0:18:51.09:0,51,1161	0/0:25,0:25:75.20:0,75,1916	0/0:24,0:24:69.24:0,69,1761	0/0:29,0:29:81.24:0,81,1963	1/1:7,21:41:99:3893,114,0	0/0:22,0:22:66.20:0,66,1670	0/0:21,0:21:63.20:0,63,1549	0/0:12,0:12:33.11:0,33,845	0/0:25,0:25:75.20:0,75,1735	0/0:25,0:25:69.22:0,69,1764	0/0:22,0:22:60.19:0,60,1502	0/0:31,0:31:90.31:0,90,2349	0/0:26,0:26:72.23:0,72,1789	0/0:21,0:20:63.20:0,63,1605	0/0:14,0:14:39.13:0,39,983	0/0:15,0:15:42.12:0,42,934	0/0:17,0:17:51.16:0,51,1262	0/0:11,0:11:33.09:0,33,814	0/0:12,0:12:36.12:0,36,938	0/0:15,0:15:45.13:0,45,1078	0/0:23,0:23:66.18:0,66,1655	0/0:18,0:18:48.16:0,48,1266	0/0:16,0:16:48.16:0,48,1206	0/0:31,0:31:90.29:0,90,2196	0/0:8,0:8:24.05:0,24,524
chr10	21725830	.	ATTTTTATT	A	2030.41	PASS	AB=1.000;AC=24;AF=0.571;AN=42;BaseQRankSum=-3.329;DP=144;FS=0.000;HRun=0;HaplotypeScore=42.8220;InbreedingCoeff=0.1289;MQ=46.85;MQ0=6;MQRankSum=2.824;QD=20.51;ReadPosRankSum=-0.964;VQSLOD=1.6179;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:4,0:4:10.47:10,0,13	1/1:2,0:3:9.03:170,9,0	0/0:9,0:1:2.04:0,2,6	0/0:21,0:2:4.56:0,5,35	./.	0/0:2,0:2:3.47:0,3,26	1/1:3,0:4:5.16:92,5,0	0/1:35,0:35:92.90:369,0,93	1/1:2,0:2:3.01:74,3,0	1/1:0,3:3:5.85:128,6,0	./.	0/0:1,0:1:3.01:0,3,45	0/1:2,0:2:0.81:19,0,1	0/1:3,0:3:10.98:11,0,25	./.	1/1:2,0:2:6.02:82,6,0	1/1:11,0:11:33.11:588,33,0	1/1:13,0:13:17.12:280,17,0	1/1:2,3:4:5.05:189,5,0	./.	0/0:2,0:1:3.01:0,3,56	./.	./.	1/1:3,0:3:5.07:56,5,0	0/1:5,0:5:37.55:64,0,38	./.	0/1:4,0:4:32.93:33,0,242	0/0:7,0:6:3.01:0,3,128
chr10	21725832	.	T	TTA	1154.75	PASS	AB=0.929;AC=25;AF=0.595;AN=42;BaseQRankSum=-1.871;DP=147;FS=8.428;HRun=0;HaplotypeScore=34.2188;InbreedingCoeff=0.0300;MQ=46.36;MQ0=6;MQRankSum=1.779;QD=11.43;ReadPosRankSum=-1.010;VQSLOD=1.6163;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:4,0:4:7.07:7,0,13	0/1:2,1:3:36.42:77,0,36	0/0:10,0:1:2.80:0,3,13	0/0:21,0:2:4.26:0,4,39	./.	1/1:2,0:2:5.85:49,6,0	1/1:4,0:4:12.04:164,12,0	0/1:34,4:37:99:325,0,623	1/1:1,0:1:3.01:33,3,0	1/1:3,0:3:5.98:50,6,0	./.	1/1:1,0:1:3.01:36,3,0	1/1:2,0:2:6:60,6,0	1/1:3,0:3:8.76:81,9,0	./.	0/1:2,0:2:33.83:34,0,39	0/1:10,1:11:55.68:56,0,232	0/1:13,1:14:19.07:19,0,227	0/1:5,0:4:41.76:66,0,42	./.	0/0:2,0:1:3.01:0,3,45	./.	./.	1/1:2,1:3:6.02:73,6,0	1/1:3,2:5:12.04:164,12,0	./.	0/0:4,0:4:9.03:0,9,132	0/0:7,0:6:3.01:0,3,45
chr10	21725838	.	T	TTA	1145.49	PASS	AB=0.961;AC=29;AF=0.659;AN=44;BaseQRankSum=-1.038;DP=137;FS=0.000;HRun=0;HaplotypeScore=29.3315;InbreedingCoeff=0.1727;MQ=47.44;MQ0=5;MQRankSum=1.079;QD=10.32;ReadPosRankSum=-0.823;VQSLOD=2.8332;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:6,0:6:15.52:49,0,16	1/1:3,0:3:3.40:41,3,0	0/0:9,0:1:1.82:0,2,5	0/1:16,0:2:1.46:1,0,2	./.	1/1:3,0:3:5.96:54,6,0	1/1:4,0:4:11.90:122,12,0	0/1:28,4:30:40.68:260,0,41	1/1:2,0:2:6.02:89,6,0	1/1:3,0:3:5.91:45,6,0	1/1:1,0:1:3.01:40,3,0	1/1:1,0:1:3.01:36,3,0	1/1:1,0:1:3.01:36,3,0	1/1:3,0:3:8.76:82,9,0	./.	0/0:2,0:2:1.55:0,2,4	1/1:12,1:13:5.22:160,5,0	0/1:10,1:11:7.45:42,0,7	0/1:6,0:5:6.26:19,0,6	./.	0/0:2,0:1:2.98:0,3,21	./.	./.	1/1:2,1:3:6.02:74,6,0	1/1:1,2:3:9.03:122,9,0	./.	0/0:4,0:4:6.59:0,7,34	0/0:7,0:6:2.99:0,3,23
chr10	21726724	.	TACACAC	T	796.38	PASS	AB=0.760;AC=21;AF=0.420;AN=50;BaseQRankSum=1.481;DP=503;FS=5.381;HRun=0;HaplotypeScore=137.4565;InbreedingCoeff=0.5608;MQ=64.31;MQ0=13;MQRankSum=-2.770;QD=3.42;ReadPosRankSum=1.930;VQSLOD=1.6171;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:26:2.18:28,2,0	0/0:4,0:4:3.01:0,3,95	./.	./.	0/1:12,0:20:0.01:0,0,0	1/1:13,4:19:9.86:92,10,0	0/1:24,3:31:24.80:57,0,25	0/0:20,0:20:17.98:0,18,371	0/1:10,0:15:8.81:59,0,9	1/1:18,2:20:12.04:206,12,0	./.	1/1:18,4:23:15.28:186,15,0	1/1:14,1:14:12:201,12,0	1/1:15,2:19:3.01:56,3,0	0/0:20,0:20:27.06:0,27,617	0/0:11,0:15:18.06:0,18,446	0/0:21,0:29:36.59:0,37,925	0/0:4,0:8:12.04:0,12,314	0/0:19,0:19:15.52:0,16,377	0/0:14,0:14:3.90:0,4,81	0/0:8,0:10:18.04:0,18,480	0/0:9,0:13:0.47:0,0,1	1/1:5,0:6:3.79:18,4,0	1/1:10,7:17:2.01:18,2,0	1/1:15,5:20:3.01:40,3,0	0/0:9,0:15:27.09:0,27,703	0/0:25,0:25:23.18:0,23,428	0/0:7,0:12:12.04:0,12,243
chr10	21726768	.	CCTACGAGAGA	C	449.82	PASS	AB=0.925;AC=6;AF=0.107;AN=56;BaseQRankSum=4.227;DP=494;FS=15.515;HRun=0;HaplotypeScore=142.6863;InbreedingCoeff=0.1466;MQ=42.75;MQ0=32;MQRankSum=-4.850;QD=4.73;ReadPosRankSum=-1.327;VQSLOD=1.7885;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:21:13.43:0,13,230	0/0:4,0:4:6:0,6,74	0/0:48,0:7:17.88:0,18,270	0/0:43,0:4:12.04:0,12,180	0/0:12,0:12:5.91:0,6,99	1/1:23,0:24:14.34:173,14,0	0/0:23,0:22:15.13:0,15,142	0/0:15,0:15:21.12:0,21,708	0/1:20,0:20:27.87:28,0,257	0/1:13,2:15:99:113,0,258	0/0:10,0:10:6.02:0,6,103	0/0:19,0:20:19.06:0,19,195	0/1:14,4:17:99:109,0,209	0/1:18,0:18:99:154,0,242	0/0:13,0:12:24.98:0,25,488	0/0:15,1:16:32.93:0,33,595	0/0:19,0:18:33.95:0,34,642	0/0:8,0:7:21.07:0,21,512	0/0:13,0:14:34.68:0,35,557	0/0:10,0:10:15.08:0,15,200	0/0:22,0:21:39.50:0,40,687	0/0:12,0:12:12.98:0,13,511	0/0:9,0:11:13.22:0,13,202	0/0:22,0:22:18.46:0,18,240	0/0:12,0:11:6.02:0,6,100	0/0:11,0:12:4.82:0,5,514	0/0:22,0:22:46.05:0,46,747	0/0:7,0:8:9.90:0,10,166
chr10	21726772	.	CGAGAGA	C	368.54	PASS	AB=0.893;AC=13;AF=0.295;AN=44;BaseQRankSum=1.997;DP=499;FS=41.281;HRun=0;HaplotypeScore=121.2852;InbreedingCoeff=0.4114;MQ=41.94;MQ0=33;MQRankSum=-4.205;QD=2.73;ReadPosRankSum=-0.955;VQSLOD=0.6543;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:20:2.80:0,3,42	0/1:4,0:4:0:0,0,0	./.	./.	./.	1/1:18,3:23:15.52:224,16,0	0/0:20,2:21:0.56:0,1,2	./.	0/0:18,2:20:0:0,0,0	1/1:14,0:15:6.01:104,6,0	./.	1/1:17,3:20:0.26:0,0,0	1/1:18,1:17:2.91:58,3,0	0/1:13,5:19:48.76:93,0,49	0/0:12,0:11:3.48:0,3,70	0/0:15,0:15:6.02:0,6,133	0/0:14,0:13:3.48:0,3,71	0/0:8,0:8:8.39:0,8,139	0/0:17,0:17:12.04:0,12,185	0/0:9,0:9:3.01:0,3,42	0/0:28,0:27:15.93:0,16,238	0/0:9,0:9:12.04:0,12,328	1/1:12,0:12:0.47:1,0,0	0/1:21,2:23:0:0,0,0	./.	0/0:14,0:14:12.04:0,12,371	0/0:21,0:22:15.82:0,16,243	0/0:8,0:7:3.48:0,3,44
chr10	21728032	.	CTT	C	9159.08	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=0.623;DP=669;FS=3.631;HRun=11;HaplotypeScore=94.1111;InbreedingCoeff=0.9875;MQ=74.02;MQ0=6;MQRankSum=-1.299;QD=25.73;ReadPosRankSum=3.325;VQSLOD=5.1041;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:81.25:0,81,1195	0/0:2,0:13:29.75:0,30,311	0/0:27,1:23:7.21:0,7,449	0/0:19,0:16:32.79:0,33,468	1/1:5,31:36:90.16:944,90,0	1/1:4,26:29:66.15:702,66,0	1/1:1,24:25:69.17:734,69,0	1/1:7,31:38:90.18:958,90,0	1/1:2,16:18:45.11:479,45,0	1/1:5,21:27:65.85:682,66,0	1/1:2,21:23:57.12:604,57,0	1/1:2,13:15:33.08:351,33,0	1/1:3,19:21:54.11:575,54,0	1/1:0,18:17:39.10:415,39,0	0/0:29,0:30:80.74:0,81,1168	0/0:3,0:15:36.06:0,36,360	0/0:4,0:18:36.06:0,36,355	0/0:4,0:13:27.05:0,27,286	0/0:5,0:18:42.08:0,42,433	0/0:5,0:35:93.07:0,93,883	0/0:3,0:10:21.03:0,21,199	1/1:4,19:23:54.09:575,54,0	1/1:3,23:25:63.14:671,63,0	1/1:1,16:17:48.11:511,48,0	1/1:4,34:37:90.20:958,90,0	0/0:39,0:38:93.28:0,93,1351	0/0:36,0:36:99:0,102,1538	0/0:8,0:9:26.58:0,27,378
chr10	21728855	.	C	CA	2642.59	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=10.676;DP=608;FS=7.316;HRun=11;HaplotypeScore=84.6128;InbreedingCoeff=0.9721;MQ=71.61;MQ0=0;MQRankSum=-0.954;QD=11.49;ReadPosRankSum=2.450;VQSLOD=3.2085;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:24:49.50:223,49,0	1/1:12,0:12:21.96:98,22,0	0/0:14,0:15:13.51:0,14,100	0/0:9,0:10:15.27:0,15,112	1/1:9,27:37:43.44:760,43,0	0/0:18,1:20:25.39:0,25,370	0/0:15,0:15:35.83:0,36,278	0/0:34,1:35:35.18:0,35,453	0/0:21,0:23:48.22:0,48,407	0/0:21,0:22:49.82:0,50,377	0/0:18,0:20:40.12:0,40,305	0/0:25,0:25:56.68:0,57,433	0/0:24,0:24:53.71:0,54,415	0/0:26,0:26:31.36:0,31,389	0/0:32,0:33:76.70:0,77,586	1/1:18,0:18:41.17:184,41,0	1/1:34,0:34:74.10:331,74,0	1/1:24,0:24:52.15:233,52,0	1/1:24,0:24:38.42:172,38,0	1/1:22,0:22:60.48:271,60,0	1/1:11,0:11:24.80:112,25,0	1/1:4,19:24:30.70:478,31,0	0/0:13,0:15:34.58:0,35,258	0/0:10,0:10:23.86:0,24,179	0/0:23,2:25:4.83:0,5,403	0/0:24,1:27:18.42:0,18,306	0/0:25,0:25:55.76:0,56,424	0/0:7,0:7:20.92:0,21,163
chr10	21728860	.	A	AAAT	8942.43	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-14.921;DP=621;FS=5.924;HRun=0;HaplotypeScore=88.7383;InbreedingCoeff=0.9673;MQ=68.63;MQ0=0;MQRankSum=-1.525;QD=49.13;ReadPosRankSum=5.221;VQSLOD=7.2107;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,28:28:57.10:1119,57,0	1/1:0,9:9:24.08:495,24,0	0/0:13,0:13:29.51:0,30,342	0/0:8,0:8:5.48:0,5,286	0/0:37,0:37:90.50:0,91,572	0/0:21,0:21:63.02:0,63,927	0/0:16,0:16:48.13:0,48,694	0/0:34,0:34:90:0,90,1248	0/0:22,1:23:7.57:0,8,924	0/0:22,0:22:60.15:0,60,887	0/0:19,0:19:56.92:0,57,771	0/0:26,0:26:75.16:0,75,1071	0/0:25,0:25:72.18:0,72,1032	0/0:24,0:24:70:0,70,1003	0/0:31,0:31:90.23:0,90,1350	1/1:1,17:18:45.15:931,45,0	1/1:1,33:35:84.29:1733,84,0	1/1:2,23:25:60.21:1237,60,0	1/1:4,26:30:84.19:1478,84,0	1/1:1,23:24:72.18:1404,72,0	1/1:1,12:13:27.08:545,27,0	0/0:24,0:24:59.26:0,59,359	0/0:14,0:14:39.59:0,40,592	0/0:9,0:9:27.08:0,27,411	0/0:27,0:27:80.78:0,81,1122	0/0:26,0:26:69.01:0,69,920	0/0:29,0:28:78.15:0,78,1086	0/0:11,0:11:33.07:0,33,447
chr10	21729504	.	T	TTTA	36369.82	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-7.835;DP=749;FS=1.871;HRun=0;HaplotypeScore=91.8007;InbreedingCoeff=0.9775;MQ=66.50;MQ0=1;MQRankSum=-5.994;QD=52.18;ReadPosRankSum=0.692;VQSLOD=6.5227;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,28:33:72.25:1548,72,0	1/1:1,7:8:21.07:464,21,0	0/0:12,0:12:32.98:0,33,442	0/0:10,0:10:27.09:0,27,420	1/1:4,35:39:99:2072,99,0	1/1:4,24:28:63.22:1389,63,0	1/1:5,19:25:57.20:1256,57,0	1/1:3,34:38:99:2066,99,0	1/1:4,11:16:30.10:657,30,0	1/1:4,36:40:99:2370,114,0	1/1:3,18:24:54.18:1099,54,0	1/1:2,20:23:60.21:1312,60,0	1/1:6,38:46:99:2479,114,0	1/1:2,23:26:63.21:1324,63,0	0/0:30,0:30:81.27:0,81,1277	1/1:6,26:32:72.24:1534,72,0	1/1:3,26:29:78.27:1691,78,0	1/1:2,21:23:60.21:1325,60,0	1/1:5,26:33:87.27:1787,87,0	1/1:5,31:36:96.32:1901,96,0	1/1:1,17:19:42.14:862,42,0	1/1:3,19:22:54.18:1160,54,0	1/1:5,17:23:42.14:895,42,0	1/1:4,14:19:39.13:860,39,0	1/1:2,28:31:78.27:1708,78,0	1/1:4,26:30:81.28:1768,81,0	1/1:2,48:49:99:2645,120,0	1/1:0,3:3:9.03:198,9,0
chr10	21729611	.	A	AT	4973.43	PASS	AB=0.561;AC=15;AF=0.268;AN=56;BaseQRankSum=-11.843;DP=677;FS=10.312;HRun=10;HaplotypeScore=71.6083;InbreedingCoeff=0.9000;MQ=70.48;MQ0=0;MQRankSum=-0.774;QD=24.26;ReadPosRankSum=0.784;VQSLOD=5.0844;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,29:35:87.01:897,87,0	1/1:0,7:7:18.05:192,18,0	0/0:22,0:22:28.29:0,28,288	0/0:6,0:6:8.99:0,9,74	0/0:10,0:41:54.96:0,55,159	0/0:28,0:28:80.91:0,81,665	0/0:17,0:17:41.94:0,42,345	0/0:41,0:41:98.86:0,99,813	0/0:8,0:8:17.96:0,18,145	0/0:31,0:31:48.88:0,49,607	0/0:16,0:16:38.94:0,39,320	0/0:22,0:22:53.92:0,54,443	0/0:21,0:21:50.89:0,51,415	0/0:22,0:22:53.93:0,54,443	0/0:21,0:21:59.93:0,60,493	1/1:1,22:24:57.14:608,57,0	1/1:5,13:18:36.09:384,36,0	1/1:0,26:26:66.17:704,66,0	1/1:5,25:30:72.12:746,72,0	1/1:9,33:42:90.23:959,90,0	0/1:5,18:23:13.73:484,0,14	0/0:1,0:18:30.55:0,31,88	0/0:25,0:25:67.17:0,67,563	0/0:15,0:15:41.95:0,42,345	0/0:33,0:33:89.86:0,90,732	0/0:30,0:30:68.86:0,69,564	0/0:31,0:31:77.90:0,78,640	0/0:24,0:24:65.90:0,66,538
chr10	21730952	.	C	CCTCGT	3442.36	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.557;DP=691;FS=0.618;HRun=0;HaplotypeScore=151.2012;InbreedingCoeff=0.9707;MQ=86.37;MQ0=0;MQRankSum=-10.081;QD=57.37;ReadPosRankSum=0.478;VQSLOD=3.7134;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,108,2197	0/0:13,0:13:33.11:0,33,704	0/0:24,0:24:72.25:0,72,1462	0/0:23,0:23:66.20:0,66,1325	1/1:6,25:31:47.87:1493,48,0	0/0:19,0:19:57.20:0,57,1215	0/0:25,0:25:69.24:0,69,1456	0/0:31,0:31:90.30:0,90,1852	0/0:27,0:27:75.24:0,75,1510	0/0:26,0:26:69.23:0,69,1435	0/0:18,0:18:54.19:0,54,1129	0/0:40,0:40:99:0,120,2557	0/0:26,0:26:75.26:0,75,1593	0/0:27,0:27:81.26:0,81,1670	0/0:30,0:30:87.28:0,87,1738	0/0:25,0:25:72.22:0,72,1429	0/0:33,0:33:93.32:0,93,1962	0/0:26,0:26:78.16:0,78,1475	0/0:20,0:20:60.14:0,60,1080	0/0:19,0:19:54.19:0,54,1151	0/0:25,0:25:72.23:0,72,1475	1/1:8,18:29:66.23:1949,66,0	0/0:21,0:21:60.21:0,60,1265	0/0:25,0:25:75.26:0,75,1558	0/0:13,0:13:39.13:0,39,831	0/0:29,0:29:81.28:0,81,1715	0/0:24,0:24:69.24:0,69,1434	0/0:3,0:3:9.03:0,9,192
chr10	21731413	.	GT	G	9003.05	PASS	AB=0.571;AC=47;AF=0.839;AN=56;BaseQRankSum=6.579;DP=578;FS=2.394;HRun=10;HaplotypeScore=71.6178;InbreedingCoeff=0.7925;MQ=69.03;MQ0=1;MQRankSum=-1.607;QD=17.76;ReadPosRankSum=1.443;VQSLOD=5.5992;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:57.15:0,57,630	1/1:2,0:11:14.26:42,14,0	0/0:16,0:16:13.44:0,13,266	0/0:7,0:8:2.18:0,2,61	1/1:0,26:26:71.97:625,72,0	1/1:2,14:16:41.99:365,42,0	1/1:1,17:18:50.99:443,51,0	1/1:5,27:32:77.95:673,78,0	1/1:2,11:14:35.02:292,35,0	1/1:2,26:28:77.97:673,78,0	1/1:3,21:23:35.71:530,36,0	1/1:0,22:22:62.99:547,63,0	0/1:5,14:20:25.33:251,0,25	1/1:3,31:34:86.98:755,87,0	0/0:25,2:27:23.08:0,23,702	1/1:5,0:21:30.55:90,31,0	1/1:1,0:13:16.30:48,16,0	1/1:0,0:13:24.44:71,24,0	1/1:5,1:26:42.17:141,42,0	1/1:2,0:24:42.77:126,43,0	1/1:2,0:17:30.55:90,31,0	1/1:2,23:25:32.84:514,33,0	1/1:1,16:17:47.98:417,48,0	1/1:2,10:12:26.99:234,27,0	1/1:1,18:19:50.99:443,51,0	1/1:5,23:28:68.94:592,69,0	1/1:4,37:41:99:911,105,0	1/1:0,5:5:15:130,15,0
chr10	21731627	.	T	TTTTCTTTCTTTCTTTC	22842.97	PASS	AB=1.000;AC=37;AF=0.685;AN=54;BaseQRankSum=-7.618;DP=561;FS=0.572;HRun=0;HaplotypeScore=209.9053;InbreedingCoeff=0.8573;MQ=58.73;MQ0=1;MQRankSum=-3.343;QD=54.26;ReadPosRankSum=-4.007;VQSLOD=3.6075;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:13:6.01:415,6,0	0/0:7,0:7:6.02:0,6,223	./.	0/1:8,0:5:0:0,0,0	1/1:18,0:36:41.97:800,42,0	1/1:6,11:17:24.08:1802,24,0	1/1:17,0:17:18.04:742,18,0	1/1:37,0:35:30.09:992,30,0	1/1:18,0:18:41.60:1118,42,0	1/1:21,14:37:58.97:3084,59,0	1/1:12,12:26:33.11:1905,33,0	1/1:12,4:16:21.07:1524,21,0	1/1:17,12:30:27.09:1735,27,0	1/1:5,14:23:27.09:2006,27,0	0/0:26,0:26:42.13:0,42,1572	0/0:13,0:13:21.07:0,21,726	0/0:7,0:7:12.04:0,12,477	0/0:16,0:16:12.04:0,12,496	0/0:20,0:20:30:0,30,929	0/0:30,0:30:40.33:0,40,1081	0/0:8,0:8:3.01:0,3,30	1/1:11,0:15:12.04:474,12,0	1/1:10,15:25:27.56:1877,28,0	1/1:20,0:20:17.99:993,18,0	1/1:9,8:17:21.07:1554,21,0	1/1:16,0:16:20.81:385,21,0	1/1:39,0:37:25.70:1291,26,0	1/1:11,0:10:3.01:145,3,0
chr10	21731644	.	TTTCTTTCTTTCTTTC	T	407.08	PASS	AB=1.000;AC=6;AF=0.107;AN=56;BaseQRankSum=0.982;DP=554;FS=16.142;HRun=0;HaplotypeScore=224.4430;InbreedingCoeff=0.2088;MQ=51.89;MQ0=6;MQRankSum=1.547;QD=4.73;ReadPosRankSum=-3.552;VQSLOD=0.7858;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:11.93:0,12,573	0/1:7,0:7:22.53:23,0,177	0/0:14,0:3:6.01:0,6,136	0/0:19,0:7:14.32:0,14,186	0/0:32,0:32:81.27:0,81,4580	0/0:16,0:16:30.09:0,30,1813	0/0:13,0:13:36.11:0,36,1962	0/0:32,0:30:52.54:0,53,3861	0/0:17,0:17:51.14:0,51,3235	0/0:33,0:33:89.45:0,89,5457	0/0:23,0:23:51.17:0,51,2861	0/0:17,0:17:45.14:0,45,2276	0/0:25,0:25:42.14:0,42,2635	0/0:28,0:28:48.62:0,49,2336	0/0:25,0:25:75.23:0,75,4639	0/0:15,0:15:24.07:0,24,348	0/0:8,0:8:9.03:0,9,138	1/1:0,16:16:9.03:405,9,0	0/1:26,0:26:78.36:78,0,997	0/1:29,0:29:2.81:3,0,1060	0/1:8,0:8:16.46:16,0,399	0/0:14,0:14:34.67:0,35,1857	0/0:25,0:25:48.63:0,49,2499	0/0:18,0:18:29.30:0,29,877	0/0:21,0:21:48.16:0,48,2708	0/0:15,0:15:36.12:0,36,2085	0/0:40,0:38:56.94:0,57,2726	0/0:4,0:3:9.03:0,9,450
chr10	21731652	.	TTTCTTTC	T	4268.04	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=1.489;DP=496;FS=0.457;HRun=0;HaplotypeScore=143.8136;InbreedingCoeff=0.7201;MQ=54.38;MQ0=6;MQRankSum=0.656;QD=25.25;ReadPosRankSum=-1.547;VQSLOD=3.8500;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:10.76:0,11,236	1/1:0,5:5:12:215,12,0	0/1:15,0:4:6.42:6,0,32	0/1:18,0:5:10.03:18,0,10	0/0:35,0:35:70.03:0,70,1991	0/0:10,0:10:30.09:0,30,890	0/0:13,0:13:39.09:0,39,908	0/1:31,0:29:99:314,0,1393	0/0:16,0:16:48.16:0,48,1668	0/0:23,0:23:69.21:0,69,2021	0/0:15,0:15:45.14:0,45,1315	0/0:13,0:13:36.11:0,36,990	0/0:17,0:17:45.13:0,45,1266	0/0:20,0:20:48.14:0,48,1180	0/0:24,0:24:72.22:0,72,2313	1/1:0,18:18:21.07:553,21,0	1/1:0,8:8:9.03:237,9,0	1/1:16,0:16:9.03:171,9,0	1/1:1,23:24:69.02:1159,69,0	1/1:0,26:26:69.08:1388,69,0	1/1:7,0:7:18.03:207,18,0	0/0:13,0:13:32.10:0,32,747	0/0:16,0:16:42.11:0,42,1114	0/0:19,0:19:24.93:0,25,367	0/0:17,0:17:48.14:0,48,1184	0/0:15,0:15:37.06:0,37,800	0/0:43,0:41:41.94:0,42,1004	0/0:4,0:3:6.02:0,6,151
chr10	21731659	.	C	CTTTCTTTCTTTCT	14098.42	PASS	AB=0.969;AC=26;AF=0.464;AN=56;BaseQRankSum=-1.527;DP=494;FS=1.848;HRun=0;HaplotypeScore=165.5745;InbreedingCoeff=-0.2369;MQ=54.87;MQ0=6;MQRankSum=-1.389;QD=36.81;ReadPosRankSum=-3.234;VQSLOD=3.8227;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,0:15:9.02:244,9,0	0/1:5,0:5:28.53:29,0,153	0/0:16,0:5:4.94:0,5,41	0/0:17,0:3:2.48:0,2,14	0/1:28,0:28:34.83:761,0,35	0/1:9,0:9:94.87:775,0,95	0/0:10,0:10:29.24:0,29,270	1/1:13,0:31:81.20:1619,81,0	0/1:18,0:18:99:1281,0,189	0/1:23,0:23:99:963,0,360	0/1:15,0:15:99:647,0,202	0/1:13,0:13:99:285,0,260	0/1:15,0:15:99:442,0,266	0/1:22,0:22:99:1042,0,281	0/0:24,0:24:66.18:0,66,1720	0/0:19,0:19:21:0,21,505	0/0:8,0:8:8.89:0,9,118	0/0:17,0:17:9.03:0,9,245	0/1:24,0:24:99:255,0,628	0/1:26,0:26:99:153,0,691	0/1:0,0:3:66.01:66,0,72	0/1:13,0:13:19.62:315,0,20	0/1:16,0:16:99:1074,0,226	0/1:16,0:16:68.32:68,0,133	0/1:18,0:18:99:601,0,310	1/1:0,9:19:48.16:1492,48,0	1/1:2,28:46:30.11:1789,30,0	1/1:2,1:3:3.01:196,3,0
chr10	21731662	.	T	TC	597.50	PASS	AB=0.942;AC=16;AF=0.286;AN=56;BaseQRankSum=8.262;DP=466;FS=2.485;HRun=0;HaplotypeScore=116.3183;InbreedingCoeff=0.3271;MQ=55.09;MQ0=5;MQRankSum=-2.220;QD=3.27;ReadPosRankSum=-2.501;VQSLOD=2.8824;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:9,0:9:5.69:29,6,0	0/1:4,0:4:8.80:9,0,26	0/0:16,0:5:8.89:0,9,61	0/0:16,0:3:3.01:0,3,33	0/0:26,0:26:0.42:0,0,380	0/0:12,0:12:14.42:0,14,214	0/0:10,0:10:30.10:0,30,412	1/1:31,0:29:14.56:241,15,0	0/1:18,0:18:99:159,0,281	0/0:24,0:24:35.66:0,36,624	0/0:16,0:16:42.22:0,42,456	0/0:13,0:13:28.91:0,29,437	0/0:17,0:17:26.70:0,27,434	0/0:22,0:22:22.96:0,23,455	0/0:22,0:22:66.21:0,66,894	0/0:21,0:21:26.49:0,26,170	0/0:9,0:9:8.77:0,9,50	0/0:17,0:17:14.81:0,15,97	0/1:25,0:25:14.86:15,0,178	0/1:26,0:26:26.24:26,0,162	1/1:3,0:3:8.79:52,9,0	0/0:10,0:10:16.86:0,17,218	0/0:16,0:16:32.51:0,33,451	0/1:7,8:15:10.77:11,0,206	0/0:16,0:16:16.26:0,16,475	1/1:13,0:13:9.53:121,10,0	0/1:37,0:36:17.49:90,0,17	1/1:2,0:2:2.74:12,3,0
chr10	21732414	.	CT	C	8646	PASS	AB=0.757;AC=41;AF=0.732;AN=56;BaseQRankSum=-0.342;DP=619;FS=3.026;HRun=11;HaplotypeScore=73.3969;InbreedingCoeff=0.6811;MQ=67.15;MQ0=1;MQRankSum=-0.491;QD=17.54;ReadPosRankSum=1.929;VQSLOD=5.9621;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,27:31:71.90:591,72,0	1/1:3,8:11:23.97:197,24,0	0/1:14,4:15:70.80:71,0,146	0/1:19,2:17:26.75:27,0,140	0/0:8,0:27:28.65:0,29,217	1/1:2,15:17:40.54:342,41,0	1/1:4,21:26:55.97:449,56,0	1/1:7,18:26:49.94:396,50,0	1/1:4,14:18:17.84:296,18,0	1/1:5,12:17:35.94:296,36,0	1/1:4,30:34:77.87:640,78,0	1/1:1,20:21:53.94:443,54,0	1/1:4,14:18:14.99:319,15,0	1/1:5,20:25:27.93:436,28,0	0/0:23,2:25:32.47:0,32,536	1/1:1,20:21:53.92:444,54,0	1/1:2,28:30:80.85:665,81,0	0/1:3,17:20:4.71:362,0,5	1/1:12,23:35:65.86:541,66,0	1/1:2,23:25:70.92:568,71,0	1/1:4,5:9:11.98:98,12,0	0/0:4,0:17:31.57:0,32,174	1/1:3,24:27:65.82:542,66,0	1/1:0,10:10:26.97:222,27,0	1/1:2,29:33:87.98:702,88,0	0/0:22,2:25:1.66:0,2,406	0/0:26,0:25:60.09:0,60,613	0/0:5,0:6:8.19:0,8,122
chr10	21732896	.	CG	C	5009.41	PASS	AB=0.871;AC=40;AF=0.714;AN=56;BaseQRankSum=-2.498;DP=428;FS=6.124;HRun=10;HaplotypeScore=60.2631;InbreedingCoeff=0.6105;MQ=85.73;MQ0=0;MQRankSum=-1.926;QD=13.95;ReadPosRankSum=2.338;VQSLOD=4.8701;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:3,0:3:2.84:0,3,14	1/1:1,4:5:5.99:52,6,0	0/1:20,1:18:21.20:21,0,69	0/1:20,0:17:19.64:20,0,146	0/0:15,0:15:17.02:0,17,95	1/1:0,21:21:48.46:417,48,0	0/1:4,7:11:2.52:135,0,3	1/1:6,0:17:22.46:89,22,0	1/1:2,16:18:44.99:391,45,0	1/1:7,15:24:49.02:398,49,0	1/1:6,7:13:17.99:156,18,0	1/1:2,6:8:17.99:156,18,0	1/1:2,12:14:35.99:311,36,0	1/1:4,8:12:20.99:182,21,0	0/1:20,2:22:7:7,0,355	1/1:2,17:19:35.99:312,36,0	1/1:3,21:24:44.99:389,45,0	1/1:2,11:13:26.50:233,26,0	1/1:0,7:7:21:182,21,0	1/1:4,14:18:35.98:312,36,0	1/1:4,15:19:35.99:312,36,0	0/0:14,0:14:17.25:0,17,86	1/1:5,11:16:32.58:285,33,0	1/1:2,13:16:35.03:292,35,0	1/1:4,17:21:43.60:356,44,0	0/0:12,0:12:18.05:0,18,198	0/0:19,1:20:13.06:0,13,327	0/0:5,0:5:6:0,6,58
chr10	21732901	.	G	GGGC	880.27	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-4.764;DP=417;FS=0.000;HRun=0;HaplotypeScore=90.2451;InbreedingCoeff=0.8751;MQ=82.36;MQ0=0;MQRankSum=2.160;QD=25.89;ReadPosRankSum=0.233;VQSLOD=3.6113;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:2,0:2:2.74:0,3,12	0/0:5,0:5:9:0,9,81	0/0:19,0:16:20.07:0,20,211	0/0:19,0:16:30.07:0,30,332	1/1:1,17:18:33.02:560,33,0	0/0:23,0:23:48.01:0,48,454	0/0:15,0:15:39.01:0,39,348	0/0:15,0:15:31.19:0,31,257	0/0:16,0:16:45.05:0,45,427	0/0:24,0:24:56.20:0,56,476	0/0:7,0:7:18.02:0,18,170	0/0:8,0:8:21.02:0,21,196	0/0:17,0:17:39.04:0,39,366	0/0:15,0:15:41.93:0,42,362	0/0:19,0:19:45.09:0,45,600	0/0:17,0:17:36.04:0,36,341	0/0:22,0:22:47.79:0,48,436	0/0:13,0:13:28.59:0,29,260	0/0:9,0:9:27.02:0,27,249	0/0:16,0:16:45:0,45,411	0/0:16,0:16:36.04:0,36,341	1/1:0,15:16:21.07:440,21,0	0/0:16,0:16:44.87:0,45,406	0/0:15,0:15:39.04:0,39,366	0/0:21,0:21:46.29:0,46,433	0/0:11,0:11:30.03:0,30,391	0/0:18,0:18:50.93:0,51,574	0/0:5,0:5:15:0,15,149
chr10	21732942	.	G	GCAGA	140.03	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=0.434;DP=480;FS=0.000;HRun=0;HaplotypeScore=92.3454;InbreedingCoeff=0.5636;MQ=75.01;MQ0=0;MQRankSum=0.181;QD=4.00;ReadPosRankSum=-1.464;VQSLOD=1.4979;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:2,5:6:9.03:223,9,0	0/0:2,0:2:3.01:0,3,50	0/0:23,0:20:36.12:0,36,576	0/1:28,0:26:0.21:0,0,571	0/0:17,0:17:33.11:0,33,554	0/0:27,0:27:54.18:0,54,906	0/0:20,0:20:51.17:0,51,853	0/0:24,0:25:57.19:0,57,933	0/0:19,0:19:51.12:0,51,801	0/0:19,0:19:42.14:0,42,682	0/0:15,0:15:39.12:0,39,620	0/0:13,0:13:33.11:0,33,554	0/0:30,0:30:69.21:0,69,1108	0/0:23,0:23:66.21:0,66,1083	0/0:16,0:16:36.12:0,36,605	0/0:17,0:17:36.12:0,36,597	0/0:15,0:15:30.10:0,30,492	0/0:9,0:9:15.05:0,15,252	0/0:21,0:21:45.15:0,45,744	0/0:6,0:6:12.04:0,12,202	0/0:20,0:20:42.14:0,42,705	0/0:16,0:16:36.12:0,36,605	0/0:16,0:16:36.12:0,36,595	0/0:19,0:19:48.16:0,48,798	0/0:14,0:14:36.09:0,36,575	0/0:24,0:24:60.20:0,60,979	0/0:16,0:16:45.15:0,45,756	0/0:3,0:3:6.02:0,6,101
chr10	21733345	.	GTCTT	G	1787.20	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.739;DP=526;FS=10.752;HRun=0;HaplotypeScore=87.3685;InbreedingCoeff=0.9942;MQ=72.67;MQ0=0;MQRankSum=-1.830;QD=39.72;ReadPosRankSum=1.087;VQSLOD=3.3350;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:19:57.20:0,57,1435	0/0:6,0:6:18.06:0,18,468	0/0:19,0:18:24.52:0,25,783	0/0:29,0:26:63.22:0,63,1501	1/1:2,20:22:48.16:872,48,0	0/0:13,0:13:33.11:0,33,864	0/0:16,0:15:39.13:0,39,954	0/0:13,0:13:36.12:0,36,931	0/0:15,0:15:39.13:0,39,958	0/0:25,0:25:66.22:0,66,1657	0/0:29,0:29:84.29:0,84,2143	0/0:20,0:20:60.21:0,60,1533	0/0:18,0:18:54.19:0,54,1379	0/0:16,0:16:48.16:0,48,1257	0/0:20,0:20:60.21:0,60,1503	0/0:16,0:16:48.16:0,48,1186	0/0:18,0:18:51.16:0,51,1269	0/0:12,0:12:36.10:0,36,807	0/0:10,0:10:30.10:0,30,761	0/0:32,0:32:90.31:0,90,2328	0/0:19,0:19:51.18:0,51,1284	1/1:1,22:23:60.20:1037,60,0	0/0:16,0:16:45.15:0,45,1178	0/0:27,0:27:69.21:0,69,1569	0/0:16,0:16:45.15:0,45,1149	0/0:22,0:22:63.22:0,63,1628	0/0:19,0:19:54.18:0,54,1369	0/0:14,0:14:36.12:0,36,943
chr10	21733414	.	G	GCT	3703.99	PASS	AB=0.875;AC=40;AF=0.714;AN=56;BaseQRankSum=5.121;DP=634;FS=11.119;HRun=0;HaplotypeScore=150.2071;InbreedingCoeff=0.3449;MQ=58.36;MQ0=14;MQRankSum=-0.626;QD=7.83;ReadPosRankSum=-0.870;VQSLOD=2.3469;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:31,0:27:2.48:171,2,0	0/1:9,0:9:29.05:75,0,29	0/0:30,0:13:2.98:0,3,22	0/0:57,0:35:10.90:0,11,92	0/0:18,0:18:20.35:0,20,136	1/1:17,1:17:24:224,24,0	1/1:19,0:18:11.95:96,12,0	1/1:40,0:40:24.16:167,24,0	1/1:14,0:15:27.43:272,27,0	1/1:20,1:21:28.28:232,28,0	1/1:14,0:14:11.99:100,12,0	1/1:16,0:28:3:26,3,0	1/1:11,1:25:17.97:196,18,0	1/1:25,0:26:38.59:334,39,0	0/0:24,0:28:38.97:0,39,362	0/1:13,12:25:73.84:74,0,89	0/1:7,12:19:30.61:93,0,31	0/1:15,0:15:12.87:144,0,13	0/1:15,0:14:8.22:110,0,8	1/1:17,0:17:8.28:249,8,0	0/1:29,1:28:19.70:172,0,20	0/0:26,0:26:6.08:0,6,29	1/1:13,1:14:20.99:185,21,0	1/1:37,0:37:26.44:232,26,0	1/1:10,1:12:14.94:138,15,0	1/1:14,1:14:14.85:108,15,0	1/1:18,1:17:23.97:235,24,0	1/1:6,0:5:8.97:70,9,0
chr10	21733444	.	TCA	T	950.47	PASS	AB=0.947;AC=25;AF=0.481;AN=52;BaseQRankSum=2.781;DP=574;FS=31.454;HRun=0;HaplotypeScore=147.1941;InbreedingCoeff=-0.0373;MQ=50.11;MQ0=20;MQRankSum=2.000;QD=2.71;ReadPosRankSum=-4.834;VQSLOD=-0.5438;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:32:24.40:0,24,204	0/1:12,0:12:14.05:14,0,109	./.	./.	0/1:18,0:16:0.38:123,0,0	0/1:19,2:18:12.26:75,0,12	1/1:24,3:26:32.33:204,32,0	0/0:30,0:30:29.52:0,30,196	0/1:15,1:17:27.38:51,0,27	0/1:17,1:17:24.83:25,0,61	1/1:12,1:12:8.72:48,9,0	1/1:20,0:20:3.88:51,4,0	0/1:21,1:22:17.25:57,0,17	0/1:27,1:30:10.15:106,0,10	0/0:31,0:29:13.66:0,14,441	0/0:28,0:26:9.57:0,10,261	0/0:26,0:25:8.11:0,8,239	0/0:12,0:12:1.07:0,1,78	0/1:9,0:9:2.02:2,0,22	0/1:16,0:15:13.35:13,0,75	0/0:34,0:30:47.75:0,48,440	1/1:24,0:23:5.96:50,6,0	1/1:16,2:17:0.51:78,1,0	0/1:38,2:40:6.07:102,0,6	0/1:9,1:10:2.71:30,0,3	0/1:8,0:9:8.83:21,0,9	1/1:16,0:15:0.14:26,0,0	0/1:8,0:6:13.92:26,0,14
chr10	21734381	.	A	AT	971.65	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-6.088;DP=644;FS=6.039;HRun=4;HaplotypeScore=64.7042;InbreedingCoeff=0.9748;MQ=87.08;MQ0=0;MQRankSum=-3.465;QD=34.70;ReadPosRankSum=1.336;VQSLOD=4.3259;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,27:28:78.26:1067,78,0	0/0:15,0:15:45.13:0,45,510	0/0:36,0:35:68.49:0,68,733	0/0:16,0:16:28.19:0,28,312	0/0:32,0:32:96.27:0,96,1089	0/0:29,0:29:81.20:0,81,899	0/0:14,0:14:39.07:0,39,421	0/0:22,0:22:63.15:0,63,695	0/0:20,0:20:51.13:0,51,567	0/0:36,0:36:99:0,105,1184	0/0:36,0:36:99:0,105,1191	0/0:27,0:27:72.13:0,72,784	0/0:34,0:34:99:0,99,1111	0/0:29,0:29:84.19:0,84,924	0/0:23,0:23:63.18:0,63,714	0/0:14,0:14:42.12:0,42,476	0/0:15,0:15:42.12:0,42,476	0/0:11,0:11:30.08:0,30,340	0/0:14,0:14:36.07:0,36,390	0/0:23,0:23:60.10:0,60,664	0/0:6,0:6:18.05:0,18,204	0/0:31,0:31:84.22:0,84,943	0/0:22,0:22:60.17:0,60,680	0/0:10,0:10:30.09:0,30,340	0/0:29,0:29:81.22:0,81,910	0/0:38,0:38:99:0,102,1142	0/0:29,0:29:84.23:0,84,944	0/0:5,0:5:15.04:0,15,170
chr10	21735230	.	A	AT	1846.42	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-7.908;DP=677;FS=4.192;HRun=4;HaplotypeScore=61.2086;InbreedingCoeff=0.9974;MQ=75.46;MQ0=0;MQRankSum=-1.427;QD=34.84;ReadPosRankSum=0.334;VQSLOD=4.1419;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:66.18:0,66,739	0/0:13,0:13:39.11:0,39,441	0/0:16,0:16:30.22:0,30,377	0/0:9,0:9:20.99:0,21,205	1/1:2,31:32:93.22:1230,93,0	0/0:26,0:26:78.22:0,78,884	0/0:18,0:18:51.11:0,51,550	0/0:37,0:37:96.22:0,96,1045	0/0:13,0:13:36.09:0,36,399	0/0:37,0:37:99:0,111,1237	0/0:21,0:21:60.17:0,60,680	0/0:18,0:18:51.15:0,51,578	0/0:34,0:34:99:0,102,1156	0/0:31,0:31:87.25:0,87,987	0/0:27,0:27:78.22:0,78,884	0/0:32,0:32:93.26:0,93,1055	0/0:22,0:22:63.14:0,63,684	0/0:12,0:12:36.10:0,36,408	0/0:23,0:23:66.15:0,66,722	0/0:36,0:36:99:0,99,1122	0/0:16,0:16:48.14:0,48,544	1/1:1,19:20:54.18:739,54,0	0/0:26,0:26:75.20:0,75,840	0/0:12,0:12:36.10:0,36,408	0/0:29,0:29:87.24:0,87,978	0/0:39,0:39:99:0,114,1271	0/0:41,0:41:99:0,114,1292	0/0:13,0:13:39.11:0,39,442
chr10	21735888	.	T	TTCTC	6099.38	PASS	AC=52;AF=0.963;AN=54;BaseQRankSum=-1.621;DP=559;FS=0.000;HRun=0;HaplotypeScore=182.5050;InbreedingCoeff=0.2224;MQ=64.72;MQ0=12;MQRankSum=-1.732;QD=12.68;ReadPosRankSum=0.651;VQSLOD=4.2940;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:19:6.02:105,6,0	1/1:7,0:8:3.01:52,3,0	./.	0/0:49,0:19:2.49:0,2,31	1/1:28,0:27:12.04:195,12,0	1/1:21,0:23:15.05:239,15,0	1/1:27,0:25:18.50:250,18,0	1/1:23,0:22:12.51:266,13,0	1/1:17,0:16:6.02:102,6,0	1/1:17,0:19:33.10:548,33,0	1/1:25,0:28:12.04:215,12,0	1/1:12,0:12:3.01:52,3,0	1/1:15,0:17:26.93:353,27,0	1/1:11,0:12:8.96:164,9,0	1/1:16,0:16:6.39:101,6,0	1/1:11,1:22:33.06:523,33,0	1/1:10,0:11:8.91:156,9,0	1/1:5,0:8:9.03:158,9,0	1/1:16,0:18:24.05:355,24,0	1/1:14,0:17:18.01:276,18,0	1/1:6,0:6:3.01:66,3,0	1/1:18,0:17:15.05:249,15,0	1/1:19,0:20:6.02:104,6,0	1/1:18,0:18:6.02:136,6,0	1/1:28,0:27:8.91:115,9,0	1/1:12,8:25:38.72:637,39,0	1/1:10,8:24:29.97:527,30,0	1/1:5,3:10:8.90:157,9,0
chr10	21735922	.	C	CTCTCTCTCTCTCTCCA	5443.48	PASS	AB=0.932;AC=27;AF=0.482;AN=56;BaseQRankSum=-2.624;DP=497;FS=47.577;HRun=0;HaplotypeScore=201.7862;InbreedingCoeff=-0.5599;MQ=51.45;MQ0=26;MQRankSum=-2.924;QD=15.60;ReadPosRankSum=-0.169;VQSLOD=2.3161;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:13,0:13:83.24:83,0,136	1/1:4,0:4:2.69:84,3,0	0/0:41,0:9:21.05:0,21,241	0/0:54,0:12:17.58:0,18,143	0/1:18,0:18:56.29:233,0,56	0/1:16,0:17:55.52:479,0,56	0/1:21,0:20:99:243,0,308	0/1:18,0:18:99:254,0,425	0/1:6,0:7:62.27:238,0,62	0/1:15,0:14:99:492,0,250	0/0:24,0:22:21.86:0,22,258	0/1:9,0:9:79.89:178,0,80	0/1:17,0:17:99:426,0,223	0/1:10,0:10:45.50:154,0,46	0/1:8,10:24:27.37:445,0,27	0/1:20,0:20:99:603,0,179	0/1:8,0:7:99:137,0,160	0/1:6,0:6:57.20:236,0,57	0/1:11,0:11:81.17:246,0,81	0/1:28,0:29:4.42:310,0,4	0/1:3,0:6:34.45:59,0,34	1/1:14,0:13:1.83:90,2,0	0/1:14,0:14:99:178,0,117	1/1:18,0:18:4.65:132,5,0	0/1:18,0:17:88.32:89,0,88	0/1:16,0:16:22.02:22,0,440	0/0:29,0:29:57.11:0,57,885	0/1:9,0:9:29.78:30,0,222
chr10	21735953	.	CACACAT	C	2498.82	PASS	AB=0.991;AC=31;AF=0.554;AN=56;BaseQRankSum=6.568;DP=558;FS=1.178;HRun=0;HaplotypeScore=170.6469;InbreedingCoeff=-0.0264;MQ=46.17;MQ0=27;MQRankSum=-0.816;QD=6.65;ReadPosRankSum=1.516;VQSLOD=2.8525;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:24:5.58:6,0,81	1/1:4,0:4:2.99:23,3,0	0/0:66,0:10:23.81:0,24,275	0/0:72,0:21:25.21:0,25,649	1/1:19,0:19:3:25,3,0	0/1:21,0:21:35.62:135,0,36	0/1:18,0:15:2.99:227,0,3	0/1:22,0:21:45.53:274,0,46	0/1:7,0:7:23.22:43,0,23	1/1:10,1:10:19.19:268,19,0	1/1:20,2:22:22.61:305,23,0	1/1:12,0:12:12.04:209,12,0	0/1:15,1:16:3.83:310,0,4	1/1:15,0:15:8.58:88,9,0	0/1:24,0:22:29.83:30,0,40	0/1:19,0:19:30.02:54,0,30	0/1:7,0:7:20.23:20,0,23	0/1:6,0:5:0.75:1,0,36	0/1:26,0:22:68.08:68,0,119	0/1:29,0:29:25.74:112,0,26	0/0:9,0:9:2.83:0,3,21	0/1:15,0:15:0.29:0,0,0	1/1:15,1:16:25.49:355,25,0	1/1:5,10:15:1.55:4,2,0	0/1:12,1:13:0.58:78,0,1	0/1:15,0:14:24.78:25,0,521	0/0:28,0:28:34.67:0,35,1335	0/0:5,0:5:7.01:0,7,290
chr10	21735955	.	CACAT	C	2259.71	PASS	AB=0.963;AC=36;AF=0.643;AN=56;BaseQRankSum=8.023;DP=550;FS=3.398;HRun=0;HaplotypeScore=160.9701;InbreedingCoeff=-0.1127;MQ=46.69;MQ0=27;MQRankSum=0.006;QD=5.50;ReadPosRankSum=1.102;VQSLOD=2.7640;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:25:23.40:34,0,23	1/1:4,0:4:3:28,3,0	0/0:61,0:9:23.73:0,24,197	0/0:71,0:21:29.04:0,29,517	1/1:19,0:19:3:28,3,0	0/1:11,10:21:42.51:174,0,43	0/1:19,1:17:17.77:121,0,18	0/1:21,0:20:69.41:123,0,69	0/1:7,0:7:14.30:23,0,14	1/1:11,0:10:25.97:213,26,0	1/1:20,2:22:23.64:220,24,0	1/1:12,0:12:11.71:115,12,0	0/1:15,1:16:4.01:247,0,4	1/1:8,7:15:8.39:85,8,0	0/1:23,0:21:37.15:61,0,37	0/1:18,0:18:23.07:109,0,23	0/1:7,0:7:22.95:44,0,23	0/1:5,0:4:11.45:19,0,11	0/1:24,1:21:32.59:211,0,33	1/1:25,2:27:1.84:147,2,0	1/1:9,0:9:5.45:45,5,0	0/1:16,1:17:0.16:0,0,0	1/1:15,0:17:26.63:231,27,0	1/1:14,1:15:3:25,3,0	1/1:12,1:13:8.67:91,9,0	0/1:15,0:14:23:23,0,366	0/1:27,0:27:4.67:5,0,912	0/0:5,0:5:6.96:0,7,184
chr10	21735957	.	CAT	C	640.42	PASS	AB=0.978;AC=31;AF=0.554;AN=56;BaseQRankSum=2.848;DP=532;FS=16.514;HRun=0;HaplotypeScore=152.3214;InbreedingCoeff=-0.0388;MQ=47.50;MQ0=25;MQRankSum=0.430;QD=1.84;ReadPosRankSum=-2.570;VQSLOD=1.2233;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:25:16.81:46,0,17	1/1:4,0:4:1.55:4,2,0	0/0:56,0:9:7.65:0,8,122	0/0:66,0:20:30.91:0,31,375	1/1:17,2:19:0.89:3,1,0	0/1:20,0:20:41.65:44,0,42	0/1:17,2:17:28.63:99,0,29	0/1:20,0:19:24.72:25,0,123	0/1:7,0:7:11.59:12,0,17	0/1:9,1:9:0.40:78,0,0	1/1:22,0:22:5.71:55,6,0	1/1:10,2:12:5.79:53,6,0	0/1:15,1:16:33.53:89,0,34	1/1:15,0:15:5.06:38,5,0	0/1:22,0:20:4.96:5,0,66	0/0:18,0:18:12.16:0,12,62	0/1:7,0:7:22.56:23,0,23	0/1:5,0:4:0.33:0,0,14	0/1:23,0:20:13.67:14,0,54	0/0:25,2:27:8.93:0,9,39	0/0:9,0:9:1.83:0,2,4	1/1:15,0:15:0.47:1,0,0	1/1:17,0:17:5.02:100,5,0	1/1:15,0:15:3:25,3,0	1/1:14,0:14:10.42:61,10,0	0/1:14,0:13:6.78:7,0,229	0/1:26,1:27:15.12:15,0,529	0/0:5,0:5:7:0,7,133
chr10	21735959	.	TACACAC	T	4251.46	PASS	AB=1.000;AC=41;AF=0.732;AN=56;BaseQRankSum=3.188;DP=515;FS=0.000;HRun=0;HaplotypeScore=152.5116;InbreedingCoeff=0.4102;MQ=47.82;MQ0=25;MQRankSum=0.256;QD=12.43;ReadPosRankSum=1.056;VQSLOD=3.9233;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:25:9.55:0,10,101	1/1:4,0:4:3.01:32,3,0	0/0:52,0:9:12.04:0,12,165	0/0:64,0:19:29.79:0,30,521	1/1:18,0:18:2.94:37,3,0	1/1:20,2:22:13.83:162,14,0	1/1:18,0:17:28.34:507,28,0	1/1:4,13:16:35.43:568,35,0	1/1:2,1:7:5.38:76,5,0	1/1:9,0:9:23.27:363,23,0	1/1:18,2:21:23.91:396,24,0	1/1:13,0:12:12.04:207,12,0	1/1:12,1:15:31.74:432,32,0	1/1:11,2:15:5.44:66,5,0	1/1:21,0:19:9.22:87,9,0	1/1:16,0:16:18.01:191,18,0	1/1:8,0:8:3.41:20,3,0	0/1:5,0:4:13.32:25,0,13	0/1:22,0:19:82.19:241,0,82	1/1:26,0:26:2.91:252,3,0	0/1:9,0:9:31.91:39,0,32	0/1:15,0:15:0:0,0,1	1/1:15,0:17:19:409,19,0	1/1:15,0:15:2.74:12,3,0	1/1:5,8:14:5.53:90,6,0	0/1:13,0:12:38.23:38,0,478	0/0:26,0:26:54.03:0,54,1151	0/0:5,0:5:12.04:0,12,227
chr10	21735967	.	CACACACAG	C	3936.41	PASS	AB=0.984;AC=30;AF=0.556;AN=54;BaseQRankSum=2.082;DP=469;FS=14.398;HRun=0;HaplotypeScore=148.7771;InbreedingCoeff=-0.1361;MQ=47.07;MQ0=17;MQRankSum=-1.312;QD=12.38;ReadPosRankSum=3.515;VQSLOD=1.8251;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:23:12.51:0,13,197	1/1:4,0:4:3.01:46,3,0	0/0:37,0:6:12.04:0,12,165	0/0:49,0:14:29.62:0,30,524	1/1:17,0:17:2.95:51,3,0	0/1:19,1:20:99:127,0,113	0/1:20,0:18:86.74:380,0,87	1/1:16,0:15:35.43:568,35,0	0/1:7,0:7:11.66:17,0,12	0/1:10,0:10:99:281,0,102	0/1:17,1:18:28.10:335,0,28	1/1:6,7:12:12.04:325,12,0	0/1:17,0:17:52.27:224,0,52	0/1:14,0:15:40.48:51,0,40	1/1:21,0:19:11.78:166,12,0	1/1:12,0:12:18.02:247,18,0	1/1:6,0:6:0.21:5,0,0	0/1:6,0:5:12.12:39,0,12	0/1:22,0:21:99:291,0,112	1/1:27,0:27:4.63:358,5,0	0/1:9,0:9:39.31:39,0,58	./.	0/1:16,1:17:33.45:321,0,33	0/1:14,0:14:7.93:19,0,8	0/1:15,0:15:10.82:11,0,42	0/1:12,0:11:37.37:37,0,454	0/0:25,0:25:38.39:0,38,1185	0/0:5,0:5:12.04:0,12,258
chr10	21735969	.	CACACAGAGAGAGAGAG	C	3882.36	PASS	AB=0.949;AC=20;AF=0.370;AN=54;BaseQRankSum=-0.684;DP=439;FS=29.161;HRun=0;HaplotypeScore=174.3357;InbreedingCoeff=0.0464;MQ=47.96;MQ0=15;MQRankSum=0.248;QD=18.23;ReadPosRankSum=-0.783;VQSLOD=0.9827;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:23:12.04:0,12,561	1/1:0,4:4:2.84:140,3,0	0/0:29,0:3:8.96:0,9,76	0/0:44,0:13:25.29:0,25,330	1/1:16,0:17:1.51:4,2,0	0/1:20,0:20:10.26:10,0,941	0/1:20,0:18:99:202,0,1074	0/1:17,0:16:93.39:268,0,93	0/0:5,0:5:5.31:0,5,237	0/1:9,0:10:79.26:79,0,819	0/1:17,0:17:86.71:87,0,460	0/0:8,0:9:12.01:0,12,190	0/0:15,0:15:8.02:0,8,1222	0/0:13,0:13:9.01:0,9,295	0/0:16,0:17:10.95:0,11,127	1/1:7,4:12:18.06:648,18,0	0/1:6,0:6:44.81:95,0,45	1/1:3,1:4:3.86:163,4,0	0/1:7,16:23:99:923,0,145	1/1:5,21:27:27.09:1119,27,0	0/1:8,0:8:86.22:86,0,103	./.	0/1:14,0:14:51.28:51,0,815	0/0:13,0:13:5.55:0,6,260	0/0:14,0:14:12.03:0,12,534	0/1:12,0:11:8.29:8,0,1011	0/0:23,0:23:54.18:0,54,2046	0/0:5,0:5:12.04:0,12,464
chr10	21735971	.	CACAGAGAG	C	1935.51	PASS	AB=1.000;AC=27;AF=0.519;AN=52;BaseQRankSum=4.987;DP=424;FS=26.430;HRun=0;HaplotypeScore=141.6999;InbreedingCoeff=0.1461;MQ=48.67;MQ0=14;MQRankSum=-2.483;QD=7.68;ReadPosRankSum=0.963;VQSLOD=1.1123;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:22:12.04:0,12,239	1/1:4,0:4:3.01:53,3,0	./.	0/0:40,0:12:26.34:0,26,191	1/1:2,13:16:2.99:63,3,0	0/1:20,0:20:45.33:45,0,365	0/1:19,0:17:67.42:67,0,485	1/1:17,0:16:4.89:94,5,0	0/0:5,0:5:5.35:0,5,66	0/1:10,0:10:56.30:56,0,326	0/1:18,0:18:75.01:75,0,241	1/1:10,0:9:12.04:184,12,0	0/1:15,0:15:8.32:8,0,420	0/1:14,0:14:23.04:23,0,195	1/1:19,0:17:14.82:196,15,0	1/1:10,0:10:18.02:272,18,0	1/1:4,0:5:2.18:40,2,0	1/1:5,0:4:6.46:65,6,0	0/1:22,0:22:26.80:323,0,27	1/1:25,0:26:26.98:434,27,0	0/1:8,0:8:26.91:37,0,27	./.	0/1:14,0:14:71.38:71,0,248	0/0:13,0:13:5.71:0,6,84	0/0:14,0:14:11.87:0,12,198	0/0:12,0:11:14.28:0,14,344	0/0:22,0:22:30.51:0,31,796	0/0:5,0:5:11.95:0,12,124
chr10	21737793	.	AT	A	723.05	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.462;DP=627;FS=7.083;HRun=2;HaplotypeScore=58.5317;InbreedingCoeff=0.9759;MQ=79.44;MQ0=0;MQRankSum=-3.053;QD=28.92;ReadPosRankSum=1.172;VQSLOD=2.7546;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,25:25:63.20:818,63,0	0/0:8,0:8:24.08:0,24,355	0/0:21,0:21:57.19:0,57,827	0/0:7,1:8:13.73:0,14,250	0/0:28,0:28:84.28:0,84,1259	0/0:16,0:16:48.16:0,48,720	0/0:18,0:18:54.18:0,54,807	0/0:34,0:34:99:0,102,1507	0/0:17,0:17:51.17:0,51,759	0/0:29,0:29:87.29:0,87,1286	0/0:36,0:36:99:0,108,1596	0/0:20,0:20:57.19:0,57,854	0/0:34,0:34:99:0,102,1520	0/0:37,0:37:99:0,108,1599	0/0:24,0:24:72.24:0,72,1074	0/0:33,0:32:96.31:0,96,1415	0/0:25,0:25:69.23:0,69,1034	0/0:19,0:19:54.18:0,54,809	0/0:11,0:11:33.11:0,33,494	0/0:38,0:38:99:0,114,1708	0/0:14,0:14:39.13:0,39,585	0/0:15,0:15:45.15:0,45,675	0/0:24,0:24:72.24:0,72,1068	0/0:11,0:10:33.11:0,33,495	0/0:22,0:22:66.22:0,66,984	0/0:20,0:20:57.19:0,57,855	0/0:31,0:31:90.30:0,90,1338	0/0:9,0:9:27.09:0,27,404
chr10	21738542	.	GA	G	18145.94	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=1.594;DP=684;FS=14.414;HRun=6;HaplotypeScore=68.0081;InbreedingCoeff=0.9957;MQ=87.23;MQ0=0;MQRankSum=-9.912;QD=28.44;ReadPosRankSum=7.022;VQSLOD=3.5120;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,38:39:99:1050,99,0	1/1:0,8:8:21.05:225,21,0	0/0:25,0:26:60.18:0,60,747	0/0:20,0:19:39.33:0,39,460	1/1:1,25:26:72.18:773,72,0	1/1:0,22:22:66.17:709,66,0	1/1:3,20:23:48.12:516,48,0	1/1:2,27:29:81.20:869,81,0	1/1:2,17:19:48.12:516,48,0	1/1:1,26:27:74.92:764,75,0	1/1:1,20:21:57.14:612,57,0	1/1:2,19:21:51.13:548,51,0	1/1:2,35:37:96.12:1031,96,0	1/1:2,26:28:72.18:773,72,0	1/1:3,29:32:81.20:870,81,0	1/1:2,24:26:57.14:612,57,0	1/1:3,23:26:63.16:677,63,0	1/1:1,20:21:57.14:612,57,0	1/1:0,14:14:42.11:451,42,0	1/1:3,27:30:81.16:852,81,0	1/1:0,13:13:36.09:387,36,0	1/1:2,21:23:54.13:580,54,0	1/1:0,18:18:54.14:580,54,0	1/1:1,16:17:48.12:516,48,0	1/1:0,27:27:81.20:870,81,0	1/1:0,39:39:99:1205,114,0	1/1:1,44:45:99:1321,123,0	1/1:0,7:7:21.05:226,21,0
chr10	21739978	.	GCA	G	900.84	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.795;DP=776;FS=0.742;HRun=0;HaplotypeScore=133.2885;InbreedingCoeff=0.9017;MQ=52.28;MQ0=16;MQRankSum=2.643;QD=19.17;ReadPosRankSum=2.313;VQSLOD=3.8797;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,1:40:1.36:0,1,4	0/0:20,0:19:45.15:0,45,769	0/0:40,0:7:10.56:0,11,148	0/0:43,0:11:24.08:0,24,406	1/1:2,19:20:30.02:392,30,0	0/0:32,0:32:87.26:0,87,1436	0/0:33,0:33:72.19:0,72,1208	0/0:26,0:26:63.19:0,63,985	0/0:24,0:24:54.18:0,54,919	0/0:19,0:19:39.13:0,39,657	0/0:18,0:18:48.15:0,48,796	0/0:38,0:38:69.22:0,69,1155	0/0:28,0:28:81.26:0,81,1355	0/0:30,0:30:66.23:0,66,1131	0/0:16,0:16:36.12:0,36,617	0/0:19,0:19:33.11:0,33,549	0/0:17,0:17:39.07:0,39,609	0/0:22,0:22:60.19:0,60,983	0/0:14,0:14:30.09:0,30,485	0/0:22,0:22:41.88:0,42,720	0/0:63,0:60:99:0,123,2078	1/1:2,24:25:48.16:630,48,0	0/0:23,0:23:47.94:0,48,795	0/0:32,0:32:60.21:0,60,1028	0/0:29,0:29:60.19:0,60,1002	0/0:31,0:31:84.25:0,84,1354	0/0:31,0:30:66.21:0,66,1098	0/0:17,0:17:51.17:0,51,867
chr10	21739989	.	TGCGCAC	T	32.67	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.215;DP=785;FS=0.000;HRun=0;HaplotypeScore=171.6024;InbreedingCoeff=0.8473;MQ=52.56;MQ0=19;MQRankSum=-3.336;QD=0.96;ReadPosRankSum=-0.178;VQSLOD=2.4253;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:16,17:34:5.75:113,6,0	0/0:19,0:18:48.13:0,48,1708	0/0:44,0:10:20.94:0,21,576	0/0:45,0:12:36.11:0,36,893	0/0:21,0:20:35.91:0,36,889	0/0:37,0:37:99:0,102,3685	0/0:28,0:28:75.05:0,75,2588	0/0:28,0:27:66.27:0,66,2518	0/0:24,0:24:54.66:0,55,1978	0/0:20,0:20:54.19:0,54,1775	0/0:15,0:15:45.15:0,45,1665	0/0:37,0:37:72.25:0,72,2682	0/0:28,0:28:84.27:0,84,2826	0/0:30,0:30:72.03:0,72,2682	0/0:18,0:18:54.19:0,54,1938	0/0:22,0:23:12.35:0,12,1595	0/0:18,0:18:48.06:0,48,1469	0/0:22,0:22:60.21:0,60,2053	0/0:14,0:14:42.14:0,42,1186	0/0:21,0:21:48.15:0,48,1779	0/0:65,0:62:99:0,138,4575	0/0:27,0:26:57.20:0,57,1435	0/0:25,0:25:57.02:0,57,2058	0/0:32,0:32:65.76:0,66,2464	0/0:27,0:27:60:0,60,2253	0/0:33,0:33:98.92:0,99,3299	0/0:30,0:29:68.95:0,69,2204	0/0:18,0:18:53.75:0,54,1753
chr10	21740961	.	GTCATCATCA	G	2969.41	PASS	AB=0.983;AC=26;AF=0.464;AN=56;BaseQRankSum=-9.187;DP=997;FS=9.049;HRun=0;HaplotypeScore=393.8327;InbreedingCoeff=-0.0687;MQ=46.80;MQ0=7;MQRankSum=-0.611;QD=4.06;ReadPosRankSum=-3.256;VQSLOD=0.4893;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:21:8:0,8,310	1/1:15,0:15:4.35:11,4,0	0/0:26,0:18:6.02:0,6,217	0/0:28,0:18:9.03:0,9,239	1/1:13,17:31:48.06:1044,48,0	1/1:36,0:36:15.56:57,16,0	0/0:45,0:45:1.49:0,1,90	0/0:72,0:66:40.45:0,40,817	0/1:32,0:32:3.82:4,0,204	0/1:38,0:38:58.06:58,0,1003	0/1:24,0:24:2.82:3,0,52	0/1:37,0:37:15.53:16,0,39	0/1:42,0:42:99:208,0,99	0/1:42,0:42:16.28:16,0,36	0/1:45,0:64:99:205,0,198	0/1:57,0:57:11.66:78,0,12	0/1:38,0:38:48.03:48,0,297	0/1:23,0:23:10.33:10,0,300	0/1:27,0:25:38.70:39,0,349	0/1:38,0:38:15.10:15,0,76	0/0:22,0:22:1.38:0,1,20	1/1:14,17:31:48.16:1242,48,0	1/1:29,0:27:3.01:7,3,0	0/1:34,0:34:1.32:1,0,66	1/1:49,0:49:14.20:35,14,0	0/0:40,0:39:39.39:0,39,1063	0/1:42,0:41:37.68:38,0,57	0/0:12,0:12:5.20:0,5,28
chr10	21741385	.	T	TTACAC	25678.20	PASS	AB=0.997;AC=36;AF=0.643;AN=56;BaseQRankSum=-16.326;DP=825;FS=6.709;HRun=0;HaplotypeScore=184.5007;InbreedingCoeff=0.3887;MQ=87.08;MQ0=0;MQRankSum=-9.206;QD=40.44;ReadPosRankSum=-1.010;VQSLOD=4.2831;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,105,2149	0/1:10,0:10:8.55:9,0,141	0/0:34,0:34:81.26:0,81,1533	0/0:32,0:32:81.21:0,81,1519	1/1:5,23:30:48.16:1372,48,0	1/1:1,17:19:51.18:1578,51,0	1/1:8,19:29:39.13:1203,39,0	1/1:13,16:31:69.24:1927,69,0	1/1:7,23:32:72.25:2209,72,0	1/1:5,22:28:72.03:1968,72,0	1/1:2,13:16:33.11:996,33,0	1/1:4,35:39:99:3023,99,0	1/1:5,32:37:93.32:2839,93,0	1/1:8,28:38:75.26:2311,75,0	0/0:32,0:32:81.26:0,81,1628	0/1:35,0:35:45.74:46,0,281	0/1:33,0:33:55.02:55,0,228	0/1:18,0:18:30.97:31,0,160	0/1:27,0:27:98.84:149,0,99	0/1:35,0:35:99:174,0,315	0/1:42,0:42:36.05:36,0,344	1/1:3,24:28:69.23:1935,69,0	1/1:3,10:14:24.08:742,24,0	1/1:3,27:30:63.22:1903,63,0	1/1:2,22:20:36.12:1114,36,0	0/1:38,1:39:57.87:58,0,1937	0/0:45,0:45:99:0,129,2617	0/0:10,0:10:30.10:0,30,629
chr10	21741979	.	ATGCTGAAGAACATGTCTCATGCATGCTGAAGAATATAGAACATGCG	A	228.39	PASS	AB=1.000;AC=30;AF=0.625;AN=48;BaseQRankSum=5.414;DP=1095;FS=1.142;HRun=0;HaplotypeScore=578.4202;InbreedingCoeff=0.5352;MQ=29.98;MQ0=222;MQRankSum=-3.782;QD=0.32;ReadPosRankSum=-1.329;VQSLOD=-0.2291;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:63,0:42:30.10:0,30,914	0/0:28,0:23:17.94:0,18,571	./.	./.	1/1:34,17:42:0.47:1,0,0	1/1:17,0:11:4.21:23,4,0	1/1:46,0:22:2.25:6,2,0	1/1:40,0:6:1.25:3,1,0	0/1:50,0:34:0:1,0,0	0/1:50,0:36:1.92:73,0,2	1/1:14,0:10:2.49:6,2,0	1/1:50,0:26:1.72:5,2,0	1/1:56,0:27:1.55:5,2,0	1/1:66,0:32:1.25:5,1,0	1/1:68,0:55:1.25:4,1,0	0/0:100,0:63:25.60:0,26,1131	0/0:28,0:18:8.88:0,9,301	0/0:10,0:9:8.99:0,9,216	1/1:34,0:10:8.95:66,9,0	0/0:33,0:28:20.81:0,21,609	0/0:46,0:15:8.90:0,9,275	1/1:42,13:42:2.84:14,3,0	0/1:18,0:16:0:0,0,0	./.	0/1:22,0:15:0:0,0,0	1/1:41,0:20:13.45:90,13,0	1/1:38,0:26:10.15:63,10,0	./.
chr10	21743382	.	GT	G	8997.06	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=10.467;DP=510;FS=0.000;HRun=2;HaplotypeScore=50.6652;InbreedingCoeff=0.9727;MQ=77.51;MQ0=0;MQRankSum=1.251;QD=36.72;ReadPosRankSum=1.168;VQSLOD=5.1115;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:27.09:0,27,404	0/0:7,0:7:21.07:0,21,315	0/0:15,0:15:35.07:0,35,618	0/0:6,0:6:18.06:0,18,256	0/0:29,0:29:81.27:0,81,1196	1/1:0,16:16:48.16:623,48,0	1/1:0,16:16:45.15:584,45,0	1/1:1,34:35:99:1249,99,0	1/1:0,16:16:42.14:545,42,0	1/1:0,27:27:81.26:1048,81,0	1/1:0,16:16:48.16:623,48,0	1/1:0,23:23:66.21:857,66,0	1/1:0,17:17:48.16:623,48,0	1/1:0,21:21:60.20:779,60,0	0/0:18,0:18:54.17:0,54,789	0/0:17,0:17:48.16:0,48,718	0/0:25,0:25:75.25:0,75,1121	0/0:16,0:16:48.16:0,48,710	0/0:20,0:20:60.20:0,60,898	0/0:20,0:20:57.18:0,57,829	0/0:13,0:13:39.09:0,39,559	0/0:9,0:9:27.09:0,27,405	1/1:1,14:15:39.13:506,39,0	1/1:0,12:12:33.11:429,33,0	1/1:0,31:31:87.28:1129,87,0	0/0:27,2:29:3.34:0,3,1047	0/0:26,0:26:75.25:0,75,1123	0/0:6,0:6:15.05:0,15,225
chr10	21743949	.	A	AT	5786.23	PASS	AB=1.000;AC=25;AF=0.463;AN=54;BaseQRankSum=-9.365;DP=410;FS=1.791;HRun=6;HaplotypeScore=57.1149;InbreedingCoeff=0.9059;MQ=71.22;MQ0=0;MQRankSum=0.278;QD=28.64;ReadPosRankSum=-2.207;VQSLOD=4.6207;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:33.07:0,33,337	0/0:8,0:8:18.04:0,18,183	0/0:9,0:8:11.94:0,12,118	0/1:9,0:8:8.12:8,0,108	0/0:12,0:12:33.07:0,33,336	1/1:1,18:19:54.17:679,54,0	1/1:0,7:7:21.07:264,21,0	1/1:7,21:28:66.20:817,66,0	1/1:0,11:11:24.08:302,24,0	1/1:1,18:19:54.16:667,54,0	1/1:5,19:24:51.16:639,51,0	1/1:2,11:13:33.11:413,33,0	1/1:4,14:18:36.10:440,36,0	1/1:4,14:18:39.07:461,39,0	0/0:15,0:15:36.08:0,36,367	0/0:15,0:15:36.07:0,36,367	0/0:24,0:24:69.13:0,69,695	0/0:16,0:16:35.91:0,36,361	0/0:26,0:26:69.14:0,69,698	0/0:18,0:18:48.10:0,48,489	0/0:6,0:6:18.04:0,18,184	./.	1/1:1,11:13:30.10:376,30,0	1/1:0,7:7:18.02:208,18,0	1/1:2,14:16:42.09:510,42,0	0/0:15,1:16:4.34:0,4,354	0/0:19,0:17:45.09:0,45,459	0/0:10,0:10:21.05:0,21,214
chr10	21744378	.	CTTT	C	7818.57	PASS	AB=0.590;AC=37;AF=0.661;AN=56;BaseQRankSum=0.780;DP=536;FS=27.097;HRun=12;HaplotypeScore=136.0550;InbreedingCoeff=0.7576;MQ=73.39;MQ0=0;MQRankSum=-3.505;QD=20.52;ReadPosRankSum=9.535;VQSLOD=0.5672;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:87.19:0,87,1408	1/1:2,6:8:15.04:190,15,0	0/0:11,0:11:17.73:0,18,262	0/0:15,0:14:13.69:0,14,299	0/0:13,0:26:71.77:0,72,676	1/1:3,18:21:42.12:531,42,0	1/1:2,11:13:27.05:341,27,0	0/0:13,0:41:61.31:0,61,353	1/1:2,19:21:36.05:455,36,0	1/1:5,20:25:50.92:592,51,0	0/1:12,14:26:8.26:241,0,8	1/1:3,17:20:48.12:604,48,0	1/1:5,16:21:42.06:528,42,0	1/1:1,12:12:30.09:379,30,0	0/1:4,1:15:20.69:21,0,31	1/1:4,17:21:42.09:531,42,0	1/1:2,16:18:39.11:493,39,0	1/1:3,11:14:29.64:359,30,0	1/1:4,13:17:26.35:338,26,0	1/1:4,15:19:33.01:417,33,0	1/1:4,14:18:30.06:379,30,0	0/0:4,0:12:30.78:0,31,270	1/1:3,14:17:9.60:321,10,0	1/1:3,24:29:56.95:752,57,0	1/1:0,14:14:27.04:341,27,0	0/0:3,0:10:13.46:0,13,64	0/1:5,1:31:6.52:7,0,47	0/0:4,0:10:8.57:0,9,27
chr10	21744732	.	GA	G	3166.37	PASS	AB=0.556;AC=29;AF=0.518;AN=56;BaseQRankSum=9.911;DP=291;FS=2.399;HRun=9;HaplotypeScore=32.8926;InbreedingCoeff=0.8622;MQ=73.03;MQ0=0;MQRankSum=-0.301;QD=21.25;ReadPosRankSum=0.765;VQSLOD=3.7532;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:30.09:0,30,346	0/0:1,0:1:3.01:0,3,35	0/0:17,0:15:30.07:0,30,323	0/0:11,0:8:15.01:0,15,154	0/0:18,0:19:50.98:0,51,568	1/1:3,10:13:27.01:247,27,0	1/1:0,4:4:9:82,9,0	1/1:2,24:26:72.03:654,72,0	1/1:0,4:4:12.01:110,12,0	1/1:1,9:10:27.01:247,27,0	1/1:2,15:17:45.02:412,45,0	1/1:1,8:9:21.01:192,21,0	1/1:0,10:10:24.01:220,24,0	1/1:1,10:11:30.02:275,30,0	0/0:9,0:9:24.07:0,24,277	0/0:8,0:8:18.05:0,18,208	0/0:18,0:18:45.12:0,45,508	0/0:21,0:20:54.09:0,54,595	0/0:10,0:9:30.09:0,30,342	0/0:9,0:9:18.05:0,18,208	0/0:5,0:5:12.04:0,12,138	0/0:3,0:3:6.02:0,6,69	1/1:0,5:5:15.01:137,15,0	0/1:1,4:5:22.61:70,0,23	1/1:0,5:5:15.01:137,15,0	1/1:2,8:10:24.01:220,24,0	1/1:1,8:9:21.01:192,21,0	1/1:0,11:11:21.01:192,21,0
chr10	21745121	.	CAAAA	C	6642.35	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-0.886;DP=536;FS=3.285;HRun=14;HaplotypeScore=110.9120;InbreedingCoeff=0.9257;MQ=71.98;MQ0=1;MQRankSum=-0.862;QD=24.69;ReadPosRankSum=1.398;VQSLOD=4.0444;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:16:31.26:0,31,679	0/0:1,0:8:20.64:0,21,160	0/0:21,0:15:21.06:0,21,381	0/0:24,0:16:0.66:0,1,232	1/1:6,0:24:21.07:52,21,0	1/1:2,19:21:51.12:722,51,0	1/1:1,20:21:51.15:721,51,0	1/1:7,1:26:55.01:438,55,0	1/1:5,11:16:9.85:315,10,0	1/1:2,19:23:63.17:860,63,0	1/1:6,9:15:23.97:340,24,0	1/1:4,16:20:45.09:636,45,0	1/1:6,16:22:42.09:593,42,0	1/1:4,18:22:48.13:666,48,0	0/0:7,0:24:34.36:0,34,215	0/0:7,0:22:39.11:0,39,235	0/0:3,0:23:40.27:0,40,255	0/0:3,0:20:42.11:0,42,297	0/0:5,0:19:39.22:0,39,256	0/0:3,0:15:35.22:0,35,216	0/0:0,0:12:29.24:0,29,169	1/1:3,0:12:9.93:25,10,0	1/1:2,10:12:28.81:377,29,0	1/1:5,11:16:24:340,24,0	1/1:1,16:19:42.06:558,42,0	0/0:17,1:18:2.59:0,3,764	0/0:26,0:27:63.22:0,63,1349	0/0:13,0:16:45.15:0,45,839
chr10	21746004	.	G	GAA	8904.35	PASS	AB=0.806;AC=50;AF=0.893;AN=56;BaseQRankSum=-0.341;DP=584;FS=2.875;HRun=12;HaplotypeScore=82.0078;InbreedingCoeff=0.4174;MQ=71.22;MQ0=0;MQRankSum=-0.359;QD=16.40;ReadPosRankSum=1.756;VQSLOD=4.1808;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:34:59.28:0,59,668	1/1:1,0:9:17.47:60,17,0	0/1:21,0:13:44.26:75,0,44	0/0:7,0:7:2.24:0,2,8	1/1:6,20:30:67.98:777,68,0	1/1:2,11:21:33.55:338,34,0	1/1:4,15:22:32.03:373,32,0	1/1:11,10:28:20.64:433,21,0	1/1:2,13:16:23.57:303,24,0	1/1:7,9:19:32.52:375,33,0	1/1:6,16:26:53.03:598,53,0	1/1:3,9:14:1.26:262,1,0	1/1:3,9:15:26.57:327,27,0	1/1:4,13:17:30.23:434,30,0	1/1:5,16:23:4.85:359,5,0	1/1:3,0:16:7.82:60,8,0	1/1:5,1:36:43.46:249,43,0	1/1:2,3:20:43.96:247,44,0	1/1:7,2:22:13.16:212,13,0	1/1:6,0:32:11.84:186,12,0	0/1:4,0:11:30.86:31,0,35	1/1:8,7:15:17.05:376,17,0	1/1:6,9:15:24.01:306,24,0	1/1:2,6:9:17.55:219,18,0	1/1:9,16:28:38.10:465,38,0	1/1:8,16:24:26.27:591,26,0	1/1:6,29:36:65.19:859,65,0	1/1:1,13:16:29.59:387,30,0
chr10	21746346	.	CTTTGTTTG	C	20064.76	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=10.817;DP=654;FS=1.079;HRun=0;HaplotypeScore=171.7821;InbreedingCoeff=0.9351;MQ=58.46;MQ0=4;MQRankSum=-7.056;QD=36.88;ReadPosRankSum=0.422;VQSLOD=4.7069;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:57.11:0,57,2820	1/1:2,6:8:12.04:308,12,0	0/0:20,0:15:21.03:0,21,595	0/0:21,0:15:18.06:0,18,536	1/1:6,25:31:63.22:1527,63,0	1/1:10,16:26:30.10:761,30,0	1/1:11,12:23:20.67:539,21,0	1/1:15,20:35:60.17:1102,60,0	1/1:9,9:18:15.02:382,15,0	1/1:8,25:33:75.25:1734,75,0	1/1:6,18:24:42.14:1038,42,0	1/1:10,10:20:18.06:462,18,0	1/1:9,12:21:21.07:539,21,0	1/1:8,22:30:57.20:1460,57,0	0/0:31,0:31:72.22:0,72,2525	1/1:6,24:30:56.94:1414,57,0	1/1:11,12:23:17.18:392,17,0	1/1:3,16:19:15.05:385,15,0	1/1:6,12:18:36.11:782,36,0	1/1:7,24:30:72.18:1687,72,0	1/1:8,6:14:6.02:125,6,0	1/1:7,13:20:27.05:628,27,0	1/1:7,12:19:30.10:757,30,0	1/1:10,9:19:12.04:281,12,0	1/1:4,17:21:36.12:921,36,0	1/1:9,20:29:60.19:1416,60,0	1/1:5,17:22:38.80:997,39,0	1/1:10,0:9:21.07:427,21,0
chr10	21746673	.	CT	C	5585.47	PASS	AB=0.957;AC=33;AF=0.589;AN=56;BaseQRankSum=10.875;DP=525;FS=1.144;HRun=11;HaplotypeScore=58.0345;InbreedingCoeff=0.9285;MQ=79.81;MQ0=0;MQRankSum=-1.006;QD=17.73;ReadPosRankSum=0.457;VQSLOD=5.7261;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:42.11:0,42,448	0/0:12,1:13:14.48:0,14,346	0/1:21,1:19:0.59:1,0,188	0/0:15,0:14:17.96:0,18,163	0/0:31,0:31:65.32:0,65,809	1/1:2,10:12:26.97:222,27,0	1/1:1,12:13:32.96:271,33,0	1/1:8,22:30:62.87:513,63,0	1/1:1,16:17:32.96:271,33,0	1/1:1,17:18:43.75:349,44,0	1/1:2,15:17:41.90:339,42,0	1/1:0,15:15:35.96:296,36,0	1/1:5,12:17:3.96:239,4,0	1/1:4,14:18:9.95:288,10,0	1/1:2,20:22:53.92:443,54,0	0/0:16,0:16:42.11:0,42,448	0/0:19,0:19:45.11:0,45,478	0/0:21,0:21:51.13:0,51,544	0/0:22,0:22:57.09:0,57,582	0/0:23,0:23:66.17:0,66,704	0/0:10,0:10:27.06:0,27,281	0/0:19,1:21:32.32:0,32,527	1/1:2,16:19:49.01:381,49,0	1/1:1,10:11:29.96:246,30,0	1/1:4,25:30:70.92:572,71,0	1/1:3,14:17:41.92:341,42,0	1/1:2,28:30:77.90:640,78,0	1/1:0,7:7:20.98:172,21,0
chr10	21748489	.	TGGG	T	9086.91	PASS	AB=1.000;AC=33;AF=0.589;AN=56;BaseQRankSum=5.429;DP=449;FS=24.424;HRun=13;HaplotypeScore=97.1341;InbreedingCoeff=0.8185;MQ=72.61;MQ0=0;MQRankSum=-1.609;QD=26.57;ReadPosRankSum=7.625;VQSLOD=1.6256;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:6:3.01:0,3,48	0/1:5,0:5:0.01:0,0,0	0/0:17,0:16:3.37:0,3,148	0/0:12,0:9:12.02:0,12,166	0/0:8,0:8:5.92:0,6,50	1/1:5,21:26:62.87:762,63,0	1/1:5,22:27:56.96:693,57,0	1/1:8,30:38:80.87:990,81,0	1/1:4,12:16:32.97:401,33,0	1/1:5,14:19:41.55:509,42,0	1/1:7,10:17:23.71:291,24,0	1/1:2,13:15:36.01:438,36,0	1/1:5,17:22:50.71:619,51,0	1/1:4,16:20:47.80:583,48,0	1/1:6,20:26:53.66:656,54,0	0/0:17,0:18:23.99:0,24,257	0/0:15,0:15:26.96:0,27,285	0/0:5,0:5:2.99:0,3,23	0/0:8,0:8:8.99:0,9,98	0/0:6,0:7:9.01:0,9,132	0/0:5,0:6:6.01:0,6,77	0/0:4,0:4:3.01:0,3,58	1/1:2,9:11:27.08:328,27,0	1/1:3,18:21:41.99:511,42,0	1/1:1,10:11:27.08:328,27,0	1/1:6,25:31:74.72:884,75,0	1/1:0,28:28:75.19:911,75,0	1/1:4,5:9:14.77:182,15,0
chr10	21748901	.	GGTGTGTGTGTGT	G	3631.54	PASS	AB=0.891;AC=31;AF=0.596;AN=52;BaseQRankSum=6.195;DP=560;FS=24.475;HRun=0;HaplotypeScore=187.7269;InbreedingCoeff=0.4608;MQ=65.00;MQ0=8;MQRankSum=-5.805;QD=11.14;ReadPosRankSum=-0.957;VQSLOD=0.9675;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:25:21.07:0,21,630	0/0:4,0:5:0.92:0,1,70	./.	./.	0/1:21,0:25:31.71:32,0,72	0/1:16,0:17:27.10:100,0,27	1/1:14,1:14:3.01:102,3,0	0/0:31,0:31:1.55:0,2,4	1/1:14,0:13:5.06:63,5,0	1/1:19,2:21:6.02:205,6,0	1/1:10,0:10:2.22:7,2,0	1/1:20,4:24:12.04:410,12,0	1/1:23,3:25:2.10:101,2,0	1/1:15,1:17:6.02:186,6,0	1/1:19,5:25:12.04:391,12,0	0/0:16,0:19:30.10:0,30,572	0/0:13,0:18:20.10:0,20,304	0/0:13,0:14:9.03:0,9,233	0/0:14,0:13:5.75:0,6,59	0/0:20,0:22:18.91:0,19,461	0/0:16,0:16:15.04:0,15,251	0/1:11,0:12:18.77:38,0,19	1/1:10,2:13:6.02:186,6,0	1/1:33,3:36:3.01:102,3,0	1/1:15,3:21:21.07:622,21,0	1/1:21,0:25:14.37:417,14,0	1/1:11,0:17:21.07:586,21,0	1/1:2,0:4:3.01:84,3,0
chr10	21749245	.	A	AGAT	1045.15	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-1.490;DP=617;FS=0.000;HRun=0;HaplotypeScore=105.6776;InbreedingCoeff=0.9960;MQ=77.41;MQ0=0;MQRankSum=-0.681;QD=31.67;ReadPosRankSum=2.518;VQSLOD=4.1532;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:53.80:0,54,756	0/0:8,0:8:24.08:0,24,345	0/0:22,0:22:34.92:0,35,461	0/0:24,0:23:42.14:0,42,593	0/0:19,0:19:33.11:0,33,475	0/0:34,0:34:90.30:0,90,1279	0/0:20,0:20:48.15:0,48,667	0/0:27,0:27:66.17:0,66,888	0/0:19,0:19:42.14:0,42,602	0/0:33,0:33:72.24:0,72,1030	0/0:19,0:19:45.15:0,45,643	0/0:24,0:24:57.19:0,57,818	0/0:28,0:28:63.19:0,63,871	0/0:16,0:16:33.11:0,33,473	1/1:11,21:33:57.19:1140,57,0	0/0:31,0:31:63.20:0,63,889	0/0:22,0:22:48.16:0,48,689	0/0:12,0:12:30.10:0,30,432	0/0:20,0:20:33.11:0,33,475	0/0:19,0:19:42.14:0,42,604	0/0:23,0:23:60.20:0,60,861	0/0:20,0:20:54.17:0,54,758	0/0:19,0:19:51.17:0,51,731	0/0:19,0:19:36.08:0,36,495	0/0:22,0:22:60.19:0,60,846	0/0:25,0:25:66.21:0,66,934	0/0:23,0:22:57.19:0,57,820	0/0:12,0:12:33.07:0,33,452
chr10	21749903	.	GTTT	G	9242.27	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=-3.059;DP=577;FS=0.755;HRun=13;HaplotypeScore=100.9372;InbreedingCoeff=0.9773;MQ=70.00;MQ0=1;MQRankSum=0.181;QD=26.79;ReadPosRankSum=7.065;VQSLOD=3.9429;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:45.13:0,45,823	0/0:3,0:16:23.77:0,24,347	0/0:18,0:11:15.04:0,15,199	0/0:14,0:11:7.63:0,8,68	0/0:36,0:37:96.21:0,96,1613	1/1:3,16:19:45.09:547,45,0	1/1:1,15:16:36.10:426,36,0	1/1:9,21:30:59.94:660,60,0	1/1:1,18:20:53.82:621,54,0	1/1:8,19:28:57.80:696,58,0	1/1:4,31:35:85.45:1035,85,0	1/1:3,8:12:26.62:290,27,0	1/1:3,19:24:60.09:711,60,0	1/1:1,18:19:39.07:474,39,0	1/1:4,16:20:42.01:492,42,0	0/0:7,0:22:39.09:0,39,537	0/0:3,0:14:16.81:0,17,173	0/0:6,0:9:18.06:0,18,284	0/0:9,0:28:69.15:0,69,1056	0/0:5,0:23:56.05:0,56,669	0/0:4,0:11:12.04:0,12,167	0/0:22,0:23:63:0,63,1080	1/1:2,18:20:54.09:628,54,0	1/1:1,15:16:33.07:401,33,0	1/1:2,16:18:38.77:474,39,0	1/1:6,22:28:63.11:766,63,0	1/1:5,24:29:69.15:839,69,0	1/1:5,5:10:14.99:182,15,0
chr10	21750220	.	GA	G	8897.81	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=5.847;DP=628;FS=3.716;HRun=9;HaplotypeScore=68.5358;InbreedingCoeff=0.9931;MQ=70.33;MQ0=0;MQRankSum=1.568;QD=23.35;ReadPosRankSum=0.541;VQSLOD=5.7680;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,1:25:44.69:0,45,745	0/0:9,0:9:27.08:0,27,311	0/0:11,0:10:21.02:0,21,221	0/0:10,0:10:11.90:0,12,95	0/0:35,1:36:69.18:0,69,1046	1/1:3,24:27:69.04:632,69,0	1/1:1,29:30:87.05:796,87,0	1/1:3,29:32:86.98:781,87,0	1/1:3,15:18:45.02:412,45,0	1/1:2,25:27:75.04:686,75,0	1/1:3,19:22:54.02:494,54,0	1/1:3,19:22:57.02:522,57,0	1/1:3,21:24:51.02:467,51,0	1/1:3,19:22:45.02:412,45,0	1/1:5,18:23:48.02:439,48,0	0/0:17,1:18:17.66:0,18,449	0/0:23,0:23:63.19:0,63,727	0/0:16,0:16:42.10:0,42,472	0/0:21,0:21:57.17:0,57,658	0/0:36,0:37:99:0,102,1167	0/0:13,0:13:33.09:0,33,372	0/0:28,0:28:72.20:0,72,819	1/1:4,16:20:44.53:434,45,0	1/1:1,9:10:24.01:220,24,0	1/1:1,26:27:72.04:659,72,0	1/1:2,32:34:96.04:874,96,0	1/1:2,31:33:90.05:824,90,0	1/1:0,10:10:27.01:247,27,0
chr10	21751073	.	TA	T	5078.96	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=17.652;DP=777;FS=1.086;HRun=3;HaplotypeScore=90.8951;InbreedingCoeff=0.9994;MQ=80.26;MQ0=0;MQRankSum=-2.099;QD=35.52;ReadPosRankSum=-2.372;VQSLOD=4.1905;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:61,0:61:99:0,184,2523	0/0:11,0:11:30.10:0,30,432	0/0:16,0:16:45.14:0,45,622	0/0:21,0:21:43.52:0,44,642	0/0:27,0:27:81.26:0,81,1143	0/0:30,0:30:84.27:0,84,1191	0/0:30,0:30:87.22:0,87,1159	1/1:0,45:45:99:1599,135,0	0/0:19,0:19:57.19:0,57,817	0/0:31,0:31:87.29:0,87,1252	0/0:23,0:23:69.22:0,69,972	0/0:34,0:34:99:0,102,1436	0/0:21,0:21:60.19:0,60,847	0/0:31,0:31:90.30:0,90,1294	1/1:3,26:29:75.24:930,75,0	0/0:39,0:39:99:0,117,1644	0/0:36,0:36:99:0,108,1554	0/0:20,0:20:57.17:0,57,796	0/0:30,0:30:87.29:0,87,1235	0/0:33,0:33:99:0,99,1354	0/0:25,0:25:66.22:0,66,949	0/0:19,0:19:57.19:0,57,821	0/0:24,0:24:72.23:0,72,1018	0/0:32,0:32:96.29:0,96,1344	0/0:21,0:21:60.20:0,60,864	1/1:0,34:34:99:1249,102,0	1/1:0,27:27:81.25:1004,81,0	1/1:0,8:8:24.08:297,24,0
chr10	21753353	.	A	AGGG	4586.46	PASS	AB=1.000;AC=31;AF=0.554;AN=56;BaseQRankSum=4.222;DP=492;FS=10.870;HRun=7;HaplotypeScore=108.9935;InbreedingCoeff=0.9030;MQ=86.63;MQ0=0;MQRankSum=-4.636;QD=21.53;ReadPosRankSum=-3.413;VQSLOD=0.9045;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:81.20:0,81,1084	0/0:13,0:13:36.12:0,36,491	0/1:30,0:29:43.28:43,0,342	0/0:26,0:24:35.48:0,35,419	0/0:24,0:24:57.18:0,57,776	1/1:4,9:14:27.07:492,27,0	1/1:2,5:10:15.01:227,15,0	1/1:16,0:28:46.63:425,47,0	1/1:2,3:6:9.03:180,9,0	1/1:7,3:10:24.08:441,24,0	1/1:6,4:10:11.63:174,12,0	1/1:4,8:12:21.07:435,21,0	1/1:4,8:12:24.08:469,24,0	1/1:4,7:13:18.04:326,18,0	0/0:25,0:25:66.21:0,66,901	0/0:22,0:22:60.17:0,60,796	0/0:26,0:26:72.23:0,72,978	0/0:25,0:25:63.19:0,63,859	0/0:20,0:20:48.10:0,48,624	0/0:27,0:27:75.19:0,75,1002	0/0:20,0:20:57.17:0,57,760	0/0:18,0:18:54.18:0,54,737	1/1:7,8:15:18.06:346,18,0	1/1:1,7:9:17.99:303,18,0	1/1:4,7:13:14.96:202,15,0	1/1:4,1:12:20.50:201,21,0	1/1:3,0:11:23.93:201,24,0	1/1:1,0:8:14.96:121,15,0
chr10	21753720	.	TGGGGGG	T	17819.60	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=1.920;DP=498;FS=6.070;HRun=14;HaplotypeScore=153.4480;InbreedingCoeff=0.9685;MQ=55.16;MQ0=2;MQRankSum=-8.296;QD=40.41;ReadPosRankSum=5.670;VQSLOD=2.3748;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:26:33.11:0,33,554	1/1:1,9:10:27.07:515,27,0	0/0:14,0:12:30.10:0,30,663	0/0:16,0:13:26.14:0,26,624	1/1:3,19:22:35.98:591,36,0	1/1:1,19:21:60.19:1071,60,0	1/1:3,21:24:63.21:1201,63,0	1/1:12,9:21:27.82:486,28,0	1/1:3,14:17:36.08:686,36,0	1/1:5,8:13:27.05:485,27,0	1/1:3,7:10:18.05:321,18,0	1/1:4,26:30:78.21:1487,78,0	1/1:8,14:22:36.01:686,36,0	1/1:3,15:18:39.10:743,39,0	1/1:3,22:25:60.16:1143,60,0	1/1:11,15:26:44.99:857,45,0	1/1:6,15:22:44.99:799,45,0	1/1:4,8:12:17.99:343,18,0	1/1:5,7:12:20.97:369,21,0	1/1:2,11:13:33.11:604,33,0	1/1:3,9:12:21.47:345,21,0	1/1:2,13:15:39.61:744,40,0	1/1:2,18:20:51.02:878,51,0	1/1:1,14:15:23.96:437,24,0	1/1:0,13:13:39.13:743,39,0	1/1:2,18:20:54.18:1029,54,0	1/1:4,20:24:57.12:1086,57,0	1/1:1,3:4:9.01:171,9,0
chr10	21754276	.	GTTGTTATTATTATTA	G	188.79	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=4.704;DP=257;FS=3.028;HRun=0;HaplotypeScore=108.3738;InbreedingCoeff=0.7704;MQ=93.51;MQ0=1;MQRankSum=2.865;QD=14.52;ReadPosRankSum=0.063;VQSLOD=1.9560;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:7:20.94:0,21,764	0/0:4,0:4:11.98:0,12,156	0/0:19,0:17:41.09:0,41,399	0/0:12,0:11:23.95:0,24,204	1/1:0,9:9:23.60:227,24,0	0/0:8,0:7:20.97:0,21,237	0/0:4,0:4:12:0,12,246	0/0:38,0:38:99:0,114,1240	0/0:7,0:7:21:0,21,598	0/0:8,0:8:23.99:0,24,536	0/0:8,0:8:23.93:0,24,372	0/0:3,0:3:6:0,6,247	0/0:10,0:10:26.99:0,27,757	0/0:4,0:4:11.87:0,12,288	0/0:7,0:7:20.99:0,21,300	0/0:2,0:2:6.02:0,6,171	0/0:22,0:22:50.88:0,51,821	0/0:14,0:14:41.94:0,42,651	0/0:9,0:9:21:0,21,242	0/0:7,0:7:20.99:0,21,312	0/0:6,0:6:17.84:0,18,230	1/1:4,0:4:8.99:75,9,0	0/0:8,0:8:20.88:0,21,361	0/0:3,0:3:5.99:0,6,48	0/0:8,0:8:24.02:0,24,997	0/0:8,0:8:21.04:0,21,632	0/0:10,0:10:26.96:0,27,865	0/0:8,0:8:23.99:0,24,621
chr10	21754279	.	G	GTTA	500.43	PASS	AC=12;AF=0.316;AN=38;BaseQRankSum=-4.144;DP=247;FS=0.000;HRun=0;HaplotypeScore=43.5420;InbreedingCoeff=0.4513;MQ=91.72;MQ0=3;MQRankSum=2.234;QD=12.21;ReadPosRankSum=-0.516;VQSLOD=2.7821;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:14.33:0,14,129	0/0:3,0:4:2.98:0,3,21	./.	./.	./.	./.	1/1:3,0:3:3.01:57,3,0	./.	1/1:4,2:6:6.02:114,6,0	0/0:8,0:8:3.01:0,3,39	1/1:6,2:9:3.01:57,3,0	0/0:2,0:2:3.01:0,3,39	0/0:9,0:9:6.02:0,6,78	0/0:4,0:4:3.01:0,3,39	./.	0/0:0,0:2:5.95:0,6,42	0/0:16,0:22:2.98:0,3,21	0/0:13,0:13:3.01:0,3,33	0/0:7,0:7:2.98:0,3,21	0/0:6,0:7:2.98:0,3,21	./.	./.	0/0:8,0:8:3.01:0,3,39	./.	0/0:10,0:9:12.04:0,12,156	1/1:4,2:6:6.02:114,6,0	1/1:6,3:9:9.03:171,9,0	1/1:6,2:8:6.02:114,6,0
chr10	21755472	.	GAAATGTTGTATT	G	3083.15	PASS	AB=0.643;AC=11;AF=0.204;AN=54;BaseQRankSum=6.731;DP=350;FS=14.027;HRun=0;HaplotypeScore=131.9888;InbreedingCoeff=0.8392;MQ=68.62;MQ0=0;MQRankSum=-7.618;QD=71.70;ReadPosRankSum=1.582;VQSLOD=3.0193;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:75.26:0,75,4175	1/1:1,3:4:9.03:338,9,0	0/0:13,0:12:21.82:0,22,1274	0/0:21,0:18:19.53:0,20,1292	0/0:18,0:18:54.17:0,54,2971	0/0:25,0:25:72.23:0,72,4030	0/0:12,0:12:36.12:0,36,1916	0/0:40,0:40:99:0,114,6415	0/0:4,0:4:12.04:0,12,453	0/0:10,0:10:30.10:0,30,1605	0/0:12,0:12:36.12:0,36,2027	0/0:11,0:11:33.11:0,33,2033	0/0:12,0:12:36.12:0,36,1954	0/0:16,0:16:48.16:0,48,2901	0/0:4,0:4:12.04:0,12,696	0/1:4,5:9:99:564,0,164	1/1:2,5:7:15.05:564,15,0	1/1:1,6:7:18.06:677,18,0	1/1:3,3:6:15.04:432,15,0	1/1:5,5:10:24.02:678,24,0	./.	0/0:7,0:7:21.07:0,21,1184	0/0:17,0:17:48.16:0,48,2681	0/0:4,0:4:12.04:0,12,740	0/0:17,0:17:51.18:0,51,3021	0/0:16,0:16:42.13:0,42,2333	0/0:13,0:13:36.12:0,36,2111	0/0:8,0:8:18.06:0,18,1109
chr10	21755558	.	G	GA	3070.55	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-0.482;DP=556;FS=1.676;HRun=6;HaplotypeScore=71.9670;InbreedingCoeff=0.9964;MQ=81.55;MQ0=0;MQRankSum=-7.739;QD=29.24;ReadPosRankSum=3.743;VQSLOD=4.3754;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:60.12:0,60,606	1/1:0,10:10:30.10:377,30,0	0/0:13,0:13:31.88:0,32,307	0/0:21,0:21:49.73:0,50,444	0/0:21,0:21:54.12:0,54,551	0/0:26,0:26:66.14:0,66,673	0/0:11,0:11:30.05:0,30,299	0/0:39,0:39:99:0,102,1035	0/0:14,0:14:39.09:0,39,398	0/0:22,0:22:63.14:0,63,643	0/0:18,0:18:54.10:0,54,543	0/0:18,0:18:51.12:0,51,520	0/0:34,0:34:96.21:0,96,979	0/0:33,0:33:96.22:0,96,979	0/0:30,0:30:87.20:0,87,887	1/1:3,23:23:32.59:724,33,0	1/1:1,10:11:27.08:329,27,0	1/1:2,5:7:15.05:189,15,0	1/1:6,14:20:48.15:593,48,0	1/1:1,18:19:54.17:679,54,0	1/1:1,11:12:30.10:377,30,0	0/0:18,0:18:48.11:0,48,490	0/0:19,0:19:54.12:0,54,551	0/0:11,0:11:30.07:0,30,306	0/0:26,0:26:75.16:0,75,759	0/0:20,0:20:54.11:0,54,544	0/0:19,0:19:51.11:0,51,520	0/0:16,0:16:42.09:0,42,429
chr10	21755613	.	ATG	A	1753.20	PASS	AB=0.926;AC=27;AF=0.500;AN=54;BaseQRankSum=8.410;DP=690;FS=0.000;HRun=0;HaplotypeScore=136.9374;InbreedingCoeff=0.2482;MQ=59.62;MQ0=13;MQRankSum=-4.736;QD=4.06;ReadPosRankSum=1.079;VQSLOD=2.9144;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:10,1:15:24.12:24,0,65	./.	0/0:26,0:10:0.47:0,0,1	0/0:32,0:17:1.82:0,2,5	1/1:4,11:15:9.97:105,10,0	0/0:29,0:29:30.02:0,30,470	0/0:23,0:23:41.27:0,41,595	1/1:22,14:31:2.37:297,2,0	0/0:30,1:31:53.75:0,54,960	0/1:27,2:28:43.60:44,0,577	0/1:15,0:15:13.42:13,0,246	0/0:21,1:22:16.46:0,16,655	0/0:44,0:43:79.72:0,80,1229	0/1:35,2:37:33.67:34,0,753	1/1:26,8:35:44.96:493,45,0	1/1:27,0:23:31.15:152,31,0	0/1:23,0:17:24.33:24,0,25	0/1:23,0:18:12.04:20,0,12	1/1:16,0:12:14.20:70,14,0	1/1:13,0:13:10.20:63,10,0	0/1:29,0:19:15.99:16,0,80	1/1:10,11:23:25.61:238,26,0	0/0:16,0:16:30.10:0,30,458	0/1:23,3:25:45.47:45,0,595	0/0:27,0:27:39.14:0,39,633	0/1:12,0:33:4.20:164,0,4	1/1:15,0:24:12.50:107,12,0	1/1:9,0:10:5.44:24,5,0
chr10	21755627	.	GTGTGT	G	1530.88	PASS	AB=0.890;AC=8;AF=0.143;AN=56;BaseQRankSum=8.219;DP=774;FS=5.047;HRun=0;HaplotypeScore=194.7092;InbreedingCoeff=0.1243;MQ=48.00;MQ0=38;MQRankSum=-8.320;QD=8.70;ReadPosRankSum=0.387;VQSLOD=2.3695;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:15:24.06:0,24,426	0/1:7,1:8:8.81:9,0,85	0/0:45,0:9:27.04:0,27,346	0/0:53,0:11:32.43:0,32,373	0/0:18,0:18:23.07:0,23,301	0/0:33,0:33:68:0,68,1595	0/0:23,0:23:60.20:0,60,1636	0/0:46,0:35:81.02:0,81,1396	0/0:31,0:30:80.89:0,81,2317	0/0:30,0:28:84.28:0,84,1893	0/0:12,0:12:27.09:0,27,659	0/0:26,0:26:72.24:0,72,1822	0/0:44,0:43:99:0,117,3207	0/0:39,0:38:99:0,108,2573	0/0:33,0:32:62.71:0,63,809	0/1:22,12:33:99:728,0,270	0/1:27,4:22:99:215,0,286	0/1:31,2:28:99:150,0,690	1/1:10,5:10:18.05:361,18,0	0/1:11,1:11:73.90:74,0,140	0/1:28,3:25:99:134,0,499	0/0:20,0:20:26.75:0,27,408	0/0:16,0:15:39.10:0,39,1099	0/0:33,0:32:78.82:0,79,1858	0/0:22,0:22:60.20:0,60,1627	0/0:32,0:31:43.40:0,43,547	0/0:17,0:17:16.46:0,16,263	0/0:7,0:7:15.88:0,16,170
chr10	21755633	.	G	GA	790.10	PASS	AB=0.921;AC=7;AF=0.125;AN=56;BaseQRankSum=8.806;DP=801;FS=3.825;HRun=0;HaplotypeScore=162.1746;InbreedingCoeff=0.1724;MQ=46.70;MQ0=45;MQRankSum=-6.927;QD=4.41;ReadPosRankSum=-0.637;VQSLOD=2.9063;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:17:26.76:0,27,245	0/0:8,0:7:9.03:0,9,115	0/0:60,1:8:22.32:0,22,291	0/0:57,0:9:23.11:0,23,289	0/0:17,0:16:17.80:0,18,172	0/0:30,0:30:62.87:0,63,826	0/0:24,0:23:60.20:0,60,834	0/0:50,0:39:99:0,107,1217	0/0:32,0:31:84.09:0,84,1125	0/0:29,0:26:72.02:0,72,931	0/0:11,0:11:26.98:0,27,333	0/0:27,0:27:75.16:0,75,1018	0/0:45,0:44:99:0,120,1634	0/0:39,0:38:99:0,105,1373	0/0:29,0:28:49.83:0,50,334	0/1:40,5:38:99:311,0,276	0/1:27,4:22:99:103,0,312	0/1:28,4:27:99:135,0,506	1/1:12,1:8:20.93:183,21,0	0/1:19,0:18:11.57:12,0,223	0/1:36,3:28:99:181,0,339	0/0:18,1:19:20.34:0,20,279	0/0:16,0:15:39.13:0,39,544	0/0:32,0:31:73.73:0,74,968	0/0:22,0:22:54.18:0,54,752	0/0:31,0:30:75.84:0,76,625	0/0:17,0:17:40.78:0,41,337	0/0:5,0:5:11.86:0,12,118
chr10	21755641	.	GTA	G	389.72	PASS	AB=0.987;AC=13;AF=0.232;AN=56;BaseQRankSum=5.522;DP=875;FS=24.203;HRun=0;HaplotypeScore=187.7594;InbreedingCoeff=-0.1399;MQ=45.43;MQ0=49;MQRankSum=-2.425;QD=0.97;ReadPosRankSum=-0.843;VQSLOD=1.2588;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:20:9.53:10,0,161	0/0:15,1:15:10.92:0,11,139	0/1:65,0:9:1.65:2,0,101	0/1:70,0:12:22.34:63,0,22	0/1:17,1:17:10.52:11,0,88	0/0:27,1:28:8.43:0,8,621	0/0:29,1:29:51.39:0,51,880	0/1:49,0:37:42.05:42,0,472	0/0:33,0:33:65.81:0,66,949	0/0:29,1:27:3.84:0,4,654	0/0:11,0:11:15.19:0,15,291	0/0:33,0:31:65.22:0,65,961	0/0:43,1:43:82.19:0,82,1371	0/1:38,1:38:36.47:36,0,1034	1/1:28,1:28:40.73:236,41,0	0/0:50,5:49:59.26:0,59,399	0/1:33,0:24:25.61:26,0,156	0/0:35,2:30:38.01:0,38,333	0/0:14,0:9:0.45:0,0,86	0/0:22,0:21:2.52:0,3,157	0/0:48,2:39:6.47:0,6,452	0/1:19,1:20:55.25:55,0,81	0/0:15,0:14:35.98:0,36,510	0/0:31,1:31:13.38:0,13,889	0/0:24,0:24:17.49:0,17,720	0/1:33,0:32:26.21:26,0,336	0/1:16,0:16:20.02:20,0,77	0/1:4,0:4:13.01:13,0,37
chr10	21755691	.	A	ATG	5754	PASS	AB=0.608;AC=8;AF=0.154;AN=52;BaseQRankSum=2.017;DP=1054;FS=4.658;HRun=0;HaplotypeScore=146.0221;InbreedingCoeff=0.1740;MQ=38.25;MQ0=192;MQRankSum=-5.269;QD=13.80;ReadPosRankSum=4.044;VQSLOD=4.5650;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:17:33.11:0,33,439	0/1:11,17:18:43.96:449,0,44	./.	./.	0/0:27,0:27:30.10:0,30,399	0/0:27,0:23:38.68:0,39,445	0/0:30,0:26:51.15:0,51,653	0/0:47,0:42:99:0,108,1417	0/0:31,0:27:44.63:0,45,562	0/0:23,0:20:54.18:0,54,719	0/0:19,0:19:38.90:0,39,518	0/0:29,0:28:63.21:0,63,839	0/0:51,0:47:87.06:0,87,1140	0/0:42,0:38:73.48:0,73,958	0/0:37,0:27:42.10:0,42,526	0/1:30,73:69:34.97:1409,0,35	1/1:15,40:29:46.68:804,47,0	0/1:12,33:26:53.61:828,0,54	0/1:12,16:14:3.84:504,0,4	0/1:22,29:33:42.76:485,0,43	0/1:33,72:61:27.48:1276,0,27	0/0:15,0:15:30.09:0,30,384	0/0:17,0:15:21.07:0,21,280	0/0:34,0:31:63.17:0,63,824	0/0:27,0:25:50.93:0,51,595	0/0:29,0:23:60.20:0,60,795	0/0:27,0:24:38.96:0,39,470	0/0:5,0:5:9.03:0,9,115
chr10	21755780	.	GTGCA	G	2248.31	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=18.440;DP=1200;FS=26.293;HRun=0;HaplotypeScore=303.5798;InbreedingCoeff=0.8866;MQ=49.01;MQ0=42;MQRankSum=-5.330;QD=5.89;ReadPosRankSum=3.070;VQSLOD=1.1016;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:31:53.89:0,54,1395	1/1:19,0:16:9.73:46,10,0	0/0:28,0:5:10.79:0,11,256	0/1:49,0:7:37.37:37,0,78	0/0:26,0:26:75.24:0,75,1817	0/0:32,0:31:75.11:0,75,1894	0/0:40,0:40:99:0,114,2805	0/0:77,0:61:99:0,161,3770	0/0:69,0:69:99:0,178,4403	0/0:47,0:45:99:0,125,3010	0/0:26,0:26:75.24:0,75,1790	0/0:51,0:50:99:0,137,3369	0/0:71,0:71:99:0,202,4966	0/0:60,0:60:99:0,159,3982	0/0:60,0:59:99:0,141,3613	1/1:72,1:60:39.34:217,39,0	1/1:32,2:29:49.81:368,50,0	1/1:25,1:26:67.87:493,68,0	1/1:27,0:16:21.89:190,22,0	1/1:43,0:38:11.90:144,12,0	1/1:111,0:95:99:951,171,0	0/0:23,0:23:57.73:0,58,1626	0/0:28,0:28:78.25:0,78,2006	0/0:33,0:32:78.17:0,78,1856	0/0:32,0:32:90.31:0,90,2112	0/0:41,0:40:99:0,114,2943	0/0:29,0:28:78.21:0,78,1928	0/0:13,0:13:39.13:0,39,962
chr10	21755782	.	GCA	G	6591.04	PASS	AB=0.957;AC=16;AF=0.286;AN=56;BaseQRankSum=17.295;DP=1180;FS=31.162;HRun=0;HaplotypeScore=252.4395;InbreedingCoeff=0.8212;MQ=49.19;MQ0=38;MQRankSum=-5.111;QD=16.56;ReadPosRankSum=2.952;VQSLOD=3.5984;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:30:53.78:0,54,1069	1/1:12,6:15:7.39:139,7,0	0/1:26,2:5:8.02:8,0,170	0/1:49,1:7:35.44:35,0,70	0/0:26,0:26:78.25:0,78,1447	0/0:32,0:31:75.52:0,76,1449	0/0:41,0:41:99:0,114,2201	0/0:76,1:63:99:0,172,3167	0/0:69,0:69:99:0,176,3400	0/0:43,0:42:99:0,106,2333	0/0:25,0:25:75.24:0,75,1371	0/0:49,0:48:99:0,124,2624	0/0:70,0:70:99:0,202,3837	0/0:63,0:63:99:0,169,3199	0/0:59,0:58:99:0,144,2797	1/1:31,34:55:45.16:591,45,0	1/1:11,23:30:54.17:807,54,0	1/1:6,19:25:72.20:1062,72,0	1/1:18,11:16:44.79:640,45,0	1/1:25,15:35:24.96:350,25,0	1/1:33,75:95:99:2959,184,0	0/0:22,0:22:57.72:0,58,1228	0/0:28,0:28:81.23:0,81,1562	0/0:31,0:31:78.21:0,78,1450	0/0:33,0:33:93.31:0,93,1715	0/0:41,0:40:99:0,114,2241	0/0:29,0:28:79.16:0,79,1482	0/0:13,0:13:39.13:0,39,731
chr10	21755804	.	ATG	A	1154.79	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=4.828;DP=1263;FS=0.590;HRun=0;HaplotypeScore=292.9191;InbreedingCoeff=0.6999;MQ=49.47;MQ0=32;MQRankSum=3.269;QD=8.08;ReadPosRankSum=2.745;VQSLOD=2.4360;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:30:44.83:0,45,733	0/0:20,3:23:23.52:0,24,313	0/0:35,0:8:14.48:0,14,211	0/0:50,0:13:28.53:0,29,423	0/0:28,0:28:75.26:0,75,1266	0/0:34,0:34:69.55:0,70,1130	0/0:40,0:40:99:0,108,1764	0/0:79,0:69:99:0,177,2773	0/0:53,1:54:99:0,116,1897	0/0:43,0:43:99:0,114,1859	0/0:25,0:25:72.24:0,72,1187	0/0:50,0:50:99:0,144,2350	0/0:74,0:74:99:0,205,3363	0/0:62,0:62:99:0,160,2662	1/1:7,58:59:96.63:1249,97,0	0/1:78,0:73:3.03:3,0,658	0/0:45,0:44:87.31:0,87,1316	0/0:32,1:33:54.26:0,54,1299	0/0:31,0:20:41.99:0,42,662	0/0:51,2:51:10.08:0,10,687	0/0:126,4:119:99:0,257,4133	0/0:24,0:24:33.23:0,33,859	0/0:27,0:27:66.20:0,66,1112	0/0:35,0:35:81.26:0,81,1335	0/0:24,0:24:63.20:0,63,1029	0/0:45,0:44:99:0,111,1871	0/0:27,0:26:64.13:0,64,1040	0/0:16,0:15:42.14:0,42,698
chr10	21755814	.	GTA	G	324.09	PASS	AB=0.979;AC=4;AF=0.071;AN=56;BaseQRankSum=7.354;DP=1320;FS=0.563;HRun=0;HaplotypeScore=286.2618;InbreedingCoeff=0.4596;MQ=48.79;MQ0=43;MQRankSum=3.413;QD=1.60;ReadPosRankSum=0.793;VQSLOD=1.5801;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,1:27:44.85:0,45,853	0/0:24,0:24:26.58:0,27,450	0/0:46,0:7:17.09:0,17,253	0/0:56,0:14:29.19:0,29,514	0/0:28,0:28:84.21:0,84,1470	0/0:32,1:33:72.54:0,73,1306	0/0:39,0:39:99:0,111,2060	0/0:72,0:67:99:0,192,3294	0/0:52,0:52:99:0,111,2190	0/0:42,0:42:99:0,114,2158	0/0:27,0:27:81.18:0,81,1414	0/0:53,0:53:99:0,153,2740	0/0:82,0:81:99:0,227,3988	0/0:63,0:63:99:0,169,3122	1/1:67,0:59:36.46:392,36,0	0/1:84,2:76:21.03:21,0,859	0/0:52,1:46:84.34:0,84,1632	0/0:43,0:38:58.82:0,59,1587	0/0:39,0:21:58.30:0,58,890	0/1:49,1:47:26.33:26,0,946	0/0:142,0:126:99:0,265,4821	0/0:21,0:22:37.22:0,37,969	0/0:27,0:27:75.18:0,75,1335	0/0:33,0:33:87.25:0,87,1572	0/0:25,0:25:72.04:0,72,1170	0/0:42,0:42:99:0,120,2164	0/0:26,0:25:70.12:0,70,1223	0/0:18,0:17:48.13:0,48,855
chr10	21755854	.	A	ATG	3738.05	PASS	AB=0.687;AC=7;AF=0.135;AN=52;BaseQRankSum=4.837;DP=1391;FS=0.000;HRun=0;HaplotypeScore=232.8846;InbreedingCoeff=-0.1556;MQ=41.57;MQ0=217;MQRankSum=-4.920;QD=6.94;ReadPosRankSum=-0.764;VQSLOD=2.4979;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:23:50.93:0,51,675	0/1:26,15:28:99:252,0,347	./.	./.	0/0:32,0:32:69.20:0,69,888	0/0:23,0:23:42.61:0,43,559	0/0:42,0:33:53.87:0,54,648	0/0:52,0:37:87.26:0,87,1123	0/0:56,0:54:89.95:0,90,1220	0/0:41,0:35:90.28:0,90,1175	0/0:28,0:27:66.20:0,66,849	0/0:49,0:49:99:0,117,1552	0/0:83,0:79:99:0,169,2190	0/0:59,0:55:99:0,115,1511	0/0:61,0:52:51.09:0,51,678	0/1:59,60:73:99:628,0,601	0/1:33,28:42:99:417,0,680	0/1:33,28:39:99:408,0,616	0/1:20,14:18:99:331,0,235	0/1:25,47:58:99:985,0,266	0/1:94,57:100:99:717,0,1086	0/0:24,0:24:39.02:0,39,519	0/0:29,0:29:57.11:0,57,742	0/0:39,0:37:85.14:0,85,1104	0/0:28,0:26:57.19:0,57,758	0/0:33,0:24:63.19:0,63,806	0/0:26,0:22:49.10:0,49,628	0/0:13,0:13:33.11:0,33,439
chr10	21755927	.	A	ATGTGTG	1917.78	PASS	AB=0.914;AC=8;AF=0.143;AN=56;BaseQRankSum=11.226;DP=1160;FS=22.444;HRun=0;HaplotypeScore=268.3851;InbreedingCoeff=0.0629;MQ=46.01;MQ0=89;MQRankSum=-2.337;QD=5.05;ReadPosRankSum=-3.420;VQSLOD=0.6712;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:33:22.94:0,23,1138	0/1:19,3:19:22.29:176,0,22	0/0:6,0:2:6:0,6,53	0/0:20,0:5:8.04:0,8,66	0/0:26,0:25:66.16:0,66,1277	0/0:23,0:23:44.21:0,44,1017	0/0:22,0:20:51.06:0,51,874	0/0:83,0:61:99:0,117,1901	0/0:53,0:52:99:0,121,2330	0/0:59,0:52:80.45:0,80,2487	0/0:22,0:20:57.15:0,57,1105	0/0:46,0:45:99:0,123,2075	0/0:70,0:67:99:0,153,2921	0/0:46,0:43:99:0,105,2016	0/0:61,0:61:99:0,147,2831	0/1:82,3:65:12.45:345,0,12	0/1:36,3:29:99:271,0,112	0/1:45,0:29:99:247,0,134	0/1:34,2:15:76.76:215,0,77	0/1:54,10:57:80.26:541,0,80	1/1:79,0:48:4.91:258,5,0	0/0:33,0:32:84.20:0,84,1650	0/0:34,0:35:87.23:0,87,1670	0/0:35,0:36:88.49:0,88,1530	0/0:34,0:32:81.08:0,81,1561	0/0:38,0:35:99:0,99,1971	0/0:23,0:21:54.11:0,54,1048	0/0:6,0:6:18.06:0,18,400
chr10	21756080	.	A	AAT	5036.27	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=13.282;DP=648;FS=1.901;HRun=0;HaplotypeScore=85.7384;InbreedingCoeff=0.9770;MQ=78.18;MQ0=0;MQRankSum=-5.426;QD=44.57;ReadPosRankSum=1.720;VQSLOD=6.4049;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:75.25:0,75,1148	1/1:1,11:12:36.12:693,36,0	0/0:15,0:15:39.13:0,39,594	0/0:16,0:16:45.15:0,45,688	0/0:39,0:39:99:0,102,1540	0/0:19,0:19:54.17:0,54,805	0/0:16,0:16:45.14:0,45,664	0/0:38,0:38:99:0,99,1474	0/0:27,0:27:75.22:0,75,1101	0/0:32,0:32:96.31:0,96,1431	0/0:23,0:22:69.22:0,69,1026	0/0:34,0:34:99:0,102,1540	0/0:33,0:33:93.32:0,93,1423	0/0:25,0:25:72.24:0,72,1102	0/0:32,0:32:90.30:0,90,1359	1/1:1,26:26:60.21:1158,60,0	1/1:2,16:18:48.14:889,48,0	1/1:2,5:7:15.05:290,15,0	1/1:4,10:14:33.10:604,33,0	1/1:4,25:29:69.24:1288,69,0	1/1:2,3:5:6.02:116,6,0	0/0:19,0:19:57.19:0,57,869	0/0:21,0:21:63.20:0,63,943	0/0:21,0:21:54.10:0,54,775	0/0:26,0:26:75.25:0,75,1129	0/0:35,0:35:99:0,99,1396	0/0:29,0:28:78.26:0,78,1193	0/0:7,0:7:21.07:0,21,322
chr10	21756927	.	TTACCCCTCAGCCTCTA	T	11426.95	PASS	AB=0.981;AC=16;AF=0.286;AN=56;BaseQRankSum=16.700;DP=629;FS=23.856;HRun=0;HaplotypeScore=270.6292;InbreedingCoeff=-0.2318;MQ=77.52;MQ0=1;MQRankSum=-12.638;QD=34.11;ReadPosRankSum=2.529;VQSLOD=2.7707;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:38,1:39:99:569,0,237	0/0:11,0:11:31.30:0,31,1129	0/0:26,0:26:65.20:0,65,1094	0/0:32,0:31:57.67:0,58,1048	0/0:17,0:17:48:0,48,2258	0/1:25,0:25:99:831,0,240	0/1:23,0:23:99:360,0,194	0/0:20,0:21:4.17:0,4,341	0/1:22,0:22:99:734,0,163	0/1:24,0:24:99:1179,0,101	0/1:18,1:19:99:497,0,172	0/1:22,1:23:99:419,0,159	0/1:27,0:27:99:965,0,210	0/1:27,0:27:9.80:1793,0,10	0/0:29,0:29:87.15:0,87,4257	0/0:30,0:30:83.67:0,84,4028	0/0:25,0:25:75.09:0,75,3467	0/0:16,0:15:44.98:0,45,1911	0/0:15,0:15:42.03:0,42,865	0/0:13,0:13:38.96:0,39,1673	0/0:33,0:32:93.15:0,93,4437	0/0:26,0:26:71.52:0,72,3276	0/1:18,0:18:97.98:326,0,98	0/1:19,0:19:99:358,0,101	0/1:13,1:14:64.02:406,0,64	0/1:25,1:26:34.41:1653,0,34	0/1:18,1:19:87.82:885,0,88	1/1:10,0:10:12.04:452,12,0
chr10	21756929	.	ACCCCTCAGCCTCTATC	A	14413.28	PASS	AB=1.000;AC=31;AF=0.554;AN=56;BaseQRankSum=13.250;DP=633;FS=8.652;HRun=0;HaplotypeScore=261.8352;InbreedingCoeff=0.9011;MQ=77.60;MQ0=1;MQRankSum=-11.948;QD=40.95;ReadPosRankSum=0.682;VQSLOD=2.8252;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,22:37:21.03:738,21,0	0/0:12,0:12:25.33:0,25,1092	0/0:25,0:25:17.99:0,18,490	0/0:34,0:33:18.95:0,19,641	0/0:19,0:19:39.13:0,39,2459	1/1:13,13:26:30.10:1079,30,0	1/1:12,13:25:12.04:474,12,0	0/1:19,0:19:11.58:119,0,12	1/1:8,12:20:21.07:903,21,0	1/1:7,17:24:44.97:1537,45,0	1/1:11,8:19:21.07:657,21,0	1/1:11,11:22:11.78:515,12,0	1/1:14,12:26:27.09:1188,27,0	1/1:3,23:26:48.16:2098,48,0	0/0:30,0:30:69.24:0,69,3965	0/0:30,0:30:55.43:0,55,3753	0/0:25,0:25:48.16:0,48,3074	0/0:15,0:14:27.09:0,27,1653	0/0:15,0:15:12.04:0,12,684	0/0:15,0:15:30.10:0,30,1849	0/0:34,0:33:78.25:0,78,4483	0/0:27,0:27:50.69:0,51,3325	1/1:8,10:18:15.05:446,15,0	1/1:8,11:19:12.04:457,12,0	1/1:8,6:14:13.29:515,13,0	1/1:7,20:27:57.18:2086,57,0	1/1:8,11:19:27.09:1072,27,0	1/1:0,11:11:12.04:528,12,0
chr10	21757323	.	TG	T	3107.42	PASS	AB=0.839;AC=30;AF=0.536;AN=56;BaseQRankSum=-5.948;DP=475;FS=7.240;HRun=11;HaplotypeScore=67.9699;InbreedingCoeff=0.5725;MQ=74.56;MQ0=2;MQRankSum=-1.455;QD=11.68;ReadPosRankSum=5.178;VQSLOD=3.0412;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,21:29:50.61:418,51,0	1/1:0,0:1:2.04:6,2,0	0/0:29,0:24:50.24:0,50,442	0/0:14,0:12:7.74:0,8,83	0/0:21,0:21:53.57:0,54,221	0/1:10,0:13:2.84:3,0,130	0/0:18,0:18:32.64:0,33,243	1/1:10,13:24:34.90:271,35,0	0/0:9,0:16:14.77:0,15,123	0/0:10,0:12:2.84:0,3,14	0/1:13,1:20:10.82:11,0,70	0/0:9,0:17:2.83:0,3,14	0/0:16,0:23:16.17:0,16,130	0/0:19,0:26:17.64:0,18,124	1/1:1,19:20:50.94:419,51,0	1/1:5,6:11:17.97:148,18,0	1/1:5,19:24:53.92:443,54,0	1/1:2,8:12:28.05:209,28,0	1/1:8,8:16:20.95:171,21,0	0/1:8,11:19:34.17:158,0,34	1/1:3,11:14:26.96:222,27,0	0/0:16,0:16:34.88:0,35,144	0/1:7,3:10:31.13:31,0,110	0/0:12,0:15:3:0,3,25	1/1:8,0:11:2.57:10,3,0	1/1:4,8:12:0.40:164,0,0	1/1:3,15:18:47.94:394,48,0	1/1:1,9:11:29:227,29,0
chr10	21757327	.	G	GA	1224.85	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-7.557;DP=442;FS=18.161;HRun=0;HaplotypeScore=66.6913;InbreedingCoeff=0.7885;MQ=76.10;MQ0=2;MQRankSum=-0.183;QD=32.23;ReadPosRankSum=4.649;VQSLOD=2.1353;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:58.40:0,58,413	0/0:2,0:2:5.96:0,6,46	0/0:33,0:27:77.84:0,78,848	0/0:15,0:11:16.03:0,16,201	1/1:0,21:21:60.20:816,60,0	0/0:15,0:15:36.75:0,37,305	0/0:15,0:15:26.06:0,26,229	0/0:21,0:21:59.62:0,60,444	0/0:16,0:16:24.52:0,25,256	0/0:14,0:14:11.10:0,11,120	0/0:14,0:14:1.08:0,1,147	0/0:12,0:12:6.71:0,7,66	0/0:18,0:18:20.66:0,21,200	0/0:21,0:21:30.68:0,31,308	0/0:22,0:22:59.59:0,60,440	0/0:10,0:10:23.85:0,24,179	0/0:25,0:25:68.52:0,69,500	0/0:12,0:12:35.70:0,36,256	0/0:12,0:12:32.83:0,33,254	0/0:20,0:20:53.74:0,54,448	0/0:12,0:12:29.78:0,30,217	1/1:0,17:17:39.13:529,39,0	0/0:10,0:10:20.99:0,21,236	0/0:11,0:11:24:0,24,211	0/0:9,0:9:20.58:0,21,158	0/0:12,0:12:35.71:0,36,278	0/0:16,0:16:46.68:0,47,324	0/0:12,0:12:35.71:0,36,257
chr10	21757464	.	G	GA	5808.18	PASS	AB=0.941;AC=27;AF=0.482;AN=56;BaseQRankSum=-11.256;DP=555;FS=9.303;HRun=10;HaplotypeScore=60.9140;InbreedingCoeff=0.8514;MQ=70.53;MQ0=0;MQRankSum=-1.436;QD=21.43;ReadPosRankSum=0.763;VQSLOD=5.5836;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:50.93:0,51,418	0/0:5,0:5:14.98:0,15,123	0/0:12,0:12:9.03:0,9,135	0/0:14,0:14:5.32:0,5,123	0/0:4,0:36:45.34:0,45,147	1/1:2,12:14:5.43:263,5,0	1/1:3,15:18:17.46:391,17,0	1/1:6,17:23:29.46:501,29,0	1/1:2,15:18:44.97:456,45,0	0/0:22,0:22:47.92:0,48,394	0/0:14,0:14:35.95:0,36,295	1/1:3,16:19:42.10:445,42,0	1/1:5,16:21:26.48:485,26,0	1/1:2,15:17:30.08:320,30,0	0/0:22,0:22:59.91:0,60,489	0/0:24,0:24:59.91:0,60,492	0/0:20,0:21:49.92:0,50,392	0/0:26,0:27:56.32:0,56,554	0/0:19,0:19:50.92:0,51,415	0/0:27,0:28:58.72:0,59,619	0/1:14,1:16:11.66:12,0,279	0/0:1,0:20:28.53:0,29,91	1/1:3,20:23:58.03:610,58,0	1/1:3,18:20:45.11:480,45,0	1/1:5,12:17:17.80:384,18,0	1/1:8,16:24:1.83:430,2,0	1/1:5,31:36:71.45:936,71,0	1/1:1,3:4:9.02:96,9,0
chr10	21757862	.	CAA	C	13450.07	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=10.929;DP=604;FS=1.327;HRun=3;HaplotypeScore=75.9791;InbreedingCoeff=0.9925;MQ=75.21;MQ0=0;MQRankSum=-0.232;QD=41.51;ReadPosRankSum=2.410;VQSLOD=4.6077;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:99:0,99,1903	0/0:13,0:13:39.13:0,39,745	0/0:10,0:10:30.10:0,30,570	0/0:14,0:14:38.66:0,39,621	0/0:32,0:32:90.30:0,90,1701	1/1:2,22:24:63.21:949,63,0	1/1:0,15:15:39.13:597,39,0	1/1:0,21:21:63.20:941,63,0	1/1:0,21:21:57.19:873,57,0	1/1:1,31:32:90.31:1378,90,0	1/1:0,25:25:72.24:1102,72,0	1/1:0,19:19:45.15:689,45,0	1/1:0,17:17:51.17:781,51,0	1/1:1,23:24:63.21:965,63,0	0/0:27,0:27:78.27:0,78,1507	0/0:25,1:26:26.30:0,26,1288	0/0:20,0:20:60.21:0,60,1151	0/0:20,0:20:60.21:0,60,1150	0/0:16,0:16:48.16:0,48,865	0/0:29,1:30:44.38:0,44,1629	0/0:18,0:18:54.18:0,54,1012	0/0:21,0:21:60.19:0,60,1127	1/1:0,25:25:66.22:1010,66,0	1/1:0,22:22:60.20:919,60,0	1/1:0,20:20:54.18:827,54,0	1/1:1,29:30:87.25:1270,87,0	1/1:0,25:25:66.22:1011,66,0	1/1:0,4:4:9.50:139,10,0
chr10	21759080	.	GAAA	G	5645.65	PASS	AB=0.742;AC=42;AF=0.750;AN=56;BaseQRankSum=-1.548;DP=428;FS=0.557;HRun=15;HaplotypeScore=80.0701;InbreedingCoeff=0.5066;MQ=81.93;MQ0=3;MQRankSum=-0.996;QD=16.75;ReadPosRankSum=3.453;VQSLOD=3.9440;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:24:64.37:0,64,908	1/1:4,2:6:2.93:34,3,0	0/1:35,0:19:5.23:5,0,100	0/0:21,0:16:1.73:0,2,84	0/0:9,0:19:26.92:0,27,150	1/1:4,13:19:38.95:410,39,0	1/1:4,16:23:41.39:420,41,0	1/1:11,25:36:55.95:716,56,0	0/1:5,10:16:11.97:239,0,12	1/1:7,15:22:12.33:440,12,0	1/1:2,6:8:17.82:168,18,0	1/1:2,11:13:24.02:269,24,0	1/1:4,13:19:20.86:408,21,0	0/1:2,9:13:0.05:165,0,0	0/0:12,1:24:9.76:0,10,411	1/1:1,11:13:29.93:304,30,0	1/1:1,6:7:15.03:168,15,0	1/1:1,6:8:11.95:119,12,0	1/1:1,12:13:29.95:315,30,0	0/1:8,2:10:7.05:87,0,7	1/1:4,4:9:3.64:105,4,0	0/0:1,0:3:2.49:0,2,6	1/1:6,2:11:5.87:80,6,0	1/1:0,6:6:11.99:134,12,0	1/1:4,12:16:15.02:312,15,0	1/1:6,12:19:18.33:309,18,0	1/1:1,9:12:32.90:338,33,0	1/1:0,3:3:9.03:101,9,0
chr10	21759093	.	AAAG	A	1420.47	PASS	AB=0.982;AC=25;AF=0.446;AN=56;BaseQRankSum=8.361;DP=430;FS=16.612;HRun=0;HaplotypeScore=90.5745;InbreedingCoeff=-0.4035;MQ=72.44;MQ0=3;MQRankSum=-4.574;QD=4.15;ReadPosRankSum=9.502;VQSLOD=-0.5284;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:62.62:0,63,901	0/0:3,0:3:0.38:0,0,28	0/1:26,0:11:14.34:14,0,81	0/1:19,0:13:16.96:17,0,147	0/0:20,0:20:28.99:0,29,176	0/1:17,1:18:8.73:126,0,9	1/1:20,0:20:13.29:147,13,0	0/1:34,0:34:99:141,0,223	0/1:18,0:18:51.12:51,0,115	0/1:27,0:27:79.57:80,0,158	0/1:9,0:9:29.22:29,0,42	0/1:15,0:15:21.71:71,0,22	1/1:17,2:19:18.68:248,19,0	0/1:16,1:17:53.01:53,0,92	0/0:25,0:25:48.53:0,49,480	0/1:15,0:15:41.40:70,0,41	0/1:8,0:8:29.27:33,0,29	0/1:8,0:8:12.31:22,0,12	0/1:19,0:19:73.18:73,0,145	0/1:4,1:5:12.65:45,0,13	0/0:10,0:10:2.30:0,2,118	0/0:3,0:3:5.19:0,5,21	0/1:6,0:6:24.50:32,0,24	0/1:9,0:9:38.86:39,0,51	0/1:15,1:16:16.04:115,0,16	0/1:18,0:18:57.63:64,0,58	0/1:13,0:13:2.49:78,0,2	1/1:3,0:3:8.07:34,8,0
chr10	21759754	.	T	TAC	1247.06	PASS	AB=0.890;AC=25;AF=0.521;AN=48;BaseQRankSum=-4.452;DP=590;FS=6.691;HRun=0;HaplotypeScore=100.8107;InbreedingCoeff=0.2967;MQ=74.13;MQ0=14;MQRankSum=-0.066;QD=3.59;ReadPosRankSum=-2.088;VQSLOD=1.0294;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:25:13.15:93,0,13	0/0:7,0:8:6.15:0,6,29	./.	./.	1/1:18,0:18:6.02:85,6,0	1/1:20,0:20:10.24:114,10,0	1/1:28,5:35:12.04:177,12,0	./.	1/1:12,4:17:5.63:55,6,0	1/1:14,0:19:14.97:126,15,0	1/1:18,0:18:5.53:42,6,0	0/1:21,2:23:17.03:136,0,17	0/1:19,4:23:22.95:79,0,23	0/1:20,6:27:30.26:117,0,30	0/1:14,2:18:20.22:20,0,26	0/0:9,0:17:19.89:0,20,98	0/0:22,0:31:21.41:0,21,105	0/0:10,0:15:15.29:0,15,81	0/0:9,0:10:2.84:0,3,14	0/0:11,0:14:8.52:0,9,42	0/1:16,0:16:0:0,0,0	1/1:11,5:17:6.02:88,6,0	1/1:18,0:18:9.01:107,9,0	1/1:14,13:25:9.03:132,9,0	0/1:18,3:21:26.05:38,0,26	0/0:16,0:16:5.64:0,6,34	0/0:19,0:19:15.02:0,15,150	./.
chr10	21760522	.	G	GA	4466.58	PASS	AB=0.556;AC=15;AF=0.268;AN=56;BaseQRankSum=-13.668;DP=615;FS=1.602;HRun=9;HaplotypeScore=59.2284;InbreedingCoeff=0.9282;MQ=77.54;MQ0=0;MQRankSum=-0.610;QD=24.01;ReadPosRankSum=0.280;VQSLOD=5.6221;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:50.99:0,51,443	0/1:2,8:10:5.04:165,0,5	0/0:23,0:22:35.95:0,36,308	0/0:15,0:15:15.11:0,15,192	0/0:29,0:29:80.98:0,81,703	0/0:30,0:30:86.98:0,87,755	0/0:26,0:26:62.93:0,63,538	1/1:9,24:33:72.18:788,72,0	0/0:11,0:11:32.99:0,33,287	0/0:16,0:16:33.44:0,33,288	0/0:28,0:28:68.97:0,69,599	0/0:21,0:21:56.99:0,57,495	0/0:17,0:17:44.99:0,45,391	0/0:26,0:26:65.93:0,66,566	0/0:17,0:17:44.96:0,45,387	1/1:4,18:22:25.07:505,25,0	1/1:2,24:29:74.70:773,75,0	1/1:4,15:19:36.10:398,36,0	1/1:10,23:33:46.59:729,47,0	1/1:4,20:24:57.15:631,57,0	1/1:1,15:16:44.95:479,45,0	0/0:22,0:22:56.97:0,57,495	0/0:24,0:24:62.95:0,63,538	0/0:14,0:14:32.98:0,33,286	0/0:25,0:26:62.02:0,62,527	0/0:25,0:25:71.97:0,72,622	0/0:28,0:28:62.97:0,63,546	0/0:12,0:12:32.98:0,33,286
chr10	21762510	.	CGTGTGTGTGT	C	6188.90	PASS	AB=1.000;AC=32;AF=0.571;AN=56;BaseQRankSum=-1.733;DP=602;FS=3.008;HRun=0;HaplotypeScore=210.2713;InbreedingCoeff=0.2560;MQ=68.73;MQ0=11;MQRankSum=-2.987;QD=15.24;ReadPosRankSum=5.028;VQSLOD=3.4098;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:93.21:0,93,1708	0/0:11,0:10:7.11:0,7,71	0/0:43,0:26:58.26:0,58,762	0/0:40,0:29:78.51:0,79,1064	0/0:20,0:20:4.83:0,5,71	0/1:17,0:17:49.80:341,0,50	1/1:21,0:21:42.11:609,42,0	1/1:22,0:22:57.36:660,57,0	1/1:11,0:11:13.58:88,14,0	1/1:22,0:22:34:810,34,0	1/1:11,13:23:15.72:151,16,0	1/1:24,0:24:26.57:683,27,0	1/1:27,0:27:19.06:809,19,0	0/1:21,0:20:23.53:417,0,24	0/1:26,0:26:17.14:33,0,17	0/1:25,0:22:47.93:48,0,84	0/1:47,0:45:31.80:32,0,300	0/1:13,0:13:13.29:13,0,72	0/1:14,0:13:5.36:5,0,140	0/1:9,0:9:1.53:2,0,41	0/0:36,0:35:19.95:0,20,190	0/0:13,0:13:2.82:0,3,25	1/1:8,0:8:15.04:204,15,0	0/1:27,0:26:70.10:349,0,70	0/1:15,0:15:8.82:273,0,9	1/1:12,0:12:33.01:405,33,0	1/1:17,0:17:13.44:144,13,0	1/1:4,0:3:8.99:113,9,0
chr10	21762516	.	TGTGTGC	T	5113.44	PASS	AB=1.000;AC=46;AF=0.821;AN=56;BaseQRankSum=-0.442;DP=566;FS=1.716;HRun=0;HaplotypeScore=180.5703;InbreedingCoeff=0.2272;MQ=62.18;MQ0=16;MQRankSum=-1.356;QD=10.29;ReadPosRankSum=1.404;VQSLOD=3.9020;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:25.45:0,25,583	1/1:10,0:9:20.89:164,21,0	0/1:38,0:21:20.59:21,0,135	0/0:36,0:25:20.22:0,20,387	1/1:19,0:19:29.61:241,30,0	0/1:20,0:19:20.48:158,0,20	1/1:20,0:20:38.85:310,39,0	1/1:15,0:15:29.01:241,29,0	1/1:11,0:11:1.15:4,1,0	0/1:21,0:21:0.83:367,0,1	1/1:21,0:20:4.28:19,4,0	1/1:23,0:23:18.03:296,18,0	1/1:26,0:25:3.52:351,4,0	0/1:19,0:18:30.06:175,0,30	1/1:25,0:25:47.68:376,48,0	1/1:27,0:23:26.32:234,26,0	1/1:46,0:43:9.03:472,9,0	1/1:11,0:11:21.17:180,21,0	1/1:15,0:13:18.82:133,19,0	1/1:9,0:9:10.24:78,10,0	1/1:27,0:26:50.88:415,51,0	1/1:13,0:13:11.30:98,11,0	1/1:8,0:8:11.81:85,12,0	0/1:26,0:25:34.50:158,0,34	0/1:12,0:12:13.30:99,0,13	1/1:3,9:12:20.88:201,21,0	1/1:2,15:17:7.91:154,8,0	1/1:6,0:5:11.89:84,12,0
chr10	21762520	.	TGC	T	5698.73	PASS	AB=0.986;AC=52;AF=0.929;AN=56;BaseQRankSum=1.222;DP=548;FS=7.355;HRun=0;HaplotypeScore=146.7521;InbreedingCoeff=0.3018;MQ=56.48;MQ0=16;MQRankSum=-0.737;QD=11.02;ReadPosRankSum=-0.502;VQSLOD=3.8425;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:38,0:38:99:177,0,364	1/1:10,0:9:20.89:164,21,0	0/1:34,0:18:25.20:25,0,134	0/0:31,0:20:19.75:0,20,386	1/1:19,0:19:29.93:242,30,0	1/1:24,2:25:19.85:233,20,0	1/1:20,0:20:38.79:310,39,0	1/1:13,0:13:29.47:254,29,0	1/1:0,10:10:2.88:44,3,0	1/1:23,0:23:43.60:452,44,0	1/1:18,1:18:5.93:62,6,0	1/1:22,2:24:36.77:353,37,0	1/1:25,0:24:38.43:383,38,0	1/1:19,0:18:7.92:184,8,0	1/1:23,1:24:47.67:375,48,0	1/1:25,1:22:26.82:251,27,0	1/1:42,0:39:57.12:545,57,0	1/1:11,0:11:25.46:189,25,0	1/1:11,0:8:23.83:174,24,0	1/1:9,0:9:8.99:75,9,0	1/1:23,0:22:50.88:415,51,0	1/1:13,0:13:11.65:98,12,0	1/1:8,0:8:11.81:85,12,0	1/1:26,0:25:23.46:184,23,0	1/1:12,0:12:4.52:104,5,0	1/1:9,0:9:20.86:156,21,0	1/1:16,0:16:8.14:65,8,0	1/1:6,0:5:14.86:104,15,0
chr10	21762568	.	T	TGAGAGAGA	9609.93	PASS	AB=1.000;AC=45;AF=0.833;AN=54;BaseQRankSum=5.670;DP=515;FS=6.509;HRun=0;HaplotypeScore=161.1041;InbreedingCoeff=0.5882;MQ=55.08;MQ0=17;MQRankSum=-7.050;QD=26.11;ReadPosRankSum=-0.184;VQSLOD=4.1494;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:40:74.12:0,74,2228	1/1:10,0:9:9.03:263,9,0	0/0:26,0:18:54.10:0,54,1327	0/0:35,0:24:63.55:0,64,1535	1/1:13,0:12:3.01:50,3,0	1/1:27,0:26:26.13:576,26,0	1/1:10,0:10:8.77:134,9,0	1/1:23,0:22:65.93:1314,66,0	1/1:9,0:9:6.02:138,6,0	1/1:22,0:21:56.90:1222,57,0	1/1:10,0:9:9.02:167,9,0	1/1:26,0:26:5.38:43,5,0	1/1:20,0:18:25.73:425,26,0	1/1:9,13:23:5.92:52,6,0	1/1:18,0:16:11.89:232,12,0	1/1:22,0:21:27.60:460,28,0	1/1:28,0:25:35.29:797,35,0	1/1:9,0:9:8.63:105,9,0	1/1:12,0:11:25.21:664,25,0	1/1:12,0:12:9.03:231,9,0	./.	1/1:8,0:8:2.99:24,3,0	1/1:10,0:10:6.01:125,6,0	0/0:30,0:28:2.78:0,3,24	1/1:13,0:13:11.40:317,11,0	0/1:19,0:18:38.70:1124,0,39	1/1:18,0:16:31.88:670,32,0	1/1:6,0:6:15.05:477,15,0
chr10	21762570	.	T	TGAGAGAGAGA	14968.30	PASS	AB=1.000;AC=47;AF=0.870;AN=54;BaseQRankSum=1.458;DP=585;FS=14.731;HRun=0;HaplotypeScore=177.1759;InbreedingCoeff=0.6218;MQ=57.26;MQ0=13;MQRankSum=-7.148;QD=32.19;ReadPosRankSum=-2.355;VQSLOD=2.8039;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:96.20:0,96,2765	1/1:11,0:10:12.03:357,12,0	0/0:27,0:19:57.11:0,57,1557	0/0:38,0:27:62.88:0,63,1753	1/1:17,0:15:9:125,9,0	1/1:28,0:27:29.79:763,30,0	1/1:11,0:11:6.48:166,6,0	1/1:29,0:28:78.22:2117,78,0	1/1:11,0:11:9.03:198,9,0	1/1:26,0:25:66.15:1872,66,0	1/1:11,0:11:9:211,9,0	1/1:7,22:32:5.73:51,6,0	1/1:26,0:24:39.08:850,39,0	1/1:22,0:23:8.31:96,8,0	1/1:23,0:21:14.75:421,15,0	1/1:21,0:20:27.20:604,27,0	1/1:25,2:26:41.73:1106,42,0	1/1:3,7:10:5.95:113,6,0	1/1:20,0:19:51.10:1580,51,0	1/1:12,0:12:9.03:301,9,0	./.	1/1:11,0:11:6:74,6,0	1/1:13,0:13:9.01:199,9,0	1/1:3,26:30:0.47:1,0,0	1/1:16,0:16:12.01:408,12,0	0/1:22,0:21:36.90:1749,0,37	1/1:23,0:21:38.84:904,39,0	1/1:10,0:10:27.04:703,27,0
chr10	21762827	.	CT	C	13994.13	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=5.037;DP=601;FS=21.697;HRun=8;HaplotypeScore=88.2126;InbreedingCoeff=0.9956;MQ=74.75;MQ0=0;MQRankSum=-5.734;QD=25.35;ReadPosRankSum=3.011;VQSLOD=3.5413;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:60.18:0,60,724	1/1:0,8:8:21.03:203,21,0	0/0:16,0:16:41.75:0,42,421	0/0:12,0:12:23.27:0,23,313	1/1:1,24:25:65.93:605,66,0	1/1:2,27:29:66.10:637,66,0	1/1:1,9:10:27.04:261,27,0	1/1:2,46:48:99:1289,135,0	1/1:2,16:18:42.07:406,42,0	1/1:3,26:29:78.08:743,78,0	1/1:0,18:18:51.08:493,51,0	1/1:1,19:20:54.04:512,54,0	1/1:1,31:32:87.14:840,87,0	1/1:0,21:21:60.10:579,60,0	1/1:0,31:31:87.09:831,87,0	1/1:0,17:17:45.07:435,45,0	1/1:2,22:24:60.09:579,60,0	1/1:1,17:18:51.08:492,51,0	1/1:3,21:24:29.87:572,30,0	1/1:1,20:21:48.05:463,48,0	1/1:1,14:15:42.07:406,42,0	1/1:1,15:16:44.97:414,45,0	1/1:1,14:15:42.02:396,42,0	1/1:1,16:17:42.07:406,42,0	1/1:0,27:27:78.13:753,78,0	1/1:0,27:26:78.13:753,78,0	1/1:6,27:32:75.12:724,75,0	1/1:1,8:9:21.03:203,21,0
chr10	21763029	.	T	TG	16945.41	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=10.989;DP=630;FS=6.160;HRun=0;HaplotypeScore=127.9953;InbreedingCoeff=0.9990;MQ=74.32;MQ0=2;MQRankSum=-2.285;QD=34.23;ReadPosRankSum=2.847;VQSLOD=4.1557;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,99,1378	1/1:1,10:11:30:368,30,0	0/0:27,0:22:47.75:0,48,544	0/0:27,0:20:37.08:0,37,539	0/0:27,0:27:81.26:0,81,1109	1/1:0,29:29:66.22:911,66,0	1/1:1,21:22:46.04:626,46,0	1/1:3,32:35:96.20:1199,96,0	1/1:0,14:15:36.12:492,36,0	1/1:2,19:21:57.10:716,57,0	1/1:0,23:23:66.22:914,66,0	1/1:0,17:17:39.13:546,39,0	1/1:2,22:24:50.75:701,51,0	1/1:0,20:20:54.18:745,54,0	1/1:1,37:38:81.27:1110,81,0	1/1:0,17:17:42.14:577,42,0	1/1:0,22:22:60.20:823,60,0	1/1:1,10:11:30.05:387,30,0	1/1:1,25:26:75.12:914,75,0	1/1:1,19:21:53.04:692,53,0	1/1:0,8:8:24.08:329,24,0	0/0:19,0:19:57.19:0,57,796	1/1:0,17:17:48.15:644,48,0	1/1:0,11:11:33.11:449,33,0	1/1:2,28:30:71.87:936,72,0	1/1:0,29:29:87.09:1157,87,0	1/1:1,34:35:96.15:1293,96,0	1/1:1,12:13:30.10:415,30,0
chr10	21763775	.	ACACT	A	22768.55	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=6.445;DP=667;FS=15.138;HRun=0;HaplotypeScore=127.5614;InbreedingCoeff=0.9683;MQ=84.05;MQ0=0;MQRankSum=-10.617;QD=42.96;ReadPosRankSum=5.992;VQSLOD=4.3844;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,111,2934	1/1:1,10:11:24.08:465,24,0	0/0:27,0:27:78.23:0,78,1963	0/0:24,0:24:69.23:0,69,1662	0/0:23,0:23:51.18:0,51,1395	1/1:0,30:30:69.24:1336,69,0	1/1:0,22:22:48.15:930,48,0	1/1:1,25:26:75.24:1416,75,0	1/1:1,32:32:84.29:1620,84,0	1/1:1,18:19:51.17:972,51,0	1/1:0,11:11:15.05:291,15,0	1/1:1,20:21:60.21:1163,60,0	1/1:0,27:27:69.24:1337,69,0	1/1:2,32:34:84.29:1620,84,0	1/1:2,40:42:96.33:1860,96,0	1/1:1,25:26:66.23:1279,66,0	1/1:3,39:42:81.28:1570,81,0	1/1:0,23:23:54.19:1039,54,0	1/1:1,10:11:30.10:568,30,0	1/1:0,17:17:12.04:232,12,0	1/1:2,23:25:54.19:1041,54,0	0/0:24,0:24:66.22:0,66,1788	1/1:2,16:18:11.91:232,12,0	1/1:0,20:20:51.17:988,51,0	1/1:2,32:34:62.91:1218,63,0	1/1:1,14:15:39.11:719,39,0	1/1:0,18:18:36.12:697,36,0	1/1:0,5:5:9.03:174,9,0
chr10	21763879	.	A	ACC	7062.90	PASS	AB=0.861;AC=43;AF=0.768;AN=56;BaseQRankSum=-2.034;DP=611;FS=6.471;HRun=0;HaplotypeScore=149.3163;InbreedingCoeff=0.7235;MQ=64.54;MQ0=11;MQRankSum=-0.981;QD=15.19;ReadPosRankSum=4.732;VQSLOD=4.0624;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:41:74.56:0,75,604	0/1:6,0:6:9:84,0,9	0/0:35,0:21:62.98:0,63,587	0/0:26,0:14:42.02:0,42,414	0/0:10,0:21:29.76:0,30,223	1/1:18,0:17:40.67:298,41,0	1/1:29,0:29:53.69:429,54,0	1/1:24,0:24:66.60:532,67,0	1/1:20,0:20:43.57:349,44,0	1/1:17,0:17:43.32:341,43,0	1/1:11,0:10:14.73:111,15,0	1/1:20,0:20:37.95:290,38,0	1/1:27,0:27:64.37:435,64,0	1/1:25,0:25:53.92:403,54,0	1/1:29,0:29:56.37:413,56,0	1/1:17,0:17:39.37:351,39,0	0/1:26,0:26:1.78:310,0,2	1/1:16,0:15:26.10:273,26,0	1/1:14,0:14:28.26:262,28,0	1/1:15,0:15:30.34:271,30,0	1/1:35,0:35:40.80:426,41,0	0/0:18,0:23:53.74:0,54,419	1/1:13,0:13:29.80:225,30,0	1/1:29,0:29:38.90:309,39,0	1/1:16,0:16:33.60:243,34,0	1/1:1,23:25:68.43:580,68,0	0/1:6,13:21:19.06:49,0,19	1/1:2,2:12:6.02:80,6,0
chr10	21763881	.	CACACACACA	C	952.33	PASS	AB=0.799;AC=9;AF=0.161;AN=56;BaseQRankSum=8.850;DP=623;FS=3.854;HRun=0;HaplotypeScore=228.1132;InbreedingCoeff=-0.1960;MQ=62.36;MQ0=11;MQRankSum=-8.046;QD=4.79;ReadPosRankSum=0.697;VQSLOD=2.4209;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:54.16:0,54,688	0/0:7,0:7:17.39:0,17,205	0/0:33,0:19:57.12:0,57,692	0/0:26,0:14:42.13:0,42,535	0/0:21,0:21:12.03:0,12,140	0/1:14,4:18:99:165,0,118	0/0:29,1:30:46.12:0,46,224	0/0:25,0:25:70.75:0,71,472	0/1:15,3:20:81.74:82,0,193	0/1:14,2:16:90.76:91,0,154	0/0:11,0:10:14.37:0,14,84	0/1:11,7:19:94.65:212,0,95	0/1:20,4:26:99:243,0,216	0/1:19,5:25:99:131,0,197	0/1:20,0:29:99:115,0,152	0/0:18,0:19:50.04:0,50,852	0/0:29,0:29:66.80:0,67,1533	0/0:16,0:16:34.22:0,34,964	0/0:15,0:15:38.57:0,39,669	0/0:17,0:17:40.14:0,40,720	0/0:38,0:38:64.62:0,65,1377	0/0:21,0:21:27.08:0,27,332	0/0:12,1:13:28.98:0,29,178	0/1:23,6:29:16.81:17,0,110	0/1:12,4:16:37.74:38,0,117	0/0:28,0:28:76.64:0,77,1106	0/0:21,0:21:15.04:0,15,587	0/0:12,0:12:12.51:0,13,476
chr10	21764797	.	TTA	T	13097.48	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=12.370;DP=493;FS=3.393;HRun=0;HaplotypeScore=116.4400;InbreedingCoeff=0.9706;MQ=81.25;MQ0=0;MQRankSum=-5.187;QD=33.07;ReadPosRankSum=4.310;VQSLOD=6.8613;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:42.14:0,42,745	1/1:0,9:9:24.08:330,24,0	0/0:24,0:24:16.40:0,16,958	0/0:13,0:13:19.70:0,20,447	0/0:27,0:27:75.26:0,75,1324	1/1:3,25:28:69.23:948,69,0	1/1:1,14:15:39.13:536,39,0	1/1:4,28:32:84.26:1136,84,0	1/1:2,10:12:30.10:412,30,0	1/1:3,15:18:45.14:602,45,0	1/1:2,25:27:69.14:904,69,0	1/1:1,9:10:24.08:330,24,0	1/1:2,15:17:42.14:576,42,0	1/1:4,12:16:33.11:453,33,0	1/1:16,0:16:8.04:186,8,0	1/1:0,13:13:36.12:495,36,0	1/1:2,23:25:60.20:824,60,0	1/1:2,12:14:29.84:412,30,0	1/1:2,12:14:36.11:479,36,0	1/1:2,22:24:60.20:824,60,0	1/1:0,5:5:15.01:185,15,0	0/0:17,0:17:42.14:0,42,745	1/1:2,11:13:33.11:453,33,0	1/1:0,10:10:24.07:330,24,0	1/1:5,24:29:66.22:906,66,0	1/1:0,20:20:57.15:747,57,0	1/1:2,20:22:60.20:824,60,0	1/1:2,5:7:15.05:206,15,0
chr10	21764803	.	ATC	A	5263.62	PASS	AB=0.990;AC=41;AF=0.732;AN=56;BaseQRankSum=10.419;DP=477;FS=0.000;HRun=0;HaplotypeScore=142.2103;InbreedingCoeff=0.4626;MQ=81.98;MQ0=0;MQRankSum=-4.526;QD=13.74;ReadPosRankSum=8.885;VQSLOD=3.7334;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:42.14:0,42,850	1/1:9,0:9:8.43:127,8,0	0/0:23,1:24:23.63:0,24,1141	0/0:12,0:12:22.78:0,23,519	0/0:29,0:29:87.15:0,87,1585	1/1:28,0:28:2.29:334,2,0	1/1:14,0:14:37.68:213,38,0	0/1:32,0:32:14.19:396,0,14	1/1:11,0:11:7.12:144,7,0	0/1:17,0:17:10.14:145,0,10	1/1:26,0:26:28.17:360,28,0	1/1:9,0:9:23.39:144,23,0	0/1:19,0:20:16.98:216,0,17	1/1:12,0:12:32.21:210,32,0	1/1:1,14:15:30.10:458,30,0	1/1:16,0:16:12.99:183,13,0	1/1:23,0:23:58.53:363,59,0	1/1:12,0:12:28.96:163,29,0	0/1:14,0:14:10.62:123,0,11	1/1:23,0:23:29.63:339,30,0	0/1:6,0:6:9.47:52,0,9	0/0:15,0:15:45.15:0,45,870	1/1:12,0:12:10.26:177,10,0	1/1:11,0:11:1.25:106,1,0	1/1:26,0:26:5.37:330,5,0	1/1:21,0:21:23.04:249,23,0	1/1:21,0:21:36.53:335,37,0	1/1:5,0:5:14.73:97,15,0
chr10	21765649	.	G	GC	8974.90	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=13.213;DP=676;FS=14.904;HRun=1;HaplotypeScore=170.4337;InbreedingCoeff=0.9664;MQ=82.60;MQ0=0;MQRankSum=-3.760;QD=16.17;ReadPosRankSum=2.574;VQSLOD=3.6271;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:51.17:0,51,662	1/1:14,0:14:40.24:212,40,0	0/0:28,0:28:71.99:0,72,936	0/0:15,0:15:4.55:0,5,396	0/0:34,0:34:99:0,99,1285	1/1:22,0:22:59.76:302,60,0	1/1:10,0:10:20.29:112,20,0	1/1:40,2:42:99:998,119,0	1/1:24,0:24:67.93:390,68,0	1/1:27,2:29:66.17:577,66,0	1/1:33,0:33:85.19:489,85,0	1/1:18,0:18:51.17:291,51,0	1/1:30,1:31:71.02:452,71,0	1/1:19,0:19:47.07:254,47,0	1/1:18,0:18:45.83:246,46,0	1/1:33,0:33:92.31:511,92,0	1/1:27,0:27:64.66:398,65,0	1/1:20,0:20:33.10:159,33,0	1/1:14,0:14:35.09:270,35,0	1/1:26,0:26:69.57:381,70,0	1/1:14,0:14:37.29:195,37,0	0/0:26,0:26:75.21:0,75,943	1/1:32,0:32:84.71:528,85,0	1/1:20,0:20:33.66:310,34,0	1/1:30,0:30:83.30:461,83,0	1/1:33,0:33:96.08:676,96,0	1/1:30,1:31:80.43:489,80,0	1/1:15,0:15:40.21:273,40,0
chr10	21765891	.	TG	T	14780.08	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=4.197;DP=475;FS=2.163;HRun=2;HaplotypeScore=47.2970;InbreedingCoeff=0.9553;MQ=77.88;MQ0=0;MQRankSum=-4.410;QD=36.68;ReadPosRankSum=1.160;VQSLOD=5.1937;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:60.20:0,60,898	1/1:0,14:14:39.13:506,39,0	0/0:6,0:6:18.05:0,18,239	0/0:14,0:14:41.99:0,42,567	0/0:27,0:27:81.27:0,81,1201	1/1:0,23:23:69.22:896,69,0	1/1:0,14:14:42.14:545,42,0	1/1:0,20:20:60.18:765,60,0	1/1:0,15:15:42.14:545,42,0	1/1:0,26:26:78.24:998,78,0	1/1:0,24:24:66.21:857,66,0	1/1:1,13:14:39.13:506,39,0	1/1:0,8:8:24.08:312,24,0	1/1:0,16:16:48.16:622,48,0	1/1:0,21:21:60.20:779,60,0	1/1:0,22:22:60.20:779,60,0	1/1:1,31:32:90.29:1168,90,0	1/1:1,7:8:3.59:180,4,0	1/1:0,9:9:27.07:325,27,0	1/1:1,25:26:72.23:935,72,0	1/1:0,9:9:27.09:351,27,0	0/0:5,0:5:15.05:0,15,224	1/1:0,6:6:18.06:234,18,0	1/1:0,12:12:33.11:428,33,0	1/1:1,13:14:36.12:467,36,0	1/1:0,30:30:90.27:1141,90,0	1/1:0,28:28:75.24:974,75,0	1/1:0,12:12:36.12:467,36,0
chr10	21766216	.	G	GT	986.39	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-6.252;DP=561;FS=9.918;HRun=8;HaplotypeScore=52.3388;InbreedingCoeff=0.9960;MQ=77.98;MQ0=0;MQRankSum=-0.980;QD=28.18;ReadPosRankSum=1.283;VQSLOD=3.7762;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:63.03:0,63,576	0/0:11,0:11:27.01:0,27,247	0/0:16,0:16:29.82:0,30,245	0/0:21,0:22:29.45:0,29,323	1/1:2,22:24:66.20:762,66,0	0/0:22,0:22:63:0,63,567	0/0:9,0:9:24.01:0,24,220	0/0:36,0:36:83.99:0,84,755	0/0:25,0:25:66.01:0,66,599	0/0:23,0:23:63.02:0,63,574	0/0:18,0:18:45.02:0,45,409	0/0:12,0:12:33.02:0,33,302	0/0:28,0:28:69.01:0,69,627	0/0:31,0:31:81.03:0,81,741	0/0:22,0:22:63.02:0,63,572	0/0:13,0:13:39.02:0,39,357	0/0:33,0:33:87.01:0,87,788	0/0:16,0:16:45:0,45,408	0/0:22,0:22:53.86:0,54,480	0/0:22,0:22:60.49:0,60,546	0/0:11,0:11:33.02:0,33,302	1/1:1,10:11:30.09:346,30,0	0/0:12,0:12:33.01:0,33,302	0/0:11,0:11:24.01:0,24,220	0/0:14,0:14:36.02:0,36,330	0/0:27,0:27:66.02:0,66,601	0/0:32,0:32:77.99:0,78,703	0/0:15,0:15:44.97:0,45,400
chr10	21772629	.	TACACACACACACACACACACACACAC	T	5157.01	PASS	AB=0.773;AC=13;AF=0.232;AN=56;BaseQRankSum=6.668;DP=471;FS=0.779;HRun=0;HaplotypeScore=253.8156;InbreedingCoeff=0.7217;MQ=61.07;MQ0=9;MQRankSum=-4.418;QD=56.67;ReadPosRankSum=3.108;VQSLOD=3.3561;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:23:32.90:0,33,3287	1/1:6,0:6:2.99:23,3,0	0/0:27,0:12:9.03:0,9,335	0/0:19,0:10:10.85:0,11,428	0/0:19,0:20:36.12:0,36,3878	0/0:13,0:17:9.02:0,9,419	0/0:8,0:11:12.03:0,12,836	0/0:18,0:18:42.14:0,42,2500	0/0:5,0:10:3.01:0,3,340	0/0:11,0:15:36.12:0,36,3546	0/0:15,0:17:15.05:0,15,1020	0/0:10,0:15:18.06:0,18,1519	0/0:18,0:18:33.51:0,34,2457	0/0:15,0:21:23.13:0,23,1763	0/0:19,0:24:24.08:0,24,2034	0/1:12,5:17:99:999,0,320	1/1:6,6:12:15.05:1017,15,0	1/1:3,2:5:6.02:407,6,0	1/1:12,5:18:18.04:883,18,0	1/1:11,9:21:27.05:1625,27,0	1/1:8,4:12:3.48:204,3,0	0/0:14,0:18:20.65:0,21,2001	0/0:12,0:12:14.83:0,15,643	0/0:10,0:15:12.04:0,12,1265	0/0:16,0:23:20.65:0,21,2088	0/0:20,0:19:45.15:0,45,4294	0/0:12,0:26:39.99:0,40,3874	0/0:5,0:10:15.01:0,15,811
chr10	21773869	.	A	AAAC	699.71	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-3.665;DP=625;FS=14.295;HRun=0;HaplotypeScore=90.2283;InbreedingCoeff=0.9088;MQ=64.78;MQ0=10;MQRankSum=1.360;QD=38.87;ReadPosRankSum=1.893;VQSLOD=3.6257;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:66.01:0,66,944	0/0:11,0:11:30.10:0,30,470	0/0:35,0:16:8.21:0,8,490	0/0:43,0:24:36.64:0,37,486	0/0:24,0:24:72.24:0,72,1130	0/0:27,0:26:72.23:0,72,1125	0/0:18,0:18:43.66:0,44,603	0/0:27,0:27:67.44:0,67,983	0/0:14,0:14:42.12:0,42,623	0/0:19,0:19:48.16:0,48,749	0/0:21,0:21:54.16:0,54,819	0/0:16,0:16:39.12:0,39,605	0/0:24,0:24:66.22:0,66,1050	0/0:23,0:23:60.18:0,60,915	1/1:1,16:18:36.12:794,36,0	0/0:13,0:13:39.12:0,39,603	0/0:33,0:33:84.22:0,84,1264	0/0:20,0:20:57.12:0,57,857	0/0:17,0:15:42.13:0,42,644	0/0:27,0:27:81.24:0,81,1264	0/0:16,0:16:48.15:0,48,730	0/0:22,0:22:60.20:0,60,941	0/0:24,0:24:69.22:0,69,1082	0/0:18,0:18:51.16:0,51,779	0/0:20,0:20:60.20:0,60,955	0/0:36,0:36:99:0,102,1582	0/0:30,0:30:90.30:0,90,1405	0/0:4,0:4:12.04:0,12,193
chr10	21779210	.	CTCTGTCTGTCTG	C	8793.59	PASS	AB=0.891;AC=40;AF=0.769;AN=52;BaseQRankSum=7.127;DP=669;FS=0.000;HRun=0;HaplotypeScore=264.8720;InbreedingCoeff=0.5416;MQ=68.45;MQ0=7;MQRankSum=0.712;QD=16.65;ReadPosRankSum=4.093;VQSLOD=3.3430;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:72.20:0,72,2185	1/1:15,0:15:17.82:156,18,0	0/0:28,0:19:15.05:0,15,290	0/0:23,0:16:12.03:0,12,222	1/1:6,10:16:5.90:79,6,0	1/1:28,0:28:29.97:518,30,0	1/1:14,0:13:15.04:295,15,0	1/1:15,8:23:19.17:230,19,0	1/1:24,0:23:33.11:720,33,0	1/1:8,18:25:45.14:932,45,0	0/1:4,14:18:0:0,0,0	1/1:23,0:23:30.07:529,30,0	1/1:19,0:19:18.06:339,18,0	1/1:31,0:30:14.93:280,15,0	1/1:23,0:23:14.63:299,15,0	1/1:30,0:30:8.40:220,8,0	0/1:37,0:37:2.14:355,0,2	0/1:32,0:32:44.41:305,0,44	0/1:23,0:21:27.71:69,0,28	0/0:4,0:20:0.47:0,0,1	1/1:35,0:33:7.82:242,8,0	./.	./.	1/1:23,0:23:12.04:271,12,0	1/1:23,0:23:33.11:695,33,0	1/1:21,0:21:36.11:704,36,0	1/1:28,0:28:60.18:1083,60,0	1/1:16,0:16:30.09:472,30,0
chr10	21779354	.	GC	G	4258.87	PASS	AB=0.725;AC=40;AF=0.800;AN=50;BaseQRankSum=-1.406;DP=359;FS=6.790;HRun=3;HaplotypeScore=71.9123;InbreedingCoeff=-0.2835;MQ=32.60;MQ0=123;MQRankSum=1.838;QD=12.10;ReadPosRankSum=2.343;VQSLOD=3.0831;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:5,6:8:21.07:106,0,21	1/1:3,3:3:3.01:37,3,0	0/1:7,2:5:32.68:66,0,33	0/1:13,2:3:25.85:31,0,26	./.	0/1:4,5:6:16.66:107,0,17	1/1:18,15:16:30.09:372,30,0	1/1:4,6:7:18.06:223,18,0	1/1:1,13:13:36.11:434,36,0	0/1:9,4:9:5.13:110,0,5	1/1:3,1:3:3.01:37,3,0	0/1:9,9:14:36.15:234,0,36	1/1:7,7:8:21.07:260,21,0	1/1:3,10:12:22.48:261,22,0	1/1:3,7:7:21.07:259,21,0	0/1:2,8:9:13.27:204,0,13	1/1:8,16:17:36.11:446,36,0	0/1:11,12:16:76.57:196,0,77	1/1:8,2:3:6.02:74,6,0	./.	0/1:24,6:7:31.15:31,0,34	./.	1/1:5,4:6:4.37:40,4,0	1/1:21,14:21:17.25:221,17,0	1/1:5,5:7:12.04:148,12,0	1/1:5,4:5:12.04:149,12,0	1/1:1,5:5:12.04:148,12,0	0/1:5,2:4:27.52:65,0,28
chr10	21779428	.	CCTATCTAT	C	761.41	PASS	AB=0.970;AC=11;AF=0.229;AN=48;BaseQRankSum=-0.876;DP=398;FS=2.803;HRun=0;HaplotypeScore=125.0359;InbreedingCoeff=0.4161;MQ=30.61;MQ0=56;MQRankSum=-4.114;QD=7.93;ReadPosRankSum=1.493;VQSLOD=2.5577;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:13:15.05:0,15,466	1/1:1,0:1:3.01:58,3,0	./.	./.	0/0:7,0:7:2.74:0,3,97	./.	0/0:32,0:22:0.47:0,0,1	./.	0/0:16,0:15:2.21:0,2,74	0/0:19,0:18:27.04:0,27,659	0/1:8,0:7:0.08:0,0,0	0/0:17,0:13:3.01:0,3,99	0/0:23,0:20:3.48:0,3,99	0/0:28,0:23:15.05:0,15,491	1/1:13,5:18:21.04:417,21,0	1/1:13,3:16:12.04:278,12,0	0/0:33,0:24:13.11:0,13,51	1/1:14,0:6:3.01:72,3,0	0/1:9,1:4:63.41:63,0,101	0/0:2,1:3:4.07:0,4,13	0/0:14,0:8:5.45:0,5,15	0/0:7,0:6:8.73:0,9,272	0/0:13,0:9:6.02:0,6,196	0/1:28,0:22:0.34:0,0,0	0/0:15,0:14:7.51:0,8,292	0/0:12,0:9:18.06:0,18,372	0/0:11,0:11:3.01:0,3,77	0/0:4,0:2:2.97:0,3,20
chr10	21781635	.	T	TA	2309.76	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=11.783;DP=688;FS=1.128;HRun=0;HaplotypeScore=81.0527;InbreedingCoeff=0.9974;MQ=93.99;MQ0=0;MQRankSum=-2.301;QD=35.00;ReadPosRankSum=2.084;VQSLOD=3.4488;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:81.21:0,81,1091	0/0:12,0:12:36.08:0,36,467	0/0:28,0:28:74.74:0,75,1011	0/0:33,0:33:84.12:0,84,1083	1/1:1,38:39:96.15:1468,96,0	0/0:25,0:25:75.23:0,75,1030	0/0:11,0:11:33.10:0,33,446	0/0:31,0:31:93.30:0,93,1286	0/0:10,0:10:30.10:0,30,420	0/0:29,0:29:81.27:0,81,1133	0/0:20,0:20:57.19:0,57,796	0/0:21,0:21:60.20:0,60,839	0/0:28,0:28:84.11:0,84,1146	0/0:29,0:29:87.29:0,87,1216	0/0:28,0:28:84.28:0,84,1174	0/0:19,0:19:57.19:0,57,797	0/0:18,0:18:54.18:0,54,755	0/0:9,0:9:21.07:0,21,292	0/0:29,0:29:87.28:0,87,1199	0/0:29,0:29:87.28:0,87,1199	0/0:25,0:25:72.24:0,72,1007	1/1:1,26:27:68.59:964,69,0	0/0:33,0:33:99:0,99,1351	0/0:14,0:14:39.13:0,39,544	0/0:20,0:20:60.19:0,60,823	0/0:29,0:29:87.28:0,87,1202	0/0:36,0:33:99:0,108,1453	0/0:28,0:28:81.21:0,81,1062
chr10	21782662	.	CA	C	14185.65	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=17.968;DP=576;FS=10.572;HRun=2;HaplotypeScore=177.1351;InbreedingCoeff=0.9974;MQ=70.45;MQ0=0;MQRankSum=-7.156;QD=34.26;ReadPosRankSum=3.035;VQSLOD=2.8422;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,126,1842	1/1:0,9:9:27.09:350,27,0	0/0:13,0:13:39.11:0,39,542	0/0:16,0:16:45.15:0,45,659	0/0:35,0:35:99:0,102,1472	1/1:0,13:13:39.13:505,39,0	1/1:0,13:13:30.10:384,30,0	1/1:5,21:26:63.19:791,63,0	1/1:1,20:21:57.18:739,57,0	1/1:2,23:25:69.20:878,69,0	1/1:1,23:24:63.20:811,63,0	1/1:1,18:19:51.17:660,51,0	1/1:0,11:11:33.10:417,33,0	1/1:1,23:24:66.21:854,66,0	0/0:28,0:28:84.28:0,84,1258	1/1:0,22:22:66.21:843,66,0	1/1:1,12:13:30.10:388,30,0	1/1:0,10:10:24.07:311,24,0	1/1:3,11:14:33.11:426,33,0	1/1:2,20:22:60.09:754,60,0	1/1:0,13:13:36.12:466,36,0	0/0:28,0:28:84.28:0,84,1254	1/1:4,19:23:57.19:738,57,0	1/1:1,10:10:18.06:233,18,0	1/1:0,27:27:78.25:1010,78,0	1/1:1,21:22:63.19:802,63,0	1/1:3,33:36:93.30:1204,93,0	1/1:0,16:16:48.16:622,48,0
chr10	21782732	.	T	TAAA	10116.78	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-3.525;DP=524;FS=2.409;HRun=13;HaplotypeScore=138.8082;InbreedingCoeff=0.9248;MQ=67.11;MQ0=0;MQRankSum=-5.097;QD=24.98;ReadPosRankSum=-4.557;VQSLOD=2.1047;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:22:29.25:0,29,176	1/1:2,0:3:2.99:23,3,0	0/0:12,0:10:8.36:0,8,45	0/0:13,0:11:10.86:0,11,103	0/0:20,0:23:39.87:0,40,411	1/1:10,10:22:48.07:726,48,0	1/1:2,7:15:23.99:310,24,0	1/1:10,7:19:27.90:380,28,0	1/1:12,5:18:38.60:547,39,0	1/1:17,3:22:48.11:636,48,0	1/1:11,4:18:42.12:608,42,0	1/1:15,4:22:51.13:777,51,0	1/1:17,8:29:54.11:782,54,0	1/1:17,5:27:58.34:768,58,0	0/0:6,0:24:55.78:0,56,334	1/1:10,2:23:48.64:444,49,0	1/1:6,0:14:28.66:244,29,0	1/1:3,0:8:16.18:115,16,0	1/1:7,1:14:25.21:268,25,0	1/1:12,1:21:8.41:310,8,0	1/1:4,0:9:20.87:155,21,0	0/0:22,0:23:33.45:0,33,369	1/1:12,8:20:42.09:644,42,0	1/1:6,2:8:18.04:258,18,0	1/1:11,4:17:30.94:417,31,0	1/1:18,3:24:35.06:413,35,0	1/1:20,7:29:49.65:706,50,0	1/1:12,9:21:36.11:587,36,0
chr10	21783087	.	T	TTCTTTC	771.68	PASS	AB=0.992;AC=20;AF=0.357;AN=56;BaseQRankSum=10.041;DP=562;FS=0.572;HRun=0;HaplotypeScore=172.8884;InbreedingCoeff=-0.4476;MQ=71.91;MQ0=7;MQRankSum=-5.127;QD=1.98;ReadPosRankSum=-1.267;VQSLOD=2.6749;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:15:27.02:0,27,417	0/0:6,0:6:11.99:0,12,100	0/0:37,0:25:50.48:0,50,623	0/0:38,0:26:27.33:0,27,364	0/1:27,0:27:17.52:18,0,197	0/1:29,0:30:6.14:6,0,198	0/1:21,0:21:79.83:80,0,123	0/1:36,0:35:50.01:50,0,439	0/1:13,0:13:55.70:56,0,101	0/1:23,0:23:51.79:52,0,255	0/0:18,0:18:1.96:0,2,166	0/1:11,0:11:67.32:86,0,67	0/1:15,0:14:18.89:19,0,98	0/0:18,0:17:11.37:0,11,84	1/1:6,5:13:3.01:91,3,0	0/1:20,0:21:46.77:47,0,148	0/1:12,0:12:89.47:89,0,95	0/0:4,0:2:2.98:0,3,21	0/1:30,0:27:83.68:84,0,230	0/1:28,0:28:25.95:26,0,151	0/1:16,0:16:2.45:2,0,80	0/0:23,0:23:26.34:0,26,206	0/1:24,0:23:42.17:42,0,147	0/1:13,0:13:37.25:37,0,54	0/0:13,0:13:20.92:0,21,168	0/1:29,0:28:57.08:57,0,341	0/1:17,0:17:69.20:69,0,196	0/1:9,0:9:15.71:16,0,85
chr10	21783130	.	A	ATT	155.56	PASS	AB=0.970;AC=16;AF=0.320;AN=50;BaseQRankSum=4.816;DP=219;FS=10.670;HRun=0;HaplotypeScore=109.2189;InbreedingCoeff=0.0872;MQ=35.92;MQ0=22;MQRankSum=-3.513;QD=1.64;ReadPosRankSum=-1.421;VQSLOD=1.4482;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:20:36.10:0,36,537	0/0:3,0:3:4.07:0,4,12	0/0:11,0:2:3.01:0,3,38	0/0:12,0:1:3.01:0,3,42	0/0:6,0:6:0:0,0,0	1/1:6,6:12:2.92:61,3,0	./.	./.	0/1:4,1:4:0.06:0,0,0	0/0:4,0:4:7.59:0,8,40	1/1:5,1:6:2.30:8,2,0	1/1:3,0:3:4:22,4,0	0/1:8,0:8:27.70:31,0,28	0/1:6,0:5:3.07:31,0,3	0/0:15,0:14:10.96:0,11,249	0/0:9,0:9:1.67:0,2,6	0/0:5,0:4:0.07:0,0,41	0/0:2,0:1:2.96:0,3,19	0/0:15,0:9:23.69:0,24,252	0/1:17,0:17:4.26:4,0,30	0/0:11,0:9:5.03:0,5,33	./.	0/1:11,1:12:20.43:48,0,20	0/0:3,0:3:0:0,0,0	1/1:4,0:4:3.01:38,3,0	0/1:10,0:9:3.95:4,0,94	0/1:8,0:8:25.84:26,0,74	0/1:4,0:3:6.19:6,0,12
chr10	21783147	.	CAT	C	796.51	PASS	AB=0.890;AC=25;AF=0.446;AN=56;BaseQRankSum=5.669;DP=295;FS=3.345;HRun=0;HaplotypeScore=119.1909;InbreedingCoeff=0.0998;MQ=49.79;MQ0=21;MQRankSum=-2.688;QD=4.13;ReadPosRankSum=2.270;VQSLOD=2.8838;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:50.74:0,51,573	1/1:3,0:3:5.03:30,5,0	0/1:22,0:7:7.99:8,0,33	0/1:31,0:11:7.94:8,0,68	0/0:14,0:14:23.48:0,23,169	1/1:13,0:13:1.67:49,2,0	0/0:2,0:2:0.44:0,0,1	0/0:15,0:2:5.96:0,6,43	0/1:5,0:4:7.19:13,0,7	1/1:4,0:5:5.80:56,6,0	0/1:5,1:6:9.15:9,0,11	1/1:3,0:3:3.99:15,4,0	0/1:3,4:8:5.48:64,0,5	0/1:6,0:5:1.90:46,0,2	0/0:17,1:17:21.56:0,22,168	1/1:10,0:10:2.88:65,3,0	0/0:2,0:2:5.80:0,6,32	0/0:2,0:1:0.47:0,0,1	0/0:16,0:12:15.98:0,16,133	0/1:21,0:21:36.06:81,0,36	0/1:13,0:11:15.91:36,0,16	0/0:8,0:8:20.70:0,21,151	0/1:10,1:13:8.42:40,0,8	0/0:5,0:5:0:0,0,0	1/1:5,1:7:8.83:61,9,0	0/1:6,6:10:40.74:160,0,41	1/1:5,5:9:18.73:202,19,0	0/1:4,1:3:13.09:13,0,26
chr10	21783151	.	CAT	C	891.37	PASS	AB=0.943;AC=22;AF=0.393;AN=56;BaseQRankSum=6.611;DP=311;FS=5.942;HRun=0;HaplotypeScore=121.2680;InbreedingCoeff=0.0855;MQ=54.46;MQ0=19;MQRankSum=-4.400;QD=6.32;ReadPosRankSum=1.214;VQSLOD=3.0905;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:55.69:0,56,1010	1/1:3,0:3:5.99:49,6,0	0/0:28,0:11:10.56:0,11,299	0/0:35,0:17:18.33:0,18,422	0/0:14,0:14:29.73:0,30,512	1/1:14,0:14:7.66:91,8,0	0/0:2,0:2:0.44:0,0,1	0/0:14,0:2:6.02:0,6,83	0/1:5,0:4:7.59:17,0,8	0/1:5,0:5:21.24:72,0,21	0/1:5,1:6:8.16:8,0,12	1/1:3,0:3:3.38:11,3,0	0/1:8,1:9:27.44:37,0,27	1/1:6,0:6:0.53:69,1,0	0/0:16,1:16:38.65:0,39,691	1/1:10,0:10:3.98:67,4,0	0/0:2,0:2:4.96:0,5,24	0/0:2,0:1:0.47:0,0,1	0/0:16,0:12:7.91:0,8,199	0/1:19,1:20:38.07:79,0,38	0/1:13,0:11:17.80:36,0,18	0/0:10,0:10:23.91:0,24,415	0/1:11,2:13:9.74:40,0,10	0/0:6,0:6:0:0,0,0	0/1:7,0:7:17.16:39,0,17	0/1:10,2:10:26.17:174,0,26	1/1:10,0:9:23.01:249,23,0	0/1:5,0:3:14.09:14,0,27
chr10	21783153	.	T	TTCTCTCTCTCTC	13328.70	PASS	AB=1.000;AC=43;AF=0.796;AN=54;BaseQRankSum=4.815;DP=445;FS=2.566;HRun=0;HaplotypeScore=212.1270;InbreedingCoeff=0.7177;MQ=55.20;MQ0=18;MQRankSum=-5.814;QD=38.19;ReadPosRankSum=2.245;VQSLOD=4.2756;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:21:45.30:0,45,1351	1/1:2,2:5:9.03:422,9,0	0/0:34,0:16:27.74:0,28,530	0/1:40,0:19:18.53:19,0,517	0/0:14,0:14:27.05:0,27,641	1/1:24,0:24:32.63:935,33,0	1/1:8,0:7:5.68:224,6,0	1/1:21,0:8:24.08:845,24,0	1/1:5,0:4:3.01:90,3,0	1/1:17,0:17:39.13:1433,39,0	1/1:14,0:14:8.93:232,9,0	1/1:10,0:10:15.05:454,15,0	1/1:17,0:17:21.36:771,21,0	1/1:14,0:14:11.94:277,12,0	0/0:16,0:15:33.11:0,33,1001	1/1:6,9:16:17.35:938,17,0	1/1:1,1:3:3.01:177,3,0	./.	1/1:13,5:16:33.11:1165,33,0	1/1:12,13:26:14.80:718,15,0	1/1:5,8:13:8.67:419,9,0	0/0:10,0:10:21.06:0,21,502	1/1:22,0:22:13.17:508,13,0	1/1:9,0:9:3.48:104,3,0	1/1:19,0:19:24.07:805,24,0	1/1:16,0:14:33.10:973,33,0	1/1:18,0:17:42.13:1185,42,0	1/1:9,0:7:18.05:634,18,0
chr10	21785322	.	CA	C	9403.86	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=10.547;DP=505;FS=6.625;HRun=8;HaplotypeScore=78.5084;InbreedingCoeff=0.9847;MQ=67.77;MQ0=0;MQRankSum=-2.912;QD=25.28;ReadPosRankSum=1.132;VQSLOD=5.5975;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,108,1279	1/1:0,3:3:9.01:87,9,0	0/0:21,0:20:36.85:0,37,372	0/0:16,0:15:42.03:0,42,448	0/0:17,0:17:48.15:0,48,580	1/1:3,11:14:33.05:319,33,0	1/1:1,16:17:39.06:377,39,0	1/1:4,17:21:48.06:458,48,0	1/1:2,15:17:44.93:425,45,0	1/1:4,27:31:81.12:782,81,0	1/1:1,11:12:27.04:261,27,0	1/1:0,16:16:42.07:405,42,0	1/1:1,9:10:21.03:203,21,0	1/1:0,22:22:60.10:579,60,0	0/0:29,0:29:81.25:0,81,979	1/1:0,14:14:39.06:376,39,0	1/1:0,26:26:69.11:666,69,0	1/1:0,15:15:42.07:406,42,0	1/1:2,25:27:75.03:702,75,0	1/1:0,8:8:21.03:203,21,0	1/1:0,9:9:27.04:261,27,0	0/0:10,0:10:30.09:0,30,362	1/1:0,8:8:21.03:203,21,0	1/1:2,16:18:39.06:377,39,0	1/1:1,8:9:24.04:232,24,0	1/1:0,30:30:90.15:869,90,0	1/1:1,31:32:90.14:869,90,0	1/1:1,12:13:36.06:347,36,0
chr10	21785515	.	T	TTGACAACA	45223.71	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-10.501;DP=632;FS=8.317;HRun=0;HaplotypeScore=136.5624;InbreedingCoeff=0.9889;MQ=87.28;MQ0=3;MQRankSum=-17.667;QD=103.72;ReadPosRankSum=3.162;VQSLOD=5.6500;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,129,3613	1/1:2,8:11:33.11:1388,33,0	0/0:38,0:38:99:0,108,3061	0/0:30,0:29:87.24:0,87,2287	0/0:26,0:26:78.27:0,78,2362	1/1:2,11:16:36.12:1619,36,0	1/1:8,15:27:63.22:2803,63,0	1/1:10,11:26:69.21:2634,69,0	1/1:2,18:22:57.20:2528,57,0	1/1:5,9:18:51.14:1899,51,0	1/1:2,10:11:33.11:1464,33,0	1/1:2,18:23:57.06:2593,57,0	1/1:6,15:26:60.21:2591,60,0	1/1:2,22:30:75.26:3355,75,0	0/0:38,0:38:99:0,111,3279	1/1:2,22:26:72.25:3289,72,0	1/1:4,13:22:33.05:1521,33,0	1/1:3,5:9:24.08:1008,24,0	1/1:1,10:16:48.11:1710,48,0	1/1:0,5:8:20.99:727,21,0	1/1:0,10:19:27.09:1113,27,0	0/0:19,0:19:54.19:0,54,1604	1/1:3,8:14:33.11:1407,33,0	1/1:8,9:20:33.11:1447,33,0	1/1:3,5:11:12.04:553,12,0	1/1:7,23:35:99:4263,105,0	1/1:3,33:37:99:4619,102,0	1/1:4,3:6:15.05:693,15,0
chr10	21786171	.	A	AT	2297.93	PASS	AC=30;AF=0.789;AN=38;BaseQRankSum=-1.751;DP=397;FS=2.601;HRun=9;HaplotypeScore=41.2504;InbreedingCoeff=0.6953;MQ=23.99;MQ0=190;MQRankSum=0.661;QD=9.57;ReadPosRankSum=0.358;VQSLOD=1.2494;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:6:15:0,15,130	1/1:2,8:8:12.03:133,12,0	./.	./.	0/0:25,0:26:26.98:0,27,234	1/1:5,18:9:15.04:166,15,0	1/1:2,6:1:3.01:33,3,0	./.	1/1:4,8:3:6.02:66,6,0	1/1:7,17:21:51:544,51,0	1/1:4,22:21:15.04:163,15,0	1/1:4,10:5:6.02:66,6,0	1/1:1,12:5:3.01:33,3,0	1/1:1,8:3:3.01:32,3,0	0/0:14,0:3:6:0,6,52	./.	./.	./.	./.	1/1:4,23:25:22.09:471,22,0	./.	0/0:19,0:18:23.99:0,24,208	1/1:2,22:19:18.05:199,18,0	1/1:1,6:3:6.02:66,6,0	1/1:2,17:15:24.06:265,24,0	1/1:1,10:3:9.02:99,9,0	1/1:2,9:5:9.02:99,9,0	./.
chr10	21786585	.	AATAGATAG	A	660.27	PASS	AB=1.000;AC=8;AF=0.167;AN=48;BaseQRankSum=-0.664;DP=580;FS=0.906;HRun=0;HaplotypeScore=147.7232;InbreedingCoeff=0.4026;MQ=65.64;MQ0=24;MQRankSum=0.146;QD=6.23;ReadPosRankSum=-0.629;VQSLOD=2.2752;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:20.97:0,21,380	0/0:9,0:9:9.03:0,9,155	./.	./.	./.	0/0:31,0:30:63.15:0,63,992	0/0:27,0:25:15.05:0,15,219	0/0:31,0:23:0:0,0,0	0/0:18,0:16:6.02:0,6,99	0/0:30,0:28:30.10:0,30,577	0/0:30,0:30:24.08:0,24,354	0/0:12,0:12:11.84:0,12,210	0/0:24,0:24:27.95:0,28,402	0/0:21,0:21:5.12:0,5,207	1/1:19,0:18:2.76:28,3,0	0/0:16,0:15:14.54:0,15,178	0/0:14,0:13:10.98:0,11,155	0/1:17,0:16:13.86:315,0,14	0/0:17,0:17:6.02:0,6,106	0/1:36,0:35:30.87:31,0,69	0/0:16,0:15:9.03:0,9,196	0/0:14,0:14:3.01:0,3,50	0/0:29,0:29:21.03:0,21,272	0/0:5,0:6:3.01:0,3,44	0/0:22,0:22:11.93:0,12,167	1/1:28,0:27:24.03:340,24,0	./.	1/1:6,0:6:3.01:73,3,0
chr10	21786626	.	ATAGATAGATAGATAGATAGATAGGTAGGTAGG	A	225.11	PASS	AC=4;AF=0.077;AN=52;BaseQRankSum=1.423;DP=547;FS=0.000;HRun=0;HaplotypeScore=352.7913;InbreedingCoeff=0.8223;MQ=43.39;MQ0=57;MQRankSum=0.752;QD=6.62;ReadPosRankSum=-2.752;VQSLOD=0.7572;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:60.78:0,61,2253	0/0:11,0:10:26.56:0,27,692	./.	./.	1/1:1,23:24:6.02:78,6,0	0/0:33,0:31:80.96:0,81,2612	0/0:24,0:18:26.54:0,27,486	0/0:41,0:25:59.86:0,60,718	0/0:15,0:13:21:0,21,456	0/0:31,0:28:25.36:0,25,1712	0/0:22,0:21:27.56:0,28,950	0/0:16,0:15:28.71:0,29,726	0/0:25,0:24:23.16:0,23,1578	0/0:17,0:16:36.57:0,37,1330	0/0:14,0:13:21.15:0,21,602	0/0:16,0:12:34.93:0,35,1281	0/0:14,0:10:27.09:0,27,1040	0/0:14,0:13:33.10:0,33,1423	0/0:15,0:10:24.34:0,24,1062	0/0:37,0:32:72.56:0,73,1922	0/0:12,0:9:18:0,18,746	1/1:10,0:10:14.97:254,15,0	0/0:33,0:29:37.05:0,37,876	0/0:5,0:5:3.01:0,3,72	0/0:25,0:25:48.95:0,49,1128	0/0:30,0:29:78.26:0,78,2266	0/0:25,0:20:18.49:0,18,352	0/0:5,0:4:12.04:0,12,320
chr10	21786662	.	GTAGGTAGGTAGATAGATAGATAGATAGATACATACA	G	1641.62	PASS	AB=1.000;AC=16;AF=0.333;AN=48;BaseQRankSum=4.493;DP=476;FS=2.850;HRun=0;HaplotypeScore=261.6021;InbreedingCoeff=0.2917;MQ=36.19;MQ0=60;MQRankSum=4.466;QD=7.39;ReadPosRankSum=4.854;VQSLOD=2.2220;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:52.11:0,52,1811	0/0:9,0:8:18.07:0,18,196	0/0:16,0:4:12.03:0,12,141	0/0:10,0:2:6.02:0,6,106	./.	0/0:17,0:16:14.31:0,14,102	1/1:21,0:17:0.45:92,0,0	0/1:44,0:30:99:335,0,284	0/0:11,0:10:6.02:0,6,28	1/1:6,19:23:37.30:690,37,0	0/0:4,10:13:2.94:0,3,18	0/1:10,0:9:7.99:38,0,8	1/1:15,0:14:17.05:279,17,0	1/1:10,0:9:9.09:144,9,0	0/1:24,0:17:22.02:22,0,182	0/0:15,0:11:14.15:0,14,305	0/0:12,0:8:15:0,15,179	0/0:11,0:10:10.87:0,11,117	0/0:14,0:12:29.71:0,30,592	0/0:27,0:21:25.21:0,25,216	0/0:8,0:5:6.02:0,6,77	./.	./.	./.	0/1:23,0:23:18.30:61,0,18	0/1:21,0:20:54.21:54,0,222	1/1:22,0:17:10.01:64,10,0	0/1:7,0:6:18.12:24,0,18
chr10	21786689	.	GATACATAC	G	3018.80	PASS	AB=0.969;AC=36;AF=0.692;AN=52;BaseQRankSum=3.461;DP=444;FS=1.658;HRun=0;HaplotypeScore=155.0895;InbreedingCoeff=0.2141;MQ=35.86;MQ0=50;MQRankSum=-4.348;QD=9.55;ReadPosRankSum=-3.050;VQSLOD=1.9716;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:28:54.62:55,0,686	0/1:9,0:9:26.99:27,0,90	0/0:29,0:4:5.97:0,6,71	0/0:17,0:2:6.02:0,6,87	0/0:22,0:20:4.92:0,5,13	1/1:14,0:13:18.53:221,19,0	1/1:14,0:13:9.15:108,9,0	1/1:16,15:18:47.60:586,48,0	1/1:8,0:8:3.01:52,3,0	1/1:21,0:20:30.08:290,30,0	./.	1/1:10,0:10:9.03:112,9,0	1/1:15,0:14:13.29:148,13,0	1/1:8,0:8:9.50:123,10,0	0/1:26,0:20:6.09:6,0,188	0/1:15,0:14:99:100,0,108	1/1:13,0:9:4.73:37,5,0	0/1:6,0:7:26.83:118,0,27	0/1:12,0:10:34.44:142,0,34	1/1:21,0:18:3.84:37,4,0	0/0:8,0:7:4.95:0,5,76	0/0:17,0:17:0.05:0,0,0	./.	1/1:5,0:5:0.47:1,0,0	1/1:17,0:17:3.01:39,3,0	1/1:0,15:15:39.05:470,39,0	1/1:16,0:14:20.75:264,21,0	1/1:10,0:8:21:236,21,0
chr10	21786693	.	CATACATAG	C	1372.35	PASS	AB=1.000;AC=32;AF=0.615;AN=52;BaseQRankSum=5.824;DP=438;FS=2.117;HRun=0;HaplotypeScore=159.5118;InbreedingCoeff=0.2614;MQ=37.31;MQ0=45;MQRankSum=-5.861;QD=4.87;ReadPosRankSum=-0.660;VQSLOD=2.7399;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:2.08:0,2,465	0/1:7,0:7:5.07:5,0,162	0/0:26,0:4:5.70:0,6,31	0/0:17,0:2:5.86:0,6,37	0/0:21,0:19:17.84:0,18,125	1/1:14,0:14:21.66:143,22,0	1/1:13,0:12:8.47:53,8,0	1/1:29,0:16:41.52:280,42,0	1/1:7,0:7:3:26,3,0	1/1:21,0:20:19.73:109,20,0	./.	1/1:10,0:10:8.88:58,9,0	1/1:11,0:11:12.14:74,12,0	1/1:10,0:10:12.39:91,12,0	0/1:29,0:23:14.40:14,0,386	0/1:16,0:16:27.39:27,0,250	0/1:14,0:10:7.43:7,0,34	0/1:8,0:8:30.23:64,0,30	0/1:12,0:9:94.65:101,0,95	0/1:21,0:19:7.68:8,0,40	0/0:9,0:8:11.79:0,12,135	0/0:0,18:18:0.18:0,0,0	./.	0/1:5,0:5:0:0,0,0	1/1:15,0:15:2.70:20,3,0	1/1:15,0:15:33.48:217,33,0	1/1:15,0:13:20.32:130,20,0	1/1:10,0:8:17.02:105,17,0
chr10	21787484	.	T	TA	433.53	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-5.547;DP=592;FS=2.203;HRun=6;HaplotypeScore=73.5432;InbreedingCoeff=0.9764;MQ=64.86;MQ0=7;MQRankSum=2.198;QD=24.08;ReadPosRankSum=0.610;VQSLOD=3.2709;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:45.04:0,45,446	0/0:6,0:6:14.98:0,15,141	0/0:16,0:11:29.58:0,30,264	0/0:12,0:11:19.42:0,19,205	0/0:39,0:39:99:0,105,1064	0/0:29,0:28:63.07:0,63,630	0/0:10,0:10:27.01:0,27,263	0/0:29,0:29:75.12:0,75,750	0/0:20,0:20:54.01:0,54,526	0/0:29,0:28:78.08:0,78,775	0/0:24,0:24:62.94:0,63,604	0/0:12,0:12:33.08:0,33,337	0/0:21,0:21:50.99:0,51,496	0/0:28,0:28:75.10:0,75,752	1/1:3,15:18:42.13:528,42,0	0/0:20,0:20:48.02:0,48,475	0/0:23,0:22:49.35:0,49,493	0/0:16,0:16:42.05:0,42,413	0/0:18,0:18:50.40:0,50,471	0/0:25,0:25:63.07:0,63,629	0/0:13,0:13:36.08:0,36,367	0/0:28,0:28:66.11:0,66,659	0/0:25,0:25:75.16:0,75,758	0/0:20,0:20:48.02:0,48,476	0/0:21,0:21:63.14:0,63,643	0/0:30,0:30:81.18:0,81,826	0/0:30,0:30:90.21:0,90,918	0/0:12,0:12:33.07:0,33,336
chr10	21787754	.	AC	A	1466.35	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.786;DP=685;FS=5.897;HRun=2;HaplotypeScore=65.8311;InbreedingCoeff=0.9793;MQ=65.83;MQ0=30;MQRankSum=0.883;QD=26.18;ReadPosRankSum=0.935;VQSLOD=3.1527;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:84.27:0,84,1237	0/0:6,0:6:18.06:0,18,270	0/0:28,0:19:57.16:0,57,796	0/0:19,0:15:44.85:0,45,594	1/1:0,28:28:66.21:851,66,0	0/0:20,0:20:51.16:0,51,745	0/0:28,0:25:69.23:0,69,1032	0/0:27,0:23:63.19:0,63,906	0/0:24,0:22:63.19:0,63,902	0/0:35,0:34:99:0,102,1516	0/0:27,0:27:75.22:0,75,1080	0/0:21,0:19:57.19:0,57,849	0/0:25,0:23:63.17:0,63,911	0/0:37,0:37:99:0,102,1467	0/0:32,0:30:84.27:0,84,1236	0/0:31,0:31:90.26:0,90,1323	0/0:21,0:21:63.20:0,63,922	0/0:8,0:8:12.04:0,12,180	0/0:19,0:17:48.13:0,48,695	0/0:22,0:22:66.22:0,66,988	0/0:31,0:31:81.26:0,81,1192	1/1:0,28:28:57.18:737,57,0	0/0:26,0:26:63.21:0,63,942	0/0:23,0:22:63.21:0,63,944	0/0:24,0:24:72.22:0,72,1057	0/0:25,0:24:72.24:0,72,1059	0/0:32,0:32:84.27:0,84,1237	0/0:8,0:8:24.08:0,24,360
chr10	21789267	.	CTGG	C	25642.74	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=5.212;DP=707;FS=2.298;HRun=0;HaplotypeScore=116.6198;InbreedingCoeff=0.9999;MQ=94.93;MQ0=0;MQRankSum=-10.683;QD=43.24;ReadPosRankSum=6.098;VQSLOD=6.2879;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,126,2810	1/1:2,14:16:36.12:600,36,0	0/0:36,0:36:96.18:0,96,1923	0/0:35,0:34:84.24:0,84,1802	1/1:0,23:23:63.22:1048,63,0	1/1:0,28:28:72.25:1199,72,0	1/1:0,20:20:57.19:939,57,0	1/1:3,28:31:84.29:1396,84,0	1/1:1,15:16:45.15:749,45,0	1/1:0,34:34:99:1647,102,0	1/1:1,23:24:63.21:1039,63,0	1/1:1,21:22:60.21:999,60,0	1/1:2,17:19:39.13:648,39,0	1/1:3,36:39:99:1746,105,0	1/1:2,25:26:69.24:1149,69,0	1/1:0,23:23:63.22:1049,63,0	1/1:3,30:33:72.25:1198,72,0	1/1:1,13:14:39.13:649,39,0	1/1:0,15:15:45.14:725,45,0	1/1:1,19:20:51.17:849,51,0	1/1:0,28:28:66.23:1100,66,0	1/1:1,22:23:57.15:919,57,0	1/1:2,23:25:63.22:1049,63,0	1/1:0,21:21:57.19:950,57,0	1/1:0,18:18:42.14:699,42,0	1/1:4,25:28:72.25:1200,72,0	1/1:0,24:24:69.24:1148,69,0	1/1:2,18:21:57.19:948,57,0
chr10	21791105	.	GA	G	2876.70	PASS	AB=0.636;AC=41;AF=0.759;AN=54;BaseQRankSum=-0.608;DP=287;FS=10.596;HRun=7;HaplotypeScore=55.5146;InbreedingCoeff=0.7646;MQ=70.32;MQ0=2;MQRankSum=-0.697;QD=13.70;ReadPosRankSum=2.279;VQSLOD=1.9826;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:29.76:0,30,277	1/1:2,2:3:2.94:18,3,0	0/0:12,1:11:8.28:0,8,175	0/0:7,0:6:11.98:0,12,124	0/0:17,0:17:26.78:0,27,245	./.	1/1:1,14:15:14.23:126,14,0	1/1:1,18:19:54.11:542,54,0	1/1:1,9:9:14.90:122,15,0	1/1:4,7:11:20.99:193,21,0	1/1:2,7:9:14.95:139,15,0	1/1:2,8:10:14.93:129,15,0	1/1:2,6:8:11.89:89,12,0	0/1:3,4:7:5.04:13,0,5	0/0:8,0:8:14.96:0,15,161	1/1:1,8:9:8.69:70,9,0	1/1:2,10:12:20.21:179,20,0	1/1:0,7:7:9.02:91,9,0	1/1:2,12:13:33.05:328,33,0	1/1:3,9:12:20.59:162,21,0	1/1:0,6:6:11.89:92,12,0	0/0:9,0:9:17.99:0,18,205	1/1:4,13:17:29.81:248,30,0	1/1:2,7:9:9.02:92,9,0	1/1:0,9:9:11.86:86,12,0	1/1:0,9:9:27.02:254,27,0	1/1:2,3:6:4.55:34,5,0	1/1:1,6:7:5.98:51,6,0
chr10	21791484	.	C	CA	1205.07	PASS	AB=0.944;AC=35;AF=0.833;AN=42;BaseQRankSum=-3.319;DP=150;FS=1.768;HRun=0;HaplotypeScore=113.3890;InbreedingCoeff=0.1327;MQ=64.29;MQ0=1;MQRankSum=0.386;QD=10.13;ReadPosRankSum=-1.929;VQSLOD=3.7531;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:13,0:13:7.33:34,0,7	./.	0/1:2,0:2:0:0,0,0	0/1:4,1:5:16.06:16,0,37	./.	./.	1/1:9,1:10:10.53:132,11,0	1/1:5,0:5:10.32:163,10,0	0/0:2,0:2:2.04:0,2,6	1/1:4,1:4:11.77:123,12,0	1/1:5,0:5:2.50:9,2,0	1/1:5,1:6:2.50:9,2,0	1/1:6,0:6:3.81:32,4,0	1/1:3,0:3:3.01:30,3,0	./.	1/1:6,0:6:2.16:88,2,0	1/1:6,0:6:4.19:105,4,0	0/0:2,0:2:0:0,0,0	1/1:4,0:4:7.13:76,7,0	1/1:7,0:7:9.01:97,9,0	./.	./.	1/1:5,1:6:6.02:87,6,0	./.	1/1:6,0:6:2.22:7,2,0	1/1:10,0:10:11.27:160,11,0	1/1:8,0:8:7.53:72,8,0	1/1:3,3:6:6.01:61,6,0
chr10	21792155	.	ATGTATCTG	A	8015.08	PASS	AB=0.820;AC=41;AF=0.788;AN=52;BaseQRankSum=5.367;DP=620;FS=3.519;HRun=0;HaplotypeScore=139.9179;InbreedingCoeff=0.5154;MQ=59.08;MQ0=36;MQRankSum=-2.794;QD=16.70;ReadPosRankSum=3.787;VQSLOD=4.0131;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:23:54.17:0,54,1369	1/1:10,1:11:11.72:199,12,0	0/0:28,0:17:48.16:0,48,1212	0/0:40,0:28:84.29:0,84,2200	0/1:1,18:19:0:0,0,0	1/1:22,0:21:12.04:288,12,0	1/1:21,0:18:5.72:84,6,0	1/1:1,34:32:93.25:1718,93,0	1/1:16,0:14:6.02:121,6,0	1/1:1,16:17:39.03:823,39,0	./.	1/1:23,0:21:8.88:227,9,0	1/1:20,0:19:11.86:269,12,0	1/1:26,0:26:11.58:284,12,0	1/1:27,0:27:9.02:184,9,0	1/1:28,1:28:9.29:198,9,0	1/1:24,0:22:11.32:283,11,0	0/1:17,1:15:9.66:229,0,10	1/1:2,13:14:39.12:692,39,0	./.	1/1:41,0:35:2.73:79,3,0	1/1:0,13:13:2.68:32,3,0	0/0:1,19:20:0.47:0,0,1	0/1:31,0:27:4.88:260,0,5	1/1:19,1:19:8.84:238,9,0	1/1:0,25:25:62.72:1391,63,0	1/1:22,0:20:14.88:304,15,0	1/1:4,1:3:6.02:110,6,0
chr10	21792159	.	ATCTG	A	6033.04	PASS	AB=0.823;AC=43;AF=0.827;AN=52;BaseQRankSum=7.773;DP=610;FS=1.829;HRun=0;HaplotypeScore=128.4220;InbreedingCoeff=0.5527;MQ=65.29;MQ0=19;MQRankSum=-3.269;QD=12.44;ReadPosRankSum=4.563;VQSLOD=4.4381;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:24:60.19:0,60,1177	1/1:1,9:10:9.03:140,9,0	0/0:32,0:21:60.20:0,60,1249	0/0:42,0:30:90.30:0,90,1872	0/1:19,0:19:0:0,0,0	1/1:5,17:21:12.04:203,12,0	1/1:3,14:17:3.01:51,3,0	1/1:34,0:32:90.25:1406,90,0	1/1:3,12:14:6.02:85,6,0	1/1:16,1:17:39.13:619,39,0	./.	1/1:2,24:25:8.88:159,9,0	1/1:2,19:20:11.85:199,12,0	1/1:1,25:26:11.43:206,11,0	1/1:1,26:27:6.02:109,6,0	1/1:3,24:27:8.78:130,9,0	1/1:4,19:22:11.91:200,12,0	1/1:2,14:15:9.03:156,9,0	1/1:15,0:14:36.12:580,36,0	./.	1/1:8,30:35:2.66:54,3,0	1/1:13,0:13:2.86:33,3,0	0/1:19,1:20:0:0,0,1	0/1:2,27:28:5.23:187,0,5	1/1:3,16:18:8.72:163,9,0	1/1:25,0:25:62.92:1070,63,0	1/1:2,19:20:11.99:209,12,0	1/1:4,0:3:6.02:73,6,0
chr10	21793388	.	G	GAAAA	827.88	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-0.496;DP=576;FS=0.000;HRun=10;HaplotypeScore=98.5988;InbreedingCoeff=0.8382;MQ=72.85;MQ0=0;MQRankSum=-2.499;QD=33.12;ReadPosRankSum=-1.231;VQSLOD=2.1459;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:36:91.42:0,91,1277	0/0:11,0:11:30.07:0,30,425	0/0:7,0:9:8.42:0,8,108	0/0:9,0:12:5.06:0,5,233	0/0:28,0:30:72.09:0,72,981	0/0:18,0:18:48.13:0,48,679	0/0:21,0:21:54.14:0,54,746	0/0:31,0:32:78.15:0,78,1067	0/0:18,0:18:45.07:0,45,617	0/0:13,0:13:33.07:0,33,452	0/0:23,0:25:54.06:0,54,727	0/0:21,0:21:57.17:0,57,807	0/0:23,0:24:54.07:0,54,764	0/0:20,0:20:57.14:0,57,788	1/1:6,17:25:42.04:923,42,0	0/0:15,0:15:39.10:0,39,552	0/0:26,0:26:66.13:0,66,928	0/0:14,0:14:30.01:0,30,425	0/0:16,0:16:36.01:0,36,492	0/0:17,0:17:39.07:0,39,552	0/0:17,0:18:48.05:0,48,623	0/0:19,0:20:49.40:0,49,682	0/0:18,0:19:44.25:0,44,583	0/0:12,0:14:38.90:0,39,514	0/0:27,0:27:75.20:0,75,1061	0/0:33,0:33:96.31:0,96,1357	0/0:22,0:23:48:0,48,660	0/0:17,0:17:45.13:0,45,637
chr10	21794044	.	TG	T	7835.37	PASS	AB=0.889;AC=52;AF=0.929;AN=56;BaseQRankSum=2.767;DP=527;FS=4.561;HRun=11;HaplotypeScore=102.5689;InbreedingCoeff=0.4424;MQ=76.32;MQ0=0;MQRankSum=-2.281;QD=15.61;ReadPosRankSum=4.587;VQSLOD=5.2393;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,1:25:12.52:0,13,373	1/1:4,6:10:17.97:147,18,0	0/1:21,2:19:14.50:15,0,218	0/1:15,3:14:34.59:35,0,91	1/1:5,0:28:38.69:112,39,0	1/1:4,26:30:71.90:591,72,0	1/1:2,9:11:29.94:243,30,0	1/1:7,13:20:35.92:293,36,0	1/1:2,5:7:14.98:123,15,0	1/1:4,14:18:41.94:343,42,0	1/1:3,13:16:44.91:364,45,0	1/1:3,16:19:21.40:321,21,0	1/1:0,21:21:56.93:468,57,0	1/1:1,15:16:44.95:369,45,0	1/1:1,0:24:42.77:126,43,0	1/1:3,11:14:32.96:271,33,0	1/1:4,10:14:23.96:197,24,0	1/1:5,11:16:32.95:271,33,0	1/1:11,12:24:41.07:344,41,0	1/1:8,25:34:79.90:643,80,0	1/1:1,7:9:23.01:179,23,0	1/1:2,0:19:26.48:77,26,0	1/1:4,12:16:35.94:296,36,0	1/1:0,6:6:17.98:148,18,0	1/1:2,21:23:59.93:493,60,0	1/1:10,18:28:68.78:551,69,0	1/1:2,19:22:58.97:474,59,0	1/1:2,14:16:41.95:345,42,0
chr10	21794531	.	GA	G	1267.70	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.724;DP=566;FS=3.642;HRun=6;HaplotypeScore=55.8511;InbreedingCoeff=0.9832;MQ=71.94;MQ0=1;MQRankSum=0.166;QD=25.35;ReadPosRankSum=2.133;VQSLOD=3.6980;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:66.19:0,66,829	0/0:7,0:7:21.07:0,21,273	0/0:19,0:17:35.40:0,35,401	0/0:7,0:5:14.52:0,15,137	1/1:1,38:39:99:1132,108,0	0/0:23,0:23:63.17:0,63,778	0/0:19,0:19:51.16:0,51,657	0/0:38,0:38:90.28:0,90,1137	0/0:19,0:19:51.17:0,51,662	0/0:21,0:21:54.17:0,54,682	0/0:34,0:34:99:0,99,1253	0/0:15,0:15:42.14:0,42,545	0/0:15,0:15:45.12:0,45,543	0/0:19,0:19:54.15:0,54,675	0/0:29,0:29:84.25:0,84,1064	0/0:19,0:19:57.18:0,57,726	0/0:21,0:21:54.17:0,54,688	0/0:23,0:23:63.15:0,63,766	0/0:13,0:13:36.11:0,36,456	0/0:30,0:30:87.28:0,87,1129	0/0:11,0:11:30.10:0,30,390	1/1:1,10:11:24.06:257,24,0	0/0:14,0:14:39.10:0,39,478	0/0:8,0:8:21.05:0,21,258	0/0:24,0:24:66.17:0,66,827	0/0:19,0:19:54.16:0,54,687	0/0:38,0:38:99:0,111,1412	0/0:7,0:7:21.07:0,21,273
chr10	21794774	.	T	TA	9816.92	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=-12.765;DP=564;FS=6.030;HRun=8;HaplotypeScore=55.7421;InbreedingCoeff=0.9838;MQ=83.98;MQ0=0;MQRankSum=0.329;QD=28.05;ReadPosRankSum=-0.195;VQSLOD=5.1852;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:60.03:0,60,549	0/0:11,0:11:30.02:0,30,275	0/0:16,0:16:27.01:0,27,247	0/0:18,0:17:7.28:0,7,90	0/0:35,0:35:96:0,96,867	1/1:4,25:29:69.21:796,69,0	1/1:4,15:19:45.13:519,45,0	1/1:4,20:24:57.17:658,57,0	1/1:5,6:11:21.01:227,21,0	1/1:3,21:25:66.03:742,66,0	1/1:2,26:28:50.72:823,51,0	1/1:3,10:13:24.07:277,24,0	1/1:3,11:14:36.11:415,36,0	1/1:4,17:21:45.13:519,45,0	1/1:3,23:27:65.25:790,65,0	0/0:14,0:14:36.01:0,36,329	0/0:16,0:16:48.03:0,48,439	0/0:25,0:25:63.02:0,63,576	0/0:17,0:17:42.01:0,42,384	0/0:25,0:25:63:0,63,571	0/0:11,0:11:26.99:0,27,243	0/0:5,0:5:15.01:0,15,137	1/1:3,14:17:42.12:485,42,0	1/1:2,19:21:54.16:623,54,0	1/1:5,30:35:90.27:1039,90,0	1/1:4,31:35:93.28:1073,93,0	1/1:6,19:24:54.16:623,54,0	1/1:0,6:6:18.05:208,18,0
chr10	21794931	.	C	CT	6172.39	PASS	AB=0.588;AC=29;AF=0.518;AN=56;BaseQRankSum=-10.333;DP=523;FS=2.631;HRun=9;HaplotypeScore=53.1650;InbreedingCoeff=0.9021;MQ=76.38;MQ0=1;MQRankSum=-0.468;QD=23.74;ReadPosRankSum=0.055;VQSLOD=5.5724;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:35.97:0,36,307	0/0:9,0:9:23.96:0,24,203	0/0:24,0:18:14.03:0,14,97	0/0:25,0:19:7.94:0,8,160	0/0:25,0:25:59.98:0,60,521	1/1:3,14:17:39.11:431,39,0	1/1:2,10:12:24.06:265,24,0	1/1:12,27:39:32.97:795,33,0	1/1:2,10:12:21.06:232,21,0	1/1:5,18:23:51.14:564,51,0	1/1:11,21:33:51.99:780,52,0	1/1:4,11:15:30.08:332,30,0	1/1:1,11:13:36.09:393,36,0	1/1:2,9:11:1.02:239,1,0	0/0:22,0:23:59.02:0,59,501	0/0:18,0:18:38.97:0,39,339	0/0:25,0:25:71.95:0,72,619	0/0:20,0:20:47.99:0,48,416	0/0:20,0:20:47.99:0,48,417	0/0:36,0:36:95.97:0,96,833	0/0:11,0:11:29.98:0,30,260	0/0:13,0:13:23.99:0,24,208	1/1:0,19:19:51.14:562,51,0	1/1:0,9:9:27.07:299,27,0	1/1:2,12:14:33.09:365,33,0	0/1:6,14:20:3.97:417,0,4	1/1:3,7:10:21.06:232,21,0	1/1:1,12:13:24.06:265,24,0
chr10	21795792	.	T	TA	798.20	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.903;DP=621;FS=5.125;HRun=5;HaplotypeScore=62.3279;InbreedingCoeff=0.9934;MQ=74.94;MQ0=0;MQRankSum=-0.530;QD=33.26;ReadPosRankSum=1.267;VQSLOD=4.2627;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:57.14:0,57,612	0/0:9,0:9:24.06:0,24,257	0/0:14,0:13:22.72:0,23,279	0/0:17,0:18:32.59:0,33,381	0/0:38,0:38:99:0,108,1143	0/0:32,0:32:90.18:0,90,945	0/0:11,0:11:30.08:0,30,322	0/0:26,0:26:63.13:0,63,663	0/0:20,0:20:57.14:0,57,612	0/0:41,0:41:99:0,111,1182	0/0:15,0:15:42.11:0,42,451	0/0:13,0:13:33.08:0,33,355	0/0:28,0:28:72.16:0,72,764	0/0:26,0:26:72.18:0,72,773	1/1:17,7:24:69.22:893,69,0	0/0:24,0:24:63.14:0,63,668	0/0:16,0:16:42.10:0,42,451	0/0:14,0:14:36.09:0,36,387	0/0:17,0:17:39.07:0,39,403	0/0:24,0:24:63.16:0,63,677	0/0:21,0:21:57.14:0,57,613	0/0:29,0:29:81.18:0,81,857	0/0:25,0:25:66.15:0,66,700	0/0:18,0:18:51.13:0,51,547	0/0:22,0:22:60.14:0,60,634	0/0:27,0:27:75.19:0,75,806	0/0:37,0:37:98.98:0,99,1017	0/0:11,0:11:30.08:0,30,322
chr10	21795800	.	AT	A	549.12	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.122;DP=616;FS=2.516;HRun=9;HaplotypeScore=63.0202;InbreedingCoeff=0.9839;MQ=75.70;MQ0=0;MQRankSum=-0.439;QD=20.34;ReadPosRankSum=0.449;VQSLOD=4.2970;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,1:27:44.71:0,45,754	0/0:8,0:8:21.06:0,21,242	0/0:17,1:17:41.07:0,41,426	0/0:15,0:15:17.32:0,17,320	0/0:36,0:36:96.29:0,96,1108	0/0:30,0:30:87.26:0,87,1004	0/0:10,0:10:30.07:0,30,335	0/0:24,0:24:57.16:0,57,650	0/0:19,0:19:48.13:0,48,546	0/0:39,1:40:80.85:0,81,1184	0/0:18,0:18:48.14:0,48,554	0/0:11,0:11:27.08:0,27,311	0/0:25,0:25:66.20:0,66,762	0/0:27,0:27:72.21:0,72,830	1/1:21,6:27:71.99:644,72,0	0/0:24,0:24:72.21:0,72,831	0/0:16,0:16:39.12:0,39,450	0/0:16,0:16:39.09:0,39,437	0/0:15,0:15:39.11:0,39,442	0/0:22,0:22:60.18:0,60,692	0/0:21,0:21:54.14:0,54,605	0/0:27,0:27:78.21:0,78,880	0/0:25,0:25:63.18:0,63,719	0/0:17,0:17:42.12:0,42,484	0/0:26,0:26:66.17:0,66,743	0/0:27,1:28:44.75:0,45,769	0/0:33,0:34:90.08:0,90,1007	0/0:10,0:10:27.08:0,27,312
chr10	21798062	.	AC	A	1723.45	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=7.660;DP=514;FS=21.110;HRun=1;HaplotypeScore=49.9569;InbreedingCoeff=0.9934;MQ=85.15;MQ0=0;MQRankSum=-5.231;QD=34.47;ReadPosRankSum=0.449;VQSLOD=1.7946;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,27:27:69.23:965,69,0	0/0:6,0:6:18.06:0,18,288	0/0:20,0:20:57.16:0,57,861	0/0:12,0:12:29.96:0,30,408	1/1:0,10:10:27.05:356,27,0	0/0:19,0:19:57.18:0,57,887	0/0:25,0:25:75.22:0,75,1148	0/0:26,0:26:78.26:0,78,1226	0/0:17,0:17:51.16:0,51,791	0/0:7,0:7:21.06:0,21,315	0/0:11,0:11:33.10:0,33,503	0/0:23,0:23:69.22:0,69,1080	0/0:21,0:21:63.21:0,63,1007	0/0:23,0:23:69.24:0,69,1098	0/0:21,0:21:60.19:0,60,936	0/0:21,0:21:63.21:0,63,1005	0/0:26,0:26:78.25:0,78,1217	0/0:7,0:7:21.07:0,21,332	0/0:23,0:23:69.24:0,69,1103	0/0:17,0:17:48.16:0,48,766	0/0:28,0:28:84.29:0,84,1338	1/1:0,13:13:39.13:546,39,0	0/0:11,0:11:33.11:0,33,527	0/0:27,0:27:81.28:0,81,1295	0/0:16,0:16:48.16:0,48,763	0/0:14,0:14:42.14:0,42,672	0/0:31,0:31:93.32:0,93,1476	0/0:12,0:12:36.12:0,36,572
chr10	21800092	.	ATCTCTCTCTCTC	A	183.62	PASS	AB=0.852;AC=7;AF=0.140;AN=50;BaseQRankSum=1.616;DP=487;FS=1.461;HRun=0;HaplotypeScore=154.6874;InbreedingCoeff=0.3491;MQ=64.73;MQ0=8;MQRankSum=-0.235;QD=2.66;ReadPosRankSum=-0.853;VQSLOD=2.8089;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:5.92:0,6,39	0/0:8,0:8:5.50:0,6,27	./.	0/0:26,0:13:0:0,0,0	1/1:15,2:18:13.07:87,13,0	0/0:19,0:19:9.02:0,9,309	0/0:15,0:15:8.85:0,9,72	0/0:30,0:30:2.96:0,3,19	0/0:20,0:19:15.02:0,15,475	0/0:23,0:23:18.04:0,18,464	0/0:19,0:19:0.87:0,1,22	0/0:16,0:16:9:0,9,189	0/0:12,0:12:0:0,0,0	1/1:15,0:15:0.88:2,1,0	./.	0/1:19,1:23:63.87:167,0,64	0/0:15,0:15:2.94:0,3,18	0/0:10,0:8:1.55:0,2,4	0/0:14,0:13:5.93:0,6,40	0/0:11,0:11:7.56:0,8,46	./.	1/1:12,1:13:5.60:36,6,0	0/0:21,0:21:0:0,0,0	0/0:24,0:21:3.46:0,3,25	0/0:21,0:21:6.01:0,6,185	0/0:13,0:12:8.99:0,9,78	0/0:14,0:13:14.77:0,15,98	0/0:8,0:6:2.99:0,3,24
chr10	21800157	.	TCTCACACACA	T	2807.90	PASS	AB=1.000;AC=12;AF=0.214;AN=56;BaseQRankSum=-0.965;DP=441;FS=5.491;HRun=0;HaplotypeScore=126.0991;InbreedingCoeff=0.5616;MQ=47.22;MQ0=44;MQRankSum=-7.250;QD=28.65;ReadPosRankSum=-3.257;VQSLOD=2.1645;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:26:18.28:0,18,594	1/1:6,10:14:18.06:577,18,0	0/0:2,0:1:3.01:0,3,117	0/0:4,0:2:3.01:0,3,109	0/0:29,0:25:26.48:0,26,558	0/0:15,0:15:6.28:0,6,109	0/0:20,0:16:6.36:0,6,173	0/0:32,0:29:71.74:0,72,670	0/0:16,0:15:15.02:0,15,187	0/0:13,0:12:33.92:0,34,281	0/0:10,0:10:5.95:0,6,79	0/0:13,0:10:5.82:0,6,69	0/0:12,0:11:12.97:0,13,108	0/1:15,0:13:6.56:7,0,35	0/0:21,0:20:18.04:0,18,568	1/1:5,9:13:20.95:605,21,0	1/1:0,11:11:9.03:265,9,0	0/1:14,0:12:82.47:263,0,82	1/1:6,7:11:20.94:357,21,0	1/1:2,13:13:30.10:903,30,0	0/0:3,14:16:3.01:0,3,106	0/0:20,0:16:11.94:0,12,419	0/0:15,0:12:7.80:0,8,127	0/0:24,0:19:7.78:0,8,104	0/0:11,0:10:2.45:0,2,43	0/0:16,0:11:31.83:0,32,312	0/0:21,0:21:22.56:0,23,273	0/0:5,0:3:8.89:0,9,65
chr10	21800159	.	TCA	T	2528.47	PASS	AB=1.000;AC=46;AF=0.821;AN=56;BaseQRankSum=-1.665;DP=453;FS=4.965;HRun=0;HaplotypeScore=101.1432;InbreedingCoeff=0.4025;MQ=47.58;MQ0=44;MQRankSum=0.388;QD=6.37;ReadPosRankSum=-0.347;VQSLOD=2.6808;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:27:17.97:0,18,146	1/1:15,0:13:17.36:95,17,0	0/0:4,0:1:3:0,3,25	0/0:7,0:2:2.90:0,3,16	1/1:11,17:25:27.36:268,27,0	1/1:5,9:15:3.01:35,3,0	1/1:10,11:17:8.86:103,9,0	1/1:32,1:30:24.52:262,25,0	1/1:6,11:16:5.96:69,6,0	1/1:13,0:12:20.81:174,21,0	1/1:3,7:10:8.71:99,9,0	1/1:9,6:12:6.48:70,6,0	1/1:4,8:11:8.96:86,9,0	1/1:8,6:13:5.88:50,6,0	0/1:22,0:21:13.91:14,0,106	1/1:14,0:13:17.27:97,17,0	1/1:11,0:11:8.73:50,9,0	0/1:13,0:11:16.81:26,0,17	1/1:12,0:10:2.94:24,3,0	1/1:15,0:13:29.12:165,29,0	0/0:17,0:16:2.98:0,3,21	1/1:9,11:16:15.04:171,15,0	1/1:4,12:13:9.01:104,9,0	1/1:15,10:20:9.03:103,9,0	1/1:4,6:9:3:35,3,0	1/1:8,9:13:26.81:249,27,0	1/1:4,18:22:18.65:236,19,0	1/1:5,0:3:9:90,9,0
chr10	21801643	.	A	AT	811.05	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-7.021;DP=442;FS=15.320;HRun=6;HaplotypeScore=39.4678;InbreedingCoeff=0.9280;MQ=66.69;MQ0=1;MQRankSum=0.845;QD=28.97;ReadPosRankSum=0.016;VQSLOD=2.1502;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,26:28:72.23:906,72,0	0/0:9,0:9:27.06:0,27,275	0/0:5,0:5:9.02:0,9,92	0/0:10,0:10:18.03:0,18,180	0/0:26,0:26:66.14:0,66,673	0/0:16,0:16:48.11:0,48,490	0/0:11,0:11:33.08:0,33,337	0/0:26,0:26:60.12:0,60,607	0/0:14,0:14:36.08:0,36,367	0/0:20,0:20:51.11:0,51,520	0/0:17,0:17:45.10:0,45,459	0/0:17,0:17:36.07:0,36,367	0/0:13,0:13:33.07:0,33,336	0/0:20,0:20:54.11:0,54,544	0/0:14,0:14:33.06:0,33,330	0/0:16,0:16:39.08:0,39,392	0/0:15,0:14:27.06:0,27,275	0/0:15,0:15:45.09:0,45,452	0/0:8,0:8:24.05:0,24,245	0/0:22,0:22:51.11:0,51,520	0/0:7,0:7:21.05:0,21,214	0/0:16,0:16:45.09:0,45,452	0/0:15,0:15:42.10:0,42,429	0/0:18,0:18:51.11:0,51,520	0/0:19,0:19:45.10:0,45,459	0/0:19,0:19:57.13:0,57,582	0/0:18,0:18:51.12:0,51,520	0/0:8,0:8:24.05:0,24,245
chr10	21803087	.	AT	A	591.98	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.152;DP=594;FS=0.851;HRun=1;HaplotypeScore=53.3091;InbreedingCoeff=0.9598;MQ=72.09;MQ0=0;MQRankSum=-0.835;QD=31.16;ReadPosRankSum=-0.599;VQSLOD=3.0836;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,19:19:51.10:687,51,0	0/0:7,0:7:21.07:0,21,314	0/0:13,0:13:32.28:0,32,499	0/0:6,0:6:11.14:0,11,190	0/0:31,0:31:93.30:0,93,1367	0/0:17,0:17:51.17:0,51,763	0/0:11,0:11:33.08:0,33,454	0/0:33,0:33:94.17:0,94,1254	0/0:17,0:17:51.16:0,51,742	0/0:24,0:24:72.24:0,72,1071	0/0:33,0:33:96.27:0,96,1347	0/0:23,0:23:69.14:0,69,910	0/0:21,0:21:63.21:0,63,943	0/0:13,0:13:36.12:0,36,538	0/0:17,0:17:51.13:0,51,703	0/0:25,0:25:75.20:0,75,1042	0/0:16,0:16:48.04:0,48,624	0/0:20,0:20:60.19:0,60,876	0/0:27,0:27:81.26:0,81,1182	0/0:33,0:33:99:0,99,1417	0/0:17,0:17:51.11:0,51,698	0/0:17,0:17:51.17:0,51,763	0/0:26,0:26:78.23:0,78,1124	0/0:16,0:16:48.12:0,48,674	0/0:27,0:27:81.26:0,81,1191	0/0:32,0:32:96.31:0,96,1402	0/0:29,0:28:87.23:0,87,1234	0/0:24,0:24:72.24:0,72,1077
chr10	21803845	.	AT	A	897.38	PASS	AB=0.944;AC=6;AF=0.107;AN=56;BaseQRankSum=8.866;DP=534;FS=2.193;HRun=7;HaplotypeScore=47.9329;InbreedingCoeff=0.6069;MQ=63.84;MQ0=0;MQRankSum=-0.890;QD=17.95;ReadPosRankSum=-0.330;VQSLOD=3.1487;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,10:10:27.06:275,27,0	0/0:5,0:5:15.05:0,15,189	0/1:5,0:5:12.76:13,0,87	0/0:1,0:1:3.01:0,3,31	0/0:35,0:35:93.28:0,93,1146	0/0:31,0:31:87.27:0,87,1083	0/0:10,0:10:27.09:0,27,340	0/0:39,0:39:96.30:0,96,1195	0/0:13,0:13:36.12:0,36,453	0/0:32,0:32:87.28:0,87,1094	0/0:32,0:32:90.27:0,90,1109	0/0:18,0:18:54.17:0,54,678	0/0:20,0:20:57.18:0,57,717	0/0:20,0:20:54.17:0,54,679	1/1:1,26:27:72.16:735,72,0	0/0:21,0:21:60.19:0,60,755	0/0:22,0:22:57.09:0,57,684	0/0:21,0:21:57.16:0,57,699	0/0:11,0:11:30.10:0,30,377	0/0:43,0:43:99:0,123,1547	0/0:10,0:10:30.10:0,30,377	0/0:8,0:8:21.07:0,21,264	0/0:8,0:8:24.06:0,24,289	0/0:6,0:6:18.06:0,18,226	0/0:28,0:28:78.24:0,78,968	0/0:31,0:30:87.27:0,87,1084	0/0:19,0:19:57.18:0,57,717	0/1:7,1:8:6.16:6,0,240
chr10	21804175	.	GAGA	G	621.25	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.448;DP=599;FS=0.000;HRun=0;HaplotypeScore=82.0243;InbreedingCoeff=0.9388;MQ=86.18;MQ0=0;MQRankSum=-3.704;QD=44.38;ReadPosRankSum=0.975;VQSLOD=5.2404;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,14:14:42.14:716,42,0	0/0:3,0:3:9.03:0,9,206	0/0:22,0:21:54.18:0,54,1198	0/0:18,0:18:45.10:0,45,887	0/0:37,0:37:99:0,108,2435	0/0:30,0:30:90.31:0,90,2013	0/0:21,0:21:63.22:0,63,1449	0/0:32,0:32:87.28:0,87,1873	0/0:15,0:15:45.15:0,45,987	0/0:25,0:25:69.24:0,69,1576	0/0:32,0:32:90.29:0,90,2007	0/0:15,0:15:45.14:0,45,993	0/0:26,0:26:78.27:0,78,1745	0/0:17,0:17:51.17:0,51,1150	0/0:18,0:18:48.16:0,48,1090	0/0:24,0:24:69.23:0,69,1531	0/0:23,0:23:63.22:0,63,1426	0/0:12,0:12:36.12:0,36,824	0/0:29,0:29:84.27:0,84,1772	0/0:35,0:35:99:0,102,2352	0/0:9,0:9:27.09:0,27,602	0/0:16,0:16:45.15:0,45,987	0/0:30,0:30:90.31:0,90,2044	0/0:9,0:9:21.07:0,21,481	0/0:21,0:19:60.21:0,60,1384	0/0:32,0:32:93.32:0,93,2129	0/0:26,0:26:78.25:0,78,1721	0/0:8,0:8:24.08:0,24,554
chr10	21805430	.	CCGGCTAGT	C	1596.17	PASS	AB=1.000;AC=3;AF=0.056;AN=54;BaseQRankSum=4.689;DP=581;FS=5.142;HRun=0;HaplotypeScore=178.9846;InbreedingCoeff=0.6114;MQ=61.21;MQ0=0;MQRankSum=-5.667;QD=53.21;ReadPosRankSum=-0.071;VQSLOD=2.8014;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/0:10,0:10:21.07:0,21,874	0/0:6,0:6:11.32:0,11,124	0/1:7,0:7:36.36:36,0,243	0/0:18,0:18:45.11:0,45,1579	0/0:20,0:20:11.23:0,11,1881	0/0:29,0:29:87.30:0,87,2919	0/0:30,0:30:81.28:0,81,2748	0/0:27,0:27:78.27:0,78,2714	0/0:18,0:18:24.21:0,24,1622	0/0:15,0:15:42.14:0,42,1409	0/0:27,0:27:56.28:0,56,2483	0/0:25,0:25:75.26:0,75,2554	0/0:30,0:30:87.30:0,87,3086	1/1:1,22:23:57.20:1665,57,0	0/0:16,0:16:45.14:0,45,1927	0/0:38,0:38:99:0,114,4907	0/0:26,0:26:78.27:0,78,3529	0/0:19,0:19:54.19:0,54,2077	0/0:11,0:11:27.09:0,27,1008	0/0:43,0:43:99:0,129,5161	0/0:16,0:16:44.98:0,45,1608	0/0:20,0:20:57.20:0,57,1907	0/0:32,0:31:72.33:0,72,3192	0/0:23,0:23:68.97:0,69,2341	0/0:23,0:23:68.97:0,69,2084	0/0:18,0:18:48.16:0,48,1684	0/0:11,0:11:27.46:0,27,793
chr10	21805843	.	G	GA	2729.56	PASS	AB=0.667;AC=17;AF=0.315;AN=54;BaseQRankSum=-3.991;DP=565;FS=4.181;HRun=10;HaplotypeScore=64.8860;InbreedingCoeff=0.8821;MQ=64.22;MQ0=4;MQRankSum=-0.607;QD=16.34;ReadPosRankSum=1.371;VQSLOD=4.1733;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	1/1:2,8:10:21.05:223,21,0	0/0:20,0:6:11.96:0,12,95	0/0:23,0:10:13.56:0,14,161	1/1:8,1:36:63.36:342,63,0	0/0:15,0:15:32.92:0,33,267	0/0:21,0:21:44.89:0,45,365	0/0:30,1:31:36.89:0,37,508	0/0:17,0:19:45.98:0,46,353	0/0:33,0:33:80.85:0,81,660	0/0:19,1:20:15.95:0,16,337	0/0:20,1:22:17.96:0,18,343	0/0:23,0:23:59.68:0,60,489	0/0:19,0:20:43.95:0,44,348	0/0:27,0:27:68.89:0,69,566	1/1:4,24:28:35.51:583,36,0	1/1:3,24:27:54.14:576,54,0	1/1:6,11:17:30.05:310,30,0	1/1:1,11:12:33.08:352,33,0	1/1:1,13:14:30.08:320,30,0	0/1:3,3:6:12.57:84,0,13	1/1:3,1:17:24.04:144,24,0	0/0:15,0:15:35.93:0,36,295	0/0:21,0:21:50.90:0,51,414	0/0:23,2:25:27.90:0,28,436	0/0:23,0:23:59.71:0,60,481	0/0:27,0:26:59.89:0,60,492	0/0:11,2:13:3.98:0,4,239
chr10	21806215	.	A	AT	2256.77	PASS	AC=4;AF=0.074;AN=54;BaseQRankSum=8.141;DP=713;FS=3.222;HRun=1;HaplotypeScore=70.9092;InbreedingCoeff=0.9959;MQ=87.02;MQ0=0;MQRankSum=-4.382;QD=35.82;ReadPosRankSum=1.747;VQSLOD=4.0170;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/0:17,0:17:51.15:0,51,648	0/0:23,0:23:66.21:0,66,853	0/0:24,0:24:69.19:0,69,839	1/1:3,30:33:78.18:1119,78,0	0/0:24,0:24:72.23:0,72,935	0/0:27,0:27:75.23:0,75,959	0/0:31,0:31:90.27:0,90,1143	0/0:19,0:19:57.17:0,57,725	0/0:29,0:29:81.26:0,81,1052	0/0:22,0:22:63.20:0,63,818	0/0:34,0:34:99:0,102,1325	0/0:41,0:41:99:0,123,1582	0/0:27,0:27:81.25:0,81,1034	0/0:25,0:25:75.23:0,75,960	0/0:34,0:34:99:0,99,1272	0/0:32,0:32:90.29:0,90,1168	0/0:20,0:20:60.20:0,60,779	0/0:28,0:28:84.23:0,84,1036	0/0:29,0:29:84.25:0,84,1060	0/0:22,0:22:63.16:0,63,784	1/1:1,29:30:84.28:1259,84,0	0/0:23,0:23:63.20:0,63,818	0/0:20,0:20:54.18:0,54,701	0/0:26,0:26:78.25:0,78,1013	0/0:34,0:34:99:0,99,1285	0/0:33,0:33:96.31:0,96,1245	0/0:6,0:6:18.06:0,18,234
chr10	21806836	.	T	TGCA	1166.41	PASS	AB=0.958;AC=9;AF=0.161;AN=56;BaseQRankSum=3.299;DP=500;FS=10.025;HRun=0;HaplotypeScore=100.1649;InbreedingCoeff=0.7878;MQ=46.11;MQ0=104;MQRankSum=-5.600;QD=16.90;ReadPosRankSum=0.685;VQSLOD=2.5239;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,6:6:12.04:209,12,0	0/0:13,0:13:33.03:0,33,496	0/0:42,0:7:12.93:0,13,195	0/0:38,0:10:16.27:0,16,259	1/1:6,10:10:27.06:448,27,0	0/0:19,0:13:24.97:0,25,408	0/0:8,0:7:12.93:0,13,217	0/0:35,0:29:59.11:0,59,838	0/0:14,0:11:18.05:0,18,259	0/0:22,0:21:52.77:0,53,821	0/0:14,0:11:32.59:0,33,488	0/0:19,0:17:34.92:0,35,512	0/0:11,0:9:22.80:0,23,330	0/0:8,0:6:9.50:0,10,152	1/1:1,9:9:24.08:406,24,0	0/0:11,0:8:18.53:0,19,278	0/0:24,0:15:38.97:0,39,554	0/0:15,0:10:14.96:0,15,169	0/0:34,0:29:75.29:0,75,1184	0/0:20,0:17:45.07:0,45,643	0/0:3,0:2:3.48:0,3,53	1/1:2,7:7:15.01:251,15,0	0/0:13,0:12:26.95:0,27,399	0/0:10,0:7:14.07:0,14,183	0/0:30,0:24:59.44:0,59,914	0/0:13,0:12:27.43:0,27,403	0/1:22,1:18:11.44:11,0,475	0/0:14,0:12:30.10:0,30,484
chr10	21806849	.	TTTTTTTTTA	T	1762.03	PASS	AB=0.975;AC=19;AF=0.339;AN=56;BaseQRankSum=6.449;DP=591;FS=58.859;HRun=0;HaplotypeScore=123.8154;InbreedingCoeff=-0.2035;MQ=34.57;MQ0=179;MQRankSum=-4.019;QD=4.65;ReadPosRankSum=8.868;VQSLOD=-0.5872;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:3:8.54:0,9,44	1/1:11,0:11:23.19:394,23,0	0/1:44,0:2:0.86:1,0,56	0/0:36,0:6:15.35:0,15,181	0/0:12,0:4:8.66:0,9,48	0/1:25,0:15:28.74:29,0,102	0/1:8,0:7:10.75:11,0,44	0/0:38,0:29:68.55:0,69,731	0/0:21,0:16:7.77:0,8,117	0/0:27,0:21:3.95:0,4,323	0/0:21,0:16:15.55:0,16,223	0/1:21,0:16:7:7,0,184	0/1:15,0:10:7.97:8,0,106	0/1:11,0:8:1.73:2,0,49	0/0:8,0:6:17.46:0,17,97	0/1:17,0:12:65.32:122,0,65	0/1:28,1:19:75.97:360,0,76	0/1:19,6:13:27.86:69,0,28	0/1:35,1:23:99:254,0,161	0/1:19,3:18:15.80:545,0,16	0/0:9,0:4:4.17:0,4,20	0/0:4,0:2:5.74:0,6,31	0/1:18,0:15:0.46:0,0,129	1/1:14,0:7:2.46:18,2,0	0/1:32,0:25:36.31:36,0,230	0/0:19,0:16:9.62:0,10,294	0/1:29,0:23:5.02:5,0,110	0/1:22,0:19:51.57:52,0,192
chr10	21807825	.	CT	C	1239.98	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.146;DP=525;FS=1.285;HRun=5;HaplotypeScore=51.8775;InbreedingCoeff=0.9967;MQ=81.53;MQ0=0;MQRankSum=-3.575;QD=27.56;ReadPosRankSum=0.797;VQSLOD=3.3122;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:33.11:0,33,451	0/0:10,0:10:30.10:0,30,410	0/0:17,0:17:48.15:0,48,632	0/0:12,0:12:36.04:0,36,433	1/1:2,32:34:93.26:1055,93,0	0/0:22,0:22:66.20:0,66,873	0/0:15,0:15:45.15:0,45,615	0/0:30,0:30:75.24:0,75,1012	0/0:13,0:13:39.13:0,39,533	0/0:28,0:28:81.25:0,81,1079	0/0:23,0:23:66.22:0,66,903	0/0:23,0:23:69.23:0,69,944	0/0:26,0:26:78.26:0,78,1064	0/0:16,0:16:45.15:0,45,615	0/0:19,0:19:51.14:0,51,678	0/0:26,0:26:75.25:0,75,1026	0/0:9,0:9:27.09:0,27,369	0/0:10,0:10:27.09:0,27,369	0/0:18,0:18:48.16:0,48,652	0/0:27,0:27:75.21:0,75,992	0/0:8,0:8:24.08:0,24,328	1/1:1,10:11:27.08:306,27,0	0/0:15,0:15:45.14:0,45,597	0/0:12,0:12:33.07:0,33,417	0/0:22,0:22:60.20:0,60,821	0/0:20,0:20:57.19:0,57,780	0/0:32,0:32:90.30:0,90,1229	0/0:13,0:13:39.13:0,39,533
chr10	21808093	.	A	AT	622.26	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-5.959;DP=560;FS=4.548;HRun=6;HaplotypeScore=52.2633;InbreedingCoeff=0.8712;MQ=74.68;MQ0=0;MQRankSum=-3.944;QD=27.05;ReadPosRankSum=0.033;VQSLOD=3.8856;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,21:23:57.18:717,57,0	0/0:9,0:9:24.05:0,24,245	0/0:5,0:4:12.03:0,12,121	0/0:14,0:15:30.43:0,30,287	0/0:30,0:30:84.17:0,84,850	0/0:20,0:20:54.12:0,54,551	0/0:6,0:6:18.04:0,18,184	0/0:34,0:34:96.22:0,96,980	0/0:18,0:18:48.09:0,48,481	0/0:27,0:27:75.17:0,75,765	0/0:32,0:32:90.20:0,90,918	0/0:16,0:16:45.10:0,45,459	0/0:28,0:28:84.19:0,84,857	0/0:16,0:16:48.10:0,48,483	0/0:21,0:21:48.10:0,48,484	0/0:19,0:19:51.11:0,51,515	0/0:19,0:19:51.11:0,51,520	0/0:10,0:10:27.06:0,27,275	0/0:15,0:15:45.09:0,45,454	0/0:33,0:33:93.20:0,93,942	0/0:16,0:16:45.10:0,45,459	0/0:19,0:19:54.12:0,54,551	0/0:23,0:23:63.08:0,63,620	0/0:18,0:18:45.08:0,45,452	0/0:34,0:34:96.22:0,96,979	0/0:18,0:18:54.12:0,54,551	0/0:32,0:31:96.22:0,96,979	0/0:4,0:4:6.01:0,6,61
chr10	21808157	.	GGTCAAA	G	992.84	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.994;DP=590;FS=0.965;HRun=0;HaplotypeScore=118.4064;InbreedingCoeff=0.9799;MQ=70.90;MQ0=0;MQRankSum=-6.703;QD=52.25;ReadPosRankSum=0.915;VQSLOD=3.4687;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:51.13:0,51,1638	0/0:9,0:9:27.09:0,27,903	0/0:7,0:7:18.04:0,18,476	0/0:9,0:9:24.08:0,24,684	0/0:39,0:39:99:0,114,3886	0/0:19,0:19:51.16:0,51,1706	0/0:7,0:7:21.07:0,21,675	0/0:23,0:23:69.24:0,69,2334	0/0:18,0:18:54.18:0,54,1724	0/0:40,0:40:99:0,105,3563	0/0:28,0:28:78.27:0,78,2687	0/0:24,0:24:69.24:0,69,2360	0/0:27,0:27:78.25:0,78,2634	0/0:18,0:18:51.17:0,51,1678	1/1:0,19:19:48.16:1088,48,0	0/0:24,0:24:69.24:0,69,2330	0/0:27,0:27:81.28:0,81,2775	0/0:9,0:9:27.09:0,27,943	0/0:21,0:21:60.21:0,60,1994	0/0:26,0:26:78.27:0,78,2556	0/0:12,0:12:33.11:0,33,1111	0/0:16,0:16:48.16:0,48,1562	0/0:19,0:19:54.19:0,54,1869	0/0:10,0:10:21.07:0,21,736	0/0:36,0:36:99:0,99,3344	0/0:12,0:12:36.12:0,36,1262	0/0:51,0:51:99:0,148,5045	0/0:20,0:20:60.21:0,60,1995
chr10	21808911	.	C	CTCTA	2967.34	PASS	AB=0.622;AC=13;AF=0.250;AN=52;BaseQRankSum=-3.918;DP=665;FS=1.179;HRun=0;HaplotypeScore=127.7206;InbreedingCoeff=0.8490;MQ=66.46;MQ0=2;MQRankSum=-0.080;QD=17.25;ReadPosRankSum=-1.249;VQSLOD=3.2402;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:8.68:0,9,59	0/0:4,0:4:9.02:0,9,118	./.	./.	1/1:33,0:33:12.02:137,12,0	0/0:25,0:25:48.15:0,48,705	0/0:14,0:15:17.76:0,18,278	0/0:38,0:38:11.72:0,12,177	0/0:28,0:28:42.11:0,42,625	0/0:29,0:29:57.18:0,57,854	1/1:15,5:27:29.02:530,29,0	0/0:27,0:27:45.13:0,45,650	0/0:36,0:36:54.08:0,54,756	0/0:24,0:24:39.13:0,39,604	0/0:9,0:32:41.81:0,42,327	0/1:11,15:28:10.29:740,0,10	0/0:28,0:27:23.72:0,24,499	1/1:6,7:13:9.03:212,9,0	1/1:11,4:16:21.04:412,21,0	0/0:31,0:31:45.11:0,45,669	1/1:14,17:31:39.13:917,39,0	1/1:23,0:23:18.04:200,18,0	0/0:24,0:24:39.13:0,39,604	0/0:15,0:15:15.03:0,15,204	0/0:15,0:16:21.04:0,21,278	0/0:30,0:30:54.18:0,54,825	0/0:28,0:28:39.13:0,39,603	0/0:16,0:16:15.05:0,15,233
chr10	21809220	.	T	TA	183.86	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=-1.278;DP=538;FS=1.082;HRun=10;HaplotypeScore=66.5288;InbreedingCoeff=0.5653;MQ=76.98;MQ0=2;MQRankSum=1.888;QD=4.48;ReadPosRankSum=-1.008;VQSLOD=0.4775;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:71.86:0,72,586	0/0:7,0:7:11.97:0,12,96	0/0:26,0:20:6.85:0,7,107	0/1:25,0:21:2:2,0,167	0/0:25,0:26:64.56:0,65,508	0/0:15,0:15:38.94:0,39,319	0/0:19,0:19:44.91:0,45,368	0/0:24,0:24:65.91:0,66,540	0/0:16,0:16:35.94:0,36,296	0/0:25,0:25:59.64:0,60,477	0/0:15,0:15:36.42:0,36,294	0/0:15,0:15:41.95:0,42,345	0/0:21,0:21:50.89:0,51,414	0/0:25,0:25:68.89:0,69,563	1/1:3,12:15:5.44:263,5,0	0/0:15,0:15:38.95:0,39,320	0/0:23,0:23:65.87:0,66,534	0/0:17,0:18:37.98:0,38,301	0/0:18,0:19:46.93:0,47,369	0/0:29,0:30:79.93:0,80,644	0/0:12,0:12:35.95:0,36,295	0/0:16,0:16:41.90:0,42,340	0/0:17,0:17:50.94:0,51,418	0/0:22,0:22:56.91:0,57,464	0/0:21,0:21:53.91:0,54,440	0/0:23,0:23:56.91:0,57,465	0/0:14,0:14:29.89:0,30,238	0/0:6,0:6:14.97:0,15,123
chr10	21810768	.	GAC	G	1422.15	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=0.768;DP=659;FS=2.350;HRun=0;HaplotypeScore=135.2648;InbreedingCoeff=0.9026;MQ=77.41;MQ0=0;MQRankSum=0.997;QD=41.83;ReadPosRankSum=1.927;VQSLOD=4.9382;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,144,2858	0/0:11,0:11:33.11:0,33,659	0/0:14,0:14:39.07:0,39,699	0/0:21,0:21:59.80:0,60,1135	0/0:27,0:27:75.24:0,75,1481	0/0:23,0:23:69.22:0,69,1361	0/0:23,0:23:69.22:0,69,1364	0/0:31,0:31:87.28:0,87,1670	0/0:21,0:21:63.15:0,63,1221	0/0:28,0:28:78.26:0,78,1477	0/0:16,0:16:42.14:0,42,835	0/0:28,0:28:75.24:0,75,1480	0/0:24,0:24:69.22:0,69,1344	0/0:32,0:32:96.25:0,96,1842	1/1:0,34:34:93.32:1517,93,0	0/0:27,0:27:81.25:0,81,1537	0/0:35,0:35:99:0,105,1979	0/0:12,0:12:36.12:0,36,731	0/0:23,0:23:69.24:0,69,1401	0/0:17,0:17:47.66:0,48,969	0/0:40,0:40:99:0,114,2237	0/0:13,0:13:39.13:0,39,784	0/0:14,0:14:36.12:0,36,726	0/0:24,0:24:69.24:0,69,1387	0/0:23,0:23:63.20:0,63,1227	0/0:30,0:30:84.28:0,84,1652	0/0:18,0:18:51.16:0,51,994	0/0:2,0:2:5.89:0,6,76
chr10	21811172	.	CT	C	1202.66	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=8.663;DP=646;FS=0.000;HRun=1;HaplotypeScore=63.0216;InbreedingCoeff=0.9968;MQ=81.03;MQ0=0;MQRankSum=-0.571;QD=34.36;ReadPosRankSum=0.456;VQSLOD=3.2693;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,120,1909	0/0:8,0:8:24.08:0,24,383	0/0:25,0:25:72.17:0,72,1043	0/0:18,0:18:51.17:0,51,762	0/0:32,0:32:96.29:0,96,1462	0/0:20,0:20:60.20:0,60,958	0/0:25,0:25:75.21:0,75,1147	0/0:30,0:30:87.28:0,87,1350	0/0:19,0:19:57.16:0,57,859	0/0:32,0:32:96.33:0,96,1535	0/0:19,0:19:57.19:0,57,893	0/0:25,0:25:75.26:0,75,1197	0/0:26,0:26:78.23:0,78,1195	0/0:28,0:28:84.23:0,84,1248	1/1:0,35:35:93.31:1298,93,0	0/0:18,0:18:54.17:0,54,840	0/0:10,0:10:30.04:0,30,419	0/0:10,0:10:30.01:0,30,399	0/0:30,0:30:90.30:0,90,1399	0/0:23,0:23:66.20:0,66,1006	0/0:20,0:20:60.17:0,60,912	0/0:19,0:19:57.15:0,57,839	0/0:12,0:12:36.12:0,36,570	0/0:31,0:31:93.29:0,93,1438	0/0:23,0:23:69.22:0,69,1081	0/0:28,0:28:84.28:0,84,1321	0/0:25,0:25:75.24:0,75,1171	0/0:15,0:15:45.14:0,45,695
chr10	21833794	.	T	TTATA	7987.51	PASS	AC=46;AF=0.885;AN=52;BaseQRankSum=-0.836;DP=309;FS=13.045;HRun=0;HaplotypeScore=56.8433;InbreedingCoeff=0.5598;MQ=64.97;MQ0=1;MQRankSum=-3.967;QD=31.08;ReadPosRankSum=-1.171;VQSLOD=3.2787;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:51.15:0,51,847	1/1:2,5:7:12.04:301,12,0	0/0:9,0:8:2.12:0,2,64	./.	1/1:4,0:10:5.99:75,6,0	1/1:5,0:11:9.03:158,9,0	1/1:2,0:2:5.99:49,6,0	1/1:14,13:32:53.61:1005,54,0	1/1:3,0:3:2.99:24,3,0	1/1:5,0:9:9.02:131,9,0	1/1:3,1:9:9.03:158,9,0	1/1:4,0:7:6.02:106,6,0	1/1:1,0:7:15.05:262,15,0	1/1:1,0:6:3.01:53,3,0	0/0:15,0:16:42.14:0,42,697	1/1:7,6:15:15.05:378,15,0	1/1:1,15:17:39.13:981,39,0	1/1:3,18:23:47.95:1107,48,0	1/1:9,10:21:36.09:777,36,0	1/1:2,13:15:33.11:792,33,0	1/1:1,5:7:15.05:377,15,0	1/1:1,0:2:3.01:53,3,0	1/1:3,0:6:6.02:106,6,0	./.	1/1:6,0:13:18.06:317,18,0	1/1:7,1:16:27.08:469,27,0	1/1:8,2:17:12.04:256,12,0	1/1:1,0:2:3.01:53,3,0
chr10	21834530	.	T	TAAAA	33897.62	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-9.539;DP=589;FS=2.184;HRun=3;HaplotypeScore=80.3812;InbreedingCoeff=0.9783;MQ=89.08;MQ0=6;MQRankSum=-9.114;QD=66.47;ReadPosRankSum=4.082;VQSLOD=4.6130;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:27.09:0,27,477	1/1:0,7:6:8.87:243,9,0	0/0:27,0:27:69:0,69,1129	0/0:23,0:23:60.10:0,60,931	1/1:2,34:36:99:2393,99,0	1/1:0,25:28:72.25:1944,72,0	1/1:0,11:11:30.10:784,30,0	1/1:5,25:33:90.26:2103,90,0	1/1:1,14:16:30.10:810,30,0	1/1:1,28:31:90.28:2216,90,0	1/1:3,22:27:81.17:1873,81,0	1/1:0,10:10:24.08:647,24,0	1/1:1,23:23:66.23:1743,66,0	1/1:2,20:22:51.18:1377,51,0	0/0:17,0:17:51.14:0,51,852	1/1:3,28:31:84.29:2206,84,0	1/1:1,21:22:54.19:1443,54,0	1/1:1,11:11:30.10:809,30,0	1/1:4,22:27:78.20:1892,78,0	1/1:5,34:38:99:2497,99,0	1/1:0,6:6:18.06:486,18,0	1/1:3,22:25:66.18:1653,66,0	1/1:1,15:16:48.16:1250,48,0	1/1:2,9:12:21.07:567,21,0	1/1:0,12:13:36.12:971,36,0	1/1:3,18:21:60.21:1521,60,0	1/1:3,26:30:69.24:1822,69,0	1/1:0,8:8:24.08:648,24,0
chr10	21835774	.	A	AT	14645.26	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-8.050;DP=540;FS=0.522;HRun=7;HaplotypeScore=53.9902;InbreedingCoeff=0.9769;MQ=66.32;MQ0=1;MQRankSum=-0.547;QD=30.70;ReadPosRankSum=0.644;VQSLOD=5.0623;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:84.13:0,84,811	1/1:0,5:5:15.05:181,15,0	0/0:6,0:6:11.97:0,12,105	0/0:10,0:8:17.95:0,18,153	1/1:6,29:35:90.19:1048,90,0	1/1:3,22:25:63.19:752,63,0	1/1:1,7:8:14.94:213,15,0	1/1:4,30:34:90.28:1086,90,0	1/1:3,10:13:27.08:326,27,0	1/1:4,25:30:81.23:960,81,0	1/1:2,18:20:54.17:652,54,0	1/1:1,19:20:48.15:580,48,0	1/1:1,16:17:45:543,45,0	1/1:3,14:17:42.13:507,42,0	0/0:17,0:17:48.05:0,48,458	1/1:3,15:18:42.13:507,42,0	1/1:1,20:21:57.17:689,57,0	1/1:3,11:14:29.37:361,29,0	1/1:4,18:22:57.16:674,57,0	1/1:4,21:25:60.14:709,60,0	1/1:0,7:7:18.06:217,18,0	1/1:2,11:13:30.09:362,30,0	1/1:4,16:20:48.15:580,48,0	1/1:1,9:10:27.08:326,27,0	1/1:1,19:20:51.16:616,51,0	1/1:5,31:36:93.29:1123,93,0	1/1:0,21:21:60.18:725,60,0	1/1:0,26:26:75.23:906,75,0
chr10	21836597	.	T	TAG	32331.17	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-14.382;DP=701;FS=8.793;HRun=0;HaplotypeScore=75.9165;InbreedingCoeff=0.9998;MQ=90.31;MQ0=0;MQRankSum=-6.578;QD=56.52;ReadPosRankSum=3.779;VQSLOD=5.0033;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,108,1730	1/1:0,14:14:42.14:853,42,0	0/0:25,0:25:72.21:0,72,1079	0/0:29,0:29:56.24:0,56,1115	1/1:1,31:32:96.33:1915,96,0	1/1:2,27:29:78.27:1575,78,0	1/1:0,23:23:69.24:1402,69,0	1/1:2,27:31:93.29:1803,93,0	1/1:1,20:23:54.18:1097,54,0	1/1:1,24:25:72.23:1416,72,0	1/1:1,28:29:87.30:1754,87,0	1/1:0,22:22:66.23:1328,66,0	1/1:0,20:21:54.19:1097,54,0	1/1:0,27:28:81.28:1646,81,0	0/0:38,0:38:99:0,111,1812	1/1:1,41:42:99:2195,108,0	1/1:0,22:24:63.22:1280,63,0	1/1:0,12:13:36.12:725,36,0	1/1:1,13:13:42.14:832,42,0	1/1:0,30:30:90.31:1821,90,0	1/1:3,21:24:63.22:1280,63,0	1/1:2,18:22:60.21:1198,60,0	1/1:0,24:25:69.24:1379,69,0	1/1:1,25:26:72.25:1463,72,0	1/1:0,17:18:48.16:966,48,0	1/1:0,26:27:81.27:1611,81,0	1/1:0,20:20:54.19:1084,54,0	1/1:0,10:10:30.10:610,30,0
chr10	21837540	.	AGTGT	A	14754.29	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=10.619;DP=819;FS=1.369;HRun=0;HaplotypeScore=226.9227;InbreedingCoeff=0.9278;MQ=57.50;MQ0=12;MQRankSum=-4.772;QD=24.31;ReadPosRankSum=4.470;VQSLOD=4.1975;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:42:98.28:0,98,2167	1/1:6,10:17:21.07:352,21,0	0/0:65,0:29:48.16:0,48,997	0/0:57,0:22:21.24:0,21,686	1/1:5,27:33:54.18:906,54,0	1/1:7,20:27:21.07:352,21,0	1/1:8,16:24:21.07:352,21,0	1/1:14,18:33:57.11:785,57,0	1/1:2,19:21:36.12:604,36,0	1/1:11,20:31:57.15:870,57,0	1/1:8,10:18:3.01:50,3,0	1/1:8,18:26:27.09:453,27,0	1/1:9,23:32:48.16:803,48,0	1/1:4,30:35:60.20:977,60,0	0/0:45,1:46:62.79:0,63,2574	1/1:7,22:29:42.20:822,42,0	1/1:5,12:17:15.05:252,15,0	1/1:4,10:14:26.01:451,26,0	1/1:8,10:18:27.09:453,27,0	1/1:4,27:32:66.22:1085,66,0	1/1:7,16:24:27.09:453,27,0	1/1:8,17:26:35.96:597,36,0	1/1:2,21:24:23.42:541,23,0	1/1:8,14:22:9.03:151,9,0	1/1:5,22:27:45.15:755,45,0	1/1:8,26:35:84.17:1353,84,0	1/1:7,21:29:54.12:883,54,0	1/1:3,10:13:27.09:453,27,0
chr10	21837926	.	GA	G	7809.45	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=5.400;DP=425;FS=1.148;HRun=9;HaplotypeScore=95.2672;InbreedingCoeff=0.9513;MQ=61.90;MQ0=6;MQRankSum=-1.809;QD=23.04;ReadPosRankSum=2.107;VQSLOD=5.2495;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,108,1200	1/1:1,14:14:42.02:383,42,0	0/0:11,0:8:20.22:0,20,157	0/0:17,0:10:19.60:0,20,203	1/1:0,17:17:42.02:384,42,0	1/1:0,11:11:30.01:273,30,0	1/1:3,8:9:27.01:244,27,0	1/1:3,18:20:54:487,54,0	1/1:1,11:12:33.02:301,33,0	1/1:1,17:18:51.03:466,51,0	1/1:3,18:21:51.03:465,51,0	1/1:0,6:6:18.01:165,18,0	1/1:1,13:14:39.02:356,39,0	1/1:3,12:15:30:274,30,0	0/0:17,0:17:42.06:0,42,457	1/1:3,7:10:20.96:183,21,0	1/1:4,26:30:69.03:631,69,0	1/1:4,10:14:12.35:254,12,0	1/1:2,11:12:32.76:287,33,0	1/1:2,16:18:42.02:384,42,0	1/1:2,2:3:6:55,6,0	1/1:0,11:11:33.02:302,33,0	1/1:0,16:16:45.02:411,45,0	1/1:0,6:6:15.01:137,15,0	1/1:2,13:15:39.02:356,39,0	1/1:1,17:18:51.01:461,51,0	1/1:3,13:16:39.01:356,39,0	1/1:0,7:7:21.01:191,21,0
chr10	21838001	.	C	CCTCTGGAACATTTTTTTGTA	19853.20	PASS	AB=0.700;AC=55;AF=0.982;AN=56;BaseQRankSum=1.146;DP=180;FS=6.634;HRun=0;HaplotypeScore=220.3472;InbreedingCoeff=-0.0671;MQ=75.86;MQ0=0;MQRankSum=-1.732;QD=110.30;ReadPosRankSum=1.279;VQSLOD=4.0030;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,0:12:24.07:959,24,0	1/1:10,0:10:24.08:1217,24,0	1/1:2,0:5:15.05:936,15,0	0/1:4,1:7:13.36:949,0,13	1/1:8,0:8:14.91:686,15,0	1/1:6,0:6:12.04:716,12,0	1/1:3,0:3:9.03:280,9,0	1/1:5,0:5:12.04:786,12,0	1/1:7,0:7:15.05:890,15,0	1/1:11,0:11:30.10:1496,30,0	1/1:10,0:10:21.07:1146,21,0	1/1:4,0:4:3.01:138,3,0	1/1:4,0:4:8.97:311,9,0	1/1:5,0:5:9.03:563,9,0	1/1:6,0:6:9.03:696,9,0	1/1:2,0:2:3.01:91,3,0	1/1:7,0:7:15.05:519,15,0	1/1:2,0:2:6.02:331,6,0	1/1:3,0:2:6.02:323,6,0	1/1:11,0:11:12.04:388,12,0	1/1:2,0:2:6.02:239,6,0	1/1:5,0:5:6.02:362,6,0	1/1:12,0:12:23.95:1183,24,0	1/1:3,0:3:9.03:507,9,0	1/1:7,0:7:18.06:972,18,0	1/1:9,0:9:21.07:1039,21,0	1/1:12,0:12:30.10:1793,30,0	1/1:2,0:2:6.02:335,6,0
chr10	21841657	.	CT	C	1386.31	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=4.160;DP=614;FS=0.000;HRun=2;HaplotypeScore=78.2991;InbreedingCoeff=0.9992;MQ=83.33;MQ0=0;MQRankSum=0.234;QD=31.51;ReadPosRankSum=-0.492;VQSLOD=3.0773;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:51.17:0,51,763	0/0:10,0:10:26.69:0,27,404	0/0:26,1:26:53:0,53,978	0/0:25,0:25:72.24:0,72,1048	1/1:0,21:21:60.19:751,60,0	0/0:18,0:18:54.15:0,54,776	0/0:27,0:27:81.27:0,81,1213	0/0:29,0:29:87.29:0,87,1283	0/0:25,0:25:75.21:0,75,1079	0/0:25,0:25:72.16:0,72,1050	0/0:24,0:24:69.23:0,69,1028	0/0:21,0:21:57.16:0,57,829	0/0:23,0:23:69.19:0,69,999	0/0:29,0:29:87.17:0,87,1226	0/0:40,0:40:99:0,120,1745	0/0:30,0:30:84.28:0,84,1254	0/0:16,0:16:48.16:0,48,708	0/0:13,0:13:39.12:0,39,560	0/0:12,0:12:36.11:0,36,504	0/0:27,0:27:75.25:0,75,1117	0/0:13,0:13:33.11:0,33,494	1/1:1,22:23:60.19:757,60,0	0/0:17,0:17:51.13:0,51,731	0/0:21,0:21:60.20:0,60,875	0/0:18,0:18:54.06:0,54,734	0/0:27,0:27:78.26:0,78,1169	0/0:17,0:16:51.17:0,51,763	0/0:17,0:17:51.17:0,51,764
chr10	21844118	.	A	AC	1294.57	PASS	AB=1.000;AC=51;AF=0.944;AN=54;BaseQRankSum=2.241;DP=119;FS=9.515;HRun=2;HaplotypeScore=153.1631;InbreedingCoeff=0.2351;MQ=59.68;MQ0=0;MQRankSum=-2.610;QD=11.16;ReadPosRankSum=2.241;VQSLOD=1.4486;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,1:1:2.60:10,3,0	1/1:0,4:4:11.08:50,11,0	0/0:3,0:3:4.90:0,5,18	0/1:3,0:3:2.91:16,0,3	1/1:0,4:4:7.84:31,8,0	1/1:0,2:2:5.64:27,6,0	1/1:0,5:5:13.91:63,14,0	./.	1/1:0,3:4:7.01:28,7,0	1/1:0,5:5:14.31:79,14,0	1/1:0,5:5:13.44:55,13,0	1/1:0,6:6:9.37:44,9,0	1/1:0,5:5:13.64:62,14,0	1/1:0,2:2:5.29:22,5,0	1/1:0,8:8:21.74:94,22,0	1/1:0,3:3:8.38:39,8,0	1/1:0,2:2:5.54:25,6,0	1/1:1,2:3:5.21:29,5,0	1/1:0,2:2:5.93:40,6,0	1/1:1,6:7:19.40:88,19,0	1/1:0,1:1:2.74:12,3,0	1/1:0,2:2:5.19:20,5,0	1/1:0,7:7:18.96:80,19,0	1/1:0,5:5:13.68:60,14,0	1/1:0,12:12:32.92:143,33,0	1/1:0,6:6:17.43:99,17,0	1/1:0,8:8:22.58:115,23,0	1/1:0,4:4:11.33:56,11,0
chr10	21844122	.	CA	C	3795.89	PASS	AC=50;AF=0.926;AN=54;BaseQRankSum=2.406;DP=118;FS=6.543;HRun=2;HaplotypeScore=144.1298;InbreedingCoeff=0.3676;MQ=50.03;MQ0=0;MQRankSum=-2.406;QD=33.59;ReadPosRankSum=2.384;VQSLOD=2.7226;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,1:1:3.01:35,3,0	1/1:0,4:4:12.03:137,12,0	0/0:3,0:3:3.01:0,3,32	0/0:2,0:2:1.56:0,2,7	1/1:0,4:4:9.02:101,9,0	1/1:0,2:2:6.02:72,6,0	1/1:0,5:5:15.04:173,15,0	./.	1/1:1,3:4:12.04:149,12,0	1/1:0,5:5:15.04:180,15,0	1/1:0,5:5:15.04:161,15,0	1/1:0,6:6:12.03:140,12,0	1/1:0,5:5:15.04:172,15,0	1/1:0,2:2:6.02:69,6,0	1/1:0,8:8:24.06:266,24,0	1/1:0,3:3:9.03:106,9,0	1/1:0,2:2:6.02:71,6,0	1/1:0,3:3:9.03:113,9,0	1/1:0,2:2:6.02:72,6,0	1/1:0,7:7:21.05:224,21,0	1/1:0,1:1:3.01:36,3,0	1/1:0,2:2:6.02:68,6,0	1/1:0,7:7:21.06:232,21,0	1/1:0,5:5:15.04:173,15,0	1/1:0,12:12:36.10:403,36,0	1/1:0,6:6:18.05:217,18,0	1/1:0,8:8:24.07:285,24,0	1/1:0,4:4:12.04:141,12,0
chr10	21844133	.	CCACCGCTTATAA	C	2633.19	PASS	AB=0.950;AC=34;AF=0.850;AN=40;BaseQRankSum=0.880;DP=120;FS=12.991;HRun=0;HaplotypeScore=166.3723;InbreedingCoeff=0.2667;MQ=48.99;MQ0=0;MQRankSum=-1.052;QD=33.33;ReadPosRankSum=1.880;VQSLOD=2.6587;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:6,0:3:9.03:0,9,157	0/1:1,0:1:0:0,0,0	./.	1/1:2,0:2:5.87:40,6,0	1/1:4,1:5:3.01:103,3,0	./.	1/1:4,0:4:8.75:76,9,0	1/1:3,2:5:15.05:386,15,0	./.	1/1:5,1:6:4.83:65,5,0	1/1:5,0:5:8.25:42,8,0	1/1:1,1:2:2.97:20,3,0	1/1:7,1:8:5.95:124,6,0	1/1:3,0:3:3.01:111,3,0	1/1:2,0:2:3.01:58,3,0	1/1:3,0:3:6.02:146,6,0	1/1:2,0:2:6.02:211,6,0	0/1:7,0:7:0:0,0,0	0/1:1,0:1:0:0,0,0	./.	./.	1/1:5,0:5:4.87:16,5,0	./.	1/1:4,2:6:18.06:620,18,0	0/1:6,2:8:10.92:271,0,11	1/1:2,2:4:12.04:443,12,0
chr10	21844134	.	CACCGCTTATAACAGCG	C	2687.51	PASS	AB=0.819;AC=26;AF=0.650;AN=40;BaseQRankSum=-1.354;DP=121;FS=1.256;HRun=0;HaplotypeScore=175.0732;InbreedingCoeff=0.3127;MQ=53.97;MQ0=0;MQRankSum=-0.757;QD=40.72;ReadPosRankSum=-1.311;VQSLOD=3.1324;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:6,0:4:12.04:0,12,301	0/0:1,0:1:0.89:0,1,2	./.	1/1:2,0:2:1.77:7,2,0	1/1:2,3:5:3.01:141,3,0	./.	1/1:4,0:4:1.92:27,2,0	1/1:5,0:5:15.05:379,15,0	./.	0/1:6,0:6:5.75:55,0,6	0/0:4,1:5:1.85:0,2,7	0/0:2,0:2:1.25:0,1,3	1/1:4,4:8:6.02:199,6,0	1/1:3,0:3:3.01:128,3,0	1/1:2,0:2:3.01:52,3,0	1/1:1,2:3:6.02:176,6,0	1/1:1,1:2:6.02:274,6,0	0/1:5,2:7:0:0,0,0	0/1:0,1:1:0:0,0,0	./.	./.	0/0:5,0:5:5.09:0,5,19	./.	1/1:4,2:6:18.06:662,18,0	0/1:8,0:8:55.75:221,0,56	1/1:4,0:4:12.04:481,12,0
chr10	21844579	.	AGTGTGTGTGTGTGT	A	2919.07	PASS	AB=0.810;AC=12;AF=0.222;AN=54;BaseQRankSum=5.646;DP=626;FS=5.887;HRun=0;HaplotypeScore=212.9323;InbreedingCoeff=0.6306;MQ=66.57;MQ0=6;MQRankSum=-6.571;QD=20.41;ReadPosRankSum=0.283;VQSLOD=2.3167;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:34:21.45:0,21,1246	./.	0/0:35,0:26:18.05:0,18,453	0/0:29,0:19:6.02:0,6,108	0/0:14,0:19:18.02:0,18,603	0/0:19,0:29:12.93:0,13,657	0/0:15,0:23:27.09:0,27,1683	1/1:17,0:16:11.93:121,12,0	0/0:16,0:24:20.10:0,20,1124	0/0:17,0:28:54.18:0,54,2792	0/0:6,0:11:3.01:0,3,183	0/0:25,0:40:36.56:0,37,1685	0/0:18,0:30:36.11:0,36,1635	0/0:19,0:26:27.96:0,28,1425	0/0:21,0:21:15.89:0,16,545	1/1:14,23:39:47.94:1825,48,0	1/1:7,2:9:6.02:188,6,0	0/1:13,7:19:99:335,0,122	0/1:19,3:22:11.24:147,0,11	1/1:7,8:16:12.04:442,12,0	1/1:19,0:17:2.99:24,3,0	0/0:14,0:24:21.05:0,21,1148	0/0:4,0:9:15.51:0,16,754	0/0:19,0:31:36.10:0,36,1843	0/0:17,0:17:24.07:0,24,1310	0/0:25,0:24:42.12:0,42,2011	0/0:15,0:14:14.08:0,14,587	0/0:7,0:7:6.02:0,6,216
chr10	21848804	.	CA	C	9871.26	PASS	AC=50;AF=0.962;AN=52;DP=265;FS=0.000;HRun=1;HaplotypeScore=305.2860;InbreedingCoeff=0.4169;MQ=32.44;MQ0=0;QD=37.39;VQSLOD=3.5601;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,19:19:42.14:586,42,0	1/1:0,4:4:12.04:167,12,0	./.	0/0:1,0:1:0:0,0,0	1/1:0,14:14:39.13:544,39,0	1/1:0,8:8:18.06:251,18,0	1/1:0,7:7:18.06:251,18,0	1/1:0,11:11:27.09:377,27,0	1/1:0,13:13:36.12:502,36,0	1/1:0,14:14:42.14:587,42,0	1/1:0,10:10:24.08:335,24,0	1/1:0,9:9:27.09:377,27,0	1/1:0,9:9:27.09:369,27,0	1/1:0,17:17:48.16:670,48,0	1/1:0,10:10:30.10:419,30,0	1/1:0,15:15:39.13:544,39,0	1/1:0,11:11:30.10:419,30,0	1/1:0,3:3:6.02:84,6,0	1/1:0,8:8:21.07:293,21,0	1/1:0,13:13:39.13:544,39,0	1/1:0,6:6:6.02:84,6,0	1/1:0,6:6:18.06:251,18,0	1/1:0,11:11:33.11:460,33,0	1/1:0,7:7:18.06:251,18,0	1/1:0,15:15:36.12:502,36,0	1/1:0,12:12:36.12:503,36,0	1/1:0,12:12:36.12:502,36,0	./.
chr10	21848839	.	GT	G	3661.66	PASS	AB=1.000;AC=46;AF=0.885;AN=52;BaseQRankSum=-4.725;DP=272;FS=0.000;HRun=1;HaplotypeScore=380.9649;InbreedingCoeff=0.2811;MQ=35.59;MQ0=0;MQRankSum=-0.201;QD=13.87;ReadPosRankSum=5.265;VQSLOD=2.1891;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:11:15.08:105,15,0	1/1:5,0:5:11.97:95,12,0	./.	0/0:1,0:2:3.01:0,3,30	1/1:21,0:21:22.29:206,22,0	1/1:8,0:8:18.18:132,18,0	1/1:4,0:4:5.99:48,6,0	0/1:18,0:18:0.58:192,0,1	1/1:13,0:13:35.91:286,36,0	1/1:14,0:14:24.82:238,25,0	1/1:13,0:13:16.35:162,16,0	1/1:5,0:5:14.96:119,15,0	1/1:13,0:13:29.60:211,30,0	1/1:13,0:13:29.61:226,30,0	1/1:0,12:12:19.28:261,19,0	1/1:13,0:13:11.83:152,12,0	1/1:8,0:8:11.95:92,12,0	1/1:5,0:5:1.83:21,2,0	1/1:8,0:8:8.91:61,9,0	1/1:15,0:15:21.03:219,21,0	./.	1/1:7,0:7:4.37:84,4,0	1/1:11,0:11:19.96:165,20,0	1/1:5,0:5:3:25,3,0	1/1:13,0:13:27.56:276,28,0	0/1:14,0:14:5.64:126,0,6	1/1:15,0:15:15.19:161,15,0	0/0:3,0:3:0.22:0,0,1
chr10	21848840	.	TA	T	6569.58	PASS	AC=50;AF=0.962;AN=52;BaseQRankSum=-5.251;DP=263;FS=0.000;HRun=1;HaplotypeScore=361.2426;InbreedingCoeff=0.4053;MQ=35.79;MQ0=0;MQRankSum=0.931;QD=25.46;ReadPosRankSum=4.969;VQSLOD=3.2079;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,11:11:15.15:176,15,0	1/1:0,5:5:12.04:167,12,0	./.	0/0:2,0:2:3.01:0,3,30	1/1:0,20:20:24.13:351,24,0	1/1:0,8:8:18.32:223,18,0	1/1:0,3:3:6.02:84,6,0	1/1:0,16:16:36.12:486,36,0	1/1:0,13:13:36.12:502,36,0	1/1:0,14:14:25.24:489,25,0	1/1:0,13:13:18.02:289,18,0	1/1:0,5:5:15.05:209,15,0	1/1:0,13:13:31.97:379,32,0	1/1:0,12:12:32.14:394,32,0	1/1:12,0:12:9.80:131,10,0	1/1:0,12:12:21.16:296,21,0	1/1:0,7:7:12.04:167,12,0	1/1:0,5:5:4.84:60,5,0	1/1:0,8:8:9.03:126,9,0	1/1:0,15:15:33.52:443,34,0	./.	1/1:0,7:7:4.45:156,4,0	1/1:0,11:11:23.19:277,23,0	1/1:0,5:5:3.01:42,3,0	1/1:0,13:13:27.76:491,28,0	1/1:0,13:13:21.46:318,21,0	1/1:0,14:14:15.74:310,16,0	1/1:0,3:3:1.14:3,1,0
chr10	21848848	.	AT	A	5839.39	PASS	AC=50;AF=1.000;AN=50;BaseQRankSum=-5.352;DP=245;FS=0.000;HRun=1;HaplotypeScore=351.0724;InbreedingCoeff=0.1706;MQ=36.29;MQ0=0;MQRankSum=-0.347;QD=24.23;ReadPosRankSum=1.918;VQSLOD=3.3967;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,9:9:14.73:156,15,0	1/1:0,5:5:12.04:153,12,0	./.	./.	1/1:1,16:17:22.98:320,23,0	1/1:0,8:8:18.32:208,18,0	1/1:0,3:3:6.02:78,6,0	1/1:0,13:13:33.10:411,33,0	1/1:0,14:14:38.71:462,39,0	1/1:0,12:12:19.21:375,19,0	1/1:0,14:14:17.83:256,18,0	1/1:0,6:6:11.43:150,11,0	1/1:1,12:13:31.39:338,31,0	1/1:0,13:13:31.58:351,32,0	1/1:0,9:9:18.13:231,18,0	1/1:0,10:10:22.97:275,23,0	1/1:0,7:7:12.04:152,12,0	1/1:0,4:4:1.87:34,2,0	1/1:0,8:8:9.02:117,9,0	1/1:0,14:14:32.64:400,33,0	./.	1/1:0,7:7:4.61:141,5,0	1/1:0,11:11:21.04:240,21,0	1/1:0,5:5:3.01:35,3,0	1/1:0,13:13:34.31:452,34,0	1/1:0,12:12:17.62:252,18,0	1/1:0,11:11:14.54:251,15,0	1/1:0,3:3:0.47:2,0,0
chr10	21848856	.	GC	G	2445.47	PASS	AC=44;AF=0.917;AN=48;BaseQRankSum=-6.167;DP=182;FS=0.000;HRun=1;HaplotypeScore=294.0396;InbreedingCoeff=0.2191;MQ=38.65;MQ0=0;MQRankSum=1.285;QD=14.14;ReadPosRankSum=-1.599;VQSLOD=2.3076;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,5:5:11.15:73,11,0	1/1:0,4:4:8.98:73,9,0	./.	./.	1/1:0,14:14:19.09:177,19,0	1/1:0,8:8:18.18:134,18,0	1/1:0,1:1:2.99:24,3,0	1/1:0,9:9:23.97:205,24,0	1/1:0,10:10:26.54:203,27,0	1/1:0,8:8:7.13:151,7,0	1/1:0,11:11:8.23:95,8,0	1/1:0,4:4:5.62:50,6,0	1/1:0,9:9:17.72:121,18,0	1/1:0,9:9:17.64:130,18,0	1/1:0,7:7:3.72:84,4,0	1/1:0,8:8:8.99:117,9,0	1/1:0,4:4:5.99:49,6,0	0/0:0,3:3:0.32:0,0,1	1/1:0,5:5:2.96:27,3,0	1/1:0,12:12:16.68:183,17,0	./.	1/1:0,6:6:2.26:62,2,0	1/1:0,8:8:10.50:87,11,0	./.	1/1:0,10:10:25.14:215,25,0	1/1:0,11:11:7.91:132,8,0	1/1:0,10:10:11.15:131,11,0	0/0:0,2:2:0.03:0,0,0
chr10	21848858	.	AT	A	2221.79	PASS	AC=44;AF=0.917;AN=48;BaseQRankSum=-6.151;DP=181;FS=0.000;HRun=1;HaplotypeScore=294.0352;InbreedingCoeff=0.2087;MQ=33.85;MQ0=0;MQRankSum=-0.100;QD=12.84;ReadPosRankSum=-2.054;VQSLOD=1.8144;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,5:5:11.09:67,11,0	1/1:0,4:4:8.95:67,9,0	./.	./.	1/1:1,13:14:19.01:164,19,0	1/1:0,8:8:18.14:124,18,0	1/1:0,1:1:2.98:22,3,0	1/1:0,9:9:23.87:184,24,0	1/1:0,10:10:26.47:187,26,0	1/1:0,8:8:7.11:139,7,0	1/1:0,11:11:8.61:79,9,0	1/1:0,4:4:5.60:46,6,0	1/1:0,9:9:17.50:110,18,0	1/1:0,9:9:17.59:121,18,0	1/1:0,7:7:2.48:76,2,0	1/1:0,8:8:8.40:107,8,0	1/1:0,4:4:5.97:45,6,0	0/0:0,3:3:0.32:0,0,1	1/1:0,5:5:2.99:25,3,0	1/1:0,12:12:14.17:165,14,0	./.	1/1:0,6:6:2.23:56,2,0	1/1:0,8:8:10.41:83,10,0	./.	1/1:0,10:10:25.05:197,25,0	1/1:0,11:11:6.72:118,7,0	1/1:0,10:10:10.92:119,11,0	0/0:0,2:2:0.03:0,0,0
chr10	21848873	.	TC	T	2075.90	PASS	AB=0.571;AC=43;AF=0.896;AN=48;BaseQRankSum=-2.613;DP=193;FS=0.000;HRun=1;HaplotypeScore=301.3493;InbreedingCoeff=0.2238;MQ=33.44;MQ0=0;MQRankSum=0.087;QD=11.34;ReadPosRankSum=-3.579;VQSLOD=0.5396;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,4:6:12.98:88,13,0	1/1:1,4:5:9.04:48,9,0	./.	./.	1/1:2,12:14:20.69:154,21,0	1/1:1,8:9:15.18:113,15,0	1/1:0,2:2:5.38:47,5,0	1/1:5,2:7:1.31:51,1,0	1/1:2,8:10:25.57:234,26,0	0/1:2,6:8:1.86:51,0,2	1/1:0,11:11:7.20:53,7,0	1/1:1,3:4:5.57:42,6,0	1/1:2,8:10:16.69:101,17,0	1/1:3,6:9:16.11:96,16,0	1/1:2,6:8:11.99:106,12,0	1/1:1,7:8:12.63:108,13,0	1/1:2,1:3:5.91:38,6,0	0/0:0,2:2:0.32:0,0,1	1/1:2,4:6:6.02:74,6,0	1/1:2,11:13:26.73:171,27,0	./.	1/1:2,7:9:9.29:100,9,0	1/1:2,6:8:11.92:66,12,0	./.	1/1:0,11:11:25.98:153,26,0	1/1:2,8:10:11.16:135,11,0	1/1:3,9:12:9.46:127,9,0	0/0:0,5:5:0.13:0,0,2
chr10	21848906	.	TC	T	402.76	PASS	AB=0.500;AC=30;AF=0.682;AN=44;BaseQRankSum=-3.006;DP=132;FS=0.000;HRun=1;HaplotypeScore=223.3306;InbreedingCoeff=0.1216;MQ=35.56;MQ0=0;MQRankSum=-1.509;QD=3.36;ReadPosRankSum=0.518;VQSLOD=-0.3946;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,3:3:4.38:40,4,0	0/1:0,4:4:0.69:1,0,1	./.	./.	0/1:0,12:12:2.05:38,0,2	1/1:0,6:6:3.22:13,3,0	0/0:0,1:1:0.47:0,0,1	./.	1/1:0,3:3:1.58:8,2,0	1/1:0,11:11:4.14:92,4,0	0/1:0,13:13:0.26:61,0,0	1/1:0,3:3:2.43:15,2,0	1/1:0,8:8:11.37:65,11,0	1/1:0,3:3:2.68:11,3,0	0/0:0,5:5:3.84:0,4,11	0/1:0,4:4:1.78:2,0,7	./.	1/1:0,3:3:1.81:17,2,0	1/1:0,2:2:3.01:31,3,0	1/1:0,10:10:2.44:32,2,0	./.	0/1:0,7:7:3.10:18,0,3	1/1:1,7:8:5.39:47,5,0	./.	0/1:0,6:6:0.17:0,0,1	0/1:0,7:7:5.59:6,0,6	0/1:0,7:7:2.94:6,0,3	0/0:0,5:5:0.81:0,1,3
chr10	21848917	.	AATTG	A	147.32	PASS	AB=1.000;AC=26;AF=0.619;AN=42;BaseQRankSum=2.136;DP=145;FS=0.000;HRun=0;HaplotypeScore=259.4158;InbreedingCoeff=0.0062;MQ=35.03;MQ0=0;MQRankSum=1.175;QD=1.15;ReadPosRankSum=-1.358;VQSLOD=2.2169;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:3,0:3:9.37:10,0,9	1/1:6,0:6:6.07:16,6,0	./.	./.	0/1:17,0:17:13.21:33,0,13	0/0:6,0:6:0:0,0,0	./.	./.	0/0:3,0:3:1.33:0,1,14	0/1:15,0:15:21.13:27,0,21	0/1:14,0:14:6.73:7,0,60	1/1:3,0:3:1.41:4,1,0	0/1:8,0:8:6.29:6,0,15	0/0:3,0:3:1.25:0,1,3	0/1:5,0:5:5.06:5,0,11	0/1:4,0:4:5.64:6,0,14	./.	1/1:3,0:3:5.66:27,6,0	0/0:3,0:3:5.01:0,5,27	1/1:15,0:15:0.28:25,0,0	./.	1/1:8,0:8:3.13:7,3,0	0/1:10,0:10:0.22:0,0,43	./.	1/1:6,0:6:3.46:9,3,0	1/1:0,2:2:2.92:27,3,0	1/1:0,5:5:10.19:45,10,0	1/1:0,4:4:2.76:8,3,0
chr10	21848924	.	ATGAC	A	531.89	PASS	AB=0.500;AC=29;AF=0.690;AN=42;BaseQRankSum=-0.334;DP=120;FS=6.990;HRun=0;HaplotypeScore=208.3286;InbreedingCoeff=0.3640;MQ=36.22;MQ0=0;MQRankSum=1.197;QD=5.21;ReadPosRankSum=0.236;VQSLOD=1.8521;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:0,3:3:4.09:17,4,0	1/1:0,6:6:6.07:16,6,0	./.	0/0:1,0:1:3.01:0,3,73	1/1:0,14:14:11.52:44,12,0	0/0:0,5:5:0:0,0,0	./.	./.	0/0:0,3:3:1.33:0,1,14	1/1:0,14:14:18.68:246,19,0	1/1:0,12:12:10.64:27,11,0	0/0:0,2:2:2.60:0,3,10	1/1:0,6:6:0.94:11,1,0	0/0:0,2:2:1.25:0,1,3	./.	0/0:0,3:3:2.96:0,3,19	./.	1/1:0,3:3:6.43:45,6,0	1/1:0,1:1:3.01:62,3,0	1/1:0,12:12:9.82:47,10,0	./.	1/1:0,7:7:4.24:10,4,0	0/1:0,6:7:4.42:11,0,4	./.	1/1:0,6:6:3.46:9,3,0	1/1:0,0:2:2.93:37,3,0	1/1:0,0:5:10.57:56,11,0	1/1:0,0:4:2.76:8,3,0
chr10	21850311	.	CGT	C	1266.64	PASS	AB=0.852;AC=21;AF=0.420;AN=50;BaseQRankSum=0.214;DP=611;FS=3.021;HRun=0;HaplotypeScore=95.1422;InbreedingCoeff=0.4069;MQ=68.35;MQ0=9;MQRankSum=1.616;QD=4.66;ReadPosRankSum=2.209;VQSLOD=2.4075;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:36:3.35:0,3,258	0/0:10,0:10:2.99:0,3,23	./.	./.	1/1:13,8:21:9.02:98,9,0	1/1:11,1:18:11.68:93,12,0	0/1:24,9:32:20.71:205,0,21	0/0:21,0:20:19.83:0,20,127	0/0:22,0:22:2.38:0,2,55	1/1:13,3:16:13.21:86,13,0	1/1:8,1:12:5.85:47,6,0	0/1:16,1:17:29.74:87,0,30	1/1:13,6:20:11.41:111,11,0	1/1:16,8:27:20.72:191,21,0	0/1:23,1:26:10.80:11,0,339	0/0:10,0:21:6:0,6,53	0/0:27,0:31:28.78:0,29,241	0/0:20,0:18:17.97:0,18,171	0/0:14,0:14:18.98:0,19,145	./.	0/0:26,0:23:8.99:0,9,75	1/1:10,7:18:5.85:47,6,0	0/1:15,3:19:15.07:201,0,15	1/1:15,10:28:26.57:238,27,0	0/1:13,4:17:26.70:27,0,33	0/0:24,0:30:27.27:0,27,195	0/0:18,0:25:20.50:0,20,164	0/0:4,0:8:3:0,3,26
chr10	21850596	.	CT	C	4414.65	PASS	AB=0.659;AC=44;AF=0.786;AN=56;BaseQRankSum=3.024;DP=480;FS=2.179;HRun=13;HaplotypeScore=63.2037;InbreedingCoeff=0.1485;MQ=73.20;MQ0=0;MQRankSum=-1.676;QD=9.68;ReadPosRankSum=4.322;VQSLOD=4.2662;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:23,4:27:24.11:24,0,389	0/1:2,2:4:15.91:16,0,19	0/0:16,0:16:9.70:0,10,172	0/0:8,0:8:0.35:0,0,50	1/1:7,10:19:30.81:209,31,0	1/1:5,19:24:29.51:348,30,0	1/1:7,9:17:18.21:120,18,0	1/1:7,20:28:52.12:377,52,0	1/1:8,3:12:13.91:93,14,0	1/1:8,16:24:18.47:299,18,0	0/1:9,9:18:0.36:152,0,0	1/1:7,11:19:31.84:225,32,0	1/1:2,13:15:26.79:197,27,0	0/1:7,10:17:4.59:127,0,5	1/1:6,7:13:20.75:149,21,0	0/1:6,9:15:2.39:148,0,2	0/1:4,12:16:16.87:183,0,17	1/1:7,17:24:25.73:306,26,0	1/1:6,8:14:20.81:153,21,0	0/1:5,6:12:4.93:95,0,5	1/1:3,8:11:17.88:131,18,0	1/1:3,8:11:23.80:175,24,0	0/1:7,11:19:0.34:152,0,0	1/1:6,11:17:32.73:237,33,0	1/1:5,18:23:15.50:277,16,0	1/1:5,0:17:24.90:72,25,0	1/1:4,0:27:36.64:108,37,0	1/1:4,0:13:14.25:42,14,0
chr10	21851718	.	A	AC	2113.37	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=10.946;DP=676;FS=6.596;HRun=3;HaplotypeScore=67.5612;InbreedingCoeff=0.9983;MQ=80.18;MQ0=0;MQRankSum=-1.771;QD=35.22;ReadPosRankSum=-0.016;VQSLOD=4.0687;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:93.29:0,93,1115	0/0:12,0:12:33.10:0,33,396	0/0:25,0:25:66.15:0,66,763	0/0:22,0:22:20.83:0,21,624	0/0:33,0:33:99:0,99,1165	0/0:32,0:31:93.26:0,93,1094	0/0:30,0:30:78.19:0,78,899	0/0:37,0:37:99:0,99,1144	0/0:26,0:26:78.24:0,78,936	0/0:26,0:25:69.68:0,70,828	0/0:21,0:21:57.17:0,57,684	0/0:22,0:22:54.15:0,54,636	0/0:20,0:20:57.17:0,57,682	0/0:19,0:19:57.17:0,57,684	0/0:29,0:29:81.25:0,81,972	0/0:37,0:37:99:0,99,1179	0/0:21,0:21:63.16:0,63,739	0/0:14,0:14:39.10:0,39,456	0/0:15,0:15:45.12:0,45,517	0/0:29,0:29:78.24:0,78,935	0/0:29,0:29:78.22:0,78,923	0/0:20,0:20:60.16:0,60,697	0/0:17,0:17:51.16:0,51,612	0/0:29,0:27:81.25:0,81,972	0/0:19,0:19:54.14:0,54,625	1/1:0,21:21:63.14:823,63,0	1/1:5,19:25:66.17:857,66,0	1/1:0,14:14:42.14:577,42,0
chr10	21851812	.	A	AT	2122.83	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-10.124;DP=602;FS=13.188;HRun=8;HaplotypeScore=58.9212;InbreedingCoeff=0.9938;MQ=80.53;MQ0=0;MQRankSum=-1.090;QD=24.97;ReadPosRankSum=1.939;VQSLOD=3.5530;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:54.01:0,54,493	0/0:6,0:6:18.01:0,18,165	0/0:20,0:20:38.99:0,39,356	0/0:13,0:13:20.99:0,21,188	0/0:23,0:23:66.02:0,66,598	0/0:28,0:28:72.02:0,72,654	0/0:21,0:21:57.02:0,57,522	0/0:25,0:25:63:0,63,566	0/0:19,0:19:57.03:0,57,522	0/0:25,0:25:57.02:0,57,522	0/0:30,0:30:84.03:0,84,763	0/0:18,0:18:45:0,45,407	0/0:25,0:25:69.03:0,69,631	0/0:25,0:25:75.03:0,75,682	0/0:28,0:28:78.02:0,78,709	0/0:13,0:13:36.02:0,36,330	0/0:20,0:20:54.03:0,54,494	0/0:17,0:17:51.03:0,51,467	0/0:19,0:19:48.02:0,48,439	0/0:28,0:29:80.05:0,80,714	0/0:16,0:16:39.01:0,39,357	0/0:17,0:17:51.03:0,51,467	0/0:16,0:16:45:0,45,406	0/0:16,0:16:48.03:0,48,439	0/0:23,0:23:63.01:0,63,570	1/1:3,23:26:20.28:742,20,0	1/1:4,36:40:87.09:1004,87,0	1/1:4,15:18:45.13:519,45,0
chr10	21852192	.	TA	T	6544.57	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=9.568;DP=533;FS=9.798;HRun=1;HaplotypeScore=72.9154;InbreedingCoeff=0.9957;MQ=81.32;MQ0=0;MQRankSum=-2.015;QD=38.27;ReadPosRankSum=0.029;VQSLOD=4.7257;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:93.26:0,93,1285	1/1:0,8:8:24.08:334,24,0	0/0:15,0:16:41.96:0,42,510	0/0:20,2:22:30.88:0,31,413	0/0:32,0:32:93.28:0,93,1284	0/0:18,0:18:51.09:0,51,685	0/0:17,0:17:51.10:0,51,703	1/1:0,33:33:96.21:1218,96,0	1/1:3,14:17:43.98:632,44,0	0/0:22,0:22:66.22:0,66,928	0/0:19,0:19:57.16:0,57,793	0/0:14,0:14:42.13:0,42,579	0/0:18,0:18:54.16:0,54,753	0/0:19,0:19:57.16:0,57,778	0/0:22,0:22:66.17:0,66,872	1/1:0,21:21:60.20:833,60,0	1/1:0,29:29:78.22:1064,78,0	1/1:0,17:17:48.16:668,48,0	1/1:0,15:15:45.13:610,45,0	1/1:0,21:21:63.11:809,63,0	1/1:0,10:10:27.09:376,27,0	0/0:6,0:6:18.06:0,18,257	0/0:15,0:15:45.15:0,45,643	0/0:12,0:12:35.71:0,36,472	0/0:28,0:28:84.23:0,84,1145	0/0:27,0:27:81.24:0,81,1109	0/0:16,0:16:48.12:0,48,644	0/0:6,0:6:15.05:0,15,214
chr10	21852565	.	TC	T	25989.29	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=6.450;DP=783;FS=0.734;HRun=1;HaplotypeScore=80.7362;InbreedingCoeff=0.9994;MQ=85.40;MQ0=0;MQRankSum=-5.520;QD=39.80;ReadPosRankSum=5.583;VQSLOD=5.1245;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,35:35:99:1426,102,0	1/1:0,8:8:24.08:336,24,0	0/0:23,0:23:63.21:0,63,999	0/0:32,0:32:90.30:0,90,1399	1/1:0,26:26:78.26:1091,78,0	1/1:0,32:32:87.29:1217,87,0	1/1:0,29:29:78.26:1090,78,0	1/1:0,34:34:99:1391,102,0	1/1:0,35:35:96.32:1340,96,0	1/1:0,42:42:99:1744,126,0	1/1:0,11:11:30.10:419,30,0	1/1:0,38:38:99:1427,102,0	1/1:0,35:35:96.32:1342,96,0	1/1:0,29:29:84.28:1174,84,0	1/1:0,40:40:99:1469,105,0	1/1:0,39:39:99:1595,114,0	1/1:0,24:24:69.23:965,69,0	1/1:0,22:22:63.21:881,63,0	1/1:0,23:23:69.23:965,69,0	1/1:0,21:21:60.20:839,60,0	1/1:0,20:20:60.20:839,60,0	1/1:0,32:32:96.32:1336,96,0	1/1:0,32:32:90.30:1258,90,0	1/1:0,22:22:63.21:881,63,0	1/1:0,24:24:69.23:965,69,0	0/0:27,1:28:42.30:0,42,1232	0/0:33,0:33:99:0,99,1557	0/0:14,0:14:42.14:0,42,670
chr10	21853354	.	AAC	A	4352.36	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=11.708;DP=493;FS=0.000;HRun=0;HaplotypeScore=58.0566;InbreedingCoeff=0.9878;MQ=67.83;MQ0=2;MQRankSum=-0.525;QD=29.61;ReadPosRankSum=0.689;VQSLOD=5.6424;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:21.05:0,21,323	1/1:0,4:4:9.03:120,9,0	0/0:14,0:12:27:0,27,386	0/0:12,0:11:26.68:0,27,395	0/0:33,0:33:87.30:0,87,1481	0/0:27,0:27:69.24:0,69,1195	0/0:14,0:14:39.12:0,39,648	1/1:4,29:33:87.26:1127,87,0	1/1:0,10:10:24.08:320,24,0	0/0:27,0:27:78.22:0,78,1227	0/0:20,0:20:57.20:0,57,986	0/0:15,0:15:42.14:0,42,707	0/0:20,0:20:54.15:0,54,871	0/0:17,0:17:45.12:0,45,716	0/0:18,0:18:48.12:0,48,799	1/1:1,11:11:18.06:240,18,0	1/1:2,15:17:39.12:507,39,0	1/1:0,15:15:33.11:439,33,0	1/1:2,11:13:30.98:399,31,0	1/1:2,26:27:66.08:802,66,0	1/1:2,13:15:30.10:399,30,0	0/0:10,0:10:24.06:0,24,387	0/0:17,0:17:45.13:0,45,750	0/0:15,0:15:45.13:0,45,734	0/0:18,0:18:54.17:0,54,906	0/0:15,0:15:45.14:0,45,753	0/0:29,0:29:78.16:0,78,1314	0/0:15,0:15:39.13:0,39,668
chr10	21853603	.	GAC	G	1360.06	PASS	AB=0.970;AC=18;AF=0.321;AN=56;BaseQRankSum=10.414;DP=507;FS=25.475;HRun=0;HaplotypeScore=94.3313;InbreedingCoeff=0.2718;MQ=66.55;MQ0=2;MQRankSum=2.437;QD=4.98;ReadPosRankSum=10.867;VQSLOD=0.2240;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:45.03:0,45,653	0/0:9,0:9:24.01:0,24,410	0/0:19,0:19:14.95:0,15,363	0/1:15,0:13:9.99:10,0,172	1/1:16,1:17:0.14:120,0,0	1/1:29,0:28:32.03:160,32,0	1/1:28,0:28:0.45:105,0,0	0/0:18,0:18:47.99:0,48,523	0/0:21,0:21:60.15:0,60,986	0/1:21,3:24:13.73:198,0,14	0/1:14,0:14:16:92,0,16	0/1:28,1:29:17.65:196,0,18	1/1:25,0:25:55.84:220,56,0	0/1:20,1:21:6.01:113,0,6	0/0:21,0:20:60.13:0,60,1003	0/0:17,0:17:45.55:0,46,705	0/0:10,0:10:27.09:0,27,507	0/0:13,0:13:35.21:0,35,511	0/0:14,0:14:39.31:0,39,446	0/0:7,0:7:14.96:0,15,184	0/0:17,1:19:26.52:0,27,248	0/1:12,0:12:20.18:40,0,20	1/1:13,0:13:21.92:83,22,0	0/1:28,0:28:99:103,0,105	0/1:17,1:18:33.54:96,0,34	0/0:20,1:21:24.77:0,25,618	0/0:25,0:25:59.15:0,59,827	0/0:4,0:4:12.02:0,12,187
chr10	21853604	.	ACC	A	6554.18	PASS	AB=0.759;AC=27;AF=0.482;AN=56;BaseQRankSum=-2.358;DP=506;FS=18.613;HRun=11;HaplotypeScore=78.0599;InbreedingCoeff=0.7633;MQ=66.24;MQ0=2;MQRankSum=1.367;QD=21.28;ReadPosRankSum=7.631;VQSLOD=1.9613;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:15:29.57:0,30,403	0/0:9,0:9:21.06:0,21,288	0/1:14,2:18:49.24:49,0,53	0/1:13,1:13:33.77:34,0,113	1/1:1,16:17:30.18:432,30,0	1/1:0,28:27:69.17:734,69,0	1/1:2,25:28:62.89:651,63,0	0/0:16,0:17:23.40:0,23,253	0/0:20,0:21:53.43:0,53,672	1/1:6,18:24:63.14:666,63,0	1/1:2,11:13:33.06:351,33,0	1/1:4,24:29:71.90:745,72,0	1/1:0,25:25:69.17:734,69,0	1/1:3,17:21:56.87:587,57,0	0/0:22,0:21:47.89:0,48,682	0/0:17,0:17:40.78:0,41,464	0/0:11,0:11:27.08:0,27,382	0/0:13,0:13:9.50:0,9,300	0/0:12,0:13:26.42:0,26,310	0/0:8,0:9:11.40:0,11,141	0/1:5,1:19:5.69:6,0,77	1/1:2,10:12:24.05:255,24,0	1/1:0,13:13:27.07:287,27,0	1/1:7,21:28:57.12:607,57,0	1/1:4,14:18:39.09:415,39,0	0/0:19,0:20:4.43:0,4,371	0/0:26,0:26:39.06:0,39,533	0/0:4,0:5:11.53:0,12,147
chr10	21854358	.	AAAAAAC	A	11457.82	PASS	AB=1.000;AC=51;AF=0.911;AN=56;BaseQRankSum=-2.668;DP=592;FS=59.668;HRun=0;HaplotypeScore=174.0357;InbreedingCoeff=0.6681;MQ=65.21;MQ0=4;MQRankSum=-3.835;QD=21.18;ReadPosRankSum=6.204;VQSLOD=2.2636;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,23:33:47.65:876,48,0	1/1:14,0:14:27.05:261,27,0	0/0:28,0:20:43.09:0,43,637	0/0:23,0:16:27.47:0,27,703	1/1:3,24:27:74.45:1166,74,0	1/1:27,2:29:70.09:628,70,0	1/1:15,0:15:26.51:226,27,0	1/1:18,1:18:49.05:429,49,0	1/1:18,3:21:43.70:452,44,0	1/1:17,1:18:40.49:391,40,0	1/1:20,0:20:4.52:294,5,0	1/1:24,1:25:32.83:401,33,0	1/1:25,0:25:25.24:386,25,0	1/1:18,1:19:19.48:354,19,0	1/1:20,0:20:36.03:337,36,0	1/1:26,1:27:55.54:535,56,0	1/1:17,1:18:27.30:332,27,0	1/1:25,2:27:44.85:465,45,0	0/1:13,0:13:76.99:77,0,172	1/1:29,0:29:7.35:506,7,0	1/1:11,0:11:11.83:109,12,0	1/1:2,7:9:11.95:138,12,0	1/1:22,2:24:42.58:472,43,0	1/1:19,1:20:19.42:218,19,0	1/1:14,0:14:18.55:217,19,0	1/1:6,19:25:66.01:940,66,0	1/1:4,27:31:51.17:1060,51,0	1/1:1,7:8:9.03:187,9,0
chr10	21854359	.	AAAAAC	A	16810.15	PASS	AB=0.800;AC=51;AF=0.911;AN=56;BaseQRankSum=-5.883;DP=589;FS=11.633;HRun=0;HaplotypeScore=145.1347;InbreedingCoeff=0.7134;MQ=64.35;MQ0=4;MQRankSum=-2.201;QD=31.25;ReadPosRankSum=3.964;VQSLOD=3.7229;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:33,0:33:47.87:579,48,0	1/1:2,12:14:36.01:572,36,0	0/0:28,0:19:33.26:0,33,512	0/0:23,0:16:9.60:0,10,611	1/1:26,1:27:74.78:823,75,0	1/1:14,15:29:79.01:1169,79,0	1/1:1,14:15:27.07:474,27,0	1/1:2,17:19:54.01:780,54,0	1/1:6,15:21:44.66:707,45,0	1/1:2,16:18:42.12:730,42,0	1/1:10,10:20:49.84:703,50,0	1/1:13,11:24:57.09:822,57,0	1/1:14,11:25:66.57:856,67,0	1/1:13,7:20:41.17:676,41,0	1/1:8,12:20:41.77:705,42,0	1/1:6,21:27:57.15:973,57,0	1/1:6,12:18:37.87:550,38,0	1/1:10,17:27:58.31:842,58,0	0/1:9,3:12:99:204,0,127	1/1:15,14:29:71.46:1041,71,0	1/1:3,8:11:11.72:226,12,0	1/1:8,1:9:11.95:134,12,0	1/1:7,17:24:49.75:791,50,0	1/1:4,15:19:28.89:480,29,0	1/1:9,6:15:40.72:437,41,0	1/1:22,2:24:66:726,66,0	1/1:30,0:30:51.17:689,51,0	1/1:8,0:8:9.03:122,9,0
chr10	21854360	.	AAAAC	A	13288.07	PASS	AB=0.857;AC=51;AF=0.911;AN=56;BaseQRankSum=-4.674;DP=581;FS=11.633;HRun=0;HaplotypeScore=147.1498;InbreedingCoeff=0.7392;MQ=64.64;MQ0=4;MQRankSum=-2.700;QD=25.12;ReadPosRankSum=4.095;VQSLOD=4.2523;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:31,1:32:48.05:541,48,0	1/1:13,0:13:35.04:368,35,0	0/0:28,0:19:41.29:0,41,405	0/0:24,0:17:25.50:0,25,530	1/1:26,0:26:75.74:736,76,0	1/1:27,2:29:81.10:921,81,0	1/1:14,1:15:27.08:337,27,0	1/1:18,1:18:54:579,54,0	1/1:18,3:21:44.77:550,45,0	1/1:18,0:18:42.10:481,42,0	1/1:19,1:20:49.01:565,49,0	1/1:23,0:23:57.96:610,58,0	1/1:24,1:25:67.68:680,68,0	1/1:17,3:20:52.13:562,52,0	1/1:18,1:19:42.09:489,42,0	1/1:26,1:27:57.18:708,57,0	1/1:16,2:18:39.07:493,39,0	1/1:22,5:27:60.19:798,60,0	0/1:10,2:12:99:193,0,101	1/1:26,3:29:72.11:765,72,0	1/1:10,1:11:12.04:144,12,0	1/1:9,0:9:11.95:111,12,0	1/1:22,1:23:50.20:569,50,0	1/1:17,1:18:30.04:358,30,0	1/1:14,1:15:41.90:400,42,0	1/1:22,0:22:65.97:636,66,0	1/1:30,0:30:51.15:589,51,0	1/1:8,0:8:9.03:104,9,0
chr10	21854361	.	AAAC	A	11241.37	PASS	AB=1.000;AC=52;AF=0.929;AN=56;BaseQRankSum=-3.633;DP=580;FS=6.772;HRun=0;HaplotypeScore=145.4622;InbreedingCoeff=0.5231;MQ=65.45;MQ0=4;MQRankSum=-2.087;QD=20.22;ReadPosRankSum=3.348;VQSLOD=4.0940;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:32,0:32:47.99:445,48,0	1/1:13,0:13:33.86:312,34,0	0/1:29,0:20:4.46:4,0,252	0/0:24,0:17:27.82:0,28,410	1/1:26,0:26:77.76:660,78,0	1/1:28,0:28:80.83:757,81,0	1/1:15,0:15:27.06:271,27,0	1/1:19,0:18:53.95:493,54,0	1/1:21,0:21:44.89:441,45,0	1/1:18,0:18:42.02:402,42,0	1/1:20,0:20:50.33:463,50,0	1/1:23,0:23:59.40:543,59,0	1/1:25,0:25:71.31:632,71,0	1/1:21,0:21:58.08:530,58,0	1/1:19,0:19:41.99:398,42,0	1/1:27,0:27:57.11:571,57,0	1/1:16,2:18:39.09:411,39,0	1/1:26,1:27:59.71:588,60,0	0/1:12,0:12:73.68:161,0,74	1/1:29,0:29:74.67:662,75,0	1/1:10,1:11:12.02:121,12,0	1/1:8,0:8:11.94:96,12,0	1/1:23,0:23:50.75:468,51,0	1/1:17,1:18:29.92:317,30,0	1/1:14,0:14:40.94:342,41,0	1/1:22,0:22:65.89:578,66,0	1/1:30,0:30:51.08:489,51,0	1/1:8,0:8:9.01:86,9,0
chr10	21854363	.	AC	A	8125.02	PASS	AB=1.000;AC=52;AF=0.929;AN=56;BaseQRankSum=-1.821;DP=555;FS=4.293;HRun=1;HaplotypeScore=135.8331;InbreedingCoeff=0.4294;MQ=66.36;MQ0=4;MQRankSum=-2.505;QD=15.33;ReadPosRankSum=3.828;VQSLOD=5.2027;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:25,1:26:46.92:284,47,0	1/1:12,1:13:35.44:225,35,0	0/1:28,0:19:37.38:37,0,123	0/0:25,0:18:31.37:0,31,312	1/1:26,0:26:76.47:475,76,0	1/1:28,1:29:83.15:594,83,0	1/1:15,0:15:26.50:167,27,0	1/1:19,0:18:53.18:353,53,0	1/1:21,0:21:44.25:280,44,0	1/1:17,0:17:41.31:269,41,0	1/1:18,0:18:52.87:362,53,0	1/1:23,0:23:65.27:471,65,0	1/1:24,1:25:71.32:527,71,0	1/1:21,0:21:59.50:445,59,0	1/1:14,1:15:41.32:262,41,0	1/1:24,1:25:56.05:352,56,0	1/1:18,0:18:38.43:247,38,0	1/1:26,0:26:59.06:377,59,0	0/1:10,0:10:20.71:142,0,21	1/1:27,0:27:76.30:514,76,0	1/1:10,0:10:12.27:75,12,0	1/1:8,0:8:11.80:75,12,0	1/1:21,0:21:49.88:317,50,0	1/1:18,0:18:29.41:189,29,0	1/1:14,0:14:41.61:304,42,0	1/1:22,0:22:64.59:436,65,0	1/1:28,0:28:49.72:293,50,0	1/1:7,0:7:8.77:52,9,0
chr10	21854863	.	G	GT	15528.68	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-12.024;DP=731;FS=5.880;HRun=5;HaplotypeScore=62.7569;InbreedingCoeff=0.9974;MQ=79.93;MQ0=0;MQRankSum=-4.232;QD=34.51;ReadPosRankSum=3.555;VQSLOD=5.2683;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,21:23:57.19:750,57,0	0/0:8,0:8:15.04:0,15,161	0/0:28,0:28:74.37:0,74,756	0/0:12,0:12:26.93:0,27,262	1/1:2,34:36:93.26:1190,93,0	1/1:0,21:21:57.19:750,57,0	1/1:2,21:23:57.19:750,57,0	0/0:50,0:50:99:0,123,1303	0/0:24,0:24:69.17:0,69,742	1/1:2,31:33:93.25:1176,93,0	1/1:2,25:27:75.24:984,75,0	1/1:4,19:23:51.17:671,51,0	1/1:2,39:41:99:1460,111,0	1/1:1,23:24:66.21:868,66,0	1/1:0,36:36:90.29:1184,90,0	0/0:33,0:33:93.23:0,93,1000	0/0:31,0:31:84.21:0,84,902	0/0:16,0:16:45.07:0,45,470	0/0:23,0:23:66.17:0,66,709	0/0:34,0:34:90.21:0,90,959	0/0:22,0:22:63.16:0,63,677	1/1:3,18:21:54.18:710,54,0	1/1:2,30:32:87.24:1120,87,0	1/1:0,16:16:42.14:553,42,0	1/1:1,25:26:69.22:907,69,0	1/1:2,22:24:66.21:867,66,0	1/1:5,29:34:96.29:1234,96,0	1/1:0,10:10:27.09:355,27,0
chr10	21855086	.	TGTAGTCTACTGGAGTGGAGAGCCCGGTATCCTTGTGACATTTCCCA	T	16895.73	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=11.617;DP=607;FS=8.314;HRun=0;HaplotypeScore=637.8612;InbreedingCoeff=0.8962;MQ=88.13;MQ0=0;MQRankSum=-9.492;QD=67.85;ReadPosRankSum=4.812;VQSLOD=-0.4436;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:21,8:29:9.03:995,9,0	0/0:7,0:7:21.07:0,21,2744	0/0:26,0:26:75.26:0,75,4661	0/0:27,0:27:75.26:0,75,5012	1/1:17,7:24:15.52:683,16,0	1/1:11,7:18:15.05:1767,15,0	1/1:13,0:13:3.01:65,3,0	0/0:34,0:34:99:0,99,8496	0/0:23,0:23:63.22:0,63,8523	1/1:13,4:17:12.04:847,12,0	1/1:10,4:14:9.03:759,9,0	1/1:11,9:20:15.05:1767,15,0	1/1:14,15:29:24.08:2827,24,0	1/1:5,7:12:6.02:707,6,0	1/1:11,6:17:6.02:707,6,0	0/0:19,0:19:57.20:0,57,7823	0/0:30,0:30:88.52:0,89,13394	0/0:26,0:26:72.25:0,72,11604	0/0:19,0:19:57.20:0,57,6405	0/0:29,0:29:87.30:0,87,12542	0/0:50,0:50:99:0,148,21247	1/1:8,6:14:12.04:1406,12,0	1/1:7,9:16:12.49:1188,12,0	1/1:5,3:8:5.62:706,6,0	1/1:9,9:18:21.07:2471,21,0	0/0:24,0:24:69.24:0,69,9212	0/0:32,0:32:93.32:0,93,15494	0/0:12,0:12:36.12:0,36,4811
chr10	21858136	.	C	CA	20497.71	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-18.052;DP=744;FS=2.698;HRun=1;HaplotypeScore=66.9259;InbreedingCoeff=0.9971;MQ=98.45;MQ0=0;MQRankSum=-7.052;QD=44.75;ReadPosRankSum=6.093;VQSLOD=4.1472;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,23:24:66.22:1055,66,0	0/0:6,0:6:15.05:0,15,210	0/0:42,0:42:99:0,120,1616	0/0:33,0:33:89.20:0,89,1109	1/1:1,32:33:93.32:1487,93,0	1/1:0,40:40:99:1871,117,0	1/1:0,21:21:63.21:1007,63,0	0/0:35,0:35:99:0,102,1427	0/0:18,0:18:54.18:0,54,755	1/1:0,33:33:99:1554,99,0	1/1:1,17:18:51.17:815,51,0	1/1:1,21:22:51.17:815,51,0	1/1:0,32:32:90.31:1439,90,0	1/1:0,26:26:69.24:1103,69,0	1/1:1,30:31:87.30:1391,87,0	0/0:33,0:33:96.30:0,96,1310	0/0:27,0:27:81.24:0,81,1113	0/0:7,0:7:21.07:0,21,293	0/0:26,0:26:75.22:0,75,998	0/0:28,0:28:84.27:0,84,1153	0/0:31,0:31:93.30:0,93,1285	1/1:1,23:24:60.20:959,60,0	1/1:0,25:25:72.25:1151,72,0	1/1:0,21:21:63.21:1007,63,0	1/1:2,29:31:87.30:1391,87,0	1/1:0,34:34:99:1581,99,0	1/1:0,22:21:60.20:959,60,0	1/1:0,21:21:57.19:911,57,0
chr10	21858721	.	A	ATT	10795.05	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=16.754;DP=466;FS=12.185;HRun=1;HaplotypeScore=119.3611;InbreedingCoeff=0.9642;MQ=83.57;MQ0=0;MQRankSum=-16.508;QD=41.20;ReadPosRankSum=1.111;VQSLOD=3.8526;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,12:20:45.15:676,45,0	0/0:3,0:3:9.03:0,9,137	0/0:21,0:21:36.42:0,36,734	0/0:16,0:16:36.08:0,36,521	1/1:2,11:13:32.65:447,33,0	1/1:5,15:20:49.95:807,50,0	1/1:4,16:20:52.22:831,52,0	0/0:37,0:37:99:0,108,1614	0/0:18,0:18:54.18:0,54,825	1/1:3,10:13:36.11:537,36,0	1/1:2,10:12:36.04:519,36,0	1/1:8,20:28:81.24:1229,81,0	1/1:2,13:14:42.14:630,42,0	1/1:2,16:18:54.17:784,54,0	1/1:4,25:29:87.25:1280,87,0	0/0:20,0:20:60.20:0,60,918	0/0:22,0:22:66.20:0,66,987	0/0:17,0:17:51.17:0,51,776	0/0:16,0:16:45.13:0,45,666	0/0:17,0:17:48.16:0,48,735	0/0:17,0:17:51.15:0,51,756	1/1:0,13:13:39.13:606,39,0	1/1:3,11:14:39.05:551,39,0	1/1:3,5:8:16.04:294,16,0	1/1:4,3:7:20.94:244,21,0	1/1:3,14:17:48.16:765,48,0	1/1:3,10:13:27.84:548,28,0	1/1:0,1:1:3.01:48,3,0
chr10	21858723	.	A	AC	3027.28	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=17.638;DP=455;FS=14.648;HRun=0;HaplotypeScore=133.3466;InbreedingCoeff=0.9561;MQ=84.67;MQ0=0;MQRankSum=-16.671;QD=12.31;ReadPosRankSum=2.424;VQSLOD=4.1003;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,13:17:39.43:198,39,0	0/0:3,0:3:9.03:0,9,125	0/0:20,0:20:48.25:0,48,744	0/0:17,0:17:36.11:0,36,482	1/1:2,11:13:33.88:168,34,0	1/1:5,15:20:51.18:282,51,0	1/1:3,16:19:50.22:253,50,0	0/0:38,0:38:99:0,111,1520	0/0:18,0:18:54.18:0,54,754	1/1:0,11:11:31.47:172,31,0	1/1:1,11:12:32.94:175,33,0	1/1:3,21:24:61.75:323,62,0	1/1:2,12:13:35.18:159,35,0	1/1:3,17:20:50.15:257,50,0	1/1:1,25:26:71.99:345,72,0	0/0:22,0:22:60.20:0,60,839	0/0:22,0:22:66.22:0,66,922	0/0:17,0:17:51.15:0,51,695	0/0:17,0:17:48.16:0,48,671	0/0:18,0:18:51.15:0,51,680	0/0:17,0:17:51.16:0,51,696	1/1:2,13:15:36.93:181,37,0	1/1:2,11:13:34.03:175,34,0	1/1:3,5:8:16.23:76,16,0	1/1:1,3:4:8.65:45,9,0	1/1:2,14:16:45.89:251,46,0	1/1:2,10:12:34.20:177,34,0	1/1:0,1:1:2.90:16,3,0
chr10	21858726	.	G	GC	7178.46	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=16.927;DP=461;FS=21.453;HRun=0;HaplotypeScore=115.1436;InbreedingCoeff=0.9622;MQ=85.92;MQ0=0;MQRankSum=-15.698;QD=28.83;ReadPosRankSum=2.638;VQSLOD=3.5385;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,13:17:39.05:412,39,0	0/0:3,0:3:9.03:0,9,125	0/0:21,0:21:45.80:0,46,743	0/0:18,0:18:34.42:0,34,519	1/1:2,11:13:35.83:356,36,0	1/1:5,15:20:60.02:601,60,0	1/1:2,16:18:51.08:515,51,0	0/0:42,0:42:99:0,123,1594	0/0:18,0:18:54.17:0,54,737	1/1:1,10:12:35.95:367,36,0	1/1:1,11:12:36.07:388,36,0	1/1:3,21:24:72.08:759,72,0	1/1:3,11:13:38.99:384,39,0	1/1:4,17:21:59.96:571,60,0	1/1:1,25:26:75.12:767,75,0	0/0:22,0:22:66.19:0,66,875	0/0:23,0:23:69.21:0,69,945	0/0:16,0:16:48.16:0,48,671	0/0:17,0:17:51.16:0,51,698	0/0:16,0:16:48.13:0,48,651	0/0:16,0:16:48.16:0,48,671	1/1:3,13:16:45.10:482,45,0	1/1:2,11:13:33.09:380,33,0	1/1:2,5:7:15.03:154,15,0	1/1:3,3:6:15.02:152,15,0	1/1:2,14:16:45.04:489,45,0	1/1:2,10:12:36.01:368,36,0	1/1:0,1:1:3.01:34,3,0
chr10	21858924	.	CTATATATATATA	C	290.40	PASS	AB=0.860;AC=10;AF=0.556;AN=18;BaseQRankSum=0.831;DP=151;FS=3.802;HRun=0;HaplotypeScore=53.4890;MQ=81.71;MQ0=0;MQRankSum=1.000;QD=5.38;ReadPosRankSum=1.635;VQSLOD=1.2457;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:7,1:9:0:0,0,0	0/0:4,0:5:2.90:0,3,16	./.	./.	./.	./.	./.	./.	1/1:2,0:2:0.47:1,0,0	1/1:6,2:8:3.01:104,3,0	./.	./.	./.	1/1:4,0:5:3.01:58,3,0	./.	0/1:4,0:4:0:0,0,0	./.	0/1:11,0:12:9.07:76,0,9	0/0:2,0:2:3.01:0,3,31	./.	./.	./.	./.	./.	./.	./.	./.	0/1:8,3:14:11.97:131,0,12
chr10	21858965	.	TAC	T	176.58	PASS	AC=4;AF=0.200;AN=20;BaseQRankSum=-2.866;DP=67;FS=0.000;HRun=0;HaplotypeScore=27.3378;InbreedingCoeff=0.4916;MQ=29.90;MQ0=8;MQRankSum=-2.047;QD=7.68;ReadPosRankSum=-2.740;VQSLOD=2.1160;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:5:3:0,3,25	0/0:1,0:1:0:0,0,0	./.	./.	./.	0/0:2,0:2:0:0,0,0	./.	1/1:9,5:12:29.58:195,30,0	./.	0/0:2,0:2:5.03:0,5,31	./.	./.	./.	0/0:1,0:1:1.55:0,2,4	0/0:1,0:1:3:0,3,25	./.	./.	1/1:9,0:8:11.40:70,11,0	./.	./.	./.	./.	./.	./.	./.	0/0:2,0:2:5.98:0,6,49	./.	0/0:5,0:4:4.81:0,5,29
chr10	21860684	.	GCCA	G	3952.97	PASS	AC=16;AF=0.308;AN=52;BaseQRankSum=6.856;DP=334;FS=2.064;HRun=0;HaplotypeScore=57.4180;InbreedingCoeff=0.9208;MQ=89.83;MQ0=0;MQRankSum=-4.907;QD=39.14;ReadPosRankSum=-0.779;VQSLOD=4.1683;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:33.11:0,33,717	./.	0/0:16,0:15:48.16:0,48,1020	0/0:19,0:18:54.17:0,54,1084	0/0:10,0:10:17.99:0,18,406	0/0:15,0:15:42.14:0,42,948	0/0:15,0:15:39.13:0,39,883	1/1:0,10:11:30.10:499,30,0	1/1:0,13:13:39.13:649,39,0	0/0:12,0:12:30.10:0,30,646	0/0:1,0:1:3.01:0,3,68	0/0:18,0:18:51.17:0,51,1110	0/0:17,0:17:51.17:0,51,1054	0/0:20,0:20:60.20:0,60,1227	0/0:16,0:16:48.12:0,48,1008	1/1:1,23:24:60.21:998,60,0	1/1:2,10:12:27.09:449,27,0	1/1:0,7:7:21.07:330,21,0	1/1:1,13:14:36.08:544,36,0	1/1:1,1:2:3.01:38,3,0	1/1:0,18:17:27.09:445,27,0	0/0:5,0:5:12.04:0,12,240	0/0:3,0:3:9.03:0,9,202	0/0:16,0:16:42.14:0,42,919	./.	0/0:13,0:13:36.12:0,36,786	0/0:14,0:14:39.13:0,39,852	0/0:6,0:6:18.06:0,18,408
chr10	21861613	.	G	GA	5239.64	PASS	AB=0.854;AC=22;AF=0.393;AN=56;BaseQRankSum=-11.860;DP=647;FS=1.502;HRun=10;HaplotypeScore=74.4108;InbreedingCoeff=0.7193;MQ=79.25;MQ0=4;MQRankSum=-0.522;QD=16.63;ReadPosRankSum=0.203;VQSLOD=5.1987;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,34:39:62.41:853,62,0	1/1:2,10:12:33.08:351,33,0	0/1:36,0:26:40.48:80,0,40	0/1:31,0:22:1.53:2,0,137	0/0:21,1:23:23.97:0,24,392	0/0:19,1:20:24.94:0,25,410	0/0:23,0:23:62.88:0,63,510	1/1:9,17:26:48.09:496,48,0	1/1:2,9:11:27.07:288,27,0	0/0:29,0:28:38.14:0,38,511	0/0:21,0:21:53.91:0,54,440	0/0:21,0:21:56.92:0,57,468	0/1:15,3:18:12.91:13,0,315	0/0:14,0:14:26.30:0,26,262	0/0:22,0:22:59.91:0,60,492	1/1:3,10:13:8.44:295,8,0	1/1:4,40:44:53.55:775,54,0	0/1:5,18:24:13.95:466,0,14	1/1:2,24:26:72.17:757,72,0	1/1:2,23:25:69.17:736,69,0	1/1:2,6:8:12.03:128,12,0	0/0:9,0:9:18.28:0,18,189	0/0:20,0:20:56.91:0,57,464	0/0:21,0:23:44.12:0,44,374	0/0:29,0:30:60.30:0,60,602	0/0:6,0:32:46.09:0,46,134	0/0:3,0:30:50.69:0,51,146	0/0:1,0:15:27.44:0,27,95
chr10	21865299	.	AT	A	7089.86	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=10.136;DP=569;FS=5.994;HRun=10;HaplotypeScore=60.4950;InbreedingCoeff=0.9343;MQ=70.42;MQ0=0;MQRankSum=-0.684;QD=20.20;ReadPosRankSum=3.875;VQSLOD=5.8480;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:36.10:0,36,396	0/0:9,1:10:4.02:0,4,271	0/0:17,0:16:6.20:0,6,296	0/0:11,0:9:1.81:0,2,114	1/1:3,28:31:71.97:624,72,0	1/1:4,26:30:38.81:566,39,0	1/1:4,10:14:29.99:260,30,0	0/0:26,0:26:63.16:0,63,689	0/0:19,0:19:45.10:0,45,478	1/1:3,19:22:53.86:457,54,0	1/1:1,23:24:59.98:520,60,0	1/1:2,22:24:62.99:547,63,0	1/1:2,21:23:44.99:391,45,0	1/1:3,17:20:41.99:364,42,0	1/1:4,22:26:37.77:542,38,0	0/0:20,0:20:56.98:0,57,605	0/0:21,0:21:60.11:0,60,647	0/0:13,0:13:34.32:0,34,387	0/0:21,0:21:44.95:0,45,473	0/0:31,0:31:81.21:0,81,888	0/0:15,0:15:36.10:0,36,398	1/1:1,14:16:37.97:318,38,0	1/1:1,24:25:62.99:547,63,0	1/1:1,7:8:18:156,18,0	1/1:3,24:27:59.98:521,60,0	1/1:1,19:20:53.98:469,54,0	1/1:2,21:23:44.99:390,45,0	1/1:2,16:18:47.99:417,48,0
chr10	21865498	.	CTG	C	26623.38	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-5.384;DP=739;FS=9.143;HRun=0;HaplotypeScore=102.4246;InbreedingCoeff=0.9911;MQ=86.77;MQ0=4;MQRankSum=-12.391;QD=39.27;ReadPosRankSum=8.627;VQSLOD=5.8671;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,45:44:99:1856,126,0	1/1:0,8:7:15.05:221,15,0	0/0:29,0:29:78.26:0,78,1404	0/0:32,0:32:88.80:0,89,1495	1/1:0,29:29:69.23:1016,69,0	1/1:1,31:30:84.28:1237,84,0	1/1:0,16:16:36.12:530,36,0	1/1:2,34:36:99:1442,102,0	1/1:1,19:20:54.18:795,54,0	1/1:1,25:26:75.25:1103,75,0	1/1:0,24:24:63.21:928,63,0	1/1:1,29:30:75.25:1103,75,0	1/1:0,33:33:93.31:1369,93,0	1/1:1,30:31:75.25:1104,75,0	1/1:0,24:24:69.23:1016,69,0	1/1:0,26:26:68.96:1016,69,0	1/1:0,41:41:99:1722,117,0	1/1:0,11:11:30.10:442,30,0	1/1:1,23:24:66.21:955,66,0	1/1:0,33:33:90.30:1325,90,0	1/1:0,27:27:78.26:1149,78,0	1/1:0,33:34:87.29:1281,87,0	1/1:1,24:25:63.21:928,63,0	1/1:0,21:21:57.19:839,57,0	1/1:0,24:24:57.19:839,57,0	1/1:1,28:29:84.26:1215,84,0	1/1:1,18:19:54.18:795,54,0	1/1:0,10:10:27.09:398,27,0
chr10	21866329	.	C	CTCCT	3098.23	PASS	AB=1.000;AC=27;AF=0.675;AN=40;BaseQRankSum=3.192;DP=224;FS=23.904;HRun=0;HaplotypeScore=86.0918;InbreedingCoeff=0.3205;MQ=59.40;MQ0=23;MQRankSum=1.953;QD=18.78;ReadPosRankSum=2.705;VQSLOD=1.6811;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:36,0:33:7.38:575,7,0	./.	0/0:18,0:7:10.94:0,11,157	0/0:23,0:12:18.18:0,18,229	1/1:4,0:4:2.99:40,3,0	1/1:7,0:6:18.06:300,18,0	1/1:4,5:9:6.02:84,6,0	0/0:3,0:1:3.01:0,3,48	./.	1/1:11,0:10:23.98:353,24,0	1/1:9,0:7:9.97:159,10,0	0/1:4,0:4:4.81:84,0,5	0/1:13,0:11:4.24:264,0,4	0/1:9,0:9:14.24:207,0,14	0/0:8,0:8:23.70:0,24,277	./.	./.	./.	./.	./.	./.	1/1:8,0:8:6.49:90,6,0	1/1:10,0:10:15.01:200,15,0	0/1:15,0:14:13.10:182,0,13	1/1:7,0:5:15.03:236,15,0	1/1:7,0:7:18.02:275,18,0	1/1:5,0:5:8.88:131,9,0	0/1:9,0:7:35.58:63,0,36
chr10	21866684	.	G	GA	14472.03	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-2.152;DP=552;FS=10.643;HRun=7;HaplotypeScore=81.0401;InbreedingCoeff=0.9889;MQ=84.60;MQ0=0;MQRankSum=-7.440;QD=30.53;ReadPosRankSum=1.868;VQSLOD=4.5887;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,27:34:87.11:978,87,0	1/1:2,12:14:39.12:471,39,0	0/0:23,0:23:23.92:0,24,326	0/0:24,0:24:23.55:0,24,463	1/1:2,12:15:29.96:341,30,0	1/1:2,20:22:60.12:706,60,0	1/1:6,16:22:28.12:580,28,0	1/1:7,24:31:72.21:858,72,0	1/1:0,19:19:54.03:615,54,0	1/1:0,14:14:42.09:489,42,0	1/1:2,8:10:27.08:319,27,0	1/1:2,13:15:41.93:464,42,0	1/1:6,29:35:99:1167,99,0	1/1:1,17:18:51.09:597,51,0	0/0:31,0:31:84.08:0,84,788	1/1:9,21:30:81.10:902,81,0	1/1:5,16:21:48.15:579,48,0	1/1:3,5:8:15.03:169,15,0	1/1:3,14:18:51:573,51,0	1/1:5,20:25:72.16:831,72,0	1/1:4,9:13:24.07:290,24,0	1/1:3,11:14:42.11:485,42,0	1/1:3,10:13:26.62:314,27,0	1/1:3,13:16:42.12:496,42,0	1/1:3,4:7:21.04:232,21,0	1/1:1,22:23:66.20:795,66,0	1/1:4,23:28:78.23:929,78,0	1/1:1,7:9:26.97:292,27,0
chr10	21866727	.	TC	T	10424.23	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=0.708;DP=585;FS=4.188;HRun=9;HaplotypeScore=102.7149;InbreedingCoeff=0.9726;MQ=80.01;MQ0=1;MQRankSum=-8.536;QD=19.71;ReadPosRankSum=6.406;VQSLOD=4.4402;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,0:31:48.88:143,49,0	1/1:3,17:20:54.03:494,54,0	0/0:30,0:30:59.18:0,59,671	0/0:26,0:24:17.20:0,17,406	1/1:1,19:20:57.03:522,57,0	1/1:3,18:21:54.01:490,54,0	1/1:5,21:26:60.02:549,60,0	1/1:14,13:27:53.98:484,54,0	1/1:2,0:24:43.25:126,43,0	1/1:1,16:17:48.03:439,48,0	1/1:2,7:9:21.01:192,21,0	1/1:1,15:16:42.02:384,42,0	1/1:4,31:35:93.01:843,93,0	1/1:1,21:22:60.03:549,60,0	1/1:4,33:37:89.91:824,90,0	1/1:1,23:24:69.03:631,69,0	1/1:3,16:19:50.98:458,51,0	1/1:0,10:10:23.97:212,24,0	1/1:3,0:17:23.30:70,23,0	1/1:3,0:36:65.18:191,65,0	1/1:2,0:8:12.22:36,12,0	1/1:0,20:20:60.03:549,60,0	1/1:1,9:10:27.01:247,27,0	1/1:1,12:13:33.02:302,33,0	1/1:0,10:10:30.02:275,30,0	1/1:3,18:21:56.99:514,57,0	1/1:3,25:28:78.02:708,78,0	1/1:0,7:7:21.01:192,21,0
chr10	21867236	.	A	AT	266.07	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-4.029;DP=464;FS=4.840;HRun=1;HaplotypeScore=41.8622;InbreedingCoeff=0.9707;MQ=82.19;MQ0=0;MQRankSum=0.577;QD=26.61;ReadPosRankSum=1.290;VQSLOD=3.4114;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:39.13:0,39,506	0/0:6,0:6:18.06:0,18,233	0/0:14,0:14:35.29:0,35,486	0/0:11,0:11:32.97:0,33,360	0/0:35,0:34:99:0,102,1305	0/0:18,0:18:54.16:0,54,685	0/0:14,0:14:42.13:0,42,533	0/0:31,0:31:90.27:0,90,1140	0/0:9,0:9:27.09:0,27,350	0/0:15,0:15:45.11:0,45,556	0/0:22,0:22:63.18:0,63,781	0/0:9,0:9:27.01:0,27,315	0/0:20,0:20:60.18:0,60,764	0/0:9,0:9:27.07:0,27,325	1/1:0,10:10:24.08:359,24,0	0/0:15,0:15:45.15:0,45,584	0/0:24,0:23:66.19:0,66,839	0/0:13,0:13:33.11:0,33,427	0/0:16,0:16:48.13:0,48,595	0/0:25,0:25:69.18:0,69,850	0/0:19,0:19:54.10:0,54,650	0/0:12,0:12:33.08:0,33,391	0/0:19,0:19:57.16:0,57,711	0/0:5,0:5:15.05:0,15,194	0/0:18,0:18:51.14:0,51,633	0/0:27,0:27:78.21:0,78,982	0/0:20,0:20:57.19:0,57,739	0/0:13,0:13:36.12:0,36,467
chr10	21867387	.	C	CAT	12533.07	PASS	AB=0.648;AC=43;AF=0.768;AN=56;BaseQRankSum=-8.375;DP=473;FS=1.185;HRun=0;HaplotypeScore=53.4307;InbreedingCoeff=0.0874;MQ=70.85;MQ0=4;MQRankSum=-0.119;QD=28.29;ReadPosRankSum=2.181;VQSLOD=5.8138;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:45.12:0,45,540	1/1:4,4:8:12.04:196,12,0	0/0:12,0:10:15.04:0,15,175	0/1:18,0:12:0.98:1,0,57	1/1:11,19:30:32.14:627,32,0	1/1:5,17:22:48.16:783,48,0	0/1:3,5:8:24.75:135,0,25	1/1:15,28:43:19.43:1299,19,0	1/1:1,12:13:39.13:635,39,0	1/1:3,19:21:20.25:827,20,0	1/1:3,15:18:2.21:550,2,0	1/1:1,3:10:21.04:253,21,0	1/1:5,15:20:8.23:647,8,0	0/1:2,8:10:9.84:342,0,10	1/1:0,8:8:21.07:342,21,0	1/1:4,17:21:5.11:599,5,0	1/1:5,16:21:8.23:618,8,0	1/1:5,7:12:12.04:196,12,0	1/1:5,10:16:2.13:473,2,0	1/1:5,17:22:11.25:697,11,0	0/1:8,8:16:99:352,0,145	0/1:5,3:8:79.55:129,0,80	1/1:1,6:7:15.05:245,15,0	1/1:2,8:11:6.92:279,7,0	0/1:3,12:14:40.73:407,0,41	0/1:4,25:30:4.89:1086,0,5	0/1:5,19:26:19.67:684,0,20	0/1:2,3:5:39.13:132,0,39
chr10	21868793	.	AATT	A	312.13	PASS	AB=0.783;AC=2;AF=0.036;AN=56;BaseQRankSum=2.110;DP=385;FS=4.257;HRun=0;HaplotypeScore=176.5732;InbreedingCoeff=0.3895;MQ=64.89;MQ0=0;MQRankSum=-3.348;QD=16.43;ReadPosRankSum=-0.810;VQSLOD=3.0418;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:27.02:0,27,484	0/0:6,0:6:18.04:0,18,313	0/1:6,0:6:3.57:4,0,129	0/0:10,0:10:20.65:0,21,265	0/0:22,0:22:57.07:0,57,977	0/0:20,0:20:57.19:0,57,1183	0/0:13,0:13:30.01:0,30,573	0/0:34,0:34:93.25:0,93,1774	0/0:14,0:13:39.13:0,39,794	0/0:17,0:17:48.16:0,48,962	0/0:23,0:22:66.21:0,66,1281	0/0:10,0:10:26.98:0,27,496	0/0:20,0:20:57.19:0,57,1202	0/0:12,0:12:36.04:0,36,652	0/1:3,10:13:0.37:386,0,0	0/0:16,0:16:45.11:0,45,821	0/0:7,0:7:21.07:0,21,445	0/0:6,0:6:18.06:0,18,362	0/0:21,0:21:54.18:0,54,1059	0/0:14,0:14:39.13:0,39,838	0/0:7,0:7:18.06:0,18,340	0/0:9,0:9:24.08:0,24,488	0/0:14,0:14:29.99:0,30,458	0/0:5,0:5:12.04:0,12,230	0/0:13,0:13:39.12:0,39,756	0/0:18,0:18:51.16:0,51,1010	0/0:16,0:16:45.10:0,45,777	0/0:8,0:8:24.07:0,24,470
chr10	21868939	.	TG	T	5956.01	PASS	AC=50;AF=1.000;AN=50;DP=309;FS=0.000;HRun=1;HaplotypeScore=297.9544;InbreedingCoeff=-0.0057;MQ=35.23;MQ0=0;QD=19.40;VQSLOD=4.0643;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,5:6:11.91:85,12,0	1/1:0,10:10:26.83:195,27,0	./.	./.	1/1:1,17:18:44.57:310,45,0	1/1:0,13:13:38.73:280,39,0	1/1:2,16:18:47.67:346,48,0	1/1:4,14:18:53.74:406,54,0	1/1:1,6:7:20.84:148,21,0	1/1:0,19:19:53.57:405,54,0	1/1:3,17:20:52.90:361,53,0	1/1:0,8:8:23.76:165,24,0	1/1:1,10:10:23.83:171,24,0	1/1:2,8:10:29.77:212,30,0	1/1:2,4:5:14.88:105,15,0	1/1:3,7:9:26.79:190,27,0	1/1:1,6:7:17.87:128,18,0	1/1:1,4:5:11.92:87,12,0	1/1:1,4:5:14.93:114,15,0	1/1:3,15:18:47.63:339,48,0	1/1:1,3:4:11.92:86,12,0	1/1:0,14:14:35.73:255,36,0	1/1:1,13:14:41.65:294,42,0	./.	1/1:0,21:21:56.57:403,57,0	1/1:2,14:14:41.75:307,42,0	1/1:2,15:17:47.66:346,48,0	1/1:3,9:12:29.80:218,30,0
chr10	21868945	.	TA	T	5361.77	PASS	AC=50;AF=1.000;AN=50;BaseQRankSum=3.869;DP=302;FS=0.000;HRun=1;HaplotypeScore=298.2944;InbreedingCoeff=-0.0085;MQ=29.33;MQ0=0;MQRankSum=-0.580;QD=17.75;ReadPosRankSum=2.665;VQSLOD=4.1723;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,5:7:8.91:62,9,0	1/1:0,10:10:25.11:190,25,0	./.	./.	1/1:3,17:20:42.85:305,43,0	1/1:0,13:13:32.79:237,33,0	1/1:1,16:17:47.68:344,48,0	1/1:0,14:14:41.84:322,42,0	1/1:1,6:7:20.82:145,21,0	1/1:0,19:19:53.56:402,54,0	1/1:1,17:18:45.90:313,46,0	1/1:1,8:9:23.78:166,24,0	1/1:2,10:11:26.77:187,27,0	1/1:1,8:9:20.84:149,21,0	1/1:2,4:5:14.86:103,15,0	1/1:3,7:10:20.35:145,20,0	1/1:4,6:10:19.89:143,20,0	1/1:1,4:5:11.90:84,12,0	1/1:1,4:5:12.84:94,13,0	1/1:3,15:18:41.96:321,42,0	1/1:0,3:3:8.95:66,9,0	1/1:0,14:14:28.72:211,29,0	1/1:0,13:13:35.73:253,36,0	./.	1/1:1,21:22:48.52:354,49,0	1/1:1,14:14:41.74:305,42,0	1/1:2,15:17:39.64:284,40,0	1/1:0,9:9:23.88:177,24,0
chr10	21869070	.	GGTGTGT	G	695.92	PASS	AB=0.933;AC=31;AF=0.705;AN=44;BaseQRankSum=2.272;DP=381;FS=2.657;HRun=0;HaplotypeScore=110.5392;InbreedingCoeff=0.2029;MQ=49.40;MQ0=16;MQRankSum=-3.198;QD=2.61;ReadPosRankSum=-0.276;VQSLOD=2.2282;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:13:15.04:0,15,245	0/1:9,0:10:33.85:34,0,83	./.	./.	0/0:10,0:10:5.98:0,6,47	1/1:16,0:16:11.97:107,12,0	1/1:20,0:20:3.01:42,3,0	1/1:23,0:21:1.24:15,1,0	1/1:9,1:10:3.01:47,3,0	1/1:14,0:13:5.97:61,6,0	0/1:12,0:12:0:0,0,0	./.	1/1:12,0:12:3.01:42,3,0	1/1:11,0:10:2.96:19,3,0	./.	1/1:14,1:16:8.85:99,9,0	1/1:17,0:17:2.77:43,3,0	0/1:12,1:13:31.13:104,0,31	./.	1/1:11,3:16:3.01:57,3,0	1/1:26,0:25:2.97:20,3,0	0/1:8,0:8:5.63:13,0,6	1/1:14,0:14:2.65:14,3,0	./.	1/1:13,0:13:6.02:76,6,0	0/0:16,0:16:9.52:0,10,183	0/1:13,0:15:39.54:40,0,56	0/0:11,0:9:11.99:0,12,120
chr10	21869091	.	GTGTGTGTGTGTGTGTGTGTGTGCGCGCGCGCGCGCGCGGC	G	634.84	PASS	AB=0.932;AC=26;AF=0.500;AN=52;BaseQRankSum=1.683;DP=329;FS=5.504;HRun=0;HaplotypeScore=241.6662;InbreedingCoeff=0.3026;MQ=39.50;MQ0=25;MQRankSum=-0.675;QD=3.71;ReadPosRankSum=-0.783;VQSLOD=1.6414;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:20:24.55:0,25,2049	0/1:7,0:7:33.85:34,0,157	./.	./.	0/0:12,0:12:9.01:0,9,339	1/1:9,0:9:8.34:62,8,0	0/0:17,0:17:5.81:0,6,213	1/1:15,0:13:0.86:15,1,0	1/1:10,0:10:3.01:47,3,0	0/1:8,0:8:10.10:10,0,228	1/1:11,0:11:0.12:1,0,0	0/1:6,0:6:0:0,0,0	0/0:10,0:9:2.65:0,3,14	1/1:5,0:4:3.31:15,3,0	1/1:6,0:5:0.47:1,0,0	1/1:13,0:13:8.85:99,9,0	0/1:5,11:16:3.88:296,0,4	0/1:13,0:12:31.13:104,0,31	0/0:5,0:3:0.47:0,0,1	1/1:12,0:12:3.01:57,3,0	1/1:19,0:15:2.97:20,3,0	0/0:11,0:11:8.82:0,9,115	1/1:12,0:11:2.84:14,3,0	0/0:9,0:7:0:0,0,0	0/1:9,0:9:1.42:1,0,219	0/0:18,0:16:21.61:0,22,1003	0/0:10,0:10:21.07:0,21,1219	0/0:14,0:12:30.06:0,30,1692
chr10	21869094	.	TGTGTGTGTGTGTGTGTGTGC	T	2832.02	PASS	AB=0.980;AC=19;AF=0.352;AN=54;BaseQRankSum=1.410;DP=335;FS=0.000;HRun=0;HaplotypeScore=143.5884;InbreedingCoeff=0.5600;MQ=38.90;MQ0=26;MQRankSum=-0.844;QD=27.50;ReadPosRankSum=-3.507;VQSLOD=1.4817;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:21:33.10:0,33,1749	0/0:7,0:7:9.03:0,9,403	0/0:10,0:4:12.04:0,12,322	0/0:19,0:3:5.99:0,6,151	0/0:12,0:12:17.91:0,18,562	1/1:4,4:8:15.05:665,15,0	0/1:15,1:16:31.87:250,0,32	0/0:15,0:13:22.32:0,22,825	0/0:11,0:11:0.81:0,1,247	1/1:5,2:7:6.88:437,7,0	1/1:9,1:10:11.55:244,12,0	1/1:6,0:6:3.01:71,3,0	1/1:9,1:9:14.93:346,15,0	1/1:3,1:3:6.02:239,6,0	0/0:6,0:5:3.01:0,3,95	0/0:13,0:13:24.07:0,24,715	0/1:16,0:16:99:126,0,139	0/0:16,0:15:10.09:0,10,567	0/1:6,0:4:18.79:19,0,74	0/0:14,0:14:9.03:0,9,352	0/0:23,0:19:12.03:0,12,353	0/0:11,0:11:18.04:0,18,659	1/1:6,4:9:9.02:175,9,0	./.	1/1:8,2:10:15.03:442,15,0	0/0:17,0:15:42.14:0,42,1868	0/0:10,0:10:24.08:0,24,1256	0/0:14,0:12:11.51:0,12,1272
chr10	21869110	.	TGTGC	T	1666.81	PASS	AC=40;AF=0.833;AN=48;BaseQRankSum=-0.629;DP=270;FS=6.294;HRun=0;HaplotypeScore=91.1095;InbreedingCoeff=0.4740;MQ=39.02;MQ0=21;MQRankSum=-0.234;QD=8.77;ReadPosRankSum=0.171;VQSLOD=1.6242;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:23:8.63:0,9,259	0/0:6,0:6:2.52:0,3,39	./.	0/0:9,0:2:5.90:0,6,38	1/1:12,0:12:8.67:73,9,0	1/1:9,0:9:16.41:113,16,0	1/1:16,0:16:17.99:159,18,0	./.	1/1:6,0:6:5.34:23,5,0	1/1:6,0:6:13.96:116,14,0	1/1:13,0:13:11.90:87,12,0	1/1:7,0:7:5.99:48,6,0	1/1:5,0:4:11.89:98,12,0	1/1:5,0:4:4.90:18,5,0	./.	1/1:4,0:4:2.88:16,3,0	1/1:15,0:15:2.53:27,3,0	1/1:10,0:9:8.64:47,9,0	1/1:4,0:3:5.68:28,6,0	1/1:12,0:12:2.94:18,3,0	0/0:17,0:13:0:0,0,1	1/1:9,0:9:7.99:49,8,0	./.	1/1:11,0:9:2.72:23,3,0	1/1:6,0:6:11.95:109,12,0	1/1:15,1:14:14.92:294,15,0	1/1:6,3:9:15.98:227,16,0	1/1:15,0:13:28.89:213,29,0
chr10	21869113	.	GCGCGCGCGCGCGCGCGGC	G	850.83	PASS	AB=0.906;AC=14;AF=0.259;AN=54;BaseQRankSum=-2.428;DP=269;FS=1.075;HRun=0;HaplotypeScore=131.3780;InbreedingCoeff=0.3103;MQ=39.30;MQ0=20;MQRankSum=-4.382;QD=11.50;ReadPosRankSum=-2.008;VQSLOD=2.2546;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:25:45.63:0,46,2604	0/0:4,1:5:3.01:0,3,111	./.	0/0:8,0:2:6.02:0,6,128	0/0:12,0:12:9.50:0,10,407	0/0:10,0:10:12.21:0,12,445	0/1:17,0:17:23.43:23,0,832	1/1:4,2:6:5.98:98,6,0	1/1:3,1:4:3.01:158,3,0	0/1:7,0:7:16.24:16,0,475	0/0:13,0:13:12.04:0,12,492	0/0:6,0:6:6.49:0,6,262	0/0:5,0:4:3.35:0,3,237	0/1:5,0:4:0.15:0,0,124	1/1:6,0:5:0.47:1,0,0	0/0:2,1:3:0:0,0,0	1/1:15,0:15:4.74:134,5,0	0/1:4,6:9:30.87:150,0,31	1/1:1,3:3:9.03:406,9,0	0/0:7,5:12:3:0,3,28	0/0:9,6:11:0:0,0,0	0/0:9,0:9:8.40:0,8,228	0/0:7,0:6:1.18:0,1,3	0/0:12,0:10:5.32:0,5,324	0/0:6,0:6:5.11:0,5,200	0/0:18,0:16:34.24:0,34,1391	0/0:10,0:10:16.41:0,16,790	0/0:12,0:10:20.54:0,21,853
chr10	21869131	.	CTG	C	3999.37	PASS	AB=1.000;AC=37;AF=0.740;AN=50;BaseQRankSum=0.274;DP=305;FS=8.800;HRun=0;HaplotypeScore=83.6902;InbreedingCoeff=0.6771;MQ=45.91;MQ0=12;MQRankSum=-0.354;QD=15.81;ReadPosRankSum=2.104;VQSLOD=3.2269;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:10,20:28:47.91:547,48,0	0/0:4,0:4:3.01:0,3,47	./.	0/0:12,0:4:6.02:0,6,94	1/1:1,14:15:5.87:74,6,0	1/1:5,9:14:24.07:294,24,0	1/1:2,18:20:36.11:446,36,0	0/0:5,0:5:15.03:0,15,168	./.	1/1:1,11:13:32.93:385,33,0	1/1:3,9:12:15.05:186,15,0	1/1:2,7:9:12.04:149,12,0	1/1:1,10:10:12.04:148,12,0	1/1:1,10:11:24.08:297,24,0	1/1:1,6:6:9.03:111,9,0	0/0:1,0:1:0:0,0,0	1/1:14,0:14:2.80:13,3,0	0/0:10,0:10:9.03:0,9,116	0/0:3,0:3:2.82:0,3,26	./.	0/1:14,0:12:0:0,0,1	1/1:1,8:9:6.02:73,6,0	1/1:4,7:10:6.02:71,6,0	1/1:4,10:13:12.75:182,13,0	1/1:1,11:13:17.89:197,18,0	1/1:7,2:10:16.27:174,16,0	1/1:5,7:12:20.94:211,21,0	1/1:1,12:13:36.11:442,36,0
chr10	21870604	.	A	ATTTG	1359.90	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-5.862;DP=733;FS=5.600;HRun=0;HaplotypeScore=125.4239;InbreedingCoeff=0.9930;MQ=72.07;MQ0=0;MQRankSum=0.596;QD=48.57;ReadPosRankSum=2.162;VQSLOD=4.5822;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:69.23:0,69,1179	0/0:14,0:14:42.14:0,42,720	0/0:25,0:25:60.11:0,60,903	0/0:23,0:23:43.47:0,43,694	0/0:31,0:31:72.06:0,72,1160	0/0:24,0:24:60.21:0,60,1051	0/0:18,0:18:28.74:0,29,660	0/0:33,0:33:66.16:0,66,1008	0/0:22,0:22:60.10:0,60,944	0/0:38,0:38:99:0,105,1794	0/0:25,0:25:60.07:0,60,944	0/0:28,0:28:69.22:0,69,1167	0/0:13,0:13:24.06:0,24,392	0/0:24,0:24:66.15:0,66,1036	1/1:3,24:28:57.20:1455,57,0	0/0:34,0:34:96.30:0,96,1598	0/0:25,0:25:72.11:0,72,1214	0/0:22,0:22:60.16:0,60,994	0/0:28,0:28:75.16:0,75,1195	0/0:36,0:36:99:0,102,1671	0/0:26,0:26:57.15:0,57,914	0/0:25,0:25:63.10:0,63,1013	0/0:32,0:32:90.15:0,90,1417	0/0:14,0:14:33.09:0,33,548	0/0:34,0:34:84.25:0,84,1379	0/0:41,0:41:96.27:0,96,1548	0/0:38,0:38:41.09:0,41,1275	0/0:7,0:7:21.07:0,21,359
chr10	21876577	.	T	TAC	1323.86	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-8.109;DP=671;FS=1.581;HRun=0;HaplotypeScore=113.4705;InbreedingCoeff=0.7539;MQ=65.98;MQ0=0;MQRankSum=0.399;QD=37.82;ReadPosRankSum=3.593;VQSLOD=5.6735;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,105,1357	0/0:16,0:16:42.14:0,42,563	0/0:6,0:6:5.79:0,6,58	0/0:5,0:5:5.91:0,6,55	0/0:30,0:30:78.21:0,78,1001	0/0:21,0:21:57.19:0,57,768	0/0:20,0:20:48.06:0,48,563	0/0:32,0:32:81.24:0,81,1051	0/0:29,0:29:81.25:0,81,1076	0/0:23,0:23:51.17:0,51,688	0/0:23,0:23:54.15:0,54,696	0/0:24,0:24:66.21:0,66,875	0/0:28,0:28:75.25:0,75,1011	0/0:24,0:24:38.35:0,38,786	1/1:3,32:35:81.10:1418,81,0	0/0:26,0:26:69.20:0,69,901	0/0:31,0:31:84.13:0,84,1072	0/0:20,0:20:54.15:0,54,710	0/0:23,0:23:57.15:0,57,720	0/0:25,0:25:69.23:0,69,929	0/0:35,0:35:99:0,102,1340	0/0:33,0:33:84.26:0,84,1116	0/0:19,0:19:39.11:0,39,508	0/0:26,0:26:72.22:0,72,956	0/0:23,0:23:66.17:0,66,841	0/0:25,0:25:63.21:0,63,851	0/0:22,0:22:63.19:0,63,834	0/0:3,0:3:6.02:0,6,81
chr10	21878568	.	ACT	A	4779.75	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=13.497;DP=721;FS=0.000;HRun=0;HaplotypeScore=108.0834;InbreedingCoeff=0.9990;MQ=83.44;MQ0=2;MQRankSum=-2.869;QD=35.94;ReadPosRankSum=1.502;VQSLOD=7.0053;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,102,1836	0/0:14,0:14:39.13:0,39,702	0/0:21,0:21:54.18:0,54,952	0/0:24,0:24:68.56:0,69,1115	1/1:1,33:34:93.31:1301,93,0	0/0:22,0:22:60.21:0,60,1067	0/0:17,0:17:45.15:0,45,810	0/0:33,0:33:93.32:0,93,1643	0/0:27,0:27:81.28:0,81,1444	0/0:30,0:30:90.30:0,90,1580	0/0:20,0:20:57.20:0,57,1021	0/0:21,0:21:57.20:0,57,1020	0/0:34,0:34:96.33:0,96,1713	0/0:36,0:36:99:0,108,1877	0/0:30,0:30:87.30:0,87,1561	0/0:28,0:28:81.28:0,81,1453	0/0:20,0:20:60.21:0,60,1080	0/0:15,0:15:42.14:0,42,756	0/0:30,0:30:87.30:0,87,1520	0/0:37,0:37:99:0,105,1890	0/0:27,0:27:78.27:0,78,1378	1/1:5,26:31:72.24:1007,72,0	0/0:24,0:24:69.24:0,69,1229	0/0:20,0:20:57.20:0,57,1021	0/0:23,0:23:69.24:0,69,1229	1/1:0,31:30:90.30:1258,90,0	1/1:1,24:24:66.22:919,66,0	1/1:1,11:11:21.07:294,21,0
chr10	21878706	.	TCTCTCTGTCTGTCTGA	T	8997.40	PASS	AB=1.000;AC=33;AF=0.589;AN=56;BaseQRankSum=10.338;DP=703;FS=4.013;HRun=0;HaplotypeScore=263.4692;InbreedingCoeff=0.8624;MQ=71.87;MQ0=7;MQRankSum=-6.144;QD=28.21;ReadPosRankSum=3.640;VQSLOD=3.6940;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:13,21:34:6.02:76,6,0	0/1:6,0:6:0.93:1,0,716	0/0:61,0:31:43.23:0,43,798	0/0:95,0:56:69.80:0,70,1464	1/1:2,16:18:5.95:56,6,0	1/1:2,15:17:18.06:700,18,0	1/1:3,15:18:9.03:114,9,0	0/0:41,0:41:78.25:0,78,3060	0/0:32,0:32:84.29:0,84,4609	1/1:8,19:27:38.28:1067,38,0	1/1:1,10:11:3.01:56,3,0	1/1:2,16:17:18.06:723,18,0	1/1:3,18:21:15.05:563,15,0	1/1:3,18:21:27.09:1206,27,0	0/0:18,0:18:36.12:0,36,1542	0/0:26,0:26:60.21:0,60,3478	0/0:21,0:21:51.18:0,51,2590	0/0:21,0:21:39.08:0,39,1575	0/0:25,0:25:54.16:0,54,2384	0/0:11,0:11:30.10:0,30,1904	0/0:27,0:27:68.29:0,68,3351	1/1:4,17:21:8.91:74,9,0	1/1:5,8:13:6.02:167,6,0	1/1:22,0:22:15.02:377,15,0	1/1:3,17:20:27.36:667,27,0	1/1:7,21:28:60.19:2155,60,0	1/1:4,11:15:15.05:573,15,0	1/1:2,7:9:11.99:423,12,0
chr10	21878870	.	TCA	T	3577.98	PASS	AB=0.933;AC=37;AF=0.661;AN=56;BaseQRankSum=-5.677;DP=585;FS=1.923;HRun=0;HaplotypeScore=111.7837;InbreedingCoeff=0.0338;MQ=49.01;MQ0=17;MQRankSum=3.190;QD=7.00;ReadPosRankSum=-0.736;VQSLOD=3.0221;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:33,0:32:1.56:231,2,0	1/1:10,0:10:13.82:107,14,0	1/1:5,0:2:4.07:12,4,0	0/0:13,0:5:11.81:0,12,87	0/0:28,0:28:43.90:0,44,364	1/1:19,0:18:23.94:190,24,0	0/1:12,0:12:9.98:83,0,10	0/1:13,13:26:8.01:254,0,8	1/1:26,0:26:16.11:252,16,0	0/1:42,0:42:49.60:568,0,50	1/1:24,0:24:21.56:282,22,0	1/1:22,0:18:19.99:159,20,0	0/1:9,18:27:30.58:58,0,31	1/1:6,22:27:2.91:35,3,0	0/0:9,0:12:4.78:0,5,17	0/1:22,0:18:7.48:133,0,7	0/1:12,0:11:30.66:31,0,45	1/1:20,0:20:21.86:250,22,0	0/1:10,0:8:24.26:38,0,24	0/1:22,0:22:30.05:176,0,30	0/1:15,0:13:17.75:18,0,37	0/0:18,0:18:10.80:0,11,144	1/1:9,17:26:5.45:47,5,0	1/1:17,8:22:9.01:96,9,0	1/1:8,18:27:8.79:67,9,0	0/1:27,0:27:9.27:267,0,9	0/1:21,0:19:8.74:89,0,9	1/1:10,0:8:20.57:137,21,0
chr10	21879036	.	C	CT	12941.07	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=14.899;DP=656;FS=15.285;HRun=5;HaplotypeScore=92.2957;InbreedingCoeff=0.9895;MQ=71.81;MQ0=0;MQRankSum=-1.460;QD=33.35;ReadPosRankSum=2.519;VQSLOD=3.5645;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,43:44:99:1539,117,0	0/0:11,0:11:30.08:0,30,322	0/0:10,0:10:21.05:0,21,218	0/0:11,0:11:16.96:0,17,109	1/1:1,26:27:75.17:959,75,0	1/1:1,22:23:51.17:671,51,0	1/1:2,27:29:66.21:868,66,0	0/0:32,0:32:84.19:0,84,891	0/0:25,0:25:71.02:0,71,759	1/1:2,27:29:81.17:1000,81,0	1/1:1,10:11:23.99:293,24,0	1/1:2,24:26:63.20:826,63,0	1/1:0,23:23:63.20:829,63,0	1/1:1,31:32:81.26:1066,81,0	0/0:17,0:17:51.11:0,51,540	0/0:29,0:29:84.21:0,84,902	0/0:32,0:32:93.18:0,93,980	0/0:25,0:25:69.17:0,69,741	0/0:24,0:24:63.09:0,63,639	0/0:15,0:15:45.11:0,45,484	0/0:37,0:37:99:0,111,1171	1/1:0,16:17:51.16:660,51,0	1/1:0,14:14:39.13:507,39,0	1/1:0,34:34:93.30:1222,93,0	1/1:2,15:17:39.13:513,39,0	1/1:4,27:31:81.26:1063,81,0	1/1:4,23:27:63.12:806,63,0	1/1:0,4:4:9.03:118,9,0
chr10	21879193	.	TA	T	9223.33	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=14.658;DP=753;FS=13.246;HRun=2;HaplotypeScore=71.5084;InbreedingCoeff=0.9992;MQ=77.81;MQ0=0;MQRankSum=-6.352;QD=35.47;ReadPosRankSum=1.184;VQSLOD=4.1574;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,144,2108	1/1:0,9:9:27.09:350,27,0	0/0:20,0:20:54.13:0,54,722	0/0:14,0:14:38.62:0,39,536	0/0:13,0:13:36.12:0,36,538	0/0:34,0:34:99:0,102,1470	0/0:39,0:39:99:0,114,1668	1/1:0,29:29:84.26:1077,84,0	1/1:0,30:30:78.25:1011,78,0	0/0:29,0:29:84.28:0,84,1258	0/0:24,0:24:66.22:0,66,986	0/0:30,0:30:90.30:0,90,1349	0/0:28,0:28:84.28:0,84,1236	0/0:33,0:33:96.31:0,96,1419	0/0:25,0:25:75.25:0,75,1124	1/1:0,36:36:99:1285,99,0	1/1:1,32:33:96.31:1246,96,0	1/1:0,35:35:99:1324,102,0	1/1:3,21:24:63.17:788,63,0	1/1:1,22:23:63.20:817,63,0	1/1:1,40:41:99:1324,102,0	0/0:18,0:18:51.15:0,51,724	0/0:15,0:15:45.15:0,45,668	0/0:30,0:30:90.27:0,90,1324	0/0:25,0:25:69.22:0,69,1014	0/0:36,0:36:99:0,105,1536	0/0:25,0:25:75.25:0,75,1124	0/0:7,0:7:21.07:0,21,314
chr10	21879807	.	G	GGA	8912.63	PASS	AB=1.000;AC=33;AF=0.589;AN=56;BaseQRankSum=-4.375;DP=576;FS=21.312;HRun=0;HaplotypeScore=102.4846;InbreedingCoeff=0.9165;MQ=68.47;MQ0=14;MQRankSum=-1.574;QD=24.76;ReadPosRankSum=0.498;VQSLOD=3.9523;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,12:19:34.34:524,34,0	0/0:9,0:9:17.35:0,17,199	0/0:33,0:14:20.54:0,21,302	0/1:53,0:27:4.95:5,0,488	1/1:4,18:24:54.18:900,54,0	1/1:4,26:30:51.09:817,51,0	1/1:5,26:31:47.86:816,48,0	0/0:26,0:26:61.43:0,61,767	0/0:16,0:18:35.31:0,35,467	1/1:7,11:18:39.13:664,39,0	1/1:2,12:14:30.10:509,30,0	1/1:11,4:15:24.08:384,24,0	1/1:5,14:19:24.08:408,24,0	1/1:5,20:25:42.14:707,42,0	0/0:20,0:20:21.07:0,21,273	0/0:19,0:19:33.11:0,33,429	0/0:18,0:18:4.84:0,5,417	0/0:29,0:29:63.67:0,64,816	0/0:20,0:20:42.54:0,43,490	0/0:14,0:14:36.12:0,36,468	0/0:10,0:10:14.71:0,15,195	1/1:8,6:13:24.08:403,24,0	1/1:6,7:13:15.63:282,16,0	1/1:2,16:19:30.10:509,30,0	1/1:5,10:15:18.06:306,18,0	1/1:4,13:17:47.09:688,47,0	1/1:6,12:18:31.32:482,31,0	1/1:0,15:15:30.10:510,30,0
chr10	21880853	.	C	CA	812.55	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-8.189;DP=675;FS=9.371;HRun=8;HaplotypeScore=64.6705;InbreedingCoeff=0.9688;MQ=86.15;MQ0=0;MQRankSum=-3.249;QD=24.62;ReadPosRankSum=2.665;VQSLOD=4.2600;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:90.02:0,90,822	0/0:6,0:6:15:0,15,137	0/0:16,0:16:38.93:0,39,342	0/0:27,0:27:53.59:0,54,469	0/0:32,0:32:90.04:0,90,824	0/0:25,0:25:69.02:0,69,632	0/0:27,0:27:81.03:0,81,736	0/0:35,0:35:81:0,81,731	0/0:30,0:30:87.03:0,87,791	0/0:23,0:23:69.04:0,69,632	0/0:17,0:17:51.03:0,51,467	0/0:20,0:20:51.03:0,51,467	0/0:24,0:24:60:0,60,543	0/0:25,0:25:69.02:0,69,627	0/0:34,0:34:99:0,99,906	1/1:3,30:33:56.78:907,57,0	0/0:20,0:20:50.97:0,51,453	0/0:13,0:13:36:0,36,324	0/0:20,0:20:48.01:0,48,438	0/0:31,0:31:90.03:0,90,819	0/0:25,0:25:60.02:0,60,549	0/0:21,0:21:57.03:0,57,522	0/0:15,0:15:42.02:0,42,383	0/0:34,0:34:90.02:0,90,819	0/0:19,0:19:54.03:0,54,494	0/0:26,0:26:69.03:0,69,632	0/0:31,0:31:81.04:0,81,741	0/0:7,0:7:14.96:0,15,126
chr10	21881050	.	AG	A	2817.86	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-0.053;DP=531;FS=9.794;HRun=8;HaplotypeScore=71.3318;InbreedingCoeff=0.9666;MQ=67.73;MQ0=0;MQRankSum=-1.064;QD=23.68;ReadPosRankSum=3.463;VQSLOD=4.0989;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:60.15:0,60,700	0/0:11,0:11:33.08:0,33,384	0/0:7,0:6:10.58:0,11,113	0/0:12,0:12:14.83:0,15,156	1/1:2,28:30:84.08:801,84,0	0/0:17,0:17:39.12:0,39,469	0/0:15,0:15:36.09:0,36,420	0/0:31,0:31:81.01:0,81,881	0/0:16,0:16:48.11:0,48,537	0/0:14,0:14:33.10:0,33,389	0/0:18,0:18:39.08:0,39,444	0/0:18,0:18:47.91:0,48,532	0/0:7,0:7:18.03:0,18,202	0/0:21,0:21:45.14:0,45,538	0/0:19,0:19:51.14:0,51,604	0/0:18,0:18:51.13:0,51,601	0/0:35,0:35:99:0,99,1196	0/0:20,0:20:60.18:0,60,724	0/0:23,0:23:54.12:0,54,632	0/0:21,0:21:54.15:0,54,632	0/0:13,1:14:10.11:0,10,381	1/1:1,17:18:48.03:454,48,0	0/0:15,0:15:33.10:0,33,395	0/0:17,0:17:40.38:0,40,517	0/0:18,0:18:48.14:0,48,566	1/1:3,30:33:51.07:752,51,0	1/1:2,32:34:90.14:869,90,0	1/1:0,4:4:12.02:116,12,0
chr10	21881269	.	ACTCTCT	A	1936.10	PASS	AB=0.923;AC=40;AF=0.800;AN=50;BaseQRankSum=3.973;DP=472;FS=8.928;HRun=0;HaplotypeScore=171.8188;InbreedingCoeff=0.2627;MQ=75.08;MQ0=12;MQRankSum=-3.864;QD=5.85;ReadPosRankSum=1.573;VQSLOD=2.1045;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:20:9.03:122,9,0	1/1:7,3:10:2.93:60,3,0	0/0:26,0:16:0:0,0,0	0/0:27,0:21:0.47:0,0,2	1/1:14,0:14:16.74:153,17,0	1/1:21,0:21:3.01:42,3,0	./.	0/0:38,0:37:0:0,0,0	1/1:13,4:17:11.98:240,12,0	1/1:12,0:12:2.74:41,3,0	1/1:18,0:18:13.86:165,14,0	1/1:15,0:15:5.38:50,5,0	1/1:12,0:12:9.50:126,10,0	1/1:8,0:8:2.63:37,3,0	0/0:13,0:17:12.99:0,13,245	1/1:13,3:17:12.03:204,12,0	1/1:15,7:20:3.01:60,3,0	./.	0/1:18,0:22:0.16:21,0,0	1/1:23,1:24:3.01:60,3,0	./.	1/1:17,0:17:11.36:107,11,0	1/1:12,0:12:9.01:107,9,0	1/1:14,0:13:9.03:118,9,0	1/1:17,0:17:14.41:172,14,0	0/1:17,0:17:83.53:114,0,84	1/1:9,0:9:1.25:3,1,0	1/1:13,0:13:3.01:42,3,0
chr10	21881290	.	CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTG	C	7533.70	PASS	AB=0.922;AC=24;AF=0.429;AN=56;BaseQRankSum=11.516;DP=527;FS=10.712;HRun=0;HaplotypeScore=314.3855;InbreedingCoeff=0.3927;MQ=50.98;MQ0=17;MQRankSum=-3.956;QD=26.72;ReadPosRankSum=6.536;VQSLOD=1.9641;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:29:49.76:352,0,50	0/0:11,0:11:26.40:0,26,1847	0/0:19,0:6:18.01:0,18,816	0/0:24,0:12:36.11:0,36,1109	1/1:0,18:18:24.08:1803,24,0	0/1:16,0:16:66.75:118,0,67	0/0:12,0:12:12.04:0,12,284	0/0:29,0:27:63.11:0,63,3157	0/0:21,0:21:61.07:0,61,5207	0/1:25,0:25:99:227,0,233	1/1:21,0:21:15.05:566,15,0	1/1:17,0:17:0.63:192,1,0	1/1:17,0:17:9.92:371,10,0	1/1:8,0:8:2.61:121,3,0	0/0:21,0:21:60.21:0,60,5299	0/0:19,0:19:51.17:0,51,3607	0/0:28,0:26:39.84:0,40,2328	0/0:16,0:15:42.14:0,42,3748	0/0:15,0:15:42.13:0,42,3186	0/0:24,0:24:49.21:0,49,2944	0/0:6,0:6:3.01:0,3,213	1/1:0,17:17:12.04:966,12,0	0/1:17,0:17:80.79:372,0,81	1/1:18,0:17:8.87:362,9,0	0/1:23,0:23:22.37:557,0,22	0/1:3,20:23:99:1056,0,287	1/1:1,13:13:3.01:214,3,0	1/1:2,17:18:3.01:257,3,0
chr10	21881296	.	CTCTCTCTCTCTCTCTCTCTCTCTCTG	C	9299.42	PASS	AB=1.000;AC=30;AF=0.536;AN=56;BaseQRankSum=10.918;DP=516;FS=11.708;HRun=0;HaplotypeScore=246.4439;InbreedingCoeff=0.6956;MQ=51.24;MQ0=21;MQRankSum=-3.953;QD=32.18;ReadPosRankSum=6.219;VQSLOD=1.7842;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:1,24:25:12.04:713,12,0	0/0:10,0:10:23.24:0,23,1205	0/0:30,0:10:29.45:0,29,620	0/0:26,0:11:32.38:0,32,548	1/1:18,0:18:24.08:1296,24,0	1/1:0,17:17:3.01:215,3,0	0/1:13,0:13:17.98:61,0,18	0/0:24,0:21:51.17:0,51,2315	0/0:21,0:21:60.66:0,61,3721	1/1:1,21:22:47.09:608,47,0	1/1:0,22:22:15.05:1022,15,0	1/1:1,16:17:9.78:397,10,0	1/1:1,17:18:9.92:646,10,0	1/1:0,8:8:2.34:210,2,0	0/0:19,0:19:54.19:0,54,3797	0/0:19,0:19:51.13:0,51,2574	0/0:27,0:25:36.42:0,36,1626	0/0:15,0:14:42.10:0,42,2707	0/0:11,0:11:33.11:0,33,2188	0/0:20,0:20:41.87:0,42,1969	0/0:5,0:5:3.01:0,3,135	1/1:17,0:17:12.04:712,12,0	1/1:2,12:14:9.50:605,10,0	1/1:3,16:19:9.03:636,9,0	1/1:0,25:25:18.06:1102,18,0	0/1:22,0:22:99:734,0,238	1/1:14,0:13:3.01:150,3,0	1/1:18,0:17:3.01:194,3,0
chr10	21881499	.	CCGTTTTAGGAGATTAAAAATCAAGGCTATTCTACTTATTGAGATAGGAAATGAAA	C	1817.53	PASS	AC=20;AF=0.455;AN=44;BaseQRankSum=3.282;DP=397;FS=7.764;HRun=0;HaplotypeScore=498.0951;InbreedingCoeff=0.7318;MQ=97.42;MQ0=0;MQRankSum=-3.107;QD=17.48;ReadPosRankSum=-2.133;VQSLOD=-0.4601;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:18:3.01:114,3,0	0/0:7,0:7:21.07:0,21,3549	0/0:26,0:26:75.26:0,75,4272	0/0:19,0:19:57.20:0,57,3244	1/1:10,0:10:3.01:65,3,0	1/1:12,0:12:6.01:88,6,0	1/1:10,0:10:3.01:119,3,0	0/0:30,0:30:87.30:0,87,6911	0/0:16,0:16:45.15:0,45,6089	1/1:11,0:11:6.01:55,6,0	./.	./.	./.	1/1:4,2:6:3.01:416,3,0	0/0:23,0:23:66.23:0,66,10526	0/0:21,0:21:60.21:0,60,9353	0/0:46,0:46:99:0,132,19747	0/0:20,0:20:51.18:0,51,7959	0/0:16,0:16:48.16:0,48,5801	0/0:27,0:27:78.27:0,78,11459	0/0:13,0:13:36.12:0,36,5522	1/1:8,0:8:6.02:196,6,0	1/1:12,0:12:6.01:113,6,0	./.	1/1:8,1:9:3.01:395,3,0	./.	1/1:4,4:8:3.01:416,3,0	./.
chr10	21881500	.	CG	C	253.83	PASS	AC=20;AF=0.455;AN=44;BaseQRankSum=4.298;DP=294;FS=7.721;HRun=1;HaplotypeScore=43.9277;InbreedingCoeff=0.7301;MQ=113.81;MQ0=0;MQRankSum=-2.561;QD=10.58;ReadPosRankSum=-2.232;VQSLOD=0.3243;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,5:5:3.01:42,3,0	0/0:7,0:7:21.07:0,21,333	0/0:26,0:26:78.24:0,78,1175	0/0:21,0:21:60.09:0,60,865	1/1:1,0:1:2.98:21,3,0	1/1:2,0:2:5.97:46,6,0	1/1:0,2:2:3.01:42,3,0	0/0:31,0:31:90.27:0,90,1347	0/0:15,0:15:45.14:0,45,693	1/1:2,0:2:6.01:55,6,0	./.	./.	./.	1/1:2,0:2:2.50:9,2,0	0/0:23,0:23:66.16:0,66,997	0/0:21,0:21:60.10:0,60,901	0/0:45,0:45:99:0,132,2023	0/0:20,0:20:51.17:0,51,808	0/0:16,0:16:48.15:0,48,737	0/0:28,0:28:81.19:0,81,1208	0/0:13,0:13:39.07:0,39,570	1/1:0,3:3:6.02:84,6,0	1/1:2,0:2:6.01:65,6,0	./.	1/1:1,0:1:3.01:39,3,0	./.	1/1:4,0:4:2.50:9,2,0	./.
chr10	21882100	.	TACACACACACAC	T	5434.40	PASS	AB=0.717;AC=22;AF=0.423;AN=52;BaseQRankSum=10.284;DP=634;FS=8.271;HRun=0;HaplotypeScore=200.0275;InbreedingCoeff=0.7546;MQ=62.78;MQ0=5;MQRankSum=-10.170;QD=17.20;ReadPosRankSum=-1.026;VQSLOD=2.8793;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:49:21.94:528,22,0	0/0:2,0:3:6.02:0,6,266	./.	./.	0/0:14,0:21:24.08:0,24,914	1/1:9,8:17:18.06:553,18,0	1/1:23,6:30:15.05:465,15,0	0/0:19,0:19:11.40:0,11,274	0/0:17,0:22:45.14:0,45,1881	1/1:20,7:27:15.04:423,15,0	0/1:8,8:16:12.93:258,0,13	1/1:12,12:26:26.07:851,26,0	1/1:20,9:31:21.07:683,21,0	1/1:15,7:22:6.02:205,6,0	1/1:8,10:18:18.06:618,18,0	0/0:20,0:20:42.14:0,42,2196	0/0:29,0:29:45.15:0,45,2107	0/0:21,0:21:33.11:0,33,1604	0/0:13,0:13:6.02:0,6,322	0/0:14,0:14:18.06:0,18,901	0/0:28,0:28:44.83:0,45,2026	0/0:12,0:13:21.03:0,21,532	1/1:13,5:18:5.23:109,5,0	0/1:23,9:33:7.68:311,0,8	1/1:14,14:29:15.05:431,15,0	0/0:22,0:28:63.22:0,63,2568	0/0:13,0:19:12.04:0,12,510	0/0:5,0:5:6.02:0,6,298
chr10	21883096	.	G	GT	678.48	PASS	AB=0.954;AC=5;AF=0.089;AN=56;BaseQRankSum=-6.199;DP=605;FS=0.703;HRun=9;HaplotypeScore=133.6862;InbreedingCoeff=0.3755;MQ=66.66;MQ0=0;MQRankSum=2.445;QD=10.94;ReadPosRankSum=1.367;VQSLOD=2.1106;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:38.97:0,39,338	0/0:8,0:8:24:0,24,208	0/0:17,0:16:38.82:0,39,316	0/1:8,0:8:3.10:3,0,37	0/0:34,0:34:74.97:0,75,647	0/0:30,0:30:59.99:0,60,522	0/0:14,0:14:26.97:0,27,231	0/0:25,0:25:40.44:0,40,495	0/0:18,0:19:56.01:0,56,471	0/0:31,1:32:47.82:0,48,648	0/0:26,0:26:65.98:0,66,573	0/0:20,0:20:47.72:0,48,398	0/0:28,0:28:65.40:0,65,564	0/0:18,0:18:29.94:0,30,255	1/1:3,23:27:69.02:744,69,0	0/0:17,0:17:50.96:0,51,436	0/0:28,0:28:59.97:0,60,521	0/0:22,0:22:53.95:0,54,462	0/0:20,0:20:53.33:0,53,445	0/0:33,0:33:89.94:0,90,776	0/0:13,0:13:9.24:0,9,209	0/0:21,0:21:41.97:0,42,360	0/0:17,0:17:35.86:0,36,311	0/1:11,1:12:36.32:36,0,180	0/0:23,0:23:59.99:0,60,520	0/0:23,0:23:50.93:0,51,455	0/0:33,0:33:61.99:0,62,519	0/1:14,1:15:9.18:9,0,157
chr10	21883130	.	T	TATC	10539.27	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=16.602;DP=605;FS=0.753;HRun=0;HaplotypeScore=149.0347;InbreedingCoeff=0.9870;MQ=66.35;MQ0=0;MQRankSum=-16.784;QD=29.60;ReadPosRankSum=2.899;VQSLOD=5.2323;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,13:21:36.12:633,36,0	0/0:11,0:11:33.08:0,33,457	0/0:16,0:16:33.08:0,33,439	0/0:21,0:21:51.16:0,51,721	1/1:9,0:30:24.98:235,25,0	1/1:3,26:30:48.16:933,48,0	1/1:4,12:16:27.09:526,27,0	0/0:30,0:30:60.18:0,60,853	0/0:21,0:21:63.19:0,63,913	1/1:9,21:30:72.24:1401,72,0	1/1:5,14:19:36.12:675,36,0	1/1:5,18:24:42.14:831,42,0	1/1:7,19:28:54.14:1026,54,0	1/1:4,15:20:36.12:680,36,0	0/0:19,0:19:39.12:0,39,571	0/0:15,0:15:42.14:0,42,620	0/0:23,0:23:57.13:0,57,816	0/0:18,0:18:36.12:0,36,539	0/0:27,0:26:63.20:0,63,937	0/0:35,0:35:90.30:0,90,1350	0/0:13,0:13:36.10:0,36,507	1/1:5,0:20:31.39:301,31,0	1/1:3,19:23:39.13:794,39,0	1/1:2,6:10:12.04:245,12,0	1/1:7,13:21:36.12:733,36,0	1/1:5,1:24:69.04:848,69,0	1/1:6,0:31:44.93:560,45,0	1/1:1,0:8:9.03:119,9,0
chr10	21883996	.	CTT	C	7696.98	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=-7.753;DP=550;FS=2.176;HRun=11;HaplotypeScore=102.8580;InbreedingCoeff=0.9596;MQ=72.13;MQ0=2;MQRankSum=1.340;QD=23.61;ReadPosRankSum=3.757;VQSLOD=4.7413;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,33:36:84.16:948,84,0	0/0:3,0:8:13.57:0,14,89	0/0:18,0:17:26.29:0,26,290	0/0:19,0:16:1.20:0,1,325	1/1:1,21:22:54.02:557,54,0	1/1:3,12:15:24.03:255,24,0	1/1:0,26:26:60.15:637,60,0	0/0:3,0:20:40.13:0,40,149	0/0:1,0:12:24.95:0,25,86	1/1:8,20:28:53.32:571,53,0	1/1:2,18:20:48.09:505,48,0	1/1:2,11:13:14.72:157,15,0	1/1:1,23:24:60.15:638,60,0	1/1:2,19:21:48.11:511,48,0	0/0:2,0:13:18.03:0,18,172	0/0:2,0:20:34.93:0,35,120	0/0:7,0:28:48.44:0,48,236	0/0:3,0:23:40.76:0,41,155	0/0:4,1:22:19.49:0,19,189	0/0:5,0:18:36.45:0,36,208	0/0:0,0:21:39.93:0,40,137	1/1:2,10:12:27.05:287,27,0	1/1:2,13:17:29.27:353,29,0	1/1:1,23:24:51.13:543,51,0	1/1:2,18:20:48.11:511,48,0	1/1:1,12:13:36.07:371,36,0	1/1:2,21:23:57.09:597,57,0	1/1:1,11:12:24.06:255,24,0
chr10	21884691	.	A	ATATATATG	5052.29	PASS	AB=0.701;AC=29;AF=0.518;AN=56;BaseQRankSum=5.176;DP=712;FS=6.014;HRun=0;HaplotypeScore=226.7419;InbreedingCoeff=-0.1087;MQ=47.18;MQ0=6;MQRankSum=-4.947;QD=8.38;ReadPosRankSum=-1.211;VQSLOD=2.8865;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:3,20:36:0.07:0,0,0	0/0:6,0:13:2.10:0,2,366	0/0:27,0:11:29.87:0,30,414	0/0:18,0:10:16.94:0,17,273	0/1:31,0:31:31.01:56,0,31	1/1:3,18:24:12.04:459,12,0	1/1:2,12:18:2.97:135,3,0	0/1:59,0:56:99:118,0,1463	0/1:7,0:31:99:158,0,225	1/1:6,27:42:71.10:2304,71,0	0/1:0,25:31:0:0,0,0	1/1:0,14:18:2.95:135,3,0	1/1:1,12:16:6.49:206,6,0	0/1:6,9:18:0.09:0,0,0	0/1:5,0:29:63.27:63,0,132	0/1:4,0:17:62.24:62,0,176	0/1:5,0:17:53.56:89,0,54	0/1:7,0:27:99:322,0,209	0/1:5,0:24:99:467,0,385	0/1:4,0:27:35.74:36,0,141	0/0:5,0:16:5.74:0,6,129	0/0:17,0:17:8.29:0,8,65	1/1:2,17:22:2.76:72,3,0	0/0:2,14:18:0.89:0,1,2	1/1:2,29:38:2.98:32,3,0	0/1:26,1:24:99:199,0,191	0/1:43,0:39:99:133,0,224	0/1:8,0:8:6.92:7,0,17
chr10	21886465	.	CA	C	5299.91	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=4.293;DP=683;FS=1.386;HRun=8;HaplotypeScore=76.7026;InbreedingCoeff=0.9993;MQ=79.02;MQ0=0;MQRankSum=-2.036;QD=24.88;ReadPosRankSum=1.046;VQSLOD=5.5792;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,123,1411	1/1:1,12:13:33.05:318,33,0	0/0:27,0:27:66.04:0,66,729	0/0:17,0:17:41.57:0,42,432	0/0:22,1:23:34.22:0,34,694	0/0:21,0:22:60.11:0,60,696	0/0:32,0:32:84.22:0,84,981	1/1:4,29:33:83.92:754,84,0	1/1:1,25:26:75.12:724,75,0	0/0:24,0:24:60.18:0,60,724	0/0:17,0:17:45.14:0,45,543	0/0:23,0:23:66.18:0,66,777	0/0:29,0:30:90.12:0,90,1039	0/0:29,1:30:58.29:0,58,983	0/0:24,0:24:72.15:0,72,820	1/1:1,28:29:72.12:695,72,0	1/1:1,20:21:57.09:550,57,0	1/1:1,18:19:39.06:376,39,0	1/1:0,18:18:50.90:472,51,0	1/1:2,24:26:72.06:686,72,0	1/1:0,28:28:75.12:724,75,0	0/0:26,0:26:66.19:0,66,785	0/0:22,0:22:63.17:0,63,738	0/0:27,0:27:78.13:0,78,907	0/0:25,0:25:69.21:0,69,833	0/0:35,0:35:96.20:0,96,1130	0/0:17,0:17:51.15:0,51,605	0/0:7,0:7:21.04:0,21,238
chr10	21887675	.	CG	C	6568.69	PASS	AB=1.000;AC=50;AF=0.893;AN=56;BaseQRankSum=7.244;DP=402;FS=14.204;HRun=1;HaplotypeScore=163.8468;InbreedingCoeff=-0.0958;MQ=67.95;MQ0=0;MQRankSum=-3.833;QD=16.34;ReadPosRankSum=7.627;VQSLOD=3.4131;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:7,0:7:27.04:45,0,27	1/1:7,0:7:20.80:145,21,0	1/1:9,0:9:7.25:123,7,0	0/1:14,0:14:67.74:68,0,158	1/1:3,29:32:73.23:496,73,0	1/1:15,0:14:38.35:266,38,0	0/1:10,0:10:1.20:120,0,1	1/1:22,0:22:61.69:384,62,0	1/1:9,0:9:23.52:150,24,0	1/1:29,0:29:42.33:501,42,0	1/1:19,0:17:28.55:255,29,0	1/1:13,0:13:21.70:215,22,0	1/1:12,1:13:35.68:264,36,0	1/1:14,0:13:21.76:224,22,0	1/1:6,0:6:11.71:77,12,0	1/1:10,0:10:15.46:165,15,0	1/1:7,0:7:2.87:89,3,0	1/1:4,0:4:11.85:79,12,0	0/1:9,0:8:9.51:87,0,10	1/1:19,0:19:53.69:408,54,0	0/1:4,0:4:10.52:11,0,21	1/1:1,27:28:79.83:538,80,0	1/1:17,0:17:41.36:291,41,0	0/1:12,0:12:29.32:103,0,29	1/1:17,0:17:50.46:353,50,0	1/1:5,17:22:53.85:441,54,0	1/1:1,24:25:68.50:502,68,0	1/1:1,8:9:20.94:168,21,0
chr10	21887682	.	C	CGA	4118.68	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=5.085;DP=398;FS=42.941;HRun=0;HaplotypeScore=190.2854;InbreedingCoeff=0.9350;MQ=62.07;MQ0=0;MQRankSum=-2.218;QD=39.60;ReadPosRankSum=4.769;VQSLOD=0.7169;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:12.04:0,12,188	0/0:8,0:8:24.08:0,24,378	0/0:9,0:9:27.06:0,27,405	0/0:8,0:10:17.29:0,17,273	1/1:1,28:29:77.63:980,78,0	0/0:13,0:13:38.96:0,39,567	0/0:9,0:9:27.09:0,27,412	0/0:25,0:25:72.21:0,72,1107	0/0:11,0:11:30.10:0,30,458	0/0:29,0:29:84.25:0,84,1301	0/0:21,0:19:51.17:0,51,756	0/0:13,0:13:33.11:0,33,516	0/0:14,0:14:42.14:0,42,613	0/0:13,0:12:33.11:0,33,513	0/0:5,0:5:15.05:0,15,233	0/0:11,0:11:30.10:0,30,464	0/0:7,0:7:15.05:0,15,234	0/0:4,0:4:12.04:0,12,190	0/0:10,0:9:24.55:0,25,377	0/0:21,0:21:60.20:0,60,925	0/0:4,0:4:3.01:0,3,48	1/1:0,27:27:81.26:1088,81,0	0/0:16,0:16:45.14:0,45,676	0/0:11,0:11:24.08:0,24,361	0/0:20,0:20:57.19:0,57,896	1/1:0,16:16:48.16:735,48,0	1/1:0,24:24:69.23:994,69,0	1/1:0,8:8:21.07:322,21,0
chr10	21887747	.	AG	A	6402.62	PASS	AB=0.866;AC=46;AF=0.821;AN=56;BaseQRankSum=-11.053;DP=317;FS=27.605;HRun=2;HaplotypeScore=147.3560;InbreedingCoeff=0.4318;MQ=59.36;MQ0=1;MQRankSum=-0.073;QD=23.11;ReadPosRankSum=-4.342;VQSLOD=1.9977;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:0,7:7:15.04:171,15,0	1/1:0,4:4:12.03:137,12,0	0/1:10,3:7:0.90:153,0,1	0/1:15,1:9:4.63:92,0,5	0/1:20,3:23:34.91:40,0,35	1/1:1,6:7:18.05:205,18,0	1/1:1,3:4:9.03:103,9,0	1/1:4,21:25:63.18:719,63,0	1/1:0,10:10:30.09:342,30,0	1/1:1,22:23:66.19:753,66,0	1/1:2,16:18:42.12:478,42,0	1/1:1,7:8:21.06:239,21,0	1/1:0,5:5:15.04:171,15,0	1/1:1,7:8:21.06:239,21,0	1/1:0,3:3:9.03:103,9,0	1/1:2,7:9:21.06:239,21,0	1/1:0,10:10:27.08:308,27,0	1/1:0,5:5:12.03:137,12,0	1/1:3,17:20:51.15:582,51,0	1/1:2,13:15:39.11:444,39,0	1/1:0,1:1:3.01:34,3,0	0/0:11,0:11:13.38:0,13,39	1/1:0,7:7:15.04:171,15,0	1/1:1,3:4:6.02:68,6,0	1/1:2,11:13:33.09:376,33,0	0/1:15,4:19:31.59:100,0,32	0/0:26,0:26:39.82:0,40,115	0/0:3,0:3:3.85:0,4,11
chr10	21887748	.	G	GCTAAACGA	7724.41	PASS	AB=1.000;AC=16;AF=0.286;AN=56;BaseQRankSum=-8.878;DP=283;FS=31.125;HRun=0;HaplotypeScore=166.8136;InbreedingCoeff=0.3735;MQ=61.88;MQ0=2;MQRankSum=-1.223;QD=54.78;ReadPosRankSum=0.170;VQSLOD=2.9283;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:7,0:7:19.11:19,0,138	0/0:4,0:4:12.04:0,12,165	0/1:14,0:7:5.95:6,0,165	0/1:17,0:9:51.37:51,0,54	1/1:3,13:16:42.14:1628,42,0	0/0:6,0:6:18.04:0,18,228	0/0:3,0:3:9.03:0,9,123	0/1:24,0:24:15.24:15,0,543	0/0:10,0:10:30.05:0,30,387	0/0:22,0:22:66.21:0,66,843	0/0:17,0:17:41.90:0,42,534	0/0:7,0:7:21.07:0,21,275	0/0:5,0:5:15.03:0,15,183	0/0:7,0:7:21.07:0,21,288	0/0:3,0:3:9.03:0,9,119	0/1:7,0:7:13.11:13,0,223	0/1:10,0:10:8.87:9,0,265	0/0:5,0:5:12.04:0,12,157	0/0:18,0:18:1.68:0,2,463	0/0:13,0:13:4.91:0,5,436	0/0:1,0:1:2.96:0,3,19	1/1:0,7:7:21.07:949,21,0	0/0:7,0:7:14.96:0,15,183	0/0:3,0:3:5.84:0,6,33	0/0:11,0:11:32.95:0,33,383	1/1:4,12:16:48.16:2061,48,0	1/1:0,20:20:60.21:2701,60,0	1/1:0,2:2:6.02:272,6,0
chr10	21887769	.	AG	A	7273.80	PASS	AB=0.954;AC=48;AF=0.960;AN=50;BaseQRankSum=-1.337;DP=307;FS=1.349;HRun=2;HaplotypeScore=107.2304;InbreedingCoeff=0.0446;MQ=57.99;MQ0=12;MQRankSum=-1.728;QD=24.01;ReadPosRankSum=3.222;VQSLOD=4.7268;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,6:7:15.05:194,15,0	1/1:1,5:5:12.04:155,12,0	0/1:44,5:11:99:162,0,119	0/1:35,0:10:7.16:7,0,128	1/1:1,16:16:48.16:621,48,0	1/1:0,4:4:12.04:155,12,0	1/1:1,2:3:6.02:78,6,0	1/1:2,15:16:42.14:545,42,0	1/1:1,7:8:21.07:272,21,0	1/1:8,12:20:36.12:466,36,0	1/1:3,11:14:33.10:415,33,0	1/1:0,8:7:21.07:272,21,0	1/1:0,4:4:12.04:155,12,0	1/1:2,4:6:12.04:155,12,0	./.	1/1:0,8:7:21.07:272,21,0	1/1:4,7:11:23.87:267,24,0	1/1:0,5:5:15.05:194,15,0	1/1:4,10:13:33.11:424,33,0	1/1:0,7:7:21.07:272,21,0	./.	1/1:0,6:6:18.06:233,18,0	1/1:0,4:4:12.04:155,12,0	./.	1/1:0,9:9:27.09:350,27,0	1/1:0,16:16:48.15:617,48,0	1/1:1,21:22:63.16:797,63,0	1/1:2,1:2:3.01:39,3,0
chr10	21887955	.	T	TAA	5225.60	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-4.848;DP=601;FS=13.681;HRun=7;HaplotypeScore=90.9254;InbreedingCoeff=0.9841;MQ=79.53;MQ0=0;MQRankSum=-5.222;QD=39.29;ReadPosRankSum=1.624;VQSLOD=3.5386;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,105,1210	0/0:3,0:3:9.03:0,9,105	0/0:19,0:19:45.07:0,45,500	0/0:18,0:18:42.11:0,42,487	1/1:2,23:26:57.06:837,57,0	0/0:25,0:24:54.11:0,54,614	0/0:25,0:25:66.19:0,66,769	0/0:39,0:39:96.11:0,96,1058	0/0:15,0:15:42.12:0,42,489	0/0:27,0:27:63.18:0,63,726	0/0:23,0:23:51.14:0,51,594	0/0:31,0:30:87.23:0,87,993	0/0:6,0:6:18.05:0,18,210	0/0:19,0:19:51.15:0,51,594	0/0:15,0:15:45.13:0,45,524	0/0:17,0:16:45.13:0,45,524	0/0:37,0:37:99:0,105,1211	0/0:19,0:19:51.14:0,51,594	0/0:13,0:13:39.10:0,39,443	0/0:18,0:18:39.09:0,39,454	0/0:10,0:10:27.08:0,27,315	1/1:3,29:32:81.19:1269,81,0	0/0:11,0:11:27.08:0,27,314	0/0:23,0:23:66.20:0,66,769	0/0:20,0:20:60.16:0,60,688	1/1:4,27:32:46.35:1242,46,0	1/1:3,27:31:83.77:1336,84,0	1/1:0,11:11:33.11:542,33,0
chr10	21888817	.	T	TTTCC	11295.84	PASS	AB=0.831;AC=43;AF=0.768;AN=56;BaseQRankSum=-1.697;DP=657;FS=8.337;HRun=0;HaplotypeScore=116.2040;InbreedingCoeff=0.3448;MQ=59.50;MQ0=7;MQRankSum=2.336;QD=20.03;ReadPosRankSum=1.945;VQSLOD=4.1356;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,6:20:18.06:424,18,0	1/1:4,2:6:15.04:289,15,0	0/0:20,0:12:2.04:0,2,6	0/0:19,0:15:0.47:0,0,1	0/0:26,0:26:33.09:0,33,471	1/1:14,0:14:9.02:110,9,0	1/1:22,1:23:1.08:359,1,0	1/1:39,0:37:9.42:79,9,0	1/1:16,9:27:21.07:452,21,0	0/1:22,4:26:18.42:391,0,18	1/1:16,4:20:15.74:480,16,0	1/1:15,2:17:30.04:474,30,0	0/1:21,7:28:12.46:777,0,12	1/1:16,3:18:21.02:394,21,0	1/1:25,0:24:51.02:815,51,0	1/1:18,6:24:51.05:878,51,0	1/1:10,10:20:15.05:353,15,0	1/1:8,0:8:9.03:212,9,0	1/1:23,3:24:9.03:212,9,0	1/1:22,7:29:30.08:616,30,0	0/1:26,9:35:31.07:716,0,31	0/0:26,0:28:45.05:0,45,570	1/1:15,8:23:29.97:602,30,0	0/1:31,3:33:13.58:487,0,14	0/1:22,9:31:1.66:764,0,2	1/1:22,0:27:45.05:680,45,0	1/1:21,1:24:30.05:477,30,0	1/1:10,0:17:17.42:253,17,0
chr10	21888857	.	C	CTTCT	6441.52	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=0.934;DP=585;FS=3.084;HRun=0;HaplotypeScore=135.1755;InbreedingCoeff=-0.5653;MQ=56.38;MQ0=10;MQRankSum=3.234;QD=14.25;ReadPosRankSum=3.180;VQSLOD=4.6027;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:20:99:233,0,156	0/1:10,0:10:99:137,0,102	0/0:19,0:13:26.76:0,27,218	0/0:20,0:8:3.84:0,4,44	0/0:28,0:28:74.87:0,75,956	0/0:16,0:15:29.85:0,30,244	0/1:21,0:21:99:161,0,256	0/0:25,0:22:41.35:0,41,477	0/1:18,0:18:99:250,0,100	0/1:17,0:17:99:189,0,152	0/1:20,0:20:99:233,0,167	0/1:17,0:17:99:169,0,117	0/1:27,0:27:99:437,0,246	0/1:18,0:17:99:182,0,154	1/1:13,12:24:72.01:1373,72,0	0/1:26,0:26:99:429,0,99	0/1:15,0:15:48.90:210,0,49	0/1:9,0:9:80.92:114,0,81	0/1:18,0:16:98.21:98,0,229	0/1:27,0:27:99:317,0,259	0/1:28,0:28:99:385,0,303	0/0:23,0:23:63.06:0,63,908	0/1:18,0:18:45.88:348,0,46	0/1:31,0:28:99:170,0,320	0/1:23,0:23:99:443,0,161	0/1:21,0:21:84.11:278,0,84	0/1:26,0:26:99:209,0,164	0/1:13,0:13:75.20:75,0,90
chr10	21888871	.	C	CCTTT	7538.93	PASS	AB=0.852;AC=21;AF=0.375;AN=56;BaseQRankSum=-0.918;DP=588;FS=14.986;HRun=0;HaplotypeScore=134.4942;InbreedingCoeff=0.9244;MQ=55.53;MQ0=9;MQRankSum=2.074;QD=33.81;ReadPosRankSum=-1.835;VQSLOD=3.9139;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:19,4:21:6.14:458,0,6	0/0:8,0:9:21.07:0,21,339	0/0:26,0:13:8.96:0,9,146	0/0:34,0:10:17.44:0,17,146	0/0:29,0:29:59.41:0,59,915	1/1:13,3:15:39.10:901,39,0	1/1:10,6:16:39.07:727,39,0	0/0:25,0:23:38.37:0,38,558	0/0:17,0:16:33.06:0,33,458	1/1:11,4:15:29.75:529,30,0	1/1:21,4:25:53.76:806,54,0	1/1:11,2:13:31.56:569,32,0	1/1:20,6:26:54.08:1036,54,0	1/1:13,3:15:33.06:716,33,0	0/0:20,0:19:39.06:0,39,574	0/0:21,0:22:51.16:0,51,792	0/0:18,0:16:24.05:0,24,337	0/0:10,0:10:15.05:0,15,237	0/0:18,0:16:27.02:0,27,354	0/0:27,0:28:56.31:0,56,878	0/0:29,0:29:50.46:0,50,714	0/0:18,0:18:36.10:0,36,558	1/1:17,4:21:35.63:432,36,0	1/1:30,0:27:66.38:473,66,0	1/1:20,1:22:51.08:892,51,0	0/0:21,0:20:32.99:0,33,477	0/0:28,0:27:50.91:0,51,704	0/0:13,0:13:17.97:0,18,226
chr10	21888884	.	C	CTT	3750.76	PASS	AB=0.969;AC=12;AF=0.214;AN=56;BaseQRankSum=4.539;DP=601;FS=19.776;HRun=3;HaplotypeScore=123.9206;InbreedingCoeff=-0.0806;MQ=54.84;MQ0=14;MQRankSum=0.419;QD=16.60;ReadPosRankSum=3.344;VQSLOD=0.0285;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:20,0:18:52.31:142,0,52	0/0:7,0:7:20.90:0,21,288	0/0:30,0:9:23.09:0,23,194	0/0:44,0:14:1.47:0,1,191	0/0:34,0:34:73.96:0,74,985	0/1:17,1:17:43.41:304,0,43	0/1:17,0:17:99:249,0,132	0/0:28,0:26:68.55:0,69,911	0/0:15,0:14:36.07:0,36,464	0/1:18,0:18:99:190,0,148	0/1:21,2:23:99:293,0,187	0/1:12,0:12:41.06:169,0,41	0/1:24,2:25:29.22:388,0,29	0/1:17,1:17:69.19:257,0,69	0/0:20,0:19:54.13:0,54,741	0/0:21,0:21:54.17:0,54,798	0/0:17,0:15:33.03:0,33,439	0/0:8,0:8:14.88:0,15,197	0/0:14,0:13:30.03:0,30,372	0/0:27,0:27:62.62:0,63,898	0/0:32,0:32:31.99:0,32,866	0/0:20,0:20:45.13:0,45,639	0/1:18,1:19:99:206,0,229	1/1:10,20:27:69.99:1195,70,0	0/1:25,0:25:99:358,0,116	0/0:17,0:17:22.34:0,22,565	0/0:28,0:27:28.57:0,29,741	0/0:13,0:13:17.64:0,18,184
chr10	21888941	.	T	TTC	12485.08	PASS	AB=0.635;AC=45;AF=0.804;AN=56;BaseQRankSum=-3.600;DP=669;FS=16.182;HRun=0;HaplotypeScore=102.8889;InbreedingCoeff=0.1642;MQ=51.35;MQ0=15;MQRankSum=-1.359;QD=22.62;ReadPosRankSum=3.817;VQSLOD=4.7153;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,14:18:24.08:390,24,0	1/1:2,7:9:21.06:320,21,0	0/0:49,0:14:14.02:0,14,202	0/0:67,0:14:32.88:0,33,325	0/1:17,1:27:41.19:284,0,41	1/1:3,14:17:27.09:442,27,0	1/1:9,8:16:36.11:551,36,0	1/1:10,13:23:39.11:559,39,0	1/1:7,19:25:16.89:790,17,0	1/1:1,19:20:57.17:907,57,0	1/1:5,12:17:30.10:489,30,0	0/1:6,11:17:44.19:362,0,44	1/1:5,23:27:7.87:650,8,0	1/1:3,13:17:36.12:588,36,0	1/1:2,21:23:45.15:735,45,0	1/1:4,12:17:30.10:491,30,0	0/1:7,20:26:69.42:497,0,69	0/1:4,16:20:44.29:363,0,44	0/1:10,4:14:21.35:183,0,21	1/1:8,14:22:45.10:702,45,0	0/1:7,17:23:7.09:397,0,7	1/1:2,1:26:7.62:307,8,0	1/1:8,15:22:30.92:493,31,0	0/1:11,18:29:34.40:447,0,34	1/1:7,19:26:10.99:700,11,0	1/1:5,1:22:2.50:286,3,0	1/1:9,2:31:48.01:465,48,0	1/1:2,0:5:11.22:86,11,0
chr10	21888978	.	CCTTTCTTT	C	250.41	PASS	AB=0.977;AC=15;AF=0.300;AN=50;BaseQRankSum=-3.391;DP=586;FS=0.000;HRun=0;HaplotypeScore=189.0962;InbreedingCoeff=-0.2741;MQ=49.44;MQ0=19;MQRankSum=0.058;QD=0.81;ReadPosRankSum=-8.098;VQSLOD=0.4314;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:6:0,6,120	0/0:12,0:12:3.03:0,3,54	./.	./.	0/0:26,0:23:21.02:0,21,243	0/1:16,0:15:7.14:7,0,33	0/0:14,0:7:0:0,0,0	./.	0/1:29,0:29:9.03:43,0,9	0/1:26,0:26:17.98:18,0,629	0/1:19,2:20:21.45:21,0,487	0/1:16,0:16:37.93:38,0,260	0/1:29,0:29:99:103,0,358	0/1:19,0:18:13.91:14,0,585	0/0:22,0:23:14.98:0,15,284	0/0:18,0:18:13.26:0,13,44	0/1:29,0:29:13.25:13,0,88	0/0:23,0:21:5.64:0,6,35	0/1:18,0:15:14.53:16,0,15	0/1:18,0:18:3.45:3,0,24	1/1:8,0:8:2.91:19,3,0	0/1:24,1:25:48.05:48,0,190	0/1:20,4:24:24.44:24,0,477	0/0:27,0:26:7.57:0,8,558	0/1:29,0:29:20.85:21,0,953	0/0:20,0:19:21.05:0,21,476	0/0:32,0:28:24.03:0,24,381	0/0:11,0:10:12.01:0,12,311
chr10	21888982	.	T	TCTTC	4494.64	PASS	AB=0.996;AC=29;AF=0.518;AN=56;BaseQRankSum=-1.731;DP=578;FS=18.571;HRun=0;HaplotypeScore=137.2023;InbreedingCoeff=-0.3990;MQ=48.27;MQ0=23;MQRankSum=0.860;QD=8.74;ReadPosRankSum=0.646;VQSLOD=3.1156;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:14,1:14:29.76:297,30,0	0/1:12,0:12:58.22:58,0,160	0/0:15,0:2:3.79:0,4,18	0/0:16,0:3:5.91:0,6,38	1/1:4,25:27:37.20:408,37,0	1/1:16,0:15:32.89:325,33,0	1/1:14,0:7:14.27:110,14,0	0/0:14,0:6:16.82:0,17,92	0/1:29,0:29:99:211,0,335	0/1:24,1:24:85.29:329,0,85	0/1:21,0:20:82.59:83,0,154	0/1:17,0:17:81.60:133,0,82	0/1:30,0:30:99:220,0,173	0/1:18,0:17:99:106,0,139	1/1:22,1:23:34.56:450,35,0	0/0:17,0:17:37.88:0,38,297	0/1:29,0:29:99:156,0,327	0/1:24,0:22:89.91:90,0,242	0/1:19,0:14:56.68:57,0,121	0/1:18,0:18:54.54:55,0,250	0/1:8,0:8:18.81:19,0,123	0/1:25,0:25:86.40:274,0,86	0/1:23,0:23:82.56:105,0,83	0/1:26,0:25:99:144,0,120	0/1:28,0:28:99:230,0,187	0/1:22,0:21:99:303,0,157	0/1:30,1:27:99:173,0,310	0/1:11,0:9:19.40:157,0,19
chr10	21888983	.	CTTT	C	810.89	PASS	AB=0.850;AC=9;AF=0.161;AN=56;BaseQRankSum=-1.152;DP=573;FS=5.174;HRun=3;HaplotypeScore=139.6415;InbreedingCoeff=-0.1932;MQ=48.27;MQ0=22;MQRankSum=0.891;QD=4.74;ReadPosRankSum=-0.648;VQSLOD=-0.6170;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:14:25.95:0,26,365	0/1:8,4:12:47.91:100,0,48	0/1:15,0:2:7.44:7,0,32	0/0:13,0:3:6.02:0,6,77	0/0:29,0:26:24.10:0,24,302	0/0:12,0:15:8.59:0,9,242	0/0:15,0:8:10.04:0,10,177	0/0:14,0:6:14.32:0,14,81	0/1:24,5:29:99:190,0,171	0/0:26,0:25:45.31:0,45,820	0/0:21,0:20:45.14:0,45,622	0/0:17,0:17:45.14:0,45,612	0/0:29,0:29:52.25:0,52,906	0/0:18,0:17:51.17:0,51,719	0/0:24,0:24:45.44:0,45,583	0/1:11,6:17:48.83:163,0,49	0/1:21,8:29:99:166,0,252	0/1:17,7:22:90.50:141,0,91	0/1:19,0:14:50.71:51,0,92	0/1:15,3:18:91.23:123,0,91	0/1:7,1:8:5.15:5,0,67	0/0:24,0:24:69.13:0,69,865	0/0:23,0:23:47.59:0,48,589	0/0:25,0:24:45.45:0,45,697	0/0:28,0:28:78.24:0,78,1024	0/0:22,0:21:60.16:0,60,937	0/0:30,0:26:54.11:0,54,904	0/0:11,0:9:22.62:0,23,358
chr10	21889301	.	A	ATC	6840.83	PASS	AB=0.683;AC=40;AF=0.714;AN=56;BaseQRankSum=-5.259;DP=479;FS=10.039;HRun=0;HaplotypeScore=113.9141;InbreedingCoeff=0.5602;MQ=83.22;MQ0=8;MQRankSum=-4.072;QD=20.67;ReadPosRankSum=-0.276;VQSLOD=4.8923;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:13,6:19:30.09:463,30,0	0/1:1,5:5:15.02:88,0,15	0/0:40,0:23:18.22:0,18,217	0/0:48,0:31:23.79:0,24,343	0/0:24,0:25:33.99:0,34,427	1/1:4,5:9:21.07:323,21,0	1/1:15,7:22:24.07:348,24,0	1/1:18,20:38:62.62:838,63,0	1/1:4,4:9:3.01:49,3,0	1/1:13,8:21:36.08:545,36,0	1/1:7,2:9:6.02:93,6,0	1/1:1,7:8:18.06:290,18,0	1/1:7,9:16:22.93:492,23,0	1/1:4,8:12:21.01:310,21,0	1/1:4,7:11:9.03:146,9,0	1/1:2,9:11:24.08:389,24,0	0/1:9,16:26:3.56:453,0,4	1/1:2,1:3:3.01:49,3,0	1/1:8,7:15:21.02:262,21,0	0/1:3,7:9:18.61:225,0,19	1/1:7,13:20:2:365,2,0	0/0:18,0:18:20.85:0,21,239	1/1:8,3:11:11.96:158,12,0	1/1:10,10:20:23.92:384,24,0	1/1:9,9:17:36.11:559,36,0	0/1:14,0:14:11.76:12,0,395	0/0:10,0:10:11.98:0,12,129	0/0:7,0:7:12.04:0,12,157
chr10	21889316	.	TCC	T	1616.09	PASS	AB=0.952;AC=16;AF=0.286;AN=56;BaseQRankSum=1.455;DP=474;FS=0.000;HRun=3;HaplotypeScore=127.2382;InbreedingCoeff=-0.0592;MQ=68.55;MQ0=11;MQRankSum=-1.837;QD=6.49;ReadPosRankSum=1.867;VQSLOD=0.2236;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:20,3:23:82.63:83,0,130	0/0:7,0:6:11.97:0,12,104	0/0:41,0:17:21.59:0,22,349	0/0:47,0:23:27.02:0,27,468	0/0:25,0:23:21.47:0,21,421	0/1:9,1:10:8.98:164,0,9	0/1:20,1:20:43.45:155,0,43	0/1:25,0:24:99:223,0,156	0/0:7,0:7:8.94:0,9,70	0/1:20,1:20:93.68:166,0,94	0/1:10,1:11:9.34:48,0,9	1/1:10,0:9:9.02:91,9,0	0/1:18,1:19:5.68:248,0,6	0/1:16,0:16:58.14:96,0,58	0/0:12,0:12:23.98:0,24,232	0/0:11,0:11:27.54:0,28,201	0/1:25,0:24:7.62:8,0,341	0/0:1,0:1:3:0,3,27	0/1:14,0:14:51.83:52,0,325	0/0:13,0:12:0.08:0,0,184	0/0:20,0:20:33.41:0,33,258	0/0:13,0:13:21.31:0,21,278	0/1:12,1:13:70.49:81,0,70	0/1:21,2:23:21.86:157,0,22	1/1:14,3:16:20.35:208,20,0	0/0:15,0:15:40.94:0,41,432	0/0:5,0:5:14.41:0,14,208	0/0:6,0:6:12.04:0,12,156
chr10	21889324	.	TC	T	2485.39	PASS	AB=0.983;AC=26;AF=0.464;AN=56;BaseQRankSum=7.400;DP=447;FS=0.000;HRun=8;HaplotypeScore=114.1042;InbreedingCoeff=0.7438;MQ=62.11;MQ0=12;MQRankSum=-3.727;QD=10.53;ReadPosRankSum=2.193;VQSLOD=2.2200;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,11:21:32.72:300,33,0	0/0:6,0:5:15.04:0,15,169	0/0:35,0:13:26.84:0,27,294	0/0:42,0:18:16.89:0,17,186	0/1:23,0:21:3.02:21,0,3	1/1:5,5:10:21.02:192,21,0	1/1:9,11:18:29.61:275,30,0	0/0:20,0:20:19.50:0,20,189	0/0:6,0:6:12.04:0,12,145	1/1:5,14:18:48.05:451,48,0	1/1:3,9:12:8.61:75,9,0	1/1:3,9:11:18:166,18,0	1/1:8,12:20:38.88:356,39,0	1/1:3,12:16:29.92:258,30,0	0/0:10,0:10:27.07:0,27,315	0/0:10,0:10:21.06:0,21,254	0/0:22,0:21:42.12:0,42,496	0/0:1,0:1:3.01:0,3,36	0/0:14,0:14:39.12:0,39,467	0/0:16,0:15:30.06:0,30,339	0/0:23,0:23:48.09:0,48,548	0/1:10,0:10:0.13:5,0,0	1/1:8,6:13:17.94:159,18,0	1/1:11,12:23:23.50:215,24,0	1/1:7,10:16:17.86:168,18,0	0/1:13,1:14:42.28:42,0,51	0/0:5,0:5:4.77:0,5,28	0/1:5,0:5:1.98:11,0,2
chr10	21889327	.	C	CT	673.26	PASS	AB=0.848;AC=12;AF=0.214;AN=56;BaseQRankSum=6.868;DP=446;FS=14.858;HRun=0;HaplotypeScore=117.1823;InbreedingCoeff=-0.0613;MQ=57.27;MQ0=13;MQRankSum=-7.550;QD=3.64;ReadPosRankSum=-1.721;VQSLOD=2.2601;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:15,7:22:4.34:4,0,105	0/0:6,0:5:15.05:0,15,208	0/0:33,0:12:29.87:0,30,347	0/0:40,0:15:23.06:0,23,303	0/0:23,0:21:23.11:0,23,190	1/1:7,3:10:6.72:111,7,0	0/1:17,4:19:24.24:112,0,24	0/0:18,0:18:4.80:0,5,222	0/0:9,0:9:18.04:0,18,218	0/1:15,3:17:71.50:106,0,71	0/1:10,2:12:10:10,0,14	0/1:11,2:11:15.85:77,0,16	0/1:15,4:19:32.37:114,0,32	0/1:15,2:17:37.21:124,0,37	0/0:10,0:10:27.08:0,27,361	0/0:10,0:10:29.76:0,30,342	0/0:23,0:22:44.25:0,44,591	0/0:1,0:1:3.01:0,3,42	0/0:15,0:15:40.02:0,40,545	0/0:17,0:16:31.32:0,31,387	0/0:21,0:21:51.07:0,51,649	0/0:11,0:11:12:0,12,86	0/1:8,5:12:27.77:41,0,28	0/1:19,3:22:5.29:89,0,5	0/1:17,0:16:33.04:33,0,56	0/0:14,0:14:33.98:0,34,349	0/0:5,0:5:14.93:0,15,129	0/0:5,0:5:8.89:0,9,65
chr10	21889334	.	C	CTGTGTGTGTGTG	916.06	PASS	AB=0.798;AC=8;AF=0.143;AN=56;BaseQRankSum=-1.038;DP=436;FS=6.666;HRun=0;HaplotypeScore=180.2325;InbreedingCoeff=0.6007;MQ=52.42;MQ0=11;MQRankSum=0.139;QD=16.36;ReadPosRankSum=-0.569;VQSLOD=2.0997;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:44.81:0,45,1252	0/0:5,0:5:12.04:0,12,392	0/0:29,0:11:29.38:0,29,630	0/0:37,0:12:21.12:0,21,752	0/1:21,0:20:1.83:96,0,2	0/0:12,0:12:24.08:0,24,705	0/0:21,0:18:42.14:0,42,1221	0/0:16,0:16:32.99:0,33,607	0/0:9,0:9:24.08:0,24,859	0/0:21,0:19:57.15:0,57,1434	0/0:12,0:12:11.95:0,12,297	0/0:14,0:12:20.86:0,21,491	0/0:20,0:20:45.14:0,45,1164	0/0:16,0:16:30.09:0,30,862	0/0:11,0:11:27.09:0,27,925	0/0:9,0:9:21.07:0,21,706	0/0:23,0:23:51.18:0,51,1700	0/0:1,0:1:3.01:0,3,97	0/0:16,0:15:42.14:0,42,1436	0/0:16,0:16:35.98:0,36,907	0/0:21,0:21:48.16:0,48,1570	1/1:11,0:11:5.56:53,6,0	0/0:14,0:13:21.07:0,21,586	0/0:20,0:20:20.13:0,20,612	0/0:14,0:14:24.08:0,24,585	0/1:7,8:15:69.76:690,0,70	1/1:1,1:2:5.85:192,6,0	1/1:5,0:5:4.57:15,5,0
chr10	21889338	.	CTG	C	2888.38	PASS	AB=0.988;AC=26;AF=0.481;AN=54;BaseQRankSum=5.267;DP=452;FS=10.276;HRun=0;HaplotypeScore=108.2900;InbreedingCoeff=0.7172;MQ=49.34;MQ0=9;MQRankSum=-3.841;QD=11.51;ReadPosRankSum=1.606;VQSLOD=2.8162;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:23,1:24:9.11:323,9,0	0/0:5,0:5:11.40:0,11,149	0/0:27,1:11:15.04:0,15,236	0/0:36,0:13:27.09:0,27,382	0/0:23,0:21:5.73:0,6,35	1/1:8,4:12:33:338,33,0	1/1:14,7:18:36.10:412,36,0	0/0:15,0:15:27.05:0,27,334	0/0:11,0:11:21.07:0,21,308	1/1:17,4:20:38.97:405,39,0	1/1:9,6:16:9.02:94,9,0	1/1:10,4:13:21.02:209,21,0	1/1:12,7:19:30.08:341,30,0	1/1:10,8:18:35.86:344,36,0	0/1:11,0:12:2.28:2,0,370	0/0:10,0:10:14.79:0,15,202	0/0:25,0:25:45.07:0,45,603	./.	0/0:16,0:15:24.08:0,24,370	0/1:14,0:14:12.14:12,0,244	0/0:21,0:21:42.07:0,42,548	0/1:11,0:11:0:0,0,0	1/1:11,2:13:18.05:205,18,0	1/1:14,7:21:21.04:230,21,0	1/1:5,8:13:15.04:168,15,0	0/1:19,1:19:4.36:4,0,197	0/0:5,0:5:5.99:0,6,50	0/0:5,0:5:2.98:0,3,21
chr10	21889703	.	T	TC	4288.06	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=13.908;DP=758;FS=0.396;HRun=2;HaplotypeScore=79.5419;InbreedingCoeff=0.9990;MQ=85.70;MQ0=0;MQRankSum=-1.645;QD=41.63;ReadPosRankSum=3.297;VQSLOD=4.7358;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,150,1917	0/0:11,0:11:33.09:0,33,414	0/0:25,0:25:66.17:0,66,813	0/0:23,0:23:56.30:0,56,711	1/1:0,19:19:48.16:718,48,0	0/0:28,0:28:81.25:0,81,1027	0/0:23,0:23:66.20:0,66,842	0/0:23,0:23:66.20:0,66,836	0/0:26,0:26:75.22:0,75,946	0/0:39,0:39:99:0,111,1427	0/0:21,0:21:60.14:0,60,745	0/0:37,0:37:99:0,111,1408	0/0:27,0:27:81.25:0,81,1038	0/0:33,0:33:93.27:0,93,1165	0/0:32,0:32:93.30:0,93,1207	0/0:36,0:36:99:0,108,1388	0/0:35,0:35:99:0,99,1270	0/0:24,0:24:69.16:0,69,861	0/0:20,0:20:51.17:0,51,662	0/0:24,0:24:72.07:0,72,882	0/0:44,0:44:99:0,132,1700	1/1:1,28:29:87.09:1243,87,0	0/0:20,0:20:54.08:0,54,648	0/0:34,0:34:99:0,102,1324	0/0:20,0:20:57.14:0,57,721	1/1:1,22:23:69.17:986,69,0	1/1:2,23:25:69.23:1027,69,0	1/1:0,7:7:21.07:314,21,0
chr10	21890892	.	G	GA	7857.44	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-14.470;DP=622;FS=0.315;HRun=8;HaplotypeScore=75.2336;InbreedingCoeff=0.9976;MQ=77.88;MQ0=0;MQRankSum=-1.693;QD=29.10;ReadPosRankSum=2.606;VQSLOD=4.8283;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,18:25:54.16:623,54,0	0/0:11,0:11:27:0,27,247	0/0:21,0:21:48.01:0,48,435	0/0:13,0:13:17.49:0,17,148	0/0:33,0:33:93.03:0,93,846	1/1:2,29:30:81.24:935,81,0	1/1:1,13:14:39.12:450,39,0	0/0:26,0:26:63.01:0,63,570	0/0:25,0:25:66.01:0,66,600	1/1:2,30:32:87.25:994,87,0	1/1:1,16:17:48.06:524,48,0	1/1:1,20:22:63.17:715,63,0	1/1:5,19:24:63.19:724,63,0	1/1:2,18:20:51.15:589,51,0	1/1:0,22:22:57.17:658,57,0	0/0:23,0:23:66.03:0,66,601	0/0:36,0:36:95.85:0,96,873	0/0:11,0:11:24.01:0,24,220	0/0:24,0:24:69.01:0,69,623	0/0:25,0:25:69.03:0,69,631	0/0:11,0:11:27.01:0,27,247	0/0:19,0:19:54.03:0,54,494	1/1:2,24:26:60.14:677,60,0	1/1:4,8:12:21.06:242,21,0	1/1:1,23:25:65.99:726,66,0	0/0:28,1:29:37.39:0,37,593	0/0:24,0:24:63.02:0,63,576	0/0:21,0:21:57.02:0,57,522
chr10	21891170	.	A	AG	8902.30	PASS	AB=1.000;AC=37;AF=0.661;AN=56;BaseQRankSum=-1.408;DP=538;FS=13.251;HRun=0;HaplotypeScore=145.1957;InbreedingCoeff=-0.0001;MQ=67.58;MQ0=0;MQRankSum=1.224;QD=18.59;ReadPosRankSum=-0.297;VQSLOD=5.3518;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,21:22:54.18:747,54,0	0/1:12,0:12:8.74:9,0,37	0/1:15,0:15:30.19:44,0,30	0/1:14,0:14:33.14:117,0,33	0/1:20,0:20:25.59:26,0,38	1/1:0,23:22:60.20:829,60,0	1/1:1,20:21:57.19:790,57,0	0/1:25,0:25:40.01:62,0,40	0/1:16,0:16:13.09:13,0,58	1/1:2,22:24:64.24:925,64,0	1/1:0,26:26:57.16:787,57,0	1/1:0,18:18:54.18:738,54,0	1/1:1,18:19:39.12:539,39,0	1/1:0,23:23:66.22:913,66,0	1/1:1,17:18:48.15:657,48,0	0/1:17,0:17:8.86:9,0,68	0/1:22,0:22:14.81:15,0,59	0/0:7,0:7:11.19:0,11,37	0/0:22,0:22:17.38:0,17,67	0/1:23,0:23:41.18:41,0,56	0/1:15,0:15:5.77:6,0,16	0/1:14,0:14:23.93:24,0,43	1/1:0,14:14:27.05:372,27,0	1/1:2,16:18:45.14:612,45,0	1/1:0,18:18:42.14:581,42,0	0/0:30,0:30:7.05:0,7,109	0/1:29,0:29:12.17:12,0,86	0/1:13,0:13:32.22:35,0,32
chr10	21891652	.	C	CA	1194.18	PASS	AB=0.500;AC=41;AF=0.976;AN=42;BaseQRankSum=1.087;DP=147;FS=0.000;HRun=2;HaplotypeScore=231.3679;InbreedingCoeff=0.1702;MQ=29.77;MQ0=0;MQRankSum=0.370;QD=8.18;ReadPosRankSum=0.681;VQSLOD=0.8604;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	1/1:1,4:5:10.98:48,11,0	./.	./.	1/1:4,8:12:20.27:74,20,0	1/1:3,3:6:2.71:12,3,0	./.	1/1:2,2:4:8.99:97,9,0	1/1:1,5:6:11.22:53,11,0	1/1:4,10:14:6.76:129,7,0	1/1:3,11:14:25.42:94,25,0	1/1:0,5:5:10.98:48,11,0	1/1:2,7:9:18.68:76,19,0	1/1:0,3:3:5.01:19,5,0	1/1:1,8:9:18.65:76,19,0	1/1:0,2:2:2.74:12,3,0	1/1:1,0:1:2.84:14,3,0	./.	1/1:1,1:2:2.99:23,3,0	1/1:0,14:14:37.97:163,38,0	./.	1/1:1,3:4:5.34:22,5,0	1/1:1,6:7:12.96:50,13,0	0/1:0,2:2:0:0,0,0	1/1:1,9:10:20.20:88,20,0	1/1:0,8:8:15.09:85,15,0	1/1:2,7:9:14.78:87,15,0	./.
chr10	21894373	.	T	TAC	217.59	PASS	AB=0.938;AC=10;AF=0.192;AN=52;BaseQRankSum=3.716;DP=593;FS=4.603;HRun=0;HaplotypeScore=124.3058;InbreedingCoeff=0.1868;MQ=30.65;MQ0=9;MQRankSum=-1.073;QD=1.18;ReadPosRankSum=0.174;VQSLOD=1.5123;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	1/1:6,0:6:1.55:4,2,0	0/0:14,0:5:11.99:0,12,145	0/0:21,0:3:8.94:0,9,86	0/0:33,5:39:3.01:0,3,43	0/0:14,0:14:8.42:0,8,82	0/0:7,0:5:2.99:0,3,24	0/0:21,0:19:54.82:0,55,597	0/1:12,0:11:0:0,0,0	0/1:23,5:26:49.95:227,0,50	0/0:26,8:32:2.81:0,3,44	1/1:29,3:32:0.26:1,0,0	0/0:31,2:33:3.91:0,4,26	0/1:28,1:29:0.11:0,0,0	0/0:24,0:24:2.78:0,3,9	0/1:24,0:24:0.07:0,0,2	0/0:9,0:9:2.99:0,3,24	0/0:7,0:7:8.24:0,8,78	0/0:9,0:9:15.04:0,15,280	0/0:22,1:23:5.99:0,6,49	0/0:27,0:26:26.98:0,27,317	./.	0/1:17,4:20:0.13:0,0,0	0/0:13,1:14:2.91:0,3,25	0/0:30,8:38:7.36:0,7,72	0/1:32,1:31:73.48:73,0,340	0/0:33,3:35:14.96:0,15,124	0/0:11,3:14:7.40:0,7,37
chr10	21894375	.	T	TAC	71.88	PASS	AB=0.928;AC=8;AF=0.154;AN=52;BaseQRankSum=5.225;DP=626;FS=6.730;HRun=0;HaplotypeScore=130.5487;InbreedingCoeff=-0.0297;MQ=30.88;MQ0=10;MQRankSum=-1.578;QD=0.44;ReadPosRankSum=0.447;VQSLOD=2.1902;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	1/1:6,1:7:1.55:4,2,0	0/0:14,0:5:5.20:0,5,107	0/0:23,0:3:8.94:0,9,82	0/0:42,0:42:3.01:0,3,39	0/0:12,2:14:14.55:0,15,122	0/0:6,1:5:5.99:0,6,48	0/0:23,0:21:54.85:0,55,578	0/1:12,1:12:0:0,0,0	0/1:30,2:29:66.15:66,0,231	0/0:36,1:35:5.81:0,6,64	0/0:28,4:32:2.24:0,2,24	0/0:29,5:34:1.94:0,2,23	0/1:26,4:30:0.11:0,0,0	0/0:22,3:25:3.36:0,3,20	0/0:19,6:25:2.55:0,3,26	0/0:10,0:10:2.99:0,3,24	0/0:7,0:7:5.55:0,6,47	0/1:10,1:11:24.91:25,0,197	0/0:23,0:23:5.99:0,6,49	0/0:29,0:28:35.83:0,36,353	./.	0/0:22,0:21:2.48:0,2,24	0/0:12,2:14:2.91:0,3,24	0/0:38,2:39:6.44:0,6,66	0/1:32,1:32:66.51:67,0,353	0/1:32,3:36:12.88:13,0,149	0/0:14,0:14:12.35:0,12,57
chr10	21894395	.	CGT	C	1701.04	PASS	AB=0.816;AC=12;AF=0.231;AN=52;BaseQRankSum=11.767;DP=758;FS=82.905;HRun=0;HaplotypeScore=153.2323;InbreedingCoeff=-0.3327;MQ=32.50;MQ0=15;MQRankSum=-7.967;QD=4.62;ReadPosRankSum=4.699;VQSLOD=-0.3108;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	0/0:11,2:12:4.73:0,5,153	0/0:26,0:9:26.83:0,27,427	0/0:38,0:9:26.07:0,26,386	0/0:37,9:46:5.99:0,6,51	0/0:15,4:19:17.71:0,18,341	0/0:5,3:6:9.03:0,9,183	0/1:44,0:40:72.12:72,0,1250	0/0:15,0:14:10.46:0,10,201	0/1:23,14:32:99:589,0,250	0/0:30,11:38:6.02:0,6,99	0/1:21,13:34:9.73:54,0,10	0/1:24,10:34:39.46:91,0,39	0/0:16,14:31:2.63:0,3,62	0/1:25,5:30:18.40:18,0,113	0/1:15,13:28:67.24:67,0,106	0/0:18,0:18:18.04:0,18,546	0/1:13,0:13:18.49:18,0,426	0/1:10,2:12:30.27:30,0,462	0/0:25,4:29:21.07:0,21,425	0/0:38,0:35:63.19:0,63,1240	./.	0/0:24,1:23:5.94:0,6,80	0/0:13,2:15:2.92:0,3,17	0/1:32,10:41:4.51:5,0,64	0/1:25,10:34:99:538,0,101	0/1:23,17:40:40.44:318,0,40	0/1:16,2:18:38.27:38,0,111
chr10	21894403	.	CAT	C	1302.93	PASS	AB=0.918;AC=12;AF=0.231;AN=52;BaseQRankSum=4.561;DP=793;FS=12.779;HRun=0;HaplotypeScore=169.8884;InbreedingCoeff=-0.1674;MQ=32.79;MQ0=30;MQRankSum=-5.711;QD=3.48;ReadPosRankSum=0.549;VQSLOD=2.2576;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:12,0:11:4.73:0,5,165	0/0:25,0:9:3.03:0,3,249	0/1:37,0:9:1.90:2,0,284	1/1:36,8:44:8.55:115,9,0	0/0:21,0:21:16.72:0,17,294	0/0:8,0:6:9.03:0,9,173	0/1:38,3:35:99:224,0,1057	0/0:17,0:16:17.66:0,18,263	0/1:39,0:31:40.34:40,0,480	0/0:42,0:39:5.84:0,6,113	0/0:35,0:35:6.36:0,6,58	0/1:34,1:35:1.86:2,0,73	0/0:31,0:31:2.57:0,3,57	0/1:31,0:31:34.23:34,0,107	0/1:29,0:29:3.60:4,0,127	0/0:23,0:22:40.90:0,41,699	0/0:15,0:15:13.39:0,13,521	0/1:17,0:15:21.64:22,0,388	0/0:30,0:30:24.08:0,24,451	0/0:46,0:40:78.13:0,78,1345	./.	0/0:23,0:21:6:0,6,100	0/0:16,0:16:2.80:0,3,41	0/0:44,0:43:0.54:0,1,90	0/1:34,8:36:99:438,0,190	0/1:29,11:37:51.43:285,0,51	0/1:9,10:19:71.12:270,0,71
chr10	21894405	.	TAC	T	684.70	PASS	AB=0.964;AC=12;AF=0.231;AN=52;BaseQRankSum=5.969;DP=798;FS=17.448;HRun=0;HaplotypeScore=177.6563;InbreedingCoeff=-0.1711;MQ=32.99;MQ0=32;MQRankSum=-5.276;QD=1.79;ReadPosRankSum=1.815;VQSLOD=1.8211;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:12,0:11:4.73:0,5,146	0/0:24,0:8:18.83:0,19,244	0/0:36,0:9:15.05:0,15,247	1/1:38,5:44:5.48:44,5,0	0/0:21,0:21:18.05:0,18,279	0/0:8,0:6:9.03:0,9,153	0/1:42,0:35:53.99:54,0,933	0/0:17,0:16:15:0,15,241	0/1:37,1:31:76.42:76,0,440	0/0:40,3:40:5.84:0,6,89	0/0:35,0:35:6.29:0,6,36	0/1:35,0:35:9.77:10,0,43	0/0:31,0:32:2.86:0,3,51	0/1:31,0:31:17.43:17,0,93	0/1:29,0:29:48.50:48,0,131	0/0:23,0:22:44.24:0,44,714	0/1:15,2:17:6.60:7,0,549	0/0:17,0:15:19.98:0,20,390	0/0:32,0:31:30.06:0,30,474	0/0:45,0:39:81.26:0,81,1317	./.	0/0:20,4:21:5.96:0,6,72	0/0:16,0:16:2.76:0,3,20	0/1:37,5:43:4.28:4,0,59	0/1:40,2:37:99:298,0,243	0/1:39,0:37:76.52:163,0,77	0/1:19,0:19:99:102,0,103
chr10	21894417	.	TACACACACATAC	T	1806.99	PASS	AB=1.000;AC=18;AF=0.375;AN=48;BaseQRankSum=-2.746;DP=807;FS=2.299;HRun=0;HaplotypeScore=264.2150;InbreedingCoeff=0.6391;MQ=34.39;MQ0=30;MQRankSum=0.038;QD=5.85;ReadPosRankSum=-1.005;VQSLOD=2.3000;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/0:13,0:12:15.05:0,15,548	./.	./.	0/0:41,0:43:12.04:0,12,368	1/1:18,3:21:14.70:299,15,0	1/1:9,0:7:3.01:51,3,0	0/0:44,0:37:6.02:0,6,74	0/0:18,0:17:20.48:0,20,632	0/1:38,0:31:99:154,0,170	1/1:42,1:40:5.78:122,6,0	1/1:36,1:37:17.91:367,18,0	0/1:40,0:40:30.20:387,0,30	1/1:34,0:34:2.58:33,3,0	0/0:31,0:31:8.87:0,9,397	0/0:29,0:29:11.88:0,12,345	0/0:24,0:23:49.88:0,50,1599	0/0:19,0:20:44.14:0,44,1283	0/0:19,0:17:14.79:0,15,480	0/0:32,0:31:33.11:0,33,1292	0/0:51,0:44:75.15:0,75,2633	./.	1/1:25,0:22:8.71:175,9,0	1/1:15,0:15:3.48:104,3,0	1/1:43,2:46:11.10:285,11,0	0/0:42,0:37:18.02:0,18,768	0/0:41,0:38:44.83:0,45,950	0/0:19,0:19:27.26:0,27,971
chr10	21894427	.	TAC	T	478.71	PASS	AB=0.961;AC=16;AF=0.286;AN=56;BaseQRankSum=7.322;DP=816;FS=11.831;HRun=0;HaplotypeScore=217.4942;InbreedingCoeff=-0.0183;MQ=35.24;MQ0=38;MQRankSum=-4.231;QD=1.16;ReadPosRankSum=-1.428;VQSLOD=1.4727;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:2.99:0,3,23	0/0:12,1:12:10.76:0,11,248	0/0:12,0:5:4.72:0,5,22	0/0:17,0:5:5.92:0,6,39	0/0:40,1:42:15.05:0,15,250	0/0:21,0:21:17.26:0,17,220	0/1:10,0:8:28.70:29,0,135	0/0:46,1:36:62.86:0,63,847	0/0:19,1:19:30.05:0,30,469	0/1:35,2:29:78.09:78,0,302	0/1:41,5:43:16.61:17,0,50	1/1:36,2:38:2.68:53,3,0	1/1:36,4:40:7.24:208,7,0	0/1:34,0:34:42.43:44,0,42	0/1:31,1:32:3.83:4,0,162	0/1:29,1:30:43.94:44,0,195	0/0:26,0:25:54.42:0,54,854	0/0:19,1:20:18.36:0,18,754	0/1:17,0:15:5.67:6,0,250	0/0:30,2:31:45.11:0,45,725	0/0:52,0:43:87.30:0,87,1466	0/0:18,1:19:3.01:0,3,47	0/1:23,2:22:40.81:41,0,42	1/1:15,0:15:2.33:10,2,0	0/1:43,4:46:14.50:18,0,14	0/1:42,0:37:80.22:80,0,721	0/0:45,1:44:30.45:0,30,820	0/0:19,1:20:19.22:0,19,439
chr10	21895107	.	A	AGAGG	3456.02	PASS	AB=0.722;AC=29;AF=0.518;AN=56;BaseQRankSum=-5.840;DP=401;FS=20.166;HRun=0;HaplotypeScore=62.2619;InbreedingCoeff=0.6699;MQ=60.79;MQ0=9;MQRankSum=1.657;QD=18.38;ReadPosRankSum=0.265;VQSLOD=1.2886;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:68.79:0,69,1038	1/1:3,0:3:3.01:72,3,0	0/1:32,0:14:12:12,0,321	0/0:23,0:17:29.96:0,30,354	1/1:9,4:13:11.97:228,12,0	0/0:17,0:17:45.15:0,45,730	0/0:20,0:20:45.12:0,45,707	1/1:16,0:14:6.60:61,7,0	1/1:12,0:12:27.02:466,27,0	0/0:16,0:16:39.07:0,39,623	0/0:10,0:10:24.05:0,24,327	0/0:22,0:22:44.43:0,44,610	0/0:17,0:17:36.10:0,36,557	0/0:17,0:17:33.06:0,33,450	1/1:2,3:6:6.02:149,6,0	1/1:2,6:7:6.02:149,6,0	0/1:5,8:15:13.96:14,0,18	1/1:4,5:9:6.02:149,6,0	1/1:8,0:7:11.96:238,12,0	1/1:2,6:9:14.98:260,15,0	1/1:4,19:23:15.05:372,15,0	1/1:2,2:4:6.02:149,6,0	0/0:8,0:8:14.93:0,15,192	0/0:22,0:22:48.09:0,48,725	0/0:11,0:11:20.99:0,21,321	0/1:4,13:17:8.58:820,0,9	1/1:3,6:9:9.03:218,9,0	1/1:4,0:4:6:98,6,0
chr10	21897942	.	TA	T	10170.46	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=15.333;DP=657;FS=0.933;HRun=2;HaplotypeScore=60.3237;InbreedingCoeff=0.9995;MQ=81.92;MQ0=0;MQRankSum=-2.601;QD=34.24;ReadPosRankSum=4.473;VQSLOD=4.9753;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,20:21:54.11:680,54,0	0/0:9,0:9:27.09:0,27,405	0/0:21,0:21:63.21:0,63,922	0/0:13,0:13:39.13:0,39,569	0/0:40,0:40:99:0,117,1750	1/1:1,22:23:63.20:818,63,0	1/1:1,31:32:78.25:1013,78,0	0/0:36,0:36:99:0,102,1528	0/0:18,0:18:54.17:0,54,790	1/1:0,24:24:72.22:922,72,0	1/1:1,21:22:60.19:779,60,0	1/1:0,33:33:75.24:974,75,0	1/1:0,30:30:75.24:974,75,0	1/1:1,23:24:69.22:896,69,0	1/1:0,28:28:75.24:974,75,0	0/0:24,0:24:69.23:0,69,1015	0/0:37,0:37:99:0,111,1614	0/0:17,0:17:48.16:0,48,704	0/0:18,0:18:54.17:0,54,788	0/0:17,0:17:51.16:0,51,745	0/0:21,0:21:63.20:0,63,920	0/0:24,0:24:69.23:0,69,1016	1/1:0,20:20:60.20:779,60,0	1/1:0,13:13:33.11:428,33,0	1/1:0,27:27:72.23:935,72,0	0/0:33,1:34:60.36:0,60,1373	0/0:23,0:23:66.20:0,66,949	0/0:8,0:8:24.02:0,24,294
chr10	21898929	.	T	TG	933.99	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=7.994;DP=469;FS=3.207;HRun=0;HaplotypeScore=52.5900;InbreedingCoeff=0.9207;MQ=66.84;MQ0=0;MQRankSum=-0.207;QD=19.06;ReadPosRankSum=2.050;VQSLOD=5.7184;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:75.23:0,75,1014	0/0:11,0:11:30.08:0,30,387	0/0:17,0:11:2.39:0,2,167	0/0:15,0:13:12.09:0,12,165	0/0:15,0:15:37.24:0,37,213	0/0:31,0:31:87.21:0,87,1112	0/0:15,0:15:45.14:0,45,610	0/0:26,0:26:72.21:0,72,945	0/0:13,0:13:36.08:0,36,467	0/0:21,0:21:63.16:0,63,801	0/0:15,0:15:45.12:0,45,587	0/0:18,0:18:54.15:0,54,718	0/0:18,0:18:54.17:0,54,737	0/0:17,0:17:51.15:0,51,679	0/0:18,0:18:54.15:0,54,706	0/0:13,0:13:36.12:0,36,502	0/0:10,0:10:30.09:0,30,402	0/0:11,0:11:29.85:0,30,347	0/0:16,0:16:48.15:0,48,635	0/0:11,0:11:30.07:0,30,358	0/0:9,0:9:27.09:0,27,377	0/0:15,0:15:38.28:0,38,197	0/0:23,0:23:69.22:0,69,948	0/0:21,0:21:63.18:0,63,828	0/0:16,0:16:48.13:0,48,635	1/1:3,19:22:34.81:469,35,0	1/1:1,18:18:37.58:398,38,0	1/1:1,7:8:17.15:207,17,0
chr10	21899197	.	CAT	C	384.55	PASS	AC=6;AF=0.120;AN=50;BaseQRankSum=4.109;DP=243;FS=19.007;HRun=0;HaplotypeScore=61.7780;InbreedingCoeff=0.6052;MQ=80.99;MQ0=7;MQRankSum=-3.205;QD=19.23;ReadPosRankSum=0.839;VQSLOD=1.6444;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:7:3.01:0,3,58	0/0:3,0:3:9.03:0,9,172	0/0:33,0:14:29.69:0,30,498	0/0:34,0:26:38.69:0,39,554	./.	0/0:10,0:10:9.03:0,9,164	0/0:1,0:1:3.01:0,3,58	0/0:37,0:37:99:0,108,1872	0/0:5,0:5:3.01:0,3,58	0/0:9,0:9:23.20:0,23,391	0/0:5,0:5:9.03:0,9,173	0/0:5,0:5:3.01:0,3,58	./.	0/0:5,0:5:12.04:0,12,230	0/0:4,0:4:6.02:0,6,90	0/0:4,0:4:12.04:0,12,229	0/0:15,0:15:9.03:0,9,139	0/0:10,0:10:8.98:0,9,118	0/0:6,0:6:16.61:0,17,271	0/0:8,0:8:24.08:0,24,451	0/0:5,0:5:12.04:0,12,229	./.	0/0:6,0:6:18.06:0,18,345	0/0:1,0:1:2.99:0,3,23	0/0:5,0:5:14.77:0,15,209	1/1:2,3:5:14.63:141,15,0	1/1:0,9:9:12.04:180,12,0	1/1:0,6:6:15.03:191,15,0
chr10	21899206	.	TATATATAC	T	2794.17	PASS	AB=1.000;AC=29;AF=0.763;AN=38;BaseQRankSum=-4.883;DP=218;FS=10.908;HRun=0;HaplotypeScore=70.4780;InbreedingCoeff=0.2522;MQ=79.22;MQ0=6;MQRankSum=1.187;QD=19.01;ReadPosRankSum=-0.352;VQSLOD=1.3413;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	1/1:2,0:2:3.01:47,3,0	0/0:25,0:11:5.64:0,6,94	0/1:31,0:21:51.15:51,0,124	./.	./.	1/1:1,0:1:3:25,3,0	1/1:10,28:38:81.14:1373,81,0	./.	1/1:3,4:7:12.46:191,12,0	./.	./.	./.	1/1:3,0:3:6.02:92,6,0	1/1:0,3:3:3.01:82,3,0	1/1:4,0:4:9.03:142,9,0	1/1:4,12:16:3.01:81,3,0	1/1:1,9:10:6.02:163,6,0	1/1:2,5:7:15.02:310,15,0	1/1:5,0:5:9.03:131,9,0	1/1:3,0:3:6.02:89,6,0	./.	1/1:4,0:4:6.01:72,6,0	./.	0/1:4,0:4:20.79:63,0,21	0/0:5,0:5:4.90:0,5,127	0/0:10,0:9:5.88:0,6,78	0/1:9,0:9:4.87:5,0,156
chr10	21899234	.	T	TACACAC	365.06	PASS	AB=0.900;AC=7;AF=0.250;AN=28;BaseQRankSum=4.271;DP=128;FS=1.357;HRun=0;HaplotypeScore=59.1533;InbreedingCoeff=0.5451;MQ=64.08;MQ0=2;MQRankSum=-3.407;QD=11.41;ReadPosRankSum=1.451;VQSLOD=2.0315;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:2,0:2:0:0,0,0	0/0:1,0:1:3.01:0,3,71	0/1:8,0:2:0:0,0,0	0/0:11,0:5:2.78:0,3,13	./.	./.	./.	0/0:36,0:36:87.18:0,87,1874	./.	0/0:2,0:2:3.01:0,3,33	./.	./.	./.	./.	0/0:2,0:2:3.01:0,3,71	0/0:2,0:2:6.02:0,6,140	0/0:10,0:10:5.75:0,6,125	0/0:9,0:9:12.01:0,12,192	0/0:7,0:7:20.61:0,21,233	./.	./.	./.	./.	./.	./.	1/1:1,5:6:8.83:193,9,0	1/1:5,0:4:6.02:114,6,0	1/1:12,0:11:13.44:162,13,0
chr10	21899441	.	GAA	G	1348.61	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=7.030;DP=436;FS=5.173;HRun=10;HaplotypeScore=56.8954;InbreedingCoeff=0.8918;MQ=78.46;MQ0=0;MQRankSum=-3.291;QD=23.25;ReadPosRankSum=3.079;VQSLOD=3.0204;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:69.22:0,69,1066	0/0:3,0:3:9.01:0,9,100	0/0:21,0:16:36.56:0,37,453	0/0:19,0:15:17.90:0,18,196	0/0:0,0:17:40.12:0,40,146	0/0:15,0:15:45.14:0,45,693	0/0:10,0:10:27.08:0,27,401	0/0:28,0:28:66.22:0,66,1010	0/0:10,0:10:30.09:0,30,455	0/0:17,0:17:45.15:0,45,708	0/0:14,0:14:42.13:0,42,645	0/0:16,0:16:45.14:0,45,669	0/0:16,0:16:48.15:0,48,734	0/0:12,0:12:33.10:0,33,499	0/0:23,0:23:60.20:0,60,925	0/0:17,0:17:51.15:0,51,764	0/0:31,0:31:86.78:0,87,1320	0/0:16,0:16:42.14:0,42,653	0/0:18,0:18:51.17:0,51,790	0/0:17,0:17:48.11:0,48,708	0/0:2,0:2:3.01:0,3,48	0/0:1,0:5:9.98:0,10,34	0/0:7,0:8:23.57:0,24,342	0/0:4,0:4:12.04:0,12,190	0/0:13,0:13:33.11:0,33,516	1/1:1,22:23:21.57:688,22,0	1/1:0,22:22:48.13:535,48,0	1/1:0,13:13:24.06:267,24,0
chr10	21900391	.	TACACACACACACACACACACAC	T	8747.79	PASS	AB=0.778;AC=26;AF=0.464;AN=56;BaseQRankSum=8.487;DP=559;FS=38.536;HRun=0;HaplotypeScore=289.6796;InbreedingCoeff=0.7054;MQ=68.63;MQ0=10;MQRankSum=-8.852;QD=28.59;ReadPosRankSum=2.992;VQSLOD=2.6532;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:16,10:26:3.01:174,3,0	0/0:12,0:12:15.05:0,15,1302	0/0:34,0:25:9.02:0,9,237	0/0:28,0:23:21.07:0,21,749	0/1:12,0:17:79.16:79,0,168	1/1:16,6:22:15.05:871,15,0	1/1:19,4:23:3.01:175,3,0	0/0:32,0:30:48.16:0,48,2392	0/0:13,0:13:15.01:0,15,547	1/1:15,1:16:12.03:413,12,0	1/1:11,6:18:6.02:349,6,0	1/1:13,16:29:38.13:2264,38,0	1/1:14,3:18:9.03:502,9,0	1/1:16,11:28:18.06:1025,18,0	1/1:21,6:29:24.08:1261,24,0	0/0:12,0:12:18.06:0,18,1516	0/0:16,0:19:36.12:0,36,2454	0/0:13,0:13:30.10:0,30,2616	0/0:15,0:15:30.10:0,30,1614	0/0:8,0:8:3.01:0,3,248	0/0:23,0:22:27.09:0,27,1882	0/1:13,0:18:84.61:85,0,130	1/1:10,6:17:12.04:676,12,0	1/1:21,9:30:12.93:699,13,0	1/1:9,5:14:3.01:174,3,0	0/0:19,0:20:32.31:0,32,990	0/0:8,0:14:30.10:0,30,834	0/0:6,0:9:18.03:0,18,435
chr10	21902597	.	CT	C	268.81	PASS	AB=0.895;AC=6;AF=0.107;AN=56;BaseQRankSum=1.562;DP=529;FS=0.706;HRun=12;HaplotypeScore=66.5604;InbreedingCoeff=0.3113;MQ=75.64;MQ0=1;MQRankSum=1.914;QD=2.99;ReadPosRankSum=2.195;VQSLOD=-0.7224;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:4,1:23:5.34:0,5,105	0/1:9,1:10:2.20:2,0,162	0/0:14,0:12:8.97:0,9,80	0/0:15,0:16:1.23:0,1,4	0/0:24,0:24:51.07:0,51,501	0/0:7,0:30:45.74:0,46,251	0/0:3,0:8:17.20:0,17,96	0/1:25,4:29:40.98:41,0,346	0/1:17,2:19:1.68:2,0,291	0/0:3,0:15:37.74:0,38,225	0/0:4,0:20:48.96:0,49,271	0/0:6,0:15:30.70:0,31,163	0/0:10,0:22:20.61:0,21,131	0/0:4,0:18:17.27:0,17,94	1/1:7,16:24:43.84:331,44,0	0/0:26,0:26:60.05:0,60,570	0/0:16,0:16:39.04:0,39,378	0/1:7,1:8:2.25:2,0,141	0/0:21,0:22:48.82:0,49,473	0/0:25,2:28:16.45:0,16,491	0/0:10,0:11:17.12:0,17,188	0/0:16,2:18:15.82:0,16,326	0/0:10,0:22:40.29:0,40,229	0/0:1,0:11:11.36:0,11,58	0/0:7,0:27:22.76:0,23,116	0/0:10,0:10:18.02:0,18,169	0/0:33,1:34:54.78:0,55,683	0/0:7,0:8:17.86:0,18,160
chr10	21903752	.	CT	C	22891.83	PASS	AB=0.797;AC=54;AF=0.964;AN=56;BaseQRankSum=-4.547;DP=686;FS=5.060;HRun=1;HaplotypeScore=135.6805;InbreedingCoeff=-0.0435;MQ=78.38;MQ0=0;MQRankSum=-5.565;QD=33.37;ReadPosRankSum=3.998;VQSLOD=4.4379;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:17:42.13:521,42,0	1/1:0,12:12:2.93:42,3,0	0/1:6,7:13:96.14:115,0,96	0/1:16,1:17:99:186,0,101	1/1:36,0:36:99:1226,99,0	1/1:27,0:27:69.22:855,69,0	1/1:20,0:20:57.18:707,57,0	1/1:33,0:33:96.30:1189,96,0	1/1:24,0:24:69.22:855,69,0	1/1:32,0:32:96.29:1178,96,0	1/1:21,0:21:60.19:742,60,0	1/1:27,0:27:78.25:966,78,0	1/1:27,0:27:78.24:965,78,0	1/1:34,0:34:99:1249,102,0	1/1:35,0:35:93.29:1153,93,0	1/1:31,0:31:90.28:1116,90,0	1/1:21,0:21:60.19:742,60,0	1/1:12,0:12:36.11:446,36,0	1/1:21,0:21:54.16:657,54,0	1/1:36,0:37:99:1289,105,0	1/1:29,0:29:75.24:929,75,0	1/1:12,0:12:36.11:446,36,0	1/1:30,0:29:87.27:1078,87,0	1/1:21,0:21:63.20:781,63,0	1/1:18,0:18:48.15:594,48,0	1/1:33,0:33:99:1226,99,0	1/1:31,0:31:87.27:1079,87,0	1/1:15,0:15:45.14:558,45,0
chr10	21903973	.	G	GAA	2465.45	PASS	AB=0.532;AC=9;AF=0.161;AN=56;BaseQRankSum=-0.510;DP=553;FS=5.269;HRun=8;HaplotypeScore=76.6176;InbreedingCoeff=0.8630;MQ=82.19;MQ0=0;MQRankSum=-0.865;QD=23.48;ReadPosRankSum=0.999;VQSLOD=2.9047;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:36.10:0,36,401	0/0:8,0:8:24.06:0,24,267	0/0:27,0:26:26.65:0,27,421	0/0:19,0:18:16.20:0,16,203	1/1:3,0:24:52.40:180,52,0	0/0:23,0:23:66.18:0,66,736	0/0:16,0:16:48.13:0,48,535	0/0:18,0:18:51.14:0,51,569	0/0:20,0:20:51.10:0,51,559	0/0:21,0:21:51.12:0,51,557	0/0:19,0:19:51.13:0,51,569	0/0:19,0:19:54.10:0,54,583	0/0:20,0:20:51.13:0,51,569	0/0:24,0:24:57.13:0,57,635	0/0:30,0:30:81.17:0,81,875	0/0:24,0:24:69.18:0,69,769	0/0:24,0:24:72.14:0,72,773	0/0:10,0:10:30.06:0,30,323	0/0:16,0:17:33.01:0,33,418	0/0:31,0:31:78.17:0,78,858	0/0:14,0:14:30.08:0,30,334	1/1:1,1:19:42.94:185,43,0	0/0:21,0:21:60.16:0,60,669	0/0:14,0:14:36.09:0,36,401	0/0:17,0:17:48.13:0,48,535	0/1:3,22:25:25.14:923,0,25	1/1:4,23:28:66:1009,66,0	1/1:1,7:8:21.07:333,21,0
chr10	21904090	.	AG	A	8504.82	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=11.252;DP=579;FS=0.318;HRun=1;HaplotypeScore=60.2688;InbreedingCoeff=0.9997;MQ=92.67;MQ0=0;MQRankSum=-2.878;QD=37.14;ReadPosRankSum=1.954;VQSLOD=5.2098;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,16:16:45.15:629,45,0	0/0:12,0:12:36.12:0,36,575	0/0:31,0:31:93.30:0,93,1400	0/0:17,0:17:51.17:0,51,772	0/0:30,0:30:90.28:0,90,1383	1/1:0,19:19:45.15:629,45,0	1/1:0,11:11:30.10:420,30,0	0/0:22,0:22:66.20:0,66,990	0/0:25,0:25:75.26:0,75,1194	1/1:0,29:29:87.29:1214,87,0	1/1:0,25:25:69.14:921,69,0	1/1:0,18:18:51.17:713,51,0	1/1:0,28:28:72.24:1001,72,0	1/1:0,19:19:51.17:713,51,0	0/0:24,0:24:72.22:0,72,1104	0/0:21,0:21:63.21:0,63,1007	0/0:17,0:17:51.12:0,51,762	0/0:12,0:12:30.10:0,30,465	0/0:19,0:19:57.19:0,57,893	0/0:31,0:31:93.25:0,93,1442	0/0:15,0:15:45.13:0,45,690	0/0:20,0:20:60.20:0,60,959	1/1:0,28:27:72.24:1006,72,0	1/1:0,19:19:57.19:797,57,0	1/1:0,17:17:33.10:462,33,0	0/0:15,0:15:45.14:0,45,699	0/0:29,0:29:87.30:0,87,1390	0/0:10,0:10:30.06:0,30,429
chr10	21905356	.	TAC	T	888.31	PASS	AB=1.000;AC=19;AF=0.365;AN=52;BaseQRankSum=-5.002;DP=381;FS=19.007;HRun=0;HaplotypeScore=84.4839;InbreedingCoeff=0.6185;MQ=56.58;MQ0=12;MQRankSum=3.241;QD=7.72;ReadPosRankSum=4.753;VQSLOD=1.8223;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:14:1.23:0,1,3	1/1:0,4:6:11.70:94,12,0	./.	./.	0/0:7,0:7:5.76:0,6,56	0/0:20,0:19:7.55:0,8,58	0/0:14,0:14:7.85:0,8,55	0/1:21,0:19:27.18:27,0,39	1/1:3,7:10:17.79:199,18,0	0/0:12,0:12:21.41:0,21,235	0/0:10,0:12:14.81:0,15,132	0/0:12,0:12:14.98:0,15,126	0/0:9,0:10:8.91:0,9,64	0/0:2,0:7:3:0,3,26	0/0:19,0:18:6:0,6,64	1/1:3,6:10:17.64:180,18,0	1/1:6,3:9:8.48:97,8,0	1/1:13,3:15:10.28:130,10,0	1/1:6,2:7:2.97:33,3,0	1/1:2,2:4:9.02:100,9,0	1/1:9,12:20:18.05:200,18,0	0/0:11,0:11:2.54:0,3,43	1/1:10,0:10:0.47:1,0,0	0/0:8,0:15:3:0,3,26	0/0:18,0:19:17.61:0,18,174	0/0:8,0:7:8.17:0,8,139	0/0:8,0:8:17.86:0,18,156	0/0:4,0:4:5.34:0,5,28
chr10	21905438	.	TAATAAATA	T	2564.75	PASS	AC=18;AF=0.409;AN=44;BaseQRankSum=-1.989;DP=296;FS=7.743;HRun=0;HaplotypeScore=92.6107;InbreedingCoeff=0.7862;MQ=64.21;MQ0=0;MQRankSum=-3.138;QD=26.17;ReadPosRankSum=4.001;VQSLOD=2.2090;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,7:10:9.03:231,9,0	0/0:6,0:7:6.02:0,6,210	0/0:14,0:12:6.02:0,6,202	./.	0/0:7,0:7:12.04:0,12,500	1/1:6,11:17:27.09:692,27,0	./.	0/0:40,0:38:78.26:0,78,2180	0/0:5,0:6:6.02:0,6,198	1/1:10,9:19:27.05:549,27,0	1/1:8,5:13:11.96:247,12,0	1/1:7,4:11:6.02:154,6,0	1/1:1,3:4:6.02:154,6,0	1/1:7,1:8:6:101,6,0	1/1:3,3:6:6.02:148,6,0	0/0:4,0:5:3.01:0,3,105	0/0:9,0:16:18.04:0,18,408	0/0:2,0:12:30.10:0,30,1051	0/0:12,0:18:30.10:0,30,933	0/0:6,0:9:9.03:0,9,251	./.	./.	./.	./.	1/1:3,6:9:18.06:461,18,0	0/0:3,0:7:12.04:0,12,410	0/0:7,0:8:9.03:0,9,220	0/0:4,0:15:24.08:0,24,841
chr10	21906373	.	GGC	G	3059.58	PASS	AC=22;AF=0.423;AN=52;BaseQRankSum=7.172;DP=384;FS=6.553;HRun=0;HaplotypeScore=47.8528;InbreedingCoeff=0.8351;MQ=26.79;MQ0=122;MQRankSum=-3.362;QD=20.26;ReadPosRankSum=1.785;VQSLOD=3.0906;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,11:5:9.03:146,9,0	0/0:3,0:3:9.03:0,9,171	./.	./.	0/0:6,0:5:6.02:0,6,121	1/1:0,14:10:27.09:440,27,0	1/1:1,11:6:18.06:293,18,0	0/0:27,0:21:63.17:0,63,1237	0/0:14,0:10:18.06:0,18,364	1/1:0,13:10:24.08:390,24,0	1/1:0,6:6:9.03:146,9,0	1/1:0,21:16:18.06:293,18,0	1/1:0,23:21:48.16:781,48,0	1/1:0,26:21:33.11:537,33,0	0/0:25,0:17:24.08:0,24,486	0/0:18,0:15:35.73:0,36,728	0/0:9,0:4:9.03:0,9,182	0/0:5,0:4:6.02:0,6,122	0/0:12,0:10:30.09:0,30,573	0/0:7,0:7:15.01:0,15,263	0/0:20,0:6:6.02:0,6,122	0/0:14,0:14:15.52:0,16,294	1/1:0,2:2:3.01:49,3,0	1/1:0,20:10:6.02:98,6,0	1/1:0,2:2:6.02:85,6,0	0/0:13,0:10:27.09:0,27,548	0/0:26,0:22:32.79:0,33,666	0/0:10,0:3:6.02:0,6,119
chr10	21907290	.	GGC	G	2033.76	PASS	AC=20;AF=0.476;AN=42;BaseQRankSum=5.760;DP=269;FS=0.000;HRun=0;HaplotypeScore=25.6276;InbreedingCoeff=0.7075;MQ=24.68;MQ0=116;MQRankSum=-1.234;QD=21.18;ReadPosRankSum=-0.658;VQSLOD=2.8646;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,3:3:3.01:49,3,0	0/0:3,0:3:9.03:0,9,182	./.	./.	0/0:18,0:18:15.05:0,15,304	1/1:0,6:2:6.02:98,6,0	1/1:0,3:1:3.01:49,3,0	./.	0/0:5,0:1:3.01:0,3,61	1/1:0,11:10:30.10:489,30,0	1/1:0,21:21:17.93:293,18,0	1/1:0,7:5:6.02:98,6,0	1/1:1,12:4:6.02:98,6,0	1/1:0,11:5:9.03:147,9,0	0/0:10,0:1:3.01:0,3,61	0/0:8,0:1:3.01:0,3,61	./.	0/0:8,0:1:3.01:0,3,61	./.	0/0:20,0:20:51.18:0,51,1033	./.	0/0:10,0:10:18.06:0,18,346	1/1:0,10:10:24.08:390,24,0	./.	1/1:0,11:11:30.10:487,30,0	0/0:10,0:7:21.07:0,21,421	0/0:17,0:11:9.03:0,9,182	0/0:13,0:8:12.04:0,12,243
chr10	21909151	.	GA	G	607.83	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.696;DP=643;FS=2.816;HRun=7;HaplotypeScore=66.9750;InbreedingCoeff=0.9980;MQ=78.65;MQ0=0;MQRankSum=-1.529;QD=25.33;ReadPosRankSum=1.322;VQSLOD=4.4551;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,111,1320	0/0:13,0:13:36.12:0,36,453	0/0:20,0:20:39.12:0,39,471	0/0:30,0:30:72.20:0,72,862	0/0:19,0:19:51.15:0,51,629	0/0:22,0:22:57.17:0,57,704	0/0:31,0:31:84.27:0,84,1056	0/0:20,0:20:51.10:0,51,602	0/0:36,0:36:90.26:0,90,1105	0/0:26,0:26:75.22:0,75,920	0/0:18,0:18:42.13:0,42,528	0/0:27,0:27:78.23:0,78,958	0/0:26,0:26:72.22:0,72,891	0/0:27,0:27:81.26:0,81,1018	1/1:2,22:24:69.16:703,69,0	0/0:29,0:29:84.21:0,84,1026	0/0:23,0:23:65.38:0,65,815	0/0:28,0:28:75.24:0,75,944	0/0:11,0:11:29.58:0,30,338	0/0:20,0:20:60.16:0,60,718	0/0:19,0:19:39.12:0,39,491	0/0:24,0:24:66.20:0,66,816	0/0:16,0:16:36.12:0,36,453	0/0:26,0:26:72.22:0,72,893	0/0:17,0:17:48.13:0,48,571	0/0:19,0:19:57.16:0,57,684	0/0:24,0:24:66.19:0,66,806	0/0:9,0:9:27.09:0,27,340
chr10	21909306	.	GCACACACACACACA	G	6718.21	PASS	AB=0.740;AC=25;AF=0.463;AN=54;BaseQRankSum=7.457;DP=610;FS=0.578;HRun=0;HaplotypeScore=232.1538;InbreedingCoeff=0.5000;MQ=55.22;MQ0=15;MQRankSum=-9.096;QD=18.46;ReadPosRankSum=1.935;VQSLOD=3.6228;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:27,16:43:14.34:418,14,0	0/0:12,0:11:12.04:0,12,440	./.	0/0:14,0:4:3.01:0,3,76	0/0:8,0:13:2.86:0,3,19	1/1:13,6:20:21.41:604,21,0	0/1:21,7:28:13.03:272,0,13	0/0:14,0:11:18.06:0,18,419	0/0:10,0:17:12.04:0,12,475	1/1:20,2:24:5.07:426,5,0	0/1:6,4:11:15.82:105,0,16	1/1:17,18:37:24.31:1454,24,0	1/1:10,13:25:28.78:994,29,0	1/1:18,18:37:18.86:701,19,0	0/0:11,0:21:33.11:0,33,1971	0/0:8,0:25:51.18:0,51,2014	0/0:12,0:30:36.10:0,36,1458	0/0:19,0:25:54.16:0,54,1966	0/0:8,0:7:6.02:0,6,219	0/0:19,0:22:23.98:0,24,735	0/0:29,0:31:18.53:0,19,536	1/1:9,3:15:12.91:181,13,0	1/1:7,4:10:3.01:117,3,0	1/1:19,12:31:9.71:354,10,0	1/1:8,21:30:24.08:800,24,0	0/1:18,0:20:95.47:95,0,106	0/1:9,0:18:21.85:124,0,22	0/1:5,0:10:71.65:72,0,142
chr10	21910069	.	G	GT	602.05	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-6.833;DP=686;FS=5.402;HRun=9;HaplotypeScore=63.0620;InbreedingCoeff=0.9960;MQ=76.09;MQ0=0;MQRankSum=-2.935;QD=22.30;ReadPosRankSum=1.338;VQSLOD=4.6772;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:62.98:0,63,547	0/0:8,0:8:24:0,24,208	0/0:10,0:11:26:0,26,214	0/0:16,0:16:35.87:0,36,292	0/0:24,0:24:68.98:0,69,599	0/0:24,0:24:53.95:0,54,465	0/0:22,1:23:29.80:0,30,487	0/0:32,0:34:84.99:0,85,704	0/0:20,0:21:47.02:0,47,397	0/0:22,0:22:53.96:0,54,463	0/0:21,0:21:56.97:0,57,492	0/0:31,0:31:77.97:0,78,677	0/0:32,0:32:86.97:0,87,755	0/0:26,0:26:68.97:0,69,599	1/1:3,24:27:63.17:697,63,0	0/0:25,0:25:65.97:0,66,569	0/0:31,0:31:81.25:0,81,718	0/0:28,0:28:74.95:0,75,646	0/0:20,0:20:56.92:0,57,482	0/0:30,0:30:80.97:0,81,702	0/0:24,0:24:65.98:0,66,573	0/0:20,0:20:50.97:0,51,439	0/0:27,0:27:65.97:0,66,573	0/0:25,0:25:71.94:0,72,618	0/0:29,0:29:77.97:0,78,677	0/0:32,0:32:83.97:0,84,729	0/0:32,0:32:74.95:0,75,651	0/0:19,0:19:56.99:0,57,495
chr10	21910798	.	A	AT	19532.60	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=3.013;DP=706;FS=2.010;HRun=1;HaplotypeScore=108.8491;InbreedingCoeff=0.9985;MQ=85.98;MQ0=1;MQRankSum=-5.401;QD=43.02;ReadPosRankSum=3.052;VQSLOD=4.5213;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,27:27:78.27:1246,78,0	0/0:8,0:8:24.08:0,24,335	0/0:24,0:24:72.21:0,72,951	0/0:23,0:23:69.19:0,69,928	1/1:0,25:25:66.22:1053,66,0	1/1:2,35:37:90.31:1439,90,0	1/1:1,14:15:39.13:621,39,0	0/0:36,0:36:99:0,99,1358	0/0:25,0:25:75.25:0,75,1049	1/1:1,22:23:66.23:1055,66,0	1/1:1,24:25:66.14:1024,66,0	1/1:0,34:35:93.32:1475,93,0	1/1:0,40:40:99:1773,111,0	1/1:0,30:30:87.30:1389,87,0	1/1:2,37:39:99:1678,105,0	0/0:32,0:32:93.31:0,93,1300	0/0:29,0:29:87.29:0,87,1216	0/0:15,0:15:45.15:0,45,629	0/0:19,0:19:57.16:0,57,745	0/0:22,0:22:63.21:0,63,881	0/0:19,0:19:57.19:0,57,797	1/1:1,26:27:66.22:1054,66,0	1/1:1,21:21:56.88:911,57,0	1/1:0,29:29:78.27:1247,78,0	1/1:0,22:22:60.20:958,60,0	1/1:1,30:31:90.29:1411,90,0	1/1:0,21:21:57.19:910,57,0	1/1:0,6:6:18.06:288,18,0
chr10	21914071	.	G	GA	9221.10	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-16.396;DP=688;FS=1.393;HRun=9;HaplotypeScore=72.3696;InbreedingCoeff=0.9864;MQ=71.32;MQ0=0;MQRankSum=-2.265;QD=24.79;ReadPosRankSum=-0.111;VQSLOD=5.4580;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,1:30:41.79:0,42,592	1/1:1,9:10:27.07:299,27,0	0/0:19,0:16:31.75:0,32,254	0/0:15,0:14:19.26:0,19,137	1/1:5,31:36:93.21:1015,93,0	0/0:25,0:25:56.96:0,57,495	0/0:26,0:26:71.98:0,72,625	1/1:7,24:31:40.05:631,40,0	1/1:4,17:21:42.11:465,42,0	0/0:29,0:29:71.97:0,72,625	0/0:18,0:18:41.97:0,42,361	0/0:18,0:18:44.98:0,45,391	0/0:40,0:40:99:0,108,933	0/0:20,0:20:53.11:0,53,463	1/1:3,29:33:58:844,58,0	1/1:9,29:38:12.07:818,12,0	1/1:2,27:29:75.20:830,75,0	1/1:2,21:23:51.14:564,51,0	1/1:1,10:12:9.87:320,10,0	1/1:4,17:21:48.05:504,48,0	1/1:7,22:29:17.07:645,17,0	1/1:2,20:22:57.11:617,57,0	0/0:20,0:20:53.92:0,54,455	0/0:31,0:31:83.98:0,84,729	0/0:25,0:25:68.95:0,69,595	1/1:3,19:23:59.97:627,60,0	1/1:6,29:34:72.50:778,72,0	1/1:0,9:9:24.06:265,24,0
chr10	21914140	.	CT	C	6950.20	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=7.074;DP=599;FS=8.714;HRun=7;HaplotypeScore=66.0491;InbreedingCoeff=0.9456;MQ=73.30;MQ0=0;MQRankSum=-2.642;QD=27.36;ReadPosRankSum=1.939;VQSLOD=5.4827;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,21:24:60.14:612,60,0	0/0:7,0:7:18.06:0,18,226	0/0:13,0:14:27.09:0,27,340	0/1:6,0:6:4:4,0,136	0/0:25,0:25:72.23:0,72,906	1/1:3,19:22:54.12:549,54,0	1/1:0,15:15:42.10:429,42,0	0/0:37,0:37:84.27:0,84,1057	0/0:15,0:15:42.12:0,42,513	1/1:2,28:30:84.19:857,84,0	1/1:1,20:21:60.13:612,60,0	1/1:0,26:26:75.17:765,75,0	1/1:1,35:36:99:1071,105,0	1/1:0,18:18:51.12:520,51,0	0/0:21,0:21:60.17:0,60,731	0/0:17,0:17:51.16:0,51,642	0/0:24,0:24:72.21:0,72,888	0/0:25,0:25:60.18:0,60,740	0/0:18,0:18:45.14:0,45,566	0/0:23,0:23:60.18:0,60,745	0/0:24,0:24:66.21:0,66,828	0/0:20,0:20:48.14:0,48,588	1/1:1,11:12:30.07:306,30,0	1/1:2,14:16:42.09:429,42,0	1/1:1,27:28:78.18:796,78,0	0/0:29,1:30:29.37:0,29,996	0/0:29,0:28:69.21:0,69,850	0/0:16,0:16:48.15:0,48,604
chr10	21917075	.	G	GA	4059.13	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-4.270;DP=439;FS=1.301;HRun=10;HaplotypeScore=80.3004;InbreedingCoeff=0.9187;MQ=74.64;MQ0=0;MQRankSum=0.189;QD=23.46;ReadPosRankSum=1.603;VQSLOD=4.3029;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,7:9:14.20:186,14,0	0/0:7,0:7:17.98:0,18,148	0/0:16,0:17:23.86:0,24,183	0/0:14,1:13:5.95:0,6,107	0/0:26,0:30:68.97:0,69,535	1/1:1,18:19:30.10:519,30,0	1/1:3,6:9:12.03:128,12,0	0/0:22,0:23:43.93:0,44,344	0/0:11,0:11:23.95:0,24,197	1/1:6,14:20:17.49:391,17,0	1/1:4,15:19:1.82:418,2,0	1/1:4,15:19:26.48:477,26,0	1/1:4,10:14:24.06:256,24,0	1/1:0,14:14:36.09:383,36,0	0/0:19,0:19:50.93:0,51,418	0/0:20,0:20:50.93:0,51,419	0/0:16,0:16:44.94:0,45,369	0/0:6,0:6:4.23:0,4,88	0/0:13,0:13:29.95:0,30,246	0/0:28,0:29:70.95:0,71,572	0/0:6,0:6:14.97:0,15,123	0/0:9,0:10:26.01:0,26,203	1/1:0,16:16:41.97:430,42,0	1/1:0,14:14:36.09:384,36,0	1/1:3,16:19:26.49:487,26,0	0/0:16,0:16:38.94:0,39,320	0/0:20,1:23:29.04:0,29,423	0/0:5,0:5:14.98:0,15,123
chr10	21917401	.	TAA	T	3478.26	PASS	AB=0.595;AC=21;AF=0.375;AN=56;BaseQRankSum=7.917;DP=514;FS=4.060;HRun=14;HaplotypeScore=81.2669;InbreedingCoeff=0.9059;MQ=68.16;MQ0=3;MQRankSum=2.506;QD=17.39;ReadPosRankSum=4.243;VQSLOD=3.2640;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:8,2:24:26.03:26,0,112	0/0:4,0:4:9.03:0,9,126	0/0:27,0:13:18.87:0,19,278	0/0:18,0:11:17.02:0,17,137	0/0:25,0:31:89.07:0,89,1078	1/1:1,12:16:29.37:293,29,0	1/1:3,9:12:29.45:245,29,0	0/0:20,0:20:48.16:0,48,655	0/0:12,0:16:38.08:0,38,437	1/1:1,14:18:38.42:374,38,0	1/1:1,16:18:41.71:373,42,0	1/1:3,8:13:23.17:173,23,0	1/1:3,19:23:56.78:511,57,0	1/1:2,16:18:48.04:444,48,0	0/0:3,1:21:12.70:0,13,102	0/0:20,0:23:53.15:0,53,677	0/0:9,0:11:28.80:0,29,352	0/0:12,0:14:22.89:0,23,223	0/0:22,0:23:40.36:0,40,515	0/0:27,0:30:72.97:0,73,951	0/0:6,0:6:18.06:0,18,252	0/0:13,0:14:36.12:0,36,498	1/1:4,17:20:34.73:331,35,0	1/1:2,7:11:17.62:198,18,0	1/1:3,20:24:56.76:511,57,0	0/0:14,0:14:33.11:0,33,453	0/0:19,0:23:62.13:0,62,736	0/0:18,0:19:50.33:0,50,611
chr10	21921720	.	A	AC	1088.73	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-6.289;DP=669;FS=8.827;HRun=5;HaplotypeScore=102.0949;InbreedingCoeff=0.9990;MQ=84.59;MQ0=0;MQRankSum=-0.945;QD=31.11;ReadPosRankSum=1.159;VQSLOD=3.3620;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:90.22:0,90,964	0/0:13,0:13:36.09:0,36,387	0/0:21,0:21:41.72:0,42,570	0/0:26,0:26:58.22:0,58,588	0/0:33,0:33:90.08:0,90,937	0/0:19,0:19:45.11:0,45,483	0/0:27,0:27:72.18:0,72,771	0/0:43,0:43:93.16:0,93,989	0/0:24,0:24:69.17:0,69,740	0/0:26,0:26:56.96:0,57,575	0/0:19,0:19:51.13:0,51,548	0/0:23,0:23:60.15:0,60,644	0/0:23,0:23:66.17:0,66,708	0/0:19,0:19:54.11:0,54,570	1/1:0,35:35:90.29:1184,90,0	0/0:39,0:39:99:0,108,1160	0/0:24,0:24:69.17:0,69,741	0/0:11,0:11:30.04:0,30,309	0/0:22,0:22:57.08:0,57,592	0/0:28,0:28:81.15:0,81,856	0/0:16,0:16:42.11:0,42,451	0/0:19,0:19:51.12:0,51,542	0/0:22,0:22:60.08:0,60,628	0/0:22,0:22:56.79:0,57,582	0/0:24,0:24:63.16:0,63,676	0/0:20,0:20:54.12:0,54,572	0/0:28,0:28:78.09:0,78,803	0/0:11,0:11:33.08:0,33,355
chr10	21925263	.	CA	C	5109.98	PASS	AB=0.834;AC=26;AF=0.464;AN=56;BaseQRankSum=11.378;DP=683;FS=5.944;HRun=11;HaplotypeScore=74.5867;InbreedingCoeff=0.7050;MQ=79.83;MQ0=0;MQRankSum=-0.912;QD=14.90;ReadPosRankSum=2.381;VQSLOD=5.4408;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,23:29:65.89:542,66,0	0/0:11,1:12:5.42:0,5,250	0/1:18,2:19:28.64:29,0,124	0/1:17,0:18:16.99:17,0,68	0/0:36,2:38:40.92:0,41,833	1/1:3,21:24:56.93:468,57,0	1/1:4,16:21:15:319,15,0	0/0:43,1:49:94.56:0,95,1095	0/0:19,0:20:50.93:0,51,504	1/1:5,11:16:32.94:271,33,0	1/1:2,19:23:38.25:454,38,0	1/1:4,23:27:33.94:485,34,0	1/1:4,26:32:75.86:603,76,0	1/1:11,23:34:62.91:517,63,0	1/1:3,17:20:47.94:394,48,0	0/0:41,2:43:58.28:0,58,974	0/0:27,0:27:75.18:0,75,793	0/0:13,0:13:30:0,30,290	0/0:17,0:18:44.89:0,45,443	0/0:33,0:33:81.14:0,81,842	0/1:20,4:25:44.56:45,0,369	0/0:15,0:16:33.75:0,34,317	0/1:3,10:13:8.02:148,0,8	1/1:1,20:21:56.93:468,57,0	1/1:4,15:20:43.98:351,44,0	0/0:33,0:33:72.18:0,72,768	0/0:30,1:31:41.25:0,41,791	0/0:6,0:6:18.05:0,18,192
chr10	21926585	.	C	CG	8451.27	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-12.586;DP=747;FS=8.315;HRun=6;HaplotypeScore=78.1729;InbreedingCoeff=0.9999;MQ=81.52;MQ0=0;MQRankSum=-0.476;QD=28.55;ReadPosRankSum=0.880;VQSLOD=5.2579;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:11,22:33:78.19:913,78,0	0/0:15,0:15:39.08:0,39,397	0/0:25,0:25:36.36:0,36,528	0/0:18,0:18:34.20:0,34,312	0/0:20,0:20:48.09:0,48,480	1/1:5,19:24:51.16:642,51,0	1/1:4,24:28:54.17:679,54,0	0/0:31,0:31:54.01:0,54,528	0/0:23,0:23:63.13:0,63,635	1/1:10,20:30:57.18:715,57,0	1/1:2,13:15:33.10:408,33,0	1/1:1,23:24:63.20:793,63,0	1/1:1,32:33:75.24:943,75,0	1/1:0,20:20:57.18:717,57,0	0/0:37,0:37:96.21:0,96,979	0/0:36,0:36:99:0,99,1007	0/0:27,0:27:72.15:0,72,734	0/0:26,0:26:72.16:0,72,734	0/0:29,0:29:73.22:0,73,710	0/0:26,0:26:66.13:0,66,666	0/0:30,0:30:71.99:0,72,732	0/0:20,0:20:54.11:0,54,549	1/1:2,19:21:42.13:528,42,0	1/1:2,38:40:96.31:1208,96,0	1/1:1,27:28:72.23:905,72,0	0/0:26,0:26:57.11:0,57,580	0/0:46,0:46:99:0,111,1107	0/0:16,0:16:45.10:0,45,458
chr10	21926660	.	T	TA	702.67	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-1.619;DP=713;FS=3.454;HRun=10;HaplotypeScore=73.2595;InbreedingCoeff=0.9895;MQ=73.58;MQ0=0;MQRankSum=-0.009;QD=21.96;ReadPosRankSum=-0.456;VQSLOD=4.4007;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,28:32:75.19:798,75,0	0/0:16,0:16:32.86:0,33,261	0/0:13,0:13:19.41:0,19,207	0/0:14,0:15:25.98:0,26,203	0/0:33,1:35:59.92:0,60,688	0/0:26,0:26:59.89:0,60,489	0/0:15,0:15:29.95:0,30,246	0/0:21,0:21:44.91:0,45,364	0/0:22,0:22:59.87:0,60,485	0/0:27,0:27:71.87:0,72,584	0/0:28,0:28:77.83:0,78,626	0/0:40,0:40:98.84:0,99,807	0/0:33,0:33:71.86:0,72,586	0/0:27,0:27:62.92:0,63,517	0/0:30,0:32:78.95:0,79,624	0/0:30,0:30:62.91:0,63,517	0/0:32,0:32:80.88:0,81,662	0/0:20,0:20:47.92:0,48,391	0/0:24,0:24:65.92:0,66,542	0/0:25,0:25:56.92:0,57,468	0/0:25,0:25:65.91:0,66,542	0/0:23,0:23:53.93:0,54,443	0/0:21,0:21:50.92:0,51,416	0/0:30,0:30:56.89:0,57,464	0/0:27,0:27:68.90:0,69,564	0/0:24,0:24:42.55:0,43,488	0/0:41,0:41:99:0,102,828	0/0:8,0:9:23.01:0,23,178
chr10	21927409	.	A	ATG	12701.06	PASS	AB=0.594;AC=32;AF=0.571;AN=56;BaseQRankSum=-2.851;DP=679;FS=10.107;HRun=0;HaplotypeScore=96.3290;InbreedingCoeff=0.8465;MQ=58.13;MQ0=9;MQRankSum=-0.262;QD=29.96;ReadPosRankSum=4.713;VQSLOD=6.6295;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,32:38:62.86:984,63,0	0/0:16,0:16:36.11:0,36,451	0/0:26,0:9:2.92:0,3,102	0/0:25,0:9:13.96:0,14,136	1/1:2,25:28:12.76:711,13,0	1/1:4,27:31:9.58:986,10,0	0/1:8,14:22:1.69:512,0,2	0/0:36,0:36:69.15:0,69,778	0/0:17,0:17:42.09:0,42,487	1/1:11,13:23:44.79:813,45,0	1/1:8,19:27:54.03:867,54,0	1/1:0,19:20:36.12:598,36,0	1/1:6,21:26:48.11:790,48,0	1/1:3,15:18:27.09:445,27,0	1/1:9,19:28:72.25:1190,72,0	0/0:21,0:21:57.14:0,57,678	0/0:22,0:22:54.13:0,54,650	0/0:12,0:12:36.12:0,36,454	0/0:20,0:19:37.79:0,38,411	0/0:33,0:33:90.19:0,90,1079	0/0:26,0:26:66.19:0,66,809	0/1:4,11:15:13.73:324,0,14	1/1:1,21:21:24.08:397,24,0	1/1:2,17:20:45.15:747,45,0	1/1:5,24:29:48.16:779,48,0	1/1:8,16:25:51.12:790,51,0	1/1:5,31:36:75.25:1220,75,0	1/1:3,11:14:33.11:547,33,0
chr10	21927612	.	G	GT	4433.13	PASS	AB=1.000;AC=53;AF=0.946;AN=56;BaseQRankSum=-1.692;DP=443;FS=15.313;HRun=6;HaplotypeScore=127.9405;InbreedingCoeff=0.6049;MQ=68.94;MQ0=0;MQRankSum=-4.998;QD=10.19;ReadPosRankSum=2.417;VQSLOD=2.1333;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,0:10:20.33:67,20,0	1/1:7,0:7:11.36:69,11,0	0/1:13,0:13:8.62:9,0,153	0/0:7,0:8:16.25:0,16,114	1/1:21,0:21:27.60:127,28,0	1/1:16,1:17:37.43:179,37,0	1/1:10,0:10:22.74:105,23,0	1/1:27,0:27:74.36:552,74,0	1/1:13,0:13:25.61:93,26,0	1/1:23,0:23:57.08:301,57,0	1/1:24,1:25:20.24:187,20,0	1/1:16,0:16:25.88:120,26,0	1/1:11,1:12:12.51:113,13,0	1/1:9,0:9:7.30:52,7,0	1/1:24,0:24:45.37:238,45,0	1/1:13,0:13:30.82:140,31,0	1/1:14,0:14:31.28:107,31,0	1/1:11,0:11:19.06:87,19,0	1/1:17,0:17:29.75:156,30,0	1/1:24,0:24:47.99:233,48,0	1/1:10,0:10:27.15:160,27,0	1/1:11,2:13:31.41:206,31,0	1/1:18,0:18:37.98:200,38,0	1/1:6,0:6:12.17:44,12,0	1/1:25,0:25:54.11:264,54,0	1/1:21,0:21:49.42:258,49,0	1/1:27,0:27:54.26:240,54,0	1/1:9,0:9:22.92:126,23,0
chr10	21927811	.	T	TGATTCGTCCCAG	27391.86	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-3.162;DP=449;FS=119.226;HRun=0;HaplotypeScore=158.7723;InbreedingCoeff=0.9311;MQ=90.51;MQ0=0;MQRankSum=-13.053;QD=122.29;ReadPosRankSum=2.534;VQSLOD=1.8008;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,9:17:36.55:1828,37,0	0/0:10,0:10:27.08:0,27,922	0/0:23,0:23:54.19:0,54,1771	0/0:24,0:24:62.93:0,63,1789	1/1:4,0:4:2.99:24,3,0	1/1:9,8:17:48.15:2518,48,0	1/1:15,6:21:51.11:2394,51,0	0/0:28,0:28:81.23:0,81,2636	0/0:21,0:21:57.19:0,57,1874	1/1:5,1:6:15.05:709,15,0	1/1:6,2:9:21.07:944,21,0	1/1:10,12:22:66.22:3546,66,0	1/1:12,5:18:48.12:2196,48,0	1/1:7,5:13:36.08:1794,36,0	1/1:7,13:20:60.21:3352,60,0	0/0:23,0:23:63.15:0,63,2029	0/0:23,0:23:59.97:0,60,1902	0/0:10,0:10:30.10:0,30,985	0/0:18,0:18:48.13:0,48,1275	0/0:32,0:32:93.30:0,93,3099	0/0:13,0:13:30.10:0,30,1052	1/1:3,1:4:6.02:232,6,0	1/1:8,3:11:21.07:954,21,0	1/1:8,3:11:18.05:888,18,0	1/1:8,7:15:36.02:1608,36,0	1/1:5,4:12:33.11:1706,33,0	1/1:4,11:20:42.14:2514,42,0	1/1:0,1:4:3.01:183,3,0
chr10	21928021	.	C	CTT	26352.23	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=3.331;DP=741;FS=0.603;HRun=1;HaplotypeScore=99.2807;InbreedingCoeff=0.9995;MQ=78.09;MQ0=0;MQRankSum=-6.013;QD=53.02;ReadPosRankSum=6.433;VQSLOD=4.5567;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,39:39:99:2183,108,0	0/0:12,0:12:27.09:0,27,421	0/0:28,0:28:75.23:0,75,1160	0/0:21,0:21:63.01:0,63,846	1/1:0,36:37:99:1815,99,0	1/1:0,27:31:66.23:1330,66,0	1/1:0,23:23:57.20:1154,57,0	0/0:30,0:30:87.26:0,87,1330	0/0:25,0:25:75.23:0,75,1174	1/1:1,32:33:96.33:1949,96,0	1/1:0,38:38:99:2139,111,0	1/1:1,27:29:69.23:1394,69,0	1/1:0,28:28:78.27:1580,78,0	1/1:0,28:28:78.27:1578,78,0	1/1:0,29:30:72.25:1462,72,0	0/0:29,0:29:84.27:0,84,1343	0/0:26,0:26:78.27:0,78,1271	0/0:13,0:13:39.11:0,39,608	0/0:20,0:20:60.20:0,60,975	0/0:32,0:32:87.27:0,87,1351	0/0:8,0:8:24.06:0,24,363	1/1:0,20:20:57.15:1111,57,0	1/1:0,34:35:87.19:1711,87,0	1/1:0,14:14:33.11:669,33,0	1/1:0,34:35:93.32:1886,93,0	1/1:0,30:32:93.31:1842,93,0	1/1:1,29:30:84.28:1697,84,0	1/1:0,15:15:42.14:852,42,0
chr10	21928118	.	CT	C	4540.81	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=18.749;DP=532;FS=7.987;HRun=1;HaplotypeScore=167.7453;InbreedingCoeff=0.9890;MQ=83.88;MQ0=0;MQRankSum=-17.552;QD=19.92;ReadPosRankSum=6.457;VQSLOD=4.4861;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,9:10:29.77:222,30,0	0/0:16,0:16:48.16:0,48,767	0/0:24,0:24:68.36:0,68,1052	0/0:17,0:17:51.17:0,51,811	1/1:3,19:22:31.35:227,31,0	1/1:3,19:22:59.60:457,60,0	1/1:1,11:12:35.25:265,35,0	0/0:30,0:30:87.26:0,87,1307	0/0:27,0:27:78.25:0,78,1224	1/1:1,13:14:41.96:361,42,0	1/1:1,9:10:23.37:166,23,0	1/1:2,15:17:47.82:374,48,0	1/1:2,21:23:65.62:499,66,0	1/1:1,14:15:41.76:316,42,0	0/0:34,0:34:99:0,102,1628	0/0:46,0:46:99:0,138,2184	0/0:28,0:28:84.29:0,84,1343	0/0:18,0:18:48.16:0,48,764	0/0:14,0:14:42.14:0,42,670	0/0:19,0:19:51:0,51,792	0/0:31,0:31:93.32:0,93,1484	1/1:1,15:16:29.24:214,29,0	1/1:0,9:9:16.45:116,16,0	1/1:0,8:8:20.90:160,21,0	1/1:0,13:13:38.86:304,39,0	1/1:3,12:15:41.93:352,42,0	1/1:1,18:19:53.84:433,54,0	1/1:0,3:3:8.99:76,9,0
chr10	21928120	.	ATGTT	A	7652.27	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=18.636;DP=518;FS=8.068;HRun=0;HaplotypeScore=185.0053;InbreedingCoeff=0.9893;MQ=85.77;MQ0=0;MQRankSum=-17.547;QD=35.26;ReadPosRankSum=6.921;VQSLOD=4.0065;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,9:9:27.09:358,27,0	0/0:16,0:16:48.16:0,48,1299	0/0:26,0:26:78.19:0,78,1956	0/0:17,0:17:51.14:0,51,1250	1/1:1,19:20:33.93:408,34,0	1/1:1,19:20:56.67:742,57,0	1/1:1,11:12:36.05:449,36,0	0/0:29,0:29:84.29:0,84,2429	0/0:26,0:26:75.26:0,75,2127	1/1:0,13:13:39.13:547,39,0	1/1:0,9:9:24.04:304,24,0	1/1:1,15:16:48.13:634,48,0	1/1:0,22:22:66.22:893,66,0	1/1:0,15:15:42.14:572,42,0	0/0:34,0:34:99:0,102,2936	0/0:45,0:45:99:0,135,3766	0/0:28,0:28:84.29:0,84,2415	0/0:17,0:17:48.12:0,48,1299	0/0:15,0:15:45.15:0,45,1299	0/0:17,0:17:48.16:0,48,1346	0/0:31,0:31:93.32:0,93,2694	1/1:1,15:16:29.93:383,30,0	1/1:0,9:9:16.87:209,17,0	1/1:0,8:8:21.07:276,21,0	1/1:0,13:13:39.13:522,39,0	1/1:1,12:13:39.10:516,39,0	1/1:1,18:19:54.16:712,54,0	1/1:0,3:3:9.03:127,9,0
chr10	21928125	.	CTGTG	C	7575	PASS	AB=0.521;AC=30;AF=0.536;AN=56;BaseQRankSum=18.405;DP=518;FS=7.386;HRun=0;HaplotypeScore=184.7243;InbreedingCoeff=0.8554;MQ=84.86;MQ0=0;MQRankSum=-17.540;QD=34.91;ReadPosRankSum=8.597;VQSLOD=3.6804;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:0,9:9:24.08:336,24,0	0/0:15,0:15:45.15:0,45,1304	0/0:28,0:28:84.23:0,84,2183	0/0:14,0:14:42.06:0,42,1034	1/1:0,19:19:33.07:425,33,0	0/1:2,19:21:2.23:717,0,2	1/1:0,11:11:30.10:427,30,0	0/0:31,0:31:90.31:0,90,2492	0/0:27,0:27:78.24:0,78,2129	1/1:1,13:14:4.86:530,5,0	1/1:0,9:9:21.07:290,21,0	1/1:0,15:15:45.15:639,45,0	1/1:0,22:22:66.22:941,66,0	1/1:1,14:16:10.78:550,11,0	0/0:34,0:34:99:0,102,2952	0/0:43,0:43:99:0,129,3706	0/0:29,0:29:87.30:0,87,2472	0/0:16,0:16:45.15:0,45,1301	0/0:15,0:15:42.14:0,42,1145	0/0:17,0:17:45.15:0,45,1254	0/0:32,0:32:96.33:0,96,2760	0/1:1,15:16:4.57:343,0,5	1/1:0,9:9:16.60:212,17,0	1/1:0,8:8:21.07:306,21,0	1/1:0,13:13:39.13:543,39,0	1/1:1,12:13:7.21:487,7,0	1/1:1,18:19:19.54:693,20,0	1/1:0,3:3:9.03:136,9,0
chr10	21928130	.	G	GAAGCACC	9250.92	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=16.499;DP=602;FS=5.992;HRun=0;HaplotypeScore=251.0601;InbreedingCoeff=0.9961;MQ=84.73;MQ0=0;MQRankSum=-17.988;QD=32.12;ReadPosRankSum=3.644;VQSLOD=3.8833;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:13:31.13:472,31,0	0/0:15,0:15:45.10:0,45,1096	0/0:32,0:32:67.59:0,68,1886	0/0:17,0:17:41.32:0,41,940	1/1:22,0:22:33.33:510,33,0	1/1:27,2:28:72.99:1103,73,0	1/1:15,0:15:33.86:493,34,0	0/0:33,0:33:93.30:0,93,2248	0/0:26,0:26:75.24:0,75,1931	1/1:15,1:16:47.32:761,47,0	1/1:12,0:12:20.96:304,21,0	1/1:20,0:20:55.75:803,56,0	1/1:26,0:26:66.06:625,66,0	1/1:20,1:22:46.50:1151,47,0	0/0:37,0:37:99:0,108,2848	0/0:45,0:45:99:0,129,3294	0/0:28,0:28:84.26:0,84,2193	0/0:17,0:17:48.14:0,48,1186	0/0:14,0:14:39.13:0,39,1023	0/0:16,0:16:34.28:0,34,840	0/0:34,0:34:96.26:0,96,2402	1/1:17,1:19:25.37:205,25,0	1/1:14,0:14:15.12:142,15,0	1/1:11,0:11:26.39:177,26,0	1/1:17,0:17:36.13:649,36,0	1/1:19,1:20:52.07:668,52,0	1/1:24,1:25:62.85:777,63,0	1/1:7,0:7:20.78:411,21,0
chr10	21928714	.	CGTGT	C	2579.28	PASS	AB=0.706;AC=33;AF=0.611;AN=54;BaseQRankSum=4.758;DP=615;FS=0.667;HRun=0;HaplotypeScore=152.2214;InbreedingCoeff=0.7479;MQ=61.45;MQ0=7;MQRankSum=0.100;QD=7.37;ReadPosRankSum=5.428;VQSLOD=2.6458;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:36:12.01:112,12,0	0/0:8,0:8:10.28:0,10,190	./.	0/0:26,0:17:3.01:0,3,45	1/1:18,0:31:12.48:113,12,0	1/1:17,13:31:24.07:357,24,0	1/1:11,6:17:9.02:121,9,0	0/0:35,0:35:34.06:0,34,651	0/0:13,0:20:12.04:0,12,194	1/1:13,5:18:11.99:142,12,0	1/1:11,5:15:5.99:94,6,0	1/1:12,5:18:11.84:169,12,0	1/1:14,3:17:9.03:141,9,0	1/1:19,6:25:14.91:216,15,0	0/1:14,2:24:30.12:80,0,30	0/0:19,0:25:12:0,12,191	0/0:19,0:29:2.32:0,2,51	0/0:10,0:10:15.05:0,15,332	0/0:15,0:15:12.51:0,13,245	0/0:15,0:22:5.95:0,6,70	0/0:51,0:50:36.54:0,37,605	1/1:9,0:16:15.49:141,15,0	1/1:15,0:17:6:56,6,0	1/1:14,5:19:15.05:235,15,0	1/1:4,6:10:12.04:188,12,0	1/1:17,0:26:24.03:223,24,0	1/1:10,0:16:18.02:167,18,0	1/1:4,0:12:24.03:223,24,0
chr10	21930566	.	T	TAA	6935.17	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=2.855;DP=549;FS=2.344;HRun=11;HaplotypeScore=105.1036;InbreedingCoeff=0.9472;MQ=73.54;MQ0=0;MQRankSum=-6.162;QD=19.87;ReadPosRankSum=-3.194;VQSLOD=3.6145;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,20:23:45.15:652,45,0	0/0:13,0:13:36.03:0,36,342	0/0:20,0:21:27.49:0,27,199	0/0:13,0:13:10.72:0,11,132	1/1:6,31:37:90.10:1185,90,0	1/1:9,1:19:24.04:235,24,0	1/1:9,1:19:36.06:351,36,0	0/0:28,0:29:62.42:0,62,565	0/0:13,0:13:29.97:0,30,291	1/1:14,1:20:36.07:378,36,0	1/1:20,0:30:39.54:389,40,0	1/1:9,0:18:27.04:258,27,0	1/1:14,0:19:22.05:207,22,0	1/1:10,0:15:21.03:201,21,0	1/1:4,15:21:39.13:545,39,0	0/0:18,0:18:45.02:0,45,436	0/0:30,0:30:72.02:0,72,698	0/0:16,0:17:38.78:0,39,361	0/0:20,0:20:38.97:0,39,370	0/0:21,0:22:31.89:0,32,392	0/0:3,0:3:5.99:0,6,58	1/1:4,12:18:32.50:372,32,0	1/1:13,1:21:27.05:273,27,0	1/1:6,1:12:6.01:57,6,0	1/1:9,0:22:45.08:439,45,0	1/1:6,16:23:51.14:696,51,0	1/1:4,22:26:41.94:608,42,0	1/1:1,5:6:6.02:87,6,0
chr10	21932366	.	A	ATGACTGTT	9693.84	PASS	AB=0.724;AC=11;AF=0.196;AN=56;BaseQRankSum=-4.955;DP=689;FS=1.997;HRun=0;HaplotypeScore=170.3359;InbreedingCoeff=0.8828;MQ=92.78;MQ0=0;MQRankSum=-13.618;QD=70.25;ReadPosRankSum=-0.211;VQSLOD=5.0301;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,19:31:48.12:1835,48,0	0/0:13,0:13:33.11:0,33,813	0/0:32,0:32:80.98:0,81,1974	0/0:34,0:34:74.14:0,74,1781	1/1:3,9:12:27.09:864,27,0	0/0:25,0:25:57.15:0,57,1443	0/0:22,0:22:51.18:0,51,1358	0/0:31,0:31:75.26:0,75,1969	0/0:25,0:24:66.23:0,66,1723	0/0:27,0:27:75.21:0,75,1753	0/0:14,0:14:36.12:0,36,971	0/0:32,0:32:87.26:0,87,2156	0/0:25,0:25:54.08:0,54,1415	0/0:20,0:20:54.19:0,54,1457	0/0:28,0:28:72.25:0,72,1924	0/0:30,0:30:72.25:0,72,1894	0/0:34,0:34:96.31:0,96,2467	0/0:15,0:15:36.12:0,36,948	0/0:22,0:20:48.16:0,48,1206	0/0:21,0:21:51.17:0,51,1358	0/0:40,0:40:99:0,105,2794	1/1:10,14:26:53.96:1915,54,0	0/0:17,0:17:48.16:0,48,1258	0/0:28,0:28:69.02:0,69,1802	0/0:16,0:16:45.15:0,45,1196	0/1:13,8:21:50.83:1049,0,51	1/1:11,24:36:90.19:3495,90,0	1/1:7,5:12:15.02:536,15,0
chr10	21932462	.	AT	A	8133.10	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=9.110;DP=675;FS=4.537;HRun=2;HaplotypeScore=103.7299;InbreedingCoeff=0.9908;MQ=85.88;MQ0=6;MQRankSum=-1.443;QD=36.47;ReadPosRankSum=2.592;VQSLOD=5.0456;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:25:66.22:0,66,988	0/0:9,0:9:24.07:0,24,339	0/0:26,0:26:72.09:0,72,1008	0/0:21,0:21:63.21:0,63,920	0/0:21,0:20:60.20:0,60,899	1/1:1,24:25:72.23:935,72,0	1/1:0,27:27:72.23:935,72,0	0/0:32,0:32:93.27:0,93,1351	0/0:22,0:22:66.22:0,66,989	1/1:1,17:18:51.17:662,51,0	1/1:0,14:14:42.14:545,42,0	1/1:2,20:22:60.19:779,60,0	1/1:0,29:29:84.27:1091,84,0	1/1:0,21:21:60.19:777,60,0	0/0:30,0:30:90.30:0,90,1349	0/0:29,0:29:87.29:0,87,1303	0/0:34,0:34:96.33:0,96,1438	0/0:25,0:25:75.25:0,75,1124	0/0:24,0:24:72.24:0,72,1075	0/0:23,0:23:66.22:0,66,989	0/0:63,0:63:99:0,187,2717	0/0:19,0:14:42.14:0,42,627	1/1:0,18:18:54.18:701,54,0	1/1:1,33:34:90.29:1162,90,0	1/1:1,14:15:42.14:545,42,0	0/0:18,1:18:12.34:0,12,680	0/0:18,0:14:39.13:0,39,584	0/0:6,0:4:12.04:0,12,180
chr10	21932511	.	TC	T	2821.24	PASS	AB=0.932;AC=43;AF=0.768;AN=56;BaseQRankSum=3.654;DP=590;FS=2.962;HRun=2;HaplotypeScore=124.5085;InbreedingCoeff=0.1121;MQ=58.42;MQ0=32;MQRankSum=4.524;QD=5.37;ReadPosRankSum=5.658;VQSLOD=0.9063;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,10:5:2.86:38,3,0	1/1:9,0:9:9.72:37,10,0	0/0:28,0:8:24.07:0,24,305	0/0:37,0:16:41.83:0,42,528	1/1:5,10:8:12.04:153,12,0	1/1:25,0:24:19.59:112,20,0	1/1:31,1:30:34.16:134,34,0	0/1:31,0:30:99:160,0,159	1/1:18,3:20:31.73:122,32,0	0/1:21,1:21:59.84:127,0,60	1/1:18,0:18:28.18:105,28,0	0/1:24,0:24:26.27:79,0,26	0/1:25,0:25:9.25:82,0,9	0/1:16,0:16:5.57:60,0,6	1/1:14,1:14:33.34:126,33,0	1/1:25,2:27:38.96:224,39,0	0/1:21,3:23:0.57:139,0,1	0/1:18,1:18:1.16:111,0,1	0/1:24,2:24:99:117,0,143	1/1:11,0:11:16.91:54,17,0	1/1:36,1:35:44.72:258,45,0	1/1:4,16:11:15.05:188,15,0	1/1:19,0:19:27.18:105,27,0	1/1:24,0:24:24.06:136,24,0	1/1:19,1:19:30.24:124,30,0	1/1:3,7:5:8.32:119,8,0	0/1:6,6:6:10.92:32,0,11	1/1:1,6:1:3.01:38,3,0
chr10	21933234	.	C	CTT	5418.27	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=2.628;DP=787;FS=17.354;HRun=8;HaplotypeScore=98.5325;InbreedingCoeff=0.9983;MQ=76.23;MQ0=0;MQRankSum=-3.514;QD=28.52;ReadPosRankSum=-1.515;VQSLOD=3.0551;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,26:33:66.23:1045,66,0	0/0:11,0:11:27.07:0,27,301	0/0:20,0:19:48.20:0,48,473	0/0:14,0:15:18.91:0,19,198	1/1:0,30:30:87.29:1351,87,0	0/0:32,0:32:87.20:0,87,960	0/0:31,0:31:84.21:0,84,936	0/0:29,0:29:72.15:0,72,789	0/0:32,0:32:90.24:0,90,1003	0/0:37,0:37:99:0,102,1137	0/0:22,0:21:54.13:0,54,601	0/0:31,0:31:81.19:0,81,893	0/0:27,0:27:72.17:0,72,803	0/0:31,0:31:81.18:0,81,885	0/0:38,0:38:99:0,99,1094	0/0:32,0:32:93.23:0,93,1028	0/0:32,0:32:84.18:0,84,926	0/0:10,0:10:30.08:0,30,334	0/0:28,0:28:63.13:0,63,696	0/0:30,0:30:69.17:0,69,768	0/0:36,0:36:99:0,102,1137	1/1:9,28:38:78.13:1119,78,0	0/0:21,0:22:38.88:0,39,493	0/0:27,0:29:66.09:0,66,785	0/0:21,0:21:48.13:0,48,535	1/1:9,1:42:74.77:1009,75,0	1/1:3,0:28:57.09:545,57,0	1/1:7,0:19:36.03:349,36,0
chr10	21933708	.	CCTGCCGAG	C	3578.45	PASS	AC=12;AF=0.273;AN=44;BaseQRankSum=7.274;DP=464;FS=7.215;HRun=0;HaplotypeScore=75.1032;InbreedingCoeff=0.7572;MQ=32.95;MQ0=148;MQRankSum=-1.195;QD=41.61;ReadPosRankSum=2.825;VQSLOD=2.6898;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,4:2:3.01:84,3,0	0/0:6,0:4:9.03:0,9,394	0/0:30,0:4:9.03:0,9,307	0/0:29,0:5:9.03:0,9,317	1/1:2,16:16:24.08:671,24,0	0/0:16,0:3:6.02:0,6,155	./.	./.	0/0:21,0:6:9.03:0,9,336	0/0:17,0:9:21.07:0,21,772	0/0:14,0:10:3:0,3,68	0/0:20,0:5:6.02:0,6,262	0/0:26,0:7:15.05:0,15,577	0/0:18,0:10:6.49:0,6,263	0/0:19,0:7:12.04:0,12,525	0/0:29,0:10:12.04:0,12,410	0/0:9,0:4:6.02:0,6,263	./.	./.	0/0:21,0:16:23.76:0,24,867	./.	1/1:1,12:13:27.09:726,27,0	0/0:15,0:11:5.98:0,6,73	./.	0/0:20,0:16:30.08:0,30,805	1/1:7,14:15:33.11:923,33,0	1/1:6,10:9:21.07:587,21,0	1/1:2,7:7:21.07:587,21,0
chr10	21934371	.	AC	A	8575.97	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=12.694;DP=730;FS=10.573;HRun=4;HaplotypeScore=83.9355;InbreedingCoeff=0.9999;MQ=81.63;MQ0=0;MQRankSum=-0.767;QD=32.12;ReadPosRankSum=3.646;VQSLOD=4.9026;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:48.16:0,48,666	0/0:12,0:12:33.07:0,33,440	0/0:26,0:26:63.16:0,63,805	0/0:20,0:20:47.34:0,47,603	0/0:34,0:34:90.26:0,90,1233	1/1:2,16:18:45.03:519,45,0	1/1:0,25:25:69.14:810,69,0	0/0:45,0:45:99:0,126,1701	0/0:32,0:32:96.30:0,96,1323	1/1:1,31:32:67.50:1076,67,0	1/1:2,18:20:51.11:594,51,0	1/1:1,33:34:90.28:1080,90,0	1/1:0,38:38:99:1259,105,0	1/1:0,30:30:78.24:936,78,0	0/0:32,0:32:87.28:0,87,1198	0/0:29,0:29:81.25:0,81,1104	0/0:29,0:29:87.29:0,87,1216	0/0:26,0:26:75.25:0,75,1039	0/0:19,0:19:54.17:0,54,737	0/0:29,0:29:87.26:0,87,1180	0/0:17,0:17:51.16:0,51,697	0/0:25,0:25:66.15:0,66,887	1/1:1,19:20:51.07:592,51,0	1/1:0,19:19:57.17:684,57,0	1/1:0,31:31:87.21:1026,87,0	0/0:24,0:24:72.14:0,72,936	0/0:32,0:32:93.27:0,93,1249	0/0:14,0:14:36.12:0,36,504
chr10	21934717	.	TGA	T	4221.39	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=14.243;DP=788;FS=8.773;HRun=0;HaplotypeScore=120.9563;InbreedingCoeff=0.9991;MQ=85.84;MQ0=0;MQRankSum=-12.121;QD=34.32;ReadPosRankSum=-0.636;VQSLOD=6.6954;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,20:21:45.15:642,45,0	0/0:15,0:15:45.15:0,45,801	0/0:36,0:36:94.11:0,94,1519	0/0:27,0:27:71.99:0,72,1258	1/1:4,29:33:72.21:1026,72,0	0/0:24,0:24:72.25:0,72,1307	0/0:32,0:32:93.30:0,93,1652	0/0:31,0:31:90.31:0,90,1646	0/0:26,0:26:72.23:0,72,1268	0/0:29,0:29:87.30:0,87,1587	0/0:20,0:20:51.16:0,51,904	0/0:36,0:36:99:0,102,1801	0/0:46,0:46:99:0,135,2335	0/0:44,0:44:99:0,129,2331	0/0:51,0:51:99:0,135,2405	0/0:36,0:36:99:0,102,1830	0/0:19,0:19:57.20:0,57,1026	0/0:7,0:7:21.07:0,21,385	0/0:22,0:22:63.21:0,63,1126	0/0:32,0:32:93.32:0,93,1704	0/0:30,0:30:87.30:0,87,1585	1/1:3,18:21:51.16:709,51,0	0/0:37,0:37:99:0,102,1869	0/0:31,0:31:90.29:0,90,1610	0/0:34,0:34:96.04:0,96,1730	1/1:2,17:19:51.17:729,51,0	1/1:4,14:18:51.12:687,51,0	1/1:3,7:10:30.10:427,30,0
chr10	21934736	.	GA	G	4675.97	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=16.629;DP=760;FS=12.815;HRun=1;HaplotypeScore=106.0390;InbreedingCoeff=0.9991;MQ=80.60;MQ0=0;MQRankSum=-10.950;QD=37.41;ReadPosRankSum=-1.348;VQSLOD=3.0413;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,22:21:57.19:793,57,0	0/0:11,0:11:33.11:0,33,527	0/0:30,0:30:87.18:0,87,1290	0/0:19,0:19:56.33:0,56,789	1/1:3,26:28:72.16:965,72,0	0/0:23,0:23:69.24:0,69,1100	0/0:27,0:27:81.26:0,81,1264	0/0:39,0:39:99:0,114,1798	0/0:21,0:21:63.21:0,63,1006	0/0:35,0:35:99:0,102,1561	0/0:17,0:17:45.15:0,45,718	0/0:33,0:33:99:0,99,1578	0/0:43,0:43:99:0,129,1969	0/0:43,0:43:99:0,129,2049	0/0:43,0:43:99:0,129,1987	0/0:36,0:36:99:0,108,1698	0/0:25,0:25:75.17:0,75,1101	0/0:7,0:7:21.07:0,21,335	0/0:20,0:20:60.19:0,60,934	0/0:32,0:32:96.31:0,96,1506	0/0:28,0:28:81.26:0,81,1266	1/1:0,26:26:69.23:956,69,0	0/0:37,0:37:99:0,111,1745	0/0:34,0:34:99:0,102,1624	0/0:32,0:32:96.32:0,96,1505	1/1:0,19:19:57.19:793,57,0	1/1:0,17:17:51.17:710,51,0	1/1:0,12:12:33.11:460,33,0
chr10	21934899	.	C	CA	5598.96	PASS	AB=0.589;AC=11;AF=0.196;AN=56;BaseQRankSum=9.884;DP=758;FS=3.467;HRun=4;HaplotypeScore=86.3079;InbreedingCoeff=0.8868;MQ=85.01;MQ0=0;MQRankSum=-12.852;QD=33.33;ReadPosRankSum=-1.171;VQSLOD=4.8143;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,16:20:42.02:530,42,0	0/0:11,0:11:30.08:0,30,332	0/0:28,0:28:78.21:0,78,872	0/0:22,0:22:51:0,51,558	1/1:5,31:36:87.26:1155,87,0	0/0:27,0:27:72.17:0,72,796	0/0:26,0:26:72.20:0,72,816	0/0:35,0:35:96.26:0,96,1075	0/0:17,0:17:42.12:0,42,476	0/0:30,0:30:84.21:0,84,930	0/0:24,0:24:72.20:0,72,808	0/0:28,0:28:84.21:0,84,933	0/0:44,0:44:99:0,120,1360	0/0:40,0:40:99:0,114,1273	0/0:36,0:36:99:0,105,1181	0/0:41,0:41:99:0,120,1352	0/0:20,0:20:57.16:0,57,647	0/0:19,0:19:54.13:0,54,600	0/0:17,0:17:45.13:0,45,511	0/0:27,0:27:78.22:0,78,885	0/0:21,0:21:60.17:0,60,680	1/1:3,32:35:99:1384,105,0	0/0:31,0:31:87.25:0,87,986	0/0:22,0:22:63.18:0,63,714	0/0:24,0:24:72.21:0,72,816	0/1:10,23:33:39.91:989,0,40	1/1:2,22:24:63.20:844,63,0	1/1:2,17:18:51.17:697,51,0
chr10	21934927	.	G	GA	4664.12	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=16.217;DP=800;FS=17.210;HRun=8;HaplotypeScore=97.0340;InbreedingCoeff=0.9720;MQ=76.94;MQ0=0;MQRankSum=-8.034;QD=25.21;ReadPosRankSum=-0.738;VQSLOD=3.3352;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:9,14:22:30.04:330,30,0	0/0:10,0:10:30.02:0,30,275	0/0:24,0:24:59.93:0,60,526	0/0:19,0:19:21.41:0,21,299	1/1:4,38:42:99:1210,105,0	0/0:27,0:27:68.35:0,68,677	0/0:27,0:27:71.99:0,72,649	0/0:34,0:34:81.01:0,81,736	0/0:23,0:23:65.94:0,66,589	0/0:41,0:41:99:0,117,1065	0/0:20,0:20:54.02:0,54,493	0/0:32,0:32:84.03:0,84,765	0/0:38,1:39:70.40:0,70,889	0/0:42,0:42:99:0,105,943	0/0:34,0:34:93:0,93,843	0/0:45,0:45:99:0,123,1112	0/0:24,0:24:60.01:0,60,545	0/0:20,0:20:54.02:0,54,494	0/0:16,0:17:38.05:0,38,336	0/0:27,0:27:77.97:0,78,700	0/0:22,0:22:60.03:0,60,549	1/1:7,31:39:68.65:1016,69,0	0/0:34,0:34:83.19:0,83,766	0/0:21,0:21:48.02:0,48,439	0/0:33,0:33:90.02:0,90,819	1/1:9,25:34:4.75:779,5,0	1/1:3,22:26:63.02:705,63,0	1/1:0,21:21:54.16:623,54,0
chr10	21936063	.	TACACACACACACACACACACACACACACACACAC	T	5026.88	PASS	AB=1.000;AC=17;AF=0.315;AN=54;BaseQRankSum=3.115;DP=646;FS=7.357;HRun=0;HaplotypeScore=361.9060;InbreedingCoeff=0.7712;MQ=57.48;MQ0=58;MQRankSum=-5.713;QD=32.64;ReadPosRankSum=-0.948;VQSLOD=1.8484;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:54.19:0,54,3791	1/1:1,11:12:9.03:777,9,0	./.	0/0:78,0:15:2.98:0,3,43	0/0:16,0:16:24.52:0,25,1234	0/0:13,0:12:27.07:0,27,2631	0/0:22,0:22:33.10:0,33,2291	1/1:24,0:24:30.08:402,30,0	1/1:7,9:16:6.02:518,6,0	0/0:18,0:17:36.11:0,36,3029	0/0:15,0:15:17.42:0,17,1859	0/0:17,0:28:22.89:0,23,2115	0/0:13,0:18:36.59:0,37,3438	0/0:14,0:19:30.08:0,30,2416	0/0:16,0:20:30.57:0,31,2772	1/1:5,21:26:21.07:1813,21,0	1/1:4,9:13:3.01:171,3,0	1/1:2,3:4:3.01:259,3,0	1/1:9,0:9:12.02:136,12,0	1/1:7,16:23:20.93:860,21,0	0/1:26,0:23:89.93:90,0,321	0/0:25,0:25:35.73:0,36,2141	0/0:16,0:18:27.56:0,28,3133	0/0:41,0:45:87.75:0,88,10661	0/0:19,0:18:36.11:0,36,2625	0/0:14,0:14:30.10:0,30,1757	0/0:25,0:25:34.63:0,35,1875	0/0:2,0:7:6.02:0,6,414
chr10	21937620	.	TTTATTATTATTA	T	3631.34	PASS	AB=0.594;AC=28;AF=0.538;AN=52;BaseQRankSum=2.505;DP=239;FS=4.265;HRun=0;HaplotypeScore=85.3663;InbreedingCoeff=0.5329;MQ=60.99;MQ0=1;MQRankSum=-2.175;QD=21.11;ReadPosRankSum=0.572;VQSLOD=2.0900;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:5,0:14:20.55:217,0,21	1/1:1,0:1:2.98:22,3,0	./.	0/0:4,0:4:2.99:0,3,23	1/1:6,7:13:20.80:309,21,0	0/0:3,0:9:12.04:0,12,389	0/0:4,0:6:9.02:0,9,222	1/1:16,11:26:3.24:446,3,0	1/1:5,0:5:5.69:30,6,0	0/0:7,0:7:9.02:0,9,290	0/0:13,0:13:12.02:0,12,269	0/0:2,0:5:9.03:0,9,231	0/0:1,0:3:6.02:0,6,195	0/0:5,0:5:3:0,3,27	0/0:7,0:7:21.07:0,21,1101	1/1:2,6:9:9.03:293,9,0	1/1:9,10:19:6.02:156,6,0	1/1:3,7:10:3.01:105,3,0	1/1:8,7:15:20.42:471,20,0	1/1:1,3:4:6.02:180,6,0	1/1:5,0:5:9:116,9,0	1/1:2,0:2:5.92:41,6,0	./.	0/0:0,0:1:3.01:0,3,97	0/0:2,0:4:3.01:0,3,97	0/1:3,0:11:13.82:398,0,14	1/1:5,0:15:17.94:502,18,0	1/1:14,0:22:14.54:344,15,0
chr10	21938612	.	G	GA	3713.20	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=-10.935;DP=512;FS=1.317;HRun=7;HaplotypeScore=44.8734;InbreedingCoeff=0.8841;MQ=65.19;MQ0=0;MQRankSum=2.158;QD=29.71;ReadPosRankSum=0.677;VQSLOD=3.9259;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,16:19:45.14:544,45,0	0/0:11,0:11:27.04:0,27,261	0/0:4,0:3:2.04:0,2,6	0/1:4,0:4:2.37:2,0,22	1/1:4,29:32:87.27:1049,87,0	0/0:24,0:24:69.09:0,69,661	0/0:17,0:17:51.08:0,51,492	0/0:29,0:29:66.07:0,66,624	0/0:16,0:16:47.86:0,48,442	0/0:24,0:24:63.09:0,63,603	0/0:20,0:20:54.09:0,54,521	0/0:27,0:27:81.13:0,81,782	0/0:28,0:28:72.09:0,72,689	0/0:19,0:19:51.06:0,51,482	0/0:23,0:23:60.06:0,60,568	0/0:23,0:23:66.10:0,66,634	0/0:18,0:18:48.07:0,48,463	0/0:20,0:20:57.09:0,57,550	0/0:14,0:14:39.06:0,39,376	0/0:22,0:22:60.06:0,60,568	0/0:3,0:3:5.99:0,6,52	1/1:1,14:15:39.12:471,39,0	0/0:20,0:20:54.07:0,54,516	0/0:6,0:6:18.03:0,18,174	0/0:19,0:19:45.05:0,45,429	1/1:3,18:21:28.26:612,28,0	1/1:2,23:24:63.15:745,63,0	1/1:0,8:8:24.07:290,24,0
chr10	21940416	.	AGG	A	10604.48	PASS	AB=1.000;AC=33;AF=0.589;AN=56;BaseQRankSum=-6.466;DP=676;FS=0.405;HRun=10;HaplotypeScore=93.5754;InbreedingCoeff=0.8793;MQ=77.12;MQ0=5;MQRankSum=0.905;QD=23.05;ReadPosRankSum=8.022;VQSLOD=3.8343;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,32:35:78.14:853,78,0	0/0:4,0:10:12:0,12,105	0/0:33,1:24:0.71:0,1,310	0/0:36,0:25:17.50:0,18,387	1/1:3,31:34:72.15:801,72,0	1/1:8,24:32:51.12:567,51,0	1/1:4,27:31:63.16:701,63,0	0/0:12,0:15:23.88:0,24,189	0/0:5,0:14:15.02:0,15,140	1/1:8,25:33:69.11:761,69,0	1/1:4,20:24:57.14:630,57,0	1/1:6,21:28:54.05:659,54,0	1/1:1,31:32:84.22:936,84,0	1/1:3,21:24:48.13:535,48,0	0/0:32,0:32:78.58:0,79,1033	0/0:4,0:20:36.05:0,36,358	0/0:9,0:20:27.05:0,27,297	0/1:7,0:19:9.90:10,0,140	0/0:11,0:16:35.54:0,36,292	0/0:2,0:6:8.46:0,8,65	0/0:9,0:11:17.92:0,18,155	1/1:1,15:16:42.11:467,42,0	1/1:4,21:25:44.97:500,45,0	1/1:2,19:21:48.12:535,48,0	1/1:3,27:30:63.16:702,63,0	1/1:7,28:35:64.26:835,64,0	1/1:4,23:27:66.17:732,66,0	1/1:5,9:14:36.05:379,36,0
chr10	21940425	.	GGA	G	2546.27	PASS	AB=0.982;AC=28;AF=0.500;AN=56;BaseQRankSum=8.940;DP=648;FS=3.104;HRun=0;HaplotypeScore=116.1045;InbreedingCoeff=0.5235;MQ=72.41;MQ0=5;MQRankSum=2.334;QD=5.68;ReadPosRankSum=11.669;VQSLOD=1.3790;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:34,0:34:21.83:225,22,0	0/0:11,0:11:20.78:0,21,201	0/0:39,0:25:6.82:0,7,458	0/1:35,0:20:3.78:4,0,396	0/1:33,0:33:30.99:147,0,31	1/1:25,2:27:21.26:192,21,0	1/1:29,0:29:7.08:158,7,0	0/0:21,0:21:42.05:0,42,500	0/0:13,0:13:20.67:0,21,178	0/1:29,1:30:50.89:146,0,51	1/1:22,1:23:3.59:168,4,0	0/1:24,1:25:12.50:150,0,13	1/1:31,0:31:71.64:332,72,0	1/1:22,0:22:18:158,18,0	0/0:29,0:29:80.79:0,81,836	0/0:19,0:19:41.64:0,42,394	0/0:17,0:17:29.85:0,30,296	0/0:16,0:16:9.98:0,10,149	0/0:16,0:15:12.56:0,13,265	0/0:9,0:9:20.41:0,20,187	0/0:10,0:10:10.63:0,11,189	1/1:15,0:15:33.56:133,34,0	0/1:23,1:24:7.60:104,0,8	1/1:20,0:20:5.90:128,6,0	1/1:28,0:28:27.87:187,28,0	1/1:29,0:29:27.15:163,27,0	1/1:26,0:25:14.04:243,14,0	0/1:17,0:17:59.43:111,0,59
chr10	21940646	.	GT	G	3778.72	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=-5.112;DP=587;FS=0.732;HRun=10;HaplotypeScore=98.0298;InbreedingCoeff=0.9429;MQ=73.26;MQ0=0;MQRankSum=1.634;QD=18.25;ReadPosRankSum=-0.243;VQSLOD=3.5896;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:78.14:0,78,832	1/1:1,7:8:21:182,21,0	0/0:26,0:20:13.22:0,13,306	0/0:22,0:16:36.72:0,37,357	0/0:17,0:17:42.11:0,42,464	0/0:24,0:24:57.05:0,57,323	0/0:14,0:14:37.23:0,37,191	1/1:6,31:36:83.94:729,84,0	1/1:3,21:24:59.98:521,60,0	0/0:27,0:27:38.37:0,38,249	0/0:19,0:19:48.74:0,49,255	0/0:23,0:23:60.49:0,60,304	0/0:13,0:13:15.14:0,15,181	0/0:19,0:19:50.64:0,51,264	0/0:21,0:21:51.05:0,51,548	1/1:2,20:22:53.99:469,54,0	1/1:4,13:17:41.99:364,42,0	1/1:5,15:18:44.99:390,45,0	1/1:14,16:30:31.65:393,32,0	1/1:4,23:27:62.82:546,63,0	1/1:0,7:7:21:182,21,0	0/0:14,0:15:38.93:0,39,404	0/0:13,0:13:34.57:0,35,184	0/1:15,0:15:2.08:2,0,118	0/0:29,0:29:72.88:0,73,370	0/0:31,0:31:74.99:0,75,806	0/0:21,0:21:57.12:0,57,609	0/0:14,0:14:42.11:0,42,464
chr10	21941196	.	T	TA	4204.88	PASS	AB=1.000;AC=20;AF=0.357;AN=56;BaseQRankSum=-12.900;DP=446;FS=4.231;HRun=6;HaplotypeScore=41.6502;InbreedingCoeff=0.8459;MQ=62.57;MQ0=0;MQRankSum=0.663;QD=30.47;ReadPosRankSum=-3.033;VQSLOD=2.8618;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:69.12:0,69,693	1/1:0,2:2:3.01:38,3,0	0/1:2,0:2:3.04:3,0,25	0/1:3,0:3:7.67:8,0,23	0/0:20,0:20:54.11:0,54,545	0/0:17,0:17:42.08:0,42,422	0/0:10,0:10:30.07:0,30,306	1/1:4,27:31:81.23:990,81,0	1/1:1,9:10:21.07:260,21,0	0/0:19,0:19:57.13:0,57,581	0/0:24,0:24:72.16:0,72,734	0/0:6,0:6:15.03:0,15,153	0/0:8,0:8:21.04:0,21,214	0/0:20,0:20:51.12:0,51,520	0/0:12,0:12:33.07:0,33,336	1/1:1,20:21:57.18:717,57,0	1/1:0,10:10:27.09:340,27,0	1/1:2,10:12:21.07:264,21,0	1/1:1,16:17:45.14:566,45,0	1/1:1,20:21:60.19:755,60,0	1/1:1,8:9:21.07:264,21,0	0/0:5,0:5:15.03:0,15,153	0/0:22,0:22:66.15:0,66,673	0/0:10,0:10:30.07:0,30,306	0/0:31,0:31:84.16:0,84,844	0/0:32,0:32:84.19:0,84,857	0/0:31,0:31:90.18:0,90,909	0/0:16,0:16:45.10:0,45,456
chr10	21941321	.	A	AGC	572.16	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=7.068;DP=426;FS=2.367;HRun=0;HaplotypeScore=104.4496;InbreedingCoeff=0.7937;MQ=77.27;MQ0=3;MQRankSum=-1.503;QD=6.29;ReadPosRankSum=-0.453;VQSLOD=3.3159;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:21,4:24:11.91:88,12,0	0/0:5,0:5:15.05:0,15,213	0/0:20,0:16:45.12:0,45,611	0/0:31,0:27:49.31:0,49,843	1/1:13,0:13:14.23:101,14,0	0/0:24,0:23:51.14:0,51,707	0/0:11,0:11:30.10:0,30,423	0/0:28,0:28:75.24:0,75,1040	0/0:16,0:16:19.17:0,19,538	0/0:17,0:17:45.14:0,45,628	0/0:7,0:7:9.03:0,9,129	0/0:10,0:10:30.09:0,30,411	0/0:11,0:11:21.34:0,21,255	0/0:18,0:18:45.15:0,45,641	0/0:15,0:15:29.82:0,30,372	0/0:23,0:23:60.20:0,60,865	0/0:14,0:14:39.13:0,39,554	0/0:8,0:8:24.05:0,24,318	0/0:13,0:13:34.20:0,34,464	0/0:8,0:8:21.07:0,21,301	0/0:29,0:29:57.15:0,57,815	1/1:8,0:8:2.89:25,3,0	0/0:5,0:5:12.02:0,12,152	0/0:14,0:14:27.07:0,27,364	0/0:8,0:7:15.04:0,15,198	0/1:21,0:21:12.94:240,0,13	1/1:13,1:13:8.65:142,9,0	1/1:10,0:10:17.85:139,18,0
chr10	21941366	.	ATGTGTGTGTGTGTATGTGTGTGTG	A	498.04	PASS	AB=0.986;AC=15;AF=0.326;AN=46;BaseQRankSum=-0.599;DP=436;FS=3.176;HRun=0;HaplotypeScore=215.1179;InbreedingCoeff=-0.0005;MQ=40.66;MQ0=43;MQRankSum=0.415;QD=2.80;ReadPosRankSum=-2.893;VQSLOD=2.4980;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:26:0.91:0,1,2	./.	./.	./.	./.	0/1:18,0:16:5.94:6,0,380	0/0:22,0:17:12.85:0,13,101	0/0:31,0:29:33.27:0,33,352	0/0:14,0:13:14.17:0,14,274	0/1:18,0:15:8.31:8,0,547	./.	0/1:13,0:12:18.14:18,0,170	0/0:14,0:13:9.29:0,9,288	0/1:18,0:17:32.70:33,0,404	0/1:24,0:22:89.44:199,0,89	0/0:24,0:24:26.44:0,26,452	0/1:16,0:14:17.61:18,0,40	0/0:11,0:7:19.83:0,20,261	0/0:19,0:16:2.17:0,2,716	0/0:7,0:5:6.40:0,6,45	0/0:47,0:40:15.30:0,15,307	1/1:7,0:6:0.89:2,1,0	0/1:7,0:7:8.15:13,0,8	0/0:15,0:12:5.33:0,5,46	0/1:14,0:13:6.92:7,0,279	0/1:18,0:19:99:187,0,259	1/1:16,0:14:13.26:94,13,0	1/1:6,0:6:5.99:51,6,0
chr10	21941380	.	ATGTG	A	597.01	PASS	AB=0.853;AC=15;AF=0.300;AN=50;BaseQRankSum=-3.401;DP=445;FS=6.332;HRun=0;HaplotypeScore=118.0047;InbreedingCoeff=0.1496;MQ=42.88;MQ0=48;MQRankSum=1.290;QD=3.06;ReadPosRankSum=-0.143;VQSLOD=1.9053;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:26:2.46:0,2,23	1/1:3,0:2:3.01:46,3,0	./.	./.	./.	0/0:17,0:15:8.51:0,9,91	0/0:24,0:20:24.08:0,24,393	0/1:20,0:18:9.39:65,0,9	0/1:9,8:16:12.73:42,0,13	0/0:17,0:15:23.70:0,24,308	0/0:8,0:7:5.05:0,5,74	0/0:13,0:12:12.02:0,12,151	0/0:17,0:15:23.20:0,23,202	0/0:24,0:23:35.32:0,35,386	0/0:25,0:23:1.09:0,1,7	1/1:14,9:24:8.37:124,8,0	0/1:7,11:16:12.50:25,0,12	1/1:14,0:9:0.53:104,1,0	0/1:20,0:17:57.39:119,0,57	1/1:3,5:7:2.73:21,3,0	0/1:30,20:43:24.96:156,0,25	0/1:3,0:2:0:0,0,0	0/0:7,0:5:7.73:0,8,56	0/1:16,0:13:33.59:34,0,59	0/0:14,0:13:10.07:0,10,101	0/0:18,0:16:9.75:0,10,66	0/0:15,0:13:4.71:0,5,28	0/0:4,0:3:0.47:0,0,1
chr10	21941657	.	CAT	C	1716.73	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=8.577;DP=304;FS=0.595;HRun=0;HaplotypeScore=42.6864;InbreedingCoeff=0.7886;MQ=91.76;MQ0=0;MQRankSum=-0.168;QD=17.34;ReadPosRankSum=1.778;VQSLOD=3.3821;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,11:15:27.09:355,27,0	0/0:2,0:2:6.02:0,6,103	0/0:10,0:6:6.86:0,7,60	0/1:28,0:24:0.29:0,0,152	1/1:3,11:14:33.02:394,33,0	0/0:14,0:14:36.12:0,36,617	0/0:7,0:7:15.05:0,15,257	0/0:45,0:45:99:0,108,1802	0/0:3,0:3:6.02:0,6,103	0/0:17,0:17:42.10:0,42,689	0/0:5,0:5:9.03:0,9,154	0/0:4,0:4:12.04:0,12,206	0/0:6,0:6:15.05:0,15,257	0/0:7,0:7:20.99:0,21,297	0/0:8,0:8:18.06:0,18,309	0/0:9,0:9:21.07:0,21,360	0/0:19,0:19:48.16:0,48,815	0/0:9,0:9:24.08:0,24,409	0/0:9,0:9:21.07:0,21,360	0/0:6,0:6:9.03:0,9,154	0/0:5,0:5:15.05:0,15,257	1/1:1,1:2:3.01:39,3,0	0/0:6,0:6:9.03:0,9,154	0/0:2,0:2:6.02:0,6,103	0/0:12,0:12:24.08:0,24,411	1/1:2,11:13:33.11:433,33,0	1/1:5,10:15:21.07:276,21,0	1/1:0,11:11:30.10:394,30,0
chr10	21941984	.	T	TAC	4923.81	PASS	AB=0.771;AC=50;AF=0.893;AN=56;BaseQRankSum=2.929;DP=852;FS=6.561;HRun=0;HaplotypeScore=208.7739;InbreedingCoeff=0.6271;MQ=50.60;MQ0=21;MQRankSum=-1.458;QD=6.63;ReadPosRankSum=1.039;VQSLOD=3.9171;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:26:0.15:3,0,0	1/1:7,0:10:8.92:69,9,0	0/0:59,1:35:18.05:0,18,204	0/0:49,0:29:20.49:0,20,213	1/1:13,0:24:12.09:83,12,0	1/1:20,0:43:34.86:248,35,0	1/1:35,0:34:21.82:170,22,0	1/1:24,1:36:37.65:279,38,0	1/1:11,1:25:28.96:227,29,0	1/1:26,1:34:34.66:246,35,0	1/1:15,1:23:6.33:29,6,0	1/1:20,0:33:29.48:232,29,0	1/1:22,1:34:27.17:188,27,0	1/1:21,0:24:19.51:144,20,0	0/1:10,26:37:14.21:684,0,14	1/1:13,1:38:41.25:331,41,0	1/1:8,0:17:15.48:119,15,0	1/1:17,0:25:20.99:183,21,0	1/1:13,1:21:20.66:183,21,0	1/1:10,0:18:11.89:94,12,0	1/1:18,2:37:16.50:98,17,0	1/1:13,0:21:10.69:55,11,0	1/1:11,0:19:8.35:41,8,0	1/1:28,1:42:18.28:102,18,0	1/1:13,1:25:18.97:103,19,0	1/1:21,0:37:48.02:484,48,0	1/1:15,2:34:38.87:349,39,0	1/1:4,1:9:18.01:179,18,0
chr10	21942870	.	GA	G	4911.08	PASS	AB=0.941;AC=21;AF=0.375;AN=56;BaseQRankSum=10.926;DP=671;FS=1.837;HRun=10;HaplotypeScore=70.5569;InbreedingCoeff=0.9255;MQ=74.40;MQ0=0;MQRankSum=0.439;QD=19.18;ReadPosRankSum=1.403;VQSLOD=5.8207;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:84.67:0,85,907	1/1:0,9:9:21:182,21,0	0/1:15,1:15:13.43:13,0,148	0/0:19,0:19:22.11:0,22,236	0/0:39,0:39:96.71:0,97,1047	0/0:12,0:12:28.61:0,29,293	0/0:19,0:19:57.13:0,57,621	1/1:10,30:40:88.97:757,89,0	1/1:3,18:21:47.98:417,48,0	0/0:29,0:31:86.66:0,87,879	0/0:16,0:18:47.91:0,48,491	0/0:24,1:25:36.99:0,37,614	0/0:19,0:19:48.13:0,48,530	0/0:25,0:25:60:0,60,645	1/1:2,28:30:77.98:677,78,0	1/1:0,23:23:56.99:495,57,0	1/1:6,17:23:47.97:417,48,0	1/1:4,12:16:32.99:286,33,0	1/1:6,22:28:65.98:572,66,0	1/1:5,25:30:71.97:625,72,0	1/1:1,19:20:53.99:469,54,0	0/0:16,0:17:47.95:0,48,505	0/0:22,0:24:65.84:0,66,685	0/0:20,0:20:42.09:0,42,448	0/0:38,0:38:99:0,102,1121	0/0:22,0:22:51.13:0,51,557	0/0:38,0:41:99:0,111,1182	0/0:8,0:8:24.06:0,24,263
chr10	21944241	.	T	TGTTTCGGTTC	15777.85	PASS	AB=0.563;AC=11;AF=0.196;AN=56;BaseQRankSum=-8.323;DP=787;FS=1.662;HRun=0;HaplotypeScore=236.3107;InbreedingCoeff=0.8838;MQ=80.36;MQ0=0;MQRankSum=-14.139;QD=93.36;ReadPosRankSum=-0.671;VQSLOD=4.8433;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,22:50:68.79:3599,69,0	0/0:9,0:9:27.09:0,27,891	0/0:22,0:22:57.15:0,57,1621	0/0:23,0:23:63.13:0,63,1750	1/1:7,16:27:60.12:2398,60,0	0/0:27,0:27:58.85:0,59,2380	0/0:42,0:42:99:0,120,3668	0/0:26,0:26:69.21:0,69,1998	0/0:22,0:22:63.22:0,63,2043	0/0:24,0:24:69.23:0,69,2181	0/0:20,0:20:60.11:0,60,1661	0/0:30,0:30:81.75:0,82,2492	0/0:36,0:36:99:0,102,3133	0/0:45,0:45:99:0,120,3750	0/0:0,0:42:99:0,105,1494	0/0:30,0:30:90.31:0,90,2839	0/0:29,0:29:78.25:0,78,2465	0/0:38,0:38:99:0,108,3321	0/0:19,0:19:54.19:0,54,1779	0/0:29,0:29:81.27:0,81,2460	0/0:30,0:30:87.25:0,87,2536	1/1:6,12:25:59.91:2433,60,0	0/0:19,0:19:48.15:0,48,1527	0/0:33,0:33:90.24:0,90,2456	0/0:23,0:23:59.05:0,59,1704	0/1:6,16:27:21.82:3351,0,22	1/1:3,19:30:62.84:3199,63,0	1/1:3,4:10:15.05:798,15,0
chr10	21944301	.	ACCG	A	13522.38	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=13.865;DP=761;FS=2.002;HRun=0;HaplotypeScore=126.7222;InbreedingCoeff=0.9996;MQ=81.88;MQ0=0;MQRankSum=-4.798;QD=48.47;ReadPosRankSum=5.456;VQSLOD=7.0844;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,105,2541	0/0:12,0:12:36.12:0,36,855	0/0:28,0:28:84.27:0,84,1841	0/0:28,0:28:66.41:0,66,1655	0/0:18,0:18:36.10:0,36,835	1/1:0,32:32:90.31:1665,90,0	1/1:0,28:28:75.26:1396,75,0	0/0:32,0:32:96.32:0,96,2232	0/0:22,0:22:66.21:0,66,1575	1/1:0,23:23:69.24:1278,69,0	1/1:0,22:22:60.21:1118,60,0	1/1:0,31:31:87.30:1603,87,0	1/1:1,31:32:84.29:1561,84,0	1/1:0,37:37:93.32:1732,93,0	0/0:31,0:31:78.27:0,78,1880	0/0:32,0:32:96.32:0,96,2237	0/0:34,0:34:99:0,102,2490	0/0:25,0:25:72.25:0,72,1755	0/0:25,0:25:75.25:0,75,1723	0/0:26,0:26:75.26:0,75,1793	0/0:34,0:34:99:0,99,2438	0/0:15,0:15:42.06:0,42,954	1/1:0,21:21:47.81:884,48,0	1/1:0,31:31:72.25:1337,72,0	1/1:0,22:22:51.17:950,51,0	0/0:25,0:25:72.25:0,72,1771	0/0:34,0:34:69.11:0,69,1620	0/0:8,0:8:24:0,24,514
chr10	21944533	.	A	AT	462.16	PASS	AB=0.937;AC=5;AF=0.089;AN=56;BaseQRankSum=-4.183;DP=566;FS=0.677;HRun=13;HaplotypeScore=74.9894;InbreedingCoeff=0.3666;MQ=67.25;MQ0=0;MQRankSum=0.503;QD=6.42;ReadPosRankSum=-0.132;VQSLOD=2.4076;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:57.27:0,57,393	0/0:8,0:8:14.84:0,15,103	0/0:11,0:11:8.82:0,9,59	0/1:7,0:7:7.74:8,0,35	0/0:16,1:19:31.36:0,31,211	0/0:16,0:16:26.72:0,27,185	0/0:17,0:17:32.60:0,33,223	0/0:26,0:27:27.48:0,27,307	0/0:16,1:20:10.92:0,11,194	0/0:23,0:23:46.85:0,47,326	0/0:19,0:20:43.60:0,44,294	0/0:18,1:21:20.82:0,21,272	0/0:18,0:18:41.59:0,42,286	0/0:20,0:21:31.52:0,32,211	1/1:6,23:29:24.90:513,25,0	0/0:21,1:24:26.71:0,27,313	0/0:19,0:20:40.58:0,41,270	0/0:21,0:20:41.41:0,41,284	0/0:23,0:25:60.58:0,61,402	0/1:21,3:25:51.92:52,0,255	0/0:16,0:18:48.70:0,49,320	0/1:9,1:11:2.03:2,0,122	0/0:16,0:18:36.71:0,37,238	0/0:28,1:29:28.55:0,29,342	0/0:20,1:21:19.65:0,20,280	0/0:19,0:19:35.62:0,36,245	0/0:24,0:26:51.52:0,52,338	0/0:17,2:20:15.76:0,16,238
chr10	21944666	.	TAAA	T	1743.35	PASS	AB=0.850;AC=11;AF=0.196;AN=56;BaseQRankSum=11.707;DP=487;FS=10.198;HRun=12;HaplotypeScore=103.6988;InbreedingCoeff=0.7745;MQ=78.83;MQ0=2;MQRankSum=-3.215;QD=14.41;ReadPosRankSum=2.019;VQSLOD=1.3152;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:14,0:17:44.04:80,0,44	0/0:10,0:10:30.10:0,30,582	0/0:21,0:18:1.01:0,1,185	0/0:19,0:14:7.98:0,8,152	1/1:12,16:28:68.83:701,69,0	0/0:25,0:26:70.48:0,70,1335	0/0:8,0:8:21.07:0,21,403	0/0:24,0:26:61.73:0,62,1103	0/0:11,0:11:24.08:0,24,454	0/0:15,0:16:39.11:0,39,723	0/0:18,0:18:41.98:0,42,681	0/0:10,0:11:27.07:0,27,496	0/0:17,0:17:30.10:0,30,591	0/0:17,0:17:44.98:0,45,803	0/0:18,0:17:42.13:0,42,534	0/0:12,0:12:33.11:0,33,651	0/0:11,0:12:31.35:0,31,574	0/0:15,0:17:45.11:0,45,765	0/0:18,0:19:51.12:0,51,842	0/0:24,0:25:57.17:0,57,1074	0/0:10,0:10:26.77:0,27,443	1/1:4,15:19:44.97:474,45,0	0/0:16,0:18:48.14:0,48,830	0/0:18,0:18:39.13:0,39,763	0/0:14,0:15:42.12:0,42,792	1/1:24,0:26:1.59:264,2,0	1/1:20,0:23:42.43:279,42,0	1/1:7,0:7:20.22:113,20,0
chr10	21944673	.	A	AAC	620.53	PASS	AB=0.947;AC=3;AF=0.054;AN=56;BaseQRankSum=-2.511;DP=488;FS=3.973;HRun=0;HaplotypeScore=103.1167;InbreedingCoeff=0.5049;MQ=68.52;MQ0=3;MQRankSum=0.453;QD=16.33;ReadPosRankSum=0.645;VQSLOD=3.7038;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:17,0:18:29.35:29,0,83	0/0:12,0:12:36.09:0,36,483	0/0:26,0:15:24.69:0,25,274	0/0:23,0:12:15.35:0,15,139	0/0:31,0:31:81.33:0,81,716	0/0:25,0:25:75.18:0,75,1023	0/0:9,0:9:24.06:0,24,311	0/0:25,0:25:64.71:0,65,837	0/0:9,0:9:26.97:0,27,325	0/0:18,0:18:54.13:0,54,669	0/0:15,0:15:45.01:0,45,538	0/0:11,0:11:30.06:0,30,367	0/0:10,0:10:30.08:0,30,385	0/0:17,0:17:47.91:0,48,588	1/1:0,20:19:41.98:697,42,0	0/0:12,0:12:33.10:0,33,460	0/0:13,0:13:39.04:0,39,483	0/0:19,0:19:53.62:0,54,609	0/0:23,0:21:55.01:0,55,669	0/0:20,0:20:60.16:0,60,800	0/0:10,0:10:26.78:0,27,336	0/0:18,0:18:50.03:0,50,426	0/0:18,0:18:51.03:0,51,619	0/0:13,0:13:39.13:0,39,564	0/0:14,0:14:42.13:0,42,590	0/0:26,0:26:3.15:0,3,225	0/0:26,0:25:3.99:0,4,150	0/0:7,0:7:11.54:0,12,54
chr10	21944686	.	CA	C	1335.14	PASS	AB=0.777;AC=7;AF=0.125;AN=56;BaseQRankSum=13.087;DP=529;FS=15.124;HRun=6;HaplotypeScore=97.4566;InbreedingCoeff=0.2124;MQ=66.71;MQ0=8;MQRankSum=-5.175;QD=10.19;ReadPosRankSum=3.551;VQSLOD=0.8188;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:13,6:19:74.26:155,0,74	0/0:12,0:12:36.12:0,36,517	0/0:35,0:18:1.08:0,1,214	0/0:28,0:11:1.29:0,1,75	0/1:30,1:31:99:211,0,203	0/0:26,0:26:78.25:0,78,1102	0/0:10,0:10:27.08:0,27,370	0/0:24,0:24:63.18:0,63,878	0/0:11,0:11:30.08:0,30,411	0/0:18,0:18:54.18:0,54,774	0/0:16,0:16:45.14:0,45,626	0/0:13,0:13:39.13:0,39,558	0/0:13,0:13:39.13:0,39,560	0/0:14,0:14:39.13:0,39,556	0/0:21,0:20:48.16:0,48,689	0/0:13,0:13:39.13:0,39,552	0/0:14,0:14:42.13:0,42,578	0/0:24,0:24:66.22:0,66,932	0/0:27,0:24:69.20:0,69,939	0/0:23,0:23:69.23:0,69,989	0/0:9,0:9:21.07:0,21,301	0/1:19,1:20:80.72:120,0,81	0/0:17,0:17:51.16:0,51,714	0/0:15,0:15:42.14:0,42,598	0/0:15,0:15:39.13:0,39,556	0/1:8,19:27:99:342,0,126	0/1:10,16:26:2.49:467,0,2	1/1:0,8:8:19.57:174,20,0
chr10	21944697	.	A	AAC	3490.28	PASS	AB=0.976;AC=12;AF=0.214;AN=56;BaseQRankSum=13.322;DP=535;FS=3.661;HRun=0;HaplotypeScore=100.0436;InbreedingCoeff=0.6114;MQ=66.15;MQ0=9;MQRankSum=-3.773;QD=17.63;ReadPosRankSum=2.930;VQSLOD=3.9320;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:17,2:19:88.72:329,0,89	0/0:12,0:12:36.12:0,36,540	0/1:42,0:19:11.43:11,0,294	0/1:32,0:14:1.94:2,0,51	1/1:29,0:30:44.90:763,45,0	0/0:26,0:26:72.22:0,72,1051	0/0:12,0:12:36.11:0,36,487	0/0:27,0:26:75.22:0,75,998	0/0:12,0:12:33.08:0,33,438	0/0:19,0:19:56.40:0,56,806	0/0:16,0:16:45.15:0,45,688	0/0:13,0:13:39.11:0,39,556	0/0:16,0:16:48.15:0,48,684	0/0:15,0:15:45.15:0,45,657	0/0:20,0:19:45.14:0,45,659	0/0:11,0:11:33.11:0,33,494	0/0:14,0:14:42.11:0,42,578	0/0:25,0:24:60.72:0,61,934	0/0:26,0:23:66.21:0,66,960	0/0:24,0:24:72.23:0,72,1042	0/0:8,0:7:21.06:0,21,279	1/1:13,2:15:37.46:459,37,0	0/0:18,0:18:51.10:0,51,672	0/0:11,0:11:28.34:0,28,416	0/0:12,0:11:33.08:0,33,420	0/1:28,0:28:59.13:766,0,59	1/1:24,0:23:49.58:864,50,0	1/1:8,0:8:21.02:296,21,0
chr10	21944698	.	A	AC	1480.14	PASS	AB=0.826;AC=10;AF=0.179;AN=56;BaseQRankSum=14.054;DP=530;FS=3.688;HRun=0;HaplotypeScore=95.8608;InbreedingCoeff=0.5273;MQ=66.38;MQ0=9;MQRankSum=-5.881;QD=9.87;ReadPosRankSum=2.523;VQSLOD=3.9018;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:15,3:18:99:168,0,158	0/0:13,0:13:36.12:0,36,502	0/0:41,0:19:22.91:0,23,363	0/1:31,0:14:9.47:9,0,39	0/1:7,20:27:11.06:298,0,11	0/0:25,0:25:72.22:0,72,969	0/0:12,0:12:36.11:0,36,484	0/0:28,0:27:75.23:0,75,998	0/0:12,0:12:36.08:0,36,429	0/0:20,0:20:51.27:0,51,745	0/0:16,0:16:45.15:0,45,629	0/0:13,0:13:39.11:0,39,514	0/0:16,0:16:48.15:0,48,653	0/0:15,0:15:45.15:0,45,625	0/0:20,0:19:45.61:0,46,613	0/0:11,0:11:33.11:0,33,460	0/0:14,0:14:42.11:0,42,544	0/0:26,0:25:59.63:0,60,871	0/0:26,0:23:66.21:0,66,906	0/0:24,0:24:72.22:0,72,973	0/0:8,0:7:21.06:0,21,271	1/1:5,10:15:18.86:212,19,0	0/0:18,0:18:51.09:0,51,639	0/0:10,0:10:28.34:0,28,380	0/0:12,0:11:33.08:0,33,402	0/1:23,4:27:99:403,0,129	1/1:18,5:23:21.40:401,21,0	1/1:8,0:8:20.59:151,21,0
chr10	21944704	.	A	AAC	2954.75	PASS	AB=0.929;AC=12;AF=0.214;AN=56;BaseQRankSum=13.215;DP=525;FS=2.910;HRun=0;HaplotypeScore=94.8247;InbreedingCoeff=0.6125;MQ=67.98;MQ0=9;MQRankSum=-3.384;QD=15.47;ReadPosRankSum=1.389;VQSLOD=3.7805;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:14,3:17:39.79:309,0,40	0/0:14,0:14:39.12:0,39,552	0/1:42,0:21:0.46:0,0,364	0/1:28,0:13:32.18:32,0,58	1/1:8,20:28:53.84:705,54,0	0/0:22,0:22:66.14:0,66,901	0/0:13,0:13:36.10:0,36,504	0/0:28,0:27:78.09:0,78,985	0/0:10,0:10:30.07:0,30,390	0/0:22,0:22:58.91:0,59,842	0/0:15,0:15:45.15:0,45,657	0/0:14,0:14:42.08:0,42,538	0/0:15,0:15:45.15:0,45,656	0/0:17,0:17:51.11:0,51,683	0/0:20,0:19:45.14:0,45,637	0/0:11,0:11:33.11:0,33,481	0/0:14,0:14:42.02:0,42,542	0/0:27,0:26:49.32:0,49,911	0/0:27,0:25:75.21:0,75,1023	0/0:26,0:26:78.10:0,78,1028	0/0:6,0:6:18.06:0,18,252	1/1:4,10:14:35.92:396,36,0	0/0:13,0:13:39.13:0,39,567	0/0:10,0:10:29.77:0,30,404	0/0:9,0:8:24.07:0,24,331	0/1:22,4:26:27.59:717,0,28	1/1:18,3:23:56.12:739,56,0	1/1:10,0:10:23.66:228,24,0
chr10	21945027	.	C	CT	3106.09	PASS	AB=0.976;AC=22;AF=0.393;AN=56;BaseQRankSum=7.943;DP=435;FS=18.057;HRun=7;HaplotypeScore=58.8665;InbreedingCoeff=0.8338;MQ=73.48;MQ0=0;MQRankSum=1.171;QD=19.17;ReadPosRankSum=1.802;VQSLOD=2.1826;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:60.04:0,60,560	0/0:6,0:6:18.01:0,18,166	0/1:19,1:15:8.98:9,0,47	0/0:14,1:10:9.50:0,10,89	0/0:23,0:23:65.98:0,66,605	1/1:1,13:14:36.11:423,36,0	1/1:1,9:10:18.05:212,18,0	0/0:23,0:23:51.05:0,51,482	0/0:15,0:15:45.03:0,45,418	1/1:1,16:17:48.08:524,48,0	1/1:3,12:15:42.97:474,43,0	1/1:1,8:9:18.04:203,18,0	1/1:2,15:17:42.13:494,42,0	1/1:1,10:11:30.09:353,30,0	0/1:21,0:21:31.44:31,0,107	0/0:14,0:14:36.03:0,36,336	0/0:19,0:19:45.03:0,45,422	0/0:11,0:11:32.90:0,33,288	0/0:21,0:21:53.76:0,54,476	0/0:22,0:22:57.06:0,57,540	0/0:12,0:12:33.02:0,33,311	0/0:7,0:7:12:0,12,110	1/1:3,9:12:27.97:319,28,0	1/1:1,7:8:12.04:140,12,0	1/1:0,8:8:12.04:141,12,0	0/0:21,0:22:49.29:0,49,428	0/0:28,0:29:76.41:0,76,644	0/0:12,0:12:30.05:0,30,288
chr10	21945034	.	T	TA	775.38	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=10.103;DP=421;FS=17.288;HRun=10;HaplotypeScore=65.7828;InbreedingCoeff=0.7263;MQ=75.40;MQ0=0;MQRankSum=-0.326;QD=4.53;ReadPosRankSum=2.320;VQSLOD=0.2895;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:56.87:0,57,460	0/0:6,0:6:11.98:0,12,98	0/0:19,0:14:1.95:0,2,95	0/1:15,0:10:3.98:4,0,63	0/0:24,0:24:56.89:0,57,465	1/1:13,0:13:29.11:108,29,0	1/1:10,0:10:8.14:41,8,0	0/0:21,0:21:56.88:0,57,458	0/0:15,0:15:35.95:0,36,295	1/1:16,0:16:17.47:65,17,0	1/1:15,0:15:7.83:76,8,0	1/1:8,0:8:9.16:52,9,0	1/1:18,0:18:17.17:103,17,0	1/1:13,0:13:12.60:63,13,0	1/1:7,15:22:14.47:357,14,0	0/0:12,0:12:29.95:0,30,246	0/0:19,0:19:47.88:0,48,383	0/0:11,0:11:20.95:0,21,172	0/0:18,0:18:32.94:0,33,271	0/0:22,0:22:59.89:0,60,484	0/0:11,0:11:29.96:0,30,246	0/0:4,0:4:8.98:0,9,74	0/1:14,0:14:17.31:45,0,17	1/1:7,0:7:9.33:32,9,0	1/1:8,0:8:9.18:30,9,0	0/0:18,0:18:11.57:0,12,44	0/0:28,0:28:17.09:0,17,108	0/1:12,0:12:1.78:2,0,27
chr10	21945247	.	TA	T	734.32	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=9.212;DP=457;FS=0.984;HRun=12;HaplotypeScore=60.2977;InbreedingCoeff=0.8873;MQ=84.55;MQ0=3;MQRankSum=-0.062;QD=7.73;ReadPosRankSum=3.160;VQSLOD=2.2870;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,20:24:53.79:418,54,0	0/0:8,0:8:21.02:0,21,202	0/0:27,1:18:0.96:0,1,129	0/0:27,1:23:7.95:0,8,87	0/0:16,1:17:21.82:0,22,385	0/0:24,0:24:63.05:0,63,618	0/0:11,0:11:27.04:0,27,268	0/0:27,3:30:25.65:0,26,613	0/0:9,0:9:26.92:0,27,258	0/0:12,0:12:29.79:0,30,282	0/0:18,1:20:30.67:0,31,463	0/0:6,0:7:17.85:0,18,155	0/0:18,0:18:48.08:0,48,480	0/0:12,0:12:30.05:0,30,299	1/1:5,16:21:32.86:256,33,0	0/0:14,0:15:41.69:0,42,381	0/0:18,0:18:45.07:0,45,449	0/0:19,0:19:42.14:0,42,468	0/0:12,1:15:26.81:0,27,237	0/0:16,1:17:21.84:0,22,394	0/0:8,0:9:20.88:0,21,197	0/0:6,0:6:18.02:0,18,171	0/0:15,0:15:3.84:0,4,217	0/0:7,0:7:15.01:0,15,145	0/0:13,1:16:24.56:0,25,402	1/1:3,0:16:25.99:74,26,0	1/1:5,0:24:34.62:100,35,0	1/1:0,0:10:20.37:59,20,0
chr10	21946218	.	C	CG	2898.70	PASS	AB=0.636;AC=19;AF=0.339;AN=56;BaseQRankSum=16.598;DP=468;FS=18.404;HRun=0;HaplotypeScore=168.1388;InbreedingCoeff=-0.1930;MQ=78.18;MQ0=0;MQRankSum=-13.762;QD=10.66;ReadPosRankSum=5.444;VQSLOD=2.3243;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:11,13:24:99:182,0,129	0/0:6,0:6:18.06:0,18,252	0/0:13,0:13:39.07:0,39,503	0/0:17,0:17:39.13:0,39,536	0/1:10,11:21:1.02:203,0,1	0/1:11,12:23:99:261,0,111	0/1:10,8:18:80.94:133,0,81	0/0:26,0:26:78.25:0,78,1077	0/0:17,0:17:48.16:0,48,665	0/1:7,4:11:99:111,0,163	1/1:4,7:12:2.38:161,2,0	0/1:3,11:14:19.50:209,0,19	0/1:6,8:15:22.80:212,0,23	0/1:6,15:21:38.78:293,0,39	0/1:7,10:17:91.92:176,0,92	0/0:11,0:11:33.11:0,33,461	0/0:27,0:27:81.24:0,81,1089	0/0:21,0:21:54.18:0,54,755	0/0:16,0:16:48.16:0,48,670	0/0:15,0:15:45.14:0,45,610	0/0:27,0:27:75.25:0,75,1049	0/1:5,8:13:12.08:158,0,12	0/1:5,8:13:11.85:137,0,12	0/1:7,7:14:31.40:123,0,31	0/1:7,17:24:18.77:316,0,19	0/1:8,6:14:95.79:96,0,252	0/1:4,12:16:35.33:246,0,35	1/1:0,2:2:5.99:48,6,0
chr10	21946219	.	A	AACCGGGCCACCT	33923.68	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=14.335;DP=465;FS=24.701;HRun=0;HaplotypeScore=176.3680;InbreedingCoeff=0.9837;MQ=78.25;MQ0=0;MQRankSum=-15.595;QD=124.72;ReadPosRankSum=0.345;VQSLOD=3.4267;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,11:25:69.13:2864,69,0	0/0:6,0:6:18.06:0,18,660	0/0:12,0:13:33.01:0,33,915	0/0:17,0:17:42.06:0,42,1213	1/1:11,9:21:47.95:2070,48,0	1/1:11,12:23:63.09:2801,63,0	1/1:11,7:18:54.16:2140,54,0	0/0:26,0:26:78.25:0,78,2761	0/0:16,0:16:48.11:0,48,1492	1/1:8,3:11:33.10:1315,33,0	1/1:5,7:12:35.90:1519,36,0	1/1:3,11:14:42.08:2003,42,0	1/1:7,8:15:44.72:1791,45,0	1/1:6,13:21:63.13:2941,63,0	1/1:7,10:17:51.14:2157,51,0	0/0:11,0:11:33.11:0,33,1306	0/0:25,0:25:75.18:0,75,2563	0/0:21,0:21:57.16:0,57,1956	0/0:16,0:16:48.16:0,48,1631	0/0:15,0:15:45.10:0,45,1457	0/0:27,0:27:75.24:0,75,2798	1/1:5,8:13:33.11:1527,33,0	1/1:4,8:12:36.11:1669,36,0	1/1:8,6:14:42.13:1762,42,0	1/1:7,17:24:69.23:3473,69,0	1/1:8,6:14:42.12:1745,42,0	1/1:8,7:16:44.93:1815,45,0	1/1:0,2:2:6.02:333,6,0
chr10	21948971	.	ATACT	A	1961.51	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.650;DP=637;FS=4.928;HRun=0;HaplotypeScore=98.7702;InbreedingCoeff=0.9954;MQ=82.96;MQ0=0;MQRankSum=-1.866;QD=36.32;ReadPosRankSum=1.760;VQSLOD=3.5524;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:78.25:0,78,1903	0/0:10,0:10:30.10:0,30,769	0/0:27,0:27:66.22:0,66,1507	0/0:16,0:16:42.14:0,42,977	1/1:4,29:33:78.18:1305,78,0	0/0:25,0:25:69.20:0,69,1641	0/0:15,0:15:36.11:0,36,850	0/0:36,0:36:81.28:0,81,2010	0/0:26,0:26:75.22:0,75,1818	0/0:26,0:26:75.26:0,75,1873	0/0:21,0:21:57.20:0,57,1437	0/0:29,0:29:81.28:0,81,2025	0/0:35,0:35:93.32:0,93,2354	0/0:20,0:20:60.21:0,60,1539	0/0:19,0:19:54.19:0,54,1377	0/0:23,0:23:66.23:0,66,1668	0/0:17,0:17:48.16:0,48,1183	0/0:15,0:15:42.14:0,42,1063	0/0:15,0:15:36.12:0,36,924	0/0:37,0:37:99:0,105,2498	0/0:16,0:16:48.15:0,48,1178	1/1:6,15:21:45.15:778,45,0	0/0:27,0:27:75.23:0,75,1853	0/0:6,0:6:18.06:0,18,462	0/0:22,0:22:63.20:0,63,1565	0/0:25,0:25:69.24:0,69,1754	0/0:36,0:36:99:0,102,2529	0/0:12,0:12:36.12:0,36,860
chr10	21949483	.	AT	A	1870.09	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=12.443;DP=631;FS=7.172;HRun=6;HaplotypeScore=67.5961;InbreedingCoeff=0.9976;MQ=81.55;MQ0=0;MQRankSum=-3.178;QD=22.81;ReadPosRankSum=2.535;VQSLOD=3.1079;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:63.18:0,63,809	0/0:12,0:12:36.11:0,36,460	0/0:24,0:24:37.45:0,37,502	0/0:19,1:19:43.56:0,44,504	0/0:32,0:32:87.27:0,87,1131	0/0:35,0:35:96.30:0,96,1248	0/0:18,0:18:51.16:0,51,658	0/0:35,0:35:87.25:0,87,1094	0/0:22,0:22:66.19:0,66,837	0/0:26,0:26:66.21:0,66,866	0/0:23,0:23:63.19:0,63,812	0/0:20,0:20:57.19:0,57,750	0/0:30,0:30:87.26:0,87,1112	0/0:18,0:18:51.12:0,51,638	1/1:2,25:27:63.14:646,63,0	0/0:17,0:17:48.15:0,48,618	0/0:13,0:13:36.10:0,36,459	0/0:12,0:12:33.11:0,33,431	0/0:17,0:17:48.13:0,48,600	0/0:31,0:31:81.25:0,81,1041	0/0:16,0:16:48.14:0,48,615	0/0:23,0:23:63.20:0,63,816	0/0:29,0:29:78.25:0,78,1023	0/0:18,0:18:48.16:0,48,632	0/0:34,0:34:99:0,99,1286	1/1:1,18:19:51.11:523,51,0	1/1:6,23:29:66.15:677,66,0	1/1:0,7:7:18.04:185,18,0
chr10	21950050	.	AAC	A	2592.26	PASS	AB=1.000;AC=30;AF=0.536;AN=56;BaseQRankSum=9.629;DP=575;FS=2.023;HRun=0;HaplotypeScore=109.9837;InbreedingCoeff=0.2374;MQ=69.78;MQ0=7;MQRankSum=-1.791;QD=6.72;ReadPosRankSum=3.934;VQSLOD=2.8993;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:25:25.12:132,0,25	0/1:4,0:4:13.20:18,0,13	0/0:40,0:15:0.75:0,1,140	0/0:36,0:14:21.88:0,22,173	0/0:22,0:22:57.02:0,57,803	1/1:29,1:29:68.50:298,68,0	1/1:7,0:7:16.42:58,16,0	1/1:33,0:33:15.63:156,16,0	1/1:13,0:13:5.66:90,6,0	1/1:32,0:30:2.34:144,2,0	1/1:20,1:21:51.53:240,52,0	0/1:21,0:22:42.90:132,0,43	1/1:16,1:17:22.28:223,22,0	0/1:16,0:16:74.48:83,0,74	0/0:17,0:17:31.25:0,31,106	0/1:23,0:23:39.42:154,0,39	0/1:14,0:14:35.13:79,0,35	1/1:23,1:23:28.85:201,29,0	0/1:26,0:24:20.45:194,0,20	1/1:20,0:20:24.82:179,25,0	0/1:11,0:11:19.25:54,0,19	0/0:11,0:11:30.10:0,30,456	0/1:18,0:17:9.80:111,0,10	0/1:9,0:9:3.15:51,0,3	1/1:21,0:21:27.70:187,28,0	0/0:22,0:22:61.47:0,61,889	0/0:32,0:32:95.91:0,96,1370	0/0:9,0:9:27.09:0,27,420
chr10	21950052	.	CAA	C	10522.29	PASS	AB=0.533;AC=41;AF=0.732;AN=56;BaseQRankSum=3.296;DP=576;FS=2.896;HRun=10;HaplotypeScore=85.8478;InbreedingCoeff=0.9077;MQ=69.59;MQ0=8;MQRankSum=-2.133;QD=26.31;ReadPosRankSum=1.449;VQSLOD=5.1096;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,19:25:48.10:535,48,0	1/1:3,2:5:12.03:133,12,0	0/0:40,0:13:3.33:0,3,217	0/0:37,0:15:19.94:0,20,239	0/0:21,0:21:54.16:0,54,822	1/1:4,26:29:81.22:900,81,0	1/1:1,6:7:21.06:234,21,0	1/1:2,30:32:87.18:947,87,0	1/1:1,11:12:30.08:334,30,0	1/1:5,26:29:81.19:890,81,0	1/1:5,17:22:63.17:701,63,0	1/1:6,16:22:37.10:491,37,0	1/1:4,14:18:51.10:548,51,0	1/1:5,11:16:33.07:368,33,0	0/1:2,0:16:1.26:78,0,1	1/1:4,18:22:54.03:584,54,0	1/1:4,9:13:24.05:266,24,0	1/1:2,21:22:60.16:668,60,0	1/1:6,21:25:24.51:614,25,0	1/1:1,19:20:54.14:596,54,0	1/1:2,9:11:27.05:301,27,0	0/0:12,0:12:33.09:0,33,482	1/1:4,13:16:39.10:434,39,0	1/1:2,8:10:24.06:267,24,0	1/1:1,20:21:57.15:635,57,0	0/0:22,0:23:62.69:0,63,923	0/0:32,0:33:95.77:0,96,1452	0/0:9,0:9:27.09:0,27,429
chr10	21950104	.	CA	C	2526.81	PASS	AB=0.712;AC=28;AF=0.500;AN=56;BaseQRankSum=1.210;DP=546;FS=4.027;HRun=14;HaplotypeScore=92.6874;InbreedingCoeff=0.5398;MQ=71.50;MQ0=8;MQRankSum=-0.046;QD=8.57;ReadPosRankSum=5.785;VQSLOD=3.1195;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,2:30:27.73:0,28,521	0/1:2,1:3:11.57:12,0,47	0/0:35,0:15:22.93:0,23,182	0/0:31,1:19:16.73:0,17,136	1/1:6,1:19:23.06:79,23,0	1/1:13,15:29:51.51:340,52,0	1/1:1,3:4:8.91:62,9,0	0/0:29,0:29:62.77:0,63,545	0/0:15,0:15:9.61:0,10,225	1/1:14,15:31:29.67:333,30,0	1/1:3,14:20:47.73:305,48,0	1/1:9,10:20:37.64:252,38,0	1/1:4,12:18:36.67:237,37,0	1/1:6,4:12:15.89:94,16,0	0/0:15,0:18:37.83:0,38,241	0/0:15,1:22:24.04:0,24,239	0/0:14,0:15:18.26:0,18,284	0/0:17,0:21:46.90:0,47,323	0/1:18,1:19:5.18:5,0,219	0/0:17,2:22:11.69:0,12,399	0/0:11,0:11:3.45:0,3,171	1/1:4,0:18:24.74:74,25,0	0/1:5,6:12:5.01:106,0,5	1/1:5,5:10:14.81:103,15,0	0/1:8,9:18:11.97:204,0,12	1/1:8,18:26:0.79:293,1,0	0/1:9,16:27:9.98:212,0,10	0/1:4,2:7:18.50:18,0,20
chr10	21950684	.	C	CAG	4792.17	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-5.914;DP=698;FS=1.928;HRun=0;HaplotypeScore=90.1242;InbreedingCoeff=0.9689;MQ=87.49;MQ0=0;MQRankSum=-2.753;QD=55.08;ReadPosRankSum=2.475;VQSLOD=5.4639;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,166,2605	0/0:7,0:7:21.07:0,21,342	0/0:22,0:22:59.34:0,59,944	0/0:26,0:26:64.14:0,64,998	0/0:31,0:31:90.30:0,90,1444	0/0:26,0:26:78.27:0,78,1272	0/0:28,0:28:84.26:0,84,1321	0/0:27,0:27:78.26:0,78,1248	0/0:22,0:22:66.16:0,66,1000	0/0:23,0:23:69.23:0,69,1100	0/0:23,0:23:66.21:0,66,1051	0/0:25,0:25:72.25:0,72,1174	0/0:27,0:27:81.26:0,81,1294	0/0:34,0:34:99:0,102,1636	1/1:0,30:30:87.30:1766,87,0	0/0:21,0:21:63.20:0,63,1005	0/0:34,0:34:99:0,102,1660	0/0:15,0:15:41.59:0,42,658	0/0:22,0:22:61.02:0,61,981	0/0:21,0:21:63.22:0,63,1027	0/0:30,0:30:84.24:0,84,1283	0/0:24,0:24:69.24:0,69,1123	0/0:16,0:16:48.15:0,48,757	0/0:30,0:30:90.29:0,90,1440	0/0:22,0:22:66.23:0,66,1072	1/1:3,23:27:29.27:1386,29,0	1/1:1,25:28:75.26:1518,75,0	1/1:0,2:2:6.02:122,6,0
chr10	21951592	.	TCCTC	T	4899.14	PASS	AB=1.000;AC=26;AF=0.464;AN=56;BaseQRankSum=-9.294;DP=731;FS=0.355;HRun=0;HaplotypeScore=244.2169;InbreedingCoeff=-0.6988;MQ=59.00;MQ0=5;MQRankSum=6.206;QD=7.97;ReadPosRankSum=5.155;VQSLOD=3.4947;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:5.72:0,6,75	0/1:13,0:13:47.66:48,0,117	0/0:49,0:35:54.37:0,54,789	0/0:47,0:23:12.67:0,13,265	0/1:27,0:27:98.86:99,0,145	0/1:33,0:33:99:273,0,112	0/1:23,0:22:1:263,0,1	0/1:29,0:29:23.53:295,0,24	0/1:28,0:28:99:160,0,176	0/1:26,0:26:99:206,0,227	0/1:24,0:24:45.13:275,0,45	0/1:29,0:28:99:267,0,180	0/1:26,0:25:85.31:336,0,85	0/1:29,0:29:99:240,0,228	1/1:5,28:33:48.10:817,48,0	0/1:28,0:28:99:141,0,333	0/1:15,0:15:56.92:96,0,57	0/1:14,0:14:18.58:19,0,95	0/1:23,0:23:99:165,0,111	0/1:23,0:23:99:123,0,112	0/1:17,0:17:23.43:85,0,23	0/1:23,0:23:70.52:71,0,241	0/1:16,0:16:97.60:124,0,98	0/1:18,0:18:12.72:114,0,13	0/1:31,0:31:20.20:373,0,20	0/1:35,0:35:99:132,0,310	0/1:34,0:32:59.34:59,0,474	0/1:18,0:18:99:119,0,193
chr10	21951599	.	TCC	T	5866.72	PASS	AB=0.948;AC=32;AF=0.571;AN=56;BaseQRankSum=-9.630;DP=797;FS=8.917;HRun=3;HaplotypeScore=249.2662;InbreedingCoeff=-0.4308;MQ=53.74;MQ0=5;MQRankSum=7.630;QD=8.41;ReadPosRankSum=-2.400;VQSLOD=-0.4004;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:9,13:22:24.99:25,0,35	0/1:15,0:15:11.48:113,0,11	0/0:48,0:30:64.39:0,64,768	0/0:51,0:15:15.57:0,16,283	0/1:31,1:32:79:177,0,79	0/1:30,1:31:25.12:270,0,25	1/1:23,4:26:28.83:315,29,0	0/1:30,0:30:38.81:391,0,39	0/1:30,2:32:70.34:227,0,70	0/1:26,2:28:55.92:344,0,56	1/1:23,4:27:19.43:301,19,0	0/1:37,2:38:71.59:305,0,72	0/1:27,5:31:6.70:312,0,7	0/1:33,1:34:52.19:286,0,52	0/1:32,0:32:3.87:234,0,4	0/1:27,2:29:38.56:203,0,39	0/1:17,1:18:25.12:160,0,25	0/1:14,0:14:39.99:89,0,40	0/1:24,1:25:11.18:255,0,11	0/1:24,2:26:42.69:265,0,43	0/1:15,0:15:7.74:88,0,8	0/1:23,0:23:86.23:86,0,90	0/1:19,1:20:10.34:198,0,10	1/1:19,0:19:24.82:185,25,0	1/1:33,0:33:39.81:434,40,0	1/1:37,0:37:27.37:273,27,0	0/1:38,0:37:56.93:150,0,57	1/1:20,0:20:3.64:181,4,0
chr10	21951601	.	C	CT	2156.89	PASS	AB=0.829;AC=22;AF=0.393;AN=56;BaseQRankSum=8.801;DP=794;FS=4.963;HRun=0;HaplotypeScore=254.2613;InbreedingCoeff=-0.6465;MQ=51.57;MQ0=6;MQRankSum=-3.568;QD=3.61;ReadPosRankSum=7.676;VQSLOD=2.5154;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:17,1:22:39.21:40,0,39	0/1:12,0:15:45.87:61,0,46	0/0:49,0:27:70.78:0,71,813	0/0:53,0:14:32.28:0,32,349	0/1:28,0:32:36:36,0,141	0/1:27,0:33:79.57:82,0,80	0/1:26,0:25:6.54:7,0,129	0/0:31,0:31:27.56:0,28,275	0/1:27,0:32:96.45:96,0,131	0/1:26,0:29:88.32:88,0,97	0/1:21,1:26:47.52:48,0,121	0/1:35,0:38:86.38:94,0,86	0/1:29,0:31:75.63:76,0,85	0/1:28,0:33:21.38:21,0,158	0/0:33,0:33:52.04:0,52,266	0/1:20,0:27:50.23:136,0,50	0/1:14,0:18:44.22:51,0,44	0/1:11,0:14:35.36:57,0,35	0/1:23,0:26:34.87:166,0,35	0/1:20,0:26:89.37:113,0,89	0/0:13,0:14:3.88:0,4,54	0/1:13,0:22:71:110,0,71	0/1:11,2:19:11.77:66,0,12	0/0:16,0:16:17.16:0,17,73	0/1:28,2:33:33.68:34,0,144	0/1:19,14:34:29.54:438,0,30	0/1:21,18:38:84.62:354,0,85	0/1:14,7:21:68.15:142,0,68
chr10	21951611	.	T	TCTCTCT	17265.49	PASS	AB=1.000;AC=49;AF=0.875;AN=56;BaseQRankSum=-0.378;DP=815;FS=0.000;HRun=0;HaplotypeScore=264.0853;InbreedingCoeff=0.5378;MQ=50.49;MQ0=10;MQRankSum=-1.983;QD=23.98;ReadPosRankSum=-0.628;VQSLOD=4.0693;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:23:1.61:164,0,2	1/1:11,4:17:21.04:529,21,0	0/1:63,0:27:4.55:5,0,145	0/0:61,0:13:7.73:0,8,45	1/1:33,0:33:36.56:737,37,0	1/1:29,0:29:50.13:915,50,0	1/1:22,0:21:32.87:296,33,0	1/1:29,0:29:46.03:412,46,0	1/1:35,0:35:52.09:1035,52,0	1/1:32,0:32:59.99:946,60,0	1/1:24,0:24:47.97:631,48,0	1/1:41,0:40:69.25:967,69,0	1/1:32,0:31:66.63:1021,67,0	1/1:32,0:32:50.92:728,51,0	0/0:33,0:33:54.13:0,54,753	1/1:31,0:31:67.68:1068,68,0	1/1:16,0:16:2.56:595,3,0	1/1:14,0:14:30.04:646,30,0	1/1:25,0:25:57:1106,57,0	1/1:25,0:25:51.13:984,51,0	1/1:14,0:14:9.99:215,10,0	1/1:25,0:25:48.15:1217,48,0	1/1:19,0:19:41.28:686,41,0	1/1:19,0:19:12.75:102,13,0	1/1:31,0:31:44.28:692,44,0	1/1:33,0:33:35.39:721,35,0	0/1:37,0:36:8.57:544,0,9	1/1:19,0:19:32.20:300,32,0
chr10	21951630	.	TTC	T	7165.10	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=6.057;DP=811;FS=0.314;HRun=0;HaplotypeScore=243.1562;InbreedingCoeff=0.9756;MQ=55.82;MQ0=9;MQRankSum=-5.386;QD=26.15;ReadPosRankSum=-0.525;VQSLOD=4.7028;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:32.70:0,33,555	0/0:11,0:11:23.06:0,23,363	0/0:61,0:27:64.45:0,64,804	0/0:66,0:19:8.78:0,9,364	0/0:30,0:30:55.07:0,55,919	1/1:9,20:29:54.48:747,54,0	1/1:7,11:17:25.59:297,26,0	0/0:29,0:29:77.71:0,78,1208	0/0:30,0:30:48.29:0,48,899	1/1:8,21:29:79.34:926,79,0	1/1:8,17:25:48.65:562,49,0	1/1:9,34:42:99:1274,102,0	1/1:11,25:36:80.61:932,81,0	1/1:7,26:32:76.73:945,77,0	0/0:42,0:42:99:0,108,1825	0/0:35,0:35:87.54:0,88,1422	0/0:21,0:21:33.79:0,34,516	0/0:16,0:16:34.29:0,34,517	0/0:20,0:19:25.30:0,25,459	0/0:26,0:26:53.22:0,53,873	0/0:12,0:12:15.53:0,16,302	0/0:27,0:27:56.11:0,56,911	1/1:6,15:21:45.67:517,46,0	1/1:3,13:16:35.93:446,36,0	1/1:11,13:24:28.10:520,28,0	0/0:29,2:31:7.36:0,7,1201	0/0:45,0:44:99:0,123,2014	0/0:15,0:15:27.09:0,27,459
chr10	21951632	.	C	CTCAT	5941.11	PASS	AB=0.988;AC=23;AF=0.411;AN=56;BaseQRankSum=10.657;DP=800;FS=11.884;HRun=0;HaplotypeScore=257.9752;InbreedingCoeff=-0.2688;MQ=55.92;MQ0=9;MQRankSum=-10.201;QD=12.12;ReadPosRankSum=-1.687;VQSLOD=2.2971;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:34:0,34,586	0/1:11,0:11:48.30:48,0,216	0/0:61,0:27:74.42:0,74,1019	0/0:63,0:19:9.70:0,10,521	0/1:28,0:28:99:113,0,775	0/1:27,3:30:25.97:705,0,26	0/1:19,0:18:25.97:161,0,26	0/0:30,0:30:84.27:0,84,1398	0/1:29,0:29:42.54:43,0,781	0/1:27,1:28:58.07:606,0,58	0/1:26,0:26:20.42:327,0,20	1/1:42,0:41:12.91:690,13,0	0/1:33,1:35:27.68:636,0,28	1/1:30,1:30:30.16:772,30,0	0/0:42,0:42:99:0,111,2078	0/0:35,0:35:80.75:0,81,1342	0/1:21,0:21:99:105,0,493	0/1:15,0:15:64.31:64,0,394	0/1:20,0:19:99:165,0,321	0/1:25,0:25:99:126,0,796	0/1:12,0:12:12.80:13,0,328	0/1:27,0:27:99:203,0,632	0/1:22,0:22:4.24:503,0,4	1/1:16,0:16:2.26:190,2,0	0/1:20,0:21:41.66:447,0,42	0/1:32,0:32:23.98:24,0,1368	0/0:45,0:44:99:0,129,2270	0/0:13,0:13:33.04:0,33,509
chr10	21951640	.	CTT	C	2534.06	PASS	AB=0.971;AC=16;AF=0.286;AN=56;BaseQRankSum=11.310;DP=801;FS=1.292;HRun=3;HaplotypeScore=231.0930;InbreedingCoeff=0.3514;MQ=60.39;MQ0=5;MQRankSum=-6.707;QD=7.26;ReadPosRankSum=1.358;VQSLOD=-0.0148;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:39.04:0,39,659	0/1:11,0:11:0.92:1,0,400	0/0:58,0:33:33.90:0,34,823	0/1:56,1:20:1.95:2,0,428	0/0:26,0:26:47.32:0,47,1030	0/1:34,1:35:65.51:300,0,66	1/1:17,0:16:4.73:114,5,0	0/0:37,0:37:98.05:0,98,1584	0/0:29,0:29:62.31:0,62,1139	0/1:32,1:33:76.30:301,0,76	0/1:29,0:29:99:166,0,116	1/1:40,0:39:58.82:491,59,0	0/1:36,1:37:24:300,0,24	0/1:32,1:32:23.68:378,0,24	0/0:48,0:48:99:0,129,2182	0/0:35,0:35:92.77:0,93,1737	0/0:20,0:20:26.88:0,27,594	0/0:15,0:15:22.54:0,23,548	0/0:18,0:17:12.43:0,12,536	0/0:22,0:22:17.75:0,18,949	0/0:13,0:13:10.58:0,11,405	0/0:26,0:26:36.75:0,37,1031	0/1:19,2:21:2.99:243,0,3	1/1:15,0:15:29.45:176,29,0	1/1:20,0:20:20.09:233,20,0	0/0:32,0:32:67.53:0,68,1477	0/0:41,0:40:99:0,123,2233	0/0:13,0:13:36.10:0,36,591
chr10	21952570	.	AAAT	A	1317.77	PASS	AB=1.000;AC=23;AF=0.460;AN=50;BaseQRankSum=6.432;DP=233;FS=7.694;HRun=0;HaplotypeScore=44.1058;InbreedingCoeff=0.5649;MQ=72.70;MQ0=0;MQRankSum=0.384;QD=11.56;ReadPosRankSum=2.625;VQSLOD=1.5243;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,6:13:9.03:120,9,0	0/0:4,0:4:6.02:0,6,112	./.	0/0:7,0:6:5.87:0,6,35	1/1:4,2:6:8.89:93,9,0	0/1:11,0:11:21.15:59,0,21	./.	0/0:29,0:29:51.14:0,51,827	0/0:6,0:6:9.03:0,9,172	1/1:13,0:13:32.48:244,32,0	1/1:8,0:8:6.92:48,7,0	0/1:10,0:10:11.50:17,0,11	1/1:8,0:8:5.99:49,6,0	1/1:5,0:5:6:55,6,0	0/0:8,0:8:3.01:0,3,36	0/0:6,0:6:9.03:0,9,172	0/0:16,0:16:33.11:0,33,623	0/0:8,0:8:15.05:0,15,272	0/0:7,0:7:9.03:0,9,175	0/0:9,0:9:6.02:0,6,112	0/0:1,0:1:3.01:0,3,61	./.	0/0:5,0:5:12.04:0,12,176	0/1:4,0:4:5.21:5,0,77	1/1:10,0:10:17.98:154,18,0	1/1:1,5:6:15.04:192,15,0	1/1:3,4:7:6.02:78,6,0	1/1:1,12:13:27.09:383,27,0
chr10	21952586	.	A	AATG	319.01	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=5.300;DP=188;FS=4.975;HRun=0;HaplotypeScore=42.7502;InbreedingCoeff=0.4879;MQ=61.00;MQ0=0;MQRankSum=2.998;QD=4.49;ReadPosRankSum=3.551;VQSLOD=0.9590;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:7:8.96:0,9,72	0/0:2,0:2:6.02:0,6,102	0/0:4,0:2:3.01:0,3,31	0/1:4,0:4:4.99:5,0,26	0/0:4,0:4:6.88:0,7,53	0/1:12,0:12:17.05:50,0,17	0/0:2,0:2:2.97:0,3,20	0/0:29,0:29:84.06:0,84,1097	0/0:5,0:5:12.03:0,12,176	1/1:12,0:12:27.64:148,28,0	0/1:6,0:6:6.35:54,0,6	1/1:8,0:8:8.16:50,8,0	1/1:4,0:4:4.44:14,4,0	0/0:4,0:4:0.47:0,0,1	1/1:0,6:6:3.01:69,3,0	0/0:4,0:4:12.03:0,12,178	0/0:14,0:14:39.07:0,39,600	0/0:6,0:6:18.05:0,18,281	0/0:6,0:6:17.78:0,18,205	0/0:4,0:4:11.96:0,12,145	0/0:1,0:1:3.01:0,3,51	0/0:1,0:1:2.97:0,3,20	1/1:6,0:6:1.84:4,2,0	1/1:4,0:4:6.94:52,7,0	1/1:9,0:9:12.03:37,12,0	0/0:6,0:6:14.50:0,14,114	0/0:5,0:5:9:0,9,82	0/0:13,0:13:30:0,30,263
chr10	21952595	.	GATAATA	G	151.56	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=1.288;DP=205;FS=11.317;HRun=0;HaplotypeScore=58.4908;InbreedingCoeff=0.4435;MQ=60.89;MQ0=0;MQRankSum=-0.479;QD=18.95;ReadPosRankSum=-0.125;VQSLOD=1.6649;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:7:9.03:0,9,154	0/0:3,0:3:5.97:0,6,119	0/0:4,0:2:3.01:0,3,98	0/0:4,0:4:5.89:0,6,38	1/1:0,5:5:12.04:216,12,0	0/0:10,0:10:14.90:0,15,133	0/0:3,0:3:6.02:0,6,85	0/0:32,0:32:66.20:0,66,1306	0/0:4,0:4:12.04:0,12,349	0/0:11,0:11:29.43:0,29,183	0/0:6,0:6:8.96:0,9,75	0/0:6,0:6:5.93:0,6,40	0/0:4,0:4:5.91:0,6,38	0/0:5,0:5:5.90:0,6,43	0/0:8,0:8:5.99:0,6,98	0/0:5,0:5:12.04:0,12,303	0/0:14,0:14:36.12:0,36,1082	0/0:6,0:6:12.04:0,12,374	0/0:11,0:11:27.08:0,27,480	0/0:5,0:5:12.04:0,12,273	0/0:2,0:2:6.02:0,6,150	1/1:0,3:3:3.01:37,3,0	0/0:6,0:6:15.04:0,15,384	0/0:4,0:4:6.02:0,6,160	0/0:7,0:7:17.68:0,18,111	0/0:7,0:7:18.06:0,18,313	0/0:7,0:7:15.03:0,15,213	0/0:16,0:15:36.12:0,36,614
chr10	21952915	.	GCACACACACACACACACACA	G	1952.31	PASS	AB=0.924;AC=18;AF=0.321;AN=56;BaseQRankSum=0.058;DP=501;FS=5.675;HRun=0;HaplotypeScore=234.6676;InbreedingCoeff=0.1348;MQ=67.30;MQ0=19;MQRankSum=-2.505;QD=7.90;ReadPosRankSum=-1.154;VQSLOD=2.1715;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:34,0:32:99:156,0,129	0/1:6,0:6:4.34:97,0,4	0/0:35,0:23:5.98:0,6,62	0/0:31,0:19:5.99:0,6,50	0/1:12,0:14:1:1,0,158	0/0:11,0:9:12.01:0,12,185	0/0:22,0:22:20.99:0,21,201	0/1:28,0:28:43.47:43,0,56	0/1:7,6:13:15.85:306,0,16	0/0:24,0:22:44.31:0,44,930	0/0:5,0:4:6.02:0,6,120	0/0:16,0:16:22.12:0,22,363	0/0:16,0:16:27.03:0,27,613	0/0:12,0:16:11.97:0,12,487	0/0:16,0:16:15.04:0,15,681	1/1:10,8:18:11.83:474,12,0	1/1:12,0:11:8.97:190,9,0	0/1:10,0:10:24.49:92,0,24	1/1:10,0:9:11.67:192,12,0	1/1:9,0:9:4.05:114,4,0	0/1:47,0:44:55.14:317,0,55	0/0:4,0:12:14.85:0,15,200	0/0:9,0:8:15.03:0,15,381	0/0:24,0:26:48.94:0,49,1742	0/0:14,0:14:17.09:0,17,426	0/1:25,0:25:37.23:37,0,423	0/1:13,0:14:79.64:80,0,120	0/1:4,0:5:22.31:22,0,48
chr10	21952965	.	TCACA	T	918.89	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=6.846;DP=624;FS=21.015;HRun=0;HaplotypeScore=134.2571;InbreedingCoeff=0.7833;MQ=49.92;MQ0=37;MQRankSum=-0.010;QD=16.41;ReadPosRankSum=1.495;VQSLOD=1.8294;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:49:62:0,62,970	0/0:7,0:7:8.64:0,9,116	0/0:12,0:2:6.01:0,6,65	0/0:27,0:7:0.15:0,0,81	0/0:25,0:24:39.66:0,40,522	0/0:13,0:10:17.94:0,18,266	0/0:26,0:26:54.67:0,55,798	0/0:20,0:17:45.02:0,45,647	0/0:16,0:15:11.10:0,11,259	0/0:30,0:27:55.83:0,56,888	0/0:15,0:13:27.08:0,27,395	0/0:17,0:17:31.12:0,31,425	0/0:24,0:24:46.01:0,46,760	0/0:19,0:18:41.85:0,42,655	0/0:19,0:18:20.41:0,20,228	0/0:23,0:22:9.35:0,9,427	0/0:30,0:25:60.20:0,60,897	0/0:11,0:11:18.79:0,19,217	0/0:21,0:19:42.10:0,42,600	0/0:10,0:9:18.04:0,18,232	0/0:53,0:44:50.52:0,51,838	0/0:27,0:27:48.13:0,48,701	0/0:16,0:15:26.20:0,26,514	0/0:35,0:34:48.63:0,49,870	0/0:19,0:18:39.12:0,39,603	1/1:14,13:26:8.80:566,9,0	1/1:3,15:18:8.37:145,8,0	1/1:10,1:11:24.08:337,24,0
chr10	21952980	.	AAC	A	31.22	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.510;DP=643;FS=25.971;HRun=0;HaplotypeScore=111.2558;InbreedingCoeff=0.7399;MQ=55.68;MQ0=26;MQRankSum=-0.772;QD=1.30;ReadPosRankSum=-0.793;VQSLOD=0.1947;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:39:56.67:0,57,1409	0/0:8,0:8:18.06:0,18,292	0/0:31,0:12:31.89:0,32,414	0/0:49,0:24:24.29:0,24,612	0/0:22,0:21:50.90:0,51,804	0/0:15,0:14:33.11:0,33,530	0/0:27,0:27:45.07:0,45,748	0/0:20,0:19:42.14:0,42,675	0/0:13,0:13:27.09:0,27,403	0/0:26,0:24:56.22:0,56,906	0/0:16,0:15:36.12:0,36,590	0/0:16,0:16:35.99:0,36,591	0/0:24,0:24:57.09:0,57,875	0/0:17,0:16:48.16:0,48,776	1/1:4,20:23:9.03:114,9,0	0/0:23,0:22:51.02:0,51,748	0/0:30,0:26:71.48:0,71,1066	0/0:8,0:8:10.39:0,10,153	0/0:20,1:20:9.98:0,10,645	0/0:14,0:13:39.11:0,39,572	0/0:42,0:38:65.20:0,65,1058	0/0:31,0:31:69.23:0,69,1098	0/0:18,0:17:4.26:0,4,607	0/0:31,0:30:54.18:0,54,865	0/0:21,0:20:45.15:0,45,751	0/0:23,0:23:53.16:0,53,659	0/0:18,0:17:21.22:0,21,214	0/0:15,0:15:39.05:0,39,461
chr10	21953093	.	CATT	C	11220.85	PASS	AB=0.522;AC=25;AF=0.446;AN=56;BaseQRankSum=13.813;DP=612;FS=0.000;HRun=0;HaplotypeScore=93.7643;InbreedingCoeff=0.9229;MQ=84.93;MQ0=0;MQRankSum=-5.425;QD=41.25;ReadPosRankSum=3.998;VQSLOD=6.1861;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,18:20:42.14:716,42,0	1/1:0,12:12:33.11:563,33,0	0/0:24,0:24:65.59:0,66,1420	0/0:18,0:18:48.16:0,48,997	0/0:29,0:29:75.26:0,75,1723	0/0:24,0:24:72.13:0,72,1429	0/0:20,0:20:57.18:0,57,1270	1/1:4,29:32:84.29:1432,84,0	1/1:1,10:10:24.08:409,24,0	0/0:27,0:27:81.28:0,81,1868	0/0:20,0:20:57.17:0,57,1224	0/0:19,0:19:51.17:0,51,1150	0/0:27,0:27:75.26:0,75,1729	0/0:16,0:16:48.16:0,48,1107	0/0:28,0:28:78.27:0,78,1796	1/1:0,23:23:66.23:1125,66,0	1/1:1,22:23:51.17:869,51,0	1/1:0,4:4:12.04:205,12,0	1/1:3,22:24:60.14:965,60,0	1/1:0,24:24:60.21:1023,60,0	1/1:1,21:21:39.08:665,39,0	0/0:20,0:20:57.03:0,57,1118	0/0:29,0:29:84.29:0,84,1934	0/0:18,0:18:48.16:0,48,1070	0/0:21,0:21:63.21:0,63,1404	0/1:3,32:35:36.13:1458,0,36	1/1:0,31:31:81.28:1381,81,0	1/1:0,9:9:24.08:409,24,0
chr10	21953266	.	ATCTCTC	A	2173.08	PASS	AB=0.844;AC=35;AF=0.673;AN=52;BaseQRankSum=4.915;DP=640;FS=38.715;HRun=0;HaplotypeScore=146.2683;InbreedingCoeff=0.4813;MQ=63.05;MQ0=26;MQRankSum=-4.260;QD=5.92;ReadPosRankSum=1.933;VQSLOD=0.9827;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:18,0:16:26.22:39,0,26	1/1:5,0:8:15.01:205,15,0	./.	0/0:65,0:21:1.55:0,2,5	1/1:12,0:15:3.01:42,3,0	1/1:14,6:19:6.02:121,6,0	1/1:13,4:17:0.47:1,0,0	1/1:44,0:43:0.30:1,0,0	0/1:10,0:14:11.81:30,0,12	1/1:15,6:19:21.27:378,21,0	1/1:19,4:23:15.05:273,15,0	1/1:4,1:6:6.02:102,6,0	1/1:16,7:24:12.04:207,12,0	0/0:23,0:24:27.96:0,28,602	0/0:33,0:35:38.29:0,38,1054	1/1:18,0:19:8.86:95,9,0	0/0:11,0:9:3:0,3,27	1/1:15,0:14:10.51:102,11,0	./.	1/1:18,0:21:7.84:89,8,0	1/1:24,0:24:13.08:117,13,0	1/1:8,0:16:6.02:74,6,0	1/1:14,4:18:12.04:224,12,0	0/1:16,2:19:30.97:181,0,31	1/1:13,0:11:3.01:61,3,0	0/0:33,0:32:27.09:0,27,649	0/0:24,0:25:36.12:0,36,779	0/0:13,0:13:6.02:0,6,143
chr10	21953371	.	TTC	T	2066.07	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.877;DP=839;FS=0.483;HRun=0;HaplotypeScore=126.3374;InbreedingCoeff=0.9823;MQ=46.36;MQ0=41;MQRankSum=-4.547;QD=27.19;ReadPosRankSum=-0.997;VQSLOD=4.6750;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:41.31:0,41,589	0/0:7,0:7:12.04:0,12,199	0/0:101,1:12:17.97:0,18,193	0/0:136,1:17:17.85:0,18,204	1/1:2,28:30:66.74:792,67,0	0/0:31,0:31:81.28:0,81,1322	0/0:13,0:13:30.10:0,30,496	0/0:39,0:39:83.72:0,84,1378	0/0:24,0:24:57.19:0,57,930	0/0:27,0:27:75.26:0,75,1236	0/0:11,0:11:27.09:0,27,449	0/0:19,0:19:57.16:0,57,892	0/0:27,0:27:57.67:0,58,978	0/0:18,0:18:54.17:0,54,858	1/1:2,22:25:69.14:833,69,0	0/0:19,0:19:51.17:0,51,835	0/0:22,0:22:54.09:0,54,844	0/0:19,0:19:44.27:0,44,623	0/0:17,0:15:33.09:0,33,521	0/0:32,0:30:69.20:0,69,1087	0/0:20,0:18:45.15:0,45,743	1/1:5,16:20:50.95:584,51,0	0/0:21,0:20:57.18:0,57,902	0/0:26,0:26:51.11:0,51,802	0/0:20,0:20:52.49:0,52,889	0/0:44,0:44:99:0,102,1630	0/0:25,0:25:66.14:0,66,1026	0/0:13,0:13:27.05:0,27,405
chr10	21953397	.	TTCTC	T	2075.95	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=10.453;DP=819;FS=3.494;HRun=0;HaplotypeScore=165.5772;InbreedingCoeff=0.8246;MQ=50.91;MQ0=46;MQRankSum=-8.687;QD=14.42;ReadPosRankSum=-1.921;VQSLOD=3.2103;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:30:59.96:0,60,1441	0/0:7,0:7:18.06:0,18,472	0/1:86,0:13:4.43:4,0,183	0/0:124,0:17:27.54:0,28,289	1/1:5,35:40:81.99:1355,82,0	0/0:32,0:32:90.29:0,90,2198	0/0:14,0:13:32.14:0,32,772	0/0:32,0:31:78.26:0,78,1744	0/0:23,0:23:60.21:0,60,1516	0/0:33,0:33:90.31:0,90,2214	0/0:15,0:14:39.13:0,39,994	0/0:23,0:23:69.22:0,69,1689	0/0:35,0:35:99:0,102,2570	0/0:21,0:21:63.22:0,63,1609	0/0:33,0:33:87.30:0,87,2170	0/0:20,0:20:51.18:0,51,1306	0/0:19,0:21:51.12:0,51,1212	0/0:19,0:19:38.54:0,39,1103	0/0:14,0:12:24.08:0,24,609	0/0:27,0:26:75.26:0,75,1907	0/0:20,0:17:45.15:0,45,1154	1/1:2,16:17:51.16:841,51,0	0/0:17,0:17:51.18:0,51,1331	0/0:22,0:23:62.57:0,63,1511	0/0:24,0:24:72.25:0,72,1766	0/0:35,0:35:99:0,102,2465	0/0:24,0:24:69.24:0,69,1749	0/0:7,0:7:21.07:0,21,475
chr10	21953426	.	CTG	C	1669.66	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.667;DP=799;FS=0.000;HRun=0;HaplotypeScore=171.0725;InbreedingCoeff=0.9659;MQ=56.63;MQ0=19;MQRankSum=-7.304;QD=25.69;ReadPosRankSum=-3.843;VQSLOD=3.2064;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:33:68.83:0,69,899	0/0:7,0:7:18.04:0,18,251	0/0:65,0:14:11.62:0,12,100	0/0:103,1:35:13.06:0,13,363	1/1:9,34:43:78.10:1109,78,0	0/0:34,0:34:93.04:0,93,1701	0/0:18,0:17:42.04:0,42,699	0/0:40,0:39:83.82:0,84,1080	0/0:21,0:21:49.31:0,49,592	0/0:34,0:34:96.28:0,96,1710	0/0:19,0:19:57.14:0,57,992	0/0:19,0:19:54.11:0,54,864	0/0:30,0:30:84.26:0,84,1532	0/0:26,0:26:75.26:0,75,1400	0/0:32,0:32:82.73:0,83,818	0/0:19,0:19:41.22:0,41,724	0/0:20,0:20:39.62:0,40,517	0/0:16,0:16:26.72:0,27,428	0/0:13,0:12:36.08:0,36,432	0/0:28,0:27:70.93:0,71,835	0/0:20,0:18:34.01:0,34,510	1/1:6,16:22:48.63:682,49,0	0/0:21,0:21:60.17:0,60,1066	0/0:27,0:27:78.19:0,78,1365	0/0:22,0:22:63.14:0,63,1106	0/0:28,0:28:81.17:0,81,1395	0/0:22,0:22:66.03:0,66,1117	0/0:11,0:11:33.08:0,33,563
chr10	21953428	.	G	GTC	5975.13	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=8.942;DP=805;FS=5.822;HRun=0;HaplotypeScore=158.9624;InbreedingCoeff=0.9169;MQ=56.50;MQ0=19;MQRankSum=0.529;QD=16.51;ReadPosRankSum=0.001;VQSLOD=4.1384;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:35,0:33:44.81:673,45,0	1/1:7,0:7:15.03:153,15,0	0/0:68,0:15:11.50:0,11,116	0/1:112,0:35:11.51:12,0,275	0/0:41,0:41:51.52:0,52,208	0/0:34,0:34:87.27:0,87,1090	0/0:16,0:15:36.11:0,36,455	1/1:39,0:38:64.17:904,64,0	1/1:20,0:20:42.07:444,42,0	0/0:33,0:33:84.27:0,84,1066	0/0:20,0:20:57.17:0,57,710	0/0:19,0:19:39.11:0,39,483	0/0:29,0:29:81.26:0,81,1026	0/0:27,0:27:69.20:0,69,863	1/1:9,23:32:78.25:1266,78,0	1/1:21,0:21:51.10:535,51,0	1/1:20,0:20:39.10:434,39,0	1/1:16,0:16:10.32:310,10,0	1/1:12,0:11:24.06:270,24,0	1/1:28,0:27:57.09:581,57,0	1/1:20,0:18:31:394,31,0	0/0:23,0:23:28.20:0,28,116	0/0:21,0:21:54.14:0,54,647	0/0:27,0:27:75.17:0,75,906	0/0:23,0:23:54.17:0,54,687	0/0:27,0:27:75.18:0,75,908	0/0:24,0:24:60.06:0,60,717	0/0:11,0:11:27.09:0,27,343
chr10	21953434	.	C	CTT	9989.17	PASS	AB=0.552;AC=21;AF=0.375;AN=56;BaseQRankSum=-6.459;DP=829;FS=3.573;HRun=1;HaplotypeScore=152.4223;InbreedingCoeff=0.9231;MQ=55.24;MQ0=29;MQRankSum=0.517;QD=37.41;ReadPosRankSum=-0.051;VQSLOD=4.9328;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,29:35:12.74:1147,13,0	1/1:1,6:7:15.05:290,15,0	0/0:70,0:13:17.67:0,18,224	0/0:114,0:29:38.59:0,39,426	0/0:41,0:41:80.61:0,81,621	0/0:32,0:32:90.29:0,90,1351	0/0:16,0:15:36.12:0,36,549	1/1:5,40:44:70.50:1916,70,0	1/1:10,14:24:63.06:951,63,0	0/0:33,0:33:99:0,99,1407	0/0:24,0:24:69.18:0,69,968	0/0:18,0:18:53.92:0,54,701	0/0:28,0:28:84.25:0,84,1257	0/0:27,0:27:78.17:0,78,1117	1/1:34,0:34:53.94:650,54,0	1/1:7,16:23:66.13:1103,66,0	1/1:6,15:21:51.06:838,51,0	0/1:3,13:16:10.06:543,0,10	1/1:2,10:11:30.09:522,30,0	1/1:6,21:26:77.78:1224,78,0	1/1:7,14:19:38.97:804,39,0	0/0:23,0:23:47.15:0,47,348	0/0:21,0:21:60.17:0,60,870	0/0:28,0:28:81.24:0,81,1181	0/0:24,0:24:69.17:0,69,951	0/0:26,0:26:78.22:0,78,1155	0/0:24,0:24:72.11:0,72,979	0/0:11,0:11:33.08:0,33,459
chr10	21953517	.	C	CT	4093.22	PASS	AB=0.614;AC=21;AF=0.375;AN=56;BaseQRankSum=13.372;DP=737;FS=11.053;HRun=1;HaplotypeScore=185.1538;InbreedingCoeff=0.1674;MQ=60.91;MQ0=12;MQRankSum=-4.472;QD=12.44;ReadPosRankSum=8.891;VQSLOD=0.9569;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:9,22:30:0.74:416,0,1	0/1:2,3:5:23.96:66,0,24	0/0:56,0:23:49.79:0,50,552	0/0:112,0:46:89.75:0,90,1090	0/1:4,21:25:46.43:123,0,46	0/0:26,0:25:72.22:0,72,979	0/0:19,0:19:57.19:0,57,788	0/1:12,10:21:61.88:165,0,62	1/1:4,19:23:9.10:371,9,0	0/0:16,0:16:48.07:0,48,625	0/0:31,0:31:87.28:0,87,1194	0/0:27,0:27:75.24:0,75,1022	0/0:18,0:18:54.18:0,54,751	0/0:18,0:18:51.16:0,51,690	0/1:3,17:20:8.13:93,0,8	0/1:11,20:31:32.17:452,0,32	0/1:12,18:30:35.90:344,0,36	0/1:6,8:14:15.17:178,0,15	1/1:0,8:8:24.01:225,24,0	0/1:10,18:28:47.03:352,0,47	1/1:8,14:22:1.45:310,1,0	1/1:3,19:22:14.23:145,14,0	0/0:25,0:25:72.24:0,72,995	0/0:32,0:32:81.22:0,81,1091	0/0:25,0:25:72.14:0,72,957	0/1:9,13:22:88.45:317,0,88	1/1:2,20:21:62.70:495,63,0	0/1:2,2:4:29.04:41,0,29
chr10	21953518	.	C	CT	4347.79	PASS	AB=0.624;AC=24;AF=0.429;AN=56;BaseQRankSum=13.578;DP=737;FS=10.946;HRun=0;HaplotypeScore=182.3261;InbreedingCoeff=0.4398;MQ=61.07;MQ0=11;MQRankSum=-4.328;QD=13.14;ReadPosRankSum=7.248;VQSLOD=4.7129;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,22:30:28.62:476,29,0	0/1:2,3:5:18.93:66,0,19	0/0:54,0:22:45.08:0,45,503	0/0:112,0:46:81.10:0,81,980	0/1:4,21:25:35.74:145,0,36	0/0:27,0:26:72.19:0,72,980	0/0:19,0:19:57.19:0,57,796	0/1:12,10:21:11.71:224,0,12	1/1:4,19:23:19.63:404,20,0	0/0:17,0:17:47.68:0,48,608	0/0:30,0:30:90.21:0,90,1205	0/0:26,0:26:75.21:0,75,1019	0/0:19,0:19:54.18:0,54,752	0/0:19,0:19:48.16:0,48,654	0/1:5,17:22:0.74:93,0,1	1/1:10,20:30:23.38:505,23,0	1/1:12,18:30:2.12:358,2,0	0/1:5,8:13:7.90:149,0,8	1/1:0,8:8:24.01:225,24,0	0/1:11,18:29:14.03:377,0,14	1/1:8,14:22:20.75:333,21,0	1/1:4,18:22:19.66:138,20,0	0/0:25,0:25:75.24:0,75,1028	0/0:32,0:32:84.05:0,84,1101	0/0:24,0:24:72.17:0,72,977	0/1:8,13:21:55.99:320,0,56	1/1:2,20:21:62.70:495,63,0	0/1:3,2:5:24.11:41,0,24
chr10	21953561	.	TTCTCTGTCTC	T	2902.51	PASS	AB=0.548;AC=5;AF=0.089;AN=56;BaseQRankSum=4.454;DP=736;FS=0.591;HRun=0;HaplotypeScore=278.5994;InbreedingCoeff=0.7562;MQ=67.64;MQ0=6;MQRankSum=-7.313;QD=54.76;ReadPosRankSum=-1.353;VQSLOD=2.9265;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:66.23:0,66,3168	0/0:7,0:7:18.06:0,18,542	0/0:35,0:24:29.81:0,30,916	0/0:63,0:39:35.38:0,35,938	0/0:24,0:24:45.14:0,45,2079	0/0:30,0:30:78.25:0,78,3604	0/0:27,0:27:74.48:0,74,3476	0/0:54,0:54:99:0,120,3352	0/0:25,0:25:69.20:0,69,1832	0/0:27,0:27:75.26:0,75,3335	0/0:22,0:22:48.13:0,48,1983	0/0:32,0:32:81.26:0,81,3801	0/0:23,0:23:54.17:0,54,2443	0/0:19,0:19:45.15:0,45,2028	0/0:32,0:32:75.26:0,75,3674	0/0:25,0:25:63.22:0,63,1863	0/0:33,0:33:77.02:0,77,1986	0/0:12,0:12:15.27:0,15,502	0/0:10,0:10:24.08:0,24,759	0/0:35,0:35:90.26:0,90,2522	0/0:21,0:21:44.67:0,45,1375	0/0:18,0:18:42.14:0,42,2138	0/0:28,0:28:72.21:0,72,3029	0/0:26,0:26:60.17:0,60,2655	0/0:23,0:23:63.20:0,63,2851	0/1:4,19:23:99:1407,0,114	1/1:7,18:24:48.02:1255,48,0	1/1:0,5:5:12.04:366,12,0
chr10	21953577	.	GTC	G	6102.47	PASS	AB=1.000;AC=22;AF=0.393;AN=56;BaseQRankSum=11.609;DP=741;FS=2.781;HRun=0;HaplotypeScore=147.3540;InbreedingCoeff=0.8276;MQ=66.07;MQ0=5;MQRankSum=-3.971;QD=22.27;ReadPosRankSum=1.717;VQSLOD=5.6565;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:26:72.24:0,72,1188	1/1:0,9:9:18.06:229,18,0	0/0:40,0:26:3.90:0,4,476	0/0:54,0:34:40.24:0,40,530	0/0:22,0:22:51.16:0,51,816	0/0:31,0:31:48.32:0,48,1229	0/0:32,0:32:84.13:0,84,1286	1/1:10,39:49:99:1421,114,0	1/1:7,19:26:45.89:732,46,0	0/0:30,0:30:75.21:0,75,1200	0/0:20,0:20:48.16:0,48,793	0/0:31,0:31:78.27:0,78,1286	0/0:22,0:22:54.13:0,54,847	0/0:19,0:19:51.16:0,51,827	0/0:29,0:29:81.28:0,81,1347	1/1:11,17:28:63.19:786,63,0	1/1:8,24:32:63.20:801,63,0	1/1:7,5:12:15.05:191,15,0	1/1:2,10:12:27.08:343,27,0	1/1:7,28:35:72.23:916,72,0	1/1:4,14:19:37:460,37,0	0/0:20,0:20:54.18:0,54,890	0/0:27,0:27:66.21:0,66,1074	0/0:33,0:33:75.24:0,75,1209	0/0:29,0:29:75.21:0,75,1202	0/1:24,0:24:87.86:88,0,181	0/1:23,0:22:9.01:97,0,9	1/1:5,0:5:10.26:40,10,0
chr10	21953996	.	A	AT	9297.93	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-18.691;DP=697;FS=7.324;HRun=4;HaplotypeScore=90.2172;InbreedingCoeff=0.9949;MQ=74.03;MQ0=0;MQRankSum=-1.714;QD=37.19;ReadPosRankSum=0.134;VQSLOD=4.3857;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,31:32:84.28:1149,84,0	1/1:0,13:13:36.08:471,36,0	0/0:15,0:15:18.14:0,18,376	0/0:16,0:15:13.61:0,14,163	0/0:27,0:27:76.44:0,76,861	0/0:27,0:27:78.22:0,78,884	0/0:22,0:22:63.18:0,63,715	1/1:0,35:35:99:1377,102,0	1/1:2,27:29:78.26:1067,78,0	0/0:27,0:27:72.20:0,72,810	0/0:29,0:29:78.22:0,78,884	0/0:23,0:23:69.18:0,69,773	0/0:22,0:22:63.18:0,63,715	0/0:27,0:27:78.22:0,78,884	0/0:40,0:40:99:0,114,1283	1/1:1,26:27:72.24:985,72,0	1/1:0,33:33:96.32:1313,96,0	1/1:0,8:8:21.07:287,21,0	1/1:0,20:20:60.20:820,60,0	1/1:2,28:30:75.24:1007,75,0	1/1:3,20:23:60.20:821,60,0	0/0:28,0:28:81.23:0,81,917	0/0:24,0:24:69.18:0,69,772	0/0:18,0:18:54.11:0,54,598	0/0:20,0:20:60.17:0,60,681	0/0:40,0:40:99:0,108,1209	0/0:27,0:27:72.20:0,72,812	0/0:15,0:15:36.10:0,36,408
chr10	21955271	.	AAC	A	1372.88	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.751;DP=733;FS=2.395;HRun=0;HaplotypeScore=85.7747;InbreedingCoeff=0.9986;MQ=91.29;MQ0=0;MQRankSum=-2.089;QD=41.60;ReadPosRankSum=2.430;VQSLOD=5.3873;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,108,2194	0/0:9,0:9:27.08:0,27,514	0/0:32,0:32:96.33:0,96,1902	0/0:28,0:28:77.29:0,77,1477	0/0:26,0:26:78.25:0,78,1548	0/0:22,0:22:66.23:0,66,1340	0/0:18,0:18:54.19:0,54,1097	0/0:32,0:32:96.32:0,96,1857	0/0:29,0:29:87.26:0,87,1694	0/0:33,0:33:99:0,99,1996	0/0:26,0:26:78.27:0,78,1584	0/0:26,0:26:78.27:0,78,1546	0/0:21,0:21:60.17:0,60,1132	0/0:26,0:26:75.24:0,75,1488	1/1:0,33:33:90.31:1468,90,0	0/0:43,0:43:99:0,129,2534	0/0:24,0:24:72.25:0,72,1441	0/0:13,0:13:36.12:0,36,727	0/0:21,0:21:63.19:0,63,1228	0/0:30,0:30:90.31:0,90,1828	0/0:29,0:29:87.28:0,87,1721	0/0:36,0:36:99:0,108,2184	0/0:23,0:23:69.24:0,69,1401	0/0:19,0:19:57.18:0,57,1121	0/0:34,0:34:99:0,102,2073	0/0:24,0:24:72.25:0,72,1457	0/0:27,0:26:81.28:0,81,1624	0/0:11,0:11:33.11:0,33,670
chr10	21956119	.	AATATATATATATATATACAT	A	250.17	PASS	AC=2;AF=0.071;AN=28;BaseQRankSum=1.953;DP=89;FS=9.108;HRun=0;HaplotypeScore=46.6305;InbreedingCoeff=0.1567;MQ=94.56;MQ0=0;MQRankSum=-1.953;QD=27.80;ReadPosRankSum=2.205;VQSLOD=-0.2074;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:3,0:3:3.01:0,3,160	0/0:1,0:1:3.01:0,3,37	0/0:10,0:8:1.25:0,1,3	0/0:7,0:3:3.48:0,3,84	./.	./.	./.	0/0:8,0:8:6.02:0,6,170	./.	0/0:4,0:4:3.01:0,3,188	./.	./.	./.	./.	1/1:4,5:9:6.02:325,6,0	0/0:4,0:4:3:0,3,25	0/0:7,0:7:6:0,6,119	0/0:2,0:2:3.01:0,3,172	0/0:2,0:2:3.01:0,3,124	./.	./.	./.	./.	./.	./.	0/0:4,0:3:3.01:0,3,45	0/0:2,0:2:6.02:0,6,129	0/0:4,0:4:6.02:0,6,189
chr10	21956166	.	C	CA	1254.80	PASS	AC=22;AF=0.407;AN=54;BaseQRankSum=-0.915;DP=129;FS=18.502;HRun=4;HaplotypeScore=26.2514;InbreedingCoeff=0.7527;MQ=89.87;MQ0=0;MQRankSum=0.266;QD=28.52;ReadPosRankSum=0.378;VQSLOD=1.4635;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,3:3:9.03:115,9,0	0/0:2,0:2:5.75:0,6,30	0/0:6,0:6:11.77:0,12,131	0/0:9,0:7:8.15:0,8,133	0/0:8,0:8:21.04:0,21,229	1/1:0,1:1:3.01:38,3,0	1/1:0,3:3:9.03:115,9,0	0/0:14,0:14:39.33:0,39,185	0/0:4,0:4:11.50:0,12,60	1/1:0,6:6:18.05:217,18,0	1/1:1,7:8:18.06:230,18,0	1/1:0,3:3:9.03:116,9,0	1/1:0,5:5:12.04:155,12,0	1/1:2,3:5:12.04:151,12,0	0/0:8,0:7:18.05:0,18,204	0/0:3,0:3:8.52:0,9,42	0/0:6,0:6:14.08:0,14,93	0/0:3,0:3:5.85:0,6,36	0/0:3,0:3:5.10:0,5,29	0/0:4,0:4:11.53:0,12,60	0/0:1,0:1:2.88:0,3,15	0/0:5,0:5:15.04:0,15,170	1/1:1,3:4:6.02:77,6,0	1/1:0,1:1:3.01:38,3,0	1/1:0,5:5:15.05:194,15,0	0/0:2,0:2:3.01:0,3,34	0/0:7,0:6:21.06:0,21,238	./.
chr10	21956565	.	TGG	T	674.28	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=1.617;DP=551;FS=10.438;HRun=9;HaplotypeScore=86.1958;InbreedingCoeff=0.8791;MQ=74.47;MQ0=0;MQRankSum=-0.117;QD=22.48;ReadPosRankSum=-0.564;VQSLOD=1.9124;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,105,1717	0/0:5,0:11:24.04:0,24,257	0/0:20,0:19:29.95:0,30,448	0/0:13,0:12:26.12:0,26,313	0/0:15,0:21:23.11:0,23,242	0/0:19,0:19:57.19:0,57,929	0/0:12,0:12:30.10:0,30,484	0/0:14,0:29:53.96:0,54,499	0/0:5,0:16:24.04:0,24,232	0/0:20,0:20:60.15:0,60,934	0/0:17,0:17:48.16:0,48,788	0/0:22,0:22:60.20:0,60,984	0/0:22,0:22:54.18:0,54,863	0/0:33,0:33:87.29:0,87,1401	1/1:3,27:30:66.19:769,66,0	0/0:6,0:17:24.04:0,24,256	0/0:6,0:19:24.04:0,24,231	0/0:1,0:8:15.02:0,15,145	0/0:7,0:20:48.09:0,48,515	0/0:10,0:20:33.02:0,33,341	0/0:7,0:9:6.01:0,6,58	0/0:5,0:16:24.03:0,24,228	0/0:21,0:21:51.17:0,51,835	0/0:21,0:21:60.19:0,60,961	0/0:15,0:15:42.11:0,42,639	0/0:30,0:30:78.26:0,78,1251	0/0:22,0:22:63.22:0,63,1029	0/0:9,0:9:27.09:0,27,443
chr10	21957459	.	TC	T	1784.50	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.447;DP=640;FS=6.335;HRun=7;HaplotypeScore=62.8909;InbreedingCoeff=0.9981;MQ=79.76;MQ0=0;MQRankSum=-0.608;QD=24.45;ReadPosRankSum=3.138;VQSLOD=4.1403;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:18:44.98:0,45,542	0/0:16,0:16:45.13:0,45,553	0/0:19,1:20:21.48:0,21,501	0/0:19,0:17:41.89:0,42,449	1/1:1,19:20:51.11:520,51,0	0/0:29,0:29:81.26:0,81,1019	0/0:21,0:21:57.16:0,57,699	0/0:38,0:38:99:0,102,1269	0/0:18,0:18:54.13:0,54,657	0/0:31,0:31:93.22:0,93,1138	0/0:22,0:22:66.15:0,66,776	0/0:18,0:18:54.14:0,54,642	0/0:27,0:27:72.21:0,72,886	0/0:22,0:22:63.17:0,63,757	1/1:3,37:40:99:1071,105,0	0/0:24,0:24:66.18:0,66,794	0/0:28,0:28:78.24:0,78,968	0/0:11,0:11:33.11:0,33,415	0/0:17,0:17:45.13:0,45,554	0/0:27,0:27:75.23:0,75,931	0/0:18,0:18:51.12:0,51,611	1/1:0,13:13:33.07:336,33,0	0/0:27,0:27:81.26:0,81,1018	0/0:20,0:20:60.17:0,60,730	0/0:28,0:28:78.21:0,78,935	0/0:32,0:32:93.26:0,93,1153	0/0:27,0:27:81.26:0,81,1014	0/0:9,0:9:27.09:0,27,339
chr10	21957868	.	CA	C	3215.21	PASS	AB=0.588;AC=11;AF=0.196;AN=56;BaseQRankSum=10.349;DP=640;FS=3.668;HRun=10;HaplotypeScore=69.0464;InbreedingCoeff=0.8334;MQ=73.65;MQ0=0;MQRankSum=1.425;QD=20.10;ReadPosRankSum=0.949;VQSLOD=4.7513;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:42.09:0,42,454	0/0:16,0:16:45.11:0,45,490	0/0:16,0:16:25.30:0,25,261	0/0:15,0:16:24.86:0,25,316	1/1:4,23:27:65.98:573,66,0	0/0:29,1:31:48.80:0,49,725	0/0:10,1:11:4.03:0,4,273	0/0:32,0:32:81.21:0,81,883	0/0:16,0:16:45.12:0,45,498	0/0:22,0:22:51.13:0,51,558	0/0:22,0:22:60.15:0,60,649	0/0:24,0:24:66.17:0,66,722	0/0:27,0:29:62.99:0,63,671	0/0:27,0:27:63.16:0,63,689	1/1:2,22:24:56.99:495,57,0	0/0:33,1:34:70.19:0,70,995	0/0:24,0:24:60.15:0,60,655	0/0:4,0:4:6.02:0,6,66	0/0:23,0:23:56.73:0,57,584	0/0:38,1:39:82.23:0,82,1128	0/0:16,0:16:33.09:0,33,365	1/1:3,28:31:80.97:702,81,0	0/0:4,0:25:56.82:0,57,284	0/0:2,0:7:11.36:0,11,57	0/0:28,2:30:26.10:0,26,744	1/1:3,38:41:99:990,114,0	1/1:4,23:27:59.98:521,60,0	0/1:3,7:10:15.18:112,0,15
chr10	21959460	.	G	GAA	5665.62	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=-9.297;DP=518;FS=3.995;HRun=11;HaplotypeScore=74.7915;InbreedingCoeff=0.8898;MQ=64.25;MQ0=0;MQRankSum=-0.421;QD=26.35;ReadPosRankSum=0.269;VQSLOD=5.0188;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:0,0:22:54.89:0,55,237	0/0:10,0:10:27:0,27,256	1/1:10,0:9:5.09:20,5,0	0/1:7,0:6:10.50:10,0,40	0/0:2,0:23:55.13:0,55,254	1/1:4,19:27:49.63:634,50,0	1/1:0,7:8:15.05:202,15,0	0/0:18,0:19:38.48:0,38,343	0/0:20,0:20:48.06:0,48,465	1/1:7,16:25:53.03:711,53,0	1/1:4,18:23:53.67:742,54,0	1/1:2,9:12:20.56:266,21,0	1/1:5,18:26:54.17:737,54,0	1/1:1,13:14:30.10:434,30,0	0/0:3,0:20:43.90:0,44,190	0/0:22,0:22:53.99:0,54,524	0/0:25,0:26:60.01:0,60,632	0/0:23,0:24:47.78:0,48,448	0/0:16,0:16:32.93:0,33,320	0/0:18,0:17:48.03:0,48,466	0/0:7,0:7:18.01:0,18,175	0/0:3,0:18:38.39:0,38,166	1/1:8,17:25:48.12:671,48,0	1/1:1,17:18:39.13:565,39,0	1/1:1,16:20:53.10:673,53,0	0/0:6,0:24:4.98:0,5,151	0/0:6,0:29:49.34:0,49,214	0/0:0,0:5:13.72:0,14,59
chr10	21960118	.	AAGTAGCT	A	5924.54	PASS	AB=0.511;AC=7;AF=0.125;AN=56;BaseQRankSum=13.206;DP=733;FS=7.280;HRun=0;HaplotypeScore=165.3340;InbreedingCoeff=0.8360;MQ=78.00;MQ0=0;MQRankSum=-13.614;QD=64.40;ReadPosRankSum=2.927;VQSLOD=4.3235;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,22:24:51.17:1263,51,0	0/0:17,0:17:51.18:0,51,2043	0/0:18,0:18:51.17:0,51,1847	0/0:21,0:21:56.96:0,57,2004	0/0:28,0:28:75.26:0,75,2975	0/0:39,0:39:99:0,117,4505	0/0:28,0:28:84.29:0,84,3280	0/0:32,0:32:96.31:0,96,3518	0/0:31,0:31:87.30:0,87,3451	0/0:35,0:35:99:0,105,3975	0/0:30,0:30:90.27:0,90,3487	0/0:29,0:29:84.27:0,84,3232	0/0:31,0:31:93.27:0,93,3363	0/0:18,0:18:54.17:0,54,2040	0/0:39,0:39:99:0,114,4396	0/0:25,0:24:72.22:0,72,2579	0/0:22,0:22:63.22:0,63,2535	0/0:14,0:14:42.14:0,42,1654	0/0:19,0:19:54.19:0,54,2086	0/0:31,0:31:90.31:0,90,3591	0/0:25,0:25:75.26:0,75,3011	0/0:30,0:30:84.27:0,84,3203	0/0:30,0:30:87.30:0,87,3441	0/0:22,0:22:60.21:0,60,2412	0/0:27,0:27:81.28:0,81,3243	0/1:1,21:23:51.95:1640,0,52	1/1:2,35:37:93.23:2389,93,0	1/1:0,8:8:24.08:633,24,0
chr10	21961006	.	TATGC	T	262	PASS	AB=0.902;AC=6;AF=0.107;AN=56;BaseQRankSum=4.497;DP=695;FS=1.606;HRun=0;HaplotypeScore=221.5665;InbreedingCoeff=-0.1283;MQ=55.84;MQ0=2;MQRankSum=-4.959;QD=1.76;ReadPosRankSum=-3.324;VQSLOD=2.3310;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:45.11:0,45,640	0/0:4,2:6:9.02:0,9,139	0/0:26,0:21:58.58:0,59,845	0/0:24,0:21:59.96:0,60,1051	0/0:25,0:25:38.80:0,39,624	0/0:19,10:29:37.62:0,38,568	0/0:34,2:33:33.77:0,34,538	0/1:33,0:33:11.68:12,0,956	0/1:17,5:22:51.68:52,0,427	0/1:30,1:31:59.78:60,0,1311	0/0:15,4:18:23.94:0,24,407	0/0:26,5:31:41.54:0,42,651	0/0:16,0:16:29.97:0,30,451	0/0:42,2:44:13.95:0,14,889	0/1:18,0:18:9.34:9,0,344	0/0:13,7:20:20.93:0,21,302	0/0:28,1:29:44.14:0,44,832	0/1:16,10:25:99:209,0,502	0/1:17,2:18:41.69:42,0,718	0/0:12,3:15:20.80:0,21,336	0/0:48,3:49:70.26:0,70,1087	0/0:25,0:25:20.95:0,21,377	0/0:18,0:18:23.75:0,24,362	0/0:25,7:31:27.05:0,27,440	0/0:21,0:20:17.79:0,18,257	0/0:22,0:22:32.79:0,33,556	0/0:25,0:25:42.11:0,42,613	0/0:1,0:1:3.01:0,3,44
chr10	21961010	.	CGTGT	C	179.04	PASS	AB=1.000;AC=9;AF=0.180;AN=50;BaseQRankSum=1.852;DP=715;FS=0.000;HRun=0;HaplotypeScore=229.7057;InbreedingCoeff=0.3077;MQ=47.75;MQ0=8;MQRankSum=-1.128;QD=1.29;ReadPosRankSum=1.452;VQSLOD=2.4311;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:2.99:0,3,23	0/0:5,0:5:2.99:0,3,23	./.	./.	0/0:25,0:25:3.13:0,3,24	0/0:29,0:29:0.83:0,1,3	0/0:36,0:34:9.78:0,10,70	0/0:35,0:35:38.15:0,38,230	1/1:22,0:22:0.23:4,0,0	0/0:33,0:32:37.32:0,37,456	0/0:19,0:17:9:0,9,98	0/0:31,0:31:4.74:0,5,59	0/0:17,0:17:5.96:0,6,45	0/0:43,0:44:19.11:0,19,234	1/1:10,7:17:15.03:214,15,0	0/0:21,0:21:5.85:0,6,45	0/0:33,0:33:5.30:0,5,19	0/1:26,0:25:41.44:41,0,45	0/1:26,0:25:4.23:4,0,85	0/0:16,0:15:3:0,3,25	0/0:53,0:51:14:0,14,88	0/0:24,0:24:5.96:0,6,47	0/0:20,0:18:0.47:0,0,1	0/0:35,0:34:8.99:0,9,76	0/1:24,0:22:0:0,0,0	1/1:24,0:24:3:28,3,0	0/0:24,0:24:9:0,9,46	./.
chr10	21961023	.	GTGTGTGTGTGTGTGTGTGTGTGTGTCTGTA	G	1138.68	PASS	AB=1.000;AC=5;AF=0.093;AN=54;BaseQRankSum=-0.064;DP=716;FS=3.477;HRun=0;HaplotypeScore=458.3796;InbreedingCoeff=0.6043;MQ=42.45;MQ0=12;MQRankSum=-0.773;QD=15.18;ReadPosRankSum=-2.027;VQSLOD=0.4095;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:15.29:0,15,296	0/0:7,0:7:12.02:0,12,275	0/0:14,0:6:3.01:0,3,68	0/0:19,0:11:6.02:0,6,156	0/0:23,0:23:20.94:0,21,501	0/0:28,0:28:19.55:0,20,756	0/0:38,0:35:22.95:0,23,960	0/0:40,0:40:84.25:0,84,2200	0/0:23,0:23:4.47:0,4,1153	0/0:29,0:28:64.09:0,64,3727	0/0:18,0:16:15.05:0,15,766	0/0:29,0:29:27.04:0,27,1317	0/0:17,0:17:21.50:0,22,945	0/0:43,0:43:50.98:0,51,2819	0/0:19,0:18:30.10:0,30,1524	0/1:23,0:23:3.69:4,0,510	0/0:32,0:32:36.54:0,37,1468	0/0:30,0:29:55.07:0,55,2654	0/0:23,0:22:46.54:0,47,1483	0/0:19,0:18:18.06:0,18,761	0/0:57,0:55:46.38:0,46,1766	0/0:24,0:24:15.05:0,15,653	0/0:18,0:16:9.03:0,9,370	0/0:35,0:34:21.54:0,22,1112	0/0:23,0:21:6.02:0,6,213	1/1:11,13:24:27.06:682,27,0	1/1:12,16:27:10.89:569,11,0	./.
chr10	21961051	.	GTA	G	692.43	PASS	AB=0.986;AC=19;AF=0.339;AN=56;BaseQRankSum=4.677;DP=657;FS=12.987;HRun=0;HaplotypeScore=190.6262;InbreedingCoeff=-0.0078;MQ=45.92;MQ0=12;MQRankSum=-3.200;QD=1.83;ReadPosRankSum=-3.425;VQSLOD=0.4352;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,1:33:28.82:0,29,208	0/0:8,0:8:12.77:0,13,84	0/0:27,0:15:27.53:0,28,623	0/0:25,0:17:21.42:0,21,669	0/1:15,1:16:6.53:7,0,88	0/1:26,0:26:60.36:60,0,105	0/0:36,0:33:18.16:0,18,156	0/1:31,0:30:74.01:74,0,239	0/1:20,1:21:45.46:45,0,89	0/1:26,0:25:14.51:15,0,229	0/0:18,0:17:18.37:0,18,138	0/1:28,0:28:67.34:67,0,91	0/1:13,0:13:8.26:8,0,136	0/1:39,0:39:29.81:30,0,226	0/0:19,0:18:19.25:0,19,180	0/0:21,0:21:20.47:0,20,144	0/1:28,0:28:61.96:62,0,162	0/0:29,0:28:31.40:0,31,384	0/0:16,0:16:20.85:0,21,218	0/0:20,1:20:7.82:0,8,187	0/1:45,1:45:0.14:0,0,227	0/0:23,0:23:23.80:0,24,171	0/1:16,1:17:44.53:45,0,90	0/1:25,0:24:39.83:40,0,105	0/1:23,0:21:12.26:12,0,56	1/1:15,0:15:29.61:204,30,0	1/1:18,0:17:14.42:79,14,0	1/1:7,0:6:17.71:117,18,0
chr10	21962021	.	GA	G	5191.55	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=16.374;DP=763;FS=0.980;HRun=9;HaplotypeScore=90.5373;InbreedingCoeff=0.9915;MQ=75.34;MQ0=0;MQRankSum=-0.188;QD=22.28;ReadPosRankSum=2.718;VQSLOD=5.4059;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,44:45:99:1153,126,0	0/0:14,0:14:39.12:0,39,450	0/0:20,0:19:27.07:0,27,298	0/0:17,1:18:17.53:0,18,419	1/1:7,30:38:86.07:774,86,0	0/0:30,0:31:90.10:0,90,990	0/0:33,0:33:93.25:0,93,1052	0/0:17,0:18:41.94:0,42,448	0/0:26,1:27:41.75:0,42,734	0/0:20,0:20:57.16:0,57,640	0/0:18,0:18:48.13:0,48,546	0/0:29,0:29:81.23:0,81,920	0/0:40,0:40:99:0,99,1122	0/0:34,0:35:93.11:0,93,1052	1/1:5,38:44:92.08:830,92,0	0/0:23,0:23:69.21:0,69,796	0/0:41,0:41:98.96:0,99,1119	0/0:19,0:19:54.14:0,54,612	0/0:27,0:27:66.20:0,66,762	0/0:26,0:26:72.18:0,72,805	0/0:17,0:17:45.12:0,45,508	1/1:5,25:31:77.07:692,77,0	0/0:29,0:29:69.20:0,69,796	0/0:21,0:21:60.15:0,60,672	0/0:24,0:24:66.19:0,66,751	1/1:2,25:27:11.81:617,12,0	1/1:4,37:41:99:933,102,0	1/1:0,7:7:21.01:192,21,0
chr10	21962281	.	CAAA	C	6707.97	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=1.112;DP=652;FS=1.998;HRun=13;HaplotypeScore=115.3365;InbreedingCoeff=0.9569;MQ=70.31;MQ0=1;MQRankSum=-3.608;QD=28.18;ReadPosRankSum=4.528;VQSLOD=4.1371;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:3,0:26:25.42:0,25,75	0/0:10,0:13:39.13:0,39,705	0/0:20,0:18:23.87:0,24,309	0/0:13,1:13:6.77:0,7,142	0/0:38,0:41:99:0,108,1884	1/1:4,23:27:63.11:765,63,0	1/1:4,6:11:17.94:200,18,0	0/0:27,0:31:81.21:0,81,1379	0/0:17,0:20:42.14:0,42,772	1/1:3,26:29:78.21:948,78,0	1/1:1,26:28:69.08:820,69,0	1/1:10,20:30:43.39:710,43,0	1/1:3,14:17:39.07:474,39,0	1/1:3,20:23:53.96:655,54,0	0/0:9,0:26:34.17:0,34,453	0/0:24,0:26:75.19:0,75,1258	0/0:24,0:26:63.19:0,63,1132	0/0:18,0:18:48.16:0,48,832	0/0:23,0:26:69.19:0,69,1125	0/0:24,0:25:72.19:0,72,1278	0/0:5,0:5:12:0,12,176	0/0:19,0:21:54.15:0,54,919	1/1:1,26:27:69.15:822,69,0	1/1:5,15:20:39.08:474,39,0	1/1:2,24:26:69.18:839,69,0	0/0:5,1:36:8.80:0,9,136	0/0:1,0:29:32.83:0,33,76	0/0:2,0:7:6.23:0,6,14
chr10	21964616	.	C	CT	1358.07	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=4.958;DP=652;FS=1.859;HRun=10;HaplotypeScore=84.0104;InbreedingCoeff=0.9344;MQ=77.35;MQ0=0;MQRankSum=0.434;QD=10.95;ReadPosRankSum=0.114;VQSLOD=3.2120;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,2:33:32.76:269,33,0	0/0:10,0:11:29:0,29,228	0/0:17,0:17:17.93:0,18,197	0/0:19,0:20:7.31:0,7,204	0/0:36,1:38:59.72:0,60,680	0/0:18,0:18:38.91:0,39,317	0/0:10,0:13:31.96:0,32,245	0/0:21,0:21:35.91:0,36,295	0/0:16,0:17:49.96:0,50,395	0/0:32,0:33:79.92:0,80,646	0/0:22,0:22:53.89:0,54,440	0/0:23,0:23:56.87:0,57,460	0/0:26,0:26:56.89:0,57,463	0/0:23,0:25:44.43:0,44,433	1/1:7,25:32:13.90:625,14,0	0/0:31,2:33:13.83:0,14,518	0/0:26,0:26:77.75:0,78,619	0/0:12,1:13:6.97:0,7,263	0/0:23,0:24:37.06:0,37,471	0/0:29,0:31:52.61:0,53,600	0/0:24,0:24:53.59:0,54,433	0/0:20,1:21:24.95:0,25,411	0/0:23,0:25:55.70:0,56,449	0/0:25,0:25:70.77:0,71,553	0/0:22,0:22:47.91:0,48,394	1/1:3,0:22:44.46:265,44,0	1/1:4,0:33:62.91:325,63,0	1/1:0,0:4:8.52:43,9,0
chr10	21967939	.	CTTCCATT	C	42750	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=6.642;DP=706;FS=1.662;HRun=0;HaplotypeScore=219.9350;InbreedingCoeff=0.9424;MQ=78.17;MQ0=0;MQRankSum=-12.588;QD=66.69;ReadPosRankSum=8.257;VQSLOD=4.7353;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,33:34:78.27:2100,78,0	1/1:0,8:8:18.06:485,18,0	0/0:34,0:33:92.60:0,93,2896	0/0:31,0:31:90.31:0,90,3465	1/1:1,39:40:90.31:2396,90,0	1/1:1,23:24:54.19:1454,54,0	1/1:2,24:26:69.24:1859,69,0	1/1:5,30:35:90.29:2301,90,0	1/1:0,11:11:30.10:808,30,0	1/1:2,29:31:84.26:2077,84,0	1/1:0,24:24:63.22:1696,63,0	1/1:2,16:18:39.13:1051,39,0	1/1:4,30:34:87.30:2342,87,0	1/1:1,30:31:84.29:2262,84,0	1/1:3,20:23:57.20:1535,57,0	1/1:1,37:38:99:2829,105,0	1/1:2,13:16:36.12:967,36,0	1/1:3,12:15:27.09:727,27,0	1/1:4,15:19:6.73:995,7,0	1/1:1,30:31:84.29:2219,84,0	1/1:1,10:11:30.10:808,30,0	1/1:2,22:24:57.20:1533,57,0	1/1:2,22:24:54.02:1453,54,0	1/1:1,22:23:57.20:1505,57,0	1/1:1,29:30:84.29:2254,84,0	1/1:0,34:34:99:2669,102,0	1/1:4,27:31:75.26:2020,75,0	1/1:2,4:6:15.05:404,15,0
chr10	21970358	.	G	GATC	10103.33	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-14.751;DP=682;FS=1.483;HRun=0;HaplotypeScore=97.1215;InbreedingCoeff=0.9971;MQ=70.80;MQ0=0;MQRankSum=-4.814;QD=51.81;ReadPosRankSum=-1.487;VQSLOD=6.6732;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:45.13:0,45,703	1/1:3,12:15:39.13:866,39,0	0/0:11,0:11:33.07:0,33,468	0/0:8,0:9:18.03:0,18,263	0/0:37,0:37:99:0,105,1611	0/0:30,0:30:87.30:0,87,1425	0/0:25,0:25:69.21:0,69,1058	1/1:5,29:35:99:2030,99,0	1/1:0,21:21:51.18:1138,51,0	0/0:24,0:24:69.22:0,69,1085	0/0:37,0:37:99:0,108,1741	0/0:21,0:21:60.19:0,60,956	0/0:25,0:25:72.25:0,72,1164	0/0:28,0:28:81.26:0,81,1288	0/0:5,0:36:95.82:0,96,806	1/1:3,23:27:63.22:1375,63,0	1/1:2,6:9:18.06:401,18,0	1/1:0,9:9:24.08:536,24,0	1/1:3,14:17:42.14:802,42,0	1/1:5,29:34:81.28:1808,81,0	1/1:4,23:28:54.18:1147,54,0	0/0:31,0:31:90.29:0,90,1385	0/0:30,0:30:84.28:0,84,1336	0/0:21,0:21:60.20:0,60,963	0/0:23,0:23:69.22:0,69,1086	0/0:34,0:34:99:0,102,1640	0/0:28,0:28:81.26:0,81,1279	0/0:22,0:22:45.15:0,45,735
chr10	21970754	.	T	TA	6644.34	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-8.511;DP=806;FS=0.310;HRun=7;HaplotypeScore=161.5064;InbreedingCoeff=0.9980;MQ=68.25;MQ0=0;MQRankSum=-5.195;QD=31.49;ReadPosRankSum=-0.945;VQSLOD=2.3232;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:81.13:0,81,782	1/1:1,15:16:45.14:543,45,0	0/0:8,0:7:17.90:0,18,159	0/0:17,0:16:36.04:0,36,343	0/0:44,0:44:99:0,126,1217	0/0:33,0:33:81.10:0,81,770	0/0:18,0:18:45.07:0,45,435	1/1:7,33:40:96.22:1109,96,0	1/1:1,24:25:72.22:863,72,0	0/0:43,0:43:99:0,126,1218	0/0:28,0:28:72.11:0,72,694	0/0:49,0:49:99:0,126,1216	0/0:39,0:39:99:0,105,1014	0/0:25,0:25:69.11:0,69,666	0/0:7,0:42:73.40:0,73,214	1/1:3,29:32:90.27:1081,90,0	1/1:5,14:18:42.12:495,42,0	1/1:3,12:15:39.12:471,39,0	1/1:3,15:18:48.15:579,48,0	1/1:4,34:38:99:1262,105,0	1/1:1,7:8:21.05:241,21,0	0/0:31,0:31:87.12:0,87,835	0/0:33,0:33:96.14:0,96,921	0/0:31,0:31:78.12:0,78,753	0/0:34,0:34:84.13:0,84,811	0/0:35,0:35:90.14:0,90,875	0/0:31,0:29:81.13:0,81,782	0/0:22,0:22:60.10:0,60,578
chr10	21970799	.	A	AAAAT	53504.58	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-5.805;DP=915;FS=4.402;HRun=0;HaplotypeScore=151.0888;InbreedingCoeff=0.9995;MQ=69.24;MQ0=0;MQRankSum=-9.982;QD=61.22;ReadPosRankSum=4.680;VQSLOD=6.7859;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,34:42:87.30:2193,87,0	1/1:3,10:13:39.12:943,39,0	0/0:19,0:19:46.19:0,46,774	0/0:22,0:21:56.98:0,57,917	1/1:9,37:49:99:2404,108,0	1/1:5,32:38:84.02:2089,84,0	1/1:2,25:27:69.24:1801,69,0	1/1:15,29:43:99:2752,111,0	1/1:5,25:32:81.28:2093,81,0	1/1:6,43:51:99:3538,147,0	1/1:2,18:22:48.16:1216,48,0	1/1:7,50:58:99:3801,148,0	1/1:6,28:37:87.30:2212,87,0	1/1:8,24:32:84.28:2107,84,0	1/1:14,33:47:99:2931,123,0	1/1:9,32:42:99:2565,102,0	1/1:3,16:19:45.11:1093,45,0	1/1:8,5:13:28.34:613,28,0	1/1:8,12:19:48.15:1068,48,0	1/1:6,25:31:87.27:2123,87,0	1/1:5,13:18:48.15:1144,48,0	1/1:8,21:30:66.22:1680,66,0	1/1:4,33:37:99:2568,99,0	1/1:6,33:38:89.91:2295,90,0	1/1:3,37:40:99:2889,114,0	1/1:8,29:38:99:2351,99,0	1/1:8,28:36:78.27:2014,78,0	1/1:3,14:17:39.13:1020,39,0
chr10	21970898	.	G	GAC	14952.58	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-9.131;DP=1215;FS=16.241;HRun=0;HaplotypeScore=180.4994;InbreedingCoeff=0.9656;MQ=56.52;MQ0=33;MQRankSum=-0.173;QD=28.21;ReadPosRankSum=-1.272;VQSLOD=4.6527;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:20,35:55:99:1737,110,0	1/1:4,4:9:24.07:357,24,0	0/0:98,0:16:9.47:0,9,134	0/0:103,0:32:41.26:0,41,442	0/0:35,0:35:66.12:0,66,824	0/0:38,0:38:90.26:0,90,1097	0/0:31,0:32:76:0,76,902	1/1:12,32:44:96.01:1254,96,0	1/1:12,18:30:47.82:720,48,0	0/0:37,0:39:86.48:0,86,1153	0/0:30,0:30:87.26:0,87,1071	0/0:49,0:49:99:0,126,1538	0/0:45,0:45:99:0,123,1523	0/0:46,0:46:99:0,100,1237	1/1:9,44:53:52.58:1399,53,0	1/1:19,33:51:99:1646,101,0	1/1:9,17:26:19.83:808,20,0	1/1:3,24:27:56.22:897,56,0	1/1:16,7:21:3.48:522,3,0	1/1:9,25:34:93.27:1455,93,0	1/1:40,55:93:99:2951,127,0	0/0:31,0:31:57.18:0,57,712	0/0:28,0:27:63.19:0,63,775	0/0:74,0:75:99:0,162,1937	0/0:35,0:35:90.75:0,91,1114	1/1:18,1:28:58.27:539,58,0	1/1:10,1:30:55.74:517,56,0	1/1:11,0:17:12.31:151,12,0
chr10	21970998	.	TAC	T	11495.81	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-0.562;DP=1091;FS=4.682;HRun=0;HaplotypeScore=206.6727;InbreedingCoeff=0.9941;MQ=54.90;MQ0=9;MQRankSum=3.539;QD=29.10;ReadPosRankSum=4.215;VQSLOD=5.3812;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:92.48:0,92,1545	0/0:10,0:10:30.10:0,30,519	0/0:59,0:30:71.72:0,72,1145	0/0:41,0:19:50.96:0,51,808	0/0:29,0:29:11.51:0,12,207	1/1:0,26:25:51.08:679,51,0	1/1:5,36:41:76.56:1108,77,0	0/0:57,0:57:99:0,144,2373	0/0:35,0:35:73.79:0,74,1257	1/1:6,48:54:99:1829,144,0	1/1:1,20:20:42.13:559,42,0	1/1:7,37:44:99:1460,111,0	1/1:3,46:49:98.99:1317,99,0	1/1:5,55:59:99:1629,118,0	0/0:69,0:69:99:0,189,3262	0/0:54,0:54:99:0,138,2296	0/0:25,0:25:50.05:0,50,1042	0/0:14,0:14:39.13:0,39,675	0/0:27,0:26:66.17:0,66,1081	0/0:32,1:33:44.33:0,44,1298	0/0:76,0:75:99:0,196,3223	0/0:33,0:33:20.46:0,20,346	1/1:0,27:27:54.18:719,54,0	1/1:15,33:47:80.14:1277,80,0	1/1:1,24:25:69.23:919,69,0	0/0:38,1:39:71.39:0,71,1795	0/0:34,0:34:82.79:0,83,1364	0/0:25,0:25:75.23:0,75,1240
chr10	21971464	.	GTCGTGGCCCTCC	G	2631.82	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.174;DP=601;FS=6.388;HRun=0;HaplotypeScore=205.0979;InbreedingCoeff=0.9990;MQ=80.50;MQ0=0;MQRankSum=-8.650;QD=61.21;ReadPosRankSum=-0.179;VQSLOD=2.8857;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,14:27:39.11:1256,39,0	0/0:11,0:11:33.11:0,33,1957	0/0:20,0:20:33.11:0,33,1715	0/0:18,0:18:30.10:0,30,1326	0/0:29,0:29:63.22:0,63,3481	0/0:15,0:15:33.11:0,33,1970	0/0:28,0:28:63.22:0,63,3468	0/0:33,0:33:48.16:0,48,2561	0/0:26,0:26:63.22:0,63,3598	0/0:18,0:18:45.15:0,45,2430	0/0:20,0:20:48.16:0,48,2719	0/0:18,0:18:38.87:0,39,2325	0/0:21,0:21:41.88:0,42,2158	0/0:25,0:25:66.23:0,66,3509	1/1:2,14:16:42.14:1497,42,0	0/0:22,0:22:51.17:0,51,2836	0/0:36,0:36:87.30:0,87,5034	0/0:18,0:18:39.13:0,39,2240	0/0:20,0:20:45.15:0,45,2252	0/0:15,0:15:39.13:0,39,2106	0/0:30,0:30:66.23:0,66,3620	0/0:17,0:17:39.61:0,40,2161	0/0:17,0:17:48.15:0,48,2244	0/0:20,0:20:48.16:0,48,2674	0/0:18,0:17:45.15:0,45,2645	0/0:24,0:24:54.19:0,54,2942	0/0:23,0:23:57.20:0,57,3276	0/0:16,0:16:36.12:0,36,2122
chr10	21971539	.	G	GT	12315.34	PASS	AB=0.971;AC=53;AF=0.946;AN=56;BaseQRankSum=-6.591;DP=523;FS=0.000;HRun=7;HaplotypeScore=62.4060;InbreedingCoeff=0.7606;MQ=80.01;MQ0=6;MQRankSum=-5.661;QD=24.98;ReadPosRankSum=3.680;VQSLOD=5.3324;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:28:12.69:371,13,0	1/1:1,5:6:15.05:181,15,0	0/0:29,0:20:23.81:0,24,253	0/1:32,1:20:2.90:3,0,149	1/1:3,18:22:51.03:565,51,0	1/1:3,19:22:51.16:616,51,0	1/1:4,18:22:48.15:580,48,0	1/1:4,21:25:60.09:670,60,0	1/1:4,11:15:24.07:290,24,0	1/1:4,17:21:50.93:541,51,0	1/1:7,15:22:51.15:605,51,0	1/1:2,17:19:39.12:471,39,0	1/1:1,12:14:32.97:377,33,0	1/1:3,10:13:30.09:354,30,0	1/1:0,18:18:45.14:542,45,0	1/1:6,25:31:75.23:906,75,0	1/1:0,19:19:51.13:616,51,0	1/1:2,14:16:36.11:435,36,0	1/1:5,13:18:42.11:481,42,0	1/1:0,10:10:27.04:310,27,0	1/1:1,10:11:30.09:362,30,0	1/1:3,12:15:30.09:362,30,0	1/1:2,12:14:30.09:363,30,0	1/1:0,15:15:42.13:507,42,0	1/1:3,12:15:33.10:399,33,0	1/1:2,17:20:54.12:625,54,0	1/1:9,14:23:48.13:566,48,0	1/1:0,6:6:18.06:217,18,0
chr10	21971639	.	G	GC	8895.64	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-16.828;DP=579;FS=3.445;HRun=4;HaplotypeScore=78.4332;InbreedingCoeff=0.9986;MQ=89.18;MQ0=0;MQRankSum=-2.040;QD=35.73;ReadPosRankSum=2.795;VQSLOD=5.2415;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,111,1245	0/0:13,0:13:39.11:0,39,442	0/0:22,0:23:49.10:0,49,687	0/0:20,0:20:51.03:0,51,534	0/0:31,0:31:87.25:0,87,985	1/1:2,22:24:57.19:780,57,0	1/1:2,10:12:27.09:359,27,0	0/0:37,0:37:96.23:0,96,1050	0/0:28,0:28:78.22:0,78,885	1/1:1,16:17:48.16:652,48,0	1/1:1,20:21:54.18:733,54,0	1/1:0,18:18:45.15:615,45,0	1/1:0,19:19:54.18:738,54,0	1/1:1,23:24:63.21:860,63,0	0/0:22,0:22:63.16:0,63,705	0/0:21,0:21:63.18:0,63,714	0/0:22,0:22:63.14:0,63,700	0/0:15,0:15:42.12:0,42,476	0/0:13,0:13:36.10:0,36,408	0/0:13,0:13:33.08:0,33,364	0/0:24,0:24:63.18:0,63,713	0/0:10,0:10:30.09:0,30,340	1/1:1,14:15:36.12:484,36,0	1/1:1,25:26:69.23:944,69,0	1/1:0,21:20:63.21:862,63,0	1/1:0,26:26:78.24:1049,78,0	1/1:2,18:20:42.14:574,42,0	1/1:0,6:6:18.06:246,18,0
chr10	21972045	.	CT	C	18424.49	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=11.210;DP=639;FS=0.830;HRun=2;HaplotypeScore=147.0859;InbreedingCoeff=0.9996;MQ=88.22;MQ0=0;MQRankSum=-7.970;QD=34.44;ReadPosRankSum=4.029;VQSLOD=4.2782;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:99:0,99,1483	1/1:0,13:13:33.11:428,33,0	0/0:30,0:30:69.72:0,70,1123	0/0:19,0:19:49.40:0,49,657	1/1:0,28:28:75.21:956,75,0	1/1:0,20:20:60.20:779,60,0	1/1:0,21:21:60.20:779,60,0	1/1:2,27:29:78.23:984,78,0	1/1:1,21:22:54.14:682,54,0	1/1:0,29:29:87.26:1103,87,0	1/1:0,19:19:51.17:661,51,0	1/1:0,19:19:45.15:584,45,0	1/1:0,24:24:57.18:733,57,0	1/1:0,22:22:57.19:739,57,0	0/0:22,0:22:66.20:0,66,949	1/1:0,27:27:75.24:973,75,0	1/1:1,31:32:84.27:1090,84,0	1/1:0,34:34:81.26:1051,81,0	1/1:0,13:13:39.07:461,39,0	1/1:0,24:24:72.23:934,72,0	1/1:0,11:11:27.08:350,27,0	1/1:1,14:15:39.13:506,39,0	1/1:0,24:24:56.94:738,57,0	1/1:0,17:17:39.13:506,39,0	1/1:1,28:29:78.25:1012,78,0	1/1:1,29:30:87.28:1128,87,0	1/1:1,16:17:48.16:623,48,0	1/1:0,16:16:48.16:623,48,0
chr10	21972276	.	CGATT	C	20085.12	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=1.715;DP=721;FS=0.826;HRun=0;HaplotypeScore=137.4740;InbreedingCoeff=0.9881;MQ=68.88;MQ0=1;MQRankSum=-1.062;QD=30.07;ReadPosRankSum=6.418;VQSLOD=4.4840;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:12,20:33:51.17:823,51,0	1/1:5,8:13:20.10:338,20,0	0/0:28,0:27:28.37:0,28,423	0/0:25,0:25:35.28:0,35,624	1/1:6,26:32:72.18:1130,72,0	1/1:8,22:30:72.14:1104,72,0	1/1:2,14:16:35.92:490,36,0	1/1:30,19:49:57.17:859,57,0	1/1:6,22:28:54.18:872,54,0	1/1:11,15:26:60.20:969,60,0	1/1:6,13:19:33.11:533,33,0	1/1:8,13:21:45.10:697,45,0	1/1:9,18:27:63.20:994,63,0	1/1:12,17:29:57.19:921,57,0	1/1:10,28:38:75.25:1211,75,0	1/1:6,27:33:66.22:1066,66,0	1/1:4,17:21:39.13:630,39,0	1/1:5,18:23:43.03:680,43,0	1/1:13,6:19:18.03:244,18,0	1/1:6,16:23:45.02:665,45,0	1/1:11,15:26:33.11:533,33,0	1/1:8,22:30:60.20:969,60,0	1/1:15,11:26:45.15:719,45,0	1/1:6,5:11:17.98:259,18,0	1/1:4,15:19:48.16:774,48,0	1/1:7,24:31:75.19:1113,75,0	1/1:5,23:28:60.20:961,60,0	1/1:2,15:17:33.11:533,33,0
chr10	21972356	.	TGATCTCTA	T	14201.54	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=13.137;DP=704;FS=1.842;HRun=0;HaplotypeScore=234.4179;InbreedingCoeff=0.9923;MQ=82.22;MQ0=0;MQRankSum=-17.808;QD=66.05;ReadPosRankSum=2.049;VQSLOD=4.8252;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:90.29:0,90,3820	0/0:8,0:8:21.07:0,21,931	0/0:29,0:29:78.25:0,78,2828	0/0:23,0:23:56.38:0,56,2327	0/0:31,0:31:69.20:0,69,2837	1/1:5,29:34:87.30:2321,87,0	1/1:1,20:21:54.19:1499,54,0	0/0:39,0:39:99:0,105,4548	0/0:27,0:27:75.26:0,75,3077	1/1:4,20:24:60.18:1634,60,0	1/1:2,6:8:15.05:424,15,0	1/1:1,18:19:48.16:1356,48,0	1/1:6,24:30:57.20:1611,57,0	1/1:6,33:39:99:2619,99,0	0/0:41,0:41:99:0,108,4617	0/0:39,0:39:99:0,108,4668	0/0:27,0:27:81.25:0,81,3434	0/0:17,0:17:39.12:0,39,1558	0/0:18,0:18:54.19:0,54,2360	0/0:24,0:24:72.17:0,72,2860	0/0:36,0:36:93.27:0,93,3795	0/0:16,0:16:33.11:0,33,1390	1/1:0,13:13:36.12:1017,36,0	1/1:2,6:8:12.04:339,12,0	1/1:1,18:19:51.16:1381,51,0	0/0:30,0:30:90.31:0,90,3956	0/0:38,0:38:99:0,114,4949	0/0:12,0:12:33.11:0,33,1461
chr10	21972664	.	A	ATGTGTGTGTGTG	2830.89	PASS	AB=1.000;AC=32;AF=0.615;AN=52;BaseQRankSum=1.597;DP=651;FS=3.542;HRun=0;HaplotypeScore=202.9864;InbreedingCoeff=0.4848;MQ=57.91;MQ0=8;MQRankSum=-2.016;QD=7.08;ReadPosRankSum=-0.004;VQSLOD=2.6978;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:29:14.70:176,15,0	0/0:10,0:10:18.06:0,18,566	./.	./.	1/1:28,0:28:17.55:153,18,0	1/1:24,0:24:18.04:329,18,0	1/1:8,0:21:4.41:43,4,0	0/1:39,0:40:13.59:14,0,423	0/0:18,0:18:32.84:0,33,707	1/1:7,0:21:26.78:456,27,0	1/1:18,0:18:12.03:231,12,0	1/1:7,0:18:9.83:312,10,0	1/1:3,0:20:9.50:304,10,0	0/0:5,0:14:1.25:0,1,3	0/0:13,0:38:7.79:0,8,58	0/0:13,0:17:23.56:0,24,469	0/0:33,0:33:6.81:0,7,1134	0/1:11,0:13:2.90:3,0,305	0/1:19,0:19:24.40:24,0,254	0/0:28,0:31:18.01:0,18,970	0/0:29,0:29:19.06:0,19,791	1/1:20,0:20:17.77:289,18,0	1/1:7,11:20:3.01:175,3,0	1/1:18,0:18:2.99:24,3,0	1/1:7,0:27:3.01:36,3,0	0/1:28,0:28:17.84:253,0,18	1/1:15,0:15:4.70:158,5,0	1/1:19,0:19:3:28,3,0
chr10	21972695	.	T	TGTGTGA	2650.31	PASS	AB=0.997;AC=21;AF=0.375;AN=56;BaseQRankSum=5.218;DP=587;FS=9.794;HRun=0;HaplotypeScore=133.5884;InbreedingCoeff=0.0658;MQ=62.88;MQ0=8;MQRankSum=-2.131;QD=8.75;ReadPosRankSum=-1.141;VQSLOD=1.3994;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:27:61.16:68,0,61	0/0:12,0:12:32.89:0,33,525	0/0:27,0:17:35.23:0,35,389	0/0:44,0:24:53.22:0,53,593	0/1:23,0:23:74.36:193,0,74	0/1:20,0:20:33.89:59,0,34	0/0:18,0:18:10.14:0,10,116	0/0:36,0:36:62.16:0,62,1095	0/0:19,0:19:50.81:0,51,767	0/1:17,0:16:72.84:102,0,73	0/1:11,0:11:49.97:69,0,50	0/1:17,0:16:99:153,0,122	0/1:18,0:18:78.65:174,0,79	0/1:12,0:12:13.86:14,0,80	0/1:29,0:30:97.61:98,0,191	0/0:12,0:12:35.65:0,36,507	0/0:33,0:33:65.05:0,65,1457	0/0:11,0:11:12.14:0,12,393	0/0:19,0:16:46.79:0,47,527	0/0:23,0:23:54.09:0,54,979	0/0:30,0:28:59.92:0,60,958	0/1:20,0:20:66.77:67,0,161	1/1:5,0:5:3.01:60,3,0	0/1:19,0:19:2.99:3,0,122	1/1:16,0:16:0.47:1,0,0	1/1:10,2:34:56.88:976,57,0	1/1:0,20:23:21:676,21,0	1/1:0,7:10:3.01:109,3,0
chr10	21973904	.	C	CCGAAGA	18765.25	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-15.817;DP=720;FS=11.233;HRun=0;HaplotypeScore=176.6062;InbreedingCoeff=0.9965;MQ=73.67;MQ0=0;MQRankSum=-16.275;QD=62.97;ReadPosRankSum=-1.366;VQSLOD=4.2841;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:17,26:46:78.22:2494,78,0	1/1:3,8:11:24.08:824,24,0	0/0:19,0:19:36.12:0,36,783	0/0:18,0:18:36.05:0,36,620	0/0:29,0:29:72.25:0,72,1583	0/0:26,0:26:72.25:0,72,1617	0/0:33,0:33:87.30:0,87,1927	1/1:22,20:44:93.28:2648,93,0	1/1:10,17:27:63.22:2124,63,0	0/0:25,0:25:69.24:0,69,1531	0/0:21,0:21:54.19:0,54,1209	0/0:28,0:28:60.21:0,60,1347	0/0:32,0:32:84.29:0,84,1881	0/0:25,0:25:63.22:0,63,1398	1/1:8,23:33:63.22:2161,63,0	1/1:7,27:35:81.28:2778,81,0	1/1:7,10:17:24.08:824,24,0	1/1:4,7:11:15.05:516,15,0	1/1:9,13:23:51.15:1525,51,0	1/1:10,13:23:48.13:1500,48,0	1/1:12,14:28:48.12:1371,48,0	0/0:11,0:11:30.10:0,30,643	0/0:21,0:21:54.17:0,54,1070	0/0:43,0:43:99:0,120,2604	0/0:24,0:24:69.24:0,69,1533	0/0:35,0:34:81.26:0,81,1763	0/0:25,0:25:63.20:0,63,1354	0/0:7,0:7:21.07:0,21,472
chr10	21974405	.	AT	A	7243.54	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-8.299;DP=539;FS=1.521;HRun=8;HaplotypeScore=69.3006;InbreedingCoeff=0.9970;MQ=71.75;MQ0=0;MQRankSum=-2.210;QD=23.83;ReadPosRankSum=2.322;VQSLOD=5.6324;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:72.18:0,72,853	0/0:0,0:7:18.82:0,19,87	0/0:15,0:13:29.39:0,29,296	0/0:12,0:12:26.95:0,27,296	1/1:3,24:27:66.10:637,66,0	1/1:6,17:23:48.07:464,48,0	1/1:1,14:15:39.06:377,39,0	0/0:4,0:41:98.85:0,99,494	0/0:1,0:11:23.13:0,23,129	1/1:5,25:30:75.10:718,75,0	1/1:1,15:16:45.07:434,45,0	1/1:2,22:24:60.10:579,60,0	1/1:0,15:15:45.07:434,45,0	1/1:2,14:16:39.06:377,39,0	0/0:22,0:22:63.18:0,63,748	0/0:3,0:21:53.99:0,54,280	0/0:1,0:14:40.25:0,40,205	0/0:0,0:23:62.56:0,63,314	0/0:4,0:14:27.23:0,27,157	0/0:3,0:20:43.12:0,43,225	0/0:1,0:6:17.37:0,17,97	1/1:0,13:14:33.04:318,33,0	1/1:1,19:20:54.09:521,54,0	1/1:2,14:16:36.05:348,36,0	1/1:4,17:21:44.99:423,45,0	1/1:4,15:19:45.04:427,45,0	1/1:3,26:29:72.11:695,72,0	1/1:1,18:19:51.08:493,51,0
chr10	21974677	.	CT	C	15589.30	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=22.854;DP=843;FS=9.837;HRun=2;HaplotypeScore=145.7826;InbreedingCoeff=0.9994;MQ=90.86;MQ0=0;MQRankSum=-6.739;QD=36.09;ReadPosRankSum=4.575;VQSLOD=2.9905;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:57:99:0,166,2457	0/0:15,0:15:45.15:0,45,675	0/0:37,0:37:96.29:0,96,1393	0/0:31,0:31:83.64:0,84,1213	1/1:0,29:29:75.24:973,75,0	1/1:0,23:23:66.21:857,66,0	1/1:0,35:35:93.30:1207,93,0	0/0:34,0:34:99:0,99,1427	0/0:30,0:30:90.30:0,90,1344	1/1:1,39:40:94.47:1490,94,0	1/1:0,12:12:36.12:467,36,0	1/1:0,29:29:84.27:1091,84,0	1/1:0,42:42:99:1558,120,0	1/1:0,48:48:99:1753,135,0	0/0:42,0:42:99:0,126,1878	0/0:38,0:37:99:0,114,1686	0/0:30,0:30:90.30:0,90,1349	0/0:18,0:18:51.09:0,51,706	0/0:28,0:28:84.24:0,84,1181	0/0:20,0:20:54.17:0,54,784	0/0:31,0:31:93.30:0,93,1372	1/1:0,25:25:66.21:857,66,0	1/1:0,18:18:45.12:584,45,0	1/1:0,22:22:63.20:818,63,0	1/1:0,24:24:72.23:934,72,0	1/1:1,36:37:99:1402,108,0	1/1:0,38:38:99:1324,102,0	1/1:0,10:10:21.07:273,21,0
chr10	21974884	.	TC	T	11382.23	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=9.755;DP=693;FS=6.193;HRun=1;HaplotypeScore=73.4298;InbreedingCoeff=0.9963;MQ=84.73;MQ0=0;MQRankSum=-1.651;QD=39.52;ReadPosRankSum=1.269;VQSLOD=5.5005;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,39:39:99:1594,114,0	1/1:0,10:10:30.10:419,30,0	0/0:23,0:23:39.95:0,40,908	0/0:19,0:19:27.35:0,27,608	0/0:17,0:17:48.16:0,48,767	0/0:14,0:14:42.14:0,42,672	0/0:41,0:41:99:0,123,1964	1/1:0,27:27:78.25:1073,78,0	1/1:0,25:25:72.24:1006,72,0	0/0:23,0:23:66.21:0,66,1032	0/0:5,0:5:15.05:0,15,240	0/0:36,0:36:99:0,108,1658	0/0:34,0:34:99:0,102,1600	0/0:48,0:48:99:0,144,2299	1/1:0,36:36:99:1385,99,0	1/1:0,28:28:78.26:1091,78,0	1/1:0,38:38:99:1468,105,0	1/1:0,12:12:33.11:461,33,0	1/1:1,22:23:66.22:921,66,0	1/1:0,16:16:45.15:621,45,0	1/1:1,33:34:96.32:1342,96,0	0/0:14,0:14:39.13:0,39,621	0/0:16,0:16:45.15:0,45,719	0/0:31,0:31:93.30:0,93,1464	0/0:21,0:21:63.21:0,63,1007	0/0:26,0:26:78.27:0,78,1244	0/0:31,0:31:93.30:0,93,1456	0/0:6,0:6:18.06:0,18,287
chr10	21975838	.	GA	G	846.52	PASS	AB=0.643;AC=5;AF=0.089;AN=56;BaseQRankSum=1.426;DP=556;FS=28.083;HRun=9;HaplotypeScore=76.6109;InbreedingCoeff=0.7685;MQ=76.01;MQ0=0;MQRankSum=-1.716;QD=14.35;ReadPosRankSum=2.343;VQSLOD=1.9775;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:65.95:0,66,712	0/0:8,0:8:18:0,18,193	0/0:15,0:13:19.01:0,19,270	0/0:21,0:22:35.31:0,35,423	0/0:20,0:20:27.08:0,27,312	0/0:14,0:14:36.03:0,36,390	0/0:30,0:30:81.11:0,81,868	0/0:27,0:27:59.91:0,60,641	0/0:13,0:13:35.96:0,36,356	0/0:15,0:15:33.09:0,33,374	0/0:17,0:17:39.07:0,39,435	0/0:14,0:14:30.04:0,30,301	0/0:21,0:21:50.93:0,51,519	0/0:14,0:14:32.95:0,33,352	0/0:23,0:23:63.13:0,63,677	0/0:25,0:25:63.16:0,63,701	0/0:50,0:50:99:0,150,1579	0/0:22,0:22:63.14:0,63,690	0/0:18,0:18:35.91:0,36,381	0/0:13,0:13:30.09:0,30,342	0/0:17,0:17:44.67:0,45,450	0/0:14,0:14:29.88:0,30,311	0/0:19,1:20:20.61:0,21,467	0/0:19,0:18:57.10:0,57,609	0/0:22,0:22:61.19:0,61,638	0/1:8,10:18:56.03:235,0,56	1/1:10,21:31:63:575,63,0	1/1:3,7:10:18.01:164,18,0
chr10	21976089	.	CTTT	C	6796.95	PASS	AB=0.707;AC=40;AF=0.714;AN=56;BaseQRankSum=-3.214;DP=614;FS=16.344;HRun=16;HaplotypeScore=107.9784;InbreedingCoeff=0.4719;MQ=68.77;MQ0=2;MQRankSum=-0.469;QD=14.19;ReadPosRankSum=6.298;VQSLOD=1.6464;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:39:95.77:0,96,790	1/1:6,5:12:18.71:198,19,0	0/0:26,0:20:6.40:0,6,169	0/1:14,0:11:8.51:9,0,78	0/1:9,1:18:7.88:8,0,110	1/1:5,14:19:38.93:407,39,0	1/1:6,13:19:32.95:353,33,0	1/1:10,10:20:25.58:235,26,0	0/1:8,9:17:17.16:254,0,17	1/1:2,16:19:31.21:343,31,0	1/1:8,13:25:8.29:409,8,0	1/1:9,8:19:8.95:307,9,0	1/1:10,11:21:32.65:353,33,0	0/1:8,4:13:3.26:177,0,3	0/1:9,2:28:28.68:29,0,120	1/1:7,16:23:47.83:508,48,0	1/1:14,14:29:29.54:319,30,0	1/1:7,12:21:35.76:358,36,0	1/1:8,14:24:44.62:442,45,0	1/1:9,19:29:61.13:661,61,0	1/1:4,7:12:14.87:188,15,0	0/1:9,1:18:30.50:31,0,74	1/1:9,13:25:9.27:295,9,0	1/1:6,26:32:59.66:645,60,0	1/1:9,11:21:9.03:268,9,0	0/0:11,0:18:38.91:0,39,362	0/0:27,0:36:81.08:0,81,747	0/0:4,0:15:35.88:0,36,304
chr10	21976103	.	TTTG	T	1867.69	PASS	AB=0.958;AC=23;AF=0.411;AN=56;BaseQRankSum=10.715;DP=615;FS=12.854;HRun=0;HaplotypeScore=123.8836;InbreedingCoeff=-0.2559;MQ=76.58;MQ0=2;MQRankSum=-3.004;QD=4.67;ReadPosRankSum=11.416;VQSLOD=-0.2738;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,114,1128	0/1:11,0:11:28.13:71,0,28	0/0:30,0:24:58.13:0,58,504	0/1:22,1:17:35.22:35,0,201	0/0:20,0:20:36.46:0,36,356	0/1:19,1:20:61.03:140,0,61	1/1:17,0:17:4.18:74,4,0	0/1:15,0:15:24.64:25,0,98	0/1:21,2:23:99:108,0,146	0/1:23,0:23:36.96:37,0,148	0/1:27,1:28:98.88:99,0,135	1/1:13,3:16:4.73:121,5,0	0/1:14,2:16:13.23:111,0,13	0/1:9,2:11:58.97:103,0,59	0/0:31,0:31:43.02:0,43,324	0/1:19,3:22:29.98:221,0,30	0/1:17,1:18:26.63:122,0,27	0/1:19,0:19:48.12:63,0,48	0/1:19,0:19:40.11:106,0,40	0/1:26,2:28:0.64:254,0,1	0/1:12,0:12:40.62:41,0,53	0/0:18,0:18:22.39:0,22,208	0/1:30,0:30:34.96:35,0,249	1/1:28,1:29:28.71:192,29,0	0/1:20,0:20:80.75:81,0,155	0/0:20,0:20:48.06:0,48,517	0/0:34,0:34:31.30:0,31,477	0/0:16,0:16:44.72:0,45,432
chr10	21976473	.	A	ATG	21293.66	PASS	AB=0.613;AC=37;AF=0.661;AN=56;BaseQRankSum=-2.320;DP=1053;FS=4.775;HRun=0;HaplotypeScore=199.0508;InbreedingCoeff=0.2992;MQ=57.46;MQ0=19;MQRankSum=4.285;QD=25.75;ReadPosRankSum=4.232;VQSLOD=5.5592;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,51:66:11.87:1758,12,0	1/1:3,5:8:15.05:246,15,0	0/0:85,0:28:49.76:0,50,567	0/0:68,0:36:56.35:0,56,634	0/1:6,15:22:1.07:505,0,1	1/1:3,20:23:16.99:799,17,0	0/1:14,24:38:53.81:730,0,54	1/1:19,27:46:20.01:1123,20,0	1/1:10,33:44:13.44:1253,13,0	1/1:8,24:34:42.53:1090,43,0	1/1:6,24:30:32.16:1043,32,0	1/1:10,32:42:4.15:1107,4,0	1/1:9,28:37:23:897,23,0	0/1:14,33:47:61.47:958,0,61	1/1:6,32:39:41.07:1193,41,0	0/1:13,13:26:99:404,0,109	0/1:11,17:28:80.38:629,0,80	0/1:9,8:17:4.60:390,0,5	1/1:7,10:18:30.10:479,30,0	0/1:14,18:33:60.01:625,0,60	1/1:23,71:93:51.38:2211,51,0	0/1:6,32:38:18.17:1284,0,18	1/1:4,23:27:54.18:882,54,0	1/1:12,37:48:77.87:1278,78,0	0/1:6,13:19:41.21:410,0,41	0/0:25,0:27:71.87:0,72,834	0/0:28,0:28:69.11:0,69,811	0/0:18,0:18:39.09:0,39,458
chr10	21977219	.	GAAGGAAGGAAGGAAGAAAGAAAGA	G	7388.85	PASS	AB=0.951;AC=13;AF=0.232;AN=56;BaseQRankSum=3.614;DP=676;FS=9.968;HRun=0;HaplotypeScore=463.3467;InbreedingCoeff=0.0699;MQ=48.66;MQ0=14;MQRankSum=-7.206;QD=34.69;ReadPosRankSum=0.554;VQSLOD=1.1314;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:24:46.95:47,0,356	0/1:7,0:7:99:649,0,101	0/0:6,0:3:9.03:0,9,294	0/0:5,0:3:9.03:0,9,322	0/0:42,0:42:99:0,109,3110	0/0:30,0:28:78.27:0,78,4621	0/0:28,0:21:57.19:0,57,1952	1/1:6,34:37:98.96:1559,99,0	0/1:23,0:22:99:531,0,403	0/0:30,0:28:79.30:0,79,4576	0/0:30,0:28:78.27:0,78,3823	0/0:34,0:34:93.16:0,93,4965	0/0:34,0:34:99:0,102,5191	0/0:32,0:32:78.21:0,78,3904	0/1:19,0:19:99:647,0,584	0/1:22,0:21:99:1150,0,610	0/1:18,0:17:99:240,0,234	0/1:13,0:14:99:229,0,172	0/1:7,10:16:57.64:1064,0,58	0/1:23,0:22:99:1068,0,640	1/1:6,0:6:8.85:205,9,0	0/0:28,0:28:74.61:0,75,1551	0/0:20,0:19:45.07:0,45,2767	0/0:21,0:20:42.91:0,43,1872	0/0:29,0:28:72.18:0,72,4086	0/0:39,0:39:99:0,114,8721	0/0:35,0:35:99:0,105,8078	0/0:20,0:20:60.21:0,60,4564
chr10	21977227	.	GAAGGAAGA	G	4911.83	PASS	AB=1.000;AC=25;AF=0.446;AN=56;BaseQRankSum=2.087;DP=685;FS=5.836;HRun=0;HaplotypeScore=269.0863;InbreedingCoeff=-0.0746;MQ=50.39;MQ0=14;MQRankSum=1.530;QD=9.98;ReadPosRankSum=-2.038;VQSLOD=2.6251;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:21,0:21:28.16:28,0,56	1/1:7,0:7:2.04:253,2,0	0/0:11,0:6:14.97:0,15,128	0/0:7,0:5:14.98:0,15,142	1/1:6,35:41:89.06:1153,89,0	0/1:31,0:29:1.53:2,0,592	0/1:29,0:22:99:159,0,145	1/1:37,0:34:50.82:293,51,0	0/1:23,0:22:87.83:229,0,88	0/1:32,0:30:35.15:35,0,679	0/0:29,0:27:20.98:0,21,615	0/1:33,0:33:47.97:48,0,800	0/1:34,0:34:65.06:65,0,924	0/0:30,0:30:9.92:0,10,633	0/1:22,0:22:58.40:475,0,58	0/1:22,0:21:81.71:535,0,82	0/1:20,0:19:52.65:151,0,53	0/1:14,0:14:45.09:45,0,58	0/1:16,0:15:0.67:264,0,1	0/1:24,0:23:87.47:387,0,87	1/1:9,0:9:8.18:70,8,0	1/1:2,25:27:46.88:617,47,0	0/0:17,0:16:11.48:0,11,575	0/1:20,0:20:15.05:15,0,240	0/1:29,0:28:87.86:88,0,655	0/0:42,0:42:99:0,123,2691	0/0:37,0:37:99:0,111,2532	0/0:20,0:20:57.13:0,57,1359
chr10	21977231	.	GAAGAAAGAAAGA	G	6942.80	PASS	AB=0.805;AC=17;AF=0.304;AN=56;BaseQRankSum=8.137;DP=678;FS=1.365;HRun=0;HaplotypeScore=306.9474;InbreedingCoeff=0.3308;MQ=51.13;MQ0=14;MQRankSum=-7.409;QD=27.77;ReadPosRankSum=-1.135;VQSLOD=3.6003;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,16:21:6.02:93,6,0	1/1:2,5:7:2.16:573,2,0	0/0:12,0:7:20.86:0,21,424	0/0:7,0:5:15.05:0,15,458	0/1:36,0:36:19.69:20,0,308	0/0:33,0:31:81.15:0,81,1956	0/0:28,0:21:39.06:0,39,732	1/1:37,0:34:54.12:938,54,0	0/1:9,15:23:63.67:502,0,64	0/0:31,0:29:69.04:0,69,1994	0/0:28,0:26:57.15:0,57,1520	0/0:33,0:33:79.66:0,80,2018	0/0:33,0:33:81.19:0,81,2162	0/0:29,0:29:41.97:0,42,1316	0/1:18,6:24:55.21:1232,0,55	0/1:16,7:22:30.25:1249,0,30	0/1:16,1:16:55.50:359,0,56	0/1:7,6:13:99:107,0,114	1/1:14,1:14:33.07:798,33,0	0/1:19,5:23:5.90:967,0,6	1/1:1,8:9:3.01:105,3,0	0/0:26,0:26:22.81:0,23,177	0/0:17,0:16:33.11:0,33,1140	0/0:22,0:21:36.53:0,37,952	0/0:30,0:29:69.15:0,69,1815	0/0:41,0:41:99:0,117,5121	0/0:38,0:38:93.32:0,93,4144	0/0:20,0:20:60.21:0,60,2622
chr10	21977238	.	GAAAGA	G	1519.88	PASS	AB=0.960;AC=14;AF=0.250;AN=56;BaseQRankSum=12.232;DP=659;FS=1.381;HRun=0;HaplotypeScore=229.5661;InbreedingCoeff=0.2378;MQ=56.38;MQ0=10;MQRankSum=-8.286;QD=7.45;ReadPosRankSum=0.809;VQSLOD=2.6608;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:18,0:18:9.43:9,0,10	0/1:8,0:8:1.45:167,0,1	0/0:17,0:12:33.11:0,33,645	0/0:16,0:14:35.48:0,35,682	0/0:37,0:37:36.92:0,37,487	0/0:31,0:29:83.35:0,83,938	0/0:22,0:15:38.28:0,38,321	1/1:35,0:34:25.53:119,26,0	0/1:18,0:18:24.39:149,0,24	0/0:30,0:28:76.90:0,77,986	0/0:24,0:22:62.70:0,63,779	0/0:34,0:34:91.94:0,92,1064	0/0:31,0:31:92.50:0,92,1286	0/0:23,0:23:47.62:0,48,605	0/1:22,2:24:49.04:322,0,49	0/1:21,3:24:99:375,0,100	0/1:16,0:15:76.03:108,0,76	0/1:12,0:12:25.85:26,0,136	1/1:13,0:12:6.51:147,7,0	0/1:23,1:25:68.58:225,0,69	1/1:9,0:9:2.52:34,3,0	0/0:26,0:26:17.56:0,18,213	0/0:17,0:16:41.88:0,42,638	0/0:18,0:18:44.31:0,44,576	0/0:33,0:32:83.25:0,83,1006	0/0:41,0:41:99:0,123,3150	0/0:35,0:35:99:0,102,2643	0/0:20,0:20:58.08:0,58,1557
chr10	21977692	.	GA	G	4240.43	PASS	AB=0.818;AC=21;AF=0.375;AN=56;BaseQRankSum=12.065;DP=561;FS=5.386;HRun=10;HaplotypeScore=55.4569;InbreedingCoeff=0.9323;MQ=75.85;MQ0=0;MQRankSum=0.189;QD=19.45;ReadPosRankSum=2.531;VQSLOD=5.8968;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:45.19:0,45,584	0/0:7,0:7:18.05:0,18,199	0/0:19,0:18:8.60:0,9,221	0/1:7,2:8:0.49:0,0,82	0/0:33,2:35:64.15:0,64,910	1/1:2,25:27:71.98:625,72,0	1/1:2,22:24:50.98:443,51,0	0/0:28,0:28:69.12:0,69,728	0/0:15,0:15:30.07:0,30,324	1/1:2,19:21:56.98:492,57,0	1/1:3,19:22:17.79:383,18,0	1/1:3,14:17:41.99:365,42,0	1/1:2,24:26:65.98:573,66,0	1/1:0,17:17:38.99:339,39,0	0/0:20,0:20:54.15:0,54,597	0/0:21,0:21:60.16:0,60,664	0/0:14,1:16:6.11:0,6,333	0/0:11,0:12:23.90:0,24,245	0/0:20,0:21:59.98:0,60,636	0/0:23,1:24:34.06:0,34,589	0/0:11,0:11:30.08:0,30,332	0/0:20,1:22:30.93:0,31,552	1/1:1,14:15:35.99:313,36,0	1/1:4,14:19:38.03:319,38,0	1/1:4,17:21:44.96:391,45,0	0/0:21,0:21:49.95:0,50,536	0/0:34,1:35:52.15:0,52,801	0/0:14,0:14:42.06:0,42,437
chr10	21977991	.	T	TG	8069.23	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-14.718;DP=701;FS=7.383;HRun=6;HaplotypeScore=73.0409;InbreedingCoeff=0.9985;MQ=86.32;MQ0=0;MQRankSum=-1.924;QD=31.16;ReadPosRankSum=-0.415;VQSLOD=5.0641;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,21:24:32.59:723,33,0	1/1:2,13:15:35.78:450,36,0	0/0:24,0:24:51.04:0,51,487	0/0:25,0:25:24.30:0,24,371	0/0:33,0:33:96.20:0,96,970	0/0:33,0:33:92.28:0,92,936	0/0:24,0:24:63.14:0,63,643	1/1:4,20:24:57.17:703,57,0	1/1:1,22:23:63.20:789,63,0	0/0:33,0:33:93.17:0,93,933	0/0:25,0:25:64.13:0,64,695	0/0:31,0:31:87.15:0,87,872	0/0:27,0:27:78.14:0,78,781	0/0:22,0:22:63.09:0,63,626	1/1:0,41:41:99:1358,108,0	1/1:1,21:22:54.17:679,54,0	1/1:2,16:18:42.13:528,42,0	1/1:2,14:16:42.13:528,42,0	1/1:2,21:23:35.54:727,36,0	1/1:2,27:29:78.25:980,78,0	1/1:4,20:24:48.15:604,48,0	0/0:30,0:30:87.17:0,87,874	0/0:24,0:24:72.14:0,72,724	0/0:25,0:25:72.12:0,72,719	0/0:23,0:23:69.15:0,69,699	0/0:25,0:25:75.16:0,75,757	0/0:32,0:32:93.14:0,93,915	0/0:6,0:6:18.04:0,18,184
chr10	21978110	.	C	CTG	32365.74	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-6.452;DP=717;FS=0.663;HRun=0;HaplotypeScore=99.4134;InbreedingCoeff=0.9987;MQ=81.21;MQ0=4;MQRankSum=-9.676;QD=47.74;ReadPosRankSum=5.744;VQSLOD=6.1057;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,31:31:72.25:1319,72,0	1/1:0,17:17:41.98:767,42,0	0/0:21,0:21:48.16:0,48,680	0/0:18,0:18:51.07:0,51,667	1/1:5,26:31:72.25:1319,72,0	1/1:1,40:42:99:2145,117,0	1/1:4,18:22:51.17:934,51,0	1/1:1,30:32:93.30:1661,93,0	1/1:1,21:22:63.22:1152,63,0	1/1:2,28:31:84.29:1518,84,0	1/1:0,19:19:57.20:1045,57,0	1/1:0,35:35:96.33:1760,96,0	1/1:2,32:35:90.31:1635,90,0	1/1:1,28:29:75.26:1375,75,0	1/1:1,27:28:81.28:1482,81,0	1/1:3,25:26:72.25:1317,72,0	1/1:0,15:15:42.14:769,42,0	1/1:1,7:9:24.08:430,24,0	1/1:2,29:31:87.30:1581,87,0	1/1:4,18:22:60.21:1091,60,0	1/1:1,40:42:99:1811,99,0	1/1:2,22:24:63.22:1155,63,0	1/1:2,12:15:36.12:656,36,0	1/1:0,26:25:62.52:1152,63,0	1/1:1,18:19:54.19:990,54,0	1/1:3,26:28:75.26:1376,75,0	1/1:0,31:30:72.08:1320,72,0	1/1:0,12:12:33.11:605,33,0
chr10	21978200	.	TTTTGTG	T	10446.91	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=16.763;DP=617;FS=20.691;HRun=0;HaplotypeScore=151.5069;InbreedingCoeff=0.9886;MQ=86.35;MQ0=1;MQRankSum=-15.996;QD=53.85;ReadPosRankSum=-0.031;VQSLOD=3.5138;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,17:23:42.11:931,42,0	1/1:0,10:10:27.09:627,27,0	0/0:26,0:26:69.22:0,69,2237	0/0:20,0:21:63.22:0,63,2117	0/0:34,0:34:99:0,102,3445	0/0:39,0:39:99:0,111,3867	0/0:22,0:22:66.22:0,66,2335	1/1:0,21:21:63.09:1295,63,0	1/1:3,10:13:33.10:732,33,0	0/0:26,0:26:72.23:0,72,2428	0/0:21,0:21:63.22:0,63,2307	0/0:26,0:26:66.23:0,66,2387	0/0:27,0:27:75.26:0,75,2629	0/0:25,0:25:75.26:0,75,2748	1/1:3,20:23:69.19:1491,69,0	1/1:4,18:22:63.20:1442,63,0	1/1:2,6:7:18.06:425,18,0	1/1:0,3:3:9.03:213,9,0	1/1:2,15:17:39.03:791,39,0	1/1:1,39:40:96.28:2216,96,0	1/1:6,8:14:18.01:284,18,0	0/0:23,0:23:69.17:0,69,2243	0/0:21,0:21:60.21:0,60,2199	0/0:23,0:22:66.22:0,66,2334	0/0:23,0:23:69.23:0,69,2377	0/0:24,0:23:69.24:0,69,2524	0/0:34,0:34:90.31:0,90,3259	0/0:8,0:8:21.07:0,21,733
chr10	21978390	.	C	CTTTA	16477.27	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=7.640;DP=677;FS=0.632;HRun=0;HaplotypeScore=121.1294;InbreedingCoeff=0.9976;MQ=92.88;MQ0=0;MQRankSum=-9.551;QD=75.24;ReadPosRankSum=0.336;VQSLOD=6.7178;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,24:28:75.26:2115,75,0	1/1:1,11:12:36.08:946,36,0	0/0:32,0:33:96.31:0,96,1909	0/0:29,0:29:84.24:0,84,1651	0/0:31,0:31:93.32:0,93,1942	0/0:25,0:25:75.26:0,75,1571	0/0:25,0:25:75.22:0,75,1480	1/1:5,15:24:72.18:1834,72,0	1/1:2,17:21:51.18:1477,51,0	0/0:31,0:31:93.32:0,93,1934	0/0:28,0:28:81.26:0,81,1653	0/0:17,0:17:51.18:0,51,1069	0/0:32,0:32:93.30:0,93,1910	0/0:25,0:25:72.25:0,72,1498	1/1:3,24:29:81.28:2263,81,0	1/1:2,18:22:60.21:1738,60,0	1/1:2,18:20:54.14:1398,54,0	1/1:3,5:8:15.05:435,15,0	1/1:3,8:11:33.11:946,33,0	1/1:2,27:30:87.30:2450,87,0	1/1:2,11:14:33.11:875,33,0	0/0:24,0:24:72.25:0,72,1510	0/0:23,0:23:69.24:0,69,1411	0/0:26,0:26:78.27:0,78,1636	0/0:30,0:30:87.30:0,87,1803	0/0:33,0:33:93.31:0,93,1898	0/0:35,0:35:99:0,105,2202	0/0:11,0:11:33.11:0,33,692
chr10	21978919	.	AAT	A	7111.24	PASS	AB=1.000;AC=31;AF=0.554;AN=56;BaseQRankSum=5.823;DP=602;FS=3.131;HRun=0;HaplotypeScore=122.5371;InbreedingCoeff=0.8954;MQ=68.74;MQ0=0;MQRankSum=-5.195;QD=20.15;ReadPosRankSum=-2.709;VQSLOD=4.1457;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,27:30:87.13:1134,87,0	1/1:6,1:7:15.35:70,15,0	0/0:11,0:11:27.08:0,27,406	0/0:8,0:8:21.07:0,21,370	1/1:42,0:42:96.12:407,96,0	0/0:25,0:25:16.83:0,17,368	0/1:15,0:15:13.08:13,0,158	1/1:21,0:21:51.89:297,52,0	1/1:24,0:24:58.25:210,58,0	0/0:37,0:37:37.11:0,37,497	0/0:20,0:20:25.71:0,26,291	0/0:10,0:10:3.70:0,4,139	0/0:25,0:25:10.52:0,11,317	0/0:24,0:24:33.96:0,34,353	0/0:24,0:24:57.18:0,57,1002	1/1:16,1:17:42.94:183,43,0	1/1:20,4:24:53.68:263,54,0	1/1:9,0:9:22.68:103,23,0	1/1:17,0:17:24.93:138,25,0	1/1:19,1:20:47.13:234,47,0	1/1:13,1:14:35.88:143,36,0	1/1:22,0:22:51.83:177,52,0	0/0:28,0:28:24.07:0,24,409	0/0:12,0:12:23.42:0,23,186	0/0:25,0:25:14.95:0,15,346	1/1:2,37:39:99:1610,117,0	1/1:4,33:37:99:1533,111,0	1/1:3,12:15:45.11:596,45,0
chr10	21978920	.	AT	A	10909.38	PASS	AB=0.977;AC=40;AF=0.714;AN=56;BaseQRankSum=-0.574;DP=605;FS=5.897;HRun=1;HaplotypeScore=97.7141;InbreedingCoeff=0.1424;MQ=69.69;MQ0=0;MQRankSum=-3.580;QD=19.41;ReadPosRankSum=-4.211;VQSLOD=3.6205;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:30:85.22:541,85,0	1/1:1,6:7:21.02:255,21,0	0/0:12,0:12:30.07:0,30,378	0/0:9,0:9:24.08:0,24,343	1/1:3,39:42:99:1512,123,0	0/1:24,1:25:31.13:31,0,62	0/1:14,1:15:12.01:86,0,12	1/1:0,21:21:63.05:708,63,0	1/1:2,22:24:72.19:964,72,0	0/1:35,2:37:42.85:101,0,43	0/1:21,0:21:42.39:42,0,43	0/1:10,0:10:8.55:9,0,20	0/1:25,0:25:39.40:84,0,39	0/1:24,0:24:39.80:42,0,40	0/0:22,0:22:57.19:0,57,795	1/1:3,15:18:54.16:707,54,0	1/1:6,18:24:69.03:841,69,0	1/1:2,7:9:27.03:336,27,0	1/1:3,14:17:45.71:650,46,0	1/1:5,16:21:63:746,63,0	1/1:1,13:14:42.05:541,42,0	1/1:1,21:22:66.21:900,66,0	0/1:28,0:28:42.17:42,0,58	0/1:11,1:12:27.90:43,0,28	0/1:25,0:25:39.39:39,0,46	1/1:39,0:39:99:729,114,0	1/1:37,0:37:99:677,109,0	1/1:15,0:15:44.08:284,44,0
chr10	21978979	.	T	TA	9982.48	PASS	AB=0.833;AC=33;AF=0.589;AN=56;BaseQRankSum=-5.824;DP=609;FS=4.287;HRun=8;HaplotypeScore=80.1495;InbreedingCoeff=0.9064;MQ=74.17;MQ0=0;MQRankSum=-3.309;QD=27.50;ReadPosRankSum=-0.236;VQSLOD=5.1555;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,14:17:42.08:470,42,0	1/1:0,8:8:24.07:277,24,0	0/0:15,0:15:30.48:0,30,275	0/0:8,0:8:11.99:0,12,107	1/1:8,39:47:99:1278,111,0	0/0:31,0:31:81:0,81,733	0/0:20,0:20:54.01:0,54,489	1/1:9,28:37:81.24:932,81,0	1/1:1,17:18:48.14:554,48,0	0/0:26,0:26:63.02:0,63,577	0/0:30,0:30:77.16:0,77,712	0/0:20,0:20:51.01:0,51,462	0/0:23,0:23:51.02:0,51,467	0/0:22,0:22:54.02:0,54,494	1/1:1,0:19:42.61:217,43,0	1/1:2,20:22:54.16:623,54,0	1/1:4,18:22:57.16:647,57,0	1/1:1,18:19:48.14:554,48,0	1/1:0,15:15:45.13:519,45,0	1/1:1,31:32:90.23:1025,90,0	1/1:1,2:3:5.93:40,6,0	1/1:1,18:19:48.10:539,48,0	0/0:18,0:18:48.01:0,48,439	0/1:8,2:10:39.22:39,0,190	0/0:33,0:33:93.05:0,93,851	1/1:8,27:35:65.79:996,66,0	1/1:1,28:30:87.25:996,87,0	1/1:2,8:10:24.07:277,24,0
chr10	21980339	.	T	TACTC	3093.28	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-9.818;DP=678;FS=6.853;HRun=0;HaplotypeScore=115.5267;InbreedingCoeff=0.9983;MQ=87.02;MQ0=0;MQRankSum=-0.724;QD=49.89;ReadPosRankSum=2.132;VQSLOD=4.7960;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:75.22:0,75,1231	0/0:14,0:14:42.12:0,42,682	0/0:22,0:22:45.12:0,45,703	0/0:25,0:25:51.03:0,51,771	0/0:32,0:32:84.25:0,84,1414	0/0:29,0:29:81.28:0,81,1419	0/0:15,0:15:42.14:0,42,736	0/0:31,0:31:81.27:0,81,1377	0/0:27,0:27:75.26:0,75,1302	0/0:33,0:33:87.15:0,87,1436	0/0:20,0:20:60.21:0,60,1051	0/0:29,0:29:78.27:0,78,1344	0/0:32,0:32:87.28:0,87,1497	0/0:21,0:21:54.18:0,54,942	0/0:32,0:32:84.27:0,84,1436	0/0:31,0:31:81.28:0,81,1416	0/0:24,0:24:69.24:0,69,1209	0/0:12,0:12:30.10:0,30,526	0/0:19,0:19:48.15:0,48,761	0/0:26,0:26:66.23:0,66,1147	0/0:35,0:35:93.32:0,93,1622	0/0:26,0:26:69.24:0,69,1209	0/0:17,0:17:48.15:0,48,813	0/0:17,0:17:48.16:0,48,837	0/0:20,0:20:51.17:0,51,892	1/1:12,15:28:51.16:1245,51,0	1/1:3,21:25:57.20:1455,57,0	1/1:0,9:9:21.07:536,21,0
chr10	21981445	.	TC	T	15665.41	PASS	AB=1.000;AC=47;AF=0.839;AN=56;BaseQRankSum=7.214;DP=838;FS=8.088;HRun=4;HaplotypeScore=173.4065;InbreedingCoeff=0.8876;MQ=87.53;MQ0=0;MQRankSum=-8.618;QD=21.58;ReadPosRankSum=6.035;VQSLOD=3.0711;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:49,0:49:99:749,131,0	1/1:0,5:5:12.04:144,12,0	0/0:34,0:34:55.09:0,55,1210	0/0:29,0:29:81.24:0,81,1082	0/0:28,0:28:84.28:0,84,1171	1/1:29,0:29:75.82:439,76,0	1/1:27,0:27:70.01:424,70,0	1/1:3,37:40:99:1332,111,0	1/1:1,33:34:96.29:1151,96,0	1/1:33,0:33:70.84:412,71,0	1/1:29,0:29:81.32:452,81,0	1/1:42,0:42:57.26:604,57,0	1/1:43,0:43:99:723,122,0	1/1:42,0:42:57.21:594,57,0	1/1:1,37:38:99:1224,102,0	1/1:1,24:25:65.98:792,66,0	1/1:0,31:31:81.25:972,81,0	1/1:1,14:15:42.13:503,42,0	1/1:3,17:20:48.14:564,48,0	1/1:0,31:31:93.29:1116,93,0	1/1:3,38:41:99:1332,111,0	0/0:21,0:21:60.20:0,60,839	1/1:30,0:30:87.34:494,87,0	1/1:38,0:38:87.48:520,87,0	1/1:19,0:19:20.55:210,21,0	1/1:31,0:31:60.39:383,60,0	1/1:29,0:28:79.10:473,79,0	0/1:5,0:5:5.21:58,0,5
chr10	21981449	.	CT	C	19508.43	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=9.969;DP=821;FS=2.622;HRun=1;HaplotypeScore=152.4331;InbreedingCoeff=0.9779;MQ=88.03;MQ0=0;MQRankSum=-9.461;QD=27.52;ReadPosRankSum=6.621;VQSLOD=4.5910;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,48:48:99:1886,135,0	1/1:5,0:5:10.75:45,11,0	0/0:32,0:32:49.20:0,49,1314	0/0:30,0:30:87.09:0,87,1206	0/0:29,0:29:87.28:0,87,1364	1/1:0,29:29:78.26:1090,78,0	1/1:0,29:29:72.24:1005,72,0	1/1:37,0:37:92.77:378,93,0	1/1:34,0:34:64.47:351,64,0	1/1:0,31:31:93.31:1300,93,0	1/1:0,29:29:84.28:1174,84,0	1/1:0,40:40:99:1548,111,0	1/1:0,42:42:99:1759,126,0	1/1:0,40:40:99:1549,111,0	1/1:38,0:38:72.96:342,73,0	1/1:24,0:24:57.94:234,58,0	1/1:32,0:32:51.05:288,51,0	1/1:15,0:15:22.12:149,22,0	1/1:17,0:17:19.46:135,19,0	1/1:31,0:31:82.64:341,83,0	1/1:41,0:41:36.15:345,36,0	0/0:21,0:21:63.19:0,63,962	1/1:0,31:31:90.30:1258,90,0	1/1:0,37:37:93.23:1273,93,0	1/1:0,17:17:45.15:629,45,0	1/1:0,28:28:81.27:1132,81,0	1/1:0,29:29:81.27:1131,81,0	1/1:0,5:5:12.04:168,12,0
chr10	21982595	.	GA	G	1475.19	PASS	AB=0.738;AC=19;AF=0.339;AN=56;BaseQRankSum=-2.842;DP=564;FS=0.431;HRun=14;HaplotypeScore=80.7541;InbreedingCoeff=0.5535;MQ=56.54;MQ0=8;MQRankSum=5.592;QD=6.28;ReadPosRankSum=6.506;VQSLOD=2.5083;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:27:38.80:0,39,216	0/0:7,0:10:12.22:0,12,78	0/0:4,0:4:4.42:0,4,40	0/1:5,0:5:5.48:5,0,64	0/0:14,0:24:39.22:0,39,241	1/1:5,16:23:36.71:238,37,0	1/1:6,10:18:27.80:176,28,0	0/0:15,0:23:46.96:0,47,327	0/0:13,1:25:28.45:0,28,272	1/1:13,3:14:8.79:61,9,0	0/1:4,7:11:9.91:85,0,10	0/1:8,16:25:22.76:220,0,23	1/1:3,13:19:26.45:161,26,0	1/1:11,10:21:13.29:185,13,0	0/1:27,2:31:0.83:1,0,318	0/0:9,1:20:17.17:0,17,190	0/0:10,0:32:51.89:0,52,314	0/0:11,0:24:43.33:0,43,262	0/0:8,0:14:21.67:0,22,133	0/0:14,1:19:14.48:0,14,183	0/0:14,0:30:25.84:0,26,148	0/0:10,0:19:25.08:0,25,144	1/1:4,10:15:1.55:132,2,0	0/1:9,17:28:31.87:227,0,32	1/1:8,13:22:5.48:168,5,0	0/0:25,0:25:33.72:0,34,219	0/0:16,0:16:18.82:0,19,115	0/0:13,0:10:14.54:0,15,84
chr10	21984068	.	CAG	C	11367.30	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=17.947;DP=656;FS=0.300;HRun=0;HaplotypeScore=159.4177;InbreedingCoeff=0.9547;MQ=66.54;MQ0=1;MQRankSum=-3.021;QD=31.31;ReadPosRankSum=5.570;VQSLOD=6.4744;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:36,0:36:99:962,102,0	0/0:7,0:7:21.04:0,21,339	0/0:10,0:10:30:0,30,395	0/0:12,0:12:21.80:0,22,402	1/1:34,1:35:71.82:627,72,0	1/1:0,27:27:63.21:962,63,0	1/1:1,16:17:45.15:675,45,0	0/0:60,0:60:99:0,178,3008	0/0:18,0:18:51.16:0,51,916	1/1:0,29:30:90.14:1243,90,0	1/1:0,29:30:63.13:921,63,0	1/1:0,28:28:69.23:1045,69,0	1/1:1,25:26:60.20:916,60,0	1/1:0,21:21:48.16:714,48,0	1/1:22,0:22:53.47:463,53,0	0/0:12,0:12:36.11:0,36,635	0/0:24,0:24:72.17:0,72,1260	0/0:21,0:21:60.18:0,60,1052	0/0:22,0:22:66.23:0,66,1258	0/0:37,0:37:99:0,108,1786	0/0:15,0:15:45.12:0,45,763	1/1:13,0:14:35.93:325,36,0	1/1:0,24:24:45.15:678,45,0	1/1:1,22:24:45.15:648,45,0	1/1:0,28:28:78.26:1188,78,0	0/0:26,1:26:1.50:0,1,433	0/0:25,0:25:41.77:0,42,510	0/0:3,0:3:5.95:0,6,52
chr10	21984076	.	TA	T	2796.75	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=18.881;DP=660;FS=1.696;HRun=1;HaplotypeScore=178.0891;InbreedingCoeff=0.6647;MQ=66.57;MQ0=1;MQRankSum=-4.361;QD=8.40;ReadPosRankSum=7.597;VQSLOD=0.9078;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:69.34:0,69,324	0/0:8,0:8:24.08:0,24,373	0/0:9,0:9:12.98:0,13,308	0/0:12,0:12:33.08:0,33,460	1/1:3,31:33:67.59:764,68,0	1/1:26,0:26:43.18:130,43,0	0/1:19,0:19:12.35:79,0,12	0/0:56,0:56:99:0,169,2656	0/0:18,0:18:54.15:0,54,815	0/1:36,0:36:76.45:76,0,152	1/1:29,0:29:8.44:114,8,0	1/1:28,0:28:38.88:154,39,0	0/1:25,0:25:4.26:92,0,4	0/1:22,0:22:20.60:97,0,21	1/1:0,24:24:57.18:721,57,0	0/0:13,0:13:39.13:0,39,603	0/0:26,0:26:75.25:0,75,1178	0/0:22,0:22:63.17:0,63,956	0/0:25,0:25:75.26:0,75,1189	0/0:31,0:31:93.32:0,93,1465	0/0:14,0:14:42.14:0,42,671	1/1:2,15:17:36.04:415,36,0	1/1:23,0:23:32.48:103,32,0	0/1:21,0:21:0.26:99,0,0	1/1:29,0:29:44.65:159,45,0	0/0:30,0:29:83.16:0,83,1341	0/0:24,0:24:72.25:0,72,1146	0/0:3,0:3:9.03:0,9,144
chr10	21984078	.	TA	T	5082.97	PASS	AB=1.000;AC=27;AF=0.482;AN=56;BaseQRankSum=19.005;DP=660;FS=3.321;HRun=1;HaplotypeScore=169.8345;InbreedingCoeff=0.9459;MQ=66.52;MQ0=1;MQRankSum=-3.735;QD=13.81;ReadPosRankSum=6.156;VQSLOD=4.4946;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,36:37:99:1329,104,0	0/0:8,0:8:24.06:0,24,329	0/0:10,0:10:27.34:0,27,306	0/0:11,0:11:30.08:0,30,377	1/1:33,0:32:68.61:766,69,0	1/1:25,0:25:46.41:154,46,0	1/1:18,1:19:35.79:171,36,0	0/0:56,0:56:99:0,169,2323	0/0:17,0:17:51.14:0,51,688	0/1:36,0:36:2.44:95,0,2	1/1:28,0:28:51.74:234,52,0	1/1:29,0:29:53.34:210,53,0	1/1:24,0:24:37.07:151,37,0	1/1:22,0:22:29.68:167,30,0	1/1:25,0:25:60.09:742,60,0	0/0:14,0:14:42.10:0,42,530	0/0:25,0:25:75.17:0,75,1028	0/0:23,0:23:66.19:0,66,882	0/0:25,0:25:75.23:0,75,1049	0/0:30,0:30:90.26:0,90,1245	0/0:14,0:14:42.09:0,42,554	1/1:17,0:17:39.20:460,39,0	1/1:22,1:23:42.12:197,42,0	1/1:20,1:21:33.26:194,33,0	1/1:29,0:29:57.97:214,58,0	0/0:31,0:30:85.93:0,86,1195	0/0:24,0:24:72.14:0,72,982	0/0:4,0:4:9.01:0,9,112
chr10	21985602	.	C	CAA	3432.62	PASS	AB=0.980;AC=16;AF=0.286;AN=56;BaseQRankSum=3.311;DP=627;FS=9.741;HRun=12;HaplotypeScore=109.5391;InbreedingCoeff=0.7502;MQ=73.02;MQ0=0;MQRankSum=-0.194;QD=13.41;ReadPosRankSum=-4.081;VQSLOD=0.8345;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:12,1:27:0.22:149,0,0	0/0:13,0:13:23.87:0,24,222	0/1:14,0:16:30.08:30,0,96	0/0:14,0:14:14.14:0,14,143	1/1:17,0:42:84.10:655,84,0	0/0:20,0:20:41.95:0,42,389	0/0:12,0:12:30.01:0,30,278	0/0:37,0:43:40.78:0,41,489	0/0:24,0:32:26.47:0,26,481	0/0:25,0:28:50.56:0,51,495	0/0:17,0:17:32.91:0,33,297	0/0:12,0:13:29.64:0,30,260	0/1:23,0:24:28.92:29,0,263	0/0:21,0:26:41.83:0,42,433	1/1:4,25:31:35.61:467,36,0	0/0:18,0:20:41.39:0,41,357	0/0:13,0:14:17.75:0,18,213	0/0:6,0:6:15:0,15,139	0/0:17,0:19:32.49:0,32,329	0/0:14,0:17:11.85:0,12,276	0/0:11,0:15:8.02:0,8,180	1/1:15,1:30:51.93:437,52,0	0/0:21,0:25:40.67:0,41,371	0/0:8,0:9:11.86:0,12,158	0/0:28,0:28:56.87:0,57,522	1/1:9,13:26:38.53:433,39,0	1/1:9,32:43:29.42:712,29,0	1/1:2,12:16:41.11:521,41,0
chr10	21986351	.	GT	G	1602.28	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.948;DP=697;FS=0.000;HRun=4;HaplotypeScore=69.4277;InbreedingCoeff=0.9698;MQ=66.81;MQ0=0;MQRankSum=-1.711;QD=31.42;ReadPosRankSum=2.626;VQSLOD=4.1770;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,49:51:99:1697,117,0	0/0:11,0:11:30.09:0,30,405	0/0:23,0:19:45.13:0,45,583	0/0:22,0:22:51.14:0,51,664	0/0:31,0:31:90.29:0,90,1245	0/0:16,0:16:48.15:0,48,657	0/0:20,0:20:60.20:0,60,840	0/0:27,0:27:75.23:0,75,1006	0/0:32,0:32:96.30:0,96,1313	0/0:40,0:40:99:0,117,1593	0/0:23,0:23:69.19:0,69,940	0/0:24,0:24:72.24:0,72,1007	0/0:23,0:23:69.23:0,69,965	0/0:37,0:37:99:0,111,1523	0/0:25,0:25:72.24:0,72,1008	0/0:25,0:25:75.25:0,75,1050	0/0:30,0:30:87.28:0,87,1205	0/0:27,0:27:81.27:0,81,1134	0/0:20,0:20:60.19:0,60,822	0/0:21,0:21:63.18:0,63,847	0/0:18,0:18:54.17:0,54,738	0/0:25,0:25:75.25:0,75,1050	0/0:23,0:23:69.19:0,69,924	0/0:30,0:30:87.29:0,87,1218	0/0:17,0:17:51.17:0,51,714	0/0:33,0:33:93.30:0,93,1287	0/0:19,0:19:57.18:0,57,781	0/0:4,0:4:12.04:0,12,168
chr10	21986385	.	TG	T	1495.13	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=5.329;DP=760;FS=1.697;HRun=7;HaplotypeScore=83.0932;InbreedingCoeff=0.9991;MQ=72.71;MQ0=0;MQRankSum=-2.876;QD=24.51;ReadPosRankSum=0.915;VQSLOD=4.0800;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,123,1530	0/0:12,0:12:33.09:0,33,401	0/0:25,0:25:72.16:0,72,856	0/0:25,0:25:37.84:0,38,748	0/0:34,0:34:99:0,99,1242	0/0:19,0:19:54.17:0,54,678	0/0:25,0:25:72.23:0,72,906	0/0:26,0:26:75.23:0,75,932	0/0:30,0:30:81.26:0,81,1018	0/0:36,0:36:90.29:0,90,1124	0/0:28,0:28:72.22:0,72,892	0/0:22,0:22:60.19:0,60,755	0/0:36,0:36:99:0,102,1243	0/0:37,0:37:99:0,108,1345	0/0:35,0:35:99:0,102,1264	0/0:33,0:33:96.28:0,96,1171	0/0:27,0:27:78.25:0,78,981	0/0:29,0:30:81.26:0,81,1016	0/0:17,0:17:48.15:0,48,597	0/0:28,0:28:81.26:0,81,1013	0/0:23,0:23:69.22:0,69,866	0/0:23,0:23:66.21:0,66,830	0/0:28,0:28:75.24:0,75,936	0/0:29,0:29:84.27:0,84,1055	0/0:23,0:23:66.19:0,66,805	1/1:3,29:32:52.45:842,52,0	1/1:1,18:19:54.12:550,54,0	1/1:1,9:10:24.05:245,24,0
chr10	21987547	.	TA	T	8418.48	PASS	AB=0.591;AC=49;AF=0.907;AN=54;BaseQRankSum=-6.208;DP=401;FS=0.960;HRun=8;HaplotypeScore=51.7789;InbreedingCoeff=0.6702;MQ=79.86;MQ0=3;MQRankSum=-4.662;QD=24.33;ReadPosRankSum=4.274;VQSLOD=5.3534;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,17:17:48.08:463,48,0	1/1:0,8:8:21.03:202,21,0	0/0:22,0:10:7.41:0,7,89	0/0:30,2:18:10.51:0,11,169	1/1:0,18:18:54.08:518,54,0	1/1:0,7:7:18.03:174,18,0	1/1:1,4:5:9.01:87,9,0	1/1:3,20:22:57.09:550,57,0	1/1:2,11:13:30.05:290,30,0	1/1:3,16:19:48.06:457,48,0	1/1:1,20:21:57.08:549,57,0	1/1:0,10:10:27:261,27,0	0/1:4,9:13:12.19:179,0,12	1/1:1,6:7:15.02:145,15,0	1/1:1,15:16:33.05:319,33,0	1/1:1,13:14:33.05:319,33,0	1/1:2,16:18:42.07:405,42,0	1/1:1,22:23:60.10:579,60,0	1/1:2,12:14:36.06:348,36,0	1/1:0,20:20:57.09:549,57,0	1/1:1,8:9:21.03:203,21,0	./.	1/1:1,8:9:21.03:202,21,0	1/1:0,3:3:9.01:87,9,0	1/1:0,20:20:57.09:550,57,0	1/1:0,15:15:45.07:434,45,0	1/1:1,15:16:42.07:405,42,0	1/1:3,5:6:15.02:145,15,0
chr10	21988938	.	GTGT	G	8806.37	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-12.807;DP=588;FS=0.348;HRun=0;HaplotypeScore=123.4605;InbreedingCoeff=0.9921;MQ=69.82;MQ0=8;MQRankSum=-4.735;QD=40.40;ReadPosRankSum=4.623;VQSLOD=5.7853;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:29.68:0,30,226	0/0:14,0:14:42.13:0,42,584	0/0:27,0:24:72:0,72,1402	0/0:27,0:24:64.04:0,64,1233	0/0:26,0:26:73.48:0,73,937	1/1:1,25:25:51.17:950,51,0	1/1:0,15:15:30.10:557,30,0	0/0:34,0:34:82.55:0,83,954	0/0:20,0:20:57.89:0,58,714	1/1:1,29:29:84.22:1456,84,0	1/1:1,18:18:39.13:709,39,0	1/1:1,27:27:66.23:1206,66,0	1/1:1,28:30:78.27:1416,78,0	1/1:1,14:14:39.13:726,39,0	0/0:21,0:21:45.67:0,46,542	0/0:27,0:27:78.13:0,78,922	0/0:19,0:19:44.68:0,45,616	0/0:19,0:18:52.87:0,53,720	0/0:20,0:20:43.63:0,44,576	0/0:22,0:22:56.74:0,57,846	0/0:15,0:15:38.51:0,39,512	0/0:23,0:23:28.99:0,29,650	1/1:0,17:17:26.91:501,27,0	1/1:1,23:23:33.11:615,33,0	1/1:0,14:14:36.12:671,36,0	0/0:12,0:12:9.98:0,10,69	0/0:19,0:19:40.20:0,40,256	0/0:12,0:12:23.79:0,24,186
chr10	21988939	.	T	TGG	1218.08	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=-4.728;DP=595;FS=3.804;HRun=1;HaplotypeScore=141.3283;InbreedingCoeff=0.8417;MQ=71.94;MQ0=8;MQRankSum=-3.466;QD=15.04;ReadPosRankSum=-0.616;VQSLOD=0.6109;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,13:17:24.08:400,24,0	0/0:15,0:15:35.24:0,35,241	0/0:28,0:25:68.96:0,69,900	0/0:29,0:26:53.08:0,53,738	0/0:26,0:26:71.25:0,71,498	0/0:26,0:25:48.29:0,48,236	0/0:15,0:15:28.31:0,28,137	0/0:33,0:33:66.01:0,66,427	0/0:20,0:20:59.15:0,59,396	0/0:30,0:29:69.96:0,70,338	0/0:19,0:18:34.09:0,34,167	0/0:28,0:27:60.03:0,60,291	0/0:29,0:30:51.22:0,51,314	0/0:15,0:14:36.93:0,37,181	0/0:20,0:20:19.50:0,20,243	0/0:26,0:27:27.17:0,27,362	0/1:18,0:18:25.30:25,0,233	0/0:19,0:18:53.36:0,53,369	0/0:20,0:20:19.14:0,19,256	0/0:21,0:21:39.60:0,40,399	0/0:15,0:15:16.82:0,17,227	0/0:23,0:23:44.10:0,44,340	0/0:17,0:17:25.15:0,25,125	0/0:24,0:23:31.25:0,31,153	0/0:14,0:14:34.05:0,34,166	1/1:3,8:12:8.65:97,9,0	1/1:2,19:21:31.15:584,31,0	1/1:3,9:13:18.98:271,19,0
chr10	21988965	.	C	CA	630.15	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-3.493;DP=593;FS=2.914;HRun=7;HaplotypeScore=107.2721;InbreedingCoeff=0.9659;MQ=76.28;MQ0=7;MQRankSum=-1.097;QD=25.21;ReadPosRankSum=0.156;VQSLOD=3.2212;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:48.06:0,48,463	0/0:13,0:13:36.06:0,36,348	0/0:17,0:17:23.92:0,24,213	0/0:17,0:17:25.56:0,26,304	0/0:27,0:27:72.11:0,72,695	0/0:26,0:25:54.09:0,54,521	0/0:16,0:16:36.04:0,36,341	0/0:31,0:31:75.09:0,75,714	0/0:19,0:19:54.09:0,54,521	0/0:27,0:26:72.11:0,72,691	0/0:20,0:19:45.07:0,45,434	0/0:26,0:25:57.09:0,57,550	0/0:33,0:33:81.11:0,81,776	0/0:16,0:15:39.06:0,39,376	1/1:2,23:25:60.18:725,60,0	0/0:31,0:31:90.11:0,90,856	0/0:17,0:17:48.08:0,48,464	0/0:22,0:21:54.07:0,54,521	0/0:21,0:21:54.08:0,54,522	0/0:28,0:28:81.13:0,81,782	0/0:14,0:14:39.06:0,39,376	0/0:17,0:17:36.06:0,36,348	0/0:18,0:18:32.87:0,33,318	0/0:18,0:17:42.05:0,42,399	0/0:15,0:15:36.06:0,36,347	0/0:22,0:22:57.09:0,57,550	0/0:23,0:23:54.08:0,54,521	0/0:8,0:8:12.02:0,12,116
chr10	21989480	.	CT	C	7732.63	PASS	AC=20;AF=0.370;AN=54;BaseQRankSum=12.689;DP=607;FS=0.651;HRun=2;HaplotypeScore=60.6042;InbreedingCoeff=0.9997;MQ=85.45;MQ0=0;MQRankSum=-1.588;QD=35.97;ReadPosRankSum=3.072;VQSLOD=5.3515;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:39:99:0,111,1636	0/0:8,0:8:24.08:0,24,355	0/0:18,0:18:51.13:0,51,714	0/0:21,0:21:57.18:0,57,801	0/0:24,0:24:72.24:0,72,1079	1/1:0,20:20:60.20:779,60,0	1/1:0,34:34:90.29:1168,90,0	0/0:33,0:33:96.32:0,96,1416	0/0:19,0:19:57.19:0,57,854	1/1:1,16:17:48.14:607,48,0	1/1:0,17:17:42.14:545,42,0	1/1:0,17:17:48.16:623,48,0	1/1:0,23:23:69.22:895,69,0	1/1:0,25:25:69.22:895,69,0	0/0:28,0:28:81.27:0,81,1213	0/0:18,0:18:54.18:0,54,809	0/0:25,0:25:75.25:0,75,1123	0/0:18,0:18:54.18:0,54,809	0/0:24,0:24:69.21:0,69,981	0/0:31,0:31:90.30:0,90,1348	0/0:21,0:21:60.20:0,60,899	0/0:15,0:15:39.13:0,39,584	1/1:0,24:24:66.21:857,66,0	1/1:0,19:19:54.18:701,54,0	1/1:0,19:19:51.17:662,51,0	0/0:26,0:26:75.25:0,75,1124	0/0:23,0:23:66.22:0,66,984	./.
chr10	21990053	.	AC	A	1714.09	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-9.205;DP=401;FS=1.237;HRun=8;HaplotypeScore=50.2518;InbreedingCoeff=0.6506;MQ=42.88;MQ0=58;MQRankSum=2.171;QD=17.49;ReadPosRankSum=1.590;VQSLOD=3.4604;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,30:32:63.05:598,63,0	0/0:1,0:2:0:0,0,0	0/0:31,0:8:17.98:0,18,192	0/0:23,0:9:21.02:0,21,223	1/1:1,20:19:45.07:434,45,0	0/0:6,0:13:22.93:0,23,116	0/0:4,0:7:8.63:0,9,44	0/0:15,0:5:3:0,3,26	0/0:4,0:6:5.72:0,6,29	0/0:7,0:13:14.34:0,14,73	0/0:8,0:13:6.27:0,6,32	0/0:3,0:7:8.63:0,9,44	0/0:5,0:9:5.67:0,6,28	0/0:4,0:7:5.84:0,6,34	1/1:1,29:29:66.11:637,66,0	0/0:4,0:8:14.34:0,14,73	0/0:7,0:11:5.75:0,6,29	0/0:9,0:7:8.84:0,9,59	0/0:9,0:4:2.84:0,3,14	0/0:1,0:4:8.56:0,9,43	0/0:5,0:5:2.88:0,3,15	1/1:3,9:11:20.94:197,21,0	0/0:4,0:3:4.43:0,4,19	0/0:6,0:13:20.13:0,20,102	0/0:3,0:7:11.47:0,11,58	0/0:7,0:14:31.77:0,32,177	0/0:3,0:22:45.97:0,46,233	0/0:0,0:6:17.25:0,17,88
chr10	21993550	.	C	CT	719.80	PASS	AB=1.000;AC=15;AF=0.357;AN=42;BaseQRankSum=-2.147;DP=405;FS=5.325;HRun=0;HaplotypeScore=34.5203;InbreedingCoeff=0.5496;MQ=38.29;MQ0=226;MQRankSum=2.298;QD=5.07;ReadPosRankSum=1.969;VQSLOD=2.4268;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:2:2.90:0,3,16	0/0:7,0:6:6.82:0,7,42	0/0:11,0:1:3:0,3,29	0/0:16,0:5:8.73:0,9,69	0/0:13,0:9:3.01:0,3,41	1/1:2,15:11:3.01:38,3,0	1/1:2,15:4:9.03:124,9,0	./.	0/0:11,0:4:6.02:0,6,83	1/1:4,14:13:36.09:447,36,0	1/1:1,20:15:6.02:83,6,0	1/1:0,20:10:3.01:41,3,0	1/1:3,22:12:6.02:83,6,0	0/0:1,18:6:0:0,0,0	0/0:18,0:9:14.94:0,15,164	0/0:18,0:13:26.93:0,27,330	0/0:21,0:3:6.02:0,6,83	./.	./.	0/0:13,0:12:12.40:0,12,122	./.	0/0:12,0:8:11.94:0,12,122	./.	./.	1/1:1,9:6:3.01:41,3,0	0/0:8,0:6:11.89:0,12,84	0/1:14,0:9:4.33:4,0,29	./.
chr10	21993905	.	AG	A	6726.90	PASS	AB=1.000;AC=24;AF=0.429;AN=56;BaseQRankSum=-17.590;DP=663;FS=5.105;HRun=4;HaplotypeScore=108.1282;InbreedingCoeff=0.6265;MQ=81.14;MQ0=0;MQRankSum=-1.562;QD=19.27;ReadPosRankSum=-2.710;VQSLOD=3.4389;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:41.63:0,42,230	1/1:0,14:14:36.11:430,36,0	0/0:18,0:18:38.81:0,39,476	0/0:22,0:22:51.18:0,51,609	0/1:22,0:22:7.03:7,0,177	0/0:28,0:28:47.03:0,47,268	0/0:29,0:29:20.78:0,21,203	1/1:1,27:28:81.25:969,81,0	1/1:0,23:23:60.18:719,60,0	0/1:29,0:29:12.01:12,0,152	0/1:19,0:19:4.75:5,0,138	0/0:25,0:25:37.84:0,38,205	0/0:30,0:30:70.55:0,71,307	0/1:21,0:21:1.98:2,0,126	0/0:26,0:26:67.01:0,67,265	1/1:0,26:26:60.18:720,60,0	1/1:0,19:19:42.13:503,42,0	1/1:2,22:24:63.13:737,63,0	1/1:1,15:16:45.10:524,45,0	1/1:1,32:33:92.96:1026,93,0	1/1:1,30:31:84.23:992,84,0	0/0:17,0:17:28.32:0,28,159	0/1:15,0:15:9.73:10,0,120	0/0:26,0:26:35.63:0,36,234	0/0:30,0:30:45.37:0,45,320	0/0:23,0:23:21.08:0,21,144	0/1:29,0:29:69.61:70,0,130	0/0:13,0:13:20.78:0,21,131
chr10	21994747	.	TA	T	3195.65	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-7.848;DP=266;FS=15.526;HRun=10;HaplotypeScore=45.8159;InbreedingCoeff=0.8699;MQ=48.64;MQ0=0;MQRankSum=-1.484;QD=20.75;ReadPosRankSum=3.222;VQSLOD=2.9508;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,9:9:23.99:208,24,0	0/0:0,0:6:17.04:0,17,85	0/0:6,0:4:17.86:0,18,168	0/0:1,0:1:3.01:0,3,33	1/1:0,15:14:26.97:233,27,0	1/1:1,12:13:2.85:253,3,0	1/1:0,3:3:9:78,9,0	0/0:0,0:12:31.25:0,31,156	0/0:2,0:11:29.34:0,29,151	1/1:0,14:14:41.99:364,42,0	1/1:0,9:10:29.03:240,29,0	1/1:0,11:11:32.99:286,33,0	1/1:0,12:12:29.99:260,30,0	1/1:0,10:11:29.03:240,29,0	1/1:0,16:16:47.99:416,48,0	0/0:2,0:9:23.06:0,23,152	0/0:1,0:8:17.17:0,17,91	0/0:1,0:10:25.69:0,26,133	0/0:0,0:9:25.22:0,25,122	0/0:1,0:12:28.41:0,28,142	0/0:1,0:2:5.81:0,6,34	1/1:0,9:9:26.99:234,27,0	1/1:0,6:6:11.51:103,12,0	1/1:0,7:7:2.99:26,3,0	1/1:0,18:18:53.99:468,54,0	0/0:9,0:9:27.07:0,27,298	0/0:15,1:15:19.08:0,19,427	0/0:1,0:1:3.01:0,3,33
chr10	21995042	.	C	CT	8083.41	PASS	AB=0.672;AC=30;AF=0.536;AN=56;BaseQRankSum=-13.441;DP=710;FS=2.390;HRun=10;HaplotypeScore=92.8101;InbreedingCoeff=0.5291;MQ=76.09;MQ0=0;MQRankSum=-1.598;QD=16.40;ReadPosRankSum=0.854;VQSLOD=5.1620;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:9,20:29:6.98:501,0,7	0/0:5,0:5:14.97:0,15,120	0/0:21,0:23:23.55:0,24,234	0/1:11,1:13:20.34:20,0,104	0/1:7,24:31:1.31:355,0,1	1/1:5,22:27:48.12:512,48,0	1/1:5,22:27:29.49:519,29,0	0/0:34,0:37:69.28:0,69,543	0/0:28,0:29:70.94:0,71,572	1/1:8,16:24:51.12:539,51,0	0/1:4,9:14:21.02:174,0,21	1/1:4,20:24:48.07:498,48,0	1/1:20,21:41:92.59:916,93,0	0/1:11,15:27:4.32:341,0,4	1/1:5,26:32:22.72:631,23,0	0/0:32,1:35:44.64:0,45,550	0/0:23,1:25:26.97:0,27,417	0/0:18,0:18:44.90:0,45,364	0/0:24,0:25:37.82:0,38,289	0/0:19,0:19:47.88:0,48,388	0/1:19,2:21:4.08:4,0,377	1/1:5,23:29:26.48:458,26,0	0/1:3,11:15:1.39:227,0,1	0/1:8,19:27:22.92:368,0,23	1/1:9,23:32:16.71:572,17,0	1/1:7,24:32:66.13:692,66,0	1/1:9,30:39:16.71:566,17,0	1/1:1,7:8:18.04:191,18,0
chr10	21995829	.	A	AG	25073.98	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-10.004;DP=715;FS=1.932;HRun=3;HaplotypeScore=65.9218;InbreedingCoeff=0.9990;MQ=81.79;MQ0=0;MQRankSum=-10.347;QD=37.93;ReadPosRankSum=6.894;VQSLOD=4.4580;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,43:46:99:1809,131,0	1/1:2,10:12:30.10:420,30,0	0/0:27,0:27:68.75:0,69,771	0/0:27,0:27:69.21:0,69,817	1/1:1,27:28:78.26:1091,78,0	1/1:1,21:22:57.19:798,57,0	1/1:3,21:24:63.21:882,63,0	1/1:0,37:37:99:1505,108,0	1/1:0,32:32:90.30:1260,90,0	1/1:1,35:36:99:1463,105,0	1/1:0,27:27:75.25:1047,75,0	1/1:1,20:21:57.19:798,57,0	1/1:2,24:26:69.23:965,69,0	1/1:0,28:28:69.70:966,70,0	1/1:3,29:32:84.28:1177,84,0	1/1:0,20:20:57.19:798,57,0	1/1:2,24:26:69.23:966,69,0	1/1:0,14:14:39.13:546,39,0	1/1:3,23:26:72.19:952,72,0	1/1:3,22:25:66.22:924,66,0	1/1:2,23:25:60.20:840,60,0	1/1:1,28:29:81.17:1133,81,0	1/1:1,20:21:50.84:712,51,0	1/1:0,12:12:33.11:462,33,0	1/1:0,22:22:63.21:882,63,0	1/1:1,30:31:87.29:1212,87,0	1/1:1,26:27:78.26:1087,78,0	1/1:3,9:12:27.09:378,27,0
chr10	21996896	.	ATGTGTGTGTGTGTGTGTG	A	4453.32	PASS	AB=0.767;AC=20;AF=0.357;AN=56;BaseQRankSum=8.185;DP=866;FS=0.000;HRun=0;HaplotypeScore=339.1352;InbreedingCoeff=0.6459;MQ=57.91;MQ0=17;MQRankSum=-4.100;QD=13.06;ReadPosRankSum=0.584;VQSLOD=2.6926;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:45:8.56:0,9,254	0/0:12,0:20:20.99:0,21,756	0/0:37,0:20:6:0,6,51	0/0:50,0:35:9:0,9,108	0/0:24,0:30:57.16:0,57,2772	1/1:15,19:34:6.01:539,6,0	1/1:25,0:25:8.57:235,9,0	0/0:30,0:29:20.97:0,21,417	0/0:19,0:35:33.03:0,33,1432	1/1:17,18:34:35.70:594,36,0	1/1:7,16:25:3.64:32,4,0	1/1:10,24:34:5.51:894,6,0	1/1:9,18:27:26.83:1091,27,0	0/1:10,23:34:51.32:563,0,51	0/0:23,0:28:53.82:0,54,2574	0/0:14,0:31:23.61:0,24,985	0/0:25,0:28:55.01:0,55,2462	0/0:20,0:20:34.62:0,35,1032	0/0:16,0:21:27.08:0,27,939	0/0:17,0:32:11.83:0,12,382	0/0:52,0:50:57.18:0,57,2240	0/0:25,0:25:36.09:0,36,1786	1/1:13,22:35:0.47:1,0,0	1/1:16,17:33:3.01:146,3,0	1/1:8,12:20:5.42:291,5,0	0/1:34,0:36:68.46:68,0,2735	0/0:28,0:30:48.16:0,48,2185	0/0:4,0:5:9.03:0,9,387
chr10	21997443	.	CA	C	2116.43	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=4.797;DP=518;FS=4.715;HRun=2;HaplotypeScore=59.4511;InbreedingCoeff=0.9131;MQ=79.38;MQ0=0;MQRankSum=-1.431;QD=33.59;ReadPosRankSum=1.908;VQSLOD=3.8422;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:51.14:0,51,721	0/0:7,0:7:21.07:0,21,315	0/0:19,1:20:23.98:0,24,592	0/0:2,1:4:4.44:0,4,49	0/0:18,0:18:54.14:0,54,748	0/0:26,0:26:78.26:0,78,1159	0/0:25,0:25:72.24:0,72,1060	0/0:26,0:26:75.25:0,75,1106	0/0:16,0:16:48.16:0,48,719	0/0:15,0:15:45.11:0,45,650	0/0:17,0:17:48.16:0,48,719	0/0:15,0:15:45.15:0,45,674	0/0:21,0:21:63.20:0,63,924	0/0:31,0:31:90.29:0,90,1327	0/0:23,0:23:69.23:0,69,1033	0/0:15,0:15:45.14:0,45,656	0/0:14,0:14:39.13:0,39,580	0/0:12,0:12:36.12:0,36,536	0/0:18,0:18:51.16:0,51,745	0/0:20,0:20:60.19:0,60,879	0/0:25,0:25:72.21:0,72,1032	0/0:21,0:21:60.20:0,60,897	0/0:15,0:15:39.13:0,39,584	0/0:15,0:15:45.11:0,45,637	0/0:18,0:18:54.18:0,54,808	1/1:2,17:19:6.19:577,6,0	1/1:0,32:32:93.30:1207,93,0	1/1:0,12:12:36.12:467,36,0
chr10	21997673	.	AGG	A	11084.66	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=15.877;DP=669;FS=0.000;HRun=2;HaplotypeScore=99.0819;InbreedingCoeff=0.9912;MQ=79.09;MQ0=0;MQRankSum=-2.095;QD=45.80;ReadPosRankSum=2.770;VQSLOD=4.6346;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:60.21:0,60,1201	0/0:16,0:16:48.11:0,48,864	0/0:13,0:13:39.13:0,39,772	0/0:16,0:17:38.86:0,39,850	0/0:33,0:33:99:0,99,1990	1/1:0,31:31:90.31:1469,90,0	1/1:1,19:20:48.16:783,48,0	0/0:32,0:32:96.33:0,96,1944	0/0:25,0:25:75.26:0,75,1512	1/1:0,32:32:96.33:1564,96,0	1/1:0,18:18:48.16:783,48,0	1/1:0,20:20:57.19:928,57,0	1/1:0,28:28:78.26:1250,78,0	1/1:0,24:24:66.23:1077,66,0	0/0:25,0:25:75.26:0,75,1524	0/0:25,0:25:75.26:0,75,1502	0/0:23,0:23:69.24:0,69,1376	0/0:11,0:11:33.11:0,33,670	0/0:23,0:23:69.23:0,69,1340	0/0:45,0:45:99:0,135,2725	0/0:26,0:26:78.27:0,78,1556	0/0:32,0:32:93.30:0,93,1853	1/1:0,33:33:93.32:1517,93,0	1/1:0,11:11:30.10:489,30,0	1/1:0,25:25:75.26:1224,75,0	0/0:25,1:26:29.30:0,29,1463	0/0:30,0:30:90.31:0,90,1817	0/0:4,0:4:9.03:0,9,183
chr10	22001294	.	AT	A	5508.19	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-6.072;DP=553;FS=2.429;HRun=7;HaplotypeScore=83.1940;InbreedingCoeff=0.9560;MQ=74.07;MQ0=0;MQRankSum=0.416;QD=25.98;ReadPosRankSum=2.273;VQSLOD=5.5419;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:30.10:0,30,377	0/0:0,0:11:28.41:0,28,145	0/0:13,0:13:1.27:0,1,167	0/0:9,0:8:11.11:0,11,94	0/0:29,0:29:75.24:0,75,942	1/1:1,20:21:57.13:582,57,0	1/1:1,12:13:30.07:306,30,0	0/0:4,0:31:71.04:0,71,368	0/0:2,0:25:56.88:0,57,290	1/1:1,35:36:99:1071,105,0	1/1:2,28:30:78.17:795,78,0	1/1:1,19:20:51.12:520,51,0	1/1:3,15:18:39.09:398,39,0	1/1:0,21:21:51.12:520,51,0	0/0:23,0:23:60.19:0,60,755	0/0:2,0:19:40.20:0,40,213	0/0:0,0:21:53.97:0,54,275	0/0:2,0:21:54.46:0,54,311	0/0:1,0:14:33.47:0,33,172	0/0:2,0:32:79.18:0,79,407	0/0:1,0:5:14.16:0,14,71	0/0:23,0:23:69.22:0,69,867	1/1:2,20:22:57.13:582,57,0	1/1:0,5:5:15.03:153,15,0	1/1:1,25:26:57.13:582,57,0	0/0:23,0:23:66.21:0,66,830	0/0:20,0:20:60.19:0,60,751	0/0:10,0:10:30.10:0,30,377
chr10	22003833	.	CTG	C	260.97	PASS	AB=0.950;AC=10;AF=0.185;AN=54;BaseQRankSum=0.718;DP=528;FS=0.000;HRun=0;HaplotypeScore=199.8381;InbreedingCoeff=-0.0438;MQ=43.51;MQ0=27;MQRankSum=-0.359;QD=2.01;ReadPosRankSum=-1.288;VQSLOD=2.2546;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:21:8.82:0,9,88	0/1:8,0:8:29.54:40,0,30	./.	0/0:10,0:4:9.03:0,9,121	0/1:14,4:17:29.22:33,0,29	0/0:24,0:21:44.14:0,44,653	0/0:21,0:17:22.88:0,23,364	0/1:15,0:9:23.97:84,0,24	0/1:12,1:13:45.51:49,0,46	0/0:31,0:26:35.94:0,36,1004	0/0:13,0:11:18.04:0,18,243	0/0:27,0:25:33.64:0,34,457	0/0:26,0:26:46.26:0,46,644	0/0:28,0:24:49.20:0,49,698	0/0:32,0:28:65.89:0,66,778	0/1:23,0:23:17.86:83,0,18	0/1:11,0:10:8.13:8,0,43	0/1:8,0:8:18.31:18,0,54	0/0:9,0:7:13.91:0,14,127	1/1:17,0:13:2.97:23,3,0	0/0:18,0:12:6.02:0,6,86	0/1:14,3:17:9.87:61,0,10	0/0:19,0:16:15.05:0,15,229	0/0:33,0:27:26.98:0,27,377	0/0:21,0:20:41.17:0,41,598	0/0:25,0:23:60.56:0,61,806	0/0:22,0:21:31.66:0,32,417	0/0:9,0:7:15:0,15,190
chr10	22003837	.	CTG	C	203.50	PASS	AB=0.975;AC=11;AF=0.204;AN=54;BaseQRankSum=0.903;DP=528;FS=7.297;HRun=0;HaplotypeScore=215.0664;InbreedingCoeff=-0.0975;MQ=41.15;MQ0=27;MQRankSum=-1.243;QD=1.31;ReadPosRankSum=-1.199;VQSLOD=1.7255;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:22,5:21:34.06:37,0,34	0/1:9,0:9:22.14:40,0,22	./.	0/0:9,0:3:6.02:0,6,83	0/1:18,0:17:6.02:6,0,37	0/0:24,0:21:45.09:0,45,659	0/0:24,0:17:22.77:0,23,364	0/1:14,0:7:34.25:62,0,34	0/1:13,0:14:27.05:27,0,58	0/0:29,0:24:65.82:0,66,968	0/0:10,0:8:12.03:0,12,168	0/0:29,0:27:38.63:0,39,552	0/0:26,0:26:47.99:0,48,650	0/0:26,0:22:47.95:0,48,715	0/0:33,0:28:71.83:0,72,822	0/1:24,0:24:21.51:61,0,22	0/1:11,0:10:8.98:9,0,51	0/1:7,0:7:20.71:21,0,55	0/0:11,0:10:21.36:0,21,158	1/1:15,0:11:2.97:23,3,0	0/0:18,0:12:6.02:0,6,86	0/1:16,0:16:46.67:59,0,47	0/0:21,0:18:17.09:0,17,235	0/0:33,0:27:26.21:0,26,358	0/0:20,0:19:39.96:0,40,544	0/0:27,0:25:68.65:0,69,926	0/0:23,0:22:31.61:0,32,394	0/0:9,0:7:12.04:0,12,171
chr10	22003849	.	CTG	C	296.42	PASS	AB=0.989;AC=19;AF=0.352;AN=54;BaseQRankSum=2.380;DP=537;FS=15.771;HRun=0;HaplotypeScore=234.4503;InbreedingCoeff=-0.2716;MQ=38.93;MQ0=28;MQRankSum=-0.859;QD=0.91;ReadPosRankSum=-2.568;VQSLOD=0.9094;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:25:2.49:0,2,13	1/1:8,0:8:5.87:49,6,0	./.	0/0:1,0:1:0.47:0,0,1	0/0:17,2:18:2.54:0,3,10	0/1:21,1:19:14.60:15,0,252	0/1:27,0:20:25:25,0,107	0/0:21,0:12:28.92:0,29,388	0/1:13,0:13:10.94:26,0,11	0/0:27,0:22:26.72:0,27,557	0/0:7,0:5:5.99:0,6,64	0/0:32,0:30:46.98:0,47,539	0/1:23,0:23:11.24:11,0,377	0/0:21,0:17:23:0,23,272	0/0:33,0:28:44.96:0,45,502	0/1:24,0:24:25.30:25,0,43	0/1:11,0:10:9.91:10,0,40	0/1:7,0:7:13.37:13,0,75	0/1:18,0:15:90.71:91,0,175	1/1:17,0:13:0.72:2,1,0	0/0:20,0:14:6.02:0,6,86	0/1:15,0:15:2.92:3,0,4	0/1:25,0:22:22.87:23,0,211	0/1:36,0:30:23.22:23,0,188	0/1:21,0:20:33.35:33,0,250	0/1:24,1:23:60.35:60,0,301	0/1:22,2:23:26.50:26,0,164	0/1:8,0:6:4.12:4,0,67
chr10	22003853	.	CTG	C	447.24	PASS	AB=0.986;AC=23;AF=0.426;AN=54;BaseQRankSum=2.581;DP=542;FS=6.148;HRun=0;HaplotypeScore=236.5238;InbreedingCoeff=-0.0731;MQ=38.03;MQ0=27;MQRankSum=-1.555;QD=1.26;ReadPosRankSum=-2.331;VQSLOD=1.7577;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:29,2:25:2.74:31,3,0	1/1:6,0:6:2.88:26,3,0	./.	0/0:4,0:1:0.47:0,0,1	1/1:21,0:20:6.01:62,6,0	0/0:20,1:18:0.06:0,0,142	0/1:25,0:18:2.01:2,0,82	0/0:27,0:19:53.67:0,54,584	0/1:13,0:13:10.47:10,0,13	0/0:30,0:25:30.38:0,30,396	0/0:7,0:5:5.93:0,6,40	0/0:33,0:31:41.72:0,42,310	0/0:22,0:22:9.91:0,10,214	0/0:25,0:21:23.57:0,24,158	0/1:29,2:26:90.76:91,0,405	0/1:23,0:23:24.76:25,0,33	0/1:12,0:11:9.91:10,0,40	0/1:8,0:8:11.14:11,0,67	0/1:18,0:15:95.52:96,0,164	1/1:17,0:13:0.72:2,1,0	0/0:19,0:13:6.02:0,6,80	1/1:13,2:15:9.02:90,9,0	0/1:23,0:20:1.08:1,0,103	0/1:34,0:28:0.49:0,0,105	0/1:20,0:19:32.46:32,0,200	0/1:23,1:22:69.31:69,0,223	0/1:22,2:23:29.89:30,0,79	0/1:9,0:7:5.18:5,0,42
chr10	22003857	.	CTG	C	2489.15	PASS	AB=0.966;AC=31;AF=0.574;AN=54;BaseQRankSum=-0.532;DP=555;FS=3.836;HRun=0;HaplotypeScore=233.0316;InbreedingCoeff=-0.3710;MQ=38.22;MQ0=27;MQRankSum=3.065;QD=4.96;ReadPosRankSum=-2.139;VQSLOD=2.9140;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:28,1:24:2.74:31,3,0	1/1:7,0:6:2.88:26,3,0	./.	0/0:5,0:1:0.47:0,0,1	1/1:21,0:20:6.01:61,6,0	0/1:20,3:20:19.44:229,0,19	0/1:27,0:20:16.06:124,0,16	0/0:27,0:19:40.33:0,40,381	1/1:13,0:13:3.91:32,4,0	0/1:32,0:27:99:183,0,102	0/1:8,0:6:12.49:49,0,12	0/1:27,8:33:57.81:408,0,58	0/1:21,3:24:69.54:286,0,70	0/1:23,2:21:31.75:210,0,32	0/1:33,0:28:99:125,0,242	0/1:23,0:23:0.53:39,0,1	0/1:12,0:11:10.99:11,0,16	0/1:7,0:7:13.58:14,0,24	0/1:18,0:15:98.93:99,0,99	1/1:19,0:15:0.72:2,1,0	0/0:20,0:14:5.93:0,6,59	1/1:14,0:14:9.02:90,9,0	1/1:19,4:20:2.67:173,3,0	0/1:33,0:27:3.03:160,0,3	0/1:17,2:18:64.92:186,0,65	0/1:24,0:22:45.38:45,0,148	0/1:24,0:23:39.05:46,0,39	0/1:9,0:7:5.24:5,0,40
chr10	22003861	.	CTG	C	3497.98	PASS	AB=0.991;AC=34;AF=0.630;AN=54;BaseQRankSum=-5.339;DP=573;FS=6.452;HRun=0;HaplotypeScore=233.2969;InbreedingCoeff=-0.2431;MQ=38.21;MQ0=27;MQRankSum=3.679;QD=6.51;ReadPosRankSum=-1.388;VQSLOD=2.4977;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:24:2.74:31,3,0	1/1:8,0:7:5.41:37,5,0	./.	0/0:5,0:1:0.47:0,0,1	1/1:23,0:22:6.01:61,6,0	0/1:25,0:22:21.66:219,0,22	0/1:26,0:19:16.59:123,0,17	1/1:26,6:24:12.81:283,13,0	1/1:13,1:14:9.38:85,9,0	0/1:29,0:24:99:161,0,141	0/1:9,0:7:12.80:71,0,13	0/1:37,0:35:24.78:437,0,25	0/1:27,0:27:75.69:284,0,76	0/1:26,0:22:35.12:209,0,35	1/1:34,0:29:12.22:460,12,0	1/1:21,2:23:2.77:68,3,0	1/1:10,1:10:0.03:14,0,0	0/1:6,1:7:5.93:61,0,6	0/1:19,0:16:3.12:124,0,3	1/1:20,0:17:6.88:34,7,0	0/0:21,0:15:3.01:0,3,36	1/1:14,0:14:9.02:90,9,0	0/1:23,0:20:2.37:155,0,2	0/1:35,0:29:1.77:159,0,2	0/1:18,0:17:43.07:168,0,43	0/1:22,0:20:66.30:66,0,70	0/1:25,0:24:24.52:97,0,25	0/0:9,0:7:10.75:0,11,55
chr10	22003863	.	GTC	G	352.27	PASS	AB=0.978;AC=24;AF=0.444;AN=54;BaseQRankSum=0.728;DP=577;FS=0.529;HRun=0;HaplotypeScore=242.2501;InbreedingCoeff=-0.0350;MQ=38.48;MQ0=26;MQRankSum=5.011;QD=0.81;ReadPosRankSum=3.075;VQSLOD=2.4530;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:31,0:25:1.55:6,2,0	0/0:8,0:7:5.86:0,6,38	./.	0/0:5,0:1:0.89:0,1,2	1/1:21,0:20:3.63:11,4,0	0/1:23,1:22:15.60:16,0,18	0/1:24,3:20:9.39:9,0,14	0/1:38,0:30:87.40:87,0,218	0/1:14,0:14:9.19:9,0,32	0/1:30,0:25:37.80:38,0,151	1/1:9,0:7:3.63:9,4,0	1/1:38,0:36:10.16:79,10,0	0/1:27,0:27:38.08:38,0,88	0/1:25,1:22:27.48:27,0,55	0/1:33,0:28:46.19:86,0,46	0/1:22,0:22:3.40:3,0,42	0/0:9,0:8:4.55:0,5,28	0/1:5,0:5:9.12:9,0,36	0/0:21,0:19:14.41:0,14,67	0/0:21,0:18:6.36:0,6,28	0/0:21,0:15:3.01:0,3,33	0/1:14,0:14:3.88:6,0,4	1/1:22,0:19:9.88:27,10,0	1/1:34,1:29:11.97:35,12,0	0/1:17,1:17:9.86:10,0,16	0/0:24,0:22:42.48:0,42,400	0/0:24,0:23:0.80:0,1,199	0/0:8,0:6:12.03:0,12,136
chr10	22003873	.	C	CTG	5289.19	PASS	AB=1.000;AC=27;AF=0.482;AN=56;BaseQRankSum=-3.063;DP=616;FS=0.443;HRun=0;HaplotypeScore=213.4502;InbreedingCoeff=0.4656;MQ=41.28;MQ0=29;MQRankSum=6.296;QD=12.93;ReadPosRankSum=3.520;VQSLOD=4.5405;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:30:5.18:0,5,62	0/1:8,0:7:10.43:10,0,29	0/0:7,0:1:2.88:0,3,15	0/0:22,0:5:2.20:0,2,33	0/1:22,0:21:5.25:5,0,16	1/1:19,8:24:31.26:595,31,0	1/1:14,11:17:20.02:314,20,0	0/1:43,0:36:6.61:7,0,423	0/0:14,0:14:14.20:0,14,75	1/1:33,0:30:10.01:961,10,0	1/1:7,3:9:15:203,15,0	1/1:27,9:34:62.88:979,63,0	1/1:22,7:29:35.69:661,36,0	1/1:15,11:22:19.33:484,19,0	0/1:35,0:30:7.67:8,0,149	0/1:20,0:20:8.34:8,0,57	0/0:8,0:7:8.77:0,9,54	0/1:8,0:8:3.44:3,0,81	0/0:23,0:21:31.95:0,32,188	0/0:22,0:19:5.87:0,6,25	0/0:22,0:17:0.65:0,1,13	0/1:16,0:16:0.57:1,0,55	1/1:14,6:18:19.88:327,20,0	1/1:7,28:29:18.06:320,18,0	1/1:8,7:14:26.08:402,26,0	0/0:24,0:22:47.88:0,48,360	0/0:23,0:23:12.53:0,13,211	0/0:7,0:6:12.02:0,12,127
chr10	22003877	.	C	CTGTCTG	11547.11	PASS	AB=0.944;AC=36;AF=0.643;AN=56;BaseQRankSum=-6.698;DP=634;FS=3.648;HRun=0;HaplotypeScore=222.6348;InbreedingCoeff=0.2652;MQ=44.40;MQ0=28;MQRankSum=7.734;QD=22.82;ReadPosRankSum=5.599;VQSLOD=4.4559;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:29:1.02:50,0,1	1/1:7,0:6:1.11:21,1,0	0/0:11,0:1:3.01:0,3,35	0/0:31,0:12:13.16:0,13,104	1/1:23,0:22:9.48:135,9,0	1/1:27,0:24:8.58:1157,9,0	1/1:26,0:18:23.96:632,24,0	0/0:48,0:42:38.35:0,38,781	0/1:14,0:14:38.28:53,0,38	0/1:6,26:30:99:1736,0,101	1/1:11,0:10:17.76:398,18,0	1/1:33,0:31:63:1826,63,0	1/1:26,0:26:16.94:1284,17,0	1/1:29,0:25:41.35:1055,41,0	0/1:35,0:30:94.39:261,0,94	0/1:20,0:20:15.61:57,0,16	0/0:9,0:8:3.77:0,4,22	0/0:9,0:9:17.15:0,17,150	0/1:22,0:20:99:199,0,221	1/1:24,0:22:9.15:48,9,0	0/0:20,0:16:1.05:0,1,41	1/1:16,0:16:14.48:213,14,0	1/1:21,0:18:20.26:636,20,0	1/1:35,0:29:24.04:657,24,0	1/1:15,0:14:27.08:806,27,0	0/1:24,0:22:13.21:185,0,13	1/1:23,0:23:11.35:127,11,0	0/1:8,0:7:4.58:11,0,5
chr10	22003885	.	GTC	G	1596.94	PASS	AB=0.859;AC=17;AF=0.304;AN=56;BaseQRankSum=-1.469;DP=708;FS=0.471;HRun=0;HaplotypeScore=220.0190;InbreedingCoeff=0.4646;MQ=48.30;MQ0=24;MQRankSum=-3.057;QD=6.34;ReadPosRankSum=-2.236;VQSLOD=2.5542;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:30:17.75:0,18,273	1/1:5,2:6:2.75:24,3,0	0/0:34,0:9:20.80:0,21,276	0/0:51,0:21:15.92:0,16,180	0/0:30,0:29:33.09:0,33,482	0/0:26,1:24:51.17:0,51,777	0/0:24,2:19:27.98:0,28,415	0/1:26,24:45:20.58:787,0,21	1/1:13,1:14:17.57:180,18,0	0/1:32,0:30:7.36:7,0,750	0/0:13,0:12:24.08:0,24,370	0/0:31,0:30:66.34:0,66,916	0/0:28,0:28:65.58:0,66,851	0/0:30,1:27:56.90:0,57,771	0/1:33,0:28:0.34:0,0,515	1/1:20,0:20:11.51:178,12,0	1/1:11,0:10:6.29:110,6,0	1/1:6,3:9:0.22:41,0,0	0/1:11,12:22:99:344,0,102	1/1:9,19:25:8.23:79,8,0	0/0:8,12:16:3.01:0,3,52	0/0:19,0:19:36.08:0,36,509	0/0:24,0:21:38.56:0,39,545	0/0:36,1:31:33.02:0,33,485	0/0:18,0:17:36.12:0,36,566	0/0:22,2:22:14.53:0,15,721	0/1:24,1:24:14.64:15,0,659	0/0:8,0:7:15.05:0,15,217
chr10	22004594	.	C	CT	5901.14	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-11.853;DP=563;FS=7.375;HRun=8;HaplotypeScore=52.9606;InbreedingCoeff=0.9952;MQ=75.23;MQ0=0;MQRankSum=1.272;QD=27.97;ReadPosRankSum=2.078;VQSLOD=5.4290;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:56.99:0,57,514	0/0:12,0:11:30.01:0,30,274	0/0:15,0:15:32.82:0,33,267	0/0:20,0:19:20.20:0,20,275	0/0:35,1:36:67.03:0,67,805	1/1:1,24:25:60.17:690,60,0	1/1:0,20:20:57.17:658,57,0	0/0:27,0:27:63.03:0,63,576	0/0:16,0:16:33.01:0,33,302	1/1:3,20:23:60.11:665,60,0	1/1:4,10:14:27.08:312,27,0	1/1:2,14:16:45.13:517,45,0	1/1:3,25:29:78.23:897,78,0	1/1:3,15:19:45.09:505,45,0	0/0:19,0:19:29.46:0,29,438	0/0:26,0:26:69.03:0,69,631	0/0:17,0:17:48.02:0,48,439	0/0:7,0:7:18.01:0,18,165	0/0:24,0:24:60.01:0,60,546	0/0:14,0:14:36.01:0,36,329	0/0:15,0:15:45.02:0,45,412	0/0:22,0:22:63.03:0,63,576	1/1:1,22:23:54.16:623,54,0	1/1:2,11:13:33.10:378,33,0	1/1:4,25:29:57.17:658,57,0	0/0:23,0:23:57.03:0,57,522	0/0:33,0:33:90.05:0,90,823	0/0:5,0:5:15.01:0,15,137
chr10	22004830	.	AACACACAC	A	4479.82	PASS	AB=0.833;AC=19;AF=0.365;AN=52;BaseQRankSum=3.549;DP=527;FS=2.808;HRun=0;HaplotypeScore=141.8376;InbreedingCoeff=0.8170;MQ=51.17;MQ0=19;MQRankSum=-6.027;QD=22.18;ReadPosRankSum=2.390;VQSLOD=4.6259;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:21:15.01:0,15,273	0/0:9,0:9:6.02:0,6,198	./.	./.	0/0:16,0:21:15.05:0,15,514	1/1:14,11:25:27.09:597,27,0	0/1:16,3:19:47.10:279,0,47	0/0:33,0:32:38.11:0,38,839	0/0:18,0:18:12.03:0,12,291	1/1:11,11:23:26.34:426,26,0	1/1:9,3:13:15.52:338,16,0	1/1:8,8:17:17.72:431,18,0	1/1:16,4:20:6.48:335,6,0	1/1:12,9:21:21.07:524,21,0	0/0:18,0:29:24.05:0,24,602	0/0:15,0:15:6.02:0,6,142	0/0:16,0:15:18.03:0,18,457	0/0:12,0:11:27.07:0,27,706	0/0:13,0:12:9.02:0,9,200	0/0:18,0:17:9.03:0,9,260	0/0:20,0:19:15.02:0,15,415	0/0:10,0:17:12.03:0,12,358	1/1:11,14:23:24.07:601,24,0	1/1:5,9:16:21.07:457,21,0	1/1:9,10:19:10.52:493,11,0	0/0:26,0:26:28.32:0,28,658	0/0:19,0:19:15.05:0,15,448	0/0:7,0:7:18.02:0,18,500
chr10	22006334	.	C	CTTT	1956.71	PASS	AB=0.633;AC=35;AF=0.625;AN=56;BaseQRankSum=-5.472;DP=556;FS=3.839;HRun=15;HaplotypeScore=97.9996;InbreedingCoeff=0.3601;MQ=73.48;MQ0=2;MQRankSum=1.799;QD=4.46;ReadPosRankSum=-1.257;VQSLOD=-0.1624;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:3,0:17:25.98:0,26,152	1/1:3,0:8:3.74:9,4,0	0/0:27,0:15:5.09:0,5,48	0/0:16,0:14:5.40:0,5,49	0/0:3,0:24:42.68:0,43,241	1/1:7,0:23:9.22:37,9,0	0/1:5,0:9:0.06:0,0,24	1/1:14,0:25:22.50:133,22,0	1/1:3,0:12:6.23:14,6,0	1/1:9,0:25:2.99:131,3,0	1/1:12,0:24:11.01:40,11,0	0/1:6,0:18:10.62:11,0,28	1/1:3,0:15:6.44:16,6,0	0/1:3,0:16:3.72:4,0,20	0/0:4,0:20:33.55:0,34,214	0/1:8,0:24:24.54:25,0,41	0/1:16,0:26:59.84:114,0,60	0/1:6,0:18:31.19:31,0,41	0/1:7,0:22:0.95:107,0,1	1/1:8,0:30:23.05:103,23,0	0/1:6,0:14:0.44:0,0,24	0/0:5,0:12:20.31:0,20,120	1/1:4,0:16:10.89:40,11,0	1/1:3,0:11:11.39:63,11,0	0/1:10,0:19:2.86:137,0,3	1/1:11,9:27:41.77:441,42,0	1/1:7,22:34:27.50:366,27,0	1/1:14,2:19:32.84:314,33,0
chr10	22010556	.	G	GA	2692.16	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-6.791;DP=655;FS=3.716;HRun=0;HaplotypeScore=63.3836;InbreedingCoeff=0.9794;MQ=72.99;MQ0=1;MQRankSum=-0.566;QD=43.42;ReadPosRankSum=-0.369;VQSLOD=3.9642;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:78.26:0,78,1090	0/0:13,0:13:39.13:0,39,544	0/0:23,0:21:9.18:0,9,731	0/0:12,0:11:27.07:0,27,350	0/0:28,0:28:84.23:0,84,1137	0/0:20,0:20:57.19:0,57,797	0/0:16,0:16:45.15:0,45,628	0/0:32,0:32:96.30:0,96,1294	0/0:20,0:20:57.19:0,57,795	0/0:26,0:26:78.26:0,78,1089	0/0:21,0:21:57.18:0,57,776	0/0:19,0:19:57.08:0,57,771	0/0:21,0:21:60.20:0,60,839	0/0:21,0:21:63.21:0,63,878	0/0:30,0:30:90.29:0,90,1237	0/0:16,0:16:48.16:0,48,671	0/0:45,0:45:99:0,135,1862	0/0:36,0:36:96.32:0,96,1342	0/0:13,0:13:39.13:0,39,545	0/0:26,0:26:75.25:0,75,1044	0/0:37,0:37:99:0,111,1533	0/0:19,0:19:51.16:0,51,695	0/0:16,0:16:45.12:0,45,608	0/0:31,0:31:87.29:0,87,1211	0/0:24,0:24:72.24:0,72,1006	1/1:1,33:34:60.39:1541,60,0	1/1:0,19:19:57.19:911,57,0	1/1:2,7:9:27.06:383,27,0
chr10	22010637	.	GAA	G	5563.37	PASS	AB=0.611;AC=48;AF=0.857;AN=56;BaseQRankSum=-0.240;DP=594;FS=11.977;HRun=16;HaplotypeScore=120.3857;InbreedingCoeff=0.3424;MQ=59.43;MQ0=12;MQRankSum=-0.357;QD=9.97;ReadPosRankSum=6.047;VQSLOD=2.0985;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,40:49:84.04:811,84,0	1/1:5,0:12:11.61:32,12,0	0/0:20,0:9:4.71:0,5,56	0/0:15,0:6:10.64:0,11,99	1/1:9,18:25:31.53:273,32,0	1/1:7,15:22:40.42:329,40,0	1/1:8,11:19:23.73:200,24,0	1/1:7,0:25:5.50:47,6,0	0/1:6,0:17:10.46:10,0,12	1/1:3,23:27:68.57:563,69,0	1/1:8,7:14:17.87:150,18,0	1/1:6,11:18:32.50:262,32,0	1/1:6,17:23:40.60:349,41,0	1/1:1,12:13:29.84:250,30,0	1/1:7,12:21:27.48:228,27,0	1/1:5,0:19:23.62:65,24,0	1/1:6,0:34:22.28:72,22,0	0/1:9,0:31:38.93:39,0,39	0/1:7,1:16:18.18:40,0,18	0/1:10,0:25:7.79:8,0,76	1/1:7,0:16:4.03:19,4,0	1/1:7,16:23:17.16:170,17,0	1/1:2,12:15:28.12:229,28,0	1/1:3,12:16:34.45:280,34,0	1/1:6,17:22:44.52:361,45,0	1/1:5,12:18:37.16:304,37,0	1/1:8,16:23:47.58:397,48,0	1/1:3,3:4:8.97:75,9,0
chr10	22011540	.	G	GT	15264.21	PASS	AB=1.000;AC=53;AF=0.946;AN=56;BaseQRankSum=-4.614;DP=540;FS=1.325;HRun=6;HaplotypeScore=55.6023;InbreedingCoeff=0.6874;MQ=64.63;MQ0=0;MQRankSum=-2.999;QD=28.85;ReadPosRankSum=2.443;VQSLOD=5.5041;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,36:38:96.31:1206,96,0	1/1:1,4:5:12.04:151,12,0	0/0:11,0:10:20.79:0,21,167	0/1:5,0:3:7.67:8,0,32	1/1:2,20:22:57.14:698,57,0	1/1:0,18:18:48.15:603,48,0	1/1:0,8:8:18.06:226,18,0	1/1:2,31:33:93.17:1060,93,0	1/1:0,14:14:33.11:415,33,0	1/1:6,24:29:66.18:802,66,0	1/1:3,17:20:51.12:624,51,0	1/1:0,13:13:36.12:452,36,0	1/1:1,20:21:48.15:603,48,0	1/1:0,14:13:27.09:339,27,0	1/1:3,15:18:42.13:528,42,0	1/1:1,18:19:45.14:566,45,0	1/1:2,28:30:75.24:943,75,0	1/1:1,19:20:45.14:566,45,0	1/1:4,22:26:69.21:852,69,0	1/1:2,30:32:90.10:1073,90,0	1/1:0,10:10:30.10:377,30,0	1/1:1,11:12:27.09:339,27,0	1/1:2,24:26:63.12:771,63,0	1/1:0,12:12:36.12:453,36,0	1/1:3,19:22:48.15:603,48,0	1/1:25,1:26:62.75:502,63,0	1/1:24,1:25:44.82:344,45,0	1/1:10,0:10:20.92:159,21,0
chr10	22011546	.	T	TTAA	3617.12	PASS	AB=1.000;AC=36;AF=0.643;AN=56;BaseQRankSum=2.239;DP=553;FS=13.526;HRun=0;HaplotypeScore=120.1532;InbreedingCoeff=-0.1819;MQ=64.86;MQ0=0;MQRankSum=-2.129;QD=6.67;ReadPosRankSum=11.143;VQSLOD=0.1491;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:41,0:40:43.57:44,0,53	0/1:6,0:6:0.08:0,0,59	0/0:10,0:10:19.89:0,20,304	0/1:5,0:4:2.13:2,0,36	0/1:23,0:23:37.93:38,0,38	1/1:18,0:18:21.53:55,22,0	0/1:10,0:10:3.11:3,0,54	0/1:34,0:34:25.45:154,0,25	1/1:14,0:14:13.71:30,14,0	1/1:25,0:24:30.54:103,31,0	1/1:18,0:18:1.35:40,1,0	0/1:15,0:15:15:15,0,16	0/1:21,0:21:0.71:21,0,1	0/1:14,0:13:10.64:11,0,21	0/1:18,0:18:12.30:12,0,77	0/1:24,0:24:4.61:5,0,156	1/1:28,0:28:31.15:69,31,0	1/1:18,0:18:18.69:41,19,0	0/1:29,0:29:62.09:87,0,62	0/1:34,0:34:53.59:75,0,54	0/1:12,0:12:12.21:12,0,19	0/1:13,0:13:1.47:1,0,112	0/1:28,0:28:35.14:35,0,67	0/1:14,0:14:12.12:12,0,47	0/1:21,0:21:18.08:18,0,43	1/1:1,22:24:67.30:1161,67,0	1/1:1,21:24:44.61:1071,45,0	1/1:0,7:10:21.07:501,21,0
chr10	22011630	.	CGTGTGT	C	6542.47	PASS	AB=0.781;AC=20;AF=0.357;AN=56;BaseQRankSum=6.161;DP=869;FS=15.277;HRun=0;HaplotypeScore=215.2028;InbreedingCoeff=0.7020;MQ=56.49;MQ0=13;MQRankSum=-9.825;QD=20.57;ReadPosRankSum=0.070;VQSLOD=2.7182;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:39:60.82:0,61,832	0/0:11,0:11:24.08:0,24,807	0/1:67,0:23:46.47:46,0,180	0/0:74,0:24:17.65:0,18,342	0/0:10,0:22:50.18:0,50,659	1/1:5,15:19:47.19:975,47,0	0/1:19,18:37:4.33:732,0,4	0/0:39,0:39:72.17:0,72,1892	0/0:24,0:25:51.17:0,51,1608	1/1:18,18:35:74.76:1377,75,0	1/1:5,11:16:18.82:443,19,0	1/1:12,5:16:12.50:220,12,0	1/1:8,14:21:26.16:870,26,0	1/1:4,10:14:20.53:451,21,0	0/0:13,0:26:53.95:0,54,703	0/0:29,0:32:59.56:0,60,1707	0/0:29,0:31:68.43:0,68,1960	0/0:23,0:23:57.15:0,57,1612	0/0:16,0:16:30.09:0,30,797	0/0:21,0:22:48.14:0,48,1343	0/0:123,0:125:99:0,276,8249	0/1:10,0:19:25.45:25,0,539	1/1:12,8:21:21.04:404,21,0	0/1:17,7:23:52.84:197,0,53	1/1:8,15:24:39.13:801,39,0	0/0:26,0:28:69.21:0,69,1931	0/0:19,0:20:57.19:0,57,1717	0/0:5,0:7:18.06:0,18,429
chr10	22011742	.	ATGTGTG	A	4867.67	PASS	AB=0.742;AC=17;AF=0.304;AN=56;BaseQRankSum=4.287;DP=830;FS=18.543;HRun=0;HaplotypeScore=223.1604;InbreedingCoeff=0.7421;MQ=59.04;MQ0=18;MQRankSum=-8.514;QD=15.21;ReadPosRankSum=-6.669;VQSLOD=1.4828;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:37:73.15:0,73,1730	0/1:1,3:4:18.68:94,0,19	0/1:88,0:25:15.01:15,0,365	0/0:96,0:33:20.30:0,20,580	0/0:13,0:28:59.72:0,60,1419	0/0:20,0:20:39.12:0,39,1203	0/0:37,0:40:71.54:0,72,2090	1/1:5,25:29:72.19:1342,72,0	1/1:8,9:17:29.69:369,30,0	0/0:31,0:30:75.20:0,75,2120	0/0:11,0:11:18.04:0,18,417	0/0:24,0:26:57.18:0,57,1655	0/0:25,0:25:57.09:0,57,1793	0/0:28,0:29:56.42:0,56,1677	0/0:26,0:25:60.19:0,60,1766	1/1:10,13:23:38.54:545,39,0	0/1:14,13:26:99:812,0,244	1/1:3,11:13:29.76:477,30,0	1/1:6,13:19:14.48:602,14,0	1/1:0,18:18:38.88:305,39,0	1/1:19,59:76:38.58:307,39,0	0/0:4,0:8:14.94:0,15,399	0/0:16,0:17:29.25:0,29,911	0/0:41,0:41:76.48:0,76,2193	0/0:19,0:19:35.38:0,35,1045	0/0:8,0:25:72.20:0,72,1783	0/0:8,0:18:35.29:0,35,876	0/0:6,0:10:24.04:0,24,562
chr10	22011777	.	C	CTG	2812.79	PASS	AB=0.999;AC=47;AF=0.870;AN=54;BaseQRankSum=0.030;DP=943;FS=10.359;HRun=0;HaplotypeScore=248.4296;InbreedingCoeff=-0.0175;MQ=43.36;MQ0=52;MQRankSum=-0.459;QD=3.38;ReadPosRankSum=-0.287;VQSLOD=1.1232;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:46,0:44:5.76:48,6,0	1/1:3,0:3:3.01:32,3,0	./.	0/1:117,0:25:0:0,0,0	1/1:29,0:28:6.02:72,6,0	1/1:20,0:21:14.51:124,15,0	1/1:32,0:32:0.96:4,1,0	0/1:36,0:35:21.44:21,0,36	0/1:27,0:27:10.55:148,0,11	0/1:30,0:28:6.11:228,0,6	1/1:20,0:20:10.65:120,11,0	1/1:27,2:29:15.01:167,15,0	1/1:28,0:27:9.48:85,9,0	1/1:31,0:30:17.67:234,18,0	0/1:29,0:28:23.78:24,0,57	1/1:30,0:30:30.29:328,30,0	1/1:32,0:31:12:116,12,0	1/1:22,0:19:11.95:95,12,0	1/1:18,0:17:3.89:34,4,0	1/1:32,1:32:21.46:206,21,0	1/1:75,3:75:26.75:333,27,0	0/1:13,0:13:0.42:1,0,0	1/1:15,0:14:6.02:85,6,0	0/1:30,0:30:25.81:26,0,27	1/1:18,0:18:4.63:13,5,0	1/1:30,1:30:20.52:193,21,0	1/1:17,0:17:0.73:116,1,0	1/1:14,0:14:8.99:78,9,0
chr10	22011814	.	T	TGTGTAC	12476.11	PASS	AB=0.582;AC=48;AF=0.857;AN=56;BaseQRankSum=0.212;DP=642;FS=3.476;HRun=0;HaplotypeScore=163.3422;InbreedingCoeff=0.4327;MQ=60.17;MQ0=17;MQRankSum=-4.208;QD=23.90;ReadPosRankSum=3.585;VQSLOD=4.2449;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:20,1:32:36.06:588,36,0	1/1:4,0:5:12.04:206,12,0	0/0:61,0:27:74.02:0,74,1013	0/0:58,0:26:71.82:0,72,921	1/1:7,0:11:24.08:427,24,0	1/1:3,1:23:14.41:299,14,0	0/1:0,10:15:0.02:0,0,0	1/1:30,0:31:17.19:1183,17,0	1/1:16,0:23:13.53:728,14,0	1/1:12,2:18:1.53:838,2,0	1/1:8,2:16:19.73:333,20,0	1/1:17,1:19:41.65:667,42,0	1/1:13,3:18:45.14:734,45,0	1/1:13,1:19:36.10:557,36,0	0/1:15,0:22:66.19:436,0,66	1/1:13,0:26:62.73:1048,63,0	1/1:11,0:17:33.07:462,33,0	1/1:9,2:12:33.11:621,33,0	1/1:10,0:11:19.13:281,19,0	1/1:10,0:17:37.80:593,38,0	1/1:46,0:56:65.83:1022,66,0	1/1:7,0:12:14.77:241,15,0	1/1:6,0:13:6.02:109,6,0	0/1:2,27:34:41.04:48,0,41	1/1:1,16:21:0.15:0,0,0	1/1:10,2:16:34.20:639,34,0	0/1:4,0:16:18.91:229,0,19	1/1:1,0:6:9.02:188,9,0
chr10	22013958	.	TA	T	10996.01	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=12.879;DP=632;FS=0.000;HRun=7;HaplotypeScore=62.8504;InbreedingCoeff=0.9994;MQ=81.41;MQ0=0;MQRankSum=-1.101;QD=26.69;ReadPosRankSum=2.264;VQSLOD=5.5237;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:75.21:0,75,916	1/1:0,11:11:33.08:337,33,0	0/0:25,0:26:43.52:0,44,709	0/0:13,0:13:23.08:0,23,340	0/0:26,0:26:72.22:0,72,895	1/1:1,15:16:45.10:459,45,0	1/1:3,14:17:42.09:426,42,0	1/1:3,29:32:87.16:873,87,0	1/1:2,20:22:54.12:551,54,0	1/1:2,30:32:90.20:915,90,0	1/1:0,20:20:60.14:612,60,0	1/1:0,22:22:63.14:643,63,0	1/1:1,23:24:63.14:643,63,0	1/1:3,26:29:75.17:765,75,0	0/0:33,0:33:90.28:0,90,1121	1/1:2,15:17:42.09:429,42,0	1/1:1,14:15:42.10:428,42,0	1/1:1,11:12:30.07:305,30,0	1/1:8,13:21:39.08:397,39,0	1/1:1,28:29:69.14:704,69,0	1/1:0,19:19:51.12:520,51,0	0/0:23,0:23:63.20:0,63,792	1/1:4,28:32:78.05:796,78,0	1/1:1,14:15:42.09:429,42,0	1/1:1,26:27:75.17:765,75,0	0/0:21,0:21:60.18:0,60,745	0/0:33,0:33:84.24:0,84,1041	0/0:15,0:15:39.12:0,39,491
chr10	22019427	.	TA	T	282.18	PASS	AB=0.786;AC=14;AF=0.318;AN=44;BaseQRankSum=2.082;DP=150;FS=0.000;HRun=10;HaplotypeScore=18.9943;InbreedingCoeff=0.4511;MQ=55.60;MQ0=31;MQRankSum=0.648;QD=7.84;ReadPosRankSum=3.120;VQSLOD=-0.1913;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:3,0:1:2.98:0,3,21	0/0:1,0:1:2.60:0,3,10	0/1:3,1:4:20.05:20,0,24	0/0:3,0:2:5.99:0,6,53	./.	1/1:2,4:6:11.99:104,12,0	./.	0/0:23,0:20:48.10:0,48,508	0/0:3,0:1:2.99:0,3,24	./.	./.	1/1:1,3:4:9:78,9,0	1/1:3,1:2:2.99:26,3,0	1/1:2,2:3:3:26,3,0	0/0:2,0:2:5.68:0,6,28	0/0:2,0:1:3.01:0,3,33	0/0:15,0:12:30.04:0,30,318	0/0:15,0:14:42.07:0,42,447	0/0:6,0:6:18.05:0,18,199	./.	0/0:10,0:7:21.03:0,21,219	0/0:4,0:1:2.88:0,3,15	./.	1/1:0,3:3:9:78,9,0	1/1:1,3:3:9:78,9,0	0/1:3,1:3:17.37:17,0,20	0/0:6,0:4:2.97:0,3,20	0/0:5,0:9:11.43:0,11,58
chr10	22021845	.	GA	G	4085.43	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=11.046;DP=644;FS=2.477;HRun=9;HaplotypeScore=66.4553;InbreedingCoeff=0.9864;MQ=74.18;MQ0=0;MQRankSum=-0.342;QD=22.82;ReadPosRankSum=-1.421;VQSLOD=4.0853;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:81.24:0,81,935	1/1:0,11:11:30.02:274,30,0	0/0:18,0:18:26.74:0,27,273	0/0:8,0:8:9.50:0,9,80	0/0:32,0:32:84.23:0,84,957	0/0:18,0:18:48.14:0,48,554	0/0:20,0:20:42.11:0,42,474	1/1:4,28:32:81.03:737,81,0	1/1:0,22:22:63.03:577,63,0	0/0:33,0:33:84.25:0,84,965	0/0:27,0:27:75.22:0,75,866	0/0:27,0:27:75.19:0,75,851	0/0:30,0:30:81.20:0,81,913	0/0:23,0:23:63.18:0,63,717	0/0:29,0:29:84.24:0,84,960	1/1:2,23:25:60.03:549,60,0	1/1:4,22:26:57.02:522,57,0	1/1:1,8:9:24.01:220,24,0	1/1:4,13:17:39.01:357,39,0	1/1:2,19:21:54.03:494,54,0	1/1:2,14:16:39.02:357,39,0	0/0:27,0:27:75.05:0,75,845	0/0:19,0:19:45.13:0,45,519	0/0:35,0:35:96.27:0,96,1098	0/0:19,0:19:45.08:0,45,496	0/0:25,0:25:63.18:0,63,719	0/0:39,0:40:99:0,111,1260	0/0:5,0:5:12.04:0,12,138
chr10	22023569	.	TCACACACACACACACACA	T	5972.96	PASS	AB=0.896;AC=16;AF=0.308;AN=52;BaseQRankSum=3.317;DP=563;FS=6.489;HRun=0;HaplotypeScore=268.0008;InbreedingCoeff=0.5554;MQ=68.19;MQ0=14;MQRankSum=-5.286;QD=27.15;ReadPosRankSum=0.201;VQSLOD=2.6644;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:20:6.02:0,6,96	0/0:6,0:13:17.85:0,18,416	./.	0/0:32,0:26:3.01:0,3,40	0/0:23,0:24:17.94:0,18,367	1/1:13,5:19:15.05:670,15,0	1/1:18,2:19:6.02:290,6,0	0/0:25,0:25:27.05:0,27,483	0/0:11,0:24:23.33:0,23,822	0/1:22,0:20:99:302,0,191	0/1:11,4:16:0:0,0,0	0/1:18,4:23:21.57:944,0,22	1/1:13,8:22:24.08:1154,24,0	1/1:16,14:30:27.09:1300,27,0	0/0:22,0:22:24.08:0,24,863	0/0:23,0:31:21.07:0,21,609	0/0:11,0:9:14.70:0,15,305	0/0:5,0:6:4.51:0,5,23	0/0:9,0:12:9:0,9,192	0/0:10,0:10:9.03:0,9,206	0/0:14,0:19:9.01:0,9,158	0/0:13,0:14:9.01:0,9,165	1/1:9,7:16:12.04:580,12,0	./.	1/1:12,7:21:9.37:717,9,0	0/1:30,0:27:15.95:16,0,2011	0/0:27,0:26:36.12:0,36,1823	0/0:8,0:8:12.04:0,12,715
chr10	22023614	.	CACACACAG	C	3012.32	PASS	AB=1.000;AC=22;AF=0.393;AN=56;BaseQRankSum=8.052;DP=657;FS=19.889;HRun=0;HaplotypeScore=234.4417;InbreedingCoeff=-0.0962;MQ=51.22;MQ0=29;MQRankSum=-3.190;QD=7.24;ReadPosRankSum=3.837;VQSLOD=0.8246;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:29:18.51:168,19,0	0/1:11,0:11:28.91:170,0,29	0/0:14,0:7:19.95:0,20,151	0/0:18,0:10:20.11:0,20,215	1/1:24,1:25:53.87:496,54,0	0/1:20,0:19:99:144,0,199	0/1:23,0:18:40.17:40,0,207	0/0:38,0:35:39.77:0,40,484	0/1:35,0:35:99:165,0,377	0/0:32,0:28:75.17:0,75,683	0/0:26,0:26:38.29:0,38,306	0/1:19,0:19:99:195,0,191	0/1:21,0:21:99:314,0,118	0/1:29,0:28:99:282,0,214	1/1:24,0:24:13.83:311,14,0	0/1:27,0:26:15.34:15,0,396	0/0:26,0:21:10.47:0,10,259	0/0:11,0:11:29.61:0,30,203	0/1:11,0:11:63.23:134,0,63	0/1:25,0:24:16.12:16,0,419	0/0:35,0:29:44.95:0,45,393	1/1:5,10:14:3.01:52,3,0	0/1:22,0:21:99:155,0,193	0/1:20,0:18:2.76:3,0,129	0/1:24,0:24:99:149,0,184	0/1:35,0:33:99:377,0,437	0/0:28,0:25:15.76:0,16,336	0/0:13,0:13:0.26:0,0,235
chr10	22023620	.	CAG	C	1653.13	PASS	AB=0.906;AC=16;AF=0.286;AN=56;BaseQRankSum=1.762;DP=715;FS=6.233;HRun=0;HaplotypeScore=196.5415;InbreedingCoeff=0.6354;MQ=52.82;MQ0=30;MQRankSum=3.833;QD=7.03;ReadPosRankSum=1.119;VQSLOD=2.8798;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:32,0:31:34.78:245,35,0	0/1:11,0:11:12.76:13,0,46	0/0:20,0:12:14.57:0,15,231	0/0:20,0:12:23.11:0,23,239	1/1:28,0:28:59.62:463,60,0	0/0:22,0:21:41.21:0,41,289	0/0:26,0:21:42.01:0,42,325	0/0:45,0:42:61.21:0,61,696	0/0:39,0:39:72.88:0,73,544	0/0:36,0:32:66.21:0,66,673	0/0:29,0:29:44.17:0,44,356	0/0:21,0:21:31.39:0,31,262	0/1:24,0:24:9.01:9,0,173	0/0:31,0:30:52.55:0,53,358	1/1:23,0:23:53.14:409,53,0	0/0:30,0:29:63.19:0,63,494	0/0:24,0:20:42.56:0,43,306	0/0:11,0:11:26.62:0,27,180	0/0:16,0:15:25.45:0,25,187	0/0:28,0:27:49.43:0,49,491	0/0:37,0:32:53.29:0,53,430	1/1:16,0:15:2.04:6,2,0	0/1:23,0:22:4.53:5,0,235	0/0:21,0:19:0.23:0,0,150	0/0:24,0:24:35.26:0,35,247	1/1:10,27:35:48.37:541,48,0	1/1:8,17:23:11.98:125,12,0	0/1:6,9:15:2.47:17,0,2
chr10	22026263	.	CA	C	11674.11	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=6.030;DP=588;FS=10.536;HRun=8;HaplotypeScore=71.6840;InbreedingCoeff=0.9988;MQ=78.71;MQ0=0;MQRankSum=-2.116;QD=24.84;ReadPosRankSum=1.555;VQSLOD=5.2681;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:67.41:0,67,764	1/1:0,11:11:27.01:253,27,0	0/0:14,0:14:36.09:0,36,394	0/0:16,0:16:22.67:0,23,210	0/0:24,0:24:62.97:0,63,705	1/1:3,11:14:33:309,33,0	1/1:1,19:20:54.09:522,54,0	1/1:3,33:36:99:956,99,0	1/1:3,16:19:42.06:406,42,0	1/1:0,25:25:75.12:724,75,0	1/1:2,21:23:53.94:499,54,0	1/1:2,15:17:39.06:377,39,0	1/1:2,22:24:66.11:637,66,0	1/1:2,15:17:42.07:406,42,0	0/0:23,0:23:60.10:0,60,695	1/1:0,18:19:53.12:499,53,0	1/1:1,22:23:60.10:579,60,0	1/1:3,13:16:36.06:348,36,0	1/1:2,32:34:96.11:915,96,0	1/1:4,21:25:60.09:579,60,0	1/1:4,22:26:66.10:637,66,0	0/0:16,0:16:39.12:0,39,471	1/1:1,17:18:36.04:348,36,0	1/1:0,16:16:48.08:464,48,0	1/1:0,18:18:45.07:434,45,0	1/1:5,17:22:51.02:478,51,0	1/1:1,37:38:99:1044,111,0	1/1:0,9:9:27.04:261,27,0
chr10	22026765	.	TG	T	12397.51	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=4.333;DP=594;FS=2.059;HRun=6;HaplotypeScore=60.4993;InbreedingCoeff=0.9865;MQ=95.82;MQ0=0;MQRankSum=-6.651;QD=28.37;ReadPosRankSum=3.110;VQSLOD=5.6083;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,111,1427	1/1:1,13:14:39.10:419,39,0	0/0:27,0:27:80.62:0,81,1030	0/0:30,0:30:72.20:0,72,921	0/0:17,0:17:45.15:0,45,592	1/1:0,9:9:21.05:226,21,0	1/1:2,27:29:78.19:838,78,0	1/1:6,27:33:81.16:852,81,0	1/1:2,19:21:54.14:580,54,0	1/1:2,16:18:48.10:507,48,0	1/1:1,3:4:9.02:97,9,0	1/1:1,20:21:57.14:613,57,0	1/1:0,18:18:51.13:548,51,0	1/1:1,24:25:66.17:709,66,0	0/0:27,0:27:75.24:0,75,974	1/1:0,18:18:54.14:580,54,0	1/1:4,23:27:54.14:580,54,0	1/1:1,7:8:21.05:226,21,0	1/1:2,20:22:54.13:575,54,0	1/1:1,19:20:54.14:580,54,0	1/1:0,20:20:60.15:645,60,0	0/0:18,0:18:54.16:0,54,694	1/1:0,21:21:60.15:642,60,0	1/1:0,31:31:81.20:871,81,0	1/1:3,15:18:45.11:484,45,0	1/1:3,14:17:42.08:442,42,0	1/1:0,33:33:99:1064,99,0	1/1:1,9:10:30.07:320,30,0
chr10	22027783	.	T	TA	13729.98	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=4.204;DP=581;FS=5.016;HRun=6;HaplotypeScore=147.3986;InbreedingCoeff=0.9925;MQ=63.62;MQ0=1;MQRankSum=-4.846;QD=31.06;ReadPosRankSum=1.096;VQSLOD=2.7699;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:84.19:0,84,856	1/1:1,9:10:24.08:302,24,0	0/0:17,0:14:28.26:0,28,260	0/0:21,0:18:48:0,48,458	0/0:27,0:27:51.09:0,51,520	1/1:5,21:26:63.18:776,63,0	1/1:4,16:20:42.01:475,42,0	1/1:6,30:36:90.27:1118,90,0	1/1:1,21:22:63.20:789,63,0	1/1:4,27:31:87.26:1077,87,0	1/1:2,20:22:60.19:743,60,0	1/1:4,14:18:42.08:496,42,0	1/1:1,21:22:60.16:734,60,0	1/1:3,24:27:66.17:812,66,0	0/0:18,0:18:45.10:0,45,459	1/1:0,15:15:42.13:528,42,0	1/1:1,25:26:74.99:836,75,0	1/1:2,10:12:30.09:370,30,0	1/1:1,9:10:24.08:302,24,0	1/1:8,14:22:42.13:528,42,0	1/1:1,14:15:30.89:338,31,0	0/0:20,0:20:51.11:0,51,520	1/1:2,26:28:81.21:985,81,0	1/1:1,18:19:42.01:475,42,0	1/1:2,18:20:54.13:661,54,0	1/1:0,20:20:60.18:742,60,0	1/1:3,14:17:41.83:510,42,0	1/1:0,4:4:12:133,12,0
chr10	22027802	.	G	GCA	2044.27	PASS	AB=0.762;AC=7;AF=0.125;AN=56;BaseQRankSum=-10.131;DP=522;FS=1.180;HRun=0;HaplotypeScore=185.9532;InbreedingCoeff=0.4848;MQ=51.89;MQ0=5;MQRankSum=6.722;QD=15.73;ReadPosRankSum=1.664;VQSLOD=3.6107;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:21,21:42:99:467,0,261	0/0:9,0:9:18.98:0,19,131	0/0:11,0:6:8.82:0,9,83	0/0:21,0:14:18.05:0,18,202	1/1:3,25:29:45.15:719,45,0	0/0:16,0:16:35.72:0,36,309	0/0:25,0:24:27.85:0,28,216	0/0:25,0:25:35.23:0,35,403	0/0:21,0:21:38.48:0,38,302	0/0:24,0:24:46.91:0,47,399	0/0:21,0:21:50.24:0,50,432	0/0:17,0:17:23.56:0,24,182	0/0:16,0:17:27.91:0,28,286	0/0:20,0:22:32.63:0,33,272	0/1:7,11:18:46.41:351,0,46	0/0:12,0:12:23.71:0,24,183	0/0:23,0:26:21.81:0,22,242	0/0:13,0:13:20.24:0,20,168	0/0:16,0:14:23.32:0,23,155	0/0:9,0:9:17.75:0,18,128	0/0:11,0:12:13.51:0,14,120	1/1:4,15:19:9.19:636,9,0	0/0:25,0:25:53.10:0,53,412	0/0:19,0:19:26.57:0,27,184	0/0:13,0:13:29.66:0,30,237	0/1:22,0:22:2.77:3,0,290	0/0:12,0:13:32.22:0,32,209	0/0:5,0:5:8.84:0,9,55
chr10	22027814	.	ACACACACG	A	2996	PASS	AB=0.985;AC=23;AF=0.411;AN=56;BaseQRankSum=11.090;DP=558;FS=0.000;HRun=0;HaplotypeScore=243.5659;InbreedingCoeff=-0.5154;MQ=48.29;MQ0=6;MQRankSum=-8.711;QD=7.27;ReadPosRankSum=3.539;VQSLOD=2.2407;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:69.23:0,69,2229	0/1:10,0:10:21.25:95,0,21	0/0:12,0:5:15.01:0,15,190	0/0:22,0:13:36.11:0,36,597	0/0:32,0:32:63.08:0,63,1795	0/1:16,0:16:99:106,0,184	0/1:22,0:21:93.80:94,0,137	0/1:34,0:33:99:122,0,452	0/1:18,1:19:99:223,0,140	0/1:23,0:23:99:150,0,229	0/1:27,0:27:99:149,0,254	0/1:13,0:13:54.84:73,0,55	0/1:21,0:21:70.58:71,0,245	0/1:18,0:18:99:105,0,129	0/0:20,0:20:48:0,48,1187	0/1:17,0:17:37.39:174,0,37	0/1:28,1:29:69.85:229,0,70	0/1:15,0:15:58.05:58,0,74	0/1:16,0:14:75.72:76,0,138	0/1:10,0:10:1.08:97,0,1	0/1:16,0:16:71.05:86,0,71	0/0:20,0:20:54.17:0,54,1600	0/1:24,3:27:99:370,0,187	0/1:19,0:19:21.70:114,0,22	0/1:15,0:15:84.93:175,0,85	0/1:25,0:25:99:263,0,128	0/1:12,2:14:12.72:282,0,13	1/1:6,0:6:8.71:48,9,0
chr10	22027816	.	ACACACG	A	12781.82	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=5.065;DP=565;FS=10.822;HRun=0;HaplotypeScore=195.7281;InbreedingCoeff=0.9648;MQ=49.84;MQ0=6;MQRankSum=-6.697;QD=30.80;ReadPosRankSum=-1.093;VQSLOD=3.3951;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:63.15:0,63,1569	1/1:5,5:10:27.05:477,27,0	0/0:12,0:6:8.98:0,9,75	0/0:24,0:15:24.06:0,24,308	0/0:33,0:33:66.04:0,66,1425	1/1:10,6:16:32.99:502,33,0	1/1:16,7:23:33.06:545,33,0	1/1:33,1:33:57.07:609,57,0	1/1:11,9:20:42.07:717,42,0	1/1:13,10:23:48.05:840,48,0	1/1:16,10:26:50.71:878,51,0	1/1:2,11:13:21:404,21,0	1/1:14,7:21:36.12:658,36,0	1/1:12,7:19:33.01:565,33,0	0/0:21,0:21:45.91:0,46,861	1/1:11,6:17:36.08:598,36,0	1/1:23,7:30:50.55:793,51,0	1/1:10,5:15:11.17:321,11,0	1/1:10,6:14:18.02:301,18,0	1/1:5,5:10:27.07:484,27,0	1/1:15,2:17:23.96:323,24,0	0/0:21,0:21:52.09:0,52,1202	1/1:15,10:25:51.06:882,51,0	1/1:11,8:19:30.15:542,30,0	1/1:8,7:15:30.07:537,30,0	1/1:16,9:25:45.41:980,45,0	1/1:9,5:14:33.57:631,34,0	1/1:1,5:6:9.03:193,9,0
chr10	22027820	.	ACG	A	4091.84	PASS	AB=0.974;AC=24;AF=0.429;AN=56;BaseQRankSum=8.004;DP=557;FS=3.612;HRun=0;HaplotypeScore=183.8211;InbreedingCoeff=-0.4278;MQ=50.15;MQ0=4;MQRankSum=-8.398;QD=9.96;ReadPosRankSum=4.091;VQSLOD=3.2111;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:68.79:0,69,901	0/1:10,0:10:1.77:138,0,2	0/0:10,0:7:17.99:0,18,175	0/0:23,0:14:35.65:0,36,389	0/0:35,0:35:71.96:0,72,692	0/1:16,0:16:99:117,0,119	0/1:21,1:21:64.77:190,0,65	0/1:33,0:32:99:330,0,247	0/1:20,0:20:97.81:200,0,98	0/1:22,0:22:99:251,0,150	0/1:25,1:26:99:246,0,218	0/1:13,0:13:55.44:65,0,55	0/1:20,2:22:99:232,0,153	0/1:18,1:19:99:153,0,104	0/0:22,0:22:52.62:0,53,525	0/1:15,1:16:33.76:165,0,34	0/1:28,0:28:43.42:270,0,43	0/1:13,0:14:51.13:111,0,51	0/1:13,0:11:46.93:110,0,47	1/1:12,0:12:29.06:214,29,0	0/1:17,1:18:60.95:158,0,61	0/0:20,0:20:31.55:0,32,497	0/1:23,1:24:99:206,0,170	0/1:18,1:19:17.64:142,0,18	0/1:16,0:16:85.41:138,0,85	0/1:27,1:28:78.55:449,0,79	0/1:13,1:14:11.40:164,0,11	1/1:6,0:6:8.59:44,9,0
chr10	22028256	.	A	ATT	22165.78	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=13.301;DP=629;FS=0.751;HRun=1;HaplotypeScore=176.4340;InbreedingCoeff=0.9987;MQ=83.61;MQ0=0;MQRankSum=-14.499;QD=45.70;ReadPosRankSum=1.629;VQSLOD=4.8317;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:54.15:0,54,782	1/1:2,10:12:30.02:502,30,0	0/0:26,0:26:63.42:0,63,957	0/0:25,0:25:62.87:0,63,815	0/0:26,0:26:78.25:0,78,1168	1/1:2,14:16:42.03:698,42,0	1/1:6,19:25:54.14:991,54,0	1/1:6,27:33:93.14:1583,93,0	1/1:2,14:16:42.08:736,42,0	1/1:3,26:30:84.24:1565,84,0	1/1:3,18:22:48.04:811,48,0	1/1:5,19:24:57.12:1024,57,0	1/1:2,28:30:69.04:1294,69,0	1/1:3,27:30:69.12:1217,69,0	0/0:24,0:24:72.24:0,72,1101	1/1:1,16:17:51.15:948,51,0	1/1:2,24:26:66.19:1235,66,0	1/1:0,8:8:24.08:464,24,0	1/1:0,18:18:54.19:1026,54,0	1/1:0,27:27:81.01:1333,81,0	1/1:3,10:13:24:386,24,0	0/0:22,0:22:66.22:0,66,1009	1/1:2,13:15:36:581,36,0	1/1:0,19:19:26.87:520,27,0	1/1:3,15:18:51.17:982,51,0	1/1:2,32:34:99:1823,102,0	1/1:5,34:39:96.30:1812,96,0	1/1:0,13:13:33.11:636,33,0
chr10	22029143	.	G	GA	3483.31	PASS	AB=1.000;AC=43;AF=0.768;AN=56;BaseQRankSum=7.304;DP=397;FS=2.411;HRun=9;HaplotypeScore=90.1534;InbreedingCoeff=0.8102;MQ=70.30;MQ0=0;MQRankSum=-3.293;QD=11.09;ReadPosRankSum=1.100;VQSLOD=3.0965;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:7:18:0,18,156	0/1:7,0:7:11.88:35,0,12	0/0:12,0:9:14.90:0,15,125	0/0:15,0:11:5.20:0,5,94	0/0:30,0:31:79.96:0,80,670	1/1:12,0:12:27.48:148,27,0	1/1:6,0:6:12.96:59,13,0	1/1:25,2:27:41.11:224,41,0	1/1:10,0:10:23.01:124,23,0	1/1:19,0:19:41.64:245,42,0	1/1:24,1:25:36.53:283,37,0	1/1:10,1:11:28.01:162,28,0	1/1:17,0:17:7.90:120,8,0	1/1:10,2:12:31.37:197,31,0	0/0:10,0:10:23.98:0,24,208	1/1:11,1:12:34.32:216,34,0	1/1:15,2:17:31.55:200,32,0	1/1:11,0:11:28.27:146,28,0	1/1:10,1:11:22.62:151,23,0	1/1:20,2:22:43.45:245,43,0	1/1:2,0:2:2.22:7,2,0	0/0:8,0:8:17.99:0,18,156	1/1:7,1:8:19.46:115,19,0	1/1:4,1:5:13.77:84,14,0	1/1:15,0:15:30.26:151,30,0	1/1:28,0:28:59.54:333,60,0	1/1:25,1:26:37.29:192,37,0	1/1:11,0:11:8.62:46,9,0
chr10	22029150	.	AAAC	A	10381.71	PASS	AB=0.545;AC=43;AF=0.768;AN=56;BaseQRankSum=8.822;DP=395;FS=0.000;HRun=0;HaplotypeScore=78.7485;InbreedingCoeff=0.8412;MQ=71.74;MQ0=0;MQRankSum=-4.449;QD=33.82;ReadPosRankSum=3.294;VQSLOD=5.3052;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:8:21.05:0,21,401	0/1:1,5:6:18.53:173,0,19	0/0:12,0:9:10.66:0,11,279	0/0:16,0:12:19.64:0,20,252	0/0:35,0:35:99:0,102,1741	1/1:1,10:11:29.89:437,30,0	1/1:0,7:7:15.05:235,15,0	1/1:11,15:26:73.18:901,73,0	1/1:0,8:8:24.08:377,24,0	1/1:0,16:16:48.06:701,48,0	1/1:2,21:23:62.49:835,62,0	1/1:1,11:12:29.59:433,30,0	1/1:3,13:16:37.61:533,38,0	1/1:3,11:14:32.46:449,32,0	0/0:10,0:10:30.09:0,30,567	1/1:1,12:13:35.85:502,36,0	1/1:3,18:21:32.84:456,33,0	1/1:0,11:11:30.10:471,30,0	1/1:2,7:9:25.22:296,25,0	1/1:3,21:24:59.37:771,59,0	1/1:1,1:2:3.01:47,3,0	0/0:7,0:7:21:0,21,396	1/1:1,7:8:20.56:291,21,0	1/1:1,5:6:14.97:206,15,0	1/1:0,16:16:33.11:518,33,0	1/1:0,22:22:66.17:987,66,0	1/1:1,22:23:41.47:621,41,0	1/1:1,12:13:9.03:141,9,0
chr10	22029151	.	AAC	A	4965.30	PASS	AB=1.000;AC=43;AF=0.768;AN=56;BaseQRankSum=10.430;DP=395;FS=8.656;HRun=0;HaplotypeScore=90.6027;InbreedingCoeff=0.7946;MQ=70.68;MQ0=0;MQRankSum=-2.383;QD=16.12;ReadPosRankSum=5.890;VQSLOD=4.1873;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:8:21.05:0,21,328	0/1:6,0:6:20.19:75,0,20	0/0:10,0:8:12.51:0,13,226	0/0:16,0:12:16.15:0,16,215	0/0:35,0:35:99:0,105,1461	1/1:10,1:11:23.69:199,24,0	1/1:7,0:7:14.93:112,15,0	1/1:26,1:27:56.78:544,57,0	1/1:8,0:8:23.91:181,24,0	1/1:16,0:16:47.73:357,48,0	1/1:23,0:23:43.61:357,44,0	1/1:12,0:12:14.63:188,15,0	1/1:15,1:16:35.79:290,36,0	1/1:14,0:14:7.99:179,8,0	0/0:10,0:10:30.09:0,30,477	1/1:13,0:13:16.52:208,17,0	1/1:21,0:21:20.38:195,20,0	1/1:11,0:11:29.87:226,30,0	1/1:8,1:9:8.99:151,9,0	1/1:23,1:24:46.96:398,47,0	1/1:2,0:2:2.98:22,3,0	0/0:8,0:8:21:0,21,322	1/1:8,0:8:5.67:119,6,0	1/1:6,0:6:12.42:91,12,0	1/1:16,0:16:32.86:248,33,0	1/1:22,0:22:63.22:477,63,0	1/1:23,0:23:28.40:280,28,0	1/1:13,0:13:8.97:68,9,0
chr10	22029729	.	C	CT	824.80	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-4.461;DP=679;FS=3.580;HRun=8;HaplotypeScore=70.5851;InbreedingCoeff=0.9980;MQ=80.86;MQ0=0;MQRankSum=-0.241;QD=22.91;ReadPosRankSum=-0.073;VQSLOD=4.0719;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,30:36:81.20:920,81,0	0/0:14,0:14:39.01:0,39,357	0/0:23,0:23:31.50:0,32,312	0/0:19,0:19:28.60:0,29,259	0/0:35,0:35:93.03:0,93,851	0/0:26,0:26:75.04:0,75,686	0/0:22,0:21:57.02:0,57,522	0/0:30,0:30:65.53:0,66,603	0/0:19,0:19:51.01:0,51,461	0/0:23,0:23:63.03:0,63,576	0/0:29,0:29:78.04:0,78,714	0/0:24,0:24:63.02:0,63,577	0/0:27,0:27:72.04:0,72,659	0/0:20,0:20:51.01:0,51,462	0/0:29,0:29:63.02:0,63,576	0/0:24,0:24:69.01:0,69,622	0/0:24,0:24:50.98:0,51,460	0/0:16,0:16:33:0,33,302	0/0:26,0:26:75.01:0,75,677	0/0:23,0:23:57.01:0,57,517	0/0:17,0:17:45.02:0,45,412	0/0:33,0:33:92.99:0,93,838	0/0:30,0:30:81.04:0,81,741	0/0:28,0:28:78.02:0,78,709	0/0:19,0:19:39.02:0,39,357	0/0:25,0:24:65.86:0,66,604	0/0:28,0:28:66.01:0,66,598	0/0:10,0:10:30.02:0,30,275
chr10	22031362	.	CCACTA	C	1238.38	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=5.780;DP=268;FS=43.640;HRun=0;HaplotypeScore=57.8473;InbreedingCoeff=0.8730;MQ=86.62;MQ0=2;MQRankSum=-5.941;QD=22.93;ReadPosRankSum=-3.996;VQSLOD=0.5603;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:36.12:0,36,1106	0/0:3,0:3:9.03:0,9,271	0/0:20,0:17:48.14:0,48,1184	0/0:26,0:17:36.21:0,36,1026	0/0:12,0:12:36.12:0,36,1068	1/1:1,9:10:17.89:210,18,0	1/1:0,3:2:5.93:82,6,0	0/0:32,0:32:87.30:0,87,2689	0/0:5,0:5:12.04:0,12,344	1/1:1,6:7:21.07:418,21,0	1/1:0,5:5:8.86:57,9,0	1/1:0,4:4:8.94:105,9,0	1/1:0,6:6:14.62:190,15,0	1/1:1,7:8:11.91:124,12,0	0/0:6,0:6:18.06:0,18,559	0/0:10,0:9:24.08:0,24,718	0/0:10,0:10:29.97:0,30,779	0/0:7,0:7:15.05:0,15,473	0/0:24,0:24:66.23:0,66,2022	0/0:8,0:8:24.08:0,24,761	0/0:9,0:9:24.08:0,24,735	0/0:4,0:4:12.04:0,12,335	1/1:1,3:4:2.94:18,3,0	1/1:4,0:3:9.03:195,9,0	1/1:0,3:3:5.93:40,6,0	0/0:5,0:5:12.04:0,12,381	0/0:16,0:16:45.14:0,45,1304	0/0:4,0:4:12.04:0,12,380
chr10	22031422	.	CTT	C	427.63	PASS	AB=1.000;AC=24;AF=0.500;AN=48;BaseQRankSum=-0.094;DP=216;FS=4.047;HRun=3;HaplotypeScore=47.0254;InbreedingCoeff=0.0990;MQ=36.11;MQ0=38;MQRankSum=1.499;QD=3.45;ReadPosRankSum=4.333;VQSLOD=-0.7063;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:12,0:12:6.95:64,7,0	0/0:3,0:3:0.47:0,0,1	./.	./.	1/1:8,0:6:4.43:46,4,0	1/1:9,0:9:0.51:3,1,0	0/0:7,0:3:0:0,0,0	0/1:14,0:9:38.82:39,0,46	1/1:5,0:2:2.94:18,3,0	0/1:7,0:5:20.38:28,0,20	0/0:5,0:4:0.47:0,0,1	0/0:6,0:5:0.94:0,1,3	0/1:5,0:5:8.09:12,0,8	1/1:7,0:5:0.71:14,1,0	./.	0/0:5,0:4:5.81:0,6,20	1/1:6,0:5:8.87:57,9,0	1/1:8,0:5:6.78:39,7,0	0/1:5,0:4:4.10:36,0,4	0/0:6,0:5:0.94:0,1,2	1/1:5,0:4:2.97:20,3,0	0/0:2,6:7:0.47:0,0,1	0/0:9,0:7:1.89:0,2,5	./.	0/0:7,0:3:0.47:0,0,1	0/1:13,0:9:0.67:145,0,1	0/1:10,0:9:14.60:15,0,15	1/1:10,0:5:1.55:4,2,0
chr10	22031460	.	T	TTATA	2121.47	PASS	AB=0.619;AC=18;AF=0.500;AN=36;BaseQRankSum=-2.188;DP=187;FS=1.030;HRun=0;HaplotypeScore=66.8556;InbreedingCoeff=0.6223;MQ=68.18;MQ0=4;MQRankSum=-2.002;QD=31.20;ReadPosRankSum=1.315;VQSLOD=3.2371;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:11.82:0,12,108	./.	0/0:17,0:5:11.35:0,11,113	0/0:30,0:12:8.23:0,8,91	0/0:5,0:5:0.89:0,1,2	./.	./.	1/1:7,20:27:65.21:1050,65,0	1/1:2,1:3:3.01:75,3,0	1/1:2,0:2:2.96:19,3,0	./.	0/1:1,0:4:0:0,0,0	./.	./.	0/0:10,0:10:7.75:0,8,35	./.	1/1:1,4:5:12.04:279,12,0	1/1:3,1:4:5.99:97,6,0	1/1:4,7:12:27.05:611,27,0	1/1:1,3:4:3.01:75,3,0	0/1:1,1:2:0:0,0,0	./.	./.	./.	1/1:4,0:3:3.01:48,3,0	0/0:11,0:11:33.03:0,33,353	0/0:7,0:7:12.04:0,12,148	0/0:3,0:3:3.01:0,3,38
chr10	22031462	.	C	CTA	1452.33	PASS	AB=1.000;AC=33;AF=0.750;AN=44;BaseQRankSum=1.497;DP=228;FS=0.000;HRun=0;HaplotypeScore=92.0117;InbreedingCoeff=0.5681;MQ=67.12;MQ0=4;MQRankSum=-2.418;QD=10.52;ReadPosRankSum=-0.775;VQSLOD=3.2629;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,4:8:6.02:99,6,0	./.	0/0:19,0:5:9.46:0,9,54	0/0:38,0:14:2.71:0,3,35	1/1:3,0:4:2.49:5,2,0	1/1:6,0:6:2.94:18,3,0	./.	1/1:38,0:38:67.89:557,68,0	1/1:4,0:4:5.74:38,6,0	1/1:4,0:4:5.85:48,6,0	./.	1/1:5,0:5:2.37:8,2,0	1/1:7,0:7:5.67:29,6,0	1/1:3,0:2:2.74:12,3,0	1/1:7,3:10:12:164,12,0	1/1:5,0:4:11.53:65,12,0	1/1:6,0:6:12.39:97,12,0	1/1:5,0:5:3:27,3,0	1/1:17,0:17:35.93:312,36,0	1/1:6,0:6:8.88:62,9,0	0/1:3,0:3:0:0,0,0	./.	./.	./.	1/1:7,0:5:8.49:49,8,0	0/0:11,0:11:32.76:0,33,246	0/0:7,0:7:11.95:0,12,95	0/0:3,0:3:3:0,3,27
chr10	22031493	.	C	CTATGTATGTA	7826.15	PASS	AB=0.947;AC=25;AF=0.595;AN=42;BaseQRankSum=-3.966;DP=276;FS=21.122;HRun=0;HaplotypeScore=114.4726;InbreedingCoeff=0.5580;MQ=76.63;MQ0=4;MQRankSum=-6.918;QD=51.15;ReadPosRankSum=3.741;VQSLOD=3.0222;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:15.03:0,15,264	./.	0/1:17,0:8:31.55:32,0,96	0/0:36,0:20:6.37:0,6,91	0/0:12,0:12:27.04:0,27,466	./.	1/1:2,0:2:3.01:139,3,0	1/1:44,0:44:99:2890,111,0	1/1:2,2:6:3.01:135,3,0	1/1:5,0:5:9.03:413,9,0	./.	0/0:5,0:5:0.73:0,1,2	./.	./.	0/0:10,0:10:24.05:0,24,425	0/0:8,0:8:0:0,0,0	1/1:9,0:9:8.59:223,9,0	1/1:3,1:7:3.01:136,3,0	1/1:15,0:15:45.15:1907,45,0	1/1:13,0:13:6.02:197,6,0	0/0:3,0:3:0:0,0,0	0/0:6,0:6:18.02:0,18,257	./.	./.	1/1:6,0:6:3.01:138,3,0	1/1:11,0:11:23.98:911,24,0	1/1:10,0:9:15.05:573,15,0	1/1:7,0:7:3.01:133,3,0
chr10	22031494	.	T	TATGTATGTAC	9772.19	PASS	AB=1.000;AC=25;AF=0.595;AN=42;BaseQRankSum=-5.057;DP=322;FS=18.224;HRun=0;HaplotypeScore=112.3241;InbreedingCoeff=0.5395;MQ=74.36;MQ0=4;MQRankSum=-5.793;QD=54.90;ReadPosRankSum=2.592;VQSLOD=3.3076;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:15.05:0,15,303	./.	0/1:18,0:8:31.31:31,0,111	0/0:36,0:20:1.40:0,1,100	0/0:12,0:12:27.09:0,27,550	./.	1/1:0,2:7:3.01:156,3,0	1/1:43,0:43:99:3644,117,0	1/1:4,2:6:3.01:153,3,0	1/1:0,5:9:15.05:566,15,0	./.	0/0:1,4:7:0.73:0,1,2	./.	./.	0/0:10,0:10:24.08:0,24,475	0/0:0,8:9:0:0,0,0	1/1:3,6:9:8.59:258,9,0	1/1:6,1:7:3.01:156,3,0	1/1:3,12:16:48.16:2317,48,0	1/1:0,13:19:6.02:231,6,0	0/0:3,0:3:0:0,0,0	0/0:6,0:6:18.06:0,18,354	./.	./.	1/1:0,6:9:3.01:156,3,0	1/1:2,9:15:36.02:1288,36,0	1/1:2,7:12:15.05:663,15,0	1/1:0,6:7:3.01:153,3,0
chr10	22031497	.	GTA	G	1371.24	PASS	AB=0.982;AC=11;AF=0.212;AN=52;BaseQRankSum=-4.618;DP=333;FS=1.423;HRun=0;HaplotypeScore=115.2397;InbreedingCoeff=0.4526;MQ=74.07;MQ0=4;MQRankSum=0.379;QD=12.94;ReadPosRankSum=1.799;VQSLOD=3.4986;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,10:10:15.05:215,15,0	./.	0/0:18,0:8:8.32:0,8,106	0/0:35,0:20:14.31:0,14,110	1/1:0,12:12:27.09:387,27,0	0/0:8,0:8:8.49:0,8,49	0/0:7,0:7:5.74:0,6,38	0/1:40,0:40:99:255,0,634	0/0:6,0:6:4.30:0,4,16	0/0:11,0:11:23.78:0,24,305	0/0:10,0:10:11.24:0,11,90	0/0:9,0:9:5.91:0,6,74	0/0:14,0:14:8.23:0,8,36	0/0:17,0:16:8.23:0,8,36	1/1:1,10:11:24.08:343,24,0	0/0:9,0:9:10.87:0,11,47	0/1:9,0:9:19.40:19,0,38	0/0:8,0:8:9:0,9,104	0/1:17,1:18:54.87:55,0,343	0/0:19,0:19:14.24:0,14,115	0/0:3,0:3:3.01:0,3,47	1/1:0,6:6:18.06:258,18,0	0/0:2,0:2:3.01:0,3,49	./.	0/0:11,0:11:17.24:0,17,134	0/0:15,0:15:32.62:0,33,378	0/0:13,0:12:11.99:0,12,115	0/0:7,0:7:8.49:0,8,51
chr10	22031500	.	T	TGTAC	3697.27	PASS	AB=0.943;AC=24;AF=0.462;AN=52;BaseQRankSum=7.040;DP=326;FS=11.288;HRun=0;HaplotypeScore=106.0686;InbreedingCoeff=0.0790;MQ=75.42;MQ0=4;MQRankSum=-9.681;QD=17.28;ReadPosRankSum=2.627;VQSLOD=2.8758;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:17.99:0,18,156	./.	0/0:17,0:8:5.66:0,6,134	0/0:35,0:18:12.05:0,12,127	0/0:13,0:13:26.99:0,27,236	0/1:8,1:9:23.86:24,0,38	1/1:7,0:7:5.95:71,6,0	0/1:20,12:32:99:1285,0,244	1/1:7,0:7:5.95:101,6,0	0/1:11,0:11:99:142,0,101	0/1:11,0:11:33.15:39,0,33	0/0:8,1:9:5.96:0,6,49	1/1:11,0:12:8.83:54,9,0	1/1:16,0:15:8.83:54,9,0	0/0:11,0:11:23.98:0,24,205	1/1:9,0:9:11.77:72,12,0	1/1:6,1:7:11.90:172,12,0	0/1:8,1:9:36.97:44,0,37	0/1:16,2:18:47.86:887,0,48	0/1:19,0:19:22.77:92,0,23	0/0:3,0:3:2.97:0,3,24	0/0:6,0:6:18:0,18,157	0/0:2,0:2:3:0,3,25	./.	0/1:11,0:11:32.14:89,0,32	0/1:16,0:16:99:301,0,201	0/1:13,0:12:8.92:186,0,9	1/1:7,0:7:8.89:86,9,0
chr10	22033449	.	TTGTGTGTG	T	1402.77	PASS	AB=0.918;AC=15;AF=0.300;AN=50;BaseQRankSum=5.933;DP=626;FS=10.233;HRun=0;HaplotypeScore=156.1581;InbreedingCoeff=0.5665;MQ=62.25;MQ0=13;MQRankSum=-6.314;QD=7.23;ReadPosRankSum=1.232;VQSLOD=2.2087;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:38:14.15:23,0,14	1/1:5,2:7:6.02:149,6,0	./.	./.	0/0:21,0:21:6.02:0,6,197	0/0:19,0:19:27.08:0,27,794	0/0:21,0:25:36.12:0,36,1311	0/0:19,0:19:1.25:0,1,3	1/1:8,0:23:18.06:335,18,0	0/0:16,0:16:9.92:0,10,297	0/0:12,0:13:15.05:0,15,520	0/0:26,0:27:24.08:0,24,790	0/0:23,0:23:27.05:0,27,735	0/0:30,0:30:24.08:0,24,779	0/0:21,0:21:12.04:0,12,447	1/1:18,2:21:9.64:273,10,0	1/1:24,6:30:1.45:358,1,0	1/1:18,2:20:4:145,4,0	0/1:25,1:26:9.18:68,0,9	1/1:15,6:21:14.92:209,15,0	./.	0/0:23,0:22:5.25:0,5,48	0/0:14,0:13:12.04:0,12,415	0/0:35,0:35:58.54:0,59,2076	0/0:13,0:13:15.02:0,15,378	0/0:16,0:16:18.06:0,18,623	0/0:18,0:18:27.09:0,27,971	0/1:8,0:7:2.38:2,0,209
chr10	22033688	.	GA	G	1238.26	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=4.710;DP=564;FS=3.196;HRun=9;HaplotypeScore=102.0378;InbreedingCoeff=0.9823;MQ=75.53;MQ0=1;MQRankSum=-1.940;QD=21.35;ReadPosRankSum=0.269;VQSLOD=3.6859;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:41:99:0,111,1188	0/0:11,0:11:30.09:0,30,346	0/0:25,0:25:57.57:0,58,656	0/0:18,0:17:35.64:0,36,320	0/0:19,0:19:57.17:0,57,658	0/0:17,0:17:48.13:0,48,544	0/0:11,0:11:30.09:0,30,346	0/0:28,0:28:63.18:0,63,718	0/0:24,0:25:66.03:0,66,742	0/0:21,0:21:50.98:0,51,569	0/0:20,0:20:57.15:0,57,640	0/0:16,0:17:47.97:0,48,534	0/0:20,0:20:54.15:0,54,614	0/0:18,0:18:54.15:0,54,614	0/0:18,0:18:54.16:0,54,623	0/0:22,1:23:41.69:0,42,719	0/0:36,0:36:96.29:0,96,1108	0/0:11,0:11:24.07:0,24,277	0/0:20,1:21:35.71:0,36,660	0/0:18,0:18:51.13:0,51,570	0/0:15,0:15:42.11:0,42,473	0/0:15,0:15:42.12:0,42,485	0/0:21,1:22:35.74:0,36,657	0/0:18,0:18:54.16:0,54,621	0/0:17,1:18:12.11:0,12,380	1/1:1,23:25:62.06:555,62,0	1/1:2,25:27:75.04:686,75,0	1/1:1,5:6:15:137,15,0
chr10	22034621	.	A	ATC	2878.41	PASS	AB=0.851;AC=40;AF=0.741;AN=54;BaseQRankSum=-1.272;DP=601;FS=8.973;HRun=0;HaplotypeScore=162.4190;InbreedingCoeff=0.2154;MQ=66.51;MQ0=11;MQRankSum=0.728;QD=6.19;ReadPosRankSum=-1.081;VQSLOD=2.7293;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:15:7.44:41,7,0	1/1:6,2:8:9.03:137,9,0	0/0:34,0:23:2.86:0,3,20	0/0:43,0:21:1.72:0,2,4	1/1:23,0:23:11.74:88,12,0	1/1:36,0:35:4.90:19,5,0	1/1:28,0:27:14.83:112,15,0	0/1:30,3:33:10.64:206,0,11	0/1:13,4:17:17.84:168,0,18	1/1:13,0:13:14.62:57,15,0	1/1:26,0:26:2.92:17,3,0	1/1:17,0:17:14.28:86,14,0	1/1:19,0:17:13.57:71,14,0	1/1:17,0:17:4.97:31,5,0	0/0:6,0:24:43.06:0,43,202	0/1:21,7:28:34.21:358,0,34	0/1:10,11:21:32.81:393,0,33	1/1:11,3:13:2.80:146,3,0	1/1:8,1:9:9.01:98,9,0	1/1:22,5:27:30.07:405,30,0	0/1:10,1:12:8.12:40,0,8	1/1:15,0:15:5.99:49,6,0	0/1:23,0:22:0:0,0,0	0/0:14,0:14:1.55:0,2,4	./.	1/1:20,0:23:35.77:289,36,0	1/1:16,0:19:17.83:144,18,0	1/1:17,0:16:9.40:67,9,0
chr10	22034656	.	CTAT	C	567.51	PASS	AB=0.962;AC=17;AF=0.315;AN=54;BaseQRankSum=7.169;DP=592;FS=12.213;HRun=0;HaplotypeScore=173.3590;InbreedingCoeff=-0.0656;MQ=49.82;MQ0=30;MQRankSum=-3.257;QD=2.35;ReadPosRankSum=-0.293;VQSLOD=2.0725;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:16,0:14:11.24:35,0,11	0/1:10,0:11:4.47:4,0,94	0/0:67,0:17:41.62:0,42,589	0/0:86,0:17:25.06:0,25,342	0/1:22,0:22:19.91:20,0,627	1/1:19,2:20:5.53:72,6,0	0/1:14,0:13:43.85:44,0,92	0/0:27,0:28:63.21:0,63,1332	0/0:15,0:16:3.70:0,4,180	0/1:23,0:23:52.48:223,0,52	0/0:10,1:11:2.85:0,3,65	0/1:13,4:17:47.19:71,0,47	0/1:15,2:16:28.60:100,0,29	1/1:18,0:18:8.30:85,8,0	0/0:29,0:29:77.51:0,78,1060	0/1:19,0:20:5.23:5,0,384	0/0:16,0:16:31.10:0,31,450	0/1:9,0:8:1.68:2,0,299	0/0:19,0:18:41.71:0,42,753	0/0:20,0:21:23.84:0,24,334	0/0:7,0:7:15.04:0,15,319	0/1:14,0:14:45.17:45,0,250	0/0:21,0:20:5.81:0,6,130	0/1:12,1:13:0:0,0,0	./.	0/1:20,0:19:0.03:0,0,660	0/0:21,0:20:2.56:0,3,470	0/1:6,0:6:2.17:2,0,131
chr10	22034658	.	AT	A	497.25	PASS	AB=0.948;AC=16;AF=0.296;AN=54;BaseQRankSum=5.165;DP=592;FS=3.214;HRun=2;HaplotypeScore=165.3716;InbreedingCoeff=0.0635;MQ=50.48;MQ0=27;MQRankSum=-4.780;QD=2.40;ReadPosRankSum=-0.854;VQSLOD=-0.4821;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:16,1:15:7.31:28,7,0	0/0:11,0:11:9.95:0,10,101	0/0:66,0:17:41.18:0,41,477	0/0:85,0:16:28.68:0,29,280	0/0:22,0:22:19.22:0,19,285	1/1:21,0:20:5.99:61,6,0	0/1:12,0:11:17.85:18,0,56	0/0:30,0:30:60.20:0,60,892	0/0:16,0:16:15.80:0,16,138	0/1:26,0:26:31.55:160,0,32	0/0:12,0:12:2.85:0,3,44	0/1:17,0:17:18.62:19,0,70	0/1:16,0:15:34.22:34,0,41	1/1:18,0:18:5.22:35,5,0	0/0:30,0:30:79.73:0,80,759	0/0:20,0:20:19.67:0,20,286	0/0:15,0:15:27.01:0,27,357	0/1:9,0:8:16.91:17,0,232	0/0:20,0:19:41.30:0,41,533	0/0:21,0:21:21:0,21,242	0/0:7,0:7:15.03:0,15,220	0/1:13,0:13:66.55:67,0,89	0/0:21,0:20:5.89:0,6,89	0/1:12,0:12:0:0,0,0	./.	0/1:13,6:19:99:145,0,416	0/1:13,8:20:56.47:56,0,239	0/1:6,0:6:13.38:13,0,79
chr10	22034659	.	TTCTATCTATCTATCTATCTA	T	5306.75	PASS	AB=0.771;AC=33;AF=0.611;AN=54;BaseQRankSum=3.881;DP=592;FS=17.374;HRun=0;HaplotypeScore=257.8777;InbreedingCoeff=0.6697;MQ=50.37;MQ0=26;MQRankSum=-1.160;QD=17.46;ReadPosRankSum=-0.985;VQSLOD=1.8374;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:15:6.49:0,6,205	1/1:3,8:11:14.99:505,15,0	./.	0/0:84,0:16:2.03:0,2,4	0/0:6,0:22:39.10:0,39,2798	0/1:5,11:20:11.54:49,0,12	1/1:13,0:15:11.78:108,12,0	1/1:14,14:28:39.10:513,39,0	1/1:8,8:16:6.22:303,6,0	1/1:5,17:26:17.24:1430,17,0	1/1:6,4:12:8.84:59,9,0	1/1:5,8:17:17.86:209,18,0	1/1:5,7:15:15.05:650,15,0	1/1:7,10:18:8.86:214,9,0	0/0:30,0:30:36.56:0,37,2735	1/1:10,10:20:20.93:563,21,0	0/1:13,0:14:34.84:40,0,35	1/1:9,0:9:8.29:90,8,0	1/1:12,7:19:21.02:380,21,0	1/1:8,12:20:11.92:105,12,0	1/1:7,0:7:3.01:48,3,0	0/0:5,0:14:23.11:0,23,1431	0/1:6,11:20:0:0,0,0	1/1:6,5:12:5.93:40,6,0	0/0:2,0:9:15.05:0,15,193	0/0:17,0:17:21.07:0,21,1100	0/0:22,0:21:30.10:0,30,1660	0/0:5,0:6:9.03:0,9,453
chr10	22034670	.	T	TC	440.79	PASS	AB=0.964;AC=12;AF=0.231;AN=52;BaseQRankSum=7.560;DP=519;FS=8.404;HRun=1;HaplotypeScore=145.9028;InbreedingCoeff=-0.0086;MQ=47.03;MQ0=23;MQRankSum=-5.328;QD=2.86;ReadPosRankSum=0.529;VQSLOD=-0.6301;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:16,0:16:4.37:4,0,154	0/1:11,0:11:26.48:26,0,38	0/0:44,1:10:20.86:0,21,246	0/0:68,0:12:10.79:0,11,108	0/0:25,0:25:41.04:0,41,420	1/1:16,1:17:2.77:23,3,0	0/1:14,0:14:36.16:47,0,36	0/0:24,0:24:51.16:0,51,675	0/1:16,0:16:29.58:30,0,81	0/1:22,2:24:23.34:278,0,23	0/0:10,1:11:3.01:0,3,42	0/1:12,2:14:15.33:15,0,44	0/1:10,1:11:18.52:70,0,19	1/1:16,0:16:4.40:43,4,0	0/0:30,0:30:45.15:0,45,629	0/0:20,0:20:7.05:0,7,196	0/0:9,0:9:15.05:0,15,200	0/0:11,0:11:31.01:0,31,340	0/0:14,0:13:23.55:0,24,283	0/0:19,0:19:15.05:0,15,209	0/0:6,0:6:12.04:0,12,167	0/1:15,0:15:44.89:45,0,265	0/0:14,0:14:2.98:0,3,42	./.	./.	0/0:15,0:15:42.06:0,42,542	0/0:26,0:25:46.97:0,47,623	0/0:6,0:6:8.91:0,9,103
chr10	22034673	.	CT	C	360.91	PASS	AB=0.973;AC=10;AF=0.185;AN=54;BaseQRankSum=8.865;DP=501;FS=0.000;HRun=1;HaplotypeScore=142.7018;InbreedingCoeff=0.0537;MQ=46.47;MQ0=23;MQRankSum=-5.553;QD=2.96;ReadPosRankSum=1.191;VQSLOD=-0.2074;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:1.86:0,2,172	0/1:10,0:10:36.17:40,0,36	0/0:39,0:8:18.04:0,18,256	0/0:59,1:10:10:0,10,75	0/0:25,0:25:53.69:0,54,606	1/1:16,0:17:2.44:11,2,0	0/1:12,2:14:8.88:9,0,40	0/0:22,0:22:45.15:0,45,661	0/1:16,0:16:24.08:24,0,80	0/1:23,1:24:13.70:291,0,14	0/0:11,0:11:3.01:0,3,46	0/1:14,0:14:8.68:9,0,55	0/1:11,0:11:11.07:71,0,11	1/1:15,0:16:3.19:33,3,0	0/0:29,0:29:48.16:0,48,757	0/0:20,0:20:0.32:0,0,208	0/0:9,1:10:0.46:0,0,157	0/0:11,0:11:13.89:0,14,353	0/0:14,0:13:18.70:0,19,295	0/0:19,0:19:15.51:0,16,209	0/0:6,0:6:12.02:0,12,161	0/0:16,0:16:9.45:0,9,342	0/0:14,0:14:2.88:0,3,46	./.	0/0:9,0:9:0:0,0,0	0/0:14,0:14:42.13:0,42,624	0/0:26,0:25:48.15:0,48,710	0/0:6,0:6:9.03:0,9,124
chr10	22034674	.	T	TC	551.93	PASS	AB=0.985;AC=12;AF=0.222;AN=54;BaseQRankSum=6.470;DP=497;FS=0.734;HRun=1;HaplotypeScore=142.9834;InbreedingCoeff=-0.0158;MQ=45.27;MQ0=23;MQRankSum=-4.877;QD=3.70;ReadPosRankSum=-0.988;VQSLOD=-0.2865;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:9.25:0,9,168	0/1:10,0:10:30.36:30,0,31	0/0:40,0:7:17.73:0,18,213	0/0:56,0:10:5.18:0,5,82	0/0:25,0:25:52.53:0,53,525	1/1:16,0:17:2.78:30,3,0	0/1:13,2:15:31.60:87,0,32	0/0:22,0:22:45.11:0,45,566	0/1:16,0:16:52.79:53,0,75	0/1:24,0:24:26.54:316,0,27	0/0:10,1:11:3.01:0,3,42	0/0:13,0:14:0.16:0,0,52	0/1:11,0:11:27.17:94,0,27	1/1:16,0:16:3.70:32,4,0	0/0:29,0:29:48.16:0,48,669	0/1:20,0:20:25.79:26,0,190	0/1:10,0:10:19.30:19,0,116	0/1:10,0:10:2.49:2,0,307	0/0:14,0:13:21.94:0,22,278	0/0:19,0:19:12.51:0,13,168	0/0:6,0:6:9.03:0,9,124	0/0:16,0:16:12.48:0,12,300	0/0:14,0:14:2.98:0,3,42	./.	0/0:9,0:9:0:0,0,0	0/0:14,0:14:42.05:0,42,537	0/0:27,0:26:48.05:0,48,623	0/0:6,0:6:8.99:0,9,103
chr10	22034676	.	TCTA	T	1818.45	PASS	AB=0.945;AC=19;AF=0.339;AN=56;BaseQRankSum=7.996;DP=491;FS=12.707;HRun=0;HaplotypeScore=141.4415;InbreedingCoeff=0.0930;MQ=45.73;MQ0=24;MQRankSum=-3.097;QD=7.84;ReadPosRankSum=-5.535;VQSLOD=-0.5946;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:15,0:15:5.53:6,0,154	0/1:10,0:10:22.14:102,0,22	0/0:36,0:6:15.03:0,15,168	0/0:53,0:12:13.35:0,13,102	0/0:26,0:26:55.51:0,56,946	1/1:15,2:17:11.81:81,12,0	0/1:15,0:15:21.33:75,0,21	0/1:22,0:22:99:187,0,460	0/1:16,0:16:60.65:89,0,61	1/1:22,2:24:20.12:672,20,0	0/1:7,3:10:13.87:48,0,14	0/1:10,4:14:22.62:100,0,23	0/1:9,2:11:2.11:93,0,2	1/1:15,1:16:11.63:113,12,0	0/0:28,0:28:48.16:0,48,1037	0/1:20,0:20:99:106,0,148	0/0:10,0:10:8.86:0,9,149	0/0:11,0:11:26.71:0,27,337	0/1:15,0:13:99:201,0,184	0/1:18,0:18:80.90:81,0,131	0/0:6,0:6:5.85:0,6,78	0/0:15,0:15:11.24:0,11,495	0/0:14,0:14:2.80:0,3,39	1/1:8,1:9:5.93:40,6,0	0/0:11,0:11:21.07:0,21,271	0/0:14,0:14:39.13:0,39,757	0/0:27,0:26:51.09:0,51,946	0/0:5,0:5:9.03:0,9,168
chr10	22034683	.	A	AT	114.41	PASS	AB=0.761;AC=2;AF=0.036;AN=56;BaseQRankSum=1.546;DP=460;FS=0.000;HRun=1;HaplotypeScore=132.7036;InbreedingCoeff=-0.0675;MQ=47.54;MQ0=19;MQRankSum=-3.159;QD=5.45;ReadPosRankSum=-0.014;VQSLOD=0.1615;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:13.96:0,14,163	0/0:11,0:11:17:0,17,155	0/0:27,1:7:10.82:0,11,98	0/0:32,0:11:3.02:0,3,131	0/0:25,0:25:40.97:0,41,356	0/0:18,0:18:5.33:0,5,180	0/0:16,1:17:26.95:0,27,348	0/0:22,0:22:54.12:0,54,628	0/0:15,0:15:18:0,18,189	0/0:24,0:24:12.12:0,12,438	0/0:10,0:10:12.04:0,12,153	0/0:15,0:15:27.08:0,27,342	0/0:10,0:10:13.85:0,14,108	0/0:16,0:16:22.77:0,23,229	0/0:27,0:27:48.12:0,48,604	0/0:18,1:19:13.62:0,14,311	0/1:6,2:8:51.30:51,0,68	0/1:8,5:13:99:151,0,165	0/0:16,0:14:32.52:0,33,326	0/0:18,0:18:24.06:0,24,285	0/0:4,0:4:5.85:0,6,77	0/0:14,0:14:24.74:0,25,211	0/0:15,0:15:12.01:0,12,155	0/0:9,0:9:6.02:0,6,76	0/0:13,0:13:27.09:0,27,350	0/0:15,0:15:39.22:0,39,458	0/0:26,0:25:51.18:0,51,627	0/0:5,0:5:7.57:0,8,82
chr10	22034925	.	CT	C	20026.99	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-0.370;DP=661;FS=26.134;HRun=5;HaplotypeScore=71.3469;InbreedingCoeff=0.9969;MQ=67.10;MQ0=0;MQRankSum=-7.355;QD=32.46;ReadPosRankSum=7.093;VQSLOD=2.7437;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,21:21:51.16:623,51,0	1/1:0,11:11:27.08:335,27,0	0/0:22,0:21:62.40:0,62,756	0/0:22,0:21:21.03:0,21,698	1/1:1,29:30:78.11:942,78,0	1/1:0,30:30:87.27:1079,87,0	1/1:3,17:20:48.15:595,48,0	1/1:1,26:27:75.22:916,75,0	1/1:0,11:11:30.09:372,30,0	1/1:1,35:36:99:1250,102,0	1/1:0,22:22:63.20:777,63,0	1/1:0,25:25:66.21:818,66,0	1/1:2,21:23:51.16:632,51,0	1/1:1,15:16:36.11:446,36,0	1/1:2,22:24:60.19:744,60,0	1/1:0,27:27:72.23:893,72,0	1/1:1,27:28:78.18:948,78,0	1/1:1,17:18:39.12:482,39,0	1/1:0,16:16:48.15:594,48,0	1/1:1,35:36:99:1298,105,0	1/1:1,18:19:48.15:595,48,0	1/1:1,17:18:42.13:521,42,0	1/1:1,20:21:48.15:595,48,0	1/1:1,31:32:75.24:930,75,0	1/1:1,29:30:84.26:1041,84,0	1/1:0,30:30:90.28:1115,90,0	1/1:1,32:33:84.26:1040,84,0	1/1:0,13:13:36.11:446,36,0
chr10	22034943	.	ATTTG	A	308.99	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=1.520;DP=693;FS=4.191;HRun=0;HaplotypeScore=176.1644;InbreedingCoeff=0.9938;MQ=63.57;MQ0=1;MQRankSum=-3.994;QD=15.45;ReadPosRankSum=-1.304;VQSLOD=3.3288;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:13,7:20:29.12:403,29,0	0/0:9,0:9:24.08:0,24,525	0/0:31,0:27:44.38:0,44,785	0/0:25,1:24:37.96:0,38,758	0/0:28,0:28:75.10:0,75,1625	0/0:35,0:35:84.27:0,84,1928	0/0:18,0:18:39.12:0,39,881	0/0:25,0:25:48.14:0,48,1026	0/0:12,0:12:24.08:0,24,510	0/0:33,0:33:63.22:0,63,1541	0/0:19,0:19:54.06:0,54,1159	0/0:22,0:22:54.19:0,54,1315	0/0:22,0:22:48.12:0,48,1005	0/0:15,0:15:27.09:0,27,638	0/0:24,0:24:60.17:0,60,1322	0/0:28,0:28:60.20:0,60,1443	0/0:31,0:31:75.23:0,75,1694	0/0:21,0:21:45.09:0,45,998	0/0:23,0:23:36.11:0,36,759	0/0:45,0:45:99:0,120,2759	0/0:18,0:18:45.15:0,45,1023	0/0:20,0:20:60.08:0,60,1263	0/0:21,0:21:36.11:0,36,759	0/0:35,0:35:57.15:0,57,1271	0/0:30,0:30:69.20:0,69,1525	0/0:29,0:29:63.20:0,63,1399	0/0:38,0:38:93.30:0,93,2096	0/0:15,0:15:41.97:0,42,759
chr10	22035153	.	CTGTGGCTTAAACCACATGA	C	3192.05	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.953;DP=715;FS=2.770;HRun=0;HaplotypeScore=341.7679;InbreedingCoeff=0.9977;MQ=80.39;MQ0=0;MQRankSum=-8.103;QD=88.67;ReadPosRankSum=0.825;VQSLOD=2.8806;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,36:36:69.17:3287,69,0	0/0:15,0:15:45.15:0,45,3913	0/0:16,0:16:46.97:0,47,2295	0/0:21,0:21:57.08:0,57,2442	0/0:31,0:31:93.31:0,93,7375	0/0:22,0:22:63.22:0,63,5072	0/0:25,0:25:72.23:0,72,5821	0/0:37,0:37:99:0,99,7821	0/0:22,0:22:66.21:0,66,5450	0/0:41,0:41:99:0,117,9196	0/0:15,0:15:45.14:0,45,2915	0/0:26,0:26:75.23:0,75,5732	0/0:29,0:29:87.28:0,87,6295	0/0:35,0:35:99:0,102,7795	0/0:37,0:37:99:0,111,8784	0/0:24,0:24:69.22:0,69,5313	0/0:23,0:23:63.22:0,63,4816	0/0:21,0:21:63.19:0,63,5026	0/0:18,0:18:45.14:0,45,2828	0/0:23,0:23:66.23:0,66,5535	0/0:36,0:36:99:0,108,9094	0/0:30,0:30:87.26:0,87,6109	0/0:11,0:11:33.08:0,33,2380	0/0:32,0:32:96.33:0,96,7329	0/0:19,0:19:54.17:0,54,4165	0/0:33,0:33:96.31:0,96,7272	0/0:29,0:29:87.30:0,87,7339	0/0:8,0:8:24.08:0,24,1805
chr10	22038544	.	GACACACAC	G	1657.82	PASS	AB=0.902;AC=21;AF=0.404;AN=52;BaseQRankSum=3.348;DP=470;FS=6.086;HRun=0;HaplotypeScore=127.7495;InbreedingCoeff=0.5770;MQ=60.02;MQ0=14;MQRankSum=-4.522;QD=8.82;ReadPosRankSum=1.267;VQSLOD=1.6187;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:42.10:0,42,1200	0/0:3,0:7:3.01:0,3,104	0/0:24,0:14:0:0,0,0	./.	0/1:19,1:20:27.63:28,0,42	1/1:11,7:18:3.01:74,3,0	0/1:16,2:19:12.95:126,0,13	0/0:27,0:27:5.77:0,6,92	0/0:8,0:9:15.05:0,15,323	1/1:8,11:19:23.84:433,24,0	1/1:16,4:19:3.01:70,3,0	1/1:3,8:11:6.02:133,6,0	1/1:9,6:16:14.65:349,15,0	1/1:8,1:11:9.01:124,9,0	0/0:20,0:19:18.03:0,18,467	0/0:14,0:14:15.05:0,15,495	0/0:19,0:20:18.53:0,19,609	0/0:13,0:15:15.05:0,15,489	0/0:16,0:16:27.09:0,27,904	0/0:21,0:25:24.07:0,24,686	0/0:13,0:12:18.06:0,18,598	1/1:11,1:17:10.63:111,11,0	1/1:9,7:16:8.97:223,9,0	./.	1/1:8,1:12:12.02:160,12,0	0/0:17,0:17:22.22:0,22,230	0/0:13,0:13:2.14:0,2,149	0/1:7,0:8:3.84:4,0,101
chr10	22039019	.	T	TA	15360.36	PASS	AB=0.913;AC=53;AF=0.946;AN=56;BaseQRankSum=-1.505;DP=682;FS=41.972;HRun=8;HaplotypeScore=82.7393;InbreedingCoeff=0.6469;MQ=81.31;MQ0=0;MQRankSum=-7.063;QD=23.17;ReadPosRankSum=4.066;VQSLOD=2.5653;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,36:41:99:1197,105,0	1/1:0,1:10:28.83:175,29,0	0/1:19,1:21:48.85:49,0,184	0/0:19,0:19:30.30:0,30,255	1/1:5,29:34:87.22:987,87,0	1/1:4,33:37:81.24:935,81,0	1/1:5,15:20:39.12:450,39,0	1/1:7,0:25:53.83:298,54,0	1/1:2,1:21:48.46:265,48,0	1/1:2,24:26:72.20:821,72,0	1/1:1,20:21:54.16:623,54,0	1/1:2,16:18:45.13:519,45,0	1/1:4,22:26:60.18:692,60,0	1/1:4,25:29:69.20:795,69,0	1/1:3,29:32:78.23:900,78,0	1/1:1,0:20:45.45:231,45,0	1/1:2,0:32:88.22:457,88,0	1/1:3,0:16:39.80:202,40,0	1/1:4,1:21:48.05:258,48,0	1/1:1,1:26:71.27:372,71,0	1/1:2,0:24:48.29:245,48,0	1/1:2,19:22:35.51:630,36,0	1/1:1,19:20:54.16:623,54,0	1/1:1,20:21:60.18:692,60,0	1/1:0,29:29:78.23:900,78,0	1/1:4,28:32:81.24:935,81,0	1/1:1,23:24:54.16:623,54,0	1/1:1,14:15:42.12:485,42,0
chr10	22040433	.	TA	T	1689.44	PASS	AB=0.944;AC=7;AF=0.125;AN=56;BaseQRankSum=10.268;DP=546;FS=6.038;HRun=9;HaplotypeScore=55.0407;InbreedingCoeff=0.8306;MQ=74.97;MQ0=1;MQRankSum=1.346;QD=17.24;ReadPosRankSum=0.528;VQSLOD=3.5092;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,17:18:48.03:439,48,0	0/0:10,0:10:24.07:0,24,277	0/1:16,1:16:10.74:11,0,244	0/0:9,0:9:9.33:0,9,126	1/1:3,26:29:71.99:651,72,0	0/0:15,0:15:42.10:0,42,465	0/0:22,0:22:60.13:0,60,677	0/0:31,0:31:69.20:0,69,788	0/0:16,0:16:27.08:0,27,311	0/0:23,0:23:60.17:0,60,684	0/0:24,0:24:66.17:0,66,735	0/0:17,0:17:51.15:0,51,588	0/0:17,0:17:39.12:0,39,450	0/0:13,0:13:39.12:0,39,450	0/0:18,0:18:48.13:0,48,546	0/0:18,0:18:42.11:0,42,475	0/0:10,0:10:30.05:0,30,323	0/0:20,0:20:42.11:0,42,473	0/0:18,0:18:54.14:0,54,607	0/0:25,0:26:78.06:0,78,871	0/0:12,0:12:30.07:0,30,334	1/1:4,30:34:62.44:736,62,0	0/0:23,0:23:69.18:0,69,776	0/0:7,0:7:21.06:0,21,242	0/0:23,0:23:60.17:0,60,685	0/0:33,0:33:96.28:0,96,1107	0/0:28,0:29:72.05:0,72,810	0/0:14,0:14:39.12:0,39,450
chr10	22041557	.	GTCTT	G	20179.64	PASS	AB=0.728;AC=50;AF=0.893;AN=56;BaseQRankSum=-1.593;DP=627;FS=2.077;HRun=0;HaplotypeScore=158.3032;InbreedingCoeff=0.5546;MQ=68.13;MQ0=0;MQRankSum=-1.603;QD=34.61;ReadPosRankSum=7.787;VQSLOD=4.4277;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,17:20:21.07:365,21,0	1/1:10,5:15:9.10:536,9,0	0/0:31,0:24:41.20:0,41,892	0/0:12,0:12:27.08:0,27,559	1/1:8,25:33:51.71:930,52,0	1/1:19,8:27:63.19:995,63,0	1/1:2,16:18:36.12:623,36,0	1/1:12,23:35:69.23:1156,69,0	1/1:10,12:22:46.40:931,46,0	1/1:7,22:29:66.15:1065,66,0	1/1:13,18:31:81.26:1333,81,0	1/1:13,6:19:57.16:884,57,0	1/1:18,8:26:63.21:1071,63,0	1/1:12,10:22:48.61:753,49,0	1/1:2,19:21:45.15:768,45,0	1/1:8,14:22:58.54:996,59,0	1/1:0,11:11:15.05:259,15,0	0/1:12,2:14:76.54:207,0,77	1/1:8,16:24:37.53:772,38,0	1/1:7,23:30:2.58:861,3,0	1/1:2,10:12:12.04:209,12,0	0/1:7,18:25:51.79:777,0,52	1/1:2,15:17:17.16:276,17,0	1/1:12,6:18:45.15:758,45,0	1/1:16,15:31:84.27:1351,84,0	1/1:11,6:17:42.14:724,42,0	1/1:22,12:34:75.20:1181,75,0	1/1:0,10:10:24.08:399,24,0
chr10	22041612	.	TTC	T	217.66	PASS	AB=0.610;AC=1;AF=0.018;AN=56;BaseQRankSum=1.356;DP=635;FS=10.446;HRun=0;HaplotypeScore=190.8607;InbreedingCoeff=-0.0277;MQ=46.93;MQ0=8;MQRankSum=0.070;QD=8.71;ReadPosRankSum=3.289;VQSLOD=2.3480;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:53.85:0,54,515	0/0:11,0:11:27.09:0,27,462	0/0:20,0:7:15.05:0,15,227	0/0:20,0:5:15.05:0,15,233	0/0:27,0:27:78.15:0,78,1104	0/0:29,0:29:33.10:0,33,481	0/0:31,0:31:83.34:0,83,921	0/0:43,0:41:99:0,118,1801	0/0:20,0:20:36.12:0,36,613	0/0:24,0:24:68.25:0,68,829	0/0:27,0:27:71.52:0,72,975	0/0:22,0:22:27.08:0,27,409	0/0:18,0:18:30.09:0,30,465	0/0:21,0:21:62.87:0,63,836	0/1:9,16:25:78.79:292,0,79	0/0:22,0:22:27.09:0,27,456	0/0:21,0:21:42.23:0,42,609	0/0:13,0:13:35.02:0,35,391	0/0:30,0:29:77.94:0,78,1005	0/0:31,0:30:81.12:0,81,1098	0/0:4,0:4:8.95:0,9,84	0/0:24,0:24:72.08:0,72,903	0/0:17,0:17:45.03:0,45,609	0/0:13,0:13:3.01:0,3,39	0/0:38,0:38:66.20:0,66,1026	0/0:20,0:20:56.83:0,57,646	0/0:30,0:30:44.68:0,45,665	0/0:13,0:13:39.04:0,39,466
chr10	22041614	.	C	CCTTCCTTT	18538.80	PASS	AB=0.850;AC=48;AF=0.857;AN=56;BaseQRankSum=-4.689;DP=647;FS=1.287;HRun=0;HaplotypeScore=191.6739;InbreedingCoeff=0.3675;MQ=48.06;MQ0=8;MQRankSum=-1.227;QD=30.44;ReadPosRankSum=0.409;VQSLOD=4.7280;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:22:99:147,0,313	1/1:7,4:13:26.96:608,27,0	0/0:19,0:7:14.97:0,15,134	0/0:19,0:5:15.01:0,15,145	1/1:23,0:28:74.43:830,74,0	1/1:4,23:28:27.06:823,27,0	1/1:26,1:27:71.88:1144,72,0	1/1:44,0:43:98.24:793,98,0	1/1:8,10:22:35.78:810,36,0	1/1:19,4:23:63.08:1482,63,0	1/1:13,16:36:83.31:1493,83,0	1/1:6,17:23:26.98:715,27,0	1/1:7,11:21:29.98:736,30,0	1/1:18,2:20:53.73:1186,54,0	0/1:25,0:24:99:130,0,308	1/1:6,15:22:23.92:535,24,0	1/1:19,0:20:41.66:447,42,0	1/1:12,0:12:28.14:345,28,0	1/1:28,0:28:60.44:649,60,0	1/1:30,1:30:77.88:1365,78,0	1/1:3,0:3:6.01:91,6,0	1/1:18,0:24:65.70:749,66,0	1/1:16,0:17:45.41:743,45,0	1/1:1,12:13:2.83:19,3,0	1/1:14,24:40:60:1705,60,0	1/1:3,0:20:37.01:583,37,0	0/1:5,0:33:61.03:193,0,61	0/1:10,0:12:10.06:220,0,10
chr10	22041742	.	G	GAA	2905.30	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-10.691;DP=631;FS=11.697;HRun=8;HaplotypeScore=72.8887;InbreedingCoeff=0.9971;MQ=70.68;MQ0=1;MQRankSum=1.336;QD=38.23;ReadPosRankSum=-0.410;VQSLOD=2.4709;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,15:18:45.15:714,45,0	0/0:9,0:9:21.04:0,21,234	0/0:13,0:12:27.07:0,27,299	0/0:13,0:13:24.02:0,24,253	1/1:1,33:34:98.78:1496,99,0	0/0:39,0:39:99:0,105,1170	0/0:17,0:17:51.14:0,51,569	0/0:30,0:30:84.18:0,84,917	0/0:21,0:21:57.13:0,57,635	0/0:25,0:25:72.16:0,72,784	0/0:22,0:22:60.13:0,60,659	0/0:21,0:21:57.15:0,57,635	0/0:19,0:19:54.14:0,54,602	0/0:23,0:23:60.12:0,60,659	0/0:32,0:32:84.18:0,84,918	0/0:27,0:27:63.14:0,63,702	0/0:31,0:31:87.16:0,87,939	0/0:12,0:12:33.06:0,33,356	0/0:17,0:17:48.11:0,48,526	0/0:23,0:23:63.17:0,63,702	0/0:19,0:19:45.12:0,45,501	1/1:2,20:23:56.64:838,57,0	0/0:34,0:34:93.24:0,93,1037	0/0:11,0:11:30.08:0,30,333	0/0:28,0:28:84.23:0,84,936	0/0:27,0:27:66.16:0,66,736	0/0:28,0:28:69.18:0,69,769	0/0:14,0:14:39.11:0,39,435
chr10	22042290	.	TAGACAC	T	2726.76	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=10.477;DP=846;FS=14.295;HRun=0;HaplotypeScore=173.0788;InbreedingCoeff=0.9991;MQ=71.25;MQ0=0;MQRankSum=-10.639;QD=54.54;ReadPosRankSum=1.250;VQSLOD=2.9032;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:60,0:60:99:0,178,5976	0/0:10,0:10:30.10:0,30,1099	0/0:19,0:19:57.20:0,57,1969	0/0:28,0:28:75.21:0,75,2315	0/0:26,0:26:78.24:0,78,2535	0/0:30,0:30:87.30:0,87,3007	0/0:35,0:35:99:0,102,3665	0/0:38,0:38:99:0,111,3829	0/0:29,0:29:87.27:0,87,2995	0/0:25,0:25:72.20:0,72,2467	0/0:20,0:20:54.16:0,54,1886	0/0:33,0:33:96.33:0,96,3475	0/0:38,0:38:99:0,111,4024	0/0:34,0:34:96.33:0,96,3375	1/1:5,45:50:99:2822,123,0	0/0:37,0:37:99:0,111,3992	0/0:30,0:30:90.31:0,90,3279	0/0:11,0:11:33.11:0,33,1191	0/0:22,0:22:66.21:0,66,2120	0/0:39,0:39:99:0,117,3999	0/0:36,0:36:99:0,108,3849	0/0:26,0:26:78.25:0,78,2724	0/0:21,0:21:63.20:0,63,2187	0/0:28,0:28:84.25:0,84,2760	0/0:31,0:31:93.28:0,93,3106	0/0:29,0:29:81.27:0,81,2883	0/0:49,0:49:99:0,148,5304	0/0:12,0:12:36.12:0,36,1319
chr10	22043715	.	ATATGTG	A	8057.18	PASS	AB=1.000;AC=28;AF=0.500;AN=56;BaseQRankSum=9.876;DP=675;FS=0.000;HRun=0;HaplotypeScore=194.5548;InbreedingCoeff=0.6786;MQ=62.98;MQ0=6;MQRankSum=-9.448;QD=20.19;ReadPosRankSum=6.164;VQSLOD=3.9142;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:25:55.42:55,0,141	0/0:11,0:11:18.03:0,18,432	0/0:25,0:13:38.88:0,39,394	0/0:27,0:21:43.56:0,44,504	0/1:21,0:21:74.34:74,0,175	1/1:0,27:29:36.04:769,36,0	1/1:0,14:14:9.03:218,9,0	0/0:30,0:29:81.10:0,81,1150	0/0:23,0:23:48.05:0,48,954	1/1:0,23:24:62.78:776,63,0	1/1:15,3:20:50.99:611,51,0	1/1:2,21:25:23.57:483,24,0	1/1:1,23:24:23.97:569,24,0	1/1:2,25:28:41.44:934,41,0	0/1:32,0:32:99:369,0,105	0/0:25,0:25:59.98:0,60,1188	0/0:23,0:23:45.46:0,45,845	0/0:29,0:29:71.93:0,72,1479	0/0:14,0:14:36.01:0,36,463	0/0:31,0:31:69.01:0,69,1240	0/0:22,0:22:45.04:0,45,905	0/1:23,0:23:85.98:241,0,86	1/1:0,25:26:24.55:548,25,0	0/0:1,15:16:3:0,3,42	1/1:1,24:28:20.01:307,20,0	1/1:2,0:29:78.39:1015,78,0	1/1:0,0:41:56.85:952,57,0	1/1:9,0:9:17.88:134,18,0
chr10	22043717	.	ATGTGTGTGTGTGTGTGTG	A	6420.03	PASS	AB=0.871;AC=10;AF=0.179;AN=56;BaseQRankSum=10.361;DP=678;FS=8.603;HRun=0;HaplotypeScore=313.4406;InbreedingCoeff=0.6784;MQ=60.97;MQ0=6;MQRankSum=-7.566;QD=37.76;ReadPosRankSum=5.556;VQSLOD=2.1771;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:17,0:25:99:366,0,111	0/0:11,0:11:12.04:0,12,908	0/0:27,0:13:15.05:0,15,591	0/0:29,0:21:25.63:0,26,1287	1/1:10,10:20:15.05:730,15,0	0/0:29,0:29:36.12:0,36,1346	0/0:14,0:14:9.03:0,9,362	0/0:30,0:29:51.16:0,51,2528	0/0:21,0:21:42.14:0,42,2424	0/0:26,0:26:50.38:0,50,1837	0/0:21,0:22:45.15:0,45,1845	0/0:24,0:24:24.08:0,24,891	0/0:24,0:24:24.55:0,25,943	0/0:27,0:27:42.62:0,43,1700	1/1:12,0:32:54.19:2264,54,0	0/0:23,0:23:39.13:0,39,2458	0/0:23,0:23:26.86:0,27,1739	0/0:31,0:31:45.15:0,45,3082	0/0:15,0:15:33.11:0,33,1446	0/0:32,0:32:45.14:0,45,2667	0/0:22,0:22:33.11:0,33,2241	1/1:9,14:23:36.12:1769,36,0	0/0:26,0:26:21.65:0,22,932	0/0:18,0:17:3.08:0,3,209	0/0:28,0:28:21.07:0,21,802	0/1:28,0:28:99:569,0,318	1/1:41,0:41:54.17:722,54,0	0/0:6,0:6:6.02:0,6,122
chr10	22043747	.	G	GTA	4260.99	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-12.967;DP=612;FS=1.509;HRun=0;HaplotypeScore=166.4715;InbreedingCoeff=0.9430;MQ=54.92;MQ0=7;MQRankSum=9.036;QD=23.41;ReadPosRankSum=-1.261;VQSLOD=5.0228;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:20.70:0,21,139	1/1:1,12:13:2.32:163,2,0	0/0:29,0:13:32.19:0,32,295	0/0:25,0:13:29.66:0,30,266	0/0:17,0:17:26.65:0,27,181	0/0:26,0:26:35.87:0,36,295	0/0:16,0:16:17.98:0,18,150	1/1:8,24:33:58.75:671,59,0	1/1:1,15:17:24.08:462,24,0	0/0:24,0:24:46.52:0,47,404	0/0:18,0:18:26.85:0,27,215	0/0:19,0:19:29.42:0,29,246	0/0:21,0:21:33.79:0,34,267	0/0:31,0:31:62.80:0,63,524	0/0:23,0:23:52.25:0,52,292	1/1:0,21:22:30.10:576,30,0	1/1:0,17:17:21.07:400,21,0	1/1:4,16:22:22.03:649,22,0	1/1:4,11:15:31.13:370,31,0	1/1:0,21:23:33.04:594,33,0	1/1:5,13:17:23.02:376,23,0	0/0:17,0:17:36.58:0,37,220	0/0:24,0:24:42.17:0,42,349	0/0:21,0:20:11.55:0,12,91	0/0:28,0:28:41.96:0,42,359	0/0:33,0:33:68.74:0,69,558	0/0:41,0:41:77.31:0,77,605	0/0:2,0:2:5.97:0,6,45
chr10	22044810	.	AC	A	9438.87	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-1.845;DP=663;FS=0.942;HRun=1;HaplotypeScore=80.4054;InbreedingCoeff=0.9986;MQ=83.93;MQ0=0;MQRankSum=-7.442;QD=38.68;ReadPosRankSum=2.677;VQSLOD=5.5171;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,111,1769	0/0:7,0:7:21.07:0,21,332	0/0:20,0:20:60.15:0,60,840	0/0:18,0:18:51.07:0,51,728	0/0:25,0:25:75.26:0,75,1199	1/1:0,32:32:87.29:1217,87,0	1/1:0,19:19:51.17:713,51,0	0/0:35,0:35:99:0,102,1559	0/0:23,0:23:69.22:0,69,1078	1/1:0,26:27:81.20:1108,81,0	1/1:0,27:27:72.24:1006,72,0	1/1:0,24:24:63.21:881,63,0	1/1:1,27:28:81.27:1120,81,0	1/1:1,23:24:69.23:961,69,0	0/0:32,0:32:96.33:0,96,1534	0/0:24,0:24:72.25:0,72,1149	0/0:33,0:33:99:0,99,1582	0/0:14,0:14:42.14:0,42,661	0/0:19,0:19:57.19:0,57,911	0/0:32,0:32:96.33:0,96,1525	0/0:18,0:18:54.18:0,54,860	0/0:17,0:17:51.17:0,51,811	1/1:0,25:25:65.85:923,66,0	1/1:0,11:11:33.11:461,33,0	1/1:0,27:27:75.25:1049,75,0	0/0:22,1:23:27.26:0,27,1014	0/0:35,0:35:99:0,105,1645	0/0:7,0:7:21.07:0,21,336
chr10	22045128	.	A	AT	2149.38	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-8.963;DP=495;FS=1.625;HRun=7;HaplotypeScore=45.6633;InbreedingCoeff=0.9403;MQ=64.06;MQ0=0;MQRankSum=0.826;QD=27.56;ReadPosRankSum=0.641;VQSLOD=4.1026;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,24:26:63.19:761,63,0	0/0:9,0:9:27.04:0,27,261	0/0:4,0:4:11.02:0,11,84	0/0:1,0:2:2.50:0,2,9	1/1:2,21:24:37.17:714,37,0	0/0:13,0:13:39.06:0,39,377	0/0:9,0:9:21.03:0,21,203	0/0:43,0:43:99:0,120,1141	0/0:21,0:21:57.09:0,57,550	0/0:19,0:19:51.08:0,51,492	0/0:11,0:11:33.04:0,33,314	0/0:15,0:15:45.06:0,45,428	0/0:16,0:16:39.06:0,39,376	0/0:17,0:17:51.08:0,51,492	1/1:1,16:17:45.14:544,45,0	0/0:22,0:22:60.06:0,60,565	0/0:19,0:19:54.09:0,54,521	0/0:16,0:17:44.10:0,44,411	0/0:22,0:22:57.02:0,57,533	0/0:30,0:30:84.12:0,84,807	0/0:7,0:7:21.03:0,21,203	1/1:1,10:10:24.07:290,24,0	0/0:16,0:17:50.09:0,50,461	0/0:11,0:11:30.01:0,30,278	0/0:24,0:24:63.08:0,63,603	0/0:27,0:27:75.11:0,75,724	0/0:31,0:31:78.12:0,78,753	0/0:11,0:11:33.05:0,33,319
chr10	22046810	.	CT	C	4154.58	PASS	AB=0.857;AC=27;AF=0.482;AN=56;BaseQRankSum=7.538;DP=491;FS=5.334;HRun=11;HaplotypeScore=56.1153;InbreedingCoeff=0.8985;MQ=85.48;MQ0=0;MQRankSum=-2.357;QD=16.82;ReadPosRankSum=3.100;VQSLOD=4.6924;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:22:31.07:0,31,185	0/0:8,0:9:20.89:0,21,206	0/0:15,1:16:12.41:0,12,266	0/0:15,0:16:9.56:0,10,114	0/0:25,0:31:65.65:0,66,604	1/1:4,17:23:55:430,55,0	1/1:0,15:15:44.95:369,45,0	0/0:28,1:29:24.35:0,24,449	0/0:10,0:10:24.05:0,24,250	1/1:7,20:27:35.66:462,36,0	1/1:7,13:20:35.89:295,36,0	1/1:2,16:18:44.93:369,45,0	1/1:3,16:19:20.87:321,21,0	1/1:2,12:14:35.96:296,36,0	0/0:19,0:19:54.14:0,54,576	0/0:18,0:21:47.75:0,48,464	0/0:20,0:20:48.11:0,48,504	0/1:15,3:18:28.82:29,0,339	0/0:14,0:14:30.53:0,31,314	0/0:16,1:17:17.44:0,17,379	0/0:8,0:8:18.05:0,18,192	0/0:12,0:12:24.06:0,24,256	1/1:3,4:7:8.97:74,9,0	1/1:3,4:7:11.98:99,12,0	1/1:1,12:14:34.99:277,35,0	1/1:6,19:26:55.94:446,56,0	1/1:7,26:34:44.94:565,45,0	1/1:0,5:5:14.98:123,15,0
chr10	22047123	.	GC	G	6132.25	PASS	AB=0.909;AC=49;AF=0.875;AN=56;BaseQRankSum=0.628;DP=518;FS=11.591;HRun=10;HaplotypeScore=89.3923;InbreedingCoeff=0.7349;MQ=73.61;MQ0=1;MQRankSum=-1.791;QD=12.91;ReadPosRankSum=4.807;VQSLOD=3.4972;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:19:17.17:0,17,115	1/1:4,0:8:6.10:18,6,0	0/0:13,0:11:3.25:0,3,86	0/1:9,1:9:16.59:17,0,45	1/1:3,24:27:59.48:564,59,0	1/1:2,17:19:47.99:417,48,0	1/1:1,17:18:38.98:339,39,0	1/1:5,0:25:30.54:90,31,0	1/1:1,0:18:32.59:96,33,0	1/1:5,11:16:32.96:282,33,0	1/1:3,11:15:35.02:292,35,0	1/1:3,19:22:53.99:469,54,0	1/1:1,27:28:50.80:670,51,0	1/1:4,19:23:56.99:495,57,0	0/0:8,0:11:21.75:0,22,161	1/1:2,0:19:28.52:84,29,0	1/1:2,0:26:46.85:137,47,0	1/1:2,0:18:32.59:96,33,0	1/1:3,1:20:32.39:110,32,0	1/1:1,0:22:38.70:114,39,0	1/1:2,0:22:38.70:114,39,0	1/1:0,10:10:23.99:208,24,0	1/1:3,7:10:20.99:182,21,0	1/1:2,23:25:71.99:625,72,0	1/1:2,20:22:47.99:417,48,0	1/1:2,2:23:39.94:151,40,0	1/1:1,0:23:40.74:119,41,0	1/1:0,0:5:10.19:30,10,0
chr10	22047424	.	C	CT	5938.80	PASS	AB=0.663;AC=26;AF=0.464;AN=56;BaseQRankSum=-0.769;DP=628;FS=1.095;HRun=11;HaplotypeScore=94.6690;InbreedingCoeff=0.6383;MQ=69.86;MQ0=0;MQRankSum=1.300;QD=16.36;ReadPosRankSum=0.933;VQSLOD=5.3109;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:8,32:41:5.92:658,0,6	0/0:13,0:13:26.86:0,27,207	0/1:18,2:17:54.21:67,0,54	0/0:8,0:7:4.52:0,5,27	0/0:25,0:25:61.78:0,62,470	1/1:4,14:19:38.90:374,39,0	1/1:10,17:28:16.49:516,16,0	0/0:25,0:27:25.72:0,26,311	0/0:16,0:16:35.79:0,36,276	1/1:5,18:25:39.70:558,40,0	0/1:5,9:14:15.99:213,0,16	1/1:7,18:25:26.02:414,26,0	1/1:4,18:23:32.60:447,33,0	1/1:5,19:24:42.08:426,42,0	0/0:30,1:31:50.23:0,50,573	0/0:17,0:18:22.49:0,22,345	0/0:29,0:30:67.58:0,68,503	0/0:15,1:16:35.83:0,36,278	0/0:23,1:25:1.42:0,1,343	0/0:22,1:25:22.35:0,22,347	0/0:11,0:12:25.93:0,26,192	0/0:19,0:19:35.95:0,36,295	1/1:6,12:18:24.96:235,25,0	0/1:10,30:40:40.97:534,0,41	1/1:3,22:27:16.43:489,16,0	1/1:8,19:27:33.82:502,34,0	1/1:7,15:24:0.60:383,1,0	1/1:0,6:6:12.02:122,12,0
chr10	22048391	.	C	CG	852.26	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.916;DP=721;FS=9.697;HRun=6;HaplotypeScore=89.3676;InbreedingCoeff=0.9912;MQ=79.09;MQ0=0;MQRankSum=-3.158;QD=28.41;ReadPosRankSum=0.335;VQSLOD=3.5697;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,120,1217	0/0:7,0:7:18.04:0,18,183	0/0:32,0:32:84.17:0,84,852	0/0:29,0:29:35.61:0,36,567	0/0:31,0:31:69.13:0,69,695	0/0:29,0:29:84.18:0,84,855	0/0:14,0:14:42.10:0,42,428	0/0:31,0:31:57.08:0,57,564	0/0:16,0:16:33.06:0,33,336	0/0:20,0:20:48.10:0,48,489	0/0:18,0:18:39.08:0,39,397	0/0:23,0:23:54.12:0,54,550	0/0:25,0:25:57.12:0,57,581	0/0:30,0:30:84.19:0,84,855	1/1:8,22:30:78.23:947,78,0	0/0:33,0:32:87.16:0,87,874	0/0:34,0:34:93.20:0,93,948	0/0:22,0:22:60.13:0,60,612	0/0:25,0:25:69.15:0,69,703	0/0:16,0:16:33.07:0,33,337	0/0:35,0:35:87.19:0,87,887	0/0:20,0:20:42.09:0,42,427	0/0:24,0:24:48.09:0,48,489	0/0:44,0:44:99:0,108,1102	0/0:20,0:20:51.11:0,51,520	0/0:21,0:21:48.09:0,48,484	0/0:24,0:24:57.12:0,57,580	0/0:14,0:14:39.09:0,39,398
chr10	22048463	.	ATC	A	6259.35	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=15.329;DP=683;FS=0.350;HRun=0;HaplotypeScore=87.4695;InbreedingCoeff=0.9987;MQ=86.65;MQ0=0;MQRankSum=-2.371;QD=38.88;ReadPosRankSum=2.801;VQSLOD=6.6877;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,117,2129	0/0:10,0:10:30.10:0,30,541	0/0:22,0:22:54.11:0,54,890	0/0:25,0:25:73.13:0,73,1264	1/1:2,36:38:99:1461,102,0	0/0:22,0:22:63.22:0,63,1155	0/0:19,0:19:57.20:0,57,1044	0/0:30,0:30:87.28:0,87,1534	0/0:19,0:19:57.20:0,57,1045	0/0:25,0:25:72.20:0,72,1258	0/0:18,0:18:51.17:0,51,922	0/0:24,0:24:72.23:0,72,1288	0/0:27,0:27:78.27:0,78,1430	0/0:28,0:28:78.25:0,78,1399	1/1:3,27:30:81.26:1142,81,0	0/0:29,0:29:87.30:0,87,1561	0/0:27,0:27:78.27:0,78,1429	0/0:11,0:11:30.10:0,30,550	0/0:22,0:22:63.20:0,63,1125	0/0:16,0:16:42.14:0,42,770	0/0:24,0:24:69.22:0,69,1235	1/1:1,23:24:66.22:945,66,0	0/0:29,0:29:81.28:0,81,1483	0/0:30,0:30:87.30:0,87,1595	0/0:24,0:24:69.22:0,69,1235	1/1:2,23:25:20.22:974,20,0	1/1:0,31:31:90.30:1290,90,0	1/1:2,11:13:33.03:447,33,0
chr10	22048833	.	CA	C	2187.98	PASS	AB=0.900;AC=13;AF=0.232;AN=56;BaseQRankSum=-10.492;DP=489;FS=3.232;HRun=10;HaplotypeScore=130.0175;InbreedingCoeff=0.8858;MQ=77.04;MQ0=0;MQRankSum=6.732;QD=17.23;ReadPosRankSum=5.782;VQSLOD=2.7868;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:33:87.05:0,87,932	0/0:3,0:8:17.76:0,18,95	0/1:16,2:17:33.49:33,0,150	0/0:19,0:16:31.15:0,31,284	1/1:2,30:32:83.93:723,84,0	0/0:1,0:17:41.83:0,42,208	0/0:6,0:14:40.03:0,40,215	0/0:17,0:26:57.82:0,58,330	0/0:4,0:13:23.31:0,23,124	0/0:9,0:21:48.46:0,48,254	0/0:10,0:17:31.92:0,32,186	0/0:7,0:17:42.97:0,43,226	0/0:9,0:17:40.07:0,40,210	0/0:6,0:15:40.52:0,41,229	1/1:0,18:18:53.99:469,54,0	0/0:5,0:17:30.25:0,30,150	0/0:5,0:17:36.51:0,37,189	0/0:4,0:19:34.36:0,34,174	0/0:12,0:21:48.63:0,49,272	0/0:7,0:19:49.58:0,50,264	0/0:8,0:13:17.28:0,17,92	1/1:5,9:14:26.99:234,27,0	0/0:3,0:11:31.42:0,31,165	0/0:3,0:12:16.87:0,17,92	0/0:4,0:14:31.60:0,32,164	1/1:4,17:21:50.99:443,51,0	1/1:4,16:20:44.98:391,45,0	1/1:0,3:4:11.04:84,11,0
chr10	22048850	.	CT	C	4544.20	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=6.189;DP=452;FS=2.856;HRun=1;HaplotypeScore=92.8345;InbreedingCoeff=0.9960;MQ=74.80;MQ0=0;MQRankSum=-6.014;QD=32.00;ReadPosRankSum=0.106;VQSLOD=4.5124;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:78.22:0,78,1150	0/0:9,0:9:27.06:0,27,372	0/0:20,0:17:34.97:0,35,504	0/0:18,0:14:26.42:0,26,364	0/0:31,0:31:87.28:0,87,1258	1/1:2,13:15:42.14:560,42,0	1/1:1,13:14:33.11:432,33,0	0/0:30,0:30:87.20:0,87,1189	0/0:12,0:12:29.83:0,30,406	1/1:1,16:18:51.16:657,51,0	1/1:1,11:12:27.05:296,27,0	1/1:0,16:16:39.12:508,39,0	1/1:0,15:15:45.13:572,45,0	1/1:0,16:16:39.01:480,39,0	0/0:23,0:23:69.22:0,69,1025	0/0:17,0:17:39.13:0,39,601	0/0:18,0:18:51.14:0,51,733	0/0:16,0:16:45.05:0,45,620	0/0:16,0:16:44.70:0,45,639	0/0:13,0:13:39.13:0,39,593	0/0:8,0:8:18.04:0,18,257	0/0:9,0:9:27.05:0,27,384	1/1:1,12:13:33.04:400,33,0	1/1:3,6:9:20.72:238,21,0	1/1:1,13:14:30.10:400,30,0	0/0:18,0:18:54.18:0,54,815	0/0:20,0:20:60.13:0,60,793	0/0:6,0:6:18.02:0,18,224
chr10	22049122	.	C	CATAT	5307.24	PASS	AB=0.603;AC=18;AF=0.321;AN=56;BaseQRankSum=-10.543;DP=481;FS=8.350;HRun=0;HaplotypeScore=74.2116;InbreedingCoeff=0.8202;MQ=74.23;MQ0=3;MQRankSum=1.205;QD=37.64;ReadPosRankSum=1.932;VQSLOD=4.1462;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:78.16:0,78,1220	0/0:10,0:10:24.08:0,24,412	0/0:12,0:12:17.84:0,18,164	0/0:9,0:8:2.90:0,3,16	0/0:24,0:24:60.19:0,60,1010	1/1:3,28:31:60.21:1531,60,0	1/1:4,4:9:9.03:229,9,0	0/0:45,0:45:99:0,120,2004	0/0:15,0:15:39.11:0,39,653	1/1:2,11:16:39.09:829,39,0	1/1:7,11:18:24.08:608,24,0	1/1:2,11:13:33.11:803,33,0	0/1:7,4:11:46.50:71,0,46	1/1:4,5:9:15.05:382,15,0	0/0:23,0:23:66.23:0,66,1135	0/0:19,0:19:51.13:0,51,809	0/0:23,0:23:60.16:0,60,991	0/0:20,0:20:51.15:0,51,851	0/0:19,0:19:51.15:0,51,840	0/0:16,0:16:39.12:0,39,642	0/0:8,0:8:15.05:0,15,262	0/0:4,0:4:9.02:0,9,131	0/1:0,8:8:0:0,0,0	1/1:1,2:3:6.02:153,6,0	1/1:2,17:19:29.89:702,30,0	0/0:32,0:32:89.65:0,90,1472	0/0:23,0:23:60.19:0,60,1024	0/0:5,0:5:15.02:0,15,232
chr10	22050641	.	AT	A	9740.19	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=-11.788;DP=559;FS=2.873;HRun=9;HaplotypeScore=65.3005;InbreedingCoeff=0.9792;MQ=75.89;MQ0=0;MQRankSum=-2.076;QD=23.36;ReadPosRankSum=1.954;VQSLOD=5.8957;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,13:14:39.02:357,39,0	1/1:1,6:7:15.01:137,15,0	0/0:21,1:22:20.21:0,20,415	0/0:19,0:20:32.30:0,32,341	0/0:3,0:17:43.01:0,43,246	1/1:5,21:26:57.02:522,57,0	1/1:0,10:10:27.01:247,27,0	1/1:7,37:44:76.44:954,76,0	1/1:2,21:23:60.03:549,60,0	1/1:1,25:26:75.03:686,75,0	1/1:1,15:16:45.02:412,45,0	1/1:1,19:20:54.03:494,54,0	1/1:3,18:21:54.02:494,54,0	1/1:1,21:22:60.03:549,60,0	1/1:5,23:28:69.03:632,69,0	1/1:2,23:25:66.03:604,66,0	1/1:0,14:14:39.02:357,39,0	1/1:1,16:17:48.02:439,48,0	1/1:3,13:16:39.02:357,39,0	1/1:5,17:22:41.99:384,42,0	1/1:0,11:11:33.02:302,33,0	0/0:4,0:16:34.09:0,34,173	1/1:3,13:16:36.01:330,36,0	1/1:1,12:13:33.02:302,33,0	1/1:3,23:25:69.03:632,69,0	0/0:4,0:33:88.31:0,88,465	0/0:1,0:22:48.46:0,48,266	0/0:0,1:12:6.82:0,7,131
chr10	22053031	.	C	CT	331.83	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-1.782;DP=602;FS=0.000;HRun=8;HaplotypeScore=105.9133;InbreedingCoeff=0.8537;MQ=74.68;MQ0=5;MQRankSum=2.260;QD=11.44;ReadPosRankSum=0.167;VQSLOD=2.6468;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:17.38:0,17,63	0/0:8,0:8:17.73:0,18,147	0/0:51,0:22:29.64:0,30,211	0/0:32,0:18:5.01:0,5,72	0/0:32,0:32:82.11:0,82,529	0/0:25,0:25:56.36:0,56,378	0/0:10,0:10:18.73:0,19,127	0/0:31,0:32:67.52:0,68,521	0/0:15,0:15:37.31:0,37,294	0/0:19,0:19:44.57:0,45,314	0/0:29,0:29:80.09:0,80,542	0/0:13,0:13:29.71:0,30,205	0/0:23,0:23:50.50:0,51,347	0/0:24,0:24:62.31:0,62,416	1/1:6,23:29:25.58:425,26,0	0/0:18,0:18:52.79:0,53,437	0/0:24,0:24:57.33:0,57,491	0/0:16,0:18:27.70:0,28,234	0/0:18,0:20:35.12:0,35,238	0/0:19,0:21:51.42:0,51,411	0/0:5,0:6:16.58:0,17,109	0/0:27,0:27:73.59:0,74,492	0/0:14,0:14:35.64:0,36,242	0/0:11,0:11:20.77:0,21,138	0/0:23,0:24:56.04:0,56,366	0/0:22,0:22:56.04:0,56,366	0/0:29,0:29:59.18:0,59,397	0/0:12,0:12:35.41:0,35,228
chr10	22053039	.	TA	T	3738.86	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=-3.664;DP=612;FS=1.639;HRun=12;HaplotypeScore=94.5385;InbreedingCoeff=0.9757;MQ=73.34;MQ0=5;MQRankSum=-0.884;QD=11.87;ReadPosRankSum=5.432;VQSLOD=3.5943;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:14:9.32:39,9,0	0/0:9,0:9:23.95:0,24,213	0/0:62,0:24:21.03:0,21,148	0/0:39,0:20:11.80:0,12,82	1/1:4,0:33:64.87:211,65,0	1/1:3,18:21:49.44:392,49,0	1/1:3,6:9:12.42:94,12,0	0/0:28,0:28:63.11:0,63,604	0/0:14,0:14:21.43:0,21,308	1/1:5,13:18:41.65:306,42,0	1/1:5,27:32:74.31:551,74,0	1/1:2,12:14:23.90:186,24,0	1/1:5,17:22:35.85:278,36,0	1/1:1,21:23:58.81:446,59,0	0/0:26,0:27:47.28:0,47,338	0/0:21,0:21:54.87:0,55,516	0/0:27,0:27:69.87:0,70,623	0/0:15,0:15:27.58:0,28,279	0/0:20,0:20:40.72:0,41,349	0/0:26,0:26:60.78:0,61,558	0/0:9,0:9:10.95:0,11,113	1/1:5,0:26:40.72:119,41,0	1/1:2,12:14:29.88:232,30,0	1/1:1,9:10:20.92:162,21,0	1/1:2,20:22:53.78:416,54,0	1/1:1,1:22:40.33:135,40,0	1/1:3,0:23:34.61:101,35,0	1/1:0,0:12:24.44:71,24,0
chr10	22054041	.	T	TG	4764.21	PASS	AB=0.833;AC=13;AF=0.232;AN=56;BaseQRankSum=14.377;DP=483;FS=4.004;HRun=0;HaplotypeScore=58.2528;InbreedingCoeff=0.8626;MQ=68.73;MQ0=0;MQRankSum=-1.302;QD=34.03;ReadPosRankSum=2.381;VQSLOD=4.3251;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,22:22:60.20:785,60,0	0/0:10,0:10:30.09:0,30,402	0/1:4,0:5:17.02:17,0,18	0/0:4,0:5:1.74:0,2,116	1/1:3,32:35:88.10:1161,88,0	0/0:23,0:23:69.19:0,69,941	0/0:10,0:10:30.10:0,30,419	0/0:22,0:22:66.17:0,66,859	0/0:11,0:11:33.08:0,33,414	0/0:23,0:23:69.22:0,69,937	0/0:15,0:15:45.14:0,45,614	0/0:14,0:14:39.13:0,39,544	0/0:16,0:16:48.13:0,48,622	0/0:15,0:15:42.14:0,42,587	0/0:24,0:24:69.18:0,69,925	0/0:24,0:24:69.22:0,69,949	0/0:18,0:18:54.18:0,54,753	0/0:12,0:12:33.09:0,33,442	0/0:19,0:19:57.10:0,57,709	0/0:27,0:27:75.24:0,75,1032	0/0:6,0:6:15.04:0,15,194	1/1:0,13:13:33.05:413,33,0	0/0:22,0:22:66.19:0,66,886	0/0:11,0:11:27.06:0,27,356	0/0:16,0:16:48.14:0,48,628	1/1:1,24:25:72.22:934,72,0	1/1:0,29:29:78.26:1037,78,0	1/1:0,11:11:33.10:418,33,0
chr10	22054088	.	C	CAGAG	3427.69	PASS	AB=0.945;AC=42;AF=0.778;AN=54;BaseQRankSum=-2.303;DP=648;FS=0.830;HRun=0;HaplotypeScore=132.6972;InbreedingCoeff=0.0933;MQ=65.25;MQ0=25;MQRankSum=-1.191;QD=6.32;ReadPosRankSum=-3.204;VQSLOD=1.8622;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:25,1:26:29.81:537,30,0	1/1:10,0:10:6.01:68,6,0	0/1:41,0:17:0:0,0,0	./.	1/1:38,1:40:18.01:376,18,0	0/1:25,0:27:17.83:286,0,18	1/1:14,0:14:8.91:150,9,0	1/1:31,0:31:9.01:142,9,0	1/1:10,0:10:2.96:19,3,0	1/1:20,0:23:12.51:240,13,0	1/1:13,0:13:3.01:65,3,0	1/1:14,4:19:3.01:70,3,0	0/1:19,0:23:22.58:222,0,23	1/1:11,1:19:11.51:165,12,0	0/0:16,0:26:30.01:0,30,272	0/1:17,0:23:41.19:41,0,71	0/0:20,0:21:18.41:0,18,259	0/1:13,0:13:5.85:6,0,126	1/1:20,0:21:3.99:15,4,0	0/1:25,0:25:15.96:115,0,16	0/1:11,0:11:12.36:67,0,12	1/1:11,0:11:12.04:246,12,0	1/1:24,0:23:2.74:13,3,0	1/1:5,9:14:3.01:70,3,0	1/1:22,0:22:15.04:220,15,0	1/1:26,0:26:10.37:111,10,0	0/1:33,0:34:29.96:67,0,30	1/1:15,0:17:11.98:118,12,0
chr10	22055550	.	C	CA	2946.55	PASS	AB=0.792;AC=23;AF=0.411;AN=56;BaseQRankSum=-7.243;DP=605;FS=3.544;HRun=12;HaplotypeScore=78.6678;InbreedingCoeff=0.2411;MQ=71.24;MQ0=0;MQRankSum=-0.623;QD=8.64;ReadPosRankSum=0.199;VQSLOD=2.9203;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:31:22.90:0,23,288	0/0:6,0:6:17.87:0,18,129	0/1:17,0:15:14.03:14,0,77	0/1:9,0:9:17.45:17,0,22	0/0:8,0:38:28.74:0,29,118	1/1:5,13:18:1.31:336,1,0	0/1:10,15:25:74.36:323,0,74	0/0:18,1:23:20.70:0,21,279	0/1:19,2:21:9.37:9,0,237	1/1:16,16:33:1.23:325,1,0	1/1:10,14:24:29.90:263,30,0	0/1:6,18:24:4.77:277,0,5	1/1:9,20:30:0.90:194,1,0	1/1:2,15:18:26.87:243,27,0	0/1:14,15:30:26.50:276,0,26	0/0:23,0:24:46.73:0,47,334	0/0:17,0:17:35.57:0,36,251	0/1:8,2:10:37.55:38,0,89	0/1:11,2:13:7.61:8,0,91	0/0:23,0:23:1.81:0,2,150	0/0:28,1:29:67.51:0,68,482	0/0:8,0:16:15.15:0,15,57	1/1:4,16:20:21.51:205,22,0	1/1:6,16:24:32.57:269,33,0	0/1:11,11:24:11.89:331,0,12	0/0:9,0:23:26.61:0,27,77	0/0:9,0:17:18.28:0,18,53	0/0:4,0:17:27.41:0,27,92
chr10	22056436	.	CTAAA	C	6934.22	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=15.756;DP=640;FS=4.422;HRun=0;HaplotypeScore=121.2056;InbreedingCoeff=0.9950;MQ=82.47;MQ0=0;MQRankSum=-5.305;QD=39.40;ReadPosRankSum=-0.007;VQSLOD=4.9102;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:39.13:0,39,1002	1/1:0,7:7:21.07:373,21,0	0/0:22,0:22:57.19:0,57,1321	0/0:17,0:17:42.14:0,42,934	0/0:38,0:38:99:0,99,2550	0/0:31,0:31:75.26:0,75,1855	0/0:20,0:20:45.15:0,45,1095	1/1:7,30:37:90.26:1492,90,0	1/1:2,20:22:51.17:907,51,0	0/0:35,0:35:99:0,102,2611	0/0:28,0:28:75.26:0,75,1869	0/0:24,0:24:63.22:0,63,1615	0/0:19,0:19:45.15:0,45,1159	0/0:33,0:33:81.25:0,81,2002	0/0:23,0:23:66.20:0,66,1622	1/1:2,20:22:42.14:747,42,0	1/1:5,24:29:65.91:1173,66,0	1/1:0,7:7:15.05:267,15,0	1/1:5,8:13:24.08:427,24,0	1/1:0,24:24:60.21:1067,60,0	1/1:4,11:15:27.05:480,27,0	0/0:19,0:19:54.19:0,54,1356	0/0:30,0:30:78.27:0,78,1930	0/0:9,0:9:27.09:0,27,686	0/0:24,0:24:63.22:0,63,1589	0/0:30,0:30:84.28:0,84,2039	0/0:37,0:37:96.33:0,96,2405	0/0:8,0:8:18.06:0,18,465
chr10	22057198	.	GTA	G	584.72	PASS	AB=1.000;AC=7;AF=0.152;AN=46;BaseQRankSum=-1.089;DP=207;FS=3.271;HRun=0;HaplotypeScore=52.7655;InbreedingCoeff=0.5601;MQ=69.85;MQ0=3;MQRankSum=3.798;QD=15.80;ReadPosRankSum=1.746;VQSLOD=3.1378;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:9,0:9:0.79:1,0,160	0/0:2,0:2:2.99:0,3,24	0/0:6,0:2:2.68:0,3,11	0/0:14,0:7:0:0,0,0	0/0:6,0:6:6.02:0,6,98	0/0:15,0:15:27.08:0,27,419	./.	0/0:44,0:44:68.98:0,69,656	./.	0/0:4,0:4:6.02:0,6,98	0/0:4,1:5:6.02:0,6,93	0/0:5,0:5:12.04:0,12,194	0/0:2,0:2:6.02:0,6,95	0/0:2,0:2:6.02:0,6,98	0/0:8,0:8:15.02:0,15,194	0/0:4,0:4:5.98:0,6,48	0/0:17,0:17:29.94:0,30,256	0/0:11,0:11:17.93:0,18,140	0/0:8,0:8:17.46:0,17,130	0/0:3,0:3:5.99:0,6,48	./.	0/0:1,0:1:3.01:0,3,48	./.	./.	0/0:10,0:10:18.04:0,18,244	1/1:2,7:9:20.99:229,21,0	1/1:2,8:10:15.05:186,15,0	1/1:1,8:8:24.08:298,24,0
chr10	22057215	.	C	CAT	871.13	PASS	AB=1.000;AC=20;AF=0.385;AN=52;BaseQRankSum=5.720;DP=203;FS=4.825;HRun=0;HaplotypeScore=48.2714;InbreedingCoeff=0.6256;MQ=75.02;MQ0=1;MQRankSum=-3.857;QD=7.78;ReadPosRankSum=1.824;VQSLOD=2.5182;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:7:8.36:0,8,39	1/1:1,0:1:2.99:23,3,0	1/1:8,0:3:2.96:27,3,0	0/1:14,0:9:0.88:2,0,1	1/1:1,5:6:3.01:50,3,0	0/0:11,0:11:30.10:0,30,378	./.	1/1:43,0:43:20.95:361,21,0	0/0:1,0:1:2.37:0,2,8	0/0:4,0:4:12.03:0,12,140	0/0:7,0:7:18.03:0,18,199	0/0:5,0:5:9.03:0,9,114	0/0:3,0:3:6:0,6,62	0/0:4,0:4:12.04:0,12,146	0/0:6,0:6:15.05:0,15,189	1/1:3,0:3:6:57,6,0	0/1:18,0:18:12.38:176,0,12	1/1:9,0:9:14.98:130,15,0	1/1:5,0:5:14.49:120,14,0	1/1:4,0:4:5.98:47,6,0	0/0:2,0:2:4.53:0,5,14	1/1:0,1:1:3.01:50,3,0	0/0:2,0:2:6.02:0,6,75	./.	0/0:9,0:9:21.05:0,21,251	0/0:8,0:8:15.04:0,15,176	0/0:10,0:10:21.05:0,21,246	0/0:12,0:11:30.05:0,30,340
chr10	22057217	.	T	TATAC	3084.57	PASS	AC=20;AF=0.385;AN=52;BaseQRankSum=-1.768;DP=217;FS=0.000;HRun=0;HaplotypeScore=49.9669;InbreedingCoeff=0.7242;MQ=74.58;MQ0=1;MQRankSum=-2.120;QD=31.16;ReadPosRankSum=-0.994;VQSLOD=3.1096;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:7:17.98:0,18,159	1/1:0,1:1:3.01:80,3,0	0/0:8,0:3:1.81:0,2,5	0/0:14,0:9:4.62:0,5,11	0/0:6,0:6:0.54:0,1,21	0/0:11,0:11:30.10:0,30,569	./.	1/1:7,36:50:99:1616,118,0	1/1:1,0:1:2.80:13,3,0	0/0:5,0:5:12.04:0,12,219	0/0:7,0:7:18.06:0,18,306	0/0:5,0:5:12.03:0,12,196	0/0:3,0:3:6.02:0,6,103	0/0:4,0:4:12.04:0,12,226	0/0:7,0:7:21.04:0,21,324	1/1:0,1:3:6.02:117,6,0	1/1:2,14:19:13.18:539,13,0	1/1:1,6:9:18.06:389,18,0	1/1:0,4:5:15.05:313,15,0	1/1:1,5:8:6.02:161,6,0	1/1:2,0:2:5.70:29,6,0	1/1:1,0:1:1.55:4,2,0	0/0:2,0:2:6.02:0,6,93	./.	0/0:8,0:8:24.07:0,24,395	0/0:9,0:9:20.85:0,21,313	0/0:10,0:10:21.07:0,21,387	0/0:12,0:11:30.10:0,30,545
chr10	22058653	.	GGA	G	1951.86	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=0.249;DP=646;FS=0.000;HRun=0;HaplotypeScore=129.7826;InbreedingCoeff=0.9286;MQ=81.44;MQ0=0;MQRankSum=-4.191;QD=13.65;ReadPosRankSum=4.901;VQSLOD=3.3754;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:72.50:0,72,368	0/0:9,0:9:27.09:0,27,524	0/0:24,0:24:65.13:0,65,965	0/0:17,0:16:45.06:0,45,797	1/1:31,0:31:10.23:306,10,0	0/0:25,0:25:63.11:0,63,279	0/0:21,0:21:44.22:0,44,178	0/0:39,0:39:99:0,114,2079	0/0:14,0:14:42.09:0,42,687	0/0:31,0:30:55.71:0,56,311	0/0:19,0:19:25.57:0,26,170	0/0:20,0:20:47.55:0,48,220	0/0:32,0:32:78.69:0,79,342	0/0:32,0:32:81.69:0,82,367	1/1:0,19:19:54.18:849,54,0	0/0:22,0:22:66.21:0,66,1301	0/0:32,0:32:94.83:0,95,1730	0/0:13,0:13:36.11:0,36,690	0/0:16,0:16:45.13:0,45,760	0/0:22,0:22:66.23:0,66,1333	0/0:14,0:14:42.14:0,42,839	1/1:23,0:23:20.89:272,21,0	0/0:24,0:24:61.72:0,62,320	0/0:26,0:26:60.60:0,61,271	0/0:22,0:22:53.22:0,53,254	0/1:25,0:25:0.64:163,0,1	1/1:36,0:36:89.67:435,90,0	1/1:9,0:9:19.91:104,20,0
chr10	22058654	.	GA	G	7985.87	PASS	AB=0.960;AC=35;AF=0.625;AN=56;BaseQRankSum=16.129;DP=640;FS=6.061;HRun=7;HaplotypeScore=96.0610;InbreedingCoeff=0.9278;MQ=81.67;MQ0=0;MQRankSum=-1.458;QD=18.11;ReadPosRankSum=5.566;VQSLOD=4.2643;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,23:27:63.14:642,63,0	0/0:9,0:9:27.08:0,27,329	0/1:23,1:24:9.97:10,0,503	0/0:17,0:16:39.09:0,39,475	1/1:1,0:30:50.92:151,51,0	1/1:2,23:25:66.15:672,66,0	1/1:0,21:21:51.11:517,51,0	0/0:41,0:41:99:0,105,1279	0/0:13,0:13:27.09:0,27,341	1/1:1,30:31:87.18:880,87,0	1/1:1,17:18:45.01:445,45,0	1/1:2,18:20:48.11:489,48,0	1/1:1,30:31:84.19:856,84,0	1/1:2,29:31:84.19:856,84,0	1/1:19,0:19:50.62:240,51,0	0/0:21,0:21:63.20:0,63,793	0/0:33,0:33:81.86:0,82,1043	0/0:12,0:12:33.11:0,33,416	0/0:16,0:16:36.10:0,36,434	0/0:22,0:22:66.21:0,66,832	0/0:15,0:15:45.13:0,45,553	1/1:1,0:23:40.74:122,41,0	1/1:4,20:24:54.12:550,54,0	1/1:1,24:25:63.14:642,63,0	1/1:3,19:22:51.11:520,51,0	1/1:2,1:25:46.26:158,46,0	1/1:0,0:36:65.19:193,65,0	1/1:0,0:9:14.26:42,14,0
chr10	22058778	.	CT	C	316.83	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=1.714;DP=538;FS=2.900;HRun=9;HaplotypeScore=74.1545;InbreedingCoeff=0.9828;MQ=76.84;MQ0=0;MQRankSum=0.129;QD=17.60;ReadPosRankSum=1.508;VQSLOD=4.0175;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:43.96:0,44,265	0/0:8,0:8:24.07:0,24,277	0/0:29,0:28:36.95:0,37,448	0/0:19,0:17:30.81:0,31,318	0/0:18,0:18:49.63:0,50,566	0/0:25,1:26:32.69:0,33,613	0/0:18,1:19:23.67:0,24,517	0/0:29,0:29:54.16:0,54,623	0/0:17,0:17:42.08:0,42,461	0/0:31,0:31:81.22:0,81,921	0/0:15,0:16:38.94:0,39,421	0/0:22,0:22:60.14:0,60,661	0/0:12,0:12:36.06:0,36,394	0/0:22,0:22:51.11:0,51,573	1/1:2,16:18:44.89:412,45,0	0/0:20,1:22:32.53:0,33,602	0/0:17,0:17:51.15:0,51,587	0/0:9,0:9:24.07:0,24,277	0/0:22,1:23:29.81:0,30,596	0/0:27,0:26:69.19:0,69,780	0/0:14,0:14:36.07:0,36,386	0/0:18,0:18:48.13:0,48,544	0/0:23,0:23:63.16:0,63,707	0/0:15,0:15:45.13:0,45,519	0/0:17,0:17:51.14:0,51,578	0/0:21,0:21:51.15:0,51,587	0/0:18,1:18:26.68:0,27,531	0/0:6,0:6:18.05:0,18,208
chr10	22058787	.	T	TC	404.21	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-1.204;DP=524;FS=7.786;HRun=3;HaplotypeScore=70.2658;InbreedingCoeff=0.8565;MQ=76.89;MQ0=0;MQRankSum=-1.847;QD=23.78;ReadPosRankSum=0.169;VQSLOD=2.3489;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,16:17:39.09:499,39,0	0/0:8,0:8:24.06:0,24,273	0/0:26,0:24:39.37:0,39,338	0/0:18,0:16:3.76:0,4,227	0/0:17,0:17:31.19:0,31,480	0/0:20,0:20:57.06:0,57,650	0/0:21,0:21:63.01:0,63,665	0/0:24,0:24:66.17:0,66,751	0/0:16,0:16:42.05:0,42,461	0/0:32,0:32:83.78:0,84,943	0/0:15,0:15:37.70:0,38,426	0/0:21,0:21:57.12:0,57,641	0/0:15,0:15:44.77:0,45,479	0/0:17,0:17:51.14:0,51,596	0/0:19,0:19:52.53:0,53,323	0/0:20,0:20:49.08:0,49,617	0/0:18,0:18:54.14:0,54,624	0/0:10,0:10:27.07:0,27,310	0/0:19,0:19:54.05:0,54,614	0/0:29,0:28:74.90:0,75,827	0/0:15,0:15:42.05:0,42,436	0/0:20,0:20:50.18:0,50,569	0/0:25,0:25:58.96:0,59,702	0/0:15,0:15:45.14:0,45,535	0/0:18,0:18:51.13:0,51,586	0/0:24,0:24:71.77:0,72,758	0/0:19,0:18:57.01:0,57,613	0/0:6,0:6:18.05:0,18,213
chr10	22058880	.	G	GAGAC	621.07	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.273;DP=593;FS=8.034;HRun=0;HaplotypeScore=125.4594;InbreedingCoeff=0.9669;MQ=69.38;MQ0=4;MQRankSum=-4.098;QD=34.50;ReadPosRankSum=-1.218;VQSLOD=3.3591;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,10:17:32.27:716,32,0	0/0:9,0:9:24.08:0,24,440	0/0:33,0:17:31.71:0,32,531	0/0:46,0:34:70.07:0,70,962	0/0:27,0:27:63.20:0,63,1133	0/0:30,0:30:78.23:0,78,1371	0/0:17,0:17:45.15:0,45,844	0/0:34,0:33:78.24:0,78,1304	0/0:22,0:22:60.21:0,60,1108	0/0:15,0:15:39.13:0,39,708	0/0:20,0:20:51.17:0,51,942	0/0:20,0:20:54.19:0,54,1014	0/0:14,0:14:36.12:0,36,658	0/0:23,0:23:66.23:0,66,1213	0/0:25,0:25:60.21:0,60,1124	0/0:15,0:15:45.15:0,45,839	0/0:24,0:24:63.19:0,63,1155	0/0:12,0:12:33.11:0,33,609	0/0:16,0:16:48.16:0,48,876	0/0:24,0:24:69.24:0,69,1271	0/0:12,0:12:36.11:0,36,645	0/0:21,0:21:54.19:0,54,990	0/0:14,0:14:36.11:0,36,626	0/0:13,0:13:33.11:0,33,612	0/0:23,0:23:69.22:0,69,1263	0/0:31,0:31:87.29:0,87,1592	0/0:30,0:30:72.11:0,72,1313	0/0:5,0:5:12.04:0,12,228
chr10	22058897	.	A	AG	579.12	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.451;DP=535;FS=2.833;HRun=7;HaplotypeScore=92.9077;InbreedingCoeff=0.9708;MQ=62.33;MQ0=4;MQRankSum=-4.455;QD=15.65;ReadPosRankSum=2.058;VQSLOD=3.6692;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:17:21.29:112,21,0	0/0:7,0:7:12.01:0,12,116	0/0:26,0:11:24.51:0,25,232	0/0:32,0:23:36.64:0,37,388	0/0:26,0:26:48.07:0,48,462	0/0:32,0:32:75.11:0,75,723	0/0:16,0:16:29.96:0,30,289	0/0:26,0:26:52.25:0,52,504	0/0:18,0:18:42.06:0,42,405	0/0:16,0:16:30.04:0,30,290	0/0:25,0:25:57.09:0,57,550	0/0:20,0:20:33.03:0,33,319	0/0:10,0:10:18.02:0,18,174	0/0:20,0:20:39.03:0,39,371	1/1:3,17:20:51.10:588,51,0	0/0:15,0:15:42.07:0,42,405	0/0:23,0:23:53.87:0,54,521	0/0:11,0:11:24.04:0,24,231	0/0:19,0:19:51.08:0,51,492	0/0:21,0:21:54.07:0,54,514	0/0:11,0:11:27.04:0,27,261	0/0:17,0:17:36.03:0,36,339	0/0:9,0:9:21.03:0,21,202	0/0:14,0:14:36.04:0,36,341	0/0:25,0:25:57.07:0,57,549	0/0:26,0:26:66.05:0,66,628	0/0:23,0:23:44.78:0,45,434	0/0:9,0:9:21.03:0,21,202
chr10	22058901	.	G	GT	156.34	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=6.069;DP=522;FS=0.844;HRun=0;HaplotypeScore=95.4300;InbreedingCoeff=0.6312;MQ=64.59;MQ0=2;MQRankSum=-4.130;QD=4.34;ReadPosRankSum=4.521;VQSLOD=3.3607;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,6:14:19.04:117,19,0	0/0:5,0:5:15.02:0,15,190	0/0:22,0:12:27.97:0,28,370	0/0:31,0:24:64.07:0,64,725	0/0:27,0:27:60.15:0,60,771	0/0:29,0:29:78.24:0,78,1069	0/0:15,0:15:38.99:0,39,491	0/0:28,0:27:81.05:0,81,980	0/0:17,0:17:51.14:0,51,663	0/0:19,0:19:51.12:0,51,615	0/0:25,0:25:63.09:0,63,838	0/0:18,0:18:51.07:0,51,610	0/0:9,0:9:24.06:0,24,302	0/0:20,0:20:57.13:0,57,700	0/1:22,0:22:28.55:143,0,29	0/0:14,0:14:42.14:0,42,586	0/0:22,0:22:60.17:0,60,803	0/0:11,0:11:27.06:0,27,356	0/0:21,0:21:60.17:0,60,803	0/0:21,0:21:60.16:0,60,798	0/0:11,0:11:33.08:0,33,427	0/0:15,0:15:39.08:0,39,521	0/0:10,0:10:27.01:0,27,336	0/0:13,0:13:39.11:0,39,525	0/0:24,0:24:72.15:0,72,919	0/0:28,0:28:81.19:0,81,1045	0/0:20,0:20:47.86:0,48,647	0/0:9,0:9:21.07:0,21,293
chr10	22058903	.	G	GGGGGA	517.39	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.277;DP=519;FS=1.162;HRun=0;HaplotypeScore=134.9484;InbreedingCoeff=0.9735;MQ=63.88;MQ0=1;MQRankSum=-5.026;QD=34.49;ReadPosRankSum=-0.057;VQSLOD=3.6921;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,6:15:32.48:612,32,0	0/0:5,0:5:15.02:0,15,264	0/0:22,0:12:30.44:0,30,515	0/0:29,0:22:59.25:0,59,786	0/0:25,0:25:54.16:0,54,947	0/0:31,0:31:78.20:0,78,1430	0/0:15,0:15:39.06:0,39,637	0/0:29,0:29:78.13:0,78,1230	0/0:15,0:15:42.13:0,42,826	0/0:17,0:17:48.09:0,48,768	0/0:25,0:25:63.15:0,63,1162	0/0:18,0:18:42.04:0,42,738	0/0:9,0:9:21.04:0,21,353	0/0:20,0:20:51.09:0,51,812	0/0:22,0:22:34.33:0,34,339	0/0:15,0:15:42.13:0,42,814	0/0:22,0:22:57.18:0,57,1095	0/0:10,0:10:27.02:0,27,465	0/0:22,0:22:63.19:0,63,1166	0/0:21,0:21:59.51:0,60,1015	0/0:11,0:11:30.08:0,30,550	0/0:15,0:15:42.05:0,42,708	0/0:10,0:10:30.03:0,30,470	0/0:13,0:13:39.12:0,39,719	0/0:26,0:26:65.88:0,66,1111	0/0:25,0:25:71:0,71,1317	0/0:20,0:20:45.13:0,45,874	0/0:11,0:11:21.07:0,21,406
chr10	22058934	.	TTTTTC	T	5060.29	PASS	AB=1.000;AC=31;AF=0.554;AN=56;BaseQRankSum=12.082;DP=538;FS=14.489;HRun=0;HaplotypeScore=134.8200;InbreedingCoeff=0.7079;MQ=70.60;MQ0=4;MQRankSum=-4.539;QD=15.33;ReadPosRankSum=4.577;VQSLOD=3.5775;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,12:15:27.02:462,27,0	0/0:4,0:4:12.04:0,12,321	0/0:39,0:28:76.41:0,76,1573	0/0:29,0:21:34.36:0,34,996	1/1:3,24:27:62.93:941,63,0	0/1:32,0:32:9.73:37,0,10	1/1:17,0:17:4.19:14,4,0	0/0:32,0:32:83.78:0,84,2099	0/0:12,0:12:36.12:0,36,928	0/1:19,0:19:27.19:27,0,28	0/1:22,0:22:20.07:20,0,31	1/1:12,0:12:8.69:21,9,0	1/1:12,0:12:8.52:19,9,0	1/1:22,0:22:15.40:48,15,0	1/1:27,0:27:3.59:702,4,0	0/0:16,0:16:45.15:0,45,1202	0/0:14,0:14:39.11:0,39,914	0/0:7,0:7:20.96:0,21,537	0/0:27,0:27:72.23:0,72,1760	0/0:21,0:21:60.19:0,60,1632	0/0:7,0:7:18.06:0,18,501	1/1:0,12:12:36.12:701,36,0	1/1:9,0:9:7.63:32,8,0	1/1:12,0:12:12.27:27,12,0	1/1:26,0:26:13.52:49,14,0	1/1:3,22:25:66.60:1027,67,0	1/1:4,22:26:24.97:467,25,0	1/1:0,14:14:24.08:468,24,0
chr10	22058935	.	TTTTC	T	5101.12	PASS	AB=1.000;AC=33;AF=0.589;AN=56;BaseQRankSum=13.216;DP=535;FS=4.415;HRun=0;HaplotypeScore=124.8425;InbreedingCoeff=0.9371;MQ=72.30;MQ0=4;MQRankSum=-5.406;QD=15.55;ReadPosRankSum=3.403;VQSLOD=4.0586;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:15:27.02:284,27,0	0/0:4,0:4:12.04:0,12,286	0/0:40,0:29:69.34:0,69,1385	0/0:30,0:22:27.84:0,28,863	1/1:26,0:26:62.90:605,63,0	1/1:31,1:32:63.54:402,64,0	1/1:16,0:16:28.69:159,29,0	0/0:30,0:30:83.40:0,83,1838	0/0:12,0:12:36.11:0,36,799	1/1:19,0:19:41.18:246,41,0	1/1:22,0:22:47.54:273,48,0	1/1:12,0:12:26.30:150,26,0	1/1:13,0:13:23.36:133,23,0	1/1:20,1:21:38.10:252,38,0	0/1:29,0:29:4.45:303,0,4	0/0:16,0:16:45.14:0,45,1030	0/0:14,0:14:39.11:0,39,820	0/0:7,0:7:19.62:0,20,447	0/0:27,0:27:72.21:0,72,1575	0/0:21,0:21:60.19:0,60,1402	0/0:6,0:6:18.06:0,18,439	1/1:12,0:12:36.10:405,36,0	1/1:8,1:9:21.20:171,21,0	1/1:12,0:12:32.17:184,32,0	1/1:24,1:25:49.12:313,49,0	1/1:25,0:25:69.06:680,69,0	1/1:25,0:25:25.31:271,25,0	1/1:14,0:14:24.07:271,24,0
chr10	22058936	.	TTTC	T	8211.91	PASS	AB=1.000;AC=33;AF=0.589;AN=56;BaseQRankSum=11.752;DP=534;FS=1.601;HRun=0;HaplotypeScore=104.7249;InbreedingCoeff=0.9214;MQ=72.40;MQ0=4;MQRankSum=-6.010;QD=25.27;ReadPosRankSum=3.697;VQSLOD=5.1329;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:14:23.98:218,24,0	0/0:4,0:4:12.04:0,12,242	0/0:40,0:29:62.67:0,63,1117	0/0:31,0:23:26.91:0,27,734	1/1:26,0:26:62.77:515,63,0	1/1:5,27:32:74.74:1061,75,0	1/1:1,15:16:30.10:462,30,0	0/0:31,0:31:85.75:0,86,1558	0/0:13,0:13:39.10:0,39,694	1/1:4,15:19:53.64:651,54,0	1/1:4,18:22:59.60:740,60,0	1/1:2,10:12:27.09:424,27,0	1/1:0,13:13:24.06:377,24,0	1/1:2,19:21:39.13:593,39,0	0/1:29,0:29:12.23:211,0,12	0/0:15,0:15:45.14:0,45,856	0/0:14,0:14:39.10:0,39,692	0/0:8,0:8:16.24:0,16,382	0/0:26,0:26:75.21:0,75,1340	0/0:21,0:21:60.16:0,60,1146	0/0:6,0:6:18.06:0,18,364	1/1:12,0:12:36.04:335,36,0	1/1:5,4:9:26.99:308,27,0	1/1:1,11:12:33.11:519,33,0	1/1:4,21:25:51.17:773,51,0	1/1:24,0:24:68.62:578,69,0	1/1:24,0:24:25.17:224,25,0	1/1:14,0:14:24.03:224,24,0
chr10	22058937	.	TTC	T	5433.76	PASS	AB=1.000;AC=33;AF=0.589;AN=56;BaseQRankSum=13.596;DP=532;FS=2.065;HRun=0;HaplotypeScore=105.7747;InbreedingCoeff=0.9179;MQ=74.00;MQ0=4;MQRankSum=-6.210;QD=16.98;ReadPosRankSum=3.716;VQSLOD=4.9644;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:14:25.07:173,25,0	0/0:4,0:4:12.04:0,12,194	0/0:42,0:31:66.18:0,66,923	0/0:31,0:23:21.28:0,21,566	1/1:26,0:26:62.38:434,62,0	1/1:28,3:31:74.95:683,75,0	1/1:16,0:16:29.87:243,30,0	0/0:30,0:30:85.47:0,85,1273	0/0:14,0:14:42:0,42,574	1/1:16,3:19:53.86:469,54,0	1/1:18,4:22:59.64:521,60,0	1/1:11,0:11:26.97:227,27,0	1/1:13,0:13:23.97:202,24,0	1/1:21,0:21:38.94:325,39,0	0/1:29,0:29:22.65:140,0,23	0/0:15,0:15:45.13:0,45,683	0/0:13,0:13:39.08:0,39,546	0/0:8,0:8:18.29:0,18,311	0/0:28,0:28:81.10:0,81,1125	0/0:21,0:21:56.24:0,56,889	0/0:6,0:6:18.06:0,18,290	1/1:12,0:12:35.80:263,36,0	1/1:9,0:9:25.49:198,25,0	1/1:11,0:11:32.96:278,33,0	1/1:23,0:23:50.82:418,51,0	1/1:24,0:24:68.37:506,68,0	1/1:24,0:24:25.59:178,26,0	1/1:14,0:14:23.86:176,24,0
chr10	22058939	.	CTTTTT	C	3459.60	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=3.608;DP=530;FS=9.460;HRun=9;HaplotypeScore=138.6520;InbreedingCoeff=0.9853;MQ=76.60;MQ0=4;MQRankSum=-6.252;QD=24.89;ReadPosRankSum=0.909;VQSLOD=0.3754;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:13:23.35:294,23,0	0/0:4,0:4:12.04:0,12,364	0/0:42,0:31:89.79:0,90,2004	0/0:32,0:25:48.70:0,49,1258	1/1:25,0:25:45.78:517,46,0	0/0:31,0:31:73.94:0,74,629	0/0:15,0:15:29.77:0,30,232	0/0:30,0:30:87.30:0,87,2530	0/0:14,0:14:42.13:0,42,1143	0/0:18,0:18:50.54:0,51,462	0/0:23,0:23:59.66:0,60,516	0/0:10,0:10:26.69:0,27,189	0/0:13,0:13:23.60:0,24,169	0/0:20,0:20:36.57:0,37,270	1/1:2,25:27:54.17:1135,54,0	0/0:15,0:15:45.14:0,45,1374	0/0:15,0:15:45.14:0,45,1158	0/0:9,0:9:27.04:0,27,694	0/0:29,0:29:87.28:0,87,2199	0/0:20,0:20:60.21:0,60,1843	0/0:6,0:6:18.06:0,18,566	1/1:12,0:12:36.11:453,36,0	0/0:9,0:9:16.36:0,16,118	0/0:12,0:12:35.88:0,36,286	0/0:23,0:23:52.92:0,53,410	1/1:25,0:25:14.37:476,14,0	1/1:22,0:22:24:297,24,0	1/1:14,0:14:24.07:288,24,0
chr10	22059999	.	TA	T	1339.36	PASS	AB=0.990;AC=26;AF=0.464;AN=56;BaseQRankSum=13.351;DP=600;FS=0.000;HRun=1;HaplotypeScore=123.8895;InbreedingCoeff=0.3530;MQ=85.57;MQ0=0;MQRankSum=-2.938;QD=3.61;ReadPosRankSum=8.784;VQSLOD=-0.4035;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:31,1:32:1.53:133,2,0	0/0:13,0:13:39.13:0,39,614	0/0:23,0:23:55.48:0,55,855	0/0:17,0:17:48.02:0,48,632	1/1:23,0:23:26.15:174,26,0	0/1:21,1:22:31.24:62,0,31	0/1:24,0:24:64.31:64,0,94	0/0:32,0:32:96.15:0,96,1313	0/0:18,0:18:53.87:0,54,744	1/1:16,2:18:2:151,2,0	0/1:27,1:28:21.50:125,0,22	1/1:18,0:18:5.54:59,6,0	1/1:29,0:29:8.49:132,8,0	1/1:23,0:23:15.24:111,15,0	1/1:21,0:21:11.48:67,11,0	0/0:19,0:19:57.15:0,57,828	0/0:29,0:29:87.24:0,87,1290	0/0:11,0:11:33:0,33,442	0/0:19,0:19:54.10:0,54,742	0/0:26,0:26:75.24:0,75,1127	0/0:22,0:22:43.75:0,44,794	0/1:17,0:17:14.28:54,0,14	1/1:14,0:15:27.02:108,27,0	0/1:22,0:22:28:70,0,28	1/1:20,0:20:5.87:74,6,0	0/1:27,0:27:18.73:51,0,19	0/1:23,0:23:6.02:67,0,6	0/1:9,0:9:5.20:28,0,5
chr10	22060000	.	AC	A	8866.47	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=8.915;DP=596;FS=2.856;HRun=8;HaplotypeScore=99.9662;InbreedingCoeff=0.9710;MQ=86.28;MQ0=0;MQRankSum=-3.120;QD=24.03;ReadPosRankSum=5.210;VQSLOD=4.8264;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,27:31:81.13:782,81,0	0/0:13,0:13:39.10:0,39,449	0/0:24,0:24:54.62:0,55,622	0/0:17,0:17:35.60:0,36,403	1/1:3,21:24:63.10:608,63,0	1/1:4,18:22:51.08:492,51,0	1/1:5,18:23:48.07:463,48,0	0/0:31,0:31:69.14:0,69,776	0/0:17,0:17:42.11:0,42,494	1/1:3,15:18:51.02:477,51,0	1/1:4,24:28:69.11:666,69,0	1/1:1,17:18:45.07:435,45,0	1/1:2,27:29:75.12:724,75,0	1/1:1,22:23:54.09:521,54,0	1/1:1,20:21:54.09:522,54,0	0/0:19,0:19:51.15:0,51,606	0/0:29,0:29:78.20:0,78,923	0/0:11,0:11:24.07:0,24,290	0/0:18,0:18:39.12:0,39,471	0/0:27,0:27:78.21:0,78,918	0/0:19,2:21:2.20:0,2,559	1/1:2,14:16:39.05:372,39,0	1/1:1,14:15:39.06:376,39,0	1/1:4,18:22:51.08:492,51,0	1/1:1,19:20:45.07:435,45,0	1/1:2,25:27:75.11:720,75,0	1/1:2,21:23:56.98:550,57,0	1/1:1,8:9:24.04:232,24,0
chr10	22061037	.	CTTTT	C	5771.40	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-11.487;DP=472;FS=14.219;HRun=13;HaplotypeScore=100.4660;InbreedingCoeff=0.9732;MQ=72.90;MQ0=1;MQRankSum=-2.170;QD=31.37;ReadPosRankSum=3.143;VQSLOD=2.2967;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:29:63.17:0,63,815	0/0:1,0:4:5.85:0,6,34	0/0:21,0:13:22.59:0,23,330	0/0:15,0:13:27:0,27,402	0/0:4,0:13:27:0,27,347	1/1:1,13:14:33.10:483,33,0	1/1:2,20:22:54.17:790,54,0	0/0:8,0:26:58.80:0,59,380	0/0:2,0:18:33.04:0,33,202	1/1:7,12:19:36.01:526,36,0	1/1:3,13:16:39.11:570,39,0	1/1:4,14:18:33.07:483,33,0	1/1:3,13:16:39.09:570,39,0	1/1:2,11:13:27.07:395,27,0	0/0:2,0:17:33.11:0,33,645	0/0:3,0:16:44.08:0,44,280	0/0:5,0:16:24.24:0,24,151	0/0:5,0:27:55.28:0,55,324	0/0:4,0:19:45.59:0,46,263	0/0:3,0:7:14.87:0,15,143	0/0:4,0:12:29.48:0,29,217	0/0:1,0:8:15.96:0,16,203	1/1:1,16:17:36.09:526,36,0	1/1:4,25:30:57.10:814,57,0	1/1:3,16:19:42.12:614,42,0	0/0:3,0:15:38.12:0,38,253	0/0:3,0:17:29.22:0,29,170	0/0:2,0:6:11.70:0,12,68
chr10	22063374	.	AC	A	9120.95	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=16.990;DP=710;FS=0.614;HRun=1;HaplotypeScore=88.4389;InbreedingCoeff=0.9986;MQ=73.53;MQ0=1;MQRankSum=-0.605;QD=37.85;ReadPosRankSum=1.507;VQSLOD=5.2958;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:60.18:0,60,914	1/1:0,10:10:27.09:378,27,0	0/0:24,0:21:59.66:0,60,902	0/0:20,0:18:39.12:0,39,574	0/0:31,0:31:87.28:0,87,1367	0/0:29,0:29:87.29:0,87,1361	0/0:21,0:21:63.21:0,63,1007	1/1:0,35:34:99:1392,102,0	1/1:0,23:23:66.22:921,66,0	0/0:45,0:45:99:0,135,2083	0/0:30,0:30:87.30:0,87,1390	0/0:28,0:28:84.23:0,84,1251	0/0:29,0:29:87.28:0,87,1346	0/0:21,0:21:63.20:0,63,964	1/1:0,27:27:75.25:1047,75,0	1/1:0,31:31:87.29:1215,87,0	1/1:0,20:20:39.13:546,39,0	1/1:2,17:19:48.16:671,48,0	1/1:0,18:18:54.18:753,54,0	1/1:0,34:34:93.18:1232,93,0	1/1:0,24:24:69.23:965,69,0	0/0:17,0:17:51.17:0,51,815	0/0:41,0:41:99:0,111,1763	0/0:20,0:20:57.19:0,57,911	0/0:28,0:28:81.28:0,81,1285	0/0:23,0:23:69.23:0,69,1093	0/0:35,0:35:99:0,105,1672	0/0:6,0:6:18.06:0,18,277
chr10	22063697	.	TTCTCTCTCTC	T	429.28	PASS	AB=0.900;AC=10;AF=0.263;AN=38;BaseQRankSum=1.562;DP=464;FS=8.861;HRun=0;HaplotypeScore=129.2974;InbreedingCoeff=0.4898;MQ=59.12;MQ0=15;MQRankSum=-2.661;QD=5.05;ReadPosRankSum=-0.363;VQSLOD=1.9697;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:11,0:11:6.02:0,6,198	./.	./.	./.	1/1:11,5:16:3.48:83,3,0	0/1:12,4:15:16.95:76,0,17	0/0:36,0:32:26.45:0,26,727	0/0:14,0:14:15.04:0,15,557	1/1:15,0:16:9.03:229,9,0	./.	./.	1/1:6,3:9:6.02:153,6,0	./.	1/1:13,0:16:0.47:1,0,0	0/0:19,0:22:18.06:0,18,492	0/0:15,0:14:11.95:0,12,166	0/0:9,0:8:6.02:0,6,251	0/0:16,0:15:7.38:0,7,283	0/0:19,0:19:3.01:0,3,38	0/0:23,0:22:5.38:0,5,103	./.	0/1:12,0:12:0:0,0,0	./.	0/0:8,0:9:0.47:0,0,1	0/0:16,0:17:26.44:0,26,826	0/0:31,0:31:12.74:0,13,506	0/0:12,0:11:12.04:0,12,497
chr10	22063739	.	C	CTGTGTGTG	467.24	PASS	AB=0.956;AC=6;AF=0.107;AN=56;BaseQRankSum=4.903;DP=515;FS=9.787;HRun=0;HaplotypeScore=152.3416;InbreedingCoeff=-0.0512;MQ=46.51;MQ0=31;MQRankSum=-2.505;QD=4.29;ReadPosRankSum=-0.380;VQSLOD=2.1385;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:60.21:0,60,1691	0/0:8,0:8:6.46:0,6,72	0/0:4,0:2:3.01:0,3,54	0/0:5,0:1:3.01:0,3,40	0/0:22,0:21:39.13:0,39,1077	0/0:16,0:16:9.98:0,10,508	0/0:29,0:25:23.55:0,24,642	0/0:27,0:21:56.91:0,57,1126	0/0:18,0:18:15.49:0,15,300	0/1:20,0:18:42.02:42,0,793	0/0:14,0:13:24.08:0,24,642	0/0:29,0:27:36.59:0,37,962	0/0:21,0:21:9.64:0,10,818	0/0:19,0:19:30.10:0,30,805	0/1:16,0:16:0:0,0,0	0/0:21,0:21:38.94:0,39,504	0/0:21,0:19:16.09:0,16,277	0/0:13,0:10:21.92:0,22,329	0/0:15,0:12:32.98:0,33,600	0/0:17,0:17:6.02:0,6,115	0/0:16,0:13:5.19:0,5,60	0/0:10,0:10:21.03:0,21,497	0/1:13,0:13:10.12:10,0,317	0/0:30,0:27:24.08:0,24,673	0/0:19,0:18:42.09:0,42,1144	0/1:14,7:18:99:278,0,402	0/1:28,0:25:99:193,0,309	0/1:10,0:7:57.67:58,0,306
chr10	22063743	.	C	CTG	451.44	PASS	AB=0.935;AC=13;AF=0.232;AN=56;BaseQRankSum=5.746;DP=527;FS=1.652;HRun=0;HaplotypeScore=120.5677;InbreedingCoeff=-0.0584;MQ=46.89;MQ0=27;MQRankSum=0.777;QD=2.22;ReadPosRankSum=1.831;VQSLOD=2.5291;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:62.86:0,63,512	0/1:8,0:8:8.02:9,0,8	0/0:6,0:3:2.87:0,3,15	0/0:8,0:2:5.75:0,6,39	0/0:21,0:20:41.69:0,42,317	0/0:18,0:18:24.81:0,25,181	0/0:29,0:25:24.09:0,24,181	0/0:27,0:21:14.31:0,14,282	0/1:16,0:16:5.44:5,0,34	0/0:23,0:21:23.93:0,24,326	0/0:16,0:15:26.93:0,27,216	0/0:30,0:28:41.64:0,42,323	0/0:23,0:23:39.95:0,40,291	0/0:20,0:20:31.72:0,32,241	0/1:16,0:16:0:0,0,0	0/1:19,0:19:15.30:154,0,15	0/1:8,12:19:3.28:3,0,58	0/1:11,0:10:46.14:75,0,46	0/1:18,0:14:55.45:55,0,136	0/1:11,6:17:4.80:5,0,13	1/1:9,6:13:1.58:41,2,0	0/0:11,0:11:20.97:0,21,172	0/0:12,0:12:14.98:0,15,124	0/0:29,0:27:26.95:0,27,218	0/0:19,0:18:44.95:0,45,376	0/1:22,0:18:39.06:119,0,39	0/1:30,0:27:32.09:99,0,32	0/1:9,0:8:22.53:23,0,86
chr10	22063745	.	C	CTGTG	1486.91	PASS	AB=0.952;AC=17;AF=0.304;AN=56;BaseQRankSum=2.414;DP=536;FS=4.533;HRun=0;HaplotypeScore=133.9398;InbreedingCoeff=0.2307;MQ=46.93;MQ0=26;MQRankSum=1.059;QD=6.88;ReadPosRankSum=1.108;VQSLOD=2.4071;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:60.15:0,60,980	1/1:9,0:9:2.85:61,3,0	0/0:6,0:3:5.85:0,6,49	0/0:11,0:5:8.97:0,9,89	0/0:21,0:20:29.88:0,30,410	0/0:21,0:21:24.95:0,25,271	0/0:29,0:25:8.12:0,8,204	0/1:27,0:21:45.58:46,0,201	0/1:8,7:16:45.90:46,0,57	0/0:22,0:21:21.38:0,21,307	0/0:16,0:15:33.03:0,33,402	0/0:30,0:28:33.89:0,34,444	0/0:23,0:23:34.85:0,35,409	0/0:20,0:20:31.31:0,31,342	0/0:16,0:16:0:0,0,0	1/1:19,0:19:33.71:427,34,0	1/1:19,0:18:2.58:34,3,0	0/1:13,0:11:31.71:244,0,32	0/1:18,0:14:85.59:174,0,86	1/1:17,0:17:4.70:33,5,0	1/1:17,0:14:2.43:66,2,0	0/0:11,0:11:24.01:0,24,246	0/0:12,0:12:15.05:0,15,246	0/0:29,0:27:30.09:0,30,458	0/0:19,0:18:45.09:0,45,498	0/1:22,0:17:79.34:216,0,79	0/1:30,0:27:33.93:242,0,34	0/1:9,0:8:62.78:63,0,102
chr10	22063747	.	C	CTGTGTG	3844.30	PASS	AB=1.000;AC=28;AF=0.500;AN=56;BaseQRankSum=-3.363;DP=564;FS=57.005;HRun=0;HaplotypeScore=154.0024;InbreedingCoeff=0.5448;MQ=46.70;MQ0=25;MQRankSum=-4.591;QD=11.98;ReadPosRankSum=-1.335;VQSLOD=0.5133;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:69.17:0,69,1299	1/1:1,5:9:2.74:98,3,0	0/0:7,0:3:5.98:0,6,80	0/0:12,0:6:6.10:0,6,115	0/1:21,0:20:14.98:15,0,210	0/0:22,0:22:7.61:0,8,154	0/1:30,0:26:39.11:39,0,94	1/1:28,0:21:23.94:306,24,0	1/1:16,0:16:8.95:121,9,0	0/1:22,0:21:99:129,0,106	0/0:16,0:15:28.04:0,28,277	0/0:32,0:30:5.98:0,6,210	0/1:24,0:24:8.08:8,0,136	0/0:20,0:20:14.62:0,15,175	0/0:24,0:23:0.47:0,0,1	1/1:18,0:19:39.56:721,40,0	1/1:19,0:18:6.46:74,6,0	1/1:13,1:12:2.33:471,2,0	1/1:10,8:16:32.95:535,33,0	1/1:19,0:19:9.46:93,9,0	1/1:17,1:16:6:114,6,0	0/0:13,0:13:17.31:0,17,93	0/0:14,0:14:15.02:0,15,219	0/0:30,0:28:30.10:0,30,437	0/0:19,0:18:37.44:0,37,201	1/1:23,0:19:37.68:520,38,0	1/1:30,0:27:24.82:434,25,0	1/1:9,0:8:11.99:167,12,0
chr10	22064354	.	GA	G	3725.50	PASS	AB=0.789;AC=21;AF=0.375;AN=56;BaseQRankSum=9.437;DP=528;FS=0.000;HRun=11;HaplotypeScore=92.1044;InbreedingCoeff=0.7775;MQ=75.98;MQ0=0;MQRankSum=-0.239;QD=16.06;ReadPosRankSum=3.183;VQSLOD=4.2139;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:42.06:0,42,419	0/0:12,0:12:33.05:0,33,341	0/0:17,0:16:3.81:0,4,201	0/1:12,1:13:22.54:23,0,45	0/0:28,0:28:67.40:0,67,697	1/1:3,21:24:29.54:458,30,0	1/1:2,15:17:41.94:345,42,0	0/0:25,0:25:53.57:0,54,533	0/0:19,0:19:53.89:0,54,530	1/1:7,22:29:36.91:510,37,0	1/1:7,23:30:59.88:492,60,0	1/1:3,11:14:23.97:197,24,0	0/1:6,10:16:2.03:192,0,2	1/1:4,10:14:28.28:243,28,0	0/0:16,0:16:45.11:0,45,480	0/1:11,3:14:36.97:37,0,247	0/0:22,0:22:58.39:0,58,609	0/0:13,0:14:32.03:0,32,323	0/0:16,1:17:17.46:0,17,390	0/0:16,0:16:42.09:0,42,434	0/0:12,0:12:33.08:0,33,352	0/0:9,0:9:20.08:0,20,197	1/1:3,20:23:56.06:466,56,0	1/1:1,12:13:35.96:296,36,0	1/1:3,22:25:56.93:468,57,0	0/0:25,2:27:17.21:0,17,590	0/0:28,0:28:69.42:0,69,776	0/0:14,0:14:42.09:0,42,440
chr10	22065122	.	GCACA	G	2437.98	PASS	AB=0.740;AC=32;AF=0.615;AN=52;BaseQRankSum=-2.146;DP=702;FS=14.352;HRun=0;HaplotypeScore=156.9869;InbreedingCoeff=0.0761;MQ=52.05;MQ0=21;MQRankSum=-1.738;QD=4.22;ReadPosRankSum=4.286;VQSLOD=1.3286;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:29,12:41:8.94:141,9,0	1/1:4,5:9:12.02:152,12,0	./.	./.	0/0:14,0:22:3.48:0,3,46	0/1:14,0:28:18.15:18,0,52	0/0:20,0:18:19.24:0,19,196	0/1:33,1:32:9.01:90,0,9	1/1:11,7:21:16.61:239,17,0	0/1:16,0:24:32.33:40,0,32	0/0:13,0:17:2.78:0,3,32	1/1:11,0:25:6.01:57,6,0	0/0:19,0:20:5.25:0,5,198	0/1:8,0:30:46.15:46,0,77	0/1:22,0:36:23.18:61,0,23	1/1:17,15:32:20.73:279,21,0	1/1:18,9:25:19.90:246,20,0	1/1:11,7:17:9.20:193,9,0	1/1:16,4:19:2.36:156,2,0	1/1:10,11:21:18.53:283,19,0	1/1:37,19:54:15.05:235,15,0	0/1:14,0:24:1.01:23,0,1	0/1:7,0:12:15.98:16,0,63	0/1:32,0:31:3.08:3,0,365	0/1:12,0:25:24.16:24,0,44	0/1:17,0:29:99:169,0,178	1/1:14,0:22:12.86:126,13,0	0/0:7,0:4:3.01:0,3,41
chr10	22065134	.	A	ATG	1073.43	PASS	AB=0.885;AC=9;AF=0.161;AN=56;BaseQRankSum=2.303;DP=688;FS=37.684;HRun=0;HaplotypeScore=146.2384;InbreedingCoeff=-0.2064;MQ=51.00;MQ0=19;MQRankSum=1.258;QD=4.79;ReadPosRankSum=-0.340;VQSLOD=1.6088;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:48:53.98:0,54,722	0/0:9,0:9:17.62:0,18,198	0/0:11,0:3:6.02:0,6,74	0/0:19,0:7:15.04:0,15,182	0/0:19,1:20:26.77:0,27,399	0/0:23,0:23:12.23:0,12,299	0/1:11,12:21:99:315,0,194	0/0:28,0:25:37.65:0,38,964	0/0:19,0:19:39.02:0,39,462	0/1:20,0:19:99:154,0,482	0/0:14,0:14:5.14:0,5,209	0/0:24,0:24:23.89:0,24,308	0/1:15,8:24:99:133,0,492	0/1:26,1:26:31.89:32,0,79	0/0:34,2:34:16.61:0,17,485	0/0:32,0:32:62.95:0,63,812	0/0:26,0:23:50.75:0,51,569	0/0:20,0:19:44.49:0,44,475	0/0:20,0:19:48.32:0,48,575	0/0:30,0:27:44.99:0,45,538	0/0:57,1:56:77.99:0,78,1051	0/0:19,0:20:18.01:0,18,228	0/1:13,0:12:16.24:16,0,190	0/1:19,16:36:99:454,0,399	0/1:27,0:26:19.31:19,0,254	0/1:29,2:31:80.98:81,0,811	0/1:22,0:22:3.32:3,0,435	0/0:6,0:2:2.62:0,3,44
chr10	22065523	.	C	CA	4717.58	PASS	AB=0.947;AC=19;AF=0.339;AN=56;BaseQRankSum=-13.457;DP=678;FS=2.926;HRun=9;HaplotypeScore=62.7983;InbreedingCoeff=0.9231;MQ=75.20;MQ0=0;MQRankSum=0.040;QD=23.95;ReadPosRankSum=-1.871;VQSLOD=5.1143;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,114,990	1/1:0,13:13:36.10:398,36,0	0/1:17,1:18:10.79:11,0,190	0/0:13,0:12:14.08:0,14,227	0/0:35,0:35:80.95:0,81,702	0/0:24,1:25:40.09:0,40,567	0/0:24,0:24:68.98:0,69,599	1/1:5,24:29:66.18:730,66,0	1/1:1,15:16:33.09:365,33,0	0/0:25,0:25:62.98:0,63,547	0/0:16,0:16:38.99:0,39,338	0/0:23,0:23:62.99:0,63,547	0/0:33,0:33:95.98:0,96,833	0/0:27,0:27:65.94:0,66,565	0/0:33,0:32:68.53:0,69,756	1/1:3,17:22:27.75:500,28,0	1/1:1,23:24:66.18:730,66,0	1/1:1,17:17:42.11:465,42,0	1/1:3,10:13:36.07:386,36,0	1/1:4,20:24:57.11:617,57,0	1/1:1,19:20:36.38:516,36,0	0/0:29,0:29:65.97:0,66,573	0/0:22,0:22:50.98:0,51,442	0/0:27,1:28:47.80:0,48,644	0/0:25,0:25:65.98:0,66,573	0/0:26,1:27:29.79:0,30,487	0/0:36,0:36:99:0,105,912	0/0:19,0:19:50.98:0,51,442
chr10	22066375	.	CA	C	840.23	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.984;DP=649;FS=2.368;HRun=6;HaplotypeScore=61.3994;InbreedingCoeff=0.9958;MQ=80.90;MQ0=0;MQRankSum=-0.268;QD=26.26;ReadPosRankSum=1.192;VQSLOD=3.9625;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,120,1547	0/0:8,0:8:24.08:0,24,312	0/0:19,0:19:41.99:0,42,485	0/0:15,0:15:25.52:0,26,304	0/0:43,0:43:99:0,123,1603	0/0:26,0:26:72.23:0,72,934	0/0:19,0:19:45.15:0,45,592	0/0:30,0:30:90.29:0,90,1184	0/0:20,0:20:60.19:0,60,776	0/0:19,0:19:51.14:0,51,635	0/0:26,0:26:66.20:0,66,851	0/0:11,0:11:30.10:0,30,395	0/0:29,0:29:81.26:0,81,1065	0/0:26,0:26:72.22:0,72,931	1/1:2,30:32:87.22:935,87,0	0/0:31,0:31:81.24:0,81,1039	0/0:15,0:15:45.15:0,45,592	0/0:26,0:26:69.22:0,69,908	0/0:26,0:26:69.21:0,69,894	0/0:26,0:26:69.22:0,69,908	0/0:19,0:19:54.18:0,54,710	0/0:22,0:22:63.19:0,63,807	0/0:21,0:21:60.17:0,60,773	0/0:13,0:12:39.13:0,39,513	0/0:20,0:20:45.15:0,45,592	0/0:20,0:20:57.17:0,57,735	0/0:30,0:30:84.24:0,84,1073	0/0:13,0:13:36.12:0,36,474
chr10	22067005	.	A	AACCCAGT	36762.03	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-8.776;DP=403;FS=1.290;HRun=0;HaplotypeScore=71.4250;InbreedingCoeff=0.9712;MQ=67.48;MQ0=0;MQRankSum=-10.710;QD=103.26;ReadPosRankSum=5.279;VQSLOD=5.9645;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,25:36:78.27:3177,78,0	1/1:3,0:3:9.03:199,9,0	0/0:8,0:8:23.83:0,24,336	0/0:12,0:12:36.08:0,36,858	0/0:16,0:16:48.16:0,48,1324	1/1:2,11:14:36.12:1505,36,0	1/1:2,17:20:54.19:2258,54,0	1/1:7,10:22:60.18:2143,60,0	1/1:3,8:14:33.11:1378,33,0	1/1:1,15:16:48.16:2007,48,0	1/1:1,12:14:39.13:1571,39,0	1/1:1,24:25:75.26:3137,75,0	1/1:0,12:13:35.76:1505,36,0	1/1:0,17:18:54.19:2254,54,0	1/1:0,15:17:45.15:1882,45,0	1/1:2,8:13:30.10:1234,30,0	1/1:3,5:11:21.07:815,21,0	1/1:1,7:9:24.08:943,24,0	1/1:2,9:11:33.11:1224,33,0	1/1:1,11:12:36.12:1483,36,0	1/1:4,4:9:18.06:729,18,0	0/0:11,0:11:33.11:0,33,886	1/1:1,8:11:21.07:850,21,0	1/1:3,5:9:15.05:553,15,0	1/1:2,11:13:39.13:1614,39,0	1/1:3,15:21:63.22:2420,63,0	1/1:2,8:12:27.09:1127,27,0	1/1:1,6:10:18.06:754,18,0
chr10	22067175	.	CTATT	C	1239.76	PASS	AC=36;AF=1.000;AN=36;DP=243;FS=0.000;HRun=0;HaplotypeScore=48.9614;InbreedingCoeff=-0.1392;MQ=53.75;MQ0=4;QD=6.33;VQSLOD=1.0692;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	1/1:1,2:3:6.02:92,6,0	./.	./.	./.	1/1:5,0:9:6.01:56,6,0	./.	1/1:32,0:31:2.97:20,3,0	1/1:4,1:5:3.01:46,3,0	1/1:2,0:5:6.01:56,6,0	1/1:9,0:11:3:28,3,0	1/1:8,0:9:3:28,3,0	1/1:3,0:4:3:28,3,0	./.	1/1:7,0:10:6.01:56,6,0	1/1:5,0:5:3.01:46,3,0	1/1:12,9:23:24.07:333,24,0	1/1:10,14:23:15.05:230,15,0	1/1:6,2:6:6.02:92,6,0	1/1:6,2:8:6.02:92,6,0	./.	1/1:4,0:5:3:28,3,0	./.	./.	1/1:10,0:13:3:28,3,0	1/1:9,0:12:3:28,3,0	1/1:8,0:10:3:28,3,0	./.
chr10	22067874	.	CCACACACACA	C	1670.81	PASS	AB=0.827;AC=18;AF=0.333;AN=54;BaseQRankSum=-1.186;DP=641;FS=23.166;HRun=0;HaplotypeScore=242.4622;InbreedingCoeff=-0.0324;MQ=63.52;MQ0=9;MQRankSum=-2.197;QD=4.59;ReadPosRankSum=-2.833;VQSLOD=1.0237;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:28:22.37:0,22,245	1/1:6,0:8:3.01:39,3,0	./.	0/0:31,0:25:6.46:0,6,48	0/0:19,0:19:30.05:0,30,710	0/1:19,3:23:34.53:37,0,35	0/1:25,0:25:11.55:99,0,12	0/1:12,0:12:11.06:11,0,83	0/1:9,0:10:22.15:22,0,73	0/1:17,4:20:41.21:103,0,41	0/0:6,6:12:2.99:0,3,23	0/1:23,16:41:65.22:188,0,65	1/1:30,3:34:9.81:475,10,0	0/1:17,15:36:12.11:246,0,12	0/0:29,0:35:62.73:0,63,775	0/1:19,0:31:99:113,0,273	0/1:23,0:22:26.82:27,0,108	0/1:14,0:20:38.55:39,0,128	0/0:16,0:14:5.96:0,6,47	0/0:9,0:12:8.98:0,9,72	0/0:22,0:22:14.48:0,14,148	0/0:16,0:17:36.08:0,36,864	0/1:12,2:14:27.71:29,0,28	1/1:43,1:46:10.60:404,11,0	0/1:7,10:16:0:0,0,0	0/0:11,0:25:51.08:0,51,932	0/0:17,0:25:44.57:0,45,527	0/0:2,0:7:15.05:0,15,331
chr10	22067926	.	ACG	A	412.30	PASS	AB=0.989;AC=13;AF=0.232;AN=56;BaseQRankSum=12.023;DP=874;FS=76.970;HRun=0;HaplotypeScore=214.5048;InbreedingCoeff=-0.0068;MQ=49.72;MQ0=24;MQRankSum=-2.966;QD=1.13;ReadPosRankSum=-0.482;VQSLOD=-0.4596;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:39:51.17:0,51,1166	1/1:13,0:12:1.09:4,1,0	0/0:23,0:4:12.04:0,12,230	0/0:31,0:7:21.02:0,21,297	0/0:22,1:23:30.18:0,30,928	0/0:31,0:31:4.96:0,5,883	0/0:38,0:36:68.12:0,68,1375	0/1:35,0:31:80.45:80,0,518	1/1:31,1:31:9.03:75,9,0	0/0:30,0:26:61.49:0,61,967	0/0:14,0:14:24.07:0,24,459	0/0:44,0:43:46.43:0,46,1096	0/1:35,0:35:49.29:49,0,1019	0/0:60,0:59:68.74:0,69,1376	0/1:41,0:40:1.12:1,0,1009	0/1:31,1:33:33.64:34,0,41	0/1:42,0:42:41.25:41,0,72	0/1:20,1:21:92.83:116,0,93	0/1:19,0:16:15.35:15,0,267	0/0:26,0:25:2.18:0,2,53	0/1:37,0:34:32.24:119,0,32	0/0:25,0:25:48.45:0,48,949	0/0:23,0:22:27.86:0,28,904	0/1:57,0:56:23.07:23,0,1244	0/0:37,0:37:65.88:0,66,1017	0/0:36,0:36:38.86:0,39,1234	0/0:21,0:19:12.90:0,13,638	0/0:7,0:6:18.04:0,18,217
chr10	22067927	.	CGCACACAT	C	2896.82	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=9.101;DP=870;FS=28.074;HRun=0;HaplotypeScore=272.9657;InbreedingCoeff=0.8592;MQ=49.75;MQ0=24;MQRankSum=-6.811;QD=11.54;ReadPosRankSum=-0.611;VQSLOD=1.3638;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:39:69.15:0,69,1975	1/1:5,8:12:2.22:77,2,0	0/0:25,0:5:15.05:0,15,375	0/0:31,0:7:21.04:0,21,464	0/0:23,0:23:45.15:0,45,1239	0/0:33,0:33:60.20:0,60,1501	0/0:38,0:36:86.33:0,86,2206	1/1:19,15:30:44.92:712,45,0	1/1:8,23:30:14.84:266,15,0	0/0:30,0:26:31.59:0,32,1299	0/0:15,0:15:27.09:0,27,747	0/0:45,0:44:33.66:0,34,1701	0/0:37,0:37:51.59:0,52,1775	0/0:59,0:58:5.40:0,5,2169	0/0:41,0:40:75.20:0,75,1908	1/1:16,15:31:14.73:322,15,0	1/1:13,28:41:2.23:278,2,0	1/1:16,4:20:7.17:560,7,0	1/1:9,9:15:23.83:269,24,0	1/1:9,16:24:3.35:14,3,0	1/1:37,1:35:22.93:589,23,0	0/0:24,0:24:51.17:0,51,1303	0/0:23,0:22:51.18:0,51,1415	0/0:56,0:55:80.98:0,81,2039	0/0:36,0:36:61.71:0,62,1634	0/0:35,0:35:75.04:0,75,2058	0/0:20,0:18:48.14:0,48,1229	0/0:7,0:6:9.03:0,9,330
chr10	22067934	.	ATG	A	36.24	PASS	AB=0.994;AC=8;AF=0.143;AN=56;BaseQRankSum=10.142;DP=890;FS=46.343;HRun=0;HaplotypeScore=218.1647;InbreedingCoeff=0.2457;MQ=50.07;MQ0=23;MQRankSum=-4.822;QD=0.21;ReadPosRankSum=-0.492;VQSLOD=1.3148;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:35:75.35:0,75,1558	1/1:13,0:12:2.31:10,2,0	0/0:30,2:9:24.03:0,24,405	0/0:37,0:10:30.08:0,30,536	0/0:19,1:20:51.17:0,51,1023	0/0:31,1:32:41.30:0,41,1253	0/0:44,0:42:99:0,114,2204	0/0:29,0:26:3.32:0,3,511	1/1:29,0:28:6.10:47,6,0	0/0:30,0:26:69.24:0,69,1341	0/0:17,0:17:33.10:0,33,669	0/0:46,2:47:95.89:0,96,1776	0/0:42,1:43:68.20:0,68,1932	0/0:64,0:63:99:0,118,2222	0/0:44,0:43:99:0,102,1908	0/1:28,0:28:25.71:26,0,99	0/1:39,1:40:18.24:18,0,148	0/1:21,0:21:40.75:41,0,204	0/0:18,0:15:16.11:0,16,393	0/0:22,1:22:5.18:0,5,70	0/1:44,0:41:22.31:22,0,68	0/0:23,0:23:66.21:0,66,1259	0/0:22,0:21:30.54:0,31,1012	0/0:53,2:54:61.53:0,62,1843	0/0:36,0:36:69.24:0,69,1391	0/0:32,1:33:63.98:0,64,1831	0/0:22,0:20:33.20:0,33,989	0/0:7,0:6:15.05:0,15,304
chr10	22067936	.	GCACA	G	302.58	PASS	AB=0.986;AC=8;AF=0.143;AN=56;BaseQRankSum=9.824;DP=902;FS=1.319;HRun=0;HaplotypeScore=240.2746;InbreedingCoeff=0.0872;MQ=50.12;MQ0=24;MQRankSum=-4.083;QD=1.47;ReadPosRankSum=2.043;VQSLOD=2.4753;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:37:77.85:0,78,2165	1/1:11,1:11:2.60:27,3,0	0/0:32,0:9:27.09:0,27,669	0/0:41,0:10:30.10:0,30,788	0/0:20,0:20:54.19:0,54,1392	0/0:31,0:31:64.56:0,65,1733	0/0:44,0:42:99:0,114,3043	0/1:27,0:24:29.69:30,0,532	0/1:29,0:28:4.88:33,0,5	0/0:29,0:25:69.23:0,69,1773	0/0:16,0:16:33.11:0,33,899	0/0:48,0:47:99:0,99,2497	0/0:43,0:43:99:0,114,2758	0/0:62,0:61:99:0,120,3048	0/0:46,0:45:99:0,105,2702	0/1:26,1:27:88.81:89,0,159	0/1:37,2:39:57.12:109,0,57	0/1:21,0:21:86.59:87,0,283	0/0:22,0:19:20.49:0,20,668	0/0:23,0:22:6.59:0,7,146	0/1:49,0:48:60.69:61,0,511	0/0:24,0:24:69.24:0,69,1725	0/0:22,0:21:54.19:0,54,1450	0/0:56,0:55:99:0,104,2627	0/0:36,0:36:67.73:0,68,1859	0/0:33,0:33:78.58:0,79,2453	0/0:22,0:20:57.17:0,57,1435	0/0:7,0:6:15.05:0,15,345
chr10	22068059	.	TAC	T	6718.38	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-9.929;DP=959;FS=3.444;HRun=0;HaplotypeScore=175.9245;InbreedingCoeff=0.9935;MQ=57.30;MQ0=15;MQRankSum=-1.815;QD=19.31;ReadPosRankSum=3.365;VQSLOD=5.3072;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:37:48:0,48,424	1/1:0,15:15:33.54:391,34,0	0/0:41,0:17:24.06:0,24,329	0/0:41,0:24:58.01:0,58,813	0/0:22,0:22:53.97:0,54,760	0/0:7,0:35:51:0,51,449	0/0:14,0:37:45.47:0,45,398	1/1:15,24:39:69.06:745,69,0	1/1:6,26:32:36.11:443,36,0	0/0:11,0:41:86.04:0,86,640	0/0:7,0:23:31.51:0,32,218	0/0:6,0:40:57.46:0,57,500	0/0:11,0:47:35.44:0,35,299	0/0:4,0:44:47.04:0,47,402	1/1:5,43:48:81.08:969,81,0	1/1:4,25:29:42.13:517,42,0	1/1:5,31:35:57.16:701,57,0	1/1:4,37:40:81.25:997,81,0	1/1:8,12:17:18.37:380,18,0	1/1:3,16:19:33.08:390,33,0	1/1:19,49:67:70.32:1185,70,0	0/0:26,0:26:49.58:0,50,1176	0/0:8,0:30:40.97:0,41,350	0/0:13,0:43:48.68:0,49,513	0/0:5,0:26:62.99:0,63,555	0/0:21,0:37:70.33:0,70,655	0/0:21,0:27:25.33:0,25,249	0/0:3,0:8:11.98:0,12,101
chr10	22068154	.	GA	G	1221.63	PASS	AB=0.766;AC=6;AF=0.107;AN=56;BaseQRankSum=9.054;DP=642;FS=3.361;HRun=8;HaplotypeScore=72.9844;InbreedingCoeff=0.7416;MQ=74.00;MQ0=0;MQRankSum=1.298;QD=16.29;ReadPosRankSum=-0.098;VQSLOD=3.7915;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:63.19:0,63,761	0/0:12,0:12:27.08:0,27,326	0/1:17,0:17:1.58:2,0,234	0/0:15,0:12:10.03:0,10,48	0/0:35,0:35:99:0,99,1183	0/0:24,0:24:63.19:0,63,761	0/0:16,0:16:48.11:0,48,564	0/0:23,0:23:60.16:0,60,695	0/0:22,0:22:57.17:0,57,688	0/0:26,0:26:75.23:0,75,904	0/0:21,0:21:60.16:0,60,703	0/0:28,0:28:78.24:0,78,940	0/0:29,0:29:78.22:0,78,922	0/0:23,0:23:54.17:0,54,652	0/0:31,0:32:87.13:0,87,1029	0/0:23,0:23:57.16:0,57,677	0/0:29,0:29:69.20:0,69,822	0/0:22,0:22:57.17:0,57,689	0/0:27,0:28:63:0,63,711	0/0:28,0:28:72.22:0,72,869	0/0:19,0:19:45.14:0,45,543	0/0:24,0:24:63.19:0,63,761	0/0:19,1:20:22.18:0,22,551	0/0:19,0:19:54.17:0,54,652	0/0:24,0:24:66.20:0,66,797	0/1:3,22:25:3.53:539,0,4	1/1:2,22:24:57.09:550,57,0	1/1:0,9:9:27.04:261,27,0
chr10	22068550	.	GTC	G	976.11	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.607;DP=787;FS=7.948;HRun=0;HaplotypeScore=90.2750;InbreedingCoeff=0.9835;MQ=82.43;MQ0=0;MQRankSum=-1.081;QD=30.50;ReadPosRankSum=-0.040;VQSLOD=5.1650;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,135,2268	0/0:7,0:7:15.05:0,15,266	0/0:23,0:23:63.16:0,63,1011	0/0:20,0:20:54.17:0,54,923	0/0:32,0:32:93.24:0,93,1504	0/0:22,0:22:63.22:0,63,1117	0/0:27,0:27:75.24:0,75,1288	0/0:32,0:32:84.27:0,84,1415	0/0:18,0:18:48.15:0,48,823	0/0:25,0:25:72.24:0,72,1251	0/0:21,0:21:63.22:0,63,1107	0/0:26,0:26:75.24:0,75,1281	0/0:46,0:46:99:0,132,2272	0/0:38,0:38:99:0,105,1828	1/1:1,31:32:78.23:1071,78,0	0/0:43,0:43:99:0,129,2283	0/0:35,0:35:96.30:0,96,1671	0/0:21,0:21:63.11:0,63,1027	0/0:34,0:34:96.31:0,96,1626	0/0:30,0:30:87.27:0,87,1485	0/0:33,0:33:96.29:0,96,1635	0/0:26,0:26:72.25:0,72,1277	0/0:22,0:22:60.19:0,60,1036	0/0:36,0:36:99:0,102,1775	0/0:23,0:23:66.23:0,66,1163	0/0:23,0:23:69.23:0,69,1168	0/0:31,0:30:90.29:0,90,1564	0/0:13,0:13:27.09:0,27,478
chr10	22068871	.	A	AC	2290.24	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-8.837;DP=661;FS=12.037;HRun=8;HaplotypeScore=68.5980;InbreedingCoeff=0.9241;MQ=84.52;MQ0=0;MQRankSum=-1.051;QD=23.13;ReadPosRankSum=2.396;VQSLOD=3.7675;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,14:23:2.25:314,2,0	0/0:7,0:7:15:0,15,137	0/0:21,0:22:18.33:0,18,392	0/0:27,0:27:58.42:0,58,513	1/1:2,19:21:45.09:505,45,0	0/0:39,0:39:99:0,111,1003	0/0:17,0:17:38.99:0,39,351	0/0:27,0:27:62.96:0,63,563	0/0:20,0:20:48:0,48,435	0/0:22,0:22:60.02:0,60,548	0/0:27,0:27:78.03:0,78,708	0/0:32,0:32:90.04:0,90,823	0/0:24,0:24:60.01:0,60,544	0/0:21,0:21:54.03:0,54,493	1/1:0,28:28:75.22:866,75,0	0/0:26,0:26:72.01:0,72,654	0/0:27,0:27:72:0,72,652	0/0:19,0:19:56.99:0,57,510	0/0:20,0:20:54.02:0,54,491	0/0:29,0:29:72.01:0,72,657	0/0:16,0:16:39.02:0,39,357	1/1:11,16:27:44.82:757,45,0	0/0:14,0:14:10.17:0,10,246	0/0:26,0:26:74.98:0,75,670	0/0:23,0:24:62.07:0,62,554	0/0:28,0:28:78.03:0,78,710	0/0:33,0:33:87.01:0,87,788	0/0:14,0:14:30.01:0,30,275
chr10	22069421	.	T	TAA	9289.79	PASS	AB=0.585;AC=47;AF=0.839;AN=56;BaseQRankSum=-3.222;DP=544;FS=2.066;HRun=10;HaplotypeScore=69.6359;InbreedingCoeff=0.8876;MQ=75.53;MQ0=0;MQRankSum=-2.389;QD=19.15;ReadPosRankSum=1.549;VQSLOD=3.8019;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,32:37:70.70:965,71,0	1/1:2,0:10:16.69:57,17,0	0/0:9,0:9:11.70:0,12,90	0/0:16,0:16:12.11:0,12,158	0/0:16,0:18:44.50:0,45,408	1/1:6,27:34:62.63:876,63,0	1/1:4,14:22:43.60:547,44,0	1/1:9,1:28:10.05:155,10,0	1/1:2,0:17:24.95:88,25,0	1/1:5,13:20:44.61:598,45,0	1/1:3,11:15:39.11:545,39,0	1/1:2,16:19:41.63:590,42,0	1/1:2,12:16:27.08:385,27,0	1/1:0,14:14:24.08:358,24,0	1/1:3,12:16:24.04:333,24,0	0/1:7,0:24:0.06:66,0,0	1/1:2,0:24:45.80:160,46,0	1/1:2,0:18:34.93:123,35,0	1/1:4,0:27:58.08:220,58,0	1/1:2,0:24:38.76:166,39,0	1/1:2,0:14:22.46:79,22,0	0/0:16,0:16:36.05:0,36,366	1/1:2,13:16:39.13:565,39,0	1/1:1,14:16:33.11:476,33,0	1/1:2,15:19:32.60:450,33,0	1/1:8,15:26:53.61:686,54,0	1/1:3,19:24:35.57:624,36,0	1/1:0,5:5:12.04:179,12,0
chr10	22069706	.	CGGTGATAAAATA	C	1889.87	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.596;DP=706;FS=21.515;HRun=0;HaplotypeScore=275.5718;InbreedingCoeff=0.9996;MQ=77.65;MQ0=0;MQRankSum=-7.074;QD=59.06;ReadPosRankSum=-1.004;VQSLOD=2.0755;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,24:31:54.16:1985,54,0	0/0:11,0:11:33.11:0,33,1703	0/0:21,0:21:60.19:0,60,2466	0/0:19,0:19:54.14:0,54,1786	0/0:29,0:29:87.30:0,87,5003	0/0:31,0:31:90.31:0,90,5210	0/0:22,0:22:63.16:0,63,3188	0/0:34,0:34:99:0,102,5231	0/0:32,0:32:90.30:0,90,4872	0/0:25,0:25:75.26:0,75,4487	0/0:16,0:16:48.16:0,48,2777	0/0:27,0:27:78.27:0,78,4591	0/0:27,0:27:78.25:0,78,4460	0/0:24,0:24:72.25:0,72,4107	0/0:40,0:40:99:0,117,6850	0/0:32,0:32:96.33:0,96,5078	0/0:35,0:35:99:0,105,5192	0/0:14,0:14:39.13:0,39,2143	0/0:22,0:22:60.21:0,60,3068	0/0:25,0:25:75.26:0,75,4085	0/0:36,0:36:99:0,108,5290	0/0:21,0:21:63.22:0,63,3897	0/0:17,0:17:48.16:0,48,2760	0/0:33,0:33:99:0,99,5721	0/0:17,0:17:51.18:0,51,2847	0/0:28,0:28:81.28:0,81,4710	0/0:22,0:22:63.20:0,63,3186	0/0:14,0:14:39.13:0,39,2415
chr10	22069800	.	G	GA	1108.56	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-5.755;DP=755;FS=2.536;HRun=10;HaplotypeScore=94.6953;InbreedingCoeff=0.9109;MQ=71.72;MQ0=2;MQRankSum=1.155;QD=15.40;ReadPosRankSum=-1.518;VQSLOD=3.6355;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:35:42.69:0,43,128	0/0:12,0:12:32.96:0,33,271	0/0:32,0:22:7.97:0,8,193	0/0:34,0:24:23.35:0,23,163	0/0:3,0:30:47.75:0,48,137	0/0:23,0:23:56.89:0,57,468	0/0:16,1:17:3.93:0,4,238	0/0:30,0:30:65.21:0,65,518	0/0:21,0:21:56.93:0,57,467	0/0:30,0:31:85.72:0,86,678	0/0:16,0:16:38.94:0,39,320	0/0:31,0:31:86.88:0,87,710	0/0:30,1:31:51.92:0,52,633	0/0:36,0:36:70.86:0,71,691	0/0:45,0:45:99:0,122,987	0/0:29,0:30:79.93:0,80,646	0/0:38,1:40:63.82:0,64,726	0/0:20,0:20:53.93:0,54,443	0/0:15,0:15:21.15:0,21,210	0/0:32,2:34:48.84:0,49,606	0/0:19,0:19:44.93:0,45,369	0/0:3,0:25:41.47:0,41,136	0/0:23,0:23:62.90:0,63,512	0/0:25,0:26:24.51:0,25,370	0/0:21,3:24:24.92:0,25,409	1/1:11,22:33:42.75:641,43,0	1/1:5,22:30:48.67:479,49,0	1/1:1,8:9:12.03:128,12,0
chr10	22070775	.	GTC	G	7009.90	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=3.498;DP=716;FS=15.879;HRun=0;HaplotypeScore=96.2253;InbreedingCoeff=0.9908;MQ=87.18;MQ0=1;MQRankSum=-7.807;QD=32.30;ReadPosRankSum=1.499;VQSLOD=5.7570;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:60.21:0,60,1064	1/1:0,6:6:9.03:124,9,0	0/0:25,0:25:69.07:0,69,1144	0/0:26,0:26:72.21:0,72,1211	0/0:31,0:31:90.31:0,90,1586	0/0:23,0:23:66.16:0,66,1108	0/0:15,0:15:45.15:0,45,793	1/1:3,25:28:75.24:1014,75,0	1/1:2,34:36:90.30:1237,90,0	0/0:27,0:27:81.28:0,81,1426	0/0:25,0:25:75.26:0,75,1328	0/0:35,0:35:99:0,105,1855	0/0:29,0:29:87.30:0,87,1538	0/0:36,0:36:96.31:0,96,1673	0/0:58,0:58:99:0,169,2981	1/1:1,29:29:66.22:907,66,0	1/1:3,24:27:60.20:825,60,0	1/1:1,18:19:48.16:660,48,0	1/1:6,13:19:39.13:534,39,0	1/1:1,17:18:45.15:618,45,0	1/1:3,31:34:81.23:1091,81,0	0/0:17,0:17:51.17:0,51,899	0/0:15,0:15:45.15:0,45,797	0/0:24,0:24:69.24:0,69,1225	0/0:23,0:23:69.24:0,69,1222	0/0:23,0:23:69.23:0,69,1199	0/0:31,0:30:87.30:0,87,1543	0/0:12,0:12:36.12:0,36,639
chr10	22073765	.	C	CGT	8389.95	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-4.404;DP=691;FS=4.654;HRun=0;HaplotypeScore=142.3246;InbreedingCoeff=0.9937;MQ=67.50;MQ0=7;MQRankSum=-3.876;QD=36.48;ReadPosRankSum=1.637;VQSLOD=6.5432;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:33.10:0,33,417	1/1:14,2:16:33.11:546,33,0	0/0:24,0:15:30.10:0,30,380	0/0:26,0:21:45.39:0,45,576	0/0:31,0:30:69.21:0,69,872	0/0:23,0:23:48.16:0,48,619	0/0:23,0:23:42.14:0,42,539	1/1:8,25:33:84.15:1265,84,0	1/1:22,2:24:63.20:997,63,0	0/0:31,0:31:72.22:0,72,912	0/0:26,0:26:60.18:0,60,751	0/0:14,0:14:18.06:0,18,232	0/0:35,0:34:81.20:0,81,985	0/0:25,0:25:57.18:0,57,732	0/0:25,0:25:51.17:0,51,656	1/1:27,5:32:77.93:1200,78,0	1/1:24,6:29:72.24:1150,72,0	1/1:16,4:20:51.16:810,51,0	1/1:22,2:23:42.12:659,42,0	1/1:18,4:20:51.16:808,51,0	1/1:23,6:28:57.19:955,57,0	0/0:21,0:21:60.19:0,60,765	0/0:27,0:27:57.17:0,57,724	0/0:28,0:27:42.18:0,42,681	0/0:26,0:25:48.13:0,48,590	0/0:19,0:18:45.07:0,45,553	0/0:34,0:34:54.03:0,54,948	0/0:4,0:4:12.04:0,12,153
chr10	22073774	.	GTA	G	575.11	PASS	AB=0.910;AC=10;AF=0.179;AN=56;BaseQRankSum=10.681;DP=745;FS=12.441;HRun=0;HaplotypeScore=176.1875;InbreedingCoeff=-0.0304;MQ=61.98;MQ0=18;MQRankSum=0.033;QD=2.40;ReadPosRankSum=4.780;VQSLOD=1.6679;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:20:35.70:0,36,568	0/1:13,2:15:3.64:4,0,40	0/0:31,0:12:30.10:0,30,552	0/0:40,0:21:34.93:0,35,851	0/0:31,0:30:78.16:0,78,1121	0/0:24,0:24:53.11:0,53,715	0/0:26,0:26:45.11:0,45,669	0/1:40,0:40:41.28:41,0,347	0/1:22,3:25:29.33:107,0,29	0/0:33,0:33:51.46:0,51,1171	0/0:22,0:22:60.17:0,60,937	0/0:12,0:12:18.06:0,18,230	0/0:40,0:39:90.07:0,90,1136	0/0:27,0:27:61.01:0,61,824	0/0:28,0:29:65.83:0,66,946	0/1:27,3:30:45.28:45,0,52	1/1:27,3:29:3.54:154,4,0	0/1:20,3:23:73.59:74,0,146	0/1:17,4:18:34.03:81,0,34	0/1:23,1:22:21.83:85,0,22	0/1:29,3:31:26.76:124,0,27	0/0:22,0:22:60.20:0,60,903	0/0:29,0:29:63.18:0,63,918	0/0:29,0:28:66.19:0,66,909	0/0:28,0:27:54.89:0,55,786	0/0:21,0:19:8.19:0,8,759	0/0:35,0:35:44.03:0,44,1361	0/0:5,0:4:12.04:0,12,204
chr10	22073780	.	TTG	T	9691.36	PASS	AB=0.855;AC=44;AF=0.786;AN=56;BaseQRankSum=-2.756;DP=748;FS=2.351;HRun=0;HaplotypeScore=143.2496;InbreedingCoeff=0.5272;MQ=55.26;MQ0=26;MQRankSum=4.028;QD=15.51;ReadPosRankSum=3.736;VQSLOD=5.1109;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:21:12.89:63,0,13	0/1:13,3:16:0.88:199,0,1	0/0:39,0:12:6.43:0,6,44	0/0:43,0:16:21.03:0,21,259	1/1:7,21:29:42.74:480,43,0	1/1:8,17:25:38.06:409,38,0	1/1:5,17:24:26.91:300,27,0	1/1:21,15:36:24.28:523,24,0	1/1:19,5:24:44.90:534,45,0	1/1:9,22:31:64.42:719,64,0	1/1:9,12:20:9.25:230,9,0	1/1:0,12:13:17.89:193,18,0	1/1:6,27:35:65.69:719,66,0	1/1:5,20:27:47.61:525,48,0	1/1:8,20:29:43.33:512,43,0	1/1:23,5:28:57.74:669,58,0	1/1:27,4:30:36.18:432,36,0	1/1:20,4:23:17.83:383,18,0	1/1:20,2:19:15.89:292,16,0	1/1:20,4:22:44.57:480,45,0	1/1:29,2:31:25.12:360,25,0	1/1:2,17:22:32.60:328,33,0	1/1:7,20:27:32.94:393,33,0	1/1:6,28:33:57.09:658,57,0	0/1:10,15:24:17.69:280,0,18	0/1:20,1:19:11.15:11,0,173	0/0:35,0:35:16.06:0,16,183	0/0:4,0:3:1.82:0,2,5
chr10	22074890	.	T	TTTTTG	948.90	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=1.702;DP=668;FS=45.171;HRun=0;HaplotypeScore=140.7649;InbreedingCoeff=-0.0081;MQ=68.82;MQ0=9;MQRankSum=2.193;QD=4.14;ReadPosRankSum=5.730;VQSLOD=0.5052;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:3,24:31:30.19:772,30,0	0/0:11,0:11:5.43:0,5,127	0/0:56,0:17:32.28:0,32,244	0/0:45,0:26:8.15:0,8,154	0/0:31,0:31:19.78:0,20,350	0/0:21,0:21:24.91:0,25,272	0/0:21,0:21:32.25:0,32,336	0/1:32,0:32:3.99:4,0,177	0/1:15,0:14:64.89:65,0,75	0/0:28,0:28:53.86:0,54,405	0/0:12,0:12:14.59:0,15,167	0/0:20,0:20:38.39:0,38,245	0/0:18,0:18:26.12:0,26,192	0/0:22,0:22:24.77:0,25,191	0/1:31,0:30:24.13:24,0,317	0/1:28,0:28:80.59:81,0,165	0/1:31,0:31:87.66:88,0,264	0/1:11,0:11:2.92:3,0,51	0/0:45,0:44:9.59:0,10,450	0/1:21,0:21:44.41:44,0,101	0/0:11,0:11:11.59:0,12,80	0/0:22,0:22:13.02:0,13,251	0/1:14,0:14:2.44:2,0,39	0/0:21,0:21:36.30:0,36,307	0/1:14,0:14:6:6,0,66	0/0:24,0:24:58.56:0,59,694	0/0:23,0:23:39.51:0,40,568	0/0:8,0:8:3.01:0,3,41
chr10	22074893	.	TTTTTTTG	T	432.31	PASS	AB=0.960;AC=4;AF=0.071;AN=56;BaseQRankSum=6.231;DP=647;FS=13.012;HRun=0;HaplotypeScore=153.3696;InbreedingCoeff=0.3101;MQ=70.13;MQ0=8;MQRankSum=-0.313;QD=8.01;ReadPosRankSum=3.936;VQSLOD=1.9116;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:27:39.06:0,39,1171	0/0:11,0:11:33.11:0,33,761	0/0:51,0:17:35.15:0,35,536	0/0:40,0:26:21.10:0,21,327	0/0:30,0:30:84.21:0,84,2057	0/0:22,0:22:57.15:0,57,1192	0/0:20,0:20:36.10:0,36,883	0/0:31,0:31:84.10:0,84,1725	0/0:15,0:14:27.08:0,27,746	0/0:27,0:27:76.72:0,77,1726	0/0:15,0:15:45.09:0,45,965	0/0:20,0:20:60.16:0,60,1407	0/0:20,0:20:36.94:0,37,627	0/0:23,0:23:33.10:0,33,748	0/0:29,0:28:78.23:0,78,1321	0/0:28,0:28:69.09:0,69,1490	0/0:29,0:29:75.24:0,75,1690	0/0:11,0:11:16.26:0,16,321	0/0:40,0:39:99:0,114,2406	0/0:20,0:20:54.16:0,54,1517	0/0:11,0:11:18.04:0,18,326	0/0:23,0:23:60.05:0,60,1216	0/0:13,0:13:17.28:0,17,229	0/0:21,0:21:57.17:0,57,1422	0/0:14,0:14:21.07:0,21,536	0/1:21,2:23:51.57:320,0,52	0/1:23,0:23:99:150,0,102	1/1:0,8:8:3.01:66,3,0
chr10	22074894	.	TTTTTTG	T	742.59	PASS	AB=0.885;AC=5;AF=0.089;AN=56;BaseQRankSum=5.601;DP=649;FS=9.691;HRun=0;HaplotypeScore=144.2557;InbreedingCoeff=0.6707;MQ=69.48;MQ0=7;MQRankSum=0.816;QD=14.28;ReadPosRankSum=3.491;VQSLOD=2.4352;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:42.06:0,42,1049	0/0:11,0:11:33.11:0,33,628	0/0:50,0:16:31.79:0,32,459	0/0:40,1:27:19.96:0,20,281	0/0:31,0:31:87.18:0,87,1774	0/0:22,0:22:57.13:0,57,1013	0/0:20,0:20:36.10:0,36,751	0/0:30,0:30:80.47:0,80,1412	0/0:16,0:15:30.08:0,30,651	0/0:26,0:26:75.10:0,75,1402	0/0:15,0:15:45.08:0,45,827	0/0:20,0:20:60.14:0,60,1207	0/0:21,0:21:39.92:0,40,564	0/0:23,0:23:33.04:0,33,598	0/0:30,0:29:80.99:0,81,1188	0/0:27,0:27:63.12:0,63,1220	0/0:29,0:29:75.16:0,75,1424	0/0:11,0:11:16.26:0,16,246	0/0:40,0:39:99:0,116,2008	0/0:21,0:21:57.11:0,57,1317	0/0:12,0:12:21.03:0,21,286	0/0:23,0:23:54.01:0,54,973	0/0:13,0:13:16.44:0,16,186	0/0:21,0:21:57.15:0,57,1211	0/0:15,0:15:24.06:0,24,484	1/1:19,2:21:16.71:478,17,0	0/1:19,3:23:27.66:333,0,28	1/1:8,0:8:3.01:47,3,0
chr10	22074895	.	TTTTTG	T	1073.93	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=2.887;DP=640;FS=8.042;HRun=0;HaplotypeScore=131.8688;InbreedingCoeff=0.8547;MQ=71.03;MQ0=6;MQRankSum=0.289;QD=21.48;ReadPosRankSum=4.115;VQSLOD=3.0113;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:27:42.06:0,42,938	0/0:12,0:12:36.07:0,36,563	0/0:49,0:17:34.85:0,35,438	0/0:41,0:27:29.59:0,30,284	0/0:31,0:31:87.10:0,87,1485	0/0:22,0:22:54.11:0,54,797	0/0:20,0:20:36.10:0,36,645	0/0:31,0:31:82.85:0,83,1210	0/0:16,0:15:30.07:0,30,545	0/0:27,0:27:75.03:0,75,1209	0/0:16,0:16:48.04:0,48,719	0/0:20,0:20:60.14:0,60,987	0/0:23,0:23:44.71:0,45,533	0/0:21,0:21:27.08:0,27,477	0/0:29,0:28:77.71:0,78,923	0/0:26,0:26:63.11:0,63,1010	0/0:27,0:27:69.11:0,69,1101	0/0:12,0:12:18.90:0,19,254	0/0:37,0:36:99:0,104,1619	0/0:21,0:21:57.06:0,57,1113	0/0:12,0:12:21:0,21,251	0/0:20,0:20:50.95:0,51,814	0/0:14,0:14:19.40:0,19,181	0/0:20,0:20:54.10:0,54,971	0/0:15,0:15:24.04:0,24,407	1/1:8,13:21:37.64:680,38,0	1/1:7,14:21:3.04:474,3,0	1/1:8,0:8:3.01:41,3,0
chr10	22075208	.	AT	A	5690.87	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=4.506;DP=596;FS=1.450;HRun=8;HaplotypeScore=133.8116;InbreedingCoeff=0.9972;MQ=94.76;MQ0=1;MQRankSum=-6.802;QD=23.81;ReadPosRankSum=1.457;VQSLOD=3.3558;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,31:36:84.13:811,84,0	1/1:1,10:11:26.96:248,27,0	0/0:36,0:33:46.68:0,47,568	0/0:32,0:29:53.46:0,53,480	0/0:23,0:23:63.19:0,63,761	0/0:25,0:25:75.22:0,75,894	0/0:17,0:17:39.12:0,39,471	1/1:4,24:28:72.04:674,72,0	1/1:2,12:14:30.04:290,30,0	0/0:15,0:15:42.12:0,42,495	0/0:18,0:18:48.15:0,48,580	0/0:20,0:20:60.16:0,60,700	0/0:15,0:15:45.14:0,45,542	0/0:22,0:22:59.20:0,59,685	1/1:2,29:31:81.13:782,81,0	1/1:1,15:16:36.06:348,36,0	1/1:0,22:22:63.05:599,63,0	1/1:1,12:13:36.06:348,36,0	1/1:4,11:15:33.04:318,33,0	1/1:3,21:24:57.08:549,57,0	1/1:2,27:29:75.12:724,75,0	0/0:16,0:16:45.14:0,45,544	0/0:20,0:20:57.15:0,57,665	0/0:19,0:19:51.15:0,51,605	0/0:27,0:27:78.20:0,78,926	0/0:19,0:19:14.64:0,15,497	0/0:20,0:20:57.17:0,57,678	0/0:13,0:13:39.12:0,39,471
chr10	22075374	.	ATTT	A	3149.85	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=5.959;DP=546;FS=1.989;HRun=15;HaplotypeScore=82.8876;InbreedingCoeff=0.9828;MQ=70.30;MQ0=1;MQRankSum=-3.098;QD=18.21;ReadPosRankSum=3.777;VQSLOD=3.0405;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:19:27.05:0,27,395	1/1:0,5:5:15.04:168,15,0	0/0:17,0:13:27.53:0,28,369	0/0:13,0:11:8.96:0,9,103	0/0:32,0:39:87.17:0,87,1359	0/0:18,0:22:58.38:0,58,915	0/0:15,0:19:42.08:0,42,653	1/1:4,23:29:61.52:677,62,0	1/1:2,12:15:31.54:367,32,0	0/0:19,0:23:58.17:0,58,874	0/0:12,0:14:27.03:0,27,351	0/0:16,0:18:54.18:0,54,878	0/0:20,0:21:51.12:0,51,816	0/0:13,0:13:18.05:0,18,288	0/0:14,0:32:51.13:0,51,734	1/1:3,12:15:22.39:266,22,0	1/1:6,19:27:47.86:506,48,0	1/1:8,11:20:23.77:253,24,0	1/1:4,11:18:38.86:433,39,0	1/1:8,17:25:38.83:437,39,0	1/1:6,11:19:17.23:257,17,0	0/0:15,0:15:33.11:0,33,573	0/0:16,0:18:36.07:0,36,495	0/0:19,0:20:48.15:0,48,795	0/0:10,0:14:36.02:0,36,474	0/0:6,0:11:21.07:0,21,334	0/0:14,0:31:39.10:0,39,570	0/0:4,0:13:21.07:0,21,324
chr10	22075717	.	C	CT	8867.65	PASS	AB=0.833;AC=34;AF=0.607;AN=56;BaseQRankSum=0.674;DP=580;FS=0.000;HRun=9;HaplotypeScore=103.9361;InbreedingCoeff=0.8723;MQ=66.17;MQ0=1;MQRankSum=-8.357;QD=24.56;ReadPosRankSum=1.822;VQSLOD=4.5487;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,5:10:15.93:166,16,0	0/0:8,0:8:24:0,24,208	0/1:14,0:12:5.18:5,0,85	0/0:15,0:13:20.20:0,20,161	1/1:5,26:31:46.13:732,46,0	1/1:6,13:19:19.05:429,19,0	1/1:8,15:23:48.12:523,48,0	0/0:41,0:41:77.93:0,78,673	0/0:15,0:15:35.98:0,36,312	0/1:11,11:22:4:404,0,4	1/1:6,19:26:71.99:748,72,0	1/1:2,14:17:38.41:459,38,0	1/1:6,18:24:63.15:679,63,0	1/1:5,17:22:57.15:622,57,0	1/1:9,13:22:60.12:632,60,0	0/0:14,0:14:26.97:0,27,231	0/0:24,0:24:65.99:0,66,573	0/0:15,0:15:41.99:0,42,364	0/0:32,0:33:82.69:0,83,708	0/0:29,0:29:77.97:0,78,677	0/0:24,0:24:59.97:0,60,517	1/1:1,18:20:56.99:611,57,0	1/1:6,14:21:44.94:465,45,0	1/1:4,7:11:7.01:284,7,0	1/1:7,11:18:36.10:396,36,0	1/1:4,18:22:54.15:597,54,0	1/1:5,26:31:81.19:883,81,0	1/1:3,5:8:21.06:231,21,0
chr10	22075743	.	CTTT	C	7061.56	PASS	AB=0.544;AC=32;AF=0.571;AN=56;BaseQRankSum=-2.869;DP=559;FS=5.067;HRun=12;HaplotypeScore=142.4230;InbreedingCoeff=0.5320;MQ=64.58;MQ0=1;MQRankSum=-6.704;QD=18.29;ReadPosRankSum=0.597;VQSLOD=2.7710;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,7:8:18.05:227,18,0	0/0:0,0:8:11.71:0,12,42	0/0:16,0:15:26.73:0,27,389	0/0:12,0:9:11.86:0,12,164	1/1:3,30:34:58.36:927,58,0	1/1:3,12:15:33.07:417,33,0	1/1:4,11:16:39.02:446,39,0	0/0:10,1:34:3.23:0,3,113	0/1:2,1:16:20.70:21,0,30	1/1:4,12:16:36.08:440,36,0	1/1:4,24:28:66.15:834,66,0	1/1:8,12:20:32.99:415,33,0	1/1:3,22:25:69.19:859,69,0	1/1:4,15:19:48.11:591,48,0	0/0:5,0:25:68.28:0,68,602	0/1:0,1:12:9.84:24,0,10	0/1:5,1:23:16.95:17,0,17	0/0:1,0:13:13.71:0,14,29	0/1:6,2:33:40.09:40,0,76	0/1:1,2:29:37.52:38,0,75	0/0:3,0:23:22.43:0,22,48	1/1:4,17:21:45.09:568,45,0	1/1:6,19:25:47.95:606,48,0	1/1:3,8:12:22.27:280,22,0	1/1:4,8:12:24:290,24,0	0/1:8,2:22:20.64:21,0,423	0/0:12,0:30:58:0,58,501	0/0:2,0:9:20.30:0,20,146
chr10	22075882	.	A	AT	5005.07	PASS	AB=0.895;AC=19;AF=0.339;AN=56;BaseQRankSum=-12.681;DP=539;FS=3.132;HRun=8;HaplotypeScore=53.8147;InbreedingCoeff=0.9159;MQ=71.45;MQ0=2;MQRankSum=-1.138;QD=27.05;ReadPosRankSum=-0.974;VQSLOD=5.1674;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:41.97:0,42,378	1/1:1,9:10:27.08:312,27,0	0/0:17,0:13:20.06:0,20,159	0/1:14,0:14:33.06:33,0,130	0/0:35,0:35:99:0,102,929	0/0:19,0:19:54.03:0,54,494	0/0:12,0:12:33.01:0,33,301	1/1:7,26:33:78.23:899,78,0	1/1:0,14:14:39.12:450,39,0	0/0:29,0:29:81.04:0,81,741	0/0:20,0:20:54.03:0,54,494	0/0:22,0:22:60:0,60,541	0/0:27,0:27:75.04:0,75,685	0/0:22,0:22:63.03:0,63,576	0/0:13,0:13:39.02:0,39,357	1/1:1,12:13:33.10:381,33,0	1/1:4,25:29:72.21:831,72,0	1/1:1,13:14:27.08:312,27,0	1/1:0,18:18:54.14:611,54,0	1/1:2,25:27:75.22:866,75,0	1/1:0,10:10:27.08:312,27,0	0/0:6,0:6:15:0,15,137	0/0:18,0:18:51.03:0,51,466	0/0:7,0:7:21.01:0,21,192	0/0:20,0:20:54.01:0,54,490	0/0:24,0:24:68.98:0,69,623	0/0:34,0:35:92.06:0,92,823	0/0:9,0:9:27.01:0,27,247
chr10	22076378	.	ATGT	A	895.04	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-5.294;DP=679;FS=7.433;HRun=0;HaplotypeScore=155.1443;InbreedingCoeff=0.7840;MQ=70.23;MQ0=2;MQRankSum=-0.902;QD=31.97;ReadPosRankSum=0.878;VQSLOD=3.9914;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,99,922	0/0:6,0:6:15.49:0,15,87	0/0:8,0:8:0.70:0,1,194	0/0:10,0:10:27.03:0,27,486	0/0:36,0:36:99:0,105,1029	0/0:31,0:31:87.07:0,87,792	0/0:19,0:19:45.01:0,45,405	0/0:41,0:41:96.05:0,96,518	0/0:23,0:23:49.91:0,50,178	0/0:29,0:29:84.03:0,84,776	0/0:25,0:25:66.08:0,66,670	0/0:25,0:25:63.07:0,63,581	0/0:29,0:29:78:0,78,705	0/0:31,0:31:90.04:0,90,862	1/1:1,27:28:57.19:990,57,0	0/0:28,0:28:65.26:0,65,247	0/0:22,0:21:51.90:0,52,239	0/0:24,0:24:53.29:0,53,225	0/0:21,0:21:44.09:0,44,182	0/0:31,0:30:75.87:0,76,316	0/0:25,0:25:59.40:0,59,279	0/0:20,0:20:56.97:0,57,512	0/0:27,0:27:78.09:0,78,719	0/0:13,0:13:36.04:0,36,332	0/0:32,0:32:84.08:0,84,770	0/0:19,0:19:54.17:0,54,1156	0/0:35,0:35:99:0,105,2083	0/0:5,0:5:15.05:0,15,341
chr10	22076380	.	GT	G	9159.35	PASS	AB=1.000;AC=47;AF=0.839;AN=56;BaseQRankSum=7.340;DP=664;FS=3.125;HRun=9;HaplotypeScore=96.4844;InbreedingCoeff=0.8516;MQ=69.97;MQ0=2;MQRankSum=-0.395;QD=15.34;ReadPosRankSum=2.579;VQSLOD=5.1610;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,34:36:93.05:851,93,0	1/1:1,0:6:10.18:30,10,0	0/1:7,0:7:17.23:17,0,57	0/0:10,0:10:17.76:0,18,167	1/1:4,33:37:84.01:769,84,0	1/1:3,28:31:78.04:714,78,0	1/1:0,18:18:42.02:384,42,0	1/1:6,0:36:55.50:169,55,0	1/1:1,0:24:19.28:95,19,0	1/1:6,22:28:66.03:604,66,0	1/1:2,20:22:54.01:494,54,0	1/1:0,26:26:63.01:577,63,0	1/1:2,27:29:71.98:659,72,0	1/1:4,28:32:75.03:686,75,0	1/1:27,0:27:40.43:126,40,0	1/1:1,0:27:50.93:150,51,0	1/1:4,0:21:32.18:95,32,0	1/1:2,0:23:38.68:114,39,0	1/1:1,0:21:40.74:120,41,0	1/1:2,0:30:57.03:167,57,0	1/1:4,0:25:38.70:114,39,0	1/1:1,18:19:51.03:467,51,0	1/1:0,26:26:78.04:714,78,0	1/1:0,13:13:36.02:330,36,0	1/1:1,30:31:78.04:714,78,0	0/0:17,0:17:48.14:0,48,554	0/0:35,0:35:87.24:0,87,993	0/0:5,0:5:15.04:0,15,173
chr10	22077415	.	TA	T	4473.69	PASS	AB=0.875;AC=19;AF=0.339;AN=56;BaseQRankSum=12.559;DP=583;FS=0.338;HRun=9;HaplotypeScore=101.0851;InbreedingCoeff=0.8984;MQ=84.80;MQ0=0;MQRankSum=-1.797;QD=21.93;ReadPosRankSum=-1.029;VQSLOD=4.4151;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:49.14:0,49,585	1/1:0,4:4:12.01:110,12,0	0/0:26,0:26:41.11:0,41,478	0/0:13,0:13:20.62:0,21,204	0/0:24,0:24:72.17:0,72,800	0/0:21,0:21:60.11:0,60,669	0/0:25,1:26:47.73:0,48,784	1/1:3,32:35:96.03:874,96,0	1/1:0,16:16:48.03:439,48,0	0/1:18,3:21:22.23:22,0,514	0/0:27,0:27:54.16:0,54,623	0/0:17,0:17:42.12:0,42,485	0/0:28,0:28:75.22:0,75,859	0/0:19,0:19:54.16:0,54,619	0/0:21,0:21:51.13:0,51,572	1/1:2,21:23:60.03:549,60,0	1/1:1,25:26:69.04:632,69,0	1/1:3,17:20:48.02:439,48,0	1/1:1,19:20:56.98:513,57,0	1/1:4,24:28:71.95:648,72,0	1/1:1,10:11:27.01:247,27,0	0/0:10,0:10:24.07:0,24,277	0/0:26,1:27:34.53:0,35,633	0/0:17,0:17:42.11:0,42,476	0/0:23,0:23:60.17:0,60,685	0/0:6,0:34:88.87:0,89,506	0/0:2,0:25:59.66:0,60,303	0/0:0,0:2:5.68:0,6,29
chr10	22078428	.	TA	T	4972.84	PASS	AB=0.971;AC=27;AF=0.482;AN=56;BaseQRankSum=9.042;DP=531;FS=9.511;HRun=10;HaplotypeScore=63.7717;InbreedingCoeff=0.8955;MQ=83.58;MQ0=1;MQRankSum=-0.275;QD=17.95;ReadPosRankSum=3.145;VQSLOD=5.2575;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,25:27:65.96:573,66,0	1/1:1,10:11:29.99:260,30,0	0/1:32,1:26:7.92:8,0,270	0/0:25,0:18:1.64:0,2,138	0/0:25,0:26:41.16:0,41,645	0/0:13,0:13:39.10:0,39,422	0/0:12,0:12:33.09:0,33,365	1/1:9,14:23:22.18:315,22,0	1/1:1,13:14:35.99:313,36,0	0/0:23,0:23:57.11:0,57,601	0/0:22,0:22:51.10:0,51,542	0/0:17,0:17:48.12:0,48,524	0/0:16,0:16:45.12:0,45,496	0/0:24,0:24:66.15:0,66,711	0/0:16,0:16:33.09:0,33,365	1/1:2,20:22:50.99:443,51,0	1/1:2,16:18:41.99:364,42,0	1/1:1,27:28:74.98:651,75,0	1/1:2,14:16:44.49:373,44,0	1/1:5,18:23:50.80:424,51,0	1/1:1,4:5:9:78,9,0	0/0:9,0:9:24.06:0,24,258	0/0:12,0:12:27.06:0,27,291	0/0:8,0:8:21.06:0,21,232	0/0:31,0:31:63.10:0,63,681	1/1:5,29:34:83.96:729,84,0	1/1:1,16:17:38.64:338,39,0	1/1:0,6:6:12:104,12,0
chr10	22078755	.	A	ATG	22026.62	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-5.175;DP=507;FS=29.626;HRun=0;HaplotypeScore=82.4510;InbreedingCoeff=0.9639;MQ=73.48;MQ0=2;MQRankSum=-8.125;QD=47.17;ReadPosRankSum=5.137;VQSLOD=3.4752;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,23:25:57.20:1038,57,0	1/1:1,5:6:18.06:329,18,0	0/0:20,0:18:42.11:0,42,551	0/0:20,0:18:48.94:0,49,633	1/1:4,17:21:42.13:738,42,0	1/1:4,21:26:72.25:1313,72,0	1/1:3,18:21:60.19:1059,60,0	1/1:5,17:22:51.16:881,51,0	1/1:2,8:11:30.10:540,30,0	1/1:2,25:27:81.28:1470,81,0	1/1:5,13:18:45.15:807,45,0	1/1:0,16:16:45.15:823,45,0	1/1:5,16:21:57.18:1007,57,0	1/1:1,28:29:78.27:1422,78,0	1/1:6,6:12:33.07:534,33,0	1/1:1,22:23:60.21:1099,60,0	1/1:7,13:20:51.17:934,51,0	1/1:1,15:16:42.14:766,42,0	1/1:11,6:17:48.14:754,48,0	1/1:0,17:17:51.17:935,51,0	1/1:2,19:21:63.22:1146,63,0	1/1:2,6:8:21.07:370,21,0	1/1:1,16:18:41.82:768,42,0	1/1:7,11:16:36.12:657,36,0	1/1:6,14:20:54.19:975,54,0	1/1:2,18:19:57.19:1003,57,0	1/1:0,11:11:27.09:495,27,0	1/1:0,3:3:9.03:165,9,0
chr10	22078781	.	TG	T	4560.57	PASS	AB=0.964;AC=33;AF=0.589;AN=56;BaseQRankSum=0.296;DP=533;FS=8.706;HRun=11;HaplotypeScore=132.4482;InbreedingCoeff=0.6876;MQ=67.54;MQ0=1;MQRankSum=-8.751;QD=11.91;ReadPosRankSum=4.929;VQSLOD=3.2843;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:14,14:30:51.97:399,52,0	0/0:13,1:14:14.42:0,14,333	0/1:22,0:17:7.20:7,0,117	0/1:19,0:16:9.35:9,0,13	1/1:6,17:23:50.93:418,51,0	1/1:6,21:28:58.95:473,59,0	1/1:7,16:23:38.93:320,39,0	0/0:12,0:12:21.02:0,21,207	0/0:15,0:15:36.05:0,36,365	1/1:7,15:23:46.76:375,47,0	1/1:3,18:21:44.86:357,45,0	1/1:4,8:12:26.95:219,27,0	1/1:3,21:24:56.90:467,57,0	1/1:8,22:30:71.88:585,72,0	1/1:2,4:7:14.02:104,14,0	0/0:26,1:27:35.50:0,35,561	0/1:22,1:23:1.35:1,0,260	0/0:16,0:15:19.07:0,19,255	0/1:22,1:23:7.78:8,0,310	0/1:17,2:19:25.19:25,0,168	0/0:17,0:17:26.99:0,27,264	1/1:3,8:11:20.97:172,21,0	1/1:4,10:14:26.97:221,27,0	1/1:4,10:14:20.01:153,20,0	1/1:5,10:15:29.96:246,30,0	0/0:18,0:20:20.53:0,21,158	0/0:16,0:20:26.08:0,26,163	0/0:6,0:8:17.39:0,17,111
chr10	22078814	.	AT	A	3785.75	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=4.695;DP=478;FS=10.518;HRun=7;HaplotypeScore=89.6081;InbreedingCoeff=0.9891;MQ=63.24;MQ0=0;MQRankSum=0.000;QD=26.47;ReadPosRankSum=1.969;VQSLOD=3.7006;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:93.30:0,93,1170	1/1:0,11:11:30.07:305,30,0	0/0:17,0:13:33.37:0,33,404	0/0:16,0:16:27.69:0,28,385	0/0:23,0:23:60.02:0,60,730	0/0:20,0:20:54.14:0,54,661	0/0:19,0:19:54.17:0,54,676	1/1:2,15:17:42.09:428,42,0	1/1:2,17:19:51.11:520,51,0	0/0:22,0:22:54.17:0,54,678	0/0:20,0:20:43.57:0,44,574	0/0:16,0:16:41.97:0,42,458	0/0:23,0:23:57.18:0,57,705	0/0:20,0:20:57.13:0,57,685	0/0:16,0:16:48.11:0,48,570	1/1:3,17:20:54.11:550,54,0	1/1:1,19:20:57.13:581,57,0	1/1:1,11:12:33.07:336,33,0	1/1:2,13:15:39.08:398,39,0	1/1:2,6:8:21.03:208,21,0	1/1:3,18:21:45.09:459,45,0	0/0:16,0:16:48.13:0,48,578	0/0:9,0:9:21.07:0,21,259	0/0:16,0:16:36.12:0,36,452	0/0:11,0:11:30.10:0,30,377	0/0:12,0:12:36.08:0,36,436	0/0:18,0:18:54.17:0,54,679	0/0:5,0:5:8.99:0,9,95
chr10	22079478	.	CTT	C	3086.53	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-4.953;DP=433;FS=11.330;HRun=11;HaplotypeScore=61.0316;InbreedingCoeff=0.8915;MQ=62.69;MQ0=7;MQRankSum=-2.554;QD=19.91;ReadPosRankSum=0.693;VQSLOD=1.4192;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,105,1450	1/1:0,8:8:21.05:224,21,0	0/0:21,0:8:6.31:0,6,26	0/0:31,0:11:5.37:0,5,100	0/0:3,0:18:26.91:0,27,92	0/0:1,0:6:9.98:0,10,34	0/0:3,0:10:5.88:0,6,27	1/1:7,19:26:54.07:558,54,0	1/1:0,19:19:48.12:511,48,0	0/0:0,0:4:9.98:0,10,34	0/0:1,0:14:24.40:0,24,83	0/0:0,0:9:9.51:0,10,38	0/0:1,0:14:20.19:0,20,84	0/0:1,0:10:17.47:0,17,60	0/0:20,0:20:57.18:0,57,845	1/1:2,15:17:29.64:319,30,0	1/1:2,19:21:45.11:479,45,0	1/1:5,21:26:45.08:479,45,0	1/1:6,11:16:15.31:301,15,0	1/1:1,13:14:29.79:297,30,0	1/1:1,5:6:12.01:128,12,0	0/0:0,0:7:13.45:0,13,44	0/0:2,0:7:9.86:0,10,34	0/0:3,0:12:15.40:0,15,60	0/0:1,0:17:42.42:0,42,146	0/0:3,0:19:43.47:0,43,397	0/0:2,0:7:11.98:0,12,105	0/0:1,0:8:9.01:0,9,86
chr10	22080317	.	T	TTAA	41685.42	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-2.808;DP=726;FS=0.573;HRun=0;HaplotypeScore=107.3148;InbreedingCoeff=0.9893;MQ=77.73;MQ0=0;MQRankSum=-11.062;QD=61.57;ReadPosRankSum=5.619;VQSLOD=6.6391;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,28:30:75.26:1737,75,0	1/1:2,10:12:21.07:462,21,0	0/0:26,0:26:72.23:0,72,1191	0/0:23,0:23:43.88:0,44,940	1/1:3,29:34:87.09:1811,87,0	1/1:2,30:31:84.25:1935,84,0	1/1:1,17:19:51.17:1173,51,0	1/1:7,28:38:99:2427,108,0	1/1:1,30:31:90.31:2126,90,0	1/1:3,27:30:84.29:1973,84,0	1/1:0,16:19:51.17:1170,51,0	1/1:0,27:27:81.28:1913,81,0	1/1:1,29:30:87.30:2056,87,0	1/1:2,26:30:75.26:1701,75,0	1/1:2,36:41:99:2379,105,0	1/1:4,30:35:84.22:1930,84,0	1/1:1,18:19:54.19:1276,54,0	1/1:0,10:10:30.10:709,30,0	1/1:2,9:11:30.10:678,30,0	1/1:2,21:24:69.20:1547,69,0	1/1:0,19:20:48.12:1083,48,0	1/1:3,27:32:87.25:1937,87,0	1/1:4,23:28:75.18:1686,75,0	1/1:1,21:22:66.18:1508,66,0	1/1:1,25:27:72.25:1701,72,0	1/1:1,36:38:99:2604,114,0	1/1:2,28:33:81.23:1808,81,0	1/1:0,5:5:15.05:355,15,0
chr10	22081364	.	GA	G	4694.19	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=13.779;DP=740;FS=1.030;HRun=9;HaplotypeScore=72.0400;InbreedingCoeff=0.9990;MQ=79.89;MQ0=0;MQRankSum=-2.208;QD=23.01;ReadPosRankSum=-0.093;VQSLOD=5.4952;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:75.21:0,75,854	1/1:1,9:10:27.01:247,27,0	0/0:24,1:25:32.67:0,33,597	0/0:15,0:14:21.03:0,21,222	0/0:45,1:47:99:0,105,1439	0/0:29,1:30:56.78:0,57,907	0/0:30,0:30:81.22:0,81,923	1/1:6,28:34:84.04:768,84,0	1/1:3,26:29:75.04:686,75,0	0/0:35,0:35:93.26:0,93,1063	0/0:25,0:25:66.20:0,66,761	0/0:31,0:31:84.23:0,84,957	0/0:26,1:27:47.76:0,48,803	0/0:30,0:30:87.25:0,87,995	0/0:38,0:39:99:0,102,1157	1/1:5,27:32:78.02:714,78,0	1/1:3,21:24:60.03:549,60,0	1/1:0,11:11:30.02:275,30,0	1/1:2,13:15:39.01:356,39,0	1/1:4,29:34:81.03:741,81,0	1/1:1,14:15:39.02:357,39,0	0/0:28,0:28:81.22:0,81,916	0/0:24,0:24:63.19:0,63,727	0/0:26,0:26:72.21:0,72,831	0/0:23,0:23:57.15:0,57,646	0/0:34,0:35:87.09:0,87,981	0/0:19,0:19:54.12:0,54,608	0/0:18,0:18:54.16:0,54,623
chr10	22083435	.	AACAACAACACACACACAC	A	6640.57	PASS	AB=0.997;AC=19;AF=0.365;AN=52;BaseQRankSum=11.310;DP=673;FS=7.611;HRun=0;HaplotypeScore=254.7784;InbreedingCoeff=0.4223;MQ=47.01;MQ0=46;MQRankSum=-9.575;QD=19.08;ReadPosRankSum=4.198;VQSLOD=1.8504;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:39,0:34:54.81:55,0,528	0/0:12,0:12:30.10:0,30,1283	./.	./.	1/1:5,22:26:30.10:835,30,0	0/1:16,0:13:99:240,0,99	0/1:25,0:23:3.05:638,0,3	0/0:30,0:28:73.09:0,73,1962	0/0:21,0:21:54.17:0,54,2464	0/1:32,0:26:99:1026,0,178	0/1:19,0:18:47.57:231,0,48	1/1:34,0:33:29.67:743,30,0	1/1:37,0:35:14.41:1076,14,0	1/1:30,0:29:29.90:785,30,0	0/0:23,0:30:72.72:0,73,2207	0/0:36,0:35:96.31:0,96,4099	0/0:25,0:25:60.06:0,60,2938	0/0:14,0:14:42.14:0,42,2219	0/0:17,0:17:37.85:0,38,1071	0/0:19,0:18:41.42:0,41,2057	0/0:39,0:40:99:0,106,4222	1/1:20,0:18:9.03:245,9,0	1/1:16,0:15:9.08:302,9,0	0/1:32,0:29:99:250,0,144	0/1:19,0:15:27.69:213,0,28	0/0:21,0:19:48.83:0,49,1722	0/0:23,0:23:51.64:0,52,2058	0/0:5,0:5:12.04:0,12,534
chr10	22083438	.	AACAACACACACACAC	A	9124.10	PASS	AB=0.693;AC=22;AF=0.423;AN=52;BaseQRankSum=9.995;DP=676;FS=9.200;HRun=0;HaplotypeScore=216.8887;InbreedingCoeff=0.6575;MQ=47.48;MQ0=42;MQRankSum=-8.561;QD=25.85;ReadPosRankSum=3.259;VQSLOD=2.9087;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:39,0:33:72.14:72,0,325	0/0:11,0:11:27.09:0,27,1060	./.	./.	1/1:26,0:26:30.07:678,30,0	0/1:5,13:16:28.06:328,0,28	1/1:23,0:21:39.08:871,39,0	0/0:30,0:28:72.07:0,72,1844	0/0:19,0:19:45.15:0,45,1947	0/1:10,24:29:80.67:1355,0,81	1/1:5,19:22:14.93:289,15,0	1/1:2,31:32:29.74:1226,30,0	1/1:3,31:32:35.99:1503,36,0	1/1:2,29:30:29.98:1213,30,0	0/0:25,0:31:66.60:0,67,1627	0/0:36,0:35:96.20:0,96,3362	0/0:25,0:25:57.19:0,57,2578	0/0:14,0:14:41.97:0,42,1734	0/0:18,0:17:38.20:0,38,969	0/0:18,0:17:40.40:0,40,1771	0/0:41,0:41:96.46:0,96,3537	1/1:4,16:18:12.04:406,12,0	1/1:2,15:16:11.16:519,11,0	0/1:12,21:30:99:360,0,133	1/1:6,12:14:9.03:304,9,0	0/0:22,0:20:48.80:0,49,1419	0/0:19,0:23:51.60:0,52,1713	0/0:4,0:5:12.04:0,12,456
chr10	22083440	.	CA	C	950.79	PASS	AB=0.893;AC=20;AF=0.385;AN=52;BaseQRankSum=10.856;DP=675;FS=5.887;HRun=2;HaplotypeScore=127.5773;InbreedingCoeff=0.0272;MQ=47.63;MQ0=42;MQRankSum=-5.709;QD=2.42;ReadPosRankSum=5.693;VQSLOD=-0.1538;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:34:11.83:0,12,172	0/0:12,0:12:26.57:0,27,306	./.	./.	0/1:27,0:26:22.42:22,0,39	0/1:18,1:16:16.23:16,0,42	0/1:10,13:21:94.94:143,0,95	0/0:28,0:26:56.43:0,56,571	0/0:19,0:19:50.12:0,50,595	0/1:33,1:28:50.18:123,0,50	0/1:22,1:21:10.99:31,0,11	1/1:33,0:32:17.15:129,17,0	1/1:33,0:31:4.01:94,4,0	0/1:31,0:30:13.84:86,0,14	0/1:17,14:30:99:123,0,417	0/0:35,1:35:98.66:0,99,1206	0/0:26,0:26:60.92:0,61,701	0/0:14,0:14:41.97:0,42,543	0/0:17,0:16:27.55:0,28,289	0/0:19,0:18:44.03:0,44,470	0/0:44,0:44:99:0,106,1173	1/1:20,0:18:5.25:27,5,0	1/1:17,0:16:10.69:77,11,0	0/1:27,6:30:0.71:121,0,1	0/1:17,0:13:9.27:9,0,23	0/1:23,0:21:62.46:62,0,312	0/1:19,5:24:35.39:35,0,220	0/1:4,1:5:16.75:17,0,59
chr10	22083441	.	A	ACAC	1696.57	PASS	AB=0.937;AC=14;AF=0.269;AN=52;BaseQRankSum=1.879;DP=688;FS=3.315;HRun=0;HaplotypeScore=156.4716;InbreedingCoeff=-0.3634;MQ=47.56;MQ0=41;MQRankSum=-2.008;QD=4.86;ReadPosRankSum=-1.033;VQSLOD=2.6391;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:34:10.39:0,10,288	0/0:12,0:12:27.09:0,27,429	./.	./.	0/1:27,0:26:13.65:14,0,142	0/1:18,0:16:31.43:31,0,95	0/1:22,0:21:99:143,0,294	0/0:29,0:27:53.37:0,53,658	0/0:19,0:19:51.16:0,51,762	0/1:31,0:28:52.16:52,0,219	0/1:23,0:21:13.08:13,0,45	0/1:33,0:32:8.50:8,0,73	0/0:31,0:31:29.92:0,30,208	0/1:30,0:30:27.12:27,0,143	0/1:32,0:32:99:448,0,416	0/0:36,0:35:99:0,99,1471	0/0:22,0:26:57.85:0,58,904	0/0:14,0:14:42.14:0,42,629	0/0:17,0:16:22.21:0,22,314	0/0:20,0:19:43.35:0,43,648	0/0:45,0:45:99:0,105,1476	0/0:18,0:18:4.87:0,5,19	0/1:17,0:16:18.60:28,0,19	0/1:33,0:30:57.59:100,0,58	0/1:14,0:13:6.95:7,0,79	0/1:17,8:26:99:436,0,301	0/1:19,1:26:99:426,0,206	0/1:5,0:5:41.21:111,0,41
chr10	22083444	.	ACACAC	A	3199.67	PASS	AB=0.932;AC=20;AF=0.385;AN=52;BaseQRankSum=11.994;DP=708;FS=4.872;HRun=0;HaplotypeScore=159.0739;InbreedingCoeff=0.4906;MQ=47.80;MQ0=39;MQRankSum=-10.327;QD=9.12;ReadPosRankSum=5.652;VQSLOD=2.1987;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:12,26:34:13.50:325,13,0	0/0:11,0:11:27.07:0,27,610	./.	./.	0/1:25,0:26:23.09:266,0,23	0/1:19,0:16:26:115,0,26	0/1:12,0:17:61.59:351,0,62	0/0:28,0:27:31.94:0,32,1313	0/0:21,0:21:60.20:0,60,1458	0/1:34,0:28:99:433,0,99	0/1:22,0:21:13.67:80,0,14	1/1:32,0:32:29.91:341,30,0	1/1:33,0:31:36.04:473,36,0	1/1:31,0:30:30.03:405,30,0	0/0:33,0:32:56.68:0,57,1101	0/0:38,0:37:99:0,101,2237	0/0:25,0:25:63.14:0,63,1610	0/0:17,0:16:45.12:0,45,903	0/0:22,0:21:22.18:0,22,833	0/0:24,0:23:25.14:0,25,1384	0/0:51,0:51:99:0,121,2939	1/1:18,0:18:12.04:176,12,0	1/1:18,0:16:12.49:130,12,0	0/1:35,0:31:99:148,0,105	1/1:16,0:13:9.03:148,9,0	0/0:28,0:26:69.37:0,69,1592	0/0:26,0:26:57.02:0,57,1298	0/0:7,0:7:18.06:0,18,446
chr10	22083452	.	AC	A	1119.70	PASS	AB=0.927;AC=20;AF=0.370;AN=54;BaseQRankSum=13.196;DP=701;FS=4.043;HRun=1;HaplotypeScore=125.3139;InbreedingCoeff=0.4856;MQ=47.85;MQ0=34;MQRankSum=-9.229;QD=3.25;ReadPosRankSum=5.266;VQSLOD=0.4261;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:41,1:36:7.83:8,0,160	0/0:12,0:12:29.06:0,29,351	0/0:12,1:1:0:0,0,0	./.	0/1:25,0:26:57.63:113,0,58	0/1:18,0:16:16.11:16,0,28	0/1:10,7:15:17.44:275,0,17	0/0:26,0:25:72.23:0,72,1000	0/0:23,0:23:64.26:0,64,858	0/1:34,1:29:89.32:269,0,89	1/1:21,0:20:11.43:75,11,0	1/1:33,0:32:25.46:113,25,0	1/1:31,0:31:31.71:155,32,0	1/1:32,0:30:26.34:140,26,0	0/0:32,0:31:57.13:0,57,741	0/0:35,0:34:89.29:0,89,1243	0/0:24,0:24:60.97:0,61,861	0/0:16,0:15:39.06:0,39,525	0/0:23,0:20:56.19:0,56,705	0/0:24,0:23:53.98:0,54,780	0/0:51,0:51:99:0,125,1735	1/1:18,0:18:10.23:39,10,0	1/1:17,1:17:8.68:43,9,0	0/1:34,1:32:14.86:15,0,135	1/1:15,0:13:8.29:48,8,0	0/0:27,0:25:69.89:0,70,995	0/0:23,0:23:51.15:0,51,722	0/0:10,0:10:27.09:0,27,377
chr10	22084434	.	G	GTATATATATATATATATA	4068.97	PASS	AC=10;AF=0.208;AN=48;BaseQRankSum=4.940;DP=458;FS=1.540;HRun=0;HaplotypeScore=224.0416;InbreedingCoeff=0.8957;MQ=74.96;MQ0=4;MQRankSum=-7.294;QD=76.77;ReadPosRankSum=-3.303;VQSLOD=2.8082;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:57.15:0,57,2672	./.	0/0:27,0:23:55.65:0,56,2133	0/0:21,0:17:47.96:0,48,1717	0/0:36,0:36:99:0,106,4802	0/0:18,0:18:48.16:0,48,2177	0/0:14,0:14:36.12:0,36,1631	1/1:27,0:26:60.17:2143,60,0	./.	0/0:35,0:35:93.31:0,93,4086	0/0:27,0:27:72.21:0,72,3016	0/0:19,0:19:51.16:0,51,2294	0/0:24,0:24:66.23:0,66,3267	0/0:18,0:18:54.17:0,54,2345	0/0:18,0:18:48.16:0,48,2358	1/1:3,0:4:3.01:213,3,0	1/1:6,0:7:3.01:38,3,0	1/1:7,2:10:15.05:863,15,0	1/1:4,1:5:12.04:812,12,0	./.	./.	0/0:12,0:12:33.11:0,33,1522	0/0:18,0:18:48.14:0,48,2112	0/0:8,0:8:21.07:0,21,1003	0/0:15,0:15:39.13:0,39,1736	0/0:20,0:20:51.16:0,51,2355	0/0:39,0:39:99:0,114,4922	0/0:6,0:6:18.03:0,18,627
chr10	22085272	.	A	AT	10555.68	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-14.098;DP=658;FS=0.629;HRun=8;HaplotypeScore=64.1488;InbreedingCoeff=0.9996;MQ=77.10;MQ0=0;MQRankSum=-1.797;QD=28.76;ReadPosRankSum=3.246;VQSLOD=5.0173;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:90.04:0,90,824	0/0:16,0:16:45:0,45,407	0/0:13,0:14:27.41:0,27,259	0/0:16,0:17:28.06:0,28,244	1/1:3,20:23:57.17:658,57,0	1/1:1,22:23:66.20:762,66,0	1/1:3,20:23:51.15:589,51,0	0/0:33,0:33:81.02:0,81,738	0/0:19,0:19:47.12:0,47,438	1/1:1,21:22:63.19:727,63,0	1/1:2,14:16:39.12:450,39,0	1/1:4,21:25:54.16:623,54,0	1/1:3,19:22:51.15:588,51,0	1/1:5,26:31:75.22:866,75,0	0/0:31,0:31:84.02:0,84,764	0/0:27,0:27:75.02:0,75,682	0/0:23,0:23:63.03:0,63,576	0/0:13,0:13:30.01:0,30,275	0/0:19,0:19:44.94:0,45,412	0/0:28,0:28:75.02:0,75,682	0/0:20,0:20:51.02:0,51,466	1/1:3,23:26:66.15:747,66,0	1/1:3,26:30:75.05:837,75,0	1/1:3,31:34:93.28:1073,93,0	1/1:2,21:23:60.18:690,60,0	1/1:3,18:21:29.70:596,30,0	1/1:3,26:29:66.03:762,66,0	1/1:2,17:19:51.15:589,51,0
chr10	22085497	.	A	AT	4997.99	PASS	AB=0.997;AC=41;AF=0.732;AN=56;BaseQRankSum=-2.967;DP=604;FS=42.493;HRun=1;HaplotypeScore=110.4150;InbreedingCoeff=-0.0178;MQ=79.52;MQ0=1;MQRankSum=0.205;QD=8.81;ReadPosRankSum=-0.064;VQSLOD=0.1140;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:31,0:31:69.39:468,69,0	1/1:4,0:4:8.98:76,9,0	0/0:19,0:20:20.11:0,20,418	0/0:17,0:16:39.37:0,39,363	0/1:30,0:30:42.34:53,0,42	0/1:16,0:16:9.44:34,0,9	1/1:25,0:25:7.94:193,8,0	1/1:18,2:20:53.86:436,54,0	1/1:18,1:19:30:287,30,0	0/1:26,0:26:16.70:98,0,17	0/1:16,0:16:12.99:13,0,64	0/1:26,0:26:25.29:25,0,50	0/1:29,0:29:64.06:64,0,64	0/1:42,0:42:75.18:180,0,75	1/1:44,0:44:0.58:131,1,0	1/1:21,1:22:47.90:423,48,0	1/1:18,1:19:44.76:407,45,0	1/1:7,1:8:18.02:172,18,0	1/1:10,0:10:29.87:263,30,0	1/1:13,2:15:23.74:225,24,0	1/1:9,19:28:35.61:392,36,0	0/1:22,0:22:46.31:46,0,81	0/1:17,0:17:30.89:31,0,52	0/1:26,1:27:7.02:110,0,7	0/1:17,0:17:11.45:68,0,11	1/1:30,0:30:45.47:451,45,0	1/1:20,0:20:50.22:282,50,0	1/1:4,0:4:11.72:68,12,0
chr10	22085498	.	T	TTC	5974.27	PASS	AB=1.000;AC=37;AF=0.661;AN=56;BaseQRankSum=-9.144;DP=615;FS=1.417;HRun=0;HaplotypeScore=123.4155;InbreedingCoeff=0.0938;MQ=79.29;MQ0=1;MQRankSum=-1.079;QD=11.17;ReadPosRankSum=-5.163;VQSLOD=3.6567;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:30:57.34:325,57,0	1/1:0,4:4:8.99:140,9,0	0/0:20,0:20:50.24:0,50,537	0/0:17,0:17:41.13:0,41,417	0/1:30,0:30:17.74:18,0,140	0/1:16,0:16:12.44:12,0,62	0/1:24,0:26:68.66:125,0,69	1/1:3,16:21:53.89:531,54,0	1/1:4,15:21:35.76:573,36,0	0/1:26,0:26:58.29:58,0,92	0/0:16,0:16:8.73:0,9,136	0/0:26,0:26:7.09:0,7,153	0/1:29,0:29:28.54:29,0,155	0/1:41,0:42:99:128,0,212	0/1:44,0:44:58.25:58,0,138	1/1:3,20:24:48.12:888,48,0	1/1:1,18:19:44.85:799,45,0	1/1:1,8:9:18.06:359,18,0	1/1:3,9:13:30.03:447,30,0	1/1:3,12:16:23.97:361,24,0	1/1:23,5:28:35.91:492,36,0	0/1:22,0:22:16.74:17,0,164	0/1:16,0:17:16.12:16,0,110	0/1:27,0:27:46.45:46,0,98	0/1:16,0:17:38.06:38,0,77	1/1:8,0:30:16.92:290,17,0	1/1:1,0:20:41.75:181,42,0	1/1:0,0:4:10.79:44,11,0
chr10	22085821	.	ATCTCTC	A	7984.68	PASS	AB=0.831;AC=46;AF=0.885;AN=52;BaseQRankSum=0.129;DP=422;FS=15.380;HRun=0;HaplotypeScore=186.6662;InbreedingCoeff=0.5201;MQ=43.54;MQ0=5;MQRankSum=-0.034;QD=21.29;ReadPosRankSum=2.808;VQSLOD=3.1910;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:6,3:13:12.51:217,13,0	1/1:1,0:3:6.02:84,6,0	0/0:22,0:9:24.08:0,24,566	0/0:15,0:12:20.93:0,21,583	1/1:6,11:26:18.06:326,18,0	1/1:4,9:20:27.09:504,27,0	1/1:5,6:14:15.05:301,15,0	1/1:14,0:22:12.27:217,12,0	1/1:4,0:16:24.08:348,24,0	1/1:5,8:20:48.16:883,48,0	1/1:2,6:13:18.03:346,18,0	1/1:2,6:14:18.06:374,18,0	1/1:7,11:24:36.12:731,36,0	1/1:3,12:23:39.13:802,39,0	1/1:1,0:18:30.10:419,30,0	1/1:4,0:15:15.05:211,15,0	1/1:2,0:12:8.39:92,8,0	1/1:1,0:7:12.04:173,12,0	1/1:2,0:9:18.06:260,18,0	1/1:4,0:20:26.58:345,27,0	./.	1/1:2,6:13:12.04:259,12,0	1/1:3,6:14:15.05:301,15,0	1/1:2,6:10:9.50:195,10,0	1/1:1,8:13:18.06:389,18,0	0/1:7,1:10:82.74:137,0,83	0/1:22,1:25:72.46:72,0,439	./.
chr10	22087996	.	T	TC	12429.82	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-13.696;DP=529;FS=3.373;HRun=3;HaplotypeScore=46.3160;InbreedingCoeff=0.9933;MQ=75.91;MQ0=0;MQRankSum=-0.708;QD=38.84;ReadPosRankSum=4.606;VQSLOD=4.7276;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,20:22:48.16:672,48,0	0/0:5,0:5:15.05:0,15,180	0/0:11,0:11:33.09:0,33,387	0/0:10,0:10:24.04:0,24,272	1/1:2,32:34:96.25:1320,96,0	1/1:2,25:27:75.25:1050,75,0	1/1:0,6:6:15.05:210,15,0	0/0:45,0:44:99:0,129,1521	0/0:16,0:16:45.11:0,45,517	1/1:2,25:27:75.22:1012,75,0	1/1:0,19:19:57.19:790,57,0	1/1:0,19:19:51.17:714,51,0	1/1:0,24:24:69.23:965,69,0	1/1:0,16:16:48.16:672,48,0	0/0:19,0:19:48.13:0,48,564	1/1:1,13:14:36.12:504,36,0	0/0:32,0:32:90.28:0,90,1079	0/0:14,0:14:42.11:0,42,486	0/0:13,0:13:36.11:0,36,432	0/0:31,0:31:90.26:0,90,1059	0/0:13,0:13:33.10:0,33,396	1/1:0,7:7:21.07:285,21,0	1/1:1,12:13:39.13:541,39,0	1/1:0,7:7:18.06:252,18,0	1/1:0,22:22:66.22:924,66,0	1/1:1,22:23:66.22:922,66,0	1/1:1,26:27:75.24:1050,75,0	1/1:0,13:13:39.13:546,39,0
chr10	22089275	.	C	CG	7064.70	PASS	AB=0.855;AC=54;AF=0.964;AN=56;BaseQRankSum=-0.230;DP=523;FS=3.645;HRun=1;HaplotypeScore=260.3983;InbreedingCoeff=0.0918;MQ=45.30;MQ0=2;MQRankSum=-1.222;QD=13.51;ReadPosRankSum=3.477;VQSLOD=4.6826;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,18:19:30.25:212,30,0	1/1:0,9:9:17.72:128,18,0	0/1:6,2:5:39.19:39,0,41	0/1:18,2:13:38.19:131,0,38	1/1:1,10:11:1.36:2,1,0	1/1:5,14:19:34.43:235,34,0	1/1:1,21:22:33.05:249,33,0	1/1:3,6:8:14.85:116,15,0	1/1:3,32:35:80.69:718,81,0	1/1:3,19:22:62.54:501,63,0	1/1:2,9:11:6.46:65,6,0	1/1:0,26:26:56.24:434,56,0	1/1:3,22:25:41.36:343,41,0	1/1:2,31:33:37.91:262,38,0	1/1:2,26:28:50.30:448,50,0	1/1:4,22:26:50.60:401,51,0	1/1:4,26:30:61.28:506,61,0	1/1:2,18:20:49.84:380,50,0	1/1:3,10:13:35.67:290,36,0	1/1:0,8:8:10.89:92,11,0	1/1:3,21:23:15.90:147,16,0	1/1:2,14:16:13.51:119,14,0	1/1:0,10:10:5.53:58,6,0	1/1:2,18:20:14.35:128,14,0	1/1:1,11:12:14.55:89,15,0	1/1:2,11:13:38.36:326,38,0	1/1:1,21:22:44.77:373,45,0	1/1:0,12:12:31.93:273,32,0
chr10	22089277	.	G	GT	2806.23	PASS	AB=0.750;AC=52;AF=0.929;AN=56;BaseQRankSum=3.908;DP=502;FS=17.753;HRun=0;HaplotypeScore=268.1577;InbreedingCoeff=0.2742;MQ=43.45;MQ0=2;MQRankSum=-1.529;QD=5.59;ReadPosRankSum=4.785;VQSLOD=2.0556;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,18:18:5.08:80,5,0	1/1:0,9:9:16:74,16,0	0/1:10,0:5:6.32:6,0,54	0/1:16,0:10:3.49:3,0,76	1/1:4,7:11:1.36:2,1,0	1/1:3,14:17:20.52:71,21,0	1/1:1,21:22:26.56:98,27,0	1/1:1,6:7:13.57:66,14,0	1/1:4,30:34:55.47:276,55,0	1/1:2,19:21:40.48:179,40,0	1/1:1,9:10:3.45:25,3,0	1/1:1,25:26:40.98:179,41,0	1/1:2,22:24:27.24:106,27,0	1/1:1,31:32:20.22:80,20,0	1/1:3,24:27:34.88:195,35,0	1/1:1,22:23:36.24:189,36,0	1/1:3,26:29:48.78:250,49,0	1/1:2,18:20:46.92:239,47,0	1/1:3,9:12:31.11:174,31,0	1/1:0,8:8:8.79:46,9,0	1/1:1,20:20:12.39:96,12,0	0/1:2,12:15:0.38:0,0,8	1/1:3,6:10:3.52:14,4,0	1/1:2,18:20:4.32:27,4,0	0/1:1,11:12:3.81:16,0,4	1/1:1,11:12:23.02:105,23,0	1/1:1,21:23:26.67:168,27,0	1/1:0,12:12:26.56:152,27,0
chr10	22089280	.	GC	G	4573	PASS	AB=0.775;AC=53;AF=0.946;AN=56;BaseQRankSum=-0.345;DP=496;FS=9.531;HRun=1;HaplotypeScore=259.8189;InbreedingCoeff=0.1131;MQ=42.90;MQ0=2;MQRankSum=0.191;QD=9.22;ReadPosRankSum=1.648;VQSLOD=1.7655;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,18:18:28.64:181,29,0	1/1:0,9:9:19.79:106,20,0	0/1:14,1:6:29.21:29,0,73	0/1:16,3:11:61.55:62,0,75	0/1:1,10:11:0:0,0,0	1/1:1,14:15:30.90:164,31,0	1/1:0,21:21:30.94:136,31,0	1/1:0,6:6:14.36:87,14,0	1/1:1,32:33:72.82:443,73,0	1/1:1,19:20:53.41:287,53,0	1/1:0,9:9:3.32:21,3,0	1/1:0,26:26:56.03:289,56,0	1/1:1,22:23:38.13:181,38,0	1/1:0,31:32:36.29:206,36,0	1/1:1,25:26:38.56:214,39,0	1/1:0,22:22:47.75:256,48,0	1/1:2,26:28:61.24:319,61,0	1/1:2,18:20:48.94:276,49,0	1/1:0,11:11:32.03:196,32,0	1/1:0,8:8:11.38:64,11,0	1/1:1,21:21:14.96:137,15,0	1/1:0,14:14:13.63:108,14,0	1/1:1,9:10:5.21:28,5,0	1/1:0,18:18:11.04:69,11,0	1/1:1,11:12:11.06:52,11,0	1/1:0,11:11:30.26:144,30,0	1/1:3,22:25:48.47:347,48,0	1/1:0,12:12:33.93:173,34,0
chr10	22089295	.	TAG	T	2611.07	PASS	AB=0.865;AC=19;AF=0.339;AN=56;BaseQRankSum=-5.207;DP=600;FS=50.817;HRun=0;HaplotypeScore=291.5840;InbreedingCoeff=0.3485;MQ=38.32;MQ0=7;MQRankSum=-0.007;QD=9.26;ReadPosRankSum=-0.394;VQSLOD=1.2296;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:16,0:16:30.13:30,0,38	1/1:5,6:11:18.04:205,18,0	0/0:24,0:6:2.71:0,3,146	0/0:23,0:9:9.25:0,9,193	0/1:23,0:23:17.56:27,0,18	0/0:24,0:24:19.92:0,20,131	0/0:23,0:24:14.12:0,14,93	1/1:8,12:21:35.27:490,35,0	1/1:11,24:37:71.16:775,71,0	0/1:30,0:30:26.12:26,0,202	0/0:16,0:16:4.47:0,4,14	0/0:26,0:26:34.71:0,35,225	0/0:25,0:25:33.36:0,33,246	0/0:35,0:35:41.81:0,42,291	1/1:4,17:21:27.78:302,28,0	0/1:22,0:22:7.87:8,0,142	0/1:17,9:26:11.45:157,0,11	1/1:12,5:17:19.01:213,19,0	1/1:7,7:14:23.38:283,23,0	0/1:4,10:14:19.32:179,0,19	0/1:19,11:28:27.32:102,0,27	0/0:20,0:20:12.46:0,12,76	0/0:12,0:12:6.81:0,7,50	0/0:13,0:13:2.67:0,3,21	0/0:20,0:20:30.43:0,30,189	0/0:13,0:13:18.11:0,18,171	0/0:29,0:29:36.65:0,37,318	0/0:13,0:13:2.56:0,3,125
chr10	22089297	.	G	GCACA	7483.04	PASS	AB=0.833;AC=34;AF=0.607;AN=56;BaseQRankSum=-5.374;DP=678;FS=6.848;HRun=0;HaplotypeScore=308.9633;InbreedingCoeff=0.6891;MQ=38.59;MQ0=7;MQRankSum=-0.114;QD=16.41;ReadPosRankSum=-0.571;VQSLOD=3.1223;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:20:5.55:111,6,0	0/0:12,0:12:3.15:0,3,119	0/0:26,0:6:3.48:0,3,51	0/1:24,0:9:1.58:2,0,120	1/1:15,11:29:3.14:129,3,0	1/1:12,13:26:20.44:455,20,0	1/1:12,14:31:20:509,20,0	0/0:23,0:23:21.77:0,22,274	0/0:37,0:37:58.95:0,59,514	1/1:21,12:34:56.88:1223,57,0	1/1:9,7:17:2.55:73,3,0	1/1:17,18:37:35.91:814,36,0	1/1:14,14:31:38.24:833,38,0	1/1:11,22:36:44.90:986,45,0	0/0:21,0:21:24.02:0,24,224	1/1:14,13:28:35.90:760,36,0	0/0:26,0:26:14.84:0,15,151	0/0:17,0:17:18:0,18,161	0/0:15,0:14:5.72:0,6,128	0/0:15,0:15:17.70:0,18,189	0/0:30,0:28:11.46:0,11,132	1/1:11,9:22:11.31:233,11,0	1/1:14,4:19:4.28:135,4,0	1/1:7,8:15:2.56:73,3,0	1/1:11,13:26:35.49:805,35,0	0/1:8,0:16:18.64:112,0,19	1/1:15,0:30:19.25:145,19,0	1/1:7,0:14:16.53:85,17,0
chr10	22089365	.	T	TTCACA	6887.42	PASS	AB=0.611;AC=27;AF=0.482;AN=56;BaseQRankSum=-0.492;DP=868;FS=0.375;HRun=0;HaplotypeScore=264.9730;InbreedingCoeff=-0.7493;MQ=48.24;MQ0=18;MQRankSum=-0.512;QD=8.94;ReadPosRankSum=11.361;VQSLOD=2.0706;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:10,0:38:53.84:167,0,54	0/1:6,0:12:38.38:171,0,38	0/0:41,0:13:11.18:0,11,289	0/0:55,0:22:30.44:0,30,661	0/1:8,0:28:3.90:348,0,4	0/1:19,0:28:99:233,0,150	0/1:21,0:25:84.06:182,0,84	0/1:32,0:35:76.71:77,0,716	0/1:13,0:46:54.66:738,0,55	0/1:11,0:39:99:517,0,324	0/1:5,0:16:27.26:97,0,27	0/1:9,0:41:99:376,0,103	0/1:6,0:27:9.46:228,0,9	0/1:19,0:27:59.41:214,0,59	0/1:6,0:39:24.41:502,0,24	0/1:5,0:38:37.19:467,0,37	0/1:5,0:33:43.72:463,0,44	0/1:5,0:30:99:392,0,187	0/1:7,0:16:99:193,0,193	0/1:4,0:24:3.02:322,0,3	0/1:8,0:56:79.78:540,0,80	0/1:4,0:18:62.83:96,0,63	0/1:4,0:26:21.25:166,0,21	1/1:4,1:23:6.49:70,6,0	0/1:9,0:29:34.23:125,0,34	0/1:6,0:32:99:134,0,296	0/1:7,0:26:14.74:15,0,210	0/1:3,0:12:55.77:56,0,58
chr10	22090204	.	C	CAA	11778.35	PASS	AB=0.550;AC=33;AF=0.589;AN=56;BaseQRankSum=10.381;DP=593;FS=1.533;HRun=8;HaplotypeScore=94.8688;InbreedingCoeff=0.9169;MQ=86.42;MQ0=0;MQRankSum=-3.526;QD=31.16;ReadPosRankSum=3.876;VQSLOD=4.9901;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,18:21:54.14:829,54,0	0/0:4,0:4:12.03:0,12,134	0/0:24,0:24:42.89:0,43,496	0/0:23,0:24:40.72:0,41,457	1/1:6,27:34:77.71:1171,78,0	1/1:1,16:17:45.11:686,45,0	1/1:1,16:18:38.62:580,39,0	0/0:38,0:39:95.96:0,96,1035	0/0:14,0:14:33.05:0,33,358	1/1:9,18:28:57.17:861,57,0	1/1:2,26:30:75.26:1190,75,0	1/1:1,12:13:33.11:524,33,0	1/1:5,17:23:50.58:716,51,0	1/1:4,10:14:30.10:476,30,0	0/0:27,0:27:75.20:0,75,836	1/1:2,19:22:60.20:933,60,0	0/0:24,0:24:63.11:0,63,689	0/0:4,0:4:12.03:0,12,134	0/0:21,0:21:54.08:0,54,573	0/0:26,0:26:66.15:0,66,735	0/0:8,0:8:24.06:0,24,268	1/1:2,17:19:45.07:659,45,0	1/1:6,10:17:39.04:535,39,0	1/1:2,18:21:50.63:734,51,0	1/1:5,33:39:90.30:1406,90,0	1/1:5,2:30:58.72:280,59,0	1/1:1,0:21:44.92:154,45,0	0/1:2,0:11:40.90:43,0,41
chr10	22090426	.	CGT	C	11885.85	PASS	AB=0.941;AC=38;AF=0.679;AN=56;BaseQRankSum=18.199;DP=796;FS=0.322;HRun=0;HaplotypeScore=137.1651;InbreedingCoeff=0.6519;MQ=56.55;MQ0=5;MQRankSum=6.120;QD=20.78;ReadPosRankSum=3.231;VQSLOD=4.9094;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:55,0:54:99:1365,114,0	0/1:14,0:14:91.48:91,0,389	0/0:31,1:15:18.05:0,18,265	0/0:29,0:17:21.07:0,21,337	1/1:26,0:26:47.98:560,48,0	1/1:22,0:22:48.63:544,49,0	1/1:36,0:36:68.79:806,69,0	0/0:30,2:32:0.46:0,0,771	0/1:23,0:23:3.36:3,0,703	1/1:30,0:30:72.04:832,72,0	1/1:17,0:17:39.12:472,39,0	1/1:35,0:35:84.26:1013,84,0	1/1:25,0:25:48.15:579,48,0	1/1:27,0:26:54.09:654,54,0	0/1:30,5:35:58.15:58,0,1081	1/1:18,0:18:48.13:569,48,0	0/0:31,2:33:14.52:0,15,1233	0/1:21,3:24:26.13:26,0,536	0/0:18,0:18:39.13:0,39,614	0/0:28,1:29:23.81:0,24,848	0/0:51,0:50:99:0,120,1822	1/1:22,0:22:44.97:523,45,0	1/1:28,0:28:54.15:643,54,0	1/1:37,0:37:84:979,84,0	1/1:28,0:28:51.15:610,51,0	1/1:37,0:37:69:794,69,0	1/1:23,1:24:47.98:554,48,0	1/1:9,0:9:20.73:210,21,0
chr10	22090442	.	TG	T	5528.42	PASS	AB=0.611;AC=24;AF=0.429;AN=56;BaseQRankSum=20.850;DP=792;FS=12.653;HRun=1;HaplotypeScore=150.1920;InbreedingCoeff=0.3488;MQ=56.44;MQ0=6;MQRankSum=0.739;QD=11.79;ReadPosRankSum=10.344;VQSLOD=1.0887;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:24,32:56:38.29:607,0,38	0/0:14,1:15:21.05:0,21,518	0/0:29,0:14:39.12:0,39,544	0/0:30,0:19:51.03:0,51,703	0/1:9,18:27:41.65:240,0,42	0/1:12,15:27:34.65:274,0,35	0/1:14,23:37:17.39:416,0,17	0/0:35,0:35:97.52:0,98,1380	0/0:25,0:25:73.34:0,73,1050	1/1:11,17:29:22.04:422,22,0	0/1:5,13:18:2.59:216,0,3	1/1:10,25:35:0.66:467,1,0	0/1:9,14:24:50.21:256,0,50	0/1:6,18:24:0.03:308,0,0	0/0:37,0:37:92.28:0,92,1357	0/1:14,11:25:56.66:258,0,57	0/0:32,0:32:89.43:0,89,1385	0/0:20,0:20:53.66:0,54,772	0/0:23,0:23:69.22:0,69,993	0/0:26,0:26:73.45:0,73,1076	0/0:51,0:49:99:0,138,2111	1/1:4,13:18:47.74:315,48,0	1/1:5,21:26:27.79:318,28,0	1/1:12,27:39:17.59:465,18,0	1/1:5,20:25:11.14:297,11,0	0/1:10,18:29:0.47:378,0,0	0/1:4,16:21:5.11:195,0,5	1/1:0,5:7:15.63:96,16,0
chr10	22090444	.	TG	T	6199.11	PASS	AB=0.636;AC=28;AF=0.500;AN=56;BaseQRankSum=21.028;DP=796;FS=23.533;HRun=1;HaplotypeScore=148.5196;InbreedingCoeff=0.5657;MQ=56.63;MQ0=6;MQRankSum=1.558;QD=13.05;ReadPosRankSum=7.955;VQSLOD=1.9960;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:26,32:57:2.43:695,0,2	0/0:13,1:14:19.51:0,20,507	0/0:30,0:15:42.14:0,42,589	0/0:30,0:19:53.98:0,54,744	0/1:11,18:29:19.82:311,0,20	0/1:9,15:25:45.76:273,0,46	0/1:14,23:37:2.31:427,0,2	0/0:35,0:35:98.25:0,98,1389	0/0:24,0:24:71.20:0,71,1039	1/1:14,17:31:46.75:496,47,0	1/1:6,13:19:9.60:263,10,0	1/1:11,25:36:16.49:500,16,0	0/1:11,14:25:33.62:292,0,34	1/1:8,18:25:2.23:309,2,0	0/0:35,0:35:95.44:0,95,1376	0/1:13,11:24:45.54:233,0,46	0/0:32,0:32:91.15:0,91,1383	0/0:21,0:21:55.16:0,55,765	0/0:22,0:22:66.21:0,66,965	0/0:26,0:26:74.26:0,74,1094	0/0:52,0:50:99:0,141,2202	1/1:5,13:18:52.79:353,53,0	1/1:6,21:27:46.37:426,46,0	1/1:10,27:38:26.30:469,26,0	1/1:6,20:26:28.89:389,29,0	1/1:10,18:28:11.75:402,12,0	1/1:5,16:21:4.91:233,5,0	1/1:2,5:7:20.48:127,20,0
chr10	22091625	.	A	AT	1011.85	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-0.757;DP=407;FS=2.211;HRun=10;HaplotypeScore=50.1056;InbreedingCoeff=0.7432;MQ=80.30;MQ0=0;MQRankSum=0.095;QD=22.00;ReadPosRankSum=0.284;VQSLOD=4.4742;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,18:20:45.11:480,45,0	0/0:9,0:9:26.97:0,27,222	0/0:17,1:14:0.36:0,0,104	0/0:15,0:11:21.04:0,21,139	1/1:4,22:26:44.43:653,44,0	0/0:20,0:20:50.90:0,51,415	0/0:11,0:11:26.95:0,27,222	0/0:30,0:30:57.76:0,58,468	0/0:18,0:18:50.84:0,51,403	0/0:15,0:15:41.95:0,42,345	0/0:19,0:20:43.96:0,44,348	0/0:7,0:7:17.96:0,18,145	0/0:14,0:14:32.95:0,33,269	0/0:10,0:10:29.96:0,30,246	0/0:19,0:19:50.88:0,51,410	0/0:9,0:9:26.96:0,27,219	0/0:19,0:19:47.91:0,48,388	0/0:7,0:7:20.98:0,21,172	0/0:20,0:20:47.91:0,48,391	0/0:13,0:13:11.81:0,12,247	0/0:15,0:15:38.84:0,39,306	0/0:5,0:5:14.98:0,15,123	0/0:11,0:11:2.82:0,3,173	0/0:12,0:12:26.94:0,27,218	0/0:6,1:7:12.23:0,12,119	0/0:20,0:20:50.91:0,51,417	0/0:14,0:15:40.98:0,41,323	0/0:2,0:2:5.99:0,6,49
chr10	22092484	.	T	TA	13072.76	PASS	AB=0.522;AC=31;AF=0.554;AN=56;BaseQRankSum=-3.535;DP=592;FS=4.663;HRun=1;HaplotypeScore=69.2717;InbreedingCoeff=0.9337;MQ=85.67;MQ0=0;MQRankSum=-1.571;QD=39.14;ReadPosRankSum=2.577;VQSLOD=5.6749;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:72.23:0,72,933	0/0:12,0:12:36.10:0,36,453	0/0:23,0:23:46.88:0,47,577	0/0:16,0:16:34.23:0,34,444	1/1:0,36:36:99:1521,108,0	1/1:0,24:24:57.19:843,57,0	1/1:0,13:13:33.11:488,33,0	0/0:35,0:35:99:0,99,1229	0/0:14,0:14:42.13:0,42,532	1/1:0,31:31:93.29:1347,93,0	1/1:1,27:28:84.04:1161,84,0	1/1:1,13:14:36.12:533,36,0	1/1:0,15:15:36.12:530,36,0	1/1:1,25:26:72.24:1051,72,0	0/0:20,0:20:60.10:0,60,719	0/1:1,11:12:8.82:369,0,9	0/0:30,0:30:90.22:0,90,1095	0/0:12,0:12:36.10:0,36,452	0/0:24,0:24:66.17:0,66,825	0/0:34,0:34:99:0,102,1265	0/0:14,0:14:39.13:0,39,505	1/1:1,19:20:48.16:710,48,0	1/1:0,17:17:51.17:755,51,0	1/1:1,20:21:54.18:799,54,0	1/1:0,25:25:60.20:888,60,0	1/1:1,22:23:66.20:938,66,0	1/1:0,23:24:63.21:917,63,0	1/1:0,5:5:15.05:222,15,0
chr10	22092972	.	TC	T	11579.69	PASS	AB=1.000;AC=33;AF=0.589;AN=56;BaseQRankSum=-7.861;DP=552;FS=5.608;HRun=1;HaplotypeScore=80.4846;InbreedingCoeff=0.9200;MQ=74.38;MQ0=0;MQRankSum=-1.576;QD=32.99;ReadPosRankSum=3.595;VQSLOD=4.5506;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:28:10.05:10,0,152	0/0:7,0:7:17.93:0,18,158	0/0:12,0:12:33.03:0,33,422	0/0:10,0:10:7.62:0,8,207	1/1:0,31:31:84.20:1126,84,0	1/1:0,22:22:63.21:872,63,0	1/1:1,16:16:39.13:540,39,0	0/0:39,0:39:88.06:0,88,988	0/0:19,0:19:48.01:0,48,428	1/1:0,24:24:72.21:963,72,0	1/1:0,17:17:45.06:600,45,0	1/1:5,14:19:54.12:679,54,0	1/1:0,13:13:36.12:497,36,0	1/1:0,27:27:69.23:954,69,0	0/0:20,0:20:57.01:0,57,510	1/1:0,17:17:39.13:540,39,0	0/0:20,0:20:50.94:0,51,445	0/0:22,0:22:53.99:0,54,483	0/0:19,0:19:57.03:0,57,513	0/0:23,0:23:62.95:0,63,555	0/0:10,0:10:30.01:0,30,269	1/1:0,14:14:39.13:538,39,0	1/1:1,15:16:23.07:377,23,0	1/1:4,8:12:33.06:403,33,0	1/1:0,23:23:60.20:825,60,0	1/1:0,27:27:81.15:1015,81,0	1/1:0,35:35:93.30:1271,93,0	1/1:0,9:9:27.09:370,27,0
chr10	22092973	.	C	CA	4360.55	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-16.211;DP=564;FS=2.687;HRun=9;HaplotypeScore=111.2842;InbreedingCoeff=0.9862;MQ=74.66;MQ0=0;MQRankSum=-0.712;QD=23.96;ReadPosRankSum=-1.813;VQSLOD=3.7086;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:48.10:0,48,382	1/1:2,6:8:18:185,18,0	0/0:12,0:12:23.21:0,23,217	0/0:11,0:11:9.51:0,10,81	0/0:32,0:32:62.70:0,63,205	0/0:22,0:22:46.62:0,47,145	0/0:17,0:16:28.75:0,29,89	1/1:10,28:38:52.50:804,52,0	1/1:1,16:17:39.11:431,39,0	0/0:24,0:24:49:0,49,152	0/0:17,0:17:31.06:0,31,97	0/0:20,0:20:31.07:0,31,96	0/0:14,0:14:26.63:0,27,82	0/0:27,0:27:51.06:0,51,158	1/1:2,19:21:54.15:597,54,0	0/0:18,0:18:28.85:0,29,89	1/1:4,16:21:41.95:443,42,0	1/1:4,19:23:48.10:519,48,0	1/1:3,14:18:44.95:479,45,0	1/1:5,21:26:60.08:637,60,0	1/1:2,8:10:24.06:266,24,0	0/0:14,0:14:28.68:0,29,89	0/0:16,0:16:19.95:0,20,62	0/0:12,0:12:17.76:0,18,55	0/0:24,0:24:44.03:0,44,137	0/0:27,0:27:55.49:0,55,205	0/0:37,0:37:68.62:0,69,212	0/0:9,0:9:19.98:0,20,61
chr10	22093163	.	C	CAACAA	804.46	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=1.584;DP=647;FS=3.698;HRun=0;HaplotypeScore=221.4886;InbreedingCoeff=0.6022;MQ=66.17;MQ0=2;MQRankSum=-4.352;QD=15.77;ReadPosRankSum=-5.579;VQSLOD=2.2792;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:5,22:32:17.12:884,17,0	0/0:10,0:10:24.07:0,24,299	0/0:22,0:16:18.31:0,18,610	0/0:21,0:17:15.36:0,15,542	0/0:41,0:41:78.43:0,78,1127	0/0:22,0:22:60.11:0,60,724	0/0:14,0:13:22.60:0,23,339	0/0:32,0:32:86.97:0,87,989	0/0:13,0:13:29.88:0,30,341	0/0:19,0:19:38.99:0,39,573	0/0:19,0:19:27.58:0,28,572	0/0:18,0:18:26.55:0,27,531	0/0:14,0:14:26.22:0,26,379	0/1:19,0:19:22.61:23,0,305	0/0:26,0:26:68.61:0,69,689	0/0:17,0:17:9.32:0,9,380	0/0:42,0:40:63.37:0,63,890	0/0:21,0:21:45.05:0,45,546	0/0:34,0:32:77.98:0,78,956	0/0:20,0:20:47.31:0,47,513	0/0:21,0:21:47.98:0,48,530	0/0:18,0:18:29.68:0,30,444	0/0:22,0:22:44.99:0,45,620	0/0:25,0:25:38.68:0,39,704	0/0:34,0:34:80.76:0,81,1062	0/0:28,0:28:62.94:0,63,855	0/0:25,0:25:57.12:0,57,933	0/0:18,0:17:41.79:0,42,434
chr10	22093166	.	AAC	A	9094.29	PASS	AB=0.983;AC=32;AF=0.571;AN=56;BaseQRankSum=-5.093;DP=631;FS=1.028;HRun=0;HaplotypeScore=147.4583;InbreedingCoeff=0.5252;MQ=64.38;MQ0=2;MQRankSum=-0.989;QD=20.39;ReadPosRankSum=-1.972;VQSLOD=4.7058;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:28:33.14:42,0,33	0/0:10,0:10:23.95:0,24,190	0/0:21,0:15:34.87:0,35,508	0/0:19,0:15:32.80:0,33,408	1/1:40,0:40:99:1125,108,0	1/1:23,0:23:62.90:638,63,0	1/1:14,0:13:39.09:435,39,0	0/1:30,0:30:99:151,0,448	0/0:12,0:12:26.97:0,27,259	1/1:21,0:21:56.99:645,57,0	1/1:20,0:20:56.34:657,56,0	1/1:16,1:17:51.08:558,51,0	1/1:14,0:14:42.10:461,42,0	1/1:19,0:19:54.06:590,54,0	0/1:23,3:26:99:133,0,418	1/1:16,0:16:48.07:510,48,0	0/0:39,2:39:89.52:0,90,693	0/0:21,0:21:17.04:0,17,321	0/1:35,0:33:99:185,0,529	0/1:21,0:21:99:107,0,349	0/0:20,0:20:19.20:0,19,253	1/1:17,0:17:47.79:440,48,0	1/1:21,0:21:59.89:626,60,0	1/1:23,1:24:60.16:682,60,0	1/1:32,0:32:93.20:1062,93,0	0/1:28,0:28:47.34:47,0,164	0/0:25,0:25:11.78:0,12,275	0/0:16,0:15:2.18:0,2,124
chr10	22093167	.	AC	A	8489.26	PASS	AB=0.974;AC=38;AF=0.679;AN=56;BaseQRankSum=-2.922;DP=628;FS=0.332;HRun=1;HaplotypeScore=139.0802;InbreedingCoeff=0.4614;MQ=63.78;MQ0=2;MQRankSum=-1.669;QD=16.78;ReadPosRankSum=-2.195;VQSLOD=4.3053;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:28:4.32:160,4,0	0/0:10,0:10:22.46:0,22,122	0/0:20,0:14:22.39:0,22,374	0/0:18,1:15:31.35:0,31,331	1/1:9,29:38:99:1001,108,0	1/1:6,15:21:60.29:584,60,0	1/1:3,11:13:39.06:395,39,0	0/1:30,1:31:55.77:56,0,281	0/0:12,0:12:25.33:0,25,163	1/1:0,21:21:56.99:541,57,0	1/1:0,20:20:56.81:500,57,0	1/1:3,14:17:51.02:499,51,0	1/1:7,8:15:42.04:413,42,0	1/1:6,13:19:53.88:520,54,0	0/1:27,0:27:83.60:84,0,239	1/1:6,11:17:50.99:500,51,0	0/0:39,0:37:78.91:0,79,365	0/0:22,0:22:28.54:0,29,222	0/1:35,0:33:34.47:34,0,350	0/1:21,0:21:52.12:52,0,207	0/1:19,2:21:43.52:44,0,128	1/1:0,17:17:47.52:403,48,0	1/1:9,11:20:59.81:581,60,0	1/1:7,17:24:60.12:627,60,0	1/1:5,27:32:93.12:954,93,0	1/1:28,0:28:28.98:305,29,0	0/1:24,1:25:32.21:120,0,32	1/1:15,0:14:1.47:116,1,0
chr10	22093174	.	AAAC	A	9170.03	PASS	AB=1.000;AC=27;AF=0.482;AN=56;BaseQRankSum=-4.368;DP=638;FS=0.000;HRun=0;HaplotypeScore=161.2557;InbreedingCoeff=0.9484;MQ=66.76;MQ0=2;MQRankSum=-1.616;QD=29.49;ReadPosRankSum=4.601;VQSLOD=4.9648;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:59.93:0,60,728	0/0:8,0:8:18.06:0,18,301	0/0:22,0:18:49.68:0,50,865	0/0:17,0:14:36.55:0,37,587	1/1:38,1:39:96.17:1459,96,0	1/1:18,1:19:53.88:751,54,0	1/1:14,0:13:37.92:527,38,0	0/0:34,0:34:93.70:0,94,1192	0/0:11,0:11:24.03:0,24,348	1/1:20,0:20:11.22:147,11,0	1/1:20,0:20:26.67:146,27,0	1/1:21,0:21:56.98:757,57,0	1/1:14,0:14:24.16:501,24,0	1/1:22,0:22:56.23:785,56,0	0/0:27,0:27:77.99:0,78,1074	1/1:17,1:18:46.84:630,47,0	0/0:40,0:38:90.24:0,90,1411	0/0:19,0:19:36.11:0,36,554	0/0:35,0:33:90:0,90,1136	0/0:22,0:22:56.58:0,57,597	0/0:25,0:25:51.13:0,51,767	1/1:16,0:16:42.10:604,42,0	1/1:22,0:22:54.46:765,54,0	1/1:27,0:27:63.11:931,63,0	1/1:30,1:31:80.93:1165,81,0	0/1:28,0:28:2.21:2,0,532	0/0:26,0:26:62.41:0,62,707	0/0:14,0:13:38.96:0,39,354
chr10	22093175	.	AAC	A	7540.19	PASS	AB=1.000;AC=27;AF=0.482;AN=56;BaseQRankSum=0.553;DP=632;FS=1.001;HRun=0;HaplotypeScore=153.3953;InbreedingCoeff=0.9117;MQ=67.88;MQ0=2;MQRankSum=-0.292;QD=24.32;ReadPosRankSum=4.295;VQSLOD=5.6937;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:59.87:0,60,619	0/0:9,0:9:21.05:0,21,241	0/0:23,0:19:53.91:0,54,810	0/0:18,0:15:42.13:0,42,527	1/1:14,26:40:99:1006,102,0	1/1:5,14:19:53.56:506,54,0	1/1:5,9:13:39.07:402,39,0	0/0:34,0:34:75.60:0,76,788	0/0:13,0:13:29.97:0,30,307	1/1:18,1:19:45.42:524,45,0	1/1:20,0:20:51.47:612,51,0	1/1:11,11:22:60.48:601,60,0	1/1:6,8:14:27.85:359,28,0	1/1:12,10:22:59.90:585,60,0	0/0:27,0:27:60.66:0,61,731	1/1:8,10:18:47.96:464,48,0	0/0:38,0:36:90.21:0,90,1059	0/0:19,0:19:35.82:0,36,381	0/0:35,0:33:65.92:0,66,744	0/0:20,0:20:5.25:0,5,324	0/0:26,0:26:54.07:0,54,597	1/1:0,15:15:41.28:345,41,0	1/1:10,11:21:53.93:562,54,0	1/1:11,16:27:63.03:627,63,0	1/1:8,23:31:87.17:929,87,0	0/1:28,0:28:19.90:20,0,243	0/0:26,0:26:57.61:0,58,443	0/0:9,0:8:23.92:0,24,185
chr10	22093176	.	AC	A	6597.54	PASS	AB=1.000;AC=28;AF=0.500;AN=56;BaseQRankSum=4.480;DP=615;FS=1.789;HRun=2;HaplotypeScore=143.6547;InbreedingCoeff=0.8261;MQ=69.84;MQ0=2;MQRankSum=0.530;QD=19.87;ReadPosRankSum=2.802;VQSLOD=5.0465;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:56.49:0,56,473	0/0:9,0:9:20.89:0,21,157	0/0:24,0:20:42.55:0,43,626	0/0:18,0:15:40.98:0,41,413	1/1:39,2:41:99:898,114,0	1/1:20,0:20:56.66:462,57,0	1/1:13,1:13:38.96:341,39,0	0/0:32,0:32:86.18:0,86,643	0/0:12,0:12:23.71:0,24,181	1/1:6,12:18:44.91:396,45,0	1/1:4,14:18:53.67:440,54,0	1/1:20,3:23:64.41:542,64,0	1/1:14,0:14:35.88:300,36,0	1/1:19,3:22:59.31:490,59,0	0/0:27,0:27:74.74:0,75,547	1/1:18,0:18:48.95:412,49,0	0/0:38,0:36:89.53:0,90,678	0/0:17,0:17:32.75:0,33,239	0/0:32,0:31:78.81:0,79,576	0/0:19,0:19:4.50:0,5,224	0/0:25,0:25:49.83:0,50,388	1/1:15,0:15:40.03:288,40,0	1/1:22,0:22:56.45:512,56,0	1/1:26,1:27:62.88:545,63,0	1/1:28,3:31:86.90:771,87,0	0/1:23,0:23:41.46:139,0,41	0/1:26,0:26:63.33:63,0,128	0/0:5,0:5:7.21:0,7,24
chr10	22093846	.	ACG	A	28357.29	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=2.009;DP=673;FS=14.697;HRun=0;HaplotypeScore=87.3489;InbreedingCoeff=0.9948;MQ=79.02;MQ0=0;MQRankSum=-9.810;QD=44.52;ReadPosRankSum=5.947;VQSLOD=5.5190;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,48:48:99:2007,123,0	1/1:0,14:14:42.14:685,42,0	0/0:27,0:27:77.91:0,78,1459	0/0:9,0:9:24.08:0,24,485	1/1:0,18:18:51.17:832,51,0	1/1:0,17:17:45.15:734,45,0	1/1:0,28:28:78.22:1234,78,0	1/1:0,27:27:78.26:1250,78,0	1/1:0,22:22:66.23:1068,66,0	1/1:0,29:29:87.30:1416,87,0	1/1:0,17:17:48.16:773,48,0	1/1:0,23:23:60.16:949,60,0	1/1:0,25:25:69.24:1124,69,0	1/1:0,31:31:87.30:1417,87,0	1/1:0,31:31:90.31:1467,90,0	1/1:1,23:24:60.20:976,60,0	1/1:0,32:32:81.28:1322,81,0	1/1:0,27:27:72.25:1175,72,0	1/1:0,24:24:72.21:1120,72,0	1/1:0,16:16:42.14:685,42,0	1/1:0,39:39:99:1812,111,0	1/1:0,23:23:63.22:1028,63,0	1/1:0,27:27:75.26:1224,75,0	1/1:0,24:24:57.19:930,57,0	1/1:0,21:21:48.12:754,48,0	1/1:0,26:26:78.25:1248,78,0	1/1:0,18:18:51.17:831,51,0	1/1:0,6:6:18.06:294,18,0
chr10	22094093	.	GAA	G	13530.87	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-4.197;DP=654;FS=0.000;HRun=12;HaplotypeScore=99.5092;InbreedingCoeff=0.9642;MQ=74.43;MQ0=3;MQRankSum=-5.060;QD=22.22;ReadPosRankSum=5.566;VQSLOD=4.4092;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,1:36:62.72:304,63,0	1/1:0,13:13:30.06:305,30,0	0/0:24,0:20:44.33:0,44,552	0/0:20,0:17:18.23:0,18,223	1/1:7,23:30:65.83:663,66,0	1/1:5,21:26:48.07:488,48,0	1/1:0,21:22:53.86:531,54,0	1/1:3,22:26:66.08:647,66,0	1/1:3,11:15:35.81:348,36,0	1/1:5,23:28:69.05:682,69,0	1/1:5,17:23:47.80:521,48,0	1/1:2,18:20:51.10:519,51,0	1/1:5,30:35:54.40:821,54,0	1/1:5,17:22:39.06:397,39,0	1/1:3,25:27:57.11:580,57,0	1/1:2,26:28:69.15:701,69,0	1/1:0,12:13:35.82:347,36,0	1/1:5,24:30:62.86:693,63,0	1/1:6,12:19:38.99:373,39,0	1/1:2,24:26:66.12:671,66,0	1/1:0,20:21:50.85:571,51,0	1/1:6,25:31:71.87:713,72,0	1/1:2,28:28:66.15:671,66,0	1/1:2,18:20:48.08:488,48,0	1/1:5,15:23:26.64:335,27,0	1/1:2,19:22:50.83:570,51,0	1/1:1,18:19:51.11:518,51,0	1/1:0,2:3:8.76:73,9,0
chr10	22094534	.	A	AG	1179.17	PASS	AB=1.000;AC=12;AF=0.214;AN=56;BaseQRankSum=-10.593;DP=585;FS=15.392;HRun=1;HaplotypeScore=131.8963;InbreedingCoeff=-0.0499;MQ=82.11;MQ0=1;MQRankSum=-1.074;QD=4.85;ReadPosRankSum=1.330;VQSLOD=-0.7608;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,15:16:42.14:626,42,0	0/1:16,0:16:15.37:56,0,15	0/0:32,0:31:45.52:0,46,641	0/0:30,0:26:53.50:0,54,614	0/1:31,0:31:11.47:144,0,11	0/0:23,0:23:48.34:0,48,210	0/0:14,0:14:21.46:0,21,94	0/1:27,0:27:75.31:75,0,95	0/1:12,0:12:29.24:33,0,29	0/0:13,0:13:7.17:0,7,136	0/0:19,0:19:43.75:0,44,265	0/0:20,0:20:36.88:0,37,173	0/0:13,0:13:27.62:0,28,143	0/0:17,0:17:25.86:0,26,112	0/1:36,0:36:76.53:77,0,83	0/0:20,0:19:36.72:0,37,176	0/1:32,0:32:68.81:96,0,69	0/1:21,0:21:49.91:67,0,50	0/1:15,0:15:24.94:38,0,25	0/1:31,0:31:65.32:106,0,65	0/1:6,0:6:12.02:17,0,12	0/0:23,0:23:42.71:0,43,245	0/0:17,0:17:31.99:0,32,148	0/0:19,0:19:24.30:0,24,99	0/0:33,0:33:64.18:0,64,291	0/0:29,0:29:53.08:0,53,347	0/0:15,0:15:24.91:0,25,106	0/0:3,0:3:5.09:0,5,18
chr10	22094535	.	G	GA	8832.62	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-3.459;DP=587;FS=2.113;HRun=9;HaplotypeScore=106.3761;InbreedingCoeff=0.8702;MQ=81.49;MQ0=1;MQRankSum=-5.878;QD=16.86;ReadPosRankSum=5.169;VQSLOD=4.6784;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:15:41.49:275,41,0	1/1:1,15:16:33.09:365,33,0	0/0:33,1:31:6.28:0,6,363	0/0:29,0:25:47.93:0,48,419	1/1:5,28:33:81.18:882,81,0	1/1:23,0:23:49.72:286,50,0	1/1:14,0:14:26.30:151,26,0	1/1:7,22:29:40.12:669,40,0	1/1:3,11:14:21.06:232,21,0	1/1:13,0:13:28.90:177,29,0	1/1:20,0:20:31.55:168,32,0	1/1:20,0:20:46.87:284,47,0	1/1:13,0:13:26.30:151,26,0	1/1:17,0:17:29.24:168,29,0	1/1:6,26:33:45.85:699,46,0	1/1:18,2:19:35.09:203,35,0	1/1:6,26:32:20.07:670,20,0	1/1:3,17:21:24.92:485,25,0	1/1:3,14:17:39.09:421,39,0	1/1:3,28:31:72.19:795,72,0	1/1:1,5:6:12.03:133,12,0	1/1:21,1:22:23.31:243,23,0	1/1:16,0:16:29.24:168,29,0	1/1:19,0:19:26.27:150,26,0	1/1:32,0:32:70.19:404,70,0	1/1:30,0:30:69.78:449,70,0	1/1:15,0:15:29.25:171,29,0	1/1:3,0:3:5.85:34,6,0
chr10	22094543	.	A	AAAG	12199.25	PASS	AB=1.000;AC=32;AF=0.571;AN=56;BaseQRankSum=-11.818;DP=585;FS=4.567;HRun=0;HaplotypeScore=112.4797;InbreedingCoeff=0.8082;MQ=78.64;MQ0=1;MQRankSum=-3.154;QD=37.65;ReadPosRankSum=4.311;VQSLOD=5.7564;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:28.32:0,28,265	0/1:15,0:15:8.53:9,0,41	0/0:30,0:27:16.93:0,17,685	0/0:26,0:23:44.75:0,45,625	0/0:34,0:34:56.22:0,56,198	1/1:0,19:21:51.18:1117,51,0	1/1:0,16:17:27.09:588,27,0	0/0:31,0:31:15.89:0,16,254	0/0:11,0:11:12.46:0,12,32	1/1:0,15:15:45.04:714,45,0	1/1:0,13:17:44.89:727,45,0	1/1:1,17:18:48.16:1016,48,0	1/1:0,11:12:27.09:588,27,0	1/1:0,15:17:30.10:657,30,0	0/0:34,0:34:12.31:0,12,178	1/1:2,15:18:36.12:788,36,0	0/0:32,0:32:52.96:0,53,254	0/0:21,0:21:2.17:0,2,119	0/0:19,0:19:40.82:0,41,222	0/1:30,0:30:10.51:11,0,121	0/0:6,0:6:10.27:0,10,45	1/1:3,15:21:28.12:966,28,0	1/1:0,15:17:32.91:673,33,0	1/1:2,17:19:27.09:574,27,0	1/1:0,35:36:72.25:1577,72,0	1/1:1,25:26:75.23:1457,75,0	1/1:0,16:17:30.07:605,30,0	1/1:0,7:7:6.02:131,6,0
chr10	22095221	.	C	CCA	15727.13	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-5.923;DP=452;FS=46.277;HRun=0;HaplotypeScore=68.4014;InbreedingCoeff=0.8438;MQ=68.19;MQ0=0;MQRankSum=-0.848;QD=37.62;ReadPosRankSum=5.713;VQSLOD=2.7848;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:26.27:0,26,205	1/1:1,6:7:15.03:249,15,0	0/0:9,0:9:26.80:0,27,268	0/0:10,0:10:2.30:0,2,152	1/1:3,8:12:30.08:462,30,0	1/1:1,17:19:42.13:696,42,0	1/1:1,26:29:69.23:1120,69,0	1/1:1,16:17:19.81:506,20,0	1/1:0,12:13:27.09:446,27,0	1/1:0,17:18:48.15:797,48,0	1/1:0,11:11:33.11:525,33,0	1/1:1,17:18:36.10:595,36,0	1/1:1,19:21:60.20:962,60,0	1/1:0,14:15:36.12:595,36,0	1/1:0,17:17:45.15:745,45,0	1/1:0,18:18:48.15:795,48,0	1/1:0,36:37:93.31:1521,93,0	1/1:1,3:4:12.01:170,12,0	1/1:4,18:22:57.08:821,57,0	1/1:0,9:10:21.06:308,21,0	1/1:3,27:31:46.07:748,46,0	1/1:0,8:9:20.81:310,21,0	1/1:1,8:10:17.84:254,18,0	1/1:1,22:24:59.98:993,60,0	1/1:0,11:11:33.11:540,33,0	1/1:3,21:25:60.09:923,60,0	1/1:4,4:8:2.95:49,3,0	1/1:0,12:12:36.12:596,36,0
chr10	22095345	.	CACCT	C	7685.83	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=6.020;DP=345;FS=6.194;HRun=0;HaplotypeScore=67.2819;InbreedingCoeff=0.9520;MQ=86.25;MQ0=0;MQRankSum=-5.529;QD=53.37;ReadPosRankSum=2.047;VQSLOD=5.7512;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:84.29:0,84,2333	1/1:0,7:7:21.07:419,21,0	0/0:14,0:14:38.31:0,38,828	0/0:12,0:12:1.52:0,2,591	1/1:1,8:9:24.08:479,24,0	0/0:8,0:8:24.07:0,24,613	0/0:17,0:17:45.15:0,45,1259	1/1:2,10:12:30.10:585,30,0	1/1:1,6:7:21.07:399,21,0	0/0:14,0:14:42.14:0,42,1171	0/0:13,0:13:39.13:0,39,1091	0/0:15,0:15:45.15:0,45,1227	0/0:5,0:5:15.05:0,15,420	0/0:9,0:9:24.08:0,24,667	1/1:3,8:11:27.09:530,27,0	0/0:14,0:14:39.13:0,39,1064	1/1:3,16:18:54.19:1061,54,0	1/1:0,7:7:21.07:419,21,0	1/1:1,11:12:30.09:565,30,0	1/1:2,7:9:18.06:359,18,0	1/1:1,23:24:63.22:1258,63,0	0/0:3,0:3:9.03:0,9,244	0/0:13,0:13:39.13:0,39,1091	0/0:23,0:23:66.23:0,66,1796	0/0:10,0:10:30.10:0,30,827	1/1:0,12:12:36.12:714,36,0	1/1:0,11:11:33.11:657,33,0	1/1:0,4:4:12.04:240,12,0
chr10	22095769	.	T	TA	6012.67	PASS	AB=0.600;AC=23;AF=0.411;AN=56;BaseQRankSum=-7.450;DP=594;FS=0.000;HRun=10;HaplotypeScore=71.2083;InbreedingCoeff=0.9180;MQ=76.70;MQ0=0;MQRankSum=-2.517;QD=23.21;ReadPosRankSum=1.004;VQSLOD=5.5386;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:86.85:0,87,709	0/0:12,0:12:35.88:0,36,287	0/0:15,0:15:2.04:0,2,81	0/0:17,0:19:36.32:0,36,282	0/0:20,0:20:47.92:0,48,393	1/1:3,25:28:25.91:685,26,0	1/1:4,19:23:48.19:567,48,0	0/0:33,0:33:77.86:0,78,634	0/0:15,0:15:38.93:0,39,317	1/1:3,27:30:78.20:831,78,0	1/1:3,13:16:36.09:378,36,0	1/1:6,19:25:47.23:510,47,0	1/1:1,22:23:60.15:638,60,0	1/1:5,20:25:26.49:488,26,0	0/0:17,0:17:50.91:0,51,414	1/1:2,14:16:33.08:351,33,0	0/0:29,0:29:80.88:0,81,661	0/0:16,0:16:44.95:0,45,369	0/0:17,0:17:41.92:0,42,339	0/0:29,0:30:79.86:0,80,638	0/0:20,0:20:56.92:0,57,464	1/1:2,12:14:29.97:294,30,0	1/1:7,16:23:39.06:400,39,0	0/1:4,8:12:0.56:200,0,1	1/1:2,22:24:63.16:670,63,0	0/0:34,1:35:50.23:0,50,588	0/0:21,0:21:44.92:0,45,369	0/0:4,0:4:5.99:0,6,49
chr10	22096484	.	T	TC	1605.01	PASS	AB=1.000;AC=22;AF=0.393;AN=56;BaseQRankSum=-6.596;DP=466;FS=1.849;HRun=9;HaplotypeScore=78.2881;InbreedingCoeff=0.1343;MQ=75.15;MQ0=0;MQRankSum=-0.521;QD=5.50;ReadPosRankSum=1.845;VQSLOD=0.9556;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:8:2.56:0,3,17	0/0:15,0:15:24.41:0,24,110	0/1:17,0:13:12.55:13,0,97	0/1:16,0:13:7.67:8,0,8	0/0:14,0:14:7.84:0,8,49	0/1:22,0:22:20.98:114,0,21	0/1:12,0:12:19.23:74,0,19	0/0:28,0:28:45.27:0,45,221	0/0:19,0:20:43.45:0,43,200	0/1:23,0:23:43.85:44,0,63	0/1:14,0:14:36.12:45,0,36	0/1:27,0:27:24.27:128,0,24	0/1:17,0:17:4.80:87,0,5	0/1:9,0:9:9.53:28,0,10	0/0:23,0:23:45.86:0,46,200	0/1:18,0:18:1.34:103,0,1	0/0:19,0:19:38.66:0,39,180	0/0:6,0:6:13.72:0,14,61	0/0:11,0:11:25.43:0,25,125	0/0:17,0:17:31.51:0,32,192	0/0:13,0:13:27.16:0,27,128	0/1:13,0:13:18.99:61,0,19	1/1:17,0:17:10.06:95,10,0	0/1:11,0:11:40.48:40,0,44	1/1:20,0:20:5.78:85,6,0	1/1:3,12:15:29.98:295,30,0	1/1:5,22:27:27.07:299,27,0	1/1:0,13:13:24.06:265,24,0
chr10	22096493	.	C	CA	4586.13	PASS	AB=1.000;AC=30;AF=0.536;AN=56;BaseQRankSum=-12.545;DP=475;FS=9.920;HRun=7;HaplotypeScore=77.5265;InbreedingCoeff=0.7043;MQ=70.78;MQ0=0;MQRankSum=-0.694;QD=15.87;ReadPosRankSum=1.842;VQSLOD=4.0402;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:6:2.25:0,2,22	0/0:5,0:14:21.08:0,21,68	0/1:14,0:10:7.21:7,0,85	0/1:14,0:10:5.61:6,0,8	0/0:19,0:19:52.96:0,53,415	1/1:3,15:18:39.12:462,39,0	1/1:2,12:14:21.95:251,22,0	0/0:6,0:29:46.89:0,47,159	0/0:2,0:22:31.42:0,31,103	1/1:5,21:26:60.08:627,60,0	1/1:4,9:14:23.72:257,24,0	1/1:8,17:25:45.14:534,45,0	1/1:6,14:20:32.78:380,33,0	1/1:2,9:11:15.05:178,15,0	0/0:2,0:20:35.60:0,36,127	1/1:3,18:21:36.11:427,36,0	0/0:1,0:18:26.48:0,26,80	0/0:0,0:8:10.19:0,10,31	0/0:1,0:15:29.61:0,30,103	0/0:7,0:20:24.10:0,24,87	0/0:7,0:15:21.88:0,22,75	1/1:2,9:11:24.07:284,24,0	1/1:1,19:20:12.94:434,13,0	1/1:3,9:12:15.05:178,15,0	1/1:2,16:19:36.11:428,36,0	0/1:17,0:17:17.35:17,0,55	0/1:20,0:20:17.94:48,0,18	1/1:13,0:13:19.34:69,19,0
chr10	22097353	.	TAC	T	10020.58	PASS	AB=0.969;AC=26;AF=0.464;AN=56;BaseQRankSum=13.254;DP=916;FS=8.193;HRun=0;HaplotypeScore=160.2961;InbreedingCoeff=0.8786;MQ=56.12;MQ0=9;MQRankSum=5.094;QD=22.62;ReadPosRankSum=3.246;VQSLOD=4.8384;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,1:31:66.20:0,66,1046	0/0:10,0:10:21.07:0,21,344	0/0:48,0:26:22.36:0,22,595	0/0:47,0:19:13.17:0,13,324	0/0:29,0:29:57.19:0,57,913	1/1:24,7:31:55.54:628,56,0	1/1:8,5:13:30.08:351,30,0	0/0:44,1:45:44.93:0,45,1308	0/0:42,1:43:49.84:0,50,1276	1/1:41,9:49:99:1340,117,0	1/1:30,7:37:77.98:931,78,0	1/1:35,3:38:67.44:801,67,0	1/1:34,6:40:15.52:551,16,0	1/1:41,1:42:44.47:978,44,0	0/0:49,1:50:71.19:0,71,2038	1/1:38,8:46:99:1312,113,0	0/0:10,0:10:30.10:0,30,492	0/0:11,0:11:20.63:0,21,312	0/1:14,1:15:4.12:4,0,432	0/0:28,1:29:26.03:0,26,947	0/0:47,0:47:92.97:0,93,1974	1/1:23,4:27:65.40:713,65,0	1/1:29,3:32:65.32:706,65,0	1/1:17,4:21:45.14:552,45,0	1/1:33,8:41:93.89:1146,94,0	0/0:38,0:38:33.72:0,34,1265	0/0:34,0:34:90.27:0,90,1395	0/1:10,0:10:8.13:8,0,272
chr10	22097367	.	C	CGT	6734.16	PASS	AB=0.941;AC=15;AF=0.268;AN=56;BaseQRankSum=17.981;DP=937;FS=5.275;HRun=0;HaplotypeScore=188.9639;InbreedingCoeff=0.1796;MQ=58.96;MQ0=16;MQRankSum=2.132;QD=16.03;ReadPosRankSum=5.468;VQSLOD=4.0396;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:77.26:0,77,1169	0/0:10,0:10:27.09:0,27,427	0/0:63,0:26:46.32:0,46,934	0/0:51,0:18:29.46:0,29,509	0/0:28,0:28:75.24:0,75,1174	0/1:25,2:27:42.88:342,0,43	0/1:18,0:18:77.38:77,0,88	0/0:44,0:43:92.21:0,92,1924	0/0:35,0:35:83.28:0,83,1476	0/1:47,3:49:52.50:658,0,52	1/1:31,0:30:18.96:675,19,0	0/1:36,0:36:31.48:497,0,31	1/1:12,25:38:14.54:977,15,0	1/1:38,3:41:1.45:826,1,0	0/0:50,0:50:99:0,150,2352	0/1:45,4:49:88.06:720,0,88	0/0:14,0:14:42.14:0,42,656	0/0:8,0:8:16.75:0,17,319	0/0:19,0:19:51.09:0,51,771	0/0:23,0:23:63.13:0,63,994	0/0:54,0:54:99:0,123,2445	0/1:24,4:28:21:509,0,21	0/1:28,3:31:1.37:470,0,1	0/1:22,2:24:13.95:354,0,14	0/1:45,2:47:36.72:628,0,37	0/0:37,0:37:75.17:0,75,1658	0/0:37,0:37:99:0,111,1750	0/0:12,0:12:24.07:0,24,363
chr10	22097369	.	CGT	C	4103.63	PASS	AB=0.881;AC=19;AF=0.339;AN=56;BaseQRankSum=19.064;DP=931;FS=15.800;HRun=0;HaplotypeScore=191.7563;InbreedingCoeff=0.2606;MQ=59.74;MQ0=15;MQRankSum=0.631;QD=9.41;ReadPosRankSum=5.476;VQSLOD=1.7435;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:47.35:0,47,1200	0/0:10,0:10:27.09:0,27,462	0/0:59,3:26:17.62:0,18,758	0/0:48,1:17:25.96:0,26,318	0/0:28,1:29:76.80:0,77,1316	0/1:20,6:26:29.61:228,0,30	0/1:17,2:19:84.48:84,0,105	0/0:43,0:42:99:0,105,1977	0/0:35,0:35:99:0,101,1744	0/1:41,8:48:88.40:360,0,88	1/1:28,2:29:20.74:413,21,0	1/1:34,3:37:8.14:412,8,0	1/1:35,2:37:35.90:468,36,0	0/1:30,7:37:23.95:401,0,24	0/0:49,0:49:99:0,146,2654	0/1:44,6:50:64.25:443,0,64	0/0:15,0:15:45.15:0,45,756	0/1:6,1:7:19.21:19,0,281	0/0:20,0:20:60.12:0,60,966	0/0:24,0:24:65.68:0,66,1158	0/0:56,0:56:99:0,150,2923	0/1:21,6:27:22.16:265,0,22	1/1:28,4:32:13.80:311,14,0	1/1:20,4:24:18.38:284,18,0	0/1:44,4:48:80.78:404,0,81	0/0:38,0:38:8.60:0,9,663	0/0:35,0:35:54.57:0,55,738	0/1:13,0:13:11.87:12,0,179
chr10	22097371	.	T	TAC	11724.57	PASS	AB=0.985;AC=18;AF=0.321;AN=56;BaseQRankSum=10.866;DP=935;FS=14.596;HRun=0;HaplotypeScore=168.1878;InbreedingCoeff=0.5473;MQ=59.55;MQ0=16;MQRankSum=-0.358;QD=27.92;ReadPosRankSum=0.381;VQSLOD=5.2061;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:54.09:0,54,603	0/0:9,0:9:24.03:0,24,265	0/0:64,0:25:22.75:0,23,215	0/0:48,0:17:11.80:0,12,125	0/0:27,0:29:68.88:0,69,791	0/1:26,0:26:52.02:658,0,52	0/1:20,0:20:74.28:349,0,74	0/0:40,0:39:72.20:0,72,847	0/0:36,0:36:59.27:0,59,846	1/1:45,4:48:26.52:1330,27,0	0/1:28,1:28:3.60:897,0,4	1/1:35,3:38:72.84:1210,73,0	1/1:38,0:40:53.68:528,54,0	1/1:32,4:36:61.95:1399,62,0	0/0:47,0:48:99:0,120,1433	0/1:50,1:51:34.28:1358,0,34	0/0:15,0:15:36.11:0,36,436	0/0:8,0:8:14.96:0,15,168	0/0:20,0:20:39.09:0,39,457	0/0:23,0:23:36.11:0,36,437	0/0:56,0:57:99:0,138,1578	0/1:26,1:27:6.58:864,0,7	1/1:29,2:31:33.31:965,33,0	0/1:26,0:26:48.95:725,0,49	1/1:46,1:47:67.14:1443,67,0	0/0:39,0:39:48.34:0,48,1051	0/0:35,0:35:83.46:0,83,970	0/0:13,0:13:33.09:0,33,376
chr10	22097706	.	GCTC	G	857.50	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-1.220;DP=719;FS=3.232;HRun=0;HaplotypeScore=129.2090;InbreedingCoeff=0.9990;MQ=88.59;MQ0=0;MQRankSum=-3.035;QD=40.83;ReadPosRankSum=1.690;VQSLOD=4.7323;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,105,2383	0/0:11,0:11:33.09:0,33,674	0/0:29,0:29:84.28:0,84,1923	0/0:25,0:25:75.09:0,75,1638	0/0:35,0:35:96.28:0,96,2130	0/0:22,0:22:63.19:0,63,1362	0/0:17,0:17:51.18:0,51,1204	0/0:24,0:24:63.20:0,63,1363	0/0:26,0:26:78.24:0,78,1747	0/0:36,0:36:99:0,108,2427	0/0:28,0:28:81.28:0,81,1889	0/0:32,0:32:96.31:0,96,2218	0/0:26,0:26:78.27:0,78,1801	0/0:36,0:36:99:0,108,2428	0/0:32,0:32:96.32:0,96,2224	0/0:32,0:32:96.32:0,96,2225	1/1:0,21:21:54.19:952,54,0	0/0:11,0:11:33.11:0,33,780	0/0:18,0:18:54.18:0,54,1234	0/0:28,0:28:81.27:0,81,1870	0/0:19,0:19:57.18:0,57,1301	0/0:26,0:26:75.26:0,75,1768	0/0:35,0:35:99:0,99,2313	0/0:18,0:18:54.17:0,54,1214	0/0:22,0:22:66.23:0,66,1561	0/0:33,0:33:96.28:0,96,2011	0/0:32,0:31:96.33:0,96,2268	0/0:10,0:10:30.10:0,30,709
chr10	22099851	.	AC	A	2281.36	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.651;DP=704;FS=15.059;HRun=1;HaplotypeScore=68.9294;InbreedingCoeff=0.9991;MQ=60.12;MQ0=5;MQRankSum=4.397;QD=36.21;ReadPosRankSum=1.110;VQSLOD=2.2868;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,30:31:81.12:1083,81,0	0/0:10,0:10:30.10:0,30,479	0/0:35,0:22:44.33:0,44,724	0/0:41,0:30:87.23:0,87,1301	1/1:0,32:32:96.29:1320,96,0	0/0:20,0:19:60.20:0,60,955	0/0:9,0:9:27.09:0,27,429	0/0:40,0:40:99:0,117,1819	0/0:21,0:21:63.16:0,63,956	0/0:31,0:30:93.32:0,93,1482	0/0:23,0:23:69.22:0,69,1078	0/0:31,0:31:93.32:0,93,1485	0/0:34,0:34:99:0,102,1544	0/0:23,0:23:69.24:0,69,1095	0/0:33,0:33:99:0,99,1488	0/0:35,0:35:99:0,102,1578	0/0:18,0:18:37.39:0,37,773	0/0:30,0:30:90.31:0,90,1424	0/0:19,0:19:57.15:0,57,828	0/0:21,0:21:60.20:0,60,957	0/0:28,0:28:84.27:0,84,1318	0/0:12,0:12:36.12:0,36,572	0/0:21,0:21:63.20:0,63,980	0/0:20,0:20:60.20:0,60,948	0/0:16,0:16:48.11:0,48,738	0/0:28,0:28:84.27:0,84,1299	0/0:26,0:26:78.25:0,78,1222	0/0:16,0:16:45.15:0,45,714
chr10	22101189	.	C	CGAAT	15964.13	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=12.375;DP=560;FS=0.000;HRun=0;HaplotypeScore=99.3143;InbreedingCoeff=0.9958;MQ=66.77;MQ0=0;MQRankSum=-1.266;QD=45.87;ReadPosRankSum=5.478;VQSLOD=4.8065;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,13:20:34.52:678,35,0	0/0:12,0:12:33.08:0,33,579	0/0:17,0:14:35.28:0,35,667	0/0:12,0:11:26.33:0,26,357	1/1:18,20:38:47.88:1719,48,0	1/1:2,12:17:21.61:579,22,0	1/1:2,8:10:15.05:364,15,0	0/0:33,0:33:99:0,99,1912	0/0:12,0:12:33.10:0,33,653	1/1:3,21:26:43.39:1371,43,0	1/1:2,21:25:46.95:1114,47,0	1/1:0,17:18:36.12:864,36,0	1/1:3,23:29:57.19:1456,57,0	1/1:2,14:19:39.13:935,39,0	0/0:17,0:17:51.18:0,51,1064	1/1:3,15:18:43.39:1073,43,0	0/0:27,0:27:72.20:0,72,1363	0/0:20,0:20:57.11:0,57,1048	0/0:18,0:18:54.14:0,54,971	0/0:32,0:32:93.28:0,93,1775	0/0:12,0:12:36.11:0,36,690	1/1:2,12:16:33.99:761,34,0	1/1:2,18:22:35.48:800,35,0	1/1:0,7:9:21.07:510,21,0	1/1:0,13:14:27.09:648,27,0	1/1:3,23:27:39.37:1566,39,0	1/1:7,19:29:36.31:946,36,0	1/1:2,9:11:24.08:579,24,0
chr10	22101581	.	G	GA	1915.85	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-8.205;DP=627;FS=5.615;HRun=7;HaplotypeScore=58.3353;InbreedingCoeff=0.9142;MQ=70.72;MQ0=0;MQRankSum=-1.196;QD=29.47;ReadPosRankSum=1.313;VQSLOD=4.2666;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,108,1029	0/0:10,0:10:29.99:0,30,274	0/0:11,0:11:4.37:0,4,138	0/0:5,0:5:5.97:0,6,48	0/0:38,0:38:99:0,108,1033	0/0:27,0:27:72.11:0,72,695	0/0:16,0:16:42.03:0,42,395	0/0:26,0:26:69.09:0,69,662	0/0:20,0:20:54.08:0,54,517	0/0:19,0:19:51.08:0,51,493	0/0:27,0:27:75.12:0,75,724	0/0:26,0:26:75.12:0,75,724	0/0:28,0:28:75.08:0,75,712	0/0:20,0:20:54.08:0,54,522	0/0:39,0:39:99:0,111,1072	0/0:25,0:25:63.08:0,63,603	0/0:26,0:26:69.08:0,69,659	0/0:20,0:20:57.08:0,57,547	0/0:14,0:14:33.05:0,33,319	0/0:30,0:30:78.09:0,78,748	0/0:10,0:10:24.04:0,24,232	0/0:22,0:22:54.08:0,54,521	0/0:29,0:29:78.11:0,78,747	0/0:14,0:14:42.07:0,42,406	0/0:23,0:23:63.05:0,63,599	1/1:1,28:29:87.08:1015,87,0	1/1:6,24:30:69.20:825,69,0	1/1:0,6:6:18.06:217,18,0
chr10	22101884	.	CACAA	C	9814.42	PASS	AB=0.760;AC=24;AF=0.429;AN=56;BaseQRankSum=13.379;DP=831;FS=0.000;HRun=0;HaplotypeScore=147.5286;InbreedingCoeff=0.8387;MQ=65.97;MQ0=6;MQRankSum=4.508;QD=25.90;ReadPosRankSum=3.681;VQSLOD=4.4946;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:90.27:0,90,2080	0/0:13,0:13:30.10:0,30,719	0/0:35,0:27:36.11:0,36,738	0/0:34,0:29:36.12:0,36,775	0/0:29,0:29:69.24:0,69,1669	1/1:4,19:23:30.10:489,30,0	1/1:5,16:21:33.11:526,33,0	0/0:33,0:33:39.60:0,40,885	0/0:30,0:30:63.20:0,63,1404	1/1:12,24:35:69.20:1053,69,0	1/1:7,23:30:51.17:807,51,0	1/1:10,19:29:48.16:783,48,0	1/1:6,29:35:78.27:1273,78,0	1/1:5,38:43:93.32:1518,93,0	0/0:48,1:49:59.39:0,59,2428	0/1:5,15:20:24.85:675,0,25	0/0:40,0:40:99:0,99,2325	0/0:32,0:32:75.26:0,75,1762	0/0:14,0:14:24.06:0,24,534	0/0:45,0:45:99:0,105,2452	0/0:23,1:24:5.22:0,5,1146	1/1:4,18:22:45.15:734,45,0	1/1:7,17:23:35.95:575,36,0	1/1:13,25:38:57.19:930,57,0	1/1:8,13:21:27.09:441,27,0	0/1:35,2:37:10.66:11,0,1805	0/0:26,0:26:60.21:0,60,1404	0/0:6,0:6:12.04:0,12,292
chr10	22102476	.	GA	G	3060.35	PASS	AB=1.000;AC=19;AF=0.864;AN=22;BaseQRankSum=-1.531;DP=206;FS=1.218;HRun=13;HaplotypeScore=71.2971;InbreedingCoeff=0.7387;MQ=65.54;MQ0=2;MQRankSum=0.623;QD=15.86;ReadPosRankSum=2.845;VQSLOD=4.7862;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	1/1:9,2:11:23.50:182,23,0	0/0:13,0:5:12.03:0,12,130	0/1:10,0:4:2.85:3,0,59	./.	./.	./.	1/1:10,19:29:56.89:485,57,0	1/1:9,2:11:23.77:190,24,0	./.	./.	./.	./.	./.	1/1:18,2:20:34.32:374,34,0	./.	1/1:26,4:30:62.63:498,63,0	1/1:21,0:21:25.39:263,25,0	1/1:23,3:25:40.10:522,40,0	1/1:20,3:23:53.80:448,54,0	1/1:11,1:11:25.46:195,25,0	./.	./.	./.	./.	./.	./.	./.
chr10	22102487	.	A	AC	70.58	PASS	AC=16;AF=0.364;AN=44;BaseQRankSum=4.310;DP=229;FS=25.736;HRun=0;HaplotypeScore=49.8949;InbreedingCoeff=0.6165;MQ=78.16;MQ0=2;MQRankSum=0.177;QD=3.92;ReadPosRankSum=-4.960;VQSLOD=0.6873;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	0/0:9,0:9:27.09:0,27,376	0/0:18,0:10:21.03:0,21,247	0/0:11,0:5:0.05:0,0,114	1/1:3,0:3:5.92:70,6,0	1/1:1,1:2:2.63:15,3,0	0/0:1,0:1:0:0,0,0	0/0:28,0:28:77.46:0,77,1030	0/0:12,0:12:33.11:0,33,449	1/1:0,2:2:5.21:22,5,0	0/0:1,0:1:0:0,0,0	1/1:0,2:2:2.88:15,3,0	1/1:1,2:3:2.75:15,3,0	./.	0/0:26,0:26:69.23:0,69,964	1/1:1,0:1:3:25,3,0	0/0:27,0:27:72.24:0,72,1006	0/0:18,0:18:48.16:0,48,662	0/0:25,0:25:75.25:0,75,1035	0/0:21,0:21:51.17:0,51,705	0/0:10,0:10:30.10:0,30,417	0/0:1,0:1:0:0,0,0	1/1:1,0:1:2.99:23,3,0	./.	./.	./.	1/1:2,0:2:2.72:22,3,0	./.
chr10	22102589	.	AT	A	9890.07	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=13.155;DP=626;FS=20.533;HRun=9;HaplotypeScore=62.9229;InbreedingCoeff=0.9941;MQ=67.12;MQ0=0;MQRankSum=-1.491;QD=23.33;ReadPosRankSum=4.619;VQSLOD=3.6206;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,24:26:60.03:548,60,0	0/0:6,0:6:15.03:0,15,164	0/0:9,0:9:15.14:0,15,203	0/0:9,0:8:17.94:0,18,164	1/1:0,29:29:81.03:741,81,0	1/1:3,22:25:54.01:494,54,0	1/1:2,12:14:27.01:247,27,0	0/0:28,0:28:72.20:0,72,821	0/0:26,0:26:66.20:0,66,762	1/1:6,23:29:68.98:622,69,0	1/1:2,19:21:51.01:467,51,0	1/1:1,18:19:51.03:467,51,0	1/1:1,33:34:93.05:849,93,0	1/1:2,34:36:87.04:795,87,0	0/0:23,0:23:60.18:0,60,692	1/1:1,31:32:84.05:768,84,0	0/0:24,0:24:60.15:0,60,678	0/0:26,0:26:63.15:0,63,712	0/0:19,0:19:48.13:0,48,545	0/0:18,0:18:51.15:0,51,589	0/0:14,0:14:36.09:0,36,399	1/1:1,17:18:51.03:467,51,0	1/1:3,15:18:36:329,36,0	1/1:0,18:18:42.02:384,42,0	1/1:0,25:25:75.04:687,75,0	1/1:1,19:20:57:515,57,0	1/1:3,38:41:99:988,108,0	1/1:0,19:19:57.03:522,57,0
chr10	22103228	.	AT	A	1565.15	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=4.498;DP=563;FS=4.065;HRun=6;HaplotypeScore=90.2622;InbreedingCoeff=0.9893;MQ=73.66;MQ0=0;MQRankSum=-0.793;QD=27.46;ReadPosRankSum=1.569;VQSLOD=4.1071;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:45.15:0,45,592	0/0:12,0:12:33.11:0,33,434	0/0:12,0:12:26.85:0,27,380	0/0:7,0:7:18.03:0,18,201	0/0:29,0:29:81.26:0,81,1066	0/0:20,0:20:57.16:0,57,722	0/0:10,0:10:24.08:0,24,316	0/0:35,0:35:90.27:0,90,1144	0/0:18,0:18:48.15:0,48,617	0/0:25,0:25:72.23:0,72,946	0/0:30,0:30:87.27:0,87,1119	0/0:27,0:27:75.24:0,75,987	0/0:21,0:21:60.19:0,60,788	0/0:15,0:15:33.11:0,33,434	0/0:31,0:31:90.27:0,90,1157	0/0:24,0:24:69.21:0,69,892	0/0:20,0:20:60.20:0,60,789	0/0:13,0:13:39.13:0,39,511	0/0:22,0:22:63.19:0,63,814	0/0:33,0:33:96.31:0,96,1258	0/0:8,0:8:15.01:0,15,165	0/0:12,0:12:33.11:0,33,434	0/0:20,0:20:54.18:0,54,710	0/0:8,0:8:24.08:0,24,316	0/0:38,0:37:99:0,102,1310	1/1:2,18:20:54.14:580,54,0	1/1:1,23:24:66.17:709,66,0	1/1:0,13:13:39.10:419,39,0
chr10	22103522	.	GT	G	9314.94	PASS	AB=0.909;AC=35;AF=0.625;AN=56;BaseQRankSum=13.145;DP=553;FS=2.033;HRun=8;HaplotypeScore=65.2192;InbreedingCoeff=0.9059;MQ=73.16;MQ0=0;MQRankSum=-3.334;QD=24.51;ReadPosRankSum=4.644;VQSLOD=5.5177;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,15:16:39.01:367,39,0	0/0:10,0:10:30.09:0,30,362	0/0:16,0:16:36.05:0,36,384	0/0:9,0:9:17.72:0,18,177	1/1:2,22:24:60.09:579,60,0	1/1:1,29:30:78.12:753,78,0	1/1:2,8:10:24.04:232,24,0	0/0:21,0:21:51.13:0,51,577	0/0:22,0:22:60.06:0,60,683	1/1:1,25:26:75.12:724,75,0	1/1:0,22:22:60.04:570,60,0	1/1:3,21:24:60.09:579,60,0	1/1:4,14:18:39.05:377,39,0	1/1:0,25:25:69.11:666,69,0	0/0:21,0:21:57.15:0,57,668	1/1:6,24:30:66.10:637,66,0	0/1:9,1:10:30.72:31,0,160	0/0:8,0:8:18.06:0,18,217	0/0:27,0:27:66.17:0,66,766	0/0:28,0:28:84.26:0,84,1014	0/0:11,0:11:30.09:0,30,362	1/1:1,17:18:48.03:454,48,0	1/1:0,16:16:39.06:377,39,0	1/1:1,10:11:30.05:290,30,0	1/1:2,21:23:63.10:608,63,0	1/1:1,36:37:99:1037,108,0	1/1:5,32:37:99:976,102,0	1/1:1,2:3:6.01:58,6,0
chr10	22103560	.	GA	G	1905.87	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=7.835;DP=574;FS=0.000;HRun=7;HaplotypeScore=81.1858;InbreedingCoeff=0.9216;MQ=74.64;MQ0=0;MQRankSum=-9.252;QD=24.75;ReadPosRankSum=0.894;VQSLOD=3.8487;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:30.10:0,30,377	0/0:9,0:9:27.09:0,27,340	0/0:20,0:20:42.07:0,42,493	0/0:13,0:12:25.32:0,25,291	0/0:23,0:23:66.21:0,66,830	0/0:33,0:33:93.29:0,93,1158	0/0:11,0:11:33.11:0,33,415	0/0:33,0:33:90.28:0,90,1121	0/0:19,0:19:54.17:0,54,679	0/0:31,0:31:87.27:0,87,1084	0/0:24,0:24:60.19:0,60,748	0/0:30,0:30:84.27:0,84,1057	0/0:16,0:16:30.55:0,31,465	0/0:28,0:28:72.23:0,72,906	0/0:24,0:24:63.20:0,63,793	0/0:27,0:27:78.25:0,78,981	0/0:12,0:12:36.12:0,36,453	0/0:8,0:8:21.07:0,21,264	0/0:18,0:18:51.16:0,51,642	0/0:27,0:27:75.23:0,75,923	0/0:12,0:12:30.10:0,30,377	0/0:20,0:20:51.16:0,51,637	0/0:13,0:13:36.10:0,36,440	0/0:13,0:13:36.11:0,36,452	0/0:20,0:20:51.16:0,51,642	1/1:7,24:31:2.68:659,3,0	1/1:2,39:41:99:1224,120,0	1/1:0,5:5:15.03:153,15,0
chr10	22103810	.	T	TA	7834.54	PASS	AB=0.988;AC=51;AF=0.911;AN=56;BaseQRankSum=-2.599;DP=568;FS=36.976;HRun=11;HaplotypeScore=71.3807;InbreedingCoeff=0.4167;MQ=73.53;MQ0=5;MQRankSum=-2.023;QD=14.17;ReadPosRankSum=1.533;VQSLOD=2.6877;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,29:41:57.10:688,57,0	1/1:3,1:9:17.21:102,17,0	0/1:26,0:21:2.41:2,0,129	0/1:15,0:10:18.45:18,0,48	0/0:14,1:15:11.40:0,11,271	1/1:3,18:21:33.88:524,34,0	1/1:3,18:22:4.45:388,4,0	1/1:9,2:27:47.60:258,48,0	1/1:4,1:19:25.57:128,26,0	1/1:4,19:23:56.98:563,57,0	1/1:8,16:24:5.54:352,6,0	1/1:4,17:21:24.86:433,25,0	1/1:8,21:29:23.90:593,24,0	1/1:2,16:18:42.08:426,42,0	1/1:2,0:23:51.25:261,51,0	1/1:5,23:29:7.47:425,7,0	1/1:2,1:17:31.41:173,31,0	1/1:6,1:16:28.57:159,29,0	1/1:6,1:20:43.34:264,43,0	1/1:1,1:21:49.29:274,49,0	1/1:1,0:5:11.36:57,11,0	1/1:5,19:24:54.07:537,54,0	1/1:6,19:25:12.74:467,13,0	1/1:6,14:20:42.08:426,42,0	1/1:2,10:12:27.05:274,27,0	1/1:13,0:13:4.63:32,5,0	0/1:23,0:22:2.55:3,0,20	1/1:7,0:7:1.89:6,2,0
chr10	22103821	.	AC	A	1354.23	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-5.218;DP=537;FS=22.660;HRun=1;HaplotypeScore=86.6575;InbreedingCoeff=0.9842;MQ=73.80;MQ0=4;MQRankSum=0.287;QD=30.78;ReadPosRankSum=-1.199;VQSLOD=1.8649;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,107,789	0/0:7,0:7:20.74:0,21,141	0/0:20,0:14:18.48:0,18,348	0/0:18,0:15:25.31:0,25,328	0/0:16,0:16:48.07:0,48,585	0/0:20,0:20:59.19:0,59,409	0/0:21,0:21:19.87:0,20,298	0/0:25,0:25:61.64:0,62,446	0/0:15,0:15:29.59:0,30,196	0/0:23,0:23:68.20:0,68,503	0/0:20,0:20:36.83:0,37,407	0/0:19,0:19:50.35:0,50,355	0/0:25,0:26:72.29:0,72,503	0/0:18,0:18:50.27:0,50,334	0/0:21,0:21:53.24:0,53,350	0/0:27,0:27:65.29:0,65,484	0/0:17,0:16:35.49:0,35,230	0/0:13,0:13:32.49:0,32,211	0/0:21,0:21:61.97:0,62,452	0/0:22,0:22:52.17:0,52,378	0/0:5,0:5:14.82:0,15,102	0/0:19,0:19:56.25:0,56,379	0/0:24,0:24:36.38:0,36,396	0/0:19,0:19:56.35:0,56,387	0/0:14,0:14:38.55:0,39,269	1/1:1,16:17:51.02:581,51,0	1/1:7,14:20:50.81:668,51,0	1/1:0,6:6:18.06:247,18,0
chr10	22103914	.	GGGGGA	G	6417.82	PASS	AB=1.000;AC=28;AF=0.500;AN=56;BaseQRankSum=-0.725;DP=397;FS=10.778;HRun=0;HaplotypeScore=79.5225;InbreedingCoeff=0.7290;MQ=78.67;MQ0=8;MQRankSum=-2.718;QD=31.46;ReadPosRankSum=5.520;VQSLOD=3.6927;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:9,12:21:48.16:888,48,0	0/0:3,0:3:3.01:0,3,32	0/0:55,0:22:28.26:0,28,406	0/0:64,0:28:31.58:0,32,405	0/0:4,0:4:3.01:0,3,57	1/1:0,11:11:15.05:297,15,0	1/1:6,12:18:14.56:683,15,0	0/0:5,0:5:6.91:0,7,180	0/0:6,0:6:9.03:0,9,161	1/1:0,15:15:45.15:836,45,0	1/1:3,4:7:6.02:117,6,0	1/1:1,10:11:18.06:357,18,0	1/1:9,7:16:39.02:620,39,0	1/1:3,15:18:30.10:595,30,0	0/0:13,0:13:25.19:0,25,644	1/1:3,14:17:27.09:536,27,0	0/0:17,0:17:42.12:0,42,1018	0/1:8,0:8:8.88:9,0,299	0/0:8,0:8:15.05:0,15,382	0/0:6,0:6:12.02:0,12,291	0/0:5,0:5:15.05:0,15,389	1/1:1,13:14:18.06:350,18,0	1/1:1,14:15:26.86:529,27,0	1/1:2,7:9:12.04:238,12,0	1/1:4,14:18:18.06:351,18,0	0/0:5,0:5:6.02:0,6,114	0/1:6,0:6:10.84:11,0,96	0/0:1,0:1:3.01:0,3,57
chr10	22104273	.	CA	C	10359.39	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=13.247;DP=517;FS=13.022;HRun=5;HaplotypeScore=57.8523;InbreedingCoeff=0.9957;MQ=81.97;MQ0=0;MQRankSum=-2.341;QD=30.83;ReadPosRankSum=4.427;VQSLOD=4.3958;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,14:14:39.11:442,39,0	0/0:5,0:5:15.05:0,15,205	0/0:18,0:18:35.85:0,36,462	0/0:14,0:13:24.24:0,24,364	1/1:0,29:29:81.23:919,81,0	1/1:2,20:22:48.14:544,48,0	1/1:0,12:12:33.09:374,33,0	0/0:33,0:33:93.30:0,93,1245	0/0:9,0:9:21.07:0,21,287	1/1:2,20:22:60.17:680,60,0	1/1:2,15:17:42.12:476,42,0	1/1:0,16:16:45.13:511,45,0	1/1:0,20:20:60.17:681,60,0	1/1:0,22:22:66.19:749,66,0	0/0:24,0:24:60.20:0,60,820	1/1:1,31:32:81.23:919,81,0	0/0:14,0:14:39.13:0,39,533	0/0:13,0:13:39.13:0,39,533	0/0:22,0:22:63.19:0,63,816	0/0:17,0:17:48.16:0,48,657	0/0:12,0:12:27.08:0,27,354	1/1:0,7:7:21.06:238,21,0	1/1:0,10:10:24.03:272,24,0	1/1:0,26:26:66.19:749,66,0	1/1:0,22:22:63.18:715,63,0	1/1:0,31:31:93.20:1038,93,0	1/1:1,22:23:60.17:678,60,0	1/1:0,11:11:33.09:374,33,0
chr10	22104480	.	G	GA	4639.65	PASS	AB=0.943;AC=39;AF=0.696;AN=56;BaseQRankSum=13.173;DP=550;FS=0.777;HRun=11;HaplotypeScore=83.8226;InbreedingCoeff=0.6274;MQ=76.44;MQ0=0;MQRankSum=-0.061;QD=10.72;ReadPosRankSum=2.114;VQSLOD=4.4773;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:26:64.12:362,64,0	0/0:7,0:7:20.92:0,21,163	0/1:14,0:15:7.84:24,0,8	0/1:19,0:18:0.30:0,0,50	1/1:27,0:27:17.36:264,17,0	1/1:25,0:25:52.59:307,53,0	1/1:14,0:14:11.97:170,12,0	0/0:32,1:33:47.20:0,47,547	0/1:13,1:14:7.55:8,0,217	1/1:19,0:19:22.27:192,22,0	1/1:18,0:18:43.64:251,44,0	1/1:11,0:11:29.42:189,29,0	1/1:19,0:19:23.84:255,24,0	1/1:24,0:24:15.14:291,15,0	0/1:15,2:17:25.03:25,0,196	1/1:25,0:25:55.29:313,55,0	0/0:16,0:16:38.85:0,39,302	0/1:14,2:16:15.91:16,0,257	0/0:28,0:29:65.99:0,66,497	0/0:25,2:27:23.30:0,23,364	0/0:5,0:5:11.95:0,12,93	1/1:18,0:18:49.44:275,49,0	1/1:29,0:29:23.50:313,23,0	1/1:20,0:20:52.47:298,52,0	1/1:25,0:25:69.89:405,70,0	1/1:21,0:21:51.27:256,51,0	1/1:25,0:25:58.78:377,59,0	1/1:6,0:6:8.75:50,9,0
chr10	22104491	.	A	AG	11760.03	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-7.917;DP=555;FS=0.340;HRun=0;HaplotypeScore=55.3752;InbreedingCoeff=0.9457;MQ=73.95;MQ0=0;MQRankSum=1.794;QD=32.31;ReadPosRankSum=4.468;VQSLOD=4.5158;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,25:26:66.22:889,66,0	0/0:8,0:8:24.07:0,24,315	0/0:11,0:11:11.67:0,12,124	0/0:12,0:12:20.23:0,20,224	1/1:3,23:27:57.13:800,57,0	1/1:0,25:25:54.18:734,54,0	1/1:3,14:17:30.10:408,30,0	0/0:38,0:38:99:0,107,1310	0/0:15,1:16:0.61:0,1,488	1/1:1,20:22:61.69:744,62,0	1/1:0,16:17:48.05:603,48,0	1/1:1,15:16:30.10:405,30,0	1/1:1,19:20:45.15:603,45,0	1/1:7,17:25:58.97:816,59,0	0/0:14,0:14:25.61:0,26,401	1/1:0,21:21:57.19:768,57,0	0/0:15,0:15:44.13:0,44,563	0/0:16,0:16:25.52:0,26,531	0/0:35,0:35:99:0,105,1201	0/0:22,0:22:59.46:0,59,789	0/0:4,0:4:12.04:0,12,166	1/1:0,19:19:57.02:728,57,0	1/1:7,20:28:69.90:923,70,0	1/1:1,18:19:51.16:694,51,0	1/1:1,28:30:69.21:921,69,0	1/1:0,22:22:66.08:820,66,0	1/1:0,26:27:60.14:782,60,0	1/1:0,3:3:9.03:122,9,0
chr10	22105663	.	A	AT	5238.82	PASS	AB=0.875;AC=27;AF=0.482;AN=56;BaseQRankSum=-5.015;DP=400;FS=4.410;HRun=6;HaplotypeScore=88.6205;InbreedingCoeff=0.8897;MQ=67.41;MQ0=0;MQRankSum=2.167;QD=25.56;ReadPosRankSum=0.446;VQSLOD=4.9334;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:0,0:19:24.44:0,24,71	0/0:9,0:9:20:0,20,102	0/0:5,0:5:11.24:0,11,97	0/0:8,0:7:5.11:0,5,63	1/1:2,9:11:27.09:337,27,0	1/1:0,17:17:42.13:527,42,0	1/1:2,10:12:30.10:377,30,0	0/0:33,0:33:76.53:0,77,398	0/0:16,0:16:32.30:0,32,164	1/1:2,11:13:33.07:397,33,0	1/1:2,12:14:33.02:393,33,0	1/1:1,18:19:36.11:452,36,0	1/1:3,13:16:26.95:339,27,0	1/1:3,21:24:51.03:617,51,0	0/0:19,0:19:24.07:0,24,213	1/1:0,14:14:36.11:452,36,0	0/0:25,0:24:49.81:0,50,266	0/0:16,0:16:40.36:0,40,218	0/0:17,0:17:36.51:0,37,190	0/0:10,0:10:20.13:0,20,113	0/0:6,0:6:14.37:0,14,74	1/1:1,5:6:14.96:167,15,0	1/1:1,4:5:12.04:150,12,0	1/1:1,7:8:18.06:225,18,0	1/1:3,22:25:60.19:754,60,0	0/1:18,3:21:53.13:53,0,444	0/0:8,0:8:24.04:0,24,238	0/0:4,0:4:12.03:0,12,122
chr10	22108862	.	A	AACACACACACACACAC	5521.55	PASS	AB=0.952;AC=35;AF=0.625;AN=56;BaseQRankSum=-5.752;DP=597;FS=10.269;HRun=0;HaplotypeScore=253.0908;InbreedingCoeff=0.2764;MQ=68.14;MQ0=7;MQRankSum=-1.602;QD=13.08;ReadPosRankSum=-7.257;VQSLOD=-0.0400;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,109,2455	0/0:5,0:9:15.30:0,15,639	0/0:31,0:24:66.16:0,66,944	0/0:34,0:18:53.93:0,54,694	0/0:28,0:27:81.20:0,81,2381	1/1:17,0:17:17.48:219,17,0	1/1:26,0:27:22.77:799,23,0	0/1:23,0:24:99:222,0,227	0/1:15,0:16:88.76:89,0,478	1/1:20,0:20:34.92:508,35,0	1/1:12,0:11:11.97:96,12,0	0/1:9,0:25:2.69:168,0,3	1/1:20,0:20:22.16:506,22,0	1/1:15,1:15:17.46:346,17,0	0/0:30,0:30:70.92:0,71,1204	1/1:8,7:23:1.03:223,1,0	0/1:19,0:22:66.81:67,0,1082	0/1:18,0:22:78.31:78,0,951	0/1:13,0:16:99:214,0,361	0/1:24,0:24:89.77:90,0,1280	0/1:27,0:32:9.69:10,0,1411	1/1:8,0:9:11.44:97,11,0	1/1:10,0:11:5.89:98,6,0	1/1:8,10:25:5.51:442,6,0	1/1:16,0:16:16.30:313,16,0	0/1:17,0:17:8.30:89,0,8	1/1:21,0:21:36.05:691,36,0	1/1:6,0:6:8.98:157,9,0
chr10	22108864	.	TAC	T	927.32	PASS	AB=0.989;AC=10;AF=0.185;AN=54;BaseQRankSum=-1.042;DP=693;FS=5.900;HRun=0;HaplotypeScore=146.4128;InbreedingCoeff=0.1502;MQ=62.03;MQ0=8;MQRankSum=3.523;QD=4.31;ReadPosRankSum=2.571;VQSLOD=2.7065;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:26,17:44:35.93:389,36,0	0/1:10,0:10:54.28:54,0,137	0/1:27,2:22:51.97:52,0,120	0/0:35,0:19:5.81:0,6,57	1/1:13,15:28:41.95:457,42,0	0/0:22,0:21:14.99:0,15,146	0/0:29,0:28:10.03:0,10,103	0/0:25,0:25:7.81:0,8,245	0/0:18,0:19:6.23:0,6,260	0/0:23,0:21:35.83:0,36,325	./.	0/0:27,0:27:11.90:0,12,92	0/0:29,0:29:5.94:0,6,44	0/0:27,0:26:5.89:0,6,50	0/0:21,0:41:38.86:0,39,359	0/0:25,0:24:14.89:0,15,112	0/1:25,0:25:16.38:16,0,461	0/1:23,0:23:16.14:16,0,444	0/1:19,0:19:48.50:49,0,65	0/0:25,0:25:48.15:0,48,708	0/1:36,0:36:45.32:45,0,586	0/0:16,0:15:2.96:0,3,27	0/0:18,0:18:8.58:0,9,74	0/0:27,0:26:11.87:0,12,98	0/0:22,0:22:9:0,9,107	0/0:19,0:18:20.75:0,21,139	0/0:26,0:26:29.90:0,30,225	0/0:7,0:7:8.92:0,9,65
chr10	22109223	.	AC	A	1522.54	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=2.348;DP=418;FS=1.297;HRun=1;HaplotypeScore=46.8768;InbreedingCoeff=0.9208;MQ=73.34;MQ0=0;MQRankSum=-1.404;QD=30.45;ReadPosRankSum=0.133;VQSLOD=3.2324;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:33.08:0,33,460	0/0:8,0:8:24.06:0,24,331	0/0:7,0:7:21.07:0,21,307	0/0:7,0:7:15.04:0,15,202	0/0:34,0:33:99:0,102,1446	0/0:15,0:15:45.12:0,45,635	0/0:8,0:8:24.08:0,24,351	0/0:22,0:22:66.18:0,66,895	0/0:9,0:9:27.07:0,27,371	0/0:26,0:26:78.17:0,78,1049	0/0:13,0:13:36.10:0,36,505	0/0:12,0:12:36.09:0,36,486	0/0:18,0:18:54.18:0,54,790	0/0:12,0:12:36.08:0,36,486	0/0:17,0:17:51.11:0,51,667	0/0:12,0:12:36.12:0,36,527	0/0:19,0:19:57.05:0,57,739	0/0:18,0:18:54:0,54,696	0/0:18,0:18:51.16:0,51,729	0/0:32,0:32:96.25:0,96,1306	0/0:12,0:12:36.12:0,36,527	0/0:6,0:6:18.06:0,18,262	0/0:8,0:8:21.05:0,21,287	0/0:10,0:10:30.04:0,30,377	0/0:14,0:14:42.14:0,42,613	1/1:0,18:18:54.15:717,54,0	1/1:0,29:29:66.22:918,66,0	1/1:0,3:3:2.97:20,3,0
chr10	22110141	.	GAT	G	19185.76	PASS	AB=0.912;AC=41;AF=0.732;AN=56;BaseQRankSum=14.551;DP=685;FS=2.164;HRun=0;HaplotypeScore=87.6577;InbreedingCoeff=0.8978;MQ=77.04;MQ0=4;MQRankSum=-0.442;QD=38.07;ReadPosRankSum=2.502;VQSLOD=7.0102;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:66.23:0,66,1274	1/1:0,13:13:33.11:505,33,0	0/0:9,0:9:9.16:0,9,380	0/0:19,0:19:51.12:0,51,843	0/0:33,0:33:96.33:0,96,1841	1/1:0,37:37:99:1608,105,0	1/1:1,13:14:33.11:505,33,0	1/1:1,39:40:99:1729,117,0	1/1:0,15:15:42.14:643,42,0	1/1:0,23:23:69.23:1049,69,0	1/1:1,28:29:81.28:1240,81,0	1/1:0,26:26:72.24:1102,72,0	1/1:0,30:29:78.26:1194,78,0	1/1:1,25:26:60.20:916,60,0	0/0:39,0:39:99:0,114,2201	1/1:0,35:34:95.95:1470,96,0	1/1:0,11:11:24.05:367,24,0	1/1:0,17:17:45.15:689,45,0	1/1:1,9:10:24.07:344,24,0	1/1:0,38:37:96.32:1449,96,0	1/1:2,23:25:60.19:897,60,0	1/1:0,12:12:36.12:542,36,0	1/1:0,20:20:47.72:735,48,0	1/1:0,19:19:54.18:827,54,0	1/1:0,33:32:87.30:1332,87,0	0/1:28,3:31:44.55:45,0,1457	0/0:47,0:47:99:0,141,2609	0/0:11,0:11:33.11:0,33,636
chr10	22110656	.	CTT	C	13596.95	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=6.007;DP=651;FS=0.426;HRun=11;HaplotypeScore=94.9544;InbreedingCoeff=0.9738;MQ=72.62;MQ0=0;MQRankSum=-1.153;QD=24.86;ReadPosRankSum=3.760;VQSLOD=4.8544;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,13:17:33.07:351,33,0	1/1:2,7:9:18.04:192,18,0	0/0:19,0:21:8.55:0,9,464	0/0:6,0:7:14.51:0,15,162	1/1:5,35:40:75.29:1027,75,0	1/1:5,22:27:60.12:639,60,0	1/1:5,16:21:36.08:383,36,0	1/1:5,29:34:87.12:889,87,0	1/1:3,15:18:45.10:479,45,0	1/1:4,22:26:63.12:662,63,0	1/1:4,22:26:60.13:638,60,0	1/1:0,9:9:27.07:287,27,0	1/1:5,23:28:57.12:607,57,0	1/1:1,22:23:63.16:670,63,0	1/1:5,25:30:72.15:766,72,0	1/1:5,19:24:55.01:603,55,0	1/1:5,17:23:53.84:548,54,0	1/1:0,19:19:48.12:511,48,0	1/1:7,20:27:60.02:608,60,0	1/1:1,36:37:99:1084,102,0	1/1:1,8:9:15.03:160,15,0	1/1:3,21:24:63.13:670,63,0	1/1:4,23:29:53.78:610,54,0	1/1:3,20:23:45.11:479,45,0	1/1:0,24:24:69.17:734,69,0	0/0:35,0:35:84.25:0,84,1218	0/0:32,0:34:88.31:0,88,1264	0/0:6,0:7:21.07:0,21,305
chr10	22114043	.	T	TG	7309.77	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-3.926;DP=654;FS=11.036;HRun=6;HaplotypeScore=76.0700;InbreedingCoeff=0.9986;MQ=81.94;MQ0=0;MQRankSum=-5.643;QD=30.97;ReadPosRankSum=0.650;VQSLOD=4.7848;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,19:23:42.09:510,42,0	1/1:2,8:10:27.06:324,27,0	0/0:25,0:25:63.10:0,63,627	0/0:17,0:17:44.99:0,45,441	1/1:4,34:38:99:1306,105,0	0/0:28,0:28:63.13:0,63,643	0/0:24,0:24:51.08:0,51,512	1/1:4,34:38:99:1257,102,0	1/1:5,11:15:39.03:442,39,0	0/0:32,0:32:90.19:0,90,914	0/0:22,0:22:66.15:0,66,673	0/0:27,0:27:81.14:0,81,815	0/0:24,0:24:63.11:0,63,632	0/0:26,0:26:66.14:0,66,673	1/1:2,25:27:72.10:847,72,0	0/0:29,1:30:46.49:0,46,789	1/1:2,11:13:33.11:413,33,0	1/1:2,5:7:18.04:212,18,0	1/1:4,14:18:45.13:552,45,0	1/1:5,24:29:75.23:931,75,0	1/1:3,14:17:42.12:515,42,0	0/0:18,0:18:45.10:0,45,459	0/0:26,0:26:69.16:0,69,704	0/0:15,0:15:36.08:0,36,367	0/0:29,0:29:84.14:0,84,841	0/0:28,0:28:75.12:0,75,761	0/0:36,0:36:90.20:0,90,918	0/0:11,0:11:33.08:0,33,337
chr10	22114096	.	CAG	C	8413.88	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=12.504;DP=622;FS=5.443;HRun=0;HaplotypeScore=100.2385;InbreedingCoeff=0.9896;MQ=89.16;MQ0=0;MQRankSum=-7.689;QD=42.71;ReadPosRankSum=-2.490;VQSLOD=5.5389;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,21:23:65.95:996,66,0	1/1:1,11:12:36.10:553,36,0	0/0:27,0:27:81.27:0,81,1564	0/0:27,0:27:80.73:0,81,1350	1/1:4,25:29:84.08:1218,84,0	0/0:28,0:28:78.22:0,78,1542	0/0:27,0:27:72.19:0,72,1384	1/1:0,39:39:99:1633,105,0	1/1:0,13:13:39.12:609,39,0	0/0:31,0:31:93.26:0,93,1777	0/0:21,0:21:60.21:0,60,1216	0/0:25,0:25:69.18:0,69,1320	0/0:29,0:29:78.25:0,78,1541	0/0:30,0:30:81.28:0,81,1643	1/1:2,23:25:66.23:1069,66,0	0/0:30,1:31:32.78:0,33,1460	1/1:0,9:9:27.09:437,27,0	1/1:0,3:3:8.99:117,9,0	1/1:0,8:8:24.08:383,24,0	1/1:1,25:26:72.19:1136,72,0	1/1:4,6:10:18.02:263,18,0	0/0:12,0:12:36.12:0,36,730	0/0:20,0:20:54.17:0,54,1043	0/0:23,0:23:66.18:0,66,1295	0/0:20,0:20:57.18:0,57,1121	0/0:33,0:33:99:0,99,1967	0/0:33,0:33:99:0,99,1995	0/0:8,0:8:24.08:0,24,488
chr10	22114158	.	G	GGGATCTGGCTT	53775.36	PASS	AB=0.968;AC=47;AF=0.839;AN=56;BaseQRankSum=-6.360;DP=659;FS=0.389;HRun=0;HaplotypeScore=199.4497;InbreedingCoeff=0.7958;MQ=85.88;MQ0=0;MQRankSum=-15.617;QD=96.72;ReadPosRankSum=0.059;VQSLOD=4.8568;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,9:20:48.16:2330,48,0	1/1:2,7:9:21.07:1067,21,0	0/0:32,0:34:80.65:0,81,1987	0/0:32,0:31:74.42:0,74,1954	1/1:13,9:22:45.11:1418,45,0	1/1:12,16:30:66.16:3009,66,0	1/1:16,7:26:63.10:2695,63,0	1/1:33,5:38:90.25:3566,90,0	1/1:11,16:28:78.27:3943,78,0	1/1:9,13:23:54.16:2777,54,0	1/1:7,9:18:39.06:1152,39,0	1/1:9,8:21:48.16:2208,48,0	1/1:12,16:30:69.24:3454,69,0	1/1:15,16:34:81.28:3913,81,0	1/1:15,19:37:87.30:4444,87,0	1/1:9,23:36:87.26:4444,87,0	1/1:9,2:11:21.07:1024,21,0	1/1:2,3:6:12.04:594,12,0	1/1:14,1:17:42.11:1537,42,0	1/1:14,6:20:54.03:1765,54,0	1/1:3,1:6:8.99:356,9,0	1/1:6,8:15:45.07:1769,45,0	1/1:9,11:22:44.90:1329,45,0	1/1:13,6:22:26.84:818,27,0	1/1:12,20:34:93.23:4075,93,0	0/1:29,1:30:87.25:87,0,2461	0/0:35,0:35:93.32:0,93,3100	0/0:1,0:1:3.01:0,3,103
chr10	22114542	.	CTCCTGA	C	8957.51	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=14.373;DP=525;FS=0.000;HRun=0;HaplotypeScore=122.1281;InbreedingCoeff=0.9783;MQ=95.82;MQ0=0;MQRankSum=-14.678;QD=60.94;ReadPosRankSum=0.663;VQSLOD=4.7892;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,21:21:42.14:1074,42,0	1/1:0,7:7:15.05:384,15,0	0/0:36,0:36:99:0,102,3469	0/0:23,0:23:69.23:0,69,2280	1/1:0,16:16:24.08:613,24,0	0/0:31,0:31:93.30:0,93,3273	0/0:21,0:21:60.21:0,60,2166	1/1:0,20:20:60.19:1435,60,0	1/1:0,18:18:48.16:1226,48,0	0/0:27,0:27:81.28:0,81,2948	0/0:20,0:20:60.21:0,60,2096	0/0:12,0:12:36.12:0,36,1318	0/0:26,0:26:78.25:0,78,2773	0/0:23,0:23:69.24:0,69,2482	1/1:0,19:19:51.18:1300,51,0	0/0:26,0:26:78.26:0,78,2826	1/1:0,12:12:33.11:833,33,0	1/1:0,8:8:21.07:538,21,0	1/1:0,14:14:42.14:1024,42,0	1/1:0,8:8:15.05:378,15,0	1/1:0,4:4:6.02:154,6,0	0/0:16,0:16:48.16:0,48,1739	0/0:21,0:21:63.22:0,63,2231	0/0:19,0:19:57.20:0,57,2145	0/0:18,0:18:51.18:0,51,1833	0/0:28,0:28:84.29:0,84,2907	0/0:25,0:25:75.26:0,75,2689	0/0:6,0:6:18.06:0,18,678
chr10	22115746	.	A	AA	233.17	PASS	AB=0.937;AC=7;AF=0.140;AN=50;BaseQRankSum=5.437;DP=240;FS=0.000;HRun=0;HaplotypeScore=49.8401;InbreedingCoeff=0.1058;MQ=24.37;MQ0=64;MQRankSum=1.768;QD=3.38;ReadPosRankSum=3.475;VQSLOD=2.5893;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	0/0:2,0:2:2.98:0,3,22	./.	./.	0/1:13,0:10:1.21:1,0,13	0/0:19,0:15:31.98:0,32,317	0/0:6,0:4:5.97:0,6,63	0/0:15,0:14:17.53:0,18,187	1/1:10,0:10:5.30:173,5,0	0/0:7,0:7:15.05:0,15,190	0/0:7,0:5:3.84:0,4,21	0/0:5,0:4:5.97:0,6,58	0/0:9,0:7:20.28:0,20,202	0/0:8,0:4:6.01:0,6,66	0/1:10,0:9:2.78:3,0,44	0/0:9,0:8:17.95:0,18,197	0/0:13,0:6:3.01:0,3,33	0/1:12,0:4:27.56:28,0,28	0/1:7,4:11:99:130,0,101	0/0:10,0:9:10.80:0,11,56	0/0:9,0:7:7.81:0,8,62	0/0:8,0:4:8.86:0,9,91	0/0:10,0:2:2.50:0,2,9	0/1:11,0:3:0.07:0,0,0	0/0:5,0:5:13.28:0,13,151	0/0:19,0:11:32.69:0,33,387	0/0:3,0:2:6.01:0,6,62	0/0:4,0:1:3:0,3,29
chr10	22116122	.	CTG	C	11424.82	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=9.322;DP=657;FS=2.797;HRun=0;HaplotypeScore=205.2260;InbreedingCoeff=0.9660;MQ=58.78;MQ0=4;MQRankSum=-11.285;QD=23.90;ReadPosRankSum=3.742;VQSLOD=5.1747;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,9:17:24.06:292,24,0	1/1:1,5:6:15.52:183,16,0	0/0:38,0:29:66.64:0,67,1023	0/0:44,0:30:74.99:0,75,1099	1/1:10,18:27:27.08:337,27,0	1/1:4,18:22:54.17:671,54,0	1/1:4,14:18:33.11:416,33,0	1/1:11,17:28:54.10:667,54,0	1/1:6,15:20:48.15:579,48,0	1/1:6,23:29:72.22:871,72,0	1/1:3,11:14:21.54:256,22,0	1/1:10,18:28:63.20:776,63,0	1/1:7,15:22:48.13:569,48,0	1/1:3,28:31:73.47:890,73,0	1/1:10,32:42:99:1265,102,0	1/1:5,19:24:57.16:687,57,0	1/1:1,11:12:24.07:296,24,0	1/1:0,3:3:9.03:114,9,0	1/1:6,12:18:39.08:453,39,0	1/1:6,16:22:27.08:331,27,0	1/1:4,15:19:15.52:191,16,0	1/1:1,13:14:27.97:327,28,0	1/1:2,11:13:36.57:435,37,0	1/1:7,11:15:24.08:299,24,0	1/1:7,17:25:44.96:518,45,0	0/0:46,0:46:67.16:0,67,1601	0/0:29,0:28:84.26:0,84,1351	0/0:20,2:22:10.01:0,10,698
chr10	22116137	.	CGTGTGTGTGTGTACGT	C	16657.52	PASS	AC=42;AF=0.778;AN=54;BaseQRankSum=12.144;DP=595;FS=18.577;HRun=0;HaplotypeScore=307.4029;InbreedingCoeff=0.8871;MQ=46.14;MQ0=8;MQRankSum=-8.904;QD=43.15;ReadPosRankSum=4.217;VQSLOD=2.9123;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:13,2:11:8.96:80,9,0	1/1:2,4:6:12.04:491,12,0	0/0:53,0:25:45.14:0,45,1380	0/0:53,0:28:45.15:0,45,1464	1/1:10,10:19:23.95:513,24,0	1/1:14,9:23:21.07:831,21,0	1/1:13,4:17:8.99:190,9,0	0/0:18,0:18:3.01:0,3,48	1/1:4,13:16:33.54:1346,34,0	1/1:11,14:25:42.14:1822,42,0	1/1:3,8:11:23.95:682,24,0	1/1:10,12:22:30.03:1102,30,0	1/1:8,9:18:33.03:1159,33,0	1/1:11,19:30:45.01:1421,45,0	1/1:19,17:36:36.05:1364,36,0	1/1:10,13:23:30.07:1143,30,0	1/1:6,6:12:15.01:536,15,0	./.	1/1:10,5:15:13.29:660,13,0	1/1:10,8:18:23.92:611,24,0	1/1:14,3:17:8.94:131,9,0	1/1:3,10:13:27.01:929,27,0	1/1:2,10:12:23.91:569,24,0	1/1:11,6:14:5.09:264,5,0	1/1:6,13:19:21.03:815,21,0	0/0:36,0:36:87.77:0,88,5677	0/0:29,0:28:78.27:0,78,4347	0/0:15,0:15:36.12:0,36,2677
chr10	22116151	.	CGT	C	6880.59	PASS	AB=0.929;AC=47;AF=0.839;AN=56;BaseQRankSum=10.018;DP=585;FS=27.314;HRun=0;HaplotypeScore=204.1203;InbreedingCoeff=0.7656;MQ=45.02;MQ0=15;MQRankSum=-5.364;QD=16.15;ReadPosRankSum=1.223;VQSLOD=2.8390;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,10:9:9.03:113,9,0	1/1:4,5:9:12.04:142,12,0	0/0:53,0:15:30.09:0,30,399	0/0:53,0:17:10.01:0,10,303	1/1:10,8:18:21.07:258,21,0	1/1:9,10:19:33.07:384,33,0	1/1:4,13:17:15.05:186,15,0	1/1:1,18:19:51.16:642,51,0	1/1:14,7:20:36.58:417,37,0	1/1:14,9:23:67.76:794,68,0	1/1:8,7:15:17.94:214,18,0	1/1:12,14:26:36.11:429,36,0	1/1:12,10:22:36.06:413,36,0	1/1:20,11:31:39.12:463,39,0	1/1:17,7:24:33.10:384,33,0	1/1:13,9:22:30.09:353,30,0	1/1:6,6:12:21.03:239,21,0	1/1:0,5:5:6.02:76,6,0	1/1:6,5:11:27.08:325,27,0	1/1:8,1:9:12.04:139,12,0	1/1:3,11:14:5.32:75,5,0	1/1:10,6:16:21.06:246,21,0	1/1:11,6:16:18.06:218,18,0	1/1:8,12:17:11.72:145,12,0	1/1:13,5:18:18.05:208,18,0	0/0:35,1:36:49.91:0,50,1336	0/1:24,2:26:15.54:16,0,795	0/0:15,0:15:42.13:0,42,660
chr10	22116695	.	TA	T	8341.44	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=16.959;DP=595;FS=0.996;HRun=3;HaplotypeScore=94.0033;InbreedingCoeff=0.9951;MQ=83.41;MQ0=0;MQRankSum=0.644;QD=37.57;ReadPosRankSum=0.853;VQSLOD=4.8108;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,22:22:63.21:878,63,0	1/1:0,6:6:15:186,15,0	0/0:24,1:25:71.05:0,71,907	0/0:11,0:10:30.10:0,30,439	1/1:0,33:33:93.23:1249,93,0	0/0:28,0:28:84.28:0,84,1255	0/0:22,0:22:66.15:0,66,887	1/1:0,35:35:99:1369,105,0	1/1:0,17:17:45.15:628,45,0	0/0:33,0:33:99:0,99,1432	0/0:23,0:23:66.19:0,66,946	0/0:19,0:19:57.18:0,57,819	0/0:34,0:34:99:0,102,1382	0/0:24,0:24:72.24:0,72,1074	1/1:0,23:23:63.21:880,63,0	0/0:23,0:23:69.21:0,69,992	1/1:0,23:23:57.19:785,57,0	1/1:0,8:8:15.05:209,15,0	1/1:0,17:17:51.12:660,51,0	1/1:1,25:26:77.95:994,78,0	1/1:0,12:12:36.12:503,36,0	0/0:25,0:25:75.24:0,75,1101	0/0:18,0:18:54.17:0,54,784	0/0:9,0:8:27.06:0,27,381	0/0:19,0:19:57.18:0,57,833	0/0:25,1:26:36.35:0,36,1080	0/0:24,0:24:72.24:0,72,1067	0/0:10,0:10:30.10:0,30,449
chr10	22117849	.	AT	A	6268.48	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=12.363;DP=628;FS=0.318;HRun=5;HaplotypeScore=60.7066;InbreedingCoeff=0.9973;MQ=83.76;MQ0=0;MQRankSum=-2.215;QD=30.58;ReadPosRankSum=-0.472;VQSLOD=5.0921;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,27:28:78.22:885,78,0	1/1:1,8:9:24.07:272,24,0	0/0:21,0:21:60.18:0,60,784	0/0:16,0:16:45.15:0,45,601	1/1:2,28:30:81.23:919,81,0	0/0:33,0:33:93.29:0,93,1242	0/0:27,0:27:72.24:0,72,985	1/1:2,24:26:72.18:799,72,0	1/1:0,14:14:36.10:408,36,0	0/0:24,0:24:69.23:0,69,944	0/0:28,0:28:84.25:0,84,1104	0/0:22,0:22:66.18:0,66,883	0/0:28,0:28:78.26:0,78,1066	0/0:27,0:27:72.24:0,72,982	0/0:17,0:17:48.16:0,48,657	0/0:22,0:22:66.22:0,66,901	1/1:1,20:21:60.17:680,60,0	1/1:1,7:8:18.05:204,18,0	1/1:2,15:17:45.12:502,45,0	1/1:0,29:29:78.22:885,78,0	1/1:1,22:23:63.18:715,63,0	0/0:32,0:32:96.29:0,96,1280	0/0:19,0:19:51.17:0,51,698	0/0:17,0:17:51.17:0,51,698	0/0:25,0:25:75.24:0,75,1010	0/0:31,0:31:90.29:0,90,1218	0/0:28,0:28:84.28:0,84,1147	0/0:6,0:6:18.06:0,18,246
chr10	22118119	.	AT	A	5347.89	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=15.760;DP=632;FS=12.166;HRun=8;HaplotypeScore=67.4887;InbreedingCoeff=0.9613;MQ=68.80;MQ0=0;MQRankSum=-1.148;QD=25.23;ReadPosRankSum=0.343;VQSLOD=4.7836;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,21:22:60.09:579,60,0	1/1:0,13:13:36.06:348,36,0	0/0:11,0:10:10.73:0,11,170	0/0:11,0:10:1.70:0,2,98	1/1:1,34:35:96.15:926,96,0	0/0:32,0:32:87.26:0,87,1041	0/0:14,0:14:39.10:0,39,459	1/1:8,28:36:84.11:805,84,0	1/1:0,12:12:33.05:319,33,0	0/0:24,0:24:66.20:0,66,797	0/0:32,0:32:90.27:0,90,1077	0/0:26,0:26:75.21:0,75,893	0/0:31,0:31:87.27:0,87,1051	0/0:24,0:24:72.22:0,72,869	0/0:21,0:21:60.18:0,60,725	0/0:21,1:22:37.21:0,37,712	1/1:3,24:27:66.10:637,66,0	1/1:1,7:8:21.03:203,21,0	1/1:3,14:17:42.06:402,42,0	1/1:2,33:35:96.15:927,96,0	1/1:0,7:7:21.03:203,21,0	0/0:28,0:28:81.23:0,81,957	0/0:24,0:24:69.20:0,69,822	0/0:20,0:20:51.16:0,51,616	0/0:27,0:27:75.21:0,75,885	0/0:27,0:26:66.18:0,66,778	0/0:38,0:38:99:0,111,1330	0/0:8,0:8:24.07:0,24,290
chr10	22118514	.	C	CT	10599.39	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=17.042;DP=681;FS=2.486;HRun=1;HaplotypeScore=83.2961;InbreedingCoeff=0.9990;MQ=85.70;MQ0=0;MQRankSum=-5.720;QD=40.46;ReadPosRankSum=-0.431;VQSLOD=5.0893;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,22:22:45.15:674,45,0	1/1:1,13:14:30.10:450,30,0	0/0:23,0:23:69.17:0,69,834	0/0:30,0:30:84.25:0,84,1040	1/1:1,30:31:87.25:1278,87,0	0/0:29,0:29:87.25:0,87,1098	0/0:19,0:19:57.19:0,57,740	1/1:2,35:37:99:1491,105,0	1/1:0,17:17:51.17:764,51,0	0/0:19,0:19:57.18:0,57,735	0/0:28,0:28:81.25:0,81,1036	0/0:26,0:26:78.25:0,78,1011	0/0:28,0:28:84.27:0,84,1086	0/0:25,0:25:72.23:0,72,934	1/1:1,30:31:90.30:1349,90,0	0/0:21,0:21:57.18:0,57,739	1/1:0,24:24:69.23:1034,69,0	1/1:0,7:7:21.07:314,21,0	1/1:0,23:23:69.23:1030,69,0	1/1:3,35:38:99:1497,105,0	1/1:2,16:18:48.16:719,48,0	0/0:19,0:19:57.19:0,57,739	0/0:31,0:31:90.28:0,90,1154	0/0:23,0:23:63.20:0,63,817	0/0:25,0:25:75.23:0,75,960	0/0:22,0:22:66.20:0,66,830	0/0:42,0:42:99:0,123,1595	0/0:9,0:9:24.05:0,24,294
chr10	22119364	.	A	ATG	14436.18	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-18.625;DP=673;FS=8.494;HRun=0;HaplotypeScore=72.9676;InbreedingCoeff=0.9997;MQ=84.46;MQ0=0;MQRankSum=-1.768;QD=54.89;ReadPosRankSum=-0.829;VQSLOD=4.6034;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,41:43:99:2397,120,0	1/1:1,10:11:27.09:549,27,0	0/0:18,0:18:50.97:0,51,741	0/0:22,0:22:57.18:0,57,870	1/1:2,28:31:75.26:1517,75,0	0/0:24,0:24:72.23:0,72,1151	0/0:17,0:17:48.16:0,48,783	1/1:2,35:39:99:2285,117,0	1/1:0,27:28:72:1463,72,0	0/0:24,0:24:69.24:0,69,1126	0/0:25,0:25:75.24:0,75,1199	0/0:32,0:32:96.31:0,96,1536	0/0:31,0:31:87.28:0,87,1394	0/0:24,0:24:72.23:0,72,1145	0/0:25,0:25:75.24:0,75,1199	0/0:16,0:16:48.16:0,48,783	1/1:0,21:22:57.20:1158,57,0	1/1:1,10:11:30:564,30,0	1/1:0,17:17:51.18:1037,51,0	1/1:3,30:33:90.31:1821,90,0	1/1:0,28:28:81.28:1646,81,0	0/0:18,0:18:54.18:0,54,861	0/0:22,0:22:63.18:0,63,992	0/0:31,0:31:90.31:0,90,1466	0/0:24,0:24:72.25:0,72,1166	0/0:25,0:25:69.24:0,69,1122	0/0:21,0:21:63.22:0,63,1024	0/0:11,0:11:33.11:0,33,538
chr10	22120535	.	G	GA	15875.70	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-5.281;DP=654;FS=4.464;HRun=6;HaplotypeScore=65.9330;InbreedingCoeff=0.9901;MQ=87.29;MQ0=0;MQRankSum=-5.051;QD=30.77;ReadPosRankSum=1.744;VQSLOD=5.5969;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,12:13:27.09:336,27,0	1/1:0,11:11:30.10:377,30,0	0/0:28,0:28:78:0,78,772	0/0:22,0:21:50.82:0,51,492	1/1:3,38:41:99:1247,104,0	1/1:5,27:32:75.17:923,75,0	1/1:1,12:13:30.10:377,30,0	1/1:7,31:38:93.24:1137,93,0	1/1:1,13:14:33.11:415,33,0	1/1:1,20:21:60.18:743,60,0	1/1:2,29:31:78.14:944,78,0	1/1:3,28:31:78.25:981,78,0	1/1:4,35:39:96.31:1208,96,0	1/1:1,20:21:51.16:642,51,0	1/1:2,22:24:57.18:717,57,0	1/1:4,20:24:60.16:738,60,0	1/1:0,18:18:48.10:585,48,0	1/1:2,13:15:30.10:377,30,0	1/1:0,14:14:42.11:502,42,0	1/1:3,28:31:72.13:869,72,0	1/1:0,10:10:27.09:340,27,0	1/1:2,22:24:69.22:866,69,0	1/1:4,18:22:55.73:684,56,0	1/1:2,8:10:18.06:226,18,0	1/1:0,19:19:51.16:642,51,0	0/0:48,0:48:99:0,135,1371	0/0:32,0:31:90.20:0,90,917	0/0:8,0:8:12.08:0,12,148
chr10	22121341	.	CA	C	8135.37	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=15.603;DP=650;FS=1.729;HRun=2;HaplotypeScore=64.2955;InbreedingCoeff=0.9967;MQ=83.74;MQ0=0;MQRankSum=-4.126;QD=37.66;ReadPosRankSum=0.199;VQSLOD=5.3505;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,40:40:99:1480,114,0	1/1:0,7:7:21.07:273,21,0	0/0:16,0:16:38.25:0,38,527	0/0:21,0:21:63.20:0,63,884	1/1:0,23:23:66.21:857,66,0	0/0:24,0:24:72.24:0,72,1077	0/0:21,0:21:63.20:0,63,923	1/1:1,29:30:87.24:1087,87,0	1/1:0,26:26:78.25:1013,78,0	0/0:27,0:27:78.26:0,78,1170	0/0:15,0:15:45.15:0,45,675	0/0:26,0:26:78.26:0,78,1169	0/0:32,0:32:96.31:0,96,1393	0/0:33,0:33:93.31:0,93,1388	0/0:33,0:33:99:0,99,1484	0/0:28,0:28:78.26:0,78,1167	1/1:0,19:19:57.19:740,57,0	1/1:0,5:5:15.05:195,15,0	1/1:0,15:15:45.15:582,45,0	1/1:0,29:29:84.27:1091,84,0	1/1:0,22:22:63.20:818,63,0	0/0:20,0:20:60.19:0,60,880	0/0:19,0:19:54.15:0,54,768	0/0:26,0:26:78.26:0,78,1169	0/0:23,0:23:69.23:0,69,1034	0/0:26,0:26:75.25:0,75,1125	0/0:36,0:36:99:0,105,1551	0/0:8,0:8:24.08:0,24,360
chr10	22122629	.	CT	C	894.38	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.580;DP=612;FS=2.599;HRun=10;HaplotypeScore=58.3772;InbreedingCoeff=0.8865;MQ=69.01;MQ0=0;MQRankSum=-0.801;QD=19.03;ReadPosRankSum=2.317;VQSLOD=4.5395;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,16:18:41.99:365,42,0	0/0:5,0:6:14.87:0,15,147	0/0:9,0:9:9.02:0,9,97	0/0:9,1:9:8.60:0,9,66	1/1:4,25:29:74.97:651,75,0	0/0:23,0:23:60.16:0,60,664	0/0:21,0:21:57.15:0,57,631	0/0:32,1:33:55.16:0,55,837	0/0:18,0:20:56.82:0,57,593	0/0:26,2:27:20.05:0,20,654	0/0:25,0:27:74.87:0,75,790	0/0:15,1:16:16.06:0,16,405	0/0:27,1:28:40.03:0,40,637	0/0:29,0:29:81.20:0,81,887	0/0:17,0:17:45.12:0,45,498	0/0:29,0:29:72.19:0,72,797	0/0:29,0:30:84.02:0,84,891	0/0:20,1:21:37.13:0,37,638	0/0:27,0:27:63.17:0,63,697	0/0:28,2:30:32.12:0,32,811	0/0:13,1:14:7.03:0,7,306	0/0:19,0:19:39.09:0,39,423	0/0:20,0:20:51.11:0,51,541	0/0:10,0:11:29.89:0,30,301	0/0:27,1:28:49.15:0,49,770	0/0:28,0:28:64.06:0,64,699	0/0:28,0:29:89.91:0,90,958	0/0:11,0:11:30.04:0,30,318
chr10	22125367	.	A	AT	890.03	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-1.849;DP=688;FS=10.111;HRun=4;HaplotypeScore=94.6035;InbreedingCoeff=0.9914;MQ=82.96;MQ0=0;MQRankSum=-2.916;QD=34.23;ReadPosRankSum=0.154;VQSLOD=3.1851;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:45.13:0,45,510	0/0:12,0:12:36.10:0,36,408	0/0:17,0:17:38.30:0,38,403	0/0:22,0:22:57.09:0,57,621	0/0:41,0:41:99:0,123,1395	0/0:30,0:30:90.26:0,90,1021	0/0:21,0:21:54.14:0,54,601	0/0:36,0:36:96.25:0,96,1071	0/0:24,0:24:66.19:0,66,749	0/0:38,0:38:99:0,111,1252	0/0:36,0:36:99:0,102,1146	0/0:18,0:18:54.15:0,54,613	0/0:21,0:21:60.17:0,60,680	0/0:38,0:38:99:0,111,1259	1/1:1,25:26:72.24:985,72,0	0/0:20,0:20:57.16:0,57,647	0/0:14,0:14:36.10:0,36,408	0/0:20,0:20:60.17:0,60,679	0/0:19,0:19:51.13:0,51,570	0/0:41,0:41:99:0,117,1317	0/0:15,0:15:45.13:0,45,510	0/0:23,0:23:63.18:0,63,713	0/0:23,0:23:63.18:0,63,715	0/0:13,0:13:36.10:0,36,408	0/0:35,0:35:99:0,99,1123	0/0:32,0:32:90.24:0,90,1012	0/0:31,0:31:90.26:0,90,1019	0/0:6,0:6:17.96:0,18,166
chr10	22126072	.	AT	A	11443.60	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=7.500;DP=467;FS=2.205;HRun=5;HaplotypeScore=44.1864;InbreedingCoeff=0.9085;MQ=64.82;MQ0=0;MQRankSum=-0.072;QD=29.57;ReadPosRankSum=1.992;VQSLOD=5.1633;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,21:22:57.16:646,57,0	1/1:0,6:6:18.05:204,18,0	0/0:3,0:3:3.01:0,3,41	0/0:4,0:4:12.04:0,12,155	1/1:1,27:28:78.22:885,78,0	1/1:2,19:21:54.15:613,54,0	1/1:1,15:16:42.12:476,42,0	1/1:1,26:27:78.22:885,78,0	1/1:1,14:15:33.09:374,33,0	1/1:2,14:16:42.11:468,42,0	1/1:0,16:16:45.13:510,45,0	1/1:1,12:13:33.09:374,33,0	1/1:1,16:17:45.13:510,45,0	1/1:3,29:32:72.20:817,72,0	1/1:2,18:20:51.15:579,51,0	1/1:0,14:14:39.11:442,39,0	1/1:1,14:15:36.10:408,36,0	1/1:0,9:9:27.08:306,27,0	1/1:1,13:14:39.07:428,39,0	1/1:2,17:19:51.15:579,51,0	1/1:0,8:8:18.05:204,18,0	1/1:0,8:8:21.06:238,21,0	1/1:0,12:12:32.91:374,33,0	1/1:0,13:13:30.09:340,30,0	1/1:0,26:26:69.20:783,69,0	0/0:22,2:24:4.15:0,4,820	0/0:28,0:28:72.22:0,72,953	0/0:21,0:21:60.12:0,60,776
chr10	22127665	.	T	TG	4642.49	PASS	AB=0.983;AC=39;AF=0.696;AN=56;BaseQRankSum=13.954;DP=669;FS=1.799;HRun=3;HaplotypeScore=99.3802;InbreedingCoeff=0.6172;MQ=88.44;MQ0=0;MQRankSum=-5.305;QD=9.14;ReadPosRankSum=5.123;VQSLOD=2.3437;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:28:41:298,41,0	0/1:10,0:10:40.95:54,0,41	0/0:29,0:29:80.50:0,81,862	0/0:26,0:26:47.70:0,48,654	1/1:31,0:31:35.95:331,36,0	1/1:29,1:29:81.34:360,81,0	1/1:20,0:20:26.16:181,26,0	1/1:29,0:29:47.79:268,48,0	1/1:15,0:15:14.74:127,15,0	1/1:31,0:31:28.80:236,29,0	1/1:27,1:28:13.08:228,13,0	1/1:29,0:29:73.14:306,73,0	1/1:18,0:18:17.92:144,18,0	1/1:34,0:34:12.28:240,12,0	0/0:37,0:37:99:0,108,1294	1/1:31,0:31:49.99:272,50,0	1/1:25,0:25:48.50:256,49,0	1/1:9,0:9:22.23:103,22,0	0/1:16,1:17:42.46:136,0,42	0/1:25,0:25:5:225,0,5	1/1:14,0:14:33.58:163,34,0	0/1:31,1:32:1.06:280,0,1	1/1:21,0:21:27.63:204,28,0	1/1:14,0:14:13.03:127,13,0	0/1:17,0:17:10.30:103,0,10	0/0:31,0:31:78.26:0,78,1032	0/0:26,0:26:78.22:0,78,918	0/0:12,0:12:36.05:0,36,392
chr10	22127668	.	G	GA	16441.03	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-14.243;DP=671;FS=6.619;HRun=6;HaplotypeScore=59.9317;InbreedingCoeff=0.9986;MQ=89.65;MQ0=0;MQRankSum=-5.816;QD=32.62;ReadPosRankSum=2.313;VQSLOD=5.1175;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,24:25:69.22:868,69,0	1/1:3,7:10:21.07:264,21,0	0/0:32,0:32:55.12:0,55,695	0/0:28,0:28:63.06:0,63,623	1/1:2,31:33:90.20:1096,90,0	1/1:2,30:31:90.28:1121,90,0	1/1:1,19:20:54.17:679,54,0	1/1:2,28:30:81.73:1020,82,0	1/1:1,14:15:39.12:491,39,0	1/1:3,28:31:87.24:1073,87,0	1/1:4,24:28:66.21:830,66,0	1/1:0,27:27:81.26:1019,81,0	1/1:1,17:18:45.14:566,45,0	1/1:3,30:33:83.94:1030,84,0	0/0:38,0:38:99:0,111,1118	1/1:1,29:30:81.26:1019,81,0	1/1:1,24:25:69.22:868,69,0	1/1:0,8:8:24.08:302,24,0	1/1:8,8:16:33.04:364,33,0	1/1:2,23:26:69.09:814,69,0	1/1:1,13:14:36.12:453,36,0	1/1:5,25:30:78.25:979,78,0	1/1:1,22:23:54.17:679,54,0	1/1:1,13:14:39.12:491,39,0	1/1:2,14:16:33.11:415,33,0	0/0:29,1:30:52.46:0,52,850	0/0:27,0:27:78.14:0,78,781	0/0:12,0:12:36.08:0,36,367
chr10	22129034	.	C	CAGAA	605.08	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.884;DP=770;FS=25.558;HRun=0;HaplotypeScore=287.2938;InbreedingCoeff=0.9047;MQ=88.69;MQ0=0;MQRankSum=-4.361;QD=40.34;ReadPosRankSum=0.173;VQSLOD=2.6988;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,9:15:30.51:699,31,0	0/0:12,0:12:33.09:0,33,612	0/0:41,0:41:99:0,117,2129	0/0:26,0:26:66.13:0,66,1200	0/0:32,0:32:93.30:0,93,1821	0/0:26,0:26:75.26:0,75,1491	0/0:32,0:32:75.26:0,75,1497	0/0:45,0:44:99:0,132,2517	0/0:29,0:29:72.23:0,72,1424	0/0:20,0:20:60.18:0,60,1080	0/0:27,0:27:75.24:0,75,1449	0/0:19,0:19:54.19:0,54,1077	0/0:41,0:41:99:0,102,1997	0/0:32,0:32:54.16:0,54,1043	0/0:42,0:42:99:0,114,2170	0/0:31,0:31:84.27:0,84,1637	0/0:36,0:36:99:0,105,2084	0/0:20,0:20:54.18:0,54,1056	0/0:22,0:22:60.20:0,60,1145	0/0:17,0:17:45.15:0,45,886	0/0:41,0:41:99:0,123,2380	0/0:20,0:20:57.18:0,57,1093	0/0:29,0:29:72.24:0,72,1433	0/0:23,0:23:57.19:0,57,1137	0/0:28,0:28:81.25:0,81,1547	0/0:23,0:23:63.22:0,63,1236	0/0:37,0:37:99:0,99,1938	0/0:4,0:4:6.02:0,6,120
chr10	22129038	.	G	GAACC	494.90	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.919;DP=740;FS=19.585;HRun=0;HaplotypeScore=301.9277;InbreedingCoeff=0.9016;MQ=85.22;MQ0=0;MQRankSum=-4.514;QD=41.24;ReadPosRankSum=1.030;VQSLOD=2.8527;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,9:12:21.90:587,22,0	0/0:10,0:10:30.06:0,30,586	0/0:35,0:35:99:0,105,2140	0/0:23,0:23:63.18:0,63,1267	0/0:32,0:32:93.32:0,93,1935	0/0:25,0:25:75.22:0,75,1516	0/0:33,0:33:75.26:0,75,1572	0/0:45,0:44:99:0,132,2690	0/0:28,0:28:84.12:0,84,1553	0/0:17,0:17:51.15:0,51,1029	0/0:24,0:24:72.25:0,72,1484	0/0:21,0:21:57.06:0,57,1152	0/0:40,0:40:99:0,117,2190	0/0:30,0:30:77.89:0,78,1249	0/0:38,0:38:99:0,108,2220	0/0:33,0:33:90.14:0,90,1703	0/0:36,0:36:99:0,108,2179	0/0:22,0:22:57.14:0,57,1193	0/0:21,0:21:63.16:0,63,1227	0/0:16,0:16:45.11:0,45,901	0/0:38,0:38:99:0,111,2251	0/0:19,0:19:57.15:0,57,1153	0/0:27,0:27:75.26:0,75,1572	0/0:23,0:23:60.16:0,60,1214	0/0:29,0:29:78.27:0,78,1634	0/0:23,0:23:66.18:0,66,1341	0/0:36,0:36:99:0,99,1990	0/0:4,0:4:6.02:0,6,126
chr10	22129100	.	G	GT	13599.63	PASS	AC=52;AF=1.000;AN=52;BaseQRankSum=-0.206;DP=588;FS=0.000;HRun=0;HaplotypeScore=261.2959;InbreedingCoeff=-0.0333;MQ=35.26;MQ0=0;MQRankSum=0.676;QD=23.13;ReadPosRankSum=2.029;VQSLOD=4.0030;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,18:19:12.04:191,12,0	1/1:0,4:4:3.01:48,3,0	./.	./.	1/1:2,17:19:9.02:143,9,0	1/1:0,20:20:18.06:287,18,0	1/1:2,20:22:24.08:382,24,0	1/1:2,41:43:99:1943,125,0	1/1:1,22:23:30.06:451,30,0	1/1:4,14:18:44.96:678,45,0	1/1:0,16:16:0.57:44,1,0	1/1:4,19:23:30.10:478,30,0	1/1:3,41:45:69.24:1099,69,0	1/1:2,36:38:69.24:1100,69,0	1/1:3,32:35:39.13:622,39,0	1/1:3,40:43:63.21:1004,63,0	1/1:0,22:22:27.09:431,27,0	1/1:1,8:9:18.06:287,18,0	1/1:1,12:13:36.09:547,36,0	1/1:2,15:17:21.07:335,21,0	1/1:1,9:10:6:96,6,0	1/1:3,19:22:13.43:325,13,0	1/1:1,16:17:18.09:287,18,0	1/1:1,13:14:12.04:191,12,0	1/1:2,19:21:21.07:335,21,0	1/1:2,30:32:87.30:1386,87,0	1/1:3,35:38:54.18:861,54,0	1/1:0,5:5:3.01:48,3,0
chr10	22129777	.	GACATAT	G	680.74	PASS	AB=0.757;AC=8;AF=0.182;AN=44;BaseQRankSum=3.531;DP=346;FS=18.222;HRun=0;HaplotypeScore=101.6310;InbreedingCoeff=0.5290;MQ=68.61;MQ0=1;MQRankSum=-5.201;QD=13.61;ReadPosRankSum=0.856;VQSLOD=1.6028;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:27.04:0,27,518	0/0:4,0:4:12.01:0,12,305	0/0:11,0:8:1.28:0,1,105	0/0:11,0:7:12.29:0,12,88	0/0:10,0:10:18.03:0,18,376	1/1:6,0:6:5.99:50,6,0	1/1:2,2:3:2.94:18,3,0	0/0:38,0:38:56.83:0,57,1791	0/0:14,0:14:27.09:0,27,820	1/1:1,6:7:5.34:238,5,0	0/0:2,4:6:0:0,0,0	./.	0/1:17,2:19:0.92:375,0,1	./.	0/0:15,0:15:21.07:0,21,480	0/1:5,9:14:25.54:121,0,26	0/0:11,0:11:21.07:0,21,612	0/0:22,0:22:48.12:0,48,1296	0/0:15,0:13:12.03:0,12,255	0/0:24,0:24:60.15:0,60,1544	0/0:4,0:4:6.02:0,6,190	./.	./.	./.	./.	0/0:12,0:12:24.08:0,24,619	0/0:15,0:15:45.12:0,45,1163	0/0:8,0:8:18.03:0,18,403
chr10	22129791	.	C	CAT	420.96	PASS	AB=1.000;AC=6;AF=0.150;AN=40;BaseQRankSum=3.190;DP=323;FS=6.234;HRun=0;HaplotypeScore=81.4110;InbreedingCoeff=0.5654;MQ=57.02;MQ0=3;MQRankSum=-1.731;QD=8.59;ReadPosRankSum=1.909;VQSLOD=2.5407;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,15:21:21.03:317,21,0	0/0:4,0:4:9.03:0,9,113	0/0:14,0:6:11.98:0,12,124	0/0:16,0:6:5.01:0,5,42	1/1:2,4:6:12.04:198,12,0	./.	./.	0/0:41,0:40:87.24:0,87,1049	0/0:12,0:12:27.09:0,27,337	0/0:8,0:8:15.32:0,15,106	0/1:6,0:6:0:0,0,0	./.	0/1:16,0:16:18.30:21,0,18	./.	0/0:12,0:12:18.06:0,18,225	0/0:13,0:13:2.20:0,2,28	0/0:11,0:11:21.01:0,21,243	0/0:19,0:19:42.09:0,42,508	0/0:9,0:7:12.04:0,12,162	0/0:22,0:22:51.16:0,51,637	0/0:2,0:2:6.02:0,6,75	./.	./.	./.	./.	0/0:11,0:11:27.06:0,27,322	0/0:16,0:16:39.11:0,39,470	0/0:7,0:7:12.04:0,12,146
chr10	22129795	.	T	TACAC	708.62	PASS	AC=10;AF=0.238;AN=42;BaseQRankSum=5.032;DP=312;FS=26.258;HRun=0;HaplotypeScore=86.7313;InbreedingCoeff=0.8159;MQ=56.70;MQ0=3;MQRankSum=-6.331;QD=15.08;ReadPosRankSum=0.873;VQSLOD=1.2801;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:19.86:0,20,108	0/0:4,0:4:11.63:0,12,189	0/0:14,0:6:16.65:0,17,199	0/0:16,0:6:8.69:0,9,59	0/0:4,0:4:11.70:0,12,69	1/1:6,0:6:2.96:25,3,0	1/1:4,0:2:2.97:20,3,0	0/0:36,0:35:74.41:0,74,1807	0/0:13,0:13:27.09:0,27,538	1/1:8,0:8:15.87:185,16,0	./.	./.	1/1:11,5:16:30.06:481,30,0	./.	0/0:12,0:12:21.07:0,21,409	1/1:11,2:13:8.99:139,9,0	0/0:11,0:11:21.07:0,21,414	0/0:19,0:19:48.15:0,48,901	0/0:9,0:7:18.02:0,18,297	0/0:20,0:20:57.18:0,57,1085	0/0:2,0:2:6.02:0,6,120	./.	./.	./.	./.	0/0:10,0:10:30:0,30,546	0/0:15,0:15:42.12:0,42,780	0/0:7,0:7:12.04:0,12,219
chr10	22129805	.	C	CAT	264.61	PASS	AB=1.000;AC=10;AF=0.250;AN=40;BaseQRankSum=6.033;DP=290;FS=11.661;HRun=0;HaplotypeScore=77.3092;InbreedingCoeff=0.6572;MQ=51.02;MQ0=6;MQRankSum=-3.927;QD=4.34;ReadPosRankSum=1.118;VQSLOD=1.4316;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:19,0:19:2.02:11,0,2	0/0:3,0:3:9.03:0,9,109	0/0:15,0:5:11.98:0,12,131	0/0:15,0:4:2.99:0,3,23	1/1:5,0:5:3.75:15,4,0	./.	./.	0/0:43,0:39:80.43:0,80,912	0/0:10,0:10:24.07:0,24,290	1/1:7,0:7:2.15:40,2,0	0/1:4,0:4:0:0,0,0	./.	1/1:8,5:13:23.73:262,24,0	./.	0/0:10,0:10:12.04:0,12,164	1/1:10,2:13:8.18:63,8,0	0/0:13,0:13:14:0,14,182	0/0:17,0:17:42:0,42,459	0/0:9,0:7:11.49:0,11,154	0/0:18,0:18:45.14:0,45,552	0/0:2,0:2:6.02:0,6,73	./.	./.	./.	./.	0/0:9,0:9:21.07:0,21,284	0/0:13,0:13:33.08:0,33,420	0/0:7,0:6:14.91:0,15,170
chr10	22129807	.	T	TAC	459.90	PASS	AC=6;AF=0.158;AN=38;BaseQRankSum=5.690;DP=286;FS=24.690;HRun=0;HaplotypeScore=75.9303;InbreedingCoeff=0.8171;MQ=50.66;MQ0=8;MQRankSum=-5.707;QD=13.94;ReadPosRankSum=1.521;VQSLOD=1.7058;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:14.56:0,15,112	0/0:3,0:3:9.03:0,9,136	0/0:14,0:4:11.99:0,12,154	0/0:15,0:4:5.95:0,6,49	0/0:6,0:6:11.46:0,11,79	./.	./.	0/0:43,0:39:99:0,117,1479	0/0:10,0:10:24.08:0,24,364	1/1:6,1:7:10.55:139,11,0	./.	./.	1/1:7,6:13:24.07:356,24,0	./.	0/0:8,0:8:12.04:0,12,182	1/1:13,0:13:8.91:87,9,0	0/0:13,0:13:24.04:0,24,306	0/0:17,0:17:42.14:0,42,617	0/0:9,0:6:17.09:0,17,234	0/0:17,0:17:48.15:0,48,706	0/0:2,0:2:6.02:0,6,90	./.	./.	./.	./.	0/0:9,0:9:24.07:0,24,347	0/0:12,0:12:33.11:0,33,498	0/0:8,0:6:14.50:0,15,161
chr10	22129829	.	TAC	T	76.79	PASS	AB=1.000;AC=8;AF=0.267;AN=30;BaseQRankSum=-2.888;DP=236;FS=0.000;HRun=0;HaplotypeScore=67.2443;InbreedingCoeff=0.4331;MQ=39.12;MQ0=13;MQRankSum=2.888;QD=1.28;ReadPosRankSum=0.957;VQSLOD=0.7402;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:15:2.68:11,3,0	./.	./.	./.	0/0:6,0:6:11.98:0,12,96	./.	./.	0/0:47,0:42:14.48:0,14,303	0/0:10,0:10:20.20:0,20,132	0/0:4,0:4:5.56:0,6,30	./.	./.	0/0:11,0:11:5.90:0,6,37	./.	./.	0/0:9,0:9:2.84:0,3,18	0/1:14,0:14:8.90:9,0,103	0/0:10,0:10:14.74:0,15,97	0/1:13,0:9:1:1,0,113	0/0:10,0:10:17.99:0,18,168	./.	./.	./.	./.	0/0:6,0:6:0:0,0,0	1/1:3,4:7:8.61:70,9,0	1/1:9,0:9:8.03:90,8,0	0/0:6,0:4:2.22:0,2,7
chr10	22129831	.	C	CATACATACAT	367.54	PASS	AB=1.000;AC=11;AF=0.306;AN=36;BaseQRankSum=2.796;DP=229;FS=5.689;HRun=0;HaplotypeScore=85.7906;InbreedingCoeff=0.5535;MQ=38.41;MQ0=14;MQRankSum=-1.700;QD=7.07;ReadPosRankSum=-1.289;VQSLOD=1.0516;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:13:8.60:84,9,0	0/0:1,0:1:3:0,3,25	0/0:7,0:2:6:0,6,94	./.	0/1:6,0:6:11.08:11,0,119	./.	1/1:3,0:1:2.74:12,3,0	0/0:46,0:42:69.99:0,70,1021	0/0:9,0:9:17.65:0,18,410	0/1:4,0:4:0.24:90,0,0	./.	./.	1/1:10,0:10:15.05:235,15,0	./.	./.	1/1:8,0:8:5.75:60,6,0	0/0:14,0:14:23.49:0,23,362	0/0:10,0:10:17.86:0,18,366	0/0:13,0:9:4.83:0,5,366	0/0:10,0:10:24.08:0,24,678	./.	./.	./.	./.	0/1:6,0:6:0:0,0,0	0/0:7,0:7:18.05:0,18,433	0/0:7,0:7:15.05:0,15,378	0/0:6,0:4:6.45:0,6,76
chr10	22129860	.	A	ATATATATATATG	2825.33	PASS	AB=1.000;AC=16;AF=0.667;AN=24;BaseQRankSum=-2.856;DP=149;FS=4.970;HRun=0;HaplotypeScore=60.7917;InbreedingCoeff=0.4328;MQ=56.38;MQ0=7;MQRankSum=-2.171;QD=28.54;ReadPosRankSum=1.251;VQSLOD=1.7438;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:11:11.60:0,12,217	./.	0/0:5,0:3:2.49:0,2,12	0/1:4,0:2:0.03:0,0,0	0/0:4,0:4:5.99:0,6,48	./.	./.	1/1:39,0:37:70.96:1216,71,0	1/1:0,3:4:3.01:178,3,0	./.	./.	./.	./.	./.	./.	./.	1/1:4,7:12:14.54:655,15,0	1/1:3,5:8:3.01:179,3,0	1/1:11,0:13:18.41:433,18,0	1/1:6,0:6:9:96,9,0	./.	./.	./.	./.	./.	1/1:4,0:4:2.99:24,3,0	./.	0/1:6,0:4:38.88:148,0,39
chr10	22131352	.	TA	T	5297.89	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-3.208;DP=544;FS=8.895;HRun=9;HaplotypeScore=75.6236;InbreedingCoeff=0.9910;MQ=69.68;MQ0=0;MQRankSum=0.400;QD=22.74;ReadPosRankSum=3.688;VQSLOD=5.5213;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:33.10:0,33,381	0/0:2,0:13:28.41:0,28,144	0/0:6,0:5:12.04:0,12,139	0/0:12,0:12:21.69:0,22,218	0/0:27,0:27:75.22:0,75,865	1/1:1,23:24:60.03:549,60,0	1/1:2,8:10:18.01:165,18,0	0/0:13,0:51:99:0,108,592	0/0:0,0:8:22.76:0,23,115	1/1:3,22:25:60.02:549,60,0	1/1:4,23:27:63.02:576,63,0	1/1:1,24:25:69.03:632,69,0	1/1:2,22:24:60.03:549,60,0	1/1:2,17:19:48.02:439,48,0	0/0:18,0:18:45.12:0,45,511	1/1:2,16:18:48.03:439,48,0	0/0:2,0:18:48.63:0,49,286	0/0:3,0:16:42.52:0,43,232	0/0:9,0:18:49.64:0,50,407	0/0:2,0:23:57.59:0,58,303	0/0:1,0:12:28.56:0,29,153	1/1:1,9:10:27.01:246,27,0	1/1:1,21:22:57.03:522,57,0	1/1:1,8:9:18.01:165,18,0	1/1:1,19:20:51.03:467,51,0	0/0:25,0:25:66.20:0,66,762	0/0:40,0:38:99:0,108,1222	0/0:8,0:8:18.04:0,18,198
chr10	22132568	.	G	GAT	3055.12	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=7.959;DP=638;FS=1.470;HRun=0;HaplotypeScore=117.1227;InbreedingCoeff=0.9967;MQ=76.61;MQ0=0;MQRankSum=-1.395;QD=36.81;ReadPosRankSum=1.058;VQSLOD=5.6302;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:63.20:0,63,902	0/0:10,0:10:30.10:0,30,439	0/0:21,0:21:56.20:0,56,750	0/0:18,0:17:27.12:0,27,485	0/0:32,0:32:90.29:0,90,1304	0/0:26,0:24:68.46:0,68,486	0/0:20,0:20:53.57:0,54,383	0/0:34,0:34:90.22:0,90,1233	0/0:19,0:18:48.15:0,48,685	0/0:32,0:32:85.38:0,85,528	0/0:22,0:22:37.53:0,38,393	0/0:28,0:28:57.94:0,58,472	0/0:32,0:32:45.42:0,45,586	0/0:24,0:24:40.57:0,41,420	1/1:2,23:25:60.20:978,60,0	0/0:37,0:37:61.80:0,62,632	0/0:20,0:20:57.18:0,57,819	0/0:22,0:22:50.88:0,51,726	0/0:12,0:12:33.10:0,33,467	0/0:26,0:26:63.21:0,63,925	0/0:29,0:29:84.27:0,84,1214	0/0:17,0:17:44.58:0,45,312	0/0:19,0:19:28.68:0,29,337	0/0:11,0:11:29.82:0,30,217	0/0:22,0:22:62.44:0,62,435	1/1:12,17:29:30.54:1078,31,0	1/1:7,16:23:53.66:858,54,0	1/1:0,6:6:18.06:301,18,0
chr10	22132639	.	C	CTATG	12566.84	PASS	AB=0.585;AC=23;AF=0.411;AN=56;BaseQRankSum=-10.731;DP=664;FS=0.343;HRun=0;HaplotypeScore=116.5490;InbreedingCoeff=0.9215;MQ=64.96;MQ0=0;MQRankSum=-4.593;QD=43.19;ReadPosRankSum=-0.756;VQSLOD=4.6465;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:51.65:0,52,853	1/1:0,7:7:21.07:502,21,0	0/0:24,0:22:39.12:0,39,608	0/0:18,0:16:12.99:0,13,263	0/0:38,0:37:93.30:0,93,1518	0/0:25,0:25:66.23:0,66,1086	0/0:20,0:20:45.14:0,45,724	1/1:29,20:51:78.25:1783,78,0	1/1:11,18:28:51.18:1211,51,0	0/0:28,0:29:57.19:0,57,930	0/0:22,0:22:57.65:0,58,919	0/0:21,0:21:39.13:0,39,651	0/0:23,0:23:63.22:0,63,1053	0/0:18,0:18:51.15:0,51,801	1/1:8,13:21:51.18:1221,51,0	0/0:32,0:32:75.26:0,75,1255	1/1:9,13:22:39.13:962,39,0	1/1:9,13:22:36.12:886,36,0	1/1:10,8:22:39.09:782,39,0	1/1:11,22:33:48.16:1190,48,0	1/1:7,14:21:42.14:1039,42,0	0/0:19,0:19:45.15:0,45,745	0/0:28,0:28:78.25:0,78,1284	0/0:14,0:14:36.11:0,36,578	0/0:17,0:17:42.14:0,42,705	0/1:7,17:24:43.59:1207,0,44	1/1:7,16:24:51.18:1262,51,0	1/1:8,7:15:21.07:520,21,0
chr10	22132757	.	C	CTT	8893.65	PASS	AB=1.000;AC=35;AF=0.625;AN=56;BaseQRankSum=-9.635;DP=473;FS=4.868;HRun=9;HaplotypeScore=57.0812;InbreedingCoeff=0.8775;MQ=82.25;MQ0=0;MQRankSum=-1.344;QD=29.65;ReadPosRankSum=2.929;VQSLOD=4.9090;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,0:27:27.92:105,28,0	0/0:5,0:5:15.04:0,15,160	0/1:15,0:15:16.38:16,0,84	0/0:13,0:13:21.80:0,22,203	0/0:23,0:23:63.09:0,63,644	1/1:1,16:18:42.14:647,42,0	1/1:2,12:14:27.09:416,27,0	0/0:32,0:32:63.10:0,63,658	0/0:21,0:21:48.10:0,48,511	1/1:4,21:25:65.81:978,66,0	1/1:2,21:25:68.97:907,69,0	1/1:3,12:15:33.11:493,33,0	1/1:1,14:15:35.85:537,36,0	1/1:2,13:15:26.88:415,27,0	1/1:3,13:17:33.11:508,33,0	1/1:0,14:14:36.12:554,36,0	0/0:13,0:13:33.02:0,33,332	0/0:14,0:14:33.08:0,33,351	0/0:20,0:20:57.13:0,57,595	0/0:26,0:26:66.09:0,66,679	0/0:6,0:6:12.03:0,12,128	1/1:0,12:12:36.08:518,36,0	1/1:2,20:23:48.16:722,48,0	1/1:0,3:3:6.02:92,6,0	1/1:0,13:15:23.57:332,24,0	1/1:2,26:29:80.76:1209,81,0	1/1:2,10:12:27.09:416,27,0	1/1:2,0:6:3:29,3,0
chr10	22133598	.	G	GTT	8635.33	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=9.566;DP=609;FS=1.092;HRun=9;HaplotypeScore=150.9407;InbreedingCoeff=0.9820;MQ=70.93;MQ0=4;MQRankSum=-11.122;QD=25.93;ReadPosRankSum=-2.007;VQSLOD=2.8086;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:18:37.29:137,37,0	0/0:13,0:13:30.82:0,31,303	0/0:38,0:22:34.03:0,34,365	0/0:22,0:14:20.61:0,21,192	0/0:40,0:40:99:0,111,1178	1/1:7,12:20:48.62:666,49,0	1/1:2,4:8:24.06:331,24,0	0/0:33,0:33:78.03:0,78,808	0/0:21,0:21:60.15:0,60,637	1/1:6,11:20:48.60:645,49,0	1/1:8,17:27:63.02:777,63,0	1/1:10,5:15:32.49:337,32,0	1/1:17,6:23:55.57:679,56,0	1/1:9,5:14:27.03:304,27,0	1/1:3,24:28:47.99:721,48,0	1/1:11,8:19:36.12:521,36,0	0/0:22,0:22:59.97:0,60,619	0/0:23,0:23:63.49:0,63,649	0/0:25,0:25:60.14:0,60,634	0/0:34,0:34:84.64:0,85,883	0/0:5,0:5:12.01:0,12,118	1/1:5,13:19:54.16:753,54,0	1/1:9,9:19:47.60:600,48,0	1/1:3,2:5:12.45:125,12,0	1/1:13,15:29:72.20:1014,72,0	1/1:16,1:26:61.95:507,62,0	1/1:4,0:34:45.07:431,45,0	1/1:2,0:7:9.01:86,9,0
chr10	22133608	.	G	GT	3490.49	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=10.665;DP=590;FS=6.758;HRun=9;HaplotypeScore=144.6136;InbreedingCoeff=0.9410;MQ=69.26;MQ0=6;MQRankSum=-9.970;QD=16.23;ReadPosRankSum=-4.595;VQSLOD=1.4499;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:23:41.46:0,41,246	0/0:12,0:12:30.05:0,30,289	0/0:43,0:25:11.32:0,11,354	0/0:18,0:10:17.48:0,17,144	0/0:38,0:38:99:0,108,1036	1/1:11,8:20:30.28:352,30,0	1/1:5,5:10:21.98:223,22,0	0/0:30,0:30:72.10:0,72,690	0/0:24,0:24:66.10:0,66,637	1/1:11,6:17:20.79:236,21,0	1/1:17,8:25:13.90:276,14,0	1/1:14,4:18:20.94:236,21,0	1/1:17,7:24:42.15:356,42,0	1/1:6,12:18:3.65:192,4,0	0/0:25,0:25:53.82:0,54,423	1/1:6,8:14:22.32:334,22,0	0/0:22,0:22:60.04:0,60,569	0/0:25,0:25:69.11:0,69,664	0/0:20,0:20:54.08:0,54,522	0/0:31,0:31:87.12:0,87,833	0/0:5,0:5:15.02:0,15,145	1/1:10,13:23:52.39:568,52,0	1/1:12,8:19:23.64:333,24,0	1/1:2,2:4:6.16:44,6,0	1/1:13,8:22:27.48:340,27,0	0/0:25,0:25:28.94:0,29,229	0/0:30,0:30:48.84:0,49,319	0/0:3,0:3:8.85:0,9,57
chr10	22133615	.	TC	T	2613.82	PASS	AB=1.000;AC=25;AF=0.446;AN=56;BaseQRankSum=12.694;DP=588;FS=2.357;HRun=1;HaplotypeScore=137.4612;InbreedingCoeff=0.9149;MQ=70.23;MQ0=6;MQRankSum=-9.799;QD=10.76;ReadPosRankSum=-5.876;VQSLOD=-0.5354;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:23:53.51:0,54,704	0/0:12,0:12:36.09:0,36,457	0/0:42,0:25:44.48:0,44,535	0/0:17,0:11:27.01:0,27,291	0/0:40,0:40:99:0,120,1524	1/1:23,1:24:52.58:350,53,0	1/1:11,0:11:26.32:145,26,0	0/0:26,0:26:78.22:0,78,981	0/0:23,0:23:69.21:0,69,915	1/1:16,1:17:42.35:220,42,0	1/1:22,0:22:39.44:245,39,0	1/1:18,0:18:46.46:286,46,0	1/1:20,1:21:43.75:254,44,0	1/1:17,1:18:20.96:154,21,0	0/0:22,0:22:60.17:0,60,780	1/1:16,0:16:37.85:231,38,0	0/0:22,0:22:66.17:0,66,860	0/0:23,0:23:69.22:0,69,925	0/0:19,0:19:57.17:0,57,759	0/0:32,0:32:96.12:0,96,1165	0/0:6,0:6:18.05:0,18,229	1/1:24,0:24:54.93:283,55,0	1/1:18,1:18:30.14:178,30,0	1/1:5,0:5:8.75:49,9,0	1/1:23,0:23:50.14:288,50,0	0/1:25,0:25:99:157,0,389	0/0:31,0:31:62.96:0,63,737	0/0:5,0:5:15.02:0,15,170
chr10	22134117	.	CTTTT	C	7790	PASS	AB=1.000;AC=25;AF=0.446;AN=56;BaseQRankSum=13.005;DP=605;FS=5.942;HRun=14;HaplotypeScore=141.0098;InbreedingCoeff=0.9222;MQ=68.34;MQ0=0;MQRankSum=-5.334;QD=28.64;ReadPosRankSum=10.708;VQSLOD=1.7079;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:41:60.20:0,60,1144	0/0:5,0:5:15.05:0,15,320	0/0:14,0:12:21.07:0,21,387	0/1:13,0:12:10.55:11,0,120	0/0:18,0:24:66.19:0,66,1214	1/1:3,17:21:42.05:575,42,0	1/1:4,0:19:41.84:331,42,0	0/0:40,0:42:99:0,99,1851	0/0:19,0:19:51.16:0,51,1050	1/1:3,17:20:48.04:659,48,0	1/1:5,10:15:27:381,27,0	1/1:3,24:28:70.16:996,70,0	1/1:5,24:30:66.12:915,66,0	1/1:2,17:20:45.10:618,45,0	0/0:13,0:29:59.93:0,60,698	1/1:6,23:31:67.36:917,67,0	0/0:21,0:20:45.13:0,45,901	0/0:14,0:16:42.12:0,42,809	0/0:21,0:22:48.16:0,48,1019	0/0:12,0:18:45.15:0,45,869	0/0:10,0:12:27.07:0,27,544	1/1:1,13:15:36.04:480,36,0	1/1:4,10:14:8.97:311,9,0	1/1:3,17:20:48.12:679,48,0	1/1:3,22:26:66.13:915,66,0	0/0:14,0:22:62.94:0,63,757	0/0:16,0:36:66.16:0,66,801	0/0:5,0:11:29.91:0,30,393
chr10	22135350	.	GCA	G	619.01	PASS	AB=0.942;AC=7;AF=0.125;AN=56;BaseQRankSum=7.539;DP=687;FS=4.005;HRun=0;HaplotypeScore=140.4063;InbreedingCoeff=0.5154;MQ=67.45;MQ0=3;MQRankSum=0.364;QD=4.02;ReadPosRankSum=2.272;VQSLOD=2.8510;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:54,0:54:28.43:425,28,0	0/0:13,0:13:27.08:0,27,322	0/0:17,0:9:0.47:0,0,1	0/0:15,0:9:8.98:0,9,76	0/0:21,0:20:42.11:0,42,496	0/0:19,0:19:48.12:0,48,562	0/0:34,0:34:45.36:0,45,670	0/1:27,1:28:12.03:12,0,304	0/0:24,0:24:39.07:0,39,441	0/0:26,1:27:13.94:0,14,493	0/0:15,0:15:24.06:0,24,266	0/0:25,0:25:54.10:0,54,596	0/0:33,1:34:49.95:0,50,858	0/0:35,2:37:9.83:0,10,782	1/1:33,0:32:33.79:297,34,0	0/0:16,0:16:24.07:0,24,277	0/1:22,2:24:17.23:17,0,472	0/0:25,1:26:25.92:0,26,601	0/0:19,0:19:21.06:0,21,235	0/0:17,0:17:30.08:0,30,338	0/0:47,2:49:71.11:0,71,1135	0/0:21,0:21:48.12:0,48,560	0/1:14,1:15:4.17:4,0,297	0/0:31,0:31:42.10:0,42,470	0/0:21,0:20:36.08:0,36,407	0/0:24,0:23:50.88:0,51,407	0/0:19,0:19:17.96:0,18,145	0/0:9,0:9:18.43:0,18,146
chr10	22135362	.	A	ACACG	2003.52	PASS	AB=1.000;AC=8;AF=0.143;AN=56;BaseQRankSum=-6.603;DP=731;FS=6.564;HRun=0;HaplotypeScore=176.1356;InbreedingCoeff=0.6251;MQ=62.37;MQ0=3;MQRankSum=1.462;QD=18.05;ReadPosRankSum=-0.272;VQSLOD=2.8710;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:11.88:0,12,310	0/0:11,0:11:32.76:0,33,491	0/1:24,0:9:10.36:10,0,47	0/0:25,0:13:21.87:0,22,233	0/0:22,0:21:56.78:0,57,765	0/0:21,0:21:59.62:0,60,858	0/0:37,0:37:90.04:0,90,1053	0/0:27,0:28:40.29:0,40,582	0/0:21,0:21:53.21:0,53,696	0/0:26,0:26:67.94:0,68,885	0/0:16,0:16:38.48:0,38,418	0/0:27,0:26:71.17:0,71,897	0/0:37,0:37:99:0,110,1354	0/0:35,0:35:97.95:0,98,1368	0/1:37,0:36:1.27:1,0,223	0/0:24,0:24:55.57:0,56,569	0/0:26,0:26:67.84:0,68,797	0/0:26,0:26:69.51:0,70,982	0/0:20,0:20:46.54:0,47,496	0/0:19,0:19:49.79:0,50,569	0/0:58,0:58:99:0,166,2030	0/0:23,0:23:61.77:0,62,767	0/0:14,0:14:39.22:0,39,510	0/0:31,0:31:70.69:0,71,833	0/0:20,0:19:34.95:0,35,556	1/1:2,19:23:62.60:1255,63,0	1/1:4,11:17:1.44:398,1,0	1/1:1,7:9:4.07:466,4,0
chr10	22135552	.	GA	G	4437.32	PASS	AB=0.918;AC=23;AF=0.411;AN=56;BaseQRankSum=8.318;DP=623;FS=1.889;HRun=11;HaplotypeScore=69.4902;InbreedingCoeff=0.7697;MQ=69.99;MQ0=0;MQRankSum=0.516;QD=15.52;ReadPosRankSum=2.345;VQSLOD=5.6845;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,26:31:67.95:548,68,0	1/1:0,8:8:20.98:172,21,0	0/1:14,1:14:11.19:11,0,74	0/1:10,1:8:10.19:10,0,87	1/1:4,20:25:58.95:473,59,0	0/0:23,0:25:71.84:0,72,725	0/0:17,0:18:29.32:0,29,501	1/1:8,31:41:91.81:732,92,0	1/1:3,17:20:50.85:411,51,0	0/1:23,3:26:7.78:8,0,533	0/0:29,0:29:78.19:0,78,825	0/0:19,0:19:48.11:0,48,505	0/0:27,0:27:75.18:0,75,794	0/0:31,1:32:32.44:0,32,524	0/0:25,1:26:35.51:0,36,577	0/0:23,0:24:56.29:0,56,626	1/1:1,18:21:51.23:403,51,0	1/1:2,20:23:55.97:449,56,0	1/1:5,16:21:47.92:394,48,0	1/1:2,21:23:56.83:456,57,0	1/1:3,17:20:44.93:369,45,0	0/0:14,0:16:38.93:0,39,397	0/0:15,2:18:1.73:0,2,413	0/0:28,0:28:75.18:0,75,793	0/0:15,0:15:18.13:0,18,334	0/0:7,0:24:49.95:0,50,297	0/0:8,0:22:49.06:0,49,312	0/0:3,0:14:34.46:0,34,207
chr10	22136053	.	GTTTAT	G	696.93	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.462;DP=542;FS=3.893;HRun=0;HaplotypeScore=98.8638;InbreedingCoeff=0.9660;MQ=71.13;MQ0=0;MQRankSum=-0.951;QD=33.19;ReadPosRankSum=-0.086;VQSLOD=3.4895;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:45.14:0,45,1279	0/0:6,0:6:15.05:0,15,455	0/0:10,0:8:23.95:0,24,532	0/0:17,0:16:27.05:0,27,684	0/0:27,0:27:75.24:0,75,2179	0/0:27,0:27:69.24:0,69,2069	0/0:18,0:18:51.16:0,51,1473	0/0:30,0:30:81.27:0,81,2377	0/0:20,0:20:54.17:0,54,1499	0/0:23,0:23:69.23:0,69,1983	0/0:24,0:24:66.22:0,66,1898	0/0:16,0:16:45.14:0,45,1299	0/0:15,0:15:39.12:0,39,1057	0/0:20,0:20:51.16:0,51,1480	1/1:6,15:21:39.13:792,39,0	0/0:19,0:19:57.15:0,57,1616	0/0:30,0:30:84.25:0,84,2329	0/0:11,0:11:33.10:0,33,889	0/0:15,0:15:36.11:0,36,1025	0/0:29,0:29:81.26:0,81,2369	0/0:17,0:17:45.15:0,45,1321	0/0:17,0:17:42.13:0,42,1207	0/0:25,0:25:63.20:0,63,1839	0/0:5,0:5:15.05:0,15,434	0/0:24,0:24:63.22:0,63,1910	0/0:24,0:23:63.22:0,63,1911	0/0:19,0:19:57.18:0,57,1661	0/0:17,0:17:45.15:0,45,1364
chr10	22136142	.	A	AC	1554.20	PASS	AB=0.665;AC=31;AF=0.574;AN=54;BaseQRankSum=3.750;DP=476;FS=5.843;HRun=8;HaplotypeScore=66.5079;InbreedingCoeff=0.6743;MQ=84.31;MQ0=0;MQRankSum=-4.241;QD=6.53;ReadPosRankSum=-0.047;VQSLOD=0.4589;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:7,16:23:3.79:462,0,4	0/0:9,0:9:27.01:0,27,247	0/0:24,1:19:38.99:0,39,354	0/0:25,0:25:35.68:0,36,311	./.	1/1:11,0:11:4.87:28,5,0	1/1:5,0:15:17.04:86,17,0	0/0:33,0:33:72:0,72,659	0/0:20,0:20:48.01:0,48,439	1/1:9,0:9:5.75:30,6,0	1/1:3,0:4:2.84:14,3,0	1/1:12,0:13:8.65:49,9,0	1/1:6,0:18:14.20:72,14,0	1/1:11,0:19:2.83:14,3,0	1/1:12,13:25:26.69:561,27,0	0/1:3,0:10:18.78:20,0,19	0/0:29,0:29:81.03:0,81,741	0/0:16,0:16:45.02:0,45,412	0/0:16,0:16:36.02:0,36,329	0/0:30,0:30:81.03:0,81,736	0/0:20,0:20:60.01:0,60,543	1/1:11,1:16:5.47:38,5,0	1/1:10,0:10:4.61:18,5,0	1/1:4,2:15:5.68:29,6,0	0/1:7,0:9:0.01:0,0,0	1/1:5,2:13:14.37:92,14,0	1/1:5,0:22:34.22:213,34,0	1/1:2,0:6:2.97:20,3,0
chr10	22138059	.	TC	T	801.20	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.178;DP=701;FS=0.000;HRun=2;HaplotypeScore=65.2802;InbreedingCoeff=0.9994;MQ=81.01;MQ0=1;MQRankSum=-1.751;QD=30.82;ReadPosRankSum=2.870;VQSLOD=3.2525;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,120,1776	0/0:15,0:15:45.15:0,45,674	0/0:19,0:19:54.12:0,54,745	0/0:17,0:17:45.15:0,45,653	0/0:31,0:31:90.30:0,90,1347	0/0:24,0:24:66.21:0,66,968	0/0:33,0:33:93.31:0,93,1390	0/0:35,0:35:87.28:0,87,1268	0/0:19,0:19:57.19:0,57,851	0/0:24,0:24:63.21:0,63,927	0/0:18,0:18:54.18:0,54,809	0/0:27,0:27:81.25:0,81,1175	0/0:34,0:34:99:0,102,1506	0/0:25,0:25:75.24:0,75,1095	1/1:0,26:26:69.22:896,69,0	0/0:23,0:23:63.21:0,63,944	0/0:35,0:35:99:0,102,1528	0/0:13,0:13:39.11:0,39,563	0/0:23,0:23:69.22:0,69,1013	0/0:25,0:25:75.25:0,75,1124	0/0:27,0:26:78.26:0,78,1168	0/0:29,0:29:87.28:0,87,1284	0/0:23,0:23:69.23:0,69,1031	0/0:31,0:31:93.31:0,93,1391	0/0:18,0:18:54.18:0,54,808	0/0:31,0:31:93.30:0,93,1357	0/0:23,0:22:69.23:0,69,1034	0/0:11,0:11:30.10:0,30,450
chr10	22139266	.	C	CA	984.21	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.609;DP=617;FS=0.772;HRun=1;HaplotypeScore=65.0581;InbreedingCoeff=0.9653;MQ=82.24;MQ0=0;MQRankSum=-2.851;QD=36.45;ReadPosRankSum=1.316;VQSLOD=3.9705;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,138,1712	0/0:8,0:8:24.06:0,24,297	0/0:11,0:11:23.97:0,24,288	0/0:23,0:23:59.80:0,60,685	1/1:1,26:27:72.24:1079,72,0	0/0:17,0:17:51.12:0,51,630	0/0:25,0:25:72.23:0,72,935	0/0:41,0:41:99:0,123,1574	0/0:9,0:9:27.09:0,27,349	0/0:21,0:21:63.20:0,63,818	0/0:22,0:22:66.20:0,66,843	0/0:21,0:21:60.18:0,60,766	0/0:28,0:28:84.27:0,84,1090	0/0:22,0:22:63.20:0,63,816	0/0:19,0:19:54.18:0,54,701	0/0:24,0:24:72.22:0,72,921	0/0:29,0:29:87.26:0,87,1111	0/0:13,0:13:33.11:0,33,427	0/0:16,0:16:48.15:0,48,610	0/0:17,0:17:51.15:0,51,648	0/0:37,0:37:99:0,108,1388	0/0:19,0:19:57.19:0,57,740	0/0:20,0:20:51.17:0,51,662	0/0:26,0:26:75.20:0,75,942	0/0:20,0:20:60.20:0,60,779	0/0:26,0:26:75.24:0,75,961	0/0:26,0:26:78.25:0,78,1013	0/0:4,0:4:12.04:0,12,156
chr10	22139709	.	A	AC	74.76	PASS	AB=0.847;AC=2;AF=0.036;AN=56;BaseQRankSum=4.745;DP=320;FS=1.396;HRun=0;HaplotypeScore=35.8835;InbreedingCoeff=-0.0529;MQ=82.70;MQ0=1;MQRankSum=4.675;QD=2.88;ReadPosRankSum=-2.530;VQSLOD=2.0724;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:39.13:0,39,545	0/0:8,0:8:24.08:0,24,335	0/1:6,3:8:25.97:122,0,26	0/1:16,1:11:41.57:42,0,120	0/0:16,0:16:48.16:0,48,669	0/0:25,0:25:75.24:0,75,1029	0/0:2,0:2:3.01:0,3,42	0/0:40,0:40:99:0,114,1527	0/0:4,0:4:12.01:0,12,148	0/0:11,0:11:33.11:0,33,461	0/0:16,0:16:48.13:0,48,635	0/0:4,0:4:12.04:0,12,168	0/0:8,0:8:24.08:0,24,335	0/0:9,0:9:27.07:0,27,345	0/0:10,0:10:27.09:0,27,377	0/0:10,0:10:27.09:0,27,377	0/0:18,0:18:51.13:0,51,689	0/0:8,0:8:24.08:0,24,334	0/0:13,0:13:36.11:0,36,488	0/0:7,0:7:21.06:0,21,278	0/0:6,0:6:18.06:0,18,251	0/0:1,0:1:3.01:0,3,42	0/0:8,0:8:24.08:0,24,335	0/0:4,0:4:12:0,12,146	0/0:15,0:15:45.14:0,45,614	0/0:16,0:16:48.15:0,48,655	0/0:15,0:15:42.13:0,42,569	0/0:6,0:6:18.06:0,18,251
chr10	22140618	.	TTA	T	1435.55	PASS	AB=1.000;AC=19;AF=0.380;AN=50;BaseQRankSum=4.627;DP=192;FS=3.375;HRun=0;HaplotypeScore=31.3652;InbreedingCoeff=0.6484;MQ=83.81;MQ0=1;MQRankSum=0.805;QD=18.17;ReadPosRankSum=1.839;VQSLOD=3.0589;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:0,0:5:15.01:0,15,134	0/0:1,0:1:3.01:0,3,51	0/0:5,0:3:2.94:0,3,43	0/1:24,0:14:12.01:12,0,71	0/0:3,0:3:3.01:0,3,51	1/1:0,9:9:21.07:273,21,0	1/1:0,2:2:6.02:78,6,0	0/0:33,0:33:81.28:0,81,1342	0/0:1,0:1:3.01:0,3,51	1/1:1,3:4:9.03:117,9,0	1/1:0,4:4:12.04:156,12,0	1/1:3,7:10:21.07:273,21,0	1/1:0,3:3:9.03:117,9,0	./.	0/0:5,0:5:15.04:0,15,229	1/1:2,3:5:3.01:39,3,0	0/0:20,0:20:57.19:0,57,952	0/0:8,0:8:21.07:0,21,357	0/0:3,0:3:3.01:0,3,51	0/0:4,0:4:9.03:0,9,153	0/0:4,0:4:12.04:0,12,204	./.	1/1:0,3:2:6.02:78,6,0	./.	1/1:0,15:15:36.12:468,36,0	0/0:1,0:1:3.01:0,3,51	0/0:9,0:9:18.06:0,18,306	0/0:11,0:11:27.09:0,27,459
chr10	22140642	.	T	TTA	672.81	PASS	AC=6;AF=0.115;AN=52;BaseQRankSum=-4.382;DP=219;FS=5.471;HRun=0;HaplotypeScore=35.7878;InbreedingCoeff=0.6554;MQ=83.61;MQ0=0;MQRankSum=0.794;QD=26.91;ReadPosRankSum=0.166;VQSLOD=3.9081;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:8:24.06:0,24,295	./.	0/0:5,0:3:3.01:0,3,39	0/0:20,0:15:9.55:0,10,75	0/0:4,0:4:12.04:0,12,156	0/0:7,0:7:15.05:0,15,195	0/0:2,0:2:6.02:0,6,78	0/0:37,0:37:84.26:0,84,1066	0/0:1,0:1:3.01:0,3,39	0/0:8,0:8:24.07:0,24,298	0/0:4,0:4:12.04:0,12,155	0/0:10,0:10:27.09:0,27,349	0/0:4,0:4:9.03:0,9,117	0/0:3,0:3:9.03:0,9,116	0/0:6,0:6:12.04:0,12,156	0/0:5,0:5:9.03:0,9,116	0/0:27,0:27:66.20:0,66,843	0/0:8,0:8:24.08:0,24,312	0/0:4,0:4:12.04:0,12,156	0/0:6,0:6:15.05:0,15,195	0/0:2,0:2:6.02:0,6,78	0/0:1,0:1:3:0,3,25	0/0:5,0:5:12.04:0,12,156	./.	0/0:15,0:15:39.13:0,39,506	1/1:0,3:3:9.03:140,9,0	1/1:2,12:14:24.08:408,24,0	1/1:3,5:8:15.05:255,15,0
chr10	22141065	.	TGG	T	4699.34	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-0.200;DP=415;FS=1.351;HRun=9;HaplotypeScore=74.1570;InbreedingCoeff=0.9759;MQ=79.39;MQ0=0;MQRankSum=-1.225;QD=31.33;ReadPosRankSum=3.771;VQSLOD=5.2243;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:36.12:0,36,587	0/0:9,0:9:27.09:0,27,439	0/0:32,0:30:50.25:0,50,595	0/0:11,0:7:11.87:0,12,129	0/0:1,0:20:48.30:0,48,168	1/1:0,8:8:24.07:280,24,0	1/1:1,12:13:36.10:420,36,0	0/0:25,0:25:60.20:0,60,969	0/0:17,0:17:51.17:0,51,814	1/1:2,12:14:33.04:385,33,0	1/1:0,18:18:54.16:629,54,0	1/1:1,4:5:12.04:140,12,0	1/1:0,13:13:39.12:454,39,0	1/1:6,11:17:36.10:416,36,0	0/0:4,0:17:34.81:0,35,122	1/1:3,10:13:39.08:440,39,0	0/0:15,0:15:39.13:0,39,640	0/0:20,0:20:57.19:0,57,934	0/0:12,0:12:33.11:0,33,541	0/0:18,0:18:16.62:0,17,753	0/0:5,0:5:12.04:0,12,197	1/1:0,12:12:36.11:418,36,0	1/1:2,16:18:51.15:594,51,0	1/1:1,4:5:9.03:105,9,0	1/1:2,12:14:36.10:420,36,0	0/0:12,0:17:27.03:0,27,276	0/0:5,0:14:33.05:0,33,316	0/0:2,0:15:21.03:0,21,203
chr10	22141232	.	TC	T	1148.76	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=6.371;DP=509;FS=10.048;HRun=4;HaplotypeScore=52.6876;InbreedingCoeff=0.9805;MQ=58.03;MQ0=2;MQRankSum=0.436;QD=28.72;ReadPosRankSum=1.351;VQSLOD=2.6555;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:69.17:0,69,925	0/0:4,0:4:12.04:0,12,168	0/0:12,0:7:21.06:0,21,277	0/0:22,0:17:39.12:0,39,522	0/0:22,0:22:63.21:0,63,880	0/0:13,0:13:36.12:0,36,494	0/0:24,0:24:72.21:0,72,983	0/0:32,0:32:87.27:0,87,1173	0/0:16,0:16:48.13:0,48,636	0/0:11,0:11:33.11:0,33,461	0/0:13,0:13:39.11:0,39,527	0/0:16,0:16:45.15:0,45,626	0/0:15,0:15:45.14:0,45,612	0/0:26,0:26:75.25:0,75,1048	0/0:18,0:18:54.12:0,54,715	0/0:19,0:19:57.18:0,57,782	0/0:33,0:33:96.28:0,96,1320	0/0:17,0:17:48.16:0,48,654	0/0:13,0:12:30.10:0,30,420	0/0:17,0:17:42.11:0,42,552	0/0:35,0:35:99:0,99,1342	0/0:13,0:13:39.13:0,39,546	0/0:10,0:10:27.09:0,27,378	0/0:23,0:23:63.21:0,63,882	0/0:20,0:20:60.20:0,60,840	1/1:1,19:20:15.16:606,15,0	1/1:0,11:11:33.10:395,33,0	1/1:1,8:9:24.07:288,24,0
chr10	22141382	.	GGGAGGATCT	G	1747.41	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.469;DP=668;FS=1.774;HRun=0;HaplotypeScore=175.7441;InbreedingCoeff=0.9664;MQ=58.87;MQ0=0;MQRankSum=-6.858;QD=69.90;ReadPosRankSum=0.930;VQSLOD=3.3342;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,144,6820	0/0:7,0:7:21.07:0,21,994	0/0:21,0:18:49.25:0,49,2070	0/0:33,0:28:72.25:0,72,3103	0/0:14,0:14:39.13:0,39,1730	0/0:18,0:18:51.18:0,51,2250	0/0:29,0:29:87.30:0,87,3956	0/0:34,0:34:99:0,102,4503	0/0:18,0:18:51.18:0,51,2326	0/0:20,0:20:57.20:0,57,2670	0/0:15,0:15:45.15:0,45,2121	0/0:19,0:19:54.19:0,54,2429	0/0:31,0:31:87.30:0,87,4044	0/0:32,0:32:90.31:0,90,4140	1/1:0,25:24:60.21:1842,60,0	0/0:32,0:32:96.33:0,96,4511	0/0:42,0:42:99:0,120,5488	0/0:28,0:28:81.28:0,81,3776	0/0:22,0:19:54.18:0,54,2217	0/0:21,0:21:60.21:0,60,2762	0/0:44,0:44:99:0,129,5897	0/0:22,0:22:63.22:0,63,3019	0/0:19,0:19:54.19:0,54,2592	0/0:19,0:19:57.15:0,57,2122	0/0:16,0:16:48.16:0,48,2100	0/0:14,0:14:42.14:0,42,1987	0/0:20,0:20:54.19:0,54,2560	0/0:4,0:4:12.04:0,12,387
chr10	22142470	.	G	GTGTGTG	3505.56	PASS	AB=1.000;AC=45;AF=0.900;AN=50;BaseQRankSum=-2.610;DP=702;FS=3.382;HRun=0;HaplotypeScore=144.5277;InbreedingCoeff=0.3858;MQ=51.27;MQ0=24;MQRankSum=-0.318;QD=6.11;ReadPosRankSum=-0.773;VQSLOD=2.5961;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:9.03:0,9,126	1/1:13,0:13:3.01:78,3,0	./.	./.	0/0:22,0:22:14.96:0,15,232	1/1:21,0:21:3.48:97,3,0	1/1:26,0:26:8.82:153,9,0	1/1:29,0:25:6.11:18,6,0	1/1:24,0:24:5.85:174,6,0	1/1:21,0:21:15.05:249,15,0	1/1:13,0:13:6.02:134,6,0	1/1:31,0:30:5.69:50,6,0	1/1:31,0:30:3.01:38,3,0	1/1:30,0:28:9.50:224,10,0	1/1:30,0:29:6.01:156,6,0	1/1:27,0:27:6.49:136,6,0	1/1:34,0:34:9.03:199,9,0	1/1:17,0:17:9.02:179,9,0	1/1:23,5:25:20.56:412,21,0	1/1:21,0:21:15.05:373,15,0	1/1:39,0:37:14.91:335,15,0	1/1:26,0:26:2.27:95,2,0	1/1:16,0:16:6.02:135,6,0	1/1:28,0:28:2.61:96,3,0	1/1:20,0:20:3.01:39,3,0	1/1:26,0:26:13.22:137,13,0	0/1:22,0:21:0:0,0,0	./.
chr10	22143568	.	G	GA	1001.92	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=0.361;DP=657;FS=2.362;HRun=6;HaplotypeScore=89.5467;InbreedingCoeff=0.9829;MQ=75.42;MQ0=0;MQRankSum=0.514;QD=29.47;ReadPosRankSum=-0.451;VQSLOD=3.7839;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:66.12:0,66,665	0/0:6,0:6:18.04:0,18,184	0/0:16,0:15:20.64:0,21,312	0/0:13,0:12:20.67:0,21,207	1/1:4,30:34:90.24:1097,90,0	0/0:33,0:33:90.20:0,90,918	0/0:20,0:20:51.08:0,51,512	0/0:31,0:31:75.15:0,75,755	0/0:24,0:24:60.13:0,60,612	0/0:25,0:25:75.16:0,75,757	0/0:21,0:21:54.12:0,54,551	0/0:35,0:35:99:0,99,1003	0/0:30,0:30:90.19:0,90,912	0/0:29,0:29:87.20:0,87,887	0/0:29,0:29:75.15:0,75,758	0/0:25,0:25:69.14:0,69,697	0/0:11,0:11:30.07:0,30,306	0/0:19,0:19:48.10:0,48,490	0/0:24,0:24:72.16:0,72,734	0/0:20,0:20:60.14:0,60,612	0/0:21,0:21:63.12:0,63,635	0/0:19,0:19:51.11:0,51,520	0/0:23,0:23:66.15:0,66,673	0/0:18,0:18:42.08:0,42,421	0/0:20,0:20:57.12:0,57,575	0/0:30,0:30:81.18:0,81,826	0/0:35,0:35:96.22:0,96,979	0/0:23,0:23:66.15:0,66,673
chr10	22144083	.	ATG	A	256.69	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.927;DP=550;FS=20.767;HRun=0;HaplotypeScore=103.8337;InbreedingCoeff=0.9886;MQ=78.10;MQ0=0;MQRankSum=-5.871;QD=15.10;ReadPosRankSum=1.958;VQSLOD=2.1681;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,120,2321	0/0:9,0:9:27.09:0,27,549	0/0:8,0:8:24.08:0,24,466	0/0:18,0:18:47.99:0,48,771	1/1:0,17:17:36.03:351,36,0	0/0:20,0:20:57.20:0,57,1157	0/0:16,0:16:48.16:0,48,975	0/0:30,0:30:90.31:0,90,1814	0/0:12,0:12:36.11:0,36,694	0/0:23,0:23:69.24:0,69,1401	0/0:14,0:14:42.14:0,42,853	0/0:31,0:31:93.32:0,93,1889	0/0:26,0:26:78.25:0,78,1547	0/0:17,0:17:51.16:0,51,988	0/0:31,0:31:93.31:0,93,1853	0/0:22,0:22:66.20:0,66,1269	0/0:30,0:30:90.29:0,90,1733	0/0:6,0:6:18.06:0,18,365	0/0:19,0:19:57.19:0,57,1112	0/0:19,0:19:57.18:0,57,1087	0/0:23,0:23:69.24:0,69,1402	0/0:12,0:12:36.11:0,36,695	0/0:16,0:16:48.16:0,48,975	0/0:20,0:20:60.21:0,60,1188	0/0:18,0:18:54.19:0,54,1097	0/0:18,0:18:54.19:0,54,1075	0/0:20,0:20:60.20:0,60,1166	0/0:14,0:14:42.14:0,42,852
chr10	22144086	.	CTTGGATTT	C	725.27	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.906;DP=549;FS=18.220;HRun=0;HaplotypeScore=171.0118;InbreedingCoeff=0.9885;MQ=76.70;MQ0=0;MQRankSum=-5.846;QD=42.66;ReadPosRankSum=1.694;VQSLOD=2.3607;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,126,5519	0/0:9,0:9:27.09:0,27,1213	0/0:8,0:8:24.08:0,24,952	0/0:16,0:16:45.10:0,45,1612	1/1:0,17:17:36.12:820,36,0	0/0:22,0:22:66.23:0,66,2867	0/0:17,0:17:51.16:0,51,2032	0/0:31,0:31:90.30:0,90,3805	0/0:11,0:11:33.11:0,33,1496	0/0:23,0:23:69.24:0,69,3128	0/0:14,0:14:42.14:0,42,1869	0/0:31,0:31:93.32:0,93,4211	0/0:25,0:25:75.26:0,75,3332	0/0:16,0:16:48.16:0,48,2140	0/0:32,0:32:96.33:0,96,4282	0/0:22,0:22:66.21:0,66,2870	0/0:29,0:29:87.30:0,87,3820	0/0:6,0:6:18.06:0,18,815	0/0:18,0:18:54.19:0,54,2310	0/0:20,0:20:60.20:0,60,2593	0/0:23,0:23:69.21:0,69,2907	0/0:12,0:12:36.12:0,36,1623	0/0:16,0:16:48.16:0,48,2175	0/0:18,0:18:54.19:0,54,2407	0/0:19,0:19:54.19:0,54,2308	0/0:18,0:18:54.19:0,54,2390	0/0:19,0:19:57.18:0,57,2456	0/0:15,0:15:42.14:0,42,1841
chr10	22144247	.	G	GT	992.47	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-7.176;DP=601;FS=3.271;HRun=7;HaplotypeScore=55.5937;InbreedingCoeff=0.9841;MQ=85.01;MQ0=0;MQRankSum=-0.360;QD=28.36;ReadPosRankSum=1.840;VQSLOD=4.4743;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:42.06:0,42,406	0/0:9,0:9:24.03:0,24,232	0/0:20,0:20:19.93:0,20,364	0/0:19,0:19:36.03:0,36,339	0/0:22,0:22:60.09:0,60,579	0/0:33,0:33:90.13:0,90,863	0/0:23,0:23:69.07:0,69,648	0/0:33,0:33:87.13:0,87,836	0/0:21,0:21:51.06:0,51,487	0/0:20,0:20:57.09:0,57,550	0/0:26,0:26:72.11:0,72,695	0/0:37,0:37:99:0,111,1071	0/0:28,0:28:81.13:0,81,782	0/0:19,0:19:54.07:0,54,516	1/1:2,33:35:90.28:1087,90,0	0/0:23,0:23:57.04:0,57,538	0/0:20,0:20:57.07:0,57,543	0/0:7,0:7:18.03:0,18,174	0/0:23,0:23:57.06:0,57,539	0/0:22,0:22:63.10:0,63,608	0/0:13,0:13:39.06:0,39,376	0/0:18,0:18:48.07:0,48,464	0/0:18,0:18:48.07:0,48,464	0/0:15,0:15:42.01:0,42,396	0/0:17,0:17:51.08:0,51,492	0/0:30,0:30:87.14:0,87,840	0/0:25,0:24:69.08:0,69,659	0/0:10,0:10:30.05:0,30,290
chr10	22145017	.	C	CTT	1051.81	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-0.736;DP=619;FS=0.000;HRun=9;HaplotypeScore=73.0183;InbreedingCoeff=0.9822;MQ=73.95;MQ0=0;MQRankSum=-1.089;QD=31.87;ReadPosRankSum=-0.798;VQSLOD=3.5966;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:25:50.94:0,51,639	0/0:18,0:18:38.71:0,39,470	0/0:15,0:15:40.27:0,40,397	0/0:11,0:12:15.47:0,15,147	1/1:2,27:33:91.54:1147,92,0	0/0:24,0:25:57.06:0,57,646	0/0:12,0:12:30.04:0,30,312	0/0:46,0:46:90.12:0,90,952	0/0:20,0:20:51.08:0,51,527	0/0:28,0:30:68.85:0,69,770	0/0:16,0:17:33:0,33,407	0/0:15,0:15:45.11:0,45,479	0/0:19,0:19:51.11:0,51,543	0/0:13,0:13:27.02:0,27,272	0/0:22,0:23:56.85:0,57,579	0/0:26,0:26:78.20:0,78,830	0/0:10,0:9:30.08:0,30,319	0/0:16,0:15:32.98:0,33,327	0/0:20,0:21:47.99:0,48,535	0/0:33,0:33:93.18:0,93,973	0/0:17,0:17:51.13:0,51,543	0/0:23,0:23:60.04:0,60,623	0/0:25,0:25:75.10:0,75,768	0/0:17,0:17:41.92:0,42,438	0/0:32,0:32:90.22:0,90,958	0/0:26,0:26:78.19:0,78,823	0/0:37,0:36:93.15:0,93,972	0/0:12,0:12:27.12:0,27,315
chr10	22145750	.	AC	A	10963.64	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=3.619;DP=715;FS=4.143;HRun=4;HaplotypeScore=82.2968;InbreedingCoeff=0.9994;MQ=86.96;MQ0=0;MQRankSum=-2.932;QD=31.78;ReadPosRankSum=4.429;VQSLOD=5.3890;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,108,1441	0/0:10,0:10:30.10:0,30,414	0/0:27,0:27:72.22:0,72,970	0/0:20,0:20:60.16:0,60,801	0/0:14,0:14:36.12:0,36,490	1/1:1,18:19:48.15:576,48,0	1/1:4,27:31:75.23:900,75,0	0/0:42,0:42:99:0,117,1614	0/0:34,0:34:96.32:0,96,1334	1/1:1,15:16:45.14:540,45,0	1/1:0,9:9:27.08:324,27,0	1/1:0,35:35:96.14:1151,96,0	1/1:1,43:44:99:1474,123,0	1/1:1,32:33:93.29:1115,93,0	1/1:0,39:39:99:1296,108,0	1/1:0,37:37:99:1187,99,0	0/0:30,0:30:84.28:0,84,1171	0/0:17,0:17:51.17:0,51,710	0/0:26,0:26:63.19:0,63,863	0/0:20,0:20:57.16:0,57,763	0/0:30,0:30:87.28:0,87,1202	1/1:1,14:15:36.11:432,36,0	1/1:2,12:14:30.09:357,30,0	1/1:2,33:35:87.27:1044,87,0	1/1:1,17:18:48.14:567,48,0	0/0:21,1:22:24.17:0,24,730	0/0:25,0:25:75.25:0,75,1050	0/0:15,0:15:45.15:0,45,626
chr10	22145910	.	T	TA	28404.87	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-2.921;DP=812;FS=0.614;HRun=3;HaplotypeScore=111.2866;InbreedingCoeff=0.9485;MQ=82.08;MQ0=0;MQRankSum=-10.390;QD=36.94;ReadPosRankSum=5.427;VQSLOD=4.0922;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,27:28:78.26:1085,78,0	1/1:0,14:14:42.14:588,42,0	0/0:24,0:24:57.17:0,57,684	0/0:19,0:19:57.15:0,57,657	1/1:40,0:40:98.85:853,99,0	1/1:1,27:28:75.25:1050,75,0	1/1:1,30:31:84.28:1176,84,0	1/1:1,37:38:99:1520,111,0	1/1:0,24:24:69.23:966,69,0	1/1:1,35:36:99:1435,105,0	1/1:2,31:33:90.26:1235,90,0	1/1:1,25:26:69.23:966,69,0	1/1:2,37:39:99:1470,105,0	1/1:2,24:26:63.21:882,63,0	1/1:1,40:41:99:1554,111,0	1/1:4,43:47:99:1681,120,0	1/1:2,19:21:51.17:714,51,0	1/1:0,20:20:51.17:714,51,0	1/1:2,20:22:60.17:805,60,0	1/1:2,37:39:99:1511,111,0	1/1:2,41:43:99:1638,117,0	1/1:0,28:28:72.24:1008,72,0	1/1:1,27:28:75.25:1050,75,0	1/1:1,34:35:90.30:1260,90,0	1/1:0,25:25:72.24:1008,72,0	1/1:1,34:35:99:1351,99,0	1/1:1,19:20:57.19:798,57,0	1/1:2,0:2:6.02:84,6,0
chr10	22145911	.	A	AC	10770.25	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=5.655;DP=806;FS=0.483;HRun=0;HaplotypeScore=172.4281;InbreedingCoeff=0.8879;MQ=81.26;MQ0=0;MQRankSum=-9.616;QD=14.08;ReadPosRankSum=10.075;VQSLOD=5.1111;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:29:75.14:411,75,0	1/1:14,0:14:40.20:211,40,0	0/0:22,0:22:59.98:0,60,777	0/0:19,0:19:57.16:0,57,757	1/1:1,40:41:99:1578,99,0	1/1:27,0:27:71.94:379,72,0	1/1:30,0:30:80.03:408,80,0	1/1:38,0:38:71.81:438,72,0	1/1:24,0:24:66.30:355,66,0	1/1:36,0:36:67.27:426,67,0	1/1:32,0:32:66.62:414,67,0	1/1:25,0:25:66.06:354,66,0	1/1:40,0:40:59.88:495,60,0	1/1:26,0:26:12.69:269,13,0	1/1:41,0:41:83.62:506,84,0	1/1:47,0:47:19.91:473,20,0	1/1:20,0:20:27.18:237,27,0	1/1:21,0:21:51.90:279,52,0	1/1:22,0:22:6.79:222,7,0	1/1:38,0:38:99:532,101,0	1/1:41,0:41:99:596,112,0	1/1:28,0:28:18.16:306,18,0	1/1:27,0:27:72.21:397,72,0	1/1:35,0:35:68.73:452,69,0	1/1:25,0:25:68.28:339,68,0	1/1:36,0:36:42.20:391,42,0	1/1:20,0:20:31.04:271,31,0	1/1:2,0:2:5.81:32,6,0
chr10	22146206	.	TCATGTGAGTC	T	1100.39	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.706;DP=758;FS=6.608;HRun=0;HaplotypeScore=246.5495;InbreedingCoeff=0.9452;MQ=77.20;MQ0=0;MQRankSum=-4.627;QD=42.32;ReadPosRankSum=-2.438;VQSLOD=2.3024;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,135,6733	0/0:17,0:17:48.16:0,48,2315	0/0:15,0:15:42.11:0,42,1612	0/0:19,0:19:44.93:0,45,1633	1/1:4,22:26:50.91:1195,51,0	0/0:33,0:33:87.30:0,87,4279	0/0:33,0:33:87.28:0,87,4096	0/0:25,0:25:69.22:0,69,3049	0/0:21,0:21:60.21:0,60,3035	0/0:24,0:24:72.25:0,72,3586	0/0:24,0:24:60.21:0,60,2968	0/0:35,0:35:99:0,102,5119	0/0:32,0:32:96.33:0,96,4868	0/0:38,0:38:99:0,112,5210	0/0:52,0:52:99:0,151,7606	0/0:30,0:30:87.29:0,87,4105	0/0:19,0:19:54.13:0,54,2419	0/0:19,0:19:57.20:0,57,2910	0/0:25,0:25:66.22:0,66,2984	0/0:28,0:28:81.28:0,81,4058	0/0:33,0:33:96.24:0,96,4557	0/0:25,0:25:75.23:0,75,3509	0/0:22,0:22:63.22:0,63,3048	0/0:24,0:24:69.24:0,69,3497	0/0:25,0:25:63.20:0,63,3000	0/0:34,0:34:93.30:0,93,4358	0/0:30,0:30:81.28:0,81,4083	0/0:3,0:3:9.03:0,9,471
chr10	22146333	.	CA	C	7282.17	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=14.744;DP=854;FS=2.421;HRun=4;HaplotypeScore=84.6465;InbreedingCoeff=0.9930;MQ=85.46;MQ0=0;MQRankSum=-6.577;QD=32.37;ReadPosRankSum=-0.256;VQSLOD=5.0744;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:93.23:0,93,1244	1/1:0,11:11:21.06:252,21,0	0/0:30,0:30:87.26:0,87,1155	0/0:24,0:24:18.77:0,19,725	0/0:33,0:33:90.30:0,90,1259	0/0:33,0:33:96.31:0,96,1329	0/0:26,0:26:78.25:0,78,1077	1/1:2,38:40:99:1319,114,0	1/1:2,22:24:63.19:756,63,0	0/0:42,0:42:99:0,111,1510	0/0:33,0:33:99:0,99,1353	0/0:36,0:36:99:0,105,1469	0/0:42,0:42:99:0,117,1586	0/0:36,0:36:99:0,102,1375	0/0:44,0:44:99:0,132,1832	0/0:30,0:30:87.28:0,87,1200	1/1:0,37:37:99:1296,108,0	1/1:3,21:24:63.19:756,63,0	1/1:1,20:21:60.17:708,60,0	1/1:1,35:36:99:1188,99,0	1/1:1,31:32:84.26:1008,84,0	0/0:33,0:33:96.31:0,96,1326	0/0:42,0:42:99:0,123,1703	0/0:22,0:22:63.21:0,63,882	0/0:18,0:18:51.17:0,51,714	0/0:28,0:28:78.23:0,78,1041	0/0:40,0:40:99:0,117,1568	0/0:4,0:4:12.04:0,12,168
chr10	22146922	.	ACC	A	5280.31	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=10.729;DP=571;FS=2.619;HRun=2;HaplotypeScore=136.6485;InbreedingCoeff=0.9734;MQ=63.14;MQ0=11;MQRankSum=-2.260;QD=21.82;ReadPosRankSum=0.075;VQSLOD=3.0772;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:38:88.44:0,88,801	0/0:10,0:10:26.89:0,27,231	0/0:28,0:18:15.14:0,15,332	0/0:28,0:25:57.46:0,57,529	0/0:19,0:18:46.74:0,47,433	1/1:7,2:9:25.24:214,25,0	1/1:26,2:28:61.26:555,61,0	0/0:16,0:16:44.95:0,45,419	0/0:20,0:20:38.71:0,39,360	1/1:17,1:18:49.10:424,49,0	1/1:10,0:10:21.41:176,21,0	1/1:16,5:21:56.82:492,57,0	1/1:16,3:19:50.49:430,50,0	1/1:11,5:16:44.99:412,45,0	1/1:14,7:21:62.19:543,62,0	1/1:15,7:23:62.99:572,63,0	0/0:28,0:29:71.52:0,72,845	0/0:20,0:20:44.30:0,44,473	0/0:18,0:18:53.97:0,54,586	0/0:16,0:15:29.92:0,30,300	0/0:38,0:38:65.79:0,66,587	1/1:13,1:13:24.01:218,24,0	1/1:14,4:18:42:375,42,0	1/1:28,2:30:65.62:508,66,0	1/1:8,7:15:41.66:361,42,0	0/0:23,0:23:66.82:0,67,610	0/0:17,0:16:28.58:0,29,255	0/0:4,0:4:3.20:0,3,24
chr10	22146923	.	C	CCA	1189.47	PASS	AB=0.970;AC=22;AF=0.423;AN=52;BaseQRankSum=-7.202;DP=600;FS=5.763;HRun=0;HaplotypeScore=164.1630;InbreedingCoeff=0.4843;MQ=60.42;MQ0=13;MQRankSum=4.835;QD=4.07;ReadPosRankSum=-0.039;VQSLOD=2.2250;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:39,3:43:17.52:229,18,0	1/1:10,2:12:3.01:44,3,0	./.	./.	1/1:16,7:23:11.56:176,12,0	0/0:10,0:10:0.15:0,0,9	0/0:28,0:28:2.84:0,3,14	1/1:19,0:19:2.19:5,2,0	1/1:15,1:26:17.78:159,18,0	0/0:18,0:18:2.63:0,3,13	1/1:10,0:10:1.55:5,2,0	0/0:22,0:22:11.25:0,11,63	0/0:20,0:19:8.52:0,9,42	0/0:17,0:16:14.04:0,14,67	0/0:21,0:21:15.22:0,15,81	0/0:22,0:22:17:0,17,83	0/1:29,1:31:39.19:310,0,39	1/1:19,2:20:14.92:164,15,0	0/1:19,0:19:10.97:80,0,11	1/1:15,2:16:6.02:89,6,0	1/1:31,10:42:6.02:89,6,0	0/0:14,0:13:2.78:0,3,14	0/0:18,0:18:8.48:0,8,41	0/0:28,0:29:2.05:0,2,13	0/0:13,0:13:11.89:0,12,51	1/1:24,0:24:0.94:3,1,0	0/0:18,0:17:8.15:0,8,41	0/0:4,0:4:2.84:0,3,14
chr10	22146958	.	CACACACACAT	C	8824.56	PASS	AB=1.000;AC=37;AF=0.661;AN=56;BaseQRankSum=0.294;DP=696;FS=19.087;HRun=0;HaplotypeScore=223.0519;InbreedingCoeff=0.1084;MQ=56.72;MQ0=17;MQRankSum=0.477;QD=14.93;ReadPosRankSum=-1.877;VQSLOD=2.3654;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:42,0:40:92.81:93,0,1360	0/1:11,0:11:39.92:40,0,236	0/0:29,0:13:32.11:0,32,369	0/0:37,0:20:46.41:0,46,603	0/1:28,0:28:99:111,0,696	1/1:15,0:15:21.74:327,22,0	1/1:21,0:21:45.84:520,46,0	0/1:21,0:20:99:215,0,413	0/1:36,0:35:99:156,0,511	1/1:16,0:16:33.78:332,34,0	1/1:19,0:19:28.18:268,28,0	1/1:26,0:26:63.99:924,64,0	1/1:24,0:23:56.31:690,56,0	1/1:28,0:27:58.84:835,59,0	1/1:23,1:24:58.01:1019,58,0	1/1:17,2:19:43.34:825,43,0	0/1:34,0:34:99:107,0,1884	0/1:21,0:18:53.13:53,0,763	0/1:27,0:25:99:118,0,1028	0/1:15,0:14:20.90:21,0,556	0/1:44,0:44:99:150,0,829	1/1:16,0:16:35.64:327,36,0	1/1:21,1:22:11.76:325,12,0	1/1:27,1:28:32.56:432,33,0	1/1:21,0:21:49.19:809,49,0	0/1:33,0:33:99:125,0,1301	0/0:31,0:29:22.37:0,22,446	0/0:8,0:8:8.99:0,9,193
chr10	22146960	.	CACACACAT	C	7920.35	PASS	AB=1.000;AC=37;AF=0.661;AN=56;BaseQRankSum=0.632;DP=678;FS=22.576;HRun=0;HaplotypeScore=200.4641;InbreedingCoeff=0.1070;MQ=57.04;MQ0=16;MQRankSum=-0.214;QD=13.77;ReadPosRankSum=0.807;VQSLOD=2.6213;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:42,0:40:99:134,0,950	0/1:11,0:11:51.89:52,0,153	0/0:28,0:13:32.11:0,32,369	0/0:37,0:20:46.34:0,46,602	0/1:28,0:28:99:132,0,486	1/1:11,2:13:26.37:266,26,0	1/1:16,2:18:44.55:399,45,0	0/1:20,0:19:99:218,0,271	0/1:34,0:34:99:180,0,342	1/1:15,1:16:47.25:360,47,0	1/1:16,0:16:38.42:294,38,0	1/1:19,5:24:68.65:780,69,0	1/1:19,3:21:53.30:531,53,0	1/1:25,5:29:74.13:758,74,0	1/1:19,6:25:65.63:821,66,0	1/1:13,5:18:47.37:680,47,0	0/1:35,0:35:99:147,0,1374	0/1:21,0:18:56.69:57,0,531	0/1:25,0:23:99:145,0,698	0/1:14,0:13:38.88:39,0,367	0/1:44,0:44:99:169,0,578	1/1:15,1:16:38.67:324,39,0	1/1:18,2:20:11.56:240,12,0	1/1:27,1:28:32.70:343,33,0	1/1:15,7:22:56.76:687,57,0	0/1:33,0:33:99:165,0,804	0/0:30,0:28:18.74:0,19,272	0/0:8,0:8:8.99:0,9,142
chr10	22146966	.	CAT	C	7570.13	PASS	AB=0.902;AC=47;AF=0.839;AN=56;BaseQRankSum=0.419;DP=683;FS=1.007;HRun=0;HaplotypeScore=149.5654;InbreedingCoeff=0.3126;MQ=67.08;MQ0=13;MQRankSum=-4.019;QD=12.49;ReadPosRankSum=4.329;VQSLOD=4.6039;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:40,0:39:39.44:293,0,39	1/1:10,0:10:10.49:86,10,0	0/0:34,0:19:47.59:0,48,511	0/0:43,0:26:61.30:0,61,714	1/1:29,0:29:34.21:274,34,0	1/1:15,0:15:26.34:197,26,0	1/1:20,0:20:53.05:379,53,0	1/1:23,0:22:19.91:354,20,0	1/1:31,0:31:10.05:213,10,0	1/1:1,17:18:50.17:336,50,0	1/1:18,0:18:43.36:296,43,0	1/1:26,0:26:77.30:579,77,0	1/1:24,0:23:59.73:420,60,0	1/1:31,0:30:77.02:550,77,0	1/1:26,0:26:64.34:487,64,0	1/1:19,0:19:50.51:408,51,0	0/1:32,1:33:77.27:245,0,77	0/1:21,0:18:30.92:97,0,31	1/1:25,0:24:1.81:287,2,0	0/1:13,0:12:12.53:85,0,13	1/1:39,0:39:50.66:354,51,0	1/1:17,0:17:41.63:302,42,0	1/1:4,18:22:11.36:98,11,0	1/1:28,0:28:29.81:223,30,0	1/1:23,0:23:59.58:460,60,0	1/1:22,0:22:58.88:382,59,0	1/1:2,24:25:8.49:121,8,0	0/1:1,6:7:2.42:43,0,2
chr10	22147862	.	C	CAAGCA	22567.27	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-14.688;DP=697;FS=7.794;HRun=0;HaplotypeScore=110.6123;InbreedingCoeff=0.9993;MQ=76.43;MQ0=0;MQRankSum=-8.191;QD=73.51;ReadPosRankSum=2.812;VQSLOD=6.7854;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:41:99:0,120,2411	0/0:10,0:10:30.09:0,30,584	0/0:17,0:17:39.13:0,39,780	0/0:17,0:16:39.09:0,39,691	0/0:26,0:26:75.26:0,75,1555	1/1:1,11:13:30.10:922,30,0	1/1:9,19:28:66.14:1787,66,0	0/0:27,0:27:75.24:0,75,1473	0/0:15,0:15:45.15:0,45,919	1/1:5,21:26:72.24:2138,72,0	1/1:3,22:26:69.19:2009,69,0	1/1:4,22:27:66.19:1957,66,0	1/1:5,22:27:72.20:2098,72,0	1/1:2,24:26:66.23:1988,66,0	0/0:32,0:32:90.31:0,90,1835	1/1:2,27:30:84.29:2580,84,0	0/0:36,0:36:99:0,102,2074	0/0:29,0:29:87.23:0,87,1666	0/0:24,0:24:60.18:0,60,1172	0/0:26,0:26:72.19:0,72,1353	0/0:23,0:23:54.19:0,54,1119	1/1:4,18:24:57.02:1461,57,0	1/1:4,24:28:75.17:2120,75,0	1/1:4,23:27:63.22:1934,63,0	1/1:5,19:25:60.08:1573,60,0	0/0:23,0:23:63.17:0,63,1252	0/0:36,0:36:99:0,105,2071	0/0:7,0:7:21.07:0,21,435
chr10	22148168	.	A	AT	21993.62	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=5.167;DP=671;FS=2.685;HRun=0;HaplotypeScore=111.8584;InbreedingCoeff=0.9998;MQ=78.81;MQ0=0;MQRankSum=-9.641;QD=36.96;ReadPosRankSum=7.316;VQSLOD=3.9016;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,30:31:72.24:978,72,0	1/1:0,12:12:36.12:495,36,0	0/0:23,0:23:69.17:0,69,906	0/0:31,0:31:87.01:0,87,1136	0/0:22,0:22:66.22:0,66,920	1/1:2,19:21:57.19:780,57,0	1/1:0,23:23:69.23:933,69,0	1/1:1,37:38:99:1485,110,0	1/1:0,18:19:54.18:745,54,0	1/1:1,18:19:46.83:730,47,0	1/1:2,21:23:54.07:737,54,0	1/1:1,25:26:66.15:889,66,0	1/1:0,13:14:33.10:428,33,0	1/1:0,18:19:48.16:650,48,0	1/1:0,34:34:99:1341,99,0	1/1:1,26:27:75.25:1008,75,0	1/1:1,26:27:75.24:1004,75,0	1/1:0,18:18:54.18:746,54,0	1/1:1,20:21:59.35:798,59,0	1/1:1,22:23:66.19:896,66,0	1/1:1,28:29:78.26:1065,78,0	1/1:0,26:26:74.13:1006,74,0	1/1:0,22:22:48.13:646,48,0	1/1:0,23:23:66.22:897,66,0	1/1:1,21:22:57.19:772,57,0	1/1:2,29:31:87.40:1208,87,0	1/1:1,28:29:78.25:1057,78,0	1/1:0,18:18:51.17:699,51,0
chr10	22148733	.	C	CGGAA	1502.30	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-4.785;DP=810;FS=0.838;HRun=0;HaplotypeScore=164.3970;InbreedingCoeff=0.9996;MQ=89.10;MQ0=0;MQRankSum=-2.528;QD=55.64;ReadPosRankSum=-0.120;VQSLOD=4.7591;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,148,3080	0/0:21,0:21:63.22:0,63,1277	0/0:33,0:33:93.28:0,93,1802	0/0:28,0:27:69.23:0,69,1374	1/1:3,22:27:60.16:1597,60,0	0/0:26,0:26:69.24:0,69,1448	0/0:26,0:26:72.25:0,72,1510	0/0:34,0:34:99:0,99,2002	0/0:33,0:33:99:0,99,2039	0/0:29,0:29:87.30:0,87,1824	0/0:27,0:27:78.27:0,78,1621	0/0:28,0:28:84.29:0,84,1762	0/0:36,0:36:99:0,108,2200	0/0:34,0:34:99:0,99,2060	0/0:41,0:41:99:0,123,2580	0/0:43,0:43:99:0,129,2693	0/0:29,0:29:84.26:0,84,1721	0/0:13,0:13:36.12:0,36,755	0/0:18,0:18:51.16:0,51,1033	0/0:31,0:31:93.32:0,93,1938	0/0:23,0:23:69.24:0,69,1433	0/0:31,0:31:93.29:0,93,1869	0/0:16,0:16:48.16:0,48,1007	0/0:34,0:34:99:0,102,2087	0/0:29,0:29:87.30:0,87,1825	0/0:24,0:24:72.25:0,72,1507	0/0:34,0:33:99:0,99,2073	0/0:13,0:13:33.11:0,33,692
chr10	22149908	.	CT	C	1332.32	PASS	AB=0.873;AC=13;AF=0.232;AN=56;BaseQRankSum=0.075;DP=627;FS=0.000;HRun=13;HaplotypeScore=93.3488;InbreedingCoeff=0.7139;MQ=67.88;MQ0=3;MQRankSum=2.693;QD=6.63;ReadPosRankSum=3.872;VQSLOD=2.6088;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,26:33:62.60:460,63,0	0/1:3,2:5:13:13,0,36	0/1:31,0:15:13.79:14,0,49	0/1:34,2:18:2.86:3,0,88	1/1:9,14:23:13.56:258,14,0	0/0:12,0:31:44.49:0,44,254	0/0:8,0:16:31.91:0,32,186	0/0:29,1:30:37.95:0,38,493	0/0:12,0:14:29.85:0,30,259	0/0:27,0:29:71.04:0,71,444	0/0:14,0:28:43.68:0,44,222	0/0:13,0:13:25.15:0,25,158	0/0:10,0:18:26.34:0,26,165	0/0:8,0:12:17.53:0,18,109	0/0:19,0:21:47.88:0,48,433	0/0:13,0:23:35.33:0,35,232	0/0:18,0:22:53.37:0,53,455	0/0:33,1:34:44.42:0,44,666	0/0:15,0:16:19.48:0,19,307	0/0:24,1:30:34.76:0,35,446	0/0:6,0:8:14.86:0,15,131	0/0:12,0:17:33.14:0,33,182	0/0:14,0:22:39.80:0,40,242	0/0:11,0:14:11.71:0,12,73	0/0:12,0:22:43.67:0,44,266	1/1:10,21:31:35.97:371,36,0	1/1:8,20:29:14.48:261,14,0	1/1:1,8:9:17.90:131,18,0
chr10	22151655	.	G	GGAGA	19713.95	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-15.827;DP=698;FS=4.348;HRun=0;HaplotypeScore=101.8438;InbreedingCoeff=0.9998;MQ=91.96;MQ0=0;MQRankSum=-5.507;QD=64.21;ReadPosRankSum=4.376;VQSLOD=7.2623;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:90.27:0,90,1626	0/0:9,0:9:27.05:0,27,477	0/0:26,0:26:72.17:0,72,1270	0/0:35,0:35:80.01:0,80,1348	0/0:30,0:30:87.28:0,87,1638	1/1:2,21:27:51.18:1341,51,0	1/1:3,22:26:60.21:1624,60,0	0/0:38,0:38:99:0,105,1871	0/0:22,0:22:63.20:0,63,1159	1/1:2,25:28:81.22:2048,81,0	1/1:2,15:21:48.16:1200,48,0	1/1:1,22:23:57.19:1476,57,0	1/1:0,25:26:65.96:1780,66,0	1/1:2,30:35:87.30:2353,87,0	0/0:27,0:27:81.28:0,81,1562	1/1:1,25:28:72.25:1892,72,0	0/0:19,0:19:57.20:0,57,1096	0/0:23,0:23:63.22:0,63,1197	0/0:18,0:18:54.18:0,54,1009	0/0:25,0:25:66.23:0,66,1270	0/0:28,0:28:81.23:0,81,1522	1/1:2,22:26:66.23:1698,66,0	1/1:0,23:25:63.22:1661,63,0	1/1:3,19:23:48.16:1258,48,0	1/1:0,19:19:51.18:1384,51,0	0/0:27,0:27:78.22:0,78,1428	0/0:23,0:23:69.24:0,69,1310	0/0:10,0:10:30.10:0,30,545
chr10	22151972	.	GACCCAGC	G	12692.04	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=5.989;DP=560;FS=2.170;HRun=0;HaplotypeScore=152.2331;InbreedingCoeff=0.8760;MQ=77.21;MQ0=0;MQRankSum=-7.583;QD=27.53;ReadPosRankSum=1.278;VQSLOD=4.8487;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:66.20:0,66,2145	1/1:7,4:11:21.04:344,21,0	0/0:30,0:30:26.74:0,27,475	0/0:21,0:20:9.02:0,9,146	0/0:17,0:17:18.06:0,18,533	1/1:5,14:19:29.97:587,30,0	1/1:9,20:29:21.07:482,21,0	1/1:27,0:27:30.01:392,30,0	1/1:11,5:16:33.10:628,33,0	1/1:9,15:24:45.15:950,45,0	1/1:13,8:21:9.03:207,9,0	1/1:7,18:25:39.13:895,39,0	1/1:12,17:29:48.16:1101,48,0	1/1:4,20:24:51.17:1133,51,0	1/1:14,12:26:51.13:1019,51,0	1/1:4,7:11:12.04:275,12,0	1/1:16,3:19:21.04:347,21,0	1/1:6,4:10:24.03:408,24,0	1/1:13,2:15:9.02:164,9,0	1/1:9,3:12:15.05:289,15,0	1/1:17,3:20:17.99:276,18,0	1/1:4,6:10:5.97:88,6,0	1/1:6,14:20:11.98:275,12,0	1/1:9,10:19:9.03:207,9,0	1/1:3,8:11:18.06:413,18,0	1/1:10,21:31:66.12:1264,66,0	1/1:9,14:23:27.09:605,27,0	1/1:2,7:9:15.05:344,15,0
chr10	22152051	.	GC	G	7499.53	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=8.331;DP=597;FS=4.330;HRun=1;HaplotypeScore=85.0621;InbreedingCoeff=0.9991;MQ=87.17;MQ0=0;MQRankSum=-1.743;QD=39.68;ReadPosRankSum=-0.374;VQSLOD=5.1300;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,102,1625	1/1:0,19:19:54.18:744,54,0	0/0:21,1:22:24.70:0,25,885	0/0:22,0:22:54.07:0,54,909	0/0:18,0:18:54.18:0,54,859	0/0:21,0:21:63.21:0,63,970	0/0:34,0:34:99:0,102,1599	1/1:0,26:26:78.26:1087,78,0	1/1:0,17:17:48.16:671,48,0	0/0:26,0:26:78.22:0,78,1190	0/0:14,0:14:42.14:0,42,669	0/0:18,0:18:48.16:0,48,767	0/0:20,0:20:51.16:0,51,778	0/0:28,0:28:75.24:0,75,1154	1/1:0,26:26:75.25:1040,75,0	0/0:24,0:24:72.25:0,72,1149	1/1:0,24:24:69.23:959,69,0	1/1:0,18:18:51.17:706,51,0	1/1:0,18:18:54.18:754,54,0	1/1:0,18:18:51.17:713,51,0	1/1:0,23:23:60.20:826,60,0	0/0:16,0:16:42.13:0,42,649	0/0:16,0:16:42.04:0,42,666	0/0:16,0:16:42.14:0,42,671	0/0:16,0:16:48.16:0,48,765	0/0:30,0:30:84.29:0,84,1339	0/0:25,0:25:66.22:0,66,1033	0/0:7,0:7:21.07:0,21,335
chr10	22152497	.	GACACACACACACAC	G	5596.16	PASS	AB=0.823;AC=24;AF=0.429;AN=56;BaseQRankSum=8.677;DP=506;FS=27.526;HRun=0;HaplotypeScore=194.2868;InbreedingCoeff=0.7160;MQ=65.76;MQ0=8;MQRankSum=-7.135;QD=25.32;ReadPosRankSum=2.773;VQSLOD=2.5452;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:33:14.53:0,15,749	0/0:4,0:5:10.59:0,11,477	0/0:32,0:22:12.04:0,12,563	0/0:26,0:17:21.07:0,21,748	0/0:15,0:18:27.08:0,27,1389	1/1:7,5:13:8.99:236,9,0	1/1:8,1:9:3.01:118,3,0	0/0:29,0:28:45.14:0,45,2116	0/0:10,0:19:14.44:0,14,749	1/1:18,2:21:8.70:334,9,0	1/1:11,9:20:15.05:592,15,0	1/1:10,10:20:24.08:885,24,0	0/1:13,10:23:26.97:573,0,27	1/1:11,10:21:21.07:747,21,0	0/0:6,0:19:33.11:0,33,1123	1/1:7,10:19:23.06:437,23,0	0/0:17,0:30:12.04:0,12,596	0/0:10,0:13:21.07:0,21,1070	0/0:12,0:12:9.03:0,9,554	0/0:8,0:15:14.98:0,15,515	0/0:13,0:12:15.05:0,15,612	1/1:5,4:9:12.04:393,12,0	1/1:6,2:16:3.62:280,4,0	1/1:10,3:13:6.02:237,6,0	1/1:9,8:18:18.06:690,18,0	0/1:18,1:19:73.25:73,0,2253	0/0:5,0:15:15.05:0,15,875	0/0:6,0:6:6.02:0,6,364
chr10	22152695	.	T	TA	10736.96	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-8.165;DP=472;FS=5.676;HRun=9;HaplotypeScore=42.2859;InbreedingCoeff=0.9625;MQ=78.32;MQ0=0;MQRankSum=-3.445;QD=25.81;ReadPosRankSum=1.690;VQSLOD=5.3495;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:38.97:0,39,339	1/1:0,5:5:15.04:166,15,0	0/0:14,0:13:20.99:0,21,182	0/0:8,0:9:16.97:0,17,124	0/0:16,0:16:41.01:0,41,340	1/1:3,22:25:57.15:630,57,0	1/1:1,13:14:39.11:431,39,0	1/1:6,22:27:43.13:704,43,0	1/1:3,11:14:33.09:365,33,0	1/1:5,20:25:37.11:638,37,0	1/1:4,14:18:45.12:493,45,0	1/1:2,16:18:45.12:498,45,0	1/1:2,17:19:51.14:564,51,0	1/1:4,16:20:42.11:465,42,0	1/1:2,21:23:31.10:571,31,0	1/1:2,11:13:33.08:360,33,0	1/1:2,12:14:27.07:299,27,0	1/1:3,17:20:45.12:498,45,0	1/1:3,11:14:10.04:339,10,0	1/1:3,18:22:10.94:538,11,0	1/1:2,9:11:27.07:299,27,0	1/1:1,9:10:27.07:299,27,0	1/1:6,14:20:42.11:463,42,0	1/1:0,11:11:30.08:332,30,0	1/1:5,19:25:53.98:578,54,0	1/1:7,18:25:63:675,63,0	1/1:5,11:16:33.98:367,34,0	1/1:0,6:6:15.04:166,15,0
chr10	22152910	.	GA	G	9520.96	PASS	AB=0.900;AC=49;AF=0.875;AN=56;BaseQRankSum=2.654;DP=505;FS=1.733;HRun=9;HaplotypeScore=58.5362;InbreedingCoeff=0.8278;MQ=85.17;MQ0=0;MQRankSum=-3.096;QD=21.30;ReadPosRankSum=1.466;VQSLOD=5.5664;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:42.07:0,42,460	1/1:0,5:5:15.01:137,15,0	0/0:20,0:20:33.05:0,33,366	0/1:16,2:18:36.26:36,0,291	0/0:23,0:23:60.18:0,60,692	1/1:3,18:21:48.02:439,48,0	1/1:4,10:14:27.01:247,27,0	1/1:2,22:24:66.01:598,66,0	1/1:0,11:11:33.02:302,33,0	1/1:7,23:30:68.40:612,68,0	1/1:3,16:19:39:357,39,0	1/1:1,14:15:33.02:302,33,0	1/1:2,15:17:42.02:384,42,0	1/1:1,15:16:42.02:384,42,0	1/1:5,13:18:36.01:329,36,0	1/1:2,15:17:45.02:412,45,0	1/1:6,26:32:72.01:658,72,0	1/1:2,20:23:56.06:500,56,0	1/1:3,11:14:33:298,33,0	1/1:3,25:28:75.03:686,75,0	1/1:1,11:12:33.02:302,33,0	1/1:2,11:13:33.01:302,33,0	1/1:2,21:23:25.19:487,25,0	1/1:0,7:7:21.01:192,21,0	1/1:2,20:22:60.03:549,60,0	1/1:2,17:19:50.95:456,51,0	1/1:2,17:19:42.02:384,42,0	1/1:2,8:10:18.01:164,18,0
chr10	22154427	.	T	TA	13035.81	PASS	AB=0.533;AC=47;AF=0.839;AN=56;BaseQRankSum=-4.930;DP=500;FS=2.916;HRun=8;HaplotypeScore=53.7722;InbreedingCoeff=0.8813;MQ=73.85;MQ0=0;MQRankSum=-2.233;QD=29.36;ReadPosRankSum=0.777;VQSLOD=5.0363;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:24.01:0,24,220	1/1:1,9:10:27.08:312,27,0	0/0:11,0:11:20.30:0,20,171	0/0:10,0:6:8.17:0,8,81	0/0:22,1:23:31.40:0,31,537	1/1:2,20:22:54.16:623,54,0	1/1:2,13:15:39.12:450,39,0	1/1:4,32:36:96.24:1076,96,0	1/1:2,19:22:48.14:553,48,0	1/1:3,19:22:51.13:577,51,0	1/1:2,19:21:54.16:623,54,0	0/1:1,7:8:3.31:218,0,3	1/1:1,14:15:39.12:450,39,0	1/1:1,14:16:41.96:465,42,0	1/1:2,14:16:39.12:450,39,0	1/1:1,13:14:39.12:450,39,0	1/1:1,18:19:54.16:623,54,0	1/1:3,16:19:45.07:503,45,0	1/1:3,10:13:33.07:359,33,0	1/1:4,23:27:69.20:796,69,0	1/1:1,13:14:36.11:416,36,0	1/1:1,16:17:48.14:554,48,0	1/1:3,13:16:39.12:450,39,0	1/1:0,5:5:15.04:173,15,0	1/1:2,25:27:66.20:762,66,0	1/1:0,23:23:69.20:795,69,0	1/1:5,26:31:50.76:838,51,0	1/1:1,15:16:45.13:519,45,0
chr10	22154782	.	AACACAC	A	985.94	PASS	AB=0.833;AC=21;AF=0.404;AN=52;BaseQRankSum=5.709;DP=508;FS=4.878;HRun=0;HaplotypeScore=116.8299;InbreedingCoeff=0.6668;MQ=62.47;MQ0=10;MQRankSum=-3.171;QD=5.57;ReadPosRankSum=0.748;VQSLOD=1.6541;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:18.02:0,18,362	0/1:4,1:5:48.69:49,0,229	./.	./.	0/0:11,0:17:5.38:0,5,103	1/1:11,0:15:9.03:130,9,0	1/1:10,0:11:1.55:4,2,0	0/0:29,0:28:11.69:0,12,220	0/0:16,0:16:20.62:0,21,444	1/1:12,6:18:14.97:201,15,0	0/0:11,2:12:0.12:0,0,2	1/1:15,3:18:6.02:121,6,0	1/1:5,6:12:8.92:136,9,0	1/1:17,5:22:2.97:20,3,0	0/0:19,0:19:29.94:0,30,744	1/1:10,0:21:18.04:220,18,0	0/0:19,0:20:21.07:0,21,376	0/0:17,0:22:22.63:0,23,486	0/0:15,0:15:9.03:0,9,184	0/0:19,0:18:17.69:0,18,362	0/0:19,0:18:14.87:0,15,327	0/0:8,0:13:5.20:0,5,167	1/1:10,7:16:2.96:40,3,0	1/1:15,8:23:3.27:61,3,0	1/1:10,4:14:9.03:181,9,0	0/0:19,0:19:27.09:0,27,650	0/0:17,0:16:15.02:0,15,336	0/0:3,0:3:9.03:0,9,215
chr10	22155008	.	TC	T	7845.17	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=12.129;DP=698;FS=5.570;HRun=3;HaplotypeScore=65.4066;InbreedingCoeff=0.9997;MQ=88.50;MQ0=0;MQRankSum=-6.622;QD=33.67;ReadPosRankSum=-0.308;VQSLOD=5.1492;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,160,2269	1/1:1,9:10:27.08:335,27,0	0/0:29,0:29:87.29:0,87,1233	0/0:22,0:22:57.12:0,57,761	0/0:26,0:26:75.25:0,75,1076	0/0:16,0:16:48.15:0,48,673	0/0:20,0:20:54.18:0,54,777	1/1:0,38:38:99:1339,111,0	1/1:1,18:19:39.12:483,39,0	0/0:25,0:25:75.25:0,75,1079	0/0:36,0:36:99:0,102,1467	0/0:19,0:19:54.18:0,54,777	0/0:29,0:29:84.28:0,84,1210	0/0:19,0:19:51.17:0,51,734	1/1:0,30:30:81.25:1004,81,0	0/0:26,0:26:78.23:0,78,1071	1/1:1,32:33:93.29:1153,93,0	1/1:0,21:21:54.17:670,54,0	1/1:1,20:21:60.19:744,60,0	1/1:2,24:26:72.23:893,72,0	1/1:2,33:35:99:1225,99,0	0/0:27,0:27:81.26:0,81,1146	0/0:13,0:13:39.13:0,39,562	0/0:23,0:23:66.22:0,66,950	0/0:24,0:24:72.24:0,72,1034	0/0:22,0:22:66.22:0,66,948	0/0:25,0:25:75.25:0,75,1078	0/0:10,0:10:30.10:0,30,432
chr10	22155695	.	GACAC	G	3601.61	PASS	AB=0.941;AC=30;AF=0.536;AN=56;BaseQRankSum=-4.800;DP=845;FS=2.737;HRun=0;HaplotypeScore=305.6460;InbreedingCoeff=-0.0983;MQ=58.63;MQ0=7;MQRankSum=-0.396;QD=5.36;ReadPosRankSum=5.635;VQSLOD=1.8998;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:59,0:60:33.24:0,33,474	1/1:6,2:9:9.02:115,9,0	0/0:32,0:22:3.48:0,3,42	0/0:23,0:18:2.97:0,3,20	1/1:21,0:27:20.01:150,20,0	0/1:31,2:33:89.67:90,0,149	0/1:32,0:32:19.82:80,0,20	0/1:30,0:30:7.01:80,0,7	1/1:15,11:28:48.53:642,49,0	0/1:28,1:29:99:133,0,158	0/1:18,1:19:21.51:60,0,22	0/1:47,3:50:99:132,0,329	0/1:32,2:35:99:226,0,300	0/1:30,1:31:99:140,0,116	0/1:25,1:35:11.38:138,0,11	0/1:53,3:55:82.58:83,0,368	1/1:26,2:28:6.98:241,7,0	1/1:3,1:6:9.01:89,9,0	1/1:21,5:23:24.64:334,25,0	1/1:12,3:17:14.83:164,15,0	0/1:37,7:43:43.67:58,0,44	0/1:32,2:34:29.55:261,0,30	1/1:25,2:27:5.21:207,5,0	0/1:45,1:46:52.81:96,0,53	0/1:26,1:27:32.52:81,0,33	0/0:22,0:24:32.99:0,33,490	0/0:25,0:25:45.43:0,45,761	0/0:8,0:8:5.99:0,6,85
chr10	22155733	.	TAC	T	5353.94	PASS	AB=0.922;AC=26;AF=0.464;AN=56;BaseQRankSum=-8.155;DP=1113;FS=1.387;HRun=0;HaplotypeScore=425.8468;InbreedingCoeff=0.5431;MQ=42.10;MQ0=34;MQRankSum=3.301;QD=9.77;ReadPosRankSum=-2.251;VQSLOD=3.6420;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:58,2:55:26.50:575,26,0	1/1:8,4:11:18.05:216,18,0	0/1:40,1:8:22.23:22,0,169	0/0:48,0:9:24.08:0,24,344	1/1:12,9:21:29.96:354,30,0	0/0:44,0:44:26.68:0,27,190	0/0:55,0:55:2.77:0,3,86	1/1:20,32:46:74.62:1095,75,0	1/1:8,27:34:41.33:449,41,0	0/0:49,0:47:6.43:0,6,169	0/0:38,0:37:6.63:0,7,54	0/0:66,0:65:28.49:0,28,342	0/0:46,0:46:31.70:0,32,264	0/0:56,0:56:23.59:0,24,161	1/1:26,10:36:74.87:903,75,0	0/0:79,0:77:47.66:0,48,360	1/1:25,2:27:46.43:545,46,0	1/1:2,14:17:7.50:172,7,0	1/1:11,14:21:42.12:496,42,0	1/1:1,14:15:11.95:138,12,0	0/1:23,43:56:1.35:1,0,14	0/1:48,0:48:2.31:2,0,91	0/1:33,0:33:4.56:17,0,5	0/0:48,0:48:9.45:0,9,94	0/0:33,0:32:9.55:0,10,76	0/1:25,0:24:16.53:317,0,17	0/1:33,1:32:51.79:52,0,55	0/0:3,0:3:1.55:0,2,4
chr10	22155735	.	C	CAT	2070.25	PASS	AB=0.905;AC=15;AF=0.268;AN=56;BaseQRankSum=-7.695;DP=1126;FS=10.047;HRun=0;HaplotypeScore=439.1546;InbreedingCoeff=0.0574;MQ=42.42;MQ0=33;MQRankSum=2.812;QD=6.27;ReadPosRankSum=3.910;VQSLOD=1.8292;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:52,1:54:99:460,0,102	1/1:12,0:11:5.26:33,5,0	0/0:42,0:7:7.82:0,8,177	0/0:51,0:12:27.09:0,27,396	0/1:21,0:21:15.64:41,0,16	0/0:45,0:45:28.76:0,29,283	0/0:56,0:56:81.59:0,82,582	0/1:51,1:46:72.59:501,0,73	0/0:35,0:34:5.34:0,5,80	0/0:49,0:47:57.17:0,57,578	0/0:39,0:38:49.68:0,50,409	0/0:64,0:63:13.84:0,14,546	0/0:47,0:47:21.93:0,22,439	0/0:57,0:57:41.51:0,42,397	0/1:36,0:36:7.04:191,0,7	0/0:80,0:78:63.10:0,63,602	0/1:27,0:27:53.49:90,0,53	0/1:17,0:17:24.66:25,0,33	0/1:26,0:21:59.41:140,0,59	1/1:16,0:16:0.56:11,1,0	0/0:66,0:57:3.57:0,4,30	0/0:48,0:48:10.43:0,10,268	0/0:33,0:33:31.90:0,32,262	0/0:48,0:48:19.85:0,20,148	0/0:34,0:33:26.38:0,26,246	0/1:13,13:26:5.32:409,0,5	0/1:12,22:32:48.48:280,0,48	1/1:3,0:3:2.93:43,3,0
chr10	22155736	.	A	ACACT	8423.10	PASS	AB=0.983;AC=25;AF=0.446;AN=56;BaseQRankSum=3.853;DP=1133;FS=0.305;HRun=0;HaplotypeScore=459.3449;InbreedingCoeff=0.8734;MQ=42.22;MQ0=33;MQRankSum=-6.301;QD=12.61;ReadPosRankSum=3.826;VQSLOD=2.7264;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:56,0:52:30.81:31,0,527	0/0:12,0:11:18.01:0,18,174	0/0:43,0:7:16.29:0,16,262	0/0:50,0:12:30.09:0,30,474	0/0:21,0:21:33.36:0,33,323	1/1:39,5:45:41.06:639,41,0	1/1:57,0:57:19.21:603,19,0	0/0:52,0:46:99:0,117,893	0/0:35,0:34:37.39:0,37,425	1/1:46,3:48:91.06:1121,91,0	1/1:36,2:38:27.75:498,28,0	1/1:58,11:68:35.14:1033,35,0	1/1:42,3:48:38.76:1097,39,0	1/1:52,3:57:25.28:575,25,0	0/0:36,0:36:80.57:0,81,791	1/1:72,5:78:78.95:1194,79,0	0/0:28,0:28:51.16:0,51,450	0/0:17,0:17:19.25:0,19,167	0/0:27,0:22:55.13:0,55,474	0/0:17,0:17:14.98:0,15,137	0/0:67,0:57:13.86:0,14,85	1/1:46,4:50:17.60:505,18,0	1/1:32,1:33:9.07:312,9,0	1/1:46,1:48:7.36:300,7,0	1/1:31,3:34:50.50:515,50,0	0/0:24,0:23:51.58:0,52,488	0/0:33,0:31:35.94:0,36,419	0/0:3,0:3:3.01:0,3,54
chr10	22155820	.	A	AAC	1935.20	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=5.642;DP=1090;FS=31.953;HRun=0;HaplotypeScore=212.2494;InbreedingCoeff=0.9328;MQ=50.32;MQ0=21;MQRankSum=-6.867;QD=15.73;ReadPosRankSum=-1.311;VQSLOD=1.6443;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,31:42:45.15:734,45,0	0/0:9,0:9:24.08:0,24,296	0/0:68,0:21:17:0,17,246	0/0:61,0:15:25.57:0,26,251	1/1:2,0:36:38.81:247,39,0	0/0:32,0:32:34.98:0,35,618	0/0:38,0:41:31.17:0,31,745	0/0:50,0:51:66.41:0,66,995	0/0:24,0:24:56.85:0,57,666	0/0:47,0:47:41.42:0,41,1078	0/0:34,0:34:49.41:0,49,813	0/0:52,0:53:65.58:0,66,1258	0/0:37,0:39:41.66:0,42,898	0/0:57,0:57:13.18:0,13,1090	1/1:6,38:43:4.40:1088,4,0	0/0:53,0:55:39.59:0,40,1081	0/0:31,0:31:72.07:0,72,808	0/0:23,0:24:44.98:0,45,577	0/0:25,0:22:57.17:0,57,688	0/0:21,0:21:51.15:0,51,614	0/0:63,1:65:68.99:0,69,1211	0/0:40,0:42:20.06:0,20,875	0/0:29,0:29:63.95:0,64,892	0/0:46,0:45:87.19:0,87,1036	0/0:37,0:38:45.15:0,45,807	0/0:26,0:25:60.17:0,60,712	0/0:26,0:26:69.19:0,69,832	0/0:12,0:12:36.11:0,36,442
chr10	22156998	.	T	TG	10975.22	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=21.419;DP=842;FS=0.000;HRun=1;HaplotypeScore=136.0332;InbreedingCoeff=0.9994;MQ=71.90;MQ0=3;MQRankSum=-2.921;QD=31.36;ReadPosRankSum=5.532;VQSLOD=4.3995;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,157,2139	0/0:17,0:17:48.13:0,48,651	0/0:37,0:35:99:0,105,1404	0/0:33,0:30:84.75:0,85,1143	0/0:34,0:34:99:0,102,1402	1/1:0,26:26:69.22:883,69,0	1/1:3,27:30:78.22:969,78,0	0/0:47,0:47:99:0,141,1923	0/0:29,0:29:84.26:0,84,1142	1/1:7,27:33:92.11:1157,92,0	1/1:3,18:21:54.55:641,55,0	1/1:1,29:30:68.51:868,69,0	1/1:0,29:29:75.09:937,75,0	1/1:1,32:33:74.76:957,75,0	0/0:25,0:25:75.22:0,75,1014	1/1:6,31:37:88.84:1115,89,0	0/0:29,0:29:78.19:0,78,1089	0/0:7,0:7:21.07:0,21,294	0/0:20,0:20:51.14:0,51,661	0/0:32,0:32:93.29:0,93,1267	0/0:41,0:41:99:0,120,1676	1/1:0,29:29:75.17:947,75,0	1/1:1,18:19:44.40:576,44,0	1/1:7,28:34:82.80:1022,83,0	1/1:4,23:26:72.21:904,72,0	0/0:39,2:41:43.93:0,44,1537	0/0:29,0:29:87.23:0,87,1160	0/0:16,0:16:42.11:0,42,566
chr10	22157880	.	T	TC	11352.11	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-17.406;DP=751;FS=3.159;HRun=6;HaplotypeScore=72.3415;InbreedingCoeff=0.9993;MQ=83.36;MQ0=0;MQRankSum=-2.341;QD=32.43;ReadPosRankSum=3.705;VQSLOD=5.1084;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:72.15:0,72,735	0/0:15,0:15:39.08:0,39,398	0/0:24,0:24:68.99:0,69,683	0/0:19,0:19:42.02:0,42,406	0/0:38,0:38:99:0,102,1034	1/1:4,16:20:48.15:604,48,0	1/1:2,24:26:69.22:868,69,0	0/0:32,0:32:93.20:0,93,944	0/0:33,0:33:93.18:0,93,934	1/1:2,25:27:72.20:889,72,0	1/1:3,18:21:51.16:641,51,0	1/1:0,40:40:99:1434,114,0	1/1:3,24:27:66.21:831,66,0	1/1:3,31:34:93.30:1170,93,0	0/0:31,0:31:81.16:0,81,820	1/1:1,40:41:99:1283,102,0	0/0:27,0:27:81.18:0,81,826	0/0:19,0:19:54.12:0,54,551	0/0:16,0:16:39.08:0,39,398	0/0:24,0:24:66.15:0,66,673	0/0:24,0:24:66.15:0,66,673	1/1:4,20:24:30.15:617,30,0	1/1:2,17:19:51.16:642,51,0	1/1:1,35:36:96.31:1207,96,0	1/1:3,31:35:93.30:1167,93,0	0/0:32,0:32:87.19:0,87,886	0/0:29,0:29:84.19:0,84,856	0/0:7,0:7:21.05:0,21,214
chr10	22160097	.	A	AAAAC	11443.22	PASS	AB=0.786;AC=25;AF=0.446;AN=56;BaseQRankSum=-13.158;DP=705;FS=3.521;HRun=0;HaplotypeScore=127.5653;InbreedingCoeff=0.8292;MQ=67.83;MQ0=2;MQRankSum=-0.214;QD=31.44;ReadPosRankSum=-1.090;VQSLOD=4.1756;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:24:36.01:0,36,324	0/0:12,0:12:27.09:0,27,425	0/1:28,0:25:0:0,0,0	0/0:21,0:19:8.59:0,9,63	0/0:11,0:36:69.02:0,69,632	0/1:10,9:19:17.15:611,0,17	1/1:14,11:26:27.09:641,27,0	0/0:27,0:27:15.04:0,15,215	0/0:20,0:20:36.09:0,36,521	1/1:14,15:32:60.15:1193,60,0	1/1:11,13:24:42.14:962,42,0	1/1:11,11:23:24.08:556,24,0	1/1:5,12:17:33.11:783,33,0	1/1:9,21:31:69.24:1633,69,0	1/1:13,13:26:33.11:784,33,0	0/1:18,15:34:2.10:953,0,2	0/0:31,0:31:48.14:0,48,731	0/0:32,0:32:48.08:0,48,809	0/0:19,0:18:8.15:0,8,140	0/0:29,0:29:33.07:0,33,453	0/0:18,0:18:27.09:0,27,423	1/1:8,11:20:30.10:697,30,0	1/1:17,18:38:9.98:1228,10,0	1/1:8,10:18:27.09:641,27,0	1/1:14,14:28:13.17:761,13,0	0/0:14,0:34:57.05:0,57,526	0/0:6,0:21:38.62:0,39,363	0/0:8,0:17:26.94:0,27,251
chr10	22160935	.	GA	G	21859.84	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=1.536;DP=736;FS=3.704;HRun=5;HaplotypeScore=106.0394;InbreedingCoeff=0.9937;MQ=85.63;MQ0=1;MQRankSum=-10.868;QD=31.82;ReadPosRankSum=6.124;VQSLOD=4.2677;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,38:39:99:1293,114,0	1/1:0,10:10:21.06:238,21,0	0/0:17,0:17:43.81:0,44,513	0/0:32,0:31:81.26:0,81,1072	1/1:0,40:40:99:1327,117,0	1/1:1,15:16:45.13:510,45,0	1/1:1,22:23:63.18:715,63,0	1/1:2,29:31:87.23:977,87,0	1/1:1,35:36:99:1191,105,0	1/1:0,34:34:99:1148,102,0	1/1:1,21:22:63.18:714,63,0	1/1:2,28:30:75.21:851,75,0	1/1:1,35:36:99:1123,99,0	1/1:0,29:29:81.23:919,81,0	1/1:1,31:32:90.26:1021,90,0	1/1:2,29:31:84.24:953,84,0	1/1:2,33:35:99:1123,99,0	1/1:0,18:18:54.15:612,54,0	1/1:1,18:19:54.14:604,54,0	1/1:1,33:34:93.26:1055,93,0	1/1:0,29:29:84.24:953,84,0	1/1:1,28:29:84.24:953,84,0	1/1:1,13:14:39.07:428,39,0	1/1:1,23:24:66.19:749,66,0	1/1:0,17:17:51.15:579,51,0	1/1:1,22:23:66.16:736,66,0	1/1:1,29:30:78.22:885,78,0	1/1:0,6:6:18.05:204,18,0
chr10	22161396	.	GA	G	2517.66	PASS	AB=0.867;AC=25;AF=0.446;AN=56;BaseQRankSum=11.225;DP=634;FS=0.342;HRun=12;HaplotypeScore=87.8560;InbreedingCoeff=0.7713;MQ=75.55;MQ0=4;MQRankSum=-2.161;QD=8.15;ReadPosRankSum=2.632;VQSLOD=2.8077;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:23:16.38:48,16,0	0/1:2,4:6:15.50:78,0,15	0/0:28,0:22:5.90:0,6,202	0/0:14,0:13:10.09:0,10,95	1/1:31,1:32:1.84:154,2,0	0/0:20,0:20:42.08:0,42,422	0/0:16,0:16:39.07:0,39,390	1/1:11,14:25:41.88:312,42,0	1/1:4,19:24:25.37:370,25,0	0/0:23,0:25:59.93:0,60,582	0/0:24,1:25:39.89:0,40,586	0/0:27,0:28:71.94:0,72,694	0/0:31,1:32:58.36:0,58,753	0/0:28,0:29:77.98:0,78,767	1/1:19,0:19:28.52:82,29,0	0/0:26,1:28:57.74:0,58,740	1/1:6,16:22:32.83:255,33,0	1/1:4,19:24:19.53:324,20,0	1/1:9,18:27:52.74:401,53,0	1/1:9,19:29:33.54:423,34,0	1/1:5,12:17:7.60:231,8,0	0/0:15,0:14:36.05:0,36,351	0/0:20,0:20:47.09:0,47,446	0/0:20,0:20:45.08:0,45,452	0/0:22,1:24:42.71:0,43,584	0/1:24,0:26:2.93:3,0,104	1/1:25,0:25:13.75:39,14,0	0/1:9,0:9:3.04:8,0,3
chr10	22161403	.	AAAAAAG	A	1741.27	PASS	AB=1.000;AC=6;AF=0.107;AN=56;BaseQRankSum=6.632;DP=641;FS=0.000;HRun=0;HaplotypeScore=151.7829;InbreedingCoeff=0.6522;MQ=70.13;MQ0=5;MQRankSum=-6.236;QD=20.25;ReadPosRankSum=1.600;VQSLOD=2.7002;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,23:24:31.65:581,32,0	0/0:7,0:7:21.07:0,21,482	0/0:30,0:19:14.29:0,14,741	0/1:13,0:10:3.57:4,0,328	0/1:30,0:30:37.87:377,0,38	0/0:19,0:19:54.14:0,54,1300	0/0:17,0:17:45.15:0,45,1308	0/0:26,0:26:61.33:0,61,987	0/0:24,0:24:65.71:0,66,1364	0/0:26,0:26:69.23:0,69,1862	0/0:28,0:28:81.25:0,81,2284	0/0:25,0:25:75.21:0,75,2079	0/0:33,0:33:96.30:0,96,2681	0/0:28,0:28:84.27:0,84,2432	1/1:1,18:18:45.15:912,45,0	0/0:30,0:30:87.75:0,88,2434	0/0:21,0:21:42.10:0,42,808	0/0:27,0:27:68.63:0,69,1116	0/0:23,0:22:62.16:0,62,1110	0/0:28,0:28:72.42:0,72,1379	0/0:18,0:18:44.01:0,44,1005	0/0:18,0:17:51.10:0,51,1205	0/0:21,0:21:62.23:0,62,1693	0/0:21,0:21:54.18:0,54,1602	0/0:24,0:24:72.22:0,72,1955	0/0:27,0:27:13.03:0,13,385	0/0:24,0:24:23.54:0,24,169	0/0:10,0:10:16.83:0,17,80
chr10	22161404	.	AAAAAG	A	2060.45	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=7.647;DP=644;FS=1.464;HRun=0;HaplotypeScore=138.2360;InbreedingCoeff=0.4636;MQ=69.37;MQ0=5;MQRankSum=-3.961;QD=10.62;ReadPosRankSum=-0.982;VQSLOD=2.9841;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:24:28.39:329,28,0	0/0:7,0:7:21.07:0,21,387	0/0:30,0:18:27.79:0,28,598	0/1:13,0:10:15.62:16,0,293	1/1:9,21:30:32.13:1089,32,0	0/0:19,0:19:51.12:0,51,1074	0/0:16,0:16:45.14:0,45,1137	0/1:26,0:26:32.29:32,0,666	0/0:24,0:24:42.98:0,43,1005	0/0:25,0:25:66.21:0,66,1554	0/0:28,0:28:78.24:0,78,1915	0/0:25,0:25:75.22:0,75,1798	0/0:34,0:34:93.27:0,93,2249	0/0:28,0:28:84.27:0,84,2099	1/1:19,0:18:44.93:543,45,0	0/0:31,0:31:88.71:0,89,2077	0/0:21,0:21:36.97:0,37,545	0/0:27,0:27:33.49:0,33,771	0/0:23,0:22:13.58:0,14,683	0/1:28,0:28:1.16:1,0,837	0/0:18,0:18:43.67:0,44,760	0/0:18,0:17:48.11:0,48,1043	0/0:21,0:21:58.44:0,58,1412	0/0:21,0:21:54.15:0,54,1368	0/0:24,0:24:69.20:0,69,1659	0/1:30,0:30:99:192,0,203	0/1:24,0:24:6.81:19,0,7	0/0:10,0:10:0.15:0,0,7
chr10	22161406	.	AAAG	A	2512.54	PASS	AB=0.895;AC=12;AF=0.214;AN=56;BaseQRankSum=8.463;DP=648;FS=10.068;HRun=0;HaplotypeScore=112.9707;InbreedingCoeff=0.7851;MQ=67.93;MQ0=5;MQRankSum=-6.901;QD=16.53;ReadPosRankSum=0.456;VQSLOD=3.0315;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:24:15.76:210,16,0	0/0:7,0:7:21.01:0,21,234	0/0:28,0:16:12.41:0,12,407	0/1:13,0:10:9.77:10,0,193	1/1:32,0:32:44.51:572,45,0	0/0:20,0:20:54.02:0,54,798	0/0:15,0:15:45.11:0,45,801	0/0:26,0:26:59.62:0,60,500	0/0:24,0:24:64.39:0,64,587	0/0:26,0:26:69.12:0,69,1123	0/0:29,0:29:84.16:0,84,1376	0/0:26,0:26:67.21:0,67,1258	0/0:35,0:35:96.18:0,96,1608	0/0:28,0:28:84.21:0,84,1454	1/1:19,0:18:44.96:383,45,0	0/0:31,0:31:60.55:0,61,1392	0/0:20,0:20:38.93:0,39,344	0/0:28,0:28:67.15:0,67,509	0/0:23,0:22:59.34:0,59,515	0/0:29,0:29:69.07:0,69,676	0/0:18,0:18:39.82:0,40,460	0/0:19,0:18:50.75:0,51,760	0/0:21,0:21:58.01:0,58,969	0/0:19,0:19:57.13:0,57,982	0/0:24,0:24:63.10:0,63,1102	0/1:22,8:30:40.48:715,0,40	1/1:4,20:24:42.61:577,43,0	1/1:1,9:10:16.30:225,16,0
chr10	22162968	.	A	AC	2206.41	PASS	AB=0.645;AC=14;AF=0.250;AN=56;BaseQRankSum=-6.362;DP=500;FS=1.820;HRun=0;HaplotypeScore=123.5243;InbreedingCoeff=0.7107;MQ=69.70;MQ0=0;MQRankSum=-6.589;QD=14.81;ReadPosRankSum=-1.399;VQSLOD=4.6411;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:26.39:0,26,167	1/1:2,4:6:9.35:116,9,0	0/0:14,0:13:7.26:0,7,319	0/0:5,0:5:11.63:0,12,167	0/0:28,0:28:80.08:0,80,580	0/0:20,0:19:50.07:0,50,351	0/0:5,0:5:14.80:0,15,123	1/1:18,22:40:59.17:598,59,0	0/1:8,11:19:34.26:233,0,34	0/0:27,0:27:76.94:0,77,564	0/0:14,0:14:41.53:0,42,290	0/0:21,0:21:50.17:0,50,369	0/0:26,0:26:55.95:0,56,440	0/0:11,0:11:26.70:0,27,190	0/0:28,0:28:65.22:0,65,483	0/0:23,0:23:59.70:0,60,481	1/1:6,8:14:3.07:160,3,0	1/1:4,12:15:7.11:274,7,0	0/1:10,11:21:12.96:309,0,13	1/1:5,20:25:8.91:468,9,0	1/1:0,8:8:24.02:223,24,0	0/0:14,0:14:41.06:0,41,294	0/0:15,0:15:30.59:0,31,209	0/0:6,0:6:11.93:0,12,90	0/0:27,0:27:77.12:0,77,550	0/0:12,0:12:34.74:0,35,234	0/0:25,0:25:67.91:0,68,451	0/0:19,0:19:41.46:0,41,288
chr10	22162970	.	A	AAAG	24072.44	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-3.432;DP=512;FS=15.860;HRun=0;HaplotypeScore=65.9929;InbreedingCoeff=0.8141;MQ=69.64;MQ0=0;MQRankSum=-6.350;QD=48.83;ReadPosRankSum=4.027;VQSLOD=5.5603;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,10:12:24.08:483,24,0	1/1:2,0:6:18.05:331,18,0	0/0:14,0:13:2.13:0,2,334	0/0:5,0:5:11.07:0,11,136	1/1:0,27:27:75.19:1494,75,0	1/1:1,19:20:48.16:1018,48,0	1/1:1,4:5:12.04:254,12,0	1/1:20,0:42:99:1742,99,0	1/1:8,0:19:48.08:827,48,0	1/1:0,26:27:75.26:1569,75,0	1/1:0,14:14:42.14:853,42,0	1/1:1,19:20:45.15:954,45,0	1/1:2,23:27:56.56:1153,57,0	1/1:0,12:12:27.09:573,27,0	1/1:1,28:29:63.22:1336,63,0	1/1:2,22:24:54.19:1146,54,0	1/1:6,0:14:33.08:575,33,0	1/1:4,0:15:42.08:778,42,0	1/1:11,0:22:51.10:873,51,0	1/1:5,0:25:75.22:1376,75,0	1/1:0,0:8:24.08:486,24,0	1/1:1,14:16:38.96:706,39,0	1/1:1,14:15:30.10:635,30,0	1/1:1,6:7:9.03:191,9,0	1/1:0,27:27:78.27:1655,78,0	1/1:0,13:13:39.12:789,39,0	1/1:1,24:26:69.24:1451,69,0	1/1:1,18:19:38.93:827,39,0
chr10	22163142	.	G	GAAA	5728.05	PASS	AB=0.794;AC=22;AF=0.393;AN=56;BaseQRankSum=1.180;DP=475;FS=2.943;HRun=11;HaplotypeScore=77.5716;InbreedingCoeff=0.8617;MQ=65.84;MQ0=2;MQRankSum=-1.364;QD=26.04;ReadPosRankSum=-3.544;VQSLOD=3.2680;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,0:14:31.13:232,31,0	1/1:1,2:5:9.03:150,9,0	0/0:7,0:6:8.02:0,8,64	0/1:7,0:6:0.47:0,0,30	1/1:5,2:28:61.44:479,61,0	0/0:23,0:24:50.93:0,51,578	0/0:9,0:9:27.07:0,27,305	1/1:10,23:39:91.48:1493,91,0	1/1:5,9:16:21.99:346,22,0	0/0:17,0:20:35.98:0,36,433	0/0:21,0:21:47.99:0,48,561	0/0:13,0:13:26.95:0,27,302	0/0:19,0:19:57.11:0,57,640	0/0:13,0:14:39.03:0,39,438	0/1:6,0:20:12.88:13,0,48	0/0:15,0:16:42.04:0,42,473	1/1:4,11:15:39.11:700,39,0	1/1:4,9:16:24.06:393,24,0	1/1:9,6:22:45.90:618,46,0	1/1:5,21:28:73.67:1178,74,0	1/1:2,1:8:11.98:125,12,0	0/0:13,0:14:22.53:0,23,276	0/0:17,0:20:43.68:0,44,523	0/0:7,0:9:16.50:0,16,180	0/0:16,0:16:37.60:0,38,451	0/0:19,0:19:57.17:0,57,666	0/0:23,0:23:57.01:0,57,651	0/0:7,0:9:26.95:0,27,281
chr10	22165979	.	TA	T	1504.14	PASS	AB=0.872;AC=26;AF=0.464;AN=56;BaseQRankSum=5.141;DP=671;FS=1.600;HRun=1;HaplotypeScore=231.0430;InbreedingCoeff=0.6219;MQ=63.57;MQ0=1;MQRankSum=1.439;QD=3.96;ReadPosRankSum=9.318;VQSLOD=-0.3981;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:42.14:0,42,668	0/0:8,0:8:3.74:0,4,10	0/0:26,0:18:29.39:0,29,676	0/0:26,0:18:51.10:0,51,783	0/0:28,0:27:15.46:0,15,53	0/1:22,4:26:9.38:42,0,9	1/1:19,7:25:15.44:154,15,0	0/0:37,0:37:43.54:0,44,169	0/0:26,0:26:8.72:0,9,23	1/1:23,8:31:34.39:245,34,0	0/1:10,1:11:1.98:33,0,2	0/1:24,7:31:3.55:65,0,4	0/1:34,7:41:1.96:127,0,2	1/1:23,4:27:15.50:112,16,0	0/0:37,0:37:11.72:0,12,48	1/1:23,7:30:3.62:71,4,0	0/0:14,0:14:5.22:0,5,46	0/1:7,0:7:2.05:2,0,13	0/0:16,0:16:13.29:0,13,50	0/0:32,0:32:19.19:0,19,65	0/0:24,0:24:22.94:0,23,99	1/1:25,7:32:13.70:103,14,0	0/1:15,6:21:1.86:28,0,2	1/1:17,3:20:18.09:90,18,0	1/1:18,2:20:12.44:77,12,0	1/1:12,10:22:34.13:231,34,0	1/1:7,17:24:30.14:228,30,0	1/1:7,4:11:15.49:92,15,0
chr10	22165980	.	AGATATATG	A	10344.59	PASS	AB=0.998;AC=36;AF=0.643;AN=56;BaseQRankSum=-12.499;DP=669;FS=15.389;HRun=0;HaplotypeScore=265.1959;InbreedingCoeff=-0.2516;MQ=62.79;MQ0=1;MQRankSum=-0.795;QD=16.74;ReadPosRankSum=-1.331;VQSLOD=2.3266;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:17,0:17:32.59:33,0,428	1/1:0,8:8:9.03:271,9,0	0/0:26,0:18:50.72:0,51,725	0/0:25,0:17:48.49:0,48,820	1/1:0,27:27:30.10:902,30,0	0/1:27,0:27:38.68:39,0,1041	0/1:28,0:27:99:366,0,243	1/1:0,37:37:99:1820,111,0	1/1:1,25:26:21.07:632,21,0	0/1:31,0:31:99:565,0,497	0/1:12,0:12:67.73:68,0,547	0/1:31,0:31:98.01:98,0,1039	0/1:40,0:40:99:272,0,1340	0/1:27,0:27:99:175,0,618	1/1:0,36:36:18.06:535,18,0	0/1:30,1:31:99:185,0,1094	1/1:14,0:14:36.08:580,36,0	1/1:7,0:7:21.07:364,21,0	1/1:2,14:15:42.14:824,42,0	1/1:0,31:31:42.08:1191,42,0	1/1:23,0:23:48.11:734,48,0	0/1:31,0:31:99:108,0,1181	0/1:21,0:21:69.45:69,0,484	0/1:20,0:20:99:103,0,699	0/1:20,0:20:51.09:51,0,846	0/1:22,0:22:99:229,0,165	0/1:24,0:24:81.05:81,0,244	0/1:11,0:11:51.66:52,0,75
chr10	22165981	.	GATA	G	3722.04	PASS	AB=0.845;AC=38;AF=0.679;AN=56;BaseQRankSum=-4.296;DP=671;FS=6.942;HRun=0;HaplotypeScore=241.7530;InbreedingCoeff=-0.0074;MQ=61.95;MQ0=1;MQRankSum=-3.383;QD=6.16;ReadPosRankSum=0.316;VQSLOD=1.8531;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:41.84:0,42,703	1/1:8,0:8:8.93:62,9,0	0/0:26,0:18:47.73:0,48,939	0/0:24,0:16:45.62:0,46,979	1/1:27,0:26:29.76:206,30,0	0/1:24,4:28:49.66:50,0,303	0/1:21,7:27:33.24:248,0,33	1/1:37,0:37:13.88:134,14,0	1/1:26,0:26:20.83:144,21,0	0/1:22,8:30:50.66:335,0,51	0/1:13,1:14:39.19:39,0,139	0/1:24,7:31:85.73:86,0,286	0/1:33,7:40:99:164,0,378	0/1:23,4:27:99:174,0,132	1/1:36,0:36:17.80:121,18,0	0/1:24,7:31:99:102,0,269	1/1:13,0:13:7.74:57,8,0	1/1:7,0:7:12.30:47,12,0	1/1:15,0:14:32.98:138,33,0	1/1:31,0:31:38.68:268,39,0	1/1:23,0:23:11.69:65,12,0	0/1:25,7:32:72.02:72,0,319	0/1:16,6:22:41.82:42,0,140	0/1:17,3:20:65.06:65,0,164	0/1:18,2:20:68.52:69,0,188	1/1:13,10:23:17.55:390,18,0	1/1:7,17:24:49.92:470,50,0	1/1:7,4:11:19.24:173,19,0
chr10	22166139	.	TACACAC	T	2327.71	PASS	AB=0.927;AC=14;AF=0.250;AN=56;BaseQRankSum=-2.838;DP=529;FS=0.591;HRun=0;HaplotypeScore=156.9907;InbreedingCoeff=-0.0155;MQ=58.38;MQ0=9;MQRankSum=0.562;QD=10.35;ReadPosRankSum=1.369;VQSLOD=2.3628;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:14.83:0,15,252	0/1:10,0:11:11.41:28,0,11	0/0:29,0:17:6.02:0,6,125	0/0:15,0:9:3.01:0,3,85	0/0:22,0:22:14.04:0,14,135	0/1:14,0:14:61.61:68,0,62	0/1:12,0:11:14.65:74,0,15	0/1:27,3:31:99:662,0,117	0/1:16,0:16:18.82:262,0,19	0/1:29,0:28:7.46:7,0,384	0/0:25,0:25:19.76:0,20,269	0/0:13,0:13:6.21:0,6,161	0/0:26,0:26:20.97:0,21,230	0/0:16,0:15:23.84:0,24,287	1/1:30,0:30:36.12:597,36,0	0/0:16,0:16:24.05:0,24,456	0/1:12,1:14:48.35:158,0,48	0/1:5,1:7:15.98:88,0,16	1/1:12,0:11:3.46:65,3,0	0/1:33,2:34:37.18:255,0,37	0/1:12,0:13:15.78:223,0,16	0/0:18,0:17:20.40:0,20,253	0/0:27,0:27:29.99:0,30,540	0/0:6,0:6:8.92:0,9,117	0/0:20,0:20:21.03:0,21,271	0/0:21,0:21:41.17:0,41,1066	0/0:23,0:22:18.06:0,18,454	0/0:10,0:9:11.93:0,12,290
chr10	22166167	.	CACACACAGAGAGAGAG	C	2838.24	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=-5.543;DP=584;FS=8.456;HRun=0;HaplotypeScore=220.7191;InbreedingCoeff=-0.0466;MQ=45.19;MQ0=12;MQRankSum=1.537;QD=12.96;ReadPosRankSum=-3.194;VQSLOD=0.8494;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:15.04:0,15,602	0/0:13,0:13:4.10:0,4,995	0/0:15,0:4:12.04:0,12,308	0/0:10,0:4:9.50:0,10,244	0/0:21,0:21:14.97:0,15,742	0/1:23,0:22:44.22:44,0,430	0/1:15,0:14:49.68:50,0,158	0/1:45,0:45:99:589,0,2077	0/1:14,0:13:99:198,0,348	0/0:34,0:30:28.17:0,28,2202	0/0:29,0:29:23.20:0,23,548	0/0:17,0:17:23.99:0,24,688	0/0:20,0:20:21.06:0,21,787	0/0:18,0:17:23.94:0,24,585	1/1:3,29:32:36.12:1701,36,0	0/0:21,0:21:24.05:0,24,1037	0/1:14,0:14:28.66:29,0,1110	0/1:10,0:10:15.38:15,0,616	0/1:10,0:8:51.66:52,0,195	0/1:42,0:41:97.59:98,0,2701	0/1:14,0:14:99:217,0,625	0/0:21,0:21:21.07:0,21,720	0/0:29,0:29:30.07:0,30,1300	0/0:9,0:9:9.92:0,10,404	0/0:31,0:31:25.31:0,25,577	0/0:28,0:28:65.64:0,66,2732	0/0:23,0:23:24.08:0,24,983	0/0:8,0:7:12.04:0,12,813
chr10	22166183	.	G	GAGAGAGAGAC	7264.59	PASS	AB=0.815;AC=35;AF=0.625;AN=56;BaseQRankSum=-7.493;DP=632;FS=23.841;HRun=0;HaplotypeScore=191.1498;InbreedingCoeff=-0.1613;MQ=50.04;MQ0=11;MQRankSum=0.721;QD=12.72;ReadPosRankSum=-0.749;VQSLOD=2.4319;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:3,0:16:0.88:63,0,1	0/1:14,0:14:11.01:37,0,11	0/0:13,0:6:11.91:0,12,175	0/0:15,0:5:8.23:0,8,110	0/1:30,0:30:32.09:130,0,32	1/1:6,19:29:2.93:94,3,0	0/1:8,0:17:6.81:14,0,7	0/1:16,0:39:59.06:859,0,59	0/1:14,0:13:33.69:96,0,34	1/1:15,0:33:35.18:976,35,0	0/1:8,0:28:15.75:107,0,16	1/1:11,0:21:3.22:12,3,0	1/1:10,0:25:9.03:332,9,0	0/1:8,0:18:2.40:108,0,2	0/0:33,0:33:36.12:0,36,752	1/1:6,0:27:15.05:573,15,0	0/1:16,0:16:38.01:289,0,38	0/1:10,0:10:29.33:133,0,29	0/1:9,0:9:48.07:81,0,48	0/1:41,0:40:29.32:299,0,29	1/1:12,0:12:10.97:261,11,0	0/1:8,0:22:33.69:104,0,34	1/1:8,0:29:15.05:522,15,0	0/1:3,0:12:19.36:106,0,19	1/1:6,0:34:6.02:157,6,0	1/1:6,21:30:38.58:1585,39,0	1/1:8,1:28:8.86:275,9,0	0/1:9,0:8:16.89:52,0,17
chr10	22166185	.	G	GAC	797.74	PASS	AB=0.971;AC=20;AF=0.357;AN=56;BaseQRankSum=6.785;DP=634;FS=28.943;HRun=0;HaplotypeScore=161.3213;InbreedingCoeff=-0.3983;MQ=50.82;MQ0=11;MQRankSum=-2.603;QD=1.80;ReadPosRankSum=3.394;VQSLOD=1.0201;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:15:8.20:49,8,0	0/1:15,0:15:18.01:18,0,123	0/0:17,0:9:10.70:0,11,91	0/0:15,0:5:1.42:0,1,24	0/1:4,25:30:15.82:204,0,16	0/1:30,0:29:10.18:10,0,32	0/1:17,0:16:18.63:20,0,19	0/1:37,0:37:99:162,0,141	0/0:14,0:13:6.39:0,6,163	0/0:37,0:33:8.44:0,8,326	0/1:28,0:28:3.09:41,0,3	0/0:22,0:22:13.83:0,14,116	0/1:25,0:24:39.27:39,0,79	0/1:17,0:17:9.93:12,0,10	0/0:35,0:35:44.93:0,45,367	0/1:26,0:26:32.36:32,0,51	0/1:16,0:16:71.19:71,0,100	0/1:10,0:10:1.50:1,0,104	0/0:10,0:10:11.02:0,11,73	0/1:42,0:41:81.93:82,0,271	0/1:12,0:12:64.37:69,0,64	0/1:21,0:21:12.86:13,0,78	0/1:28,0:28:23.57:47,0,24	0/0:12,0:12:2.95:0,3,57	0/1:34,0:34:6.16:39,0,6	0/0:30,0:30:0.39:0,0,292	0/1:29,0:29:19.56:20,0,70	0/1:9,0:8:20.25:20,0,81
chr10	22166647	.	ACAG	A	22387.46	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-0.313;DP=534;FS=3.601;HRun=0;HaplotypeScore=107.8388;InbreedingCoeff=0.9808;MQ=77.52;MQ0=0;MQRankSum=-8.877;QD=44.42;ReadPosRankSum=5.300;VQSLOD=6.4071;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,13:14:36.12:614,36,0	1/1:0,6:6:15.05:256,15,0	0/0:19,0:19:57.20:0,57,1207	0/0:11,0:11:26.92:0,27,582	1/1:0,19:19:57.20:970,57,0	1/1:2,28:30:63.22:1072,63,0	1/1:0,15:15:42.14:716,42,0	1/1:3,33:36:96.33:1631,96,0	1/1:0,18:18:45.15:767,45,0	1/1:0,20:20:60.21:1008,60,0	1/1:2,15:17:42.14:713,42,0	1/1:0,18:18:42.14:716,42,0	1/1:1,24:25:66.23:1125,66,0	1/1:1,20:21:54.18:921,54,0	1/1:1,22:23:54.18:921,54,0	1/1:2,22:24:60.21:1022,60,0	1/1:1,18:19:45.15:767,45,0	1/1:0,7:7:21.07:358,21,0	1/1:1,11:12:33.08:532,33,0	1/1:2,23:25:66.23:1124,66,0	1/1:1,19:20:45.15:768,45,0	1/1:0,24:24:72.25:1226,72,0	1/1:0,23:23:66.23:1125,66,0	1/1:0,13:13:30.10:512,30,0	1/1:0,16:16:48.16:817,48,0	1/1:1,28:29:84.29:1432,84,0	1/1:2,22:24:60.21:1023,60,0	1/1:1,5:6:15.05:256,15,0
chr10	22166801	.	CT	C	165.01	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=1.843;DP=426;FS=0.000;HRun=3;HaplotypeScore=200.5383;InbreedingCoeff=0.7427;MQ=68.61;MQ0=0;MQRankSum=-1.204;QD=9.17;ReadPosRankSum=1.102;VQSLOD=0.9768;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:7:10.90:0,11,76	0/0:16,0:16:44.68:0,45,381	0/0:14,0:14:26.35:0,26,363	0/0:10,0:10:20.28:0,20,294	0/0:21,0:21:56.48:0,56,591	0/0:12,0:12:35.85:0,36,303	0/0:5,0:5:12.73:0,13,83	0/0:21,0:21:59.59:0,60,450	0/0:10,0:10:29.87:0,30,253	0/0:10,0:10:30.01:0,30,289	0/0:29,0:29:77.94:0,78,716	0/0:14,0:14:41.82:0,42,357	0/0:16,0:16:44.66:0,45,349	0/0:18,0:18:53.85:0,54,480	1/1:10,8:18:23.93:258,24,0	0/0:19,0:19:56.61:0,57,455	0/0:8,0:8:15.70:0,16,100	0/0:9,0:9:14.97:0,15,133	0/0:18,0:18:43.15:0,43,380	0/0:32,0:32:88.30:0,88,741	0/0:1,0:1:3:0,3,28	0/0:17,0:17:44.73:0,45,370	0/0:18,0:18:47.85:0,48,423	0/0:6,0:6:12.40:0,12,98	0/0:20,0:20:50.80:0,51,436	0/0:20,0:20:54.05:0,54,501	0/0:29,0:29:86.88:0,87,786	0/0:8,0:8:12.03:0,12,127
chr10	22166805	.	A	AAAAAAAACAAACAAAC	81711.10	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-2.594;DP=533;FS=17.647;HRun=0;HaplotypeScore=235.5673;InbreedingCoeff=0.9020;MQ=61.43;MQ0=0;MQRankSum=-7.071;QD=160.22;ReadPosRankSum=4.544;VQSLOD=3.6198;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,1:13:24.08:1414,24,0	1/1:7,9:18:45.15:3199,45,0	0/0:14,0:14:26.92:0,27,869	0/0:9,0:9:18.94:0,19,784	1/1:21,0:31:66.68:4390,67,0	1/1:9,6:15:45.15:2978,45,0	1/1:5,0:5:15.03:784,15,0	1/1:36,0:36:87.29:5700,87,0	1/1:11,4:15:39.13:2656,39,0	1/1:6,6:13:30.09:2243,30,0	1/1:15,21:36:99:6912,99,0	1/1:9,6:16:39.13:2579,39,0	1/1:13,4:17:42.13:2988,42,0	1/1:10,11:22:57.19:3994,57,0	1/1:21,0:21:53.67:3156,54,0	1/1:17,7:25:66.22:4345,66,0	1/1:11,0:11:22.21:1202,22,0	1/1:5,3:9:20.24:1165,20,0	1/1:18,6:26:57.64:3326,58,0	1/1:21,13:38:81.25:5139,81,0	1/1:1,1:2:6.02:456,6,0	1/1:14,8:22:63.21:4041,63,0	1/1:10,7:20:18.59:2558,19,0	1/1:5,2:8:9.03:681,9,0	1/1:9,8:17:45.15:3325,45,0	1/1:13,14:30:87.24:5250,87,0	1/1:19,14:35:84.28:5465,84,0	1/1:4,4:8:24.08:1765,24,0
chr10	22166808	.	A	AAAAACAAACAAACAAAC	67617.52	PASS	AB=1.000;AC=51;AF=0.911;AN=56;BaseQRankSum=-0.927;DP=513;FS=10.879;HRun=0;HaplotypeScore=288.5609;InbreedingCoeff=0.6147;MQ=59.30;MQ0=0;MQRankSum=-8.435;QD=137.43;ReadPosRankSum=8.242;VQSLOD=3.5189;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:11:6.66:1105,7,0	1/1:17,0:17:23.43:2616,23,0	0/0:12,0:12:30.01:0,30,1020	0/0:9,0:9:18.94:0,19,847	1/1:33,0:33:24.94:3486,25,0	1/1:15,0:15:45.15:2440,45,0	0/1:6,0:6:7.80:599,0,8	1/1:34,0:34:63.50:4764,64,0	1/1:16,0:16:17.41:2154,17,0	1/1:12,0:12:4.32:1822,4,0	1/1:36,0:36:67.16:5647,67,0	1/1:14,0:14:39.13:2121,39,0	1/1:18,0:18:42.12:2490,42,0	1/1:22,0:22:57.19:3288,57,0	1/1:13,7:20:53.67:3756,54,0	1/1:26,0:26:18.55:3605,19,0	1/1:11,0:11:23.38:973,23,0	1/1:8,0:8:2.19:926,2,0	1/1:27,0:27:53.31:2707,53,0	1/1:31,0:31:29.59:4045,30,0	1/1:2,0:2:6.02:373,6,0	1/1:22,0:22:63.18:3274,63,0	1/1:19,0:19:17.70:2165,18,0	1/1:8,0:8:9.03:556,9,0	1/1:18,0:17:21.36:2697,21,0	1/1:27,0:27:57.35:4148,57,0	1/1:31,0:31:82.58:4428,83,0	1/1:8,0:8:24.08:1432,24,0
chr10	22166847	.	A	AT	291.05	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.096;DP=476;FS=0.000;HRun=8;HaplotypeScore=177.4620;InbreedingCoeff=0.8033;MQ=64.73;MQ0=0;MQRankSum=-0.693;QD=24.25;ReadPosRankSum=-1.426;VQSLOD=1.2423;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:30.01:0,30,274	0/0:14,0:14:27:0,27,247	0/0:9,0:9:14.22:0,14,115	0/0:7,0:8:4.69:0,5,94	0/0:31,0:31:66:0,66,604	0/0:26,0:26:72.03:0,72,659	0/0:8,0:8:18:0,18,165	0/0:21,0:21:57.02:0,57,522	0/0:15,0:15:42.02:0,42,383	0/0:12,0:12:33.02:0,33,302	0/0:29,0:29:65.96:0,66,592	0/0:17,0:17:39:0,39,357	0/0:19,0:19:54.02:0,54,494	0/0:23,0:23:57.02:0,57,522	1/1:0,12:12:36.02:386,36,0	0/0:14,0:14:30:0,30,274	0/0:9,0:9:21.01:0,21,192	0/0:14,0:14:39.01:0,39,356	0/0:17,0:17:42.02:0,42,384	0/0:33,0:33:87.03:0,87,795	0/0:6,0:6:15.01:0,15,137	0/0:23,0:23:54.01:0,54,494	0/0:16,0:16:36.01:0,36,329	0/0:5,0:5:9:0,9,82	0/0:18,0:17:42.01:0,42,384	0/0:30,0:30:84.04:0,84,768	0/0:25,0:25:60.02:0,60,545	0/0:10,0:10:27.01:0,27,247
chr10	22167124	.	T	TG	16488.20	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-12.535;DP=672;FS=0.302;HRun=2;HaplotypeScore=65.6570;InbreedingCoeff=0.9995;MQ=85.27;MQ0=0;MQRankSum=-2.909;QD=37.82;ReadPosRankSum=5.955;VQSLOD=4.9145;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,19:20:54.18:777,54,0	0/0:8,0:8:24.08:0,24,297	0/0:24,0:24:69.16:0,69,814	0/0:24,0:24:60.19:0,60,741	1/1:0,25:25:60.20:858,60,0	1/1:0,23:23:63.21:907,63,0	1/1:2,25:27:66.22:950,66,0	0/0:49,0:49:99:0,135,1662	0/0:20,0:20:60.19:0,60,744	1/1:0,32:32:96.30:1358,96,0	1/1:1,27:28:60.20:863,60,0	1/1:1,31:32:84.28:1209,84,0	1/1:1,24:25:66.22:950,66,0	1/1:2,19:21:60.20:855,60,0	1/1:1,26:27:75.25:1065,75,0	1/1:1,28:29:78.26:1123,78,0	0/0:24,0:24:72.21:0,72,877	0/0:10,0:10:30.09:0,30,372	0/0:23,0:23:63.20:0,63,781	0/0:31,0:31:93.29:0,93,1149	0/0:23,0:23:69.22:0,69,853	1/1:1,21:22:51.17:734,51,0	1/1:0,15:15:30.10:432,30,0	1/1:0,15:15:42.14:605,42,0	1/1:0,18:17:54.18:778,54,0	1/1:0,32:32:87.29:1253,87,0	1/1:2,31:33:87.29:1253,87,0	1/1:0,12:12:36.12:518,36,0
chr10	22168444	.	A	ACAAGAG	24389.99	PASS	AB=0.923;AC=37;AF=0.661;AN=56;BaseQRankSum=-10.844;DP=487;FS=65.501;HRun=0;HaplotypeScore=90.1698;InbreedingCoeff=0.9157;MQ=86.70;MQ0=0;MQRankSum=-16.788;QD=79.19;ReadPosRankSum=5.028;VQSLOD=2.6545;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,8:10:21.03:751,21,0	0/0:7,0:7:21.07:0,21,503	0/0:24,0:24:70.42:0,70,1489	0/0:25,0:25:65.44:0,65,1481	1/1:5,14:22:39.13:1346,39,0	1/1:3,24:27:66.23:2369,66,0	1/1:8,7:17:33.07:999,33,0	0/0:38,0:38:99:0,108,2502	0/0:15,0:15:42.12:0,42,891	1/1:3,19:24:72.25:2446,72,0	1/1:1,11:12:36.08:1203,36,0	1/1:1,13:15:39.13:1401,39,0	1/1:4,15:20:45.15:1566,45,0	1/1:5,15:21:48.16:1667,48,0	1/1:4,14:18:36.12:1238,36,0	1/1:1,10:11:33.07:1098,33,0	0/0:16,0:16:48.16:0,48,1149	0/0:13,0:13:35.85:0,36,758	0/0:23,0:23:66.23:0,66,1521	0/1:11,1:12:71.68:72,0,757	0/0:18,0:18:54.16:0,54,1190	1/1:3,8:11:27.09:916,27,0	1/1:3,8:11:21.07:754,21,0	1/1:3,8:12:27.09:960,27,0	1/1:3,11:18:36.12:1291,36,0	1/1:3,14:19:54.19:1833,54,0	1/1:3,18:23:54.19:1940,54,0	1/1:0,5:5:15.05:539,15,0
chr10	22169024	.	TTATATATATATATATA	T	4740.35	PASS	AB=0.568;AC=27;AF=0.587;AN=46;BaseQRankSum=3.001;DP=304;FS=22.772;HRun=0;HaplotypeScore=146.4752;InbreedingCoeff=0.6487;MQ=49.17;MQ0=4;MQRankSum=-4.569;QD=25.49;ReadPosRankSum=2.192;VQSLOD=2.1963;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:13:21.07:0,21,400	./.	./.	0/0:16,0:4:2.84:0,3,26	0/0:5,0:5:3.01:0,3,111	0/1:5,16:21:13.19:232,0,13	1/1:5,4:9:11.87:80,12,0	0/0:31,0:33:72.25:0,72,3264	0/0:2,0:2:3.01:0,3,231	1/1:10,12:22:36.11:1420,36,0	1/1:8,4:11:5:66,5,0	1/1:6,2:8:6.02:159,6,0	1/1:8,4:12:8.90:60,9,0	1/1:3,7:11:14.89:182,15,0	0/0:5,0:7:6.02:0,6,143	1/1:5,14:19:32.80:566,33,0	0/0:7,0:13:20.10:0,20,1097	0/0:5,0:9:12.04:0,12,787	0/0:8,0:9:12.04:0,12,626	./.	./.	1/1:2,1:3:3:26,3,0	1/1:4,5:8:2.96:20,3,0	./.	1/1:7,12:18:11.86:80,12,0	1/1:4,12:16:30.08:1043,30,0	1/1:8,10:16:12.04:538,12,0	1/1:1,6:7:6.02:269,6,0
chr10	22169039	.	T	TAT	559.25	PASS	AB=0.951;AC=13;AF=0.406;AN=32;BaseQRankSum=-4.689;DP=250;FS=0.000;HRun=0;HaplotypeScore=110.3962;InbreedingCoeff=0.4718;MQ=48.72;MQ0=6;MQRankSum=2.842;QD=4.70;ReadPosRankSum=-2.678;VQSLOD=2.4177;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:14,0:14:0.01:0,0,0	./.	0/1:10,0:6:0.02:0,0,0	0/1:21,0:4:0.17:0,0,0	./.	0/0:18,0:18:2.84:0,3,14	./.	0/1:24,4:29:16.50:282,0,17	0/0:1,0:1:3.01:0,3,34	0/0:14,0:14:28.88:0,29,140	0/1:8,0:8:0:0,0,0	./.	1/1:12,0:13:0.47:1,0,0	./.	./.	0/0:16,0:16:8.52:0,9,42	1/1:12,0:12:12.02:144,12,0	1/1:7,0:7:12.03:149,12,0	1/1:4,0:4:6.02:90,6,0	./.	./.	./.	./.	./.	./.	0/0:14,0:14:19.79:0,20,96	0/0:15,0:13:11.36:0,11,56	0/0:7,0:6:5.68:0,6,28
chr10	22169096	.	A	ATG	8576.33	PASS	AB=0.561;AC=22;AF=0.393;AN=56;BaseQRankSum=-10.670;DP=611;FS=0.840;HRun=0;HaplotypeScore=111.3501;InbreedingCoeff=0.8297;MQ=56.36;MQ0=7;MQRankSum=0.024;QD=31.88;ReadPosRankSum=3.169;VQSLOD=6.8385;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:54:0,54,642	0/0:4,0:4:9.03:0,9,111	0/0:32,0:6:14.97:0,15,153	0/0:38,0:14:15.15:0,15,131	0/0:10,0:10:30.09:0,30,369	1/1:10,6:16:12.04:196,12,0	1/1:1,15:17:21.07:342,21,0	0/0:44,0:44:87.18:0,87,1041	0/0:12,0:13:35.94:0,36,420	1/1:16,13:29:63.20:985,63,0	0/1:5,19:25:13.67:819,0,14	1/1:2,10:12:27.09:440,27,0	1/1:5,26:31:41.33:1182,41,0	1/1:4,21:25:63.20:989,63,0	0/0:22,0:22:60.19:0,60,739	1/1:11,22:31:63.21:1020,63,0	0/0:21,0:21:56.39:0,56,668	0/0:23,0:23:46.17:0,46,738	0/0:9,0:8:14.88:0,15,161	0/0:7,0:7:18.06:0,18,222	0/0:19,0:20:50.97:0,51,591	0/1:4,13:17:33.52:486,0,34	1/1:5,11:16:39.13:636,39,0	1/1:2,21:23:17.25:794,17,0	1/1:10,14:24:44.92:687,45,0	0/0:26,0:26:69.12:0,69,802	0/0:33,0:32:80.73:0,81,922	0/0:10,0:10:18.03:0,18,197
chr10	22170313	.	GTATATATATATATATATATATATATATATA	G	3095.11	PASS	AC=14;AF=0.875;AN=16;BaseQRankSum=2.143;DP=180;FS=0.000;HRun=0;HaplotypeScore=110.8929;MQ=31.89;MQ0=29;MQRankSum=1.508;QD=46.20;ReadPosRankSum=2.143;VQSLOD=1.9062;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	./.	1/1:3,4:6:9.03:667,9,0	./.	0/0:19,0:18:2.80:0,3,7	1/1:6,0:10:3.01:209,3,0	1/1:7,2:9:3.01:230,3,0	./.	1/1:3,3:6:2.74:229,3,0	./.	1/1:5,3:7:6.02:459,6,0	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	1/1:7,7:14:9.03:689,9,0	./.	1/1:9,4:13:9.03:689,9,0	./.
chr10	22172479	.	A	AAAAT	1475.63	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=7.693;DP=615;FS=1.556;HRun=0;HaplotypeScore=107.3389;InbreedingCoeff=0.6405;MQ=76.58;MQ0=1;MQRankSum=-4.639;QD=31.40;ReadPosRankSum=-2.297;VQSLOD=3.2661;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,108,2071	0/0:9,0:9:27.09:0,27,500	0/0:40,0:25:18.81:0,19,467	0/1:26,0:20:28.11:28,0,215	0/0:25,0:25:46.91:0,47,643	0/0:30,0:30:87.21:0,87,1565	0/0:13,0:13:39.13:0,39,733	0/0:29,0:29:84.17:0,84,1437	0/0:18,0:18:54.10:0,54,882	0/0:23,0:23:66.16:0,66,1084	0/0:33,0:33:99:0,99,1663	0/0:21,0:21:63.20:0,63,1175	0/0:18,0:18:50.63:0,51,846	0/0:19,0:19:57.17:0,57,1043	1/1:0,20:20:57.20:1554,57,0	0/0:21,0:21:63.19:0,63,1159	0/0:29,0:29:87.28:0,87,1604	0/0:12,0:12:33.08:0,33,595	0/0:18,0:18:54.19:0,54,1037	0/0:19,0:19:57.16:0,57,1012	0/0:11,0:11:30.10:0,30,576	0/0:17,0:17:51.06:0,51,871	0/0:17,0:17:48.14:0,48,883	0/0:23,0:23:69.24:0,69,1306	0/0:27,0:27:81.17:0,81,1365	0/0:26,0:26:78.24:0,78,1440	0/0:28,0:28:81.27:0,81,1523	0/0:6,0:6:18.06:0,18,314
chr10	22173327	.	GT	G	3644.93	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=13.589;DP=514;FS=5.956;HRun=8;HaplotypeScore=59.3687;InbreedingCoeff=0.9892;MQ=67.04;MQ0=0;MQRankSum=0.904;QD=25.14;ReadPosRankSum=0.155;VQSLOD=4.4102;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:72.22:0,72,862	1/1:1,10:11:27.04:261,27,0	0/0:8,0:9:26.86:0,27,267	0/0:7,0:7:9.01:0,9,108	0/0:37,0:37:99:0,105,1237	0/0:19,0:19:57.17:0,57,688	0/0:8,0:8:24.06:0,24,277	1/1:2,23:25:69.11:666,69,0	1/1:0,15:15:42.07:405,42,0	0/0:22,0:22:60.18:0,60,717	0/0:19,0:19:54.15:0,54,633	0/0:15,0:15:39.12:0,39,471	0/0:20,0:20:57.16:0,57,677	0/0:18,0:18:54.17:0,54,652	0/0:17,0:17:48.15:0,48,575	0/0:17,0:17:48.15:0,48,580	1/1:2,13:15:36.05:348,36,0	1/1:1,12:13:30.05:290,30,0	1/1:1,16:17:45.06:430,45,0	1/1:0,28:28:81.12:781,81,0	1/1:2,19:21:48.08:464,48,0	0/0:14,0:14:42.13:0,42,507	0/0:22,0:23:63.06:0,63,739	0/0:10,0:10:28.64:0,29,330	0/0:28,0:28:78.24:0,78,942	0/0:25,0:25:72.21:0,72,858	0/0:27,0:27:66.20:0,66,796	0/0:10,0:10:27.07:0,27,313
chr10	22173422	.	TA	T	1137	PASS	AB=0.853;AC=21;AF=0.375;AN=56;BaseQRankSum=6.631;DP=461;FS=2.089;HRun=14;HaplotypeScore=56.1987;InbreedingCoeff=0.3254;MQ=70.23;MQ0=0;MQRankSum=-0.821;QD=4.88;ReadPosRankSum=2.987;VQSLOD=1.6084;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:48.03:0,48,440	1/1:2,2:6:9.99:53,10,0	0/0:10,0:6:5.98:0,6,48	0/1:11,0:10:6.22:6,0,37	0/1:17,3:20:19.26:19,0,250	0/1:22,3:25:6.14:6,0,364	0/0:7,0:7:12.01:0,12,112	0/1:9,9:19:2.01:137,0,2	1/1:5,12:19:17.87:251,18,0	0/1:14,2:16:23.15:23,0,94	0/1:12,1:13:1.68:2,0,122	0/0:12,2:14:9.42:0,9,221	0/1:16,2:18:2.19:2,0,254	0/0:15,1:17:0.28:0,0,133	0/0:6,0:18:28.70:0,29,161	0/0:12,0:13:20.16:0,20,205	1/1:6,12:19:34.70:232,35,0	1/1:3,4:7:11.87:82,12,0	1/1:8,8:17:0.88:141,1,0	1/1:12,13:26:47.79:317,48,0	0/1:3,3:7:16.88:36,0,17	0/1:9,1:10:5.57:6,0,93	0/0:9,0:10:11.85:0,12,98	0/0:18,0:18:41.86:0,42,366	0/0:25,2:29:27.37:0,27,547	0/0:23,1:24:30.56:0,31,408	0/0:29,1:30:37.18:0,37,499	0/0:13,0:15:29.85:0,30,259
chr10	22173751	.	C	CT	4433.87	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-13.274;DP=600;FS=7.880;HRun=9;HaplotypeScore=59.1969;InbreedingCoeff=0.9862;MQ=74.85;MQ0=0;MQRankSum=-0.664;QD=24.77;ReadPosRankSum=-1.688;VQSLOD=4.9427;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,19:24:25.38:500,25,0	1/1:1,5:6:15.04:165,15,0	0/0:20,0:17:27.57:0,28,211	0/0:14,0:11:9.70:0,10,108	0/0:24,0:26:73.05:0,73,610	0/0:26,0:26:65.98:0,66,573	0/0:24,0:24:65.97:0,66,572	1/1:7,36:43:99:1111,102,0	1/1:1,13:15:36.10:398,36,0	0/0:27,0:27:56.97:0,57,493	0/0:22,0:22:62.97:0,63,543	0/0:16,0:16:28.92:0,29,368	0/0:18,0:18:44.97:0,45,386	0/0:24,0:24:59.95:0,60,514	0/0:21,0:21:56.98:0,57,495	0/0:25,1:26:35.80:0,36,540	1/1:2,12:14:36.10:398,36,0	1/1:4,20:24:34.14:600,34,0	1/1:8,8:16:24.06:265,24,0	1/1:4,26:31:78:831,78,0	1/1:0,6:6:15.04:166,15,0	0/0:21,0:21:59.99:0,60,521	0/0:25,0:25:65.93:0,66,561	0/0:15,0:15:41.98:0,42,364	0/0:28,0:28:74.81:0,75,639	0/0:27,0:28:68:0,68,575	0/0:27,0:27:74.98:0,75,651	0/0:13,0:13:32.99:0,33,286
chr10	22173932	.	G	GAA	18810.48	PASS	AB=1.000;AC=54;AF=0.964;AN=56;BaseQRankSum=-5.000;DP=575;FS=11.352;HRun=8;HaplotypeScore=79.3109;InbreedingCoeff=0.3905;MQ=83.16;MQ0=1;MQRankSum=-7.786;QD=32.71;ReadPosRankSum=3.627;VQSLOD=3.9076;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,12:15:33.11:524,33,0	1/1:0,8:8:24.08:381,24,0	0/1:20,0:18:1.77:2,0,383	0/1:26,0:23:7.86:8,0,238	1/1:8,17:28:68.03:884,68,0	1/1:3,23:27:71.73:1104,72,0	1/1:4,16:20:45.15:711,45,0	1/1:7,21:28:63.20:975,63,0	1/1:2,12:14:33.11:524,33,0	1/1:7,32:39:93.32:1473,93,0	1/1:2,10:12:30.06:440,30,0	1/1:4,15:21:45.15:695,45,0	1/1:5,14:18:39.13:614,39,0	1/1:0,12:12:36.12:571,36,0	1/1:6,0:23:41.33:265,41,0	1/1:4,28:32:81.28:1286,81,0	1/1:3,9:14:29.59:437,30,0	1/1:3,5:8:15.05:238,15,0	1/1:2,10:12:30.10:457,30,0	1/1:5,26:32:80.69:1193,81,0	1/1:1,17:20:53.67:818,54,0	1/1:2,15:17:39.09:583,39,0	1/1:2,25:27:69.23:1082,69,0	1/1:1,15:17:39.13:619,39,0	1/1:0,23:23:54.18:857,54,0	1/1:6,14:21:42.14:667,42,0	1/1:0,23:24:63:999,63,0	1/1:5,9:14:27.06:403,27,0
chr10	22173998	.	T	TA	793.71	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-1.775;DP=554;FS=0.802;HRun=1;HaplotypeScore=68.6634;InbreedingCoeff=0.9670;MQ=87.40;MQ0=1;MQRankSum=-2.453;QD=31.75;ReadPosRankSum=-0.701;VQSLOD=3.1225;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:5:12.04:0,12,156	0/0:8,0:8:24.08:0,24,312	0/0:28,0:28:84.27:0,84,1069	0/0:11,0:11:30.10:0,30,389	1/1:1,24:25:66.05:889,66,0	0/0:26,0:26:78.23:0,78,987	0/0:15,0:15:45.12:0,45,556	0/0:30,0:30:81.25:0,81,1024	0/0:15,0:15:36.12:0,36,467	0/0:32,0:32:93.30:0,93,1196	0/0:13,0:13:39.13:0,39,506	0/0:20,0:20:54.15:0,54,684	0/0:21,0:20:57.16:0,57,722	0/0:22,0:22:63.20:0,63,805	0/0:27,0:27:78.20:0,78,982	0/0:20,0:20:60.20:0,60,779	0/0:16,0:16:45.15:0,45,583	0/0:10,0:10:30.10:0,30,388	0/0:18,0:18:54.14:0,54,670	0/0:22,0:22:63.19:0,63,803	0/0:22,0:22:60.19:0,60,779	0/0:20,0:20:60.20:0,60,779	0/0:24,0:24:72.22:0,72,920	0/0:22,0:22:54.17:0,54,688	0/0:25,0:25:66.20:0,66,843	0/0:17,0:17:51.17:0,51,662	0/0:29,0:28:81.26:0,81,1048	0/0:11,0:11:33.11:0,33,428
chr10	22174509	.	AGAGG	A	1246.92	PASS	AB=0.990;AC=34;AF=0.708;AN=48;BaseQRankSum=-3.453;DP=307;FS=8.711;HRun=0;HaplotypeScore=73.2469;InbreedingCoeff=0.2046;MQ=34.09;MQ0=30;MQRankSum=0.482;QD=5.22;ReadPosRankSum=2.617;VQSLOD=0.7227;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:13:3.09:0,3,8	1/1:5,0:5:5.95:42,6,0	./.	0/1:10,0:3:0.01:0,0,0	./.	1/1:13,1:12:5.05:68,5,0	1/1:17,2:16:17.28:144,17,0	0/1:16,0:10:14.88:38,0,15	0/0:6,0:6:1.89:0,2,3	1/1:9,1:9:17.79:188,18,0	0/1:10,1:10:0:0,0,0	1/1:2,6:7:3.01:39,3,0	1/1:14,1:14:20.11:172,20,0	1/1:16,0:16:12.14:77,12,0	1/1:12,0:11:2.37:29,2,0	1/1:6,13:17:19.16:312,19,0	0/1:9,0:9:10.73:28,0,11	0/1:9,0:6:0.48:26,0,0	0/1:8,0:7:0.12:0,0,10	1/1:4,0:4:2.29:6,2,0	1/1:13,0:10:2.87:18,3,0	0/1:7,0:6:0.03:0,0,0	1/1:11,0:10:2.65:48,3,0	./.	0/0:8,0:8:3:0,3,29	0/1:11,0:8:13.14:35,0,13	1/1:9,1:8:10.13:95,10,0	./.
chr10	22174513	.	G	GGAGA	1630.86	PASS	AB=1.000;AC=38;AF=0.792;AN=48;BaseQRankSum=-2.708;DP=294;FS=14.583;HRun=0;HaplotypeScore=89.6960;InbreedingCoeff=0.2456;MQ=30.49;MQ0=32;MQRankSum=-0.321;QD=6.60;ReadPosRankSum=0.452;VQSLOD=0.9690;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:11:0.90:0,1,3	1/1:4,0:4:5.95:42,6,0	./.	./.	1/1:12,0:12:0.47:1,0,0	1/1:15,0:13:11.57:87,12,0	1/1:17,0:13:19.67:150,20,0	0/1:18,0:12:8.41:45,0,8	0/0:5,0:5:0.12:0,0,1	1/1:11,0:10:17.82:230,18,0	0/1:11,0:10:0.13:0,0,0	1/1:7,0:6:3.01:39,3,0	1/1:14,0:13:23.89:216,24,0	1/1:16,0:16:19.72:159,20,0	1/1:15,0:14:10.30:73,10,0	1/1:19,0:17:21.47:356,21,0	0/1:10,0:9:23.07:29,0,23	1/1:9,0:6:8.47:42,8,0	0/1:10,0:7:5.54:31,0,6	1/1:5,0:5:2.29:6,2,0	1/1:12,0:9:2.94:18,3,0	1/1:8,0:7:0.45:1,0,0	1/1:11,0:10:3:49,3,0	./.	0/0:9,0:9:2.93:0,3,27	1/1:11,0:6:10.65:69,11,0	1/1:10,0:8:11.18:97,11,0	./.
chr10	22175587	.	TGGAGAG	T	362	PASS	AB=1.000;AC=4;AF=0.071;AN=56;BaseQRankSum=5.662;DP=468;FS=0.000;HRun=0;HaplotypeScore=131.3465;InbreedingCoeff=0.4473;MQ=75.01;MQ0=12;MQRankSum=-2.455;QD=3.15;ReadPosRankSum=-3.024;VQSLOD=1.6995;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:34.50:0,34,845	0/0:6,0:6:9.50:0,10,302	0/0:58,0:25:42.30:0,42,670	0/1:90,0:32:26.14:26,0,204	0/0:16,0:15:38.95:0,39,1072	0/0:11,0:11:33.11:0,33,859	0/0:5,0:5:5.95:0,6,172	0/0:30,0:29:83.90:0,84,1921	0/0:6,0:6:18.02:0,18,487	0/0:11,0:11:30.06:0,30,716	0/0:10,0:10:21.07:0,21,511	0/1:12,0:11:3.01:3,0,685	0/0:16,0:15:22.74:0,23,875	0/0:7,0:7:20.96:0,21,436	1/1:2,9:10:23.75:440,24,0	0/0:6,0:5:14.98:0,15,327	0/0:16,0:16:48.12:0,48,1145	0/0:16,0:16:42.11:0,42,1151	0/0:16,0:14:40.95:0,41,1100	0/0:15,0:15:36.61:0,37,978	0/0:15,0:14:31.78:0,32,797	0/0:13,0:13:33.10:0,33,983	0/0:9,0:8:15.05:0,15,391	0/0:13,0:13:22.45:0,22,582	0/0:12,0:11:30.09:0,30,714	0/0:9,0:8:23.87:0,24,455	0/0:14,0:14:28.51:0,29,774	0/0:8,0:8:21.07:0,21,553
chr10	22175602	.	G	GGA	5789.01	PASS	AB=0.985;AC=32;AF=0.571;AN=56;BaseQRankSum=-4.359;DP=568;FS=0.505;HRun=0;HaplotypeScore=112.3827;InbreedingCoeff=0.7872;MQ=77.96;MQ0=16;MQRankSum=-0.341;QD=14.77;ReadPosRankSum=2.978;VQSLOD=4.7923;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:16:35.03:0,35,490	0/0:4,0:4:9.03:0,9,115	0/1:91,0:43:38.43:38,0,391	0/1:123,0:47:59.67:60,0,165	0/0:17,0:17:39.11:0,39,482	1/1:4,10:14:30.10:488,30,0	1/1:1,4:4:6.02:100,6,0	0/0:36,0:35:66.93:0,67,1002	0/0:5,0:5:15.05:0,15,191	1/1:2,11:11:27.09:451,27,0	1/1:4,7:11:15.05:251,15,0	1/1:4,10:13:24.42:545,24,0	1/1:4,13:16:36.12:598,36,0	1/1:1,7:8:21.07:338,21,0	0/0:13,0:12:29.85:0,30,319	1/1:2,5:6:0.97:221,1,0	0/0:17,0:17:42.10:0,42,517	0/0:16,0:16:45.14:0,45,568	0/0:14,0:14:34.82:0,35,403	0/0:23,0:23:33.11:0,33,420	0/0:15,0:14:18.06:0,18,229	1/1:1,13:14:33.11:535,33,0	1/1:3,7:8:12.04:201,12,0	1/1:3,13:16:23.94:400,24,0	1/1:3,9:11:27.09:452,27,0	1/1:3,8:10:24.07:365,24,0	1/1:3,9:13:27.09:444,27,0	1/1:1,8:8:18.06:301,18,0
chr10	22175629	.	AAGAGAGAGAGAGAGAGAGAG	A	884.48	PASS	AC=12;AF=0.240;AN=50;BaseQRankSum=1.795;DP=531;FS=0.000;HRun=0;HaplotypeScore=226.1223;InbreedingCoeff=0.7494;MQ=57.58;MQ0=26;MQRankSum=-0.051;QD=9.12;ReadPosRankSum=-2.055;VQSLOD=2.1230;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:11.76:0,12,189	1/1:3,0:4:3.01:58,3,0	0/0:72,0:24:8.29:0,8,92	0/0:88,0:26:6.88:0,7,22	0/0:16,0:17:18.06:0,18,636	0/0:14,0:15:12.04:0,12,580	./.	0/0:27,0:20:9.01:0,9,114	./.	0/0:13,0:11:21.07:0,21,760	0/0:11,0:10:12.04:0,12,400	0/0:13,0:13:12.04:0,12,373	0/0:22,0:21:33.04:0,33,1062	0/0:11,0:12:16.79:0,17,679	0/0:12,0:12:15.05:0,15,602	./.	1/1:18,0:16:6.02:181,6,0	1/1:15,0:15:8.79:186,9,0	1/1:9,6:15:25.99:460,26,0	1/1:15,12:25:14.86:103,15,0	1/1:17,0:15:4.10:52,4,0	0/0:15,0:14:5.64:0,6,73	0/0:7,0:6:3.01:0,3,53	0/0:16,0:17:11.10:0,11,371	0/0:17,0:16:27.05:0,27,577	0/0:14,0:13:21.05:0,21,544	0/0:14,0:14:18.06:0,18,466	0/0:10,0:8:21.07:0,21,719
chr10	22176806	.	TA	T	8176.94	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=16.505;DP=549;FS=4.773;HRun=9;HaplotypeScore=71.7134;InbreedingCoeff=0.9692;MQ=70.10;MQ0=0;MQRankSum=-1.310;QD=23.43;ReadPosRankSum=3.574;VQSLOD=5.8228;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,16:18:42.02:384,42,0	0/0:9,0:9:27.08:0,27,311	0/0:12,0:11:21.04:0,21,228	0/0:5,0:5:9.03:0,9,104	1/1:6,30:36:87.04:796,87,0	1/1:0,24:24:69.04:632,69,0	1/1:1,14:15:39.02:357,39,0	0/0:42,1:43:99:0,105,1206	0/0:14,0:14:36.09:0,36,406	1/1:3,20:23:60.02:545,60,0	1/1:1,19:20:54.02:494,54,0	1/1:2,12:14:36.01:330,36,0	1/1:1,27:28:69.04:631,69,0	1/1:2,12:14:30.02:275,30,0	1/1:0,29:29:81.04:741,81,0	1/1:1,18:19:45.02:412,45,0	0/0:30,0:30:87.26:0,87,1004	0/0:25,0:25:69.21:0,69,796	0/0:18,1:19:17.58:0,18,439	0/0:29,0:30:75.04:0,75,834	0/0:12,1:13:5.63:0,6,319	1/1:0,6:6:15.01:137,15,0	1/1:3,14:17:39.01:357,39,0	1/1:0,15:15:45.02:412,45,0	1/1:1,21:22:57.03:522,57,0	1/1:3,21:24:63.02:577,63,0	1/1:1,15:16:42.02:384,42,0	1/1:2,7:9:21:192,21,0
chr10	22177393	.	A	AT	604.70	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.814;DP=548;FS=4.468;HRun=3;HaplotypeScore=58.0298;InbreedingCoeff=0.9021;MQ=75.58;MQ0=0;MQRankSum=-1.875;QD=26.29;ReadPosRankSum=0.927;VQSLOD=2.7100;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:74.53:0,75,821	0/0:8,0:8:23.97:0,24,245	0/0:12,0:11:7.02:0,7,190	0/0:11,0:11:30.08:0,30,350	0/0:29,0:29:75.54:0,76,386	0/0:22,0:22:66.14:0,66,734	0/0:21,0:21:63.12:0,63,696	0/0:36,0:36:93.23:0,93,1065	0/0:20,0:20:54.15:0,54,637	0/0:18,0:18:54.16:0,54,640	0/0:15,0:15:42.12:0,42,494	0/0:11,0:11:33.10:0,33,395	0/0:31,0:31:90.20:0,90,1019	0/0:18,0:18:54.13:0,54,617	1/1:0,23:23:54.11:700,54,0	0/0:19,0:19:51.15:0,51,602	0/0:29,0:29:81.20:0,81,933	0/0:22,0:22:63.15:0,63,727	0/0:17,0:17:48.14:0,48,565	0/0:27,0:27:78.21:0,78,912	0/0:10,0:10:24.07:0,24,287	0/0:10,0:10:30.07:0,30,340	0/0:18,0:18:48.08:0,48,525	0/0:10,0:10:30.06:0,30,335	0/0:32,0:32:90.21:0,90,1026	0/0:23,0:23:66.16:0,66,747	0/0:26,0:26:75.18:0,75,847	0/0:5,0:5:15.03:0,15,166
chr10	22177404	.	A	AAT	1362.57	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=0.440;DP=535;FS=0.000;HRun=0;HaplotypeScore=66.7703;InbreedingCoeff=0.8537;MQ=80.23;MQ0=0;MQRankSum=-1.664;QD=21.63;ReadPosRankSum=1.724;VQSLOD=3.6420;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:66.20:0,66,930	0/0:6,0:6:18.04:0,18,227	0/1:16,0:16:1.22:1,0,393	0/0:12,0:12:27.08:0,27,379	1/1:0,26:26:72.11:1285,72,0	0/0:19,0:19:57.05:0,57,787	0/0:22,0:22:66.14:0,66,850	0/0:32,0:32:96.28:0,96,1316	0/0:20,0:20:60.17:0,60,822	0/0:18,0:18:54.18:0,54,771	0/0:14,0:14:42.13:0,42,596	0/0:12,0:12:33.11:0,33,480	0/0:32,0:32:96.25:0,96,1302	0/0:19,0:19:54.17:0,54,770	1/1:21,0:21:33.07:198,33,0	0/0:17,0:17:51.17:0,51,746	0/0:28,0:28:84.26:0,84,1182	0/0:24,0:24:68.37:0,68,908	0/0:19,0:19:54.16:0,54,755	0/0:28,0:28:84.25:0,84,1163	0/0:10,0:10:30.09:0,30,420	0/0:12,0:12:36.11:0,36,494	0/0:14,0:14:39.09:0,39,547	0/0:12,0:12:36.09:0,36,471	0/0:28,0:28:81.24:0,81,1132	0/0:20,0:20:54.18:0,54,773	0/0:27,0:27:78.20:0,78,1076	0/0:5,0:5:15.05:0,15,219
chr10	22178321	.	T	TA	1492.15	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=9.737;DP=543;FS=1.167;HRun=8;HaplotypeScore=58.3114;InbreedingCoeff=0.8081;MQ=72.38;MQ0=0;MQRankSum=-0.293;QD=24.87;ReadPosRankSum=2.512;VQSLOD=4.4998;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:51.03:0,51,467	0/0:6,0:6:15:0,15,137	0/0:14,0:14:8.58:0,9,122	0/1:8,0:8:3.13:3,0,50	1/1:3,30:33:90.23:1024,90,0	0/0:25,0:25:66:0,66,595	0/0:9,0:9:24.01:0,24,219	0/0:35,0:35:87.03:0,87,796	0/0:14,0:14:36.01:0,36,325	0/0:32,0:32:90.05:0,90,823	0/0:20,0:20:54.03:0,54,493	0/0:15,0:15:45.02:0,45,412	0/0:24,0:24:57.01:0,57,518	0/0:19,0:19:57.03:0,57,521	1/1:2,17:19:51.15:589,51,0	0/0:20,0:20:51.01:0,51,463	0/0:32,0:32:87:0,87,783	0/0:10,0:10:29.96:0,30,264	0/0:15,0:15:42:0,42,376	0/0:20,0:20:56.94:0,57,504	0/0:8,0:8:23.97:0,24,211	0/0:18,0:18:51.03:0,51,466	0/0:16,0:16:45.02:0,45,412	0/0:18,0:18:44.98:0,45,403	0/0:24,0:24:63:0,63,568	0/0:16,0:16:39.02:0,39,357	0/0:45,0:45:99:0,105,950	0/0:8,0:8:18:0,18,165
chr10	22179093	.	AAAAAG	A	1397.08	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.344;DP=687;FS=12.317;HRun=0;HaplotypeScore=131.3807;InbreedingCoeff=0.8813;MQ=76.67;MQ0=3;MQRankSum=-2.144;QD=41.09;ReadPosRankSum=1.589;VQSLOD=3.3199;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:45.15:0,45,1307	0/0:14,0:14:27.09:0,27,740	0/0:28,0:20:29.25:0,29,651	0/0:34,0:24:4.79:0,5,1164	0/0:11,0:31:60.17:0,60,1221	0/0:31,0:31:72.24:0,72,2028	0/0:25,0:25:63.22:0,63,1798	0/0:38,0:38:82.14:0,82,2262	0/0:22,0:22:60.21:0,60,1713	0/0:28,0:28:78.22:0,78,2085	0/0:29,0:29:75.24:0,75,2074	0/0:17,0:17:39.13:0,39,1117	0/0:29,0:29:75.26:0,75,2148	0/0:33,0:33:90.31:0,90,2529	1/1:5,29:34:78.27:1492,78,0	0/0:32,0:32:75.26:0,75,2141	0/0:25,0:25:66.23:0,66,1830	0/0:11,0:11:24.08:0,24,671	0/0:17,0:17:39.13:0,39,1120	0/0:23,0:23:60.21:0,60,1660	0/0:11,0:11:33.10:0,33,836	0/0:21,0:21:60.21:0,60,1672	0/0:15,0:15:36.12:0,36,996	0/0:25,0:25:63.22:0,63,1815	0/0:21,0:21:42.13:0,42,1153	0/0:21,0:21:57.20:0,57,1614	0/0:39,0:39:96.33:0,96,2743	0/0:18,0:18:51.18:0,51,1466
chr10	22179677	.	C	CA	20382.79	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=-5.440;DP=805;FS=1.169;HRun=1;HaplotypeScore=89.6046;InbreedingCoeff=0.9999;MQ=81.30;MQ0=0;MQRankSum=-3.397;QD=41.68;ReadPosRankSum=5.118;VQSLOD=4.7816;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,111,1436	0/0:12,0:12:36.12:0,36,467	0/0:24,0:24:69.22:0,69,889	0/0:29,0:29:72.09:0,72,894	0/0:20,0:20:54.16:0,54,687	1/1:0,28:28:78.26:1169,78,0	1/1:0,23:23:63.21:944,63,0	0/0:34,0:34:99:0,102,1288	0/0:29,0:29:84.26:0,84,1077	1/1:1,19:20:57.19:854,57,0	1/1:1,27:28:81.19:1164,81,0	1/1:1,35:36:99:1528,102,0	1/1:1,49:50:99:2113,141,0	1/1:1,34:35:93.32:1394,93,0	1/1:0,45:45:99:1976,132,0	1/1:0,26:26:72.24:1079,72,0	0/0:29,0:29:84.27:0,84,1089	0/0:11,0:11:33.11:0,33,425	0/0:24,0:24:69.22:0,69,886	0/0:37,0:37:99:0,108,1402	0/0:27,0:27:78.25:0,78,1012	1/1:1,32:33:87.29:1304,87,0	1/1:0,27:27:75.73:1125,76,0	1/1:0,36:36:96.33:1439,96,0	1/1:0,21:20:60.20:899,60,0	1/1:3,23:26:69.21:1011,69,0	1/1:1,35:36:99:1574,105,0	1/1:0,19:19:54.18:809,54,0
chr10	22180380	.	A	AT	10647.74	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=-14.489;DP=574;FS=9.968;HRun=6;HaplotypeScore=49.7839;InbreedingCoeff=0.9846;MQ=71.41;MQ0=0;MQRankSum=-0.883;QD=31.23;ReadPosRankSum=2.380;VQSLOD=4.9755;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:84.19:0,84,857	0/0:7,0:7:18.04:0,18,184	0/0:10,0:10:23.03:0,23,231	0/0:6,0:5:12.02:0,12,119	0/0:29,0:29:75.15:0,75,758	1/1:1,27:28:69.22:868,69,0	1/1:3,12:15:33:394,33,0	0/0:29,0:29:75.15:0,75,756	0/0:18,0:18:51.09:0,51,507	1/1:4,30:34:87.28:1093,87,0	1/1:2,19:21:57.10:676,57,0	1/1:3,22:25:59.70:754,60,0	1/1:5,25:30:78.20:960,78,0	1/1:4,25:29:72.23:898,72,0	1/1:1,28:29:69.22:868,69,0	1/1:3,21:24:32.59:724,33,0	0/0:27,0:27:75.16:0,75,765	0/0:13,0:12:36.05:0,36,357	0/0:23,0:23:66.13:0,66,665	0/0:24,0:24:57.07:0,57,561	0/0:17,0:17:42.08:0,42,423	1/1:0,8:8:24.03:284,24,0	1/1:1,15:16:42.13:528,42,0	1/1:1,15:16:36.12:453,36,0	1/1:0,7:7:18.06:226,18,0	1/1:3,17:20:54.17:675,54,0	1/1:1,31:32:90.28:1132,90,0	1/1:0,7:7:9.03:113,9,0
chr10	22180593	.	C	CA	565.15	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-4.453;DP=688;FS=0.000;HRun=7;HaplotypeScore=67.1907;InbreedingCoeff=0.9943;MQ=81.84;MQ0=0;MQRankSum=-2.231;QD=28.26;ReadPosRankSum=0.696;VQSLOD=4.1612;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:84.13:0,84,811	0/0:13,0:13:36.06:0,36,348	0/0:16,0:18:23.19:0,23,354	0/0:23,0:23:29.99:0,30,411	0/0:25,0:25:63.09:0,63,608	0/0:43,0:43:99:0,111,1072	0/0:19,0:19:42.05:0,42,400	0/0:25,0:25:69.09:0,69,658	0/0:28,0:28:84.14:0,84,811	0/0:30,0:30:84.13:0,84,811	0/0:24,0:23:57.06:0,57,544	0/0:30,0:30:87.14:0,87,840	0/0:34,0:34:99:0,99,955	0/0:30,0:30:81.12:0,81,782	1/1:1,19:20:31.21:660,31,0	0/0:25,0:25:69.11:0,69,666	0/0:18,0:18:51.08:0,51,493	0/0:9,0:9:27.04:0,27,261	0/0:32,0:32:84.07:0,84,797	0/0:29,0:29:75.11:0,75,723	0/0:10,0:10:27.02:0,27,255	0/0:17,0:17:45.07:0,45,435	0/0:19,0:19:54.09:0,54,521	0/0:24,0:24:63.10:0,63,608	0/0:23,0:23:66.11:0,66,637	0/0:32,0:32:75.11:0,75,724	0/0:44,0:44:99:0,123,1187	0/0:14,0:14:36.06:0,36,348
chr10	22182577	.	GA	G	5631.37	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-3.979;DP=666;FS=6.117;HRun=12;HaplotypeScore=152.8983;InbreedingCoeff=0.9696;MQ=70.62;MQ0=3;MQRankSum=-4.233;QD=16.04;ReadPosRankSum=6.103;VQSLOD=4.0703;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:42.08:0,42,217	0/0:10,0:10:24.22:0,24,109	0/0:50,0:32:33.56:0,34,314	0/0:34,0:16:17.15:0,17,142	0/0:28,0:28:55.44:0,55,414	1/1:6,18:24:40.58:421,41,0	1/1:8,10:18:14.99:238,15,0	0/0:29,0:32:67.14:0,67,394	0/0:22,0:22:38.97:0,39,186	1/1:11,12:23:20.81:316,21,0	1/1:7,13:21:25.60:297,26,0	1/1:8,21:29:55.96:409,56,0	1/1:10,14:24:43.85:307,44,0	1/1:9,15:25:64.51:462,65,0	0/0:19,0:19:46.94:0,47,271	1/1:10,22:32:84.10:639,84,0	0/0:22,0:22:35.95:0,36,169	0/0:18,0:18:20.19:0,20,95	0/0:17,0:19:40.27:0,40,192	0/0:24,0:24:55.19:0,55,262	0/0:10,0:10:5.58:0,6,27	1/1:7,21:28:65.42:483,65,0	1/1:4,18:22:50.15:361,50,0	1/1:6,15:22:51.99:378,52,0	1/1:6,9:15:29.75:219,30,0	1/1:16,22:38:83.26:622,83,0	1/1:9,16:25:41.55:421,42,0	1/1:2,3:5:8.22:55,8,0
chr10	22182589	.	AC	A	6864.23	PASS	AB=0.966;AC=53;AF=0.946;AN=56;BaseQRankSum=3.577;DP=719;FS=3.069;HRun=1;HaplotypeScore=158.8820;InbreedingCoeff=0.1069;MQ=67.04;MQ0=4;MQRankSum=-1.397;QD=9.55;ReadPosRankSum=6.033;VQSLOD=2.8559;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:28:44.08:287,44,0	1/1:13,0:13:23.61:153,24,0	0/1:50,2:30:39.30:39,0,140	0/1:34,1:15:4.01:4,0,153	0/1:26,1:27:18.41:109,0,18	1/1:25,0:25:59.70:274,60,0	1/1:14,0:14:32.28:151,32,0	1/1:32,0:32:29.42:407,29,0	1/1:27,0:27:39.02:280,39,0	1/1:28,0:28:38.35:153,38,0	1/1:27,0:27:62.68:334,63,0	1/1:29,0:29:71.42:372,71,0	1/1:25,0:25:48.30:275,48,0	1/1:29,0:29:64.41:353,64,0	1/1:21,0:21:52.79:271,53,0	1/1:38,0:38:83.30:399,83,0	1/1:23,0:23:36.66:265,37,0	1/1:20,0:20:14.79:164,15,0	1/1:21,0:20:43.06:327,43,0	1/1:27,0:27:62.15:429,62,0	1/1:9,0:9:8.32:53,8,0	1/1:26,0:26:65.82:344,66,0	1/1:26,0:26:36.29:281,36,0	1/1:28,0:28:48.10:245,48,0	1/1:17,0:17:33.34:161,33,0	1/1:36,0:36:71.22:388,71,0	1/1:30,0:30:60.83:287,61,0	1/1:6,0:6:12.02:61,12,0
chr10	22182590	.	CA	C	10914.94	PASS	AB=0.853;AC=50;AF=0.893;AN=56;BaseQRankSum=0.033;DP=722;FS=16.153;HRun=12;HaplotypeScore=145.6714;InbreedingCoeff=0.3650;MQ=67.23;MQ0=4;MQRankSum=-2.357;QD=16.32;ReadPosRankSum=6.048;VQSLOD=4.2270;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:25,3:28:25.07:294,25,0	1/1:13,0:13:25.39:214,25,0	0/0:53,0:31:23.53:0,24,250	0/1:34,1:15:0.41:0,0,141	1/1:5,22:27:62.76:534,63,0	1/1:0,25:25:66.03:596,66,0	1/1:4,10:14:29.99:265,30,0	0/1:31,1:32:31.05:365,0,31	1/1:25,3:28:41.78:339,42,0	1/1:5,23:28:69.01:619,69,0	1/1:1,26:27:71.77:612,72,0	1/1:0,29:29:80.60:698,81,0	1/1:5,18:25:41.80:359,42,0	1/1:2,26:29:68.92:598,69,0	1/1:17,4:21:30.61:328,31,0	1/1:9,29:38:84.19:741,84,0	1/1:21,2:23:16.42:232,16,0	0/1:18,2:20:13.62:118,0,14	1/1:20,2:21:5.42:222,5,0	1/1:27,1:28:59.31:506,59,0	0/1:2,7:9:16.22:18,0,16	1/1:5,21:26:65.93:575,66,0	1/1:3,22:26:47.84:419,48,0	1/1:4,24:28:48.15:415,48,0	1/1:1,16:17:38.73:330,39,0	1/1:5,30:35:89.88:788,90,0	1/1:3,27:30:69.03:620,69,0	1/1:2,4:6:12.01:109,12,0
chr10	22184683	.	CA	C	8969.60	PASS	AB=1.000;AC=31;AF=0.554;AN=56;BaseQRankSum=0.067;DP=612;FS=2.242;HRun=7;HaplotypeScore=101.8524;InbreedingCoeff=0.9428;MQ=74.01;MQ0=0;MQRankSum=-0.897;QD=25.85;ReadPosRankSum=1.027;VQSLOD=4.8836;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:2,0:19:45.45:0,45,232	0/0:18,0:18:54.17:0,54,676	0/0:12,0:12:9.65:0,10,114	0/1:10,0:10:3.54:4,0,34	0/0:27,0:27:75.24:0,75,934	1/1:5,24:29:66.14:673,66,0	1/1:2,15:17:42.09:429,42,0	0/0:38,0:38:99:0,99,1224	0/0:16,0:16:42.13:0,42,528	1/1:2,34:36:99:1040,102,0	1/1:2,17:19:48.11:490,48,0	1/1:0,17:17:45:459,45,0	1/1:0,26:26:72.16:734,72,0	1/1:2,18:20:51.11:520,51,0	0/0:3,0:23:45.45:0,45,232	1/1:1,21:21:57.13:582,57,0	0/0:25,0:25:72.19:0,72,888	0/0:24,0:24:63.19:0,63,778	0/0:17,0:17:48.15:0,48,594	0/0:30,0:30:84.27:0,84,1056	0/0:16,0:16:36.12:0,36,453	1/1:1,25:26:72.16:734,72,0	1/1:3,18:21:51.11:520,51,0	1/1:1,13:14:36.08:367,36,0	1/1:3,20:23:54.12:551,54,0	1/1:1,27:28:81.18:826,81,0	1/1:1,26:27:71.69:734,72,0	1/1:1,11:12:30.06:306,30,0
chr10	22185529	.	CT	C	6349.73	PASS	AB=0.545;AC=33;AF=0.589;AN=56;BaseQRankSum=12.008;DP=620;FS=0.000;HRun=11;HaplotypeScore=69.5166;InbreedingCoeff=0.9106;MQ=67.95;MQ0=7;MQRankSum=2.194;QD=17.35;ReadPosRankSum=6.069;VQSLOD=5.2704;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,19:21:56.89:464,57,0	0/0:14,0:14:39.09:0,39,410	0/0:23,0:10:17.68:0,18,115	0/0:33,1:19:2.01:0,2,87	0/0:35,1:36:61.93:0,62,830	1/1:0,23:23:50.94:419,51,0	1/1:2,7:8:20.97:172,21,0	0/0:33,1:35:62.40:0,62,845	0/0:19,0:19:26.73:0,27,460	1/1:3,21:25:54.23:497,54,0	1/1:2,18:21:43.77:334,44,0	1/1:4,18:23:40.98:326,41,0	1/1:2,27:29:65.92:542,66,0	1/1:1,15:16:41.95:345,42,0	1/1:4,29:33:77.84:637,78,0	1/1:1,19:20:15.96:338,16,0	0/0:23,1:23:32.44:0,32,528	0/0:13,0:13:36.07:0,36,374	0/0:19,0:18:14.54:0,15,343	0/0:28,1:29:81.16:0,81,829	0/0:8,0:8:18.05:0,18,192	0/1:2,10:12:1.75:192,0,2	1/1:5,27:34:9.64:466,10,0	1/1:3,13:16:35.95:296,36,0	1/1:2,12:14:32.96:271,33,0	1/1:9,16:25:18.91:357,19,0	1/1:1,22:24:55.97:450,56,0	1/1:3,18:21:29.94:246,30,0
chr10	22186414	.	G	GA	1827.26	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=0.180;DP=756;FS=2.873;HRun=11;HaplotypeScore=96.2330;InbreedingCoeff=0.8598;MQ=76.47;MQ0=5;MQRankSum=-0.786;QD=13.74;ReadPosRankSum=-0.374;VQSLOD=3.7671;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,1:35:61.18:317,61,0	0/0:5,0:5:11.95:0,12,93	0/0:60,0:39:34.31:0,34,295	0/0:53,0:34:5.84:0,6,177	0/0:23,0:23:47.30:0,47,449	0/0:13,0:13:32.86:0,33,255	0/0:19,0:20:49.81:0,50,370	0/0:38,2:42:1.85:0,2,542	0/0:24,0:25:58.81:0,59,447	0/0:22,0:23:58.79:0,59,446	0/0:21,2:23:32.29:0,32,434	0/0:40,0:42:78.51:0,79,805	0/0:31,2:33:41.12:0,41,503	0/0:21,1:23:31.37:0,31,416	1/1:4,1:31:53.84:272,54,0	0/0:35,0:36:70.24:0,70,656	0/0:35,1:38:66.27:0,66,678	0/0:20,0:23:53.90:0,54,389	0/0:18,0:18:5.29:0,5,215	0/0:25,0:25:56.77:0,57,441	0/0:14,0:14:32.86:0,33,255	0/0:14,1:15:2.42:0,2,202	0/0:20,0:20:23.19:0,23,364	0/0:23,0:24:64.77:0,65,490	0/0:21,0:21:45.96:0,46,384	1/1:4,16:20:35.13:444,35,0	1/1:9,17:25:49.65:491,50,0	1/1:1,18:19:48.03:474,48,0
chr10	22186635	.	GA	G	1150.62	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=4.396;DP=599;FS=0.568;HRun=8;HaplotypeScore=78.3367;InbreedingCoeff=0.9748;MQ=81.47;MQ0=4;MQRankSum=-0.962;QD=21.31;ReadPosRankSum=1.677;VQSLOD=3.9733;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,28:33:78.12:751,78,0	0/0:6,0:6:15.05:0,15,181	0/0:48,1:31:13.96:0,14,480	0/0:41,0:29:39.53:0,40,389	0/0:15,0:15:39.11:0,39,458	0/0:13,0:13:39.12:0,39,469	0/0:32,0:32:96.29:0,96,1154	0/0:24,0:24:66.18:0,66,773	0/0:12,0:12:36.11:0,36,433	0/0:25,0:25:63.17:0,63,730	0/0:19,0:19:48.14:0,48,571	0/0:24,0:24:60.18:0,60,721	0/0:16,1:17:16.18:0,16,467	0/0:23,0:23:66.19:0,66,784	1/1:2,19:21:54.08:521,54,0	0/0:15,0:15:39.12:0,39,469	0/0:31,0:31:93.29:0,93,1118	0/0:19,0:19:39.09:0,39,455	0/0:26,0:27:72.03:0,72,818	0/0:11,0:11:30.09:0,30,361	0/0:14,0:14:39.12:0,39,469	0/0:17,0:17:48.14:0,48,562	0/0:11,0:11:30.07:0,30,342	0/0:24,0:24:66.13:0,66,755	0/0:20,0:20:57.17:0,57,681	0/0:24,0:24:66.20:0,66,794	0/0:15,0:15:42.13:0,42,505	0/0:17,0:17:45.14:0,45,541
chr10	22187008	.	CGA	C	2289.80	PASS	AC=16;AF=0.296;AN=54;BaseQRankSum=7.339;DP=474;FS=0.471;HRun=0;HaplotypeScore=68.6273;InbreedingCoeff=0.8665;MQ=67.85;MQ0=1;MQRankSum=-1.010;QD=15.79;ReadPosRankSum=-4.223;VQSLOD=2.0830;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:96.26:0,96,1758	./.	0/0:8,0:6:1.95:0,2,6	0/0:12,0:10:4.78:0,5,28	1/1:2,3:5:3.85:22,4,0	0/0:3,0:3:9.03:0,9,173	0/0:52,0:52:99:0,150,2694	1/1:8,5:12:26.89:264,27,0	1/1:1,2:3:6.01:70,6,0	0/0:18,0:18:51.15:0,51,850	0/0:6,0:6:18.06:0,18,341	0/0:13,0:13:36.12:0,36,672	0/0:15,0:15:31.37:0,31,764	0/0:16,0:16:48.14:0,48,847	0/0:7,0:7:21.05:0,21,341	0/0:8,0:8:24.03:0,24,332	1/1:9,14:20:23.76:311,24,0	1/1:19,7:25:47.75:531,48,0	1/1:6,8:13:33.03:424,33,0	1/1:1,4:5:5.94:91,6,0	1/1:33,22:52:68.81:766,69,0	0/0:11,0:11:30.10:0,30,557	0/0:10,0:10:13.32:0,13,449	0/0:63,0:63:99:0,164,3107	0/0:16,0:16:48.12:0,48,793	0/0:21,0:21:52.25:0,52,1076	0/0:5,0:5:15.03:0,15,254	0/0:6,0:6:17.06:0,17,229
chr10	22187010	.	AGC	A	857.49	PASS	AB=0.909;AC=17;AF=0.315;AN=54;BaseQRankSum=10.239;DP=483;FS=0.584;HRun=0;HaplotypeScore=75.2918;InbreedingCoeff=0.7421;MQ=67.48;MQ0=2;MQRankSum=-3.829;QD=5.53;ReadPosRankSum=-1.200;VQSLOD=2.7251;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:96.10:0,96,1531	./.	0/0:10,0:6:2.89:0,3,16	0/0:15,0:10:7.47:0,7,26	1/1:5,0:5:0.87:2,1,0	0/0:4,0:4:12.04:0,12,199	0/0:52,0:52:99:0,144,2320	1/1:11,0:10:11.29:88,11,0	1/1:4,0:4:3.48:32,3,0	0/0:21,0:21:50.93:0,51,773	0/0:6,0:6:18.06:0,18,301	0/0:12,0:12:36.12:0,36,604	0/0:15,0:15:3.55:0,4,618	0/0:16,0:16:45.15:0,45,752	0/0:7,0:7:15.05:0,15,253	0/0:8,0:8:21.07:0,21,345	1/1:23,0:20:17.83:162,18,0	1/1:27,0:26:27.22:217,27,0	1/1:14,0:13:26.75:231,27,0	1/1:5,0:5:5.89:47,6,0	1/1:55,0:52:13.83:247,14,0	0/0:11,0:11:33.11:0,33,542	0/1:9,1:10:11.50:12,0,377	0/0:61,3:64:99:0,133,2655	0/0:16,0:16:42.14:0,42,686	0/0:20,1:21:24.60:0,25,965	0/0:6,0:6:15.02:0,15,223	0/0:6,0:6:9.03:0,9,152
chr10	22187032	.	CAG	C	2605.04	PASS	AC=16;AF=0.296;AN=54;BaseQRankSum=11.480;DP=548;FS=4.526;HRun=0;HaplotypeScore=73.7349;InbreedingCoeff=0.9065;MQ=56.81;MQ0=6;MQRankSum=-6.031;QD=16.28;ReadPosRankSum=-2.800;VQSLOD=2.7582;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:96.24:0,96,1671	./.	0/0:25,0:8:8:0,8,252	0/0:17,0:9:17.96:0,18,269	1/1:0,5:5:3.90:48,4,0	0/0:8,0:8:24.07:0,24,420	0/0:56,0:56:99:0,162,2758	1/1:3,14:16:39.01:510,39,0	1/1:0,6:6:9.03:137,9,0	0/0:21,0:21:63.20:0,63,1118	0/0:9,0:9:24.08:0,24,460	0/0:21,0:21:57.13:0,57,934	0/0:17,0:17:48.12:0,48,824	0/0:19,0:19:54.14:0,54,924	0/0:7,0:7:21.05:0,21,363	0/0:8,0:8:24.08:0,24,463	1/1:2,23:25:26.93:374,27,0	1/1:2,23:25:32.90:445,33,0	1/1:2,13:14:39.09:545,39,0	1/1:0,4:4:2.93:46,3,0	1/1:10,53:62:53.96:692,54,0	0/0:10,0:10:27.09:0,27,521	0/0:11,0:11:27.09:0,27,518	0/0:69,0:69:99:0,195,3298	0/0:17,0:17:51.12:0,51,912	0/0:25,0:25:75.24:0,75,1372	0/0:5,0:5:12.03:0,12,188	0/0:4,0:4:12.02:0,12,173
chr10	22188491	.	G	GTTT	5131.89	PASS	AB=0.590;AC=33;AF=0.589;AN=56;BaseQRankSum=3.538;DP=672;FS=21.814;HRun=12;HaplotypeScore=123.3683;InbreedingCoeff=0.4698;MQ=79.69;MQ0=0;MQRankSum=-3.707;QD=11.23;ReadPosRankSum=-2.540;VQSLOD=0.5227;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:35:58.67:0,59,353	1/1:3,2:11:10.22:135,10,0	0/0:22,0:24:16.19:0,16,339	0/0:24,0:25:3.45:0,3,200	0/0:28,0:32:68.79:0,69,753	1/1:6,2:21:2.29:282,2,0	1/1:4,0:16:26.90:206,27,0	1/1:26,15:43:62.16:872,62,0	1/1:5,9:18:27.05:396,27,0	0/0:16,0:18:11.03:0,11,335	0/0:13,0:15:25.42:0,25,300	1/1:5,0:28:24.20:99,24,0	0/1:9,0:28:52.11:52,0,71	0/1:8,0:24:48.23:48,0,74	0/0:33,0:35:50.72:0,51,627	0/0:28,0:30:72.07:0,72,807	1/1:5,14:26:42.05:599,42,0	1/1:10,12:26:42.12:685,42,0	1/1:11,8:22:36.07:517,36,0	1/1:9,13:25:48.75:660,49,0	1/1:4,4:16:16.19:164,16,0	1/1:2,0:14:13.42:59,13,0	0/1:4,0:17:10.72:11,0,20	0/1:4,0:18:12.87:13,0,18	0/1:6,0:26:52.93:56,0,53	1/1:6,0:26:26.60:117,27,0	0/1:11,0:24:3.34:82,0,3	0/1:8,0:26:3:78,0,3
chr10	22188907	.	ACAACCACCTCACGC	A	16426.77	PASS	AB=0.725;AC=45;AF=0.804;AN=56;BaseQRankSum=9.905;DP=572;FS=3.181;HRun=0;HaplotypeScore=231.2007;InbreedingCoeff=0.7692;MQ=66.40;MQ0=0;MQRankSum=-9.521;QD=36.50;ReadPosRankSum=5.360;VQSLOD=3.9180;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:88.49:0,88,4852	1/1:4,4:8:8.89:354,9,0	0/0:19,0:20:24.08:0,24,559	0/0:23,0:21:21.07:0,21,738	0/0:20,0:20:42.99:0,43,1645	1/1:5,8:13:12.04:458,12,0	1/1:16,15:31:30.10:1155,30,0	1/1:17,0:17:1.25:69,1,0	1/1:8,11:19:27.09:1049,27,0	1/1:6,4:10:12.04:375,12,0	1/1:10,7:17:3.01:118,3,0	1/1:8,10:18:29.37:1151,29,0	1/1:11,14:25:42.14:1635,42,0	1/1:12,17:29:39.13:1500,39,0	0/0:20,0:20:39.13:0,39,2476	1/1:8,14:22:24.08:925,24,0	1/1:16,17:33:24.08:943,24,0	1/1:10,8:18:18.06:695,18,0	1/1:13,4:17:11.99:212,12,0	1/1:5,11:16:24.08:826,24,0	0/1:18,11:29:0.48:109,0,0	1/1:8,11:19:15.05:560,15,0	1/1:5,14:19:11.44:466,11,0	1/1:17,9:26:14.59:574,15,0	1/1:9,14:23:30.10:1071,30,0	1/1:4,13:17:39.13:1357,39,0	1/1:8,10:18:18.53:708,19,0	1/1:5,1:6:1.25:115,1,0
chr10	22189253	.	T	TA	8269.31	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-14.231;DP=755;FS=0.970;HRun=2;HaplotypeScore=69.9834;InbreedingCoeff=0.9973;MQ=89.31;MQ0=0;MQRankSum=-2.434;QD=36.59;ReadPosRankSum=2.130;VQSLOD=5.5368;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,39:46:99:1641,114,0	0/0:11,0:11:30.09:0,30,371	0/0:25,0:25:72.10:0,72,822	0/0:32,0:32:89.82:0,90,1025	0/0:24,0:24:66.21:0,66,818	0/0:19,0:19:54.16:0,54,657	0/0:42,0:42:99:0,108,1301	0/0:25,0:25:75.22:0,75,909	0/0:20,0:20:60.16:0,60,719	1/1:4,20:24:63.21:899,63,0	1/1:0,21:22:66.17:909,66,0	0/0:34,0:34:99:0,102,1224	0/0:35,0:35:99:0,99,1214	0/0:35,0:35:99:0,105,1264	1/1:2,33:35:87.29:1253,87,0	1/1:2,35:37:93.31:1339,93,0	0/0:31,0:31:87.27:0,87,1077	0/0:17,0:17:51.12:0,51,615	0/0:22,0:22:60.18:0,60,734	0/0:28,0:28:84.24:0,84,1016	0/0:33,0:33:90.26:0,90,1100	0/0:21,0:21:54.16:0,54,656	0/0:16,0:16:48.15:0,48,594	0/0:32,0:32:93.29:0,93,1152	0/0:27,0:27:81.24:0,81,992	1/1:0,26:27:81.23:1104,81,0	1/1:5,23:27:63.21:907,63,0	1/1:2,5:7:15.05:216,15,0
chr10	22189438	.	A	AC	23213.12	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-10.003;DP=732;FS=4.237;HRun=5;HaplotypeScore=61.3615;InbreedingCoeff=0.9997;MQ=92.13;MQ0=0;MQRankSum=-11.746;QD=34.59;ReadPosRankSum=7.200;VQSLOD=4.0307;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,48:55:99:1804,138,0	1/1:2,12:14:33.11:434,33,0	0/0:33,0:33:78.14:0,78,819	0/0:28,0:28:72.59:0,73,751	1/1:2,24:26:69.22:908,69,0	1/1:0,17:17:51.17:670,51,0	1/1:0,20:20:54.18:711,54,0	1/1:4,26:30:78.19:978,78,0	1/1:1,26:27:69.22:908,69,0	1/1:1,18:19:54.14:678,54,0	1/1:2,14:16:42.14:553,42,0	1/1:3,16:19:48.16:632,48,0	1/1:1,29:32:84.14:1102,84,0	1/1:1,33:34:93.30:1223,93,0	1/1:1,26:27:72.23:947,72,0	1/1:1,24:25:72.23:947,72,0	1/1:0,25:25:75.24:987,75,0	1/1:1,22:23:63.20:829,63,0	1/1:3,24:27:75.24:985,75,0	1/1:0,26:26:72.23:947,72,0	1/1:5,34:39:90.29:1184,90,0	1/1:2,19:21:60.19:787,60,0	1/1:0,15:15:42.14:552,42,0	1/1:2,26:28:69.17:887,69,0	1/1:6,29:35:81.26:1066,81,0	1/1:0,26:26:78.23:997,78,0	1/1:4,30:34:81.26:1065,81,0	1/1:0,11:11:33.11:434,33,0
chr10	22190273	.	G	GA	3550.16	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-3.871;DP=518;FS=15.097;HRun=9;HaplotypeScore=61.9073;InbreedingCoeff=0.9780;MQ=62.21;MQ0=4;MQRankSum=-0.465;QD=25.18;ReadPosRankSum=-3.101;VQSLOD=1.9558;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:80.98:0,81,703	1/1:2,8:10:14.95:166,15,0	0/0:9,0:8:8.88:0,9,121	0/0:6,0:5:11.84:0,12,92	0/0:29,0:30:68:0,68,579	0/0:24,0:25:64.99:0,65,547	0/0:17,0:17:47.99:0,48,416	1/1:6,22:28:43.12:699,43,0	1/1:2,12:16:36.10:397,36,0	0/0:23,0:22:50.98:0,51,443	0/0:17,0:17:41.99:0,42,364	0/0:18,0:18:44.99:0,45,391	0/0:19,0:19:50.99:0,51,443	0/0:17,0:17:41.97:0,42,364	0/0:20,0:20:56.99:0,57,494	0/0:22,0:22:53.98:0,54,469	1/1:6,26:33:78.04:844,78,0	1/1:0,9:9:21.06:232,21,0	1/1:1,20:21:51.14:564,51,0	1/1:3,15:18:45.08:483,45,0	1/1:0,6:6:15.04:166,15,0	0/0:14,0:15:35.99:0,36,313	0/0:12,0:12:26.98:0,27,235	0/0:21,0:21:59.99:0,60,521	0/0:22,0:22:56.98:0,57,495	0/0:21,0:21:44.98:0,45,391	0/0:25,0:24:65.95:0,66,566	0/0:8,0:8:24:0,24,208
chr10	22190497	.	TTTA	T	1937.68	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=-5.780;DP=494;FS=10.614;HRun=0;HaplotypeScore=113.7871;InbreedingCoeff=0.4377;MQ=67.86;MQ0=3;MQRankSum=-0.391;QD=9.64;ReadPosRankSum=2.527;VQSLOD=2.7251;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,19:21:45.14:699,45,0	1/1:5,0:5:14.36:79,14,0	0/0:11,0:10:26.99:0,27,340	0/0:14,0:10:25.63:0,26,206	0/0:21,0:21:54.10:0,54,918	0/0:31,0:31:74.58:0,75,1121	0/0:9,0:7:19.29:0,19,225	0/1:45,0:45:99:391,0,104	0/1:14,0:14:26.48:78,0,26	0/0:23,0:23:52.87:0,53,256	0/0:23,0:23:43.29:0,43,216	0/0:10,0:10:30.04:0,30,356	0/0:9,0:9:17.36:0,17,166	0/0:13,0:13:17.71:0,18,301	1/1:24,0:24:2.67:31,3,0	0/0:16,0:15:33.35:0,33,108	1/1:15,0:15:13.62:165,14,0	0/1:24,0:24:72.64:181,0,73	0/1:21,0:21:36.53:200,0,37	1/1:24,0:24:9.24:261,9,0	0/1:8,0:7:28.84:29,0,31	0/0:6,0:5:0.18:0,0,84	0/0:8,0:8:15.04:0,15,186	0/0:4,0:4:9.02:0,9,124	0/0:18,0:18:43.70:0,44,550	0/0:24,0:23:49.68:0,50,259	0/0:35,0:34:77.83:0,78,352	0/0:18,0:18:32.84:0,33,121
chr10	22190499	.	TA	T	795.65	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-3.752;DP=487;FS=7.615;HRun=1;HaplotypeScore=101.3450;InbreedingCoeff=0.8013;MQ=69.08;MQ0=3;MQRankSum=-0.224;QD=17.68;ReadPosRankSum=-0.172;VQSLOD=3.3198;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:21:42.91:314,43,0	0/0:5,0:5:13.36:0,13,60	0/0:11,1:11:28.76:0,29,262	0/0:11,3:10:7.14:0,7,155	0/0:20,0:20:48.57:0,49,563	0/0:30,0:30:74.50:0,74,728	0/0:9,0:7:20.04:0,20,166	0/0:43,0:43:99:0,117,633	0/0:14,0:14:21.21:0,21,114	0/0:21,0:21:61.75:0,62,397	0/0:25,0:25:49.22:0,49,291	0/0:10,0:10:29.98:0,30,261	0/0:9,0:9:20.90:0,21,138	0/0:12,0:12:17.80:0,18,218	1/1:3,21:24:48.06:602,48,0	0/0:16,0:15:41.88:0,42,191	0/0:14,0:14:35.20:0,35,168	0/0:26,0:26:53.18:0,53,274	0/0:20,0:20:46.21:0,46,232	0/0:23,0:23:51.30:0,51,236	0/0:8,0:7:14.37:0,14,85	0/0:7,0:6:0.74:0,1,54	0/0:8,0:8:14.98:0,15,124	0/0:3,0:3:9.01:0,9,84	0/0:18,0:18:47.54:0,48,381	0/0:25,0:24:46.79:0,47,337	0/0:35,0:34:85.90:0,86,433	0/0:15,0:15:38.27:0,38,176
chr10	22190500	.	ATT	A	5044.77	PASS	AB=0.807;AC=36;AF=0.643;AN=56;BaseQRankSum=-9.423;DP=485;FS=10.510;HRun=11;HaplotypeScore=94.7548;InbreedingCoeff=0.5417;MQ=70.02;MQ0=3;MQRankSum=-1.564;QD=13.04;ReadPosRankSum=-0.078;VQSLOD=2.4696;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:21:26.25:112,26,0	1/1:0,0:5:13.47:57,13,0	0/0:13,0:12:29.68:0,30,354	0/0:14,0:10:9.04:0,9,144	0/0:18,0:20:53.58:0,54,704	0/0:28,2:30:27.07:0,27,514	0/1:7,2:7:14.46:14,0,78	1/1:8,0:42:91.95:385,92,0	1/1:2,0:14:16.46:72,16,0	1/1:4,17:21:51.09:533,51,0	1/1:1,22:24:50.98:596,51,0	0/0:10,0:10:17.94:0,18,140	0/1:5,4:9:47.51:100,0,48	0/1:9,2:11:8.91:9,0,116	0/1:24,0:24:1.65:2,0,203	1/1:2,14:15:42.10:447,42,0	1/1:1,0:14:32.93:144,33,0	1/1:6,0:26:34.90:152,35,0	1/1:4,0:20:37.90:162,38,0	1/1:2,0:23:41.91:203,42,0	1/1:3,0:7:8.23:36,8,0	0/1:3,3:6:30.95:72,0,31	0/0:5,0:8:11.71:0,12,80	0/0:3,0:3:8.97:0,9,68	0/1:13,5:18:76:76,0,237	1/1:6,19:24:54.07:564,54,0	1/1:5,30:34:84.17:893,84,0	1/1:1,14:15:39.10:415,39,0
chr10	22190503	.	T	TA	2323.37	PASS	AB=0.916;AC=21;AF=0.375;AN=56;BaseQRankSum=-2.550;DP=474;FS=3.629;HRun=0;HaplotypeScore=94.6693;InbreedingCoeff=0.5671;MQ=71.27;MQ0=3;MQRankSum=-0.244;QD=11.98;ReadPosRankSum=-1.345;VQSLOD=4.1375;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:34.05:0,34,337	0/1:5,0:5:22.99:23,0,30	0/0:14,0:13:21.10:0,21,314	0/0:14,0:10:23.19:0,23,214	0/0:20,0:20:51.85:0,52,659	1/1:6,24:30:86.21:781,86,0	1/1:5,5:8:17.32:143,17,0	0/1:39,0:39:99:225,0,292	0/0:13,0:13:18.29:0,18,87	0/0:19,0:19:52.88:0,53,355	0/0:25,0:25:57.94:0,58,376	0/1:3,5:8:0.73:152,0,1	1/1:4,4:8:19.09:130,19,0	1/1:5,6:11:26.13:212,26,0	0/0:24,0:24:47.66:0,48,425	0/0:16,0:15:36.25:0,36,219	0/0:14,0:14:35.14:0,35,157	0/1:25,1:26:23.98:24,0,195	0/1:18,0:18:97.52:159,0,98	0/0:21,0:21:0.56:0,1,151	0/0:7,0:6:11.03:0,11,59	1/1:5,3:7:0.92:70,1,0	1/1:4,4:8:14.96:125,15,0	1/1:1,3:4:8.99:85,9,0	1/1:7,12:19:48.59:391,49,0	0/0:25,0:24:64.22:0,64,434	0/0:33,0:32:84.93:0,85,551	0/0:14,0:14:31.59:0,32,183
chr10	22190506	.	T	TA	1810.80	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=0.752;DP=473;FS=9.054;HRun=0;HaplotypeScore=97.8982;InbreedingCoeff=0.9697;MQ=72.71;MQ0=3;MQRankSum=-3.918;QD=16.61;ReadPosRankSum=-0.502;VQSLOD=5.6592;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:34.17:0,34,359	0/0:5,0:5:11.18:0,11,63	0/0:15,0:14:26.06:0,26,353	0/0:13,0:9:22.76:0,23,183	0/0:19,0:19:51.86:0,52,660	1/1:7,23:30:78.70:622,79,0	1/1:6,5:9:25.76:204,26,0	0/0:37,0:37:99:0,101,537	0/0:13,0:13:20.24:0,20,120	0/0:19,0:19:56.06:0,56,362	0/0:27,0:27:73.05:0,73,461	1/1:2,5:7:18.83:131,19,0	1/1:5,4:9:21.04:138,21,0	1/1:6,6:12:26.91:228,27,0	0/0:26,0:26:50.69:0,51,449	0/0:17,0:16:47.19:0,47,302	0/0:14,0:14:37.05:0,37,198	0/0:24,0:24:40.82:0,41,232	0/0:18,0:18:40.11:0,40,241	0/0:22,0:22:62.13:0,62,359	0/0:6,0:5:8.71:0,9,48	1/1:5,3:7:19.85:141,20,0	1/1:5,3:8:11.35:71,11,0	1/1:1,3:4:11.99:102,12,0	1/1:8,12:20:51.64:385,52,0	0/0:22,0:21:59.01:0,59,380	0/0:32,0:31:88.38:0,88,549	0/0:14,0:14:38.25:0,38,231
chr10	22194018	.	A	AT	3812.81	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-0.118;DP=591;FS=8.879;HRun=6;HaplotypeScore=135.9732;InbreedingCoeff=0.9233;MQ=75.73;MQ0=2;MQRankSum=-3.751;QD=28.88;ReadPosRankSum=0.828;VQSLOD=1.8896;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:34.62:0,35,385	0/0:15,0:15:45.10:0,45,459	0/0:21,0:20:41.20:0,41,384	0/0:18,0:16:38.72:0,39,367	0/0:27,0:27:66.64:0,67,378	0/0:26,0:26:44.77:0,45,339	0/0:13,0:13:29.16:0,29,180	0/0:35,0:35:99:0,99,990	0/0:15,0:15:42.08:0,42,421	1/1:8,17:25:72.20:850,72,0	1/1:8,12:20:45.08:514,45,0	0/0:17,0:17:42.02:0,42,221	0/0:20,0:20:55.36:0,55,340	0/0:19,0:19:42.28:0,42,231	0/0:17,1:18:0.55:0,1,148	1/1:5,11:16:27.11:453,27,0	0/0:33,0:33:84.15:0,84,846	0/0:25,0:25:57.06:0,57,563	0/0:17,0:17:45.10:0,45,459	0/0:27,0:27:75.15:0,75,758	0/0:9,0:9:24.05:0,24,245	0/0:16,0:16:31.35:0,31,157	0/0:26,0:26:62.51:0,63,371	0/0:13,0:13:25.79:0,26,135	0/0:16,0:16:4.37:0,4,134	1/1:8,21:29:57.68:827,58,0	1/1:9,23:32:66.17:910,66,0	1/1:1,9:10:21.07:259,21,0
chr10	22194043	.	GTTTT	G	6186.84	PASS	AB=0.599;AC=26;AF=0.464;AN=56;BaseQRankSum=3.856;DP=591;FS=3.116;HRun=14;HaplotypeScore=168.8432;InbreedingCoeff=0.7109;MQ=67.81;MQ0=2;MQRankSum=-4.319;QD=20.76;ReadPosRankSum=7.953;VQSLOD=1.4738;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:14,0:35:13.88:14,0,98	0/0:5,0:14:23.47:0,23,145	0/0:25,0:19:39.08:0,39,553	0/0:21,0:15:33.26:0,33,370	1/1:5,29:35:79.28:1066,79,0	1/1:2,20:23:49.39:674,49,0	1/1:3,11:14:30.01:420,30,0	0/0:10,0:31:69.94:0,70,478	0/0:2,0:13:35.20:0,35,225	0/1:8,0:22:37.18:37,0,43	0/1:4,2:14:40.93:73,0,41	1/1:3,12:15:30.05:424,30,0	1/1:4,15:20:46.35:639,46,0	1/1:4,14:19:40.31:555,40,0	1/1:2,10:12:24.06:340,24,0	0/1:5,0:19:23.09:53,0,23	0/0:7,0:35:73.51:0,74,492	0/0:7,0:20:13.89:0,14,96	0/0:7,0:17:32.20:0,32,190	0/0:10,0:28:63.21:0,63,466	0/0:4,0:10:20.69:0,21,145	1/1:2,11:14:28.20:359,28,0	1/1:3,19:23:52.12:724,52,0	1/1:2,15:17:20.54:366,21,0	1/1:4,12:16:35.95:442,36,0	0/0:11,0:28:62.24:0,62,443	0/0:14,0:39:91.70:0,92,626	0/0:4,0:12:33.50:0,33,249
chr10	22194056	.	TTC	T	460.53	PASS	AB=0.965;AC=12;AF=0.214;AN=56;BaseQRankSum=-2.315;DP=566;FS=44.355;HRun=0;HaplotypeScore=152.5613;InbreedingCoeff=-0.0201;MQ=71.79;MQ0=2;MQRankSum=-0.317;QD=2.04;ReadPosRankSum=4.578;VQSLOD=0.9318;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:58.26:0,58,369	1/1:9,0:9:11.37:34,11,0	0/0:22,0:17:36:0,36,402	0/0:25,0:19:14.48:0,14,231	0/0:35,0:35:44.53:0,45,257	0/0:23,0:23:42.20:0,42,181	0/0:12,0:12:12.68:0,13,53	0/1:30,0:30:2.81:3,0,176	0/1:15,1:16:75.69:76,0,77	0/0:19,0:19:4.70:0,5,142	0/0:15,0:15:18.96:0,19,132	0/0:17,0:17:37.61:0,38,202	0/0:19,0:19:33.55:0,34,135	0/0:16,0:16:35.51:0,36,140	0/0:13,0:13:25.62:0,26,144	0/0:17,0:17:13.89:0,14,96	0/1:34,0:34:90.60:100,0,91	0/1:16,1:17:22.29:22,0,64	0/1:12,1:13:30.19:30,0,31	0/1:24,0:24:27.40:27,0,114	0/1:9,0:9:2.58:3,0,58	0/0:16,0:16:35.34:0,35,223	0/0:24,0:24:46.16:0,46,220	0/0:17,0:17:25.12:0,25,108	0/0:17,0:17:35.64:0,36,210	0/1:24,1:25:84.44:84,0,87	0/1:35,2:37:83.60:187,0,84	0/1:11,1:12:5.32:43,0,5
chr10	22194646	.	G	GAAGACAGA	1366.36	PASS	AB=1.000;AC=14;AF=0.250;AN=56;BaseQRankSum=5.326;DP=649;FS=2.562;HRun=0;HaplotypeScore=178.8364;InbreedingCoeff=0.1664;MQ=75.49;MQ0=8;MQRankSum=0.682;QD=5.42;ReadPosRankSum=-1.457;VQSLOD=2.1453;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:54.16:0,54,858	0/0:7,0:7:14.54:0,15,269	0/0:28,0:16:30.60:0,31,511	0/0:49,0:29:52.79:0,53,834	0/0:18,0:18:3.49:0,3,58	0/0:19,0:19:1:0,1,21	0/1:29,0:29:13.14:38,0,13	0/0:30,0:30:81.12:0,81,1530	0/0:24,0:24:47.47:0,47,844	0/0:19,0:19:42.14:0,42,770	0/0:11,0:11:17.80:0,18,269	0/1:19,0:19:34.95:91,0,35	1/1:22,0:22:3.01:55,3,0	0/0:5,26:33:0.15:0,0,1	0/1:32,0:32:99:117,0,424	0/0:29,0:28:62.91:0,63,967	0/0:20,0:19:45.13:0,45,961	0/0:19,0:18:30.02:0,30,625	0/0:17,0:17:39.10:0,39,814	0/0:26,0:26:53.31:0,53,1034	0/0:24,0:23:60.20:0,60,1304	1/1:18,0:17:29.86:313,30,0	1/1:14,0:13:0.85:132,1,0	0/1:27,0:26:0.59:336,0,1	0/1:21,0:19:14.02:211,0,14	0/1:29,0:29:80.58:81,0,304	0/1:35,0:35:99:121,0,438	0/1:6,0:6:17.48:26,0,17
chr10	22194651	.	CAGACAGAG	C	1614.10	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=-4.395;DP=702;FS=5.933;HRun=0;HaplotypeScore=176.7906;InbreedingCoeff=0.7601;MQ=68.12;MQ0=9;MQRankSum=-1.196;QD=19.22;ReadPosRankSum=3.157;VQSLOD=2.4703;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:27:99:260,0,333	0/0:7,0:7:14.99:0,15,228	0/0:25,0:13:24.73:0,25,242	0/0:45,0:25:31.59:0,32,446	0/0:19,0:19:11.92:0,12,164	0/0:26,0:25:15.04:0,15,312	0/0:32,0:32:11.79:0,12,211	0/0:36,0:36:88.70:0,89,838	0/0:23,0:23:51.02:0,51,917	1/1:18,2:20:46.10:603,46,0	1/1:10,0:10:20.98:175,21,0	0/0:21,0:21:13.25:0,13,249	0/0:28,0:28:9.50:0,10,226	0/0:32,0:32:5.99:0,6,50	0/0:37,0:37:89.98:0,90,1135	1/1:23,3:26:65.97:724,66,0	0/0:23,0:22:53.92:0,54,1096	0/0:22,0:22:37.22:0,37,593	0/0:16,0:16:41.99:0,42,679	0/0:25,0:25:55.98:0,56,680	0/0:27,0:26:69.01:0,69,1411	0/0:24,0:23:21.87:0,22,402	0/0:20,0:19:33.44:0,33,432	0/0:32,0:30:53.97:0,54,877	0/0:24,0:22:38.98:0,39,410	0/0:31,0:31:29.97:0,30,1654	0/0:35,0:36:93.70:0,94,1384	0/0:7,0:7:17.86:0,18,259
chr10	22194655	.	C	CAG	1279.90	PASS	AB=0.996;AC=30;AF=0.625;AN=48;BaseQRankSum=-0.149;DP=730;FS=31.726;HRun=0;HaplotypeScore=138.2156;InbreedingCoeff=0.0057;MQ=63.44;MQ0=10;MQRankSum=0.856;QD=2.43;ReadPosRankSum=2.066;VQSLOD=0.9336;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:2.09:0,2,7	1/1:8,0:8:3:25,3,0	./.	./.	1/1:23,0:23:6:56,6,0	0/1:26,0:25:43.69:44,0,50	1/1:34,1:35:5.99:77,6,0	1/1:37,0:37:1.72:4,2,0	0/1:22,0:22:17.32:112,0,17	0/0:18,0:18:5.68:0,6,28	./.	0/1:22,0:22:21.45:24,0,21	0/1:31,0:31:15.09:18,0,15	0/0:39,0:39:2.88:0,3,25	1/1:37,0:37:11.83:101,12,0	0/0:27,0:26:7.81:0,8,33	0/1:24,1:24:52.13:124,0,52	1/1:13,8:21:6.49:89,6,0	./.	1/1:23,0:23:3.01:37,3,0	0/1:27,0:26:0.52:131,0,1	1/1:27,0:26:5.74:35,6,0	0/1:19,0:18:21.56:31,0,22	0/1:33,0:32:17.98:18,0,84	0/1:27,0:25:3.97:4,0,26	1/1:35,0:35:18.29:265,18,0	1/1:40,0:39:25.66:224,26,0	0/1:7,0:7:0.01:0,0,0
chr10	22194657	.	G	GAC	3124.62	PASS	AB=0.826;AC=21;AF=0.375;AN=56;BaseQRankSum=1.474;DP=744;FS=6.252;HRun=0;HaplotypeScore=136.1571;InbreedingCoeff=0.2265;MQ=62.24;MQ0=11;MQRankSum=2.176;QD=7.17;ReadPosRankSum=3.347;VQSLOD=2.7206;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:59.91:0,60,498	0/0:8,0:8:8.99:0,9,75	0/0:24,0:12:17.93:0,18,233	0/0:40,0:20:25.83:0,26,352	1/1:9,14:24:5.72:72,6,0	0/1:9,15:24:71.59:73,0,72	1/1:9,23:34:5.13:92,5,0	0/0:36,0:37:72.20:0,72,589	0/0:24,0:24:13.15:0,13,316	0/0:18,0:18:47.68:0,48,408	0/0:11,0:11:17.95:0,18,145	0/1:11,14:27:11.44:49,0,11	0/1:11,2:31:22.68:23,0,54	0/1:38,0:38:34.09:34,0,74	1/1:36,2:38:67.79:720,68,0	0/0:27,0:26:67.75:0,68,506	0/0:26,0:25:13.14:0,13,392	0/1:21,0:21:8.20:8,0,201	0/0:14,0:14:9.77:0,10,245	0/0:22,0:22:14.47:0,14,331	0/0:27,0:26:23.55:0,24,441	1/1:29,1:28:12.88:242,13,0	0/1:22,0:21:8.97:189,0,9	0/1:32,1:31:54.71:277,0,55	0/1:28,0:26:63.10:206,0,63	0/1:14,20:36:99:572,0,136	1/1:38,3:40:51.19:662,51,0	1/1:8,0:8:0.23:87,0,0
chr10	22194715	.	T	TCCA	1501.58	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-2.192;DP=672;FS=19.457;HRun=0;HaplotypeScore=125.3493;InbreedingCoeff=0.9968;MQ=77.01;MQ0=3;MQRankSum=-1.807;QD=50.05;ReadPosRankSum=1.131;VQSLOD=3.9384;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,26:30:72.25:1596,72,0	0/0:12,0:12:36.12:0,36,583	0/0:23,0:20:42.09:0,42,670	0/0:34,0:23:47.25:0,47,699	0/0:22,0:22:63.20:0,63,1005	0/0:27,0:27:72.25:0,72,1176	0/0:20,0:19:48.11:0,48,702	0/0:43,0:43:99:0,108,1715	0/0:25,0:25:75.26:0,75,1218	0/0:20,0:20:57.16:0,57,902	0/0:20,0:20:54.18:0,54,882	0/0:24,0:24:63.22:0,63,1029	0/0:19,0:19:51.17:0,51,829	0/0:28,0:28:78.27:0,78,1271	0/0:32,0:32:87.30:0,87,1420	0/0:26,0:26:66.21:0,66,1054	0/0:22,0:22:63.21:0,63,1023	0/0:11,0:12:24.04:0,24,363	0/0:21,0:21:57.15:0,57,875	0/0:29,0:29:87.28:0,87,1394	0/0:30,0:30:81.28:0,81,1319	0/0:24,0:24:66.21:0,66,1054	0/0:25,0:25:66.23:0,66,1078	0/0:28,0:26:69.22:0,69,1102	0/0:27,0:27:78.27:0,78,1263	0/0:18,0:18:51.17:0,51,832	0/0:18,0:18:51.17:0,51,812	0/0:10,0:10:27.09:0,27,441
chr10	22194745	.	G	GCC	4057.17	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-11.179;DP=754;FS=1.493;HRun=2;HaplotypeScore=104.0915;InbreedingCoeff=0.9966;MQ=86.98;MQ0=1;MQRankSum=-0.911;QD=52.01;ReadPosRankSum=1.504;VQSLOD=3.4893;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:84.28:0,84,1236	0/0:11,0:11:27.09:0,27,398	0/0:32,0:32:86.92:0,87,1169	0/0:22,0:22:56.98:0,57,805	0/0:26,0:26:78.23:0,78,1125	0/0:26,0:26:72.24:0,72,1059	0/0:21,0:20:57.19:0,57,839	0/0:45,0:45:99:0,129,1877	0/0:31,0:31:93.30:0,93,1350	1/1:0,20:20:60.18:1089,60,0	1/1:0,24:24:72.25:1338,72,0	0/0:31,0:31:87.29:0,87,1279	0/0:25,0:25:69.23:0,69,1015	0/0:39,0:39:99:0,114,1678	0/0:35,0:35:99:0,99,1439	1/1:0,34:34:87.30:1630,87,0	0/0:26,0:26:75.21:0,75,1076	0/0:12,0:12:33.11:0,33,486	0/0:14,0:14:39.13:0,39,573	0/0:38,0:38:99:0,108,1591	0/0:29,0:29:84.28:0,84,1236	0/0:37,0:37:99:0,108,1591	0/0:25,0:25:69.23:0,69,1016	0/0:32,0:31:77.96:0,78,1145	0/0:30,0:30:87.29:0,87,1281	0/0:25,1:25:75.24:0,75,1088	0/0:25,0:25:72.24:0,72,1060	0/0:7,0:7:18.01:0,18,244
chr10	22195440	.	CT	C	12745.43	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=6.536;DP=681;FS=3.198;HRun=2;HaplotypeScore=71.2499;InbreedingCoeff=0.9993;MQ=80.46;MQ0=0;MQRankSum=-3.217;QD=35.90;ReadPosRankSum=4.083;VQSLOD=5.4690;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:69.23:0,69,1034	0/0:7,0:7:21.07:0,21,315	0/0:31,0:31:93.24:0,93,1315	0/0:17,0:17:41.08:0,41,617	1/1:0,28:28:81.23:1034,81,0	1/1:1,24:25:69.18:877,69,0	1/1:0,13:13:39.13:506,39,0	0/0:39,0:39:99:0,114,1635	0/0:18,0:18:54.15:0,54,751	0/0:27,0:27:81.26:0,81,1178	0/0:31,0:31:93.29:0,93,1355	1/1:0,24:24:63.20:818,63,0	1/1:0,30:30:84.27:1091,84,0	1/1:0,20:20:54.18:701,54,0	1/1:0,24:24:60.20:779,60,0	0/0:27,0:27:78.26:0,78,1169	0/0:24,0:24:72.16:0,72,1051	0/0:13,0:13:39.13:0,39,584	0/0:23,0:23:63.21:0,63,933	0/0:32,0:32:87.25:0,87,1228	0/0:14,0:14:42.13:0,42,610	1/1:0,25:25:72.15:913,72,0	1/1:0,36:36:99:1341,105,0	1/1:0,14:14:42.14:545,42,0	1/1:2,27:29:30.28:890,30,0	1/1:1,36:37:66.37:1344,66,0	1/1:0,36:36:99:1363,105,0	1/1:0,14:14:42.14:545,42,0
chr10	22195957	.	G	GT	1983.18	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-2.517;DP=683;FS=3.108;HRun=6;HaplotypeScore=79.1147;InbreedingCoeff=0.9782;MQ=88.20;MQ0=0;MQRankSum=-2.705;QD=27.93;ReadPosRankSum=2.633;VQSLOD=4.4126;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:57.10:0,57,572	0/0:8,0:8:24.05:0,24,245	0/0:26,0:26:65.37:0,65,629	0/0:22,0:22:54.08:0,54,537	0/0:34,0:34:96.21:0,96,979	0/0:24,0:24:60.13:0,60,612	0/0:25,0:25:66.13:0,66,666	0/0:41,0:41:99:0,105,1047	0/0:25,0:25:70.97:0,71,709	0/0:17,0:17:50.98:0,51,504	0/0:30,0:30:87.16:0,87,873	0/0:22,0:22:66.12:0,66,660	0/0:28,0:28:81.18:0,81,825	0/0:19,0:19:54.10:0,54,543	0/0:30,0:30:75.16:0,75,765	0/0:26,0:26:72.16:0,72,735	0/0:25,0:25:69.11:0,69,687	0/0:27,0:27:75.06:0,75,742	0/0:24,0:24:60.13:0,60,611	0/0:35,0:35:99:0,102,1032	0/0:16,0:16:45.10:0,45,459	0/0:26,0:26:66.14:0,66,673	0/0:21,0:21:63.11:0,63,629	0/0:17,0:17:45.10:0,45,459	0/0:25,0:25:72.13:0,72,720	1/1:4,25:29:44.63:875,45,0	1/1:3,36:39:90.18:1132,90,0	1/1:0,3:3:9.03:113,9,0
chr10	22198439	.	CT	C	5395.34	PASS	AB=0.912;AC=24;AF=0.429;AN=56;BaseQRankSum=2.815;DP=672;FS=4.884;HRun=10;HaplotypeScore=85.9778;InbreedingCoeff=0.8255;MQ=79.25;MQ0=0;MQRankSum=0.059;QD=17.13;ReadPosRankSum=4.346;VQSLOD=5.5108;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:29:58.74:0,59,329	0/0:12,0:11:33.07:0,33,355	0/1:34,2:29:12.82:13,0,212	0/0:34,1:23:2.11:0,2,208	1/1:3,23:26:59.97:521,60,0	1/1:2,19:22:53.02:449,53,0	1/1:3,15:18:44.98:390,45,0	0/0:25,1:26:34.11:0,34,604	0/0:21,1:22:34.09:0,34,596	0/0:5,0:20:43.44:0,43,244	0/0:4,0:30:74.03:0,74,388	1/1:4,27:31:68.98:599,69,0	1/1:3,25:28:59.98:521,60,0	1/1:3,20:24:56.02:475,56,0	1/1:1,18:20:53.03:449,53,0	0/0:3,0:18:45.82:0,46,265	0/0:16,1:17:13.01:0,13,359	0/1:11,2:14:22.18:22,0,216	0/0:21,1:22:22.07:0,22,472	0/0:35,1:36:64.38:0,64,922	0/0:21,0:21:51.13:0,51,556	1/1:4,17:21:20.81:409,21,0	1/1:2,17:20:47.02:397,47,0	1/1:3,22:25:62.99:547,63,0	1/1:1,27:29:71.02:605,71,0	0/0:18,1:21:18.89:0,19,412	0/0:30,1:31:61.17:0,61,896	0/0:16,0:16:42.11:0,42,457
chr10	22200013	.	GA	G	14011.91	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-0.164;DP=629;FS=28.537;HRun=8;HaplotypeScore=112.6376;InbreedingCoeff=0.9370;MQ=65.30;MQ0=2;MQRankSum=-2.606;QD=23.20;ReadPosRankSum=4.784;VQSLOD=3.3049;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,47:51:99:1246,129,0	1/1:2,3:5:6.01:58,6,0	0/0:16,0:14:41.61:0,42,477	0/0:9,0:8:19.30:0,19,194	1/1:5,28:33:84.13:807,84,0	1/1:1,27:28:72.12:695,72,0	1/1:6,23:28:60.09:578,60,0	1/1:3,34:34:90.07:851,90,0	1/1:3,16:19:39.06:377,39,0	1/1:2,22:24:60.09:579,60,0	1/1:2,18:20:48.07:462,48,0	1/1:1,16:17:42.07:405,42,0	1/1:1,11:12:30.05:289,30,0	1/1:3,21:24:32.21:522,32,0	1/1:0,15:15:39.06:376,39,0	1/1:3,21:24:54.09:522,54,0	1/1:4,28:31:78.12:753,78,0	1/1:3,25:28:54.08:521,54,0	1/1:1,20:21:60.08:572,60,0	1/1:2,25:27:72.11:693,72,0	1/1:0,17:17:42.07:406,42,0	1/1:2,13:15:30.04:290,30,0	1/1:2,20:21:39.50:374,40,0	1/1:2,22:24:66.11:637,66,0	1/1:1,25:26:63.10:608,63,0	1/1:1,20:20:60.10:579,60,0	1/1:3,25:28:69.11:666,69,0	1/1:0,5:5:15.02:145,15,0
chr10	22200326	.	AT	A	1097.82	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=6.699;DP=599;FS=7.538;HRun=9;HaplotypeScore=83.0432;InbreedingCoeff=0.9135;MQ=69.02;MQ0=3;MQRankSum=-1.136;QD=20.71;ReadPosRankSum=1.717;VQSLOD=4.3241;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,117,1337	0/0:3,0:3:3.01:0,3,35	0/0:22,0:15:27.64:0,28,307	0/0:10,0:8:15:0,15,154	0/0:28,0:29:84.05:0,84,923	0/0:23,0:24:63.02:0,63,707	0/0:19,0:20:56.95:0,57,611	0/0:29,0:29:45.12:0,45,510	0/0:16,0:16:48.12:0,48,533	0/0:19,0:21:60:0,60,663	0/0:23,1:25:35.63:0,36,645	0/0:17,0:18:50.98:0,51,566	0/0:17,0:17:45.12:0,45,511	0/0:17,0:17:42.12:0,42,485	0/0:21,0:21:57.17:0,57,658	0/0:21,0:21:57.15:0,57,640	0/0:34,0:34:90.24:0,90,1026	0/0:17,0:17:39.10:0,39,437	0/0:26,1:27:35.64:0,36,641	0/0:26,0:26:69.19:0,69,787	0/0:20,0:20:51.15:0,51,589	0/0:20,1:21:26.65:0,27,529	0/0:18,0:18:51.15:0,51,588	0/0:27,0:27:75.22:0,75,862	0/0:15,0:15:36.07:0,36,394	1/1:2,16:18:48.02:439,48,0	1/1:4,28:32:78.02:714,78,0	1/1:0,3:3:9:82,9,0
chr10	22200666	.	CAT	C	17335.04	PASS	AB=1.000;AC=53;AF=0.946;AN=56;BaseQRankSum=-1.145;DP=570;FS=0.000;HRun=0;HaplotypeScore=89.1213;InbreedingCoeff=0.6771;MQ=69.59;MQ0=1;MQRankSum=-2.590;QD=30.79;ReadPosRankSum=1.355;VQSLOD=6.7498;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,20:22:57.19:733,57,0	1/1:1,7:8:8.87:116,9,0	0/0:7,0:7:5.99:0,6,60	0/1:5,0:5:2.74:3,0,20	1/1:5,32:37:42.69:1108,43,0	1/1:3,17:20:48.16:618,48,0	1/1:2,12:14:27.09:348,27,0	1/1:11,28:39:84.26:1067,84,0	1/1:4,17:21:45.14:579,45,0	1/1:4,18:22:54.65:695,55,0	1/1:2,15:17:45.15:579,45,0	1/1:1,15:16:39.13:502,39,0	1/1:2,29:31:84.27:1081,84,0	1/1:2,23:25:66.21:849,66,0	1/1:5,21:26:54.18:695,54,0	1/1:1,23:24:69.22:888,69,0	1/1:4,14:17:39.13:502,39,0	1/1:2,10:12:30.10:386,30,0	1/1:5,13:19:36.12:463,36,0	1/1:2,30:32:84.27:1081,84,0	1/1:4,15:19:42.14:540,42,0	1/1:2,25:27:63.20:811,63,0	1/1:2,20:22:57.19:734,57,0	1/1:1,15:16:42.14:541,42,0	1/1:3,14:17:39.13:502,39,0	1/1:2,27:29:81.25:1029,81,0	1/1:2,18:20:54.18:695,54,0	1/1:0,5:5:15.05:193,15,0
chr10	22202121	.	TTA	T	21375.64	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-3.780;DP=669;FS=0.000;HRun=0;HaplotypeScore=89.9359;InbreedingCoeff=0.9160;MQ=86.20;MQ0=3;MQRankSum=-9.252;QD=34.42;ReadPosRankSum=7.017;VQSLOD=6.9799;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,33:35:81.27:1113,81,0	1/1:2,10:12:27.09:371,27,0	0/0:24,0:24:66.01:0,66,1054	0/0:23,0:24:48.16:0,48,821	1/1:1,25:26:72.24:989,72,0	1/1:1,29:29:75.25:1031,75,0	1/1:2,23:25:57.19:783,57,0	1/1:8,27:35:78.24:1053,78,0	1/1:3,21:24:57.19:783,57,0	1/1:2,25:27:75.24:1015,75,0	1/1:1,27:28:72.24:988,72,0	1/1:1,17:18:48.16:659,48,0	1/1:1,24:25:69.23:948,69,0	1/1:1,16:17:48.16:660,48,0	1/1:3,23:26:66.22:907,66,0	1/1:1,30:31:81.27:1114,81,0	1/1:3,27:30:81.27:1113,81,0	1/1:1,24:25:66.18:886,66,0	1/1:7,17:24:51.17:700,51,0	1/1:0,32:32:90.30:1236,90,0	1/1:0,20:19:51.17:701,51,0	1/1:0,14:14:32.85:453,33,0	1/1:3,19:22:51.17:701,51,0	1/1:3,16:19:48.16:660,48,0	1/1:3,20:22:51.17:701,51,0	1/1:4,22:26:63.21:864,63,0	1/1:0,25:25:66.22:906,66,0	1/1:0,2:2:3.01:41,3,0
chr10	22202524	.	G	GTCAAC	5920.84	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-6.924;DP=607;FS=5.282;HRun=0;HaplotypeScore=108.5226;InbreedingCoeff=0.9970;MQ=84.75;MQ0=0;MQRankSum=-6.093;QD=75.91;ReadPosRankSum=0.443;VQSLOD=6.6926;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,99,2002	0/0:6,0:6:18.06:0,18,378	0/0:22,0:22:57.16:0,57,1096	0/0:20,0:20:57.19:0,57,1158	1/1:2,20:22:57.19:1610,57,0	0/0:17,0:17:51.18:0,51,1071	0/0:24,0:24:66.23:0,66,1380	0/0:37,0:37:99:0,99,2072	0/0:24,0:24:72.25:0,72,1512	0/0:22,0:22:57.20:0,57,1196	0/0:19,0:19:57.20:0,57,1197	0/0:17,0:17:48.16:0,48,1008	0/0:31,0:31:81.28:0,81,1694	0/0:19,0:19:48.15:0,48,956	0/0:23,0:23:66.23:0,66,1354	0/0:27,0:27:75.26:0,75,1575	0/0:39,0:39:80.97:0,81,2060	0/0:12,0:12:36.12:0,36,752	0/0:15,0:15:45.15:0,45,945	0/0:36,0:36:99:0,102,2134	0/0:19,0:19:51.18:0,51,1070	0/0:14,0:14:42.14:0,42,868	0/0:11,0:11:30.10:0,30,630	0/0:20,0:20:57.20:0,57,1197	0/0:20,0:20:60.21:0,60,1248	1/1:5,11:17:45.14:1305,45,0	1/1:6,22:31:75.26:2261,75,0	1/1:0,8:8:24.08:744,24,0
chr10	22202726	.	CT	C	2363.51	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=5.636;DP=580;FS=7.927;HRun=4;HaplotypeScore=98.3312;InbreedingCoeff=0.9964;MQ=71.58;MQ0=0;MQRankSum=-7.587;QD=31.10;ReadPosRankSum=-2.847;VQSLOD=2.1551;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:78.26:0,78,1090	0/0:7,0:7:18.06:0,18,252	0/0:19,0:18:48.13:0,48,621	0/0:14,0:14:29.61:0,30,317	1/1:2,19:21:54.16:642,54,0	0/0:30,0:30:78.26:0,78,1090	0/0:12,0:12:36.09:0,36,469	0/0:28,0:28:72.21:0,72,956	0/0:21,0:21:60.20:0,60,840	0/0:25,0:25:75.24:0,75,1025	0/0:23,0:23:63.21:0,63,879	0/0:16,0:16:45.12:0,45,595	0/0:28,0:28:81.27:0,81,1134	0/0:21,0:21:60.20:0,60,840	0/0:14,0:14:42.14:0,42,588	0/0:22,0:22:60.20:0,60,838	0/0:27,0:27:81.23:0,81,1095	0/0:16,0:16:45.15:0,45,630	0/0:15,0:15:45.14:0,45,614	0/0:31,0:31:93.30:0,93,1273	0/0:8,0:8:24.08:0,24,335	0/0:17,0:17:51.16:0,51,690	0/0:30,0:30:81.23:0,81,1102	0/0:13,0:13:39.13:0,39,546	0/0:39,0:38:99:0,114,1577	1/1:1,20:21:63.19:754,63,0	1/1:0,24:24:72.22:858,72,0	1/1:3,7:10:23.88:270,24,0
chr10	22202735	.	CA	C	7927.19	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=7.255;DP=582;FS=2.003;HRun=10;HaplotypeScore=80.3831;InbreedingCoeff=0.9937;MQ=70.80;MQ0=0;MQRankSum=-0.101;QD=20.97;ReadPosRankSum=3.835;VQSLOD=5.6923;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,27:29:74.98:651,75,0	0/0:6,0:6:12.03:0,12,133	0/0:17,0:16:29.82:0,30,254	0/0:16,1:16:25.91:0,26,213	1/1:7,12:19:20.93:179,21,0	1/1:4,24:28:65.98:573,66,0	1/1:4,10:14:23.98:208,24,0	0/0:23,2:25:28.08:0,28,531	0/0:22,0:22:60.15:0,60,655	1/1:3,22:25:67.80:578,68,0	1/1:1,25:26:62.96:547,63,0	1/1:1,17:18:47.98:417,48,0	1/1:4,23:27:68.98:599,69,0	1/1:1,18:19:47.99:417,48,0	0/0:3,0:17:43.06:0,43,249	1/1:1,20:21:29.81:488,30,0	0/0:24,1:25:40.12:0,40,671	0/0:15,0:15:45.08:0,45,482	0/0:19,0:19:51.14:0,51,562	0/0:30,1:31:61.10:0,61,870	0/0:10,0:10:30.06:0,30,322	1/1:1,14:15:38.99:339,39,0	1/1:6,27:33:74.97:651,75,0	1/1:2,12:14:35.98:313,36,0	1/1:3,33:36:98.97:859,99,0	1/1:7,14:21:47.97:416,48,0	1/1:7,18:25:29.79:487,30,0	1/1:3,5:8:23.99:207,24,0
chr10	22202885	.	G	GT	439.99	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-1.051;DP=663;FS=1.006;HRun=2;HaplotypeScore=72.1750;InbreedingCoeff=0.9834;MQ=81.27;MQ0=0;MQRankSum=-0.385;QD=27.50;ReadPosRankSum=-0.129;VQSLOD=3.1953;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:42:99:0,105,1284	0/0:16,0:16:45.14:0,45,558	0/0:24,0:24:63.16:0,63,751	0/0:33,0:33:84.25:0,84,1008	1/1:1,15:16:42.01:535,42,0	0/0:29,0:29:87.25:0,87,1053	0/0:27,0:27:78.23:0,78,953	0/0:42,0:42:99:0,114,1401	0/0:23,0:23:63.18:0,63,766	0/0:29,0:29:81.22:0,81,988	0/0:15,0:15:45.14:0,45,558	0/0:25,0:24:66.21:0,66,818	0/0:19,0:19:39.12:0,39,482	0/0:22,0:22:66.18:0,66,792	0/0:23,0:23:60.19:0,60,743	0/0:17,0:17:48.15:0,48,595	0/0:28,0:28:84.26:0,84,1039	0/0:10,0:10:27.08:0,27,335	0/0:15,0:14:45.12:0,45,542	0/0:29,0:29:87.27:0,87,1078	0/0:28,0:28:84.23:0,84,1016	0/0:20,0:20:60.19:0,60,744	0/0:19,0:19:57.18:0,57,706	0/0:29,0:29:78.24:0,78,966	0/0:22,0:22:66.19:0,66,805	0/0:22,0:22:57.18:0,57,706	0/0:33,0:33:96.30:0,96,1189	0/0:5,0:5:15.05:0,15,186
chr10	22203026	.	TTCTCTCTCTCTC	T	2273.02	PASS	AC=20;AF=0.370;AN=54;BaseQRankSum=5.454;DP=508;FS=7.909;HRun=0;HaplotypeScore=169.5382;InbreedingCoeff=0.7332;MQ=67.67;MQ0=24;MQRankSum=-2.812;QD=15.26;ReadPosRankSum=2.838;VQSLOD=1.9469;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:19:12.04:0,12,439	0/0:9,0:9:5.97:0,6,155	./.	0/0:41,0:19:3.01:0,3,37	0/0:20,0:19:9.03:0,9,267	1/1:20,0:19:15.52:323,16,0	1/1:7,0:5:5.77:114,6,0	0/0:36,0:36:13.76:0,14,286	0/0:13,0:13:12.04:0,12,369	0/0:28,0:28:46.50:0,46,1561	0/0:27,0:27:6.02:0,6,217	1/1:13,0:12:6.02:140,6,0	1/1:5,2:6:6.02:205,6,0	1/1:17,0:16:9.03:216,9,0	1/1:21,0:19:24:614,24,0	0/0:14,0:13:6.02:0,6,148	0/0:17,0:16:3.29:0,3,462	0/0:6,0:5:12.04:0,12,548	0/0:17,0:16:13.29:0,13,427	0/0:25,0:25:12.04:0,12,193	0/0:17,0:17:12.04:0,12,374	1/1:12,0:12:9.03:214,9,0	1/1:19,0:18:15.01:293,15,0	1/1:14,1:14:5.67:78,6,0	1/1:17,1:16:9.03:264,9,0	0/0:18,0:18:18.05:0,18,322	0/0:18,0:19:9.03:0,9,274	0/0:9,0:7:3.01:0,3,48
chr10	22203058	.	CT	C	180.10	PASS	AB=0.654;AC=1;AF=0.018;AN=56;BaseQRankSum=5.359;DP=492;FS=7.502;HRun=1;HaplotypeScore=91.2646;InbreedingCoeff=-0.0400;MQ=38.29;MQ0=75;MQRankSum=-3.524;QD=10.59;ReadPosRankSum=-0.122;VQSLOD=1.1439;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:22:17.98:0,18,214	0/0:11,0:9:6.49:0,6,109	0/0:11,0:5:8.19:0,8,94	0/0:26,0:7:8.30:0,8,90	0/0:14,0:13:10.16:0,10,149	0/0:22,0:16:18.80:0,19,133	0/0:15,0:11:6.75:0,7,89	0/0:13,0:10:30.10:0,30,399	0/0:15,0:12:12.04:0,12,172	0/0:27,0:26:69.58:0,70,896	0/0:14,0:14:11.93:0,12,161	0/0:19,0:16:21.01:0,21,234	0/0:14,0:11:10.40:0,10,148	0/0:21,0:16:15.39:0,15,202	0/1:8,9:15:45.64:254,0,46	0/0:15,0:14:27.08:0,27,335	0/0:17,0:13:18.66:0,19,213	0/0:12,0:9:15.05:0,15,220	0/0:15,0:12:33.47:0,33,403	0/0:21,0:17:18.56:0,19,262	0/0:13,0:11:11.85:0,12,171	0/0:19,0:13:29.58:0,30,329	0/0:20,0:16:18.12:0,18,184	0/0:18,0:11:14.83:0,15,184	0/0:18,0:15:19.47:0,19,218	0/0:20,0:18:53.63:0,54,630	0/0:23,0:23:57.93:0,58,717	0/0:14,0:11:33.11:0,33,417
chr10	22203069	.	TCTCTC	T	968.10	PASS	AB=0.950;AC=16;AF=0.286;AN=56;BaseQRankSum=7.491;DP=507;FS=28.790;HRun=0;HaplotypeScore=103.9756;InbreedingCoeff=0.5308;MQ=38.27;MQ0=82;MQRankSum=-5.967;QD=5.50;ReadPosRankSum=1.804;VQSLOD=0.4950;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:25:7.03:0,7,229	0/0:9,0:6:8.86:0,9,146	0/0:27,0:11:27.04:0,27,305	0/0:35,0:8:8.62:0,9,72	0/0:15,0:14:15.66:0,16,245	1/1:17,2:12:12.03:156,12,0	0/1:14,1:13:2.50:40,0,2	0/0:16,0:13:0.20:0,0,352	0/0:15,0:12:9.03:0,9,189	0/0:27,0:26:78.25:0,78,1268	0/0:17,0:17:23.65:0,24,303	1/1:16,0:12:4.51:39,5,0	0/1:17,0:13:22.53:89,0,23	1/1:14,2:11:8.05:93,8,0	0/1:16,0:15:5.22:292,0,5	0/0:13,0:12:26.92:0,27,379	0/0:19,0:15:5.82:0,6,254	0/0:13,0:10:11.57:0,12,314	0/0:13,0:9:22.31:0,22,386	0/0:16,0:12:12.30:0,12,116	0/0:13,0:10:11.84:0,12,169	0/1:15,3:9:31.93:92,0,32	1/1:17,2:15:17.17:161,17,0	1/1:20,1:13:5.23:27,5,0	1/1:15,2:13:11.77:153,12,0	0/0:16,0:14:36.43:0,36,386	0/0:22,0:22:50.49:0,50,662	0/0:15,0:12:34.34:0,34,426
chr10	22203076	.	C	CTC	187.70	PASS	AB=1.000;AC=23;AF=0.426;AN=54;BaseQRankSum=-2.367;DP=535;FS=4.638;HRun=0;HaplotypeScore=109.6343;InbreedingCoeff=0.4525;MQ=42.00;MQ0=78;MQRankSum=2.421;QD=0.66;ReadPosRankSum=-1.306;VQSLOD=1.8538;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:23:6.84:0,7,54	1/1:11,0:8:2.98:38,3,0	1/1:34,0:12:0.94:1,1,0	0/1:48,0:11:0:0,0,1	0/1:16,0:15:0:0,0,1	0/0:20,0:13:8.18:0,8,38	0/0:18,0:16:2.55:0,3,10	0/0:17,0:14:1.99:0,2,6	./.	1/1:18,2:21:11.99:133,12,0	0/1:15,0:15:0.01:0,0,0	0/0:17,0:14:2.80:0,3,14	0/0:19,0:15:5.68:0,6,28	0/0:18,0:13:4.66:0,5,19	0/0:18,0:17:18.92:0,19,90	1/1:9,0:10:3:26,3,0	1/1:17,0:14:8.02:69,8,0	0/1:16,0:12:0:0,0,0	1/1:13,0:10:3.48:39,3,0	0/1:17,0:13:0.13:0,0,0	0/1:9,0:6:0:0,0,0	0/0:19,0:10:5.44:0,5,24	0/0:21,0:17:8.42:0,8,41	0/1:26,0:19:0.14:0,0,0	0/0:18,0:14:8.02:0,8,35	1/1:15,0:13:0.94:2,1,0	0/0:22,0:22:2.84:0,3,14	1/1:15,0:12:0.47:1,0,0
chr10	22203077	.	CTCT	C	518.50	PASS	AB=0.953;AC=17;AF=0.304;AN=56;BaseQRankSum=4.357;DP=541;FS=28.390;HRun=0;HaplotypeScore=107.0339;InbreedingCoeff=0.2078;MQ=45.25;MQ0=78;MQRankSum=-3.437;QD=2.27;ReadPosRankSum=-3.266;VQSLOD=-0.2837;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:24:21.79:22,0,68	0/0:11,0:8:4.94:0,5,45	0/0:36,0:13:30.15:0,30,486	0/0:49,0:13:13.24:0,13,267	0/0:16,0:15:19.28:0,19,204	0/1:20,3:16:31.52:73,0,32	0/1:18,1:17:13.54:25,0,14	0/0:17,0:14:31.46:0,31,359	0/0:13,0:10:2.60:0,3,10	0/0:21,0:20:60.17:0,60,1197	0/0:15,0:15:8.99:0,9,436	0/0:16,0:13:3.74:0,4,25	0/1:19,0:15:3.88:4,0,76	1/1:16,2:13:7.62:72,8,0	1/1:14,4:17:0.56:143,1,0	0/0:11,0:10:7.43:0,7,497	0/1:17,0:14:2.08:2,0,57	0/0:14,0:12:15.87:0,16,147	0/0:13,0:10:17.69:0,18,238	0/1:19,0:15:35.78:62,0,36	1/1:10,0:7:5.68:37,6,0	0/1:17,3:11:32.59:80,0,33	1/1:17,3:17:6.49:111,6,0	0/0:26,1:20:5.67:0,6,19	1/1:15,2:13:0.44:42,0,0	0/0:14,0:12:30.03:0,30,401	0/0:21,0:22:38.61:0,39,772	0/0:13,0:11:33.10:0,33,545
chr10	22203080	.	T	TTCC	3618.41	PASS	AB=0.753;AC=43;AF=0.768;AN=56;BaseQRankSum=3.753;DP=574;FS=5.808;HRun=0;HaplotypeScore=107.2703;InbreedingCoeff=0.5652;MQ=48.08;MQ0=76;MQRankSum=-1.333;QD=8.34;ReadPosRankSum=-0.225;VQSLOD=2.6544;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:9,19:26:11.03:38,0,11	1/1:5,5:7:5.86:90,6,0	0/0:39,0:14:32.57:0,33,363	0/0:53,0:15:13.05:0,13,210	1/1:17,0:16:10.88:30,11,0	1/1:13,10:16:14.34:149,14,0	1/1:5,17:20:12.04:197,12,0	1/1:10,11:19:27.03:413,27,0	1/1:3,10:10:3.01:61,3,0	0/0:21,0:20:57.15:0,57,770	0/0:15,0:15:26.90:0,27,347	1/1:7,8:13:2.64:61,3,0	1/1:10,8:14:9.03:173,9,0	1/1:12,9:17:14.60:138,15,0	1/1:9,8:16:18.05:240,18,0	0/0:11,0:10:24.08:0,24,347	1/1:6,11:15:6.02:123,6,0	1/1:6,11:13:12.51:246,13,0	0/1:6,6:9:7.80:214,0,8	1/1:8,15:20:23.82:289,24,0	1/1:11,0:8:9:99,9,0	1/1:23,0:14:21.01:310,21,0	1/1:11,13:21:20.90:243,21,0	1/1:11,16:22:8.87:162,9,0	1/1:16,1:15:11.06:140,11,0	0/1:13,0:11:23.10:23,0,24	1/1:22,0:22:33.34:141,33,0	1/1:14,0:11:11.47:37,11,0
chr10	22203083	.	C	CTTG	2490.75	PASS	AB=1.000;AC=22;AF=0.393;AN=56;BaseQRankSum=5.782;DP=596;FS=32.281;HRun=0;HaplotypeScore=114.8098;InbreedingCoeff=-0.0839;MQ=50.18;MQ0=76;MQRankSum=0.353;QD=7.52;ReadPosRankSum=5.523;VQSLOD=0.9540;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:27:12.65:0,13,117	1/1:11,0:8:5.04:21,5,0	0/0:43,0:15:38.87:0,39,497	0/0:60,0:18:21.38:0,21,356	1/1:16,2:17:27.05:408,27,0	0/0:24,0:17:6.22:0,6,88	0/1:22,0:20:32.88:54,0,33	0/1:23,0:20:39.97:40,0,425	0/1:14,0:11:18.22:18,0,38	0/0:21,0:20:60.20:0,60,1022	0/0:17,0:17:32.72:0,33,560	0/1:16,0:13:3.91:4,0,30	0/1:18,0:14:42.75:44,0,43	0/0:23,0:18:17.60:0,18,198	0/1:17,0:16:22.48:22,0,41	0/0:11,0:10:30.09:0,30,495	0/1:16,0:14:23.20:23,0,44	0/1:18,0:14:46.81:52,0,47	0/1:14,0:11:10.10:10,0,148	0/0:24,0:20:5.98:0,6,136	0/0:11,0:8:5.87:0,6,50	0/1:22,0:13:15.84:16,0,169	0/1:27,0:23:6.41:6,0,119	1/1:29,0:22:8.11:43,8,0	0/1:16,0:14:29.99:30,0,70	0/1:14,0:12:19.98:510,0,20	1/1:20,2:22:33.31:951,33,0	0/1:14,0:11:18.08:412,0,18
chr10	22203088	.	C	CCTC	3566.21	PASS	AB=0.990;AC=43;AF=0.768;AN=56;BaseQRankSum=3.101;DP=612;FS=5.696;HRun=0;HaplotypeScore=111.8759;InbreedingCoeff=0.5645;MQ=55.01;MQ0=70;MQRankSum=-0.986;QD=7.94;ReadPosRankSum=-0.044;VQSLOD=2.2833;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:31,0:29:18.96:36,0,19	1/1:12,0:9:5.86:90,6,0	0/0:49,0:19:30.80:0,31,360	0/0:64,0:21:15.26:0,15,217	1/1:20,0:20:12.70:36,13,0	1/1:24,0:17:14.34:149,14,0	1/1:23,0:22:12.04:197,12,0	1/1:22,0:20:27.03:413,27,0	1/1:15,0:12:3.01:61,3,0	0/0:21,0:21:57.15:0,57,770	0/0:17,0:17:26.90:0,27,347	1/1:17,0:14:2.64:61,3,0	1/1:18,0:14:9.03:173,9,0	1/1:22,0:17:11.62:117,12,0	1/1:13,0:13:18.05:240,18,0	0/0:11,0:10:24.08:0,24,347	1/1:16,0:14:6.91:124,7,0	1/1:16,0:13:12.51:246,13,0	0/1:16,0:13:7.81:178,0,8	1/1:23,0:19:23.82:289,24,0	1/1:11,0:8:9:99,9,0	1/1:21,0:13:21.01:310,21,0	1/1:25,0:22:20.79:243,21,0	1/1:29,0:22:8.87:162,9,0	1/1:13,5:17:11.06:140,11,0	0/1:14,0:13:23.10:23,0,24	1/1:24,0:24:33.34:141,33,0	1/1:15,0:12:11.47:37,11,0
chr10	22203096	.	T	TC	2376.39	PASS	AB=0.991;AC=17;AF=0.304;AN=56;BaseQRankSum=8.749;DP=641;FS=32.381;HRun=2;HaplotypeScore=101.1830;InbreedingCoeff=0.1381;MQ=59.08;MQ0=57;MQRankSum=-3.814;QD=9.98;ReadPosRankSum=5.395;VQSLOD=-0.2342;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:34:1.98:0,2,282	0/1:14,0:11:7.22:7,0,137	0/0:58,0:27:40.42:0,40,658	0/0:68,0:26:33.11:0,33,492	1/1:2,20:22:36.12:515,36,0	0/0:25,0:19:14.59:0,15,289	0/1:22,0:22:9.07:9,0,100	0/1:26,1:25:75.94:76,0,359	0/0:15,0:13:2.83:0,3,106	0/0:24,0:24:72.22:0,72,912	0/0:16,0:16:36.12:0,36,467	0/0:16,1:14:2.78:0,3,103	0/1:17,0:14:2.39:2,0,100	0/1:21,1:18:17.49:17,0,217	0/0:15,0:15:9.74:0,10,151	0/0:13,0:13:36.12:0,36,466	0/1:15,0:14:5.93:6,0,48	0/1:17,0:13:29.85:30,0,96	0/1:14,0:12:33.32:33,0,213	0/0:26,0:22:35.06:0,35,398	0/0:7,0:5:6.89:0,7,57	0/0:20,1:14:6.47:0,6,248	0/0:28,0:24:23.35:0,23,269	0/0:31,0:24:1.65:0,2,110	0/1:17,0:15:3.67:4,0,197	1/1:3,13:15:6.16:548,6,0	1/1:3,20:23:61.08:869,61,0	1/1:1,11:12:3.64:420,4,0
chr10	22204869	.	T	TACTC	259.77	PASS	AB=0.983;AC=11;AF=0.196;AN=56;BaseQRankSum=9.101;DP=586;FS=15.341;HRun=0;HaplotypeScore=211.8676;InbreedingCoeff=0.0568;MQ=36.51;MQ0=0;MQRankSum=-7.063;QD=1.40;ReadPosRankSum=1.318;VQSLOD=1.6429;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:8.20:0,8,167	0/0:10,0:11:4:0,4,59	0/0:15,0:7:8.86:0,9,290	0/0:7,0:5:6.02:0,6,92	0/0:25,1:26:3.47:0,3,51	1/1:11,0:11:3.93:29,4,0	0/1:11,0:11:31.79:32,0,215	0/0:36,0:36:83.78:0,84,1603	0/0:21,0:21:3.72:0,4,63	0/1:37,2:39:99:249,0,564	0/0:16,1:17:9.89:0,10,170	1/1:28,0:28:0.72:4,1,0	0/0:37,0:37:8.19:0,8,129	0/0:25,0:25:0.84:0,1,4	0/1:52,2:54:12.48:12,0,154	0/0:29,1:30:11.54:0,12,160	0/0:12,0:12:2.22:0,2,87	0/0:9,0:9:19.31:0,19,325	0/1:11,0:10:38.20:38,0,379	0/0:27,0:27:20.90:0,21,277	0/0:27,0:26:39.09:0,39,665	1/1:13,2:15:1.24:14,1,0	0/0:18,1:19:6.83:0,7,117	0/0:13,0:13:1.77:0,2,58	0/0:20,0:20:7.42:0,7,100	0/0:26,0:26:0.21:0,0,694	0/1:17,0:15:4.59:5,0,239	0/0:8,0:8:4.80:0,5,82
chr10	22204894	.	A	ACG	1905.69	PASS	AB=0.804;AC=11;AF=0.196;AN=56;BaseQRankSum=8.631;DP=857;FS=96.230;HRun=0;HaplotypeScore=349.6578;InbreedingCoeff=-0.2645;MQ=39.39;MQ0=2;MQRankSum=-9.640;QD=5.34;ReadPosRankSum=2.962;VQSLOD=-0.1119;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,3:22:25.02:0,25,380	0/1:13,6:19:98.55:99,0,224	0/0:41,0:23:2.98:0,3,838	0/0:35,0:23:62.71:0,63,881	0/0:33,12:45:9.50:0,10,148	0/0:13,3:16:12.78:0,13,199	0/0:14,3:17:26.83:0,27,400	0/0:50,2:53:14:0,14,1790	0/0:23,3:26:23.35:0,23,309	0/1:43,14:57:99:654,0,1513	0/0:24,5:29:14.70:0,15,244	0/1:21,13:34:49.71:50,0,86	0/1:36,9:45:60.86:61,0,364	0/0:26,4:31:13.47:0,13,163	0/0:48,11:59:16.91:0,17,243	0/1:35,7:42:99:128,0,430	0/0:15,0:15:18.27:0,18,251	0/0:13,1:14:39.13:0,39,630	0/0:17,0:17:26.02:0,26,618	0/1:33,10:43:99:110,0,760	0/0:33,0:32:71.97:0,72,1113	0/1:17,1:18:45.96:46,0,89	0/0:26,3:29:12.51:0,13,196	0/0:18,0:18:18.14:0,18,295	0/1:33,6:39:89.22:89,0,270	0/1:24,8:31:99:388,0,739	0/1:12,8:19:99:267,0,261	0/1:3,3:8:78.79:160,0,79
chr10	22204911	.	C	CAT	699.67	PASS	AB=0.888;AC=6;AF=0.107;AN=56;BaseQRankSum=3.188;DP=984;FS=19.581;HRun=0;HaplotypeScore=389.3809;InbreedingCoeff=-0.1181;MQ=39.91;MQ0=12;MQRankSum=-2.072;QD=3.72;ReadPosRankSum=-4.621;VQSLOD=0.7919;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,1:25:32.91:0,33,498	0/0:19,0:20:30.62:0,31,455	0/0:57,0:21:22.32:0,22,519	0/0:46,0:26:44.54:0,45,758	0/1:44,7:51:90.45:90,0,95	0/0:19,0:19:20.56:0,21,321	0/0:21,0:21:32.70:0,33,467	0/0:65,0:65:83.46:0,83,1866	0/0:27,1:28:42.74:0,43,566	0/0:56,0:55:99:0,122,1494	0/0:32,0:32:19.89:0,20,299	0/0:35,0:35:17.62:0,18,246	0/0:45,0:45:46.96:0,47,614	0/0:27,1:28:16.62:0,17,195	0/0:62,0:62:21.26:0,21,290	0/1:39,1:40:7.43:7,0,561	0/1:18,0:18:11.98:12,0,399	0/0:18,0:18:30.84:0,31,580	0/0:29,0:24:66.37:0,66,851	0/0:51,0:51:83.95:0,84,1155	0/0:37,0:36:77.94:0,78,1098	0/0:21,0:21:12.47:0,12,161	0/0:31,0:31:36.15:0,36,480	0/0:20,0:21:25.43:0,25,339	0/0:47,0:47:49.25:0,49,678	0/1:30,3:32:99:257,0,548	0/1:22,4:26:99:203,0,207	0/1:11,9:20:99:250,0,138
chr10	22205455	.	GA	G	4804.01	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-1.985;DP=615;FS=3.359;HRun=9;HaplotypeScore=77.1607;InbreedingCoeff=0.9648;MQ=80.25;MQ0=0;MQRankSum=-0.852;QD=22.88;ReadPosRankSum=4.617;VQSLOD=5.6027;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:15,2:17:14.61:0,15,407	0/0:3,0:3:6.02:0,6,69	0/0:26,0:22:7.29:0,7,188	0/0:27,0:25:44.10:0,44,436	0/0:37,1:38:71.83:0,72,1070	1/1:3,21:24:57.02:521,57,0	1/1:2,16:18:45.02:412,45,0	0/0:21,0:21:47.28:0,47,569	0/0:21,0:21:54.15:0,54,612	0/0:20,0:20:54.15:0,54,613	0/0:32,0:32:93.20:0,93,1023	1/1:2,15:17:42.02:384,42,0	1/1:0,23:23:63.03:576,63,0	1/1:2,18:20:45.02:412,45,0	1/1:3,19:22:51.02:466,51,0	0/0:16,0:16:45.12:0,45,510	0/0:32,0:32:93.22:0,93,1031	0/0:21,0:21:57.15:0,57,645	0/0:16,0:16:42.07:0,42,446	0/0:33,0:33:96.28:0,96,1103	0/0:11,0:11:27.06:0,27,292	1/1:2,22:24:57.38:550,57,0	1/1:2,19:21:51.03:467,51,0	1/1:0,20:20:54.03:494,54,0	1/1:2,19:21:57.03:522,57,0	0/0:30,0:30:84.25:0,84,965	0/0:28,0:27:78.22:0,78,891	0/0:12,1:13:11.65:0,12,377
chr10	22206091	.	AAACAAAC	A	2704.56	PASS	AB=0.995;AC=13;AF=0.232;AN=56;BaseQRankSum=-7.628;DP=581;FS=6.325;HRun=0;HaplotypeScore=165.1011;InbreedingCoeff=0.2792;MQ=58.30;MQ0=3;MQRankSum=0.634;QD=11.71;ReadPosRankSum=-5.637;VQSLOD=-0.5558;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:23:16.85:0,17,455	0/1:12,0:12:19.20:19,0,617	0/0:27,0:23:51.17:0,51,971	0/0:24,0:20:47.96:0,48,776	0/0:23,0:23:39.97:0,40,869	0/0:22,0:22:33.11:0,33,926	0/0:15,0:15:6.02:0,6,144	0/1:38,0:38:99:247,0,870	0/0:15,0:15:39.10:0,39,975	1/1:0,17:17:44.91:895,45,0	1/1:1,21:22:47.98:942,48,0	0/0:25,0:25:21.05:0,21,529	0/0:20,0:20:20.82:0,21,511	0/0:19,0:19:24.02:0,24,434	0/0:22,0:22:36.11:0,36,952	1/1:0,13:13:17.77:473,18,0	0/0:30,0:30:51.15:0,51,1359	0/1:13,0:13:11.31:11,0,434	0/1:28,0:27:99:103,0,1153	0/1:29,0:29:36.46:36,0,1146	0/0:14,0:14:18.06:0,18,377	0/0:13,0:13:14.51:0,15,218	0/0:8,0:8:12.03:0,12,185	0/0:20,0:20:20.19:0,20,504	0/0:17,0:17:30.07:0,30,722	0/1:29,1:30:99:116,0,1644	0/1:29,0:29:31.87:32,0,1787	0/0:12,0:12:31.93:0,32,954
chr10	22206098	.	C	CAAACAAACAAACA	14495.76	PASS	AB=0.682;AC=44;AF=0.786;AN=56;BaseQRankSum=-6.796;DP=612;FS=3.917;HRun=0;HaplotypeScore=183.3587;InbreedingCoeff=0.3355;MQ=61.97;MQ0=2;MQRankSum=-1.647;QD=26.40;ReadPosRankSum=-0.742;VQSLOD=4.0865;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:3,0:25:15.05:496,15,0	1/1:1,0:14:32.34:309,32,0	0/0:25,0:22:45.14:0,45,714	0/0:23,0:20:33.82:0,34,397	1/1:2,0:28:57.15:1310,57,0	1/1:0,18:24:33.11:2150,33,0	1/1:2,10:21:6.02:267,6,0	1/1:12,0:36:91.11:1191,91,0	1/1:1,0:15:32.17:185,32,0	0/1:18,0:18:99:112,0,579	0/1:23,0:23:39.71:40,0,678	1/1:1,15:30:18.06:1173,18,0	1/1:0,12:19:17.96:1172,18,0	1/1:2,10:19:12.04:782,12,0	1/1:0,0:22:32.17:185,32,0	0/0:14,0:14:17.80:0,18,491	1/1:2,0:32:45.85:295,46,0	0/1:2,0:14:5.80:135,0,6	1/1:5,0:30:66.70:791,67,0	1/1:3,0:28:65.27:661,65,0	1/1:2,0:18:11.87:143,12,0	1/1:0,11:15:18.02:522,18,0	1/1:0,0:7:6.41:129,6,0	1/1:3,0:25:21.07:686,21,0	1/1:1,14:20:24.08:1564,24,0	0/1:5,0:27:99:113,0,1056	0/1:0,0:26:45.75:46,0,1158	0/1:0,0:13:41.79:42,0,451
chr10	22206434	.	TTCTCTCTC	T	740.41	PASS	AB=1.000;AC=25;AF=0.595;AN=42;BaseQRankSum=3.335;DP=574;FS=2.937;HRun=0;HaplotypeScore=140.3166;InbreedingCoeff=0.4694;MQ=78.39;MQ0=12;MQRankSum=0.763;QD=2.96;ReadPosRankSum=1.642;VQSLOD=2.1556;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/0:6,0:6:6.01:0,6,87	./.	0/0:53,0:31:0:0,0,1	./.	1/1:34,0:32:5.50:83,6,0	1/1:12,0:12:6:85,6,0	0/0:36,0:35:4.52:0,5,11	1/1:15,0:15:3.01:56,3,0	1/1:28,0:28:1.03:24,1,0	1/1:19,0:19:3.01:63,3,0	./.	1/1:17,4:21:3.01:74,3,0	0/1:18,0:18:8.40:9,0,8	1/1:10,0:14:12.04:223,12,0	1/1:22,2:24:6.01:130,6,0	0/0:17,0:18:9.03:0,9,128	0/0:13,0:13:3.01:0,3,61	./.	1/1:18,0:21:2.22:11,2,0	0/0:24,0:24:12.04:0,12,191	./.	1/1:10,0:10:2.68:11,3,0	1/1:12,0:12:5.99:49,6,0	1/1:20,0:19:3.01:63,3,0	0/0:12,0:12:12.04:0,12,337	0/0:24,0:24:24.55:0,25,572	./.
chr10	22206694	.	A	AAC	26840.21	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-9.653;DP=613;FS=2.830;HRun=0;HaplotypeScore=55.2339;InbreedingCoeff=0.9964;MQ=90.74;MQ0=10;MQRankSum=-10.738;QD=47.59;ReadPosRankSum=6.639;VQSLOD=6.1461;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,25:25:66.22:1175,66,0	1/1:0,8:8:24.08:440,24,0	0/0:22,0:22:60.17:0,60,832	0/0:27,0:27:56.21:0,56,859	1/1:0,33:34:96.33:1724,96,0	1/1:1,41:39:99:1923,105,0	1/1:1,17:18:39.13:714,39,0	1/1:1,37:38:99:1956,114,0	1/1:0,25:25:66.23:1209,66,0	1/1:2,23:26:69.24:1264,69,0	1/1:3,22:23:54.18:946,54,0	1/1:0,14:14:36.12:660,36,0	1/1:0,19:18:54.19:989,54,0	1/1:2,16:18:45.15:818,45,0	1/1:0,22:21:54.19:989,54,0	1/1:1,24:25:66.23:1209,66,0	1/1:3,15:17:39.13:705,39,0	1/1:0,11:11:30.10:549,30,0	1/1:1,14:15:42.14:768,42,0	1/1:0,24:23:69.24:1247,69,0	1/1:0,21:21:57.20:1044,57,0	1/1:1,20:21:57.09:986,57,0	1/1:0,21:21:57.20:1044,57,0	1/1:0,18:18:48.16:879,48,0	1/1:0,16:17:42.14:770,42,0	1/1:2,28:29:84.26:1457,84,0	1/1:0,20:20:54.19:988,54,0	1/1:0,7:7:21.07:385,21,0
chr10	22207053	.	A	AG	13246.08	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=1.986;DP=595;FS=16.871;HRun=8;HaplotypeScore=93.7970;InbreedingCoeff=0.9452;MQ=80.39;MQ0=0;MQRankSum=-2.146;QD=27.31;ReadPosRankSum=2.012;VQSLOD=3.5881;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:66.03:0,66,604	1/1:4,4:8:9.03:104,9,0	0/0:14,0:14:26.98:0,27,242	0/0:16,0:16:29.70:0,30,247	1/1:9,19:28:38.69:684,39,0	1/1:2,14:16:42.12:485,42,0	1/1:3,19:22:57.17:658,57,0	1/1:5,13:18:11.79:361,12,0	1/1:4,22:26:63.09:742,63,0	1/1:7,17:24:54.16:618,54,0	1/1:4,14:19:45.09:504,45,0	1/1:6,27:33:57.08:888,57,0	1/1:3,21:24:66.19:755,66,0	1/1:2,24:26:75.22:857,75,0	1/1:1,31:33:90.10:1018,90,0	1/1:1,19:20:57.17:658,57,0	1/1:3,21:23:57.17:658,57,0	1/1:3,10:13:30.09:346,30,0	1/1:5,12:17:36.08:402,36,0	1/1:3,21:24:57.17:658,57,0	1/1:2,23:25:51.15:588,51,0	1/1:6,21:27:60.18:691,60,0	1/1:5,13:18:32.82:360,33,0	1/1:3,18:21:51.15:589,51,0	1/1:1,18:19:54.16:622,54,0	0/0:25,0:25:66.03:0,66,604	0/0:27,0:27:72.03:0,72,659	0/0:3,0:3:3:0,3,27
chr10	22208343	.	C	CA	2158.49	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=3.344;DP=668;FS=2.173;HRun=7;HaplotypeScore=65.5697;InbreedingCoeff=0.9967;MQ=75.15;MQ0=0;MQRankSum=-0.294;QD=28.40;ReadPosRankSum=2.398;VQSLOD=4.5068;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:87.12:0,87,833	0/0:8,0:8:21.03:0,21,203	0/0:14,0:14:41.52:0,42,374	0/0:12,0:12:27.01:0,27,251	0/0:29,0:29:81.13:0,81,782	0/0:22,0:22:60.06:0,60,568	0/0:20,0:20:57.09:0,57,550	0/0:35,0:35:99:0,102,967	0/0:22,0:22:63.06:0,63,596	1/1:3,21:24:63.19:761,63,0	1/1:3,24:27:75.23:902,75,0	0/0:21,0:21:39.05:0,39,377	0/0:32,0:32:87.14:0,87,840	0/0:18,1:19:21.89:0,22,434	0/0:28,0:28:75.05:0,75,704	1/1:5,19:25:31.07:638,31,0	0/0:30,0:30:89.88:0,90,852	0/0:28,0:27:75.10:0,75,717	0/0:14,0:14:39.05:0,39,372	0/0:29,0:29:84.12:0,84,805	0/0:16,0:16:42.07:0,42,405	0/0:20,0:20:51.08:0,51,492	0/0:33,0:33:84.12:0,84,811	0/0:16,0:16:39.06:0,39,377	0/0:32,0:32:87.11:0,87,832	0/0:26,1:27:35.87:0,36,630	0/0:30,0:28:78.10:0,78,742	0/0:24,0:24:72.12:0,72,695
chr10	22208552	.	G	GTC	1496.59	PASS	AB=0.813;AC=8;AF=0.143;AN=56;BaseQRankSum=1.783;DP=808;FS=8.551;HRun=0;HaplotypeScore=113.1216;InbreedingCoeff=0.8174;MQ=55.46;MQ0=50;MQRankSum=0.393;QD=9.78;ReadPosRankSum=0.763;VQSLOD=2.4742;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:47:44.93:0,45,274	0/0:6,0:6:12.04:0,12,142	0/1:80,0:12:0:0,0,0	0/0:126,0:31:19.85:0,20,147	0/0:17,0:16:24.07:0,24,278	0/0:27,0:27:56.88:0,57,633	0/0:28,0:28:51.15:0,51,604	0/0:40,0:37:53.88:0,54,580	0/0:21,0:20:48.13:0,48,556	0/1:8,12:19:2.88:475,0,3	1/1:5,3:8:9:135,9,0	0/0:24,0:24:60.18:0,60,714	0/0:28,0:28:57.15:0,57,655	0/0:27,0:27:56.20:0,56,650	1/1:6,17:22:34.36:528,34,0	1/1:8,13:20:33.09:502,33,0	0/0:19,0:19:20.17:0,20,380	0/0:22,0:21:33.37:0,33,456	0/0:22,0:19:36.08:0,36,403	0/0:17,0:16:14.31:0,14,166	0/0:39,0:41:73.59:0,74,808	0/0:20,0:20:33.09:0,33,381	0/0:13,0:12:16.23:0,16,180	0/0:27,0:28:64.06:0,64,720	0/0:16,0:16:33.10:0,33,386	0/0:25,1:27:12.29:0,12,593	0/0:22,0:23:56.72:0,57,620	0/0:13,0:13:27.08:0,27,320
chr10	22208643	.	CCTT	C	1014.36	PASS	AB=0.826;AC=6;AF=0.107;AN=56;BaseQRankSum=5.317;DP=620;FS=9.772;HRun=0;HaplotypeScore=75.3701;InbreedingCoeff=0.5428;MQ=46.83;MQ0=36;MQRankSum=2.101;QD=17.49;ReadPosRankSum=0.056;VQSLOD=2.5772;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:90.30:0,90,1977	0/0:3,0:3:9.03:0,9,166	0/0:57,0:9:4.32:0,4,117	0/0:87,0:6:9.46:0,9,143	0/0:9,0:9:24.06:0,24,412	0/0:23,0:22:60.20:0,60,1268	0/0:27,0:27:61.33:0,61,1239	0/0:32,0:28:62.69:0,63,981	0/0:16,0:16:48.13:0,48,1003	1/1:5,6:10:24.08:385,24,0	1/1:0,11:11:21:324,21,0	0/0:17,0:17:47.99:0,48,800	0/0:23,0:23:56.56:0,57,1098	0/0:17,0:17:50.59:0,51,919	0/0:15,0:15:45.08:0,45,923	0/1:7,8:13:19.47:422,0,19	0/0:28,0:27:67.18:0,67,1473	0/0:17,0:17:44.91:0,45,936	0/0:13,0:9:27.05:0,27,433	0/0:4,0:4:9.03:0,9,206	0/0:42,0:39:84.26:0,84,2002	0/0:10,0:10:27.90:0,28,526	0/0:14,0:14:40.86:0,41,571	0/0:29,0:29:72.06:0,72,1485	0/0:21,0:20:59.15:0,59,1158	0/1:21,0:20:16.90:17,0,907	0/0:20,0:20:57.12:0,57,1104	0/0:4,0:3:9:0,9,124
chr10	22208749	.	C	CCT	832.77	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-1.526;DP=600;FS=1.826;HRun=0;HaplotypeScore=101.6954;InbreedingCoeff=0.8661;MQ=49.62;MQ0=27;MQRankSum=-1.331;QD=23.13;ReadPosRankSum=-0.608;VQSLOD=3.9067;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:57.13:0,57,701	0/0:5,0:4:12.04:0,12,154	0/0:79,0:16:23.67:0,24,264	0/0:108,0:14:26.96:0,27,299	0/0:14,0:14:36.12:0,36,463	0/0:13,0:13:26.78:0,27,286	0/0:31,0:31:87.19:0,87,1087	0/0:17,0:15:26.14:0,26,345	0/0:14,0:14:30.08:0,30,370	1/1:9,8:14:6.27:381,6,0	1/1:4,2:5:9.03:142,9,0	0/0:14,0:14:33.10:0,33,415	0/0:15,0:15:36.08:0,36,433	0/0:10,0:10:24.08:0,24,309	0/0:11,0:11:25.63:0,26,312	1/1:3,10:13:10.24:432,10,0	0/0:20,0:20:41.67:0,42,579	0/0:16,0:16:34.58:0,35,378	0/0:19,0:18:36.11:0,36,449	0/0:12,0:12:26.28:0,26,301	0/0:28,0:26:57.11:0,57,674	0/0:18,0:18:46.32:0,46,523	0/0:14,0:12:24.96:0,25,310	0/0:31,0:31:63:0,63,796	0/0:7,0:7:20.57:0,21,220	0/0:23,1:23:6.52:0,7,599	0/0:8,0:8:17.91:0,18,192	0/0:7,0:7:15.05:0,15,193
chr10	22208774	.	CCT	C	3053.37	PASS	AB=0.915;AC=22;AF=0.393;AN=56;BaseQRankSum=7.849;DP=638;FS=10.936;HRun=0;HaplotypeScore=92.7573;InbreedingCoeff=0.5469;MQ=49.43;MQ0=31;MQRankSum=-2.237;QD=11.31;ReadPosRankSum=2.469;VQSLOD=2.8972;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,23:25:63.20:806,63,0	1/1:2,4:6:12.04:154,12,0	0/1:84,1:18:10.77:11,0,280	0/0:118,0:19:15.42:0,15,245	0/0:24,0:22:60.21:0,60,1004	0/0:18,0:18:38.44:0,38,638	0/0:31,0:31:73.36:0,73,1238	1/1:8,10:14:20.54:317,21,0	1/1:4,8:12:21.07:270,21,0	0/0:20,0:19:30.93:0,31,654	0/0:7,0:6:12.04:0,12,188	0/0:16,0:16:24.97:0,25,394	0/0:17,0:17:38.49:0,38,608	0/0:12,0:11:27.09:0,27,446	0/0:9,0:8:11.82:0,12,244	0/1:17,0:17:27.01:27,0,363	0/1:6,12:17:10.32:282,0,10	1/1:2,8:10:12.79:224,13,0	1/1:4,11:15:21.01:250,21,0	1/1:3,9:13:24.08:304,24,0	1/1:4,17:19:42.14:541,42,0	0/0:17,0:17:18.15:0,18,621	0/0:18,0:17:46.40:0,46,753	0/0:33,0:33:78.26:0,78,1314	0/1:7,0:7:11.83:12,0,185	0/0:27,0:26:40.43:0,40,1077	0/1:11,0:11:46.26:46,0,317	0/1:8,1:9:14.53:15,0,330
chr10	22208819	.	TCTCTC	T	935.85	PASS	AB=0.989;AC=10;AF=0.179;AN=56;BaseQRankSum=6.267;DP=555;FS=0.745;HRun=0;HaplotypeScore=102.9887;InbreedingCoeff=0.4519;MQ=42.57;MQ0=40;MQRankSum=-4.751;QD=10.63;ReadPosRankSum=-0.991;VQSLOD=2.3651;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:16:33.06:0,33,871	0/0:2,0:2:6.02:0,6,164	0/0:101,0:13:37.91:0,38,736	0/0:113,0:17:24.37:0,24,442	0/0:21,0:21:37.48:0,37,1481	0/0:17,0:16:27.49:0,27,707	0/0:21,0:21:50.88:0,51,1470	0/1:16,0:14:12.18:12,0,747	0/0:12,0:12:16.42:0,16,806	1/1:4,9:12:27.09:497,27,0	1/1:1,3:4:9.03:186,9,0	0/0:11,0:11:23.12:0,23,633	0/0:16,0:16:7.70:0,8,1037	0/0:10,0:10:27.09:0,27,807	0/0:6,0:6:18.06:0,18,520	1/1:4,4:8:20.93:360,21,0	0/1:8,0:7:14.24:14,0,353	0/0:7,0:7:15.05:0,15,450	0/0:11,0:11:30.10:0,30,799	0/0:10,0:10:24.06:0,24,728	0/0:12,0:10:27.07:0,27,751	0/1:18,0:18:4.75:5,0,1136	0/0:23,0:23:26.11:0,26,1663	0/0:24,0:24:48.54:0,49,1508	0/0:12,0:13:0.95:0,1,787	0/1:20,1:21:14.80:15,0,1038	0/0:10,0:10:21.05:0,21,564	0/0:8,0:8:21.07:0,21,636
chr10	22208823	.	TC	T	186.17	PASS	AB=0.938;AC=8;AF=0.143;AN=56;BaseQRankSum=7.963;DP=534;FS=0.000;HRun=2;HaplotypeScore=81.3783;InbreedingCoeff=0.6306;MQ=42.43;MQ0=37;MQRankSum=-3.673;QD=4.23;ReadPosRankSum=-0.639;VQSLOD=0.0991;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:14:33.11:0,33,485	0/0:2,0:2:6.02:0,6,90	0/0:98,3:16:42.13:0,42,569	0/0:106,0:17:22.21:0,22,283	0/0:22,0:22:42.56:0,43,746	0/0:16,0:15:36.03:0,36,458	0/0:22,0:22:54.10:0,54,759	0/1:12,2:13:30.47:30,0,367	0/0:12,0:12:14.11:0,14,388	1/1:11,1:11:22.88:151,23,0	1/1:3,0:3:8.16:40,8,0	0/0:9,1:10:27.08:0,27,382	0/0:13,1:14:24.07:0,24,524	0/0:10,0:10:27.09:0,27,404	0/0:6,0:6:18.06:0,18,269	1/1:7,0:7:19.01:104,19,0	0/0:7,1:7:9.62:0,10,219	0/0:7,0:7:15.05:0,15,225	0/0:11,0:11:30.10:0,30,440	0/0:10,0:10:24.08:0,24,359	0/0:12,0:10:27.07:0,27,383	0/0:17,1:18:2.64:0,3,560	0/0:25,0:25:59.87:0,60,892	0/0:21,0:21:56.37:0,56,802	0/0:13,0:13:24.89:0,25,400	0/0:20,0:20:31.55:0,32,584	0/1:8,0:8:3.66:4,0,286	0/0:8,0:8:21.07:0,21,315
chr10	22209114	.	C	CT	216.85	PASS	AB=0.972;AC=19;AF=0.432;AN=44;BaseQRankSum=4.454;DP=172;FS=6.069;HRun=2;HaplotypeScore=49.7187;InbreedingCoeff=0.0062;MQ=25.95;MQ0=63;MQRankSum=-0.226;QD=2.58;ReadPosRankSum=1.859;VQSLOD=-0.4886;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:11,0:6:8.86:16,0,9	./.	./.	./.	0/1:10,0:10:12.28:12,0,27	./.	0/0:5,2:4:2.86:0,3,15	0/0:4,0:2:5.86:0,6,34	0/1:4,0:3:16.27:20,0,16	0/1:4,2:4:17.62:88,0,18	1/1:6,0:5:3.84:21,4,0	0/1:5,0:5:31.55:32,0,32	0/1:6,0:6:4.55:5,0,62	1/1:4,0:3:2.35:26,2,0	./.	1/1:3,2:4:5.97:52,6,0	0/0:5,0:3:6.01:0,6,57	0/0:2,0:1:3:0,3,27	1/1:5,1:4:3.48:44,3,0	1/1:3,1:1:2.97:20,3,0	./.	0/1:5,0:4:5.66:6,0,29	0/1:8,0:8:4.14:4,0,83	0/1:3,0:2:0:0,0,0	0/0:7,0:4:3.09:0,3,17	0/0:14,0:12:2.77:0,3,231	0/0:6,0:6:13.85:0,14,146	0/0:6,0:4:12.03:0,12,136
chr10	22209446	.	ATT	A	2907.16	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-5.604;DP=542;FS=0.868;HRun=14;HaplotypeScore=84.6535;InbreedingCoeff=0.9256;MQ=71.09;MQ0=3;MQRankSum=1.493;QD=15.38;ReadPosRankSum=4.712;VQSLOD=3.0108;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,21:26:53.72:484,54,0	1/1:0,3:3:9.01:83,9,0	0/0:18,0:14:18.06:0,18,229	0/0:14,0:9:12.03:0,12,132	1/1:5,18:25:32.28:383,32,0	0/0:9,0:25:48.09:0,48,494	0/0:17,0:28:65.47:0,65,630	1/1:11,16:29:25.98:434,26,0	1/1:5,12:16:17.93:167,18,0	0/0:5,0:15:42.03:0,42,433	0/0:7,0:20:40.97:0,41,376	0/0:4,0:22:21:0,21,200	0/0:21,0:24:68.33:0,68,664	0/0:8,0:21:32.36:0,32,323	0/0:8,0:27:36:0,36,361	0/0:10,0:24:45.55:0,46,485	1/1:2,13:17:32.45:274,32,0	1/1:3,6:10:8.81:122,9,0	1/1:4,13:18:38.70:344,39,0	1/1:6,19:25:9.75:441,10,0	1/1:1,17:18:42.03:389,42,0	0/0:1,0:13:32.70:0,33,311	0/0:1,0:18:34.45:0,34,336	0/0:4,0:21:33.05:0,33,329	0/0:3,0:8:6.01:0,6,57	0/0:19,0:22:53.55:0,54,647	0/0:30,0:31:88.52:0,89,1105	0/0:0,0:1:3:0,3,29
chr10	22210308	.	C	CG	2349.45	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-4.744;DP=666;FS=2.300;HRun=3;HaplotypeScore=74.0370;InbreedingCoeff=0.9970;MQ=78.04;MQ0=0;MQRankSum=-2.845;QD=32.63;ReadPosRankSum=0.039;VQSLOD=3.8444;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:84.25:0,84,997	0/0:7,0:7:18.01:0,18,199	0/0:22,0:22:57.14:0,57,649	0/0:28,0:28:72.20:0,72,831	0/0:32,0:32:78.20:0,78,916	0/0:23,0:23:69.17:0,69,810	0/0:16,0:16:45.12:0,45,528	0/0:33,0:33:75.21:0,75,886	0/0:15,0:15:42.13:0,42,503	1/1:2,26:28:81.27:1124,81,0	1/1:0,17:17:45.15:624,45,0	0/0:33,0:33:81.19:0,81,942	0/0:32,0:32:81.17:0,81,938	0/0:25,0:25:72.20:0,72,840	0/0:28,0:28:75.17:0,75,871	1/1:4,23:27:56.94:745,57,0	0/0:32,0:32:81.21:0,81,953	0/0:12,0:12:36.11:0,36,430	0/0:23,0:23:66.17:0,66,776	0/0:27,0:27:72.22:0,72,861	0/0:18,0:18:51.16:0,51,611	0/0:20,0:20:51.15:0,51,605	0/0:23,0:23:63.15:0,63,737	0/0:19,0:19:47.94:0,48,552	0/0:16,0:16:39.12:0,39,466	0/0:31,0:31:87.27:0,87,1039	0/0:32,0:32:90.08:0,90,1011	0/0:15,0:15:45.14:0,45,539
chr10	22211426	.	T	TA	6606.45	PASS	AB=0.588;AC=46;AF=0.852;AN=54;BaseQRankSum=-1.951;DP=352;FS=15.391;HRun=9;HaplotypeScore=36.6913;InbreedingCoeff=0.6174;MQ=52.29;MQ0=33;MQRankSum=-2.268;QD=20.84;ReadPosRankSum=1.593;VQSLOD=3.6879;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,23:27:54.15:597,54,0	./.	0/0:14,0:7:10.50:0,10,79	0/0:6,0:3:2.99:0,3,26	0/1:3,7:9:1.86:208,0,2	1/1:6,9:12:24.06:265,24,0	1/1:2,8:11:23.90:245,24,0	1/1:11,17:27:51.11:547,51,0	0/1:3,7:10:1.99:208,0,2	1/1:13,3:12:33.09:365,33,0	1/1:3,0:2:6.02:66,6,0	1/1:3,5:7:5.98:53,6,0	1/1:1,10:11:27.07:299,27,0	1/1:5,6:9:23.73:227,24,0	0/0:15,0:12:26.97:0,27,234	1/1:5,9:14:36.10:396,36,0	1/1:5,25:26:69.19:763,69,0	1/1:3,6:7:18.05:199,18,0	1/1:7,11:17:36.10:398,36,0	1/1:2,7:7:21.06:232,21,0	1/1:0,3:3:9.02:100,9,0	1/1:2,9:10:24.06:265,24,0	1/1:0,7:7:18.05:199,18,0	1/1:3,11:13:10.04:339,10,0	1/1:1,9:10:26.91:279,27,0	1/1:4,0:19:45.45:227,45,0	1/1:1,0:9:19.89:99,20,0	1/1:4,0:3:5.68:29,6,0
chr10	22211439	.	TA	T	717.72	PASS	AB=0.941;AC=7;AF=0.125;AN=56;BaseQRankSum=2.963;DP=353;FS=8.853;HRun=9;HaplotypeScore=59.6110;InbreedingCoeff=0.7206;MQ=58.52;MQ0=15;MQRankSum=-2.186;QD=13.80;ReadPosRankSum=1.293;VQSLOD=2.9380;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:25:57.17:0,57,657	0/0:1,0:1:3.01:0,3,35	0/1:15,1:9:3.92:4,0,192	0/0:8,0:5:11.97:0,12,113	0/0:1,0:11:25.57:0,26,130	0/0:11,0:9:24.07:0,24,277	0/0:14,0:14:33.08:0,33,370	0/0:26,0:25:69.15:0,69,768	0/0:8,0:8:21.06:0,21,242	1/1:12,5:14:39.01:357,39,0	1/1:2,0:2:6:55,6,0	0/0:8,0:7:12.03:0,12,134	0/0:11,0:11:27.06:0,27,301	0/0:14,0:12:33.10:0,33,381	0/0:18,0:16:48.14:0,48,554	1/1:5,12:17:48.03:439,48,0	0/0:28,0:27:78.21:0,78,888	0/0:8,0:7:21.06:0,21,242	0/0:14,0:14:5.63:0,6,318	0/0:7,0:7:21.02:0,21,227	0/0:4,0:4:12.04:0,12,139	0/0:11,0:11:26.99:0,27,292	0/0:8,0:8:21.06:0,21,240	0/0:15,0:15:42.12:0,42,481	0/0:14,0:13:36.11:0,36,415	0/0:19,0:18:48.14:0,48,553	0/0:12,0:12:33.08:0,33,370	0/0:4,0:4:9.03:0,9,104
chr10	22212117	.	TACACACACACAC	T	566.34	PASS	AB=0.925;AC=18;AF=0.375;AN=48;BaseQRankSum=2.057;DP=436;FS=4.319;HRun=0;HaplotypeScore=125.5942;InbreedingCoeff=0.4575;MQ=67.03;MQ0=22;MQRankSum=-0.643;QD=3.83;ReadPosRankSum=0.643;VQSLOD=2.4218;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:23:1.08:2,1,0	0/1:4,0:4:13.02:13,0,15	./.	./.	0/0:20,0:19:5.99:0,6,48	./.	0/0:18,0:18:3.01:0,3,72	0/0:21,0:20:1.25:0,1,3	0/0:12,0:11:2.99:0,3,24	./.	1/1:10,0:10:2.99:24,3,0	0/0:13,0:13:12.02:0,12,243	0/0:8,0:8:6.02:0,6,109	0/0:13,0:13:9.03:0,9,259	1/1:20,0:20:3.46:25,3,0	1/1:14,0:14:5.99:50,6,0	1/1:21,1:24:15.03:277,15,0	0/0:9,0:8:3.01:0,3,39	1/1:13,0:13:3.01:47,3,0	1/1:13,0:13:3.01:72,3,0	0/0:23,0:20:5.97:0,6,46	0/0:10,0:10:12.02:0,12,249	0/0:13,0:12:15.02:0,15,273	0/0:23,0:20:15.01:0,15,263	0/0:14,0:13:21.06:0,21,518	0/0:16,0:15:5.33:0,5,27	0/1:14,3:16:1.14:194,0,1	1/1:8,0:8:1.82:5,2,0
chr10	22212569	.	GCA	G	10217.85	PASS	AB=0.643;AC=48;AF=0.857;AN=56;BaseQRankSum=4.273;DP=687;FS=2.148;HRun=0;HaplotypeScore=100.7966;InbreedingCoeff=0.6882;MQ=60.13;MQ0=20;MQRankSum=2.739;QD=18.08;ReadPosRankSum=2.447;VQSLOD=5.1532;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:40:36.93:182,37,0	1/1:2,8:10:15.04:177,15,0	0/0:50,0:16:15.03:0,15,206	0/0:42,0:15:10.75:0,11,156	0/0:29,1:30:36.86:0,37,1049	1/1:0,18:17:36.11:424,36,0	0/1:6,13:19:6.53:352,0,7	1/1:20,14:33:36.55:410,37,0	1/1:6,14:20:23.82:282,24,0	1/1:7,23:32:77.39:810,77,0	1/1:6,16:23:18.44:425,18,0	1/1:7,23:31:63.02:720,63,0	1/1:7,26:33:65.61:730,66,0	1/1:4,19:23:42.12:493,42,0	1/1:3,19:22:33.10:388,33,0	1/1:8,17:25:35.94:402,36,0	1/1:2,11:14:26.74:275,27,0	0/1:5,3:9:17.92:70,0,18	1/1:4,6:10:9.95:189,10,0	1/1:7,19:27:38.95:438,39,0	1/1:9,12:19:31.58:344,32,0	1/1:8,15:22:33.10:389,33,0	1/1:12,18:30:47.94:538,48,0	1/1:10,11:21:33.03:372,33,0	1/1:5,17:26:50.31:493,50,0	1/1:6,11:17:35.94:403,36,0	1/1:6,21:28:68.87:770,69,0	1/1:0,5:5:12.04:141,12,0
chr10	22215620	.	G	GGT	1796.96	PASS	AB=0.799;AC=30;AF=0.625;AN=48;BaseQRankSum=-5.833;DP=552;FS=14.434;HRun=0;HaplotypeScore=92.7750;InbreedingCoeff=0.3835;MQ=63.64;MQ0=18;MQRankSum=6.063;QD=5.56;ReadPosRankSum=-3.057;VQSLOD=1.0841;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:33:2.84:0,3,14	0/0:5,0:11:11.32:0,11,55	./.	./.	1/1:11,0:18:9:78,9,0	1/1:27,0:26:18:179,18,0	0/1:19,5:25:31.42:118,0,31	./.	0/0:11,0:19:14.20:0,14,70	1/1:12,0:16:11.60:107,12,0	1/1:27,0:31:23.73:214,24,0	1/1:9,5:13:9.03:133,9,0	0/1:14,4:18:23.29:80,0,23	0/1:17,6:25:49.60:118,0,50	1/1:11,0:13:8.97:82,9,0	1/1:12,0:12:6:52,6,0	0/0:14,0:17:5.60:0,6,27	0/0:10,0:13:8.35:0,8,42	0/0:19,0:19:1.40:0,1,5	0/0:12,0:19:19.75:0,20,88	./.	1/1:12,0:13:3.01:43,3,0	1/1:12,2:13:3.01:44,3,0	1/1:7,10:18:24.08:355,24,0	1/1:16,0:18:16.87:112,17,0	1/1:19,0:19:6.02:82,6,0	0/1:20,5:25:49.62:118,0,50	1/1:9,0:8:3.01:44,3,0
chr10	22216221	.	A	AT	636.06	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=-5.633;DP=435;FS=2.922;HRun=9;HaplotypeScore=42.4318;InbreedingCoeff=0.6773;MQ=72.26;MQ0=1;MQRankSum=0.746;QD=15.90;ReadPosRankSum=-1.005;VQSLOD=3.1506;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:41.96:0,42,359	0/0:8,0:8:24:0,24,208	0/0:11,0:11:14.96:0,15,123	0/1:11,0:8:3.95:4,0,31	1/1:6,23:29:66.18:730,66,0	0/0:15,0:15:44.99:0,45,391	0/0:9,0:9:26.99:0,27,234	0/0:23,0:23:47.97:0,48,416	0/0:11,0:11:26.99:0,27,234	0/0:18,0:18:44.98:0,45,388	0/0:31,0:31:74.97:0,75,651	0/0:11,0:11:32.96:0,33,278	0/0:12,0:12:35.98:0,36,309	0/0:17,0:17:47.97:0,48,413	0/0:12,0:12:29.99:0,30,260	0/0:9,0:9:20.99:0,21,182	0/0:16,0:16:35.99:0,36,312	0/0:16,0:16:38.97:0,39,338	0/0:18,0:19:50.02:0,50,423	0/0:24,0:24:56.97:0,57,495	0/0:8,0:8:14.99:0,15,130	0/0:7,0:7:11.99:0,12,104	0/0:22,0:22:56.99:0,57,494	0/0:8,0:8:14.98:0,15,130	0/0:29,0:29:83.95:0,84,722	0/0:15,0:15:35.98:0,36,313	0/0:16,0:16:44.99:0,45,391	0/0:13,0:13:35.99:0,36,312
chr10	22218989	.	GGC	G	5408.59	PASS	AB=0.548;AC=49;AF=0.907;AN=54;BaseQRankSum=0.225;DP=429;FS=0.842;HRun=0;HaplotypeScore=87.8711;InbreedingCoeff=0.5279;MQ=72.09;MQ0=5;MQRankSum=-2.043;QD=14.01;ReadPosRankSum=4.282;VQSLOD=4.4796;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:15:34.31:292,34,0	1/1:12,0:11:3:27,3,0	0/0:9,0:6:10.17:0,10,107	0/0:23,0:18:36.63:0,37,292	1/1:19,1:20:28.28:374,28,0	1/1:2,17:19:9.50:132,10,0	1/1:19,2:21:50.90:456,51,0	1/1:2,20:22:56.98:497,57,0	1/1:6,0:6:8.36:75,8,0	1/1:11,0:11:33.04:311,33,0	1/1:19,2:21:5.79:37,6,0	1/1:14,0:14:38.94:327,39,0	0/1:3,14:17:22.66:31,0,23	1/1:15,0:15:35.94:297,36,0	1/1:23,0:23:20.61:141,21,0	1/1:10,1:11:14.88:113,15,0	1/1:10,1:11:23.64:199,24,0	1/1:10,0:10:29.90:244,30,0	1/1:2,14:15:44.65:378,45,0	1/1:18,1:19:2.86:19,3,0	1/1:4,19:22:9.01:100,9,0	./.	1/1:11,0:10:17.98:149,18,0	1/1:11,2:13:6.02:87,6,0	1/1:7,0:7:11.99:103,12,0	1/1:1,22:23:47:537,47,0	1/1:13,1:14:15.77:269,16,0	1/1:12,0:11:11.05:214,11,0
chr10	22218990	.	GCGCTCTCT	G	4430.05	PASS	AB=0.939;AC=32;AF=0.593;AN=54;BaseQRankSum=-4.727;DP=435;FS=2.804;HRun=0;HaplotypeScore=124.9442;InbreedingCoeff=0.2435;MQ=70.52;MQ0=7;MQRankSum=0.558;QD=14.52;ReadPosRankSum=2.741;VQSLOD=3.6552;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:15:26.74:220,27,0	0/0:2,0:12:2.55:0,3,11	0/0:9,0:6:10.17:0,10,107	0/0:22,0:17:39.53:0,40,335	0/1:18,0:20:99:218,0,312	0/0:21,0:21:2.06:0,2,237	0/1:19,0:21:99:253,0,104	1/1:22,0:22:20.98:458,21,0	0/1:4,0:6:1.06:41,0,1	1/1:9,1:11:33.06:414,33,0	1/1:2,17:21:6.16:73,6,0	1/1:15,0:14:36.83:303,37,0	0/0:17,0:17:12.98:0,13,306	1/1:15,0:15:33.83:274,34,0	1/1:1,0:22:20.70:288,21,0	1/1:2,9:11:2.55:251,3,0	0/1:11,0:11:53.78:54,0,132	1/1:7,1:10:18.70:242,19,0	0/1:16,0:15:6.74:289,0,7	1/1:2,0:19:2.96:19,3,0	0/0:23,0:22:4.63:0,5,63	./.	1/1:10,0:10:15.45:125,15,0	0/0:2,0:12:6.02:0,6,91	1/1:7,0:7:11.99:103,12,0	0/1:23,0:23:87.41:426,0,87	0/1:15,0:16:99:177,0,329	0/1:12,0:11:72.03:202,0,72
chr10	22219042	.	T	TC	401.04	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.111;DP=546;FS=18.004;HRun=6;HaplotypeScore=87.0220;InbreedingCoeff=0.9583;MQ=57.31;MQ0=22;MQRankSum=3.356;QD=20.05;ReadPosRankSum=-0.353;VQSLOD=2.1033;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:48.47:0,48,465	0/0:6,0:6:14.93:0,15,139	0/0:33,0:9:17.60:0,18,141	0/0:46,0:14:22.41:0,22,224	1/1:2,18:20:44.93:496,45,0	0/0:23,0:23:55.49:0,55,515	0/0:24,0:24:59.80:0,60,571	0/0:26,0:26:60.09:0,60,592	0/0:11,0:11:27.05:0,27,270	0/0:18,0:18:51.09:0,51,509	0/0:17,0:17:32.66:0,33,331	0/0:13,0:13:27.06:0,27,275	0/0:19,0:19:42.06:0,42,413	0/0:14,0:14:38.82:0,39,366	0/0:22,0:22:34.62:0,35,196	0/0:25,0:25:54.10:0,54,544	0/0:18,0:18:40.84:0,41,389	0/0:18,0:20:33.63:0,34,409	0/0:17,0:14:39.08:0,39,393	0/0:24,0:23:51.02:0,51,506	0/0:14,0:13:26.58:0,27,203	0/0:12,0:12:29.81:0,30,303	0/0:16,0:16:36.05:0,36,361	0/0:15,0:13:29.57:0,30,293	0/0:11,0:11:23.97:0,24,231	0/0:22,0:22:63.11:0,63,630	0/0:24,0:24:59.85:0,60,582	0/0:10,0:7:18.04:0,18,183
chr10	22219687	.	C	CT	3722.99	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-9.356;DP=347;FS=0.949;HRun=8;HaplotypeScore=50.6648;InbreedingCoeff=0.9446;MQ=74.13;MQ0=0;MQRankSum=-1.010;QD=26.98;ReadPosRankSum=-0.078;VQSLOD=4.0288;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,13:20:32.51:410,33,0	1/1:0,3:3:9.03:104,9,0	0/0:8,0:8:18:0,18,163	0/0:11,0:10:11.35:0,11,110	1/1:4,16:20:45.13:519,45,0	0/0:13,0:13:36.02:0,36,330	0/0:7,0:7:18:0,18,165	1/1:4,22:26:63.19:727,63,0	1/1:0,7:7:21.06:242,21,0	0/0:20,0:20:54.03:0,54,494	0/0:20,0:20:48.02:0,48,439	0/0:7,0:7:14.13:0,14,135	0/0:16,0:16:48.01:0,48,435	0/0:10,0:10:27.01:0,27,247	0/0:5,0:5:12.01:0,12,110	0/0:6,0:6:15:0,15,137	1/1:1,16:17:42.12:485,42,0	1/1:1,12:13:33.10:381,33,0	1/1:2,12:14:36.09:405,36,0	1/1:4,10:14:30.09:346,30,0	1/1:1,3:4:9.03:104,9,0	0/0:4,0:4:9:0,9,82	0/0:9,0:9:15:0,15,137	0/0:4,0:4:9:0,9,82	0/0:22,0:22:63.02:0,63,573	0/0:20,0:20:54.03:0,54,494	0/0:17,0:17:45.02:0,45,412	0/0:10,0:10:30.02:0,30,275
chr10	22220028	.	TTTTC	T	443.58	PASS	AB=0.977;AC=8;AF=0.160;AN=50;BaseQRankSum=-0.395;DP=318;FS=4.520;HRun=0;HaplotypeScore=87.2062;InbreedingCoeff=0.4490;MQ=59.93;MQ0=2;MQRankSum=0.579;QD=6.52;ReadPosRankSum=0.643;VQSLOD=1.2092;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:16,3:19:14.79:198,15,0	0/0:0,0:5:8.51:0,9,110	./.	./.	0/0:22,0:22:23.95:0,24,175	0/0:16,0:15:19.57:0,20,211	0/0:17,0:17:14.99:0,15,159	0/0:22,0:22:15.52:0,16,181	0/0:7,0:7:5.61:0,6,60	1/1:15,0:15:7.83:77,8,0	1/1:8,3:11:23.48:274,23,0	0/0:9,0:9:17.98:0,18,222	0/0:6,0:6:6.02:0,6,69	0/0:8,0:8:9:0,9,85	0/0:10,0:10:15:0,15,158	./.	0/0:16,0:16:9.02:0,9,129	0/0:9,0:9:3.01:0,3,51	0/0:14,0:12:7.50:0,7,45	0/0:8,0:8:8.82:0,9,90	0/0:5,0:5:5.98:0,6,47	0/1:2,0:2:10.25:10,0,28	0/0:4,0:4:8.94:0,9,75	0/0:15,0:15:3.01:0,3,35	0/0:15,0:14:18.05:0,18,155	0/1:20,1:21:22.43:22,0,444	0/0:18,0:18:24.08:0,24,504	0/0:5,0:5:6.02:0,6,112
chr10	22220069	.	T	TTTTG	2043.66	PASS	AB=0.982;AC=29;AF=0.537;AN=54;BaseQRankSum=4.719;DP=229;FS=17.998;HRun=0;HaplotypeScore=69.3895;InbreedingCoeff=-0.5290;MQ=45.81;MQ0=5;MQRankSum=-3.469;QD=9.78;ReadPosRankSum=3.933;VQSLOD=0.5433;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:6,7:13:18.62:100,0,19	1/1:6,0:6:10.44:99,10,0	1/1:9,0:2:0.31:1,0,0	./.	0/1:18,0:18:96.28:96,0,160	0/1:9,0:8:60.24:121,0,60	0/1:11,0:11:56.54:57,0,152	0/1:29,0:29:99:204,0,580	0/1:3,0:3:43.61:63,0,44	0/1:10,0:10:58.82:206,0,59	1/1:4,8:12:4.12:324,4,0	0/1:6,0:6:39.36:82,0,39	1/1:4,0:4:9.03:111,9,0	0/1:3,0:3:27.48:27,0,62	0/0:8,0:8:11.29:0,11,41	1/1:4,0:4:6.02:82,6,0	0/1:7,0:7:71.72:72,0,98	0/1:4,0:4:11.27:11,0,28	0/1:11,0:7:61.49:82,0,61	0/1:9,0:9:32:155,0,32	0/1:4,0:4:25.82:26,0,56	0/0:2,0:2:2.29:0,2,5	0/1:5,0:5:20.97:98,0,21	0/0:6,0:6:1.24:0,1,3	0/1:8,0:7:83.52:84,0,105	0/1:10,0:10:20.27:20,0,315	0/1:10,0:10:11.59:12,0,403	0/1:4,0:4:39.92:59,0,40
chr10	22220077	.	G	GTTCTTTCC	5030.68	PASS	AB=0.979;AC=37;AF=0.712;AN=52;BaseQRankSum=0.157;DP=209;FS=8.249;HRun=0;HaplotypeScore=72.4896;InbreedingCoeff=-0.3656;MQ=44.74;MQ0=3;MQRankSum=-0.176;QD=25.28;ReadPosRankSum=2.844;VQSLOD=3.3155;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:11,0:11:10.50:220,0,11	0/1:5,0:5:31:48,0,31	0/1:11,0:5:0.39:0,0,83	./.	0/1:18,0:18:15.91:241,0,16	0/1:7,0:6:17.95:321,0,18	0/1:8,0:8:6.80:136,0,7	0/1:27,0:27:92.83:785,0,93	1/1:1,0:1:3.01:101,3,0	0/1:9,0:9:30.87:260,0,31	0/1:9,0:9:1.95:283,0,2	1/1:6,0:6:9.03:275,9,0	1/1:3,0:3:9.03:290,9,0	1/1:2,0:2:3.01:109,3,0	0/1:8,0:8:15.21:70,0,15	1/1:2,2:4:6.02:145,6,0	1/1:5,0:5:6.02:152,6,0	1/1:4,0:4:2.94:18,3,0	1/1:9,0:7:12:222,12,0	1/1:9,0:9:12.04:381,12,0	1/1:3,0:3:3.01:74,3,0	0/1:2,0:2:9.21:9,0,11	0/1:5,0:5:4.73:199,0,5	./.	0/1:9,0:8:5.46:238,0,5	0/1:9,0:9:33.89:156,0,34	0/1:7,3:10:44.92:84,0,45	1/1:4,0:4:6.02:213,6,0
chr10	22220081	.	T	TTTCCTTCC	6889.06	PASS	AC=50;AF=0.926;AN=54;BaseQRankSum=-2.498;DP=210;FS=13.124;HRun=0;HaplotypeScore=63.6176;InbreedingCoeff=0.3146;MQ=47.44;MQ0=3;MQRankSum=-2.390;QD=36.84;ReadPosRankSum=3.269;VQSLOD=3.2766;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:11:14.98:291,15,0	1/1:5,0:5:3.01:76,3,0	0/0:15,0:7:4.40:0,4,178	0/0:6,0:2:5.50:0,6,44	1/1:19,0:19:12.04:330,12,0	1/1:5,2:6:9.03:375,9,0	1/1:6,1:7:7.27:185,7,0	1/1:24,0:24:39.13:1142,39,0	1/1:1,0:1:3.01:115,3,0	1/1:8,1:9:12.04:376,12,0	1/1:10,0:10:15.01:386,15,0	1/1:4,2:6:9.03:311,9,0	1/1:1,2:3:9.03:344,9,0	1/1:0,1:1:3.01:126,3,0	1/1:4,0:8:11.99:100,12,0	1/1:2,2:4:6.02:181,6,0	1/1:3,2:5:6.02:187,6,0	1/1:3,0:3:3.01:38,3,0	1/1:4,4:9:18.05:431,18,0	1/1:2,5:7:12.04:453,12,0	1/1:2,0:2:6.02:184,6,0	./.	1/1:4,1:5:6.02:234,6,0	1/1:5,1:6:3.01:111,3,0	1/1:7,1:7:9.03:304,9,0	1/1:5,4:10:8.90:227,9,0	1/1:9,1:10:6.02:129,6,0	1/1:0,4:5:6.02:252,6,0
chr10	22220886	.	C	CG	15279.31	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-6.335;DP=420;FS=9.453;HRun=2;HaplotypeScore=58.6466;InbreedingCoeff=0.9212;MQ=74.77;MQ0=1;MQRankSum=-5.126;QD=41.86;ReadPosRankSum=3.807;VQSLOD=4.2134;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,17:18:54.18:803,54,0	1/1:3,0:3:5.99:50,6,0	0/0:16,0:14:37.11:0,37,417	0/0:8,0:8:16.85:0,17,173	0/0:31,0:31:78.24:0,78,994	1/1:0,18:18:54.18:809,54,0	1/1:0,15:15:42.14:629,42,0	1/1:0,29:29:87.28:1276,87,0	1/1:0,11:11:33.11:494,33,0	1/1:4,13:17:45.14:653,45,0	1/1:1,13:14:39.13:577,39,0	1/1:0,17:17:45.15:673,45,0	1/1:2,13:16:45.15:663,45,0	1/1:1,11:12:30.10:450,30,0	1/1:2,15:17:51.16:743,51,0	1/1:1,13:14:42.13:608,42,0	1/1:0,20:20:54.18:807,54,0	1/1:0,11:11:33.11:493,33,0	1/1:0,15:14:42.12:606,42,0	1/1:2,11:13:36.11:511,36,0	1/1:0,7:7:18.06:268,18,0	1/1:0,10:10:24.08:358,24,0	1/1:0,9:9:27.09:404,27,0	1/1:0,10:10:27.09:404,27,0	1/1:0,22:22:63.21:943,63,0	1/1:0,22:22:66.22:986,66,0	1/1:2,20:22:66.22:982,66,0	1/1:0,2:2:6.02:88,6,0
chr10	22220944	.	A	AT	11944.33	PASS	AB=1.000;AC=39;AF=0.696;AN=56;BaseQRankSum=-11.872;DP=506;FS=0.375;HRun=0;HaplotypeScore=80.4750;InbreedingCoeff=0.5308;MQ=68.45;MQ0=1;MQRankSum=-3.664;QD=28.04;ReadPosRankSum=-1.983;VQSLOD=4.5438;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,14:15:33.11:460,33,0	1/1:0,7:7:12.04:167,12,0	0/0:11,0:9:12.66:0,13,109	0/0:5,0:4:3.59:0,4,11	1/1:0,29:29:74.99:956,75,0	0/1:18,0:18:23.64:61,0,24	0/1:11,0:11:13.33:32,0,13	1/1:0,34:34:99:1334,102,0	1/1:0,16:16:42.14:584,42,0	1/1:1,24:25:72.20:953,72,0	1/1:0,21:21:63.14:850,63,0	0/0:15,0:15:24.26:0,24,100	0/1:23,0:23:8.61:9,0,53	0/1:20,0:20:12.75:13,0,45	1/1:0,23:23:57.19:792,57,0	1/1:0,21:21:51.17:707,51,0	1/1:3,13:17:43.66:556,44,0	1/1:0,20:19:48.16:669,48,0	1/1:1,21:22:63.10:783,63,0	1/1:1,29:30:78.10:1018,78,0	1/1:0,8:8:21.07:292,21,0	0/1:16,0:16:18.02:18,0,49	0/0:13,0:13:21:0,21,55	0/0:9,0:9:12.46:0,12,34	0/0:27,0:27:21.16:0,21,127	1/1:2,14:16:48.14:638,48,0	1/1:0,28:28:69.06:956,69,0	1/1:2,4:6:3.45:98,3,0
chr10	22221632	.	GT	G	11554.14	PASS	AB=0.909;AC=53;AF=0.946;AN=56;BaseQRankSum=0.110;DP=561;FS=5.401;HRun=10;HaplotypeScore=52.8351;InbreedingCoeff=0.6115;MQ=71.24;MQ0=0;MQRankSum=-3.961;QD=20.93;ReadPosRankSum=3.520;VQSLOD=5.8355;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,30:33:83.98:729,84,0	1/1:1,10:11:26.99:234,27,0	0/1:9,1:10:14.05:14,0,74	0/0:9,0:8:9.02:0,9,100	1/1:5,22:27:65.98:573,66,0	1/1:0,16:16:41.98:365,42,0	1/1:1,15:16:41.98:365,42,0	1/1:7,24:31:68.90:587,69,0	1/1:2,18:20:44.99:391,45,0	1/1:4,24:28:68.97:599,69,0	1/1:0,22:22:59.98:521,60,0	1/1:1,12:14:35.03:292,35,0	1/1:2,21:23:53.98:469,54,0	1/1:3,21:24:26.81:462,27,0	1/1:1,15:16:44.99:391,45,0	1/1:0,19:19:56.99:495,57,0	1/1:5,21:26:62.97:547,63,0	1/1:4,16:20:38.96:339,39,0	1/1:3,11:14:29.98:260,30,0	1/1:6,24:30:65.94:573,66,0	1/1:3,12:15:35.99:313,36,0	1/1:0,21:21:62.99:547,63,0	1/1:6,21:27:35.77:537,36,0	1/1:2,15:17:41.99:365,42,0	1/1:2,18:20:47.99:417,48,0	1/1:1,16:17:41.97:365,42,0	1/1:3,17:20:50.99:443,51,0	1/1:0,15:15:41.99:365,42,0
chr10	22224911	.	CT	C	3660.83	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=9.000;DP=609;FS=8.371;HRun=7;HaplotypeScore=113.2714;InbreedingCoeff=0.9983;MQ=76.76;MQ0=0;MQRankSum=-13.096;QD=27.53;ReadPosRankSum=1.379;VQSLOD=2.9058;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:69.17:0,69,837	0/0:14,0:14:42.09:0,42,510	0/0:17,0:17:45.13:0,45,543	0/0:21,0:20:37.04:0,37,503	0/0:31,0:31:90.28:0,90,1118	0/0:30,0:30:81.24:0,81,1001	0/0:19,0:19:45.14:0,45,566	0/0:36,0:36:99:0,102,1246	0/0:15,0:15:42.09:0,42,490	1/1:3,19:22:60.14:612,60,0	1/1:4,15:19:42.09:428,42,0	0/0:26,0:26:72.23:0,72,906	0/0:28,0:28:69.22:0,69,868	0/0:21,0:21:57.17:0,57,703	0/0:26,0:26:63.19:0,63,781	1/1:2,20:22:60.13:612,60,0	0/0:8,0:8:21.04:0,21,234	0/0:12,0:12:24.03:0,24,284	0/0:25,0:25:54.17:0,54,679	0/0:27,0:27:69.21:0,69,857	0/0:15,0:15:36.12:0,36,453	0/0:19,0:19:51.16:0,51,642	0/0:20,0:20:60.18:0,60,740	0/0:18,0:18:39.12:0,39,490	0/0:23,0:23:60.19:0,60,753	1/1:5,22:27:78.16:788,78,0	1/1:2,30:32:96.22:978,96,0	1/1:3,8:11:24.05:243,24,0
chr10	22224944	.	TC	T	18487.66	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=6.015;DP=581;FS=5.484;HRun=1;HaplotypeScore=69.9218;InbreedingCoeff=0.9994;MQ=79.27;MQ0=0;MQRankSum=-6.455;QD=37.50;ReadPosRankSum=3.827;VQSLOD=5.4255;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,20:20:57.10:772,57,0	1/1:0,13:13:36.12:503,36,0	0/0:11,0:11:33.10:0,33,506	0/0:24,0:23:65.23:0,65,963	0/0:28,0:28:84.27:0,84,1313	1/1:0,26:26:66.22:922,66,0	1/1:0,16:16:39.13:545,39,0	1/1:0,27:27:81.24:1096,81,0	1/1:0,12:12:36.12:503,36,0	1/1:1,21:22:63.21:879,63,0	1/1:0,20:20:47.99:619,48,0	1/1:0,28:28:75.25:1048,75,0	1/1:1,27:28:72.24:1002,72,0	1/1:0,21:21:63.21:880,63,0	0/0:25,0:25:72.22:0,72,1105	1/1:1,20:21:54.18:752,54,0	1/1:0,12:12:33.11:461,33,0	1/1:0,11:11:27.09:377,27,0	1/1:0,21:21:63.16:842,63,0	1/1:0,24:24:69.16:940,69,0	1/1:0,17:17:36.12:503,36,0	1/1:0,17:17:42.14:587,42,0	1/1:0,17:17:51.08:688,51,0	1/1:0,16:16:45.15:629,45,0	1/1:0,24:24:60.20:839,60,0	1/1:1,26:27:81.26:1113,81,0	1/1:1,38:39:99:1528,111,0	1/1:3,11:14:33.11:459,33,0
chr10	22225524	.	CAAAACAAA	C	683.93	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-3.317;DP=452;FS=6.709;HRun=0;HaplotypeScore=152.9844;InbreedingCoeff=0.6600;MQ=60.53;MQ0=3;MQRankSum=-4.644;QD=40.23;ReadPosRankSum=1.467;VQSLOD=3.1484;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:8:21.07:0,21,673	0/0:16,0:16:36.07:0,36,1074	0/0:12,0:8:11.32:0,11,252	0/0:13,0:8:18.06:0,18,416	0/0:19,0:19:54.18:0,54,1705	0/0:20,0:20:54.18:0,54,1837	0/0:15,0:15:36.12:0,36,1204	0/0:25,0:25:45.11:0,45,1051	0/0:13,0:13:27.02:0,27,729	0/0:29,0:29:72.22:0,72,2040	0/0:29,0:29:59.90:0,60,1800	0/0:13,0:13:33.11:0,33,1080	0/0:18,0:18:42.12:0,42,1209	0/0:19,0:19:33.11:0,33,1082	1/1:6,11:17:30.10:778,30,0	0/0:23,0:22:45.15:0,45,1535	0/0:10,0:10:18.06:0,18,575	0/0:5,0:5:12.04:0,12,375	0/0:18,0:17:42.09:0,42,1063	0/0:19,0:19:51.13:0,51,1556	0/0:4,0:4:9.03:0,9,313	0/0:11,0:11:33.09:0,33,987	0/0:22,0:22:48.16:0,48,1536	0/0:5,0:5:3.01:0,3,44	0/0:23,0:23:54.18:0,54,1863	0/0:16,0:16:42.09:0,42,1272	0/0:27,0:25:54.18:0,54,1778	0/0:3,0:3:3.01:0,3,104
chr10	22225537	.	C	CAAA	14243.96	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-6.389;DP=477;FS=3.878;HRun=8;HaplotypeScore=74.8943;InbreedingCoeff=0.8181;MQ=64.90;MQ0=4;MQRankSum=1.346;QD=33.05;ReadPosRankSum=1.467;VQSLOD=3.8034;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,0:10:20.95:188,21,0	1/1:3,12:16:33.05:584,33,0	0/0:18,0:13:10.79:0,11,238	0/0:15,0:9:18.03:0,18,220	1/1:2,0:20:22.12:47,22,0	1/1:1,21:22:54.19:1091,54,0	1/1:3,13:17:30.10:606,30,0	1/1:5,17:26:66.14:1047,66,0	1/1:0,13:13:27.09:545,27,0	1/1:6,0:28:56.95:737,57,0	1/1:5,3:33:58.79:739,59,0	1/1:3,10:13:36.11:686,36,0	1/1:4,10:15:30.08:568,30,0	1/1:2,13:16:30.10:606,30,0	0/0:12,0:13:32.82:0,33,245	1/1:5,1:22:36.12:535,36,0	1/1:4,6:10:9.03:182,9,0	1/1:0,6:8:9.50:183,10,0	1/1:5,16:20:47.98:823,48,0	1/1:0,18:21:63.08:1118,63,0	1/1:0,6:6:9.03:182,9,0	1/1:2,12:14:36.08:681,36,0	1/1:6,14:21:42.05:742,42,0	1/1:2,2:4:3.01:60,3,0	1/1:3,20:25:54.13:983,54,0	1/1:1,3:17:42.13:632,42,0	1/1:4,1:28:41.54:636,42,0	1/1:0,0:2:3.01:43,3,0
chr10	22227794	.	TG	T	6289.62	PASS	AB=0.929;AC=17;AF=0.304;AN=56;BaseQRankSum=8.405;DP=607;FS=2.507;HRun=1;HaplotypeScore=63.2965;InbreedingCoeff=0.9240;MQ=93.18;MQ0=0;MQRankSum=-3.223;QD=34.18;ReadPosRankSum=-1.707;VQSLOD=4.1982;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,105,1629	1/1:0,5:5:15.05:210,15,0	0/0:27,0:27:78.26:0,78,1209	0/0:27,0:27:74.94:0,75,1108	0/0:29,0:29:87.30:0,87,1390	0/0:23,0:22:65.13:0,65,1027	0/0:18,0:18:54.18:0,54,863	1/1:0,31:31:93.31:1301,93,0	1/1:0,22:22:54.16:755,54,0	0/0:24,0:23:72.25:0,72,1151	0/0:25,0:25:75.20:0,75,1105	0/0:18,0:18:54.17:0,54,840	0/0:21,0:21:63.19:0,63,981	0/0:28,0:28:84.27:0,84,1314	0/0:15,0:15:45.15:0,45,719	0/1:24,2:26:5.65:6,0,1071	1/1:0,33:33:96.32:1342,96,0	1/1:0,4:4:12.04:168,12,0	1/1:0,22:22:66.19:872,66,0	1/1:0,26:26:75.25:1049,75,0	1/1:0,15:15:42.14:587,42,0	0/0:13,0:13:39.13:0,39,623	0/0:17,0:17:51.14:0,51,765	0/0:19,0:19:57.18:0,57,887	0/0:21,0:21:63.19:0,63,981	0/0:33,0:33:96.32:0,96,1514	0/0:24,0:24:72.25:0,72,1151	0/0:6,0:6:18.06:0,18,287
chr10	22228066	.	T	TAA	3593.69	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-12.888;DP=532;FS=2.265;HRun=2;HaplotypeScore=99.3348;InbreedingCoeff=0.9870;MQ=74.73;MQ0=0;MQRankSum=-0.740;QD=51.34;ReadPosRankSum=1.487;VQSLOD=3.4457;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:60.20:0,60,884	0/0:12,0:12:36.12:0,36,529	0/0:10,0:10:29.83:0,30,397	0/0:8,0:8:23.90:0,24,300	1/1:2,38:39:99:2076,111,0	0/0:16,0:16:48.16:0,48,705	0/0:16,0:16:45.15:0,45,663	0/0:28,0:28:78.26:0,78,1132	0/0:13,0:13:39.13:0,39,573	0/0:21,0:21:57.19:0,57,839	0/0:33,0:33:99:0,99,1439	0/0:26,0:26:72.24:0,72,1060	0/0:20,0:20:60.20:0,60,884	0/0:17,0:17:48.16:0,48,706	1/1:1,29:30:81.28:1518,81,0	0/0:18,0:18:54.18:0,54,795	0/0:18,0:18:54.18:0,54,795	0/0:8,0:8:21.04:0,21,286	0/0:23,0:23:63.19:0,63,891	0/0:25,0:25:72.24:0,72,1059	0/0:5,0:5:15.03:0,15,201	0/0:13,0:13:39.13:0,39,574	0/0:20,0:20:60.19:0,60,864	0/0:11,0:11:30.10:0,30,442	0/0:23,0:23:66.22:0,66,972	0/0:21,0:21:63.21:0,63,928	0/0:29,0:29:84.25:0,84,1198	0/0:8,0:8:24.08:0,24,353
chr10	22228484	.	C	CT	1895.64	PASS	AB=0.825;AC=26;AF=0.464;AN=56;BaseQRankSum=5.391;DP=580;FS=3.614;HRun=11;HaplotypeScore=78.1135;InbreedingCoeff=0.6791;MQ=73.91;MQ0=0;MQRankSum=-3.430;QD=6.54;ReadPosRankSum=-2.703;VQSLOD=1.8437;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,0:16:23.50:129,24,0	0/1:11,1:12:3.57:4,0,159	0/1:16,1:15:5.68:6,0,110	0/0:15,0:14:3.68:0,4,123	0/0:32,1:33:41.25:0,41,503	1/1:6,3:36:40.06:222,40,0	1/1:5,1:21:27.09:148,27,0	0/0:30,0:30:39.95:0,40,426	0/0:25,0:25:59.69:0,60,458	0/0:27,0:29:63.26:0,63,471	0/1:15,2:18:49.19:49,0,176	1/1:2,0:12:7.03:36,7,0	1/1:6,1:23:20.43:114,20,0	1/1:4,1:14:13.83:83,14,0	1/1:9,29:38:5.44:600,5,0	0/1:2,16:19:7.47:280,0,7	0/0:24,0:24:58.98:0,59,448	0/0:16,0:17:31.87:0,32,238	0/0:17,0:18:43.86:0,44,330	0/0:20,0:20:27.25:0,27,326	0/0:10,0:10:17.91:0,18,139	1/1:1,0:12:21.20:110,21,0	1/1:6,0:24:33.90:186,34,0	1/1:4,0:4:5.21:22,5,0	1/1:5,1:23:20.05:114,20,0	0/0:32,2:34:32.43:0,32,492	0/0:27,0:31:47.21:0,47,476	0/0:3,0:3:8.94:0,9,66
chr10	22230084	.	T	TA	389.83	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-5.370;DP=479;FS=0.000;HRun=8;HaplotypeScore=46.0123;InbreedingCoeff=0.9769;MQ=73.14;MQ0=0;MQRankSum=-2.236;QD=25.99;ReadPosRankSum=-0.594;VQSLOD=3.8249;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,14:15:42.12:485,42,0	0/0:10,0:10:30:0,30,270	0/0:13,0:13:20.99:0,21,195	0/0:8,0:8:17.90:0,18,164	0/0:26,0:26:68.95:0,69,614	0/0:12,0:12:36.02:0,36,329	0/0:13,0:13:36:0,36,324	0/0:38,0:38:99:0,108,978	0/0:16,0:16:42.02:0,42,384	0/0:28,0:28:75.03:0,75,684	0/0:24,0:24:63.01:0,63,569	0/0:14,0:14:39.01:0,39,352	0/0:19,0:19:45.02:0,45,412	0/0:16,0:16:48.03:0,48,439	0/0:15,0:15:36.01:0,36,329	0/0:26,0:26:69.01:0,69,624	0/0:9,0:9:27.01:0,27,247	0/0:25,0:25:62.97:0,63,563	0/0:12,0:12:36:0,36,323	0/0:21,0:21:51:0,51,461	0/0:11,0:11:33.02:0,33,302	0/0:8,0:8:24.01:0,24,220	0/0:10,0:10:30.02:0,30,274	0/0:11,0:11:24.01:0,24,220	0/0:22,0:22:63.02:0,63,572	0/0:20,0:20:51.02:0,51,467	0/0:26,0:25:65.97:0,66,591	0/0:11,0:11:21.01:0,21,192
chr10	22230481	.	ATG	A	367.69	PASS	AB=0.974;AC=4;AF=0.071;AN=56;BaseQRankSum=1.377;DP=517;FS=10.337;HRun=0;HaplotypeScore=115.6124;InbreedingCoeff=0.2701;MQ=59.63;MQ0=6;MQRankSum=2.161;QD=6.45;ReadPosRankSum=2.289;VQSLOD=2.8227;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:22:18.50:0,18,238	0/0:11,0:11:27.03:0,27,341	0/0:19,0:6:4.25:0,4,31	0/0:13,0:10:0.05:0,0,107	1/1:5,19:24:39.03:453,39,0	0/0:26,0:26:27.01:0,27,259	0/0:12,0:26:14.99:0,15,130	0/0:40,1:40:59.89:0,60,1348	0/0:12,0:12:30.10:0,30,477	0/1:17,1:18:15.46:15,0,204	0/0:19,0:18:24.05:0,24,301	0/0:12,0:12:6:0,6,51	0/0:17,0:17:17.79:0,18,176	0/0:23,0:23:20.21:0,20,152	0/0:17,0:17:20.78:0,21,257	0/0:16,0:16:23.54:0,24,259	0/0:14,0:14:17.55:0,18,284	0/0:24,1:25:11.61:0,12,559	0/1:14,0:13:8.52:9,0,320	0/0:23,0:23:63.21:0,63,1007	0/0:19,0:19:9.11:0,9,598	0/0:15,0:15:11.49:0,11,75	0/0:15,0:15:5.99:0,6,50	0/0:13,0:13:3:0,3,26	0/0:19,0:19:21:0,21,202	0/0:15,0:15:18.05:0,18,218	0/0:22,0:22:33.08:0,33,444	0/0:5,0:5:11.50:0,12,84
chr10	22230489	.	G	GTGTGTGTGTGTGTA	9076.88	PASS	AB=0.629;AC=25;AF=0.446;AN=56;BaseQRankSum=-3.508;DP=599;FS=0.530;HRun=0;HaplotypeScore=186.8306;InbreedingCoeff=0.2612;MQ=54.45;MQ0=7;MQRankSum=-8.350;QD=24.14;ReadPosRankSum=1.300;VQSLOD=4.0316;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:25:68.62:69,0,131	0/0:13,0:13:33.03:0,33,717	0/0:23,0:7:14.45:0,14,106	0/0:14,0:11:22.67:0,23,278	0/0:25,0:24:44.77:0,45,1108	1/1:3,21:35:14.87:1563,15,0	1/1:26,0:26:20.05:469,20,0	0/0:42,0:40:93.01:0,93,1500	0/0:14,0:14:33.06:0,33,991	0/1:10,0:23:93.69:373,0,94	0/1:8,0:19:99:260,0,112	1/1:3,8:14:6.02:410,6,0	0/1:4,12:24:19.53:808,0,20	1/1:2,19:26:18.06:1229,18,0	0/1:9,0:31:99:124,0,128	0/1:5,0:17:89.72:399,0,90	0/0:14,0:14:23.27:0,23,503	0/0:23,0:23:48.11:0,48,1106	0/0:16,0:14:32.11:0,32,659	0/0:23,0:23:63.20:0,63,2035	0/0:16,0:16:32.42:0,32,1090	1/1:2,11:22:6.02:410,6,0	1/1:4,7:18:3.01:205,3,0	1/1:6,4:16:8.70:614,9,0	0/1:2,16:29:17.87:1008,0,18	0/1:6,0:19:54.25:342,0,54	0/1:9,0:25:99:516,0,218	1/1:1,0:5:6.02:278,6,0
chr10	22231118	.	TAA	T	9651.42	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=11.213;DP=559;FS=5.614;HRun=10;HaplotypeScore=90.0633;InbreedingCoeff=0.9401;MQ=70.18;MQ0=0;MQRankSum=-0.593;QD=26.74;ReadPosRankSum=5.060;VQSLOD=4.9261;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,20:23:54.14:602,54,0	0/0:7,0:8:17.55:0,18,247	0/0:15,0:14:2.08:0,2,335	0/0:11,0:9:21.04:0,21,276	1/1:2,33:35:84.19:936,84,0	1/1:0,18:18:51.14:569,51,0	1/1:2,13:15:39.10:435,39,0	0/0:29,0:29:69.21:0,69,1050	0/0:15,0:15:36.12:0,36,569	1/1:4,23:27:69.15:758,69,0	1/1:4,22:26:57.13:635,57,0	1/1:1,15:16:42.11:468,42,0	1/1:3,17:20:48.12:535,48,0	1/1:4,19:23:51.13:569,51,0	0/0:4,0:25:60.10:0,60,573	1/1:0,19:19:48.13:535,48,0	0/0:17,0:17:45.11:0,45,659	0/0:22,0:22:66.21:0,66,1022	0/0:20,0:20:48.15:0,48,724	0/0:28,0:28:69.24:0,69,1094	0/0:8,0:8:21.07:0,21,333	1/1:4,18:22:54.13:602,54,0	1/1:5,20:25:51.12:569,51,0	1/1:2,9:11:27.06:301,27,0	1/1:3,20:23:54.12:602,54,0	1/1:3,22:25:66.17:734,66,0	1/1:1,24:25:69.19:769,69,0	1/1:2,6:8:2.08:32,2,0
chr10	22232174	.	G	GT	534.78	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.821;DP=633;FS=0.879;HRun=3;HaplotypeScore=122.9897;InbreedingCoeff=0.9661;MQ=81.33;MQ0=0;MQRankSum=-2.003;QD=25.47;ReadPosRankSum=-0.699;VQSLOD=2.7953;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:78.26:0,78,1072	0/0:12,0:12:36.12:0,36,504	0/0:13,0:13:33.08:0,33,440	0/0:23,0:23:66.17:0,66,882	0/0:27,0:27:46.86:0,47,359	0/0:27,0:27:64.34:0,64,358	0/0:23,0:23:63.28:0,63,336	0/0:26,0:26:75.25:0,75,1048	0/0:27,0:27:81.26:0,81,1114	0/0:27,0:27:68.45:0,68,337	0/0:19,0:19:47.39:0,47,260	0/0:37,0:37:99:0,104,576	0/0:27,0:27:73.44:0,73,415	0/0:21,0:21:54.80:0,55,306	1/1:2,19:21:49.15:630,49,0	0/0:26,0:26:75.34:0,75,440	0/0:27,0:27:81.27:0,81,1131	0/0:14,0:14:42.14:0,42,576	0/0:25,0:25:75.25:0,75,1047	0/0:23,0:23:66.22:0,66,920	0/0:23,0:23:69.23:0,69,963	0/0:4,0:4:11.52:0,12,61	0/0:17,0:17:43.28:0,43,241	0/0:20,0:20:49.73:0,50,278	0/0:19,0:19:55.04:0,55,308	0/0:31,0:31:58.28:0,58,393	0/0:36,0:35:96.18:0,96,591	0/0:11,0:11:32.03:0,32,184
chr10	22232415	.	G	GATT	789.55	PASS	AC=2;AF=0.037;AN=54;BaseQRankSum=-1.802;DP=414;FS=3.758;HRun=0;HaplotypeScore=71.0303;InbreedingCoeff=0.8586;MQ=64.34;MQ0=0;MQRankSum=-0.212;QD=60.73;ReadPosRankSum=0.011;VQSLOD=5.4026;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:39.13:0,39,649	0/0:13,0:13:36.12:0,36,592	./.	0/0:6,0:5:9.72:0,10,149	0/0:24,0:24:69.19:0,69,1071	0/0:8,0:8:24.08:0,24,396	0/0:10,0:10:24.08:0,24,400	0/0:41,0:41:99:0,114,1848	0/0:10,0:10:27.09:0,27,450	0/0:22,0:22:63.22:0,63,1050	0/0:18,0:18:51.17:0,51,850	0/0:8,0:8:24.08:0,24,397	0/0:11,0:11:33.11:0,33,550	0/0:18,0:18:48.16:0,48,800	1/1:0,13:13:39.13:884,39,0	0/0:5,0:5:15.05:0,15,250	0/0:20,0:20:57.19:0,57,944	0/0:15,0:15:45.15:0,45,744	0/0:17,0:17:45.15:0,45,749	0/0:18,0:18:51.17:0,51,850	0/0:5,0:5:15.05:0,15,250	0/0:3,0:3:9.03:0,9,150	0/0:15,0:15:45.15:0,45,744	0/0:7,0:7:15.05:0,15,250	0/0:22,0:22:63.22:0,63,1050	0/0:22,0:22:66.23:0,66,1100	0/0:28,0:28:81.28:0,81,1349	0/0:19,0:19:54.18:0,54,899
chr10	22232821	.	T	TTC	6574.69	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-11.911;DP=579;FS=7.650;HRun=0;HaplotypeScore=70.1031;InbreedingCoeff=0.9834;MQ=70.21;MQ0=6;MQRankSum=-0.090;QD=37.15;ReadPosRankSum=3.159;VQSLOD=7.0232;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:68.90:0,69,1001	0/0:11,0:11:33.10:0,33,473	0/0:29,0:19:36.14:0,36,425	0/0:30,0:17:32.65:0,33,430	0/0:22,0:22:66.14:0,66,942	1/1:1,21:22:54.18:952,54,0	1/1:1,11:12:30.10:519,30,0	0/0:32,0:32:73.83:0,74,1125	0/0:20,0:20:60.18:0,60,890	0/0:28,0:28:84.27:0,84,1231	0/0:26,0:26:75.23:0,75,1102	1/1:0,15:15:36.12:635,36,0	1/1:2,24:26:57.19:984,57,0	1/1:1,17:16:32.98:582,33,0	0/0:13,0:13:39.12:0,39,573	0/0:17,0:17:51.16:0,51,759	0/0:23,0:23:67.09:0,67,961	0/0:23,0:23:63.21:0,63,961	0/0:12,0:12:33.08:0,33,479	0/0:29,0:29:87.30:0,87,1327	0/0:7,0:7:21.06:0,21,300	1/1:0,23:23:60.12:1000,60,0	1/1:1,28:30:57.10:966,57,0	1/1:1,9:10:6.52:303,7,0	1/1:0,19:21:36.12:633,36,0	0/0:18,0:18:54.16:0,54,768	0/0:28,0:28:81.24:0,81,1175	0/0:8,0:8:21.05:0,21,299
chr10	22233118	.	GCAATAGTGGGCT	G	12053.36	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=15.133;DP=622;FS=6.956;HRun=0;HaplotypeScore=214.5169;InbreedingCoeff=0.9806;MQ=78.68;MQ0=0;MQRankSum=-15.228;QD=70.90;ReadPosRankSum=4.289;VQSLOD=3.8783;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:81.28:0,81,4874	0/0:11,0:11:30.09:0,30,1662	0/0:18,0:19:36.28:0,36,1558	0/0:16,0:16:45.15:0,45,2008	0/0:30,0:30:84.24:0,84,4526	1/1:2,27:29:57.20:2067,57,0	1/1:3,7:10:15.05:549,15,0	0/0:30,0:30:75.24:0,75,3968	0/0:27,0:27:72.25:0,72,3868	0/0:25,0:25:72.24:0,72,3789	0/0:24,0:24:63.20:0,63,3593	1/1:0,26:26:54.19:1958,54,0	1/1:4,10:15:33.11:1167,33,0	1/1:2,12:14:30.10:1097,30,0	0/0:19,0:19:54.17:0,54,2869	0/0:27,0:27:75.23:0,75,3997	0/0:21,0:21:54.19:0,54,3248	0/0:18,0:18:48.16:0,48,2786	0/0:17,0:17:51.17:0,51,2756	0/0:36,0:36:99:0,105,6003	0/0:28,0:28:81.26:0,81,4721	1/1:2,22:24:57.20:2053,57,0	1/1:0,20:20:44.72:1626,45,0	1/1:4,9:13:6.02:219,6,0	1/1:1,18:19:36.12:1317,36,0	0/0:29,0:29:81.27:0,81,4579	0/0:35,0:34:96.33:0,96,5703	0/0:9,0:9:27.09:0,27,1561
chr10	22233618	.	C	CTATT	3185.99	PASS	AC=32;AF=0.593;AN=54;BaseQRankSum=8.323;DP=370;FS=0.000;HRun=0;HaplotypeScore=79.0797;InbreedingCoeff=0.7808;MQ=66.50;MQ0=0;MQRankSum=-4.038;QD=15.39;ReadPosRankSum=-0.981;VQSLOD=2.7959;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,16:28:33.11:757,33,0	0/0:5,0:5:12.03:0,12,172	0/0:9,0:7:6:0,6,58	0/0:7,0:6:3:0,3,28	1/1:26,0:26:26.80:247,27,0	1/1:18,0:18:15.05:260,15,0	./.	0/0:33,0:33:42.07:0,42,472	0/0:9,0:9:15.04:0,15,221	1/1:18,0:18:27.01:355,27,0	1/1:18,0:18:26.84:360,27,0	1/1:5,0:5:3.01:60,3,0	1/1:11,0:11:14.92:161,15,0	1/1:8,0:8:3.01:54,3,0	0/0:18,0:18:33.11:0,33,539	1/1:8,0:8:5.95:65,6,0	0/0:26,0:26:57.09:0,57,802	0/0:7,0:7:14.95:0,15,186	0/0:14,0:14:24.07:0,24,349	0/0:28,0:28:36.08:0,36,510	0/0:4,0:4:12.03:0,12,172	1/1:3,0:3:3.01:47,3,0	1/1:9,0:9:14.91:154,15,0	1/1:5,0:5:3.01:44,3,0	1/1:9,0:9:9.03:156,9,0	1/1:21,0:21:39:456,39,0	1/1:12,0:12:9.03:156,9,0	1/1:8,0:8:3.01:52,3,0
chr10	22233639	.	T	TATTTATTTATTC	8983.30	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=-0.130;DP=385;FS=11.703;HRun=0;HaplotypeScore=103.3860;InbreedingCoeff=0.8702;MQ=56.99;MQ0=3;MQRankSum=0.223;QD=42.98;ReadPosRankSum=-1.894;VQSLOD=3.5021;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:25.25:0,25,191	0/0:5,0:5:12.04:0,12,386	0/0:10,0:7:18.04:0,18,220	0/0:6,0:3:9.01:0,9,120	1/1:1,22:30:53.77:1065,54,0	1/1:1,0:21:15.05:820,15,0	1/1:3,0:3:8.99:75,9,0	0/0:29,0:29:81.16:0,81,1224	0/0:11,0:11:30.02:0,30,625	1/1:1,12:22:63.01:1528,63,0	1/1:1,11:19:47.49:1320,47,0	1/1:0,0:6:3.01:162,3,0	1/1:10,0:10:26.82:226,27,0	1/1:1,0:13:3.01:131,3,0	0/0:18,0:18:51.12:0,51,1397	1/1:10,0:10:29.99:308,30,0	0/0:24,0:23:66.08:0,66,1811	0/0:6,0:6:18.04:0,18,436	0/0:16,0:15:45.10:0,45,979	0/0:22,0:22:60.12:0,60,1309	0/0:7,0:7:21.01:0,21,461	1/1:7,0:7:17.91:142,18,0	1/1:8,0:8:23.70:189,24,0	1/1:2,0:2:6.01:93,6,0	1/1:0,0:12:9.03:492,9,0	1/1:3,14:24:56.64:1696,57,0	1/1:1,8:13:9.03:551,9,0	1/1:0,3:9:3.01:184,3,0
chr10	22233788	.	AG	A	4264.88	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=12.186;DP=509;FS=24.711;HRun=5;HaplotypeScore=52.1911;InbreedingCoeff=0.9917;MQ=80.58;MQ0=0;MQRankSum=-2.346;QD=29.62;ReadPosRankSum=2.812;VQSLOD=2.9935;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:41.99:0,42,512	0/0:5,0:5:15.05:0,15,205	0/0:18,0:18:45.05:0,45,564	0/0:28,1:27:60.42:0,60,808	0/0:36,0:36:99:0,108,1437	1/1:1,27:28:72.21:816,72,0	1/1:1,14:15:36.10:408,36,0	0/0:20,0:20:54.16:0,54,697	0/0:17,0:17:51.15:0,51,679	0/0:16,0:16:48.15:0,48,628	0/0:26,0:26:78.16:0,78,1022	1/1:0,19:19:57.16:646,57,0	1/1:0,18:18:48.14:543,48,0	1/1:1,22:23:63.14:700,63,0	0/0:21,0:21:63.21:0,63,860	0/0:22,0:22:63.19:0,63,832	0/0:14,0:14:39.13:0,39,533	0/0:12,0:12:32.97:0,33,391	0/0:17,0:17:42.14:0,42,572	0/0:25,0:25:72.20:0,72,937	0/0:30,0:30:90.25:0,90,1179	1/1:2,10:12:30.08:337,30,0	1/1:1,12:13:30.08:338,30,0	1/1:0,6:6:12.03:136,12,0	1/1:0,10:10:30.09:340,30,0	0/0:18,0:18:54.15:0,54,718	0/0:16,0:16:48.14:0,48,625	0/0:9,0:9:21.07:0,21,286
chr10	22235112	.	C	CTCTT	20793.56	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=-6.999;DP=850;FS=0.906;HRun=0;HaplotypeScore=181.1900;InbreedingCoeff=0.9991;MQ=73.35;MQ0=11;MQRankSum=-3.422;QD=50.96;ReadPosRankSum=0.288;VQSLOD=5.5076;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,99,1762	0/0:8,0:8:21.06:0,21,366	0/0:72,0:44:50.03:0,50,1221	0/0:109,0:52:85.14:0,85,1191	1/1:0,25:27:65.57:1271,66,0	1/1:10,17:27:74.54:1262,75,0	1/1:12,4:16:44.37:626,44,0	0/0:33,0:32:96.21:0,96,1447	0/0:26,0:26:69.22:0,69,1248	1/1:2,21:24:63.15:1436,63,0	1/1:1,17:18:42.93:754,43,0	1/1:14,16:31:69.97:1601,70,0	1/1:8,10:20:59.87:1070,60,0	1/1:7,22:29:83.08:1469,83,0	0/0:38,0:37:99:0,105,1763	1/1:11,19:30:85.78:1595,86,0	0/0:34,0:34:78.19:0,78,1297	0/0:10,0:9:24.02:0,24,366	0/0:15,0:14:39.09:0,39,615	0/0:18,0:18:42.08:0,42,643	0/0:39,0:39:93.22:0,93,1491	1/1:10,17:27:67.90:1136,68,0	1/1:7,18:25:62.24:1023,62,0	1/1:7,18:25:57.06:1299,57,0	1/1:7,23:31:92.66:1387,93,0	1/1:2,29:32:36.36:2176,36,0	1/1:1,29:31:72.12:1739,72,0	1/1:1,14:15:36.12:950,36,0
chr10	22235148	.	GAC	G	4504.95	PASS	AB=0.940;AC=26;AF=0.464;AN=56;BaseQRankSum=1.216;DP=768;FS=12.187;HRun=0;HaplotypeScore=169.8698;InbreedingCoeff=0.6662;MQ=56.01;MQ0=17;MQRankSum=-2.638;QD=11.07;ReadPosRankSum=5.641;VQSLOD=3.1779;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:17,29:48:51.97:565,52,0	0/0:5,0:10:11.97:0,12,126	0/0:41,1:13:26.87:0,27,300	0/0:67,0:14:5.65:0,6,64	0/0:28,0:28:13.49:0,13,609	1/1:8,14:24:34.32:349,34,0	1/1:2,12:14:15.04:177,15,0	0/0:12,0:25:38.76:0,39,288	0/0:8,1:20:0.70:0,1,310	0/0:28,1:29:19.78:0,20,880	0/0:18,0:18:27.09:0,27,425	1/1:10,12:25:24.59:296,25,0	1/1:5,13:18:24.07:283,24,0	1/1:9,18:28:47.97:544,48,0	1/1:7,27:35:63.02:720,63,0	0/1:13,1:27:2.29:2,0,288	0/0:15,0:34:47.99:0,48,455	0/0:5,0:8:7.56:0,8,71	0/0:4,0:8:6.04:0,6,52	0/0:6,0:28:42.01:0,42,410	0/0:27,0:35:41.93:0,42,453	1/1:11,13:25:26.90:297,27,0	1/1:8,17:25:30.09:353,30,0	1/1:12,20:33:30.86:333,31,0	1/1:12,20:33:37.48:538,37,0	0/1:34,1:35:8.43:8,0,759	0/1:27,2:29:22.51:23,0,564	0/1:7,1:8:17.30:17,0,186
chr10	22236510	.	CTTT	C	8800.98	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=6.580;DP=555;FS=2.226;HRun=13;HaplotypeScore=99.1825;InbreedingCoeff=0.9901;MQ=75.43;MQ0=1;MQRankSum=-2.794;QD=24.18;ReadPosRankSum=5.999;VQSLOD=4.0400;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:42.04:0,42,732	0/0:7,0:9:24.04:0,24,392	0/0:31,0:19:38.41:0,38,496	0/0:23,0:19:10.95:0,11,275	1/1:2,0:25:58.44:348,58,0	1/1:1,16:17:36.10:434,36,0	1/1:6,5:13:29.95:314,30,0	1/1:8,20:29:58.36:696,58,0	0/0:22,0:22:54.14:0,54,886	1/1:5,18:23:63.07:744,63,0	1/1:1,19:20:45.01:547,45,0	1/1:2,11:13:27.04:328,27,0	1/1:6,20:27:44.98:512,45,0	1/1:3,15:19:36.02:419,36,0	1/1:3,1:22:50.05:322,50,0	1/1:4,23:28:46.44:581,46,0	0/0:22,0:22:54.18:0,54,957	0/0:9,0:12:33.09:0,33,544	0/0:11,0:12:24.05:0,24,396	0/0:24,0:27:66.20:0,66,1153	0/0:12,0:16:42.06:0,42,638	1/1:1,14:15:42.10:508,42,0	1/1:0,17:18:45.04:529,45,0	1/1:1,10:12:22.42:289,22,0	1/1:4,13:17:24.04:292,24,0	1/1:2,25:27:72.19:861,72,0	1/1:2,26:29:75.13:893,75,0	1/1:5,5:10:15.03:182,15,0
chr10	22237743	.	AAT	A	1008.75	PASS	AB=0.923;AC=5;AF=0.089;AN=56;BaseQRankSum=-3.164;DP=409;FS=0.617;HRun=0;HaplotypeScore=107.3044;InbreedingCoeff=0.7379;MQ=66.63;MQ0=13;MQRankSum=2.219;QD=19.78;ReadPosRankSum=0.121;VQSLOD=3.8452;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:44.71:0,45,351	0/0:4,0:4:8.70:0,9,59	0/0:17,0:15:44.72:0,45,385	0/0:16,0:10:26.89:0,27,264	0/0:13,0:13:14.68:0,15,83	0/0:15,0:14:16.78:0,17,125	0/0:18,0:18:50.83:0,51,414	1/1:13,14:27:64.21:632,64,0	0/0:9,0:9:12.81:0,13,91	0/1:11,0:12:15.62:254,0,16	1/1:8,1:9:21.04:252,21,0	0/0:12,0:12:28.05:0,28,219	0/0:17,0:15:34.02:0,34,233	0/0:9,0:9:23.79:0,24,168	0/0:15,0:15:32.01:0,32,264	0/0:11,0:11:18.08:0,18,136	0/0:16,0:15:26.48:0,26,195	0/0:14,0:13:19.46:0,19,140	0/0:10,0:10:23.29:0,23,204	0/0:16,0:16:37.73:0,38,300	0/0:16,0:16:33.07:0,33,258	0/0:9,0:9:26.64:0,27,201	0/0:17,0:17:23.93:0,24,196	0/0:24,0:21:32.86:0,33,258	0/0:13,0:12:32.91:0,33,268	0/0:15,0:14:35.49:0,35,269	0/0:22,0:19:51.43:0,51,357	0/0:10,0:10:25.67:0,26,155
chr10	22237744	.	ATGTGTGTGTGTG	A	2631.29	PASS	AB=0.821;AC=24;AF=0.571;AN=42;BaseQRankSum=3.458;DP=407;FS=10.911;HRun=0;HaplotypeScore=158.8360;InbreedingCoeff=0.2343;MQ=64.10;MQ0=13;MQRankSum=-2.150;QD=12.30;ReadPosRankSum=1.078;VQSLOD=2.1819;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:20:8.95:0,9,241	0/0:4,0:4:7.44:0,7,69	./.	./.	1/1:16,0:16:15.05:381,15,0	1/1:8,1:14:6.02:141,6,0	./.	0/0:29,0:29:15.04:0,15,342	0/1:4,0:9:32.87:62,0,33	0/1:12,0:12:11:11,0,244	0/0:12,0:9:14:0,14,134	1/1:8,4:12:6.02:202,6,0	1/1:9,6:14:15:421,15,0	./.	0/1:13,0:15:18.37:18,0,19	0/1:7,0:11:14.97:41,0,15	0/0:10,0:15:5.89:0,6,37	0/1:7,0:13:27.04:27,0,65	0/0:10,0:10:1.25:0,1,3	1/1:9,0:16:3.01:36,3,0	0/1:16,0:16:13:66,0,13	./.	1/1:12,5:17:0.47:1,0,0	./.	./.	1/1:12,0:14:12.04:367,12,0	1/1:13,0:17:18.06:551,18,0	1/1:5,0:10:15.05:454,15,0
chr10	22237765	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGAGA	T	1622.11	PASS	AB=1.000;AC=4;AF=0.071;AN=56;BaseQRankSum=2.936;DP=438;FS=2.570;HRun=0;HaplotypeScore=356.5716;InbreedingCoeff=0.2542;MQ=41.36;MQ0=33;MQRankSum=-3.873;QD=35.26;ReadPosRankSum=2.480;VQSLOD=1.1810;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:19:18.05:0,18,699	0/0:8,0:7:15.05:0,15,961	0/0:6,0:4:11.69:0,12,151	0/0:8,0:3:9.01:0,9,104	1/1:4,13:19:15.05:1673,15,0	0/0:18,0:17:15.05:0,15,947	0/0:17,0:17:19.82:0,20,549	0/0:26,0:26:75.22:0,75,3185	0/0:7,0:7:9.03:0,9,688	0/1:17,0:15:35.49:35,0,2825	0/0:21,0:18:17.97:0,18,1266	0/0:12,0:12:18.06:0,18,739	0/0:19,0:17:34.35:0,34,1741	0/0:15,0:14:3.01:0,3,380	0/0:13,0:13:11.90:0,12,661	0/0:12,0:11:15.05:0,15,734	0/0:19,0:17:21.07:0,21,1215	0/0:15,0:11:15.05:0,15,1118	0/0:6,0:6:18.06:0,18,1637	0/0:12,0:12:3.90:0,4,168	0/0:20,0:19:33.58:0,34,2167	0/0:18,0:18:24.08:0,24,1315	0/0:18,0:17:3.44:0,3,262	0/0:31,0:25:18.06:0,18,1801	0/0:7,0:6:3.01:0,3,172	0/0:22,0:18:54.19:0,54,3183	0/0:22,0:19:13.75:0,14,2631	0/1:10,0:7:23.97:24,0,464
chr10	22237791	.	TGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA	T	932.06	PASS	AB=0.800;AC=5;AF=0.104;AN=48;BaseQRankSum=3.167;DP=428;FS=0.000;HRun=0;HaplotypeScore=237.1337;InbreedingCoeff=0.3716;MQ=37.76;MQ0=35;MQRankSum=-2.181;QD=17.26;ReadPosRankSum=2.790;VQSLOD=1.9838;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:16:1.55:4,2,0	0/0:7,0:6:5.51:0,6,289	./.	./.	1/1:22,0:22:15.05:671,15,0	0/0:20,0:19:12.04:0,12,875	0/0:21,0:20:7.53:0,8,474	0/0:18,0:18:17.86:0,18,126	0/0:9,0:9:3.48:0,3,395	0/1:12,1:14:99:359,0,287	0/0:16,1:17:3.07:0,3,11	0/0:12,0:12:14.60:0,15,1223	0/0:21,0:19:25.86:0,26,1502	0/0:22,0:21:12.93:0,13,1278	./.	./.	0/0:16,0:14:12.04:0,12,1178	0/0:17,0:13:12.04:0,12,841	0/0:7,0:6:15.05:0,15,1279	0/0:15,0:15:2.80:0,3,7	0/0:15,0:13:12.04:0,12,1424	0/0:19,0:19:12.04:0,12,1223	0/0:16,0:15:4.28:0,4,626	0/0:34,0:26:21.07:0,21,2295	0/0:10,0:9:3.01:0,3,367	0/0:23,0:19:54.18:0,54,4862	0/0:24,0:21:42.26:0,42,3058	0/0:10,0:7:12.03:0,12,253
chr10	22237869	.	TC	T	1581.25	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=6.211;DP=513;FS=5.515;HRun=2;HaplotypeScore=78.8403;InbreedingCoeff=0.9964;MQ=75.03;MQ0=1;MQRankSum=-0.679;QD=31.63;ReadPosRankSum=2.476;VQSLOD=3.5158;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:60.16:0,60,870	0/0:10,0:10:30.10:0,30,442	0/0:15,0:13:36.05:0,36,512	0/0:13,0:13:20.57:0,21,322	0/0:33,0:33:81.26:0,81,1188	0/0:13,0:13:39.09:0,39,559	0/0:27,0:27:80.48:0,80,1172	0/0:33,0:33:96.33:0,96,1438	0/0:9,0:9:24.07:0,24,339	0/0:21,0:20:60.20:0,60,898	0/0:23,0:23:51.16:0,51,743	0/0:11,0:11:33.10:0,33,474	0/0:22,0:22:66.16:0,66,915	0/0:16,0:16:48.16:0,48,718	0/0:16,0:16:45.09:0,45,611	0/0:11,0:11:33.10:0,33,476	0/0:15,0:15:45.15:0,45,673	0/0:10,0:10:27.06:0,27,369	0/0:13,0:13:39.11:0,39,562	0/0:30,0:30:90.26:0,90,1282	0/0:16,0:16:45.12:0,45,633	0/0:20,0:20:60.18:0,60,857	0/0:21,0:21:63.21:0,63,942	0/0:27,0:27:63.16:0,63,915	0/0:17,0:17:48.16:0,48,718	1/1:2,19:21:35.22:714,35,0	1/1:0,20:20:51.16:659,51,0	1/1:0,9:9:27.09:350,27,0
chr10	22239432	.	A	AT	1536.82	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-6.726;DP=606;FS=11.681;HRun=8;HaplotypeScore=96.5353;InbreedingCoeff=0.9821;MQ=78.96;MQ0=0;MQRankSum=-0.125;QD=30.13;ReadPosRankSum=1.414;VQSLOD=2.4762;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:64.43:0,64,562	0/0:16,0:16:42.02:0,42,384	0/0:16,0:17:41.93:0,42,367	0/0:13,0:14:38.20:0,38,326	0/0:36,0:36:96.04:0,96,879	0/0:22,0:22:63.03:0,63,576	0/0:18,0:18:50.98:0,51,452	0/0:27,0:27:66.03:0,66,604	0/0:19,0:20:53.01:0,53,458	0/0:36,0:35:93.04:0,93,848	0/0:30,0:30:81.03:0,81,741	0/0:16,0:16:48:0,48,433	0/0:21,0:21:51:0,51,462	0/0:28,0:28:84.03:0,84,763	1/1:1,28:29:78.23:897,78,0	1/1:0,22:22:66.20:762,66,0	0/0:21,0:21:56.98:0,57,508	0/0:9,0:9:27.01:0,27,247	0/0:19,0:19:56.83:0,57,507	0/0:30,0:30:87.03:0,87,791	0/0:21,0:21:60.01:0,60,544	0/0:21,0:21:60.03:0,60,549	0/0:14,0:14:39.02:0,39,357	0/0:9,0:9:27.01:0,27,247	0/0:9,0:9:24:0,24,215	0/0:35,0:36:95.06:0,95,853	0/0:35,0:35:90:0,90,812	0/0:4,0:4:12.01:0,12,110
chr10	22240335	.	AT	A	2225.88	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=11.606;DP=673;FS=1.361;HRun=8;HaplotypeScore=66.3846;InbreedingCoeff=0.9195;MQ=73.86;MQ0=0;MQRankSum=-0.071;QD=19.19;ReadPosRankSum=1.600;VQSLOD=3.5743;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:90.21:0,90,1045	0/0:13,0:13:30.06:0,30,339	0/0:22,0:19:43.36:0,43,522	0/1:18,0:17:0.87:1,0,263	1/1:0,27:27:68.66:600,69,0	0/0:28,0:28:75.21:0,75,893	0/0:20,0:20:57.17:0,57,689	0/0:31,0:31:75.22:0,75,896	0/0:17,0:17:45.11:0,45,521	0/0:44,0:44:99:0,117,1394	0/0:24,0:24:72.20:0,72,848	0/0:15,0:15:42.09:0,42,472	0/0:23,0:23:57.17:0,57,688	0/0:24,0:24:63.16:0,63,730	0/0:33,0:33:87.23:0,87,1025	0/0:20,0:20:57.17:0,57,688	0/0:23,0:23:60.13:0,60,684	0/0:15,0:15:42.03:0,42,461	0/0:25,0:25:75.18:0,75,881	0/0:33,0:33:93.22:0,93,1079	0/0:21,0:21:63.19:0,63,761	0/0:26,0:26:66.16:0,66,754	0/0:25,0:25:69.20:0,69,822	0/0:14,0:14:36.07:0,36,398	0/0:31,0:31:90.24:0,90,1054	1/1:3,30:33:89.98:827,90,0	1/1:0,33:33:84.14:811,84,0	1/1:0,5:5:15.02:145,15,0
chr10	22240936	.	A	ATG	802.10	PASS	AB=0.968;AC=17;AF=0.327;AN=52;BaseQRankSum=-5.158;DP=617;FS=0.000;HRun=0;HaplotypeScore=113.1712;InbreedingCoeff=0.2423;MQ=72.78;MQ0=16;MQRankSum=4.092;QD=2.70;ReadPosRankSum=-1.712;VQSLOD=2.1626;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:9.02:0,9,96	0/0:11,0:15:11.19:0,11,56	./.	0/1:34,0:24:0.21:0,0,0	0/1:19,2:20:23.26:77,0,23	1/1:13,6:19:3.01:44,3,0	0/1:18,0:18:17.34:37,0,17	0/1:25,0:24:0:0,0,0	0/0:11,0:15:6.57:0,7,30	0/0:20,0:20:4.94:0,5,24	0/0:10,0:12:5.68:0,6,28	1/1:25,0:24:12.50:121,12,0	1/1:10,3:15:9.50:129,10,0	0/1:26,5:31:16.78:77,0,17	0/0:20,0:25:15.76:0,16,75	0/0:12,0:17:8.99:0,9,43	0/0:26,0:26:2.67:0,3,14	0/0:8,0:9:4.66:0,5,19	0/0:17,0:17:2.84:0,3,14	0/0:16,0:20:11.35:0,11,56	./.	0/1:19,0:19:22.93:58,0,23	0/1:22,0:22:23.12:56,0,23	1/1:24,15:42:21.07:308,21,0	1/1:18,6:25:2.91:44,3,0	0/0:23,0:25:1.35:0,1,12	0/0:11,0:16:13.87:0,14,70	0/0:9,0:7:2.50:0,2,9
chr10	22240999	.	GA	G	7815.80	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=7.995;DP=502;FS=3.707;HRun=4;HaplotypeScore=61.7289;InbreedingCoeff=0.9975;MQ=78.84;MQ0=1;MQRankSum=-2.216;QD=32.03;ReadPosRankSum=0.766;VQSLOD=5.4119;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:72.20:0,72,984	1/1:0,11:11:30.09:358,30,0	0/0:20,0:18:51.16:0,51,658	0/0:22,0:21:22.92:0,23,625	1/1:0,21:21:57.17:681,57,0	0/0:22,0:21:66.21:0,66,909	0/0:7,0:7:21.07:0,21,294	1/1:0,23:23:66.19:780,66,0	1/1:0,21:21:57.17:683,57,0	1/1:1,18:19:54.16:648,54,0	1/1:0,20:20:54.16:648,54,0	0/0:14,0:14:42.13:0,42,572	0/0:17,0:17:42.12:0,42,570	0/0:19,0:19:48.15:0,48,654	1/1:0,16:16:42.13:504,42,0	1/1:0,18:18:48.15:576,48,0	1/1:0,27:27:60.18:717,60,0	1/1:1,6:7:18.06:216,18,0	1/1:0,15:15:42.13:502,42,0	1/1:1,22:23:63.19:747,63,0	1/1:1,22:23:63.19:755,63,0	0/0:12,0:12:36.11:0,36,488	0/0:12,0:12:33.11:0,33,461	0/0:26,0:26:51.17:0,51,714	0/0:16,0:16:36.09:0,36,468	0/0:17,0:17:48.15:0,48,657	0/0:21,0:21:63.12:0,63,837	0/0:8,0:8:24.08:0,24,336
chr10	22241202	.	T	TGAAGAA	12547.62	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=7.543;DP=712;FS=1.556;HRun=0;HaplotypeScore=195.3422;InbreedingCoeff=0.9333;MQ=84.38;MQ0=0;MQRankSum=-7.771;QD=20.21;ReadPosRankSum=1.434;VQSLOD=4.4497;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:88.28:0,88,2184	1/1:3,0:8:8.87:57,9,0	0/0:26,0:25:52.83:0,53,811	0/0:23,0:23:40.83:0,41,838	1/1:1,0:31:85.73:553,86,0	1/1:1,0:31:67.99:439,68,0	1/1:2,0:17:38.44:249,38,0	1/1:8,0:37:92.05:708,92,0	1/1:2,0:29:64.29:444,64,0	1/1:3,0:25:59.21:403,59,0	1/1:1,0:25:62.14:425,62,0	1/1:1,0:28:62.09:402,62,0	1/1:5,0:31:65.02:420,65,0	1/1:2,0:25:62.13:427,62,0	1/1:4,0:32:73.85:475,74,0	1/1:5,0:27:47.17:306,47,0	1/1:2,0:29:67.98:439,68,0	1/1:1,0:9:11.82:76,12,0	1/1:8,0:24:57.08:533,57,0	1/1:4,0:35:91.87:680,92,0	1/1:3,0:24:47.37:327,47,0	1/1:2,0:24:65.03:420,65,0	1/1:3,0:17:38.43:250,38,0	1/1:3,0:28:49.51:324,50,0	1/1:4,0:23:47.33:308,47,0	1/1:8,21:31:74.99:1843,75,0	1/1:7,16:25:54.19:1832,54,0	1/1:0,4:4:6.02:205,6,0
chr10	22241913	.	A	AT	17871.91	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-10.296;DP=627;FS=7.744;HRun=5;HaplotypeScore=59.3642;InbreedingCoeff=0.9714;MQ=75.45;MQ0=0;MQRankSum=-3.629;QD=34.44;ReadPosRankSum=3.376;VQSLOD=5.0490;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:27.04:0,27,277	1/1:0,7:7:15.05:197,15,0	0/0:22,0:22:56.26:0,56,593	0/0:17,0:15:38.99:0,39,386	1/1:1,30:31:84.27:1105,84,0	1/1:0,36:36:99:1342,102,0	1/1:1,22:23:57.19:750,57,0	1/1:4,31:35:93.27:1187,93,0	1/1:2,22:24:66.21:868,66,0	1/1:3,23:26:72.22:930,72,0	1/1:2,25:27:69.22:906,69,0	1/1:0,19:19:45.15:592,45,0	1/1:2,29:31:81.26:1063,81,0	1/1:1,21:22:54.18:710,54,0	1/1:0,20:20:57.18:748,57,0	1/1:2,27:29:75.24:987,75,0	1/1:1,11:12:30.10:395,30,0	1/1:0,6:6:18.06:237,18,0	1/1:2,25:27:72.20:904,72,0	1/1:2,31:34:93.26:1201,93,0	1/1:1,11:12:30.10:395,30,0	1/1:2,30:32:84.27:1105,84,0	1/1:0,34:34:96.31:1263,96,0	1/1:3,12:15:36.12:474,36,0	1/1:1,16:17:39.13:513,39,0	0/0:22,1:23:17.66:0,18,541	0/0:31,0:31:90.22:0,90,967	0/0:3,0:3:6.01:0,6,64
chr10	22242157	.	TC	T	13543.96	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=10.669;DP=642;FS=4.617;HRun=6;HaplotypeScore=102.8778;InbreedingCoeff=0.9864;MQ=86.57;MQ0=0;MQRankSum=-4.973;QD=26.45;ReadPosRankSum=6.483;VQSLOD=4.2971;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:60.20:0,60,790	1/1:0,6:6:18.05:193,18,0	0/0:23,0:23:61.64:0,62,709	0/0:22,0:22:57.10:0,57,650	1/1:1,25:26:60.04:617,60,0	1/1:1,21:22:54.14:580,54,0	1/1:2,20:21:51.13:548,51,0	1/1:5,30:35:87.21:927,87,0	1/1:0,22:22:57.14:612,57,0	1/1:2,24:26:72.17:765,72,0	1/1:0,19:19:48.12:515,48,0	1/1:1,27:28:69.17:741,69,0	1/1:0,21:21:51.13:548,51,0	1/1:2,32:34:78.19:838,78,0	1/1:1,20:21:48.12:516,48,0	1/1:2,24:26:66.16:708,66,0	1/1:1,13:14:39.06:406,39,0	1/1:1,11:12:33.04:342,33,0	1/1:0,14:14:42.11:451,42,0	1/1:4,39:43:99:1091,105,0	1/1:2,21:23:54.13:580,54,0	1/1:2,23:25:69.04:724,69,0	1/1:3,24:27:60.06:618,60,0	1/1:1,20:22:54.13:580,54,0	1/1:2,22:24:60.15:644,60,0	0/0:27,0:27:78.25:0,78,1024	0/0:33,0:32:84.23:0,84,1067	0/0:3,0:3:9.03:0,9,118
chr10	22242878	.	GACAACA	G	26917.58	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=15.367;DP=576;FS=5.910;HRun=0;HaplotypeScore=189.5843;InbreedingCoeff=0.9676;MQ=76.11;MQ0=3;MQRankSum=-16.916;QD=64.40;ReadPosRankSum=1.995;VQSLOD=4.5106;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:96.33:0,96,3504	1/1:0,1:6:18.06:436,18,0	0/0:21,0:21:59.98:0,60,1947	0/0:27,0:27:81.27:0,81,2759	1/1:0,39:39:93.27:2199,93,0	1/1:0,26:26:72.25:1839,72,0	1/1:0,18:18:45.15:1111,45,0	1/1:0,0:15:45.15:1073,45,0	1/1:1,0:16:43:1076,43,0	1/1:0,0:15:45.15:1072,45,0	1/1:2,0:24:53.22:1417,53,0	1/1:0,21:21:57.20:1458,57,0	1/1:0,25:25:66.23:1648,66,0	1/1:0,21:21:60.21:1533,60,0	1/1:1,0:20:60.20:1398,60,0	1/1:2,0:20:57.15:1315,57,0	1/1:1,0:11:30.10:719,30,0	1/1:0,0:2:6.02:144,6,0	1/1:1,0:21:57.20:1358,57,0	1/1:4,0:23:57.83:1377,58,0	1/1:1,0:7:10.10:167,10,0	1/1:0,25:25:72.25:1761,72,0	1/1:0,21:21:57.20:1457,57,0	1/1:0,13:13:23.79:614,24,0	1/1:0,26:26:72.20:1745,72,0	0/0:33,0:34:30.79:0,31,3638	0/0:32,0:32:96.33:0,96,3601	0/0:12,0:12:36.12:0,36,1332
chr10	22242879	.	ACAACAGT	A	19714.19	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=16.788;DP=570;FS=6.674;HRun=0;HaplotypeScore=223.9661;InbreedingCoeff=0.9701;MQ=76.31;MQ0=3;MQRankSum=-16.872;QD=47.73;ReadPosRankSum=1.785;VQSLOD=4.0843;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:96.33:0,96,3822	1/1:1,5:6:18.06:353,18,0	0/0:20,0:20:56.68:0,57,1956	0/0:26,0:26:78.27:0,78,2975	1/1:39,0:39:89.95:1377,90,0	1/1:26,0:26:72.25:1194,72,0	1/1:18,0:18:45.07:710,45,0	1/1:0,15:15:45.15:954,45,0	1/1:1,15:16:45.15:897,45,0	1/1:1,14:15:45.15:965,45,0	1/1:2,21:23:60.17:1168,60,0	1/1:21,0:21:57.19:934,57,0	1/1:25,0:25:66.14:1057,66,0	1/1:21,0:21:60.21:989,60,0	1/1:1,19:20:60.20:1164,60,0	1/1:2,18:19:57.16:1102,57,0	1/1:0,10:10:30.10:595,30,0	1/1:0,2:2:6.02:123,6,0	1/1:1,20:21:60.17:1239,60,0	1/1:4,17:21:60.20:1165,60,0	1/1:3,5:7:11.51:143,12,0	1/1:25,0:25:72.03:1117,72,0	1/1:21,0:21:57.19:941,57,0	1/1:13,0:13:23.89:393,24,0	1/1:26,0:26:69.24:1134,69,0	0/0:33,1:34:39.77:0,40,3986	0/0:33,0:33:99:0,99,4124	0/0:12,0:12:36.12:0,36,1470
chr10	22242886	.	T	TA	6666.39	PASS	AB=0.979;AC=30;AF=0.536;AN=56;BaseQRankSum=0.576;DP=630;FS=19.880;HRun=0;HaplotypeScore=231.0185;InbreedingCoeff=0.4647;MQ=78.57;MQ0=0;MQRankSum=-12.892;QD=16.54;ReadPosRankSum=-3.812;VQSLOD=2.5829;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:96.32:0,96,1341	1/1:9,0:9:16.81:188,17,0	0/0:20,0:20:45.13:0,45,576	0/0:30,0:30:82.51:0,83,1079	0/1:41,0:41:14.35:58,0,14	0/0:27,0:27:19.10:0,19,47	0/1:18,0:18:1.43:1,0,16	1/1:18,5:23:69.20:846,69,0	1/1:18,0:18:54.08:547,54,0	1/1:15,1:16:48.13:555,48,0	1/1:24,0:24:63.05:604,63,0	0/1:22,0:22:18.41:21,0,18	0/1:31,0:31:11.76:76,0,12	0/0:22,0:22:6.34:0,6,22	1/1:23,0:23:66.10:644,66,0	1/1:18,0:18:54.08:518,54,0	1/1:12,1:13:39.07:422,39,0	0/1:4,1:5:7.93:96,0,8	1/1:28,0:28:81.23:950,81,0	1/1:23,3:26:66.12:714,66,0	1/1:8,1:9:24.06:303,24,0	0/1:24,0:24:11.19:11,0,19	0/1:25,0:25:7.41:73,0,7	0/0:14,0:14:7.17:0,7,18	0/1:30,0:30:17.05:39,0,17	0/0:34,0:34:70.96:0,71,1338	0/0:35,0:35:99:0,105,1469	0/0:12,0:12:36.12:0,36,500
chr10	22243722	.	GA	G	14316.71	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=9.874;DP=600;FS=1.752;HRun=5;HaplotypeScore=89.9138;InbreedingCoeff=0.9976;MQ=76.37;MQ0=1;MQRankSum=-4.487;QD=30.53;ReadPosRankSum=2.034;VQSLOD=5.3383;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:25:51.11:0,51,659	1/1:0,6:6:18.05:204,18,0	0/0:18,0:18:45.15:0,45,606	0/0:21,0:21:50.71:0,51,702	1/1:2,31:33:87.24:986,87,0	1/1:2,35:37:99:1157,102,0	1/1:1,14:15:36.10:408,36,0	1/1:1,22:23:66.14:719,66,0	1/1:1,21:22:57.16:647,57,0	1/1:0,17:17:51.15:579,51,0	1/1:2,21:23:63.18:715,63,0	1/1:2,17:19:51.12:566,51,0	1/1:3,22:25:66.19:748,66,0	1/1:1,32:33:96.27:1089,96,0	1/1:0,20:20:57.16:647,57,0	1/1:1,26:27:75.21:851,75,0	1/1:0,22:22:54.15:613,54,0	1/1:0,9:9:24.07:272,24,0	1/1:1,25:26:75.15:816,75,0	1/1:2,25:27:72.21:817,72,0	1/1:2,20:22:57.16:646,57,0	1/1:2,14:16:39.11:442,39,0	1/1:3,18:21:51.15:579,51,0	1/1:0,11:11:30.09:340,30,0	1/1:1,14:15:42.12:477,42,0	0/0:24,1:25:35.19:0,35,869	0/0:32,0:32:93.29:0,93,1241	0/0:9,0:9:27.09:0,27,369
chr10	22244084	.	T	TA	1601.16	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-3.579;DP=410;FS=2.539;HRun=4;HaplotypeScore=73.9632;InbreedingCoeff=0.8659;MQ=62.59;MQ0=0;MQRankSum=-1.881;QD=24.63;ReadPosRankSum=-1.456;VQSLOD=2.2646;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:75.19:0,75,832	0/0:11,0:11:28.82:0,29,155	0/0:10,0:8:21.49:0,21,225	0/0:17,0:15:38.23:0,38,344	0/0:15,0:15:34.97:0,35,180	0/0:11,0:11:31.91:0,32,180	0/0:6,0:6:17.55:0,18,110	0/0:25,0:25:35.55:0,36,258	0/0:9,0:9:23.18:0,23,131	0/0:15,0:16:38.58:0,39,182	0/0:18,0:18:20.93:0,21,193	0/0:8,0:8:20.12:0,20,108	0/0:9,0:9:25.63:0,26,139	0/0:9,0:8:18.26:0,18,102	0/0:11,0:11:28.86:0,29,164	0/0:10,0:10:10.96:0,11,62	0/0:18,0:18:34.67:0,35,201	0/0:14,0:14:25.34:0,25,145	0/0:28,1:29:31.21:0,31,325	0/0:22,0:22:49.91:0,50,267	0/0:9,0:9:19.82:0,20,109	0/0:4,0:4:8.56:0,9,44	0/0:13,0:13:0.84:0,1,101	0/0:5,0:5:12.26:0,12,54	0/0:18,0:18:18.48:0,18,170	1/1:1,22:23:55.92:658,56,0	1/1:2,23:24:57.14:689,57,0	1/1:2,15:17:32.64:396,33,0
chr10	22244087	.	AAT	A	249.41	PASS	AB=0.946;AC=13;AF=0.232;AN=56;BaseQRankSum=2.358;DP=409;FS=1.072;HRun=0;HaplotypeScore=84.7920;InbreedingCoeff=0.1589;MQ=62.63;MQ0=0;MQRankSum=1.027;QD=1.74;ReadPosRankSum=-5.456;VQSLOD=0.2273;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:75.24:0,75,1235	0/0:11,0:11:5.98:0,6,187	0/0:10,0:8:20.99:0,21,314	0/0:17,1:16:18.71:0,19,516	0/0:13,0:13:36.18:0,36,248	0/0:11,0:11:32.81:0,33,244	0/0:6,0:6:17.78:0,18,126	0/0:25,0:25:20.56:0,21,322	0/0:10,0:10:4.92:0,5,154	0/0:15,0:15:20.25:0,20,229	0/1:20,0:20:25.91:26,0,246	0/0:7,0:7:20.69:0,21,140	0/0:9,0:9:26.52:0,27,187	0/1:9,1:9:16.11:16,0,112	0/0:12,0:12:6.36:0,6,195	0/1:8,0:8:12.88:13,0,71	0/0:18,0:18:18.74:0,19,245	0/0:14,0:14:3.38:0,3,168	0/0:28,0:28:41.58:0,42,460	0/0:21,0:21:4.93:0,5,311	0/0:10,0:10:0.77:0,1,126	0/1:5,0:5:15.81:16,0,49	0/1:13,0:13:51.69:52,0,134	0/1:3,2:5:46.95:77,0,47	0/1:19,0:19:45.14:45,0,208	1/1:22,0:22:32.30:122,32,0	1/1:24,0:24:4.79:17,5,0	1/1:17,0:17:11.03:25,11,0
chr10	22244232	.	A	AAAAAAACCAAAAGAACC	19357.99	PASS	AB=1.000;AC=48;AF=0.857;AN=56;BaseQRankSum=-1.566;DP=405;FS=3.290;HRun=0;HaplotypeScore=154.7100;InbreedingCoeff=0.3815;MQ=33.10;MQ0=14;MQRankSum=-3.001;QD=55.31;ReadPosRankSum=5.705;VQSLOD=4.4012;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:35:69.36:0,69,1195	1/1:8,0:8:8.94:353,9,0	0/0:10,0:1:3:0,3,27	0/0:9,0:4:3:0,3,28	0/1:18,0:16:76.20:76,0,197	1/1:18,0:15:21:738,21,0	1/1:12,0:11:19.34:748,19,0	1/1:24,0:24:54.03:1836,54,0	1/1:11,0:10:18.06:746,18,0	1/1:20,0:16:42.11:1387,42,0	1/1:19,0:18:38.16:1159,38,0	1/1:13,0:11:26.43:964,26,0	1/1:9,0:8:0.41:584,0,0	1/1:17,0:11:27.05:1100,27,0	1/1:17,0:14:30.07:1080,30,0	1/1:9,0:8:3.01:184,3,0	1/1:11,0:8:2.92:175,3,0	1/1:7,0:5:8.06:411,8,0	0/1:13,0:11:7.35:902,0,7	1/1:17,0:15:4.35:182,4,0	1/1:5,0:5:2.89:66,3,0	1/1:11,1:12:15:872,15,0	1/1:8,7:18:17.11:932,17,0	1/1:4,0:4:6.02:72,6,0	1/1:15,0:14:26.78:1095,27,0	1/1:22,0:21:50.98:1591,51,0	1/1:22,0:21:10.37:1559,10,0	1/1:8,0:8:17.97:548,18,0
chr10	22244234	.	A	AAAAACCAAAAGAACC	20477.76	PASS	AB=0.992;AC=44;AF=0.786;AN=56;BaseQRankSum=-1.976;DP=436;FS=10.276;HRun=0;HaplotypeScore=162.8196;InbreedingCoeff=0.1749;MQ=33.73;MQ0=14;MQRankSum=-4.163;QD=54.17;ReadPosRankSum=8.157;VQSLOD=2.8819;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:35:81.27:0,81,1540	1/1:6,2:9:12.51:604,13,0	0/0:11,0:1:2.84:0,3,14	0/0:11,0:4:6.02:0,6,79	0/1:19,0:17:51.17:51,0,295	1/1:20,0:17:6.15:862,6,0	0/1:14,0:13:26.34:700,0,26	1/1:25,0:25:56.72:1924,57,0	1/1:7,5:13:20.87:864,21,0	1/1:20,0:16:45.15:1559,45,0	1/1:18,0:19:40.68:1251,41,0	0/1:13,0:11:11.28:860,0,11	0/1:10,0:9:55.56:506,0,56	1/1:17,0:11:27.05:963,27,0	1/1:17,0:17:30.92:1134,31,0	1/1:2,7:9:6.02:365,6,0	1/1:6,1:10:2.92:195,3,0	1/1:5,0:5:6.47:404,6,0	0/1:19,0:17:35.62:1070,0,36	1/1:20,0:18:5.17:351,5,0	1/1:5,0:5:2.89:66,3,0	1/1:5,5:13:15:814,15,0	1/1:18,0:17:16.05:822,16,0	1/1:4,0:4:6.02:72,6,0	1/1:17,0:16:2.61:1170,3,0	1/1:21,0:20:51.03:1658,51,0	0/1:22,0:21:3.45:1662,0,3	1/1:8,0:8:17.94:551,18,0
chr10	22244235	.	A	AAAACCAAAAGAACC	21132.02	PASS	AB=0.947;AC=42;AF=0.750;AN=56;BaseQRankSum=-1.092;DP=452;FS=12.764;HRun=0;HaplotypeScore=171.4556;InbreedingCoeff=0.0820;MQ=33.72;MQ0=14;MQRankSum=-4.923;QD=53.63;ReadPosRankSum=9.550;VQSLOD=2.1338;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:34:84.73:0,85,1710	1/1:8,0:8:11.80:529,12,0	0/0:12,0:1:2.98:0,3,22	0/0:11,0:4:6.02:0,6,89	0/1:18,0:16:44.40:44,0,337	1/1:19,0:16:4.12:795,4,0	0/1:14,0:13:74.12:633,0,74	1/1:26,0:26:39.43:1951,39,0	1/1:13,0:12:1.10:692,1,0	1/1:27,0:24:59.16:2320,59,0	1/1:22,0:22:39.88:1239,40,0	0/1:11,0:11:28.69:845,0,29	0/1:11,0:10:99:441,0,100	1/1:17,0:11:27.05:893,27,0	1/1:26,0:24:33.01:1430,33,0	1/1:8,1:8:6.02:329,6,0	1/1:10,0:7:3.39:175,3,0	1/1:5,0:5:11.63:429,12,0	0/1:26,0:23:99:1407,0,119	0/1:10,6:19:14.42:343,0,14	1/1:3,1:4:2.94:49,3,0	1/1:11,0:11:15.05:744,15,0	1/1:17,0:16:15.44:748,15,0	1/1:4,0:4:6.02:72,6,0	0/1:17,0:16:15.16:1055,0,15	1/1:22,0:21:53.99:1704,54,0	0/1:22,0:21:2.65:1710,0,3	1/1:8,0:8:17.86:557,18,0
chr10	22244236	.	A	ACC	720.45	PASS	AB=0.977;AC=16;AF=0.286;AN=56;BaseQRankSum=10.550;DP=463;FS=2.933;HRun=0;HaplotypeScore=106.1479;InbreedingCoeff=-0.2241;MQ=34.01;MQ0=14;MQRankSum=-3.173;QD=2.79;ReadPosRankSum=7.897;VQSLOD=1.2532;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:35:89.43:0,89,1170	0/1:7,1:8:42.41:42,0,45	0/0:13,0:1:2.60:0,3,10	0/0:11,0:4:8.96:0,9,100	0/0:18,0:16:37.52:0,38,386	0/0:19,0:16:1.44:0,1,127	0/0:15,0:14:21.64:0,22,253	0/1:25,2:27:53.86:170,0,54	0/1:13,0:12:25.62:26,0,110	0/1:33,1:30:54.41:224,0,54	1/1:27,1:27:2.56:117,3,0	0/0:12,0:11:11.27:0,11,158	0/0:11,0:10:26.11:0,26,303	0/0:18,0:12:25.19:0,25,253	0/1:27,0:24:54.40:54,0,168	1/1:9,0:8:3.26:10,3,0	0/0:10,0:7:1.69:0,2,17	0/1:6,0:5:5.93:6,0,27	0/1:26,1:24:78.29:78,0,337	0/1:17,0:15:20.68:21,0,74	0/0:3,0:3:3.01:0,3,30	0/1:11,0:11:25.47:25,0,28	0/0:16,0:15:16.04:0,16,181	0/0:5,0:5:5.64:0,6,27	0/0:18,0:17:1.82:0,2,273	0/1:20,0:19:25.63:58,0,26	0/1:22,0:21:24.97:25,0,71	0/1:8,0:8:11.28:11,0,45
chr10	22244237	.	A	ACCC	1898.48	PASS	AB=0.955;AC=21;AF=0.375;AN=56;BaseQRankSum=10.015;DP=460;FS=4.972;HRun=0;HaplotypeScore=104.2554;InbreedingCoeff=-0.3354;MQ=34.77;MQ0=14;MQRankSum=-4.680;QD=5.91;ReadPosRankSum=8.022;VQSLOD=1.2761;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:36:92.77:0,93,1453	0/1:8,0:8:0.36:0,0,74	0/0:14,0:2:3.01:0,3,35	0/0:11,0:4:9.03:0,9,140	0/0:18,0:16:39.46:0,39,544	0/1:18,0:16:89.05:89,0,153	0/1:15,0:14:26.33:26,0,299	0/1:19,5:23:99:300,0,135	0/0:13,0:12:12.21:0,12,202	0/1:25,8:29:99:455,0,137	0/1:21,5:25:62.78:360,0,63	0/1:11,0:10:52.66:53,0,189	0/0:11,0:10:13.65:0,14,403	0/1:18,0:12:30.45:30,0,275	0/1:26,0:24:5.05:5,0,318	1/1:11,0:10:5.20:25,5,0	1/1:11,0:8:2.33:17,2,0	0/1:5,0:5:30.39:35,0,30	0/1:28,0:25:58.79:59,0,496	0/0:16,0:14:10.36:0,10,112	0/0:3,0:3:3.01:0,3,37	0/1:11,0:11:35.64:36,0,49	0/0:16,0:15:7.35:0,7,195	0/1:5,0:5:13.10:26,0,13	0/1:18,0:17:27.10:27,0,387	0/1:21,0:20:2.61:188,0,3	0/1:22,0:21:99:222,0,109	0/1:7,0:7:29.42:99,0,29
chr10	22244238	.	A	ACC	2193.34	PASS	AB=0.886;AC=24;AF=0.429;AN=56;BaseQRankSum=9.773;DP=459;FS=12.869;HRun=0;HaplotypeScore=87.0278;InbreedingCoeff=-0.3162;MQ=36.86;MQ0=14;MQRankSum=-3.383;QD=6.28;ReadPosRankSum=5.502;VQSLOD=1.4469;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:35:89.52:0,90,1185	0/1:8,0:8:5.02:5,0,139	0/0:14,0:2:6:0,6,61	0/0:12,0:5:10.58:0,11,125	0/0:18,0:16:38.74:0,39,401	0/1:9,10:16:99:124,0,168	0/1:14,2:15:47.22:47,0,291	0/1:25,0:24:99:118,0,248	0/0:12,0:11:17.98:0,18,236	0/1:34,0:30:99:175,0,316	0/1:26,0:25:99:155,0,175	0/1:8,3:11:99:105,0,189	0/1:10,1:10:13.21:13,0,326	0/1:14,4:12:82.85:83,0,221	0/1:20,7:24:28.46:28,0,406	0/1:10,0:9:7.84:8,0,72	1/1:6,4:8:5.69:36,6,0	0/1:6,0:5:26.63:43,0,27	0/1:26,2:25:81.96:82,0,583	0/0:16,0:14:14.41:0,14,166	0/0:2,0:2:3.01:0,3,37	0/1:11,0:11:49.14:61,0,49	0/1:15,0:14:0.77:1,0,141	0/1:3,2:5:28.01:63,0,28	0/1:16,2:17:48.44:48,0,403	1/1:15,6:20:55.65:524,56,0	1/1:11,11:21:14.58:468,15,0	0/1:2,5:7:12.50:173,0,12
chr10	22244239	.	A	ACC	715.21	PASS	AB=0.982;AC=11;AF=0.196;AN=56;BaseQRankSum=9.397;DP=461;FS=10.761;HRun=0;HaplotypeScore=81.5640;InbreedingCoeff=0.1297;MQ=37.11;MQ0=14;MQRankSum=-3.449;QD=5.50;ReadPosRankSum=2.397;VQSLOD=2.0353;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:35:90.21:0,90,1184	0/0:8,0:8:12.93:0,13,159	0/0:14,0:2:6.02:0,6,81	0/0:12,0:5:10.56:0,11,119	0/0:18,0:16:39.16:0,39,408	0/1:19,0:16:9.61:10,0,171	0/0:16,0:15:5.77:0,6,324	0/0:25,0:24:28.85:0,29,435	0/0:12,0:11:20.90:0,21,253	0/0:35,0:31:40.72:0,41,716	0/1:26,0:25:6.25:6,0,277	0/1:12,0:11:35.07:35,0,228	0/0:11,0:10:12.73:0,13,343	0/0:18,0:12:0.59:0,1,225	0/0:27,0:24:33.86:0,34,546	0/0:10,0:9:9.91:0,10,117	0/1:10,0:8:10.69:11,0,17	0/1:6,0:5:4.69:5,0,38	0/0:28,0:25:37.22:0,37,795	0/0:16,0:14:15.02:0,15,180	0/0:2,0:2:3.01:0,3,39	0/0:11,0:11:3.66:0,4,67	0/0:15,0:14:19.54:0,20,197	0/1:5,0:5:20.88:21,0,35	0/0:17,0:16:2.62:0,3,415	1/1:10,8:22:54.21:431,54,0	1/1:17,0:21:38.19:295,38,0	0/1:6,0:7:14.42:51,0,14
chr10	22244242	.	A	AGAACC	2075.88	PASS	AB=0.922;AC=18;AF=0.321;AN=56;BaseQRankSum=11.230;DP=476;FS=24.489;HRun=0;HaplotypeScore=100.0943;InbreedingCoeff=-0.4879;MQ=38.35;MQ0=13;MQRankSum=-7.195;QD=6.31;ReadPosRankSum=5.483;VQSLOD=0.2080;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:89.11:0,89,1668	0/1:7,0:7:20.08:20,0,216	0/0:14,0:2:6.02:0,6,121	0/0:12,0:5:8.14:0,8,144	0/0:19,0:17:42.97:0,43,601	0/1:13,8:18:99:142,0,335	0/1:14,2:15:52.25:52,0,522	0/1:26,0:25:99:201,0,817	0/0:13,0:12:20.99:0,21,349	0/1:35,0:31:99:224,0,1076	0/1:26,0:25:99:187,0,513	0/1:12,3:14:64.02:64,0,449	0/0:10,1:10:30.09:0,30,553	0/1:17,3:14:19.59:20,0,420	0/1:21,7:25:18.35:18,0,807	0/1:7,0:6:19.92:20,0,173	0/1:7,4:9:31.06:69,0,31	0/1:6,0:5:7.44:7,0,99	0/1:30,0:27:99:109,0,1246	0/0:16,0:14:18.06:0,18,334	0/0:4,0:4:6.02:0,6,98	0/1:12,0:12:99:107,0,103	0/1:15,0:14:9.08:9,0,233	0/0:4,2:6:8.78:0,9,97	0/0:15,2:16:36.12:0,36,703	0/1:23,1:23:99:369,0,129	0/1:23,0:22:99:392,0,254	0/1:5,2:7:35.04:222,0,35
chr10	22244644	.	CA	C	3868.57	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=9.990;DP=689;FS=8.314;HRun=5;HaplotypeScore=69.1966;InbreedingCoeff=0.9995;MQ=76.04;MQ0=0;MQRankSum=0.196;QD=29.99;ReadPosRankSum=-0.146;VQSLOD=3.8612;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:57.19:0,57,774	0/0:14,0:14:42.14:0,42,575	0/0:30,0:30:83.84:0,84,1064	0/0:20,0:19:35.56:0,36,419	0/0:41,0:41:99:0,108,1435	0/0:34,0:34:96.32:0,96,1310	0/0:13,0:13:39.13:0,39,533	1/1:3,23:26:66.19:747,66,0	0/0:20,0:20:60.20:0,60,817	1/1:2,27:29:81.23:915,81,0	1/1:0,30:30:84.24:947,84,0	0/0:32,0:32:93.31:0,93,1268	0/0:30,0:30:87.28:0,87,1173	0/0:22,0:22:60.20:0,60,816	1/1:4,18:22:54.15:613,54,0	1/1:2,20:22:57.16:647,57,0	0/0:21,0:21:54.05:0,54,736	0/0:20,0:20:54.18:0,54,738	0/0:16,0:16:48.16:0,48,657	0/0:36,0:35:93.31:0,93,1272	0/0:19,0:19:48.14:0,48,625	0/0:22,0:22:63.21:0,63,853	0/0:33,0:33:93.29:0,93,1244	0/0:17,0:17:51.16:0,51,680	0/0:32,0:32:87.29:0,87,1188	0/0:29,0:29:81.27:0,81,1105	0/0:28,0:28:84.28:0,84,1145	0/0:8,0:8:24.08:0,24,328
chr10	22246743	.	C	CAG	3135.86	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-9.092;DP=1050;FS=10.838;HRun=0;HaplotypeScore=126.0400;InbreedingCoeff=0.9683;MQ=69.46;MQ0=25;MQRankSum=-2.215;QD=28.51;ReadPosRankSum=-3.381;VQSLOD=3.7683;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:94.40:0,94,1403	0/0:17,0:17:39.11:0,39,475	0/0:99,0:35:26.90:0,27,609	0/0:141,0:55:41.33:0,41,742	0/0:33,0:33:84.25:0,84,1035	0/0:32,0:32:78.25:0,78,975	0/0:32,0:33:84.06:0,84,1026	1/1:11,25:36:60.13:928,60,0	0/0:36,0:36:93.27:0,93,1146	1/1:11,37:48:99:1735,108,0	1/1:6,18:24:7.10:609,7,0	0/0:24,0:24:54.17:0,54,675	0/0:31,0:31:84.25:0,84,1036	0/0:25,0:26:66.04:0,66,801	0/0:34,0:33:87.25:0,87,1061	0/0:32,0:32:84.27:0,84,1050	0/0:22,0:23:35.65:0,36,641	0/0:19,0:19:48.06:0,48,564	0/0:22,0:22:54.16:0,54,663	0/0:31,0:31:78.25:0,78,975	0/0:27,0:27:66.21:0,66,824	0/0:31,0:31:69.22:0,69,862	0/0:35,0:35:83.94:0,84,1023	0/0:40,0:40:99:0,117,1449	0/0:30,0:30:84.27:0,84,1050	0/0:33,0:33:78.25:0,78,976	0/0:39,0:39:99:0,105,1289	0/0:17,0:17:51.11:0,51,616
chr10	22248263	.	AACACAC	A	8789.45	PASS	AB=0.829;AC=34;AF=0.607;AN=56;BaseQRankSum=0.730;DP=562;FS=0.414;HRun=0;HaplotypeScore=143.3465;InbreedingCoeff=0.1926;MQ=68.81;MQ0=7;MQRankSum=-0.809;QD=21.60;ReadPosRankSum=4.702;VQSLOD=4.5453;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:26:7.90:8,0,10	1/1:9,0:9:24.08:503,24,0	0/0:29,0:19:42.14:0,42,1172	0/0:38,0:24:39.75:0,40,1645	0/0:26,0:26:57.40:0,57,581	0/1:20,5:26:6.70:876,0,7	0/1:11,4:15:21.75:287,0,22	1/1:8,0:30:2.14:399,2,0	1/1:17,3:21:20.77:754,21,0	1/1:21,0:21:4.40:387,4,0	1/1:11,0:11:23.94:202,24,0	0/1:12,1:13:27.10:301,0,27	0/1:20,2:24:99:485,0,111	0/1:19,3:23:21.99:601,0,22	0/1:23,5:29:22.52:925,0,23	0/1:8,2:10:41.40:234,0,41	0/1:2,14:16:4.83:50,0,5	1/1:1,1:3:6.02:105,6,0	1/1:4,14:17:16.86:825,17,0	1/1:3,12:15:2.97:20,3,0	1/1:3,17:20:1.55:4,2,0	1/1:20,5:25:42.14:883,42,0	1/1:16,1:17:23.11:413,23,0	0/1:19,3:21:12.36:198,0,12	1/1:6,3:11:6.66:329,7,0	0/0:20,0:20:54.12:0,54,1509	0/0:28,0:27:61.51:0,62,1782	0/0:14,0:13:36.12:0,36,834
chr10	22248270	.	ACACACTCTCTCTCT	A	6164.97	PASS	AB=0.992;AC=22;AF=0.393;AN=56;BaseQRankSum=-1.323;DP=587;FS=7.146;HRun=0;HaplotypeScore=232.8987;InbreedingCoeff=-0.2060;MQ=62.60;MQ0=8;MQRankSum=0.739;QD=15.97;ReadPosRankSum=1.356;VQSLOD=2.7302;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:27:5.02:19,0,5	0/1:8,0:8:68.95:248,0,69	0/0:24,0:14:36.07:0,36,721	0/0:37,0:23:37.07:0,37,1136	0/0:30,0:30:22.62:0,23,762	0/1:29,0:28:99:432,0,819	0/1:16,0:16:99:164,0,505	1/1:23,0:23:66.01:991,66,0	0/1:22,0:22:99:290,0,431	1/1:3,19:23:60.18:1309,60,0	1/1:11,0:12:24.08:450,24,0	0/1:15,0:15:75.41:75,0,1007	0/1:30,0:30:99:166,0,2168	0/1:20,0:20:99:220,0,771	0/1:34,0:34:99:436,0,1323	0/1:14,0:14:99:130,0,848	0/1:17,0:17:30.52:31,0,128	0/0:5,0:5:12.04:0,12,379	0/1:23,0:22:99:420,0,288	0/0:17,0:17:2.50:0,3,144	0/0:21,0:21:9.03:0,9,406	0/1:23,0:22:99:368,0,304	0/1:12,0:14:99:139,0,602	0/1:22,0:20:99:109,0,137	0/1:14,0:14:99:170,0,553	0/0:23,0:23:66.23:0,66,2564	0/0:30,0:28:76.11:0,76,2624	0/0:14,0:13:36.12:0,36,1100
chr10	22248272	.	ACACTCTCTCT	A	3005.39	PASS	AB=1.000;AC=24;AF=0.429;AN=56;BaseQRankSum=1.521;DP=592;FS=21.791;HRun=0;HaplotypeScore=205.5298;InbreedingCoeff=-0.2124;MQ=60.47;MQ0=8;MQRankSum=1.784;QD=7.17;ReadPosRankSum=2.114;VQSLOD=1.3192;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:2,24:27:8.96:199,9,0	0/1:9,0:9:27.45:110,0,27	0/0:23,0:13:3.59:0,4,305	0/0:35,0:21:41.14:0,41,533	0/1:29,0:29:99:289,0,410	0/1:31,0:30:99:203,0,653	0/1:16,0:16:65.48:65,0,384	1/1:23,0:23:56.81:444,57,0	0/1:20,0:20:99:143,0,264	1/1:21,0:21:56.20:659,56,0	1/1:12,0:12:23.96:236,24,0	0/1:14,0:14:6.13:6,0,779	0/1:31,0:31:73.57:74,0,1788	0/1:22,0:22:69.43:69,0,768	0/1:34,0:34:99:164,0,1008	0/1:14,0:14:43.36:43,0,678	0/1:19,0:19:12.24:12,0,100	0/0:5,0:5:9.92:0,10,266	0/1:23,0:22:99:150,0,211	0/0:20,0:20:3.01:0,3,117	0/0:22,0:22:9.03:0,9,321	0/1:24,0:23:99:158,0,306	0/1:14,0:14:61.64:62,0,436	0/1:23,0:21:40.85:41,0,213	0/1:13,0:13:51.42:51,0,443	0/0:23,0:23:66.11:0,66,1670	0/0:31,0:29:68.07:0,68,1686	0/0:14,0:13:35.74:0,36,632
chr10	22248274	.	ACT	A	129.47	PASS	AB=0.909;AC=9;AF=0.180;AN=50;BaseQRankSum=1.328;DP=643;FS=26.396;HRun=0;HaplotypeScore=162.9520;InbreedingCoeff=0.4945;MQ=55.10;MQ0=8;MQRankSum=-2.983;QD=1.22;ReadPosRankSum=1.785;VQSLOD=1.1336;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:27:4.94:23,5,0	0/0:13,0:13:0:0,0,0	./.	./.	0/0:30,0:30:15:0,15,153	0/0:36,0:35:18.49:0,18,199	0/0:17,0:17:5.55:0,6,52	./.	0/0:24,0:24:3.85:0,4,23	1/1:21,0:21:14.20:70,14,0	1/1:12,0:12:2.84:14,3,0	0/0:17,0:17:19.27:0,19,199	0/0:32,0:32:22.04:0,22,394	0/0:24,0:24:17.98:0,18,177	0/0:37,0:37:29.45:0,29,255	0/0:16,0:16:18.02:0,18,196	0/0:22,0:22:5.97:0,6,46	0/0:6,0:6:10.77:0,11,72	0/0:26,0:25:9.02:0,9,95	0/0:24,0:24:2.71:0,3,25	0/0:25,0:25:5.97:0,6,46	0/0:28,0:27:7.24:0,7,51	0/0:17,0:17:8.40:0,8,53	0/0:30,0:27:8.89:0,9,71	0/0:13,0:13:14.96:0,15,122	0/0:23,0:23:2.89:0,3,143	0/1:27,2:28:88.31:88,0,204	1/1:12,4:15:6.01:65,6,0
chr10	22249492	.	CAGAGAG	C	2805.79	PASS	AB=0.984;AC=36;AF=0.643;AN=56;BaseQRankSum=-1.053;DP=674;FS=36.083;HRun=0;HaplotypeScore=169.3084;InbreedingCoeff=0.3920;MQ=59.93;MQ0=23;MQRankSum=1.796;QD=6.06;ReadPosRankSum=-2.995;VQSLOD=0.6257;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:32:73.70:0,74,958	1/1:8,1:9:2.77:52,3,0	0/0:31,0:12:32.93:0,33,441	0/0:73,0:19:15.79:0,16,311	0/0:21,0:20:57.18:0,57,965	1/1:17,0:15:10.23:55,10,0	1/1:25,0:24:10.90:98,11,0	0/1:45,0:42:22.69:138,0,23	1/1:28,1:29:19.98:287,20,0	1/1:20,2:22:11.35:286,11,0	0/1:23,0:23:53.99:54,0,54	0/1:25,3:28:4.26:496,0,4	0/1:15,0:14:25.54:39,0,26	1/1:19,0:19:1.84:123,2,0	1/1:18,2:20:17.54:250,18,0	1/1:20,2:22:17.70:223,18,0	1/1:22,2:23:9.07:184,9,0	1/1:9,0:9:4.72:64,5,0	1/1:23,1:18:7.42:107,7,0	1/1:19,0:19:18.83:142,19,0	1/1:14,0:13:3:25,3,0	0/0:9,16:25:5.91:0,6,42	1/1:21,1:22:19.55:175,20,0	0/1:35,0:35:44.17:44,0,60	1/1:18,0:18:10.69:89,11,0	0/0:19,0:19:12.87:0,13,175	0/1:24,0:24:63.10:63,0,115	0/0:6,0:5:11.52:0,12,237
chr10	22249500	.	CAGAG	C	974.69	PASS	AB=0.967;AC=27;AF=0.519;AN=52;BaseQRankSum=1.830;DP=664;FS=20.372;HRun=0;HaplotypeScore=147.4459;InbreedingCoeff=-0.0884;MQ=54.68;MQ0=23;MQRankSum=-1.058;QD=2.23;ReadPosRankSum=4.124;VQSLOD=0.9202;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:34,1:33:11.57:148,12,0	0/1:9,1:10:19.41:19,0,27	./.	./.	0/0:22,0:21:3.01:0,3,68	1/1:14,2:14:6.02:92,6,0	1/1:23,1:22:3.20:10,3,0	0/0:41,0:38:0.47:0,0,1	0/1:31,0:32:68.25:68,0,71	0/1:24,0:24:46.96:64,0,47	0/1:20,0:23:11.25:11,0,33	1/1:22,1:27:11.93:264,12,0	1/1:11,4:14:3.01:46,3,0	1/1:16,1:17:6.01:79,6,0	0/1:25,0:25:41.70:47,0,42	0/1:24,0:24:25.68:26,0,51	0/1:28,0:27:1.23:33,0,1	0/0:7,0:7:2.98:0,3,21	1/1:23,0:17:2.60:10,3,0	0/1:15,0:16:24.87:25,0,41	0/0:14,0:13:3.01:0,3,37	0/1:25,1:26:6.71:40,0,7	0/1:19,0:19:59.11:63,0,59	0/1:35,1:36:40.08:40,0,62	1/1:17,0:17:3.01:35,3,0	0/0:20,0:20:13.22:0,13,145	0/0:25,0:25:2.38:0,2,52	0/0:8,0:7:6.42:0,6,43
chr10	22249543	.	A	AGAGAGG	494.14	PASS	AB=0.557;AC=5;AF=0.089;AN=56;BaseQRankSum=2.054;DP=600;FS=6.472;HRun=0;HaplotypeScore=147.8333;InbreedingCoeff=0.7521;MQ=55.15;MQ0=17;MQRankSum=-3.195;QD=8.38;ReadPosRankSum=-0.058;VQSLOD=2.2381;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:36:46.96:0,47,469	0/0:9,0:9:27.01:0,27,277	0/0:19,0:9:12.08:0,12,149	0/0:26,0:11:32.94:0,33,331	0/0:24,0:24:38.08:0,38,323	0/0:12,0:11:29.68:0,30,286	0/0:26,0:25:34.47:0,34,317	0/0:35,0:33:81.46:0,81,689	0/0:23,0:23:47.60:0,48,525	0/0:22,0:22:59.38:0,59,605	0/0:17,0:17:35.41:0,35,290	0/0:32,0:32:68.24:0,68,712	0/0:23,0:22:35.77:0,36,304	0/0:14,0:14:27.87:0,28,253	0/0:21,0:21:53.78:0,54,558	0/0:24,0:23:54.01:0,54,537	0/0:20,0:18:23.53:0,24,224	0/0:7,0:7:17.90:0,18,156	0/0:15,0:15:39.02:0,39,393	0/0:23,0:23:54.59:0,55,509	0/0:20,0:20:38.90:0,39,356	0/0:13,0:13:20.15:0,20,147	0/0:22,0:21:41.98:0,42,397	0/0:36,0:36:36.47:0,36,403	0/0:20,0:20:28.58:0,29,245	1/1:16,0:18:36.71:394,37,0	0/1:7,25:34:7.26:169,0,7	1/1:7,0:6:5.99:52,6,0
chr10	22250125	.	CTG	C	4366.39	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=13.301;DP=735;FS=1.773;HRun=0;HaplotypeScore=85.2585;InbreedingCoeff=0.9969;MQ=89.10;MQ0=0;MQRankSum=-2.196;QD=44.10;ReadPosRankSum=-2.054;VQSLOD=5.8118;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,129,2316	0/0:6,0:6:18.04:0,18,314	0/0:30,0:30:87.24:0,87,1520	0/0:25,0:25:69.17:0,69,1256	0/0:35,0:35:99:0,105,2026	0/0:16,0:16:48.16:0,48,926	0/0:32,0:32:93.27:0,93,1684	1/1:0,42:42:99:1843,126,0	0/0:18,0:18:51.16:0,51,932	1/1:1,30:31:90.31:1378,90,0	1/1:0,26:26:75.25:1146,75,0	0/0:31,0:31:90.29:0,90,1700	0/0:25,0:25:75.23:0,75,1378	0/0:22,0:22:66.23:0,66,1274	0/0:22,0:22:66.21:0,66,1232	0/0:28,0:28:84.27:0,84,1588	0/0:13,0:13:36.11:0,36,661	0/0:10,0:10:30.10:0,30,566	0/0:23,0:23:69.24:0,69,1322	0/0:24,0:24:72.23:0,72,1346	0/0:31,0:31:93.31:0,93,1761	0/0:33,0:33:99:0,99,1878	0/0:22,0:22:63.22:0,63,1207	0/0:27,0:27:81.28:0,81,1554	0/0:30,0:30:90.31:0,90,1738	0/0:42,2:44:59.52:0,60,2197	0/0:28,0:28:84.29:0,84,1609	0/0:17,0:17:51.17:0,51,969
chr10	22251942	.	TG	T	17601.94	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=13.826;DP=656;FS=3.685;HRun=1;HaplotypeScore=91.5489;InbreedingCoeff=0.9998;MQ=85.48;MQ0=0;MQRankSum=-4.377;QD=37.45;ReadPosRankSum=3.630;VQSLOD=5.3989;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,160,2513	1/1:0,10:10:30.10:419,30,0	0/0:18,0:18:54.12:0,54,748	0/0:23,0:23:62.20:0,62,965	0/0:24,0:24:72.25:0,72,1144	1/1:0,22:22:63.21:881,63,0	1/1:0,24:24:66.22:922,66,0	1/1:0,38:38:99:1524,114,0	1/1:0,17:17:48.16:671,48,0	1/1:0,22:22:66.18:899,66,0	1/1:0,24:24:66.14:897,66,0	1/1:0,25:25:69.23:964,69,0	1/1:0,24:24:72.24:1006,72,0	1/1:0,24:24:57.19:797,57,0	1/1:0,24:24:66.22:922,66,0	1/1:0,14:14:33.11:461,33,0	1/1:0,31:31:69.23:964,69,0	1/1:0,17:17:51.17:711,51,0	1/1:0,27:27:69.21:932,69,0	1/1:0,15:15:42.07:563,42,0	1/1:0,27:27:75.25:1048,75,0	1/1:0,18:18:48.16:671,48,0	1/1:0,23:23:66.22:922,66,0	1/1:0,14:14:30.10:419,30,0	1/1:0,30:30:72.24:1006,72,0	0/0:20,0:20:60.17:0,60,873	0/0:33,0:33:99:0,99,1523	0/0:15,0:15:45.14:0,45,694
chr10	22252072	.	TG	T	727.97	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=0.245;DP=543;FS=1.403;HRun=2;HaplotypeScore=108.9130;InbreedingCoeff=0.4661;MQ=68.05;MQ0=0;MQRankSum=-1.558;QD=17.76;ReadPosRankSum=2.971;VQSLOD=3.9490;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:78.49:0,78,1072	0/0:10,0:10:7.70:0,8,52	0/0:12,0:9:7.27:0,7,70	0/0:8,0:5:14.96:0,15,125	0/0:24,0:24:63.35:0,63,789	0/0:18,0:18:5.38:0,5,41	0/0:23,0:23:10.89:0,11,62	0/0:43,0:43:32.19:0,32,310	0/0:21,0:21:9.17:0,9,85	0/0:19,0:19:21.52:0,22,134	0/0:32,0:32:14.88:0,15,59	0/0:23,0:23:12.06:0,12,102	0/0:22,0:22:7.18:0,7,38	0/1:16,0:16:9.95:10,0,15	1/1:1,14:15:36.12:464,36,0	1/1:0,10:10:30.09:378,30,0	0/0:22,0:22:1.82:0,2,41	0/0:11,0:11:2.56:0,3,43	0/0:27,0:27:8.18:0,8,205	0/0:26,0:26:6.30:0,6,48	0/0:9,0:9:1.07:0,1,2	0/0:11,0:11:8.16:0,8,70	0/0:25,0:25:7.24:0,7,31	0/0:8,0:8:5.60:0,6,34	0/0:24,0:24:23.77:0,24,143	0/0:13,0:13:37.30:0,37,379	0/0:28,0:28:75.10:0,75,745	0/0:14,0:14:42.01:0,42,392
chr10	22252074	.	GT	G	7378.73	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=4.339;DP=536;FS=0.000;HRun=11;HaplotypeScore=85.4431;InbreedingCoeff=0.9148;MQ=67.37;MQ0=0;MQRankSum=-0.351;QD=18.17;ReadPosRankSum=2.012;VQSLOD=5.6005;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,2:30:28.87:0,29,699	1/1:2,8:10:17.97:148,18,0	0/0:10,0:8:8.34:0,8,40	0/0:8,0:5:3.89:0,4,31	0/0:22,2:25:10.51:0,11,471	1/1:1,14:16:37.99:301,38,0	1/1:2,20:22:44.93:369,45,0	1/1:9,32:42:68.87:758,69,0	1/1:3,18:21:50.93:419,51,0	1/1:2,15:17:41.91:342,42,0	1/1:1,30:32:80.88:665,81,0	1/1:2,19:21:38.95:320,39,0	1/1:1,21:22:56.92:468,57,0	1/1:1,15:16:35.83:295,36,0	1/1:14,0:14:33.38:150,33,0	1/1:10,0:10:27.99:136,28,0	1/1:3,21:24:53.93:443,54,0	1/1:2,7:10:20.20:155,20,0	1/1:7,20:27:30.91:457,31,0	1/1:1,26:27:71.90:591,72,0	1/1:0,9:9:17.98:148,18,0	1/1:3,6:9:14.97:123,15,0	1/1:0,24:25:64.97:523,65,0	1/1:1,7:8:17.98:148,18,0	1/1:5,19:24:50.92:419,51,0	0/0:5,1:13:4.26:0,4,139	0/0:9,0:29:54.45:0,54,308	0/0:3,0:14:31.25:0,31,157
chr10	22252716	.	GCACACA	G	2625.65	PASS	AB=0.833;AC=20;AF=0.357;AN=56;BaseQRankSum=-1.119;DP=440;FS=0.000;HRun=0;HaplotypeScore=138.3331;InbreedingCoeff=0.4100;MQ=56.22;MQ0=7;MQRankSum=1.360;QD=15.18;ReadPosRankSum=1.971;VQSLOD=3.0562;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:60.18:0,60,1562	0/0:4,0:4:5.99:0,6,51	0/0:37,0:13:29.56:0,30,478	0/0:24,0:11:20.17:0,20,295	0/0:20,0:21:1.67:0,2,23	0/1:10,1:12:10.16:182,0,10	1/1:3,4:7:3.01:53,3,0	0/1:7,0:22:24.69:240,0,25	0/0:13,0:12:22.97:0,23,263	0/0:13,0:13:11.17:0,11,280	0/1:17,0:18:7.19:53,0,7	1/1:7,3:10:9.03:161,9,0	0/1:7,0:8:14.27:157,0,14	0/1:9,4:14:28.54:242,0,29	0/0:10,0:10:11.07:0,11,265	0/0:15,0:15:23.67:0,24,618	0/0:10,0:10:18.21:0,18,195	0/0:9,0:9:15.44:0,15,172	0/0:17,0:16:23.47:0,23,216	0/0:19,0:19:41.25:0,41,361	0/0:10,0:10:6.01:0,6,75	1/1:10,2:13:17.94:322,18,0	1/1:14,3:17:20.37:298,20,0	1/1:8,1:10:3.01:65,3,0	1/1:12,1:16:24.05:373,24,0	0/1:16,2:19:65.60:479,0,66	0/0:17,0:17:22.14:0,22,181	1/1:6,0:6:9.03:184,9,0
chr10	22252727	.	C	CAGAG	921.20	PASS	AB=0.951;AC=19;AF=0.339;AN=56;BaseQRankSum=4.853;DP=451;FS=5.345;HRun=0;HaplotypeScore=147.9254;InbreedingCoeff=0.0687;MQ=53.06;MQ0=9;MQRankSum=-1.566;QD=4.70;ReadPosRankSum=-3.262;VQSLOD=1.7078;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:65.73:0,66,1092	0/0:3,0:3:6.02:0,6,81	0/0:33,0:12:29.74:0,30,357	0/0:20,0:9:6.45:0,6,228	0/1:23,0:23:18.25:18,0,19	0/1:11,0:11:8.62:43,0,9	1/1:7,0:7:5.52:40,6,0	0/0:29,0:27:12.59:0,13,699	0/1:13,0:12:19:19,0,315	0/0:14,0:14:28.24:0,28,363	0/0:16,0:16:13.79:0,14,154	1/1:8,0:8:3.90:52,4,0	1/1:8,0:7:5.85:37,6,0	0/1:14,0:13:24.47:24,0,45	0/0:12,0:11:10.27:0,10,224	0/0:18,0:17:25.63:0,26,474	0/0:11,0:11:13.75:0,14,329	0/1:8,0:8:10.73:11,0,199	0/0:15,0:14:34:0,34,519	0/0:23,0:23:41.44:0,41,576	0/0:8,0:8:6.02:0,6,98	0/1:13,0:12:8.20:32,0,8	0/1:15,0:15:0.81:85,0,1	1/1:10,0:10:0.45:48,0,0	0/1:16,0:15:8.56:38,0,9	0/1:20,1:20:31.46:316,0,31	0/1:3,12:19:47.22:277,0,47	0/1:9,0:8:6.11:45,0,6
chr10	22252733	.	C	CACACACACACAGAG	3083	PASS	AB=1.000;AC=24;AF=0.429;AN=56;BaseQRankSum=-0.749;DP=573;FS=31.590;HRun=0;HaplotypeScore=266.3430;InbreedingCoeff=-0.6440;MQ=47.14;MQ0=10;MQRankSum=-5.375;QD=6.98;ReadPosRankSum=-8.231;VQSLOD=-0.4440;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:53:31.27:0,31,1162	0/1:6,0:6:74.23:74,0,161	0/0:24,0:7:11.67:0,12,159	0/1:18,0:5:3.73:4,0,110	1/1:6,10:25:0.47:2,0,0	0/1:20,0:18:99:211,0,203	0/1:11,0:11:48.86:49,0,74	0/1:46,0:39:99:211,0,639	0/1:12,0:11:73.16:73,0,517	0/1:18,0:18:99:258,0,530	0/1:18,0:18:51.11:51,0,280	0/1:11,0:10:21.84:22,0,134	0/1:18,0:17:99:179,0,286	0/0:18,0:17:17.75:0,18,337	0/0:20,0:19:11.52:0,12,291	0/1:29,0:28:99:336,0,505	0/1:16,0:16:99:289,0,361	0/1:7,0:7:72.48:72,0,238	0/1:26,0:25:99:310,0,303	0/1:30,0:30:81.08:81,0,642	0/0:16,0:15:8.83:0,9,161	0/1:24,0:23:51.41:51,0,265	0/1:22,0:21:52.15:52,0,254	0/1:10,0:10:58.06:132,0,58	0/1:18,0:17:99:116,0,380	0/1:24,0:21:99:342,0,696	0/1:22,0:22:99:154,0,152	0/1:11,0:10:99:166,0,196
chr10	22252761	.	G	GGAGAGAGAGAT	4473.11	PASS	AB=0.966;AC=23;AF=0.411;AN=56;BaseQRankSum=7.961;DP=648;FS=7.044;HRun=0;HaplotypeScore=266.1694;InbreedingCoeff=-0.5122;MQ=59.02;MQ0=5;MQRankSum=-3.101;QD=9.02;ReadPosRankSum=3.016;VQSLOD=2.7622;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:57:75.52:0,76,1242	0/1:8,0:8:53.60:169,0,54	0/0:17,0:14:35.96:0,36,485	0/0:19,0:12:30.03:0,30,500	0/0:19,0:19:16.58:0,17,125	0/1:25,0:23:99:114,0,111	0/1:16,0:16:65.66:66,0,73	0/1:53,0:47:72.37:72,0,1077	0/1:6,1:20:66.14:123,0,66	0/1:34,0:34:99:547,0,1236	0/0:17,0:17:21.52:0,22,227	0/1:15,0:14:26.46:158,0,26	0/1:18,0:17:60.15:104,0,60	0/1:21,0:20:91.49:132,0,91	0/1:24,0:24:3.55:187,0,4	1/1:28,0:27:22.37:657,22,0	0/1:20,0:19:35.87:647,0,36	0/1:9,0:9:73.26:127,0,73	0/1:20,0:31:99:266,0,379	0/1:33,0:33:99:255,0,122	0/0:23,0:22:31.70:0,32,177	0/1:23,0:22:45.54:46,0,46	0/1:26,0:25:51.59:90,0,52	0/1:13,0:13:8.82:183,0,9	0/1:17,0:17:54.45:100,0,54	0/1:23,0:20:99:255,0,358	0/1:24,0:24:77.44:77,0,362	0/1:13,0:13:97.77:98,0,291
chr10	22253151	.	C	CTT	16559.59	PASS	AB=0.875;AC=43;AF=0.768;AN=56;BaseQRankSum=-13.785;DP=613;FS=4.473;HRun=7;HaplotypeScore=63.0881;InbreedingCoeff=0.8867;MQ=78.76;MQ0=0;MQRankSum=-2.113;QD=35.84;ReadPosRankSum=1.589;VQSLOD=4.7544;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:90.26:0,90,1047	1/1:0,4:4:9.03:148,9,0	0/0:19,0:19:17.52:0,18,317	0/0:19,0:19:27:0,27,285	0/0:40,0:40:99:0,108,1226	1/1:1,33:34:77.75:1240,78,0	1/1:2,14:16:39.13:640,39,0	1/1:4,21:27:69.21:1082,69,0	1/1:2,14:16:27.09:443,27,0	1/1:7,15:22:45.15:739,45,0	1/1:6,19:25:60.12:908,60,0	1/1:4,15:19:39.13:640,39,0	1/1:1,24:25:54.18:886,54,0	1/1:2,17:20:48.16:788,48,0	1/1:0,22:22:48.16:788,48,0	1/1:1,18:19:45.15:738,45,0	1/1:3,32:35:69.24:1133,69,0	1/1:0,11:11:27.09:443,27,0	1/1:5,14:19:45.15:726,45,0	1/1:1,23:26:74.74:1164,75,0	1/1:3,22:25:54.18:886,54,0	1/1:4,13:17:39.09:601,39,0	1/1:1,21:22:51.17:837,51,0	1/1:0,15:15:39.13:640,39,0	1/1:3,25:28:63.22:1034,63,0	0/1:12,2:14:56.37:56,0,377	0/0:27,0:27:72.19:0,72,828	0/0:13,0:13:27:0,27,276
chr10	22253426	.	CA	C	6763.04	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=14.068;DP=615;FS=1.827;HRun=4;HaplotypeScore=60.3500;InbreedingCoeff=0.9983;MQ=87.59;MQ0=0;MQRankSum=-0.726;QD=32.99;ReadPosRankSum=3.642;VQSLOD=5.4736;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:81.27:0,81,1132	0/0:10,0:10:30.10:0,30,420	0/0:26,0:26:75.24:0,75,1036	0/0:17,0:17:45.11:0,45,601	0/0:31,0:31:87.27:0,87,1189	1/1:1,20:20:60.18:719,60,0	1/1:0,26:26:75.23:900,75,0	0/0:35,0:35:99:0,99,1329	0/0:23,0:23:69.23:0,69,966	0/0:13,0:13:39.12:0,39,519	0/0:19,0:19:54.14:0,54,707	1/1:1,23:24:69.21:827,69,0	1/1:1,25:26:72.22:863,72,0	1/1:0,25:25:66.20:791,66,0	0/0:26,0:25:78.25:0,78,1075	0/0:22,0:22:66.21:0,66,907	0/0:28,0:28:84.26:0,84,1144	0/0:8,0:8:24.08:0,24,336	0/0:21,0:21:60.17:0,60,792	0/0:33,0:33:99:0,99,1368	0/0:15,0:15:45.14:0,45,611	1/1:0,15:15:42.13:504,42,0	1/1:0,17:17:51.16:612,51,0	1/1:1,21:22:48.15:576,48,0	1/1:1,28:29:81.25:972,81,0	0/0:26,0:26:69.23:0,69,966	0/0:24,0:24:66.19:0,66,889	0/0:6,0:6:18.06:0,18,252
chr10	22253565	.	A	AT	2256.98	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-10.336;DP=664;FS=1.062;HRun=3;HaplotypeScore=59.8141;InbreedingCoeff=0.9982;MQ=85.49;MQ0=0;MQRankSum=-1.684;QD=37.62;ReadPosRankSum=0.665;VQSLOD=4.0410;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:90.28:0,90,1079	0/0:9,0:9:27.08:0,27,324	0/0:18,0:18:45.91:0,46,472	0/0:25,0:25:60.12:0,60,671	0/0:33,0:33:96.25:0,96,1151	0/0:30,0:30:90.24:0,90,1055	0/0:21,0:21:60.18:0,60,719	0/0:32,0:32:81.25:0,81,972	0/0:22,0:22:66.18:0,66,779	0/0:33,0:33:90.26:0,90,1062	0/0:29,0:29:84.25:0,84,999	0/0:29,0:29:87.25:0,87,1032	0/0:23,0:23:63.17:0,63,743	0/0:27,0:27:81.22:0,81,948	0/0:23,0:22:69.19:0,69,805	0/0:31,0:31:90.26:0,90,1061	0/0:22,0:22:63.18:0,63,744	0/0:10,0:10:24.07:0,24,287	0/0:28,0:28:78.22:0,78,922	0/0:29,0:29:87.27:0,87,1044	0/0:21,0:21:60.18:0,60,720	0/0:17,0:17:48.15:0,48,575	0/0:19,0:19:54.17:0,54,648	0/0:25,0:25:75.17:0,75,863	0/0:14,0:14:42.13:0,42,504	1/1:0,25:25:75.23:1014,75,0	1/1:2,25:27:75.25:1050,75,0	1/1:0,8:8:24.08:336,24,0
chr10	22254063	.	C	CT	5937.58	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-14.140;DP=625;FS=5.053;HRun=9;HaplotypeScore=68.0033;InbreedingCoeff=0.9457;MQ=76.19;MQ0=0;MQRankSum=-0.369;QD=22.75;ReadPosRankSum=-0.285;VQSLOD=5.6149;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,1:30:32.81:0,33,514	1/1:3,9:12:4.03:273,4,0	0/0:14,0:14:26.87:0,27,216	0/0:16,0:15:3.27:0,3,113	0/0:24,0:24:62.97:0,63,547	0/0:27,1:28:47.80:0,48,644	0/0:23,0:23:59.92:0,60,521	1/1:5,26:30:63.59:665,64,0	1/1:4,16:20:12.67:371,13,0	1/1:8,17:25:51.14:564,51,0	1/1:5,17:23:15.81:360,16,0	0/0:15,0:15:41.99:0,42,365	0/0:27,0:27:77.97:0,78,672	0/0:23,0:23:68.99:0,69,599	1/1:3,23:26:34.62:605,35,0	1/1:1,22:23:57.15:631,57,0	1/1:4,16:20:39.11:431,39,0	1/1:1,15:17:28.15:458,28,0	1/1:4,10:14:30.08:331,30,0	1/1:5,28:33:81.13:862,81,0	1/1:3,14:17:16.01:387,16,0	0/0:26,0:26:68.08:0,68,592	0/0:24,0:25:58.98:0,59,498	0/0:22,1:23:17.76:0,18,378	0/0:28,0:28:74.96:0,75,651	0/0:23,1:24:26.80:0,27,461	0/0:27,0:28:74.02:0,74,630	0/0:9,0:9:17.97:0,18,156
chr10	22257655	.	TG	T	7007.65	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=0.740;DP=601;FS=3.967;HRun=1;HaplotypeScore=72.2979;InbreedingCoeff=0.9993;MQ=91.79;MQ0=0;MQRankSum=-1.062;QD=36.50;ReadPosRankSum=3.753;VQSLOD=5.3393;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,105,1621	0/0:8,0:8:24.08:0,24,383	0/0:26,0:26:75.20:0,75,1130	0/0:24,0:24:64.98:0,65,888	0/0:28,0:28:84.23:0,84,1248	1/1:0,28:28:78.26:1091,78,0	1/1:0,13:13:39.13:545,39,0	0/0:29,0:29:87.30:0,87,1391	0/0:18,0:18:54.15:0,54,816	0/0:12,0:12:36.12:0,36,576	0/0:12,0:12:33.11:0,33,527	1/1:0,20:20:51.17:713,51,0	1/1:0,28:28:72.24:1006,72,0	1/1:0,31:31:81.27:1132,81,0	0/0:21,0:21:63.19:0,63,961	0/0:21,0:21:63.20:0,63,984	0/0:36,0:36:99:0,108,1686	0/0:14,0:14:42.14:0,42,670	0/0:11,0:11:33.11:0,33,522	0/0:24,0:24:72.24:0,72,1133	0/0:26,0:26:78.20:0,78,1172	1/1:0,24:24:63.14:842,63,0	1/1:0,14:14:36.08:503,36,0	1/1:0,22:22:54.18:755,54,0	1/1:0,12:12:30.10:420,30,0	0/0:28,0:28:84.28:0,84,1321	0/0:26,0:26:78.24:0,78,1213	0/0:9,0:9:27.09:0,27,425
chr10	22257933	.	T	TACAC	2866.73	PASS	AB=0.788;AC=37;AF=0.712;AN=52;BaseQRankSum=-1.706;DP=534;FS=2.469;HRun=0;HaplotypeScore=119.1535;InbreedingCoeff=0.1968;MQ=68.95;MQ0=4;MQRankSum=1.965;QD=7.18;ReadPosRankSum=2.373;VQSLOD=2.7514;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:35,0:50:31.80:33,0,32	1/1:9,0:9:9.03:164,9,0	./.	./.	0/0:14,0:22:8.43:0,8,51	1/1:19,3:25:5.99:140,6,0	1/1:5,3:10:3.01:70,3,0	0/0:23,0:23:5.98:0,6,59	1/1:19,0:19:5.99:104,6,0	0/0:18,0:18:3:0,3,46	0/0:11,0:11:6:0,6,71	1/1:8,3:20:8.98:164,9,0	0/1:8,2:14:28.61:64,0,29	1/1:16,0:16:5.74:36,6,0	0/1:16,0:16:12.84:37,0,13	1/1:17,0:16:3.01:56,3,0	1/1:25,0:24:2.81:54,3,0	1/1:16,0:15:10.73:277,11,0	1/1:16,0:15:6.02:107,6,0	0/0:9,0:9:0:0,0,0	1/1:14,0:12:2.70:45,3,0	1/1:8,3:12:2.98:70,3,0	1/1:14,8:24:9.03:211,9,0	1/1:11,9:24:21.28:435,21,0	0/1:13,4:20:2.57:132,0,3	1/1:12,1:23:32.50:404,33,0	0/1:12,4:19:34.16:198,0,34	1/1:2,6:8:9.03:211,9,0
chr10	22257969	.	C	CAT	1158.11	PASS	AB=0.835;AC=15;AF=0.268;AN=56;BaseQRankSum=4.782;DP=575;FS=7.352;HRun=0;HaplotypeScore=92.2622;InbreedingCoeff=0.3575;MQ=56.24;MQ0=11;MQRankSum=1.400;QD=5.17;ReadPosRankSum=5.520;VQSLOD=1.4890;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:1.28:0,1,489	0/1:10,0:10:6.10:92,0,6	0/0:33,0:13:25.92:0,26,363	0/0:35,0:19:42:0,42,361	0/0:16,0:16:20.76:0,21,145	0/0:25,0:24:18.79:0,19,164	0/0:14,0:14:16.71:0,17,148	0/0:15,0:15:44.49:0,44,382	1/1:18,1:19:24.91:231,25,0	0/0:20,0:20:59.96:0,60,542	0/0:14,0:14:38.95:0,39,357	0/0:25,0:25:21.76:0,22,214	0/0:17,0:17:24.24:0,24,198	0/0:16,0:16:13.14:0,13,221	1/1:21,0:21:6.42:183,6,0	0/1:9,8:17:28.34:28,0,42	0/1:14,11:24:21.02:21,0,61	0/1:19,0:19:67.27:206,0,67	1/1:15,1:14:15.88:297,16,0	0/1:2,12:15:0:0,0,0	1/1:23,0:22:31.87:246,32,0	0/0:12,0:12:14.11:0,14,121	0/0:15,0:15:3.14:0,3,42	0/1:28,0:28:1.51:2,0,227	0/0:17,0:17:14.19:0,14,150	0/1:27,0:27:16.80:17,0,303	0/0:21,0:21:28.39:0,28,261	0/0:9,0:9:0.09:0,0,36
chr10	22258178	.	TA	T	4888.15	PASS	AB=1.000;AC=25;AF=0.446;AN=56;BaseQRankSum=7.576;DP=485;FS=7.966;HRun=6;HaplotypeScore=92.8047;InbreedingCoeff=0.9157;MQ=74.00;MQ0=5;MQRankSum=-1.547;QD=22.42;ReadPosRankSum=2.244;VQSLOD=3.7351;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:60.18:0,60,768	0/0:9,0:9:16.54:0,17,164	0/0:27,0:14:14.85:0,15,187	0/1:23,0:19:21.01:21,0,121	0/0:21,0:21:51.09:0,51,604	1/1:10,15:25:69.11:704,69,0	1/1:2,8:10:24.05:248,24,0	1/1:8,11:19:42.04:437,42,0	0/0:12,0:12:32.90:0,33,310	1/1:8,12:20:45.07:465,45,0	1/1:2,11:13:32.35:330,32,0	1/1:2,3:5:11.90:110,12,0	1/1:4,9:13:36.03:360,36,0	1/1:0,17:17:45.06:465,45,0	0/0:19,0:19:41.78:0,42,416	0/0:10,0:10:23.99:0,24,236	0/0:22,0:22:50.70:0,51,483	0/0:27,0:27:64.26:0,64,569	0/0:18,0:18:47.66:0,48,521	0/0:14,0:14:26.42:0,26,268	0/0:12,0:12:24.42:0,24,240	1/1:10,9:19:48.05:497,48,0	1/1:9,13:22:53.98:527,54,0	1/1:0,10:10:21.05:221,21,0	1/1:9,13:22:50.46:503,50,0	0/0:22,1:23:22.09:0,22,450	0/0:23,0:23:53.77:0,54,517	0/0:6,0:6:14.84:0,15,118
chr10	22258185	.	TG	T	6061.84	PASS	AB=0.902;AC=49;AF=0.875;AN=56;BaseQRankSum=0.655;DP=482;FS=10.693;HRun=11;HaplotypeScore=90.5116;InbreedingCoeff=0.5330;MQ=74.46;MQ0=5;MQRankSum=-2.708;QD=13.71;ReadPosRankSum=3.953;VQSLOD=4.1341;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:27.33:0,27,269	1/1:1,8:9:23.83:182,24,0	0/1:30,0:15:15.12:15,0,79	0/1:25,0:21:0.03:0,0,122	0/0:18,0:18:28.84:0,29,154	1/1:5,22:27:56.86:459,57,0	1/1:1,8:9:26.92:213,27,0	1/1:7,10:17:29.89:234,30,0	1/1:4,9:13:10.26:202,10,0	1/1:5,11:17:34.95:271,35,0	1/1:2,12:15:31.82:261,32,0	1/1:5,3:8:17.69:128,18,0	1/1:1,12:13:32.92:266,33,0	1/1:3,14:17:41.90:341,42,0	1/1:11,7:19:13.85:124,14,0	1/1:4,5:9:20.82:162,21,0	1/1:6,18:24:35.96:296,36,0	1/1:4,20:25:55.97:449,56,0	1/1:9,10:19:29.90:239,30,0	0/1:7,5:12:3.28:118,0,3	1/1:5,8:13:0.38:127,0,0	1/1:7,11:18:32.83:259,33,0	1/1:2,18:20:50.43:389,50,0	1/1:5,6:11:7.66:152,8,0	1/1:6,14:20:24.91:295,25,0	1/1:6,15:21:44.92:367,45,0	1/1:3,16:21:52.20:406,52,0	1/1:2,8:10:2.09:107,2,0
chr10	22258196	.	G	GA	311.13	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-2.976;DP=470;FS=5.048;HRun=1;HaplotypeScore=113.2509;InbreedingCoeff=0.8866;MQ=75.57;MQ0=4;MQRankSum=4.003;QD=15.56;ReadPosRankSum=-2.767;VQSLOD=2.7443;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:44.12:0,44,464	0/0:13,0:13:38.46:0,38,269	0/0:27,0:15:35.94:0,36,318	0/0:19,0:17:16.24:0,16,200	1/1:3,17:20:42.16:406,42,0	0/0:24,0:24:42.18:0,42,132	0/0:11,0:11:19.98:0,20,63	0/0:13,0:13:20.45:0,20,65	0/0:10,0:10:29.33:0,29,187	0/0:19,0:19:25.67:0,26,80	0/0:18,0:18:26.89:0,27,85	0/0:9,0:9:10.04:0,10,32	0/0:16,0:16:22.67:0,23,70	0/0:15,0:15:29.33:0,29,90	0/0:14,0:15:29.48:0,29,208	0/0:12,0:13:38.53:0,39,281	0/0:19,0:20:38.08:0,38,227	0/0:24,0:25:64.53:0,65,394	0/0:20,0:21:61.59:0,62,456	0/0:11,0:12:32.27:0,32,226	0/0:12,0:12:23.54:0,24,154	0/0:13,0:13:25.35:0,25,85	0/0:21,0:21:40.70:0,41,137	0/0:10,0:10:18.53:0,19,73	0/0:23,0:23:29.63:0,30,108	0/0:20,0:20:32.90:0,33,103	0/0:20,0:20:39.96:0,40,125	0/0:12,0:12:10.94:0,11,35
chr10	22258996	.	TACTC	T	8568.17	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=14.897;DP=682;FS=3.398;HRun=0;HaplotypeScore=114.1854;InbreedingCoeff=0.9998;MQ=89.11;MQ0=0;MQRankSum=-4.523;QD=48.41;ReadPosRankSum=4.539;VQSLOD=5.8678;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,117,3134	1/1:0,11:11:30.10:578,30,0	0/0:27,0:28:67.14:0,67,1727	0/0:24,0:24:71.04:0,71,1683	0/0:37,0:37:99:0,108,2829	0/0:26,0:26:78.21:0,78,1898	0/0:19,0:19:54.19:0,54,1433	0/0:35,0:35:93.30:0,93,2375	1/1:0,22:22:57.20:1096,57,0	0/0:32,0:31:96.27:0,96,2465	0/0:24,0:24:69.24:0,69,1858	0/0:26,0:26:69.17:0,69,1549	0/0:25,0:25:75.24:0,75,1994	0/0:24,0:24:66.19:0,66,1642	1/1:0,25:26:60.21:1154,60,0	1/1:0,22:22:57.20:1101,57,0	1/1:0,13:13:33.11:639,33,0	1/1:1,12:13:33.11:639,33,0	1/1:1,14:15:39.10:673,39,0	1/1:1,32:33:96.23:1761,96,0	1/1:0,22:22:48.16:926,48,0	0/0:19,0:19:51.14:0,51,1199	0/0:24,0:24:66.20:0,66,1679	0/0:32,0:32:96.28:0,96,2369	0/0:27,0:27:78.24:0,78,1954	0/0:24,0:24:72.24:0,72,1862	0/0:26,0:25:78.25:0,78,2035	0/0:12,0:12:36.10:0,36,871
chr10	22260133	.	GAA	G	6935.02	PASS	AB=0.920;AC=43;AF=0.768;AN=56;BaseQRankSum=4.810;DP=556;FS=2.545;HRun=12;HaplotypeScore=92.2063;InbreedingCoeff=0.8967;MQ=72.68;MQ0=3;MQRankSum=-1.767;QD=15.11;ReadPosRankSum=2.953;VQSLOD=4.0673;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:15,1:18:19.62:0,20,607	1/1:3,0:10:10.12:31,10,0	0/0:15,0:14:21.05:0,21,249	0/0:16,0:13:29.55:0,30,324	0/0:9,0:21:51.03:0,51,505	1/1:3,19:22:51.96:527,52,0	1/1:3,16:20:41.81:479,42,0	1/1:8,23:31:69.06:688,69,0	1/1:4,0:22:16.43:75,16,0	1/1:3,28:33:80.90:876,81,0	1/1:0,18:18:48.05:477,48,0	1/1:5,12:18:26.75:327,27,0	1/1:1,16:16:45.10:457,45,0	1/1:3,19:22:48.10:488,48,0	1/1:1,0:22:38.18:118,38,0	1/1:2,0:27:40.83:132,41,0	1/1:4,0:16:17.61:54,18,0	1/1:1,0:16:22.70:66,23,0	1/1:3,0:20:38.96:137,39,0	1/1:7,0:23:23.26:80,23,0	1/1:2,0:20:29.76:92,30,0	1/1:4,18:24:59.60:573,60,0	1/1:2,16:18:42.08:427,42,0	1/1:1,15:16:42.09:427,42,0	1/1:4,16:20:39.06:397,39,0	0/1:21,2:23:8.62:9,0,621	0/0:12,0:12:24.08:0,24,358	0/0:13,0:14:42.14:0,42,608
chr10	22260342	.	GC	G	977.61	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.169;DP=619;FS=3.458;HRun=2;HaplotypeScore=72.9578;InbreedingCoeff=0.9994;MQ=82.10;MQ0=0;MQRankSum=-1.426;QD=33.71;ReadPosRankSum=1.415;VQSLOD=4.0019;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,108,1616	0/0:10,0:10:30.09:0,30,429	0/0:16,0:16:41.28:0,41,597	0/0:18,0:18:42.14:0,42,610	1/1:0,29:29:84.24:1072,84,0	0/0:25,0:25:75.25:0,75,1124	0/0:23,0:23:66.22:0,66,989	0/0:26,0:26:78.26:0,78,1151	0/0:15,0:15:45.15:0,45,674	0/0:21,0:21:63.21:0,63,944	0/0:27,0:27:81.27:0,81,1199	0/0:21,0:21:63.21:0,63,943	0/0:28,0:28:84.25:0,84,1212	0/0:21,0:21:63.21:0,63,942	0/0:20,0:20:57.19:0,57,854	0/0:20,0:20:60.20:0,60,897	0/0:27,0:27:81.27:0,81,1200	0/0:15,0:15:45.15:0,45,674	0/0:21,0:21:63.19:0,63,905	0/0:21,0:21:60.18:0,60,844	0/0:18,0:18:54.18:0,54,809	0/0:20,0:20:60.20:0,60,899	0/0:19,0:19:57.19:0,57,853	0/0:21,0:21:63.21:0,63,943	0/0:25,0:25:72.23:0,72,1058	0/0:31,0:31:90.29:0,90,1313	0/0:25,0:25:75.25:0,75,1122	0/0:20,0:20:57.19:0,57,854
chr10	22260971	.	T	TA	15956.19	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=2.950;DP=539;FS=0.000;HRun=2;HaplotypeScore=143.3319;InbreedingCoeff=0.9939;MQ=66.98;MQ0=0;MQRankSum=-5.743;QD=35.22;ReadPosRankSum=0.962;VQSLOD=4.2624;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:75.11:0,75,858	1/1:0,8:8:24.08:328,24,0	0/0:19,0:19:41.17:0,41,514	0/0:12,0:12:19.92:0,20,225	0/0:30,0:30:90.16:0,90,1075	1/1:2,26:28:78.17:1033,78,0	1/1:3,15:18:42.07:551,42,0	1/1:2,26:28:81.18:1047,81,0	1/1:1,14:15:45.07:583,45,0	1/1:6,19:25:72.07:907,72,0	1/1:6,15:21:53.96:639,54,0	1/1:6,10:16:41.97:493,42,0	1/1:6,23:29:78.12:1018,78,0	1/1:7,12:19:51.03:612,51,0	1/1:3,15:18:48.13:638,48,0	1/1:6,13:19:54.10:685,54,0	1/1:2,16:18:51.02:657,51,0	1/1:0,6:6:18.06:248,18,0	1/1:5,10:15:41.92:515,42,0	1/1:4,22:26:72.24:992,72,0	1/1:1,10:11:24.08:331,24,0	1/1:4,13:17:47.98:589,48,0	1/1:7,21:28:74.98:933,75,0	1/1:0,12:12:36.12:496,36,0	1/1:4,19:23:66.09:845,66,0	1/1:5,15:18:51.14:678,51,0	1/1:6,20:26:69.10:887,69,0	1/1:2,5:7:21.03:250,21,0
chr10	22261015	.	A	AAGGGTTTAGTC	67334.68	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-2.568;DP=584;FS=3.463;HRun=0;HaplotypeScore=176.5889;InbreedingCoeff=0.9931;MQ=68.51;MQ0=0;MQRankSum=-13.277;QD=133.60;ReadPosRankSum=-0.956;VQSLOD=5.2196;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:54.19:0,54,1921	1/1:3,4:7:21.07:1088,21,0	0/0:14,0:14:39.12:0,39,1238	0/0:19,0:19:51.17:0,51,1494	0/0:27,0:27:75.26:0,75,2674	1/1:9,12:20:60.21:2909,60,0	1/1:11,10:21:60.21:2629,60,0	1/1:19,11:30:84.29:3882,84,0	1/1:6,9:16:45.15:2411,45,0	1/1:12,15:28:78.27:3917,78,0	1/1:5,15:23:60.21:2815,60,0	1/1:7,12:20:57.20:3087,57,0	1/1:12,20:34:96.33:4841,96,0	1/1:7,11:19:54.17:2842,54,0	1/1:11,14:25:69.22:3556,69,0	1/1:9,10:20:57.20:2882,57,0	1/1:9,8:17:42.12:1518,42,0	1/1:5,1:6:18.04:652,18,0	1/1:11,4:16:45.14:2000,45,0	1/1:8,21:29:84.29:4335,84,0	1/1:6,2:8:21.06:813,21,0	1/1:4,16:20:57.20:2939,57,0	1/1:5,20:29:72.25:3136,72,0	1/1:8,3:11:30.10:1142,30,0	1/1:10,22:34:96.33:4739,96,0	1/1:11,13:23:66.23:3543,66,0	1/1:11,21:35:90.29:4737,90,0	1/1:2,5:10:18.06:920,18,0
chr10	22261826	.	G	GAT	442.02	PASS	AC=4;AF=0.105;AN=38;BaseQRankSum=-3.191;DP=150;FS=0.000;HRun=0;HaplotypeScore=24.0752;InbreedingCoeff=0.4550;MQ=77.28;MQ0=31;MQRankSum=0.501;QD=24.56;ReadPosRankSum=2.431;VQSLOD=3.5988;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:6:14.84:0,15,172	0/0:1,0:1:3.01:0,3,40	0/0:6,0:3:0.45:0,0,1	0/0:19,0:14:4.50:0,5,17	0/0:2,0:2:3.01:0,3,40	0/0:3,0:3:9.03:0,9,119	0/0:1,0:1:3.01:0,3,40	0/0:29,0:13:36.09:0,36,434	0/0:1,0:1:3.01:0,3,40	./.	0/0:1,0:1:3.01:0,3,40	0/0:2,0:2:6.02:0,6,80	./.	0/0:3,0:2:6.02:0,6,79	./.	0/0:4,0:4:12.04:0,12,158	0/0:20,0:17:42.08:0,42,523	0/0:13,0:13:33.11:0,33,434	./.	0/0:2,0:1:3.01:0,3,40	./.	./.	./.	./.	0/0:3,1:4:6.02:0,6,80	./.	1/1:0,6:6:18.06:312,18,0	1/1:6,6:9:15.05:236,15,0
chr10	22261998	.	T	TAG	84.92	PASS	AB=1.000;AC=5;AF=0.417;AN=12;BaseQRankSum=-0.876;DP=114;FS=2.808;HRun=0;HaplotypeScore=15.2778;MQ=53.19;MQ0=40;MQRankSum=-2.219;QD=1.70;ReadPosRankSum=-0.729;VQSLOD=0.3672;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:6:5.69:0,6,91	./.	0/0:14,0:3:2.80:0,3,14	0/1:27,0:3:0:0,0,0	./.	./.	./.	1/1:7,4:4:11.96:154,12,0	./.	./.	./.	./.	./.	./.	./.	./.	./.	1/1:12,0:8:2.04:6,2,0	./.	./.	./.	./.	./.	./.	./.	0/0:2,0:1:3.01:0,3,43	./.	./.
chr10	22262036	.	GAT	G	58.66	PASS	AC=6;AF=0.429;AN=14;BaseQRankSum=2.615;DP=109;FS=2.452;HRun=0;HaplotypeScore=31.9038;MQ=84.42;MQ0=24;MQRankSum=1.109;QD=2.67;ReadPosRankSum=1.743;VQSLOD=1.0111;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:5.97:0,6,105	./.	0/0:18,0:5:2.22:0,2,7	0/0:30,0:12:1.92:0,2,27	./.	./.	./.	0/0:11,0:7:19.81:0,20,111	./.	./.	./.	./.	./.	./.	./.	./.	./.	1/1:4,0:1:1.82:5,2,0	./.	./.	./.	./.	./.	./.	./.	1/1:2,0:1:3.01:35,3,0	./.	1/1:4,12:13:8.98:101,9,0
chr10	22262068	.	G	GAT	326.26	PASS	AB=0.977;AC=9;AF=0.500;AN=18;BaseQRankSum=-1.684;DP=111;FS=11.975;HRun=0;HaplotypeScore=42.9330;MQ=48.30;MQ0=20;MQRankSum=-0.353;QD=4.66;ReadPosRankSum=-2.598;VQSLOD=0.1945;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:6:6.02:0,6,86	./.	0/1:10,0:1:0:0,0,0	0/0:31,0:10:0.70:0,1,28	./.	./.	./.	0/1:38,3:26:37.98:257,0,38	./.	./.	./.	./.	./.	./.	./.	./.	1/1:3,1:3:6.02:103,6,0	0/0:1,0:1:2.84:0,3,14	./.	./.	./.	./.	./.	./.	./.	1/1:1,0:1:2.04:6,2,0	1/1:2,0:2:3.01:39,3,0	0/1:12,0:10:5.04:5,0,6
chr10	22262333	.	A	ATC	57.30	PASS	AB=1.000;AC=15;AF=0.577;AN=26;BaseQRankSum=1.038;DP=114;FS=3.949;HRun=0;HaplotypeScore=51.7316;InbreedingCoeff=0.3348;MQ=56.63;MQ0=40;MQRankSum=0.000;QD=0.90;ReadPosRankSum=-1.297;VQSLOD=0.9901;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:3,0:2:3.01:0,3,45	./.	0/0:11,0:5:2.99:0,3,23	0/0:22,0:6:5.93:0,6,45	./.	1/1:2,1:3:2.88:15,3,0	./.	1/1:41,3:10:9.05:57,9,0	./.	1/1:1,1:1:2.84:14,3,0	./.	1/1:1,1:2:2.51:10,3,0	./.	1/1:0,1:1:2.88:15,3,0	./.	./.	0/0:8,0:5:3.47:0,3,10	0/1:5,0:2:7.30:7,0,13	0/0:2,0:1:2.04:0,2,6	./.	./.	./.	./.	./.	./.	./.	1/1:1,2:2:5.47:25,5,0	1/1:4,0:4:3.80:19,4,0
chr10	22262342	.	GATAT	G	925.82	PASS	AB=0.861;AC=21;AF=0.808;AN=26;BaseQRankSum=0.372;DP=121;FS=4.959;HRun=0;HaplotypeScore=58.9712;InbreedingCoeff=0.0315;MQ=72.44;MQ0=27;MQRankSum=0.503;QD=7.91;ReadPosRankSum=1.554;VQSLOD=1.0128;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:2,0:2:3.01:0,3,62	./.	0/1:18,0:7:1.85:2,0,73	0/1:33,0:13:8.67:42,0,9	./.	1/1:1,2:3:3.01:33,3,0	./.	0/1:14,19:11:4.41:509,0,4	./.	1/1:1,1:1:3.01:30,3,0	./.	1/1:0,3:3:3.01:31,3,0	./.	1/1:0,1:1:3.01:33,3,0	./.	./.	1/1:4,1:5:2.99:40,3,0	1/1:5,0:3:2.90:25,3,0	./.	./.	./.	./.	./.	./.	./.	1/1:1,1:2:5.88:54,6,0	1/1:1,2:2:6.02:69,6,0	1/1:0,4:4:11.99:151,12,0
chr10	22262374	.	GAT	G	125.80	PASS	AB=0.853;AC=9;AF=0.375;AN=24;BaseQRankSum=2.960;DP=235;FS=4.672;HRun=0;HaplotypeScore=103.5157;InbreedingCoeff=0.1630;MQ=89.00;MQ0=30;MQRankSum=-0.962;QD=0.95;ReadPosRankSum=2.257;VQSLOD=1.8004;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:3,0:3:2.04:6,2,0	./.	0/0:49,0:20:7.52:0,8,116	0/1:107,0:30:7.52:8,0,175	./.	0/1:3,0:3:0:0,0,0	./.	0/0:35,0:20:44.78:0,45,420	./.	./.	./.	0/0:3,0:3:0.47:0,0,1	./.	0/1:1,0:1:0:0,0,0	./.	./.	0/0:7,1:7:10.26:0,10,125	0/0:6,0:5:8.21:0,8,66	./.	./.	./.	./.	./.	./.	./.	1/1:2,1:3:2.91:67,3,0	0/1:3,4:6:55.38:64,0,55	0/1:3,4:6:9.23:71,0,9
chr10	22262481	.	AT	A	286.42	PASS	AC=6;AF=0.176;AN=34;BaseQRankSum=2.700;DP=135;FS=5.648;HRun=1;HaplotypeScore=40.1625;InbreedingCoeff=0.5774;MQ=64.86;MQ0=12;MQRankSum=1.463;QD=22.03;ReadPosRankSum=0.182;VQSLOD=3.3828;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:2,0:2:6.02:0,6,96	./.	0/0:5,1:3:6.46:0,6,49	0/0:19,1:5:2.79:0,3,27	0/0:4,0:4:12.03:0,12,158	1/1:0,7:7:15.02:189,15,0	./.	0/0:30,0:18:51.10:0,51,754	./.	0/0:8,0:8:21.07:0,21,326	0/0:3,0:3:5.77:0,6,73	./.	1/1:0,4:4:12.04:168,12,0	1/1:0,2:2:3.01:42,3,0	./.	0/0:2,0:2:6.02:0,6,95	0/0:18,0:18:35.80:0,36,563	0/0:9,0:9:18.02:0,18,248	0/0:8,0:6:18.04:0,18,263	./.	0/0:3,0:3:6.02:0,6,96	./.	./.	./.	./.	./.	0/0:3,0:3:2.84:0,3,14	0/0:4,0:4:3:0,3,27
chr10	22262576	.	GAT	G	430.82	PASS	AB=0.943;AC=21;AF=0.404;AN=52;BaseQRankSum=7.103;DP=258;FS=5.740;HRun=0;HaplotypeScore=67.1571;InbreedingCoeff=0.0314;MQ=71.82;MQ0=5;MQRankSum=-6.599;QD=3.71;ReadPosRankSum=4.171;VQSLOD=1.1146;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:24.08:0,24,403	0/0:1,0:1:2.98:0,3,22	0/0:6,0:4:0.47:0,0,1	0/0:26,0:14:6.89:0,7,43	1/1:8,0:8:0.05:6,0,0	0/1:7,2:9:33.69:181,0,34	0/1:1,1:2:32.54:33,0,46	0/0:33,0:32:93.27:0,93,1499	1/1:5,0:5:3.81:12,4,0	0/0:15,0:15:33.11:0,33,575	0/0:14,0:14:39.13:0,39,671	1/1:1,4:5:6.02:82,6,0	0/1:10,0:11:63.64:64,0,135	0/1:2,0:2:18.94:33,0,19	0/1:11,0:11:13.47:13,0,62	1/1:3,0:3:2.04:6,2,0	0/0:20,0:20:7.34:0,7,243	1/1:7,0:7:4.07:12,4,0	0/0:8,0:5:0.62:0,1,116	0/0:3,0:3:9.02:0,9,128	0/0:4,0:4:5.99:0,6,68	1/1:2,0:2:3.01:40,3,0	./.	./.	0/1:10,0:10:66.59:67,0,93	0/1:12,0:12:18.02:18,0,55	0/1:13,0:12:6.54:7,0,71	0/1:16,0:16:1.46:1,0,185
chr10	22262578	.	TATATAG	T	1718.94	PASS	AC=24;AF=0.500;AN=48;BaseQRankSum=3.774;DP=265;FS=6.250;HRun=0;HaplotypeScore=76.3675;InbreedingCoeff=0.7067;MQ=70.39;MQ0=5;MQRankSum=-4.753;QD=15.63;ReadPosRankSum=3.724;VQSLOD=1.7369;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:18.06:0,18,443	1/1:1,0:1:3.01:53,3,0	./.	0/0:20,0:12:3.98:0,4,18	1/1:1,7:8:12.04:233,12,0	0/0:7,0:10:17.82:0,18,151	0/0:2,0:2:3.01:0,3,34	0/0:36,0:35:78.25:0,78,1369	1/1:1,4:5:6.02:126,6,0	0/0:14,0:14:27.09:0,27,657	0/0:16,0:16:45.15:0,45,1096	0/0:5,0:5:6.02:0,6,79	0/0:3,0:12:9:0,9,105	0/0:1,0:2:2.97:0,3,20	1/1:2,9:11:15.05:314,15,0	1/1:0,3:3:3.01:63,3,0	1/1:10,10:20:6.49:126,6,0	1/1:2,5:7:6.02:126,6,0	1/1:6,4:7:12.01:175,12,0	./.	1/1:4,0:4:3.01:53,3,0	0/0:0,0:2:2.98:0,3,22	./.	./.	0/0:3,0:13:8.96:0,9,93	1/1:1,0:12:21.89:238,22,0	1/1:1,0:13:14.26:151,14,0	1/1:4,0:16:23.53:239,24,0
chr10	22262584	.	G	GAT	615.92	PASS	AB=1.000;AC=22;AF=0.407;AN=54;BaseQRankSum=5.692;DP=263;FS=5.626;HRun=0;HaplotypeScore=66.5647;InbreedingCoeff=-0.0500;MQ=70.94;MQ0=4;MQRankSum=-5.511;QD=4.40;ReadPosRankSum=1.399;VQSLOD=1.6520;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:27.07:0,27,351	1/1:0,1:1:3.01:53,3,0	0/0:4,0:2:2.80:0,3,13	0/1:21,0:11:3.90:4,0,37	0/1:8,0:8:22.32:83,0,22	0/1:10,0:10:15.32:15,0,102	0/1:2,0:2:7.92:8,0,35	0/0:38,0:37:99:0,101,1331	0/0:5,0:5:4.99:0,5,18	0/0:13,0:13:39.12:0,39,523	0/0:15,0:15:45.15:0,45,617	0/0:6,0:6:9.03:0,9,112	0/1:12,0:12:13.47:13,0,71	0/1:2,0:2:6.72:7,0,19	0/1:10,0:10:23.16:195,0,23	1/1:3,0:3:3.01:43,3,0	0/1:20,0:20:67.05:67,0,105	1/1:6,0:6:6.90:74,7,0	0/1:9,0:6:9.52:44,0,10	0/1:3,0:3:39.20:39,0,73	1/1:2,2:5:6.02:101,6,0	1/1:2,0:2:2.68:11,3,0	./.	0/0:1,0:1:3:0,3,25	0/1:14,0:14:10.43:10,0,75	0/1:12,0:12:1.90:2,0,41	0/0:13,0:12:5.13:0,5,68	0/0:15,0:15:8.79:0,9,153
chr10	22262853	.	GTC	G	1451.31	PASS	AB=0.908;AC=20;AF=0.357;AN=56;BaseQRankSum=15.426;DP=713;FS=2.530;HRun=0;HaplotypeScore=212.5231;InbreedingCoeff=-0.4130;MQ=51.64;MQ0=5;MQRankSum=1.110;QD=3.29;ReadPosRankSum=8.870;VQSLOD=1.5200;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:59,0:59:99:0,151,2777	0/0:8,0:8:6.93:0,7,181	0/0:21,0:6:18.05:0,18,239	0/0:29,0:11:30.09:0,30,408	0/0:17,0:17:51.17:0,51,939	0/1:20,2:22:99:100,0,197	0/1:13,7:20:87.46:87,0,351	0/1:24,3:26:99:102,0,645	0/1:22,0:22:18.50:19,0,138	0/1:16,4:21:99:166,0,349	0/1:10,0:10:24.38:24,0,33	0/1:25,5:30:99:258,0,147	0/1:26,3:29:99:230,0,252	0/1:24,5:29:99:188,0,278	0/1:46,0:46:1.34:1,0,580	0/1:29,0:29:14.28:14,0,241	0/0:44,0:44:4.01:0,4,514	0/1:18,0:18:20.44:20,0,163	0/0:21,0:21:6.82:0,7,237	0/1:25,0:25:6.57:7,0,243	0/1:27,0:26:30.22:30,0,36	0/1:17,1:19:38.68:39,0,163	0/1:19,2:21:51.29:51,0,333	0/1:9,6:15:88.20:129,0,88	0/1:15,4:19:93.79:94,0,188	0/0:26,0:26:22.34:0,22,524	0/0:47,0:47:4.25:0,4,574	1/1:12,0:12:19.26:50,19,0
chr10	22262871	.	CTGTCTG	C	6381.35	PASS	AB=0.867;AC=19;AF=0.339;AN=56;BaseQRankSum=2.378;DP=742;FS=14.064;HRun=0;HaplotypeScore=255.2063;InbreedingCoeff=0.3569;MQ=51.47;MQ0=8;MQRankSum=-6.669;QD=22.63;ReadPosRankSum=0.139;VQSLOD=3.0346;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:58:99:0,164,4224	0/0:8,0:8:22.28:0,22,153	0/0:25,0:6:17.54:0,18,190	0/0:38,0:13:35.79:0,36,533	0/0:22,0:22:62.42:0,62,1419	0/1:15,8:22:30.04:586,0,30	0/1:14,3:17:19.58:86,0,20	0/1:22,0:21:40.37:422,0,40	0/0:24,0:24:62.59:0,63,353	1/1:15,4:19:11.21:523,11,0	0/1:10,1:11:32.08:96,0,32	1/1:19,16:35:1.61:916,2,0	0/1:19,14:33:13.68:995,0,14	1/1:19,11:30:36.95:992,37,0	0/0:38,0:38:95.65:0,96,563	0/0:31,0:31:76.51:0,77,466	0/0:45,0:45:34.06:0,34,506	0/1:18,0:18:29.55:30,0,153	0/0:29,0:26:5.09:0,5,271	0/0:23,0:23:57.62:0,58,342	0/0:38,0:37:81.18:0,81,390	1/1:11,8:19:3.90:568,4,0	1/1:6,9:15:30.05:442,30,0	0/1:17,3:20:34.56:151,0,35	1/1:13,6:19:26.35:575,26,0	0/0:20,0:20:52.18:0,52,296	0/0:41,1:42:68.39:0,68,475	0/0:19,0:19:48.64:0,49,220
chr10	22262875	.	CTG	C	7285.45	PASS	AB=0.879;AC=26;AF=0.464;AN=56;BaseQRankSum=10.903;DP=738;FS=60.984;HRun=0;HaplotypeScore=199.7999;InbreedingCoeff=-0.0740;MQ=51.99;MQ0=8;MQRankSum=-2.742;QD=13.85;ReadPosRankSum=10.909;VQSLOD=1.9622;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:56:99:0,147,2518	0/1:4,3:7:4.43:153,0,4	0/0:24,0:7:17.65:0,18,215	0/0:39,0:15:45.14:0,45,614	0/0:21,0:21:53.23:0,53,781	0/1:26,1:25:74.04:74,0,120	0/0:17,0:17:21.25:0,21,102	0/0:20,0:19:1.09:0,1,78	1/1:12,13:25:4.59:587,5,0	0/1:18,0:18:37.30:54,0,37	0/0:13,0:13:10.19:0,10,77	0/1:34,0:34:80.22:80,0,87	0/1:33,0:33:55.56:56,0,73	0/1:28,0:28:72.53:84,0,73	1/1:12,22:34:57.12:998,57,0	1/1:20,12:32:4.51:646,5,0	0/1:30,16:46:18.26:822,0,18	0/1:9,10:19:38.11:165,0,38	0/1:21,8:26:2.62:538,0,3	1/1:17,7:24:1.64:540,2,0	0/1:29,10:38:58.55:605,0,59	0/1:18,0:18:6.70:76,0,7	0/1:14,0:14:18.59:45,0,19	0/0:22,0:22:23.02:0,23,141	0/1:21,0:21:57.52:82,0,58	1/1:17,2:19:3.42:405,3,0	1/1:24,15:39:55.99:957,56,0	0/1:10,10:20:53.86:317,0,54
chr10	22262881	.	CTG	C	4452.80	PASS	AB=0.761;AC=25;AF=0.446;AN=56;BaseQRankSum=14.129;DP=712;FS=68.931;HRun=0;HaplotypeScore=202.8424;InbreedingCoeff=-0.4555;MQ=52.17;MQ0=9;MQRankSum=-2.016;QD=8.26;ReadPosRankSum=9.537;VQSLOD=1.5526;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:54,1:55:99:0,114,2271	0/1:4,3:7:22.82:87,0,23	0/0:26,0:9:27.07:0,27,373	0/0:34,0:15:39.13:0,39,625	0/0:21,0:21:17.18:0,17,324	0/1:21,6:25:24.72:25,0,223	0/0:17,1:19:4.44:0,4,124	0/0:18,0:17:35.30:0,35,209	0/1:12,13:25:41.11:320,0,41	0/1:11,4:15:55.49:88,0,55	0/1:12,2:14:17.45:17,0,119	0/1:15,16:31:99:143,0,103	0/1:18,13:31:99:118,0,123	0/1:13,11:24:35.08:197,0,35	1/1:13,21:34:3.76:522,4,0	0/1:18,10:29:50.81:381,0,51	0/1:30,15:45:99:407,0,119	0/1:17,3:20:34.53:134,0,35	0/1:19,8:24:73.26:232,0,73	0/1:18,7:25:44.90:297,0,45	0/1:29,10:38:99:331,0,159	0/1:11,7:19:44.96:121,0,45	1/1:2,9:11:6.62:63,7,0	0/1:19,4:23:7.52:8,0,152	0/1:13,6:19:47.63:48,0,68	0/1:16,2:18:38.78:248,0,39	1/1:20,16:36:1.35:436,1,0	0/1:10,10:20:96.43:232,0,96
chr10	22264122	.	A	AT	2732.21	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-12.912;DP=755;FS=0.000;HRun=4;HaplotypeScore=69.8376;InbreedingCoeff=0.9989;MQ=84.57;MQ0=0;MQRankSum=-1.437;QD=36.43;ReadPosRankSum=-2.721;VQSLOD=2.6748;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,147,1641	0/0:9,0:9:27.05:0,27,294	0/0:23,0:23:63.15:0,63,696	0/0:23,0:23:56.70:0,57,622	0/0:24,0:24:63.17:0,63,708	0/0:29,0:29:81.21:0,81,909	0/0:26,0:26:75.21:0,75,850	1/1:1,29:30:87.26:1151,87,0	0/0:23,0:23:66.19:0,66,749	1/1:0,27:27:81.27:1108,81,0	1/1:2,16:18:45.15:616,45,0	0/0:29,0:29:87.25:0,87,987	0/0:32,0:32:96.24:0,96,1070	0/0:26,0:26:75.21:0,75,851	0/0:37,0:37:99:0,108,1215	0/0:38,0:38:99:0,111,1241	0/0:27,0:27:75.20:0,75,840	0/0:18,0:18:51.15:0,51,578	0/0:18,0:18:51.13:0,51,569	0/0:23,0:23:66.19:0,66,748	0/0:25,0:25:75.21:0,75,851	0/0:27,0:27:75.21:0,75,850	0/0:23,0:23:69.20:0,69,783	0/0:32,0:32:96.16:0,96,1039	0/0:28,0:28:81.23:0,81,919	0/0:36,1:37:67.25:0,67,1142	0/0:41,0:41:99:0,108,1225	0/0:9,0:9:23.95:0,24,272
chr10	22265132	.	A	AT	9100.83	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=0.174;DP=575;FS=0.320;HRun=8;HaplotypeScore=167.2124;InbreedingCoeff=0.9971;MQ=80.94;MQ0=0;MQRankSum=-2.858;QD=28.98;ReadPosRankSum=1.272;VQSLOD=2.7494;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:69:0,69,617	0/0:11,0:11:32.99:0,33,293	0/0:23,0:23:48.62:0,49,435	0/0:9,0:9:18.89:0,19,164	0/0:32,0:32:78.02:0,78,702	1/1:3,22:25:69.15:780,69,0	1/1:2,17:19:51.15:589,51,0	1/1:6,22:28:69.14:754,69,0	0/0:19,0:19:51.90:0,52,463	1/1:2,14:16:45.13:513,45,0	1/1:1,21:22:39.05:700,39,0	1/1:1,16:17:45.12:508,45,0	1/1:2,15:17:42.12:477,42,0	1/1:2,14:16:42.07:469,42,0	0/0:27,0:27:68.01:0,68,621	0/0:22,0:22:29.64:0,30,513	0/0:23,0:23:62.88:0,63,566	0/0:10,0:10:26.97:0,27,238	0/0:24,0:24:66.04:0,66,602	0/0:32,0:32:87.04:0,87,792	0/0:6,0:6:18.01:0,18,164	1/1:1,18:19:51.15:589,51,0	1/1:3,22:25:63.19:727,63,0	1/1:2,17:19:51.15:589,51,0	1/1:4,20:24:60.18:692,60,0	1/1:4,24:28:72.20:820,72,0	1/1:7,24:32:35.98:653,36,0	1/1:0,7:7:21.06:242,21,0
chr10	22265452	.	C	CT	9204.39	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-15.286;DP=666;FS=5.102;HRun=8;HaplotypeScore=67.8624;InbreedingCoeff=0.9936;MQ=81.54;MQ0=0;MQRankSum=-2.364;QD=28.94;ReadPosRankSum=0.647;VQSLOD=5.2427;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:60.01:0,60,543	0/0:12,0:12:33.02:0,33,302	0/0:24,0:25:50.53:0,51,427	0/0:14,0:14:26.97:0,27,235	0/0:31,0:31:78.02:0,78,709	1/1:4,36:39:99:1177,102,0	1/1:4,22:26:60.18:693,60,0	1/1:6,28:34:81.21:920,81,0	0/0:18,0:18:45.02:0,45,412	1/1:3,16:19:45.59:511,46,0	1/1:1,24:25:66.15:747,66,0	1/1:3,17:20:54.16:618,54,0	1/1:2,21:24:35.57:664,36,0	1/1:2,25:27:72.21:828,72,0	0/0:32,0:32:84.04:0,84,769	0/0:21,0:21:63.02:0,63,572	0/0:21,1:22:16.40:0,16,404	0/0:9,0:9:24.01:0,24,220	0/0:25,0:25:57.02:0,57,521	0/0:28,0:28:78.03:0,78,714	0/0:18,0:18:42.01:0,42,380	1/1:1,24:26:65.99:727,66,0	1/1:2,27:29:66.67:762,67,0	1/1:0,25:25:75.22:866,75,0	1/1:2,21:23:60.18:693,60,0	0/0:26,0:26:63.03:0,63,577	0/0:40,0:40:93.04:0,93,851	0/0:4,0:4:12.01:0,12,110
chr10	22267161	.	GCATACAACGGT	G	31687.21	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=16.334;DP=689;FS=0.338;HRun=0;HaplotypeScore=267.9975;InbreedingCoeff=0.9472;MQ=65.97;MQ0=0;MQRankSum=-17.099;QD=62.75;ReadPosRankSum=2.289;VQSLOD=4.3104;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,126,6722	1/1:2,9:11:21.07:716,21,0	0/0:16,0:16:42.14:0,42,1817	0/0:13,0:13:30.02:0,30,1046	0/0:30,0:30:81.26:0,81,3951	1/1:2,22:24:51.18:1669,51,0	1/1:5,31:36:78.27:2659,78,0	1/1:7,17:24:48.15:1261,48,0	1/1:3,18:21:39.13:1330,39,0	1/1:6,23:29:66.23:2060,66,0	1/1:2,19:21:54.19:1840,54,0	1/1:6,24:30:54.19:1841,54,0	1/1:4,35:39:87.30:2901,87,0	1/1:3,23:26:48.03:1504,48,0	0/0:36,0:36:99:0,99,5052	0/0:47,0:47:99:0,135,6607	1/1:7,14:21:18.06:614,18,0	1/1:1,2:3:3.01:102,3,0	1/1:6,10:16:24.02:383,24,0	1/1:7,28:35:75.26:2490,75,0	1/1:5,12:17:14.75:511,15,0	1/1:4,21:25:48.16:1521,48,0	1/1:4,17:21:45.15:1468,45,0	1/1:3,16:19:8.77:307,9,0	1/1:3,16:19:30.10:1023,30,0	1/1:4,28:32:81.28:2523,81,0	1/1:2,23:25:54.18:1841,54,0	1/1:0,11:11:33.11:1124,33,0
chr10	22267508	.	ATAT	A	13115.81	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=13.692;DP=473;FS=5.955;HRun=0;HaplotypeScore=73.3087;InbreedingCoeff=0.9881;MQ=69.21;MQ0=0;MQRankSum=-1.302;QD=43.14;ReadPosRankSum=1.303;VQSLOD=6.2322;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:51.18:0,51,1155	0/0:4,0:4:12.04:0,12,272	0/0:9,0:9:17.56:0,18,304	0/0:7,0:7:14.88:0,15,232	0/0:27,0:27:81.26:0,81,1721	1/1:0,24:24:66.23:1098,66,0	1/1:0,17:17:51.17:845,51,0	1/1:4,33:37:99:1565,99,0	0/0:10,0:10:30.09:0,30,637	1/1:2,31:33:87.09:1373,87,0	1/1:0,22:22:57.08:884,57,0	1/1:1,11:12:30.10:496,30,0	1/1:1,33:34:90.31:1494,90,0	1/1:0,14:14:42.14:698,42,0	0/0:10,0:10:27.09:0,27,585	0/0:17,0:17:48.16:0,48,1066	0/0:12,0:12:33.09:0,33,701	0/0:6,0:6:15.05:0,15,340	0/0:15,0:15:42.14:0,42,952	0/0:25,0:25:75.26:0,75,1637	0/0:9,0:9:24.08:0,24,544	1/1:3,9:12:24.08:398,24,0	1/1:0,16:16:48.04:731,48,0	1/1:0,7:7:18.06:298,18,0	1/1:0,19:19:51.17:847,51,0	1/1:2,17:19:51.17:844,51,0	1/1:1,23:24:60.20:996,60,0	1/1:3,11:14:33.11:548,33,0
chr10	22267678	.	G	GAA	4463.99	PASS	AB=1.000;AC=34;AF=0.607;AN=56;BaseQRankSum=-2.033;DP=294;FS=5.625;HRun=7;HaplotypeScore=62.8585;InbreedingCoeff=0.6000;MQ=78.22;MQ0=1;MQRankSum=0.134;QD=20.48;ReadPosRankSum=-0.438;VQSLOD=2.5373;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:27.07:0,27,314	0/1:9,0:9:3.06:3,0,61	0/0:11,0:11:20.96:0,21,195	0/0:6,0:6:9:0,9,86	0/1:25,0:25:22.53:23,0,141	1/1:0,19:19:39.13:640,39,0	1/1:2,7:9:15.05:246,15,0	1/1:7,20:29:66.02:975,66,0	0/0:6,0:6:13.06:0,13,53	1/1:6,12:19:39.07:564,39,0	1/1:2,10:12:32.93:411,33,0	1/1:0,4:5:9.03:148,9,0	1/1:3,7:10:15.05:245,15,0	1/1:2,1:3:3.01:49,3,0	0/1:6,0:6:13.70:66,0,14	0/0:8,0:8:15.07:0,15,58	0/0:13,0:13:25.11:0,25,103	0/0:11,0:11:3.13:0,3,84	0/1:13,0:13:0.49:0,0,65	0/0:8,0:8:21.10:0,21,91	0/0:2,0:2:2.55:0,3,10	1/1:1,0:1:3:28,3,0	1/1:7,0:7:6:54,6,0	1/1:1,1:2:3.01:49,3,0	1/1:1,17:18:39.13:640,39,0	1/1:0,1:14:36.33:186,36,0	1/1:0,0:10:24.83:87,25,0	1/1:1,0:6:14.60:50,15,0
chr10	22267832	.	C	CT	1295.22	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-7.807;DP=453;FS=3.820;HRun=2;HaplotypeScore=41.8673;InbreedingCoeff=0.9357;MQ=84.84;MQ0=0;MQRankSum=-1.105;QD=44.66;ReadPosRankSum=-0.547;VQSLOD=2.7184;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:42.14:0,42,587	0/0:3,0:3:9.03:0,9,126	0/0:14,0:14:35.80:0,36,468	0/0:15,0:15:42.12:0,42,556	1/1:0,29:29:87.30:1390,87,0	0/0:21,0:20:63.21:0,63,863	0/0:6,0:6:18.06:0,18,252	0/0:41,0:41:99:0,120,1649	0/0:11,0:11:33.10:0,33,446	0/0:25,0:25:75.25:0,75,1049	0/0:17,0:17:48.16:0,48,671	0/0:15,0:15:45.15:0,45,629	0/0:13,0:13:39.13:0,39,545	0/0:16,0:16:48.15:0,48,655	0/0:16,0:16:45.15:0,45,629	0/0:12,0:12:36.12:0,36,504	0/0:11,0:11:30.09:0,30,403	0/0:16,0:16:45.15:0,45,624	0/0:14,0:14:39.13:0,39,546	0/0:22,0:22:66.22:0,66,920	0/0:19,0:19:57.19:0,57,795	0/0:11,0:11:33.11:0,33,461	0/0:13,0:13:39.12:0,39,530	0/0:12,0:12:36.08:0,36,481	0/0:19,0:19:54.18:0,54,755	0/0:9,0:9:27.09:0,27,378	0/0:23,0:23:66.22:0,66,920	0/0:16,0:16:48.16:0,48,665
chr10	22268601	.	GA	G	309.73	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.563;DP=644;FS=2.082;HRun=8;HaplotypeScore=60.0248;InbreedingCoeff=0.9387;MQ=72.72;MQ0=1;MQRankSum=-2.418;QD=17.21;ReadPosRankSum=-0.043;VQSLOD=3.5535;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,17:18:42.07:405,42,0	0/0:16,0:16:45.14:0,45,543	0/0:13,0:13:33.09:0,33,377	0/0:12,0:12:10.68:0,11,193	0/0:34,0:34:90.25:0,90,1060	0/0:31,0:31:87.24:0,87,1027	0/0:19,0:19:51.11:0,51,596	0/0:27,0:27:72.20:0,72,848	0/0:22,0:22:63.16:0,63,734	0/0:30,0:30:87.24:0,87,1023	0/0:27,0:27:69.20:0,69,822	0/0:22,0:22:60.18:0,60,725	0/0:26,0:26:69.20:0,69,821	0/0:37,0:37:99:0,102,1228	0/0:26,0:26:69.20:0,69,822	0/0:31,0:30:81.23:0,81,956	0/0:33,0:33:84.26:0,84,1014	0/0:6,0:6:18.05:0,18,216	0/0:23,0:23:60.18:0,60,721	0/0:18,0:18:45.14:0,45,543	0/0:20,0:20:57.17:0,57,685	0/0:26,0:26:66.20:0,66,796	0/0:23,0:23:66.16:0,66,762	0/0:15,0:15:39.12:0,39,471	0/0:21,0:21:57.17:0,57,680	0/0:26,0:26:75.23:0,75,906	0/0:37,0:37:99:0,108,1300	0/0:5,0:5:15.05:0,15,181
chr10	22272372	.	C	CT	6571.27	PASS	AB=0.579;AC=31;AF=0.554;AN=56;BaseQRankSum=-14.151;DP=494;FS=32.166;HRun=10;HaplotypeScore=61.4551;InbreedingCoeff=0.9048;MQ=75.67;MQ0=0;MQRankSum=-1.034;QD=25.37;ReadPosRankSum=2.706;VQSLOD=3.4596;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:2,0:16:28.51:0,29,82	0/1:3,8:11:25.23:168,0,25	0/0:10,0:11:31.20:0,31,230	0/0:11,0:11:17.13:0,17,162	0/0:5,0:36:59.53:0,60,171	1/1:2,12:13:14.45:359,14,0	1/1:3,8:11:21.05:224,21,0	0/0:33,0:33:68.85:0,69,561	1/1:2,13:15:30.08:320,30,0	0/0:23,0:23:59.87:0,60,487	0/0:25,0:25:62.91:0,63,517	1/1:2,13:16:44.91:450,45,0	1/1:6,14:20:41.63:514,42,0	1/1:2,15:17:14.50:359,15,0	0/0:2,0:13:18.33:0,18,53	0/0:2,0:19:34.63:0,35,100	1/1:2,16:18:39.10:416,39,0	1/1:1,9:10:24.06:256,24,0	1/1:0,9:9:26.88:259,27,0	1/1:5,27:32:84.10:863,84,0	1/1:0,2:2:6.02:64,6,0	1/1:2,14:16:42.11:448,42,0	1/1:2,24:26:44.45:679,44,0	1/1:2,12:14:36.09:384,36,0	1/1:2,26:28:56.56:807,57,0	0/0:15,0:15:44.94:0,45,367	0/0:24,0:23:62.87:0,63,514	0/0:8,0:9:25.99:0,26,200
chr10	22273250	.	CTG	C	3204.89	PASS	AB=0.964;AC=41;AF=0.759;AN=54;BaseQRankSum=-5.929;DP=565;FS=0.000;HRun=0;HaplotypeScore=141.3677;InbreedingCoeff=-0.1313;MQ=41.34;MQ0=32;MQRankSum=4.563;QD=5.92;ReadPosRankSum=-2.311;VQSLOD=2.9925;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:17,2:16:8.89:62,9,0	1/1:9,0:9:5.82:50,6,0	0/0:16,0:8:5.85:0,6,37	0/1:22,0:4:3.40:15,0,3	1/1:27,1:24:13.57:100,14,0	0/1:25,1:26:8.04:81,0,8	0/1:28,1:21:10.73:126,0,11	1/1:37,0:34:85.79:611,86,0	1/1:21,2:21:17.04:141,17,0	0/1:26,2:22:54.42:248,0,54	1/1:18,4:20:11.15:116,11,0	1/1:15,1:16:5.48:144,5,0	1/1:25,1:24:7.99:104,8,0	0/1:22,2:23:11.16:55,0,11	1/1:14,1:15:11.62:99,12,0	1/1:19,1:18:15.70:184,16,0	1/1:9,0:8:14.18:92,14,0	0/1:7,0:5:11.60:12,0,12	0/1:17,0:16:40.72:108,0,41	1/1:35,1:34:26.94:183,27,0	./.	1/1:9,1:8:6.73:66,7,0	0/1:22,2:24:3.10:85,0,3	0/1:11,0:9:11.13:16,0,11	0/1:13,1:13:1.90:19,0,2	0/1:33,0:31:19.64:271,0,20	1/1:16,2:17:30.40:217,30,0	1/1:17,0:14:3.07:143,3,0
chr10	22273258	.	C	CTCTCTG	2850.28	PASS	AB=0.949;AC=29;AF=0.537;AN=54;BaseQRankSum=-3.833;DP=553;FS=0.650;HRun=0;HaplotypeScore=175.0797;InbreedingCoeff=-0.0405;MQ=38.45;MQ0=38;MQRankSum=0.823;QD=6.82;ReadPosRankSum=0.684;VQSLOD=2.6388;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:18:5.85:0,6,36	1/1:8,0:8:3.95:12,4,0	0/0:10,0:4:2.96:0,3,19	0/0:17,0:3:1.02:0,1,4	0/1:27,0:23:32.58:33,0,40	0/1:20,0:25:10.42:178,0,10	0/1:25,0:19:11.42:67,0,11	1/1:36,0:33:50.69:541,51,0	0/1:21,0:20:29.47:36,0,29	0/1:25,0:22:97.52:263,0,98	0/1:18,1:19:10.65:18,0,11	1/1:16,1:17:6.42:258,6,0	1/1:20,2:22:19.12:381,19,0	1/1:20,3:23:24.38:588,24,0	0/0:15,0:15:5.97:0,6,33	0/0:23,0:21:11.64:0,12,115	1/1:10,0:9:5.74:51,6,0	1/1:6,0:4:3.48:37,3,0	0/1:17,0:15:55.74:88,0,56	0/1:35,0:32:38.95:41,0,39	./.	1/1:9,2:8:3.01:44,3,0	0/1:22,2:25:8.84:45,0,9	0/1:9,2:9:48.42:101,0,48	0/0:15,0:14:0.38:0,0,1	0/1:34,0:31:99:114,0,134	0/0:23,0:21:3.89:0,4,58	1/1:13,0:10:16.11:114,16,0
chr10	22273260	.	CTG	C	1489.89	PASS	AB=0.991;AC=33;AF=0.611;AN=54;BaseQRankSum=-1.594;DP=526;FS=7.817;HRun=0;HaplotypeScore=147.7811;InbreedingCoeff=-0.2073;MQ=36.36;MQ0=38;MQRankSum=1.725;QD=3.12;ReadPosRankSum=-0.911;VQSLOD=2.1840;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:17:16.05:16,0,27	1/1:8,0:8:5.32:34,5,0	0/0:6,0:1:2.80:0,3,13	0/0:11,0:2:0.94:0,1,2	0/1:27,0:23:13.93:41,0,14	0/1:25,0:25:9.45:9,0,109	0/1:27,0:19:1.66:2,0,109	0/1:34,0:31:30.89:31,0,372	1/1:21,0:20:17.07:142,17,0	0/1:26,0:21:99:208,0,122	1/1:20,1:19:11.58:82,12,0	1/1:17,0:17:11.30:136,11,0	1/1:22,0:21:0.06:75,0,0	0/1:20,2:21:41.05:66,0,41	1/1:14,0:14:1.33:28,1,0	1/1:21,0:21:14.99:99,15,0	0/1:10,0:9:5.88:28,0,6	0/0:6,0:4:1.27:0,1,50	0/1:15,0:13:70.03:70,0,87	1/1:34,0:31:24.20:155,24,0	./.	1/1:9,1:7:0.74:16,1,0	0/1:23,1:24:18.61:20,0,19	0/1:11,0:9:15.98:16,0,46	0/0:13,1:13:2.31:0,2,7	0/1:32,0:29:99:119,0,158	1/1:22,0:20:8.19:194,8,0	0/1:12,0:9:18.35:49,0,18
chr10	22273262	.	GTC	G	616.67	PASS	AB=0.962;AC=23;AF=0.442;AN=52;BaseQRankSum=1.902;DP=519;FS=3.458;HRun=0;HaplotypeScore=150.1340;InbreedingCoeff=-0.0802;MQ=34.08;MQ0=39;MQRankSum=2.000;QD=1.77;ReadPosRankSum=1.136;VQSLOD=2.7662;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:17:6.02:0,6,72	0/1:8,1:9:18.68:21,0,19	0/0:6,0:1:3.01:0,3,32	./.	0/0:24,0:20:8.85:0,9,86	0/1:24,0:24:22.05:22,0,63	0/1:25,1:18:11.13:11,0,93	0/0:34,0:31:49.82:0,50,473	0/1:18,1:18:20.08:38,0,20	0/1:27,0:22:99:131,0,148	0/1:19,1:18:0:0,0,0	1/1:16,1:17:12.79:112,13,0	0/1:19,1:19:28.96:30,0,29	0/1:21,1:21:36.54:37,0,66	1/1:12,2:14:5.03:38,5,0	1/1:15,7:21:14.02:141,14,0	0/1:9,1:9:0.25:0,0,0	0/0:5,1:4:3.01:0,3,51	0/1:14,0:12:15.55:16,0,199	1/1:31,3:30:2.41:60,2,0	./.	0/0:12,0:9:0.84:0,1,3	1/1:23,1:24:0.51:18,1,0	0/1:11,0:10:28.60:59,0,29	0/0:13,0:13:2.35:0,2,7	0/0:34,0:31:11.23:0,11,322	0/1:22,0:20:5.69:6,0,49	0/1:12,0:9:4.85:21,0,5
chr10	22273264	.	C	CTCTG	1431.62	PASS	AB=0.954;AC=26;AF=0.500;AN=52;BaseQRankSum=1.199;DP=528;FS=6.481;HRun=0;HaplotypeScore=167.6441;InbreedingCoeff=-0.2906;MQ=33.60;MQ0=38;MQRankSum=-0.181;QD=3.58;ReadPosRankSum=1.240;VQSLOD=2.0092;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:17:7.50:0,8,51	0/1:10,0:10:18.03:40,0,18	0/0:6,0:1:2.96:0,3,19	./.	0/0:25,0:21:11.84:0,12,112	0/1:17,9:26:17.88:127,0,18	0/1:26,0:18:13.27:13,0,61	0/1:33,0:30:19.18:19,0,108	0/1:20,1:20:24.60:74,0,25	0/1:28,0:22:78.03:84,0,78	0/0:21,0:19:2.74:0,3,12	1/1:15,1:16:20.37:263,20,0	0/1:20,0:19:10.61:138,0,11	0/1:22,1:22:9.39:130,0,9	1/1:15,0:15:1.43:13,1,0	0/1:22,0:21:33.96:34,0,48	1/1:10,0:9:3.13:33,3,0	1/1:7,0:5:2.99:39,3,0	0/1:15,0:13:21.95:22,0,137	0/1:33,0:29:17.82:28,0,18	./.	1/1:8,3:9:0.47:1,0,0	1/1:18,5:24:2.49:78,2,0	0/1:8,4:12:41.65:94,0,42	0/0:7,5:14:0:0,0,0	0/1:33,0:30:99:215,0,257	0/0:22,0:20:0.46:0,0,82	0/1:12,0:9:1.85:124,0,2
chr10	22273270	.	CTG	C	1764.08	PASS	AB=0.920;AC=28;AF=0.560;AN=50;BaseQRankSum=0.521;DP=517;FS=9.703;HRun=0;HaplotypeScore=169.6231;InbreedingCoeff=-0.2775;MQ=32.07;MQ0=36;MQRankSum=-0.502;QD=3.92;ReadPosRankSum=0.164;VQSLOD=1.6528;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:16:11.95:12,0,83	1/1:6,4:10:5.80:64,6,0	./.	./.	0/1:23,1:20:1.77:2,0,56	0/1:23,4:27:28.45:90,0,28	0/1:20,7:19:23.38:23,0,139	0/1:37,0:34:99:231,0,162	1/1:21,1:21:4.43:107,4,0	0/1:25,7:25:99:344,0,102	1/1:14,4:16:2.60:10,3,0	0/1:13,3:16:3.26:109,0,3	1/1:15,4:18:9.20:119,9,0	0/1:19,5:23:47.21:110,0,47	0/1:15,0:15:14.56:17,0,15	0/1:25,0:24:21.89:44,0,22	1/1:8,0:7:5.54:34,6,0	0/0:7,0:5:5.85:0,6,53	0/1:12,1:11:99:103,0,113	1/1:27,6:29:14.83:111,15,0	./.	0/0:13,0:10:3.75:0,4,11	0/0:23,2:25:0.19:0,0,13	0/1:13,1:12:43.61:64,0,44	0/0:12,2:14:2.35:0,2,7	0/1:29,2:27:98.99:99,0,180	0/1:22,1:21:12.80:128,0,13	1/1:9,1:7:7.30:85,7,0
chr10	22273274	.	CTCTG	C	286.26	PASS	AB=0.987;AC=16;AF=0.320;AN=50;BaseQRankSum=5.421;DP=536;FS=9.824;HRun=0;HaplotypeScore=189.0660;InbreedingCoeff=-0.2413;MQ=31.58;MQ0=36;MQRankSum=-2.430;QD=0.91;ReadPosRankSum=1.396;VQSLOD=2.0794;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:21,1:16:12.05:12,0,88	0/1:10,0:10:13.80:14,0,16	./.	./.	0/0:24,0:20:4.89:0,5,87	0/1:27,0:27:9.78:10,0,97	0/0:27,0:19:19.99:0,20,207	0/0:48,0:45:99:0,123,1183	0/1:20,0:19:29.81:39,0,30	0/1:34,1:28:99:180,0,377	1/1:22,0:19:2.99:24,3,0	0/1:14,0:14:4.40:4,0,98	0/1:18,0:17:15.12:15,0,54	0/1:27,0:26:16.18:16,0,91	0/0:15,0:15:2.22:0,2,21	0/1:26,0:25:13.60:14,0,144	0/0:9,0:8:2.12:0,2,37	0/0:7,0:5:5.81:0,6,57	0/0:16,0:14:19.62:0,20,357	1/1:32,0:28:3.93:12,4,0	./.	0/0:13,0:10:6.18:0,6,25	0/0:27,0:27:11.03:0,11,65	0/0:14,0:12:6.38:0,6,74	0/0:13,1:14:1.48:0,1,5	0/1:31,1:28:35.01:35,0,268	0/1:18,1:17:41.14:41,0,52	0/1:10,0:7:9.06:9,0,69
chr10	22273276	.	CTG	C	610.07	PASS	AB=0.993;AC=22;AF=0.440;AN=50;BaseQRankSum=3.998;DP=539;FS=2.661;HRun=0;HaplotypeScore=178.4645;InbreedingCoeff=-0.2129;MQ=32.07;MQ0=37;MQRankSum=-1.576;QD=1.61;ReadPosRankSum=1.159;VQSLOD=2.5937;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:17:12.06:12,0,98	1/1:10,0:10:7.49:35,7,0	./.	./.	0/0:23,0:19:5.03:0,5,64	0/1:28,0:28:24.06:24,0,62	0/0:28,0:20:7.50:0,8,119	0/0:49,0:45:99:0,128,1285	0/1:20,0:19:1.70:62,0,2	0/1:32,2:27:99:212,0,192	1/1:19,2:18:2.99:24,3,0	1/1:16,0:16:12.18:84,12,0	0/1:18,0:17:17.12:17,0,32	0/1:27,0:26:35.23:35,0,90	0/0:15,0:15:2.19:0,2,21	0/1:25,1:25:25.09:25,0,126	0/0:9,0:8:1.69:0,2,14	0/1:7,0:5:21.89:22,0,48	0/0:15,0:13:2.42:0,2,337	1/1:31,0:27:10.89:55,11,0	./.	0/0:13,0:10:6.11:0,6,21	0/1:27,0:27:6.30:10,0,6	0/1:14,0:12:20.64:21,0,49	0/1:15,0:15:1.57:12,0,2	0/1:33,0:28:34.20:34,0,344	0/1:19,0:17:55.01:55,0,68	0/1:10,0:7:17.33:17,0,35
chr10	22273278	.	GTC	G	972.07	PASS	AB=0.899;AC=21;AF=0.438;AN=48;BaseQRankSum=-0.813;DP=545;FS=1.229;HRun=0;HaplotypeScore=178.0002;InbreedingCoeff=-0.1780;MQ=32.46;MQ0=36;MQRankSum=3.791;QD=2.76;ReadPosRankSum=-1.860;VQSLOD=2.1454;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,1:17:6.02:0,6,88	0/1:8,2:10:0.66:1,0,6	./.	./.	0/0:23,0:19:5.03:0,5,59	0/1:26,1:27:36.52:101,0,37	0/1:27,2:21:37.73:56,0,38	0/0:52,0:49:99:0,132,1725	0/1:14,6:19:27:78,0,27	0/1:30,6:29:99:102,0,355	./.	1/1:16,0:16:4.52:149,5,0	0/1:18,0:17:27.62:28,0,40	0/1:26,0:25:31.14:96,0,31	1/1:12,4:16:4.49:25,4,0	0/1:20,7:26:99:106,0,106	0/0:3,6:8:2.42:0,2,29	0/1:4,3:5:34.64:58,0,35	0/0:15,0:13:31.84:0,32,385	0/1:24,6:26:7.31:70,0,7	./.	1/1:13,0:10:2.86:16,3,0	1/1:26,1:27:7.10:76,7,0	0/1:16,0:14:62.97:86,0,63	0/1:15,0:15:1.48:35,0,1	0/0:32,0:27:27.69:0,28,497	0/1:19,0:17:33.12:33,0,77	0/0:10,0:7:5.18:0,5,84
chr10	22273284	.	CTG	C	413.56	PASS	AB=0.979;AC=18;AF=0.360;AN=50;BaseQRankSum=4.114;DP=560;FS=0.000;HRun=0;HaplotypeScore=175.5880;InbreedingCoeff=-0.4320;MQ=33.38;MQ0=34;MQRankSum=-1.723;QD=1.12;ReadPosRankSum=0.158;VQSLOD=1.9144;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:17:5.95:0,6,70	0/1:10,0:10:8.91:9,0,39	./.	./.	0/0:21,1:18:7.06:0,7,70	0/1:27,0:27:29.77:30,0,65	0/0:25,0:17:8.12:0,8,149	0/0:55,0:52:77.82:0,78,1282	0/1:20,1:20:10.83:96,0,11	0/1:33,0:27:56.55:57,0,405	1/1:21,1:19:0.89:2,1,0	0/1:17,0:17:21.47:21,0,75	0/0:17,0:16:3.91:0,4,55	0/1:23,0:22:54.27:54,0,75	0/1:18,0:18:2.60:3,0,32	0/1:28,0:27:25.73:26,0,139	0/0:12,0:11:10.69:0,11,81	0/1:8,0:6:18.77:19,0,24	0/0:15,0:14:19.89:0,20,321	0/1:32,1:29:24.72:39,0,25	./.	0/0:12,0:9:9.92:0,10,57	0/1:29,0:29:6.07:6,0,44	0/1:17,1:16:11.81:12,0,99	0/1:16,0:16:7:7,0,23	0/1:31,2:28:41.69:42,0,452	0/1:18,4:20:38.33:123,0,38	0/1:10,0:7:6.73:7,0,72
chr10	22273286	.	G	GTC	1870.48	PASS	AB=0.880;AC=12;AF=0.240;AN=50;BaseQRankSum=1.463;DP=560;FS=2.628;HRun=0;HaplotypeScore=180.5969;InbreedingCoeff=-0.3637;MQ=34.43;MQ0=34;MQRankSum=-3.686;QD=7.09;ReadPosRankSum=2.415;VQSLOD=3.5181;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:18:3.01:0,3,41	0/1:10,0:10:33.63:34,0,42	./.	./.	0/0:24,0:20:4.26:0,4,45	0/0:27,1:28:4.82:0,5,230	0/0:24,0:16:24.07:0,24,287	0/1:28,24:49:99:1021,0,399	0/0:18,2:19:8.38:0,8,46	0/1:29,3:26:99:262,0,235	0/0:20,1:18:2.68:0,3,11	0/0:16,0:16:17.14:0,17,270	0/1:13,4:16:34.36:34,0,111	0/1:21,2:22:80.41:80,0,157	0/0:19,0:19:7.66:0,8,73	0/0:31,0:30:6.78:0,7,133	0/1:10,2:11:43.01:43,0,73	0/1:7,1:6:41.06:41,0,89	0/1:13,2:14:99:123,0,147	0/1:28,3:27:27.31:27,0,90	./.	0/0:12,0:9:9.48:0,9,95	0/0:28,3:31:11.06:0,11,121	0/0:18,0:16:21.03:0,21,252	0/0:15,2:17:8.78:0,9,79	0/1:30,2:27:99:126,0,257	0/1:20,2:20:40.63:142,0,41	0/1:8,2:8:9.26:75,0,9
chr10	22273288	.	CTCTG	C	1667.23	PASS	AB=0.983;AC=18;AF=0.360;AN=50;BaseQRankSum=4.237;DP=580;FS=2.335;HRun=0;HaplotypeScore=190.5515;InbreedingCoeff=-0.4091;MQ=35.34;MQ0=35;MQRankSum=-4.197;QD=4.29;ReadPosRankSum=1.515;VQSLOD=2.8940;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:18:4.56:0,5,46	0/1:10,0:10:14.77:15,0,86	./.	./.	0/1:25,0:20:4.28:4,0,91	0/0:28,1:29:23.38:0,23,496	0/0:22,2:16:24:0,24,522	0/1:52,0:49:99:724,0,696	0/1:19,1:19:18.13:18,0,141	0/1:33,1:28:99:247,0,539	1/1:22,0:19:4.23:26,4,0	0/0:16,0:16:30.57:0,31,647	0/1:16,1:16:35.25:35,0,296	0/1:20,2:21:64.11:64,0,303	0/1:19,0:19:46.48:46,0,69	0/1:31,0:30:65.92:66,0,208	0/1:12,0:11:5.57:6,0,156	0/1:8,0:6:22.09:22,0,151	0/1:15,1:16:90.41:90,0,299	0/1:33,0:29:20.98:21,0,247	./.	0/0:12,2:11:12.92:0,13,244	0/0:30,3:33:24.72:0,25,415	0/0:17,1:16:21.07:0,21,408	0/0:18,0:18:13.52:0,14,202	0/1:35,0:30:99:179,0,562	0/1:23,0:21:74.86:229,0,75	0/1:10,0:8:14.91:24,0,15
chr10	22273290	.	CTG	C	483.78	PASS	AB=0.947;AC=11;AF=0.220;AN=50;BaseQRankSum=5.589;DP=584;FS=0.544;HRun=0;HaplotypeScore=185.0749;InbreedingCoeff=-0.0988;MQ=35.97;MQ0=36;MQRankSum=-1.602;QD=1.88;ReadPosRankSum=-2.170;VQSLOD=2.0891;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:16:5.95:0,6,79	0/1:10,0:10:9.47:9,0,97	./.	./.	0/0:25,2:22:18.36:0,18,105	0/0:29,0:29:9.46:0,9,392	0/0:22,0:14:24.08:0,24,424	0/1:54,1:52:78.36:78,0,987	0/1:20,0:19:4.52:5,0,35	0/1:33,2:29:99:145,0,542	1/1:20,2:19:9:89,9,0	0/0:17,0:17:33.06:0,33,474	0/0:18,0:17:7.71:0,8,248	0/0:22,0:21:9.71:0,10,248	0/1:18,1:19:23.86:24,0,70	0/1:28,4:31:18.90:19,0,232	0/0:13,0:12:9.64:0,10,154	0/0:9,0:7:13.95:0,14,125	0/0:16,0:16:12.49:0,12,421	0/0:32,1:29:5.52:0,6,143	./.	0/0:14,0:11:12.09:0,12,179	0/0:33,0:33:28.67:0,29,328	0/0:18,0:16:21.53:0,22,314	0/0:18,0:18:13.60:0,14,158	0/1:30,3:28:97.94:98,0,485	0/1:17,4:19:39.61:145,0,40	0/1:10,0:8:10.91:11,0,74
chr10	22273292	.	G	GTC	675.97	PASS	AB=0.957;AC=15;AF=0.300;AN=50;BaseQRankSum=6.681;DP=585;FS=1.140;HRun=0;HaplotypeScore=176.1693;InbreedingCoeff=-0.3057;MQ=36.61;MQ0=36;MQRankSum=-2.038;QD=2.02;ReadPosRankSum=-1.184;VQSLOD=2.5205;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,1:16:4.56:0,5,39	0/0:10,0:10:0.75:0,1,61	./.	./.	0/1:28,0:23:14.02:14,0,35	0/0:28,0:28:23.64:0,24,362	0/0:21,0:14:24.07:0,24,294	0/1:53,0:50:73.16:73,0,604	0/1:18,1:18:9.27:9,0,103	0/1:32,0:27:93.99:94,0,348	1/1:21,1:19:4.41:45,4,0	0/0:17,0:17:32.61:0,33,373	0/1:19,0:18:38.75:39,0,200	0/1:23,0:22:32.92:33,0,188	0/1:14,5:19:21.72:109,0,22	0/1:26,6:31:99:163,0,121	0/1:15,0:14:5.33:5,0,109	0/1:9,0:7:0.33:0,0,126	0/0:15,0:15:0.45:0,0,294	0/0:36,0:32:4.99:0,5,200	./.	0/0:13,0:11:15.50:0,16,165	0/0:30,0:30:27.21:0,27,300	0/0:17,0:15:21.03:0,21,257	0/0:18,0:18:12.98:0,13,153	0/1:33,0:28:65.87:66,0,348	0/1:20,1:19:22.31:138,0,22	0/1:9,1:8:26.97:27,0,35
chr10	22273296	.	CTG	C	772.31	PASS	AB=0.977;AC=17;AF=0.315;AN=54;BaseQRankSum=5.316;DP=619;FS=5.619;HRun=0;HaplotypeScore=172.5101;InbreedingCoeff=-0.1923;MQ=40.31;MQ0=34;MQRankSum=-1.580;QD=1.97;ReadPosRankSum=-2.687;VQSLOD=1.4523;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:20,3:17:10.32:33,0,10	0/1:11,0:11:19.98:20,0,130	0/1:6,0:2:2.17:2,0,3	0/0:11,1:2:3:0,3,26	0/1:26,1:22:15.65:16,0,73	0/0:29,0:29:22.99:0,23,554	0/0:22,0:15:30.08:0,30,490	0/1:51,0:49:15.14:15,0,1446	0/1:20,0:19:27.91:28,0,101	0/1:33,0:28:99:179,0,553	1/1:24,0:21:14.72:141,15,0	0/0:19,0:19:38.98:0,39,610	0/1:20,0:19:4.32:4,0,386	0/0:23,0:22:28.04:0,28,444	0/1:19,2:21:5.26:77,0,5	0/1:29,4:32:27.86:28,0,166	0/0:16,0:15:7.43:0,7,279	0/0:9,0:7:13.28:0,13,181	0/1:19,0:19:4.77:5,0,457	0/1:37,0:33:15.69:16,0,320	./.	0/0:14,0:12:19.29:0,19,274	0/0:30,0:30:29.52:0,30,512	0/0:19,0:17:24.54:0,25,410	0/0:20,0:20:14.39:0,14,224	0/1:34,0:29:99:143,0,433	0/1:24,0:22:9.86:206,0,10	0/1:10,0:8:12.64:13,0,74
chr10	22273298	.	G	GTCTC	1010.27	PASS	AB=0.971;AC=18;AF=0.333;AN=54;BaseQRankSum=5.538;DP=632;FS=10.118;HRun=0;HaplotypeScore=190.8562;InbreedingCoeff=-0.1674;MQ=41.90;MQ0=34;MQRankSum=0.252;QD=2.76;ReadPosRankSum=-2.964;VQSLOD=1.4642;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:18:5.98:48,6,0	0/1:11,0:11:17.95:18,0,83	0/0:7,0:3:1.89:0,2,10	0/0:13,0:3:2.83:0,3,24	0/1:11,14:28:23.77:40,0,24	0/0:29,0:29:24.20:0,24,298	0/0:23,0:16:19.51:0,20,210	0/0:50,0:48:1.10:0,1,1014	0/1:20,0:19:12.21:12,0,91	0/1:32,0:27:99:199,0,331	1/1:24,0:21:15:142,15,0	0/0:18,0:18:35.95:0,36,292	0/1:20,0:19:21.35:21,0,287	0/0:25,0:24:10.13:0,10,204	0/1:20,0:20:1.78:132,0,2	0/1:33,0:32:93.01:93,0,132	0/1:17,0:16:4.23:4,0,172	0/1:9,0:7:17.47:17,0,120	0/1:19,0:19:12.81:13,0,232	0/1:37,0:33:16.52:17,0,224	./.	0/0:14,0:12:11.94:0,12,170	0/0:31,0:31:25.65:0,26,309	0/0:19,0:17:24.81:0,25,264	0/0:22,0:22:11.53:0,12,168	0/1:33,0:28:99:190,0,302	0/1:23,0:21:21.06:218,0,21	0/1:11,0:9:0.47:0,0,52
chr10	22275422	.	A	ACTCTCTCTCTCTCTCTCTCT	3882.54	PASS	AB=1.000;AC=29;AF=0.659;AN=44;BaseQRankSum=0.075;DP=237;FS=51.990;HRun=0;HaplotypeScore=119.5319;InbreedingCoeff=0.6395;MQ=75.97;MQ0=0;MQRankSum=-5.403;QD=32.90;ReadPosRankSum=-2.096;VQSLOD=0.5569;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:41.70:0,42,2752	1/1:4,0:3:3.01:74,3,0	1/1:11,0:10:1.09:75,1,0	0/0:18,0:16:15.41:0,15,394	0/0:11,0:11:30.10:0,30,1205	0/1:4,0:4:0:0,0,0	1/1:3,0:3:3.01:181,3,0	1/1:13,0:10:18.06:680,18,0	./.	1/1:12,0:12:20.10:694,20,0	0/0:3,0:3:0.47:0,0,1	./.	1/1:8,0:8:6.49:108,6,0	1/1:8,0:8:3.01:55,3,0	0/0:10,0:10:24.07:0,24,967	0/0:8,0:8:21.06:0,21,1006	1/1:6,3:9:6.02:556,6,0	1/1:3,0:3:3.01:219,3,0	1/1:11,0:9:9.03:455,9,0	1/1:7,0:7:5.97:74,6,0	./.	./.	0/0:4,0:4:3.01:0,3,41	./.	./.	1/1:5,0:5:12.03:207,12,0	1/1:6,0:6:12.03:260,12,0	1/1:4,0:14:11.97:244,12,0
chr10	22275637	.	A	AG	6496.66	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-5.053;DP=266;FS=6.895;HRun=4;HaplotypeScore=30.1514;InbreedingCoeff=0.9556;MQ=61.48;MQ0=0;MQRankSum=1.576;QD=34.74;ReadPosRankSum=0.285;VQSLOD=4.4605;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:39.09:0,39,432	1/1:0,3:3:9.03:123,9,0	0/0:12,0:7:14.64:0,15,167	0/0:11,0:8:21.06:0,21,235	0/0:20,0:20:60.17:0,60,680	1/1:0,8:8:24.01:305,24,0	1/1:1,6:7:18.06:246,18,0	1/1:2,19:14:35.13:471,35,0	1/1:0,9:9:27.09:369,27,0	1/1:1,8:9:27.08:355,27,0	1/1:1,4:4:11.95:140,12,0	1/1:3,5:8:24.01:285,24,0	1/1:0,7:7:21.07:287,21,0	1/1:0,8:8:24.08:329,24,0	0/0:13,0:13:30.08:0,30,340	0/0:9,0:9:15.04:0,15,170	1/1:1,10:11:30.10:410,30,0	1/1:0,5:5:15.05:205,15,0	1/1:1,5:6:15.01:170,15,0	1/1:0,9:9:26.78:275,27,0	1/1:2,7:9:27.08:352,27,0	1/1:0,7:7:21.07:287,21,0	1/1:1,4:5:15.04:190,15,0	1/1:2,7:9:27.03:331,27,0	1/1:3,8:11:26.95:323,27,0	1/1:1,9:8:24.08:328,24,0	1/1:1,13:14:39.13:533,39,0	1/1:2,4:6:15.01:184,15,0
chr10	22275711	.	AT	A	7109.09	PASS	AB=0.889;AC=53;AF=0.946;AN=56;BaseQRankSum=-0.010;DP=418;FS=1.626;HRun=9;HaplotypeScore=87.3148;InbreedingCoeff=0.4996;MQ=63.06;MQ0=0;MQRankSum=-1.996;QD=17.17;ReadPosRankSum=2.450;VQSLOD=5.1822;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,0:13:1.88:38,2,0	1/1:0,3:3:9:82,9,0	0/1:7,1:8:11.48:11,0,107	0/0:4,0:4:9.03:0,9,104	1/1:3,0:30:46.67:137,47,0	1/1:0,11:11:33.02:302,33,0	1/1:0,6:6:15.01:137,15,0	1/1:2,23:23:63.02:572,63,0	1/1:1,14:15:42.02:384,42,0	1/1:3,21:24:63.02:577,63,0	1/1:3,14:17:39.02:357,39,0	1/1:1,13:14:36.01:329,36,0	1/1:0,12:12:36.02:329,36,0	1/1:2,16:18:48.01:435,48,0	1/1:3,0:19:26.48:78,26,0	1/1:1,0:13:16.29:48,16,0	1/1:3,6:9:18:165,18,0	1/1:2,12:14:36.02:329,36,0	1/1:0,14:14:42.02:384,42,0	1/1:1,21:22:60.02:549,60,0	1/1:3,6:9:18.01:165,18,0	1/1:1,4:5:15.01:137,15,0	1/1:2,14:16:45.01:406,45,0	1/1:2,6:8:21.01:192,21,0	1/1:1,22:23:69.04:630,69,0	1/1:2,0:24:43.25:127,43,0	1/1:6,0:29:48.40:142,48,0	1/1:1,0:13:22.41:66,22,0
chr10	22276658	.	ATGTG	A	13012.96	PASS	AB=1.000;AC=51;AF=0.911;AN=56;BaseQRankSum=5.508;DP=421;FS=1.595;HRun=0;HaplotypeScore=82.7447;InbreedingCoeff=0.5657;MQ=65.47;MQ0=4;MQRankSum=-0.757;QD=33.89;ReadPosRankSum=3.456;VQSLOD=5.0351;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:63.19:0,63,1413	1/1:0,8:8:18.06:318,18,0	0/0:14,0:8:0.95:0,1,203	0/1:13,0:10:20.50:21,0,181	1/1:2,36:38:63.22:1112,63,0	1/1:1,9:10:18.06:318,18,0	1/1:1,7:8:9.03:159,9,0	1/1:8,21:29:63.22:1087,63,0	1/1:0,9:9:27.09:477,27,0	1/1:2,20:22:60.20:1036,60,0	1/1:1,26:27:60.21:1060,60,0	1/1:2,10:12:21.07:371,21,0	1/1:2,14:16:27.09:477,27,0	1/1:1,13:14:24.08:424,24,0	1/1:2,11:13:30.10:530,30,0	1/1:0,8:8:18.06:318,18,0	1/1:4,18:22:33.11:583,33,0	1/1:1,7:8:18.06:318,18,0	1/1:3,13:16:39.13:659,39,0	1/1:2,17:19:33.11:583,33,0	1/1:0,12:12:15.05:265,15,0	1/1:0,2:2:6.02:106,6,0	1/1:1,4:5:12.04:212,12,0	1/1:1,9:10:24.08:424,24,0	1/1:4,12:16:24.08:424,24,0	1/1:3,16:19:51.17:886,51,0	1/1:2,23:25:39.13:689,39,0	1/1:0,3:3:9.03:159,9,0
chr10	22277254	.	TGC	T	3130.53	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=3.279;DP=469;FS=2.816;HRun=0;HaplotypeScore=147.5492;InbreedingCoeff=0.9466;MQ=54.20;MQ0=14;MQRankSum=-3.460;QD=14.56;ReadPosRankSum=3.449;VQSLOD=3.5260;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:24:29.94:0,30,190	0/0:6,0:6:10.48:0,10,68	0/0:45,0:20:46.28:0,46,369	0/0:44,0:22:44.39:0,44,489	0/0:25,0:25:25.04:0,25,170	1/1:10,5:14:15:136,15,0	1/1:9,0:8:17.97:147,18,0	1/1:19,0:16:44.94:390,45,0	0/0:6,0:6:8.77:0,9,52	1/1:2,16:17:44.55:367,45,0	1/1:0,23:23:14.92:133,15,0	1/1:4,5:9:18.02:169,18,0	1/1:7,4:11:26.96:236,27,0	1/1:9,5:14:15.89:140,16,0	0/0:14,0:14:29.69:0,30,211	0/0:16,0:16:28.91:0,29,130	0/0:17,0:17:19.25:0,19,120	0/0:8,0:8:9.22:0,9,52	0/0:13,0:13:30.62:0,31,214	0/0:20,0:20:14.86:0,15,105	0/0:15,0:15:11.69:0,12,98	1/1:0,11:11:9.02:89,9,0	1/1:7,3:10:17.99:157,18,0	1/1:13,1:13:11.86:88,12,0	1/1:6,10:16:30.02:276,30,0	1/1:16,3:19:53.86:456,54,0	1/1:10,9:19:44.90:395,45,0	1/1:5,3:8:18.82:177,19,0
chr10	22277257	.	GCACACA	G	2402.83	PASS	AB=0.905;AC=38;AF=0.704;AN=54;BaseQRankSum=6.023;DP=474;FS=9.842;HRun=0;HaplotypeScore=172.9233;InbreedingCoeff=0.3736;MQ=51.22;MQ0=17;MQRankSum=-0.469;QD=7.60;ReadPosRankSum=1.949;VQSLOD=1.9110;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:13,1:24:8.95:93,9,0	1/1:7,0:6:3.01:42,3,0	0/0:42,0:17:2.96:0,3,19	0/0:44,0:22:13.55:0,14,108	0/1:10,15:26:6.04:56,0,6	1/1:12,0:11:9.03:120,9,0	0/0:8,0:7:0:0,0,0	0/0:21,0:18:3.90:0,4,63	1/1:6,0:6:6.02:84,6,0	1/1:17,0:16:20.98:252,21,0	1/1:23,0:23:15.03:194,15,0	1/1:9,0:9:15.05:204,15,0	1/1:12,0:11:11.99:166,12,0	1/1:13,0:13:11.63:135,12,0	0/0:9,0:14:2.92:0,3,29	1/1:4,1:16:7.60:30,8,0	1/1:19,0:19:5.97:61,6,0	1/1:13,0:13:2.91:42,3,0	1/1:13,0:13:6.02:84,6,0	0/1:24,0:24:0:0,0,0	./.	1/1:11,0:11:9.03:125,9,0	1/1:10,0:10:5.96:83,6,0	0/0:14,0:13:0:0,0,0	1/1:16,0:16:14.99:207,15,0	0/1:18,0:18:89.67:99,0,90	1/1:18,0:18:24.07:318,24,0	0/1:8,0:8:3.70:146,0,4
chr10	22277275	.	ACACACACACACACACACACC	A	6298.58	PASS	AB=0.992;AC=28;AF=0.519;AN=54;BaseQRankSum=8.334;DP=539;FS=7.140;HRun=0;HaplotypeScore=244.3085;InbreedingCoeff=0.0006;MQ=42.71;MQ0=43;MQRankSum=-5.334;QD=19.14;ReadPosRankSum=7.137;VQSLOD=1.9159;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:27:51.45:0,51,1147	1/1:4,7:9:3.01:167,3,0	0/0:47,0:9:12.90:0,13,399	0/0:54,0:10:21.07:0,21,832	0/0:23,0:22:17.53:0,18,435	0/1:18,0:17:37.56:513,0,38	0/1:13,0:12:11.71:12,0,28	0/1:20,0:17:42.08:42,0,238	1/1:1,5:6:6.02:333,6,0	0/1:19,0:17:61.87:693,0,62	0/1:24,0:24:63.64:542,0,64	1/1:11,0:11:18.06:586,18,0	0/1:9,1:9:37.42:491,0,37	0/1:15,0:15:7.93:492,0,8	0/0:14,0:14:36.08:0,36,1334	0/0:18,0:18:39.61:0,40,2087	1/1:3,19:22:6.02:298,6,0	1/1:2,14:16:2.39:166,2,0	1/1:5,10:11:32.73:503,33,0	1/1:3,22:25:3.01:102,3,0	./.	1/1:11,0:11:12.04:355,12,0	0/1:23,0:20:39.85:196,0,40	0/0:15,0:14:8.34:0,8,59	0/1:20,0:20:99:530,0,115	0/1:21,0:21:18.06:18,0,710	0/1:20,0:19:99:218,0,159	0/1:8,0:8:42.26:42,0,97
chr10	22277277	.	ACACACACACACACACACC	A	8547.80	PASS	AB=1.000;AC=35;AF=0.648;AN=54;BaseQRankSum=3.970;DP=542;FS=15.038;HRun=0;HaplotypeScore=224.6754;InbreedingCoeff=0.3278;MQ=42.62;MQ0=42;MQRankSum=-2.847;QD=24.99;ReadPosRankSum=3.424;VQSLOD=2.5272;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:28:54.17:0,54,887	1/1:10,0:8:3.01:131,3,0	0/0:47,0:7:14.78:0,15,384	0/0:55,0:10:21.04:0,21,691	0/0:23,0:22:17.52:0,18,379	1/1:16,3:18:27.40:640,27,0	1/1:13,0:12:13.26:150,13,0	0/1:19,0:16:48.85:102,0,49	1/1:6,0:6:6.02:263,6,0	1/1:20,0:18:38.99:1194,39,0	1/1:22,2:24:22.17:796,22,0	1/1:12,0:11:21.06:808,21,0	0/1:10,0:9:10.73:597,0,11	1/1:13,2:15:17.96:586,18,0	0/0:16,0:16:42.05:0,42,1152	0/0:18,0:18:39.60:0,40,1764	1/1:22,0:22:6.02:228,6,0	1/1:15,0:15:2.39:131,2,0	0/1:15,0:11:24.72:344,0,25	1/1:25,0:25:3.01:67,3,0	./.	1/1:10,0:10:12.04:542,12,0	1/1:23,0:20:8.94:321,9,0	0/1:14,0:13:8.48:41,0,8	1/1:21,0:21:25.65:896,26,0	0/1:21,0:21:99:125,0,522	0/1:20,0:19:62.44:455,0,62	0/1:8,0:8:89.92:132,0,90
chr10	22277279	.	ACACACACACACACACC	A	8013.79	PASS	AB=0.987;AC=37;AF=0.685;AN=54;BaseQRankSum=3.916;DP=538;FS=17.528;HRun=0;HaplotypeScore=214.9338;InbreedingCoeff=0.4651;MQ=41.13;MQ0=41;MQRankSum=-3.686;QD=23.43;ReadPosRankSum=1.951;VQSLOD=2.4547;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:28:48.15:0,48,632	1/1:10,0:8:3.01:117,3,0	0/0:46,0:7:14.83:0,15,348	0/0:52,0:8:17.20:0,17,597	0/0:22,0:21:14.48:0,14,275	1/1:16,2:18:29.67:595,30,0	1/1:13,0:12:11.67:89,12,0	0/1:19,0:16:38.45:122,0,38	1/1:6,0:6:6.02:235,6,0	1/1:14,6:18:35.56:1037,36,0	1/1:14,10:24:27.27:709,27,0	1/1:7,5:11:20.64:654,21,0	1/1:7,3:9:17.86:531,18,0	1/1:14,3:17:15.92:488,16,0	0/0:16,0:16:42.05:0,42,1009	0/0:18,0:18:39.56:0,40,1437	1/1:22,0:22:6.02:200,6,0	1/1:15,0:15:2.57:117,3,0	0/1:14,0:11:17:321,0,17	1/1:23,0:23:3.01:53,3,0	./.	1/1:6,4:10:12.04:437,12,0	1/1:20,3:20:6.49:250,6,0	0/1:13,1:13:4.25:4,0,11	1/1:11,10:21:29.08:769,29,0	0/1:21,0:21:99:250,0,171	1/1:21,0:20:13.49:774,13,0	0/1:9,0:9:25.87:258,0,26
chr10	22277283	.	ACACACACACACC	A	7348.40	PASS	AB=1.000;AC=39;AF=0.722;AN=54;BaseQRankSum=2.069;DP=530;FS=6.742;HRun=0;HaplotypeScore=195.0376;InbreedingCoeff=0.6730;MQ=41.41;MQ0=40;MQRankSum=-1.382;QD=23.18;ReadPosRankSum=1.950;VQSLOD=3.0076;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:28:30.07:0,30,264	1/1:9,0:7:3.01:90,3,0	0/0:46,0:9:23.52:0,24,302	0/0:53,0:10:11.92:0,12,314	0/0:23,0:22:9.84:0,10,137	1/1:18,0:18:32.98:487,33,0	1/1:15,0:15:16.76:130,17,0	0/1:16,0:14:43.94:194,0,44	1/1:6,0:6:6.02:179,6,0	1/1:18,0:16:39.02:792,39,0	1/1:24,0:24:32.97:609,33,0	1/1:13,0:12:27.05:596,27,0	1/1:10,0:9:20.93:444,21,0	1/1:14,0:14:15.04:372,15,0	0/0:16,0:16:38.91:0,39,606	0/0:20,0:20:42.58:0,43,913	1/1:21,0:21:6.02:144,6,0	1/1:15,0:15:2.32:89,2,0	1/1:14,0:11:20.94:292,21,0	1/1:22,0:22:3.01:38,3,0	./.	1/1:9,0:9:12.04:320,12,0	1/1:24,0:21:5.97:191,6,0	0/0:13,0:12:2.94:0,3,18	1/1:20,0:20:33:637,33,0	1/1:16,3:19:0.37:425,0,0	1/1:14,7:19:39.04:881,39,0	1/1:6,3:9:13.72:440,14,0
chr10	22277293	.	ACC	A	3880.35	PASS	AB=1.000;AC=42;AF=0.778;AN=54;BaseQRankSum=0.765;DP=502;FS=0.610;HRun=3;HaplotypeScore=150.6671;InbreedingCoeff=0.6277;MQ=46.51;MQ0=33;MQRankSum=-1.890;QD=10.38;ReadPosRankSum=1.796;VQSLOD=0.3636;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:35.84:0,36,288	1/1:9,0:7:2.97:20,3,0	0/0:44,0:15:4.40:0,4,209	0/1:48,0:13:3.50:3,0,67	0/1:23,0:22:5.42:5,0,105	1/1:16,0:16:38.91:317,39,0	1/1:12,0:12:18.46:152,18,0	1/1:16,0:15:41.78:329,42,0	1/1:6,0:6:5.92:39,6,0	1/1:18,0:16:46.54:361,47,0	1/1:21,0:21:38.68:308,39,0	1/1:14,0:13:29.96:251,30,0	1/1:11,0:10:26.89:214,27,0	1/1:12,0:12:20.35:157,20,0	0/0:15,0:15:28.26:0,28,203	0/0:18,1:19:14.20:0,14,193	1/1:21,0:21:2.97:20,3,0	1/1:15,0:15:5.77:33,6,0	1/1:14,0:11:20.86:152,21,0	1/1:23,0:23:2.94:18,3,0	./.	1/1:10,0:10:26.89:213,27,0	1/1:8,15:20:5.89:51,6,0	0/0:8,0:7:2.74:0,3,12	1/1:23,0:23:44.87:369,45,0	1/1:16,0:16:47.20:374,47,0	1/1:16,1:15:41.73:336,42,0	1/1:6,0:6:17.98:157,18,0
chr10	22277397	.	ATC	A	11588.76	PASS	AB=0.889;AC=45;AF=0.804;AN=56;BaseQRankSum=12.535;DP=415;FS=16.756;HRun=0;HaplotypeScore=181.3577;InbreedingCoeff=0.8632;MQ=67.34;MQ0=0;MQRankSum=-11.860;QD=36.44;ReadPosRankSum=3.002;VQSLOD=4.9159;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:51.17:0,51,1003	1/1:0,10:10:30.10:412,30,0	0/0:9,0:10:16.35:0,16,238	0/1:14,0:16:6.52:7,0,245	0/0:36,0:36:99:0,105,2095	1/1:3,14:17:51.03:665,51,0	1/1:0,4:4:12.04:159,12,0	1/1:0,9:14:42.13:588,42,0	1/1:1,6:7:21.07:283,21,0	1/1:3,20:23:69.11:972,69,0	1/1:0,16:18:53.97:665,54,0	1/1:1,11:12:36.11:473,36,0	1/1:3,18:21:60.16:779,60,0	1/1:1,16:17:48.15:631,48,0	0/0:19,0:19:54.19:0,54,1078	0/0:14,0:14:42.14:0,42,824	1/1:1,5:6:15.05:206,15,0	1/1:1,3:4:12.02:154,12,0	1/1:0,12:12:36.12:535,36,0	1/1:4,23:27:79.64:974,80,0	1/1:1,5:6:10.87:161,11,0	1/1:0,12:15:36.12:481,36,0	1/1:0,18:19:52.88:717,53,0	1/1:0,4:8:11.15:159,11,0	1/1:0,18:18:54.18:730,54,0	1/1:2,20:22:66.22:931,66,0	1/1:0,19:19:57.19:783,57,0	1/1:0,3:3:9.03:126,9,0
chr10	22277401	.	TTTTAAGG	T	20104.81	PASS	AB=1.000;AC=45;AF=0.804;AN=56;BaseQRankSum=13.071;DP=394;FS=20.016;HRun=0;HaplotypeScore=184.9809;InbreedingCoeff=0.8830;MQ=67.65;MQ0=0;MQRankSum=-12.363;QD=69.09;ReadPosRankSum=3.615;VQSLOD=3.3516;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:51.13:0,51,1993	1/1:0,10:10:30.10:760,30,0	0/1:10,0:10:2.74:3,0,471	0/0:14,0:15:16.69:0,17,347	0/0:36,0:36:99:0,108,4339	1/1:1,14:15:45.14:1075,45,0	1/1:0,4:4:12.04:298,12,0	1/1:2,9:11:33.10:790,33,0	1/1:1,6:7:20.10:461,20,0	1/1:1,20:21:63.20:1607,63,0	1/1:2,16:18:50.61:1198,51,0	1/1:0,11:11:33.11:831,33,0	1/1:2,18:20:57.20:1402,57,0	1/1:0,16:16:45.15:1127,45,0	0/0:19,0:19:54.18:0,54,2120	0/0:15,0:15:45.15:0,45,1885	1/1:0,5:5:15.05:380,15,0	1/1:0,3:3:9.03:235,9,0	1/1:0,9:9:27.09:718,27,0	1/1:2,23:25:75.21:1702,75,0	1/1:0,5:5:13.29:305,13,0	1/1:2,12:14:36.12:899,36,0	1/1:1,18:19:56.41:1353,56,0	1/1:2,4:6:13.60:304,14,0	1/1:0,18:18:54.19:1356,54,0	1/1:2,20:22:66.22:1624,66,0	1/1:0,19:19:57.20:1445,57,0	1/1:0,3:3:9.03:231,9,0
chr10	22278029	.	G	GA	3478.59	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-2.374;DP=518;FS=0.861;HRun=7;HaplotypeScore=68.5837;InbreedingCoeff=0.9900;MQ=76.47;MQ0=0;MQRankSum=-0.807;QD=30.51;ReadPosRankSum=0.713;VQSLOD=4.0316;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:48.05:0,48,455	1/1:0,6:6:15.05:181,15,0	0/0:13,0:13:21.09:0,21,262	0/0:11,0:11:17.18:0,17,182	0/0:28,0:28:78.09:0,78,740	0/0:30,0:29:81.11:0,81,776	0/0:19,0:19:57.03:0,57,536	0/0:17,0:17:51.08:0,51,492	1/1:3,12:15:36.11:435,36,0	0/0:16,0:16:42.04:0,42,398	0/0:19,0:19:51.02:0,51,481	0/0:12,0:12:30:0,30,279	0/0:19,0:19:42.02:0,42,389	0/0:20,0:20:51.07:0,51,492	0/0:25,0:25:69.10:0,69,661	0/0:28,0:28:75.12:0,75,724	1/1:2,19:21:51.16:616,51,0	1/1:0,6:6:14.99:166,15,0	1/1:2,19:21:57.15:668,57,0	1/1:3,25:28:75.23:906,75,0	1/1:1,16:17:42.13:507,42,0	0/0:14,0:14:42.07:0,42,405	0/0:21,0:21:51.06:0,51,486	0/0:14,0:14:39.06:0,39,376	0/0:25,0:25:69.11:0,69,666	0/0:19,0:19:51.07:0,51,489	0/0:30,0:30:84.09:0,84,797	0/0:6,0:6:18.03:0,18,174
chr10	22278136	.	A	AAAAAAC	17254.01	PASS	AB=1.000;AC=43;AF=0.768;AN=56;BaseQRankSum=4.543;DP=556;FS=15.077;HRun=0;HaplotypeScore=135.0219;InbreedingCoeff=0.8131;MQ=59.43;MQ0=0;MQRankSum=-10.978;QD=40.22;ReadPosRankSum=-0.996;VQSLOD=3.8127;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:36.10:0,36,661	1/1:10,0:10:18.06:474,18,0	0/0:22,0:15:11.87:0,12,248	0/0:15,0:13:14.34:0,14,259	0/0:27,0:27:66.17:0,66,1287	1/1:25,0:25:45.15:1186,45,0	1/1:16,0:16:21.06:536,21,0	1/1:12,11:23:33.03:840,33,0	0/1:19,0:19:43.96:377,0,44	1/1:7,26:33:78.25:2387,78,0	1/1:11,21:32:57.19:1842,57,0	1/1:11,0:11:30.10:791,30,0	1/1:28,0:28:24.06:633,24,0	1/1:18,0:18:24.08:629,24,0	0/0:22,0:22:51.17:0,51,1013	0/0:20,0:20:36.12:0,36,679	1/1:7,0:7:6.80:233,7,0	1/1:6,0:6:6.02:145,6,0	1/1:21,0:21:30.08:721,30,0	1/1:34,0:33:60.12:1239,60,0	1/1:6,0:6:3.01:79,3,0	1/1:20,0:20:27.08:711,27,0	1/1:23,0:23:36.59:918,37,0	1/1:13,0:13:15.05:396,15,0	1/1:23,0:23:42.13:1108,42,0	1/1:27,0:27:54.16:1206,54,0	1/1:27,0:27:21.06:551,21,0	1/1:6,0:6:11.87:251,12,0
chr10	22278154	.	C	CAAAAACA	26303.85	PASS	AB=0.909;AC=42;AF=0.750;AN=56;BaseQRankSum=-2.813;DP=564;FS=14.038;HRun=0;HaplotypeScore=119.3933;InbreedingCoeff=0.5856;MQ=63.30;MQ0=1;MQRankSum=-11.442;QD=57.43;ReadPosRankSum=3.742;VQSLOD=4.0587;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:57.16:0,57,1118	1/1:2,9:11:27.09:951,27,0	0/0:21,0:14:29.52:0,30,458	0/1:20,0:17:14.10:14,0,329	0/0:27,0:27:78.19:0,78,1706	1/1:6,17:24:48.16:1815,48,0	1/1:7,10:17:33.11:1222,33,0	0/1:28,0:28:99:604,0,180	0/1:6,8:14:45.11:984,0,45	1/1:34,0:34:38.35:1934,38,0	0/1:31,0:31:99:1471,0,114	1/1:1,15:16:30.10:1152,30,0	1/1:10,13:24:39.13:1455,39,0	1/1:5,10:20:30.10:1118,30,0	0/0:21,0:21:57.18:0,57,1290	0/0:18,0:18:46.01:0,46,890	1/1:3,4:8:9.03:346,9,0	1/1:2,2:4:6.02:218,6,0	1/1:6,15:25:50.93:1448,51,0	1/1:11,9:28:75.21:2068,75,0	1/1:2,1:5:8.96:169,9,0	1/1:8,12:21:45.15:1438,45,0	1/1:3,17:21:45.62:1485,46,0	1/1:6,7:13:21.07:778,21,0	1/1:5,18:24:51.17:1887,51,0	1/1:7,27:35:55.28:2158,55,0	1/1:6,17:27:33.11:1196,33,0	1/1:2,3:7:12.04:389,12,0
chr10	22279177	.	A	AT	12129.59	PASS	AB=0.706;AC=44;AF=0.786;AN=56;BaseQRankSum=-10.372;DP=547;FS=3.242;HRun=8;HaplotypeScore=48.3105;InbreedingCoeff=0.8113;MQ=70.62;MQ0=0;MQRankSum=-0.399;QD=26.95;ReadPosRankSum=2.318;VQSLOD=5.5162;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:42.01:0,42,380	1/1:1,8:9:21.06:242,21,0	0/0:17,0:17:38.71:0,39,342	0/1:5,1:5:9.63:10,0,38	0/0:33,0:33:77.95:0,78,699	1/1:2,28:30:78.23:900,78,0	1/1:0,16:16:45.13:519,45,0	1/1:5,31:37:68.63:1006,69,0	0/1:2,8:10:6.40:187,0,6	1/1:2,20:22:60.18:692,60,0	1/1:6,14:20:14.62:408,15,0	1/1:2,20:22:51.15:589,51,0	1/1:3,18:21:20.68:491,21,0	1/1:3,9:12:24.07:277,24,0	0/0:12,0:12:33:0,33,297	0/0:17,0:17:51:0,51,458	1/1:0,33:33:93.28:1073,93,0	1/1:2,9:11:24.07:277,24,0	1/1:5,9:14:30.07:331,30,0	1/1:4,27:31:81.20:920,81,0	1/1:1,11:12:30.09:346,30,0	1/1:0,21:21:60.18:692,60,0	1/1:5,16:21:45.13:519,45,0	1/1:2,11:13:33.10:381,33,0	1/1:0,17:17:45.13:519,45,0	1/1:5,22:28:44.58:748,45,0	1/1:7,22:27:51.15:586,51,0	1/1:1,14:15:36.11:415,36,0
chr10	22279829	.	CT	C	5474.54	PASS	AB=0.556;AC=37;AF=0.661;AN=56;BaseQRankSum=-4.140;DP=568;FS=0.000;HRun=12;HaplotypeScore=88.7187;InbreedingCoeff=0.9362;MQ=63.91;MQ0=2;MQRankSum=-0.531;QD=12.79;ReadPosRankSum=0.148;VQSLOD=4.7805;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:6,23:30:2.08:342,0,2	0/0:6,0:10:15.22:0,15,78	0/0:16,0:8:15.01:0,15,145	0/0:6,0:5:15.02:0,15,147	1/1:6,18:24:47.67:365,48,0	1/1:2,20:22:41.83:325,42,0	1/1:5,9:14:23.86:186,24,0	1/1:7,0:36:34.73:137,35,0	0/0:2,0:15:24.32:0,24,147	1/1:4,1:30:51.96:172,52,0	1/1:2,0:22:36.65:106,37,0	1/1:4,26:30:56.74:441,57,0	1/1:5,22:28:55.82:424,56,0	1/1:4,13:17:35.83:279,36,0	1/1:1,16:17:38.82:298,39,0	1/1:4,13:18:25.83:192,26,0	0/0:2,0:20:45.78:0,46,261	0/0:7,0:22:43.07:0,43,253	0/0:4,0:15:34.25:0,34,188	0/0:5,0:23:54.73:0,55,328	0/0:3,0:12:19.89:0,20,100	1/1:3,19:22:47.76:371,48,0	1/1:4,16:21:27.40:287,27,0	1/1:1,5:6:11.95:93,12,0	1/1:3,19:23:43.84:331,44,0	1/1:3,24:28:72.55:540,73,0	1/1:4,21:25:42.29:326,42,0	1/1:1,13:15:34.91:261,35,0
chr10	22280400	.	G	GAA	2046.06	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-2.298;DP=570;FS=9.015;HRun=10;HaplotypeScore=80.3590;InbreedingCoeff=0.9331;MQ=62.46;MQ0=19;MQRankSum=1.675;QD=18.43;ReadPosRankSum=-0.665;VQSLOD=1.8550;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,0:42:6.63:154,7,0	0/0:6,0:6:12.02:0,12,120	0/0:25,0:15:24.48:0,24,290	0/0:20,0:8:20.96:0,21,192	1/1:6,21:28:42.48:703,42,0	0/0:16,0:17:44.80:0,45,439	0/0:23,0:24:41.55:0,42,532	0/0:22,0:16:42.08:0,42,427	0/0:19,0:19:51.07:0,51,510	0/0:13,0:13:27.04:0,27,274	0/0:13,0:13:32.81:0,33,316	0/0:31,0:31:68.96:0,69,695	0/0:16,0:16:42.07:0,42,421	0/0:23,0:22:48.02:0,48,468	1/1:1,16:18:45.15:672,45,0	1/1:4,19:23:45.05:671,45,0	0/0:37,0:38:92.59:0,93,908	0/0:13,0:13:36.08:0,36,366	0/0:14,0:13:35.82:0,36,347	0/0:15,0:16:38.79:0,39,370	0/0:23,0:22:53.84:0,54,524	0/0:18,0:18:39.01:0,39,382	0/0:18,0:19:47.83:0,48,470	0/0:17,0:18:41.82:0,42,408	0/0:12,0:12:27.03:0,27,268	0/0:25,0:25:45.13:0,45,161	0/0:19,0:19:29.61:0,30,108	0/0:5,0:3:5.67:0,6,17
chr10	22280401	.	A	AG	1578.56	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=-3.671;DP=564;FS=5.284;HRun=2;HaplotypeScore=68.2317;InbreedingCoeff=0.8106;MQ=62.72;MQ0=19;MQRankSum=0.269;QD=17.16;ReadPosRankSum=2.529;VQSLOD=3.7458;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:42,0:42:88.62:89,0,100	0/0:5,0:5:15.03:0,15,191	0/0:28,0:15:38.88:0,39,389	0/0:22,0:8:21.69:0,22,195	0/0:27,0:27:60.37:0,60,347	0/0:17,0:17:51.05:0,51,649	0/0:24,0:23:51.40:0,51,794	0/0:22,0:16:45.12:0,45,605	0/0:18,0:18:54.07:0,54,715	0/0:12,0:12:36:0,36,437	0/0:14,0:13:36.05:0,36,463	0/0:29,0:29:78.09:0,78,1027	0/0:15,0:15:45.12:0,45,604	0/0:22,0:22:57.16:0,57,727	0/0:18,0:18:42.48:0,42,227	0/0:24,0:24:48.71:0,49,278	0/0:39,0:38:99:0,114,1389	0/0:13,0:13:39.11:0,39,521	0/0:15,0:13:36.05:0,36,478	0/0:16,0:16:45.04:0,45,556	0/0:23,0:22:66.11:0,66,825	0/0:19,0:19:53.95:0,54,625	0/0:20,0:20:57.06:0,57,717	0/0:17,0:17:48.07:0,48,612	0/0:13,0:13:36.09:0,36,444	1/1:1,24:25:44.35:845,44,0	1/1:1,19:20:44.50:663,45,0	1/1:2,3:3:9.03:126,9,0
chr10	22280875	.	GAA	G	5950.30	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=14.190;DP=665;FS=1.879;HRun=10;HaplotypeScore=85.9970;InbreedingCoeff=0.9969;MQ=76.41;MQ0=0;MQRankSum=-0.490;QD=26.92;ReadPosRankSum=1.323;VQSLOD=5.1298;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:2,0:23:47.41:0,47,163	0/0:13,0:13:36.12:0,36,572	0/0:13,0:14:29.07:0,29,369	0/0:14,0:14:24.07:0,24,337	0/0:33,0:34:93.32:0,93,1475	1/1:1,21:22:57.14:635,57,0	1/1:2,19:21:48.12:535,48,0	0/0:37,0:38:95.78:0,96,1419	0/0:18,0:18:51.14:0,51,743	0/0:40,0:40:90.30:0,90,1400	0/0:36,0:36:93.31:0,93,1455	1/1:2,24:26:63.15:701,63,0	1/1:0,20:20:57.15:635,57,0	1/1:3,22:25:57.11:635,57,0	0/0:19,0:19:45.15:0,45,694	0/0:16,0:17:50.66:0,51,770	0/0:23,0:24:72.24:0,72,1124	0/0:15,0:15:39.12:0,39,594	0/0:23,0:23:57.19:0,57,881	0/0:29,0:31:92.80:0,93,1418	0/0:19,0:19:54.16:0,54,831	1/1:5,23:28:66.16:736,66,0	1/1:4,38:42:98.93:1103,99,0	1/1:2,9:11:27.06:301,27,0	1/1:2,24:26:60.16:669,60,0	0/0:37,0:37:90.29:0,90,1406	0/0:23,0:24:60.20:0,60,933	0/0:5,0:5:15.04:0,15,216
chr10	22281121	.	G	GT	6261.99	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-15.473;DP=686;FS=2.823;HRun=6;HaplotypeScore=59.5836;InbreedingCoeff=0.9838;MQ=72.74;MQ0=0;MQRankSum=2.224;QD=31.00;ReadPosRankSum=0.257;VQSLOD=5.3931;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,18:23:48.15:604,48,0	0/0:9,0:9:24.04:0,24,238	0/0:9,0:9:20.92:0,21,178	0/0:13,0:12:7.54:0,8,184	1/1:2,37:39:99:1221,102,0	0/0:33,0:33:96.22:0,96,979	0/0:22,0:22:60.11:0,60,599	1/1:6,25:31:75.21:917,75,0	0/0:18,0:18:48.06:0,48,469	1/1:6,34:40:99:1253,108,0	1/1:2,27:29:81.22:1001,81,0	0/0:25,0:25:69.13:0,69,692	0/0:22,0:22:54.10:0,54,540	0/0:30,0:30:90.17:0,90,902	1/1:0,14:14:39.12:491,39,0	1/1:3,23:25:63.17:776,63,0	0/0:26,0:26:72.07:0,72,709	0/0:15,0:15:36.08:0,36,367	0/0:17,0:17:39.08:0,39,394	0/0:40,0:40:99:0,102,1021	0/0:11,0:11:30.02:0,30,286	0/0:28,0:28:78.15:0,78,782	0/0:36,0:36:99:0,105,1066	0/0:26,0:26:78.15:0,78,782	0/0:31,0:31:81.15:0,81,811	0/0:25,1:26:37.42:0,37,691	0/0:38,0:38:99:0,105,1047	0/0:9,0:9:21.05:0,21,213
chr10	22281817	.	T	TC	3656.47	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-13.624;DP=647;FS=0.857;HRun=3;HaplotypeScore=58.6975;InbreedingCoeff=0.9987;MQ=75.21;MQ0=0;MQRankSum=-2.551;QD=33.55;ReadPosRankSum=3.998;VQSLOD=3.9856;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,29:30:72.24:983,72,0	0/0:15,0:15:42.12:0,42,491	0/0:25,0:25:53.12:0,53,599	0/0:24,0:24:62.24:0,62,723	1/1:2,24:26:65.89:871,66,0	0/0:32,0:32:93.21:0,93,1046	0/0:18,0:18:51.12:0,51,578	0/0:26,0:26:72.20:0,72,838	0/0:23,0:23:69.17:0,69,790	0/0:36,0:36:99:0,105,1202	0/0:27,0:26:78.22:0,78,915	0/0:13,0:13:36.11:0,36,431	0/0:16,0:16:48.13:0,48,555	0/0:17,0:17:48.12:0,48,553	1/1:1,26:27:72.24:984,72,0	1/1:0,26:26:60.20:819,60,0	0/0:14,0:14:35.41:0,35,364	0/0:8,0:8:21.02:0,21,234	0/0:25,0:25:72.19:0,72,822	0/0:36,0:36:99:0,99,1131	0/0:20,0:20:54.09:0,54,605	0/0:16,0:16:48.14:0,48,566	0/0:24,0:24:72.21:0,72,849	0/0:19,0:19:54.16:0,54,645	0/0:30,0:30:81.23:0,81,951	0/0:29,0:29:84.23:0,84,971	0/0:34,0:34:99:0,102,1197	0/0:11,0:11:33.10:0,33,394
chr10	22282988	.	G	GA	6503.37	PASS	AB=0.593;AC=30;AF=0.536;AN=56;BaseQRankSum=-17.127;DP=564;FS=4.521;HRun=10;HaplotypeScore=79.5768;InbreedingCoeff=0.8572;MQ=72.19;MQ0=0;MQRankSum=-1.729;QD=23.56;ReadPosRankSum=0.699;VQSLOD=5.5139;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:47.94:0,48,394	1/1:0,7:7:18.05:192,18,0	0/0:13,0:11:5.08:0,5,132	0/0:9,0:9:11.65:0,12,85	0/0:1,0:33:61.10:0,61,177	1/1:7,19:26:4.86:462,5,0	1/1:1,10:14:38.60:363,39,0	0/0:4,0:38:66.99:0,67,193	1/1:2,15:17:42.11:448,42,0	0/0:2,0:35:65.84:0,66,189	0/0:3,0:26:44.81:0,45,130	0/1:6,10:16:0.59:200,0,1	1/1:2,14:16:36.09:384,36,0	1/1:1,13:14:36.09:383,36,0	0/0:2,0:21:38.70:0,39,112	0/0:3,0:20:28.51:0,29,82	1/1:1,9:10:24.06:256,24,0	0/1:2,5:8:6.76:124,0,7	1/1:7,19:26:35.45:557,35,0	1/1:4,23:27:47.08:671,47,0	1/1:0,6:6:15.04:160,15,0	1/1:1,18:19:53.96:539,54,0	1/1:3,29:34:86.92:892,87,0	1/1:0,9:9:21.05:224,21,0	1/1:4,23:27:41.52:647,42,0	0/0:5,0:37:65.08:0,65,188	0/0:4,0:28:44.77:0,45,129	0/0:1,0:10:18.31:0,18,53
chr10	22283224	.	C	CA	4079.50	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-12.516;DP=651;FS=4.145;HRun=4;HaplotypeScore=63.8820;InbreedingCoeff=0.9964;MQ=93.31;MQ0=0;MQRankSum=-6.780;QD=36.42;ReadPosRankSum=2.382;VQSLOD=4.1544;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:45.13:0,45,510	1/1:2,6:8:18.06:246,18,0	0/0:35,0:35:99:0,99,1088	0/0:39,0:37:99:0,99,1085	0/0:27,0:27:78.07:0,78,855	0/0:24,0:24:66.19:0,66,748	0/0:20,0:20:54.10:0,54,579	0/0:33,0:33:81.20:0,81,901	1/1:0,24:24:69.23:944,69,0	0/0:31,0:31:87.24:0,87,981	0/0:23,0:22:57.12:0,57,624	0/0:26,0:26:69.18:0,69,773	0/0:32,0:32:90.24:0,90,1008	0/0:31,0:31:84.24:0,84,953	0/0:20,0:20:60.17:0,60,681	0/0:24,1:25:25.15:0,25,674	1/1:2,13:15:36.12:493,36,0	1/1:0,8:7:24.08:328,24,0	1/1:4,16:20:51.08:653,51,0	1/1:0,20:20:60.17:800,60,0	1/1:2,15:17:45.15:616,45,0	0/0:14,0:14:39.11:0,39,442	0/0:29,0:29:81.21:0,81,908	0/0:22,0:22:66.19:0,66,748	0/0:22,0:22:60.15:0,60,669	0/0:31,0:31:93.26:0,93,1047	0/0:33,0:33:90.24:0,90,1010	0/0:7,0:7:18.05:0,18,204
chr10	22283475	.	CA	C	2688.19	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=11.137;DP=639;FS=2.153;HRun=1;HaplotypeScore=123.7735;InbreedingCoeff=0.9833;MQ=76.92;MQ0=0;MQRankSum=-11.830;QD=36.82;ReadPosRankSum=-2.759;VQSLOD=2.7271;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,135,2129	0/0:10,0:10:30.10:0,30,480	0/0:20,0:20:60.09:0,60,853	0/0:17,0:17:48.09:0,48,669	0/0:31,0:31:93.32:0,93,1485	0/0:20,0:20:60.20:0,60,959	0/0:30,0:30:90.27:0,90,1390	1/1:0,27:27:81.26:1114,81,0	0/0:29,0:29:87.30:0,87,1387	1/1:0,20:20:60.20:838,60,0	1/1:0,26:26:63.19:879,63,0	0/0:18,0:18:54.18:0,54,863	0/0:34,0:34:99:0,102,1605	0/0:22,0:22:66.21:0,66,1032	0/0:25,0:25:75.26:0,75,1199	0/0:13,0:13:39.12:0,39,601	0/0:29,0:29:84.26:0,84,1317	0/0:5,0:5:12.04:0,12,192	0/0:22,0:22:66.21:0,66,1031	0/0:35,0:35:99:0,102,1581	0/0:27,0:27:81.28:0,81,1295	0/0:16,0:16:48.16:0,48,767	0/0:22,0:22:63.21:0,63,1003	0/0:12,0:12:36.12:0,36,575	0/0:23,0:23:66.23:0,66,1055	0/0:23,0:23:69.24:0,69,1101	0/0:33,0:32:96.33:0,96,1535	0/0:5,0:5:15.05:0,15,240
chr10	22283488	.	TA	T	3147.33	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=14.572;DP=621;FS=1.349;HRun=4;HaplotypeScore=118.2034;InbreedingCoeff=0.9828;MQ=72.07;MQ0=0;MQRankSum=-8.507;QD=30.26;ReadPosRankSum=-1.215;VQSLOD=2.1911;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,117,1687	0/0:13,0:13:39.13:0,39,578	0/0:17,0:17:35.83:0,36,591	0/0:13,0:13:39.13:0,39,551	1/1:0,27:27:81.25:1000,81,0	0/0:20,0:20:60.20:0,60,899	0/0:28,0:28:84.28:0,84,1259	1/1:7,20:27:57.18:706,57,0	0/0:29,0:29:87.29:0,87,1301	1/1:0,23:23:69.19:837,69,0	1/1:2,25:27:63.19:764,63,0	0/0:18,0:18:54.18:0,54,809	0/0:34,0:34:99:0,99,1473	0/0:20,0:20:60.20:0,60,899	0/0:26,0:26:75.24:0,75,1103	0/0:13,0:13:39.13:0,39,583	0/0:30,0:30:90.30:0,90,1339	0/0:6,0:6:12.04:0,12,178	0/0:23,0:23:69.23:0,69,1034	0/0:29,0:29:87.29:0,87,1304	0/0:28,0:28:84.28:0,84,1257	0/0:11,0:11:33.11:0,33,493	0/0:19,0:19:54.18:0,54,808	0/0:11,0:11:33.03:0,33,444	0/0:19,0:19:57.19:0,57,845	0/0:26,0:26:78.26:0,78,1150	0/0:39,0:39:99:0,117,1712	0/0:4,0:4:12.04:0,12,180
chr10	22284089	.	CTTTTTCT	C	3012.03	PASS	AB=1.000;AC=31;AF=0.705;AN=44;BaseQRankSum=-4.968;DP=179;FS=24.230;HRun=0;HaplotypeScore=53.1631;InbreedingCoeff=0.5134;MQ=68.55;MQ0=1;MQRankSum=-1.174;QD=31.05;ReadPosRankSum=2.161;VQSLOD=1.5935;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:10,0:9:1.92:2,0,271	1/1:6,0:6:15.05:296,15,0	0/0:19,0:8:9.61:0,10,161	0/0:12,0:7:15.49:0,15,156	0/1:9,0:9:13.77:14,0,314	1/1:1,2:3:9.03:182,9,0	1/1:1,0:1:2.98:22,3,0	0/0:12,0:11:3.01:0,3,98	1/1:3,0:3:6.02:118,6,0	./.	0/1:4,0:4:3.58:4,0,5	1/1:7,1:8:7.45:174,7,0	1/1:0,2:2:6.02:135,6,0	1/1:1,5:6:18.06:414,18,0	0/0:6,0:6:17.71:0,18,164	0/0:7,0:7:7.57:0,8,163	./.	1/1:1,0:1:2.98:21,3,0	1/1:9,0:9:12.03:179,12,0	1/1:13,1:14:24.08:486,24,0	./.	1/1:1,1:2:6.02:130,6,0	1/1:1,5:7:12.30:326,12,0	1/1:1,2:3:3.01:71,3,0	1/1:1,8:9:27.07:590,27,0	./.	./.	./.
chr10	22284095	.	CTTTTTTCT	C	2582.56	PASS	AB=0.978;AC=27;AF=0.614;AN=44;BaseQRankSum=-2.490;DP=148;FS=31.249;HRun=0;HaplotypeScore=55.0488;InbreedingCoeff=0.4335;MQ=53.61;MQ0=8;MQRankSum=-1.706;QD=28.38;ReadPosRankSum=2.233;VQSLOD=1.2695;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:12,0:9:1.91:2,0,335	1/1:0,6:6:15.05:399,15,0	0/0:14,0:5:9.74:0,10,184	0/0:11,0:7:17.77:0,18,199	0/0:9,0:11:5.05:0,5,389	1/1:3,0:3:9.02:112,9,0	1/1:1,0:1:0.89:2,1,0	0/0:3,0:1:3.01:0,3,108	1/1:0,3:3:6.02:160,6,0	./.	0/1:2,0:2:3.28:3,0,22	0/1:8,0:8:1.26:81,0,1	0/1:3,0:3:0.69:71,0,1	1/1:6,1:7:1.83:276,2,0	0/0:0,0:6:18.04:0,18,242	0/0:0,0:7:7.63:0,8,242	./.	1/1:1,0:1:2.98:21,3,0	1/1:3,6:9:15.01:261,15,0	1/1:1,12:13:24.08:602,24,0	./.	1/1:1,1:2:6.02:123,6,0	0/1:7,1:8:7.30:219,0,7	1/1:4,0:3:3.01:43,3,0	1/1:9,0:9:26.30:353,26,0	./.	./.	./.
chr10	22284098	.	T	TC	115.59	PASS	AB=0.929;AC=4;AF=0.091;AN=44;BaseQRankSum=0.127;DP=163;FS=2.268;HRun=0;HaplotypeScore=56.6003;InbreedingCoeff=0.1965;MQ=51.66;MQ0=11;MQRankSum=-1.144;QD=7.22;ReadPosRankSum=0.635;VQSLOD=3.1938;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:9:18.01:0,18,203	0/0:6,0:6:13.46:0,13,57	0/0:14,0:5:12.04:0,12,111	0/0:11,0:7:15.33:0,15,159	0/1:10,2:12:26.66:115,0,27	0/0:3,0:3:7.94:0,8,33	0/0:1,0:1:2.98:0,3,22	0/0:3,0:1:3.01:0,3,42	0/0:3,0:3:5.27:0,5,21	./.	1/1:0,2:2:6.02:89,6,0	0/0:9,0:9:17.81:0,18,106	0/0:3,0:3:8.49:0,8,48	0/0:8,0:8:21.61:0,22,105	0/0:6,0:6:17.08:0,17,86	0/0:7,0:7:19.99:0,20,101	./.	0/1:2,0:2:10.27:10,0,15	0/0:9,0:9:23.27:0,23,176	0/0:15,0:15:21.34:0,21,90	./.	0/0:3,0:3:5.81:0,6,23	0/0:10,0:10:11.09:0,11,57	0/0:5,0:3:5.56:0,6,30	0/0:12,0:12:27.41:0,27,116	./.	./.	./.
chr10	22290057	.	TGC	T	70.94	PASS	AC=4;AF=1.00;AN=4;DP=376;FS=0.000;HRun=0;HaplotypeScore=26.5687;MQ=3.49;MQ0=369;QD=3.38;VQSLOD=0.9821;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	1/1:9,2:2:3.01:34,3,0	./.	./.	./.	./.	1/1:7,3:3:9.03:101,9,0	./.	./.	./.
chr10	22290060	.	TGTCCAGGG	T	227.06	PASS	AC=4;AF=1.00;AN=4;DP=366;FS=0.000;HRun=0;HaplotypeScore=26.0813;MQ=3.53;MQ0=359;QD=11.95;VQSLOD=0.7807;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	1/1:7,2:2:3.01:73,3,0	./.	./.	./.	./.	1/1:7,3:3:9.03:218,9,0	./.	./.	./.
chr10	22290620	.	CCTTT	C	1021.08	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=3.422;DP=547;FS=5.374;HRun=0;HaplotypeScore=110.7421;InbreedingCoeff=0.6318;MQ=56.80;MQ0=2;MQRankSum=-1.314;QD=16.74;ReadPosRankSum=2.135;VQSLOD=3.2670;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:5,25:32:58.22:1111,58,0	0/0:9,0:9:21.07:0,21,516	0/0:19,0:10:16.18:0,16,201	0/1:29,0:18:14.81:15,0,314	0/0:25,0:25:51.17:0,51,1252	0/0:6,0:6:18.03:0,18,329	0/0:7,0:7:21.07:0,21,513	0/0:29,0:29:57.16:0,57,1219	0/0:21,0:21:60.21:0,60,1424	0/0:35,0:35:90.30:0,90,2161	0/0:27,0:27:72.25:0,72,1795	0/0:18,0:18:45.15:0,45,1110	0/0:20,0:20:57.18:0,57,1227	0/0:14,0:14:33.11:0,33,819	0/0:12,0:11:36.12:0,36,878	0/0:15,0:15:39.13:0,39,983	0/0:15,0:15:42.14:0,42,1056	0/0:21,0:22:57.19:0,57,1310	0/0:9,0:8:21.06:0,21,490	0/0:24,0:24:63.22:0,63,1588	0/0:7,0:7:21.07:0,21,508	0/0:15,0:15:39.13:0,39,855	0/0:16,0:15:45.15:0,45,1076	0/0:34,0:33:81.19:0,81,1976	0/0:22,0:22:60.21:0,60,1548	0/0:19,0:19:57.20:0,57,1402	0/0:31,0:30:75.26:0,75,1829	0/0:15,0:14:15.33:0,15,905
chr10	22290679	.	CTCTT	C	1877.65	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=5.082;DP=548;FS=10.010;HRun=0;HaplotypeScore=117.1152;InbreedingCoeff=0.9381;MQ=53.63;MQ0=9;MQRankSum=-3.581;QD=31.82;ReadPosRankSum=1.998;VQSLOD=2.9364;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:78.35:0,78,1660	0/0:10,0:10:27.09:0,27,615	0/0:35,0:8:9.02:0,9,140	0/0:39,0:12:11.56:0,12,187	0/0:20,0:20:48.16:0,48,1160	0/0:9,0:9:24.08:0,24,602	0/0:10,0:10:21.06:0,21,524	0/0:28,0:27:66.20:0,66,1420	0/0:19,0:19:51.17:0,51,1177	0/0:24,0:23:66.23:0,66,1633	0/0:29,0:29:60.15:0,60,1332	0/0:12,0:12:24.04:0,24,478	0/0:17,0:17:45.15:0,45,1073	0/0:22,0:22:63.22:0,63,1478	0/0:11,0:11:33.11:0,33,788	0/0:12,0:12:24.08:0,24,565	0/0:18,0:18:41.93:0,42,946	0/0:26,0:26:63.22:0,63,1543	0/0:11,0:11:24.08:0,24,534	0/0:25,0:25:57.14:0,57,1321	0/0:8,0:8:15.05:0,15,359	0/0:11,0:11:9.21:0,9,411	0/0:13,0:13:30.10:0,30,723	0/0:27,0:26:63.21:0,63,1522	0/0:15,0:14:45.15:0,45,960	1/1:2,24:26:69.22:1144,69,0	1/1:3,18:20:24.08:413,24,0	1/1:3,9:12:25.62:463,26,0
chr10	22290732	.	TTC	T	2449.60	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=1.080;DP=543;FS=8.437;HRun=0;HaplotypeScore=141.6881;InbreedingCoeff=0.9537;MQ=61.50;MQ0=10;MQRankSum=1.613;QD=33.56;ReadPosRankSum=-1.547;VQSLOD=4.5963;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:81.28:0,81,1701	0/0:4,0:4:12.04:0,12,219	0/0:45,0:16:9.63:0,10,249	0/0:69,1:28:18.34:0,18,402	0/0:23,0:23:66.21:0,66,1154	0/0:9,0:9:27.09:0,27,491	0/0:8,0:8:21.06:0,21,337	1/1:3,25:27:75.17:976,75,0	0/0:19,0:19:51.16:0,51,878	1/1:2,17:19:48.15:671,48,0	1/1:2,24:26:66.22:945,66,0	0/0:8,0:8:21.07:0,21,381	0/0:18,0:18:48.15:0,48,816	0/0:27,0:27:69.15:0,69,1170	0/0:12,0:11:33.11:0,33,585	0/0:12,0:12:36.04:0,36,591	0/0:13,0:13:36.12:0,36,655	0/0:15,0:15:36.04:0,36,585	0/0:16,0:15:45.10:0,45,771	0/0:20,0:20:57.09:0,57,950	0/0:6,0:6:12.04:0,12,201	0/0:13,0:13:30.27:0,30,646	0/0:13,0:12:36.12:0,36,635	0/0:9,0:9:26.56:0,27,370	0/0:14,0:12:30.10:0,30,525	0/0:23,0:23:66.21:0,66,1136	0/0:26,0:25:57.08:0,57,1002	0/0:9,0:9:24.08:0,24,437
chr10	22290761	.	TCTTTTCTTTTC	T	9369.93	PASS	AB=0.867;AC=30;AF=0.556;AN=54;BaseQRankSum=8.951;DP=496;FS=5.496;HRun=0;HaplotypeScore=176.9394;InbreedingCoeff=0.7893;MQ=53.71;MQ0=10;MQRankSum=-9.063;QD=40.92;ReadPosRankSum=2.768;VQSLOD=4.2135;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:57.19:0,57,2840	1/1:4,0:4:2.98:22,3,0	0/0:43,0:12:20.16:0,20,340	0/1:74,0:25:35.16:35,0,548	0/0:20,0:20:54.19:0,54,2599	1/1:2,4:6:15.05:443,15,0	./.	0/0:34,0:33:69.25:0,69,2794	1/1:10,8:18:39.13:1173,39,0	0/0:25,0:25:57.20:0,57,2912	0/0:24,0:23:63.16:0,63,2740	1/1:4,4:8:21.07:542,21,0	1/1:4,9:13:33.10:947,33,0	1/1:6,8:14:36.12:1012,36,0	0/0:17,0:15:39.13:0,39,2027	0/0:13,0:13:30.10:0,30,1412	1/1:6,4:10:18.06:517,18,0	0/1:7,4:11:18.60:316,0,19	1/1:4,4:8:20.42:541,20,0	1/1:8,9:17:36.11:1036,36,0	1/1:0,3:3:3.01:102,3,0	1/1:3,10:13:36.08:1103,36,0	1/1:9,6:14:27.09:802,27,0	1/1:2,2:4:12.04:316,12,0	1/1:4,5:7:15.05:461,15,0	0/0:18,0:18:48.14:0,48,2037	0/0:33,0:32:72.24:0,72,3324	0/0:10,0:10:21.07:0,21,741
chr10	22290762	.	CTT	C	434.56	PASS	AB=0.957;AC=16;AF=0.286;AN=56;BaseQRankSum=13.146;DP=495;FS=0.000;HRun=4;HaplotypeScore=132.2643;InbreedingCoeff=-0.2398;MQ=52.32;MQ0=10;MQRankSum=-10.782;QD=1.96;ReadPosRankSum=6.360;VQSLOD=-0.4566;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:69.23:0,69,1253	0/0:4,0:4:8.99:0,9,99	0/0:45,0:11:18.94:0,19,267	0/1:75,0:24:3.10:3,0,426	0/0:19,0:19:57.20:0,57,1066	0/1:6,0:6:24.46:24,0,79	0/0:1,0:1:3.01:0,3,50	0/0:34,0:33:75.73:0,76,1352	0/1:17,1:18:64.11:64,0,218	0/0:25,0:25:66.19:0,66,1144	0/0:24,0:23:69.24:0,69,1243	0/1:7,1:8:40.09:40,0,46	0/1:12,1:13:56.47:75,0,56	0/1:13,0:13:37.70:38,0,149	0/0:17,0:15:45.15:0,45,796	0/0:13,0:13:39.09:0,39,644	0/1:9,1:10:43.87:44,0,94	0/1:10,1:11:24.56:25,0,121	0/1:9,0:8:46.22:46,0,100	0/1:15,0:15:55.96:56,0,116	1/1:3,0:3:2.60:10,3,0	0/1:11,1:12:5.62:87,0,6	0/1:13,2:14:59.29:59,0,147	0/1:4,0:4:9.06:9,0,65	0/1:9,0:7:6.46:6,0,112	0/0:18,0:18:54.15:0,54,937	0/0:33,0:32:78.17:0,78,1377	0/0:12,0:12:27.06:0,27,428
chr10	22290767	.	CT	C	1029.18	PASS	AB=0.905;AC=29;AF=0.537;AN=54;BaseQRankSum=11.431;DP=473;FS=3.286;HRun=4;HaplotypeScore=118.6820;InbreedingCoeff=0.7233;MQ=49.98;MQ0=11;MQRankSum=-9.195;QD=4.74;ReadPosRankSum=3.243;VQSLOD=0.0331;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:63.21:0,63,872	1/1:2,0:2:2.98:22,3,0	0/0:43,0:9:15.49:0,15,179	0/1:72,0:22:17.51:18,0,249	0/0:19,0:19:54.18:0,54,756	1/1:6,0:6:12.49:70,12,0	./.	0/0:32,0:31:79.15:0,79,1092	1/1:15,3:18:24.95:146,25,0	0/0:24,0:24:66.22:0,66,920	0/0:24,0:23:63.16:0,63,844	1/1:6,2:8:13.40:102,13,0	1/1:13,0:13:12.40:110,12,0	1/1:10,2:12:31.05:189,31,0	0/0:17,0:15:42.14:0,42,586	0/0:11,0:11:33.11:0,33,461	1/1:8,0:8:8.34:63,8,0	1/1:9,1:10:9.21:61,9,0	1/1:7,1:8:15.34:68,15,0	1/1:14,1:15:29.66:154,30,0	1/1:4,0:4:2.50:9,2,0	1/1:12,0:12:21.39:97,21,0	0/1:10,2:11:1.23:29,0,1	0/1:5,1:6:34.22:40,0,34	1/1:9,1:8:12.33:59,12,0	0/0:17,0:17:48.13:0,48,652	0/0:31,0:30:75.24:0,75,1033	0/0:10,0:10:27.09:0,27,373
chr10	22290770	.	TTC	T	1724.22	PASS	AB=0.996;AC=29;AF=0.537;AN=54;BaseQRankSum=13.141;DP=468;FS=1.366;HRun=0;HaplotypeScore=125.7330;InbreedingCoeff=0.7329;MQ=50.96;MQ0=11;MQRankSum=-8.535;QD=8.21;ReadPosRankSum=1.860;VQSLOD=3.6424;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:66.23:0,66,1288	1/1:1,0:1:2.98:22,3,0	0/0:43,0:11:18.39:0,18,294	0/1:71,1:22:25.47:25,0,391	0/0:19,0:19:57.18:0,57,1117	1/1:5,0:5:14.38:78,14,0	./.	0/0:31,0:30:75.89:0,76,1557	1/1:13,2:15:32.11:240,32,0	0/0:24,0:24:69.24:0,69,1355	0/0:24,0:23:66.17:0,66,1240	1/1:9,1:10:25.91:163,26,0	1/1:13,1:14:37.98:243,38,0	1/1:12,0:12:27.57:149,28,0	0/0:16,0:14:42.14:0,42,843	0/0:11,0:11:33.11:0,33,660	1/1:6,1:7:17.46:109,17,0	1/1:7,2:9:8.13:119,8,0	0/1:8,0:7:1.51:63,0,2	1/1:12,2:14:39.88:251,40,0	1/1:3,1:4:2.90:16,3,0	1/1:12,1:13:35.02:211,35,0	1/1:8,2:9:13.46:128,13,0	0/1:6,0:6:25.33:32,0,25	1/1:7,1:6:9.51:82,10,0	0/0:17,0:17:51.10:0,51,953	0/0:32,0:32:81.27:0,81,1547	0/0:15,0:15:42.12:0,42,727
chr10	22290773	.	CTT	C	560.50	PASS	AB=0.964;AC=16;AF=0.308;AN=52;BaseQRankSum=12.226;DP=466;FS=0.000;HRun=4;HaplotypeScore=131.6700;InbreedingCoeff=-0.0677;MQ=49.72;MQ0=10;MQRankSum=-9.485;QD=4.15;ReadPosRankSum=6.073;VQSLOD=-0.4780;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:63.22:0,63,1170	./.	0/0:42,0:11:22.07:0,22,302	0/0:70,0:20:18.29:0,18,371	0/0:20,0:20:60.21:0,60,1102	1/1:4,0:4:10.98:50,11,0	./.	0/0:35,0:34:84.75:0,85,1533	0/1:13,2:15:49.78:93,0,50	0/0:24,0:24:69.24:0,69,1292	0/0:24,0:23:63.22:0,63,1160	0/1:11,0:11:18.49:18,0,111	0/1:12,0:12:58.22:68,0,58	0/1:13,0:13:9.94:91,0,10	0/0:16,0:14:42.14:0,42,786	0/0:11,0:11:33.11:0,33,617	0/1:5,0:5:9.12:35,0,9	0/1:9,0:9:11.26:11,0,29	0/1:9,0:8:39.09:39,0,58	0/1:14,0:14:36.20:100,0,36	1/1:4,0:4:2.74:12,3,0	0/1:12,0:12:15.10:91,0,15	0/1:11,1:11:34.32:34,0,90	0/1:6,0:7:29.29:38,0,29	0/1:7,1:6:3.84:37,0,4	0/0:16,0:16:48.16:0,48,858	0/0:33,0:33:81.27:0,81,1485	0/0:15,0:15:36.07:0,36,634
chr10	22290822	.	TTTTCC	T	7350.60	PASS	AB=0.673;AC=29;AF=0.518;AN=56;BaseQRankSum=8.479;DP=509;FS=10.247;HRun=0;HaplotypeScore=144.8529;InbreedingCoeff=0.6130;MQ=56.16;MQ0=11;MQRankSum=-10.873;QD=27.95;ReadPosRankSum=3.238;VQSLOD=3.9470;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:36.04:0,36,871	1/1:0,3:3:5.75:119,6,0	0/0:49,0:14:6.70:0,7,103	0/1:57,0:14:9.11:9,0,189	0/0:20,0:20:53.98:0,54,1241	1/1:3,2:5:11.97:195,12,0	0/1:1,2:3:38.56:111,0,39	0/0:24,0:24:48.04:0,48,921	1/1:3,12:15:33.11:658,33,0	0/0:35,0:35:99:0,99,2672	0/0:17,0:17:47.99:0,48,1115	1/1:2,10:12:33.08:619,33,0	1/1:5,14:19:26.64:768,27,0	1/1:5,11:16:33.06:617,33,0	0/0:16,0:15:21.06:0,21,878	0/0:10,0:10:15.05:0,15,450	0/1:3,12:15:35.60:345,0,36	0/1:6,12:18:99:375,0,275	1/1:3,11:13:33.01:484,33,0	1/1:3,16:19:45.15:886,45,0	1/1:1,1:2:5.89:75,6,0	1/1:3,14:17:35.94:585,36,0	1/1:1,17:18:39.13:751,39,0	0/1:5,9:14:6.82:157,0,7	1/1:0,16:15:30.10:598,30,0	0/0:22,0:22:66.16:0,66,1630	0/0:25,0:25:75.26:0,75,2068	0/0:11,0:11:33.11:0,33,987
chr10	22290824	.	TTC	T	624.30	PASS	AB=0.984;AC=21;AF=0.375;AN=56;BaseQRankSum=10.941;DP=505;FS=6.547;HRun=0;HaplotypeScore=142.8375;InbreedingCoeff=0.1195;MQ=56.36;MQ0=11;MQRankSum=-10.477;QD=3.08;ReadPosRankSum=6.383;VQSLOD=1.2987;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:42.04:0,42,723	1/1:3,0:3:4.99:17,5,0	0/0:49,0:15:7.57:0,8,247	0/0:55,0:14:22.37:0,22,315	0/0:21,0:21:51.08:0,51,1053	0/1:5,0:5:10.42:10,0,71	0/1:3,0:3:9.42:9,0,27	0/0:23,0:23:66.19:0,66,1198	1/1:12,0:12:27.32:95,27,0	0/0:36,0:36:99:0,102,2001	0/0:17,0:17:48.16:0,48,939	0/1:12,0:12:41.07:56,0,41	0/1:18,1:19:21.45:87,0,21	0/1:15,0:15:53.34:53,0,84	0/0:16,0:15:23.51:0,24,715	0/0:10,0:10:15.05:0,15,305	0/1:15,0:15:34.98:35,0,49	0/1:19,0:19:27.08:27,0,198	0/1:14,0:13:15.37:15,0,164	0/1:19,0:19:30.06:79,0,30	1/1:1,1:2:5.51:51,6,0	0/1:17,0:17:31.43:31,0,152	1/1:18,0:18:18.99:87,19,0	0/1:12,2:14:38.12:66,0,38	1/1:16,0:15:24.58:87,25,0	0/0:22,0:22:66.23:0,66,1311	0/0:25,0:25:75.26:0,75,1522	0/0:11,0:11:33.11:0,33,669
chr10	22290856	.	TTTC	T	2330.40	PASS	AB=0.859;AC=22;AF=0.393;AN=56;BaseQRankSum=5.556;DP=540;FS=11.218;HRun=0;HaplotypeScore=181.4824;InbreedingCoeff=-0.6552;MQ=48.96;MQ0=3;MQRankSum=-7.408;QD=5.18;ReadPosRankSum=-5.444;VQSLOD=0.0682;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:19,0:19:12.05:12,0,586	0/1:5,1:6:84.33:84,0,117	0/0:18,0:9:20.96:0,21,272	0/0:19,0:8:17.95:0,18,234	0/1:36,7:43:99:173,0,1121	0/1:4,5:8:99:170,0,167	0/0:3,3:6:6.01:0,6,90	0/0:24,0:24:54.18:0,54,1051	0/1:15,4:19:99:183,0,696	0/1:31,4:34:94.58:95,0,1635	0/1:15,5:19:99:143,0,730	0/1:11,4:15:95.94:96,0,601	0/1:14,6:20:99:146,0,512	0/1:14,0:14:33.05:33,0,596	0/1:7,3:8:97.45:97,0,158	0/1:13,3:16:60.48:160,0,60	0/1:24,1:24:82.53:83,0,509	0/1:22,0:21:40.52:41,0,581	0/0:14,0:13:39.12:0,39,755	0/1:18,4:22:99:174,0,769	0/1:4,0:4:49.87:73,0,50	0/1:16,7:22:99:136,0,731	0/1:21,9:28:99:177,0,627	0/1:12,0:12:41.16:41,0,100	0/1:17,7:23:99:129,0,641	0/1:28,3:30:48.75:49,0,1164	0/1:24,7:30:99:193,0,680	0/0:9,0:9:27.09:0,27,547
chr10	22290870	.	CTTTG	C	2069	PASS	AB=0.917;AC=17;AF=0.304;AN=56;BaseQRankSum=2.616;DP=587;FS=5.686;HRun=0;HaplotypeScore=204.2853;InbreedingCoeff=-0.3339;MQ=46.52;MQ0=5;MQRankSum=-0.921;QD=5.96;ReadPosRankSum=-7.029;VQSLOD=0.1887;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:27.70:0,28,326	0/1:8,0:8:15.96:16,0,27	0/0:11,0:2:3:0,3,27	0/0:14,0:7:7.49:0,7,220	0/1:47,0:47:24.86:25,0,730	0/1:8,3:10:99:123,0,222	0/1:8,0:8:39.41:39,0,70	0/0:29,0:26:63.20:0,63,1219	0/1:19,0:19:77.79:78,0,201	0/0:36,0:34:99:0,101,1944	0/0:23,0:22:53.80:0,54,709	0/1:12,3:15:99:112,0,167	0/0:18,1:19:10.53:0,11,306	0/1:14,0:14:50.81:78,0,51	0/0:17,0:14:23.05:0,23,178	0/0:18,0:17:3.46:0,3,293	0/0:29,0:29:32.59:0,33,615	0/1:24,0:24:33.53:34,0,173	0/0:14,0:13:23.30:0,23,269	0/1:25,0:25:88.03:88,0,120	1/1:4,0:4:4.74:24,5,0	0/1:24,6:29:99:236,0,319	0/1:23,8:29:99:406,0,114	0/1:11,0:11:18.48:18,0,22	0/1:25,7:31:99:426,0,164	0/1:30,6:35:99:273,0,859	0/1:26,5:30:99:253,0,370	0/0:7,0:6:17.67:0,18,113
chr10	22290874	.	G	GTTTC	4297.04	PASS	AB=0.972;AC=22;AF=0.423;AN=52;BaseQRankSum=-1.652;DP=577;FS=4.948;HRun=0;HaplotypeScore=199.8547;InbreedingCoeff=-0.5885;MQ=45.46;MQ0=7;MQRankSum=0.216;QD=9.63;ReadPosRankSum=-6.200;VQSLOD=1.4532;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:4.91:0,5,277	0/1:8,0:8:55.88:59,0,56	./.	0/0:12,0:6:8.70:0,9,100	0/1:46,0:46:99:109,0,609	0/1:10,1:10:99:232,0,144	0/1:7,0:7:25.84:42,0,26	0/0:29,0:24:54.09:0,54,749	0/1:18,0:18:26.81:27,0,236	0/0:35,0:33:68.38:0,68,1145	0/1:22,0:21:39.47:39,0,273	0/1:12,0:12:99:151,0,192	0/1:17,1:18:98:98,0,334	0/1:12,2:14:99:130,0,129	0/1:17,0:14:39.72:120,0,40	0/1:17,0:16:46:115,0,46	0/1:31,0:30:61.38:61,0,311	0/1:26,0:24:34.90:35,0,240	0/0:14,0:12:20.60:0,21,235	0/1:24,0:24:15.95:16,0,219	1/1:3,0:3:8.91:64,9,0	0/1:28,2:29:99:527,0,383	0/1:30,1:29:99:653,0,221	0/1:10,1:11:56.51:62,0,57	0/1:32,1:32:99:711,0,221	0/1:36,1:36:6.18:507,0,6	0/1:28,1:29:39.72:537,0,40	./.
chr10	22290878	.	CTTTG	C	5279.97	PASS	AB=0.939;AC=23;AF=0.426;AN=54;BaseQRankSum=-2.497;DP=581;FS=7.827;HRun=0;HaplotypeScore=194.5317;InbreedingCoeff=-0.4890;MQ=44.73;MQ0=7;MQRankSum=1.032;QD=11.95;ReadPosRankSum=-4.696;VQSLOD=2.4647;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:24.57:0,25,307	0/1:3,5:8:15.10:225,0,15	./.	0/0:10,0:4:7.79:0,8,53	0/1:38,8:46:99:495,0,672	0/1:11,0:10:99:109,0,174	0/1:7,0:7:36.96:39,0,37	0/0:32,0:27:32.57:0,33,346	0/1:11,7:18:99:392,0,229	0/1:33,0:31:99:116,0,673	0/1:23,0:22:96.84:122,0,97	0/1:12,0:12:99:112,0,141	0/0:18,0:18:10.81:0,11,271	0/1:14,0:14:59.55:81,0,60	0/1:17,0:14:29.11:61,0,29	0/1:17,0:16:60.40:60,0,91	0/0:32,0:31:32.44:0,32,670	0/1:24,2:24:99:170,0,184	0/0:13,0:11:28.88:0,29,353	0/1:18,11:29:86.76:850,0,87	1/1:1,2:3:9.03:158,9,0	0/1:31,0:30:99:273,0,263	0/1:31,0:29:99:413,0,102	0/1:11,0:11:17.09:32,0,17	0/1:33,0:32:99:380,0,171	0/1:38,0:37:99:647,0,168	0/1:32,0:31:80.29:527,0,80	1/1:2,0:1:2.96:19,3,0
chr10	22290882	.	GTTTC	G	3123.28	PASS	AB=0.974;AC=26;AF=0.520;AN=50;BaseQRankSum=1.392;DP=576;FS=14.175;HRun=0;HaplotypeScore=198.8221;InbreedingCoeff=-0.1867;MQ=44.27;MQ0=6;MQRankSum=1.509;QD=6.76;ReadPosRankSum=-3.114;VQSLOD=1.3371;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:29.75:0,30,364	1/1:8,0:8:14.53:135,15,0	./.	./.	0/1:43,0:46:99:291,0,283	0/1:12,0:11:52.84:53,0,131	0/1:8,0:8:13.49:13,0,49	1/1:25,4:24:5.99:61,6,0	0/1:18,0:18:99:241,0,111	0/1:23,13:34:99:459,0,173	1/1:18,4:21:30.07:361,30,0	0/1:11,0:11:26.92:69,0,27	0/0:18,0:18:6.35:0,6,124	0/1:13,0:13:23.12:23,0,23	1/1:15,2:14:17.98:185,18,0	0/1:16,2:17:35.81:165,0,36	0/0:32,0:31:37.14:0,37,756	0/1:25,0:24:71.63:72,0,97	0/0:12,0:10:12.04:0,12,232	1/1:31,0:31:7.89:458,8,0	0/1:3,0:4:11.98:78,0,12	0/1:31,0:30:82.50:82,0,160	1/1:29,0:27:12.31:179,12,0	0/0:11,0:11:5.32:0,5,22	0/1:32,0:31:99:153,0,121	0/1:39,0:38:99:107,0,438	0/1:32,0:31:99:103,0,141	./.
chr10	22290886	.	C	CTTTG	9300.80	PASS	AB=0.996;AC=38;AF=0.704;AN=54;BaseQRankSum=3.207;DP=580;FS=4.979;HRun=0;HaplotypeScore=173.0677;InbreedingCoeff=-0.2935;MQ=44.80;MQ0=6;MQRankSum=1.188;QD=16.35;ReadPosRankSum=4.471;VQSLOD=4.1551;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:25:68.75:69,0,243	1/1:8,0:8:20.52:217,21,0	./.	0/0:6,0:2:5.99:0,6,51	1/1:46,0:46:72.78:851,73,0	0/1:12,0:11:41.36:185,0,41	0/1:9,0:9:33.55:34,0,48	1/1:29,0:24:8.79:304,9,0	0/1:20,0:20:29.14:304,0,29	1/1:32,1:31:92.68:945,93,0	1/1:5,17:21:56.27:779,56,0	1/1:10,0:10:6.15:177,6,0	0/1:18,0:18:14.66:184,0,15	0/1:13,0:13:13.39:148,0,13	1/1:7,11:15:18.06:459,18,0	1/1:5,14:19:27.04:545,27,0	0/1:32,2:33:99:434,0,480	0/1:26,0:24:20.99:187,0,21	0/1:12,0:10:99:111,0,123	1/1:29,0:29:31.42:507,31,0	0/1:4,0:4:11.96:119,0,12	0/1:30,0:29:16.32:472,0,16	1/1:31,0:29:58.13:579,58,0	0/1:11,0:11:18.51:71,0,19	0/1:33,0:32:33.26:508,0,33	0/1:41,0:40:30.07:602,0,30	1/1:32,0:31:11.08:493,11,0	1/1:3,0:1:2.94:18,3,0
chr10	22291404	.	T	TC	9736.34	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-17.113;DP=776;FS=7.089;HRun=1;HaplotypeScore=76.4947;InbreedingCoeff=0.9999;MQ=93.11;MQ0=0;MQRankSum=-1.197;QD=40.40;ReadPosRankSum=3.872;VQSLOD=5.4358;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,120,1541	0/0:12,0:12:36.12:0,36,467	0/0:31,0:31:90.23:0,90,1102	0/0:35,0:35:90.24:0,90,1135	0/0:28,0:28:84.26:0,84,1077	1/1:1,25:26:66.22:990,66,0	1/1:1,29:30:75.25:1124,75,0	0/0:35,0:35:99:0,102,1286	0/0:25,0:25:75.24:0,75,974	0/0:33,0:33:99:0,99,1284	0/0:27,0:27:78.25:0,78,1012	1/1:0,24:24:69.23:1034,69,0	1/1:0,32:32:81.27:1214,81,0	1/1:0,20:20:54.18:809,54,0	0/0:38,0:38:99:0,114,1455	0/0:26,0:26:78.25:0,78,1013	0/0:28,0:28:81.26:0,81,1052	0/0:11,0:11:30.10:0,30,389	0/0:22,0:21:66.19:0,66,840	0/0:26,0:26:78.24:0,78,999	0/0:37,0:37:99:0,108,1388	1/1:0,28:28:84.28:1258,84,0	1/1:1,24:25:69.22:1013,69,0	1/1:2,31:33:93.32:1394,93,0	1/1:2,21:23:60.20:899,60,0	0/0:40,0:40:99:0,117,1504	0/0:27,0:26:72.23:0,72,934	0/0:11,0:11:33.11:0,33,428
chr10	22293005	.	TACACACACACACACACACACACACACACAC	T	1656.44	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=2.135;DP=393;FS=8.910;HRun=0;HaplotypeScore=241.3569;InbreedingCoeff=0.7323;MQ=69.85;MQ0=17;MQRankSum=-3.308;QD=33.80;ReadPosRankSum=0.212;VQSLOD=1.2737;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:30.08:0,30,2269	0/0:5,0:5:12.04:0,12,1306	0/0:28,0:11:3.01:0,3,66	0/0:34,0:22:6.91:0,7,119	0/0:11,0:11:18.06:0,18,1772	0/0:13,0:13:21.07:0,21,2018	0/0:16,0:16:30.09:0,30,2367	1/1:19,0:19:0.87:81,1,0	0/0:8,0:8:18.06:0,18,1252	1/1:8,1:9:12.03:548,12,0	1/1:7,13:19:15.05:1150,15,0	0/0:6,0:6:12.04:0,12,1151	0/0:6,0:7:15.05:0,15,1528	0/0:7,0:6:15.05:0,15,1469	0/0:12,0:16:27.09:0,27,1625	0/0:10,0:12:21.07:0,21,1382	0/0:16,0:16:18.05:0,18,1160	0/0:15,0:17:44.15:0,44,3384	0/0:11,0:11:21.07:0,21,1397	0/0:17,0:18:27.08:0,27,2577	0/0:11,0:9:18.04:0,18,1172	0/0:12,0:12:24.08:0,24,2519	0/0:13,0:14:24.07:0,24,2254	0/0:21,0:21:36.59:0,37,3179	0/0:9,0:9:21.07:0,21,1733	0/0:19,0:19:33.11:0,33,2463	0/0:11,0:12:33.11:0,33,2391	0/0:4,0:3:6.02:0,6,525
chr10	22294453	.	T	TA	2421.41	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-11.118;DP=409;FS=3.029;HRun=7;HaplotypeScore=36.2584;InbreedingCoeff=0.9053;MQ=66.18;MQ0=0;MQRankSum=0.950;QD=31.86;ReadPosRankSum=-1.432;VQSLOD=2.8936;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:42.08:0,42,428	0/0:7,0:7:15.03:0,15,153	0/0:14,0:14:23.47:0,23,301	0/0:8,0:7:15.03:0,15,153	0/0:17,0:17:51.12:0,51,520	0/0:19,0:19:54.12:0,54,550	0/0:9,0:9:21.05:0,21,214	1/1:5,27:32:81.26:1018,81,0	0/0:13,0:13:30.07:0,30,305	1/1:0,23:23:66.21:829,66,0	1/1:1,20:21:57.18:717,57,0	0/0:10,0:10:30.07:0,30,306	0/0:15,0:15:36.08:0,36,367	0/0:13,0:13:33.07:0,33,337	0/0:11,0:11:33.08:0,33,337	0/0:14,0:14:39.09:0,39,398	0/0:19,0:19:54.10:0,54,543	0/0:16,0:16:36.06:0,36,359	0/0:10,0:10:27.06:0,27,274	0/0:18,0:18:42.09:0,42,428	0/0:1,0:1:3.01:0,3,31	0/0:8,0:8:21.04:0,21,208	0/0:7,0:7:18.04:0,18,183	0/0:3,0:3:9.02:0,9,92	0/0:21,0:21:57.13:0,57,581	0/0:17,0:17:48.09:0,48,481	0/0:32,0:32:90.18:0,90,911	0/0:10,0:10:30.07:0,30,306
chr10	22295780	.	A	ATGTGTGTGTG	2199.48	PASS	AB=1.000;AC=22;AF=0.393;AN=56;BaseQRankSum=7.953;DP=493;FS=1.755;HRun=0;HaplotypeScore=157.1773;InbreedingCoeff=-0.5132;MQ=67.65;MQ0=8;MQRankSum=-7.421;QD=6.38;ReadPosRankSum=0.250;VQSLOD=2.5685;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,9:19:4.09:273,4,0	0/1:6,0:6:7.95:8,0,156	0/0:24,0:13:35.99:0,36,413	0/0:25,0:18:50.96:0,51,761	0/1:16,0:16:67.03:67,0,392	0/1:33,0:33:99:112,0,733	0/1:17,0:17:25.30:25,0,352	0/0:25,0:25:69.12:0,69,1075	0/1:22,0:21:25.21:25,0,400	0/0:24,0:24:69.20:0,69,1473	0/0:23,0:23:45.08:0,45,805	0/1:11,0:11:99:208,0,111	0/1:16,0:16:99:137,0,339	0/1:12,0:12:92.59:93,0,203	0/1:25,0:24:44.79:45,0,551	0/1:11,0:11:74.51:75,0,338	0/1:19,0:18:19.62:20,0,179	0/1:4,0:4:48.93:49,0,61	0/0:15,0:15:25.08:0,25,441	0/1:12,0:12:76.47:76,0,112	0/1:20,0:19:19.65:20,0,234	0/1:8,0:8:27.90:401,0,28	0/0:12,0:12:18.03:0,18,244	0/1:19,0:17:99:223,0,244	0/1:15,0:15:99:166,0,331	0/1:30,0:29:99:190,0,791	0/1:25,0:25:99:140,0,346	0/1:5,0:5:9.70:10,0,92
chr10	22295782	.	ATGTGTGTGTG	A	2028.90	PASS	AB=0.946;AC=7;AF=0.125;AN=56;BaseQRankSum=0.822;DP=576;FS=1.650;HRun=0;HaplotypeScore=175.1084;InbreedingCoeff=0.5994;MQ=62.11;MQ0=9;MQRankSum=-1.491;QD=18.96;ReadPosRankSum=-0.172;VQSLOD=3.0654;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:8.34:0,8,348	0/0:8,0:8:9.03:0,9,328	0/0:24,0:13:3.01:0,3,142	0/0:25,0:17:15.03:0,15,283	0/0:28,0:27:23.55:0,24,819	0/0:27,0:37:12.04:0,12,428	0/0:23,0:23:15.05:0,15,529	1/1:20,5:25:12.02:192,12,0	0/0:12,0:25:21:0,21,587	1/1:9,14:24:42.13:1091,42,0	1/1:11,12:23:30.10:777,30,0	0/0:12,0:13:9.03:0,9,289	0/0:15,0:22:20.80:0,21,675	0/0:12,0:14:11.96:0,12,311	0/0:27,0:26:21.07:0,21,747	0/0:13,0:14:9.01:0,9,225	0/0:9,0:20:21:0,21,839	0/0:3,0:4:3.01:0,3,131	0/0:15,0:15:24.05:0,24,830	0/0:10,0:16:21.01:0,21,650	0/0:15,0:20:12.04:0,12,394	0/0:6,0:9:21.07:0,21,785	0/0:16,0:16:5.98:0,6,161	0/0:21,0:24:19.64:0,20,676	0/0:15,0:17:6.49:0,6,252	0/1:31,2:34:99:112,0,2082	0/0:17,0:30:29.73:0,30,1087	0/0:4,0:7:9.03:0,9,348
chr10	22296139	.	T	TA	1232.83	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-9.174;DP=542;FS=6.774;HRun=4;HaplotypeScore=57.9153;InbreedingCoeff=0.9922;MQ=78.43;MQ0=0;MQRankSum=-0.500;QD=33.32;ReadPosRankSum=1.161;VQSLOD=4.2049;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,102,1156	0/0:6,0:6:18.05:0,18,204	0/0:11,0:11:21.06:0,21,237	0/0:14,0:14:32.14:0,32,349	0/0:28,0:28:78.22:0,78,885	0/0:22,0:22:63.18:0,63,715	0/0:19,0:19:57.15:0,57,635	0/0:31,0:31:84.22:0,84,944	0/0:18,0:18:48.12:0,48,533	0/0:25,0:25:66.19:0,66,749	0/0:20,0:20:57.15:0,57,637	0/0:10,0:10:30.09:0,30,340	0/0:18,0:18:51.15:0,51,579	0/0:17,0:17:51.15:0,51,579	1/1:1,18:19:51.17:698,51,0	1/1:0,18:18:48.16:657,48,0	0/0:25,0:25:72.20:0,72,816	0/0:14,0:14:42.12:0,42,476	0/0:18,0:18:51.15:0,51,579	0/0:22,0:22:60.17:0,60,681	0/0:19,0:19:57.16:0,57,647	0/0:14,0:14:36.10:0,36,408	0/0:8,0:8:24.07:0,24,272	0/0:24,0:24:72.21:0,72,817	0/0:26,0:26:78.22:0,78,884	0/0:23,0:23:63.16:0,63,698	0/0:25,0:24:75.21:0,75,851	0/0:13,0:13:36.10:0,36,408
chr10	22299536	.	C	CTT	2720.88	PASS	AB=0.673;AC=27;AF=0.482;AN=56;BaseQRankSum=1.845;DP=653;FS=2.742;HRun=12;HaplotypeScore=106.9513;InbreedingCoeff=0.3639;MQ=70.77;MQ0=5;MQRankSum=-2.971;QD=6.45;ReadPosRankSum=-0.378;VQSLOD=0.9903;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:8,1:28:17.90:151,18,0	0/0:10,0:10:26.95:0,27,238	0/0:31,0:20:11.57:0,12,118	0/0:26,0:16:7.30:0,7,100	0/1:10,0:25:21.73:73,0,22	0/1:9,3:22:28.01:142,0,28	1/1:4,0:17:24.95:87,25,0	0/1:6,0:22:6.51:7,0,109	0/0:18,0:18:13.35:0,13,278	0/0:5,0:30:62.90:0,63,273	0/0:2,0:24:57.47:0,57,249	1/1:2,1:14:13.45:88,13,0	0/1:7,0:19:22.58:23,0,61	1/1:9,0:24:10.45:36,10,0	1/1:21,0:19:23.51:139,24,0	1/1:20,0:19:23.45:121,23,0	0/1:21,1:24:3.28:3,0,387	0/0:31,0:31:71.88:0,72,652	0/0:20,0:23:11.60:0,12,282	0/0:28,0:30:47.38:0,47,473	0/0:8,0:8:17.97:0,18,167	0/1:9,0:27:45.22:115,0,45	0/1:5,0:26:9.57:93,0,10	0/1:5,0:20:27.04:49,0,27	0/1:6,0:28:45.53:80,0,46	1/1:6,24:36:82.36:953,82,0	1/1:8,17:30:40.39:448,40,0	1/1:3,13:16:25.15:314,25,0
chr10	22300071	.	GCATGTTCCCT	G	11683.93	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=13.202;DP=634;FS=4.486;HRun=0;HaplotypeScore=217.6773;InbreedingCoeff=0.9706;MQ=77.64;MQ0=0;MQRankSum=-14.723;QD=66.39;ReadPosRankSum=1.749;VQSLOD=4.6966;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,147,6939	1/1:0,6:6:12.04:407,12,0	0/0:17,0:17:48.16:0,48,2297	0/0:15,0:15:36.55:0,37,1423	0/0:28,0:28:84.29:0,84,4502	0/0:22,0:22:66.23:0,66,3417	0/0:25,0:25:75.24:0,75,3813	0/0:34,0:34:96.33:0,96,4422	1/1:1,17:18:36.12:1220,36,0	0/0:25,0:25:75.24:0,75,3663	0/0:24,0:24:69.24:0,69,3694	0/0:22,0:22:66.21:0,66,3196	0/0:23,0:23:69.22:0,69,3101	0/0:22,0:22:66.21:0,66,3395	0/0:29,0:29:87.28:0,87,4469	0/0:22,0:22:66.23:0,66,3374	1/1:2,24:26:51.18:1729,51,0	1/1:2,9:11:6.02:203,6,0	1/1:3,11:14:30.04:685,30,0	1/1:0,28:28:78.27:2564,78,0	1/1:4,15:19:24.08:767,24,0	0/0:33,0:33:99:0,99,5022	0/0:18,0:18:54.19:0,54,2817	0/0:23,0:23:69.21:0,69,3321	0/0:26,0:26:78.27:0,78,3978	1/1:2,21:23:63.18:1874,63,0	1/1:5,23:28:57.20:1931,57,0	1/1:0,3:3:9.03:305,9,0
chr10	22300660	.	TACACAC	T	1719.58	PASS	AB=1.000;AC=17;AF=0.354;AN=48;BaseQRankSum=6.507;DP=570;FS=3.214;HRun=0;HaplotypeScore=126.8281;InbreedingCoeff=0.8033;MQ=61.20;MQ0=26;MQRankSum=-7.105;QD=8.77;ReadPosRankSum=-0.648;VQSLOD=2.6535;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:28:12.63:17,0,13	0/0:6,0:7:6.02:0,6,126	./.	./.	./.	1/1:15,9:23:10.44:185,10,0	1/1:12,7:19:12.08:244,12,0	0/0:31,0:31:28.65:0,29,676	0/0:12,0:11:21.54:0,22,540	0/0:16,0:15:27.09:0,27,662	0/0:22,0:21:11.87:0,12,333	1/1:8,4:13:9.03:164,9,0	1/1:13,9:23:27.09:529,27,0	./.	0/0:6,0:6:15.05:0,15,361	0/0:20,0:20:24:0,24,461	0/0:30,0:32:45.15:0,45,1155	0/0:14,0:16:21.51:0,22,417	0/0:15,0:14:17.08:0,17,416	0/0:18,0:19:21.07:0,21,555	0/0:21,0:23:39.12:0,39,898	1/1:12,5:18:9.50:164,10,0	1/1:15,5:20:6.49:122,6,0	1/1:14,4:19:9.46:142,9,0	1/1:24,6:31:18.06:334,18,0	0/0:22,0:21:41.17:0,41,1018	0/0:15,0:15:14.97:0,15,222	0/0:7,0:7:6.02:0,6,156
chr10	22300700	.	CACACA	C	477.65	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=8.247;DP=651;FS=33.710;HRun=0;HaplotypeScore=145.1991;InbreedingCoeff=-0.1405;MQ=63.24;MQ0=36;MQRankSum=-6.140;QD=1.76;ReadPosRankSum=2.402;VQSLOD=1.2349;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,19:21:3.48:70,3,0	0/0:7,0:7:14.96:0,15,216	0/0:37,0:18:54.01:0,54,697	0/0:40,0:24:66.95:0,67,816	0/0:15,0:15:34.16:0,34,437	0/1:23,0:21:22.13:22,0,319	0/1:24,0:24:26.22:26,0,453	0/0:32,0:32:96.10:0,96,1471	0/0:22,0:22:63.67:0,64,1240	0/0:28,0:27:79.50:0,80,1284	0/0:16,0:16:20.86:0,21,420	0/1:18,0:18:13.22:13,0,427	0/1:23,0:23:99:120,0,302	0/0:13,0:13:32.98:0,33,412	0/1:17,0:10:98.36:98,0,230	0/0:17,0:17:12.73:0,13,290	0/0:38,0:38:99:0,100,2049	0/0:27,0:27:71.35:0,71,1253	0/0:23,0:22:64.77:0,65,1079	0/0:21,0:21:46.71:0,47,862	0/0:38,0:38:90.29:0,90,1606	0/1:17,0:17:18.47:18,0,356	0/1:17,0:17:0.39:0,0,363	0/1:17,0:17:13.73:14,0,213	0/1:29,0:29:42.39:42,0,530	0/1:30,0:26:99:183,0,779	0/1:26,0:18:17.48:17,0,123	0/0:6,0:6:6.02:0,6,98
chr10	22300733	.	CTACTT	C	2291.31	PASS	AB=0.913;AC=7;AF=0.125;AN=56;BaseQRankSum=4.605;DP=544;FS=15.179;HRun=0;HaplotypeScore=120.0104;InbreedingCoeff=0.7924;MQ=92.37;MQ0=20;MQRankSum=-6.525;QD=35.80;ReadPosRankSum=-1.682;VQSLOD=2.0393;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:17:27.09:0,27,821	0/0:4,0:4:12.04:0,12,372	0/0:32,0:30:66:0,66,2332	0/0:30,0:29:75.15:0,75,1921	0/0:17,0:17:51.18:0,51,1581	0/0:20,0:19:54.19:0,54,1621	0/0:20,0:20:57.20:0,57,1738	1/1:1,15:16:45.14:904,45,0	0/0:19,0:19:57.20:0,57,1761	1/1:3,16:19:45.15:943,45,0	1/1:0,8:8:24.08:503,24,0	0/0:23,0:23:66.18:0,66,1909	0/0:21,0:21:63.22:0,63,1904	0/0:12,0:12:36.12:0,36,1114	0/0:17,0:11:33.11:0,33,773	0/0:13,0:13:18.06:0,18,399	0/0:38,0:38:99:0,111,3314	0/0:19,0:19:57.20:0,57,1766	0/0:15,0:15:42.14:0,42,1224	0/0:22,0:22:66.21:0,66,1926	0/0:26,0:26:71.92:0,72,2091	0/0:15,0:15:42.14:0,42,1302	0/0:23,0:23:69.19:0,69,2044	0/0:15,0:15:45.15:0,45,1290	0/0:25,0:25:75.26:0,75,2326	0/1:19,2:18:89.83:90,0,894	0/0:19,0:12:5.41:0,5,185	0/0:10,0:10:18.06:0,18,558
chr10	22301400	.	ACTCT	A	2333.13	PASS	AB=0.787;AC=28;AF=0.500;AN=56;BaseQRankSum=2.393;DP=548;FS=2.638;HRun=0;HaplotypeScore=138.1479;InbreedingCoeff=0.4648;MQ=64.47;MQ0=4;MQRankSum=-7.243;QD=7.45;ReadPosRankSum=1.089;VQSLOD=2.7299;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:29:29.79:0,30,518	0/0:11,0:11:21.07:0,21,461	0/0:19,0:10:3.01:0,3,67	0/0:35,0:20:6.02:0,6,87	0/1:20,1:25:27.01:27,0,130	1/1:20,6:26:24.04:345,24,0	0/1:11,6:18:44.27:308,0,44	1/1:14,0:20:1.25:3,1,0	0/0:10,0:19:24.08:0,24,476	1/1:8,0:12:9.01:84,9,0	1/1:9,0:21:16.83:145,17,0	1/1:8,5:14:15.04:217,15,0	1/1:12,5:17:17.18:278,17,0	1/1:9,3:13:11.63:150,12,0	0/1:8,1:20:38.13:38,0,184	0/1:14,0:21:13.67:14,0,116	0/1:17,1:20:23.54:24,0,416	0/0:6,0:9:9.03:0,9,188	0/0:20,0:19:9.02:0,9,162	0/0:21,0:22:35.72:0,36,730	0/0:24,0:27:50.36:0,50,861	1/1:10,9:19:21.06:312,21,0	1/1:5,7:13:8.78:122,9,0	1/1:10,5:16:18.06:283,18,0	1/1:10,4:14:12.04:176,12,0	0/1:22,2:24:2.63:3,0,742	0/0:36,0:36:4.06:0,4,986	0/0:6,0:7:11.48:0,11,72
chr10	22301698	.	CACTCGCTCTCACATTTGCTCTCAG	C	8639.73	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=13.578;DP=733;FS=0.000;HRun=0;HaplotypeScore=390.9488;InbreedingCoeff=0.9615;MQ=61.27;MQ0=23;MQRankSum=-6.884;QD=47.21;ReadPosRankSum=0.391;VQSLOD=2.1821;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,135,11446	0/0:8,0:8:21.07:0,21,1746	0/0:27,0:13:18.05:0,18,577	0/0:43,0:27:16.32:0,16,909	0/0:27,0:27:59.20:0,59,3762	0/0:20,0:20:54.19:0,54,4552	0/0:31,0:31:82.21:0,82,6963	1/1:23,0:21:24.03:320,24,0	0/0:23,0:23:63.22:0,63,5487	1/1:2,23:25:53.79:1184,54,0	1/1:3,18:21:15.05:875,15,0	0/0:20,0:20:54.19:0,54,4518	0/0:26,0:26:63.22:0,63,5395	0/0:37,0:37:99:0,99,9480	1/1:6,25:30:18.06:1147,18,0	1/1:1,25:26:27.09:1623,27,0	0/0:23,0:23:60.18:0,60,4947	0/0:31,0:31:87.27:0,87,6835	0/0:19,0:16:30.10:0,30,2341	0/0:25,0:25:54.19:0,54,4761	0/0:48,0:48:99:0,123,9432	0/0:18,0:18:45.13:0,45,3227	0/0:20,0:20:45.15:0,45,3928	0/0:33,0:33:81.25:0,81,6317	0/0:16,0:16:36.10:0,36,2775	1/1:1,23:24:63.10:1602,63,0	1/1:3,26:29:26.88:1695,27,0	1/1:0,4:4:3.01:192,3,0
chr10	22302451	.	CA	C	3460.23	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=6.789;DP=721;FS=3.708;HRun=2;HaplotypeScore=77.6483;InbreedingCoeff=0.9963;MQ=86.64;MQ0=0;MQRankSum=-1.791;QD=38.02;ReadPosRankSum=-2.939;VQSLOD=3.0473;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:50:99:0,150,2200	0/0:6,0:6:18.06:0,18,268	0/0:23,0:23:66.21:0,66,948	0/0:26,0:26:53.50:0,54,1018	0/0:30,0:30:90.28:0,90,1307	0/0:33,0:33:99:0,99,1463	0/0:22,0:22:63.21:0,63,943	1/1:0,34:34:99:1311,102,0	0/0:27,0:27:81.27:0,81,1214	1/1:0,30:30:90.26:1137,90,0	1/1:0,27:27:78.25:1013,78,0	0/0:28,0:28:84.28:0,84,1259	0/0:25,0:25:75.25:0,75,1124	0/0:32,0:32:96.32:0,96,1419	0/0:20,0:20:60.20:0,60,882	0/0:32,0:32:93.30:0,93,1357	0/0:32,0:32:93.31:0,93,1390	0/0:11,0:11:33.11:0,33,495	0/0:17,0:17:48.16:0,48,719	0/0:30,0:30:87.29:0,87,1304	0/0:30,0:30:90.29:0,90,1328	0/0:26,0:26:75.23:0,75,1084	0/0:29,0:29:87.28:0,87,1283	0/0:17,0:17:51.17:0,51,764	0/0:25,0:25:72.24:0,72,1075	0/0:20,0:20:60.19:0,60,866	0/0:30,0:30:90.30:0,90,1336	0/0:8,0:8:24.08:0,24,360
chr10	22303640	.	T	TG	6924.92	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=-14.382;DP=710;FS=11.631;HRun=7;HaplotypeScore=68.2636;InbreedingCoeff=0.9285;MQ=80.26;MQ0=0;MQRankSum=-1.904;QD=27.37;ReadPosRankSum=0.081;VQSLOD=4.7639;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:48.07:0,48,463	0/0:15,0:15:39.06:0,39,377	0/0:23,0:22:45.35:0,45,509	0/1:17,0:17:9.23:9,0,235	0/0:35,0:35:88.01:0,88,859	1/1:2,28:30:75.23:906,75,0	1/1:2,21:23:45.14:544,45,0	0/0:36,0:36:93.13:0,93,890	0/0:24,0:24:63.07:0,63,602	0/0:25,0:25:60.08:0,60,578	0/0:29,0:29:75.10:0,75,718	1/1:1,19:20:54.17:652,54,0	1/1:2,23:25:60.18:725,60,0	1/1:2,26:28:75.23:906,75,0	0/0:25,0:25:72.10:0,72,691	0/0:26,0:26:66.09:0,66,637	0/0:11,0:11:30.03:0,30,283	0/0:19,0:19:48.04:0,48,456	0/0:23,0:23:53.57:0,54,501	0/0:35,0:35:99:0,99,936	0/0:29,0:29:81.12:0,81,782	1/1:5,28:33:81.18:960,81,0	1/1:3,20:23:56.96:665,57,0	1/1:2,25:27:72.22:870,72,0	1/1:1,26:27:57.17:689,57,0	0/0:24,0:24:63.09:0,63,605	0/0:46,0:46:99:0,123,1179	0/0:13,0:13:39.06:0,39,376
chr10	22305515	.	TC	T	505.59	PASS	AB=0.746;AC=26;AF=0.619;AN=42;BaseQRankSum=-2.460;DP=138;FS=2.580;HRun=3;HaplotypeScore=23.4124;InbreedingCoeff=0.1772;MQ=23.51;MQ0=35;MQRankSum=-2.378;QD=7.12;ReadPosRankSum=1.118;VQSLOD=0.8151;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:7:3.01:0,3,31	1/1:0,2:2:2.30:36,2,0	./.	./.	0/0:7,3:9:2.70:0,3,28	1/1:3,0:2:2.04:6,2,0	1/1:8,4:11:8.68:78,9,0	0/0:16,0:5:2.92:0,3,21	./.	0/1:1,2:3:30.08:62,0,30	./.	1/1:3,0:1:3.01:34,3,0	0/0:4,1:4:3.01:0,3,43	1/1:3,3:4:3.01:39,3,0	0/0:1,1:2:1.25:0,1,3	1/1:6,0:5:0.47:1,0,0	0/1:4,1:3:29.84:30,0,63	0/1:2,1:2:12.30:33,0,12	1/1:1,1:4:9.86:95,10,0	1/1:1,1:1:3.01:36,3,0	0/0:4,2:3:0:0,0,0	./.	./.	./.	0/1:3,1:2:0:0,0,0	1/1:7,0:5:11.93:123,12,0	1/1:4,0:4:3.37:17,3,0	1/1:4,1:1:3.01:32,3,0
chr10	22305516	.	C	CT	570.88	PASS	AB=0.958;AC=30;AF=0.652;AN=46;BaseQRankSum=-1.732;DP=160;FS=5.238;HRun=1;HaplotypeScore=36.4360;InbreedingCoeff=0.1975;MQ=23.96;MQ0=38;MQRankSum=-3.324;QD=6.14;ReadPosRankSum=0.390;VQSLOD=0.5298;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:7:3.01:0,3,32	1/1:4,0:3:2.30:36,2,0	./.	./.	0/0:11,0:10:2.70:0,3,29	1/1:4,1:4:4.06:11,4,0	1/1:12,3:14:8.61:76,9,0	0/0:18,0:6:3.84:0,4,23	1/1:4,0:3:3:26,3,0	0/1:3,0:3:32.01:62,0,32	./.	1/1:1,2:1:3.01:34,3,0	0/0:5,0:4:3.01:0,3,42	1/1:7,0:5:3:35,3,0	0/0:2,0:2:1.24:0,1,3	1/1:5,4:8:3.12:21,3,0	0/1:7,0:5:33.89:34,0,69	0/1:3,0:2:10.51:11,0,25	1/1:5,0:4:11.96:116,12,0	1/1:2,0:1:3.01:36,3,0	0/0:7,0:3:0:0,0,0	./.	0/1:4,1:3:0:0,0,0	./.	1/1:5,0:3:0.47:1,0,0	1/1:7,0:5:11.93:123,12,0	1/1:4,0:4:5.90:41,6,0	1/1:5,0:1:3.01:32,3,0
chr10	22305517	.	CT	C	569.95	PASS	AB=0.968;AC=27;AF=0.563;AN=48;BaseQRankSum=-2.782;DP=171;FS=3.507;HRun=1;HaplotypeScore=40.3613;InbreedingCoeff=0.1680;MQ=24.52;MQ0=38;MQRankSum=-3.255;QD=5.43;ReadPosRankSum=1.969;VQSLOD=0.8950;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:10,6:12:3.69:0,4,38	1/1:4,0:3:2.51:19,3,0	./.	./.	0/0:8,2:9:2.70:0,3,30	1/1:5,0:4:2.51:7,3,0	1/1:14,1:14:9.21:127,9,0	0/1:16,1:5:10.49:10,0,38	0/0:6,0:5:2.92:0,3,18	0/1:3,0:3:37.63:72,0,38	./.	1/1:4,0:2:2.86:34,3,0	0/0:5,0:4:1.27:0,1,42	1/1:6,0:4:3.42:21,3,0	0/1:2,0:2:0:0,0,0	0/0:9,0:8:3.91:0,4,22	0/1:9,0:7:22.21:22,0,74	0/1:4,0:3:13.97:14,0,33	1/1:5,0:4:12.01:131,12,0	1/1:2,0:1:3.01:36,3,0	0/0:8,0:4:1.82:0,2,5	./.	0/0:5,0:3:0.47:0,0,1	0/1:7,0:5:0:0,0,0	0/1:4,1:3:0:0,0,0	1/1:4,5:6:13.85:139,14,0	1/1:0,3:3:3.01:37,3,0	1/1:5,0:1:3:26,3,0
chr10	22305564	.	TCACACACACA	T	643.33	PASS	AB=0.688;AC=17;AF=0.472;AN=36;BaseQRankSum=4.373;DP=260;FS=3.154;HRun=0;HaplotypeScore=76.5784;InbreedingCoeff=0.5422;MQ=29.13;MQ0=30;MQRankSum=-1.003;QD=6.50;ReadPosRankSum=0.180;VQSLOD=1.5924;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:12:3.01:52,3,0	0/0:4,0:3:2.69:0,3,127	0/0:1,0:1:3.01:0,3,86	./.	0/1:6,0:11:0:0,0,0	./.	1/1:22,2:21:6.02:140,6,0	./.	0/0:8,0:8:3.01:0,3,146	0/0:13,0:12:19.03:0,19,244	./.	./.	./.	1/1:7,1:7:0.86:2,1,0	1/1:3,0:4:6.02:140,6,0	1/1:6,0:11:11.99:282,12,0	0/0:20,0:17:21:0,21,598	0/0:6,0:5:12.04:0,12,389	0/0:10,0:7:15.05:0,15,459	0/0:8,0:8:9.03:0,9,349	0/0:13,0:11:2.97:0,3,103	./.	1/1:12,2:14:0.24:0,0,0	./.	./.	./.	1/1:5,0:4:3.01:75,3,0	1/1:2,0:1:3.01:75,3,0
chr10	22307812	.	TCC	T	6909.96	PASS	AB=0.548;AC=27;AF=0.482;AN=56;BaseQRankSum=-6.404;DP=504;FS=14.167;HRun=9;HaplotypeScore=88.8238;InbreedingCoeff=0.9116;MQ=80.11;MQ0=3;MQRankSum=-1.658;QD=28.32;ReadPosRankSum=3.134;VQSLOD=3.5121;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,18:18:48.14:559,48,0	1/1:0,8:8:21.06:245,21,0	0/0:25,0:17:38.18:0,38,450	0/0:28,0:23:35.86:0,36,378	1/1:1,20:21:57.17:663,57,0	0/0:3,0:19:33.44:0,33,145	0/0:1,0:11:17.47:0,17,61	0/0:22,0:22:30.10:0,30,491	1/1:3,19:22:51.14:594,51,0	0/0:13,0:13:33.10:0,33,499	0/0:16,0:16:45.15:0,45,727	0/0:1,0:11:17.47:0,17,62	0/0:3,0:23:47.41:0,47,167	0/0:2,0:16:27.82:0,28,111	1/1:1,28:29:78.23:909,78,0	1/1:1,16:17:39.11:454,39,0	1/1:1,8:9:18.05:210,18,0	1/1:2,4:6:12.03:140,12,0	1/1:3,18:21:54.15:628,54,0	1/1:2,22:23:57.16:660,57,0	1/1:2,10:12:27.07:315,27,0	0/0:0,0:21:46.39:0,46,182	0/0:1,0:16:30.73:0,31,112	0/0:1,0:19:32.44:0,32,114	0/0:2,0:20:32.94:0,33,131	0/1:4,19:23:31.92:625,0,32	1/1:1,27:28:69.20:803,69,0	1/1:0,5:5:9.03:105,9,0
chr10	22308531	.	CCTT	C	2844.31	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.901;DP=619;FS=2.311;HRun=0;HaplotypeScore=87.2863;InbreedingCoeff=0.9955;MQ=81.33;MQ0=0;MQRankSum=-5.525;QD=41.83;ReadPosRankSum=2.139;VQSLOD=5.1963;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:60.17:0,60,1199	0/0:7,0:7:21.07:0,21,464	0/0:15,0:15:45.15:0,45,980	0/0:22,0:22:60.17:0,60,1205	0/0:32,0:32:90.31:0,90,1987	0/0:30,0:30:81.28:0,81,1788	0/0:15,0:15:45.15:0,45,992	0/0:43,0:43:99:0,117,2568	0/0:15,0:15:42.14:0,42,927	0/0:28,0:28:78.27:0,78,1723	0/0:23,0:23:60.17:0,60,1264	0/0:16,0:16:48.16:0,48,1035	0/0:24,0:24:66.23:0,66,1435	0/0:28,0:28:81.26:0,81,1725	0/0:23,0:23:69.24:0,69,1523	0/0:21,0:21:63.21:0,63,1352	0/0:39,0:39:99:0,114,2501	0/0:6,0:6:18.03:0,18,338	0/0:13,0:13:39.13:0,39,848	0/0:30,0:30:87.29:0,87,1862	0/0:22,0:22:60.21:0,60,1287	0/0:17,0:17:51.16:0,51,1071	0/0:18,0:18:54.19:0,54,1192	0/0:16,0:16:48.16:0,48,1017	0/0:27,0:27:72.25:0,72,1588	1/1:1,27:28:81.28:1301,81,0	1/1:4,25:28:72.25:1156,72,0	1/1:0,11:11:33.11:530,33,0
chr10	22308654	.	T	TA	6792.97	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-13.678;DP=540;FS=0.708;HRun=4;HaplotypeScore=48.9090;InbreedingCoeff=0.9919;MQ=84.48;MQ0=0;MQRankSum=-0.313;QD=35.75;ReadPosRankSum=0.184;VQSLOD=4.9653;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:51.14:0,51,578	0/0:11,0:11:33.07:0,33,362	0/0:20,0:20:39.10:0,39,433	0/0:13,0:13:37.64:0,38,397	1/1:6,26:32:81.22:1062,81,0	0/0:21,0:21:60.14:0,60,660	0/0:14,0:14:39.09:0,39,432	1/1:3,33:36:99:1257,99,0	0/0:18,0:18:45.11:0,45,501	1/1:1,16:18:51.16:677,51,0	1/1:1,22:23:66.09:857,66,0	0/0:21,0:21:57.12:0,57,624	0/0:26,0:26:69.13:0,69,742	0/0:22,0:22:60.13:0,60,666	1/1:1,16:17:48.16:657,48,0	1/1:0,14:14:39.13:533,39,0	0/0:23,0:23:60.17:0,60,680	0/0:7,0:7:18.05:0,18,204	0/0:17,0:17:39.10:0,39,434	0/0:32,0:32:93.22:0,93,1026	0/0:8,0:8:21.06:0,21,238	0/0:14,0:14:39.11:0,39,442	0/0:29,0:29:81.20:0,81,899	0/0:7,0:7:18.05:0,18,204	0/0:27,0:27:78.21:0,78,875	1/1:1,18:19:54.11:684,54,0	1/1:2,25:27:66.22:902,66,0	1/1:0,4:4:12.04:164,12,0
chr10	22310365	.	GC	G	3992.47	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=8.274;DP=501;FS=3.079;HRun=1;HaplotypeScore=53.1123;InbreedingCoeff=0.9661;MQ=82.26;MQ0=0;MQRankSum=-1.085;QD=40.33;ReadPosRankSum=0.110;VQSLOD=4.0482;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:26:75.23:0,75,1168	1/1:0,7:7:18.06:252,18,0	0/0:14,0:14:42.08:0,42,550	0/0:14,0:14:41.62:0,42,586	0/0:38,0:38:99:0,114,1776	0/0:28,0:28:84.29:0,84,1338	0/0:12,0:12:33.11:0,33,517	0/0:21,0:21:63.20:0,63,966	1/1:0,14:14:42.14:587,42,0	0/0:19,0:19:57.19:0,57,911	0/0:21,0:21:63.21:0,63,1005	0/0:13,0:13:39.13:0,39,623	0/0:21,0:21:60.20:0,60,958	0/0:19,0:19:51.15:0,51,766	0/0:25,0:25:75.21:0,75,1128	0/0:11,0:11:33.11:0,33,528	1/1:0,20:20:60.20:837,60,0	1/1:0,7:7:21.07:293,21,0	1/1:0,12:12:36.10:472,36,0	1/1:0,28:28:81.27:1133,81,0	1/1:0,11:11:30.10:420,30,0	0/0:17,0:17:51.17:0,51,815	0/0:21,0:21:63.20:0,63,974	0/0:9,0:9:27.09:0,27,431	0/0:28,0:28:84.28:0,84,1318	0/0:17,0:17:51.17:0,51,815	0/0:26,0:26:78.25:0,78,1223	0/0:1,0:1:3.01:0,3,48
chr10	22310517	.	C	CCA	747.09	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=1.739;DP=469;FS=5.170;HRun=0;HaplotypeScore=107.9250;InbreedingCoeff=0.5719;MQ=73.65;MQ0=4;MQRankSum=-1.989;QD=12.88;ReadPosRankSum=-1.782;VQSLOD=3.0762;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:81:0,81,1093	0/0:9,0:9:24:0,24,307	0/0:38,0:22:50.10:0,50,568	0/1:34,0:22:13.95:14,0,260	1/1:9,15:24:59.89:837,60,0	0/0:11,0:11:15.04:0,15,202	0/0:12,0:12:33.05:0,33,465	0/0:11,0:11:33.07:0,33,432	0/0:12,0:11:27.02:0,27,354	0/0:21,0:21:63.08:0,63,801	0/0:17,0:17:47.71:0,48,588	0/0:12,0:12:14.91:0,15,152	0/0:13,0:13:20.49:0,20,255	0/0:16,0:16:26.76:0,27,291	0/0:17,0:17:51.08:0,51,694	0/0:15,0:15:45.06:0,45,601	0/0:19,0:18:42.89:0,43,550	0/0:6,0:6:18.02:0,18,242	0/0:11,0:11:33.06:0,33,445	0/0:12,0:12:29.89:0,30,390	0/0:20,0:20:42.05:0,42,520	0/0:14,0:14:39.05:0,39,533	0/0:14,0:14:2.67:0,3,11	0/0:18,0:18:20.77:0,21,182	0/0:19,0:18:26.74:0,27,329	0/0:17,0:17:51.06:0,51,672	0/0:23,0:23:62.91:0,63,784	0/0:7,0:7:21.07:0,21,312
chr10	22310529	.	GGGGTGT	G	4503.06	PASS	AB=1.000;AC=24;AF=0.429;AN=56;BaseQRankSum=2.495;DP=445;FS=7.108;HRun=0;HaplotypeScore=114.8842;InbreedingCoeff=0.6755;MQ=69.18;MQ0=5;MQRankSum=-3.311;QD=19.66;ReadPosRankSum=1.011;VQSLOD=3.5460;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:31,0:31:99:253,0,744	0/0:8,0:8:20.99:0,21,303	0/0:31,0:15:20.33:0,20,274	0/0:24,0:12:20.56:0,21,159	1/1:7,0:20:35.96:454,36,0	1/1:0,9:11:9.03:198,9,0	1/1:10,2:13:32.94:387,33,0	0/0:10,0:10:27.05:0,27,419	0/0:12,0:11:26.99:0,27,479	0/0:18,0:18:51.12:0,51,1030	0/0:14,0:14:35.07:0,35,796	1/1:0,11:11:9.02:218,9,0	1/1:1,13:14:14.03:309,14,0	1/1:0,16:17:30.10:705,30,0	0/0:18,0:18:54.02:0,54,898	0/0:14,0:14:36.09:0,36,938	0/0:16,0:15:39.23:0,39,470	0/0:6,0:6:18.01:0,18,334	0/0:12,0:12:35.46:0,35,542	0/0:14,0:14:29.19:0,29,307	0/0:19,0:19:29.19:0,29,460	1/1:8,1:12:32.60:412,33,0	1/1:0,15:15:21.07:505,21,0	1/1:0,16:16:9.03:218,9,0	1/1:1,12:15:23.83:433,24,0	0/1:23,0:23:99:105,0,643	0/1:20,0:21:99:217,0,379	0/1:9,0:9:87.74:88,0,183
chr10	22310531	.	G	GGTGT	2709.75	PASS	AB=0.987;AC=30;AF=0.556;AN=54;BaseQRankSum=-3.674;DP=478;FS=9.595;HRun=0;HaplotypeScore=136.3656;InbreedingCoeff=0.5733;MQ=65.14;MQ0=6;MQRankSum=3.882;QD=8.63;ReadPosRankSum=-2.268;VQSLOD=2.1183;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:35,0:35:13.92:14,0,289	1/1:5,0:7:6.02:104,6,0	1/1:32,0:16:1.25:3,1,0	./.	0/0:19,0:19:18.02:0,18,167	0/0:12,0:12:8.80:0,9,83	0/1:13,0:13:10.35:10,0,71	1/1:13,0:13:11.84:94,12,0	1/1:14,0:15:5.68:104,6,0	1/1:12,7:24:41.66:557,42,0	1/1:8,8:18:21.98:360,22,0	0/0:11,0:11:9.01:0,9,84	0/0:13,0:13:11.44:0,11,111	0/0:17,0:17:30.03:0,30,278	0/1:17,0:18:17.17:17,0,38	0/0:13,0:13:18.06:0,18,274	1/1:15,0:16:6.46:70,6,0	1/1:11,0:10:13.29:183,13,0	1/1:15,0:15:10.28:160,10,0	1/1:18,0:22:15.05:260,15,0	1/1:19,0:19:5.99:74,6,0	0/0:10,0:10:12.01:0,12,112	0/0:15,0:15:21.02:0,21,195	0/0:17,0:17:9:0,9,78	0/0:16,0:15:17.74:0,18,167	1/1:23,0:23:27.06:382,27,0	1/1:20,0:23:30.02:454,30,0	0/1:8,0:8:29.05:57,0,29
chr10	22310569	.	T	TGT	1198.99	PASS	AB=1.000;AC=29;AF=0.537;AN=54;BaseQRankSum=-4.709;DP=419;FS=6.192;HRun=0;HaplotypeScore=99.8823;InbreedingCoeff=0.4934;MQ=67.69;MQ0=3;MQRankSum=5.428;QD=4.74;ReadPosRankSum=-1.652;VQSLOD=2.1763;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:26:21.44:21,0,133	1/1:3,0:3:6:52,6,0	1/1:21,0:13:0.89:2,1,0	0/1:27,0:23:0:0,0,0	0/0:23,0:23:17.04:0,17,84	0/0:12,0:12:8.52:0,9,42	0/1:13,0:13:10.84:11,0,30	./.	1/1:10,0:10:6:52,6,0	1/1:17,0:17:24.86:233,25,0	1/1:20,0:20:21.44:211,21,0	0/0:13,0:13:8.52:0,9,42	0/0:16,0:16:11.20:0,11,56	0/0:15,0:15:28.41:0,28,139	0/1:11,0:11:21.04:112,0,21	0/0:12,0:12:18.05:0,18,198	1/1:15,0:16:6.25:36,6,0	1/1:8,0:9:3.89:28,4,0	1/1:11,0:12:3:26,3,0	1/1:15,0:15:3:26,3,0	1/1:8,1:13:5.98:48,6,0	0/0:10,0:10:11.36:0,11,56	0/0:16,0:16:19.89:0,20,98	0/0:16,0:16:9.41:0,9,43	0/0:15,0:15:17.04:0,17,84	1/1:17,0:17:24.02:248,24,0	1/1:16,0:18:26.96:240,27,0	0/1:4,0:4:12.52:33,0,13
chr10	22311267	.	GA	G	6676.52	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=10.733;DP=651;FS=1.912;HRun=10;HaplotypeScore=63.6441;InbreedingCoeff=0.9603;MQ=58.89;MQ0=10;MQRankSum=1.452;QD=18.97;ReadPosRankSum=2.273;VQSLOD=5.7524;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:54.09:0,54,575	0/0:12,0:12:30.08:0,30,332	0/0:31,0:15:5.36:0,5,282	0/0:19,0:9:21.02:0,21,213	0/0:34,0:33:90.22:0,90,981	1/1:1,25:26:62.98:547,63,0	1/1:4,11:12:4.18:163,4,0	1/1:5,18:19:41.95:360,42,0	0/0:17,0:18:48.11:0,48,517	1/1:7,18:26:49.98:418,50,0	1/1:5,26:31:74.01:631,74,0	1/1:1,14:15:38.99:338,39,0	1/1:1,19:20:50.99:443,51,0	1/1:2,23:25:59.99:521,60,0	0/0:18,0:18:36.09:0,36,390	0/0:15,0:15:42.11:0,42,464	0/0:43,0:43:96.26:0,96,1062	0/0:15,0:13:24.95:0,25,267	0/0:19,0:15:39.09:0,39,422	0/0:36,0:35:99:0,99,1080	0/0:16,0:16:20.68:0,21,301	1/1:5,15:20:44.98:391,45,0	1/1:5,30:35:71.98:625,72,0	1/1:1,15:17:41.02:345,41,0	1/1:6,19:25:59.97:521,60,0	1/1:4,19:23:56.96:490,57,0	1/1:5,33:38:86.98:755,87,0	1/1:6,5:8:14.99:130,15,0
chr10	22312702	.	T	TC	7712.76	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=-6.623;DP=702;FS=0.000;HRun=1;HaplotypeScore=66.7689;InbreedingCoeff=0.9152;MQ=64.23;MQ0=1;MQRankSum=0.124;QD=39.76;ReadPosRankSum=-0.980;VQSLOD=4.9233;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:43:99:0,129,1627	0/0:11,0:11:33.11:0,33,429	0/0:19,0:18:54.14:0,54,668	0/0:19,0:19:51.12:0,51,625	1/1:0,25:25:66.22:989,66,0	0/0:24,0:24:69.22:0,69,896	0/0:15,0:15:45.15:0,45,584	1/1:3,35:38:99:1572,105,0	0/0:26,0:26:72.22:0,72,921	1/1:2,26:28:81.27:1202,81,0	1/1:0,21:22:63.21:931,63,0	0/0:21,0:21:63.19:0,63,803	0/0:32,0:32:93.28:0,93,1179	0/0:17,0:17:48.16:0,48,623	0/0:33,0:33:90.28:0,90,1153	0/0:28,0:28:84.27:0,84,1091	0/0:19,0:19:54.18:0,54,700	0/1:11,0:11:8.05:8,0,356	0/0:19,0:19:51.17:0,51,662	0/0:36,0:36:99:0,108,1374	0/0:52,0:51:99:0,150,1948	0/0:13,0:13:39.11:0,39,492	0/0:25,0:25:75.23:0,75,957	0/0:29,0:29:84.27:0,84,1090	0/0:27,0:27:81.26:0,81,1052	1/1:0,39:39:99:1752,117,0	1/1:0,27:27:72.24:1079,72,0	1/1:0,4:4:12.04:180,12,0
chr10	22313447	.	C	CAA	1913.68	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-6.016;DP=452;FS=13.750;HRun=8;HaplotypeScore=54.8879;InbreedingCoeff=0.9230;MQ=76.25;MQ0=0;MQRankSum=-2.038;QD=29.90;ReadPosRankSum=0.115;VQSLOD=1.9648;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:60.14:0,60,658	0/0:5,0:5:15.04:0,15,167	0/0:13,0:13:27.02:0,27,282	0/0:7,0:7:11.99:0,12,119	0/0:0,0:15:37.95:0,38,163	0/0:18,0:19:50.87:0,51,547	0/0:11,0:11:33.09:0,33,368	0/0:36,0:36:87.16:0,87,941	0/0:14,0:14:42.10:0,42,459	0/0:20,0:20:54.14:0,54,601	0/0:28,0:28:75.19:0,75,836	0/0:14,0:14:39.09:0,39,426	0/0:16,0:16:36.08:0,36,401	0/0:17,0:17:48.12:0,48,535	0/0:13,0:14:32.82:0,33,346	0/0:15,0:15:45.12:0,45,502	0/0:14,0:14:39.06:0,39,421	0/0:16,0:16:30.07:0,30,334	0/0:16,0:16:42.11:0,42,468	0/0:20,0:20:54.13:0,54,602	0/0:2,0:2:6.02:0,6,67	0/0:9,0:9:27.07:0,27,301	0/0:17,0:17:51.14:0,51,568	0/0:10,0:10:27.07:0,27,301	0/0:19,0:19:42.10:0,42,468	1/1:2,19:24:60.15:883,60,0	1/1:5,21:28:62.15:895,62,0	1/1:2,10:12:8.49:272,8,0
chr10	22314542	.	ATG	A	3135.32	PASS	AB=0.824;AC=24;AF=0.444;AN=54;BaseQRankSum=-1.405;DP=698;FS=2.934;HRun=0;HaplotypeScore=142.7746;InbreedingCoeff=0.3454;MQ=61.94;MQ0=9;MQRankSum=2.461;QD=7.11;ReadPosRankSum=0.333;VQSLOD=3.4032;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:9.03:0,9,126	0/0:7,0:13:17.99:0,18,155	0/0:35,0:23:3.01:0,3,44	0/0:27,0:16:0:0,0,0	0/0:19,0:30:29.99:0,30,277	0/1:13,12:26:15.53:229,0,16	1/1:13,5:22:44.45:422,44,0	0/1:21,5:27:26.88:123,0,27	0/0:19,0:24:17.93:0,18,154	0/1:29,6:37:57.06:225,0,57	1/1:11,6:18:20.89:214,21,0	1/1:23,8:32:29.40:291,29,0	1/1:17,9:28:35.60:420,36,0	1/1:22,10:34:41.57:408,42,0	0/1:37,3:40:2.66:3,0,943	0/1:24,5:29:97.43:97,0,279	0/0:17,0:20:26.09:0,26,241	0/0:10,0:15:23.95:0,24,216	0/0:21,0:22:5.99:0,6,49	0/0:14,0:26:5.43:0,5,51	0/0:11,0:20:11.99:0,12,104	1/1:17,7:24:15.51:168,16,0	1/1:16,7:24:20.89:214,21,0	1/1:5,7:12:11.99:120,12,0	0/1:13,12:27:6.78:304,0,7	0/1:32,2:34:70.57:71,0,368	0/1:22,2:23:13.10:13,0,276	./.
chr10	22314607	.	A	ATG	997.89	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=5.003;DP=490;FS=2.349;HRun=0;HaplotypeScore=196.3385;InbreedingCoeff=0.3314;MQ=45.42;MQ0=10;MQRankSum=-3.216;QD=7.03;ReadPosRankSum=2.711;VQSLOD=3.5432;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:14:2.20:17,2,0	0/0:8,0:8:2.68:0,3,11	0/0:23,0:6:6:0,6,56	0/0:25,0:10:9.49:0,9,101	0/0:20,1:21:8.28:0,8,98	0/0:16,0:16:14.65:0,15,199	0/0:20,0:18:30.02:0,30,331	0/0:42,0:42:77.39:0,77,851	0/0:10,0:10:6.36:0,6,79	0/0:22,0:24:48.76:0,49,688	0/0:13,0:12:10.44:0,10,123	0/0:23,0:22:11.94:0,12,130	0/1:19,0:18:14.35:14,0,216	0/0:17,0:17:15.60:0,16,137	0/1:28,0:28:5.26:5,0,275	0/0:20,0:19:8.18:0,8,88	0/1:11,0:11:16.82:17,0,122	0/1:8,0:8:1.97:2,0,157	0/0:11,0:9:18.06:0,18,239	0/1:11,0:11:30.29:30,0,70	0/0:20,0:19:6.16:0,6,47	0/0:7,0:7:3.01:0,3,39	0/0:14,0:14:5.99:0,6,65	0/0:9,0:9:3.01:0,3,40	0/0:22,0:22:21.25:0,21,196	1/1:19,3:19:48.15:607,48,0	1/1:19,3:22:20.86:294,21,0	1/1:6,1:7:12.51:169,13,0
chr10	22314611	.	G	GTA	1291.75	PASS	AB=0.976;AC=8;AF=0.143;AN=56;BaseQRankSum=3.737;DP=451;FS=13.194;HRun=0;HaplotypeScore=188.9647;InbreedingCoeff=0.4023;MQ=45.69;MQ0=9;MQRankSum=-4.764;QD=11.85;ReadPosRankSum=2.277;VQSLOD=2.5482;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:3.61:0,4,18	0/0:8,0:8:2.93:0,3,30	0/0:17,0:3:6.02:0,6,86	0/0:15,0:8:9.45:0,9,131	0/0:19,0:19:14.84:0,15,176	0/0:15,0:15:14.18:0,14,228	0/0:18,0:16:32.96:0,33,469	0/1:40,0:38:70.19:70,0,981	0/0:10,0:10:6.06:0,6,91	0/0:24,0:24:14.28:0,14,866	0/0:14,0:12:10.40:0,10,140	0/0:18,0:17:11.82:0,12,176	0/0:19,0:18:26.95:0,27,376	0/0:17,0:17:26.25:0,26,281	0/0:25,1:26:31.17:0,31,408	0/1:19,1:19:8.35:8,0,112	0/0:11,0:11:7.32:0,7,213	0/0:8,0:8:18.03:0,18,244	0/0:11,0:9:24.05:0,24,323	0/0:11,0:11:9.89:0,10,129	0/0:19,0:18:8.15:0,8,97	0/0:7,0:7:5.89:0,6,70	0/0:13,0:13:5.79:0,6,90	0/0:8,0:8:3.01:0,3,46	0/0:19,0:19:21.69:0,22,299	1/1:7,14:18:6.25:806,6,0	1/1:7,14:21:5.20:333,5,0	1/1:1,5:7:12.51:205,13,0
chr10	22314778	.	A	AGT	51.58	PASS	AB=0.884;AC=7;AF=0.125;AN=56;BaseQRankSum=5.070;DP=493;FS=12.218;HRun=0;HaplotypeScore=206.3171;InbreedingCoeff=0.0697;MQ=41.38;MQ0=2;MQRankSum=-2.750;QD=0.46;ReadPosRankSum=-0.436;VQSLOD=1.8596;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:8:11.05:0,11,107	0/0:12,0:12:14.30:0,14,186	0/0:22,0:11:13.73:0,14,345	0/0:19,0:10:11.75:0,12,253	0/1:5,3:8:0.21:0,0,1	0/0:9,0:9:2.87:0,3,42	0/0:19,0:19:28.41:0,28,358	0/0:28,1:21:12.51:0,13,266	0/0:15,2:17:1.77:0,2,40	0/0:36,0:36:59.71:0,60,586	0/0:17,0:17:4.77:0,5,64	0/0:30,0:30:21.24:0,21,331	0/0:26,0:26:20.86:0,21,274	0/0:23,0:23:7.05:0,7,123	0/0:20,1:21:21.42:0,21,291	0/1:35,0:36:24.79:25,0,230	0/0:7,0:8:4.67:0,5,27	0/0:7,0:7:14.94:0,15,195	0/1:11,1:12:13.54:14,0,375	0/0:12,0:12:14.03:0,14,208	0/1:18,2:20:6.98:7,0,113	0/0:15,0:15:3.70:0,4,81	1/1:10,0:10:0.47:2,0,0	0/0:10,0:9:0.43:0,0,1	0/0:11,0:11:9.09:0,9,126	0/0:26,0:24:69.15:0,69,853	0/1:22,2:20:99:106,0,268	0/0:5,0:5:8.99:0,9,99
chr10	22314794	.	A	ATG	224.21	PASS	AB=0.924;AC=7;AF=0.125;AN=56;BaseQRankSum=8.516;DP=753;FS=0.729;HRun=0;HaplotypeScore=292.7377;InbreedingCoeff=0.0686;MQ=44.62;MQ0=3;MQRankSum=-6.377;QD=1.30;ReadPosRankSum=-1.006;VQSLOD=1.8741;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:17.01:0,17,187	0/0:13,0:13:23.38:0,23,328	0/0:43,2:22:46.55:0,47,752	0/0:39,0:24:65.65:0,66,795	1/1:14,5:19:12.84:156,13,0	0/0:15,0:15:2.87:0,3,41	0/0:29,0:29:46.22:0,46,640	0/0:51,3:45:62.43:0,62,1401	0/1:24,2:26:17.56:18,0,378	0/1:50,3:52:14.24:14,0,1491	0/0:21,2:23:22.37:0,22,328	0/0:39,0:39:39.17:0,39,480	0/0:35,0:35:50.96:0,51,764	0/0:31,0:31:9.70:0,10,161	0/0:26,1:27:36.46:0,36,480	0/0:44,0:45:6.99:0,7,701	0/1:11,1:12:54.19:54,0,75	0/0:16,0:16:6.55:0,7,383	0/0:18,1:19:1.10:0,1,625	0/0:16,0:16:20.02:0,20,255	0/1:26,3:28:52.08:52,0,412	0/0:25,0:25:12.61:0,13,188	0/0:14,0:14:7.72:0,8,118	0/0:16,0:14:3.42:0,3,24	0/0:15,1:16:9.09:0,9,125	0/0:38,0:36:48.43:0,48,1028	0/1:29,0:27:60.65:61,0,395	0/0:9,0:9:12.04:0,12,162
chr10	22314810	.	A	AGT	661.74	PASS	AB=0.816;AC=3;AF=0.054;AN=56;BaseQRankSum=6.352;DP=1013;FS=0.000;HRun=0;HaplotypeScore=379.0103;InbreedingCoeff=-0.0704;MQ=49.31;MQ0=2;MQRankSum=-8.366;QD=5.91;ReadPosRankSum=0.225;VQSLOD=1.8982;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,1:21:32.11:0,32,384	0/0:17,0:17:35.38:0,35,466	0/0:59,0:29:75.70:0,76,988	0/0:61,0:38:78.08:0,78,999	0/0:18,10:26:24.44:0,24,285	0/0:21,0:21:8.89:0,9,126	0/0:36,0:36:49.25:0,49,712	0/0:59,0:49:99:0,108,1495	0/0:31,0:31:40.70:0,41,542	0/0:62,0:60:99:0,118,1698	0/0:30,0:30:46.44:0,46,653	0/0:53,0:54:40.01:0,40,1007	0/0:56,0:55:99:0,101,1452	0/0:50,0:50:48.79:0,49,665	0/0:32,2:34:57.54:0,58,801	0/0:63,0:62:99:0,102,1431	0/0:14,0:14:0.37:0,0,157	0/0:19,0:19:37.73:0,38,626	0/0:25,0:23:69.21:0,69,924	0/0:25,0:25:50.15:0,50,710	0/0:38,3:40:22.06:0,22,869	0/0:30,0:30:18.33:0,18,274	0/0:21,0:21:31.82:0,32,471	0/0:20,1:19:12.47:0,12,168	0/0:21,0:21:21.09:0,21,272	0/1:45,10:50:99:490,0,981	0/1:39,7:40:99:145,0,563	0/1:7,4:11:99:126,0,186
chr10	22314840	.	GCA	G	376.35	PASS	AB=0.858;AC=5;AF=0.089;AN=56;BaseQRankSum=8.929;DP=1126;FS=7.641;HRun=0;HaplotypeScore=409.3702;InbreedingCoeff=-0.0922;MQ=50.72;MQ0=13;MQRankSum=-8.273;QD=2.11;ReadPosRankSum=-4.072;VQSLOD=0.4346;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:50.83:0,51,1194	0/0:19,0:19:44.47:0,44,912	0/0:55,0:23:67.77:0,68,1253	0/0:74,1:33:45.58:0,46,1008	0/1:32,5:34:3.74:4,0,451	0/0:26,1:27:10.37:0,10,914	0/0:40,0:40:83.05:0,83,1578	0/0:49,0:38:76.83:0,77,925	0/0:37,0:37:90:0,90,1802	0/0:43,0:41:47.32:0,47,899	0/0:32,0:32:73.39:0,73,794	0/0:61,0:61:99:0,112,2203	0/0:68,0:67:99:0,150,2954	0/0:53,1:54:99:0,117,2368	0/0:52,2:54:99:0,123,2455	0/0:64,2:64:99:0,135,2765	0/0:15,0:15:25.21:0,25,651	0/1:21,0:21:11.86:12,0,911	0/0:16,0:15:45.15:0,45,905	0/0:32,2:34:51.22:0,51,1715	0/0:49,0:49:92.03:0,92,2400	0/0:36,0:36:71.20:0,71,1412	0/0:27,0:27:52.57:0,53,1068	0/0:34,0:32:63.06:0,63,1234	0/0:27,0:27:51.17:0,51,1035	0/1:43,6:44:58.94:59,0,816	0/1:41,16:48:99:278,0,632	0/1:9,5:13:88.77:134,0,89
chr10	22314846	.	AGT	A	3562.35	PASS	AB=0.941;AC=5;AF=0.089;AN=56;BaseQRankSum=-1.198;DP=1160;FS=0.374;HRun=0;HaplotypeScore=401.1521;InbreedingCoeff=0.7036;MQ=52.02;MQ0=14;MQRankSum=1.707;QD=25.81;ReadPosRankSum=2.234;VQSLOD=2.4743;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:59.82:0,60,1135	0/0:18,0:18:44.28:0,44,468	0/0:56,0:22:38.63:0,39,534	0/0:73,0:32:0.66:0,1,404	0/0:40,0:37:50.34:0,50,1056	0/0:28,0:29:46.10:0,46,886	0/0:37,0:37:59.93:0,60,967	0/0:49,0:38:83.97:0,84,1338	0/0:34,1:35:89.79:0,90,937	0/0:46,0:44:99:0,105,1780	0/0:31,0:31:81.28:0,81,1367	0/0:58,0:58:99:0,119,1943	0/0:67,1:67:99:0,165,2776	0/0:59,0:59:99:0,123,2060	1/1:7,48:55:99:1616,127,0	1/1:10,57:64:99:1922,151,0	0/0:16,0:16:32.60:0,33,490	0/0:23,0:23:51.26:0,51,680	0/0:15,0:14:33.07:0,33,346	0/0:37,0:37:87.65:0,88,931	0/0:53,0:53:99:0,129,1323	0/0:36,0:36:74.11:0,74,1219	0/0:28,0:28:61.50:0,61,1032	0/0:34,2:34:68.77:0,69,1161	0/0:29,0:29:57.18:0,57,939	0/0:53,0:47:69.33:0,69,1692	0/0:56,2:48:33.01:0,33,1352	0/1:15,1:15:24.69:25,0,325
chr10	22314864	.	ATGTG	A	13443.25	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-11.006;DP=1229;FS=13.856;HRun=0;HaplotypeScore=394.5030;InbreedingCoeff=0.9805;MQ=49.74;MQ0=15;MQRankSum=3.543;QD=33.61;ReadPosRankSum=1.647;VQSLOD=4.0722;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:86.98:0,87,1942	0/0:18,0:18:41.79:0,42,919	0/0:54,0:14:18.76:0,19,358	0/0:75,0:28:46.44:0,46,754	0/0:40,0:37:59.53:0,60,908	1/1:6,22:28:18.84:730,19,0	1/1:6,28:34:60.20:975,60,0	0/0:20,0:40:95.33:0,95,532	0/0:36,0:36:90.27:0,90,2211	0/0:18,0:46:99:0,109,595	0/0:10,0:34:78.15:0,78,384	1/1:11,50:60:44.68:1869,45,0	1/1:19,49:67:99:3103,186,0	1/1:6,57:63:99:2334,138,0	0/0:59,0:59:99:0,156,3689	0/0:71,0:68:99:0,177,4212	0/0:19,0:19:24.07:0,24,1001	0/0:27,0:27:43.74:0,44,1452	0/0:21,0:19:51.17:0,51,1205	0/0:42,0:42:99:0,100,2474	0/0:73,0:73:99:0,193,4541	1/1:6,35:41:64.21:1167,64,0	1/1:8,24:32:75.63:1189,76,0	1/1:8,33:39:78.27:1335,78,0	1/1:8,24:32:42.14:741,42,0	0/0:52,0:48:99:0,115,1626	0/0:57,0:51:99:0,105,1471	0/0:16,0:15:5.78:0,6,259
chr10	22314870	.	G	GTGTA	1562.27	PASS	AB=0.982;AC=8;AF=0.143;AN=56;BaseQRankSum=4.133;DP=1261;FS=3.343;HRun=0;HaplotypeScore=447.7060;InbreedingCoeff=0.4194;MQ=50.20;MQ0=11;MQRankSum=0.348;QD=6.32;ReadPosRankSum=1.749;VQSLOD=0.8211;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:91.51:0,92,1443	0/0:18,0:18:43.22:0,43,703	0/1:54,0:15:2.81:3,0,355	0/0:68,0:30:49.46:0,49,678	1/1:36,1:34:44.51:415,45,0	0/0:29,0:29:50.41:0,50,471	0/0:33,0:33:60.01:0,60,594	0/0:53,0:48:99:0,120,1104	0/0:37,0:37:99:0,100,1720	0/0:52,0:51:99:0,128,1267	0/0:35,0:33:83.71:0,84,811	0/0:59,0:58:99:0,120,1133	0/0:72,0:72:99:0,137,1639	0/0:62,0:63:99:0,143,1345	0/0:58,0:58:99:0,159,2775	0/0:74,0:71:99:0,186,3232	0/0:23,0:23:20.39:0,20,820	0/1:24,2:26:99:123,0,1005	0/0:22,0:21:60.18:0,60,1014	0/0:45,0:45:99:0,104,1862	0/0:80,0:79:99:0,202,3441	0/0:43,0:43:80.29:0,80,763	0/0:33,1:34:3.67:0,4,640	0/0:43,0:41:87.65:0,88,806	0/0:32,0:32:41.83:0,42,380	0/1:55,0:48:39.22:509,0,39	1/1:58,0:51:30.29:512,30,0	0/1:17,0:16:40.98:144,0,41
chr10	22314871	.	T	TGTA	1210.58	PASS	AB=1.000;AC=6;AF=0.107;AN=56;BaseQRankSum=4.170;DP=1261;FS=9.072;HRun=0;HaplotypeScore=430.0685;InbreedingCoeff=0.5853;MQ=50.43;MQ0=12;MQRankSum=-1.210;QD=7.29;ReadPosRankSum=4.463;VQSLOD=0.7884;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:88.60:0,89,1431	0/0:18,0:18:45.11:0,45,715	0/0:50,0:13:32.22:0,32,451	0/0:67,0:29:65.22:0,65,922	1/1:31,6:34:7.95:360,8,0	0/0:30,0:30:53.68:0,54,438	0/0:34,0:34:59.40:0,59,520	0/0:52,0:47:99:0,124,1179	0/0:38,0:38:99:0,100,1648	0/0:52,0:51:99:0,136,1215	0/0:35,0:33:84.36:0,84,723	0/0:58,0:57:99:0,122,980	0/0:75,0:75:99:0,195,1620	0/0:64,0:64:99:0,142,1172	0/0:59,0:59:99:0,162,2672	0/0:73,0:70:99:0,188,3110	0/0:23,0:23:60.01:0,60,891	0/0:25,0:25:12.31:0,12,981	0/0:23,0:21:60.20:0,60,993	0/0:44,0:44:99:0,103,1723	0/0:80,0:79:99:0,205,3370	0/0:46,0:46:86.63:0,87,766	0/0:37,0:37:63.38:0,63,703	0/0:43,0:41:86.90:0,87,736	0/0:30,0:30:44.69:0,45,327	0/1:55,0:48:99:430,0,106	1/1:57,0:51:43.74:450,44,0	0/1:17,0:16:69.21:102,0,69
chr10	22314872	.	G	GTA	5042.43	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=-2.338;DP=1264;FS=6.222;HRun=0;HaplotypeScore=396.7576;InbreedingCoeff=0.8179;MQ=50.47;MQ0=11;MQRankSum=-2.447;QD=26.40;ReadPosRankSum=0.644;VQSLOD=3.3133;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:39:89.91:0,90,1238	0/0:18,0:18:43.36:0,43,598	0/0:50,0:13:20.68:0,21,330	0/0:66,0:29:52.09:0,52,638	1/1:17,19:34:59.45:1137,59,0	0/0:29,0:29:54.44:0,54,331	0/0:35,0:35:60.27:0,60,383	0/0:51,0:47:93.93:0,94,794	0/0:41,0:41:99:0,99,1422	0/0:52,0:52:99:0,133,884	0/0:34,0:32:82.84:0,83,508	0/0:57,0:56:99:0,119,667	0/0:74,0:75:99:0,138,1013	0/0:65,0:65:99:0,141,807	0/0:60,0:60:99:0,165,2347	0/0:73,0:70:99:0,188,2706	0/0:23,0:23:60.13:0,60,729	0/1:25,0:25:9.69:10,0,807	0/0:23,0:21:60.12:0,60,831	0/0:44,0:44:99:0,102,1534	0/0:80,0:79:99:0,207,2930	0/0:45,0:45:91.44:0,91,586	0/0:37,0:37:58.59:0,59,485	0/0:43,0:41:83.07:0,83,474	0/0:31,0:31:39.66:0,40,195	1/1:24,32:49:40.74:1766,41,0	1/1:24,31:51:99:1829,112,0	1/1:13,4:16:1.71:302,2,0
chr10	22314876	.	GTA	G	906.50	PASS	AB=0.977;AC=6;AF=0.107;AN=56;BaseQRankSum=1.232;DP=1266;FS=0.000;HRun=0;HaplotypeScore=405.8911;InbreedingCoeff=0.3040;MQ=50.61;MQ0=12;MQRankSum=0.886;QD=4.62;ReadPosRankSum=-1.055;VQSLOD=1.4317;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:87.03:0,87,1512	0/0:15,0:15:19.96:0,20,684	0/1:44,0:11:0.27:0,0,177	0/0:65,0:28:12.89:0,13,492	0/0:34,0:32:61.14:0,61,802	0/0:32,0:32:23.36:0,23,212	0/0:36,0:36:56.38:0,56,285	0/1:47,1:45:99:238,0,209	0/0:43,0:43:99:0,102,1808	0/1:52,3:54:99:410,0,183	1/1:34,0:32:60.04:371,60,0	0/0:58,0:57:85.24:0,85,381	0/0:76,0:76:99:0,165,750	0/0:64,0:64:99:0,111,467	0/0:62,0:62:99:0,162,2899	0/0:74,0:70:99:0,184,3253	0/0:23,0:23:23.45:0,23,793	0/0:27,0:27:28.31:0,28,1108	0/0:22,0:20:57.03:0,57,954	0/0:46,0:46:99:0,111,1973	0/0:78,0:77:99:0,204,3604	0/0:49,0:49:91.48:0,91,492	0/0:40,0:40:80.57:0,81,416	0/0:42,0:40:55.25:0,55,276	0/0:35,0:35:47.74:0,48,235	0/0:53,0:48:70.38:0,70,1390	0/0:57,0:51:99:0,111,1183	0/1:14,0:14:6.19:6,0,229
chr10	22314936	.	ATG	A	430.53	PASS	AB=0.761;AC=2;AF=0.036;AN=56;BaseQRankSum=8.090;DP=1274;FS=2.363;HRun=0;HaplotypeScore=296.4142;InbreedingCoeff=-0.0375;MQ=51.06;MQ0=19;MQRankSum=-4.339;QD=5.74;ReadPosRankSum=-1.174;VQSLOD=2.5197;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:63.21:0,63,1065	0/0:15,0:15:41.99:0,42,703	0/0:52,0:12:17.80:0,18,247	0/0:46,0:15:22.39:0,22,286	0/1:21,18:38:99:483,0,254	0/0:29,0:29:69.21:0,69,1110	0/0:37,0:37:99:0,102,1694	0/0:67,0:66:99:0,171,2697	0/0:47,0:47:99:0,126,2161	0/0:54,0:54:99:0,133,2293	0/0:37,0:33:71.94:0,72,1245	0/0:66,0:65:99:0,156,2525	0/0:79,0:78:99:0,208,3365	0/0:54,0:54:99:0,102,1707	0/0:60,0:60:99:0,154,2639	0/0:63,0:59:99:0,150,2472	0/0:31,0:31:73.38:0,73,1378	0/0:31,0:31:64.25:0,64,1099	0/0:22,0:19:51.13:0,51,803	0/0:39,0:44:77.64:0,78,1622	0/0:77,0:76:99:0,205,3403	0/0:48,0:52:82.36:0,82,1698	0/0:43,0:46:96.31:0,96,1619	0/0:44,0:44:87.24:0,87,1413	0/1:29,2:36:36.41:36,0,976	0/0:52,0:45:99:0,110,1957	0/0:46,0:40:95.11:0,95,1493	0/0:16,0:16:38.80:0,39,717
chr10	22314974	.	ATG	A	4505.73	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=2.166;DP=1272;FS=0.000;HRun=0;HaplotypeScore=238.1812;InbreedingCoeff=0.9731;MQ=51.21;MQ0=30;MQRankSum=0.741;QD=31.07;ReadPosRankSum=-2.403;VQSLOD=4.3317;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:27:69.04:0,69,1088	0/0:11,0:11:27.06:0,27,433	0/0:56,2:18:8.16:0,8,461	0/0:52,0:22:39.07:0,39,586	0/0:50,0:49:99:0,112,1591	0/0:32,0:32:72.25:0,72,1220	0/0:41,0:41:89.75:0,90,1397	1/1:36,34:67:80.82:1992,81,0	0/0:47,0:47:99:0,123,2032	1/1:10,36:45:99:1599,124,0	1/1:9,19:26:69.23:915,69,0	0/0:70,0:70:99:0,166,2790	0/0:77,0:77:99:0,190,3173	0/0:44,0:43:93.30:0,93,1601	0/0:60,0:60:99:0,153,2476	0/0:67,0:65:99:0,175,2892	0/0:36,0:36:90.26:0,90,1671	0/0:28,0:27:47.09:0,47,1163	0/0:29,0:27:72.22:0,72,1149	0/0:36,0:36:84.34:0,84,1428	0/0:73,0:69:99:0,193,3174	0/0:33,0:33:87.28:0,87,1456	0/0:38,0:38:95.13:0,95,1584	0/0:52,1:53:99:0,132,2148	0/0:26,0:27:18.91:0,19,777	0/0:65,2:60:82.46:0,82,2196	0/0:46,0:38:84.23:0,84,1312	0/0:23,0:23:51.14:0,51,807
chr10	22315010	.	ATG	A	457.88	PASS	AB=0.843;AC=2;AF=0.036;AN=56;BaseQRankSum=6.274;DP=1271;FS=2.871;HRun=0;HaplotypeScore=221.5271;InbreedingCoeff=-0.0382;MQ=53.04;MQ0=44;MQRankSum=2.905;QD=3.98;ReadPosRankSum=-1.418;VQSLOD=2.6614;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:40:95.40:0,95,1494	0/0:13,0:13:24.08:0,24,394	0/0:47,0:10:11.70:0,12,167	0/1:69,0:18:20.10:20,0,230	0/1:25,21:46:99:526,0,631	0/0:34,0:34:93.19:0,93,1516	0/0:43,0:43:96.31:0,96,1650	0/0:62,0:59:99:0,148,2374	0/0:41,0:41:99:0,110,1834	0/0:50,0:49:99:0,138,2325	0/0:21,0:21:42.60:0,43,744	0/0:63,0:63:99:0,160,2689	0/0:69,0:69:99:0,178,2973	0/0:44,0:44:99:0,108,1859	0/0:59,0:59:99:0,150,2472	0/0:61,0:61:99:0,159,2634	0/0:33,1:34:53.43:0,53,1467	0/0:38,0:36:94.79:0,95,1622	0/0:17,0:13:33.10:0,33,544	0/0:33,0:33:80.87:0,81,1257	0/0:91,0:86:99:0,232,3939	0/0:35,0:35:81.24:0,81,1294	0/0:40,0:40:99:0,99,1656	0/0:56,1:57:99:0,126,2145	0/0:23,0:24:37.25:0,37,879	0/0:72,0:65:99:0,181,2988	0/0:42,0:36:93.28:0,93,1534	0/0:22,0:22:60.21:0,60,1038
chr10	22316368	.	AAAGCAAGC	A	3846.94	PASS	AB=1.000;AC=18;AF=0.321;AN=56;BaseQRankSum=-0.004;DP=610;FS=9.136;HRun=0;HaplotypeScore=199.7423;InbreedingCoeff=0.7972;MQ=54.85;MQ0=9;MQRankSum=0.488;QD=19.33;ReadPosRankSum=-0.431;VQSLOD=2.1825;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:33.08:0,33,694	0/0:12,0:11:24.08:0,24,446	0/0:29,0:17:21.35:0,21,385	0/0:25,0:15:23.53:0,24,295	1/1:29,0:29:9:196,9,0	0/0:28,0:28:57.19:0,57,1168	0/0:24,0:23:27.77:0,28,397	1/1:16,13:27:39.03:497,39,0	0/0:23,0:23:57.20:0,57,1409	1/1:9,17:26:54.14:1020,54,0	1/1:12,15:26:21.53:284,22,0	0/0:25,0:25:51.16:0,51,914	0/0:27,0:27:60.17:0,60,1150	0/0:23,0:23:45.13:0,45,958	1/1:25,0:25:6:634,6,0	0/1:15,0:15:47.09:218,0,47	0/0:28,0:27:66.15:0,66,1595	0/1:7,0:7:8.99:9,0,237	0/0:17,0:17:30.08:0,30,537	0/0:20,0:20:45.14:0,45,916	0/0:18,0:17:33.09:0,33,568	0/0:25,0:25:54.15:0,54,1165	0/0:18,0:18:33.11:0,33,687	0/0:21,0:21:37:0,37,667	0/0:24,0:24:57.18:0,57,989	1/1:19,0:19:33.06:431,33,0	1/1:15,0:18:35.90:483,36,0	1/1:3,0:4:5.93:75,6,0
chr10	22316395	.	GCA	G	112.78	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=5.952;DP=575;FS=13.855;HRun=0;HaplotypeScore=160.3050;InbreedingCoeff=0.1887;MQ=50.88;MQ0=13;MQRankSum=2.491;QD=0.98;ReadPosRankSum=1.500;VQSLOD=1.9577;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:19:57.19:0,57,998	0/0:11,0:10:30.05:0,30,523	0/0:16,0:11:9.87:0,10,466	0/0:13,0:9:26.57:0,27,403	1/1:4,15:19:7.41:121,7,0	0/0:26,0:26:69.24:0,69,1315	0/0:22,0:21:51.17:0,51,940	0/1:28,0:17:0.51:1,0,199	0/0:26,0:26:75.26:0,75,1387	0/1:25,0:25:46.35:46,0,306	0/0:24,0:22:39.17:0,39,404	0/0:25,0:25:60.18:0,60,1097	0/0:28,0:28:81.22:0,81,1430	0/0:23,0:23:63.15:0,63,1096	0/1:27,0:27:20.95:21,0,176	0/1:12,0:12:38.77:39,0,83	0/0:35,0:34:99:0,102,1709	0/0:13,0:13:31.62:0,32,509	0/0:18,0:15:45.13:0,45,759	0/0:23,0:23:66.23:0,66,1187	0/0:17,0:16:48.13:0,48,840	0/0:22,0:22:63.22:0,63,1179	0/0:16,0:15:39.10:0,39,721	0/0:21,0:21:47.49:0,47,849	0/0:26,0:26:69.24:0,69,1278	0/0:17,0:17:31.63:0,32,323	0/0:17,0:17:22.48:0,22,222	0/1:4,0:4:2.82:3,0,21
chr10	22316399	.	GCA	G	39.58	PASS	AB=1.000;AC=4;AF=0.071;AN=56;BaseQRankSum=4.984;DP=578;FS=4.492;HRun=0;HaplotypeScore=165.8761;InbreedingCoeff=0.5568;MQ=50.77;MQ0=14;MQRankSum=-0.713;QD=0.81;ReadPosRankSum=1.599;VQSLOD=2.7383;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:17:51.17:0,51,903	0/0:14,0:13:35.57:0,36,581	0/0:10,0:7:18.03:0,18,321	0/0:10,0:8:20.24:0,20,332	1/1:9,9:18:9.76:123,10,0	0/0:28,0:28:72.22:0,72,1301	0/0:22,0:21:54.14:0,54,950	0/0:31,0:19:41.48:0,41,399	0/0:26,0:26:75.26:0,75,1379	0/1:26,0:26:1.07:1,0,407	0/0:24,0:22:43.25:0,43,473	0/0:26,0:26:59.17:0,59,968	0/0:27,0:27:77.29:0,77,1360	0/0:22,0:22:60.20:0,60,1070	0/0:28,0:28:69.24:0,69,584	0/0:18,0:18:35.04:0,35,337	0/0:35,0:34:99:0,102,1680	0/0:14,0:14:17.01:0,17,512	0/0:16,0:13:39.13:0,39,676	0/0:24,0:24:69.23:0,69,1217	0/0:18,0:17:51.14:0,51,860	0/0:20,0:20:57.19:0,57,1069	0/0:16,0:15:39.59:0,40,709	0/0:22,0:22:45.11:0,45,814	0/0:27,0:27:66.23:0,66,1215	0/0:16,0:16:47.47:0,47,448	0/0:17,0:17:37.64:0,38,419	0/1:5,0:4:1.93:2,0,21
chr10	22316411	.	GAA	G	218.48	PASS	AB=0.788;AC=4;AF=0.074;AN=54;BaseQRankSum=5.437;DP=569;FS=2.210;HRun=3;HaplotypeScore=168.8798;InbreedingCoeff=0.2662;MQ=50.57;MQ0=14;MQRankSum=-4.803;QD=4.12;ReadPosRankSum=0.654;VQSLOD=-0.1042;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:24:69.22:0,69,1153	0/0:14,0:13:39.13:0,39,642	./.	0/0:2,0:1:2.99:0,3,23	1/1:19,0:19:3:28,3,0	0/0:26,0:26:62.32:0,62,661	0/0:23,0:22:41.32:0,41,525	0/0:33,0:20:48.14:0,48,742	0/0:27,0:27:78.25:0,78,1302	0/0:31,0:31:90.08:0,90,1424	0/0:23,0:22:60.03:0,60,1002	0/0:21,0:21:37.05:0,37,414	0/0:28,0:28:78.09:0,78,835	0/0:22,0:22:54.07:0,54,578	0/0:30,0:30:90.11:0,90,1384	0/0:21,0:21:63.18:0,63,1068	0/0:31,0:30:55.04:0,55,1557	0/0:16,0:16:45:0,45,695	0/0:20,0:15:44.89:0,45,705	0/0:25,0:25:75.24:0,75,1259	0/0:16,0:15:42.14:0,42,688	0/0:20,0:20:48.04:0,48,523	0/0:12,0:12:28.76:0,29,292	0/0:19,0:19:36.11:0,36,478	0/0:24,0:24:54.09:0,54,581	0/1:15,4:19:99:110,0,339	0/1:10,5:15:99:182,0,120	0/0:6,0:5:7.86:0,8,66
chr10	22316423	.	GAAAGAAAGAAAGAA	G	2601.42	PASS	AB=0.857;AC=8;AF=0.154;AN=52;BaseQRankSum=9.025;DP=608;FS=3.624;HRun=0;HaplotypeScore=299.8864;InbreedingCoeff=0.6264;MQ=51.85;MQ0=12;MQRankSum=-10.498;QD=35.15;ReadPosRankSum=2.830;VQSLOD=2.5905;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:27:81.27:0,81,2885	0/0:16,0:15:42.14:0,42,1403	./.	./.	1/1:15,0:15:3.01:62,3,0	0/0:30,0:30:22.67:0,23,1074	0/0:27,0:26:9.68:0,10,490	0/0:35,0:24:69.09:0,69,1665	0/0:25,0:25:72.25:0,72,3210	0/0:36,0:36:61.74:0,62,3458	0/0:28,0:27:69.24:0,69,2424	0/1:20,0:20:12.38:12,0,546	0/0:26,0:26:29.65:0,30,1188	0/0:23,0:23:12.23:0,12,940	0/0:35,0:35:99:0,105,3495	0/0:24,0:24:72.25:0,72,2898	0/0:34,0:33:99:0,99,4530	0/0:17,0:16:48.16:0,48,1534	0/0:23,0:19:57.19:0,57,1888	0/0:22,0:22:66.23:0,66,2924	0/0:14,0:13:39.12:0,39,1496	0/0:23,0:23:51.97:0,52,1439	0/0:12,0:12:14.28:0,14,541	0/0:23,0:23:41.44:0,41,798	0/0:29,0:29:22.90:0,23,805	1/1:18,0:17:51.11:1377,51,0	1/1:13,3:15:44.87:1061,45,0	0/1:3,1:4:83.96:231,0,84
chr10	22316435	.	GAA	G	1152.83	PASS	AB=0.800;AC=6;AF=0.107;AN=56;BaseQRankSum=5.262;DP=640;FS=0.633;HRun=3;HaplotypeScore=149.5321;InbreedingCoeff=0.5859;MQ=54.15;MQ0=10;MQRankSum=-4.280;QD=19.88;ReadPosRankSum=1.344;VQSLOD=1.4107;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:26:78.26:0,78,1301	0/0:16,0:15:45.15:0,45,729	0/0:6,0:2:1.88:0,2,41	0/0:2,1:1:3.01:0,3,43	0/1:13,0:13:12.55:16,0,13	0/0:30,0:30:54.08:0,54,692	0/0:31,0:30:46.98:0,47,524	0/0:30,0:24:69.21:0,69,1033	0/0:26,0:26:75.25:0,75,1262	0/0:39,0:39:87.29:0,87,1612	0/0:27,0:26:75.08:0,75,1199	0/0:23,0:23:35.68:0,36,427	0/0:33,0:33:65.77:0,66,839	0/0:26,0:26:54.10:0,54,721	0/0:35,0:35:99:0,105,1620	0/0:24,0:24:72.21:0,72,1210	0/0:34,0:33:99:0,99,1757	0/0:19,0:18:51.57:0,52,789	0/0:25,0:22:66.04:0,66,958	0/0:27,0:27:75.20:0,75,1234	0/0:14,0:13:36.12:0,36,607	0/0:20,0:20:47.07:0,47,642	0/0:16,0:16:31.51:0,32,355	0/0:24,0:24:43.13:0,43,545	0/0:27,0:27:30.01:0,30,336	1/1:1,16:15:35.81:562,36,0	1/1:4,15:18:35.51:544,36,0	0/1:3,6:9:7.62:167,0,8
chr10	22316448	.	AAAGG	A	4493.81	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=9.206;DP=690;FS=5.348;HRun=0;HaplotypeScore=154.0686;InbreedingCoeff=0.9800;MQ=56.35;MQ0=4;MQRankSum=-6.186;QD=19.20;ReadPosRankSum=2.481;VQSLOD=4.5540;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:31:87.30:0,87,2064	0/0:19,0:18:51.18:0,51,1221	0/0:14,0:8:20.55:0,21,377	0/0:9,0:5:12.04:0,12,281	0/0:17,0:17:10.14:0,10,111	1/1:1,29:30:39.13:667,39,0	1/1:6,17:23:18.06:308,18,0	0/0:34,0:33:78.16:0,78,1479	0/0:22,0:22:51.15:0,51,1088	0/0:42,0:42:99:0,105,2434	0/0:28,0:28:78.23:0,78,1803	1/1:3,28:31:36.09:614,36,0	1/1:3,30:33:51.65:862,52,0	1/1:4,25:29:42.14:695,42,0	0/0:41,0:41:99:0,111,2672	0/0:28,0:28:77.61:0,78,1785	0/0:34,0:33:81.01:0,81,1476	0/0:20,0:19:40.74:0,41,970	0/0:23,0:23:57.15:0,57,1268	0/0:27,0:27:66.22:0,66,1484	0/0:16,0:15:28.05:0,28,733	1/1:5,15:20:24.08:384,24,0	1/1:1,14:15:14.91:256,15,0	1/1:3,20:23:21.07:353,21,0	1/1:3,27:30:21.07:355,21,0	0/0:18,0:16:48.16:0,48,806	0/0:23,0:20:54.07:0,54,896	0/0:9,0:9:16.60:0,17,267
chr10	22317842	.	CA	C	8953.33	PASS	AB=0.962;AC=48;AF=0.857;AN=56;BaseQRankSum=9.840;DP=602;FS=0.455;HRun=10;HaplotypeScore=75.8535;InbreedingCoeff=0.7911;MQ=78.34;MQ0=0;MQRankSum=-2.540;QD=16.99;ReadPosRankSum=2.342;VQSLOD=5.4083;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:75.18:0,75,819	1/1:0,13:13:35.99:313,36,0	0/1:16,0:16:0.33:0,0,166	0/1:11,1:12:15.90:16,0,73	1/1:4,0:27:38.51:123,39,0	1/1:3,19:23:59.02:501,59,0	1/1:3,15:18:44.99:391,45,0	1/1:3,19:22:56.96:495,57,0	1/1:0,21:21:56.99:495,57,0	1/1:7,27:34:77.95:677,78,0	1/1:3,15:18:44.98:390,45,0	1/1:2,15:17:41.99:365,42,0	1/1:1,19:20:50.99:443,51,0	1/1:1,15:16:41.99:365,42,0	0/0:22,0:22:60.16:0,60,664	0/0:25,1:26:43.12:0,43,696	1/1:2,15:17:41.99:365,42,0	1/1:1,14:15:41.99:365,42,0	1/1:4,31:35:95.95:829,96,0	1/1:5,21:26:59.97:521,60,0	1/1:4,10:14:23.98:208,24,0	1/1:2,27:29:71.98:625,72,0	1/1:5,13:18:35.98:312,36,0	1/1:2,10:12:29.99:260,30,0	1/1:3,19:22:53.98:469,54,0	1/1:3,1:31:58:188,58,0	1/1:2,0:38:61.10:180,61,0	1/1:0,0:12:20.37:60,20,0
chr10	22318868	.	C	CAAT	5114.63	PASS	AC=48;AF=0.889;AN=54;BaseQRankSum=-3.132;DP=214;FS=7.105;HRun=0;HaplotypeScore=39.2561;InbreedingCoeff=0.5223;MQ=76.33;MQ0=0;MQRankSum=-0.540;QD=26.36;ReadPosRankSum=2.953;VQSLOD=3.3485;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:7:2.97:0,3,20	1/1:5,0:5:11.61:78,12,0	0/0:4,0:4:3.01:0,3,40	0/0:9,0:8:7.37:0,7,78	1/1:9,0:9:14.09:122,14,0	1/1:2,8:10:24.08:500,24,0	1/1:0,4:4:12.04:250,12,0	1/1:31,0:30:69.21:1102,69,0	1/1:10,0:10:7.40:39,7,0	1/1:6,0:6:9.02:110,9,0	1/1:9,0:9:9.03:147,9,0	1/1:6,1:8:9.03:157,9,0	1/1:2,1:3:3.01:63,3,0	1/1:2,5:7:12.04:250,12,0	1/1:2,6:8:12.04:250,12,0	1/1:1,5:6:9.03:188,9,0	1/1:9,0:9:19.60:86,20,0	1/1:8,0:8:9.46:165,9,0	1/1:11,0:11:25.02:223,25,0	1/1:11,0:11:17.39:138,17,0	1/1:6,0:6:13.86:83,14,0	1/1:0,1:1:3.01:63,3,0	1/1:5,0:5:6.02:113,6,0	./.	1/1:4,8:12:15.05:313,15,0	1/1:2,1:3:6.02:116,6,0	1/1:3,3:6:12.04:239,12,0	1/1:3,3:6:18.06:320,18,0
chr10	22318880	.	T	TAATATA	4167.88	PASS	AB=1.000;AC=36;AF=0.667;AN=54;BaseQRankSum=-7.424;DP=190;FS=2.994;HRun=0;HaplotypeScore=51.9001;InbreedingCoeff=-0.2534;MQ=69.19;MQ0=0;MQRankSum=-1.528;QD=23.55;ReadPosRankSum=-2.114;VQSLOD=2.7987;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:6:2.74:0,3,12	0/1:7,0:7:34.42:34,0,49	0/1:3,0:3:6.09:6,0,34	0/0:7,0:6:0.38:0,0,89	0/1:8,0:8:57.75:74,0,58	1/1:8,0:8:23.73:156,24,0	0/1:5,0:5:23.29:64,0,23	1/1:1,30:35:99:2088,102,0	0/1:5,0:5:12.50:12,0,38	1/1:0,2:3:9.02:171,9,0	1/1:0,4:4:9.03:314,9,0	1/1:3,0:3:8.70:114,9,0	0/1:3,0:3:10.60:11,0,76	0/1:6,0:6:21.83:63,0,22	1/1:7,0:7:11.87:78,12,0	1/1:6,0:6:8.90:59,9,0	0/1:10,0:10:5.15:5,0,99	0/1:10,0:10:62.53:134,0,63	0/1:11,0:11:33.19:132,0,33	0/1:8,0:8:45.32:82,0,45	0/1:8,0:8:35.07:35,0,49	1/1:1,0:1:2.97:20,3,0	0/1:4,0:4:26.83:61,0,27	./.	0/1:9,0:9:24.09:80,0,24	1/1:2,0:2:5.98:73,6,0	1/1:4,0:4:11.89:110,12,0	1/1:6,0:6:17.92:191,18,0
chr10	22318918	.	AC	A	562.96	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=2.505;DP=262;FS=2.409;HRun=2;HaplotypeScore=40.5433;InbreedingCoeff=0.8626;MQ=77.09;MQ0=0;MQRankSum=-0.670;QD=29.63;ReadPosRankSum=-1.422;VQSLOD=2.8424;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:8:18.06:0,18,270	0/0:7,0:7:21.07:0,21,315	0/0:8,0:8:22.62:0,23,299	0/0:6,0:4:8.04:0,8,133	0/0:12,0:12:36.12:0,36,539	0/0:16,0:16:45.15:0,45,673	0/0:7,0:7:21.07:0,21,315	0/0:34,0:34:99:0,99,1465	0/0:6,0:6:18.06:0,18,270	0/0:5,0:5:15.05:0,15,224	0/0:11,0:11:33.10:0,33,473	0/0:3,0:3:9.03:0,9,135	0/0:3,0:3:9.03:0,9,135	0/0:8,0:8:21.07:0,21,315	0/0:6,0:6:18.06:0,18,270	0/0:10,0:10:30.10:0,30,450	0/0:16,0:16:48.15:0,48,696	0/0:10,0:10:30.10:0,30,449	0/0:15,0:15:39.11:0,39,558	0/0:13,0:13:39.13:0,39,585	0/0:9,0:9:27.09:0,27,403	0/0:5,0:5:15.05:0,15,225	0/0:5,0:5:12.04:0,12,169	0/0:2,0:2:6.02:0,6,90	0/0:18,0:18:51.17:0,51,764	1/1:1,6:7:18.06:234,18,0	1/1:0,7:7:21.07:273,21,0	1/1:0,5:5:15.05:195,15,0
chr10	22319100	.	AT	A	1616.77	PASS	AB=0.523;AC=7;AF=0.125;AN=56;BaseQRankSum=11.649;DP=483;FS=0.000;HRun=6;HaplotypeScore=56.2480;InbreedingCoeff=0.8472;MQ=72.66;MQ0=0;MQRankSum=-1.214;QD=23.43;ReadPosRankSum=3.569;VQSLOD=2.9597;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:57.19:0,57,750	0/0:6,0:6:18.06:0,18,237	0/0:8,0:8:19.15:0,19,216	0/0:12,0:12:24.08:0,24,314	1/1:3,10:13:27.06:288,27,0	0/0:30,0:30:84.27:0,84,1100	0/0:13,0:13:33.11:0,33,434	0/0:31,0:31:75.23:0,75,963	0/0:21,0:21:63.18:0,63,799	0/0:21,0:21:63.19:0,63,802	0/0:15,0:15:42.14:0,42,552	0/0:23,0:23:69.22:0,69,907	0/0:10,0:10:27.09:0,27,355	0/0:28,0:28:81.26:0,81,1060	0/0:21,0:21:57.18:0,57,736	0/0:25,0:25:72.21:0,72,919	0/0:11,0:11:27.07:0,27,341	0/0:11,0:11:33.07:0,33,398	0/0:18,0:18:45.12:0,45,555	0/0:15,0:15:42.12:0,42,537	0/0:7,0:7:21.06:0,21,263	0/0:17,0:17:51.17:0,51,667	0/0:17,0:17:42.12:0,42,538	0/0:20,0:20:60.15:0,60,769	0/0:12,0:12:36.12:0,36,473	0/1:2,21:23:9.78:607,0,10	1/1:2,12:14:33.08:355,33,0	1/1:1,18:19:48.12:515,48,0
chr10	22319929	.	G	GA	642.08	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-5.251;DP=591;FS=0.000;HRun=6;HaplotypeScore=74.2591;InbreedingCoeff=0.9402;MQ=77.00;MQ0=0;MQRankSum=-1.398;QD=24.70;ReadPosRankSum=0.687;VQSLOD=3.3203;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,25:26:60.15:737,60,0	0/0:10,0:10:30.07:0,30,306	0/0:14,0:14:28.40:0,28,247	0/0:12,0:11:21.04:0,21,208	0/0:25,0:25:69.12:0,69,684	0/0:27,0:27:69.15:0,69,703	0/0:16,0:16:42.09:0,42,428	0/0:34,0:34:99:0,99,967	0/0:19,0:19:51.11:0,51,520	0/0:25,0:25:69.09:0,69,690	0/0:23,0:23:66.15:0,66,672	0/0:19,0:19:54.12:0,54,551	0/0:22,0:22:60.13:0,60,612	0/0:28,0:28:75.16:0,75,764	0/0:16,0:16:48.10:0,48,484	0/0:26,0:26:72.16:0,72,734	0/0:19,0:19:54.12:0,54,551	0/0:18,0:18:51.08:0,51,510	0/0:20,0:20:51.11:0,51,520	0/0:22,0:22:63.13:0,63,636	0/0:24,0:24:69.16:0,69,704	0/0:18,0:18:45.09:0,45,452	0/0:21,0:21:51.11:0,51,518	0/0:13,0:13:36.08:0,36,367	0/0:26,0:26:78.18:0,78,796	0/0:35,0:35:96.21:0,96,977	0/0:24,0:24:51.08:0,51,513	0/0:9,0:9:9.02:0,9,91
chr10	22320335	.	TC	T	730.37	PASS	AB=0.710;AC=3;AF=0.054;AN=56;BaseQRankSum=6.641;DP=573;FS=6.599;HRun=1;HaplotypeScore=56.1798;InbreedingCoeff=-0.0588;MQ=81.29;MQ0=0;MQRankSum=-6.665;QD=8.59;ReadPosRankSum=2.808;VQSLOD=1.1252;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:39.13:0,39,623	0/0:10,0:10:30.10:0,30,479	0/0:16,0:16:47.84:0,48,643	0/0:20,0:20:38.62:0,39,761	0/0:37,0:37:99:0,108,1722	0/0:27,0:26:81.25:0,81,1247	0/0:19,0:19:57.19:0,57,911	0/0:26,0:26:78.22:0,78,1179	0/0:16,0:16:48.13:0,48,720	0/0:26,0:26:78.26:0,78,1214	0/0:26,0:26:78.25:0,78,1224	0/0:16,0:16:48.16:0,48,767	0/0:21,0:21:63.21:0,63,999	0/0:13,0:13:39.13:0,39,616	0/0:21,0:21:63.21:0,63,1007	0/0:20,0:20:60.20:0,60,959	0/0:16,0:16:48.16:0,48,759	0/0:4,0:4:9.03:0,9,136	0/0:21,0:21:63.21:0,63,1008	0/0:30,0:30:90.31:0,90,1438	0/0:11,0:11:33.11:0,33,528	0/0:13,0:13:39.13:0,39,623	0/0:22,0:22:66.23:0,66,1054	0/0:11,0:11:33.11:0,33,527	0/0:33,0:33:96.33:0,96,1515	0/1:16,19:35:99:690,0,503	0/1:28,16:43:99:114,0,874	0/1:4,2:6:26.78:27,0,172
chr10	22320814	.	TC	T	2061.81	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=11.616;DP=525;FS=1.109;HRun=1;HaplotypeScore=63.5924;InbreedingCoeff=0.9943;MQ=71.31;MQ0=0;MQRankSum=-8.004;QD=37.49;ReadPosRankSum=-0.983;VQSLOD=3.5896;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:57.18:0,57,830	0/0:10,0:10:30.09:0,30,429	0/0:12,0:12:35.60:0,36,470	0/0:16,0:14:23.13:0,23,404	0/0:36,0:36:99:0,108,1562	0/0:20,0:20:60.20:0,60,897	0/0:15,0:15:45.14:0,45,652	0/0:29,0:29:87.29:0,87,1302	0/0:11,0:11:33.11:0,33,494	0/0:27,0:27:81.26:0,81,1182	0/0:27,0:27:78.25:0,78,1148	0/0:24,0:24:72.24:0,72,1076	0/0:17,0:17:51.17:0,51,762	0/0:13,0:13:39.13:0,39,582	0/0:18,0:18:54.06:0,54,736	0/0:21,0:21:63.20:0,63,922	0/0:20,0:20:60.19:0,60,876	0/0:17,0:17:50.99:0,51,640	0/0:15,0:15:45.14:0,45,638	0/0:21,0:21:63.16:0,63,862	0/0:7,0:7:21.07:0,21,314	0/0:11,0:11:33.08:0,33,453	0/0:24,0:24:69.21:0,69,992	0/0:15,0:15:45.14:0,45,651	0/0:25,0:25:75.17:0,75,1071	1/1:1,19:20:60.19:817,60,0	1/1:3,26:29:84.26:1136,84,0	1/1:0,6:6:18.06:250,18,0
chr10	22320833	.	TA	T	1466.39	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=11.490;DP=527;FS=13.547;HRun=7;HaplotypeScore=64.1681;InbreedingCoeff=0.8222;MQ=68.42;MQ0=0;MQRankSum=-5.862;QD=20.65;ReadPosRankSum=0.554;VQSLOD=2.2504;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:54.17:0,54,678	0/0:12,0:12:36.12:0,36,453	0/1:9,0:9:1.66:2,0,139	0/0:14,0:12:0.17:0,0,232	0/0:39,0:39:99:0,102,1279	0/0:23,0:23:63.17:0,63,765	0/0:14,0:14:36.12:0,36,452	0/0:29,0:29:85.11:0,85,1001	0/0:10,0:10:30.10:0,30,377	0/0:24,0:24:69.22:0,69,868	0/0:26,0:26:72.23:0,72,906	0/0:24,0:24:66.20:0,66,818	0/0:19,0:19:57.16:0,57,698	0/0:12,0:12:33.11:0,33,415	0/0:18,0:18:54.15:0,54,662	0/0:20,0:20:54.17:0,54,679	0/0:17,0:17:42.99:0,43,514	0/0:15,0:15:42.13:0,42,528	0/0:20,0:20:48.15:0,48,593	0/0:18,0:18:51.13:0,51,604	0/0:9,0:9:27.03:0,27,309	0/0:10,0:10:27.09:0,27,337	0/0:25,0:25:69.19:0,69,832	0/0:10,0:10:27.09:0,27,340	0/0:28,0:28:78.22:0,78,964	1/1:1,23:24:72.14:723,72,0	1/1:5,26:31:66.14:670,66,0	1/1:1,6:7:21.05:214,21,0
chr10	22321060	.	TTGTGTG	T	4093.16	PASS	AB=0.708;AC=22;AF=0.407;AN=54;BaseQRankSum=0.517;DP=562;FS=1.151;HRun=0;HaplotypeScore=148.0208;InbreedingCoeff=0.5894;MQ=61.08;MQ0=7;MQRankSum=-5.033;QD=14.78;ReadPosRankSum=3.639;VQSLOD=2.9140;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:11,0:31:20.54:30,0,21	0/0:3,0:5:8.98:0,9,189	./.	0/0:23,0:16:0.71:0,1,20	0/0:4,1:27:1.95:0,2,92	1/1:11,13:24:24.08:488,24,0	1/1:7,3:10:3.01:62,3,0	0/0:21,0:28:28.18:0,28,340	0/0:5,0:10:12.04:0,12,292	0/0:14,0:21:22.51:0,23,281	0/0:10,0:22:29.93:0,30,396	1/1:2,23:25:35.82:658,36,0	0/1:8,9:19:6.13:609,0,6	0/1:7,18:26:1.84:725,0,2	1/1:8,1:23:16.06:140,16,0	1/1:13,1:28:10.53:77,11,0	0/1:17,0:21:3.35:3,0,456	0/0:11,0:13:10.39:0,10,113	0/0:13,0:16:6.36:0,6,95	0/0:10,0:21:10.10:0,10,347	0/0:12,0:16:4.44:0,4,149	1/1:5,6:10:12:202,12,0	1/1:6,10:16:20.86:339,21,0	1/1:10,13:23:19.05:252,19,0	1/1:6,10:18:32.98:508,33,0	0/0:11,0:25:40.26:0,40,463	0/0:6,0:28:37.53:0,38,574	0/0:1,0:4:6.02:0,6,80
chr10	22321805	.	T	TAA	13673.60	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-5.373;DP=469;FS=2.746;HRun=1;HaplotypeScore=214.4448;InbreedingCoeff=0.8085;MQ=63.66;MQ0=0;MQRankSum=-3.934;QD=30.66;ReadPosRankSum=11.893;VQSLOD=3.5344;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,4:7:20.98:236,21,0	1/1:6,11:17:46.42:574,46,0	0/0:15,0:15:41.89:0,42,578	0/0:8,0:8:18.04:0,18,253	1/1:9,25:34:38.17:714,38,0	1/1:6,19:25:54.69:814,55,0	1/1:3,4:7:18.01:227,18,0	1/1:10,8:18:50.99:640,51,0	1/1:6,10:15:29.30:396,29,0	1/1:6,8:14:39.08:536,39,0	1/1:5,27:32:48.82:813,49,0	1/1:6,8:14:30.56:369,31,0	1/1:4,15:19:39.82:565,40,0	1/1:8,15:23:54.93:680,55,0	1/1:2,10:11:28.72:422,29,0	1/1:7,13:20:38.70:577,39,0	1/1:6,3:9:5.98:62,6,0	1/1:1,4:5:15.01:205,15,0	1/1:6,8:14:39.09:520,39,0	1/1:11,17:28:57.96:784,58,0	1/1:2,0:2:3:29,3,0	1/1:10,12:22:47:580,47,0	1/1:6,14:20:51.48:725,51,0	1/1:1,6:7:12.27:154,12,0	1/1:8,17:25:66.16:911,66,0	1/1:7,23:30:87.16:1199,87,0	1/1:5,16:21:58.68:809,59,0	1/1:0,5:5:6.65:135,7,0
chr10	22321808	.	A	ATAGCT	31222.02	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=3.895;DP=537;FS=1.876;HRun=0;HaplotypeScore=219.3909;InbreedingCoeff=0.8712;MQ=59.99;MQ0=0;MQRankSum=-7.549;QD=60.86;ReadPosRankSum=2.946;VQSLOD=5.0173;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,4:9:15.04:350,15,0	1/1:8,11:19:57.15:1307,57,0	0/0:15,0:15:39.13:0,39,821	0/0:9,0:9:21.07:0,21,415	1/1:12,25:37:81.23:1908,81,0	1/1:8,19:27:72.19:1612,72,0	1/1:3,4:7:18.06:497,18,0	1/1:19,8:27:79.70:1629,80,0	1/1:11,10:20:56.92:1337,57,0	1/1:8,7:16:46.39:1092,46,0	1/1:5,27:32:87.29:2231,87,0	1/1:9,8:17:48.15:1102,48,0	1/1:11,14:26:72.19:1687,72,0	1/1:14,15:29:63.15:1403,63,0	1/1:3,10:12:33.11:841,33,0	1/1:11,14:25:68.03:1592,68,0	1/1:7,3:10:21.94:389,22,0	1/1:1,4:5:12.04:340,12,0	1/1:7,8:15:42.13:1015,42,0	1/1:17,17:34:80.29:1791,80,0	1/1:2,0:2:3:28,3,0	1/1:8,12:20:54.14:1132,54,0	1/1:11,14:25:65.20:1463,65,0	1/1:1,6:7:11.42:324,11,0	1/1:9,17:26:75.23:1823,75,0	1/1:9,23:32:83.91:2108,84,0	1/1:10,15:26:72.23:1743,72,0	1/1:1,5:6:18.06:477,18,0
chr10	22321809	.	T	TA	7961.15	PASS	AB=0.821;AC=51;AF=0.911;AN=56;BaseQRankSum=5.454;DP=518;FS=15.595;HRun=1;HaplotypeScore=272.5644;InbreedingCoeff=0.6636;MQ=59.71;MQ0=0;MQRankSum=-5.937;QD=16.15;ReadPosRankSum=6.045;VQSLOD=1.9857;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,1:9:14.64:125,15,0	1/1:14,5:19:45.62:377,46,0	0/0:15,0:15:39.13:0,39,524	0/0:10,0:9:21.07:0,21,287	1/1:32,5:37:70.39:449,70,0	1/1:23,4:27:46.96:498,47,0	1/1:6,1:7:15.31:87,15,0	1/1:18,5:23:36.42:337,36,0	1/1:18,3:20:18.23:186,18,0	1/1:13,2:16:41.10:323,41,0	1/1:30,2:32:26.22:459,26,0	1/1:12,4:16:36.05:315,36,0	1/1:22,3:25:29.91:362,30,0	1/1:24,4:28:54.29:442,54,0	1/1:11,2:12:30.03:213,30,0	1/1:22,3:25:45.78:370,46,0	1/1:5,4:9:12.16:140,12,0	1/1:4,1:5:11.63:73,12,0	1/1:11,3:14:13.95:251,14,0	0/1:25,7:32:21.55:519,0,22	1/1:0,1:1:3.01:48,3,0	1/1:14,4:18:48.41:451,48,0	1/1:21,3:24:57.63:444,58,0	1/1:6,1:7:12.88:57,13,0	1/1:20,5:25:65.48:495,65,0	1/1:26,2:28:75.69:473,76,0	1/1:21,5:26:25.39:419,25,0	1/1:6,0:6:9.70:47,10,0
chr10	22321886	.	G	GGGGGAA	12948.85	PASS	AB=0.568;AC=51;AF=0.911;AN=56;BaseQRankSum=3.346;DP=578;FS=40.248;HRun=0;HaplotypeScore=164.0908;InbreedingCoeff=0.6356;MQ=50.49;MQ0=25;MQRankSum=-0.955;QD=30.83;ReadPosRankSum=1.665;VQSLOD=2.9996;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:11:11.83:171,12,0	1/1:12,0:12:32.96:604,33,0	0/0:72,0:26:57.26:0,57,943	0/0:86,0:30:72.62:0,73,1414	1/1:23,0:22:38.80:668,39,0	0/1:6,14:25:16.11:265,0,16	1/1:9,0:9:5.98:77,6,0	1/1:18,0:17:45.15:947,45,0	1/1:15,0:14:41.72:664,42,0	1/1:24,0:23:32.19:834,32,0	1/1:18,0:18:32.18:440,32,0	1/1:14,0:14:35.37:583,35,0	1/1:23,1:24:68.98:1328,69,0	1/1:10,8:20:24.02:443,24,0	1/1:17,0:18:10.85:219,11,0	1/1:24,0:24:38.61:815,39,0	1/1:6,0:7:12.33:101,12,0	1/1:10,0:10:9.03:161,9,0	1/1:10,0:9:20.32:265,20,0	1/1:23,0:22:51.71:864,52,0	1/1:5,0:5:11.90:272,12,0	1/1:13,0:13:24.03:420,24,0	1/1:14,0:16:15.05:281,15,0	1/1:10,0:8:2.97:20,3,0	1/1:7,9:16:21.01:386,21,0	1/1:16,0:16:29.24:697,29,0	1/1:30,0:28:49.52:1068,50,0	1/1:8,0:8:23.73:357,24,0
chr10	22321887	.	G	GGGGA	11665.26	PASS	AB=0.841;AC=49;AF=0.875;AN=56;BaseQRankSum=2.304;DP=546;FS=46.070;HRun=0;HaplotypeScore=135.1267;InbreedingCoeff=0.4706;MQ=51.53;MQ0=25;MQRankSum=-0.625;QD=29.99;ReadPosRankSum=3.376;VQSLOD=2.5219;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,0:10:9.02:129,9,0	1/1:8,0:11:33.09:618,33,0	0/0:71,0:26:57.26:0,57,947	0/0:86,0:30:71.44:0,71,1411	1/1:11,0:17:39.12:682,39,0	0/1:23,1:24:0.44:171,0,0	1/1:0,7:8:5.98:77,6,0	1/1:15,0:15:45.15:951,45,0	1/1:11,0:11:33.06:558,33,0	1/1:19,0:26:27.20:902,27,0	1/1:9,0:15:32.27:454,32,0	1/1:10,3:13:15.32:491,15,0	1/1:15,5:19:52.98:1091,53,0	1/1:16,3:19:15.05:296,15,0	0/1:4,13:18:0.42:260,0,0	1/1:6,12:20:9.38:457,9,0	0/1:5,0:7:6.55:105,0,7	1/1:2,7:10:9.03:175,9,0	1/1:10,0:10:18.74:275,19,0	1/1:12,0:19:50.10:839,50,0	1/1:5,1:6:9.51:268,10,0	1/1:11,1:13:1.86:351,2,0	1/1:3,8:13:5.95:75,6,0	1/1:2,7:8:2.22:7,2,0	1/1:13,2:15:14.96:223,15,0	1/1:10,0:16:25.43:747,25,0	1/1:21,0:27:52.32:1123,52,0	1/1:4,0:7:21.06:340,21,0
chr10	22321889	.	G	GGA	6736.27	PASS	AB=0.979;AC=39;AF=0.696;AN=56;BaseQRankSum=3.898;DP=551;FS=58.161;HRun=0;HaplotypeScore=141.6738;InbreedingCoeff=-0.0178;MQ=50.29;MQ0=28;MQRankSum=-3.459;QD=17.32;ReadPosRankSum=5.499;VQSLOD=2.5988;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,7:11:8.99:83,9,0	1/1:11,0:11:32.95:398,33,0	0/0:67,0:24:53.33:0,53,717	0/0:85,0:29:64.79:0,65,1043	1/1:18,0:17:39.03:435,39,0	0/1:25,0:25:45.76:46,0,87	1/1:7,0:7:3.01:37,3,0	1/1:17,0:16:42.04:605,42,0	1/1:14,0:11:29.97:342,30,0	0/1:27,0:26:8.72:546,0,9	1/1:15,0:15:22.94:294,23,0	0/1:12,1:13:22.25:282,0,22	1/1:18,2:19:4.25:558,4,0	0/1:20,1:21:27.06:167,0,27	0/1:17,0:17:44.02:69,0,44	0/1:20,0:20:83.28:143,0,83	0/1:7,0:7:20.88:67,0,21	1/1:10,0:10:9.03:117,9,0	1/1:11,0:10:13.38:117,13,0	1/1:20,0:19:50.53:551,51,0	1/1:6,0:6:3.88:166,4,0	0/1:13,1:14:81.84:169,0,82	0/1:13,0:13:11.59:32,0,12	0/0:10,0:8:2.22:0,2,7	0/1:18,1:19:41.36:97,0,41	0/1:17,0:16:7.30:454,0,7	1/1:29,0:27:37.20:727,37,0	1/1:7,0:7:21:234,21,0
chr10	22321892	.	AGAGAGAGAG	A	2253.53	PASS	AB=0.808;AC=15;AF=0.268;AN=56;BaseQRankSum=5.549;DP=547;FS=43.040;HRun=0;HaplotypeScore=190.5623;InbreedingCoeff=0.2998;MQ=47.84;MQ0=29;MQRankSum=-0.377;QD=13.10;ReadPosRankSum=1.029;VQSLOD=0.9551;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:9,0:11:65.60:66,0,85	0/1:9,0:12:1.82:2,0,273	0/0:64,0:21:38.05:0,38,570	0/0:83,0:29:76.28:0,76,982	0/1:11,0:17:16.53:61,0,17	0/0:25,0:25:13.79:0,14,510	0/0:6,0:6:1.72:0,2,3	1/1:15,0:15:21.25:82,21,0	0/1:12,0:11:18.29:18,0,74	0/1:17,0:26:99:484,0,107	0/1:8,0:15:22.98:305,0,23	0/0:13,0:13:11.83:0,12,569	0/0:21,0:20:24.85:0,25,1241	0/0:20,0:20:22.66:0,23,820	0/0:16,0:16:21.07:0,21,784	0/0:21,0:21:25.75:0,26,1014	0/0:5,0:7:8.67:0,9,73	0/0:9,0:10:4.06:0,4,81	0/0:10,0:10:15.92:0,16,123	0/0:12,0:19:16.61:0,17,298	0/1:6,0:6:4.91:5,0,40	0/0:14,0:14:1.80:0,2,435	0/0:14,0:14:8.17:0,8,249	0/0:9,0:8:2.84:0,3,14	0/0:19,0:19:25.88:0,26,876	1/1:11,4:16:14.43:374,14,0	1/1:22,7:27:38.55:770,39,0	1/1:4,2:7:13.55:255,14,0
chr10	22321896	.	AG	A	335.22	PASS	AB=0.989;AC=11;AF=0.196;AN=56;BaseQRankSum=8.610;DP=544;FS=3.714;HRun=1;HaplotypeScore=153.2425;InbreedingCoeff=-0.0652;MQ=42.05;MQ0=30;MQRankSum=-5.592;QD=2.01;ReadPosRankSum=4.509;VQSLOD=-0.3470;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:11,0:11:10.58:11,0,29	0/0:12,0:12:20.70:0,21,182	0/0:53,0:17:49.92:0,50,590	0/0:77,0:28:72.10:0,72,865	0/0:16,0:15:0.09:0,0,39	0/0:27,0:27:18.04:0,18,251	0/0:6,0:6:3.01:0,3,38	0/1:20,0:19:23.32:23,0,276	0/0:14,0:11:20.12:0,20,170	0/1:25,3:27:99:195,0,300	1/1:15,1:16:14.07:87,14,0	0/0:12,0:12:23.80:0,24,312	0/0:20,0:19:48.10:0,48,639	0/0:22,0:22:29.83:0,30,416	0/0:17,0:17:24.03:0,24,340	0/0:23,0:23:30.10:0,30,449	0/1:7,0:7:14.57:15,0,81	0/0:10,0:10:8.76:0,9,88	0/0:12,0:11:23.87:0,24,261	0/1:20,0:19:46.69:47,0,141	0/0:6,0:6:10.78:0,11,97	0/0:14,0:14:14.87:0,15,211	0/0:13,0:13:8.84:0,9,122	0/1:12,0:9:20.32:20,0,32	0/0:22,0:22:32.79:0,33,446	0/1:19,0:18:50.53:51,0,266	0/1:29,0:27:9.32:9,0,328	0/1:5,0:5:23.01:26,0,23
chr10	22321908	.	AG	A	988.57	PASS	AB=0.817;AC=5;AF=0.089;AN=56;BaseQRankSum=4.321;DP=515;FS=4.928;HRun=1;HaplotypeScore=144.0955;InbreedingCoeff=0.3016;MQ=47.90;MQ0=31;MQRankSum=-2.694;QD=13.01;ReadPosRankSum=1.358;VQSLOD=2.8494;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:8.62:0,9,101	0/0:9,0:9:21.42:0,21,224	0/0:38,0:15:32.24:0,32,519	0/0:66,0:27:67.30:0,67,789	0/0:16,0:15:18.92:0,19,206	0/0:28,0:28:21.06:0,21,288	0/0:9,0:9:10.67:0,11,134	0/1:7,15:20:69.53:453,0,70	0/0:11,0:8:20.01:0,20,176	0/1:20,4:23:99:396,0,136	1/1:13,6:18:29:252,29,0	0/0:11,0:11:20.86:0,21,302	0/0:21,0:20:51.16:0,51,703	0/0:21,0:21:35.83:0,36,475	0/0:19,0:19:27.09:0,27,397	0/0:24,0:24:33.10:0,33,475	0/0:8,0:7:11.46:0,11,107	0/0:10,0:10:11.77:0,12,125	0/0:13,0:10:24.84:0,25,275	0/0:18,0:17:30.27:0,30,263	0/0:8,0:8:18.06:0,18,230	0/0:13,0:13:14.88:0,15,220	0/0:13,0:13:14.86:0,15,197	0/1:11,0:8:6.71:7,0,32	0/0:22,0:22:38.81:0,39,521	0/0:17,0:16:39.59:0,40,450	0/0:27,0:25:47.26:0,47,487	0/0:6,0:5:8.26:0,8,82
chr10	22321909	.	G	GGGA	1592.37	PASS	AB=0.978;AC=7;AF=0.125;AN=56;BaseQRankSum=2.546;DP=519;FS=4.718;HRun=0;HaplotypeScore=157.0784;InbreedingCoeff=0.2244;MQ=50.52;MQ0=29;MQRankSum=-2.180;QD=16.42;ReadPosRankSum=0.087;VQSLOD=3.0098;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:11,0:11:0.71:1,0,129	0/0:9,0:9:24.07:0,24,348	0/0:37,0:15:31.93:0,32,576	0/0:69,0:30:51.91:0,52,1012	0/0:15,0:14:21.07:0,21,338	0/0:28,0:28:21.05:0,21,312	0/1:9,0:9:4.38:4,0,172	0/1:23,0:21:21.55:789,0,22	0/0:10,0:7:20.28:0,20,287	0/1:21,3:23:75.38:537,0,75	1/1:18,1:18:29.44:376,29,0	0/0:11,0:11:21.05:0,21,332	0/0:21,0:20:50.88:0,51,692	0/0:22,0:22:36.09:0,36,557	0/0:19,0:19:27.09:0,27,431	0/0:25,0:25:32.87:0,33,475	0/0:8,0:7:15.04:0,15,215	0/0:10,0:10:12.04:0,12,193	0/0:13,0:10:27.01:0,27,338	0/0:18,0:17:38.98:0,39,517	0/0:8,0:8:17.93:0,18,316	0/0:12,0:12:15.05:0,15,262	0/0:14,0:14:14.83:0,15,249	0/1:11,0:8:9.62:10,0,49	0/0:22,0:22:38.66:0,39,668	0/0:17,0:16:48.12:0,48,706	0/0:27,0:25:64.73:0,65,838	0/0:7,0:6:15.04:0,15,191
chr10	22321932	.	C	CGT	885.09	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-0.075;DP=446;FS=0.000;HRun=0;HaplotypeScore=127.6782;InbreedingCoeff=0.8475;MQ=64.93;MQ0=11;MQRankSum=0.189;QD=24.59;ReadPosRankSum=1.447;VQSLOD=4.5886;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:13.86:0,14,169	0/0:6,0:6:13.83:0,14,143	0/0:20,0:10:22.41:0,22,339	0/0:41,0:27:46.69:0,47,758	0/0:19,0:19:45.14:0,45,602	0/0:24,0:24:41.52:0,42,526	0/0:10,0:10:21.06:0,21,291	0/0:27,0:26:75.22:0,75,967	0/0:6,0:4:12.04:0,12,164	0/0:24,0:24:72.20:0,72,899	0/0:20,0:19:36.73:0,37,381	0/0:10,0:10:21.27:0,21,290	0/0:17,0:16:20.24:0,20,333	0/0:23,0:23:45.58:0,46,559	1/1:13,2:15:32.32:477,32,0	1/1:18,3:21:38.60:529,39,0	0/0:6,0:6:15.05:0,15,198	0/0:5,0:5:12.04:0,12,156	0/0:15,0:13:36.11:0,36,477	0/0:20,0:20:46.90:0,47,583	0/0:7,0:7:15.05:0,15,218	0/0:10,0:10:18.04:0,18,255	0/0:13,0:13:24.07:0,24,314	0/0:5,0:4:3.01:0,3,38	0/0:25,0:25:62.90:0,63,848	0/0:16,0:15:45.14:0,45,592	0/0:21,0:19:54.14:0,54,671	0/0:9,0:8:20.80:0,21,282
chr10	22326172	.	TG	T	6131.80	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=10.509;DP=530;FS=2.559;HRun=1;HaplotypeScore=56.5656;InbreedingCoeff=0.9944;MQ=75.36;MQ0=0;MQRankSum=-0.025;QD=37.16;ReadPosRankSum=3.015;VQSLOD=5.3963;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:51.17:0,51,794	0/0:10,0:10:30.10:0,30,467	0/0:16,0:16:28.77:0,29,643	0/0:4,0:4:12.04:0,12,188	0/0:25,0:25:75.24:0,75,1149	1/1:0,19:19:51.17:712,51,0	1/1:0,16:16:39.13:545,39,0	0/0:34,0:34:99:0,102,1513	0/0:21,0:21:63.20:0,63,962	0/0:27,0:27:78.27:0,78,1221	0/0:26,0:26:78.21:0,78,1131	1/1:0,15:15:39.13:545,39,0	1/1:0,21:21:60.20:838,60,0	1/1:0,11:11:30.10:419,30,0	0/0:16,0:16:45.12:0,45,659	0/0:23,0:23:69.23:0,69,1077	0/0:18,0:18:54.16:0,54,820	0/0:19,0:19:57.09:0,57,835	0/0:20,0:20:60.16:0,60,912	0/0:25,0:25:75.23:0,75,1127	0/0:9,0:9:27.03:0,27,372	1/1:0,27:27:72.24:1005,72,0	1/1:0,29:29:78.26:1089,78,0	1/1:1,7:8:23.91:307,24,0	1/1:0,19:19:48.16:671,48,0	0/0:17,0:17:51.17:0,51,777	0/0:25,0:25:75.26:0,75,1173	0/0:13,0:13:39.13:0,39,608
chr10	22326524	.	C	CA	1097.84	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-2.670;DP=639;FS=6.460;HRun=0;HaplotypeScore=72.3868;InbreedingCoeff=0.9412;MQ=83.15;MQ0=0;MQRankSum=-1.488;QD=43.91;ReadPosRankSum=0.481;VQSLOD=3.9020;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,117,1634	0/0:3,0:3:9.03:0,9,126	0/0:30,0:29:81.22:0,81,1079	0/0:36,0:36:94.83:0,95,1247	1/1:3,22:25:75.26:1193,75,0	0/0:24,0:24:66.21:0,66,906	0/0:33,0:33:99:0,99,1366	0/0:40,0:40:99:0,120,1605	0/0:14,0:14:42.14:0,42,587	0/0:19,0:19:57.19:0,57,792	0/0:19,0:19:57.19:0,57,796	0/0:10,0:10:30.10:0,30,419	0/0:25,0:25:75.22:0,75,1013	0/0:37,0:37:99:0,111,1499	0/0:25,0:25:75.25:0,75,1049	0/0:20,0:20:54.17:0,54,738	0/0:22,0:22:63.21:0,63,881	0/0:15,0:15:45.13:0,45,610	0/0:25,0:25:72.23:0,72,977	0/0:17,0:17:51.16:0,51,691	0/0:28,0:28:84.27:0,84,1160	0/0:18,0:18:54.18:0,54,755	0/0:22,0:22:66.22:0,66,923	0/0:27,0:27:81.26:0,81,1112	0/0:23,0:23:69.22:0,69,949	0/0:22,0:22:66.22:0,66,923	0/0:14,0:14:42.13:0,42,570	0/0:7,0:7:21.07:0,21,294
chr10	22326642	.	GA	G	670.36	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.575;DP=714;FS=1.849;HRun=1;HaplotypeScore=100.2304;InbreedingCoeff=0.9449;MQ=74.00;MQ0=0;MQRankSum=-6.113;QD=23.94;ReadPosRankSum=-3.097;VQSLOD=2.8281;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,102,1607	0/0:12,0:12:33.10:0,33,503	0/0:37,0:36:99:0,102,1559	0/0:23,0:23:38.44:0,38,854	1/1:0,28:28:57.17:765,57,0	0/0:27,0:27:81.26:0,81,1267	0/0:32,0:32:96.33:0,96,1529	0/0:38,0:38:99:0,114,1779	0/0:17,0:17:51.17:0,51,809	0/0:40,0:40:99:0,120,1877	0/0:16,0:16:45.14:0,45,696	0/0:17,0:17:51.17:0,51,807	0/0:31,0:31:93.27:0,93,1416	0/0:37,0:37:99:0,111,1769	0/0:26,0:26:78.25:0,78,1218	0/0:18,0:18:54.17:0,54,838	0/0:27,0:27:81.24:0,81,1241	0/0:14,0:14:39.13:0,39,623	0/0:25,0:25:75.23:0,75,1136	0/0:24,0:24:66.20:0,66,1009	0/0:44,0:44:99:0,132,2030	0/0:23,0:23:69.22:0,69,1074	0/0:22,0:22:66.21:0,66,1030	0/0:23,0:23:69.24:0,69,1098	0/0:15,0:15:45.14:0,45,696	0/0:33,0:33:99:0,99,1563	0/0:26,0:26:78.27:0,78,1245	0/0:3,0:3:9.03:0,9,144
chr10	22329116	.	G	GT	2348.61	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-1.179;DP=542;FS=1.545;HRun=7;HaplotypeScore=95.0775;InbreedingCoeff=0.9937;MQ=76.10;MQ0=0;MQRankSum=-2.738;QD=30.11;ReadPosRankSum=3.457;VQSLOD=3.3779;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:30.51:0,31,290	0/0:8,0:8:24.02:0,24,225	0/0:20,0:19:35.35:0,35,400	0/0:12,0:12:23.92:0,24,208	0/0:27,0:27:75.08:0,75,715	0/0:27,0:27:78.11:0,78,746	0/0:7,0:7:21.03:0,21,203	0/0:25,0:25:69.07:0,69,647	0/0:6,0:6:18.03:0,18,174	0/0:34,0:34:93.14:0,93,896	0/0:27,0:27:75.10:0,75,713	0/0:14,0:14:36.53:0,37,348	0/0:20,0:20:60.10:0,60,578	0/0:12,0:12:33.05:0,33,318	0/0:17,0:17:51.06:0,51,481	0/0:22,0:22:60.08:0,60,575	0/0:24,0:24:56.74:0,57,544	0/0:15,0:15:39.06:0,39,376	0/0:14,0:14:36.05:0,36,343	0/0:24,0:24:69.09:0,69,659	0/0:17,0:17:51.08:0,51,492	0/0:20,0:20:56.88:0,57,533	0/0:21,0:21:56.83:0,57,523	0/0:12,0:12:32.71:0,33,296	0/0:24,0:24:65.78:0,66,587	1/1:4,34:38:76.61:1188,77,0	1/1:1,22:24:60.18:724,60,0	1/1:0,16:16:48.15:580,48,0
chr10	22329952	.	AT	A	5992.57	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=9.082;DP=591;FS=2.765;HRun=8;HaplotypeScore=119.8108;InbreedingCoeff=0.9892;MQ=79.34;MQ0=0;MQRankSum=-7.556;QD=25.39;ReadPosRankSum=1.601;VQSLOD=3.9997;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,14:15:36.05:347,36,0	0/0:9,0:9:20.78:0,21,140	0/0:16,0:17:8.99:0,9,241	0/0:14,0:15:35.26:0,35,382	1/1:0,24:24:66.10:636,66,0	1/1:3,27:30:78.12:753,78,0	1/1:3,22:25:63.09:608,63,0	0/0:30,0:30:78.23:0,78,932	0/0:23,0:23:59.44:0,59,420	0/0:25,0:25:66.19:0,66,787	0/0:26,0:26:78.21:0,78,910	1/1:4,21:25:60.09:579,60,0	1/1:2,25:27:63.10:608,63,0	1/1:1,24:25:72.11:694,72,0	0/0:24,0:24:69.20:0,69,822	0/0:25,0:25:72.22:0,72,869	0/0:23,0:23:62.49:0,62,451	0/0:7,0:7:17.90:0,18,137	0/0:17,0:17:38.24:0,38,236	0/0:29,0:29:77.27:0,77,545	0/0:20,0:20:56.41:0,56,385	1/1:0,24:24:69.11:666,69,0	1/1:0,18:18:54.09:521,54,0	1/1:0,8:8:24.04:232,24,0	1/1:3,12:15:36.05:348,36,0	0/0:30,0:30:84.26:0,84,1015	0/0:26,0:26:72.22:0,72,867	0/0:8,0:8:24.07:0,24,290
chr10	22330009	.	G	GAAAACCAAACTTTTGT	45635.84	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=3.490;DP=665;FS=0.000;HRun=0;HaplotypeScore=370.6069;InbreedingCoeff=0.9962;MQ=58.51;MQ0=0;MQRankSum=-19.066;QD=152.63;ReadPosRankSum=-1.072;VQSLOD=3.6806;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:16,5:20:14.25:2294,14,0	0/0:7,0:7:21.07:0,21,887	0/0:25,0:23:54.17:0,54,1797	0/0:16,0:14:35.78:0,36,992	1/1:22,12:35:78.27:5035,78,0	1/1:23,13:36:96.33:5813,96,0	1/1:20,3:23:60.14:2844,60,0	0/0:32,0:32:78.25:0,78,2883	0/0:20,0:20:51.18:0,51,2248	0/0:26,0:26:72.23:0,72,3098	0/0:19,0:19:39.13:0,39,1747	1/1:23,4:26:72.25:4625,72,0	1/1:24,8:33:84.24:4968,84,0	1/1:21,6:27:78.25:4544,78,0	0/0:29,0:29:84.29:0,84,3605	0/0:15,0:15:39.12:0,39,1548	0/0:17,0:17:48.16:0,48,2094	0/0:9,0:9:27.09:0,27,1131	0/0:21,0:21:28.64:0,29,1776	0/0:39,0:39:99:0,111,4446	0/0:16,0:16:36.11:0,36,1484	1/1:21,9:30:81.24:4636,81,0	1/1:18,12:30:81.28:4868,81,0	1/1:10,2:12:27.09:1595,27,0	1/1:14,11:24:66.23:4414,66,0	0/0:31,0:31:81.27:0,81,3416	0/0:30,0:30:75.26:0,75,3362	0/0:14,0:14:39.13:0,39,1376
chr10	22330031	.	G	GCAAA	13147.61	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-6.093;DP=659;FS=0.686;HRun=0;HaplotypeScore=211.5057;InbreedingCoeff=0.9813;MQ=57.83;MQ0=0;MQRankSum=-14.005;QD=50.57;ReadPosRankSum=0.832;VQSLOD=5.2826;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,7:18:32.96:609,33,0	0/0:1,0:12:21.02:0,21,196	0/0:40,0:33:68.53:0,69,867	0/0:20,0:19:11.72:0,12,401	1/1:10,15:25:48.12:1104,48,0	1/1:14,17:31:78.03:1573,78,0	1/1:5,14:19:44.18:1010,44,0	0/0:33,0:33:69.14:0,69,1112	0/0:4,0:27:47.67:0,48,530	0/0:33,0:33:78.25:0,78,1276	0/0:18,0:18:51.13:0,51,787	1/1:4,13:16:39.07:915,39,0	1/1:5,21:26:66.20:1591,66,0	1/1:2,22:27:63.22:1565,63,0	0/0:30,0:30:75.20:0,75,1164	0/0:18,0:18:51.16:0,51,838	0/0:4,0:15:26.06:0,26,229	0/0:2,0:8:7.07:0,7,129	0/0:2,0:16:26.56:0,27,289	0/0:4,0:40:69.74:0,70,812	0/0:3,0:18:27.03:0,27,252	1/1:4,26:30:75.26:1815,75,0	1/1:9,18:28:59.78:1384,60,0	1/1:3,11:17:20.93:409,21,0	1/1:7,15:21:52.37:1172,52,0	0/0:27,0:27:63.15:0,63,941	0/0:27,0:27:72.20:0,72,1141	0/0:16,0:16:48.16:0,48,792
chr10	22330491	.	T	TAAA	9142.64	PASS	AB=0.742;AC=41;AF=0.732;AN=56;BaseQRankSum=2.761;DP=639;FS=2.387;HRun=10;HaplotypeScore=98.3459;InbreedingCoeff=0.7402;MQ=73.69;MQ0=1;MQRankSum=0.088;QD=19.13;ReadPosRankSum=1.110;VQSLOD=3.0644;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,17:19:22.32:407,22,0	0/1:5,0:11:5.29:5,0,11	0/0:15,0:14:17.77:0,18,177	0/1:12,0:11:2.06:2,0,77	1/1:8,1:42:99:775,100,0	1/1:2,23:29:51.15:915,51,0	1/1:3,12:17:30.08:541,30,0	0/0:25,0:25:57.05:0,57,671	1/1:3,0:22:25.91:92,26,0	0/0:33,0:33:78.16:0,78,937	0/0:33,0:33:70.04:0,70,841	1/1:3,14:19:36.06:620,36,0	1/1:3,21:24:45.15:865,45,0	1/1:1,19:22:45.13:830,45,0	0/0:28,0:29:44.20:0,44,742	0/0:26,0:26:72.13:0,72,811	0/1:7,0:26:12.30:25,0,12	1/1:2,0:8:6.23:15,6,0	1/1:3,0:14:18.92:64,19,0	1/1:5,0:39:2.68:59,3,0	1/1:2,0:11:8.72:21,9,0	1/1:5,14:19:32.75:517,33,0	1/1:5,23:30:57.12:1005,57,0	1/1:3,9:15:24.08:462,24,0	1/1:1,25:32:52.36:878,52,0	1/1:4,0:23:53.84:428,54,0	1/1:1,0:31:62.76:479,63,0	1/1:3,0:12:17.93:137,18,0
chr10	22332176	.	C	CACCACATGGGTGCTAGAA	19376.51	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=5.036;DP=656;FS=10.834;HRun=0;HaplotypeScore=296.7639;InbreedingCoeff=0.8933;MQ=64.32;MQ0=0;MQRankSum=-13.511;QD=142.47;ReadPosRankSum=-2.275;VQSLOD=3.3200;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,138,6432	1/1:9,3:14:36.08:2376,36,0	0/1:8,0:8:12.76:13,0,236	0/0:9,0:8:21.07:0,21,585	0/0:19,0:19:54.17:0,54,2532	0/0:22,0:22:66.23:0,66,3131	0/0:21,0:21:60.19:0,60,2612	0/0:28,0:28:78.25:0,78,3189	1/1:12,11:27:60.16:4773,60,0	0/0:28,0:28:81.14:0,81,3485	0/0:22,0:22:63.22:0,63,2962	0/0:27,0:27:81.24:0,81,3546	0/0:29,0:29:81.28:0,81,3683	0/0:26,0:26:75.24:0,75,3404	0/0:31,0:31:90.31:0,90,4310	0/0:37,0:36:99:0,105,5173	1/1:10,4:15:42.10:3228,42,0	1/1:8,0:8:17.27:785,17,0	1/1:10,4:18:54.17:3321,54,0	1/1:20,5:29:69.06:3553,69,0	1/1:14,2:17:27.05:1328,27,0	0/0:23,0:23:69.22:0,69,2767	0/0:24,0:24:66.12:0,66,2827	0/0:35,0:35:99:0,105,5156	0/0:29,0:29:84.29:0,84,3904	0/0:34,0:34:99:0,99,4230	0/0:25,0:25:72.25:0,72,3429	0/0:2,0:2:6.02:0,6,207
chr10	22332877	.	CAAA	C	8425.10	PASS	AB=0.615;AC=51;AF=0.911;AN=56;BaseQRankSum=-3.186;DP=534;FS=5.492;HRun=12;HaplotypeScore=125.8269;InbreedingCoeff=0.5297;MQ=41.23;MQ0=21;MQRankSum=-1.304;QD=18.32;ReadPosRankSum=2.984;VQSLOD=3.3251;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:14,1:21:35.50:239,36,0	1/1:4,3:7:12.02:138,12,0	0/0:29,0:1:3.01:0,3,49	0/0:43,0:7:11.90:0,12,128	1/1:9,19:25:42.06:516,42,0	1/1:5,18:23:45.04:528,45,0	1/1:5,14:19:33.04:391,33,0	1/1:11,11:22:32.91:376,33,0	1/1:8,10:18:27.02:326,27,0	1/1:6,21:27:63.14:761,63,0	1/1:8,13:21:32.97:361,33,0	1/1:4,10:13:33.01:384,33,0	1/1:15,8:22:29.91:319,30,0	1/1:10,6:14:11.96:136,12,0	1/1:6,20:23:24.05:303,24,0	1/1:3,10:13:1.07:189,1,0	0/1:6,10:16:10.03:271,0,10	1/1:0,4:4:9.03:114,9,0	1/1:10,4:11:14.89:137,15,0	1/1:4,13:17:30.07:375,30,0	1/1:6,4:10:5.87:52,6,0	1/1:6,8:12:24.03:281,24,0	1/1:6,10:16:23.88:263,24,0	1/1:5,7:13:17.90:220,18,0	1/1:10,8:18:24:293,24,0	1/1:7,17:24:63.08:757,63,0	1/1:8,21:29:38.45:588,38,0	1/1:1,3:4:9.01:107,9,0
chr10	22332888	.	AAG	A	1405.74	PASS	AB=1.000;AC=28;AF=0.500;AN=56;BaseQRankSum=7.594;DP=568;FS=47.175;HRun=0;HaplotypeScore=154.9722;InbreedingCoeff=-0.2429;MQ=38.52;MQ0=26;MQRankSum=-7.011;QD=3.28;ReadPosRankSum=12.892;VQSLOD=0.2244;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:11,6:16:32.41:249,32,0	1/1:7,0:7:2.99:22,3,0	0/1:42,0:5:6.16:6,0,23	0/0:54,0:9:13.96:0,14,102	0/1:27,0:25:54.13:54,0,104	0/1:27,0:27:73.92:155,0,74	1/1:18,0:18:2.68:129,3,0	0/0:26,0:26:1.47:0,1,214	1/1:15,0:15:7.84:52,8,0	0/1:34,0:33:44.64:45,0,173	0/1:22,0:22:52.57:63,0,53	0/1:16,0:15:17.61:138,0,18	0/1:16,0:15:44.02:77,0,44	0/1:15,0:12:10.84:11,0,89	0/0:25,0:24:12.35:0,12,111	0/0:15,0:15:4.10:0,4,91	0/1:16,0:16:8.58:33,0,9	0/0:6,0:6:1.51:0,2,12	0/0:13,0:9:2.87:0,3,32	1/1:19,0:19:12.90:91,13,0	0/1:7,0:7:2.76:11,0,3	0/1:14,0:12:2.60:73,0,3	0/1:21,0:21:60.07:87,0,60	0/1:15,0:15:56.43:58,0,56	0/1:20,0:20:62.81:63,0,78	0/1:31,0:31:38.51:39,0,202	0/1:27,0:26:51.22:58,0,51	1/1:3,0:3:8.77:52,9,0
chr10	22332899	.	G	GA	3870.99	PASS	AB=1.000;AC=21;AF=0.389;AN=54;BaseQRankSum=-2.005;DP=603;FS=30.808;HRun=9;HaplotypeScore=152.5316;InbreedingCoeff=0.6906;MQ=39.23;MQ0=25;MQRankSum=-3.681;QD=15.42;ReadPosRankSum=-0.997;VQSLOD=1.4479;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:26:8.23:8,0,324	0/0:1,0:6:3.56:0,4,15	0/1:42,0:7:0.07:0,0,44	0/0:58,1:12:15.56:0,16,98	0/0:31,0:29:64.80:0,65,551	1/1:7,20:27:43.17:701,43,0	1/1:8,10:18:39.10:428,39,0	0/0:32,1:33:3.84:0,4,486	0/0:6,0:13:12.21:0,12,36	0/0:36,0:35:86.97:0,87,754	0/0:19,0:19:29.07:0,29,302	1/1:2,10:11:30.08:330,30,0	1/1:6,9:15:33.07:348,33,0	1/1:4,15:16:11.28:310,11,0	0/0:23,0:22:44.97:0,45,387	0/0:19,0:19:35.98:0,36,311	0/1:10,0:19:11.03:11,0,40	0/0:3,0:6:5.73:0,6,17	0/0:10,0:11:4.46:0,4,17	0/0:7,0:20:24.15:0,24,77	0/0:5,0:7:0.18:0,0,12	1/1:8,6:12:14.48:160,14,0	1/1:3,19:22:63.16:678,63,0	1/1:3,11:14:27.03:284,27,0	1/1:5,17:22:57.13:612,57,0	0/0:36,0:36:91.77:0,92,785	0/0:27,0:27:59.47:0,59,504	./.
chr10	22332904	.	A	AGT	666.51	PASS	AB=0.974;AC=14;AF=0.259;AN=54;BaseQRankSum=7.984;DP=610;FS=2.065;HRun=0;HaplotypeScore=173.6606;InbreedingCoeff=0.7389;MQ=39.70;MQ0=26;MQRankSum=-4.695;QD=5.42;ReadPosRankSum=1.447;VQSLOD=3.4767;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:29:68.03:0,68,968	1/1:5,1:6:7.63:47,8,0	0/1:45,0:7:11.43:11,0,88	0/0:60,0:12:26.22:0,26,193	0/0:33,0:32:81.19:0,81,1236	0/0:24,0:24:69.03:0,69,651	0/0:17,0:17:42.03:0,42,398	0/0:35,0:34:90.19:0,90,1313	1/1:7,3:10:14.10:180,14,0	0/0:36,0:35:96.33:0,96,1559	0/0:20,0:20:48.16:0,48,775	0/0:12,0:11:30.01:0,30,270	0/0:14,0:14:35.97:0,36,314	0/0:20,0:18:41.98:0,42,409	0/0:24,0:23:45.15:0,45,734	0/0:22,0:22:51.17:0,51,792	1/1:18,1:19:10.82:177,11,0	1/1:4,1:5:10.36:87,10,0	1/1:12,2:10:13.96:128,14,0	0/1:17,1:17:18.30:141,0,18	1/1:3,3:6:3.60:68,4,0	0/0:14,0:12:27.05:0,27,313	0/0:23,0:23:68.90:0,69,602	0/0:15,0:15:29.96:0,30,266	0/0:22,0:22:63.01:0,63,576	0/0:37,0:37:99:0,111,1753	0/0:30,0:29:72.22:0,72,1120	./.
chr10	22332920	.	GA	G	9608.35	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=2.880;DP=643;FS=23.281;HRun=10;HaplotypeScore=131.7915;InbreedingCoeff=0.9271;MQ=53.96;MQ0=15;MQRankSum=-4.018;QD=19.33;ReadPosRankSum=3.073;VQSLOD=3.8726;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,30:33:65.96:573,66,0	1/1:1,7:8:20.98:181,21,0	0/0:43,0:18:29.53:0,30,269	0/0:52,0:11:17.08:0,17,168	1/1:5,31:36:61.27:657,61,0	1/1:0,22:22:65.99:573,66,0	1/1:1,16:17:29.96:260,30,0	1/1:11,28:38:83.95:722,84,0	1/1:0,13:13:38.99:338,39,0	1/1:5,35:39:99:911,105,0	1/1:3,22:25:56.98:493,57,0	1/1:1,12:13:23.99:208,24,0	1/1:2,13:15:26.03:277,26,0	1/1:7,11:16:26.98:234,27,0	0/0:28,0:27:60.15:0,60,656	0/0:21,2:23:8.02:0,8,528	1/1:2,20:22:44.82:390,45,0	1/1:2,7:9:17.99:156,18,0	1/1:3,10:12:23.97:203,24,0	1/1:3,17:19:44.97:390,45,0	1/1:5,4:9:8.92:78,9,0	1/1:1,11:12:26.99:234,27,0	1/1:5,21:26:59.96:517,60,0	1/1:1,14:15:35.98:310,36,0	1/1:1,24:25:59.98:521,60,0	1/1:5,30:35:88.21:758,88,0	1/1:4,25:29:65.97:573,66,0	1/1:0,3:3:6:52,6,0
chr10	22333396	.	AAAC	A	4962.49	PASS	AB=0.875;AC=23;AF=0.411;AN=56;BaseQRankSum=-3.487;DP=621;FS=9.042;HRun=0;HaplotypeScore=150.5880;InbreedingCoeff=0.8650;MQ=71.67;MQ0=2;MQRankSum=-2.547;QD=20.42;ReadPosRankSum=2.109;VQSLOD=4.3048;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:17:11.90:0,12,126	1/1:2,0:6:11.90:84,12,0	0/0:35,0:28:24.07:0,24,381	0/0:23,0:19:15.04:0,15,237	0/0:10,0:37:54.53:0,55,556	0/0:8,0:27:51.17:0,51,667	0/0:10,0:22:27.09:0,27,377	1/1:15,18:33:54.16:709,54,0	1/1:2,0:14:35.71:252,36,0	1/1:10,23:33:69.23:944,69,0	1/1:5,20:25:48.11:625,48,0	0/0:7,0:18:33.09:0,33,414	0/0:9,0:24:45.13:0,45,577	0/0:8,0:25:45.14:0,45,578	1/1:3,21:24:54.18:741,54,0	1/1:6,28:34:22.27:1012,22,0	1/1:9,0:12:8.93:63,9,0	0/1:12,0:14:30.02:30,0,39	1/1:11,0:17:17.86:126,18,0	1/1:9,0:25:47.62:335,48,0	1/1:4,0:6:5.95:42,6,0	0/0:7,0:22:51.06:0,51,637	0/0:9,0:27:53.69:0,54,682	0/0:10,0:29:48.16:0,48,640	0/0:8,0:23:45.13:0,45,576	0/0:7,0:20:39.60:0,40,536	0/0:9,0:22:27.06:0,27,344	0/0:5,0:7:3.01:0,3,39
chr10	22333447	.	TAAGA	T	4544.96	PASS	AB=0.552;AC=13;AF=0.232;AN=56;BaseQRankSum=8.589;DP=651;FS=21.375;HRun=0;HaplotypeScore=158.9759;InbreedingCoeff=0.8997;MQ=71.89;MQ0=1;MQRankSum=-9.373;QD=44.56;ReadPosRankSum=0.253;VQSLOD=3.5950;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:48.11:0,48,1223	1/1:1,10:11:30.10:581,30,0	0/0:26,0:26:72.24:0,72,1845	0/0:22,0:22:60.01:0,60,1411	0/0:40,0:40:99:0,99,2619	0/0:30,0:30:81.24:0,81,2083	0/0:21,0:21:51.18:0,51,1397	0/0:45,0:45:99:0,129,3317	1/1:3,15:18:54.01:922,54,0	0/0:31,0:31:87.27:0,87,2158	0/0:21,0:21:57.07:0,57,1313	0/0:21,0:21:57.18:0,57,1504	0/0:25,0:25:63.22:0,63,1718	0/0:20,0:20:54.17:0,54,1372	0/0:32,0:32:90.31:0,90,2432	0/0:29,0:29:84.23:0,84,2040	0/1:3,13:16:6.31:602,0,6	1/1:2,4:5:12:194,12,0	1/1:1,14:15:42.05:626,42,0	1/1:2,26:28:75.03:1329,75,0	1/1:0,8:8:15.05:290,15,0	0/0:22,0:22:66.21:0,66,1712	0/0:26,0:26:57.18:0,57,1496	0/0:24,0:24:72.21:0,72,1856	0/0:24,0:24:69.22:0,69,1833	0/0:32,0:32:90.30:0,90,2412	0/0:34,0:34:90.29:0,90,2406	0/0:3,0:3:9.03:0,9,246
chr10	22333715	.	GTATC	G	2752.52	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=7.960;DP=597;FS=7.319;HRun=0;HaplotypeScore=102.3044;InbreedingCoeff=0.9862;MQ=79.20;MQ0=0;MQRankSum=-1.246;QD=43.01;ReadPosRankSum=0.372;VQSLOD=3.6322;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:27.09:0,27,727	0/0:8,0:8:21.07:0,21,567	0/0:20,0:20:52.73:0,53,1325	0/0:14,0:12:36.12:0,36,928	0/0:38,0:38:99:0,105,2791	0/0:27,0:27:75.26:0,75,1993	0/0:9,0:9:27.08:0,27,673	0/0:34,0:34:96.33:0,96,2542	0/0:15,0:15:45.15:0,45,1213	0/0:31,0:31:93.32:0,93,2488	0/0:26,0:26:75.26:0,75,2022	0/0:21,0:21:63.22:0,63,1662	0/0:31,0:31:90.31:0,90,2377	0/0:25,0:25:75.26:0,75,1998	0/0:23,0:23:63.22:0,63,1701	0/0:26,0:26:78.27:0,78,2101	0/0:13,0:13:36.06:0,36,908	0/0:14,0:14:33.09:0,33,832	0/0:19,0:19:48.13:0,48,1181	0/0:28,0:28:84.29:0,84,2200	0/0:14,0:14:39.13:0,39,1052	0/0:23,0:23:69.24:0,69,1862	0/0:24,0:24:66.23:0,66,1782	0/0:9,0:9:27.09:0,27,705	0/0:26,0:26:78.27:0,78,2104	1/1:2,22:24:66.23:1240,66,0	1/1:3,31:34:75.26:1424,75,0	1/1:0,6:6:12.04:228,12,0
chr10	22334146	.	CA	C	4331.29	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=15.265;DP=680;FS=7.454;HRun=3;HaplotypeScore=77.5092;InbreedingCoeff=0.9992;MQ=59.23;MQ0=0;MQRankSum=0.564;QD=34.93;ReadPosRankSum=1.196;VQSLOD=5.3533;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,105,1467	1/1:0,7:7:21.07:260,21,0	0/0:23,0:17:48.13:0,48,659	0/0:29,0:27:78.25:0,78,1072	0/0:30,0:30:84.28:0,84,1210	0/0:33,0:33:96.30:0,96,1346	0/0:19,0:19:54.15:0,54,740	0/0:39,0:39:99:0,114,1611	1/1:0,19:19:57.18:706,57,0	0/0:23,0:23:69.23:0,69,994	0/0:23,0:23:66.22:0,66,948	0/0:23,0:23:69.22:0,69,973	0/0:20,0:20:60.20:0,60,864	0/0:21,0:21:63.20:0,63,891	0/0:26,0:26:75.17:0,75,1020	0/0:15,0:15:45.15:0,45,647	1/1:0,22:22:60.19:743,60,0	1/1:1,18:19:51.16:632,51,0	1/1:0,21:21:63.14:763,63,0	1/1:1,22:23:63.20:781,63,0	1/1:0,13:13:36.11:446,36,0	0/0:21,0:21:60.20:0,60,864	0/0:36,0:36:99:0,105,1511	0/0:18,0:18:51.17:0,51,734	0/0:33,0:33:96.28:0,96,1343	0/0:30,0:30:84.27:0,84,1193	0/0:38,0:38:99:0,114,1595	0/0:20,0:20:59.99:0,60,833
chr10	22334341	.	TACACAC	T	2362.05	PASS	AB=0.871;AC=35;AF=0.729;AN=48;BaseQRankSum=1.195;DP=578;FS=0.000;HRun=0;HaplotypeScore=145.3513;InbreedingCoeff=0.3403;MQ=54.37;MQ0=19;MQRankSum=-1.948;QD=5.36;ReadPosRankSum=0.068;VQSLOD=2.5310;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:4.37:0,4,66	0/1:5,3:8:0.06:56,0,0	./.	./.	0/1:23,0:35:25.42:25,0,33	0/1:25,1:25:4.69:103,0,5	1/1:24,0:24:14.32:197,14,0	0/0:26,0:24:5.82:0,6,33	1/1:14,0:14:5.30:49,5,0	0/0:22,0:20:28.19:0,28,376	0/0:12,0:12:15.82:0,16,302	1/1:14,3:16:7.30:182,7,0	1/1:28,2:29:20.16:241,20,0	0/1:21,1:23:24.33:95,0,24	1/1:10,0:29:15.05:209,15,0	1/1:15,0:33:8.89:126,9,0	0/1:23,0:22:17.80:54,0,18	1/1:8,0:8:6.43:72,6,0	1/1:18,0:17:9.30:39,9,0	1/1:7,9:16:11.93:178,12,0	1/1:29,0:28:11.78:68,12,0	1/1:24,1:25:9.02:134,9,0	1/1:12,12:23:15.51:284,16,0	1/1:14,1:14:2.97:61,3,0	1/1:16,10:26:9.03:175,9,0	./.	1/1:12,0:12:12.04:167,12,0	./.
chr10	22334931	.	GA	G	7945.57	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=21.139;DP=763;FS=22.279;HRun=4;HaplotypeScore=137.4169;InbreedingCoeff=0.9973;MQ=66.80;MQ0=0;MQRankSum=-3.556;QD=32.70;ReadPosRankSum=1.157;VQSLOD=2.7227;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,99,1348	1/1:1,8:9:24.07:288,24,0	0/0:30,0:29:74.60:0,75,974	0/0:30,0:30:78.12:0,78,1037	0/0:33,0:33:99:0,99,1365	0/0:30,0:30:87.28:0,87,1195	0/0:20,0:20:54.17:0,54,741	1/1:0,34:34:99:1224,102,0	1/1:1,25:26:75.23:896,75,0	1/1:4,37:40:99:1224,102,0	1/1:0,23:23:63.19:755,63,0	0/0:27,0:27:78.24:0,78,1042	0/0:30,0:30:87.28:0,87,1202	0/0:31,0:31:87.29:0,87,1218	0/0:35,0:35:99:0,102,1412	0/0:29,0:29:84.28:0,84,1173	1/1:0,22:22:63.19:756,63,0	1/1:0,11:11:30.09:358,30,0	1/1:2,17:19:48.15:574,48,0	1/1:0,36:36:99:1295,108,0	1/1:3,19:22:48.15:576,48,0	0/0:31,0:31:90.30:0,90,1259	0/0:26,0:26:75.24:0,75,1033	0/0:33,0:33:93.27:0,93,1236	0/0:23,0:23:69.21:0,69,947	0/0:30,1:31:57.74:0,58,1211	0/0:42,0:41:99:0,108,1507	0/0:5,0:5:15.05:0,15,210
chr10	22335334	.	T	TA	4498.18	PASS	AB=0.632;AC=19;AF=0.339;AN=56;BaseQRankSum=-10.550;DP=586;FS=0.358;HRun=10;HaplotypeScore=66.4881;InbreedingCoeff=0.9382;MQ=64.91;MQ0=0;MQRankSum=-2.597;QD=22.27;ReadPosRankSum=-0.778;VQSLOD=5.3495;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,1:21:18.64:0,19,360	1/1:2,8:10:18.05:192,18,0	0/0:12,0:8:20.94:0,21,167	0/0:14,0:13:32.40:0,32,246	0/0:26,0:26:74.89:0,75,613	0/0:23,0:24:64.93:0,65,520	0/0:17,0:17:41.91:0,42,338	1/1:13,16:29:19.66:389,20,0	1/1:2,25:27:70.42:739,70,0	1/1:6,32:37:93.19:978,93,0	1/1:5,13:18:39.10:416,39,0	0/0:11,0:12:32:0,32,252	0/0:25,0:25:56.88:0,57,461	0/0:21,0:21:50.90:0,51,413	0/0:27,0:28:67.90:0,68,542	0/0:22,0:22:59.89:0,60,486	1/1:2,10:12:30.08:320,30,0	0/1:5,7:12:2.70:172,0,3	1/1:3,13:17:20.28:396,20,0	1/1:7,18:26:53.93:545,54,0	1/1:0,13:13:33.08:352,33,0	0/0:12,0:12:29.96:0,30,246	0/0:24,0:24:67.93:0,68,542	0/0:18,0:18:50.93:0,51,417	0/0:35,0:37:81.22:0,81,651	0/0:24,1:25:18.91:0,19,360	0/0:42,0:42:99:0,108,871	0/0:4,0:4:11.99:0,12,99
chr10	22335871	.	CA	C	1247.51	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=4.710;DP=605;FS=1.870;HRun=8;HaplotypeScore=78.3086;InbreedingCoeff=0.9984;MQ=73.08;MQ0=0;MQRankSum=-1.318;QD=18.62;ReadPosRankSum=2.285;VQSLOD=3.7719;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:54.17:0,54,652	0/0:11,0:11:30.09:0,30,362	0/0:15,0:15:27.53:0,28,297	0/0:20,0:18:42.93:0,43,413	0/0:35,0:35:99:0,99,1190	0/0:17,0:17:48.15:0,48,580	0/0:14,0:14:39.12:0,39,471	0/0:29,0:29:81.22:0,81,939	0/0:18,0:18:42.13:0,42,507	0/0:30,0:30:87.26:0,87,1040	0/0:19,0:19:51.14:0,51,596	0/0:17,0:17:48.12:0,48,565	0/0:16,0:16:45.14:0,45,544	0/0:25,0:25:66.17:0,66,764	0/0:24,0:24:69.16:0,69,805	0/0:22,0:22:60.18:0,60,715	0/0:16,0:16:39.11:0,39,459	0/0:10,0:10:24.05:0,24,273	0/0:30,0:30:87.26:0,87,1041	0/0:40,0:40:99:0,117,1399	0/0:12,0:12:33.09:0,33,388	0/0:25,0:25:72.22:0,72,867	0/0:31,0:32:90.10:0,90,1031	0/0:13,0:13:33.10:0,33,399	0/0:28,0:28:78.24:0,78,942	1/1:3,23:26:63.09:608,63,0	1/1:8,19:27:48.07:463,48,0	1/1:3,11:14:33.04:319,33,0
chr10	22336396	.	AG	A	1702.89	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=6.153;DP=581;FS=10.468;HRun=1;HaplotypeScore=57.6301;InbreedingCoeff=0.9935;MQ=87.68;MQ0=0;MQRankSum=-2.118;QD=36.23;ReadPosRankSum=2.663;VQSLOD=3.4082;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:69.24:0,69,1093	0/0:9,0:9:27.09:0,27,431	0/0:21,0:21:57.71:0,58,892	0/0:19,0:19:53.92:0,54,741	0/0:25,0:25:75.24:0,75,1167	0/0:27,0:27:81.26:0,81,1259	0/0:18,0:18:54.18:0,54,852	0/0:36,0:36:99:0,108,1662	0/0:17,0:17:48.15:0,48,744	0/0:16,0:16:48.16:0,48,766	0/0:12,0:12:33.11:0,33,527	0/0:31,0:31:93.32:0,93,1486	0/0:35,0:35:99:0,102,1607	0/0:16,0:16:48.16:0,48,765	0/0:32,0:32:96.31:0,96,1510	0/0:25,0:25:75.18:0,75,1139	0/0:18,0:18:54.08:0,54,799	0/0:5,0:5:15.01:0,15,211	0/0:17,0:17:51.11:0,51,761	0/0:22,0:22:66.23:0,66,1054	0/0:27,0:27:81.25:0,81,1266	0/0:22,0:22:66.23:0,66,1052	0/0:17,0:17:48.16:0,48,761	0/0:20,0:20:60.20:0,60,959	0/0:23,0:23:69.22:0,69,1071	1/1:0,20:20:60.20:839,60,0	1/1:0,18:18:45.15:629,45,0	1/1:0,9:9:27.09:377,27,0
chr10	22337195	.	C	CA	19035.09	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-4.488;DP=522;FS=4.291;HRun=3;HaplotypeScore=56.9565;InbreedingCoeff=0.8891;MQ=69.11;MQ0=0;MQRankSum=-5.665;QD=37.47;ReadPosRankSum=3.094;VQSLOD=5.4228;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,11:12:33.06:439,33,0	1/1:0,6:6:18.06:251,18,0	0/0:11,0:11:27.08:0,27,312	0/0:3,0:3:5.99:0,6,50	1/1:1,40:41:99:1512,108,0	1/1:0,17:17:51.17:714,51,0	1/1:0,15:15:42.14:588,42,0	1/1:3,32:35:96.32:1344,96,0	1/1:5,23:28:75.23:1028,75,0	1/1:2,23:25:72.24:1004,72,0	1/1:4,19:23:57.19:798,57,0	1/1:0,21:21:60.20:840,60,0	1/1:1,27:28:66.22:924,66,0	1/1:2,19:21:57.19:793,57,0	1/1:0,26:26:72.24:1008,72,0	1/1:0,15:15:39.13:546,39,0	1/1:0,5:5:12:142,12,0	1/1:0,4:4:12.04:168,12,0	1/1:2,12:14:42.10:552,42,0	1/1:1,31:32:93.31:1300,93,0	1/1:2,11:13:36.58:485,37,0	1/1:0,12:12:33.11:462,33,0	1/1:0,19:19:45.15:630,45,0	1/1:3,9:12:18.06:252,18,0	1/1:2,18:20:54.18:756,54,0	1/1:3,26:29:78.24:1074,78,0	1/1:1,30:31:90.30:1259,90,0	1/1:0,4:4:12.04:168,12,0
chr10	22337241	.	CA	C	3665.81	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=5.838;DP=510;FS=1.869;HRun=2;HaplotypeScore=91.6460;InbreedingCoeff=0.9618;MQ=72.11;MQ0=0;MQRankSum=-6.221;QD=35.59;ReadPosRankSum=-1.196;VQSLOD=3.4717;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:30.10:0,30,447	1/1:0,8:8:24.08:308,24,0	0/0:12,0:12:36.12:0,36,523	0/0:5,0:5:3.03:0,3,144	0/0:43,0:43:99:0,129,1933	0/0:15,0:15:45.15:0,45,675	0/0:17,0:17:45.15:0,45,675	0/0:29,0:29:87.29:0,87,1286	1/1:0,19:19:54.17:697,54,0	0/0:29,0:29:87.29:0,87,1304	0/0:23,0:23:69.23:0,69,1032	0/0:18,0:18:51.17:0,51,764	0/0:21,0:21:60.19:0,60,879	0/0:26,0:26:78.25:0,78,1149	0/0:19,0:19:54.18:0,54,809	0/0:16,0:15:48.16:0,48,720	1/1:1,6:7:15.05:191,15,0	1/1:0,8:8:24.08:311,24,0	1/1:1,17:18:51.16:649,51,0	1/1:1,32:33:93.28:1178,93,0	1/1:2,8:10:27.07:331,27,0	0/0:11,0:11:30.10:0,30,449	0/0:23,0:22:60.20:0,60,897	0/0:5,0:5:15.05:0,15,225	0/0:18,0:18:54.18:0,54,809	0/0:24,0:24:69.23:0,69,1017	0/0:33,0:32:96.33:0,96,1437	0/0:10,0:10:27.09:0,27,405
chr10	22338482	.	TACACACACACACAC	T	5293.64	PASS	AB=0.737;AC=27;AF=0.587;AN=46;BaseQRankSum=7.371;DP=696;FS=9.929;HRun=0;HaplotypeScore=250.4273;InbreedingCoeff=0.7580;MQ=52.34;MQ0=25;MQRankSum=-7.355;QD=14.31;ReadPosRankSum=-0.771;VQSLOD=1.8845;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:54.16:0,54,2251	1/1:8,0:18:14.99:486,15,0	./.	./.	1/1:18,0:34:0.44:280,0,0	1/1:21,13:34:14.96:362,15,0	1/1:18,10:29:6.02:150,6,0	0/0:31,0:30:24.83:0,25,552	1/1:8,0:24:15.05:488,15,0	0/0:20,0:27:48.16:0,48,2163	0/0:21,0:23:35.70:0,36,1605	1/1:18,7:23:3.01:117,3,0	1/1:9,17:27:31.85:1014,32,0	1/1:23,2:25:17.86:365,18,0	0/0:16,0:22:24.53:0,25,546	0/0:18,0:26:30.09:0,30,969	./.	./.	1/1:8,0:12:1.38:96,1,0	1/1:15,0:30:24.08:721,24,0	./.	1/1:17,11:28:9.97:300,10,0	1/1:18,10:27:8.96:222,9,0	0/1:18,10:28:11.72:99,0,12	1/1:12,12:23:26.43:594,26,0	0/0:22,0:26:42.14:0,42,1454	0/0:20,0:20:36.11:0,36,985	0/0:4,0:6:12.04:0,12,473
chr10	22338837	.	G	GT	8741.39	PASS	AB=0.737;AC=27;AF=0.482;AN=56;BaseQRankSum=-8.722;DP=678;FS=4.005;HRun=9;HaplotypeScore=71.0752;InbreedingCoeff=0.9045;MQ=74.26;MQ0=0;MQRankSum=-0.311;QD=24.21;ReadPosRankSum=-0.557;VQSLOD=5.5003;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:89.98:0,90,781	1/1:3,11:14:30.08:332,30,0	0/0:15,0:15:24.74:0,25,229	0/0:18,0:18:32.97:0,33,282	1/1:8,2:47:99:581,104,0	0/0:24,0:24:59.97:0,60,521	0/0:14,0:14:35.95:0,36,305	1/1:6,20:26:51.14:564,51,0	1/1:3,21:24:66.18:728,66,0	1/1:1,37:38:99:1161,110,0	1/1:0,21:20:60.16:662,60,0	0/0:26,0:26:65.97:0,66,573	0/0:26,0:26:65.98:0,66,573	0/0:20,0:20:47.98:0,48,417	0/0:13,0:13:32.98:0,33,287	0/0:18,0:18:50.97:0,51,439	1/1:1,20:21:54.15:597,54,0	1/1:2,10:12:18.05:198,18,0	1/1:4,21:26:66.05:711,66,0	1/1:5,33:39:90.04:963,90,0	1/1:2,10:12:1.02:239,1,0	0/0:33,0:33:92.98:0,93,807	0/0:19,1:20:20.83:0,21,405	0/0:25,0:25:71.96:0,72,621	0/0:28,0:28:71.98:0,72,625	1/1:3,32:35:96.25:1054,96,0	1/1:4,28:32:52.16:804,52,0	0/1:9,5:14:8.01:148,0,8
chr10	22341213	.	TTCTCTC	T	2042.97	PASS	AB=0.741;AC=16;AF=0.308;AN=52;BaseQRankSum=-0.448;DP=566;FS=0.810;HRun=0;HaplotypeScore=128.9902;InbreedingCoeff=0.6004;MQ=69.29;MQ0=21;MQRankSum=-4.897;QD=11.35;ReadPosRankSum=1.903;VQSLOD=2.8979;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:28:30.20:0,30,807	0/0:7,0:7:2.38:0,2,23	./.	./.	0/0:27,0:28:2.51:0,3,69	0/1:16,3:18:7.69:191,0,8	1/1:18,7:25:1.97:132,2,0	0/0:24,0:21:2.90:0,3,16	0/0:16,0:18:8.53:0,9,385	0/0:14,0:14:5.51:0,6,35	0/0:15,0:15:12.01:0,12,158	1/1:8,12:20:21.07:406,21,0	1/1:15,6:21:1.88:510,2,0	1/1:14,4:18:29.97:444,30,0	0/0:24,0:24:18.06:0,18,400	0/0:28,0:28:15.94:0,16,372	0/0:28,0:28:14.98:0,15,233	0/0:5,0:5:6.02:0,6,80	0/0:15,0:15:9.89:0,10,135	0/0:13,0:13:9.49:0,9,153	0/0:18,0:21:18.04:0,18,287	0/1:5,8:13:0.11:0,0,1	1/1:9,8:18:8.89:97,9,0	1/1:22,1:23:12.01:157,12,0	1/1:14,4:18:17.97:271,18,0	0/0:18,0:21:31.60:0,32,540	0/0:19,0:19:6.02:0,6,144	0/0:10,0:7:3.01:0,3,75
chr10	22341222	.	T	TCTCG	842.33	PASS	AB=1.000;AC=10;AF=0.179;AN=56;BaseQRankSum=0.779;DP=571;FS=7.440;HRun=0;HaplotypeScore=125.1024;InbreedingCoeff=0.3772;MQ=57.94;MQ0=28;MQRankSum=-0.036;QD=5.43;ReadPosRankSum=4.344;VQSLOD=1.8506;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:34:74.26:0,74,788	0/0:7,0:7:6.44:0,6,47	0/0:22,0:7:14.91:0,15,125	0/0:27,0:13:19.90:0,20,202	0/0:31,0:29:41.51:0,42,348	0/0:22,0:22:20.61:0,21,333	0/0:21,0:20:44.78:0,45,354	0/0:19,0:16:47.87:0,48,412	0/1:18,0:17:27.80:28,0,166	0/0:15,0:14:32.92:0,33,311	0/0:16,0:16:23.61:0,24,177	0/0:23,0:22:44.08:0,44,374	0/0:23,0:22:1.57:0,2,390	0/0:22,0:19:42.29:0,42,429	1/1:2,22:25:18.06:450,18,0	1/1:5,21:28:14.64:343,15,0	0/1:28,0:28:48.97:49,0,238	0/0:5,0:4:11.90:0,12,88	0/0:18,0:17:18.81:0,19,305	0/0:14,0:14:4.96:0,5,109	0/0:21,0:20:16.12:0,16,132	0/0:11,0:11:14.78:0,15,96	0/0:17,0:17:47.49:0,47,338	0/0:28,0:27:51.74:0,52,482	0/0:17,0:17:42.53:0,43,306	0/1:19,0:18:24.56:25,0,225	0/1:27,0:27:15.94:69,0,16	1/1:10,0:7:3:29,3,0
chr10	22341226	.	T	TCTCTCG	852.08	PASS	AB=1.000;AC=12;AF=0.214;AN=56;BaseQRankSum=1.361;DP=567;FS=7.191;HRun=0;HaplotypeScore=138.2715;InbreedingCoeff=0.3150;MQ=53.75;MQ0=28;MQRankSum=0.311;QD=4.22;ReadPosRankSum=5.724;VQSLOD=1.0903;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:35:74.80:0,75,785	0/0:6,0:6:5.99:0,6,50	0/0:20,0:5:2.13:0,2,45	0/0:25,0:10:14.94:0,15,148	0/1:27,0:25:0.72:1,0,277	0/0:23,0:22:24.71:0,25,323	0/0:21,0:20:38.80:0,39,322	0/0:19,0:16:38.82:0,39,324	0/1:18,0:17:78.66:79,0,157	0/0:16,0:15:33.18:0,33,283	0/0:15,0:15:16.05:0,16,147	0/0:25,0:24:50.83:0,51,484	0/0:23,0:22:28.79:0,29,414	0/0:22,0:19:26.55:0,27,457	0/1:25,0:25:4.40:83,0,4	0/1:23,0:23:6.40:45,0,6	0/1:27,0:27:99:105,0,178	0/0:5,0:4:7.76:0,8,69	0/0:18,0:17:36.86:0,37,304	0/0:13,0:13:3.71:0,4,106	0/1:21,0:20:9.56:10,0,66	0/0:12,0:12:15.74:0,16,110	0/0:17,0:17:39.92:0,40,272	0/0:30,0:30:54.04:0,54,532	0/0:17,0:17:34.18:0,34,305	1/1:19,0:18:32.55:426,33,0	1/1:3,26:30:5.91:148,6,0	1/1:4,7:8:3.01:104,3,0
chr10	22342867	.	ATCT	A	1735.50	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=8.458;DP=677;FS=5.008;HRun=0;HaplotypeScore=93.7306;InbreedingCoeff=0.9826;MQ=82.85;MQ0=0;MQRankSum=-5.070;QD=32.14;ReadPosRankSum=2.483;VQSLOD=4.1555;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,52:54:99:1830,111,0	0/0:11,0:11:33.11:0,33,747	0/0:21,0:21:37.19:0,37,847	0/0:18,0:18:35.79:0,36,568	0/0:33,0:33:99:0,99,2212	0/0:35,0:35:99:0,105,2252	0/0:21,0:21:60.19:0,60,1317	0/0:30,0:30:87.29:0,87,1907	0/0:25,0:25:75.26:0,75,1683	0/0:20,0:20:60.19:0,60,1280	0/0:12,0:12:30.10:0,30,658	0/0:30,0:30:84.29:0,84,1897	0/0:21,0:21:60.19:0,60,1296	0/0:34,0:34:96.32:0,96,2134	0/0:28,0:28:84.29:0,84,1904	0/0:31,0:31:90.31:0,90,2008	0/0:26,0:26:78.27:0,78,1747	0/0:9,0:9:27.09:0,27,599	0/0:23,0:23:60.16:0,60,1204	0/0:21,0:21:63.22:0,63,1427	0/0:29,0:29:75.26:0,75,1699	0/0:20,0:20:60.21:0,60,1356	0/0:19,0:19:57.20:0,57,1292	0/0:22,0:22:66.23:0,66,1468	0/0:24,0:24:72.25:0,72,1631	0/0:32,0:32:96.33:0,96,2176	0/0:23,0:23:66.23:0,66,1489	0/0:5,0:5:15.05:0,15,340
chr10	22344213	.	T	TG	6150.04	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-13.878;DP=746;FS=0.343;HRun=1;HaplotypeScore=71.3440;InbreedingCoeff=0.9996;MQ=92.59;MQ0=0;MQRankSum=-4.067;QD=39.42;ReadPosRankSum=2.925;VQSLOD=5.5269;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:72.19:0,72,904	1/1:0,8:8:24.08:360,24,0	0/0:31,0:31:87.28:0,87,1109	0/0:36,0:36:99:0,102,1268	0/0:32,0:32:93.29:0,93,1191	0/0:22,0:22:66.20:0,66,842	0/0:25,0:25:72.22:0,72,920	0/0:39,0:39:99:0,111,1429	1/1:2,22:24:63.21:944,63,0	0/0:29,0:29:78.24:0,78,998	0/0:22,0:22:63.20:0,63,815	0/0:32,0:32:90.28:0,90,1153	0/0:26,0:26:78.25:0,78,1010	0/0:36,0:36:99:0,108,1388	0/0:35,0:35:99:0,102,1309	0/0:23,0:22:69.22:0,69,891	1/1:1,25:26:75.25:1124,75,0	1/1:1,19:20:57.19:854,57,0	1/1:1,19:20:57.19:851,57,0	1/1:0,33:33:78.18:1118,78,0	1/1:0,25:25:60.20:899,60,0	0/0:28,0:28:84.22:0,84,1056	0/0:30,0:30:87.28:0,87,1128	0/0:20,0:20:60.17:0,60,763	0/0:19,0:19:54.16:0,54,685	0/0:29,0:29:75.20:0,75,922	0/0:33,0:33:99:0,99,1270	0/0:13,0:13:36.12:0,36,467
chr10	22345020	.	GACACACAC	G	3726.43	PASS	AB=0.762;AC=13;AF=0.232;AN=56;BaseQRankSum=4.701;DP=657;FS=5.734;HRun=0;HaplotypeScore=181.3276;InbreedingCoeff=0.6903;MQ=54.87;MQ0=1;MQRankSum=-8.378;QD=29.57;ReadPosRankSum=3.875;VQSLOD=2.7004;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:2.72:0,3,53	1/1:2,6:8:15.05:389,15,0	0/0:26,0:14:21.05:0,21,604	0/0:26,0:19:36.12:0,36,1362	0/0:12,0:21:3.01:0,3,103	0/0:27,0:27:6.02:0,6,229	0/0:30,0:29:11.68:0,12,412	0/0:33,0:32:57.18:0,57,1995	1/1:6,15:22:24.68:1048,25,0	0/0:15,0:16:36.12:0,36,1425	0/0:24,0:28:69.24:0,69,2725	0/0:9,0:23:6.02:0,6,229	0/0:17,0:29:18.53:0,19,556	0/0:19,0:37:8.73:0,9,306	0/0:18,0:18:6.02:0,6,214	0/0:26,0:26:15.05:0,15,330	1/1:17,11:29:21.07:523,21,0	1/1:7,4:11:12.04:312,12,0	1/1:10,4:14:14.62:255,15,0	1/1:6,19:26:45.15:1128,45,0	0/1:11,4:16:59.93:71,0,60	0/0:10,0:21:3.01:0,3,103	0/0:13,0:14:8.62:0,9,295	0/0:26,0:25:8.86:0,9,242	0/0:7,0:26:5.93:0,6,203	0/0:22,0:26:63.22:0,63,2293	0/0:30,0:34:81.28:0,81,3128	0/0:9,0:12:30.10:0,30,1008
chr10	22345021	.	A	ACACACACACACG	7139.54	PASS	AB=0.930;AC=21;AF=0.375;AN=56;BaseQRankSum=3.900;DP=651;FS=5.424;HRun=0;HaplotypeScore=260.2797;InbreedingCoeff=0.5718;MQ=54.69;MQ0=1;MQRankSum=-5.308;QD=22.04;ReadPosRankSum=-0.067;VQSLOD=3.4321;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:28:15.89:332,16,0	0/0:8,0:8:15.05:0,15,394	0/0:26,0:14:23.99:0,24,312	0/0:27,0:19:42.13:0,42,884	0/1:22,0:21:16.53:152,0,17	0/1:13,14:28:15.90:328,0,16	1/1:30,0:29:53.32:1440,53,0	0/0:33,0:32:65.88:0,66,1320	0/0:21,0:21:45.14:0,45,1169	0/0:17,0:17:36.08:0,36,934	0/0:27,0:27:72.15:0,72,1843	0/1:22,0:22:12.89:442,0,13	0/1:27,0:27:12.85:936,0,13	1/1:37,0:37:30.10:1276,30,0	1/1:19,0:19:8.98:119,9,0	1/1:26,0:26:23.91:984,24,0	0/0:29,0:29:32.72:0,33,769	0/0:11,0:11:17.96:0,18,369	0/0:14,0:14:24.04:0,24,386	0/0:26,0:26:48.06:0,48,1190	0/0:16,0:16:5.64:0,6,181	1/1:20,0:20:6.02:316,6,0	0/1:15,0:15:13.45:178,0,13	1/1:26,0:25:23.48:320,23,0	1/1:24,0:23:6.49:317,6,0	0/0:27,0:27:66.18:0,66,1776	0/0:33,0:33:84.19:0,84,2549	0/0:12,0:12:30.03:0,30,805
chr10	22346821	.	G	GT	9310.31	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=3.020;DP=727;FS=20.767;HRun=7;HaplotypeScore=124.8691;InbreedingCoeff=0.9974;MQ=80.27;MQ0=0;MQRankSum=-2.891;QD=21.80;ReadPosRankSum=2.185;VQSLOD=3.4061;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:71.72:0,72,617	0/0:6,0:6:18.01:0,18,168	0/0:36,0:31:61.12:0,61,534	0/0:23,0:22:38.83:0,39,337	1/1:29,0:29:83.77:714,84,0	1/1:35,0:35:82.57:716,83,0	1/1:20,0:20:50.84:413,51,0	1/1:31,1:33:74.86:697,75,0	0/0:21,0:21:54.06:0,54,514	1/1:29,0:29:80.91:738,81,0	1/1:19,0:19:50.78:418,51,0	1/1:28,1:29:77.16:631,77,0	1/1:36,0:36:97.83:777,98,0	1/1:42,0:42:99:877,114,0	0/0:49,0:49:99:0,127,1197	0/0:23,0:23:61.66:0,62,518	0/0:23,0:23:63.04:0,63,588	0/0:12,0:12:27.04:0,27,260	0/0:26,0:26:57.08:0,57,547	0/0:30,0:30:81.11:0,81,776	0/0:20,0:20:50.90:0,51,472	1/1:17,0:17:44.24:376,44,0	1/1:14,1:15:41.60:304,42,0	1/1:25,0:25:65.69:528,66,0	1/1:26,1:27:71.07:587,71,0	1/1:25,0:25:65.89:561,66,0	1/1:39,1:40:99:861,110,0	1/1:6,0:6:17.42:112,17,0
chr10	22346840	.	T	TC	1853.89	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-3.584;DP=703;FS=19.776;HRun=2;HaplotypeScore=144.7609;InbreedingCoeff=0.9940;MQ=78.07;MQ0=0;MQRankSum=-2.668;QD=18.36;ReadPosRankSum=2.550;VQSLOD=2.3898;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,28:29:69.20:910,69,0	0/0:7,0:7:21.07:0,21,258	0/0:35,0:30:43.02:0,43,617	0/0:23,0:21:21.74:0,22,331	0/0:34,0:34:99:0,102,881	0/0:26,0:26:77.83:0,78,716	0/0:23,0:23:62.89:0,63,549	0/0:27,0:28:71.83:0,72,623	0/0:18,0:18:51.14:0,51,603	0/0:34,0:34:98.55:0,99,803	0/0:19,0:19:47.97:0,48,446	0/0:30,0:30:89.69:0,90,771	0/0:33,0:33:96.02:0,96,904	0/0:43,0:43:99:0,126,1175	1/1:45,1:46:99:721,121,0	1/1:26,0:26:29.62:366,30,0	0/0:22,0:22:63.05:0,63,719	0/0:13,0:13:30.07:0,30,354	0/0:18,0:18:54.16:0,54,654	0/0:34,0:34:93.19:0,93,1071	0/0:19,0:19:51.11:0,51,579	0/0:12,0:12:33.04:0,33,325	0/0:22,0:22:59.63:0,60,521	0/0:18,0:18:51.08:0,51,500	0/0:24,0:24:71.84:0,72,637	0/0:22,0:22:65.97:0,66,603	0/0:39,0:38:99:0,111,1060	0/0:6,0:6:18.04:0,18,190
chr10	22349206	.	CAT	C	2484.17	PASS	AB=0.910;AC=23;AF=0.411;AN=56;BaseQRankSum=2.623;DP=561;FS=1.635;HRun=0;HaplotypeScore=165.9202;InbreedingCoeff=0.1502;MQ=48.62;MQ0=33;MQRankSum=0.122;QD=8.60;ReadPosRankSum=-0.280;VQSLOD=3.2683;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:24.08:0,24,169	1/1:5,2:7:2.36:90,2,0	0/0:34,0:12:30.03:0,30,495	0/0:48,0:11:22.56:0,23,345	0/0:23,0:22:60.57:0,61,741	0/0:27,0:26:47.75:0,48,478	0/0:20,0:19:14.10:0,14,261	0/0:30,1:30:36.32:0,36,782	1/1:1,19:20:24.08:346,24,0	0/1:8,1:9:21.30:21,0,151	0/1:14,3:17:98.51:99,0,272	0/1:15,1:16:99:132,0,162	0/1:23,0:23:53.79:54,0,371	0/0:18,1:20:21.97:0,22,292	0/1:25,0:23:8.17:8,0,365	0/1:20,0:20:1.34:1,0,251	1/1:1,17:18:24.93:324,25,0	1/1:3,1:5:5.82:101,6,0	0/1:7,13:19:99:451,0,240	1/1:10,6:16:41.80:549,42,0	1/1:2,11:13:11.07:265,11,0	0/1:16,2:18:92.91:93,0,263	0/1:22,1:20:92.23:92,0,266	0/1:11,1:12:29.30:29,0,80	0/1:25,0:22:12.33:12,0,272	0/0:12,0:10:7.91:0,8,232	0/0:24,1:25:8.21:0,8,329	0/0:17,0:16:34.19:0,34,419
chr10	22349212	.	CAT	C	10691.89	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=0.014;DP=616;FS=8.560;HRun=0;HaplotypeScore=154.1787;InbreedingCoeff=0.7817;MQ=46.30;MQ0=40;MQRankSum=4.504;QD=20.68;ReadPosRankSum=2.137;VQSLOD=4.7394;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:16,2:17:20.21:267,20,0	1/1:8,1:9:8.61:182,9,0	0/0:38,0:9:23.09:0,23,315	0/0:61,0:9:18.27:0,18,183	1/1:2,24:25:26.13:422,26,0	1/1:26,3:28:54.10:721,54,0	1/1:17,4:20:32.44:472,32,0	1/1:31,5:33:53.79:769,54,0	1/1:20,3:23:24.06:324,24,0	1/1:16,1:17:26.82:443,27,0	1/1:9,7:16:28.99:374,29,0	1/1:13,3:17:40.96:524,41,0	1/1:19,3:20:50.27:646,50,0	1/1:23,0:24:32.13:450,32,0	1/1:16,5:20:22.95:363,23,0	1/1:20,1:20:37.19:514,37,0	1/1:16,2:20:1.39:288,1,0	1/1:7,0:8:6.13:96,6,0	1/1:20,1:20:9.07:424,9,0	1/1:18,1:19:46.99:618,47,0	1/1:13,2:15:19.73:297,20,0	1/1:14,5:18:35.66:480,36,0	1/1:22,2:21:38.35:487,38,0	1/1:10,2:11:11.93:160,12,0	1/1:21,3:21:26.99:370,27,0	1/1:10,3:11:24.61:253,25,0	1/1:19,5:27:41.55:466,42,0	1/1:8,6:13:18.35:280,18,0
chr10	22349240	.	C	CTCTCTCTCTC	10072.88	PASS	AB=1.000;AC=46;AF=0.821;AN=56;BaseQRankSum=-5.141;DP=691;FS=33.916;HRun=0;HaplotypeScore=220.7422;InbreedingCoeff=0.2269;MQ=48.10;MQ0=43;MQRankSum=-2.907;QD=17.89;ReadPosRankSum=2.366;VQSLOD=2.7537;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:21,0:19:44.50:138,0,44	0/1:10,0:10:2.75:109,0,3	0/0:47,0:13:14.14:0,14,177	0/0:81,0:18:6.57:0,7,75	0/1:27,0:26:44.66:45,0,232	1/1:34,0:33:27.08:564,27,0	1/1:25,0:24:22.15:363,22,0	1/1:39,0:37:46.68:698,47,0	0/1:21,0:21:69.46:177,0,69	1/1:19,0:16:21:384,21,0	1/1:24,0:21:19.56:351,20,0	1/1:19,0:19:30.10:964,30,0	1/1:17,0:15:21.07:638,21,0	1/1:12,11:25:11.99:314,12,0	1/1:25,0:23:21.02:432,21,0	1/1:17,0:16:15.04:372,15,0	0/1:20,0:20:2.21:216,0,2	1/1:13,0:13:7.47:95,7,0	1/1:24,0:23:14.86:605,15,0	1/1:21,0:21:6:434,6,0	0/1:17,0:17:23.30:92,0,23	1/1:24,0:23:18.06:518,18,0	1/1:26,0:23:29.31:617,29,0	1/1:15,0:14:6.02:218,6,0	1/1:21,0:18:15.05:320,15,0	1/1:17,0:12:25.80:338,26,0	1/1:30,0:28:46.70:800,47,0	1/1:12,0:11:21.06:270,21,0
chr10	22349253	.	CTT	C	3468.15	PASS	AB=0.895;AC=13;AF=0.232;AN=56;BaseQRankSum=6.113;DP=660;FS=14.193;HRun=3;HaplotypeScore=157.9852;InbreedingCoeff=0.9225;MQ=55.59;MQ0=26;MQRankSum=-3.164;QD=24.25;ReadPosRankSum=-0.662;VQSLOD=1.0889;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:41.30:0,41,717	0/0:10,0:10:30.01:0,30,503	0/0:34,0:14:20.62:0,21,379	0/0:72,1:23:31.06:0,31,451	0/0:28,0:28:63.60:0,64,1253	0/0:35,0:34:61.89:0,62,1539	0/0:19,0:20:42.22:0,42,931	1/1:2,30:32:77.94:956,78,0	0/0:21,0:21:50.21:0,50,718	1/1:3,19:18:45.15:682,45,0	1/1:4,20:21:26.56:354,27,0	0/0:22,0:24:40.52:0,41,1048	0/1:15,0:16:0.37:0,0,528	0/0:25,0:25:9.39:0,9,585	0/0:26,0:26:57.45:0,57,1107	0/0:21,0:21:20.55:0,21,758	0/0:25,0:25:59.17:0,59,991	0/0:10,0:10:21:0,21,331	0/0:22,0:21:52.90:0,53,835	0/0:23,0:23:56.25:0,56,1047	0/0:15,0:15:30.02:0,30,439	0/0:20,0:22:33.48:0,33,783	0/0:23,0:23:23.96:0,24,674	0/0:12,0:13:11.18:0,11,307	0/0:20,0:20:45.79:0,46,779	1/1:2,16:13:38.95:541,39,0	1/1:4,20:23:56.45:709,56,0	1/1:0,5:5:15.05:227,15,0
chr10	22349520	.	CT	C	1864.04	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=3.741;DP=645;FS=2.509;HRun=2;HaplotypeScore=79.3828;InbreedingCoeff=0.9862;MQ=88.42;MQ0=0;MQRankSum=-1.082;QD=33.89;ReadPosRankSum=3.374;VQSLOD=4.0276;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:36.12:0,36,538	0/0:9,0:9:27.09:0,27,391	0/0:26,0:26:78.11:0,78,1099	0/0:22,0:22:66.19:0,66,908	0/0:29,0:29:87.29:0,87,1303	0/0:39,0:39:99:0,114,1668	0/0:15,0:15:45.14:0,45,656	0/0:49,0:49:99:0,147,2064	0/0:20,0:20:60.19:0,60,849	0/0:35,0:35:99:0,105,1573	0/0:21,0:21:63.13:0,63,893	0/0:26,0:26:75.25:0,75,1123	0/0:31,0:31:93.28:0,93,1351	0/0:23,0:23:69.23:0,69,1014	1/1:0,30:30:87.28:1129,87,0	1/1:2,23:25:66.21:857,66,0	0/0:16,0:16:45.11:0,45,613	0/0:5,0:5:15.05:0,15,217	0/0:22,0:22:63.64:0,64,838	0/0:26,0:26:75.20:0,75,1036	0/0:7,0:7:18.06:0,18,260	0/0:26,0:26:72.24:0,72,1072	0/0:27,0:27:78.24:0,78,1127	0/0:20,0:20:60.19:0,60,878	0/0:16,0:16:48.16:0,48,719	0/0:32,0:32:96.32:0,96,1420	0/0:28,0:27:84.28:0,84,1252	0/0:8,0:8:24.05:0,24,336
chr10	22351379	.	GA	G	2823.56	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=11.610;DP=528;FS=6.650;HRun=7;HaplotypeScore=49.9537;InbreedingCoeff=0.9876;MQ=76.25;MQ0=0;MQRankSum=0.057;QD=24.55;ReadPosRankSum=1.474;VQSLOD=4.0535;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:75.20:0,75,922	1/1:0,3:3:9.02:92,9,0	0/0:12,0:12:32.92:0,33,367	0/0:12,0:12:30.02:0,30,346	0/0:18,0:18:48.14:0,48,590	0/0:26,0:26:72.22:0,72,891	0/0:14,0:14:36.10:0,36,440	0/0:29,0:29:84.27:0,84,1057	1/1:1,14:15:36.08:365,36,0	0/0:19,0:19:54.17:0,54,679	0/0:23,0:23:66.21:0,66,830	0/0:20,0:20:57.18:0,57,717	0/0:22,0:22:57.18:0,57,716	0/0:16,0:16:42.13:0,42,528	0/0:23,0:23:63.20:0,63,793	0/0:16,0:16:48.15:0,48,604	1/1:3,21:24:51.11:520,51,0	1/1:0,15:15:45.10:459,45,0	1/1:0,17:17:51.09:512,51,0	1/1:2,31:33:87.19:888,87,0	1/1:0,8:8:18.04:184,18,0	0/0:18,0:18:54.17:0,54,679	0/0:28,0:28:84.27:0,84,1050	0/0:11,0:11:33.11:0,33,415	0/0:18,0:18:54.16:0,54,667	0/0:22,0:22:63.20:0,63,792	0/0:26,0:26:72.23:0,72,904	0/0:14,0:13:36.12:0,36,453
chr10	22352922	.	T	TA	3766.68	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-1.928;DP=407;FS=3.226;HRun=8;HaplotypeScore=50.4898;InbreedingCoeff=0.9843;MQ=68.58;MQ0=0;MQRankSum=-0.344;QD=24.15;ReadPosRankSum=1.205;VQSLOD=4.4405;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:36.02:0,36,329	0/0:7,0:7:21.01:0,21,192	0/0:15,0:11:23.96:0,24,204	0/0:12,0:10:20.43:0,20,146	0/0:27,0:27:63.01:0,63,570	1/1:2,19:21:51.15:587,51,0	1/1:2,10:12:27.08:312,27,0	0/0:17,0:16:32.99:0,33,302	0/0:16,0:16:47.92:0,48,412	0/0:11,0:11:18:0,18,165	0/0:14,0:14:35.81:0,36,314	1/1:5,9:14:21.02:227,21,0	1/1:2,15:17:36.10:411,36,0	1/1:3,11:14:27.08:308,27,0	1/1:4,7:11:20.81:206,21,0	1/1:1,14:15:42.12:486,42,0	0/0:23,0:23:66.01:0,66,595	0/0:8,0:8:23.97:0,24,211	0/0:15,0:15:39.01:0,39,353	0/0:20,0:20:41.97:0,42,376	0/0:13,0:13:38.98:0,39,348	1/1:0,11:11:27.08:312,27,0	1/1:3,11:14:24.03:262,24,0	1/1:2,5:7:15.04:171,15,0	1/1:2,18:20:42.12:485,42,0	0/0:13,0:13:36.01:0,36,326	0/0:17,0:17:42.02:0,42,384	0/0:5,0:4:9:0,9,82
chr10	22352979	.	C	CTCCTCT	9711.64	PASS	AB=1.000;AC=25;AF=0.463;AN=54;BaseQRankSum=2.069;DP=469;FS=2.443;HRun=0;HaplotypeScore=113.0550;InbreedingCoeff=0.8827;MQ=55.93;MQ0=40;MQRankSum=-5.877;QD=42.59;ReadPosRankSum=0.606;VQSLOD=4.5472;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:23:10.50:0,10,240	0/0:3,0:3:9:0,9,119	1/1:15,0:10:3.85:11,4,0	0/1:8,0:8:0.57:1,0,57	0/0:31,0:30:50.13:0,50,504	1/1:22,6:27:68.79:1368,69,0	1/1:9,1:10:20.97:366,21,0	0/0:18,0:12:15.95:0,16,138	0/0:17,0:15:39.77:0,40,538	0/0:7,0:4:3:0,3,29	0/0:11,0:10:10.72:0,11,100	1/1:13,6:19:42.48:906,42,0	1/1:13,8:18:45.11:1204,45,0	1/1:10,4:13:35.90:685,36,0	1/1:14,4:17:46.89:1045,47,0	1/1:16,5:19:53.80:989,54,0	0/0:30,0:27:65.57:0,66,1050	0/0:10,0:8:20.71:0,21,337	0/0:19,0:14:33.06:0,33,505	0/0:22,0:20:47.20:0,47,750	0/0:27,0:25:65.77:0,66,1028	1/1:12,7:17:44.98:959,45,0	1/1:10,7:16:32.98:660,33,0	1/1:17,0:13:26.33:464,26,0	1/1:14,7:21:59.74:1054,60,0	0/0:15,0:12:29.85:0,30,281	0/0:4,0:3:8.93:0,9,66	./.
chr10	22353771	.	AG	A	867.95	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.585;DP=673;FS=10.163;HRun=1;HaplotypeScore=63.7705;InbreedingCoeff=0.9878;MQ=90.47;MQ0=0;MQRankSum=-1.625;QD=36.16;ReadPosRankSum=-1.576;VQSLOD=2.6054;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,105,1678	0/0:6,0:6:18.06:0,18,288	0/0:19,0:19:51.15:0,51,767	0/0:33,0:33:76.66:0,77,1146	1/1:0,24:24:72.15:963,72,0	0/0:29,0:29:87.27:0,87,1341	0/0:20,0:20:60.20:0,60,954	0/0:29,0:29:87.26:0,87,1304	0/0:35,0:35:99:0,105,1652	0/0:34,0:34:99:0,102,1589	0/0:11,0:11:33.11:0,33,527	0/0:22,0:22:66.21:0,66,1028	0/0:27,0:27:81.28:0,81,1292	0/0:19,0:19:57.16:0,57,855	0/0:34,0:34:99:0,102,1600	0/0:30,0:29:90.31:0,90,1436	0/0:30,0:30:87.30:0,87,1388	0/0:18,0:18:54.18:0,54,849	0/0:20,0:20:60.18:0,60,912	0/0:25,0:25:75.26:0,75,1195	0/0:42,0:42:99:0,123,1939	0/0:13,0:13:39.13:0,39,621	0/0:20,0:20:54.17:0,54,832	0/0:27,0:27:78.27:0,78,1239	0/0:26,0:26:78.24:0,78,1191	0/0:19,0:19:57.19:0,57,912	0/0:17,0:17:48.16:0,48,760	0/0:7,0:7:21.07:0,21,335
chr10	22354034	.	CA	C	2850.30	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-12.549;DP=660;FS=1.719;HRun=9;HaplotypeScore=98.8275;InbreedingCoeff=0.9928;MQ=76.89;MQ0=0;MQRankSum=-1.658;QD=22.62;ReadPosRankSum=0.959;VQSLOD=3.8904;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:78.21:0,78,888	1/1:2,9:11:27.01:247,27,0	0/0:15,0:14:29.78:0,30,306	0/0:15,0:15:30.05:0,30,318	0/0:28,0:28:78.23:0,78,900	0/0:21,0:21:56.25:0,56,367	0/0:19,0:19:50.23:0,50,320	0/0:39,0:39:99:0,99,567	1/1:2,24:26:69.04:631,69,0	0/0:25,0:25:69.66:0,70,390	0/0:28,0:28:77.12:0,77,519	0/0:17,0:17:41.53:0,42,282	0/0:33,0:33:77.07:0,77,514	0/0:26,0:26:74.11:0,74,493	0/0:37,0:37:99:0,107,712	0/0:36,0:36:99:0,104,684	1/1:0,23:23:66.04:604,66,0	1/1:1,6:7:12:110,12,0	1/1:1,16:17:48.03:439,48,0	1/1:2,30:32:90.04:824,90,0	1/1:1,9:10:21.01:192,21,0	0/0:26,0:26:74.07:0,74,488	0/0:25,0:25:74.25:0,74,516	0/0:24,0:24:68.18:0,68,461	0/0:29,0:29:85.59:0,86,540	0/0:29,0:29:84.85:0,85,500	0/0:26,0:26:68.20:0,68,457	0/0:8,0:8:23.82:0,24,171
chr10	22354396	.	TA	T	5627.64	PASS	AB=0.857;AC=39;AF=0.696;AN=56;BaseQRankSum=-12.728;DP=561;FS=30.424;HRun=12;HaplotypeScore=75.2998;InbreedingCoeff=0.8135;MQ=69.73;MQ0=1;MQRankSum=-1.172;QD=13.27;ReadPosRankSum=0.546;VQSLOD=2.7381;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,34:39:74.49:571,74,0	0/0:13,0:13:26.78:0,27,110	0/0:10,0:9:4.54:0,5,49	0/1:15,2:12:47.54:48,0,65	1/1:11,14:27:51.78:377,52,0	1/1:4,12:17:31.90:238,32,0	1/1:2,12:14:26.89:209,27,0	1/1:13,28:41:77.55:593,78,0	0/0:14,0:14:32.14:0,32,133	1/1:6,15:23:48.82:352,49,0	1/1:7,19:26:8.79:345,9,0	1/1:3,11:14:26.88:209,27,0	1/1:2,16:19:37.90:284,38,0	1/1:5,19:24:44.81:348,45,0	1/1:3,15:18:38.69:289,39,0	1/1:7,13:20:29.54:273,30,0	0/0:29,0:29:64.28:0,64,265	0/0:14,0:14:24.11:0,24,100	0/0:20,0:20:45.60:0,46,189	0/0:27,0:27:60.57:0,61,280	0/0:9,0:10:21.55:0,22,90	1/1:4,10:14:20.83:162,21,0	1/1:2,18:20:38.78:295,39,0	1/1:2,9:11:23.90:186,24,0	1/1:8,19:28:1.35:184,1,0	1/1:5,17:23:25.36:370,25,0	1/1:5,13:18:2.43:201,2,0	1/1:4,6:10:11.92:93,12,0
chr10	22354399	.	A	AG	4061.16	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-14.525;DP=562;FS=11.641;HRun=0;HaplotypeScore=82.7148;InbreedingCoeff=0.9849;MQ=70.77;MQ0=1;MQRankSum=-1.979;QD=33.02;ReadPosRankSum=3.040;VQSLOD=2.4155;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:95.62:0,96,741	1/1:0,12:12:30.10:398,30,0	0/0:11,0:10:20.99:0,21,167	0/0:17,0:11:29.65:0,30,250	0/0:25,0:25:74.72:0,75,581	0/0:17,0:17:41.86:0,42,326	0/0:14,0:14:32.89:0,33,256	0/0:39,0:39:99:0,111,908	1/1:0,14:14:36.12:475,36,0	0/0:20,0:20:59.81:0,60,474	0/0:27,0:27:71.83:0,72,594	0/0:15,0:15:35.90:0,36,284	0/0:19,0:19:41.53:0,42,312	0/0:22,0:22:53.83:0,54,418	0/0:19,0:19:47.88:0,48,381	0/0:17,1:18:8:0,8,305	1/1:1,27:28:72.22:955,72,0	1/1:0,14:14:27.09:358,27,0	1/1:0,20:20:57.15:724,57,0	1/1:0,24:25:74.80:838,75,0	1/1:1,9:10:24.08:313,24,0	0/0:13,0:13:38.82:0,39,299	0/0:23,0:23:44.42:0,44,350	0/0:10,0:10:26.91:0,27,207	0/0:31,0:31:59.80:0,60,490	0/0:25,0:25:71.78:0,72,578	0/0:22,0:22:50.81:0,51,416	0/0:10,0:10:23.95:0,24,195
chr10	22354810	.	G	GT	2488.22	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-4.799;DP=712;FS=4.746;HRun=8;HaplotypeScore=70.5492;InbreedingCoeff=0.9952;MQ=66.48;MQ0=1;MQRankSum=0.372;QD=27.65;ReadPosRankSum=0.897;VQSLOD=4.2468;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,29:31:90.23:1024,90,0	0/0:6,0:6:17.98:0,18,157	0/0:25,0:23:39.29:0,39,409	0/0:18,0:17:44.82:0,45,388	0/0:44,0:44:99:0,123,1126	0/0:37,0:37:99:0,105,955	0/0:26,0:26:72.04:0,72,658	0/0:30,0:30:51.02:0,51,467	0/0:26,0:26:72.02:0,72,654	0/0:24,0:24:57.02:0,57,522	0/0:27,0:27:72.04:0,72,659	0/0:20,0:20:57.01:0,57,515	0/0:26,0:26:66.03:0,66,604	0/0:20,0:20:51.02:0,51,467	1/1:4,24:28:69.21:796,69,0	1/1:5,25:31:72.05:811,72,0	0/0:35,0:35:96.05:0,96,878	0/0:10,0:10:21:0,21,192	0/0:27,0:27:66.03:0,66,604	0/0:27,0:27:45.80:0,46,605	0/0:28,0:28:72.03:0,72,658	0/0:17,0:17:51.03:0,51,466	0/0:26,0:27:71.07:0,71,637	0/0:9,0:9:27.01:0,27,247	0/0:27,0:27:69:0,69,625	0/0:40,0:40:99:0,114,1040	0/0:30,0:30:84.04:0,84,768	0/0:16,0:16:48.03:0,48,439
chr10	22355934	.	T	TA	2400.23	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=-12.570;DP=502;FS=0.909;HRun=10;HaplotypeScore=75.8293;InbreedingCoeff=0.8476;MQ=75.21;MQ0=0;MQRankSum=-1.582;QD=18.05;ReadPosRankSum=-2.172;VQSLOD=3.4776;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:56.91:0,57,468	0/0:10,0:10:25:0,25,115	0/0:12,0:12:5.32:0,5,131	0/0:14,0:13:11.22:0,11,141	0/0:36,0:36:98.87:0,99,812	0/0:27,0:27:68.90:0,69,566	0/0:16,0:17:15.20:0,15,316	1/1:2,15:17:45.10:472,45,0	0/0:15,0:15:12.48:0,12,133	1/1:5,15:20:20.45:415,20,0	1/1:4,17:21:51.09:531,51,0	0/0:16,0:16:38.94:0,39,320	0/0:22,0:22:53.84:0,54,433	0/0:8,0:8:23.97:0,24,197	0/0:18,0:18:47.94:0,48,394	0/0:24,0:24:59.92:0,60,492	0/0:22,0:22:54.08:0,54,271	0/0:11,0:11:23.88:0,24,115	0/1:19,0:19:10.87:11,0,110	0/0:27,0:27:45.58:0,46,279	0/0:4,0:4:8.29:0,8,36	0/0:12,0:12:29.93:0,30,243	0/0:19,0:19:50.86:0,51,411	0/0:13,0:13:32.94:0,33,268	0/0:17,0:17:38.92:0,39,316	1/1:3,14:17:14.44:351,14,0	1/1:5,25:30:44.53:679,45,0	1/1:4,5:9:12.03:128,12,0
chr10	22356835	.	AATGAAGGTTGAG	A	5102.83	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=10.544;DP=664;FS=0.576;HRun=0;HaplotypeScore=223.0431;InbreedingCoeff=0.9993;MQ=77.79;MQ0=0;MQRankSum=-10.626;QD=108.57;ReadPosRankSum=1.460;VQSLOD=4.3980;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:72.20:0,72,4267	0/0:9,0:9:27.08:0,27,1553	0/0:14,0:14:42.14:0,42,2403	0/0:18,0:18:54.18:0,54,2397	0/0:34,0:34:99:0,102,6077	0/0:29,0:29:87.30:0,87,5475	0/0:17,0:17:51.18:0,51,3080	0/0:35,0:35:99:0,105,6051	0/0:23,0:23:69.24:0,69,4211	0/0:33,0:33:99:0,99,5858	0/0:20,0:20:60.21:0,60,3440	0/0:20,0:20:60.21:0,60,3660	0/0:23,0:23:69.24:0,69,4088	0/0:26,0:26:78.27:0,78,4551	1/1:0,26:26:75.26:2967,75,0	1/1:1,20:21:54.18:2136,54,0	0/0:23,0:23:69.24:0,69,4075	0/0:11,0:11:33.11:0,33,1955	0/0:13,0:13:39.13:0,39,2212	0/0:34,0:34:99:0,102,5978	0/0:21,0:21:63.22:0,63,3939	0/0:31,0:31:93.32:0,93,5118	0/0:43,0:43:99:0,129,7667	0/0:26,0:26:78.27:0,78,4712	0/0:24,0:24:72.25:0,72,4484	0/0:21,0:21:63.21:0,63,3429	0/0:28,0:28:84.29:0,84,5037	0/0:16,0:16:45.15:0,45,2655
chr10	22364638	.	AC	A	11670.78	PASS	AB=0.520;AC=25;AF=0.446;AN=56;BaseQRankSum=14.795;DP=779;FS=2.188;HRun=3;HaplotypeScore=80.8622;InbreedingCoeff=0.9302;MQ=91.35;MQ0=0;MQRankSum=-3.215;QD=33.93;ReadPosRankSum=0.945;VQSLOD=5.3540;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,120,1661	0/1:1,12:13:12.77:304,0,13	0/0:38,0:38:95.43:0,95,1275	0/0:28,0:28:81.24:0,81,1102	0/0:38,0:38:99:0,108,1494	0/0:26,0:26:78.25:0,78,1103	0/0:27,0:27:75.23:0,75,1041	1/1:3,35:38:99:1211,102,0	1/1:1,25:26:72.22:891,72,0	1/1:0,30:30:90.22:1059,90,0	1/1:2,32:34:93.24:1132,93,0	0/0:34,0:34:99:0,99,1401	0/0:27,0:27:81.26:0,81,1146	0/0:27,0:27:81.27:0,81,1164	0/0:36,0:36:99:0,102,1444	0/0:25,0:25:72.18:0,72,993	1/1:0,30:30:87.27:1077,87,0	1/1:0,8:8:18.06:223,18,0	1/1:0,34:34:99:1198,99,0	1/1:2,24:26:75.10:871,75,0	1/1:0,17:17:51.16:632,51,0	0/0:26,0:26:78.22:0,78,1064	0/0:21,0:21:63.16:0,63,858	0/0:18,0:18:51.14:0,51,694	0/0:24,0:24:72.22:0,72,1002	1/1:1,39:40:99:1438,117,0	1/1:0,36:36:99:1226,99,0	1/1:0,12:12:33.10:408,33,0
chr10	22366069	.	AT	A	6894.31	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=15.903;DP=587;FS=4.931;HRun=9;HaplotypeScore=55.4839;InbreedingCoeff=0.9850;MQ=72.13;MQ0=0;MQRankSum=0.538;QD=22.10;ReadPosRankSum=1.773;VQSLOD=5.7598;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:75.21:0,75,856	1/1:1,11:12:27.01:247,27,0	0/0:10,0:10:9.50:0,9,104	0/0:11,0:11:21:0,21,208	0/0:30,0:30:90.26:0,90,1030	1/1:6,26:32:78.04:714,78,0	1/1:2,8:10:24.01:220,24,0	0/0:42,0:42:99:0,102,1153	1/1:0,18:18:42.02:384,42,0	0/0:24,0:24:63.18:0,63,719	0/0:22,0:23:63:0,63,690	1/1:4,23:27:66.03:604,66,0	1/1:3,19:22:51.03:466,51,0	1/1:0,20:20:51.03:467,51,0	0/0:27,0:27:81.23:0,81,926	0/0:18,0:18:51.15:0,51,589	1/1:1,18:19:45.02:412,45,0	1/1:0,6:6:15.01:137,15,0	1/1:2,13:15:35.97:319,36,0	1/1:1,23:24:62.86:563,63,0	1/1:1,4:5:12:110,12,0	1/1:2,25:27:72.04:659,72,0	1/1:2,18:20:44.90:412,45,0	1/1:1,18:19:51.03:467,51,0	1/1:4,32:36:78.03:714,78,0	0/0:17,0:18:48.14:0,48,546	0/0:29,0:29:69.19:0,69,785	0/0:17,0:17:45.12:0,45,509
chr10	22368929	.	C	CTT	8603.37	PASS	AB=0.529;AC=37;AF=0.661;AN=56;BaseQRankSum=-2.695;DP=593;FS=10.921;HRun=9;HaplotypeScore=73.9684;InbreedingCoeff=0.9370;MQ=78.52;MQ0=0;MQRankSum=-1.719;QD=23.38;ReadPosRankSum=1.439;VQSLOD=3.1648;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,31:35:49.34:1168,49,0	1/1:2,0:14:29.94:103,30,0	0/0:24,0:23:47.94:0,48,471	0/0:15,0:14:27.01:0,27,279	0/0:29,0:29:75.13:0,75,787	1/1:3,14:18:33.11:508,33,0	0/1:1,8:9:4.84:342,0,5	0/0:31,0:31:63.09:0,63,662	1/1:2,0:13:21.99:78,22,0	0/0:21,0:21:57.13:0,57,601	0/0:21,0:21:51.10:0,51,534	1/1:4,23:27:60.20:918,60,0	1/1:4,19:24:53.67:794,54,0	1/1:4,20:28:50.14:708,50,0	1/1:2,12:15:36.12:538,36,0	1/1:2,22:26:59.69:886,60,0	1/1:0,0:18:29.94:103,30,0	1/1:0,0:11:24.01:81,24,0	1/1:5,1:31:61.45:263,61,0	1/1:2,0:16:32.62:113,33,0	1/1:3,0:21:39.65:135,40,0	1/1:0,11:12:35.61:508,36,0	1/1:2,22:25:44.98:675,45,0	1/1:2,7:9:18.06:267,18,0	1/1:0,15:16:27.09:416,27,0	0/0:34,0:34:84.17:0,84,888	0/0:29,0:29:78.17:0,78,829	0/0:21,0:21:63.13:0,63,660
chr10	22369232	.	G	GGAA	3839.87	PASS	AB=0.566;AC=22;AF=0.393;AN=56;BaseQRankSum=13.979;DP=673;FS=13.307;HRun=0;HaplotypeScore=134.5433;InbreedingCoeff=-0.0731;MQ=82.24;MQ0=0;MQRankSum=-2.970;QD=8.71;ReadPosRankSum=5.131;VQSLOD=2.0676;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:3,0:40:51.68:172,0,52	0/0:17,0:17:48.14:0,48,850	0/0:20,0:22:17.57:0,18,581	0/0:23,0:21:49.31:0,49,509	0/0:4,0:36:90.27:0,90,561	0/1:8,0:25:84.81:283,0,85	0/1:3,1:24:6.09:304,0,6	0/1:7,0:33:96.39:197,0,96	0/0:19,0:19:33.44:0,33,797	0/1:4,0:28:26.41:138,0,26	0/1:7,0:29:71.31:96,0,71	0/1:9,0:19:99:204,0,177	1/1:4,0:18:13.99:322,14,0	0/1:4,0:19:26.33:235,0,26	0/1:5,0:29:68.89:69,0,75	0/1:6,0:24:40.85:41,0,110	0/0:26,0:26:72.14:0,72,1142	0/0:19,0:19:48.09:0,48,803	0/0:20,0:19:57.16:0,57,1020	0/0:30,0:33:93.01:0,93,1493	0/0:17,0:17:51.14:0,51,837	0/1:3,0:15:33.70:199,0,34	0/1:7,0:24:69:340,0,69	0/1:4,0:15:33.30:234,0,33	1/1:4,0:25:1.39:481,1,0	0/1:6,0:26:94.91:153,0,95	1/1:0,0:26:26.67:157,27,0	1/1:2,0:22:34.15:215,34,0
chr10	22369820	.	ATG	A	326.86	PASS	AB=0.962;AC=14;AF=0.438;AN=32;BaseQRankSum=-4.003;DP=89;FS=3.211;HRun=0;HaplotypeScore=42.2775;InbreedingCoeff=0.4272;MQ=63.66;MQ0=3;MQRankSum=0.566;QD=7.78;ReadPosRankSum=2.757;VQSLOD=2.7565;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/1:1,0:1:0:0,0,0	./.	0/0:12,0:5:5.52:0,6,41	0/0:5,0:5:5.75:0,6,59	1/1:5,3:8:5.09:131,5,0	1/1:2,0:2:5.92:42,6,0	1/1:10,0:8:14.78:102,15,0	0/0:1,0:1:2.60:0,3,10	./.	./.	0/0:7,0:7:2.60:0,3,10	1/1:3,0:3:6.02:65,6,0	0/0:4,0:4:0:0,0,0	0/0:2,0:2:1.82:0,2,5	./.	0/0:5,0:5:5.69:0,6,30	./.	1/1:4,0:4:4.75:57,5,0	0/0:3,0:3:3.63:0,4,14	./.	./.	1/1:2,0:2:2.99:24,3,0	./.	0/1:11,1:11:3.85:18,0,4	./.	./.	./.
chr10	22369842	.	G	GGTATATATA	772.21	PASS	AB=0.833;AC=11;AF=0.306;AN=36;BaseQRankSum=-0.867;DP=139;FS=0.000;HRun=0;HaplotypeScore=51.5792;InbreedingCoeff=0.5219;MQ=57.92;MQ0=4;MQRankSum=-0.814;QD=18.83;ReadPosRankSum=0.280;VQSLOD=1.8498;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	0/1:0,0:1:0:0,0,0	0/0:8,0:2:0:0,0,0	0/0:13,0:6:7.42:0,7,93	0/0:6,0:6:9.03:0,9,257	0/0:12,0:12:9.03:0,9,208	0/0:3,0:3:5.27:0,5,45	0/0:12,0:9:21.05:0,21,352	1/1:1,0:2:3.01:104,3,0	./.	./.	0/0:7,0:7:5.38:0,5,37	./.	0/0:6,0:6:0:0,0,0	./.	./.	1/1:3,1:8:0.68:100,1,0	1/1:2,0:4:9.03:233,9,0	1/1:3,0:8:23.99:443,24,0	0/0:1,0:5:2.80:0,3,7	./.	./.	0/1:3,0:3:0:0,0,0	./.	0/1:14,0:14:0.06:0,0,0	0/0:3,0:3:9.02:0,9,202	0/0:4,0:4:5.99:0,6,48	./.
chr10	22369846	.	G	GTATA	536.19	PASS	AB=0.767;AC=26;AF=0.542;AN=48;BaseQRankSum=3.640;DP=150;FS=0.000;HRun=0;HaplotypeScore=47.6951;InbreedingCoeff=0.2945;MQ=57.87;MQ0=4;MQRankSum=-1.448;QD=4.54;ReadPosRankSum=0.663;VQSLOD=1.3245;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:4:2.04:6,2,0	0/1:1,0:1:0:0,0,0	0/0:7,0:2:0:0,0,0	0/1:15,0:8:21.08:40,0,21	0/0:6,0:6:12.03:0,12,161	0/1:4,8:12:0:0,0,0	1/1:3,0:3:9.01:141,9,0	1/1:8,0:12:19.48:88,19,0	1/1:2,0:2:3.01:34,3,0	./.	1/1:1,0:1:2.96:19,3,0	1/1:0,6:7:5.95:93,6,0	0/0:0,2:2:0:0,0,0	0/1:0,5:6:0:0,0,0	0/1:1,1:4:0:0,0,0	./.	0/1:9,0:9:15.97:63,0,16	1/1:4,0:4:9:91,9,0	0/1:8,0:8:17.24:51,0,17	1/1:5,0:5:5.28:29,5,0	0/0:1,0:1:2.99:0,3,24	./.	0/1:0,3:3:0:0,0,0	0/1:3,0:3:0:0,0,0	0/1:5,10:15:0.19:0,0,0	0/0:4,0:4:9.02:0,9,117	0/0:4,0:4:5.99:0,6,50	./.
chr10	22371034	.	C	CT	16372.15	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-4.853;DP=482;FS=9.478;HRun=3;HaplotypeScore=59.1943;InbreedingCoeff=0.9924;MQ=78.01;MQ0=0;MQRankSum=-5.105;QD=38.61;ReadPosRankSum=2.125;VQSLOD=4.8879;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,19:20:57.19:798,57,0	1/1:1,6:7:18.06:252,18,0	0/0:11,0:11:26.02:0,26,247	0/0:13,0:13:33.08:0,33,363	0/0:34,0:34:93.27:0,93,1105	1/1:0,18:18:51.17:714,51,0	1/1:1,11:12:33.11:462,33,0	1/1:2,19:21:57.18:782,57,0	1/1:2,17:19:48.16:672,48,0	1/1:2,23:25:72.18:953,72,0	1/1:0,21:21:60.16:818,60,0	1/1:0,11:11:27.09:378,27,0	1/1:0,20:20:57.19:798,57,0	1/1:0,13:13:36.12:504,36,0	1/1:0,12:12:36.12:504,36,0	1/1:0,18:18:51.17:714,51,0	1/1:1,15:16:39.13:546,39,0	1/1:1,19:20:57.19:798,57,0	1/1:3,24:27:78.22:1028,78,0	1/1:1,19:20:57.15:776,57,0	1/1:1,9:10:27.09:378,27,0	1/1:0,8:8:24.08:336,24,0	1/1:3,13:17:39.13:546,39,0	1/1:1,9:10:27.09:378,27,0	1/1:0,9:9:24.08:336,24,0	1/1:0,31:31:93.31:1302,93,0	1/1:0,32:31:93.31:1302,93,0	1/1:0,7:7:21.07:294,21,0
chr10	22372065	.	GAAGTAT	G	7917.71	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=15.884;DP=642;FS=1.216;HRun=0;HaplotypeScore=145.3477;InbreedingCoeff=0.9989;MQ=72.38;MQ0=1;MQRankSum=-12.866;QD=55.76;ReadPosRankSum=-0.845;VQSLOD=4.9686;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:63.22:0,63,2258	0/0:13,0:13:39.13:0,39,1359	0/0:13,0:13:33.74:0,34,779	0/0:10,0:10:21.47:0,21,642	0/0:41,0:41:99:0,120,4178	0/0:29,0:29:87.30:0,87,3065	0/0:13,0:13:39.13:0,39,1265	1/1:4,24:28:72.23:1576,72,0	0/0:26,0:26:75.26:0,75,2669	1/1:2,24:26:69.19:1526,69,0	1/1:1,18:19:30.10:721,30,0	0/0:19,0:19:57.20:0,57,1929	0/0:37,0:37:99:0,111,3662	0/0:21,0:21:63.22:0,63,2262	0/0:35,0:35:99:0,99,3384	0/0:21,0:21:60.21:0,60,2039	0/0:23,0:22:63.22:0,63,2216	0/0:15,0:15:45.15:0,45,1535	0/0:16,0:16:48.16:0,48,1671	0/0:30,0:30:90.31:0,90,3149	0/0:19,0:19:57.20:0,57,1981	0/0:26,0:26:72.25:0,72,2444	0/0:28,0:28:81.28:0,81,2860	0/0:18,0:18:54.19:0,54,1905	0/0:26,0:26:69.24:0,69,2451	1/1:1,26:27:72.25:1730,72,0	1/1:6,27:32:72.25:1715,72,0	1/1:0,9:9:27.09:649,27,0
chr10	22372562	.	AT	A	3572.32	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=11.872;DP=650;FS=1.659;HRun=7;HaplotypeScore=63.4778;InbreedingCoeff=0.9973;MQ=87.15;MQ0=0;MQRankSum=-3.750;QD=26.66;ReadPosRankSum=2.128;VQSLOD=4.4643;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:36.12:0,36,452	1/1:2,7:9:21.04:214,21,0	0/0:27,0:27:69.18:0,69,821	0/0:20,0:20:17.78:0,18,373	0/0:33,0:33:93.24:0,93,1112	0/0:23,0:23:60.19:0,60,754	0/0:18,0:18:54.17:0,54,668	0/0:31,0:31:78.25:0,78,981	1/1:1,19:20:57.13:582,57,0	0/0:28,0:28:69.22:0,69,868	0/0:19,0:19:54.17:0,54,679	0/0:15,0:15:45.13:0,45,542	0/0:25,0:25:71.70:0,72,859	0/0:40,0:40:99:0,114,1401	0/0:30,0:30:87.26:0,87,1071	0/0:23,0:23:69.18:0,69,811	1/1:0,20:20:51.12:520,51,0	1/1:0,11:11:27.06:275,27,0	1/1:1,29:30:87.18:881,87,0	1/1:1,26:27:72.15:733,72,0	1/1:1,16:17:36.08:367,36,0	0/0:33,0:33:81.22:0,81,981	0/0:28,0:28:78.20:0,78,951	0/0:17,0:17:51.15:0,51,626	0/0:21,0:21:60.19:0,60,755	0/0:35,0:35:99:0,105,1321	0/0:28,0:27:75.24:0,75,943	0/0:9,0:9:27.09:0,27,340
chr10	22375426	.	G	GTTCTGGGA	16364.68	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-8.410;DP=658;FS=31.955;HRun=0;HaplotypeScore=160.7738;InbreedingCoeff=0.9998;MQ=86.48;MQ0=0;MQRankSum=-14.718;QD=100.40;ReadPosRankSum=-3.079;VQSLOD=2.8791;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:78.18:0,78,2134	0/0:10,0:10:30.10:0,30,841	0/0:32,0:32:75.15:0,75,1810	0/0:17,0:17:48.13:0,48,1117	0/0:36,0:36:99:0,99,2669	0/0:38,0:38:99:0,105,2853	0/0:14,0:14:39.13:0,39,1104	1/1:24,16:44:99:4520,120,0	0/0:21,0:21:60.15:0,60,1567	1/1:5,12:19:48.15:1847,48,0	1/1:6,13:25:54.19:2101,54,0	0/0:25,0:25:75.24:0,75,1953	0/0:26,0:26:75.23:0,75,1955	0/0:25,0:25:72.23:0,72,1942	0/0:20,0:20:57.18:0,57,1447	0/0:22,0:22:60.21:0,60,1650	0/0:12,0:12:36.12:0,36,1018	0/0:24,0:24:69.19:0,69,1847	0/0:24,0:24:63.16:0,63,1435	0/0:26,0:26:75.26:0,75,2051	0/0:22,0:22:66.18:0,66,1691	0/0:15,0:15:42.14:0,42,1183	0/0:21,0:21:63.18:0,63,1682	0/0:21,0:21:60.19:0,60,1637	0/0:18,0:18:51.17:0,51,1364	1/1:9,19:30:81.26:3069,81,0	1/1:7,17:26:72.25:3073,72,0	1/1:5,9:19:42.14:1753,42,0
chr10	22375822	.	C	CT	8654.53	PASS	AB=1.000;AC=49;AF=0.907;AN=54;BaseQRankSum=-6.565;DP=307;FS=12.938;HRun=5;HaplotypeScore=28.0044;InbreedingCoeff=0.6356;MQ=66.12;MQ0=0;MQRankSum=-2.816;QD=30.80;ReadPosRankSum=0.800;VQSLOD=3.4947;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,11:12:30.10:395,30,0	1/1:1,6:7:12.04:158,12,0	0/1:8,0:5:14.50:14,0,70	0/0:6,0:4:6.02:0,6,65	0/0:20,0:20:54.09:0,54,561	1/1:2,8:10:21.07:276,21,0	1/1:0,4:4:12.04:158,12,0	1/1:3,24:27:69.22:897,69,0	1/1:1,11:12:33.11:434,33,0	1/1:0,14:14:39.13:513,39,0	1/1:0,6:6:15.05:197,15,0	1/1:0,6:6:18.06:237,18,0	1/1:1,6:7:15.05:197,15,0	1/1:0,11:11:27.09:355,27,0	1/1:2,7:9:15.05:197,15,0	1/1:0,8:8:21.07:276,21,0	1/1:5,21:26:51.17:670,51,0	1/1:4,21:25:62.42:796,62,0	1/1:0,7:7:15.05:195,15,0	1/1:0,10:10:27.05:331,27,0	1/1:1,5:6:15.05:197,15,0	1/1:0,3:3:6.02:79,6,0	1/1:0,3:3:9.03:118,9,0	./.	1/1:1,19:20:51.17:671,51,0	1/1:0,14:14:42.13:539,42,0	1/1:1,12:13:32.92:434,33,0	1/1:0,12:12:24.08:316,24,0
chr10	22376129	.	TG	T	6273.93	PASS	AB=0.855;AC=49;AF=0.875;AN=56;BaseQRankSum=-1.147;DP=532;FS=45.462;HRun=10;HaplotypeScore=70.0696;InbreedingCoeff=0.4602;MQ=60.23;MQ0=9;MQRankSum=2.752;QD=12.78;ReadPosRankSum=4.700;VQSLOD=1.4648;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:49,0:49:54.10:142,54,0	1/1:1,4:5:6:52,6,0	0/0:18,0:8:15.59:0,16,177	0/0:23,0:14:35.67:0,36,327	0/1:10,1:11:11.03:11,0,109	1/1:1,14:15:38.99:339,39,0	1/1:5,19:25:56.02:475,56,0	1/1:29,0:27:27.53:159,28,0	1/1:4,14:18:38.98:339,39,0	1/1:21,0:21:18.26:132,18,0	1/1:10,0:10:19.66:95,20,0	1/1:5,11:16:26.99:234,27,0	1/1:2,18:20:50.99:443,51,0	1/1:4,22:25:62.99:547,63,0	1/1:18,0:17:36.54:179,37,0	1/1:20,0:18:39.34:185,39,0	1/1:6,27:33:68.98:599,69,0	0/1:5,6:11:12.18:135,0,12	1/1:3,12:14:34.99:285,35,0	1/1:4,8:12:23.99:208,24,0	1/1:5,16:20:38.98:339,39,0	1/1:0,2:2:3:26,3,0	1/1:3,5:7:8.62:78,9,0	1/1:3,13:16:26.97:234,27,0	1/1:2,16:18:47.99:416,48,0	0/1:19,0:19:17.50:99,0,17	1/1:39,0:39:74.07:384,74,0	1/1:13,0:13:27.33:139,27,0
chr10	22376138	.	GGA	G	2287.74	PASS	AB=0.947;AC=17;AF=0.304;AN=56;BaseQRankSum=4.995;DP=512;FS=10.866;HRun=0;HaplotypeScore=90.4172;InbreedingCoeff=0.8609;MQ=61.84;MQ0=5;MQRankSum=-0.816;QD=11.33;ReadPosRankSum=2.804;VQSLOD=2.7306;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,46:46:99:1494,105,0	0/0:5,0:5:8.77:0,9,51	0/0:22,0:11:29.02:0,29,413	0/0:28,0:18:40.89:0,41,646	0/0:8,0:8:23.94:0,24,307	0/0:17,0:17:46.68:0,47,280	0/0:24,0:24:50.42:0,50,338	1/1:24,2:26:49.36:319,49,0	0/0:15,0:15:40.63:0,41,229	1/1:15,0:15:12.38:80,12,0	1/1:8,0:8:13.16:38,13,0	0/0:14,0:14:35.06:0,35,228	0/0:20,0:20:53.61:0,54,306	0/0:24,0:24:66.70:0,67,373	1/1:21,0:20:23.59:68,24,0	1/1:19,0:17:26.98:78,27,0	0/0:32,0:32:81.40:0,81,483	0/0:9,0:9:26.21:0,26,192	0/0:17,0:14:28.16:0,28,217	0/0:13,0:12:30.85:0,31,194	0/0:21,0:21:49.68:0,50,306	0/0:2,0:2:2.90:0,3,16	0/0:7,0:6:8.17:0,8,45	0/0:14,0:14:34.94:0,35,197	0/0:17,0:17:48.11:0,48,271	0/1:17,1:18:14.34:180,0,14	1/1:33,0:33:46.04:146,46,0	1/1:15,1:16:19.67:90,20,0
chr10	22376139	.	GA	G	5197.45	PASS	AB=0.986;AC=30;AF=0.536;AN=56;BaseQRankSum=1.244;DP=515;FS=87.425;HRun=2;HaplotypeScore=71.4645;InbreedingCoeff=0.1174;MQ=62.02;MQ0=5;MQRankSum=-0.479;QD=13.40;ReadPosRankSum=6.805;VQSLOD=1.3695;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:46,0:46:99:583,102,0	0/0:4,1:5:2.85:0,3,20	0/0:23,0:11:2.59:0,3,273	0/0:29,0:19:41.18:0,41,546	0/0:9,0:9:20.97:0,21,225	0/1:18,0:18:13.31:13,0,81	0/0:24,0:24:1.52:0,2,71	1/1:3,23:26:62.80:611,63,0	0/1:16,0:16:14.97:15,0,37	1/1:1,14:15:42.13:528,42,0	1/1:0,8:8:21.07:270,21,0	0/1:13,1:14:8.57:9,0,55	0/1:20,0:20:31.91:32,0,44	0/1:24,0:24:30.82:31,0,39	1/1:1,19:19:39.13:499,39,0	1/1:2,17:17:42.14:542,42,0	0/1:32,0:32:26.80:27,0,91	0/1:9,0:9:22.31:22,0,66	0/1:17,0:14:18.58:19,0,60	0/1:12,1:12:46.41:46,0,49	0/0:20,0:20:0.33:0,0,87	0/0:2,0:2:0.89:0,1,2	1/1:6,1:6:6.77:25,7,0	0/0:15,0:15:6.53:0,7,74	0/1:18,0:18:35.45:75,0,35	1/1:2,15:17:47.72:495,48,0	1/1:0,32:33:78.21:993,78,0	1/1:1,15:16:30.01:362,30,0
chr10	22376353	.	C	CT	461.73	PASS	AB=0.975;AC=8;AF=0.143;AN=56;BaseQRankSum=-2.994;DP=538;FS=6.529;HRun=10;HaplotypeScore=57.5659;InbreedingCoeff=0.3982;MQ=73.38;MQ0=5;MQRankSum=-0.429;QD=3.58;ReadPosRankSum=0.885;VQSLOD=-0.5284;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:59.85:0,60,481	0/1:8,1:9:5.07:5,0,162	0/1:46,0:17:10.12:10,0,70	0/1:37,0:18:13.39:13,0,67	0/0:20,2:23:20.88:0,21,350	0/0:21,0:21:50.92:0,51,416	0/0:10,0:10:26.94:0,27,218	0/0:37,0:38:97.89:0,98,790	0/0:17,0:17:50.89:0,51,411	0/0:21,0:21:56.75:0,57,453	0/0:14,0:14:29.93:0,30,243	0/0:17,0:17:44.88:0,45,359	0/0:14,0:14:29.93:0,30,246	0/0:12,0:12:29.93:0,30,241	1/1:4,14:18:5.22:263,5,0	1/1:4,9:13:27.07:287,27,0	0/0:17,0:17:50.85:0,51,405	0/0:15,0:16:43.85:0,44,335	0/0:28,0:28:65.84:0,66,533	0/0:15,0:15:38.92:0,39,318	0/1:5,0:5:17.37:17,0,19	0/0:5,0:6:14.97:0,15,121	0/0:16,0:16:41.92:0,42,342	0/0:8,0:8:20.96:0,21,170	0/0:28,0:28:80.88:0,81,659	0/0:26,0:26:74.91:0,75,614	0/0:21,0:21:50.92:0,51,419	0/0:17,0:17:41.92:0,42,345
chr10	22376604	.	GA	G	481.32	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.615;DP=522;FS=2.507;HRun=9;HaplotypeScore=51.7894;InbreedingCoeff=0.8219;MQ=76.77;MQ0=2;MQRankSum=-2.100;QD=21.88;ReadPosRankSum=1.717;VQSLOD=4.4881;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,111,1271	0/0:11,0:11:33.07:0,33,368	0/0:20,1:20:20.67:0,21,482	0/0:22,0:20:28.54:0,29,350	1/1:1,21:22:63.03:576,63,0	0/0:23,0:23:66.18:0,66,752	0/0:11,0:12:6.80:0,7,226	0/0:32,0:32:90.26:0,90,1030	0/0:15,0:15:45.09:0,45,505	0/0:19,0:20:53.99:0,54,603	0/0:17,0:17:39.11:0,39,443	0/0:9,0:9:27.08:0,27,312	0/0:20,0:20:57.16:0,57,650	0/0:22,1:23:29.66:0,30,573	0/0:19,1:20:29.71:0,30,596	0/0:21,0:21:60.18:0,60,692	0/0:21,0:21:57.17:0,57,658	0/0:11,0:11:27.08:0,27,312	0/0:18,0:18:42.11:0,42,470	0/0:18,1:20:26.52:0,27,531	0/0:12,0:12:30.09:0,30,346	0/0:9,0:9:27.08:0,27,312	0/0:19,0:20:56.97:0,57,611	0/0:11,1:12:5.69:0,6,319	0/0:19,0:19:54.16:0,54,623	0/0:15,0:16:44.96:0,45,492	0/0:29,0:29:81.23:0,81,925	0/0:8,0:8:24.07:0,24,277
chr10	22376735	.	GA	G	2244.55	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=9.959;DP=560;FS=2.499;HRun=9;HaplotypeScore=55.9505;InbreedingCoeff=0.9952;MQ=77.70;MQ0=0;MQRankSum=-0.766;QD=20.22;ReadPosRankSum=0.609;VQSLOD=4.0362;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:45.12:0,45,510	1/1:1,10:11:27.01:247,27,0	0/0:18,0:19:38.19:0,38,423	0/0:9,0:9:13.27:0,13,155	0/0:30,0:30:84.24:0,84,960	0/0:22,0:25:71.68:0,72,750	0/0:12,0:12:36.09:0,36,405	0/0:22,0:22:51.14:0,51,580	1/1:1,19:20:51.03:467,51,0	0/0:36,0:36:96.28:0,96,1097	0/0:25,0:25:66.17:0,66,735	0/0:10,0:10:30.09:0,30,346	0/0:25,0:25:66.15:0,66,725	0/0:24,1:26:41.56:0,42,690	0/0:20,0:20:60.18:0,60,692	0/0:16,0:16:48.12:0,48,537	1/1:3,15:18:33.02:302,33,0	1/1:1,12:13:36.02:329,36,0	1/1:3,13:17:41.02:356,41,0	1/1:2,19:21:51.91:468,52,0	1/1:1,10:11:30.01:275,30,0	0/0:25,0:25:69.18:0,69,776	0/0:24,0:24:60.12:0,60,660	0/0:13,0:13:33.10:0,33,381	0/0:19,0:19:54.16:0,54,623	0/0:24,0:24:69.19:0,69,787	0/0:36,0:36:99:0,102,1174	0/0:15,0:15:39.08:0,39,429
chr10	22377546	.	GGC	G	570.54	PASS	AB=1.000;AC=16;AF=0.286;AN=56;BaseQRankSum=5.972;DP=155;FS=0.000;HRun=0;HaplotypeScore=28.4217;InbreedingCoeff=0.3094;MQ=80.41;MQ0=0;MQRankSum=-0.381;QD=7.61;ReadPosRankSum=3.803;VQSLOD=2.6825;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:26.23:0,26,304	0/1:3,0:3:4.38:4,0,19	0/0:5,0:5:4.35:0,4,36	0/0:5,0:4:4.35:0,4,17	0/1:2,0:2:2.79:3,0,41	0/0:3,0:3:8.99:0,9,115	0/0:7,0:7:21.01:0,21,270	0/0:3,0:3:2.98:0,3,26	1/1:9,0:9:16.52:79,17,0	0/0:1,0:1:3.01:0,3,47	0/0:7,0:7:14.51:0,15,161	0/1:8,0:8:0.23:0,0,279	0/0:7,0:7:20.96:0,21,276	0/0:11,0:11:24.99:0,25,280	0/0:2,0:2:5.97:0,6,67	0/0:4,0:4:9.85:0,10,91	0/1:10,0:10:2.87:76,0,3	0/1:8,0:8:30.83:31,0,64	0/1:6,0:6:19.02:19,0,31	0/1:5,0:5:8.39:46,0,8	0/1:9,0:9:1.83:35,0,2	0/0:5,0:5:12.01:0,12,166	0/0:1,0:1:0:0,0,0	0/0:4,0:4:11.97:0,12,115	0/0:5,0:5:5.18:0,5,132	1/1:1,3:4:9.03:104,9,0	1/1:3,4:7:18.03:194,18,0	1/1:0,4:4:12.04:139,12,0
chr10	22377548	.	CGG	C	1246.46	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=2.329;DP=161;FS=2.816;HRun=9;HaplotypeScore=27.1629;InbreedingCoeff=0.7717;MQ=79.83;MQ0=0;MQRankSum=-0.056;QD=19.79;ReadPosRankSum=4.238;VQSLOD=0.6982;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:23.57:0,24,341	1/1:0,2:2:3.01:35,3,0	0/0:5,0:5:6.41:0,6,41	0/0:5,0:4:2.04:0,2,6	0/0:3,0:3:8.38:0,8,82	0/0:3,0:3:6.02:0,6,98	0/0:7,0:7:15.05:0,15,246	0/0:4,0:4:6.01:0,6,72	1/1:1,9:10:18.05:210,18,0	0/0:5,0:5:13.25:0,13,132	0/0:6,0:6:8.54:0,9,122	0/0:8,0:8:21.94:0,22,322	0/0:8,0:8:24.07:0,24,359	0/0:11,0:11:26.94:0,27,371	0/0:2,0:2:3.01:0,3,49	0/0:5,0:5:9.02:0,9,124	1/1:1,8:9:18.05:209,18,0	1/1:4,4:8:12.03:140,12,0	1/1:1,4:5:12.03:140,12,0	1/1:2,3:5:9.03:105,9,0	1/1:1,8:9:15.04:175,15,0	0/0:5,0:5:12.04:0,12,185	0/0:1,0:1:0:0,0,0	0/0:4,0:4:9.03:0,9,144	0/0:6,0:6:12.77:0,13,158	1/1:4,0:4:9.03:104,9,0	1/1:7,0:7:18.02:187,18,0	1/1:4,0:4:12.04:139,12,0
chr10	22377881	.	GTTT	G	1949.60	PASS	AB=0.837;AC=18;AF=0.321;AN=56;BaseQRankSum=-3.322;DP=441;FS=7.505;HRun=16;HaplotypeScore=90.6720;InbreedingCoeff=0.7492;MQ=69.92;MQ0=4;MQRankSum=2.783;QD=13.26;ReadPosRankSum=4.777;VQSLOD=1.3979;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:21:33.05:0,33,409	0/0:5,0:5:11.98:0,12,118	0/0:15,0:9:3.01:0,3,47	0/1:11,1:9:2.51:3,0,139	0/0:13,0:16:32.99:0,33,341	1/1:10,7:18:35.77:371,36,0	1/1:5,10:15:3.50:219,4,0	0/0:27,0:24:33.06:0,33,500	0/0:6,0:8:18.02:0,18,241	0/0:19,0:19:50.19:0,50,755	0/0:15,0:13:27.05:0,27,391	1/1:7,11:18:28.13:361,28,0	1/1:9,7:16:4:234,4,0	1/1:12,7:21:29.07:285,29,0	0/0:17,0:19:47.19:0,47,737	0/0:13,0:14:30.10:0,30,511	0/0:12,0:13:30.07:0,30,381	0/0:19,0:21:33.95:0,34,420	0/0:11,0:14:39.09:0,39,538	0/0:10,0:10:27.01:0,27,374	0/0:4,0:4:5.99:0,6,49	1/1:2,9:11:23.92:250,24,0	0/1:8,4:12:7.35:88,0,7	1/1:3,6:9:13.35:159,13,0	1/1:9,2:14:4.32:171,4,0	0/0:17,0:19:39.10:0,39,554	0/0:26,0:31:78.24:0,78,1120	0/0:16,0:21:42.13:0,42,581
chr10	22377917	.	G	GA	2395.60	PASS	AB=0.876;AC=34;AF=0.607;AN=56;BaseQRankSum=-3.488;DP=398;FS=1.074;HRun=12;HaplotypeScore=77.1834;InbreedingCoeff=0.3854;MQ=61.34;MQ0=1;MQRankSum=-0.572;QD=9.01;ReadPosRankSum=-0.674;VQSLOD=2.7553;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,1:20:22.76:114,23,0	1/1:1,4:5:12.02:117,12,0	0/1:9,0:7:24.10:24,0,26	0/1:4,0:3:0:0,0,0	0/0:19,1:21:11.73:0,12,233	0/1:6,0:15:2.78:3,0,49	0/0:3,0:19:28.29:0,28,81	1/1:6,12:18:8.11:229,8,0	1/1:2,6:8:6.01:58,6,0	1/1:6,11:17:13.87:258,14,0	1/1:1,9:10:1.94:138,2,0	0/0:9,0:22:21.11:0,21,75	0/0:5,0:16:20.33:0,20,59	0/0:7,0:20:24.15:0,24,73	1/1:10,6:16:4.29:203,4,0	0/1:6,6:12:25.36:84,0,25	1/1:3,7:11:5.19:82,5,0	1/1:7,11:20:17.45:145,17,0	0/1:10,7:17:28.89:183,0,29	1/1:4,6:12:22.06:177,22,0	1/1:0,4:4:9.01:87,9,0	0/0:6,0:16:12.25:0,12,40	0/1:3,0:9:12.37:13,0,12	0/1:1,0:5:1.80:2,0,2	0/0:5,0:18:0.34:0,0,32	1/1:9,4:13:18.08:185,18,0	1/1:6,11:17:30.35:274,30,0	0/1:9,12:21:9.62:198,0,10
chr10	22378470	.	GCTAT	G	3230.05	PASS	AB=0.875;AC=21;AF=0.420;AN=50;BaseQRankSum=7.265;DP=612;FS=0.504;HRun=0;HaplotypeScore=111.5915;InbreedingCoeff=0.8882;MQ=74.95;MQ0=1;MQRankSum=1.037;QD=15.38;ReadPosRankSum=-0.384;VQSLOD=2.7970;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:57.19:0,57,1268	1/1:11,2:13:15.04:208,15,0	./.	./.	0/0:30,0:30:45.01:0,45,931	0/0:23,0:23:30.09:0,30,569	0/0:25,0:25:27.05:0,27,433	./.	1/1:13,7:20:15.05:230,15,0	1/1:5,11:17:33.09:456,33,0	1/1:12,6:18:14.62:174,15,0	1/1:21,10:32:39.03:507,39,0	1/1:15,11:27:39.13:597,39,0	1/1:24,5:29:27.05:335,27,0	0/0:22,0:22:33.11:0,33,750	0/0:32,0:32:54.16:0,54,1095	0/0:21,0:21:30.10:0,30,643	1/1:6,7:13:21.07:322,21,0	1/1:9,2:11:12.03:165,12,0	0/0:20,0:20:30.07:0,30,609	1/1:13,3:16:18.06:276,18,0	0/1:12,2:14:37.84:169,0,38	0/0:13,0:13:12.04:0,12,262	0/0:21,0:21:8.82:0,9,210	0/0:23,0:23:30.10:0,30,680	0/0:22,0:22:30.10:0,30,700	0/0:23,0:23:36.11:0,36,760	0/0:22,0:22:30.10:0,30,676
chr10	22378551	.	ATGTGTGTGTG	A	1686.87	PASS	AB=0.941;AC=21;AF=0.420;AN=50;BaseQRankSum=2.285;DP=544;FS=1.871;HRun=0;HaplotypeScore=190.7307;InbreedingCoeff=0.7408;MQ=58.55;MQ0=13;MQRankSum=-5.325;QD=7.24;ReadPosRankSum=1.188;VQSLOD=2.6672;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:31:1.21:1,0,220	0/0:5,0:9:8.57:0,9,151	./.	./.	0/0:11,0:17:18.06:0,18,575	./.	1/1:20,6:26:1.99:83,2,0	0/0:26,0:24:24.05:0,24,566	0/0:13,0:15:20.95:0,21,354	0/0:17,0:17:25.90:0,26,897	0/0:12,0:12:14.74:0,15,671	1/1:15,5:21:6.02:178,6,0	1/1:17,7:24:9.03:267,9,0	1/1:13,6:20:2.05:86,2,0	1/1:11,0:23:15.52:350,16,0	1/1:10,0:19:12.04:279,12,0	0/0:18,0:20:15.51:0,16,257	0/0:18,0:19:17.34:0,17,269	0/0:8,0:12:15.52:0,16,311	0/0:10,0:16:15:0,15,354	0/0:30,0:28:31.85:0,32,559	1/1:11,5:17:3.01:89,3,0	1/1:7,7:15:6.49:178,6,0	1/1:13,1:13:3.01:86,3,0	1/1:12,10:22:9.03:266,9,0	0/0:22,0:25:22.89:0,23,628	0/0:19,0:23:15.04:0,15,345	0/0:5,0:8:18.06:0,18,590
chr10	22378707	.	T	TC	43.75	PASS	AB=0.781;AC=2;AF=0.036;AN=56;BaseQRankSum=4.348;DP=494;FS=6.617;HRun=0;HaplotypeScore=63.4926;InbreedingCoeff=-0.0322;MQ=67.10;MQ0=16;MQRankSum=-1.291;QD=2.19;ReadPosRankSum=-3.706;VQSLOD=0.2461;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,111,1530	0/0:4,0:4:12.04:0,12,168	0/0:15,0:8:14.20:0,14,213	0/0:12,0:9:22.18:0,22,285	0/0:20,0:20:60.18:0,60,818	0/0:17,0:17:48.16:0,48,671	0/0:20,0:20:57.17:0,57,772	0/0:12,0:12:33.07:0,33,412	0/0:9,0:9:24.08:0,24,335	0/0:18,0:18:54.18:0,54,754	0/0:9,0:8:24.08:0,24,335	0/0:16,0:15:42.14:0,42,580	0/0:27,0:27:78.23:0,78,1054	0/0:20,0:20:48.14:0,48,632	0/0:22,0:20:48.14:0,48,638	0/0:19,0:18:48.16:0,48,671	0/0:21,0:20:57.12:0,57,773	0/0:16,0:15:45.13:0,45,597	0/0:16,0:14:39.10:0,39,523	0/0:22,0:22:57.19:0,57,796	0/0:14,0:13:39.13:0,39,544	0/0:10,0:10:30.10:0,30,419	0/0:17,0:16:42.14:0,42,585	0/0:29,1:29:81.23:0,81,1102	0/1:14,1:15:0.16:0,0,525	0/0:31,0:31:93.26:0,93,1220	0/0:15,3:15:6.39:0,6,547	0/1:2,3:4:29.90:118,0,30
chr10	22378786	.	G	GA	1664.29	PASS	AB=0.800;AC=16;AF=0.286;AN=56;BaseQRankSum=-2.480;DP=466;FS=2.536;HRun=8;HaplotypeScore=91.9372;InbreedingCoeff=0.7248;MQ=46.09;MQ0=29;MQRankSum=-5.101;QD=14.60;ReadPosRankSum=-0.984;VQSLOD=3.6080;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:50.53:0,51,439	1/1:2,1:3:6.02:69,6,0	1/1:5,0:2:0.47:1,0,0	0/0:6,0:2:4.19:0,4,12	0/0:18,0:17:32.90:0,33,290	0/0:17,0:17:45.02:0,45,410	0/0:15,0:14:26.98:0,27,241	0/0:17,0:17:27.15:0,27,334	1/1:8,3:10:12.40:113,12,0	0/1:13,1:11:10.62:11,0,159	0/0:13,0:11:26.99:0,27,242	0/0:12,0:12:23.91:0,24,208	0/0:20,0:18:23.96:0,24,214	0/0:21,0:21:29.68:0,30,266	0/0:21,0:19:26:0,26,224	0/0:13,0:12:20.99:0,21,192	1/1:17,9:23:53.67:563,54,0	1/1:7,7:12:27.08:306,27,0	0/1:9,9:16:15.80:337,0,16	1/1:9,10:19:36.45:375,36,0	1/1:2,2:3:6.02:69,6,0	0/0:9,0:8:15:0,15,137	0/0:27,0:25:23.23:0,23,264	0/0:30,0:26:44.95:0,45,404	0/0:28,0:28:60:0,60,548	0/0:25,0:23:32.96:0,33,298	0/0:18,0:16:29.02:0,29,252	0/0:10,0:8:21:0,21,192
chr10	22378798	.	CA	C	2135.01	PASS	AB=0.851;AC=33;AF=0.589;AN=56;BaseQRankSum=4.410;DP=501;FS=2.793;HRun=15;HaplotypeScore=84.0836;InbreedingCoeff=0.6593;MQ=55.27;MQ0=24;MQRankSum=0.925;QD=6.65;ReadPosRankSum=1.297;VQSLOD=3.0443;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,2:31:6.76:0,7,353	1/1:4,2:7:13.82:83,14,0	0/0:14,0:9:4.19:0,4,44	0/1:13,0:7:8.82:26,0,9	0/1:16,6:23:60:60,0,126	1/1:5,9:18:40.64:235,41,0	1/1:2,5:10:10.54:113,11,0	0/0:17,1:18:32.75:0,33,264	1/1:7,0:6:1.02:17,1,0	0/0:19,1:20:14.41:0,14,201	0/0:16,0:14:13.93:0,14,235	1/1:8,8:15:29.45:188,29,0	1/1:9,7:14:20.65:134,21,0	1/1:14,8:23:36.56:218,37,0	0/0:10,1:15:23.57:0,24,130	0/0:9,0:12:23.40:0,23,153	1/1:19,9:25:39.58:241,40,0	1/1:14,1:13:11.61:74,12,0	1/1:14,8:23:26.59:152,27,0	0/1:15,3:21:3.29:91,0,3	1/1:4,0:3:2.95:19,3,0	1/1:7,3:11:12.77:69,13,0	1/1:13,6:20:5.31:95,5,0	1/1:17,10:24:13.83:209,14,0	1/1:13,16:32:30.74:314,31,0	0/0:19,3:22:9.46:0,9,327	0/0:18,0:16:15.27:0,15,155	0/0:9,0:7:9:0,9,79
chr10	22378867	.	C	CT	13017.64	PASS	AB=1.000;AC=51;AF=0.911;AN=56;BaseQRankSum=-6.383;DP=564;FS=13.741;HRun=9;HaplotypeScore=63.0243;InbreedingCoeff=0.7643;MQ=76.12;MQ0=2;MQRankSum=-2.375;QD=25.33;ReadPosRankSum=1.009;VQSLOD=4.5152;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,24:29:66.18:727,66,0	1/1:2,13:15:39.11:431,39,0	0/0:19,0:17:17.45:0,17,198	0/1:13,0:11:4.58:5,0,40	0/0:30,0:30:77.98:0,78,677	1/1:8,8:16:4.03:273,4,0	1/1:2,11:13:27.07:299,27,0	1/1:5,14:19:19.06:438,19,0	1/1:2,10:12:27.03:285,27,0	1/1:1,18:19:54.13:589,54,0	1/1:9,16:25:48.60:533,49,0	1/1:4,17:22:56.94:602,57,0	1/1:2,16:18:54.13:586,54,0	1/1:4,12:16:13.01:359,13,0	1/1:1,16:17:48.12:523,48,0	1/1:0,17:17:51.10:551,51,0	1/1:2,28:31:84.02:896,84,0	1/1:1,11:12:10.08:338,10,0	1/1:12,12:23:39.10:424,39,0	1/1:6,13:19:39.11:431,39,0	1/1:2,13:15:41.95:446,42,0	1/1:3,21:24:54.06:563,54,0	1/1:1,15:16:36.10:398,36,0	1/1:1,18:19:54.15:597,54,0	1/1:7,29:36:63:868,63,0	1/1:5,28:33:87.18:927,87,0	1/1:3,22:25:63.17:696,63,0	1/1:1,7:8:21.06:232,21,0
chr10	22379887	.	TA	T	4001.37	PASS	AB=0.613;AC=28;AF=0.500;AN=56;BaseQRankSum=9.756;DP=570;FS=1.175;HRun=13;HaplotypeScore=63.2082;InbreedingCoeff=0.7984;MQ=71.09;MQ0=1;MQRankSum=-0.584;QD=14.04;ReadPosRankSum=0.199;VQSLOD=4.2173;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,0:15:24.43:71,24,0	1/1:0,5:5:14.91:109,15,0	0/0:40,0:16:10.68:0,11,54	0/0:29,0:14:0.54:0,1,63	1/1:1,23:24:62.52:456,63,0	0/0:17,0:17:48.08:0,48,467	0/0:10,0:11:32.89:0,33,306	1/1:4,27:32:82.52:595,83,0	0/1:6,6:12:11.34:92,0,11	1/1:5,11:16:32.75:238,33,0	1/1:5,14:20:37.81:269,38,0	0/0:23,0:23:54.08:0,54,519	0/0:17,0:17:36.06:0,36,350	0/0:19,0:19:42.07:0,42,409	0/0:14,1:15:14.12:0,14,289	0/0:28,0:28:63.08:0,63,604	1/1:3,15:21:50.83:346,51,0	0/1:3,11:14:5.32:129,0,5	1/1:3,13:16:38.75:284,39,0	1/1:5,25:36:20.28:415,20,0	1/1:0,8:8:20.88:153,21,0	0/0:21,0:21:43.15:0,43,486	0/0:16,2:18:1.20:0,1,324	0/0:14,2:16:17.14:0,17,322	0/0:31,0:31:73.14:0,73,767	1/1:5,19:24:47.62:350,48,0	1/1:6,22:28:32.48:392,32,0	1/1:3,11:14:16.46:103,16,0
chr10	22380140	.	C	CTT	7954.02	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=4.118;DP=563;FS=22.400;HRun=0;HaplotypeScore=142.3525;InbreedingCoeff=0.9240;MQ=57.88;MQ0=5;MQRankSum=0.253;QD=16.50;ReadPosRankSum=1.534;VQSLOD=3.0047;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:19:34.36:346,34,0	1/1:8,0:8:17.53:113,18,0	0/0:26,0:18:16.37:0,16,340	0/0:37,0:20:45.73:0,46,439	0/0:17,0:18:47.88:0,48,514	1/1:23,2:25:62.26:497,62,0	1/1:17,0:15:21.80:118,22,0	1/1:20,0:20:46.19:468,46,0	1/1:23,0:24:49.82:360,50,0	1/1:28,0:27:67.99:512,68,0	1/1:12,0:12:22.22:128,22,0	1/1:19,3:22:32.91:382,33,0	1/1:19,2:21:30.80:364,31,0	1/1:20,4:24:53.07:456,53,0	1/1:19,0:18:30.90:231,31,0	1/1:21,0:21:44.68:256,45,0	1/1:23,0:23:40.79:404,41,0	1/1:0,0:9:3.01:40,3,0	1/1:13,0:11:32.90:300,33,0	1/1:21,0:21:58.80:466,59,0	1/1:26,0:26:41.45:304,41,0	1/1:10,3:13:26.48:166,26,0	1/1:12,0:11:22.71:146,23,0	1/1:27,2:29:48.59:307,49,0	1/1:14,0:14:30.10:167,30,0	1/1:4,23:27:68.09:763,68,0	1/1:2,16:17:18.53:353,19,0	1/1:4,10:16:17.18:307,17,0
chr10	22380165	.	GTGTGTGTC	G	4622.89	PASS	AB=1.000;AC=27;AF=0.482;AN=56;BaseQRankSum=-5.875;DP=591;FS=2.024;HRun=0;HaplotypeScore=200.2285;InbreedingCoeff=-0.1045;MQ=49.72;MQ0=8;MQRankSum=1.419;QD=10.12;ReadPosRankSum=-5.993;VQSLOD=2.2469;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:26:12.05:12,0,356	0/0:8,0:8:12.03:0,12,150	0/0:17,0:5:1.82:0,2,5	0/0:24,0:8:11.01:0,11,128	0/0:20,0:20:34.26:0,34,807	0/1:21,0:23:99:202,0,340	1/1:28,0:26:14.26:389,14,0	1/1:30,0:30:70.73:659,71,0	0/1:21,0:21:4.46:4,0,213	1/1:3,21:22:57.01:787,57,0	1/1:0,18:18:9.50:249,10,0	0/1:18,0:21:99:107,0,355	0/1:14,0:16:34.85:35,0,572	0/1:22,0:26:99:357,0,494	1/1:20,0:19:9.03:194,9,0	1/1:27,0:27:12.66:724,13,0	0/1:23,0:23:55.86:56,0,273	0/1:7,0:7:4.44:31,0,4	0/1:17,0:14:22.40:22,0,148	0/0:19,0:19:8.51:0,9,157	0/0:31,0:30:5.97:0,6,68	0/1:17,0:20:99:149,0,279	0/1:12,0:11:41.94:91,0,42	0/1:37,0:39:99:350,0,293	0/1:18,0:18:99:154,0,155	0/1:22,0:22:38.99:39,0,526	0/1:18,0:17:12.50:13,0,523	0/0:14,0:14:16.77:0,17,406
chr10	22380171	.	GTC	G	3694.09	PASS	AB=0.944;AC=37;AF=0.661;AN=56;BaseQRankSum=-6.120;DP=560;FS=3.450;HRun=0;HaplotypeScore=156.4331;InbreedingCoeff=0.2162;MQ=52.10;MQ0=8;MQRankSum=-1.063;QD=7.93;ReadPosRankSum=-4.734;VQSLOD=2.5267;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:18.28:0,18,121	1/1:0,7:7:12:141,12,0	0/0:13,0:4:11.95:0,12,103	0/0:25,0:9:6.82:0,7,75	0/0:18,0:18:3.67:0,4,424	0/1:18,3:21:25.44:186,0,25	1/1:29,1:28:1.44:150,1,0	1/1:34,0:34:60.23:497,60,0	1/1:2,19:21:24.06:298,24,0	0/1:22,0:21:3.20:195,0,3	1/1:18,0:18:8.93:62,9,0	0/1:21,0:21:43.70:44,0,52	0/1:16,1:17:32.19:32,0,93	0/1:25,2:27:42.61:88,0,43	1/1:1,0:20:8.74:58,9,0	1/1:2,0:23:32.40:203,32,0	1/1:12,8:20:37.23:429,37,0	1/1:7,0:7:11.90:90,12,0	1/1:12,0:11:20.95:144,21,0	1/1:10,6:16:17.02:259,17,0	1/1:3,26:28:9.03:128,9,0	0/1:20,0:20:1.38:1,0,49	0/1:11,1:11:4.37:39,0,4	0/1:31,5:36:14.21:215,0,14	0/1:16,1:17:5.04:82,0,5	1/1:21,0:21:27.80:280,28,0	1/1:15,0:14:4.10:71,4,0	0/0:13,0:13:2.71:0,3,13
chr10	22380173	.	C	CTG	4890.07	PASS	AB=0.955;AC=31;AF=0.554;AN=56;BaseQRankSum=-5.000;DP=557;FS=3.248;HRun=0;HaplotypeScore=156.5280;InbreedingCoeff=0.5969;MQ=53.29;MQ0=8;MQRankSum=3.006;QD=13.15;ReadPosRankSum=-4.548;VQSLOD=3.5390;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,21:25:17.95:282,18,0	0/0:7,0:7:6.38:0,6,24	0/0:13,0:4:11.46:0,11,105	0/0:25,0:8:11.46:0,11,128	0/0:16,0:16:35.31:0,35,425	1/1:17,3:20:41.99:511,42,0	1/1:25,4:27:44.34:486,44,0	1/1:33,0:33:32.57:215,33,0	0/1:21,0:21:17.23:17,0,43	0/1:23,0:22:6.47:91,0,6	0/0:18,0:18:7.98:0,8,38	1/1:12,8:20:25.23:319,25,0	0/1:12,5:17:6.15:409,0,6	1/1:21,8:29:62.26:708,62,0	0/0:20,0:19:8.52:0,9,43	0/0:22,0:22:31.38:0,31,160	0/0:20,0:20:4.50:0,4,58	1/1:7,0:7:1.67:24,2,0	0/1:10,0:9:3.32:3,0,4	0/0:16,0:16:8.32:0,8,45	0/0:28,0:27:7.53:0,8,30	1/1:15,5:20:18.62:258,19,0	1/1:11,2:12:14.60:114,15,0	1/1:33,6:39:48.82:630,49,0	1/1:14,3:17:23.37:196,23,0	1/1:21,0:21:27.70:240,28,0	1/1:16,0:15:16.24:230,16,0	0/1:12,0:12:4.72:157,0,5
chr10	22380177	.	GTC	G	1694.46	PASS	AB=0.966;AC=20;AF=0.357;AN=56;BaseQRankSum=-0.363;DP=565;FS=9.219;HRun=0;HaplotypeScore=164.3902;InbreedingCoeff=0.7676;MQ=56.53;MQ0=9;MQRankSum=-2.944;QD=8.43;ReadPosRankSum=0.078;VQSLOD=2.4154;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:26.57:0,27,260	1/1:6,1:7:12:143,12,0	0/0:17,0:6:14.63:0,15,198	0/1:25,1:13:9.37:9,0,140	0/0:15,0:15:35.16:0,35,561	0/0:19,0:19:42.45:0,42,449	0/0:29,0:27:44.80:0,45,521	0/0:30,0:30:29.26:0,29,439	1/1:21,2:23:29.99:337,30,0	0/0:23,0:22:47.33:0,47,414	0/0:18,0:18:2.12:0,2,4	0/0:22,0:22:29.29:0,29,399	0/0:17,0:17:39.07:0,39,445	0/0:29,0:29:63.60:0,64,559	1/1:20,0:19:8.68:54,9,0	1/1:22,0:22:32.34:200,32,0	1/1:20,2:22:41.80:452,42,0	1/1:7,0:7:14.85:109,15,0	1/1:2,10:11:28.72:211,29,0	1/1:15,0:15:12.17:217,12,0	1/1:26,0:25:9.03:127,9,0	0/0:20,0:20:29.10:0,29,320	0/0:12,0:11:17.84:0,18,233	0/0:39,0:39:39.90:0,40,649	0/0:18,0:18:27.22:0,27,356	0/1:20,0:20:39.44:39,0,393	0/0:18,0:17:20.51:0,21,374	0/0:12,0:12:2.18:0,2,262
chr10	22381309	.	T	TA	18694.30	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=-18.382;DP=824;FS=5.140;HRun=2;HaplotypeScore=72.3839;InbreedingCoeff=0.9998;MQ=65.93;MQ0=0;MQRankSum=0.118;QD=39.52;ReadPosRankSum=-0.157;VQSLOD=5.1227;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,36:40:99:1556,108,0	1/1:1,9:10:27.09:389,27,0	0/0:22,0:22:60.17:0,60,723	0/0:27,0:26:58.78:0,59,761	0/0:34,0:34:90.27:0,90,1102	0/0:21,0:21:60.19:0,60,744	0/0:19,0:19:54.17:0,54,669	1/1:2,33:35:96.31:1363,96,0	1/1:1,33:34:93.31:1339,93,0	1/1:0,28:28:81.26:1148,81,0	1/1:2,34:35:99:1426,99,0	0/0:28,0:28:84.26:0,84,1041	0/0:55,0:55:99:0,150,1859	0/0:37,0:37:99:0,111,1376	1/1:2,39:41:99:1469,102,0	1/1:1,24:25:66.22:951,66,0	1/1:1,28:29:87.27:1232,87,0	1/1:1,23:24:66.22:950,66,0	1/1:1,22:23:66.20:918,66,0	1/1:1,19:20:57.19:821,57,0	1/1:3,41:44:99:1724,120,0	0/0:21,0:21:60.19:0,60,744	0/0:21,0:21:63.19:0,63,769	0/0:36,0:36:96.30:0,96,1190	0/0:30,0:30:90.28:0,90,1116	1/1:1,31:32:93.31:1338,93,0	1/1:2,39:41:99:1598,111,0	1/1:0,11:11:33.11:473,33,0
chr10	22382204	.	G	GGT	2914.36	PASS	AB=0.935;AC=35;AF=0.625;AN=56;BaseQRankSum=-6.912;DP=351;FS=12.073;HRun=0;HaplotypeScore=62.3457;InbreedingCoeff=0.2033;MQ=75.56;MQ0=0;MQRankSum=-0.443;QD=10.37;ReadPosRankSum=-3.130;VQSLOD=1.5389;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,0:5:5.93:57,6,0	1/1:0,5:6:9.03:156,9,0	0/0:15,0:15:19.95:0,20,344	0/1:15,0:13:7.71:8,0,278	0/1:25,0:25:49.81:50,0,94	0/1:14,0:14:39.36:39,0,110	0/1:7,1:8:23.21:49,0,23	1/1:0,0:18:53.20:394,53,0	1/1:0,6:8:14.92:234,15,0	1/1:1,0:16:39.03:218,39,0	1/1:1,0:8:20.45:121,20,0	0/0:12,0:12:1.71:0,2,70	0/1:14,0:14:46.13:46,0,64	0/1:15,0:15:13.86:14,0,81	0/0:14,0:14:0.54:0,1,47	0/1:16,0:16:10.09:10,0,97	1/1:1,12:14:17.95:285,18,0	1/1:1,1:6:5.85:69,6,0	1/1:1,1:10:29.96:365,30,0	1/1:1,12:14:29.65:320,30,0	1/1:1,5:6:3.01:55,3,0	0/1:11,0:11:2.55:3,0,74	0/0:14,0:14:6.61:0,7,123	0/0:2,0:2:4.31:0,4,14	0/0:13,0:13:11.70:0,12,73	1/1:5,0:16:31.08:221,31,0	1/1:3,0:16:21.07:178,21,0	0/1:2,0:19:4.93:198,0,5
chr10	22383561	.	AG	A	995.48	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=8.957;DP=752;FS=0.688;HRun=1;HaplotypeScore=71.3939;InbreedingCoeff=0.9959;MQ=84.33;MQ0=0;MQRankSum=-4.255;QD=29.28;ReadPosRankSum=0.998;VQSLOD=3.4011;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,33:34:84.27:1090,84,0	0/0:14,0:14:42.14:0,42,671	0/0:29,0:29:81.22:0,81,1233	0/0:33,0:33:86.31:0,86,1368	0/0:31,0:31:93.30:0,93,1459	0/0:25,0:25:75.26:0,75,1199	0/0:19,0:19:57.19:0,57,907	0/0:39,0:39:99:0,117,1827	0/0:35,0:35:99:0,105,1655	0/0:28,0:28:84.29:0,84,1343	0/0:20,0:20:60.19:0,60,936	0/0:26,0:26:64.28:0,64,1185	0/0:33,0:33:99:0,99,1573	0/0:27,0:27:81.25:0,81,1264	0/0:32,0:31:96.31:0,96,1512	0/0:35,0:35:99:0,105,1655	0/0:33,0:33:99:0,99,1573	0/0:9,0:9:24.08:0,24,383	0/0:22,0:22:66.22:0,66,1020	0/0:22,0:22:66.23:0,66,1053	0/0:24,0:24:72.22:0,72,1103	0/0:23,0:23:69.24:0,69,1103	0/0:33,0:33:99:0,99,1582	0/0:26,0:26:78.27:0,78,1241	0/0:26,0:26:78.27:0,78,1247	0/0:28,0:28:84.29:0,84,1342	0/0:38,0:38:99:0,114,1790	0/0:8,0:8:24.08:0,24,384
chr10	22385102	.	AT	A	3100.60	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=13.305;DP=541;FS=1.234;HRun=9;HaplotypeScore=50.1742;InbreedingCoeff=0.9888;MQ=74.18;MQ0=0;MQRankSum=-0.371;QD=22.97;ReadPosRankSum=-1.221;VQSLOD=3.9193;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:24.06:0,24,269	0/0:9,0:9:27.07:0,27,302	0/0:14,0:14:32.94:0,33,363	0/0:10,0:10:24.05:0,24,250	0/0:36,0:36:96.29:0,96,1108	0/0:28,0:28:75.22:0,75,865	0/0:21,0:21:54.13:0,54,610	1/1:11,21:32:59.99:543,60,0	0/0:16,0:16:42.12:0,42,484	1/1:0,23:23:69.04:631,69,0	1/1:0,24:24:72.04:659,72,0	0/0:19,0:19:48.12:0,48,536	0/0:15,0:15:42.12:0,42,476	0/0:20,0:20:54.12:0,54,608	0/0:18,0:18:51.15:0,51,588	0/0:26,0:26:66.19:0,66,753	0/0:13,0:13:33.10:0,33,381	0/0:15,0:15:42.12:0,42,485	0/0:21,0:21:48.14:0,48,546	0/0:25,0:25:72.21:0,72,831	0/0:18,0:18:42.10:0,42,465	0/0:15,0:15:11.72:0,12,379	0/0:22,0:22:66.19:0,66,753	0/0:5,0:5:15.04:0,15,173	0/0:30,1:31:41.74:0,42,734	1/1:0,20:20:60.03:549,60,0	1/1:1,26:27:72.04:659,72,0	1/1:0,9:9:27.01:247,27,0
chr10	22386788	.	GCC	G	247.52	PASS	AB=0.811;AC=29;AF=0.853;AN=34;BaseQRankSum=1.892;DP=65;FS=2.533;HRun=2;HaplotypeScore=35.8313;InbreedingCoeff=0.1180;MQ=99.25;MQ0=3;MQRankSum=-2.003;QD=4.50;ReadPosRankSum=1.725;VQSLOD=-0.7118;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,1:3:0.89:2,1,0	./.	0/1:7,0:5:2.61:3,0,46	0/1:13,0:4:7.93:11,0,8	./.	./.	1/1:1,4:5:9.48:52,9,0	./.	1/1:0,1:1:2.68:11,3,0	1/1:0,1:1:2.97:20,3,0	./.	0/1:0,2:2:3.08:24,0,3	1/1:3,2:5:10.10:66,10,0	1/1:1,0:1:0.47:1,0,0	1/1:2,0:2:3.47:26,3,0	0/0:0,1:1:2.04:0,2,6	./.	1/1:1,0:1:2.96:19,3,0	1/1:0,1:1:2.98:22,3,0	1/1:1,1:2:2.60:10,3,0	./.	./.	./.	1/1:3,1:4:6.03:21,6,0	1/1:0,2:3:2.74:12,3,0	1/1:0,2:2:5.93:40,6,0	./.	./.
chr10	22386791	.	ACCATTATGG	A	924.59	PASS	AC=26;AF=0.813;AN=32;BaseQRankSum=1.798;DP=54;FS=28.409;HRun=0;HaplotypeScore=37.4070;InbreedingCoeff=0.2912;MQ=105.85;MQ0=2;MQRankSum=-2.905;QD=40.20;ReadPosRankSum=2.794;VQSLOD=1.3104;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,1:3:3.01:30,3,0	./.	0/0:8,0:5:10.85:0,11,126	0/0:15,0:4:0.18:0,0,92	./.	./.	1/1:0,3:4:8.70:134,9,0	./.	1/1:0,1:1:3.01:60,3,0	1/1:0,1:1:3.01:69,3,0	./.	1/1:0,1:2:6.02:95,6,0	1/1:0,2:2:6.02:138,6,0	./.	./.	1/1:0,1:1:3.01:43,3,0	./.	1/1:1,0:1:3.01:58,3,0	1/1:0,1:1:3.01:71,3,0	1/1:0,1:1:3.01:59,3,0	1/1:1,1:2:2.96:19,3,0	./.	./.	1/1:1,1:2:6.02:114,6,0	0/0:1,2:3:2.94:0,3,18	1/1:0,2:2:6.02:138,6,0	./.	./.
chr10	22388683	.	C	CA	5059.98	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-13.469;DP=682;FS=15.934;HRun=7;HaplotypeScore=67.9519;InbreedingCoeff=0.9981;MQ=68.97;MQ0=3;MQRankSum=-0.644;QD=31.23;ReadPosRankSum=1.353;VQSLOD=3.5169;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:75.10:0,75,718	0/0:6,0:6:18.03:0,18,174	0/0:42,0:30:69.75:0,70,636	0/0:31,0:25:45.52:0,46,562	0/0:30,0:30:75.09:0,75,719	0/0:23,0:23:63.10:0,63,608	0/0:24,0:24:60.09:0,60,579	1/1:5,26:31:78.20:913,78,0	0/0:22,0:22:60.08:0,60,573	1/1:5,34:39:99:1219,102,0	1/1:1,25:26:69.21:834,69,0	0/0:17,0:17:45.06:0,45,430	0/0:25,0:25:69.09:0,69,660	0/0:27,0:27:75.09:0,75,717	0/0:15,0:15:42.07:0,42,405	0/0:32,0:32:81.13:0,81,782	0/0:17,0:17:43.56:0,44,398	0/0:22,0:22:54.04:0,54,513	0/0:21,0:20:54.05:0,54,509	0/0:34,0:34:96.15:0,96,927	0/0:23,0:23:47.81:0,48,463	0/0:16,0:16:45.05:0,45,427	0/0:14,0:14:36.03:0,36,338	0/0:27,0:27:72.09:0,72,688	0/0:24,0:24:63.09:0,63,608	1/1:3,28:31:58.37:971,58,0	1/1:2,23:25:66.20:797,66,0	1/1:0,10:10:27.08:326,27,0
chr10	22389339	.	CTA	C	3177.72	PASS	AB=0.903;AC=21;AF=0.404;AN=52;BaseQRankSum=10.911;DP=331;FS=0.000;HRun=0;HaplotypeScore=43.8793;InbreedingCoeff=0.6773;MQ=69.02;MQ0=1;MQRankSum=-1.346;QD=21.33;ReadPosRankSum=2.453;VQSLOD=3.7126;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	1/1:0,6:6:15.05:185,15,0	0/0:4,0:4:0:0,0,0	0/0:9,0:6:2.63:0,3,14	0/0:24,0:24:60.19:0,60,943	0/0:12,0:12:24.08:0,24,387	0/0:3,0:3:3.01:0,3,49	0/0:30,1:31:20.22:0,20,815	1/1:0,11:10:27.08:332,27,0	0/1:9,1:10:9.85:10,0,365	0/0:16,0:16:36.12:0,36,574	0/1:8,1:9:15.86:16,0,273	0/0:8,0:8:18.04:0,18,268	0/0:11,0:11:27.09:0,27,437	1/1:1,6:7:18.06:222,18,0	1/1:0,12:12:24.08:295,24,0	1/1:1,19:20:48.15:591,48,0	1/1:3,19:22:51.16:628,51,0	1/1:6,15:22:19.07:536,19,0	1/1:2,8:12:29.76:323,30,0	1/1:3,6:9:18.06:222,18,0	./.	0/0:5,0:5:9.03:0,9,147	0/0:6,0:6:15.05:0,15,245	0/0:15,0:15:39.13:0,39,636	0/0:17,0:17:39.13:0,39,634	0/0:20,1:21:17.30:0,17,791	0/1:8,1:9:12.85:13,0,305
chr10	22390928	.	A	ACAAC	8058.10	PASS	AB=0.611;AC=22;AF=0.393;AN=56;BaseQRankSum=18.729;DP=722;FS=9.027;HRun=0;HaplotypeScore=168.7100;InbreedingCoeff=-0.3726;MQ=60.98;MQ0=1;MQRankSum=-7.433;QD=15.41;ReadPosRankSum=7.668;VQSLOD=3.2615;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:11,1:32:99:506,0,157	1/1:0,0:15:11.37:385,11,0	0/0:7,0:6:18.02:0,18,219	0/1:19,0:17:34.68:35,0,269	0/0:31,0:31:93.32:0,93,1821	0/1:5,0:14:83.66:196,0,84	0/1:7,0:24:99:277,0,178	0/0:31,0:31:87.28:0,87,1467	1/1:2,0:19:6.41:611,6,0	0/0:27,0:27:81.27:0,81,1574	0/0:23,0:23:69.18:0,69,1228	0/1:4,0:25:51.06:267,0,51	0/1:4,0:39:27.47:490,0,27	0/1:8,0:41:99:418,0,136	0/1:8,0:36:99:921,0,142	0/1:6,0:31:99:840,0,114	0/1:9,0:18:99:442,0,174	0/1:5,0:12:46.57:131,0,47	0/1:11,0:24:99:459,0,314	0/1:11,0:32:99:784,0,193	0/1:10,1:19:80.64:81,0,223	0/1:8,0:30:99:284,0,278	0/1:4,0:23:24.19:284,0,24	0/1:10,0:42:99:425,0,273	0/1:8,0:24:99:223,0,155	0/0:37,0:37:99:0,108,2059	0/0:31,0:31:90.31:0,90,1778	0/0:12,0:12:36.12:0,36,752
chr10	22391218	.	G	GAGA	17580.05	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=-12.130;DP=570;FS=3.876;HRun=0;HaplotypeScore=76.3008;InbreedingCoeff=0.9736;MQ=78.39;MQ0=0;MQRankSum=-1.913;QD=54.26;ReadPosRankSum=-0.182;VQSLOD=6.9380;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,1:3:3.01:65,3,0	1/1:1,6:7:18.06:388,18,0	0/0:15,0:15:31.92:0,32,470	0/0:14,0:14:31.83:0,32,377	0/0:36,0:36:96.31:0,96,1476	0/0:23,0:23:57.18:0,57,868	0/0:14,0:14:39.13:0,39,607	1/1:9,22:32:75.24:1568,75,0	1/1:1,17:19:48.16:1038,48,0	1/1:1,31:32:90.31:1919,90,0	1/1:4,28:32:87.25:1836,87,0	0/0:23,0:23:69.23:0,69,1080	0/0:25,0:25:63.21:0,63,982	0/0:26,0:26:72.25:0,72,1127	1/1:3,22:25:69.24:1492,69,0	1/1:3,17:20:51.17:1093,51,0	1/1:1,9:10:27.09:584,27,0	1/1:1,10:11:24.08:498,24,0	1/1:3,14:17:48.16:1001,48,0	1/1:6,32:39:96.26:2018,96,0	1/1:2,13:15:39.13:843,39,0	0/0:19,0:19:48.15:0,48,731	0/0:17,0:17:48.16:0,48,751	0/0:18,0:18:45.15:0,45,703	0/0:16,0:16:42.14:0,42,657	1/1:5,22:29:72.21:1440,72,0	1/1:1,21:23:63.05:1340,63,0	1/1:1,8:9:21.07:454,21,0
chr10	22391402	.	A	AATCT	3469.07	PASS	AB=0.782;AC=30;AF=0.600;AN=50;BaseQRankSum=2.179;DP=421;FS=6.018;HRun=0;HaplotypeScore=100.8740;InbreedingCoeff=0.5528;MQ=69.36;MQ0=4;MQRankSum=-3.740;QD=13.14;ReadPosRankSum=-1.174;VQSLOD=2.1155;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,3:14:9.03:208,9,0	1/1:8,0:9:9.03:158,9,0	./.	./.	0/1:12,7:19:18.49:519,0,18	0/0:16,0:17:21.06:0,21,301	0/0:7,0:7:3.01:0,3,45	./.	1/1:13,5:18:21.07:482,21,0	1/1:13,0:12:9.03:184,9,0	1/1:28,0:28:6.49:121,6,0	0/0:3,0:3:3.01:0,3,45	0/0:11,0:11:6.01:0,6,70	0/0:15,0:15:18.06:0,18,271	0/1:16,4:20:21.39:353,0,21	0/0:15,0:15:3.01:0,3,45	1/1:13,0:13:3.01:30,3,0	1/1:4,0:4:9.03:149,9,0	1/1:16,0:16:9.03:158,9,0	1/1:27,0:29:23.86:397,24,0	1/1:14,0:14:6.02:97,6,0	0/0:4,0:4:6.02:0,6,90	0/0:8,0:8:15.05:0,15,225	1/1:4,2:7:6.02:127,6,0	0/0:7,0:7:12.03:0,12,161	1/1:23,0:22:15.05:255,15,0	1/1:24,0:23:12.03:176,12,0	1/1:12,0:12:3.01:56,3,0
chr10	22391473	.	AATAT	A	7814.88	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-7.572;DP=359;FS=0.995;HRun=0;HaplotypeScore=91.1524;InbreedingCoeff=0.8646;MQ=69.80;MQ0=4;MQRankSum=-4.992;QD=36.01;ReadPosRankSum=-0.446;VQSLOD=4.8404;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,9:12:18.06:307,18,0	1/1:2,4:6:9.03:154,9,0	0/0:8,0:8:2.90:0,3,16	0/0:14,0:11:2.46:0,2,118	0/0:6,0:30:64.81:0,65,325	0/0:6,0:17:27.09:0,27,521	0/0:1,0:2:6.02:0,6,128	1/1:10,19:31:66.21:1066,66,0	1/1:3,7:10:24.07:384,24,0	1/1:2,9:10:24.08:406,24,0	1/1:4,22:27:62.07:948,62,0	0/0:2,0:2:6.02:0,6,104	0/0:2,0:7:15.05:0,15,262	0/0:2,0:7:15.05:0,15,244	0/0:1,0:9:25.38:0,25,125	0/0:1,0:9:22.38:0,22,100	1/1:2,11:13:32.71:562,33,0	1/1:5,10:15:21.07:358,21,0	1/1:4,11:16:36.12:591,36,0	1/1:4,10:14:30.57:454,31,0	1/1:0,11:10:27.09:461,27,0	0/0:1,0:2:3.01:0,3,53	0/0:3,0:8:15.05:0,15,258	0/0:2,0:3:5.66:0,6,40	0/0:6,0:22:57.20:0,57,1067	1/1:3,20:22:57.18:933,57,0	1/1:1,14:16:36.10:577,36,0	1/1:0,12:12:36.12:614,36,0
chr10	22397209	.	TGG	T	8985	PASS	AB=0.747;AC=47;AF=0.839;AN=56;BaseQRankSum=-6.640;DP=475;FS=4.401;HRun=11;HaplotypeScore=76.0357;InbreedingCoeff=0.6466;MQ=69.36;MQ0=1;MQRankSum=-1.514;QD=21.60;ReadPosRankSum=4.386;VQSLOD=4.4634;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,10:14:24.05:255,24,0	1/1:5,5:10:15.02:157,15,0	0/0:17,0:10:18.58:0,19,201	0/1:6,0:7:12.88:13,0,44	0/0:15,0:18:11.04:0,11,136	1/1:5,11:16:33.07:351,33,0	1/1:3,11:15:32.81:331,33,0	0/1:5,1:17:4.08:4,0,58	1/1:2,14:16:36.09:383,36,0	1/1:7,14:22:35.40:411,35,0	1/1:2,19:21:48.11:510,48,0	1/1:3,18:21:51.11:542,51,0	1/1:3,25:28:75.17:798,75,0	1/1:2,10:12:27.05:286,27,0	0/1:9,1:19:10.96:11,0,56	0/0:3,1:24:18.74:0,19,134	1/1:2,10:12:24.06:255,24,0	1/1:1,9:10:24.02:244,24,0	1/1:6,9:15:29.08:293,29,0	1/1:4,19:23:54.12:573,54,0	1/1:3,10:12:30.07:318,30,0	1/1:0,8:8:21.01:211,21,0	1/1:1,18:19:51.13:542,51,0	1/1:2,15:17:42.09:447,42,0	1/1:7,22:29:60.12:638,60,0	1/1:3,10:13:33.01:326,33,0	1/1:4,26:30:78.18:829,78,0	1/1:1,8:9:24.06:255,24,0
chr10	22397219	.	GGA	G	2215.98	PASS	AB=0.975;AC=31;AF=0.554;AN=56;BaseQRankSum=8.591;DP=455;FS=4.261;HRun=0;HaplotypeScore=93.1838;InbreedingCoeff=0.0229;MQ=70.82;MQ0=1;MQRankSum=-2.690;QD=6.04;ReadPosRankSum=10.552;VQSLOD=1.1663;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:12,0:12:23.83:42,0,24	1/1:5,1:6:12.44:70,12,0	0/0:18,0:11:14.85:0,15,246	0/1:7,1:8:27.24:27,0,84	0/0:14,0:14:29.04:0,29,320	0/1:13,1:14:16.25:84,0,16	0/1:15,0:15:47.57:85,0,48	0/0:20,0:20:41.48:0,41,344	1/1:14,0:14:30.99:142,31,0	0/1:22,0:22:31.75:32,0,111	0/1:21,0:21:4.97:126,0,5	0/1:20,1:21:1.63:142,0,2	0/1:28,1:29:5.27:197,0,5	1/1:10,0:10:24.31:120,24,0	0/0:13,0:13:18.73:0,19,143	0/0:23,0:23:44.17:0,44,293	0/1:11,0:11:1.47:62,0,1	0/1:10,0:10:0.53:41,0,1	0/1:13,1:14:75.61:76,0,80	0/1:21,0:21:16.76:133,0,17	1/1:11,1:11:10.07:102,10,0	1/1:8,0:8:15.72:70,16,0	1/1:19,1:20:19.67:163,20,0	0/1:17,0:17:7.63:120,0,8	1/1:23,1:24:25.17:178,25,0	0/1:15,1:16:54.72:55,0,109	1/1:28,1:28:24.62:282,25,0	0/1:13,0:13:45.42:45,0,85
chr10	22398336	.	TG	T	2195.31	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.581;DP=760;FS=15.101;HRun=2;HaplotypeScore=71.9294;InbreedingCoeff=0.9996;MQ=84.53;MQ0=0;MQRankSum=-1.404;QD=33.26;ReadPosRankSum=0.884;VQSLOD=2.2191;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,129,1933	0/0:12,0:12:36.11:0,36,519	0/0:17,0:17:48.15:0,48,696	0/0:29,0:29:69.87:0,70,1018	0/0:27,0:27:81.24:0,81,1158	0/0:26,0:26:78.26:0,78,1154	0/0:25,0:25:75.24:0,75,1105	0/0:39,0:39:99:0,117,1661	0/0:17,0:17:51.17:0,51,763	0/0:31,0:31:93.31:0,93,1389	0/0:18,0:18:54.17:0,54,790	0/0:38,0:38:99:0,114,1709	0/0:36,0:36:99:0,108,1532	0/0:37,0:37:99:0,108,1619	1/1:0,34:34:99:1285,99,0	1/1:3,29:32:81.21:1032,81,0	0/0:17,0:17:51.17:0,51,756	0/0:16,0:16:48.16:0,48,719	0/0:15,0:15:36.12:0,36,540	0/0:34,0:34:99:0,102,1509	0/0:48,0:48:99:0,141,2062	0/0:20,0:20:60.20:0,60,898	0/0:23,0:23:69.23:0,69,1032	0/0:27,0:27:81.27:0,81,1214	0/0:16,0:16:48.16:0,48,708	0/0:35,0:35:99:0,105,1574	0/0:37,0:36:99:0,108,1617	0/0:10,0:10:30.10:0,30,450
chr10	22399454	.	CATATATCTATCT	C	2809.49	PASS	AB=0.922;AC=7;AF=0.125;AN=56;BaseQRankSum=5.331;DP=553;FS=5.950;HRun=0;HaplotypeScore=201.6905;InbreedingCoeff=0.4958;MQ=68.15;MQ0=3;MQRankSum=-6.026;QD=28.96;ReadPosRankSum=-0.213;VQSLOD=2.6998;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:18,0:26:99:178,0,518	0/0:7,0:7:17.12:0,17,214	0/0:16,0:15:32.21:0,32,366	0/0:14,0:7:17.87:0,18,140	0/0:26,0:26:62.69:0,63,1303	0/0:29,0:29:81.05:0,81,2600	0/0:15,0:15:32.99:0,33,462	0/0:48,0:47:99:0,135,1365	0/1:13,0:13:55.71:56,0,129	0/0:18,0:18:53.98:0,54,1883	0/0:27,0:27:81.15:0,81,3400	0/0:13,0:13:33.09:0,33,1465	0/0:22,0:22:66.10:0,66,2343	0/0:18,0:18:51.09:0,51,1951	1/1:0,17:17:18.06:656,18,0	1/1:1,19:20:35.97:1258,36,0	0/0:14,0:14:25.50:0,26,271	0/0:21,0:20:52.99:0,53,1071	0/0:16,0:16:44.26:0,44,386	0/1:21,0:21:99:804,0,119	0/0:9,0:9:20.33:0,20,166	0/0:20,0:20:57.04:0,57,1552	0/0:24,0:24:72.09:0,72,2515	0/0:4,0:4:12.04:0,12,691	0/0:27,0:27:81.10:0,81,2766	0/0:23,0:23:69.10:0,69,2035	0/0:27,0:27:71.90:0,72,2174	0/0:18,0:18:47.64:0,48,2078
chr10	22399457	.	A	ATATC	2591.03	PASS	AB=0.870;AC=13;AF=0.260;AN=50;BaseQRankSum=-6.760;DP=567;FS=6.263;HRun=0;HaplotypeScore=127.6914;InbreedingCoeff=0.5421;MQ=67.04;MQ0=4;MQRankSum=0.490;QD=14.16;ReadPosRankSum=-1.273;VQSLOD=2.5172;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:6.17:0,6,170	0/0:4,0:8:3:0,3,28	./.	./.	1/1:18,0:32:16.71:263,17,0	0/0:29,0:29:36.12:0,36,545	1/1:12,4:16:3.01:69,3,0	./.	0/0:7,0:14:18.02:0,18,167	0/0:19,0:19:21.07:0,21,318	0/1:28,1:29:18.32:18,0,652	1/1:3,11:15:24.08:556,24,0	0/0:21,0:22:30.09:0,30,434	0/0:18,0:18:27.09:0,27,401	0/0:17,0:17:12.48:0,12,112	0/0:20,0:20:24.24:0,24,221	0/0:11,0:13:3:0,3,28	0/1:14,0:20:30.50:30,0,142	0/0:8,0:15:15.02:0,15,140	0/0:7,0:19:22.44:0,22,198	0/0:9,0:9:1.25:0,1,3	0/0:20,0:20:21.05:0,21,296	0/0:24,0:25:33.09:0,33,462	0/0:4,0:4:9.03:0,9,136	0/0:27,0:27:30.10:0,30,454	1/1:15,8:23:27.09:532,27,0	0/1:13,14:29:12.33:661,0,12	1/1:9,9:18:27.09:625,27,0
chr10	22399928	.	T	TA	4101.78	PASS	AB=0.745;AC=25;AF=0.446;AN=56;BaseQRankSum=-0.291;DP=654;FS=1.906;HRun=1;HaplotypeScore=198.6881;InbreedingCoeff=-0.8072;MQ=50.63;MQ0=16;MQRankSum=-2.435;QD=7.40;ReadPosRankSum=0.317;VQSLOD=0.6960;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:17,4:21:99:121,0,107	0/1:11,5:16:99:206,0,199	0/0:38,2:16:21.60:0,22,447	0/0:34,1:10:15.24:0,15,233	0/0:24,0:23:58.42:0,58,783	0/1:13,8:20:99:148,0,183	0/1:14,4:19:99:104,0,119	0/1:30,4:32:99:193,0,626	0/1:14,14:27:99:308,0,365	0/1:20,10:32:99:464,0,581	0/1:20,9:29:66.14:172,0,66	0/1:11,6:17:68.34:68,0,264	0/1:10,12:21:99:198,0,290	0/1:13,7:20:99:144,0,222	0/1:12,10:22:99:205,0,257	0/1:12,14:26:99:251,0,136	0/1:18,2:21:99:101,0,142	0/1:11,0:11:16.43:16,0,325	0/1:8,7:13:99:144,0,294	0/1:12,12:22:70.57:71,0,228	0/1:11,1:12:29.88:30,0,190	0/1:11,11:21:68.77:69,0,247	0/1:12,9:21:90.76:125,0,91	0/1:6,4:10:39.07:39,0,75	0/1:21,15:35:78.73:79,0,303	0/1:16,15:31:99:427,0,476	0/1:14,20:34:99:368,0,396	0/1:6,0:8:52.05:52,0,188
chr10	22399944	.	GGATA	G	2368.64	PASS	AB=0.939;AC=18;AF=0.333;AN=54;BaseQRankSum=4.254;DP=680;FS=1.186;HRun=0;HaplotypeScore=210.9360;InbreedingCoeff=0.7291;MQ=51.68;MQ0=25;MQRankSum=1.708;QD=10.77;ReadPosRankSum=1.366;VQSLOD=3.0613;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:24:23.53:0,24,535	0/1:17,1:18:15.89:16,0,609	./.	0/0:45,0:11:0.47:0,0,1	0/0:18,0:28:20.60:0,21,320	1/1:6,15:20:21.98:372,22,0	1/1:14,4:18:3.01:48,3,0	0/0:39,0:38:40.64:0,41,522	0/1:25,2:26:60.75:61,0,605	0/0:12,0:22:39.13:0,39,680	0/0:14,0:28:3.01:0,3,39	0/0:19,0:19:29.89:0,30,709	1/1:12,11:22:21.07:329,21,0	1/1:12,9:21:32.49:515,32,0	0/0:13,0:19:23.91:0,24,567	0/0:17,0:27:23.91:0,24,560	0/0:24,0:24:27.17:0,27,559	0/0:13,0:14:25.90:0,26,553	0/0:15,0:13:21.07:0,21,497	0/0:24,0:22:33.11:0,33,736	0/0:11,0:11:12.04:0,12,284	1/1:9,12:20:30.10:470,30,0	1/1:16,3:19:9.03:141,9,0	1/1:6,4:10:9.03:141,9,0	1/1:19,22:40:29.17:469,29,0	0/0:21,0:31:42.14:0,42,961	0/0:20,0:30:45.15:0,45,1063	0/0:8,0:8:18.06:0,18,425
chr10	22400860	.	T	TG	5296.46	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-12.718;DP=582;FS=0.000;HRun=8;HaplotypeScore=52.1951;InbreedingCoeff=0.9980;MQ=87.28;MQ0=0;MQRankSum=-2.949;QD=25.22;ReadPosRankSum=4.131;VQSLOD=5.2597;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,22:27:39.12:450,39,0	0/0:9,0:9:27.01:0,27,247	0/0:29,0:29:65.99:0,66,594	0/0:17,0:17:26.86:0,27,229	0/0:20,0:20:54.01:0,54,489	1/1:3,26:29:75.22:863,75,0	1/1:3,13:16:30.09:346,30,0	0/0:39,0:40:98.99:0,99,887	0/0:20,0:20:54.02:0,54,494	0/0:21,0:21:51.02:0,51,464	0/0:16,0:16:42:0,42,379	1/1:4,12:16:36.10:408,36,0	1/1:2,19:21:51.15:588,51,0	1/1:1,21:22:23.69:526,24,0	0/0:22,0:22:57.02:0,57,522	0/0:19,0:19:54:0,54,485	0/0:25,0:25:65.97:0,66,588	0/0:11,0:11:27.01:0,27,247	0/0:14,0:14:36.02:0,36,329	0/0:25,0:25:66.01:0,66,599	0/0:9,0:9:21:0,21,192	1/1:3,12:15:36.11:415,36,0	1/1:7,20:27:32.71:630,33,0	1/1:2,10:12:33.10:379,33,0	1/1:3,22:25:60.18:692,60,0	0/0:28,0:28:69.01:0,69,626	0/0:36,0:36:93.02:0,93,846	0/0:11,0:11:24.01:0,24,220
chr10	22404150	.	GT	G	1266.59	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=4.237;DP=615;FS=1.223;HRun=6;HaplotypeScore=92.2099;InbreedingCoeff=0.9880;MQ=70.58;MQ0=7;MQRankSum=-4.852;QD=19.49;ReadPosRankSum=1.291;VQSLOD=3.0492;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,17:19:15.73:247,16,0	0/0:13,0:13:27.09:0,27,355	0/0:24,0:19:27.27:0,27,528	0/0:32,0:25:29.67:0,30,414	0/0:27,0:27:78.25:0,78,1024	0/0:35,0:35:78.24:0,78,1013	0/0:12,0:12:33.11:0,33,434	0/0:41,0:41:93.77:0,94,1225	0/0:18,0:18:36.12:0,36,474	0/0:29,0:28:72.23:0,72,939	0/0:19,0:18:48.16:0,48,632	0/0:15,0:15:36.12:0,36,474	0/0:17,0:17:38.96:0,39,511	0/0:18,0:18:54.16:0,54,696	1/1:2,18:20:51.12:548,51,0	1/1:4,22:26:57.14:613,57,0	0/0:16,0:16:48.11:0,48,608	0/0:6,0:6:18.06:0,18,236	0/0:18,0:18:48.06:0,48,589	0/0:21,0:21:33.11:0,33,428	0/0:12,0:12:18.05:0,18,217	0/0:17,0:17:45.15:0,45,592	0/0:31,0:30:66.69:0,67,869	0/0:16,0:16:30.10:0,30,395	0/0:17,0:17:48.11:0,48,612	0/0:34,0:32:90.29:0,90,1178	0/0:36,0:33:78.17:0,78,986	0/0:25,0:22:45.15:0,45,592
chr10	22404186	.	TCTTC	T	1785.45	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=1.762;DP=585;FS=1.159;HRun=0;HaplotypeScore=139.3840;InbreedingCoeff=0.8590;MQ=52.47;MQ0=19;MQRankSum=-2.187;QD=20.52;ReadPosRankSum=-1.146;VQSLOD=3.0841;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:32.63:0,33,404	1/1:0,9:9:14.88:249,15,0	0/0:44,0:11:25.41:0,25,489	0/0:67,0:26:41.72:0,42,541	0/0:26,0:26:59.82:0,60,1053	0/0:30,0:30:66.22:0,66,1236	0/0:14,0:14:41.80:0,42,559	0/0:27,0:25:51.10:0,51,825	1/1:13,0:13:24.08:305,24,0	0/0:24,0:23:41.40:0,41,616	0/0:18,0:16:22.41:0,22,520	0/0:18,0:18:33.09:0,33,553	0/0:18,0:18:26.68:0,27,359	0/0:18,0:18:45.11:0,45,750	0/0:20,0:20:47.18:0,47,748	0/0:19,0:19:51.04:0,51,836	0/1:21,0:21:18.42:493,0,18	1/1:4,0:4:12.04:169,12,0	1/1:11,0:11:27.08:360,27,0	1/1:18,0:18:27:295,27,0	1/1:1,10:11:6.02:98,6,0	0/0:17,0:17:42.03:0,42,631	0/0:25,0:24:44.85:0,45,701	0/0:9,0:9:9.72:0,10,94	0/0:12,0:12:27.09:0,27,475	0/0:26,0:24:61.11:0,61,761	0/0:32,0:29:53.77:0,54,506	0/0:21,0:18:37.96:0,38,465
chr10	22404190	.	CCTTCCT	C	2604.16	PASS	AB=0.935;AC=14;AF=0.250;AN=56;BaseQRankSum=3.691;DP=579;FS=1.614;HRun=0;HaplotypeScore=150.1463;InbreedingCoeff=0.5756;MQ=52.15;MQ0=18;MQRankSum=-4.580;QD=19.15;ReadPosRankSum=2.220;VQSLOD=3.2539;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:35.70:0,36,502	0/1:11,0:10:29.22:93,0,29	0/0:44,0:11:25.41:0,25,489	0/0:61,0:23:41.72:0,42,541	0/0:24,0:25:62.48:0,62,1141	0/0:31,0:31:66.22:0,66,1465	0/0:16,0:16:40.49:0,40,678	0/0:27,0:25:50.75:0,51,819	1/1:0,11:13:24.08:535,24,0	0/0:23,0:22:4.23:0,4,472	0/1:17,0:15:10.71:11,0,466	0/0:19,0:19:32.96:0,33,645	0/0:17,0:17:29.49:0,29,472	0/0:19,0:19:45.11:0,45,852	0/0:22,0:21:51.99:0,52,845	0/0:17,0:17:51.04:0,51,902	0/1:13,7:20:19.04:778,0,19	1/1:5,0:5:15.05:206,15,0	1/1:1,9:11:30.05:462,30,0	1/1:1,15:18:30.10:558,30,0	1/1:12,0:12:6.02:119,6,0	0/0:17,0:17:41.63:0,42,674	0/0:25,0:24:44.78:0,45,801	0/0:9,0:9:14.07:0,14,144	0/0:13,0:13:27.09:0,27,600	0/0:24,0:22:42.13:0,42,694	0/1:29,0:26:21.57:22,0,296	0/0:20,0:17:25.17:0,25,425
chr10	22404194	.	C	CCTCTCT	3212.81	PASS	AC=26;AF=0.542;AN=48;BaseQRankSum=-9.490;DP=633;FS=8.741;HRun=0;HaplotypeScore=169.7179;InbreedingCoeff=0.8677;MQ=50.11;MQ0=21;MQRankSum=-1.723;QD=10.36;ReadPosRankSum=-2.320;VQSLOD=1.9513;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:17:19.60:183,20,0	0/0:11,0:10:15.02:0,15,200	./.	./.	1/1:32,0:30:14.55:152,15,0	1/1:21,0:41:2.15:210,2,0	1/1:16,0:18:12.82:253,13,0	./.	0/0:13,0:13:24.08:0,24,331	0/0:21,0:20:29.94:0,30,355	0/0:15,0:13:11.89:0,12,130	1/1:11,10:22:12.04:325,12,0	1/1:9,8:21:21.07:500,21,0	1/1:15,5:28:12.04:333,12,0	1/1:22,0:20:11.98:145,12,0	1/1:24,0:22:12.01:132,12,0	0/0:18,0:21:21.13:0,21,248	./.	0/0:10,0:10:9.03:0,9,125	0/0:17,0:17:22.20:0,22,181	0/0:12,0:12:6.01:0,6,63	1/1:12,7:27:9.03:282,9,0	1/1:14,9:26:8.45:227,8,0	1/1:10,0:11:14.53:262,15,0	1/1:9,7:18:15.05:402,15,0	0/0:21,0:19:15:0,15,187	0/0:29,0:26:45.05:0,45,543	0/0:19,0:16:9.03:0,9,126
chr10	22404197	.	CTCTCTCT	C	1580.61	PASS	AB=0.787;AC=5;AF=0.089;AN=56;BaseQRankSum=5.729;DP=632;FS=5.492;HRun=0;HaplotypeScore=169.3905;InbreedingCoeff=-0.1120;MQ=49.02;MQ0=24;MQRankSum=-5.025;QD=15.50;ReadPosRankSum=6.468;VQSLOD=1.9690;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:28.25:0,28,962	0/0:13,0:12:24.08:0,24,557	0/0:42,0:9:21.07:0,21,266	0/0:57,0:18:38.91:0,39,425	0/0:32,0:30:56.83:0,57,1060	0/0:40,0:40:66.66:0,67,1604	0/0:18,0:18:39.13:0,39,1057	0/0:22,0:19:15.14:0,15,176	0/0:13,0:13:0.25:0,0,53	0/1:13,7:19:55.22:453,0,55	0/1:13,3:14:81.85:158,0,82	0/0:21,0:20:33.06:0,33,858	0/0:22,0:22:30.10:0,30,825	0/0:27,0:27:39.60:0,40,765	0/0:21,0:19:36.09:0,36,779	0/0:25,0:23:48.16:0,48,991	0/0:20,0:20:43.58:0,44,445	0/0:5,0:5:15:0,15,168	0/0:11,0:10:17.72:0,18,228	0/0:19,0:19:18.70:0,19,256	0/0:16,0:16:15.04:0,15,307	0/0:26,0:26:36.13:0,36,664	0/0:29,0:28:42.02:0,42,923	0/0:12,0:12:18.06:0,18,575	0/0:18,0:17:24.08:0,24,605	0/1:13,5:16:99:211,0,118	0/1:16,12:25:55.98:735,0,56	0/1:17,3:17:67.98:141,0,68
chr10	22405077	.	A	AAGAT	4555.59	PASS	AB=1.000;AC=28;AF=0.538;AN=52;BaseQRankSum=-8.863;DP=571;FS=0.000;HRun=0;HaplotypeScore=138.3823;InbreedingCoeff=0.7779;MQ=61.12;MQ0=0;MQRankSum=-5.207;QD=13.97;ReadPosRankSum=-2.004;VQSLOD=4.3099;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:12.01:0,12,112	1/1:9,0:9:3.01:49,3,0	./.	./.	1/1:27,17:45:48.16:1031,48,0	0/0:15,0:15:20.62:0,21,195	0/1:17,0:17:0:0,0,0	1/1:48,0:48:6.23:15,6,0	1/1:16,0:16:12.04:195,12,0	1/1:23,0:23:24.04:334,24,0	1/1:20,0:20:6.02:83,6,0	0/0:17,0:17:21.02:0,21,195	0/0:23,0:23:41.01:0,41,353	0/0:21,0:21:25.84:0,26,229	0/0:24,0:24:37.34:0,37,308	0/0:25,0:25:20.77:0,21,179	1/1:23,0:23:8.90:147,9,0	1/1:12,0:12:21.04:279,21,0	1/1:18,0:18:12.04:178,12,0	1/1:32,0:32:39.13:618,39,0	1/1:7,0:8:3.01:48,3,0	0/0:8,0:11:11.23:0,11,90	0/0:25,0:25:30.03:0,30,279	0/0:14,0:14:9.01:0,9,83	0/0:27,0:27:45.05:0,45,419	0/1:17,0:17:15.65:443,0,16	1/1:28,0:28:42.14:754,42,0	1/1:10,0:10:21.07:380,21,0
chr10	22405106	.	AG	A	164.26	PASS	AB=0.718;AC=2;AF=0.037;AN=54;BaseQRankSum=2.383;DP=560;FS=5.797;HRun=1;HaplotypeScore=139.6421;InbreedingCoeff=-0.0459;MQ=56.47;MQ0=1;MQRankSum=0.737;QD=3.73;ReadPosRankSum=3.333;VQSLOD=0.6088;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:39.71:0,40,415	0/0:7,0:7:11.04:0,11,114	./.	0/0:5,0:3:6.02:0,6,77	0/0:35,0:35:93.25:0,93,1182	0/0:17,0:17:40.96:0,41,449	0/0:13,0:13:35.82:0,36,499	0/0:51,0:51:99:0,153,1870	0/0:15,0:15:18.06:0,18,263	0/0:23,0:23:59.22:0,59,843	0/0:19,0:19:40.20:0,40,557	0/0:18,0:18:43.18:0,43,455	0/0:23,0:23:46.90:0,47,430	0/0:19,0:19:43.43:0,43,480	0/1:12,12:24:99:167,0,149	0/1:14,6:20:85.80:86,0,173	0/0:23,0:23:12.51:0,13,169	0/0:12,0:12:27.07:0,27,387	0/0:17,0:17:48.13:0,48,697	0/0:42,0:42:97.63:0,98,1105	0/0:9,0:9:21.04:0,21,279	0/0:11,0:11:27.55:0,28,329	0/0:21,0:21:47.85:0,48,468	0/0:9,0:9:19.72:0,20,235	0/0:26,0:26:55.65:0,56,513	0/0:29,0:29:87.29:0,87,1325	0/0:31,0:31:45.15:0,45,662	0/0:13,0:13:21.07:0,21,306
chr10	22405108	.	ATAG	A	594.55	PASS	AB=0.938;AC=9;AF=0.167;AN=54;BaseQRankSum=10.886;DP=566;FS=1.356;HRun=0;HaplotypeScore=154.5920;InbreedingCoeff=-0.2091;MQ=56.53;MQ0=1;MQRankSum=-0.344;QD=3.16;ReadPosRankSum=11.003;VQSLOD=0.8898;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:26:61.15:61,0,243	0/0:6,0:6:8.96:0,9,102	./.	0/0:5,0:3:9.01:0,9,98	0/0:35,0:35:93.30:0,93,1516	0/1:18,0:18:1.64:2,0,349	0/0:13,0:13:35.62:0,36,417	0/0:54,0:54:99:0,158,1766	0/0:15,0:15:17.87:0,18,264	0/0:22,0:22:57.12:0,57,831	0/0:19,0:19:41.99:0,42,501	0/0:20,0:20:0.46:0,0,386	0/1:25,0:25:35.20:35,0,343	0/1:19,0:19:13.15:13,0,335	0/1:12,12:24:71.42:355,0,71	0/1:15,6:21:99:189,0,123	0/0:23,0:23:12.04:0,12,174	0/0:13,0:13:29.75:0,30,434	0/0:17,0:17:46.35:0,46,673	0/0:41,0:41:99:0,105,1192	0/0:9,0:9:20.76:0,21,229	0/0:11,0:11:2.13:0,2,237	0/1:21,0:21:20.25:20,0,290	0/1:8,0:8:2.30:2,0,134	0/1:26,0:26:44.56:45,0,320	0/0:29,0:29:87.21:0,87,1083	0/0:31,0:31:45.15:0,45,629	0/0:13,0:13:21.07:0,21,295
chr10	22405110	.	AG	A	971.29	PASS	AB=0.796;AC=11;AF=0.196;AN=56;BaseQRankSum=7.297;DP=573;FS=0.404;HRun=1;HaplotypeScore=131.9471;InbreedingCoeff=-0.2685;MQ=56.99;MQ0=1;MQRankSum=-0.527;QD=4.38;ReadPosRankSum=9.321;VQSLOD=-0.3733;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:26:10.31:10,0,282	0/0:6,0:6:8:0,8,71	0/0:4,0:2:6.01:0,6,59	0/0:4,0:2:5.99:0,6,50	0/0:35,0:35:93.26:0,93,1199	0/1:12,7:19:66.12:66,0,196	0/0:12,0:12:3.26:0,3,148	0/0:52,0:52:99:0,126,1459	0/0:15,0:15:17.84:0,18,175	0/0:23,0:23:58.55:0,59,595	0/0:18,0:18:37.15:0,37,491	0/1:14,6:20:81.94:82,0,181	0/1:12,14:26:99:172,0,182	0/1:10,8:18:99:102,0,138	0/1:25,0:25:99:189,0,119	0/1:22,0:22:99:104,0,176	0/0:23,0:23:12.35:0,12,104	0/0:13,0:13:29.76:0,30,333	0/0:17,0:17:47.55:0,48,472	0/0:41,0:41:93.06:0,93,784	0/0:9,0:9:20.69:0,21,209	0/1:9,3:12:21.68:22,0,146	0/1:10,10:20:99:148,0,108	0/1:6,2:8:24.34:24,0,49	0/1:12,14:26:99:197,0,128	0/0:29,0:29:85.10:0,85,602	0/0:32,0:32:40.64:0,41,226	0/0:18,0:18:20.32:0,20,113
chr10	22405112	.	ATAG	A	1670.67	PASS	AB=0.752;AC=9;AF=0.161;AN=56;BaseQRankSum=8.509;DP=591;FS=0.405;HRun=0;HaplotypeScore=148.7137;InbreedingCoeff=-0.2167;MQ=58.08;MQ0=1;MQRankSum=0.604;QD=9.49;ReadPosRankSum=11.551;VQSLOD=1.7472;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:6.40:0,6,491	0/0:7,0:7:8.96:0,9,105	0/0:5,0:3:9.03:0,9,117	0/0:4,0:2:6.02:0,6,73	0/0:35,0:35:93.28:0,93,1500	0/1:13,7:20:99:172,0,121	0/0:11,0:11:16.38:0,16,119	0/0:52,0:52:99:0,157,2365	0/0:16,0:16:17.87:0,18,274	0/0:28,0:28:75.18:0,75,1248	0/0:21,0:21:48.02:0,48,593	0/1:13,6:19:87.87:201,0,88	0/1:14,14:28:99:356,0,114	0/1:10,8:18:74.55:224,0,75	0/1:26,0:26:23.56:24,0,408	0/0:21,0:21:4.65:0,5,452	0/0:23,0:23:12.04:0,12,183	0/0:13,0:13:33.11:0,33,583	0/0:21,0:21:60.15:0,60,1009	0/0:40,0:40:99:0,102,1338	0/0:8,0:8:21.07:0,21,284	0/1:9,3:12:71.61:72,0,80	0/1:9,10:19:54.72:284,0,55	0/1:6,2:8:42.37:61,0,42	0/1:12,14:26:63.41:418,0,63	0/0:31,0:31:93.30:0,93,1501	0/0:35,0:35:48.16:0,48,710	0/0:19,0:19:21.07:0,21,316
chr10	22406643	.	G	GT	4789.61	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-13.320;DP=617;FS=6.729;HRun=9;HaplotypeScore=59.9556;InbreedingCoeff=0.9967;MQ=75.35;MQ0=0;MQRankSum=-0.539;QD=26.61;ReadPosRankSum=-0.568;VQSLOD=5.0951;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:23.99:0,24,208	0/0:11,0:11:32.99:0,33,287	0/0:19,0:19:35.57:0,36,295	0/0:13,0:13:29.02:0,29,241	0/0:22,0:22:62.96:0,63,542	0/0:31,0:31:83.96:0,84,725	0/0:13,0:13:38.99:0,39,339	1/1:6,25:31:78.14:827,78,0	1/1:4,15:19:42.11:465,42,0	1/1:5,19:24:30.62:541,31,0	1/1:4,23:27:63.17:695,63,0	0/0:13,0:13:35.99:0,36,312	0/0:37,0:37:92.94:0,93,804	0/0:28,2:30:53.79:0,54,692	0/0:24,0:25:37.63:0,38,513	0/0:37,0:38:85.53:0,86,888	0/0:11,0:11:23.99:0,24,208	0/0:10,0:10:17.98:0,18,156	0/0:21,0:21:44.95:0,45,387	0/0:27,0:27:74.98:0,75,651	0/0:13,0:13:35.99:0,36,313	0/0:26,0:26:71.97:0,72,622	0/0:26,2:28:35.76:0,36,533	0/0:7,0:8:23.03:0,23,188	0/0:30,1:31:59.80:0,60,748	1/1:0,37:37:99:1200,111,0	1/1:6,26:31:69.19:763,69,0	1/1:0,10:10:27.07:299,27,0
chr10	22407769	.	GC	G	9657.80	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=18.321;DP=694;FS=7.855;HRun=1;HaplotypeScore=94.0535;InbreedingCoeff=0.9994;MQ=87.69;MQ0=0;MQRankSum=-2.682;QD=39.26;ReadPosRankSum=2.522;VQSLOD=5.1068;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,32:32:93.31:1300,93,0	1/1:0,11:11:24.08:336,24,0	0/0:23,0:23:69.17:0,69,1015	0/0:25,0:25:58.16:0,58,1030	0/0:32,0:32:96.31:0,96,1506	0/0:17,0:17:51.16:0,51,792	0/0:18,0:18:54.12:0,54,833	0/0:40,0:40:99:0,117,1787	1/1:0,26:26:75.25:1049,75,0	0/0:28,0:28:81.26:0,81,1253	0/0:14,0:14:42.14:0,42,671	0/0:19,0:19:57.18:0,57,887	0/0:49,0:49:99:0,147,2321	0/0:32,0:32:96.33:0,96,1527	1/1:0,29:29:84.28:1175,84,0	1/1:0,30:30:84.28:1175,84,0	1/1:0,10:10:27.09:378,27,0	1/1:1,9:10:27.05:346,27,0	1/1:1,22:23:66.22:923,66,0	1/1:0,41:41:99:1719,123,0	1/1:0,34:34:90.26:1259,90,0	0/0:18,0:18:54.17:0,54,838	0/0:16,0:16:48.13:0,48,720	0/0:16,0:16:48.15:0,48,739	0/0:26,0:25:78.26:0,78,1225	0/0:30,0:30:90.30:0,90,1418	0/0:31,0:31:93.28:0,93,1434	0/0:14,0:14:42.14:0,42,671
chr10	22407981	.	TAG	T	5234.72	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=14.169;DP=467;FS=6.942;HRun=0;HaplotypeScore=60.9132;InbreedingCoeff=0.9869;MQ=72.01;MQ0=0;MQRankSum=0.284;QD=37.66;ReadPosRankSum=-1.396;VQSLOD=6.3771;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,14:17:33.11:472,33,0	0/0:10,0:10:30.09:0,30,520	0/0:9,0:9:21.05:0,21,318	0/0:4,0:4:12.04:0,12,209	0/0:20,0:20:51.16:0,51,906	0/0:23,0:23:69.24:0,69,1248	0/0:14,0:14:39.12:0,39,685	1/1:0,20:20:60.17:823,60,0	0/0:18,0:18:48.16:0,48,880	1/1:0,15:15:42.13:585,42,0	1/1:1,9:10:27.09:387,27,0	0/0:20,0:20:60.21:0,60,1090	0/0:23,0:23:63.22:0,63,1153	0/0:28,0:28:78.27:0,78,1421	0/0:20,0:20:57.20:0,57,1045	0/0:32,0:32:87.30:0,87,1586	0/0:12,0:12:27.09:0,27,494	0/0:8,0:8:24.08:0,24,439	0/0:10,0:10:27.09:0,27,495	0/0:12,0:12:36.11:0,36,630	0/0:6,0:6:12.04:0,12,210	0/0:11,0:11:33.11:0,33,598	0/0:13,0:13:36.12:0,36,659	0/0:11,0:11:30.10:0,30,550	0/0:24,0:24:69.24:0,69,1265	1/1:1,24:25:72.15:947,72,0	1/1:0,37:37:96.32:1375,96,0	1/1:0,15:15:45.15:645,45,0
chr10	22408081	.	A	AT	8775.46	PASS	AB=0.588;AC=37;AF=0.661;AN=56;BaseQRankSum=-10.231;DP=408;FS=8.870;HRun=8;HaplotypeScore=35.7106;InbreedingCoeff=0.8741;MQ=70.70;MQ0=0;MQRankSum=-1.236;QD=27.08;ReadPosRankSum=0.492;VQSLOD=4.8186;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,13:14:33.10:381,33,0	0/0:4,0:4:12.01:0,12,110	0/0:9,0:8:18.94:0,19,124	0/0:3,0:2:2.60:0,3,10	1/1:1,21:22:63.19:727,63,0	1/1:4,21:25:51.15:589,51,0	0/1:3,7:10:9.33:155,0,9	1/1:9,25:34:75.22:863,75,0	0/0:7,0:7:21.01:0,21,192	1/1:4,18:22:57.15:642,57,0	1/1:1,12:13:36.11:415,36,0	1/1:2,10:12:27.08:312,27,0	1/1:5,13:18:39.12:449,39,0	1/1:2,18:20:48.14:554,48,0	1/1:3,16:19:42.12:485,42,0	1/1:0,19:19:57.17:658,57,0	0/0:15,0:15:39.02:0,39,357	0/0:4,0:4:9:0,9,82	0/0:15,0:15:36.02:0,36,329	0/0:17,0:17:48.02:0,48,439	0/0:10,0:10:24.01:0,24,220	1/1:1,14:15:42.12:485,42,0	1/1:1,7:8:18.05:208,18,0	1/1:0,4:4:9.03:104,9,0	1/1:3,9:13:27.08:308,27,0	1/1:4,15:19:45.13:517,45,0	1/1:8,12:20:42.11:474,42,0	1/1:4,13:17:39.12:450,39,0
chr10	22409936	.	C	CAA	3206.69	PASS	AB=0.735;AC=33;AF=0.589;AN=56;BaseQRankSum=-6.582;DP=508;FS=11.927;HRun=14;HaplotypeScore=80.5960;InbreedingCoeff=0.6485;MQ=54.35;MQ0=26;MQRankSum=0.388;QD=10.02;ReadPosRankSum=-2.360;VQSLOD=0.5358;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:39:74.09:0,74,598	1/1:1,0:8:12.49:62,12,0	0/0:6,0:4:5.71:0,6,37	0/1:6,0:5:0.18:0,0,58	0/0:10,0:35:51.97:0,52,228	1/1:9,8:20:27.06:328,27,0	1/1:4,11:21:44.04:434,44,0	0/0:8,0:27:48.11:0,48,199	0/1:5,0:10:7.74:33,0,8	0/0:4,0:15:29.80:0,30,126	0/0:7,0:12:16:0,16,69	1/1:4,10:12:12.04:157,12,0	1/1:11,7:18:21.07:274,21,0	1/1:21,6:26:19.86:315,20,0	1/1:7,4:13:14.53:163,15,0	1/1:3,12:15:36.11:460,36,0	0/1:11,0:22:34.63:35,0,49	1/1:0,1:8:5.52:67,6,0	0/1:11,3:14:22.24:115,0,22	1/1:13,1:26:9.65:141,10,0	1/1:6,0:14:16.72:59,17,0	1/1:4,6:12:19.60:171,20,0	0/1:8,5:16:2.35:171,0,2	1/1:10,9:20:26.23:272,26,0	1/1:10,4:17:14.98:155,15,0	0/0:5,0:12:24.65:0,25,105	0/0:5,0:16:35.66:0,36,152	0/0:2,0:11:30.06:0,30,127
chr10	22411151	.	C	CTCTT	9422.77	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-12.757;DP=693;FS=4.383;HRun=0;HaplotypeScore=103.5926;InbreedingCoeff=0.9968;MQ=81.96;MQ0=0;MQRankSum=-5.359;QD=70.32;ReadPosRankSum=2.808;VQSLOD=7.3345;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:39.12:0,39,722	1/1:0,6:7:18.06:493,18,0	0/0:24,0:24:59.81:0,60,1078	0/0:13,0:14:36.12:0,36,643	0/0:44,0:44:99:0,126,2396	0/0:28,0:28:81.25:0,81,1503	0/0:21,0:21:63.20:0,63,1181	0/0:33,0:33:90.30:0,90,1694	1/1:3,23:26:69.24:1840,69,0	0/0:27,0:27:81.27:0,81,1541	0/0:18,0:18:54.17:0,54,1005	0/0:32,0:32:90.29:0,90,1710	0/0:30,0:30:84.29:0,84,1628	0/0:17,0:17:48.16:0,48,930	0/0:42,0:42:99:0,126,2434	0/0:37,0:37:99:0,111,2082	1/1:0,18:18:54.19:1479,54,0	1/1:0,6:6:18.06:492,18,0	1/1:7,15:23:60.21:1603,60,0	1/1:3,29:34:99:2369,99,0	1/1:1,16:20:45.15:1147,45,0	0/0:35,0:35:99:0,102,1910	0/0:27,0:27:75.24:0,75,1411	0/0:9,0:9:27.09:0,27,523	0/0:33,0:33:96.33:0,96,1861	0/0:35,0:35:99:0,102,1960	0/0:27,0:27:72.24:0,72,1343	0/0:12,0:12:36.12:0,36,697
chr10	22411625	.	A	AACACACAC	4939.13	PASS	AB=0.692;AC=31;AF=0.574;AN=54;BaseQRankSum=-3.920;DP=769;FS=1.569;HRun=0;HaplotypeScore=193.3629;InbreedingCoeff=0.5725;MQ=64.48;MQ0=8;MQRankSum=-3.306;QD=9.90;ReadPosRankSum=-3.945;VQSLOD=3.2809;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:42:29.03:0,29,1237	0/0:9,0:9:15.05:0,15,211	./.	0/0:33,0:16:3:0,3,25	0/0:15,0:15:36.08:0,36,698	0/1:11,0:29:48.32:236,0,48	1/1:8,0:19:11.03:103,11,0	1/1:39,0:38:36.63:338,37,0	0/0:23,0:23:18.15:0,18,440	1/1:11,12:24:36.46:833,36,0	0/1:15,15:34:0:0,0,0	1/1:14,0:30:14.49:121,14,0	1/1:7,0:27:8.58:86,9,0	1/1:9,0:27:29.99:264,30,0	1/1:9,1:28:11.66:437,12,0	1/1:11,0:26:0.03:100,0,0	0/0:24,0:24:23.91:0,24,316	0/0:22,0:22:13.92:0,14,181	0/1:25,0:24:49.93:50,0,336	0/0:30,0:30:39:0,39,552	0/0:37,0:36:29.06:0,29,420	1/1:8,0:18:17.42:167,17,0	1/1:8,0:24:14.60:135,15,0	0/1:19,0:45:8.25:241,0,8	0/1:7,0:26:90.48:202,0,90	1/1:11,15:36:54.12:1060,54,0	1/1:23,0:24:34.19:458,34,0	1/1:4,0:14:6.02:107,6,0
chr10	22411651	.	CAT	C	2603.44	PASS	AB=0.822;AC=16;AF=0.286;AN=56;BaseQRankSum=3.720;DP=747;FS=0.405;HRun=0;HaplotypeScore=121.6143;InbreedingCoeff=0.1793;MQ=56.36;MQ0=10;MQRankSum=1.316;QD=8.04;ReadPosRankSum=1.909;VQSLOD=3.2883;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:40.61:0,41,1111	1/1:0,11:11:15.05:227,15,0	0/0:27,0:8:10.17:0,10,144	0/0:32,0:12:12.67:0,13,177	0/0:20,0:20:32.28:0,32,646	0/0:24,0:24:47.65:0,48,483	0/0:20,0:20:24.13:0,24,294	0/1:34,0:33:99:132,0,509	1/1:2,21:23:28.69:493,29,0	0/1:23,0:22:4.70:5,0,360	0/0:21,0:21:11.83:0,12,86	0/0:26,0:26:38.82:0,39,356	0/0:27,0:27:31.79:0,32,290	0/0:29,0:29:48.43:0,48,515	0/0:32,0:32:47.69:0,48,409	0/1:25,0:25:14.16:14,0,198	0/1:5,16:21:4.99:299,0,5	0/1:4,20:23:7.87:225,0,8	1/1:8,25:32:45.67:711,46,0	0/1:6,24:30:20.51:314,0,21	0/1:8,32:39:13.08:246,0,13	0/0:22,0:22:36.23:0,36,344	0/0:23,0:23:34.92:0,35,335	0/0:51,0:49:82.99:0,83,768	0/0:29,0:29:54.83:0,55,546	0/1:33,0:33:46.03:46,0,388	0/1:17,0:17:50.73:51,0,258	0/1:10,0:10:15.98:16,0,25
chr10	22411653	.	TACAC	T	1834.74	PASS	AB=0.958;AC=12;AF=0.214;AN=56;BaseQRankSum=5.625;DP=743;FS=0.000;HRun=0;HaplotypeScore=143.7814;InbreedingCoeff=0.7634;MQ=56.35;MQ0=10;MQRankSum=0.980;QD=10.14;ReadPosRankSum=5.881;VQSLOD=2.6928;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:85.44:0,85,1610	1/1:11,0:11:14.90:111,15,0	0/0:26,0:9:23.75:0,24,373	0/0:32,0:13:30.92:0,31,452	0/0:21,0:21:50.64:0,51,979	0/0:24,0:24:54.17:0,54,1123	0/0:18,0:18:38.75:0,39,724	0/0:35,0:34:76.33:0,76,1317	1/1:21,1:22:35.86:326,36,0	0/0:23,0:22:48.16:0,48,902	0/0:20,0:20:12.04:0,12,183	0/0:26,0:26:39.13:0,39,710	0/0:29,0:29:39.09:0,39,684	0/0:28,0:28:60.03:0,60,1145	0/0:31,0:31:47.90:0,48,855	0/0:25,0:25:1.90:0,2,437	1/1:20,0:20:20.35:147,20,0	0/1:25,1:25:37.99:131,0,38	1/1:32,0:31:63.55:736,64,0	1/1:27,3:30:32.99:357,33,0	0/1:38,2:39:2.84:205,0,3	0/0:21,0:21:38.29:0,38,761	0/0:24,0:24:38.08:0,38,728	0/0:47,0:45:83.96:0,84,1648	0/0:30,0:30:62.96:0,63,1190	0/0:32,0:32:65.99:0,66,1171	0/0:17,0:17:32.78:0,33,659	0/0:11,0:11:6:0,6,94
chr10	22413473	.	C	CA	3233.06	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-12.009;DP=552;FS=0.888;HRun=6;HaplotypeScore=56.9179;InbreedingCoeff=0.9958;MQ=71.26;MQ0=0;MQRankSum=-1.037;QD=27.87;ReadPosRankSum=1.510;VQSLOD=4.1777;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:57.12:0,57,582	1/1:1,11:12:33.11:415,33,0	0/0:20,0:19:36.06:0,36,362	0/0:12,0:12:26.62:0,27,245	0/0:32,0:32:87.18:0,87,881	0/0:23,0:23:57.12:0,57,582	0/0:10,0:10:24.04:0,24,237	0/0:31,0:31:78.17:0,78,791	1/1:3,9:12:27.09:340,27,0	0/0:25,0:25:66.15:0,66,673	0/0:23,0:23:63.14:0,63,643	0/0:16,0:16:36.08:0,36,366	0/0:26,0:26:66.14:0,66,673	0/0:21,0:21:54.12:0,54,551	0/0:18,0:18:51.10:0,51,514	0/0:28,0:28:75.17:0,75,765	1/1:2,16:18:39.12:491,39,0	1/1:4,14:18:36.12:453,36,0	1/1:3,16:19:48.15:604,48,0	1/1:3,28:31:75.24:943,75,0	1/1:0,6:6:15.05:189,15,0	0/0:13,0:13:36.08:0,36,367	0/0:20,0:20:45.09:0,45,459	0/0:12,0:12:36.06:0,36,359	0/0:27,0:27:78.17:0,78,796	0/0:22,0:22:60.13:0,60,612	0/0:24,0:24:66.15:0,66,673	0/0:8,0:8:24.05:0,24,245
chr10	22414619	.	CTA	C	2401.25	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=8.897;DP=311;FS=1.774;HRun=0;HaplotypeScore=49.3024;InbreedingCoeff=0.9179;MQ=74.09;MQ0=0;MQRankSum=-6.282;QD=32.02;ReadPosRankSum=1.977;VQSLOD=5.4481;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:33.05:0,33,518	1/1:0,3:3:9.03:132,9,0	0/0:12,0:12:36.09:0,36,603	0/0:3,0:3:6:0,6,79	0/0:13,0:13:36.09:0,36,611	0/0:16,0:16:45.15:0,45,843	0/0:6,0:6:18.04:0,18,305	0/0:33,0:33:99:0,99,1691	1/1:1,9:10:27.09:397,27,0	0/0:9,0:9:27.09:0,27,475	0/0:17,0:17:48.14:0,48,837	0/0:1,0:1:3.01:0,3,56	0/0:7,0:7:18.06:0,18,337	0/0:8,0:8:24.07:0,24,418	0/0:6,0:6:18.06:0,18,330	0/0:7,0:7:21.02:0,21,326	1/1:1,14:15:33.11:485,33,0	1/1:0,9:9:24.08:353,24,0	1/1:4,11:15:42.13:592,42,0	1/1:4,11:15:30.10:441,30,0	1/1:1,7:8:14.98:195,15,0	0/0:5,0:5:15.05:0,15,281	0/0:12,0:12:36.12:0,36,660	0/0:3,0:3:9.03:0,9,169	0/0:13,0:13:39.12:0,39,693	0/0:16,0:16:48.16:0,48,870	0/0:22,0:22:54.17:0,54,980	0/0:16,0:16:48.12:0,48,803
chr10	22414658	.	GTA	G	3755.14	PASS	AC=28;AF=0.538;AN=52;BaseQRankSum=3.708;DP=198;FS=37.310;HRun=0;HaplotypeScore=35.5560;InbreedingCoeff=0.7724;MQ=60.25;MQ0=2;MQRankSum=-0.349;QD=27.82;ReadPosRankSum=0.028;VQSLOD=1.9410;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:5:12.04:0,12,204	1/1:0,6:6:15.04:179,15,0	./.	0/0:15,0:4:0.45:0,0,1	0/0:6,0:6:12.02:0,12,177	0/0:11,0:11:33.10:0,33,529	0/0:2,0:2:6.02:0,6,102	1/1:8,28:36:84.20:1006,84,0	1/1:1,5:6:15.05:195,15,0	1/1:2,6:8:18.06:234,18,0	1/1:2,3:5:9.03:117,9,0	0/0:3,0:3:6.02:0,6,98	0/0:4,0:4:9.03:0,9,142	0/0:1,0:1:3.01:0,3,51	1/1:1,3:4:9.03:117,9,0	1/1:0,3:3:9.03:117,9,0	1/1:2,5:7:9.03:117,9,0	1/1:2,3:5:12.04:155,12,0	1/1:3,12:15:33.08:400,33,0	1/1:2,6:8:15.05:184,15,0	./.	0/0:3,0:3:0:0,0,0	0/0:2,0:2:6.02:0,6,98	0/0:2,0:2:3.01:0,3,51	0/0:5,0:5:12.02:0,12,172	1/1:2,8:10:24.08:312,24,0	1/1:3,9:12:18.06:234,18,0	1/1:0,10:10:30.10:390,30,0
chr10	22414733	.	AC	A	99.47	PASS	AB=0.833;AC=11;AF=0.423;AN=26;BaseQRankSum=-0.868;DP=72;FS=0.000;HRun=1;HaplotypeScore=29.1557;InbreedingCoeff=0.2850;MQ=57.00;MQ0=11;MQRankSum=1.678;QD=7.10;ReadPosRankSum=-2.025;VQSLOD=-0.2619;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:1,0:1:3:0,3,28	./.	0/0:11,0:3:3:0,3,46	0/0:42,0:9:11.38:0,11,152	0/0:1,0:1:3:0,3,28	0/1:1,0:1:0:0,0,0	./.	0/1:4,0:4:35.01:54,0,35	./.	1/1:1,0:1:3:28,3,0	0/1:0,1:1:0:0,0,0	0/0:2,0:2:0:0,0,0	./.	./.	./.	./.	./.	./.	./.	./.	./.	0/1:1,0:1:0:0,0,0	./.	./.	0/1:1,1:2:0:0,0,0	1/1:2,1:3:6.02:69,6,0	1/1:0,1:1:3.01:35,3,0	./.
chr10	22414798	.	GGTTTA	G	1550.48	PASS	AC=14;AF=0.259;AN=54;BaseQRankSum=4.770;DP=197;FS=8.808;HRun=0;HaplotypeScore=57.7733;InbreedingCoeff=0.7349;MQ=117.44;MQ0=3;MQRankSum=-5.496;QD=39.76;ReadPosRankSum=2.247;VQSLOD=2.1659;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:4:9.03:0,9,261	1/1:0,6:6:15.05:286,15,0	0/0:27,0:21:20.83:0,21,583	0/0:39,0:27:29.33:0,29,1067	0/0:4,0:4:12.04:0,12,349	0/0:3,0:3:9.03:0,9,261	0/0:2,0:2:6.02:0,6,144	0/0:23,0:23:51.18:0,51,1478	1/1:0,3:3:9.03:171,9,0	0/0:7,0:7:21.07:0,21,603	0/0:4,0:4:9.03:0,9,262	0/0:1,0:1:3.01:0,3,87	0/0:3,0:3:9.03:0,9,262	0/0:5,0:5:15.05:0,15,433	0/0:7,0:6:18.06:0,18,508	./.	1/1:2,8:10:18.06:343,18,0	1/1:0,2:2:3.01:57,3,0	1/1:1,12:13:36.09:636,36,0	1/1:0,3:3:9.03:171,9,0	1/1:0,2:2:3.01:57,3,0	0/0:1,0:1:3.01:0,3,87	0/0:1,0:1:3.01:0,3,87	0/0:4,0:4:12.04:0,12,348	0/0:5,0:5:15.05:0,15,436	0/0:4,0:4:12.04:0,12,349	0/0:8,0:8:21.07:0,21,607	0/0:6,0:6:18.06:0,18,523
chr10	22414910	.	T	TCACA	1419.31	PASS	AB=1.000;AC=31;AF=0.738;AN=42;BaseQRankSum=1.108;DP=275;FS=4.130;HRun=0;HaplotypeScore=68.1564;InbreedingCoeff=0.2841;MQ=65.71;MQ0=6;MQRankSum=-0.485;QD=7.97;ReadPosRankSum=-0.225;VQSLOD=1.7416;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:15:5.91:103,6,0	0/0:4,0:3:3.01:0,3,47	./.	./.	0/0:5,0:6:3:0,3,28	1/1:6,7:14:11.91:263,12,0	1/1:8,0:9:5.75:50,6,0	1/1:20,0:19:5.94:94,6,0	./.	1/1:3,0:3:4.83:43,5,0	0/1:4,0:4:0.25:0,0,0	1/1:4,0:4:3.01:42,3,0	1/1:1,2:4:6.02:141,6,0	1/1:7,3:10:5.92:141,6,0	1/1:8,0:7:2.90:49,3,0	./.	0/1:28,0:27:26.54:27,0,334	0/1:9,0:10:24.44:24,0,79	0/0:14,0:14:3.01:0,3,47	0/0:6,0:6:9.02:0,9,121	./.	./.	./.	1/1:5,0:10:2.74:12,3,0	1/1:6,0:6:9.02:119,9,0	1/1:12,0:11:8.95:79,9,0	1/1:11,0:11:6.02:122,6,0	1/1:10,0:10:6.25:236,6,0
chr10	22415143	.	G	GA	4707.34	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=1.103;DP=390;FS=2.459;HRun=8;HaplotypeScore=43.7128;InbreedingCoeff=0.9694;MQ=66.37;MQ0=2;MQRankSum=-0.656;QD=19.86;ReadPosRankSum=-1.031;VQSLOD=4.1754;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:54.03:0,54,493	1/1:0,6:6:15.04:171,15,0	0/0:6,0:6:12:0,12,109	0/0:3,0:2:6:0,6,55	0/0:15,0:15:42.01:0,42,380	0/0:11,0:11:23.99:0,24,215	0/0:11,0:11:30.02:0,30,274	1/1:7,1:26:54.20:315,54,0	1/1:0,8:8:18.05:208,18,0	1/1:4,0:23:48.45:251,48,0	1/1:1,1:14:34.34:184,34,0	0/0:12,0:12:33.01:0,33,302	0/0:19,0:19:54.03:0,54,494	0/0:15,0:15:42.02:0,42,384	1/1:3,14:17:42.12:485,42,0	1/1:1,18:19:51.15:588,51,0	1/1:0,11:11:23.85:277,24,0	1/1:1,9:10:21.06:242,21,0	1/1:3,13:16:39.12:450,39,0	1/1:0,12:12:36.11:415,36,0	1/1:1,12:13:36.11:415,36,0	0/0:7,0:7:18.01:0,18,165	0/0:9,0:9:27:0,27,242	0/0:7,0:7:18.01:0,18,165	0/0:16,0:16:45.02:0,45,412	1/1:6,1:23:48.30:262,48,0	1/1:2,2:29:68.51:387,69,0	1/1:2,0:7:11.36:58,11,0
chr10	22415246	.	AT	A	6422.05	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-5.494;DP=443;FS=0.000;HRun=10;HaplotypeScore=53.2871;InbreedingCoeff=0.9304;MQ=69.59;MQ0=0;MQRankSum=-0.703;QD=21.27;ReadPosRankSum=3.188;VQSLOD=5.5734;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:54.08:0,54,566	0/0:0,0:3:2.84:0,3,14	0/0:9,0:9:14.51:0,15,154	0/0:4,0:3:0.58:0,1,11	0/0:19,0:21:47.01:0,47,532	1/1:1,19:20:56.99:495,57,0	1/1:0,12:12:29.99:260,30,0	1/1:3,22:25:35.79:536,36,0	0/0:2,0:16:39.80:0,40,199	1/1:7,13:21:43.98:365,44,0	1/1:2,15:17:41.98:365,42,0	1/1:1,15:16:38.99:339,39,0	1/1:3,22:25:56.97:495,57,0	1/1:1,15:16:41.84:364,42,0	1/1:2,28:30:77.98:677,78,0	1/1:3,20:23:56.99:495,57,0	0/0:3,0:12:19.89:0,20,99	0/0:2,0:6:17.38:0,17,123	0/0:4,0:25:62.93:0,63,340	0/0:3,0:15:31.25:0,31,156	0/0:0,0:7:17.04:0,17,85	1/1:0,9:9:20.98:182,21,0	1/1:1,15:16:41.88:364,42,0	1/1:2,7:9:20.98:182,21,0	1/1:0,6:6:15:130,15,0	1/1:2,12:14:35.98:313,36,0	1/1:4,20:24:56.96:495,57,0	1/1:5,14:19:41.98:365,42,0
chr10	22415563	.	C	CA	1657.97	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=11.986;DP=463;FS=0.000;HRun=0;HaplotypeScore=62.1381;InbreedingCoeff=0.9059;MQ=66.13;MQ0=1;MQRankSum=-10.999;QD=22.41;ReadPosRankSum=1.502;VQSLOD=5.1895;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:30.10:0,30,419	1/1:1,5:6:18.03:176,18,0	0/0:4,0:3:6:0,6,53	0/1:9,0:9:0.84:1,0,134	0/0:21,0:21:63.20:0,63,862	0/0:25,0:25:75.25:0,75,1049	0/0:12,0:12:36.10:0,36,485	0/0:41,0:41:99:0,114,1592	1/1:2,7:9:27.01:269,27,0	0/0:23,0:23:69.23:0,69,965	0/0:22,0:22:66.22:0,66,922	0/0:22,0:22:66.22:0,66,923	0/0:26,0:26:78.25:0,78,1076	0/0:21,0:21:60.20:0,60,838	0/0:21,0:21:63.21:0,63,881	0/0:22,0:22:66.22:0,66,922	1/1:0,5:5:12.02:119,12,0	1/1:1,3:4:9.01:95,9,0	1/1:1,8:9:27.07:305,27,0	1/1:0,25:25:75.14:751,75,0	1/1:2,4:6:12.02:133,12,0	0/0:8,0:8:24.08:0,24,334	0/0:19,0:19:54.17:0,54,737	0/0:7,0:7:21.07:0,21,294	0/0:21,0:21:63.21:0,63,881	0/0:26,0:26:75.24:0,75,1033	0/0:27,0:27:81.27:0,81,1132	0/0:11,0:11:33.11:0,33,459
chr10	22415565	.	A	ATT	1828.93	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=12.339;DP=461;FS=1.068;HRun=1;HaplotypeScore=69.8303;InbreedingCoeff=0.8639;MQ=63.48;MQ0=0;MQRankSum=-11.537;QD=26.51;ReadPosRankSum=2.210;VQSLOD=2.6719;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:30.10:0,30,489	1/1:1,4:6:18.05:204,18,0	0/0:4,0:2:6:0,6,65	0/1:8,0:8:25.48:25,0,146	0/0:20,0:20:60.19:0,60,950	0/0:25,0:25:75.24:0,75,1179	0/0:12,0:12:36.11:0,36,563	0/0:41,0:41:99:0,123,1898	1/1:1,7:8:21.53:244,22,0	0/0:24,0:24:69.24:0,69,1125	0/0:23,0:23:69.22:0,69,1078	0/0:22,0:22:66.22:0,66,1066	0/0:26,0:26:78.25:0,78,1198	0/0:21,0:21:60.19:0,60,952	0/0:22,0:22:66.21:0,66,1053	0/0:23,0:22:66.23:0,66,1074	1/1:0,5:5:12.03:138,12,0	1/1:1,3:4:12:131,12,0	1/1:1,8:9:21.64:304,22,0	1/1:0,25:25:75.22:876,75,0	1/1:1,3:4:8.23:101,8,0	0/0:7,0:7:21.06:0,21,318	0/0:19,0:19:54.18:0,54,878	0/0:8,0:8:24.07:0,24,368	0/0:21,0:21:63.21:0,63,1015	0/0:25,0:25:75.23:0,75,1152	0/0:28,0:28:84.27:0,84,1338	0/0:11,0:11:30.10:0,30,489
chr10	22416017	.	ATG	A	9909.13	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=10.511;DP=595;FS=1.048;HRun=0;HaplotypeScore=79.4302;InbreedingCoeff=0.9959;MQ=61.95;MQ0=3;MQRankSum=-0.348;QD=31.76;ReadPosRankSum=0.709;VQSLOD=6.2691;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:90.31:0,90,1505	1/1:0,8:8:24.08:306,24,0	0/0:21,0:12:33.11:0,33,524	0/0:24,0:13:20.42:0,20,272	0/0:22,0:22:60.19:0,60,976	0/0:21,0:21:63.22:0,63,1054	0/0:14,0:14:39.13:0,39,649	1/1:7,32:39:96.24:1155,96,0	1/1:1,13:14:39.12:497,39,0	1/1:1,19:20:57.15:696,57,0	1/1:3,23:26:63.20:802,63,0	0/0:23,0:23:66.23:0,66,1104	0/0:26,0:27:78.24:0,78,1256	0/0:25,0:25:60.19:0,60,970	1/1:0,22:22:66.21:840,66,0	1/1:1,19:20:54.17:687,54,0	1/1:2,11:13:26.76:377,27,0	1/1:1,9:10:19.78:293,20,0	1/1:5,6:10:18.01:187,18,0	1/1:5,31:36:87.28:1108,87,0	1/1:3,19:22:42.13:535,42,0	0/0:7,0:7:21.07:0,21,351	0/0:17,0:17:51.17:0,51,840	0/0:12,0:12:36.12:0,36,602	0/0:33,0:33:78.32:0,78,1414	1/1:1,30:31:84.25:1054,84,0	1/1:2,30:32:87.28:1106,87,0	1/1:0,8:8:21.07:267,21,0
chr10	22416325	.	AGAAG	A	12817.71	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=18.562;DP=735;FS=9.193;HRun=0;HaplotypeScore=151.5324;InbreedingCoeff=0.9947;MQ=80.32;MQ0=0;MQRankSum=-9.508;QD=46.61;ReadPosRankSum=0.719;VQSLOD=4.8932;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,102,2792	0/0:10,0:10:30.10:0,30,822	0/0:25,0:25:67.99:0,68,1685	0/0:17,0:17:48.12:0,48,1229	0/0:29,0:29:87.30:0,87,2378	0/0:24,0:24:72.21:0,72,1910	0/0:16,0:16:48.16:0,48,1303	1/1:8,40:48:99:2158,120,0	0/0:24,0:24:69.22:0,69,1777	1/1:6,25:31:84.20:1443,84,0	1/1:1,30:31:90.17:1662,90,0	0/0:26,0:26:75.26:0,75,1971	0/0:31,0:31:90.31:0,90,2460	0/0:23,0:23:66.23:0,66,1785	1/1:2,32:34:99:1912,99,0	1/1:3,37:40:93.32:1798,93,0	0/0:22,0:22:66.23:0,66,1781	0/0:13,0:13:39.13:0,39,995	0/0:19,0:19:54.19:0,54,1473	0/0:37,0:37:99:0,108,2865	0/0:18,0:18:48.16:0,48,1314	0/0:17,0:17:51.18:0,51,1363	0/0:22,0:22:66.22:0,66,1717	0/0:18,0:18:54.19:0,54,1419	0/0:32,0:32:93.32:0,93,2535	1/1:6,36:42:99:2103,111,0	1/1:4,32:36:77.94:1510,78,0	1/1:2,11:13:12.04:233,12,0
chr10	22416330	.	GA	G	263.80	PASS	AB=0.969;AC=13;AF=0.232;AN=56;BaseQRankSum=20.676;DP=721;FS=2.778;HRun=1;HaplotypeScore=151.0555;InbreedingCoeff=0.6818;MQ=83.15;MQ0=0;MQRankSum=-7.061;QD=1.03;ReadPosRankSum=3.184;VQSLOD=-0.6032;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,114,1747	0/0:10,0:10:30.10:0,30,480	0/0:23,1:24:45.74:0,46,992	0/0:22,0:22:66.06:0,66,909	0/0:31,0:31:93.32:0,93,1482	0/0:25,0:25:75.24:0,75,1176	0/0:17,0:17:51.16:0,51,792	0/1:41,0:41:31.96:32,0,50	0/0:23,0:23:66.21:0,66,1030	0/1:28,2:30:22.96:40,0,23	0/1:30,1:31:7.30:38,0,7	0/0:25,0:25:75.26:0,75,1197	0/0:32,0:32:96.33:0,96,1526	0/0:21,0:21:63.21:0,63,1004	1/1:33,1:33:28.82:77,29,0	1/1:37,1:38:28.18:76,28,0	0/0:22,0:22:66.18:0,66,1022	0/0:14,0:14:38.86:0,39,553	0/0:20,0:20:60.20:0,60,948	0/0:35,0:35:99:0,105,1655	0/0:19,0:19:54.15:0,54,816	0/0:17,0:17:51.17:0,51,813	0/0:23,0:23:69.22:0,69,1071	0/0:17,0:17:51.16:0,51,791	0/0:31,0:31:93.32:0,93,1487	1/1:36,1:37:32.09:84,32,0	1/1:33,0:33:24.99:83,25,0	1/1:11,0:11:3.54:9,4,0
chr10	22418897	.	GA	G	8146.24	PASS	AB=0.647;AC=47;AF=0.870;AN=54;BaseQRankSum=5.877;DP=519;FS=13.390;HRun=9;HaplotypeScore=99.6665;InbreedingCoeff=0.6622;MQ=41.29;MQ0=13;MQRankSum=-7.010;QD=17.94;ReadPosRankSum=3.611;VQSLOD=3.9859;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:28:65.52:0,66,676	1/1:4,8:12:27.01:245,27,0	./.	0/0:11,0:2:2.99:0,3,23	0/0:23,0:23:44.77:0,45,459	1/1:5,14:20:50.06:443,50,0	1/1:10,16:22:47.95:430,48,0	1/1:4,16:19:47.80:436,48,0	1/1:7,13:20:41.91:371,42,0	1/1:9,6:14:1.19:145,1,0	1/1:2,13:14:27:247,27,0	1/1:7,16:22:45:411,45,0	1/1:9,14:23:51.02:464,51,0	1/1:5,10:14:29.96:269,30,0	1/1:5,24:29:72:652,72,0	1/1:5,15:19:36.01:329,36,0	1/1:2,18:19:51.01:466,51,0	0/1:5,6:10:8.84:168,0,9	1/1:3,9:12:27:247,27,0	1/1:4,20:24:54.01:494,54,0	1/1:1,7:8:12:110,12,0	1/1:7,19:26:47.97:434,48,0	1/1:6,11:17:29.99:274,30,0	1/1:7,8:13:0.86:144,1,0	1/1:5,20:23:44.98:410,45,0	1/1:7,15:22:41.97:383,42,0	1/1:7,19:26:45:411,45,0	1/1:1,9:8:18.01:165,18,0
chr10	22418911	.	CAA	C	4533.87	PASS	AB=0.713;AC=39;AF=0.696;AN=56;BaseQRankSum=5.867;DP=583;FS=22.224;HRun=14;HaplotypeScore=132.4018;InbreedingCoeff=0.5847;MQ=47.58;MQ0=8;MQRankSum=-8.727;QD=10.17;ReadPosRankSum=3.653;VQSLOD=1.8370;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:32:78.48:0,78,978	1/1:4,1:12:21.01:104,21,0	0/0:11,0:7:9.90:0,10,98	0/1:13,0:5:2.60:3,0,71	0/0:22,0:24:53.12:0,53,641	1/1:5,12:18:29.58:261,30,0	1/1:8,13:23:5.19:293,5,0	0/0:14,1:33:25.81:0,26,219	1/1:4,0:15:9.58:89,10,0	0/1:6,2:17:1.91:2,0,75	0/1:8,2:19:51.64:53,0,52	1/1:9,14:22:32.67:300,33,0	1/1:5,15:23:16.45:351,16,0	1/1:6,11:16:32.92:305,33,0	1/1:2,0:32:71.29:308,71,0	1/1:5,0:20:32.69:142,33,0	1/1:7,0:21:35.61:155,36,0	0/1:5,0:12:1.31:61,0,1	1/1:4,0:14:27.41:120,27,0	1/1:6,0:26:43.79:191,44,0	1/1:4,0:11:4.23:16,4,0	1/1:10,27:38:56.69:574,57,0	1/1:2,16:18:35.93:333,36,0	1/1:1,16:16:35.88:332,36,0	1/1:8,21:29:50.80:518,51,0	0/1:12,2:20:21.71:22,0,175	0/0:9,1:21:37.22:0,37,164	0/0:3,1:13:1.10:0,1,125
chr10	22420609	.	TA	T	5647.65	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=5.104;DP=349;FS=9.323;HRun=10;HaplotypeScore=73.0786;InbreedingCoeff=0.9237;MQ=60.71;MQ0=0;MQRankSum=-3.784;QD=21.64;ReadPosRankSum=0.989;VQSLOD=5.5443;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,1:24:28.09:0,28,538	1/1:0,4:4:12:104,12,0	0/0:13,1:9:14.66:0,15,150	0/0:23,1:13:26.04:0,26,262	0/0:23,0:23:60.15:0,60,657	1/1:3,9:12:23.99:208,24,0	1/1:4,7:11:26.95:227,27,0	1/1:3,7:10:23.99:208,24,0	1/1:1,4:6:11.02:84,11,0	1/1:0,20:21:62.03:527,62,0	1/1:5,10:15:29.59:256,30,0	1/1:1,12:14:32.98:286,33,0	1/1:3,8:11:26.99:234,27,0	1/1:3,12:15:32.90:286,33,0	1/1:1,9:10:29.99:260,30,0	1/1:3,3:6:8.99:78,9,0	1/1:1,7:8:20.99:182,21,0	1/1:0,6:6:18:156,18,0	1/1:1,12:13:38.99:338,39,0	1/1:2,8:10:26.99:234,27,0	1/1:0,2:2:6:52,6,0	1/1:1,7:8:17.99:156,18,0	1/1:2,7:9:20.98:182,21,0	1/1:2,11:12:29.98:260,30,0	1/1:1,11:12:32.99:284,33,0	1/1:2,12:14:35.99:313,36,0	1/1:4,10:14:32.99:286,33,0	1/1:0,17:17:50.99:443,51,0
chr10	22420629	.	TAA	T	1640.07	PASS	AB=0.738;AC=13;AF=0.241;AN=54;BaseQRankSum=-4.008;DP=406;FS=0.612;HRun=11;HaplotypeScore=111.0926;InbreedingCoeff=0.7209;MQ=63.72;MQ0=10;MQRankSum=-4.425;QD=12.42;ReadPosRankSum=-2.178;VQSLOD=1.8401;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:24:54.18:0,54,827	0/0:0,0:4:9.98:0,10,34	0/0:30,0:13:27.56:0,28,323	0/1:35,0:13:2.22:2,0,70	0/0:26,0:26:72.24:0,72,1080	0/0:12,0:12:29.83:0,30,237	0/0:12,0:12:31.91:0,32,248	1/1:5,18:21:53.91:566,54,0	0/0:3,0:9:21:0,21,88	1/1:12,12:24:48.66:513,49,0	1/1:3,9:13:29.98:368,30,0	0/0:14,0:14:32.84:0,33,261	0/0:10,0:9:14.39:0,14,102	0/0:15,0:15:35.62:0,36,284	1/1:1,7:8:21.05:222,21,0	1/1:0,4:4:12.03:128,12,0	0/0:4,0:10:20.19:0,20,79	0/0:3,0:5:9.86:0,10,34	0/1:6,1:12:10.18:10,0,58	0/1:3,1:11:4.41:4,0,61	./.	0/0:12,0:12:22.52:0,23,174	0/0:11,0:11:32.39:0,32,247	0/0:13,0:13:23.23:0,23,162	0/0:15,0:15:40.50:0,40,305	0/0:15,1:16:9.65:0,10,482	0/0:17,0:18:50.66:0,51,747	0/0:13,0:14:35.61:0,36,516
chr10	22420635	.	A	AAC	4445.09	PASS	AB=1.000;AC=19;AF=0.352;AN=54;BaseQRankSum=-7.754;DP=429;FS=5.665;HRun=0;HaplotypeScore=108.8907;InbreedingCoeff=0.9278;MQ=59.77;MQ0=14;MQRankSum=-2.649;QD=27.44;ReadPosRankSum=1.891;VQSLOD=6.3731;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:26:60.15:0,60,838	0/0:4,0:4:11.97:0,12,96	0/0:32,0:12:28.15:0,28,340	0/1:41,0:13:5.11:5,0,76	0/0:25,0:25:75.24:0,75,1073	1/1:2,12:13:30.02:470,30,0	1/1:2,10:12:36.11:580,36,0	0/0:25,0:23:65.58:0,66,481	0/0:8,0:8:23.93:0,24,194	0/0:23,0:22:59.61:0,60,460	0/0:16,0:16:41.51:0,42,298	1/1:2,10:13:33.09:530,33,0	1/1:6,7:12:17.95:242,18,0	1/1:2,13:15:35.90:571,36,0	0/0:8,0:8:23.80:0,24,171	0/0:8,0:8:20.86:0,21,152	0/0:10,0:10:29.66:0,30,217	0/0:6,0:6:17.87:0,18,134	0/0:13,0:11:26.94:0,27,219	0/0:12,0:12:32.73:0,33,247	./.	1/1:4,6:10:24.06:391,24,0	1/1:2,11:13:36:546,36,0	1/1:4,10:14:29.62:433,30,0	1/1:3,14:17:42.12:678,42,0	0/0:16,0:15:39.76:0,40,502	0/0:18,0:18:51.16:0,51,727	0/0:14,0:14:36.10:0,36,508
chr10	22420654	.	C	CAA	2795.08	PASS	AB=0.981;AC=17;AF=0.304;AN=56;BaseQRankSum=0.046;DP=447;FS=3.974;HRun=11;HaplotypeScore=117.9221;InbreedingCoeff=0.7061;MQ=57.54;MQ0=15;MQRankSum=-4.584;QD=11.94;ReadPosRankSum=-0.241;VQSLOD=1.9945;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:10,15:26:35.03:535,35,0	0/0:0,0:4:10.98:0,11,48	0/1:31,0:15:7.99:8,0,96	0/1:38,0:13:19.75:20,0,78	0/0:23,0:23:56.97:0,57,534	0/1:16,1:16:7.41:7,0,282	0/0:12,0:13:11.83:0,12,215	1/1:23,13:35:62.54:763,63,0	0/0:1,0:6:13.65:0,14,58	1/1:15,7:21:38.84:464,39,0	1/1:5,8:16:43.39:499,43,0	0/0:15,0:15:29.44:0,29,270	0/0:18,0:17:39.06:0,39,377	0/0:12,0:13:26.74:0,27,244	0/0:9,0:9:18:0,18,174	0/0:12,0:12:33:0,33,309	0/0:3,0:7:10.96:0,11,48	0/0:1,0:3:8.23:0,8,36	0/0:3,0:15:27.12:0,27,109	0/0:3,0:14:27.70:0,28,112	0/0:2,0:2:2.68:0,3,11	0/0:12,0:12:33.04:0,33,320	0/0:10,0:12:11.51:0,12,148	0/0:16,0:16:29.78:0,30,283	0/0:18,0:17:38.98:0,39,368	1/1:14,0:15:23.16:200,23,0	1/1:19,0:19:44.90:369,45,0	1/1:11,0:11:14.98:126,15,0
chr10	22420656	.	A	AAAAC	2277.44	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=-0.373;DP=454;FS=1.304;HRun=0;HaplotypeScore=142.1394;InbreedingCoeff=0.4313;MQ=57.28;MQ0=15;MQRankSum=-4.784;QD=15.08;ReadPosRankSum=-1.301;VQSLOD=2.9880;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:24:8.19:8,0,74	0/0:4,0:4:12.03:0,12,124	0/0:28,0:13:21.78:0,22,236	0/1:38,0:13:10.74:11,0,157	0/0:22,0:22:63.16:0,63,1070	0/0:17,0:16:36.97:0,37,616	0/0:14,0:14:32.94:0,33,485	0/0:39,0:37:24.19:0,24,230	0/1:7,0:7:12.32:12,0,136	0/0:22,0:21:16.18:0,16,178	0/0:16,0:16:18.80:0,19,83	0/0:16,0:16:42.05:0,42,621	0/0:18,0:17:39.13:0,39,684	0/0:13,0:13:29.85:0,30,501	0/0:9,0:9:24:0,24,364	0/0:13,0:13:33.04:0,33,550	0/0:6,1:7:13.25:0,13,134	0/0:4,0:4:2.07:0,2,31	0/1:16,0:15:89.84:174,0,90	0/1:14,0:14:99:122,0,158	1/1:2,0:2:2.74:12,3,0	0/0:13,0:13:36.11:0,36,610	0/0:12,0:12:29.83:0,30,374	0/0:16,0:16:33.14:0,33,546	0/0:20,0:19:45.07:0,45,735	1/1:13,5:17:18.11:618,18,0	1/1:4,14:19:50.37:1059,50,0	1/1:7,5:12:23.90:427,24,0
chr10	22420688	.	C	CAAAAA	7995.53	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=3.122;DP=445;FS=1.626;HRun=6;HaplotypeScore=117.3938;InbreedingCoeff=0.9404;MQ=85.18;MQ0=0;MQRankSum=-10.922;QD=38.63;ReadPosRankSum=0.437;VQSLOD=1.5884;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:36.10:0,36,655	1/1:4,3:7:6.02:179,6,0	0/0:29,0:26:10.88:0,11,907	0/0:18,0:17:36.03:0,36,519	0/0:17,0:17:45.12:0,45,777	0/0:16,0:16:36.10:0,36,622	0/0:12,0:12:30.07:0,30,512	1/1:23,0:23:24.08:559,24,0	1/1:3,6:10:18.06:538,18,0	1/1:14,0:14:18.06:423,18,0	1/1:19,0:20:24.06:475,24,0	0/0:19,0:19:48.15:0,48,871	0/0:24,0:24:57.20:0,57,1029	0/0:19,0:19:47.51:0,48,866	1/1:6,0:18:20.19:503,20,0	1/1:6,0:21:24.08:577,24,0	1/1:4,8:17:12.04:358,12,0	1/1:2,2:5:6.49:180,6,0	1/1:1,10:13:33.07:749,33,0	1/1:1,13:16:39.13:1098,39,0	1/1:4,3:7:12.04:308,12,0	0/0:14,0:14:39.13:0,39,707	0/0:16,0:16:39.59:0,40,709	0/0:22,0:22:50.96:0,51,894	0/0:14,0:14:30.09:0,30,545	1/1:4,10:14:30.09:830,30,0	1/1:1,14:16:36.12:1037,36,0	1/1:4,2:6:6.02:179,6,0
chr10	22420691	.	A	AAAAAAAAAC	11439.73	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=8.126;DP=454;FS=3.239;HRun=0;HaplotypeScore=163.6265;InbreedingCoeff=0.9757;MQ=86.52;MQ0=0;MQRankSum=-13.149;QD=53.71;ReadPosRankSum=-2.816;VQSLOD=3.9907;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:39.10:0,39,1043	1/1:6,0:6:15:211,15,0	0/0:27,0:27:19.84:0,20,1459	0/0:20,0:18:41.88:0,42,828	0/0:18,0:18:48.14:0,48,1224	0/0:16,0:16:36.12:0,36,954	0/0:13,0:13:33.08:0,33,833	1/1:13,11:26:61.97:2221,62,0	1/1:9,0:9:24.08:352,24,0	1/1:8,7:17:42.14:1564,42,0	1/1:10,9:19:48.13:1756,48,0	0/0:18,0:18:48.15:0,48,1329	0/0:25,0:25:60.19:0,60,1624	0/0:19,0:19:51.14:0,51,1345	1/1:19,0:19:39.13:1107,39,0	1/1:21,0:21:42.62:1283,43,0	1/1:17,0:17:21.06:311,21,0	1/1:5,0:5:6.02:79,6,0	1/1:14,0:14:30.92:378,31,0	1/1:16,0:16:42.09:573,42,0	1/1:7,0:7:21.06:271,21,0	0/0:14,0:14:39.13:0,39,1073	0/0:16,0:16:39.12:0,39,1091	0/0:22,0:22:54.12:0,54,1412	0/0:14,0:14:30.09:0,30,847	1/1:14,0:14:15.64:619,16,0	1/1:18,0:18:17.41:498,17,0	1/1:5,0:5:15.05:217,15,0
chr10	22421198	.	GAA	G	1398.83	PASS	AB=0.512;AC=5;AF=0.089;AN=56;BaseQRankSum=0.765;DP=636;FS=5.862;HRun=3;HaplotypeScore=101.7377;InbreedingCoeff=0.8071;MQ=68.30;MQ0=6;MQRankSum=2.397;QD=29.76;ReadPosRankSum=-3.213;VQSLOD=2.1601;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:75.95:0,76,985	0/0:13,0:13:39.09:0,39,700	0/0:14,0:7:9.07:0,9,299	0/0:23,0:19:28.51:0,29,539	0/0:13,0:13:26.85:0,27,303	0/0:25,0:25:72.83:0,73,1111	0/0:36,0:36:93.12:0,93,1613	0/1:1,20:21:0.68:769,0,1	0/0:18,0:18:51.09:0,51,849	1/1:12,2:14:38.33:518,38,0	1/1:6,4:10:5.28:232,5,0	0/0:30,0:30:90.04:0,90,1525	0/0:30,0:29:81.13:0,81,1356	0/0:25,0:24:67.05:0,67,1115	0/0:33,0:31:87.77:0,88,964	0/0:33,0:33:86.62:0,87,1005	0/0:33,0:33:91.18:0,91,1584	0/0:15,0:15:39.13:0,39,650	0/0:23,0:23:68.88:0,69,1113	0/0:25,0:24:69.11:0,69,1079	0/0:21,0:20:54.06:0,54,826	0/0:29,0:29:84.28:0,84,1475	0/0:12,0:12:36.08:0,36,623	0/0:34,0:33:96.12:0,96,1651	0/0:21,0:21:63.08:0,63,1033	0/0:22,0:22:65.97:0,66,848	0/0:22,0:22:64.41:0,64,920	0/0:4,0:4:12:0,12,153
chr10	22421200	.	AGT	A	1725.86	PASS	AB=0.913;AC=24;AF=0.462;AN=52;BaseQRankSum=8.315;DP=676;FS=0.941;HRun=0;HaplotypeScore=107.3049;InbreedingCoeff=-0.0402;MQ=66.06;MQ0=8;MQRankSum=4.544;QD=3.62;ReadPosRankSum=0.862;VQSLOD=2.6066;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:36:3.33:62,0,3	0/0:13,0:13:21.07:0,21,316	./.	./.	1/1:6,7:13:9.50:100,9,0	0/1:22,4:26:99:103,0,213	0/0:30,7:37:5.36:0,5,438	0/0:26,0:26:15.09:0,15,80	0/1:19,1:20:14.44:14,0,383	0/0:26,0:25:43.78:0,44,337	0/0:14,0:13:6.07:0,6,37	0/1:28,2:31:23.31:23,0,631	0/1:27,3:30:23.27:23,0,606	0/1:23,1:23:0.08:0,0,379	1/1:14,16:31:56.65:572,57,0	1/1:12,18:33:25.74:448,26,0	0/1:31,2:34:18.51:19,0,505	0/0:15,0:15:18.04:0,18,226	0/1:23,0:23:35.20:35,0,78	0/1:23,1:23:6.09:6,0,314	0/1:24,2:24:47.75:48,0,178	0/0:30,0:31:45.14:0,45,654	0/1:15,0:15:2.95:3,0,312	0/1:33,2:34:12.16:12,0,640	0/1:17,3:21:71.52:72,0,409	1/1:6,0:24:39.30:190,39,0	0/1:18,0:23:22.13:120,0,22	1/1:5,0:5:4.46:41,4,0
chr10	22421307	.	G	GATGA	8520.87	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-3.249;DP=730;FS=11.340;HRun=0;HaplotypeScore=133.3874;InbreedingCoeff=0.9025;MQ=70.96;MQ0=5;MQRankSum=0.309;QD=39.09;ReadPosRankSum=0.063;VQSLOD=4.8456;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:57.17:0,57,877	1/1:5,8:13:24.08:572,24,0	0/0:21,0:16:3.01:0,3,47	0/0:23,0:19:6.01:0,6,75	0/0:36,0:36:57.19:0,57,897	0/0:21,0:21:42.14:0,42,665	0/0:24,0:24:39.11:0,39,584	0/0:15,0:22:0.74:0,1,44	1/1:11,0:24:21.07:365,21,0	0/0:13,0:38:75.08:0,75,697	0/0:10,0:21:15.02:0,15,140	0/0:35,0:35:75.24:0,75,1154	0/0:34,0:34:69.23:0,69,1070	0/0:27,0:27:60.19:0,60,909	0/0:6,0:33:66.08:0,66,615	0/0:5,0:31:59.86:0,60,544	1/1:9,15:25:45.15:1072,45,0	1/1:2,6:9:12.04:286,12,0	1/1:10,0:15:19.24:253,19,0	1/1:5,28:33:78.27:1793,78,0	1/1:3,7:10:12.04:252,12,0	0/0:26,0:26:57.19:0,57,888	0/0:20,0:20:33.11:0,33,522	0/0:36,0:36:72.24:0,72,1127	0/0:36,0:36:96.30:0,96,1476	1/1:6,19:28:72.24:1583,72,0	1/1:21,31:54:89.94:2130,90,0	1/1:2,3:5:9.03:215,9,0
chr10	22424046	.	TC	T	1514.98	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=1.384;DP=676;FS=2.596;HRun=5;HaplotypeScore=120.1486;InbreedingCoeff=0.9965;MQ=78.72;MQ0=0;MQRankSum=-1.878;QD=25.68;ReadPosRankSum=0.863;VQSLOD=2.1833;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:84.27:0,84,1131	0/0:10,0:10:30.10:0,30,409	0/0:19,0:19:50.83:0,51,633	0/0:20,0:20:45.04:0,45,546	0/0:37,0:37:99:0,108,1437	0/0:24,0:24:69.13:0,69,901	0/0:20,0:20:54.10:0,54,671	0/0:41,0:41:99:0,123,1666	0/0:17,0:17:48.16:0,48,656	0/0:38,0:38:99:0,105,1380	0/0:27,0:27:75.24:0,75,1009	0/0:41,0:41:99:0,114,1522	0/0:34,0:34:99:0,102,1353	0/0:36,0:36:99:0,108,1440	0/0:28,0:28:81.24:0,81,1074	0/0:30,0:30:87.25:0,87,1138	0/0:17,0:17:48.16:0,48,654	0/0:10,0:10:27.05:0,27,347	0/0:12,0:12:33.11:0,33,451	0/0:20,0:20:57.19:0,57,779	0/0:18,0:18:51.14:0,51,664	0/0:21,0:21:54.18:0,54,738	0/0:22,0:22:66.20:0,66,885	0/0:20,0:19:60.20:0,60,820	0/0:25,0:25:63.21:0,63,861	1/1:3,24:27:72.19:807,72,0	1/1:2,24:26:57.16:646,57,0	1/1:0,6:6:18.05:204,18,0
chr10	22424204	.	AAGATAGAT	A	485.49	PASS	AB=1.000;AC=14;AF=0.350;AN=40;BaseQRankSum=3.938;DP=645;FS=5.032;HRun=0;HaplotypeScore=207.5020;InbreedingCoeff=0.5766;MQ=66.29;MQ0=14;MQRankSum=0.728;QD=2.16;ReadPosRankSum=-1.056;VQSLOD=2.4401;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:35:29.22:0,29,402	0/0:16,0:16:21.07:0,21,326	./.	./.	1/1:21,10:31:18.06:222,18,0	./.	0/1:18,0:17:0:0,0,0	0/0:36,0:34:1.82:0,2,5	0/0:21,0:21:27.06:0,27,401	1/1:36,0:36:21.04:313,21,0	0/1:33,0:33:0.01:0,0,0	./.	0/1:30,0:29:0:0,0,0	./.	0/0:28,0:28:24.08:0,24,410	0/0:31,0:31:44.66:0,45,678	0/0:16,0:17:30.08:0,30,434	1/1:5,0:5:1.25:3,1,0	0/0:13,0:13:9.02:0,9,136	0/0:22,0:22:15.02:0,15,179	0/0:4,0:5:6.02:0,6,101	./.	./.	0/0:21,0:20:3.01:0,3,35	./.	1/1:24,0:24:0.46:44,0,0	0/1:35,0:33:1.95:20,0,2	1/1:13,0:11:0.47:1,0,0
chr10	22424249	.	AGATAGATAGATAGATGGATGGATGGATGGATGGATGGATGGATG	A	2759.20	PASS	AB=1.000;AC=15;AF=0.326;AN=46;BaseQRankSum=6.871;DP=464;FS=2.126;HRun=0;HaplotypeScore=384.2509;InbreedingCoeff=0.3737;MQ=39.41;MQ0=103;MQRankSum=-4.608;QD=13.53;ReadPosRankSum=0.332;VQSLOD=1.3487;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:27:42.50:0,43,1817	0/0:10,0:10:24.06:0,24,878	./.	./.	0/0:30,0:16:0.06:0,0,250	./.	0/1:11,0:8:0:0,0,0	1/1:30,0:27:33.94:744,34,0	0/0:15,0:12:30.09:0,30,891	1/1:7,23:25:46:1372,46,0	1/1:2,24:26:2.97:20,3,0	0/1:10,0:8:0:0,0,0	0/1:15,0:10:0:0,0,0	0/0:14,0:9:1.82:0,2,5	0/0:21,0:16:30.10:0,30,1459	0/0:30,0:25:68.38:0,68,2619	0/0:20,0:16:31.66:0,32,878	0/0:3,0:2:2.92:0,3,17	0/1:7,0:7:7.92:8,0,287	0/0:18,0:18:21.03:0,21,446	0/0:11,0:4:5.69:0,6,229	./.	0/1:12,0:8:0:0,0,0	0/0:13,0:10:3.01:0,3,154	./.	0/1:29,0:25:82.47:436,0,82	0/1:19,0:15:68.47:231,0,68	1/1:15,0:2:3.01:80,3,0
chr10	22424261	.	AGATGGATGGATGGATGGATGGATGGATGGATG	A	1970.22	PASS	AB=1.000;AC=19;AF=0.594;AN=32;BaseQRankSum=3.148;DP=343;FS=3.964;HRun=0;HaplotypeScore=253.2619;InbreedingCoeff=0.6960;MQ=37.68;MQ0=101;MQRankSum=-0.667;QD=12.24;ReadPosRankSum=1.537;VQSLOD=2.2443;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:21:41.61:0,42,761	1/1:9,0:9:5.99:50,6,0	./.	./.	0/0:27,0:13:6.49:0,6,96	./.	./.	1/1:21,0:18:38.89:540,39,0	1/1:13,0:10:8.92:99,9,0	1/1:29,0:24:33.93:715,34,0	./.	./.	./.	./.	0/0:19,0:14:18.05:0,18,453	0/0:28,0:23:44.42:0,44,766	1/1:15,0:12:11.91:167,12,0	./.	1/1:6,0:6:2.90:20,3,0	0/0:2,12:14:2.97:0,3,20	0/1:10,0:3:0:0,0,0	./.	./.	0/0:6,0:3:3.01:0,3,53	./.	1/1:30,0:27:30.53:379,31,0	1/1:14,0:10:8.98:96,9,0	1/1:14,0:2:3.01:39,3,0
chr10	22424265	.	GGATGGATGGATGGATGGATGGATGGATGGATGGATGGATGGATA	G	2595.45	PASS	AB=1.000;AC=11;AF=0.324;AN=34;BaseQRankSum=7.345;DP=336;FS=8.458;HRun=0;HaplotypeScore=342.0187;InbreedingCoeff=0.2719;MQ=37.13;MQ0=100;MQRankSum=-1.134;QD=17.08;ReadPosRankSum=2.872;VQSLOD=1.0666;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:21:40.35:0,40,1413	0/0:9,0:9:18.03:0,18,204	./.	./.	0/0:29,0:15:18.95:0,19,647	./.	./.	0/1:18,0:16:33.24:33,0,134	0/0:11,0:8:10.45:0,10,108	0/1:29,0:24:19.46:572,0,19	0/1:24,0:24:0:0,0,0	./.	./.	./.	0/0:17,0:12:21.06:0,21,760	0/0:27,0:22:57.65:0,58,1842	0/1:13,0:10:14.37:14,0,130	./.	0/1:8,0:8:99:109,0,105	0/0:13,0:13:8.98:0,9,82	0/0:10,0:3:2.68:0,3,52	./.	./.	0/0:5,0:2:3.01:0,3,88	./.	1/1:5,23:25:56.15:1445,56,0	1/1:16,0:12:17.98:470,18,0	1/1:16,0:4:3.01:78,3,0
chr10	22425131	.	C	CA	2027.14	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-11.592;DP=698;FS=1.742;HRun=3;HaplotypeScore=63.0255;InbreedingCoeff=0.9952;MQ=81.50;MQ0=0;MQRankSum=-1.421;QD=34.95;ReadPosRankSum=2.145;VQSLOD=4.3557;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:42.13:0,42,504	0/0:6,0:6:18.06:0,18,216	0/0:19,0:19:53.97:0,54,562	0/0:18,0:19:36.73:0,37,418	0/0:28,0:28:78.24:0,78,936	0/0:29,0:29:78.24:0,78,936	0/0:24,0:24:72.22:0,72,864	0/0:28,0:28:84.24:0,84,992	0/0:25,0:25:72.19:0,72,840	0/0:33,0:33:90.26:0,90,1062	0/0:21,0:21:60.17:0,60,709	0/0:28,0:28:81.21:0,81,957	0/0:35,0:35:99:0,99,1174	0/0:38,0:38:99:0,114,1368	1/1:3,29:32:84.28:1176,84,0	1/1:1,25:26:39.25:972,39,0	0/0:21,0:21:60.17:0,60,708	0/0:10,0:10:27.08:0,27,324	0/0:19,0:19:54.13:0,54,617	0/0:31,0:31:87.26:0,87,1034	0/0:27,0:27:81.25:0,81,972	0/0:28,0:28:78.23:0,78,925	0/0:29,0:29:81.24:0,81,960	0/0:18,0:18:48.15:0,48,576	0/0:20,0:20:60.17:0,60,709	0/0:38,0:38:99:0,108,1273	0/0:34,0:33:99:0,102,1198	0/0:16,0:16:45.14:0,45,540
chr10	22425619	.	TCCATCCATCTAG	T	4651.62	PASS	AB=0.936;AC=12;AF=0.214;AN=56;BaseQRankSum=11.397;DP=704;FS=7.159;HRun=0;HaplotypeScore=294.4441;InbreedingCoeff=0.4719;MQ=70.39;MQ0=2;MQRankSum=-6.980;QD=23.73;ReadPosRankSum=2.338;VQSLOD=2.8631;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:72.25:0,72,2833	0/0:5,0:5:15.05:0,15,874	0/0:46,0:29:46.23:0,46,2047	0/0:40,0:28:45.50:0,45,1068	0/0:30,0:30:90.31:0,90,3793	1/1:22,0:22:44.45:713,44,0	0/1:14,0:15:23.94:234,0,24	0/0:46,0:46:99:0,138,4273	0/0:14,0:14:42.13:0,42,1988	0/0:28,0:28:84.29:0,84,4295	0/0:20,0:20:60.19:0,60,2686	0/1:23,0:23:0.82:617,0,1	0/1:34,0:34:33.15:691,0,33	1/1:15,0:15:8.58:297,9,0	0/0:33,0:33:93.31:0,93,3627	0/0:30,0:30:90.30:0,90,3618	0/0:16,0:16:48.15:0,48,1699	0/0:18,0:18:51.17:0,51,2222	0/0:15,0:15:39.13:0,39,1919	0/0:23,0:23:69.24:0,69,3032	0/0:19,0:19:57.17:0,57,2438	0/1:24,0:24:0.92:519,0,1	0/1:13,12:25:13.88:742,0,14	0/1:9,0:9:17.62:18,0,21	1/1:29,0:29:28.28:821,28,0	0/0:36,0:36:84.18:0,84,2388	0/0:55,0:53:99:0,110,2168	0/0:4,0:4:12.04:0,12,400
chr10	22425623	.	TCCATCTAG	T	6356.48	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=6.481;DP=720;FS=3.447;HRun=0;HaplotypeScore=244.7676;InbreedingCoeff=0.9123;MQ=68.24;MQ0=6;MQRankSum=-5.640;QD=27.28;ReadPosRankSum=0.361;VQSLOD=4.4308;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:75.15:0,75,2040	0/0:6,0:6:18.06:0,18,716	0/0:50,0:28:38.84:0,39,1340	0/0:47,0:29:31.06:0,31,759	0/0:31,0:31:93.31:0,93,2947	1/1:21,5:26:66.14:942,66,0	1/1:14,0:14:32.66:484,33,0	0/0:49,0:49:99:0,147,3556	0/0:14,0:14:42.14:0,42,1550	0/0:28,0:28:84.28:0,84,3184	0/0:21,0:21:63.19:0,63,2072	1/1:18,4:22:56.61:839,57,0	1/1:25,7:32:84.45:1126,84,0	1/1:16,1:17:41.85:627,42,0	0/0:32,0:32:96.28:0,96,2807	0/0:30,0:30:90.25:0,90,2756	0/0:16,0:16:48.12:0,48,1258	0/0:18,0:18:54.18:0,54,1825	0/0:13,0:13:39.13:0,39,1456	0/0:24,0:24:72.25:0,72,2312	0/0:17,0:17:51.17:0,51,1832	1/1:0,23:23:21.05:402,21,0	1/1:13,11:24:30.10:575,30,0	1/1:8,0:8:18:195,18,0	1/1:21,8:29:78.18:1128,78,0	0/1:38,0:38:38.60:39,0,872	0/0:55,0:53:54.35:0,54,913	0/0:4,0:4:11.91:0,12,210
chr10	22425647	.	TCTAG	T	3611.51	PASS	AB=1.000;AC=20;AF=0.357;AN=56;BaseQRankSum=9.775;DP=770;FS=2.475;HRun=0;HaplotypeScore=209.1216;InbreedingCoeff=0.7861;MQ=65.18;MQ0=37;MQRankSum=0.811;QD=13.09;ReadPosRankSum=-1.208;VQSLOD=2.7129;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:23:26.99:0,27,756	0/0:10,0:10:30.06:0,30,588	0/0:67,0:20:3.33:0,3,161	0/0:67,0:24:22.36:0,22,217	0/0:30,0:30:87.03:0,87,1292	1/1:21,5:25:51.34:409,51,0	1/1:13,0:13:21.74:175,22,0	0/0:35,0:35:99:0,99,1092	0/0:16,0:16:45.09:0,45,840	0/0:35,0:34:99:0,99,1771	0/0:25,0:25:63.06:0,63,1118	1/1:15,4:19:42.71:364,43,0	1/1:17,6:23:41.77:439,42,0	1/1:20,1:21:34.32:317,34,0	0/0:27,0:27:78.10:0,78,1329	0/0:29,0:29:84.09:0,84,1235	0/0:15,0:15:42.46:0,42,704	0/0:18,0:18:54.02:0,54,970	0/0:26,0:21:59.60:0,60,883	0/0:25,0:25:66.09:0,66,1149	0/0:25,0:24:69.09:0,69,1245	1/1:14,7:21:18.39:235,18,0	1/1:14,11:25:33.45:318,33,0	1/1:5,0:5:5.99:50,6,0	1/1:20,8:27:50.63:410,51,0	0/1:42,0:42:99:499,0,176	0/1:53,0:51:95.98:395,0,96	0/0:19,0:4:5.49:0,5,57
chr10	22426302	.	GACAATCATATGGAACTGAGTTACAGGTTATAGTTGATTGTGAACCACTACAT	G	4446.84	PASS	AC=16;AF=0.296;AN=54;BaseQRankSum=5.777;DP=606;FS=0.000;HRun=0;HaplotypeScore=713.6593;InbreedingCoeff=0.8099;MQ=87.09;MQ0=0;MQRankSum=-4.636;QD=37.06;ReadPosRankSum=3.034;VQSLOD=-0.5932;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,102,15422	0/0:11,0:11:33.11:0,33,5398	0/0:21,0:21:51.17:0,51,3069	0/0:28,0:28:78.19:0,78,4204	0/0:28,0:28:84.29:0,84,10778	1/1:8,4:12:9.03:1177,9,0	1/1:6,0:6:3.01:49,3,0	0/0:28,0:28:84.27:0,84,6394	0/0:27,0:27:78.27:0,78,10893	0/0:34,0:34:96.32:0,96,15801	0/0:28,0:28:78.27:0,78,11203	1/1:15,5:20:3.01:392,3,0	1/1:11,10:21:8.62:1176,9,0	1/1:20,5:25:3.01:392,3,0	0/0:31,0:31:93.32:0,93,14302	0/0:27,0:27:81.28:0,81,12446	0/0:18,0:18:54.19:0,54,7178	0/0:9,0:9:27.09:0,27,3646	0/0:14,0:14:42.14:0,42,5237	0/0:32,0:32:90.31:0,90,12824	0/0:40,0:40:99:0,111,16631	1/1:13,2:15:3.01:392,3,0	1/1:12,0:12:6.02:84,6,0	./.	1/1:7,2:9:6.02:785,6,0	0/0:32,0:32:96.33:0,96,14844	0/0:26,0:26:78.27:0,78,11786	0/0:7,0:7:21.07:0,21,3529
chr10	22431199	.	C	CT	4191.73	PASS	AB=0.614;AC=22;AF=0.393;AN=56;BaseQRankSum=-0.435;DP=621;FS=9.129;HRun=10;HaplotypeScore=75.1077;InbreedingCoeff=0.8539;MQ=75.96;MQ0=1;MQRankSum=-3.206;QD=16.18;ReadPosRankSum=-1.687;VQSLOD=3.0543;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:23:61.95:0,62,498	1/1:1,0:9:22.92:120,23,0	0/0:24,0:21:33.82:0,34,277	0/0:25,0:20:31.36:0,31,294	0/0:21,0:22:55.97:0,56,449	0/0:28,0:29:67.93:0,68,547	0/0:34,1:35:60.79:0,61,694	0/1:11,20:32:26.12:529,0,26	1/1:4,0:18:18.46:108,18,0	1/1:3,16:19:51.13:541,51,0	1/1:2,25:27:66.13:691,66,0	0/0:26,0:26:61.16:0,61,514	0/0:26,1:29:15.29:0,15,428	0/0:22,0:24:45.95:0,46,354	1/1:8,17:25:23.48:455,23,0	1/1:5,22:28:69.47:712,69,0	1/1:3,1:33:65.61:346,66,0	1/1:2,0:13:23.97:117,24,0	1/1:6,0:15:23.68:117,24,0	1/1:3,2:30:63.35:373,63,0	0/1:4,1:10:7.11:83,0,7	0/0:23,0:23:35.82:0,36,441	0/0:17,0:17:35.94:0,36,296	0/0:18,0:18:40.51:0,41,324	0/0:15,0:15:29.93:0,30,246	0/0:19,1:21:11.99:0,12,294	0/0:18,0:18:41.95:0,42,345	0/0:12,0:12:29.96:0,30,246
chr10	22433822	.	TAGGGCATCATA	T	10334.77	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=14.213;DP=491;FS=7.560;HRun=0;HaplotypeScore=161.4551;InbreedingCoeff=0.9879;MQ=84.81;MQ0=0;MQRankSum=-13.964;QD=73.30;ReadPosRankSum=5.377;VQSLOD=3.7995;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:45.15:0,45,2422	0/0:11,0:11:33.11:0,33,1901	0/0:20,0:20:57.20:0,57,2294	0/0:16,0:16:40.69:0,41,1673	0/0:25,0:25:66.23:0,66,3501	1/1:6,27:33:75.26:2631,75,0	1/1:1,12:13:30.10:1017,30,0	0/0:36,0:36:99:0,108,5360	0/0:20,0:20:60.21:0,60,3452	0/0:14,0:14:39.13:0,39,1938	0/0:12,0:12:36.12:0,36,2037	1/1:2,15:17:42.14:1487,42,0	1/1:3,16:19:42.14:1498,42,0	1/1:0,15:15:36.12:1284,36,0	0/0:29,0:29:84.28:0,84,4623	0/0:22,0:22:63.22:0,63,3483	0/0:13,0:13:39.12:0,39,2102	0/0:8,0:8:24.08:0,24,1305	0/0:14,0:14:42.14:0,42,2184	0/0:25,0:25:66.23:0,66,3232	0/0:13,0:13:39.13:0,39,2234	1/1:0,5:5:12.04:428,12,0	1/1:1,10:11:18.06:642,18,0	1/1:1,11:12:11.78:385,12,0	1/1:1,14:16:27.09:963,27,0	0/0:17,0:17:48.16:0,48,2684	0/0:30,0:30:87.17:0,87,4990	0/0:9,0:9:27.09:0,27,1558
chr10	22434175	.	T	TTC	5066.79	PASS	AB=0.933;AC=36;AF=0.643;AN=56;BaseQRankSum=-1.257;DP=498;FS=3.293;HRun=0;HaplotypeScore=170.3750;InbreedingCoeff=0.5746;MQ=64.55;MQ0=6;MQRankSum=-4.763;QD=16.19;ReadPosRankSum=0.699;VQSLOD=5.0199;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:62.85:0,63,736	0/0:10,0:11:14.44:0,14,57	0/0:40,0:26:42:0,42,481	0/0:44,0:23:38.58:0,39,352	0/0:27,0:27:63.18:0,63,762	1/1:21,0:21:34.48:502,34,0	1/1:13,6:19:20.89:344,21,0	1/1:14,7:21:45.11:581,45,0	0/0:9,0:9:6.58:0,7,28	1/1:19,0:19:41.98:463,42,0	1/1:19,1:20:11.57:480,12,0	1/1:10,0:10:14.93:162,15,0	1/1:19,0:19:35.42:353,35,0	1/1:8,0:8:17.96:187,18,0	1/1:18,0:18:35.98:402,36,0	1/1:10,0:10:18.04:233,18,0	0/1:13,0:13:37.04:37,0,37	0/0:2,0:3:1.19:0,1,9	0/1:10,1:12:8.18:114,0,8	0/1:22,0:23:29.01:29,0,64	1/1:8,0:10:3.06:8,3,0	1/1:13,0:13:17.59:164,18,0	1/1:12,1:13:27.04:310,27,0	1/1:12,0:12:9.03:119,9,0	1/1:24,0:24:42.04:484,42,0	0/1:20,0:22:51.68:71,0,52	0/0:24,0:24:9.75:0,10,87	1/1:6,0:6:2.99:23,3,0
chr10	22434192	.	TCTCTC	T	6377.64	PASS	AB=1.000;AC=44;AF=0.786;AN=56;BaseQRankSum=10.331;DP=510;FS=39.111;HRun=0;HaplotypeScore=189.5585;InbreedingCoeff=0.6230;MQ=61.73;MQ0=12;MQRankSum=-7.975;QD=20.91;ReadPosRankSum=3.431;VQSLOD=2.5922;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:63.90:0,64,1851	1/1:12,0:12:22.52:321,23,0	0/0:65,0:28:47.45:0,47,1054	0/0:79,0:34:53.57:0,54,1146	0/0:26,0:26:75.26:0,75,2227	1/1:15,3:18:18.01:200,18,0	1/1:15,0:15:9:118,9,0	1/1:14,4:18:35.59:565,36,0	0/1:7,0:7:7.88:133,0,8	1/1:14,3:17:10.79:442,11,0	1/1:15,4:19:20.83:327,21,0	1/1:5,1:6:5.14:66,5,0	1/1:12,5:17:34.64:475,35,0	1/1:6,4:10:12.03:174,12,0	1/1:14,1:15:12.95:195,13,0	1/1:8,2:10:11.02:138,11,0	1/1:12,0:12:10.56:317,11,0	0/1:3,0:3:11.15:44,0,11	1/1:7,0:7:2.26:153,2,0	1/1:28,0:28:8.43:576,8,0	0/0:7,0:7:8.15:0,8,46	1/1:8,1:9:12.24:125,12,0	1/1:11,3:14:18.04:237,18,0	1/1:9,1:10:2.85:39,3,0	1/1:15,1:16:22.94:261,23,0	1/1:20,0:20:40.38:731,40,0	1/1:20,0:20:51.16:705,51,0	1/1:2,0:2:3.01:35,3,0
chr10	22434196	.	TCCTCG	T	7679.35	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=7.586;DP=495;FS=42.181;HRun=0;HaplotypeScore=178.7781;InbreedingCoeff=0.7674;MQ=65.09;MQ0=13;MQRankSum=-7.442;QD=26.48;ReadPosRankSum=1.445;VQSLOD=2.9619;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:24:40.30:0,40,1824	1/1:0,8:12:24.07:471,24,0	0/0:68,0:25:39.94:0,40,887	0/0:83,0:35:69.28:0,69,1135	0/0:26,0:26:78.27:0,78,2303	1/1:13,0:13:18.34:165,18,0	1/1:14,0:14:8.96:70,9,0	1/1:14,0:14:36.57:467,37,0	1/1:1,5:6:9.03:199,9,0	1/1:15,0:15:30.09:469,30,0	1/1:16,0:16:28.81:415,29,0	1/1:6,0:6:5.93:47,6,0	1/1:17,0:17:34.49:333,34,0	1/1:10,0:10:11.95:110,12,0	1/1:13,0:13:15.49:268,15,0	1/1:8,0:8:12.01:154,12,0	1/1:1,9:12:27.94:507,28,0	1/1:1,0:3:6.02:96,6,0	1/1:2,4:7:14.54:261,15,0	1/1:3,19:28:59.92:1000,60,0	1/1:1,2:6:2.68:11,3,0	1/1:9,0:9:12.35:86,12,0	1/1:14,0:14:17.92:177,18,0	1/1:9,0:9:2.96:20,3,0	1/1:16,0:16:20.07:155,20,0	1/1:1,13:20:57.19:1117,57,0	1/1:1,15:20:54.13:1030,54,0	1/1:2,0:2:3.01:53,3,0
chr10	22434201	.	GCT	G	976.81	PASS	AB=0.820;AC=27;AF=0.500;AN=54;BaseQRankSum=5.549;DP=500;FS=0.000;HRun=0;HaplotypeScore=183.8061;InbreedingCoeff=0.3281;MQ=66.08;MQ0=15;MQRankSum=-3.396;QD=4.10;ReadPosRankSum=2.165;VQSLOD=2.9126;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:57.14:0,57,860	0/1:10,0:12:6.79:13,0,7	0/0:72,0:23:23.40:0,23,248	0/0:95,0:39:0.15:0,0,246	0/0:25,0:25:66.18:0,66,1007	0/1:7,4:11:38.81:44,0,39	0/1:11,3:14:2.74:3,0,16	1/1:7,6:13:18:175,18,0	1/1:5,0:5:2.49:6,2,0	1/1:3,8:11:21.04:218,21,0	1/1:1,14:15:30.06:310,30,0	0/0:3,2:5:2.96:0,3,19	0/1:17,2:19:2.82:3,0,88	0/0:11,1:12:10.50:0,10,52	1/1:3,9:12:14.93:142,15,0	1/1:1,4:5:8.63:61,9,0	1/1:11,0:11:7.11:22,7,0	0/0:3,0:3:3.86:0,4,23	0/0:5,0:5:4.54:0,5,27	1/1:24,1:27:13.72:46,14,0	0/0:7,0:8:0:0,0,0	0/1:8,3:11:19.37:19,0,29	0/1:9,5:14:11.55:12,0,36	0/0:9,0:9:2.68:0,3,12	0/1:16,2:18:13.76:14,0,56	1/1:18,0:20:9.81:32,10,0	1/1:16,0:20:7.07:29,7,0	./.
chr10	22434219	.	GCT	G	2858.60	PASS	AB=1.000;AC=22;AF=0.407;AN=54;BaseQRankSum=2.798;DP=527;FS=7.577;HRun=0;HaplotypeScore=188.4541;InbreedingCoeff=0.7549;MQ=68.70;MQ0=13;MQRankSum=-3.148;QD=11.39;ReadPosRankSum=0.621;VQSLOD=2.3535;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:54:0,54,773	1/1:2,8:11:26.80:269,27,0	0/0:57,0:20:5.50:0,5,122	0/1:91,0:36:5.10:5,0,219	0/0:24,0:24:66.21:0,66,1032	0/0:16,0:16:29.98:0,30,341	0/0:17,0:17:15.02:0,15,179	0/0:21,0:21:11.66:0,12,451	1/1:7,2:9:18.01:205,18,0	0/0:16,0:16:12.65:0,13,272	0/1:22,0:22:14.74:15,0,142	0/0:5,0:5:3.01:0,3,36	0/0:14,0:14:31.83:0,32,415	0/0:14,0:14:27.03:0,27,325	1/1:7,9:16:18:199,18,0	1/1:1,6:8:11.93:106,12,0	1/1:5,6:11:21.03:235,21,0	1/1:3,0:3:5.87:36,6,0	1/1:9,2:11:21.01:222,21,0	1/1:17,16:33:69.07:772,69,0	0/0:5,3:8:0:0,0,0	0/0:16,0:16:18.07:0,18,225	0/0:13,0:13:15.92:0,16,208	0/0:11,0:11:9:0,9,96	0/0:21,0:21:52.33:0,52,584	1/1:4,14:18:48.10:553,48,0	1/1:4,13:17:39.10:444,39,0	./.
chr10	22434274	.	C	CA	919.58	PASS	AB=1.000;AC=6;AF=0.107;AN=56;BaseQRankSum=5.471;DP=447;FS=0.000;HRun=7;HaplotypeScore=95.5047;InbreedingCoeff=0.6002;MQ=59.46;MQ0=0;MQRankSum=-5.265;QD=14.15;ReadPosRankSum=-0.867;VQSLOD=3.2005;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:51.06:0,51,492	0/0:4,0:4:9.01:0,9,86	0/1:16,0:14:7.08:7,0,203	0/1:18,0:14:9.37:9,0,124	0/0:25,0:25:66.10:0,66,637	0/0:13,0:13:36.06:0,36,348	0/0:17,0:17:42.06:0,42,404	0/0:28,0:28:69.09:0,69,661	0/0:10,0:10:30.05:0,30,290	0/0:20,0:20:57.08:0,57,547	0/0:24,0:24:63.08:0,63,601	0/0:7,0:7:18.03:0,18,174	0/0:12,0:12:30.04:0,30,290	0/0:20,0:20:54.09:0,54,520	1/1:2,12:14:42.11:494,42,0	1/1:0,16:16:45.14:540,45,0	0/0:18,0:18:48.07:0,48,463	0/0:9,0:9:27.04:0,27,260	0/0:16,0:16:35.26:0,35,325	0/0:27,0:27:78.12:0,78,752	0/0:12,0:12:30.05:0,30,289	0/0:17,0:17:51.08:0,51,492	0/0:16,0:16:45.07:0,45,434	0/0:8,0:8:21.03:0,21,203	0/0:26,0:26:78.12:0,78,752	0/0:13,0:13:36.06:0,36,347	0/0:17,0:17:45.07:0,45,434	0/0:2,0:2:3:0,3,29
chr10	22434292	.	CA	C	2361.65	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=3.674;DP=468;FS=9.178;HRun=8;HaplotypeScore=95.1879;InbreedingCoeff=0.9507;MQ=65.38;MQ0=0;MQRankSum=-1.402;QD=22.93;ReadPosRankSum=-1.257;VQSLOD=3.0705;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:58.38:0,58,670	0/0:5,0:5:12.04:0,12,142	0/0:16,0:14:37.63:0,38,409	0/0:20,0:18:23.11:0,23,317	0/0:30,0:30:87.27:0,87,1050	0/0:13,0:13:33.10:0,33,399	0/0:14,0:14:30.09:0,30,358	1/1:2,28:30:84.11:799,84,0	0/0:14,0:14:42.13:0,42,503	1/1:2,18:20:54.08:521,54,0	1/1:4,17:21:51.08:492,51,0	0/0:10,0:10:27.08:0,27,320	0/0:13,0:13:33.10:0,33,396	0/0:18,0:18:48.10:0,48,560	1/1:2,13:15:36.05:347,36,0	1/1:2,15:17:39.06:376,39,0	0/0:18,0:18:54.16:0,54,642	0/0:9,0:9:24.07:0,24,287	0/0:19,0:19:54.16:0,54,648	0/0:29,0:29:78.24:0,78,938	0/0:11,0:11:24.07:0,24,290	0/0:19,0:19:51.11:0,51,600	0/0:17,0:17:42.13:0,42,501	0/0:8,0:8:21.06:0,21,253	0/0:27,0:27:72.15:0,72,828	0/0:12,0:12:33.06:0,33,382	0/0:20,0:20:60.11:0,60,685	0/0:2,0:2:3.01:0,3,36
chr10	22434370	.	ACAAGGAGCC	A	21023.76	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=9.682;DP=351;FS=8.852;HRun=0;HaplotypeScore=143.6298;InbreedingCoeff=0.9232;MQ=64.29;MQ0=0;MQRankSum=-11.259;QD=73.77;ReadPosRankSum=1.284;VQSLOD=4.7795;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:36.08:0,36,1516	1/1:1,9:10:24.08:744,24,0	0/0:12,0:12:33.11:0,33,1394	0/0:10,0:10:30.10:0,30,1258	0/0:31,0:31:87.29:0,87,4085	1/1:0,8:8:21.07:646,21,0	1/1:2,7:9:21.07:651,21,0	1/1:5,22:27:66.19:1815,66,0	1/1:0,11:11:33.11:1017,33,0	1/1:4,14:18:48.16:1466,48,0	1/1:5,8:13:27.09:778,27,0	1/1:2,6:8:15.05:462,15,0	1/1:1,9:10:27.09:837,27,0	1/1:0,10:11:33.11:1014,33,0	1/1:3,7:10:27.07:697,27,0	1/1:3,4:7:12.04:372,12,0	1/1:5,6:11:12.04:316,12,0	1/1:2,7:9:21.07:580,21,0	1/1:1,12:13:33.11:1024,33,0	1/1:3,19:22:54.18:1598,54,0	1/1:0,4:4:9.03:262,9,0	1/1:1,11:12:33.11:1018,33,0	1/1:0,16:16:45.15:1360,45,0	1/1:2,3:5:6.02:186,6,0	1/1:3,17:20:54.19:1674,54,0	1/1:0,14:14:42.14:1303,42,0	1/1:2,10:12:27.09:834,27,0	1/1:0,5:5:12.04:372,12,0
chr10	22434401	.	A	AT	511.13	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=0.093;DP=410;FS=3.547;HRun=5;HaplotypeScore=158.2720;InbreedingCoeff=0.8868;MQ=68.17;MQ0=0;MQRankSum=-3.559;QD=24.34;ReadPosRankSum=0.360;VQSLOD=1.7006;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:57.14:0,57,613	0/0:8,0:8:24.06:0,24,258	0/0:12,0:12:9.41:0,9,217	0/0:7,0:7:17.05:0,17,150	0/0:30,0:30:81.20:0,81,868	0/0:13,0:13:36.09:0,36,385	0/0:10,0:10:27.07:0,27,290	0/0:27,0:27:63.11:0,63,664	0/0:12,0:12:36.09:0,36,385	0/0:20,0:20:54.13:0,54,580	0/0:19,0:19:54.13:0,54,574	0/0:8,0:8:18.04:0,18,192	0/0:13,0:13:36.07:0,36,376	0/0:21,0:21:57.14:0,57,612	1/1:1,10:11:27.09:355,27,0	1/1:3,7:10:21.07:276,21,0	0/0:10,0:10:18.04:0,18,193	0/0:11,0:11:27.07:0,27,290	0/0:19,0:19:48.59:0,49,516	0/0:24,0:24:69.17:0,69,740	0/0:5,0:5:12.03:0,12,127	0/0:15,0:15:38.96:0,39,416	0/0:20,0:20:48.12:0,48,513	0/0:5,0:5:6.01:0,6,64	0/0:23,0:22:60.14:0,60,642	0/0:21,0:21:60.15:0,60,644	0/0:10,0:10:27.07:0,27,289	0/0:6,0:6:15.04:0,15,161
chr10	22434688	.	GGTTTT	G	4012.99	PASS	AB=0.991;AC=16;AF=0.286;AN=56;BaseQRankSum=-4.283;DP=733;FS=8.614;HRun=0;HaplotypeScore=182.5171;InbreedingCoeff=0.4546;MQ=73.46;MQ0=4;MQRankSum=-1.337;QD=14.28;ReadPosRankSum=-1.423;VQSLOD=1.9706;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:87.19:0,87,2082	0/0:18,0:18:14.12:0,14,729	0/0:33,0:27:51.91:0,52,712	0/0:45,0:33:74.97:0,75,1050	0/0:42,0:42:99:0,99,2305	0/0:34,0:34:84.21:0,84,1962	0/0:21,0:21:39.12:0,39,949	1/1:9,22:30:62.73:770,63,0	0/1:23,0:23:70.95:71,0,710	1/1:8,15:23:38.80:650,39,0	1/1:4,13:17:32.17:365,32,0	0/0:20,0:20:54.14:0,54,1295	0/0:21,0:21:54.17:0,54,1365	0/0:25,0:25:63.15:0,63,1439	1/1:6,38:44:59.56:1162,60,0	1/1:7,22:29:32.47:639,32,0	0/1:27,0:27:19.28:19,0,890	0/1:10,0:10:55.35:55,0,226	0/1:16,0:15:99:132,0,310	0/0:21,0:21:4.20:0,4,729	0/1:25,0:25:56.79:57,0,834	0/0:24,0:24:50.91:0,51,1158	0/0:19,0:19:42.05:0,42,1046	0/0:29,0:29:72.19:0,72,1664	0/0:22,0:22:54.10:0,54,1434	0/1:34,2:36:93.13:93,0,1485	0/0:30,0:30:72.64:0,73,1607	0/0:15,0:15:44.81:0,45,819
chr10	22434900	.	G	GTGGTGTTCTAT	11267.51	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-0.618;DP=655;FS=0.912;HRun=0;HaplotypeScore=200.9253;InbreedingCoeff=0.9995;MQ=82.09;MQ0=0;MQRankSum=-11.599;QD=131.02;ReadPosRankSum=-4.107;VQSLOD=4.3873;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:66.23:0,66,2376	0/0:11,0:11:33.11:0,33,1136	0/0:28,0:28:81.23:0,81,2588	0/0:27,0:27:81.28:0,81,2632	0/0:20,0:20:60.21:0,60,2172	0/0:32,0:32:96.33:0,96,3469	0/0:22,0:22:60.15:0,60,1933	1/1:31,6:41:99:5199,118,0	0/0:18,0:18:51.13:0,51,1744	1/1:10,12:25:69.24:3198,69,0	1/1:1,16:20:54.14:2871,54,0	0/0:22,0:22:66.23:0,66,2310	0/0:26,0:26:78.25:0,78,2619	0/0:27,0:27:81.26:0,81,2795	0/0:31,0:31:93.32:0,93,3314	0/0:32,0:32:96.33:0,96,3213	0/0:22,0:22:66.20:0,66,2209	0/0:17,0:17:48.12:0,48,1458	0/0:16,0:16:48.16:0,48,1650	0/0:25,0:25:72.25:0,72,2489	0/0:19,0:19:57.20:0,57,2056	0/0:29,0:29:84.29:0,84,2978	0/0:22,0:22:66.23:0,66,2384	0/0:26,0:26:78.27:0,78,2718	0/0:25,0:25:69.24:0,69,2503	0/0:15,1:16:42.14:0,42,1409	0/0:24,0:23:69.22:0,69,2354	0/0:9,0:9:27.09:0,27,979
chr10	22436380	.	CT	C	2737.72	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=4.530;DP=253;FS=13.348;HRun=4;HaplotypeScore=44.2043;InbreedingCoeff=0.8271;MQ=75.93;MQ0=1;MQRankSum=-1.154;QD=23.81;ReadPosRankSum=-0.748;VQSLOD=1.6361;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:36.10:0,36,474	1/1:1,0:1:2.97:20,3,0	0/0:12,0:10:23.97:0,24,309	0/0:5,0:5:15.04:0,15,195	0/0:15,0:15:42.14:0,42,588	0/0:3,0:3:9.03:0,9,124	0/0:6,0:6:15.05:0,15,210	1/1:1,26:27:78.22:917,78,0	1/1:8,2:10:8.99:93,9,0	1/1:9,5:14:35.90:360,36,0	1/1:5,6:11:26.97:279,27,0	0/0:7,0:7:21.07:0,21,294	0/0:3,0:3:9.01:0,9,106	0/0:14,0:14:36.06:0,36,425	0/0:9,0:9:21.07:0,21,289	0/0:10,0:10:27.09:0,27,370	1/1:1,9:10:27:304,27,0	1/1:1,9:10:27.08:322,27,0	1/1:9,3:12:33.04:382,33,0	1/1:0,9:9:23.93:226,24,0	1/1:2,2:4:3.01:36,3,0	0/0:6,0:6:18.06:0,18,252	0/0:5,0:5:15.05:0,15,207	0/0:4,0:4:12.04:0,12,165	0/0:6,0:6:15.05:0,15,201	0/1:7,0:7:3.51:4,0,188	0/0:19,0:19:35.15:0,35,670	0/0:2,0:2:3.01:0,3,42
chr10	22436383	.	T	TAATGA	3534.49	PASS	AB=0.990;AC=32;AF=0.571;AN=56;BaseQRankSum=9.765;DP=250;FS=15.381;HRun=0;HaplotypeScore=64.4573;InbreedingCoeff=0.1540;MQ=74.76;MQ0=1;MQRankSum=-3.834;QD=17.85;ReadPosRankSum=-0.068;VQSLOD=1.5500;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:36.10:0,36,738	1/1:0,0:1:3.01:80,3,0	0/0:10,0:8:20.22:0,20,286	0/0:5,0:5:15.05:0,15,256	0/0:14,0:14:42.14:0,42,855	0/1:3,0:3:7.98:8,0,115	0/1:6,0:6:22.54:23,0,281	1/1:27,0:27:73.52:600,74,0	1/1:2,4:9:8.59:126,9,0	1/1:6,6:13:35.33:632,35,0	1/1:7,3:13:29.91:371,30,0	0/1:7,0:7:0.83:1,0,344	0/1:3,0:3:8.38:8,0,80	0/1:13,0:13:23.13:23,0,330	0/1:9,0:9:52.94:53,0,311	0/1:10,0:10:82.96:83,0,338	1/1:10,0:10:26.20:185,26,0	1/1:10,0:11:28.73:242,29,0	1/1:4,1:13:37.52:518,38,0	1/1:9,0:9:22.39:145,22,0	1/1:3,0:3:6.02:106,6,0	0/0:6,0:6:18.06:0,18,343	0/1:5,0:5:3.81:4,0,213	0/0:4,0:4:12.04:0,12,189	0/1:6,0:6:50.82:132,0,51	0/1:6,1:7:99:135,0,210	0/1:18,0:18:23.68:24,0,704	0/1:2,0:2:35.52:36,0,56
chr10	22436388	.	G	GATAATAATAATA	4071.43	PASS	AB=0.935;AC=44;AF=0.880;AN=50;BaseQRankSum=0.374;DP=231;FS=1.055;HRun=0;HaplotypeScore=94.0574;InbreedingCoeff=0.3092;MQ=68.31;MQ0=1;MQRankSum=-2.456;QD=20.88;ReadPosRankSum=-0.848;VQSLOD=2.3282;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:11:12.17:0,12,420	1/1:1,0:1:3.01:80,3,0	1/1:8,0:6:5.01:27,5,0	0/1:6,0:6:0.82:1,0,29	0/0:13,0:14:24.07:0,24,721	1/1:3,1:5:3.01:176,3,0	1/1:6,0:6:3.01:175,3,0	0/1:23,0:27:13.81:122,0,14	1/1:3,0:3:2.99:24,3,0	1/1:11,0:11:17.99:205,18,0	1/1:13,0:13:17.98:207,18,0	1/1:7,0:7:3.01:92,3,0	1/1:1,1:2:3.01:175,3,0	1/1:5,4:9:9.03:526,9,0	1/1:5,0:11:6.02:73,6,0	1/1:6,0:10:9.03:110,9,0	1/1:12,0:12:9.02:203,9,0	1/1:11,0:11:9:130,9,0	1/1:8,0:9:15.05:404,15,0	./.	1/1:4,0:4:3.01:54,3,0	./.	1/1:4,0:5:3.01:156,3,0	./.	1/1:1,0:8:12.04:146,12,0	1/1:5,0:6:9.01:257,9,0	1/1:13,0:18:12.04:627,12,0	1/1:2,0:2:3.01:100,3,0
chr10	22438002	.	G	GA	5049.08	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=3.617;DP=573;FS=1.176;HRun=7;HaplotypeScore=62.1201;InbreedingCoeff=0.9933;MQ=68.49;MQ0=0;MQRankSum=-0.744;QD=29.88;ReadPosRankSum=1.111;VQSLOD=5.2550;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:59.96:0,60,564	0/0:18,0:18:51.07:0,51,487	0/0:18,0:15:32.59:0,33,285	0/0:14,0:13:20.52:0,21,225	0/0:34,0:34:93.13:0,93,892	1/1:0,24:24:63.19:761,63,0	1/1:2,9:11:18.06:217,18,0	0/0:34,0:34:87.13:0,87,838	0/0:7,0:7:21.03:0,21,203	0/0:34,0:34:99:0,99,945	0/0:23,0:23:63.05:0,63,598	1/1:0,16:16:42.13:507,42,0	1/1:1,18:19:54.17:652,54,0	1/1:1,16:17:42.13:504,42,0	0/0:26,0:26:72.11:0,72,695	0/0:14,0:14:36.05:0,36,348	0/0:26,0:26:66.10:0,66,637	0/0:7,0:7:18.03:0,18,174	0/0:15,0:15:39.06:0,39,376	0/0:24,0:24:63.10:0,63,608	0/0:6,0:6:15.02:0,15,145	1/1:0,16:16:39.12:471,39,0	1/1:1,21:22:57.17:684,57,0	1/1:2,14:16:33.06:382,33,0	1/1:2,26:28:72.22:870,72,0	0/0:27,0:27:78.09:0,78,738	0/0:32,1:33:56.90:0,57,832	0/0:21,1:22:26.85:0,27,541
chr10	22439467	.	G	GGAA	12256.22	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=12.534;DP=745;FS=5.172;HRun=0;HaplotypeScore=120.8641;InbreedingCoeff=0.9998;MQ=69.41;MQ0=0;MQRankSum=-3.841;QD=49.22;ReadPosRankSum=3.655;VQSLOD=6.7422;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,129,1997	0/0:10,0:10:30.10:0,30,473	0/0:28,0:28:60.15:0,60,852	0/0:30,0:28:43.05:0,43,846	0/0:23,0:23:60.20:0,60,951	1/1:0,23:25:66.23:1415,66,0	1/1:7,27:34:63.43:1614,63,0	0/0:35,0:35:96.33:0,96,1518	0/0:18,0:18:54.18:0,54,856	0/0:35,0:35:99:0,102,1599	0/0:20,0:20:45.15:0,45,712	1/1:7,19:26:63:1172,63,0	1/1:8,31:40:99:2099,99,0	1/1:5,23:29:66.23:1442,66,0	0/0:30,0:30:84.26:0,84,1307	0/0:26,0:26:78.25:0,78,1207	0/0:20,0:20:57.17:0,57,878	0/0:13,0:13:36.11:0,36,548	0/0:20,0:20:48.15:0,48,738	0/0:31,0:31:90.31:0,90,1427	0/0:35,0:35:93.30:0,93,1455	1/1:1,27:29:72.14:1480,72,0	1/1:1,15:16:36.08:741,36,0	1/1:6,24:30:54.04:1095,54,0	1/1:2,18:20:57.15:1199,57,0	0/0:27,0:27:72.23:0,72,1119	0/0:37,0:37:99:0,99,1521	0/0:11,0:11:33.11:0,33,523
chr10	22442455	.	A	AGG	1175.80	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-0.785;DP=722;FS=2.947;HRun=9;HaplotypeScore=94.2914;InbreedingCoeff=0.9702;MQ=85.19;MQ0=0;MQRankSum=-2.627;QD=20.27;ReadPosRankSum=-0.692;VQSLOD=2.6132;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,120,1234	0/0:8,0:8:15:0,15,159	0/0:32,0:33:74.46:0,74,723	0/0:23,0:23:41.94:0,42,405	0/0:36,0:36:96.17:0,96,1001	0/0:21,0:21:60.14:0,60,631	0/0:20,0:20:45.05:0,45,470	0/0:26,0:26:32.97:0,33,345	0/0:25,0:25:57.11:0,57,606	0/0:25,0:26:51.05:0,51,598	0/0:21,0:21:57.06:0,57,591	0/0:29,0:29:75.17:0,75,798	0/0:28,0:28:63.12:0,63,670	0/0:35,0:35:52.56:0,53,744	0/0:36,0:37:89.92:0,90,938	0/0:47,0:48:99:0,132,1362	0/0:23,0:24:59.86:0,60,618	0/0:16,0:16:39.06:0,39,406	0/0:15,0:15:36.09:0,36,383	0/0:25,0:26:62.86:0,63,643	0/0:27,0:27:41.12:0,41,607	0/0:13,0:14:26.78:0,27,267	0/0:16,0:17:44.78:0,45,440	0/0:33,0:34:86.94:0,87,906	0/0:25,0:25:61.03:0,61,640	1/1:9,7:20:8.66:388,9,0	1/1:6,15:26:43.58:556,44,0	1/1:3,9:12:24.08:369,24,0
chr10	22442761	.	A	AT	724	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-5.711;DP=609;FS=2.575;HRun=8;HaplotypeScore=60.7537;InbreedingCoeff=0.9775;MQ=78.57;MQ0=0;MQRankSum=-2.759;QD=25.86;ReadPosRankSum=-0.970;VQSLOD=4.1158;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:57.03:0,57,522	0/0:9,0:9:21.01:0,21,192	0/0:13,0:13:32.23:0,32,282	0/0:15,0:15:16.69:0,17,229	1/1:2,26:28:72.19:819,72,0	0/0:25,0:25:66.03:0,66,604	0/0:9,0:9:24.01:0,24,220	0/0:26,0:26:69.03:0,69,631	0/0:23,0:23:54:0,54,489	0/0:31,0:31:84.04:0,84,768	0/0:21,0:21:54.02:0,54,494	0/0:26,0:26:72.04:0,72,659	0/0:25,1:26:22.39:0,22,459	0/0:22,0:22:54.01:0,54,494	0/0:30,0:30:75.02:0,75,686	0/0:34,0:34:96.05:0,96,879	0/0:18,0:18:45.02:0,45,412	0/0:12,0:12:33.02:0,33,302	0/0:18,0:18:42.01:0,42,384	0/0:24,0:24:69.03:0,69,631	0/0:13,0:13:33.01:0,33,302	0/0:22,0:22:57.03:0,57,521	0/0:23,0:23:54:0,54,490	0/0:21,0:21:57.03:0,57,522	0/0:32,0:32:78.03:0,78,714	0/0:22,0:22:57:0,57,517	0/0:33,0:33:90.03:0,90,819	0/0:11,0:11:24.01:0,24,219
chr10	22442823	.	A	AT	5538.41	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-12.066;DP=596;FS=5.025;HRun=1;HaplotypeScore=57.0739;InbreedingCoeff=0.9790;MQ=85.72;MQ0=0;MQRankSum=-1.914;QD=40.13;ReadPosRankSum=0.248;VQSLOD=5.3014;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:66.15:0,66,810	1/1:0,12:12:30.02:421,30,0	0/0:24,0:24:67.04:0,67,725	0/0:16,0:16:17.62:0,18,379	0/0:31,0:31:90.25:0,90,1136	0/0:25,0:25:75.20:0,75,929	0/0:13,0:13:39.13:0,39,506	0/0:22,0:22:63.19:0,63,795	1/1:0,28:28:75.25:1123,75,0	0/0:25,0:25:75.19:0,75,953	0/0:17,0:17:51.14:0,51,634	0/0:20,0:20:57.16:0,57,713	0/0:34,0:34:99:0,99,1262	0/0:24,0:24:72.21:0,72,907	0/0:29,0:29:84.23:0,84,1037	0/0:14,0:14:39.09:0,39,464	1/1:1,15:16:6.34:590,6,0	1/1:0,19:19:54.18:808,54,0	1/1:0,25:24:75.19:1095,75,0	1/1:0,28:28:78.21:1140,78,0	1/1:0,10:10:24.08:360,24,0	0/0:20,0:20:57.17:0,57,725	0/0:21,0:21:63.20:0,63,817	0/0:15,0:15:45.15:0,45,584	0/0:23,0:23:69.21:0,69,869	0/0:26,0:26:78.25:0,78,1001	0/0:27,0:27:81.23:0,81,1013	0/0:8,0:7:21.07:0,21,272
chr10	22443086	.	TTCCC	T	9023.18	PASS	AB=1.000;AC=49;AF=0.907;AN=54;BaseQRankSum=1.204;DP=478;FS=0.885;HRun=0;HaplotypeScore=93.9198;InbreedingCoeff=0.7092;MQ=50.78;MQ0=29;MQRankSum=0.057;QD=20.32;ReadPosRankSum=0.935;VQSLOD=4.6087;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:27:71.85:615,72,0	0/1:6,0:6:5.03:82,0,5	./.	0/0:8,0:7:4.83:0,5,78	0/0:22,0:21:10.03:0,10,286	1/1:20,1:21:59.77:496,60,0	1/1:26,0:22:43.95:356,44,0	1/1:16,0:9:14.99:132,15,0	1/1:22,0:21:56.89:539,57,0	1/1:18,1:17:42.02:429,42,0	1/1:10,0:9:23.97:207,24,0	1/1:19,1:19:53.80:478,54,0	1/1:12,5:16:45:452,45,0	1/1:17,0:17:47.54:386,48,0	1/1:16,1:17:48:482,48,0	1/1:11,1:12:35.88:306,36,0	1/1:24,0:23:53.81:436,54,0	1/1:11,1:11:29.88:255,30,0	1/1:9,0:7:18.50:195,18,0	1/1:19,0:19:38.90:339,39,0	1/1:35,0:30:77.25:596,77,0	1/1:18,0:17:44.96:388,45,0	1/1:13,0:13:29.83:250,30,0	1/1:12,1:12:29.81:215,30,0	1/1:15,3:18:47.97:466,48,0	1/1:33,0:31:59.67:680,60,0	1/1:8,0:7:15.81:124,16,0	1/1:10,0:6:14.94:120,15,0
chr10	22443131	.	TCCTTCCTTCCTCCTTC	T	560.18	PASS	AB=1.000;AC=8;AF=0.143;AN=56;BaseQRankSum=5.692;DP=444;FS=4.841;HRun=0;HaplotypeScore=166.6905;InbreedingCoeff=0.0277;MQ=44.17;MQ0=46;MQRankSum=-3.067;QD=5.19;ReadPosRankSum=-2.568;VQSLOD=1.8266;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:14:17.62:0,18,330	0/0:4,0:4:8.48:0,8,160	0/0:9,0:1:3.01:0,3,46	0/0:22,0:2:4.26:0,4,49	1/1:2,13:15:24.08:481,24,0	0/0:12,0:12:1.95:0,2,546	0/0:35,0:30:56.92:0,57,1023	0/0:28,0:23:40.07:0,40,488	0/1:18,0:18:60.37:60,0,232	0/1:16,0:14:21.53:22,0,546	0/0:12,0:13:12.04:0,12,235	0/1:11,0:10:3.65:4,0,499	0/1:19,0:18:39.43:39,0,686	0/0:14,0:12:5.05:0,5,210	0/1:12,0:12:72.03:72,0,283	0/0:14,0:13:11.94:0,12,357	0/0:15,0:13:14.10:0,14,192	0/0:11,0:9:14.47:0,14,246	0/1:14,0:9:15.51:16,0,173	0/0:11,0:11:21.52:0,22,380	0/0:25,0:21:28.74:0,29,727	0/0:15,0:11:21.07:0,21,450	0/0:10,0:8:5.05:0,5,239	0/0:15,0:13:12.79:0,13,393	0/0:20,0:18:13.35:0,13,699	0/0:26,0:22:58.08:0,58,1390	0/0:10,0:9:14.36:0,14,212	0/0:7,0:3:3.01:0,3,46
chr10	22443166	.	T	TCCTTC	2623.54	PASS	AB=0.923;AC=19;AF=0.352;AN=54;BaseQRankSum=1.323;DP=498;FS=1.096;HRun=0;HaplotypeScore=109.0542;InbreedingCoeff=0.5603;MQ=43.32;MQ0=36;MQRankSum=-4.151;QD=17.49;ReadPosRankSum=-0.978;VQSLOD=3.2918;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:13:17.62:0,18,339	1/1:4,0:4:12.04:147,12,0	0/0:38,0:6:18.06:0,18,334	0/0:61,0:15:24.35:0,24,400	0/0:16,0:16:36.18:0,36,634	0/0:17,0:15:29.57:0,30,455	0/0:33,0:31:42.59:0,43,702	1/1:19,0:19:39.63:312,40,0	1/1:8,9:19:27.07:534,27,0	0/1:14,0:13:56.89:64,0,57	1/1:6,0:6:7.43:157,7,0	0/0:17,0:13:21.03:0,21,350	0/0:18,0:18:38.58:0,39,571	0/0:20,0:19:15.02:0,15,179	0/1:10,0:10:66.71:67,0,243	0/1:11,0:11:36.70:37,0,207	1/1:7,6:13:14.73:229,15,0	0/1:6,5:11:25.52:221,0,26	0/1:12,1:11:11.51:232,0,12	1/1:1,9:10:21.07:399,21,0	1/1:20,0:18:30.15:420,30,0	0/0:17,0:12:15.05:0,15,286	0/0:10,0:8:9.03:0,9,174	0/0:21,0:17:20.94:0,21,369	0/0:19,0:17:21.07:0,21,398	0/0:25,0:24:42.08:0,42,998	0/0:10,0:9:27.09:0,27,471	./.
chr10	22443171	.	CCT	C	1941.34	PASS	AB=0.930;AC=12;AF=0.222;AN=54;BaseQRankSum=1.454;DP=497;FS=18.237;HRun=0;HaplotypeScore=93.8215;InbreedingCoeff=0.3356;MQ=42.53;MQ0=34;MQRankSum=-1.596;QD=16.74;ReadPosRankSum=0.201;VQSLOD=2.0988;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:10:23.11:0,23,410	0/1:3,1:4:45.33:45,0,71	0/0:47,0:9:27.09:0,27,499	0/0:68,0:17:36.64:0,37,693	0/0:17,0:17:39.19:0,39,667	0/0:17,0:15:33.10:0,33,602	0/0:31,0:29:42.60:0,43,729	1/1:4,15:20:51.13:719,51,0	0/0:19,0:19:18.83:0,19,222	1/1:2,11:13:33.11:504,33,0	1/1:0,6:6:15.05:229,15,0	0/0:16,0:12:21.07:0,21,383	0/0:18,0:18:39.13:0,39,739	0/0:17,0:16:18.05:0,18,315	0/1:11,0:11:16.90:17,0,155	0/0:12,0:12:24.99:0,25,193	0/0:12,1:13:17.23:0,17,172	0/0:11,0:11:8.79:0,9,161	0/1:12,0:10:52.44:52,0,186	0/1:10,0:10:42.45:208,0,42	0/1:15,1:15:14.67:255,0,15	0/0:18,0:13:15.05:0,15,288	0/0:11,0:9:9.03:0,9,174	0/0:21,0:17:21.07:0,21,405	0/0:19,0:17:21.07:0,21,391	0/1:20,3:22:77.21:77,0,915	0/0:10,0:9:27.09:0,27,507	./.
chr10	22443177	.	TCCTC	T	1064.71	PASS	AB=1.000;AC=10;AF=0.185;AN=54;BaseQRankSum=1.483;DP=503;FS=2.324;HRun=0;HaplotypeScore=108.9791;InbreedingCoeff=0.2475;MQ=42.58;MQ0=39;MQRankSum=-3.375;QD=11.57;ReadPosRankSum=2.004;VQSLOD=3.1163;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:10:10.43:0,10,316	0/1:4,0:4:14.92:15,0,65	0/0:55,0:10:30.10:0,30,565	0/0:64,0:17:41.66:0,42,690	0/0:18,0:18:40.85:0,41,656	0/0:17,0:15:29.98:0,30,412	0/0:28,0:26:26.11:0,26,470	0/0:18,0:18:41.89:0,42,310	0/1:20,0:20:99:125,0,134	0/0:16,0:15:39.56:0,40,341	0/0:6,0:6:14.72:0,15,110	0/0:18,0:14:21.07:0,21,406	0/0:17,0:17:36.07:0,36,563	0/0:17,0:16:18.06:0,18,283	1/1:7,4:11:27.01:429,27,0	1/1:3,8:11:31.35:517,31,0	0/1:12,0:12:51.66:52,0,53	0/1:11,0:11:28.06:28,0,100	0/1:13,0:11:40.31:40,0,179	0/1:10,0:9:12.93:13,0,121	0/0:17,0:15:13.23:0,13,150	0/0:17,0:12:12.03:0,12,222	0/0:11,0:9:11.93:0,12,205	0/0:20,0:17:21.06:0,21,364	0/0:18,0:16:23.91:0,24,426	0/0:23,0:22:55.23:0,55,952	0/0:10,0:9:27.09:0,27,536	./.
chr10	22443182	.	CT	C	617.36	PASS	AB=0.800;AC=10;AF=0.185;AN=54;BaseQRankSum=2.718;DP=498;FS=0.000;HRun=2;HaplotypeScore=93.8599;InbreedingCoeff=0.0318;MQ=42.22;MQ0=43;MQRankSum=-2.383;QD=5.66;ReadPosRankSum=0.662;VQSLOD=0.4918;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:10:12.24:0,12,180	0/1:2,2:4:12.93:13,0,72	0/0:58,0:10:30.10:0,30,445	0/0:63,1:15:38.57:0,39,492	0/0:18,0:18:34.20:0,34,401	0/0:14,0:12:20.87:0,21,208	0/0:27,0:25:23.84:0,24,276	0/0:18,0:18:29.54:0,30,351	0/1:15,5:20:99:148,0,157	0/0:16,0:15:41.43:0,41,380	0/0:5,0:5:11.91:0,12,100	0/0:19,0:15:20.96:0,21,237	0/0:16,0:16:29.84:0,30,315	0/0:17,0:16:17.84:0,18,165	1/1:7,4:11:11.12:168,11,0	0/1:13,1:14:99:204,0,112	0/1:6,4:10:76.29:77,0,76	0/1:9,1:10:17.64:18,0,109	0/1:12,2:13:99:123,0,104	0/1:8,2:9:1.86:2,0,112	0/1:8,8:14:0.19:0,0,48	0/0:16,0:11:9.03:0,9,129	0/0:11,0:9:11.89:0,12,127	0/0:23,0:20:18.52:0,19,190	0/0:18,0:16:23.72:0,24,269	0/0:22,0:21:58.22:0,58,615	0/0:10,0:9:26.73:0,27,326	./.
chr10	22443183	.	TTCC	T	1162.97	PASS	AB=1.000;AC=30;AF=0.556;AN=54;BaseQRankSum=2.506;DP=497;FS=3.406;HRun=0;HaplotypeScore=102.8444;InbreedingCoeff=0.2801;MQ=42.38;MQ0=43;MQRankSum=-1.793;QD=4.05;ReadPosRankSum=3.168;VQSLOD=1.3587;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:11:17.83:0,18,179	0/0:4,0:4:0.14:0,0,7	0/0:57,0:10:21.07:0,21,280	0/0:62,0:15:26.94:0,27,303	0/0:19,0:19:28.01:0,28,169	1/1:14,0:12:12.02:118,12,0	1/1:27,0:25:6.01:58,6,0	1/1:18,0:18:13.94:77,14,0	0/1:20,0:20:20.38:20,0,264	1/1:16,0:15:8.40:76,8,0	1/1:6,0:6:2.80:13,3,0	1/1:19,0:15:6.01:59,6,0	1/1:16,0:16:14.84:146,15,0	1/1:18,0:17:12.02:118,12,0	1/1:11,0:11:11.57:83,12,0	0/1:14,0:14:32.58:57,0,33	0/1:10,0:10:10.49:10,0,137	0/0:11,0:11:1.74:0,2,158	0/1:14,0:13:32.03:138,0,32	0/0:10,0:9:6.89:0,7,100	0/0:14,0:12:2.87:0,3,15	0/0:16,0:11:0:0,0,0	1/1:11,0:9:3:28,3,0	1/1:10,13:20:3.83:85,4,0	1/1:18,0:16:6.01:57,6,0	0/1:22,0:21:75.30:170,0,75	0/1:10,0:9:20.41:20,0,55	./.
chr10	22443193	.	TCCTC	T	2438.37	PASS	AB=0.927;AC=28;AF=0.500;AN=56;BaseQRankSum=2.628;DP=536;FS=6.344;HRun=0;HaplotypeScore=104.0627;InbreedingCoeff=-0.2192;MQ=43.18;MQ0=43;MQRankSum=-2.902;QD=6.72;ReadPosRankSum=0.865;VQSLOD=1.9450;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:14:30.62:0,31,395	0/1:3,1:4:16.85:36,0,17	0/0:46,0:9:24.04:0,24,301	0/0:53,0:14:7.98:0,8,352	0/0:17,0:17:36.12:0,36,541	0/1:19,0:17:5.02:72,0,5	0/1:32,0:29:31.45:31,0,37	1/1:19,3:22:20.52:385,21,0	0/1:16,5:21:99:326,0,205	1/1:13,3:16:31.77:425,32,0	1/1:5,3:7:5.05:69,5,0	0/1:21,0:17:21.85:32,0,22	0/1:26,0:26:58.36:88,0,58	1/1:25,0:24:11.93:87,12,0	1/1:9,2:12:11.79:151,12,0	0/1:14,5:22:18.76:226,0,19	0/1:7,3:10:21.17:141,0,21	0/1:12,1:13:97.14:146,0,97	0/1:11,0:11:52.87:53,0,83	0/1:9,1:9:53.98:66,0,54	0/0:16,0:15:2.80:0,3,13	0/0:18,0:13:5.53:0,6,26	0/1:12,0:10:14.95:15,0,20	0/1:26,0:23:56.32:56,0,120	0/1:16,0:13:29.92:30,0,68	0/1:19,1:19:93.36:93,0,175	0/1:14,0:13:42.94:43,0,122	1/1:1,0:1:3.01:37,3,0
chr10	22443194	.	CCTCCT	C	1788.42	PASS	AB=1.000;AC=24;AF=0.429;AN=56;BaseQRankSum=-0.436;DP=526;FS=10.868;HRun=0;HaplotypeScore=109.5802;InbreedingCoeff=0.3832;MQ=43.50;MQ0=42;MQRankSum=-1.810;QD=6.62;ReadPosRankSum=3.047;VQSLOD=1.6237;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:15:2.17:0,2,148	0/0:7,0:7:13.72:0,14,73	0/0:46,0:8:21.07:0,21,284	0/0:55,0:14:27.01:0,27,314	0/0:17,0:17:28.50:0,28,258	1/1:3,15:18:12.04:234,12,0	1/1:6,25:28:9.03:160,9,0	0/1:16,0:16:18.81:64,0,19	0/0:21,0:21:18.36:0,18,369	0/1:7,0:15:29.21:29,0,131	0/1:5,0:7:3.50:3,0,57	1/1:6,14:17:9.03:161,9,0	1/1:4,20:25:14.80:298,15,0	1/1:5,20:24:12.04:255,12,0	1/1:6,6:12:11.83:171,12,0	0/1:21,0:21:33.62:34,0,175	0/0:11,0:11:11.76:0,12,193	0/0:13,0:13:18.21:0,18,228	0/1:11,0:12:99:138,0,126	0/0:10,0:9:6.43:0,6,123	0/0:14,0:13:3.01:0,3,41	1/1:7,11:13:9.40:78,9,0	1/1:3,9:10:3.01:62,3,0	0/0:25,0:22:14.55:0,15,121	1/1:5,11:13:6.02:126,6,0	0/1:17,0:19:99:160,0,282	0/0:15,0:13:2.75:0,3,254	0/0:1,0:1:2.68:0,3,11
chr10	22443196	.	TC	T	2228.10	PASS	AB=0.924;AC=38;AF=0.679;AN=56;BaseQRankSum=1.687;DP=546;FS=16.883;HRun=2;HaplotypeScore=96.9428;InbreedingCoeff=0.3216;MQ=43.23;MQ0=42;MQRankSum=-0.402;QD=6.04;ReadPosRankSum=1.526;VQSLOD=-0.5025;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:18:31.88:0,32,214	1/1:6,1:7:4.44:98,4,0	0/0:45,0:7:21.07:0,21,280	0/0:57,0:14:28.72:0,29,302	0/0:19,0:19:30.56:0,31,162	1/1:22,0:18:11.55:62,12,0	1/1:30,0:27:0.94:23,1,0	0/1:19,0:19:2.67:95,0,3	0/1:20,2:22:99:253,0,170	1/1:11,5:16:29.90:236,30,0	1/1:7,1:7:7.38:41,7,0	1/1:18,0:15:0.78:24,1,0	1/1:24,0:24:14.38:77,14,0	1/1:25,1:25:11.50:62,12,0	1/1:10,1:11:8.20:45,8,0	1/1:19,4:23:29.22:182,29,0	0/1:12,1:13:56.55:107,0,57	0/1:11,2:13:75.19:125,0,75	1/1:12,2:14:30.04:278,30,0	0/1:8,1:8:43.66:48,0,44	0/0:14,1:13:2.04:0,2,6	0/0:17,1:13:6.65:0,7,27	1/1:12,0:10:2.84:14,3,0	0/1:25,2:24:69.43:111,0,69	1/1:16,0:13:5.75:29,6,0	1/1:18,2:19:43.06:329,43,0	1/1:16,0:14:25.58:125,26,0	1/1:2,1:3:4.73:41,5,0
chr10	22443197	.	C	CT	3174.18	PASS	AB=0.918;AC=34;AF=0.607;AN=56;BaseQRankSum=0.595;DP=569;FS=30.039;HRun=1;HaplotypeScore=108.6614;InbreedingCoeff=0.2880;MQ=42.71;MQ0=42;MQRankSum=0.701;QD=8.87;ReadPosRankSum=0.722;VQSLOD=-0.3723;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,1:18:32.66:0,33,313	0/1:6,0:7:11.27:71,0,11	0/0:45,0:7:21.07:0,21,280	0/0:59,0:14:29.48:0,29,309	0/0:15,0:19:34.86:0,35,272	1/1:21,1:18:6.03:25,6,0	0/0:27,2:26:2.01:0,2,17	1/1:21,0:21:1.32:133,1,0	0/1:22,0:23:85.97:86,0,152	1/1:17,1:21:44.61:464,45,0	1/1:6,2:7:8.79:119,9,0	0/0:15,3:15:0.92:0,1,16	1/1:23,0:23:3.08:7,3,0	1/1:25,1:25:3.54:6,4,0	0/1:11,0:11:0.29:17,0,0	1/1:12,12:24:35.17:459,35,0	0/1:12,0:14:33.54:34,0,36	0/1:9,1:12:37.50:37,0,42	1/1:5,10:15:33.08:349,33,0	0/1:11,0:11:30.78:31,0,38	1/1:9,6:13:2.98:21,3,0	0/0:14,4:13:7.65:0,8,52	0/1:10,2:10:0.06:0,0,0	0/1:26,2:25:13.19:13,0,96	1/1:13,2:12:0.94:1,1,0	1/1:11,13:26:63.13:846,63,0	1/1:5,12:14:36.01:496,36,0	1/1:5,0:5:11.52:128,12,0
chr10	22443228	.	T	TTC	1762.60	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=0.623;DP=609;FS=15.557;HRun=0;HaplotypeScore=114.7983;InbreedingCoeff=0.8336;MQ=55.99;MQ0=14;MQRankSum=-4.317;QD=24.48;ReadPosRankSum=3.314;VQSLOD=3.9633;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:23:21.16:0,21,453	0/0:7,0:7:6.42:0,6,95	0/0:30,0:14:33.11:0,33,295	0/0:39,0:19:23.96:0,24,222	0/0:25,0:25:51.58:0,52,600	0/0:29,0:25:38.36:0,38,470	0/0:25,0:25:27.08:0,27,333	0/0:24,0:24:30.21:0,30,507	0/0:22,0:22:11.66:0,12,316	0/0:23,0:23:10.48:0,10,334	0/0:12,1:13:30.06:0,30,336	0/0:28,0:26:45.59:0,46,536	0/0:27,0:27:35.96:0,36,407	0/0:32,0:32:54.07:0,54,661	0/0:20,0:20:39.11:0,39,469	0/0:20,1:21:15.78:0,16,302	0/0:17,0:17:28.09:0,28,306	0/1:13,0:13:0.57:1,0,158	0/0:20,0:20:48.82:0,49,567	0/0:16,0:16:26.15:0,26,329	0/0:12,0:12:26.43:0,26,218	0/0:19,0:16:27.15:0,27,277	0/0:13,0:12:15:0,15,189	0/0:32,0:30:54.19:0,54,567	0/0:18,0:16:30.07:0,30,377	1/1:21,6:27:40.38:935,40,0	1/1:15,7:20:51.16:766,51,0	1/1:0,9:10:12.04:200,12,0
chr10	22444500	.	GAA	G	1352.92	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=5.579;DP=654;FS=6.711;HRun=10;HaplotypeScore=89.2107;InbreedingCoeff=0.9966;MQ=71.85;MQ0=0;MQRankSum=-1.755;QD=26.53;ReadPosRankSum=1.712;VQSLOD=3.6216;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:1,0:14:29.94:0,30,103	0/0:10,0:10:30.10:0,30,476	0/0:33,0:24:45.84:0,46,580	0/0:24,0:18:41.33:0,41,505	0/0:38,0:38:99:0,106,1598	0/0:23,0:23:60.20:0,60,951	0/0:25,0:25:57.19:0,57,891	0/0:29,0:30:69.22:0,69,1057	0/0:17,0:17:42.14:0,42,667	0/0:36,0:36:99:0,99,1507	0/0:21,0:23:56.68:0,57,859	0/0:24,0:24:51.16:0,51,788	0/0:23,0:23:57.19:0,57,903	0/0:21,0:21:51.12:0,51,760	0/0:22,0:22:51.17:0,51,789	0/0:23,0:24:59.67:0,60,873	0/0:28,0:28:75.14:0,75,1049	0/0:17,0:18:47.65:0,48,723	0/0:21,0:22:57.18:0,57,866	0/0:39,0:39:93.25:0,93,1385	0/0:17,0:19:51.17:0,51,788	0/0:22,0:22:45.14:0,45,694	0/0:21,0:21:51.17:0,51,809	0/0:13,0:13:33.08:0,33,454	0/0:34,0:34:95.13:0,95,1453	1/1:2,17:19:51.11:558,51,0	1/1:1,24:25:66.17:736,66,0	1/1:1,6:7:18.05:201,18,0
chr10	22444876	.	C	CTGTG	4950.46	PASS	AB=0.851;AC=50;AF=0.893;AN=56;BaseQRankSum=0.874;DP=643;FS=5.497;HRun=0;HaplotypeScore=138.5562;InbreedingCoeff=0.0202;MQ=58.84;MQ0=7;MQRankSum=0.236;QD=7.70;ReadPosRankSum=2.240;VQSLOD=3.6359;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:38,0:54:41.49:61,0,41	1/1:7,0:6:3.01:37,3,0	0/1:40,0:28:0:0,0,0	0/1:41,0:21:1.16:1,0,14	0/1:24,0:28:8.85:9,0,487	1/1:14,13:28:6.84:193,7,0	1/1:13,15:28:22.11:502,22,0	1/1:12,0:12:12:165,12,0	1/1:15,0:13:3.01:66,3,0	1/1:16,0:15:17.89:194,18,0	1/1:26,0:23:2.58:47,3,0	1/1:10,8:19:12.04:244,12,0	1/1:12,8:20:24.55:553,25,0	1/1:8,9:17:18.06:430,18,0	1/1:15,0:24:3:136,3,0	1/1:20,0:26:24.82:126,25,0	1/1:17,0:15:9:88,9,0	1/1:17,0:16:8.89:113,9,0	1/1:16,0:14:12.50:134,13,0	1/1:22,0:19:3.01:50,3,0	1/1:22,0:21:3.01:50,3,0	1/1:7,4:15:11.51:168,12,0	0/1:11,9:20:18.62:476,0,19	1/1:11,11:27:7.15:376,7,0	0/1:16,9:30:33.93:75,0,34	1/1:17,0:17:21.85:208,22,0	1/1:23,0:23:27.06:343,27,0	1/1:9,0:9:11.96:106,12,0
chr10	22444963	.	G	GA	4234.17	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-0.770;DP=559;FS=8.565;HRun=8;HaplotypeScore=64.1909;InbreedingCoeff=0.9486;MQ=55.42;MQ0=17;MQRankSum=0.300;QD=26.63;ReadPosRankSum=-1.761;VQSLOD=4.7679;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:46:99:0,111,1016	0/0:11,0:11:30.01:0,30,275	0/0:8,0:1:3:0,3,27	0/0:10,0:2:6:0,6,55	0/0:32,0:32:59.98:0,60,544	0/0:32,0:31:75.04:0,75,686	0/0:16,0:15:30:0,30,275	1/1:6,10:15:32.91:350,33,0	0/0:17,0:17:48.01:0,48,435	1/1:3,27:29:78.23:900,78,0	1/1:2,16:16:33.10:381,33,0	0/0:17,0:17:45.02:0,45,412	0/0:24,0:23:66.04:0,66,604	0/0:21,0:22:62.40:0,62,557	1/1:3,20:24:54.16:623,54,0	1/1:4,21:25:35.68:650,36,0	0/0:21,0:20:42.01:0,42,384	0/0:13,0:11:30.01:0,30,274	0/0:16,0:15:30.01:0,30,275	0/0:20,0:19:45.02:0,45,412	0/0:9,0:8:17.99:0,18,160	0/0:19,0:19:36.02:0,36,329	0/0:16,0:15:36.02:0,36,330	0/0:21,1:22:19.35:0,19,424	0/0:27,0:27:49.23:0,49,535	1/1:0,10:9:27.08:312,27,0	1/1:2,26:29:75.06:845,75,0	1/1:0,6:6:15.04:173,15,0
chr10	22445423	.	CCAG	C	591.16	PASS	AB=1.000;AC=17;AF=0.850;AN=20;BaseQRankSum=-2.218;DP=173;FS=0.000;HRun=0;HaplotypeScore=25.2096;InbreedingCoeff=0.2080;MQ=56.19;MQ0=73;MQRankSum=-2.559;QD=7.58;ReadPosRankSum=2.832;VQSLOD=1.3205;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,3:2:2.96:19,3,0	./.	0/0:35,0:7:20.96:0,21,281	0/1:33,0:8:11.70:12,0,32	1/1:1,4:5:3.01:54,3,0	./.	1/1:1,3:1:3.01:55,3,0	./.	./.	1/1:2,9:3:9.03:164,9,0	1/1:4,2:1:3.01:54,3,0	./.	./.	./.	1/1:0,3:2:6.02:109,6,0	./.	./.	./.	./.	./.	./.	1/1:0,3:3:9.03:163,9,0	./.	./.	./.	./.	./.	1/1:4,3:1:3.01:55,3,0
chr10	22446836	.	AC	A	5104.92	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=6.559;DP=537;FS=2.362;HRun=3;HaplotypeScore=44.9314;InbreedingCoeff=0.9958;MQ=58.24;MQ0=44;MQRankSum=-0.919;QD=29.17;ReadPosRankSum=-1.032;VQSLOD=3.6030;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:23:63.18:0,63,884	0/0:9,0:7:21.07:0,21,301	0/0:22,0:15:42.14:0,42,583	0/0:11,0:9:24.08:0,24,338	0/0:22,0:20:57.19:0,57,819	0/0:29,0:19:54.18:0,54,777	0/0:15,0:12:36.11:0,36,501	1/1:0,37:35:99:1264,102,0	0/0:17,0:14:39.13:0,39,561	1/1:0,23:22:66.19:806,66,0	1/1:1,27:24:54.17:669,54,0	0/0:17,0:14:42.14:0,42,604	0/0:26,0:23:60.20:0,60,862	0/0:19,0:14:39.09:0,39,536	1/1:3,14:16:33.10:409,33,0	1/1:0,15:14:39.12:483,39,0	0/0:16,0:15:42.14:0,42,599	0/0:10,0:10:30.10:0,30,432	0/0:18,0:14:39.10:0,39,524	0/0:21,0:16:45.15:0,45,648	0/0:12,0:11:30.10:0,30,432	0/0:13,0:10:27.04:0,27,348	0/0:16,0:11:33.07:0,33,452	0/0:20,0:16:48.15:0,48,673	0/0:24,0:19:57.15:0,57,796	1/1:0,28:22:63.18:767,63,0	1/1:1,18:16:42.13:520,42,0	1/1:0,8:5:15.05:186,15,0
chr10	22448207	.	AT	A	2407.65	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.850;DP=742;FS=0.000;HRun=3;HaplotypeScore=68.3981;InbreedingCoeff=0.9993;MQ=70.70;MQ0=0;MQRankSum=-2.628;QD=32.54;ReadPosRankSum=4.300;VQSLOD=3.7981;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:84.27:0,84,1190	0/0:10,0:10:27.09:0,27,387	0/0:26,0:24:63.02:0,63,845	0/0:22,0:21:54.18:0,54,778	0/0:27,0:27:78.25:0,78,1102	0/0:28,0:28:84.28:0,84,1210	0/0:24,0:24:72.23:0,72,1021	0/0:34,0:34:96.31:0,96,1363	0/0:29,0:29:87.29:0,87,1253	0/0:27,0:27:78.26:0,78,1108	0/0:22,0:22:66.19:0,66,913	0/0:35,0:35:99:0,102,1469	0/0:29,0:29:87.28:0,87,1234	0/0:44,0:44:99:0,132,1880	1/1:0,36:36:99:1265,102,0	1/1:2,36:37:99:1265,102,0	0/0:13,0:13:36.12:0,36,518	0/0:11,0:11:33.11:0,33,475	0/0:18,0:18:48.15:0,48,674	0/0:25,0:25:75.25:0,75,1079	0/0:29,0:29:87.27:0,87,1223	0/0:30,0:30:84.28:0,84,1208	0/0:24,0:24:72.22:0,72,1001	0/0:40,0:40:99:0,117,1661	0/0:22,0:22:66.22:0,66,950	0/0:23,0:23:66.21:0,66,921	0/0:32,0:32:96.28:0,96,1326	0/0:14,0:14:42.12:0,42,585
chr10	22448890	.	A	AC	1788.77	PASS	AB=0.762;AC=14;AF=0.250;AN=56;BaseQRankSum=-7.766;DP=588;FS=21.671;HRun=9;HaplotypeScore=75.7991;InbreedingCoeff=0.7253;MQ=86.35;MQ0=0;MQRankSum=-5.714;QD=12.78;ReadPosRankSum=-0.207;VQSLOD=1.5079;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:29:67.99:0,68,576	1/1:3,3:6:12.02:125,12,0	0/0:21,0:21:40.85:0,41,336	0/0:24,0:23:33.31:0,33,271	0/0:21,0:22:41:0,41,344	0/0:26,0:26:26.78:0,27,458	0/1:17,2:20:19.37:19,0,292	0/0:6,0:25:30.39:0,30,92	1/1:3,21:24:21.55:435,22,0	0/0:3,0:22:28.06:0,28,88	0/0:3,0:21:38.70:0,39,113	0/0:17,0:18:38:0,38,317	0/0:22,0:23:37.76:0,38,476	0/0:22,0:22:50.95:0,51,436	0/0:24,0:24:62.92:0,63,536	0/0:27,0:29:39.89:0,40,502	1/1:6,24:30:11.98:577,12,0	1/1:1,2:3:3.01:33,3,0	0/1:6,10:16:22.03:235,0,22	1/1:3,17:20:9.92:298,10,0	1/1:5,16:21:5.15:241,5,0	0/0:19,0:19:44.98:0,45,390	0/0:19,0:19:50.95:0,51,436	0/0:23,0:22:47.97:0,48,417	0/0:16,0:16:44.99:0,45,390	0/0:23,0:23:53.97:0,54,465	0/0:26,0:27:67.04:0,67,556	0/0:15,0:15:38.98:0,39,338
chr10	22449892	.	C	CT	1133.07	PASS	AB=0.588;AC=5;AF=0.089;AN=56;BaseQRankSum=-6.308;DP=647;FS=5.498;HRun=10;HaplotypeScore=67.6703;InbreedingCoeff=0.7309;MQ=70.49;MQ0=0;MQRankSum=-0.018;QD=17.43;ReadPosRankSum=-0.365;VQSLOD=4.1074;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:92.80:0,93,760	0/0:12,0:12:29.94:0,30,241	0/0:10,0:10:8.97:0,9,97	0/0:13,0:13:10.81:0,11,79	0/0:34,0:34:49.10:0,49,558	0/0:20,0:20:47.91:0,48,391	0/0:22,0:23:49.97:0,50,400	0/0:30,0:30:65.91:0,66,542	0/0:16,1:17:18.96:0,19,362	0/0:31,0:32:70.92:0,71,572	0/0:25,0:26:58.05:0,58,439	0/0:24,0:25:67.96:0,68,548	0/0:27,0:29:73.94:0,74,597	0/0:19,0:19:31.24:0,31,364	0/0:25,0:28:72.01:0,72,556	0/0:21,1:23:26.96:0,27,414	0/0:30,0:30:65.89:0,66,542	0/0:9,0:9:11.96:0,12,98	0/0:14,0:16:40.01:0,40,303	0/0:34,0:34:86.80:0,87,704	0/0:14,0:14:35.71:0,36,279	0/0:25,0:28:63.95:0,64,499	0/0:23,0:23:55.94:0,56,447	0/0:25,0:25:65.92:0,66,542	0/0:20,0:20:45.78:0,46,365	0/1:9,21:30:32.31:484,0,32	1/1:8,15:23:59.95:585,60,0	1/1:6,6:12:18.05:192,18,0
chr10	22451057	.	A	AT	15612.24	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-8.494;DP=551;FS=2.653;HRun=6;HaplotypeScore=52.8910;InbreedingCoeff=0.9751;MQ=74.75;MQ0=0;MQRankSum=-3.886;QD=31.48;ReadPosRankSum=1.704;VQSLOD=5.3735;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,17:20:47.41:567,47,0	1/1:2,8:10:24.08:302,24,0	0/0:13,0:13:36.04:0,36,355	0/0:8,0:8:15.02:0,15,149	0/0:34,0:34:93.16:0,93,932	1/1:2,20:22:51.16:642,51,0	1/1:0,7:7:21.07:264,21,0	1/1:3,29:32:87.24:1054,87,0	1/1:2,15:17:42.13:528,42,0	1/1:1,29:30:90.29:1129,90,0	1/1:1,25:26:57.10:696,57,0	1/1:2,15:17:45.14:558,45,0	1/1:3,20:23:51.16:642,51,0	1/1:4,16:20:36.12:453,36,0	1/1:0,20:20:57.18:717,57,0	1/1:1,24:25:63.05:792,63,0	1/1:2,15:17:45.10:548,45,0	1/1:1,9:10:27.09:340,27,0	1/1:4,14:18:42.12:515,42,0	1/1:2,34:36:99:1189,99,0	1/1:0,4:4:12.04:151,12,0	1/1:2,16:18:45.14:563,45,0	1/1:2,14:16:39.06:484,39,0	1/1:0,5:5:15.05:189,15,0	1/1:2,31:32:81.26:1019,81,0	1/1:6,19:25:69.20:852,69,0	1/1:6,24:31:84.25:1031,84,0	1/1:5,9:14:33.08:388,33,0
chr10	22451099	.	AT	A	1730.10	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=5.248;DP=585;FS=5.137;HRun=9;HaplotypeScore=86.2288;InbreedingCoeff=0.9424;MQ=73.31;MQ0=0;MQRankSum=-3.429;QD=23.07;ReadPosRankSum=-0.142;VQSLOD=4.1738;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:47.88:0,48,531	0/0:16,0:16:45.13:0,45,518	0/0:10,1:11:21.04:0,21,229	0/0:10,0:10:15.01:0,15,153	0/0:40,0:40:99:0,114,1286	0/0:26,0:27:78.05:0,78,871	0/0:7,0:7:18.05:0,18,208	0/0:28,0:28:57.17:0,57,658	0/0:18,0:18:48.13:0,48,544	0/0:37,0:37:99:0,99,1120	0/0:19,2:21:5.23:0,5,552	0/0:22,0:22:57.13:0,57,636	0/0:27,0:27:69.20:0,69,796	0/0:20,0:20:51.15:0,51,589	0/0:24,0:24:66.17:0,66,744	0/0:25,0:25:63.18:0,63,719	0/0:19,0:19:48.14:0,48,554	0/0:15,0:15:40:0,40,452	0/0:21,0:21:51.14:0,51,579	0/0:28,1:29:56.79:0,57,897	0/0:6,0:6:15.04:0,15,172	0/0:14,0:14:42.12:0,42,485	0/0:18,0:18:54.13:0,54,596	0/0:8,0:8:20.98:0,21,225	0/0:29,0:29:78.22:0,78,893	1/1:1,21:23:65.07:583,65,0	1/1:1,33:34:96.04:878,96,0	1/1:3,15:18:45.01:412,45,0
chr10	22451809	.	T	TGGC	2315.10	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-6.692;DP=623;FS=16.993;HRun=0;HaplotypeScore=86.5169;InbreedingCoeff=0.9738;MQ=68.38;MQ0=6;MQRankSum=-4.589;QD=46.30;ReadPosRankSum=1.499;VQSLOD=4.5880;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,108,1697	0/0:6,0:6:18.06:0,18,294	0/0:22,0:14:15.27:0,15,378	0/0:24,0:13:10.87:0,11,297	0/0:21,0:21:57.18:0,57,903	0/0:24,0:24:60.20:0,60,978	0/0:37,0:37:99:0,111,1658	0/0:36,0:35:99:0,99,1525	0/0:21,0:21:57.19:0,57,928	0/0:12,0:12:33.11:0,33,538	0/0:7,0:7:18.06:0,18,291	0/0:31,0:31:84.25:0,84,1340	0/0:18,0:18:51.12:0,51,756	0/0:31,0:31:87.28:0,87,1395	0/0:24,0:24:60.20:0,60,980	0/0:21,0:21:60.20:0,60,980	0/0:34,0:34:96.30:0,96,1525	0/0:28,0:28:84.27:0,84,1343	0/0:17,0:17:45.14:0,45,690	0/0:21,0:20:54.18:0,54,880	0/0:32,0:32:87.30:0,87,1416	0/0:13,0:13:30.09:0,30,466	0/0:11,0:11:24.08:0,24,388	0/0:23,0:23:69.18:0,69,1075	0/0:21,0:21:57.19:0,57,930	1/1:3,12:17:36.11:762,36,0	1/1:4,20:23:51.18:1094,51,0	1/1:0,9:9:27.09:601,27,0
chr10	22454138	.	TTGTG	T	1829.71	PASS	AB=0.732;AC=16;AF=0.296;AN=54;BaseQRankSum=-0.450;DP=508;FS=2.383;HRun=0;HaplotypeScore=94.4133;InbreedingCoeff=0.6474;MQ=62.88;MQ0=8;MQRankSum=3.063;QD=11.80;ReadPosRankSum=3.377;VQSLOD=3.1469;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:15:2.90:0,3,23	0/0:6,0:12:8.71:0,9,156	0/0:23,0:14:3.01:0,3,43	./.	0/0:24,0:25:9.01:0,9,125	1/1:11,16:28:24.07:358,24,0	0/1:10,6:16:12.92:129,0,13	0/0:23,0:23:25.79:0,26,436	0/0:15,0:15:15.05:0,15,316	0/0:19,0:20:27.06:0,27,505	0/0:22,0:22:5.94:0,6,100	1/1:5,10:15:20.68:330,21,0	1/1:6,9:16:17.86:263,18,0	1/1:7,8:15:9.50:142,10,0	0/0:8,0:16:18.04:0,18,286	0/0:9,0:20:18.53:0,19,352	0/0:14,0:22:13.40:0,13,213	0/0:7,0:10:15.01:0,15,229	0/0:15,0:18:24.08:0,24,432	0/0:11,0:16:0.68:0,1,48	0/0:7,0:13:3.01:0,3,60	1/1:6,9:15:8.69:141,9,0	0/1:9,4:14:3.46:86,0,3	1/1:6,11:17:18.06:283,18,0	1/1:9,10:19:18.06:281,18,0	0/0:26,0:29:30.10:0,30,584	0/0:11,0:21:4.57:0,5,57	0/0:7,0:14:11.78:0,12,165
chr10	22454722	.	G	GTT	1702.50	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-10.350;DP=709;FS=1.284;HRun=8;HaplotypeScore=87.7805;InbreedingCoeff=0.9977;MQ=83.91;MQ0=0;MQRankSum=-4.283;QD=34.74;ReadPosRankSum=1.145;VQSLOD=3.6454;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:60.11:0,60,657	0/0:10,0:10:21.04:0,21,234	0/0:17,0:17:42.11:0,42,465	0/0:25,0:25:56.38:0,56,584	0/0:39,0:39:99:0,108,1188	0/0:26,0:26:72.16:0,72,782	0/0:17,0:17:51.08:0,51,537	0/0:25,0:25:50.98:0,51,526	0/0:21,0:21:51.13:0,51,569	0/0:30,0:30:72.02:0,72,764	0/0:19,0:19:48.12:0,48,535	0/0:30,0:30:81.21:0,81,903	0/0:39,0:39:99:0,105,1160	0/0:21,0:21:60.16:0,60,669	1/1:2,19:21:48.16:762,48,0	1/1:3,24:28:38.80:1062,39,0	0/0:24,0:24:66.17:0,66,736	0/0:11,0:11:33.06:0,33,355	0/0:23,0:23:45.08:0,45,495	0/0:36,0:36:93.20:0,93,1024	0/0:16,0:16:39.10:0,39,435	0/0:23,0:23:60.12:0,60,651	0/0:31,0:31:90.20:0,90,985	0/0:28,0:28:75.16:0,75,826	0/0:33,0:33:93.24:0,93,1037	0/0:30,0:30:81.19:0,81,895	0/0:29,0:28:56.68:0,57,833	0/0:32,0:32:81.17:0,81,885
chr10	22455268	.	G	GA	14934.05	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-7.989;DP=537;FS=0.000;HRun=7;HaplotypeScore=49.6189;InbreedingCoeff=0.9675;MQ=77.10;MQ0=0;MQRankSum=-4.699;QD=29.63;ReadPosRankSum=5.242;VQSLOD=4.7411;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,23:27:63.19:761,63,0	1/1:2,4:6:15.04:178,15,0	0/0:19,0:19:32.61:0,33,288	0/0:14,0:14:32.89:0,33,279	1/1:5,25:30:74.52:867,75,0	1/1:3,14:16:39.12:471,39,0	1/1:1,15:16:36.37:467,36,0	1/1:3,28:31:84.21:968,84,0	1/1:3,22:25:60.18:725,60,0	1/1:0,24:24:72.22:868,72,0	1/1:2,19:21:57.09:652,57,0	1/1:2,14:16:36.11:435,36,0	1/1:3,19:22:42.13:507,42,0	1/1:3,19:22:57.17:685,57,0	1/1:2,13:15:36.11:435,36,0	1/1:2,16:18:45.14:544,45,0	1/1:0,11:11:30.09:362,30,0	1/1:2,15:17:30.09:362,30,0	1/1:1,13:14:39.08:435,39,0	1/1:1,24:25:72.22:870,72,0	1/1:2,7:9:18.06:217,18,0	1/1:0,17:17:45.14:539,45,0	1/1:3,22:25:60.18:725,60,0	1/1:1,4:5:12.04:145,12,0	1/1:3,29:32:78.24:942,78,0	1/1:2,19:21:57.17:688,57,0	1/1:3,26:29:72.22:868,72,0	1/1:1,8:9:18.06:218,18,0
chr10	22456699	.	A	ATACC	4956.74	PASS	AB=0.571;AC=5;AF=0.089;AN=56;BaseQRankSum=-9.981;DP=715;FS=0.475;HRun=0;HaplotypeScore=107.9339;InbreedingCoeff=0.7864;MQ=83.34;MQ0=0;MQRankSum=-1.999;QD=61.19;ReadPosRankSum=1.950;VQSLOD=6.7826;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:57.17:0,57,1030	0/0:14,0:14:42.13:0,42,743	0/0:29,0:29:74.99:0,75,1202	0/0:12,0:12:33.11:0,33,576	0/0:38,0:38:99:0,111,2064	0/0:32,0:32:96.30:0,96,1718	0/0:26,0:26:75.26:0,75,1368	0/0:39,0:39:99:0,105,1923	0/0:27,0:27:78.27:0,78,1448	0/0:28,0:28:84.29:0,84,1549	0/0:25,0:25:66.23:0,66,1232	0/0:18,0:18:54.18:0,54,958	0/0:37,0:37:99:0,111,1966	0/0:20,0:20:60.21:0,60,1114	0/0:28,0:28:84.29:0,84,1561	0/0:30,0:30:84.29:0,84,1543	0/0:13,0:13:30.09:0,30,530	0/0:9,0:9:27.09:0,27,493	0/0:24,0:24:72.23:0,72,1271	0/0:36,0:36:99:0,108,1955	0/0:28,0:28:75.24:0,75,1359	0/0:31,0:31:84.29:0,84,1567	0/0:21,0:21:63.22:0,63,1176	0/0:11,0:11:33.11:0,33,604	0/0:37,0:37:99:0,99,1837	0/1:9,26:36:15.68:2210,0,16	1/1:6,22:30:66.23:1707,66,0	1/1:0,15:15:39.13:1040,39,0
chr10	22457477	.	TCACA	T	13806.77	PASS	AB=0.667;AC=33;AF=0.589;AN=56;BaseQRankSum=12.996;DP=559;FS=0.326;HRun=0;HaplotypeScore=156.6799;InbreedingCoeff=0.9222;MQ=66.71;MQ0=0;MQRankSum=-16.659;QD=48.28;ReadPosRankSum=0.341;VQSLOD=5.5393;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,11:16:33.11:658,33,0	1/1:1,10:11:30.10:598,30,0	0/0:13,0:13:29.57:0,30,567	0/0:11,0:11:24.04:0,24,558	0/0:35,0:35:99:0,99,2755	1/1:1,17:18:54.19:1062,54,0	1/1:2,12:14:39.12:743,39,0	0/0:35,0:35:99:0,102,2525	1/1:1,11:12:33.11:657,33,0	0/0:31,0:31:90.31:0,90,2493	0/0:20,0:20:57.20:0,57,1577	1/1:5,18:23:60.21:1194,60,0	1/1:2,22:24:69.24:1374,69,0	1/1:1,14:15:45.15:879,45,0	0/0:23,0:23:63.20:0,63,1678	0/0:22,0:22:63.22:0,63,1762	1/1:3,7:10:18.06:352,18,0	0/1:3,3:6:7.96:168,0,8	1/1:7,13:20:48.08:844,48,0	1/1:5,19:24:63.19:1206,63,0	1/1:3,6:9:9.03:179,9,0	1/1:3,27:30:78.18:1511,78,0	1/1:6,19:25:57.20:1135,57,0	1/1:4,6:10:12.04:231,12,0	1/1:1,18:19:51.18:1016,51,0	0/0:27,0:27:81.28:0,81,2244	0/0:40,0:40:99:0,105,2831	0/0:16,0:16:36.12:0,36,1007
chr10	22457506	.	CA	C	376.73	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=3.132;DP=619;FS=0.000;HRun=1;HaplotypeScore=205.2771;InbreedingCoeff=0.6171;MQ=67.65;MQ0=0;MQRankSum=-3.536;QD=12.15;ReadPosRankSum=-2.033;VQSLOD=1.5795;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,20:20:33.11:459,33,0	0/0:12,0:12:30.10:0,30,478	0/1:11,0:11:23.75:24,0,252	0/0:12,0:12:24.05:0,24,318	0/0:42,0:42:99:0,126,1990	0/0:20,0:20:57.19:0,57,907	0/0:16,0:16:48.15:0,48,742	0/0:33,0:33:90.25:0,90,1389	0/0:17,0:17:51.17:0,51,814	0/0:35,0:35:99:0,105,1654	0/0:18,0:18:51.17:0,51,815	0/0:30,0:30:87.30:0,87,1388	0/0:25,0:25:75.26:0,75,1193	0/0:20,0:20:54.18:0,54,860	0/0:23,0:23:63.21:0,63,1007	0/0:21,0:21:60.19:0,60,937	0/0:10,0:10:21.07:0,21,335	0/0:9,0:9:21.07:0,21,335	0/0:19,0:19:54.18:0,54,847	0/0:28,0:28:72.25:0,72,1148	0/0:7,0:7:9.03:0,9,144	0/0:27,0:27:69.24:0,69,1095	0/0:27,0:27:75.24:0,75,1173	0/0:15,0:15:23.93:0,24,378	0/0:26,0:26:66.21:0,66,1031	0/0:35,0:35:99:0,105,1673	0/0:39,0:39:99:0,99,1579	0/0:22,0:22:54.18:0,54,863
chr10	22457548	.	C	CAGAA	37610.70	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-7.046;DP=703;FS=7.919;HRun=0;HaplotypeScore=123.9734;InbreedingCoeff=0.9805;MQ=78.28;MQ0=0;MQRankSum=-9.901;QD=56.81;ReadPosRankSum=6.218;VQSLOD=6.0172;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,12:20:30.06:789,30,0	1/1:4,9:13:27.09:712,27,0	0/0:20,0:20:56.53:0,57,805	0/0:21,0:21:47.57:0,48,765	1/1:7,40:50:99:2761,117,0	1/1:3,18:23:54.19:1424,54,0	1/1:3,16:19:39.09:970,39,0	1/1:7,31:41:99:2477,102,0	1/1:1,15:21:48.16:1214,48,0	1/1:11,19:30:63.22:1544,63,0	1/1:3,17:20:42.06:990,42,0	1/1:7,24:32:66.23:1741,66,0	1/1:5,20:26:57.11:1384,57,0	1/1:1,18:20:48.16:1266,48,0	1/1:1,27:30:72.25:1888,72,0	1/1:0,20:22:54.19:1426,54,0	1/1:0,8:10:21.07:469,21,0	1/1:0,8:11:24.08:593,24,0	1/1:8,15:26:54.17:1340,54,0	1/1:3,31:37:99:2143,99,0	1/1:0,7:7:12.04:316,12,0	1/1:8,20:28:66.23:1620,66,0	1/1:5,31:37:87.25:2026,87,0	1/1:1,17:20:42.14:1108,42,0	1/1:8,14:22:51.12:1191,51,0	1/1:3,31:37:99:2600,102,0	1/1:1,37:40:93.02:2352,93,0	1/1:0,20:20:48.16:1267,48,0
chr10	22458723	.	ATG	A	13983.22	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=9.249;DP=979;FS=2.100;HRun=0;HaplotypeScore=125.6431;InbreedingCoeff=0.9822;MQ=62.75;MQ0=17;MQRankSum=1.343;QD=25.70;ReadPosRankSum=7.205;VQSLOD=5.5734;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,21:26:38.59:540,39,0	1/1:1,5:5:6.02:78,6,0	0/0:58,0:13:34.22:0,34,485	0/0:49,0:19:14.69:0,15,287	0/0:27,0:27:69.22:0,69,1134	1/1:1,36:37:81.26:1053,81,0	1/1:3,25:28:54.18:702,54,0	0/0:53,0:53:99:0,117,1925	1/1:4,35:39:81.26:1053,81,0	0/0:41,0:41:99:0,108,1821	0/0:20,0:20:48.14:0,48,764	1/1:5,29:34:54.17:702,54,0	1/1:3,41:44:99:1321,102,0	1/1:1,28:27:53.91:702,54,0	0/0:54,0:54:99:0,105,1725	0/0:42,0:42:89.75:0,90,1383	1/1:0,25:24:48.11:605,48,0	1/1:4,20:24:23.69:537,24,0	1/1:9,11:20:30.10:389,30,0	1/1:2,30:32:78.12:942,78,0	1/1:9,69:76:99:2218,172,0	1/1:1,23:23:54.05:645,54,0	1/1:0,26:26:63.19:819,63,0	1/1:3,36:38:78.25:1014,78,0	1/1:7,26:33:51.17:662,51,0	0/0:38,0:38:99:0,105,1659	0/0:37,0:37:99:0,108,1794	0/0:15,0:15:45.15:0,45,749
chr10	22458783	.	TTGTG	T	3809.17	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=2.458;DP=1131;FS=2.559;HRun=0;HaplotypeScore=238.6059;InbreedingCoeff=0.9994;MQ=59.26;MQ0=11;MQRankSum=2.190;QD=32.56;ReadPosRankSum=3.850;VQSLOD=3.7975;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,126,2650	0/0:11,0:10:27.09:0,27,675	0/0:55,0:23:42.62:0,43,1000	0/0:52,0:21:47.95:0,48,752	0/0:39,0:39:99:0,108,2630	0/0:45,0:45:99:0,108,2587	0/0:30,0:30:66.23:0,66,1646	0/0:8,0:46:94.41:0,94,465	0/0:40,0:40:99:0,105,2394	0/0:8,0:37:87.02:0,87,423	0/0:3,0:23:42.04:0,42,197	0/0:36,0:36:84.27:0,84,2079	0/0:54,0:54:99:0,144,3414	0/0:35,0:35:90.29:0,90,2154	1/1:1,58:59:99:2011,120,0	1/1:4,54:58:99:1798,114,0	0/0:39,0:39:99:0,99,2229	0/0:25,0:25:54.18:0,54,1317	0/0:28,0:25:63.07:0,63,1317	0/0:44,0:44:99:0,117,2797	0/0:86,0:85:99:0,217,4972	0/0:36,0:36:99:0,102,2410	0/0:30,0:30:75.24:0,75,1732	0/0:45,0:45:99:0,111,2611	0/0:29,0:29:66.21:0,66,1496	0/0:41,0:41:99:0,117,2765	0/0:32,0:32:87.30:0,87,2163	0/0:25,0:25:69.18:0,69,1662
chr10	22460065	.	T	TA	13120.93	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-10.306;DP=579;FS=3.998;HRun=7;HaplotypeScore=52.4386;InbreedingCoeff=0.9876;MQ=78.80;MQ0=0;MQRankSum=-0.401;QD=29.96;ReadPosRankSum=2.094;VQSLOD=5.4423;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,17:18:45.14:544,45,0	1/1:2,5:7:15.05:181,15,0	0/0:18,0:18:30.68:0,31,287	0/0:12,0:12:12.08:0,12,191	0/0:37,0:37:99:0,102,956	1/1:7,24:31:63.19:756,63,0	1/1:0,12:12:33.10:395,33,0	1/1:4,22:26:63.16:736,63,0	1/1:0,16:16:45.14:543,45,0	1/1:1,17:18:51.12:591,51,0	1/1:5,27:32:75.23:906,75,0	1/1:0,16:16:48.15:580,48,0	1/1:6,30:36:84.26:1015,84,0	1/1:4,16:20:48.14:575,48,0	1/1:1,29:30:78.24:942,78,0	1/1:0,13:13:33.10:399,33,0	1/1:0,14:14:33.10:399,33,0	1/1:1,6:7:18.06:217,18,0	1/1:1,19:20:60.15:699,60,0	1/1:1,27:28:78.20:925,78,0	1/1:1,17:18:48.15:580,48,0	1/1:1,11:12:27.08:326,27,0	1/1:2,19:21:54.17:652,54,0	1/1:3,9:12:21.06:254,21,0	1/1:1,30:31:75.23:906,75,0	0/0:25,1:26:35.87:0,36,630	0/0:35,0:34:99:0,99,945	0/0:13,0:13:36.06:0,36,348
chr10	22461280	.	GACAC	G	23240.77	PASS	AB=0.663;AC=50;AF=0.893;AN=56;BaseQRankSum=-5.979;DP=1003;FS=0.548;HRun=0;HaplotypeScore=193.0195;InbreedingCoeff=0.5738;MQ=60.57;MQ0=13;MQRankSum=6.114;QD=25.23;ReadPosRankSum=8.843;VQSLOD=3.8688;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,35:43:45.15:763,45,0	1/1:3,3:6:15.04:225,15,0	0/0:35,0:22:21:0,21,308	0/0:47,0:22:41.39:0,41,588	1/1:24,30:54:32.03:1126,32,0	1/1:4,35:39:60.19:1017,60,0	1/1:3,19:22:30.10:509,30,0	1/1:21,18:35:48.07:617,48,0	1/1:5,23:29:45.15:763,45,0	1/1:10,25:36:69.17:1309,69,0	1/1:4,22:27:33.37:606,33,0	1/1:5,41:46:75.26:1265,75,0	1/1:4,34:38:63.21:1067,63,0	1/1:5,39:45:71.68:1456,72,0	1/1:31,27:60:78.34:1562,78,0	1/1:10,38:49:67.32:1276,67,0	1/1:8,19:28:42.14:689,42,0	1/1:3,11:14:24.08:390,24,0	1/1:11,6:15:3.08:263,3,0	1/1:12,30:42:66.22:1119,66,0	1/1:11,34:43:60.21:1017,60,0	1/1:5,26:32:13.28:872,13,0	1/1:6,26:33:44.45:903,44,0	1/1:6,28:35:48.16:814,48,0	1/1:5,25:32:50.91:823,51,0	0/1:36,23:58:99:1495,0,129	1/1:8,20:27:50.76:824,51,0	0/1:7,13:20:24.91:472,0,25
chr10	22461354	.	GAC	G	1852.18	PASS	AB=0.975;AC=13;AF=0.241;AN=54;BaseQRankSum=-7.147;DP=887;FS=3.880;HRun=0;HaplotypeScore=191.1690;InbreedingCoeff=0.0962;MQ=50.46;MQ0=25;MQRankSum=1.984;QD=5.38;ReadPosRankSum=2.953;VQSLOD=3.2729;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:22.97:0,23,252	0/0:8,0:7:2.94:0,3,18	./.	0/0:26,0:5:2.98:0,3,22	0/0:54,0:56:52.83:0,53,439	0/1:27,1:27:23.85:129,0,24	0/1:25,0:25:1.47:209,0,1	0/0:44,0:39:13.38:0,13,380	0/0:25,0:25:27.40:0,27,170	0/0:54,0:51:83.08:0,83,755	0/1:21,0:20:9.67:10,0,84	0/1:40,1:41:31.78:309,0,32	1/1:24,1:25:24.62:216,25,0	0/1:39,1:39:4.15:261,0,4	0/0:58,0:58:62.31:0,62,506	0/0:44,0:43:37.81:0,38,264	0/0:15,0:13:11.54:0,12,67	0/0:8,0:9:8.84:0,9,81	0/0:30,0:26:30.12:0,30,226	0/0:27,0:26:17.41:0,17,146	0/0:25,0:22:15.32:0,15,101	0/1:23,0:21:9.39:102,0,9	0/1:23,1:23:83.15:226,0,83	0/1:27,2:29:44.17:259,0,44	1/1:30,2:32:1.39:261,1,0	0/1:50,0:53:22.26:22,0,423	0/0:30,0:33:48.56:0,49,389	0/0:24,0:25:15.67:0,16,292
chr10	22461374	.	CAGAGAGAGAG	C	435.31	PASS	AB=0.892;AC=5;AF=0.096;AN=52;BaseQRankSum=1.554;DP=774;FS=0.000;HRun=0;HaplotypeScore=266.2314;InbreedingCoeff=0.6102;MQ=48.87;MQ0=15;MQRankSum=-1.535;QD=3.69;ReadPosRankSum=-1.224;VQSLOD=2.1772;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:33:44.94:98,0,45	0/0:13,0:12:21.07:0,21,871	./.	./.	0/0:34,0:32:25.68:0,26,686	0/0:31,0:30:36.94:0,37,1469	0/0:27,0:26:32.69:0,33,1275	0/0:43,0:40:44.83:0,45,991	0/0:31,0:31:39.13:0,39,1527	0/0:43,0:40:49.05:0,49,1900	0/0:20,0:19:5.82:0,6,226	0/0:38,0:38:54.19:0,54,2330	0/0:27,0:27:34:0,34,1276	0/0:28,0:28:50.96:0,51,1970	1/1:28,12:52:4.89:93,5,0	1/1:18,9:31:10.55:356,11,0	0/0:17,0:15:18.95:0,19,760	0/0:8,0:8:5.83:0,6,288	0/0:26,0:24:39.03:0,39,971	0/0:30,0:29:33.58:0,34,1438	0/0:28,0:24:13.27:0,13,436	0/0:22,0:20:36.12:0,36,1467	0/0:23,0:22:36.12:0,36,1485	0/0:30,0:30:54.14:0,54,2089	0/0:25,0:25:29.76:0,30,1014	0/0:43,0:40:75.25:0,75,2734	0/0:31,0:29:50.63:0,51,1811	0/0:23,0:23:45.15:0,45,1638
chr10	22462623	.	AT	A	2827.54	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=11.936;DP=690;FS=1.755;HRun=8;HaplotypeScore=65.4048;InbreedingCoeff=0.9986;MQ=80.27;MQ0=0;MQRankSum=-3.463;QD=21.92;ReadPosRankSum=0.827;VQSLOD=4.0920;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:45.11:0,45,521	0/0:7,0:7:21.06:0,21,254	0/0:21,0:21:44.60:0,45,477	0/0:17,0:17:35.87:0,36,391	1/1:4,32:36:89.89:825,90,0	0/0:26,0:26:72.21:0,72,854	0/0:25,0:25:69.19:0,69,811	0/0:35,0:35:84.24:0,84,994	0/0:19,0:19:54.14:0,54,630	0/0:25,0:25:69.21:0,69,833	0/0:20,0:20:51.14:0,51,595	0/0:29,0:29:81.25:0,81,978	0/0:31,0:31:90.28:0,90,1087	0/0:20,0:20:54.17:0,54,652	0/0:41,0:41:99:0,114,1364	0/0:24,0:24:69.21:0,69,833	0/0:22,0:22:54.17:0,54,652	0/0:12,0:12:30.09:0,30,361	0/0:18,0:18:42.11:0,42,495	0/0:36,0:36:99:0,102,1212	0/0:17,0:17:48.14:0,48,569	0/0:27,0:27:72.22:0,72,869	0/0:28,0:28:72.19:0,72,840	0/0:21,0:21:63.18:0,63,750	0/0:23,0:23:63.19:0,63,761	1/1:1,29:30:87.11:830,87,0	1/1:3,40:43:99:956,99,0	1/1:7,13:20:39.06:377,39,0
chr10	22462937	.	GT	G	11414.90	PASS	AB=0.709;AC=44;AF=0.786;AN=56;BaseQRankSum=8.358;DP=665;FS=2.421;HRun=10;HaplotypeScore=76.7784;InbreedingCoeff=0.7903;MQ=70.70;MQ0=0;MQRankSum=-3.022;QD=20.72;ReadPosRankSum=1.212;VQSLOD=5.8538;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,12:13:29.99:260,30,0	0/1:3,11:14:30.68:224,0,31	0/0:15,0:15:33.05:0,33,337	0/1:5,1:5:15.58:16,0,54	0/0:28,0:30:65.98:0,66,686	1/1:4,23:27:56.99:495,57,0	1/1:3,20:23:56.98:495,57,0	1/1:6,28:34:53.80:696,54,0	1/1:1,21:22:59.99:521,60,0	1/1:5,25:30:71.94:625,72,0	1/1:3,22:25:65.93:567,66,0	1/1:4,16:20:41.99:365,42,0	1/1:3,29:32:77.84:677,78,0	1/1:1,28:29:74.98:651,75,0	1/1:3,24:27:68.98:599,69,0	1/1:1,25:26:71.97:622,72,0	1/1:2,21:23:56.37:478,56,0	1/1:3,14:17:38.98:339,39,0	1/1:1,19:21:58.97:489,59,0	1/1:3,28:31:80.97:703,81,0	1/1:2,19:21:50.98:443,51,0	1/1:3,26:29:62.95:547,63,0	1/1:3,25:28:53.30:467,53,0	1/1:1,13:14:38.98:339,39,0	1/1:4,35:39:65.77:800,66,0	0/0:18,1:20:28.15:0,28,524	0/0:39,0:39:99:0,99,1087	0/0:8,0:10:23.73:0,24,227
chr10	22463993	.	GT	G	1597.23	PASS	AB=0.742;AC=25;AF=0.446;AN=56;BaseQRankSum=4.230;DP=430;FS=1.482;HRun=14;HaplotypeScore=55.3848;InbreedingCoeff=0.4569;MQ=68.31;MQ0=2;MQRankSum=2.575;QD=6.55;ReadPosRankSum=4.429;VQSLOD=2.2955;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,8:12:22.78:147,23,0	1/1:1,3:5:7.98:47,8,0	0/0:12,0:8:3.12:0,3,51	0/0:7,0:6:5.72:0,6,29	0/0:29,1:31:54:0,54,580	0/0:15,1:16:36.85:0,37,325	0/0:11,0:12:20.83:0,21,175	1/1:12,11:25:4.20:163,4,0	0/1:5,12:17:7.11:102,0,7	1/1:5,14:19:41.53:282,42,0	0/1:6,10:16:18.42:152,0,18	0/1:11,1:12:4.78:5,0,74	0/0:11,0:11:26.90:0,27,231	0/0:19,1:24:27.16:0,27,347	0/0:6,0:13:15.60:0,16,81	0/0:10,0:21:30.26:0,30,173	1/1:3,14:16:35.61:243,36,0	0/1:7,11:18:19.17:135,0,19	0/1:7,2:9:16.42:16,0,42	1/1:6,9:16:28.74:191,29,0	0/1:4,2:6:14.58:15,0,22	0/0:14,1:15:3.44:0,3,171	0/0:13,0:18:32.70:0,33,276	0/0:6,0:6:12:0,12,107	0/1:11,2:15:2.45:2,0,235	1/1:2,1:15:26.27:98,26,0	1/1:11,2:32:38.42:135,38,0	1/1:0,0:10:20.37:59,20,0
chr10	22466194	.	G	GA	3023.88	PASS	AB=0.762;AC=18;AF=0.321;AN=56;BaseQRankSum=1.502;DP=472;FS=1.709;HRun=10;HaplotypeScore=57.7608;InbreedingCoeff=0.5260;MQ=76.75;MQ0=0;MQRankSum=-0.265;QD=12.65;ReadPosRankSum=-2.601;VQSLOD=2.7871;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:10:10.08:0,10,162	0/0:7,0:7:17.97:0,18,145	0/0:16,0:14:13.45:0,13,96	0/0:17,0:16:28.58:0,29,198	1/1:3,1:26:66.88:346,67,0	0/0:21,1:22:23.24:0,23,366	0/1:11,1:13:3.20:3,0,163	1/1:9,1:27:55.16:360,55,0	0/0:14,0:14:35.91:0,36,290	1/1:5,3:26:66.52:419,67,0	1/1:1,2:20:51.97:314,52,0	0/0:10,0:12:34.02:0,34,255	0/0:11,0:11:29.88:0,30,233	0/0:20,0:20:47.94:0,48,394	1/1:3,15:18:21.22:395,21,0	1/1:3,9:13:2.26:214,2,0	0/0:17,1:19:11.96:0,12,287	0/1:18,1:19:10.67:11,0,254	0/0:26,0:27:54.31:0,54,487	0/0:17,0:18:46.97:0,47,375	0/0:3,0:3:8.99:0,9,74	0/0:5,0:5:8.99:0,9,74	0/0:17,0:17:47.92:0,48,388	0/1:10,0:10:3.91:4,0,170	0/0:15,0:15:41.91:0,42,342	0/1:8,18:28:13.89:479,0,14	0/1:8,22:31:4.89:552,0,5	0/1:1,6:7:9.61:113,0,10
chr10	22466482	.	GA	G	1059.18	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=4.616;DP=527;FS=19.349;HRun=9;HaplotypeScore=85.2536;InbreedingCoeff=0.9803;MQ=84.64;MQ0=0;MQRankSum=-3.628;QD=23.54;ReadPosRankSum=0.519;VQSLOD=2.4245;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:54.15:0,54,614	0/0:7,0:7:18.04:0,18,198	0/0:20,0:20:23.42:0,23,345	0/0:14,0:15:19.47:0,19,218	0/0:28,0:28:69.19:0,69,784	0/0:26,0:26:60.17:0,60,683	0/0:14,0:14:42.12:0,42,485	0/0:28,0:28:63.15:0,63,701	0/0:13,0:13:36.11:0,36,415	0/0:21,0:21:60.17:0,60,683	0/0:21,0:21:54.16:0,54,623	0/0:16,0:16:45.13:0,45,518	0/0:14,0:14:36.11:0,36,414	0/0:16,0:16:48.13:0,48,546	1/1:0,24:24:69.04:632,69,0	1/1:1,20:21:60.03:549,60,0	0/0:15,0:15:45.12:0,45,510	0/0:23,0:23:60.18:0,60,692	0/0:10,0:10:24.07:0,24,277	0/0:18,0:18:51.14:0,51,580	0/0:6,0:6:15.03:0,15,162	0/0:7,0:7:21.06:0,21,242	0/0:13,0:13:36.10:0,36,406	0/0:28,0:28:81.23:0,81,925	0/0:18,0:17:45.13:0,45,518	0/0:28,0:28:81.23:0,81,926	0/0:40,0:40:99:0,111,1252	0/0:16,0:16:45.13:0,45,519
chr10	22467085	.	GCACA	G	1204.79	PASS	AB=0.888;AC=20;AF=0.385;AN=52;BaseQRankSum=4.581;DP=494;FS=0.726;HRun=0;HaplotypeScore=84.2310;InbreedingCoeff=0.4542;MQ=62.39;MQ0=15;MQRankSum=-1.715;QD=5.26;ReadPosRankSum=3.160;VQSLOD=1.6064;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:28,13:39:3:46,3,0	1/1:4,2:7:9.02:120,9,0	./.	./.	0/0:22,0:22:6.02:0,6,128	0/0:18,0:18:11.78:0,12,198	0/0:30,0:28:24.08:0,24,503	0/0:17,0:17:3.01:0,3,58	1/1:5,8:14:14.98:185,15,0	0/0:7,0:10:18.06:0,18,363	0/0:6,0:6:6.02:0,6,107	0/1:15,0:16:23.10:23,0,242	0/0:18,0:18:14.78:0,15,205	0/0:18,0:18:21.07:0,21,378	1/1:12,0:17:12.01:112,12,0	1/1:7,0:9:6.01:56,6,0	1/1:20,10:30:15.52:232,16,0	1/1:14,10:24:21.07:316,21,0	0/0:11,0:11:6:0,6,67	0/0:8,0:9:2.74:0,3,12	0/1:23,1:31:94.02:131,0,94	0/0:10,0:10:2.68:0,3,11	0/0:15,0:14:18.24:0,18,236	0/0:28,0:30:41.61:0,42,740	0/1:13,1:13:28.41:28,0,184	0/1:13,0:13:21.89:22,0,39	1/1:6,0:10:12.01:112,12,0	0/0:10,0:10:2.68:0,3,11
chr10	22467600	.	GAA	G	11747.34	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-5.580;DP=499;FS=0.000;HRun=11;HaplotypeScore=65.3964;InbreedingCoeff=0.8605;MQ=76.69;MQ0=6;MQRankSum=-3.699;QD=25.54;ReadPosRankSum=3.420;VQSLOD=4.8342;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,20:25:48.07:566,48,0	1/1:3,4:7:12.02:128,12,0	0/0:22,0:17:5.65:0,6,121	0/0:16,0:12:17.02:0,17,257	1/1:3,22:23:60.14:639,60,0	1/1:1,15:16:39.10:415,39,0	1/1:1,17:18:42.09:447,42,0	1/1:4,29:33:87.15:900,87,0	1/1:1,10:11:30.07:319,30,0	1/1:4,25:29:75.17:797,75,0	1/1:3,21:24:51.08:543,51,0	1/1:3,14:16:39.08:415,39,0	1/1:0,17:17:51.13:543,51,0	1/1:3,12:15:6.86:235,7,0	1/1:1,25:26:69.17:734,69,0	1/1:3,12:15:36.08:383,36,0	1/1:3,22:25:63.15:671,63,0	1/1:3,17:20:28.58:488,29,0	1/1:0,7:7:21.05:223,21,0	1/1:1,13:14:33.06:351,33,0	1/1:1,8:9:18.04:192,18,0	1/1:0,10:10:27.06:287,27,0	1/1:2,14:17:35.82:363,36,0	1/1:0,11:10:27.06:287,27,0	1/1:1,12:12:33.08:351,33,0	1/1:2,18:20:54.13:575,54,0	1/1:3,27:30:68.84:734,69,0	1/1:0,5:5:15.04:160,15,0
chr10	22467916	.	CA	C	957.95	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=1.975;DP=536;FS=1.436;HRun=4;HaplotypeScore=70.9835;InbreedingCoeff=0.9403;MQ=78.19;MQ0=0;MQRankSum=-2.196;QD=27.37;ReadPosRankSum=2.113;VQSLOD=3.1403;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:51,1:52:99:0,138,2065	0/0:2,0:2:6.02:0,6,84	0/0:19,0:18:16.18:0,16,494	0/0:21,0:21:54.56:0,55,709	0/0:25,0:25:66.22:0,66,918	0/0:23,0:23:66.21:0,66,907	0/0:17,0:17:48.16:0,48,672	0/0:28,0:28:81.26:0,81,1108	0/0:14,0:14:39.13:0,39,546	0/0:23,0:23:69.23:0,69,950	0/0:14,0:14:39.12:0,39,529	0/0:17,0:17:48.13:0,48,638	0/0:12,0:12:33.10:0,33,446	0/0:20,0:20:54.16:0,54,733	1/1:2,17:19:48.15:576,48,0	1/1:1,15:16:42.13:504,42,0	0/0:23,0:23:68.52:0,69,857	0/0:14,0:14:39.03:0,39,504	0/0:18,0:18:51.15:0,51,685	0/0:16,0:16:45.12:0,45,593	0/0:18,0:18:50.96:0,51,612	0/0:10,0:10:30.09:0,30,405	0/0:14,0:14:39.08:0,39,492	0/0:18,0:18:54.17:0,54,740	0/0:21,0:21:57.16:0,57,761	0/0:34,0:34:99:0,102,1413	0/0:21,0:21:60.19:0,60,824	0/0:7,0:7:21.07:0,21,294
chr10	22469081	.	AC	A	7454.32	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=16.016;DP=601;FS=6.679;HRun=2;HaplotypeScore=77.9857;InbreedingCoeff=0.9998;MQ=86.02;MQ0=0;MQRankSum=-1.063;QD=36.01;ReadPosRankSum=-1.051;VQSLOD=4.8090;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,23:23:51.17:662,51,0	0/0:15,0:15:42.14:0,42,629	0/0:18,0:18:42.05:0,42,556	0/0:20,0:20:57.15:0,57,812	0/0:34,0:34:99:0,102,1526	0/0:23,0:23:69.21:0,69,1012	0/0:20,0:20:60.19:0,60,875	1/1:0,32:32:96.29:1219,96,0	0/0:16,0:16:48.16:0,48,714	1/1:2,17:19:57.19:740,57,0	1/1:0,21:21:60.20:779,60,0	0/0:15,0:15:45.15:0,45,675	0/0:15,0:15:45.14:0,45,656	0/0:21,0:21:63.21:0,63,935	1/1:0,30:30:81.26:1052,81,0	1/1:0,22:22:63.16:799,63,0	0/0:27,0:27:81.27:0,81,1212	0/0:17,0:17:51.17:0,51,764	0/0:30,0:30:90.27:0,90,1325	0/0:28,0:28:81.27:0,81,1214	0/0:25,0:25:72.23:0,72,1058	0/0:15,0:15:42.14:0,42,619	0/0:20,0:20:57.19:0,57,849	0/0:12,0:12:36.12:0,36,539	0/0:23,0:23:69.23:0,69,1029	1/1:0,13:13:33.09:412,33,0	1/1:0,37:37:99:1402,108,0	1/1:0,10:10:30.10:389,30,0
chr10	22469159	.	TA	T	2622.13	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=9.752;DP=555;FS=0.000;HRun=8;HaplotypeScore=75.5515;InbreedingCoeff=0.9840;MQ=78.29;MQ0=0;MQRankSum=-1.358;QD=23.62;ReadPosRankSum=0.218;VQSLOD=4.0888;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:60.17:0,60,713	0/0:8,0:8:24.07:0,24,290	0/0:16,0:16:38.96:0,39,410	0/0:15,0:15:20.40:0,20,197	0/0:24,0:24:69.20:0,69,818	0/0:19,0:19:57.17:0,57,688	0/0:16,0:16:45.12:0,45,531	1/1:3,30:33:87.11:834,87,0	0/0:21,0:21:54.16:0,54,642	1/1:0,15:15:45.07:435,45,0	1/1:3,10:13:36.04:341,36,0	0/0:21,0:21:48.13:0,48,568	0/0:21,0:21:54.17:0,54,652	0/0:21,0:21:54.17:0,54,652	1/1:5,20:25:62.99:595,63,0	1/1:6,19:25:63.03:593,63,0	0/0:23,0:23:57.14:0,57,663	0/0:25,0:25:69.17:0,69,807	0/0:29,1:30:52.23:0,52,888	0/0:33,0:33:84.25:0,84,1003	0/0:8,0:8:24.07:0,24,290	0/0:14,0:14:39.12:0,39,471	0/0:21,0:21:57.17:0,57,679	0/0:4,0:4:9.03:0,9,109	0/0:25,0:25:63.18:0,63,748	0/0:22,1:23:34.23:0,34,676	0/0:24,0:24:63.19:0,63,760	0/0:8,0:8:24.07:0,24,289
chr10	22469461	.	A	AC	3860.70	PASS	AB=0.994;AC=21;AF=0.375;AN=56;BaseQRankSum=7.309;DP=692;FS=2.565;HRun=7;HaplotypeScore=87.6146;InbreedingCoeff=0.6358;MQ=73.12;MQ0=0;MQRankSum=-0.225;QD=12.45;ReadPosRankSum=5.027;VQSLOD=2.5921;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,23:30:42.13:507,42,0	0/0:15,0:15:36.06:0,36,348	0/0:37,1:35:56.81:0,57,528	0/0:33,0:26:17.92:0,18,336	1/1:3,0:24:60.23:304,60,0	0/1:21,0:21:1.04:114,0,1	1/1:22,0:22:37.74:152,38,0	0/0:36,0:36:84.09:0,84,800	0/0:29,0:29:81.09:0,81,770	0/0:28,0:28:81.11:0,81,771	0/0:25,0:25:66.05:0,66,619	0/1:19,0:19:38.51:92,0,39	0/1:34,1:35:23.44:236,0,23	1/1:34,0:34:32.60:242,33,0	1/1:4,31:35:84.26:1015,84,0	1/1:4,26:30:42.23:802,42,0	0/0:27,0:27:72.07:0,72,682	0/0:18,0:18:54.08:0,54,517	0/0:29,0:29:66.01:0,66,612	0/0:29,0:29:87.09:0,87,819	0/0:12,0:12:29.06:0,29,260	0/1:8,0:8:10.86:41,0,11	0/1:18,0:18:17.41:88,0,17	1/1:20,0:20:47.31:189,47,0	1/1:14,0:14:3.38:80,3,0	0/0:25,0:25:66.09:0,66,634	0/0:30,0:30:75.09:0,75,716	0/0:7,0:7:21.03:0,21,203
chr10	22469468	.	C	CA	6131.85	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-7.202;DP=664;FS=7.755;HRun=7;HaplotypeScore=79.0105;InbreedingCoeff=0.9876;MQ=72.67;MQ0=0;MQRankSum=1.616;QD=22.63;ReadPosRankSum=5.186;VQSLOD=4.7400;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:23:22.47:159,22,0	0/0:13,0:13:39.05:0,39,371	0/0:35,0:31:50.83:0,51,447	0/0:32,0:26:31.39:0,31,339	0/0:23,0:23:55.13:0,55,236	1/1:2,18:20:48.15:575,48,0	1/1:0,19:19:45.10:522,45,0	0/0:30,0:30:81.05:0,81,758	0/0:29,0:29:81.10:0,81,769	0/0:30,0:30:81.11:0,81,771	0/0:25,0:25:66.05:0,66,617	1/1:3,14:18:45:517,45,0	1/1:6,29:35:90.28:1074,90,0	1/1:3,31:34:96.13:1128,96,0	1/1:36,0:36:8.01:217,8,0	1/1:25,0:25:34.18:221,34,0	0/0:26,0:26:75.08:0,75,710	0/0:20,0:20:54.02:0,54,506	0/0:24,0:24:66.09:0,66,632	0/0:32,0:32:84.11:0,84,803	0/0:13,0:13:26.24:0,26,238	1/1:2,7:10:16.45:233,16,0	1/1:2,15:18:41.96:481,42,0	1/1:0,20:20:54.17:646,54,0	1/1:1,12:13:30.09:359,30,0	0/0:24,0:24:69.09:0,69,659	0/0:26,0:26:75.10:0,75,717	0/0:11,0:11:32.95:0,33,289
chr10	22469732	.	C	CA	588.13	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-4.135;DP=662;FS=0.000;HRun=4;HaplotypeScore=63.2959;InbreedingCoeff=0.9954;MQ=82.19;MQ0=0;MQRankSum=-2.779;QD=30.95;ReadPosRankSum=0.646;VQSLOD=3.8162;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,120,1339	0/0:20,0:20:57.16:0,57,645	0/0:22,0:22:57.12:0,57,620	0/0:22,0:22:63.04:0,63,686	1/1:2,17:19:51.16:683,51,0	0/0:28,0:28:78.22:0,78,884	0/0:29,0:29:75.20:0,75,841	0/0:36,0:36:96.27:0,96,1089	0/0:8,0:8:21.06:0,21,238	0/0:30,0:30:84.22:0,84,937	0/0:28,0:28:78.19:0,78,866	0/0:31,0:31:87.23:0,87,977	0/0:21,0:21:57.13:0,57,634	0/0:18,0:18:48.13:0,48,545	0/0:26,0:26:75.21:0,75,851	0/0:24,0:24:72.19:0,72,806	0/0:22,0:22:63.18:0,63,715	0/0:23,0:23:64.73:0,65,719	0/0:27,0:27:69.19:0,69,783	0/0:23,0:23:60.17:0,60,681	0/0:25,0:25:72.20:0,72,817	0/0:14,0:14:42.12:0,42,476	0/0:25,0:25:72.16:0,72,786	0/0:21,0:21:47.54:0,48,655	0/0:17,0:17:51.15:0,51,578	0/0:27,0:27:81.23:0,81,919	0/0:22,0:22:66.17:0,66,738	0/0:11,0:11:30.09:0,30,340
chr10	22470136	.	AT	A	543.15	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=7.809;DP=644;FS=3.909;HRun=8;HaplotypeScore=65.5830;InbreedingCoeff=0.7046;MQ=73.42;MQ0=0;MQRankSum=0.356;QD=12.63;ReadPosRankSum=-0.413;VQSLOD=2.9562;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:63.15:0,63,745	0/0:15,0:15:42.12:0,42,495	0/1:16,0:16:4.46:4,0,226	0/0:7,1:7:14.25:0,14,139	1/1:4,22:26:66.09:637,66,0	0/0:27,0:27:72.21:0,72,859	0/0:15,0:15:45.12:0,45,531	0/0:30,0:30:81.23:0,81,958	0/0:18,0:18:42.13:0,42,507	0/0:32,0:32:84.25:0,84,1005	0/0:28,0:28:78.24:0,78,942	0/0:23,0:23:60.18:0,60,725	0/0:38,0:38:99:0,99,1173	0/0:19,0:19:51.14:0,51,603	0/0:33,0:33:93.28:0,93,1112	0/0:27,0:27:75.22:0,75,895	0/0:30,0:29:78.24:0,78,942	0/0:18,0:18:48.15:0,48,580	0/0:20,0:20:54.17:0,54,652	0/0:27,0:27:78.24:0,78,942	0/0:8,0:8:21.06:0,21,254	0/0:32,0:32:86.85:0,87,1022	0/0:18,0:18:45.14:0,45,544	0/0:22,0:21:54.17:0,54,652	0/0:24,0:24:69.20:0,69,823	0/0:30,0:30:81.25:0,81,976	0/0:23,0:23:63.18:0,63,750	0/0:14,0:14:36.11:0,36,435
chr10	22470302	.	CA	C	315.30	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.749;DP=742;FS=0.000;HRun=4;HaplotypeScore=103.0730;InbreedingCoeff=0.9698;MQ=86.70;MQ0=1;MQRankSum=-4.265;QD=11.26;ReadPosRankSum=-2.245;VQSLOD=0.8807;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,135,1887	0/0:11,0:11:33.11:0,33,460	0/0:20,0:20:45.04:0,45,598	0/0:31,0:30:70.59:0,71,1011	1/1:5,23:28:57.98:410,58,0	0/0:27,0:27:78.26:0,78,1091	0/0:29,0:29:81.26:0,81,1115	0/0:36,0:36:99:0,102,1382	0/0:20,0:20:57.19:0,57,793	0/0:29,0:29:87.24:0,87,1179	0/0:11,0:11:33.11:0,33,462	0/0:30,0:30:81.25:0,81,1099	0/0:30,0:30:87.27:0,87,1184	0/0:32,0:32:96.30:0,96,1308	0/0:35,0:35:96.32:0,96,1345	0/0:27,0:27:81.26:0,81,1119	0/0:38,0:38:99:0,111,1545	0/0:19,0:19:54.18:0,54,750	0/0:28,0:28:81.26:0,81,1115	0/0:34,0:34:99:0,99,1351	0/0:22,0:22:63.19:0,63,864	0/0:27,0:27:75.24:0,75,1033	0/0:18,0:18:48.15:0,48,656	0/0:33,0:33:96.26:0,96,1302	0/0:15,0:15:42.14:0,42,578	0/0:30,0:30:81.27:0,81,1125	0/0:32,0:32:96.30:0,96,1322	0/0:4,0:4:12.04:0,12,168
chr10	22470307	.	GCA	G	708.22	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=8.354;DP=739;FS=0.000;HRun=0;HaplotypeScore=118.5458;InbreedingCoeff=0.9698;MQ=85.42;MQ0=1;MQRankSum=-4.042;QD=24.42;ReadPosRankSum=-3.078;VQSLOD=3.6574;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,150,2826	0/0:12,0:12:36.11:0,36,694	0/0:21,0:21:58.43:0,58,1122	0/0:27,0:26:34.42:0,34,1312	1/1:6,23:29:72.14:803,72,0	0/0:28,0:28:81.28:0,81,1620	0/0:29,0:29:84.27:0,84,1657	0/0:38,0:38:99:0,111,2180	0/0:20,0:20:60.21:0,60,1217	0/0:30,0:30:90.31:0,90,1829	0/0:11,0:11:33.11:0,33,658	0/0:27,0:27:75.24:0,75,1486	0/0:31,0:31:90.30:0,90,1768	0/0:30,0:30:84.29:0,84,1706	0/0:32,0:32:96.33:0,96,1915	0/0:27,0:27:81.28:0,81,1605	0/0:37,0:37:99:0,111,2163	0/0:19,0:19:54.18:0,54,1077	0/0:28,0:28:84.21:0,84,1559	0/0:32,0:32:96.29:0,96,1808	0/0:21,0:21:63.22:0,63,1279	0/0:25,0:25:75.20:0,75,1368	0/0:18,0:18:51.17:0,51,1024	0/0:36,0:36:99:0,105,2018	0/0:15,0:15:42.14:0,42,841	0/0:29,0:29:87.29:0,87,1725	0/0:33,0:33:99:0,99,1858	0/0:4,0:4:12.04:0,12,244
chr10	22470332	.	G	GA	9135.54	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-15.865;DP=747;FS=7.950;HRun=2;HaplotypeScore=80.3424;InbreedingCoeff=0.9985;MQ=86.84;MQ0=1;MQRankSum=-4.793;QD=38.55;ReadPosRankSum=5.598;VQSLOD=4.8331;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,147,1821	0/0:12,0:12:33.10:0,33,408	0/0:23,0:23:63.04:0,63,727	0/0:29,0:28:78.09:0,78,906	0/0:30,0:30:66.17:0,66,816	1/1:0,27:27:78.26:1123,78,0	1/1:1,32:33:87.29:1253,87,0	0/0:38,0:38:99:0,108,1339	0/0:26,0:26:75.22:0,75,917	0/0:30,0:30:87.27:0,87,1069	0/0:9,0:9:27.08:0,27,335	1/1:1,23:24:63.21:907,63,0	1/1:1,27:28:75.25:1080,75,0	1/1:1,28:30:87.29:1248,87,0	0/0:34,0:34:99:0,99,1201	0/0:24,0:24:72.23:0,72,892	0/0:37,0:37:99:0,111,1362	0/0:20,0:20:60.17:0,60,727	0/0:25,0:25:69.22:0,69,855	0/0:29,0:29:84.26:0,84,1039	0/0:28,0:28:72.21:0,72,879	1/1:1,22:23:63.21:906,63,0	1/1:0,16:16:45.15:648,45,0	1/1:3,33:36:90.30:1296,90,0	1/1:2,18:20:48.15:674,48,0	0/0:28,0:28:78.24:0,78,957	0/0:32,0:32:96.29:0,96,1176	0/0:6,0:6:18.06:0,18,223
chr10	22472544	.	G	GA	7267.18	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-1.456;DP=687;FS=6.531;HRun=8;HaplotypeScore=106.6989;InbreedingCoeff=0.9995;MQ=85.59;MQ0=0;MQRankSum=-6.283;QD=27.74;ReadPosRankSum=-0.446;VQSLOD=3.9549;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,24:27:69.16:781,69,0	0/0:13,0:13:32.99:0,33,297	0/0:24,0:26:44.76:0,45,385	0/0:24,0:24:36.28:0,36,303	0/0:32,0:32:75.02:0,75,686	0/0:24,0:24:60.01:0,60,544	0/0:24,0:24:57.02:0,57,522	1/1:13,30:43:99:1201,105,0	0/0:17,0:17:39:0,39,351	1/1:2,25:27:78.23:898,78,0	1/1:6,17:23:39.07:433,39,0	0/0:19,0:19:54.03:0,54,494	0/0:23,0:23:57:0,57,516	0/0:20,0:20:54.01:0,54,489	1/1:7,19:26:60.11:665,60,0	1/1:10,21:31:66.20:761,66,0	0/0:25,0:25:66.02:0,66,599	0/0:19,0:19:42.01:0,42,384	0/0:16,0:16:36.02:0,36,329	0/0:29,0:29:78.03:0,78,714	0/0:15,0:15:36.01:0,36,330	0/0:28,0:28:75.02:0,75,682	0/0:29,0:29:69.03:0,69,632	0/0:13,0:13:24.01:0,24,220	0/0:29,0:29:81.03:0,81,737	1/1:7,27:34:65.81:1010,66,0	1/1:9,30:39:99:1150,102,0	1/1:1,11:12:33.06:367,33,0
chr10	22472580	.	A	AT	16162.22	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-5.346;DP=686;FS=0.332;HRun=6;HaplotypeScore=80.4420;InbreedingCoeff=0.9796;MQ=72.08;MQ0=0;MQRankSum=-4.580;QD=32.26;ReadPosRankSum=1.968;VQSLOD=4.9046;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,21:25:66.14:776,66,0	0/0:13,0:13:39.09:0,39,398	0/0:15,0:15:41.48:0,41,366	0/0:12,0:12:10.80:0,11,198	1/1:1,25:26:66.21:830,66,0	1/1:5,23:28:63.20:793,63,0	1/1:1,16:17:36.12:453,36,0	1/1:8,25:33:84.26:1040,84,0	0/0:18,0:18:51.10:0,51,512	1/1:6,27:33:84.27:1048,84,0	1/1:4,20:24:60.18:742,60,0	1/1:1,18:19:48.15:604,48,0	1/1:3,20:23:60.19:752,60,0	1/1:4,17:21:48.15:604,48,0	1/1:0,24:24:72.23:905,72,0	1/1:6,22:28:66.21:830,66,0	0/0:33,0:33:84.14:0,84,846	0/0:18,1:19:7.43:0,7,391	0/0:17,0:17:39.08:0,39,398	0/0:44,0:44:99:0,120,1217	0/0:14,0:14:42.10:0,42,429	1/1:4,28:32:81.17:982,81,0	1/1:0,31:32:87.28:1093,87,0	1/1:0,9:9:27.09:340,27,0	1/1:5,36:41:99:1321,105,0	1/1:1,39:40:99:1469,117,0	1/1:5,35:40:99:1355,108,0	1/1:0,6:6:18.06:226,18,0
chr10	22474547	.	C	CT	11139.09	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-13.042;DP=793;FS=2.509;HRun=0;HaplotypeScore=78.4058;InbreedingCoeff=0.9935;MQ=58.53;MQ0=22;MQRankSum=-1.670;QD=41.56;ReadPosRankSum=0.988;VQSLOD=5.5249;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,42:42:99:1724,108,0	0/0:8,0:8:24.07:0,24,318	0/0:31,0:8:18.05:0,18,223	0/0:45,0:18:45.13:0,45,579	0/0:18,0:18:54.17:0,54,738	0/0:18,0:18:51.16:0,51,690	0/0:30,0:30:81.24:0,81,1110	1/1:0,31:23:66.19:971,66,0	0/0:27,0:27:78.26:0,78,1088	1/1:1,26:26:78.27:1245,78,0	1/1:0,18:18:48.16:767,48,0	0/0:33,0:33:93.27:0,93,1276	0/0:37,0:37:99:0,105,1428	0/0:37,0:37:99:0,105,1439	1/1:2,45:47:99:2041,129,0	1/1:0,48:48:99:1984,126,0	0/0:36,0:36:96.25:0,96,1318	0/0:18,0:18:48.16:0,48,670	0/0:31,0:18:54.17:0,54,737	0/0:16,0:16:42.14:0,42,587	0/0:51,0:50:99:0,129,1797	0/0:19,0:19:57.19:0,57,797	0/0:20,0:19:48.07:0,48,628	0/0:38,0:38:99:0,105,1467	0/0:11,0:11:33.11:0,33,461	1/1:0,31:31:93.32:1477,93,0	1/1:0,20:20:48.12:739,48,0	1/1:0,4:4:12.04:192,12,0
chr10	22474781	.	A	AC	112.70	PASS	AC=2;AF=0.037;AN=54;BaseQRankSum=1.170;DP=311;FS=20.065;HRun=7;HaplotypeScore=35.7522;InbreedingCoeff=0.6725;MQ=50.21;MQ0=29;MQRankSum=-3.122;QD=4.90;ReadPosRankSum=-1.365;VQSLOD=-0.6248;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:18,5:14:20.94:204,21,0	0/0:1,0:1:3:0,3,29	0/0:17,0:5:11.99:0,12,107	0/0:15,0:9:23.91:0,24,216	0/0:11,0:11:27.04:0,27,261	0/0:12,0:12:33.05:0,33,319	0/0:16,0:13:36.01:0,36,338	0/0:18,0:7:21.03:0,21,203	0/0:8,0:8:24.03:0,24,227	0/0:7,0:7:18.03:0,18,174	0/0:6,0:6:15.02:0,15,145	0/0:16,0:16:33.04:0,33,316	0/0:13,0:13:33.05:0,33,318	0/0:6,0:6:9.01:0,9,87	0/0:16,0:17:32.05:0,32,284	0/0:9,0:9:18.03:0,18,174	0/0:12,0:11:30.05:0,30,290	0/0:10,0:8:21.03:0,21,203	0/0:12,0:8:24.04:0,24,232	0/0:9,0:8:18.03:0,18,174	0/0:19,0:19:45.03:0,45,427	0/0:5,0:4:9.01:0,9,87	0/0:7,0:6:18.03:0,18,174	0/0:17,0:14:33:0,33,309	0/0:4,0:4:9.01:0,9,87	0/0:7,0:6:15.02:0,15,145	0/0:13,0:13:33.05:0,33,319	./.
chr10	22474821	.	TG	T	1090.48	PASS	AC=16;AF=0.320;AN=50;BaseQRankSum=3.850;DP=226;FS=0.000;HRun=6;HaplotypeScore=18.1218;InbreedingCoeff=0.7955;MQ=40.63;MQ0=58;MQRankSum=-0.882;QD=12.98;ReadPosRankSum=0.941;VQSLOD=0.4863;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,5:5:15.04:161,15,0	0/0:1,0:1:3.01:0,3,37	./.	./.	0/0:10,0:10:27.09:0,27,355	0/0:7,0:6:12.04:0,12,155	0/0:13,0:11:24.03:0,24,284	1/1:26,3:3:6.01:58,6,0	0/0:6,0:6:12.04:0,12,157	1/1:3,7:8:21.05:224,21,0	1/1:0,3:3:6.02:64,6,0	0/0:8,0:8:12.04:0,12,158	0/0:14,0:11:24.08:0,24,314	0/0:8,0:7:12.04:0,12,158	1/1:4,8:11:18.03:184,18,0	1/1:0,5:5:9.02:97,9,0	0/0:4,0:4:9.03:0,9,118	0/0:5,0:3:9.03:0,9,118	0/0:8,0:1:3.01:0,3,39	0/0:9,0:8:21.07:0,21,276	0/0:7,0:6:12.04:0,12,155	0/0:3,0:3:9.03:0,9,118	0/0:4,0:2:6.02:0,6,79	0/0:10,0:9:21.03:0,21,257	0/0:2,0:2:6.02:0,6,75	1/1:1,6:6:18.05:193,18,0	1/1:0,11:10:27.07:290,27,0	./.
chr10	22474968	.	T	TA	546.27	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.732;DP=492;FS=12.764;HRun=6;HaplotypeScore=44.7146;InbreedingCoeff=0.9631;MQ=67.53;MQ0=1;MQRankSum=0.356;QD=30.35;ReadPosRankSum=-0.822;VQSLOD=2.7546;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:63.14:0,63,643	0/0:7,0:7:15.03:0,15,153	0/0:10,0:10:21.04:0,21,210	0/0:10,0:8:18:0,18,172	1/1:1,17:18:51.16:641,51,0	0/0:15,0:15:42.08:0,42,422	0/0:14,0:14:42.07:0,42,419	0/0:39,0:39:99:0,108,1094	0/0:21,0:21:63.14:0,63,642	0/0:19,0:19:57.11:0,57,574	0/0:20,0:20:57.13:0,57,581	0/0:21,0:21:57.09:0,57,571	0/0:28,0:28:75.15:0,75,757	0/0:16,0:16:39.08:0,39,397	0/0:20,0:20:54.12:0,54,550	0/0:24,0:24:63.11:0,63,633	0/0:27,0:27:75.17:0,75,765	0/0:15,0:15:33.05:0,33,329	0/0:11,0:11:33.05:0,33,328	0/0:18,0:18:54.12:0,54,551	0/0:12,0:12:33.06:0,33,330	0/0:7,0:7:21.05:0,21,214	0/0:26,0:26:72.15:0,72,727	0/0:13,0:13:33.07:0,33,336	0/0:9,0:9:27.06:0,27,275	0/0:15,0:15:39.09:0,39,398	0/0:23,0:23:57.12:0,57,581	0/0:8,0:8:21.05:0,21,214
chr10	22475487	.	TA	T	755.82	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=8.152;DP=600;FS=3.812;HRun=5;HaplotypeScore=58.3031;InbreedingCoeff=0.9680;MQ=83.58;MQ0=0;MQRankSum=-3.364;QD=26.99;ReadPosRankSum=-0.330;VQSLOD=3.3706;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:63.19:0,63,840	0/0:4,0:4:12.04:0,12,164	0/0:19,0:19:51.12:0,51,624	0/0:15,0:15:36.11:0,36,471	1/1:2,26:28:75.21:851,75,0	0/0:18,0:18:51.17:0,51,698	0/0:16,0:16:45.15:0,45,616	0/0:35,0:35:96.31:0,96,1299	0/0:24,0:24:66.22:0,66,903	0/0:25,0:25:69.22:0,69,920	0/0:17,0:17:48.16:0,48,657	0/0:21,0:21:60.19:0,60,804	0/0:30,0:30:90.30:0,90,1228	0/0:23,0:23:63.21:0,63,862	0/0:36,0:36:99:0,108,1462	0/0:23,0:23:69.23:0,69,943	0/0:25,0:25:75.19:0,75,985	0/0:19,0:19:54.18:0,54,739	0/0:20,0:20:54.18:0,54,739	0/0:30,0:30:84.28:0,84,1148	0/0:14,0:14:42.14:0,42,574	0/0:18,0:18:51.17:0,51,698	0/0:11,0:11:33.11:0,33,451	0/0:21,0:21:63.19:0,63,831	0/0:22,0:22:66.22:0,66,903	0/0:25,0:25:69.22:0,69,930	0/0:31,0:31:87.29:0,87,1187	0/0:8,0:8:24.08:0,24,328
chr10	22477061	.	G	GA	794.84	PASS	AB=0.944;AC=4;AF=0.071;AN=56;BaseQRankSum=-4.466;DP=601;FS=0.000;HRun=9;HaplotypeScore=65.0408;InbreedingCoeff=0.5189;MQ=74.24;MQ0=1;MQRankSum=-0.178;QD=12.42;ReadPosRankSum=0.287;VQSLOD=3.0617;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,28:30:58.17:870,58,0	0/0:10,0:10:26.99:0,27,234	0/0:25,0:23:13.70:0,14,221	0/1:18,0:15:1.35:1,0,88	0/0:21,0:21:53.99:0,54,468	0/0:22,0:21:53.98:0,54,469	0/0:21,0:21:55.28:0,55,468	0/0:36,0:36:99:0,102,872	0/0:16,0:16:35.98:0,36,312	0/0:24,1:25:29.83:0,30,488	0/0:23,0:24:71.02:0,71,605	0/0:18,0:18:44.97:0,45,387	0/0:23,0:23:47.95:0,48,413	0/0:30,0:33:83.85:0,84,691	0/0:23,0:23:53.98:0,54,468	0/0:17,2:19:20.81:0,21,410	0/0:22,1:23:29.80:0,30,488	0/1:14,2:16:30.46:30,0,210	0/0:19,0:19:30.94:0,31,324	0/0:27,0:27:25.84:0,26,523	0/0:19,0:19:47.98:0,48,414	0/0:20,0:20:50.98:0,51,442	0/0:18,0:18:53.99:0,54,469	0/0:35,0:35:89.98:0,90,781	0/0:15,0:15:44.99:0,45,390	0/0:13,0:14:35.01:0,35,290	0/0:19,0:19:53.95:0,54,460	0/0:11,0:10:26.98:0,27,234
chr10	22477216	.	GT	G	579.86	PASS	AB=0.889;AC=7;AF=0.125;AN=56;BaseQRankSum=10.039;DP=557;FS=6.598;HRun=11;HaplotypeScore=62.2519;InbreedingCoeff=0.7119;MQ=74.20;MQ0=0;MQRankSum=0.796;QD=5.98;ReadPosRankSum=2.529;VQSLOD=1.3942;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,25:29:58.73:490,59,0	0/0:6,0:7:7.45:0,7,148	0/0:13,2:12:1.31:0,1,115	0/0:13,0:11:10.06:0,10,62	0/0:20,2:22:10.58:0,11,458	0/0:19,2:23:13.56:0,14,510	0/0:22,1:23:16.09:0,16,481	0/0:39,1:41:68.39:0,68,889	0/0:14,0:15:26.20:0,26,298	0/0:19,1:20:48.11:0,48,505	0/0:11,1:16:14.20:0,14,316	0/0:16,1:17:20.75:0,21,411	0/1:20,3:24:18.72:19,0,405	0/0:17,2:20:17.30:0,17,374	1/1:3,0:19:30.55:88,31,0	1/1:0,0:25:44.82:130,45,0	0/0:20,0:21:33.70:0,34,446	0/0:20,0:20:51.02:0,51,510	0/0:14,0:14:27.05:0,27,276	0/0:26,0:26:66.16:0,66,697	0/0:11,0:11:30.53:0,31,313	0/0:14,1:15:20.53:0,21,410	0/0:17,1:19:16.61:0,17,403	0/0:15,2:17:11.50:0,11,327	0/0:23,1:25:29.58:0,30,464	0/0:17,0:18:29.91:0,30,301	0/0:25,1:26:47.45:0,47,663	0/0:15,0:14:39.07:0,39,404
chr10	22477701	.	TAAGA	T	1904.83	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=11.657;DP=640;FS=1.123;HRun=0;HaplotypeScore=115.7725;InbreedingCoeff=0.9606;MQ=84.18;MQ0=0;MQRankSum=-10.142;QD=36.63;ReadPosRankSum=1.357;VQSLOD=3.7136;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:69.22:0,69,1910	0/0:8,0:8:24.08:0,24,696	0/0:18,0:18:54.18:0,54,1456	0/0:22,0:22:50.36:0,50,1339	0/0:25,0:25:75.25:0,75,2110	0/0:29,0:29:87.30:0,87,2452	0/0:26,0:26:78.24:0,78,2043	0/0:25,0:25:75.26:0,75,2175	0/0:22,0:22:66.23:0,66,1913	0/0:24,0:24:72.25:0,72,2087	0/0:25,0:25:75.25:0,75,2113	0/0:19,0:19:57.16:0,57,1534	0/0:41,0:41:99:0,123,3438	0/0:25,0:25:75.24:0,75,2038	0/0:24,0:24:72.23:0,72,1990	0/0:31,0:31:93.31:0,93,2637	0/0:20,0:20:60.21:0,60,1755	0/0:10,0:10:30.10:0,30,870	0/0:19,0:19:57.20:0,57,1612	0/0:28,0:28:84.29:0,84,2372	0/0:28,0:28:81.26:0,81,2236	0/0:20,0:20:60.18:0,60,1617	0/0:18,0:18:54.18:0,54,1497	0/0:34,0:34:99:0,102,2914	0/0:24,0:24:72.25:0,72,2087	1/1:2,19:21:60.17:832,60,0	1/1:2,27:29:87.26:1127,87,0	1/1:0,2:2:6.02:81,6,0
chr10	22477707	.	A	AT	1363.82	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=11.994;DP=649;FS=4.952;HRun=0;HaplotypeScore=83.1020;InbreedingCoeff=0.9608;MQ=83.57;MQ0=0;MQRankSum=-11.601;QD=22.36;ReadPosRankSum=0.737;VQSLOD=5.1978;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:69.23:0,69,964	0/0:9,0:9:27.09:0,27,378	0/0:21,0:21:57.17:0,57,765	0/0:19,0:19:54.02:0,54,677	0/0:24,0:24:72.24:0,72,1007	0/0:28,0:28:84.28:0,84,1166	0/0:23,0:23:69.23:0,69,964	0/0:27,0:27:81.27:0,81,1133	0/0:22,0:22:66.22:0,66,923	0/0:25,0:25:75.23:0,75,1004	0/0:24,0:24:72.24:0,72,1007	0/0:18,0:18:51.16:0,51,696	0/0:38,0:38:99:0,114,1594	0/0:25,0:25:72.23:0,72,989	0/0:23,0:23:66.22:0,66,923	0/0:32,0:32:96.31:0,96,1325	0/0:23,0:23:66.22:0,66,923	0/0:10,0:10:30.10:0,30,420	0/0:20,0:20:60.19:0,60,821	0/0:26,0:26:78.26:0,78,1090	0/0:28,0:28:78.26:0,78,1091	0/0:18,0:18:54.18:0,54,755	0/0:20,0:20:60.19:0,60,823	0/0:32,0:32:96.32:0,96,1343	0/0:29,0:29:87.28:0,87,1193	1/1:5,19:24:63.09:656,63,0	1/1:5,28:33:92.80:791,93,0	1/1:2,2:4:6:51,6,0
chr10	22477850	.	T	TGG	1826.74	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-5.604;DP=553;FS=22.134;HRun=7;HaplotypeScore=78.6841;InbreedingCoeff=0.9936;MQ=85.94;MQ0=0;MQRankSum=-3.828;QD=35.13;ReadPosRankSum=0.787;VQSLOD=2.2189;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,12:12:30.10:492,30,0	0/0:8,0:8:18.04:0,18,199	0/0:25,0:25:57.14:0,57,643	0/0:20,0:20:50.76:0,51,507	0/0:26,0:26:66.19:0,66,769	0/0:33,0:33:90.26:0,90,1048	0/0:21,0:21:51.15:0,51,594	0/0:34,0:33:81.21:0,81,935	0/0:17,0:17:45.11:0,45,514	0/0:22,0:22:57.16:0,57,664	0/0:12,0:12:33.08:0,33,375	0/0:21,0:21:54.15:0,54,629	0/0:30,0:30:84.23:0,84,968	0/0:19,0:19:51.15:0,51,594	1/1:1,19:22:45.15:739,45,0	1/1:1,17:18:45.15:738,45,0	0/0:11,0:11:33.08:0,33,373	0/0:13,0:13:33.05:0,33,370	0/0:22,0:23:65.92:0,66,737	0/0:18,0:18:48.14:0,48,559	0/0:13,0:13:33.03:0,33,367	0/0:17,0:17:48.14:0,48,559	0/0:20,0:20:60.17:0,60,688	0/0:15,0:15:36.07:0,36,397	0/0:14,0:14:30.07:0,30,349	0/0:23,0:23:44.89:0,45,222	0/0:34,0:34:45.27:0,45,149	0/0:12,0:12:18.26:0,18,54
chr10	22477852	.	G	GA	2465.28	PASS	AB=0.521;AC=5;AF=0.089;AN=56;BaseQRankSum=7.765;DP=552;FS=3.025;HRun=0;HaplotypeScore=63.1672;InbreedingCoeff=0.8087;MQ=87.29;MQ0=0;MQRankSum=-3.836;QD=35.22;ReadPosRankSum=1.330;VQSLOD=3.3524;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:28.71:0,29,147	0/0:8,0:8:21.04:0,21,273	0/0:26,0:26:72.20:0,72,924	0/0:21,0:21:62.82:0,63,752	0/0:25,0:25:75.22:0,75,998	0/0:34,0:34:99:0,102,1359	0/0:18,0:18:54.16:0,54,736	0/0:34,0:33:99:0,102,1321	0/0:17,0:17:51.15:0,51,680	0/0:21,0:21:63.20:0,63,852	0/0:12,0:12:36.11:0,36,486	0/0:20,0:20:60.18:0,60,805	0/0:29,0:29:87.28:0,87,1198	0/0:19,0:19:54.17:0,54,737	0/0:23,0:23:49.48:0,49,286	0/0:19,0:19:49.36:0,49,283	0/0:12,0:12:36.09:0,36,483	0/0:13,0:13:39.07:0,39,503	0/0:24,0:24:69.10:0,69,937	0/0:17,0:17:48.16:0,48,670	0/0:11,0:11:33.11:0,33,456	0/0:17,0:17:51.16:0,51,696	0/0:20,0:20:60.20:0,60,832	0/0:16,0:16:45.11:0,45,578	0/0:14,0:14:39.09:0,39,495	0/1:2,23:25:8.65:893,0,9	1/1:0,35:35:84.28:1255,84,0	1/1:0,10:10:30.10:448,30,0
chr10	22478201	.	T	TTG	1004.36	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=0.567;DP=551;FS=0.641;HRun=0;HaplotypeScore=113.2549;InbreedingCoeff=0.7762;MQ=69.92;MQ0=5;MQRankSum=0.063;QD=8.30;ReadPosRankSum=0.536;VQSLOD=3.1573;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:16,2:31:46.76:416,47,0	0/0:4,0:4:9.03:0,9,107	0/1:35,0:18:10.61:24,0,11	0/0:30,0:18:13.70:0,14,140	0/0:21,0:21:26.91:0,27,299	0/0:22,0:24:41.96:0,42,478	0/0:25,0:25:42.07:0,42,473	0/0:22,0:24:38.22:0,38,367	0/0:11,0:11:21.05:0,21,239	0/0:23,0:23:51.02:0,51,549	0/0:12,0:12:20.88:0,21,243	0/0:18,0:18:36.10:0,36,419	0/0:27,0:27:61.58:0,62,699	0/0:14,0:15:26.91:0,27,300	1/1:3,9:12:2.21:268,2,0	1/1:7,8:15:24.06:359,24,0	0/0:27,0:29:66.71:0,67,723	0/0:13,0:14:24.04:0,24,240	0/0:17,0:17:32.95:0,33,364	0/0:15,0:15:31.96:0,32,307	0/0:19,0:20:41.93:0,42,453	0/0:21,0:20:22.08:0,22,336	0/0:17,0:18:33.10:0,33,391	0/0:28,0:29:66:0,66,740	0/0:18,0:18:39.10:0,39,451	1/1:14,0:14:9.87:66,10,0	0/0:15,0:15:5.58:0,6,27	1/1:12,0:12:7.03:32,7,0
chr10	22478222	.	CGT	C	1434.92	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=1.733;DP=616;FS=1.200;HRun=0;HaplotypeScore=132.7446;InbreedingCoeff=0.6666;MQ=50.51;MQ0=16;MQRankSum=-1.196;QD=14.49;ReadPosRankSum=0.113;VQSLOD=3.7483;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:33:55.68:0,56,803	0/0:5,0:5:9.03:0,9,149	0/0:51,0:6:9.02:0,9,119	0/0:45,0:9:11.99:0,12,169	0/0:25,0:25:29.36:0,29,431	0/0:22,0:22:44.60:0,45,657	0/0:22,0:22:36.12:0,36,604	1/1:6,14:20:16.41:505,16,0	0/0:14,0:14:41.33:0,41,578	1/1:8,18:26:66.06:796,66,0	1/1:5,8:13:21.05:252,21,0	0/0:19,0:19:45.06:0,45,730	0/0:29,0:29:75.29:0,75,1081	0/0:19,0:18:38.52:0,39,539	0/0:11,0:11:26.12:0,26,405	0/0:17,0:17:38.15:0,38,543	0/0:32,0:32:50.77:0,51,837	0/0:13,0:13:38.25:0,38,491	0/0:21,0:19:51.60:0,52,753	0/0:16,0:16:32.60:0,33,484	0/0:25,0:25:54.55:0,55,814	0/0:25,0:24:54.14:0,54,791	0/0:16,0:16:27.09:0,27,454	0/0:35,0:34:74.68:0,75,1124	0/0:21,0:21:45.14:0,45,714	0/1:16,0:16:12.51:13,0,50	0/1:16,0:16:11.84:19,0,12	0/1:8,0:8:0.84:1,0,1
chr10	22478233	.	GCGCA	G	890.43	PASS	AB=0.976;AC=9;AF=0.161;AN=56;BaseQRankSum=6.913;DP=594;FS=8.701;HRun=0;HaplotypeScore=152.5637;InbreedingCoeff=0.5407;MQ=49.07;MQ0=16;MQRankSum=-5.770;QD=8.82;ReadPosRankSum=-0.090;VQSLOD=2.5522;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,1:33:55.17:0,55,1247	0/0:5,1:6:12.04:0,12,278	0/0:40,0:4:8.41:0,8,150	0/0:39,0:5:11.94:0,12,152	0/0:22,2:25:29.96:0,30,498	0/0:20,0:20:36.12:0,36,679	0/0:19,0:19:38.17:0,38,689	0/0:23,0:23:64.30:0,64,847	0/0:13,0:13:39.01:0,39,853	0/0:26,0:26:75.23:0,75,1079	0/0:13,0:13:24.07:0,24,350	0/0:23,0:23:49.79:0,50,791	0/1:25,0:25:8.12:8,0,948	0/0:22,0:21:44.80:0,45,739	0/0:13,0:13:29.11:0,29,615	0/0:16,0:16:38.12:0,38,800	0/1:31,0:31:17.20:17,0,1228	0/1:12,1:12:23.60:24,0,713	0/0:24,0:21:60.20:0,60,1323	0/0:18,0:18:38.39:0,38,732	0/0:24,0:24:57.12:0,57,1251	0/0:25,1:25:24.07:0,24,473	0/0:16,0:16:22.13:0,22,342	0/0:32,1:32:38.41:0,38,1085	0/0:21,0:21:47.15:0,47,780	1/1:2,3:12:7.19:474,7,0	1/1:5,5:15:24.07:368,24,0	1/1:2,1:5:7.95:146,8,0
chr10	22478235	.	GCA	G	536.88	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=7.960;DP=593;FS=4.301;HRun=0;HaplotypeScore=137.4044;InbreedingCoeff=0.9138;MQ=48.88;MQ0=15;MQRankSum=-5.332;QD=17.32;ReadPosRankSum=0.159;VQSLOD=3.4618;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:55.04:0,55,1050	0/0:6,0:6:12.04:0,12,227	0/0:37,1:4:8.82:0,9,162	0/0:38,0:5:12.02:0,12,162	0/0:26,0:26:29.46:0,29,516	0/0:20,0:20:45.15:0,45,787	0/0:19,0:19:38.72:0,39,712	0/0:25,1:26:17.56:0,18,295	0/0:14,0:14:39.12:0,39,718	0/0:27,0:27:24.51:0,25,235	0/0:12,0:12:10.87:0,11,75	0/0:23,0:23:54.08:0,54,956	0/0:25,0:25:42.30:0,42,1086	0/0:21,0:20:42.12:0,42,735	0/0:14,0:14:32.10:0,32,544	0/0:17,0:17:41.12:0,41,712	0/0:29,0:30:23.59:0,24,1093	0/0:13,0:12:16.04:0,16,617	0/0:23,0:21:60.55:0,61,1031	0/0:18,0:18:38.81:0,39,616	0/0:23,0:23:54.15:0,54,1010	0/0:24,0:23:51.16:0,51,786	0/0:15,1:16:30.07:0,30,464	0/0:32,0:31:71.90:0,72,1225	0/0:21,0:21:48.14:0,48,819	1/1:11,0:11:32.97:337,33,0	1/1:13,2:15:23.73:228,24,0	1/1:3,2:5:9.03:108,9,0
chr10	22478239	.	GCA	G	527.72	PASS	AB=0.935;AC=9;AF=0.161;AN=56;BaseQRankSum=6.912;DP=576;FS=6.150;HRun=0;HaplotypeScore=132.4407;InbreedingCoeff=0.3311;MQ=48.56;MQ0=14;MQRankSum=-4.351;QD=5.55;ReadPosRankSum=-1.433;VQSLOD=2.7001;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,1:31:14.07:0,14,707	0/1:6,1:7:8.91:9,0,163	0/0:39,0:3:5.81:0,6,106	0/0:36,0:2:6.02:0,6,96	0/0:22,2:24:23.42:0,23,300	0/0:20,0:20:42.12:0,42,587	0/0:17,1:18:4.29:0,4,469	0/0:25,1:26:22.33:0,22,811	0/0:13,0:13:33.04:0,33,452	0/0:25,1:26:22.55:0,23,708	0/0:13,0:13:21.02:0,21,287	0/0:21,1:22:51:0,51,651	0/0:25,0:25:46.79:0,47,816	0/0:21,0:20:42.11:0,42,599	0/0:13,0:13:23.17:0,23,353	0/0:16,0:16:37.41:0,37,447	0/1:27,0:27:3.42:3,0,709	0/1:14,0:13:7.56:8,0,402	0/0:25,0:23:21.24:0,21,874	0/1:16,0:16:2.27:2,0,356	0/0:22,0:22:51.05:0,51,746	0/0:23,0:22:48:0,48,566	0/0:15,1:17:27:0,27,322	0/0:31,0:30:64.32:0,64,845	0/0:20,0:20:45.14:0,45,632	0/1:9,3:12:20.92:316,0,21	1/1:7,7:14:23.80:232,24,0	1/1:3,2:5:9:93,9,0
chr10	22478241	.	ATGTG	A	2749.76	PASS	AB=0.913;AC=19;AF=0.365;AN=52;BaseQRankSum=-4.840;DP=597;FS=5.635;HRun=0;HaplotypeScore=147.8248;InbreedingCoeff=0.6975;MQ=48.51;MQ0=14;MQRankSum=1.871;QD=11.55;ReadPosRankSum=3.115;VQSLOD=3.0329;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:32:39.60:0,40,723	0/0:7,0:8:9.03:0,9,149	./.	./.	0/0:19,0:28:8:0,8,69	1/1:9,9:19:18.06:287,18,0	0/1:11,5:17:27.68:132,0,28	0/0:24,0:26:35.83:0,36,558	0/0:7,0:14:24.08:0,24,448	0/0:18,0:26:48.15:0,48,861	0/0:9,0:18:9.03:0,9,168	1/1:12,7:20:18.06:287,18,0	1/1:17,8:25:26.90:419,27,0	1/1:12,9:21:18.06:287,18,0	0/0:9,0:13:14.08:0,14,228	0/0:8,0:16:23.11:0,23,393	0/1:15,0:26:4.71:5,0,577	0/0:12,0:15:27.07:0,27,458	0/0:23,0:23:25.90:0,26,497	0/0:6,0:16:30.10:0,30,520	0/0:15,0:27:21.06:0,21,379	1/1:6,16:22:33.11:527,33,0	1/1:6,11:17:14.81:239,15,0	1/1:18,12:30:5.90:407,6,0	1/1:9,10:21:21.02:315,21,0	0/0:13,0:13:17.43:0,17,175	0/1:17,0:17:34.13:38,0,34	0/0:5,0:5:6.43:0,6,16
chr10	22478314	.	GA	G	963.82	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=3.128;DP=504;FS=4.123;HRun=7;HaplotypeScore=77.7692;InbreedingCoeff=0.9751;MQ=82.37;MQ0=0;MQRankSum=0.728;QD=20.51;ReadPosRankSum=1.271;VQSLOD=3.3328;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:96.17:0,96,1139	0/0:10,0:10:30.10:0,30,377	0/0:29,1:26:65.80:0,66,688	0/0:35,1:29:50.03:0,50,632	0/0:18,0:18:48.14:0,48,592	0/0:24,0:24:63.09:0,63,746	0/0:15,0:15:39.12:0,39,490	0/0:25,0:25:63.20:0,63,793	0/0:9,0:9:24.08:0,24,302	0/0:13,0:13:39.12:0,39,490	0/0:24,0:24:66.21:0,66,830	0/0:15,0:15:42.11:0,42,503	0/0:15,0:15:39.10:0,39,466	0/0:17,0:17:45.14:0,45,554	0/0:8,0:8:21.07:0,21,264	0/0:9,0:9:24.04:0,24,283	0/0:23,0:23:60.17:0,60,740	0/0:17,0:17:48.11:0,48,586	0/0:16,0:16:42.13:0,42,518	0/0:18,0:18:48.14:0,48,592	0/0:16,0:16:30.08:0,30,361	0/0:11,0:11:27.09:0,27,340	0/0:18,1:19:48.15:0,48,593	0/0:18,0:18:36.12:0,36,453	0/0:16,0:16:39.12:0,39,491	1/1:5,20:25:57.12:581,57,0	1/1:2,17:19:42.09:428,42,0	1/1:0,3:3:9.02:92,9,0
chr10	22478541	.	AG	A	1140.14	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=2.588;DP=489;FS=2.786;HRun=9;HaplotypeScore=64.5403;InbreedingCoeff=0.8199;MQ=81.74;MQ0=1;MQRankSum=-3.034;QD=20.00;ReadPosRankSum=1.901;VQSLOD=4.3838;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:93.24:0,93,1052	0/0:5,0:5:12.04:0,12,138	0/0:21,0:21:53.34:0,53,541	0/0:12,0:12:21.02:0,21,219	0/0:25,0:25:39.10:0,39,439	0/0:5,0:17:17.39:0,17,87	0/0:5,0:22:39.83:0,40,204	0/0:26,0:26:48.09:0,48,520	0/0:17,0:17:48.14:0,48,552	0/0:20,0:20:48.13:0,48,539	0/0:19,0:19:36.11:0,36,415	0/0:7,0:15:11.68:0,12,73	0/0:5,0:14:5.68:0,6,29	0/0:4,0:16:19.81:0,20,101	0/0:2,0:13:25.57:0,26,130	0/0:2,0:8:17.04:0,17,87	0/0:20,0:20:54.14:0,54,612	0/0:19,0:18:51.15:0,51,589	0/0:20,0:22:62.99:0,63,679	0/0:7,0:7:12.04:0,12,138	0/0:25,0:25:63.17:0,63,717	0/0:1,0:1:2.84:0,3,14	0/0:4,0:8:2.84:0,3,14	0/0:7,0:23:39.80:0,40,202	0/0:9,0:17:20.04:0,20,113	1/1:7,20:27:63:567,63,0	1/1:2,18:20:51.03:467,51,0	1/1:0,10:10:27.01:247,27,0
chr10	22479497	.	T	TG	2378.44	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=4.805;DP=711;FS=6.991;HRun=0;HaplotypeScore=70.5857;InbreedingCoeff=0.9767;MQ=86.81;MQ0=0;MQRankSum=-2.264;QD=41.01;ReadPosRankSum=1.652;VQSLOD=4.3071;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,138,1913	0/0:7,0:7:21.07:0,21,294	0/0:22,0:22:63.18:0,63,858	0/0:27,0:27:70.89:0,71,848	0/0:35,0:35:99:0,102,1355	0/0:17,0:17:51.17:0,51,712	0/0:28,0:28:84.28:0,84,1174	0/0:24,0:24:72.23:0,72,979	0/0:28,0:28:84.27:0,84,1156	0/0:21,0:21:60.20:0,60,839	0/0:17,0:17:51.16:0,51,696	0/0:16,0:16:48.14:0,48,641	0/0:41,0:41:99:0,111,1533	0/0:35,0:35:99:0,102,1424	0/0:34,0:34:99:0,102,1410	0/0:27,0:27:81.27:0,81,1130	0/0:30,0:30:90.26:0,90,1220	0/0:9,0:9:24.07:0,24,335	0/0:20,0:20:60.19:0,60,820	0/0:34,0:34:93.29:0,93,1269	0/0:33,0:33:99:0,99,1364	0/0:26,0:26:78.26:0,78,1089	0/0:32,0:32:96.31:0,96,1321	0/0:22,0:22:63.19:0,63,862	0/0:21,0:21:60.18:0,60,819	1/1:2,27:29:81.26:1270,81,0	1/1:0,25:25:69.24:1102,69,0	1/1:1,3:4:9.03:144,9,0
chr10	22479871	.	C	CT	3508.88	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-9.790;DP=659;FS=0.000;HRun=9;HaplotypeScore=61.9278;InbreedingCoeff=0.9746;MQ=81.33;MQ0=0;MQRankSum=-2.226;QD=29.00;ReadPosRankSum=2.522;VQSLOD=3.2712;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:28:74:0,74,627	0/0:7,0:7:17.99:0,18,156	0/0:19,0:20:6.48:0,6,190	0/0:16,0:16:25.13:0,25,344	0/0:46,0:46:99:0,123,1068	0/0:22,0:22:53.97:0,54,465	0/0:15,0:15:41.99:0,42,365	0/0:35,1:35:33.83:0,34,534	0/0:22,0:22:59.98:0,60,521	0/0:34,1:35:62.79:0,63,772	0/0:28,0:28:74.97:0,75,651	0/0:25,0:25:71.98:0,72,625	0/0:23,0:23:56.99:0,57,495	0/0:20,1:21:23.79:0,24,432	1/1:3,27:30:58.17:870,58,0	1/1:3,18:21:51.14:564,51,0	0/0:18,0:18:41.98:0,42,365	0/0:13,0:13:35.99:0,36,312	0/0:25,0:25:59.97:0,60,521	0/0:31,0:31:86.98:0,87,755	0/0:8,0:8:24:0,24,208	0/0:21,0:21:53.97:0,54,469	0/0:25,0:25:56.97:0,57,495	0/0:17,0:17:41.03:0,41,345	0/0:35,0:36:91.76:0,92,774	1/1:3,25:28:75.20:830,75,0	1/1:2,28:28:81.22:896,81,0	1/1:1,10:12:29.12:349,29,0
chr10	22480138	.	CA	C	2640.05	PASS	AB=0.900;AC=11;AF=0.196;AN=56;BaseQRankSum=10.215;DP=685;FS=3.330;HRun=9;HaplotypeScore=69.1245;InbreedingCoeff=0.8602;MQ=80.33;MQ0=0;MQRankSum=-0.587;QD=18.86;ReadPosRankSum=0.573;VQSLOD=3.9197;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:1,0:35:82.34:0,82,417	0/0:7,0:7:21.06:0,21,242	0/1:16,2:18:18.85:19,0,284	0/0:16,0:17:4.60:0,5,252	0/0:36,2:38:56.39:0,56,1156	0/0:27,1:29:59.63:0,60,922	0/0:30,0:30:84.25:0,84,969	0/0:28,0:28:50.75:0,51,830	0/0:28,0:28:84.20:0,84,936	0/0:31,0:32:92.28:0,92,1025	0/0:17,0:17:45.08:0,45,495	0/0:25,0:25:69.20:0,69,796	0/0:28,0:28:81.22:0,81,917	0/0:21,0:21:60.18:0,60,692	1/1:3,17:20:45.02:412,45,0	1/1:1,24:26:71.07:638,71,0	0/0:21,1:22:38.68:0,39,675	0/0:21,0:21:57.17:0,57,658	0/0:22,0:22:60.18:0,60,692	0/0:33,0:33:90.26:0,90,1029	0/0:12,0:12:36.11:0,36,415	0/0:18,0:18:51.15:0,51,589	0/0:27,0:27:72.21:0,72,827	0/0:29,0:29:75.20:0,75,853	0/0:26,0:26:72.21:0,72,831	1/1:3,27:30:49.43:707,49,0	1/1:5,31:36:90.05:823,90,0	1/1:1,9:10:24.01:220,24,0
chr10	22482253	.	GT	G	2225.79	PASS	AB=0.845;AC=14;AF=0.250;AN=56;BaseQRankSum=10.283;DP=457;FS=6.972;HRun=11;HaplotypeScore=47.9831;InbreedingCoeff=0.7364;MQ=70.43;MQ0=2;MQRankSum=0.880;QD=15.35;ReadPosRankSum=0.258;VQSLOD=3.7576;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:32.95:0,33,334	0/0:4,0:4:9.02:0,9,96	0/0:9,0:7:3.95:0,4,31	0/0:6,1:8:3.01:0,3,32	0/0:25,1:26:47.52:0,48,698	0/0:25,0:25:60.11:0,60,628	0/0:7,0:7:12.03:0,12,128	1/1:11,23:34:68.51:551,69,0	0/0:10,0:10:27:0,27,271	1/1:1,17:18:47.93:394,48,0	1/1:0,14:15:40.98:326,41,0	0/0:13,1:15:14.31:0,14,342	0/0:18,0:19:56.95:0,57,580	0/0:10,0:10:18.04:0,18,191	0/0:17,0:19:38.03:0,38,404	0/0:11,1:12:8.45:0,8,295	0/0:29,2:31:31.88:0,32,738	0/0:12,0:12:27.04:0,27,278	0/0:15,0:15:42.06:0,42,429	0/0:21,0:21:48.10:0,48,498	0/1:4,1:5:9.80:10,0,83	0/0:10,0:10:21.52:0,22,219	0/0:18,0:18:45.11:0,45,480	0/1:8,2:10:19.21:19,0,226	0/0:30,0:30:84.21:0,84,896	1/1:6,18:24:47.88:389,48,0	1/1:0,27:27:68.91:566,69,0	1/1:3,6:11:22.05:160,22,0
chr10	22482354	.	C	CTAATCTCCCACCAA	20748.49	PASS	AB=0.692;AC=11;AF=0.196;AN=56;BaseQRankSum=-4.171;DP=519;FS=3.455;HRun=0;HaplotypeScore=193.6758;InbreedingCoeff=0.8581;MQ=77.28;MQ0=0;MQRankSum=-15.219;QD=163.37;ReadPosRankSum=-0.410;VQSLOD=5.1008;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,8:12:33.03:1916,33,0	0/0:2,0:2:6.02:0,6,217	0/0:12,0:12:20.92:0,21,472	0/0:17,0:16:32.12:0,32,1090	0/0:32,0:32:90.31:0,90,3603	0/0:22,0:22:60.17:0,60,2162	0/0:12,0:12:33.11:0,33,1315	0/0:35,0:35:96.30:0,96,3230	0/0:16,0:16:45.15:0,45,1795	0/0:25,0:25:72.25:0,72,2815	0/0:24,0:24:69.24:0,69,2757	0/0:26,0:26:72.23:0,72,2901	0/0:19,0:19:51.18:0,51,1990	0/0:20,0:20:57.18:0,57,2271	1/1:9,16:27:75.26:4703,75,0	1/1:7,11:21:54.19:3431,54,0	0/0:26,0:26:57.95:0,58,2358	0/0:5,0:5:15.05:0,15,593	0/0:17,0:17:51.18:0,51,2012	0/0:18,0:18:54.17:0,54,1946	0/0:11,0:11:33.11:0,33,1282	0/0:11,0:11:33.11:0,33,1376	0/0:16,0:16:45.15:0,45,1863	0/0:16,0:16:48.16:0,48,1869	0/0:10,0:10:30.09:0,30,1075	0/1:15,12:27:46.89:3862,0,47	1/1:19,14:34:93.32:5854,93,0	1/1:1,4:5:15.05:983,15,0
chr10	22482384	.	GA	G	1364.35	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.502;DP=503;FS=0.000;HRun=9;HaplotypeScore=87.4958;InbreedingCoeff=0.9671;MQ=67.46;MQ0=0;MQRankSum=-5.869;QD=22.01;ReadPosRankSum=1.774;VQSLOD=4.2113;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:27:0,27,282	0/0:5,0:5:15.04:0,15,173	0/0:18,0:18:38.46:0,38,361	0/0:13,0:11:15.40:0,15,141	0/0:35,0:36:99:0,105,1173	0/0:21,0:21:57.14:0,57,644	0/0:13,0:13:39.12:0,39,450	0/0:22,0:22:48.13:0,48,539	0/0:16,0:16:45.12:0,45,509	0/0:31,0:31:72.21:0,72,831	0/0:20,0:20:60.17:0,60,684	0/0:22,0:22:60.18:0,60,693	0/0:19,0:19:57.14:0,57,638	0/0:20,0:21:60.01:0,60,672	0/0:24,0:23:60.10:0,60,663	0/0:19,0:19:54.16:0,54,623	0/0:25,0:25:75.14:0,75,831	0/0:12,0:12:33.06:0,33,366	0/0:11,0:11:33.08:0,33,363	0/0:18,0:18:45.13:0,45,519	0/0:7,0:7:18.05:0,18,208	0/0:8,0:8:18.04:0,18,199	0/0:15,0:15:36.11:0,36,415	0/0:16,0:16:41.79:0,42,461	0/0:17,0:17:42.12:0,42,485	1/1:3,14:17:10.40:350,10,0	1/1:2,28:30:81.04:741,81,0	1/1:0,15:15:45.02:412,45,0
chr10	22483637	.	CA	C	7266.25	PASS	AB=0.929;AC=53;AF=0.946;AN=56;BaseQRankSum=-0.740;DP=560;FS=19.053;HRun=9;HaplotypeScore=88.4126;InbreedingCoeff=0.6757;MQ=79.69;MQ0=3;MQRankSum=-7.210;QD=13.48;ReadPosRankSum=4.501;VQSLOD=3.1732;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,17:20:48.02:439,48,0	1/1:1,15:16:36.01:330,36,0	0/0:21,0:21:51.14:0,51,573	0/1:12,1:12:9.04:9,0,123	1/1:4,27:31:72.01:659,72,0	1/1:1,0:21:36.67:108,37,0	1/1:1,0:13:20.37:60,20,0	1/1:6,24:31:71.06:638,71,0	1/1:3,19:22:57.03:522,57,0	1/1:3,21:24:63.01:573,63,0	1/1:2,11:13:27.01:247,27,0	1/1:0,0:17:32.59:96,33,0	1/1:2,0:16:26.48:78,26,0	1/1:1,0:16:28.52:84,29,0	1/1:2,13:15:39.01:357,39,0	1/1:8,19:27:57.02:522,57,0	1/1:2,16:18:42.02:384,42,0	1/1:4,8:12:24:220,24,0	1/1:1,13:14:39.02:357,39,0	1/1:5,21:26:63.03:577,63,0	1/1:1,4:5:12.01:110,12,0	1/1:6,0:24:36.66:108,37,0	1/1:4,0:24:36.66:107,37,0	1/1:1,0:12:20.37:60,20,0	1/1:1,0:30:52.96:156,53,0	1/1:3,3:30:54.76:217,55,0	1/1:2,0:32:55:162,55,0	1/1:0,0:15:30.56:90,31,0
chr10	22484165	.	G	GGA	5276.03	PASS	AB=1.000;AC=20;AF=0.357;AN=56;BaseQRankSum=3.077;DP=666;FS=2.980;HRun=0;HaplotypeScore=103.5393;InbreedingCoeff=0.6625;MQ=52.43;MQ0=28;MQRankSum=4.456;QD=18.78;ReadPosRankSum=1.675;VQSLOD=4.7493;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:30.06:0,30,351	0/0:7,0:7:18.06:0,18,223	0/1:53,0:7:18.08:18,0,31	0/0:90,0:19:8.73:0,9,104	0/0:26,0:25:53.81:0,54,738	1/1:19,3:22:45.08:657,45,0	1/1:14,0:14:29.88:458,30,0	0/0:31,0:31:59.60:0,60,685	0/0:22,0:22:57.17:0,57,694	0/0:13,0:12:15.04:0,15,181	0/0:22,0:22:45.14:0,45,557	0/1:21,0:21:26.60:525,0,27	1/1:14,5:19:41.92:708,42,0	1/1:20,2:22:42.13:647,42,0	0/1:19,0:18:10.86:11,0,97	0/1:30,0:30:28.02:28,0,258	0/0:19,0:19:40.34:0,40,487	0/0:8,0:8:21.54:0,22,260	0/0:16,0:14:27.05:0,27,304	0/0:20,0:21:57.01:0,57,674	0/0:19,0:19:49.40:0,49,596	1/1:16,4:19:27.06:393,27,0	1/1:21,0:20:4.95:574,5,0	1/1:22,3:24:48.11:718,48,0	1/1:14,1:15:36.11:539,36,0	0/0:25,0:25:63.19:0,63,761	0/0:24,0:24:60.15:0,60,715	0/0:22,0:20:45.09:0,45,511
chr10	22484192	.	CAG	C	6601.93	PASS	AB=0.964;AC=32;AF=0.571;AN=56;BaseQRankSum=7.594;DP=629;FS=4.096;HRun=0;HaplotypeScore=136.7103;InbreedingCoeff=0.8437;MQ=56.98;MQ0=19;MQRankSum=1.712;QD=20.13;ReadPosRankSum=0.213;VQSLOD=5.2698;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:24.05:0,24,386	0/0:8,0:8:21.07:0,21,340	0/0:45,0:13:16.18:0,16,230	0/0:78,1:17:17.16:0,17,209	1/1:12,17:29:54.49:788,54,0	1/1:15,10:25:51.14:619,51,0	1/1:16,2:18:42.59:509,43,0	1/1:8,16:24:48.10:545,48,0	0/0:23,0:23:48.15:0,48,758	1/1:7,7:13:39.03:453,39,0	1/1:13,14:28:41.66:541,42,0	1/1:11,2:13:30.08:355,30,0	1/1:14,5:19:41.97:480,42,0	1/1:15,1:17:30.07:341,30,0	1/1:7,9:16:12.31:150,12,0	1/1:11,12:23:25.62:337,26,0	0/0:23,0:22:56.59:0,57,851	0/0:9,0:9:15.05:0,15,247	0/1:12,1:13:26.08:26,0,321	0/1:20,0:20:18.17:18,0,642	0/0:32,0:32:84.25:0,84,1285	1/1:14,3:16:27.07:324,27,0	1/1:18,1:19:42:473,42,0	1/1:18,0:18:36.09:428,36,0	1/1:11,4:15:18.99:213,19,0	0/0:19,0:19:57.14:0,57,862	0/0:27,0:27:51.17:0,51,814	0/0:20,0:18:30.04:0,30,428
chr10	22484206	.	GAC	G	1791.48	PASS	AB=0.986;AC=19;AF=0.339;AN=56;BaseQRankSum=10.761;DP=634;FS=7.159;HRun=0;HaplotypeScore=164.3000;InbreedingCoeff=0.0445;MQ=59.32;MQ0=14;MQRankSum=1.398;QD=6.14;ReadPosRankSum=5.384;VQSLOD=2.5818;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:19.82:0,20,404	0/0:8,0:8:24.05:0,24,389	0/0:48,0:15:23.49:0,23,412	0/0:78,0:26:25.50:0,25,325	0/1:30,1:31:28.33:297,0,28	0/1:25,0:24:33.26:167,0,33	0/1:22,0:22:53.85:120,0,54	0/1:21,0:21:81.35:122,0,81	0/0:19,0:19:53.81:0,54,874	0/1:13,2:15:18.45:176,0,18	1/1:24,3:27:19.90:196,20,0	0/1:15,0:15:63.80:102,0,64	0/1:20,0:20:83.76:122,0,84	1/1:13,0:13:1.80:79,2,0	0/1:16,0:16:29.99:58,0,30	0/1:22,0:22:48.91:126,0,49	0/0:25,0:24:47.74:0,48,1035	0/0:7,0:7:18.02:0,18,313	0/0:13,0:13:22.94:0,23,425	0/0:23,0:23:35.32:0,35,883	0/0:30,0:30:89.91:0,90,1552	0/1:16,0:16:26.81:73,0,27	1/1:18,1:19:1.38:148,1,0	1/1:15,0:15:10.13:123,10,0	0/1:15,0:15:6.96:53,0,7	0/0:21,0:21:60.03:0,60,941	0/0:29,0:29:62.96:0,63,972	0/0:19,0:17:28.33:0,28,424
chr10	22484229	.	AGT	A	1718.26	PASS	AB=0.933;AC=25;AF=0.446;AN=56;BaseQRankSum=-0.164;DP=618;FS=9.081;HRun=0;HaplotypeScore=160.1066;InbreedingCoeff=-0.2085;MQ=58.25;MQ0=17;MQRankSum=0.935;QD=4.08;ReadPosRankSum=2.748;VQSLOD=2.3059;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:17.18:0,17,135	0/1:4,3:7:54.60:55,0,78	0/0:55,0:19:17.94:0,18,119	0/1:71,0:26:15.59:16,0,44	0/0:18,0:33:52.90:0,53,518	0/1:23,0:23:97.38:97,0,162	0/1:18,0:18:86.13:86,0,163	0/0:27,0:26:41.77:0,42,414	0/1:17,0:16:59.43:59,0,189	0/0:21,0:21:31.28:0,31,416	0/0:24,0:24:14.83:0,15,204	0/1:17,0:18:36.43:36,0,139	0/1:17,1:18:57.44:57,0,236	0/1:14,0:14:27.37:27,0,172	0/0:15,0:16:11.69:0,12,42	0/1:19,1:21:54.48:71,0,54	0/1:20,1:21:54.81:55,0,260	1/1:4,2:6:12.84:111,13,0	0/1:11,0:11:34.93:35,0,60	0/1:21,0:21:77:77,0,165	0/1:29,2:32:99:190,0,148	0/1:15,0:15:88.91:89,0,131	0/1:17,1:18:66.61:67,0,192	0/1:11,0:10:0.48:0,0,148	0/1:7,11:18:16.67:229,0,17	1/1:18,0:18:32.84:197,33,0	1/1:27,0:27:45.38:227,45,0	1/1:14,0:14:20.15:112,20,0
chr10	22484249	.	T	TGA	868.96	PASS	AB=0.886;AC=7;AF=0.125;AN=56;BaseQRankSum=5.954;DP=650;FS=16.630;HRun=0;HaplotypeScore=161.9233;InbreedingCoeff=0.4810;MQ=50.05;MQ0=20;MQRankSum=-1.022;QD=7.24;ReadPosRankSum=0.661;VQSLOD=2.5669;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:19:4.66:38,5,0	0/0:7,0:7:17.99:0,18,188	0/0:61,0:14:21.64:0,22,351	0/0:60,0:19:41.44:0,41,393	0/1:32,0:31:99:168,0,194	0/0:28,0:28:66.53:0,67,760	0/0:18,0:18:48.12:0,48,617	0/0:33,0:31:78.52:0,79,611	0/0:19,0:18:54.06:0,54,655	0/0:25,0:25:57.79:0,58,559	0/1:24,0:24:8.30:8,0,137	0/0:16,0:16:44.99:0,45,555	0/0:22,0:22:66.08:0,66,828	0/0:17,0:17:45.04:0,45,538	1/1:7,13:19:20.89:331,21,0	0/1:12,13:25:9.20:455,0,9	0/0:21,0:21:57.08:0,57,724	0/0:5,0:5:14.95:0,15,134	0/0:12,0:11:27.98:0,28,335	0/0:21,0:21:60.10:0,60,741	0/0:28,0:28:78.01:0,78,848	0/0:18,0:18:47.56:0,48,532	0/0:23,0:23:54.05:0,54,661	0/0:11,0:10:24.08:0,24,352	0/0:20,0:20:38.88:0,39,353	0/0:20,0:21:53.52:0,54,427	0/0:27,0:28:47.61:0,48,427	0/0:14,0:14:20.97:0,21,191
chr10	22484251	.	TGTGTGAGA	T	2751.60	PASS	AB=0.769;AC=6;AF=0.107;AN=56;BaseQRankSum=-0.120;DP=641;FS=6.595;HRun=0;HaplotypeScore=206.8278;InbreedingCoeff=0.5829;MQ=51.18;MQ0=21;MQRankSum=-2.659;QD=31.27;ReadPosRankSum=-0.984;VQSLOD=2.3700;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:17.52:0,18,480	0/0:7,0:7:18.06:0,18,557	0/0:60,0:14:40.02:0,40,870	0/0:58,0:17:41.18:0,41,800	0/0:32,0:31:68.37:0,68,2105	0/0:28,0:28:62.37:0,62,1922	0/0:18,0:18:29.89:0,30,1149	0/0:33,0:31:87.29:0,87,2021	0/0:18,0:17:45.13:0,45,1357	0/0:25,0:25:67.71:0,68,1829	0/0:24,0:24:44.26:0,44,748	0/0:17,0:17:45.10:0,45,1206	0/0:22,0:22:59.95:0,60,1770	0/0:16,0:16:48.16:0,48,1445	0/0:20,0:19:23.09:0,23,505	0/1:24,0:25:94.64:95,0,798	0/0:21,0:21:8.07:0,8,1583	0/0:5,0:5:10.80:0,11,259	0/0:12,0:11:21.66:0,22,619	0/0:21,0:21:54.09:0,54,1519	0/0:28,0:28:72.09:0,72,1901	0/0:17,0:17:41.63:0,42,1180	0/0:21,0:21:54.16:0,54,1542	0/0:11,0:10:18.74:0,19,769	0/0:19,0:20:10.79:0,11,894	1/1:1,20:21:57.12:1000,57,0	1/1:1,27:28:47.84:1377,48,0	0/1:2,12:14:96.73:416,0,97
chr10	22484255	.	T	TGAGAGA	3889.52	PASS	AB=0.881;AC=13;AF=0.232;AN=56;BaseQRankSum=-3.599;DP=657;FS=4.721;HRun=0;HaplotypeScore=195.4411;InbreedingCoeff=0.6524;MQ=54.57;MQ0=20;MQRankSum=-0.756;QD=20.91;ReadPosRankSum=-5.250;VQSLOD=2.2312;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,1:21:17.65:412,18,0	0/1:8,0:8:7.95:8,0,205	0/0:58,0:16:22.64:0,23,449	0/0:55,0:16:7.56:0,8,335	0/0:33,0:32:50.94:0,51,662	0/0:28,0:29:24.33:0,24,489	0/0:19,0:19:26.43:0,26,393	1/1:35,0:33:51.58:1040,52,0	0/0:17,0:17:14.06:0,14,489	1/1:10,17:30:51.16:1243,51,0	0/1:12,10:27:31.41:288,0,31	0/1:18,0:18:5.57:6,0,419	0/0:23,0:23:31.35:0,31,717	0/0:16,0:16:44.97:0,45,566	1/1:21,0:20:23.66:319,24,0	1/1:26,0:26:43.06:574,43,0	0/0:21,0:21:29.12:0,29,730	0/0:5,0:5:5.98:0,6,105	0/0:12,0:11:26.96:0,27,321	0/0:20,0:20:42.02:0,42,564	0/0:29,0:29:1.03:0,1,556	0/0:16,0:16:31.79:0,32,379	0/0:23,0:23:25.75:0,26,634	0/0:12,0:11:21.03:0,21,327	0/0:18,0:20:40.08:0,40,720	0/0:21,0:21:30.99:0,31,448	0/0:28,0:28:48.16:0,48,669	0/0:14,0:14:13.46:0,13,207
chr10	22484857	.	G	GA	1199.43	PASS	AB=0.565;AC=5;AF=0.089;AN=56;BaseQRankSum=9.034;DP=442;FS=4.079;HRun=5;HaplotypeScore=60.9614;InbreedingCoeff=0.7763;MQ=56.55;MQ0=7;MQRankSum=0.667;QD=22.63;ReadPosRankSum=-1.047;VQSLOD=2.4926;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:19.02:0,19,198	0/0:8,0:8:24.06:0,24,257	0/0:16,0:6:15.03:0,15,154	0/0:5,0:2:6.02:0,6,64	0/0:26,0:25:63.16:0,63,677	0/0:12,0:12:33.05:0,33,354	0/0:9,0:8:24.06:0,24,258	0/0:39,0:39:74.63:0,75,367	0/0:11,0:11:24.06:0,24,258	0/0:26,0:26:62.41:0,62,298	0/0:18,0:17:31.37:0,31,156	0/0:10,0:10:30.07:0,30,316	0/0:16,0:16:42.10:0,42,451	0/0:13,0:13:39.10:0,39,419	0/0:15,0:13:14.01:0,14,33	0/0:12,0:12:16.59:0,17,66	0/0:30,0:30:75.14:0,75,790	0/0:23,0:21:53.30:0,53,536	0/0:17,0:16:45.11:0,45,484	0/0:14,0:14:33.08:0,33,353	0/0:14,0:14:36.09:0,36,387	0/0:2,0:2:6.02:0,6,64	0/0:8,0:8:24.04:0,24,249	0/0:10,0:10:27.07:0,27,290	0/0:18,0:18:42.10:0,42,451	1/1:7,9:16:10.98:374,11,0	1/1:3,21:24:35.68:649,36,0	0/1:3,10:13:1.37:300,0,1
chr10	22484862	.	AG	A	1583.13	PASS	AB=0.897;AC=13;AF=0.232;AN=56;BaseQRankSum=8.461;DP=440;FS=3.411;HRun=1;HaplotypeScore=58.7067;InbreedingCoeff=0.4710;MQ=57.75;MQ0=5;MQRankSum=2.230;QD=8.84;ReadPosRankSum=-3.107;VQSLOD=0.0058;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:17,0:17:38.78:39,0,61	0/0:8,0:8:24.08:0,24,343	0/0:16,0:6:15.03:0,15,192	0/0:5,0:2:6.02:0,6,86	0/0:27,0:27:69.19:0,69,948	0/0:12,0:12:36.11:0,36,497	0/0:11,0:10:30.03:0,30,386	0/1:37,0:37:52.17:124,0,52	0/0:11,0:11:24.08:0,24,343	0/1:27,1:27:44.05:44,0,64	0/1:16,0:15:20.72:21,0,30	0/0:10,0:10:30.10:0,30,429	0/0:14,0:14:42.09:0,42,575	0/0:13,0:13:39.13:0,39,556	1/1:1,14:14:33.10:445,33,0	0/1:1,11:12:9.75:381,0,10	0/0:27,0:27:81.14:0,81,1073	0/0:24,0:22:21.37:0,21,702	0/0:19,0:18:54.14:0,54,720	0/0:13,0:13:36.01:0,36,485	0/0:13,0:13:39.11:0,39,537	0/0:2,0:2:6.02:0,6,86	0/0:9,0:9:27.08:0,27,367	0/0:10,0:10:30.10:0,30,419	0/0:17,0:17:48.13:0,48,649	1/1:15,0:15:27.33:209,27,0	1/1:26,0:26:50.85:363,51,0	1/1:13,0:13:11.61:134,12,0
chr10	22484961	.	GA	G	4432.15	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=9.102;DP=500;FS=1.623;HRun=9;HaplotypeScore=58.5442;InbreedingCoeff=0.9467;MQ=77.85;MQ0=0;MQRankSum=-2.632;QD=22.27;ReadPosRankSum=2.732;VQSLOD=5.7184;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,21:22:53.98:486,54,0	0/0:6,0:6:15.04:0,15,173	0/0:15,1:16:2.18:0,2,191	0/0:13,0:12:26.66:0,27,204	0/0:29,0:29:72.21:0,72,831	1/1:3,13:16:39.02:357,39,0	1/1:0,19:19:48.03:439,48,0	0/0:34,0:36:96.09:0,96,1062	0/0:11,0:11:33.09:0,33,372	0/0:34,0:34:96.27:0,96,1096	0/0:19,0:19:51.14:0,51,579	1/1:1,12:13:36.02:330,36,0	1/1:3,19:22:57.03:522,57,0	1/1:1,12:13:33.02:302,33,0	1/1:3,8:10:24.01:219,24,0	1/1:3,14:17:10.40:350,10,0	0/0:19,0:19:54.16:0,54,623	0/0:13,0:13:30.09:0,30,346	0/0:19,0:19:54.14:0,54,609	0/0:24,0:24:72.20:0,72,821	0/0:7,0:7:12.04:0,12,139	1/1:1,15:16:45.02:412,45,0	1/1:2,17:19:42.02:384,42,0	1/1:2,7:9:12:110,12,0	1/1:1,21:22:57.03:522,57,0	0/0:22,0:22:57.16:0,57,646	0/0:28,2:30:23.29:0,23,767	0/0:3,0:3:9.03:0,9,104
chr10	22485140	.	GACAA	G	1210.39	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.286;DP=686;FS=0.000;HRun=0;HaplotypeScore=115.9615;InbreedingCoeff=0.9987;MQ=72.10;MQ0=1;MQRankSum=-0.771;QD=41.74;ReadPosRankSum=3.142;VQSLOD=3.7650;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:25:69.10:0,69,1623	0/0:10,0:10:30.09:0,30,701	0/0:29,0:26:62.32:0,62,1407	0/0:25,0:22:62.12:0,62,1078	1/1:0,29:29:69.24:1305,69,0	0/0:28,0:28:84.19:0,84,1843	0/0:11,0:11:30.09:0,30,750	0/0:33,0:33:93.26:0,93,1972	0/0:21,0:21:63.17:0,63,1429	0/0:22,0:22:63.19:0,63,1537	0/0:15,0:15:45.14:0,45,1107	0/0:26,0:26:75.13:0,75,1756	0/0:39,0:39:99:0,111,2487	0/0:26,0:26:72.22:0,72,1719	0/0:36,0:36:99:0,102,2062	0/0:30,0:30:90.27:0,90,2201	0/0:25,0:25:69.17:0,69,1663	0/0:14,0:14:36.05:0,36,743	0/0:19,0:19:51.08:0,51,1039	0/0:37,0:37:99:0,105,2558	0/0:31,0:31:87.27:0,87,2175	0/0:21,0:21:63.22:0,63,1661	0/0:23,0:23:69:0,69,1447	0/0:12,0:12:35.61:0,36,886	0/0:15,0:15:42.12:0,42,974	0/0:24,0:24:72.20:0,72,1721	0/0:43,0:42:99:0,123,3042	0/0:16,0:15:48.16:0,48,1292
chr10	22485344	.	T	TCAATGACCAG	65786.38	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-9.262;DP=825;FS=8.437;HRun=0;HaplotypeScore=214.6446;InbreedingCoeff=0.9975;MQ=81.96;MQ0=0;MQRankSum=-20.119;QD=112.07;ReadPosRankSum=0.033;VQSLOD=4.3427;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,24:40:75.26:3737,75,0	0/0:13,0:13:36.12:0,36,1176	0/0:33,0:33:84.25:0,84,2334	0/0:32,0:32:89.80:0,90,2504	1/1:14,21:42:65.97:2309,66,0	1/1:14,14:31:78.27:3537,78,0	1/1:11,16:32:78.27:3796,78,0	1/1:26,10:41:99:5028,120,0	0/0:25,0:25:72.25:0,72,2350	1/1:11,15:29:81.25:3607,81,0	1/1:8,10:20:42.14:1772,42,0	1/1:10,26:38:99:4958,105,0	1/1:7,28:37:99:5082,102,0	1/1:12,15:32:75.26:3631,75,0	1/1:7,27:37:99:5064,102,0	1/1:6,23:32:56.28:4008,56,0	0/0:33,0:33:93.27:0,93,2867	0/0:22,0:22:60.20:0,60,1744	0/0:13,0:13:35.66:0,36,957	0/0:36,0:36:99:0,108,3521	0/0:31,0:31:90.31:0,90,2874	1/1:6,17:27:69.19:2916,69,0	1/1:7,21:32:69.13:3031,69,0	1/1:13,9:24:39.09:1734,39,0	1/1:10,13:23:51.17:2442,51,0	1/1:14,17:34:96.31:4635,96,0	1/1:6,19:28:72.25:3734,72,0	1/1:1,4:8:15.05:766,15,0
chr10	22485779	.	TA	T	4917.73	PASS	AB=0.835;AC=27;AF=0.482;AN=56;BaseQRankSum=-3.261;DP=557;FS=18.096;HRun=12;HaplotypeScore=71.5702;InbreedingCoeff=0.7849;MQ=74.20;MQ0=1;MQRankSum=0.863;QD=14.55;ReadPosRankSum=2.864;VQSLOD=3.7689;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:21:45.88:0,46,246	0/0:8,0:8:21.04:0,21,213	0/0:17,0:16:18.03:0,18,177	0/1:7,0:8:10.28:10,0,41	1/1:7,24:32:58.69:447,59,0	1/1:5,16:22:51.87:383,52,0	1/1:3,15:18:17.38:318,17,0	1/1:11,20:31:29.19:402,29,0	0/0:11,0:12:23.16:0,23,241	1/1:6,13:19:38.83:302,39,0	1/1:7,13:21:31.82:238,32,0	1/1:3,15:18:38.83:302,39,0	1/1:3,23:27:61.78:470,62,0	0/1:4,15:20:9.22:220,0,9	0/0:6,0:28:57.30:0,57,329	0/0:5,0:20:48.79:0,49,291	0/0:11,1:12:9.81:0,10,270	0/0:3,0:3:9.02:0,9,91	0/1:18,1:19:10.40:10,0,264	0/0:24,0:24:62.99:0,63,591	0/0:17,0:17:36.07:0,36,365	1/1:2,17:21:45.86:337,46,0	1/1:5,35:40:68.18:712,68,0	1/1:1,18:19:47.81:372,48,0	1/1:4,19:23:50.77:394,51,0	0/0:21,0:21:42.07:0,42,421	0/0:24,0:27:50.76:0,51,480	0/0:9,0:9:15.03:0,15,152
chr10	22486007	.	CATACGT	C	3849.21	PASS	AB=0.528;AC=5;AF=0.089;AN=56;BaseQRankSum=12.330;DP=675;FS=3.063;HRun=0;HaplotypeScore=147.0667;InbreedingCoeff=0.7760;MQ=87.79;MQ0=0;MQRankSum=-12.530;QD=51.32;ReadPosRankSum=1.412;VQSLOD=4.0122;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,11:12:27.09:615,27,0	0/0:10,0:10:27.09:0,27,954	0/0:22,0:22:48.15:0,48,1494	0/0:27,0:27:62.80:0,63,1716	0/0:40,0:40:99:0,117,4015	0/0:32,0:32:96.28:0,96,3260	0/0:14,0:14:39.13:0,39,1340	0/0:41,0:41:99:0,111,3540	0/0:23,0:23:66.23:0,66,2331	0/0:24,0:24:66.23:0,66,2262	0/0:27,0:27:75.22:0,75,2469	0/0:26,0:26:66.17:0,66,2155	0/0:39,0:39:99:0,111,3699	0/0:28,0:28:81.28:0,81,2776	1/1:1,34:34:87.16:1832,87,0	0/1:3,25:28:39.76:1402,0,40	0/0:8,0:8:21.07:0,21,679	0/0:8,0:8:24.08:0,24,839	0/0:13,0:13:39.13:0,39,1255	0/0:26,0:26:78.23:0,78,2380	0/0:23,0:23:66.21:0,66,2162	0/0:21,0:21:63.20:0,63,2142	0/0:28,0:28:81.28:0,81,2784	0/0:22,0:22:66.23:0,66,2331	0/0:24,0:24:66.23:0,66,2332	0/0:29,0:29:78.27:0,78,2727	0/0:38,0:38:99:0,105,3465	0/0:7,0:7:21.07:0,21,699
chr10	22486356	.	GA	G	2305.33	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=10.507;DP=433;FS=3.056;HRun=4;HaplotypeScore=40.0998;InbreedingCoeff=0.9706;MQ=74.60;MQ0=0;MQRankSum=-0.234;QD=32.93;ReadPosRankSum=2.816;VQSLOD=3.9184;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:51.17:0,51,714	0/0:15,0:15:42.14:0,42,588	0/0:9,0:9:15.39:0,15,315	0/0:7,0:6:18.06:0,18,235	0/0:26,0:26:75.24:0,75,1032	0/0:25,0:25:69.23:0,69,966	0/0:10,0:10:30.10:0,30,420	0/0:28,0:27:84.27:0,84,1148	0/0:5,0:5:15.04:0,15,193	0/0:19,0:19:57.19:0,57,797	0/0:24,0:24:72.24:0,72,1008	0/0:14,0:14:42.13:0,42,571	0/0:17,0:17:51.17:0,51,714	0/0:12,0:12:33.11:0,33,456	0/0:12,0:12:36.12:0,36,504	0/0:5,0:5:12.04:0,12,168	0/0:21,0:21:57.17:0,57,780	0/0:11,0:11:27.05:0,27,353	0/0:12,0:12:33.11:0,33,462	0/0:17,0:17:51.15:0,51,682	0/0:6,0:6:18.03:0,18,231	0/0:11,0:11:33.11:0,33,462	0/0:7,0:7:21.07:0,21,294	0/0:11,0:11:33.11:0,33,462	0/0:21,0:21:63.21:0,63,882	1/1:0,26:26:78.24:936,78,0	1/1:1,29:30:84.26:1008,84,0	1/1:0,14:14:42.13:504,42,0
chr10	22487320	.	TAC	T	689.46	PASS	AB=1.000;AC=31;AF=0.620;AN=50;BaseQRankSum=0.240;DP=475;FS=23.892;HRun=0;HaplotypeScore=79.9576;InbreedingCoeff=0.4138;MQ=69.74;MQ0=9;MQRankSum=1.928;QD=2.53;ReadPosRankSum=2.106;VQSLOD=0.0985;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:19:2.13:0,2,5	0/0:4,0:4:4.63:0,5,16	./.	./.	0/0:21,0:21:1.98:0,2,21	0/0:12,0:11:2.24:0,2,12	1/1:18,0:18:13.21:58,13,0	0/0:23,0:21:18.37:0,18,159	1/1:11,3:14:3.01:33,3,0	1/1:13,0:13:1.96:30,2,0	0/0:14,0:14:3:0,3,25	1/1:18,0:17:14.52:57,15,0	1/1:13,0:13:6.89:25,7,0	0/1:14,0:14:0.26:0,0,0	1/1:19,0:18:3.15:12,3,0	1/1:11,0:11:0.89:3,1,0	1/1:22,0:21:12.57:163,13,0	1/1:14,2:15:17.26:166,17,0	1/1:20,0:19:7.57:67,8,0	./.	1/1:26,0:26:18.70:136,19,0	1/1:5,0:4:2.04:6,2,0	1/1:14,0:14:0.47:1,0,0	1/1:15,0:15:2.98:22,3,0	0/1:18,0:18:18.55:32,0,19	0/1:16,0:16:0.10:17,0,0	0/0:8,0:8:3.01:0,3,43	0/0:9,0:9:2.89:0,3,18
chr10	22487361	.	ACT	A	2564.45	PASS	AB=0.905;AC=38;AF=0.704;AN=54;BaseQRankSum=3.929;DP=463;FS=29.425;HRun=0;HaplotypeScore=83.3618;InbreedingCoeff=-0.1889;MQ=47.19;MQ0=16;MQRankSum=2.883;QD=5.79;ReadPosRankSum=-0.997;VQSLOD=0.8267;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:20:11.86:86,12,0	0/1:4,0:4:9.79:10,0,20	./.	0/1:17,0:4:4.19:10,0,4	0/1:15,0:15:87.02:108,0,87	0/1:21,0:19:28.31:125,0,28	1/1:21,0:21:21.64:236,22,0	0/1:30,0:26:65.09:65,0,100	0/1:13,0:13:14.31:14,0,96	1/1:13,0:11:13.14:109,13,0	1/1:8,0:8:2.97:24,3,0	1/1:16,2:17:28.57:252,29,0	1/1:13,0:13:26.27:192,26,0	1/1:12,0:12:11.86:85,12,0	1/1:17,0:16:23.76:177,24,0	1/1:10,0:10:17.96:146,18,0	0/1:25,0:23:66.69:67,0,67	0/1:19,1:20:99:123,0,113	0/1:14,0:12:21.26:21,0,87	0/0:6,8:13:5.92:0,6,43	0/1:49,0:47:99:185,0,213	1/1:5,0:5:5.98:46,6,0	0/1:4,11:15:0.35:0,0,0	0/1:5,24:28:16.98:40,0,17	0/1:6,14:19:13.96:82,0,14	1/1:12,1:13:22.95:262,23,0	0/1:11,0:11:2.32:114,0,2	1/1:9,0:9:15.73:134,16,0
chr10	22487363	.	TCA	T	660.71	PASS	AB=1.000;AC=21;AF=0.389;AN=54;BaseQRankSum=3.150;DP=464;FS=13.552;HRun=0;HaplotypeScore=92.8528;InbreedingCoeff=0.2474;MQ=47.47;MQ0=16;MQRankSum=0.963;QD=2.87;ReadPosRankSum=0.148;VQSLOD=1.2556;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:19:3.56:0,4,18	0/0:4,0:4:6.01:0,6,72	./.	0/0:15,0:4:4.58:0,5,46	0/0:14,0:14:18.03:0,18,230	0/0:21,0:19:11.10:0,11,107	0/0:22,0:22:14.64:0,15,99	1/1:16,15:28:19.52:373,20,0	0/1:15,0:14:40.84:41,0,249	1/1:7,6:11:10.61:166,11,0	1/1:3,5:8:1.23:3,1,0	0/1:18,0:17:3.17:15,0,3	1/1:13,0:13:1.29:7,1,0	0/0:12,0:12:1.82:0,2,5	0/0:17,0:16:3.79:0,4,12	0/0:10,0:10:0.72:0,1,2	0/1:22,0:20:27.39:27,0,133	0/0:21,0:21:0.06:0,0,312	0/1:15,0:13:7.26:7,0,159	0/0:14,0:13:6.02:0,6,86	0/0:50,0:48:9.83:0,10,598	0/0:6,1:7:3.46:0,3,24	0/1:13,0:13:0:0,0,0	0/1:30,0:29:14.64:15,0,38	1/1:19,0:18:5.95:41,6,0	1/1:13,0:13:9.23:54,9,0	0/1:11,0:11:25.70:26,0,31	1/1:8,0:9:9.75:40,10,0
chr10	22487436	.	TACAC	T	711.67	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=0.798;DP=516;FS=5.967;HRun=0;HaplotypeScore=124.3017;InbreedingCoeff=0.6387;MQ=49.12;MQ0=17;MQRankSum=1.597;QD=16.94;ReadPosRankSum=0.106;VQSLOD=2.9554;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:13:6.46:0,6,50	0/0:3,0:3:6.02:0,6,137	0/0:45,0:13:2.86:0,3,24	0/0:44,0:13:6.02:0,6,73	0/0:13,0:13:3.01:0,3,47	0/0:20,0:20:14.21:0,14,191	0/0:24,0:24:18.46:0,18,258	0/0:24,0:21:24.51:0,25,431	0/0:19,0:20:11.75:0,12,655	0/0:18,0:18:35.83:0,36,638	0/0:10,0:10:12.63:0,13,271	0/0:14,0:14:5.61:0,6,72	0/0:10,0:10:17.75:0,18,146	0/0:14,0:14:11.74:0,12,148	0/0:19,0:21:19.62:0,20,187	0/0:9,0:9:10.05:0,10,81	0/0:17,0:16:36.08:0,36,698	0/0:15,0:18:35.60:0,36,545	0/0:16,0:17:27.06:0,27,519	0/0:11,0:14:32.83:0,33,621	0/0:36,0:33:34.66:0,35,663	0/0:3,0:12:17.72:0,18,141	0/0:10,0:10:2.18:0,2,24	0/0:16,0:16:15.52:0,16,208	0/0:26,0:26:10.20:0,10,145	1/1:7,11:17:18.08:506,18,0	1/1:5,7:12:12.04:191,12,0	1/1:4,7:11:9.03:144,9,0
chr10	22489456	.	TA	T	2762.54	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=12.942;DP=639;FS=7.375;HRun=7;HaplotypeScore=57.5293;InbreedingCoeff=0.8985;MQ=71.81;MQ0=0;MQRankSum=0.121;QD=23.21;ReadPosRankSum=2.248;VQSLOD=3.6800;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:21:60.19:0,60,753	0/0:9,0:9:27.09:0,27,339	0/0:10,0:10:30.01:0,30,322	0/1:8,0:7:5.99:6,0,148	0/0:35,0:35:99:0,99,1245	0/0:31,0:31:84.23:0,84,1017	0/0:16,0:16:48.15:0,48,604	0/0:31,0:31:72.23:0,72,906	0/0:27,0:27:72.22:0,72,894	0/0:42,0:42:99:0,99,1217	0/0:23,0:23:63.18:0,63,778	0/0:14,0:14:39.12:0,39,490	0/0:16,0:17:42.13:0,42,528	0/0:28,0:28:84.24:0,84,1029	1/1:1,17:18:48.11:490,48,0	1/1:3,20:23:13.37:452,13,0	0/0:16,0:16:42.13:0,42,527	0/0:9,0:9:24.08:0,24,302	0/0:20,0:20:54.16:0,54,668	0/0:50,0:50:99:0,141,1759	0/0:22,0:22:60.17:0,60,728	0/0:22,0:22:60.18:0,60,744	0/0:29,0:29:87.28:0,87,1094	0/0:19,0:19:48.14:0,48,580	0/0:28,0:28:75.24:0,75,943	1/1:1,30:31:90.20:918,90,0	1/1:2,31:33:90.20:918,90,0	1/1:1,5:6:15.03:153,15,0
chr10	22490241	.	C	CAGAGAGAGAGAG	5430.03	PASS	AB=1.000;AC=31;AF=0.912;AN=34;BaseQRankSum=-1.593;DP=434;FS=6.491;HRun=0;HaplotypeScore=153.8639;InbreedingCoeff=-0.0135;MQ=79.43;MQ0=8;MQRankSum=1.559;QD=21.13;ReadPosRankSum=0.154;VQSLOD=2.9956;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	./.	1/1:22,0:22:4.24:27,4,0	./.	1/1:32,0:32:30.76:879,31,0	1/1:12,3:16:11.91:480,12,0	1/1:16,0:14:15.05:374,15,0	./.	./.	0/1:15,0:15:11.90:265,0,12	./.	1/1:7,0:7:3.01:110,3,0	1/1:21,0:21:10.56:229,11,0	0/1:15,0:15:34.29:373,0,34	1/1:8,0:7:8.99:309,9,0	1/1:22,0:22:27.80:709,28,0	./.	1/1:8,0:8:2.93:68,3,0	1/1:9,0:8:3.01:78,3,0	0/1:13,0:13:0:0,0,0	1/1:14,0:14:6:121,6,0	./.	1/1:12,0:12:15.04:404,15,0	1/1:23,0:23:24.08:849,24,0	1/1:4,0:4:6.91:155,7,0
chr10	22490883	.	A	AC	195.72	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=-1.759;DP=516;FS=0.000;HRun=3;HaplotypeScore=81.8209;InbreedingCoeff=0.5416;MQ=63.18;MQ0=11;MQRankSum=-0.370;QD=5.76;ReadPosRankSum=-0.369;VQSLOD=0.2089;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:68.88:0,69,597	0/0:10,0:10:23.94:0,24,201	0/1:19,0:10:18.25:18,0,86	0/0:7,0:4:4.88:0,5,20	0/0:23,0:20:38.93:0,39,332	0/0:21,0:20:50.93:0,51,445	0/0:16,0:16:38.86:0,39,317	0/0:20,0:19:53.93:0,54,458	0/0:12,0:11:25.55:0,26,220	0/0:16,0:16:44.99:0,45,395	0/0:24,0:23:65.98:0,66,571	0/0:15,0:15:26.95:0,27,228	0/0:16,0:16:35.92:0,36,301	0/0:20,0:20:38.64:0,39,334	0/0:11,0:11:29.86:0,30,244	0/0:23,0:22:57.33:0,57,473	0/0:29,0:28:14.93:0,15,229	1/1:1,14:15:21.07:281,21,0	0/0:27,0:26:11.82:0,12,271	0/0:22,0:20:9.54:0,10,129	0/0:11,0:11:12.84:0,13,122	0/0:23,0:22:47.95:0,48,425	0/0:20,0:20:41.83:0,42,343	0/0:19,0:20:47.43:0,47,395	0/0:14,0:14:29.99:0,30,270	0/0:22,0:22:53.83:0,54,452	0/0:23,0:23:59.81:0,60,476	0/0:7,0:6:17.95:0,18,144
chr10	22490886	.	CA	C	2528.86	PASS	AB=0.599;AC=37;AF=0.661;AN=56;BaseQRankSum=-0.314;DP=521;FS=0.952;HRun=14;HaplotypeScore=73.9124;InbreedingCoeff=0.7322;MQ=63.62;MQ0=9;MQRankSum=-0.110;QD=6.80;ReadPosRankSum=3.189;VQSLOD=2.8567;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,25:30:34.52:380,35,0	1/1:1,8:9:20.82:144,21,0	0/0:21,0:10:21.63:0,22,138	0/0:7,0:4:5.31:0,5,26	1/1:4,1:19:26.62:95,27,0	0/1:9,11:20:20.91:156,0,21	1/1:3,13:16:29.52:202,30,0	1/1:4,0:20:30.67:90,31,0	0/0:13,0:13:20.57:0,21,141	1/1:3,1:17:26.37:97,26,0	1/1:5,1:24:35.53:115,36,0	1/1:3,8:13:15.69:94,16,0	1/1:4,12:16:23.77:164,24,0	0/1:7,13:21:28.71:117,0,29	1/1:2,0:11:16.27:47,16,0	1/1:6,1:24:19.91:88,20,0	0/0:12,0:29:44.36:0,44,275	0/0:14,0:15:20.49:0,20,122	0/0:11,0:26:66.56:0,67,426	0/0:8,0:21:37.52:0,38,212	0/0:6,0:13:20.28:0,20,124	1/1:8,13:22:5.97:169,6,0	1/1:5,15:20:26.67:185,27,0	1/1:4,15:19:35.69:246,36,0	0/1:3,11:14:4.17:120,0,4	1/1:3,0:21:36.65:107,37,0	1/1:6,0:23:30.54:90,31,0	1/1:2,0:6:10.18:30,10,0
chr10	22492595	.	AGTTT	A	2332.27	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.665;DP=590;FS=0.630;HRun=0;HaplotypeScore=92.5760;InbreedingCoeff=0.9986;MQ=83.43;MQ0=0;MQRankSum=-4.487;QD=56.88;ReadPosRankSum=2.946;VQSLOD=5.1674;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:75.26:0,75,2158	0/0:11,0:11:33.11:0,33,956	0/0:22,0:22:66.23:0,66,1765	0/0:15,0:14:42.10:0,42,1151	0/0:22,0:22:66.23:0,66,1912	0/0:34,0:34:99:0,102,2893	0/0:16,0:16:48.15:0,48,1333	0/0:31,0:30:93.32:0,93,2601	0/0:15,0:15:45.15:0,45,1265	0/0:23,0:23:69.24:0,69,1937	0/0:24,0:24:72.25:0,72,2025	0/0:18,0:18:51.17:0,51,1479	0/0:18,0:18:54.19:0,54,1529	0/0:17,0:17:51.18:0,51,1478	1/1:0,24:24:66.23:1384,66,0	1/1:0,17:17:51.18:1070,51,0	0/0:20,0:20:60.21:0,60,1635	0/0:8,0:8:24.08:0,24,689	0/0:27,0:27:81.28:0,81,2258	0/0:34,0:34:99:0,99,2869	0/0:18,0:18:54.19:0,54,1534	0/0:21,0:21:63.22:0,63,1790	0/0:17,0:17:51.18:0,51,1466	0/0:15,0:15:45.15:0,45,1304	0/0:30,0:30:90.31:0,90,2595	0/0:31,0:31:93.32:0,93,2681	0/0:26,0:26:78.27:0,78,2263	0/0:11,0:11:33.11:0,33,956
chr10	22492791	.	G	GT	1846.73	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-9.384;DP=686;FS=5.453;HRun=8;HaplotypeScore=74.4163;InbreedingCoeff=0.9939;MQ=91.84;MQ0=1;MQRankSum=-0.199;QD=26.76;ReadPosRankSum=-1.400;VQSLOD=3.8655;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:72.04:0,72,659	0/0:8,0:8:23.99:0,24,214	0/0:30,0:29:52.45:0,52,548	0/0:34,0:34:15.96:0,16,414	0/0:25,0:25:69.02:0,69,626	0/0:35,0:35:99:0,99,906	0/0:17,0:17:44.99:0,45,401	0/0:30,0:30:65.99:0,66,597	0/0:13,0:14:40.83:0,41,357	0/0:31,0:31:84.03:0,84,769	0/0:25,0:25:60.03:0,60,549	0/0:17,0:17:51.03:0,51,467	0/0:27,0:27:65.99:0,66,598	0/0:36,0:36:93.02:0,93,846	0/0:21,0:21:51.02:0,51,467	0/0:24,0:24:72.01:0,72,649	0/0:36,0:35:72.02:0,72,658	0/0:24,0:24:56.94:0,57,507	0/0:29,0:29:63.48:0,63,572	0/0:28,0:28:78.04:0,78,714	0/0:16,0:16:45.01:0,45,406	0/0:24,0:24:60.01:0,60,544	0/0:24,0:24:69.04:0,69,631	0/0:15,0:15:41.99:0,42,377	0/0:20,0:20:50.98:0,51,456	1/1:4,28:32:59.74:916,60,0	1/1:1,27:28:69.21:796,69,0	1/1:1,8:9:24.07:277,24,0
chr10	22494258	.	A	ATCTGTCTGGTCTG	3100.17	PASS	AB=0.871;AC=5;AF=0.093;AN=54;BaseQRankSum=3.530;DP=215;FS=0.000;HRun=0;HaplotypeScore=80.5242;InbreedingCoeff=0.3712;MQ=55.84;MQ0=8;MQRankSum=-6.920;QD=79.49;ReadPosRankSum=1.243;VQSLOD=2.9406;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:42.13:0,42,1531	0/0:2,0:2:6.02:0,6,221	0/0:19,0:6:14.86:0,15,313	0/0:17,0:7:18.01:0,18,323	0/0:5,0:5:12.03:0,12,367	0/0:5,0:5:12.03:0,12,311	0/0:2,0:2:6.02:0,6,172	0/0:10,0:9:24.07:0,24,753	0/0:3,0:2:6.02:0,6,242	0/0:9,0:9:21.07:0,21,778	0/0:5,0:5:6.01:0,6,78	0/0:7,0:7:18.06:0,18,643	0/0:11,0:11:33.09:0,33,1065	0/0:4,0:4:12.04:0,12,442	0/1:8,1:9:3.08:740,0,3	1/1:8,0:8:9.03:499,9,0	0/0:5,0:5:14.84:0,15,485	0/0:4,0:4:6.02:0,6,166	0/0:13,0:13:18.06:0,18,643	0/0:6,0:6:18.05:0,18,555	0/0:14,0:13:30.08:0,30,1019	0/0:5,0:5:15.04:0,15,509	0/0:4,0:4:12.03:0,12,388	0/0:6,0:6:18.06:0,18,718	0/0:4,0:4:12.04:0,12,405	0/1:10,3:12:45.24:1394,0,45	0/1:8,1:9:1.96:582,0,2	./.
chr10	22494326	.	ATCTG	A	4614.08	PASS	AB=0.553;AC=15;AF=0.268;AN=56;BaseQRankSum=12.964;DP=524;FS=14.620;HRun=0;HaplotypeScore=91.3632;InbreedingCoeff=0.8649;MQ=57.87;MQ0=7;MQRankSum=-3.866;QD=33.19;ReadPosRankSum=1.012;VQSLOD=3.7334;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:81.28:0,81,1859	0/0:5,0:5:15.05:0,15,351	0/0:25,0:4:12.04:0,12,240	0/0:32,0:16:17.70:0,18,598	0/0:14,0:14:33.11:0,33,821	0/0:14,0:14:36.12:0,36,898	0/0:17,0:17:42.14:0,42,954	1/1:6,12:16:18.05:264,18,0	0/0:16,0:16:42.14:0,42,1027	1/1:1,20:21:60.19:990,60,0	1/1:0,12:12:21.07:358,21,0	0/0:16,0:16:48.16:0,48,1077	0/0:21,0:21:57.20:0,57,1297	0/0:15,0:15:45.15:0,45,1077	1/1:4,19:23:42.14:716,42,0	0/1:4,17:21:30.06:644,0,30	0/0:11,1:12:33.11:0,33,774	0/0:21,0:20:57.20:0,57,1383	0/0:14,0:13:30.10:0,30,684	0/0:14,0:14:39.13:0,39,813	0/0:47,0:47:99:0,129,2993	0/0:17,0:17:45.15:0,45,1066	0/0:15,0:15:45.15:0,45,1034	0/0:23,0:23:66.23:0,66,1523	0/0:16,0:16:48.16:0,48,1155	1/1:7,14:21:23.94:782,24,0	1/1:4,18:22:48.15:809,48,0	1/1:0,1:1:3.01:51,3,0
chr10	22495149	.	G	GA	1512.03	PASS	AB=0.917;AC=8;AF=0.143;AN=56;BaseQRankSum=-5.948;DP=550;FS=8.337;HRun=9;HaplotypeScore=54.5773;InbreedingCoeff=0.7605;MQ=65.83;MQ0=1;MQRankSum=0.103;QD=17.38;ReadPosRankSum=-0.307;VQSLOD=3.1346;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:47.97:0,48,417	0/0:8,0:8:24:0,24,208	0/1:13,0:6:1.17:1,0,20	0/0:8,0:5:9.31:0,9,66	0/0:26,0:26:68.97:0,69,599	0/0:29,0:29:68.97:0,69,599	0/0:21,0:21:56.98:0,57,495	0/0:29,0:29:25.68:0,26,410	0/0:17,0:17:50.99:0,51,442	0/0:17,0:17:47.98:0,48,415	0/0:26,0:26:65.96:0,66,573	0/0:19,0:19:50.99:0,51,442	0/0:28,0:28:68.97:0,69,599	0/0:18,0:18:41.96:0,42,365	0/0:18,0:18:44.99:0,45,391	0/0:16,0:16:35.97:0,36,313	0/0:24,0:24:53.98:0,54,469	0/1:8,1:8:9.20:9,0,154	0/0:25,0:25:50.96:0,51,440	0/0:17,0:17:38.98:0,39,339	0/0:17,0:17:47.99:0,48,417	0/0:25,0:25:44.50:0,44,547	0/0:19,0:19:50.97:0,51,443	0/0:16,0:17:44.03:0,44,371	0/0:17,0:17:50.99:0,51,443	1/1:6,16:22:48.11:521,48,0	1/1:2,27:29:68.81:763,69,0	1/1:0,13:13:33.09:365,33,0
chr10	22496933	.	T	TAGA	5968.98	PASS	AB=1.000;AC=27;AF=0.482;AN=56;BaseQRankSum=9.043;DP=470;FS=7.220;HRun=0;HaplotypeScore=82.8947;InbreedingCoeff=0.9663;MQ=77.96;MQ0=1;MQRankSum=-3.441;QD=27.51;ReadPosRankSum=0.879;VQSLOD=4.4729;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:11:20.90:289,21,0	0/0:5,0:5:15.03:0,15,194	0/0:25,0:24:30.08:0,30,358	0/0:13,0:11:16.83:0,17,165	1/1:17,1:18:43.22:602,43,0	1/1:9,0:9:18.06:275,18,0	0/1:10,0:10:0.08:0,0,0	1/1:18,0:18:28.06:486,28,0	0/0:20,0:20:54.13:0,54,779	1/1:12,0:12:33.07:440,33,0	1/1:15,0:15:18.07:286,18,0	1/1:17,1:18:27.09:417,27,0	1/1:20,2:22:41.95:650,42,0	1/1:19,0:19:36.11:534,36,0	0/0:27,0:27:66.16:0,66,924	0/0:23,0:23:64.74:0,65,908	0/0:18,0:18:54.13:0,54,755	0/0:15,0:15:41.98:0,42,599	0/0:13,0:13:36.10:0,36,517	0/0:21,0:21:54.02:0,54,723	0/0:6,0:6:15.03:0,15,211	1/1:10,1:11:30.10:478,30,0	1/1:18,1:19:29.92:512,30,0	1/1:18,1:20:39.13:620,39,0	1/1:14,1:15:24.08:379,24,0	0/0:19,0:19:54.15:0,54,765	0/0:37,0:37:93.23:0,93,1310	0/0:10,0:10:30.09:0,30,423
chr10	22496938	.	G	GAAGAA	8687.93	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=4.415;DP=545;FS=11.357;HRun=0;HaplotypeScore=114.9402;InbreedingCoeff=0.9680;MQ=68.46;MQ0=1;MQRankSum=-2.545;QD=30.81;ReadPosRankSum=-1.444;VQSLOD=3.8504;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,11:14:22.41:552,22,0	0/0:5,0:5:15.03:0,15,247	0/0:17,0:17:33.43:0,33,459	0/0:11,0:9:12.87:0,13,168	1/1:3,17:26:65.67:1234,66,0	1/1:2,1:11:20.55:370,21,0	1/1:2,0:10:3.38:10,3,0	1/1:6,16:32:63.57:1093,64,0	0/0:19,0:21:50.69:0,51,1078	1/1:1,13:21:22.48:823,22,0	1/1:2,9:20:32.95:594,33,0	1/1:1,0:19:27.09:457,27,0	1/1:6,0:29:41.97:640,42,0	1/1:4,0:21:15.66:601,16,0	0/0:27,0:27:72.12:0,72,1266	0/0:26,0:26:67.78:0,68,1249	0/0:23,0:23:60.04:0,60,1046	0/0:16,0:17:41.09:0,41,818	0/0:16,0:17:32.85:0,33,750	0/0:19,0:22:60.11:0,60,1021	0/0:7,0:7:18.01:0,18,310	1/1:1,0:15:40.75:582,41,0	1/1:2,1:22:30.02:604,30,0	1/1:1,0:22:39.13:684,39,0	1/1:3,1:19:23.75:444,24,0	0/0:21,0:21:54.11:0,54,1009	0/0:34,0:37:78.25:0,78,1757	0/0:9,0:10:30.09:0,30,571
chr10	22497331	.	T	TTTC	10680.46	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=3.183;DP=575;FS=0.000;HRun=0;HaplotypeScore=99.5258;InbreedingCoeff=0.9888;MQ=69.09;MQ0=0;MQRankSum=0.810;QD=34.56;ReadPosRankSum=1.336;VQSLOD=5.4990;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:25,1:26:57.18:768,57,0	0/0:8,0:8:24.08:0,24,365	0/0:16,0:11:21.93:0,22,257	0/0:19,0:16:20.09:0,20,237	1/1:1,26:28:59.96:1041,60,0	1/1:4,23:28:49.08:1028,49,0	1/1:2,11:14:21.07:435,21,0	1/1:7,28:37:78.11:1106,78,0	0/0:13,0:13:36.11:0,36,508	1/1:4,23:28:69.62:1200,70,0	1/1:3,25:28:66.06:1142,66,0	1/1:2,11:15:18.06:371,18,0	1/1:5,23:29:42.14:837,42,0	1/1:5,14:19:42.14:824,42,0	0/0:21,0:21:51.41:0,51,273	0/0:20,0:20:42.54:0,43,229	0/0:37,0:37:99:0,105,1534	0/0:15,0:15:41.92:0,42,590	0/0:18,0:18:48.12:0,48,629	0/0:21,0:21:57.17:0,57,838	0/0:7,0:7:15.05:0,15,232	1/1:0,8:9:17.97:302,18,0	1/1:3,20:24:44.82:926,45,0	1/1:1,4:6:12.03:247,12,0	1/1:4,13:18:24.01:453,24,0	0/0:27,0:27:38.83:0,39,380	0/0:31,0:30:80.57:0,81,470	0/0:13,0:12:24.30:0,24,159
chr10	22497337	.	C	CT	4135.57	PASS	AB=0.992;AC=33;AF=0.589;AN=56;BaseQRankSum=5.292;DP=592;FS=12.302;HRun=10;HaplotypeScore=108.7695;InbreedingCoeff=0.4235;MQ=71.80;MQ0=0;MQRankSum=-3.764;QD=9.27;ReadPosRankSum=7.515;VQSLOD=0.6529;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:25:51.05:209,51,0	0/0:9,0:9:26.97:0,27,222	0/1:23,0:18:11.04:11,0,101	0/0:18,0:15:0.50:0,0,91	0/1:31,0:31:58.55:106,0,59	1/1:26,0:27:45.69:195,46,0	1/1:14,0:14:2.23:57,2,0	0/1:35,1:36:54.76:93,0,55	0/0:10,0:12:31.03:0,31,233	1/1:27,0:27:5.27:132,5,0	0/1:29,0:29:22.46:127,0,22	1/1:15,0:15:10.30:61,10,0	0/1:31,1:32:6.35:128,0,6	1/1:19,0:20:19.16:140,19,0	1/1:2,18:20:26.69:487,27,0	1/1:3,18:21:48.12:511,48,0	0/0:41,0:41:82.22:0,82,872	0/0:17,0:18:37.96:0,38,301	0/0:18,0:18:35.94:0,36,295	0/0:24,0:24:59.88:0,60,489	0/0:5,0:5:14.98:0,15,123	0/1:10,0:10:21.27:27,0,21	1/1:23,0:23:20.04:147,20,0	0/1:8,0:8:5.90:31,0,6	1/1:17,0:17:12.34:70,12,0	1/1:4,23:27:70.35:705,70,0	1/1:7,24:30:69.15:725,69,0	1/1:4,5:10:17.88:174,18,0
chr10	22497338	.	T	TTC	5009.22	PASS	AB=0.995;AC=18;AF=0.321;AN=56;BaseQRankSum=11.464;DP=586;FS=1.500;HRun=0;HaplotypeScore=116.2338;InbreedingCoeff=0.1574;MQ=72.15;MQ0=0;MQRankSum=-2.131;QD=16.21;ReadPosRankSum=6.154;VQSLOD=4.7010;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,23:26:60.11:976,60,0	0/0:9,0:9:27.09:0,27,400	0/0:22,0:17:35.52:0,36,382	0/0:19,0:15:8.66:0,9,242	0/1:31,0:31:91.68:378,0,92	1/1:27,0:27:47.80:466,48,0	0/1:14,0:14:38.19:176,0,38	0/1:32,0:32:67.46:386,0,67	0/0:12,0:12:36.03:0,36,480	1/1:27,0:27:6.12:507,6,0	0/1:29,0:29:26.22:464,0,26	0/1:14,0:14:11.69:151,0,12	0/1:31,0:31:99:335,0,106	0/1:19,1:20:37.33:372,0,37	0/0:20,0:20:47.55:0,48,228	0/0:21,0:21:46.61:0,47,202	0/0:41,0:41:99:0,120,1690	0/0:18,0:18:21.96:0,22,583	0/0:18,0:18:51.13:0,51,671	0/0:24,0:24:69.19:0,69,953	0/0:5,0:5:15.05:0,15,229	0/1:9,0:9:42.61:114,0,43	0/1:23,0:23:12.47:383,0,12	0/1:9,0:9:47.23:96,0,47	1/1:17,0:17:18.97:205,19,0	0/0:26,1:27:26.54:0,27,289	0/0:31,0:30:77.79:0,78,391	0/0:10,0:10:10.08:0,10,124
chr10	22500056	.	CT	C	8840.93	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=8.194;DP=497;FS=1.337;HRun=8;HaplotypeScore=48.8191;InbreedingCoeff=0.9877;MQ=72.67;MQ0=0;MQRankSum=-0.319;QD=23.96;ReadPosRankSum=1.267;VQSLOD=5.4117;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,17:18:48.08:463,48,0	0/0:7,0:7:18.06:0,18,217	0/0:13,0:12:20.15:0,20,275	0/0:10,0:7:9.88:0,10,165	1/1:2,21:23:54.08:521,54,0	1/1:2,16:18:42.06:406,42,0	1/1:0,19:19:51.08:492,51,0	1/1:3,19:22:54.08:522,54,0	0/0:17,0:17:42.13:0,42,506	1/1:4,18:22:51.07:492,51,0	1/1:1,21:22:60.09:579,60,0	1/1:2,16:18:42.07:405,42,0	1/1:4,23:27:62.46:587,62,0	1/1:3,15:18:45.07:434,45,0	1/1:2,16:18:39.06:377,39,0	1/1:4,12:16:33.05:319,33,0	0/0:17,0:18:48.12:0,48,556	0/0:9,0:9:21.06:0,21,254	0/0:15,0:15:45.14:0,45,544	0/0:30,0:30:84.24:0,84,992	0/0:9,0:9:24.07:0,24,289	1/1:2,9:11:27.04:261,27,0	1/1:1,13:14:39.06:376,39,0	1/1:0,10:10:30.05:290,30,0	1/1:4,30:34:87.14:840,87,0	1/1:2,19:21:54.08:521,54,0	1/1:1,31:32:81.13:782,81,0	1/1:0,6:6:18.03:173,18,0
chr10	22501541	.	TACACACACACACACACACAC	T	5197.99	PASS	AB=0.778;AC=15;AF=0.268;AN=56;BaseQRankSum=7.054;DP=453;FS=3.182;HRun=0;HaplotypeScore=215.3650;InbreedingCoeff=0.7261;MQ=63.24;MQ0=11;MQRankSum=-8.011;QD=38.22;ReadPosRankSum=-2.709;VQSLOD=3.8146;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:30.09:0,30,1594	0/0:5,0:5:6.02:0,6,403	0/0:16,0:12:3.01:0,3,46	0/0:12,0:10:3.90:0,4,47	0/0:23,0:23:30.10:0,30,2005	1/1:14,7:21:21.07:1096,21,0	0/1:10,4:14:15.93:310,0,16	0/0:17,0:16:6.02:0,6,311	0/0:12,0:17:33.11:0,33,2165	0/0:19,0:19:38.71:0,39,1647	0/0:6,0:9:12.04:0,12,628	1/1:16,5:21:9.03:446,9,0	1/1:12,7:19:15.05:797,15,0	1/1:8,6:13:15.05:797,15,0	0/0:13,0:16:24.08:0,24,1218	0/0:13,0:18:27.07:0,27,1499	0/0:21,0:23:39.08:0,39,2397	0/0:6,0:9:8.24:0,8,396	0/0:16,0:15:24.08:0,24,1092	0/0:26,0:25:44.49:0,44,2229	0/0:11,0:11:18.06:0,18,903	1/1:7,7:14:18.06:956,18,0	1/1:11,4:15:6.02:319,6,0	0/0:8,0:8:3.01:0,3,98	1/1:10,7:17:9.03:478,9,0	0/0:17,0:18:30.10:0,30,1636	0/0:10,0:14:14.07:0,14,502	0/0:10,0:10:12.04:0,12,243
chr10	22502735	.	AT	A	1078.55	PASS	AB=1.000;AC=15;AF=0.326;AN=46;BaseQRankSum=-2.322;DP=240;FS=10.847;HRun=13;HaplotypeScore=29.3977;InbreedingCoeff=0.4302;MQ=57.10;MQ0=7;MQRankSum=-2.322;QD=12.12;ReadPosRankSum=1.087;VQSLOD=1.9955;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	1/1:2,3:4:8.92:66,9,0	0/0:2,0:2:0:0,0,0	0/1:8,0:7:5.74:6,0,40	0/0:10,0:9:0:0,0,0	0/0:10,0:10:0:0,0,0	0/0:7,0:7:0:0,0,0	0/0:13,0:13:0:0,0,0	1/1:3,7:11:19.92:137,20,0	./.	./.	0/0:9,0:9:0:0,0,0	0/0:9,0:9:0:0,0,0	0/0:9,0:9:0:0,0,0	0/0:11,0:11:0:0,0,0	0/0:9,0:9:0:0,0,0	1/1:6,13:19:38.74:284,39,0	1/1:4,7:12:21.95:143,22,0	1/1:2,3:4:8.94:66,9,0	1/1:2,12:13:32.76:241,33,0	1/1:4,10:13:29.80:219,30,0	./.	0/0:5,0:5:0:0,0,0	./.	0/0:8,0:8:0:0,0,0	0/0:10,0:10:0.94:0,1,2	0/0:12,0:12:0:0,0,0	0/0:6,0:6:0:0,0,0
chr10	22504014	.	G	GA	5375.10	PASS	AB=0.889;AC=19;AF=0.339;AN=56;BaseQRankSum=-11.309;DP=586;FS=1.121;HRun=8;HaplotypeScore=68.1206;InbreedingCoeff=0.9213;MQ=71.68;MQ0=0;MQRankSum=-1.401;QD=27.01;ReadPosRankSum=1.496;VQSLOD=5.5486;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:69.03:0,69,632	0/1:7,1:8:13.61:14,0,144	0/0:13,0:12:26.02:0,26,220	0/0:12,0:12:22.73:0,23,169	0/0:43,0:43:99:0,111,1010	1/1:2,22:24:60.18:692,60,0	1/1:2,15:17:39.12:450,39,0	0/0:32,0:32:75.01:0,75,680	0/0:17,0:17:48.03:0,48,439	0/0:35,0:35:96.03:0,96,875	0/0:30,0:30:84.04:0,84,769	1/1:3,14:17:39.12:450,39,0	1/1:5,23:28:32.71:630,33,0	1/1:3,12:15:36.11:415,36,0	0/0:18,0:18:45:0,45,407	0/0:24,0:24:63.03:0,63,577	0/0:10,0:10:30.02:0,30,274	0/0:15,0:15:45.02:0,45,412	0/0:19,0:19:57.03:0,57,522	0/0:33,0:33:81.01:0,81,737	0/0:10,0:10:24.01:0,24,220	1/1:4,19:23:57.17:656,57,0	1/1:3,24:27:41.78:718,42,0	1/1:0,12:12:36.11:415,36,0	1/1:1,27:28:81.24:934,81,0	0/0:15,0:15:45.02:0,45,412	0/0:26,0:26:69.04:0,69,631	0/0:6,0:6:18.01:0,18,165
chr10	22504466	.	TAAAG	T	4004.75	PASS	AB=0.956;AC=21;AF=0.375;AN=56;BaseQRankSum=3.379;DP=558;FS=7.329;HRun=0;HaplotypeScore=110.5342;InbreedingCoeff=0.7850;MQ=63.23;MQ0=1;MQRankSum=3.007;QD=19.54;ReadPosRankSum=1.966;VQSLOD=3.0964;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:26:59.36:0,59,892	0/1:11,2:13:63.81:64,0,584	0/1:11,0:10:0.06:0,0,126	0/0:9,0:7:6.02:0,6,143	0/0:36,0:36:90.22:0,90,1866	1/1:6,11:17:21.07:350,21,0	1/1:4,7:11:15.05:250,15,0	0/0:30,0:30:31.75:0,32,379	0/0:14,0:14:39.10:0,39,854	0/1:28,0:28:12.09:12,0,457	0/0:21,0:21:32.10:0,32,517	1/1:2,7:9:20.96:315,21,0	1/1:3,14:18:30.10:499,30,0	1/1:4,21:25:39.13:649,39,0	0/0:22,0:22:15.02:0,15,224	0/0:12,0:12:25.78:0,26,287	0/0:25,0:25:66.16:0,66,1380	0/0:29,0:29:57.18:0,57,1326	0/0:19,0:19:24.07:0,24,514	0/0:33,0:33:73.12:0,73,1650	0/0:4,0:4:12.04:0,12,271	1/1:3,14:17:36.04:566,36,0	1/1:5,12:17:27.08:450,27,0	1/1:4,13:17:24.08:400,24,0	1/1:9,13:22:27.09:449,27,0	0/0:23,0:23:43.22:0,43,1389	0/0:38,0:38:96.30:0,96,2189	0/0:11,0:10:21.07:0,21,515
chr10	22504481	.	A	AGAAAGAAG	1497.42	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=-0.620;DP=562;FS=0.667;HRun=0;HaplotypeScore=160.2419;InbreedingCoeff=0.7474;MQ=61.59;MQ0=2;MQRankSum=-2.257;QD=28.80;ReadPosRankSum=0.859;VQSLOD=3.4487;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:27:27.06:173,0,27	0/0:12,0:12:33.07:0,33,730	0/0:21,0:12:12.70:0,13,233	0/0:23,0:8:11.77:0,12,190	0/0:36,0:36:99:0,105,2268	0/0:15,0:15:27.07:0,27,467	0/0:10,0:10:21.02:0,21,341	0/0:28,0:28:63.12:0,63,1121	0/0:16,0:16:48.12:0,48,1038	0/0:27,0:27:69.22:0,69,1570	0/0:22,0:22:57.17:0,57,1305	0/0:9,0:9:24.07:0,24,413	0/0:19,0:19:36.09:0,36,613	0/0:25,0:25:45.12:0,45,788	1/1:0,14:14:15.05:643,15,0	1/1:8,3:11:33.08:808,33,0	0/0:30,0:30:61.08:0,61,1685	0/0:23,0:23:58.42:0,58,1419	0/0:15,0:15:36.10:0,36,666	0/0:32,0:32:96.21:0,96,2006	0/0:6,0:6:18.04:0,18,345	0/0:15,0:15:41.95:0,42,707	0/0:14,0:14:31.80:0,32,582	0/0:18,0:18:36.07:0,36,576	0/0:17,0:17:33.10:0,33,587	0/0:25,0:25:75.23:0,75,1698	0/0:38,0:38:99:0,108,2509	0/0:14,0:13:32.66:0,33,673
chr10	22504612	.	CA	C	5518.58	PASS	AB=0.524;AC=31;AF=0.554;AN=56;BaseQRankSum=9.821;DP=491;FS=4.975;HRun=10;HaplotypeScore=53.1977;InbreedingCoeff=0.9278;MQ=79.20;MQ0=0;MQRankSum=-1.362;QD=20.21;ReadPosRankSum=2.024;VQSLOD=5.8233;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,14:18:38.98:338,39,0	0/0:5,0:6:14.87:0,15,147	0/0:16,1:17:7.43:0,7,232	0/0:7,0:7:8.92:0,9,81	1/1:2,25:28:74:629,74,0	1/1:4,17:21:44.97:391,45,0	1/1:1,12:13:35.99:313,36,0	1/1:5,19:24:55.21:488,55,0	0/0:7,0:7:21.06:0,21,232	1/1:1,19:20:56.96:490,57,0	1/1:5,22:27:62.96:547,63,0	1/1:3,4:7:11.99:103,12,0	1/1:4,18:22:47.98:417,48,0	1/1:3,12:16:15.81:293,16,0	1/1:2,12:14:32.99:286,33,0	0/1:1,10:11:0.19:227,0,0	0/0:18,0:18:51.12:0,51,553	0/0:11,0:12:32.90:0,33,336	0/0:25,0:25:63.16:0,63,688	0/0:35,3:38:30.12:0,30,1007	0/0:13,0:13:30.08:0,30,331	1/1:0,4:4:12:104,12,0	1/1:6,14:20:38.98:339,39,0	1/1:1,9:10:23.99:208,24,0	1/1:1,16:18:41.03:345,41,0	0/0:28,0:28:69.17:0,69,755	0/0:33,0:33:58.47:0,58,869	0/0:14,0:14:16.02:0,16,363
chr10	22507790	.	AAT	A	1489.67	PASS	AB=1.000;AC=22;AF=0.458;AN=48;BaseQRankSum=-3.331;DP=181;FS=3.557;HRun=0;HaplotypeScore=36.5759;InbreedingCoeff=0.4816;MQ=81.83;MQ0=0;MQRankSum=-0.749;QD=13.79;ReadPosRankSum=1.216;VQSLOD=2.6605;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,9:12:24.08:293,24,0	0/0:1,0:3:6.01:0,6,59	0/0:5,0:3:3.01:0,3,31	0/1:13,0:11:7.72:8,0,24	1/1:2,6:8:14.95:149,15,0	1/1:2,10:12:27.08:329,27,0	1/1:0,2:2:6.02:73,6,0	0/1:27,0:27:99:135,0,160	0/0:0,0:3:9:0,9,79	0/1:5,0:5:17.82:18,0,58	0/0:7,0:7:5.90:0,6,37	./.	1/1:0,5:5:15.05:183,15,0	1/1:2,4:7:14.88:161,15,0	0/0:9,0:9:27.09:0,27,438	0/0:3,0:3:6.02:0,6,97	0/0:4,0:13:21.02:0,21,230	0/0:2,0:5:11.91:0,12,92	0/0:2,0:5:11.99:0,12,124	0/1:1,0:3:4.48:4,0,13	./.	./.	1/1:2,2:4:6.02:73,6,0	1/1:0,1:1:3.01:37,3,0	1/1:2,6:9:17.89:197,18,0	0/0:3,0:5:3.89:0,4,28	0/0:7,0:8:3:0,3,26	./.
chr10	22507805	.	A	ATG	1625.50	PASS	AB=1.000;AC=16;AF=0.308;AN=52;BaseQRankSum=-2.766;DP=181;FS=12.298;HRun=0;HaplotypeScore=37.7885;InbreedingCoeff=0.0724;MQ=78.88;MQ0=0;MQRankSum=-0.093;QD=17.48;ReadPosRankSum=-0.483;VQSLOD=1.8296;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:11,0:11:34.17:34,0,74	0/1:3,0:3:16.36:25,0,16	0/0:5,0:3:2.99:0,3,31	0/0:11,0:9:1:0,1,84	0/0:7,0:7:7.54:0,8,82	0/0:14,0:14:31.79:0,32,185	0/0:3,0:3:8.74:0,9,55	1/1:2,24:26:63.62:1028,64,0	0/1:4,0:4:12.98:58,0,13	1/1:0,6:6:18.04:310,18,0	1/1:0,7:8:6.02:115,6,0	0/0:1,0:1:2.99:0,3,24	0/0:6,0:6:17.37:0,17,101	0/0:9,0:9:23.46:0,23,156	0/0:11,0:11:33.08:0,33,460	0/0:2,0:2:6.02:0,6,91	0/1:14,0:14:78.73:79,0,92	0/1:4,0:4:12.98:60,0,13	0/1:6,0:6:26.49:26,0,83	0/1:4,0:4:31.09:31,0,38	./.	0/0:1,0:1:3:0,3,25	0/1:4,0:4:4.93:5,0,54	0/0:2,0:2:2.88:0,3,15	0/0:9,0:9:11.48:0,11,120	1/1:3,0:2:2.51:7,3,0	0/0:5,0:5:2.12:0,2,63	./.
chr10	22508447	.	AT	A	490.26	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.401;DP=528;FS=0.000;HRun=11;HaplotypeScore=57.3644;InbreedingCoeff=0.7847;MQ=67.57;MQ0=0;MQRankSum=-0.216;QD=13.62;ReadPosRankSum=2.483;VQSLOD=3.7154;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:13,1:14:8.42:0,8,287	0/0:10,0:10:21.05:0,21,224	0/0:15,0:13:13.57:0,14,121	0/0:7,0:6:9.47:0,9,83	0/0:22,0:25:53.89:0,54,533	0/0:32,0:33:90.06:0,90,917	0/0:13,0:14:33.08:0,33,347	0/0:21,0:21:39.06:0,39,393	0/0:11,1:12:5.42:0,5,252	0/0:28,0:27:63.13:0,63,650	0/0:28,1:29:53.55:0,54,768	0/0:21,0:21:57.12:0,57,594	0/0:21,2:23:29.16:0,29,512	0/0:24,0:24:60.14:0,60,632	1/1:2,18:20:20.35:363,20,0	1/1:5,11:16:29.95:246,30,0	0/0:19,0:19:49.93:0,50,510	0/0:15,0:15:45.11:0,45,476	0/0:18,0:19:32.89:0,33,318	0/0:23,0:23:60.12:0,60,615	0/0:16,0:16:42.09:0,42,435	0/0:19,0:19:48.08:0,48,484	0/0:13,0:13:30.06:0,30,308	0/0:10,1:11:8.43:0,8,288	0/0:24,1:25:32.49:0,32,530	0/0:32,0:32:75.16:0,75,782	0/0:21,0:22:60.02:0,60,621	0/0:2,0:2:2.99:0,3,24
chr10	22509926	.	AT	A	2705.39	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=10.175;DP=360;FS=12.390;HRun=9;HaplotypeScore=41.9583;InbreedingCoeff=0.9456;MQ=69.83;MQ0=0;MQRankSum=-1.205;QD=22.73;ReadPosRankSum=0.337;VQSLOD=3.2544;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:57.64:0,58,659	0/0:3,0:3:9.03:0,9,104	0/0:8,0:8:15.01:0,15,154	0/0:5,0:5:11.52:0,12,111	0/0:17,0:17:51.15:0,51,589	0/0:20,0:20:54.16:0,54,623	0/0:4,0:4:12.04:0,12,138	1/1:7,23:30:68.95:614,69,0	0/0:7,0:7:21.06:0,21,242	1/1:3,13:16:39.01:357,39,0	1/1:0,19:19:54.02:494,54,0	0/0:11,0:11:30.09:0,30,346	0/0:8,0:8:18.05:0,18,208	0/0:12,0:12:33.10:0,33,381	0/0:16,0:16:45.12:0,45,509	0/0:6,0:6:18.05:0,18,208	0/0:15,0:15:42.12:0,42,485	0/0:14,0:14:42.12:0,42,483	0/0:8,0:8:24.07:0,24,277	0/0:20,0:20:57.17:0,57,658	0/0:2,0:2:6.02:0,6,69	0/0:7,0:7:21.06:0,21,242	0/0:9,0:9:27.08:0,27,312	0/0:9,0:9:21.06:0,21,242	0/0:17,0:17:45.13:0,45,519	1/1:1,27:28:81.04:741,81,0	1/1:0,11:11:33.02:302,33,0	1/1:1,14:15:42.02:384,42,0
chr10	22512861	.	T	TC	8649	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=16.743;DP=626;FS=1.770;HRun=0;HaplotypeScore=78.8804;InbreedingCoeff=0.9996;MQ=85.03;MQ0=0;MQRankSum=1.133;QD=41.19;ReadPosRankSum=1.368;VQSLOD=5.5434;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:48.16:0,48,670	0/0:14,0:14:42.14:0,42,587	0/0:21,0:21:46.30:0,46,717	0/0:17,0:17:42.12:0,42,568	0/0:35,0:35:99:0,105,1468	0/0:25,0:25:75.20:0,75,1011	0/0:18,0:18:51.17:0,51,712	1/1:0,36:36:99:1569,108,0	0/0:17,0:17:48.16:0,48,671	1/1:2,25:27:79.81:1144,80,0	1/1:0,25:26:75.23:1089,75,0	0/0:22,0:22:66.22:0,66,921	0/0:16,0:16:48.16:0,48,671	0/0:31,0:31:93.31:0,93,1300	1/1:0,25:26:78.25:1150,78,0	1/1:0,20:20:51.17:748,51,0	0/0:17,0:17:51.17:0,51,713	0/0:8,0:8:24.08:0,24,335	0/0:20,0:20:60.20:0,60,838	0/0:21,0:21:63.21:0,63,881	0/0:28,0:28:84.28:0,84,1174	0/0:26,0:26:78.26:0,78,1091	0/0:25,0:25:72.24:0,72,1007	0/0:15,0:15:45.15:0,45,629	0/0:22,0:22:66.21:0,66,908	1/1:0,23:23:69.17:1002,69,0	1/1:1,34:36:87.28:1279,87,0	1/1:0,16:16:45.15:669,45,0
chr10	22514002	.	CT	C	897.36	PASS	AB=0.923;AC=11;AF=0.196;AN=56;BaseQRankSum=6.787;DP=354;FS=28.967;HRun=10;HaplotypeScore=44.8408;InbreedingCoeff=0.8648;MQ=63.45;MQ0=6;MQRankSum=-2.203;QD=11.81;ReadPosRankSum=-0.748;VQSLOD=0.6989;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:21:24.04:0,24,467	0/0:7,0:7:15.04:0,15,166	0/0:11,0:8:17.96:0,18,160	0/0:4,0:2:3.01:0,3,31	0/0:19,1:20:28.07:0,28,522	0/0:8,0:8:23.99:0,24,239	0/0:13,0:13:28.63:0,29,327	1/1:19,0:19:40.31:289,40,0	0/0:20,0:19:51.10:0,51,550	1/1:16,0:16:40.74:284,41,0	1/1:9,0:9:23.56:150,24,0	0/0:7,0:7:15.04:0,15,166	0/1:11,1:12:2.16:2,0,189	0/0:7,0:7:18.05:0,18,199	1/1:5,4:9:26.37:191,26,0	1/1:7,4:11:22.80:154,23,0	0/0:16,1:16:13.07:0,13,372	0/0:11,0:11:27.07:0,27,298	0/0:16,0:15:26.58:0,27,298	0/0:15,1:16:16.06:0,16,405	0/0:7,0:7:18.05:0,18,199	0/0:9,0:9:21.06:0,21,232	0/0:4,0:5:14.86:0,15,138	0/0:11,0:11:24.02:0,24,252	0/0:12,0:12:33.05:0,33,351	0/0:21,0:20:32.91:0,33,519	0/0:24,0:24:28.93:0,29,527	0/0:9,0:8:23.93:0,24,247
chr10	22514018	.	T	TC	753.79	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=8.661;DP=340;FS=15.105;HRun=0;HaplotypeScore=43.6588;InbreedingCoeff=0.5210;MQ=53.38;MQ0=17;MQRankSum=0.183;QD=8.87;ReadPosRankSum=1.296;VQSLOD=1.5458;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:17:48.09:0,48,613	0/0:5,0:5:15.05:0,15,209	0/0:5,0:3:8.71:0,9,67	0/0:4,0:2:2.37:0,2,8	0/0:23,0:22:60.20:0,60,834	0/0:9,0:9:26.88:0,27,348	0/0:16,0:15:38.84:0,39,429	0/1:14,0:14:11.66:12,0,19	0/0:19,0:18:45.15:0,45,627	0/0:19,0:19:4.91:0,5,63	0/0:10,0:10:4.06:0,4,11	0/0:8,0:8:21.07:0,21,288	0/0:13,0:12:33.05:0,33,434	0/0:6,0:6:15.01:0,15,188	1/1:6,3:9:27.06:324,27,0	1/1:7,4:11:32.99:388,33,0	0/0:17,0:15:42.06:0,42,513	0/0:9,0:9:24.04:0,24,298	0/0:15,0:13:33.07:0,33,425	0/0:15,0:15:45.13:0,45,598	0/0:6,0:6:18.06:0,18,251	0/0:9,0:8:24.07:0,24,319	0/0:4,0:4:12.04:0,12,166	0/0:13,0:11:24.08:0,24,335	0/0:11,0:11:30.09:0,30,389	1/1:18,0:16:30.77:102,31,0	0/1:22,0:21:63.27:63,0,81	0/1:11,0:8:20.95:21,0,30
chr10	22521091	.	G	GGT	829.40	PASS	AB=0.917;AC=7;AF=0.125;AN=56;BaseQRankSum=4.544;DP=542;FS=13.840;HRun=0;HaplotypeScore=83.0789;InbreedingCoeff=0.6933;MQ=47.85;MQ0=51;MQRankSum=-1.309;QD=16.59;ReadPosRankSum=-0.711;VQSLOD=2.4761;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:38:72.24:0,72,1173	0/0:13,0:12:21.07:0,21,342	0/0:9,0:3:9.03:0,9,147	0/0:13,0:5:15.05:0,15,235	0/0:22,0:20:42.14:0,42,679	0/0:18,0:14:33.11:0,33,535	0/0:36,0:27:48.13:0,48,752	1/1:6,2:1:3.01:58,3,0	0/0:14,0:11:24.08:0,24,390	1/1:0,14:14:39.13:722,39,0	1/1:1,4:4:5.95:117,6,0	0/0:25,0:25:60.20:0,60,972	0/0:26,0:25:53.79:0,54,876	0/0:18,0:18:36.12:0,36,584	0/0:24,0:21:57.19:0,57,927	0/0:19,0:18:45.15:0,45,733	0/0:30,0:28:69.24:0,69,1125	0/0:11,0:10:12.04:0,12,196	0/0:20,0:14:33.09:0,33,511	0/0:13,0:11:21.07:0,21,341	0/0:45,0:40:90.28:0,90,1419	0/0:14,0:11:27.09:0,27,440	0/0:19,0:16:30.07:0,30,461	0/0:26,0:25:48.16:0,48,778	0/0:11,0:10:15.04:0,15,221	0/1:20,2:19:64.12:64,0,680	0/0:14,0:14:42.14:0,42,681	0/0:8,0:8:15.05:0,15,245
chr10	22522902	.	G	GT	2457.77	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=6.414;DP=604;FS=5.637;HRun=8;HaplotypeScore=71.9872;InbreedingCoeff=0.9933;MQ=75.23;MQ0=0;MQRankSum=-0.532;QD=19.05;ReadPosRankSum=1.734;VQSLOD=3.6546;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,15:22:44.87:519,45,0	0/0:8,0:8:21:0,21,192	0/0:21,0:19:20.44:0,20,231	0/0:11,0:11:14.25:0,14,182	0/0:24,0:24:66.04:0,66,604	0/0:29,0:29:75.02:0,75,681	0/0:10,0:10:23.98:0,24,214	0/0:42,0:42:99:0,100,903	0/0:19,0:19:54.03:0,54,493	0/0:37,0:37:98.37:0,98,899	0/0:36,0:36:96.01:0,96,867	0/0:12,0:12:27.01:0,27,247	0/0:33,0:33:93.04:0,93,847	0/0:15,0:15:33.01:0,33,302	1/1:2,0:21:39.53:198,40,0	1/1:5,0:30:45.93:323,46,0	0/0:15,0:15:39.02:0,39,357	0/0:16,0:16:30:0,30,275	0/0:20,0:20:48.02:0,48,439	0/0:20,0:20:51.02:0,51,467	0/0:17,0:17:33.01:0,33,302	0/0:34,0:34:87.04:0,87,796	0/0:24,0:24:63.02:0,63,572	0/0:15,0:15:42.02:0,42,384	0/0:17,0:17:51.03:0,51,467	1/1:2,17:19:29.70:595,30,0	1/1:3,22:25:35.72:665,36,0	1/1:2,10:12:30.09:346,30,0
chr10	22523089	.	C	CA	8427.93	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-4.440;DP=568;FS=0.000;HRun=0;HaplotypeScore=55.5645;InbreedingCoeff=0.9979;MQ=87.25;MQ0=0;MQRankSum=-2.587;QD=43.22;ReadPosRankSum=1.059;VQSLOD=5.1619;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:33.11:0,33,461	0/0:7,0:7:21.07:0,21,294	0/0:17,0:17:51.17:0,51,694	0/0:22,0:22:57.01:0,57,738	0/0:28,0:28:84.25:0,84,1137	0/0:27,0:27:78.26:0,78,1091	0/0:13,0:13:39.13:0,39,544	1/1:0,28:28:84.27:1318,84,0	0/0:15,0:15:42.14:0,42,587	1/1:0,25:25:72.25:1147,72,0	1/1:0,22:22:51.17:815,51,0	0/0:16,0:16:45.15:0,45,629	0/0:25,0:25:75.25:0,75,1048	0/0:28,0:28:81.26:0,81,1115	1/1:1,25:26:69.24:1102,69,0	1/1:1,26:27:69.24:1099,69,0	0/0:18,0:18:54.16:0,54,736	0/0:6,0:6:18.06:0,18,252	0/0:13,0:13:39.12:0,39,530	0/0:30,0:30:87.28:0,87,1199	0/0:17,0:17:51.14:0,51,678	0/0:20,0:20:57.19:0,57,794	0/0:23,0:23:69.22:0,69,947	0/0:13,0:13:39.08:0,39,507	0/0:21,0:21:63.18:0,63,847	1/1:0,26:26:78.24:1221,78,0	1/1:0,22:22:56.98:911,57,0	1/1:0,19:19:51.17:815,51,0
chr10	22523250	.	TTGTG	T	1543.29	PASS	AB=0.788;AC=22;AF=0.423;AN=52;BaseQRankSum=0.019;DP=528;FS=4.039;HRun=0;HaplotypeScore=111.2810;InbreedingCoeff=0.4389;MQ=64.72;MQ0=15;MQRankSum=-0.421;QD=5.57;ReadPosRankSum=1.660;VQSLOD=2.2374;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:21,4:23:2.96:47,3,0	0/1:6,0:7:12.53:21,0,13	./.	./.	0/0:18,0:17:21.05:0,21,322	0/1:13,9:21:55.67:172,0,56	1/1:16,5:22:12.03:169,12,0	0/0:19,0:19:18.02:0,18,224	0/0:15,0:17:9.48:0,9,39	0/0:15,0:14:12.02:0,12,190	0/0:29,0:28:30.07:0,30,504	1/1:14,3:17:18.02:254,18,0	1/1:4,6:11:15.04:215,15,0	0/1:12,8:23:0.90:238,0,1	0/0:18,0:20:35.08:0,35,461	0/0:20,0:24:21.06:0,21,308	0/1:13,1:16:29.34:29,0,111	0/0:14,0:19:23.01:0,23,244	0/0:18,0:19:5.75:0,6,61	0/0:12,0:13:14.49:0,14,115	0/0:9,0:10:2.74:0,3,12	1/1:18,8:27:16.23:190,16,0	1/1:14,6:20:12.04:187,12,0	0/0:9,0:14:5.12:0,5,24	0/1:16,0:27:13.91:14,0,35	0/1:23,0:23:37.50:38,0,85	1/1:20,0:20:6.26:46,6,0	1/1:13,0:13:19.92:106,20,0
chr10	22523291	.	TGTGCAC	T	3872.27	PASS	AB=1.000;AC=12;AF=0.214;AN=56;BaseQRankSum=2.679;DP=451;FS=11.907;HRun=0;HaplotypeScore=109.6460;InbreedingCoeff=0.5017;MQ=55.79;MQ0=17;MQRankSum=-2.839;QD=25.99;ReadPosRankSum=0.636;VQSLOD=2.8560;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:14:21.07:0,21,424	0/0:6,0:5:15.05:0,15,314	0/0:11,0:1:3.01:0,3,57	0/0:24,0:9:26.45:0,26,440	0/0:17,0:17:30.10:0,30,893	0/0:24,0:23:51.09:0,51,1083	0/0:18,0:18:35.75:0,36,628	0/1:17,0:17:26.19:490,0,26	0/0:15,0:15:30.57:0,31,610	1/1:13,0:13:6.58:413,7,0	0/1:24,0:23:10.16:463,0,10	0/0:11,0:10:19.50:0,20,312	0/0:11,0:11:11.49:0,11,324	0/0:17,0:17:25.45:0,25,588	0/1:23,0:21:51.07:255,0,51	0/1:21,0:21:78.92:301,0,79	0/0:16,0:16:42.14:0,42,923	0/0:16,0:16:41.31:0,41,861	0/0:14,0:13:34.47:0,34,831	0/0:12,0:11:30.10:0,30,645	0/0:5,0:5:6.02:0,6,119	0/0:18,0:18:21.59:0,22,653	0/0:15,0:15:39.11:0,39,754	0/0:13,0:13:23.73:0,24,493	0/0:24,0:23:30.12:0,30,735	1/1:3,15:18:28.27:972,28,0	1/1:1,14:15:11.01:432,11,0	1/1:2,16:18:24.08:547,24,0
chr10	22523293	.	TGCAC	T	4148.16	PASS	AB=0.957;AC=15;AF=0.268;AN=56;BaseQRankSum=4.306;DP=450;FS=2.779;HRun=0;HaplotypeScore=95.7149;InbreedingCoeff=0.8659;MQ=57.26;MQ0=16;MQRankSum=-0.845;QD=27.84;ReadPosRankSum=0.948;VQSLOD=3.5619;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:24.07:0,24,492	0/0:6,0:5:15.05:0,15,299	0/0:12,0:2:6.02:0,6,124	0/0:24,0:9:26.45:0,26,440	0/0:13,0:15:30.10:0,30,767	0/0:25,0:24:53.67:0,54,1091	0/0:17,0:17:35.92:0,36,613	1/1:6,10:16:30.09:532,30,0	0/0:14,0:14:30.08:0,30,603	1/1:11,2:13:32.94:503,33,0	1/1:24,0:23:48.35:616,48,0	0/0:11,0:10:26.95:0,27,340	0/0:11,0:11:13.69:0,14,291	0/0:17,0:17:38.88:0,39,572	1/1:20,3:21:25.86:554,26,0	0/1:21,1:22:20.51:535,0,21	0/0:16,0:16:42.13:0,42,879	0/0:16,0:16:38.34:0,38,718	0/0:14,0:13:33.05:0,33,801	0/0:12,0:11:33.11:0,33,697	0/0:5,0:5:6.02:0,6,116	0/0:19,0:19:39:0,39,684	0/0:15,0:15:38.86:0,39,687	0/0:13,0:13:23.71:0,24,489	0/0:24,0:23:42.04:0,42,826	1/1:17,1:18:51.16:826,51,0	1/1:15,0:15:18.06:246,18,0	1/1:18,0:18:24.08:336,24,0
chr10	22523294	.	GCA	G	2338.07	PASS	AB=0.909;AC=15;AF=0.268;AN=56;BaseQRankSum=8.332;DP=440;FS=2.807;HRun=0;HaplotypeScore=85.7594;InbreedingCoeff=0.9075;MQ=59.08;MQ0=14;MQRankSum=-1.758;QD=16.35;ReadPosRankSum=0.901;VQSLOD=3.6886;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:23.08:0,23,352	0/0:6,0:5:14.64:0,15,196	0/0:13,0:3:9.03:0,9,134	0/0:24,0:9:26.45:0,26,378	0/0:14,0:14:30.10:0,30,521	0/0:25,0:24:53.89:0,54,810	0/0:16,0:16:36.09:0,36,477	1/1:14,1:15:27.55:308,28,0	0/0:13,0:13:28.41:0,28,389	1/1:11,2:13:32.83:336,33,0	1/1:21,2:22:48.41:450,48,0	0/0:10,0:10:27.06:0,27,333	0/0:11,0:11:22.59:0,23,273	0/0:17,0:17:38.92:0,39,464	1/1:20,1:20:34.43:391,34,0	0/1:18,2:20:2.65:390,0,3	0/0:16,0:16:41.90:0,42,566	0/0:15,0:15:35.69:0,36,409	0/0:14,0:13:33.06:0,33,559	0/0:12,0:11:32.94:0,33,459	0/0:5,0:5:5.93:0,6,67	0/0:19,0:19:39.06:0,39,541	0/0:15,0:15:39.13:0,39,565	0/0:12,0:12:23.67:0,24,306	0/0:24,0:23:41.77:0,42,526	1/1:18,0:18:48.08:435,48,0	1/1:15,0:15:17.28:91,17,0	1/1:18,0:18:23.16:137,23,0
chr10	22524533	.	A	AT	3108.41	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-12.279;DP=580;FS=4.840;HRun=3;HaplotypeScore=51.4215;InbreedingCoeff=0.9956;MQ=84.12;MQ0=0;MQRankSum=-4.169;QD=37.45;ReadPosRankSum=-1.797;VQSLOD=3.4029;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:60.16:0,60,707	0/0:13,0:13:39.12:0,39,468	0/0:20,0:20:57.14:0,57,666	0/0:16,0:16:45.11:0,45,513	0/0:35,0:35:99:0,102,1224	0/0:24,0:24:69.21:0,69,827	0/0:19,0:19:48.15:0,48,576	1/1:2,21:23:63.20:866,63,0	0/0:22,0:22:60.17:0,60,709	1/1:3,34:37:99:1461,105,0	1/1:1,22:23:66.22:924,66,0	0/0:24,0:24:72.22:0,72,864	0/0:21,0:21:63.19:0,63,756	0/0:17,0:17:48.13:0,48,564	0/0:19,0:19:54.16:0,54,648	0/0:17,0:17:45.13:0,45,529	0/0:16,0:16:48.15:0,48,576	0/0:6,0:6:18.02:0,18,201	0/0:22,0:22:51.16:0,51,612	0/0:27,0:27:72.22:0,72,863	0/0:7,0:7:21.07:0,21,258	0/0:21,0:21:60.18:0,60,719	0/0:23,0:23:69.20:0,69,817	0/0:15,0:15:42.13:0,42,504	0/0:17,0:17:51.14:0,51,599	0/0:24,0:24:72.22:0,72,864	0/0:28,0:28:84.25:0,84,997	0/0:22,0:22:63.19:0,63,755
chr10	22526193	.	CATG	C	1925.35	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.717;DP=568;FS=0.573;HRun=0;HaplotypeScore=79.2311;InbreedingCoeff=0.9953;MQ=82.25;MQ0=0;MQRankSum=-2.334;QD=37.75;ReadPosRankSum=2.967;VQSLOD=4.3118;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:60.21:0,60,1319	0/0:12,0:12:33.11:0,33,686	0/0:18,0:18:42.14:0,42,817	0/0:13,0:13:36.09:0,36,579	0/0:25,0:25:66.23:0,66,1427	0/0:23,0:23:66.23:0,66,1452	0/0:17,0:17:48.16:0,48,1024	0/0:24,0:24:60.20:0,60,1189	0/0:11,0:11:30.09:0,30,603	0/0:34,0:34:90.31:0,90,1950	0/0:32,0:32:90.25:0,90,1872	0/0:21,0:21:60.21:0,60,1281	0/0:23,0:23:63.22:0,63,1362	0/0:18,0:18:51.17:0,51,1088	0/0:18,0:18:51.18:0,51,1122	0/0:13,0:13:39.13:0,39,841	0/0:19,0:19:57.20:0,57,1235	0/0:15,0:15:33.11:0,33,694	0/0:21,0:21:51.17:0,51,1070	0/0:28,0:28:72.25:0,72,1551	0/0:20,0:20:57.18:0,57,1182	0/0:18,0:18:54.19:0,54,1171	0/0:30,0:30:87.28:0,87,1794	0/0:18,0:18:51.18:0,51,1122	0/0:25,0:25:75.23:0,75,1553	1/1:3,21:24:16.77:959,17,0	1/1:1,17:18:42.14:674,42,0	1/1:0,9:9:27.09:434,27,0
chr10	22530345	.	T	TC	9535.96	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-16.260;DP=715;FS=1.703;HRun=1;HaplotypeScore=66.7971;InbreedingCoeff=0.9999;MQ=88.16;MQ0=1;MQRankSum=-2.942;QD=41.10;ReadPosRankSum=2.086;VQSLOD=5.5374;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:20:60.19:0,60,778	0/0:11,0:11:33.11:0,33,428	0/0:29,0:29:74.78:0,75,907	0/0:29,0:28:76.56:0,77,934	0/0:32,0:32:93.30:0,93,1207	0/0:28,0:28:81.25:0,81,1037	0/0:23,0:23:66.21:0,66,857	1/1:2,22:24:63.21:937,63,0	0/0:27,0:27:81.26:0,81,1050	1/1:1,39:40:99:1694,114,0	1/1:0,28:28:72.24:1079,72,0	0/0:22,0:22:66.19:0,66,830	0/0:34,0:34:99:0,102,1293	0/0:29,0:29:87.28:0,87,1129	1/1:1,34:35:99:1529,102,0	1/1:0,24:24:72.24:1079,72,0	0/0:21,0:21:63.20:0,63,817	0/0:13,0:13:33.11:0,33,427	0/0:16,0:16:48.16:0,48,623	0/0:42,0:42:99:0,123,1582	0/0:26,0:26:78.23:0,78,993	0/0:23,0:23:69.22:0,69,895	0/0:15,0:15:45.15:0,45,584	0/0:21,0:21:57.17:0,57,725	0/0:21,0:21:63.20:0,63,818	1/1:0,29:29:87.29:1299,87,0	1/1:2,32:33:90.30:1335,90,0	1/1:2,16:18:39.13:585,39,0
chr10	22531297	.	G	GT	2675.29	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=11.322;DP=632;FS=1.601;HRun=0;HaplotypeScore=67.0027;InbreedingCoeff=0.9983;MQ=89.88;MQ0=1;MQRankSum=-2.998;QD=39.34;ReadPosRankSum=1.847;VQSLOD=4.3043;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:75.19:0,75,977	0/0:12,0:12:30.08:0,30,385	0/0:25,0:25:58.54:0,59,875	0/0:23,0:23:58.69:0,59,719	0/0:18,0:18:51.14:0,51,676	0/0:27,0:27:78.23:0,78,1040	0/0:27,0:27:81.26:0,81,1114	0/0:23,0:23:66.21:0,66,893	0/0:19,0:19:57.17:0,57,778	0/0:22,0:22:63.20:0,63,852	0/0:13,0:13:39.11:0,39,512	0/0:22,0:22:66.22:0,66,922	0/0:32,0:31:93.30:0,93,1275	0/0:28,0:28:81.26:0,81,1111	0/0:25,0:25:75.24:0,75,1031	0/0:24,0:24:72.23:0,72,989	0/0:23,0:23:63.17:0,63,843	0/0:8,0:8:20.98:0,21,268	0/0:19,0:19:57.15:0,57,733	0/0:34,0:34:96.31:0,96,1326	0/0:19,0:19:57.17:0,57,777	0/0:16,0:16:45.13:0,45,610	0/0:28,0:28:80.77:0,81,1104	0/0:25,0:25:72.24:0,72,1006	0/0:26,0:26:78.20:0,78,1006	1/1:0,20:20:57.19:847,57,0	1/1:0,32:32:84.08:1266,84,0	1/1:1,15:16:48.16:705,48,0
chr10	22533713	.	C	CT	7913.88	PASS	AC=28;AF=0.519;AN=54;BaseQRankSum=2.483;DP=503;FS=8.425;HRun=8;HaplotypeScore=96.5189;InbreedingCoeff=0.9965;MQ=67.22;MQ0=0;MQRankSum=-8.904;QD=28.88;ReadPosRankSum=-0.405;VQSLOD=4.0888;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:51.01:0,51,466	0/0:7,0:7:18.01:0,18,164	0/0:18,0:19:22.84:0,23,242	0/0:13,0:11:23.42:0,23,213	1/1:7,17:24:48.14:554,48,0	1/1:2,22:24:66.20:761,66,0	1/1:0,10:10:30.09:346,30,0	1/1:7,26:33:87.26:1000,87,0	0/0:16,0:16:45.02:0,45,412	1/1:3,18:21:57.17:655,57,0	1/1:4,14:18:48.13:544,48,0	1/1:4,13:17:45.12:509,45,0	1/1:8,16:24:54.09:593,54,0	1/1:4,9:13:33.02:362,33,0	1/1:4,12:16:45.02:475,45,0	1/1:5,17:22:60.14:676,60,0	0/0:18,0:18:51.02:0,51,466	0/0:14,0:14:33.01:0,33,302	0/0:21,0:21:51.02:0,51,464	0/0:28,0:28:78.03:0,78,714	0/0:7,0:7:21.01:0,21,192	1/1:0,8:8:24.07:277,24,0	1/1:8,18:26:57.12:634,57,0	./.	1/1:5,13:18:50.97:528,51,0	0/0:23,1:24:34.46:0,34,578	0/0:31,0:31:80.92:0,81,715	0/0:7,0:7:21.01:0,21,192
chr10	22533744	.	T	TCTC	21251.41	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-1.168;DP=509;FS=24.991;HRun=0;HaplotypeScore=78.6289;InbreedingCoeff=0.9795;MQ=69.90;MQ0=0;MQRankSum=-9.414;QD=58.54;ReadPosRankSum=1.679;VQSLOD=3.9913;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,16:17:45.11:968,45,0	0/0:11,0:11:33.10:0,33,524	0/0:15,0:15:42.11:0,42,648	0/0:9,0:9:21.07:0,21,336	1/1:4,19:24:57.18:1204,57,0	1/1:2,16:18:54.17:1160,54,0	1/1:6,5:11:24.08:506,24,0	1/1:10,14:24:66.20:1305,66,0	0/0:17,0:17:48.16:0,48,797	1/1:2,20:23:63.22:1341,63,0	1/1:4,14:19:51.17:1068,51,0	1/1:4,18:22:57.17:1177,57,0	1/1:1,19:20:60.21:1338,60,0	1/1:0,17:17:51.18:1148,51,0	1/1:0,18:18:45.15:1015,45,0	1/1:0,25:25:72.25:1626,72,0	0/0:16,0:16:45.09:0,45,689	0/0:23,0:23:69.20:0,69,1096	0/0:19,0:19:57.19:0,57,921	0/0:30,0:30:90.28:0,90,1446	0/0:5,0:5:9.02:0,9,127	1/1:0,11:12:33.11:743,33,0	1/1:1,19:20:51.18:1146,51,0	1/1:0,3:3:9.03:204,9,0	1/1:1,18:19:54.19:1218,54,0	1/1:4,26:32:78.25:1642,78,0	1/1:0,32:33:90.31:2035,90,0	1/1:0,6:6:18.06:407,18,0
chr10	22533897	.	TGC	T	2649.46	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=11.299;DP=546;FS=2.356;HRun=0;HaplotypeScore=71.0298;InbreedingCoeff=0.9734;MQ=80.09;MQ0=0;MQRankSum=-3.463;QD=44.91;ReadPosRankSum=1.236;VQSLOD=5.1250;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:36.12:0,36,732	0/0:5,0:5:15.05:0,15,293	0/0:16,0:16:48.15:0,48,927	0/0:13,0:13:39.13:0,39,792	0/0:31,0:31:93.32:0,93,1878	0/0:22,0:22:66.23:0,66,1335	0/0:3,0:3:9.03:0,9,183	0/0:34,0:34:99:0,102,2057	0/0:22,0:22:66.21:0,66,1305	0/0:26,0:26:78.27:0,78,1578	0/0:28,0:28:84.26:0,84,1632	0/0:26,0:26:78.25:0,78,1543	0/0:31,0:31:90.30:0,90,1773	0/0:14,0:14:39.12:0,39,754	0/0:25,0:25:75.26:0,75,1522	0/0:23,0:23:63.22:0,63,1279	0/0:20,0:20:60.21:0,60,1219	0/0:11,0:11:30.09:0,30,550	0/0:15,0:15:45.15:0,45,887	0/0:19,0:19:54.17:0,54,1061	0/0:24,0:24:72.25:0,72,1436	0/0:11,0:11:33.11:0,33,668	0/0:22,0:22:63.18:0,63,1207	0/0:14,0:14:42.14:0,42,853	0/0:19,0:19:57.18:0,57,1102	1/1:0,30:30:90.31:1436,90,0	1/1:0,20:20:57.19:930,57,0	1/1:0,9:9:27.09:427,27,0
chr10	22534627	.	GGAGGAGGAAC	G	1203.55	PASS	AC=8;AF=0.148;AN=54;BaseQRankSum=8.442;DP=684;FS=6.424;HRun=0;HaplotypeScore=196.2371;InbreedingCoeff=0.8077;MQ=67.87;MQ0=12;MQRankSum=-3.708;QD=16.49;ReadPosRankSum=-0.654;VQSLOD=2.1097;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:84.12:0,84,2551	0/0:12,0:12:33.03:0,33,709	0/0:42,0:28:28.47:0,28,388	0/0:58,0:30:24.28:0,24,199	0/0:18,0:18:39.01:0,39,1178	0/0:26,0:26:57.06:0,57,1632	0/0:38,0:38:71.82:0,72,1655	./.	0/0:29,0:29:63.22:0,63,2536	0/0:10,0:10:1.88:0,2,15	1/1:19,0:19:0.89:2,1,0	0/0:24,0:24:56.83:0,57,1737	0/0:22,0:22:40.31:0,40,1034	0/0:37,0:37:81.13:0,81,2458	0/0:41,0:41:83.84:0,84,2226	0/0:26,0:26:63.04:0,63,2060	0/0:18,0:18:30.08:0,30,887	0/0:16,0:16:39.07:0,39,1092	0/0:20,0:19:42.11:0,42,1456	0/0:27,0:27:59.86:0,60,1490	0/0:27,0:27:63.19:0,63,2237	0/0:24,0:23:45.08:0,45,1248	0/0:17,0:17:43.95:0,44,1559	0/0:19,0:19:51.08:0,51,1711	0/0:18,0:18:48.07:0,48,1237	1/1:7,14:21:45.12:1088,45,0	1/1:4,20:24:8.48:200,8,0	1/1:0,9:9:3.01:39,3,0
chr10	22534646	.	AC	A	543.47	PASS	AB=0.940;AC=8;AF=0.143;AN=56;BaseQRankSum=8.244;DP=654;FS=1.642;HRun=1;HaplotypeScore=91.8245;InbreedingCoeff=0.6572;MQ=72.48;MQ0=7;MQRankSum=-0.924;QD=7.55;ReadPosRankSum=-3.168;VQSLOD=-0.3257;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,1:40:66.83:0,67,1556	0/0:13,0:13:36.10:0,36,548	0/0:39,1:33:47.87:0,48,919	0/0:52,0:31:64.67:0,65,761	0/0:18,0:18:45.15:0,45,713	0/0:25,0:25:65.94:0,66,1037	0/0:32,0:32:51.63:0,52,1355	1/1:0,10:10:27.05:325,27,0	0/0:23,0:23:66.23:0,66,1052	1/1:10,0:10:18.06:251,18,0	1/1:19,0:19:5.98:62,6,0	0/0:20,0:20:57.19:0,57,908	0/0:18,0:18:45.14:0,45,717	0/0:35,0:35:90.22:0,90,1396	0/0:33,0:33:78.27:0,78,1236	0/0:25,0:25:72.23:0,72,1121	0/1:12,1:13:2.67:3,0,534	0/0:20,0:20:54.92:0,55,776	0/0:22,0:22:66.11:0,66,977	0/0:28,0:28:84.29:0,84,1330	0/0:24,0:24:72.25:0,72,1143	0/0:19,0:19:51.17:0,51,812	0/0:21,0:21:57.19:0,57,909	0/0:20,0:20:60.20:0,60,949	0/0:19,0:19:54.18:0,54,856	0/1:19,1:20:44.30:44,0,290	0/0:23,0:23:8.32:0,8,143	0/0:9,0:9:2.92:0,3,17
chr10	22535393	.	A	AT	6492.78	PASS	AB=1.000;AC=25;AF=0.446;AN=56;BaseQRankSum=-1.800;DP=448;FS=32.379;HRun=0;HaplotypeScore=54.7007;InbreedingCoeff=0.9117;MQ=54.04;MQ0=0;MQRankSum=-2.054;QD=36.48;ReadPosRankSum=2.873;VQSLOD=2.8423;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:48.09:0,48,615	0/0:5,0:5:15.05:0,15,210	0/1:16,0:9:24.73:25,0,229	0/0:13,0:9:21.06:0,21,275	1/1:2,19:21:42.14:669,42,0	1/1:0,11:11:30.10:478,30,0	1/1:0,8:8:18.06:286,18,0	0/0:25,0:25:72.18:0,72,939	0/0:6,0:6:15.94:0,16,211	0/0:18,0:18:51.16:0,51,702	0/0:25,0:24:66.21:0,66,903	1/1:0,18:18:45.15:715,45,0	1/1:0,14:14:39.13:621,39,0	1/1:0,15:15:36.12:574,36,0	1/1:0,9:9:24.08:381,24,0	1/1:0,12:12:27.09:429,27,0	0/0:22,0:22:16.05:0,16,753	0/0:24,0:24:60.20:0,60,839	0/0:10,0:10:24.05:0,24,302	0/0:24,0:24:72.24:0,72,1007	0/0:19,0:19:51.16:0,51,697	1/1:0,16:16:45.15:716,45,0	1/1:2,14:15:44.90:625,45,0	1/1:0,3:3:9.03:143,9,0	1/1:2,17:19:54.10:830,54,0	0/0:24,0:24:69.18:0,69,927	0/0:26,0:26:75.25:0,75,1047	0/0:11,0:11:33.11:0,33,461
chr10	22535444	.	CA	C	547.16	PASS	AB=0.981;AC=5;AF=0.089;AN=56;BaseQRankSum=-3.180;DP=532;FS=9.282;HRun=12;HaplotypeScore=111.2576;InbreedingCoeff=0.2286;MQ=70.60;MQ0=0;MQRankSum=0.845;QD=6.36;ReadPosRankSum=0.549;VQSLOD=1.7588;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,18:21:47.77:371,48,0	0/0:5,0:5:12.02:0,12,121	0/0:25,0:16:11.09:0,11,166	0/0:24,0:14:15.79:0,16,124	0/0:17,0:26:55.25:0,55,266	0/0:10,0:10:20.59:0,21,149	0/0:11,1:12:6.50:0,6,181	0/1:30,0:30:33.29:187,0,33	0/0:15,0:15:39.04:0,39,386	0/1:18,0:18:72.24:78,0,72	0/0:16,0:15:1.86:0,2,66	0/0:19,1:19:14.11:0,14,199	0/1:16,1:17:33.40:33,0,156	0/0:18,0:17:28.85:0,29,203	0/0:14,0:15:29.76:0,30,138	0/0:10,0:15:16.64:0,17,114	0/0:21,1:22:33.87:0,34,518	0/0:24,0:25:59.78:0,60,570	0/0:19,1:20:11.99:0,12,334	0/0:16,1:17:15.93:0,16,341	0/0:17,2:19:1.61:0,2,375	0/0:21,0:21:50.15:0,50,383	0/0:18,0:18:41.10:0,41,299	0/0:6,0:6:14.81:0,15,116	0/0:24,0:25:64.25:0,64,434	0/0:25,0:25:27.38:0,27,442	0/0:26,0:28:68.29:0,68,641	0/0:14,1:16:24.68:0,25,411
chr10	22535452	.	A	AAAAG	7263.80	PASS	AB=0.752;AC=21;AF=0.375;AN=56;BaseQRankSum=-0.914;DP=561;FS=41.192;HRun=0;HaplotypeScore=123.1293;InbreedingCoeff=0.1154;MQ=69.58;MQ0=0;MQRankSum=-4.313;QD=23.36;ReadPosRankSum=-1.016;VQSLOD=2.5637;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:22:99:102,0,311	0/0:5,0:5:15.03:0,15,188	0/0:27,0:13:10.94:0,11,181	0/0:31,0:17:2.85:0,3,172	0/1:16,0:24:49.94:439,0,50	0/1:6,0:10:39.84:229,0,40	0/1:6,0:11:45.45:249,0,45	1/1:7,23:32:77.94:1160,78,0	0/0:14,0:14:39.09:0,39,569	1/1:0,21:21:57.05:993,57,0	1/1:2,14:17:38.70:646,39,0	0/1:14,0:21:40.90:509,0,41	0/1:13,1:16:25.03:299,0,25	0/1:15,0:18:83.88:290,0,84	1/1:16,0:20:39.58:492,40,0	1/1:15,0:18:5.57:226,6,0	0/0:23,0:23:46.20:0,46,827	0/0:24,0:24:62.72:0,63,893	0/0:20,0:20:53.71:0,54,593	0/0:19,0:19:45.10:0,45,550	0/0:19,0:19:54.13:0,54,739	0/1:14,0:21:99:382,0,187	0/1:10,0:17:48.22:455,0,48	0/1:3,0:11:67.56:90,0,68	0/1:15,0:28:99:701,0,112	0/0:23,0:23:36.43:0,36,746	0/0:28,0:28:68.47:0,68,905	0/0:17,0:17:50.99:0,51,690
chr10	22536888	.	TAA	T	7138.30	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=6.813;DP=578;FS=2.327;HRun=11;HaplotypeScore=74.5802;InbreedingCoeff=0.9722;MQ=71.71;MQ0=2;MQRankSum=-0.230;QD=26.64;ReadPosRankSum=3.555;VQSLOD=5.2354;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:30:77.73:0,78,1121	0/0:9,0:9:24.08:0,24,369	0/0:10,0:9:12.04:0,12,174	0/0:7,0:7:12:0,12,124	1/1:3,27:30:78.14:817,78,0	1/1:3,17:19:45.11:479,45,0	1/1:1,17:18:45.11:479,45,0	0/0:23,0:23:66.21:0,66,971	0/0:20,0:20:48.15:0,48,719	0/0:29,0:29:84.26:0,84,1224	0/0:20,0:20:48.15:0,48,716	1/1:2,20:22:57.13:607,57,0	1/1:1,27:28:78.19:830,78,0	1/1:2,16:18:45.09:479,45,0	1/1:2,27:30:74.90:778,75,0	1/1:3,23:25:63.14:670,63,0	0/0:30,0:31:89.78:0,90,1318	0/0:4,0:4:6.01:0,6,72	0/0:23,0:24:66.22:0,66,989	0/0:16,0:16:36.12:0,36,552	0/0:13,0:13:36.12:0,36,551	1/1:0,12:12:33.04:339,33,0	1/1:3,17:20:42.10:447,42,0	1/1:0,20:20:54.14:575,54,0	1/1:2,22:24:60.14:639,60,0	0/0:7,0:27:75.14:0,75,799	0/0:7,0:39:87.13:0,87,843	0/0:2,0:8:12.02:0,12,132
chr10	22538027	.	GA	G	6266.44	PASS	AB=0.944;AC=38;AF=0.679;AN=56;BaseQRankSum=8.425;DP=401;FS=1.444;HRun=9;HaplotypeScore=45.6769;InbreedingCoeff=0.8140;MQ=73.62;MQ0=0;MQRankSum=2.556;QD=20.75;ReadPosRankSum=0.703;VQSLOD=5.0729;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:7:18.05:0,18,208	0/1:7,1:8:3.40:3,0,218	0/0:5,0:5:6.02:0,6,69	0/1:12,0:12:24.63:25,0,83	1/1:3,25:28:72.03:659,72,0	1/1:2,16:18:48.02:439,48,0	1/1:1,6:7:15.01:137,15,0	1/1:1,16:17:48.03:439,48,0	0/0:14,0:14:39.12:0,39,450	1/1:0,17:17:51.03:467,51,0	1/1:0,31:31:90.05:824,90,0	1/1:0,14:14:39.02:357,39,0	1/1:5,13:18:39.01:357,39,0	1/1:0,17:17:51.03:467,51,0	1/1:1,0:14:24.44:72,24,0	1/1:1,0:23:42.78:126,43,0	0/0:15,0:15:45.11:0,45,507	0/0:11,0:12:26.77:0,27,278	0/0:18,0:18:42.12:0,42,485	0/0:25,0:25:72.18:0,72,817	0/0:3,0:3:9.01:0,9,95	1/1:0,5:5:15.01:137,15,0	1/1:0,8:8:24.01:220,24,0	1/1:0,2:2:6:55,6,0	1/1:2,16:18:39.01:357,39,0	1/1:0,15:15:45.02:412,45,0	1/1:2,19:21:57.03:522,57,0	1/1:2,7:9:21.01:192,21,0
chr10	22538187	.	T	TA	8196.30	PASS	AB=1.000;AC=39;AF=0.696;AN=56;BaseQRankSum=-10.432;DP=438;FS=35.900;HRun=8;HaplotypeScore=45.6981;InbreedingCoeff=0.8975;MQ=76.22;MQ0=0;MQRankSum=0.546;QD=24.47;ReadPosRankSum=0.256;VQSLOD=2.6594;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,13:13:36.11:415,36,0	0/0:2,0:2:6:0,6,55	0/1:19,0:15:5.83:6,0,136	0/0:13,0:8:8.02:0,8,60	1/1:5,18:23:16.90:515,17,0	1/1:1,14:15:36.11:414,36,0	1/1:1,5:6:18.05:207,18,0	1/1:1,18:19:54.12:593,54,0	0/0:10,0:10:24:0,24,216	1/1:4,16:20:24.47:472,24,0	1/1:2,24:26:64.28:681,64,0	1/1:4,8:12:20.98:225,21,0	1/1:3,12:15:30.98:349,31,0	1/1:4,6:10:18.05:208,18,0	1/1:3,13:16:33.10:381,33,0	1/1:2,19:21:45.13:519,45,0	0/0:21,0:21:57.03:0,57,521	0/0:9,0:9:23.95:0,24,210	0/0:21,0:21:54.02:0,54,491	0/0:18,0:18:45.02:0,45,412	0/0:9,0:9:27.01:0,27,247	1/1:0,14:14:33.10:381,33,0	1/1:0,13:13:33.10:381,33,0	1/1:0,10:10:24.07:277,24,0	1/1:2,17:19:45.13:519,45,0	1/1:6,20:26:60.17:683,60,0	1/1:2,21:23:57.17:658,57,0	1/1:5,10:15:27.08:312,27,0
chr10	22538847	.	CAGAGAG	C	787.81	PASS	AB=1.000;AC=23;AF=0.548;AN=42;BaseQRankSum=4.689;DP=391;FS=13.658;HRun=0;HaplotypeScore=84.0012;InbreedingCoeff=0.5017;MQ=70.38;MQ0=10;MQRankSum=-4.371;QD=4.43;ReadPosRankSum=1.079;VQSLOD=0.0673;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:9.01:0,9,159	0/0:5,0:6:8.14:0,8,149	./.	./.	1/1:20,0:21:3.48:42,3,0	./.	0/0:14,0:14:0.47:0,0,1	0/0:20,0:20:1.55:0,2,4	./.	1/1:8,3:11:3:60,3,0	0/0:19,0:18:6.02:0,6,86	./.	./.	1/1:7,0:11:12.04:167,12,0	1/1:12,5:19:15.05:263,15,0	1/1:11,3:14:3.01:60,3,0	0/0:9,0:14:9.03:0,9,226	0/0:14,0:13:12.51:0,13,327	0/0:14,0:14:3:0,3,28	0/0:15,0:14:5.99:0,6,50	0/1:16,0:15:0.15:0,0,41	1/1:12,0:12:3.01:42,3,0	1/1:11,0:13:3.01:42,3,0	1/1:9,0:12:3.01:42,3,0	1/1:8,0:10:3.01:42,3,0	1/1:8,0:11:2.10:40,2,0	1/1:21,0:26:9.03:126,9,0	./.
chr10	22540997	.	GTAGATATAAAGGA	G	17977.23	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=16.328;DP=617;FS=5.897;HRun=0;HaplotypeScore=255.9915;InbreedingCoeff=0.9735;MQ=76.15;MQ0=0;MQRankSum=-16.303;QD=80.98;ReadPosRankSum=3.475;VQSLOD=4.1764;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:54.19:0,54,3410	0/0:13,0:13:39.12:0,39,2418	0/0:16,0:16:45.15:0,45,2366	0/0:15,0:16:42.14:0,42,2053	1/1:1,33:35:92.99:3003,93,0	1/1:3,27:30:54.19:2095,54,0	1/1:1,17:18:33.03:1162,33,0	0/0:34,0:34:96.32:0,96,5947	0/0:17,0:17:51.17:0,51,2832	0/0:31,0:31:93.31:0,93,5346	0/0:30,0:30:87.30:0,87,5057	1/1:1,11:12:30.10:1224,30,0	1/1:1,22:23:51.18:2046,51,0	1/1:1,19:20:42.14:1714,42,0	0/0:22,0:22:66.23:0,66,4200	0/0:22,0:22:63.22:0,63,4016	0/0:16,0:16:48.16:0,48,3060	0/0:16,0:16:48.16:0,48,3023	0/0:19,0:19:57.20:0,57,3282	0/0:31,0:31:90.28:0,90,5179	0/0:21,0:21:63.22:0,63,3754	1/1:3,17:20:42.09:1576,42,0	1/1:6,22:28:57.13:2154,57,0	1/1:1,8:9:2.95:122,3,0	1/1:1,26:27:72.25:2881,72,0	0/0:29,0:29:87.30:0,87,5343	0/0:23,0:23:69.24:0,69,4396	0/0:21,0:21:59.99:0,60,3644
chr10	22541550	.	AG	A	905.15	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.517;DP=674;FS=0.000;HRun=1;HaplotypeScore=66.8986;InbreedingCoeff=0.9449;MQ=78.91;MQ0=0;MQRankSum=-2.136;QD=31.21;ReadPosRankSum=0.961;VQSLOD=3.2480;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,29:29:72.24:1000,72,0	0/0:16,0:16:48.14:0,48,739	0/0:19,0:19:57.19:0,57,891	0/0:11,0:11:33.11:0,33,497	0/0:31,0:31:93.30:0,93,1461	0/0:27,0:27:81.28:0,81,1293	0/0:12,0:12:36.11:0,36,550	0/0:31,0:31:93.31:0,93,1464	0/0:21,0:21:63.20:0,63,979	0/0:34,0:34:99:0,99,1555	0/0:26,0:26:78.25:0,78,1219	0/0:32,0:32:96.31:0,96,1496	0/0:23,0:23:69.21:0,69,1073	0/0:29,0:29:87.30:0,87,1387	0/0:23,0:23:69.22:0,69,1077	0/0:22,0:22:66.21:0,66,1024	0/0:19,0:19:57.18:0,57,855	0/0:3,0:3:9.03:0,9,143	0/0:18,0:18:54.18:0,54,864	0/0:37,0:37:99:0,111,1729	0/0:30,0:30:90.29:0,90,1393	0/0:30,0:30:90.27:0,90,1390	0/0:23,0:23:69.24:0,69,1101	0/0:15,0:15:42.14:0,42,653	0/0:31,0:31:93.32:0,93,1481	0/0:22,0:22:66.23:0,66,1055	0/0:37,0:37:99:0,111,1747	0/0:23,0:23:69.24:0,69,1103
chr10	22542281	.	CTA	C	1647.23	PASS	AB=0.500;AC=11;AF=0.196;AN=56;BaseQRankSum=1.842;DP=520;FS=0.585;HRun=0;HaplotypeScore=73.0775;InbreedingCoeff=0.8826;MQ=74.56;MQ0=19;MQRankSum=0.384;QD=17.71;ReadPosRankSum=-2.064;VQSLOD=3.0895;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:57.24:0,57,797	0/0:4,0:4:8.96:0,9,112	0/0:44,0:26:74.98:0,75,1276	0/0:56,0:30:60.86:0,61,1253	0/0:10,0:10:28.34:0,28,423	0/0:17,0:18:37.37:0,37,606	0/0:15,0:12:21.07:0,21,352	1/1:1,18:18:48.16:665,48,0	0/0:11,0:11:29.71:0,30,426	1/1:18,2:20:53.37:657,53,0	0/1:0,11:11:0:0,0,0	0/0:11,0:11:26.96:0,27,427	0/0:13,0:14:30.57:0,31,475	0/0:20,0:19:42.14:0,42,696	0/0:18,0:17:42.14:0,42,723	0/0:12,0:12:29.99:0,30,470	0/0:20,0:20:54.08:0,54,812	0/0:16,0:15:41.17:0,41,585	0/0:16,0:16:48.08:0,48,789	0/0:18,0:18:42.13:0,42,682	0/0:30,0:30:72.15:0,72,1096	0/0:19,0:18:39.98:0,40,650	0/0:9,0:9:24.08:0,24,374	0/0:22,0:20:35.75:0,36,586	0/0:15,0:15:26.80:0,27,449	1/1:11,3:15:23.45:373,23,0	1/1:1,13:14:3.01:36,3,0	1/1:0,14:14:6.02:76,6,0
chr10	22542726	.	TTC	T	3818.99	PASS	AB=0.740;AC=38;AF=0.679;AN=56;BaseQRankSum=12.173;DP=599;FS=0.000;HRun=0;HaplotypeScore=198.8775;InbreedingCoeff=0.7435;MQ=67.08;MQ0=4;MQRankSum=-5.201;QD=9.84;ReadPosRankSum=2.480;VQSLOD=3.4319;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:12,7:19:0.01:0,0,0	1/1:2,6:14:20.90:207,21,0	0/0:28,0:21:19.03:0,19,209	0/0:17,0:15:2.39:0,2,117	1/1:16,11:39:32.30:357,32,0	1/1:6,12:23:39.90:434,40,0	1/1:7,9:19:14.80:114,15,0	0/0:36,0:35:71.61:0,72,975	1/1:13,7:29:1.94:224,2,0	0/0:27,0:27:47.94:0,48,729	0/0:21,0:21:45.08:0,45,619	1/1:5,14:22:27.01:317,27,0	1/1:6,10:20:38.92:410,39,0	1/1:5,9:24:33.67:341,34,0	1/1:1,1:17:3.01:33,3,0	1/1:5,12:22:20.79:174,21,0	1/1:1,0:12:8.71:49,9,0	0/1:6,3:9:15.19:50,0,15	1/1:5,1:14:26.83:280,27,0	1/1:9,8:28:17.86:188,18,0	1/1:3,5:9:2.92:17,3,0	1/1:5,12:25:15.92:179,16,0	1/1:7,4:14:6:61,6,0	1/1:0,11:12:21.07:267,21,0	1/1:6,6:13:11.86:116,12,0	0/0:28,0:28:70.08:0,70,1003	0/0:35,0:34:59.68:0,60,1174	0/0:19,0:19:25.36:0,25,431
chr10	22542754	.	GTGCA	G	1815.96	PASS	AB=0.994;AC=28;AF=0.500;AN=56;BaseQRankSum=3.934;DP=633;FS=53.917;HRun=0;HaplotypeScore=247.9667;InbreedingCoeff=-0.3405;MQ=42.78;MQ0=11;MQRankSum=-3.073;QD=3.40;ReadPosRankSum=-0.536;VQSLOD=0.7985;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:22:2.22:6,2,0	0/1:20,0:20:10.30:152,0,10	0/1:10,0:8:43.10:43,0,110	0/0:5,0:4:9:0,9,135	0/1:30,1:31:90.18:90,0,109	0/1:34,0:33:13.61:14,0,117	1/1:21,0:19:1.08:60,1,0	0/0:34,0:30:49:0,49,974	0/1:23,1:24:30.66:177,0,31	0/1:25,0:25:18.73:19,0,640	0/0:25,0:25:29.89:0,30,416	0/1:19,0:19:68.24:68,0,83	0/1:24,0:24:98.53:184,0,99	0/1:28,0:27:82.58:122,0,83	1/1:21,0:20:15.81:167,16,0	0/1:23,1:24:19.38:37,0,19	0/0:15,0:13:12.08:0,12,95	0/1:12,0:12:42.22:133,0,42	0/0:20,0:20:17.84:0,18,339	1/1:32,2:33:30.72:225,31,0	1/1:16,0:15:3.01:46,3,0	0/1:30,0:30:40.40:48,0,40	0/1:16,0:16:4.15:40,0,4	0/1:23,0:22:9.71:10,0,98	0/1:15,0:15:14.57:80,0,15	0/1:31,0:29:99:107,0,738	0/1:37,0:36:99:110,0,702	0/1:17,0:16:43.07:43,0,149
chr10	22542756	.	GCA	G	2273.95	PASS	AB=0.824;AC=27;AF=0.482;AN=56;BaseQRankSum=2.678;DP=612;FS=33.258;HRun=0;HaplotypeScore=224.1998;InbreedingCoeff=-0.3496;MQ=41.92;MQ0=11;MQRankSum=-3.101;QD=4.49;ReadPosRankSum=-0.127;VQSLOD=1.6258;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:18,5:23:5.87:51,6,0	0/1:14,4:18:12.29:173,0,12	0/1:6,2:6:42.77:43,0,111	0/0:5,0:4:9:0,9,135	0/1:18,10:28:99:105,0,126	0/1:28,7:34:20.74:21,0,159	0/1:17,1:17:1.84:61,0,2	0/0:34,0:30:49.79:0,50,976	0/1:13,10:23:30.74:219,0,31	0/0:23,0:23:0.91:0,1,668	0/0:26,0:26:29.89:0,30,416	0/1:16,3:19:90.58:91,0,108	0/1:19,4:24:99:219,0,125	0/1:18,8:25:99:143,0,104	1/1:14,6:19:20.75:245,21,0	0/1:19,5:24:15.16:85,0,15	0/1:12,2:12:2.81:3,0,82	0/1:12,1:13:41.81:201,0,42	0/1:17,1:18:3.20:3,0,319	1/1:18,13:30:31.28:342,31,0	1/1:16,0:15:3.01:46,3,0	0/1:20,8:28:52.37:118,0,52	0/1:6,10:16:8.47:54,0,8	0/1:18,5:22:23.74:24,0,135	0/1:9,6:15:23.54:125,0,24	0/1:28,3:29:46.78:47,0,787	0/1:35,0:35:18.02:18,0,755	0/0:16,1:16:11.45:0,11,286
chr10	22542757	.	CATGT	C	680.84	PASS	AB=0.990;AC=19;AF=0.339;AN=56;BaseQRankSum=2.800;DP=613;FS=20.101;HRun=0;HaplotypeScore=242.7447;InbreedingCoeff=-0.4155;MQ=41.85;MQ0=10;MQRankSum=-0.544;QD=1.80;ReadPosRankSum=1.451;VQSLOD=1.2483;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:6.38:0,6,39	0/1:18,0:18:38.84:48,0,39	0/1:7,0:6:13.03:13,0,69	0/0:5,0:4:2.18:0,2,53	0/1:28,0:28:22.72:23,0,140	0/0:35,0:34:12.81:0,13,170	0/1:19,0:17:2.43:2,0,16	0/0:35,0:31:72.40:0,72,637	0/1:23,0:23:23.53:71,0,24	0/1:23,0:23:11.03:11,0,360	0/0:26,0:26:24.66:0,25,200	0/1:19,0:19:13.41:13,0,116	0/1:24,0:24:75.04:75,0,140	0/1:25,0:24:36.41:36,0,127	0/1:20,0:19:35.99:46,0,36	0/0:24,0:24:3.62:0,4,59	0/0:14,0:12:15.09:0,15,87	0/1:13,0:13:30.72:31,0,71	0/0:20,0:20:38.28:0,38,270	0/1:31,0:30:12.28:12,0,66	1/1:16,0:15:2.97:21,3,0	0/0:28,0:28:7.37:0,7,121	0/1:16,0:16:19.92:20,0,31	0/0:23,0:22:10.37:0,10,148	0/1:15,0:15:15.57:16,0,78	0/1:31,0:29:99:112,0,381	0/1:27,7:34:99:137,0,327	0/1:17,0:16:75.90:147,0,76
chr10	22542758	.	ATGTGTG	A	2258.75	PASS	AB=0.924;AC=34;AF=0.680;AN=50;BaseQRankSum=0.169;DP=627;FS=3.936;HRun=0;HaplotypeScore=256.3752;InbreedingCoeff=-0.0263;MQ=41.91;MQ0=10;MQRankSum=-0.344;QD=4.25;ReadPosRankSum=1.048;VQSLOD=2.2801;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:26:5.23:5,0,97	0/1:17,0:18:17.94:18,0,48	./.	./.	1/1:28,0:28:17.86:215,18,0	1/1:25,9:34:6.27:114,6,0	1/1:19,0:17:5.68:88,6,0	1/1:35,0:31:3:58,3,0	0/1:23,0:23:57.16:57,0,68	0/1:18,5:23:55.09:346,0,55	./.	1/1:19,2:21:10.68:107,11,0	1/1:25,0:26:20.45:367,20,0	1/1:24,0:23:13.77:181,14,0	0/1:21,0:20:99:150,0,122	0/1:24,0:24:50.65:56,0,51	0/0:15,0:13:6.89:0,7,58	0/1:13,0:13:2.84:3,0,127	0/0:26,0:26:13.78:0,14,131	0/1:32,0:32:99:122,0,151	0/0:16,0:15:1.25:0,1,3	1/1:26,1:27:17.59:152,18,0	1/1:15,0:15:1.46:14,1,0	1/1:23,1:23:6.02:96,6,0	1/1:15,0:15:14.85:142,15,0	0/1:27,0:29:40.21:40,0,45	1/1:29,0:34:6.53:40,7,0	0/1:8,0:16:11.71:38,0,12
chr10	22542764	.	G	GCA	758.60	PASS	AB=0.934;AC=18;AF=0.321;AN=56;BaseQRankSum=0.229;DP=626;FS=0.000;HRun=0;HaplotypeScore=237.7867;InbreedingCoeff=-0.4209;MQ=40.65;MQ0=11;MQRankSum=2.907;QD=1.81;ReadPosRankSum=-1.566;VQSLOD=2.2937;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:27:8.43:21,0,8	0/1:15,0:15:4.98:5,0,80	0/1:10,0:7:3.03:3,0,50	0/0:9,0:4:12.04:0,12,187	0/1:23,6:29:46.19:46,0,285	0/1:31,4:34:19.73:20,0,229	0/1:21,0:19:69.36:74,0,69	0/1:34,4:36:77.47:77,0,1024	0/0:22,0:22:16.33:0,16,167	0/0:21,0:21:17.66:0,18,635	0/0:23,0:23:21.07:0,21,314	0/1:14,2:17:11.84:12,0,232	0/1:26,0:26:99:152,0,364	0/1:19,4:22:44.17:44,0,238	0/1:20,0:20:20.70:21,0,33	0/1:27,0:27:44.05:44,0,46	0/0:15,0:13:12.19:0,12,142	0/1:12,0:12:13.86:14,0,190	0/0:24,0:24:53.50:0,54,539	0/1:34,0:33:3.88:4,0,147	0/0:16,0:15:1.24:0,1,3	0/1:24,4:28:99:101,0,112	0/1:13,1:14:32.36:64,0,32	0/1:24,1:24:96.61:97,0,189	0/1:10,5:15:29.97:112,0,30	0/0:31,0:29:87.10:0,87,1108	0/0:30,0:30:59.14:0,59,708	0/0:17,0:16:34.97:0,35,345
chr10	22542766	.	G	GCA	1029.42	PASS	AB=0.922;AC=12;AF=0.214;AN=56;BaseQRankSum=1.644;DP=626;FS=2.860;HRun=0;HaplotypeScore=236.5514;InbreedingCoeff=0.0772;MQ=40.73;MQ0=14;MQRankSum=1.611;QD=5.20;ReadPosRankSum=0.702;VQSLOD=3.1450;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:27,1:28:7.16:144,7,0	0/1:13,2:15:55.33:76,0,55	0/0:8,0:5:11.77:0,12,127	0/0:10,0:4:12.04:0,12,192	0/0:28,1:29:38.89:0,39,457	0/0:35,0:34:26.98:0,27,324	0/0:20,0:18:16.98:0,17,141	0/0:41,0:36:82.94:0,83,1178	0/0:21,0:21:3.93:0,4,175	0/0:21,0:21:59.97:0,60,742	0/0:23,0:23:21.07:0,21,313	0/0:17,0:17:25.49:0,25,353	0/0:26,0:26:18.85:0,19,471	0/0:25,0:24:32.99:0,33,390	0/1:17,3:20:13.81:252,0,14	0/1:23,4:27:10.83:297,0,11	0/1:16,1:15:15.30:15,0,121	0/1:13,0:13:46.47:46,0,147	0/0:24,0:24:51.47:0,51,605	0/1:25,8:32:56.18:304,0,56	1/1:16,0:15:2.68:11,3,0	0/0:28,0:28:27.85:0,28,302	0/1:14,0:14:3.73:4,0,69	0/0:26,0:25:17.34:0,17,290	0/1:15,0:15:27.18:27,0,183	0/0:31,0:28:84.17:0,84,1100	0/0:27,0:27:56.09:0,56,632	0/0:16,0:15:32.97:0,33,342
chr10	22543907	.	AT	A	4461.30	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=12.286;DP=450;FS=17.306;HRun=8;HaplotypeScore=45.0225;InbreedingCoeff=0.9907;MQ=77.41;MQ0=0;MQRankSum=-0.874;QD=26.56;ReadPosRankSum=4.619;VQSLOD=3.4138;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:8:12.04:0,12,145	0/0:6,0:6:18.06:0,18,217	0/0:15,0:15:36.03:0,36,389	0/0:9,0:9:23.79:0,24,242	1/1:0,24:24:69.11:666,69,0	1/1:0,13:13:27.04:261,27,0	1/1:0,8:8:24.04:232,24,0	0/0:26,0:26:66.20:0,66,797	0/0:10,0:10:27.08:0,27,326	0/0:22,0:22:60.18:0,60,716	0/0:23,0:24:66.03:0,66,757	1/1:1,12:13:33.05:319,33,0	1/1:2,18:20:50.84:492,51,0	1/1:1,14:15:39.06:377,39,0	0/0:19,0:19:57.16:0,57,676	0/0:10,0:10:30.08:0,30,350	0/0:16,0:16:45.14:0,45,542	0/0:16,0:16:41.98:0,42,461	0/0:19,0:19:48.15:0,48,580	0/0:20,0:20:59.84:0,60,680	0/0:16,0:16:45.14:0,45,544	1/1:1,20:21:60.10:579,60,0	1/1:0,18:18:54.09:521,54,0	1/1:0,11:11:30.05:290,30,0	1/1:0,25:25:75.12:724,75,0	0/0:17,0:17:51.14:0,51,603	0/0:24,0:24:60.17:0,60,713	0/0:5,0:5:15.05:0,15,181
chr10	22545550	.	G	GGA	342.52	PASS	AB=0.947;AC=19;AF=0.559;AN=34;BaseQRankSum=-1.544;DP=527;FS=33.103;HRun=0;HaplotypeScore=82.2524;InbreedingCoeff=0.3541;MQ=71.89;MQ0=16;MQRankSum=-0.553;QD=1.65;ReadPosRankSum=1.078;VQSLOD=-0.1451;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:2.87:0,3,23	./.	./.	./.	./.	./.	0/0:20,0:23:2.77:0,3,14	./.	1/1:13,0:13:6:63,6,0	0/0:18,0:18:2.84:0,3,31	./.	1/1:18,0:18:2.77:41,3,0	0/0:22,0:24:5.68:0,6,28	0/1:24,0:24:0:0,0,0	1/1:10,0:10:5.99:79,6,0	0/1:30,7:37:25.71:38,0,26	1/1:20,0:20:10.69:62,11,0	./.	1/1:18,0:17:3:28,3,0	1/1:20,0:20:9:91,9,0	1/1:17,0:17:5.98:47,6,0	./.	./.	0/0:17,0:16:0.47:0,0,1	./.	1/1:21,0:21:1.25:3,1,0	0/0:10,0:10:3.01:0,3,31	0/1:9,0:9:0:0,0,0
chr10	22545711	.	C	CT	1713.77	PASS	AB=0.871;AC=7;AF=0.125;AN=56;BaseQRankSum=-11.503;DP=656;FS=0.000;HRun=8;HaplotypeScore=63.5432;InbreedingCoeff=0.7706;MQ=67.85;MQ0=2;MQRankSum=1.567;QD=17.67;ReadPosRankSum=-1.573;VQSLOD=3.1161;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:48.01:0,48,439	0/0:10,0:10:24.01:0,24,219	0/0:25,0:21:46.09:0,46,370	0/0:15,0:12:0.95:0,1,141	0/0:29,0:29:62.33:0,62,593	0/0:28,0:29:74.03:0,74,658	0/0:24,0:24:59.99:0,60,539	1/1:5,19:24:51.13:574,51,0	0/0:21,0:21:54.03:0,54,494	1/1:3,22:24:63.19:726,63,0	1/1:3,18:20:23.69:527,24,0	0/0:26,0:26:69.02:0,69,627	0/0:33,0:33:84.03:0,84,769	0/0:29,2:31:56.53:0,57,680	0/0:19,0:19:45.02:0,45,412	0/0:31,0:31:78.04:0,78,713	0/0:20,0:20:51.02:0,51,467	0/0:6,0:6:15.01:0,15,137	0/0:24,0:24:51:0,51,463	0/0:29,0:29:75.03:0,75,686	0/0:15,0:15:42.02:0,42,384	0/0:20,0:20:51.03:0,51,466	0/0:28,0:28:72.04:0,72,659	0/0:29,0:29:81.02:0,81,736	0/0:29,0:29:72.03:0,72,659	0/1:23,4:27:34.81:35,0,475	0/0:35,0:35:93.02:0,93,846	0/0:9,0:9:27.01:0,27,247
chr10	22546347	.	AACTGCC	A	18621.40	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=15.879;DP=566;FS=6.648;HRun=0;HaplotypeScore=132.7369;InbreedingCoeff=0.9842;MQ=81.00;MQ0=0;MQRankSum=-17.302;QD=62.07;ReadPosRankSum=1.466;VQSLOD=5.2649;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,9:10:15.05:368,15,0	1/1:0,5:5:15.05:368,15,0	0/0:18,0:18:39.79:0,40,1654	0/0:21,0:21:63.15:0,63,2030	0/0:27,0:27:78.22:0,78,2701	0/0:33,0:33:93.30:0,93,3195	0/0:17,0:17:51.18:0,51,1735	1/1:2,22:24:66.03:1211,66,0	1/1:0,19:19:54.19:1326,54,0	1/1:0,25:25:75.22:1741,75,0	1/1:1,36:37:99:2399,102,0	0/0:15,0:15:42.14:0,42,1511	0/0:26,0:26:78.25:0,78,2721	0/0:21,0:21:60.19:0,60,2027	1/1:0,25:25:66.23:1588,66,0	1/1:0,19:19:51.18:1234,51,0	1/1:0,5:5:15.05:335,15,0	1/1:1,7:8:21.07:516,21,0	1/1:1,24:25:66.08:1348,66,0	1/1:1,23:24:66.11:1479,66,0	1/1:1,7:8:9.03:221,9,0	0/0:19,0:19:57.20:0,57,1992	0/0:24,0:24:69.22:0,69,2396	0/0:14,0:14:42.10:0,42,1321	0/0:31,0:31:90.31:0,90,3173	1/1:0,23:23:66.23:1591,66,0	1/1:0,34:34:99:2379,99,0	1/1:0,9:9:21.07:516,21,0
chr10	22547414	.	C	CT	8542.52	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=-7.902;DP=564;FS=1.973;HRun=9;HaplotypeScore=67.6983;InbreedingCoeff=0.9578;MQ=72.22;MQ0=0;MQRankSum=0.894;QD=26.86;ReadPosRankSum=-2.885;VQSLOD=4.1174;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:6,21:27:14.08:609,14,0	1/1:0,7:7:21.06:231,21,0	0/0:28,0:17:3.08:0,3,156	0/0:18,0:12:11.95:0,12,94	0/0:30,0:30:77.93:0,78,669	0/0:27,0:27:59.97:0,60,521	0/0:11,0:11:29.99:0,30,260	1/1:6,13:19:15.95:388,16,0	1/1:3,11:14:39.11:431,39,0	1/1:8,15:23:54.14:592,54,0	1/1:10,26:36:90.24:994,90,0	0/0:19,0:19:53.98:0,54,469	0/0:23,0:23:62.98:0,63,547	0/0:21,0:21:56.99:0,57,494	1/1:10,17:27:69.17:752,69,0	1/1:2,12:14:36.10:398,36,0	1/1:4,11:15:10.04:339,10,0	1/1:2,8:9:27.07:299,27,0	1/1:5,14:19:25.97:477,26,0	1/1:7,21:28:66.18:730,66,0	1/1:1,6:7:18.05:199,18,0	0/0:11,0:11:29.97:0,30,256	0/0:26,0:26:68.97:0,69,599	0/0:12,0:12:29.99:0,30,260	0/0:19,0:19:41.96:0,42,360	1/1:5,27:33:87.24:962,87,0	1/1:7,22:29:61.16:877,61,0	1/1:1,8:9:24.06:265,24,0
chr10	22547478	.	C	CA	11645.44	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-1.097;DP=552;FS=19.367;HRun=8;HaplotypeScore=78.8961;InbreedingCoeff=0.8783;MQ=67.24;MQ0=0;MQRankSum=-5.643;QD=21.73;ReadPosRankSum=3.446;VQSLOD=3.6049;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,12:17:39.06:425,39,0	1/1:2,3:5:9.03:104,9,0	0/0:11,0:10:5.28:0,5,161	0/0:5,0:5:11.35:0,11,82	1/1:5,0:41:93.95:482,94,0	1/1:2,0:15:36.93:188,37,0	1/1:2,1:15:34.26:193,34,0	1/1:2,25:27:75.19:845,75,0	1/1:0,15:15:36.07:402,36,0	1/1:5,25:31:81.22:913,81,0	1/1:3,22:25:63.15:712,63,0	1/1:2,0:16:33.99:171,34,0	1/1:5,0:31:68.18:347,68,0	1/1:1,1:20:36.93:188,37,0	1/1:3,25:28:75.22:865,75,0	1/1:1,6:11:29.42:265,29,0	1/1:0,9:9:24.07:277,24,0	1/1:1,6:7:18.05:208,18,0	1/1:6,14:20:45.11:500,45,0	1/1:4,24:29:74.97:815,75,0	1/1:0,10:10:24.07:277,24,0	1/1:1,0:17:42.61:217,43,0	1/1:5,2:26:54.13:294,54,0	1/1:1,0:15:31.25:159,31,0	1/1:1,0:18:36.93:188,37,0	1/1:5,23:28:69.21:796,69,0	1/1:4,31:35:93.11:1053,93,0	1/1:1,23:24:66.20:762,66,0
chr10	22547907	.	GT	G	6630.88	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=12.008;DP=519;FS=17.311;HRun=9;HaplotypeScore=52.3957;InbreedingCoeff=0.9701;MQ=79.73;MQ0=0;MQRankSum=-2.918;QD=23.43;ReadPosRankSum=1.889;VQSLOD=3.8136;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,17:21:50.51:448,51,0	1/1:0,9:9:21.01:192,21,0	0/0:17,0:17:47.68:0,48,464	0/0:14,0:14:15.84:0,16,159	0/0:30,0:30:87.21:0,87,988	0/0:30,0:30:87.25:0,87,994	0/0:21,0:21:57.04:0,57,638	1/1:2,18:20:54.02:494,54,0	1/1:0,9:9:27.01:247,27,0	1/1:0,20:20:60.03:549,60,0	1/1:3,24:27:75.04:686,75,0	0/0:15,0:15:45.12:0,45,510	0/0:26,0:26:75.19:0,75,843	0/0:18,0:18:42.12:0,42,485	1/1:2,14:16:44.06:390,44,0	1/1:1,12:13:30.01:275,30,0	1/1:3,21:24:57.03:522,57,0	1/1:0,7:7:21.01:192,21,0	1/1:6,16:22:48.01:439,48,0	1/1:2,22:24:66.03:604,66,0	1/1:3,9:12:27.01:247,27,0	0/0:11,1:12:2.62:0,3,284	0/0:20,0:20:48.13:0,48,546	0/0:13,0:12:36.11:0,36,415	0/0:20,0:20:57.16:0,57,649	1/1:2,12:14:36.02:329,36,0	1/1:4,33:37:90.05:824,90,0	1/1:0,8:8:21.01:192,21,0
chr10	22549184	.	A	AAACC	10001.44	PASS	AB=0.992;AC=46;AF=0.821;AN=56;BaseQRankSum=-1.695;DP=632;FS=3.804;HRun=0;HaplotypeScore=123.5392;InbreedingCoeff=0.1726;MQ=64.18;MQ0=15;MQRankSum=-0.153;QD=16.95;ReadPosRankSum=-2.050;VQSLOD=4.3273;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:31,0:31:9.03:173,9,0	1/1:4,0:4:8.96:77,9,0	0/0:16,0:7:6.87:0,7,51	0/0:26,0:11:5.14:0,5,66	1/1:9,18:27:49.84:791,50,0	1/1:18,19:38:21.07:509,21,0	1/1:6,12:19:9.03:218,9,0	0/1:33,0:31:29.44:29,0,195	1/1:18,0:21:33.01:391,33,0	0/1:20,0:20:13.05:304,0,13	0/1:14,0:14:68.14:161,0,68	1/1:13,22:35:27.09:653,27,0	1/1:4,19:24:21.03:505,21,0	1/1:8,23:31:27.09:654,27,0	1/1:12,0:20:41.95:506,42,0	1/1:17,0:17:15.05:281,15,0	1/1:22,0:28:44.67:376,45,0	1/1:10,0:13:23.97:244,24,0	1/1:19,0:25:34.89:290,35,0	1/1:10,0:14:26.98:268,27,0	1/1:17,0:17:14.85:113,15,0	1/1:7,22:31:54.54:997,55,0	1/1:2,18:20:24.55:546,25,0	1/1:11,16:26:30.10:727,30,0	1/1:3,15:19:30.06:711,30,0	0/1:20,0:21:99:167,0,124	0/1:27,0:27:99:269,0,123	0/1:11,0:11:41.37:41,0,100
chr10	22549198	.	A	ACCAACCAA	10000.03	PASS	AB=1.000;AC=43;AF=0.768;AN=56;BaseQRankSum=2.096;DP=612;FS=11.802;HRun=0;HaplotypeScore=161.2055;InbreedingCoeff=0.2718;MQ=57.48;MQ0=15;MQRankSum=-0.757;QD=18.98;ReadPosRankSum=6.954;VQSLOD=2.9259;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:30:12.04:292,12,0	1/1:4,0:4:9.03:188,9,0	0/0:17,0:7:6.91:0,7,110	0/0:27,0:11:11.49:0,11,118	1/1:27,0:27:14.38:201,14,0	1/1:26,0:26:20.98:173,21,0	1/1:19,0:19:9.88:76,10,0	0/0:41,0:39:12.74:0,13,463	1/1:17,0:17:33.11:869,33,0	0/1:23,0:23:64.92:521,0,65	0/1:15,0:15:99:268,0,146	1/1:32,0:32:26.99:234,27,0	1/1:28,0:28:20.37:168,20,0	1/1:28,0:28:26.97:222,27,0	1/1:20,0:20:42.14:1185,42,0	1/1:8,6:15:15.05:542,15,0	1/1:26,0:26:45.08:835,45,0	1/1:12,0:12:25.87:526,26,0	1/1:27,0:24:38.89:489,39,0	1/1:11,0:11:27:492,27,0	1/1:14,0:14:18.05:339,18,0	0/1:31,0:31:2.82:245,0,3	1/1:22,0:22:23.65:192,24,0	0/1:23,0:22:4.78:226,0,5	1/1:19,0:19:29.94:231,30,0	0/1:20,0:20:99:461,0,219	0/1:27,0:27:99:842,0,213	0/1:11,0:11:99:183,0,172
chr10	22549207	.	C	CCAACCAAACAAA	7992.78	PASS	AB=0.961;AC=21;AF=0.375;AN=56;BaseQRankSum=3.123;DP=626;FS=3.142;HRun=0;HaplotypeScore=209.4740;InbreedingCoeff=-0.3700;MQ=54.77;MQ0=14;MQRankSum=-6.974;QD=19.78;ReadPosRankSum=3.985;VQSLOD=3.9875;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:1,23:40:10.85:478,11,0	0/1:4,0:4:35.98:68,0,36	0/0:15,0:7:15.88:0,16,204	0/0:30,0:14:29.14:0,29,453	0/1:25,0:25:99:164,0,333	0/0:23,0:23:1.58:0,2,104	0/0:20,0:20:3.88:0,4,180	0/1:42,0:40:99:678,0,227	0/1:15,0:15:69.96:310,0,70	1/1:22,0:23:11.30:1527,11,0	0/1:13,0:16:58.81:840,0,59	0/0:32,0:32:19.41:0,19,226	0/0:30,0:30:6.29:0,6,288	0/0:27,0:27:22.67:0,23,264	0/1:21,0:21:82.43:412,0,82	0/1:16,0:16:99:223,0,149	0/1:27,0:27:99:357,0,211	0/1:13,0:13:18.34:265,0,18	0/1:25,0:22:63.92:64,0,277	0/1:11,0:11:18.24:210,0,18	0/1:12,0:12:99:246,0,126	0/1:30,0:30:99:124,0,259	0/1:23,0:23:21.34:21,0,152	0/0:26,0:25:9.86:0,10,266	0/0:19,0:19:6.24:0,6,135	0/1:18,0:22:97.53:769,0,98	0/1:21,0:28:65.81:1066,0,66	0/1:9,0:11:96.66:174,0,97
chr10	22549211	.	A	AACCAAC	2563.34	PASS	AB=0.965;AC=18;AF=0.321;AN=56;BaseQRankSum=8.823;DP=608;FS=15.651;HRun=0;HaplotypeScore=171.2283;InbreedingCoeff=-0.2182;MQ=55.25;MQ0=12;MQRankSum=0.410;QD=8.49;ReadPosRankSum=12.128;VQSLOD=-0.0714;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:34,0:34:6.09:60,6,0	0/1:4,0:4:15.31:55,0,15	0/0:18,0:8:22.26:0,22,338	0/0:34,0:19:40.49:0,40,859	0/0:25,0:25:19.49:0,19,738	0/0:23,0:23:2.49:0,2,172	0/0:19,0:19:12.40:0,12,320	0/0:44,0:42:99:0,111,1852	1/1:12,4:16:0.60:429,1,0	0/1:24,0:24:48.35:48,0,567	0/1:14,0:14:27.57:28,0,423	0/1:29,0:29:5.51:6,0,336	0/0:27,0:27:14.82:0,15,444	0/0:23,0:23:3.38:0,3,318	0/1:17,4:21:1.16:578,0,1	0/1:10,3:14:6.45:426,0,6	0/1:27,1:28:99:262,0,114	0/1:12,1:13:8.15:261,0,8	0/1:22,0:21:87.82:88,0,261	0/1:11,0:11:21.99:192,0,22	0/1:11,0:11:48.84:49,0,138	0/0:30,0:30:23.91:0,24,800	0/0:20,0:20:4.03:0,4,341	0/0:24,0:23:1.79:0,2,362	0/0:19,0:19:0.10:0,0,177	0/1:21,0:21:80.76:81,0,671	0/1:29,0:29:99:123,0,807	0/1:11,0:11:30.80:31,0,213
chr10	22549981	.	TA	T	971.37	PASS	AB=0.850;AC=17;AF=0.304;AN=56;BaseQRankSum=6.963;DP=480;FS=2.064;HRun=14;HaplotypeScore=69.6645;InbreedingCoeff=0.4261;MQ=78.92;MQ0=3;MQRankSum=-0.405;QD=4.60;ReadPosRankSum=0.516;VQSLOD=1.7778;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,1:30:44.76:129,45,0	0/0:6,0:6:14.96:0,15,124	0/0:30,1:19:16.43:0,16,94	0/1:40,3:30:28.11:28,0,127	0/1:14,2:17:2.29:2,0,250	0/0:15,1:16:12.46:0,12,258	0/1:11,4:15:8.21:8,0,207	1/1:6,10:17:31.72:210,32,0	0/0:12,0:12:30.02:0,30,274	1/1:5,13:18:14.43:240,14,0	1/1:5,11:17:8.95:189,9,0	0/1:9,3:12:28.79:29,0,166	0/0:16,1:17:15.45:0,15,282	0/1:7,0:7:1.47:1,0,97	1/1:4,12:16:35.64:244,36,0	0/1:3,3:6:15.94:50,0,16	0/0:26,0:26:66.05:0,66,605	0/0:16,0:16:38.98:0,39,345	0/0:19,0:19:33:0,33,298	0/0:23,1:24:18.45:0,18,310	0/0:14,0:16:13.33:0,13,177	0/0:8,0:8:15.02:0,15,139	0/1:11,2:13:20.16:20,0,114	0/0:14,0:15:38.80:0,39,337	0/0:19,0:21:50.88:0,51,454	0/0:18,2:20:12.43:0,12,252	0/0:10,0:10:18:0,18,159	0/0:11,1:12:6.90:0,7,198
chr10	22550174	.	G	GGAGA	8657.40	PASS	AC=26;AF=0.481;AN=54;BaseQRankSum=-10.655;DP=416;FS=3.705;HRun=0;HaplotypeScore=109.0031;InbreedingCoeff=0.9463;MQ=74.74;MQ0=0;MQRankSum=-3.654;QD=44.63;ReadPosRankSum=-1.325;VQSLOD=5.0886;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:24.79:0,25,742	0/0:10,0:10:29.80:0,30,291	0/0:9,0:12:0.50:0,0,297	0/0:14,0:14:23.08:0,23,434	1/1:1,13:16:24.08:507,24,0	1/1:0,11:12:30.10:751,30,0	1/1:1,20:21:42:1008,42,0	1/1:3,1:11:18.06:317,18,0	0/0:13,0:13:34.42:0,34,328	1/1:1,0:10:24.05:381,24,0	1/1:5,0:14:9.03:211,9,0	1/1:0,14:15:36.12:915,36,0	1/1:2,18:22:42.14:1030,42,0	1/1:0,12:16:30.06:736,30,0	0/0:10,0:10:22.38:0,22,205	0/0:12,0:12:33.95:0,34,337	0/0:25,0:25:45.76:0,46,651	0/0:11,0:11:28.24:0,28,289	0/0:17,0:17:36.81:0,37,350	0/0:20,0:20:12.54:0,13,435	0/0:19,0:19:47.82:0,48,466	1/1:1,9:12:27.09:663,27,0	1/1:0,9:11:14.77:377,15,0	1/1:0,22:22:51.17:1266,51,0	1/1:0,10:12:21.07:496,21,0	0/0:14,0:14:32.71:0,33,420	0/0:10,0:10:23.90:0,24,240	./.
chr10	22550692	.	TTTAATTAA	T	7069.93	PASS	AB=0.550;AC=24;AF=0.444;AN=54;BaseQRankSum=-3.751;DP=381;FS=1.063;HRun=0;HaplotypeScore=127.9297;InbreedingCoeff=0.7604;MQ=60.81;MQ0=0;MQRankSum=-9.492;QD=36.26;ReadPosRankSum=1.158;VQSLOD=4.8082;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,18:27:42.20:1110,42,0	0/1:0,7:8:0.70:506,0,1	./.	0/0:3,0:3:0:0,0,0	0/0:5,0:16:38.94:0,39,412	0/0:2,0:14:35.97:0,36,329	0/0:3,0:8:11.99:0,12,99	0/0:40,0:45:96.32:0,96,2963	1/1:5,5:10:15.05:388,15,0	0/0:7,0:10:18.06:0,18,542	0/0:4,0:5:6.02:0,6,185	0/0:2,0:17:35.96:0,36,297	0/0:7,0:16:20.99:0,21,193	0/0:5,0:12:20.99:0,21,205	1/1:7,7:14:18.06:451,18,0	1/1:2,12:14:27.09:688,27,0	1/1:6,11:17:21.07:543,21,0	1/1:5,8:13:21.07:543,21,0	1/1:14,10:24:27.09:641,27,0	1/1:14,11:25:21.07:483,21,0	1/1:1,2:3:6.02:155,6,0	0/0:4,0:5:3:0,3,25	0/0:3,0:11:24.46:0,24,238	0/0:3,0:6:8.99:0,9,74	0/0:6,0:13:24:0,24,285	0/1:5,10:15:50.50:710,0,51	1/1:9,11:20:30.10:775,30,0	1/1:4,1:5:3.01:78,3,0
chr10	22551264	.	T	TC	7418.97	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=-17.420;DP=537;FS=0.348;HRun=8;HaplotypeScore=74.8670;InbreedingCoeff=0.9603;MQ=76.10;MQ0=0;MQRankSum=-0.447;QD=26.12;ReadPosRankSum=-0.566;VQSLOD=5.1794;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,23:27:69.18:783,69,0	1/1:1,8:9:18.05:208,18,0	0/0:14,0:14:26.74:0,27,218	0/0:14,0:13:4.07:0,4,95	0/0:3,0:30:55:0,55,162	0/0:1,0:30:50.26:0,50,148	0/0:3,0:14:20.37:0,20,60	1/1:17,15:32:45.13:519,45,0	1/1:1,11:12:24.07:277,24,0	1/1:3,11:14:33.10:381,33,0	1/1:1,22:23:66.19:756,66,0	0/0:0,0:16:30.56:0,31,90	0/0:0,0:30:57.04:0,57,168	0/0:0,0:24:42.55:0,43,125	1/1:2,10:12:27.08:312,27,0	1/1:4,11:15:5.65:319,6,0	1/1:0,22:22:66.20:760,66,0	1/1:0,14:14:39.12:450,39,0	1/1:5,11:16:33.10:381,33,0	1/1:4,20:24:57.04:612,57,0	1/1:2,12:14:24.07:277,24,0	0/0:2,0:22:40.52:0,41,119	0/0:1,0:24:44.80:0,45,132	0/0:1,0:14:26.04:0,26,77	0/0:1,0:20:36.67:0,37,108	1/1:2,12:14:33.10:381,33,0	1/1:3,25:28:66.20:761,66,0	1/1:1,7:8:21.06:242,21,0
chr10	22552494	.	TCACA	T	4331.58	PASS	AB=0.782;AC=43;AF=0.827;AN=52;BaseQRankSum=4.360;DP=590;FS=15.893;HRun=0;HaplotypeScore=139.3037;InbreedingCoeff=0.4933;MQ=59.47;MQ0=8;MQRankSum=-0.724;QD=9.30;ReadPosRankSum=3.030;VQSLOD=3.3789;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:28:8.34:56,8,0	1/1:9,0:13:8.23:62,8,0	./.	./.	1/1:9,9:18:19.94:254,20,0	1/1:15,0:27:18.02:168,18,0	1/1:12,11:22:24.08:365,24,0	0/0:29,0:29:21.06:0,21,295	1/1:8,0:19:23.94:202,24,0	0/0:24,0:24:42.09:0,42,747	0/0:17,0:16:15.05:0,15,310	1/1:14,7:22:6.17:211,6,0	1/1:17,5:21:32.90:457,33,0	1/1:9,14:24:33.10:490,33,0	1/1:11,0:20:20.99:187,21,0	1/1:11,0:24:32.95:288,33,0	1/1:17,0:27:14.12:138,14,0	1/1:9,0:14:1.09:25,1,0	1/1:13,0:15:3:27,3,0	1/1:4,0:12:14.90:115,15,0	0/1:15,0:16:0:0,0,0	0/1:11,10:21:41.53:190,0,42	1/1:8,6:16:17.42:223,17,0	1/1:28,15:43:30.10:466,30,0	1/1:5,7:13:8.10:205,8,0	0/1:22,0:29:34.13:122,0,34	1/1:8,0:11:6.01:54,6,0	1/1:1,0:4:3:28,3,0
chr10	22552673	.	TAC	T	2595.92	PASS	AB=1.000;AC=31;AF=0.554;AN=56;BaseQRankSum=-2.528;DP=644;FS=4.009;HRun=0;HaplotypeScore=199.4832;InbreedingCoeff=0.7117;MQ=61.46;MQ0=6;MQRankSum=1.791;QD=7.40;ReadPosRankSum=-0.040;VQSLOD=3.0255;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:22,1:23:26.55:320,27,0	1/1:15,0:15:9:80,9,0	0/0:28,0:23:38.95:0,39,351	0/0:33,0:27:53.57:0,54,453	0/0:33,0:33:41.62:0,42,329	0/0:27,0:26:35.54:0,36,255	0/0:24,0:23:40.72:0,41,306	1/1:24,9:33:59.95:526,60,0	1/1:12,0:12:14.97:121,15,0	1/1:23,0:23:5.06:381,5,0	1/1:30,0:30:8.87:70,9,0	0/0:25,0:25:24.92:0,25,131	0/0:29,0:29:48.81:0,49,309	0/0:24,0:23:40.47:0,40,266	0/1:19,0:19:33.16:155,0,33	1/1:16,2:18:26.48:271,26,0	0/1:20,0:19:7:43,0,7	1/1:15,0:15:3:26,3,0	1/1:18,0:18:27.72:309,28,0	1/1:28,0:28:8.73:59,9,0	1/1:18,0:17:3:25,3,0	0/0:13,0:13:5.51:0,6,192	0/1:21,0:21:1.35:1,0,120	0/0:27,0:27:24.65:0,25,172	0/0:30,0:30:26.16:0,26,345	1/1:20,0:20:38.45:272,38,0	1/1:25,0:25:17.38:98,17,0	1/1:13,0:12:10.66:46,11,0
chr10	22552681	.	CACACAG	C	2333.70	PASS	AB=1.000;AC=20;AF=0.357;AN=56;BaseQRankSum=2.758;DP=641;FS=14.269;HRun=0;HaplotypeScore=237.6335;InbreedingCoeff=0.4415;MQ=56.98;MQ0=6;MQRankSum=-0.381;QD=8.77;ReadPosRankSum=1.245;VQSLOD=1.3502;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:8.38:0,8,196	1/1:12,0:12:7.96:28,8,0	0/0:24,0:19:51.09:0,51,805	0/0:28,0:22:47.59:0,48,935	0/0:32,0:32:45.13:0,45,710	0/0:27,0:26:22.97:0,23,584	0/0:23,0:22:47.91:0,48,664	0/0:35,0:35:8.98:0,9,135	1/1:11,0:11:15.05:248,15,0	0/1:24,0:24:99:216,0,105	0/1:30,0:30:13.26:148,0,13	0/0:24,0:24:30.03:0,30,383	0/0:28,0:28:51.66:0,52,733	0/0:27,0:26:41.68:0,42,666	0/0:18,0:18:23.67:0,24,476	0/0:22,0:22:22.61:0,23,337	0/1:22,0:21:10.94:113,0,11	1/1:15,0:15:3.01:55,3,0	0/1:22,0:22:61.49:100,0,61	0/1:30,0:30:32.93:130,0,33	1/1:16,0:15:3.01:58,3,0	0/0:13,0:13:23.49:0,23,465	0/0:21,0:21:21.01:0,21,303	0/0:27,0:27:9.40:0,9,339	0/1:28,0:28:12.17:12,0,779	1/1:3,16:19:47.74:760,48,0	1/1:2,20:23:18.06:375,18,0	1/1:2,12:13:12.04:279,12,0
chr10	22552683	.	CACAGAG	C	4386.77	PASS	AB=0.950;AC=34;AF=0.607;AN=56;BaseQRankSum=-3.493;DP=627;FS=3.946;HRun=0;HaplotypeScore=227.1292;InbreedingCoeff=0.2461;MQ=56.00;MQ0=7;MQRankSum=1.676;QD=9.12;ReadPosRankSum=-0.898;VQSLOD=3.8363;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:26:84.80:255,0,85	1/1:0,1:12:9.47:79,9,0	0/0:22,0:17:38.95:0,39,351	0/0:28,0:22:51.08:0,51,449	0/0:31,0:31:41.83:0,42,354	0/1:27,0:26:7.30:7,0,233	0/0:24,0:23:39.06:0,39,301	1/1:30,0:30:59.52:526,60,0	1/1:0,10:11:15.05:334,15,0	1/1:4,20:25:14.12:655,14,0	1/1:1,29:30:8.72:208,9,0	0/1:24,0:24:8.61:9,0,98	0/0:28,0:28:12.37:0,12,263	0/1:26,0:25:20.98:21,0,241	0/1:17,0:17:99:107,0,332	0/1:21,0:21:99:106,0,291	0/1:3,18:20:3.15:170,0,3	1/1:2,13:15:2.71:72,3,0	1/1:5,17:22:16.05:486,16,0	1/1:4,24:28:9.03:198,9,0	1/1:1,15:15:3.01:72,3,0	0/0:12,0:13:9.73:0,10,220	0/1:22,0:21:1.35:1,0,120	0/1:26,0:26:16.37:16,0,145	0/1:27,1:28:99:106,0,335	1/1:16,2:18:39.57:483,40,0	1/1:22,0:22:18.04:271,18,0	1/1:14,0:13:12.04:203,12,0
chr10	22552685	.	CAGAG	C	3497.04	PASS	AB=0.841;AC=42;AF=0.808;AN=52;BaseQRankSum=5.421;DP=621;FS=0.917;HRun=0;HaplotypeScore=214.3604;InbreedingCoeff=0.5408;MQ=55.71;MQ0=7;MQRankSum=-4.389;QD=7.30;ReadPosRankSum=-0.598;VQSLOD=2.8511;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:8.98:0,9,135	1/1:12,0:12:9.50:105,9,0	./.	./.	0/1:16,14:30:0.27:0,0,0	1/1:17,6:25:11.11:166,11,0	1/1:15,9:23:12.51:187,13,0	0/0:30,0:30:0:0,0,0	1/1:11,0:11:15.03:157,15,0	1/1:23,0:24:21.04:238,21,0	1/1:29,0:29:8.82:95,9,0	1/1:6,17:23:27.09:406,27,0	1/1:12,16:28:32.60:490,33,0	1/1:15,10:25:33.09:486,33,0	0/0:18,0:18:21.07:0,21,405	0/0:20,0:20:30.02:0,30,384	1/1:22,0:21:8.30:105,8,0	1/1:15,0:16:3.01:35,3,0	0/1:24,0:24:43.94:170,0,44	1/1:25,1:27:8.86:90,9,0	1/1:16,0:15:3.01:34,3,0	1/1:10,3:13:6.02:87,6,0	1/1:9,12:21:2.91:44,3,0	1/1:19,5:25:6.01:91,6,0	1/1:18,8:27:18.06:263,18,0	1/1:18,0:18:15.53:110,16,0	1/1:22,0:22:12.62:86,13,0	1/1:14,0:13:11.16:51,11,0
chr10	22552868	.	GT	G	5905.13	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-16.164;DP=537;FS=7.620;HRun=9;HaplotypeScore=92.6240;InbreedingCoeff=0.9567;MQ=70.60;MQ0=0;MQRankSum=-0.031;QD=22.71;ReadPosRankSum=0.086;VQSLOD=5.0756;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:26:32.47:0,32,250	0/0:1,0:8:17.04:0,17,87	0/0:12,0:11:6.88:0,7,211	0/0:15,0:13:11.66:0,12,202	1/1:1,26:27:75.04:685,75,0	1/1:1,14:15:36.02:329,36,0	1/1:3,8:11:17.99:165,18,0	1/1:4,19:23:57.02:520,57,0	0/0:1,0:16:37.03:0,37,191	1/1:1,30:31:90.05:824,90,0	1/1:1,23:24:57.02:522,57,0	1/1:3,18:21:47.05:418,47,0	1/1:4,22:26:44.62:579,45,0	1/1:3,13:16:36.01:328,36,0	0/0:2,0:26:56.68:0,57,285	0/0:1,0:12:20.43:0,20,145	0/0:1,0:20:39.77:0,40,202	0/0:3,0:11:26.14:0,26,126	0/0:4,0:24:38.19:0,38,222	0/0:2,0:27:50.14:0,50,259	0/0:4,0:15:34.52:0,35,173	1/1:1,16:17:48.03:438,48,0	1/1:1,16:17:39.02:357,39,0	1/1:0,11:11:30.02:275,30,0	1/1:0,21:21:51.03:467,51,0	0/0:3,2:28:3.37:0,3,205	0/0:4,0:28:53.80:0,54,270	0/0:2,0:9:22.56:0,23,112
chr10	22554827	.	TG	T	3006.12	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=7.859;DP=519;FS=0.930;HRun=1;HaplotypeScore=90.4606;InbreedingCoeff=0.9974;MQ=80.75;MQ0=0;MQRankSum=-2.258;QD=35.79;ReadPosRankSum=-2.080;VQSLOD=3.0465;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:9:27.07:0,27,431	0/0:9,0:9:27.06:0,27,405	0/0:9,0:9:26.29:0,26,368	0/0:17,0:17:51.10:0,51,691	0/0:44,0:44:99:0,132,2035	0/0:24,0:24:72.19:0,72,1063	0/0:10,0:10:30.08:0,30,452	1/1:0,33:33:93.30:1202,93,0	0/0:15,0:15:45.15:0,45,719	1/1:0,26:27:81.25:1034,81,0	1/1:0,24:24:72.17:913,72,0	0/0:12,0:12:36.12:0,36,567	0/0:19,0:19:57.19:0,57,890	0/0:20,0:20:60.19:0,60,936	0/0:19,0:19:57.18:0,57,888	0/0:9,0:9:27.08:0,27,409	0/0:11,0:11:33.11:0,33,527	0/0:12,0:12:30.10:0,30,479	0/0:15,0:15:45.13:0,45,676	0/0:26,0:26:72.25:0,72,1151	0/0:17,0:17:51.17:0,51,812	0/0:23,0:23:69.22:0,69,1077	0/0:27,0:27:81.26:0,81,1271	0/0:10,0:10:30.08:0,30,454	0/0:20,0:20:60.20:0,60,959	0/0:17,0:17:51.17:0,51,816	0/0:31,0:31:93.29:0,93,1439	0/0:9,0:9:27.09:0,27,431
chr10	22555472	.	T	TAA	8220.05	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=13.703;DP=553;FS=9.943;HRun=9;HaplotypeScore=79.8882;InbreedingCoeff=0.9867;MQ=79.33;MQ0=0;MQRankSum=-4.556;QD=34.83;ReadPosRankSum=1.033;VQSLOD=4.5273;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,17:21:57.62:835,58,0	1/1:2,10:12:24.04:343,24,0	0/0:14,0:14:36.03:0,36,364	0/0:14,0:14:30.06:0,30,318	0/0:28,0:28:78.16:0,78,822	0/0:23,0:23:48.04:0,48,511	0/0:18,0:18:48.10:0,48,503	0/0:27,0:27:60.12:0,60,639	1/1:3,24:27:81.13:1167,81,0	0/0:32,0:32:87.18:0,87,919	0/0:21,0:22:59.87:0,60,619	0/0:22,0:23:56.94:0,57,581	0/0:28,0:28:66.10:0,66,702	0/0:24,0:24:69.17:0,69,734	1/1:0,16:17:45.11:666,45,0	1/1:2,19:21:48.16:739,48,0	1/1:1,13:14:27.09:416,27,0	1/1:1,5:6:12:158,12,0	1/1:3,6:11:24.04:317,24,0	1/1:3,20:24:65.67:938,66,0	1/1:1,7:9:8.99:112,9,0	0/0:13,0:13:29.99:0,30,291	0/0:12,0:12:30.05:0,30,319	0/0:17,0:17:51.13:0,51,543	0/0:22,0:22:60.13:0,60,632	1/1:2,19:21:57.18:854,57,0	1/1:9,28:38:58.34:1269,58,0	1/1:2,11:15:32.04:406,32,0
chr10	22556185	.	T	TA	1951.15	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-9.818;DP=507;FS=1.701;HRun=7;HaplotypeScore=67.9598;InbreedingCoeff=0.9887;MQ=59.45;MQ0=2;MQRankSum=3.424;QD=28.28;ReadPosRankSum=-2.130;VQSLOD=3.5708;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:32:90.04:0,90,839	0/0:9,0:9:27.03:0,27,255	0/0:20,0:14:42:0,42,384	0/0:13,0:8:13.83:0,14,143	0/0:23,0:23:57.07:0,57,542	0/0:21,0:21:60.10:0,60,579	0/0:17,0:17:45.07:0,45,435	1/1:5,25:28:72.22:865,72,0	0/0:8,0:8:18.03:0,18,173	1/1:3,19:22:57.16:675,57,0	1/1:1,16:17:48.06:554,48,0	0/0:16,0:16:42.06:0,42,401	0/0:13,0:13:39.06:0,39,376	0/0:12,0:12:30.03:0,30,284	0/0:20,0:20:57.08:0,57,545	0/0:24,0:24:54.08:0,54,521	0/0:19,0:19:45.07:0,45,434	0/0:16,0:16:39.06:0,39,376	0/0:17,0:17:48.08:0,48,463	0/0:15,0:15:36.04:0,36,342	0/0:15,0:15:45.05:0,45,427	0/0:17,0:17:39.05:0,39,376	0/0:11,0:11:33.04:0,33,314	0/0:21,0:21:51.08:0,51,492	0/0:12,0:12:30.03:0,30,284	0/0:25,1:26:35.87:0,36,630	0/0:23,0:23:57.08:0,57,545	0/0:18,0:18:54.09:0,54,520
chr10	22556786	.	CAG	C	12768.66	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=17.765;DP=651;FS=4.871;HRun=0;HaplotypeScore=94.9076;InbreedingCoeff=0.9874;MQ=70.11;MQ0=1;MQRankSum=-1.007;QD=42.85;ReadPosRankSum=3.893;VQSLOD=6.7862;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,39:38:99:1610,99,0	1/1:0,8:8:18.06:293,18,0	0/0:11,0:11:19.41:0,19,405	0/0:7,0:7:8.28:0,8,233	0/0:30,0:30:90.23:0,90,1633	0/0:25,0:25:75.23:0,75,1450	0/0:27,0:27:81.24:0,81,1524	0/0:32,0:32:96.28:0,96,1697	1/1:0,18:18:51.17:828,51,0	0/0:21,0:21:63.21:0,63,1244	0/0:22,0:22:66.21:0,66,1274	0/0:21,0:21:63.20:0,63,1233	0/0:26,0:26:78.24:0,78,1474	0/0:32,0:32:93.32:0,93,1855	1/1:0,28:28:72.25:1171,72,0	1/1:0,17:17:51.17:830,51,0	1/1:0,29:29:81.28:1317,81,0	1/1:0,10:10:27.09:437,27,0	1/1:0,10:10:27.09:435,27,0	1/1:0,28:28:72.25:1163,72,0	1/1:0,30:30:75.26:1217,75,0	0/0:27,0:27:81.28:0,81,1612	0/0:19,0:19:57.20:0,57,1157	0/0:14,0:14:42.14:0,42,853	0/0:39,0:39:99:0,117,2339	1/1:0,27:27:81.28:1311,81,0	1/1:0,44:44:99:1878,117,0	1/1:0,10:10:18.06:278,18,0
chr10	22557106	.	CA	C	10927.74	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=9.663;DP=652;FS=8.576;HRun=1;HaplotypeScore=87.1248;InbreedingCoeff=0.9999;MQ=81.04;MQ0=0;MQRankSum=-2.126;QD=36.67;ReadPosRankSum=4.383;VQSLOD=4.9725;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,21:21:48.16:671,48,0	1/1:0,15:15:42.14:586,42,0	0/0:21,0:21:63.16:0,63,885	0/0:14,0:14:39.12:0,39,573	0/0:27,0:27:72.14:0,72,1063	0/0:21,0:21:57.19:0,57,868	0/0:20,0:20:60.11:0,60,789	0/0:32,0:32:93.29:0,93,1368	1/1:0,26:26:69.23:964,69,0	0/0:32,0:32:93.23:0,93,1355	0/0:19,0:19:57.17:0,57,828	0/0:20,0:20:60.02:0,60,862	0/0:27,0:27:78.18:0,78,1137	0/0:25,0:25:75.25:0,75,1142	1/1:0,24:24:69.23:964,69,0	1/1:0,24:24:57.19:797,57,0	1/1:0,30:30:90.26:1236,90,0	1/1:0,20:20:48.16:671,48,0	1/1:0,23:23:69.06:831,69,0	1/1:0,30:30:84.28:1171,84,0	1/1:0,16:16:36.12:503,36,0	0/0:18,0:18:54.17:0,54,802	0/0:22,0:22:60.11:0,60,825	0/0:20,0:20:60.20:0,60,916	0/0:36,0:36:99:0,108,1649	1/1:0,23:23:66.22:921,66,0	1/1:0,31:31:84.24:1152,84,0	1/1:0,15:15:33.11:461,33,0
chr10	22557348	.	GGTGTGTGT	G	4191.55	PASS	AB=0.808;AC=24;AF=0.480;AN=50;BaseQRankSum=1.988;DP=744;FS=74.749;HRun=0;HaplotypeScore=207.4739;InbreedingCoeff=0.6611;MQ=61.86;MQ0=17;MQRankSum=-5.272;QD=10.75;ReadPosRankSum=-1.224;VQSLOD=-0.1776;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:18,26:46:8.80:222,9,0	1/1:6,9:15:12.04:279,12,0	./.	0/1:39,0:22:0:0,0,0	0/0:17,0:21:11.82:0,12,226	0/0:24,0:30:27.78:0,28,405	0/0:30,0:37:32.59:0,33,441	0/0:24,0:23:6.73:0,7,23	1/1:14,17:32:26.93:601,27,0	0/1:11,0:18:18.78:51,0,19	0/1:12,0:14:12:37,0,12	0/0:20,0:26:18.45:0,18,334	0/0:33,0:33:17.67:0,18,213	0/0:20,0:25:33.53:0,34,500	1/1:16,14:30:14.84:375,15,0	1/1:7,14:21:26.88:614,27,0	0/1:11,9:21:1.71:122,0,2	./.	1/1:22,0:24:7.74:170,8,0	1/1:10,14:23:12.04:257,12,0	1/1:43,1:49:1.35:351,1,0	0/0:12,0:13:6.01:0,6,101	0/0:21,0:29:18.87:0,19,237	0/0:31,0:31:14.99:0,15,145	0/0:30,0:31:33.06:0,33,624	1/1:17,11:27:33.06:587,33,0	1/1:14,14:28:19.90:524,20,0	./.
chr10	22557387	.	G	GTGTGTGTGTC	3548.24	PASS	AB=0.857;AC=24;AF=0.429;AN=56;BaseQRankSum=-6.580;DP=663;FS=6.792;HRun=0;HaplotypeScore=217.9066;InbreedingCoeff=0.5494;MQ=53.85;MQ0=21;MQRankSum=3.114;QD=8.92;ReadPosRankSum=-3.013;VQSLOD=1.5812;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:42.03:0,42,399	0/0:12,0:12:4.02:0,4,170	0/0:8,0:4:8.94:0,9,71	0/0:14,0:8:14.52:0,15,121	1/1:15,0:14:17.99:224,18,0	1/1:22,0:23:28.84:409,29,0	1/1:32,0:32:20.84:488,21,0	1/1:25,0:22:41.75:328,42,0	0/0:30,0:30:33.81:0,34,645	0/1:20,0:20:99:218,0,107	0/1:17,0:16:94.43:94,0,95	1/1:23,0:23:33.71:322,34,0	1/1:35,0:34:37.15:466,37,0	1/1:30,0:29:3.51:276,4,0	0/0:31,0:30:56.56:0,57,633	0/0:27,0:27:31.96:0,32,525	0/0:24,0:24:44.72:0,45,393	0/0:6,0:6:10.35:0,10,148	0/0:16,0:14:13.01:0,13,111	0/0:24,0:22:32.99:0,33,378	0/1:43,0:42:26.63:27,0,265	1/1:9,0:9:15:165,15,0	1/1:25,0:24:29.63:273,30,0	0/1:6,27:37:0:0,0,0	0/1:14,0:41:39.94:254,0,40	0/1:20,0:17:4.10:4,0,306	0/0:23,0:23:44.60:0,45,633	0/0:3,0:2:5.98:0,6,47
chr10	22557391	.	GTC	G	589.56	PASS	AB=0.932;AC=13;AF=0.232;AN=56;BaseQRankSum=1.117;DP=675;FS=19.580;HRun=0;HaplotypeScore=153.0482;InbreedingCoeff=-0.3136;MQ=54.86;MQ0=20;MQRankSum=1.887;QD=1.84;ReadPosRankSum=-4.327;VQSLOD=-0.6932;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:38.11:0,38,299	0/0:12,0:12:0.62:0,1,47	0/0:11,0:7:10.90:0,11,100	0/1:18,0:10:18.83:19,0,67	0/1:15,0:14:16.76:17,0,153	0/1:22,1:23:99:139,0,207	0/1:28,4:32:99:136,0,330	0/0:26,0:23:62.44:0,62,476	0/0:31,0:31:22.49:0,22,259	0/0:21,0:21:51.72:0,52,421	0/0:16,0:15:23.55:0,24,192	0/1:22,1:23:26.68:27,0,238	0/1:21,14:34:75.60:76,0,345	0/1:28,0:27:46.49:46,0,234	0/0:32,0:31:54.63:0,55,407	0/0:28,0:28:25.44:0,25,214	0/0:25,0:25:43.08:0,43,330	0/1:5,0:5:7.11:7,0,64	0/0:19,0:17:26.12:0,26,234	0/0:25,0:23:34.01:0,34,260	0/1:42,1:42:25.95:26,0,292	0/1:8,3:11:20.72:21,0,151	0/1:21,2:22:96.17:108,0,96	0/0:35,0:34:5.99:0,6,50	0/1:38,4:40:99:113,0,101	0/1:22,0:19:2.13:2,0,162	0/0:24,0:24:37.19:0,37,243	0/0:3,0:2:5.99:0,6,50
chr10	22557788	.	AC	A	3806.71	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=1.873;DP=784;FS=0.815;HRun=1;HaplotypeScore=185.8648;InbreedingCoeff=0.9996;MQ=80.69;MQ0=0;MQRankSum=-1.990;QD=39.24;ReadPosRankSum=-5.457;VQSLOD=1.8248;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,126,1850	0/0:10,0:10:30.10:0,30,449	0/0:25,0:25:74.97:0,75,961	0/0:17,0:17:39.41:0,39,596	0/0:24,0:24:72.23:0,72,1048	0/0:23,0:23:69.20:0,69,989	0/0:29,0:29:87.25:0,87,1239	1/1:0,38:38:99:1486,114,0	0/0:32,0:32:96.24:0,96,1351	1/1:0,44:44:99:1745,129,0	1/1:0,15:15:45.06:576,45,0	0/0:26,0:26:78.26:0,78,1166	0/0:40,0:40:99:0,120,1793	0/0:33,0:33:99:0,99,1417	0/0:38,0:38:99:0,111,1618	0/0:37,0:37:99:0,111,1620	0/0:30,0:30:90.24:0,90,1300	0/0:14,0:14:42.14:0,42,628	0/0:26,0:26:68.93:0,69,956	0/0:28,0:28:81.01:0,81,1089	0/0:37,0:36:99:0,108,1544	0/0:23,0:23:66.20:0,66,958	0/0:24,0:24:72.18:0,72,1047	0/0:30,0:30:90.29:0,90,1323	0/0:30,0:30:87.25:0,87,1237	0/0:31,0:31:93.29:0,93,1352	0/0:28,0:28:84.27:0,84,1231	0/0:10,0:10:30.08:0,30,427
chr10	22558131	.	CATG	C	3667.21	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=10.170;DP=713;FS=0.934;HRun=0;HaplotypeScore=133.3834;InbreedingCoeff=0.9887;MQ=80.48;MQ0=0;MQRankSum=-4.240;QD=40.75;ReadPosRankSum=-1.745;VQSLOD=4.5267;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:81.28:0,81,1805	0/0:15,0:15:45.15:0,45,1002	0/0:17,0:17:48.16:0,48,1022	0/0:19,0:19:52.70:0,53,974	0/0:27,0:27:81.26:0,81,1792	0/0:39,0:39:99:0,105,2369	0/0:22,0:22:66.21:0,66,1443	1/1:4,24:28:72.22:1144,72,0	0/0:28,0:28:84.29:0,84,1894	1/1:2,34:36:99:1624,99,0	1/1:0,25:26:54.18:899,54,0	0/0:33,0:33:96.32:0,96,2102	0/0:30,0:30:90.31:0,90,1994	0/0:39,0:39:99:0,114,2529	0/0:37,0:37:99:0,111,2410	0/0:23,0:23:69.24:0,69,1535	0/0:21,0:21:63.22:0,63,1419	0/0:5,0:5:15.05:0,15,340	0/0:11,0:11:33.11:0,33,724	0/0:32,0:32:93.32:0,93,2080	0/0:24,0:24:72.25:0,72,1603	0/0:27,0:27:81.28:0,81,1816	0/0:26,0:26:75.26:0,75,1671	0/0:18,0:18:51.18:0,51,1140	0/0:33,0:33:93.31:0,93,2056	0/0:27,0:27:75.25:0,75,1643	0/0:36,0:36:99:0,105,2361	0/0:5,0:5:15.05:0,15,319
chr10	22559432	.	A	AATT	23733.51	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-4.809;DP=562;FS=6.796;HRun=0;HaplotypeScore=60.6189;InbreedingCoeff=0.9192;MQ=49.77;MQ0=4;MQRankSum=2.207;QD=44.61;ReadPosRankSum=3.275;VQSLOD=6.3878;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,25:26:66.23:1388,66,0	1/1:2,8:10:21.07:444,21,0	0/0:18,0:8:6.46:0,6,231	0/0:12,0:5:12.04:0,12,189	1/1:5,25:29:48.16:1004,48,0	1/1:6,11:15:30.10:642,30,0	1/1:3,14:17:39.13:839,39,0	1/1:6,14:19:36.12:786,36,0	1/1:2,17:19:48.16:1048,48,0	1/1:3,15:18:45.15:942,45,0	1/1:3,20:23:54.19:1178,54,0	1/1:3,18:21:48.16:1049,48,0	1/1:2,12:15:36.12:772,36,0	1/1:2,19:18:42.14:915,42,0	1/1:3,15:17:36.12:787,36,0	1/1:4,17:21:45.15:983,45,0	1/1:3,12:13:27.09:575,27,0	1/1:1,5:7:15.05:328,15,0	1/1:9,13:20:42.14:917,42,0	1/1:4,16:22:51.11:997,51,0	1/1:2,13:15:36.08:741,36,0	1/1:4,17:21:39.09:806,39,0	1/1:2,24:26:60.18:1310,60,0	1/1:1,17:19:39.13:836,39,0	1/1:5,20:24:54.19:1167,54,0	1/1:3,17:19:45.15:952,45,0	1/1:5,30:35:81.28:1758,81,0	1/1:10,7:15:33.07:571,33,0
chr10	22559555	.	TG	T	4738.11	PASS	AB=0.911;AC=28;AF=0.500;AN=56;BaseQRankSum=2.018;DP=571;FS=1.848;HRun=10;HaplotypeScore=58.7622;InbreedingCoeff=0.7877;MQ=53.31;MQ0=26;MQRankSum=-0.722;QD=15.79;ReadPosRankSum=4.433;VQSLOD=5.3004;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:14,30:40:79.97:682,80,0	1/1:2,3:4:9:78,9,0	0/0:19,0:7:4.56:0,5,33	0/0:23,1:9:11.33:0,11,97	0/0:17,0:16:30.07:0,30,324	0/0:20,0:17:32.83:0,33,343	0/0:19,1:18:10.04:0,10,329	0/0:17,0:14:18.05:0,18,199	1/1:1,14:15:41.99:364,42,0	0/0:19,0:16:24.05:0,24,257	0/0:16,2:16:1.43:0,1,230	0/0:24,0:19:35.97:0,36,358	0/0:26,0:25:48.13:0,48,527	0/0:26,1:20:23.83:0,24,389	1/1:3,16:19:44.99:391,45,0	1/1:1,19:21:61.01:499,61,0	1/1:7,25:28:65.95:567,66,0	1/1:6,21:26:61.06:507,61,0	1/1:1,12:13:35.87:301,36,0	1/1:3,7:9:12:104,12,0	1/1:12,21:32:35.60:470,36,0	0/1:17,2:15:28.06:28,0,166	0/0:11,0:9:9:0,9,84	0/0:27,0:25:53.78:0,54,574	0/1:10,1:11:5:5,0,178	1/1:6,9:15:20.95:176,21,0	1/1:6,23:25:53.94:462,54,0	1/1:0,5:5:12:104,12,0
chr10	22560646	.	TG	T	7351.13	PASS	AB=1.000;AC=51;AF=0.944;AN=54;BaseQRankSum=-5.259;DP=220;FS=0.000;HRun=1;HaplotypeScore=30.7897;InbreedingCoeff=0.2730;MQ=87.27;MQ0=0;MQRankSum=-4.196;QD=35.01;ReadPosRankSum=3.676;VQSLOD=4.2395;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,3:3:9.03:126,9,0	1/1:0,2:2:6.02:84,6,0	0/0:10,0:6:8.45:0,8,92	0/1:25,0:18:19.37:19,0,96	1/1:0,6:6:18.06:252,18,0	1/1:0,9:9:27.09:378,27,0	1/1:0,1:1:3.01:42,3,0	1/1:0,44:44:99:1767,129,0	1/1:0,4:4:12.04:168,12,0	1/1:0,2:2:6.02:83,6,0	1/1:0,3:3:9.03:126,9,0	1/1:0,7:7:18.06:251,18,0	1/1:0,3:3:9.03:126,9,0	1/1:0,1:1:3.01:42,3,0	1/1:0,3:3:9.03:126,9,0	1/1:0,4:4:9.03:126,9,0	1/1:0,18:18:51.17:713,51,0	1/1:0,11:11:30.10:419,30,0	1/1:0,15:15:45.14:615,45,0	1/1:0,7:7:21.07:294,21,0	1/1:0,4:4:9.03:126,9,0	./.	1/1:0,3:3:9.03:126,9,0	1/1:0,3:3:9.03:126,9,0	1/1:0,6:6:18.06:252,18,0	1/1:0,2:2:6.02:84,6,0	1/1:0,8:8:18.06:252,18,0	1/1:0,16:16:45.15:629,45,0
chr10	22560744	.	G	GAT	1186.53	PASS	AB=1.000;AC=18;AF=0.333;AN=54;BaseQRankSum=-5.090;DP=208;FS=9.092;HRun=0;HaplotypeScore=22.9140;InbreedingCoeff=0.5932;MQ=81.57;MQ0=1;MQRankSum=-0.056;QD=28.94;ReadPosRankSum=1.595;VQSLOD=3.4420;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:8:21.07:0,21,267	0/0:1,0:1:3.01:0,3,38	0/0:4,0:4:3.01:0,3,38	0/0:13,0:11:8.32:0,8,99	1/1:1,6:6:15.05:251,15,0	1/1:0,13:13:36.12:602,36,0	1/1:0,2:3:6.02:100,6,0	0/0:42,0:42:99:0,105,1324	0/0:3,0:3:9.03:0,9,114	0/0:6,0:6:15.05:0,15,191	0/0:4,0:4:9.03:0,9,115	1/1:1,1:2:3.01:50,3,0	1/1:0,1:1:3.01:50,3,0	1/1:0,4:4:9.03:151,9,0	0/0:5,0:5:15.05:0,15,191	0/0:7,0:7:18.06:0,18,229	0/0:14,0:14:33.09:0,33,406	0/0:6,0:6:18.06:0,18,226	0/0:24,0:24:60.19:0,60,755	0/1:6,0:6:9.90:10,0,138	0/0:4,0:4:12.04:0,12,152	1/1:0,1:1:3.01:50,3,0	1/1:1,1:2:3.01:50,3,0	./.	0/1:2,0:2:32.18:44,0,32	0/0:7,0:7:15.05:0,15,191	0/0:8,0:8:18.06:0,18,229	0/0:9,0:9:27.09:0,27,343
chr10	22561029	.	G	GAT	2201.49	PASS	AB=0.715;AC=16;AF=0.308;AN=52;BaseQRankSum=-6.594;DP=311;FS=9.414;HRun=0;HaplotypeScore=42.1346;InbreedingCoeff=0.6254;MQ=70.71;MQ0=2;MQRankSum=2.009;QD=25.60;ReadPosRankSum=2.736;VQSLOD=3.6371;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:23.86:0,24,275	./.	0/0:8,0:5:5.22:0,5,32	0/1:6,0:4:5.78:6,0,28	0/1:6,0:13:8.20:156,0,8	1/1:0,17:17:39.13:648,39,0	0/1:1,4:5:25.82:138,0,26	0/0:38,0:39:87.10:0,87,1060	0/0:14,0:14:39.12:0,39,491	0/0:24,0:24:63.20:0,63,794	0/0:10,0:10:27.09:0,27,340	1/1:1,7:8:18.06:299,18,0	1/1:1,5:6:15.05:249,15,0	0/1:2,2:4:28.79:91,0,29	0/0:9,0:9:21.07:0,21,265	0/0:13,0:13:36.12:0,36,454	0/0:7,0:7:18.06:0,18,227	0/0:12,0:12:33.10:0,33,408	0/0:15,0:15:30.09:0,30,372	0/0:10,0:10:27.06:0,27,313	0/0:11,0:11:30.06:0,30,350	./.	1/1:1,4:5:9.03:150,9,0	1/1:2,5:7:12.04:199,12,0	1/1:3,11:14:27.09:449,27,0	0/0:11,0:11:27.09:0,27,339	0/0:22,0:21:54.16:0,54,668	0/0:7,0:7:21.07:0,21,265
chr10	22561221	.	AT	A	3513.32	PASS	AB=0.875;AC=22;AF=0.393;AN=56;BaseQRankSum=-1.113;DP=511;FS=20.629;HRun=10;HaplotypeScore=65.4190;InbreedingCoeff=0.8473;MQ=76.10;MQ0=0;MQRankSum=-0.859;QD=17.39;ReadPosRankSum=5.466;VQSLOD=2.6346;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:21.04:0,21,222	0/0:13,0:13:36.10:0,36,398	0/0:19,0:13:15.09:0,15,201	0/0:18,0:16:35.32:0,35,300	1/1:3,21:24:56.96:495,57,0	1/1:4,26:30:71.97:625,72,0	1/1:3,11:14:20.97:182,21,0	0/0:22,0:22:42.11:0,42,457	0/0:16,0:16:42.11:0,42,465	0/0:30,1:31:55.16:0,55,831	0/0:21,0:21:54.14:0,54,591	1/1:1,22:23:59.99:521,60,0	1/1:1,24:25:53.99:469,54,0	1/1:1,10:11:20.99:182,21,0	0/0:18,0:18:51.11:0,51,546	0/0:18,0:17:48.13:0,48,531	0/1:12,2:14:13.03:13,0,307	0/1:6,1:7:11:11,0,117	0/0:22,0:22:31.12:0,31,557	0/0:23,0:23:57.15:0,57,623	0/0:15,0:15:30.08:0,30,331	1/1:3,5:8:14.97:130,15,0	1/1:2,8:10:20.99:182,21,0	1/1:0,9:9:24:208,24,0	1/1:6,21:27:56.98:495,57,0	0/0:23,0:24:66.01:0,66,711	0/0:33,0:33:84.22:0,84,921	0/0:7,0:7:12.03:0,12,133
chr10	22561810	.	C	CATT	6715.35	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-11.686;DP=457;FS=23.743;HRun=0;HaplotypeScore=72.3978;InbreedingCoeff=0.9850;MQ=75.37;MQ0=0;MQRankSum=-1.042;QD=58.39;ReadPosRankSum=2.243;VQSLOD=4.0756;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:19:48.14:0,48,773	0/0:4,0:4:12.04:0,12,200	0/0:7,0:7:21.07:0,21,349	0/0:13,0:13:33.11:0,33,550	0/0:10,0:10:30.10:0,30,500	1/1:2,16:18:51.13:1104,51,0	1/1:0,11:10:27.09:612,27,0	0/0:37,0:37:99:0,99,1626	0/0:14,0:14:30.81:0,31,639	0/0:24,0:24:69.24:0,69,1149	0/0:25,0:25:72.22:0,72,1150	1/1:2,11:13:33.11:746,33,0	1/1:1,11:11:33.11:742,33,0	1/1:0,13:13:36.12:816,36,0	0/0:26,0:26:69.24:0,69,1144	0/0:18,0:18:51.17:0,51,849	0/0:11,0:11:30.10:0,30,500	0/0:11,0:11:33.11:0,33,549	0/0:15,0:15:37.92:0,38,647	0/0:30,0:30:90.31:0,90,1499	0/0:9,0:9:24.06:0,24,351	1/1:3,12:15:42.10:872,42,0	1/1:1,9:10:24.08:542,24,0	1/1:2,4:5:9.50:205,10,0	1/1:2,15:17:51.13:1077,51,0	0/0:27,0:27:66.73:0,67,1237	0/0:26,0:26:71.78:0,72,1167	0/0:15,0:15:39.13:0,39,650
chr10	22561915	.	A	AC	11335.22	PASS	AB=0.875;AC=53;AF=0.946;AN=56;BaseQRankSum=-4.012;DP=508;FS=33.247;HRun=1;HaplotypeScore=76.8715;InbreedingCoeff=-0.0824;MQ=59.76;MQ0=54;MQRankSum=0.725;QD=22.31;ReadPosRankSum=1.812;VQSLOD=3.1916;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,23:27:51.15:699,51,0	1/1:1,10:11:30.10:430,30,0	0/1:34,6:15:99:102,0,146	0/1:41,2:7:60.87:61,0,69	1/1:7,16:20:45.04:640,45,0	1/1:1,10:11:12.04:179,12,0	1/1:1,7:7:12.04:180,12,0	1/1:3,17:20:51.12:683,51,0	1/1:0,13:13:33.09:412,33,0	1/1:8,15:18:39.13:580,39,0	1/1:2,13:14:38.98:505,39,0	1/1:5,11:14:12.04:180,12,0	1/1:5,13:15:1.14:249,1,0	1/1:3,11:12:20.96:276,21,0	1/1:2,13:14:33.06:416,33,0	1/1:3,20:21:57.13:741,57,0	1/1:2,13:14:33.11:470,33,0	1/1:7,9:11:23.36:284,23,0	1/1:5,22:23:66.12:901,66,0	1/1:0,24:24:66.11:919,66,0	1/1:4,8:9:18.06:265,18,0	1/1:4,4:4:6.02:90,6,0	1/1:4,4:7:12.03:163,12,0	1/1:3,5:6:3.01:45,3,0	1/1:3,9:12:15.05:225,15,0	1/1:3,20:22:57.19:849,57,0	1/1:1,19:20:32.46:675,32,0	0/1:9,3:4:26.37:117,0,26
chr10	22566630	.	G	GT	7124.75	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-8.599;DP=596;FS=6.323;HRun=4;HaplotypeScore=98.7696;InbreedingCoeff=0.9842;MQ=82.40;MQ0=0;MQRankSum=-2.820;QD=34.75;ReadPosRankSum=3.849;VQSLOD=4.7213;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:48.10:0,48,523	0/0:11,0:11:30.08:0,30,339	0/0:18,0:18:51.13:0,51,557	0/0:18,0:18:36.07:0,36,402	1/1:1,34:35:99:1372,102,0	1/1:1,15:16:39.13:533,39,0	1/1:3,13:16:30.10:410,30,0	0/0:28,0:28:75.21:0,75,851	0/0:18,0:18:54.08:0,54,578	0/0:19,0:19:57.15:0,57,638	0/0:25,0:25:72.19:0,72,805	1/1:1,14:15:42.14:563,42,0	1/1:3,15:18:42.14:574,42,0	1/1:0,19:19:57.19:780,57,0	0/0:32,0:32:87.22:0,87,968	0/0:18,0:18:54.15:0,54,613	0/0:30,0:30:90.26:0,90,1021	0/0:13,0:13:33.04:0,33,358	0/0:33,0:33:87.23:0,87,975	0/0:21,0:21:63.18:0,63,715	0/0:18,0:17:51.14:0,51,579	1/1:1,14:15:33.07:430,33,0	1/1:2,22:24:59.91:820,60,0	1/1:2,18:20:51.17:697,51,0	1/1:1,26:27:69.23:944,69,0	0/0:28,0:28:84.24:0,84,953	0/0:43,0:42:99:0,126,1409	0/0:2,0:2:6.02:0,6,68
chr10	22567516	.	AT	A	12205.17	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-4.046;DP=551;FS=0.000;HRun=9;HaplotypeScore=59.6905;InbreedingCoeff=0.9133;MQ=67.98;MQ0=0;MQRankSum=-4.435;QD=23.03;ReadPosRankSum=3.909;VQSLOD=5.4897;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,22:25:63.03:577,63,0	1/1:1,8:9:24.01:220,24,0	0/0:13,0:13:29.20:0,29,306	0/0:8,0:7:9.02:0,9,98	1/1:5,24:29:74.07:665,74,0	1/1:2,23:25:37.42:597,37,0	1/1:1,12:13:27.01:247,27,0	1/1:6,31:37:90.01:814,90,0	1/1:1,10:11:30.01:275,30,0	1/1:2,23:25:69.04:631,69,0	1/1:2,28:30:84.05:769,84,0	1/1:0,12:12:36.02:330,36,0	1/1:1,18:19:51.03:467,51,0	1/1:1,17:18:45.02:412,45,0	1/1:1,19:20:54.03:494,54,0	1/1:4,13:17:39.01:357,39,0	1/1:3,21:24:54.03:494,54,0	1/1:3,26:29:69.03:631,69,0	1/1:3,7:10:21.01:192,21,0	1/1:1,27:28:78.03:714,78,0	1/1:2,3:5:6:55,6,0	1/1:2,23:25:60.03:549,60,0	1/1:1,22:23:57.03:522,57,0	1/1:2,13:15:36.02:330,36,0	1/1:1,17:18:45.02:412,45,0	1/1:5,26:31:74.30:685,74,0	1/1:2,19:21:54.02:494,54,0	1/1:1,10:11:30.02:275,30,0
chr10	22567727	.	ATGT	A	2199.52	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.173;DP=443;FS=0.000;HRun=0;HaplotypeScore=64.1979;InbreedingCoeff=0.9832;MQ=103.52;MQ0=0;MQRankSum=-5.855;QD=39.28;ReadPosRankSum=-1.055;VQSLOD=3.8559;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:57.18:0,57,1225	0/0:13,0:13:39.13:0,39,880	0/0:27,0:27:69.24:0,69,1503	0/0:27,0:27:72.18:0,72,1460	0/0:8,0:8:21.07:0,21,458	0/0:20,0:20:54.19:0,54,1200	0/0:10,0:10:27.03:0,27,517	1/1:0,28:28:84.26:1344,84,0	0/0:14,0:14:42.13:0,42,904	1/1:0,13:13:39.13:649,39,0	1/1:2,13:15:21.07:349,21,0	0/0:13,0:13:36.08:0,36,767	0/0:22,0:22:66.23:0,66,1455	0/0:17,0:17:51.15:0,51,1052	0/0:18,0:18:54.19:0,54,1218	0/0:24,0:24:69.24:0,69,1561	0/0:11,0:11:27.09:0,27,602	0/0:9,0:9:21.03:0,21,428	0/0:9,0:9:27.09:0,27,590	0/0:13,0:13:33.11:0,33,745	0/0:9,0:9:27.09:0,27,610	0/0:13,0:13:39.13:0,39,848	0/0:17,0:17:48.16:0,48,1068	0/0:16,0:16:48.16:0,48,1086	0/0:17,0:17:51.18:0,51,1156	0/0:17,0:17:48.16:0,48,1070	0/0:20,0:20:60.21:0,60,1336	0/0:4,0:4:12.04:0,12,267
chr10	22568467	.	A	AT	12589.89	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=-15.766;DP=587;FS=12.555;HRun=3;HaplotypeScore=53.6689;InbreedingCoeff=0.9987;MQ=83.00;MQ0=0;MQRankSum=-5.078;QD=37.58;ReadPosRankSum=1.715;VQSLOD=4.2899;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,19:20:51.13:691,51,0	1/1:2,6:8:18.06:252,18,0	0/0:25,0:25:72.18:0,72,822	0/0:20,0:19:51.11:0,51,579	0/0:29,0:29:87.22:0,87,1008	0/0:23,0:23:69.20:0,69,816	0/0:23,0:23:60.16:0,60,697	1/1:0,42:42:99:1728,126,0	1/1:1,15:16:36.12:504,36,0	1/1:0,22:22:66.22:923,66,0	1/1:1,26:27:75.21:1028,75,0	0/0:11,0:11:33.09:0,33,385	0/0:24,0:24:69.20:0,69,816	0/0:16,0:16:48.15:0,48,576	1/1:2,22:24:63.21:882,63,0	1/1:0,18:17:42.14:588,42,0	1/1:1,16:17:45.15:629,45,0	1/1:0,12:12:33.11:462,33,0	1/1:3,16:19:48.16:672,48,0	1/1:3,34:37:99:1428,102,0	1/1:1,15:16:42.14:588,42,0	0/0:14,0:14:39.11:0,39,457	0/0:22,0:22:63.16:0,63,732	0/0:18,0:18:51.14:0,51,600	0/0:27,0:27:78.24:0,78,936	1/1:1,26:27:81.27:1123,81,0	1/1:0,20:20:48.16:672,48,0	1/1:0,10:10:30.10:420,30,0
chr10	22568565	.	T	TCACACA	2868.62	PASS	AB=0.961;AC=29;AF=0.604;AN=48;BaseQRankSum=-2.616;DP=500;FS=5.816;HRun=0;HaplotypeScore=130.2642;InbreedingCoeff=0.1042;MQ=63.12;MQ0=13;MQRankSum=-0.787;QD=9.05;ReadPosRankSum=-1.161;VQSLOD=2.2446;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:23:13.84:14,0,129	1/1:4,0:4:7.83:84,8,0	./.	./.	1/1:12,0:21:3.01:85,3,0	1/1:10,10:21:5.98:153,6,0	1/1:17,0:17:9:91,9,0	0/1:22,0:21:0:0,0,0	0/1:17,0:17:17.76:150,0,18	0/0:7,0:14:24.08:0,24,328	0/0:8,0:18:15.35:0,15,182	1/1:8,8:16:5.92:171,6,0	0/1:10,6:18:47.21:91,0,47	./.	0/0:30,0:30:21.28:0,21,181	0/1:23,0:23:16.90:446,0,17	1/1:14,0:14:12.02:157,12,0	0/1:14,0:11:19.81:140,0,20	0/1:9,0:9:29.35:43,0,29	0/1:18,0:16:61.41:94,0,61	0/1:18,0:16:30.95:31,0,64	./.	0/0:11,4:20:0.37:0,0,1	0/0:11,0:14:0.47:0,0,1	1/1:15,1:18:18.06:329,18,0	1/1:9,0:12:18.06:375,18,0	1/1:19,0:20:10.89:206,11,0	1/1:7,1:8:15.05:361,15,0
chr10	22568610	.	C	CACAT	5232.74	PASS	AB=0.832;AC=30;AF=0.536;AN=56;BaseQRankSum=-1.049;DP=597;FS=0.000;HRun=0;HaplotypeScore=121.9923;InbreedingCoeff=0.4331;MQ=67.66;MQ0=9;MQRankSum=-1.508;QD=13.11;ReadPosRankSum=0.025;VQSLOD=4.0348;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:25:19.28:149,0,19	1/1:1,8:11:14.84:254,15,0	0/0:26,0:20:35.77:0,36,420	0/0:21,0:13:4.54:0,5,124	0/0:24,0:24:8.78:0,9,213	0/0:29,0:29:8.88:0,9,361	0/1:11,0:11:42.75:43,0,57	1/1:28,0:27:66.70:551,67,0	1/1:8,3:12:25.29:428,25,0	0/1:22,0:22:11.62:252,0,12	1/1:24,0:24:27.11:316,27,0	0/0:15,0:15:17.52:0,18,142	0/1:24,0:24:19.24:19,0,323	0/0:19,0:18:23.37:0,23,195	0/1:3,0:27:2.75:89,0,3	1/1:26,1:28:36.12:523,36,0	1/1:2,16:18:9.03:250,9,0	1/1:5,2:19:10.55:240,11,0	1/1:4,0:12:25.85:244,26,0	0/1:5,15:20:6.22:333,0,6	0/1:6,20:26:1.88:188,0,2	0/0:16,0:16:18.35:0,18,138	0/0:27,0:28:32.64:0,33,262	0/0:20,0:20:29.41:0,29,225	0/1:32,0:31:99:159,0,320	1/1:20,0:20:53.39:492,53,0	1/1:20,0:20:50.80:488,51,0	1/1:14,0:14:9.98:216,10,0
chr10	22570623	.	A	ACTCTG	14228.50	PASS	AB=0.522;AC=31;AF=0.554;AN=56;BaseQRankSum=14.026;DP=460;FS=4.628;HRun=0;HaplotypeScore=104.7938;InbreedingCoeff=0.9072;MQ=54.59;MQ0=0;MQRankSum=-15.890;QD=69.07;ReadPosRankSum=1.469;VQSLOD=6.4256;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,11:14:30.10:994,30,0	1/1:3,3:4:9.03:298,9,0	0/0:15,0:13:36.12:0,36,760	0/0:13,0:13:31.65:0,32,663	0/0:16,0:16:48.15:0,48,1073	0/0:24,0:24:69.24:0,69,1567	0/0:40,0:40:99:0,114,2612	1/1:4,8:13:39.13:1108,39,0	1/1:1,13:11:30.10:991,30,0	1/1:1,19:21:54.19:1777,54,0	1/1:0,12:12:36.12:1192,36,0	0/0:20,0:20:60.21:0,60,1371	0/0:23,0:23:66.23:0,66,1519	0/0:20,0:20:60.18:0,60,1291	1/1:5,14:17:45.15:1492,45,0	1/1:4,16:12:33.11:1094,33,0	1/1:1,12:13:30.10:953,30,0	1/1:3,10:15:27.09:872,27,0	1/1:1,3:4:12.04:337,12,0	1/1:3,12:16:42.14:1293,42,0	0/1:1,9:9:4.95:381,0,5	0/0:14,0:14:42.14:0,42,979	0/0:24,0:24:66.21:0,66,1443	0/0:26,0:25:78.27:0,78,1778	0/0:19,0:19:57.15:0,57,1233	1/1:0,8:6:18.06:596,18,0	1/1:1,8:9:24.08:751,24,0	1/1:0,1:1:3.01:100,3,0
chr10	22571236	.	TTTA	T	4034.40	PASS	AB=1.000;AC=40;AF=0.714;AN=56;BaseQRankSum=5.079;DP=222;FS=7.394;HRun=0;HaplotypeScore=50.6053;InbreedingCoeff=0.3697;MQ=49.86;MQ0=3;MQRankSum=-3.693;QD=21.69;ReadPosRankSum=-0.053;VQSLOD=2.0991;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,4:10:21.02:289,21,0	1/1:6,2:8:21.07:299,21,0	0/0:3,0:3:6.02:0,6,74	0/0:3,0:1:3.01:0,3,37	0/0:11,0:11:21.06:0,21,252	0/1:13,0:13:48.08:48,0,82	1/1:1,0:1:2.60:10,3,0	1/1:28,0:24:36.81:340,37,0	1/1:4,0:4:12.04:166,12,0	1/1:5,0:5:9.39:64,9,0	1/1:6,1:7:10.83:67,11,0	0/1:9,0:9:23.79:26,0,24	0/1:6,0:6:2.64:3,0,131	0/1:5,0:5:5.87:6,0,63	1/1:0,4:4:12.04:192,12,0	1/1:2,0:2:6.02:84,6,0	1/1:15,4:19:41.93:565,42,0	1/1:14,3:17:43.02:588,43,0	1/1:11,1:11:18.06:258,18,0	1/1:3,1:4:6.02:90,6,0	1/1:2,0:2:4.56:46,5,0	0/0:1,0:1:3.01:0,3,37	0/1:3,0:3:1.11:1,0,66	0/1:3,0:3:26.42:26,0,29	0/0:18,0:18:4.56:0,5,355	1/1:6,2:7:24.08:348,24,0	1/1:10,2:12:27.09:389,27,0	1/1:3,1:3:9.03:131,9,0
chr10	22571239	.	A	AT	3578.19	PASS	AB=0.917;AC=35;AF=0.625;AN=56;BaseQRankSum=2.071;DP=217;FS=1.298;HRun=3;HaplotypeScore=46.1089;InbreedingCoeff=0.6877;MQ=49.77;MQ0=3;MQRankSum=-5.054;QD=23.85;ReadPosRankSum=-2.714;VQSLOD=2.4015;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,3:8:20.96:224,21,0	1/1:3,4:7:21.07:282,21,0	0/0:3,0:3:6.02:0,6,74	0/0:3,0:1:3.01:0,3,37	0/0:7,0:11:21.07:0,21,260	0/0:3,0:12:32.56:0,33,257	0/1:2,0:2:0.26:0,0,19	1/1:28,0:24:34.07:337,34,0	1/1:2,2:4:12.04:168,12,0	1/1:5,0:5:9.39:64,9,0	1/1:9,0:9:12.95:72,13,0	0/0:2,0:9:14.78:0,15,110	0/0:5,0:7:11.70:0,12,155	0/1:5,0:5:0.84:1,0,65	1/1:4,0:4:12.02:114,12,0	1/1:0,2:2:6.02:85,6,0	1/1:9,8:17:45.04:548,45,0	1/1:7,11:18:45.16:540,45,0	1/1:5,5:9:18.06:241,18,0	1/1:3,1:4:6.01:69,6,0	1/1:0,2:2:5.89:57,6,0	0/0:1,0:1:3.01:0,3,37	0/0:2,0:3:8.96:0,9,92	0/1:2,1:3:24.78:25,0,53	0/0:11,0:18:44.85:0,45,467	1/1:2,6:7:23.99:298,24,0	1/1:5,5:10:27.04:342,27,0	1/1:3,1:3:9.02:112,9,0
chr10	22571254	.	AT	A	556.79	PASS	AB=0.919;AC=21;AF=0.375;AN=56;BaseQRankSum=0.951;DP=191;FS=20.709;HRun=3;HaplotypeScore=53.5718;InbreedingCoeff=0.3140;MQ=50.65;MQ0=4;MQRankSum=-7.327;QD=6.55;ReadPosRankSum=2.448;VQSLOD=-0.6315;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:7,0:7:1.73:34,0,2	1/1:3,3:6:7.03:138,7,0	0/0:1,0:1:3.01:0,3,33	0/0:2,0:1:3.01:0,3,42	0/0:7,0:7:21.05:0,21,247	0/0:13,0:13:15.81:0,16,177	1/1:2,0:2:0.61:3,1,0	0/0:30,0:22:46.27:0,46,408	1/1:1,2:3:1.41:67,1,0	0/0:6,0:6:13.72:0,14,108	0/0:9,0:9:18.70:0,19,158	0/0:7,0:7:1.89:0,2,5	0/0:4,0:4:3.42:0,3,44	0/0:4,0:4:7.79:0,8,87	0/1:8,0:8:1.38:1,0,5	1/1:0,2:2:6.02:71,6,0	1/1:12,5:17:3.47:122,3,0	0/1:11,6:17:97.02:186,0,97	0/1:10,0:8:6.93:7,0,49	1/1:2,0:2:2.22:7,2,0	1/1:0,1:1:1.82:5,2,0	0/0:1,0:1:3.01:0,3,42	0/0:2,0:2:3.48:0,3,43	0/0:3,0:3:3.07:0,3,61	0/0:11,0:11:10.89:0,11,112	0/0:6,0:6:7.28:0,7,23	0/1:5,1:6:8.26:28,0,8	1/1:3,1:2:3.48:35,3,0
chr10	22571258	.	AT	A	3075.49	PASS	AB=0.689;AC=28;AF=0.500;AN=56;BaseQRankSum=1.894;DP=199;FS=1.519;HRun=3;HaplotypeScore=44.8828;InbreedingCoeff=0.3832;MQ=51.24;MQ0=4;MQRankSum=-5.529;QD=21.97;ReadPosRankSum=-0.883;VQSLOD=2.7982;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,8:8:18.05:216,18,0	1/1:3,3:6:18.05:199,18,0	0/0:3,0:3:9:0,9,83	0/0:2,0:1:3.01:0,3,42	0/0:7,0:7:15.05:0,15,195	0/0:14,0:14:18.81:0,19,199	1/1:2,0:2:0.60:3,1,0	0/1:10,21:23:99:454,0,181	1/1:2,2:4:9.02:101,9,0	0/1:1,5:6:26.89:133,0,27	0/1:4,4:8:43.71:164,0,44	0/0:7,0:7:1.89:0,2,5	0/0:4,0:4:3.40:0,3,44	0/0:4,0:4:7.79:0,8,87	1/1:0,8:8:18.06:223,18,0	1/1:3,0:3:9.01:91,9,0	1/1:5,11:16:41.37:478,41,0	0/1:10,7:17:28.85:399,0,29	0/1:3,5:6:15.42:167,0,15	1/1:1,2:3:9.02:99,9,0	0/1:1,0:1:0:0,0,0	0/0:1,0:1:3.01:0,3,42	0/0:2,0:2:3.48:0,3,43	0/0:4,0:4:0.54:0,1,36	0/0:11,0:11:13.91:0,14,155	1/1:0,6:6:18.06:222,18,0	1/1:1,6:7:18.05:217,18,0	1/1:5,1:4:9:88,9,0
chr10	22571701	.	TAC	T	2265.82	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=7.373;DP=357;FS=0.563;HRun=0;HaplotypeScore=90.4190;InbreedingCoeff=0.8459;MQ=71.95;MQ0=1;MQRankSum=-3.735;QD=17.70;ReadPosRankSum=3.013;VQSLOD=3.5198;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,5:6:3.01:39,3,0	1/1:1,1:3:3.01:39,3,0	0/0:29,0:20:27.26:0,27,330	0/0:29,0:15:5.83:0,6,276	0/0:12,0:12:21.06:0,21,333	0/0:13,0:13:36.12:0,36,606	0/0:2,0:2:6.02:0,6,103	0/0:33,0:33:81.15:0,81,1274	1/1:3,6:9:15.05:190,15,0	0/0:15,0:14:37.86:0,38,559	0/0:19,0:19:38.81:0,39,591	0/0:15,0:15:36.09:0,36,562	0/0:13,0:13:27.09:0,27,463	0/0:17,0:17:48.15:0,48,787	1/1:4,8:12:18.06:236,18,0	1/1:6,6:12:15.04:182,15,0	1/1:6,3:9:9.03:117,9,0	1/1:1,5:6:11.99:137,12,0	1/1:2,10:11:27.03:330,27,0	1/1:2,13:15:21.05:259,21,0	1/1:3,3:6:6.02:79,6,0	0/0:4,0:4:9.03:0,9,154	0/0:12,0:12:24.04:0,24,333	0/0:5,0:5:12.04:0,12,201	0/0:10,0:10:30.10:0,30,514	1/1:4,8:12:5.62:237,6,0	1/1:6,14:20:42.14:551,42,0	1/1:1,5:6:6.02:79,6,0
chr10	22571713	.	CTA	C	401.04	PASS	AB=0.938;AC=14;AF=0.280;AN=50;BaseQRankSum=4.221;DP=337;FS=0.883;HRun=0;HaplotypeScore=99.6763;InbreedingCoeff=0.2083;MQ=70.35;MQ0=4;MQRankSum=-5.813;QD=2.36;ReadPosRankSum=-0.155;VQSLOD=1.3200;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:2,0:2:3:0,3,28	0/0:28,0:15:8.62:0,9,41	0/1:46,0:16:0.13:0,0,8	0/0:12,0:12:11.96:0,12,93	0/0:15,0:15:33.09:0,33,367	./.	1/1:24,8:32:24.02:269,24,0	0/0:8,0:8:1.46:0,1,28	1/1:9,5:13:12.03:135,12,0	0/1:11,4:15:12.43:77,0,12	0/0:12,0:12:21.06:0,21,240	0/0:10,0:10:21.04:0,21,225	0/0:14,0:14:18.05:0,18,199	0/0:10,0:10:0.45:0,0,9	0/1:8,0:8:0.24:0,0,26	1/1:7,0:7:1.25:3,1,0	1/1:7,0:7:0.93:1,1,0	0/0:12,0:11:4.39:0,4,32	0/1:14,1:15:23.47:23,0,50	0/0:8,0:8:2.95:0,3,32	./.	0/0:8,0:8:9.03:0,9,100	0/0:3,0:3:3.01:0,3,34	0/0:10,0:10:12.03:0,12,132	0/1:8,1:9:16.77:17,0,110	0/1:17,0:16:1.68:2,0,50	0/0:5,0:5:6.01:0,6,61
chr10	22571729	.	A	ATG	458.71	PASS	AB=1.000;AC=12;AF=0.231;AN=52;BaseQRankSum=-1.749;DP=285;FS=12.478;HRun=0;HaplotypeScore=97.5005;InbreedingCoeff=-0.0010;MQ=70.28;MQ0=6;MQRankSum=-1.784;QD=3.99;ReadPosRankSum=-3.217;VQSLOD=0.5664;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	0/0:2,0:2:2.68:0,3,11	0/0:19,0:8:8.86:0,9,60	0/0:43,0:13:5.75:0,6,25	1/1:1,10:12:12.04:229,12,0	0/1:14,0:14:35.22:35,0,95	1/1:1,0:1:3:25,3,0	0/1:34,0:33:77.19:234,0,77	0/0:6,0:6:11.12:0,11,54	0/1:9,0:8:28.30:28,0,29	0/0:8,0:8:8.80:0,9,43	0/0:8,0:8:22.46:0,22,107	0/1:10,0:10:19.51:20,0,83	0/0:9,0:9:25.02:0,25,113	0/0:10,0:10:14.09:0,14,71	0/0:6,0:6:8.54:0,9,46	0/0:7,0:7:2.54:0,3,14	0/0:6,0:6:1.42:0,1,53	0/1:13,0:12:3.92:4,0,106	0/0:14,0:14:13.37:0,13,61	0/0:6,0:6:2.74:0,3,13	./.	0/1:5,0:5:3.85:4,0,18	0/0:2,0:2:5.64:0,6,26	0/1:8,0:8:2.92:3,0,59	0/1:9,0:9:10.59:11,0,47	0/0:16,0:15:18.41:0,18,156	0/0:5,0:4:5.60:0,6,27
chr10	22571740	.	CAT	C	1894.48	PASS	AB=0.833;AC=26;AF=0.542;AN=48;BaseQRankSum=4.524;DP=241;FS=0.738;HRun=0;HaplotypeScore=81.3574;InbreedingCoeff=0.6144;MQ=71.53;MQ0=5;MQRankSum=-6.856;QD=14.24;ReadPosRankSum=-1.616;VQSLOD=3.2942;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:13,0:6:0.88:0,1,2	0/0:35,0:13:2.92:0,3,8	0/0:12,0:12:21.07:0,21,338	0/0:15,0:15:39.13:0,39,634	0/0:2,0:2:6.02:0,6,94	1/1:14,15:29:61.73:724,62,0	1/1:1,3:4:3.01:39,3,0	1/1:2,5:6:15.04:170,15,0	1/1:1,4:5:6.02:70,6,0	0/0:7,0:7:12.04:0,12,202	0/1:9,0:9:13.53:14,0,275	0/0:7,0:7:18.02:0,18,272	1/1:1,10:11:3.01:39,3,0	1/1:2,4:6:6.02:77,6,0	1/1:3,5:8:5.77:72,6,0	1/1:1,4:5:9.02:116,9,0	1/1:3,7:9:18.06:226,18,0	1/1:2,10:12:6.02:75,6,0	0/1:3,3:6:0:0,0,0	./.	0/0:3,0:3:3:0,3,26	0/0:1,0:1:3.01:0,3,51	0/0:6,0:6:18.06:0,18,293	1/1:4,5:9:15.05:178,15,0	1/1:3,9:12:21.07:261,21,0	./.
chr10	22571775	.	GTAAA	G	7716.57	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=7.381;DP=326;FS=3.183;HRun=0;HaplotypeScore=78.2257;InbreedingCoeff=0.9339;MQ=85.27;MQ0=0;MQRankSum=-11.566;QD=41.71;ReadPosRankSum=-0.284;VQSLOD=5.0450;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,13:14:24.08:441,24,0	1/1:0,2:2:6.02:110,6,0	0/0:16,0:16:46.40:0,46,1038	0/0:11,0:11:15.06:0,15,578	0/0:19,0:19:57.20:0,57,1503	0/0:19,0:19:57.20:0,57,1506	0/0:7,0:7:21.07:0,21,537	1/1:9,27:35:81.26:1457,81,0	1/1:0,8:8:21.07:386,21,0	1/1:1,14:14:39.13:716,39,0	1/1:0,6:6:18.06:331,18,0	0/0:6,0:6:18.06:0,18,471	0/0:13,0:13:39.13:0,39,984	0/0:14,0:14:33.11:0,33,869	1/1:2,12:14:36.12:662,36,0	1/1:0,7:7:21.07:386,21,0	1/1:1,9:10:17.82:331,18,0	1/1:0,10:10:27.09:497,27,0	1/1:3,11:14:30.10:549,30,0	1/1:2,13:15:30.10:551,30,0	1/1:1,7:8:5.99:110,6,0	0/0:4,0:4:12.04:0,12,316	0/0:7,0:7:21.07:0,21,555	0/0:12,0:12:36.12:0,36,939	0/0:13,0:13:39.13:0,39,1027	1/1:0,9:9:27.09:496,27,0	1/1:1,14:14:36.12:640,36,0	1/1:1,1:2:3.01:55,3,0
chr10	22574091	.	TAGCC	T	27293.42	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-1.413;DP=607;FS=20.839;HRun=0;HaplotypeScore=113.5078;InbreedingCoeff=0.9873;MQ=71.36;MQ0=1;MQRankSum=-6.386;QD=46.58;ReadPosRankSum=4.401;VQSLOD=3.8217;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,20:21:54.18:989,54,0	1/1:0,9:9:21.07:374,21,0	0/0:10,0:10:22.26:0,22,432	0/0:11,0:11:18.03:0,18,402	1/1:3,24:27:63.22:1171,63,0	1/1:2,28:30:78.27:1436,78,0	1/1:0,17:17:48.16:895,48,0	1/1:7,26:33:78.27:1412,78,0	1/1:3,21:24:63.22:1158,63,0	1/1:1,25:26:75.26:1395,75,0	1/1:0,14:14:39.13:709,39,0	1/1:1,19:20:54.18:988,54,0	1/1:0,34:34:87.30:1587,87,0	1/1:1,18:19:42.14:784,42,0	1/1:1,29:30:75.26:1399,75,0	1/1:2,25:27:69.24:1288,69,0	1/1:1,9:10:21.07:392,21,0	1/1:0,9:9:21.07:392,21,0	1/1:0,21:21:63.18:1095,63,0	1/1:2,29:31:84.29:1493,84,0	1/1:1,21:22:54.18:989,54,0	1/1:1,27:28:72.25:1325,72,0	1/1:2,25:27:66.18:1157,66,0	1/1:2,19:21:33.11:616,33,0	1/1:0,29:29:84.29:1550,84,0	1/1:1,18:19:51.16:908,51,0	1/1:1,27:28:72.24:1289,72,0	1/1:0,9:9:27.09:503,27,0
chr10	22578252	.	CT	C	5341.19	PASS	AB=0.857;AC=21;AF=0.375;AN=56;BaseQRankSum=13.591;DP=679;FS=15.886;HRun=9;HaplotypeScore=66.6813;InbreedingCoeff=0.9207;MQ=66.89;MQ0=0;MQRankSum=0.777;QD=19.56;ReadPosRankSum=5.237;VQSLOD=3.8176;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:66.15:0,66,747	0/0:11,0:11:27.08:0,27,312	0/1:15,2:16:15.88:16,0,265	0/0:19,0:15:37.01:0,37,373	1/1:7,24:31:59.99:549,60,0	1/1:3,31:34:81.04:741,81,0	1/1:4,21:25:50.45:466,50,0	0/0:39,1:41:99:0,102,1126	0/0:21,0:21:54.15:0,54,614	0/0:32,0:32:73.44:0,73,818	0/0:29,0:29:84.25:0,84,969	1/1:1,22:23:60.03:549,60,0	1/1:0,22:22:57.03:522,57,0	1/1:5,25:30:57.01:522,57,0	0/0:27,0:27:75.21:0,75,855	0/0:12,1:13:11.65:0,12,388	0/0:21,0:21:51.14:0,51,578	0/0:11,0:11:33.10:0,33,381	0/0:30,0:26:63.18:0,63,719	0/0:23,0:23:57.17:0,57,658	0/0:18,0:18:45.12:0,45,509	1/1:2,21:23:60.03:549,60,0	1/1:4,17:21:51.02:467,51,0	1/1:2,15:17:42.02:384,42,0	1/1:5,24:29:63.03:577,63,0	0/0:35,0:36:96.11:0,96,1078	0/0:34,0:34:90.27:0,90,1038	0/0:15,0:15:42.12:0,42,485
chr10	22578471	.	GT	G	14100.74	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-0.677;DP=592;FS=4.147;HRun=7;HaplotypeScore=72.6769;InbreedingCoeff=0.9525;MQ=68.78;MQ0=1;MQRankSum=-4.976;QD=25.05;ReadPosRankSum=4.200;VQSLOD=5.4621;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,28:30:66.15:673,66,0	1/1:0,5:5:12.03:122,12,0	0/0:19,0:18:24.66:0,25,458	0/0:10,0:10:21.08:0,21,276	1/1:2,13:15:39.09:398,39,0	1/1:2,23:25:63.14:643,63,0	1/1:4,17:21:45.10:459,45,0	1/1:0,23:23:60.08:594,60,0	1/1:0,16:16:42.10:429,42,0	1/1:5,18:23:51.09:513,51,0	1/1:2,26:28:72.16:732,72,0	1/1:1,17:18:51.12:520,51,0	1/1:0,24:24:63.14:643,63,0	1/1:0,28:28:78.18:796,78,0	1/1:2,39:41:99:1041,102,0	1/1:2,19:21:54.12:551,54,0	1/1:4,18:22:30.37:469,30,0	1/1:2,18:20:42.04:417,42,0	1/1:2,22:24:60.12:605,60,0	1/1:1,19:20:54.12:550,54,0	1/1:1,20:21:51.11:520,51,0	1/1:2,15:17:39.08:394,39,0	1/1:0,20:20:57.13:581,57,0	1/1:0,19:19:48.11:490,48,0	1/1:4,21:25:58.01:583,58,0	1/1:2,22:24:66.15:673,66,0	1/1:5,23:28:60.13:612,60,0	1/1:2,3:5:9.02:92,9,0
chr10	22578696	.	G	GC	4073.25	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=-3.181;DP=517;FS=5.590;HRun=8;HaplotypeScore=100.9350;InbreedingCoeff=0.9021;MQ=67.25;MQ0=0;MQRankSum=-2.617;QD=17.33;ReadPosRankSum=-1.866;VQSLOD=2.9519;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,13:16:8.77:350,9,0	1/1:4,0:7:5.68:29,6,0	0/0:23,0:22:30.03:0,30,340	0/0:17,0:15:26.84:0,27,323	0/0:23,0:23:57.01:0,57,519	0/0:25,0:25:63.02:0,63,574	0/0:24,0:24:60.03:0,60,546	1/1:8,13:21:42.06:445,42,0	1/1:4,0:10:5.74:31,6,0	1/1:1,17:18:51.15:577,51,0	1/1:3,15:19:47.81:511,48,0	0/0:24,0:24:57.02:0,57,519	0/0:26,0:26:75.04:0,75,682	0/0:27,0:27:72.03:0,72,656	1/1:1,30:31:78.23:895,78,0	1/1:1,19:20:54.16:618,54,0	1/1:4,0:11:17.04:86,17,0	1/1:2,0:15:34.15:173,34,0	1/1:5,0:9:14.11:70,14,0	1/1:6,0:12:17.36:107,17,0	1/1:7,1:10:2.84:14,3,0	0/0:25,0:25:72.03:0,72,651	0/0:18,0:18:45.01:0,45,409	0/0:25,0:25:65.97:0,66,587	0/0:25,0:25:63.01:0,63,571	1/1:6,0:10:14.13:80,14,0	1/1:5,0:16:14.24:72,14,0	1/1:5,0:7:2.84:14,3,0
chr10	22579233	.	TTG	T	7266.80	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=-12.219;DP=985;FS=2.291;HRun=0;HaplotypeScore=182.2456;InbreedingCoeff=0.9131;MQ=67.31;MQ0=8;MQRankSum=2.661;QD=18.73;ReadPosRankSum=2.953;VQSLOD=5.2090;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:45:69.17:0,69,572	0/0:5,0:11:21.01:0,21,205	0/1:45,0:27:32.15:32,0,329	0/0:35,0:29:48.15:0,48,719	1/1:20,25:45:18.63:699,19,0	1/1:13,21:34:39.68:536,40,0	1/1:9,25:34:63.19:747,63,0	0/0:29,0:50:65.27:0,65,615	0/0:7,0:31:69.01:0,69,648	0/0:17,0:43:66.52:0,67,740	0/0:10,0:32:63.01:0,63,596	1/1:7,27:35:81.08:938,81,0	1/1:14,29:43:93.27:1088,93,0	1/1:16,26:43:70.20:860,70,0	0/0:16,0:51:96.02:0,96,924	0/0:11,0:52:99:0,123,1186	0/0:7,0:16:36.02:0,36,357	0/0:7,0:28:44.21:0,44,376	0/0:18,0:27:20.42:0,20,313	0/0:17,0:36:57.03:0,57,576	0/0:20,0:46:99:0,102,922	1/1:6,14:22:38.78:419,39,0	1/1:12,13:24:36.10:417,36,0	1/1:8,28:36:81.25:960,81,0	1/1:7,17:24:49.03:570,49,0	0/0:18,0:41:70.55:0,71,587	0/0:15,0:39:50.97:0,51,452	0/0:3,0:10:8.99:0,9,77
chr10	22579255	.	GTA	G	1763.05	PASS	AB=0.989;AC=11;AF=0.196;AN=56;BaseQRankSum=-1.053;DP=956;FS=21.403;HRun=0;HaplotypeScore=200.6000;InbreedingCoeff=-0.1167;MQ=57.70;MQ0=13;MQRankSum=3.453;QD=5.10;ReadPosRankSum=7.349;VQSLOD=1.1680;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:72.89:0,73,708	0/0:12,0:12:33:0,33,328	0/0:46,1:16:18.07:0,18,568	0/0:49,0:33:91.63:0,92,1125	0/1:37,0:37:99:184,0,204	0/1:28,0:28:73.23:115,0,73	0/1:35,0:35:99:142,0,161	0/0:39,0:39:8.73:0,9,861	0/0:32,0:32:81.06:0,81,851	0/0:33,0:33:25.14:0,25,842	0/0:26,0:26:69.14:0,69,736	0/1:39,0:39:99:260,0,110	1/1:36,3:39:0.60:381,1,0	0/1:37,0:37:60.14:238,0,60	0/0:50,0:50:99:0,120,1313	0/0:50,0:50:99:0,132,1504	0/0:27,0:27:52.64:0,53,667	0/0:26,0:25:56.25:0,56,557	0/0:23,0:20:8.34:0,8,433	0/0:30,0:30:69.08:0,69,770	0/0:54,0:51:99:0,126,1317	0/1:26,0:26:98.02:98,0,158	0/1:23,1:23:99:117,0,159	0/1:49,0:47:99:244,0,137	0/1:30,2:32:99:128,0,169	0/0:28,0:28:62.80:0,63,734	0/0:36,0:36:64.61:0,65,610	0/0:8,0:8:20.41:0,20,159
chr10	22580542	.	G	GA	986.94	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-7.534;DP=431;FS=10.636;HRun=4;HaplotypeScore=42.7099;InbreedingCoeff=0.9576;MQ=83.14;MQ0=0;MQRankSum=-0.507;QD=32.90;ReadPosRankSum=0.530;VQSLOD=3.2297;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:51.15:0,51,578	0/0:4,0:4:12.03:0,12,136	0/0:14,0:14:42.11:0,42,469	0/0:10,0:10:24.06:0,24,261	0/0:36,0:36:90.24:0,90,1011	0/0:21,0:21:60.17:0,60,681	0/0:8,0:8:24.05:0,24,262	0/0:27,0:27:69.18:0,69,768	0/0:19,0:19:45.13:0,45,510	1/1:1,15:16:45.15:616,45,0	1/1:2,12:14:36.12:493,36,0	0/0:14,0:14:36.10:0,36,409	0/0:21,0:21:54.15:0,54,613	0/0:17,0:17:45.13:0,45,511	0/0:18,0:18:48.12:0,48,535	0/0:18,0:18:51.15:0,51,578	0/0:16,0:16:45.13:0,45,510	0/0:7,0:7:18.05:0,18,204	0/0:10,0:10:27.08:0,27,306	0/0:16,0:16:48.14:0,48,545	0/0:8,0:8:18.05:0,18,204	0/0:19,0:19:48.14:0,48,545	0/0:15,0:15:42.12:0,42,476	0/0:9,0:9:24.07:0,24,272	0/0:18,0:18:51.15:0,51,579	0/0:18,0:18:51.15:0,51,579	0/0:16,0:16:48.14:0,48,545	0/0:5,0:5:12.03:0,12,136
chr10	22580621	.	ATG	A	255.73	PASS	AB=0.889;AC=6;AF=0.107;AN=56;BaseQRankSum=-2.035;DP=272;FS=7.326;HRun=0;HaplotypeScore=59.8290;InbreedingCoeff=-0.1453;MQ=69.61;MQ0=4;MQRankSum=-4.309;QD=3.60;ReadPosRankSum=-2.486;VQSLOD=0.2959;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:20.94:0,21,167	0/1:3,0:3:18.95:19,0,21	0/0:9,0:7:9.35:0,9,76	0/1:16,0:6:2.22:2,0,62	0/0:23,0:23:37.26:0,37,195	0/0:16,0:16:32.41:0,32,165	0/0:6,0:6:5.84:0,6,33	0/1:23,7:28:99:254,0,431	0/0:7,0:7:6:0,6,53	0/0:4,0:4:12.02:0,12,137	0/0:3,0:3:8.96:0,9,69	0/0:8,0:8:11.04:0,11,65	0/0:12,0:12:14.21:0,14,47	0/0:13,0:13:19.75:0,20,92	0/0:8,0:8:18:0,18,178	0/0:9,0:9:21:0,21,193	0/0:15,0:15:8.86:0,9,62	0/1:1,2:3:21.02:29,0,21	0/1:11,1:11:58.54:59,0,158	0/0:7,0:7:11.93:0,12,96	0/0:3,0:3:2.99:0,3,24	0/0:7,0:6:8.22:0,8,58	0/0:12,0:12:14.55:0,15,63	0/0:2,0:2:2.99:0,3,23	0/0:11,0:11:16.72:0,17,58	0/1:7,0:7:0.99:1,0,132	0/0:10,0:10:21.02:0,21,198	0/0:6,0:6:3.01:0,3,30
chr10	22580623	.	GTATA	G	2452.31	PASS	AC=20;AF=0.400;AN=50;BaseQRankSum=-7.218;DP=265;FS=2.618;HRun=0;HaplotypeScore=58.1808;InbreedingCoeff=0.6685;MQ=68.98;MQ0=5;MQRankSum=3.810;QD=20.44;ReadPosRankSum=3.929;VQSLOD=3.3253;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:10:3.01:0,3,53	0/0:3,0:3:3.37:0,3,17	0/0:7,0:6:4.37:0,4,53	0/0:16,0:6:3.69:0,4,14	1/1:4,18:22:30.10:522,30,0	1/1:4,12:16:27.09:473,27,0	1/1:1,5:6:6.02:105,6,0	0/0:28,0:28:7.53:0,8,463	0/0:1,0:7:3.01:0,3,53	0/0:3,0:3:3.01:0,3,55	./.	1/1:2,6:8:9.03:158,9,0	1/1:0,12:12:21.07:368,21,0	1/1:2,11:13:18.06:315,18,0	0/0:4,0:8:9.02:0,9,131	0/0:4,0:9:8.96:0,9,124	1/1:3,0:15:1.25:3,1,0	0/0:3,0:3:5.99:0,6,59	0/0:10,0:10:18.43:0,18,265	0/0:2,0:8:6.49:0,6,107	./.	1/1:1,4:4:3.01:53,3,0	1/1:1,11:12:15.05:263,15,0	./.	1/1:0,11:11:21.07:368,21,0	0/0:0,0:6:16.87:0,17,272	0/0:2,0:9:15.05:0,15,266	0/0:0,0:6:3.01:0,3,53
chr10	22587457	.	TAA	T	9993.22	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-13.952;DP=583;FS=1.712;HRun=11;HaplotypeScore=84.3190;InbreedingCoeff=0.9978;MQ=76.25;MQ0=3;MQRankSum=-1.066;QD=24.14;ReadPosRankSum=-0.044;VQSLOD=4.7426;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:33:57.89:0,58,213	1/1:1,9:10:27.07:287,27,0	0/0:11,0:10:24.08:0,24,346	0/0:15,0:15:27.08:0,27,363	1/1:7,18:25:48.07:511,48,0	1/1:1,19:20:51.12:543,51,0	1/1:1,23:25:63.11:726,63,0	1/1:10,21:31:60.11:638,60,0	1/1:3,17:20:42.10:447,42,0	1/1:2,18:20:51.12:543,51,0	1/1:2,16:18:42.08:447,42,0	1/1:3,21:24:54.13:575,54,0	1/1:3,25:28:72.17:766,72,0	1/1:5,16:21:42.09:447,42,0	0/0:7,0:32:55.37:0,55,200	0/0:2,0:13:27.63:0,28,97	1/1:1,15:19:32.51:367,33,0	1/1:2,9:10:21.05:224,21,0	1/1:2,10:12:30.05:312,30,0	1/1:7,22:28:54.10:575,54,0	1/1:0,17:17:45.11:479,45,0	1/1:2,23:25:60.12:639,60,0	1/1:3,21:23:48.08:511,48,0	1/1:3,18:21:51.12:543,51,0	1/1:1,13:14:39.09:415,39,0	0/0:7,0:28:55.40:0,55,206	0/0:2,0:26:52.40:0,52,180	0/0:0,0:9:22.46:0,22,77
chr10	22588132	.	CTTT	C	2526.12	PASS	AC=24;AF=0.462;AN=52;BaseQRankSum=-7.151;DP=189;FS=0.000;HRun=13;HaplotypeScore=39.2171;InbreedingCoeff=0.7947;MQ=65.41;MQ0=3;MQRankSum=1.725;QD=24.77;ReadPosRankSum=3.976;VQSLOD=1.6234;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,3:6:8.67:109,9,0	./.	0/0:8,0:3:3.01:0,3,57	0/0:4,0:4:2.52:0,3,34	0/0:2,0:8:22.19:0,22,198	0/0:1,0:3:8.99:0,9,103	0/0:1,0:4:5.98:0,6,46	0/0:0,0:8:11.47:0,11,33	1/1:1,6:7:11.96:127,12,0	0/0:5,0:15:16.32:0,16,52	0/0:1,0:10:11.16:0,11,32	0/0:0,0:4:8.97:0,9,68	0/0:0,0:1:2.99:0,3,23	0/0:0,0:5:11.95:0,12,92	1/1:0,5:5:12.04:146,12,0	1/1:1,4:4:9.03:109,9,0	1/1:0,14:15:34.49:435,34,0	1/1:2,8:10:24.05:292,24,0	1/1:1,10:11:30.05:337,30,0	1/1:2,6:7:9.01:109,9,0	1/1:0,7:7:15.05:182,15,0	./.	0/0:1,0:2:2.99:0,3,23	0/0:2,0:6:14.96:0,15,149	0/0:4,0:7:17.93:0,18,163	1/1:1,11:12:33.10:401,33,0	1/1:1,12:12:29.95:365,30,0	1/1:0,3:3:9.03:109,9,0
chr10	22588175	.	CG	C	755.87	PASS	AC=16;AF=0.333;AN=48;BaseQRankSum=-2.190;DP=110;FS=2.498;HRun=1;HaplotypeScore=26.6970;InbreedingCoeff=0.7107;MQ=47.28;MQ0=7;MQRankSum=-4.394;QD=26.06;ReadPosRankSum=1.169;VQSLOD=3.4908;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:2,0:1:3.01:0,3,48	./.	0/0:1,0:1:3.01:0,3,48	./.	1/1:0,8:7:15.05:209,15,0	1/1:0,1:1:3.01:36,3,0	1/1:0,5:5:9.03:119,9,0	0/0:9,0:6:18.03:0,18,260	0/0:3,0:3:6.02:0,6,96	0/0:3,0:2:6.02:0,6,96	0/0:6,0:6:15.04:0,15,217	1/1:0,2:2:6.02:84,6,0	1/1:0,1:1:3.01:42,3,0	1/1:0,5:5:12.04:158,12,0	0/0:5,0:5:15.05:0,15,239	0/0:4,0:3:9.03:0,9,144	0/0:7,0:7:18.06:0,18,286	0/0:7,0:6:15.05:0,15,220	0/0:7,0:6:18.06:0,18,288	0/0:4,0:3:6.02:0,6,96	0/0:4,0:4:9.03:0,9,144	./.	./.	1/1:1,1:2:6:65,6,0	1/1:0,5:5:15.05:209,15,0	0/0:8,0:8:24.08:0,24,383	0/0:8,0:7:21.07:0,21,335	0/0:3,0:2:6.02:0,6,96
chr10	22588196	.	G	GT	890.75	PASS	AC=36;AF=1.000;AN=36;DP=57;FS=0.000;HRun=2;HaplotypeScore=15.1361;InbreedingCoeff=-0.0349;MQ=45.49;MQ0=2;QD=18.56;VQSLOD=3.2295;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	./.	1/1:1,0:1:0.89:2,1,0	./.	./.	1/1:0,1:1:3.01:32,3,0	1/1:0,4:4:5.95:50,6,0	./.	1/1:1,1:2:3.01:41,3,0	1/1:1,2:2:6.02:85,6,0	1/1:1,2:3:3.01:31,3,0	1/1:0,2:2:6.01:61,6,0	1/1:0,2:2:5.97:52,6,0	1/1:0,5:5:12.03:124,12,0	1/1:0,1:1:3.01:30,3,0	1/1:1,0:1:3:25,3,0	1/1:1,2:3:5.93:41,6,0	1/1:1,4:4:11.97:137,12,0	./.	1/1:1,1:1:3:25,3,0	./.	./.	./.	./.	1/1:1,4:5:11.90:100,12,0	1/1:0,1:1:2.97:20,3,0	1/1:0,5:4:6.02:76,6,0	1/1:1,1:2:3.01:32,3,0
chr10	22589996	.	ATCTG	A	843.40	PASS	AC=8;AF=0.190;AN=42;BaseQRankSum=6.746;DP=473;FS=50.273;HRun=0;HaplotypeScore=50.4150;InbreedingCoeff=0.8125;MQ=32.46;MQ0=98;MQRankSum=-6.004;QD=19.61;ReadPosRankSum=-2.234;VQSLOD=1.2441;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:20:39.13:0,39,1010	1/1:3,5:7:18.06:323,18,0	0/0:21,0:1:3.01:0,3,78	./.	0/0:24,0:17:39.13:0,39,1011	0/0:32,0:24:69.24:0,69,1784	0/0:14,0:7:21.07:0,21,544	0/0:12,0:1:3.01:0,3,78	./.	0/0:41,0:25:75.26:0,75,1927	0/0:22,0:21:47.80:0,48,1244	0/0:16,0:14:42.14:0,42,1086	0/0:21,0:15:39.13:0,39,1008	0/0:24,0:17:42.14:0,42,1085	0/0:25,0:15:42.14:0,42,1086	0/0:22,0:12:36.12:0,36,932	1/1:4,0:1:3.01:38,3,0	./.	./.	1/1:2,17:17:30.10:538,30,0	./.	0/0:17,0:12:27.09:0,27,699	0/0:24,0:17:42.14:0,42,1088	0/0:17,0:12:27.09:0,27,700	0/0:25,0:19:42.14:0,42,1088	1/1:9,3:3:6.01:79,6,0	./.	./.
chr10	22590403	.	CAA	C	3084.65	PASS	AB=0.758;AC=26;AF=0.464;AN=56;BaseQRankSum=-11.164;DP=445;FS=1.514;HRun=13;HaplotypeScore=68.4918;InbreedingCoeff=0.7682;MQ=79.05;MQ0=3;MQRankSum=0.384;QD=14.97;ReadPosRankSum=2.409;VQSLOD=2.7441;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,7:8:11.96:166,12,0	1/1:2,5:7:9.01:86,9,0	0/0:17,0:17:34.32:0,34,295	0/0:19,0:14:5.15:0,5,62	0/0:4,0:24:38.85:0,39,336	0/0:4,0:16:30.06:0,30,306	0/1:4,1:11:14.07:14,0,100	0/0:7,0:24:40.90:0,41,165	1/1:2,9:11:24.03:233,24,0	0/0:4,0:10:17.04:0,17,90	0/0:7,1:27:54.54:0,55,255	0/0:4,0:14:3:0,3,29	0/0:4,0:17:8.29:0,8,76	0/0:3,0:10:9.01:0,9,86	1/1:5,13:19:32.96:366,33,0	1/1:2,13:14:27.04:262,27,0	0/1:4,7:12:7.65:125,0,8	1/1:4,8:12:14.82:195,15,0	1/1:7,14:22:41.66:380,42,0	1/1:5,26:34:53.26:538,53,0	1/1:2,3:5:9:85,9,0	0/0:2,0:14:29.97:0,30,278	0/0:5,0:13:21.90:0,22,202	0/0:3,0:7:12.01:0,12,112	0/0:6,0:23:45.09:0,45,462	1/1:7,12:19:32.91:363,33,0	1/1:8,17:25:39:376,39,0	1/1:0,4:5:5.95:108,6,0
chr10	22590415	.	AAC	A	501.68	PASS	AB=0.981;AC=15;AF=0.268;AN=56;BaseQRankSum=2.251;DP=425;FS=22.585;HRun=0;HaplotypeScore=74.2995;InbreedingCoeff=0.0391;MQ=75.92;MQ0=3;MQRankSum=1.855;QD=2.76;ReadPosRankSum=5.774;VQSLOD=-0.1612;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:10,0:10:20.19:20,0,30	0/1:7,1:8:23.57:43,0,24	0/0:19,0:14:7.55:0,8,275	0/0:19,0:14:14.84:0,15,100	0/0:25,0:25:26.86:0,27,261	0/0:15,0:15:38.43:0,38,402	0/0:7,0:7:7.13:0,7,125	0/0:25,0:25:67.59:0,68,491	0/1:10,0:10:4.15:30,0,4	0/0:12,0:12:35.49:0,35,290	0/0:29,0:29:70.27:0,70,472	0/0:10,0:10:3.01:0,3,34	0/0:16,0:16:11.28:0,11,107	0/0:8,0:8:12.01:0,12,119	0/1:15,1:16:9.52:69,0,10	1/1:14,0:13:17.94:51,18,0	0/1:11,0:10:13.96:14,0,35	0/1:11,0:11:16.70:45,0,17	0/1:18,0:18:50.81:51,0,79	0/1:35,0:34:35.64:114,0,36	0/1:5,0:5:6.32:6,0,37	0/0:15,0:15:29.97:0,30,307	0/0:15,0:14:21.85:0,22,221	0/0:7,0:7:9.03:0,9,101	0/0:21,0:21:48.07:0,48,548	1/1:13,1:14:12.17:115,12,0	0/1:24,1:25:66.57:83,0,67	0/1:5,0:5:4.55:23,0,5
chr10	22591493	.	GTA	G	271.63	PASS	AB=0.761;AC=3;AF=0.054;AN=56;BaseQRankSum=4.946;DP=598;FS=0.000;HRun=0;HaplotypeScore=120.8403;InbreedingCoeff=-0.0611;MQ=63.00;MQ0=8;MQRankSum=-5.206;QD=3.88;ReadPosRankSum=-3.210;VQSLOD=1.8084;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,1:25:45.15:0,45,868	0/0:10,0:10:27.09:0,27,514	0/0:42,0:30:52.54:0,53,1319	0/0:35,1:26:61.54:0,62,1010	0/0:17,5:18:33.09:0,33,579	0/0:21,4:24:13.48:0,13,703	0/0:16,7:20:28.04:0,28,512	0/1:26,10:35:99:255,0,1212	0/0:20,2:22:47.82:0,48,836	0/0:22,2:22:29.32:0,29,1131	0/0:15,1:15:39.13:0,39,753	0/1:7,7:14:91.71:92,0,100	0/1:16,4:20:24.71:25,0,98	0/0:12,2:14:9.36:0,9,165	0/0:18,3:21:33.08:0,33,569	0/0:19,1:20:30.42:0,30,494	0/0:12,3:14:23.97:0,24,384	0/0:9,0:9:21.53:0,22,356	0/0:20,0:19:54.15:0,54,883	0/0:22,2:24:48.16:0,48,908	0/0:28,8:34:41.79:0,42,730	0/0:17,5:20:30.10:0,30,560	0/0:15,1:16:24.08:0,24,461	0/0:15,1:15:15.51:0,16,256	0/0:11,3:13:30.10:0,30,579	0/0:24,1:25:44.43:0,44,1186	0/0:24,0:24:18.06:0,18,322	0/0:7,0:7:18.06:0,18,323
chr10	22591529	.	C	CTG	2323.69	PASS	AB=1.000;AC=50;AF=0.893;AN=56;BaseQRankSum=5.299;DP=585;FS=14.719;HRun=0;HaplotypeScore=125.5162;InbreedingCoeff=0.2999;MQ=36.26;MQ0=47;MQRankSum=2.732;QD=4.13;ReadPosRankSum=1.739;VQSLOD=2.1758;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:31,0:24:14.93:116,15,0	1/1:6,0:5:11.92:90,12,0	0/0:8,0:6:13.39:0,13,135	0/0:15,0:6:17.88:0,18,154	1/1:30,0:22:8.97:76,9,0	1/1:18,0:16:12.22:111,12,0	1/1:25,0:16:5.92:41,6,0	0/1:50,0:48:99:141,0,280	1/1:21,0:21:27.20:191,27,0	0/1:22,0:19:49.90:179,0,50	1/1:11,0:10:5.99:50,6,0	1/1:21,0:21:14.53:87,15,0	1/1:7,17:24:12.19:158,12,0	1/1:7,10:17:9:76,9,0	1/1:24,0:24:3.82:108,4,0	1/1:21,0:18:12.37:93,12,0	1/1:14,0:12:9.37:83,9,0	1/1:10,0:9:10.57:92,11,0	1/1:15,0:12:14.73:100,15,0	1/1:21,0:20:8.99:74,9,0	1/1:27,0:23:9.43:70,9,0	1/1:27,1:23:6.01:76,6,0	1/1:10,14:21:3.01:51,3,0	1/1:6,13:18:0.02:52,0,0	1/1:18,0:12:6.53:54,7,0	1/1:24,0:22:9.22:204,9,0	1/1:2,29:29:5.88:47,6,0	1/1:8,0:5:5.95:42,6,0
chr10	22591531	.	GTCTCTCTCTCTCTC	G	269.36	PASS	AB=0.948;AC=8;AF=0.182;AN=44;BaseQRankSum=0.189;DP=561;FS=26.162;HRun=0;HaplotypeScore=169.9706;InbreedingCoeff=0.2852;MQ=35.08;MQ0=48;MQRankSum=-1.280;QD=2.30;ReadPosRankSum=0.635;VQSLOD=1.2392;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:20,10:23:2.25:88,2,0	./.	./.	./.	0/0:28,0:20:6.02:0,6,197	0/0:17,0:15:3.85:0,4,23	0/0:26,0:17:2.92:0,3,17	0/0:46,0:45:7.36:0,7,69	0/1:20,0:21:12:98,0,12	0/0:22,0:19:6.45:0,6,80	./.	0/0:21,0:21:17.03:0,17,273	0/0:24,0:24:15.31:0,15,282	0/0:18,0:17:9.50:0,9,221	0/0:22,0:22:5.04:0,5,86	0/0:20,0:17:2.49:0,2,6	0/0:14,0:12:0:0,0,0	0/0:10,0:9:3.27:0,3,14	0/1:15,0:13:31.23:56,0,31	0/0:20,0:19:0.47:0,0,1	./.	0/0:27,0:21:6.28:0,6,186	0/0:22,0:19:3.48:0,3,65	0/0:19,0:18:9.42:0,9,172	0/0:18,0:11:4.34:0,4,25	1/1:20,0:19:13.78:131,14,0	1/1:28,0:27:2.34:11,2,0	./.
chr10	22592287	.	G	GTCTC	2185.75	PASS	AB=1.000;AC=42;AF=0.750;AN=56;BaseQRankSum=-0.009;DP=680;FS=0.000;HRun=0;HaplotypeScore=250.5372;InbreedingCoeff=-0.0035;MQ=70.88;MQ0=23;MQRankSum=-2.783;QD=3.59;ReadPosRankSum=0.582;VQSLOD=1.8912;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:12,0:13:3.30:26,3,0	0/1:13,0:13:15.43:64,0,15	0/0:60,0:23:2.54:0,3,46	0/1:81,0:40:9.32:21,0,9	1/1:32,0:31:8.37:54,8,0	1/1:30,0:30:18.54:177,19,0	0/1:20,0:20:0.28:1,0,0	1/1:26,0:26:13.67:105,14,0	0/1:20,0:20:39.15:139,0,39	0/1:20,0:20:15.26:41,0,15	0/1:16,0:16:8.77:9,0,69	1/1:23,0:23:24.63:199,25,0	1/1:32,0:32:29.68:254,30,0	1/1:22,0:22:5.93:59,6,0	1/1:18,3:21:22.78:286,23,0	1/1:17,3:20:7.73:238,8,0	0/0:11,0:11:3.59:0,4,10	0/1:7,0:7:1.26:87,0,1	1/1:14,0:14:2.75:120,3,0	1/1:17,0:18:2.81:25,3,0	1/1:12,0:12:6.46:70,6,0	1/1:18,0:17:0.47:2,0,0	1/1:25,0:25:5.69:46,6,0	1/1:15,0:15:3.01:32,3,0	1/1:40,0:40:16.26:168,16,0	0/1:24,0:24:73.89:74,0,88	0/1:28,0:28:28.35:28,0,127	0/1:15,0:13:2.19:2,0,80
chr10	22592302	.	T	TCAGAG	1354.36	PASS	AB=0.854;AC=7;AF=0.125;AN=56;BaseQRankSum=0.422;DP=706;FS=9.017;HRun=0;HaplotypeScore=236.0109;InbreedingCoeff=-0.1473;MQ=58.92;MQ0=28;MQRankSum=-3.766;QD=6.42;ReadPosRankSum=1.352;VQSLOD=1.4237;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:15:15.52:0,16,296	0/0:13,0:13:36.12:0,36,690	0/1:49,0:14:9.77:10,0,415	0/0:69,0:31:22.02:0,22,709	0/0:26,9:34:18.13:0,18,379	0/1:24,8:32:99:237,0,141	0/1:17,5:21:55.82:124,0,56	0/0:29,0:29:79.61:0,80,1600	0/0:17,0:16:42.14:0,42,820	0/0:19,0:19:55.43:0,55,1109	0/0:22,0:22:32.96:0,33,690	0/1:20,2:21:99:146,0,183	0/1:22,11:34:99:768,0,412	0/0:20,6:25:8.13:0,8,188	0/0:22,0:21:44.40:0,44,874	0/0:19,0:19:39.10:0,39,766	0/0:12,0:12:11.53:0,12,201	0/0:9,0:8:21.07:0,21,402	0/0:18,0:18:51.23:0,51,978	0/0:27,0:27:53.97:0,54,1062	0/0:13,0:13:20.96:0,21,429	0/0:18,3:20:22.79:0,23,413	0/0:25,5:30:18.53:0,19,361	0/1:16,2:18:37.07:37,0,266	0/1:26,8:34:99:162,0,301	0/0:29,0:28:80.88:0,81,1647	0/0:33,0:31:54.18:0,54,1128	0/0:15,0:13:39.13:0,39,855
chr10	22592312	.	T	TCGAGAG	812.65	PASS	AB=0.840;AC=5;AF=0.089;AN=56;BaseQRankSum=3.680;DP=659;FS=4.814;HRun=0;HaplotypeScore=244.1520;InbreedingCoeff=-0.1051;MQ=50.43;MQ0=26;MQRankSum=-3.457;QD=4.81;ReadPosRankSum=-1.833;VQSLOD=2.2462;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:14:15.95:0,16,225	0/0:14,0:14:39.13:0,39,724	0/0:31,0:5:11.07:0,11,219	0/1:48,0:18:16.34:16,0,340	0/0:26,8:33:20.51:0,21,433	0/1:28,5:33:99:171,0,286	0/1:15,5:19:58.65:59,0,70	0/0:28,0:29:69.69:0,70,1190	0/0:18,0:17:42.14:0,42,824	0/0:22,0:22:60.20:0,60,1111	0/0:24,0:23:26.88:0,27,485	0/0:20,1:21:19.86:0,20,325	0/1:23,10:33:99:551,0,497	0/0:20,6:25:12.37:0,12,264	0/0:20,0:19:36.12:0,36,705	0/0:19,0:19:30.09:0,30,613	0/0:12,0:12:9.03:0,9,214	0/0:10,0:9:24.08:0,24,463	0/0:15,0:14:40.69:0,41,816	0/0:26,0:26:44.57:0,45,807	0/0:15,0:15:18.06:0,18,346	0/0:19,3:21:30.99:0,31,737	0/0:24,5:29:21.07:0,21,499	0/0:15,2:17:15.51:0,16,271	0/1:25,8:33:99:133,0,339	0/0:26,0:25:72.72:0,73,1557	0/0:35,0:33:48.16:0,48,1019	0/0:9,0:7:21.07:0,21,484
chr10	22592318	.	C	CCT	3948.10	PASS	AB=0.996;AC=40;AF=0.714;AN=56;BaseQRankSum=4.431;DP=615;FS=9.927;HRun=0;HaplotypeScore=196.9479;InbreedingCoeff=0.1961;MQ=48.58;MQ0=19;MQRankSum=-2.063;QD=7.46;ReadPosRankSum=1.988;VQSLOD=2.6017;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:15,1:15:6.89:109,7,0	1/1:14,0:14:30.56:262,31,0	0/0:28,0:6:5.76:0,6,31	0/0:36,0:14:11.21:0,11,115	0/1:28,0:29:16.20:34,0,16	0/1:26,0:27:13.69:15,0,14	0/1:18,0:18:2.62:3,0,7	1/1:28,0:28:9.35:246,9,0	1/1:18,0:18:24.81:164,25,0	1/1:24,0:24:30.67:383,31,0	0/1:27,0:26:7.04:82,0,7	0/1:20,0:20:9.42:12,0,9	0/1:29,0:29:12.08:60,0,12	0/1:22,0:23:1.16:1,0,23	1/1:15,2:19:17.07:246,17,0	1/1:6,12:19:4.34:115,4,0	1/1:11,1:12:5.50:40,6,0	1/1:10,0:9:19.59:155,20,0	1/1:19,0:17:24.06:293,24,0	1/1:22,0:22:33.01:446,33,0	1/1:13,1:14:9.19:113,9,0	0/0:20,0:20:8.78:0,9,58	0/1:28,0:28:9.38:9,0,32	0/1:16,0:16:10.57:25,0,11	0/1:28,0:30:0.15:17,0,0	1/1:9,15:23:50.46:540,50,0	1/1:7,25:31:30.02:450,30,0	1/1:4,2:6:13.83:130,14,0
chr10	22592326	.	TCACA	T	3042.05	PASS	AB=1.000;AC=28;AF=0.500;AN=56;BaseQRankSum=-1.185;DP=644;FS=4.354;HRun=0;HaplotypeScore=214.8273;InbreedingCoeff=0.3336;MQ=46.42;MQ0=18;MQRankSum=-0.517;QD=8.64;ReadPosRankSum=-2.960;VQSLOD=2.6415;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:14:10.29:82,10,0	0/1:14,0:14:9.02:243,0,9	0/0:38,0:8:9.07:0,9,315	0/0:36,0:11:24.04:0,24,501	0/0:30,0:30:35.94:0,36,514	0/0:27,0:27:17.47:0,17,244	0/1:21,0:20:51.95:52,0,117	1/1:12,18:30:53:612,53,0	0/1:19,0:19:43.04:157,0,43	1/1:22,0:22:31.50:389,31,0	1/1:9,17:25:2.43:77,2,0	0/0:21,0:20:14.53:0,15,209	0/0:30,0:30:30.08:0,30,413	0/0:24,0:23:17.01:0,17,208	1/1:19,0:18:9.01:155,9,0	1/1:20,0:20:6.71:128,7,0	1/1:11,0:11:2.90:16,3,0	0/1:12,0:11:13.22:102,0,13	1/1:20,0:18:23.68:278,24,0	1/1:30,0:30:4.53:435,5,0	1/1:15,0:15:14.07:187,14,0	0/0:24,0:24:12.34:0,12,579	0/0:28,0:28:38.94:0,39,571	0/1:16,0:16:22.42:22,0,104	0/0:34,0:34:31.75:0,32,524	0/1:23,0:22:17.01:180,0,17	0/1:34,0:32:45.75:111,0,46	0/1:6,0:6:8.70:9,0,50
chr10	22592795	.	C	CAAAAA	12697.95	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-2.750;DP=489;FS=5.128;HRun=11;HaplotypeScore=105.3376;InbreedingCoeff=0.6881;MQ=55.99;MQ0=0;MQRankSum=-3.178;QD=27.60;ReadPosRankSum=-1.390;VQSLOD=3.1378;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,0:25:44.75:491,45,0	1/1:4,0:7:6.02:86,6,0	0/0:17,0:14:14.87:0,15,182	0/0:12,0:7:7.71:0,8,77	1/1:18,1:26:34.27:684,34,0	1/1:13,10:26:33.11:789,33,0	1/1:6,1:9:18.04:425,18,0	1/1:22,0:33:43.37:658,43,0	1/1:3,6:10:12.04:276,12,0	1/1:12,1:17:31.32:500,31,0	1/1:16,0:28:44.51:800,45,0	1/1:16,0:16:24.04:457,24,0	1/1:21,0:21:36.12:874,36,0	1/1:8,5:14:24.08:622,24,0	1/1:8,0:18:27.09:488,27,0	1/1:9,0:14:18.06:333,18,0	1/1:6,0:10:1.40:290,1,0	1/1:1,0:12:23.44:365,23,0	1/1:14,0:21:36.11:657,36,0	1/1:7,0:18:33.11:567,33,0	1/1:1,0:5:6.02:100,6,0	1/1:11,4:16:18.06:390,18,0	1/1:10,8:20:23.29:571,23,0	1/1:3,2:5:4.57:86,5,0	1/1:11,7:19:15.05:397,15,0	1/1:12,0:19:41.46:710,41,0	1/1:20,0:31:39.13:805,39,0	1/1:4,0:13:15.05:275,15,0
chr10	22593178	.	AAG	A	13444.59	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-2.694;DP=536;FS=5.624;HRun=0;HaplotypeScore=88.7499;InbreedingCoeff=0.8487;MQ=53.63;MQ0=4;MQRankSum=0.078;QD=26.41;ReadPosRankSum=3.944;VQSLOD=5.4567;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,23:25:45.08:614,45,0	1/1:0,10:10:24.08:341,24,0	0/0:15,0:11:20.04:0,20,257	0/0:12,0:6:14.38:0,14,255	1/1:2,26:27:57.07:743,57,0	1/1:3,32:35:50.68:647,51,0	1/1:2,10:10:21.03:273,21,0	1/1:4,30:30:43.26:850,43,0	1/1:0,12:12:24.04:318,24,0	1/1:2,26:27:77.79:1036,78,0	1/1:0,23:23:60.06:782,60,0	1/1:2,15:15:27.09:375,27,0	1/1:0,15:14:33.08:447,33,0	1/1:1,16:16:30.10:425,30,0	1/1:4,13:17:29.29:358,29,0	1/1:1,11:12:24.05:319,24,0	1/1:4,14:16:42.12:557,42,0	1/1:6,8:13:27.47:289,27,0	1/1:2,22:23:65.68:805,66,0	1/1:2,29:31:72.14:976,72,0	1/1:0,4:4:5.98:62,6,0	1/1:0,15:15:29.93:335,30,0	1/1:1,25:26:42.09:560,42,0	1/1:2,17:19:30.10:426,30,0	1/1:2,14:16:33.50:443,34,0	1/1:4,17:20:16.29:527,16,0	1/1:1,33:33:63.21:896,63,0	1/1:0,1:1:3.01:43,3,0
chr10	22593179	.	AG	A	6388.82	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-1.005;DP=524;FS=3.664;HRun=1;HaplotypeScore=105.6374;InbreedingCoeff=0.8155;MQ=53.82;MQ0=5;MQRankSum=-0.171;QD=12.88;ReadPosRankSum=4.076;VQSLOD=4.1198;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:24:43.93:263,44,0	1/1:10,0:10:23.54:144,24,0	0/0:16,0:11:23.09:0,23,222	0/0:12,0:6:6.76:0,7,200	1/1:26,2:27:55.98:349,56,0	1/1:32,1:32:50.14:334,50,0	1/1:11,0:9:20.60:126,21,0	1/1:34,0:30:54.49:444,54,0	1/1:12,0:12:23.56:146,24,0	1/1:26,1:26:76.64:501,77,0	1/1:23,0:23:58.89:364,59,0	1/1:15,1:14:26.50:164,27,0	1/1:15,0:14:32.40:201,32,0	1/1:16,0:15:29.42:179,29,0	1/1:16,1:17:26.60:180,27,0	1/1:12,0:12:23.47:141,23,0	1/1:17,0:15:41.20:262,41,0	1/1:13,1:13:30.13:223,30,0	1/1:23,1:22:65.01:443,65,0	1/1:31,0:31:70.64:434,71,0	1/1:4,0:4:5.91:38,6,0	1/1:15,0:15:29.52:187,30,0	1/1:25,0:25:40.81:240,41,0	1/1:18,0:18:29.42:180,29,0	1/1:16,0:16:34.04:200,34,0	1/1:19,0:18:28.41:249,28,0	1/1:33,0:32:61.78:379,62,0	1/1:1,0:1:2.94:18,3,0
chr10	22595907	.	TA	T	4981.85	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=3.208;DP=395;FS=2.885;HRun=8;HaplotypeScore=44.5707;InbreedingCoeff=0.9501;MQ=64.44;MQ0=1;MQRankSum=-0.853;QD=24.79;ReadPosRankSum=3.089;VQSLOD=5.4262;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,23:26:63.10:608,63,0	1/1:1,9:10:24.04:232,24,0	0/0:13,0:8:13.28:0,13,143	0/0:2,0:2:6.02:0,6,73	0/0:27,0:27:78.23:0,78,929	0/0:18,0:18:51.16:0,51,616	0/0:3,0:3:9.03:0,9,109	0/0:5,0:28:64.66:0,65,336	1/1:2,16:18:48.08:463,48,0	0/0:0,0:16:38.27:0,38,212	0/0:2,0:10:25.33:0,25,131	0/0:13,0:13:36.11:0,36,434	0/0:14,0:14:39.12:0,39,471	0/0:13,0:13:39.12:0,39,471	1/1:1,10:11:24.04:232,24,0	1/1:1,8:9:21.03:203,21,0	1/1:0,10:10:30.05:290,30,0	1/1:0,8:8:24.04:232,24,0	1/1:3,10:13:30.03:290,30,0	1/1:0,33:33:93.14:898,93,0	1/1:1,4:5:12.02:116,12,0	0/0:4,0:4:9.03:0,9,109	0/0:4,0:4:9.03:0,9,109	0/0:5,0:5:15.03:0,15,170	0/0:24,0:24:66.20:0,66,797	1/1:1,21:22:63.10:608,63,0	1/1:1,22:23:60.10:579,60,0	1/1:1,12:13:23.87:232,24,0
chr10	22596675	.	C	CATACTACAAAAT	24417.60	PASS	AB=1.000;AC=42;AF=0.778;AN=54;BaseQRankSum=0.963;DP=680;FS=7.968;HRun=0;HaplotypeScore=208.3046;InbreedingCoeff=0.7323;MQ=55.24;MQ0=6;MQRankSum=-9.556;QD=49.33;ReadPosRankSum=0.109;VQSLOD=3.3672;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:21.07:0,21,532	1/1:2,6:12:6.02:225,6,0	0/0:39,0:19:54.15:0,54,1477	0/0:31,0:21:14.35:0,14,1438	1/1:11,6:23:13.94:280,14,0	1/1:2,11:17:27.09:1644,27,0	1/1:26,0:27:51.51:1813,52,0	0/0:27,0:26:44.05:0,44,1652	1/1:4,14:23:18.06:579,18,0	0/0:29,0:29:48.14:0,48,1426	./.	1/1:11,20:35:43.20:1721,43,0	1/1:6,13:24:33.11:1341,33,0	1/1:13,14:32:39.34:926,39,0	1/1:34,0:39:51.22:1504,51,0	1/1:16,0:20:60.21:1948,60,0	0/1:22,0:21:37.38:1494,0,37	0/1:16,0:16:12.57:912,0,13	1/1:7,7:20:54.16:1839,54,0	1/1:8,12:23:17.11:922,17,0	1/1:18,0:17:26.35:784,26,0	1/1:5,8:16:11.29:211,11,0	1/1:4,7:15:5.85:113,6,0	1/1:8,11:26:21.07:559,21,0	1/1:8,9:21:30.01:1196,30,0	1/1:34,0:34:79.67:2875,80,0	1/1:16,0:19:30.02:1012,30,0	1/1:10,0:11:18.05:521,18,0
chr10	22596677	.	CACACACACAT	C	1490.41	PASS	AB=1.000;AC=20;AF=0.370;AN=54;BaseQRankSum=-9.779;DP=661;FS=0.000;HRun=0;HaplotypeScore=228.2161;InbreedingCoeff=-0.0844;MQ=51.96;MQ0=6;MQRankSum=5.579;QD=3.74;ReadPosRankSum=-7.459;VQSLOD=-0.4363;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:12.04:0,12,259	0/1:9,0:9:42.92:43,0,88	0/0:38,0:18:19.04:0,19,236	0/1:31,0:20:25.43:25,0,156	0/1:21,0:22:5.70:50,0,6	0/0:14,0:15:20.34:0,20,589	0/1:30,0:31:60.12:60,0,64	1/1:15,12:26:59.03:461,59,0	0/1:19,0:20:26.22:26,0,90	1/1:1,27:28:64.31:649,64,0	./.	0/1:32,0:33:11.01:11,0,542	0/1:21,0:22:50.62:51,0,380	0/1:31,0:32:60.58:61,0,258	0/0:37,0:42:21.88:0,22,553	0/0:21,0:25:7.97:0,8,384	0/1:22,0:21:49.86:50,0,54	0/1:16,0:16:37.99:38,0,200	0/0:16,0:17:18.45:0,18,375	0/0:19,0:21:11.87:0,12,215	0/0:17,0:16:0:0,0,0	0/1:14,0:14:4.82:45,0,5	1/1:13,0:13:4.23:51,4,0	0/1:19,0:19:9.45:9,0,78	0/0:18,0:18:10.80:0,11,214	0/1:35,0:35:21.94:22,0,699	0/1:20,0:23:0.50:0,0,338	0/0:9,0:10:17.92:0,18,269
chr10	22596679	.	C	CTACAAAAT	15982.80	PASS	AB=0.873;AC=29;AF=0.537;AN=54;BaseQRankSum=4.321;DP=661;FS=15.730;HRun=0;HaplotypeScore=208.4552;InbreedingCoeff=-0.1269;MQ=49.71;MQ0=7;MQRankSum=-6.859;QD=33.44;ReadPosRankSum=5.165;VQSLOD=3.3155;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:21.06:0,21,464	0/1:10,0:10:16.88:100,0,17	0/0:36,0:16:48.05:0,48,1094	0/0:30,0:19:30.27:0,30,1103	0/1:24,0:24:55.84:199,0,56	1/1:16,0:16:27.09:974,27,0	0/1:13,0:29:47.22:1162,0,47	0/0:25,0:24:54.15:0,54,1438	0/1:20,0:20:13.73:294,0,14	0/0:28,0:28:50.87:0,51,1203	./.	0/1:33,0:33:26.39:954,0,26	0/1:21,0:21:37.94:650,0,38	0/1:30,0:32:99:394,0,113	1/1:21,16:44:37.85:1238,38,0	1/1:14,1:26:73.28:1795,73,0	0/1:13,0:21:99:854,0,107	0/1:10,0:17:99:688,0,113	1/1:16,0:16:44.74:1258,45,0	0/1:19,0:20:53.21:595,0,53	1/1:9,0:15:16.36:383,16,0	0/1:15,0:15:45.06:145,0,45	1/1:15,0:15:7.10:141,7,0	0/1:20,0:20:41.89:231,0,42	0/1:19,0:20:77.60:643,0,78	0/1:7,18:31:99:2068,0,126	1/1:7,8:17:22.50:821,22,0	0/1:5,2:11:53.88:395,0,54
chr10	22596685	.	CAT	C	2944.99	PASS	AB=1.000;AC=43;AF=0.796;AN=54;BaseQRankSum=-7.537;DP=671;FS=7.590;HRun=0;HaplotypeScore=191.1214;InbreedingCoeff=-0.0108;MQ=44.66;MQ0=8;MQRankSum=3.577;QD=4.80;ReadPosRankSum=-4.011;VQSLOD=1.6642;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:1,51:52:11.95:120,12,0	1/1:9,0:9:3.12:44,3,0	0/0:31,0:13:3.35:0,3,151	0/1:27,0:15:24.47:24,0,104	1/1:26,0:26:15.99:148,16,0	0/0:15,0:15:4.71:0,5,20	0/1:29,0:29:57.97:93,0,58	1/1:23,0:22:45.15:424,45,0	1/1:20,0:20:5.42:61,5,0	1/1:28,0:28:67.08:501,67,0	./.	1/1:34,0:33:3.26:95,3,0	1/1:24,0:24:6.64:114,7,0	1/1:35,0:35:12.97:138,13,0	1/1:42,0:41:23.45:143,23,0	1/1:24,0:24:1.45:53,1,0	0/1:21,0:21:36.18:97,0,36	0/1:20,0:19:49.86:50,0,105	1/1:18,0:18:8.30:155,8,0	1/1:21,0:21:3.08:31,3,0	1/1:22,0:20:5.72:39,6,0	0/1:16,0:16:0.93:82,0,1	1/1:17,0:17:20.63:160,21,0	1/1:22,0:22:4.20:27,4,0	1/1:20,0:20:8.60:99,9,0	0/1:30,0:30:99:126,0,171	1/1:21,0:21:27.78:168,28,0	0/1:12,0:12:28.75:92,0,29
chr10	22596910	.	CT	C	22532.46	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=0.931;DP=726;FS=4.280;HRun=3;HaplotypeScore=82.5223;InbreedingCoeff=0.9902;MQ=86.91;MQ0=0;MQRankSum=-11.658;QD=33.43;ReadPosRankSum=7.717;VQSLOD=4.3515;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,47:50:99:1586,129,0	1/1:0,5:5:15.05:186,15,0	0/0:23,0:23:69.19:0,69,910	0/0:29,0:28:78.15:0,78,983	1/1:1,15:16:42.05:486,42,0	1/1:0,21:21:51.16:632,51,0	1/1:1,27:28:57.18:706,57,0	1/1:1,32:33:93.25:1115,93,0	1/1:0,25:25:63.20:780,63,0	1/1:0,34:34:99:1182,102,0	1/1:0,24:24:69.22:855,69,0	1/1:0,41:41:99:1448,117,0	1/1:0,36:36:99:1263,102,0	1/1:0,43:43:99:1486,120,0	1/1:0,31:31:87.27:1078,87,0	1/1:1,34:35:90.28:1114,90,0	1/1:0,31:31:90.28:1115,90,0	1/1:0,19:19:54.17:669,54,0	1/1:1,24:25:72.17:851,72,0	1/1:0,12:12:36.11:442,36,0	1/1:0,39:39:99:1264,102,0	1/1:0,11:11:24.08:297,24,0	1/1:0,13:13:36.11:446,36,0	1/1:0,23:23:63.20:781,63,0	1/1:0,18:18:54.17:669,54,0	1/1:0,28:28:84.26:1040,84,0	1/1:1,21:22:57.18:706,57,0	1/1:0,11:11:27.08:334,27,0
chr10	22598995	.	T	TA	1522.63	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=2.062;DP=566;FS=3.463;HRun=8;HaplotypeScore=52.6302;InbreedingCoeff=0.9513;MQ=71.87;MQ0=0;MQRankSum=0.309;QD=26.25;ReadPosRankSum=-0.595;VQSLOD=4.1647;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:33.02:0,33,302	0/0:18,0:18:42.01:0,42,384	0/0:15,0:15:33:0,33,297	0/0:4,0:4:6:0,6,55	0/0:25,0:25:66.02:0,66,600	0/0:24,0:24:59.98:0,60,538	0/0:18,0:18:47.94:0,48,415	0/0:24,0:24:63.02:0,63,573	0/0:20,0:20:57.03:0,57,522	0/0:22,0:22:57.01:0,57,518	0/0:24,0:24:60.02:0,60,546	0/0:27,0:27:75.03:0,75,683	0/0:23,0:23:63.03:0,63,577	0/0:21,0:21:63.02:0,63,572	0/0:31,0:31:75.01:0,75,681	0/0:21,0:21:60.01:0,60,542	0/0:20,0:20:54.03:0,54,494	0/0:11,0:11:26.92:0,27,230	0/0:25,0:25:44.99:0,45,412	0/0:29,0:29:72.02:0,72,654	0/0:10,0:10:24.01:0,24,220	0/0:28,0:28:68.98:0,69,619	0/0:23,0:23:51:0,51,466	0/0:14,0:14:39.02:0,39,357	0/0:20,0:20:42:0,42,382	1/1:3,24:27:72.16:796,72,0	1/1:1,22:23:63.19:727,63,0	1/1:3,5:8:12.04:138,12,0
chr10	22599585	.	A	AG	329.95	PASS	AB=0.768;AC=2;AF=0.036;AN=56;BaseQRankSum=-2.492;DP=624;FS=23.807;HRun=0;HaplotypeScore=57.2558;InbreedingCoeff=-0.0373;MQ=86.85;MQ0=0;MQRankSum=-5.114;QD=9.70;ReadPosRankSum=2.711;VQSLOD=1.4373;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:8:21.07:0,21,294	0/0:12,0:12:36.12:0,36,503	0/0:15,0:15:42.13:0,42,559	0/0:28,0:27:57.64:0,58,809	0/0:22,0:22:66.18:0,66,872	0/0:36,0:36:99:0,105,1433	0/0:11,0:11:33.11:0,33,462	0/0:29,0:29:87.29:0,87,1217	0/0:14,0:14:42.14:0,42,587	0/0:21,0:21:63.19:0,63,851	0/0:23,0:23:69.22:0,69,948	0/0:25,0:25:75.25:0,75,1048	0/0:27,0:27:81.25:0,81,1114	0/0:31,0:31:93.30:0,93,1276	0/0:23,0:23:69.23:0,69,965	0/0:26,0:26:78.25:0,78,1073	0/0:14,1:15:21.61:0,22,485	0/1:10,3:13:99:104,0,380	0/0:27,0:27:81.23:0,81,1069	0/0:24,0:24:66.21:0,66,907	0/0:14,0:14:42.13:0,42,572	0/0:24,0:24:72.24:0,72,1006	0/0:26,0:26:78.24:0,78,1057	0/0:21,0:21:63.19:0,63,862	0/0:25,0:25:75.25:0,75,1049	0/0:34,0:34:99:0,102,1426	0/0:29,0:29:87.29:0,87,1216	0/1:13,8:21:99:315,0,482
chr10	22599962	.	T	TAA	2491.26	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-9.150;DP=567;FS=3.096;HRun=8;HaplotypeScore=71.0635;InbreedingCoeff=0.9658;MQ=71.72;MQ0=0;MQRankSum=-0.578;QD=31.14;ReadPosRankSum=2.928;VQSLOD=3.8897;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:75.10:0,75,817	0/0:8,0:8:24.06:0,24,268	0/0:16,0:16:27.01:0,27,296	0/0:18,0:15:26.55:0,27,286	0/0:42,0:42:99:0,111,1237	0/0:19,0:19:51.13:0,51,568	0/0:18,0:18:45.10:0,45,492	0/0:21,0:21:48.09:0,48,525	0/0:19,0:19:51.11:0,51,558	0/0:27,0:27:72.18:0,72,803	0/0:27,0:27:72.15:0,72,778	0/0:24,0:24:53.54:0,54,690	0/0:16,0:16:48.13:0,48,534	0/0:18,0:18:54.15:0,54,601	0/0:16,0:16:39.07:0,39,425	0/0:24,0:24:66.15:0,66,726	0/0:12,0:12:27.02:0,27,301	0/0:10,0:10:24.01:0,24,255	0/0:20,0:20:51.09:0,51,557	0/0:20,0:20:57.15:0,57,635	0/0:12,0:12:24.04:0,24,268	0/0:24,0:24:69.19:0,69,769	0/0:18,0:18:48.11:0,48,524	0/0:12,0:12:36.04:0,36,377	0/0:17,0:17:45.09:0,45,492	1/1:5,18:23:54.15:810,54,0	1/1:5,27:34:68.72:1056,69,0	1/1:6,17:22:7.17:761,7,0
chr10	22600747	.	GA	G	2356.55	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=11.126;DP=641;FS=3.646;HRun=2;HaplotypeScore=63.4180;InbreedingCoeff=0.9978;MQ=86.73;MQ0=0;MQRankSum=-2.189;QD=30.60;ReadPosRankSum=1.150;VQSLOD=3.2655;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:57.18:0,57,833	0/0:7,0:7:21.06:0,21,296	0/0:25,0:25:68.88:0,69,881	0/0:18,0:18:47.76:0,48,649	0/0:27,0:27:81.25:0,81,1174	0/0:24,0:24:72.23:0,72,1059	0/0:19,0:19:57.15:0,57,811	0/0:35,0:35:99:0,102,1477	0/0:23,0:23:69.22:0,69,1010	0/0:30,0:30:90.30:0,90,1329	0/0:21,0:21:60.20:0,60,891	0/0:29,0:29:84.28:0,84,1239	0/0:21,0:21:63.19:0,63,903	0/0:28,0:28:84.27:0,84,1234	0/0:20,0:20:60.20:0,60,897	0/0:29,0:29:84.27:0,84,1239	0/0:23,0:23:66.22:0,66,989	0/0:11,0:11:27.05:0,27,379	0/0:23,0:23:69.21:0,69,975	0/0:30,0:30:87.28:0,87,1283	0/0:13,0:13:39.13:0,39,583	0/0:25,0:25:75.23:0,75,1086	0/0:19,0:19:57.13:0,57,791	0/0:15,0:15:45.14:0,45,655	0/0:30,0:30:90.29:0,90,1310	1/1:3,29:32:87.25:1099,87,0	1/1:2,34:36:81.26:1050,81,0	1/1:0,9:9:27.09:350,27,0
chr10	22601310	.	ATT	A	891.84	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.971;DP=632;FS=2.864;HRun=3;HaplotypeScore=73.0722;InbreedingCoeff=0.9420;MQ=76.86;MQ0=0;MQRankSum=-2.713;QD=37.16;ReadPosRankSum=-3.657;VQSLOD=2.6857;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,132,2486	0/0:9,0:9:27.09:0,27,522	0/0:13,0:13:36.12:0,36,652	0/0:15,0:15:40.69:0,41,708	0/0:38,0:38:99:0,114,2163	0/0:29,0:29:87.29:0,87,1649	0/0:18,0:18:51.17:0,51,986	1/1:2,22:24:66.20:987,66,0	0/0:17,0:17:48.16:0,48,928	0/0:27,0:27:81.28:0,81,1565	0/0:25,0:25:72.24:0,72,1355	0/0:23,0:23:69.24:0,69,1326	0/0:25,0:25:72.23:0,72,1357	0/0:22,0:22:66.23:0,66,1267	0/0:32,0:32:96.33:0,96,1842	0/0:24,0:24:72.22:0,72,1327	0/0:8,0:8:24.08:0,24,461	0/0:3,0:3:9.03:0,9,171	0/0:20,0:20:60.20:0,60,1125	0/0:34,0:34:93.32:0,93,1792	0/0:22,0:22:66.23:0,66,1263	0/0:25,0:25:75.25:0,75,1411	0/0:30,0:30:90.30:0,90,1706	0/0:15,0:15:45.15:0,45,869	0/0:29,0:29:87.28:0,87,1646	0/0:24,0:24:72.25:0,72,1390	0/0:26,0:26:78.27:0,78,1507	0/0:10,0:10:30.10:0,30,579
chr10	22602126	.	GA	G	7332.92	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=14.691;DP=631;FS=0.000;HRun=10;HaplotypeScore=83.4627;InbreedingCoeff=0.9686;MQ=69.02;MQ0=1;MQRankSum=0.895;QD=20.54;ReadPosRankSum=4.483;VQSLOD=5.3312;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,12:13:29.99:260,30,0	0/0:12,0:12:30.08:0,30,332	0/0:21,0:14:2.79:0,3,209	0/0:13,0:12:23.92:0,24,183	1/1:2,30:32:86.98:754,87,0	1/1:9,27:36:71.98:625,72,0	1/1:2,14:16:35.99:313,36,0	0/0:38,1:39:65.12:0,65,908	0/0:15,0:15:16.05:0,16,389	1/1:4,21:25:62.66:531,63,0	1/1:1,27:30:79.04:661,79,0	1/1:3,16:19:41.99:365,42,0	1/1:6,22:28:29.80:488,30,0	1/1:2,15:17:44.98:390,45,0	0/0:26,0:26:56.88:0,57,601	0/0:30,2:32:55.21:0,55,828	0/0:26,0:26:73.07:0,73,791	0/0:12,0:12:30.06:0,30,321	0/0:24,0:24:41.13:0,41,624	0/0:29,1:30:58.16:0,58,861	0/0:24,0:24:57.15:0,57,630	1/1:1,18:19:47.99:417,48,0	1/1:2,21:23:56.99:495,57,0	1/1:1,18:19:41.99:365,42,0	1/1:2,14:16:16.67:336,17,0	1/1:4,30:34:56.75:708,57,0	1/1:1,21:22:56.99:495,57,0	1/1:0,8:8:15:130,15,0
chr10	22602711	.	C	CCATTCAT	1777.21	PASS	AB=0.627;AC=15;AF=0.326;AN=46;BaseQRankSum=8.323;DP=432;FS=4.008;HRun=0;HaplotypeScore=68.7912;InbreedingCoeff=-0.0016;MQ=27.99;MQ0=151;MQRankSum=-4.563;QD=7.22;ReadPosRankSum=0.010;VQSLOD=1.4400;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:3:2.50:0,2,9	0/0:4,0:3:6.02:0,6,148	./.	./.	0/1:9,0:21:72.64:76,0,73	1/1:4,0:7:5.93:56,6,0	0/1:11,0:7:39.67:40,0,79	0/1:16,0:18:10.85:11,0,406	0/0:21,0:13:27.04:0,27,648	0/1:10,0:18:99:159,0,209	0/1:4,0:20:37.08:37,0,54	0/0:5,0:11:3.01:0,3,47	1/1:9,0:13:20.62:146,21,0	./.	0/0:18,0:9:9.03:0,9,189	0/0:13,0:8:14.65:0,15,345	0/0:9,0:3:3.01:0,3,84	./.	0/0:14,0:7:21.07:0,21,456	0/0:29,0:28:75.26:0,75,1777	0/0:7,0:3:9.03:0,9,178	1/1:6,0:9:5.93:55,6,0	0/1:7,0:19:1.36:95,0,1	./.	0/1:9,0:14:29.06:70,0,29	0/1:7,1:16:99:588,0,216	0/1:4,0:14:20.15:589,0,20	0/0:2,0:1:3.01:0,3,47
chr10	22603611	.	CAT	C	6931.21	PASS	AB=0.947;AC=33;AF=0.589;AN=56;BaseQRankSum=8.482;DP=440;FS=0.000;HRun=0;HaplotypeScore=61.4102;InbreedingCoeff=0.7869;MQ=61.66;MQ0=2;MQRankSum=-0.114;QD=23.90;ReadPosRankSum=-0.555;VQSLOD=4.6756;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,8:9:18.06:229,18,0	0/0:18,0:18:1.19:0,1,532	0/0:6,0:4:1.24:0,1,37	0/0:9,0:3:3.01:0,3,50	1/1:4,22:26:57.18:725,57,0	1/1:1,17:18:39.12:497,39,0	1/1:1,15:16:36.12:458,36,0	1/1:12,15:27:72.21:857,72,0	0/0:11,0:11:30.10:0,30,494	1/1:4,17:21:51.16:646,51,0	1/1:7,26:33:51.16:649,51,0	1/1:3,10:13:24.08:306,24,0	1/1:2,13:15:36.12:458,36,0	1/1:1,17:18:45.14:573,45,0	0/0:14,0:14:39.13:0,39,646	0/0:16,1:17:3.95:0,4,607	0/0:10,0:10:27.09:0,27,431	0/0:6,0:6:18.06:0,18,294	0/0:23,0:23:60.20:0,60,981	0/0:26,0:26:63.22:0,63,1047	0/0:10,0:10:18.06:0,18,297	1/1:0,6:6:9.03:115,9,0	1/1:6,7:13:11.96:153,12,0	1/1:2,7:9:21.07:265,21,0	1/1:1,21:21:57.18:726,57,0	1/1:14,1:15:18.34:111,18,0	0/1:17,1:18:23.29:23,0,28	1/1:11,0:11:8.83:141,9,0
chr10	22603625	.	CAT	C	873.54	PASS	AC=2;AF=0.037;AN=54;BaseQRankSum=2.099;DP=444;FS=12.809;HRun=0;HaplotypeScore=89.4269;InbreedingCoeff=0.8011;MQ=60.41;MQ0=2;MQRankSum=-0.816;QD=24.26;ReadPosRankSum=-5.483;VQSLOD=1.8722;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:8:15.56:0,16,59	0/0:12,0:12:33.11:0,33,566	0/0:5,0:4:3.90:0,4,43	./.	0/0:23,0:23:46.88:0,47,259	0/0:18,0:18:41:0,41,237	0/0:17,0:17:38.66:0,39,232	1/1:9,27:36:81.22:968,81,0	0/0:13,0:13:33.11:0,33,552	0/0:22,0:22:25.76:0,26,347	0/0:31,0:31:54.36:0,54,365	0/0:13,0:13:30.79:0,31,233	0/0:17,0:17:40.46:0,40,266	0/0:17,0:17:40.54:0,41,168	0/0:16,0:16:45.15:0,45,756	0/0:17,0:17:44.87:0,45,693	0/0:15,0:15:36.12:0,36,586	0/0:7,0:7:15.94:0,16,259	0/0:22,0:22:54.18:0,54,914	0/0:23,0:23:63.20:0,63,1036	0/0:8,0:8:24.08:0,24,395	0/0:9,0:9:17.26:0,17,169	0/0:6,0:6:10.78:0,11,44	0/0:9,0:9:21.66:0,22,122	0/0:24,0:23:61.73:0,62,379	0/0:16,0:16:39.51:0,40,368	0/0:18,0:18:49.37:0,49,542	0/0:12,0:12:18.03:0,18,189
chr10	22605037	.	TA	T	1098.59	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.982;DP=539;FS=8.728;HRun=9;HaplotypeScore=53.0108;InbreedingCoeff=0.9885;MQ=77.82;MQ0=0;MQRankSum=-4.781;QD=20.73;ReadPosRankSum=1.983;VQSLOD=4.2309;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:27.06:0,27,301	0/0:6,0:6:18.05:0,18,208	0/0:20,0:20:50.89:0,51,529	0/0:11,0:11:27.08:0,27,310	0/0:34,1:35:74.84:0,75,1115	0/0:27,1:28:50.77:0,51,838	0/0:15,0:15:42.11:0,42,474	0/0:34,0:34:90.26:0,90,1029	0/0:15,0:15:39.09:0,39,432	0/0:19,0:19:51.15:0,51,589	0/0:32,0:32:90.25:0,90,1021	0/0:18,0:18:48.14:0,48,554	0/0:25,1:26:44.74:0,45,765	0/0:18,0:18:54.16:0,54,623	0/0:22,0:22:60.18:0,60,692	0/0:29,0:29:81.22:0,81,917	0/0:6,0:6:15.04:0,15,173	0/0:22,0:22:51.15:0,51,589	0/0:18,0:18:54.15:0,54,616	0/0:21,0:21:51.15:0,51,589	0/0:18,0:18:42.12:0,42,485	0/0:15,0:15:36.11:0,36,415	0/0:15,0:15:42.12:0,42,485	0/0:9,0:9:24.07:0,24,277	0/0:22,1:23:38.73:0,39,699	1/1:0,18:18:51.02:466,51,0	1/1:3,24:28:65.07:583,65,0	1/1:0,7:7:21.01:192,21,0
chr10	22605762	.	T	TG	8966.97	PASS	AB=0.569;AC=44;AF=0.786;AN=56;BaseQRankSum=-5.976;DP=577;FS=1.235;HRun=8;HaplotypeScore=78.6805;InbreedingCoeff=0.6813;MQ=90.18;MQ0=0;MQRankSum=-3.752;QD=20.76;ReadPosRankSum=1.879;VQSLOD=5.0280;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:97.11:0,97,867	1/1:2,10:12:27.08:310,27,0	0/0:28,0:28:53.99:0,54,484	0/0:17,0:17:36.01:0,36,329	1/1:9,8:17:2.62:275,3,0	1/1:2,11:13:27.08:311,27,0	1/1:4,21:27:5.88:567,6,0	1/1:6,14:20:14.62:401,15,0	0/1:5,16:21:29.14:399,0,29	1/1:5,10:15:32.97:348,33,0	1/1:10,9:19:42.08:458,42,0	1/1:7,21:28:14.27:669,14,0	1/1:7,20:27:32.68:612,33,0	0/1:6,18:24:45.70:525,0,46	0/0:31,0:32:77.04:0,77,686	0/0:25,0:25:72:0,72,649	1/1:4,21:25:63.19:727,63,0	1/1:2,15:17:5.63:319,6,0	1/1:6,14:20:20.58:456,21,0	1/1:5,15:20:33.06:366,33,0	1/1:5,25:30:32.71:630,33,0	1/1:6,11:17:21.06:242,21,0	1/1:4,7:11:18.05:207,18,0	1/1:7,11:18:8.64:350,9,0	1/1:5,12:18:38.95:427,39,0	1/1:11,1:12:30.45:157,30,0	1/1:19,0:19:41.33:185,41,0	1/1:2,0:2:5.54:25,6,0
chr10	22605767	.	G	GGGA	1699.82	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-7.381;DP=575;FS=0.000;HRun=0;HaplotypeScore=129.1566;InbreedingCoeff=0.9535;MQ=87.98;MQ0=0;MQRankSum=-3.302;QD=41.46;ReadPosRankSum=-1.219;VQSLOD=4.2412;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,108,1612	0/0:11,0:11:28.77:0,29,129	0/0:24,0:24:60.14:0,60,898	0/0:17,0:17:42.05:0,42,624	0/0:13,0:13:30.04:0,30,176	0/0:13,0:13:26.27:0,26,110	0/0:27,0:27:58.11:0,58,306	0/0:23,0:23:51.03:0,51,318	0/0:22,0:22:48.61:0,49,322	0/0:15,0:15:27.09:0,27,115	0/0:20,0:20:22.03:0,22,167	0/0:27,0:27:69.39:0,69,378	0/0:29,0:29:64.37:0,64,343	0/0:24,0:24:55.75:0,56,356	0/0:31,0:31:87.23:0,87,1300	0/0:26,0:26:75.24:0,75,1186	0/0:24,0:24:60.22:0,60,251	0/0:16,0:16:28.67:0,29,144	0/0:22,0:22:55.45:0,55,327	0/0:16,0:16:23.69:0,24,107	0/0:35,0:35:61.24:0,61,306	0/0:13,0:13:18.06:0,18,67	0/0:10,0:10:21.26:0,21,109	0/0:16,0:16:37.55:0,38,206	0/0:17,0:17:27.88:0,28,113	1/1:2,10:15:35.14:735,35,0	1/1:2,21:23:45.15:971,45,0	1/1:0,2:3:6.02:128,6,0
chr10	22606655	.	C	CA	2576.35	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-8.225;DP=690;FS=0.000;HRun=3;HaplotypeScore=62.4854;InbreedingCoeff=0.9991;MQ=89.38;MQ0=0;MQRankSum=-4.178;QD=36.80;ReadPosRankSum=0.920;VQSLOD=4.0700;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:75.23:0,75,899	0/0:11,0:11:30.09:0,30,360	0/0:26,0:26:66.17:0,66,754	0/0:25,0:25:56.99:0,57,646	0/0:34,0:34:99:0,102,1213	0/0:23,0:22:66.20:0,66,792	0/0:25,0:25:72.22:0,72,864	0/0:31,0:31:87.27:0,87,1044	0/0:24,0:24:72.22:0,72,864	0/0:23,0:23:69.21:0,69,828	0/0:26,0:26:75.22:0,75,889	0/0:31,0:31:84.24:0,84,995	0/0:22,0:22:66.17:0,66,767	0/0:19,0:19:54.15:0,54,637	0/0:31,0:31:93.29:0,93,1116	0/0:21,0:21:60.18:0,60,720	0/0:21,0:21:63.19:0,63,756	0/0:20,0:20:51.09:0,51,612	0/0:23,0:23:60.18:0,60,720	0/0:44,0:44:99:0,129,1537	0/0:28,0:28:78.22:0,78,924	0/0:26,0:26:75.23:0,75,900	0/0:22,0:22:63.19:0,63,756	0/0:19,0:19:57.17:0,57,684	0/0:20,0:20:57.17:0,57,684	1/1:1,20:21:24.50:745,24,0	1/1:0,33:33:93.31:1302,93,0	1/1:0,16:16:48.16:672,48,0
chr10	22607035	.	AT	A	1120.77	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.536;DP=657;FS=7.387;HRun=1;HaplotypeScore=58.9430;InbreedingCoeff=0.9042;MQ=84.83;MQ0=0;MQRankSum=-4.497;QD=37.36;ReadPosRankSum=-4.238;VQSLOD=1.8009;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:39.13:0,39,623	0/0:12,0:12:36.12:0,36,567	0/0:31,0:31:90.29:0,90,1352	0/0:12,0:12:36.12:0,36,569	0/0:29,0:29:87.28:0,87,1362	0/0:30,0:30:90.31:0,90,1439	0/0:15,0:15:45.15:0,45,720	1/1:0,30:30:87.29:1216,87,0	0/0:24,0:24:72.23:0,72,1128	0/0:31,0:31:93.32:0,93,1488	0/0:28,0:28:84.28:0,84,1320	0/0:23,0:23:69.24:0,69,1102	0/0:27,0:27:78.27:0,78,1247	0/0:28,0:28:84.29:0,84,1343	0/0:27,0:27:81.28:0,81,1288	0/0:20,0:20:60.20:0,60,959	0/0:18,0:18:54.16:0,54,838	0/0:18,0:18:54.18:0,54,863	0/0:18,0:18:54.18:0,54,837	0/0:48,0:48:99:0,144,2299	0/0:9,0:9:27.09:0,27,432	0/0:24,0:24:72.23:0,72,1129	0/0:20,0:20:57.19:0,57,911	0/0:21,0:21:63.20:0,63,983	0/0:30,0:30:90.30:0,90,1417	0/0:32,0:32:96.30:0,96,1488	0/0:37,0:37:99:0,111,1772	0/0:2,0:2:6.02:0,6,88
chr10	22607482	.	G	GCA	2734.83	PASS	AB=0.773;AC=28;AF=0.609;AN=46;BaseQRankSum=-0.305;DP=575;FS=0.762;HRun=0;HaplotypeScore=146.2906;InbreedingCoeff=0.1062;MQ=57.89;MQ0=9;MQRankSum=-2.464;QD=6.98;ReadPosRankSum=-1.884;VQSLOD=3.1949;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:0.40:0,0,1	0/1:5,3:9:5.08:82,0,5	./.	./.	0/0:13,0:12:0:0,0,0	1/1:19,0:20:3:26,3,0	1/1:17,0:17:5.02:20,5,0	1/1:23,0:23:9.42:70,9,0	0/1:20,8:29:8.42:433,0,8	1/1:24,0:23:25.98:203,26,0	./.	1/1:22,0:22:5.96:43,6,0	1/1:19,0:19:17.04:113,17,0	1/1:12,0:17:10.23:72,10,0	0/0:28,0:29:26.88:0,27,265	0/0:16,0:18:23.73:0,24,228	0/1:20,16:37:30.01:584,0,30	0/1:15,9:25:72.98:319,0,73	0/1:15,2:16:33.38:33,0,88	0/1:8,12:22:75.06:350,0,75	0/1:23,20:42:99:282,0,105	./.	0/0:10,0:10:0:0,0,0	1/1:25,0:25:5.49:48,5,0	1/1:19,0:19:8.36:53,8,0	1/1:5,1:19:14.24:140,14,0	./.	0/1:3,0:3:0:0,0,0
chr10	22608099	.	AT	A	987.50	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=3.479;DP=411;FS=1.507;HRun=8;HaplotypeScore=50.1724;InbreedingCoeff=0.9154;MQ=66.13;MQ0=0;MQRankSum=-0.995;QD=22.44;ReadPosRankSum=0.345;VQSLOD=3.7648;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:39.04:0,39,438	0/0:8,0:8:21.03:0,21,238	0/0:21,0:20:33.52:0,34,422	0/0:8,0:7:17.54:0,18,203	0/0:28,0:29:75.45:0,75,851	0/0:15,0:15:45.10:0,45,528	0/0:12,0:12:30.09:0,30,358	0/0:19,0:19:47.65:0,48,562	0/0:13,0:13:36.03:0,36,399	0/0:8,0:8:24.07:0,24,290	0/0:20,0:20:54.12:0,54,635	0/0:22,0:22:66.12:0,66,764	0/0:21,0:21:54.08:0,54,619	0/0:15,0:15:42.13:0,42,504	0/0:10,0:10:30.09:0,30,362	0/0:17,0:17:51.08:0,51,584	0/0:15,0:15:36.11:0,36,435	0/0:9,0:9:21.02:0,21,237	0/0:10,0:10:30.09:0,30,362	0/0:22,0:22:60.06:0,60,675	0/0:1,0:1:3.01:0,3,36	0/0:15,1:16:10.18:0,10,406	0/0:14,0:14:30.09:0,30,362	0/0:8,0:8:24:0,24,261	0/0:20,0:20:60.15:0,60,709	1/1:1,21:22:63.10:607,63,0	1/1:2,13:15:36.05:347,36,0	1/1:1,6:7:18.03:174,18,0
chr10	22608476	.	G	GA	1456.71	PASS	AB=1.000;AC=7;AF=0.130;AN=54;BaseQRankSum=7.001;DP=572;FS=4.950;HRun=10;HaplotypeScore=68.5368;InbreedingCoeff=0.7379;MQ=65.40;MQ0=0;MQRankSum=-1.619;QD=19.42;ReadPosRankSum=-1.597;VQSLOD=3.9807;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:0,0:20:36.67:0,37,106	0/0:7,0:7:20.98:0,21,172	0/0:17,0:14:2.18:0,2,157	./.	0/0:37,0:37:95.76:0,96,776	0/0:26,0:26:65.75:0,66,524	0/0:22,0:22:59.92:0,60,493	0/0:43,0:43:95.69:0,96,768	0/0:19,0:19:56.84:0,57,453	0/0:19,0:18:44.92:0,45,368	0/0:25,0:25:47.90:0,48,394	0/0:21,0:21:50.92:0,51,419	0/0:27,0:27:59.75:0,60,474	0/0:18,0:19:37.98:0,38,301	0/0:26,0:27:64.94:0,65,522	0/0:16,0:15:38.91:0,39,313	0/0:27,0:27:38.08:0,38,420	0/0:10,0:10:23.96:0,24,194	0/0:12,0:12:35.73:0,36,273	0/0:30,0:30:77.64:0,78,617	0/0:7,0:7:17.96:0,18,145	0/0:18,0:18:53.92:0,54,440	0/0:19,0:20:49.96:0,50,400	0/1:9,0:9:27.23:27,0,59	0/0:19,0:20:34.94:0,35,274	1/1:14,16:30:38.54:608,39,0	1/1:5,25:30:59.44:814,59,0	1/1:1,5:6:5.32:147,5,0
chr10	22608565	.	T	TC	15871.06	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-5.952;DP=591;FS=5.371;HRun=1;HaplotypeScore=66.8402;InbreedingCoeff=0.9986;MQ=82.03;MQ0=0;MQRankSum=-3.513;QD=41.44;ReadPosRankSum=1.650;VQSLOD=5.5087;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,19:23:63.20:922,63,0	0/0:11,0:11:30.10:0,30,390	0/0:17,0:17:48.12:0,48,592	0/0:17,0:17:48.15:0,48,602	1/1:0,26:26:78.26:1169,78,0	1/1:0,23:23:66.22:989,66,0	1/1:1,19:20:51.17:764,51,0	1/1:3,26:29:78.26:1165,78,0	0/0:13,0:13:33.09:0,33,414	1/1:0,22:22:66.22:989,66,0	1/1:0,19:19:51.17:764,51,0	1/1:0,32:32:90.30:1349,90,0	1/1:0,33:33:87.12:1304,87,0	1/1:0,23:23:69.23:1034,69,0	0/0:28,0:28:84.25:0,84,1063	0/0:31,0:31:93.29:0,93,1195	0/0:26,0:26:78.24:0,78,998	0/0:15,0:15:42.14:0,42,545	0/0:24,0:24:72.23:0,72,928	0/0:17,0:17:51.17:0,51,662	0/0:9,0:9:27.07:0,27,334	1/1:1,12:13:36.12:540,36,0	1/1:2,21:23:60.20:899,60,0	1/1:0,15:15:39.13:584,39,0	1/1:0,22:22:60.20:899,60,0	1/1:1,20:21:63.20:925,63,0	1/1:4,29:32:87.29:1304,87,0	1/1:0,6:6:18.06:270,18,0
chr10	22609050	.	A	ATT	1977.86	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=10.777;DP=700;FS=2.606;HRun=8;HaplotypeScore=89.5822;InbreedingCoeff=0.9778;MQ=81.73;MQ0=0;MQRankSum=-3.201;QD=35.32;ReadPosRankSum=0.229;VQSLOD=3.5451;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:55:99:0,156,1728	0/0:7,0:7:9.01:0,9,100	0/0:22,0:22:54.12:0,54,595	0/0:16,0:16:30.05:0,30,316	0/0:27,0:27:69.17:0,69,769	0/0:25,0:26:66.10:0,66,785	0/0:31,0:31:81.20:0,81,902	0/0:39,0:39:96.19:0,96,1054	0/0:18,0:18:54.15:0,54,602	0/0:36,0:36:99:0,102,1137	0/0:14,0:14:42.11:0,42,468	0/0:25,0:25:69.16:0,69,760	0/0:29,0:29:84.20:0,84,927	0/0:22,0:22:54.13:0,54,602	0/0:34,0:35:90.17:0,90,1062	0/0:22,0:22:66.16:0,66,727	0/0:33,0:33:93.21:0,93,1025	0/0:19,0:19:57.15:0,57,636	0/0:23,0:24:62.88:0,63,664	0/0:29,0:29:78.19:0,78,861	0/0:14,0:14:33.06:0,33,356	0/0:19,0:20:53.85:0,54,563	0/0:23,0:23:63.15:0,63,693	0/0:24,0:24:72.19:0,72,802	0/0:33,0:33:87.21:0,87,970	1/1:3,22:26:72.20:1073,72,0	1/1:5,18:23:45.15:714,45,0	1/1:1,6:7:21.07:333,21,0
chr10	22609226	.	A	AACCC	3162.02	PASS	AB=0.571;AC=5;AF=0.089;AN=56;BaseQRankSum=1.014;DP=654;FS=4.406;HRun=0;HaplotypeScore=107.1096;InbreedingCoeff=0.7241;MQ=79.08;MQ0=0;MQRankSum=-3.116;QD=60.81;ReadPosRankSum=-1.641;VQSLOD=4.5392;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,132,2609	0/0:14,0:14:39.13:0,39,779	0/0:21,0:21:18.75:0,19,865	0/0:14,0:14:31.90:0,32,641	0/0:31,0:31:90.30:0,90,1748	0/0:30,0:30:87.28:0,87,1687	0/0:13,0:13:39.12:0,39,744	0/0:30,0:30:63.31:0,63,1707	0/0:31,0:31:93.32:0,93,1845	0/0:22,0:22:66.23:0,66,1318	0/0:22,0:22:66.23:0,66,1301	0/0:24,0:24:69.24:0,69,1366	0/0:35,0:35:99:0,102,2036	0/0:27,0:27:72.23:0,72,1402	0/0:25,0:25:72.25:0,72,1417	0/0:38,0:38:99:0,111,2167	0/0:24,0:24:72.25:0,72,1421	0/0:26,0:26:69.24:0,69,1378	0/0:20,0:20:57.18:0,57,1090	0/0:23,0:23:57.20:0,57,1128	0/0:19,0:19:54.19:0,54,1079	0/0:15,0:15:45.14:0,45,859	0/0:13,0:13:39.13:0,39,768	0/0:18,0:18:54.19:0,54,1050	0/0:22,0:22:63.21:0,63,1219	0/1:6,16:24:50.65:1536,0,51	1/1:3,20:24:60.21:1623,60,0	1/1:1,1:4:6.02:124,6,0
chr10	22609529	.	AGC	A	237.55	PASS	AB=0.731;AC=3;AF=0.054;AN=56;BaseQRankSum=3.051;DP=418;FS=0.000;HRun=0;HaplotypeScore=123.9467;InbreedingCoeff=-0.0665;MQ=68.93;MQ0=0;MQRankSum=-3.731;QD=9.14;ReadPosRankSum=-0.415;VQSLOD=3.2821;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:48.84:0,49,944	0/0:9,0:9:27.09:0,27,548	0/0:9,0:8:20.91:0,21,323	0/0:12,0:11:2.77:0,3,420	0/0:25,0:25:75.26:0,75,1379	0/0:24,0:24:68.90:0,69,1242	0/0:13,0:13:39.13:0,39,691	0/0:31,0:31:90.29:0,90,1637	0/0:13,0:13:39.13:0,39,779	0/0:19,0:19:57.16:0,57,1017	0/0:15,0:15:45.15:0,45,825	0/0:8,0:8:24.08:0,24,460	0/0:13,0:13:39.10:0,39,646	0/0:11,0:11:33.11:0,33,603	0/0:16,0:16:48.16:0,48,964	0/0:20,0:20:60.19:0,60,1182	0/0:20,0:20:57.17:0,57,1112	0/0:28,0:28:68.26:0,68,1329	0/0:17,0:17:45.15:0,45,869	0/0:23,0:23:69.24:0,69,1401	0/0:4,0:4:12:0,12,203	0/0:4,0:4:12.04:0,12,212	0/0:14,0:14:42.14:0,42,775	0/0:6,0:6:18.06:0,18,336	0/0:20,0:20:57.19:0,57,1044	0/1:7,2:9:64.68:65,0,399	0/1:8,4:12:99:150,0,370	0/1:2,3:5:59.48:123,0,59
chr10	22609532	.	C	CTAT	9858.75	PASS	AB=1.000;AC=35;AF=0.625;AN=56;BaseQRankSum=9.743;DP=419;FS=2.552;HRun=0;HaplotypeScore=100.2174;InbreedingCoeff=0.8749;MQ=69.92;MQ0=0;MQRankSum=-4.576;QD=37.06;ReadPosRankSum=0.482;VQSLOD=5.3183;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,16:19:45.15:925,45,0	0/0:7,0:7:18.06:0,18,261	0/0:10,0:9:12.03:0,12,151	0/1:13,0:12:14.36:14,0,197	1/1:7,20:27:57.15:1129,57,0	1/1:6,17:25:51.18:1042,51,0	1/1:5,8:13:24.08:486,24,0	1/1:15,16:31:55.42:1052,55,0	0/0:13,0:13:39.12:0,39,551	1/1:6,11:18:36.12:734,36,0	1/1:2,13:15:36.12:740,36,0	1/1:4,5:9:18.06:370,18,0	1/1:4,9:13:33.11:664,33,0	1/1:5,8:13:24.08:492,24,0	0/0:16,0:16:42.13:0,42,592	0/0:19,0:19:45.15:0,45,655	0/0:19,0:19:22.15:0,22,548	0/0:26,0:26:54.10:0,54,738	0/0:16,0:16:33.11:0,33,480	0/0:23,0:23:66.21:0,66,941	0/0:4,0:4:9.03:0,9,127	1/1:0,3:3:9.03:185,9,0	1/1:5,9:14:27.09:555,27,0	1/1:0,5:5:15.05:308,15,0	1/1:4,16:20:45.15:925,45,0	1/1:10,0:10:6.29:65,6,0	1/1:12,0:13:12.09:80,12,0	1/1:3,0:5:10.64:91,11,0
chr10	22609568	.	T	TC	1274.28	PASS	AB=0.545;AC=5;AF=0.089;AN=56;BaseQRankSum=5.038;DP=434;FS=7.434;HRun=0;HaplotypeScore=88.2361;InbreedingCoeff=0.7730;MQ=70.73;MQ0=0;MQRankSum=-3.143;QD=36.41;ReadPosRankSum=0.763;VQSLOD=3.1545;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:66.17:0,66,883	0/0:7,0:7:21.07:0,21,294	0/0:10,0:10:30.10:0,30,418	0/0:8,0:8:24.08:0,24,335	0/0:26,0:26:75.25:0,75,1048	0/0:18,0:18:51.17:0,51,713	0/0:14,0:14:36.12:0,36,503	0/0:35,0:35:99:0,105,1427	0/0:18,0:18:51.17:0,51,713	0/0:14,0:14:39.13:0,39,546	0/0:16,0:16:45.14:0,45,611	0/0:8,0:8:24.08:0,24,336	0/0:18,0:18:54.17:0,54,737	0/0:15,0:15:42.14:0,42,585	0/0:17,0:17:51.16:0,51,695	0/0:24,0:24:72.24:0,72,1007	0/0:14,0:14:39.13:0,39,545	0/0:21,0:21:60.18:0,60,820	0/0:13,0:13:36.12:0,36,504	0/0:26,0:26:78.26:0,78,1091	0/0:7,0:7:21.07:0,21,292	0/0:7,0:7:21.05:0,21,276	0/0:12,0:12:33.11:0,33,461	0/0:9,0:9:27.09:0,27,378	0/0:20,0:20:60.20:0,60,839	0/1:2,10:12:50.83:398,0,51	1/1:1,13:14:39.13:622,39,0	1/1:0,9:9:24.08:383,24,0
chr10	22609810	.	GA	G	1218.39	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=10.239;DP=592;FS=1.836;HRun=8;HaplotypeScore=67.5253;InbreedingCoeff=0.9944;MQ=77.40;MQ0=0;MQRankSum=-5.768;QD=22.56;ReadPosRankSum=2.224;VQSLOD=4.3441;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:72.22:0,72,869	0/0:9,0:9:21.06:0,21,254	0/0:22,0:22:33.02:0,33,428	0/0:9,0:9:23.56:0,24,261	0/0:17,0:17:45.12:0,45,522	0/0:38,0:38:99:0,105,1266	0/0:18,0:18:51.16:0,51,616	0/0:18,0:18:51.16:0,51,616	0/0:23,0:23:63.17:0,63,737	0/0:26,0:26:75.23:0,75,899	0/0:24,0:24:63.19:0,63,760	0/0:14,0:14:30.09:0,30,362	0/0:28,1:29:55.28:0,55,943	0/0:29,0:29:81.24:0,81,967	0/0:26,0:26:75.23:0,75,906	0/0:22,1:23:37.21:0,37,715	0/0:23,0:23:66.20:0,66,796	0/0:28,0:28:69.21:0,69,832	0/0:14,0:14:31.90:0,32,357	0/0:32,0:32:87.27:0,87,1050	0/0:25,0:25:66.20:0,66,796	0/0:15,0:15:45.13:0,45,534	0/0:18,0:18:42.13:0,42,507	0/0:15,0:15:45.10:0,45,527	0/0:17,0:17:42.13:0,42,507	1/1:1,23:24:66.11:637,66,0	1/1:3,21:24:57.09:549,57,0	1/1:0,6:6:18.03:174,18,0
chr10	22609957	.	A	AC	1860.69	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=1.518;DP=696;FS=8.911;HRun=2;HaplotypeScore=95.9793;InbreedingCoeff=0.9882;MQ=88.36;MQ0=0;MQRankSum=-3.319;QD=37.21;ReadPosRankSum=1.007;VQSLOD=3.5618;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,147,1781	0/0:8,0:8:24.08:0,24,298	0/0:26,0:26:78.23:0,78,946	0/0:26,0:26:72.16:0,72,850	0/0:27,0:27:75.23:0,75,927	0/0:30,0:30:84.25:0,84,1028	0/0:36,0:36:99:0,108,1323	0/0:28,0:28:78.24:0,78,967	0/0:25,0:25:69.22:0,69,855	0/0:19,0:19:54.16:0,54,659	0/0:16,0:16:45.14:0,45,557	0/0:22,0:22:63.19:0,63,768	0/0:25,0:25:72.21:0,72,879	0/0:21,0:21:63.20:0,63,781	0/0:29,0:29:87.27:0,87,1078	0/0:31,0:31:90.28:0,90,1116	0/0:20,0:20:54.17:0,54,668	0/0:21,0:21:60.19:0,60,740	0/0:28,0:28:75.21:0,75,905	0/0:28,0:28:81.22:0,81,967	0/0:43,0:43:99:0,123,1469	0/0:26,0:26:78.23:0,78,954	0/0:20,0:20:54.17:0,54,668	0/0:23,0:23:66.21:0,66,818	0/0:17,0:17:51.15:0,51,621	1/1:1,26:27:75.23:1050,75,0	1/1:0,19:18:54.18:777,54,0	1/1:0,4:4:12.04:173,12,0
chr10	22610121	.	AG	A	2047.65	PASS	AB=0.525;AC=5;AF=0.089;AN=56;BaseQRankSum=11.533;DP=750;FS=9.004;HRun=1;HaplotypeScore=75.1922;InbreedingCoeff=0.7796;MQ=88.28;MQ0=0;MQRankSum=-2.136;QD=33.57;ReadPosRankSum=1.219;VQSLOD=2.8833;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:68,0:68:99:0,199,3093	0/0:11,0:11:33.11:0,33,524	0/0:35,0:35:99:0,105,1591	0/0:24,0:24:23.34:0,23,759	0/0:19,0:19:57.19:0,57,908	0/0:25,0:25:75.26:0,75,1196	0/0:27,0:27:81.26:0,81,1266	0/0:33,0:33:96.33:0,96,1535	0/0:22,0:22:66.22:0,66,1050	0/0:24,0:24:72.22:0,72,1070	0/0:28,0:28:81.26:0,81,1269	0/0:34,0:34:99:0,102,1577	0/0:30,0:30:90.31:0,90,1432	0/0:25,0:25:75.26:0,75,1194	0/0:28,0:28:84.26:0,84,1297	0/0:31,0:31:93.29:0,93,1440	0/0:33,0:32:99:0,99,1550	0/0:23,0:23:66.21:0,66,1022	0/0:18,0:18:54.17:0,54,813	0/0:21,0:21:63.21:0,63,1007	0/0:34,0:34:99:0,102,1628	0/0:24,0:24:69.20:0,69,1041	0/0:28,0:28:84.29:0,84,1335	0/0:28,0:28:84.29:0,84,1323	0/0:16,0:16:48.14:0,48,721	0/1:2,19:21:32.78:710,0,33	1/1:0,24:24:66.19:922,66,0	1/1:0,16:16:39.13:545,39,0
chr10	22610861	.	T	TA	2961.68	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-0.167;DP=605;FS=11.497;HRun=0;HaplotypeScore=84.1661;InbreedingCoeff=0.9980;MQ=83.00;MQ0=0;MQRankSum=-2.673;QD=41.13;ReadPosRankSum=0.350;VQSLOD=3.2678;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:42.13:0,42,570	0/0:16,0:16:48.16:0,48,671	0/0:20,0:20:60.19:0,60,823	0/0:27,0:27:67.06:0,67,923	0/0:27,0:27:81.26:0,81,1116	0/0:21,0:21:63.21:0,63,881	0/0:15,0:15:45.14:0,45,614	0/0:30,0:30:83.76:0,84,1117	0/0:16,0:16:48.16:0,48,671	0/0:33,0:33:99:0,99,1372	0/0:21,0:21:63.21:0,63,881	0/0:24,0:24:72.23:0,72,992	0/0:22,0:22:66.18:0,66,868	0/0:15,0:15:45.15:0,45,629	0/0:24,0:24:72.24:0,72,1007	0/0:30,0:30:90.29:0,90,1245	0/0:16,0:16:48.16:0,48,671	0/0:12,0:12:36.03:0,36,459	0/0:19,0:19:40.83:0,41,706	0/0:32,0:32:96.32:0,96,1331	0/0:9,0:9:27.08:0,27,362	0/0:21,0:21:63.20:0,63,864	0/0:26,0:26:78.26:0,78,1090	0/0:19,0:19:57.19:0,57,796	0/0:24,0:24:72.24:0,72,1007	1/1:2,25:27:36.02:1094,36,0	1/1:1,36:36:99:1675,105,0	1/1:0,8:8:21.07:335,21,0
chr10	22611008	.	G	GT	2438.95	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-0.604;DP=620;FS=1.537;HRun=6;HaplotypeScore=68.2757;InbreedingCoeff=0.9996;MQ=71.61;MQ0=0;MQRankSum=-1.447;QD=31.27;ReadPosRankSum=0.610;VQSLOD=4.1657;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:78.17:0,78,795	0/0:11,0:11:33.07:0,33,336	0/0:19,0:19:54.91:0,55,525	0/0:14,0:14:36.08:0,36,365	0/0:27,0:27:81.18:0,81,826	0/0:25,0:25:69.15:0,69,704	0/0:19,0:19:54.06:0,54,527	0/0:32,0:32:78.15:0,78,790	0/0:16,0:16:42.10:0,42,429	0/0:29,0:29:84.17:0,84,848	0/0:21,0:21:45.09:0,45,459	0/0:26,0:26:69.14:0,69,697	0/0:25,0:25:66.14:0,66,673	0/0:22,0:22:63.13:0,63,635	0/0:30,0:30:84.17:0,84,849	0/0:34,0:34:93.21:0,93,948	0/0:24,0:24:57.12:0,57,581	0/0:14,0:14:36.01:0,36,343	0/0:16,0:16:33.07:0,33,336	0/0:26,0:26:69.13:0,69,695	0/0:15,0:15:42.09:0,42,428	0/0:16,0:16:45.10:0,45,459	0/0:15,0:15:42.09:0,42,428	0/0:16,0:16:48.08:0,48,480	0/0:20,0:20:48.10:0,48,489	1/1:2,24:26:44.59:846,45,0	1/1:2,37:39:99:1283,102,0	1/1:1,12:13:36.12:453,36,0
chr10	22611791	.	AT	A	2230.49	PASS	AB=0.545;AC=5;AF=0.089;AN=56;BaseQRankSum=12.475;DP=804;FS=18.516;HRun=4;HaplotypeScore=78.3140;InbreedingCoeff=0.7804;MQ=62.46;MQ0=0;MQRankSum=-0.855;QD=28.60;ReadPosRankSum=2.125;VQSLOD=2.0252;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:90.30:0,90,1260	0/0:16,0:16:48.16:0,48,665	0/0:32,0:30:81.24:0,81,1076	0/0:24,0:22:59.28:0,59,757	0/0:35,0:35:99:0,105,1411	0/0:26,0:26:72.24:0,72,1008	0/0:29,0:29:81.26:0,81,1118	0/0:31,0:31:90.29:0,90,1229	0/0:25,0:25:69.23:0,69,966	0/0:33,0:33:96.31:0,96,1316	0/0:19,0:19:54.16:0,54,723	0/0:36,0:36:99:0,105,1463	0/0:23,0:23:60.20:0,60,840	0/0:34,0:34:99:0,102,1428	0/0:36,0:36:99:0,102,1411	0/0:45,0:45:99:0,132,1830	0/0:23,0:23:63.21:0,63,882	0/0:31,0:31:78.26:0,78,1091	0/0:28,0:28:81.22:0,81,1090	0/0:31,0:31:90.30:0,90,1253	0/0:25,0:25:72.21:0,72,987	0/0:24,0:24:72.24:0,72,1008	0/0:33,0:33:99:0,99,1366	0/0:23,0:23:66.22:0,66,924	0/0:31,0:31:84.28:0,84,1171	0/1:5,25:30:80.76:813,0,81	1/1:0,32:32:90.28:1080,90,0	1/1:1,15:16:39.12:468,39,0
chr10	22615228	.	CT	C	4818.05	PASS	AB=0.697;AC=14;AF=0.250;AN=56;BaseQRankSum=10.334;DP=663;FS=2.913;HRun=4;HaplotypeScore=78.9061;InbreedingCoeff=-0.3344;MQ=71.41;MQ0=1;MQRankSum=-9.601;QD=11.75;ReadPosRankSum=-0.509;VQSLOD=2.5631;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:9,9:18:38.93:217,0,39	0/0:5,0:5:15.05:0,15,209	0/0:26,0:26:75.12:0,75,962	0/0:9,0:9:25.62:0,26,313	0/1:22,19:41:27.68:481,0,28	0/1:21,15:36:99:437,0,401	0/1:9,5:14:99:141,0,152	0/1:14,13:27:99:368,0,292	0/0:13,0:13:39.13:0,39,546	0/1:22,10:32:99:269,0,505	0/1:19,20:39:99:389,0,196	0/1:15,15:30:99:466,0,124	0/1:17,14:31:99:343,0,185	0/1:12,17:29:62.48:509,0,62	0/0:23,0:22:60.17:0,60,815	0/0:29,0:29:81.27:0,81,1122	0/0:21,0:21:63.17:0,63,856	0/0:8,0:8:22.62:0,23,296	0/0:19,0:19:54.16:0,54,712	0/0:27,0:27:78.23:0,78,1042	0/0:11,0:11:30.10:0,30,420	0/1:21,17:38:99:520,0,209	0/1:16,9:25:99:232,0,173	0/1:4,3:7:44.33:60,0,44	0/1:29,14:43:99:386,0,427	0/0:26,0:26:78.26:0,78,1090	0/0:28,0:28:72.24:0,72,1006	0/0:8,0:8:24.08:0,24,336
chr10	22615314	.	TAAAAA	T	14310.10	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=4.593;DP=567;FS=10.505;HRun=9;HaplotypeScore=141.8868;InbreedingCoeff=0.9890;MQ=68.71;MQ0=0;MQRankSum=-6.150;QD=48.34;ReadPosRankSum=0.755;VQSLOD=2.2212;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,21:25:34.40:1098,34,0	0/0:9,0:9:27.09:0,27,837	0/0:15,0:13:26.78:0,27,428	0/0:19,0:18:7.85:0,8,533	1/1:2,24:26:75.20:1312,75,0	1/1:4,22:26:69.22:1295,69,0	1/1:2,14:16:27.09:522,27,0	1/1:3,15:18:45.12:821,45,0	0/0:16,0:16:48.16:0,48,1453	1/1:1,20:21:60.21:1152,60,0	1/1:1,24:25:69.19:1282,69,0	1/1:3,21:24:60.12:1086,60,0	1/1:3,15:18:51.11:939,51,0	1/1:6,11:17:48.06:814,48,0	0/0:21,0:20:57.20:0,57,1720	0/0:25,0:25:63.22:0,63,1913	0/0:20,0:20:56.24:0,56,1736	0/0:9,0:9:27.06:0,27,760	0/0:19,0:19:51.18:0,51,1468	0/0:29,0:29:84.28:0,84,2474	0/0:11,0:11:33.11:0,33,1020	1/1:5,13:18:51.06:867,51,0	1/1:1,12:13:39.12:721,39,0	1/1:2,16:18:39.05:674,39,0	1/1:1,30:31:90.31:1727,90,0	0/0:36,0:36:94.25:0,94,527	0/0:30,0:29:64.30:0,64,285	0/0:9,0:9:23.87:0,24,101
chr10	22615320	.	AAAAG	A	5021.34	PASS	AB=1.000;AC=30;AF=0.536;AN=56;BaseQRankSum=16.047;DP=575;FS=2.334;HRun=0;HaplotypeScore=160.9746;InbreedingCoeff=0.6213;MQ=68.12;MQ0=0;MQRankSum=-7.346;QD=12.71;ReadPosRankSum=5.489;VQSLOD=4.1429;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:24:17.10:101,17,0	0/0:9,0:9:27.09:0,27,695	0/0:19,0:15:32.94:0,33,445	0/1:19,0:17:0.17:0,0,328	0/1:28,0:28:52.85:86,0,53	1/1:24,0:24:46.27:168,46,0	0/1:16,0:16:12.80:70,0,13	1/1:16,0:16:10.94:72,11,0	0/0:19,0:19:57.17:0,57,1306	0/1:27,0:27:53.64:54,0,92	1/1:24,0:24:34.97:173,35,0	1/1:22,0:22:34.72:115,35,0	1/1:18,0:18:21.01:118,21,0	0/1:18,0:18:9.18:75,0,9	0/0:21,0:20:63.18:0,63,1444	0/0:21,0:21:63.21:0,63,1552	0/0:20,0:20:60.15:0,60,1457	0/0:11,0:11:30.08:0,30,700	0/0:21,0:21:63.19:0,63,1319	0/0:28,0:28:81.27:0,81,1972	0/0:11,0:11:33.11:0,33,858	1/1:17,0:17:27.27:88,27,0	1/1:12,0:12:23.26:79,23,0	0/1:20,0:20:6.40:49,0,6	1/1:31,0:31:65.98:250,66,0	1/1:1,36:37:99:1749,108,0	1/1:0,29:29:75.25:1299,75,0	1/1:0,12:12:27.09:477,27,0
chr10	22616225	.	AGT	A	7598.55	PASS	AB=0.720;AC=30;AF=0.536;AN=56;BaseQRankSum=12.463;DP=687;FS=11.957;HRun=0;HaplotypeScore=99.4297;InbreedingCoeff=0.6952;MQ=62.91;MQ0=6;MQRankSum=0.609;QD=18.53;ReadPosRankSum=1.673;VQSLOD=4.3653;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:31:36.46:0,36,315	0/1:8,2:10:17.30:17,0,193	0/0:14,0:6:4.83:0,5,52	0/0:16,0:5:0.90:0,1,17	1/1:4,27:30:58.23:766,58,0	1/1:9,26:35:63.19:742,63,0	0/1:7,14:21:24.08:382,0,24	0/0:41,0:41:72.20:0,72,1086	0/0:20,0:20:42.12:0,42,638	1/1:5,20:25:60.10:658,60,0	0/1:3,18:21:5.21:417,0,5	1/1:4,21:25:63.19:742,63,0	1/1:8,21:30:60.01:685,60,0	1/1:3,17:20:45.13:530,45,0	0/0:29,1:30:42.93:0,43,1146	0/1:26,3:29:1.44:1,0,916	0/0:23,0:23:48.15:0,48,726	0/0:19,1:21:15.66:0,16,636	0/0:22,0:22:38.79:0,39,532	0/0:28,1:29:12.83:0,13,673	0/0:29,0:29:40.51:0,41,815	1/1:3,17:21:38.95:438,39,0	1/1:4,15:19:14:399,14,0	1/1:4,10:13:27.08:318,27,0	1/1:5,27:31:60.18:707,60,0	1/1:7,2:32:25.05:345,25,0	1/1:9,0:39:83.27:407,83,0	1/1:0,0:6:9.77:45,10,0
chr10	22616586	.	TA	T	1452.86	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.864;DP=655;FS=0.000;HRun=4;HaplotypeScore=67.4687;InbreedingCoeff=0.9908;MQ=90.44;MQ0=0;MQRankSum=-3.973;QD=28.49;ReadPosRankSum=2.859;VQSLOD=3.4864;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,46:51:99:1548,129,0	0/0:9,0:8:27.09:0,27,378	0/0:28,0:28:66.22:0,66,903	0/0:27,0:27:59.44:0,59,787	0/0:31,0:31:93.29:0,93,1269	0/0:29,0:29:84.24:0,84,1125	0/0:18,0:18:54.16:0,54,738	0/0:27,0:27:78.25:0,78,1075	0/0:23,0:23:60.19:0,60,823	0/0:15,0:15:45.13:0,45,600	0/0:12,0:12:33.10:0,33,447	0/0:25,0:25:75.25:0,75,1049	0/0:25,0:25:75.23:0,75,1032	0/0:24,0:24:66.22:0,66,924	0/0:24,0:24:69.23:0,69,966	0/0:31,0:31:90.28:0,90,1242	0/0:25,0:25:66.22:0,66,924	0/0:17,0:17:51.14:0,51,678	0/0:18,0:18:54.18:0,54,756	0/0:26,0:26:75.24:0,75,1033	0/0:25,0:25:75.23:0,75,1034	0/0:23,0:23:66.22:0,66,912	0/0:15,0:15:45.14:0,45,614	0/0:26,0:26:75.24:0,75,1034	0/0:22,0:22:63.21:0,63,882	0/0:25,0:25:75.25:0,75,1050	0/0:28,0:28:75.23:0,75,1029	0/0:6,0:6:18.06:0,18,252
chr10	22616650	.	AGGAAGC	A	2408.62	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=7.294;DP=604;FS=2.106;HRun=0;HaplotypeScore=130.4963;InbreedingCoeff=0.9261;MQ=88.17;MQ0=0;MQRankSum=-8.794;QD=53.52;ReadPosRankSum=1.643;VQSLOD=4.0104;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,141,4851	0/0:5,0:5:15.03:0,15,448	0/0:28,0:28:72.21:0,72,2313	0/0:26,0:26:66.20:0,66,2071	0/0:26,0:26:69.22:0,69,2240	0/0:17,0:17:51.17:0,51,1631	0/0:17,0:17:51.18:0,51,1802	0/0:36,0:36:99:0,105,3452	0/0:25,0:25:72.22:0,72,2355	0/0:21,0:21:60.21:0,60,2086	0/0:27,0:27:78.27:0,78,2638	0/0:20,0:20:60.21:0,60,2024	0/0:23,0:23:66.23:0,66,2186	0/0:8,0:8:18.06:0,18,632	0/0:28,0:28:81.28:0,81,2804	0/0:24,0:24:72.25:0,72,2470	0/0:20,0:20:60.21:0,60,2040	0/0:16,0:16:42.14:0,42,1322	0/0:16,0:16:45.15:0,45,1436	0/0:26,0:26:78.27:0,78,2745	0/0:24,0:24:63.22:0,63,2207	0/0:21,0:21:60.20:0,60,1928	0/0:20,0:20:57.18:0,57,1866	0/0:18,0:18:54.19:0,54,1877	0/0:17,0:17:51.18:0,51,1746	1/1:1,17:18:51.15:1073,51,0	1/1:3,23:26:60.21:1398,60,0	1/1:0,1:1:3.01:70,3,0
chr10	22617019	.	G	GA	8571.84	PASS	AB=0.917;AC=29;AF=0.518;AN=56;BaseQRankSum=4.505;DP=637;FS=2.695;HRun=8;HaplotypeScore=92.4487;InbreedingCoeff=0.9276;MQ=79.32;MQ0=0;MQRankSum=-0.462;QD=24.15;ReadPosRankSum=-0.151;VQSLOD=5.1045;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,27:33:66.03:738,66,0	0/0:7,0:7:21.01:0,21,192	0/0:25,0:24:40.01:0,40,393	0/0:21,0:20:35.32:0,35,363	1/1:1,20:21:48.14:550,48,0	1/1:1,23:23:60.18:692,60,0	1/1:1,28:29:69.21:796,69,0	1/1:10,20:30:60.15:671,60,0	0/0:26,0:26:72.03:0,72,658	1/1:2,23:26:72.01:786,72,0	1/1:1,13:14:36.11:413,36,0	1/1:4,12:16:32.99:363,33,0	1/1:2,29:31:69.20:796,69,0	1/1:2,20:22:51.15:588,51,0	0/0:26,0:26:65.96:0,66,591	0/0:25,0:25:69:0,69,622	0/0:24,0:24:57.02:0,57,521	0/0:23,0:23:63.03:0,63,575	0/0:21,0:21:57:0,57,515	0/0:28,0:28:75.03:0,75,685	0/0:17,0:17:39.01:0,39,357	1/1:1,12:13:30.09:346,30,0	1/1:3,11:14:32.96:361,33,0	1/1:4,27:31:69.21:796,69,0	1/1:6,23:28:43.83:660,44,0	0/1:20,2:22:15.21:15,0,385	0/0:34,0:34:96.03:0,96,878	0/0:5,0:5:15.01:0,15,137
chr10	22617768	.	TA	T	1326.89	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=1.342;DP=565;FS=0.000;HRun=9;HaplotypeScore=71.6121;InbreedingCoeff=0.9981;MQ=81.66;MQ0=0;MQRankSum=-2.360;QD=22.11;ReadPosRankSum=1.384;VQSLOD=4.4049;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:36:76.68:0,77,390	0/0:11,0:11:30.09:0,30,346	0/0:24,0:24:56.90:0,57,627	0/0:13,0:12:27.96:0,28,311	0/0:31,0:31:84.23:0,84,950	0/0:24,1:25:47.76:0,48,804	0/0:20,0:20:54.16:0,54,623	0/0:31,0:31:69.18:0,69,784	0/0:10,0:10:27.08:0,27,312	0/0:22,1:23:35.87:0,36,656	0/0:26,1:27:47.71:0,48,781	0/0:25,0:25:64.42:0,64,722	0/0:20,0:20:60.16:0,60,675	0/0:13,0:13:36.11:0,36,416	0/0:24,0:24:60.18:0,60,692	0/0:23,0:23:69.20:0,69,796	0/0:22,0:22:63.19:0,63,727	0/0:20,0:20:60.18:0,60,692	0/0:16,0:16:36.11:0,36,416	0/0:16,0:16:48.14:0,48,554	0/0:10,0:10:27.08:0,27,311	0/0:13,0:13:33.09:0,33,373	0/0:23,0:23:60.18:0,60,691	0/0:10,0:10:27.08:0,27,312	0/0:19,0:19:54.15:0,54,615	1/1:1,24:25:40.40:619,40,0	1/1:2,21:23:60.03:549,60,0	1/1:1,11:12:33.02:302,33,0
chr10	22618190	.	C	CT	9122.51	PASS	AB=0.929;AC=29;AF=0.518;AN=56;BaseQRankSum=7.245;DP=615;FS=1.008;HRun=7;HaplotypeScore=88.4060;InbreedingCoeff=0.9452;MQ=71.75;MQ0=0;MQRankSum=-10.425;QD=27.23;ReadPosRankSum=-3.554;VQSLOD=3.6889;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:27:61.58:374,62,0	0/0:13,0:13:36.06:0,36,347	0/0:15,0:15:10.57:0,11,215	0/0:14,0:14:25.76:0,26,309	1/1:6,15:21:25.17:567,25,0	1/1:4,19:23:57.11:663,57,0	1/1:4,19:23:63.19:753,63,0	1/1:7,23:30:69.20:822,69,0	0/0:26,0:26:63.05:0,63,593	1/1:3,10:13:33.10:398,33,0	1/1:3,17:20:54.12:636,54,0	1/1:6,26:32:90.27:1072,90,0	1/1:6,24:30:81.24:965,81,0	1/1:7,8:15:36.07:396,36,0	0/0:33,0:33:87.13:0,87,840	0/0:28,0:28:74.13:0,74,695	0/0:26,0:26:72.11:0,72,695	0/0:29,0:29:72.11:0,72,694	0/0:18,0:18:45.04:0,45,423	0/0:23,0:23:60.08:0,60,579	0/0:13,0:13:27.04:0,27,261	1/1:0,14:14:42.13:504,42,0	1/1:7,19:27:69.04:795,69,0	1/1:5,16:21:39.01:415,39,0	1/1:7,19:26:66.17:760,66,0	0/1:12,1:13:3.21:3,0,251	0/0:28,0:28:84.14:0,84,811	0/0:14,0:14:42.02:0,42,392
chr10	22618197	.	T	TC	3662.57	PASS	AB=0.988;AC=21;AF=0.375;AN=56;BaseQRankSum=14.559;DP=630;FS=1.729;HRun=2;HaplotypeScore=114.3495;InbreedingCoeff=0.4634;MQ=76.74;MQ0=0;MQRankSum=-9.546;QD=11.20;ReadPosRankSum=1.010;VQSLOD=2.0799;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,27:28:63.21:876,63,0	0/0:14,0:14:39.11:0,39,468	0/0:19,0:19:37.18:0,37,405	0/0:18,0:18:37.70:0,38,471	0/1:24,0:24:82.04:167,0,82	1/1:22,0:22:2.55:211,3,0	1/1:23,0:23:21.48:248,21,0	0/1:31,0:31:99:127,0,110	0/0:26,0:26:69.17:0,69,806	0/1:13,0:13:18.84:108,0,19	1/1:19,0:19:46.61:227,47,0	1/1:31,0:31:42.67:370,43,0	1/1:28,0:28:57.79:400,58,0	0/1:18,0:19:59.46:120,0,59	0/0:33,0:33:96.26:0,96,1138	0/0:28,0:28:78.10:0,78,930	0/0:26,0:26:78.03:0,78,896	0/0:29,0:29:82.04:0,82,943	0/0:17,0:17:45.12:0,45,525	0/0:26,0:26:75:0,75,830	0/0:11,0:11:33.09:0,33,386	0/1:17,0:17:32.32:172,0,32	0/1:25,1:26:3.18:267,0,3	0/1:22,0:22:34.33:94,0,34	1/1:23,1:24:20.55:276,21,0	0/0:12,0:12:24.20:0,24,352	0/0:30,0:30:90.24:0,90,1072	0/0:14,0:14:36.11:0,36,444
chr10	22618216	.	CT	C	8854.54	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=14.955;DP=635;FS=7.268;HRun=1;HaplotypeScore=92.0330;InbreedingCoeff=0.9999;MQ=85.55;MQ0=0;MQRankSum=-8.389;QD=33.29;ReadPosRankSum=0.994;VQSLOD=4.2006;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:66.16:0,66,980	0/0:15,0:15:42.13:0,42,648	0/0:28,0:28:84.29:0,84,1332	0/0:20,0:20:57.14:0,57,859	1/1:0,20:20:54.14:724,54,0	1/1:0,22:22:51.17:710,51,0	1/1:0,21:21:57.19:792,57,0	0/0:32,0:32:90.30:0,90,1419	0/0:22,0:22:63.21:0,63,1004	1/1:0,17:17:47.97:617,48,0	1/1:2,19:21:48.08:626,48,0	1/1:2,28:30:84.28:1161,84,0	1/1:0,25:25:69.23:958,69,0	1/1:0,23:23:54.18:753,54,0	0/0:34,0:34:99:0,102,1628	0/0:24,0:24:69.22:0,69,1080	0/0:27,0:27:75.26:0,75,1198	0/0:32,0:32:93.32:0,93,1477	0/0:18,0:18:51.17:0,51,816	0/0:24,0:24:69.24:0,69,1103	0/0:15,0:15:45.14:0,45,695	1/1:1,14:15:33.10:441,33,0	1/1:3,22:25:51.17:707,51,0	1/1:0,22:22:42.14:585,42,0	1/1:1,24:25:57.19:781,57,0	0/0:11,0:11:33.11:0,33,508	0/0:29,0:29:87.28:0,87,1368	0/0:13,0:13:39.13:0,39,622
chr10	22619052	.	G	GAGT	16767.74	PASS	AB=0.939;AC=25;AF=0.446;AN=56;BaseQRankSum=-13.730;DP=707;FS=3.827;HRun=0;HaplotypeScore=96.7536;InbreedingCoeff=0.9276;MQ=64.45;MQ0=0;MQRankSum=-2.052;QD=49.32;ReadPosRankSum=1.417;VQSLOD=7.2352;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,150,2434	0/0:11,0:11:30.10:0,30,496	0/0:21,0:21:63.19:0,63,994	0/0:17,0:17:42.14:0,42,686	1/1:3,29:32:63.22:1423,63,0	1/1:3,17:21:48.16:1084,48,0	1/1:4,25:30:72.25:1592,72,0	0/0:27,0:27:72.24:0,72,1173	0/0:21,0:21:60.21:0,60,999	1/1:7,24:31:81.23:1729,81,0	1/1:5,20:26:60.21:1353,60,0	1/1:3,18:21:54.19:1209,54,0	1/1:4,33:37:99:2227,99,0	1/1:3,24:28:63.22:1423,63,0	0/0:35,0:35:99:0,105,1722	0/0:30,0:30:84.29:0,84,1399	0/0:16,0:16:45.13:0,45,722	0/0:23,0:23:69.24:0,69,1140	0/0:24,0:24:60.21:0,60,994	0/0:25,0:25:69.22:0,69,1121	0/0:24,0:24:72.25:0,72,1199	1/1:0,20:21:54.19:1222,54,0	1/1:1,20:23:60.21:1353,60,0	1/1:1,23:24:54.01:1224,54,0	1/1:1,14:15:39.13:881,39,0	0/1:29,2:31:48.51:49,0,1260	0/0:31,0:31:90.29:0,90,1470	0/0:10,0:10:30.10:0,30,500
chr10	22619586	.	T	TC	1414.82	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-9.859;DP=507;FS=0.000;HRun=2;HaplotypeScore=47.3084;InbreedingCoeff=0.9464;MQ=75.51;MQ0=0;MQRankSum=-2.602;QD=40.42;ReadPosRankSum=-5.157;VQSLOD=1.8532;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:42.11:0,42,504	0/0:6,0:6:15.05:0,15,186	0/0:11,0:11:27.08:0,27,335	0/0:13,0:13:30.07:0,30,347	0/0:30,0:30:87.26:0,87,1066	0/0:28,0:28:84.26:0,84,1041	0/0:6,0:6:18.06:0,18,223	1/1:0,35:35:99:1510,105,0	0/0:14,0:14:42.13:0,42,521	0/0:14,0:14:36.11:0,36,446	0/0:27,0:27:78.24:0,78,955	0/0:16,0:16:47.98:0,48,572	0/0:23,0:23:69.22:0,69,855	0/0:12,0:12:36.11:0,36,442	0/0:13,0:13:39.09:0,39,467	0/0:12,0:12:36.11:0,36,446	0/0:26,0:25:72.21:0,72,877	0/0:16,0:16:45.14:0,45,552	0/0:26,0:26:63.18:0,63,767	0/0:26,0:26:78.25:0,78,967	0/0:20,0:20:60.19:0,60,743	0/0:15,0:15:42.13:0,42,521	0/0:20,0:20:54.17:0,54,668	0/0:4,0:4:12.04:0,12,149	0/0:21,0:21:63.18:0,63,757	0/0:17,0:17:51.16:0,51,632	0/0:26,0:26:78.23:0,78,954	0/0:15,0:15:39.12:0,39,484
chr10	22621316	.	GA	G	944.03	PASS	AB=0.909;AC=7;AF=0.125;AN=56;BaseQRankSum=0.792;DP=641;FS=13.618;HRun=11;HaplotypeScore=91.8072;InbreedingCoeff=0.8551;MQ=76.96;MQ0=0;MQRankSum=0.266;QD=13.11;ReadPosRankSum=2.905;VQSLOD=2.2710;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:45.10:0,45,472	0/1:9,1:10:3.59:4,0,171	0/0:20,1:21:10.94:0,11,285	0/0:20,0:19:31.80:0,32,347	0/0:46,2:48:86.54:0,87,1089	0/0:27,2:30:16.60:0,17,533	0/0:11,0:11:33.07:0,33,344	0/0:18,0:44:95.53:0,96,585	0/0:14,1:15:17.46:0,17,390	0/0:37,0:38:81.04:0,81,822	0/0:29,0:29:69.11:0,69,714	0/0:20,0:20:57.08:0,57,582	0/0:24,2:28:13.64:0,14,511	0/0:15,1:17:35.91:0,36,345	0/0:3,0:22:37.16:0,37,194	0/0:8,0:28:46.08:0,46,259	0/0:19,0:19:51.09:0,51,526	0/0:12,0:12:33.08:0,33,352	0/0:14,0:15:35.88:0,36,343	0/0:30,2:34:40.44:0,40,769	0/0:11,0:11:33.08:0,33,346	0/0:17,0:17:39.09:0,39,409	0/0:8,0:24:45.96:0,46,265	0/0:13,0:15:38.90:0,39,387	0/0:30,0:31:78.02:0,78,808	1/1:2,21:23:56.90:468,57,0	1/1:6,21:27:56.92:468,57,0	1/1:5,7:12:17.96:148,18,0
chr10	22621536	.	A	AATGGTTG	59626.57	PASS	AC=50;AF=0.926;AN=54;BaseQRankSum=-7.448;DP=672;FS=1.947;HRun=0;HaplotypeScore=134.9978;InbreedingCoeff=0.9858;MQ=76.94;MQ0=0;MQRankSum=-10.669;QD=95.56;ReadPosRankSum=4.197;VQSLOD=6.0970;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,8:14:30.10:1070,30,0	1/1:0,6:7:21.07:866,21,0	0/0:24,0:24:63.20:0,63,1573	0/0:24,0:24:66.09:0,66,1652	1/1:5,25:39:93.23:3335,93,0	1/1:8,17:30:72.25:2863,72,0	1/1:2,8:14:30.10:1204,30,0	1/1:8,16:35:99:3592,105,0	1/1:3,18:27:60.21:2498,60,0	1/1:9,27:45:99:4636,129,0	1/1:3,12:18:48.16:1686,48,0	1/1:2,22:26:63.22:2624,63,0	1/1:6,30:41:99:4070,99,0	1/1:3,22:30:69.24:2856,69,0	1/1:3,19:28:66.23:2639,66,0	1/1:4,21:29:75.26:3010,75,0	1/1:5,5:14:20.16:883,20,0	1/1:4,4:8:17.73:639,18,0	1/1:5,7:18:48.14:1611,48,0	1/1:3,12:22:60.07:1884,60,0	1/1:2,5:11:18.06:752,18,0	1/1:3,22:26:75.26:2889,75,0	1/1:3,19:27:56.70:2232,57,0	1/1:0,11:15:27.09:1028,27,0	1/1:6,26:34:96.33:3760,96,0	1/1:4,17:22:63.22:2583,63,0	1/1:6,30:43:99:4418,108,0	./.
chr10	22622399	.	T	TGG	6547.55	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=0.848;DP=464;FS=1.349;HRun=7;HaplotypeScore=74.4501;InbreedingCoeff=0.9343;MQ=81.16;MQ0=0;MQRankSum=-4.729;QD=15.70;ReadPosRankSum=3.360;VQSLOD=1.6652;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:48.13:0,48,559	1/1:3,0:13:22.46:79,22,0	0/0:20,0:20:48.10:0,48,532	0/0:7,0:7:15.03:0,15,172	1/1:4,0:31:68.12:251,68,0	1/1:4,0:27:54.77:193,55,0	1/1:1,0:7:12.48:44,12,0	1/1:4,15:19:45.10:654,45,0	1/1:2,0:11:19.84:70,20,0	1/1:6,0:27:42.91:166,43,0	1/1:1,0:19:42.42:149,42,0	1/1:2,0:7:12.48:44,12,0	1/1:1,0:14:34.81:122,35,0	1/1:0,0:15:34.48:120,34,0	1/1:2,16:18:42.14:689,42,0	1/1:5,17:22:48.16:785,48,0	1/1:0,0:12:29.94:105,30,0	1/1:0,0:10:25.36:94,25,0	1/1:1,0:17:40.27:145,40,0	1/1:3,0:18:37.43:132,37,0	1/1:0,0:15:30.35:113,30,0	1/1:3,0:7:9.98:35,10,0	1/1:1,0:20:42.30:149,42,0	1/1:0,0:14:25.96:94,26,0	1/1:0,0:13:24.95:88,25,0	1/1:6,21:27:57.15:897,57,0	1/1:6,24:30:72.25:1180,72,0	1/1:0,4:4:9.03:148,9,0
chr10	22623516	.	AG	A	295.06	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=1.053;DP=595;FS=2.699;HRun=2;HaplotypeScore=82.9306;InbreedingCoeff=0.9418;MQ=81.97;MQ0=0;MQRankSum=-3.448;QD=24.59;ReadPosRankSum=1.954;VQSLOD=3.4995;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,12:12:30.10:389,30,0	0/0:3,0:3:9.02:0,9,115	0/0:17,0:17:48.12:0,48,651	0/0:15,0:15:42.11:0,42,595	0/0:23,0:23:66.21:0,66,968	0/0:30,0:30:90.29:0,90,1308	0/0:20,0:20:51.17:0,51,764	0/0:28,0:27:75.24:0,75,1088	0/0:13,0:13:39.13:0,39,584	0/0:28,0:28:81.27:0,81,1214	0/0:24,0:24:72.07:0,72,1046	0/0:22,0:22:66.21:0,66,967	0/0:32,0:32:96.33:0,96,1439	0/0:20,0:20:60.19:0,60,875	0/0:29,0:29:81.26:0,81,1193	0/0:30,0:30:87.29:0,87,1284	0/0:8,0:8:24.08:0,24,360	0/0:11,0:11:30.10:0,30,429	0/0:16,0:16:48.13:0,48,677	0/0:21,0:21:63.20:0,63,924	0/0:19,0:19:57.18:0,57,833	0/0:20,0:20:60.20:0,60,896	0/0:34,0:34:96.30:0,96,1396	0/0:15,0:15:45.15:0,45,674	0/0:31,0:31:90.30:0,90,1347	0/0:29,0:29:87.28:0,87,1282	0/0:34,0:34:99:0,102,1513	0/0:11,0:11:30.10:0,30,450
chr10	22623861	.	GA	G	1867.46	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-1.498;DP=668;FS=5.318;HRun=1;HaplotypeScore=128.5534;InbreedingCoeff=0.9495;MQ=69.02;MQ0=1;MQRankSum=-1.906;QD=33.95;ReadPosRankSum=1.179;VQSLOD=3.1643;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,1:28:48.04:0,48,406	0/0:3,0:3:8.89:0,9,61	0/0:34,0:32:92.94:0,93,1264	0/0:12,0:11:29.75:0,30,373	0/0:35,1:36:80.41:0,80,658	0/0:27,0:27:73.73:0,74,530	0/0:33,0:33:88.76:0,89,665	0/0:29,0:29:72.75:0,73,643	0/0:27,0:27:76.84:0,77,557	0/0:30,0:30:71.79:0,72,695	0/0:10,0:9:25.52:0,26,166	0/0:27,0:27:64.89:0,65,584	0/0:32,1:33:64.07:0,64,564	0/0:27,2:29:22.22:0,22,413	0/0:32,0:32:91.61:0,92,678	0/0:27,0:27:74.29:0,74,553	0/0:13,0:13:35.35:0,35,227	0/0:7,0:7:14.14:0,14,82	0/0:24,0:24:57.45:0,57,530	0/0:31,1:32:67.83:0,68,585	0/0:18,0:18:52.50:0,52,341	0/0:15,0:15:44.35:0,44,333	0/0:45,1:45:99:0,99,836	0/0:16,0:16:47.13:0,47,328	0/0:25,0:25:61.31:0,61,558	1/1:0,25:25:75.23:987,75,0	1/1:2,23:25:71.32:894,71,0	1/1:0,5:5:9.03:124,9,0
chr10	22623865	.	GA	G	14738.19	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-9.674;DP=657;FS=11.365;HRun=7;HaplotypeScore=81.4477;InbreedingCoeff=0.9504;MQ=70.59;MQ0=1;MQRankSum=-2.642;QD=26.56;ReadPosRankSum=3.139;VQSLOD=4.9255;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,26:30:72.11:719,72,0	1/1:0,2:2:6.01:61,6,0	0/0:31,1:30:20.16:0,20,767	0/0:14,0:13:27.70:0,28,350	1/1:2,31:33:93.21:947,93,0	1/1:2,26:28:69.15:704,69,0	1/1:2,31:33:81.18:826,81,0	1/1:3,26:29:78.09:768,78,0	1/1:2,25:27:72.16:734,72,0	1/1:1,29:30:87.18:880,87,0	1/1:0,9:9:27.06:275,27,0	1/1:3,23:26:69.15:701,69,0	1/1:4,27:31:78.17:794,78,0	1/1:5,24:29:75.17:762,75,0	1/1:2,30:32:84.19:857,84,0	1/1:1,26:27:69.16:704,69,0	1/1:1,12:13:35.85:367,36,0	1/1:1,5:6:12.03:123,12,0	1/1:3,20:23:60.11:600,60,0	1/1:3,28:31:81.14:813,81,0	1/1:0,18:18:54.12:551,54,0	1/1:1,13:14:39.09:398,39,0	1/1:6,37:42:99:1070,105,0	1/1:1,16:17:45.10:459,45,0	1/1:4,20:24:62.98:626,63,0	0/0:25,0:25:61.44:0,61,300	0/0:25,0:26:64.97:0,65,289	0/0:5,0:5:7.95:0,8,33
chr10	22624595	.	AAGAGAG	A	170.74	PASS	AC=6;AF=0.115;AN=52;BaseQRankSum=3.225;DP=552;FS=34.346;HRun=0;HaplotypeScore=113.2004;InbreedingCoeff=0.6416;MQ=68.87;MQ0=12;MQRankSum=-3.966;QD=3.71;ReadPosRankSum=-1.127;VQSLOD=0.5722;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:25:9.44:0,9,106	0/0:8,0:8:6.02:0,6,105	./.	./.	0/0:23,0:23:18.06:0,18,447	0/0:19,0:19:30.09:0,30,670	0/0:11,0:11:11.26:0,11,284	0/0:29,0:28:11.65:0,12,139	1/1:7,2:9:6.02:120,6,0	0/0:23,0:23:23.10:0,23,326	0/0:17,0:17:20.96:0,21,355	0/0:16,0:16:18.06:0,18,509	0/0:23,0:23:21.07:0,21,519	0/0:25,0:24:33.09:0,33,689	1/1:14,5:20:6.02:102,6,0	1/1:15,2:17:3.01:60,3,0	0/0:13,0:16:12.04:0,12,302	0/0:13,0:13:25.64:0,26,591	0/0:18,0:18:9.03:0,9,147	0/0:27,0:27:27.08:0,27,623	0/0:10,0:10:6.02:0,6,128	0/0:18,0:18:18.06:0,18,393	0/0:15,0:15:18.06:0,18,442	0/0:10,0:13:12.04:0,12,265	0/0:14,0:14:15.05:0,15,405	0/0:17,0:19:20.08:0,20,353	0/0:30,0:26:23.11:0,23,502	0/0:8,0:8:3.01:0,3,67
chr10	22625147	.	ATG	A	7153.02	PASS	AB=0.958;AC=51;AF=0.911;AN=56;BaseQRankSum=3.104;DP=489;FS=0.000;HRun=0;HaplotypeScore=115.6331;InbreedingCoeff=0.4600;MQ=66.19;MQ0=7;MQRankSum=-1.322;QD=15.55;ReadPosRankSum=2.823;VQSLOD=4.7735;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:19:17.82:109,18,0	1/1:2,8:10:27.05:295,27,0	1/1:30,0:18:2.94:18,3,0	0/0:14,0:10:2.97:0,3,20	1/1:9,13:25:53.77:544,54,0	1/1:14,8:22:39.11:444,39,0	1/1:6,2:8:9.01:92,9,0	1/1:18,0:30:4.78:63,5,0	1/1:7,4:11:15.03:161,15,0	0/1:22,1:23:27.36:27,0,450	0/0:13,2:15:4.92:0,5,472	1/1:8,13:22:27.03:524,27,0	1/1:4,9:13:33:347,33,0	1/1:4,9:14:29.92:322,30,0	1/1:5,7:11:24.05:263,24,0	1/1:8,6:15:29.89:302,30,0	1/1:11,12:24:25:424,25,0	1/1:7,5:12:18.05:205,18,0	1/1:17,2:21:20.68:184,21,0	1/1:9,16:25:57.15:639,57,0	1/1:9,8:17:12.09:310,12,0	1/1:4,4:8:9.03:103,9,0	1/1:5,8:13:24.07:273,24,0	1/1:9,3:13:11.86:117,12,0	1/1:9,16:25:57.16:648,57,0	1/1:17,8:26:26.43:409,26,0	1/1:5,5:11:23.91:229,24,0	1/1:5,4:9:9.02:103,9,0
chr10	22625205	.	A	AT	11110.78	PASS	AB=1.000;AC=53;AF=0.946;AN=56;BaseQRankSum=-3.722;DP=389;FS=0.000;HRun=5;HaplotypeScore=61.4712;InbreedingCoeff=0.5646;MQ=61.76;MQ0=3;MQRankSum=-1.167;QD=30.11;ReadPosRankSum=2.519;VQSLOD=5.3905;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,20:21:39.13:513,39,0	1/1:2,6:8:18.06:237,18,0	0/1:13,0:7:3.22:3,0,77	0/0:19,0:8:10.51:0,11,80	1/1:6,23:29:72.23:937,72,0	1/1:0,19:19:54.17:701,54,0	1/1:0,2:2:3.01:39,3,0	1/1:3,23:26:66.19:842,66,0	1/1:0,5:5:15.05:197,15,0	1/1:3,13:16:42.14:548,42,0	1/1:3,13:16:36.12:474,36,0	1/1:3,10:13:27.09:355,27,0	1/1:0,9:9:27.09:350,27,0	1/1:2,8:10:21.07:276,21,0	1/1:1,13:14:33.11:434,33,0	1/1:0,13:13:36.12:474,36,0	1/1:3,25:28:55.06:709,55,0	1/1:4,6:10:19.75:252,20,0	1/1:1,9:10:27.09:354,27,0	1/1:2,15:17:45.14:571,45,0	1/1:2,5:7:12.04:158,12,0	1/1:2,0:2:6.01:64,6,0	1/1:2,6:8:15.05:197,15,0	1/1:1,3:4:9.03:116,9,0	1/1:3,28:31:72.22:931,72,0	1/1:1,13:14:39.13:512,39,0	1/1:0,21:21:57.19:750,57,0	1/1:0,3:3:9.03:118,9,0
chr10	22625710	.	GTA	G	11907.63	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-2.083;DP=654;FS=10.648;HRun=0;HaplotypeScore=88.4115;InbreedingCoeff=0.6847;MQ=38.37;MQ0=21;MQRankSum=0.808;QD=18.93;ReadPosRankSum=0.244;VQSLOD=3.9921;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,28:33:48.15:608,48,0	1/1:0,18:18:32.91:420,33,0	0/0:14,0:4:1.91:0,2,81	0/0:10,1:2:6.02:0,6,79	1/1:6,23:27:21.07:267,21,0	1/1:4,26:28:42.13:534,42,0	1/1:6,11:17:21.07:264,21,0	1/1:10,14:16:27.08:339,27,0	1/1:2,31:30:66.21:840,66,0	1/1:4,28:30:77.89:942,78,0	1/1:6,13:19:30.10:381,30,0	1/1:1,24:23:42.13:534,42,0	1/1:5,21:25:39.12:496,39,0	1/1:0,25:25:54.17:681,54,0	1/1:4,27:30:42.13:535,42,0	1/1:3,25:26:51.16:649,51,0	1/1:8,13:20:29.68:353,30,0	1/1:4,20:23:51.16:648,51,0	1/1:12,9:13:24.08:305,24,0	1/1:2,24:26:33.03:420,33,0	1/1:2,9:9:6.02:76,6,0	1/1:1,21:21:23.70:305,24,0	1/1:6,19:22:24.07:300,24,0	1/1:3,13:16:21.07:267,21,0	1/1:4,14:18:18.06:229,18,0	1/1:11,22:28:3.95:583,4,0	1/1:6,27:26:60.19:763,60,0	1/1:0,5:6:14.88:166,15,0
chr10	22628830	.	A	AT	2304.43	PASS	AB=0.943;AC=9;AF=0.161;AN=56;BaseQRankSum=-10.276;DP=563;FS=3.365;HRun=1;HaplotypeScore=103.8541;InbreedingCoeff=0.6753;MQ=76.54;MQ0=0;MQRankSum=-1.461;QD=20.58;ReadPosRankSum=-3.687;VQSLOD=2.7596;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:36.87:0,37,216	0/1:7,0:7:1.70:2,0,68	0/0:15,0:15:38.99:0,39,481	0/0:8,0:8:14.50:0,15,135	0/0:32,3:35:21.22:0,21,417	0/0:18,0:18:42.99:0,43,228	0/0:19,0:19:11.64:0,12,186	1/1:7,32:39:94.99:1102,95,0	0/0:14,0:14:13.59:0,14,166	0/0:33,0:33:59.33:0,59,380	0/0:27,0:27:64.19:0,64,318	0/0:20,0:20:50.22:0,50,258	0/0:19,0:19:42.77:0,43,228	0/0:15,0:15:38.59:0,39,187	1/1:1,20:21:60.18:713,60,0	1/1:7,16:23:32.96:617,33,0	0/0:16,0:16:46.08:0,46,241	0/1:8,1:9:18.64:19,0,71	0/0:19,0:19:33.69:0,34,174	0/0:28,0:28:63.70:0,64,334	0/1:12,1:13:0.98:1,0,129	0/0:17,0:17:43.47:0,43,221	0/0:20,0:20:49:0,49,265	0/0:13,0:13:34.84:0,35,176	0/0:27,0:27:76.48:0,76,372	0/0:23,0:23:51.62:0,52,261	0/0:37,0:36:91.09:0,91,487	0/0:8,0:8:23.15:0,23,126
chr10	22631489	.	CT	C	11290.49	PASS	AB=0.785;AC=53;AF=0.946;AN=56;BaseQRankSum=-2.586;DP=560;FS=4.313;HRun=10;HaplotypeScore=59.0412;InbreedingCoeff=0.0028;MQ=67.42;MQ0=0;MQRankSum=-2.653;QD=20.16;ReadPosRankSum=3.277;VQSLOD=5.8638;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,20:21:47.99:417,48,0	1/1:0,10:10:29.99:260,30,0	0/1:8,1:9:7.94:8,0,124	0/1:12,2:12:21.44:21,0,149	1/1:4,28:32:53.67:627,54,0	1/1:3,21:24:59.98:521,60,0	1/1:2,14:16:35.99:313,36,0	1/1:6,15:21:41.93:354,42,0	1/1:1,18:19:53.99:468,54,0	1/1:4,19:23:3.06:435,3,0	1/1:3,20:23:56.98:495,57,0	1/1:1,17:18:50.99:443,51,0	1/1:1,18:19:44.91:390,45,0	1/1:4,21:25:59.98:521,60,0	1/1:3,17:20:44.98:391,45,0	1/1:0,18:18:50.99:443,51,0	0/1:6,16:22:42.55:360,0,43	1/1:2,20:22:56.99:494,57,0	1/1:3,12:15:6.03:277,6,0	1/1:4,27:31:50.80:670,51,0	1/1:2,12:14:32.99:287,33,0	1/1:4,13:17:5.84:279,6,0	1/1:1,22:23:62.99:547,63,0	1/1:2,11:13:16.22:267,16,0	1/1:4,23:27:62.98:547,63,0	1/1:4,21:25:62.98:547,63,0	1/1:4,31:35:92.97:807,93,0	1/1:0,4:4:12:104,12,0
chr10	22632530	.	CA	C	1972.45	PASS	AB=0.888;AC=25;AF=0.446;AN=56;BaseQRankSum=-2.941;DP=461;FS=0.968;HRun=13;HaplotypeScore=74.0393;InbreedingCoeff=0.6763;MQ=69.94;MQ0=0;MQRankSum=0.324;QD=9.13;ReadPosRankSum=4.977;VQSLOD=3.0532;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:21,3:24:4.83:5,0,263	0/1:0,0:4:1.27:1,0,9	0/1:10,0:10:8.65:9,0,87	0/0:7,0:8:3.68:0,4,40	1/1:8,14:22:6.09:211,6,0	1/1:3,15:21:42.76:290,43,0	1/1:1,8:10:12.49:161,12,0	0/0:20,1:24:38.87:0,39,351	0/0:11,0:11:27.03:0,27,161	1/1:3,12:15:32.73:240,33,0	1/1:4,7:10:14.84:109,15,0	1/1:8,8:16:14.93:200,15,0	1/1:5,8:14:25.80:179,26,0	0/1:9,7:16:0.43:129,0,0	0/0:6,0:29:40.36:0,40,248	0/0:2,0:13:22.89:0,23,129	0/0:3,0:19:20.04:0,20,110	0/0:3,0:11:8.64:0,9,48	0/0:8,0:23:36.96:0,37,223	0/0:5,0:27:46.53:0,47,261	0/0:1,0:8:11.42:0,11,59	1/1:3,10:13:23.78:174,24,0	1/1:2,12:15:31.80:224,32,0	0/1:5,1:6:12.91:13,0,44	1/1:5,13:19:22.79:231,23,0	0/0:21,1:22:26.15:0,26,406	0/0:32,1:33:53.89:0,54,622	0/0:17,0:17:48.02:0,48,444
chr10	22632780	.	A	AACACACACACAC	10955.91	PASS	AC=50;AF=0.926;AN=54;BaseQRankSum=0.062;DP=508;FS=3.066;HRun=0;HaplotypeScore=199.0312;InbreedingCoeff=0.5221;MQ=53.64;MQ0=3;MQRankSum=-1.803;QD=24.29;ReadPosRankSum=0.940;VQSLOD=4.0536;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:20:17.97:550,18,0	./.	0/0:19,0:14:3.09:0,3,220	0/0:31,0:21:17.96:0,18,354	1/1:19,0:18:9.02:250,9,0	1/1:26,0:26:12.04:254,12,0	1/1:16,0:15:5.99:130,6,0	1/1:32,0:31:36.10:878,36,0	1/1:17,0:17:15.01:474,15,0	1/1:16,0:16:35.63:465,36,0	1/1:17,0:15:3:168,3,0	1/1:11,0:11:9.03:310,9,0	1/1:19,0:18:24.08:1011,24,0	1/1:13,0:13:11.98:254,12,0	1/1:20,0:20:6.02:296,6,0	1/1:4,10:14:6.02:332,6,0	1/1:19,0:18:18.06:791,18,0	1/1:16,0:16:20.04:678,20,0	1/1:10,0:9:12.04:216,12,0	1/1:9,10:21:9.03:488,9,0	1/1:12,0:12:3.01:120,3,0	1/1:18,0:18:6.48:74,6,0	1/1:16,0:16:0.47:1,0,0	1/1:15,0:15:15.05:448,15,0	1/1:32,0:30:21.07:788,21,0	1/1:10,0:23:48.13:1252,48,0	1/1:11,0:17:21.07:472,21,0	1/1:10,0:10:11.99:258,12,0
chr10	22634465	.	CGA	C	29006.93	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-4.752;DP=696;FS=0.687;HRun=0;HaplotypeScore=97.6885;InbreedingCoeff=0.9989;MQ=76.69;MQ0=2;MQRankSum=-8.770;QD=44.63;ReadPosRankSum=6.222;VQSLOD=6.2125;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,37:37:99:1713,105,0	1/1:0,9:9:27.09:441,27,0	0/0:19,0:19:36.31:0,36,841	0/0:24,0:26:38.79:0,39,640	1/1:0,21:21:63.22:1028,63,0	1/1:0,24:24:66.23:1077,66,0	1/1:0,16:16:39.13:636,39,0	1/1:0,31:31:93.29:1462,93,0	1/1:0,23:23:63.22:1028,63,0	1/1:0,36:36:99:1690,105,0	1/1:0,20:20:57.19:929,57,0	1/1:0,21:21:63.22:1028,63,0	1/1:0,28:27:78.27:1273,78,0	1/1:0,29:29:72.25:1175,72,0	1/1:0,34:34:87.30:1419,87,0	1/1:0,29:29:72.25:1175,72,0	1/1:1,31:31:84.29:1371,84,0	1/1:0,17:17:42.14:685,42,0	1/1:0,11:11:33.10:515,33,0	1/1:0,24:24:63.22:1028,63,0	1/1:0,32:32:84.29:1371,84,0	1/1:0,30:30:87.30:1419,87,0	1/1:0,25:25:57.19:930,57,0	1/1:0,26:26:72.25:1175,72,0	1/1:0,24:24:69.24:1126,69,0	1/1:0,34:34:99:1652,102,0	1/1:0,27:27:72.23:1174,72,0	1/1:0,10:10:30.10:489,30,0
chr10	22635709	.	GGGAAA	G	25354.66	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=3.480;DP=553;FS=6.864;HRun=0;HaplotypeScore=115.3070;InbreedingCoeff=0.9883;MQ=75.78;MQ0=0;MQRankSum=-8.245;QD=48.20;ReadPosRankSum=5.243;VQSLOD=4.8946;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,17:19:39.13:817,39,0	1/1:2,9:11:24.08:477,24,0	0/0:15,0:15:39.12:0,39,958	0/0:12,0:12:33.07:0,33,753	1/1:2,21:23:60.15:1160,60,0	1/1:3,22:25:57.20:1195,57,0	1/1:0,12:12:27.09:507,27,0	1/1:5,28:33:84.22:1536,84,0	1/1:0,35:35:90.31:1861,90,0	1/1:3,19:22:54.16:1047,54,0	1/1:2,21:23:54.18:1078,54,0	1/1:1,16:17:45.15:937,45,0	1/1:0,18:18:45.15:919,45,0	1/1:0,17:17:39.13:791,39,0	1/1:0,22:22:39.13:818,39,0	1/1:1,15:16:33.11:693,33,0	1/1:0,12:12:27.09:565,27,0	1/1:1,8:9:15.05:305,15,0	1/1:0,14:14:42.12:794,42,0	1/1:0,19:19:57.13:1150,57,0	1/1:2,15:17:42.14:829,42,0	1/1:3,21:24:57.11:1098,57,0	1/1:3,27:30:57.19:1165,57,0	1/1:3,15:18:36.12:755,36,0	1/1:1,22:23:63.21:1272,63,0	1/1:0,26:26:78.16:1456,78,0	1/1:3,30:33:78.05:1634,78,0	1/1:0,8:8:24.08:494,24,0
chr10	22635876	.	TA	T	6134.62	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=11.709;DP=540;FS=0.000;HRun=3;HaplotypeScore=51.6907;InbreedingCoeff=0.9981;MQ=77.99;MQ0=0;MQRankSum=-1.774;QD=34.08;ReadPosRankSum=0.106;VQSLOD=4.9304;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:36.11:0,36,499	1/1:0,11:11:33.10:409,33,0	0/0:9,0:9:26.51:0,27,313	0/0:16,0:16:47.96:0,48,636	0/0:26,0:26:75.23:0,75,1042	0/0:26,0:26:78.26:0,78,1123	0/0:11,0:11:33.11:0,33,474	1/1:0,32:32:96.26:1152,96,0	1/1:0,21:21:57.18:706,57,0	0/0:28,0:28:81.27:0,81,1166	0/0:28,0:28:84.27:0,84,1192	0/0:18,0:18:54.18:0,54,776	0/0:21,0:21:60.20:0,60,860	0/0:16,0:16:45.15:0,45,644	1/1:0,24:24:66.21:818,66,0	1/1:1,13:14:39.12:484,39,0	1/1:0,10:10:24.08:297,24,0	1/1:0,16:16:45.14:558,45,0	1/1:0,11:11:30.09:372,30,0	1/1:1,32:33:90.28:1116,90,0	1/1:1,7:8:18.06:223,18,0	0/0:18,0:18:51.17:0,51,734	0/0:25,0:25:75.25:0,75,1065	0/0:12,0:12:33.11:0,33,474	0/0:18,0:18:48.16:0,48,690	0/0:26,0:26:69.23:0,69,994	0/0:33,1:34:65.15:0,65,1386	0/0:15,0:15:44.64:0,45,612
chr10	22636374	.	AT	A	1444.48	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=4.621;DP=508;FS=9.754;HRun=7;HaplotypeScore=72.7534;InbreedingCoeff=0.9798;MQ=73.58;MQ0=0;MQRankSum=-0.039;QD=22.22;ReadPosRankSum=1.306;VQSLOD=3.3279;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:57.13:0,57,686	0/0:9,0:9:24.08:0,24,302	0/0:9,0:9:21.07:0,21,264	0/0:11,0:10:22.53:0,23,278	0/0:32,0:32:87.25:0,87,1068	0/0:21,0:21:57.18:0,57,717	0/0:11,0:11:24.08:0,24,302	0/0:29,0:29:75.22:0,75,921	0/0:8,0:8:24.08:0,24,302	0/0:34,0:34:96.31:0,96,1207	0/0:18,0:18:54.17:0,54,673	0/0:10,0:10:21.07:0,21,261	0/0:16,0:16:42.13:0,42,528	0/0:17,0:17:51.15:0,51,629	0/0:12,0:12:33.09:0,33,402	0/0:16,0:16:48.15:0,48,604	0/0:21,0:21:57.17:0,57,702	0/0:9,0:9:27.09:0,27,339	0/0:20,0:20:51.16:0,51,636	0/0:22,0:22:63.20:0,63,793	0/0:9,0:9:21.07:0,21,264	0/0:21,0:21:54.14:0,54,663	0/0:24,0:24:69.21:0,69,853	0/0:18,0:18:54.16:0,54,662	0/0:26,0:26:72.22:0,72,893	1/1:3,20:23:22.38:543,22,0	1/1:2,32:34:90.20:918,90,0	1/1:0,8:8:12.03:122,12,0
chr10	22637457	.	GA	G	6511.42	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=14.206;DP=622;FS=12.958;HRun=7;HaplotypeScore=63.1233;InbreedingCoeff=0.9872;MQ=74.14;MQ0=1;MQRankSum=-0.275;QD=25.53;ReadPosRankSum=2.993;VQSLOD=4.5587;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:96.29:0,96,1193	0/0:6,0:6:18.06:0,18,226	0/0:27,1:17:10.39:0,10,300	0/0:27,1:17:25.02:0,25,257	1/1:2,32:34:87.19:885,87,0	1/1:2,23:25:69.15:704,69,0	1/1:1,15:16:39.09:398,39,0	0/0:31,0:31:84.27:0,84,1055	0/0:14,0:14:36.12:0,36,453	1/1:3,25:28:72.16:733,72,0	1/1:0,26:26:75.17:764,75,0	1/1:2,9:11:27.06:275,27,0	1/1:2,12:14:33.07:337,33,0	1/1:3,21:24:48.10:490,48,0	0/0:19,0:19:48.15:0,48,602	0/0:24,0:24:72.21:0,72,881	0/0:28,0:28:69.19:0,69,852	0/0:4,0:4:12:0,12,134	0/0:27,0:27:81.26:0,81,1019	0/0:27,0:27:69.22:0,69,866	0/0:13,0:13:36.10:0,36,439	1/1:1,22:23:63.14:643,63,0	1/1:2,18:20:51.11:520,51,0	1/1:0,10:10:27.06:275,27,0	1/1:2,22:24:20.15:486,20,0	0/0:32,0:32:84.27:0,84,1057	0/0:31,0:31:87.26:0,87,1079	0/0:21,0:21:63.20:0,63,791
chr10	22639179	.	C	CA	4228.09	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-4.531;DP=523;FS=2.886;HRun=9;HaplotypeScore=89.8810;InbreedingCoeff=0.9712;MQ=63.33;MQ0=3;MQRankSum=-0.377;QD=23.62;ReadPosRankSum=1.089;VQSLOD=5.4382;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:83.89:0,84,722	1/1:2,5:7:15.04:166,15,0	0/0:10,0:8:23.87:0,24,196	0/0:6,0:4:6.45:0,6,54	0/0:39,0:38:95.74:0,96,813	0/0:27,0:27:74.95:0,75,643	0/0:13,0:13:32.99:0,33,286	0/0:21,0:21:47.92:0,48,410	1/1:3,9:12:27.07:299,27,0	0/0:17,0:17:38.99:0,39,338	0/0:26,0:26:65.96:0,66,570	0/0:9,0:9:20.98:0,21,182	0/0:16,0:16:32.95:0,33,283	0/0:18,0:18:44.98:0,45,389	0/0:14,0:14:26.98:0,27,234	0/0:21,0:21:47.97:0,48,417	1/1:2,12:13:30.08:332,30,0	1/1:3,12:15:33.09:365,33,0	1/1:5,14:19:42.09:453,42,0	1/1:4,22:26:36.98:601,37,0	1/1:1,15:16:36.10:398,36,0	0/0:15,0:15:32.98:0,33,286	0/0:19,0:19:32.96:0,33,286	0/0:12,0:12:35.99:0,36,312	0/0:24,0:24:65.86:0,66,551	1/1:5,18:23:8.10:523,8,0	1/1:2,26:28:69.18:760,69,0	1/1:3,16:19:30.08:332,30,0
chr10	22639891	.	CA	C	6147.34	PASS	AB=0.610;AC=50;AF=0.962;AN=52;BaseQRankSum=-1.467;DP=456;FS=5.305;HRun=3;HaplotypeScore=34.4666;InbreedingCoeff=-0.0637;MQ=29.51;MQ0=144;MQRankSum=0.571;QD=14.20;ReadPosRankSum=1.626;VQSLOD=3.6654;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,34:25:36.11:443,36,0	0/1:2,5:4:30.71:99,0,31	./.	./.	1/1:7,11:11:15.04:185,15,0	1/1:0,16:14:36.11:445,36,0	1/1:1,8:4:9.03:111,9,0	1/1:7,3:1:3:27,3,0	1/1:0,11:6:18.06:222,18,0	1/1:3,17:12:36.11:445,36,0	1/1:2,9:9:18.06:223,18,0	1/1:2,16:12:27.08:334,27,0	1/1:3,16:13:33.10:406,33,0	1/1:2,20:16:36.11:445,36,0	1/1:1,15:10:24.03:277,24,0	1/1:0,13:9:17.93:223,18,0	1/1:5,23:14:6.02:74,6,0	1/1:5,9:4:6.02:74,6,0	1/1:4,10:8:24.08:297,24,0	1/1:2,6:5:15.05:185,15,0	1/1:18,30:10:6.02:74,6,0	0/1:3,4:3:9.95:65,0,10	1/1:0,10:9:18.06:222,18,0	1/1:7,13:12:17.99:204,18,0	1/1:2,10:9:18.06:223,18,0	1/1:6,19:12:33.09:397,33,0	1/1:2,9:8:21.07:260,21,0	1/1:2,6:5:15.05:186,15,0
chr10	22679261	.	GA	G	3713.31	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=15.654;DP=586;FS=4.620;HRun=7;HaplotypeScore=80.9749;InbreedingCoeff=0.9901;MQ=86.07;MQ0=0;MQRankSum=-0.261;QD=27.10;ReadPosRankSum=3.158;VQSLOD=4.4546;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,138,1664	1/1:0,6:6:17.99:172,18,0	0/0:23,0:23:54:0,54,638	0/0:17,0:17:13.64:0,14,269	0/0:19,0:19:45.14:0,45,566	0/0:19,0:19:54.17:0,54,679	0/0:15,0:15:42.13:0,42,528	0/0:19,0:19:45.14:0,45,566	1/1:1,20:21:54.12:551,54,0	0/0:23,0:23:66.21:0,66,821	0/0:13,0:13:36.12:0,36,453	0/0:30,0:30:84.26:0,84,1043	0/0:29,0:29:81.26:0,81,1019	0/0:23,0:23:69.22:0,69,868	0/0:18,0:18:54.17:0,54,679	0/0:18,0:18:51.14:0,51,627	1/1:3,16:19:48.11:490,48,0	1/1:0,6:6:18.04:184,18,0	1/1:2,14:16:42.09:423,42,0	1/1:2,34:36:88.45:915,88,0	1/1:1,32:33:96.22:979,96,0	0/0:17,0:17:39.12:0,39,491	0/0:19,0:19:42.11:0,42,502	0/0:18,0:18:48.14:0,48,591	0/0:12,0:12:33:0,33,415	0/0:33,0:33:93.29:0,93,1161	0/0:30,0:29:78.24:0,78,969	0/0:7,0:7:15.03:0,15,175
chr10	22679411	.	TA	T	1201.86	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=3.978;DP=568;FS=4.414;HRun=2;HaplotypeScore=72.7685;InbreedingCoeff=0.9944;MQ=79.08;MQ0=0;MQRankSum=0.265;QD=30.05;ReadPosRankSum=-0.304;VQSLOD=3.0040;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,129,1891	0/0:9,0:9:24.08:0,24,352	0/0:24,0:23:66.21:0,66,957	0/0:16,0:16:48.15:0,48,691	0/0:14,0:14:39.11:0,39,562	0/0:23,0:22:48.15:0,48,699	0/0:23,0:23:57.19:0,57,853	0/0:22,0:22:63.16:0,63,899	0/0:15,0:15:45.15:0,45,673	0/0:28,0:28:78.25:0,78,1148	0/0:15,0:15:33.09:0,33,490	0/0:24,0:24:59.91:0,60,898	0/0:19,0:19:54.18:0,54,804	0/0:24,0:24:48.08:0,48,718	1/1:0,21:21:54.18:701,54,0	1/1:0,19:19:48.16:623,48,0	0/0:25,0:25:72.18:0,72,1051	0/0:6,0:6:18.06:0,18,270	0/0:15,0:14:40.85:0,41,621	0/0:15,0:15:36.11:0,36,515	0/0:32,0:32:93.29:0,93,1351	0/0:15,0:15:39.10:0,39,559	0/0:22,0:22:57.19:0,57,854	0/0:17,0:17:48.16:0,48,714	0/0:12,0:12:36.12:0,36,539	0/0:23,0:23:69.23:0,69,1034	0/0:21,0:20:54.08:0,54,761	0/0:14,0:14:42.14:0,42,629
chr10	22682097	.	TAAAG	T	4507.49	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=11.527;DP=637;FS=25.371;HRun=0;HaplotypeScore=104.8013;InbreedingCoeff=0.9954;MQ=50.25;MQ0=99;MQRankSum=-3.699;QD=36.95;ReadPosRankSum=4.174;VQSLOD=3.1618;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:22:63.21:0,63,1549	0/0:11,0:9:27.09:0,27,663	0/0:27,0:20:57.18:0,57,1324	0/0:16,0:11:33.05:0,33,641	1/1:5,14:16:33.11:572,33,0	0/0:18,0:16:48.16:0,48,1210	0/0:18,0:11:24.08:0,24,623	0/0:30,0:25:69.07:0,69,1388	0/0:29,0:23:66.23:0,66,1662	1/1:5,10:12:33.06:558,33,0	1/1:4,16:17:42.06:690,42,0	0/0:15,0:14:39.13:0,39,1007	0/0:22,0:19:54.18:0,54,1307	0/0:36,0:32:96.19:0,96,2285	0/0:31,0:22:63.22:0,63,1633	0/0:22,0:18:51.18:0,51,1304	0/0:13,0:10:30.10:0,30,738	0/0:8,0:6:15.05:0,15,389	0/0:22,0:14:42.12:0,42,959	0/0:34,0:29:78.24:0,78,1868	0/0:13,0:13:36.04:0,36,822	0/0:34,0:30:75.11:0,75,1683	0/0:33,0:29:75.24:0,75,1892	0/0:28,0:25:60.21:0,60,1526	0/0:27,0:22:63.22:0,63,1594	1/1:5,19:21:60.16:1037,60,0	1/1:8,26:27:69.24:1239,69,0	1/1:2,8:9:24.08:412,24,0
chr10	22682189	.	G	GT	8584.90	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=11.966;DP=584;FS=1.031;HRun=3;HaplotypeScore=77.1179;InbreedingCoeff=0.9999;MQ=87.89;MQ0=0;MQRankSum=-5.036;QD=38.33;ReadPosRankSum=0.479;VQSLOD=4.8779;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,28:28:75.25:1049,75,0	0/0:16,0:16:48.15:0,48,574	0/0:23,0:23:56.95:0,57,651	0/0:24,0:24:63.05:0,63,721	1/1:4,14:18:48.06:611,48,0	0/0:19,0:19:51.16:0,51,611	0/0:17,0:17:51.14:0,51,597	1/1:0,29:29:87.28:1200,87,0	0/0:27,0:27:72.20:0,72,850	1/1:1,20:21:54.16:736,54,0	1/1:3,14:17:42.10:566,42,0	0/0:22,0:22:63.19:0,63,755	0/0:18,0:18:51.16:0,51,610	0/0:15,0:15:45.14:0,45,539	1/1:0,19:19:54.18:755,54,0	1/1:1,21:22:60.20:840,60,0	0/0:21,0:21:54.14:0,54,634	0/0:10,0:10:30.09:0,30,359	0/0:14,0:14:36.11:0,36,432	0/0:27,0:27:72.21:0,72,852	0/0:23,0:23:66.20:0,66,792	0/0:20,0:20:48.15:0,48,576	0/0:15,0:15:45.14:0,45,539	0/0:28,0:28:84.26:0,84,1008	0/0:21,0:21:60.18:0,60,719	1/1:1,13:14:42.13:566,42,0	1/1:0,33:33:99:1385,99,0	1/1:2,21:23:63.21:877,63,0
chr10	22683161	.	G	GGT	6242.85	PASS	AB=0.692;AC=31;AF=0.554;AN=56;BaseQRankSum=5.453;DP=427;FS=35.534;HRun=0;HaplotypeScore=88.1555;InbreedingCoeff=0.8356;MQ=67.91;MQ0=7;MQRankSum=-9.528;QD=27.99;ReadPosRankSum=-1.508;VQSLOD=2.8512;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,4:9:12.04:199,12,0	1/1:1,3:4:12.04:186,12,0	0/0:23,0:19:16.83:0,17,150	0/0:21,0:15:29.96:0,30,367	1/1:10,14:24:35.74:533,36,0	0/0:26,0:26:75.03:0,75,921	0/0:19,0:19:51.15:0,51,625	1/1:14,27:41:84.05:1278,84,0	1/1:5,2:6:5.85:99,6,0	1/1:9,20:28:60.10:956,60,0	1/1:1,8:9:12.04:199,12,0	0/0:10,0:10:24.08:0,24,303	0/0:17,0:17:45.14:0,45,566	0/0:15,0:15:42.12:0,42,516	0/1:5,4:9:21.83:185,0,22	1/1:2,1:3:6.02:99,6,0	1/1:2,5:7:12.04:199,12,0	0/0:3,2:5:3.01:0,3,38	1/1:5,5:10:21.04:302,21,0	1/1:3,19:20:43.40:743,43,0	1/1:2,4:5:6.02:100,6,0	0/0:17,0:18:54.14:0,54,665	0/0:24,0:24:69.22:0,69,869	0/0:8,0:8:24.08:0,24,303	0/0:18,0:18:24:0,24,518	1/1:6,16:22:42.10:666,42,0	1/1:2,12:13:18.06:298,18,0	1/1:2,5:7:12.04:199,12,0
chr10	22683205	.	T	TA	3852.29	PASS	AB=0.978;AC=23;AF=0.426;AN=54;BaseQRankSum=13.368;DP=522;FS=28.056;HRun=1;HaplotypeScore=231.0728;InbreedingCoeff=0.4652;MQ=64.08;MQ0=4;MQRankSum=-11.769;QD=13.61;ReadPosRankSum=0.140;VQSLOD=0.6189;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,2:13:23.99:260,24,0	0/1:8,0:8:22:144,0,22	0/0:22,0:17:39.12:0,39,500	0/0:27,0:17:40.99:0,41,509	0/1:32,1:33:33.26:226,0,33	0/0:30,0:30:84.27:0,84,1090	0/0:20,0:20:60.19:0,60,779	0/1:25,1:26:99:307,0,183	1/1:8,1:9:14.76:184,15,0	0/1:30,0:30:99:415,0,182	1/1:23,0:23:41.60:521,42,0	0/0:17,0:17:51.17:0,51,662	0/0:23,0:23:63.16:0,63,774	0/0:17,0:17:48.14:0,48,609	1/1:11,1:12:26.18:285,26,0	0/1:9,1:9:0.20:103,0,0	1/1:11,0:11:9.22:118,9,0	./.	0/0:5,0:4:11.97:0,12,117	0/1:50,0:49:18.62:574,0,19	1/1:8,0:8:14.78:153,15,0	0/0:21,0:21:51.17:0,51,662	0/0:23,0:23:69.20:0,69,880	0/0:10,0:10:30.10:0,30,389	0/0:22,0:22:63.20:0,63,818	0/1:24,0:24:99:194,0,187	1/1:19,0:18:26.97:288,27,0	1/1:7,0:7:3.01:81,3,0
chr10	22683301	.	CT	C	8203.90	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=13.266;DP=552;FS=0.723;HRun=9;HaplotypeScore=62.1832;InbreedingCoeff=0.9779;MQ=62.00;MQ0=0;MQRankSum=-7.377;QD=22.92;ReadPosRankSum=-0.962;VQSLOD=5.2901;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,28:33:84.03:764,84,0	1/1:1,5:6:15.01:137,15,0	0/0:12,1:13:5.62:0,6,312	0/0:9,0:9:21.05:0,21,229	1/1:2,38:40:96.04:878,96,0	0/0:25,0:25:72.21:0,72,831	0/0:30,0:30:81.24:0,81,935	1/1:6,26:33:79.97:703,80,0	1/1:1,10:11:30.02:275,30,0	1/1:2,19:21:57.02:521,57,0	1/1:2,11:13:33.02:302,33,0	0/0:16,0:16:48.14:0,48,554	0/0:17,0:17:42.12:0,42,485	0/0:19,0:19:54.16:0,54,623	1/1:3,22:25:63.02:576,63,0	1/1:5,12:17:39:352,39,0	1/1:4,21:25:69:622,69,0	1/1:1,5:6:15.01:137,15,0	1/1:4,19:23:60.02:546,60,0	1/1:7,19:26:65.99:594,66,0	1/1:2,17:19:48.02:439,48,0	0/0:15,0:15:36.11:0,36,415	0/0:14,0:14:42.12:0,42,485	0/0:14,0:14:42.12:0,42,484	0/0:22,0:22:57.17:0,57,658	1/1:4,24:28:75.04:686,75,0	1/1:6,18:24:54:490,54,0	1/1:1,7:8:20.93:181,21,0
chr10	22683377	.	A	ACTG	18850.06	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=12.116;DP=596;FS=20.407;HRun=0;HaplotypeScore=98.0724;InbreedingCoeff=0.9737;MQ=84.83;MQ0=0;MQRankSum=-11.803;QD=52.51;ReadPosRankSum=0.598;VQSLOD=4.7957;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,39:46:99:2413,111,0	1/1:0,9:9:18.06:395,18,0	0/0:24,0:24:57.17:0,57,867	0/0:20,0:20:51.17:0,51,800	1/1:7,16:23:45.15:968,45,0	0/0:17,0:17:48.16:0,48,771	0/0:22,0:22:63.20:0,63,990	1/1:12,18:30:66.23:1385,66,0	1/1:0,17:17:48.16:1055,48,0	1/1:9,18:27:66.23:1409,66,0	1/1:3,13:18:48.16:1018,48,0	0/0:32,0:32:93.32:0,93,1493	0/0:19,0:19:57.18:0,57,892	0/0:23,0:23:66.23:0,66,1057	1/1:6,17:23:57.20:1201,57,0	1/1:3,9:11:27.09:593,27,0	1/1:3,18:22:57.20:1252,57,0	1/1:1,0:1:3.01:41,3,0	1/1:7,16:23:60.21:1294,60,0	1/1:3,21:23:66.23:1417,66,0	1/1:8,11:19:42.13:881,42,0	0/0:21,0:21:63.17:0,63,961	0/0:17,0:17:51.17:0,51,817	0/0:28,0:28:78.27:0,78,1254	0/0:14,0:14:42.14:0,42,673	1/1:3,16:20:51.17:1101,51,0	1/1:6,24:33:87.26:1832,87,0	1/1:2,10:12:27.09:594,27,0
chr10	22684537	.	AT	A	6394.49	PASS	AB=1.000;AC=36;AF=0.643;AN=56;BaseQRankSum=10.464;DP=460;FS=1.343;HRun=10;HaplotypeScore=48.4062;InbreedingCoeff=0.8520;MQ=74.45;MQ0=3;MQRankSum=-0.406;QD=19.44;ReadPosRankSum=0.252;VQSLOD=5.3553;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,21:27:59.98:521,60,0	1/1:1,11:12:29.99:260,30,0	0/1:13,0:8:16.52:17,0,27	0/1:18,0:10:3.38:3,0,34	1/1:4,13:18:38.01:318,38,0	0/0:20,0:20:57.15:0,57,630	0/0:18,0:18:42.11:0,42,464	1/1:3,21:24:62.96:543,63,0	1/1:2,11:13:23.99:208,24,0	1/1:3,16:19:47.99:417,48,0	1/1:3,19:22:56.98:495,57,0	0/0:4,0:4:6.02:0,6,66	0/0:10,0:10:27.07:0,27,298	0/0:22,0:22:57.14:0,57,619	1/1:2,17:19:47.99:417,48,0	1/1:2,7:9:18:156,18,0	1/1:2,23:25:65.97:573,66,0	1/1:1,18:19:44.98:391,45,0	1/1:2,15:17:47.96:413,48,0	1/1:4,21:25:62.98:547,63,0	1/1:0,6:6:18:156,18,0	0/0:14,0:14:33.08:0,33,360	0/0:15,0:15:39.10:0,39,424	0/0:11,0:11:21.06:0,21,232	0/0:17,0:17:45.12:0,45,498	1/1:4,13:17:41.96:359,42,0	1/1:1,14:15:38.99:339,39,0	1/1:0,11:11:29.99:260,30,0
chr10	22684644	.	T	TA	4080.85	PASS	AB=0.621;AC=29;AF=0.518;AN=56;BaseQRankSum=-0.031;DP=464;FS=4.399;HRun=11;HaplotypeScore=54.2275;InbreedingCoeff=0.8932;MQ=73.30;MQ0=0;MQRankSum=-1.147;QD=15.11;ReadPosRankSum=0.700;VQSLOD=4.1157;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,0:29:45.45:228,45,0	1/1:2,9:11:18.04:183,18,0	0/0:13,0:14:25.27:0,25,182	0/0:12,0:11:5.22:0,5,82	1/1:6,14:20:35.98:343,36,0	0/0:18,0:18:47.78:0,48,365	0/0:19,0:19:44.77:0,45,344	1/1:4,14:18:39:365,39,0	1/1:2,17:19:30.06:305,30,0	1/1:3,15:21:47.81:435,48,0	1/1:4,7:11:14.99:141,15,0	0/0:14,1:15:11.38:0,11,269	0/0:10,0:10:20.85:0,21,157	0/0:17,0:17:44.79:0,45,345	0/0:21,0:21:50.77:0,51,393	0/0:10,0:10:23.89:0,24,186	1/1:4,16:20:39.07:392,39,0	0/1:7,10:18:16.58:196,0,17	1/1:2,16:18:47.96:472,48,0	1/1:11,19:30:27.75:432,28,0	1/1:2,10:12:18.04:183,18,0	0/0:20,0:20:50.78:0,51,392	0/0:17,0:17:35.82:0,36,276	0/0:7,0:7:20.92:0,21,162	0/0:13,0:14:25.91:0,26,191	1/1:4,0:17:38.11:205,38,0	1/1:4,0:20:31.21:159,31,0	1/1:0,0:6:8.52:43,9,0
chr10	22685147	.	TAAGTTAATATA	T	3804	PASS	AC=6;AF=0.111;AN=54;BaseQRankSum=10.107;DP=463;FS=2.111;HRun=0;HaplotypeScore=151.4540;InbreedingCoeff=0.9674;MQ=66.12;MQ0=0;MQRankSum=-8.889;QD=48.15;ReadPosRankSum=4.025;VQSLOD=3.1757;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,15:24:21.07:690,21,0	0/0:8,0:8:24.08:0,24,1246	0/0:8,0:8:24.08:0,24,948	0/0:9,0:9:18.06:0,18,508	0/0:26,0:26:60.21:0,60,2934	0/0:19,0:19:48.16:0,48,2458	0/0:10,0:10:27.06:0,27,994	0/0:34,0:34:75.26:0,75,3598	0/0:24,0:24:66.21:0,66,3189	0/0:15,0:15:33.11:0,33,1449	0/0:19,0:19:45.15:0,45,2069	0/0:18,0:18:42.14:0,42,2309	0/0:13,0:13:27.08:0,27,1147	0/0:16,0:16:48.15:0,48,2245	0/0:15,0:15:42.13:0,42,2124	0/0:17,0:17:45.15:0,45,2286	0/0:23,0:23:42.12:0,42,2140	0/0:10,0:10:24.03:0,24,889	0/0:15,0:15:39.11:0,39,1515	0/0:25,0:25:66.23:0,66,3421	0/0:7,0:7:18.06:0,18,888	0/0:5,0:5:9.03:0,9,499	0/0:11,0:11:24.07:0,24,1104	0/0:9,0:9:21.07:0,21,917	0/0:26,0:26:66.23:0,66,3169	1/1:5,21:26:63.21:1913,63,0	1/1:11,18:29:36.12:1201,36,0	./.
chr10	22685419	.	T	TAC	2055.49	PASS	AB=0.813;AC=25;AF=0.481;AN=52;BaseQRankSum=-5.618;DP=518;FS=26.626;HRun=0;HaplotypeScore=97.5406;InbreedingCoeff=0.2046;MQ=59.42;MQ0=11;MQRankSum=4.655;QD=6.46;ReadPosRankSum=-1.399;VQSLOD=1.3703;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:30:30.32:30,0,66	0/0:2,0:6:5.68:0,6,28	./.	./.	1/1:28,0:27:20.98:184,21,0	0/1:14,11:25:13.55:207,0,14	1/1:6,6:12:18.06:268,18,0	1/1:17,0:15:5.88:55,6,0	0/0:5,0:13:16.70:0,17,78	1/1:16,0:16:19.93:163,20,0	1/1:13,0:13:17.59:140,18,0	1/1:7,6:13:6.02:90,6,0	0/1:8,4:13:1.28:121,0,1	0/0:17,0:17:18.01:0,18,184	0/0:13,0:32:29.29:0,29,141	0/0:10,0:20:23.57:0,24,113	0/0:6,0:12:11.36:0,11,56	0/1:16,0:19:8.45:8,0,16	0/0:11,0:15:14.16:0,14,69	0/0:9,0:23:19.62:0,20,89	0/0:10,0:18:2.84:0,3,14	0/1:9,3:12:14.98:162,0,15	0/1:10,8:18:80.56:117,0,81	0/1:12,7:20:69.04:159,0,69	0/1:15,12:26:38.80:288,0,39	0/1:19,0:19:29.84:111,0,30	1/1:25,0:23:0.46:94,0,0	1/1:10,0:9:3.01:32,3,0
chr10	22685455	.	C	CACAA	2748.37	PASS	AB=0.810;AC=14;AF=0.250;AN=56;BaseQRankSum=0.014;DP=531;FS=0.474;HRun=0;HaplotypeScore=127.2095;InbreedingCoeff=0.7961;MQ=62.04;MQ0=12;MQRankSum=2.696;QD=16.17;ReadPosRankSum=-3.688;VQSLOD=2.7537;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:12,17:31:2.31:249,0,2	0/0:6,0:6:12:0,12,111	0/0:21,0:12:36.02:0,36,368	0/0:21,0:11:16.28:0,16,231	1/1:7,0:22:38.05:509,38,0	0/0:29,0:29:41.17:0,41,345	0/0:16,0:16:21.58:0,22,157	0/0:30,0:30:74.79:0,75,674	0/0:17,0:17:32.60:0,33,267	1/1:3,0:21:55.82:528,56,0	1/1:2,1:20:44.71:526,45,0	0/0:12,0:12:15.82:0,16,114	0/0:13,0:13:14.04:0,14,170	0/0:12,0:12:27.03:0,27,365	0/0:23,0:23:41.75:0,42,447	0/0:22,0:21:47.87:0,48,483	0/0:12,0:12:26.93:0,27,252	0/0:14,0:13:22.69:0,23,204	0/0:15,0:15:44.56:0,45,405	0/0:18,0:18:18.43:0,18,276	0/0:19,0:19:17.83:0,18,161	0/1:14,0:14:18.52:19,0,179	0/0:20,0:20:28.34:0,28,317	0/0:21,0:21:34.12:0,34,348	0/0:20,0:19:19.91:0,20,210	1/1:7,19:28:51.84:646,52,0	1/1:4,19:25:20.89:433,21,0	1/1:2,0:6:2.99:24,3,0
chr10	22685955	.	C	CA	1618.45	PASS	AB=0.600;AC=7;AF=0.125;AN=56;BaseQRankSum=0.188;DP=492;FS=9.577;HRun=8;HaplotypeScore=58.2547;InbreedingCoeff=0.8392;MQ=81.96;MQ0=1;MQRankSum=-3.242;QD=22.48;ReadPosRankSum=-1.285;VQSLOD=3.2095;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,15:19:42.12:485,42,0	0/0:5,0:5:15:0,15,133	0/0:20,0:20:32.14:0,32,321	0/0:13,0:13:29.98:0,30,266	0/0:23,0:23:66:0,66,595	0/0:32,0:32:93.03:0,93,845	0/0:7,0:7:15:0,15,137	0/0:27,0:27:66.02:0,66,604	0/0:15,0:15:42.02:0,42,384	0/0:22,0:22:54.03:0,54,494	0/0:14,0:14:42.01:0,42,380	0/0:12,0:12:27.01:0,27,247	0/0:19,0:19:47.99:0,48,432	0/0:22,0:22:56.99:0,57,511	0/0:15,0:14:42.01:0,42,380	0/0:16,0:16:36.01:0,36,329	0/0:22,0:22:51:0,51,462	0/0:7,0:7:15:0,15,137	0/0:21,0:22:53.05:0,53,473	0/0:27,0:27:71.05:0,71,633	0/0:10,0:10:24.01:0,24,220	0/0:15,0:14:39.02:0,39,357	0/0:23,0:23:69.03:0,69,629	0/0:10,0:10:30.02:0,30,275	0/0:21,0:21:57.03:0,57,522	1/1:4,17:21:51.12:566,51,0	0/1:7,14:21:9.80:405,0,10	1/1:1,10:11:27.08:312,27,0
chr10	22686464	.	G	GC	17861.50	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=16.443;DP=628;FS=14.923;HRun=0;HaplotypeScore=101.3292;InbreedingCoeff=0.9995;MQ=81.76;MQ0=0;MQRankSum=-4.134;QD=44.43;ReadPosRankSum=2.854;VQSLOD=3.2139;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,31:31:87.30:1388,87,0	1/1:0,8:8:24.08:384,24,0	0/0:17,0:17:50.93:0,51,651	0/0:16,0:16:47.16:0,47,609	1/1:0,34:34:99:1582,99,0	0/0:21,0:21:63.21:0,63,875	0/0:32,0:32:90.27:0,90,1225	1/1:1,25:26:75.22:1146,75,0	1/1:0,21:21:57.19:911,57,0	1/1:2,21:23:63.19:982,63,0	1/1:1,27:28:72.25:1148,72,0	0/0:23,0:23:66.22:0,66,922	0/0:23,0:23:69.23:0,69,965	0/0:19,0:19:57.18:0,57,778	1/1:0,26:26:75.26:1198,75,0	1/1:0,14:14:36.12:575,36,0	1/1:0,18:18:48.16:767,48,0	1/1:0,16:16:48.16:766,48,0	1/1:1,22:23:63.13:954,63,0	1/1:0,29:29:81.28:1294,81,0	1/1:1,24:25:66.23:1055,66,0	0/0:19,0:19:57.19:0,57,797	0/0:25,0:25:72.24:0,72,1006	0/0:14,0:14:42.12:0,42,569	0/0:17,0:17:48.16:0,48,671	1/1:0,27:27:81.28:1295,81,0	1/1:0,44:44:99:2010,126,0	1/1:0,8:9:27.06:406,27,0
chr10	22687219	.	CT	C	1202.90	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=3.305;DP=583;FS=2.259;HRun=2;HaplotypeScore=70.6799;InbreedingCoeff=0.9911;MQ=93.55;MQ0=0;MQRankSum=-3.102;QD=31.66;ReadPosRankSum=3.676;VQSLOD=3.5089;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,123,1753	0/0:7,0:7:18.06:0,18,270	0/0:32,0:31:74.42:0,74,956	0/0:24,0:24:44.45:0,44,555	0/0:24,0:24:72.23:0,72,1043	0/0:21,0:21:63.20:0,63,926	0/0:24,0:24:69.23:0,69,1033	0/0:32,0:32:93.26:0,93,1334	0/0:31,0:31:93.32:0,93,1394	0/0:21,0:21:60.19:0,60,867	0/0:14,0:14:42.13:0,42,610	0/0:18,0:18:51.17:0,51,763	0/0:16,0:16:45.15:0,45,674	0/0:19,0:19:57.18:0,57,834	1/1:0,21:21:57.19:740,57,0	1/1:0,17:17:45.15:584,45,0	0/0:22,0:22:66.21:0,66,966	0/0:11,0:11:27.09:0,27,402	0/0:16,0:16:45.09:0,45,613	0/0:31,0:31:84.26:0,84,1217	0/0:12,0:12:36.12:0,36,540	0/0:19,0:19:51.16:0,51,744	0/0:22,0:22:63.21:0,63,943	0/0:13,0:13:36.12:0,36,523	0/0:21,0:21:63.17:0,63,900	0/0:23,0:23:69.23:0,69,1034	0/0:22,0:21:66.19:0,66,944	0/0:6,0:6:18.06:0,18,264
chr10	22687339	.	AT	A	2410.56	PASS	AB=0.860;AC=24;AF=0.429;AN=56;BaseQRankSum=5.737;DP=576;FS=1.164;HRun=12;HaplotypeScore=79.4779;InbreedingCoeff=0.7690;MQ=76.88;MQ0=1;MQRankSum=-2.989;QD=9.24;ReadPosRankSum=5.767;VQSLOD=2.9074;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,0:29:44.80:129,45,0	1/1:2,8:10:20.91:163,21,0	0/1:15,3:18:47.59:48,0,61	0/0:12,0:11:9.89:0,10,85	0/0:9,0:34:65.78:0,66,391	0/0:24,1:24:39.77:0,40,553	0/0:22,2:24:4.62:0,5,404	0/0:12,0:33:60.71:0,61,342	1/1:3,27:31:70.76:540,71,0	0/0:5,0:13:20.13:0,20,107	0/0:4,0:26:55.18:0,55,306	0/1:19,4:24:30.02:30,0,425	0/0:15,0:15:36.07:0,36,365	0/0:11,0:11:27.03:0,27,263	0/0:24,1:25:33.85:0,34,508	0/0:16,2:18:1.61:0,2,374	1/1:5,13:20:33.94:244,34,0	1/1:4,12:16:34.47:271,34,0	1/1:6,7:14:22.92:168,23,0	1/1:7,24:31:62.61:482,63,0	1/1:5,16:22:48.86:360,49,0	0/0:19,2:22:3.16:0,3,358	0/0:17,1:18:39.06:0,39,384	0/0:13,1:14:18.83:0,19,366	0/0:23,1:25:36.04:0,36,575	1/1:1,0:15:14.27:56,14,0	1/1:5,1:18:27.41:93,27,0	1/1:4,0:11:14.25:41,14,0
chr10	22687468	.	AG	A	2343.73	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=6.153;DP=552;FS=1.638;HRun=1;HaplotypeScore=58.7016;InbreedingCoeff=0.9702;MQ=82.95;MQ0=0;MQRankSum=-4.377;QD=36.06;ReadPosRankSum=1.844;VQSLOD=3.9141;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,15:16:6.73:588,7,0	0/0:10,0:10:30.09:0,30,456	0/0:23,0:23:30.34:0,30,864	0/0:17,0:17:50.53:0,51,757	0/0:30,0:30:90.31:0,90,1436	0/0:19,0:19:57.18:0,57,885	0/0:16,0:16:48.15:0,48,743	0/0:33,0:33:93.32:0,93,1485	0/0:18,0:18:54.18:0,54,863	0/0:27,1:28:78.25:0,78,1187	0/0:23,0:23:69.24:0,69,1103	0/0:24,0:24:72.21:0,72,1103	0/0:23,0:23:69.24:0,69,1103	0/0:16,0:16:48.16:0,48,767	0/0:20,0:20:60.19:0,60,933	0/0:25,0:25:75.23:0,75,1153	0/0:16,0:16:48.11:0,48,711	0/0:14,0:14:42.14:0,42,668	0/0:19,0:19:57.19:0,57,911	0/0:21,0:21:63.19:0,63,982	0/0:25,0:25:72.23:0,72,1128	0/0:29,0:29:87.30:0,87,1385	0/0:14,0:14:42.14:0,42,671	0/0:7,0:7:21.07:0,21,336	0/0:17,0:17:51.17:0,51,815	1/1:0,21:21:63.18:861,63,0	1/1:0,20:20:57.19:797,57,0	1/1:0,8:8:18.06:252,18,0
chr10	22688819	.	CA	C	3733.11	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=11.607;DP=721;FS=23.940;HRun=6;HaplotypeScore=66.1379;InbreedingCoeff=0.9676;MQ=76.06;MQ0=0;MQRankSum=0.144;QD=28.72;ReadPosRankSum=1.557;VQSLOD=1.9017;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:75.21:0,75,954	1/1:0,13:13:39.10:419,39,0	0/0:13,0:13:35.94:0,36,412	0/0:16,0:16:31.82:0,32,413	0/0:31,0:31:84.27:0,84,1105	0/0:29,0:29:81.24:0,81,1038	0/0:31,0:31:84.19:0,84,1065	0/0:39,0:39:99:0,105,1333	1/1:1,24:25:69.17:742,69,0	0/0:31,0:31:93.30:0,93,1222	0/0:29,0:29:84.26:0,84,1090	0/0:32,0:32:90.26:0,90,1154	0/0:36,0:36:99:0,105,1367	0/0:37,0:37:99:0,108,1405	0/0:27,0:27:81.25:0,81,1051	0/0:26,0:26:69.22:0,69,908	1/1:2,19:21:54.13:580,54,0	1/1:1,1:2:3.01:32,3,0	1/1:2,18:20:54.13:574,54,0	1/1:3,27:30:78.19:838,78,0	1/1:2,17:19:51.13:548,51,0	0/0:26,0:26:72.22:0,72,930	0/0:22,0:22:66.21:0,66,865	0/0:20,0:20:57.19:0,57,749	0/0:22,0:22:63.18:0,63,811	0/0:34,0:34:84.26:0,84,1081	0/0:44,0:44:99:0,123,1602	0/0:19,0:19:45.15:0,45,592
chr10	22689067	.	CCTCTCTCTCTCTCTCTCTCT	C	220.46	PASS	AC=4;AF=0.074;AN=54;BaseQRankSum=0.929;DP=413;FS=0.000;HRun=0;HaplotypeScore=185.3231;InbreedingCoeff=0.4017;MQ=64.21;MQ0=20;MQRankSum=-2.691;QD=7.11;ReadPosRankSum=-1.548;VQSLOD=2.4789;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:26:30.05:0,30,708	0/0:9,0:9:12.01:0,12,324	./.	0/0:21,0:10:3:0,3,27	0/0:20,0:20:17.99:0,18,200	0/0:13,0:12:18.89:0,19,257	0/0:12,0:9:18.03:0,18,222	0/0:17,0:16:9:0,9,80	0/0:12,0:12:11.74:0,12,155	0/0:12,0:11:12:0,12,197	0/0:13,0:13:6.01:0,6,74	0/0:9,0:10:12.50:0,13,293	0/0:17,0:19:24.04:0,24,547	0/0:7,0:7:6.02:0,6,210	1/1:12,7:19:1.58:153,2,0	1/1:5,7:12:2.63:159,3,0	0/0:14,0:12:18.45:0,18,245	0/0:12,0:11:10.78:0,11,155	0/0:15,0:14:21.04:0,21,668	0/0:13,0:13:9.87:0,10,76	0/0:14,0:12:10.83:0,11,161	0/0:13,0:13:6.01:0,6,117	0/0:6,0:6:5.99:0,6,50	0/0:6,0:8:6.01:0,6,102	0/0:16,0:15:9:0,9,125	0/0:14,0:18:35.83:0,36,966	0/0:12,0:10:18:0,18,178	0/0:22,0:20:23.92:0,24,389
chr10	22689123	.	TCTCTCC	T	805.98	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=3.847;DP=444;FS=5.385;HRun=0;HaplotypeScore=96.6415;InbreedingCoeff=0.7764;MQ=57.40;MQ0=49;MQRankSum=2.364;QD=19.66;ReadPosRankSum=-0.406;VQSLOD=2.8993;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:16:32.39:0,32,765	0/0:10,0:9:9.49:0,9,139	0/0:15,0:9:9.85:0,10,82	0/0:24,0:14:6.99:0,7,324	1/1:12,1:13:20.99:411,21,0	0/0:24,0:21:37.49:0,37,794	0/0:19,0:13:27.09:0,27,694	0/0:24,0:23:57.07:0,57,1133	0/0:14,0:14:15.05:0,15,391	1/1:7,10:13:26.92:473,27,0	1/1:3,8:10:2.97:53,3,0	0/0:16,0:16:40.38:0,40,878	0/0:27,0:23:50.11:0,50,1190	0/0:13,0:13:27.09:0,27,672	0/0:14,0:13:14.66:0,15,274	0/0:13,0:13:17.14:0,17,390	0/0:13,0:11:6:0,6,70	0/0:10,0:8:5.99:0,6,87	0/0:13,0:11:18.06:0,18,445	0/0:14,0:13:24.37:0,24,278	0/0:18,0:14:21.07:0,21,520	0/0:16,0:16:24.55:0,25,579	0/0:13,0:13:27.54:0,28,516	0/0:21,0:19:33.11:0,33,824	0/0:13,0:9:20.90:0,21,477	0/0:18,0:18:36.12:0,36,901	0/0:11,0:10:20.70:0,21,336	0/0:10,0:5:12.04:0,12,291
chr10	22689160	.	GCTGT	G	2252.92	PASS	AB=0.990;AC=19;AF=0.339;AN=56;BaseQRankSum=7.213;DP=473;FS=2.368;HRun=0;HaplotypeScore=98.7122;InbreedingCoeff=0.5553;MQ=68.09;MQ0=4;MQRankSum=-1.780;QD=12.45;ReadPosRankSum=0.668;VQSLOD=3.0835;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:18:33.85:0,34,379	1/1:2,6:8:6.02:105,6,0	0/0:34,0:20:38.99:0,39,370	0/0:35,0:28:20.43:0,20,272	0/1:18,0:18:66.92:103,0,67	0/0:19,0:19:54.02:0,54,898	0/0:16,0:16:45.03:0,45,676	0/0:23,0:22:56.88:0,57,490	1/1:3,14:16:15.05:247,15,0	0/1:18,1:19:99:252,0,203	0/1:15,0:15:28.94:29,0,204	0/0:15,0:15:38.84:0,39,516	0/0:23,0:23:48:0,48,749	0/0:17,0:17:51:0,51,872	0/1:12,0:12:30.52:31,0,71	0/0:10,0:10:6.29:0,6,112	1/1:1,13:14:24.08:420,24,0	1/1:0,12:12:11.87:209,12,0	1/1:6,8:13:24.02:308,24,0	1/1:1,15:16:17.89:300,18,0	1/1:11,6:17:32.76:401,33,0	0/0:16,0:16:45:0,45,665	0/0:16,0:16:42.07:0,42,846	0/0:18,0:18:36:0,36,516	0/1:19,0:19:44.98:45,0,537	0/0:15,0:15:36.05:0,36,463	0/0:12,0:12:29.87:0,30,460	0/0:4,0:4:11.96:0,12,165
chr10	22689167	.	G	GTCTA	328.78	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=4.770;DP=472;FS=5.736;HRun=0;HaplotypeScore=107.0653;InbreedingCoeff=0.0456;MQ=63.47;MQ0=4;MQRankSum=0.563;QD=3.87;ReadPosRankSum=-1.884;VQSLOD=1.6291;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:19,0:18:44.40:44,0,341	0/0:8,0:8:6:0,6,54	0/0:29,0:18:39.10:0,39,637	0/0:29,0:22:26.42:0,26,538	1/1:11,8:19:0.74:196,1,0	0/0:20,0:20:57.16:0,57,932	0/0:17,0:17:48.14:0,48,769	0/0:24,0:22:57.17:0,57,915	0/0:16,0:16:13.83:0,14,114	0/0:18,0:18:22.68:0,23,208	0/0:18,0:18:19.25:0,19,204	0/0:15,0:15:41.94:0,42,622	0/0:23,0:23:57.16:0,57,913	0/0:18,0:18:54.14:0,54,842	0/0:13,0:13:27.56:0,28,408	0/0:10,0:10:20.99:0,21,302	0/0:16,0:16:27.02:0,27,245	0/0:12,0:12:11.84:0,12,110	0/0:11,0:9:16.36:0,16,137	0/0:15,0:15:15.01:0,15,138	0/1:16,0:16:6.69:7,0,118	0/0:17,0:17:50.99:0,51,708	0/0:17,0:17:48.08:0,48,754	0/0:19,0:19:42.08:0,42,601	0/0:21,0:21:51.16:0,51,839	0/1:15,0:15:79.60:80,0,361	0/1:12,0:12:91.25:91,0,125	0/1:4,0:4:32.11:32,0,70
chr10	22689171	.	G	GTCTA	1400.30	PASS	AB=1.000;AC=11;AF=0.220;AN=50;BaseQRankSum=-4.658;DP=472;FS=1.740;HRun=0;HaplotypeScore=104.5914;InbreedingCoeff=0.7375;MQ=62.36;MQ0=4;MQRankSum=0.177;QD=15.22;ReadPosRankSum=-2.384;VQSLOD=3.0903;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,9:18:9.02:209,9,0	0/0:7,0:7:6.02:0,6,64	./.	./.	1/1:19,0:18:12.02:233,12,0	0/0:20,0:20:33.06:0,33,439	0/0:17,0:17:18.02:0,18,212	./.	0/0:17,0:16:18.02:0,18,174	0/0:19,0:19:3.97:0,4,162	0/1:21,0:21:79.68:112,0,80	0/0:14,0:14:12.03:0,12,162	0/0:22,0:22:23.10:0,23,309	0/0:18,0:18:27.06:0,27,366	0/0:9,0:15:21:0,21,187	0/0:9,0:11:6.01:0,6,56	0/0:17,0:17:30.04:0,30,303	0/0:12,0:12:11.86:0,12,126	0/0:13,0:11:17.94:0,18,172	0/0:15,0:15:15.04:0,15,160	0/0:17,0:17:17.82:0,18,185	0/0:18,0:18:20.35:0,20,212	0/0:18,0:18:35.99:0,36,434	0/0:20,0:20:18:0,18,207	0/0:14,0:21:36.07:0,36,436	1/1:8,8:16:24.03:450,24,0	1/1:5,8:13:18.06:419,18,0	1/1:4,0:4:6.02:138,6,0
chr10	22689360	.	A	AAAAAAG	1052.40	PASS	AB=0.870;AC=15;AF=0.278;AN=54;BaseQRankSum=-0.732;DP=333;FS=23.368;HRun=0;HaplotypeScore=61.4536;InbreedingCoeff=0.5998;MQ=63.84;MQ0=18;MQRankSum=-3.446;QD=8.92;ReadPosRankSum=-0.825;VQSLOD=-0.0853;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:20:41.70:0,42,508	1/1:0,1:8:12:259,12,0	0/0:38,0:14:10.55:0,11,214	0/1:27,0:10:10.83:11,0,27	0/0:8,0:8:23.02:0,23,243	0/0:5,0:5:15.04:0,15,208	0/0:10,0:8:19.23:0,19,249	0/0:28,0:28:20.41:0,20,382	1/1:1,5:6:3.01:94,3,0	0/0:8,0:7:21:0,21,235	0/0:8,0:7:19.45:0,19,195	0/0:7,0:6:15.02:0,15,180	0/0:3,0:3:8.95:0,9,97	0/0:8,0:8:17.90:0,18,158	0/1:6,0:6:6.23:6,0,14	./.	0/1:8,0:21:62.31:119,0,62	1/1:1,8:9:6.02:131,6,0	1/1:11,0:17:32.82:364,33,0	1/1:2,5:5:3.01:94,3,0	1/1:12,0:13:17.26:144,17,0	0/0:3,0:3:9.02:0,9,129	0/0:6,0:6:15.04:0,15,216	0/0:23,0:23:47.80:0,48,692	0/0:6,0:6:14.93:0,15,153	0/0:11,0:10:18.79:0,19,148	0/0:8,0:8:18.03:0,18,231	0/0:12,0:8:11.95:0,12,143
chr10	22689534	.	GTA	G	120.93	PASS	AC=6;AF=0.300;AN=20;BaseQRankSum=1.002;DP=122;FS=1.830;HRun=0;HaplotypeScore=25.0873;InbreedingCoeff=0.4372;MQ=78.07;MQ0=1;MQRankSum=1.469;QD=8.64;ReadPosRankSum=1.135;VQSLOD=2.8498;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:15:11.47:0,11,111	./.	./.	./.	./.	./.	./.	0/0:15,0:15:2.98:0,3,21	0/0:2,0:2:2.99:0,3,23	0/0:4,0:4:3.01:0,3,34	./.	./.	./.	1/1:3,0:3:0.47:1,0,0	0/0:2,0:2:3.01:0,3,44	./.	0/0:10,0:10:9.50:0,9,106	0/0:5,0:4:3.88:0,4,27	./.	./.	./.	./.	./.	./.	1/1:4,0:4:2.98:22,3,0	./.	./.	1/1:3,4:7:18.03:186,18,0
chr10	22690256	.	T	TAC	1888.06	PASS	AB=0.957;AC=15;AF=0.268;AN=56;BaseQRankSum=1.060;DP=594;FS=12.995;HRun=0;HaplotypeScore=93.6446;InbreedingCoeff=0.5845;MQ=57.62;MQ0=17;MQRankSum=0.297;QD=9.21;ReadPosRankSum=4.029;VQSLOD=2.2977;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:41:23.95:275,24,0	0/0:2,0:2:2.96:0,3,19	0/0:34,0:14:5.31:0,5,47	0/0:40,0:26:26.58:0,27,268	0/0:28,0:28:62.82:0,63,672	0/0:17,0:17:10.92:0,11,243	0/0:30,0:31:41.90:0,42,437	0/1:22,1:23:20.07:20,0,245	0/0:5,0:5:1.83:0,2,4	0/1:19,2:20:50.02:50,0,378	0/0:22,0:25:44.38:0,44,419	0/0:21,0:21:44.94:0,45,478	0/0:19,0:19:38.58:0,39,409	0/0:22,0:23:42.84:0,43,426	1/1:4,25:29:44.99:707,45,0	1/1:5,14:19:18.06:283,18,0	0/1:14,0:13:6.41:6,0,27	0/0:6,0:6:5.37:0,5,24	0/0:14,0:14:2.35:0,2,93	0/0:15,0:15:8.81:0,9,57	0/0:15,0:14:3.18:0,3,20	0/0:12,0:12:23.79:0,24,240	0/0:20,0:20:24.07:0,24,279	0/0:35,0:37:89.73:0,90,997	0/0:24,0:24:37.41:0,37,394	1/1:9,3:25:40.38:403,40,0	1/1:5,1:24:19.74:225,20,0	1/1:4,1:8:9.01:100,9,0
chr10	22691071	.	AT	A	5615.86	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=10.358;DP=376;FS=2.462;HRun=9;HaplotypeScore=36.5927;InbreedingCoeff=0.9670;MQ=65.13;MQ0=0;MQRankSum=0.111;QD=23.40;ReadPosRankSum=0.452;VQSLOD=5.2705;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,13:15:39.02:357,39,0	1/1:1,3:4:9:82,9,0	0/0:4,0:4:12.03:0,12,133	0/0:3,0:3:6:0,6,55	1/1:0,13:13:39.02:357,39,0	0/0:14,0:14:39.10:0,39,441	0/0:14,0:14:36.11:0,36,416	1/1:6,27:33:78.01:707,78,0	1/1:2,10:12:30.01:274,30,0	1/1:2,16:18:47.99:432,48,0	1/1:2,11:13:33.02:302,33,0	0/0:8,0:8:24.07:0,24,277	0/0:17,0:17:45.13:0,45,519	0/0:7,0:7:21.06:0,21,242	0/0:12,0:12:30.09:0,30,346	0/0:13,0:13:33.10:0,33,381	1/1:1,25:26:75.03:686,75,0	1/1:1,7:8:21.01:192,21,0	1/1:3,12:15:36.01:327,36,0	1/1:1,17:18:51.03:467,51,0	1/1:0,11:11:33.02:302,33,0	0/0:9,0:9:27.08:0,27,312	0/0:18,0:18:45.12:0,45,507	0/0:4,0:4:12.02:0,12,129	0/0:13,0:13:30.08:0,30,337	1/1:3,20:23:39.38:526,39,0	1/1:3,14:17:30.01:275,30,0	1/1:2,12:14:36.02:329,36,0
chr10	22691230	.	T	TA	1730.97	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-7.499;DP=453;FS=18.415;HRun=9;HaplotypeScore=47.5487;InbreedingCoeff=0.9306;MQ=85.02;MQ0=0;MQRankSum=-0.146;QD=21.37;ReadPosRankSum=0.195;VQSLOD=2.2008;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:44.99:0,45,391	0/0:8,0:8:23.99:0,24,208	0/0:17,0:17:35.30:0,35,287	0/0:12,0:12:26.83:0,27,234	1/1:3,21:24:8.01:532,8,0	0/0:17,1:18:5.79:0,6,279	0/0:5,0:5:15:0,15,130	0/0:21,0:21:56.96:0,57,490	0/0:9,0:9:26.99:0,27,234	1/1:2,12:15:38.94:412,39,0	1/1:5,14:21:44.94:469,45,0	0/0:10,0:10:26.98:0,27,230	0/0:14,0:14:38.99:0,39,339	0/0:10,0:10:20.98:0,21,182	0/0:17,1:18:11.81:0,12,331	0/0:10,0:10:20.99:0,21,182	0/0:22,0:22:62.98:0,63,547	1/1:4,17:20:45.06:473,45,0	0/0:15,0:15:38.98:0,39,336	0/0:23,2:25:35.79:0,36,540	0/0:9,0:9:23.98:0,24,208	0/0:14,0:14:32.98:0,33,286	0/0:13,0:13:32.99:0,33,287	0/0:18,0:18:41.98:0,42,365	0/0:27,0:27:79.99:0,80,678	0/0:28,1:29:41.77:0,42,592	0/0:12,0:12:32.99:0,33,286	0/0:18,1:19:17.80:0,18,384
chr10	22691281	.	GGAGAGAGA	G	194.30	PASS	AC=4;AF=0.074;AN=54;BaseQRankSum=1.888;DP=474;FS=9.491;HRun=0;HaplotypeScore=124.2273;InbreedingCoeff=0.4518;MQ=75.28;MQ0=6;MQRankSum=-3.184;QD=6.07;ReadPosRankSum=0.141;VQSLOD=1.6416;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:26:39.13:0,39,1160	./.	0/0:25,0:17:0:0,0,0	0/0:26,0:20:0:0,0,0	0/0:16,0:16:3.01:0,3,86	0/0:18,0:19:21.07:0,21,669	0/0:11,0:10:9.50:0,10,261	0/0:20,0:20:13.86:0,14,322	0/0:14,0:14:11.83:0,12,300	0/0:19,0:19:30.06:0,30,805	0/0:16,0:16:3.01:0,3,70	0/0:11,0:11:18.06:0,18,473	0/0:6,0:11:6.02:0,6,191	0/0:12,0:12:14.91:0,15,399	1/1:17,1:17:3.01:67,3,0	1/1:6,8:14:9.03:224,9,0	0/0:19,0:18:12.04:0,12,283	0/0:13,0:13:6.02:0,6,117	0/0:14,0:14:4.71:0,5,26	0/0:22,0:22:6.02:0,6,183	0/0:9,0:9:6.02:0,6,170	0/0:10,0:10:6.02:0,6,108	0/0:13,0:15:9.03:0,9,287	0/0:24,0:24:8.71:0,9,225	0/0:19,0:18:6.02:0,6,168	0/0:23,0:23:32.94:0,33,764	0/0:22,0:21:32.39:0,32,787	0/0:18,0:17:15.10:0,15,276
chr10	22691559	.	T	TA	1300.54	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=5.157;DP=437;FS=4.363;HRun=10;HaplotypeScore=69.7988;InbreedingCoeff=0.8621;MQ=81.05;MQ0=1;MQRankSum=0.454;QD=11.31;ReadPosRankSum=1.081;VQSLOD=3.1787;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:22:52.93:0,53,421	1/1:1,4:6:5.17:90,5,0	0/1:36,0:25:3.32:3,0,189	0/0:26,0:18:7.99:0,8,136	0/0:20,0:20:47.92:0,48,391	0/0:18,0:18:35.21:0,35,294	0/0:10,0:10:26.95:0,27,219	0/0:17,0:17:44.92:0,45,365	1/1:1,5:6:12.03:128,12,0	0/0:17,0:17:35.92:0,36,295	0/0:15,0:16:37.98:0,38,301	0/0:14,0:14:23.94:0,24,194	0/0:7,0:7:14.97:0,15,123	0/0:10,0:10:29.97:0,30,246	0/0:3,0:14:18.33:0,18,54	0/0:1,0:11:16.29:0,16,47	1/1:2,8:10:21.05:223,21,0	1/1:6,14:20:12.99:330,13,0	1/1:4,8:12:24.06:256,24,0	1/1:3,16:19:17.46:391,17,0	1/1:3,3:6:6.02:64,6,0	0/0:13,0:15:27.97:0,28,205	0/0:16,0:16:38.95:0,39,320	0/0:8,0:8:23.95:0,24,194	0/0:22,0:22:56.92:0,57,468	0/0:22,0:22:56.93:0,57,468	0/0:21,0:21:47.93:0,48,394	0/0:14,0:14:41.92:0,42,340
chr10	22692305	.	CA	C	950.53	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=0.248;DP=225;FS=2.201;HRun=9;HaplotypeScore=40.8247;InbreedingCoeff=0.7787;MQ=88.70;MQ0=1;MQRankSum=-0.524;QD=17.93;ReadPosRankSum=0.702;VQSLOD=3.3598;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:6:17.94:0,18,145	1/1:0,4:4:12.01:110,12,0	0/0:30,0:22:15.84:0,16,394	0/0:20,0:12:23.97:0,24,285	0/0:12,0:12:33.01:0,33,351	0/0:7,0:7:20.42:0,20,216	0/0:5,0:5:12.04:0,12,139	0/0:20,0:20:45.12:0,45,511	1/1:0,3:3:9:82,9,0	0/0:9,0:9:21.06:0,21,242	0/0:7,0:7:18.05:0,18,204	0/0:4,0:4:12.04:0,12,139	0/0:1,0:1:3.01:0,3,35	0/0:3,0:3:9.03:0,9,104	0/0:1,0:1:3.01:0,3,35	0/1:4,0:4:15.39:15,0,90	1/1:0,9:9:24.01:220,24,0	1/1:1,5:6:15:137,15,0	1/1:2,11:13:27.01:247,27,0	1/1:1,6:7:18:165,18,0	1/1:0,7:6:18.01:165,18,0	0/0:5,0:5:15.04:0,15,171	0/0:6,0:6:12.04:0,12,138	0/0:5,0:5:15.04:0,15,173	0/0:7,0:7:21.06:0,21,242	0/0:10,0:10:17.87:0,18,145	0/0:9,0:8:23.83:0,24,179	0/0:3,0:3:5.93:0,6,39
chr10	22692406	.	CGTGTGTGTGTGT	C	473.06	PASS	AB=0.905;AC=7;AF=0.152;AN=46;BaseQRankSum=3.601;DP=334;FS=1.748;HRun=0;HaplotypeScore=135.9011;InbreedingCoeff=0.2020;MQ=68.87;MQ0=13;MQRankSum=-2.968;QD=4.68;ReadPosRankSum=-0.416;VQSLOD=2.4001;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:32,0:29:24.63:25,0,940	./.	./.	./.	0/0:6,0:7:1.98:0,2,142	0/0:8,0:15:12.04:0,12,528	0/0:11,0:15:12.04:0,12,526	0/0:13,0:13:2.98:0,3,21	1/1:3,1:4:3.01:103,3,0	0/0:10,0:9:6.02:0,6,234	0/0:10,0:9:9.03:0,9,377	0/0:10,0:10:9.03:0,9,460	0/0:5,0:5:9.03:0,9,425	0/0:9,0:9:12.04:0,12,454	./.	0/0:12,0:12:5.89:0,6,287	0/1:15,9:25:14.75:337,0,15	0/0:9,0:8:6.02:0,6,118	0/0:13,0:11:0.47:0,0,1	1/1:8,2:10:3.48:104,3,0	0/1:30,0:27:13.32:17,0,13	0/0:7,0:7:6.02:0,6,287	0/0:4,0:4:6.02:0,6,350	0/0:16,0:19:18.06:0,18,819	./.	0/0:15,0:15:27.09:0,27,1286	0/0:5,0:5:9.03:0,9,388	0/0:3,0:2:0:0,0,0
chr10	22692670	.	AGGGAGG	A	608.20	PASS	AB=1.000;AC=19;AF=0.475;AN=40;BaseQRankSum=-4.446;DP=234;FS=5.738;HRun=0;HaplotypeScore=45.6639;InbreedingCoeff=0.4461;MQ=27.16;MQ0=86;MQRankSum=4.958;QD=6.02;ReadPosRankSum=1.701;VQSLOD=0.7135;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:5:2.84:48,3,0	./.	./.	./.	0/0:9,0:6:0:0,0,0	0/0:13,0:9:9.65:0,10,75	0/0:15,0:11:8.99:0,9,76	1/1:3,0:7:0.88:17,1,0	1/1:11,0:7:12.02:153,12,0	0/0:21,0:14:8.19:0,8,124	0/0:5,0:5:0:0,0,0	0/0:5,0:3:5.35:0,5,30	0/0:8,0:6:0.94:0,1,66	0/1:11,0:10:14.10:14,0,34	./.	./.	1/1:13,0:8:11.03:88,11,0	./.	1/1:4,0:2:6.02:109,6,0	./.	./.	0/0:12,0:10:7.72:0,8,37	0/0:8,0:7:7.57:0,8,37	1/1:18,0:8:2.62:40,3,0	0/0:10,0:7:5.47:0,5,30	1/1:5,4:5:0.13:159,0,0	1/1:6,0:1:2.99:24,3,0	1/1:11,0:5:11.18:88,11,0
chr10	22693186	.	CTTTCCTTTCCTTTCCTTTCT	C	4366.29	PASS	AB=0.994;AC=22;AF=0.393;AN=56;BaseQRankSum=-1.375;DP=820;FS=6.704;HRun=0;HaplotypeScore=398.7551;InbreedingCoeff=0.4569;MQ=63.57;MQ0=12;MQRankSum=-3.218;QD=10.42;ReadPosRankSum=-0.808;VQSLOD=1.6494;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:42.08:0,42,2578	1/1:1,10:11:9.03:485,9,0	0/1:35,0:12:0.93:1,0,11	0/1:40,0:18:0.26:1,0,0	0/0:30,0:30:12.22:0,12,2146	0/0:24,0:24:48.11:0,48,2866	0/0:30,0:29:75.14:0,75,2676	0/1:29,0:28:19.98:20,0,272	1/1:7,27:33:12.04:621,12,0	0/1:40,0:40:82.88:83,0,2502	0/1:23,0:23:21.73:22,0,1725	0/0:23,0:23:51.16:0,51,3347	0/0:29,0:29:78.26:0,78,5103	0/0:34,0:34:84.25:0,84,4064	0/1:34,0:33:23.50:23,0,2397	0/0:34,0:32:19.19:0,19,2260	1/1:22,0:21:11.05:646,11,0	1/1:22,0:23:38.58:757,39,0	1/1:13,6:19:22.13:463,22,0	1/1:4,26:30:35.69:552,36,0	1/1:15,0:15:23.96:496,24,0	0/0:32,0:32:78.25:0,78,4359	0/0:30,0:30:78.21:0,78,3911	0/0:50,0:50:99:0,141,8251	0/0:30,0:29:66.20:0,66,3583	0/1:43,0:43:99:142,0,2478	0/0:25,0:25:45.27:0,45,2908	0/1:16,0:16:55.43:55,0,358
chr10	22693706	.	TA	T	5032.37	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=12.751;DP=659;FS=3.092;HRun=2;HaplotypeScore=62.7632;InbreedingCoeff=0.9999;MQ=90.51;MQ0=0;MQRankSum=-1.828;QD=37.00;ReadPosRankSum=0.341;VQSLOD=5.3913;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,135,2023	1/1:1,14:15:42.14:545,42,0	0/0:27,0:27:75.24:0,75,1084	0/0:25,0:25:72.24:0,72,1072	0/0:26,0:26:78.26:0,78,1169	0/0:17,0:17:51.16:0,51,745	0/0:22,0:22:63.20:0,63,923	0/0:22,0:22:66.22:0,66,973	1/1:0,20:20:57.19:740,57,0	0/0:27,0:27:72.24:0,72,1079	0/0:24,0:24:72.24:0,72,1078	0/0:21,0:21:60.20:0,60,899	0/0:19,0:19:57.19:0,57,853	0/0:21,0:21:63.20:0,63,923	0/0:35,0:35:99:0,99,1458	0/0:34,0:34:99:0,99,1444	1/1:0,20:20:60.20:779,60,0	1/1:0,11:11:33.11:428,33,0	1/1:0,23:23:69.22:884,69,0	1/1:0,34:34:96.21:1189,96,0	1/1:0,13:13:36.12:467,36,0	0/0:22,0:22:66.22:0,66,982	0/0:22,0:22:66.22:0,66,988	0/0:29,0:29:84.25:0,84,1218	0/0:24,0:24:72.21:0,72,1052	0/0:23,0:23:69.23:0,69,1017	0/0:20,0:20:60.20:0,60,898	0/0:18,0:18:54.18:0,54,809
chr10	22694743	.	CT	C	6331.21	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=7.944;DP=583;FS=2.260;HRun=7;HaplotypeScore=60.3716;InbreedingCoeff=0.9437;MQ=72.41;MQ0=0;MQRankSum=-2.526;QD=26.94;ReadPosRankSum=2.085;VQSLOD=5.6742;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:42.13:0,42,528	1/1:2,10:12:30.06:306,30,0	0/0:12,0:12:15.01:0,15,242	0/0:7,0:7:0.20:0,0,121	1/1:1,36:37:99:1087,108,0	0/0:19,0:19:57.14:0,57,678	0/0:7,0:7:18.05:0,18,215	0/0:29,0:29:72.22:0,72,893	1/1:3,14:17:7.36:391,7,0	1/1:0,27:27:81.17:821,81,0	1/1:1,19:20:57.13:578,57,0	0/0:9,0:9:24.08:0,24,302	0/0:24,0:24:72.22:0,72,892	0/0:17,0:17:45.14:0,45,565	0/0:21,0:21:60.18:0,60,742	0/0:10,0:10:24.08:0,24,302	1/1:3,27:30:78.18:796,78,0	1/1:1,16:17:42.09:427,42,0	1/1:5,23:28:69.15:704,69,0	1/1:6,35:41:99:1069,105,0	1/1:1,5:6:15.03:153,15,0	0/0:21,0:21:60.19:0,60,754	0/0:31,0:31:90.26:0,90,1116	0/0:15,0:15:45.14:0,45,566	0/0:26,0:26:75.23:0,75,932	0/0:29,0:29:78.23:0,78,942	0/0:32,0:32:90.27:0,90,1113	0/0:25,0:25:60.19:0,60,754
chr10	22695363	.	AG	A	4780.17	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=10.058;DP=604;FS=3.952;HRun=2;HaplotypeScore=60.1166;InbreedingCoeff=0.9977;MQ=85.99;MQ0=0;MQRankSum=-3.822;QD=35.15;ReadPosRankSum=2.590;VQSLOD=5.3864;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:69.20:0,69,982	1/1:0,6:6:18.06:234,18,0	0/0:25,0:24:69.22:0,69,988	0/0:19,0:19:47.41:0,47,568	0/0:13,0:13:33.11:0,33,492	0/0:24,0:24:72.23:0,72,1056	0/0:17,0:17:51.17:0,51,765	0/0:30,0:30:87.29:0,87,1285	1/1:0,26:26:75.24:974,75,0	0/0:29,0:29:87.25:0,87,1271	0/0:24,0:24:69.23:0,69,1031	0/0:20,0:20:60.16:0,60,874	0/0:25,0:25:75.25:0,75,1124	0/0:19,0:19:54.18:0,54,807	0/0:19,0:19:57.17:0,57,816	0/0:24,0:24:72.22:0,72,1034	1/1:0,22:22:63.20:818,63,0	1/1:1,18:19:45.15:584,45,0	1/1:2,20:22:60.19:768,60,0	1/1:1,22:23:57.19:740,57,0	1/1:0,18:18:51.17:662,51,0	0/0:24,0:24:69.23:0,69,1023	0/0:21,0:21:63.21:0,63,944	0/0:25,0:25:69.23:0,69,1033	0/0:25,0:25:72.24:0,72,1079	0/0:24,0:24:72.24:0,72,1078	0/0:30,0:30:81.26:0,81,1185	0/0:7,0:7:21.07:0,21,315
chr10	22695652	.	CAG	C	44.37	PASS	AB=0.960;AC=6;AF=0.125;AN=48;BaseQRankSum=4.360;DP=497;FS=5.780;HRun=0;HaplotypeScore=44.0785;InbreedingCoeff=0.1447;MQ=31.59;MQ0=128;MQRankSum=-3.696;QD=0.45;ReadPosRankSum=-2.319;VQSLOD=0.0848;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:14:11.36:0,11,125	./.	0/1:23,0:3:0.75:1,0,43	0/1:27,0:3:9.99:10,0,48	0/0:6,0:4:3.01:0,3,54	0/0:12,0:9:15.03:0,15,246	0/0:39,0:30:51.17:0,51,885	0/0:24,0:10:21.07:0,21,365	0/0:18,0:8:3.01:0,3,53	0/0:24,0:15:21.07:0,21,377	./.	0/0:18,0:15:30.10:0,30,507	0/0:22,0:19:20.59:0,21,609	0/0:24,0:18:23.28:0,23,396	0/0:18,0:16:15.05:0,15,270	0/0:22,0:18:33.11:0,33,574	1/1:6,7:12:6.02:76,6,0	0/1:6,1:6:12.37:40,0,12	./.	./.	0/1:27,1:19:25.51:26,0,38	0/0:11,0:8:4.26:0,4,57	0/0:11,0:8:9.03:0,9,160	0/0:36,0:31:40.34:0,40,695	0/0:19,0:9:1.25:0,1,3	0/0:16,0:6:12.04:0,12,214	0/0:5,0:4:6.02:0,6,108	0/0:4,0:3:9.03:0,9,162
chr10	22695672	.	CAG	C	200.73	PASS	AB=0.929;AC=10;AF=0.200;AN=50;BaseQRankSum=5.302;DP=455;FS=1.096;HRun=0;HaplotypeScore=48.8541;InbreedingCoeff=0.4926;MQ=36.80;MQ0=80;MQRankSum=-4.075;QD=2.31;ReadPosRankSum=-3.082;VQSLOD=0.6439;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:18:8.53:0,9,126	./.	0/1:28,0:3:2.60:3,0,42	0/0:31,0:6:14.58:0,15,230	0/0:4,0:4:2.98:0,3,54	0/0:12,0:8:12.01:0,12,169	0/0:38,0:30:66.23:0,66,1181	0/0:15,0:8:18.04:0,18,286	0/1:10,2:8:43.25:75,0,43	0/0:23,0:16:19.18:0,19,474	1/1:3,0:2:0.47:1,0,0	0/0:21,0:17:39.11:0,39,631	0/0:23,0:20:25.19:0,25,704	0/0:22,0:18:32.71:0,33,559	0/0:16,0:16:24.07:0,24,402	0/0:20,0:18:39.13:0,39,679	1/1:2,8:10:9.03:118,9,0	1/1:4,4:7:10.58:114,11,0	./.	./.	1/1:26,0:21:3.35:15,3,0	0/0:10,0:9:3.49:0,3,56	0/0:7,0:6:6.02:0,6,97	0/0:33,0:31:58.40:0,58,1022	0/0:12,0:9:2.99:0,3,23	0/0:18,0:14:27.09:0,27,479	0/0:6,0:6:18.06:0,18,303	0/0:6,0:5:15.05:0,15,269
chr10	22697092	.	AAT	A	2818.74	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=13.838;DP=462;FS=2.808;HRun=0;HaplotypeScore=60.5463;InbreedingCoeff=0.9929;MQ=79.91;MQ0=1;MQRankSum=-0.416;QD=19.85;ReadPosRankSum=2.379;VQSLOD=3.7880;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,12:12:33.11:467,33,0	0/0:5,0:5:15.05:0,15,265	0/0:9,0:9:19.47:0,19,368	0/0:17,0:17:42.10:0,42,694	1/1:31,0:31:68.86:254,69,0	0/0:17,0:17:51.16:0,51,871	0/0:8,0:8:21.07:0,21,371	0/0:32,0:31:96.29:0,96,1556	0/0:11,0:11:33.11:0,33,573	1/1:14,0:14:29.64:113,30,0	1/1:21,0:21:48.40:183,48,0	0/0:10,0:10:27.09:0,27,478	0/0:18,0:18:54.16:0,54,899	0/0:12,0:12:36.12:0,36,637	0/0:17,0:17:48.14:0,48,793	0/0:10,0:10:30.08:0,30,473	0/0:21,0:21:63.18:0,63,1052	0/0:9,0:9:24.06:0,24,383	0/0:20,0:20:60.18:0,60,960	0/0:26,0:26:78.24:0,78,1312	0/0:6,0:6:18.06:0,18,318	0/0:18,0:18:51.12:0,51,788	0/0:23,0:23:69.15:0,69,1075	0/0:10,0:10:30.08:0,30,501	0/0:21,0:21:60.21:0,60,1061	1/1:1,21:21:57.16:769,57,0	1/1:1,21:22:39.13:552,39,0	1/1:0,20:20:48.16:680,48,0
chr10	22697093	.	AT	A	3233.06	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=12.992;DP=460;FS=2.251;HRun=1;HaplotypeScore=49.7770;InbreedingCoeff=0.9938;MQ=81.62;MQ0=1;MQRankSum=-1.761;QD=23.09;ReadPosRankSum=2.516;VQSLOD=3.8409;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,0:12:31.63:165,32,0	0/0:5,0:5:15.05:0,15,214	0/0:10,0:10:26.99:0,27,333	0/0:18,0:18:48.15:0,48,648	1/1:0,31:31:90.18:1189,90,0	0/0:17,0:17:51.16:0,51,707	0/0:8,0:8:21.06:0,21,300	0/0:32,0:31:96.27:0,96,1278	0/0:11,0:11:33.10:0,33,454	1/1:0,14:14:39.12:528,39,0	1/1:0,21:21:63.02:806,63,0	0/0:9,0:9:27.09:0,27,386	0/0:18,0:18:54.17:0,54,752	0/0:12,0:12:36.12:0,36,513	0/0:16,0:16:48.15:0,48,667	0/0:10,0:10:30.07:0,30,390	0/0:21,0:21:63.17:0,63,855	0/0:9,0:9:24.08:0,24,329	0/0:21,0:21:63.14:0,63,815	0/0:26,0:26:78.22:0,78,1060	0/0:6,0:6:18.06:0,18,257	0/0:17,0:17:51.11:0,51,656	0/0:23,0:23:69.16:0,69,908	0/0:10,0:10:30.10:0,30,428	0/0:21,0:21:60.19:0,60,856	1/1:21,0:20:54.87:307,55,0	1/1:21,0:21:37.38:195,37,0	1/1:20,0:20:46:240,46,0
chr10	22699286	.	CAG	C	10271.26	PASS	AB=0.939;AC=21;AF=0.375;AN=56;BaseQRankSum=7.346;DP=1052;FS=0.549;HRun=0;HaplotypeScore=247.6636;InbreedingCoeff=0.9000;MQ=62.87;MQ0=12;MQRankSum=0.366;QD=26.20;ReadPosRankSum=4.058;VQSLOD=4.8502;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:62,1:63:99:0,126,2856	1/1:0,13:13:24.08:366,24,0	0/0:51,0:20:31.46:0,31,574	0/0:61,0:26:2.76:0,3,544	1/1:2,37:39:69.29:1018,69,0	0/0:20,0:20:57.16:0,57,1031	0/0:33,0:33:99:0,99,1658	0/0:46,0:44:99:0,126,2056	1/1:1,38:39:75.25:1145,75,0	1/1:2,45:46:99:1653,132,0	1/1:3,20:23:30.09:458,30,0	0/0:35,0:35:96.27:0,96,1747	0/0:29,0:29:81.18:0,81,1348	0/0:28,0:28:84.23:0,84,1485	0/0:44,0:44:99:0,126,2106	0/0:40,0:40:99:0,120,2040	1/1:2,35:37:69.70:1094,70,0	1/1:6,16:22:24.03:737,24,0	1/1:2,12:13:33.05:432,33,0	1/1:1,28:29:54.14:799,54,0	1/1:28,55:83:99:2556,189,0	0/0:46,0:46:99:0,132,2279	0/0:27,0:27:78.22:0,78,1403	0/0:65,0:65:99:0,174,3162	0/0:23,0:23:46.57:0,47,996	0/1:43,3:46:14.14:14,0,2009	0/0:28,0:28:84.06:0,84,1461	0/0:20,0:20:60.13:0,60,1014
chr10	22699369	.	TAC	T	1012.47	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=8.578;DP=1184;FS=2.797;HRun=0;HaplotypeScore=168.1374;InbreedingCoeff=0.8681;MQ=56.49;MQ0=29;MQRankSum=-4.311;QD=23.01;ReadPosRankSum=-4.348;VQSLOD=3.3111;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:62,1:64:92.66:0,93,2200	0/0:13,0:13:30.10:0,30,497	0/0:48,0:18:48.15:0,48,742	0/0:59,0:25:69.11:0,69,1005	0/0:47,0:47:99:0,114,1882	0/0:20,0:20:48.16:0,48,805	0/0:41,0:41:81.26:0,81,1339	1/1:5,39:39:96.11:1107,96,0	0/0:47,0:47:99:0,123,2060	0/0:56,0:56:99:0,141,2335	0/0:33,0:33:90.29:0,90,1486	0/0:47,0:47:99:0,120,1985	0/0:39,0:39:99:0,99,1566	0/0:50,1:51:99:0,106,2267	0/0:57,0:57:99:0,160,2663	0/0:47,0:47:99:0,129,2104	0/0:31,0:31:69.23:0,69,1143	0/0:21,0:22:8.34:0,8,697	0/0:28,0:27:72.23:0,72,1172	0/0:47,0:47:99:0,111,1858	0/0:104,0:103:99:0,247,4092	0/0:29,0:29:81.28:0,81,1358	0/0:34,0:34:90.29:0,90,1486	0/0:49,0:49:99:0,120,1977	0/0:25,0:25:69.23:0,69,1147	0/0:51,1:52:99:0,103,2243	0/0:21,0:21:60.18:0,60,953	0/0:27,2:29:7.17:0,7,1132
chr10	22699482	.	TAC	T	7878.71	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=15.338;DP=1212;FS=2.367;HRun=0;HaplotypeScore=153.3456;InbreedingCoeff=0.9852;MQ=56.81;MQ0=22;MQRankSum=8.110;QD=26.80;ReadPosRankSum=5.954;VQSLOD=6.0471;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,133,2182	1/1:2,23:24:60.19:790,60,0	0/0:55,0:30:70.92:0,71,1030	0/0:45,0:33:63.70:0,64,1149	0/0:56,0:56:99:0,153,2534	0/0:26,0:26:72.25:0,72,1233	0/0:29,0:29:78.24:0,78,1287	0/0:66,0:57:99:0,147,2394	1/1:3,47:49:99:1318,99,0	0/0:79,0:79:99:0,226,3772	0/0:25,0:25:69.19:0,69,1132	0/0:44,0:44:99:0,123,2060	0/0:30,0:30:84.29:0,84,1437	0/0:48,0:48:99:0,135,2260	0/0:55,0:55:99:0,147,2475	0/0:52,1:53:99:0,119,2438	1/1:3,20:22:42.14:553,42,0	1/1:5,23:28:7.53:666,8,0	1/1:4,13:14:24.08:319,24,0	1/1:1,34:33:72.24:959,72,0	1/1:11,105:114:99:3275,247,0	0/0:44,0:44:99:0,123,2130	0/0:39,0:39:99:0,114,1825	0/0:37,0:37:90.26:0,90,1479	0/0:42,0:42:99:0,111,1894	0/0:49,0:48:99:0,132,2177	0/0:27,0:27:81.26:0,81,1368	0/0:19,0:19:48.16:0,48,831
chr10	22699618	.	G	GCA	5628.76	PASS	AB=0.754;AC=19;AF=0.339;AN=56;BaseQRankSum=-5.992;DP=843;FS=4.612;HRun=0;HaplotypeScore=137.7989;InbreedingCoeff=0.2155;MQ=58.66;MQ0=24;MQRankSum=1.939;QD=13.73;ReadPosRankSum=-1.031;VQSLOD=4.0636;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:44:80.59:0,81,876	1/1:4,6:10:12.04:186,12,0	0/0:37,0:15:5.96:0,6,44	0/0:37,0:17:3.01:0,3,31	0/1:20,23:41:19.20:559,0,19	0/0:30,0:32:71.38:0,71,760	0/0:12,0:11:24.05:0,24,264	0/1:29,0:49:22.57:23,0,45	0/1:15,18:33:94.21:412,0,94	0/1:11,19:31:17.14:639,0,17	0/1:7,8:15:47.86:212,0,48	0/0:29,0:31:71:0,71,706	0/0:16,0:22:44.50:0,45,444	0/0:36,0:39:86.33:0,86,890	0/1:12,14:28:28.89:619,0,29	1/1:18,3:20:24.05:330,24,0	1/1:16,7:22:31.35:595,31,0	0/1:22,6:27:70.49:372,0,70	1/1:11,2:19:28.05:252,28,0	0/1:21,5:24:99:365,0,129	1/1:46,14:54:26.78:1018,27,0	0/0:29,0:32:47.59:0,48,459	0/0:28,0:28:0.78:0,1,407	0/0:35,0:35:66.16:0,66,734	0/1:16,2:20:48.48:48,0,343	0/0:34,1:36:11.52:0,12,495	0/0:30,0:31:33.64:0,34,698	0/0:12,0:13:29.92:0,30,323
chr10	22708772	.	TA	T	921.93	PASS	AB=0.743;AC=14;AF=0.250;AN=56;BaseQRankSum=3.231;DP=367;FS=5.892;HRun=12;HaplotypeScore=45.7564;InbreedingCoeff=0.7991;MQ=59.74;MQ0=1;MQRankSum=3.246;QD=10.60;ReadPosRankSum=2.755;VQSLOD=2.6137;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:45.07:0,45,445	1/1:1,5:6:14.94:116,15,0	0/0:11,0:7:11.99:0,12,109	0/0:8,0:6:8.81:0,9,86	0/0:2,0:17:14.38:0,14,79	0/0:12,0:13:26.89:0,27,258	0/0:11,0:11:18.01:0,18,174	0/0:7,0:10:17.23:0,17,103	1/1:1,8:10:25.93:192,26,0	0/0:5,0:18:33.21:0,33,186	0/0:5,0:15:23.86:0,24,127	0/0:11,0:11:20.98:0,21,197	0/0:14,0:14:33.03:0,33,324	0/0:16,0:16:35.90:0,36,324	0/0:12,0:12:21.04:0,21,213	0/1:12,2:14:7.39:7,0,296	1/1:4,10:13:26.89:209,27,0	1/1:1,6:7:17.92:139,18,0	0/1:4,6:11:7.23:121,0,7	1/1:4,10:14:29.86:232,30,0	1/1:5,6:11:11.92:93,12,0	0/0:20,0:20:51.07:0,51,502	0/0:19,1:20:21.73:0,22,368	0/0:10,0:10:29.89:0,30,288	0/0:19,0:19:15.86:0,16,320	0/0:10,0:10:18.04:0,18,183	0/0:9,0:9:21.04:0,21,213	0/0:12,0:11:21.03:0,21,207
chr10	22709937	.	G	GA	2671.86	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=-9.992;DP=474;FS=3.317;HRun=8;HaplotypeScore=45.6651;InbreedingCoeff=0.9025;MQ=75.67;MQ0=0;MQRankSum=-0.194;QD=21.72;ReadPosRankSum=0.877;VQSLOD=3.7971;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:39.01:0,39,357	1/1:1,8:9:21.06:242,21,0	0/0:13,0:12:16.85:0,17,163	0/1:12,0:11:12.33:12,0,90	0/0:19,0:19:54.03:0,54,494	0/0:23,0:25:64.09:0,64,561	0/0:12,0:12:33.02:0,33,302	0/0:25,0:25:66.03:0,66,601	1/1:0,12:12:36.11:415,36,0	0/0:19,0:19:57.02:0,57,518	0/0:29,0:29:84.03:0,84,764	0/0:13,0:13:36.02:0,36,330	0/0:11,0:11:24.01:0,24,220	0/0:8,0:8:24:0,24,215	0/0:23,0:23:62.99:0,63,568	0/0:18,0:18:51.02:0,51,466	1/1:1,14:15:30.56:346,31,0	1/1:0,11:11:27.08:312,27,0	1/1:3,12:16:38.95:430,39,0	1/1:10,21:31:35.72:664,36,0	1/1:1,16:17:39.12:450,39,0	0/0:10,0:10:24.01:0,24,220	0/0:15,1:16:10.39:0,10,345	0/0:20,0:20:54.02:0,54,494	0/0:18,0:18:45.01:0,45,408	0/0:18,0:18:54.03:0,54,494	0/0:26,0:25:66.03:0,66,604	0/0:14,0:14:33.02:0,33,302
chr10	22713090	.	AAAAG	A	1523.76	PASS	AB=1.000;AC=22;AF=0.393;AN=56;BaseQRankSum=10.729;DP=507;FS=2.207;HRun=0;HaplotypeScore=96.5937;InbreedingCoeff=0.6878;MQ=47.64;MQ0=9;MQRankSum=-5.936;QD=7.09;ReadPosRankSum=-2.937;VQSLOD=1.7121;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:33:78.10:0,78,1587	1/1:8,0:8:11.77:74,12,0	0/0:12,0:7:20.81:0,21,376	0/0:13,0:8:23.95:0,24,409	0/1:26,0:26:43.07:43,0,153	0/0:17,0:16:42.14:0,42,1001	0/0:16,0:14:36.09:0,36,794	1/1:28,0:27:20.17:158,20,0	1/1:6,3:8:20.87:235,21,0	0/1:21,0:21:27.56:28,0,112	0/1:13,0:13:12.04:12,0,23	0/0:20,0:20:60.14:0,60,1270	0/0:17,0:16:48.14:0,48,1008	0/0:18,0:18:45.15:0,45,1015	0/1:17,0:17:24.47:61,0,24	1/1:21,0:21:10.51:35,11,0	1/1:11,0:10:19.29:119,19,0	1/1:7,1:8:19.66:162,20,0	1/1:15,1:15:21.36:189,21,0	1/1:23,2:25:52.59:366,53,0	1/1:6,6:12:23.82:253,24,0	0/0:18,0:16:48.13:0,48,998	0/0:27,0:27:78.24:0,78,1745	0/0:22,0:22:66.22:0,66,1474	0/0:24,0:24:72.23:0,72,1629	0/0:21,0:20:56.89:0,57,1227	0/0:26,0:26:78.20:0,78,1635	0/0:6,0:6:18.03:0,18,332
chr10	22713091	.	AAAG	A	3557.04	PASS	AB=0.982;AC=24;AF=0.429;AN=56;BaseQRankSum=12.190;DP=510;FS=4.904;HRun=0;HaplotypeScore=83.2815;InbreedingCoeff=0.8749;MQ=47.91;MQ0=8;MQRankSum=-6.460;QD=16.39;ReadPosRankSum=-3.933;VQSLOD=2.4565;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:34:81.08:0,81,1355	1/1:1,7:8:9.92:142,10,0	0/0:12,0:7:20.74:0,21,310	0/0:13,0:8:23.91:0,24,360	0/1:26,1:27:3.19:181,0,3	0/0:17,0:16:42.14:0,42,823	0/0:17,0:15:39.04:0,39,666	1/1:24,4:27:59.33:455,59,0	1/1:5,4:8:23.99:300,24,0	0/1:20,0:20:7.70:82,0,8	1/1:14,0:14:13.45:70,13,0	0/0:20,0:20:60.14:0,60,1062	0/0:17,0:16:48.03:0,48,825	0/0:18,0:18:45.15:0,45,838	1/1:18,0:18:45.72:298,46,0	1/1:21,1:22:28.82:192,29,0	1/1:2,9:10:19.31:285,19,0	1/1:3,5:8:23.05:257,23,0	1/1:13,2:14:29.71:248,30,0	1/1:13,12:25:58.95:745,59,0	1/1:8,4:12:24.03:302,24,0	0/0:18,0:16:48.12:0,48,821	0/0:27,0:27:78.21:0,78,1426	0/0:22,0:22:66.17:0,66,1203	0/0:24,0:24:72.19:0,72,1339	0/0:21,0:20:52.80:0,53,996	0/0:26,0:26:78.20:0,78,1363	0/0:6,0:6:18.03:0,18,282
chr10	22713092	.	AAG	A	4129.14	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=11.238;DP=508;FS=3.297;HRun=0;HaplotypeScore=72.6958;InbreedingCoeff=0.9878;MQ=48.05;MQ0=7;MQRankSum=-6.847;QD=19.12;ReadPosRankSum=-4.208;VQSLOD=2.8249;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:34:81.04:0,81,1091	1/1:8,0:8:9.48:84,9,0	0/0:12,0:7:20.54:0,21,239	0/0:13,0:8:24.07:0,24,318	1/1:24,2:26:50.64:448,51,0	0/0:17,0:17:45.14:0,45,675	0/0:17,0:15:39.03:0,39,532	1/1:11,17:27:68.31:646,68,0	1/1:9,0:8:22.26:191,22,0	1/1:18,2:20:36.83:304,37,0	1/1:13,1:14:20.63:161,21,0	0/0:20,0:20:60.13:0,60,863	0/0:17,0:16:48.03:0,48,668	0/0:18,0:18:45.14:0,45,662	1/1:10,8:18:53.71:552,54,0	1/1:2,20:22:30.80:412,31,0	1/1:10,1:10:19.84:171,20,0	1/1:8,0:8:20.42:169,20,0	1/1:13,2:14:29.90:272,30,0	1/1:24,1:25:56.94:512,57,0	1/1:11,1:12:23.97:208,24,0	0/0:18,0:16:48.07:0,48,648	0/0:26,0:26:78.22:0,78,1146	0/0:22,0:22:65.69:0,66,952	0/0:24,0:24:71.72:0,72,1060	0/0:21,0:20:40.70:0,41,775	0/0:26,0:26:78.18:0,78,1096	0/0:6,0:6:18.03:0,18,234
chr10	22713093	.	AG	A	3859.97	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=11.407;DP=505;FS=3.267;HRun=1;HaplotypeScore=64.8485;InbreedingCoeff=0.9866;MQ=48.25;MQ0=7;MQRankSum=-6.923;QD=18.29;ReadPosRankSum=-4.934;VQSLOD=2.4030;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:34:80.71:0,81,842	1/1:7,1:8:9.83:68,10,0	0/0:12,0:7:20.20:0,20,169	0/0:13,0:8:23.90:0,24,225	1/1:21,6:27:68.89:586,69,0	0/0:16,0:16:45.12:0,45,521	0/0:16,0:14:38.95:0,39,403	1/1:22,4:25:64.63:501,65,0	1/1:8,1:8:21.72:150,22,0	1/1:10,9:19:49.75:495,50,0	1/1:1,12:13:20.97:228,21,0	0/0:21,0:21:60:0,60,662	0/0:17,0:16:48.01:0,48,523	0/0:18,0:18:45.06:0,45,503	1/1:14,4:18:53.84:474,54,0	1/1:21,1:22:32.92:265,33,0	1/1:10,1:10:20.64:144,21,0	1/1:8,0:8:21.14:144,21,0	1/1:13,1:13:29.81:221,30,0	1/1:21,4:25:57.99:417,58,0	1/1:11,0:11:23.80:168,24,0	0/0:19,0:17:46.75:0,47,472	0/0:26,0:26:78.20:0,78,889	0/0:22,0:22:56.17:0,56,709	0/0:25,0:25:67.56:0,68,804	0/0:20,1:20:15.62:0,16,575	0/0:27,0:27:77.80:0,78,849	0/0:6,0:6:18.02:0,18,189
chr10	22713238	.	TG	T	4321.67	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=14.708;DP=629;FS=1.708;HRun=2;HaplotypeScore=74.2413;InbreedingCoeff=0.9975;MQ=92.98;MQ0=0;MQRankSum=-1.785;QD=35.72;ReadPosRankSum=2.422;VQSLOD=5.5029;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:90.26:0,90,1321	1/1:1,8:9:21.07:272,21,0	0/0:20,0:20:53.86:0,54,727	0/0:38,0:38:99:0,108,1514	0/0:21,0:21:60.14:0,60,851	0/0:23,0:23:66.22:0,66,989	0/0:21,0:21:63.21:0,63,944	0/0:40,0:39:99:0,108,1617	1/1:1,13:13:33.11:428,33,0	0/0:28,0:28:72.24:0,72,1078	0/0:23,0:23:57.18:0,57,834	0/0:27,0:27:81.26:0,81,1195	0/0:26,0:26:75.25:0,75,1123	0/0:20,0:20:57.19:0,57,854	0/0:24,0:24:66.18:0,66,964	0/0:23,0:23:57.19:0,57,854	1/1:1,21:22:26.44:778,26,0	1/1:0,12:12:33.11:428,33,0	1/1:0,19:19:54.18:701,54,0	1/1:0,19:19:57.19:740,57,0	1/1:0,26:26:75.24:974,75,0	0/0:26,0:26:72.21:0,72,1054	0/0:19,0:19:51.03:0,51,650	0/0:27,0:27:81.26:0,81,1195	0/0:17,0:17:45.15:0,45,674	0/0:28,0:28:84.27:0,84,1219	0/0:21,0:21:60.20:0,60,899	0/0:6,0:6:18.06:0,18,270
chr10	22714573	.	T	TTATA	2604.67	PASS	AB=1.000;AC=26;AF=0.591;AN=44;BaseQRankSum=-0.676;DP=135;FS=7.623;HRun=0;HaplotypeScore=25.8227;InbreedingCoeff=0.5183;MQ=84.97;MQ0=1;MQRankSum=-2.053;QD=25.04;ReadPosRankSum=0.428;VQSLOD=1.4826;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,0:6:13.99:63,14,0	1/1:0,1:1:3.01:75,3,0	0/1:10,0:7:25.55:26,0,35	0/1:10,0:4:0:0,0,0	./.	0/0:1,0:1:3:0,3,25	0/0:1,0:1:3.01:0,3,52	1/1:12,16:28:54.18:1304,54,0	./.	./.	1/1:1,0:1:2.96:19,3,0	0/0:2,0:2:6.02:0,6,91	0/0:4,0:4:6.02:0,6,104	0/0:9,0:9:15.05:0,15,259	1/1:0,0:1:2.80:13,3,0	1/1:0,0:1:2.80:13,3,0	1/1:2,10:11:27.09:669,27,0	1/1:3,0:3:6.02:117,6,0	1/1:4,2:6:9.03:201,9,0	1/1:1,2:3:3.01:76,3,0	./.	./.	0/0:5,0:5:9.03:0,9,156	0/0:1,0:1:3.01:0,3,52	0/0:2,0:2:6.02:0,6,104	./.	1/1:1,0:5:11.19:51,11,0	1/1:2,0:17:27.98:126,28,0
chr10	22714599	.	A	AAT	695.64	PASS	AC=2;AF=0.059;AN=34;BaseQRankSum=-5.742;DP=119;FS=5.870;HRun=0;HaplotypeScore=31.1447;InbreedingCoeff=0.3062;MQ=88.23;MQ0=2;MQRankSum=-1.174;QD=23.19;ReadPosRankSum=-3.220;VQSLOD=2.1534;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:5:12.04:0,12,147	./.	./.	0/0:15,0:7:5.81:0,6,49	0/0:2,0:2:6.02:0,6,74	./.	./.	1/1:15,15:30:51.14:784,51,0	./.	./.	./.	0/0:1,0:1:3.01:0,3,37	0/0:2,0:2:6.02:0,6,74	0/0:5,0:5:9.03:0,9,111	0/0:1,0:1:3.01:0,3,37	./.	0/0:11,0:10:30.09:0,30,369	./.	0/0:5,0:5:12.04:0,12,148	0/0:1,0:1:3.01:0,3,37	./.	./.	0/0:3,0:3:3.01:0,3,37	0/0:1,0:1:3.01:0,3,37	0/0:2,0:2:6.01:0,6,62	0/0:2,0:2:6.02:0,6,74	0/0:8,0:8:21.05:0,21,246	0/0:15,0:15:21.07:0,21,258
chr10	22714926	.	TA	T	4060.89	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=11.481;DP=409;FS=0.435;HRun=7;HaplotypeScore=73.9078;InbreedingCoeff=0.9386;MQ=75.96;MQ0=3;MQRankSum=-4.673;QD=15.44;ReadPosRankSum=0.702;VQSLOD=3.5350;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:15:13.77:76,14,0	1/1:7,0:7:14.20:68,14,0	0/0:25,0:19:28.31:0,28,399	0/0:11,0:10:21.07:0,21,259	1/1:2,21:23:51.10:520,51,0	0/0:20,0:20:55.42:0,55,680	0/0:9,0:9:22.31:0,22,266	1/1:5,23:27:69.14:695,69,0	1/1:10,0:10:11.36:55,11,0	1/1:1,12:13:33.07:336,33,0	1/1:1,20:21:57.13:582,57,0	0/0:10,0:10:30.10:0,30,376	0/0:18,0:18:45.14:0,45,565	0/0:11,0:11:33.09:0,33,401	1/1:9,4:13:36.38:261,36,0	1/1:24,0:24:43.43:246,43,0	1/1:10,0:10:5.68:27,6,0	1/1:10,5:15:37.88:278,38,0	1/1:13,0:13:32.38:269,32,0	1/1:5,3:8:23.22:160,23,0	1/1:17,0:17:11.36:55,11,0	0/0:8,0:8:15.05:0,15,188	0/0:9,0:8:24.08:0,24,301	0/0:9,0:9:26.97:0,27,306	0/0:16,0:16:45.12:0,45,550	1/1:19,1:20:53.72:338,54,0	1/1:23,0:23:19.14:83,19,0	1/1:3,0:3:2.74:12,3,0
chr10	22714929	.	AAAAAC	A	5333.35	PASS	AB=1.000;AC=30;AF=0.536;AN=56;BaseQRankSum=8.903;DP=404;FS=0.882;HRun=0;HaplotypeScore=94.4888;InbreedingCoeff=0.6568;MQ=70.65;MQ0=5;MQRankSum=-6.284;QD=20.13;ReadPosRankSum=1.495;VQSLOD=4.2580;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,0:16:15.05:188,15,0	1/1:0,7:7:15.05:304,15,0	0/0:20,0:14:28.57:0,29,438	0/0:11,0:10:21.07:0,21,259	0/1:22,0:22:95.50:95,0,565	0/0:19,0:19:47.37:0,47,1179	0/0:8,0:8:24.08:0,24,593	0/1:29,0:27:78.88:458,0,79	1/1:1,9:10:12.04:243,12,0	0/1:13,0:13:86.02:86,0,310	0/1:20,0:20:72.84:73,0,480	0/0:11,0:11:33.11:0,33,811	0/0:18,0:18:45.15:0,45,1267	0/0:11,0:11:33.10:0,33,695	1/1:4,0:13:39.09:461,39,0	1/1:0,0:24:48.10:587,48,0	1/1:1,10:11:6.01:122,6,0	1/1:7,8:15:39.12:648,39,0	1/1:4,12:15:36.06:481,36,0	1/1:3,5:8:24.07:396,24,0	1/1:0,17:17:12.04:243,12,0	0/0:7,0:7:15.05:0,15,376	0/0:9,0:8:24.08:0,24,464	0/0:10,0:10:29.99:0,30,648	0/0:15,0:15:45.15:0,45,1036	1/1:1,0:20:16.93:631,17,0	1/1:0,0:21:20.86:279,21,0	1/1:0,0:3:3.01:40,3,0
chr10	22715030	.	GA	G	5898.05	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=11.971;DP=519;FS=1.979;HRun=9;HaplotypeScore=52.9188;InbreedingCoeff=0.9963;MQ=85.76;MQ0=0;MQRankSum=-1.579;QD=23.88;ReadPosRankSum=-1.308;VQSLOD=5.2105;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:54.16:0,54,623	1/1:1,5:6:15.01:137,15,0	0/0:20,0:19:36.08:0,36,393	0/0:21,0:19:39.05:0,39,405	1/1:1,26:27:77.99:705,78,0	0/0:16,0:16:48.14:0,48,554	0/0:13,0:13:30.09:0,30,346	1/1:3,28:31:83.98:750,84,0	1/1:4,6:10:21.01:192,21,0	1/1:3,39:42:99:1042,113,0	1/1:2,13:15:39.02:357,39,0	0/0:24,0:25:72.05:0,72,811	0/0:12,0:12:36.11:0,36,415	0/0:18,0:18:51.13:0,51,570	1/1:1,21:22:60.03:549,60,0	1/1:2,11:13:36.01:325,36,0	1/1:1,14:15:39.02:357,39,0	1/1:3,12:15:33.02:302,33,0	1/1:0,20:21:59.52:523,60,0	1/1:2,16:18:45.02:412,45,0	1/1:1,11:12:27.01:247,27,0	0/0:7,0:7:21.06:0,21,242	0/0:17,0:17:45.13:0,45,519	0/0:23,0:23:51.14:0,51,578	0/0:17,0:17:48.14:0,48,554	0/0:25,1:26:44.75:0,45,769	0/0:26,0:26:66.18:0,66,752	0/0:10,0:10:30.09:0,30,346
chr10	22715191	.	GA	G	5015.52	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=12.961;DP=520;FS=4.255;HRun=6;HaplotypeScore=51.3236;InbreedingCoeff=0.9695;MQ=71.72;MQ0=0;MQRankSum=0.290;QD=28.50;ReadPosRankSum=1.404;VQSLOD=5.4895;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:99:0,99,1252	1/1:1,3:4:9.02:96,9,0	0/0:11,0:11:4.28:0,4,85	0/0:13,0:11:24.68:0,25,306	1/1:4,23:27:75.66:806,76,0	0/0:17,0:17:51.15:0,51,656	0/0:10,0:10:27.09:0,27,355	0/0:24,0:24:54.18:0,54,710	1/1:1,13:14:39.10:419,39,0	1/1:1,15:16:45.11:483,45,0	1/1:2,25:27:69.17:741,69,0	0/0:23,0:23:66.20:0,66,854	0/0:20,0:20:57.19:0,57,750	0/0:12,0:12:36.12:0,36,473	0/0:23,0:23:66.20:0,66,854	0/0:23,0:23:66.21:0,66,868	1/1:2,21:23:54.14:580,54,0	1/1:1,14:15:42.11:451,42,0	1/1:0,15:15:45.09:473,45,0	1/1:2,16:18:45.11:483,45,0	1/1:3,14:17:45.11:482,45,0	0/0:17,0:17:45.15:0,45,591	0/0:17,0:17:51.17:0,51,671	0/0:26,0:26:78.24:0,78,1011	0/0:20,0:20:51.17:0,51,670	0/0:24,1:25:30.95:0,31,753	0/0:22,0:22:57.19:0,57,749	0/0:8,0:8:24.08:0,24,316
chr10	22715599	.	A	AACATTTT	9797.34	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-5.376;DP=695;FS=0.000;HRun=0;HaplotypeScore=158.9498;InbreedingCoeff=0.9984;MQ=79.59;MQ0=0;MQRankSum=-13.480;QD=89.07;ReadPosRankSum=-2.351;VQSLOD=4.9576;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:57.29:0,57,1477	0/0:12,0:12:36.12:0,36,875	0/0:26,0:26:57.18:0,57,1279	0/0:20,0:20:35.37:0,35,866	1/1:6,34:43:99:3847,108,0	0/0:28,0:28:75.26:0,75,1838	0/0:31,0:31:52.05:0,52,1839	0/0:27,0:27:72.22:0,72,1628	0/0:25,0:25:75.25:0,75,1808	1/1:4,19:25:72.21:2437,72,0	1/1:15,26:42:99:3513,105,0	0/0:16,0:16:42.14:0,42,1049	0/0:20,0:20:60.19:0,60,1418	0/0:28,0:28:81.24:0,81,1913	0/0:30,0:30:81.27:0,81,1969	0/0:21,0:21:57.17:0,57,1315	0/0:19,0:19:54.15:0,54,1278	0/0:8,0:8:24.06:0,24,529	0/0:18,0:18:51.14:0,51,1164	0/0:40,0:40:99:0,114,2724	0/0:18,0:18:51.16:0,51,1216	0/0:31,0:31:87.28:0,87,2085	0/0:32,0:32:93.31:0,93,2239	0/0:16,0:16:42.10:0,42,979	0/0:26,0:26:75.25:0,75,1823	0/0:25,0:25:69.24:0,69,1717	0/0:35,0:35:93.32:0,93,2297	0/0:10,0:10:24.08:0,24,599
chr10	22716458	.	G	GTTT	4800.99	PASS	AB=0.840;AC=21;AF=0.375;AN=56;BaseQRankSum=-5.832;DP=446;FS=4.757;HRun=10;HaplotypeScore=63.1636;InbreedingCoeff=0.8802;MQ=76.80;MQ0=1;MQRankSum=-2.145;QD=31.18;ReadPosRankSum=0.836;VQSLOD=3.9394;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:36.06:0,36,412	1/1:4,6:11:18.02:308,18,0	0/0:15,0:14:4.73:0,5,177	0/0:13,0:12:12.73:0,13,142	1/1:2,9:14:33.07:550,33,0	0/0:17,0:17:48.12:0,48,569	0/0:14,0:14:39.04:0,39,446	0/0:20,0:20:54.13:0,54,647	1/1:5,8:14:24.08:446,24,0	1/1:0,8:8:24.08:456,24,0	1/1:3,6:11:21.05:340,21,0	0/0:12,0:13:29.97:0,30,346	0/0:20,0:21:57.01:0,57,643	0/0:22,0:22:57.02:0,57,647	0/0:14,0:14:26.99:0,27,315	0/0:26,0:26:75.19:0,75,887	1/1:1,7:10:24.08:432,24,0	1/1:5,6:11:9.03:173,9,0	1/1:8,11:20:39.09:681,39,0	1/1:6,21:29:63.03:1025,63,0	1/1:0,4:5:15.03:254,15,0	0/0:11,0:12:9.94:0,10,329	0/0:21,0:22:59.07:0,59,653	0/0:9,0:9:27.06:0,27,314	0/0:19,0:19:57.17:0,57,693	0/1:17,3:21:99:135,0,512	0/0:30,0:30:63.06:0,63,753	0/0:12,0:12:27.05:0,27,328
chr10	22716859	.	CA	C	8409.17	PASS	AB=0.895;AC=29;AF=0.518;AN=56;BaseQRankSum=11.759;DP=714;FS=3.247;HRun=10;HaplotypeScore=71.6040;InbreedingCoeff=0.9540;MQ=72.49;MQ0=0;MQRankSum=-2.294;QD=21.90;ReadPosRankSum=3.442;VQSLOD=5.8533;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,25:27:74.98:651,75,0	1/1:1,12:13:35.99:313,36,0	0/1:15,1:17:0.11:0,0,246	0/0:9,0:9:9.01:0,9,89	0/0:34,1:36:70.02:0,70,966	0/0:27,2:29:49.12:0,49,747	0/0:18,0:18:54.08:0,54,566	1/1:4,30:34:85.20:748,85,0	1/1:2,22:24:65.98:573,66,0	0/0:28,0:28:69.18:0,69,757	0/0:32,2:34:35.16:0,35,827	0/0:13,2:15:16.02:0,16,385	0/0:26,0:26:66.18:0,66,730	0/0:37,0:37:96.19:0,96,1020	1/1:2,24:26:62.98:547,63,0	1/1:0,22:22:65.99:573,66,0	1/1:2,25:27:65.99:573,66,0	1/1:1,22:24:65.01:552,65,0	1/1:1,24:25:68.94:588,69,0	1/1:2,29:31:83.98:729,84,0	1/1:1,19:22:61.06:507,61,0	0/0:22,0:22:63.14:0,63,679	0/0:24,0:25:42.94:0,43,668	0/0:19,0:19:57.09:0,57,588	0/0:31,1:32:64.17:0,64,926	1/1:4,32:36:92.97:807,93,0	1/1:3,40:43:80.80:930,81,0	1/1:0,12:13:38.03:319,38,0
chr10	22718070	.	TGGA	T	13188.77	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=15.342;DP=671;FS=0.000;HRun=0;HaplotypeScore=102.0687;InbreedingCoeff=0.9880;MQ=89.57;MQ0=0;MQRankSum=-1.798;QD=42.41;ReadPosRankSum=1.443;VQSLOD=6.3029;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,111,2406	0/0:13,0:13:39.12:0,39,876	0/0:26,0:26:65.41:0,65,1565	0/0:27,0:28:75.20:0,75,1550	0/0:35,0:35:99:0,105,2378	1/1:1,24:25:66.18:1131,66,0	1/1:0,20:20:42.14:740,42,0	1/1:0,32:32:93.26:1481,93,0	0/0:15,0:15:42.13:0,42,830	0/0:22,0:22:66.23:0,66,1547	0/0:19,0:18:57.19:0,57,1279	1/1:0,26:26:66.14:1068,66,0	1/1:0,18:18:51.13:866,51,0	1/1:0,32:32:81.28:1384,81,0	0/0:30,0:30:87.30:0,87,2017	0/0:25,0:25:75.24:0,75,1707	0/0:22,0:22:63.20:0,63,1443	0/0:22,0:22:63.22:0,63,1477	0/0:15,0:15:45.13:0,45,1014	0/0:24,0:24:72.22:0,72,1550	0/0:25,0:25:66.21:0,66,1514	1/1:0,23:22:60.16:1009,60,0	1/1:0,24:24:60:976,60,0	1/1:1,23:24:50.69:833,51,0	1/1:1,18:19:45.11:745,45,0	1/1:2,25:27:7.24:1137,7,0	1/1:0,32:32:84.24:1448,84,0	1/1:0,9:9:21.07:370,21,0
chr10	22718879	.	TC	T	3841.41	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=20.168;DP=621;FS=0.636;HRun=1;HaplotypeScore=161.6011;InbreedingCoeff=0.9972;MQ=83.14;MQ0=2;MQRankSum=-18.447;QD=16.77;ReadPosRankSum=2.084;VQSLOD=3.9517;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,114,1796	0/0:8,0:8:24.08:0,24,384	0/0:24,0:24:69.19:0,69,1047	0/0:20,0:20:60.20:0,60,930	0/0:28,0:28:84.25:0,84,1295	1/1:1,13:14:41.14:250,41,0	1/1:1,14:16:47.04:293,47,0	1/1:0,13:17:49.81:304,50,0	0/0:30,0:30:90.31:0,90,1439	0/0:21,0:21:63.21:0,63,985	0/0:24,0:24:72.25:0,72,1149	1/1:0,17:19:49.95:306,50,0	1/1:1,19:22:60.77:357,61,0	1/1:1,19:20:58.83:362,59,0	0/0:30,0:30:90.31:0,90,1436	0/0:38,0:38:99:0,114,1823	0/0:34,0:34:99:0,102,1624	0/0:27,0:27:81.25:0,81,1270	0/0:16,0:16:48.15:0,48,726	0/0:23,0:23:66.22:0,66,1053	0/0:31,0:31:90.31:0,90,1429	1/1:1,18:20:58.01:344,58,0	1/1:3,14:17:46.09:260,46,0	1/1:3,6:9:14.72:91,15,0	1/1:1,15:17:46.97:289,47,0	1/1:2,28:31:91.24:561,91,0	1/1:0,16:16:44.07:267,44,0	1/1:0,9:9:26.37:157,26,0
chr10	22718882	.	GT	G	3025	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=20.023;DP=618;FS=1.371;HRun=1;HaplotypeScore=163.2714;InbreedingCoeff=0.9486;MQ=82.63;MQ0=3;MQRankSum=-19.460;QD=13.69;ReadPosRankSum=3.951;VQSLOD=3.3513;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,114,1778	0/0:8,0:8:24.08:0,24,384	0/0:22,0:22:63.19:0,63,975	0/0:21,0:21:62.54:0,63,917	0/0:28,0:28:81.28:0,81,1295	1/1:0,13:13:37.98:220,38,0	1/1:1,14:15:15.84:207,16,0	1/1:2,13:15:4.86:201,5,0	0/0:28,0:28:84.29:0,84,1343	0/0:21,0:21:63.21:0,63,1008	0/0:28,0:28:81.22:0,81,1201	1/1:1,17:18:49.67:287,50,0	1/1:2,19:21:49.55:295,50,0	1/1:1,19:20:58.36:338,58,0	0/0:30,0:30:90.29:0,90,1416	0/0:40,0:40:99:0,120,1896	0/0:34,0:34:99:0,102,1604	0/0:28,0:28:84.27:0,84,1315	0/0:17,0:17:51.17:0,51,809	0/0:24,0:24:71.46:0,71,1105	0/0:30,0:30:84.29:0,84,1343	1/1:1,19:20:37.73:280,38,0	1/1:3,14:16:2.55:166,3,0	1/1:0,6:6:14.48:79,14,0	1/1:3,15:18:13.51:224,14,0	1/1:3,28:30:88.46:555,88,0	1/1:1,16:17:32.17:240,32,0	1/1:1,9:9:26.38:157,26,0
chr10	22718885	.	GC	G	7179.85	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=20.027;DP=632;FS=1.738;HRun=2;HaplotypeScore=150.6893;InbreedingCoeff=0.9986;MQ=83.99;MQ0=3;MQRankSum=-19.536;QD=31.91;ReadPosRankSum=2.951;VQSLOD=4.4207;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,105,1573	0/0:9,0:9:27.08:0,27,383	0/0:24,0:24:66.16:0,66,913	0/0:22,0:22:63.16:0,63,885	0/0:30,0:30:90.27:0,90,1307	1/1:0,13:13:39.11:448,39,0	1/1:1,14:17:45.05:499,45,0	1/1:2,13:15:42.10:467,42,0	0/0:29,0:29:87.29:0,87,1303	0/0:25,0:25:75.25:0,75,1093	0/0:27,0:27:81.27:0,81,1209	1/1:3,17:20:57.17:658,57,0	1/1:3,19:22:66.11:719,66,0	1/1:1,19:20:60.15:679,60,0	0/0:32,0:32:96.29:0,96,1381	0/0:41,0:41:99:0,123,1843	0/0:34,0:34:99:0,102,1528	0/0:29,0:29:81.26:0,81,1194	0/0:18,0:18:48.16:0,48,712	0/0:24,0:24:69.23:0,69,1034	0/0:28,0:28:84.28:0,84,1256	1/1:0,18:19:57.16:647,57,0	1/1:1,15:16:45.09:499,45,0	1/1:1,6:7:18:192,18,0	1/1:0,15:16:45.06:502,45,0	1/1:1,30:30:90.26:1026,90,0	1/1:0,16:18:48.09:535,48,0	1/1:0,9:9:27.08:310,27,0
chr10	22719474	.	CT	C	5270.05	PASS	AB=0.794;AC=27;AF=0.482;AN=56;BaseQRankSum=-0.801;DP=590;FS=1.080;HRun=11;HaplotypeScore=74.9757;InbreedingCoeff=0.6889;MQ=74.25;MQ0=0;MQRankSum=-0.782;QD=15.10;ReadPosRankSum=3.698;VQSLOD=5.5961;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:31:76.41:0,76,405	0/0:9,0:9:18.05:0,18,192	0/1:22,1:19:27.50:27,0,166	0/1:15,0:13:10.57:11,0,115	0/0:4,1:22:26.79:0,27,222	1/1:4,11:17:8.04:251,8,0	0/1:3,16:19:16.03:297,0,16	1/1:9,19:29:55.92:449,56,0	0/0:25,1:26:47.54:0,48,711	0/0:9,0:23:50.94:0,51,276	0/0:5,0:26:66.77:0,67,419	1/1:3,25:28:68.91:566,69,0	1/1:1,21:22:53.93:443,54,0	0/1:4,18:23:1.61:301,0,2	0/0:2,1:19:21.21:0,21,207	0/0:15,0:15:32.29:0,32,377	0/1:21,2:23:1.79:2,0,427	0/0:27,0:27:78.11:0,78,799	0/0:15,0:15:29.91:0,30,302	0/0:12,1:14:17.28:0,17,364	0/0:11,1:14:11.11:0,11,291	1/1:0,13:13:32.95:271,33,0	1/1:4,22:26:27.95:436,28,0	1/1:4,14:18:38.93:320,39,0	1/1:2,24:26:65.92:542,66,0	1/1:4,20:24:56.89:465,57,0	1/1:3,31:36:64.98:718,65,0	1/1:0,7:7:20.98:172,21,0
chr10	22721040	.	TATATATATAC	T	9142.83	PASS	AB=1.000;AC=45;AF=0.900;AN=50;BaseQRankSum=1.382;DP=334;FS=3.243;HRun=0;HaplotypeScore=143.2145;InbreedingCoeff=0.4143;MQ=53.87;MQ0=7;MQRankSum=-2.546;QD=31.64;ReadPosRankSum=3.207;VQSLOD=4.6499;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:6:8.95:0,9,87	1/1:5,0:4:6.01:118,6,0	./.	0/0:20,0:7:1.55:0,2,4	1/1:18,0:19:27.09:632,27,0	1/1:10,15:25:29.46:766,29,0	./.	1/1:8,23:31:68.56:755,69,0	1/1:4,1:5:3.01:84,3,0	1/1:31,0:31:69.06:1368,69,0	1/1:18,0:18:18.06:427,18,0	1/1:1,8:9:15.03:452,15,0	1/1:3,9:12:14.83:422,15,0	1/1:2,6:8:12.04:379,12,0	1/1:5,3:8:9.03:216,9,0	1/1:3,4:7:15.05:418,15,0	1/1:11,1:12:12.01:211,12,0	0/1:5,0:5:6.15:6,0,67	1/1:14,3:16:27.47:632,27,0	1/1:4,2:6:6.02:149,6,0	1/1:2,0:2:3:25,3,0	1/1:5,1:6:6.01:120,6,0	1/1:1,8:9:6.02:190,6,0	./.	1/1:5,10:14:12.04:379,12,0	1/1:6,14:20:25.99:780,26,0	1/1:4,10:14:8.95:185,9,0	1/1:1,4:5:15.05:432,15,0
chr10	22722316	.	AT	A	3878.45	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-2.380;DP=641;FS=10.959;HRun=8;HaplotypeScore=86.6562;InbreedingCoeff=0.9978;MQ=75.52;MQ0=0;MQRankSum=-0.612;QD=25.35;ReadPosRankSum=0.403;VQSLOD=3.5701;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:42.13:0,42,507	1/1:1,10:11:24.01:231,24,0	0/0:20,0:20:38.92:0,39,498	0/0:9,0:9:18.72:0,19,237	0/0:31,1:32:55.27:0,55,940	0/0:27,1:28:46.25:0,46,841	0/0:14,0:14:39.12:0,39,467	0/0:29,0:29:78.24:0,78,942	1/1:3,22:25:60.09:579,60,0	0/0:24,0:24:60.17:0,60,713	0/0:29,0:29:84.26:0,84,1014	0/0:23,0:23:60.18:0,60,725	0/0:24,0:24:66.20:0,66,797	0/0:22,0:22:60.18:0,60,724	0/0:31,0:31:81.25:0,81,978	0/0:23,1:24:38.29:0,38,711	1/1:0,22:22:63.10:608,63,0	1/1:1,10:11:30.05:289,30,0	1/1:4,25:29:75.12:724,75,0	1/1:2,42:44:99:1215,126,0	1/1:1,10:11:24.04:232,24,0	0/0:24,0:24:69.20:0,69,824	0/0:24,0:24:69.21:0,69,834	0/0:17,0:17:51.16:0,51,616	0/0:18,0:18:51.16:0,51,616	0/0:21,0:21:54.17:0,54,652	0/0:33,0:33:96.26:0,96,1134	0/0:28,0:28:78.24:0,78,942
chr10	22722721	.	C	CCT	17141.16	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-2.771;DP=509;FS=12.058;HRun=0;HaplotypeScore=71.5902;InbreedingCoeff=0.9578;MQ=80.06;MQ0=0;MQRankSum=-4.835;QD=40.43;ReadPosRankSum=2.958;VQSLOD=6.2692;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:57.16:0,57,771	1/1:3,10:13:27.09:463,27,0	0/0:21,0:21:53.34:0,53,742	0/0:9,0:9:20.98:0,21,241	1/1:2,1:18:36.04:394,36,0	1/1:2,15:18:39.13:690,39,0	1/1:0,14:14:33.11:584,33,0	1/1:7,18:27:57.09:879,57,0	1/1:1,18:19:48.16:834,48,0	1/1:1,1:19:51.07:510,51,0	1/1:1,0:25:63.13:666,63,0	1/1:1,17:18:45.15:782,45,0	1/1:0,11:11:33.11:583,33,0	1/1:1,15:16:45.15:796,45,0	0/0:18,0:18:54.16:0,54,733	0/0:17,0:17:51.15:0,51,690	1/1:0,7:8:21.07:368,21,0	1/1:1,17:18:45.15:795,45,0	1/1:1,14:17:48.14:797,48,0	1/1:0,30:31:87.30:1539,87,0	1/1:0,11:11:30.10:531,30,0	1/1:0,16:16:45.15:779,45,0	1/1:1,32:33:66.07:1167,66,0	1/1:1,2:4:3.01:53,3,0	1/1:0,27:27:72.25:1274,72,0	1/1:0,19:20:60.19:1016,60,0	1/1:2,26:29:66.23:1163,66,0	1/1:2,10:12:27.09:478,27,0
chr10	22725286	.	TG	T	11475.03	PASS	AC=44;AF=0.815;AN=54;BaseQRankSum=6.502;DP=529;FS=1.526;HRun=7;HaplotypeScore=62.8700;InbreedingCoeff=0.9913;MQ=78.74;MQ0=0;MQRankSum=-3.088;QD=26.32;ReadPosRankSum=1.939;VQSLOD=5.6444;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:57.18:0,57,717	1/1:0,5:5:12.03:122,12,0	0/0:15,0:15:26.84:0,27,292	0/0:12,0:13:33.03:0,33,370	1/1:1,27:28:75.17:765,75,0	1/1:1,26:27:63.14:643,63,0	1/1:1,14:15:27.06:275,27,0	1/1:2,23:25:66.14:673,66,0	1/1:2,16:18:48.11:490,48,0	1/1:2,24:26:72.16:734,72,0	1/1:2,21:23:57.13:581,57,0	1/1:2,21:23:63.14:643,63,0	1/1:0,26:26:72.16:735,72,0	1/1:2,14:16:39.09:398,39,0	0/0:23,0:23:51.16:0,51,642	0/0:20,0:20:51.16:0,51,640	1/1:1,13:14:33.08:337,33,0	1/1:0,9:9:24.05:245,24,0	1/1:0,15:15:45.10:458,45,0	1/1:3,30:33:81.17:826,81,0	1/1:1,10:11:27.06:275,27,0	1/1:2,11:13:30.07:306,30,0	1/1:1,22:23:60.14:612,60,0	1/1:0,12:12:33.08:337,33,0	1/1:1,18:19:54.12:551,54,0	1/1:5,19:24:57.12:582,57,0	1/1:1,30:31:87.20:888,87,0	./.
chr10	22726599	.	CT	C	4960.35	PASS	AB=0.827;AC=28;AF=0.500;AN=56;BaseQRankSum=13.163;DP=499;FS=15.950;HRun=10;HaplotypeScore=50.2052;InbreedingCoeff=0.7642;MQ=73.17;MQ0=0;MQRankSum=0.161;QD=17.53;ReadPosRankSum=0.772;VQSLOD=3.8192;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:27.07:0,27,299	0/0:10,0:10:27.07:0,27,299	0/1:16,0:15:0.20:0,0,152	0/1:7,1:7:12.76:42,0,13	0/0:30,0:30:78.21:0,78,863	1/1:6,16:22:14.80:358,15,0	1/1:2,11:13:29.99:260,30,0	1/1:3,25:28:68.94:595,69,0	0/0:14,0:14:36.08:0,36,389	0/0:17,0:17:42.11:0,42,465	0/0:13,0:14:32.91:0,33,337	1/1:1,14:15:38.99:339,39,0	1/1:0,17:17:44.99:391,45,0	1/1:2,14:16:38.99:339,39,0	0/0:23,0:23:63.16:0,63,689	0/0:22,0:22:63.17:0,63,697	0/0:15,0:15:42.09:0,42,455	0/1:8,2:11:6.61:7,0,177	0/0:18,0:19:32.92:0,33,346	0/0:25,2:27:37.41:0,37,629	0/0:12,0:12:33.06:0,33,354	1/1:3,16:19:41.97:364,42,0	1/1:5,27:32:77.96:677,78,0	1/1:1,9:10:23.99:208,24,0	1/1:2,12:14:29.98:260,30,0	0/1:5,15:20:15.38:340,0,15	1/1:5,22:27:59.98:521,60,0	1/1:3,12:15:29.99:260,30,0
chr10	22727189	.	C	CA	12886.71	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-9.589;DP=395;FS=3.494;HRun=4;HaplotypeScore=32.6443;InbreedingCoeff=0.9729;MQ=79.85;MQ0=0;MQRankSum=-4.419;QD=37.79;ReadPosRankSum=4.105;VQSLOD=4.0171;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:27.08:0,27,306	1/1:0,3:3:9.03:123,9,0	0/0:13,0:13:39.01:0,39,404	0/0:7,0:7:13.59:0,14,140	1/1:2,28:29:87.29:1187,87,0	1/1:0,18:18:54.18:739,54,0	1/1:0,7:7:21.07:287,21,0	1/1:1,22:23:66.20:884,66,0	1/1:0,5:5:15.05:205,15,0	1/1:1,18:19:51.15:680,51,0	1/1:1,20:21:57.15:759,57,0	1/1:3,12:15:30.10:410,30,0	1/1:1,10:11:30.10:410,30,0	1/1:0,6:6:18.06:246,18,0	0/0:11,0:11:33.09:0,33,374	0/0:13,0:13:36.09:0,36,399	1/1:1,15:16:48.16:657,48,0	1/1:1,18:19:42.14:574,42,0	1/1:1,16:17:48.15:640,48,0	1/1:1,19:20:60.20:817,60,0	1/1:0,10:10:30.10:410,30,0	1/1:0,7:7:21.07:287,21,0	1/1:1,14:15:42.14:574,42,0	1/1:1,8:9:24.08:328,24,0	1/1:0,22:22:57.19:780,57,0	1/1:0,18:18:54.18:739,54,0	1/1:0,12:12:30.10:410,30,0	1/1:0,18:18:54.18:739,54,0
chr10	22727795	.	G	GT	12496.97	PASS	AB=0.583;AC=50;AF=0.893;AN=56;BaseQRankSum=-5.383;DP=538;FS=12.201;HRun=10;HaplotypeScore=49.5928;InbreedingCoeff=0.4448;MQ=74.44;MQ0=0;MQRankSum=-3.296;QD=24.08;ReadPosRankSum=3.384;VQSLOD=4.7607;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,21:25:57.14:608,57,0	1/1:2,7:9:21.05:224,21,0	0/0:11,0:11:8.96:0,9,71	0/0:8,0:8:1.58:0,2,60	1/1:4,22:26:63.16:672,63,0	1/1:3,30:33:58.24:809,58,0	1/1:2,11:13:24.06:256,24,0	1/1:7,29:36:84.15:868,84,0	1/1:1,14:15:33.08:352,33,0	1/1:3,24:27:69.12:716,69,0	0/1:6,13:19:10.17:312,0,10	0/1:2,6:8:3.57:171,0,4	1/1:4,20:24:57.14:606,57,0	1/1:7,20:27:60.15:640,60,0	1/1:5,19:24:54.14:576,54,0	1/1:0,17:17:51.13:544,51,0	1/1:3,22:26:62.99:654,63,0	1/1:4,10:14:24.06:256,24,0	1/1:4,18:22:23.44:440,23,0	1/1:1,21:22:63.05:645,63,0	1/1:5,9:14:24.06:256,24,0	1/1:2,15:17:42.11:448,42,0	1/1:4,18:22:1.84:431,2,0	1/1:1,9:10:24.06:256,24,0	1/1:3,14:17:39.10:416,39,0	1/1:1,22:23:66.16:696,66,0	1/1:5,14:19:39.10:415,39,0	1/1:1,8:10:2.42:231,2,0
chr10	22728686	.	GT	G	6037.74	PASS	AB=0.583;AC=25;AF=0.446;AN=56;BaseQRankSum=3.625;DP=536;FS=4.567;HRun=8;HaplotypeScore=61.2219;InbreedingCoeff=0.9121;MQ=70.07;MQ0=0;MQRankSum=-2.062;QD=23.49;ReadPosRankSum=2.557;VQSLOD=5.6363;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:51.14:0,51,604	0/0:6,0:6:18.06:0,18,217	0/0:14,0:13:29.28:0,29,357	0/0:9,0:9:9.41:0,9,173	0/0:3,0:33:89.37:0,89,474	1/1:2,24:25:60.09:579,60,0	1/1:1,15:16:36.06:348,36,0	1/1:3,21:24:63.08:597,63,0	0/0:14,0:14:39.12:0,39,471	0/0:0,0:24:69.06:0,69,357	0/0:0,0:28:80.53:0,81,414	1/1:1,13:14:27.04:261,27,0	1/1:4,16:20:48.07:463,48,0	1/1:2,16:18:45.07:434,45,0	0/0:23,0:23:57.17:0,57,688	0/0:22,0:22:60.18:0,60,725	0/0:24,0:24:66.19:0,66,779	0/0:21,0:21:60.17:0,60,712	0/0:14,0:14:39.12:0,39,471	0/0:25,0:25:72.21:0,72,858	0/0:4,0:4:9.03:0,9,109	1/1:2,24:26:66.10:636,66,0	1/1:1,16:17:42.07:406,42,0	0/1:2,5:7:18.21:127,0,18	1/1:3,21:24:63.10:608,63,0	1/1:2,18:20:54.04:507,54,0	1/1:5,30:35:81.12:782,81,0	1/1:0,10:10:30.05:290,30,0
chr10	22729421	.	G	GAAGA	5163.20	PASS	AB=1.000;AC=49;AF=0.942;AN=52;BaseQRankSum=-4.395;DP=486;FS=0.000;HRun=0;HaplotypeScore=155.4123;InbreedingCoeff=0.0298;MQ=49.70;MQ0=6;MQRankSum=0.654;QD=11.03;ReadPosRankSum=-2.245;VQSLOD=4.1873;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:22:0.50:148,0,0	1/1:13,0:13:4.22:83,4,0	./.	./.	1/1:16,11:30:36.11:534,36,0	1/1:26,0:28:45.10:645,45,0	1/1:16,0:16:15.01:222,15,0	1/1:33,0:31:16.72:184,17,0	0/1:21,0:21:49.89:108,0,50	1/1:13,0:13:9.03:164,9,0	1/1:15,0:18:27.08:463,27,0	1/1:19,0:22:6.57:481,7,0	1/1:13,8:22:6.02:126,6,0	1/1:19,0:19:30.06:387,30,0	0/1:17,0:17:1.92:23,0,2	1/1:13,0:13:9.88:222,10,0	1/1:31,0:30:21.21:153,21,0	1/1:12,0:12:5.96:43,6,0	1/1:7,0:6:2.98:21,3,0	1/1:17,0:17:17.69:99,18,0	0/1:8,0:8:0:0,0,0	1/1:12,0:14:21.06:369,21,0	1/1:21,0:21:14.35:175,14,0	1/1:13,0:13:5.66:35,6,0	1/1:18,0:19:12.03:201,12,0	1/1:17,0:17:1.66:15,2,0	1/1:15,0:15:15.44:158,15,0	1/1:6,0:6:9:105,9,0
chr10	22729459	.	AGGG	A	646.34	PASS	AB=0.851;AC=11;AF=0.196;AN=56;BaseQRankSum=7.527;DP=539;FS=17.263;HRun=5;HaplotypeScore=137.2273;InbreedingCoeff=-0.2343;MQ=55.35;MQ0=8;MQRankSum=-5.569;QD=3.55;ReadPosRankSum=-2.334;VQSLOD=-0.7127;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:19,3:22:89.07:89,0,747	0/1:5,4:9:99:157,0,210	0/0:41,0:16:45.11:0,45,951	0/0:37,0:10:27.02:0,27,416	0/0:30,0:30:26:0,26,1224	0/0:32,0:33:59.89:0,60,1859	0/0:23,0:23:54.17:0,54,1162	0/0:26,0:27:69.57:0,70,1468	0/1:12,0:16:99:119,0,428	0/0:14,0:14:36.12:0,36,816	0/0:14,0:14:35.62:0,36,680	0/0:22,0:22:18.11:0,18,1073	0/0:18,0:18:24.07:0,24,500	0/0:18,1:19:16.66:0,17,934	0/1:12,0:15:99:101,0,571	0/1:12,1:15:99:146,0,607	0/1:21,5:26:39.83:40,0,781	0/0:5,1:6:12.04:0,12,194	0/0:10,0:10:27.03:0,27,375	0/1:17,1:19:41.41:41,0,706	0/0:10,1:11:30.10:0,30,460	0/0:13,0:13:36.08:0,36,713	0/1:18,3:21:75.38:75,0,1035	0/1:13,1:14:6.69:7,0,851	0/0:19,0:21:22.16:0,22,735	0/0:17,0:18:15.57:0,16,938	0/1:14,1:15:11.29:11,0,721	0/1:8,2:10:4.42:4,0,459
chr10	22729814	.	AT	A	7914.40	PASS	AB=0.885;AC=34;AF=0.607;AN=56;BaseQRankSum=10.975;DP=567;FS=1.950;HRun=10;HaplotypeScore=59.9460;InbreedingCoeff=0.8345;MQ=76.97;MQ0=0;MQRankSum=-1.742;QD=20.56;ReadPosRankSum=0.821;VQSLOD=5.7940;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,1:22:31.57:0,32,573	0/0:7,0:7:21.06:0,21,232	0/1:11,1:12:8.57:9,0,177	0/0:13,0:13:31.20:0,31,289	1/1:3,31:34:86.96:755,87,0	1/1:1,21:22:50.99:443,51,0	1/1:1,12:14:4.85:259,5,0	1/1:4,22:26:65.97:573,66,0	0/0:27,0:27:63.17:0,63,695	1/1:1,29:31:89.01:758,89,0	1/1:2,21:23:34.79:469,35,0	1/1:0,25:25:71.99:625,72,0	1/1:3,19:23:53.02:449,53,0	1/1:2,21:23:29.81:488,30,0	0/0:25,0:25:75.20:0,75,823	0/0:30,0:30:78.21:0,78,863	0/0:14,0:14:39.11:0,39,431	0/0:5,0:5:12.02:0,12,123	0/0:18,0:18:45.12:0,45,498	0/0:21,0:21:57.15:0,57,631	0/1:8,2:11:22.20:22,0,217	1/1:1,21:22:59.99:521,60,0	1/1:5,23:28:32.78:513,33,0	1/1:1,11:12:26.99:234,27,0	1/1:3,14:17:38.66:338,39,0	1/1:1,17:18:50.98:443,51,0	1/1:1,37:38:99:885,102,0	1/1:1,5:6:14.99:130,15,0
chr10	22731159	.	C	CT	29554.43	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-3.158;DP=759;FS=7.538;HRun=1;HaplotypeScore=112.5036;InbreedingCoeff=0.9840;MQ=72.82;MQ0=0;MQRankSum=-6.461;QD=41.22;ReadPosRankSum=5.856;VQSLOD=3.7807;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,42:44:99:1664,111,0	1/1:1,11:12:30.10:449,30,0	0/0:19,0:18:50.99:0,51,602	0/0:23,0:22:59.96:0,60,707	1/1:1,27:28:81.23:1182,81,0	1/1:0,23:23:60.20:899,60,0	1/1:1,28:29:81.27:1214,81,0	1/1:1,21:22:63.21:945,63,0	1/1:1,23:24:63.21:944,63,0	1/1:1,28:29:84.27:1237,84,0	1/1:0,28:28:81.23:1189,81,0	1/1:1,29:30:81.27:1214,81,0	1/1:1,41:42:99:1784,120,0	1/1:0,26:26:78.26:1169,78,0	1/1:1,51:52:99:2202,147,0	1/1:1,35:36:99:1484,99,0	1/1:2,15:17:45.15:674,45,0	1/1:0,12:12:33.11:495,33,0	1/1:0,17:17:51.16:745,51,0	1/1:0,37:37:99:1523,105,0	1/1:0,38:38:99:1618,108,0	1/1:0,27:27:75.25:1123,75,0	1/1:2,30:32:81.27:1214,81,0	1/1:0,17:17:42.14:629,42,0	1/1:0,25:25:69.23:1034,69,0	1/1:1,28:29:84.27:1238,84,0	1/1:4,33:36:99:1502,102,0	1/1:0,4:4:12.04:180,12,0
chr10	22734400	.	C	CA	15487.84	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-3.616;DP=606;FS=0.000;HRun=6;HaplotypeScore=75.7308;InbreedingCoeff=0.9844;MQ=75.76;MQ0=0;MQRankSum=-2.090;QD=30.73;ReadPosRankSum=1.175;VQSLOD=5.2681;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:54.09:0,54,543	1/1:0,13:13:36.12:453,36,0	0/0:17,0:17:8.87:0,9,254	0/0:16,0:16:28.88:0,29,257	1/1:6,28:34:78.25:978,78,0	1/1:1,17:18:48.15:604,48,0	1/1:2,18:20:39.12:488,39,0	1/1:5,32:37:93.28:1154,93,0	1/1:2,16:18:48.15:603,48,0	1/1:4,29:33:87.24:1076,87,0	1/1:3,21:24:63.16:775,63,0	1/1:0,17:17:42.13:528,42,0	1/1:1,19:20:51.16:642,51,0	1/1:2,18:20:45.14:565,45,0	0/0:21,0:21:57.11:0,57,573	0/0:23,0:23:66.15:0,66,673	1/1:1,16:17:39.12:491,39,0	1/1:2,11:13:30.10:377,30,0	1/1:3,19:22:57.16:700,57,0	1/1:3,36:39:99:1280,102,0	1/1:3,10:13:33.11:415,33,0	1/1:2,14:16:33.11:415,33,0	1/1:4,10:14:30.10:377,30,0	1/1:2,15:16:42.13:528,42,0	1/1:5,30:35:87.28:1095,87,0	1/1:1,20:20:54.15:664,54,0	1/1:7,28:35:81.26:1017,81,0	1/1:0,8:8:21.07:264,21,0
chr10	22734608	.	GTGTA	G	5626.60	PASS	AB=1.000;AC=45;AF=0.865;AN=52;BaseQRankSum=8.898;DP=710;FS=4.121;HRun=0;HaplotypeScore=130.6827;InbreedingCoeff=0.5630;MQ=65.27;MQ0=2;MQRankSum=0.349;QD=10.03;ReadPosRankSum=-0.869;VQSLOD=4.1294;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:26,5:31:24.08:353,24,0	1/1:7,4:11:2.86:46,3,0	./.	./.	0/0:35,0:35:60.19:0,60,1276	1/1:18,10:28:12.04:184,12,0	1/1:18,1:19:6.02:90,6,0	0/0:36,0:35:0:0,0,0	1/1:14,15:28:24.08:368,24,0	0/0:34,0:34:45.15:0,45,1034	0/1:19,0:20:15.25:15,0,577	1/1:11,9:20:18.06:276,18,0	1/1:22,18:40:33.11:505,33,0	1/1:10,14:25:30.10:442,30,0	1/1:16,0:35:9.01:84,9,0	1/1:8,0:19:9.01:84,9,0	1/1:18,9:26:15.05:230,15,0	1/1:11,8:19:9.02:138,9,0	1/1:16,7:22:21.07:318,21,0	1/1:22,12:34:27.08:395,27,0	1/1:15,17:32:18.06:276,18,0	1/1:13,10:23:9.03:138,9,0	1/1:16,10:27:14.99:212,15,0	1/1:7,9:16:21.07:322,21,0	1/1:10,18:29:33.11:487,33,0	1/1:15,7:23:21.02:298,21,0	1/1:15,12:27:21.07:322,21,0	1/1:3,1:4:3.01:46,3,0
chr10	22736673	.	TACAAACAAACAA	T	10000.32	PASS	AB=0.716;AC=28;AF=0.500;AN=56;BaseQRankSum=6.212;DP=513;FS=0.000;HRun=0;HaplotypeScore=193.1011;InbreedingCoeff=0.5940;MQ=60.65;MQ0=1;MQRankSum=-12.812;QD=37.45;ReadPosRankSum=1.568;VQSLOD=4.0704;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:20:33.11:0,33,849	0/1:3,0:7:0.46:0,0,37	0/0:21,0:17:24.08:0,24,1225	0/0:19,0:14:21.07:0,21,749	0/0:33,0:33:72.23:0,72,3808	1/1:10,18:28:45.15:1565,45,0	1/1:7,13:20:17.92:625,18,0	0/1:23,0:23:89.27:89,0,98	0/1:4,0:11:1.87:2,0,91	0/0:18,0:18:39.13:0,39,2036	0/0:31,0:32:69.24:0,69,3653	1/1:3,12:15:27.09:939,27,0	1/1:11,12:23:36.12:1252,36,0	1/1:2,8:10:18.06:626,18,0	0/0:9,0:32:60.21:0,60,1589	0/0:6,0:20:36.12:0,36,926	0/0:8,0:16:2.50:0,3,137	0/0:8,0:10:3.78:0,4,140	0/1:10,0:22:9.94:10,0,125	0/0:7,0:25:16.25:0,16,239	0/1:6,0:10:1.23:1,0,65	1/1:10,8:18:21.07:663,21,0	1/1:6,8:14:19.91:728,20,0	1/1:5,5:10:8.77:225,9,0	1/1:6,11:17:23.09:1057,23,0	0/1:11,9:20:99:965,0,143	1/1:6,11:17:30.10:1043,30,0	1/1:0,2:2:6.02:209,6,0
chr10	22738451	.	C	CAAAA	6551.40	PASS	AB=1.000;AC=50;AF=0.893;AN=56;BaseQRankSum=-1.064;DP=449;FS=5.411;HRun=15;HaplotypeScore=126.6069;InbreedingCoeff=0.4420;MQ=70.79;MQ0=1;MQRankSum=-1.298;QD=15.60;ReadPosRankSum=-1.847;VQSLOD=2.2316;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:10,0:10:14.06:140,0,14	1/1:8,0:8:9.01:138,9,0	0/0:19,0:15:9.46:0,9,83	0/0:9,0:8:2.44:0,2,27	1/1:26,0:30:51.53:558,52,0	1/1:14,0:16:35.96:481,36,0	1/1:12,0:16:11.97:140,12,0	1/1:18,2:23:38.21:479,38,0	1/1:6,5:12:6.02:104,6,0	1/1:7,0:16:35.82:350,36,0	1/1:7,0:25:18.08:385,18,0	1/1:14,0:14:15.04:199,15,0	1/1:17,0:16:32.93:465,33,0	1/1:22,0:21:32.99:401,33,0	1/1:7,0:16:0.28:3,0,0	1/1:14,0:16:10.07:245,10,0	1/1:4,0:10:3.01:37,3,0	0/1:8,0:7:0:0,0,0	1/1:9,0:18:38.89:501,39,0	1/1:15,6:27:36.49:452,36,0	1/1:5,0:15:5.93:75,6,0	1/1:4,0:7:7.70:41,8,0	1/1:8,0:14:5.97:74,6,0	1/1:6,0:4:12.01:151,12,0	1/1:7,9:17:9.03:161,9,0	1/1:12,5:19:28.53:351,29,0	1/1:25,0:25:30.01:445,30,0	1/1:8,0:8:12.04:174,12,0
chr10	22739002	.	TAC	T	922.47	PASS	AB=0.888;AC=26;AF=0.520;AN=50;BaseQRankSum=-2.376;DP=554;FS=0.000;HRun=0;HaplotypeScore=86.9024;InbreedingCoeff=0.4109;MQ=70.72;MQ0=13;MQRankSum=1.657;QD=3.27;ReadPosRankSum=-0.391;VQSLOD=1.9545;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:22:23.87:0,24,231	0/1:5,1:6:22.98:23,0,47	./.	./.	0/0:19,0:18:5.84:0,6,49	0/1:25,0:26:1.54:132,0,2	1/1:13,5:18:9.02:96,9,0	./.	0/1:20,1:20:16.98:17,0,99	0/0:16,0:16:23.75:0,24,226	0/0:10,0:17:2.74:0,3,12	0/1:14,5:19:22.95:55,0,23	1/1:14,0:15:14.94:109,15,0	1/1:13,7:22:14.70:124,15,0	0/1:11,5:16:13.94:14,0,184	0/0:25,0:25:32.88:0,33,374	0/0:26,0:25:7.12:0,7,421	0/1:13,0:12:12.54:13,0,96	0/0:27,0:26:21.01:0,21,193	0/0:32,0:32:38.90:0,39,363	0/0:16,0:14:14.99:0,15,145	1/1:9,11:19:8.69:75,9,0	1/1:9,11:21:12.10:110,12,0	1/1:14,13:27:13.11:113,13,0	1/1:12,0:12:9.30:64,9,0	1/1:17,0:17:8.98:75,9,0	1/1:15,5:20:6.38:62,6,0	1/1:7,0:6:2.97:20,3,0
chr10	22741393	.	G	GC	9740.54	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=10.507;DP=753;FS=3.234;HRun=6;HaplotypeScore=153.9646;InbreedingCoeff=0.9980;MQ=86.54;MQ0=0;MQRankSum=-0.725;QD=31.94;ReadPosRankSum=1.188;VQSLOD=2.6229;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,120,1218	0/0:11,0:11:33.05:0,33,328	0/0:27,0:27:54.02:0,54,524	0/0:33,0:33:77.34:0,77,753	0/0:36,0:36:99:0,102,1022	1/1:2,17:19:48.15:602,48,0	1/1:2,35:37:96:1207,96,0	1/1:4,33:36:99:1225,99,0	0/0:18,0:18:48.08:0,48,476	0/0:31,0:31:87.19:0,87,887	0/0:27,0:27:78.18:0,78,795	1/1:2,13:15:39.08:473,39,0	1/1:3,21:25:60.18:753,60,0	1/1:2,28:30:78.25:981,78,0	0/0:51,0:51:99:0,141,1438	0/0:37,0:37:99:0,102,1041	0/0:31,0:31:87.15:0,87,871	0/0:13,0:13:36.08:0,36,367	0/0:23,0:23:66.14:0,66,669	0/0:21,0:21:60.14:0,60,612	0/0:44,0:44:99:0,114,1163	1/1:2,18:20:54.17:678,54,0	1/1:0,13:13:39.12:490,39,0	1/1:1,30:31:72.23:906,72,0	1/1:2,21:23:60.19:753,60,0	1/1:6,24:30:17.01:843,17,0	1/1:2,15:17:45.14:566,45,0	1/1:0,8:8:21.07:264,21,0
chr10	22742870	.	AT	A	9227.29	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=9.852;DP=549;FS=0.000;HRun=8;HaplotypeScore=78.0046;InbreedingCoeff=0.9789;MQ=75.49;MQ0=0;MQRankSum=-1.640;QD=24.54;ReadPosRankSum=0.490;VQSLOD=5.3883;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:51.16:0,51,616	1/1:0,8:8:24.04:232,24,0	0/0:18,0:18:31.87:0,32,320	0/0:13,0:12:27.06:0,27,309	0/0:33,0:33:93.28:0,93,1114	1/1:1,17:18:48.08:464,48,0	1/1:3,9:12:27.04:261,27,0	1/1:4,24:28:72.06:677,72,0	1/1:1,19:20:51.08:492,51,0	0/0:19,0:19:42.12:0,42,499	0/0:30,0:30:84.25:0,84,1000	1/1:1,20:21:57.09:550,57,0	1/1:1,22:23:66.11:637,66,0	1/1:3,12:15:30.05:289,30,0	0/0:18,0:18:45.14:0,45,543	0/0:24,0:24:66.15:0,66,761	1/1:1,10:11:27.04:261,27,0	1/1:2,9:11:24.03:232,24,0	1/1:2,17:19:48.01:449,48,0	1/1:1,34:35:99:955,99,0	1/1:2,6:8:18.03:174,18,0	1/1:0,21:21:60.09:578,60,0	1/1:5,26:31:72.11:695,72,0	1/1:0,9:9:21.03:203,21,0	1/1:0,26:26:66.11:637,66,0	1/1:5,19:24:23.85:514,24,0	1/1:1,33:34:90.15:869,90,0	1/1:0,2:2:6.01:58,6,0
chr10	22743003	.	TGATAGATA	T	4371.67	PASS	AB=0.950;AC=44;AF=0.880;AN=50;BaseQRankSum=-0.661;DP=471;FS=6.091;HRun=0;HaplotypeScore=169.0980;InbreedingCoeff=0.3075;MQ=52.20;MQ0=1;MQRankSum=-1.542;QD=10.96;ReadPosRankSum=-0.744;VQSLOD=3.1349;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:25:1.44:53,1,0	1/1:4,0:12:12.04:203,12,0	./.	./.	1/1:13,9:22:3.01:62,3,0	1/1:12,5:17:12.04:295,12,0	1/1:12,0:12:3.01:42,3,0	./.	1/1:5,0:16:7.18:269,7,0	0/0:20,0:20:1.55:0,2,4	1/1:13,0:23:3.01:35,3,0	1/1:19,6:25:27.02:575,27,0	1/1:19,4:22:9.03:221,9,0	1/1:10,7:16:18.06:377,18,0	1/1:5,0:18:12.04:188,12,0	1/1:7,0:23:17.97:202,18,0	0/0:8,0:12:11.97:0,12,97	0/1:8,1:9:19.92:36,0,20	1/1:9,3:12:9:136,9,0	1/1:22,0:29:15.52:254,16,0	0/1:9,0:8:0:0,0,0	1/1:6,10:16:6.02:135,6,0	1/1:17,6:23:12.04:295,12,0	1/1:5,4:9:6.02:147,6,0	1/1:3,8:11:15.05:304,15,0	1/1:11,0:13:9.50:168,10,0	1/1:19,0:26:20.58:323,21,0	1/1:3,0:6:1.41:53,1,0
chr10	22743018	.	TA	T	194.91	PASS	AB=0.833;AC=4;AF=0.071;AN=56;BaseQRankSum=4.945;DP=432;FS=0.000;HRun=1;HaplotypeScore=127.0654;InbreedingCoeff=0.2658;MQ=49.51;MQ0=5;MQRankSum=-3.231;QD=4.24;ReadPosRankSum=0.716;VQSLOD=0.0907;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:11.18:0,11,120	0/0:12,0:11:10.44:0,10,153	0/0:3,0:1:3.01:0,3,46	0/0:6,0:3:9.03:0,9,137	0/0:17,0:17:26.88:0,27,380	0/0:19,0:19:34.65:0,35,538	0/0:9,0:9:24.08:0,24,367	0/0:25,0:24:72.21:0,72,1074	1/1:12,1:13:5.37:47,5,0	0/0:18,0:18:51.16:0,51,722	0/0:16,0:16:21:0,21,273	0/0:24,0:24:53.97:0,54,726	0/0:20,0:19:42.33:0,42,601	0/0:17,0:16:29.31:0,29,417	0/0:16,0:16:9.56:0,10,136	0/1:21,0:21:99:144,0,200	0/0:14,0:14:25.29:0,25,294	0/0:11,0:11:26.89:0,27,376	0/0:11,0:11:27.52:0,28,322	0/0:26,0:26:43.59:0,44,602	0/1:6,6:11:99:108,0,120	0/0:15,0:15:18.10:0,18,241	0/0:21,0:21:41.28:0,41,536	0/0:8,0:8:10.39:0,10,139	0/0:9,0:9:10.85:0,11,115	0/0:16,0:14:31.67:0,32,466	0/0:25,0:25:42.17:0,42,528	0/0:8,0:8:12.16:0,12,142
chr10	22743135	.	TA	T	8562.28	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=9.324;DP=500;FS=3.903;HRun=8;HaplotypeScore=53.9309;InbreedingCoeff=0.9451;MQ=72.29;MQ0=0;MQRankSum=-2.432;QD=24.60;ReadPosRankSum=1.102;VQSLOD=5.6494;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:56.92:0,57,676	1/1:1,2:3:6.01:58,6,0	0/0:13,0:14:12.59:0,13,265	0/0:5,0:5:9.50:0,9,107	0/0:27,0:27:81.24:0,81,968	1/1:3,21:24:60.09:579,60,0	1/1:1,11:12:33.05:319,33,0	1/1:3,23:26:69.11:666,69,0	1/1:2,12:14:36.05:348,36,0	0/0:24,0:24:66.17:0,66,766	0/0:24,0:24:64.44:0,64,764	1/1:2,18:20:51.08:493,51,0	1/1:0,23:23:66.11:637,66,0	1/1:1,13:14:33.05:319,33,0	0/0:10,0:10:24.06:0,24,279	0/0:25,0:25:69.21:0,69,834	1/1:2,13:15:39.06:377,39,0	1/1:1,10:11:27.04:261,27,0	1/1:3,16:19:48.06:458,48,0	1/1:4,30:34:75.10:724,75,0	1/1:2,8:10:24.04:232,24,0	1/1:2,14:16:42.07:406,42,0	1/1:0,19:19:54.09:522,54,0	1/1:1,8:9:24.04:232,24,0	1/1:0,22:22:66.11:637,66,0	1/1:4,14:18:5.82:340,6,0	1/1:2,33:35:87.13:840,87,0	1/1:0,4:4:12.02:116,12,0
chr10	22746256	.	CTT	C	6534.09	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-8.015;DP=580;FS=1.952;HRun=11;HaplotypeScore=88.9270;InbreedingCoeff=0.9585;MQ=71.18;MQ0=2;MQRankSum=-0.342;QD=24.11;ReadPosRankSum=2.443;VQSLOD=4.9501;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:18:50.64:0,51,710	0/0:0,0:11:27.32:0,27,94	0/0:10,0:10:20.42:0,20,228	0/0:8,0:9:5.05:0,5,149	0/0:9,0:35:71.61:0,72,302	1/1:4,14:20:32.51:311,33,0	1/1:3,9:12:27.05:287,27,0	1/1:6,24:30:72.15:758,72,0	0/0:5,0:18:33.46:0,33,166	0/0:3,0:25:56.58:0,57,240	0/0:4,0:28:61.25:0,61,271	1/1:1,19:19:51.13:543,51,0	1/1:1,29:30:72.09:766,72,0	1/1:6,22:27:54.11:575,54,0	0/0:27,0:27:60.19:0,60,902	0/0:24,0:24:60.19:0,60,903	0/0:5,0:22:37.93:0,38,144	0/0:6,0:16:28.43:0,28,123	0/0:9,0:21:44.83:0,45,255	0/0:5,0:26:61.11:0,61,270	0/0:2,1:18:8.51:0,9,96	1/1:4,18:22:51.09:541,51,0	1/1:5,13:18:32.87:351,33,0	1/1:2,16:18:45.11:479,45,0	1/1:2,17:20:50.86:522,51,0	1/1:1,16:17:45.08:479,45,0	1/1:6,27:33:81.17:859,81,0	1/1:1,2:3:6.01:64,6,0
chr10	22747471	.	GA	G	20230.28	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-1.692;DP=722;FS=5.159;HRun=5;HaplotypeScore=75.9167;InbreedingCoeff=0.9483;MQ=81.48;MQ0=0;MQRankSum=-9.646;QD=30.61;ReadPosRankSum=7.722;VQSLOD=4.3981;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,42:45:99:1361,120,0	1/1:0,14:14:39.11:442,39,0	0/0:33,0:33:89.15:0,89,1106	0/0:27,0:26:57.47:0,57,699	1/1:2,27:29:75.21:851,75,0	1/1:2,29:31:81.23:912,81,0	1/1:2,30:32:84.24:953,84,0	1/1:2,31:33:87.24:977,87,0	1/1:0,22:22:54.15:612,54,0	1/1:0,22:22:66.19:749,66,0	1/1:1,26:27:78.22:885,78,0	1/1:1,17:18:31.32:525,31,0	1/1:1,38:39:99:1191,105,0	1/1:0,22:22:66.19:749,66,0	1/1:1,33:34:93.27:1055,93,0	1/1:1,29:30:81.23:919,81,0	1/1:1,32:33:87.25:987,87,0	1/1:3,17:20:54.09:596,54,0	1/1:1,20:21:57.16:647,57,0	1/1:1,19:20:51.02:547,51,0	1/1:1,26:27:72.21:817,72,0	1/1:1,17:18:45.13:510,45,0	1/1:1,25:26:72.21:817,72,0	1/1:0,25:25:69.20:783,69,0	1/1:1,20:21:54.15:613,54,0	1/1:1,27:28:81.23:919,81,0	1/1:0,22:22:66.19:749,66,0	1/1:0,2:2:6.02:68,6,0
chr10	22749073	.	C	CT	9173.03	PASS	AB=1.000;AC=41;AF=0.732;AN=56;BaseQRankSum=-10.970;DP=488;FS=1.731;HRun=8;HaplotypeScore=46.9429;InbreedingCoeff=0.8745;MQ=77.69;MQ0=0;MQRankSum=-0.968;QD=27.14;ReadPosRankSum=1.168;VQSLOD=5.4228;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:24.01:0,24,220	1/1:1,9:10:21.06:242,21,0	0/0:11,0:12:12.74:0,13,182	0/1:10,0:10:11.51:12,0,57	0/0:22,0:22:38.47:0,38,521	1/1:2,16:18:51.15:586,51,0	1/1:3,8:11:21.06:242,21,0	1/1:6,14:20:39.05:405,39,0	1/1:1,13:14:36.11:415,36,0	0/0:34,0:34:84.04:0,84,768	0/0:22,0:23:62.05:0,62,550	1/1:0,19:19:54.16:623,54,0	1/1:1,20:21:48.13:553,48,0	1/1:0,21:21:63.19:727,63,0	0/0:24,0:24:69.02:0,69,627	0/0:26,0:26:72.04:0,72,658	1/1:2,23:25:48.14:554,48,0	1/1:2,12:15:2.66:283,3,0	1/1:2,11:13:36.10:407,36,0	1/1:3,18:21:29.71:596,30,0	1/1:0,6:6:18.05:208,18,0	1/1:0,7:7:21.06:242,21,0	1/1:2,15:17:24.21:460,24,0	1/1:1,7:8:21.06:242,21,0	1/1:2,20:22:54.16:623,54,0	1/1:2,16:19:26.53:541,27,0	1/1:5,28:31:84.25:968,84,0	1/1:1,7:8:21.06:242,21,0
chr10	22749743	.	T	TAC	515.53	PASS	AB=0.971;AC=13;AF=0.271;AN=48;BaseQRankSum=-2.959;DP=605;FS=1.116;HRun=0;HaplotypeScore=97.9431;InbreedingCoeff=0.1150;MQ=65.88;MQ0=11;MQRankSum=1.188;QD=2.12;ReadPosRankSum=-0.192;VQSLOD=2.0306;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:46,0:46:9.35:114,0,9	0/0:10,0:10:8.69:0,9,60	./.	./.	0/1:14,0:14:19.91:71,0,20	0/0:12,0:12:6.01:0,6,64	0/1:20,0:20:44.16:44,0,125	./.	0/0:14,0:18:11.36:0,11,56	1/1:26,0:26:6.95:70,7,0	1/1:14,2:15:6.02:88,6,0	0/0:26,0:27:23.68:0,24,237	0/0:25,0:28:19.26:0,19,177	0/0:12,0:13:8.69:0,9,60	0/1:26,6:34:31.96:32,0,79	1/1:17,11:32:3.31:178,3,0	0/0:14,0:21:19.89:0,20,98	0/1:12,0:13:11.67:12,0,17	0/0:11,0:11:2.84:0,3,14	0/0:13,0:17:11.39:0,11,57	0/0:29,0:32:22.82:0,23,142	0/1:17,0:18:8.12:18,0,8	0/0:13,0:18:8.99:0,9,42	0/0:26,0:26:26.69:0,27,251	0/0:12,0:12:3.01:0,3,32	0/1:21,0:21:32.26:32,0,54	0/0:26,0:25:14.76:0,15,141	./.
chr10	22751640	.	C	CT	2932.39	PASS	AB=0.985;AC=21;AF=0.375;AN=56;BaseQRankSum=-11.676;DP=509;FS=12.048;HRun=9;HaplotypeScore=76.3869;InbreedingCoeff=0.0379;MQ=71.31;MQ0=0;MQRankSum=0.062;QD=8.65;ReadPosRankSum=-4.882;VQSLOD=-0.2013;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:47.97:0,48,417	0/1:8,0:8:10.49:10,0,18	0/0:10,0:10:2.03:0,2,30	0/0:7,0:7:1.67:0,2,36	1/1:10,18:28:49.13:754,49,0	0/1:25,0:26:26.86:121,0,27	0/1:15,1:16:28.50:28,0,38	0/1:34,2:36:32.30:124,0,32	0/1:15,0:15:19.82:32,0,20	1/1:2,16:19:50.75:516,51,0	1/1:6,19:26:62.99:669,63,0	0/1:15,0:15:2.04:2,0,37	0/1:15,0:15:22.41:34,0,22	0/1:19,0:19:40.33:40,0,42	0/0:13,0:13:32.98:0,33,284	0/0:28,0:28:77.93:0,78,667	0/1:25,0:25:19.61:20,0,41	0/0:18,0:18:24.96:0,25,74	0/1:19,0:19:3.35:120,0,3	0/0:25,0:25:19.78:0,20,109	0/0:8,0:8:11.22:0,11,33	0/1:12,0:12:8.72:9,0,21	1/1:4,16:20:49.79:557,50,0	0/0:7,0:7:9.19:0,9,26	0/1:22,0:22:2.51:3,0,36	0/1:17,1:18:8.87:65,0,9	0/0:27,0:27:45.55:0,46,142	0/0:5,0:5:3.71:0,4,10
chr10	22751737	.	A	AG	2108.33	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-10.486;DP=525;FS=0.502;HRun=6;HaplotypeScore=66.5722;InbreedingCoeff=0.9883;MQ=82.66;MQ0=0;MQRankSum=-1.798;QD=30.56;ReadPosRankSum=2.557;VQSLOD=4.3292;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:57.09:0,57,568	0/0:11,0:11:27.06:0,27,275	0/0:18,0:18:48.07:0,48,478	0/0:13,0:13:29.19:0,29,260	1/1:4,22:26:66.21:824,66,0	0/0:27,0:27:75.17:0,75,765	0/0:11,0:11:27.06:0,27,275	0/0:27,0:27:66.10:0,66,660	0/0:22,0:22:60.13:0,60,612	1/1:1,14:15:42.13:528,42,0	1/1:3,25:28:72.23:898,72,0	0/0:17,0:17:48.11:0,48,490	0/0:20,0:20:54.12:0,54,550	0/0:25,0:25:66.14:0,66,673	0/0:20,0:20:60.14:0,60,612	0/0:25,0:25:75.16:0,75,761	0/0:22,0:22:63.14:0,63,643	0/0:18,0:18:51.09:0,51,512	0/0:16,0:16:39.53:0,40,386	0/0:23,0:23:69.16:0,69,704	0/0:10,0:10:27.06:0,27,275	0/0:13,0:13:36.08:0,36,367	0/0:17,0:17:48.10:0,48,484	0/0:8,0:8:24.05:0,24,245	0/0:21,0:21:63.14:0,63,643	0/0:17,1:18:13.37:0,13,452	0/0:27,0:27:81.18:0,81,826	0/0:7,0:7:21.05:0,21,214
chr10	22754174	.	T	TA	1312.81	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-10.173;DP=559;FS=19.662;HRun=6;HaplotypeScore=94.0329;InbreedingCoeff=0.9423;MQ=77.19;MQ0=0;MQRankSum=-2.870;QD=31.26;ReadPosRankSum=2.218;VQSLOD=2.0261;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:93.21:0,93,949	0/0:9,0:9:24.05:0,24,245	0/0:15,0:15:33.06:0,33,329	0/0:14,0:13:23.54:0,24,199	0/0:25,0:25:69.15:0,69,704	0/0:18,0:18:51.11:0,51,520	0/0:16,0:16:45.10:0,45,459	0/0:23,0:22:60.12:0,60,607	0/0:17,0:17:48.11:0,48,490	0/0:21,0:21:63.14:0,63,639	0/0:24,0:24:66.15:0,66,673	0/0:17,0:17:45.07:0,45,445	0/0:28,0:28:75.15:0,75,758	0/0:20,0:20:57.12:0,57,575	1/1:1,23:24:66.21:830,66,0	1/1:2,16:18:48.15:604,48,0	0/0:28,0:28:72.10:0,72,716	0/0:16,0:16:36.08:0,36,367	0/0:25,0:25:63.14:0,63,643	0/0:26,0:26:72.15:0,72,728	0/0:6,0:6:18.02:0,18,175	0/0:18,0:18:48.09:0,48,483	0/0:23,0:23:66.15:0,66,673	0/0:12,0:12:33.07:0,33,336	0/0:22,0:22:60.13:0,60,612	0/0:22,0:22:63.14:0,63,643	0/0:37,0:37:99:0,102,1026	0/0:3,0:3:6.01:0,6,61
chr10	22754390	.	GA	G	10933.01	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=1.738;DP=657;FS=5.213;HRun=8;HaplotypeScore=72.1609;InbreedingCoeff=0.9987;MQ=76.85;MQ0=0;MQRankSum=-1.593;QD=23.51;ReadPosRankSum=2.020;VQSLOD=5.7358;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:84.22:0,84,989	1/1:0,8:8:21.03:203,21,0	0/0:19,0:19:32.44:0,32,362	0/0:18,0:18:36.05:0,36,404	0/0:22,0:22:61.42:0,61,716	1/1:3,26:29:72.11:695,72,0	1/1:0,19:19:48.08:464,48,0	1/1:6,35:41:99:990,105,0	1/1:1,22:23:57.09:550,57,0	0/0:24,0:24:65.41:0,65,759	0/0:20,0:20:54.16:0,54,649	1/1:2,18:20:45.07:434,45,0	1/1:3,32:35:90.14:869,90,0	1/1:1,22:23:69.01:654,69,0	0/0:29,0:29:75.22:0,75,897	0/0:27,1:28:49.25:0,49,859	1/1:3,25:28:69.10:666,69,0	1/1:5,16:21:42.06:406,42,0	1/1:2,13:15:39.02:367,39,0	1/1:0,31:31:90.01:852,90,0	1/1:1,13:14:33.05:319,33,0	1/1:7,24:31:63.09:608,63,0	1/1:5,26:31:63.10:609,63,0	1/1:0,10:10:30.05:290,30,0	1/1:2,18:20:42.06:406,42,0	1/1:4,20:24:26.84:538,27,0	1/1:6,27:33:78.12:753,78,0	1/1:0,9:9:27.04:261,27,0
chr10	22755281	.	TTGCGTGCG	T	12792.83	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=7.884;DP=604;FS=6.454;HRun=0;HaplotypeScore=259.5409;InbreedingCoeff=0.9330;MQ=77.01;MQ0=1;MQRankSum=-10.905;QD=27.51;ReadPosRankSum=4.268;VQSLOD=3.1423;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:96:0,96,2908	1/1:8,1:9:17.84:175,18,0	0/0:31,0:29:62.31:0,62,596	0/0:19,0:19:33.40:0,33,252	1/1:8,21:29:44.86:742,45,0	1/1:17,7:24:53.78:772,54,0	1/1:12,4:16:26.88:387,27,0	1/1:29,0:29:71.65:569,72,0	1/1:15,6:21:41.88:598,42,0	1/1:3,24:27:59.99:994,60,0	1/1:1,14:15:21.07:486,21,0	1/1:17,9:26:56.92:819,57,0	1/1:20,16:36:92.70:1385,93,0	1/1:18,17:35:83.75:1407,84,0	0/0:28,0:28:75.03:0,75,2204	0/0:24,0:24:68.97:0,69,1969	1/1:21,4:25:35.75:444,36,0	1/1:8,3:11:29.77:318,30,0	1/1:13,1:14:35.92:345,36,0	1/1:4,5:9:20.99:391,21,0	1/1:15,0:15:8.87:60,9,0	1/1:0,18:18:12.04:277,12,0	1/1:2,14:16:12.04:254,12,0	1/1:15,2:16:9.46:117,9,0	1/1:21,9:30:68.71:935,69,0	1/1:9,5:14:35.75:509,36,0	1/1:21,5:27:65.64:769,66,0	1/1:2,0:2:5.91:38,6,0
chr10	22755303	.	GC	G	1013.27	PASS	AB=0.941;AC=41;AF=0.820;AN=50;BaseQRankSum=13.609;DP=344;FS=2.118;HRun=1;HaplotypeScore=194.0054;InbreedingCoeff=0.5869;MQ=62.19;MQ0=2;MQRankSum=-12.452;QD=4.33;ReadPosRankSum=6.932;VQSLOD=0.3975;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,132,2013	1/1:2,0:2:5:27,5,0	0/1:15,1:14:21.86:22,0,346	0/0:13,0:13:0.54:0,1,255	1/1:19,0:19:30.40:164,30,0	1/1:9,1:10:19.48:81,19,0	1/1:4,0:4:8.70:26,9,0	./.	1/1:7,0:7:3.86:28,4,0	1/1:23,1:24:25.41:94,25,0	1/1:12,0:12:15.54:46,16,0	1/1:12,1:13:20.14:88,20,0	1/1:19,0:19:30.17:95,30,0	1/1:19,0:19:35.05:108,35,0	0/0:26,0:26:78.27:0,78,1242	0/0:24,0:24:72.25:0,72,1145	1/1:5,0:5:5.82:22,6,0	1/1:3,0:3:7.04:32,7,0	1/1:7,1:8:5.04:34,5,0	1/1:12,0:12:10.73:33,11,0	./.	1/1:16,0:16:8.88:26,9,0	1/1:7,0:7:9.49:53,9,0	1/1:4,1:3:5.23:39,5,0	1/1:12,0:12:18.52:59,19,0	1/1:14,0:14:9.75:30,10,0	1/1:7,0:7:15.56:60,16,0	./.
chr10	22755305	.	ATGCGTGCATGCGTGCG	A	18495.15	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=13.485;DP=466;FS=6.127;HRun=0;HaplotypeScore=276.6133;InbreedingCoeff=0.8756;MQ=57.70;MQ0=2;MQRankSum=-12.014;QD=55.21;ReadPosRankSum=1.177;VQSLOD=3.8772;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,129,7029	1/1:3,1:4:6:151,6,0	0/0:17,0:15:32.96:0,33,906	0/0:13,0:14:27.08:0,27,469	1/1:12,12:24:39.90:1339,40,0	1/1:6,8:15:38.88:1114,39,0	1/1:12,4:16:32.80:652,33,0	1/1:8,0:8:23.78:169,24,0	1/1:10,6:16:41.75:937,42,0	1/1:17,11:29:56.81:1584,57,0	1/1:8,7:15:29.86:936,30,0	1/1:13,9:23:53.68:1218,54,0	1/1:8,16:24:60.04:2012,60,0	1/1:10,17:27:68.82:2272,69,0	0/0:28,0:28:78.20:0,78,4234	0/0:25,0:25:69.21:0,69,3867	1/1:7,4:11:24.42:611,24,0	1/1:5,3:8:20.93:436,21,0	1/1:7,1:9:26.90:315,27,0	1/1:7,5:12:15.05:633,15,0	1/1:4,0:4:2.98:24,3,0	1/1:13,4:17:12.04:505,12,0	1/1:7,4:11:17.98:524,18,0	1/1:8,2:9:8.93:168,9,0	1/1:11,9:20:43.22:1235,43,0	1/1:11,5:16:39.37:796,39,0	1/1:7,6:13:29.94:846,30,0	1/1:2,0:2:2.97:20,3,0
chr10	22755313	.	ATGCGTGCG	A	12588.29	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=13.304;DP=489;FS=0.858;HRun=0;HaplotypeScore=241.9143;InbreedingCoeff=0.9130;MQ=58.41;MQ0=2;MQRankSum=-9.817;QD=35.16;ReadPosRankSum=0.569;VQSLOD=4.3949;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,132,3369	1/1:5,0:5:9:119,9,0	0/0:13,0:12:25.53:0,26,354	0/0:14,0:14:32.15:0,32,283	1/1:19,0:19:44.91:759,45,0	1/1:16,0:16:41.88:692,42,0	1/1:24,0:24:56.77:629,57,0	1/1:17,0:17:50.80:415,51,0	1/1:16,0:16:41.73:584,42,0	1/1:21,0:21:59.94:1004,60,0	1/1:11,0:11:29.86:544,30,0	1/1:30,0:30:74.74:955,75,0	1/1:22,0:22:57.02:1132,57,0	1/1:32,0:32:83.79:1429,84,0	0/0:30,0:30:75:0,75,2051	0/0:25,0:25:71.97:0,72,2056	1/1:12,0:12:26.46:396,26,0	1/1:10,0:10:26.90:313,27,0	1/1:2,14:16:47.87:436,48,0	1/1:5,8:13:15.05:353,15,0	1/1:6,0:6:5.98:49,6,0	1/1:8,0:8:15.04:306,15,0	1/1:9,0:9:20.97:325,21,0	1/1:15,0:13:14.91:158,15,0	1/1:22,0:22:56.78:851,57,0	1/1:5,13:18:47.45:585,47,0	1/1:14,0:14:32.94:535,33,0	1/1:2,0:2:2.97:20,3,0
chr10	22755633	.	TGCACGG	T	25106.57	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=15.464;DP=662;FS=22.115;HRun=0;HaplotypeScore=239.5152;InbreedingCoeff=0.9884;MQ=77.32;MQ0=0;MQRankSum=-16.609;QD=50.21;ReadPosRankSum=2.806;VQSLOD=3.5236;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,144,4911	1/1:3,8:11:27.09:611,27,0	0/0:23,0:23:57.20:0,57,1741	0/0:28,0:27:60.06:0,60,1661	1/1:3,14:17:24.08:538,24,0	1/1:4,20:24:60.19:1337,60,0	1/1:5,17:22:57.16:1208,57,0	1/1:11,13:24:42.14:952,42,0	1/1:4,23:27:75.24:1644,75,0	1/1:5,20:25:66.22:1463,66,0	1/1:1,9:10:15.05:340,15,0	1/1:4,25:29:78.25:1677,78,0	1/1:5,32:37:99:2327,102,0	1/1:7,28:35:84.27:1889,84,0	0/0:39,0:39:99:0,111,3570	0/0:21,0:21:63.20:0,63,2099	1/1:9,25:34:61.15:1371,61,0	1/1:5,13:18:38.19:897,38,0	1/1:7,12:19:39.12:856,39,0	1/1:4,14:18:45.14:991,45,0	1/1:6,8:14:16.44:289,16,0	1/1:3,13:16:36.12:817,36,0	1/1:2,10:12:15.52:346,16,0	1/1:10,14:24:26.54:607,27,0	1/1:2,22:24:60.21:1381,60,0	1/1:6,22:28:72.25:1632,72,0	1/1:3,22:25:63.22:1452,63,0	1/1:0,7:7:21.07:483,21,0
chr10	22755656	.	A	AC	19052.78	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=10.039;DP=671;FS=10.402;HRun=2;HaplotypeScore=204.1556;InbreedingCoeff=0.9982;MQ=74.28;MQ0=0;MQRankSum=-14.205;QD=36.08;ReadPosRankSum=-2.190;VQSLOD=1.9009;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,120,1474	1/1:1,7:8:21.07:302,21,0	0/0:26,0:26:63.16:0,63,837	0/0:21,0:20:29.70:0,30,538	1/1:2,19:21:48.16:672,48,0	1/1:2,22:24:66.22:948,66,0	1/1:2,19:21:51.17:733,51,0	1/1:2,24:26:72.20:1001,72,0	1/1:6,23:29:72.24:1010,72,0	1/1:6,17:23:54.18:776,54,0	1/1:0,12:12:30.10:430,30,0	1/1:2,25:27:69.23:991,69,0	1/1:2,34:36:93.31:1317,93,0	1/1:2,29:31:87.29:1241,87,0	0/0:31,0:31:90.28:0,90,1115	0/0:24,0:24:63.20:0,63,780	1/1:3,28:31:75.25:1049,75,0	1/1:0,20:20:57.19:800,57,0	1/1:4,19:23:57.19:813,57,0	1/1:0,19:19:48.16:673,48,0	1/1:1,17:18:32.71:465,33,0	1/1:0,17:17:51.17:729,51,0	1/1:0,19:19:51.17:733,51,0	1/1:2,20:22:35.79:497,36,0	1/1:2,29:31:84.28:1201,84,0	1/1:2,31:33:90.30:1293,90,0	1/1:1,28:29:72.24:1033,72,0	1/1:0,8:8:24.08:345,24,0
chr10	22756282	.	AT	A	4289.12	PASS	AB=0.947;AC=42;AF=0.750;AN=56;BaseQRankSum=7.758;DP=625;FS=11.226;HRun=3;HaplotypeScore=168.9487;InbreedingCoeff=0.7925;MQ=68.68;MQ0=0;MQRankSum=-3.505;QD=8.75;ReadPosRankSum=1.873;VQSLOD=1.4096;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:51.14:0,51,694	1/1:12,0:12:26.99:133,27,0	0/0:14,0:14:23.94:0,24,244	0/0:13,0:13:29.92:0,30,334	0/1:38,3:41:19.85:20,0,247	1/1:25,0:24:55.59:225,56,0	1/1:10,0:10:14.81:91,15,0	1/1:35,0:35:85.52:564,86,0	1/1:18,0:18:32.16:176,32,0	0/1:24,1:25:85.01:85,0,85	0/0:28,0:28:22.26:0,22,227	1/1:23,1:24:41.42:167,41,0	1/1:33,0:33:68.86:396,69,0	1/1:22,0:22:27.80:161,28,0	0/0:34,0:34:96.31:0,96,1360	0/0:28,0:28:84.27:0,84,1188	1/1:15,0:15:26.19:146,26,0	1/1:15,0:15:19.78:136,20,0	1/1:23,1:24:55.13:328,55,0	1/1:30,0:30:48.96:293,49,0	1/1:11,0:11:8.07:72,8,0	1/1:16,0:16:22.43:105,22,0	1/1:17,0:17:36.02:154,36,0	1/1:13,0:13:29.15:133,29,0	1/1:30,1:31:46.03:272,46,0	1/1:27,0:27:56.37:308,56,0	1/1:33,0:33:26.14:226,26,0	1/1:13,0:13:23.64:101,24,0
chr10	22756284	.	T	TA	10497.47	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=6.620;DP=622;FS=3.771;HRun=0;HaplotypeScore=150.3985;InbreedingCoeff=0.9607;MQ=67.38;MQ0=0;MQRankSum=-5.560;QD=24.58;ReadPosRankSum=3.024;VQSLOD=5.1119;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:51.17:0,51,712	1/1:4,9:13:31.57:343,32,0	0/0:10,0:12:22.25:0,22,268	0/0:12,0:13:29.76:0,30,343	0/0:39,1:40:81.35:0,81,586	1/1:2,23:24:65.67:756,66,0	1/1:4,7:11:4.82:214,5,0	1/1:13,22:35:65.08:743,65,0	1/1:3,14:17:40.45:443,40,0	0/0:25,0:25:34.59:0,35,263	0/0:28,0:28:77.19:0,77,464	1/1:2,22:24:54.17:688,54,0	1/1:8,23:31:65.05:824,65,0	1/1:5,16:21:37.28:509,37,0	0/0:32,0:32:96.32:0,96,1339	0/0:28,0:28:84.28:0,84,1168	1/1:5,10:15:15.66:304,16,0	1/1:6,9:15:7.02:274,7,0	1/1:13,15:28:42.42:598,42,0	1/1:11,20:31:43.41:666,43,0	1/1:3,8:11:23.96:246,24,0	1/1:1,16:17:44.96:457,45,0	1/1:1,15:16:48.08:523,48,0	1/1:1,12:13:27.68:327,28,0	1/1:8,24:32:57.92:762,58,0	1/1:5,22:27:49.57:670,50,0	1/1:10,25:35:42.19:855,42,0	1/1:1,9:10:27.07:297,27,0
chr10	22756320	.	AATG	A	21304.90	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=11.739;DP=635;FS=0.394;HRun=0;HaplotypeScore=147.0322;InbreedingCoeff=0.9962;MQ=69.11;MQ0=0;MQRankSum=-8.597;QD=40.50;ReadPosRankSum=0.296;VQSLOD=5.7360;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:51.16:0,51,1097	1/1:0,11:11:29.85:489,30,0	0/0:19,0:19:57.11:0,57,1132	0/0:7,0:7:18.03:0,18,296	1/1:1,37:38:99:1503,99,0	1/1:1,26:27:81.26:1286,81,0	1/1:3,9:12:33.10:503,33,0	1/1:7,29:36:99:1449,99,0	1/1:0,15:15:30.10:489,30,0	1/1:0,22:22:63.17:983,63,0	1/1:1,31:32:90.22:1371,90,0	1/1:1,25:26:69.23:1113,69,0	1/1:5,19:24:63.04:1003,63,0	1/1:4,22:26:66.22:1062,66,0	0/0:35,0:35:96.33:0,96,2144	0/0:31,0:31:87.27:0,87,1824	1/1:4,11:15:33.11:526,33,0	1/1:1,8:9:27.09:424,27,0	1/1:2,19:21:60.16:882,60,0	1/1:2,31:33:96.26:1489,96,0	1/1:3,9:12:30.06:442,30,0	1/1:3,21:24:54.14:826,54,0	1/1:3,15:18:41.87:660,42,0	1/1:1,11:12:27.08:418,27,0	1/1:4,30:34:90.30:1443,90,0	1/1:4,22:26:72.24:1132,72,0	1/1:2,34:36:93.31:1494,93,0	1/1:4,13:17:21.06:319,21,0
chr10	22757030	.	G	GAGGA	483.09	PASS	AC=12;AF=0.261;AN=46;BaseQRankSum=-4.734;DP=614;FS=25.312;HRun=0;HaplotypeScore=151.8853;InbreedingCoeff=0.5603;MQ=54.17;MQ0=13;MQRankSum=1.210;QD=4.35;ReadPosRankSum=-2.282;VQSLOD=0.7561;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:25:3.90:51,4,0	0/0:6,0:6:9.01:0,9,84	./.	./.	1/1:14,0:13:9.02:146,9,0	0/0:28,0:28:3.95:0,4,29	./.	./.	0/0:23,0:23:30.03:0,30,276	0/0:17,0:17:12.02:0,12,115	1/1:13,0:13:2.88:15,3,0	0/0:30,0:30:8.48:0,8,82	0/0:31,0:31:8.97:0,9,74	0/0:31,0:31:17.56:0,18,163	1/1:16,4:20:12.01:195,12,0	1/1:12,6:18:9.03:208,9,0	0/0:26,0:26:3:0,3,28	0/0:23,0:23:4.54:0,5,26	0/0:21,0:20:9.01:0,9,86	0/0:23,0:23:9.01:0,9,83	1/1:21,0:21:0.45:1,0,0	0/0:18,0:18:6.01:0,6,56	0/0:15,0:15:2.95:0,3,24	0/0:18,0:18:0:0,0,0	0/0:34,0:34:8.37:0,8,60	0/0:23,0:23:3.92:0,4,14	0/0:24,0:23:6.01:0,6,55	./.
chr10	22757043	.	A	AGGAAGGAA	267.50	PASS	AB=1.000;AC=14;AF=0.304;AN=46;BaseQRankSum=-3.402;DP=605;FS=21.255;HRun=0;HaplotypeScore=185.2194;InbreedingCoeff=0.4784;MQ=53.56;MQ0=13;MQRankSum=1.518;QD=1.64;ReadPosRankSum=-1.456;VQSLOD=1.0326;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:18,4:24:7.26:141,7,0	0/0:6,0:6:9.03:0,9,167	./.	./.	1/1:12,0:12:6.01:84,6,0	0/0:29,0:29:3.95:0,4,57	./.	./.	0/0:22,0:22:30.10:0,30,551	0/0:18,0:18:12.04:0,12,217	1/1:12,0:11:2.88:15,3,0	0/0:31,0:31:8.51:0,9,136	0/0:38,0:38:8.96:0,9,83	0/0:35,0:35:21.07:0,21,347	1/1:19,0:19:5.99:49,6,0	1/1:20,0:20:8.98:73,9,0	0/0:30,0:30:3.01:0,3,56	0/0:22,0:22:5.38:0,5,38	0/0:22,0:21:9.03:0,9,147	0/0:24,0:24:8.26:0,8,166	1/1:19,0:19:0.45:1,0,0	0/0:21,0:21:6.02:0,6,109	0/0:21,0:21:2.55:0,3,26	0/1:22,0:22:0:0,0,0	0/1:35,0:35:38.79:39,0,52	0/0:22,0:22:1.24:0,1,3	0/0:20,0:20:6.02:0,6,93	./.
chr10	22757069	.	GAAGGAAGGAAGGAAGGAAGA	G	7247.14	PASS	AB=0.958;AC=32;AF=0.571;AN=56;BaseQRankSum=2.298;DP=623;FS=43.396;HRun=0;HaplotypeScore=262.2464;InbreedingCoeff=0.1950;MQ=54.50;MQ0=4;MQRankSum=1.027;QD=15.42;ReadPosRankSum=-1.676;VQSLOD=2.5182;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:27:60.68:0,61,1414	0/1:9,0:9:64.91:65,0,199	0/0:5,0:5:15.04:0,15,170	0/0:7,0:5:11.60:0,12,117	0/1:14,0:14:99:152,0,770	1/1:8,19:27:9.03:489,9,0	1/1:19,0:19:26.92:342,27,0	1/1:23,0:20:50.76:576,51,0	0/0:22,0:22:37.05:0,37,989	0/1:24,0:24:99:195,0,1787	0/1:14,0:13:96.86:97,0,840	1/1:8,21:29:15.05:833,15,0	1/1:9,27:36:11.70:520,12,0	1/1:13,26:39:6.83:999,7,0	0/0:30,0:30:77.78:0,78,2141	0/0:32,0:32:85.74:0,86,2634	0/0:30,0:30:24.08:0,24,669	0/1:16,0:16:52.94:53,0,667	0/1:15,0:15:99:130,0,753	0/1:28,0:28:87.70:88,0,1159	0/1:18,0:18:17.18:17,0,1047	1/1:4,15:19:19.73:424,20,0	1/1:2,21:23:3.11:311,3,0	1/1:4,17:21:8.84:192,9,0	1/1:9,26:35:9.03:506,9,0	0/1:7,18:25:99:773,0,194	1/1:6,21:27:8.90:353,9,0	0/1:9,0:9:41.39:131,0,41
chr10	22757081	.	GAAGGAAGA	G	7310.81	PASS	AB=1.000;AC=42;AF=0.750;AN=56;BaseQRankSum=6.682;DP=575;FS=9.199;HRun=0;HaplotypeScore=147.1289;InbreedingCoeff=0.5161;MQ=61.72;MQ0=2;MQRankSum=-1.499;QD=15.55;ReadPosRankSum=-0.136;VQSLOD=3.5475;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:60.92:0,61,637	1/1:0,9:9:23.55:345,24,0	0/0:11,0:11:26.14:0,26,312	0/0:9,0:7:17.56:0,18,164	0/1:16,0:16:99:247,0,183	1/1:19,0:19:9.03:186,9,0	1/1:15,0:15:32.79:255,33,0	1/1:33,0:32:88.62:739,89,0	1/1:3,19:22:30.10:825,30,0	0/1:28,0:28:99:424,0,354	0/1:13,0:12:99:163,0,115	1/1:21,0:21:15.05:322,15,0	1/1:27,0:27:11.70:212,12,0	1/1:27,0:27:10.06:387,10,0	0/0:27,0:27:71.70:0,72,853	0/0:31,0:31:72.55:0,73,1049	1/1:4,29:33:0.36:80,0,0	1/1:13,1:14:38.24:409,38,0	1/1:3,20:23:47.80:609,48,0	1/1:1,25:26:64.18:769,64,0	1/1:14,0:14:17.85:148,18,0	1/1:15,0:15:20.65:221,21,0	1/1:21,0:21:5.43:117,5,0	1/1:19,0:19:8.87:90,9,0	1/1:26,0:26:9.03:199,9,0	1/1:19,0:19:22.74:333,23,0	1/1:21,0:21:8.90:148,9,0	0/1:9,0:9:38.17:83,0,38
chr10	22757085	.	GAAGA	G	5547.12	PASS	AB=0.966;AC=42;AF=0.750;AN=56;BaseQRankSum=6.746;DP=569;FS=3.304;HRun=0;HaplotypeScore=124.1550;InbreedingCoeff=0.5361;MQ=65.39;MQ0=2;MQRankSum=-2.539;QD=12.01;ReadPosRankSum=0.366;VQSLOD=4.2588;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:59.55:0,60,482	1/1:9,0:9:23.63:208,24,0	0/0:14,0:14:35.15:0,35,395	0/0:10,0:8:20.81:0,21,190	0/1:15,0:15:15.27:270,0,15	1/1:19,0:19:9.02:102,9,0	1/1:15,0:15:32.79:255,33,0	1/1:38,0:37:99:879,104,0	1/1:20,1:21:30.10:386,30,0	0/1:21,4:25:95.43:459,0,95	0/1:13,0:12:35.12:163,0,35	1/1:21,0:21:15.05:182,15,0	1/1:27,0:27:11.70:128,12,0	1/1:27,0:27:20.98:247,21,0	0/0:27,0:27:74.66:0,75,734	0/0:29,0:29:75.06:0,75,832	1/1:31,0:31:2.90:39,3,0	1/1:13,0:13:38.85:335,39,0	1/1:21,0:21:44.81:449,45,0	1/1:25,0:25:59.16:422,59,0	1/1:11,0:11:16.57:109,17,0	1/1:15,0:15:20.69:165,21,0	1/1:21,0:21:5.77:62,6,0	1/1:18,0:19:8.86:62,9,0	1/1:26,0:26:9.03:115,9,0	1/1:19,0:19:45.95:317,46,0	1/1:21,0:21:8.89:92,9,0	0/1:10,0:10:35.07:101,0,35
chr10	22757352	.	A	AG	18708.12	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-11.527;DP=579;FS=5.452;HRun=1;HaplotypeScore=55.1404;InbreedingCoeff=0.9955;MQ=89.47;MQ0=0;MQRankSum=-6.018;QD=40.49;ReadPosRankSum=1.403;VQSLOD=5.4286;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:69.22:0,69,896	1/1:0,5:5:15.05:225,15,0	0/0:19,0:19:48.13:0,48,589	0/0:25,0:25:69.08:0,69,818	1/1:0,22:23:60.13:865,60,0	1/1:0,31:31:87.29:1302,87,0	1/1:0,18:18:48.16:719,48,0	1/1:0,31:31:87.20:1195,87,0	1/1:0,15:15:42.14:629,42,0	1/1:1,19:20:54.14:784,54,0	1/1:0,15:15:36.12:539,36,0	1/1:1,17:18:51.17:754,51,0	1/1:0,22:22:63.21:944,63,0	1/1:2,28:30:81.27:1214,81,0	0/0:22,0:22:66.21:0,66,857	0/0:27,0:27:78.25:0,78,1001	1/1:4,21:26:62.42:906,62,0	1/1:0,9:9:27.09:404,27,0	1/1:2,20:22:60.18:860,60,0	1/1:0,20:20:60.20:896,60,0	1/1:0,21:21:60.20:899,60,0	1/1:0,10:10:24.08:359,24,0	1/1:1,23:24:69.23:1025,69,0	1/1:1,13:14:36.12:539,36,0	1/1:0,24:24:69.23:1020,69,0	1/1:1,18:19:51.17:764,51,0	1/1:1,30:31:84.28:1258,84,0	1/1:2,12:14:42.14:608,42,0
chr10	22758149	.	G	GT	11464.30	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-9.167;DP=445;FS=1.209;HRun=7;HaplotypeScore=38.9532;InbreedingCoeff=0.9093;MQ=73.88;MQ0=0;MQRankSum=-2.283;QD=29.78;ReadPosRankSum=0.089;VQSLOD=4.8439;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:5:12.02:0,12,116	1/1:2,14:16:39.12:466,39,0	0/0:8,0:8:12.01:0,12,116	0/0:6,0:6:0.64:0,1,66	1/1:4,17:21:51.07:583,51,0	1/1:2,16:18:45.14:544,45,0	1/1:1,7:8:18.06:217,18,0	1/1:6,29:35:87.25:1038,87,0	1/1:2,11:13:36.11:431,36,0	1/1:3,27:30:84.24:1000,84,0	1/1:2,17:19:51.16:613,51,0	1/1:1,6:7:18.06:217,18,0	1/1:1,21:22:51.16:616,51,0	1/1:2,13:15:39.12:471,39,0	0/0:26,0:25:72.11:0,72,695	0/0:15,0:15:45.07:0,45,434	1/1:3,14:17:45.10:527,45,0	1/1:0,6:6:18.05:216,18,0	1/1:5,13:18:38.09:458,38,0	1/1:5,21:26:57.13:669,57,0	1/1:3,4:7:12.04:145,12,0	1/1:0,11:11:33.10:398,33,0	1/1:0,17:18:51.02:595,51,0	1/1:1,7:8:18.06:217,18,0	1/1:2,17:19:51.16:616,51,0	1/1:4,17:21:51.13:594,51,0	1/1:1,19:20:51.16:616,51,0	1/1:0,10:10:18.06:217,18,0
chr10	22758974	.	GT	G	2724.86	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.906;DP=589;FS=7.409;HRun=4;HaplotypeScore=57.3218;InbreedingCoeff=0.9985;MQ=78.22;MQ0=0;MQRankSum=0.790;QD=30.62;ReadPosRankSum=1.896;VQSLOD=3.9480;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:42.13:0,42,570	0/0:12,0:12:36.11:0,36,487	0/0:14,0:14:27.08:0,27,354	0/0:13,0:13:32.88:0,33,417	1/1:1,30:31:87.27:1044,87,0	0/0:30,0:30:87.29:0,87,1218	0/0:13,0:13:36.11:0,36,489	0/0:35,0:35:99:0,102,1399	0/0:21,0:21:63.21:0,63,877	1/1:2,27:29:81.23:960,81,0	1/1:0,29:29:72.22:864,72,0	0/0:26,0:26:75.24:0,75,1033	0/0:26,0:26:78.26:0,78,1086	0/0:24,0:24:57.18:0,57,783	0/0:24,0:24:66.22:0,66,918	0/0:24,0:24:72.24:0,72,1005	0/0:17,0:17:42.14:0,42,588	0/0:14,0:14:42.14:0,42,584	0/0:20,0:20:57.19:0,57,797	0/0:35,0:35:99:0,102,1425	0/0:10,0:10:30.10:0,30,420	0/0:20,0:20:60.20:0,60,836	0/0:17,0:17:48.16:0,48,669	0/0:9,0:9:24.08:0,24,336	0/0:18,0:18:54.15:0,54,721	0/0:20,0:20:60.20:0,60,837	0/0:29,0:28:84.28:0,84,1169	0/0:14,0:14:42.14:0,42,588
chr10	22759125	.	TA	T	1887.84	PASS	AB=0.801;AC=36;AF=0.643;AN=56;BaseQRankSum=6.318;DP=540;FS=0.000;HRun=16;HaplotypeScore=96.2811;InbreedingCoeff=0.1091;MQ=65.63;MQ0=1;MQRankSum=-3.756;QD=4.32;ReadPosRankSum=4.802;VQSLOD=1.3447;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,5:17:23.70:133,24,0	1/1:2,0:9:13.09:36,13,0	0/1:27,0:17:4.80:5,0,133	0/0:10,0:7:3.82:0,4,39	0/1:17,3:21:23.11:23,0,164	0/1:22,11:32:10.91:173,0,11	0/1:8,5:14:22.14:73,0,22	1/1:14,14:29:20.23:222,20,0	1/1:6,0:23:37.81:110,38,0	0/0:22,0:24:6.33:0,6,198	0/0:21,1:23:10.80:0,11,169	0/1:13,2:15:5.34:57,0,5	1/1:12,7:21:9.78:163,10,0	0/1:14,7:24:25.49:112,0,25	0/0:11,1:22:2.48:0,2,96	0/0:23,1:24:29.91:0,30,355	1/1:6,0:13:12.17:34,12,0	1/1:3,0:5:3.98:11,4,0	1/1:7,0:13:14.49:45,14,0	1/1:7,0:37:53.82:151,54,0	1/1:5,0:7:4.06:11,4,0	1/1:3,6:9:14.54:90,15,0	0/1:20,3:23:29.12:29,0,139	1/1:8,10:19:30.05:171,30,0	1/1:15,8:24:1.71:194,2,0	0/1:10,6:18:45.81:74,0,46	0/1:14,6:24:17.23:113,0,17	0/1:9,1:11:30.18:30,0,62
chr10	22759187	.	T	TA	12688.83	PASS	AB=1.000;AC=43;AF=0.768;AN=56;BaseQRankSum=-8.405;DP=601;FS=4.048;HRun=8;HaplotypeScore=70.2193;InbreedingCoeff=0.9154;MQ=69.97;MQ0=0;MQRankSum=-1.181;QD=27.00;ReadPosRankSum=1.355;VQSLOD=5.6295;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,20:23:57.17:658,57,0	1/1:0,9:9:24.07:277,24,0	0/0:11,0:12:11.59:0,12,81	0/1:5,0:5:5.36:5,0,42	0/0:32,0:32:93.05:0,93,851	1/1:4,28:32:81.22:922,81,0	1/1:2,19:21:60.18:692,60,0	1/1:8,25:33:75.21:852,75,0	1/1:5,16:21:42.09:470,42,0	0/0:22,0:22:63.03:0,63,576	0/0:23,0:23:63.03:0,63,576	1/1:4,21:25:57.17:658,57,0	1/1:4,24:28:69.21:796,69,0	1/1:5,21:26:63.17:717,63,0	0/0:18,0:18:45.02:0,45,412	0/0:24,0:24:63.02:0,63,572	1/1:1,12:13:27.08:311,27,0	1/1:4,8:12:26.75:282,27,0	1/1:2,14:16:42.12:485,42,0	1/1:6,26:32:78.19:885,78,0	1/1:1,17:18:48.10:539,48,0	1/1:1,12:13:36.11:416,36,0	1/1:7,20:27:54.12:607,54,0	1/1:3,12:15:30.09:346,30,0	1/1:5,32:37:93.01:1051,93,0	1/1:6,22:28:63.17:715,63,0	1/1:4,23:27:63.19:727,63,0	1/1:1,8:9:24.07:277,24,0
chr10	22761701	.	ATATGTGTGTG	A	3616.77	PASS	AB=1.000;AC=21;AF=0.438;AN=48;BaseQRankSum=5.255;DP=267;FS=0.000;HRun=0;HaplotypeScore=91.6851;InbreedingCoeff=0.6208;MQ=56.00;MQ0=5;MQRankSum=-4.032;QD=28.26;ReadPosRankSum=-1.797;VQSLOD=2.6979;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:15:11.39:190,11,0	0/0:3,0:3:9.03:0,9,442	0/0:27,0:6:11.07:0,11,203	0/0:25,0:5:15.01:0,15,251	0/1:10,0:10:58.52:59,0,78	1/1:0,15:15:6.02:201,6,0	0/0:1,3:4:0:0,0,0	1/1:2,25:27:74.92:1105,75,0	0/0:9,0:9:27.08:0,27,1203	0/1:5,0:4:43.93:129,0,44	0/1:7,0:7:43.94:130,0,44	1/1:8,2:10:17.09:245,17,0	1/1:0,7:7:9.03:303,9,0	./.	0/0:8,0:8:24.07:0,24,1055	0/0:7,0:7:21.07:0,21,1059	0/0:12,0:12:33.08:0,33,1308	0/0:11,0:11:26.98:0,27,572	0/0:12,0:11:30.07:0,30,713	0/0:7,0:7:21.06:0,21,979	0/0:13,0:13:39.10:0,39,1458	./.	./.	./.	1/1:0,5:6:3.01:101,3,0	1/1:2,6:8:18.06:475,18,0	1/1:1,9:10:12.04:376,12,0	1/1:0,8:8:9.03:303,9,0
chr10	22761721	.	GTGTGT	G	1110.96	PASS	AB=0.925;AC=19;AF=0.396;AN=48;BaseQRankSum=8.006;DP=298;FS=3.880;HRun=0;HaplotypeScore=90.7246;InbreedingCoeff=0.4059;MQ=48.90;MQ0=12;MQRankSum=-5.741;QD=8.35;ReadPosRankSum=2.388;VQSLOD=1.5771;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:15,0:15:24.73:25,0,63	0/0:3,0:3:9.03:0,9,290	0/0:40,0:8:23.81:0,24,366	0/0:32,0:6:15.03:0,15,276	1/1:2,5:7:5.24:71,5,0	1/1:16,0:16:6.02:101,6,0	0/0:4,0:4:0:0,0,0	0/1:33,0:34:99:322,0,250	0/0:9,0:9:27.08:0,27,762	0/1:3,2:4:43.60:88,0,44	1/1:0,5:6:6.02:116,6,0	1/1:3,0:6:6.69:72,7,0	1/1:7,0:7:9:76,9,0	./.	0/0:9,0:9:27.09:0,27,707	0/0:9,0:9:27.09:0,27,714	0/0:16,0:15:42.14:0,42,971	0/0:9,0:9:18.06:0,18,456	0/0:11,0:9:23.56:0,24,433	0/0:7,0:7:21.07:0,21,636	0/0:13,0:13:36.12:0,36,989	./.	./.	./.	1/1:5,0:5:3:26,3,0	0/1:8,0:8:16.64:208,0,17	1/1:10,0:10:12.01:113,12,0	0/1:13,0:13:59.01:59,0,60
chr10	22761733	.	TGTG	T	223.08	PASS	AB=0.943;AC=15;AF=0.313;AN=48;BaseQRankSum=6.990;DP=256;FS=7.117;HRun=0;HaplotypeScore=83.9956;InbreedingCoeff=0.3258;MQ=58.23;MQ0=10;MQRankSum=-4.696;QD=3.28;ReadPosRankSum=3.740;VQSLOD=0.3931;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:11,0:10:12.51:13,0,111	0/0:3,0:3:9.03:0,9,217	0/0:35,0:9:15.05:0,15,282	0/0:27,0:8:11.78:0,12,206	1/1:2,5:7:3.01:51,3,0	0/1:14,0:14:55.99:56,0,86	./.	0/0:31,0:31:40.87:0,41,517	0/0:9,0:9:27.09:0,27,661	0/1:3,2:4:23.37:55,0,23	1/1:0,5:5:6.02:87,6,0	0/1:4,0:4:3.20:3,0,4	1/1:6,0:6:5.10:14,5,0	0/0:3,0:3:2.74:0,3,12	0/0:10,0:10:30.10:0,30,706	0/0:11,0:11:33.10:0,33,747	0/0:15,0:14:39.13:0,39,885	0/0:6,0:6:15.05:0,15,367	0/0:9,0:8:24.08:0,24,526	0/0:6,0:6:18.06:0,18,418	0/0:9,0:9:24.01:0,24,478	./.	./.	./.	1/1:2,0:2:1.82:5,2,0	0/1:7,0:7:18.26:49,0,18	1/1:6,1:7:4.87:32,5,0	0/0:11,0:11:2.66:0,3,126
chr10	22761744	.	TAC	T	992.24	PASS	AB=1.000;AC=24;AF=0.500;AN=48;BaseQRankSum=6.702;DP=229;FS=0.817;HRun=0;HaplotypeScore=73.2870;InbreedingCoeff=0.6957;MQ=65.24;MQ0=9;MQRankSum=-5.847;QD=7.81;ReadPosRankSum=0.366;VQSLOD=2.9781;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,10:10:12.04:183,12,0	0/0:2,0:2:6.01:0,6,62	0/0:25,0:9:7.81:0,8,81	0/1:24,0:10:5.09:5,0,116	0/0:7,0:7:1.68:0,2,5	1/1:11,3:14:15.60:123,16,0	./.	1/1:24,7:31:42.20:460,42,0	0/0:8,0:8:24.07:0,24,328	1/1:4,0:4:7.96:75,8,0	0/1:5,0:5:0.48:7,0,0	1/1:1,3:4:6.01:72,6,0	1/1:3,2:5:4.62:11,5,0	1/1:2,1:3:0.89:2,1,0	0/0:9,0:9:27.09:0,27,516	0/0:10,0:10:30.09:0,30,545	0/0:13,0:12:32.66:0,33,350	0/0:6,0:6:14.99:0,15,153	0/0:8,0:7:21.05:0,21,303	0/0:5,0:5:15.05:0,15,202	0/0:7,0:7:12.04:0,12,165	./.	./.	./.	1/1:3,1:4:0.29:2,0,0	1/1:5,1:6:11.21:95,11,0	1/1:5,0:5:7.71:31,8,0	1/1:10,1:11:19.03:98,19,0
chr10	22761748	.	TAC	T	1376.67	PASS	AB=1.000;AC=32;AF=0.696;AN=46;BaseQRankSum=4.144;DP=216;FS=7.844;HRun=0;HaplotypeScore=72.0926;InbreedingCoeff=0.1485;MQ=71.77;MQ0=7;MQRankSum=0.238;QD=7.32;ReadPosRankSum=0.984;VQSLOD=2.4021;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:10:6.51:28,7,0	1/1:2,0:2:5.75:32,6,0	0/1:19,0:7:11.83:12,0,13	0/1:24,0:12:21.89:22,0,45	0/0:7,0:7:2.92:0,3,17	1/1:15,1:16:24.28:219,24,0	./.	1/1:27,1:28:62.60:569,63,0	0/1:8,0:8:27.03:58,0,27	0/1:5,0:5:3.52:15,0,4	0/1:5,0:5:0.75:1,0,12	1/1:4,0:4:5.67:35,6,0	1/1:5,0:5:5.50:20,6,0	./.	0/0:9,0:9:27.07:0,27,454	0/0:9,0:9:27.08:0,27,487	1/1:13,0:12:31.20:153,31,0	1/1:6,0:6:11.33:56,11,0	0/1:7,0:7:16.78:17,0,72	0/1:5,0:5:8.75:38,0,9	0/1:6,0:6:13.55:28,0,14	./.	./.	./.	1/1:3,1:4:7.84:95,8,0	1/1:4,0:4:9.91:54,10,0	1/1:4,1:5:5.85:21,6,0	1/1:11,0:11:13.98:51,14,0
chr10	22761750	.	CAT	C	1393.72	PASS	AB=0.847;AC=21;AF=0.438;AN=48;BaseQRankSum=-3.697;DP=214;FS=8.649;HRun=0;HaplotypeScore=72.6992;InbreedingCoeff=0.4278;MQ=74.68;MQ0=6;MQRankSum=2.698;QD=12.56;ReadPosRankSum=-1.089;VQSLOD=2.3800;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:10:9.54:0,10,49	1/1:0,2:2:6.02:76,6,0	0/0:18,0:7:0:0,0,0	0/0:23,0:13:2.67:0,3,42	0/1:3,4:7:0:0,0,0	0/1:16,0:16:27.40:39,0,27	./.	0/1:28,0:28:26.40:103,0,26	1/1:2,6:8:18.06:227,18,0	1/1:3,2:5:10.17:102,10,0	1/1:2,3:5:2.95:22,3,0	0/0:4,0:4:2.69:0,3,8	0/0:5,0:5:7.49:0,7,33	0/0:4,0:4:5.92:0,6,42	0/0:9,0:9:21.07:0,21,343	0/0:9,0:9:24.08:0,24,389	1/1:1,12:12:33.11:416,33,0	1/1:0,7:7:12.04:151,12,0	0/1:2,4:6:34.61:122,0,35	1/1:1,4:5:12.04:151,12,0	1/1:1,4:5:9.03:114,9,0	./.	./.	./.	0/1:4,0:4:4.62:30,0,5	0/0:4,0:4:3.68:0,4,17	0/0:5,0:5:7.81:0,8,33	0/0:11,0:11:18.39:0,18,84
chr10	22761849	.	CAT	C	3675.68	PASS	AB=0.933;AC=29;AF=0.580;AN=50;BaseQRankSum=6.764;DP=183;FS=14.546;HRun=0;HaplotypeScore=48.1555;InbreedingCoeff=0.8312;MQ=77.24;MQ0=3;MQRankSum=-5.986;QD=30.89;ReadPosRankSum=-0.016;VQSLOD=4.0840;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/0:3,0:3:9.03:0,9,158	0/0:9,0:6:8.29:0,8,71	0/1:13,0:10:1.58:2,0,56	1/1:0,11:11:33.11:446,33,0	1/1:3,10:13:27.09:363,27,0	1/1:1,2:3:9.03:121,9,0	1/1:9,6:15:30.01:359,30,0	0/0:4,0:4:12.04:0,12,198	1/1:0,4:4:12.04:161,12,0	1/1:0,3:3:9.03:122,9,0	1/1:0,7:7:21.07:284,21,0	1/1:1,6:7:18.06:241,18,0	1/1:1,6:7:18.06:243,18,0	0/0:5,0:5:15.05:0,15,263	0/0:2,0:2:6.02:0,6,105	0/0:16,0:16:39.08:0,39,650	0/0:7,0:7:18.06:0,18,315	0/0:8,0:8:21.07:0,21,368	0/0:1,0:1:3.01:0,3,53	0/0:5,0:5:15.05:0,15,263	./.	1/1:0,3:3:6.02:81,6,0	./.	1/1:1,9:10:30.10:403,30,0	1/1:1,7:8:21.07:284,21,0	1/1:1,5:6:18.06:243,18,0	1/1:0,8:8:24.08:324,24,0
chr10	22761871	.	T	TTA	4526.10	PASS	AB=0.765;AC=28;AF=0.500;AN=56;BaseQRankSum=5.292;DP=240;FS=5.126;HRun=0;HaplotypeScore=49.6850;InbreedingCoeff=0.7151;MQ=62.83;MQ0=2;MQRankSum=-7.482;QD=32.80;ReadPosRankSum=-2.009;VQSLOD=6.0763;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,2:2:3.01:51,3,0	0/0:4,0:4:9.03:0,9,118	0/0:16,0:10:6.01:0,6,76	0/1:11,0:7:3.51:4,0,39	0/0:19,0:19:48.14:0,48,603	1/1:2,9:11:18.06:307,18,0	1/1:3,4:7:6.02:103,6,0	1/1:0,26:26:78.27:1318,78,0	0/0:4,0:4:12.04:0,12,157	0/0:7,0:7:18.06:0,18,236	0/0:5,0:5:15.05:0,15,197	1/1:2,6:8:12.04:205,12,0	1/1:0,8:8:18.06:305,18,0	1/1:3,8:12:24.08:397,24,0	0/0:8,0:8:21.07:0,21,275	0/0:3,0:3:9.03:0,9,118	0/0:15,0:15:33.11:0,33,430	0/0:5,0:5:15.05:0,15,197	0/0:7,0:7:21.07:0,21,275	0/0:3,0:3:9.03:0,9,117	0/0:6,0:6:18.06:0,18,237	1/1:1,0:1:3.01:49,3,0	1/1:0,4:4:3.01:51,3,0	1/1:0,3:3:3.01:51,3,0	1/1:0,17:17:33.11:563,33,0	0/1:1,7:9:12.36:354,0,12	1/1:1,7:7:18.06:306,18,0	1/1:1,10:11:27.09:461,27,0
chr10	22762727	.	TC	T	2233.37	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=12.107;DP=573;FS=1.034;HRun=2;HaplotypeScore=63.3991;InbreedingCoeff=0.9344;MQ=81.73;MQ0=0;MQRankSum=-3.237;QD=35.45;ReadPosRankSum=1.386;VQSLOD=4.0705;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:51.17:0,51,764	0/0:1,0:1:3.01:0,3,45	0/0:19,0:19:51.13:0,51,710	0/0:12,0:12:27.09:0,27,389	1/1:0,14:14:42.09:526,42,0	0/0:24,0:24:66.22:0,66,989	0/0:10,0:10:27.06:0,27,363	0/0:41,0:41:99:0,117,1734	0/0:11,0:11:33.11:0,33,494	1/1:0,29:29:84.23:1071,84,0	1/1:0,20:20:60.20:778,60,0	0/0:29,0:29:87.29:0,87,1304	0/0:29,0:29:87.24:0,87,1223	0/0:22,0:22:66.22:0,66,989	0/0:24,0:24:72.20:0,72,1019	0/0:27,0:27:78.23:0,78,1112	0/0:21,0:21:63.20:0,63,923	0/0:29,0:29:87.23:0,87,1256	0/0:21,0:21:63.18:0,63,885	0/0:34,0:34:99:0,101,1469	0/0:14,0:14:42.14:0,42,629	0/0:21,0:21:63.20:0,63,926	0/0:17,0:17:51.17:0,51,764	0/0:5,0:5:15.05:0,15,225	0/0:23,0:23:69.23:0,69,1032	0/0:20,0:20:60.19:0,60,861	0/0:28,0:28:84.27:0,84,1238	0/0:9,0:9:27.09:0,27,404
chr10	22763192	.	CT	C	3584.91	PASS	AB=0.609;AC=28;AF=0.500;AN=56;BaseQRankSum=6.751;DP=616;FS=0.000;HRun=12;HaplotypeScore=78.2667;InbreedingCoeff=0.6475;MQ=67.44;MQ0=10;MQRankSum=2.194;QD=10.21;ReadPosRankSum=2.354;VQSLOD=3.1300;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:30:31.73:0,32,178	0/0:6,0:6:14.70:0,15,133	0/0:14,1:10:8.73:0,9,61	0/0:18,0:13:10.62:0,11,84	1/1:3,1:25:32.95:116,33,0	1/1:2,16:18:38.85:302,39,0	1/1:4,13:17:31.69:237,32,0	0/1:12,16:28:4.37:324,0,4	0/0:21,2:22:4.11:0,4,399	1/1:6,0:23:34.38:99,34,0	1/1:4,1:19:21.30:76,21,0	0/1:6,22:27:19.08:294,0,19	1/1:13,21:34:49.79:376,50,0	1/1:6,16:22:44.81:348,45,0	0/0:32,0:32:21.39:0,21,589	0/0:19,0:20:44.82:0,45,419	0/0:32,0:32:87.09:0,87,851	0/0:11,0:12:29.89:0,30,284	0/0:32,0:33:46.55:0,47,581	0/0:14,0:12:0.82:0,1,178	0/0:25,0:25:57.51:0,58,554	1/1:5,10:16:9.46:148,9,0	1/1:9,12:21:5.14:213,5,0	0/1:6,14:19:52.47:193,0,52	0/1:6,7:13:6.57:139,0,7	1/1:12,16:28:40.73:303,41,0	1/1:13,18:30:19.98:331,20,0	1/1:0,6:6:11.84:85,12,0
chr10	22764214	.	T	TGG	6461.37	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=2.920;DP=547;FS=2.228;HRun=7;HaplotypeScore=116.9457;InbreedingCoeff=0.9841;MQ=88.09;MQ0=1;MQRankSum=-5.153;QD=18.95;ReadPosRankSum=-2.630;VQSLOD=2.4978;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:14:21.89:208,22,0	0/0:11,0:11:33.01:0,33,366	0/0:27,0:25:63.15:0,63,704	0/0:26,0:26:35.85:0,36,359	1/1:5,30:35:90.31:1461,90,0	1/1:22,0:23:10.95:101,11,0	1/1:9,0:12:18.51:165,19,0	1/1:17,0:18:21.93:108,22,0	0/0:14,0:14:42.12:0,42,489	1/1:1,28:29:84.29:1368,84,0	1/1:1,24:25:69.24:1129,69,0	1/1:15,0:17:16.51:125,17,0	1/1:14,0:22:25.77:220,26,0	1/1:12,0:22:24.73:211,25,0	0/0:22,0:22:54.15:0,54,629	0/0:16,0:16:42.12:0,42,489	0/0:17,0:17:48.12:0,48,549	0/0:17,0:17:51.15:0,51,594	0/0:20,0:20:45.03:0,45,506	0/0:22,0:22:63.18:0,63,734	0/0:13,0:13:27.06:0,27,314	1/1:9,0:14:17.91:143,18,0	1/1:17,1:23:25.76:226,26,0	1/1:6,0:10:13.87:109,14,0	1/1:18,0:23:42.68:332,43,0	1/1:19,0:23:24.81:220,25,0	1/1:7,0:19:21.02:176,21,0	1/1:4,0:12:19.23:160,19,0
chr10	22765472	.	TA	T	2630	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=4.394;DP=580;FS=0.852;HRun=7;HaplotypeScore=94.7437;InbreedingCoeff=0.9048;MQ=72.14;MQ0=0;MQRankSum=1.567;QD=24.35;ReadPosRankSum=0.871;VQSLOD=3.6023;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,19:21:57.06:567,57,0	0/0:9,0:9:27.08:0,27,327	0/0:5,0:5:4.95:0,5,76	0/0:11,0:11:5.19:0,5,93	1/1:2,33:35:95.98:928,96,0	0/0:32,0:32:93.25:0,93,1115	0/0:10,0:10:24.06:0,24,287	0/0:31,0:31:75.22:0,75,906	0/0:11,0:11:30.10:0,30,376	1/1:4,23:27:69.11:683,69,0	1/1:3,22:25:60.13:611,60,0	0/0:10,0:10:27.09:0,27,338	0/0:25,0:25:63.15:0,63,760	0/0:20,0:20:57.18:0,57,713	0/0:26,0:26:75.21:0,75,904	0/0:24,0:24:69.22:0,69,864	0/0:35,0:35:96.28:0,96,1186	0/0:21,0:21:54.01:0,54,594	0/0:22,0:22:57.17:0,57,702	0/0:44,0:44:99:0,117,1425	0/0:2,0:2:6.02:0,6,75	0/0:15,0:15:45.13:0,45,550	0/0:25,0:25:66.19:0,66,802	0/0:17,0:17:48.14:0,48,587	0/0:25,0:25:75.23:0,75,930	0/0:22,1:23:35.60:0,36,706	0/0:23,0:23:60.18:0,60,737	0/0:6,0:6:18.06:0,18,225
chr10	22766961	.	ACT	A	1342.55	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.215;DP=688;FS=2.990;HRun=0;HaplotypeScore=83.5470;InbreedingCoeff=0.9889;MQ=89.43;MQ0=0;MQRankSum=-4.796;QD=33.56;ReadPosRankSum=0.783;VQSLOD=5.9219;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,39:40:99:1437,108,0	0/0:7,0:7:18.06:0,18,308	0/0:29,0:29:22.15:0,22,1139	0/0:23,0:23:51.58:0,52,798	0/0:25,0:25:69.24:0,69,1192	0/0:27,0:27:75.26:0,75,1295	0/0:29,0:29:81.26:0,81,1376	0/0:27,0:27:66.21:0,66,1074	0/0:14,0:14:39.13:0,39,671	0/0:22,0:22:57.19:0,57,963	0/0:17,0:17:45.15:0,45,779	0/0:29,0:29:84.29:0,84,1448	0/0:27,0:27:75.26:0,75,1288	0/0:18,0:18:51.17:0,51,883	0/0:42,0:42:99:0,120,2070	0/0:30,0:30:90.31:0,90,1555	0/0:29,0:29:81.28:0,81,1403	0/0:19,0:19:54.18:0,54,935	0/0:28,0:28:75.23:0,75,1234	0/0:19,0:19:51.17:0,51,882	0/0:34,0:34:93.32:0,93,1598	0/0:21,0:21:57.20:0,57,978	0/0:18,0:18:45.15:0,45,775	0/0:21,0:21:48.16:0,48,831	0/0:27,0:27:75.26:0,75,1283	0/0:33,0:33:96.31:0,96,1604	0/0:17,0:17:48.16:0,48,818	0/0:15,0:15:45.15:0,45,775
chr10	22767037	.	T	TA	9187.38	PASS	AB=0.533;AC=33;AF=0.589;AN=56;BaseQRankSum=-9.700;DP=628;FS=3.853;HRun=9;HaplotypeScore=72.8075;InbreedingCoeff=0.8950;MQ=76.00;MQ0=0;MQRankSum=-2.099;QD=23.03;ReadPosRankSum=2.726;VQSLOD=5.8990;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,34:39:99:1089,99,0	0/0:11,0:11:32.99:0,33,286	0/0:20,0:19:11.85:0,12,233	0/0:9,0:9:5.06:0,5,90	0/1:3,0:24:23.04:115,0,23	1/1:1,21:22:60.16:664,60,0	1/1:2,19:21:48.13:531,48,0	1/1:9,32:42:79.02:1061,79,0	0/0:17,0:17:47.99:0,48,416	1/1:0,2:26:40.40:201,40,0	1/1:3,0:25:8.45:141,8,0	1/1:1,22:23:63.17:697,63,0	1/1:3,23:26:62.84:697,63,0	1/1:2,22:24:54.11:584,54,0	0/0:33,0:33:77.90:0,78,669	0/0:20,0:20:53.97:0,54,466	0/0:30,0:30:77.97:0,78,677	0/0:29,0:29:74.94:0,75,644	0/0:17,0:18:44.02:0,44,367	0/0:22,0:22:53.98:0,54,468	0/0:20,0:20:50.97:0,51,442	1/1:2,16:18:42.11:465,42,0	1/1:3,19:22:48.13:531,48,0	1/1:0,17:17:48.13:531,48,0	1/1:3,15:18:42.11:462,42,0	1/1:3,15:18:42.11:465,42,0	1/1:3,19:22:51.13:557,51,0	1/1:0,12:12:36.10:398,36,0
chr10	22767440	.	A	ATTGCGTAATT	44324.26	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-10.837;DP=716;FS=4.474;HRun=0;HaplotypeScore=175.1018;InbreedingCoeff=0.9987;MQ=80.01;MQ0=0;MQRankSum=-18.480;QD=100.51;ReadPosRankSum=0.529;VQSLOD=4.9163;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,15:29:57.20:2823,57,0	0/0:12,0:12:36.10:0,36,1026	0/0:17,0:17:46.95:0,47,1252	0/0:32,0:32:61.55:0,62,2019	1/1:8,19:36:87.24:3532,87,0	1/1:3,20:32:72.25:3579,72,0	1/1:5,10:21:45.15:2200,45,0	1/1:12,8:33:78.22:3071,78,0	0/0:28,0:28:81.25:0,81,2369	1/1:6,13:25:63.17:2729,63,0	1/1:3,14:22:45.15:2273,45,0	1/1:4,9:21:32.86:1658,33,0	1/1:10,16:32:69.09:3348,69,0	1/1:5,17:28:60.20:2960,60,0	0/0:27,0:27:75.26:0,75,2446	0/0:34,0:34:99:0,99,2979	0/0:25,0:25:69.22:0,69,2172	0/0:21,0:21:60.21:0,60,1923	0/0:15,0:15:24.20:0,24,1140	0/0:32,0:32:93.23:0,93,2853	0/0:31,0:31:93.31:0,93,2891	1/1:5,23:31:78.22:3618,78,0	1/1:7,16:27:57.20:2762,57,0	1/1:3,10:16:22.83:854,23,0	1/1:3,14:25:45.15:2304,45,0	1/1:5,18:29:66.16:3203,66,0	1/1:3,15:25:48.16:2458,48,0	1/1:3,5:8:21.07:952,21,0
chr10	22768128	.	C	CG	1246.12	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-4.869;DP=594;FS=3.804;HRun=0;HaplotypeScore=53.6367;InbreedingCoeff=0.9878;MQ=75.57;MQ0=0;MQRankSum=-3.570;QD=40.20;ReadPosRankSum=1.594;VQSLOD=4.1496;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,31:31:84.29:1341,84,0	0/0:7,0:7:21.07:0,21,294	0/0:16,0:16:45.15:0,45,629	0/0:13,0:13:39.12:0,39,518	0/0:22,0:22:66.22:0,66,920	0/0:28,0:28:84.28:0,84,1174	0/0:16,0:16:48.16:0,48,670	0/0:41,0:41:99:0,120,1660	0/0:13,0:13:39.12:0,39,530	0/0:20,0:20:60.19:0,60,820	0/0:14,0:14:42.14:0,42,587	0/0:19,0:19:57.19:0,57,797	0/0:26,0:26:78.26:0,78,1090	0/0:22,0:22:63.21:0,63,881	0/0:24,0:24:69.21:0,69,932	0/0:23,0:23:69.23:0,69,965	0/0:21,0:21:63.21:0,63,879	0/0:19,0:19:57.19:0,57,795	0/0:24,0:24:72.22:0,72,977	0/0:21,0:21:60.19:0,60,822	0/0:44,0:44:99:0,123,1720	0/0:12,0:12:36.11:0,36,486	0/0:13,0:13:39.13:0,39,545	0/0:22,0:22:66.22:0,66,922	0/0:24,0:24:69.22:0,69,950	0/0:30,0:30:87.27:0,87,1187	0/0:23,0:23:69.23:0,69,965	0/0:6,0:6:18.06:0,18,252
chr10	22768710	.	A	AGTGTGTCT	796.86	PASS	AB=0.734;AC=14;AF=0.250;AN=56;BaseQRankSum=10.724;DP=717;FS=23.825;HRun=0;HaplotypeScore=189.4138;InbreedingCoeff=-0.1676;MQ=67.30;MQ0=8;MQRankSum=-2.595;QD=2.55;ReadPosRankSum=-5.579;VQSLOD=-0.4429;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:5,28:44:6.02:259,6,0	0/0:6,0:10:3.42:0,3,92	0/0:29,0:18:38.82:0,39,347	0/0:42,0:27:31.22:0,31,488	0/0:13,0:23:41.70:0,42,446	0/0:18,0:29:53.88:0,54,432	0/1:19,0:26:24.28:24,0,429	0/1:36,0:36:49.80:50,0,499	0/0:9,0:16:12.52:0,13,180	0/1:13,0:28:10.69:11,0,360	0/1:12,0:17:1.28:1,0,293	0/0:10,0:21:44.85:0,45,355	0/0:22,0:28:22.32:0,22,468	0/0:12,0:27:44.59:0,45,360	0/0:17,0:29:48.36:0,48,447	0/0:30,0:30:80.37:0,80,1470	0/1:14,0:27:77.52:78,0,83	0/1:7,0:14:30.73:31,0,147	0/1:14,0:19:99:108,0,225	0/1:7,0:20:57.73:71,0,58	0/0:39,0:40:38.91:0,39,438	0/0:7,0:15:35.84:0,36,353	0/0:15,0:27:38.82:0,39,421	0/0:17,0:37:54.35:0,54,553	0/1:11,0:24:57.56:58,0,113	0/1:21,0:23:99:179,0,106	0/1:12,0:25:57.49:57,0,169	0/1:4,0:8:23.10:23,0,75
chr10	22772401	.	TAA	T	7458.48	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-4.800;DP=545;FS=6.625;HRun=11;HaplotypeScore=84.6398;InbreedingCoeff=0.9882;MQ=70.59;MQ0=0;MQRankSum=-0.216;QD=26.26;ReadPosRankSum=2.489;VQSLOD=4.9177;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,11:11:30.07:318,30,0	0/0:0,0:5:12.48:0,12,43	0/0:13,0:14:25:0,25,361	0/0:11,0:11:17.24:0,17,271	0/0:23,0:23:54.10:0,54,757	1/1:1,17:18:45.11:479,45,0	1/1:1,11:12:30.07:319,30,0	1/1:1,35:36:99:1109,105,0	0/0:3,0:19:22.29:0,22,116	0/0:23,0:24:65.58:0,66,958	0/0:24,0:24:54.17:0,54,800	1/1:1,15:16:39.10:415,39,0	1/1:6,19:26:56.85:586,57,0	1/1:2,23:25:54.11:575,54,0	0/0:23,0:23:60.20:0,60,912	0/0:25,0:25:75.25:0,75,1152	0/0:2,1:27:20.98:0,21,139	0/0:3,0:16:29.94:0,30,103	0/0:1,0:9:14.97:0,15,51	0/0:6,1:27:22.43:0,22,178	0/0:0,0:14:29.94:0,30,103	1/1:2,20:22:54.09:575,54,0	1/1:2,18:20:54.13:575,54,0	1/1:1,11:12:30.07:319,30,0	1/1:1,26:27:69.11:722,69,0	1/1:3,20:23:16.96:592,17,0	1/1:2,22:25:65.90:682,66,0	1/1:2,9:11:18.03:192,18,0
chr10	22773744	.	T	TCC	3797.99	PASS	AB=0.925;AC=26;AF=0.464;AN=56;BaseQRankSum=-5.848;DP=447;FS=12.771;HRun=1;HaplotypeScore=73.5570;InbreedingCoeff=0.5545;MQ=66.98;MQ0=43;MQRankSum=3.011;QD=14.78;ReadPosRankSum=3.378;VQSLOD=-0.5181;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:18:26.89:0,27,214	0/0:7,0:6:8.50:0,8,43	0/0:30,0:21:47.19:0,47,412	0/0:46,0:12:7.13:0,7,103	1/1:23,0:22:47.84:440,48,0	1/1:22,0:17:39.03:403,39,0	0/1:17,0:15:6.01:198,0,6	1/1:25,0:24:53.59:555,54,0	0/0:14,0:11:25.66:0,26,138	0/1:16,0:15:1.04:301,0,1	1/1:14,0:14:17.25:224,17,0	1/1:16,0:14:25.54:188,26,0	1/1:17,0:14:15.53:214,16,0	0/1:10,0:9:44.79:50,0,45	0/0:13,0:12:29.92:0,30,248	0/0:9,0:9:17.11:0,17,135	0/0:11,0:10:3.51:0,4,67	0/0:12,0:12:13.06:0,13,118	0/0:8,0:7:6.22:0,6,86	0/0:13,0:13:22.17:0,22,129	0/0:8,0:7:5.80:0,6,31	0/1:3,13:16:9:44,0,9	1/1:13,0:12:30.02:298,30,0	0/1:14,0:10:27.96:80,0,28	1/1:17,0:14:33.33:298,33,0	1/1:17,0:16:26.86:353,27,0	0/1:13,0:11:4.75:86,0,5	1/1:7,0:5:8.80:65,9,0
chr10	22774510	.	CAAA	C	10228.06	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=-10.821;DP=524;FS=0.551;HRun=9;HaplotypeScore=97.7879;InbreedingCoeff=0.9687;MQ=71.20;MQ0=2;MQRankSum=-3.516;QD=33.64;ReadPosRankSum=1.064;VQSLOD=4.1579;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:2,0:20:24.18:0,24,72	0/0:2,0:6:4.98:0,5,11	0/0:17,0:14:29.02:0,29,343	0/0:13,0:10:23.22:0,23,373	1/1:4,13:17:36.07:488,36,0	1/1:2,19:21:45.14:638,45,0	1/1:0,13:13:30.10:426,30,0	1/1:3,28:31:84.20:1095,84,0	0/0:1,0:13:16.70:0,17,55	1/1:1,24:25:72.20:976,72,0	1/1:1,11:12:27.04:360,27,0	1/1:1,17:18:42.14:596,42,0	1/1:0,15:15:36.12:507,36,0	1/1:1,14:15:30.09:426,30,0	0/0:15,0:15:36.12:0,36,765	0/0:19,0:19:54.19:0,54,1125	0/0:2,0:21:19.94:0,20,45	0/0:2,0:29:32.90:0,33,91	0/0:5,0:30:35.36:0,35,93	0/0:0,0:27:32.39:0,32,72	0/0:0,0:6:7.48:0,7,17	1/1:1,12:13:30.05:403,30,0	1/1:1,17:18:45.15:635,45,0	1/1:0,14:14:30.10:426,30,0	1/1:4,23:27:54.13:744,54,0	1/1:1,22:23:66.22:934,66,0	1/1:0,28:28:78.26:1106,78,0	1/1:1,13:14:33.11:468,33,0
chr10	22774765	.	GTA	G	4210.74	PASS	AB=1.000;AC=35;AF=0.648;AN=54;BaseQRankSum=10.908;DP=291;FS=6.125;HRun=0;HaplotypeScore=34.5911;InbreedingCoeff=0.8117;MQ=74.25;MQ0=2;MQRankSum=0.415;QD=22.40;ReadPosRankSum=1.531;VQSLOD=4.1492;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:36.12:0,36,617	0/0:4,0:4:12.04:0,12,206	1/1:8,0:6:3.45:10,3,0	0/1:20,0:11:2.59:3,0,43	1/1:1,2:3:6.02:79,6,0	1/1:1,9:10:24.08:315,24,0	1/1:3,3:6:6.02:79,6,0	1/1:6,27:33:81.26:1059,81,0	0/0:5,0:5:15.05:0,15,253	1/1:1,8:9:24.06:300,24,0	1/1:1,9:10:18.06:237,18,0	1/1:0,10:10:18.06:237,18,0	1/1:0,8:8:18.06:237,18,0	1/1:2,6:8:9.03:118,9,0	0/0:12,0:12:36.12:0,36,610	0/0:8,0:8:21.06:0,21,325	0/0:17,0:17:48.14:0,48,781	0/0:20,0:20:54.17:0,54,887	0/0:14,0:13:33.11:0,33,556	./.	0/0:7,0:7:9.03:0,9,154	1/1:3,3:6:6.02:79,6,0	1/1:1,3:4:9.03:118,9,0	1/1:0,1:1:3.01:39,3,0	1/1:0,18:18:45.15:591,45,0	1/1:0,6:6:18.06:237,18,0	1/1:4,10:14:21.07:276,21,0	1/1:3,10:13:15.05:197,15,0
chr10	22775529	.	A	AAT	1491.99	PASS	AB=1.000;AC=20;AF=0.526;AN=38;BaseQRankSum=-5.178;DP=185;FS=13.252;HRun=0;HaplotypeScore=33.9010;InbreedingCoeff=0.5548;MQ=81.41;MQ0=4;MQRankSum=0.717;QD=12.03;ReadPosRankSum=-1.622;VQSLOD=1.3654;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:0,0:7:11.36:0,11,56	0/0:2,0:2:3.01:0,3,37	1/1:17,0:10:2.80:8,3,0	0/1:40,0:15:2.06:31,0,2	1/1:8,0:8:3.01:49,3,0	1/1:5,0:5:3.01:49,3,0	./.	1/1:8,13:23:44.89:685,45,0	0/0:3,0:3:9.03:0,9,111	1/1:1,4:5:12.04:191,12,0	0/1:3,0:3:30.92:38,0,31	1/1:1,4:5:9.03:147,9,0	./.	1/1:2,3:5:9.03:147,9,0	./.	0/0:2,0:2:3.01:0,3,37	0/0:17,0:17:45.13:0,45,540	0/0:16,0:16:40.37:0,40,483	0/0:7,0:7:13.28:0,13,151	./.	0/0:2,0:2:6.02:0,6,73	./.	./.	./.	./.	1/1:2,2:4:6.02:98,6,0	1/1:1,8:8:12.04:196,12,0	./.
chr10	22776222	.	A	AAC	3016.91	PASS	AB=0.704;AC=15;AF=0.268;AN=56;BaseQRankSum=-1.231;DP=743;FS=0.000;HRun=0;HaplotypeScore=148.5403;InbreedingCoeff=0.8322;MQ=66.02;MQ0=7;MQRankSum=-5.135;QD=19.59;ReadPosRankSum=-1.373;VQSLOD=3.0674;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:34:15.02:154,15,0	1/1:2,4:6:15.05:245,15,0	0/0:46,0:29:38.95:0,39,451	0/0:51,0:29:48.09:0,48,535	0/0:28,0:29:75.01:0,75,881	0/0:30,0:30:66.21:0,66,812	0/0:31,0:32:87.10:0,87,1047	0/0:39,0:39:84.25:0,84,1024	1/1:10,9:19:39.12:586,39,0	0/0:29,0:29:57.55:0,58,923	0/0:29,0:29:75.21:0,75,907	0/0:30,0:30:78.23:0,78,947	0/0:32,0:33:96.13:0,96,1158	0/0:29,0:29:66.18:0,66,796	0/0:25,0:25:57.17:0,57,702	0/0:33,1:35:44.19:0,44,1036	1/1:5,8:13:18.13:407,18,0	1/1:9,6:15:24.01:352,24,0	1/1:10,8:18:2.19:517,2,0	0/1:11,8:19:11.92:363,0,12	1/1:14,15:29:36.55:585,37,0	0/0:14,0:15:0.91:0,1,303	0/0:17,0:17:36.10:0,36,433	0/0:35,0:35:75.15:0,75,878	0/0:16,0:16:39.12:0,39,480	0/0:30,0:31:81.08:0,81,971	0/0:29,0:29:75.24:0,75,923	0/0:9,0:9:27.08:0,27,332
chr10	22776262	.	T	TACAC	4887.03	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-5.858;DP=844;FS=5.081;HRun=0;HaplotypeScore=206.0897;InbreedingCoeff=0.9754;MQ=53.23;MQ0=17;MQRankSum=-2.230;QD=35.93;ReadPosRankSum=-0.743;VQSLOD=4.4984;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:28:6.49:0,6,78	1/1:0,6:6:12.04:305,12,0	0/0:65,0:25:45.09:0,45,705	0/0:61,0:26:51.12:0,51,820	0/0:35,0:35:71.87:0,72,1247	0/0:25,0:25:69.06:0,69,1171	0/0:40,0:40:66.17:0,66,1115	0/0:52,0:50:99:0,123,2044	1/1:4,13:19:36.12:882,36,0	0/0:46,0:46:99:0,114,1972	0/0:29,0:29:69.23:0,69,1191	0/0:34,0:34:69.23:0,69,1193	0/0:37,0:37:90.13:0,90,1553	0/0:38,0:38:93.14:0,93,1611	0/0:24,0:24:63.22:0,63,1091	0/0:37,0:37:66.46:0,66,1587	1/1:5,9:17:23.27:428,23,0	1/1:5,17:23:34.37:1047,34,0	1/1:9,6:14:20.86:449,21,0	1/1:2,17:20:35.82:913,36,0	1/1:10,24:35:36.65:864,37,0	0/0:20,0:20:38.59:0,39,644	0/0:11,0:12:26.89:0,27,403	0/0:29,0:29:51.15:0,51,880	0/0:24,0:24:54.01:0,54,939	0/0:33,0:33:90.29:0,90,1517	0/0:28,0:28:72.24:0,72,1223	0/0:9,0:9:27.09:0,27,470
chr10	22776307	.	T	TAC	14361.70	PASS	AB=0.600;AC=31;AF=0.554;AN=56;BaseQRankSum=6.776;DP=862;FS=1.034;HRun=0;HaplotypeScore=174.1444;InbreedingCoeff=0.9294;MQ=54.12;MQ0=23;MQRankSum=4.343;QD=30.30;ReadPosRankSum=3.211;VQSLOD=6.2626;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:28:21.62:0,22,102	0/0:8,0:8:21.07:0,21,267	0/0:70,0:31:60.16:0,60,744	0/0:60,0:26:48.22:0,48,589	1/1:6,25:31:60.19:995,60,0	1/1:9,13:22:39.11:621,39,0	1/1:8,30:39:66.23:1094,66,0	1/1:25,28:54:82.38:1523,82,0	0/0:27,0:27:60.19:0,60,764	1/1:11,30:41:90.28:1432,90,0	1/1:11,9:20:24.08:399,24,0	1/1:6,23:30:58.08:948,58,0	1/1:8,29:37:75.26:1240,75,0	1/1:9,33:42:78.27:1292,78,0	0/0:31,0:31:87.27:0,87,1094	0/0:37,0:37:90.27:0,90,1132	0/0:21,0:21:36.12:0,36,458	0/0:22,0:22:54.24:0,54,621	0/0:19,0:16:33.56:0,34,403	0/0:25,0:25:54.09:0,54,687	0/0:39,0:39:71.95:0,72,885	0/1:5,10:15:10.74:344,0,11	1/1:4,8:12:15.04:249,15,0	1/1:8,23:31:54.15:867,54,0	1/1:6,24:30:25.35:957,25,0	1/1:9,21:30:66.23:1086,66,0	1/1:4,23:27:54.18:897,54,0	1/1:4,8:12:27.07:420,27,0
chr10	22776829	.	GT	G	6343.47	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=9.927;DP=416;FS=0.000;HRun=6;HaplotypeScore=65.2676;InbreedingCoeff=0.9475;MQ=69.22;MQ0=2;MQRankSum=-0.041;QD=27.82;ReadPosRankSum=1.621;VQSLOD=5.4452;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:52.98:0,53,391	0/0:2,0:2:6.02:0,6,79	0/0:20,0:14:15.99:0,16,379	0/0:20,0:13:24.38:0,24,267	1/1:2,17:19:51.13:547,51,0	1/1:2,17:19:45.11:484,45,0	1/1:0,8:8:18.05:193,18,0	1/1:5,20:25:61.38:640,61,0	0/0:6,0:6:18.06:0,18,237	1/1:0,17:17:51.13:548,51,0	1/1:1,16:17:48.12:516,48,0	1/1:0,10:10:27.07:290,27,0	1/1:0,9:9:21.05:226,21,0	1/1:0,8:7:18.05:193,18,0	0/0:6,0:6:18.06:0,18,236	0/0:8,0:8:24.08:0,24,316	0/0:32,0:32:93.30:0,93,1222	0/0:31,0:31:88.82:0,89,1127	0/0:18,0:18:54.17:0,54,698	0/0:18,0:18:48.16:0,48,632	0/0:1,0:1:3.01:0,3,39	1/1:0,4:4:12.03:129,12,0	1/1:0,6:6:18.05:193,18,0	1/1:0,11:11:33.08:354,33,0	1/1:1,19:20:45.11:484,45,0	1/1:2,15:17:45.11:484,45,0	1/1:0,28:28:75.19:806,75,0	1/1:2,8:10:24.06:258,24,0
chr10	22776839	.	TTGTTG	T	1167.34	PASS	AB=1.000;AC=14;AF=0.250;AN=56;BaseQRankSum=-2.055;DP=442;FS=0.000;HRun=0;HaplotypeScore=122.6819;InbreedingCoeff=-0.1361;MQ=69.97;MQ0=2;MQRankSum=-1.685;QD=6.41;ReadPosRankSum=-5.623;VQSLOD=0.2694;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:3,25:28:54.06:1001,54,0	0/0:2,0:2:6.02:0,6,179	0/0:24,0:13:21.88:0,22,469	0/0:28,0:18:46.22:0,46,595	0/1:18,0:18:30.37:30,0,226	0/1:19,0:19:5.48:5,0,226	0/1:10,0:10:11.09:11,0,74	0/1:23,0:23:96.99:97,0,238	0/0:7,0:7:21.06:0,21,582	0/0:18,0:18:8.36:0,8,249	0/1:18,0:18:0.49:0,0,285	0/1:11,0:11:51.75:52,0,98	0/1:8,0:8:6.14:6,0,100	0/1:8,0:7:37.04:37,0,66	0/0:6,0:6:18.06:0,18,539	0/0:9,0:9:27.08:0,27,765	0/0:40,0:40:99:0,114,2930	0/0:33,0:33:78.70:0,79,2340	0/0:15,0:15:45.13:0,45,1170	0/0:18,0:18:54.14:0,54,1417	0/0:2,0:2:2.96:0,3,93	0/1:5,0:5:13.14:13,0,62	0/1:7,0:7:5.19:5,0,102	0/0:11,0:10:2.75:0,3,161	0/1:18,0:18:37.30:37,0,161	0/0:15,0:15:44.31:0,44,288	0/0:32,0:31:13.59:0,14,468	0/1:9,0:9:20.24:20,0,113
chr10	22777015	.	A	AG	177.04	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=1.756;DP=446;FS=10.548;HRun=0;HaplotypeScore=100.1152;InbreedingCoeff=0.9727;MQ=63.32;MQ0=6;MQRankSum=-3.523;QD=16.09;ReadPosRankSum=0.212;VQSLOD=5.0818;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,9:11:24.44:270,24,0	0/0:9,0:9:21.06:0,21,276	0/0:14,0:8:24.05:0,24,282	0/0:20,0:11:29.98:0,30,353	0/0:12,0:12:32.15:0,32,190	0/0:18,0:18:49.78:0,50,291	0/0:11,0:11:23.43:0,23,141	0/0:38,0:38:99:0,101,588	0/0:7,0:7:21.06:0,21,275	0/0:21,0:21:55.30:0,55,277	0/0:11,0:11:30.65:0,31,187	0/0:19,0:19:50.58:0,51,291	0/0:17,0:17:44.01:0,44,266	0/0:13,0:12:32.29:0,32,210	0/0:18,0:18:54.18:0,54,754	0/0:14,0:14:42.13:0,42,559	0/0:29,0:29:87.28:0,87,1192	0/0:18,0:18:51.14:0,51,690	0/0:20,0:20:57.19:0,57,783	0/0:10,0:10:27.09:0,27,372	0/0:6,0:6:18.06:0,18,252	0/0:8,0:8:23.48:0,23,155	0/0:12,0:12:35.12:0,35,206	0/0:15,0:15:43.95:0,44,263	0/0:17,0:17:45.96:0,46,259	0/0:17,0:17:49.29:0,49,294	0/0:28,0:28:73.23:0,73,445	0/0:13,0:13:30.84:0,31,233
chr10	22777088	.	TTCTTA	T	285.80	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=1.652;DP=617;FS=3.723;HRun=0;HaplotypeScore=167.3323;InbreedingCoeff=0.9903;MQ=84.70;MQ0=0;MQRankSum=-4.184;QD=25.98;ReadPosRankSum=-0.689;VQSLOD=2.9590;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,9:11:18.06:376,18,0	0/0:10,0:10:30.10:0,30,930	0/0:21,0:21:60.20:0,60,1791	0/0:18,0:18:45.14:0,45,1273	0/0:33,0:33:87.30:0,87,2684	0/0:22,0:22:66.23:0,66,1963	0/0:21,0:21:63.22:0,63,1953	0/0:38,0:38:96.32:0,96,2619	0/0:19,0:19:57.20:0,57,1767	0/0:25,0:25:75.25:0,75,2192	0/0:18,0:18:48.16:0,48,1487	0/0:25,0:25:75.24:0,75,2246	0/0:29,0:29:84.29:0,84,2583	0/0:21,0:21:54.17:0,54,1594	0/0:30,0:30:87.30:0,87,2697	0/0:18,0:18:54.19:0,54,1645	0/0:15,0:15:42.13:0,42,1232	0/0:14,0:14:36.12:0,36,1115	0/0:20,0:20:57.20:0,57,1694	0/0:33,0:33:93.31:0,93,2815	0/0:26,0:26:78.27:0,78,2418	0/0:16,0:16:48.16:0,48,1456	0/0:20,0:20:60.21:0,60,1842	0/0:20,0:20:60.19:0,60,1747	0/0:26,0:26:69.24:0,69,2083	0/0:23,0:23:63.22:0,63,1882	0/0:36,0:36:99:0,108,3324	0/0:9,0:9:27.09:0,27,837
chr10	22777619	.	CT	C	8760.63	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=19.133;DP=645;FS=0.616;HRun=5;HaplotypeScore=114.2739;InbreedingCoeff=0.9945;MQ=80.33;MQ0=0;MQRankSum=-4.904;QD=29.80;ReadPosRankSum=1.335;VQSLOD=4.1966;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:66.22:0,66,902	0/0:6,0:6:18.06:0,18,246	0/0:21,0:21:54.11:0,54,695	0/0:14,0:14:41.96:0,42,501	0/0:36,0:36:99:0,105,1404	1/1:1,25:26:75.21:850,75,0	1/1:0,15:15:33.09:374,33,0	1/1:5,21:26:63.18:714,63,0	0/0:21,0:21:63.21:0,63,860	0/0:35,0:35:99:0,102,1395	0/0:24,0:24:66.22:0,66,897	1/1:3,29:32:84.24:952,84,0	1/1:2,23:25:66.19:748,66,0	1/1:0,20:20:54.15:612,54,0	0/0:32,0:32:87.26:0,87,1158	0/0:27,0:27:78.26:0,78,1066	0/0:25,0:25:69.21:0,69,926	0/0:9,0:9:27.09:0,27,369	0/0:18,0:18:45.13:0,45,585	0/0:41,0:41:99:0,117,1549	0/0:14,0:14:42.11:0,42,541	1/1:0,17:17:45.13:510,45,0	1/1:1,22:23:66.19:746,66,0	1/1:0,24:24:69.20:782,69,0	1/1:3,22:25:63.18:714,63,0	1/1:3,25:28:75.20:840,75,0	1/1:3,25:28:69.20:782,69,0	1/1:1,4:5:12.03:136,12,0
chr10	22779396	.	ATGAGAGAG	A	851.16	PASS	AB=0.965;AC=8;AF=0.143;AN=56;BaseQRankSum=10.069;DP=618;FS=17.125;HRun=0;HaplotypeScore=163.2342;InbreedingCoeff=-0.1718;MQ=55.61;MQ0=16;MQRankSum=-9.468;QD=5.04;ReadPosRankSum=-2.046;VQSLOD=1.5547;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:37:36.44:0,36,426	0/0:6,0:6:15.01:0,15,227	0/0:24,0:9:10.36:0,10,179	0/0:43,0:12:13.72:0,14,193	0/0:16,0:16:32.94:0,33,345	0/1:18,0:18:78.50:78,0,233	0/1:14,9:23:27.01:27,0,234	0/0:31,0:31:44.08:0,44,649	0/0:18,0:22:50.53:0,51,741	0/0:18,0:18:53.70:0,54,1101	0/0:10,0:10:22.24:0,22,477	0/0:27,0:27:35.67:0,36,458	0/1:27,0:27:99:142,0,305	0/1:22,0:22:99:210,0,187	0/0:32,0:32:77.90:0,78,1661	0/0:27,0:27:77.81:0,78,1579	0/0:24,0:24:52.05:0,52,817	0/0:17,0:16:14.55:0,15,246	0/0:23,0:22:48.84:0,49,747	0/0:21,0:21:44.87:0,45,754	0/0:17,0:17:41.18:0,41,690	0/1:22,0:22:99:125,0,360	0/0:15,0:14:19.89:0,20,169	0/0:29,0:29:40.71:0,41,332	0/1:16,0:16:99:128,0,217	0/1:24,0:24:67.42:67,0,619	0/1:17,0:17:99:209,0,173	0/0:8,0:8:23.91:0,24,188
chr10	22779397	.	TGAGAGAGA	T	1654.67	PASS	AB=0.794;AC=19;AF=0.352;AN=54;BaseQRankSum=4.446;DP=627;FS=13.144;HRun=0;HaplotypeScore=161.0163;InbreedingCoeff=0.3805;MQ=54.07;MQ0=16;MQRankSum=-6.282;QD=5.44;ReadPosRankSum=-1.933;VQSLOD=1.6933;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:24,2:36:14.61:15,0,41	0/0:7,0:7:9.03:0,9,113	./.	0/0:42,0:11:0.47:0,0,1	0/0:21,0:21:3.01:0,3,87	0/1:12,4:18:50.66:144,0,51	1/1:21,1:22:3:75,3,0	1/1:32,0:31:5.78:71,6,0	0/0:21,0:21:21.07:0,21,415	0/0:19,0:19:27.09:0,27,667	0/0:9,0:11:12.04:0,12,370	0/1:21,0:26:14.45:14,0,97	1/1:20,7:27:14.77:260,15,0	1/1:13,6:20:17.88:334,18,0	0/0:27,0:32:33.39:0,33,1175	0/0:26,0:26:36.12:0,36,1111	0/0:24,0:27:30.92:0,31,581	0/0:16,0:15:3.01:0,3,67	0/0:23,0:23:19.30:0,19,341	0/0:25,0:25:18.06:0,18,463	0/0:18,0:18:24.08:0,24,494	0/1:15,7:22:62.80:213,0,63	0/1:10,5:14:0:0,0,0	0/1:25,4:29:0.22:0,0,0	1/1:13,3:16:9.03:216,9,0	0/1:20,5:25:99:170,0,159	1/1:13,2:16:15.05:307,15,0	0/0:9,0:9:1.82:0,2,5
chr10	22781410	.	T	TTGTGTG	6097.78	PASS	AB=0.789;AC=30;AF=0.577;AN=52;BaseQRankSum=-3.203;DP=624;FS=5.085;HRun=0;HaplotypeScore=160.8083;InbreedingCoeff=0.6278;MQ=49.98;MQ0=13;MQRankSum=-6.062;QD=15.68;ReadPosRankSum=-5.234;VQSLOD=2.4021;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:0.66:0,1,642	0/0:3,0:3:9.03:0,9,107	./.	0/1:47,0:12:6.82:7,0,76	1/1:9,0:28:10.82:85,11,0	1/1:21,5:28:45.12:941,45,0	1/1:14,1:15:18.05:271,18,0	1/1:35,0:35:38.03:544,38,0	0/0:15,0:14:25.73:0,26,293	0/1:12,0:30:60.88:61,0,136	0/1:11,0:33:51.44:51,0,99	1/1:8,4:14:27.07:612,27,0	1/1:19,2:21:36.09:800,36,0	1/1:5,12:17:15.02:443,15,0	0/0:13,0:13:27.09:0,27,549	0/0:30,0:30:78.22:0,78,1537	0/0:15,0:12:27.01:0,27,295	0/1:18,0:19:57.11:57,0,277	0/0:13,0:13:20.96:0,21,276	0/0:25,0:25:36.90:0,37,488	0/0:32,0:32:36.05:0,36,408	./.	1/1:11,0:11:20.94:340,21,0	1/1:12,1:15:13.28:168,13,0	1/1:18,2:20:24.95:467,25,0	1/1:13,2:16:29.34:723,29,0	1/1:15,7:25:20.60:389,21,0	1/1:12,0:13:9.02:138,9,0
chr10	22781435	.	A	AGT	2944.48	PASS	AB=0.887;AC=17;AF=0.315;AN=54;BaseQRankSum=-2.154;DP=620;FS=17.226;HRun=0;HaplotypeScore=150.8815;InbreedingCoeff=0.0754;MQ=51.03;MQ0=11;MQRankSum=-0.286;QD=9.88;ReadPosRankSum=2.162;VQSLOD=2.6250;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:38:47.94:0,48,397	1/1:8,1:9:14.72:213,15,0	0/0:51,0:13:22.08:0,22,170	0/1:59,0:18:21.30:21,0,116	0/0:29,0:29:28.41:0,28,215	0/1:23,0:23:21.36:21,0,169	0/0:14,0:15:11.91:0,12,118	0/0:46,0:46:70.23:0,70,818	0/1:11,5:15:33.98:273,0,34	0/0:26,0:26:19.59:0,20,325	0/1:31,0:31:58.01:58,0,145	0/0:18,0:18:25.87:0,26,262	0/1:16,0:16:43.25:43,0,197	0/0:17,0:17:16.83:0,17,201	0/0:12,0:12:33.10:0,33,400	0/0:31,0:31:75.19:0,75,899	0/1:9,8:14:3.55:433,0,4	0/1:11,7:18:15.46:392,0,15	1/1:8,3:11:18.06:270,18,0	1/1:8,16:24:26.56:926,27,0	0/1:8,16:24:52.68:363,0,53	./.	0/0:14,0:14:15:0,15,141	0/0:13,0:12:10.70:0,11,64	0/1:17,0:17:50.99:51,0,59	0/1:14,0:14:42.88:43,0,131	0/1:19,0:19:8.21:8,0,203	0/0:6,0:6:7.26:0,7,79
chr10	22781481	.	T	TTA	9249.98	PASS	AB=0.614;AC=38;AF=0.679;AN=56;BaseQRankSum=-7.202;DP=473;FS=3.897;HRun=0;HaplotypeScore=104.0607;InbreedingCoeff=0.7504;MQ=70.45;MQ0=3;MQRankSum=-1.874;QD=32.23;ReadPosRankSum=2.203;VQSLOD=7.2358;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:37.83:0,38,457	1/1:0,10:10:23.99:398,24,0	0/0:14,0:13:5.64:0,6,52	0/0:16,0:12:11.72:0,12,108	0/0:35,0:36:62.38:0,62,706	1/1:4,17:21:45.15:747,45,0	1/1:2,8:10:21.07:348,21,0	1/1:8,41:50:91.35:1867,91,0	1/1:2,9:11:27.09:441,27,0	0/0:37,0:37:94.21:0,94,1179	0/0:21,0:21:36:0,36,392	1/1:4,12:16:33.11:547,33,0	1/1:4,14:18:39.13:633,39,0	1/1:4,8:12:24.08:399,24,0	0/0:18,0:18:46.95:0,47,560	0/0:19,0:19:36.09:0,36,427	1/1:5,10:15:27.09:433,27,0	1/1:6,7:12:29.69:429,30,0	0/1:5,8:14:18.91:342,0,19	1/1:8,11:20:33.10:508,33,0	1/1:4,0:4:3.01:46,3,0	1/1:1,2:3:3.01:50,3,0	1/1:6,7:13:19.75:279,20,0	1/1:2,5:7:9.03:150,9,0	1/1:3,11:14:24:398,24,0	0/1:4,9:12:45.61:368,0,46	1/1:5,11:16:36.10:568,36,0	1/1:0,7:6:18.06:299,18,0
chr10	22781721	.	T	TC	12366.81	PASS	AC=50;AF=0.926;AN=54;BaseQRankSum=-2.848;DP=330;FS=11.204;HRun=1;HaplotypeScore=88.8151;InbreedingCoeff=0.5973;MQ=42.55;MQ0=0;MQRankSum=-2.982;QD=38.77;ReadPosRankSum=2.223;VQSLOD=4.7025;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,7:7:18.06:269,18,0	1/1:0,7:7:21.07:314,21,0	0/0:2,0:2:3.26:0,3,10	0/0:3,0:3:0.46:0,0,19	1/1:1,14:15:21.02:289,21,0	1/1:0,21:20:54.14:783,54,0	1/1:1,7:8:15.05:224,15,0	1/1:4,9:13:33.11:493,33,0	1/1:1,19:20:57.19:855,57,0	1/1:0,24:24:72.24:1069,72,0	1/1:0,13:13:36.12:538,36,0	1/1:0,15:15:42.14:628,42,0	1/1:0,17:17:51.17:762,51,0	1/1:0,18:18:54.14:783,54,0	1/1:1,14:15:39.13:583,39,0	1/1:0,14:14:42.11:604,42,0	1/1:0,5:5:12.04:180,12,0	1/1:0,3:3:9.03:135,9,0	1/1:2,9:11:27.08:385,27,0	1/1:1,20:21:60.20:897,60,0	1/1:1,4:5:9.01:134,9,0	1/1:0,5:5:12.04:179,12,0	1/1:0,15:15:18.06:268,18,0	./.	1/1:1,17:18:51.13:738,51,0	1/1:0,16:16:48.16:718,48,0	1/1:0,11:11:30.09:449,30,0	1/1:0,2:2:6.02:90,6,0
chr10	22783014	.	CATAT	C	2769.61	PASS	AB=0.827;AC=22;AF=0.500;AN=44;BaseQRankSum=-0.614;DP=263;FS=1.954;HRun=0;HaplotypeScore=57.6400;InbreedingCoeff=0.4134;MQ=79.55;MQ0=3;MQRankSum=-1.687;QD=18.59;ReadPosRankSum=0.301;VQSLOD=3.1835;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:4:1.82:0,2,5	./.	0/0:14,0:9:1.25:0,1,3	0/0:30,0:14:1.36:0,1,4	0/1:5,0:5:0:0,0,0	1/1:6,11:18:33.10:494,33,0	1/1:5,3:8:9.03:147,9,0	1/1:16,6:29:42.08:525,42,0	0/0:5,0:6:3.01:0,3,52	./.	./.	1/1:7,2:10:9:114,9,0	1/1:4,5:10:21.06:306,21,0	1/1:5,2:8:2.42:160,2,0	0/0:5,0:5:12.04:0,12,292	0/1:6,1:7:36.94:37,0,207	0/0:11,0:13:8.96:0,9,123	0/0:9,0:11:12.03:0,12,189	./.	./.	0/0:7,0:7:3.01:0,3,50	1/1:3,1:4:3.01:49,3,0	./.	0/0:4,0:4:0:0,0,0	0/1:6,3:10:0.58:133,0,1	1/1:6,7:15:33.09:470,33,0	0/1:11,4:18:26.14:284,0,26	1/1:0,5:7:4.46:190,4,0
chr10	22783077	.	CCACACA	C	2009.29	PASS	AB=0.935;AC=31;AF=0.646;AN=48;BaseQRankSum=-2.306;DP=326;FS=16.428;HRun=0;HaplotypeScore=84.7132;InbreedingCoeff=0.2835;MQ=49.27;MQ0=24;MQRankSum=-4.067;QD=9.13;ReadPosRankSum=0.323;VQSLOD=0.4348;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:9,0:8:48.26:56,0,48	./.	./.	./.	0/0:10,0:9:6.02:0,6,151	1/1:16,4:21:14.15:375,14,0	1/1:9,0:9:2.84:53,3,0	1/1:21,0:21:2.96:20,3,0	1/1:0,0:2:3.01:42,3,0	0/0:6,0:6:11.99:0,12,122	0/0:3,0:5:5.47:0,5,122	1/1:3,8:12:11.59:225,12,0	1/1:4,2:6:12.04:243,12,0	1/1:5,4:8:8.67:163,9,0	0/0:0,0:4:6.02:0,6,157	0/0:3,0:6:9.03:0,9,204	1/1:15,0:13:4.26:45,4,0	0/1:13,0:12:54.86:59,0,55	0/0:9,0:9:5.92:0,6,33	0/1:7,0:9:5.82:11,0,6	1/1:23,0:20:4.15:15,4,0	1/1:2,2:5:0.89:2,1,0	./.	1/1:7,0:7:0.44:1,0,0	1/1:7,10:19:16.22:309,16,0	0/1:17,2:19:40.44:283,0,40	1/1:4,3:9:11.72:225,12,0	0/1:5,0:6:29.63:36,0,30
chr10	22784450	.	TAC	T	4544.95	PASS	AB=0.827;AC=28;AF=0.519;AN=54;BaseQRankSum=2.545;DP=795;FS=1.415;HRun=0;HaplotypeScore=120.2172;InbreedingCoeff=0.3393;MQ=55.84;MQ0=12;MQRankSum=0.508;QD=9.11;ReadPosRankSum=2.554;VQSLOD=4.4502;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:49,1:52:26.69:0,27,1161	0/1:4,0:11:0.10:0,0,44	0/0:34,0:14:6.02:0,6,85	./.	0/0:10,0:26:36.01:0,36,352	1/1:10,13:24:32.72:336,33,0	0/1:16,15:33:20.36:266,0,20	1/1:25,12:37:2.72:189,3,0	1/1:11,0:23:4.15:14,4,0	0/0:14,0:26:40.75:0,41,402	0/0:9,0:22:35.45:0,35,329	0/1:7,17:24:5.32:328,0,5	1/1:8,21:30:6.19:463,6,0	1/1:10,23:36:51.24:736,51,0	0/1:40,4:44:91.33:91,0,859	0/0:19,0:22:11.30:0,11,482	0/0:15,0:30:7.82:0,8,58	0/0:4,0:19:3:0,3,26	0/1:19,0:19:16.99:17,0,124	0/0:21,0:22:4.39:0,4,27	0/1:37,0:35:6.95:7,0,61	0/1:9,9:21:22.59:176,0,23	1/1:10,15:26:26.98:309,27,0	1/1:11,27:39:30.23:633,30,0	1/1:9,14:23:24.05:275,24,0	1/1:12,12:28:23.90:368,24,0	1/1:12,14:27:29.48:280,29,0	0/1:11,3:14:34.82:60,0,35
chr10	22785293	.	TGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGA	T	5965.88	PASS	AB=0.956;AC=27;AF=0.500;AN=54;BaseQRankSum=2.973;DP=476;FS=9.875;HRun=0;HaplotypeScore=348.1766;InbreedingCoeff=0.5141;MQ=70.07;MQ0=15;MQRankSum=-3.545;QD=20.02;ReadPosRankSum=6.385;VQSLOD=1.8635;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:25:29.10:0,29,273	./.	0/0:16,0:13:1.25:0,1,3	0/0:20,0:18:2.94:0,3,30	0/0:6,0:6:3:0,3,25	1/1:13,0:13:9.03:169,9,0	1/1:30,0:29:38.62:543,39,0	1/1:22,0:21:2.64:78,3,0	0/0:8,0:8:15.02:0,15,383	0/0:9,0:7:5.96:0,6,76	0/0:7,0:7:5.81:0,6,211	1/1:10,23:32:9.03:817,9,0	1/1:24,0:24:48.02:658,48,0	1/1:25,0:25:45.10:737,45,0	0/1:10,0:10:47.27:47,0,112	0/1:16,0:16:28.54:29,0,124	0/0:10,0:9:8.68:0,9,74	0/0:11,0:11:9.02:0,9,188	0/0:10,0:8:6:0,6,52	0/1:11,2:12:25.33:264,0,25	0/0:28,0:25:6.75:0,7,215	1/1:8,18:26:11.83:785,12,0	0/0:9,14:22:0.43:0,0,3	1/1:17,0:17:14.95:202,15,0	1/1:13,0:13:9.02:130,9,0	1/1:13,14:26:32.90:399,33,0	1/1:9,14:22:5.97:291,6,0	1/1:0,6:6:9.03:817,9,0
chr10	22785324	.	GGA	G	135.90	PASS	AB=0.971;AC=14;AF=0.269;AN=52;BaseQRankSum=4.152;DP=274;FS=21.114;HRun=0;HaplotypeScore=68.3387;InbreedingCoeff=-0.0446;MQ=50.98;MQ0=32;MQRankSum=0.231;QD=1.03;ReadPosRankSum=1.282;VQSLOD=-0.1908;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:11:20.44:0,20,206	./.	0/1:12,0:1:0:0,0,0	0/0:13,0:5:2.76:0,3,38	./.	0/1:5,0:5:27.87:28,0,83	0/0:14,1:12:0.66:0,1,207	0/1:3,2:4:9.62:19,0,10	0/0:6,0:6:0.06:0,0,138	0/0:4,0:2:5.95:0,6,55	0/0:2,0:1:3.01:0,3,37	1/1:24,0:23:8.52:42,9,0	0/1:15,0:15:37.16:37,0,289	0/0:13,1:14:8.70:0,9,312	0/1:5,0:4:13.75:14,0,98	0/0:9,0:9:21.74:0,22,238	0/0:6,0:5:8.99:0,9,91	0/0:7,0:7:16.60:0,17,181	0/0:8,0:2:6.02:0,6,74	0/1:6,0:4:8.06:8,0,31	0/0:15,0:9:14.99:0,15,168	0/1:20,0:19:13.97:19,0,14	0/0:15,0:14:0.13:0,0,1	0/0:11,0:10:5.98:0,6,59	0/1:4,0:3:30.70:31,0,64	0/1:15,0:14:27.20:27,0,67	0/1:15,0:15:8.16:8,0,14	1/1:6,0:6:8.52:42,9,0
chr10	22785378	.	G	GTAA	2986.11	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-4.206;DP=574;FS=6.206;HRun=0;HaplotypeScore=108.6749;InbreedingCoeff=0.9930;MQ=87.68;MQ0=1;MQRankSum=-3.756;QD=46.66;ReadPosRankSum=0.238;VQSLOD=5.5231;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,23:25:66.18:1342,66,0	0/0:8,0:8:24.08:0,24,371	0/0:20,0:20:54.15:0,54,793	0/0:30,0:28:62.72:0,63,897	1/1:2,7:10:15:277,15,0	0/0:23,0:23:69.23:0,69,1067	0/0:26,0:26:72.21:0,72,1079	0/0:34,0:34:81.26:0,81,1213	0/0:18,0:18:51.16:0,51,757	1/1:2,14:18:51.12:1012,51,0	1/1:2,9:11:24.08:515,24,0	0/0:30,0:30:63.21:0,63,953	0/0:20,0:20:57.19:0,57,881	0/0:24,0:24:69.23:0,69,1051	0/0:17,0:17:45.15:0,45,696	0/0:23,0:23:66.22:0,66,1021	0/0:17,0:17:42.14:0,42,649	0/0:13,0:13:36.12:0,36,555	0/0:10,0:10:30.06:0,30,403	0/0:16,0:16:45.15:0,45,696	0/0:33,0:33:93.32:0,93,1438	0/0:25,0:25:60.20:0,60,928	0/0:20,0:20:48.16:0,48,743	0/0:14,0:14:20.94:0,21,367	0/0:24,0:24:72.22:0,72,1081	0/0:23,0:23:69.23:0,69,1068	0/0:24,0:24:48.16:0,48,731	0/0:17,0:17:42.10:0,42,609
chr10	22785941	.	AT	A	2797.57	PASS	AB=0.933;AC=22;AF=0.393;AN=56;BaseQRankSum=10.617;DP=512;FS=5.351;HRun=12;HaplotypeScore=58.5702;InbreedingCoeff=0.7738;MQ=73.84;MQ0=1;MQRankSum=0.181;QD=13.78;ReadPosRankSum=3.369;VQSLOD=4.0963;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:17,1:18:21.85:0,22,401	1/1:2,8:10:23.89:186,24,0	0/0:19,0:16:26.92:0,27,212	0/0:8,1:8:2.31:0,2,33	1/1:5,26:31:65.64:510,66,0	0/0:18,0:19:41.92:0,42,407	0/1:11,2:13:22.43:22,0,159	0/0:41,0:41:94.85:0,95,899	1/1:3,11:15:4.46:208,4,0	1/1:4,16:20:41.79:325,42,0	1/1:6,15:22:43.81:331,44,0	0/0:11,0:11:24.03:0,24,236	0/0:16,0:16:48.06:0,48,473	0/0:16,0:16:39.07:0,39,391	0/0:23,0:23:63.13:0,63,639	0/0:16,3:19:1.62:0,2,374	1/1:2,10:12:29.87:232,30,0	1/1:2,13:15:8.44:248,8,0	1/1:4,11:15:29.84:227,30,0	1/1:2,22:27:37.43:434,37,0	1/1:1,14:15:35.86:279,36,0	0/0:12,1:14:21.03:0,21,207	0/0:18,2:21:18.61:0,19,329	0/1:6,0:8:5.47:5,0,102	0/0:23,0:23:18.18:0,18,510	0/0:22,0:22:48.09:0,48,483	0/0:24,2:26:16.64:0,17,521	0/0:8,0:8:18.02:0,18,176
chr10	22787171	.	TTGTG	T	1314.13	PASS	AB=0.949;AC=14;AF=0.259;AN=54;BaseQRankSum=1.084;DP=687;FS=1.250;HRun=0;HaplotypeScore=182.9943;InbreedingCoeff=0.4964;MQ=55.06;MQ0=20;MQRankSum=-2.931;QD=5.45;ReadPosRankSum=1.289;VQSLOD=2.8813;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:26:12.47:132,12,0	0/0:6,0:6:10.06:0,10,116	./.	0/0:31,0:14:0:0,0,0	1/1:23,7:30:29.72:348,30,0	0/0:17,0:17:6.01:0,6,75	0/0:30,0:29:20.46:0,20,225	0/0:38,0:37:24.41:0,24,293	0/0:20,0:22:20.92:0,21,213	1/1:18,5:25:18.48:473,18,0	1/1:16,5:23:23.81:286,24,0	0/0:21,0:24:23.83:0,24,344	0/0:21,0:19:15.76:0,16,160	0/0:15,0:16:8.76:0,9,55	0/1:31,1:33:21.35:21,0,1303	0/1:26,0:28:33.47:33,0,618	0/0:26,0:25:22.71:0,23,299	0/1:18,0:18:17.78:18,0,270	1/1:25,0:24:24.33:117,24,0	0/0:19,0:19:7.54:0,8,92	0/0:41,0:40:10.92:0,11,151	0/0:18,0:18:7.31:0,7,149	0/0:18,0:18:6.62:0,7,28	0/0:26,0:28:13.45:0,13,142	0/0:26,0:26:21.92:0,22,272	0/1:28,1:30:60.55:61,0,203	0/0:18,0:20:13.49:0,13,178	0/0:13,0:10:5.96:0,6,43
chr10	22787187	.	GTGT	G	560.22	PASS	AB=1.000;AC=4;AF=0.071;AN=56;BaseQRankSum=5.886;DP=663;FS=5.399;HRun=0;HaplotypeScore=182.9467;InbreedingCoeff=0.3513;MQ=47.60;MQ0=28;MQRankSum=-3.898;QD=8.00;ReadPosRankSum=4.140;VQSLOD=2.5483;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:26:19.38:19,0,139	0/0:6,0:6:12.04:0,12,210	0/0:24,0:11:25.09:0,25,366	0/0:34,0:8:23.48:0,23,249	0/0:30,0:30:11.19:0,11,403	0/0:15,0:15:24.08:0,24,362	0/0:31,0:30:44.97:0,45,703	0/0:35,0:34:96.31:0,96,1440	0/0:22,0:22:54.18:0,54,801	0/1:24,0:24:17.56:18,0,374	0/0:21,0:21:2.40:0,2,348	0/0:26,0:26:57.19:0,57,906	0/0:21,0:18:45.13:0,45,661	0/0:15,0:15:21.07:0,21,315	0/0:32,0:32:69.87:0,70,1690	0/0:23,0:23:60.01:0,60,1058	0/0:23,0:22:54.62:0,55,793	0/0:22,0:21:31.21:0,31,710	1/1:8,5:17:40.94:637,41,0	0/0:16,0:16:29.85:0,30,448	0/0:40,0:39:74.23:0,74,1031	0/0:21,0:21:1.75:0,2,420	0/0:18,0:17:21.06:0,21,284	0/0:32,0:32:41.90:0,42,627	0/0:32,0:31:60.07:0,60,967	0/0:26,0:25:51.45:0,51,931	0/0:15,0:15:24.08:0,24,397	0/0:13,0:10:27.09:0,27,364
chr10	22787210	.	T	TGTGTGC	3924.55	PASS	AB=0.986;AC=27;AF=0.482;AN=56;BaseQRankSum=-0.864;DP=636;FS=3.298;HRun=0;HaplotypeScore=235.1897;InbreedingCoeff=-0.2381;MQ=55.17;MQ0=14;MQRankSum=-1.456;QD=7.90;ReadPosRankSum=-2.253;VQSLOD=2.1453;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:24:21.99:22,0,99	1/1:6,1:8:15.01:293,15,0	0/0:20,0:13:5.52:0,6,158	0/1:22,0:11:24.53:25,0,38	0/0:24,0:24:23.05:0,23,261	0/0:22,0:21:37.94:0,38,228	0/1:30,0:29:41.88:42,0,98	0/1:28,0:28:54.88:55,0,306	1/1:23,1:25:59.66:678,60,0	0/1:21,0:20:93.26:93,0,277	0/0:18,0:18:10.78:0,11,226	0/1:23,0:23:99:200,0,139	0/1:20,0:17:86.40:166,0,86	0/1:19,0:19:33.74:34,0,89	0/0:32,0:32:73.44:0,73,1208	0/0:23,0:23:33.16:0,33,678	1/1:12,4:17:11.69:423,12,0	0/1:14,3:20:31.53:424,0,32	0/1:16,0:15:64.27:119,0,64	1/1:18,0:18:22.69:240,23,0	1/1:39,0:38:65.48:632,65,0	0/1:29,0:29:60.34:60,0,146	0/1:23,0:22:71.77:72,0,108	0/1:35,0:35:29.51:30,0,162	0/1:30,0:30:50.52:51,0,196	0/1:25,0:25:99:139,0,227	0/1:17,0:17:68.23:117,0,68	0/1:6,0:6:11.09:11,0,38
chr10	22787222	.	T	TG	15901.79	PASS	AB=1.000;AC=53;AF=0.946;AN=56;BaseQRankSum=-4.675;DP=554;FS=2.461;HRun=1;HaplotypeScore=105.4583;InbreedingCoeff=0.6206;MQ=75.61;MQ0=14;MQRankSum=-3.828;QD=30.23;ReadPosRankSum=5.937;VQSLOD=4.5582;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,15:15:27.09:427,27,0	1/1:0,8:8:15.05:234,15,0	0/1:31,0:24:17.91:18,0,460	0/0:28,0:17:25.20:0,25,310	1/1:2,26:28:51.09:782,51,0	1/1:2,15:16:39.13:623,39,0	1/1:1,22:22:30.10:479,30,0	1/1:1,22:23:66.14:966,66,0	1/1:0,20:20:51.17:811,51,0	1/1:1,17:18:48.13:714,48,0	1/1:0,18:18:36.12:572,36,0	1/1:0,18:18:45.15:718,45,0	1/1:1,15:15:27.09:431,27,0	1/1:0,10:10:27.09:431,27,0	1/1:0,29:29:60.20:958,60,0	1/1:1,28:27:54.18:861,54,0	1/1:3,11:13:33.11:500,33,0	1/1:3,10:13:18.74:363,19,0	1/1:0,14:14:42.14:669,42,0	1/1:1,12:14:17.92:285,18,0	1/1:1,29:30:51.14:811,51,0	1/1:0,21:20:45.15:719,45,0	1/1:2,17:18:30.10:480,30,0	1/1:0,29:29:36.12:575,36,0	1/1:1,23:24:48.16:767,48,0	1/1:0,28:27:78.27:1230,78,0	1/1:0,12:12:18.06:286,18,0	1/1:0,4:4:12.04:192,12,0
chr10	22787539	.	A	AG	12859.24	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-17.103;DP=676;FS=4.692;HRun=1;HaplotypeScore=59.8997;InbreedingCoeff=0.9956;MQ=94.40;MQ0=0;MQRankSum=-4.356;QD=41.22;ReadPosRankSum=2.042;VQSLOD=5.5396;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:84.25:0,84,1061	0/0:4,0:4:12.04:0,12,156	0/0:30,0:30:90.25:0,90,1122	0/0:31,0:31:78.68:0,79,968	0/0:28,0:28:81.25:0,81,1037	1/1:0,23:23:63.21:944,63,0	1/1:2,21:23:57.19:854,57,0	1/1:1,30:31:87.27:1263,87,0	0/0:23,0:23:66.21:0,66,857	0/0:26,0:26:78.25:0,78,1002	0/0:22,0:22:60.18:0,60,762	1/1:0,26:26:75.25:1124,75,0	1/1:1,25:26:66.22:989,66,0	1/1:0,23:23:69.23:1034,69,0	0/0:31,0:31:93.30:0,93,1207	0/0:31,0:31:90.29:0,90,1169	0/0:28,0:28:78.25:0,78,1013	0/0:22,0:22:63.20:0,63,818	0/0:20,0:20:60.19:0,60,779	0/0:26,0:26:75.24:0,75,973	0/0:13,0:13:39.13:0,39,506	1/1:1,22:23:63.21:941,63,0	1/1:0,28:28:84.28:1258,84,0	1/1:0,20:20:57.19:854,57,0	1/1:1,16:17:42.14:630,42,0	1/1:2,29:31:51.34:1265,51,0	1/1:0,28:28:81.27:1214,81,0	1/1:1,12:13:27.86:487,28,0
chr10	22789503	.	CA	C	949.11	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.933;DP=680;FS=3.420;HRun=4;HaplotypeScore=62.6196;InbreedingCoeff=0.9779;MQ=85.25;MQ0=0;MQRankSum=-2.348;QD=28.76;ReadPosRankSum=1.052;VQSLOD=3.4429;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,32:33:87.27:1044,87,0	0/0:10,0:10:30.07:0,30,399	0/0:23,0:23:59.97:0,60,783	0/0:20,0:20:13.55:0,14,566	0/0:35,0:35:99:0,105,1460	0/0:34,0:34:99:0,102,1429	0/0:31,0:31:90.27:0,90,1226	0/0:31,0:31:81.26:0,81,1105	0/0:18,0:18:54.18:0,54,756	0/0:34,0:34:99:0,99,1373	0/0:13,0:13:39.13:0,39,546	0/0:26,0:26:75.23:0,75,1019	0/0:35,0:35:99:0,99,1370	0/0:33,0:33:93.25:0,93,1263	0/0:27,0:27:81.27:0,81,1134	0/0:26,0:26:75.25:0,75,1039	0/0:19,0:19:51.17:0,51,714	0/0:20,0:20:60.20:0,60,838	0/0:16,0:16:45.13:0,45,600	0/0:19,0:19:54.18:0,54,756	0/0:20,0:20:54.18:0,54,756	0/0:24,0:24:60.20:0,60,840	0/0:27,0:27:78.25:0,78,1074	0/0:16,0:16:48.16:0,48,672	0/0:17,0:17:48.16:0,48,672	0/0:25,0:25:75.25:0,75,1051	0/0:35,0:35:99:0,105,1461	0/0:13,0:13:39.13:0,39,546
chr10	22789830	.	A	AT	3997.12	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-13.809;DP=628;FS=5.491;HRun=6;HaplotypeScore=55.5314;InbreedingCoeff=0.9988;MQ=77.31;MQ0=0;MQRankSum=-2.238;QD=32.50;ReadPosRankSum=0.546;VQSLOD=3.9456;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:51.11:0,51,520	1/1:0,8:8:24.08:302,24,0	0/0:13,0:13:26.40:0,26,243	0/0:13,0:13:30.90:0,31,289	0/0:40,0:40:99:0,105,1043	0/0:25,0:25:66.15:0,66,673	0/0:24,0:24:63.11:0,63,628	0/0:38,0:38:99:0,102,1026	1/1:2,15:17:42.13:528,42,0	0/0:22,0:22:63.13:0,63,633	0/0:23,0:23:63.14:0,63,643	0/0:29,0:29:78.13:0,78,780	0/0:26,0:26:75.15:0,75,757	0/0:23,0:23:69.15:0,69,703	0/0:19,0:19:57.13:0,57,581	0/0:21,0:21:54.10:0,54,544	1/1:0,24:24:63.20:792,63,0	1/1:1,16:17:42.13:526,42,0	1/1:2,13:15:39.12:489,39,0	1/1:2,26:28:78.25:981,78,0	1/1:1,13:14:30.10:377,30,0	0/0:29,0:29:84.17:0,84,845	0/0:28,0:28:78.16:0,78,789	0/0:15,0:15:39.09:0,39,398	0/0:27,0:27:69.13:0,69,691	0/0:32,0:32:87.17:0,87,873	0/0:32,0:31:84.17:0,84,850	0/0:8,0:8:24.05:0,24,245
chr10	22791855	.	A	ATG	25652.77	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-18.206;DP=767;FS=2.416;HRun=0;HaplotypeScore=80.2208;InbreedingCoeff=0.9992;MQ=89.01;MQ0=0;MQRankSum=-3.750;QD=49.43;ReadPosRankSum=2.845;VQSLOD=6.1822;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:93.24:0,93,1354	1/1:1,12:13:33.11:637,33,0	0/0:24,0:24:66.19:0,66,937	0/0:31,0:31:77.59:0,78,1071	0/0:26,0:26:75.24:0,75,1119	1/1:1,30:31:69.24:1333,69,0	1/1:0,22:22:54.19:1043,54,0	1/1:3,30:35:96.27:1686,96,0	1/1:0,29:29:84.29:1622,84,0	0/0:38,0:38:99:0,111,1675	0/0:28,0:28:81.26:0,81,1219	1/1:0,18:18:48.16:927,48,0	1/1:2,33:35:96.33:1853,96,0	1/1:0,30:30:75.26:1448,75,0	0/0:43,0:43:99:0,126,1926	0/0:26,0:26:78.25:0,78,1172	1/1:1,35:36:87.30:1680,87,0	1/1:4,12:16:36.12:694,36,0	1/1:4,15:19:51.17:975,51,0	1/1:2,28:31:84.29:1603,84,0	1/1:0,30:30:87.30:1680,87,0	1/1:2,25:28:72.25:1390,72,0	1/1:3,26:29:78.27:1501,78,0	1/1:1,17:18:39.13:753,39,0	1/1:2,27:30:72.25:1390,72,0	1/1:3,25:28:78.23:1409,78,0	1/1:1,32:34:84.29:1621,84,0	1/1:0,7:7:21.07:406,21,0
chr10	22792494	.	A	AGG	25732.99	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=-6.239;DP=666;FS=0.998;HRun=0;HaplotypeScore=78.4053;InbreedingCoeff=0.9942;MQ=78.60;MQ0=0;MQRankSum=-2.478;QD=55.34;ReadPosRankSum=1.738;VQSLOD=5.4132;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,30:31:87.30:1768,87,0	1/1:1,10:12:30.10:609,30,0	0/0:22,0:21:63.12:0,63,868	0/0:14,0:14:34.55:0,35,418	0/0:39,0:39:99:0,117,1883	1/1:2,23:25:72.25:1439,72,0	1/1:1,13:15:42.14:853,42,0	1/1:0,29:30:87.28:1711,87,0	1/1:0,20:21:57.20:1158,57,0	0/0:30,0:30:87.30:0,87,1418	0/0:30,0:30:90.31:0,90,1463	1/1:1,25:27:63.17:1239,63,0	1/1:0,28:28:81.28:1646,81,0	1/1:1,24:25:66.23:1341,66,0	0/0:37,0:37:99:0,111,1808	0/0:29,0:29:87.30:0,87,1417	1/1:0,19:20:54.19:1097,54,0	1/1:0,12:13:33.11:669,33,0	1/1:1,16:20:60.17:1112,60,0	1/1:1,31:32:90.31:1829,90,0	1/1:0,13:14:36.12:732,36,0	1/1:0,24:24:69.24:1402,69,0	1/1:1,22:24:63.22:1280,63,0	1/1:1,19:20:48.16:976,48,0	1/1:0,26:27:75.26:1524,75,0	1/1:2,21:23:66.23:1336,66,0	1/1:0,30:30:87.30:1765,87,0	1/1:0,4:4:12.04:244,12,0
chr10	22793493	.	C	CT	2451.63	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=-6.937;DP=367;FS=11.907;HRun=7;HaplotypeScore=36.8857;InbreedingCoeff=0.9154;MQ=90.64;MQ0=0;MQRankSum=-1.570;QD=24.04;ReadPosRankSum=1.922;VQSLOD=2.7537;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:51.08:0,51,493	1/1:0,8:8:24.07:290,24,0	0/0:15,0:16:32.91:0,33,290	0/1:17,0:18:6.85:7,0,194	0/0:15,0:15:39.06:0,39,376	0/0:19,0:19:51.08:0,51,492	0/0:11,0:11:27.04:0,27,260	0/0:23,0:23:57.08:0,57,546	1/1:2,9:11:27.08:326,27,0	0/0:12,0:12:33.05:0,33,319	0/0:7,0:7:21.03:0,21,203	0/0:9,0:9:27.04:0,27,260	0/0:14,0:14:42.07:0,42,405	0/0:8,0:8:24.04:0,24,232	0/0:13,0:13:36.06:0,36,348	0/0:9,0:9:24.04:0,24,232	1/1:0,16:16:42.13:507,42,0	1/1:1,6:7:15.05:180,15,0	1/1:2,20:22:63.19:759,63,0	1/1:2,11:13:33.10:399,33,0	1/1:2,5:7:15.05:181,15,0	0/0:11,0:11:30.03:0,30,284	0/0:11,0:11:33.05:0,33,319	0/0:14,0:14:39.06:0,39,376	0/0:17,0:17:51.08:0,51,492	0/0:11,0:11:30.04:0,30,290	0/0:13,0:12:39.06:0,39,377	0/0:12,0:12:33.05:0,33,319
chr10	22793697	.	TTA	T	913.15	PASS	AC=14;AF=0.259;AN=54;BaseQRankSum=6.632;DP=190;FS=1.773;HRun=0;HaplotypeScore=30.2825;InbreedingCoeff=0.6829;MQ=90.63;MQ0=1;MQRankSum=2.168;QD=27.67;ReadPosRankSum=0.617;VQSLOD=4.1240;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:4:9.03:0,9,152	1/1:0,4:4:8.92:116,9,0	0/0:10,0:5:2.90:0,3,26	0/0:31,0:19:1.48:0,1,50	0/0:2,0:2:6.02:0,6,101	0/0:13,0:13:36.12:0,36,603	0/0:3,0:3:9.03:0,9,152	0/0:36,0:36:87.30:0,87,1450	1/1:0,1:1:3.01:39,3,0	0/0:5,0:5:15.05:0,15,251	0/0:2,0:2:6.02:0,6,98	0/0:2,0:2:6.02:0,6,101	0/0:3,0:3:9.03:0,9,152	0/0:3,0:3:9.03:0,9,152	0/0:1,0:1:3.01:0,3,51	0/0:3,0:3:9.03:0,9,139	1/1:1,14:15:33.11:425,33,0	1/1:0,5:5:15.05:193,15,0	1/1:0,4:4:12.04:154,12,0	1/1:0,3:3:9.03:116,9,0	1/1:0,1:1:3.01:39,3,0	./.	0/0:3,0:3:9.03:0,9,147	0/0:3,0:3:9.03:0,9,152	0/0:7,0:7:21.07:0,21,354	0/0:9,0:9:24.08:0,24,405	0/0:7,0:7:18.06:0,18,290	0/0:9,0:9:21.07:0,21,349
chr10	22794431	.	G	GGTGT	3633.09	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=3.977;DP=542;FS=2.619;HRun=0;HaplotypeScore=126.8371;InbreedingCoeff=0.9289;MQ=67.70;MQ0=13;MQRankSum=-8.698;QD=38.24;ReadPosRankSum=0.469;VQSLOD=4.0874;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:15.02:0,15,206	1/1:3,1:4:9.03:221,9,0	0/0:36,0:20:54.13:0,54,878	0/0:42,0:19:41.97:0,42,703	0/0:21,0:21:35.73:0,36,792	0/0:18,0:18:6.01:0,6,77	0/0:17,0:17:19.60:0,20,700	0/0:21,0:21:54.60:0,55,873	1/1:8,5:13:29.64:586,30,0	0/0:14,0:14:33.01:0,33,489	0/0:19,0:19:36.97:0,37,599	0/0:15,0:15:39.13:0,39,685	0/0:20,0:20:8.41:0,8,69	0/0:25,0:25:57.16:0,57,958	0/0:29,0:29:71.58:0,72,1231	0/0:16,0:16:42.13:0,42,741	1/1:13,8:19:35.93:762,36,0	1/1:2,3:5:14.92:319,15,0	1/1:10,7:15:39.04:750,39,0	1/1:9,6:15:29.29:568,29,0	1/1:10,8:18:21.52:427,22,0	0/0:13,0:13:27.09:0,27,472	0/0:11,0:11:5.77:0,6,56	0/0:31,0:31:72.23:0,72,1197	0/0:19,0:19:45.12:0,45,767	0/0:25,0:25:66.21:0,66,1157	0/0:18,0:18:54.12:0,54,922	0/0:5,0:5:15.05:0,15,275
chr10	22794436	.	GCGTTT	G	2413.28	PASS	AB=0.908;AC=15;AF=0.268;AN=56;BaseQRankSum=8.032;DP=541;FS=4.013;HRun=0;HaplotypeScore=127.4043;InbreedingCoeff=0.5249;MQ=66.09;MQ0=16;MQRankSum=-6.099;QD=16.88;ReadPosRankSum=-0.264;VQSLOD=3.1010;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:1.11:0,1,98	1/1:3,0:3:9.03:139,9,0	0/0:36,0:20:54.14:0,54,1267	0/0:40,0:17:45.01:0,45,1052	0/0:23,0:23:48.23:0,48,1247	0/0:17,0:17:6:0,6,55	0/1:17,1:18:19.10:19,0,488	0/0:20,0:20:44:0,44,614	1/1:10,3:13:25.02:471,25,0	0/1:15,2:16:44.25:44,0,897	0/0:14,0:14:40.96:0,41,852	0/0:15,0:15:34.76:0,35,446	0/1:18,0:18:7.11:7,0,35	0/0:24,0:23:60.08:0,60,751	0/0:30,0:30:82.79:0,83,2085	0/0:16,0:16:44.50:0,45,1199	0/1:17,4:18:0.82:394,0,1	1/1:4,1:5:15.05:219,15,0	0/1:15,3:16:76.86:526,0,77	1/1:12,2:13:13.21:428,13,0	1/1:15,1:16:19.23:345,19,0	0/0:15,0:14:29.36:0,29,447	0/0:12,0:12:7.21:0,7,50	0/0:32,0:31:57.15:0,57,828	0/0:21,0:21:29.10:0,29,569	0/0:26,0:26:20.27:0,20,906	0/0:19,0:19:52.50:0,53,665	0/0:5,0:5:15.05:0,15,219
chr10	22794438	.	GTT	G	3841.09	PASS	AB=1.000;AC=33;AF=0.589;AN=56;BaseQRankSum=-3.879;DP=542;FS=19.992;HRun=4;HaplotypeScore=103.0651;InbreedingCoeff=0.4877;MQ=64.08;MQ0=17;MQRankSum=2.067;QD=11.30;ReadPosRankSum=1.870;VQSLOD=-0.2724;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:31,0:31:5.94:43,6,0	0/1:3,0:3:2.81:3,0,23	0/0:36,0:20:41.91:0,42,374	0/0:39,0:15:38.71:0,39,354	0/0:23,0:23:58.49:0,58,499	1/1:0,17:17:3.01:44,3,0	1/1:17,1:18:41.49:355,41,0	1/1:19,0:19:51.41:438,51,0	0/1:13,0:13:12.07:12,0,66	0/0:18,0:17:32.19:0,32,398	0/0:16,0:15:34.88:0,35,338	1/1:15,0:15:35.77:296,36,0	1/1:17,0:17:2.51:27,3,0	1/1:23,0:22:47.85:396,48,0	0/0:28,0:28:73.80:0,74,768	0/0:16,0:16:45.69:0,46,499	0/0:21,0:18:6.16:0,6,120	0/0:5,0:5:0.58:0,1,54	0/1:20,0:18:15.04:15,0,166	0/1:15,0:14:20.67:21,0,55	1/1:15,0:15:2.97:23,3,0	1/1:13,2:14:8.28:196,8,0	1/1:1,11:11:2.62:43,3,0	1/1:33,0:32:56.41:453,56,0	1/1:21,2:23:47.93:431,48,0	1/1:27,0:27:0.08:554,0,0	1/1:19,0:19:53.37:419,53,0	0/1:5,0:5:2.52:72,0,3
chr10	22794439	.	TTTTGTGTGTGTGTGTGTGTG	T	1592.70	PASS	AB=0.993;AC=14;AF=0.250;AN=56;BaseQRankSum=-6.454;DP=538;FS=18.516;HRun=0;HaplotypeScore=243.7873;InbreedingCoeff=-0.1891;MQ=62.28;MQ0=17;MQRankSum=0.930;QD=6.45;ReadPosRankSum=-2.340;VQSLOD=0.8048;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,30:31:6.02:319,6,0	0/1:3,0:3:3.10:3,0,23	0/0:34,0:18:41.94:0,42,442	0/0:39,0:15:38.80:0,39,470	0/0:21,0:22:58.59:0,59,2509	0/0:17,0:17:3.01:0,3,209	0/1:17,0:17:99:132,0,1148	0/1:19,0:19:99:319,0,168	0/0:13,0:13:18.39:0,18,369	0/0:17,0:17:43.23:0,43,2356	0/0:14,0:13:33.15:0,33,1504	0/1:15,0:16:84.17:84,0,1094	0/0:0,0:16:5.20:0,5,173	0/1:23,0:22:99:158,0,1326	0/0:28,0:28:72.75:0,73,3501	0/0:17,0:17:49.70:0,50,3221	0/0:22,0:19:41.06:0,41,865	0/0:5,0:5:14.53:0,15,201	0/0:18,0:17:9.21:0,9,472	0/0:16,0:15:13.83:0,14,511	0/1:15,0:15:15.24:15,0,57	0/1:15,0:14:41.01:41,0,1447	0/0:12,0:11:4.58:0,5,213	0/1:31,0:32:86.53:87,0,1642	0/1:22,0:22:99:126,0,1570	0/1:28,0:28:99:337,0,1425	0/1:20,0:20:99:116,0,1955	0/1:5,0:5:4.99:5,0,436
chr10	22794448	.	TGTG	T	240.36	PASS	AB=0.905;AC=12;AF=0.214;AN=56;BaseQRankSum=9.040;DP=623;FS=27.080;HRun=0;HaplotypeScore=135.5847;InbreedingCoeff=0.3602;MQ=52.06;MQ0=29;MQRankSum=-3.108;QD=1.65;ReadPosRankSum=0.275;VQSLOD=0.9642;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:33,0:32:2.18:19,2,0	1/1:5,0:4:6.45:22,6,0	0/0:27,0:11:30.08:0,30,362	0/0:38,0:14:38.21:0,38,438	0/0:25,0:25:51.68:0,52,828	0/0:20,0:20:14.95:0,15,262	0/0:20,0:20:45.57:0,46,613	0/0:20,0:19:53.58:0,54,628	1/1:13,2:14:0.30:77,0,0	0/0:22,0:20:57.65:0,58,990	0/0:14,0:13:26.96:0,27,424	0/0:23,0:23:51.28:0,51,594	0/0:17,0:16:0.92:0,1,4	0/0:29,0:28:63.18:0,63,819	0/0:32,0:32:81.12:0,81,1285	0/0:24,0:24:61.94:0,62,1028	0/1:22,4:21:68.10:114,0,68	0/1:8,1:7:20.32:39,0,20	0/1:18,0:15:6.20:6,0,176	0/1:17,2:17:48.41:92,0,48	1/1:19,0:17:2.59:10,3,0	0/0:21,0:20:35.60:0,36,592	0/0:14,0:13:6.37:0,6,64	0/0:36,0:34:58.63:0,59,677	0/0:25,0:25:56.10:0,56,710	0/0:34,0:34:81.72:0,82,1115	0/0:28,0:28:80.96:0,81,1028	0/0:8,0:8:21.07:0,21,340
chr10	22794662	.	AG	A	2800.28	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=13.443;DP=515;FS=3.781;HRun=6;HaplotypeScore=63.8810;InbreedingCoeff=0.9946;MQ=91.96;MQ0=0;MQRankSum=-1.246;QD=25.69;ReadPosRankSum=2.641;VQSLOD=4.0282;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:54.16:0,54,695	1/1:1,5:6:15.04:161,15,0	0/0:25,0:24:63.15:0,63,801	0/0:22,0:22:63.14:0,63,777	0/0:24,0:23:69.22:0,69,908	0/0:22,0:22:66.19:0,66,851	0/0:15,0:15:45.13:0,45,575	0/0:42,0:42:99:0,111,1459	1/1:2,19:21:57.14:613,57,0	0/0:17,0:17:48.16:0,48,630	0/0:12,0:12:33.11:0,33,433	0/0:13,0:13:36.12:0,36,473	0/0:20,0:20:51.17:0,51,671	0/0:25,0:25:60.20:0,60,789	0/0:14,0:14:42.14:0,42,552	0/0:14,0:14:33.11:0,33,434	1/1:1,19:20:51.13:548,51,0	1/1:1,7:8:18.04:193,18,0	1/1:2,15:17:45.11:483,45,0	1/1:3,21:23:57.14:613,57,0	1/1:1,12:13:36.09:387,36,0	0/0:11,0:11:30.10:0,30,394	0/0:12,0:12:33.11:0,33,434	0/0:13,0:13:36.10:0,36,457	0/0:31,0:31:84.15:0,84,1046	0/0:22,0:22:63.20:0,63,828	0/0:26,0:25:69.19:0,69,877	0/0:7,0:7:21.07:0,21,276
chr10	22794970	.	AACACACACAC	A	7140.50	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=6.326;DP=391;FS=2.733;HRun=0;HaplotypeScore=121.7820;InbreedingCoeff=0.8455;MQ=63.04;MQ0=6;MQRankSum=-6.929;QD=43.54;ReadPosRankSum=3.322;VQSLOD=4.7406;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:21:27.09:0,27,1182	0/0:4,0:4:3.01:0,3,132	0/0:26,0:12:6.02:0,6,176	0/0:30,0:13:9.03:0,9,313	0/0:17,0:24:36.11:0,36,1444	1/1:8,7:15:18.06:543,18,0	1/1:7,6:13:18.06:543,18,0	1/1:18,5:23:18.02:368,18,0	0/0:10,0:12:5.77:0,6,272	0/0:8,0:12:28.34:0,28,1108	0/0:5,0:9:9.03:0,9,413	1/1:6,3:9:12.04:362,12,0	1/1:6,9:16:24.08:672,24,0	1/1:4,10:15:36.12:1064,36,0	0/0:7,0:8:12.04:0,12,543	0/0:14,0:14:30.10:0,30,1293	0/0:11,0:14:21.07:0,21,705	0/0:10,0:13:9.92:0,10,338	0/0:16,0:17:27.09:0,27,1174	0/0:4,0:8:7.37:0,7,530	0/0:8,0:12:9.01:0,9,248	1/1:5,3:7:9.03:272,9,0	1/1:7,5:12:9.03:238,9,0	1/1:3,4:7:5.86:180,6,0	1/1:2,5:8:18.06:522,18,0	1/1:3,7:10:21.07:628,21,0	1/1:6,16:25:54.19:1567,54,0	1/1:1,2:3:6.02:181,6,0
chr10	22795328	.	ACTGT	A	1665.84	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=6.006;DP=182;FS=10.689;HRun=0;HaplotypeScore=45.0079;InbreedingCoeff=0.7302;MQ=85.13;MQ0=0;MQRankSum=-6.140;QD=34.70;ReadPosRankSum=-1.170;VQSLOD=2.1692;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:3,0:3:6.02:0,6,160	1/1:0,1:1:3.01:56,3,0	0/0:11,0:9:24.60:0,25,467	0/1:11,0:8:0.86:1,0,80	0/0:6,0:6:18.06:0,18,480	0/0:5,0:5:15.05:0,15,398	0/0:4,0:4:12.04:0,12,319	0/0:16,0:16:48.16:0,48,1266	1/1:0,6:7:17.95:331,18,0	0/0:7,0:7:21.07:0,21,560	0/0:6,0:6:18.06:0,18,480	0/0:5,0:5:15.05:0,15,400	0/0:14,0:14:42.14:0,42,1097	0/0:6,0:6:18.06:0,18,468	0/0:9,0:9:27.09:0,27,720	0/0:6,0:6:15.05:0,15,400	1/1:1,6:7:18.06:334,18,0	1/1:0,5:5:12.04:224,12,0	1/1:0,1:1:3.01:55,3,0	1/1:1,14:15:42.14:782,42,0	1/1:0,1:1:3.01:56,3,0	0/0:6,0:6:18.06:0,18,478	0/0:4,0:4:12.04:0,12,319	0/0:2,0:2:3.01:0,3,80	0/0:1,0:1:3.01:0,3,79	0/0:5,0:5:15.05:0,15,400	0/0:15,0:15:45.15:0,45,1188	0/0:3,0:3:9.03:0,9,240
chr10	22795627	.	TG	T	9037.37	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=14.470;DP=539;FS=14.205;HRun=2;HaplotypeScore=141.0664;InbreedingCoeff=0.9904;MQ=83.93;MQ0=0;MQRankSum=-11.590;QD=34.10;ReadPosRankSum=0.950;VQSLOD=2.8356;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:72.23:0,72,983	0/0:4,0:4:12.04:0,12,165	0/0:33,0:33:99:0,99,1411	0/0:12,0:10:21.06:0,21,294	0/0:19,0:19:57.17:0,57,802	1/1:4,21:25:63.20:816,63,0	1/1:1,15:16:42.13:537,42,0	1/1:4,21:25:66.14:808,66,0	0/0:16,0:16:48.13:0,48,625	0/0:21,0:21:63.21:0,63,943	0/0:13,0:13:39.13:0,39,583	1/1:1,21:22:60.18:760,60,0	1/1:0,21:21:63.20:812,63,0	1/1:2,25:27:78.17:975,78,0	0/0:22,0:22:66.22:0,66,989	0/0:19,0:19:57.18:0,57,833	0/0:13,0:13:36.12:0,36,505	0/0:17,0:17:48.63:0,49,672	0/0:18,0:18:48.14:0,48,640	0/0:11,0:11:24.55:0,25,332	0/0:31,0:31:93.31:0,93,1289	1/1:0,20:20:45.09:559,45,0	1/1:1,12:13:27.09:350,27,0	1/1:0,6:5:12.04:155,12,0	1/1:1,20:21:60.19:777,60,0	1/1:3,25:28:75.24:972,75,0	1/1:1,31:32:90.29:1166,90,0	1/1:0,9:9:27.09:350,27,0
chr10	22795661	.	TG	T	8031.32	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=10.621;DP=524;FS=5.760;HRun=4;HaplotypeScore=126.9771;InbreedingCoeff=0.9754;MQ=80.41;MQ0=0;MQRankSum=-9.468;QD=30.65;ReadPosRankSum=-1.700;VQSLOD=2.9514;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:74.74:0,75,1010	0/0:5,0:5:15.04:0,15,193	0/0:19,0:19:48.16:0,48,671	0/0:16,0:15:37.45:0,37,445	0/0:25,0:25:72.23:0,72,989	1/1:1,19:20:54.17:647,54,0	1/1:2,19:21:51.16:609,51,0	1/1:5,28:33:84.24:996,84,0	0/0:15,0:15:42.13:0,42,572	0/0:21,0:21:63.19:0,63,840	0/0:15,0:15:45.15:0,45,629	1/1:0,22:22:54.16:644,54,0	1/1:0,23:23:69.17:806,69,0	1/1:1,17:18:51.15:606,51,0	0/0:23,0:23:66.21:0,66,909	0/0:18,0:18:54.18:0,54,756	0/0:14,0:14:42.13:0,42,571	0/0:19,0:19:54.18:0,54,756	0/0:13,0:13:39.12:0,39,529	0/0:13,0:13:39.13:0,39,535	0/0:19,0:19:51.14:0,51,675	1/1:1,21:22:60.07:684,60,0	1/1:0,18:18:42.13:504,42,0	1/1:1,3:3:6.02:72,6,0	1/1:3,16:19:36.11:431,36,0	1/1:0,27:27:78.24:934,78,0	1/1:4,27:31:84.24:991,84,0	1/1:1,3:4:9.03:108,9,0
chr10	22797428	.	C	CA	755.49	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-3.305;DP=618;FS=25.282;HRun=8;HaplotypeScore=61.0100;InbreedingCoeff=0.8884;MQ=82.00;MQ0=0;MQRankSum=-0.127;QD=27.98;ReadPosRankSum=-0.562;VQSLOD=1.8429;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,26:27:75.18:850,75,0	0/0:7,0:7:21:0,21,188	0/0:18,0:18:42.89:0,43,381	0/0:16,0:16:5.94:0,6,189	0/0:37,0:37:90.01:0,90,817	0/0:23,0:23:63.03:0,63,577	0/0:20,0:21:60.03:0,60,548	0/0:34,0:34:81.03:0,81,741	0/0:24,0:24:66.03:0,66,604	0/0:24,0:24:69.03:0,69,631	0/0:24,0:24:66.03:0,66,604	0/0:15,0:15:39.02:0,39,357	0/0:19,0:19:45.02:0,45,412	0/0:24,0:24:51:0,51,467	0/0:25,0:25:72.04:0,72,659	0/0:24,0:24:66:0,66,594	0/0:26,0:26:72.02:0,72,653	0/0:25,0:25:72.04:0,72,659	0/0:17,0:17:42.02:0,42,384	0/0:25,0:25:69.03:0,69,631	0/0:18,1:19:19.41:0,19,432	0/0:20,0:20:57.03:0,57,521	0/0:21,0:21:57.03:0,57,521	0/0:7,0:7:18.01:0,18,165	0/0:27,0:27:69.01:0,69,631	0/0:33,0:33:87.04:0,87,796	0/0:27,0:27:69.02:0,69,627	0/0:9,0:9:27.01:0,27,247
chr10	22798216	.	T	TAC	78.21	PASS	AB=0.885;AC=3;AF=0.054;AN=56;BaseQRankSum=4.900;DP=597;FS=2.969;HRun=0;HaplotypeScore=145.2401;InbreedingCoeff=-0.0774;MQ=73.52;MQ0=0;MQRankSum=-3.327;QD=1.63;ReadPosRankSum=-2.374;VQSLOD=2.3690;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:19.84:0,20,319	0/1:9,4:13:55.53:56,0,123	0/0:23,0:14:14.53:0,15,133	0/0:38,0:21:22.42:0,22,159	0/0:17,0:17:42.13:0,42,621	0/0:25,0:25:66.22:0,66,1010	0/0:11,0:11:33.11:0,33,505	0/0:56,0:56:99:0,169,2438	0/0:17,4:21:2.09:0,2,192	0/0:25,0:25:75.24:0,75,1112	0/0:26,0:26:78.25:0,78,1171	0/0:15,0:15:45.13:0,45,645	0/0:30,0:30:87.28:0,87,1309	0/0:15,0:15:45.13:0,45,665	0/0:23,0:23:69.23:0,69,1055	0/0:18,0:18:54.18:0,54,825	0/0:11,5:16:1.82:0,2,44	0/1:18,1:18:20.92:21,0,467	0/1:15,1:16:99:101,0,298	0/0:25,18:43:30.04:0,30,438	0/0:6,2:8:9.01:0,9,116	0/0:13,0:13:36.12:0,36,551	0/0:24,0:24:66.19:0,66,966	0/0:5,0:5:15.05:0,15,229	0/0:25,0:25:75.22:0,75,1085	0/0:21,0:21:63.21:0,63,946	0/0:33,0:32:93.26:0,93,1353	0/0:4,0:4:12.04:0,12,183
chr10	22798220	.	CAT	C	1594.28	PASS	AB=0.667;AC=13;AF=0.232;AN=56;BaseQRankSum=7.959;DP=592;FS=1.208;HRun=0;HaplotypeScore=136.2610;InbreedingCoeff=0.8143;MQ=75.58;MQ0=0;MQRankSum=-3.913;QD=12.08;ReadPosRankSum=-1.197;VQSLOD=3.4294;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:20.66:0,21,325	1/1:4,7:11:9.03:122,9,0	0/0:24,0:15:15.05:0,15,111	0/0:34,0:23:2.93:0,3,77	0/0:16,0:16:45.15:0,45,773	0/0:26,0:26:69.22:0,69,1181	0/0:12,0:12:30.10:0,30,526	0/0:60,0:60:99:0,163,2733	1/1:4,18:22:5.66:191,6,0	0/0:25,0:25:75.25:0,75,1286	0/0:25,0:25:72.20:0,72,1164	0/0:11,0:11:33.10:0,33,546	0/0:29,0:29:72.21:0,72,1194	0/0:17,0:17:48.16:0,48,809	0/0:23,0:23:57.18:0,57,956	0/0:17,0:17:51.17:0,51,869	0/1:7,7:14:12.37:34,0,12	1/1:4,15:19:31.75:505,32,0	1/1:2,10:12:19.39:353,19,0	1/1:18,27:45:32.84:447,33,0	1/1:2,7:9:9.03:122,9,0	0/0:13,0:13:33.11:0,33,568	0/0:22,0:22:60.21:0,60,1041	0/0:5,0:5:15.05:0,15,256	0/0:25,0:25:69.24:0,69,1206	0/0:24,0:24:72.25:0,72,1253	0/0:33,0:32:99:0,99,1688	0/0:4,0:4:12.04:0,12,198
chr10	22802082	.	A	AG	28302.97	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-6.557;DP=756;FS=1.199;HRun=0;HaplotypeScore=85.2058;InbreedingCoeff=0.9988;MQ=84.74;MQ0=0;MQRankSum=-6.504;QD=44.36;ReadPosRankSum=3.540;VQSLOD=5.1685;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,47:47:99:2062,129,0	1/1:0,13:13:36.12:575,36,0	0/0:23,0:23:66.19:0,66,903	0/0:23,0:23:69.23:0,69,951	1/1:0,40:40:99:1870,117,0	1/1:0,21:21:57.19:911,57,0	1/1:0,22:22:66.23:1055,66,0	1/1:0,31:31:93.27:1416,93,0	1/1:0,30:30:87.30:1391,87,0	1/1:1,32:33:96.33:1535,96,0	1/1:0,20:20:54.18:863,54,0	1/1:1,33:34:99:1572,99,0	1/1:0,33:33:90.31:1439,90,0	1/1:0,32:32:81.28:1295,81,0	0/0:38,0:38:99:0,108,1491	0/0:34,0:34:96.32:0,96,1343	1/1:0,22:22:60.20:959,60,0	1/1:0,7:7:21.07:335,21,0	1/1:1,21:22:63.17:978,63,0	1/1:0,31:31:84.29:1342,84,0	1/1:1,29:30:69.24:1103,69,0	1/1:1,15:16:42.14:672,42,0	1/1:0,18:18:54.18:863,54,0	1/1:1,24:25:66.23:1055,66,0	1/1:1,31:32:93.32:1487,93,0	1/1:0,31:31:90.29:1414,90,0	1/1:1,28:29:75.26:1198,75,0	1/1:0,19:19:57.19:911,57,0
chr10	22802755	.	G	GC	4987.02	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-12.860;DP=651;FS=12.119;HRun=6;HaplotypeScore=61.4762;InbreedingCoeff=0.9809;MQ=67.94;MQ0=0;MQRankSum=-0.135;QD=31.97;ReadPosRankSum=1.870;VQSLOD=4.5370;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,107,1055	1/1:1,11:13:30.10:377,30,0	0/0:26,0:24:66.08:0,66,645	0/0:18,0:16:32.21:0,32,293	0/0:30,0:30:75.15:0,75,758	0/0:16,0:16:45.10:0,45,459	0/0:17,0:17:42.09:0,42,428	0/0:26,0:26:69.16:0,69,704	1/1:1,20:21:54.17:679,54,0	0/0:23,0:23:54.10:0,54,538	0/0:19,0:19:55.01:0,55,553	0/0:16,0:16:42.07:0,42,422	0/0:25,0:25:72.16:0,72,733	0/0:27,0:27:75.17:0,75,765	0/0:29,0:29:87.20:0,87,887	0/0:28,1:29:40.30:0,40,699	1/1:4,29:33:81.26:1019,81,0	1/1:2,29:31:78.25:981,78,0	1/1:1,21:22:66.17:799,66,0	1/1:0,17:17:51.07:603,51,0	1/1:2,17:19:42.13:528,42,0	0/0:19,0:19:45.09:0,45,453	0/0:20,0:20:57.05:0,57,568	0/0:20,0:20:51.07:0,51,505	0/0:21,0:21:57.12:0,57,576	0/0:27,0:27:72.14:0,72,723	0/0:42,0:41:99:0,120,1216	0/0:2,0:2:6.01:0,6,61
chr10	22803435	.	AT	A	15311.36	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=12.384;DP=661;FS=28.021;HRun=7;HaplotypeScore=125.9972;InbreedingCoeff=0.9987;MQ=81.51;MQ0=0;MQRankSum=-5.732;QD=27.54;ReadPosRankSum=4.587;VQSLOD=3.0340;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,42:43:99:1285,126,0	1/1:0,8:8:24.05:245,24,0	0/0:29,0:29:52.53:0,53,762	0/0:17,0:17:39.12:0,39,477	1/1:2,16:18:42.09:429,42,0	1/1:0,27:27:72.16:734,72,0	1/1:1,16:17:39.09:398,39,0	1/1:7,24:31:75.16:761,75,0	1/1:2,20:22:63.14:642,63,0	1/1:2,35:37:99:1060,105,0	1/1:0,15:15:42.10:428,42,0	1/1:0,33:33:99:1010,99,0	1/1:3,29:32:90.19:912,90,0	1/1:1,23:24:66.15:673,66,0	0/0:28,0:28:72.22:0,72,893	0/0:31,0:31:84.27:0,84,1057	1/1:3,21:24:63.14:643,63,0	1/1:0,8:8:24.05:245,24,0	1/1:3,18:18:45.10:459,45,0	1/1:1,15:16:45.10:459,45,0	1/1:2,33:35:90.20:918,90,0	1/1:2,18:20:48.10:490,48,0	1/1:1,11:12:33.07:337,33,0	1/1:1,26:27:78.17:796,78,0	1/1:4,14:18:42.09:429,42,0	1/1:0,19:19:57.13:582,57,0	1/1:0,31:31:93.21:949,93,0	1/1:4,14:18:42.09:428,42,0
chr10	22803720	.	A	AAT	7182.82	PASS	AB=1.000;AC=46;AF=0.885;AN=52;BaseQRankSum=0.022;DP=181;FS=0.000;HRun=0;HaplotypeScore=30.8689;InbreedingCoeff=0.3216;MQ=82.56;MQ0=0;MQRankSum=-0.498;QD=41.04;ReadPosRankSum=0.507;VQSLOD=5.7941;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,4:4:6.02:112,6,0	1/1:1,4:5:9.03:168,9,0	0/1:7,0:6:17.22:17,0,38	0/1:9,0:6:4.48:4,0,5	1/1:0,5:5:15.05:280,15,0	1/1:1,3:4:6.02:112,6,0	1/1:1,2:3:6.02:112,6,0	1/1:4,40:45:99:2229,129,0	1/1:0,1:1:3.01:56,3,0	1/1:0,7:7:21.07:383,21,0	1/1:0,1:1:3.01:56,3,0	1/1:0,3:3:6.02:112,6,0	1/1:0,3:3:6.02:112,6,0	1/1:0,3:3:9.03:169,9,0	0/0:5,0:5:12.04:0,12,175	0/0:1,0:1:3.01:0,3,44	1/1:1,20:21:42.14:784,42,0	1/1:0,9:9:24.08:438,24,0	1/1:0,7:8:24.04:383,24,0	./.	1/1:0,2:2:3.01:56,3,0	1/1:0,1:1:3.01:56,3,0	./.	1/1:0,2:2:6.02:112,6,0	1/1:0,8:8:24.08:449,24,0	1/1:0,6:6:18.05:306,18,0	1/1:0,7:7:18.06:337,18,0	1/1:1,10:11:18.06:337,18,0
chr10	22803970	.	AAT	A	2836.16	PASS	AB=1.000;AC=27;AF=0.500;AN=54;BaseQRankSum=-1.738;DP=213;FS=2.417;HRun=0;HaplotypeScore=42.3716;InbreedingCoeff=0.6962;MQ=75.74;MQ0=1;MQRankSum=4.600;QD=22.51;ReadPosRankSum=-1.058;VQSLOD=3.0189;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:39.13:0,39,644	0/0:0,0:4:6:0,6,53	0/0:8,0:4:5.83:0,6,61	0/1:19,0:10:10.99:11,0,25	0/0:10,0:10:30.10:0,30,499	1/1:1,8:9:21.07:265,21,0	1/1:1,1:2:3.01:38,3,0	1/1:10,37:47:64.44:1325,64,0	0/0:1,0:3:6:0,6,53	0/0:5,0:5:15.05:0,15,249	0/0:4,0:4:12.04:0,12,194	1/1:0,4:4:9.03:114,9,0	1/1:0,3:3:3.01:38,3,0	1/1:1,2:3:6.02:76,6,0	0/0:2,0:2:3.01:0,3,50	0/0:3,0:3:9.03:0,9,150	0/0:4,0:13:20.87:0,21,171	0/0:5,0:10:14.98:0,15,139	0/0:3,0:6:16.77:0,17,159	0/0:0,0:5:5.80:0,6,39	./.	1/1:0,1:1:3.01:38,3,0	1/1:0,2:2:6.02:76,6,0	1/1:0,3:3:9.03:114,9,0	1/1:0,11:11:30.10:379,30,0	1/1:1,6:7:17.99:181,18,0	1/1:1,7:8:21.07:265,21,0	1/1:4,3:7:9.03:114,9,0
chr10	22804181	.	C	CA	19957.96	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=10.439;DP=626;FS=0.393;HRun=1;HaplotypeScore=90.3293;InbreedingCoeff=0.9947;MQ=91.21;MQ0=0;MQRankSum=-8.387;QD=39.13;ReadPosRankSum=3.218;VQSLOD=5.3316;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,50:51:99:1798,120,0	1/1:0,8:8:24.08:360,24,0	0/0:28,0:28:84.22:0,84,1034	0/0:22,0:22:54.15:0,54,668	1/1:2,25:27:78.22:1138,78,0	1/1:0,27:27:66.22:989,66,0	1/1:2,21:23:57.15:829,57,0	1/1:1,34:35:99:1423,99,0	1/1:1,17:18:45.15:674,45,0	1/1:2,19:21:57.18:827,57,0	1/1:1,15:16:39.13:576,39,0	1/1:2,25:27:63.21:944,63,0	1/1:0,26:26:69.23:1033,69,0	1/1:2,28:30:78.26:1169,78,0	0/0:28,0:28:81.25:0,81,1037	0/0:38,0:38:99:0,114,1464	1/1:0,24:24:66.22:989,66,0	1/1:0,8:8:21.07:311,21,0	1/1:0,21:21:60.20:897,60,0	1/1:2,11:13:33.11:495,33,0	1/1:1,21:22:57.19:854,57,0	1/1:0,8:8:21.07:315,21,0	1/1:2,7:9:18.06:270,18,0	1/1:0,26:26:69.23:1034,69,0	1/1:0,15:15:39.13:584,39,0	1/1:0,24:24:72.22:1054,72,0	1/1:0,21:21:63.21:943,63,0	1/1:0,10:10:30.10:449,30,0
chr10	22805226	.	GT	G	4171.52	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=8.318;DP=702;FS=4.118;HRun=7;HaplotypeScore=86.7377;InbreedingCoeff=0.9941;MQ=83.81;MQ0=0;MQRankSum=-2.963;QD=25.44;ReadPosRankSum=0.126;VQSLOD=4.0163;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:75.21:0,75,918	1/1:0,6:6:12.03:122,12,0	0/0:23,0:23:54.12:0,54,615	0/0:28,0:27:75.05:0,75,865	0/0:32,0:33:87.11:0,87,1067	0/0:25,0:25:72.23:0,72,906	0/0:18,0:18:54.16:0,54,664	0/0:36,0:36:93.18:0,93,1059	1/1:0,20:20:60.14:612,60,0	0/0:29,0:29:84.26:0,84,1038	0/0:16,0:16:42.13:0,42,528	0/0:22,0:22:63.18:0,63,776	0/0:18,0:18:54.16:0,54,666	0/0:33,0:33:81.26:0,81,1015	0/0:29,0:29:84.22:0,84,1016	0/0:33,0:33:87.27:0,87,1081	1/1:3,27:30:72.16:734,72,0	1/1:3,12:15:30.07:306,30,0	1/1:2,26:28:75.11:741,75,0	1/1:3,37:40:99:1106,111,0	1/1:3,22:25:54.12:551,54,0	0/0:33,0:33:96.26:0,96,1189	0/0:38,0:38:99:0,111,1383	0/0:18,0:18:45.14:0,45,566	0/0:13,0:13:39.12:0,39,480	0/0:31,0:31:81.24:0,81,993	0/0:23,1:24:41.62:0,42,823	0/0:10,0:10:30.10:0,30,377
chr10	22805517	.	AT	A	1746.03	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=5.519;DP=529;FS=0.517;HRun=5;HaplotypeScore=59.1042;InbreedingCoeff=0.9670;MQ=76.18;MQ0=0;MQRankSum=-1.671;QD=28.16;ReadPosRankSum=-0.072;VQSLOD=3.6912;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:54.18:0,54,730	0/0:4,0:4:9.03:0,9,123	0/0:14,0:13:36.11:0,36,468	0/0:8,0:9:16.39:0,16,229	1/1:3,25:28:75:801,75,0	0/0:14,0:14:39.13:0,39,532	0/0:15,0:15:45.12:0,45,581	0/0:29,0:29:78.26:0,78,1066	0/0:11,0:11:30.10:0,30,410	1/1:1,20:21:60.17:680,60,0	1/1:1,12:13:36.10:408,36,0	0/0:12,0:12:36.11:0,36,471	0/0:21,0:21:60.20:0,60,820	0/0:18,0:18:54.15:0,54,706	0/0:30,0:30:81.24:0,81,1076	0/0:20,0:20:60.18:0,60,790	0/0:19,0:19:57.19:0,57,779	0/0:8,0:8:18.06:0,18,246	0/0:17,0:17:51.16:0,51,680	0/0:28,0:28:81.24:0,81,1074	0/0:23,0:23:63.21:0,63,861	0/0:16,0:16:45.15:0,45,614	0/0:31,0:31:84.27:0,84,1129	0/0:16,0:16:45.15:0,45,615	0/0:18,0:18:54.17:0,54,723	0/0:37,0:37:99:0,108,1449	0/0:34,0:34:90.29:0,90,1213	0/0:5,0:5:15.05:0,15,205
chr10	22806131	.	GT	G	4547.90	PASS	AC=14;AF=0.259;AN=54;BaseQRankSum=13.247;DP=642;FS=13.517;HRun=3;HaplotypeScore=131.5896;InbreedingCoeff=0.9970;MQ=82.18;MQ0=0;MQRankSum=-2.534;QD=32.72;ReadPosRankSum=3.565;VQSLOD=3.0296;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:66.21:0,66,931	1/1:2,14:16:42.13:521,42,0	0/0:23,0:23:39.67:0,40,704	0/0:17,0:17:25.04:0,25,585	0/0:30,0:30:90.29:0,90,1263	0/0:29,0:28:84.27:0,84,1190	0/0:18,0:18:51.14:0,51,682	0/0:39,0:39:99:0,111,1537	1/1:1,20:21:54.17:666,54,0	0/0:25,0:25:72.23:0,72,1018	0/0:25,0:25:69.23:0,69,984	0/0:19,0:19:57.12:0,57,796	0/0:29,0:29:87.28:0,87,1235	0/0:26,0:26:78.24:0,78,1087	0/0:25,0:25:75.25:0,75,1080	0/0:24,0:24:63.20:0,63,889	1/1:0,22:22:60.19:744,60,0	1/1:1,18:19:15.47:626,15,0	1/1:0,17:17:51.14:617,51,0	1/1:2,23:25:66.21:818,66,0	1/1:0,19:19:45.14:558,45,0	0/0:27,0:27:78.23:0,78,1070	0/0:24,0:24:69.23:0,69,993	0/0:17,0:17:51.17:0,51,734	0/0:23,0:23:66.19:0,66,900	0/0:26,0:26:78.25:0,78,1091	0/0:34,0:34:99:0,99,1419	./.
chr10	22806562	.	AACAC	A	718.31	PASS	AB=0.894;AC=21;AF=0.477;AN=44;BaseQRankSum=1.965;DP=491;FS=31.409;HRun=0;HaplotypeScore=96.1172;InbreedingCoeff=0.3520;MQ=56.57;MQ0=18;MQRankSum=0.064;QD=3.10;ReadPosRankSum=-0.892;VQSLOD=0.1763;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:26:18.04:0,18,315	1/1:7,2:12:6.01:74,6,0	./.	./.	1/1:17,0:20:7.56:61,8,0	0/1:19,0:19:17.03:39,0,17	0/0:15,0:16:17.80:0,18,333	./.	1/1:15,3:19:9.02:119,9,0	./.	1/1:15,2:18:9.02:119,9,0	1/1:12,0:15:4.77:34,5,0	./.	0/0:18,0:18:5.58:0,6,36	0/0:26,0:24:8.76:0,9,124	0/0:19,0:18:15.05:0,15,312	1/1:16,4:21:14.75:210,15,0	0/0:14,0:15:3:0,3,25	1/1:9,0:9:1.27:29,1,0	1/1:18,5:23:8.94:86,9,0	0/1:14,1:14:14.92:40,0,15	0/1:14,3:18:6.43:40,0,6	0/0:12,0:14:8.54:0,9,49	0/1:23,1:28:15.21:15,0,154	0/0:17,1:19:14.74:0,15,128	0/0:13,0:10:5.41:0,5,73	0/1:11,0:13:9.08:9,0,16	./.
chr10	22807233	.	GA	G	14471.86	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=6.987;DP=613;FS=4.622;HRun=7;HaplotypeScore=60.8587;InbreedingCoeff=0.9986;MQ=83.52;MQ0=0;MQRankSum=-4.944;QD=27.78;ReadPosRankSum=4.657;VQSLOD=5.4974;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,34:37:84.19:857,84,0	1/1:1,12:13:33.08:337,33,0	0/0:20,0:20:54.15:0,54,646	0/0:18,0:18:41.46:0,41,477	1/1:2,24:26:66.14:673,66,0	1/1:0,18:18:45.10:459,45,0	1/1:1,10:11:30.07:306,30,0	1/1:2,24:26:72.16:735,72,0	1/1:0,16:16:45.10:459,45,0	1/1:1,26:27:78.16:788,78,0	1/1:2,26:28:75.17:765,75,0	1/1:0,21:21:60.14:612,60,0	1/1:0,23:23:69.16:704,69,0	1/1:0,17:17:51.12:520,51,0	0/0:30,0:30:87.26:0,87,1070	0/0:24,0:24:72.22:0,72,893	1/1:1,17:18:48.11:490,48,0	1/1:1,17:18:48.02:476,48,0	1/1:2,14:16:42.05:413,42,0	1/1:0,26:26:78.18:796,78,0	1/1:1,16:17:39.09:398,39,0	1/1:2,19:21:57.13:582,57,0	1/1:2,22:24:66.15:673,66,0	1/1:1,18:19:51.12:520,51,0	1/1:1,31:32:93.21:949,93,0	1/1:2,23:25:69.15:704,69,0	1/1:1,34:35:99:1041,102,0	1/1:0,7:7:21.05:214,21,0
chr10	22808577	.	T	TACAC	5275.29	PASS	AB=0.767;AC=47;AF=0.870;AN=54;BaseQRankSum=3.452;DP=519;FS=3.008;HRun=0;HaplotypeScore=154.5964;InbreedingCoeff=0.4694;MQ=64.90;MQ0=5;MQRankSum=-1.107;QD=12.04;ReadPosRankSum=-1.923;VQSLOD=4.4457;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:16,5:23:36.74:139,0,37	1/1:4,3:8:9.03:215,9,0	./.	0/0:27,0:19:6.02:0,6,95	1/1:17,0:19:3.01:52,3,0	1/1:28,0:28:7.87:95,8,0	1/1:20,0:20:3.48:52,3,0	1/1:35,0:35:41.81:467,42,0	1/1:3,7:14:18.06:430,18,0	1/1:16,0:16:27.08:401,27,0	1/1:12,0:14:3.01:31,3,0	1/1:15,0:14:6.48:74,6,0	1/1:22,0:21:17.94:246,18,0	1/1:16,0:16:3.01:49,3,0	0/0:16,0:16:27.06:0,27,382	0/0:14,0:13:33.06:0,33,433	1/1:8,9:20:24.08:545,24,0	1/1:12,7:20:15.05:342,15,0	1/1:9,5:15:21.01:348,21,0	1/1:7,5:16:14.79:279,15,0	1/1:9,8:18:21.07:462,21,0	1/1:16,0:15:3.01:51,3,0	1/1:18,0:17:2.29:24,2,0	1/1:14,0:14:5.97:53,6,0	1/1:20,0:20:12.02:173,12,0	1/1:21,0:21:31.37:432,31,0	1/1:18,0:18:12.10:204,12,0	1/1:9,0:9:6.02:111,6,0
chr10	22808591	.	C	CCCACACACACACACACACACAT	9213.37	PASS	AB=0.974;AC=20;AF=0.357;AN=56;BaseQRankSum=1.405;DP=562;FS=8.794;HRun=0;HaplotypeScore=310.8313;InbreedingCoeff=-0.2725;MQ=49.97;MQ0=9;MQRankSum=-5.415;QD=25.24;ReadPosRankSum=1.368;VQSLOD=2.0557;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:8.96:0,9,563	0/0:8,0:8:18.02:0,18,326	0/0:21,0:10:30.05:0,30,311	0/0:29,0:19:33.63:0,34,515	0/1:23,0:23:85.98:86,0,91	0/1:30,0:29:92.78:515,0,93	0/1:22,0:22:73.10:318,0,73	0/1:35,0:35:99:1884,0,102	0/0:13,0:13:23.71:0,24,563	0/1:15,0:15:16.13:774,0,16	0/1:14,0:14:80.80:191,0,81	0/1:18,0:17:46.48:314,0,46	0/1:20,0:19:99:726,0,113	1/1:15,0:15:8.04:263,8,0	0/0:19,0:19:7.54:0,8,1534	0/0:16,0:15:45.09:0,45,1574	0/0:23,0:23:10.22:0,10,694	0/1:19,0:19:4.04:4,0,539	0/1:19,0:17:7.20:7,0,371	0/0:22,0:21:35.87:0,36,602	0/0:20,0:20:23.12:0,23,585	0/1:7,1:24:83.81:274,0,84	1/1:21,0:20:6.42:51,6,0	0/1:17,0:17:64.57:121,0,65	0/1:21,0:21:24.07:734,0,24	0/1:23,0:23:42.49:1913,0,42	0/1:18,0:18:55.68:787,0,56	0/1:10,0:10:90.79:251,0,91
chr10	22809336	.	A	ATG	2886.97	PASS	AC=16;AF=0.296;AN=54;BaseQRankSum=-6.524;DP=485;FS=7.504;HRun=0;HaplotypeScore=106.0130;InbreedingCoeff=0.8651;MQ=67.67;MQ0=8;MQRankSum=-0.039;QD=20.19;ReadPosRankSum=2.039;VQSLOD=3.5609;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,13:23:36.12:582,36,0	1/1:4,7:11:0.59:181,1,0	0/0:41,0:28:42.13:0,42,512	0/0:34,0:19:28.87:0,29,329	0/0:30,0:29:32.97:0,33,376	0/0:16,0:18:19.84:0,20,100	0/0:16,0:19:11.01:0,11,55	0/0:4,0:11:10.24:0,10,84	1/1:8,7:15:18.06:291,18,0	0/0:26,0:25:42.19:0,42,681	0/0:12,0:12:5.53:0,6,73	0/0:8,0:13:17.24:0,17,89	0/0:9,0:9:2.20:0,2,63	0/0:8,0:13:16.17:0,16,83	0/0:12,0:12:18.06:0,18,221	0/0:14,0:15:23.18:0,23,336	1/1:7,12:19:24.08:391,24,0	1/1:4,6:10:18.53:294,19,0	1/1:9,9:18:27.07:410,27,0	1/1:9,15:24:21.07:342,21,0	1/1:3,19:23:36.12:587,36,0	0/0:13,0:18:16.98:0,17,86	0/0:7,0:8:11.49:0,11,62	0/0:5,0:12:22.79:0,23,113	0/0:13,0:15:10.81:0,11,55	0/0:10,0:16:25.38:0,25,127	0/0:9,0:12:14.06:0,14,68	./.
chr10	22809355	.	C	CGT	2598.46	PASS	AB=0.821;AC=27;AF=0.482;AN=56;BaseQRankSum=-3.753;DP=467;FS=0.626;HRun=0;HaplotypeScore=92.2272;InbreedingCoeff=0.4058;MQ=43.80;MQ0=33;MQRankSum=-2.502;QD=11.92;ReadPosRankSum=0.055;VQSLOD=3.4096;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:16:17.44:0,17,189	0/0:8,0:8:11.85:0,12,124	0/0:67,0:20:15.40:0,15,160	0/0:66,0:16:6.88:0,7,73	1/1:9,12:20:12.04:170,12,0	1/1:12,4:16:23.73:291,24,0	0/1:14,0:14:30.29:30,0,65	1/1:11,2:12:14.96:166,15,0	0/0:9,0:9:14.96:0,15,138	0/1:5,20:22:10.62:855,0,11	1/1:3,4:7:3.01:49,3,0	1/1:9,5:12:12.46:131,12,0	1/1:7,2:7:9.03:106,9,0	1/1:8,5:13:15:144,15,0	0/0:12,0:12:8.87:0,9,59	0/0:13,0:13:20.82:0,21,257	0/0:11,0:11:19.50:0,19,205	0/0:7,0:7:14.99:0,15,161	0/1:15,1:14:20.07:20,0,200	0/0:17,0:16:18.04:0,18,199	0/0:22,0:22:27.08:0,27,326	0/1:13,0:11:27.88:63,0,28	1/1:7,3:9:12.04:155,12,0	0/1:9,2:11:61.80:82,0,62	1/1:10,3:11:5.38:56,5,0	1/1:10,3:13:18.06:272,18,0	0/1:4,1:5:24.47:118,0,24	0/1:1,3:4:17.73:88,0,18
chr10	22810988	.	CCTCTCTCTCTCTCTCTCTCTCTCTCTCT	C	6540.51	PASS	AB=0.875;AC=21;AF=0.375;AN=56;BaseQRankSum=8.808;DP=446;FS=22.470;HRun=0;HaplotypeScore=255.2694;InbreedingCoeff=0.8338;MQ=64.02;MQ0=16;MQRankSum=-4.120;QD=39.40;ReadPosRankSum=0.087;VQSLOD=2.0524;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:5,18:22:15.05:1075,15,0	1/1:2,2:4:6.02:280,6,0	0/0:24,0:13:9.03:0,9,167	0/0:20,0:14:18.03:0,18,453	1/1:4,15:18:21.07:622,21,0	0/0:16,0:15:21.07:0,21,870	0/0:12,0:16:27.56:0,28,1234	0/0:29,0:29:36.12:0,36,1220	1/1:3,8:11:12.04:872,12,0	1/1:6,7:12:15.04:746,15,0	1/1:6,9:13:9.03:488,9,0	0/0:12,0:15:21.96:0,22,1238	0/0:4,0:13:24.08:0,24,1365	0/0:8,0:12:18.05:0,18,698	0/0:25,0:24:48.03:0,48,3888	0/0:18,0:20:36.12:0,36,3228	1/1:10,10:18:6.02:374,6,0	0/1:6,1:6:99:357,0,245	1/1:10,8:17:27.04:828,27,0	1/1:6,11:17:9.03:653,9,0	1/1:19,0:17:12:246,12,0	0/0:10,0:10:18.06:0,18,828	0/0:9,0:9:9.03:0,9,206	0/0:10,0:19:37.01:0,37,3049	0/0:11,0:14:36.12:0,36,1998	0/0:12,0:15:27.09:0,27,1758	0/0:10,0:14:30.10:0,30,1804	0/0:7,0:7:12.04:0,12,291
chr10	22811005	.	CT	C	548.04	PASS	AB=0.750;AC=21;AF=0.375;AN=56;BaseQRankSum=9.858;DP=440;FS=0.636;HRun=1;HaplotypeScore=81.1474;InbreedingCoeff=0.8064;MQ=51.16;MQ0=23;MQRankSum=-5.739;QD=4.64;ReadPosRankSum=5.720;VQSLOD=0.5331;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:18:11.49:66,11,0	1/1:3,0:3:4.44:14,4,0	0/0:17,0:5:12.04:0,12,152	0/0:26,0:10:20.04:0,20,215	1/1:16,0:15:5.70:42,6,0	0/0:15,0:14:36.12:0,36,454	0/0:21,0:21:43.82:0,44,527	0/0:21,0:21:60.18:0,60,749	1/1:8,0:8:9.49:31,9,0	1/1:7,1:7:13.12:89,13,0	1/1:9,2:9:5.05:40,5,0	0/0:23,0:23:38.30:0,38,459	0/0:15,0:15:21.54:0,22,237	0/0:16,0:16:37.35:0,37,443	0/0:29,0:28:65.99:0,66,902	0/0:21,0:20:50.19:0,50,675	1/1:13,0:11:5.38:48,5,0	0/1:4,2:5:34.72:79,0,35	1/1:11,0:10:18.58:163,19,0	1/1:12,0:12:6.96:22,7,0	1/1:2,9:8:12.04:154,12,0	0/0:13,0:13:24.96:0,25,306	0/0:14,0:14:27.09:0,27,342	0/0:29,0:28:48.57:0,49,496	0/0:17,0:16:43.38:0,43,536	0/0:16,0:16:46.14:0,46,526	0/0:19,0:18:32.50:0,33,386	0/0:10,0:10:27.09:0,27,341
chr10	22811354	.	ACTC	A	5242.15	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=17.316;DP=692;FS=5.922;HRun=0;HaplotypeScore=170.6392;InbreedingCoeff=0.9389;MQ=86.44;MQ0=0;MQRankSum=-0.796;QD=17.13;ReadPosRankSum=3.974;VQSLOD=4.4277;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,135,3021	0/0:10,0:10:30.10:0,30,680	0/0:26,0:26:8.21:0,8,1138	0/0:26,0:26:65.95:0,66,1365	0/0:29,0:29:69.24:0,69,1561	1/1:18,0:18:36.06:325,36,0	1/1:23,0:23:31.52:338,32,0	1/1:16,6:22:40.65:363,41,0	0/0:19,0:19:57.20:0,57,1269	0/0:26,0:26:75.22:0,75,1612	0/0:17,0:17:48.16:0,48,1034	1/1:32,1:33:40.03:644,40,0	1/1:30,2:32:45.41:527,45,0	1/1:35,0:35:32.63:491,33,0	0/0:41,0:41:99:0,117,2590	0/0:24,0:24:69.24:0,69,1564	0/0:19,0:19:57.20:0,57,1292	0/0:22,0:22:66.21:0,66,1415	0/0:25,0:25:72.25:0,72,1622	0/0:30,0:30:87.30:0,87,1941	0/0:22,0:22:60.21:0,60,1360	1/1:22,0:22:36.53:317,37,0	1/1:26,0:26:37.69:358,38,0	1/1:23,2:25:53.88:564,54,0	1/1:12,0:12:16.83:223,17,0	1/1:28,1:29:0.24:607,0,0	1/1:26,1:27:50.08:447,50,0	1/1:2,0:2:5.83:37,6,0
chr10	22812115	.	TC	T	2885.58	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.872;DP=542;FS=3.387;HRun=1;HaplotypeScore=57.1991;InbreedingCoeff=0.9956;MQ=68.32;MQ0=2;MQRankSum=1.496;QD=37.48;ReadPosRankSum=2.579;VQSLOD=4.2777;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:87.26:0,87,1248	0/0:6,0:6:18.05:0,18,249	0/0:18,0:14:24.45:0,24,408	0/0:17,1:14:26.61:0,27,297	1/1:0,31:31:87.20:1171,87,0	0/0:23,0:23:66.18:0,66,959	0/0:14,0:14:42.09:0,42,565	0/0:28,0:28:84.21:0,84,1164	0/0:16,0:16:48.16:0,48,716	1/1:0,23:23:69.20:916,69,0	1/1:0,23:23:69.19:942,69,0	0/0:18,0:18:54.15:0,54,764	0/0:21,0:21:63.15:0,63,916	0/0:18,0:18:54.17:0,54,787	0/0:17,0:17:51.16:0,51,743	0/0:12,0:12:36.11:0,36,518	0/0:19,0:19:57.17:0,57,830	0/0:22,0:22:57.16:0,57,829	0/0:21,0:21:63.19:0,63,906	0/0:24,0:24:71.26:0,71,1015	0/0:15,0:15:45.13:0,45,644	0/0:9,0:9:27.09:0,27,402	0/0:16,0:16:48.14:0,48,677	0/0:18,0:18:54.17:0,54,785	0/0:24,0:23:72.20:0,72,997	0/0:14,0:14:42.10:0,42,586	0/0:26,0:26:78.23:0,78,1123	0/0:17,0:17:51.07:0,51,666
chr10	22813166	.	TTA	T	22967.34	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=13.160;DP=667;FS=1.261;HRun=0;HaplotypeScore=157.8510;InbreedingCoeff=0.9992;MQ=87.46;MQ0=0;MQRankSum=-10.060;QD=41.01;ReadPosRankSum=4.325;VQSLOD=6.0016;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,21:21:43.41:686,43,0	1/1:0,12:12:30.10:459,30,0	0/0:27,0:27:78.26:0,78,1337	0/0:24,0:24:72.20:0,72,1285	1/1:2,26:28:78.26:1193,78,0	1/1:0,31:31:93.32:1423,93,0	1/1:0,31:31:84.29:1285,84,0	1/1:0,33:33:99:1429,99,0	1/1:2,23:25:69.23:1055,69,0	1/1:1,36:37:99:1628,108,0	1/1:1,18:19:54.18:825,54,0	1/1:2,13:15:36.12:549,36,0	1/1:1,31:32:81.28:1238,81,0	1/1:1,25:26:75.25:1147,75,0	0/0:24,0:24:72.25:0,72,1388	0/0:31,1:32:50.38:0,50,1707	1/1:1,17:18:51.17:780,51,0	1/1:1,15:16:42.14:643,42,0	1/1:0,22:22:63.19:940,63,0	1/1:0,25:25:72.20:1067,72,0	1/1:0,16:16:42.14:643,42,0	1/1:1,16:17:45.15:689,45,0	1/1:1,28:29:72.12:1094,72,0	1/1:0,19:19:39.13:596,39,0	1/1:1,19:20:48.04:733,48,0	1/1:1,31:32:93.31:1395,93,0	1/1:0,27:27:72.11:1102,72,0	1/1:0,9:9:24.08:367,24,0
chr10	22814916	.	T	TTTTG	10206.54	PASS	AB=0.964;AC=21;AF=0.375;AN=56;BaseQRankSum=15.002;DP=671;FS=22.448;HRun=0;HaplotypeScore=120.5870;InbreedingCoeff=0.9228;MQ=70.29;MQ0=0;MQRankSum=-4.625;QD=38.23;ReadPosRankSum=0.636;VQSLOD=3.1865;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:85.70:0,86,1521	1/1:0,10:10:27.09:647,27,0	0/0:25,0:25:71.01:0,71,1151	0/0:15,0:15:39.11:0,39,636	1/1:13,21:37:60.05:1255,60,0	0/0:23,0:23:63.18:0,63,1062	0/0:32,0:32:84.22:0,84,1383	0/0:21,0:21:54.17:0,54,929	1/1:4,20:25:33.11:797,33,0	1/1:17,14:32:40.53:1135,41,0	1/1:4,17:21:48.64:1141,49,0	0/0:20,0:20:60.21:0,60,1085	0/0:20,0:20:48.16:0,48,871	0/0:20,0:20:60.21:0,60,1080	0/0:33,0:33:90.30:0,90,1590	0/0:30,0:30:81.26:0,81,1432	1/1:5,23:28:61.15:1438,61,0	1/1:6,7:14:23.94:473,24,0	1/1:8,7:15:21.93:535,22,0	1/1:7,28:37:81.24:1847,81,0	1/1:6,14:21:36.12:869,36,0	0/0:21,0:21:60.18:0,60,1018	0/0:37,0:37:99:0,108,1911	0/0:20,0:20:57.15:0,57,990	0/0:14,0:14:39.13:0,39,711	0/1:26,1:27:69.63:70,0,1138	0/0:22,0:22:60.21:0,60,1102	0/0:19,0:19:57.14:0,57,950
chr10	22816132	.	A	AT	2992.05	PASS	AB=0.848;AC=25;AF=0.446;AN=56;BaseQRankSum=-6.768;DP=482;FS=9.545;HRun=12;HaplotypeScore=62.6573;InbreedingCoeff=0.8364;MQ=67.01;MQ0=1;MQRankSum=2.059;QD=12.90;ReadPosRankSum=-1.119;VQSLOD=2.7155;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:3,0:20:20.03:0,20,72	0/0:9,0:9:20.84:0,21,153	0/1:16,0:6:1.17:1,0,2	0/1:8,0:6:2.42:35,0,2	0/0:3,0:28:47.04:0,47,147	1/1:3,13:16:35.65:349,36,0	1/1:3,11:15:32.81:292,33,0	1/1:16,17:33:48.02:447,48,0	0/0:11,0:11:20.87:0,21,153	0/0:6,0:18:22.71:0,23,66	0/0:1,0:12:20.41:0,20,63	1/1:10,10:20:13.99:293,14,0	0/0:14,0:14:29.81:0,30,219	1/1:1,16:17:39.06:379,39,0	0/0:16,0:16:41.72:0,42,303	0/0:20,0:20:50.70:0,51,372	0/0:25,0:25:71.56:0,72,523	0/0:9,0:8:11.01:0,11,141	0/0:24,1:26:5.59:0,6,195	0/0:26,0:29:59.50:0,60,408	0/0:13,0:13:26.81:0,27,195	0/1:2,10:12:0.87:154,0,1	1/1:5,1:22:37.39:189,37,0	1/1:5,1:14:14.24:72,14,0	1/1:5,14:19:38.55:357,39,0	1/1:6,14:20:12.61:269,13,0	1/1:1,15:17:33.57:308,34,0	1/1:0,3:3:6.01:58,6,0
chr10	22816288	.	A	AT	16199.47	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-9.991;DP=571;FS=0.000;HRun=6;HaplotypeScore=46.9279;InbreedingCoeff=0.9740;MQ=72.99;MQ0=0;MQRankSum=-3.730;QD=31.64;ReadPosRankSum=2.785;VQSLOD=5.0487;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,32:35:87.28:1094,87,0	1/1:0,3:3:9.03:113,9,0	0/0:7,0:7:21.03:0,21,207	0/0:12,0:12:28.28:0,28,257	1/1:2,32:34:87.28:1087,87,0	1/1:2,20:22:42.13:528,42,0	1/1:0,12:12:30.10:377,30,0	1/1:1,23:24:63.18:776,63,0	1/1:3,25:28:72.23:906,72,0	1/1:3,18:21:48.15:604,48,0	1/1:4,22:26:63.16:775,63,0	1/1:0,14:14:36.11:450,36,0	1/1:1,15:17:39.12:483,39,0	1/1:1,19:20:51.16:642,51,0	0/0:23,0:23:66.15:0,66,673	0/0:17,0:17:51.12:0,51,520	1/1:4,26:30:72.23:906,72,0	1/1:0,5:5:12.04:151,12,0	1/1:2,13:15:39.09:464,39,0	1/1:5,30:35:93.25:1144,93,0	1/1:2,16:18:48.15:604,48,0	1/1:4,28:32:78.25:981,78,0	1/1:2,24:26:60.19:755,60,0	1/1:0,16:16:45.14:566,45,0	1/1:1,29:30:84.27:1057,84,0	1/1:1,17:18:51.16:642,51,0	1/1:2,15:17:45.14:566,45,0	1/1:0,14:14:42.13:528,42,0
chr10	22820499	.	T	TG	4800.21	PASS	AB=0.994;AC=36;AF=0.643;AN=56;BaseQRankSum=15.361;DP=581;FS=35.185;HRun=1;HaplotypeScore=84.6400;InbreedingCoeff=0.5254;MQ=59.42;MQ0=3;MQRankSum=0.150;QD=11.43;ReadPosRankSum=4.329;VQSLOD=1.3205;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:22:76.34:154,0,76	0/1:13,0:13:15.86:117,0,16	0/0:24,0:20:53.97:0,54,657	0/0:15,1:12:36:0,36,399	0/0:33,0:33:99:0,99,1232	1/1:14,0:14:13.62:170,14,0	1/1:15,0:15:8.27:127,8,0	0/1:26,1:26:34.10:346,0,34	1/1:17,0:17:22.30:207,22,0	0/0:26,0:26:78.25:0,78,1013	0/0:19,0:19:57.19:0,57,740	1/1:9,0:9:25.48:126,25,0	0/1:17,0:17:10.10:152,0,10	1/1:22,0:22:57.51:305,58,0	0/0:18,0:18:54.14:0,54,670	0/0:24,0:24:72.22:0,72,920	1/1:31,2:33:42.81:443,43,0	1/1:24,0:24:42.18:317,42,0	1/1:17,0:15:15.17:154,15,0	1/1:23,0:23:14.26:257,14,0	1/1:21,0:21:48.73:255,49,0	1/1:17,0:17:18.32:197,18,0	1/1:24,0:24:36.86:307,37,0	1/1:22,0:22:58:323,58,0	1/1:19,0:19:19.31:205,19,0	0/1:25,0:25:14.45:229,0,14	0/1:21,0:21:22.28:161,0,22	1/1:17,1:17:38.04:249,38,0
chr10	22820500	.	G	GT	13858.80	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=-11.952;DP=592;FS=36.706;HRun=4;HaplotypeScore=55.1009;InbreedingCoeff=0.9973;MQ=59.47;MQ0=3;MQRankSum=0.607;QD=32.38;ReadPosRankSum=1.310;VQSLOD=2.3958;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,16:22:16.47:462,16,0	1/1:2,11:13:30.10:410,30,0	0/0:26,0:21:57.15:0,57,636	0/0:16,0:12:27.07:0,27,299	0/0:33,0:33:93.26:0,93,1048	1/1:1,13:14:39.13:534,39,0	1/1:1,14:15:33.07:430,33,0	1/1:5,22:26:66.18:866,66,0	1/1:1,16:17:45.15:616,45,0	0/0:26,0:26:78.22:0,78,885	0/0:19,0:19:57.16:0,57,647	1/1:2,9:11:27.09:369,27,0	1/1:2,14:16:39.13:534,39,0	1/1:0,22:22:60.20:821,60,0	0/0:18,0:18:51.14:0,51,575	0/0:26,0:26:69.19:0,69,782	1/1:6,28:34:81.73:1096,82,0	1/1:2,23:25:60.20:820,60,0	1/1:2,16:16:42.12:546,42,0	1/1:2,23:25:60.17:800,60,0	1/1:0,22:22:51.17:698,51,0	1/1:1,17:18:45.15:616,45,0	1/1:1,23:24:63.21:860,63,0	1/1:0,22:22:60.20:821,60,0	1/1:1,18:19:45.15:616,45,0	1/1:1,24:25:35.18:853,35,0	1/1:5,16:21:42.14:575,42,0	1/1:1,17:17:39.12:517,39,0
chr10	22821097	.	AT	A	11980.76	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=-2.918;DP=629;FS=3.521;HRun=7;HaplotypeScore=111.0134;InbreedingCoeff=0.9867;MQ=70.10;MQ0=0;MQRankSum=-3.913;QD=26.51;ReadPosRankSum=1.502;VQSLOD=4.5654;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,35:35:90.16:906,90,0	1/1:1,6:7:18.04:184,18,0	0/0:18,0:15:29.87:0,30,305	0/0:18,0:16:21.24:0,21,246	0/0:3,0:31:82.57:0,83,427	1/1:1,26:27:69.16:704,69,0	1/1:4,13:17:33.05:328,33,0	1/1:2,26:28:78.18:795,78,0	1/1:0,27:27:78.18:796,78,0	0/0:4,0:32:88.63:0,89,456	0/0:2,0:29:74.30:0,74,379	1/1:2,16:18:48.11:490,48,0	1/1:0,21:21:60.06:592,60,0	1/1:1,17:18:48.11:488,48,0	0/0:22,0:22:66.21:0,66,829	0/0:25,0:25:75.21:0,75,917	1/1:1,29:30:81.18:826,81,0	1/1:6,24:30:47.87:624,48,0	1/1:1,12:13:30.06:306,30,0	1/1:1,32:33:93.14:935,93,0	1/1:0,18:18:48.11:490,48,0	1/1:0,22:22:60.13:612,60,0	1/1:0,19:19:57.13:581,57,0	1/1:2,8:10:24.05:244,24,0	1/1:0,21:21:57.13:582,57,0	1/1:4,17:21:48.10:490,48,0	1/1:3,31:34:90.19:918,90,0	1/1:0,3:3:9.02:92,9,0
chr10	22821758	.	T	TCTGTGATC	10921.87	PASS	AB=0.783;AC=41;AF=0.732;AN=56;BaseQRankSum=7.673;DP=573;FS=42.612;HRun=0;HaplotypeScore=190.4662;InbreedingCoeff=0.7744;MQ=59.85;MQ0=2;MQRankSum=-11.682;QD=27.72;ReadPosRankSum=-2.718;VQSLOD=2.6835;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:32,8:41:39.05:1136,39,0	1/1:6,1:7:6.02:246,6,0	0/0:29,0:25:27.05:0,27,506	0/0:22,0:19:15.05:0,15,252	0/0:29,0:29:48.16:0,48,1177	1/1:15,3:17:9.03:317,9,0	1/1:5,3:8:3.01:123,3,0	1/1:39,0:39:33.07:930,33,0	1/1:12,7:19:27.05:831,27,0	0/0:22,0:22:48.16:0,48,1187	0/0:18,0:18:45.15:0,45,1011	1/1:12,5:17:24.04:810,24,0	1/1:17,7:24:24.04:881,24,0	1/1:13,6:19:9.03:352,9,0	0/0:29,0:29:63.19:0,63,1477	0/0:30,0:30:60.19:0,60,1430	1/1:9,4:13:12.01:362,12,0	1/1:7,1:8:6.02:236,6,0	1/1:19,4:20:12.04:493,12,0	1/1:17,6:23:18.04:555,18,0	1/1:30,1:31:12.01:233,12,0	1/1:12,6:18:9.02:271,9,0	1/1:14,6:20:14.87:563,15,0	1/1:11,2:13:13.27:396,13,0	1/1:12,2:14:9.03:360,9,0	0/1:13,5:17:42.35:944,0,42	1/1:12,4:16:15.01:512,15,0	1/1:2,3:5:9.03:370,9,0
chr10	22821822	.	TC	T	10383.42	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=16.129;DP=517;FS=12.962;HRun=3;HaplotypeScore=137.1817;InbreedingCoeff=0.9822;MQ=61.91;MQ0=0;MQRankSum=-7.555;QD=29.92;ReadPosRankSum=2.851;VQSLOD=3.0976;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,29:31:66.21:817,66,0	1/1:0,5:5:15.05:186,15,0	0/0:23,0:23:60.67:0,61,844	0/0:23,0:22:54.18:0,54,748	0/0:22,0:22:63.21:0,63,893	1/1:1,13:14:33.10:409,33,0	1/1:1,15:16:45.14:556,45,0	1/1:2,19:21:54.17:669,54,0	1/1:1,17:18:48.15:594,48,0	0/0:27,0:27:78.26:0,78,1108	0/0:18,0:18:51.17:0,51,730	1/1:2,12:14:36.11:445,36,0	1/1:1,22:23:48.09:762,48,0	1/1:2,14:16:42.13:520,42,0	0/0:28,0:28:81.27:0,81,1166	0/0:29,0:29:84.28:0,84,1208	1/1:1,15:16:36.11:446,36,0	1/1:0,8:8:24.08:297,24,0	1/1:2,10:12:30.06:356,30,0	1/1:1,18:19:45.14:558,45,0	1/1:1,24:25:48.15:595,48,0	1/1:0,13:13:33.10:409,33,0	1/1:1,26:27:62.85:780,63,0	1/1:0,13:13:24.07:297,24,0	1/1:1,11:12:30.09:372,30,0	1/1:3,16:19:7.91:534,8,0	1/1:1,15:16:42.13:520,42,0	1/1:2,7:9:21.07:260,21,0
chr10	22821911	.	A	ATT	10554.80	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=14.577;DP=409;FS=2.426;HRun=5;HaplotypeScore=106.1111;InbreedingCoeff=0.9475;MQ=86.64;MQ0=0;MQRankSum=-15.014;QD=40.75;ReadPosRankSum=0.304;VQSLOD=3.7179;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,12:17:36.12:624,36,0	1/1:3,8:11:24.08:416,24,0	0/0:24,0:24:66.17:0,66,815	0/0:16,0:16:32.76:0,33,382	0/0:20,0:20:54.17:0,54,688	1/1:0,10:9:30.10:521,30,0	1/1:3,8:11:21.07:364,21,0	1/1:6,16:22:54.15:903,54,0	1/1:4,6:10:21.07:354,21,0	0/0:28,0:28:78.25:0,78,994	0/0:18,0:18:54.17:0,54,688	1/1:0,8:8:24.08:412,24,0	1/1:5,9:14:33.11:553,33,0	1/1:4,3:7:15.01:228,15,0	0/0:19,0:19:48.15:0,48,612	0/0:24,1:25:20.06:0,20,814	1/1:1,4:5:9.03:156,9,0	1/1:0,6:6:18.06:309,18,0	1/1:5,4:9:12.01:175,12,0	1/1:3,24:26:75.21:1266,75,0	1/1:3,2:5:6.02:104,6,0	1/1:2,13:15:33.11:561,33,0	1/1:3,13:16:45.15:778,45,0	1/1:2,3:5:9.03:153,9,0	1/1:0,15:15:42.14:724,42,0	1/1:3,8:11:30.06:476,30,0	1/1:4,18:22:57.16:958,57,0	1/1:3,10:13:30.10:521,30,0
chr10	22821989	.	A	AT	6778.97	PASS	AB=0.560;AC=41;AF=0.732;AN=56;BaseQRankSum=15.547;DP=378;FS=2.797;HRun=0;HaplotypeScore=166.7259;InbreedingCoeff=0.8697;MQ=83.65;MQ0=0;MQRankSum=-15.151;QD=32.75;ReadPosRankSum=0.286;VQSLOD=4.2491;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,5:6:14.96:169,15,0	1/1:0,7:7:21.07:267,21,0	0/0:17,0:17:48.08:0,48,565	0/0:14,0:14:20.17:0,20,339	0/0:36,0:36:99:0,105,1312	1/1:1,11:12:36.03:437,36,0	1/1:0,7:7:18.06:227,18,0	1/1:7,12:19:44.35:538,44,0	1/1:1,9:10:22.32:303,22,0	0/0:26,0:26:78.18:0,78,964	0/0:25,0:25:75.19:0,75,924	1/1:1,10:11:28.84:326,29,0	1/1:2,11:13:34.92:420,35,0	1/1:1,12:13:39.06:479,39,0	0/0:23,0:23:66.22:0,66,920	0/0:29,1:30:46.14:0,46,1031	1/1:0,4:4:12.04:153,12,0	1/1:0,3:3:9.03:114,9,0	1/1:3,10:13:36.97:439,37,0	1/1:3,21:24:68.83:817,69,0	1/1:0,1:1:2.94:18,3,0	1/1:0,9:9:26.67:314,27,0	1/1:2,6:8:21:243,21,0	1/1:0,3:3:9.03:113,9,0	1/1:1,10:11:28.98:376,29,0	0/1:3,11:14:2.70:360,0,3	1/1:2,14:15:44.56:554,45,0	1/1:0,3:3:9.03:113,9,0
chr10	22822006	.	T	TC	3547.38	PASS	AB=0.529;AC=41;AF=0.732;AN=56;BaseQRankSum=14.604;DP=302;FS=0.428;HRun=0;HaplotypeScore=141.6857;InbreedingCoeff=0.7611;MQ=97.13;MQ0=0;MQRankSum=-14.335;QD=27.08;ReadPosRankSum=5.011;VQSLOD=3.5604;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,4:4:12:106,12,0	1/1:0,5:5:15.02:142,15,0	0/0:22,0:22:60.02:0,60,791	0/0:13,0:13:18.17:0,18,343	0/0:40,0:40:99:0,117,1603	1/1:0,11:11:33.04:306,33,0	1/1:0,4:4:9.01:83,9,0	1/1:0,3:3:9.02:88,9,0	1/1:0,9:9:24.02:221,24,0	0/0:25,0:25:69.22:0,69,936	0/0:23,0:23:66.22:0,66,923	1/1:1,8:9:26.99:241,27,0	1/1:0,13:13:39.04:363,39,0	1/1:0,7:7:21.02:200,21,0	0/0:20,0:20:60.20:0,60,839	0/0:27,1:28:55.57:0,56,1088	1/1:0,2:2:6.01:55,6,0	1/1:0,1:1:3:28,3,0	1/1:1,5:6:15.03:150,15,0	1/1:0,15:15:45.06:429,45,0	1/1:0,1:1:3:28,3,0	1/1:0,5:5:15.02:139,15,0	1/1:0,5:5:15.02:140,15,0	1/1:0,2:2:6:54,6,0	1/1:0,8:8:24.04:229,24,0	0/1:1,8:9:14.92:203,0,15	1/1:0,11:10:33.04:312,33,0	1/1:0,1:1:3:29,3,0
chr10	22822008	.	T	TG	3071.53	PASS	AB=0.529;AC=41;AF=0.732;AN=56;BaseQRankSum=14.660;DP=302;FS=0.000;HRun=0;HaplotypeScore=142.9312;InbreedingCoeff=0.7609;MQ=98.05;MQ0=0;MQRankSum=-14.386;QD=22.92;ReadPosRankSum=5.871;VQSLOD=4.4287;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,4:4:11.99:102,12,0	1/1:0,5:5:15:130,15,0	0/0:22,0:22:66.13:0,66,845	0/0:14,0:14:32.56:0,33,385	0/0:39,0:39:99:0,114,1578	1/1:1,11:12:33:287,33,0	1/1:1,4:5:9:78,9,0	1/1:1,3:4:8.29:84,8,0	1/1:0,9:9:23.99:206,24,0	0/0:23,0:23:66.21:0,66,903	0/0:23,0:23:69.22:0,69,950	1/1:0,8:9:26.94:223,27,0	1/1:0,13:13:38.95:330,39,0	1/1:0,7:7:20.73:164,21,0	0/0:20,0:20:60.20:0,60,838	0/0:26,1:27:55.23:0,55,1046	1/1:0,2:2:6:52,6,0	1/1:0,1:1:3:26,3,0	1/1:0,5:6:15.02:143,15,0	1/1:0,14:15:44.97:384,45,0	1/1:0,1:1:3:27,3,0	1/1:0,5:5:14.99:127,15,0	1/1:0,5:5:14.99:128,15,0	1/1:0,2:2:6:51,6,0	1/1:0,8:8:24:208,24,0	0/1:1,8:9:14.92:195,0,15	1/1:0,11:10:33.01:294,33,0	1/1:0,1:1:3:27,3,0
chr10	22822011	.	G	GAATCTT	18032.48	PASS	AB=0.791;AC=42;AF=0.750;AN=56;BaseQRankSum=14.693;DP=355;FS=1.787;HRun=0;HaplotypeScore=151.4525;InbreedingCoeff=0.7113;MQ=91.39;MQ0=0;MQRankSum=-15.537;QD=85.87;ReadPosRankSum=2.888;VQSLOD=6.3550;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,4:5:15.05:405,15,0	1/1:1,5:6:18.06:657,18,0	0/0:21,0:21:59.40:0,59,1316	0/0:15,0:15:27.98:0,28,754	0/0:40,0:40:99:0,120,2870	1/1:5,11:16:45.15:1547,45,0	1/1:3,4:7:12.04:435,12,0	1/1:9,3:12:36.12:1239,36,0	1/1:3,9:12:33.11:1045,33,0	0/0:24,0:24:66.23:0,66,1617	0/0:24,0:24:72.22:0,72,1619	1/1:0,9:9:27.09:981,27,0	1/1:3,12:16:48.16:1729,48,0	1/1:2,7:9:24.08:875,24,0	0/0:21,0:21:63.20:0,63,1503	0/1:25,1:26:40.15:40,0,1554	1/1:2,2:4:6.02:219,6,0	1/1:1,1:2:6.02:211,6,0	1/1:8,5:13:39.09:1207,39,0	1/1:5,14:19:57.20:2016,57,0	1/1:1,1:2:6.02:158,6,0	1/1:2,5:7:21.07:760,21,0	1/1:0,5:5:15.05:541,15,0	1/1:2,2:4:9.03:293,9,0	1/1:2,8:10:30.10:1092,30,0	0/1:5,8:13:34.81:1178,0,35	1/1:2,10:11:36.12:1295,36,0	1/1:0,1:1:3.01:109,3,0
chr10	22822178	.	TG	T	11088.58	PASS	AB=0.533;AC=41;AF=0.732;AN=56;BaseQRankSum=14.624;DP=456;FS=69.396;HRun=1;HaplotypeScore=66.7156;InbreedingCoeff=0.9052;MQ=95.64;MQ0=0;MQRankSum=-11.401;QD=36.84;ReadPosRankSum=1.784;VQSLOD=-0.6780;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,21:21:60.20:821,60,0	1/1:0,9:9:27.05:350,27,0	0/0:28,0:28:81.25:0,81,1251	0/0:21,0:21:60.18:0,60,856	0/0:18,0:18:54.18:0,54,855	1/1:0,19:19:54.18:738,54,0	1/1:0,12:12:27.05:355,27,0	1/1:0,20:20:60.17:797,60,0	1/1:0,21:21:54.18:738,54,0	0/0:22,0:22:66.23:0,66,1055	0/0:17,0:17:51.15:0,51,769	1/1:0,11:11:24.08:320,24,0	1/1:0,14:14:42.14:569,42,0	1/1:0,13:13:36.12:486,36,0	0/0:24,0:24:72.25:0,72,1149	0/0:25,0:25:33.60:0,34,1081	1/1:0,13:13:36.12:503,36,0	1/1:0,6:6:18.06:252,18,0	1/1:0,22:22:63.21:880,63,0	1/1:0,12:12:33.11:456,33,0	1/1:0,19:19:45.15:629,45,0	1/1:0,12:12:30.10:419,30,0	1/1:0,12:12:33.11:461,33,0	1/1:0,19:19:51.17:697,51,0	1/1:0,7:7:18.06:251,18,0	0/1:2,14:16:28.82:488,0,29	1/1:0,12:12:36.12:502,36,0	1/1:0,11:11:27.09:377,27,0
chr10	22822346	.	A	ATCATTT	7321.08	PASS	AB=0.774;AC=29;AF=0.558;AN=52;BaseQRankSum=11.941;DP=234;FS=47.381;HRun=0;HaplotypeScore=107.0943;InbreedingCoeff=0.3191;MQ=58.54;MQ0=0;MQRankSum=-10.194;QD=69.07;ReadPosRankSum=1.124;VQSLOD=3.1302;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,1:3:6.02:137,6,0	0/1:3,4:7:37.92:455,0,38	./.	0/0:4,0:4:3.90:0,4,79	0/0:28,0:28:81.27:0,81,2000	0/1:4,3:7:9:401,0,9	1/1:1,2:4:10.59:275,11,0	0/1:17,0:17:89.97:671,0,90	1/1:3,7:10:30.10:886,30,0	0/0:24,0:24:72.24:0,72,1758	0/0:25,0:25:75.26:0,75,1922	0/1:2,0:2:13.84:42,0,14	0/1:1,1:2:7.03:97,0,7	0/0:1,0:1:2.92:0,3,17	0/0:20,0:20:60.16:0,60,1381	0/0:23,0:23:69.22:0,69,1669	0/1:2,1:3:19.66:101,0,20	1/1:0,3:3:9.03:301,9,0	1/1:5,9:14:21.09:1063,21,0	0/1:4,4:8:9.21:526,0,9	1/1:1,0:1:2.99:24,3,0	1/1:0,1:1:3.01:103,3,0	0/0:1,0:1:3:0,3,29	./.	1/1:0,4:4:12.04:410,12,0	1/1:3,4:7:21.07:638,21,0	1/1:3,5:9:27.09:781,27,0	1/1:0,4:4:12.04:411,12,0
chr10	22822348	.	ATG	A	1908.67	PASS	AC=38;AF=0.760;AN=50;BaseQRankSum=12.396;DP=224;FS=33.005;HRun=0;HaplotypeScore=97.3368;InbreedingCoeff=0.7313;MQ=58.66;MQ0=0;MQRankSum=-12.398;QD=18.35;ReadPosRankSum=-0.548;VQSLOD=1.7329;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,1:3:5.90:42,6,0	1/1:4,3:7:20.58:145,21,0	./.	0/0:4,0:4:3.01:0,3,45	0/0:27,0:27:78.25:0,78,1377	1/1:3,4:7:20.74:158,21,0	1/1:3,1:4:8.78:57,9,0	1/1:0,17:17:51.08:495,51,0	1/1:8,2:10:26.18:162,26,0	0/0:24,0:24:63.22:0,63,1139	0/0:25,0:25:75.24:0,75,1321	1/1:0,1:1:3:27,3,0	1/1:1,1:2:5.90:43,6,0	1/1:0,1:1:3:27,3,0	0/0:18,0:18:54.17:0,54,949	0/0:21,0:21:60.16:0,60,1005	1/1:1,2:3:5.93:44,6,0	1/1:3,0:3:8.84:55,9,0	1/1:9,5:14:41.52:308,42,0	1/1:4,3:7:20.59:144,21,0	./.	1/1:1,0:1:2.90:16,3,0	1/1:1,0:1:3:27,3,0	./.	1/1:4,0:4:11.61:64,12,0	1/1:5,1:6:14.72:98,15,0	1/1:8,1:9:17.08:103,17,0	1/1:4,0:4:11.62:67,12,0
chr10	22822349	.	T	TCCAAAA	7129.52	PASS	AC=38;AF=0.760;AN=50;BaseQRankSum=12.479;DP=222;FS=30.559;HRun=0;HaplotypeScore=112.9961;InbreedingCoeff=0.7313;MQ=58.70;MQ0=0;MQRankSum=-12.533;QD=68.55;ReadPosRankSum=-0.222;VQSLOD=2.7455;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,1:3:6.02:136,6,0	1/1:3,4:7:20.56:492,21,0	./.	0/0:3,0:4:3.90:0,4,79	0/0:27,0:27:78.25:0,78,1938	1/1:4,3:7:20.28:446,20,0	1/1:1,2:3:9.03:230,9,0	1/1:17,0:17:50.65:1009,51,0	1/1:3,7:10:26.88:755,27,0	0/0:23,0:23:69.19:0,69,1624	0/0:25,0:25:75.26:0,75,1921	1/1:1,0:1:3.01:65,3,0	1/1:1,1:2:5.23:100,5,0	1/1:1,0:1:3.01:44,3,0	0/0:18,0:18:54.17:0,54,1331	0/0:20,0:20:60.21:0,60,1535	1/1:2,1:3:9.02:120,9,0	1/1:0,3:3:9.03:286,9,0	1/1:5,9:14:42.14:1135,42,0	1/1:4,4:8:20.56:519,21,0	./.	1/1:0,1:1:3.01:92,3,0	1/1:1,0:1:2.60:10,3,0	./.	1/1:0,4:4:12.04:374,12,0	1/1:2,4:6:15.01:469,15,0	1/1:4,5:9:6.70:492,7,0	1/1:0,4:4:12.04:356,12,0
chr10	22822356	.	ATG	A	4196.68	PASS	AC=38;AF=0.760;AN=50;BaseQRankSum=12.448;DP=231;FS=18.776;HRun=0;HaplotypeScore=90.6988;InbreedingCoeff=0.7429;MQ=57.51;MQ0=0;MQRankSum=-11.910;QD=34.97;ReadPosRankSum=-0.617;VQSLOD=3.9129;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,2:3:6.02:78,6,0	1/1:0,7:7:21.07:286,21,0	./.	0/0:4,0:4:2.98:0,3,22	0/0:26,0:26:78.25:0,78,1441	1/1:0,7:7:21.06:270,21,0	1/1:1,3:4:9.03:123,9,0	1/1:0,23:23:66.13:754,66,0	1/1:0,10:10:27.09:383,27,0	0/0:20,0:20:60.21:0,60,1159	0/0:24,0:24:69.21:0,69,1231	1/1:0,1:1:3.01:35,3,0	1/1:0,4:4:6.02:79,6,0	1/1:0,3:3:3.01:34,3,0	0/0:17,0:17:51.13:0,51,884	0/0:19,0:19:57.18:0,57,1033	1/1:0,3:3:5.88:49,6,0	1/1:0,5:5:12.04:172,12,0	1/1:0,16:16:48.15:652,48,0	1/1:0,9:9:21.07:284,21,0	./.	1/1:0,1:1:3.01:43,3,0	1/1:0,1:1:3.01:37,3,0	./.	1/1:0,4:4:12.04:178,12,0	1/1:0,6:6:18.06:255,18,0	1/1:0,7:7:21.07:296,21,0	1/1:2,4:6:14.84:189,15,0
chr10	22829404	.	G	GATAA	32714.36	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-11.112;DP=631;FS=7.200;HRun=0;HaplotypeScore=84.5339;InbreedingCoeff=0.9996;MQ=79.88;MQ0=0;MQRankSum=-7.630;QD=60.36;ReadPosRankSum=2.012;VQSLOD=6.6513;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,18:20:42.14:1106,42,0	1/1:2,10:12:30.10:792,30,0	0/0:19,0:20:49.53:0,50,911	0/0:16,0:16:35.40:0,35,634	1/1:5,21:26:63.22:1618,63,0	1/1:4,22:26:57.20:1465,57,0	1/1:3,10:14:30.10:752,30,0	1/1:6,25:33:87.30:2167,87,0	1/1:3,13:16:39.13:1029,39,0	1/1:1,20:23:63.21:1582,63,0	1/1:4,21:26:63.21:1579,63,0	1/1:2,18:20:48.16:1267,48,0	1/1:5,15:21:48.16:1254,48,0	1/1:4,19:23:57.07:1326,57,0	0/0:23,0:23:69.22:0,69,1239	0/0:30,0:30:84.29:0,84,1535	1/1:3,17:21:39.13:1029,39,0	1/1:3,19:22:43.43:1446,43,0	1/1:6,13:19:48.16:1238,48,0	1/1:3,20:23:60.16:1524,60,0	1/1:5,16:22:45.02:1010,45,0	1/1:1,21:25:66.14:1579,66,0	1/1:3,23:27:57.20:1464,57,0	1/1:4,14:18:39.07:929,39,0	1/1:3,22:25:63.22:1661,63,0	1/1:5,25:31:81.26:1986,81,0	1/1:7,24:32:75.26:1921,75,0	1/1:3,13:17:42.06:990,42,0
chr10	22829736	.	G	GA	549.33	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.899;DP=638;FS=9.191;HRun=1;HaplotypeScore=96.4998;InbreedingCoeff=0.9973;MQ=87.97;MQ0=0;MQRankSum=-6.829;QD=9.16;ReadPosRankSum=-0.431;VQSLOD=0.3163;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,129,1662	0/0:9,0:9:24.08:0,24,311	0/0:20,0:20:57.11:0,57,700	0/0:27,0:28:46.76:0,47,787	1/1:11,12:23:27.28:159,27,0	0/0:22,0:22:63.20:0,63,817	0/0:18,0:18:54.14:0,54,671	0/0:32,0:32:93.30:0,93,1197	0/0:19,0:19:57.17:0,57,727	1/1:14,9:23:55.14:366,55,0	1/1:9,5:14:29.77:167,30,0	0/0:19,0:19:57.19:0,57,740	0/0:24,0:24:66.17:0,66,834	0/0:28,0:28:84.25:0,84,1064	0/0:32,0:32:96.31:0,96,1246	0/0:31,0:31:93.28:0,93,1179	0/0:29,0:29:87.25:0,87,1099	0/0:15,0:15:45.12:0,45,567	0/0:18,0:18:54.17:0,54,690	0/0:23,0:23:66.21:0,66,844	0/0:25,0:25:69.21:0,69,881	0/0:24,0:24:72.23:0,72,923	0/0:21,0:21:63.20:0,63,803	0/0:16,0:16:48.16:0,48,623	0/0:23,0:23:66.20:0,66,832	0/0:26,0:26:69.02:0,69,948	0/0:25,0:25:72.23:0,72,927	0/0:7,0:7:21.07:0,21,272
chr10	22829737	.	ATTTGAG	A	1459.60	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.612;DP=641;FS=1.356;HRun=0;HaplotypeScore=158.2947;InbreedingCoeff=0.9949;MQ=88.85;MQ0=0;MQRankSum=-6.718;QD=24.74;ReadPosRankSum=1.061;VQSLOD=3.0713;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,132,4860	0/0:9,0:9:27.09:0,27,1000	0/0:22,0:22:66.23:0,66,2297	0/0:28,0:28:45.24:0,45,2171	1/1:11,11:22:21.01:388,21,0	0/0:22,0:22:66.23:0,66,2467	0/0:19,0:19:57.16:0,57,1942	0/0:32,0:32:93.32:0,93,3381	0/0:19,0:19:57.18:0,57,2058	1/1:9,14:23:47.48:790,47,0	1/1:5,9:14:21.51:423,22,0	0/0:19,0:19:57.20:0,57,2145	0/0:23,0:23:69.19:0,69,2483	0/0:28,0:28:84.29:0,84,3006	0/0:32,0:32:96.33:0,96,3487	0/0:31,0:31:93.31:0,93,3411	0/0:29,0:29:87.30:0,87,3274	0/0:15,0:15:45.15:0,45,1667	0/0:19,0:19:57.20:0,57,2000	0/0:23,0:23:69.24:0,69,2522	0/0:25,0:25:75.24:0,75,2703	0/0:24,0:24:72.25:0,72,2649	0/0:21,0:21:63.21:0,63,2284	0/0:16,0:16:48.16:0,48,1805	0/0:24,0:24:72.24:0,72,2503	0/0:25,1:26:25.59:0,26,2636	0/0:25,0:25:75.26:0,75,2781	0/0:7,0:7:21.07:0,21,790
chr10	22829745	.	TGCCGCCAAGATGGAAA	T	3811.86	PASS	AB=0.958;AC=7;AF=0.125;AN=56;BaseQRankSum=10.162;DP=614;FS=2.141;HRun=0;HaplotypeScore=276.7726;InbreedingCoeff=0.8348;MQ=91.28;MQ0=0;MQRankSum=-8.183;QD=62.49;ReadPosRankSum=1.634;VQSLOD=2.7828;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,126,9145	0/0:9,0:9:27.09:0,27,2030	0/0:27,0:27:81.23:0,81,4883	0/0:25,0:25:64.67:0,65,3756	1/1:1,11:12:30.08:965,30,0	0/0:24,0:24:69.69:0,70,4834	0/0:19,0:19:57.20:0,57,4224	0/0:31,0:31:93.30:0,93,5420	0/0:18,0:18:54.19:0,54,4277	1/1:2,14:16:48.15:1788,48,0	1/1:1,9:10:27.06:1005,27,0	0/0:20,0:20:60.18:0,60,4436	0/0:24,0:24:72.23:0,72,5459	0/0:25,0:25:75.23:0,75,5524	0/0:28,0:28:84.27:0,84,6114	0/0:31,0:31:93.31:0,93,6646	0/0:30,0:30:90.26:0,90,6421	0/0:16,0:16:48.16:0,48,3678	0/0:20,0:20:60.21:0,60,4132	0/0:24,0:24:72.23:0,72,5062	0/0:26,0:26:78.25:0,78,5260	0/0:24,0:24:72.24:0,72,4797	0/0:21,0:21:63.20:0,63,4449	0/0:16,0:16:48.16:0,48,3242	0/0:20,0:20:60.21:0,60,4579	0/1:22,1:23:53.26:53,0,5013	0/0:26,0:26:78.25:0,78,5206	0/0:7,0:7:21.07:0,21,1408
chr10	22830167	.	GA	G	7609.07	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=15.799;DP=632;FS=3.210;HRun=9;HaplotypeScore=70.6544;InbreedingCoeff=0.9815;MQ=76.53;MQ0=0;MQRankSum=-1.410;QD=22.71;ReadPosRankSum=0.914;VQSLOD=5.7708;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,30:34:72.03:659,72,0	0/0:15,0:15:39.11:0,39,442	0/0:17,0:16:21.06:0,21,237	0/0:16,0:16:32.22:0,32,368	0/0:27,0:27:66.18:0,66,751	1/1:1,26:27:75.04:686,75,0	1/1:2,12:14:33.01:302,33,0	1/1:5,34:39:99:921,102,0	0/0:19,0:19:45.13:0,45,519	0/0:17,0:17:42.12:0,42,475	0/0:22,0:22:60.18:0,60,693	1/1:2,23:25:63.03:576,63,0	1/1:2,26:28:75.04:685,75,0	1/1:2,23:25:60.03:549,60,0	0/0:26,0:26:66.18:0,66,751	0/0:36,0:36:93.24:0,93,1053	0/0:10,1:11:5.56:0,6,289	0/0:25,0:25:69.16:0,69,770	0/0:23,0:23:54.15:0,54,615	0/0:23,1:24:32.72:0,33,630	0/0:18,0:18:42.10:0,42,465	1/1:2,18:20:51.02:466,51,0	1/1:4,17:21:45.01:412,45,0	1/1:0,11:11:33.02:302,33,0	1/1:3,26:29:72.04:659,72,0	1/1:3,23:26:68.99:623,69,0	1/1:3,28:31:68.86:631,69,0	1/1:0,5:5:15.01:137,15,0
chr10	22830334	.	TA	T	3445.29	PASS	AB=1.000;AC=10;AF=0.179;AN=56;BaseQRankSum=-3.682;DP=578;FS=9.512;HRun=1;HaplotypeScore=84.0649;InbreedingCoeff=0.4016;MQ=72.13;MQ0=0;MQRankSum=-0.179;QD=22.09;ReadPosRankSum=-4.273;VQSLOD=1.8203;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:3.91:0,4,121	0/0:15,0:15:45.12:0,45,619	0/0:12,0:12:32.07:0,32,406	0/0:6,0:6:16.84:0,17,172	1/1:0,36:36:99:1369,105,0	0/0:29,0:28:31.22:0,31,165	0/0:11,0:11:18.35:0,18,65	0/0:45,0:45:61.35:0,61,232	0/0:13,0:13:39.11:0,39,544	1/1:0,23:23:69.21:930,69,0	1/1:0,23:23:66.09:856,66,0	0/1:21,0:21:52.03:84,0,52	0/0:19,0:19:17.89:0,18,105	0/0:13,0:13:25.20:0,25,81	0/0:19,0:19:57.11:0,57,789	0/0:26,0:26:78.21:0,78,1065	0/0:17,0:17:51.04:0,51,657	0/0:18,0:18:54.16:0,54,768	0/0:18,0:18:54.14:0,54,735	0/0:34,0:34:99:0,102,1448	0/0:12,0:12:36.06:0,36,483	0/0:12,0:12:0.81:0,1,53	0/0:21,0:21:5.42:0,5,104	0/1:13,0:13:37.83:49,0,38	0/0:23,0:23:2.49:0,2,85	0/0:33,0:33:10.86:0,11,127	0/1:32,0:32:99:127,0,109	0/1:8,0:8:26.46:30,0,26
chr10	22832236	.	C	CAAA	6810.17	PASS	AB=1.000;AC=47;AF=0.839;AN=56;BaseQRankSum=3.426;DP=386;FS=0.000;HRun=11;HaplotypeScore=219.5811;InbreedingCoeff=0.7309;MQ=75.87;MQ0=4;MQRankSum=-7.136;QD=22.18;ReadPosRankSum=-0.878;VQSLOD=0.9461;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,0:7:5.63:37,6,0	1/1:2,0:4:12.02:138,12,0	0/0:18,0:13:12.91:0,13,101	0/0:29,0:25:18.02:0,18,195	1/1:16,8:25:51.04:808,51,0	1/1:14,0:13:26.81:277,27,0	0/1:4,0:4:3.91:42,0,4	1/1:16,0:12:19.62:190,20,0	1/1:10,0:11:29.56:411,30,0	1/1:14,7:21:48.10:745,48,0	1/1:12,6:22:39.09:639,39,0	1/1:5,0:5:7.25:59,7,0	1/1:13,0:13:23.61:243,24,0	1/1:15,0:14:23.92:199,24,0	0/0:9,0:9:14.91:0,15,175	0/0:17,0:18:42:0,42,473	1/1:13,0:18:48.08:664,48,0	1/1:4,0:8:11.25:136,11,0	1/1:11,0:13:24.08:337,24,0	1/1:7,0:12:33.09:477,33,0	1/1:6,0:5:3.38:11,3,0	1/1:7,0:7:7.88:42,8,0	1/1:8,0:7:12.03:89,12,0	1/1:2,0:2:2.94:18,3,0	1/1:15,0:14:10.95:215,11,0	1/1:23,0:23:45.41:427,45,0	1/1:17,0:17:32.91:259,33,0	1/1:21,0:20:25.44:349,25,0
chr10	22832247	.	ACAG	A	1033.50	PASS	AB=0.966;AC=20;AF=0.357;AN=56;BaseQRankSum=4.361;DP=373;FS=42.537;HRun=0;HaplotypeScore=124.3936;InbreedingCoeff=-0.3042;MQ=61.12;MQ0=4;MQRankSum=-1.876;QD=5.04;ReadPosRankSum=-2.345;VQSLOD=0.8828;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:8,0:9:31.53:173,0,32	0/1:4,0:4:39.55:40,0,72	0/0:22,0:11:9.23:0,9,286	0/0:29,0:20:12.96:0,13,377	0/0:22,0:22:41.83:0,42,774	0/1:15,0:15:28.39:28,0,563	0/1:3,0:3:55.04:59,0,55	0/1:17,1:14:99:101,0,325	0/0:11,0:11:18.37:0,18,495	0/1:25,0:25:7.41:7,0,924	0/0:22,0:22:10.52:0,11,726	0/1:4,0:4:14.61:15,0,100	0/1:9,0:10:11.90:12,0,266	0/1:9,0:9:90.93:91,0,214	0/0:9,0:9:27.09:0,27,568	0/0:18,0:18:51.17:0,51,1044	0/1:18,0:18:35.10:35,0,591	0/0:4,0:5:6.64:0,7,122	0/0:14,0:14:19.71:0,20,534	0/0:14,0:14:11.68:0,12,473	1/1:2,0:2:3.11:9,3,0	1/1:1,2:3:9.03:106,9,0	0/1:5,1:5:43.07:43,0,130	0/1:4,0:4:14.29:14,0,50	0/1:13,0:12:61.56:62,0,283	0/1:26,0:26:99:221,0,735	0/1:19,2:21:99:106,0,632	0/1:12,1:12:73.94:74,0,396
chr10	22832259	.	AGATTT	A	2125.59	PASS	AB=0.924;AC=18;AF=0.321;AN=56;BaseQRankSum=5.961;DP=399;FS=41.129;HRun=0;HaplotypeScore=139.4284;InbreedingCoeff=-0.3608;MQ=68.31;MQ0=4;MQRankSum=-2.716;QD=10.47;ReadPosRankSum=-1.969;VQSLOD=1.3345;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:7,1:8:76.83:271,0,77	0/1:7,0:7:99:164,0,150	0/0:28,0:16:38.91:0,39,769	0/0:37,0:25:21.02:0,21,1015	0/0:21,0:21:36.62:0,37,1293	0/1:15,0:15:73.42:73,0,662	0/1:5,1:6:99:148,0,129	0/1:23,5:24:99:374,0,787	0/0:9,0:9:20.51:0,21,452	0/1:24,0:24:32.60:33,0,1424	0/0:22,0:22:40.47:0,40,1085	0/1:4,0:4:37.19:37,0,132	0/1:14,0:14:99:113,0,484	0/1:6,2:7:99:140,0,269	0/0:9,0:9:27.09:0,27,757	0/0:18,0:18:51.15:0,51,1399	0/0:16,0:16:15.15:0,15,910	0/0:3,0:3:6.02:0,6,148	0/0:19,0:17:45.06:0,45,1052	0/0:14,0:14:42.13:0,42,1001	1/1:2,0:2:3.01:48,3,0	0/1:2,0:2:49.48:49,0,74	0/1:4,2:5:74.72:75,0,180	0/1:4,0:4:27.56:28,0,36	0/1:15,1:15:99:161,0,476	0/1:21,2:23:99:314,0,1063	0/1:22,2:24:99:171,0,956	0/1:10,2:11:86.68:87,0,518
chr10	22832260	.	GATTT	G	2256.93	PASS	AB=0.872;AC=19;AF=0.339;AN=56;BaseQRankSum=6.224;DP=394;FS=29.955;HRun=0;HaplotypeScore=130.1021;InbreedingCoeff=-0.3211;MQ=67.09;MQ0=4;MQRankSum=-2.562;QD=11.17;ReadPosRankSum=-2.183;VQSLOD=0.8009;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:8,0:8:56.55:222,0,57	0/1:3,0:7:99:129,0,126	0/0:27,0:16:39.02:0,39,659	0/0:35,0:23:17.85:0,18,852	0/0:21,0:21:1.67:0,2,1009	0/1:14,0:15:80.87:81,0,553	0/1:4,2:6:99:144,0,118	0/1:18,10:24:99:599,0,716	0/0:9,0:9:20.74:0,21,412	0/1:22,0:24:23.71:24,0,1260	0/0:21,0:21:6.84:0,7,862	0/1:3,0:4:29.16:29,0,110	0/1:9,5:14:99:204,0,450	0/1:8,0:7:87.35:87,0,249	0/0:9,0:9:27.09:0,27,701	0/0:18,0:18:48.16:0,48,1252	0/0:15,0:15:5.19:0,5,771	0/0:3,0:3:6.02:0,6,128	0/0:18,0:17:42.10:0,42,939	0/0:14,0:14:42.13:0,42,969	1/1:0,0:2:3.01:42,3,0	0/1:2,0:2:46.47:46,0,72	0/1:5,1:5:86.14:86,0,171	1/1:4,0:4:2.50:23,3,0	0/1:13,3:15:99:211,0,472	0/1:22,0:22:99:235,0,935	0/1:24,0:24:99:138,0,783	0/1:10,2:11:99:116,0,465
chr10	22832264	.	T	TAAAAAAAAAAAG	25262.09	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=3.852;DP=437;FS=12.109;HRun=0;HaplotypeScore=245.3065;InbreedingCoeff=0.8526;MQ=65.49;MQ0=3;MQRankSum=-9.004;QD=72.80;ReadPosRankSum=0.779;VQSLOD=3.3112;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,0:11:21.06:766,21,0	1/1:7,0:7:15.05:312,15,0	0/0:29,0:16:23.31:0,23,478	0/0:32,0:22:17.75:0,18,576	1/1:16,6:26:54.18:1952,54,0	1/1:11,0:17:39.13:1236,39,0	1/1:7,0:7:14.75:266,15,0	1/1:31,0:27:76.09:2171,76,0	1/1:8,0:8:15.05:591,15,0	1/1:19,6:31:72.16:2869,72,0	1/1:12,8:28:60.15:2402,60,0	1/1:3,0:6:11.83:308,12,0	1/1:14,0:14:32.94:973,33,0	1/1:6,0:8:15.05:689,15,0	0/0:9,0:9:23.92:0,24,765	0/0:19,0:19:45.15:0,45,1387	1/1:16,0:16:26.14:531,26,0	1/1:3,0:3:3.01:135,3,0	1/1:18,0:16:36.48:1071,36,0	1/1:14,0:14:42.13:1603,42,0	1/1:2,0:2:3.01:62,3,0	1/1:3,0:3:9.03:216,9,0	1/1:6,0:5:12.04:295,12,0	1/1:2,0:8:12.02:378,12,0	1/1:15,0:17:40.07:1232,40,0	1/1:17,0:23:60.21:2365,60,0	1/1:13,0:25:54.10:2048,54,0	1/1:13,0:15:24.88:793,25,0
chr10	22832265	.	A	AAAAAAAAAAAAG	24921.11	PASS	AB=1.000;AC=47;AF=0.839;AN=56;BaseQRankSum=5.018;DP=459;FS=13.733;HRun=0;HaplotypeScore=251.2811;InbreedingCoeff=0.5982;MQ=64.83;MQ0=3;MQRankSum=-9.608;QD=67.35;ReadPosRankSum=2.423;VQSLOD=3.1737;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,0:12:1.43:757,1,0	1/1:7,0:7:15.05:394,15,0	0/0:29,0:16:27.63:0,28,516	0/0:33,0:22:1.49:0,1,579	1/1:26,0:26:49.23:1502,49,0	1/1:17,0:17:39.13:1219,39,0	1/1:7,0:7:16.29:236,16,0	1/1:31,0:27:76.07:1903,76,0	1/1:5,4:11:18.06:737,18,0	1/1:31,0:31:70.69:2261,71,0	1/1:27,0:27:55.41:1815,55,0	1/1:7,0:7:11.76:328,12,0	1/1:15,0:15:36.01:944,36,0	1/1:9,0:8:15.51:688,16,0	0/0:9,0:9:3.09:0,3,762	0/0:18,0:18:48.13:0,48,1449	1/1:14,2:22:27.09:780,27,0	1/1:2,1:3:3.01:173,3,0	1/1:13,6:22:54.64:1954,55,0	1/1:11,3:18:48.16:1938,48,0	1/1:2,0:2:3.01:86,3,0	1/1:3,0:3:9.01:211,9,0	1/1:6,0:5:12.04:292,12,0	1/1:8,0:8:12.02:375,12,0	1/1:18,0:17:19.19:1148,19,0	1/1:25,0:25:61.06:2402,61,0	1/1:25,0:25:54.10:2061,54,0	0/1:16,0:15:59.29:718,0,59
chr10	22832738	.	TCTTGCCGTCTTCACAAG	T	7618.13	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=11.242;DP=565;FS=8.542;HRun=0;HaplotypeScore=255.5393;InbreedingCoeff=0.9817;MQ=83.90;MQ0=0;MQRankSum=-10.865;QD=96.43;ReadPosRankSum=3.953;VQSLOD=3.4005;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,105,8359	1/1:1,8:9:24.08:1206,24,0	0/0:16,0:16:39.12:0,39,2168	0/0:23,0:21:63.21:0,63,2704	0/0:42,0:42:99:0,126,9693	0/0:29,0:29:87.30:0,87,6657	0/0:19,0:19:57.20:0,57,4257	0/0:29,0:29:87.29:0,87,5572	1/1:3,16:19:39.61:1960,40,0	0/0:32,0:32:96.33:0,96,7594	0/0:22,0:22:66.23:0,66,4928	0/0:15,0:15:45.15:0,45,3490	0/0:14,0:14:39.13:0,39,3094	0/0:19,0:19:57.20:0,57,4042	0/0:25,0:25:75.26:0,75,5940	0/0:19,0:19:57.20:0,57,4588	1/1:6,14:20:30.10:1414,30,0	1/1:1,7:8:12.04:603,12,0	1/1:1,7:8:21.07:933,21,0	1/1:1,8:9:21.07:1053,21,0	1/1:3,3:6:9.03:450,9,0	0/0:16,0:16:48.16:0,48,3406	0/0:17,0:17:51.18:0,51,4139	0/0:26,0:25:78.25:0,78,5890	0/0:15,0:15:42.14:0,42,3395	0/0:24,0:24:72.25:0,72,5383	0/0:24,0:24:72.15:0,72,4905	0/0:23,0:23:69.24:0,69,5142
chr10	22833471	.	A	AAT	892.17	PASS	AB=1.000;AC=9;AF=0.180;AN=50;BaseQRankSum=-2.976;DP=287;FS=2.778;HRun=0;HaplotypeScore=34.8256;InbreedingCoeff=0.4649;MQ=64.91;MQ0=0;MQRankSum=0.920;QD=13.32;ReadPosRankSum=-1.564;VQSLOD=2.6850;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:33.11:0,33,420	0/0:3,0:3:6.02:0,6,75	0/0:4,0:3:6.02:0,6,74	0/1:10,0:6:2.65:3,0,66	1/1:5,17:22:42.14:688,42,0	0/0:14,0:15:39.12:0,39,497	0/0:3,0:3:6.01:0,6,63	0/0:47,0:47:99:0,126,1520	./.	1/1:3,4:7:12.02:163,12,0	1/1:2,3:6:9.03:135,9,0	0/0:6,0:6:18.04:0,18,216	0/0:4,0:4:6.02:0,6,75	0/0:4,0:4:12.04:0,12,153	0/1:10,0:10:22.77:23,0,138	0/0:5,0:5:9.03:0,9,115	0/0:22,0:22:54.17:0,54,687	0/0:16,0:16:36.08:0,36,440	0/0:20,0:20:41.67:0,42,509	0/0:8,0:8:21.05:0,21,253	./.	./.	0/0:4,0:4:9.03:0,9,114	0/0:2,0:2:3.01:0,3,38	0/0:10,0:10:24.06:0,24,291	0/1:12,0:12:23.15:23,0,265	0/0:13,0:13:30.10:0,30,382	0/0:19,0:19:57.17:0,57,712
chr10	22834086	.	A	AC	669.78	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-5.310;DP=149;FS=3.679;HRun=5;HaplotypeScore=22.9430;InbreedingCoeff=0.7307;MQ=69.74;MQ0=0;MQRankSum=0.406;QD=20.30;ReadPosRankSum=0.111;VQSLOD=2.0216;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:24.06:0,24,258	1/1:0,3:3:9.03:118,9,0	0/0:4,1:4:12.03:0,12,129	0/0:5,0:5:11.99:0,12,111	0/0:5,0:5:9.01:0,9,88	0/0:3,0:3:6.01:0,6,64	0/0:8,0:8:24.06:0,24,258	0/0:6,0:6:15.04:0,15,160	1/1:1,0:1:3:25,3,0	0/0:4,0:4:12.03:0,12,129	0/0:8,0:8:15.04:0,15,159	0/0:6,0:6:15.02:0,15,161	0/0:10,0:10:24.05:0,24,250	0/0:7,0:7:15.04:0,15,160	0/0:5,0:5:15.04:0,15,161	0/0:7,0:7:18.03:0,18,185	1/1:2,5:7:18.05:223,18,0	1/1:1,2:3:3.01:39,3,0	1/1:0,3:3:9.03:118,9,0	1/1:0,4:4:6.02:78,6,0	1/1:2,10:12:18.06:237,18,0	0/0:2,0:2:3.01:0,3,32	0/0:5,0:5:12.03:0,12,128	0/0:5,0:5:15.04:0,15,161	0/0:6,0:6:12.01:0,12,119	0/0:4,0:4:8.98:0,9,84	0/0:2,0:2:3.01:0,3,32	0/0:3,0:3:6.01:0,6,64
chr10	22834402	.	T	TAAGAACAAC	50548.26	PASS	AB=0.977;AC=49;AF=0.875;AN=56;BaseQRankSum=-12.700;DP=596;FS=16.357;HRun=0;HaplotypeScore=111.8647;InbreedingCoeff=0.7775;MQ=73.17;MQ0=0;MQRankSum=-14.566;QD=97.77;ReadPosRankSum=3.427;VQSLOD=4.0217;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,28:34:78.27:3850,78,0	1/1:0,8:9:24.08:1204,24,0	0/0:19,0:19:37.43:0,37,1051	0/0:19,0:19:50.35:0,50,1587	1/1:0,17:20:51.18:2508,51,0	1/1:0,21:29:63.22:3122,63,0	1/1:0,12:17:36.12:1806,36,0	1/1:1,7:23:66.23:2881,66,0	1/1:0,15:25:39.13:1961,39,0	1/1:1,17:21:57.18:2618,57,0	1/1:0,15:18:45.15:2096,45,0	1/1:0,24:30:66.23:3307,66,0	1/1:0,23:27:66.23:3307,66,0	1/1:1,24:31:72.25:3611,72,0	0/0:41,0:41:99:0,120,3499	0/1:41,1:42:26.80:27,0,3416	1/1:0,3:10:9.03:451,9,0	1/1:1,3:8:9.03:453,9,0	1/1:1,6:16:45.03:1631,45,0	1/1:0,11:13:33.11:1660,33,0	1/1:1,9:13:21.07:1006,21,0	1/1:0,9:16:30:1372,30,0	1/1:0,17:21:45.15:2207,45,0	1/1:1,13:20:31:1279,31,0	1/1:0,10:12:30.10:1508,30,0	1/1:1,16:24:66.21:2619,66,0	1/1:1,25:33:75.26:3763,75,0	1/1:0,2:5:6.02:302,6,0
chr10	22835322	.	T	TGTGTCTGTG	603.05	PASS	AB=0.941;AC=5;AF=0.089;AN=56;BaseQRankSum=6.500;DP=621;FS=13.459;HRun=0;HaplotypeScore=196.3440;InbreedingCoeff=-0.0990;MQ=41.66;MQ0=46;MQRankSum=-5.144;QD=5.15;ReadPosRankSum=1.576;VQSLOD=1.5721;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,1:27:74.97:0,75,1904	0/0:9,0:8:22.27:0,22,447	0/0:24,0:7:20.26:0,20,271	0/0:33,0:11:33.09:0,33,690	0/0:15,0:13:23.04:0,23,583	0/0:21,0:21:44.23:0,44,1181	0/0:26,0:21:53.97:0,54,1339	0/0:24,0:15:45:0,45,775	0/0:25,0:25:72.02:0,72,1778	0/0:22,0:16:36.28:0,36,971	0/0:15,0:9:21.01:0,21,398	0/0:30,0:28:74.97:0,75,1959	0/1:29,0:29:99:121,0,1823	0/0:25,0:25:66.04:0,66,1901	0/1:33,0:32:28.82:29,0,1986	0/0:29,0:28:78.19:0,78,2090	0/0:19,0:19:51.16:0,51,1488	0/0:12,0:12:33.11:0,33,1070	0/0:19,0:11:27.04:0,27,543	0/0:16,0:15:42.09:0,42,1259	0/0:33,0:32:76.51:0,77,2249	0/0:15,0:11:18.59:0,19,247	0/1:11,0:8:96.06:96,0,434	0/1:29,2:31:38.11:38,0,1789	0/0:17,0:15:43.01:0,43,811	0/0:26,0:23:51.56:0,52,1751	0/0:20,0:20:26.45:0,26,678	0/1:9,4:13:99:437,0,669
chr10	22835377	.	TTC	T	1419.81	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-1.545;DP=647;FS=30.159;HRun=0;HaplotypeScore=132.4535;InbreedingCoeff=0.9409;MQ=50.72;MQ0=16;MQRankSum=0.446;QD=22.90;ReadPosRankSum=0.014;VQSLOD=2.0355;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:34:69.12:0,69,784	0/0:5,0:5:6:0,6,73	0/0:39,0:14:21.07:0,21,352	0/0:42,0:24:43.05:0,43,557	1/1:10,9:17:33.01:376,33,0	0/0:21,0:20:54.08:0,54,652	0/0:28,0:27:63.17:0,63,718	0/0:21,0:19:32.97:0,33,340	0/0:30,0:30:75.19:0,75,1180	1/1:11,18:27:59.11:816,59,0	1/1:3,11:13:30.09:371,30,0	0/0:22,0:22:54.06:0,54,619	0/0:24,0:23:57.11:0,57,666	0/0:18,0:17:39.01:0,39,471	0/0:26,0:26:69.10:0,69,1074	0/0:28,0:26:60.19:0,60,958	0/0:24,0:24:26.35:0,26,739	0/0:20,0:20:54:0,54,810	0/0:18,0:12:33.11:0,33,533	0/0:10,0:10:11.35:0,11,268	0/0:42,0:40:81.25:0,81,1280	0/0:14,0:14:26.95:0,27,323	0/0:10,0:10:14.78:0,15,183	0/0:37,0:37:90.17:0,90,1002	0/0:12,1:12:24.07:0,24,298	0/0:22,1:22:19.35:0,19,557	0/0:22,0:21:60.01:0,60,673	0/0:13,0:13:32.84:0,33,320
chr10	22835476	.	TC	T	2875.10	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=3.472;DP=629;FS=1.310;HRun=6;HaplotypeScore=122.1270;InbreedingCoeff=0.9793;MQ=61.39;MQ0=6;MQRankSum=3.196;QD=23.37;ReadPosRankSum=2.475;VQSLOD=2.2162;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:81.14:0,81,1007	1/1:0,5:5:12.03:129,12,0	0/0:38,0:29:53.13:0,53,701	0/0:39,0:21:16.46:0,16,435	0/0:23,0:23:10.24:0,10,544	0/0:15,0:15:42.13:0,42,539	0/0:24,0:22:59.91:0,60,762	0/0:32,0:27:66.20:0,66,855	1/1:0,22:22:63.16:677,63,0	0/0:25,0:25:72.23:0,72,933	0/0:21,0:20:42.14:0,42,554	0/0:27,0:26:66.16:0,66,833	0/0:22,0:22:63.66:0,64,811	0/0:20,0:20:57.13:0,57,713	0/0:27,0:27:73.44:0,73,931	0/0:29,2:30:22.74:0,23,975	1/1:6,20:26:57.14:611,57,0	1/1:0,9:10:29.81:302,30,0	1/1:6,18:19:45.11:483,45,0	1/1:2,14:15:42.10:451,42,0	1/1:4,16:20:39.10:419,39,0	0/0:19,0:18:16.80:0,17,447	0/0:10,0:10:16.95:0,17,227	0/0:27,0:27:72.15:0,72,906	0/0:12,0:10:27.09:0,27,355	0/0:22,0:20:60.19:0,60,784	0/0:24,0:23:40.27:0,40,755	0/0:14,0:13:27.09:0,27,355
chr10	22835540	.	CTG	C	2764.09	PASS	AB=1.000;AC=40;AF=0.714;AN=56;BaseQRankSum=0.848;DP=589;FS=8.467;HRun=0;HaplotypeScore=188.2991;InbreedingCoeff=0.2294;MQ=45.76;MQ0=16;MQRankSum=-2.706;QD=5.34;ReadPosRankSum=-3.458;VQSLOD=1.3200;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:35,0:33:10.39:67,10,0	1/1:9,0:9:15.34:117,15,0	0/1:23,0:11:3.89:4,0,116	0/1:35,0:11:24.86:25,0,87	0/0:20,0:16:8.28:0,8,98	0/1:17,0:17:7.33:33,0,7	0/1:20,0:18:5.21:28,0,5	1/1:31,0:21:41.20:263,41,0	1/1:21,1:22:12.65:239,13,0	0/1:18,0:16:47.23:139,0,47	0/0:16,0:14:8.55:0,9,46	1/1:30,0:29:17.18:195,17,0	1/1:17,0:17:28.04:203,28,0	1/1:21,0:21:27.09:191,27,0	0/1:20,0:19:0.10:0,0,448	0/1:23,0:23:6.81:7,0,660	1/1:34,1:35:15.60:319,16,0	0/0:12,0:10:1.36:0,1,15	1/1:22,1:19:36.80:321,37,0	1/1:22,2:24:12.23:160,12,0	1/1:11,0:10:8.60:62,9,0	1/1:14,0:13:1.64:22,2,0	1/1:22,1:21:4.23:47,4,0	0/0:22,0:23:0.61:0,1,2	1/1:12,0:12:12.21:81,12,0	0/1:29,0:24:1.36:209,0,1	1/1:21,0:20:5.73:158,6,0	1/1:4,0:4:3.46:25,3,0
chr10	22835542	.	G	GTCTC	3509.79	PASS	AB=0.984;AC=41;AF=0.732;AN=56;BaseQRankSum=1.079;DP=580;FS=4.700;HRun=0;HaplotypeScore=208.5407;InbreedingCoeff=0.3084;MQ=46.37;MQ0=16;MQRankSum=-1.961;QD=7.50;ReadPosRankSum=-2.221;VQSLOD=2.2443;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:35,0:33:2.44:105,2,0	1/1:8,2:10:5.69:133,6,0	0/0:21,0:9:11.06:0,11,134	0/0:33,0:12:13.04:0,13,179	1/1:18,0:14:3.13:25,3,0	0/1:17,0:17:9.41:48,0,9	0/1:21,0:19:41.21:57,0,41	1/1:29,0:19:25.79:256,26,0	0/1:21,2:23:23.24:255,0,23	1/1:18,0:16:19.26:114,19,0	0/0:17,0:15:2.34:0,2,12	1/1:30,0:30:0.92:241,1,0	1/1:18,0:18:7.47:120,7,0	1/1:22,0:22:20.04:136,20,0	0/0:20,0:19:50.10:0,50,734	0/0:20,0:20:27.72:0,28,678	1/1:33,3:36:15.75:553,16,0	1/1:3,9:11:6.02:114,6,0	1/1:23,0:19:9.93:346,10,0	1/1:23,1:24:18.75:261,19,0	1/1:11,0:10:8.92:105,9,0	1/1:12,0:11:5.79:54,6,0	1/1:23,0:21:4.47:37,4,0	0/1:23,0:23:26.66:39,0,27	1/1:10,0:10:10.24:109,10,0	1/1:29,0:24:1.58:269,2,0	0/1:20,0:19:1.99:108,0,2	1/1:3,0:3:2.99:24,3,0
chr10	22835544	.	CTCTG	C	763.23	PASS	AB=0.991;AC=21;AF=0.375;AN=56;BaseQRankSum=-0.315;DP=586;FS=7.458;HRun=0;HaplotypeScore=211.8789;InbreedingCoeff=0.0043;MQ=47.72;MQ0=14;MQRankSum=2.710;QD=2.18;ReadPosRankSum=-2.855;VQSLOD=1.1033;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:36,0:34:18.97:32,0,19	0/0:10,0:10:16.30:0,16,87	0/1:23,0:11:27.88:28,0,215	0/1:32,0:14:14.15:14,0,263	1/1:17,1:14:6.92:36,7,0	0/1:18,0:18:11.69:12,0,54	0/0:22,0:20:8.99:0,9,97	0/1:27,2:19:32.12:115,0,32	0/0:25,0:25:33.10:0,33,252	1/1:19,0:17:10.41:229,10,0	1/1:16,1:15:7.93:125,8,0	0/1:29,0:29:54.77:55,0,106	0/0:18,0:18:3.32:0,3,126	0/1:22,0:22:34.28:37,0,34	0/0:20,0:19:49.92:0,50,1044	0/0:20,0:20:50.99:0,51,1112	0/0:36,0:36:23.08:0,23,463	0/0:13,0:11:2.92:0,3,35	0/1:25,0:21:23.12:23,0,201	0/0:24,0:24:30.58:0,31,165	0/1:10,0:10:9.25:9,0,20	1/1:11,0:10:4.59:30,5,0	0/0:21,0:19:0.78:0,1,19	0/0:24,0:24:8.88:0,9,80	1/1:10,0:10:9.98:71,10,0	0/1:28,0:23:79.88:80,0,260	0/1:22,0:21:36.50:36,0,168	0/0:3,0:3:1.83:0,2,49
chr10	22835548	.	GTC	G	229.21	PASS	AB=0.966;AC=13;AF=0.232;AN=56;BaseQRankSum=2.347;DP=592;FS=25.851;HRun=0;HaplotypeScore=205.5840;InbreedingCoeff=-0.0539;MQ=47.88;MQ0=13;MQRankSum=-0.084;QD=1.02;ReadPosRankSum=1.742;VQSLOD=0.9898;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,1:34:7.58:0,8,50	0/1:10,1:11:4.23:4,0,189	0/0:26,0:11:13.73:0,14,271	0/0:33,0:15:15.04:0,15,352	0/0:18,0:14:5.27:0,5,47	0/0:16,0:16:7.57:0,8,27	0/1:22,0:21:11.78:12,0,35	0/0:29,0:19:12.60:0,13,111	0/1:22,2:24:34.03:34,0,366	0/1:17,0:15:4.52:5,0,30	1/1:19,0:15:2.98:12,3,0	0/0:27,1:28:22.04:0,22,126	0/0:19,0:19:13.47:0,13,121	0/0:20,1:21:17.84:0,18,102	0/0:22,0:21:45.49:0,45,756	0/0:19,0:19:45.15:0,45,744	0/1:33,2:35:96.36:96,0,628	0/1:14,0:12:7.45:7,0,76	0/1:18,1:17:99:104,0,313	0/1:23,1:24:46.84:47,0,201	0/0:11,0:11:7.27:0,7,115	1/1:12,1:12:2.71:29,3,0	0/0:21,0:19:4.65:0,5,24	0/1:26,0:26:9:17,0,9	0/0:13,0:13:0.30:0,0,14	0/0:31,0:26:20.45:0,20,185	0/0:22,0:21:2.82:0,3,63	0/0:2,0:2:4.30:0,4,16
chr10	22835575	.	C	CGT	6582.89	PASS	AB=0.807;AC=35;AF=0.625;AN=56;BaseQRankSum=5.450;DP=595;FS=0.000;HRun=0;HaplotypeScore=163.1741;InbreedingCoeff=0.5920;MQ=55.05;MQ0=14;MQRankSum=-2.952;QD=16.02;ReadPosRankSum=-2.352;VQSLOD=4.0451;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,21:23:23.96:383,24,0	0/1:10,0:11:17.68:18,0,240	0/1:45,0:18:11.33:11,0,115	0/0:42,0:25:16.14:0,16,211	1/1:14,0:17:19.84:107,20,0	1/1:4,18:21:29.77:445,30,0	1/1:10,16:24:5.98:579,6,0	1/1:12,8:20:27.04:357,27,0	0/1:18,1:19:3.17:3,0,442	1/1:13,0:19:35.45:314,35,0	1/1:14,0:14:10:76,10,0	1/1:5,18:23:8.31:579,8,0	1/1:5,13:18:36.12:577,36,0	0/1:2,14:16:6.03:403,0,6	0/0:18,0:19:38.89:0,39,405	0/0:22,0:22:53.38:0,53,621	0/0:32,0:33:71.79:0,72,841	0/0:11,0:10:3.01:0,3,36	0/0:20,0:15:27.08:0,27,324	0/0:21,0:22:60:0,60,701	0/0:14,0:14:26.98:0,27,323	1/1:8,9:15:27.04:411,27,0	1/1:10,14:22:39.13:609,39,0	1/1:3,14:18:18.06:289,18,0	0/1:2,9:11:21.08:177,0,21	1/1:18,15:28:53.60:800,54,0	1/1:11,9:19:22.79:362,23,0	1/1:1,1:2:6.02:83,6,0
chr10	22835594	.	A	ATG	1598.84	PASS	AB=0.981;AC=17;AF=0.304;AN=56;BaseQRankSum=7.993;DP=636;FS=0.453;HRun=0;HaplotypeScore=167.4799;InbreedingCoeff=-0.0895;MQ=53.39;MQ0=16;MQRankSum=-5.728;QD=4.67;ReadPosRankSum=1.249;VQSLOD=3.1615;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:32,0:31:34.29:34,0,89	0/0:13,0:14:34.49:0,34,383	0/0:48,0:19:34.34:0,34,366	0/0:38,0:26:48.86:0,49,466	0/1:16,8:22:18.32:400,0,18	0/1:25,0:24:7.43:7,0,94	0/1:28,0:27:15.75:16,0,148	0/0:18,0:17:12.57:0,13,253	0/0:19,0:19:48.62:0,49,595	1/1:6,17:23:50.65:686,51,0	1/1:15,7:17:20.83:298,21,0	0/1:24,0:24:57.58:58,0,68	0/1:20,0:20:36.28:36,0,139	0/1:17,0:17:56.04:56,0,56	0/0:15,0:15:39.10:0,39,454	0/0:24,0:24:57.18:0,57,704	0/0:36,0:36:80.97:0,81,977	0/0:16,0:15:18.06:0,18,220	0/0:16,0:13:27.08:0,27,333	0/0:26,0:26:72.21:0,72,880	0/0:18,0:18:35.88:0,36,431	0/1:18,0:17:38.12:38,0,113	0/1:24,0:22:52.86:53,0,62	0/1:22,0:21:13.01:13,0,96	0/1:11,0:11:25.53:26,0,27	0/1:28,0:27:41.83:42,0,190	0/1:23,0:22:1.93:2,0,172	0/0:4,0:4:1.63:0,2,20
chr10	22835906	.	TCAAA	T	11947.40	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=15.340;DP=676;FS=6.942;HRun=0;HaplotypeScore=115.8735;InbreedingCoeff=0.9937;MQ=69.18;MQ0=0;MQRankSum=-2.770;QD=33.85;ReadPosRankSum=2.122;VQSLOD=4.7971;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,24:32:11.32:943,11,0	0/0:10,0:10:27.05:0,27,617	0/0:22,0:20:30.07:0,30,596	0/0:24,0:20:24:0,24,569	0/0:28,0:28:63.22:0,63,1515	1/1:2,26:28:63.22:1063,63,0	1/1:6,11:17:33.11:557,33,0	1/1:15,21:36:63.15:973,63,0	0/0:16,0:16:48.16:0,48,1188	0/0:34,0:34:87.30:0,87,2158	0/0:20,0:20:51.18:0,51,1239	1/1:2,15:17:39.13:658,39,0	1/1:7,20:27:57.19:946,57,0	1/1:10,16:26:45.04:726,45,0	0/0:33,0:33:84.29:0,84,2034	0/0:28,0:28:66.23:0,66,1643	0/0:22,0:21:51.17:0,51,1172	0/0:11,0:11:24.08:0,24,565	0/0:26,0:26:60.21:0,60,1447	0/0:29,0:29:63.22:0,63,1540	0/0:20,0:20:48.16:0,48,1180	1/1:3,24:27:72.14:1180,72,0	1/1:9,14:23:33.11:557,33,0	1/1:7,21:28:51.17:860,51,0	1/1:3,18:21:48.16:810,48,0	1/1:4,15:19:45.15:751,45,0	1/1:7,37:43:93.32:1568,93,0	1/1:1,7:8:21.07:354,21,0
chr10	22836830	.	GGTGT	G	1398.42	PASS	AB=0.848;AC=19;AF=0.380;AN=50;BaseQRankSum=0.865;DP=572;FS=0.000;HRun=0;HaplotypeScore=101.6429;InbreedingCoeff=0.4373;MQ=65.88;MQ0=9;MQRankSum=1.323;QD=5.85;ReadPosRankSum=2.532;VQSLOD=2.0712;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:24,11:35:6.02:93,6,0	0/0:9,0:9:15.05:0,15,264	./.	./.	0/0:24,0:31:29.84:0,30,497	0/1:12,1:16:28.16:65,0,28	0/1:17,1:18:24.97:41,0,25	0/0:25,0:25:3.40:0,3,18	0/0:16,0:23:18.06:0,18,290	0/0:19,0:19:21.06:0,21,289	0/0:4,0:8:9.03:0,9,152	0/1:16,0:18:6.43:19,0,6	0/1:14,2:18:0.39:109,0,0	1/1:14,5:20:19.30:262,19,0	0/0:23,0:24:26.82:0,27,429	0/0:14,0:16:3.46:0,3,483	0/0:19,0:31:18.06:0,18,299	0/0:10,0:15:5.98:0,6,72	0/0:35,0:33:21.06:0,21,316	0/0:11,0:17:9.03:0,9,167	0/0:21,0:18:3.01:0,3,52	1/1:8,2:10:6.02:93,6,0	1/1:14,0:14:6.02:89,6,0	1/1:18,5:24:14.63:333,15,0	1/1:11,10:22:21.06:300,21,0	0/1:20,6:24:52.41:125,0,52	1/1:15,1:16:3.01:39,3,0	./.
chr10	22836979	.	A	AT	614.97	PASS	AB=0.926;AC=6;AF=0.107;AN=56;BaseQRankSum=-1.431;DP=463;FS=21.971;HRun=10;HaplotypeScore=53.0045;InbreedingCoeff=0.5672;MQ=85.53;MQ0=1;MQRankSum=-0.267;QD=10.60;ReadPosRankSum=0.678;VQSLOD=0.8573;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:54.36:0,54,445	0/0:2,0:2:5.99:0,6,49	0/0:18,0:18:3.06:0,3,67	0/0:15,0:15:19.68:0,20,125	0/0:17,0:17:41.92:0,42,345	0/0:21,0:21:59.84:0,60,484	0/0:17,0:17:41.94:0,42,344	0/0:19,0:19:44.92:0,45,367	0/0:11,0:11:23.95:0,24,197	0/0:20,0:20:50.92:0,51,419	0/0:13,0:14:25.97:0,26,202	0/0:10,0:10:20.96:0,21,172	0/0:14,0:14:32.93:0,33,271	0/0:13,0:13:26.94:0,27,222	0/1:11,1:12:5.03:5,0,170	0/0:14,0:14:35.95:0,36,296	0/0:29,0:29:71.88:0,72,591	0/1:12,1:12:8.03:8,0,148	0/0:24,0:25:64:0,64,504	0/0:22,0:22:53.88:0,54,439	0/0:15,0:15:29.95:0,30,245	0/0:12,0:12:26.94:0,27,219	1/1:3,15:20:48.67:478,49,0	1/1:1,10:13:26.73:252,27,0	0/0:17,0:17:47.94:0,48,394	0/0:21,0:21:47.89:0,48,392	0/0:17,0:16:47.94:0,48,394	0/0:17,1:18:3.92:0,4,239
chr10	22837068	.	GTGTC	G	2588.95	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.229;DP=477;FS=11.955;HRun=0;HaplotypeScore=77.3307;InbreedingCoeff=0.9989;MQ=86.80;MQ0=0;MQRankSum=-3.353;QD=46.23;ReadPosRankSum=1.546;VQSLOD=3.8586;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:78.27:0,78,2136	0/0:11,0:11:33.10:0,33,847	0/0:13,0:13:33.11:0,33,855	0/0:20,0:20:51.17:0,51,1330	1/1:3,22:25:60.18:1162,60,0	0/0:14,0:14:42.14:0,42,1150	0/0:16,0:16:42.14:0,42,1109	0/0:24,0:24:69.24:0,69,1890	0/0:13,0:13:33.11:0,33,903	1/1:1,9:10:27.09:523,27,0	1/1:1,20:21:54.19:1046,54,0	0/0:17,0:17:51.18:0,51,1396	0/0:17,0:17:51.18:0,51,1395	0/0:10,0:10:30.10:0,30,807	0/0:15,0:15:45.15:0,45,1233	0/0:16,0:16:48.16:0,48,1315	0/0:25,0:24:72.25:0,72,1972	0/0:17,0:17:51.17:0,51,1323	0/0:23,0:23:66.20:0,66,1695	0/0:16,0:16:45.14:0,45,1162	0/0:18,0:18:51.16:0,51,1340	0/0:15,0:15:42.14:0,42,1150	0/0:12,0:12:36.08:0,36,924	0/0:15,0:15:45.14:0,45,1174	0/0:17,0:17:48.16:0,48,1315	0/0:19,0:19:54.19:0,54,1479	0/0:21,0:21:63.22:0,63,1720	0/0:10,0:10:30.10:0,30,822
chr10	22837494	.	TC	T	2049.75	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=-0.765;DP=597;FS=0.000;HRun=1;HaplotypeScore=121.5773;InbreedingCoeff=0.7539;MQ=68.54;MQ0=11;MQRankSum=-1.959;QD=10.57;ReadPosRankSum=-5.008;VQSLOD=-0.3942;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:22.49:0,22,139	1/1:9,0:9:19.61:152,20,0	0/1:51,0:19:4.97:5,0,86	0/0:30,0:20:24.37:0,24,171	0/0:27,0:27:63.10:0,63,611	0/0:20,0:20:30.90:0,31,164	0/0:10,0:10:24.05:0,24,100	0/0:32,0:32:35.76:0,36,288	1/1:9,2:11:29.49:236,29,0	0/0:21,0:21:55.68:0,56,484	0/0:28,0:28:51.79:0,52,607	0/0:15,0:15:9.61:0,10,65	0/0:25,0:25:22.24:0,22,211	0/0:27,0:27:3.51:0,4,139	0/0:28,0:28:58.05:0,58,649	0/0:17,0:17:47.97:0,48,498	1/1:25,2:27:77.26:596,77,0	1/1:17,1:18:35.40:303,35,0	1/1:8,4:12:35.53:333,36,0	1/1:23,1:24:68.53:494,69,0	1/1:2,2:4:11.98:115,12,0	0/1:20,0:20:7.56:8,0,125	0/0:18,0:18:12.17:0,12,83	0/0:15,0:15:15.15:0,15,83	0/0:24,1:25:33.33:0,33,230	0/0:24,0:24:27.85:0,28,203	0/1:18,0:18:3.38:3,0,53	0/0:20,0:20:22.42:0,22,150
chr10	22837495	.	CTT	C	6324.79	PASS	AB=0.981;AC=41;AF=0.732;AN=56;BaseQRankSum=5.596;DP=598;FS=9.608;HRun=13;HaplotypeScore=118.8010;InbreedingCoeff=0.6694;MQ=67.80;MQ0=11;MQRankSum=0.697;QD=14.15;ReadPosRankSum=3.007;VQSLOD=2.9978;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,19:20:48.03:452,48,0	1/1:7,2:9:9.74:99,10,0	0/1:51,1:19:3.96:4,0,197	0/0:33,0:21:20.04:0,20,211	0/0:28,0:28:66.69:0,67,599	1/1:3,17:20:45.05:435,45,0	1/1:3,8:11:20.70:219,21,0	1/1:8,24:32:71.84:668,72,0	1/1:11,0:11:4.65:54,5,0	0/0:21,0:21:45.85:0,46,422	0/0:27,0:27:33.22:0,33,515	1/1:1,14:15:27.03:261,27,0	1/1:7,18:25:51.93:494,52,0	1/1:4,23:27:28.24:466,28,0	0/0:26,0:26:71.70:0,72,954	0/0:16,0:16:48.16:0,48,693	1/1:27,0:27:8.50:36,9,0	0/1:18,0:18:22.77:23,0,26	1/1:11,1:12:9.70:58,10,0	0/1:25,1:26:24.47:162,0,24	1/1:4,0:4:7.98:61,8,0	1/1:4,16:20:44.94:421,45,0	1/1:0,17:18:48:452,48,0	1/1:2,13:15:27.93:263,28,0	1/1:8,16:24:45:434,45,0	1/1:3,20:23:57.06:550,57,0	1/1:0,18:18:42.01:399,42,0	1/1:3,17:20:1.79:313,2,0
chr10	22837768	.	T	TAAA	763.90	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-3.923;DP=562;FS=1.989;HRun=9;HaplotypeScore=78.7265;InbreedingCoeff=0.9390;MQ=77.28;MQ0=0;MQRankSum=-2.138;QD=31.83;ReadPosRankSum=-0.379;VQSLOD=2.7969;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:34:99:0,102,1269	0/0:9,0:9:24.06:0,24,289	0/0:8,0:9:16.79:0,17,160	0/0:18,0:19:30.58:0,31,396	0/0:26,0:26:72.18:0,72,895	0/0:18,0:18:51.16:0,51,644	0/0:18,0:18:48.14:0,48,607	0/0:28,0:28:60.07:0,60,742	0/0:15,0:15:42.11:0,42,531	0/0:28,0:28:78.22:0,78,973	0/0:26,0:26:78.25:0,78,986	0/0:15,0:15:45.14:0,45,569	0/0:18,0:18:48.12:0,48,592	0/0:20,0:21:60.11:0,60,737	0/0:14,0:14:39.12:0,39,492	1/1:7,16:23:10.25:848,10,0	0/0:30,0:30:87.24:0,87,1084	0/0:11,0:11:27.08:0,27,341	0/0:18,0:18:42.11:0,42,530	0/0:17,0:17:48.13:0,48,606	0/0:13,0:13:33.07:0,33,400	0/0:16,0:16:39.11:0,39,493	0/0:24,0:24:66.17:0,66,821	0/0:21,0:21:54.16:0,54,682	0/0:23,0:23:66.19:0,66,832	0/0:24,0:24:66.17:0,66,822	0/0:26,0:28:69.10:0,69,822	0/0:15,0:15:45.14:0,45,568
chr10	22839183	.	CA	C	2527.79	PASS	AB=0.917;AC=7;AF=0.125;AN=56;BaseQRankSum=9.884;DP=820;FS=7.629;HRun=2;HaplotypeScore=78.1585;InbreedingCoeff=0.8361;MQ=86.26;MQ0=0;MQRankSum=-1.894;QD=22.98;ReadPosRankSum=0.172;VQSLOD=2.8995;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:57:99:0,172,2546	0/0:10,0:10:30.09:0,30,430	0/0:25,0:25:75.22:0,75,1071	0/0:30,0:30:75.23:0,75,1083	1/1:0,33:33:87.22:1108,87,0	0/0:23,0:23:66.22:0,66,989	0/0:28,0:28:84.28:0,84,1253	0/0:27,0:27:81.25:0,81,1157	0/0:21,0:21:63.21:0,63,944	1/1:0,25:25:75.24:961,75,0	1/1:1,18:19:45.15:584,45,0	0/0:32,0:32:93.31:0,93,1375	0/0:39,0:39:99:0,117,1692	0/0:39,0:39:99:0,111,1623	0/0:41,0:41:99:0,123,1843	0/0:33,0:33:96.30:0,96,1399	0/0:24,0:24:66.19:0,66,959	0/0:18,0:18:51.17:0,51,764	0/0:19,0:19:51.17:0,51,753	0/0:48,0:48:99:0,144,2098	0/0:37,0:37:99:0,108,1602	0/0:26,0:26:78.25:0,78,1149	0/0:31,0:31:90.29:0,90,1326	0/0:36,0:36:99:0,108,1574	0/0:28,0:28:84.27:0,84,1224	0/1:30,3:33:23.57:24,0,1166	0/0:29,0:28:87.29:0,87,1297	0/0:9,0:9:21.07:0,21,315
chr10	22839678	.	AT	A	2427.56	PASS	AB=0.888;AC=8;AF=0.143;AN=56;BaseQRankSum=5.938;DP=617;FS=3.454;HRun=9;HaplotypeScore=73.2927;InbreedingCoeff=0.7382;MQ=79.99;MQ0=0;MQRankSum=-2.753;QD=17.98;ReadPosRankSum=1.067;VQSLOD=3.9408;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,1:19:29.69:0,30,585	0/1:8,1:9:3.79:4,0,107	0/0:19,0:19:28.46:0,28,393	0/0:13,0:13:26.46:0,26,243	1/1:1,28:29:78.03:714,78,0	0/0:33,0:33:96.28:0,96,1100	0/0:16,1:17:14.66:0,15,422	0/0:19,2:21:26.69:0,27,561	0/0:20,0:20:44.31:0,44,287	1/1:3,34:37:99:929,102,0	1/1:1,38:39:99:906,99,0	0/0:18,0:18:48.11:0,48,533	0/0:22,0:22:57.13:0,57,627	0/0:18,0:18:54.16:0,54,623	0/0:24,0:24:63.19:0,63,727	0/0:26,1:28:53.59:0,54,843	0/0:21,0:21:34:0,34,307	0/0:13,0:13:35.52:0,36,233	0/0:21,0:21:35.19:0,35,315	0/0:21,0:21:53.44:0,53,368	0/0:14,0:14:41.40:0,41,269	0/0:25,1:26:50.76:0,51,838	0/0:23,0:23:60.16:0,60,681	0/1:18,3:21:25.23:25,0,497	0/0:21,0:21:60.15:0,60,671	0/0:32,2:34:41.33:0,41,965	0/0:28,0:27:75.19:0,75,843	0/0:8,0:8:24.07:0,24,277
chr10	22839747	.	TC	T	4785.53	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=11.224;DP=669;FS=0.000;HRun=2;HaplotypeScore=69.1498;InbreedingCoeff=0.9998;MQ=90.49;MQ0=0;MQRankSum=-2.981;QD=36.25;ReadPosRankSum=1.435;VQSLOD=5.3884;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:54.18:0,54,809	1/1:0,9:9:27.09:350,27,0	0/0:29,0:29:87.27:0,87,1231	0/0:23,0:23:69.21:0,69,1012	0/0:41,0:41:99:0,117,1712	0/0:41,0:41:99:0,123,1821	0/0:19,0:19:54.17:0,54,790	0/0:26,0:26:72.24:0,72,1062	1/1:1,25:26:75.24:973,75,0	0/0:32,0:32:96.30:0,96,1363	0/0:26,0:26:78.25:0,78,1148	0/0:18,0:18:54.18:0,54,809	0/0:28,0:28:81.27:0,81,1201	0/0:22,0:22:63.20:0,63,925	0/0:27,0:27:81.27:0,81,1212	0/0:25,0:25:75.24:0,75,1103	1/1:0,16:16:45.07:547,45,0	1/1:0,12:12:36.12:467,36,0	1/1:0,23:23:69.20:872,69,0	1/1:0,23:23:54.12:681,54,0	1/1:0,23:23:69.22:895,69,0	0/0:22,0:22:63.20:0,63,924	0/0:23,0:23:66.22:0,66,986	0/0:18,0:18:54.18:0,54,809	0/0:23,0:23:66.21:0,66,970	0/0:23,0:23:69.23:0,69,1034	0/0:39,0:39:99:0,111,1602	0/0:13,0:13:39.13:0,39,584
chr10	22842026	.	CCA	C	223.53	PASS	AB=0.989;AC=23;AF=0.605;AN=38;BaseQRankSum=0.151;DP=425;FS=8.787;HRun=0;HaplotypeScore=57.4768;InbreedingCoeff=0.2519;MQ=60.77;MQ0=20;MQRankSum=-0.189;QD=1.04;ReadPosRankSum=-0.378;VQSLOD=0.3485;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:24:0:0,0,0	./.	./.	./.	0/0:15,0:14:2.37:0,2,8	1/1:19,5:24:3:31,3,0	1/1:18,0:18:3:31,3,0	./.	1/1:8,0:8:2.84:14,3,0	0/0:14,0:14:6.01:0,6,68	0/0:11,0:10:6.02:0,6,82	1/1:16,0:16:6.01:62,6,0	1/1:9,0:12:2.82:14,3,0	1/1:7,0:7:2.83:14,3,0	0/0:11,0:11:11.91:0,12,86	0/1:14,0:14:48.47:79,0,48	1/1:24,0:25:1.95:13,2,0	1/1:17,0:15:1.02:5,1,0	./.	./.	1/1:24,0:22:2.04:6,2,0	./.	0/1:6,0:6:0:0,0,0	0/1:27,1:28:10.15:54,0,10	1/1:11,0:11:2.84:14,3,0	./.	./.	0/0:6,0:6:2.90:0,3,16
chr10	22842315	.	CATTT	C	1639.69	PASS	AB=0.762;AC=41;AF=0.891;AN=46;BaseQRankSum=2.517;DP=310;FS=0.000;HRun=0;HaplotypeScore=50.6972;InbreedingCoeff=0.2888;MQ=71.54;MQ0=0;MQRankSum=0.373;QD=6.10;ReadPosRankSum=-0.431;VQSLOD=1.4007;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:13,7:20:6.02:84,6,0	1/1:4,0:6:5.98:49,6,0	./.	./.	1/1:4,6:10:14.98:204,15,0	1/1:7,12:19:15.05:212,15,0	1/1:6,0:6:1.73:23,2,0	1/1:28,0:28:2.97:20,3,0	1/1:12,0:12:8.53:54,9,0	./.	1/1:1,5:6:14.96:175,15,0	1/1:7,0:7:3:25,3,0	1/1:4,1:5:3.01:46,3,0	1/1:9,3:12:6.02:91,6,0	0/0:4,0:4:6.01:0,6,99	0/0:11,0:11:18.04:0,18,313	1/1:17,0:24:2.92:17,3,0	0/1:11,0:16:14.96:22,0,15	1/1:22,0:25:8.97:76,9,0	1/1:6,0:13:11.90:105,12,0	1/1:6,0:6:2.90:16,3,0	1/1:2,1:3:3.01:46,3,0	./.	./.	1/1:14,0:14:6.01:63,6,0	1/1:9,4:13:12.03:164,12,0	1/1:10,1:12:11.96:128,12,0	1/1:5,7:12:9.03:139,9,0
chr10	22843566	.	T	TA	14943.14	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-8.813;DP=446;FS=2.735;HRun=3;HaplotypeScore=35.9704;InbreedingCoeff=0.8762;MQ=76.92;MQ0=0;MQRankSum=-1.343;QD=37.74;ReadPosRankSum=0.617;VQSLOD=4.7357;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,11:12:33.11:462,33,0	1/1:0,8:8:24.08:336,24,0	0/0:12,0:12:5.62:0,6,325	0/0:5,0:5:12.04:0,12,143	1/1:0,24:24:72.20:986,72,0	1/1:0,18:18:48.16:672,48,0	1/1:0,14:14:36.12:498,36,0	1/1:2,38:40:99:1491,114,0	1/1:0,5:5:15.05:209,15,0	1/1:3,25:28:75.23:1032,75,0	1/1:2,18:21:54.18:747,54,0	1/1:1,11:12:27.09:378,27,0	1/1:0,17:17:48.16:672,48,0	1/1:1,20:21:54.18:756,54,0	0/0:19,0:19:54.17:0,54,648	0/0:14,0:14:42.13:0,42,504	1/1:0,15:15:45.15:623,45,0	1/1:0,11:11:33.11:462,33,0	1/1:0,22:22:66.22:924,66,0	1/1:3,25:28:75.18:1026,75,0	1/1:0,10:10:27.09:378,27,0	1/1:1,5:6:15.05:210,15,0	1/1:3,13:16:39.13:546,39,0	1/1:0,3:3:6.02:84,6,0	1/1:1,17:17:45.15:624,45,0	1/1:0,22:22:66.22:920,66,0	1/1:1,23:24:63.19:864,63,0	1/1:0,1:1:3.01:42,3,0
chr10	22844044	.	GA	G	2881.10	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=10.936;DP=548;FS=12.209;HRun=8;HaplotypeScore=54.8216;InbreedingCoeff=0.9698;MQ=77.95;MQ0=0;MQRankSum=1.316;QD=24.21;ReadPosRankSum=-0.583;VQSLOD=3.2419;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:51.16:0,51,616	0/0:5,0:5:12.04:0,12,145	0/0:14,0:13:26.07:0,26,284	0/0:13,0:12:25.43:0,25,284	1/1:1,29:30:78.12:753,78,0	0/0:32,0:31:84.26:0,84,1014	0/0:12,0:12:33.09:0,33,388	1/1:4,35:39:99:1013,105,0	0/0:17,0:17:48.15:0,48,579	1/1:2,22:24:66.11:637,66,0	1/1:3,23:26:66.10:637,66,0	0/0:15,0:15:39.11:0,39,460	0/0:22,0:22:57.17:0,57,679	0/0:9,0:9:24.06:0,24,278	0/0:21,0:21:60.16:0,60,702	0/0:16,0:16:42.13:0,42,507	0/0:29,0:28:78.24:0,78,940	0/0:16,0:16:42.07:0,42,474	0/0:22,0:22:57.17:0,57,688	0/0:28,0:28:72.21:0,72,855	0/0:4,0:4:9.03:0,9,108	0/0:16,0:16:39.12:0,39,471	0/0:23,0:23:66.20:0,66,797	0/0:6,0:6:15.05:0,15,181	0/0:28,0:28:78.19:0,78,906	0/0:27,0:27:78.24:0,78,942	0/0:19,0:19:51.16:0,51,616	0/0:10,0:10:30.09:0,30,362
chr10	22844340	.	TAA	T	4316.34	PASS	AB=0.636;AC=35;AF=0.625;AN=56;BaseQRankSum=7.651;DP=615;FS=6.170;HRun=16;HaplotypeScore=108.6570;InbreedingCoeff=0.8714;MQ=71.11;MQ0=3;MQRankSum=-2.188;QD=12.70;ReadPosRankSum=5.193;VQSLOD=3.9142;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,10:17:25.11:204,25,0	1/1:3,0:7:3.75:12,4,0	0/0:52,0:24:40.51:0,41,382	0/0:33,0:19:14.57:0,15,108	0/0:28,0:30:25.28:0,25,498	1/1:6,17:25:49.43:389,49,0	1/1:3,10:13:30.83:252,31,0	1/1:12,12:28:38.35:287,38,0	0/1:9,0:21:5.95:53,0,6	0/0:25,0:26:54.84:0,55,431	0/0:25,0:26:49.52:0,50,390	1/1:9,13:22:31.21:254,31,0	1/1:5,11:16:38.44:303,38,0	1/1:5,11:16:31.23:239,31,0	0/0:21,0:24:59.48:0,59,668	0/0:14,0:16:38.48:0,38,458	1/1:6,0:16:16.85:49,17,0	1/1:4,2:17:0.98:47,1,0	0/0:19,0:22:10.08:0,10,175	0/0:32,0:33:67.08:0,67,622	0/0:11,0:11:17.74:0,18,144	1/1:4,10:15:29.49:237,29,0	1/1:4,16:22:40.43:317,40,0	1/1:4,14:18:29.95:248,30,0	1/1:9,16:26:47.52:387,48,0	1/1:6,20:28:65.22:522,65,0	1/1:6,17:24:43.70:356,44,0	1/1:2,6:9:20.69:162,21,0
chr10	22844356	.	A	AC	6769.18	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=1.211;DP=584;FS=0.467;HRun=1;HaplotypeScore=98.7393;InbreedingCoeff=0.9892;MQ=71.11;MQ0=4;MQRankSum=-1.962;QD=15.01;ReadPosRankSum=3.565;VQSLOD=4.8087;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:14:34.50:212,35,0	1/1:8,0:8:14.88:112,15,0	0/0:55,0:27:51.19:0,51,448	0/0:36,0:20:16.43:0,16,136	1/1:30,1:32:52.74:373,53,0	1/1:24,0:23:56.22:323,56,0	1/1:16,0:16:43.94:282,44,0	1/1:29,0:30:80.85:500,81,0	1/1:16,0:18:44.98:292,45,0	1/1:16,5:21:38.61:353,39,0	1/1:23,1:24:55.37:355,55,0	1/1:20,0:20:49.32:329,49,0	1/1:14,0:15:25.90:178,26,0	1/1:15,0:16:40.69:253,41,0	0/0:24,0:24:67.54:0,68,672	0/0:17,0:17:43.01:0,43,476	1/1:14,0:14:41.11:262,41,0	1/1:16,0:16:37.53:222,38,0	1/1:16,0:16:32.88:277,33,0	1/1:28,1:29:52.63:347,53,0	1/1:7,1:8:21.09:150,21,0	1/1:14,0:14:23.23:217,23,0	1/1:21,0:21:29.15:248,29,0	1/1:16,0:16:34.45:207,34,0	1/1:20,0:20:51.19:330,51,0	1/1:29,0:29:79.84:485,80,0	1/1:21,0:20:51.67:299,52,0	1/1:9,0:9:26.33:164,26,0
chr10	22845430	.	AGTGT	A	9844.05	PASS	AB=0.841;AC=35;AF=0.625;AN=56;BaseQRankSum=0.423;DP=727;FS=1.250;HRun=0;HaplotypeScore=161.7183;InbreedingCoeff=0.7858;MQ=61.10;MQ0=7;MQRankSum=-4.249;QD=20.13;ReadPosRankSum=0.361;VQSLOD=4.6885;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,15:24:24.07:368,24,0	0/0:6,0:9:21.06:0,21,402	0/0:30,0:16:5.85:0,6,74	0/0:38,0:21:11.96:0,12,209	1/1:9,15:26:40.89:593,41,0	1/1:16,25:44:66.20:1007,66,0	1/1:16,13:29:33.08:488,33,0	1/1:22,12:34:18.86:463,19,0	0/0:8,0:24:50.89:0,51,841	1/1:18,13:32:42.58:632,43,0	1/1:9,8:18:27.06:410,27,0	1/1:9,16:27:51.08:774,51,0	1/1:16,16:33:32.48:617,32,0	1/1:9,15:25:32.54:646,33,0	0/0:30,0:35:76.94:0,77,1511	0/1:27,1:27:0.41:0,0,1017	0/1:8,1:19:25.03:25,0,447	0/0:6,0:16:36.12:0,36,602	0/0:13,0:18:27.04:0,27,479	0/0:12,0:25:35.02:0,35,584	0/0:24,0:41:91.74:0,92,1410	1/1:11,11:22:26.96:382,27,0	1/1:8,9:17:21.06:320,21,0	0/1:5,9:14:23.54:362,0,24	1/1:3,18:22:45.15:708,45,0	1/1:8,16:24:51.14:771,51,0	1/1:12,15:26:44.98:695,45,0	1/1:4,13:17:36.12:583,36,0
chr10	22845515	.	CTCTCTCTG	C	5679.10	PASS	AB=1.000;AC=29;AF=0.558;AN=52;BaseQRankSum=-1.674;DP=630;FS=0.000;HRun=0;HaplotypeScore=163.7023;InbreedingCoeff=0.6459;MQ=45.45;MQ0=20;MQRankSum=0.441;QD=14.71;ReadPosRankSum=-2.152;VQSLOD=3.8155;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:21:23.63:291,24,0	0/1:9,0:8:4.06:4,0,71	./.	./.	0/0:38,0:38:19.52:0,20,125	1/1:27,0:26:27.50:306,28,0	1/1:23,0:21:8.27:201,8,0	1/1:27,11:36:68.57:656,69,0	0/1:14,0:13:6.07:6,0,75	0/0:32,0:30:61.93:0,62,683	0/1:21,0:18:8.41:8,0,30	1/1:21,0:21:30.31:454,30,0	1/1:32,0:31:71.59:1029,72,0	1/1:22,0:20:32.93:430,33,0	0/0:31,0:31:69.13:0,69,1788	0/0:32,0:29:73.99:0,74,1607	0/0:17,0:15:17.48:0,17,110	0/0:18,0:17:30.92:0,31,306	0/0:26,0:22:44.18:0,44,363	0/0:20,0:20:18.92:0,19,216	0/0:23,0:22:24.01:0,24,326	1/1:26,0:25:10.50:124,11,0	1/1:24,0:24:14.88:183,15,0	1/1:18,0:18:18.23:376,18,0	0/1:32,0:31:7.72:189,0,8	0/1:26,0:24:20.71:611,0,21	1/1:20,1:19:32.82:530,33,0	1/1:10,0:9:18.04:279,18,0
chr10	22845521	.	CTG	C	2969.75	PASS	AB=0.987;AC=30;AF=0.577;AN=52;BaseQRankSum=3.061;DP=623;FS=4.930;HRun=0;HaplotypeScore=128.8901;InbreedingCoeff=0.1097;MQ=45.37;MQ0=19;MQRankSum=1.069;QD=6.04;ReadPosRankSum=-3.241;VQSLOD=2.2123;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:23:28.14:213,28,0	0/1:11,0:10:17.13:17,0,54	./.	./.	0/1:38,2:40:59.19:59,0,98	1/1:25,0:24:21.50:209,22,0	1/1:22,1:21:19.33:160,19,0	1/1:33,0:30:20.27:320,20,0	0/1:14,1:13:36.64:37,0,72	0/1:30,0:28:24.83:25,0,354	0/1:21,0:18:20.12:38,0,20	1/1:23,1:24:23.08:198,23,0	1/1:32,1:32:50.42:404,50,0	1/1:17,3:18:33.24:257,33,0	0/0:31,0:31:68.99:0,69,1116	0/0:34,0:31:49.86:0,50,1262	0/1:17,0:15:1.40:1,0,85	0/0:17,0:16:4.66:0,5,207	0/0:23,0:21:53.14:0,53,393	0/1:18,1:19:7.08:7,0,118	0/0:24,1:24:4.29:0,4,243	1/1:25,1:25:14.89:139,15,0	0/1:26,0:26:17.50:102,0,18	0/1:18,0:18:3.68:168,0,4	0/1:29,0:28:14.09:162,0,14	0/1:27,0:25:99:332,0,118	0/1:19,0:17:1.29:151,0,1	1/1:12,0:11:19.49:144,19,0
chr10	22845543	.	CTG	C	4012.69	PASS	AB=0.997;AC=39;AF=0.722;AN=54;BaseQRankSum=4.619;DP=633;FS=3.172;HRun=0;HaplotypeScore=139.4359;InbreedingCoeff=-0.0481;MQ=44.28;MQ0=22;MQRankSum=0.026;QD=7.30;ReadPosRankSum=-5.704;VQSLOD=1.9992;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:20,0:19:11.97:62,0,12	1/1:12,0:11:19.67:119,20,0	1/1:5,0:3:1.99:5,2,0	./.	1/1:42,0:42:30.57:272,31,0	0/1:24,0:22:63.49:178,0,63	1/1:28,0:26:15.03:139,15,0	0/1:27,0:24:40.42:203,0,40	1/1:13,0:11:10.79:119,11,0	1/1:28,0:26:52.97:436,53,0	1/1:26,0:23:15.71:163,16,0	1/1:27,2:30:16.94:188,17,0	1/1:33,0:31:21.83:358,22,0	0/1:23,0:21:47.61:154,0,48	0/0:40,0:40:6.34:0,6,800	0/0:33,0:30:72.18:0,72,933	1/1:16,0:14:17.42:106,17,0	1/1:17,0:16:21.31:198,21,0	1/1:6,8:13:14.34:159,14,0	1/1:20,0:20:20.42:161,20,0	0/1:20,0:17:11:40,0,11	0/1:25,0:24:11.26:82,0,11	0/1:15,0:15:31.55:32,0,34	0/1:23,0:22:46.16:168,0,46	0/1:25,0:25:48.64:107,0,49	0/1:27,0:25:54.48:236,0,54	0/1:24,1:23:52:200,0,52	1/1:12,0:10:14.25:129,14,0
chr10	22845545	.	G	GTC	4435.02	PASS	AB=0.975;AC=40;AF=0.741;AN=54;BaseQRankSum=1.554;DP=626;FS=3.910;HRun=0;HaplotypeScore=141.1892;InbreedingCoeff=0.0591;MQ=44.74;MQ0=21;MQRankSum=-1.296;QD=8.31;ReadPosRankSum=-2.441;VQSLOD=4.3296;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:19,1:19:25.12:78,0,25	1/1:12,0:12:5.44:52,5,0	0/0:6,0:4:2.58:0,3,23	./.	0/1:40,0:40:7.52:21,0,8	0/1:24,1:23:40.27:254,0,40	1/1:26,1:25:26.87:353,27,0	0/1:26,0:23:15.90:141,0,16	1/1:14,0:12:8.97:75,9,0	1/1:27,0:26:7.52:81,8,0	0/1:26,0:23:7.74:17,0,8	1/1:28,2:30:32.77:391,33,0	1/1:30,3:32:49.42:508,49,0	0/1:23,0:21:17.84:254,0,18	0/0:36,0:39:17.85:0,18,531	0/0:32,0:33:42.54:0,43,472	1/1:14,0:12:4.70:60,5,0	1/1:14,0:14:1.64:30,2,0	1/1:13,0:12:1.34:19,1,0	1/1:20,0:20:8.09:76,8,0	1/1:18,0:15:2.74:12,3,0	0/1:23,1:23:6.60:316,0,7	1/1:16,1:17:8.99:136,9,0	1/1:20,3:22:0.18:370,0,0	1/1:21,2:23:20.69:388,21,0	1/1:25,1:24:5.40:235,5,0	0/1:22,2:22:6.62:414,0,7	1/1:12,0:10:12.04:154,12,0
chr10	22846021	.	AAC	A	454.85	PASS	AB=0.905;AC=19;AF=0.432;AN=44;BaseQRankSum=4.451;DP=492;FS=3.613;HRun=0;HaplotypeScore=60.7961;InbreedingCoeff=0.2489;MQ=66.30;MQ0=19;MQRankSum=0.630;QD=2.00;ReadPosRankSum=1.309;VQSLOD=1.3589;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:20:11.95:55,0,12	0/0:4,0:4:3.01:0,3,37	./.	./.	0/0:20,0:18:15.03:0,15,192	1/1:12,1:13:6.01:58,6,0	1/1:19,6:25:6.01:64,6,0	./.	0/0:10,0:10:3.01:0,3,44	0/0:15,0:15:1.25:0,1,3	0/1:16,2:18:10.85:11,0,199	./.	./.	1/1:21,0:20:4.56:35,5,0	0/0:15,0:17:14.73:0,15,143	0/1:17,0:18:44.89:45,0,73	0/0:21,0:19:7.27:0,7,91	0/0:14,0:14:12.46:0,12,130	0/0:15,0:15:5.99:0,6,63	./.	0/0:21,0:19:12.03:0,12,145	1/1:16,5:19:6.44:52,6,0	0/1:23,5:28:27.84:55,0,28	1/1:16,1:18:3:32,3,0	0/1:17,1:19:34:34,0,57	0/0:16,0:14:1.32:0,1,3	1/1:11,4:14:9.02:96,9,0	1/1:5,2:7:6.02:64,6,0
chr10	22846207	.	C	CTCTTTCTTTCTT	8428.62	PASS	AB=0.804;AC=46;AF=0.852;AN=54;BaseQRankSum=-0.265;DP=619;FS=0.673;HRun=0;HaplotypeScore=191.0642;InbreedingCoeff=0.3562;MQ=61.38;MQ0=12;MQRankSum=-4.993;QD=15.61;ReadPosRankSum=-3.022;VQSLOD=3.4166;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:12,0:11:14.55:294,15,0	1/1:4,0:4:3.01:50,3,0	./.	0/1:40,0:18:0:0,0,0	0/1:9,0:26:71.04:90,0,71	1/1:20,0:20:18.06:418,18,0	1/1:19,0:19:17.99:241,18,0	1/1:35,0:32:26.23:356,26,0	1/1:7,0:15:3.01:77,3,0	0/1:11,0:25:13.50:14,0,48	0/1:26,0:25:44.21:44,0,60	1/1:22,0:20:27.07:593,27,0	1/1:26,0:24:48.14:932,48,0	1/1:11,8:27:6.02:233,6,0	0/0:24,0:24:21.03:0,21,457	0/0:15,0:15:23.23:0,23,732	1/1:19,0:19:20.99:343,21,0	1/1:11,0:11:2.97:20,3,0	1/1:19,0:17:24.07:458,24,0	1/1:10,0:20:15.84:166,16,0	1/1:11,0:11:11.92:98,12,0	1/1:21,0:21:27.02:686,27,0	1/1:34,0:34:34.02:645,34,0	1/1:28,0:28:43.02:952,43,0	1/1:9,9:23:3.01:171,3,0	1/1:18,0:18:30.07:863,30,0	1/1:21,0:20:30.08:493,30,0	1/1:6,7:15:5.95:192,6,0
chr10	22846244	.	TCTTCCTTCCTTC	T	2278.66	PASS	AB=0.954;AC=18;AF=0.333;AN=54;BaseQRankSum=6.735;DP=521;FS=11.153;HRun=0;HaplotypeScore=186.2532;InbreedingCoeff=-0.5133;MQ=51.79;MQ0=6;MQRankSum=-2.271;QD=6.31;ReadPosRankSum=-2.403;VQSLOD=1.1851;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:13,0:12:69.08:69,0,736	0/1:4,0:4:64.85:65,0,213	0/0:2,0:2:6.02:0,6,122	./.	0/0:26,0:26:15.04:0,15,1504	0/1:14,0:14:68.71:69,0,725	0/1:17,0:17:64.02:64,0,982	0/1:27,9:31:99:183,0,816	0/0:20,0:20:38.72:0,39,929	0/1:27,0:26:50.16:50,0,2249	0/1:20,0:20:50.97:51,0,1545	0/1:23,0:22:99:187,0,1595	0/1:31,0:29:99:114,0,1582	0/0:23,0:23:11.88:0,12,957	0/0:15,0:15:45.12:0,45,1699	0/0:14,0:14:35.27:0,35,1209	0/1:16,0:16:99:260,0,794	0/1:11,0:11:22.88:23,0,382	0/1:10,6:15:99:299,0,731	0/0:14,0:14:27.09:0,27,1111	0/1:11,0:11:77.67:78,0,196	0/1:24,0:24:99:250,0,977	0/1:25,6:31:99:169,0,1748	0/1:26,0:26:99:284,0,1594	0/0:27,0:27:30.99:0,31,1050	0/1:12,4:16:99:186,0,748	0/1:25,0:23:34.95:35,0,1717	0/0:14,0:13:15.50:0,15,411
chr10	22848026	.	CTTTATGT	C	825.34	PASS	AB=0.918;AC=13;AF=0.232;AN=56;BaseQRankSum=7.121;DP=568;FS=5.414;HRun=0;HaplotypeScore=172.0382;InbreedingCoeff=-0.3127;MQ=66.86;MQ0=4;MQRankSum=-6.728;QD=3.15;ReadPosRankSum=-5.769;VQSLOD=-0.1557;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:13,4:17:16.61:17,0,791	0/1:8,0:8:55.14:55,0,647	0/0:28,0:18:18.65:0,19,1155	0/0:34,0:15:13.62:0,14,847	0/0:32,0:32:60.18:0,60,1599	0/1:21,1:22:99:329,0,1339	0/1:18,1:18:38.29:38,0,1020	0/0:30,1:31:9.44:0,9,2982	0/1:22,1:22:52.71:53,0,1608	0/0:28,0:27:28.45:0,28,1793	0/0:22,0:19:47.70:0,48,1371	0/0:21,0:21:45.14:0,45,1320	0/0:8,1:9:19.25:0,19,662	0/1:19,4:23:23.63:24,0,1311	0/1:23,0:22:97.31:97,0,1717	0/0:11,0:11:7.07:0,7,528	0/1:16,0:16:96.82:97,0,767	0/1:6,0:6:67.71:68,0,190	0/0:9,0:9:15.83:0,16,644	0/0:21,0:21:57.20:0,57,1926	0/0:9,0:9:21.07:0,21,789	0/1:23,1:22:99:101,0,1272	0/0:18,0:18:39.13:0,39,1338	0/1:17,12:29:43.72:44,0,773	0/1:18,7:25:26.52:27,0,1403	0/1:26,1:27:30.20:30,0,2374	0/0:23,0:23:50.22:0,50,1824	0/0:10,0:9:27.09:0,27,846
chr10	22848067	.	T	TCTCTCTCTC	7693.93	PASS	AB=0.931;AC=29;AF=0.518;AN=56;BaseQRankSum=3.625;DP=537;FS=21.225;HRun=0;HaplotypeScore=190.5313;InbreedingCoeff=-0.7458;MQ=60.21;MQ0=9;MQRankSum=-5.151;QD=15.70;ReadPosRankSum=-7.583;VQSLOD=-0.0447;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:17,0:17:10.55:156,0,11	0/1:7,0:6:24.47:120,0,24	0/1:23,0:11:22.23:22,0,228	0/0:47,0:20:35.69:0,36,541	0/1:18,0:18:10.69:11,0,39	0/1:18,1:21:1.98:763,0,2	0/1:17,0:17:11.10:202,0,11	0/1:27,0:26:99:353,0,139	0/1:14,2:18:13.84:877,0,14	0/1:19,0:18:71.30:160,0,71	0/1:21,0:18:48.40:48,0,59	0/1:12,0:13:16.19:180,0,16	0/1:10,0:13:26.24:387,0,26	0/1:20,3:25:43.20:412,0,43	0/1:24,0:22:99:467,0,483	0/1:14,0:14:99:165,0,185	0/1:15,2:17:38.41:532,0,38	0/1:6,1:6:57.19:100,0,57	0/1:9,1:10:52.16:217,0,52	0/1:28,1:29:33.32:470,0,33	0/1:11,0:11:19.34:72,0,19	1/1:15,2:17:9.99:387,10,0	0/1:21,0:22:45.03:87,0,45	1/1:25,1:26:18.96:322,19,0	0/1:22,0:21:46.40:151,0,46	0/1:26,0:27:98.99:458,0,99	0/1:8,1:13:16.66:469,0,17	0/1:7,1:7:40.50:106,0,41
chr10	22848776	.	G	GA	3214.49	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=-12.803;DP=689;FS=0.000;HRun=9;HaplotypeScore=70.0849;InbreedingCoeff=0.9069;MQ=73.54;MQ0=0;MQRankSum=-0.295;QD=19.25;ReadPosRankSum=0.553;VQSLOD=3.8802;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:37:92.01:0,92,787	1/1:1,9:10:24.06:266,24,0	0/0:34,0:27:59.88:0,60,462	0/1:26,0:21:40.11:40,0,139	0/0:31,0:31:77.97:0,78,676	0/0:32,0:32:89.98:0,90,781	0/0:29,0:29:58.16:0,58,637	0/0:36,0:36:92.97:0,93,807	1/1:2,12:14:30.08:332,30,0	0/0:20,1:21:20.81:0,21,410	0/0:26,1:27:38.80:0,39,565	0/0:20,0:20:56.99:0,57,494	0/0:20,0:20:44.99:0,45,391	0/0:28,0:28:71.97:0,72,625	0/0:18,0:18:41.96:0,42,361	0/0:28,0:28:74.98:0,75,651	1/1:2,26:29:45.97:718,46,0	1/1:3,14:18:38.94:411,39,0	1/1:6,13:19:39.11:431,39,0	1/1:5,31:36:38.07:852,38,0	1/1:1,13:14:33.09:365,33,0	0/0:20,0:20:53.99:0,54,469	0/0:23,0:23:20.89:0,21,410	0/0:13,0:13:35.99:0,36,312	0/0:31,0:32:86.02:0,86,735	0/0:26,0:27:71.01:0,71,604	0/0:24,0:24:71.01:0,71,601	0/0:20,0:20:59.99:0,60,521
chr10	22850657	.	AAAAC	A	13891.85	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=8.037;DP=712;FS=3.525;HRun=0;HaplotypeScore=123.0309;InbreedingCoeff=0.9977;MQ=74.90;MQ0=2;MQRankSum=-5.460;QD=36.95;ReadPosRankSum=3.157;VQSLOD=5.1550;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,24:30:56.78:953,57,0	0/0:10,0:10:30.10:0,30,766	0/0:30,0:26:63.07:0,63,1380	0/0:20,0:18:42.14:0,42,960	0/0:34,0:34:84.29:0,84,2093	1/1:3,23:26:48.16:826,48,0	1/1:2,25:27:60.16:1053,60,0	1/1:5,19:24:57.18:966,57,0	0/0:17,0:17:51.18:0,51,1283	0/0:34,0:34:90.29:0,90,2134	0/0:29,0:29:78.27:0,78,1961	1/1:3,18:21:51.17:894,51,0	1/1:5,31:36:75.26:1312,75,0	1/1:2,19:21:45.15:788,45,0	0/0:32,0:32:90.31:0,90,2284	0/0:17,0:17:48.16:0,48,1221	0/0:27,0:27:69.24:0,69,1700	0/0:12,0:12:36.12:0,36,876	0/0:25,0:25:66.22:0,66,1539	0/0:25,0:25:69.24:0,69,1751	0/0:24,0:24:57.20:0,57,1356	1/1:3,29:32:72.25:1258,72,0	1/1:4,18:22:48.16:826,48,0	1/1:4,32:36:69.24:1211,69,0	1/1:3,24:27:54.18:943,54,0	1/1:1,27:28:78.25:1339,78,0	1/1:4,31:35:72.25:1260,72,0	1/1:3,8:11:15.05:263,15,0
chr10	22851237	.	A	AATCG	716.40	PASS	AB=0.952;AC=11;AF=0.204;AN=54;BaseQRankSum=3.173;DP=270;FS=0.000;HRun=0;HaplotypeScore=60.3876;InbreedingCoeff=-0.0519;MQ=53.14;MQ0=5;MQRankSum=-0.630;QD=7.62;ReadPosRankSum=3.202;VQSLOD=1.4445;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:21.65:0,22,407	0/0:4,0:4:12:0,12,179	0/0:10,0:5:9.02:0,9,118	0/0:16,0:7:4.57:0,5,104	0/1:12,0:11:36.43:87,0,36	0/1:10,0:10:4.94:5,0,249	0/0:4,0:4:12.04:0,12,177	0/0:36,0:36:83.31:0,83,1290	0/1:7,0:7:0.51:1,0,143	0/1:4,13:17:33.30:575,0,33	1/1:8,0:8:9.03:132,9,0	0/1:9,0:9:14.75:15,0,45	0/0:6,0:6:15.05:0,15,250	0/1:7,0:7:3.40:3,0,195	0/0:4,0:4:9.03:0,9,165	0/0:7,0:7:21.07:0,21,375	0/0:15,0:15:19.70:0,20,312	0/0:10,0:10:16.38:0,16,237	0/0:6,0:6:18.06:0,18,315	0/0:9,0:9:20.66:0,21,309	0/0:5,0:5:0.38:0,0,102	./.	0/1:4,0:4:3.56:4,0,47	0/0:4,0:4:1.95:0,2,49	0/1:11,0:11:15.48:15,0,292	0/0:12,0:12:19.84:0,20,398	0/1:9,0:9:9.81:10,0,225	0/0:15,0:14:40.35:0,40,523
chr10	22853094	.	C	CTG	14376.21	PASS	AB=0.577;AC=46;AF=0.821;AN=56;BaseQRankSum=-1.199;DP=687;FS=1.151;HRun=0;HaplotypeScore=111.4196;InbreedingCoeff=0.6929;MQ=65.89;MQ0=13;MQRankSum=1.151;QD=25.63;ReadPosRankSum=5.371;VQSLOD=5.9018;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,32:43:69.23:1125,69,0	1/1:1,6:7:9.03:148,9,0	0/0:47,0:30:41.95:0,42,572	0/0:47,0:17:17.55:0,18,176	1/1:5,21:26:41.73:692,42,0	1/1:2,17:19:42.14:692,42,0	1/1:2,12:14:18.06:297,18,0	1/1:16,25:43:9.28:1140,9,0	1/1:2,20:22:36.12:580,36,0	1/1:4,20:24:65.95:938,66,0	0/1:4,10:14:23.25:158,0,23	1/1:4,13:17:15.03:222,15,0	1/1:6,14:22:14.62:665,15,0	1/1:8,21:29:4.62:606,5,0	0/0:15,0:15:39.09:0,39,471	0/0:17,0:17:45.10:0,45,522	1/1:13,19:31:69.24:1129,69,0	1/1:7,15:22:6.38:421,6,0	1/1:17,9:25:51.15:734,51,0	1/1:4,31:35:54.18:891,54,0	1/1:6,21:26:30.06:496,30,0	1/1:3,13:16:28.89:493,29,0	1/1:5,24:29:35.52:594,36,0	1/1:1,24:25:36.12:594,36,0	0/1:5,15:20:7.41:416,0,7	1/1:3,16:19:48.15:756,48,0	1/1:7,15:21:21.07:347,21,0	1/1:4,3:7:15.05:243,15,0
chr10	22853993	.	AGC	A	5448.09	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-3.272;DP=775;FS=3.172;HRun=0;HaplotypeScore=131.3689;InbreedingCoeff=0.9630;MQ=63.85;MQ0=3;MQRankSum=-1.221;QD=11.57;ReadPosRankSum=1.483;VQSLOD=4.9308;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:48,0:47:58.66:538,59,0	0/0:8,0:8:5.84:0,6,35	0/0:21,0:14:38.85:0,39,322	0/0:27,0:18:43.49:0,43,318	0/0:23,0:23:40.70:0,41,283	1/1:31,0:31:53.93:448,54,0	1/1:44,0:40:33.40:303,33,0	1/1:41,0:40:30.79:547,31,0	1/1:24,0:22:23.97:199,24,0	0/0:29,0:29:60.96:0,61,423	0/0:16,0:16:20.85:0,21,151	1/1:33,0:33:26.90:380,27,0	1/1:24,0:23:19.02:242,19,0	1/1:26,0:25:48.39:398,48,0	0/0:32,0:32:48.24:0,48,489	0/0:37,0:37:50.73:0,51,413	0/0:22,0:22:43.28:0,43,333	0/0:9,0:8:14.79:0,15,111	0/0:24,0:24:43.63:0,44,317	0/0:31,0:31:54.57:0,55,382	0/0:25,0:24:35.61:0,36,253	1/1:8,20:28:6.87:54,7,0	1/1:21,0:21:32.95:270,33,0	1/1:29,0:26:19.68:292,20,0	1/1:37,0:36:62.85:518,63,0	1/1:35,0:34:11.48:474,11,0	1/1:32,0:32:51.03:500,51,0	1/1:18,0:17:35.88:285,36,0
chr10	22855973	.	GA	G	2040.40	PASS	AB=0.950;AC=13;AF=0.232;AN=56;BaseQRankSum=9.380;DP=618;FS=11.506;HRun=10;HaplotypeScore=64.8005;InbreedingCoeff=0.8559;MQ=75.91;MQ0=0;MQRankSum=-1.561;QD=17.59;ReadPosRankSum=1.104;VQSLOD=3.6153;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:72.18:0,72,786	1/1:0,10:10:29.99:260,30,0	0/1:18,1:18:34.98:35,0,246	0/0:17,0:13:7.11:0,7,221	0/0:20,0:20:57.15:0,57,630	0/0:21,0:21:54.11:0,54,573	0/0:14,0:14:36.08:0,36,389	0/0:31,0:31:72.14:0,72,782	0/0:16,0:16:39.09:0,39,423	0/0:24,0:24:34.41:0,34,605	0/0:34,0:34:70.14:0,70,968	0/0:15,0:15:45.08:0,45,484	0/0:37,0:37:95.09:0,95,1081	0/0:16,0:16:45.08:0,45,471	0/0:30,0:30:76.49:0,76,849	0/0:28,1:30:48.17:0,48,780	1/1:0,12:12:32.99:286,33,0	1/1:2,11:13:26.99:234,27,0	1/1:3,18:21:53.69:450,54,0	1/1:2,30:32:89.98:781,90,0	1/1:0,9:9:21:182,21,0	0/0:20,1:21:5.05:0,5,502	0/0:24,0:24:36.83:0,37,608	0/0:19,0:19:57.11:0,57,617	0/0:29,0:29:78.20:0,78,849	0/0:36,0:36:87.24:0,87,961	0/0:33,0:33:84.23:0,84,929	0/0:10,0:10:12.02:0,12,124
chr10	22856801	.	GA	G	6540.52	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-3.447;DP=809;FS=2.263;HRun=1;HaplotypeScore=103.5377;InbreedingCoeff=0.9883;MQ=87.23;MQ0=0;MQRankSum=0.131;QD=39.40;ReadPosRankSum=1.326;VQSLOD=4.9948;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:62,0:62:99:0,180,2854	1/1:0,13:13:39.13:545,39,0	0/0:30,0:30:81.26:0,81,1232	0/0:24,0:24:51.22:0,51,926	0/0:24,0:24:72.25:0,72,1148	0/0:29,0:29:87.30:0,87,1387	0/0:27,0:27:81.26:0,81,1266	0/0:30,0:30:90.31:0,90,1436	0/0:25,0:25:75.26:0,75,1191	0/0:18,0:18:51.17:0,51,815	0/0:24,0:24:72.25:0,72,1151	0/0:30,0:30:90.29:0,90,1415	0/0:33,0:33:99:0,99,1583	0/0:32,0:32:93.30:0,93,1459	0/0:36,0:36:99:0,108,1724	0/0:40,0:40:99:0,120,1896	1/1:0,34:34:93.31:1301,93,0	1/1:0,16:16:48.16:671,48,0	1/1:0,30:30:87.27:1191,87,0	1/1:0,35:35:96.03:1321,96,0	1/1:0,38:38:99:1511,108,0	0/0:28,0:28:78.24:0,78,1217	0/0:26,0:26:78.24:0,78,1193	0/0:30,0:30:90.29:0,90,1416	0/0:21,0:21:63.21:0,63,1005	0/0:42,0:42:99:0,126,1971	0/0:29,0:29:87.28:0,87,1355	0/0:3,0:3:9.03:0,9,144
chr10	22857367	.	G	GGGGAGAATAT	8379.18	PASS	AB=0.958;AC=7;AF=0.125;AN=56;BaseQRankSum=-8.919;DP=728;FS=8.584;HRun=0;HaplotypeScore=230.7497;InbreedingCoeff=0.8361;MQ=83.23;MQ0=0;MQRankSum=-10.734;QD=85.50;ReadPosRankSum=-0.837;VQSLOD=3.6050;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,99,3166	0/0:10,0:10:30.10:0,30,958	0/0:22,0:22:66.21:0,66,1881	0/0:21,0:21:63.16:0,63,1856	1/1:4,13:23:45.06:2039,45,0	0/0:34,0:34:99:0,99,3029	0/0:28,0:28:81.26:0,81,2590	0/0:43,0:43:99:0,120,3736	0/0:29,0:29:87.28:0,87,2806	1/1:5,19:29:84.26:3963,84,0	1/1:3,16:23:48.16:2282,48,0	0/0:36,0:36:99:0,102,3217	0/0:35,0:35:99:0,105,3289	0/0:22,0:22:66.23:0,66,2185	0/0:50,0:50:99:0,147,4619	0/0:34,0:34:99:0,102,3354	0/0:11,0:11:33.11:0,33,1109	0/0:12,0:12:30.10:0,30,965	0/0:22,0:22:66.23:0,66,2161	0/0:33,0:33:93.28:0,93,2955	0/0:20,0:20:60.19:0,60,1930	0/0:29,0:29:87.27:0,87,2764	0/0:19,0:19:57.20:0,57,1897	0/0:21,0:21:60.21:0,60,1905	0/0:21,0:20:63.19:0,63,1955	0/1:22,1:23:95.26:95,0,1977	0/0:31,0:31:90.29:0,90,2858	0/0:9,0:9:27.09:0,27,908
chr10	22859005	.	TTGAGTTTGCTGAATGATG	T	15357.46	PASS	AB=0.560;AC=29;AF=0.518;AN=56;BaseQRankSum=13.786;DP=422;FS=0.000;HRun=0;HaplotypeScore=189.9065;InbreedingCoeff=0.8896;MQ=90.40;MQ0=0;MQRankSum=-12.953;QD=68.56;ReadPosRankSum=3.800;VQSLOD=4.2152;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,9:13:12.04:553,12,0	0/0:8,0:8:18.06:0,18,1502	0/0:19,0:19:33.11:0,33,1805	0/0:20,0:20:30.03:0,30,1148	0/0:20,0:20:60.21:0,60,5097	1/1:0,17:17:39.13:1881,39,0	1/1:0,9:9:12.04:597,12,0	1/1:9,22:31:62.42:766,62,0	1/1:2,11:13:24.08:1147,24,0	0/0:13,0:13:33.11:0,33,2614	0/0:9,0:9:27.09:0,27,2115	1/1:2,19:21:24.08:1154,24,0	1/1:2,18:20:21.07:1045,21,0	1/1:4,12:16:24.08:1147,24,0	0/0:17,0:17:45.15:0,45,2987	0/0:13,0:13:36.12:0,36,2885	0/0:10,0:10:18.53:0,19,1186	0/0:4,0:4:9.03:0,9,772	0/0:20,0:20:57.16:0,57,3490	0/0:17,0:17:45.15:0,45,3284	0/0:28,0:28:75.26:0,75,6180	1/1:0,4:4:6.02:262,6,0	1/1:1,9:10:18.06:813,18,0	1/1:1,7:8:15.05:672,15,0	1/1:0,15:15:30.10:1458,30,0	0/1:3,11:14:99:1223,0,224	1/1:3,19:22:36.12:1743,36,0	1/1:1,10:11:18.06:895,18,0
chr10	22860333	.	ATGTATG	A	3140.70	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=8.257;DP=693;FS=1.089;HRun=0;HaplotypeScore=221.0106;InbreedingCoeff=0.8584;MQ=56.28;MQ0=1;MQRankSum=-10.074;QD=29.08;ReadPosRankSum=-2.588;VQSLOD=2.5308;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:16:24.01:0,24,710	0/0:11,0:11:24.08:0,24,757	0/0:25,0:15:32.85:0,33,365	0/1:19,0:13:1.98:2,0,262	1/1:9,16:25:26.99:500,27,0	0/0:28,0:28:33.11:0,33,1018	0/0:17,0:17:36.11:0,36,1134	0/0:38,0:38:99:0,99,2293	0/0:22,0:22:36.12:0,36,1155	1/1:8,27:35:87.18:1819,87,0	1/1:12,17:29:52.09:962,52,0	0/0:27,0:27:32.98:0,33,958	0/0:31,0:31:51.18:0,51,1700	0/0:27,0:27:36.11:0,36,1151	0/0:27,0:27:75.19:0,75,2112	0/0:25,0:25:66.18:0,66,2138	0/0:23,0:23:49.49:0,49,1512	0/0:13,0:13:15.87:0,16,635	0/0:18,0:18:41.91:0,42,952	0/0:36,0:36:69.24:0,69,2316	0/0:11,0:11:17.99:0,18,615	0/0:27,0:27:40.60:0,41,1321	0/0:30,0:30:41.08:0,41,1379	0/0:17,0:17:11.73:0,12,409	0/0:40,0:40:43.98:0,44,1535	0/0:27,1:28:8.72:0,9,1889	0/0:37,0:37:51.12:0,51,1508	0/0:11,0:11:23.97:0,24,733
chr10	22860366	.	ATATGTG	A	10435.70	PASS	AB=1.000;AC=49;AF=0.875;AN=56;BaseQRankSum=9.764;DP=706;FS=0.571;HRun=0;HaplotypeScore=227.6777;InbreedingCoeff=0.6093;MQ=55.55;MQ0=2;MQRankSum=-6.521;QD=16.89;ReadPosRankSum=-3.760;VQSLOD=3.7448;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,11:22:8.47:190,8,0	1/1:5,7:12:18.06:381,18,0	0/0:39,0:28:19.33:0,19,316	0/0:16,0:11:5.33:0,5,290	1/1:5,24:29:6.02:127,6,0	1/1:5,19:24:29.73:634,30,0	1/1:8,13:21:9.43:146,9,0	1/1:16,21:37:62.97:863,63,0	1/1:1,18:19:14.67:317,15,0	1/1:16,11:28:53.90:841,54,0	1/1:14,20:34:15.97:319,16,0	1/1:5,21:26:38.94:811,39,0	1/1:9,22:31:26.71:571,27,0	1/1:5,26:31:32.69:698,33,0	0/0:32,0:32:87.23:0,87,2312	0/1:26,0:26:15.42:15,0,1005	1/1:9,9:18:0.89:3,1,0	1/1:7,5:12:3.01:63,3,0	1/1:9,9:18:27.02:413,27,0	1/1:6,35:41:32.68:698,33,0	1/1:5,11:16:0.47:1,0,0	1/1:4,18:22:24.43:509,24,0	1/1:6,18:24:12.31:255,12,0	1/1:7,10:17:3.01:64,3,0	1/1:4,30:34:26.90:572,27,0	1/1:7,23:30:68.99:1074,69,0	1/1:8,27:35:29.91:627,30,0	1/1:4,7:11:12.04:245,12,0
chr10	22861232	.	TA	T	1865.52	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.972;DP=582;FS=2.184;HRun=7;HaplotypeScore=60.8105;InbreedingCoeff=0.9970;MQ=74.95;MQ0=0;MQRankSum=0.602;QD=25.91;ReadPosRankSum=0.802;VQSLOD=4.2580;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:54.12:0,54,635	0/0:10,0:10:30.09:0,30,367	0/0:27,0:25:58.49:0,58,670	0/0:13,0:13:23.89:0,24,248	1/1:0,27:27:78.11:782,78,0	0/0:31,0:31:84.27:0,84,1059	0/0:20,0:20:60.19:0,60,757	0/0:39,0:39:96.27:0,96,1163	0/0:10,0:10:30.10:0,30,378	1/1:2,30:32:90.17:903,90,0	1/1:0,13:13:35.92:324,36,0	0/0:18,0:18:48.15:0,48,605	0/0:20,0:20:45.14:0,45,567	0/0:22,0:22:57.17:0,57,706	0/0:30,1:31:53.69:0,54,991	0/0:24,0:24:57.16:0,57,683	0/0:25,0:25:75.20:0,75,906	0/0:8,0:8:21.05:0,21,249	0/0:16,0:16:45.13:0,45,553	0/0:33,0:33:87.26:0,87,1074	0/0:18,0:17:48.12:0,48,569	0/0:19,0:19:54.16:0,54,663	0/0:19,0:19:51.14:0,51,622	0/0:10,0:10:30.05:0,30,360	0/0:20,0:20:48.15:0,48,603	0/0:18,0:18:51.15:0,51,621	0/0:25,0:25:72.08:0,72,870	0/0:11,0:11:30.10:0,30,378
chr10	22862784	.	AGTGTGTGTGTGTGTGTGT	A	5908.13	PASS	AB=0.851;AC=27;AF=0.482;AN=56;BaseQRankSum=5.367;DP=530;FS=13.569;HRun=0;HaplotypeScore=258.8411;InbreedingCoeff=0.5003;MQ=63.37;MQ0=13;MQRankSum=-1.640;QD=19.69;ReadPosRankSum=-1.567;VQSLOD=1.7365;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:25,3:29:18.30:419,0,18	0/0:2,0:6:18.06:0,18,835	0/0:26,0:17:6.02:0,6,192	0/0:24,0:16:6.02:0,6,126	0/0:21,0:23:24.11:0,24,1359	1/1:14,3:18:9.03:417,9,0	1/1:21,3:24:11.97:335,12,0	0/1:24,3:27:25.49:91,0,25	1/1:8,3:11:14.99:381,15,0	0/0:23,0:23:36.12:0,36,2065	0/0:12,0:14:9.50:0,10,405	0/1:21,7:28:99:779,0,141	1/1:23,3:26:15.05:513,15,0	1/1:12,4:16:12.02:458,12,0	0/0:13,0:21:25.33:0,25,1662	0/1:10,1:14:99:127,0,702	0/0:17,0:20:27.09:0,27,1002	0/0:13,0:18:24.08:0,24,901	0/0:13,0:12:6.02:0,6,281	0/0:4,0:5:3.90:0,4,145	0/0:33,0:31:26.93:0,27,1045	1/1:11,2:13:12.03:318,12,0	1/1:11,2:13:8.94:307,9,0	1/1:12,2:13:5.52:57,6,0	1/1:12,2:14:11.12:332,11,0	0/1:24,3:26:99:520,0,188	1/1:13,1:14:6.01:186,6,0	1/1:8,4:12:15.05:666,15,0
chr10	22863146	.	AT	A	2567.03	PASS	AC=34;AF=0.630;AN=54;BaseQRankSum=10.139;DP=218;FS=1.948;HRun=2;HaplotypeScore=48.0392;InbreedingCoeff=0.8464;MQ=66.74;MQ0=0;MQRankSum=-4.318;QD=18.60;ReadPosRankSum=0.682;VQSLOD=3.6799;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,0:8:20.45:154,20,0	0/0:3,0:2:6.02:0,6,90	0/0:5,0:3:3.01:0,3,45	0/0:6,0:5:6.02:0,6,85	1/1:8,1:9:22.69:179,23,0	1/1:12,0:12:26.67:205,27,0	./.	1/1:21,3:24:59.10:477,59,0	1/1:5,0:5:5.96:62,6,0	1/1:6,1:7:17.68:160,18,0	1/1:5,0:5:14.60:101,15,0	1/1:7,3:10:26.12:237,26,0	1/1:7,0:7:17.87:138,18,0	1/1:7,1:8:23.80:191,24,0	0/0:2,0:2:6.02:0,6,80	0/0:4,0:4:12.04:0,12,175	0/0:20,0:20:54.18:0,54,804	0/0:8,0:8:21.07:0,21,307	0/0:20,0:20:60.16:0,60,810	0/0:6,0:6:15.04:0,15,199	0/0:6,0:6:18.06:0,18,265	1/1:2,3:5:8.91:78,9,0	1/1:4,2:6:14.89:126,15,0	1/1:1,0:1:2.99:24,3,0	1/1:5,0:5:13.56:82,14,0	1/1:5,0:5:11.71:88,12,0	1/1:7,2:9:22.71:203,23,0	1/1:10,2:12:32.43:262,32,0
chr10	22863147	.	T	TA	4972.38	PASS	AB=0.857;AC=35;AF=0.648;AN=54;BaseQRankSum=10.110;DP=214;FS=1.951;HRun=1;HaplotypeScore=39.7499;InbreedingCoeff=0.8072;MQ=62.35;MQ0=0;MQRankSum=-3.428;QD=35.02;ReadPosRankSum=1.080;VQSLOD=4.4573;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,8:8:21.07:289,21,0	0/0:3,0:2:6.02:0,6,82	0/0:3,0:1:3.01:0,3,42	0/1:5,0:5:3.31:3,0,73	1/1:2,7:9:24.06:339,24,0	1/1:2,9:11:26.71:412,27,0	./.	1/1:9,15:24:58.96:842,59,0	1/1:4,1:5:5.80:85,6,0	1/1:3,4:7:17.95:234,18,0	1/1:0,5:5:15.05:214,15,0	1/1:3,6:9:27.08:349,27,0	1/1:0,6:6:18.06:276,18,0	1/1:1,7:8:24.08:352,24,0	0/0:2,0:2:6.02:0,6,80	0/0:4,0:4:12.04:0,12,166	0/0:20,0:20:54.18:0,54,753	0/0:8,0:8:21.07:0,21,288	0/0:20,0:20:60.18:0,60,793	0/0:6,0:6:15.04:0,15,189	0/0:6,0:6:18.06:0,18,250	1/1:3,2:5:9.03:124,9,0	1/1:2,4:6:15.05:218,15,0	1/1:0,1:1:3.01:47,3,0	1/1:2,3:6:14.42:177,14,0	1/1:0,4:5:11.83:180,12,0	1/1:3,6:9:22.71:341,23,0	1/1:3,9:12:33.11:490,33,0
chr10	22863149	.	A	AT	4064.79	PASS	AB=0.690;AC=31;AF=0.574;AN=54;BaseQRankSum=8.584;DP=212;FS=3.478;HRun=2;HaplotypeScore=42.4566;InbreedingCoeff=0.6429;MQ=64.56;MQ0=0;MQRankSum=-0.922;QD=29.67;ReadPosRankSum=2.625;VQSLOD=3.2071;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,8:8:12.50:226,12,0	0/0:4,0:3:6.02:0,6,77	0/0:4,0:2:3.01:0,3,39	0/0:6,0:5:5.50:0,6,48	1/1:3,6:10:18.05:294,18,0	1/1:3,9:12:28.86:390,29,0	./.	1/1:9,15:24:37.43:709,37,0	0/1:4,1:5:2.29:42,0,2	0/1:3,4:7:1.37:134,0,1	1/1:0,5:5:15.04:199,15,0	0/1:3,6:9:10.01:157,0,10	1/1:0,6:6:18.06:258,18,0	1/1:1,7:8:15.02:285,15,0	0/0:2,0:2:6.02:0,6,77	0/0:3,0:3:9.03:0,9,117	0/0:20,0:20:54.15:0,54,684	0/0:9,0:9:21.07:0,21,272	0/0:18,0:18:54.15:0,54,662	0/0:3,0:3:9.03:0,9,117	0/0:6,0:6:18.04:0,18,218	1/1:1,2:3:0.18:72,0,0	1/1:2,4:6:5.94:159,6,0	1/1:0,1:1:3.01:44,3,0	1/1:3,3:6:17.79:206,18,0	1/1:1,4:5:15.05:207,15,0	1/1:4,6:9:8.06:269,8,0	1/1:3,9:12:24.84:414,25,0
chr10	22863564	.	TTATA	T	17069.93	PASS	AB=0.917;AC=38;AF=0.679;AN=56;BaseQRankSum=13.842;DP=499;FS=0.399;HRun=0;HaplotypeScore=89.5499;InbreedingCoeff=0.9071;MQ=63.66;MQ0=1;MQRankSum=0.288;QD=44.11;ReadPosRankSum=3.913;VQSLOD=5.4100;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,21:22:45.15:838,45,0	0/0:7,0:7:21.05:0,21,502	0/1:4,0:5:0.29:0,0,75	0/1:6,0:5:1.12:1,0,27	1/1:2,22:24:63.18:1139,63,0	1/1:0,22:22:60.21:1101,60,0	1/1:1,7:8:18.06:335,18,0	1/1:3,35:38:99:1684,105,0	1/1:3,24:27:63.22:1174,63,0	1/1:6,28:33:81.26:1430,81,0	1/1:1,20:21:59.98:918,60,0	1/1:0,15:15:42.14:783,42,0	1/1:1,21:22:63.22:1174,63,0	1/1:2,18:20:48.16:892,48,0	0/0:19,0:19:51.13:0,51,1185	0/0:15,0:15:45.14:0,45,1136	0/0:13,0:13:39.11:0,39,898	0/0:11,0:11:33.10:0,33,821	0/0:19,0:19:54.18:0,54,1377	0/0:18,0:18:51.14:0,51,1205	0/0:10,0:10:30.10:0,30,768	1/1:0,10:10:30.10:559,30,0	1/1:1,14:15:39.13:727,39,0	1/1:0,5:5:12.04:224,12,0	1/1:1,23:24:57.20:1063,57,0	1/1:1,19:20:57.18:1015,57,0	1/1:3,30:32:75.26:1398,75,0	1/1:2,14:16:33.11:615,33,0
chr10	22867428	.	G	GT	10246.54	PASS	AB=0.929;AC=38;AF=0.679;AN=56;BaseQRankSum=-13.120;DP=500;FS=4.279;HRun=8;HaplotypeScore=56.7684;InbreedingCoeff=0.8215;MQ=76.40;MQ0=0;MQRankSum=-1.786;QD=26.82;ReadPosRankSum=-0.385;VQSLOD=5.4199;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,13:17:36.11:416,36,0	0/0:2,0:7:10.18:0,10,30	0/1:20,0:19:10.72:11,0,187	0/1:14,1:11:28.88:29,0,95	1/1:2,21:24:62.95:689,63,0	1/1:2,20:22:57.17:658,57,0	1/1:0,8:8:24.07:277,24,0	1/1:7,32:39:93.17:1005,93,0	1/1:0,16:16:39.12:450,39,0	1/1:1,21:22:63.19:727,63,0	1/1:2,17:19:54.11:599,54,0	1/1:1,14:15:42.12:485,42,0	1/1:2,14:16:45.13:518,45,0	1/1:3,14:17:39.12:449,39,0	0/0:17,0:17:45.02:0,45,412	0/0:14,0:15:44.06:0,44,390	0/0:1,0:20:36.67:0,37,108	0/0:3,0:26:40.24:0,40,118	0/0:1,0:14:24.69:0,25,72	0/0:2,0:15:18.32:0,18,54	0/0:0,0:4:8.15:0,8,24	1/1:1,8:9:24.07:277,24,0	1/1:0,14:14:42.12:485,42,0	1/1:0,11:11:33.10:381,33,0	1/1:1,26:27:75.22:866,75,0	1/1:3,18:21:54.16:623,54,0	1/1:4,18:22:26.70:545,27,0	1/1:1,23:25:66.19:757,66,0
chr10	22867697	.	ATT	A	11461.81	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=15.605;DP=510;FS=0.000;HRun=7;HaplotypeScore=89.9204;InbreedingCoeff=0.9924;MQ=73.43;MQ0=1;MQRankSum=-2.180;QD=33.61;ReadPosRankSum=2.161;VQSLOD=4.6395;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,7:8:24.06:292,24,0	0/0:8,0:8:24.08:0,24,420	0/0:10,0:10:18.06:0,18,301	0/0:9,0:9:18.05:0,18,263	1/1:1,24:25:69.21:879,69,0	1/1:4,20:24:57.18:726,57,0	1/1:2,8:10:21.07:268,21,0	1/1:2,24:26:72.19:878,72,0	1/1:1,19:20:57.18:726,57,0	1/1:3,21:24:63.20:803,63,0	1/1:2,22:24:60.19:765,60,0	1/1:1,19:20:51.16:650,51,0	1/1:0,16:16:42.13:535,42,0	1/1:3,15:18:48.15:611,48,0	0/0:18,0:18:48.16:0,48,840	0/0:20,0:20:57.20:0,57,993	0/0:23,0:23:69.15:0,69,1135	0/0:24,0:24:69.24:0,69,1194	0/0:20,0:20:60.19:0,60,1021	0/0:31,0:31:87.29:0,87,1494	0/0:6,0:6:15.05:0,15,262	1/1:0,8:7:18.05:229,18,0	1/1:1,15:16:39.12:497,39,0	1/1:0,11:11:30.10:382,30,0	1/1:0,28:28:84.27:1070,84,0	1/1:1,22:23:66.18:811,66,0	1/1:3,26:29:81.26:1032,81,0	1/1:2,9:11:24.08:306,24,0
chr10	22867774	.	AT	A	7212.08	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=12.945;DP=551;FS=9.608;HRun=8;HaplotypeScore=81.6659;InbreedingCoeff=0.9668;MQ=70.77;MQ0=1;MQRankSum=-2.088;QD=23.26;ReadPosRankSum=-1.912;VQSLOD=4.1892;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,19:20:51.02:481,51,0	0/0:9,0:9:24.07:0,24,290	0/0:13,0:13:19.97:0,20,279	0/0:10,0:6:6.02:0,6,68	0/0:33,0:33:96.25:0,96,1107	1/1:3,18:21:56.99:525,57,0	1/1:1,11:12:24.04:232,24,0	1/1:5,32:37:96.09:912,96,0	1/1:4,13:17:39.01:368,39,0	0/0:20,0:20:41.96:0,42,481	0/0:15,0:15:42.01:0,42,472	1/1:3,12:15:39.05:372,39,0	1/1:1,20:22:61.97:546,62,0	1/1:2,22:24:66.04:626,66,0	0/0:28,0:28:84.26:0,84,1015	0/0:24,0:24:69.21:0,69,834	0/0:28,0:28:75.23:0,75,906	0/0:16,0:16:39.12:0,39,471	0/0:16,0:16:39.11:0,39,461	0/0:22,0:22:60.17:0,60,711	0/0:6,0:6:15.05:0,15,181	1/1:1,10:11:30.03:284,30,0	1/1:3,12:15:42.01:392,42,0	1/1:1,7:8:21.03:203,21,0	1/1:4,36:40:62.55:822,63,0	1/1:7,18:25:23.83:510,24,0	1/1:3,33:36:93.07:882,93,0	1/1:5,2:7:6.01:58,6,0
chr10	22869508	.	C	CT	10075.64	PASS	AB=1.000;AC=37;AF=0.661;AN=56;BaseQRankSum=-11.617;DP=554;FS=0.000;HRun=8;HaplotypeScore=51.8396;InbreedingCoeff=0.9281;MQ=70.62;MQ0=0;MQRankSum=2.774;QD=25.13;ReadPosRankSum=1.655;VQSLOD=5.3947;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,19:19:51.11:574,51,0	0/0:6,0:6:17.99:0,18,159	0/1:10,0:10:2.25:2,0,15	0/0:7,0:7:9.75:0,10,53	1/1:6,34:41:99:1156,105,0	1/1:2,27:29:69.21:796,69,0	1/1:2,13:15:30.09:346,30,0	1/1:6,23:28:69.10:714,69,0	1/1:3,11:14:30.09:346,30,0	1/1:3,18:21:54.07:585,54,0	1/1:4,26:30:81.07:885,81,0	1/1:2,17:19:17.67:457,18,0	1/1:2,19:21:45.10:505,45,0	1/1:1,18:19:39.12:449,39,0	0/0:19,0:19:44.99:0,45,407	0/0:23,0:23:60:0,60,538	0/0:20,0:20:59.98:0,60,534	0/0:15,0:15:41.95:0,42,369	0/0:26,0:25:54:0,54,489	0/0:33,1:34:58.33:0,58,769	0/0:3,0:3:9:0,9,82	1/1:5,16:21:48.06:536,48,0	1/1:3,20:23:44.17:579,44,0	1/1:0,6:6:15.04:173,15,0	1/1:5,20:25:51.15:588,51,0	1/1:2,16:18:23.67:517,24,0	1/1:4,24:28:57.13:658,57,0	1/1:1,10:11:18.05:208,18,0
chr10	22871361	.	A	AG	5314.23	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=16.073;DP=772;FS=0.000;HRun=1;HaplotypeScore=78.0781;InbreedingCoeff=0.9996;MQ=83.53;MQ0=0;MQRankSum=-1.099;QD=41.52;ReadPosRankSum=-0.091;VQSLOD=4.9723;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:56:99:0,166,2126	1/1:1,16:17:48.16:719,48,0	0/0:20,0:20:54.16:0,54,678	0/0:24,0:24:60.18:0,60,749	0/0:29,0:29:84.26:0,84,1077	0/0:27,0:27:78.25:0,78,1013	0/0:40,0:40:99:0,117,1489	0/0:38,0:38:99:0,111,1418	0/0:29,0:29:87.28:0,87,1130	0/0:24,0:24:72.23:0,72,935	0/0:21,0:21:60.20:0,60,779	0/0:28,0:28:81.26:0,81,1052	0/0:37,0:37:99:0,108,1382	0/0:24,0:24:72.23:0,72,935	0/0:44,0:44:99:0,132,1687	0/0:25,0:25:75.24:0,75,974	1/1:2,24:26:66.22:982,66,0	1/1:0,19:19:51.17:764,51,0	1/1:1,18:19:54.18:806,54,0	1/1:0,27:27:81.23:1188,81,0	1/1:0,20:20:57.19:854,57,0	0/0:22,0:22:66.20:0,66,842	0/0:17,0:17:45.15:0,45,584	0/0:38,0:38:99:0,114,1480	0/0:24,0:24:72.23:0,72,935	0/0:29,0:29:84.27:0,84,1090	0/0:40,0:40:99:0,114,1480	0/0:8,0:8:24.08:0,24,312
chr10	22873384	.	CTT	C	8739.88	PASS	AB=0.931;AC=44;AF=0.786;AN=56;BaseQRankSum=-2.000;DP=613;FS=0.378;HRun=13;HaplotypeScore=82.9009;InbreedingCoeff=0.7949;MQ=71.62;MQ0=3;MQRankSum=-4.249;QD=18.06;ReadPosRankSum=6.564;VQSLOD=4.0291;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,21:24:50.90:472,51,0	1/1:0,9:10:29.79:274,30,0	0/1:16,0:15:6.63:7,0,198	0/1:10,0:10:18.51:19,0,44	0/0:3,0:23:60:0,60,602	1/1:5,15:21:29.91:341,30,0	1/1:3,23:27:44.99:486,45,0	1/1:12,25:39:53.78:658,54,0	1/1:2,26:28:60.04:582,60,0	0/0:7,0:28:63.94:0,64,676	0/0:3,0:23:63.03:0,63,603	1/1:4,19:23:42.02:407,42,0	1/1:3,23:26:11.66:475,12,0	1/1:7,18:25:51.01:495,51,0	0/0:24,0:26:71.16:0,71,886	0/0:29,0:29:66.18:0,66,885	1/1:3,12:16:17.93:224,18,0	1/1:8,16:24:38.32:377,38,0	1/1:3,17:20:51.04:489,51,0	1/1:3,18:22:23.75:282,24,0	1/1:2,13:16:32.77:303,33,0	1/1:2,5:8:11.95:166,12,0	1/1:3,19:22:50.43:477,50,0	1/1:1,16:17:16.84:353,17,0	1/1:3,18:23:47.73:497,48,0	1/1:4,26:29:68.27:667,68,0	1/1:6,15:22:32.85:370,33,0	1/1:0,11:11:33.05:320,33,0
chr10	22873742	.	TA	T	1210.36	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=7.086;DP=546;FS=0.524;HRun=9;HaplotypeScore=52.8536;InbreedingCoeff=0.9240;MQ=64.87;MQ0=0;MQRankSum=1.162;QD=21.23;ReadPosRankSum=0.799;VQSLOD=4.2462;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:60.17:0,60,681	0/0:10,0:10:30.09:0,30,346	0/0:6,0:6:11.77:0,12,107	0/0:3,0:3:3.01:0,3,35	0/0:26,0:26:75.17:0,75,826	0/0:19,0:19:57.17:0,57,658	0/0:14,0:14:39.12:0,39,450	0/0:24,1:25:38.73:0,39,697	0/0:20,1:21:32.69:0,33,610	0/0:26,0:26:69.19:0,69,781	0/0:23,0:23:63.18:0,63,716	0/0:22,1:23:35.72:0,36,655	0/0:20,0:20:48.13:0,48,544	0/0:23,0:23:54.15:0,54,615	0/0:27,0:27:78.22:0,78,891	0/0:24,0:24:63.16:0,63,701	0/0:22,0:22:63.19:0,63,726	0/0:13,0:13:30.07:0,30,334	1/1:2,16:18:48:429,48,0	1/1:3,24:27:65.95:594,66,0	1/1:0,12:12:36.02:329,36,0	0/0:18,0:18:45.12:0,45,509	0/0:16,0:16:45.13:0,45,519	0/0:14,0:14:33.07:0,33,361	0/0:15,1:16:14.65:0,15,413	0/0:33,0:33:93.27:0,93,1066	0/0:31,0:31:87.26:0,87,1002	0/0:16,0:16:45.12:0,45,509
chr10	22874673	.	GGTGTGTGT	G	2046.88	PASS	AB=0.780;AC=37;AF=0.740;AN=50;BaseQRankSum=6.919;DP=532;FS=4.129;HRun=0;HaplotypeScore=168.9711;InbreedingCoeff=0.4723;MQ=58.05;MQ0=11;MQRankSum=-5.704;QD=5.59;ReadPosRankSum=1.134;VQSLOD=2.3956;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:38,3:41:2.97:20,3,0	1/1:7,0:15:3.01:56,3,0	./.	./.	0/0:18,0:18:12.04:0,12,390	1/1:7,6:13:2.97:20,3,0	1/1:20,0:21:2.56:23,3,0	1/1:20,0:20:4.90:48,5,0	0/1:5,7:12:12.92:213,0,13	0/0:23,0:23:28.84:0,29,628	0/0:24,0:24:21.04:0,21,405	1/1:12,7:21:6.02:150,6,0	1/1:12,1:14:9.03:168,9,0	1/1:9,6:17:15.03:336,15,0	0/0:15,0:15:15.05:0,15,551	0/0:29,0:29:51.18:0,51,1911	1/1:11,0:16:6.02:109,6,0	1/1:18,0:23:9.50:169,10,0	1/1:16,0:17:4.34:103,4,0	1/1:10,0:15:6.02:112,6,0	0/1:15,0:14:5.04:5,0,77	0/1:10,2:17:0:1,0,0	1/1:15,7:23:0.47:1,0,0	1/1:14,7:23:12.03:241,12,0	./.	1/1:21,1:22:15.01:288,15,0	1/1:7,2:9:3.01:68,3,0	1/1:3,4:6:2.47:73,2,0
chr10	22874711	.	TGTGTGTGTGC	T	2340.21	PASS	AB=0.958;AC=30;AF=0.556;AN=54;BaseQRankSum=5.859;DP=539;FS=14.897;HRun=0;HaplotypeScore=194.3875;InbreedingCoeff=-0.0074;MQ=47.40;MQ0=24;MQRankSum=-5.457;QD=6.05;ReadPosRankSum=2.997;VQSLOD=1.5776;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:34,13:46:50.58:122,0,51	1/1:10,0:9:1.44:51,1,0	1/1:5,0:2:0.46:1,0,0	./.	0/0:20,0:19:11.56:0,12,400	1/1:10,0:10:0.11:4,0,0	0/1:24,0:24:6.19:87,0,6	1/1:18,0:17:9.93:222,10,0	0/1:16,2:17:21.22:161,0,21	0/1:27,0:27:99:130,0,881	0/0:23,0:23:21.50:0,21,466	0/1:22,2:23:32.39:103,0,32	1/1:17,3:19:1.35:203,1,0	1/1:24,1:25:3.57:305,4,0	0/0:15,0:14:27:0,27,859	0/0:28,0:28:69.61:0,70,2702	0/1:21,0:20:32.96:94,0,33	0/1:24,0:23:99:120,0,100	0/1:19,0:17:60.93:61,0,142	0/1:17,0:17:27.38:95,0,27	0/0:17,0:15:5.98:0,6,126	1/1:19,0:19:1.45:3,1,0	0/0:18,0:17:3.34:0,3,11	0/1:30,1:30:1.10:202,0,1	0/0:15,6:21:0.23:0,0,3	1/1:7,6:13:11.10:350,11,0	1/1:7,1:6:0.05:109,0,0	1/1:7,0:6:1.54:63,2,0
chr10	22874719	.	TGC	T	713.46	PASS	AB=0.900;AC=10;AF=0.179;AN=56;BaseQRankSum=-2.384;DP=541;FS=21.267;HRun=0;HaplotypeScore=164.0617;InbreedingCoeff=0.4143;MQ=50.73;MQ0=21;MQRankSum=-1.582;QD=6.61;ReadPosRankSum=-0.725;VQSLOD=1.9490;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:45:12.54:0,13,46	0/0:10,0:9:1.25:0,1,3	0/0:10,0:3:0.81:0,1,3	0/1:8,0:2:0:0,0,0	0/1:6,12:17:10.20:71,0,10	0/0:11,0:11:4.93:0,5,16	0/0:22,0:22:14.70:0,15,37	1/1:20,0:19:2.77:124,3,0	0/0:17,0:16:7.40:0,7,21	1/1:25,0:25:43.91:518,44,0	1/1:3,13:16:5.10:69,5,0	0/0:24,0:23:12.95:0,13,51	0/0:20,0:19:9.19:0,9,24	0/0:27,0:27:15.40:0,15,38	0/0:14,0:13:23.93:0,24,242	0/0:28,0:28:57.77:0,58,725	0/0:23,0:22:14.33:0,14,97	0/0:26,0:25:37.99:0,38,212	0/0:21,0:19:38.50:0,38,201	0/0:18,0:18:8.14:0,8,47	0/0:18,0:16:6.43:0,6,46	0/0:17,0:17:2.64:0,3,13	0/0:19,0:18:7.11:0,7,20	0/0:33,0:32:6.32:0,6,23	0/0:23,0:23:4.36:0,4,10	0/1:13,0:13:6.33:34,0,6	0/1:8,0:7:2.70:33,0,3	0/0:6,0:5:2.13:0,2,6
chr10	22874724	.	A	ACG	4551.67	PASS	AB=0.865;AC=42;AF=0.750;AN=56;BaseQRankSum=0.458;DP=551;FS=5.955;HRun=0;HaplotypeScore=156.3173;InbreedingCoeff=0.7491;MQ=51.77;MQ0=19;MQRankSum=0.429;QD=10.23;ReadPosRankSum=-1.515;VQSLOD=3.7529;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:44,1:43:50.19:384,50,0	1/1:7,2:8:6.02:79,6,0	0/0:12,0:4:5.89:0,6,38	0/1:9,0:3:0:0,0,0	0/0:16,0:15:6.02:0,6,72	1/1:13,0:13:17.93:161,18,0	1/1:24,0:24:50.75:433,51,0	1/1:11,15:25:44.69:373,45,0	1/1:17,0:16:14.72:92,15,0	0/0:24,0:24:51.16:0,51,632	0/0:17,0:17:9.03:0,9,108	1/1:24,0:23:37.33:250,37,0	1/1:19,0:18:15.25:154,15,0	1/1:27,0:27:45.17:307,45,0	0/0:11,0:10:21.05:0,21,249	0/0:26,0:26:49.04:0,49,601	1/1:5,21:28:12.51:184,13,0	1/1:6,21:27:30.57:466,31,0	0/1:12,7:17:13.39:265,0,13	1/1:4,13:17:11.55:157,12,0	1/1:10,8:17:6.02:99,6,0	1/1:17,0:17:20.38:157,20,0	1/1:21,0:20:26:212,26,0	1/1:31,0:31:30.69:221,31,0	1/1:21,0:21:23.26:185,23,0	1/1:15,0:15:20.25:147,20,0	1/1:8,0:7:8.87:61,9,0	1/1:8,0:7:9.40:166,9,0
chr10	22877460	.	CT	C	454.22	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.692;DP=640;FS=18.986;HRun=9;HaplotypeScore=59.6420;InbreedingCoeff=0.9934;MQ=77.42;MQ0=1;MQRankSum=-4.014;QD=18.17;ReadPosRankSum=2.518;VQSLOD=2.4165;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,23:25:60.03:549,60,0	0/0:13,0:13:39.12:0,39,450	0/0:23,0:21:31.44:0,31,446	0/0:18,0:14:27.95:0,28,295	0/0:42,0:42:99:0,117,1331	0/0:28,0:28:78.21:0,78,880	0/0:12,0:12:33.10:0,33,381	0/0:26,0:26:60.15:0,60,673	0/0:19,0:19:51.14:0,51,578	0/0:31,0:31:84.23:0,84,947	0/0:22,0:22:54.15:0,54,613	0/0:23,0:23:69.17:0,69,766	0/0:30,0:30:84.23:0,84,958	0/0:28,0:28:78.22:0,78,889	0/0:20,0:20:54.15:0,54,614	0/0:26,0:26:72.20:0,72,822	0/0:22,0:22:54.16:0,54,622	0/0:8,0:8:21.06:0,21,241	0/0:25,0:24:66.20:0,66,762	0/0:29,0:29:78.23:0,78,900	0/0:10,0:9:29.96:0,30,326	0/0:23,0:24:69.04:0,69,775	0/0:27,0:27:81.23:0,81,921	0/0:18,0:18:48.14:0,48,553	0/0:26,0:26:72.19:0,72,813	0/0:25,0:25:57.17:0,57,658	0/0:30,0:30:90.25:0,90,1028	0/0:10,0:10:30.09:0,30,346
chr10	22878246	.	ATGTC	A	17360.90	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=18.852;DP=723;FS=0.291;HRun=0;HaplotypeScore=122.6597;InbreedingCoeff=0.9882;MQ=59.91;MQ0=0;MQRankSum=-8.521;QD=42.24;ReadPosRankSum=1.280;VQSLOD=4.8653;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,44:45:99:1887,105,0	0/0:16,0:16:45.15:0,45,1165	0/0:9,0:9:15.52:0,16,388	0/0:8,0:6:15.05:0,15,391	0/0:32,0:32:87.28:0,87,2126	1/1:3,18:21:48.16:863,48,0	1/1:5,16:21:45.15:809,45,0	1/1:8,32:40:93.30:1620,93,0	1/1:1,13:14:33.11:593,33,0	0/0:35,0:35:93.21:0,93,2319	0/0:29,0:29:78.27:0,78,2026	1/1:1,22:22:57.16:991,57,0	1/1:3,24:27:66.23:1186,66,0	1/1:2,26:28:66.23:1186,66,0	0/0:32,0:32:90.31:0,90,2307	0/0:42,0:42:99:0,123,3131	0/0:19,0:19:54.19:0,54,1369	0/0:21,0:21:60.21:0,60,1558	0/0:17,0:17:42.14:0,42,1050	0/0:34,0:34:90.31:0,90,2306	0/0:18,0:18:45.15:0,45,1113	1/1:2,22:24:60.21:1078,60,0	1/1:3,25:28:75.21:1314,75,0	1/1:2,29:31:69.24:1240,69,0	1/1:2,20:22:54.19:971,54,0	1/1:3,29:32:9.29:1392,9,0	1/1:9,30:39:90.27:1582,90,0	1/1:0,14:14:36.12:647,36,0
chr10	22879592	.	A	AG	9153.98	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=11.087;DP=661;FS=3.100;HRun=1;HaplotypeScore=132.2042;InbreedingCoeff=0.9953;MQ=73.67;MQ0=0;MQRankSum=-4.509;QD=15.98;ReadPosRankSum=0.711;VQSLOD=5.0905;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:22:54.04:267,54,0	1/1:7,0:7:16.18:116,16,0	0/0:17,0:17:51.14:0,51,645	0/0:14,0:14:39.10:0,39,482	1/1:36,0:36:92.51:518,93,0	1/1:33,0:33:85.37:557,85,0	1/1:23,0:23:63.04:413,63,0	1/1:28,0:28:81.73:580,82,0	1/1:18,0:18:52.76:387,53,0	1/1:39,0:39:71.57:697,72,0	1/1:24,0:24:68.23:399,68,0	1/1:27,0:26:56.39:327,56,0	1/1:24,0:24:61.80:367,62,0	1/1:27,0:27:70.18:425,70,0	0/0:31,0:31:87.28:0,87,1130	0/0:26,0:26:78.24:0,78,999	1/1:14,2:16:38.48:245,38,0	1/1:10,0:10:23.45:105,23,0	1/1:17,5:20:47.39:319,47,0	1/1:37,0:37:96.46:546,96,0	1/1:11,0:11:23.99:169,24,0	1/1:29,0:29:71.70:417,72,0	1/1:32,0:32:83.21:533,83,0	1/1:18,0:18:47.80:291,48,0	1/1:22,0:21:53.09:339,53,0	1/1:21,0:21:56.05:401,56,0	1/1:34,0:34:88.59:528,89,0	1/1:13,0:13:35.75:206,36,0
chr10	22879889	.	A	ACCTACCTA	12528.47	PASS	AB=1.000;AC=31;AF=0.554;AN=56;BaseQRankSum=1.131;DP=656;FS=0.000;HRun=0;HaplotypeScore=189.3830;InbreedingCoeff=0.8320;MQ=51.51;MQ0=4;MQRankSum=-3.918;QD=29.83;ReadPosRankSum=-2.608;VQSLOD=4.0886;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:21:31.78:461,32,0	0/0:13,0:13:0.51:0,1,300	0/0:15,0:12:23.63:0,24,238	0/0:7,0:4:8.82:0,9,138	0/0:26,0:26:10.49:0,10,537	1/1:26,0:26:44.62:832,45,0	1/1:23,0:22:26.69:734,27,0	1/1:39,0:39:77.59:999,78,0	1/1:11,16:29:20.35:278,20,0	0/0:27,0:27:27.52:0,28,924	0/0:16,0:16:1.56:0,2,246	1/1:26,0:23:54.18:1162,54,0	1/1:38,0:38:72.22:1276,72,0	1/1:30,0:29:69.48:1439,69,0	0/0:25,0:25:6.79:0,7,638	0/1:28,0:28:46.92:47,0,723	0/0:17,0:17:29.99:0,30,373	0/0:13,0:13:27.96:0,28,311	0/0:23,0:23:62.99:0,63,806	0/0:36,0:35:34.48:0,34,656	0/0:18,0:16:27.07:0,27,385	1/1:13,0:13:30.10:471,30,0	1/1:22,0:22:24.08:409,24,0	1/1:19,0:18:29.10:421,29,0	1/1:35,0:33:57.55:1253,58,0	1/1:28,0:26:18.10:1037,18,0	1/1:31,0:31:62.95:1126,63,0	1/1:12,0:12:33.10:584,33,0
chr10	22880578	.	G	GAT	7286.86	PASS	AC=32;AF=0.615;AN=52;BaseQRankSum=-0.672;DP=329;FS=2.534;HRun=0;HaplotypeScore=63.6443;InbreedingCoeff=0.8939;MQ=61.11;MQ0=0;MQRankSum=-7.381;QD=35.03;ReadPosRankSum=-0.806;VQSLOD=6.5024;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,7:12:21.07:344,21,0	0/0:8,0:8:24.08:0,24,298	0/0:5,0:5:4.25:0,4,32	0/0:6,0:5:6.02:0,6,71	1/1:8,14:22:13.96:722,14,0	1/1:5,17:22:54.18:883,54,0	1/1:3,0:3:6.02:98,6,0	1/1:18,17:35:75.24:1181,75,0	1/1:0,3:3:9.03:147,9,0	1/1:10,12:22:51.17:822,51,0	1/1:3,11:14:30.10:491,30,0	1/1:3,3:6:12.04:195,12,0	1/1:7,6:13:18.06:294,18,0	1/1:4,5:9:21.06:319,21,0	0/0:5,0:5:15.03:0,15,174	0/0:14,0:14:27.08:0,27,335	0/0:27,0:27:57.11:0,57,674	0/0:8,0:8:24.08:0,24,298	0/0:18,0:18:42.13:0,42,521	0/0:19,0:19:30.08:0,30,359	0/0:6,0:6:6.02:0,6,75	./.	1/1:2,2:4:9.03:143,9,0	./.	1/1:4,10:13:27.09:441,27,0	1/1:5,11:16:36.12:570,36,0	1/1:0,8:8:24.08:392,24,0	1/1:0,5:5:15.05:245,15,0
chr10	22880601	.	A	AT	9173.95	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-1.241;DP=310;FS=0.719;HRun=5;HaplotypeScore=56.2192;InbreedingCoeff=0.8530;MQ=71.41;MQ0=0;MQRankSum=-5.149;QD=33.73;ReadPosRankSum=0.105;VQSLOD=5.0279;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,11:11:33.11:434,33,0	1/1:0,8:8:24.08:315,24,0	0/0:8,0:8:17.38:0,17,159	0/0:9,0:8:12.02:0,12,129	1/1:1,17:18:48.15:621,48,0	1/1:8,10:18:42.10:499,42,0	1/1:1,4:5:12.04:158,12,0	1/1:6,24:30:75.22:965,75,0	1/1:1,3:4:9.03:118,9,0	1/1:2,16:18:51.16:666,51,0	1/1:1,12:13:33.11:428,33,0	1/1:1,2:3:6.02:79,6,0	1/1:1,9:10:24.08:315,24,0	1/1:1,6:7:18.06:231,18,0	0/0:11,0:11:30.06:0,30,314	0/0:10,0:10:30.08:0,30,322	1/1:1,20:21:54.18:711,54,0	1/1:2,10:12:30.57:395,31,0	1/1:2,14:16:42.14:552,42,0	1/1:0,14:14:42.14:551,42,0	1/1:0,4:4:9.03:117,9,0	1/1:0,1:1:3.01:39,3,0	1/1:0,3:3:9.03:118,9,0	1/1:0,5:5:12.04:158,12,0	1/1:1,14:14:36.12:471,36,0	1/1:3,11:14:33.11:434,33,0	1/1:1,15:16:45.15:591,45,0	1/1:3,3:6:18.03:205,18,0
chr10	22881009	.	T	TA	1890.69	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-0.998;DP=430;FS=1.664;HRun=7;HaplotypeScore=52.1969;InbreedingCoeff=0.9632;MQ=72.23;MQ0=0;MQRankSum=-1.382;QD=25.90;ReadPosRankSum=-2.058;VQSLOD=3.3211;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:54.05:0,54,513	1/1:0,6:6:18.06:217,18,0	0/0:14,0:14:11.11:0,11,172	0/0:8,0:6:5.35:0,5,29	0/0:29,0:29:78.12:0,78,751	0/0:20,0:20:60.06:0,60,566	0/0:7,0:7:21.02:0,21,198	0/0:23,0:23:48.05:0,48,459	0/0:9,0:9:27.04:0,27,261	0/0:24,0:24:62.93:0,63,593	0/0:26,0:26:69.09:0,69,661	0/0:11,0:11:30.03:0,30,284	0/0:17,0:17:41.99:0,42,389	0/0:16,0:16:33:0,33,310	0/0:18,0:18:48.06:0,48,457	0/0:16,0:16:42.06:0,42,406	1/1:3,16:19:45.44:504,45,0	1/1:1,5:6:18.03:204,18,0	1/1:8,10:18:42.07:459,42,0	1/1:4,12:17:41.94:450,42,0	1/1:1,6:7:21.02:243,21,0	0/0:11,0:11:27.03:0,27,257	0/0:13,0:13:30.02:0,30,283	0/0:12,0:12:33.04:0,33,312	0/0:14,0:14:33.03:0,33,313	0/0:13,0:13:29.78:0,30,272	0/0:19,0:19:48.03:0,48,455	0/0:14,0:14:42.07:0,42,405
chr10	22881044	.	C	CAAAAA	2435.19	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=4.335;DP=466;FS=1.312;HRun=10;HaplotypeScore=97.1539;InbreedingCoeff=0.9074;MQ=76.46;MQ0=0;MQRankSum=-6.389;QD=37.46;ReadPosRankSum=-5.456;VQSLOD=1.1730;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:42.06:0,42,652	1/1:5,0:5:2.99:24,3,0	0/0:19,0:18:10.70:0,11,114	0/0:14,0:11:7.23:0,7,140	0/0:29,0:29:62.96:0,63,988	0/0:27,0:27:71.35:0,71,1116	0/0:11,0:11:30.09:0,30,483	0/0:27,0:28:66.01:0,66,1032	0/0:9,0:9:21.02:0,21,338	0/0:23,0:23:57.09:0,57,898	0/0:22,0:22:47.99:0,48,744	0/0:15,0:15:33.01:0,33,531	0/0:21,0:21:57.11:0,57,916	0/0:14,0:14:42.14:0,42,674	0/0:21,0:20:57.13:0,57,917	0/0:23,0:23:69.24:0,69,1098	1/1:9,0:10:15.05:316,15,0	1/1:2,2:4:6.02:167,6,0	1/1:4,9:18:48.14:977,48,0	1/1:16,4:20:33.11:838,33,0	1/1:8,0:8:15.03:286,15,0	0/0:11,0:11:23.98:0,24,386	0/0:9,0:9:24.05:0,24,386	0/0:9,0:10:29.59:0,30,443	0/0:18,0:18:48.15:0,48,771	0/0:24,0:24:66.14:0,66,1024	0/0:22,0:23:66.19:0,66,1043	0/0:9,0:9:24.03:0,24,386
chr10	22883119	.	CA	C	2905.59	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=13.890;DP=735;FS=0.848;HRun=6;HaplotypeScore=89.4536;InbreedingCoeff=0.9989;MQ=88.71;MQ0=0;MQRankSum=-1.976;QD=23.82;ReadPosRankSum=1.245;VQSLOD=3.0992;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:96.28:0,96,1230	1/1:2,15:17:36.09:387,36,0	0/0:29,0:29:66.18:0,66,807	0/0:31,0:30:53.21:0,53,761	0/0:34,0:34:87.28:0,87,1145	0/0:26,0:26:72.22:0,72,933	0/0:27,0:27:66.20:0,66,849	0/0:26,0:26:63.19:0,63,803	0/0:16,0:16:45.14:0,45,579	0/0:24,0:24:69.22:0,69,897	0/0:32,0:32:93.28:0,93,1194	0/0:30,0:30:84.20:0,84,1043	0/0:34,0:34:96.30:0,96,1233	0/0:23,0:23:66.19:0,66,841	0/0:36,0:36:99:0,102,1274	0/0:29,0:29:84.24:0,84,1075	1/1:2,21:23:54.14:580,54,0	1/1:0,10:10:21.05:225,21,0	1/1:2,11:13:33.06:346,33,0	1/1:4,43:47:99:1265,123,0	1/1:1,11:12:27.07:290,27,0	0/0:19,0:19:57.19:0,57,749	0/0:28,0:28:81.24:0,81,1038	0/0:19,0:19:54.18:0,54,710	0/0:31,0:31:90.29:0,90,1182	0/0:34,0:34:96.31:0,96,1247	0/0:36,0:36:99:0,108,1378	0/0:15,0:15:44.81:0,45,528
chr10	22883308	.	A	ACG	3934.61	PASS	AB=1.000;AC=33;AF=0.589;AN=56;BaseQRankSum=-2.173;DP=605;FS=15.187;HRun=0;HaplotypeScore=109.3795;InbreedingCoeff=0.6707;MQ=62.18;MQ0=17;MQRankSum=0.123;QD=9.44;ReadPosRankSum=1.028;VQSLOD=2.4769;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,29:35:12.04:214,12,0	0/1:9,0:9:15.73:16,0,71	0/0:17,0:7:18.01:0,18,168	0/0:18,0:7:17.48:0,17,133	0/0:18,0:17:35.94:0,36,293	1/1:5,2:32:21.07:300,21,0	1/1:5,13:19:2.15:26,2,0	1/1:30,0:30:68.06:518,68,0	1/1:1,9:14:2.86:53,3,0	0/0:23,0:22:44.66:0,45,383	0/0:18,0:18:41.93:0,42,342	1/1:24,0:26:49.94:705,50,0	1/1:5,1:25:23.16:278,23,0	1/1:6,1:26:9.02:120,9,0	0/0:24,0:24:65.96:0,66,573	0/0:17,0:16:32.95:0,33,273	0/1:34,0:34:46.51:47,0,177	0/1:14,0:13:6.89:7,0,81	0/0:16,0:15:24.27:0,24,242	0/0:24,0:23:17.97:0,18,248	0/0:13,0:11:20.95:0,21,169	1/1:4,2:26:12.51:167,13,0	1/1:3,1:19:2.66:38,3,0	1/1:2,2:19:18.06:242,18,0	1/1:1,22:24:15.05:237,15,0	1/1:5,2:31:44.47:561,44,0	1/1:21,1:22:39.15:352,39,0	1/1:0,4:4:3.01:53,3,0
chr10	22884385	.	A	AT	5264.35	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=15.924;DP=547;FS=1.171;HRun=1;HaplotypeScore=63.4945;InbreedingCoeff=0.9940;MQ=79.17;MQ0=0;MQRankSum=-2.064;QD=32.90;ReadPosRankSum=-0.076;VQSLOD=4.3888;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:42.14:0,42,587	1/1:0,9:9:23.91:303,24,0	0/0:23,0:23:55.68:0,56,758	0/0:4,0:4:12.04:0,12,166	1/1:2,29:32:76.55:1010,77,0	0/0:21,0:21:63.21:0,63,878	0/0:17,0:17:48.16:0,48,671	0/0:28,0:28:81.27:0,81,1132	0/0:17,0:17:48.16:0,48,671	1/1:2,20:22:56.38:772,56,0	1/1:1,22:23:60.04:774,60,0	0/0:22,0:22:66.22:0,66,923	0/0:39,0:39:99:0,114,1575	0/0:9,0:9:24.08:0,24,336	0/0:24,0:24:72.23:0,72,989	0/0:24,0:24:69.23:0,69,965	1/1:3,9:13:32.07:414,32,0	1/1:1,21:24:62.91:785,63,0	1/1:2,11:13:35.24:455,35,0	1/1:2,13:15:30.96:431,31,0	1/1:0,9:9:24.08:320,24,0	0/0:22,0:22:66.22:0,66,923	0/0:20,0:20:60.18:0,60,821	0/0:17,0:17:51.17:0,51,710	0/0:17,0:17:51.17:0,51,713	0/0:24,0:24:69.22:0,69,946	0/0:35,0:35:99:0,102,1402	0/0:10,0:10:30.10:0,30,419
chr10	22884827	.	CGAACTTT	C	4801.94	PASS	AB=0.545;AC=11;AF=0.196;AN=56;BaseQRankSum=11.610;DP=626;FS=1.630;HRun=0;HaplotypeScore=145.6360;InbreedingCoeff=0.8306;MQ=84.51;MQ0=0;MQRankSum=-10.412;QD=49.50;ReadPosRankSum=1.188;VQSLOD=4.7849;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:54.19:0,54,2069	0/1:2,10:12:95.63:524,0,96	0/0:23,0:23:51.18:0,51,1764	0/0:17,0:17:48.12:0,48,1346	0/0:29,0:29:57.20:0,57,2293	0/0:19,0:19:51.15:0,51,1860	0/0:22,0:22:63.22:0,63,2442	0/0:32,0:32:87.28:0,87,3005	0/0:19,0:19:54.19:0,54,1936	0/0:23,0:23:60.21:0,60,2226	0/0:17,0:17:30.09:0,30,970	0/0:43,0:43:99:0,102,3986	0/0:27,0:27:75.26:0,75,2962	0/0:30,0:30:87.30:0,87,3237	0/0:31,0:31:90.31:0,90,3544	0/0:21,0:21:57.20:0,57,2220	1/1:1,11:12:24.08:630,24,0	1/1:1,5:6:9.03:237,9,0	1/1:0,22:22:66.17:1488,66,0	1/1:4,31:35:75.25:1843,75,0	1/1:1,9:10:3.01:79,3,0	0/0:14,0:14:33.11:0,33,1329	0/0:19,0:19:45.15:0,45,1800	0/0:25,0:25:72.24:0,72,2680	0/0:26,0:26:63.22:0,63,2401	0/0:26,0:26:75.25:0,75,2789	0/0:34,0:34:99:0,99,3606	0/0:10,0:10:30.09:0,30,1115
chr10	22887354	.	A	AT	2464.11	PASS	AB=0.889;AC=19;AF=0.339;AN=56;BaseQRankSum=-5.160;DP=263;FS=0.000;HRun=4;HaplotypeScore=28.5882;InbreedingCoeff=0.7849;MQ=75.54;MQ0=0;MQRankSum=0.245;QD=27.38;ReadPosRankSum=0.180;VQSLOD=1.7713;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:27.05:0,27,294	1/1:0,2:2:3.01:41,3,0	0/0:11,0:9:12.82:0,13,154	0/0:17,0:13:12.36:0,12,173	1/1:1,10:11:24.01:305,24,0	0/0:14,0:14:30.08:0,30,340	0/0:5,0:5:15.04:0,15,170	0/0:36,0:36:96.25:0,96,1066	0/0:4,0:4:12.03:0,12,136	1/1:2,3:5:6:64,6,0	1/1:3,3:6:9.03:123,9,0	0/0:4,0:4:12.03:0,12,136	0/0:8,0:8:21.06:0,21,238	0/0:7,0:7:21.06:0,21,238	0/0:7,0:7:21.06:0,21,238	0/0:3,0:3:9.03:0,9,102	1/1:0,18:18:42.14:574,42,0	1/1:0,12:12:33.11:451,33,0	1/1:0,16:16:48.12:635,48,0	1/1:0,7:7:18.06:246,18,0	1/1:0,5:5:15.05:205,15,0	0/0:3,0:3:6.02:0,6,68	0/0:4,0:4:9.03:0,9,102	0/0:1,0:1:3.01:0,3,34	0/0:17,0:17:48.14:0,48,545	0/1:7,1:8:19.97:20,0,183	0/0:9,0:9:27.08:0,27,306	0/0:12,0:12:36.10:0,36,408
chr10	22890253	.	TTCTCTCTC	T	4961.80	PASS	AB=0.762;AC=27;AF=0.482;AN=56;BaseQRankSum=4.689;DP=656;FS=5.280;HRun=0;HaplotypeScore=178.7398;InbreedingCoeff=0.7142;MQ=63.67;MQ0=15;MQRankSum=-6.692;QD=15.90;ReadPosRankSum=3.167;VQSLOD=3.7204;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:19,1:21:6.02:105,6,0	0/0:5,0:6:6.49:0,6,208	0/0:28,0:17:0.47:0,0,1	0/0:35,0:18:0.47:0,0,1	0/0:22,0:22:9.03:0,9,278	0/1:21,7:32:38.16:707,0,38	1/1:20,5:27:17.94:268,18,0	0/0:33,0:33:1.25:0,1,3	1/1:10,4:15:15.05:315,15,0	0/0:18,0:18:30.10:0,30,876	0/0:16,0:16:18.06:0,18,445	1/1:8,5:14:15.05:340,15,0	1/1:13,1:24:32.85:298,33,0	1/1:18,4:25:23.54:466,24,0	0/0:20,0:25:12.01:0,12,208	0/0:20,0:31:36.09:0,36,676	0/0:19,0:31:9.02:0,9,242	0/0:10,0:14:12.04:0,12,347	0/0:31,0:34:22.09:0,22,372	0/0:22,0:27:3.01:0,3,103	0/0:17,0:21:6.02:0,6,167	1/1:10,5:15:15.05:335,15,0	1/1:14,6:20:12.04:260,12,0	1/1:13,6:19:5.98:66,6,0	1/1:9,12:23:27.09:599,27,0	1/1:23,10:36:33.57:681,34,0	1/1:16,5:23:21.07:448,21,0	1/1:9,3:11:3.01:75,3,0
chr10	22891133	.	T	TG	3505.18	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-11.301;DP=702;FS=0.848;HRun=6;HaplotypeScore=80.9944;InbreedingCoeff=0.9963;MQ=85.92;MQ0=0;MQRankSum=-2.566;QD=30.75;ReadPosRankSum=-0.345;VQSLOD=3.8298;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,117,1187	1/1:0,15:15:39.12:488,39,0	0/0:25,0:25:56.95:0,57,565	0/0:23,0:23:57.07:0,57,556	0/0:26,0:26:60.09:0,60,601	0/0:18,0:18:48.11:0,48,489	0/0:20,0:20:57.13:0,57,581	0/0:36,0:36:84.14:0,84,836	0/0:20,0:20:57.13:0,57,581	0/0:23,0:23:56.99:0,57,566	0/0:28,0:28:69.15:0,69,703	0/0:40,0:40:99:0,111,1124	0/0:40,0:40:99:0,102,1033	0/0:47,0:47:99:0,132,1337	0/0:33,0:33:99:0,99,1010	0/0:29,0:29:72.15:0,72,734	1/1:2,21:23:60.19:755,60,0	1/1:1,5:6:17.99:206,18,0	1/1:1,17:18:51.16:640,51,0	1/1:2,24:26:60.15:737,60,0	1/1:3,23:26:54.17:679,54,0	0/0:20,0:20:54.11:0,54,544	0/0:17,0:17:48.11:0,48,489	0/0:10,0:10:24.05:0,24,244	0/0:29,0:29:75.17:0,75,765	0/0:21,0:22:62.16:0,62,611	0/0:32,0:32:93.17:0,93,933	0/0:6,0:6:18.04:0,18,183
chr10	22892093	.	CTG	C	502.94	PASS	AB=0.793;AC=9;AF=0.161;AN=56;BaseQRankSum=10.128;DP=478;FS=25.567;HRun=0;HaplotypeScore=138.3598;InbreedingCoeff=-0.2243;MQ=55.22;MQ0=0;MQRankSum=-7.407;QD=2.83;ReadPosRankSum=0.157;VQSLOD=0.9506;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:58.08:0,58,1081	0/0:7,1:8:3.75:0,4,214	0/0:17,0:10:18.97:0,19,291	0/0:11,0:7:31.02:0,31,470	0/0:14,4:18:0.45:0,0,267	0/1:17,2:19:17.97:18,0,547	0/0:14,1:15:29.32:0,29,530	0/0:20,0:20:53.02:0,53,854	0/0:15,1:16:2.66:0,3,650	0/1:7,4:11:79.62:80,0,163	0/1:12,7:19:40.45:40,0,300	0/0:18,0:18:40.84:0,41,755	0/1:13,2:15:6.45:6,0,482	0/0:23,1:24:6.84:0,7,936	0/0:21,1:22:24.31:0,24,565	0/0:21,0:21:36.28:0,36,822	0/1:12,1:13:5.42:5,0,343	0/0:4,0:4:12.04:0,12,243	0/0:11,0:11:31.54:0,32,515	0/1:24,9:33:99:135,0,737	0/0:10,0:10:24.08:0,24,458	0/1:19,9:28:99:99,0,594	0/1:8,8:16:99:109,0,192	0/0:11,0:11:6.38:0,6,152	0/1:16,8:24:99:142,0,586	0/0:26,2:28:11.76:0,12,1119	0/0:21,0:21:55.07:0,55,1038	0/0:4,0:4:12.04:0,12,243
chr10	22892103	.	TC	T	5681.61	PASS	AB=0.769;AC=39;AF=0.696;AN=56;BaseQRankSum=-5.494;DP=567;FS=14.633;HRun=9;HaplotypeScore=135.5813;InbreedingCoeff=0.5475;MQ=58.49;MQ0=0;MQRankSum=-0.731;QD=12.85;ReadPosRankSum=-0.786;VQSLOD=2.8850;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,12:21:32.99:302,33,0	0/1:5,3:8:2.18:74,0,2	0/0:27,0:18:32.31:0,32,358	0/0:13,0:9:29.11:0,29,286	0/0:20,0:20:9.17:0,9,197	1/1:10,15:25:25.15:295,25,0	1/1:10,9:19:16.66:229,17,0	0/1:19,3:22:20.47:63,0,20	1/1:4,14:18:24.24:336,24,0	0/0:15,0:15:13.98:0,14,164	0/1:22,0:22:24.46:24,0,155	1/1:9,12:21:6.51:258,7,0	1/1:8,11:19:22.29:305,22,0	1/1:9,17:26:17.50:430,18,0	0/0:26,0:26:50.28:0,50,449	0/0:22,0:24:50.65:0,51,511	1/1:6,11:17:14.67:260,15,0	1/1:1,4:5:9.68:106,10,0	1/1:4,9:13:3.57:216,4,0	1/1:21,18:39:72.71:589,73,0	0/1:4,10:14:6.20:193,0,6	1/1:16,14:30:43.99:445,44,0	1/1:15,5:20:26.84:199,27,0	1/1:2,11:13:20.04:171,20,0	1/1:19,10:29:23.32:328,23,0	0/1:16,18:34:23.97:466,0,24	1/1:12,11:23:11.58:282,12,0	1/1:0,4:4:12.01:110,12,0
chr10	22892752	.	G	GT	17935.05	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=-17.036;DP=657;FS=1.399;HRun=2;HaplotypeScore=56.2379;InbreedingCoeff=0.9992;MQ=82.95;MQ0=0;MQRankSum=-3.365;QD=39.42;ReadPosRankSum=0.811;VQSLOD=5.2949;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,19:20:51.17:735,51,0	1/1:0,10:10:30.10:432,30,0	0/0:15,0:15:42.99:0,43,494	0/0:23,0:23:56.83:0,57,652	0/0:41,0:41:99:0,120,1486	1/1:0,34:34:87.29:1253,87,0	1/1:0,16:16:39.13:562,39,0	1/1:0,38:38:99:1624,114,0	1/1:0,19:19:54.18:778,54,0	0/0:32,0:32:96.30:0,96,1189	0/0:37,0:37:99:0,102,1263	1/1:0,20:20:57.19:821,57,0	1/1:2,28:30:72.24:1037,72,0	1/1:0,12:12:36.12:518,36,0	0/0:33,0:33:96.30:0,96,1188	0/0:21,0:21:63.20:0,63,781	1/1:0,17:17:51.17:734,51,0	1/1:0,11:11:27.09:389,27,0	1/1:2,19:21:60.20:861,60,0	1/1:0,30:30:87.26:1231,87,0	1/1:0,17:17:51.17:735,51,0	1/1:0,16:16:39.09:538,39,0	1/1:1,22:23:63.21:907,63,0	1/1:0,11:11:33.11:475,33,0	1/1:0,28:28:81.27:1167,81,0	1/1:2,31:33:62.08:1282,62,0	1/1:1,36:37:99:1512,105,0	1/1:0,12:12:24.08:346,24,0
chr10	22892923	.	TG	T	15525.18	PASS	AB=1.000;AC=49;AF=0.875;AN=56;BaseQRankSum=5.775;DP=546;FS=1.002;HRun=2;HaplotypeScore=59.8432;InbreedingCoeff=0.8568;MQ=74.47;MQ0=0;MQRankSum=-2.343;QD=32.48;ReadPosRankSum=2.547;VQSLOD=4.6795;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,17:17:45.15:581,45,0	1/1:0,9:9:18.06:233,18,0	0/0:14,0:14:26.20:0,26,336	0/1:5,0:5:8.03:8,0,54	1/1:1,21:22:60.19:774,60,0	1/1:2,24:26:54.89:802,55,0	1/1:0,17:17:45.15:582,45,0	1/1:2,25:27:72.21:905,72,0	1/1:0,16:16:45.15:581,45,0	1/1:1,14:15:39.05:432,39,0	1/1:1,18:19:50.99:615,51,0	1/1:0,20:20:57.19:737,57,0	1/1:1,23:24:57.03:720,57,0	1/1:1,21:22:54.18:697,54,0	0/0:30,0:30:82.02:0,82,1173	0/0:24,0:24:66.97:0,67,978	1/1:0,22:22:48.16:620,48,0	1/1:0,12:12:33.11:426,33,0	1/1:5,14:19:54.15:662,54,0	1/1:1,29:30:78.02:928,78,0	1/1:0,8:8:21.07:272,21,0	1/1:0,18:18:53.92:631,54,0	1/1:1,25:26:63.17:796,63,0	1/1:0,19:19:45.15:582,45,0	1/1:1,19:20:48.16:621,48,0	1/1:1,21:22:58.99:750,59,0	1/1:3,32:35:93.82:1278,94,0	1/1:1,7:8:24.04:292,24,0
chr10	22893838	.	GT	G	9955.02	PASS	AB=0.920;AC=43;AF=0.768;AN=56;BaseQRankSum=11.663;DP=586;FS=0.774;HRun=9;HaplotypeScore=60.6225;InbreedingCoeff=0.9046;MQ=73.27;MQ0=0;MQRankSum=0.443;QD=22.12;ReadPosRankSum=-1.806;VQSLOD=4.9799;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,18:21:48.02:439,48,0	1/1:3,8:11:23.99:220,24,0	0/0:10,0:10:3.76:0,4,129	0/0:9,0:9:11.39:0,11,106	0/0:35,0:35:90.27:0,90,1039	1/1:1,14:15:39.02:357,39,0	1/1:2,14:16:39.02:357,39,0	1/1:4,22:26:65.97:591,66,0	1/1:1,18:19:42.02:384,42,0	0/0:18,0:18:51.14:0,51,574	0/1:21,2:23:0.75:1,0,500	1/1:5,13:18:39.02:357,39,0	1/1:0,26:26:75.04:686,75,0	1/1:5,30:35:90.04:824,90,0	0/0:39,0:39:99:0,105,1210	0/0:25,0:25:72.21:0,72,830	1/1:1,21:22:57.03:522,57,0	1/1:1,13:14:38.99:349,39,0	1/1:4,18:22:54:488,54,0	1/1:0,20:20:57.02:521,57,0	1/1:0,10:10:30.02:275,30,0	1/1:3,16:19:48.02:439,48,0	1/1:2,27:29:81.04:741,81,0	1/1:3,18:21:13.41:377,13,0	1/1:1,25:26:66.04:604,66,0	1/1:1,26:27:44.98:655,45,0	1/1:0,21:21:60.03:549,60,0	1/1:1,8:9:24.01:220,24,0
chr10	22893924	.	T	TA	4950.89	PASS	AB=1.000;AC=47;AF=0.839;AN=56;BaseQRankSum=7.566;DP=461;FS=1.073;HRun=2;HaplotypeScore=106.8542;InbreedingCoeff=0.8407;MQ=69.58;MQ0=0;MQRankSum=-3.525;QD=12.63;ReadPosRankSum=5.156;VQSLOD=3.8330;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:18,1:19:26.77:176,27,0	1/1:6,1:7:17.13:107,17,0	0/0:17,0:15:35.93:0,36,387	0/0:17,0:14:27.87:0,28,342	1/1:3,20:23:46.83:671,47,0	1/1:21,0:21:26.56:190,27,0	1/1:15,1:16:34.70:183,35,0	1/1:24,0:24:30.21:165,30,0	1/1:19,0:19:42.30:213,42,0	1/1:1,21:22:56.89:576,57,0	1/1:3,14:17:4.79:422,5,0	1/1:9,1:10:12.34:137,12,0	1/1:15,0:15:32.27:175,32,0	1/1:19,0:19:44.31:215,44,0	0/0:17,0:17:51.14:0,51,617	0/0:18,0:18:54.17:0,54,669	1/1:18,0:16:23.20:119,23,0	1/1:9,0:9:13.66:71,14,0	1/1:16,0:16:24.12:129,24,0	1/1:22,0:22:46.41:216,46,0	1/1:4,0:3:5.47:25,5,0	1/1:9,0:9:21.33:119,21,0	1/1:14,0:14:31:172,31,0	1/1:9,0:9:20.26:93,20,0	1/1:23,0:23:43.63:213,44,0	1/1:21,0:21:40.94:208,41,0	1/1:27,0:27:58.76:340,59,0	0/1:8,0:8:2.11:17,0,2
chr10	22893928	.	C	CTT	10432.86	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=5.501;DP=488;FS=2.534;HRun=9;HaplotypeScore=108.5459;InbreedingCoeff=0.9393;MQ=65.30;MQ0=2;MQRankSum=-3.927;QD=25.02;ReadPosRankSum=2.429;VQSLOD=4.5751;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:12,8:22:33.64:422,34,0	1/1:1,1:6:14.15:141,14,0	0/0:18,0:14:35.69:0,36,346	0/0:15,0:12:26.51:0,27,263	1/1:25,0:25:10.93:144,11,0	1/1:5,15:21:50.38:745,50,0	1/1:4,11:16:35.48:514,35,0	1/1:17,11:28:43.38:628,43,0	1/1:5,14:19:42.10:620,42,0	1/1:21,0:21:22.57:123,23,0	1/1:19,0:19:18.16:97,18,0	1/1:2,8:10:27.09:404,27,0	1/1:6,10:16:37.68:544,38,0	1/1:7,15:22:57.18:840,57,0	0/0:18,0:18:39.06:0,39,415	0/0:18,0:18:48.10:0,48,511	1/1:8,1:19:25.45:328,25,0	1/1:2,0:8:16.84:149,17,0	1/1:9,2:18:27.04:272,27,0	1/1:14,2:28:57.12:630,57,0	1/1:0,2:3:6.02:75,6,0	1/1:2,6:9:21.07:306,21,0	1/1:5,10:15:39.12:541,39,0	1/1:4,7:11:24.07:348,24,0	1/1:7,15:23:51.17:758,51,0	1/1:7,12:20:48.15:704,48,0	1/1:7,16:25:66.21:959,66,0	1/1:8,2:10:12.01:140,12,0
chr10	22896962	.	T	TA	19278.53	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-18.086;DP=771;FS=19.618;HRun=0;HaplotypeScore=70.4873;InbreedingCoeff=0.9977;MQ=81.14;MQ0=1;MQRankSum=-4.617;QD=43.42;ReadPosRankSum=2.898;VQSLOD=2.9944;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,35:37:96.33:1534,96,0	0/0:13,0:13:39.12:0,39,530	0/0:21,0:21:63.20:0,63,849	0/0:22,0:22:61.99:0,62,784	0/0:30,0:30:90.27:0,90,1224	1/1:0,36:36:99:1678,105,0	1/1:0,28:28:84.29:1343,84,0	1/1:2,34:36:99:1609,102,0	1/1:0,28:28:75.26:1199,75,0	0/0:41,0:41:99:0,120,1664	0/0:22,0:22:60.19:0,60,822	1/1:0,23:23:69.24:1103,69,0	1/1:2,27:30:66.22:1045,66,0	1/1:0,31:31:90.31:1426,90,0	0/0:27,0:26:72.24:0,72,1005	0/0:37,0:37:99:0,108,1425	0/0:18,0:18:54.15:0,54,735	0/0:18,0:18:54.18:0,54,752	0/0:30,0:30:90.26:0,90,1219	0/0:27,0:27:81.26:0,81,1119	0/0:21,0:21:63.18:0,63,844	1/1:0,23:23:66.23:1055,66,0	1/1:0,26:26:72.25:1150,72,0	1/1:1,33:34:93.32:1486,93,0	1/1:1,36:37:93.32:1485,93,0	1/1:2,36:38:30.42:1584,30,0	1/1:0,31:31:84.29:1343,84,0	1/1:0,6:6:15.05:239,15,0
chr10	22897162	.	CTCTCTG	C	2600.47	PASS	AC=10;AF=0.185;AN=54;BaseQRankSum=10.109;DP=703;FS=3.392;HRun=0;HaplotypeScore=139.5449;InbreedingCoeff=0.9980;MQ=59.72;MQ0=12;MQRankSum=-8.324;QD=29.89;ReadPosRankSum=0.666;VQSLOD=3.1547;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:96.02:0,96,2700	1/1:3,13:16:30.10:619,30,0	0/0:57,0:29:39.63:0,40,941	0/0:41,0:21:30.24:0,30,544	0/0:14,0:14:30.10:0,30,941	0/0:23,0:23:63.20:0,63,1702	0/0:24,0:24:57.20:0,57,1776	0/0:32,0:31:66.21:0,66,1557	0/0:30,0:30:78.25:0,78,2183	0/0:21,0:21:51.17:0,51,1574	0/0:15,0:15:36.11:0,36,825	0/0:27,0:27:63.64:0,64,2043	0/0:30,0:30:81.26:0,81,2178	0/0:36,0:36:87.28:0,87,2673	0/0:28,0:28:72.25:0,72,2329	0/0:37,0:37:93.32:0,93,3005	1/1:9,19:28:21.07:423,21,0	1/1:11,3:14:24:383,24,0	1/1:3,12:14:33.07:539,33,0	1/1:0,14:14:42.14:809,42,0	./.	0/0:11,0:11:33.11:0,33,888	0/0:13,0:13:33.11:0,33,877	0/0:22,0:22:45.07:0,45,1228	0/0:25,0:25:63.22:0,63,1839	0/0:24,0:24:54.19:0,54,1538	0/0:33,0:31:84.25:0,84,2314	0/0:21,0:21:45.15:0,45,1297
chr10	22898610	.	CATAT	C	385.48	PASS	AB=1.000;AC=9;AF=0.214;AN=42;BaseQRankSum=2.935;DP=249;FS=9.618;HRun=0;HaplotypeScore=63.1148;InbreedingCoeff=0.4132;MQ=73.24;MQ0=9;MQRankSum=4.870;QD=4.76;ReadPosRankSum=1.214;VQSLOD=0.2873;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:4,0:4:12.04:0,12,196	0/1:12,0:9:3.02:3,0,17	0/1:13,0:7:1.46:15,0,1	1/1:1,17:18:3.01:34,3,0	./.	./.	0/0:27,0:26:54.14:0,54,700	0/0:2,0:2:0:0,0,0	1/1:11,8:16:24.08:368,24,0	1/1:12,1:13:3.01:44,3,0	0/0:5,0:3:3:0,3,25	0/0:3,0:2:3.01:0,3,49	0/0:3,0:3:3.01:0,3,50	0/0:23,0:23:48.16:0,48,800	0/0:10,0:10:21.07:0,21,348	0/0:17,0:17:26.27:0,26,342	0/0:16,0:16:32.84:0,33,455	0/0:12,0:12:29.46:0,29,470	0/0:17,0:17:45.15:0,45,727	0/0:7,0:7:21.07:0,21,341	./.	./.	./.	0/0:4,0:3:5.38:0,5,58	0/1:5,0:5:20.96:43,0,21	0/0:5,0:5:6.02:0,6,81	./.
chr10	22898620	.	TATATAC	T	455.77	PASS	AB=0.983;AC=10;AF=0.238;AN=42;BaseQRankSum=3.032;DP=267;FS=0.000;HRun=0;HaplotypeScore=76.2997;InbreedingCoeff=0.1568;MQ=64.52;MQ0=17;MQRankSum=2.734;QD=5.18;ReadPosRankSum=-0.289;VQSLOD=1.5047;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/1:5,0:5:1.93:2,0,181	0/1:8,0:6:3.02:3,0,17	0/1:12,0:5:1.46:15,0,1	0/1:20,0:20:14.80:47,0,15	./.	./.	0/0:25,0:24:55.03:0,55,702	0/0:5,0:4:0:0,0,0	1/1:16,0:13:27.06:373,27,0	1/1:4,13:16:3.01:62,3,0	0/0:5,0:3:3:0,3,25	0/0:3,0:2:3.01:0,3,49	0/0:3,0:3:3.01:0,3,50	0/0:26,0:26:60.12:0,60,1172	0/0:13,0:13:33.08:0,33,514	0/0:18,0:18:0.88:0,1,332	0/0:14,0:14:33:0,33,482	0/0:16,0:14:28.91:0,29,460	0/0:20,0:20:45.15:0,45,748	0/0:13,0:12:5.97:0,6,324	./.	./.	./.	0/1:6,0:5:18.15:18,0,44	0/1:3,0:3:18.04:57,0,18	0/0:3,0:3:6.02:0,6,81	./.
chr10	22898624	.	TAC	T	206.37	PASS	AB=0.979;AC=22;AF=0.846;AN=26;BaseQRankSum=1.197;DP=283;FS=1.397;HRun=0;HaplotypeScore=62.0924;InbreedingCoeff=-0.2502;MQ=59.03;MQ0=25;MQRankSum=-0.817;QD=1.04;ReadPosRankSum=-0.209;VQSLOD=1.4867;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	1/1:5,0:5:2.97:20,3,0	./.	./.	0/1:21,0:21:16.45:16,0,18	./.	./.	./.	./.	1/1:17,0:13:2.68:23,3,0	1/1:16,0:15:2.88:15,3,0	./.	./.	./.	0/1:26,1:27:4.93:5,0,206	0/1:13,0:13:40.98:41,0,42	0/1:18,0:19:21.54:23,0,22	1/1:17,0:17:2.97:35,3,0	1/1:17,0:16:4.66:19,5,0	1/1:17,4:21:3.01:32,3,0	1/1:14,0:12:5.92:38,6,0	./.	./.	./.	1/1:5,0:5:2.84:14,3,0	1/1:4,0:3:2.96:19,3,0	./.	./.
chr10	22900069	.	C	CGTGTGT	3199.50	PASS	AB=0.931;AC=36;AF=0.692;AN=52;BaseQRankSum=-4.160;DP=653;FS=11.993;HRun=0;HaplotypeScore=139.7900;InbreedingCoeff=0.4881;MQ=63.14;MQ0=31;MQRankSum=-1.289;QD=7.16;ReadPosRankSum=-1.179;VQSLOD=1.8746;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:34,0:33:21.07:446,21,0	1/1:8,0:8:8.59:75,9,0	./.	./.	0/0:15,0:15:8.97:0,9,104	1/1:19,0:19:21.07:306,21,0	1/1:16,0:21:0.47:1,0,0	1/1:22,0:21:6.01:62,6,0	1/1:12,5:16:9.03:246,9,0	0/0:16,0:17:4.40:0,4,92	0/0:12,0:12:7.26:0,7,77	1/1:35,0:34:20.60:344,21,0	1/1:14,5:25:6.02:130,6,0	1/1:22,1:23:5.56:186,6,0	0/0:24,0:24:9.03:0,9,180	0/1:20,0:21:11.42:11,0,92	0/1:41,0:49:99:137,0,144	0/0:16,0:21:8.67:0,9,125	1/1:14,0:14:3:26,3,0	0/0:14,0:16:0.70:0,1,2	1/1:42,0:39:6.02:84,6,0	1/1:18,0:18:9.03:152,9,0	0/0:18,1:19:0:0,0,0	1/1:12,0:25:9.03:115,9,0	1/1:25,0:24:12.04:259,12,0	1/1:26,0:24:23.58:408,24,0	1/1:17,0:17:21.01:321,21,0	1/1:4,0:3:3.01:43,3,0
chr10	22901427	.	AT	A	8644.96	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=11.513;DP=540;FS=3.248;HRun=9;HaplotypeScore=56.5647;InbreedingCoeff=0.9628;MQ=72.26;MQ0=0;MQRankSum=-0.806;QD=23.82;ReadPosRankSum=1.422;VQSLOD=5.8295;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,33:36:96.04:879,96,0	0/0:10,0:10:27.08:0,27,309	0/0:13,0:13:29.37:0,29,284	0/0:4,1:5:0.62:0,1,31	1/1:1,30:31:87.04:796,87,0	1/1:4,14:18:39.01:357,39,0	1/1:0,15:15:42.02:384,42,0	1/1:2,19:21:57.03:522,57,0	1/1:0,15:15:42.02:384,42,0	1/1:3,22:25:66.03:604,66,0	1/1:0,13:12:36.02:330,36,0	1/1:4,14:18:39:357,39,0	1/1:2,24:26:72.04:659,72,0	1/1:0,17:17:48.03:439,48,0	0/0:20,0:21:57:0,57,637	0/0:27,1:28:53.77:0,54,872	0/0:18,0:19:47.96:0,48,524	0/0:20,0:20:54.13:0,54,609	0/0:27,1:29:40.80:0,41,763	0/0:21,0:21:60.18:0,60,691	0/0:11,0:11:30.09:0,30,345	1/1:1,12:13:36.02:329,36,0	1/1:3,15:18:39.02:357,39,0	1/1:3,22:25:63.02:577,63,0	1/1:2,11:14:35.05:308,35,0	1/1:3,21:24:62.98:561,63,0	1/1:3,22:26:65.06:583,65,0	1/1:0,8:8:24.01:220,24,0
chr10	22904188	.	TA	T	12405.93	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=9.017;DP=515;FS=3.859;HRun=5;HaplotypeScore=55.0957;InbreedingCoeff=0.9480;MQ=72.98;MQ0=0;MQRankSum=-2.030;QD=29.82;ReadPosRankSum=1.571;VQSLOD=5.4919;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,21:22:59.66:655,60,0	1/1:0,5:5:15.04:170,15,0	0/0:10,0:11:21.06:0,21,275	0/0:4,0:4:6.02:0,6,82	0/0:31,0:31:93.29:0,93,1253	1/1:0,26:26:72.21:817,72,0	1/1:2,9:11:27.08:306,27,0	1/1:6,26:32:78.19:865,78,0	1/1:1,16:17:45.10:497,45,0	0/0:32,0:32:93.30:0,93,1248	0/0:21,0:21:60.19:0,60,805	1/1:0,24:24:66.19:749,66,0	1/1:0,22:22:63.18:715,63,0	1/1:1,17:18:51.14:579,51,0	1/1:2,17:19:45.11:511,45,0	1/1:1,24:25:69.20:783,69,0	1/1:2,15:17:45.13:510,45,0	1/1:1,15:16:42.12:476,42,0	1/1:0,22:22:66.17:731,66,0	1/1:1,21:22:63.18:715,63,0	1/1:1,6:7:18.05:204,18,0	1/1:2,6:8:18.05:204,18,0	1/1:3,16:19:39.11:442,39,0	1/1:0,4:4:12.03:136,12,0	1/1:2,15:17:39.11:442,39,0	1/1:2,16:18:10.09:504,10,0	1/1:0,38:38:99:1157,102,0	1/1:0,7:7:21.06:238,21,0
chr10	22904476	.	G	GTATATATATATATA	8155.01	PASS	AB=1.000;AC=40;AF=0.800;AN=50;BaseQRankSum=3.154;DP=238;FS=2.294;HRun=0;HaplotypeScore=92.3676;InbreedingCoeff=0.5460;MQ=73.41;MQ0=0;MQRankSum=-7.716;QD=46.07;ReadPosRankSum=-0.547;VQSLOD=4.4863;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:3,0:3:0:0,0,0	1/1:0,0:1:3.01:64,3,0	0/0:5,0:5:2.64:0,3,15	0/1:13,0:9:0:0,0,0	0/0:31,0:31:90.20:0,90,2948	1/1:2,4:7:9.03:616,9,0	1/1:4,0:4:3.01:205,3,0	1/1:36,0:36:81.17:2877,81,0	1/1:6,0:6:5.99:50,6,0	0/0:10,0:10:21.05:0,21,755	0/0:15,0:15:45.05:0,45,1242	1/1:4,4:8:12.04:722,12,0	1/1:3,2:8:3.01:205,3,0	1/1:3,0:3:3.01:205,3,0	1/1:1,0:6:9.03:191,9,0	1/1:2,0:6:6.02:128,6,0	1/1:6,0:9:9.03:191,9,0	1/1:3,0:9:15.05:301,15,0	1/1:2,0:7:21.07:558,21,0	1/1:2,0:7:6.02:127,6,0	./.	./.	1/1:3,0:3:3:25,3,0	./.	1/1:4,5:16:12.04:659,12,0	1/1:3,0:3:3.01:79,3,0	1/1:5,5:17:15.05:904,15,0	1/1:5,0:5:5.99:48,6,0
chr10	22904845	.	ATAT	A	14918.24	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=9.685;DP=538;FS=1.508;HRun=0;HaplotypeScore=102.5915;InbreedingCoeff=0.9776;MQ=70.73;MQ0=0;MQRankSum=-3.929;QD=33.37;ReadPosRankSum=4.866;VQSLOD=5.4019;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,15:17:39.13:574,39,0	1/1:0,3:3:9.03:135,9,0	0/0:12,0:12:17.95:0,18,321	0/0:8,0:8:17.68:0,18,192	0/0:25,0:25:69.23:0,69,1410	1/1:5,28:33:69.23:1031,69,0	1/1:2,11:13:33.06:448,33,0	1/1:12,34:46:99:1498,102,0	1/1:2,18:20:48.16:698,48,0	0/0:19,0:19:54.19:0,54,1119	0/0:27,0:27:72.23:0,72,1470	1/1:2,21:23:54.16:785,54,0	1/1:2,24:26:69.19:997,69,0	1/1:2,20:22:54.18:799,54,0	1/1:4,17:21:42.14:628,42,0	1/1:5,24:29:60.20:897,60,0	1/1:3,21:24:54.18:807,54,0	1/1:4,11:15:30.10:425,30,0	1/1:3,11:14:33.11:481,33,0	1/1:4,7:11:18.06:269,18,0	1/1:0,10:10:30.10:448,30,0	1/1:2,6:8:18.06:269,18,0	1/1:2,15:17:36.12:536,36,0	1/1:3,13:16:32.97:483,33,0	1/1:2,20:22:45.15:663,45,0	1/1:2,22:24:63.20:918,63,0	1/1:2,24:26:57.19:842,57,0	1/1:0,7:7:21.07:289,21,0
chr10	22905688	.	AT	A	13199.41	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-10.919;DP=696;FS=1.661;HRun=9;HaplotypeScore=89.3621;InbreedingCoeff=0.9939;MQ=76.71;MQ0=0;MQRankSum=-3.429;QD=23.70;ReadPosRankSum=1.342;VQSLOD=5.4288;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,25:27:75.04:686,75,0	1/1:1,12:13:33.02:302,33,0	0/0:17,0:18:37.80:0,38,390	0/0:9,0:9:17.39:0,17,164	0/0:4,0:38:94.11:0,94,492	1/1:1,16:17:48.02:439,48,0	1/1:1,12:13:36.02:329,36,0	1/1:5,39:45:99:1044,116,0	1/1:5,23:28:69.03:631,69,0	0/0:5,0:41:99:0,105,547	0/0:3,0:33:85.48:0,85,444	1/1:4,20:24:54.01:494,54,0	1/1:3,34:38:98.08:885,98,0	1/1:3,24:27:69.03:631,69,0	1/1:3,19:22:54.03:494,54,0	1/1:0,29:29:81.04:741,81,0	1/1:2,14:16:42.02:384,42,0	1/1:4,13:17:39.02:357,39,0	1/1:5,13:18:39.02:357,39,0	1/1:2,16:18:48.02:439,48,0	1/1:0,14:14:36.02:329,36,0	1/1:2,22:24:62.98:568,63,0	1/1:1,29:30:84.05:769,84,0	1/1:0,16:16:42.02:384,42,0	1/1:4,32:36:90.04:824,90,0	1/1:3,32:35:96.03:873,96,0	1/1:1,44:45:99:1098,120,0	1/1:0,5:5:15.01:137,15,0
chr10	22907765	.	G	GC	25746.44	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-10.473;DP=625;FS=1.155;HRun=0;HaplotypeScore=53.8874;InbreedingCoeff=0.9897;MQ=92.34;MQ0=0;MQRankSum=-11.139;QD=45.09;ReadPosRankSum=6.157;VQSLOD=4.2844;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,22:23:60.20:959,60,0	1/1:0,8:8:21.07:336,21,0	0/0:24,0:24:69.21:0,69,922	0/0:29,0:30:64.90:0,65,1021	1/1:0,26:26:66.23:1055,66,0	1/1:1,33:34:96.33:1535,96,0	1/1:0,17:17:51.17:816,51,0	1/1:3,32:35:99:1503,99,0	1/1:1,17:18:48.16:767,48,0	1/1:3,22:25:69.23:1089,69,0	1/1:0,13:13:36.12:575,36,0	1/1:1,16:17:45.15:719,45,0	1/1:0,32:32:93.32:1485,93,0	1/1:1,19:20:57.19:911,57,0	1/1:0,21:21:60.20:959,60,0	1/1:0,19:19:54.18:863,54,0	1/1:0,19:19:51.17:815,51,0	1/1:0,19:19:57.19:911,57,0	1/1:3,19:22:63.21:1006,63,0	1/1:0,31:31:90.31:1439,90,0	1/1:0,38:38:99:1774,111,0	1/1:1,15:16:45.15:720,45,0	1/1:0,21:21:63.21:1007,63,0	1/1:0,19:19:57.19:911,57,0	1/1:0,26:26:75.26:1199,75,0	1/1:0,14:14:42.14:669,42,0	1/1:2,30:32:93.32:1481,93,0	1/1:0,5:5:15.05:240,15,0
chr10	22909753	.	TG	T	4705.02	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=13.781;DP=810;FS=4.396;HRun=1;HaplotypeScore=73.6048;InbreedingCoeff=0.9993;MQ=76.53;MQ0=0;MQRankSum=-0.763;QD=40.56;ReadPosRankSum=1.013;VQSLOD=5.5165;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:63.19:0,63,976	0/0:14,0:14:42.14:0,42,667	0/0:23,0:23:69.22:0,69,1063	0/0:13,0:13:26.06:0,26,513	1/1:0,35:35:99:1469,105,0	0/0:34,0:34:99:0,102,1602	0/0:20,0:20:60.19:0,60,928	0/0:42,0:42:99:0,123,1901	0/0:17,0:17:51.17:0,51,806	1/1:0,37:37:99:1516,111,0	1/1:0,44:44:99:1721,123,0	0/0:27,0:27:78.25:0,78,1224	0/0:26,0:26:78.27:0,78,1234	0/0:38,0:38:99:0,114,1823	0/0:41,0:41:99:0,123,1921	0/0:27,0:27:81.28:0,81,1293	0/0:32,0:32:87.28:0,87,1351	0/0:17,0:17:48.16:0,48,764	0/0:25,0:25:72.25:0,72,1150	0/0:38,0:38:99:0,114,1791	0/0:29,0:29:84.29:0,84,1340	0/0:38,0:38:99:0,114,1820	0/0:36,0:36:99:0,108,1720	0/0:24,0:24:72.25:0,72,1146	0/0:32,0:32:96.33:0,96,1533	0/0:31,1:32:54.35:0,54,1444	0/0:36,0:36:99:0,108,1726	0/0:10,0:10:30.10:0,30,479
chr10	22909922	.	AC	A	3905.85	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=11.895;DP=709;FS=5.677;HRun=1;HaplotypeScore=68.7904;InbreedingCoeff=0.9986;MQ=69.88;MQ0=0;MQRankSum=-1.273;QD=39.86;ReadPosRankSum=1.619;VQSLOD=4.3865;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:60.19:0,60,935	0/0:10,0:10:30.10:0,30,480	0/0:11,0:11:33.11:0,33,518	0/0:19,0:17:51.13:0,51,770	1/1:0,37:37:99:1423,105,0	0/0:35,0:35:99:0,105,1679	0/0:18,0:18:54.18:0,54,863	0/0:45,0:45:99:0,132,2098	0/0:22,0:22:66.23:0,66,1055	1/1:1,30:31:93.31:1288,93,0	1/1:0,30:30:87.25:1195,87,0	0/0:36,0:36:99:0,108,1726	0/0:30,0:30:90.28:0,90,1392	0/0:27,0:27:81.24:0,81,1246	0/0:39,0:39:99:0,117,1868	0/0:29,0:29:87.27:0,87,1363	0/0:21,0:21:60.68:0,61,958	0/0:16,0:16:45.07:0,45,688	0/0:22,0:22:60.18:0,60,931	0/0:27,0:27:81.25:0,81,1236	0/0:20,0:20:60.19:0,60,931	0/0:22,0:22:60.20:0,60,959	0/0:31,0:31:93.30:0,93,1462	0/0:16,0:16:48.16:0,48,767	0/0:29,0:29:87.30:0,87,1378	0/0:22,1:23:27.25:0,27,985	0/0:35,0:35:99:0,105,1674	0/0:8,0:8:24.08:0,24,366
chr10	22910091	.	G	GA	16129.90	PASS	AB=1.000;AC=53;AF=0.946;AN=56;BaseQRankSum=-5.523;DP=567;FS=8.484;HRun=7;HaplotypeScore=49.3148;InbreedingCoeff=0.5490;MQ=78.27;MQ0=0;MQRankSum=-5.312;QD=29.01;ReadPosRankSum=2.875;VQSLOD=5.2271;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,14:15:39.12:471,39,0	1/1:2,9:11:24.07:290,24,0	0/1:16,0:16:11.06:11,0,131	0/0:11,0:11:23.42:0,23,210	1/1:4,27:31:84.26:1012,84,0	1/1:4,22:26:63.19:761,63,0	1/1:0,10:10:27.08:326,27,0	1/1:3,28:31:84.23:990,84,0	1/1:2,15:17:33.10:399,33,0	1/1:3,33:36:99:1181,99,0	1/1:4,28:33:61.21:978,61,0	1/1:2,17:19:45.14:544,45,0	1/1:2,19:21:51.16:616,51,0	1/1:3,16:19:39.12:471,39,0	1/1:7,21:28:64.08:760,64,0	1/1:3,19:22:57.17:689,57,0	1/1:2,13:15:42.04:488,42,0	1/1:1,19:20:54.16:644,54,0	1/1:3,9:12:27.08:326,27,0	1/1:0,35:36:99:1230,101,0	1/1:0,6:6:18.06:217,18,0	1/1:2,15:17:45.14:543,45,0	1/1:4,14:18:7.13:370,7,0	1/1:0,11:11:30.09:362,30,0	1/1:3,18:21:42.13:507,42,0	1/1:2,24:27:75.10:884,75,0	1/1:4,23:27:63.06:761,63,0	1/1:2,9:11:1.12:297,1,0
chr10	22910328	.	GGTGTGCGTGT	G	3794.60	PASS	AB=0.974;AC=24;AF=0.429;AN=56;BaseQRankSum=-9.552;DP=624;FS=1.389;HRun=0;HaplotypeScore=188.0876;InbreedingCoeff=-0.3249;MQ=69.14;MQ0=18;MQRankSum=0.033;QD=9.01;ReadPosRankSum=0.011;VQSLOD=2.7370;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:21,0:24:83.96:171,0,84	0/1:6,0:6:18.94:19,0,82	0/0:66,0:28:49.72:0,50,463	0/0:46,0:22:26.51:0,27,257	0/0:22,0:22:3.01:0,3,77	0/1:17,0:17:10.21:10,0,66	0/1:15,0:16:3.96:4,0,121	1/1:25,0:24:31.21:427,31,0	0/1:17,0:17:99:100,0,146	0/1:26,0:25:99:233,0,1085	0/1:22,0:22:99:124,0,683	0/0:21,0:21:15.04:0,15,163	0/1:16,0:15:78.37:78,0,301	0/1:14,0:14:98.20:98,0,139	1/1:11,2:14:32.88:455,33,0	1/1:3,19:23:18.06:556,18,0	0/1:29,0:30:99:291,0,868	0/1:29,0:27:99:147,0,643	0/1:20,0:19:99:150,0,552	0/1:21,0:20:99:133,0,180	0/1:37,0:37:99:258,0,441	0/1:22,0:24:23.12:56,0,23	0/0:14,0:14:3.01:0,3,32	0/0:17,0:20:8.17:0,8,86	0/1:10,0:12:41.28:123,0,41	0/1:17,0:19:99:285,0,132	0/0:5,0:14:9.89:0,10,84	0/1:6,0:6:4.81:75,0,5
chr10	22910330	.	TGTGC	T	6460.06	PASS	AB=1.000;AC=45;AF=0.804;AN=56;BaseQRankSum=-3.550;DP=628;FS=0.000;HRun=0;HaplotypeScore=133.9989;InbreedingCoeff=0.1327;MQ=67.51;MQ0=18;MQRankSum=-2.712;QD=12.47;ReadPosRankSum=2.067;VQSLOD=4.4267;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:22,2:24:44.40:418,44,0	0/1:8,0:8:7.64:39,0,8	0/0:65,0:27:37.69:0,38,428	0/0:45,0:21:15.91:0,16,228	1/1:20,1:21:0.47:1,0,0	1/1:1,16:17:8.95:129,9,0	1/1:4,12:16:14.93:205,15,0	1/1:24,0:23:59.86:511,60,0	1/1:14,4:17:36.72:391,37,0	0/1:29,0:28:99:257,0,226	0/1:23,0:23:99:201,0,111	1/1:1,21:22:18.06:335,18,0	1/1:11,5:14:5.05:412,5,0	1/1:12,4:16:44.54:475,45,0	1/1:15,0:15:32.85:291,33,0	1/1:21,0:21:18.05:212,18,0	0/1:32,0:32:94.87:310,0,95	0/1:30,0:28:68.07:227,0,68	0/1:19,0:18:99:179,0,115	1/1:20,0:19:0.25:137,0,0	0/1:39,0:38:22.85:329,0,23	1/1:2,21:23:8.94:110,9,0	1/1:1,13:14:2.86:57,3,0	1/1:3,19:22:11.55:206,12,0	1/1:9,2:11:24:243,24,0	1/1:16,2:18:29.11:503,29,0	1/1:11,3:14:8.68:169,9,0	1/1:6,0:6:14.92:114,15,0
chr10	22910332	.	TGC	T	6101.49	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-0.228;DP=617;FS=6.017;HRun=0;HaplotypeScore=120.2118;InbreedingCoeff=0.6586;MQ=63.95;MQ0=18;MQRankSum=-3.745;QD=11.92;ReadPosRankSum=0.688;VQSLOD=4.4953;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:24:46.38:342,46,0	1/1:8,0:8:14.97:122,15,0	0/0:63,0:25:37.91:0,38,429	0/0:42,0:18:15.95:0,16,228	1/1:1,20:21:3.01:46,3,0	1/1:17,0:17:8.78:61,9,0	1/1:15,0:15:14.88:110,15,0	1/1:22,0:21:59.86:511,60,0	1/1:18,0:17:35.84:283,36,0	1/1:31,0:30:13.79:527,14,0	1/1:25,0:25:19.76:360,20,0	1/1:22,0:22:17.85:144,18,0	1/1:14,1:13:1.07:263,1,0	1/1:16,0:16:42.76:337,43,0	1/1:15,0:15:32.77:249,33,0	1/1:20,0:20:17.87:129,18,0	1/1:34,0:34:33.08:455,33,0	1/1:29,0:27:32.97:302,33,0	1/1:17,0:16:22.28:256,22,0	1/1:20,0:19:28.71:205,29,0	1/1:37,0:36:49.37:408,49,0	1/1:23,0:23:8.90:64,9,0	1/1:14,0:14:2.59:24,3,0	1/1:22,0:22:12.33:96,12,0	1/1:11,0:11:23.64:183,24,0	1/1:18,0:18:50.94:437,51,0	1/1:12,0:12:8.58:73,9,0	1/1:6,0:6:14.92:114,15,0
chr10	22910378	.	T	TGC	5178.90	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-1.361;DP=567;FS=25.252;HRun=0;HaplotypeScore=116.6943;InbreedingCoeff=0.8470;MQ=65.03;MQ0=13;MQRankSum=0.589;QD=11.59;ReadPosRankSum=1.033;VQSLOD=2.9991;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:23,1:24:46.90:359,47,0	1/1:10,0:10:17.64:136,18,0	0/0:20,0:10:27:0,27,260	0/0:28,0:24:50.91:0,51,490	0/0:30,0:30:59.85:0,60,488	1/1:20,0:20:29.33:227,29,0	1/1:19,1:20:39.82:326,40,0	1/1:22,0:22:43.37:308,43,0	1/1:13,0:12:8.80:97,9,0	0/0:26,0:25:49.35:0,49,458	0/0:16,0:16:35.87:0,36,326	1/1:18,1:19:31.75:218,32,0	1/1:24,0:23:50.10:332,50,0	1/1:15,0:15:40.95:245,41,0	1/1:18,0:18:38.39:279,38,0	1/1:16,0:15:25.36:196,25,0	1/1:8,0:24:0.36:132,0,0	1/1:8,15:21:6.28:193,6,0	1/1:7,0:22:34.04:351,34,0	1/1:5,13:19:6.02:106,6,0	1/1:6,23:28:3.01:54,3,0	1/1:22,0:22:36.03:251,36,0	1/1:10,0:10:14.07:102,14,0	1/1:25,0:24:33.08:224,33,0	1/1:15,0:15:33.91:242,34,0	1/1:19,0:19:40.35:283,40,0	1/1:23,0:23:52.65:362,53,0	1/1:9,0:9:23.67:155,24,0
chr10	22911538	.	C	CCA	30048.11	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=4.620;DP=829;FS=9.271;HRun=0;HaplotypeScore=207.0950;InbreedingCoeff=0.9918;MQ=81.45;MQ0=0;MQRankSum=-10.754;QD=39.38;ReadPosRankSum=7.935;VQSLOD=4.1272;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,48:58:99:2260,129,0	1/1:3,17:20:42.12:734,42,0	0/0:32,0:32:57.63:0,58,831	0/0:34,0:33:58.62:0,59,878	1/1:5,25:31:63.22:1102,63,0	1/1:2,28:30:69.24:1208,69,0	1/1:5,32:37:84.29:1472,84,0	1/1:11,18:30:60.17:983,60,0	1/1:4,22:26:54.19:947,54,0	1/1:5,28:34:84.29:1471,84,0	1/1:3,25:28:66.23:1156,66,0	1/1:2,20:23:63.22:1100,63,0	1/1:3,22:25:63.16:1097,63,0	1/1:0,27:27:72.25:1261,72,0	1/1:1,44:45:99:1841,105,0	1/1:2,29:32:81.28:1420,81,0	1/1:3,21:23:57.20:999,57,0	1/1:3,23:26:57.32:987,57,0	1/1:3,19:22:54.19:947,54,0	1/1:2,25:27:57.20:998,57,0	1/1:3,28:31:57.20:999,57,0	1/1:2,21:24:48.16:841,48,0	1/1:3,23:26:63.22:1105,63,0	1/1:6,19:26:38.73:684,39,0	1/1:3,24:27:45.15:789,45,0	1/1:0,31:31:93.32:1623,93,0	1/1:6,38:45:99:1788,102,0	1/1:2,6:8:15.05:238,15,0
chr10	22911957	.	TA	T	8493.55	PASS	AB=0.691;AC=27;AF=0.482;AN=56;BaseQRankSum=9.464;DP=743;FS=35.214;HRun=2;HaplotypeScore=223.3635;InbreedingCoeff=-0.7955;MQ=73.58;MQ0=0;MQRankSum=-11.869;QD=12.36;ReadPosRankSum=1.426;VQSLOD=1.2635;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:11,3:14:52.57:57,0,53	0/1:6,5:11:76.38:144,0,76	0/0:32,0:32:96.30:0,96,1398	0/0:24,0:24:69.21:0,69,1004	0/1:21,19:40:99:485,0,111	0/1:24,14:38:99:413,0,229	0/1:11,13:24:93.73:337,0,94	0/1:29,17:46:99:365,0,1046	0/1:16,11:27:99:354,0,175	0/1:14,5:19:99:122,0,565	0/1:15,15:30:99:422,0,137	0/1:12,11:23:99:322,0,207	0/1:13,23:36:91.55:618,0,92	0/1:12,15:27:76.32:430,0,76	0/1:17,22:39:99:646,0,131	0/1:20,15:35:99:418,0,209	0/1:9,10:19:60.69:238,0,61	0/1:2,6:8:40.62:189,0,41	0/1:12,7:19:99:194,0,417	0/1:24,25:49:99:689,0,243	0/1:6,4:10:18.95:138,0,19	0/1:23,14:37:99:379,0,260	0/1:17,9:26:99:193,0,184	0/1:8,5:13:82.83:83,0,105	0/1:11,13:24:99:295,0,153	0/1:20,15:35:99:388,0,605	0/1:18,17:35:99:472,0,265	1/1:0,3:3:9.03:105,9,0
chr10	22911961	.	C	CTCTGTTTCCT	36703.77	PASS	AB=1.000;AC=51;AF=0.911;AN=56;BaseQRankSum=11.319;DP=480;FS=6.929;HRun=0;HaplotypeScore=372.3892;InbreedingCoeff=0.6786;MQ=86.58;MQ0=0;MQRankSum=-11.573;QD=85.76;ReadPosRankSum=7.636;VQSLOD=3.6451;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,1:5:12:395,12,0	1/1:6,0:6:18.05:512,18,0	0/0:30,0:30:87.30:0,87,2800	0/0:22,0:22:60.21:0,60,1944	1/1:21,3:24:51.04:1471,51,0	1/1:16,4:20:49.50:1714,49,0	1/1:13,0:13:32.98:1183,33,0	1/1:20,0:20:44.72:893,45,0	1/1:11,4:16:45.63:1792,46,0	1/1:7,0:7:14.54:526,15,0	1/1:17,1:18:48.12:1455,48,0	1/1:12,5:17:51.13:1901,51,0	1/1:27,2:30:65.08:2318,65,0	1/1:15,3:18:48.06:1573,48,0	1/1:23,5:28:78.21:3040,78,0	1/1:20,6:26:50.08:2469,50,0	1/1:10,4:14:36.56:1442,37,0	1/1:7,0:7:2.08:583,2,0	0/1:10,0:10:15.29:547,0,15	1/1:29,2:31:74.65:2291,75,0	1/1:5,0:5:15.05:634,15,0	1/1:18,6:24:49.42:2045,49,0	1/1:10,1:11:25.26:801,25,0	1/1:6,3:9:17.27:634,17,0	1/1:15,4:19:42.14:1734,42,0	1/1:19,4:23:45.68:1962,46,0	1/1:19,5:24:46.89:2549,47,0	1/1:3,0:3:9:242,9,0
chr10	22911962	.	A	AATCTTTATTTCCTATTT	69144.89	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=6.440;DP=517;FS=7.089;HRun=0;HaplotypeScore=348.4541;InbreedingCoeff=0.8311;MQ=85.52;MQ0=0;MQRankSum=-11.897;QD=149.34;ReadPosRankSum=6.360;VQSLOD=3.7030;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,1:7:12.04:651,12,0	1/1:7,0:7:0.57:881,1,0	0/0:31,0:31:87.28:0,87,3810	0/0:23,0:23:63.21:0,63,2565	1/1:23,3:26:45.66:3097,46,0	1/1:17,4:21:39.21:3060,39,0	1/1:14,0:14:36.12:2135,36,0	1/1:21,0:21:51.18:2076,51,0	1/1:13,4:17:48.16:3127,48,0	1/1:11,0:11:30.08:1415,30,0	1/1:18,1:19:52.72:2551,53,0	1/1:13,4:18:49.41:3176,49,0	1/1:30,3:33:84.26:4448,84,0	1/1:18,3:21:57.20:3456,57,0	1/1:23,5:28:78.27:5196,78,0	1/1:19,6:25:72.23:4453,72,0	1/1:12,4:16:42.14:2655,42,0	1/1:7,0:7:21.07:1185,21,0	1/1:15,0:15:45.11:1698,45,0	1/1:29,2:31:93.30:4606,93,0	1/1:6,0:6:18.06:1275,18,0	1/1:18,6:24:64.77:3742,65,0	1/1:13,1:14:11.81:1544,12,0	1/1:6,3:9:21.07:937,21,0	1/1:16,4:20:43.94:2842,44,0	1/1:19,4:23:48.89:3614,49,0	1/1:22,5:27:75.26:4769,75,0	1/1:3,0:3:9.03:557,9,0
chr10	22912837	.	AAGTTTTGC	A	3859.14	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=10.667;DP=655;FS=0.000;HRun=0;HaplotypeScore=172.1442;InbreedingCoeff=0.9930;MQ=90.22;MQ0=0;MQRankSum=-10.171;QD=60.30;ReadPosRankSum=0.420;VQSLOD=3.5964;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,108,4473	0/0:13,0:13:39.13:0,39,1714	0/0:22,0:22:54.18:0,54,1675	0/0:32,0:32:90.27:0,90,3267	1/1:3,25:28:51.17:1423,51,0	0/0:28,0:27:78.27:0,78,3262	0/0:15,0:15:45.15:0,45,1951	0/0:37,0:37:99:0,105,4329	0/0:25,0:25:75.26:0,75,3235	1/1:1,18:19:51.16:1327,51,0	1/1:0,17:17:42.10:1108,42,0	0/0:22,0:22:60.21:0,60,2616	0/0:31,0:31:90.31:0,90,3884	0/0:23,0:23:66.20:0,66,2513	0/0:37,0:37:99:0,108,4525	0/0:24,0:24:72.25:0,72,3097	0/0:26,0:26:78.27:0,78,3325	0/0:18,0:18:51.18:0,51,2119	0/0:18,0:18:51.17:0,51,1931	0/0:24,0:24:72.25:0,72,3047	0/0:19,0:19:48.16:0,48,2100	0/0:19,0:19:54.19:0,54,2303	0/0:20,0:20:60.19:0,60,2330	0/0:19,0:19:54.19:0,54,2343	0/0:17,0:17:48.16:0,48,2013	0/0:34,1:35:21.53:0,22,4330	0/0:23,0:22:66.23:0,66,2786	0/0:6,0:6:15.05:0,15,622
chr10	22914150	.	AG	A	18134.80	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=8.054;DP=537;FS=0.486;HRun=1;HaplotypeScore=52.9690;InbreedingCoeff=0.9894;MQ=75.18;MQ0=0;MQRankSum=-4.145;QD=38.50;ReadPosRankSum=1.307;VQSLOD=5.1723;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,13:13:36.12:503,36,0	1/1:0,11:11:27.09:378,27,0	0/0:10,0:10:30.06:0,30,451	0/0:8,0:8:21.04:0,21,287	1/1:0,29:29:84.28:1174,84,0	1/1:0,18:18:51.17:713,51,0	1/1:0,12:12:36.12:503,36,0	1/1:0,41:41:99:1611,120,0	1/1:0,18:18:48.16:671,48,0	1/1:0,25:25:75.23:1015,75,0	1/1:0,27:27:75.12:1002,75,0	1/1:0,16:16:45.15:629,45,0	1/1:0,15:15:45.15:629,45,0	1/1:0,16:16:39.13:545,39,0	0/0:27,0:27:81.26:0,81,1269	0/0:21,0:21:63.20:0,63,984	1/1:0,17:17:42.14:586,42,0	1/1:0,14:14:36.12:503,36,0	1/1:0,26:26:78.24:1057,78,0	1/1:0,29:29:84.28:1174,84,0	1/1:0,11:11:30.10:420,30,0	1/1:0,11:11:33.07:439,33,0	1/1:0,21:21:57.19:797,57,0	1/1:0,10:10:30.10:419,30,0	1/1:0,16:16:45.15:629,45,0	1/1:0,22:22:66.20:891,66,0	1/1:0,43:43:99:1678,120,0	1/1:0,10:10:12.04:168,12,0
chr10	22915211	.	ATC	A	350	PASS	AB=0.925;AC=10;AF=0.192;AN=52;BaseQRankSum=1.721;DP=332;FS=2.645;HRun=0;HaplotypeScore=132.2220;InbreedingCoeff=0.2505;MQ=46.83;MQ0=14;MQRankSum=1.842;QD=3.43;ReadPosRankSum=3.566;VQSLOD=2.7262;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:13,0:13:28.86:29,0,144	0/0:8,0:8:11.83:0,12,201	0/0:8,0:5:12.04:0,12,170	0/0:2,0:1:3.01:0,3,43	0/0:21,0:18:38.97:0,39,610	1/1:7,2:9:13.79:104,14,0	0/0:6,0:6:8.91:0,9,105	0/1:34,0:25:99:102,0,271	./.	0/0:18,0:17:44.64:0,45,651	0/0:20,0:18:23.43:0,23,347	0/0:4,0:4:4.07:0,4,11	0/1:5,1:6:4.41:16,0,4	0/1:6,0:6:3.42:19,0,3	0/0:23,0:23:28:0,28,455	0/0:29,0:29:30.63:0,31,601	0/0:25,0:25:23.53:0,24,299	0/0:12,0:11:28.62:0,29,364	0/0:11,0:8:24.08:0,24,340	0/0:12,0:12:20.67:0,21,300	0/0:2,0:2:3.01:0,3,43	1/1:8,1:7:8.99:75,9,0	0/0:6,0:6:7.76:0,8,89	./.	0/0:20,0:20:15.42:0,15,261	0/1:6,1:6:16.40:16,0,62	0/1:14,4:18:8.75:133,0,9	0/0:2,0:2:6.02:0,6,85
chr10	22915215	.	ATCTATCTATCTATC	A	2069.59	PASS	AB=0.943;AC=21;AF=0.404;AN=52;BaseQRankSum=6.313;DP=323;FS=2.019;HRun=0;HaplotypeScore=179.6001;InbreedingCoeff=0.2497;MQ=45.98;MQ0=12;MQRankSum=-5.305;QD=12.32;ReadPosRankSum=0.750;VQSLOD=2.7808;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:12,0:12:16.18:59,0,16	0/0:8,0:8:11.88:0,12,412	0/0:7,0:4:6.01:0,6,69	0/0:2,0:1:3.01:0,3,42	0/0:21,0:18:35.84:0,36,753	1/1:7,2:9:14.30:292,14,0	0/0:4,0:4:8.81:0,9,76	0/1:34,0:25:98.85:99,0,164	./.	0/1:17,0:16:35.86:36,0,803	0/1:19,0:17:21.04:21,0,485	1/1:4,0:4:5.97:60,6,0	1/1:6,1:7:9.03:185,9,0	1/1:5,0:5:2.55:37,3,0	0/0:22,0:22:60.17:0,60,1929	0/0:28,0:28:84.08:0,84,2268	0/0:27,0:27:23.12:0,23,272	0/0:12,0:11:25.60:0,26,590	0/0:9,0:7:20.42:0,20,458	0/0:12,0:12:20.74:0,21,476	0/0:2,0:2:3.01:0,3,91	1/1:7,1:6:9:132,9,0	0/1:6,0:6:21.14:30,0,21	./.	0/1:13,0:20:12.75:532,0,13	0/1:5,1:5:10.92:140,0,11	1/1:15,4:19:1.12:537,1,0	1/1:2,0:2:6.02:79,6,0
chr10	22915219	.	ATCTATCTATCTATC	A	1936.58	PASS	AB=0.974;AC=18;AF=0.375;AN=48;BaseQRankSum=6.763;DP=317;FS=8.898;HRun=0;HaplotypeScore=178.1323;InbreedingCoeff=0.0581;MQ=42.51;MQ0=14;MQRankSum=-5.661;QD=11.74;ReadPosRankSum=1.498;VQSLOD=1.9714;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:12,0:12:16.03:58,0,16	0/0:8,0:8:11.88:0,12,395	./.	./.	0/0:21,0:18:35.84:0,36,741	1/1:9,0:9:11.30:267,11,0	0/0:4,0:4:5.80:0,6,33	0/1:33,0:24:80.22:80,0,200	./.	0/1:16,0:15:37.62:38,0,661	0/1:22,0:19:21.07:21,0,397	1/1:5,0:5:5.97:60,6,0	1/1:6,0:6:9.03:184,9,0	0/1:5,0:5:20.21:29,0,20	0/0:22,0:22:63.11:0,63,1632	0/0:25,0:25:75.02:0,75,1774	0/0:27,0:27:19.51:0,20,252	0/0:12,0:11:25.20:0,25,551	0/0:12,0:8:22.03:0,22,450	0/0:11,0:11:20.71:0,21,434	0/0:2,0:2:3.01:0,3,91	1/1:6,0:4:3.01:82,3,0	0/1:5,0:5:20.74:30,0,21	./.	0/1:13,7:20:11.20:537,0,11	0/1:6,0:5:10.99:141,0,11	0/1:17,0:17:5.04:496,0,5	0/1:3,0:3:6.12:70,0,6
chr10	22915223	.	ATC	A	853.19	PASS	AB=0.947;AC=11;AF=0.220;AN=50;BaseQRankSum=2.058;DP=315;FS=15.831;HRun=0;HaplotypeScore=134.3276;InbreedingCoeff=0.2963;MQ=41.79;MQ0=17;MQRankSum=0.567;QD=7.29;ReadPosRankSum=5.021;VQSLOD=2.4320;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:10.60:0,11,59	0/0:8,0:8:11.72:0,12,174	0/0:6,0:1:3:0,3,28	./.	0/1:14,8:19:99:143,0,219	1/1:8,0:8:11.14:70,11,0	0/0:2,0:2:5.82:0,6,33	0/0:35,0:26:25.67:0,26,268	./.	1/1:8,9:16:39.43:456,39,0	1/1:7,15:18:16.44:187,16,0	0/0:6,0:6:1.89:0,2,8	0/1:6,0:6:6.04:12,0,6	0/0:4,0:4:7.81:0,8,37	0/0:22,0:22:27.91:0,28,437	0/0:25,0:25:21.78:0,22,475	0/0:26,0:26:11.92:0,12,142	0/0:12,0:10:22.79:0,23,276	0/0:13,0:9:21.19:0,21,221	0/0:10,0:10:17.26:0,17,173	0/0:2,0:2:3.01:0,3,43	0/0:5,0:3:4.66:0,5,19	0/0:5,0:5:7.88:0,8,41	./.	0/1:21,0:21:71.40:71,0,124	0/1:5,0:4:8.32:8,0,47	0/1:16,0:16:42.51:55,0,43	0/0:4,0:3:8.85:0,9,58
chr10	22915225	.	C	CTA	508.88	PASS	AB=0.980;AC=8;AF=0.154;AN=52;BaseQRankSum=0.530;DP=310;FS=8.428;HRun=0;HaplotypeScore=130.0357;InbreedingCoeff=0.3057;MQ=42.04;MQ0=15;MQRankSum=0.705;QD=4.63;ReadPosRankSum=-1.078;VQSLOD=2.1794;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:13.66:0,14,75	0/0:8,0:8:11.72:0,12,144	0/0:5,0:2:6.01:0,6,70	./.	1/1:14,6:17:9.80:286,10,0	0/0:9,0:9:9.13:0,9,41	0/0:2,0:2:5.82:0,6,33	0/0:32,0:23:49.81:0,50,302	0/0:1,0:1:2.94:0,3,18	1/1:16,1:16:15.56:269,16,0	0/1:21,2:19:4.90:52,0,5	0/0:6,0:6:1.89:0,2,8	0/0:6,0:6:6.29:0,6,18	0/0:4,0:4:7.81:0,8,37	0/0:22,0:22:26.11:0,26,383	0/0:26,0:26:48.54:0,49,431	0/1:26,0:26:11.78:12,0,92	0/0:12,0:10:21.91:0,22,232	0/0:12,0:8:20.72:0,21,219	0/0:10,0:10:17.31:0,17,136	0/0:2,0:2:3.01:0,3,43	0/1:4,0:2:7.96:14,0,8	0/0:5,0:5:7.88:0,8,41	./.	0/1:20,0:20:8.47:8,0,151	0/0:6,0:5:11.56:0,12,73	0/0:15,0:15:24.68:0,25,114	0/0:4,0:3:8.85:0,9,58
chr10	22915229	.	CT	C	616.98	PASS	AB=0.850;AC=14;AF=0.259;AN=54;BaseQRankSum=7.115;DP=307;FS=12.540;HRun=1;HaplotypeScore=122.6743;InbreedingCoeff=0.0694;MQ=42.70;MQ0=13;MQRankSum=-7.242;QD=5.32;ReadPosRankSum=0.343;VQSLOD=-0.7307;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:9,1:10:29.79:30,0,114	0/0:8,0:8:12.04:0,12,184	0/0:5,0:2:6.02:0,6,82	0/0:3,0:3:6:0,6,67	0/0:19,0:16:25.06:0,25,192	1/1:8,0:8:9.12:67,9,0	0/0:1,0:1:3.01:0,3,42	0/1:30,1:24:8.86:9,0,584	0/0:2,0:2:5.93:0,6,59	0/0:18,0:17:27.40:0,27,157	0/0:24,0:20:8.75:0,9,68	1/1:3,2:5:4.69:81,5,0	1/1:2,4:6:8.90:98,9,0	0/1:3,1:4:32.76:33,0,75	0/0:23,0:23:51.73:0,52,506	0/0:26,0:26:61.09:0,61,614	0/0:25,0:26:7.96:0,8,117	0/1:8,1:8:23.56:24,0,238	0/0:13,0:9:24.08:0,24,349	0/0:10,0:10:17.82:0,18,221	0/0:2,0:2:3.01:0,3,46	0/1:4,0:2:22.99:23,0,36	0/1:3,3:6:29.90:30,0,89	./.	0/1:15,4:19:99:183,0,101	0/0:6,0:5:9.58:0,10,161	0/1:8,5:13:60.52:196,0,61	0/0:4,0:3:9.03:0,9,128
chr10	22915231	.	ATC	A	1361.54	PASS	AB=0.963;AC=18;AF=0.333;AN=54;BaseQRankSum=-1.380;DP=306;FS=2.764;HRun=0;HaplotypeScore=122.6336;InbreedingCoeff=-0.1562;MQ=43.11;MQ0=12;MQRankSum=1.534;QD=5.72;ReadPosRankSum=3.121;VQSLOD=2.8559;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:11.51:0,12,65	0/0:8,0:8:11.70:0,12,173	0/0:5,0:2:6.02:0,6,85	0/1:4,0:4:1.14:1,0,48	0/1:20,0:17:6.82:215,0,7	0/1:8,0:8:3.54:35,0,4	0/0:1,0:1:2.84:0,3,14	0/1:30,0:24:48.82:49,0,206	0/1:2,0:2:12.22:18,0,12	1/1:18,0:17:42:471,42,0	1/1:24,0:20:15.17:180,15,0	0/1:5,0:5:18.11:31,0,18	0/1:6,0:6:12.79:13,0,18	0/0:4,0:4:8.51:0,9,42	0/1:17,8:25:99:172,0,126	0/1:17,11:28:99:233,0,168	0/1:24,0:24:27.43:30,0,27	0/0:10,0:8:16.16:0,16,220	0/0:12,0:8:17.52:0,18,177	0/0:7,0:7:8.13:0,8,43	0/0:2,0:2:3.01:0,3,42	0/0:4,0:2:4.40:0,4,18	0/1:6,0:6:12.37:12,0,31	./.	0/1:19,0:19:10.55:11,0,73	0/1:6,0:5:11.28:11,0,45	0/1:13,0:13:36:36,0,88	0/0:4,0:3:8.82:0,9,56
chr10	22915233	.	C	CTATATATA	2862.02	PASS	AB=0.957;AC=38;AF=0.704;AN=54;BaseQRankSum=-1.773;DP=317;FS=0.653;HRun=0;HaplotypeScore=149.3740;InbreedingCoeff=0.0851;MQ=43.69;MQ0=12;MQRankSum=-2.135;QD=11.22;ReadPosRankSum=-1.019;VQSLOD=2.6098;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:10,0:10:9.02:131,9,0	0/1:8,0:8:37.26:37,0,138	0/0:5,0:2:6.02:0,6,108	0/1:5,0:5:9.94:10,0,66	1/1:20,0:17:7.69:374,8,0	0/1:9,0:9:1.99:2,0,2	1/1:1,0:1:3.01:50,3,0	1/1:31,0:25:60.62:781,61,0	1/1:3,0:3:6.02:85,6,0	0/1:18,0:17:31.65:270,0,32	0/1:25,0:21:61.51:146,0,62	1/1:5,0:5:2.99:33,3,0	1/1:7,0:7:2.96:21,3,0	1/1:4,0:4:6.01:99,6,0	0/0:25,0:25:14.56:0,15,467	0/0:28,0:28:16.59:0,17,477	0/1:5,14:25:9.95:34,0,10	0/1:10,0:8:29.93:30,0,163	0/1:12,0:8:11.30:158,0,11	1/1:7,0:7:8.96:150,9,0	./.	1/1:5,0:3:5.38:58,5,0	1/1:6,0:6:9.02:143,9,0	0/1:1,0:1:0:0,0,0	1/1:19,0:19:2.90:13,3,0	1/1:6,0:5:10.73:167,11,0	0/1:14,0:14:0.55:103,0,1	1/1:4,0:3:9.03:120,9,0
chr10	22915275	.	TTCTA	T	1923.81	PASS	AB=0.833;AC=9;AF=0.173;AN=52;BaseQRankSum=0.199;DP=461;FS=0.618;HRun=0;HaplotypeScore=131.8839;InbreedingCoeff=0.5106;MQ=57.32;MQ0=9;MQRankSum=1.497;QD=16.17;ReadPosRankSum=-0.004;VQSLOD=2.9993;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:18.06:0,18,407	0/0:1,0:6:14.08:0,14,215	./.	./.	0/0:29,1:27:8.07:0,8,1141	0/0:15,0:15:30.10:0,30,679	0/0:7,0:7:9.03:0,9,209	0/0:38,0:37:3.01:0,3,49	0/0:10,0:10:27.09:0,27,628	1/1:8,14:21:42.13:622,42,0	1/1:11,16:23:45.07:638,45,0	0/0:7,0:7:12.04:0,12,280	0/0:9,0:9:24.08:0,24,560	0/0:15,0:15:36.12:0,36,835	0/1:14,10:24:49:255,0,49	1/1:13,15:28:33.11:506,33,0	0/0:26,0:26:32.98:0,33,693	0/0:10,0:12:21.07:0,21,364	0/0:8,0:15:24.08:0,24,432	0/0:5,0:20:42.14:0,42,732	0/0:1,0:7:9.03:0,9,157	0/0:13,0:13:30.10:0,30,698	0/1:10,1:11:21.96:22,0,441	0/0:3,0:3:9.03:0,9,210	0/0:26,0:26:42.14:0,42,961	0/0:6,0:13:24.08:0,24,415	0/0:24,0:24:54.14:0,54,1161	0/1:6,1:6:34:34,0,178
chr10	22916980	.	C	CT	19399.03	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-16.420;DP=733;FS=0.000;HRun=2;HaplotypeScore=63.3836;InbreedingCoeff=0.9973;MQ=79.92;MQ0=0;MQRankSum=-1.774;QD=39.19;ReadPosRankSum=2.890;VQSLOD=5.2851;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,42:45:99:1815,126,0	0/0:8,0:8:24.05:0,24,282	0/0:19,0:19:51.14:0,51,606	0/0:18,0:18:38.03:0,38,490	1/1:1,26:27:78.22:1100,78,0	1/1:0,20:20:57.19:821,57,0	1/1:0,20:20:51.17:735,51,0	1/1:5,35:40:99:1449,102,0	1/1:2,24:26:69.23:994,69,0	1/1:2,35:37:99:1492,105,0	1/1:2,22:24:69.23:989,69,0	1/1:1,21:22:63.21:907,63,0	1/1:1,31:32:90.30:1296,90,0	1/1:2,34:36:87.29:1252,87,0	0/0:29,0:29:87.27:0,87,1079	0/0:33,0:33:93.29:0,93,1153	0/0:27,0:27:81.25:0,81,1004	0/0:22,0:22:66.17:0,66,788	0/0:24,0:24:69.19:0,69,830	0/0:31,0:31:90.28:0,90,1116	0/0:27,0:27:78.23:0,78,953	1/1:0,26:26:75.25:1080,75,0	1/1:0,25:25:69.23:993,69,0	1/1:2,27:29:72.24:1037,72,0	1/1:1,20:21:54.18:778,54,0	1/1:1,30:31:87.28:1235,87,0	1/1:0,29:29:84.28:1210,84,0	1/1:0,5:5:15.05:216,15,0
chr10	22917256	.	AC	A	2908.58	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=7.455;DP=656;FS=5.662;HRun=1;HaplotypeScore=68.1869;InbreedingCoeff=0.9988;MQ=81.81;MQ0=0;MQRankSum=-1.365;QD=37.77;ReadPosRankSum=0.401;VQSLOD=4.0187;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:99:0,99,1536	0/0:9,0:9:27.09:0,27,420	0/0:20,0:20:51.25:0,51,685	0/0:14,0:14:42.07:0,42,578	1/1:0,22:22:63.21:881,63,0	0/0:19,0:19:57.18:0,57,868	0/0:20,0:20:60.14:0,60,844	0/0:31,0:31:93.31:0,93,1436	0/0:15,0:15:45.15:0,45,704	1/1:0,31:31:90.26:1206,90,0	1/1:0,24:24:69.23:965,69,0	0/0:23,0:23:69.23:0,69,1077	0/0:27,0:27:81.26:0,81,1242	0/0:25,0:25:75.22:0,75,1127	0/0:41,0:41:99:0,120,1854	0/0:27,0:27:81.24:0,81,1221	0/0:20,0:19:57.19:0,57,891	0/0:15,0:15:45.15:0,45,703	0/0:22,0:22:66.20:0,66,988	0/0:30,0:30:90.28:0,90,1362	0/0:25,0:25:75.22:0,75,1126	0/0:22,0:22:66.20:0,66,987	0/0:25,0:25:75.24:0,75,1148	0/0:14,0:14:42.11:0,42,608	0/0:27,0:27:80.94:0,81,1228	0/0:37,2:39:33.51:0,34,1634	0/0:28,0:28:84.29:0,84,1313	0/0:8,0:8:24.08:0,24,375
chr10	22919041	.	TTGTGTGTG	T	4821.64	PASS	AB=0.805;AC=36;AF=0.750;AN=48;BaseQRankSum=5.904;DP=540;FS=1.441;HRun=0;HaplotypeScore=149.0799;InbreedingCoeff=0.5418;MQ=56.04;MQ0=12;MQRankSum=-8.025;QD=12.33;ReadPosRankSum=2.769;VQSLOD=3.9616;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:28,9:36:16.48:90,0,16	1/1:8,0:9:3.01:56,3,0	./.	./.	0/0:18,0:23:15.05:0,15,527	1/1:10,8:18:3.81:485,4,0	1/1:5,5:10:6.02:150,6,0	1/1:22,0:19:2.87:39,3,0	1/1:14,7:22:15.05:355,15,0	0/0:29,0:29:45.15:0,45,1566	0/0:15,0:15:21.07:0,21,686	1/1:12,10:22:21.07:521,21,0	1/1:10,12:23:30.10:730,30,0	1/1:11,12:23:24.08:599,24,0	0/0:22,0:21:27.09:0,27,1029	0/0:18,0:20:30.10:0,30,1076	1/1:14,0:17:6.02:112,6,0	1/1:9,0:13:3.01:56,3,0	./.	1/1:14,0:17:6.02:112,6,0	1/1:23,0:29:3.01:56,3,0	1/1:8,7:14:15.05:375,15,0	1/1:15,0:20:5.35:26,5,0	0/1:14,0:18:32.64:33,0,121	1/1:13,9:22:20.96:447,21,0	1/1:16,4:20:14.84:314,15,0	1/1:15,14:29:12.04:268,12,0	./.
chr10	22920030	.	T	TA	21545.02	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-5.354;DP=715;FS=0.000;HRun=6;HaplotypeScore=77.5719;InbreedingCoeff=0.9907;MQ=84.18;MQ0=0;MQRankSum=-10.183;QD=32.01;ReadPosRankSum=5.855;VQSLOD=4.5020;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,25:26:66.21:830,66,0	1/1:0,8:9:23.91:279,24,0	0/0:28,0:28:44.78:0,45,703	0/0:14,0:14:35.92:0,36,335	1/1:3,25:28:66.21:830,66,0	1/1:1,27:28:78.25:981,78,0	1/1:2,18:20:54.17:679,54,0	1/1:8,33:41:99:1210,99,0	1/1:0,22:22:60.19:755,60,0	1/1:0,20:20:60.19:752,60,0	1/1:1,17:18:48.15:604,48,0	1/1:4,30:34:78.25:980,78,0	1/1:2,40:42:99:1472,117,0	1/1:6,22:28:63.20:793,63,0	1/1:1,28:29:78.25:981,78,0	1/1:5,33:38:90.29:1132,90,0	1/1:1,18:19:48.15:604,48,0	1/1:5,17:22:54.17:677,54,0	1/1:1,19:20:57.18:717,57,0	1/1:6,30:36:87.24:1077,87,0	1/1:1,23:24:63.20:792,63,0	1/1:4,22:26:60.19:755,60,0	1/1:2,20:22:57.18:717,57,0	1/1:1,23:24:63.20:793,63,0	1/1:3,25:28:75.24:944,75,0	1/1:4,20:24:63.16:756,63,0	1/1:2,35:37:99:1245,99,0	1/1:0,8:8:15.05:189,15,0
chr10	22920738	.	A	AT	19625.63	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-13.637;DP=705;FS=1.756;HRun=1;HaplotypeScore=60.1972;InbreedingCoeff=0.9912;MQ=80.30;MQ0=0;MQRankSum=-2.495;QD=40.13;ReadPosRankSum=2.378;VQSLOD=5.5662;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,54:56:99:2293,154,0	0/0:14,1:15:42.14:0,42,545	0/0:20,0:20:47.48:0,47,568	0/0:21,0:21:40.92:0,41,487	1/1:0,20:20:42.14:628,42,0	1/1:1,26:27:63.21:944,63,0	1/1:1,30:31:87.29:1304,87,0	1/1:2,47:49:99:2019,135,0	1/1:2,24:26:66.22:989,66,0	1/1:0,29:29:87.29:1304,87,0	1/1:0,12:12:33.11:494,33,0	1/1:1,27:28:81.27:1214,81,0	1/1:1,30:31:90.30:1348,90,0	1/1:0,33:33:93.32:1393,93,0	0/0:27,0:27:81.25:0,81,1037	0/0:21,0:21:63.17:0,63,788	0/0:18,0:18:54.16:0,54,687	0/0:12,0:12:33.11:0,33,427	0/0:25,0:24:75.24:0,75,961	0/0:23,0:23:69.22:0,69,894	0/0:34,0:34:96.30:0,96,1232	1/1:1,13:13:30.10:449,30,0	1/1:1,20:21:53.89:759,54,0	1/1:0,32:32:90.30:1349,90,0	1/1:0,21:21:54.18:809,54,0	1/1:0,25:25:75.25:1124,75,0	1/1:0,31:31:72.24:1070,72,0	1/1:0,3:3:9.03:135,9,0
chr10	22920986	.	G	GTC	3112.92	PASS	AB=0.542;AC=31;AF=0.596;AN=52;BaseQRankSum=11.506;DP=418;FS=35.126;HRun=0;HaplotypeScore=78.4130;InbreedingCoeff=0.8162;MQ=31.19;MQ0=86;MQRankSum=-5.573;QD=16.13;ReadPosRankSum=-0.481;VQSLOD=1.3817;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,13:13:12.04:152,12,0	0/0:8,1:9:24.08:0,24,390	./.	./.	1/1:5,10:13:6.48:75,6,0	1/1:2,10:9:21.03:237,21,0	1/1:6,3:5:15.01:173,15,0	1/1:17,4:5:12.04:162,12,0	1/1:3,6:9:18.04:215,18,0	0/0:15,0:14:39.13:0,39,635	0/0:4,0:3:6.02:0,6,98	1/1:2,13:14:18.06:227,18,0	1/1:1,10:11:27.06:317,27,0	1/1:0,13:13:27.09:343,27,0	0/0:23,0:21:60.20:0,60,976	0/0:22,0:21:60.19:0,60,953	0/0:44,0:31:75.26:0,75,1217	0/0:29,0:15:36.09:0,36,558	0/0:26,0:19:48.16:0,48,771	0/0:17,0:16:41.92:0,42,682	0/0:36,0:18:39.13:0,39,635	1/1:1,4:4:9.01:99,9,0	1/1:2,7:8:24.07:292,24,0	1/1:7,7:8:3.01:37,3,0	1/1:2,8:9:18.04:226,18,0	0/1:2,11:13:12.74:409,0,13	1/1:1,12:13:24.08:311,24,0	1/1:2,1:1:3.01:40,3,0
chr10	22920987	.	A	ATG	2814.80	PASS	AB=0.624;AC=27;AF=0.519;AN=52;BaseQRankSum=12.038;DP=415;FS=44.948;HRun=0;HaplotypeScore=79.0866;InbreedingCoeff=0.6907;MQ=31.13;MQ0=87;MQRankSum=-6.789;QD=15.90;ReadPosRankSum=0.820;VQSLOD=1.7088;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,13:13:12.04:152,12,0	0/0:8,1:9:24.08:0,24,391	./.	./.	0/0:5,10:13:5.57:0,6,36	1/1:2,10:9:20.90:224,21,0	0/1:6,3:5:5.50:101,0,5	1/1:16,4:4:12.04:162,12,0	0/1:3,6:9:5.81:172,0,6	0/0:15,0:14:39.13:0,39,635	0/0:4,0:3:6.02:0,6,98	1/1:2,13:14:18.06:227,18,0	1/1:1,10:11:24.07:295,24,0	1/1:0,13:13:27.09:342,27,0	0/0:23,0:21:60.20:0,60,977	0/0:22,0:21:60.19:0,60,954	0/0:44,0:31:75.26:0,75,1216	0/0:28,0:14:33.11:0,33,538	0/0:26,0:19:48.16:0,48,770	0/0:17,0:16:41.88:0,42,683	0/0:35,0:17:39.13:0,39,636	1/1:1,4:4:8.92:92,9,0	1/1:2,7:8:24.07:291,24,0	1/1:7,7:8:3.01:37,3,0	1/1:2,8:9:7.96:158,8,0	0/1:1,11:12:12.78:409,0,13	1/1:1,12:13:24.08:311,24,0	1/1:2,1:1:3.01:40,3,0
chr10	22921257	.	GAAA	G	8151.88	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-5.763;DP=398;FS=13.826;HRun=11;HaplotypeScore=71.8854;InbreedingCoeff=0.9456;MQ=65.93;MQ0=5;MQRankSum=-4.097;QD=31.11;ReadPosRankSum=1.042;VQSLOD=2.4616;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,31:33:87.23:1124,87,0	0/0:1,0:6:17.91:0,18,135	0/0:23,0:12:28.76:0,29,318	0/0:6,0:2:6.02:0,6,86	1/1:3,14:16:33.09:434,33,0	1/1:2,6:8:9.02:118,9,0	1/1:0,13:13:36.12:473,36,0	1/1:2,13:14:32.88:387,33,0	1/1:2,7:9:17.85:217,18,0	1/1:1,10:11:30.09:389,30,0	1/1:0,11:11:27.09:355,27,0	1/1:1,11:12:24.06:315,24,0	1/1:0,14:14:33.11:434,33,0	1/1:1,13:14:36.07:453,36,0	0/0:1,0:16:40.10:0,40,302	0/0:3,0:14:29.89:0,30,230	0/0:3,0:11:20.92:0,21,161	0/0:2,0:8:23.97:0,24,263	0/0:2,0:12:26.88:0,27,204	0/0:2,0:19:49.04:0,49,402	0/0:4,0:16:38.90:0,39,376	1/1:1,12:13:27.08:355,27,0	1/1:1,9:10:20.76:276,21,0	1/1:2,17:19:51.16:670,51,0	1/1:0,21:21:57.19:749,57,0	1/1:1,19:20:57.17:735,57,0	1/1:1,20:21:50.98:669,51,0	0/0:2,2:3:0:0,0,0
chr10	22922362	.	C	CT	1081.31	PASS	AB=0.831;AC=16;AF=0.286;AN=56;BaseQRankSum=-3.166;DP=551;FS=10.100;HRun=12;HaplotypeScore=74.6774;InbreedingCoeff=0.2933;MQ=78.55;MQ0=0;MQRankSum=0.226;QD=4.87;ReadPosRankSum=-1.217;VQSLOD=0.8505;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:14,1:17:16:16,0,187	1/1:1,4:6:8.85:73,9,0	0/0:21,0:18:9.67:0,10,147	0/1:22,1:25:29.33:29,0,75	0/0:27,0:27:27.77:0,28,358	0/1:20,3:24:34.89:35,0,254	0/0:10,0:13:29.97:0,30,193	0/1:22,2:30:1.42:1,0,263	0/0:16,0:16:32.75:0,33,239	0/0:6,0:23:36.78:0,37,120	0/0:3,0:15:24.43:0,24,71	0/0:14,2:19:9.69:0,10,205	0/0:18,0:20:42.79:0,43,296	0/0:27,0:29:39.44:0,39,363	0/0:23,1:25:35.49:0,35,414	0/0:19,1:22:22.56:0,23,309	1/1:5,12:19:16.82:298,17,0	0/1:5,6:11:40.80:123,0,41	1/1:11,1:23:21.21:171,21,0	1/1:5,12:20:21.87:333,22,0	0/1:5,10:17:14.20:161,0,14	0/0:16,0:18:42.82:0,43,296	0/0:13,0:16:28.36:0,28,188	0/0:13,0:15:36.86:0,37,250	0/0:23,1:25:15.80:0,16,354	0/1:23,2:26:8.68:9,0,255	0/0:23,1:25:0.83:0,1,288	0/1:2,0:3:5.40:5,0,35
chr10	22922602	.	A	AT	11435.22	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-9.869;DP=617;FS=6.165;HRun=8;HaplotypeScore=99.8396;InbreedingCoeff=0.9996;MQ=84.40;MQ0=0;MQRankSum=-2.678;QD=28.73;ReadPosRankSum=1.085;VQSLOD=4.4798;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,9:10:30.05:331,30,0	0/0:12,0:12:33.01:0,33,302	0/0:19,0:21:43.88:0,44,372	0/0:17,0:16:36:0,36,322	1/1:3,21:24:57.13:641,57,0	1/1:3,17:20:51.15:589,51,0	1/1:3,17:20:51.15:589,51,0	1/1:4,26:30:78.22:890,78,0	1/1:3,11:14:33.10:381,33,0	1/1:0,25:25:75.21:855,75,0	1/1:1,15:16:42.12:480,42,0	1/1:5,26:33:87.08:971,87,0	1/1:4,27:31:75.22:865,75,0	1/1:2,29:31:75.18:851,75,0	0/0:25,0:25:69.02:0,69,627	0/0:29,0:29:84.03:0,84,764	0/0:27,0:27:78.04:0,78,714	0/0:15,0:15:36.01:0,36,329	0/0:18,0:18:51.03:0,51,467	0/0:30,0:30:81.04:0,81,741	0/0:25,0:25:69.03:0,69,631	1/1:2,21:23:63.15:712,63,0	1/1:5,21:27:63.02:705,63,0	1/1:3,19:22:54.16:623,54,0	1/1:2,15:17:39.12:450,39,0	1/1:2,13:15:36.11:415,36,0	1/1:2,26:29:69.04:776,69,0	1/1:2,9:11:27.08:312,27,0
chr10	22922822	.	AT	A	1466.94	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.049;DP=528;FS=1.876;HRun=5;HaplotypeScore=125.2777;InbreedingCoeff=0.9769;MQ=70.29;MQ0=0;MQRankSum=-0.297;QD=28.21;ReadPosRankSum=1.748;VQSLOD=2.4101;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:27.09:0,27,369	0/0:11,0:11:30.07:0,30,391	0/0:7,0:7:18.02:0,18,202	0/0:10,0:10:14.22:0,14,308	0/0:39,0:39:99:0,105,1435	0/0:23,0:22:66.22:0,66,902	0/0:11,0:11:33.11:0,33,450	0/0:40,0:40:99:0,114,1559	0/0:14,0:14:42.13:0,42,559	1/1:2,26:28:75.20:840,75,0	1/1:1,23:24:66.19:749,66,0	0/0:23,0:23:69.23:0,69,944	0/0:34,0:34:99:0,99,1354	0/0:10,0:10:24.08:0,24,328	0/0:21,0:21:60.20:0,60,821	0/0:28,0:28:81.26:0,81,1091	0/0:16,0:16:39.06:0,39,479	0/0:6,0:6:18.06:0,18,236	0/0:16,0:16:45.15:0,45,616	0/0:17,0:17:48.16:0,48,655	0/0:19,0:19:54.18:0,54,735	0/0:9,0:9:27.09:0,27,369	0/0:22,0:22:57.16:0,57,750	0/0:17,0:17:51.12:0,51,660	0/0:20,0:20:57.19:0,57,776	0/0:17,1:18:20.19:0,20,662	0/0:23,0:23:63.21:0,63,859	0/0:13,0:13:30.10:0,30,410
chr10	22923186	.	AT	A	10048.25	PASS	AB=1.000;AC=54;AF=0.964;AN=56;BaseQRankSum=3.708;DP=558;FS=1.451;HRun=1;HaplotypeScore=184.3016;InbreedingCoeff=-0.0346;MQ=53.35;MQ0=0;MQRankSum=-3.691;QD=18.01;ReadPosRankSum=5.043;VQSLOD=5.1872;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,13:13:23.61:161,24,0	1/1:0,11:11:26.80:201,27,0	0/1:7,0:7:28.75:52,0,29	0/1:6,0:6:1.42:49,0,1	1/1:0,30:30:68.42:513,68,0	1/1:2,32:34:64.80:615,65,0	1/1:0,16:16:30:200,30,0	1/1:3,31:34:45.22:574,45,0	1/1:2,23:25:74.25:539,74,0	1/1:1,29:30:60.19:530,60,0	1/1:1,20:21:56.66:451,57,0	1/1:0,22:22:56.44:417,56,0	1/1:2,17:19:50.13:403,50,0	1/1:3,24:26:48.52:504,49,0	1/1:2,27:29:78.27:585,78,0	1/1:1,26:27:71.40:531,71,0	1/1:0,10:10:26.81:201,27,0	1/1:0,6:6:17.88:134,18,0	1/1:0,15:15:43.76:270,44,0	1/1:0,28:28:83.34:626,83,0	1/1:2,11:13:5.94:50,6,0	1/1:2,15:17:23.54:306,24,0	1/1:0,18:18:38.60:283,39,0	1/1:0,11:10:14.91:118,15,0	1/1:0,21:21:59.52:445,60,0	1/1:1,23:24:68.17:486,68,0	1/1:4,29:33:95.13:708,95,0	1/1:2,9:11:15.20:96,15,0
chr10	22923826	.	T	TAC	2391.17	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-4.072;DP=833;FS=3.059;HRun=0;HaplotypeScore=157.1062;InbreedingCoeff=0.9850;MQ=54.32;MQ0=15;MQRankSum=2.931;QD=33.21;ReadPosRankSum=0.352;VQSLOD=5.1402;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:32:52.14:0,52,607	0/0:10,0:10:27.08:0,27,332	0/0:41,0:13:15.03:0,15,169	0/0:38,0:20:23.49:0,23,288	0/0:30,0:30:72.21:0,72,872	0/0:35,0:35:72.19:0,72,860	0/0:24,0:24:39.12:0,39,479	0/0:37,0:37:64.27:0,64,777	0/0:40,0:38:80.46:0,80,966	1/1:16,25:41:99:1547,99,0	1/1:13,18:31:32.04:966,32,0	0/0:25,0:25:51.16:0,51,622	0/0:31,0:32:77.96:0,78,897	0/0:25,0:24:57.18:0,57,700	0/0:31,0:30:81.25:0,81,993	0/0:35,0:35:75.13:0,75,1006	0/0:27,0:28:42.89:0,43,609	0/0:21,0:21:48.59:0,49,569	0/0:21,0:17:26.78:0,27,318	0/0:25,0:25:54.17:0,54,661	0/0:46,0:46:95.89:0,96,1162	0/0:26,0:26:60.18:0,60,744	0/0:17,0:17:39.12:0,39,478	0/0:32,0:32:54.14:0,54,663	0/0:29,0:28:60.13:0,60,707	0/0:32,1:33:18.04:0,18,743	0/0:27,0:28:65.95:0,66,754	0/0:16,0:16:30.09:0,30,367
chr10	22923874	.	CCACA	C	15078.54	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=0.924;DP=827;FS=0.000;HRun=0;HaplotypeScore=185.4596;InbreedingCoeff=0.9905;MQ=52.98;MQ0=28;MQRankSum=-1.243;QD=32.15;ReadPosRankSum=1.771;VQSLOD=4.6151;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,23:30:31.21:749,31,0	0/0:9,0:9:21.07:0,21,526	0/0:58,0:9:23.82:0,24,501	0/0:58,0:28:47.93:0,48,1002	1/1:4,22:26:53.97:903,54,0	1/1:14,18:33:57.19:916,57,0	1/1:5,26:31:54.16:887,54,0	1/1:12,36:48:99:1641,105,0	1/1:12,19:29:54.16:890,54,0	1/1:12,18:29:66.21:1073,66,0	1/1:5,8:13:24.08:389,24,0	1/1:5,19:23:9.46:727,9,0	1/1:4,21:25:60.20:992,60,0	1/1:6,24:29:63.21:1056,63,0	0/0:13,0:35:66.72:0,67,325	0/0:11,1:41:86.58:0,87,400	0/0:25,0:25:42.14:0,42,1051	0/0:22,0:24:57.05:0,57,1203	0/0:32,0:27:51.13:0,51,1222	0/0:23,0:23:51.18:0,51,1241	0/0:51,0:49:90.28:0,90,2145	1/1:6,15:21:48.09:765,48,0	1/1:4,16:19:33:563,33,0	1/1:7,18:25:51.17:867,51,0	1/1:6,14:19:39.09:619,39,0	1/1:9,17:26:48.15:789,48,0	1/1:4,18:22:51.17:843,51,0	1/1:1,11:12:24.08:409,24,0
chr10	22923927	.	AACACAC	A	2190.13	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-4.407;DP=798;FS=0.612;HRun=0;HaplotypeScore=281.3522;InbreedingCoeff=0.8145;MQ=46.80;MQ0=22;MQRankSum=-3.124;QD=30.85;ReadPosRankSum=4.180;VQSLOD=3.0471;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:34:43.95:0,44,855	0/0:4,0:11:20.96:0,21,385	0/0:34,0:16:15.05:0,15,378	0/0:31,0:21:10.28:0,10,263	0/0:17,0:19:18.02:0,18,277	0/0:42,0:40:54.10:0,54,1011	0/0:25,0:27:21.07:0,21,430	0/0:40,0:38:57.17:0,57,1214	0/0:11,0:26:8.94:0,9,134	0/0:25,0:24:44.93:0,45,1074	0/0:14,0:14:6.02:0,6,86	0/0:29,0:29:8.83:0,9,168	0/0:29,0:50:26.62:0,27,489	0/0:28,0:30:30:0,30,469	1/1:14,20:35:66.19:1247,66,0	1/1:14,19:36:21.76:1063,22,0	0/0:18,0:28:27.47:0,27,569	0/0:11,0:14:15.52:0,16,366	0/0:22,0:25:41.85:0,42,724	0/0:15,0:25:26.60:0,27,423	0/0:31,0:56:29.06:0,29,553	0/0:10,0:18:11.78:0,12,210	0/0:17,0:17:21.07:0,21,398	0/0:24,0:25:20.99:0,21,400	0/0:15,0:13:12.04:0,12,223	0/0:30,0:28:66.20:0,66,1409	0/0:21,0:24:40.62:0,41,744	0/0:13,0:12:12.04:0,12,219
chr10	22923953	.	C	CACACACACACA	12804.65	PASS	AB=0.999;AC=26;AF=0.464;AN=56;BaseQRankSum=11.560;DP=798;FS=12.630;HRun=0;HaplotypeScore=318.6713;InbreedingCoeff=-0.5798;MQ=54.88;MQ0=21;MQRankSum=-12.814;QD=19.28;ReadPosRankSum=6.117;VQSLOD=2.0301;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:42,0:37:99:375,0,280	0/1:11,0:10:49.36:197,0,49	0/0:34,0:22:66.20:0,66,955	0/0:31,0:23:52.71:0,53,742	0/1:11,0:10:17.14:544,0,17	0/1:40,0:38:99:1085,0,257	0/1:26,0:26:99:561,0,217	0/1:44,0:40:99:648,0,832	0/1:27,0:27:99:473,0,123	1/1:14,13:28:68.88:1907,69,0	1/1:3,13:19:12:474,12,0	0/1:36,0:34:99:348,0,363	0/1:51,0:49:99:914,0,255	0/1:31,0:31:99:662,0,240	0/0:37,0:37:99:0,105,2046	0/0:32,0:32:73.97:0,74,1596	0/1:26,0:25:99:161,0,165	0/1:11,0:11:93.81:238,0,94	0/1:31,0:29:99:193,0,585	0/1:27,0:25:99:257,0,274	0/1:50,0:50:46.79:47,0,241	0/1:24,0:24:99:303,0,224	0/1:14,0:13:99:239,0,102	0/1:27,0:27:99:275,0,159	0/1:17,0:13:99:212,0,199	0/1:31,0:30:99:1406,0,315	0/1:26,0:25:99:754,0,242	0/1:9,0:8:14.16:534,0,14
chr10	22924215	.	A	AGTGT	1688.40	PASS	AB=1.000;AC=39;AF=0.750;AN=52;BaseQRankSum=-0.810;DP=660;FS=1.199;HRun=0;HaplotypeScore=140.1268;InbreedingCoeff=0.3733;MQ=67.78;MQ0=18;MQRankSum=-0.873;QD=3.36;ReadPosRankSum=-0.496;VQSLOD=2.6653;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:31,0:28:5.86:96,6,0	0/1:14,0:13:0:0,0,0	./.	./.	1/1:18,0:16:3.01:47,3,0	1/1:25,0:24:2.76:20,3,0	1/1:34,0:34:8.39:103,8,0	0/1:15,0:15:0:0,0,0	1/1:18,0:17:2.96:19,3,0	1/1:20,0:19:8.35:30,8,0	0/0:6,0:7:5.88:0,6,38	1/1:23,0:22:11.48:117,11,0	1/1:33,0:30:21.13:185,21,0	1/1:20,0:18:6.02:87,6,0	1/1:26,0:26:19.08:210,19,0	1/1:19,6:28:6.02:138,6,0	0/0:18,0:21:11.51:0,12,93	0/0:10,0:14:8.07:0,8,66	0/1:14,0:13:0:0,0,0	0/0:20,0:19:2.80:0,3,13	0/1:36,0:36:14.26:14,0,46	1/1:19,0:18:2.97:33,3,0	1/1:12,0:12:0.62:46,1,0	0/1:29,0:27:20.47:20,0,28	1/1:23,0:21:12.01:119,12,0	1/1:31,0:31:14.84:189,15,0	1/1:24,0:23:19.99:265,20,0	1/1:8,0:7:6.02:87,6,0
chr10	22924243	.	T	TGA	964.96	PASS	AB=0.964;AC=14;AF=0.250;AN=56;BaseQRankSum=1.461;DP=671;FS=10.295;HRun=0;HaplotypeScore=111.1507;InbreedingCoeff=-0.3523;MQ=45.71;MQ0=32;MQRankSum=2.225;QD=2.76;ReadPosRankSum=0.750;VQSLOD=1.8440;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:36,0:32:19.79:20,0,165	0/0:13,0:12:23.65:0,24,196	0/0:17,0:6:8.23:0,8,100	0/0:38,0:11:20.11:0,20,189	0/1:13,1:12:21.05:21,0,115	0/1:20,1:20:86.72:87,0,114	0/1:42,1:42:99:167,0,288	0/1:24,0:23:51.39:51,0,217	0/1:16,0:15:54.41:54,0,58	0/0:28,0:27:72.85:0,73,612	0/0:16,0:15:20.81:0,21,194	0/1:23,1:22:97.86:101,0,98	0/1:26,0:23:53.39:53,0,186	0/1:24,0:22:76.68:174,0,77	0/0:27,0:26:15.75:0,16,312	0/0:31,0:31:51.27:0,51,458	0/0:23,0:22:38.87:0,39,306	0/0:18,0:18:37.76:0,38,284	0/0:11,0:11:32.95:0,33,283	0/0:20,0:19:38.85:0,39,306	0/0:49,0:47:87.39:0,87,688	0/1:12,8:20:39.55:40,0,102	0/1:12,0:11:19.09:19,0,78	0/1:32,0:29:75.39:75,0,127	0/0:21,0:16:2.05:0,2,46	0/1:32,0:30:99:168,0,234	0/1:23,0:22:88.24:88,0,203	0/0:10,0:7:12.40:0,12,65
chr10	22924425	.	C	CT	7550.30	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=-11.638;DP=581;FS=4.719;HRun=10;HaplotypeScore=63.3032;InbreedingCoeff=0.9707;MQ=82.14;MQ0=0;MQRankSum=-2.345;QD=21.57;ReadPosRankSum=1.193;VQSLOD=5.9573;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,25:28:57.14:602,57,0	0/0:14,0:14:38.94:0,39,320	0/0:28,0:29:61.13:0,61,473	0/0:13,0:14:19.70:0,20,139	1/1:3,14:17:11.45:327,11,0	1/1:7,14:21:11.45:327,11,0	1/1:5,17:22:7.76:494,8,0	1/1:8,23:32:62.31:691,62,0	1/1:3,14:18:47.94:485,48,0	0/0:25,0:25:50.89:0,51,419	0/0:30,1:31:42.91:0,43,557	1/1:3,10:14:32.92:334,33,0	1/1:7,12:19:30.96:322,31,0	1/1:6,22:28:14.08:559,14,0	0/0:23,0:23:59.89:0,60,492	0/0:13,1:14:14.81:0,15,269	0/0:17,0:18:43.97:0,44,351	0/0:14,0:14:26.74:0,27,212	0/0:13,0:13:32.96:0,33,271	0/0:22,0:22:53.85:0,54,436	0/0:14,0:14:41.95:0,42,345	1/1:2,18:20:48:475,48,0	1/1:5,15:21:41.93:424,42,0	1/1:4,26:30:69.17:736,69,0	1/1:6,23:29:16.88:590,17,0	1/1:3,16:20:26.29:459,26,0	1/1:2,14:16:33.08:352,33,0	1/1:1,13:15:17.29:373,17,0
chr10	22925685	.	TA	T	8905.57	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-1.226;DP=399;FS=17.349;HRun=9;HaplotypeScore=42.2575;InbreedingCoeff=0.8879;MQ=75.31;MQ0=0;MQRankSum=-6.117;QD=23.56;ReadPosRankSum=4.086;VQSLOD=3.5907;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,12:12:33.02:302,33,0	1/1:0,10:10:30.02:275,30,0	0/0:15,0:14:32.14:0,32,329	0/0:6,0:6:5.93:0,6,49	1/1:2,25:27:68.98:622,69,0	1/1:2,25:27:75.04:686,75,0	1/1:0,6:6:18.01:165,18,0	1/1:4,20:24:59.99:538,60,0	1/1:0,6:6:18.01:165,18,0	1/1:1,17:18:53.97:477,54,0	1/1:4,26:30:69.02:630,69,0	1/1:1,13:14:36.01:329,36,0	1/1:2,9:11:24.01:220,24,0	1/1:1,8:9:21:192,21,0	1/1:0,12:12:36.02:329,36,0	1/1:1,5:6:15.01:137,15,0	1/1:2,18:20:48.02:439,48,0	1/1:1,12:13:36.02:329,36,0	1/1:3,13:16:38.99:347,39,0	1/1:3,16:19:44.98:404,45,0	1/1:2,6:8:15.01:137,15,0	1/1:1,4:5:12.01:110,12,0	1/1:0,11:11:33.02:302,33,0	1/1:2,6:8:15:137,15,0	1/1:1,11:12:30.02:275,30,0	1/1:1,25:26:75.03:682,75,0	1/1:2,19:21:56.92:510,57,0	1/1:0,7:7:18.01:165,18,0
chr10	22926614	.	TA	T	8296.64	PASS	AB=0.564;AC=35;AF=0.625;AN=56;BaseQRankSum=14.956;DP=525;FS=2.574;HRun=8;HaplotypeScore=64.7089;InbreedingCoeff=0.8764;MQ=68.14;MQ0=0;MQRankSum=0.207;QD=24.05;ReadPosRankSum=0.439;VQSLOD=5.6550;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,17:18:51.08:492,51,0	0/0:9,0:9:21.06:0,21,254	0/0:7,0:7:15.04:0,15,167	0/0:9,0:6:0.01:0,0,59	1/1:3,26:29:78.12:753,78,0	1/1:2,29:31:81.13:782,81,0	1/1:1,10:11:27.04:261,27,0	1/1:8,24:32:72.06:677,72,0	1/1:2,14:16:39.06:377,39,0	0/0:27,0:27:69.21:0,69,826	0/0:33,0:32:99:0,99,1186	1/1:0,13:13:39.06:377,39,0	1/1:2,17:19:45.07:434,45,0	1/1:1,23:24:60.10:579,60,0	1/1:0,8:8:24.04:232,24,0	1/1:2,12:14:36.06:348,36,0	0/0:17,0:17:51.16:0,51,613	0/0:11,0:11:30.09:0,30,362	0/0:18,0:18:48.15:0,48,580	0/0:38,0:38:96.28:0,96,1150	0/0:11,0:11:30.08:0,30,350	1/1:2,4:6:12.02:116,12,0	1/1:2,21:23:60.09:579,60,0	1/1:1,13:14:36.06:348,36,0	1/1:3,17:20:45.07:435,45,0	0/1:5,17:22:15.40:435,0,15	1/1:2,36:38:96.15:927,96,0	1/1:0,7:7:15.02:145,15,0
chr10	22928546	.	T	TGAGA	1376.16	PASS	AB=0.837;AC=35;AF=0.921;AN=38;BaseQRankSum=0.159;DP=353;FS=3.079;HRun=0;HaplotypeScore=80.5817;InbreedingCoeff=-0.0066;MQ=63.52;MQ0=13;MQRankSum=-0.923;QD=5.13;ReadPosRankSum=0.350;VQSLOD=1.9010;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:19:8.83:62,9,0	./.	./.	./.	./.	1/1:7,0:7:3.85:22,4,0	1/1:17,0:17:5.87:116,6,0	1/1:26,0:25:3.92:22,4,0	1/1:16,0:14:8.88:126,9,0	1/1:23,0:21:14.62:163,15,0	./.	1/1:8,0:8:3.01:51,3,0	./.	1/1:12,0:12:7.84:128,8,0	1/1:8,1:13:5.98:72,6,0	0/1:12,1:17:37.43:114,0,37	1/1:13,0:14:5.96:45,6,0	0/1:13,5:19:5.35:240,0,5	./.	1/1:6,0:6:3.01:38,3,0	./.	./.	0/1:11,0:8:0:0,0,0	1/1:17,0:17:3:29,3,0	1/1:15,0:15:3.01:38,3,0	1/1:13,0:13:9.02:139,9,0	1/1:10,0:9:3.01:58,3,0	1/1:2,0:1:0.47:1,0,0
chr10	22928671	.	GGAAC	G	6144.18	PASS	AB=1.000;AC=52;AF=0.929;AN=56;BaseQRankSum=-5.197;DP=346;FS=0.000;HRun=0;HaplotypeScore=68.3997;InbreedingCoeff=-0.1166;MQ=42.67;MQ0=2;MQRankSum=1.213;QD=17.76;ReadPosRankSum=-1.799;VQSLOD=3.5987;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,5:9:20.96:311,21,0	1/1:12,1:12:14.86:160,15,0	0/1:17,0:9:10.72:77,0,11	0/1:10,0:8:25.90:117,0,26	1/1:8,6:13:18.34:182,18,0	1/1:1,5:6:10.59:174,11,0	1/1:2,12:14:33.07:586,33,0	1/1:15,5:17:31.56:250,32,0	1/1:9,7:13:32.22:467,32,0	0/1:26,0:24:99:143,0,124	0/1:13,0:12:62.70:63,0,123	1/1:2,3:5:14.72:237,15,0	1/1:2,6:8:8.65:132,9,0	1/1:4,7:11:27.02:435,27,0	1/1:4,5:9:5.19:274,5,0	1/1:4,7:11:3.85:182,4,0	1/1:12,0:12:18.01:128,18,0	1/1:8,0:7:2.50:21,3,0	1/1:10,0:9:21.64:122,22,0	1/1:18,0:18:25.81:114,26,0	1/1:6,0:5:6.12:28,6,0	1/1:6,6:12:19.11:257,19,0	1/1:5,7:12:17:136,17,0	1/1:1,12:13:14.84:221,15,0	1/1:9,20:28:30.38:399,30,0	1/1:6,12:17:42.66:760,43,0	1/1:1,1:2:2.47:56,2,0	1/1:0,3:3:6.02:114,6,0
chr10	22929301	.	GA	G	3402.66	PASS	AB=0.898;AC=36;AF=0.643;AN=56;BaseQRankSum=0.646;DP=445;FS=24.169;HRun=2;HaplotypeScore=102.6494;InbreedingCoeff=-0.0895;MQ=27.30;MQ0=33;MQRankSum=1.944;QD=8.20;ReadPosRankSum=1.262;VQSLOD=-0.2485;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:11,5:9:23.44:271,23,0	0/1:6,1:7:9.67:23,0,10	0/0:9,0:1:3.01:0,3,45	0/0:9,0:1:3.01:0,3,45	0/1:17,4:19:3.52:86,0,4	1/1:13,2:12:11.82:103,12,0	0/1:16,0:9:20.02:20,0,36	0/1:23,2:11:87.68:88,0,105	1/1:6,0:5:8.86:100,9,0	1/1:23,5:24:25.26:354,25,0	1/1:14,2:16:2.91:142,3,0	1/1:12,1:9:2.60:10,3,0	1/1:3,1:3:6:62,6,0	1/1:2,1:2:5.89:39,6,0	1/1:2,7:9:10.11:126,10,0	0/1:12,2:12:74.46:84,0,74	1/1:12,3:14:11.88:114,12,0	0/0:10,0:8:6.23:0,6,19	0/1:17,0:8:17.52:40,0,18	0/1:28,1:26:20.14:173,0,20	0/1:26,7:21:73.78:220,0,74	1/1:27,6:30:36.48:417,36,0	0/1:14,4:18:9.94:152,0,10	0/1:13,3:12:32.06:102,0,32	1/1:26,2:25:35.33:328,35,0	0/1:20,6:20:1.97:320,0,2	0/0:2,0:2:0.47:0,0,1	0/1:7,0:7:10.15:27,0,10
chr10	22929302	.	A	AAGG	4673.05	PASS	AB=0.956;AC=38;AF=0.679;AN=56;BaseQRankSum=-2.275;DP=440;FS=26.311;HRun=0;HaplotypeScore=111.1039;InbreedingCoeff=-0.0285;MQ=27.45;MQ0=33;MQRankSum=-0.574;QD=11.40;ReadPosRankSum=-1.227;VQSLOD=2.4370;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:15,2:10:6.90:303,0,7	1/1:7,0:7:14.78:117,15,0	0/0:9,0:1:3.01:0,3,49	0/0:9,0:1:3.01:0,3,49	1/1:21,0:19:11.72:90,12,0	1/1:9,6:12:11.07:199,11,0	0/1:16,0:9:11.15:11,0,42	0/1:27,0:13:99:142,0,114	0/1:3,3:5:16:158,0,16	0/1:30,0:26:45.59:139,0,46	1/1:16,0:16:5.04:133,5,0	1/1:12,0:8:3.01:62,3,0	1/1:4,0:3:6:63,6,0	1/1:4,0:3:5.88:44,6,0	1/1:9,0:9:6.36:103,6,0	0/1:12,0:10:93.79:94,0,109	0/1:13,0:13:12.42:93,0,12	0/0:10,0:8:8.93:0,9,76	0/1:17,0:8:47.18:69,0,47	1/1:28,0:25:38.01:394,38,0	0/1:33,0:21:72.77:269,0,73	1/1:31,2:30:23.43:473,23,0	1/1:11,6:17:21.82:314,22,0	0/1:13,0:9:26.41:149,0,26	1/1:23,6:26:48.29:720,48,0	1/1:21,3:18:15.02:466,15,0	0/0:2,0:2:0.89:0,1,2	1/1:3,4:7:2.25:67,2,0
chr10	22929303	.	AG	A	4637.96	PASS	AB=0.892;AC=45;AF=0.804;AN=56;BaseQRankSum=3.427;DP=440;FS=53.576;HRun=3;HaplotypeScore=99.1338;InbreedingCoeff=0.0422;MQ=27.67;MQ0=32;MQRankSum=0.608;QD=10.99;ReadPosRankSum=0.883;VQSLOD=0.2699;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:15,2:10:23.48:146,23,0	1/1:5,2:7:14.03:107,14,0	0/0:9,0:1:3.01:0,3,40	0/0:9,0:1:3.01:0,3,42	1/1:15,6:19:17.96:184,18,0	1/1:10,5:12:7.35:69,7,0	0/1:12,4:9:34.49:60,0,34	0/1:26,1:13:63.91:64,0,98	1/1:7,0:6:11.65:68,12,0	1/1:18,12:26:29.17:612,29,0	1/1:11,5:16:26.70:256,27,0	0/1:13,0:9:11.59:12,0,19	1/1:3,0:2:2.69:14,3,0	0/1:3,1:3:15.96:45,0,16	1/1:7,2:9:14.88:122,15,0	0/1:10,2:10:62.42:112,0,62	1/1:12,2:14:23.66:188,24,0	1/1:10,0:8:8.73:49,9,0	1/1:12,4:8:18.11:195,18,0	1/1:19,9:25:48.84:468,49,0	0/1:30,4:21:42.32:286,0,42	1/1:15,18:30:71.65:690,72,0	1/1:13,4:17:21.70:206,22,0	0/1:12,1:9:27.04:27,0,32	1/1:15,13:25:39.07:415,39,0	1/1:18,5:18:23.32:189,23,0	1/1:0,2:2:2.96:19,3,0	1/1:6,1:7:5.67:36,6,0
chr10	22929304	.	G	GGGA	3595.32	PASS	AB=0.959;AC=38;AF=0.679;AN=56;BaseQRankSum=0.093;DP=447;FS=55.412;HRun=0;HaplotypeScore=122.2684;InbreedingCoeff=-0.0073;MQ=27.94;MQ0=29;MQRankSum=-0.867;QD=8.48;ReadPosRankSum=3.580;VQSLOD=0.8876;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:10:4.87:62,5,0	1/1:3,4:7:14.85:235,15,0	0/0:9,0:1:2.98:0,3,22	0/0:9,0:1:3:0,3,25	1/1:20,0:18:12.10:66,12,0	1/1:15,0:13:11.60:95,12,0	0/1:16,0:9:18.16:18,0,34	0/1:27,0:13:50.78:51,0,121	1/1:6,0:6:6.38:65,6,0	0/1:33,0:29:49.98:217,0,50	0/1:18,0:18:1.94:197,0,2	0/1:6,2:9:18.80:44,0,19	0/0:3,0:2:5.62:0,6,30	0/1:4,0:3:29.58:30,0,33	1/1:9,0:9:5.06:15,5,0	0/1:12,0:10:22.36:22,0,78	1/1:14,0:14:11.37:135,11,0	1/1:10,0:8:9.01:45,9,0	1/1:15,1:9:23.14:234,23,0	1/1:17,8:26:46.46:600,46,0	0/1:32,2:21:53.78:320,0,54	1/1:35,0:32:44.91:362,45,0	1/1:16,0:17:20.94:203,21,0	0/1:12,0:8:13.52:14,0,44	1/1:30,0:27:37.57:408,38,0	0/1:23,0:18:55.21:108,0,55	0/0:2,0:2:0:0,0,0	1/1:7,0:7:7.15:48,7,0
chr10	22929315	.	AAGGG	A	872.55	PASS	AB=0.960;AC=19;AF=0.380;AN=50;BaseQRankSum=5.408;DP=425;FS=26.047;HRun=0;HaplotypeScore=137.5418;InbreedingCoeff=-0.1440;MQ=29.19;MQ0=24;MQRankSum=-3.424;QD=3.05;ReadPosRankSum=-2.020;VQSLOD=0.5160;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:11:4.26:0,4,408	0/0:7,0:7:8.81:0,9,65	./.	./.	1/1:16,0:15:14.42:89,14,0	0/0:19,0:17:15.24:0,15,294	0/0:13,0:7:3.41:0,3,19	0/0:21,0:13:29.69:0,30,370	0/1:7,0:7:0.04:0,0,151	0/1:29,1:25:28.45:145,0,28	1/1:13,2:15:22.22:189,22,0	0/0:8,0:7:6:0,6,95	0/1:5,0:4:8.93:9,0,105	0/1:6,0:5:3.63:4,0,85	0/0:9,0:9:11.58:0,12,110	0/1:9,2:10:58.67:59,0,137	0/1:13,2:14:86.77:87,0,139	1/1:7,0:7:7.70:35,8,0	0/1:14,1:11:25.78:94,0,26	0/1:28,2:26:47.25:123,0,47	0/1:32,2:22:21.61:22,0,264	0/1:31,0:27:63.15:63,0,142	0/1:14,0:14:12.07:12,0,133	0/0:13,0:10:11.76:0,12,191	0/1:26,0:24:11.20:11,0,491	0/1:23,1:20:84.61:85,0,411	./.	0/0:6,0:6:3.01:0,3,56
chr10	22929340	.	AGGAG	A	2431.57	PASS	AB=0.955;AC=23;AF=0.426;AN=54;BaseQRankSum=8.765;DP=513;FS=29.463;HRun=0;HaplotypeScore=145.1691;InbreedingCoeff=-0.7564;MQ=31.35;MQ0=31;MQRankSum=-5.747;QD=5.75;ReadPosRankSum=-1.637;VQSLOD=1.1514;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:18,0:13:61.63:62,0,186	0/1:6,0:6:12.10:12,0,65	0/0:12,0:1:3.01:0,3,43	./.	0/1:18,1:16:99:114,0,107	0/1:17,2:17:99:110,0,410	0/0:23,0:13:13.08:0,13,222	0/0:35,0:23:38.31:0,38,900	0/1:10,0:9:5.80:6,0,200	0/1:30,0:28:40.71:41,0,412	0/1:19,0:18:99:178,0,120	0/1:11,1:11:74.47:74,0,110	0/1:10,2:11:99:113,0,141	0/1:10,11:20:99:141,0,107	0/1:16,0:16:86.03:86,0,237	0/1:11,0:9:69.69:70,0,144	0/1:12,0:10:74.82:75,0,126	0/1:10,0:10:61.70:62,0,78	0/1:25,0:15:29.15:29,0,582	0/1:22,0:19:99:150,0,306	0/1:28,0:14:33.48:33,0,165	0/1:29,2:28:99:251,0,215	0/1:15,2:17:99:193,0,104	0/1:16,0:13:66.90:67,0,130	0/1:32,4:33:99:286,0,488	0/1:28,2:27:99:393,0,450	0/1:3,0:3:8.74:36,0,9	0/0:7,0:6:3.01:0,3,41
chr10	22929395	.	AAGGC	A	5410.54	PASS	AB=0.955;AC=32;AF=0.571;AN=56;BaseQRankSum=-3.507;DP=644;FS=2.132;HRun=0;HaplotypeScore=170.1177;InbreedingCoeff=0.3144;MQ=57.04;MQ0=10;MQRankSum=-2.728;QD=10.91;ReadPosRankSum=-3.328;VQSLOD=4.1620;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:23:47.45:353,47,0	0/1:7,0:7:11.09:11,0,85	0/0:23,0:19:57.09:0,57,1185	0/0:17,0:14:39:0,39,630	1/1:22,0:22:5.68:257,6,0	0/1:22,0:20:23.72:281,0,24	0/1:26,0:24:36.89:212,0,37	1/1:32,0:30:43.04:477,43,0	0/1:15,0:15:7.39:135,0,7	0/1:26,0:25:9.14:9,0,408	0/1:13,0:13:14.93:15,0,203	1/1:27,0:25:47.63:394,48,0	0/1:7,34:40:19.17:121,0,19	1/1:22,0:22:38.84:363,39,0	0/0:18,0:18:24.82:0,25,360	0/0:20,0:19:41.62:0,42,425	0/0:19,0:19:28.67:0,29,254	0/0:21,0:21:20.65:0,21,319	0/1:24,0:19:24.14:24,0,301	0/1:23,0:22:2.56:3,0,265	0/0:30,0:27:12.39:0,12,307	1/1:23,0:21:41.84:403,42,0	1/1:20,0:20:44.72:382,45,0	1/1:33,0:30:49.62:411,50,0	0/1:32,0:32:3.94:494,0,4	1/1:35,0:35:77.31:738,77,0	1/1:19,0:19:27.58:265,28,0	1/1:10,0:10:6.21:62,6,0
chr10	22930534	.	ACACACG	A	2365.27	PASS	AB=0.944;AC=29;AF=0.537;AN=54;BaseQRankSum=-7.039;DP=410;FS=1.176;HRun=0;HaplotypeScore=158.7969;InbreedingCoeff=-0.2095;MQ=40.50;MQ0=14;MQRankSum=0.434;QD=6.92;ReadPosRankSum=-1.796;VQSLOD=2.4861;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:18,2:20:18.09:33,0,18	1/1:3,0:3:9.01:110,9,0	0/1:18,0:6:6.96:7,0,47	0/0:18,0:6:11.37:0,11,109	0/0:17,0:17:3.03:0,3,269	0/0:11,2:13:2.69:0,3,16	1/1:12,2:13:9.45:72,9,0	0/1:13,6:16:1.10:407,0,1	0/1:11,1:12:16.56:17,0,31	0/1:18,0:16:29.41:29,0,395	0/1:17,0:17:45.18:45,0,101	0/1:15,0:14:53.48:119,0,53	0/1:10,1:10:21.04:116,0,21	0/1:17,0:16:49.60:50,0,87	0/0:11,0:10:20.73:0,21,410	0/0:9,0:9:3.99:0,4,333	1/1:16,0:16:5.97:63,6,0	1/1:11,0:11:5.89:56,6,0	1/1:9,1:6:12.01:184,12,0	1/1:17,1:18:30.90:465,31,0	1/1:7,0:6:5.22:32,5,0	0/1:19,1:19:50.41:50,0,107	0/1:10,2:12:12.66:19,0,13	0/1:25,0:25:16.13:95,0,16	0/1:30,2:32:99:370,0,180	0/1:15,2:16:99:170,0,299	0/1:9,0:7:16.88:17,0,265	./.
chr10	22930536	.	ACACG	A	2162.02	PASS	AB=1.000;AC=32;AF=0.593;AN=54;BaseQRankSum=-7.243;DP=410;FS=6.709;HRun=0;HaplotypeScore=152.4339;InbreedingCoeff=-0.0891;MQ=40.18;MQ0=14;MQRankSum=0.807;QD=6.16;ReadPosRankSum=-3.797;VQSLOD=1.2625;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:20:2.27:38,2,0	1/1:1,2:3:9.01:135,9,0	0/1:19,0:6:5.26:5,0,69	0/0:18,0:5:4.66:0,5,73	0/1:18,0:18:27.06:27,0,133	0/0:13,0:13:2.77:0,3,28	1/1:15,0:14:12.44:97,12,0	1/1:17,1:15:4.23:260,4,0	0/1:13,0:12:15.96:16,0,44	0/1:18,0:16:60.41:60,0,175	0/1:17,0:17:49.49:76,0,49	0/1:15,0:14:66.42:84,0,66	1/1:11,0:10:6.79:48,7,0	0/1:17,0:16:29.73:36,0,30	0/0:11,0:10:8.95:0,9,313	0/0:8,0:8:3.99:0,4,260	1/1:1,15:16:6.02:109,6,0	1/1:3,8:11:6.02:111,6,0	1/1:7,3:6:14.97:183,15,0	1/1:6,12:18:36.04:576,36,0	1/1:6,2:7:6:52,6,0	0/1:20,0:19:53.38:53,0,76	0/1:11,0:11:16.42:19,0,16	0/1:24,0:24:40.77:59,0,41	0/1:32,0:32:99:170,0,153	0/1:17,0:16:99:112,0,225	0/0:9,0:7:15.35:0,15,181	./.
chr10	22930538	.	ACG	A	2141.03	PASS	AB=0.992;AC=42;AF=0.778;AN=54;BaseQRankSum=-6.296;DP=406;FS=6.646;HRun=0;HaplotypeScore=147.3104;InbreedingCoeff=0.1928;MQ=40.61;MQ0=13;MQRankSum=1.854;QD=5.65;ReadPosRankSum=-2.724;VQSLOD=2.0385;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:20:5.16:43,5,0	1/1:3,0:3:8.98:73,9,0	0/1:19,0:6:30.04:30,0,46	0/1:18,0:5:2.16:2,0,34	0/1:20,1:21:4.10:96,0,4	1/1:12,0:13:3.88:27,4,0	1/1:15,0:14:12.44:97,12,0	1/1:16,1:14:34.22:253,34,0	0/1:12,0:12:6.20:18,0,6	1/1:18,0:16:15.73:189,16,0	1/1:18,0:18:10.71:80,11,0	1/1:15,0:14:3.85:89,4,0	1/1:12,0:11:18.30:131,18,0	1/1:14,1:14:0.16:61,0,0	0/0:10,0:9:8.95:0,9,232	0/0:8,0:8:3.97:0,4,191	1/1:16,0:16:5.96:44,6,0	1/1:8,0:8:5.96:44,6,0	1/1:9,0:6:14.91:119,15,0	1/1:16,2:18:38.89:336,39,0	1/1:9,0:8:8.21:55,8,0	0/1:20,0:19:1.95:78,0,2	1/1:11,0:11:3.88:27,4,0	1/1:23,0:23:2.81:59,3,0	0/1:31,0:31:2.41:191,0,2	1/1:17,0:16:2.39:137,2,0	0/0:9,0:7:3.87:0,4,37	./.
chr10	22930539	.	C	CACACA	1872.32	PASS	AB=0.967;AC=26;AF=0.481;AN=54;BaseQRankSum=-1.159;DP=405;FS=7.964;HRun=0;HaplotypeScore=165.0739;InbreedingCoeff=0.0568;MQ=40.71;MQ0=13;MQRankSum=1.195;QD=6.26;ReadPosRankSum=0.754;VQSLOD=1.8836;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:19,1:20:14.19:89,0,14	0/1:3,0:3:13.94:14,0,52	0/0:19,0:6:1.33:0,1,81	0/0:16,0:5:12.01:0,12,130	0/1:21,0:21:72.52:73,0,75	1/1:13,0:13:2.37:8,2,0	1/1:15,0:14:8.36:70,8,0	0/1:16,0:13:15.79:16,0,74	1/1:11,2:12:9.02:172,9,0	0/1:18,0:16:46.08:46,0,94	0/1:18,0:18:2.76:3,0,24	0/1:14,0:14:13.70:96,0,14	0/1:12,0:11:1.38:59,0,1	0/1:12,2:14:0.63:160,0,1	0/0:10,0:9:14.77:0,15,188	0/0:8,0:8:14.93:0,15,189	0/0:16,0:16:5.99:0,6,52	0/0:8,0:8:6.01:0,6,56	0/0:10,0:6:14.87:0,15,116	0/0:18,0:18:14.44:0,14,304	0/1:9,0:8:16.56:17,0,32	0/1:18,2:20:2:152,0,2	1/1:9,2:11:6:52,6,0	1/1:21,1:22:0.05:117,0,0	1/1:27,4:31:13.89:506,14,0	1/1:14,2:16:3.96:318,4,0	0/1:9,0:7:9.34:64,0,9	./.
chr10	22930540	.	G	GA	61.62	PASS	AB=0.929;AC=11;AF=0.204;AN=54;BaseQRankSum=2.025;DP=411;FS=9.699;HRun=0;HaplotypeScore=154.7260;InbreedingCoeff=-0.0495;MQ=40.12;MQ0=14;MQRankSum=-1.848;QD=0.34;ReadPosRankSum=0.775;VQSLOD=2.3519;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:19,1:20:13.36:25,0,13	0/0:3,0:3:4.40:0,4,13	0/0:20,0:6:17.66:0,18,154	0/0:16,0:4:12.01:0,12,123	0/0:22,0:22:29.83:0,30,153	0/1:13,0:14:11.04:18,0,11	0/1:13,0:12:1.33:1,0,12	0/0:17,0:14:32.53:0,33,190	1/1:10,2:11:5.97:44,6,0	0/0:18,0:16:24.60:0,25,240	0/0:19,0:19:14.53:0,15,82	0/0:14,1:14:21.25:0,21,111	0/1:12,0:11:21.84:22,0,57	0/1:12,3:14:16.72:17,0,39	0/0:10,0:9:19.71:0,20,200	0/0:8,0:8:16.97:0,17,169	0/0:16,0:16:4.72:0,5,16	0/0:9,0:9:3.93:0,4,14	0/0:10,0:6:12.79:0,13,64	0/0:19,0:18:31.29:0,31,126	0/0:9,0:8:7.48:0,7,38	0/1:18,3:20:9.12:9,0,35	0/0:8,2:10:2.57:0,3,11	0/1:23,1:24:5.51:6,0,59	0/1:30,4:34:41.37:41,0,130	0/1:13,3:15:14.71:15,0,139	0/0:9,0:7:15.03:0,15,79	./.
chr10	22930541	.	C	CACAG	1810.70	PASS	AB=0.971;AC=25;AF=0.463;AN=54;BaseQRankSum=-1.040;DP=414;FS=6.274;HRun=0;HaplotypeScore=162.9899;InbreedingCoeff=0.1642;MQ=40.21;MQ0=14;MQRankSum=-2.039;QD=6.29;ReadPosRankSum=0.923;VQSLOD=2.1487;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:19,1:20:11.96:55,0,12	0/0:2,0:2:6.01:0,6,59	0/0:19,0:5:8.38:0,8,76	0/0:16,0:4:12.02:0,12,134	0/1:22,1:23:8.47:127,0,8	0/1:13,1:14:16.08:18,0,16	1/1:12,0:12:0.46:1,0,0	0/1:18,0:15:8.10:116,0,8	1/1:12,0:11:6.02:124,6,0	0/1:18,0:16:1.84:2,0,119	0/0:19,0:19:11.76:0,12,75	0/1:14,1:14:25.10:131,0,25	1/1:13,0:12:11.09:92,11,0	1/1:15,0:14:0.37:80,0,0	0/1:10,0:9:10.21:10,0,74	0/0:7,0:7:2.69:0,3,57	0/0:16,0:16:5.96:0,6,47	0/0:9,0:9:5.99:0,6,53	0/0:10,0:6:11.93:0,12,101	0/0:19,0:18:36.25:0,36,319	0/0:9,0:8:4.26:0,4,42	0/1:21,1:21:45.60:162,0,46	1/1:10,0:10:2.90:36,3,0	1/1:25,0:25:8.15:124,8,0	1/1:33,2:35:2.83:482,3,0	1/1:16,0:15:12.58:362,13,0	0/1:9,0:7:0.42:49,0,0	./.
chr10	22930543	.	C	CAG	1357.69	PASS	AB=0.992;AC=19;AF=0.352;AN=54;BaseQRankSum=-0.150;DP=416;FS=14.481;HRun=0;HaplotypeScore=157.2443;InbreedingCoeff=0.1435;MQ=39.92;MQ0=15;MQRankSum=-0.644;QD=5.63;ReadPosRankSum=1.870;VQSLOD=2.6229;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:18,0:18:25.68:26,0,30	0/0:2,0:2:5.92:0,6,39	0/0:20,0:4:8.49:0,8,84	0/0:16,0:4:12.03:0,12,139	1/1:19,4:23:28.72:261,29,0	0/1:14,0:14:18.02:18,0,18	0/0:12,0:11:2.98:0,3,22	0/1:19,0:16:67.74:76,0,68	1/1:11,1:11:6.02:73,6,0	0/0:18,0:16:32.31:0,32,216	0/0:20,0:20:12.37:0,12,97	0/1:15,0:14:50.99:82,0,51	1/1:11,0:10:7.13:68,7,0	0/1:14,0:13:21.76:44,0,22	0/0:10,0:9:14.96:0,15,156	0/0:8,0:8:11.97:0,12,130	0/0:19,0:19:5.88:0,6,36	0/0:11,0:11:8.91:0,9,61	0/0:10,0:6:14.29:0,14,84	0/0:20,0:19:34.93:0,35,225	0/0:9,0:8:4.24:0,4,42	0/1:21,1:21:96.42:96,0,111	1/1:10,1:11:2.90:57,3,0	1/1:24,0:24:12.32:127,12,0	0/1:32,1:33:19.22:381,0,19	0/1:16,0:15:2.13:193,0,2	0/1:9,0:7:23.26:23,0,64	./.
chr10	22930551	.	GACAC	G	1030.42	PASS	AB=1.000;AC=13;AF=0.241;AN=54;BaseQRankSum=-2.555;DP=419;FS=5.182;HRun=0;HaplotypeScore=162.8910;InbreedingCoeff=0.6242;MQ=38.06;MQ0=15;MQRankSum=-1.766;QD=12.12;ReadPosRankSum=-0.194;VQSLOD=3.1434;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:5.10:0,5,31	1/1:1,2:3:8.98:117,9,0	0/0:26,0:6:9.80:0,10,161	0/0:13,0:2:2.37:0,2,8	0/0:23,0:23:24.45:0,24,340	0/0:15,0:15:8.37:0,8,100	0/0:14,0:13:2.74:0,3,12	0/0:19,0:17:23.49:0,23,183	0/0:13,0:12:6.02:0,6,89	0/1:15,0:15:69.78:70,0,301	0/0:19,0:19:5.66:0,6,78	0/0:15,0:14:13.44:0,13,181	0/0:11,0:10:9.31:0,9,68	0/0:14,0:13:14.92:0,15,108	0/0:3,0:8:14.92:0,15,175	0/0:3,0:9:12.88:0,13,184	1/1:15,2:17:6:73,6,0	1/1:9,1:10:11.93:131,12,0	1/1:8,2:9:18.05:257,18,0	1/1:9,11:20:33.09:500,33,0	1/1:7,1:7:3.01:47,3,0	0/0:23,0:22:20.73:0,21,244	0/0:12,0:12:2.90:0,3,47	0/0:24,0:24:7.30:0,7,115	0/0:33,0:33:29.86:0,30,395	0/0:16,0:15:30.06:0,30,477	0/0:8,0:6:18.06:0,18,308	./.
chr10	22930625	.	A	AAAGAAAGG	11804.20	PASS	AB=0.927;AC=45;AF=0.804;AN=56;BaseQRankSum=-5.131;DP=537;FS=1.924;HRun=0;HaplotypeScore=139.5707;InbreedingCoeff=0.4481;MQ=42.89;MQ0=16;MQRankSum=0.242;QD=24.64;ReadPosRankSum=1.141;VQSLOD=4.6393;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:27,3:27:65.06:845,65,0	1/1:4,0:4:3.44:21,3,0	0/1:26,0:11:1.80:2,0,168	0/0:21,0:6:10.83:0,11,128	1/1:37,3:39:71.22:1142,71,0	1/1:13,4:17:30.03:818,30,0	1/1:8,0:7:17.94:168,18,0	1/1:23,0:19:44.71:351,45,0	1/1:3,7:11:11.99:309,12,0	1/1:3,2:26:63.87:794,64,0	1/1:1,0:21:20.88:243,21,0	1/1:26,1:27:53.87:875,54,0	1/1:12,3:14:27.04:594,27,0	1/1:8,8:16:14.78:209,15,0	0/0:30,0:29:55.64:0,56,408	0/0:7,0:7:17.38:0,17,101	0/1:21,0:18:3.54:248,0,4	1/1:9,0:6:10.27:119,10,0	1/1:13,0:13:34.67:503,35,0	0/1:14,0:20:14.57:298,0,15	1/1:1,0:1:2.84:14,3,0	1/1:16,2:17:35.69:709,36,0	1/1:10,4:13:27.94:699,28,0	0/1:32,0:33:12.82:377,0,13	1/1:26,4:28:41.94:869,42,0	1/1:6,15:20:45.53:692,46,0	1/1:15,4:15:38.89:839,39,0	0/1:6,0:4:19.58:65,0,20
chr10	22930649	.	G	GGA	844.64	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=2.871;DP=542;FS=19.194;HRun=0;HaplotypeScore=143.3705;InbreedingCoeff=0.5513;MQ=41.13;MQ0=17;MQRankSum=-2.827;QD=6.92;ReadPosRankSum=-2.660;VQSLOD=1.2595;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:22:23.81:0,24,483	1/1:4,0:4:1.27:42,1,0	0/0:44,0:14:27.94:0,28,319	0/0:31,0:8:16.87:0,17,197	0/0:39,0:35:46.74:0,47,844	0/0:13,0:13:11.07:0,11,121	0/0:7,0:6:6.02:0,6,77	0/0:23,0:22:63.15:0,63,773	0/0:9,0:9:12:0,12,135	0/0:25,0:25:57.09:0,57,674	0/0:20,0:20:21.52:0,22,254	0/0:26,0:25:39.06:0,39,464	0/0:13,0:12:14.05:0,14,143	0/0:14,0:14:15.05:0,15,181	0/1:34,0:33:30.42:30,0,510	0/1:8,0:8:32.88:33,0,60	1/1:18,2:16:3.31:115,3,0	1/1:3,3:3:9.03:143,9,0	1/1:16,0:13:27.09:394,27,0	1/1:23,0:23:14.70:205,15,0	1/1:0,1:1:3.01:45,3,0	0/0:16,0:16:17.04:0,17,171	0/0:19,0:15:8.33:0,8,248	0/0:28,0:27:35.92:0,36,389	0/0:23,0:21:20.42:0,20,142	0/0:22,0:19:3.92:0,4,499	0/0:22,0:16:45.03:0,45,514	0/1:10,0:7:3.35:3,0,48
chr10	22930656	.	G	GAGAA	2878.47	PASS	AB=1.000;AC=45;AF=0.900;AN=50;BaseQRankSum=-2.571;DP=541;FS=0.000;HRun=0;HaplotypeScore=139.8310;InbreedingCoeff=0.1856;MQ=42.17;MQ0=19;MQRankSum=-1.390;QD=6.19;ReadPosRankSum=-2.239;VQSLOD=2.2617;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:23:20.64:129,21,0	0/0:5,0:5:1.82:0,2,5	./.	./.	1/1:37,0:33:26.45:199,26,0	1/1:10,0:10:3.01:50,3,0	0/1:9,0:8:0:0,0,0	1/1:26,0:24:5.94:41,6,0	1/1:8,0:8:6.16:30,6,0	0/1:21,0:23:20.93:21,0,198	0/1:16,0:18:7.54:8,0,50	1/1:26,0:25:18.33:130,18,0	1/1:16,0:15:3.01:50,3,0	1/1:13,0:13:8.89:59,9,0	1/1:30,6:35:33.04:631,33,0	1/1:4,4:8:18.05:337,18,0	1/1:16,0:12:3.48:30,3,0	1/1:7,0:4:11.02:89,11,0	1/1:18,0:14:2.04:6,2,0	1/1:26,0:26:2.95:19,3,0	./.	1/1:17,0:17:8.98:94,9,0	1/1:20,0:16:20.73:191,21,0	1/1:25,0:24:9.40:81,9,0	1/1:22,0:20:12.03:174,12,0	1/1:22,0:19:17.93:177,18,0	1/1:26,0:20:24.79:179,25,0	1/1:10,0:7:18.05:257,18,0
chr10	22930658	.	GAAAGAAAGAAAGAAAGAA	G	1987.04	PASS	AB=0.975;AC=12;AF=0.214;AN=56;BaseQRankSum=1.119;DP=541;FS=7.612;HRun=0;HaplotypeScore=233.0315;InbreedingCoeff=0.6550;MQ=42.48;MQ0=18;MQRankSum=-3.460;QD=22.08;ReadPosRankSum=0.400;VQSLOD=1.5468;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:23:66.07:0,66,1616	1/1:0,5:5:6.02:202,6,0	0/0:39,0:12:27.94:0,28,338	0/0:28,0:7:16.60:0,17,196	0/0:38,0:34:90.31:0,90,2835	0/0:11,0:11:12.04:0,12,269	0/0:9,0:8:15.05:0,15,427	0/0:28,0:26:75.24:0,75,1275	0/0:9,0:9:15.01:0,15,430	0/0:22,0:22:58.19:0,58,917	0/1:18,0:19:99:104,0,376	0/0:27,0:26:54.15:0,54,1369	0/0:16,0:15:15.02:0,15,339	0/0:12,0:12:15.05:0,15,493	0/0:35,0:34:78.26:0,78,2801	0/0:8,0:8:24.08:0,24,1057	1/1:13,1:11:2.67:313,3,0	0/1:7,0:4:83.75:382,0,84	1/1:6,10:14:33.01:581,33,0	1/1:2,18:25:20.86:485,21,0	1/1:1,0:1:3.01:81,3,0	0/0:16,0:16:24.04:0,24,596	0/0:21,0:17:42.06:0,42,1400	0/0:24,0:23:45.32:0,45,855	0/0:23,0:21:23.98:0,24,768	0/0:22,0:19:27.36:0,27,1462	0/0:27,0:21:60.09:0,60,1710	0/0:10,0:7:21.07:0,21,637
chr10	22930678	.	G	GA	3168.90	PASS	AB=0.704;AC=18;AF=0.333;AN=54;BaseQRankSum=-6.407;DP=505;FS=2.224;HRun=3;HaplotypeScore=100.2630;InbreedingCoeff=-0.4217;MQ=44.90;MQ0=14;MQRankSum=-2.788;QD=9.27;ReadPosRankSum=-0.493;VQSLOD=0.9217;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:14,11:23:99:359,0,206	0/0:6,0:6:0.86:0,1,39	0/0:8,0:2:3.01:0,3,36	./.	0/1:27,13:38:99:395,0,669	1/1:1,0:13:2.98:21,3,0	0/1:4,5:9:44.64:185,0,45	0/1:14,18:29:99:598,0,255	0/1:5,3:8:62.40:124,0,62	0/0:20,1:21:17.39:0,17,589	0/0:20,0:20:41.59:0,42,454	0/1:17,9:26:99:288,0,159	0/1:4,0:15:14.97:15,0,30	0/1:11,2:13:83.68:95,0,84	0/0:32,0:31:38.21:0,38,494	0/0:13,0:13:21.88:0,22,281	0/0:15,0:11:6.75:0,7,23	0/1:8,0:5:3.62:4,0,54	0/0:17,0:13:21.04:0,21,228	0/0:18,0:18:6.01:0,6,63	0/0:2,0:2:6.02:0,6,70	0/1:3,2:20:43.42:246,0,43	0/1:9,10:16:99:265,0,103	0/1:14,10:23:99:199,0,172	0/1:2,0:24:53.95:83,0,54	0/1:15,5:17:99:182,0,229	0/1:16,8:18:99:199,0,278	0/1:10,0:17:61:61,0,85
chr10	22930680	.	A	AAGGG	399.80	PASS	AB=0.965;AC=11;AF=0.204;AN=54;BaseQRankSum=4.300;DP=501;FS=17.466;HRun=0;HaplotypeScore=130.5931;InbreedingCoeff=-0.0944;MQ=44.87;MQ0=13;MQRankSum=-2.708;QD=2.72;ReadPosRankSum=7.846;VQSLOD=0.5530;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:23:61.40:0,61,528	0/0:7,0:7:10.97:0,11,86	0/0:9,0:2:3.01:0,3,45	./.	0/0:39,0:37:99:0,100,1103	1/1:13,0:13:2.74:12,3,0	0/1:10,0:10:4.88:5,0,118	0/0:32,0:29:81.70:0,82,706	0/0:8,0:8:20.50:0,20,173	0/0:21,0:21:59.97:0,60,944	0/0:21,0:21:45.10:0,45,617	0/0:24,0:24:43.50:0,43,352	0/1:16,0:16:3.15:3,0,68	0/0:12,0:12:23.53:0,24,196	0/1:31,0:30:67.71:68,0,491	0/1:13,0:13:54.04:54,0,362	0/1:13,2:11:52.58:96,0,53	0/1:6,2:5:49.41:181,0,49	0/1:15,0:12:78:78,0,104	0/0:18,0:18:18.01:0,18,218	0/1:2,0:2:25:25,0,45	0/0:19,0:19:18.56:0,19,168	0/0:19,0:16:27.99:0,28,317	0/0:23,0:22:35.64:0,36,296	0/1:24,0:24:14.56:15,0,98	0/0:21,0:18:38.43:0,38,465	0/0:24,0:18:49.94:0,50,505	0/0:21,0:18:9.71:0,10,216
chr10	22930686	.	G	GA	1587.94	PASS	AB=0.848;AC=14;AF=0.269;AN=52;BaseQRankSum=2.576;DP=488;FS=2.406;HRun=3;HaplotypeScore=102.9412;InbreedingCoeff=-0.3618;MQ=44.38;MQ0=14;MQRankSum=-3.665;QD=5.69;ReadPosRankSum=3.780;VQSLOD=0.8083;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:18,9:23:99:248,0,341	0/0:7,0:7:8.97:0,9,80	./.	./.	0/0:38,1:37:25.98:0,26,569	0/1:12,0:12:8.25:8,0,30	0/0:7,2:9:21.05:0,21,230	0/1:27,5:29:99:126,0,631	0/1:7,3:9:93.36:93,0,152	0/0:19,0:19:38.96:0,39,455	0/0:17,0:17:38.65:0,39,404	0/1:16,6:22:99:185,0,261	0/1:16,0:16:2.49:2,0,85	0/1:7,5:12:80.57:155,0,81	0/0:26,0:25:34.10:0,34,456	0/0:14,0:14:27.92:0,28,342	0/0:13,0:10:12.04:0,12,142	0/0:8,0:5:15.04:0,15,166	0/0:19,0:14:26.11:0,26,287	0/0:20,0:20:21.06:0,21,245	0/0:2,0:2:6.02:0,6,71	0/1:18,0:18:17.10:17,0,220	0/1:14,5:16:99:166,0,244	0/1:16,6:21:99:187,0,203	0/1:22,0:22:16.71:29,0,17	0/1:15,6:18:99:169,0,217	0/1:18,6:18:99:220,0,225	0/1:18,4:19:99:129,0,149
chr10	22930690	.	G	GA	350.99	PASS	AB=0.878;AC=4;AF=0.074;AN=54;BaseQRankSum=4.483;DP=490;FS=9.736;HRun=3;HaplotypeScore=105.6032;InbreedingCoeff=0.2004;MQ=45.60;MQ0=13;MQRankSum=-4.284;QD=4.87;ReadPosRankSum=1.398;VQSLOD=-0.2084;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:23:1.53:2,0,397	0/0:7,0:7:9.02:0,9,97	1/1:7,1:1:2.74:12,3,0	./.	0/1:25,12:35:99:423,0,507	0/0:16,0:16:11.52:0,12,114	0/0:10,0:10:20.43:0,20,222	0/0:40,0:37:39.36:0,39,860	0/0:9,0:8:15.29:0,15,185	0/0:19,0:19:55.96:0,56,581	0/0:17,0:17:38.77:0,39,424	0/0:22,0:22:19.16:0,19,314	0/0:14,0:14:11.40:0,11,116	0/0:12,0:12:0.38:0,0,98	0/0:26,0:25:34.03:0,34,455	0/0:15,0:15:27.95:0,28,353	0/0:13,0:9:18.04:0,18,196	0/0:8,0:5:14.81:0,15,140	0/0:17,0:13:27.08:0,27,322	0/0:20,0:20:24.07:0,24,282	0/0:2,0:2:5.05:0,5,42	0/0:17,0:17:27:0,27,299	0/0:19,0:16:28.81:0,29,319	0/0:23,0:22:13.96:0,14,280	0/0:19,0:19:13.55:0,14,104	0/0:18,0:16:3.51:0,4,329	0/0:24,0:18:34.26:0,34,393	0/0:23,0:20:17.42:0,17,304
chr10	22932358	.	ATTC	A	2599.68	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=3.376;DP=428;FS=21.805;HRun=0;HaplotypeScore=88.4628;InbreedingCoeff=0.9229;MQ=78.38;MQ0=2;MQRankSum=-7.804;QD=33.33;ReadPosRankSum=-2.076;VQSLOD=1.4643;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:27.09:0,27,557	0/0:3,0:3:9.03:0,9,160	0/0:21,0:17:30.04:0,30,468	0/0:22,0:15:16.75:0,17,226	0/0:18,0:18:42.13:0,42,812	0/0:15,0:15:33.11:0,33,695	0/0:12,0:12:6.01:0,6,88	1/1:29,4:33:78.19:1036,78,0	0/0:14,0:14:21.06:0,21,414	0/0:16,0:17:51.17:0,51,1047	0/0:13,0:13:30.09:0,30,604	0/0:13,0:12:23.99:0,24,402	0/0:21,0:21:33.07:0,33,585	0/0:13,0:13:27.05:0,27,464	0/0:20,0:20:51.15:0,51,1025	0/0:23,0:23:66.21:0,66,1347	0/0:9,0:9:24.06:0,24,372	0/0:10,0:10:24.08:0,24,437	0/0:17,0:17:27.07:0,27,418	0/0:20,0:20:57.15:0,57,912	0/0:10,0:10:21.06:0,21,354	0/0:11,0:11:27.09:0,27,569	0/0:11,0:11:24.08:0,24,468	0/0:10,0:10:12.04:0,12,259	0/0:18,0:17:42.10:0,42,754	1/1:10,1:11:27.08:361,27,0	1/1:28,3:30:87.24:1228,87,0	1/1:3,0:3:9.03:129,9,0
chr10	22932363	.	TC	T	1316.81	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=6.025;DP=434;FS=19.034;HRun=1;HaplotypeScore=85.1583;InbreedingCoeff=0.9149;MQ=73.02;MQ0=2;MQRankSum=-7.923;QD=16.88;ReadPosRankSum=-0.540;VQSLOD=2.5289;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:30.08:0,30,406	0/0:3,0:3:8.21:0,8,66	0/0:21,0:16:31.71:0,32,346	0/0:21,0:12:19.87:0,20,207	0/0:19,0:19:47.52:0,48,568	0/0:16,0:16:39.06:0,39,519	0/0:11,0:11:6.01:0,6,60	1/1:12,16:28:77.43:606,77,0	0/0:16,0:16:21.05:0,21,282	0/0:18,0:18:51.10:0,51,671	0/0:13,0:13:30.09:0,30,399	0/0:14,0:13:26.98:0,27,301	0/0:23,0:23:38.97:0,39,434	0/0:13,0:13:30.06:0,30,364	0/0:19,0:19:51.14:0,51,692	0/0:25,0:25:72.08:0,72,947	0/0:9,0:9:22.74:0,23,148	0/0:11,0:11:23.30:0,23,193	0/0:10,0:10:28.93:0,29,241	0/0:22,0:22:52.69:0,53,461	0/0:9,1:10:14.69:0,15,151	0/0:11,0:11:12.10:0,12,344	0/0:12,0:12:32.82:0,33,341	0/0:10,0:10:15.05:0,15,205	0/0:17,0:16:42.07:0,42,519	1/1:7,6:13:22.79:206,23,0	1/1:16,18:33:54.52:586,55,0	1/1:0,3:3:8.98:75,9,0
chr10	22932369	.	TTTA	T	1340.07	PASS	AB=0.722;AC=7;AF=0.125;AN=56;BaseQRankSum=7.635;DP=451;FS=26.569;HRun=0;HaplotypeScore=106.2016;InbreedingCoeff=0.7130;MQ=77.53;MQ0=5;MQRankSum=-8.548;QD=17.63;ReadPosRankSum=0.884;VQSLOD=1.3516;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:39.12:0,39,806	0/0:3,0:3:9.01:0,9,107	0/0:30,0:22:38.26:0,38,578	0/0:27,0:14:9.63:0,10,107	0/0:19,0:19:48.16:0,48,959	0/0:19,0:19:48.13:0,48,966	0/0:13,0:13:12.02:0,12,149	1/1:9,14:23:61.86:571,62,0	0/0:18,0:18:30.09:0,30,583	0/0:22,0:22:66.15:0,66,1321	0/0:13,0:13:30:0,30,598	0/0:13,0:12:24.07:0,24,468	0/0:23,0:23:39.11:0,39,688	0/0:12,0:12:21.07:0,21,418	0/0:18,0:18:51.17:0,51,1150	0/0:22,0:22:66.23:0,66,1477	0/0:9,0:9:21.42:0,21,166	0/0:10,0:10:6.93:0,7,233	0/0:7,0:7:20.81:0,21,239	0/0:21,0:21:28.90:0,29,555	0/0:10,0:10:4.67:0,5,192	0/0:13,0:13:39.13:0,39,758	0/0:12,0:12:33.10:0,33,581	0/0:12,0:12:21.05:0,21,419	0/0:14,0:13:33.11:0,33,751	0/1:8,5:13:16.68:177,0,17	1/1:16,18:33:37.37:645,37,0	1/1:4,2:6:6.87:89,7,0
chr10	22932371	.	TA	T	2370.51	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=5.082;DP=448;FS=29.906;HRun=8;HaplotypeScore=89.2287;InbreedingCoeff=0.9407;MQ=76.32;MQ0=5;MQRankSum=-9.642;QD=17.69;ReadPosRankSum=-0.604;VQSLOD=1.9371;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:36.07:0,36,398	1/1:2,1:3:3:29,3,0	0/0:29,1:21:12.65:0,13,204	0/0:27,0:13:11.76:0,12,84	0/0:17,0:17:41.94:0,42,449	0/0:19,0:19:45.07:0,45,488	0/0:13,0:13:8.67:0,9,61	1/1:23,0:23:53.25:428,53,0	0/0:18,0:18:30.06:0,30,325	0/0:25,0:25:68.96:0,69,703	0/0:12,0:12:23.88:0,24,249	0/0:13,0:12:21.02:0,21,216	0/0:22,0:23:30.74:0,31,297	0/0:13,0:13:12.04:0,12,143	0/0:19,0:19:51.13:0,51,587	0/0:23,0:23:60.17:0,60,702	1/1:2,7:9:23.62:227,24,0	1/1:3,7:10:20.96:186,21,0	1/1:4,3:7:12.01:113,12,0	1/1:9,10:19:38.16:322,38,0	1/1:7,2:9:17.93:143,18,0	0/0:12,0:13:32.69:0,33,318	0/0:10,0:10:21.05:0,21,237	0/0:12,0:12:21.04:0,21,229	0/0:14,0:13:30.01:0,30,340	1/1:8,4:13:35.91:301,36,0	1/1:31,4:34:83.78:694,84,0	1/1:6,0:6:17.92:141,18,0
chr10	22932384	.	T	TG	4255.04	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-12.220;DP=439;FS=14.915;HRun=1;HaplotypeScore=89.7190;InbreedingCoeff=0.9493;MQ=80.34;MQ0=5;MQRankSum=5.652;QD=21.28;ReadPosRankSum=2.932;VQSLOD=3.8247;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:38.64:0,39,304	0/0:3,0:3:8.36:0,8,56	0/0:32,0:23:29.93:0,30,286	0/0:28,0:15:7.06:0,7,69	1/1:4,12:17:38.56:310,39,0	1/1:0,15:17:41.81:587,42,0	1/1:1,17:18:20.83:310,21,0	0/0:23,0:23:68.25:0,68,496	1/1:0,17:17:27.09:391,27,0	1/1:24,1:25:8.48:261,8,0	1/1:8,1:10:9.64:71,10,0	1/1:0,13:12:24.08:338,24,0	1/1:2,18:20:25.02:351,25,0	1/1:1,9:10:9.03:133,9,0	0/0:18,0:18:41.65:0,42,352	0/0:18,0:18:50.93:0,51,435	0/0:8,0:8:17.95:0,18,144	0/0:8,0:8:23.92:0,24,187	0/0:7,0:7:18.37:0,18,141	0/0:13,0:13:38.56:0,39,282	0/0:9,0:9:23.76:0,24,173	1/1:1,12:13:38.52:469,39,0	1/1:0,10:11:27.09:389,27,0	1/1:0,12:12:18.06:266,18,0	1/1:4,12:16:27.97:380,28,0	0/0:16,0:16:41.82:0,42,321	0/0:33,0:33:92.40:0,92,681	0/0:8,0:8:23.89:0,24,185
chr10	22932385	.	GTT	G	2134.85	PASS	AB=0.636;AC=19;AF=0.339;AN=56;BaseQRankSum=-0.725;DP=432;FS=3.072;HRun=12;HaplotypeScore=101.0509;InbreedingCoeff=0.8389;MQ=81.44;MQ0=5;MQRankSum=-5.786;QD=16.81;ReadPosRankSum=-0.129;VQSLOD=2.8879;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:14:17.47:0,17,61	1/1:0,3:3:9.02:91,9,0	0/0:29,1:23:27.73:0,28,309	0/0:29,0:16:6.23:0,6,90	0/0:17,0:17:24.02:0,24,245	0/0:16,0:16:42.07:0,42,408	0/0:18,0:18:24.04:0,24,239	1/1:10,12:23:29.72:357,30,0	0/0:16,0:16:27.04:0,27,257	0/0:25,0:25:60.01:0,60,663	0/0:10,0:10:27.07:0,27,307	0/0:13,0:12:24.04:0,24,234	0/0:19,0:19:30.06:0,30,305	0/0:9,0:9:9.01:0,9,86	0/0:3,0:17:33.95:0,34,165	0/0:10,0:17:35.96:0,36,247	1/1:4,2:7:2.68:74,3,0	1/1:5,3:8:8.97:91,9,0	0/1:3,2:7:25.60:69,0,26	1/1:1,12:13:36.06:366,36,0	1/1:5,4:9:11.97:122,12,0	0/0:13,0:13:33.05:0,33,317	0/0:11,0:11:27.05:0,27,264	0/0:12,0:12:18.03:0,18,173	0/0:16,0:15:33.06:0,33,343	1/1:2,13:16:38.78:378,39,0	1/1:12,21:33:59.95:609,60,0	1/1:2,6:8:18.01:183,18,0
chr10	22932656	.	GCTCT	G	517.24	PASS	AB=0.625;AC=6;AF=0.150;AN=40;BaseQRankSum=-0.919;DP=390;FS=21.302;HRun=0;HaplotypeScore=83.0328;InbreedingCoeff=0.3911;MQ=66.41;MQ0=31;MQRankSum=1.507;QD=9.76;ReadPosRankSum=1.728;VQSLOD=1.0575;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:6,0:13:0:0,0,0	./.	./.	0/0:64,0:15:1.41:0,1,3	0/0:13,0:13:9.03:0,9,152	0/0:11,2:15:8.50:0,8,94	0/0:7,0:8:6.49:0,6,125	./.	0/0:8,0:8:7.84:0,8,116	0/0:12,0:10:19.83:0,20,312	./.	0/0:4,0:4:0.89:0,1,2	0/0:7,0:7:12.04:0,12,234	0/0:7,0:6:3.01:0,3,71	0/0:12,0:12:5.41:0,5,103	0/0:3,0:4:3.48:0,3,53	0/0:19,0:19:18.06:0,18,308	./.	0/0:12,0:11:12.04:0,12,222	./.	./.	./.	0/0:6,0:7:5.75:0,6,65	0/0:14,1:15:9.03:0,9,208	0/0:9,0:8:9.03:0,9,184	1/1:6,2:8:3.01:47,3,0	1/1:9,11:20:22.62:334,23,0	0/1:4,7:12:46.95:243,0,47
chr10	22932713	.	G	GTA	2374.05	PASS	AB=0.563;AC=27;AF=0.519;AN=52;BaseQRankSum=-6.728;DP=255;FS=0.000;HRun=0;HaplotypeScore=45.9638;InbreedingCoeff=0.7477;MQ=63.43;MQ0=1;MQRankSum=2.648;QD=22.61;ReadPosRankSum=3.329;VQSLOD=3.5182;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:15.05:0,15,185	0/0:1,0:1:3.01:0,3,37	0/0:14,0:6:5.54:0,6,44	0/0:4,0:2:5.93:0,6,40	1/1:4,5:9:9.03:147,9,0	1/1:7,15:23:33.10:516,33,0	1/1:2,4:6:6.02:98,6,0	0/0:39,0:39:75.19:0,75,865	1/1:0,4:4:9.03:147,9,0	1/1:6,3:8:11.93:163,12,0	1/1:2,10:12:15.05:245,15,0	1/1:1,4:5:9.03:147,9,0	1/1:1,5:6:15.05:245,15,0	1/1:1,3:4:6.02:98,6,0	1/1:1,3:4:6.02:98,6,0	1/1:2,4:6:11.97:165,12,0	0/0:16,0:17:41.92:0,42,477	0/0:6,0:6:18.06:0,18,221	0/0:5,0:6:17.85:0,18,180	0/0:4,0:4:12.02:0,12,126	./.	1/1:0,3:3:6.02:98,6,0	1/1:2,3:5:9.03:134,9,0	./.	0/1:2,7:9:15.85:273,0,16	0/0:11,0:11:27.08:0,27,323	0/0:16,0:16:35.77:0,36,366	0/0:16,0:16:33.05:0,33,376
chr10	22933362	.	TTTTGTTTG	T	5004.57	PASS	AB=0.537;AC=7;AF=0.125;AN=56;BaseQRankSum=12.219;DP=629;FS=13.767;HRun=0;HaplotypeScore=160.1447;InbreedingCoeff=0.8351;MQ=66.16;MQ0=0;MQRankSum=-7.026;QD=51.07;ReadPosRankSum=-1.785;VQSLOD=3.7717;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:39.13:0,39,1579	0/0:11,0:11:33.11:0,33,1355	0/0:20,0:18:41.61:0,42,1215	0/0:22,0:19:33.03:0,33,938	0/0:33,0:33:87.28:0,87,3383	0/0:25,0:25:69.24:0,69,2824	0/0:17,0:17:39.13:0,39,1365	1/1:12,28:40:84.26:1742,84,0	0/0:18,0:18:48.16:0,48,1956	0/0:18,0:18:51.18:0,51,1992	0/0:24,0:24:66.20:0,66,2430	0/0:18,0:18:45.15:0,45,1655	0/0:15,0:15:42.14:0,42,1606	0/0:24,0:24:66.23:0,66,2708	0/0:28,0:28:81.28:0,81,3218	0/0:31,0:31:90.30:0,90,3560	0/0:20,0:20:48.16:0,48,1900	0/0:18,0:18:45.15:0,45,1450	0/0:24,0:24:60.20:0,60,2123	0/0:41,0:41:99:0,108,4260	0/0:15,0:15:36.12:0,36,1489	0/0:22,0:22:60.21:0,60,2472	0/0:31,0:31:90.31:0,90,3471	0/0:16,0:16:45.15:0,45,1480	0/0:24,0:24:66.23:0,66,2799	0/1:3,19:22:99:1333,0,194	1/1:6,21:27:51.17:1366,51,0	1/1:2,7:9:21.07:563,21,0
chr10	22933774	.	GA	G	392.78	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=0.992;DP=549;FS=1.077;HRun=1;HaplotypeScore=74.0813;InbreedingCoeff=0.9663;MQ=71.20;MQ0=0;MQRankSum=-1.097;QD=23.10;ReadPosRankSum=1.118;VQSLOD=3.7169;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,15:17:31.68:487,32,0	0/0:15,0:15:45.13:0,45,665	0/0:12,0:11:27.50:0,27,355	0/0:12,0:12:29.96:0,30,324	0/0:33,0:33:98.79:0,99,925	0/0:22,0:22:63.12:0,63,651	0/0:18,0:18:51.09:0,51,543	0/0:25,0:25:72.20:0,72,1012	0/0:18,0:18:48.05:0,48,456	0/0:27,0:27:77.98:0,78,746	0/0:22,0:22:63.13:0,63,654	0/0:15,0:15:33.04:0,33,318	0/0:18,0:18:42.05:0,42,400	0/0:19,0:19:41.95:0,42,396	0/0:14,0:14:42.13:0,42,639	0/0:22,0:22:63.11:0,63,902	0/0:13,0:13:39.08:0,39,544	0/0:12,0:12:11.85:0,12,368	0/0:26,0:26:73.98:0,74,1053	0/0:32,0:32:96.06:0,96,1365	0/0:12,0:12:29.89:0,30,417	0/0:21,0:21:57.54:0,58,558	0/0:20,0:20:56.99:0,57,597	0/0:13,0:13:36.05:0,36,350	0/0:25,0:25:69.09:0,69,692	0/0:28,0:28:84.25:0,84,1223	0/0:24,0:24:66.18:0,66,950	0/0:14,0:14:42.14:0,42,658
chr10	22933775	.	A	AT	5872.21	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-12.015;DP=555;FS=2.512;HRun=11;HaplotypeScore=57.1729;InbreedingCoeff=0.9746;MQ=71.10;MQ0=0;MQRankSum=1.187;QD=21.28;ReadPosRankSum=1.966;VQSLOD=5.8849;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:9.45:0,9,75	0/0:15,0:15:38.84:0,39,302	0/0:11,0:11:19.91:0,20,141	0/0:12,0:12:14.61:0,15,94	1/1:7,23:32:74.78:718,75,0	1/1:4,20:24:16.44:515,16,0	1/1:4,14:18:18.85:373,19,0	0/0:25,0:25:53.77:0,54,416	1/1:3,15:18:39.08:396,39,0	1/1:3,23:27:68.97:684,69,0	1/1:1,21:22:33.88:525,34,0	1/1:3,13:16:27:262,27,0	1/1:3,16:19:33.07:335,33,0	1/1:1,16:18:39.04:385,39,0	0/0:14,0:14:38.84:0,39,299	0/0:22,0:22:29.91:0,30,371	0/0:13,0:13:29.87:0,30,232	0/0:12,0:12:20.91:0,21,163	0/0:24,0:26:63.75:0,64,470	0/0:32,0:32:83.62:0,84,645	0/0:11,0:13:30.95:0,31,218	1/1:1,20:21:51.57:518,52,0	1/1:4,16:21:7.45:420,7,0	1/1:3,11:14:35.91:338,36,0	1/1:9,17:26:21.91:403,22,0	0/0:27,0:27:65.72:0,66,511	0/0:24,0:25:58.77:0,59,447	0/0:14,0:14:41.75:0,42,318
chr10	22933920	.	C	CA	942.16	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-7.697;DP=549;FS=5.412;HRun=8;HaplotypeScore=51.2013;InbreedingCoeff=0.9756;MQ=68.18;MQ0=0;MQRankSum=0.499;QD=26.92;ReadPosRankSum=0.566;VQSLOD=4.3375;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:42.02:0,42,384	0/0:7,0:7:21.01:0,21,192	0/0:12,0:8:15:0,15,134	0/0:12,0:10:23.39:0,23,177	0/0:29,0:29:75.03:0,75,682	0/0:22,0:22:63.03:0,63,576	0/0:13,0:13:39.02:0,39,357	0/0:31,0:31:63.02:0,63,576	0/0:20,0:20:48.02:0,48,439	0/0:24,1:25:25.41:0,25,487	0/0:22,1:24:30.71:0,31,521	0/0:11,0:11:30.02:0,30,275	0/0:21,0:21:57.03:0,57,522	0/0:15,0:15:39.01:0,39,353	1/1:0,19:19:54.16:623,54,0	1/1:3,13:16:39.10:440,39,0	0/0:15,0:14:36.02:0,36,329	0/0:26,0:25:60.02:0,60,550	0/0:19,0:19:54.01:0,54,487	0/0:30,0:30:77.99:0,78,705	0/0:19,0:19:51.02:0,51,467	0/0:17,1:18:13.41:0,13,377	0/0:30,0:30:84.02:0,84,761	0/0:15,0:15:42.02:0,42,384	0/0:15,0:15:39:0,39,356	0/0:22,0:22:60.02:0,60,549	0/0:32,0:32:87.04:0,87,796	0/0:13,0:13:36.02:0,36,329
chr10	22935732	.	G	GC	177.79	PASS	AB=0.813;AC=5;AF=0.096;AN=52;BaseQRankSum=4.556;DP=260;FS=28.654;HRun=0;HaplotypeScore=23.7946;InbreedingCoeff=-0.1355;MQ=35.51;MQ0=50;MQRankSum=-2.301;QD=4.34;ReadPosRankSum=0.030;VQSLOD=1.3405;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:8:18.06:0,18,249	0/0:3,1:3:6.02:0,6,84	./.	./.	0/0:17,0:12:24.08:0,24,335	0/0:3,0:3:9.03:0,9,125	0/0:7,0:2:6.02:0,6,84	0/0:11,0:5:15.05:0,15,205	0/1:8,1:7:29.50:30,0,191	0/1:8,2:8:71.82:72,0,208	0/0:16,0:12:30.10:0,30,418	0/0:10,0:8:21.03:0,21,270	0/0:11,0:11:33.11:0,33,457	0/1:10,1:11:20.56:21,0,307	0/0:8,2:7:18.06:0,18,250	0/0:2,1:3:6.02:0,6,84	0/0:7,0:5:12.04:0,12,167	0/0:6,0:6:12.04:0,12,166	0/1:1,4:4:29.85:132,0,30	0/0:9,0:8:21.07:0,21,291	0/0:5,0:4:9.03:0,9,126	0/0:10,1:9:24.08:0,24,335	0/0:16,0:12:18.06:0,18,251	0/1:5,1:4:38.76:39,0,75	0/0:19,1:16:30.10:0,30,418	0/0:7,0:6:18.06:0,18,251	0/0:7,0:6:12.04:0,12,166	0/0:4,0:3:9.03:0,9,126
chr10	22936868	.	C	CA	362.70	PASS	AB=0.960;AC=9;AF=0.161;AN=56;BaseQRankSum=2.172;DP=252;FS=18.028;HRun=2;HaplotypeScore=111.7465;InbreedingCoeff=0.0853;MQ=44.05;MQ0=0;MQRankSum=-7.003;QD=5.11;ReadPosRankSum=0.320;VQSLOD=-0.6682;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:25.50:0,26,139	0/0:3,0:3:6.95:0,7,29	0/0:5,0:1:2.84:0,3,14	0/0:13,0:9:5.20:0,5,18	0/0:10,0:10:19.11:0,19,112	0/0:12,0:12:30.88:0,31,163	0/1:7,0:7:9.29:9,0,27	0/1:14,0:14:10.43:85,0,10	0/0:4,0:4:7.69:0,8,40	0/0:12,0:11:26.84:0,27,125	0/0:8,0:8:15.31:0,15,71	0/0:4,0:4:3.92:0,4,28	0/0:16,0:16:28.95:0,29,173	0/0:8,0:8:9.16:0,9,54	0/1:8,5:13:29.08:99,0,29	1/1:3,5:8:23.71:160,24,0	0/0:9,0:9:22.14:0,22,110	0/0:8,0:8:3.67:0,4,71	0/0:11,0:10:25.59:0,26,127	0/0:8,0:8:22.07:0,22,109	0/0:10,0:10:22.23:0,22,113	0/1:6,0:6:5.57:6,0,44	0/0:8,0:8:16.59:0,17,82	0/0:9,0:9:15.34:0,15,82	0/0:12,0:12:29.94:0,30,148	0/1:12,0:12:33.71:47,0,34	0/1:5,0:4:7.67:33,0,8	0/1:6,0:6:7.50:64,0,8
chr10	22936876	.	C	CA	690.30	PASS	AB=1.000;AC=12;AF=0.214;AN=56;BaseQRankSum=1.175;DP=264;FS=25.364;HRun=9;HaplotypeScore=112.2572;InbreedingCoeff=0.6817;MQ=43.16;MQ0=0;MQRankSum=-5.285;QD=10.46;ReadPosRankSum=1.232;VQSLOD=0.9288;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:26.97:0,27,232	0/0:4,0:4:6.84:0,7,74	0/0:3,0:1:3:0,3,26	0/0:9,1:7:16.90:0,17,117	0/0:11,0:11:23.96:0,24,208	0/0:13,0:13:32.97:0,33,281	0/0:8,0:8:5.99:0,6,51	1/1:4,8:12:27.06:290,27,0	0/0:6,0:6:14.98:0,15,129	0/0:12,0:11:29.94:0,30,252	0/0:10,0:10:17.67:0,18,140	0/0:4,0:4:5.86:0,6,52	0/0:17,0:17:41.93:0,42,358	0/0:8,0:8:11.95:0,12,104	0/1:12,0:12:40.41:40,0,42	1/1:6,0:6:13.31:55,13,0	0/0:11,0:11:17.98:0,18,156	0/1:9,0:9:6.69:7,0,134	0/0:11,0:10:29.95:0,30,253	0/0:10,0:10:26.90:0,27,221	0/0:11,0:11:29.99:0,30,259	0/0:6,0:6:11.98:0,12,100	0/0:10,0:10:22.86:0,23,204	0/0:9,0:9:17.98:0,18,156	0/0:12,0:12:29.95:0,30,259	1/1:7,7:14:24:236,24,0	1/1:5,2:6:11.75:101,12,0	1/1:2,4:6:12.03:132,12,0
chr10	22938101	.	AT	A	272.55	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.442;DP=589;FS=0.000;HRun=7;HaplotypeScore=54.0143;InbreedingCoeff=0.9866;MQ=83.30;MQ0=0;MQRankSum=-1.998;QD=15.14;ReadPosRankSum=1.405;VQSLOD=3.1460;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,16:18:36.08:367,36,0	0/0:8,0:8:24.08:0,24,302	0/0:17,1:18:17.53:0,18,520	0/0:15,0:15:27.07:0,27,315	0/0:37,0:37:99:0,108,1347	0/0:31,0:30:84.25:0,84,1032	0/0:10,0:10:30.08:0,30,364	0/0:32,0:32:78.24:0,78,969	0/0:16,0:16:48.15:0,48,593	0/0:21,0:21:63.20:0,63,782	0/0:28,0:28:78.24:0,78,966	0/0:17,0:17:51.16:0,51,642	0/0:22,0:22:66.19:0,66,816	0/0:22,0:22:66.21:0,66,830	0/0:18,0:18:54.17:0,54,679	0/0:23,0:23:66.21:0,66,830	0/0:14,0:14:36.11:0,36,453	0/0:11,0:11:30.10:0,30,375	0/0:18,0:18:51.16:0,51,641	0/0:29,0:29:81.24:0,81,996	0/0:14,0:14:33.11:0,33,415	0/0:22,0:22:66.21:0,66,830	0/0:19,0:19:48.06:0,48,568	0/0:22,0:22:60.19:0,60,755	0/0:26,0:26:72.23:0,72,906	0/0:32,0:32:90.27:0,90,1118	0/0:29,0:28:84.27:0,84,1050	0/0:17,0:17:51.15:0,51,629
chr10	22939204	.	AT	A	7781.49	PASS	AB=0.748;AC=46;AF=0.821;AN=56;BaseQRankSum=5.920;DP=541;FS=12.167;HRun=12;HaplotypeScore=56.4815;InbreedingCoeff=0.7818;MQ=72.22;MQ0=2;MQRankSum=-0.695;QD=16.35;ReadPosRankSum=1.710;VQSLOD=5.2244;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:23:47.99:0,48,458	1/1:1,12:15:39.94:290,40,0	0/0:13,0:12:7.58:0,8,83	0/0:8,0:8:10.83:0,11,93	1/1:4,20:25:22.24:336,22,0	1/1:2,16:18:44.82:348,45,0	1/1:2,9:11:26.89:209,27,0	1/1:3,28:31:83.62:642,84,0	1/1:8,21:30:61.75:470,62,0	1/1:5,22:29:66.79:496,67,0	1/1:1,16:18:43.66:323,44,0	1/1:2,19:21:44.82:348,45,0	1/1:2,17:19:36.20:357,36,0	1/1:2,17:19:41.83:325,42,0	0/1:13,3:16:7.44:7,0,281	0/0:20,0:20:57.06:0,57,558	1/1:5,20:25:47.78:371,48,0	1/1:2,13:16:37.90:285,38,0	1/1:3,15:19:46.83:350,47,0	1/1:3,17:20:50.71:388,51,0	1/1:2,4:6:8.96:70,9,0	1/1:1,10:12:31.90:238,32,0	1/1:2,14:17:34.90:261,35,0	1/1:2,10:13:29.11:216,29,0	1/1:6,12:19:31.89:238,32,0	1/1:7,25:32:74.64:574,75,0	1/1:3,24:27:59.72:459,60,0	0/1:8,9:17:0.65:179,0,1
chr10	22940606	.	A	AT	6256.10	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-15.915;DP=658;FS=5.215;HRun=4;HaplotypeScore=99.2229;InbreedingCoeff=0.9994;MQ=91.69;MQ0=0;MQRankSum=-3.413;QD=35.75;ReadPosRankSum=2.462;VQSLOD=4.6187;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,42:44:99:1559,114,0	1/1:0,14:14:36.12:493,36,0	0/0:30,0:30:75.21:0,75,851	0/0:24,0:24:57.08:0,57,619	0/0:22,0:22:63.16:0,63,705	0/0:29,0:29:84.21:0,84,934	0/0:16,0:16:45.13:0,45,511	0/0:32,0:32:75.18:0,75,831	0/0:23,0:23:69.17:0,69,762	0/0:30,0:30:87.21:0,87,960	0/0:12,0:12:36.09:0,36,399	0/0:22,0:22:66.14:0,66,720	0/0:31,0:31:87.23:0,87,976	0/0:15,0:15:39.10:0,39,435	0/0:22,0:22:63.17:0,63,707	0/0:23,0:23:69.19:0,69,776	1/1:1,26:27:72.24:985,72,0	1/1:1,11:12:30.10:410,30,0	1/1:3,28:31:84.23:1114,84,0	1/1:2,22:24:66.17:875,66,0	1/1:2,21:23:60.20:820,60,0	0/0:18,0:18:48.13:0,48,545	0/0:28,0:28:78.21:0,78,877	0/0:12,0:12:33.09:0,33,374	0/0:17,0:17:48.12:0,48,534	0/0:33,0:33:87.25:0,87,987	0/0:35,0:35:90.24:0,90,1011	0/0:9,0:9:24.07:0,24,272
chr10	22941441	.	A	ATG	2052.04	PASS	AB=0.800;AC=35;AF=0.648;AN=54;BaseQRankSum=-2.162;DP=642;FS=4.889;HRun=0;HaplotypeScore=112.3143;InbreedingCoeff=-0.1488;MQ=57.16;MQ0=12;MQRankSum=-0.867;QD=3.59;ReadPosRankSum=0.100;VQSLOD=2.1551;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:21:0:0,0,0	1/1:3,0:7:5.92:52,6,0	./.	0/1:44,0:16:0:0,0,0	0/1:15,7:23:12.23:80,0,12	0/1:18,13:32:8.96:39,0,9	0/1:17,7:24:23.60:80,0,24	1/1:31,0:31:22.03:114,22,0	0/1:14,5:19:26.95:120,0,27	1/1:27,0:28:13.47:108,13,0	1/1:23,0:23:11.79:87,12,0	0/1:13,7:20:23.60:80,0,24	0/1:19,1:20:28.79:57,0,29	0/1:14,10:25:44.19:201,0,44	0/0:13,0:19:18.36:0,18,85	0/0:9,0:17:5.30:0,5,92	0/1:15,1:26:25.53:92,0,26	0/1:10,0:10:14.43:81,0,14	1/1:18,1:18:13.90:114,14,0	0/1:22,1:35:1.96:22,0,2	1/1:26,0:26:7.14:55,7,0	0/1:6,9:16:31.69:119,0,32	0/1:15,8:23:51.14:118,0,51	1/1:6,10:16:11.88:218,12,0	0/1:20,5:25:74.23:74,0,82	1/1:17,0:18:15.76:89,16,0	1/1:14,0:25:7.05:121,7,0	1/1:5,0:11:11.81:86,12,0
chr10	22942716	.	A	AC	19096.56	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=9.404;DP=639;FS=0.688;HRun=1;HaplotypeScore=132.0473;InbreedingCoeff=0.9946;MQ=56.74;MQ0=1;MQRankSum=2.175;QD=41.42;ReadPosRankSum=6.061;VQSLOD=3.9840;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,21:22:62.88:969,63,0	1/1:1,6:7:12.51:192,13,0	0/0:21,0:19:57:0,57,730	0/0:14,0:12:36.03:0,36,442	1/1:5,23:28:63.21:1006,63,0	1/1:0,30:29:84.29:1341,84,0	1/1:0,16:16:33.11:527,33,0	0/0:31,0:31:87.23:0,87,1153	1/1:0,18:18:51.17:815,51,0	1/1:1,22:23:63.16:983,63,0	1/1:0,32:32:86.81:1389,87,0	1/1:2,17:20:45.15:718,45,0	1/1:1,21:22:63.21:1006,63,0	1/1:0,25:25:69.24:1102,69,0	0/0:24,0:24:60.19:0,60,821	0/0:20,0:20:54.18:0,54,755	1/1:1,39:39:99:1578,99,0	1/1:0,26:26:66.09:1054,66,0	1/1:2,15:16:42.14:666,42,0	1/1:1,29:30:84.29:1342,84,0	1/1:0,9:8:21.07:335,21,0	1/1:1,23:24:63.21:1006,63,0	1/1:0,25:25:72.25:1150,72,0	1/1:1,24:25:60.20:959,60,0	1/1:0,21:21:60.20:958,60,0	0/0:26,1:27:33.28:0,33,1025	0/0:24,0:23:72.24:0,72,1007	0/0:17,0:17:51.17:0,51,713
chr10	22942765	.	CTG	C	1393.50	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-2.288;DP=621;FS=0.665;HRun=0;HaplotypeScore=161.0928;InbreedingCoeff=0.8710;MQ=54.35;MQ0=14;MQRankSum=1.793;QD=36.67;ReadPosRankSum=3.234;VQSLOD=4.7484;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:31:84.20:0,84,1579	0/0:10,0:10:30.10:0,30,579	0/0:5,0:2:5.95:0,6,76	0/0:2,0:1:3.01:0,3,38	0/0:28,0:28:84.27:0,84,1574	0/0:30,0:29:78.23:0,78,1425	0/0:20,0:20:48.16:0,48,926	0/0:30,0:25:75.22:0,75,1410	0/0:18,0:18:45.10:0,45,828	0/0:35,0:35:99:0,102,1878	0/0:27,0:27:75.26:0,75,1448	0/0:21,0:21:47.97:0,48,926	0/0:19,0:19:54.19:0,54,1042	0/0:25,0:25:66.20:0,66,1195	1/1:1,17:18:42.14:643,42,0	1/1:1,19:20:57.19:872,57,0	0/0:36,0:35:96.29:0,96,1804	0/0:23,0:23:57.18:0,57,1067	0/0:26,0:17:48.16:0,48,926	0/0:27,0:27:78.27:0,78,1495	0/0:11,0:11:30.10:0,30,575	0/0:20,0:20:57.17:0,57,1064	0/0:21,0:20:57.17:0,57,1064	0/0:22,0:22:57.17:0,57,1055	0/0:22,0:22:63.20:0,63,1184	0/0:30,0:30:87.29:0,87,1651	0/0:27,0:27:81.28:0,81,1564	0/0:16,0:16:48.16:0,48,920
chr10	22943084	.	TA	T	6313.77	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-5.872;DP=587;FS=4.585;HRun=10;HaplotypeScore=94.7896;InbreedingCoeff=0.9373;MQ=68.62;MQ0=1;MQRankSum=-1.168;QD=15.75;ReadPosRankSum=4.388;VQSLOD=5.2773;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:1,0:24:45.83:0,46,231	1/1:2,0:12:18.33:54,18,0	0/0:15,1:13:1.40:0,1,185	0/0:15,0:15:7.72:0,8,169	1/1:3,30:33:86.82:734,87,0	1/1:4,16:20:44.97:391,45,0	1/1:4,16:20:35.98:312,36,0	0/0:5,0:25:51.42:0,51,268	1/1:3,15:18:8.81:305,9,0	1/1:4,21:25:62.97:543,63,0	1/1:1,26:27:77.94:670,78,0	1/1:2,16:18:47.99:417,48,0	1/1:0,21:21:47.96:417,48,0	1/1:1,12:13:29.99:260,30,0	0/0:6,0:21:51.89:0,52,319	0/0:4,0:20:45.60:0,46,236	1/1:4,0:29:31.28:119,31,0	1/1:1,0:15:26.48:78,26,0	1/1:6,0:14:17.17:59,17,0	1/1:6,0:25:38.69:114,39,0	1/1:2,0:30:44.81:132,45,0	1/1:3,22:25:62.92:536,63,0	1/1:3,16:19:44.99:391,45,0	1/1:2,15:17:41.98:365,42,0	1/1:2,18:20:47.98:417,48,0	0/0:7,0:29:65.89:0,66,355	0/0:2,0:25:51.26:0,51,261	0/0:2,0:10:14.20:0,14,71
chr10	22944162	.	TA	T	12454.53	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=12.548;DP=678;FS=1.755;HRun=7;HaplotypeScore=108.6669;InbreedingCoeff=0.9944;MQ=67.16;MQ0=0;MQRankSum=3.108;QD=27.13;ReadPosRankSum=5.412;VQSLOD=4.2658;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:78.23:0,78,966	1/1:0,7:7:21.05:214,21,0	0/0:19,0:19:45.12:0,45,531	0/0:13,0:13:33.10:0,33,396	1/1:1,37:38:99:1040,102,0	1/1:1,30:31:87.20:888,87,0	1/1:1,13:14:36.08:367,36,0	0/0:27,0:27:78.23:0,78,957	1/1:2,15:17:45.10:459,45,0	1/1:5,44:49:99:1315,129,0	1/1:2,20:22:57.13:581,57,0	1/1:2,25:27:72.16:734,72,0	1/1:3,26:29:75.17:765,75,0	1/1:1,20:21:57.13:582,57,0	0/0:31,0:31:93.28:0,93,1155	0/0:27,0:27:75.24:0,75,944	1/1:1,17:18:45.10:459,45,0	1/1:1,24:25:66.15:673,66,0	1/1:2,17:19:51.11:520,51,0	1/1:1,37:38:99:1133,111,0	1/1:1,18:19:54.12:551,54,0	1/1:2,25:27:60.13:612,60,0	1/1:1,23:24:66.15:674,66,0	1/1:2,5:7:12.02:122,12,0	1/1:0,27:27:75.17:765,75,0	0/0:25,0:25:66.21:0,66,829	0/0:36,0:36:99:0,105,1321	0/0:10,0:10:30.10:0,30,377
chr10	22945140	.	CTTGGTCCTGTGAAAGCTA	C	21912	PASS	AB=0.957;AC=41;AF=0.732;AN=56;BaseQRankSum=14.747;DP=475;FS=5.906;HRun=0;HaplotypeScore=235.3386;InbreedingCoeff=0.8254;MQ=56.47;MQ0=3;MQRankSum=-13.398;QD=70.68;ReadPosRankSum=6.181;VQSLOD=3.8707;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:7,17:24:42.14:1973,42,0	1/1:2,2:4:6.02:312,6,0	0/0:35,0:32:93.29:0,93,5923	0/0:34,0:27:69.24:0,69,4910	1/1:1,10:9:11.95:623,12,0	1/1:2,16:18:42.14:2183,42,0	1/1:6,13:19:24.08:1248,24,0	0/0:30,0:30:90.29:0,90,5606	1/1:9,16:25:39.13:2027,39,0	1/1:8,12:19:33.08:1452,33,0	1/1:2,13:15:36.08:1720,36,0	1/1:1,8:10:18.06:936,18,0	1/1:2,5:8:21.07:1090,21,0	1/1:3,9:12:18.06:874,18,0	0/0:10,0:10:27.09:0,27,2037	0/0:14,0:14:39.13:0,39,3434	1/1:9,14:23:30.10:1472,30,0	1/1:5,11:16:27.09:1326,27,0	1/1:5,6:11:18.03:802,18,0	1/1:5,9:14:18.06:819,18,0	1/1:8,3:11:3.01:156,3,0	1/1:0,4:3:6.02:312,6,0	1/1:0,5:4:12.04:624,12,0	1/1:7,10:17:12.04:624,12,0	1/1:6,15:21:24.08:1248,24,0	0/1:21,1:22:92.74:93,0,4908	0/0:25,0:25:69.24:0,69,5536	0/0:17,0:17:51.18:0,51,4259
chr10	22945421	.	GT	G	9077.61	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=10.247;DP=493;FS=21.287;HRun=1;HaplotypeScore=97.7389;InbreedingCoeff=0.9921;MQ=72.31;MQ0=0;MQRankSum=-0.180;QD=38.46;ReadPosRankSum=1.526;VQSLOD=2.9773;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:48.14:0,48,741	0/0:13,0:13:39.13:0,39,623	0/0:9,0:9:13.43:0,13,370	0/0:6,0:6:11.93:0,12,218	1/1:0,25:25:60.20:839,60,0	1/1:0,21:21:57.19:797,57,0	1/1:0,10:10:30.10:420,30,0	0/0:26,0:26:78.27:0,78,1247	1/1:0,19:19:57.19:797,57,0	1/1:0,20:20:57.17:778,57,0	1/1:0,22:22:60.20:838,60,0	1/1:0,22:22:63.21:881,63,0	1/1:0,16:16:45.15:629,45,0	1/1:0,20:20:57.19:797,57,0	0/0:14,0:14:42.12:0,42,625	0/0:8,0:8:24.08:0,24,384	0/0:21,0:21:60.20:0,60,959	0/0:15,0:15:42.14:0,42,671	0/0:17,0:17:51.16:0,51,794	0/0:28,0:28:84.27:0,84,1313	0/0:13,0:13:39.13:0,39,624	1/1:0,12:12:36.12:504,36,0	1/1:0,16:16:36.12:499,36,0	1/1:0,11:11:30.10:420,30,0	1/1:0,22:22:63.21:880,63,0	0/0:17,0:17:51.17:0,51,816	0/0:28,0:28:81.28:0,81,1295	0/0:25,0:25:66.22:0,66,1042
chr10	22946099	.	TTGTGTAAC	T	20535.80	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=17.311;DP=592;FS=2.480;HRun=0;HaplotypeScore=195.5706;InbreedingCoeff=0.9891;MQ=82.17;MQ0=0;MQRankSum=-17.658;QD=53.34;ReadPosRankSum=5.071;VQSLOD=4.6702;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,18:19:39.13:1057,39,0	1/1:2,10:12:27.09:732,27,0	0/0:22,0:22:60.17:0,60,2247	0/0:25,0:25:66.23:0,66,2587	1/1:5,21:26:33.11:894,33,0	1/1:1,17:18:45.15:1220,45,0	1/1:2,12:14:30.10:780,30,0	0/0:35,0:35:90.31:0,90,3641	1/1:6,24:30:66.23:1789,66,0	1/1:6,20:26:66.23:1788,66,0	1/1:1,9:10:18.06:488,18,0	1/1:3,15:18:39.13:1057,39,0	1/1:2,15:17:42.14:1139,42,0	1/1:2,27:29:78.27:2114,78,0	0/0:36,0:36:99:0,105,4256	0/0:24,0:23:69.24:0,69,2745	1/1:5,12:17:24.08:651,24,0	1/1:1,6:7:18.06:488,18,0	1/1:10,9:19:27.09:652,27,0	1/1:11,20:31:54.19:1464,54,0	1/1:6,13:19:18.06:487,18,0	1/1:10,21:31:66.23:1788,66,0	1/1:0,8:8:21.07:569,21,0	1/1:3,13:16:11.89:323,12,0	1/1:2,16:18:39.13:1057,39,0	0/0:23,0:23:60.21:0,60,2374	0/0:30,0:29:84.29:0,84,3473	0/0:12,0:12:36.12:0,36,1367
chr10	22946787	.	GA	G	3911.13	PASS	AB=0.594;AC=39;AF=0.696;AN=56;BaseQRankSum=-3.038;DP=559;FS=2.524;HRun=12;HaplotypeScore=86.4751;InbreedingCoeff=0.8025;MQ=74.61;MQ0=2;MQRankSum=-0.202;QD=9.83;ReadPosRankSum=6.662;VQSLOD=3.0386;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,1:46:66.12:205,66,0	1/1:3,1:11:13.16:53,13,0	0/0:23,0:16:26.36:0,26,214	0/0:13,0:10:3.13:0,3,32	0/1:6,13:19:3.72:159,0,4	1/1:2,16:20:15.47:283,15,0	1/1:3,13:17:7.46:231,7,0	0/0:11,0:26:43.03:0,43,242	1/1:3,13:17:34.91:261,35,0	1/1:4,12:16:5.52:225,6,0	1/1:4,9:13:2.42:200,2,0	1/1:5,16:22:32.55:317,33,0	1/1:4,13:19:15.47:283,15,0	1/1:4,10:15:4.22:167,4,0	0/0:12,0:23:31.56:0,32,174	0/0:8,0:19:28.79:0,29,160	1/1:4,0:30:46.84:135,47,0	1/1:3,0:16:26.48:76,26,0	1/1:8,1:25:26.13:94,26,0	1/1:3,1:20:13.74:75,14,0	1/1:2,0:20:30.55:88,31,0	1/1:6,12:18:35.83:278,36,0	1/1:3,14:17:32.40:254,32,0	1/1:4,14:18:9.35:249,9,0	1/1:4,15:19:16.61:276,17,0	0/0:7,0:28:15.27:0,15,312	0/0:13,1:23:29.08:0,29,328	0/0:1,0:6:14.34:0,14,78
chr10	22947066	.	G	GT	13891.71	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-14.652;DP=678;FS=3.126;HRun=7;HaplotypeScore=58.8693;InbreedingCoeff=0.9648;MQ=79.53;MQ0=0;MQRankSum=-4.082;QD=31.22;ReadPosRankSum=2.940;VQSLOD=5.0750;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:84.10:0,84,803	1/1:2,7:9:21.06:253,21,0	0/0:32,0:30:70.92:0,71,670	0/0:18,0:18:33.41:0,33,343	1/1:0,20:20:60.18:724,60,0	1/1:0,20:20:51.16:616,51,0	1/1:2,19:21:51.16:616,51,0	0/0:26,0:26:60.09:0,60,579	1/1:0,28:28:72.22:870,72,0	1/1:4,25:29:75.22:895,75,0	1/1:2,23:25:69.16:808,69,0	1/1:0,17:17:51.16:616,51,0	1/1:0,27:27:75.23:906,75,0	1/1:1,27:28:75.23:906,75,0	0/0:34,0:34:96.10:0,96,908	0/0:16,0:16:48.08:0,48,463	1/1:3,21:24:60.18:725,60,0	1/1:3,14:17:39.12:471,39,0	1/1:2,10:12:30.09:362,30,0	1/1:2,23:25:66.16:781,66,0	1/1:5,24:31:74.91:846,75,0	1/1:1,14:15:39.12:471,39,0	1/1:3,28:31:81.20:961,81,0	1/1:5,40:45:99:1377,114,0	1/1:1,20:21:57.17:689,57,0	0/0:26,2:28:5.62:0,6,616	0/0:46,0:45:99:0,138,1325	0/0:2,0:2:6.01:0,6,58
chr10	22948646	.	G	GCACACACA	7817.28	PASS	AB=0.846;AC=41;AF=0.732;AN=56;BaseQRankSum=-3.122;DP=589;FS=53.997;HRun=0;HaplotypeScore=155.9466;InbreedingCoeff=0.6946;MQ=60.38;MQ0=8;MQRankSum=-5.324;QD=18.66;ReadPosRankSum=-4.401;VQSLOD=0.7313;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,0:36:5.42:74,5,0	0/0:6,0:7:12.04:0,12,283	1/1:35,0:15:0.89:2,1,0	0/0:39,0:20:3.01:0,3,32	0/1:17,3:22:42.82:294,0,43	1/1:11,2:18:6.02:188,6,0	1/1:17,3:20:6.02:247,6,0	1/1:33,0:32:38.32:943,38,0	1/1:14,7:23:21.06:765,21,0	1/1:13,1:14:21.03:398,21,0	1/1:12,0:12:6.02:136,6,0	1/1:19,4:22:24.06:707,24,0	1/1:9,4:15:12.04:425,12,0	1/1:13,3:16:15.05:489,15,0	1/1:24,0:27:24.05:561,24,0	1/1:12,2:15:6.02:228,6,0	0/0:25,0:26:53.98:0,54,1288	0/0:8,0:10:12.04:0,12,263	0/0:15,0:16:30.09:0,30,610	0/0:26,0:25:42.06:0,42,873	0/0:43,0:45:72.24:0,72,1589	1/1:8,4:12:15.05:587,15,0	1/1:15,2:23:8.74:311,9,0	1/1:14,1:15:6.01:72,6,0	1/1:12,0:11:6.01:69,6,0	1/1:17,0:17:11.99:309,12,0	1/1:19,2:21:19.88:756,20,0	1/1:6,0:7:9.03:259,9,0
chr10	22950249	.	T	TTA	7128.83	PASS	AC=36;AF=0.667;AN=54;BaseQRankSum=4.297;DP=504;FS=5.247;HRun=0;HaplotypeScore=80.3096;InbreedingCoeff=0.9028;MQ=77.10;MQ0=12;MQRankSum=-0.172;QD=27.96;ReadPosRankSum=2.467;VQSLOD=6.2215;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:45.14:0,45,618	1/1:4,0:4:9.50:145,10,0	0/0:38,0:21:27.59:0,28,701	0/0:62,0:24:59.21:0,59,810	1/1:13,0:13:24.08:374,24,0	1/1:11,0:11:11.11:276,11,0	1/1:17,0:17:3.01:43,3,0	0/0:36,0:32:78.05:0,78,1081	1/1:9,0:9:24.08:378,24,0	1/1:17,0:17:41.83:702,42,0	1/1:23,0:23:51.16:777,51,0	1/1:10,0:10:27.07:411,27,0	1/1:13,0:13:38.47:522,38,0	1/1:10,0:10:24.08:378,24,0	0/0:14,0:14:36.11:0,36,495	0/0:15,0:14:39.13:0,39,539	1/1:2,13:15:3.01:36,3,0	1/1:14,0:12:33.11:484,33,0	1/1:22,0:21:38.39:577,38,0	1/1:19,0:19:54.18:845,54,0	./.	1/1:12,0:11:21.07:320,21,0	1/1:15,0:15:30.10:453,30,0	1/1:14,0:14:24.08:364,24,0	1/1:17,0:17:3.01:43,3,0	0/0:15,0:13:33.11:0,33,479	0/0:21,0:21:54.15:0,54,706	0/0:13,0:13:36.12:0,36,503
chr10	22950251	.	A	ATACT	7226.03	PASS	AB=1.000;AC=37;AF=0.661;AN=56;BaseQRankSum=4.466;DP=566;FS=6.820;HRun=0;HaplotypeScore=127.9905;InbreedingCoeff=0.8852;MQ=72.06;MQ0=22;MQRankSum=-1.178;QD=22.30;ReadPosRankSum=1.972;VQSLOD=3.8831;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:45.12:0,45,598	1/1:6,0:6:11.53:154,12,0	0/0:38,0:21:27.22:0,27,701	0/0:61,0:23:61.42:0,61,815	1/1:18,0:18:24.07:374,24,0	1/1:20,0:18:20.87:300,21,0	1/1:2,17:19:3.01:71,3,0	0/0:35,0:31:78.40:0,78,1080	1/1:17,0:13:24.05:379,24,0	1/1:21,0:21:46.30:718,46,0	1/1:27,0:27:51.15:777,51,0	1/1:18,0:18:26.93:411,27,0	1/1:18,0:17:43.30:580,43,0	1/1:12,0:11:24.07:378,24,0	0/0:16,0:16:36.05:0,36,488	0/0:15,0:14:39.13:0,39,538	1/1:13,0:13:3.01:36,3,0	1/1:12,0:10:30.10:445,30,0	1/1:19,0:18:35.39:552,35,0	1/1:19,0:19:54.18:845,54,0	0/1:13,0:12:0:0,0,0	1/1:16,0:13:21.07:320,21,0	1/1:19,0:18:30.10:453,30,0	1/1:16,0:16:24.08:364,24,0	1/1:4,17:21:2.99:70,3,0	0/0:18,0:16:32.72:0,33,474	0/0:20,0:20:50:0,50,684	0/0:16,0:15:14.16:0,14,459
chr10	22950280	.	C	CCT	77.84	PASS	AB=0.967;AC=6;AF=0.107;AN=56;BaseQRankSum=0.003;DP=437;FS=10.408;HRun=0;HaplotypeScore=94.1790;InbreedingCoeff=0.1055;MQ=43.07;MQ0=52;MQRankSum=1.825;QD=0.91;ReadPosRankSum=1.257;VQSLOD=1.1035;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:18:26.55:0,27,384	0/0:10,0:10:11.52:0,12,174	0/0:6,0:2:3.01:0,3,38	0/0:21,0:7:13.69:0,14,202	0/1:22,0:21:10.39:10,0,81	0/1:18,2:16:24.86:43,0,25	0/0:12,0:12:2.82:0,3,20	0/0:31,0:20:50.99:0,51,582	0/0:16,0:11:9.64:0,10,127	0/1:22,1:22:52.36:52,0,694	0/0:25,0:24:21.45:0,21,238	0/0:15,0:14:15.99:0,16,225	0/0:14,0:12:14.37:0,14,161	0/1:9,0:7:20.77:21,0,151	0/0:11,0:10:18.02:0,18,210	0/0:12,0:11:30.08:0,30,425	0/0:17,0:14:9.50:0,10,129	0/0:13,0:10:23.94:0,24,318	0/0:17,0:12:28.63:0,29,361	0/0:6,0:5:3.43:0,3,47	0/0:12,0:11:6.02:0,6,89	1/1:11,1:8:8.78:72,9,0	0/0:20,0:19:13.18:0,13,113	0/0:12,1:13:9.03:0,9,139	0/0:12,2:12:6.54:0,7,47	0/0:17,0:13:30.56:0,31,401	0/0:18,0:17:48.14:0,48,624	0/0:11,0:7:13.59:0,14,165
chr10	22950291	.	TCTCC	T	2713.17	PASS	AB=1.000;AC=44;AF=0.786;AN=56;BaseQRankSum=-2.182;DP=383;FS=15.869;HRun=0;HaplotypeScore=82.8497;InbreedingCoeff=0.2160;MQ=45.02;MQ0=48;MQRankSum=7.264;QD=7.93;ReadPosRankSum=0.336;VQSLOD=1.2039;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:16:23.94:194,24,0	1/1:9,0:9:17.69:131,18,0	0/0:6,0:2:2.97:0,3,20	0/0:10,0:5:0.61:0,1,8	0/0:25,0:24:2.99:0,3,24	0/1:19,0:14:13.28:100,0,13	1/1:9,0:9:11.75:94,12,0	0/1:35,0:25:50.30:187,0,50	1/1:14,0:11:7.22:48,7,0	0/1:17,0:16:56.15:56,0,133	0/1:17,0:16:0.12:0,0,0	0/1:13,0:12:0.19:21,0,0	1/1:13,0:12:13.18:111,13,0	1/1:9,0:7:14.17:99,14,0	1/1:7,0:6:14.98:125,15,0	1/1:9,0:8:17.99:154,18,0	1/1:14,0:11:12.36:87,12,0	1/1:13,0:10:23.48:175,23,0	1/1:14,0:8:14.22:112,14,0	1/1:8,0:7:9.17:70,9,0	1/1:13,0:12:14.95:120,15,0	1/1:10,0:9:17.93:143,18,0	1/1:14,0:13:14.80:122,15,0	1/1:9,0:9:2.98:21,3,0	1/1:13,0:11:10.21:88,10,0	1/1:5,10:11:2.11:183,2,0	1/1:21,0:20:44.70:364,45,0	0/1:8,0:4:5.87:40,0,6
chr10	22950293	.	TCC	T	2793.25	PASS	AB=0.902;AC=45;AF=0.804;AN=56;BaseQRankSum=-2.211;DP=370;FS=13.693;HRun=3;HaplotypeScore=73.9590;InbreedingCoeff=0.2438;MQ=44.96;MQ0=48;MQRankSum=6.830;QD=8.54;ReadPosRankSum=1.539;VQSLOD=-0.6399;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:13:23.94:194,24,0	1/1:9,0:9:17.27:133,17,0	0/0:8,0:2:2.97:0,3,20	0/0:11,0:6:0.34:0,0,8	0/0:11,13:23:2.45:0,2,10	1/1:18,0:14:6.99:110,7,0	1/1:6,0:6:11.91:94,12,0	0/1:35,0:25:58.46:185,0,58	1/1:14,0:11:5.52:47,6,0	0/1:13,3:15:72.53:73,0,90	0/1:8,8:15:0.05:0,0,0	0/1:11,0:10:0.92:20,0,1	1/1:14,0:12:19.66:131,20,0	1/1:9,0:7:17.16:123,17,0	1/1:8,0:7:17.97:149,18,0	1/1:9,0:8:20.98:177,21,0	1/1:13,0:10:12.36:88,12,0	1/1:13,0:10:23.48:175,23,0	1/1:8,6:8:14.22:112,14,0	1/1:6,2:7:9.16:71,9,0	1/1:13,0:12:14.94:120,15,0	1/1:10,0:9:17.93:144,18,0	1/1:12,0:11:14.96:122,15,0	1/1:7,0:7:2.98:21,3,0	1/1:12,0:10:10.17:88,10,0	1/1:15,0:11:0.40:140,0,0	1/1:20,1:20:47.69:366,48,0	0/1:8,0:4:7.29:40,0,7
chr10	22950295	.	CCTCTCTCTCT	C	1048.25	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=1.875;DP=363;FS=2.423;HRun=0;HaplotypeScore=108.3743;InbreedingCoeff=0.2660;MQ=45.29;MQ0=46;MQRankSum=2.143;QD=6.31;ReadPosRankSum=-1.759;VQSLOD=1.6112;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:12:1.55:4,2,0	0/0:9,0:9:3.26:0,3,10	0/0:8,0:2:3.01:0,3,48	0/0:11,0:6:9.41:0,9,68	0/0:23,0:22:5.06:0,5,145	0/0:15,0:12:3.94:0,4,126	0/1:6,0:6:0.05:0,0,0	1/1:17,16:24:48.08:615,48,0	0/0:14,0:11:2.43:0,2,8	0/0:14,0:13:16.30:0,16,438	0/0:16,0:15:2.99:0,3,25	1/1:10,0:9:0.18:3,0,0	0/0:14,0:12:8.24:0,8,77	1/1:9,0:7:3.83:12,4,0	0/0:8,0:7:3.31:0,3,26	0/0:10,0:9:1.64:0,2,18	0/0:13,0:10:0.72:0,1,3	0/0:13,0:10:1.61:0,2,5	1/1:14,0:7:1.77:4,2,0	0/0:8,0:7:2.51:0,3,7	1/1:13,0:12:0.47:2,0,0	0/1:10,0:9:9.57:10,0,31	0/1:12,0:11:0.06:2,0,0	0/0:8,0:8:0.89:0,1,2	0/0:13,0:11:5.40:0,5,77	0/1:15,0:11:20.29:20,0,160	0/1:19,0:18:33.38:383,0,33	1/1:10,0:6:9.02:124,9,0
chr10	22950794	.	T	TGAAG	43325.18	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-6.751;DP=774;FS=0.619;HRun=0;HaplotypeScore=114.6380;InbreedingCoeff=0.9977;MQ=76.95;MQ0=0;MQRankSum=-10.010;QD=59.92;ReadPosRankSum=6.166;VQSLOD=6.5665;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,25:27:66.23:1723,66,0	1/1:0,14:14:33.11:863,33,0	0/0:25,0:25:55.06:0,55,952	0/0:26,0:26:54.15:0,54,1031	1/1:5,26:31:72.20:1737,72,0	1/1:2,34:36:90.31:2357,90,0	1/1:4,26:30:72.25:1883,72,0	1/1:14,11:25:36.11:863,36,0	1/1:5,27:32:69.24:1806,69,0	1/1:7,31:38:99:2455,99,0	1/1:0,15:15:42.10:1039,42,0	1/1:6,30:36:90.31:2277,90,0	1/1:6,40:48:99:2827,111,0	1/1:7,36:45:99:2882,114,0	1/1:3,20:23:54.19:1413,54,0	1/1:4,30:34:87.30:2239,87,0	1/1:4,15:19:48.16:1253,48,0	1/1:0,15:15:42.14:1100,42,0	1/1:5,11:18:42.10:988,42,0	1/1:5,19:24:45.15:1178,45,0	1/1:3,25:30:60.16:1450,60,0	1/1:6,21:28:60.21:1570,60,0	1/1:1,23:24:66.18:1669,66,0	1/1:5,21:27:57.17:1452,57,0	1/1:3,27:30:78.22:1984,78,0	1/1:6,22:30:72.21:1689,72,0	1/1:3,31:34:81.28:2120,81,0	1/1:2,6:8:21.07:507,21,0
chr10	22951566	.	G	GGA	623.71	PASS	AB=1.000;AC=17;AF=0.327;AN=52;BaseQRankSum=0.603;DP=221;FS=12.103;HRun=0;HaplotypeScore=62.6846;InbreedingCoeff=0.4049;MQ=63.21;MQ0=11;MQRankSum=-2.681;QD=5.20;ReadPosRankSum=-0.597;VQSLOD=1.1551;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,0:4:6.21:38,6,0	1/1:0,1:1:3.01:51,3,0	0/0:14,0:4:11.12:0,11,83	0/1:41,0:16:9.80:10,0,76	0/0:7,0:7:6.02:0,6,70	0/0:2,0:2:6.02:0,6,77	0/0:7,0:7:12.35:0,12,177	0/0:4,0:4:10.27:0,10,114	0/0:8,0:8:24.07:0,24,277	0/1:10,0:10:9.95:10,0,224	0/1:10,0:10:23.71:24,0,121	0/0:7,0:7:18.05:0,18,214	0/0:6,0:6:12.04:0,12,144	0/0:13,0:13:24.02:0,24,269	0/0:5,0:5:12.04:0,12,145	0/0:4,0:4:12.02:0,12,119	1/1:0,5:5:12.04:201,12,0	1/1:2,3:5:10.28:156,10,0	./.	1/1:1,5:7:7.27:83,7,0	1/1:1,12:15:12.51:204,13,0	0/1:13,0:13:3.26:3,0,175	0/1:9,0:9:8.95:9,0,85	0/0:9,0:9:11.97:0,12,112	0/0:12,0:12:15.96:0,16,206	0/0:2,0:2:3.01:0,3,39	0/0:1,0:1:3.01:0,3,35	./.
chr10	22951984	.	GA	G	908.75	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.763;DP=596;FS=0.722;HRun=3;HaplotypeScore=55.8155;InbreedingCoeff=0.9917;MQ=76.91;MQ0=0;MQRankSum=-3.844;QD=29.31;ReadPosRankSum=3.092;VQSLOD=3.0023;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,30:31:81.25:1004,81,0	0/0:12,0:12:36.12:0,36,517	0/0:14,0:14:39.13:0,39,562	0/0:15,0:15:42.14:0,42,583	0/0:27,0:27:81.26:0,81,1148	0/0:29,0:29:87.29:0,87,1253	0/0:16,0:16:48.15:0,48,674	0/0:38,0:38:99:0,111,1569	0/0:17,0:17:48.16:0,48,690	0/0:33,0:33:96.32:0,96,1382	0/0:19,0:19:57.19:0,57,820	0/0:22,0:22:66.21:0,66,931	0/0:16,0:16:48.15:0,48,673	0/0:21,0:21:63.21:0,63,906	0/0:23,0:23:69.23:0,69,993	0/0:23,0:23:66.20:0,66,930	0/0:21,0:21:63.21:0,63,906	0/0:21,0:21:63.21:0,63,907	0/0:21,0:21:63.20:0,63,891	0/0:22,0:22:66.22:0,66,950	0/0:6,0:6:18.05:0,18,241	0/0:17,0:17:51.17:0,51,734	0/0:26,0:26:72.22:0,72,1002	0/0:18,0:18:54.18:0,54,777	0/0:15,0:14:45.15:0,45,648	0/0:24,0:24:72.23:0,72,1019	0/0:37,0:36:94.69:0,95,1486	0/0:12,0:12:36.12:0,36,518
chr10	22952918	.	GA	G	5231.88	PASS	AB=1.000;AC=39;AF=0.696;AN=56;BaseQRankSum=-8.911;DP=251;FS=2.988;HRun=1;HaplotypeScore=30.9639;InbreedingCoeff=0.7656;MQ=54.22;MQ0=10;MQRankSum=-0.806;QD=32.50;ReadPosRankSum=0.921;VQSLOD=4.3819;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:8.77:0,9,121	1/1:0,5:5:9.03:126,9,0	0/0:12,2:3:6.02:0,6,83	0/0:10,1:4:3:0,3,47	1/1:1,14:15:30.10:416,30,0	1/1:1,4:4:12.04:168,12,0	1/1:1,8:6:15.05:209,15,0	0/1:8,0:4:8.52:9,0,30	1/1:0,7:7:21.07:292,21,0	1/1:0,9:9:27.09:377,27,0	1/1:0,16:16:42.14:583,42,0	1/1:0,7:7:21.07:291,21,0	1/1:0,8:8:21.07:293,21,0	1/1:1,5:5:12.04:167,12,0	0/0:2,0:2:2.74:0,3,12	0/0:10,0:8:16.81:0,17,87	1/1:0,10:10:27.09:377,27,0	1/1:0,6:6:18.06:252,18,0	1/1:0,1:1:3.01:42,3,0	1/1:0,7:7:21.07:293,21,0	1/1:0,11:10:24.08:335,24,0	1/1:0,7:7:15.05:209,15,0	1/1:0,11:11:27.09:375,27,0	1/1:0,4:3:9.03:125,9,0	1/1:0,9:9:21.07:294,21,0	0/0:10,0:10:27.57:0,28,129	0/0:24,0:22:26.02:0,26,230	0/0:4,0:4:11.34:0,11,59
chr10	22953015	.	C	CGTAGGTAGGTAGGTAG	7141.82	PASS	AB=1.000;AC=40;AF=0.800;AN=50;BaseQRankSum=-5.436;DP=320;FS=3.496;HRun=0;HaplotypeScore=127.8991;InbreedingCoeff=0.5773;MQ=50.17;MQ0=5;MQRankSum=-4.835;QD=29.03;ReadPosRankSum=1.775;VQSLOD=3.8810;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:19:27.09:0,27,967	1/1:1,0:1:3.01:128,3,0	0/0:11,0:7:12.04:0,12,258	0/0:16,0:7:6.02:0,6,150	1/1:3,0:3:6.02:184,6,0	0/1:8,0:7:0:0,0,0	1/1:9,0:8:3.01:69,3,0	1/1:16,0:16:3.72:73,4,0	1/1:21,0:21:33.11:849,33,0	1/1:4,0:4:9.03:311,9,0	1/1:3,0:3:6.02:156,6,0	1/1:16,0:14:27.09:660,27,0	1/1:15,0:15:24.06:577,24,0	1/1:15,0:14:18.06:467,18,0	1/1:13,0:13:9.03:298,9,0	1/1:13,0:12:24.08:833,24,0	1/1:10,0:10:9.03:238,9,0	1/1:14,0:14:18.05:467,18,0	1/1:8,4:12:24.08:823,24,0	1/1:9,0:9:12.04:375,12,0	1/1:15,0:15:3.48:48,3,0	./.	./.	1/1:11,0:10:6.02:159,6,0	1/1:8,0:8:15.05:414,15,0	0/0:13,0:13:18.93:0,19,195	0/1:29,0:27:12.26:12,0,18	./.
chr10	22953016	.	G	GTAGC	1639.59	PASS	AB=1.000;AC=15;AF=0.288;AN=52;BaseQRankSum=4.903;DP=331;FS=0.674;HRun=0;HaplotypeScore=88.9729;InbreedingCoeff=0.3026;MQ=49.40;MQ0=7;MQRankSum=-1.580;QD=11.71;ReadPosRankSum=2.751;VQSLOD=3.0386;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:44.87:0,45,618	./.	0/0:12,0:7:21.04:0,21,303	0/0:17,0:7:17.90:0,18,192	0/0:3,0:3:3.37:0,3,17	0/0:8,0:7:8.97:0,9,74	0/0:10,0:8:15.28:0,15,103	1/1:2,15:18:47.97:647,48,0	0/0:21,0:21:7.69:0,8,193	0/0:4,0:4:1.92:0,2,26	1/1:3,0:3:1.82:5,2,0	0/0:16,0:14:1.54:0,2,101	0/0:15,0:15:9.82:0,10,110	0/0:15,0:14:12.65:0,13,149	0/0:13,0:13:19.68:0,20,140	0/1:13,0:12:27.90:28,0,92	0/1:10,0:10:14.15:14,0,114	0/1:14,0:14:10.25:10,0,135	0/1:13,0:12:32.72:33,0,100	0/1:9,0:9:3.18:3,0,37	0/0:16,0:16:5.54:0,6,170	0/0:1,0:1:2.92:0,3,17	./.	0/0:11,0:10:8.29:0,8,62	0/0:8,0:8:6.41:0,6,53	1/1:14,0:14:42.09:810,42,0	1/1:4,25:28:11.82:209,12,0	1/1:16,0:14:3.01:36,3,0
chr10	22953049	.	AAGATAGATAGAT	A	872.93	PASS	AB=0.909;AC=18;AF=0.391;AN=46;BaseQRankSum=0.700;DP=307;FS=3.983;HRun=0;HaplotypeScore=119.3736;InbreedingCoeff=0.3046;MQ=39.02;MQ0=28;MQRankSum=0.840;QD=6.47;ReadPosRankSum=-0.612;VQSLOD=2.0928;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:19,0:21:13.17:15,0,13	0/0:2,0:2:3.01:0,3,87	./.	./.	0/0:3,0:4:2.92:0,3,17	0/1:7,0:6:7.85:96,0,8	0/0:9,0:7:4.26:0,4,41	./.	1/1:13,12:25:6.02:192,6,0	1/1:3,0:4:1.55:4,2,0	./.	1/1:14,1:13:9.03:206,9,0	1/1:12,0:12:9.03:304,9,0	1/1:9,0:8:6.02:136,6,0	0/0:4,0:4:3.01:0,3,130	0/0:11,0:10:6.02:0,6,137	0/0:15,0:15:21.54:0,22,816	0/0:12,0:11:12.04:0,12,415	0/0:14,0:12:15.02:0,15,410	0/0:6,0:6:0:0,0,0	./.	0/0:1,0:1:3.01:0,3,37	1/1:1,0:3:1.55:4,2,0	0/0:9,0:8:0:0,0,0	1/1:8,0:8:2.68:11,3,0	0/1:8,0:13:36.05:36,0,91	0/1:18,0:17:2.27:2,0,15	0/0:15,0:15:6.02:0,6,108
chr10	22953257	.	AATAT	A	876.06	PASS	AB=1.000;AC=15;AF=0.278;AN=54;BaseQRankSum=-2.131;DP=212;FS=1.742;HRun=0;HaplotypeScore=64.3978;InbreedingCoeff=0.6016;MQ=66.04;MQ0=4;MQRankSum=-0.823;QD=15.37;ReadPosRankSum=-0.025;VQSLOD=2.9017;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:17.98:0,18,254	1/1:1,1:2:6.02:105,6,0	0/1:8,0:6:6.89:7,0,35	0/0:10,0:4:5.98:0,6,47	0/0:9,0:9:16.38:0,16,131	0/0:10,0:10:25.97:0,26,375	0/0:2,0:2:3.01:0,3,47	0/0:39,0:39:81.19:0,81,1520	0/0:2,0:2:6.02:0,6,117	0/0:2,0:2:3.01:0,3,43	0/0:10,0:10:14.72:0,15,139	0/0:1,0:1:3.01:0,3,58	0/0:4,0:4:12.04:0,12,202	0/0:3,0:3:8.92:0,9,119	0/1:4,0:4:0.99:9,0,1	./.	1/1:6,1:7:14.94:166,15,0	1/1:7,2:9:12.10:225,12,0	1/1:7,1:7:8.94:101,9,0	1/1:11,0:11:26.92:365,27,0	1/1:1,6:7:5.93:62,6,0	0/0:1,0:1:2.90:0,3,16	0/1:1,0:1:0:0,0,0	0/0:2,0:2:5.59:0,6,34	0/0:9,0:9:26.98:0,27,340	0/0:6,0:6:9.03:0,9,171	0/0:15,0:15:32.99:0,33,636	0/0:19,0:19:14.97:0,15,285
chr10	22953267	.	TATA	T	198.90	PASS	AB=0.974;AC=9;AF=0.167;AN=54;BaseQRankSum=2.902;DP=226;FS=0.000;HRun=0;HaplotypeScore=66.9539;InbreedingCoeff=0.0349;MQ=61.63;MQ0=3;MQRankSum=-1.078;QD=3.01;ReadPosRankSum=-0.879;VQSLOD=1.0926;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:17.06:0,17,249	0/1:6,0:6:10.77:27,0,11	0/0:7,0:5:8.69:0,9,100	0/1:13,0:6:19.29:19,0,70	0/0:8,0:8:20.62:0,21,205	0/0:12,0:12:29.74:0,30,415	0/0:3,0:3:6.02:0,6,82	0/0:32,0:32:93.21:0,93,1876	0/0:3,0:3:9.03:0,9,154	0/0:4,0:4:12.04:0,12,159	0/0:12,0:12:14.87:0,15,162	0/0:1,0:1:3.01:0,3,51	0/0:6,0:6:18.06:0,18,281	0/0:6,0:6:9.02:0,9,133	0/1:5,0:5:5.29:5,0,49	./.	0/1:8,0:8:8.49:59,0,8	0/1:7,2:9:23.40:77,0,23	0/1:6,0:6:7.48:7,0,29	1/1:7,3:10:11.69:111,12,0	0/1:9,0:9:27.63:28,0,41	0/0:3,0:3:9.02:0,9,99	0/0:4,0:4:6:0,6,59	0/0:2,0:2:5.57:0,6,32	0/0:12,0:12:29.23:0,29,392	0/0:5,0:5:12.04:0,12,238	0/0:13,0:13:32.37:0,32,694	0/0:17,0:17:15.05:0,15,296
chr10	22953273	.	TAGAGAG	T	561.26	PASS	AB=0.893;AC=11;AF=0.204;AN=54;BaseQRankSum=-0.454;DP=239;FS=19.513;HRun=0;HaplotypeScore=74.0774;InbreedingCoeff=0.3550;MQ=62.51;MQ0=4;MQRankSum=-1.454;QD=5.61;ReadPosRankSum=-1.436;VQSLOD=0.1116;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:6,0:10:0.13:0,0,0	0/0:3,0:6:9.03:0,9,113	0/0:9,0:5:0.47:0,0,1	0/1:17,0:7:9:9,0,14	0/0:10,0:10:24.08:0,24,762	0/0:13,0:13:27.09:0,27,858	0/0:2,0:2:3.01:0,3,98	0/1:22,6:28:72.06:226,0,72	0/0:3,0:3:3.01:0,3,98	0/0:4,0:4:9.03:0,9,295	0/0:12,0:12:10.97:0,11,391	0/0:2,0:2:3.01:0,3,98	0/0:5,0:6:12.04:0,12,328	0/0:7,0:7:18.06:0,18,561	0/0:5,0:5:6.02:0,6,169	./.	0/0:3,0:6:5.98:0,6,59	0/0:7,0:10:0.13:0,0,73	0/0:4,0:4:8.91:0,9,64	0/0:8,0:11:20.52:0,21,173	0/1:9,0:10:4.23:4,0,29	0/0:4,0:4:12.04:0,12,389	0/0:7,0:6:11.91:0,12,379	0/0:4,0:4:12.04:0,12,390	0/0:13,0:13:21.07:0,21,687	1/1:3,2:5:6.02:102,6,0	1/1:6,6:12:12.04:248,12,0	1/1:5,11:17:6.02:102,6,0
chr10	22953411	.	GAAGA	G	12026.47	PASS	AB=0.571;AC=39;AF=0.696;AN=56;BaseQRankSum=15.189;DP=414;FS=61.792;HRun=0;HaplotypeScore=149.6664;InbreedingCoeff=0.8955;MQ=85.39;MQ0=0;MQRankSum=-15.251;QD=46.98;ReadPosRankSum=5.322;VQSLOD=2.6343;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:2,6:8:25.43:261,0,25	1/1:1,8:9:24.08:429,24,0	0/0:23,0:23:63.21:0,63,1501	0/0:16,0:16:42.14:0,42,1062	1/1:0,21:21:57.19:1040,57,0	1/1:1,19:20:57.20:1063,57,0	1/1:0,10:10:30.10:559,30,0	0/0:44,0:44:99:0,126,3268	1/1:0,14:14:39.13:727,39,0	1/1:2,13:15:42.14:780,42,0	1/1:3,10:13:30.08:526,30,0	1/1:1,12:13:36.12:671,36,0	1/1:1,11:12:33.11:615,33,0	1/1:1,12:13:36.12:652,36,0	0/0:9,0:9:27.08:0,27,667	0/0:10,0:10:30.09:0,30,747	1/1:1,3:4:6.02:112,6,0	1/1:1,6:7:18.06:318,18,0	1/1:1,13:14:39.13:727,39,0	1/1:3,14:17:36.12:671,36,0	1/1:3,8:11:17.36:334,17,0	1/1:2,16:18:45.15:808,45,0	1/1:1,15:16:42.14:783,42,0	1/1:3,9:12:26.70:502,27,0	1/1:1,8:9:24.08:447,24,0	0/0:25,0:25:75.21:0,75,1923	0/0:17,0:17:42.14:0,42,1049	0/0:14,0:14:42.14:0,42,1120
chr10	22953453	.	AGG	A	12469.98	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=10.121;DP=451;FS=18.750;HRun=2;HaplotypeScore=115.5480;InbreedingCoeff=0.9944;MQ=86.88;MQ0=0;MQRankSum=-9.785;QD=43.00;ReadPosRankSum=4.104;VQSLOD=3.6192;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,9:8:24.08:390,24,0	1/1:0,6:6:18.06:293,18,0	0/0:22,0:22:63.22:0,63,1276	0/0:17,0:17:49.97:0,50,886	1/1:0,16:16:36.12:586,36,0	1/1:0,29:29:84.29:1366,84,0	1/1:0,17:17:51.17:830,51,0	0/0:33,0:33:96.31:0,96,1850	1/1:0,19:19:57.19:928,57,0	1/1:0,16:16:48.16:782,48,0	1/1:0,13:13:33.11:537,33,0	1/1:0,17:17:42.14:683,42,0	1/1:0,17:17:48.16:781,48,0	1/1:0,14:14:36.12:586,36,0	0/0:13,0:13:39.13:0,39,792	0/0:16,0:16:45.15:0,45,912	1/1:0,6:6:18.06:293,18,0	1/1:0,7:7:18.06:282,18,0	1/1:0,17:17:47.05:772,47,0	1/1:0,21:21:54.18:878,54,0	1/1:0,14:14:21.07:342,21,0	1/1:0,12:12:30.10:486,30,0	1/1:0,16:16:45.15:731,45,0	1/1:0,16:16:33.11:534,33,0	1/1:0,8:8:24.08:391,24,0	0/0:28,0:28:84.29:0,84,1695	0/0:19,0:19:57.18:0,57,1116	0/0:13,0:13:39.13:0,39,792
chr10	22955989	.	CCTT	C	22145.02	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=17.296;DP=826;FS=7.159;HRun=0;HaplotypeScore=130.4389;InbreedingCoeff=0.9977;MQ=80.50;MQ0=0;MQRankSum=-6.626;QD=41.32;ReadPosRankSum=5.530;VQSLOD=5.6875;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,144,3319	1/1:0,6:6:18.06:307,18,0	0/0:34,0:34:99:0,102,2269	0/0:28,0:28:62.38:0,62,1444	1/1:4,27:31:67.11:1126,67,0	1/1:1,26:27:63.22:1072,63,0	1/1:0,21:21:51.17:868,51,0	0/0:26,0:26:78.27:0,78,1797	1/1:0,12:12:36.12:613,36,0	1/1:1,29:30:84.25:1402,84,0	1/1:1,23:24:60.21:1021,60,0	1/1:1,30:31:72.25:1226,72,0	1/1:3,31:34:78.27:1329,78,0	1/1:3,20:23:54.18:918,54,0	0/0:36,0:36:99:0,102,2307	0/0:33,0:33:99:0,99,2211	1/1:3,39:42:99:1789,105,0	1/1:1,14:15:19.14:593,19,0	1/1:1,17:18:51.14:838,51,0	1/1:0,36:36:90.31:1532,90,0	1/1:2,46:48:99:2044,120,0	1/1:1,32:33:75.26:1278,75,0	1/1:1,30:31:66.21:1123,66,0	1/1:2,36:38:87.30:1482,87,0	1/1:1,35:36:93.32:1584,93,0	0/0:35,1:36:57.33:0,57,2344	0/0:33,0:33:99:0,99,2279	0/0:15,0:15:45.15:0,45,1037
chr10	22956084	.	C	CT	509.76	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-3.913;DP=668;FS=7.199;HRun=9;HaplotypeScore=68.4631;InbreedingCoeff=0.9591;MQ=67.85;MQ0=0;MQRankSum=-0.649;QD=23.17;ReadPosRankSum=0.751;VQSLOD=4.5116;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,20:22:34.11:604,34,0	0/0:8,0:8:24:0,24,208	0/0:6,0:6:12:0,12,104	0/0:10,0:10:17.85:0,18,140	0/0:36,0:36:95.97:0,96,833	0/0:35,0:35:98.97:0,99,860	0/0:18,0:18:50.95:0,51,434	0/0:33,0:33:77.95:0,78,675	0/0:17,0:17:41.97:0,42,364	0/0:26,0:26:62.97:0,63,547	0/0:31,2:33:50.75:0,51,666	0/0:29,0:29:71.87:0,72,620	0/0:30,0:30:77.96:0,78,673	0/0:21,0:21:44.97:0,45,391	0/0:27,0:27:80.95:0,81,696	0/0:21,0:21:44.96:0,45,390	0/0:30,0:29:80.97:0,81,703	0/0:18,0:18:44.98:0,45,390	0/0:21,0:22:50.01:0,50,423	0/0:22,1:23:29.81:0,30,488	0/0:14,0:14:35.99:0,36,313	0/0:25,0:25:65.78:0,66,560	0/0:24,0:24:62.92:0,63,547	0/0:14,0:14:32.98:0,33,286	0/0:25,0:25:62.98:0,63,547	0/0:41,1:42:71.78:0,72,852	0/0:43,0:43:99:0,111,963	0/0:16,0:16:38.98:0,39,339
chr10	22956120	.	A	AT	1305.58	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-9.153;DP=641;FS=2.702;HRun=9;HaplotypeScore=62.5230;InbreedingCoeff=0.9347;MQ=74.00;MQ0=0;MQRankSum=-0.346;QD=24.63;ReadPosRankSum=-0.785;VQSLOD=4.2366;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:24:58.76:0,59,494	0/0:8,0:8:20.97:0,21,177	0/0:13,0:14:26.99:0,27,233	0/0:8,0:8:14.99:0,15,129	0/0:27,0:27:74.95:0,75,645	0/0:28,0:28:74.97:0,75,651	0/0:14,1:15:5.81:0,6,279	0/0:33,0:33:77.92:0,78,668	0/0:18,0:18:41.97:0,42,361	0/0:35,0:35:95.97:0,96,833	0/0:22,0:22:59.99:0,60,521	0/0:22,0:23:65.01:0,65,553	0/0:35,0:35:95.97:0,96,833	0/0:16,0:16:47.97:0,48,413	1/1:3,26:29:69.19:763,69,0	1/1:2,22:24:60.16:664,60,0	0/0:25,0:24:62.97:0,63,543	0/0:13,0:13:29.90:0,30,248	0/0:20,0:20:23.35:0,23,320	0/0:24,0:24:59.96:0,60,521	0/0:10,0:10:26.97:0,27,230	0/0:35,0:36:88.95:0,89,750	0/0:13,0:13:38.99:0,39,339	0/0:17,0:17:50.99:0,51,442	0/0:26,0:26:56.96:0,57,495	0/0:36,0:36:89.96:0,90,781	0/0:47,0:47:99:0,123,1061	0/0:15,0:15:35.98:0,36,312
chr10	22956383	.	G	GT	9985.67	PASS	AB=0.641;AC=42;AF=0.750;AN=56;BaseQRankSum=-9.385;DP=598;FS=10.536;HRun=9;HaplotypeScore=63.5664;InbreedingCoeff=0.8079;MQ=83.87;MQ0=1;MQRankSum=-3.945;QD=22.14;ReadPosRankSum=4.416;VQSLOD=5.1531;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:26:53.93:268,54,0	1/1:3,1:5:5.85:47,6,0	0/0:18,0:17:29.96:0,30,249	0/0:23,0:21:41.99:0,42,348	1/1:7,26:34:51.92:769,52,0	1/1:0,22:22:63.17:697,63,0	1/1:0,9:9:21.06:232,21,0	0/0:38,0:38:86.92:0,87,749	1/1:4,17:21:47.93:531,48,0	1/1:6,21:27:37.11:634,37,0	1/1:5,20:26:56.90:584,57,0	1/1:3,18:21:42.11:464,42,0	1/1:1,15:16:36.10:398,36,0	1/1:2,22:24:28.10:538,28,0	1/1:3,13:16:9.99:325,10,0	1/1:0,14:14:35.95:389,36,0	1/1:7,16:23:21.88:410,22,0	0/1:4,8:12:3.17:148,0,3	1/1:5,12:17:39.10:426,39,0	1/1:6,32:39:96.04:1027,96,0	0/1:8,7:15:21.14:236,0,21	1/1:3,16:19:45.08:482,45,0	1/1:2,19:22:53.98:576,54,0	1/1:2,9:11:15.04:166,15,0	1/1:7,25:32:37.12:638,37,0	0/0:21,1:22:23.78:0,24,432	0/0:34,1:35:56.78:0,57,718	0/0:11,0:11:32.94:0,33,275
chr10	22956715	.	TAC	T	94.64	PASS	AB=0.955;AC=5;AF=0.089;AN=56;BaseQRankSum=2.248;DP=682;FS=11.469;HRun=0;HaplotypeScore=118.4887;InbreedingCoeff=0.2852;MQ=59.29;MQ0=12;MQRankSum=0.856;QD=0.88;ReadPosRankSum=-1.838;VQSLOD=1.3042;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:25,10:33:11.64:132,12,0	0/0:2,0:2:6.02:0,6,97	0/0:32,0:12:14.64:0,15,183	0/0:41,0:24:28.73:0,29,404	0/0:27,0:27:48.16:0,48,760	0/0:22,0:22:29.96:0,30,479	0/0:25,0:25:38.64:0,39,628	0/1:28,2:30:48.96:49,0,575	0/0:24,0:22:52.22:0,52,750	0/0:23,0:23:39.13:0,39,629	0/0:19,0:19:42.10:0,42,622	0/0:22,0:22:39.13:0,39,616	0/0:22,0:22:51.15:0,51,753	0/0:23,0:22:42.61:0,43,663	0/0:28,0:28:57.67:0,58,913	0/0:23,1:24:4.63:0,5,517	0/0:24,0:24:45.15:0,45,726	0/0:24,0:24:45.01:0,45,618	0/1:17,0:15:6.27:6,0,376	0/0:25,0:25:47.76:0,48,746	0/0:42,0:41:69.16:0,69,1007	0/0:24,0:24:44.74:0,45,657	0/1:24,2:26:21.90:22,0,592	0/0:23,0:22:18.49:0,18,291	0/0:26,0:25:39.13:0,39,624	0/0:23,0:22:49.41:0,49,773	0/0:22,0:22:45.15:0,45,693	0/0:7,0:7:12.03:0,12,158
chr10	22956752	.	G	GCACA	5124.77	PASS	AB=0.758;AC=46;AF=0.885;AN=52;BaseQRankSum=-0.232;DP=686;FS=1.463;HRun=0;HaplotypeScore=167.9767;InbreedingCoeff=0.1950;MQ=47.59;MQ0=15;MQRankSum=-0.739;QD=8.03;ReadPosRankSum=1.389;VQSLOD=4.2076;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:34,0:34:13.38:105,13,0	1/1:4,4:10:11.78:227,12,0	./.	0/0:19,0:6:7.31:0,7,99	./.	0/1:17,0:22:0.04:0,0,0	1/1:24,0:23:2.12:26,2,0	0/1:32,0:35:37.85:119,0,38	1/1:23,0:21:17.16:215,17,0	1/1:18,0:17:13.77:81,14,0	1/1:18,0:18:6.02:119,6,0	1/1:24,0:24:19.79:205,20,0	1/1:24,0:24:27.10:196,27,0	1/1:29,0:28:17.25:118,17,0	1/1:25,0:25:16.20:196,16,0	1/1:26,0:26:15.02:125,15,0	1/1:12,14:32:31.78:446,32,0	1/1:14,7:22:21.94:424,22,0	1/1:19,3:21:27.62:334,28,0	0/1:14,10:28:24.60:231,0,25	0/1:29,2:51:9.62:476,0,10	1/1:22,0:19:8.45:82,8,0	1/1:24,0:24:6.02:137,6,0	1/1:25,0:24:4.78:35,5,0	1/1:19,0:31:2.99:24,3,0	1/1:10,11:19:32.33:631,32,0	1/1:12,12:29:20.25:360,20,0	1/1:2,5:7:11.78:212,12,0
chr10	22956759	.	C	CACACATACAT	198.48	PASS	AB=1.000;AC=8;AF=0.143;AN=56;BaseQRankSum=5.435;DP=716;FS=6.207;HRun=0;HaplotypeScore=241.3811;InbreedingCoeff=0.0261;MQ=47.88;MQ0=13;MQRankSum=0.045;QD=1.12;ReadPosRankSum=2.434;VQSLOD=2.0223;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,17:38:5.61:167,6,0	0/0:11,0:11:14.64:0,15,167	0/0:7,0:2:2.99:0,3,23	0/0:19,0:10:27.66:0,28,448	0/0:31,0:31:39.03:0,39,469	0/0:23,0:23:27.08:0,27,333	0/1:23,0:22:6.05:6,0,209	0/0:42,0:38:78.57:0,79,1158	0/1:25,0:23:27.08:27,0,346	0/0:21,0:20:22.99:0,23,419	0/1:17,0:17:8.92:9,0,159	0/0:25,0:25:11.57:0,12,377	0/0:22,0:22:1.99:0,2,253	0/0:30,0:29:25.55:0,26,348	0/1:27,0:27:40.30:40,0,300	0/0:23,0:23:21.50:0,21,280	0/0:35,0:35:33.29:0,33,441	0/0:22,0:22:10.54:0,11,343	0/0:24,0:21:39.05:0,39,423	0/0:29,0:29:46.48:0,46,649	0/0:56,0:54:59.89:0,60,1201	0/1:23,0:20:45.30:45,0,167	0/1:23,0:23:32.20:32,0,47	0/0:26,0:25:16.71:0,17,203	0/0:33,0:32:18.03:0,18,250	0/0:21,0:18:3.98:0,4,270	0/0:31,0:30:34.77:0,35,350	0/0:8,0:7:10.72:0,11,104
chr10	22957840	.	TA	T	2837.67	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=8.308;DP=506;FS=3.907;HRun=5;HaplotypeScore=49.0066;InbreedingCoeff=0.9824;MQ=72.74;MQ0=1;MQRankSum=1.574;QD=28.66;ReadPosRankSum=-0.870;VQSLOD=3.4886;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:42.02:0,42,512	0/0:13,0:13:36.12:0,36,492	0/0:7,0:7:12.04:0,12,151	0/0:9,0:9:20.97:0,21,243	0/0:32,0:32:90.30:0,90,1230	0/0:21,0:21:60.20:0,60,821	0/0:7,0:7:18.05:0,18,230	1/1:2,34:36:99:1127,102,0	0/0:11,0:11:30.10:0,30,410	0/0:29,0:29:78.26:0,78,1067	0/0:25,0:25:72.23:0,72,969	0/0:16,0:16:48.16:0,48,654	0/0:12,0:12:33.11:0,33,451	0/0:9,0:9:21.07:0,21,286	0/0:23,0:23:60.18:0,60,782	0/0:15,0:15:45.14:0,45,592	0/0:22,0:22:60.17:0,60,800	0/0:13,0:12:39.13:0,39,533	0/0:17,0:17:48.16:0,48,657	0/0:19,0:19:54.18:0,54,739	0/0:7,0:6:15.05:0,15,205	0/0:19,0:19:54.18:0,54,738	0/0:22,0:22:57.19:0,57,779	0/0:14,0:14:39.13:0,39,523	0/0:29,0:28:87.27:0,87,1172	1/1:2,21:23:63.18:715,63,0	1/1:1,21:22:57.16:646,57,0	1/1:0,18:18:45.13:510,45,0
chr10	22958301	.	A	ACAAC	2872.42	PASS	AB=0.873;AC=22;AF=0.393;AN=56;BaseQRankSum=12.708;DP=445;FS=26.743;HRun=0;HaplotypeScore=109.9721;InbreedingCoeff=-0.5305;MQ=57.37;MQ0=4;MQRankSum=-8.712;QD=7.66;ReadPosRankSum=5.193;VQSLOD=0.3741;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:41.69:0,42,608	0/0:4,0:4:12.02:0,12,137	0/0:16,0:11:18.32:0,18,366	0/0:13,0:3:4.81:0,5,76	0/1:21,0:21:99:164,0,381	0/1:9,0:13:99:165,0,148	0/1:13,0:19:99:218,0,208	0/1:28,0:28:29.58:30,0,600	0/1:13,0:14:99:194,0,172	0/1:10,2:23:99:223,0,294	0/1:14,0:16:99:212,0,222	0/1:18,0:18:99:156,0,276	0/1:10,0:17:99:241,0,134	0/1:11,0:11:99:162,0,177	0/0:3,0:3:6.02:0,6,118	0/0:7,0:7:15.05:0,15,246	0/1:25,0:25:99:112,0,283	0/1:17,0:16:61.88:62,0,135	0/0:10,0:10:13.51:0,14,279	0/1:21,0:21:68.27:68,0,340	0/1:8,0:8:24.73:25,0,130	0/1:12,0:12:99:141,0,167	0/1:16,0:20:99:256,0,169	0/1:11,0:15:64.89:65,0,100	0/1:15,0:19:99:329,0,117	0/1:14,0:21:84.10:84,0,364	0/1:8,0:18:55.43:55,0,202	1/1:2,0:16:15.35:76,15,0
chr10	22958319	.	CAACAA	C	433.40	PASS	AB=0.966;AC=3;AF=0.054;AN=56;BaseQRankSum=1.469;DP=449;FS=2.372;HRun=0;HaplotypeScore=132.6406;InbreedingCoeff=0.5523;MQ=54.71;MQ0=16;MQRankSum=-3.882;QD=10.57;ReadPosRankSum=0.568;VQSLOD=3.1071;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:5,8:13:19.04:524,19,0	0/0:1,0:1:3.01:0,3,39	0/0:29,0:10:20.48:0,20,383	0/1:27,0:8:5.75:6,0,24	0/0:21,0:20:54.18:0,54,1225	0/0:13,0:11:32.51:0,33,596	0/0:17,0:17:48.14:0,48,1139	0/0:28,0:27:79.50:0,79,1774	0/0:10,0:10:24.07:0,24,611	0/0:22,0:22:63.21:0,63,1461	0/0:18,0:18:54.09:0,54,1177	0/0:14,0:14:36.12:0,36,846	0/0:14,0:14:24.55:0,25,598	0/0:11,0:11:27.09:0,27,653	0/0:4,0:3:6.02:0,6,175	0/0:6,0:6:12.04:0,12,371	0/0:24,0:24:72.24:0,72,1693	0/0:19,0:18:51.06:0,51,1257	0/0:10,0:10:30.10:0,30,508	0/0:18,0:18:54.18:0,54,1221	0/0:7,0:7:18.06:0,18,392	0/0:11,0:11:33.11:0,33,729	0/0:19,0:19:57.09:0,57,1372	0/0:12,0:12:27:0,27,513	0/0:21,0:20:60.16:0,60,1411	0/0:23,0:22:63.21:0,63,1304	0/0:18,0:17:33.09:0,33,763	0/0:17,0:17:21.07:0,21,504
chr10	22958325	.	C	CAACA	6862.36	PASS	AB=0.980;AC=27;AF=0.482;AN=56;BaseQRankSum=1.292;DP=492;FS=1.917;HRun=0;HaplotypeScore=118.8488;InbreedingCoeff=-0.4575;MQ=57.47;MQ0=16;MQRankSum=-2.278;QD=15.74;ReadPosRankSum=6.835;VQSLOD=4.1002;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:13,0:13:24.75:25,0,53	0/0:3,0:3:8.95:0,9,65	0/0:39,0:15:6.64:0,7,115	0/1:29,0:9:3.44:3,0,7	0/1:24,0:23:78.73:364,0,79	1/1:16,0:14:40.74:373,41,0	0/1:15,0:15:61.67:215,0,62	0/1:11,14:28:35.96:451,0,36	1/1:10,0:10:15.31:295,15,0	0/1:21,0:21:82.87:331,0,83	0/1:17,0:17:67.39:353,0,67	0/1:14,0:14:34.77:291,0,35	0/1:19,0:19:17.26:317,0,17	0/1:11,0:11:17.43:282,0,17	0/0:7,0:6:5.95:0,6,44	0/0:7,0:7:8.59:0,9,52	0/1:24,0:24:61.44:476,0,61	0/1:19,0:18:0.34:376,0,0	0/1:12,0:12:30.25:30,0,128	0/1:20,0:20:52.79:354,0,53	0/1:9,0:9:48.63:71,0,49	1/1:11,0:11:8.11:296,8,0	0/1:23,0:24:28.14:451,0,28	0/1:12,0:12:36.91:242,0,37	0/1:23,0:22:38.85:470,0,39	0/1:26,0:25:99:315,0,158	0/1:20,0:19:26.16:264,0,26	0/1:15,1:17:0.77:219,0,1
chr10	22958326	.	A	AACAAC	7605.28	PASS	AB=0.947;AC=27;AF=0.482;AN=56;BaseQRankSum=0.198;DP=504;FS=2.996;HRun=0;HaplotypeScore=127.9164;InbreedingCoeff=-0.5248;MQ=57.86;MQ0=16;MQRankSum=-5.053;QD=17.09;ReadPosRankSum=9.778;VQSLOD=3.4888;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:13,0:13:12.76:13,0,197	0/0:3,0:3:8.49:0,8,42	0/0:41,0:15:20.76:0,21,188	0/1:39,0:13:15.70:16,0,30	0/1:16,6:23:51.39:618,0,51	0/1:16,0:15:50.82:330,0,51	0/1:15,0:15:17.33:464,0,17	0/1:28,0:27:60.17:60,0,150	1/1:7,3:10:11.82:500,12,0	0/1:21,0:21:59.44:539,0,59	0/1:14,3:17:46.48:576,0,46	0/1:13,1:14:40.34:433,0,40	0/1:19,0:19:37.94:508,0,38	0/1:10,1:11:7.89:441,0,8	0/0:7,0:6:6.01:0,6,66	0/0:8,0:8:9.02:0,9,119	0/1:24,0:24:43.75:107,0,44	0/1:18,0:18:27.90:85,0,28	0/1:12,0:14:14.27:14,0,48	0/1:19,0:20:52.84:63,0,53	0/1:9,0:9:8.48:8,0,38	1/1:5,5:11:17.76:455,18,0	0/1:21,2:23:40.55:820,0,41	0/1:12,0:12:28.11:365,0,28	1/1:21,2:22:3.98:845,4,0	0/1:22,1:24:99:198,0,273	0/1:18,0:19:55.67:56,0,59	0/1:17,0:17:10.39:90,0,10
chr10	22958327	.	A	ACAAC	5845.96	PASS	AB=0.824;AC=22;AF=0.393;AN=56;BaseQRankSum=2.914;DP=501;FS=7.057;HRun=0;HaplotypeScore=125.4734;InbreedingCoeff=-0.5914;MQ=57.45;MQ0=17;MQRankSum=-5.276;QD=14.22;ReadPosRankSum=9.809;VQSLOD=2.4480;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:25.02:0,25,230	0/0:3,0:3:9.02:0,9,88	0/0:45,0:16:24.85:0,25,232	0/1:39,0:13:5.49:5,0,74	0/1:16,6:21:99:491,0,174	0/1:16,0:15:34.58:274,0,35	0/1:12,3:15:78.93:311,0,79	0/1:28,0:27:61.65:62,0,252	0/1:5,5:10:1.19:335,0,1	0/1:17,2:19:99:362,0,173	0/1:14,3:17:99:435,0,122	0/1:7,7:14:99:342,0,106	0/1:14,5:19:99:372,0,116	0/1:7,3:11:47.02:336,0,47	0/0:8,0:7:6.01:0,6,68	0/0:7,0:7:9.03:0,9,122	0/1:11,0:23:99:170,0,129	0/1:10,0:17:53.70:129,0,54	0/0:13,0:14:15.14:0,15,230	0/1:14,0:20:89.81:90,0,150	0/1:7,0:9:8.38:8,0,105	0/1:4,4:8:6.57:302,0,7	0/1:18,4:23:99:650,0,141	0/1:7,3:12:89.86:242,0,90	0/1:21,4:24:90.77:621,0,91	0/1:24,1:24:99:138,0,422	0/1:20,0:19:65.76:66,0,112	0/1:17,0:17:20.68:105,0,21
chr10	22958337	.	A	AAC	5405.69	PASS	AB=0.838;AC=38;AF=0.679;AN=56;BaseQRankSum=3.362;DP=496;FS=1.356;HRun=0;HaplotypeScore=107.4351;InbreedingCoeff=0.5375;MQ=61.13;MQ0=16;MQRankSum=-3.558;QD=16.48;ReadPosRankSum=-3.211;VQSLOD=3.8801;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,0:15:25.18:240,25,0	0/0:4,0:4:4.52:0,5,11	0/0:47,0:17:9.73:0,10,183	0/0:38,0:16:1.17:0,1,58	1/1:15,6:20:18.36:266,18,0	1/1:6,0:17:33.85:232,34,0	0/1:10,3:14:8.79:121,0,9	0/0:23,0:22:1.78:0,2,343	1/1:4,5:9:19.66:246,20,0	0/1:16,2:18:15.15:182,0,15	1/1:13,2:17:7.65:189,8,0	1/1:9,4:13:25.64:274,26,0	1/1:16,4:20:38.15:375,38,0	1/1:7,3:11:23.15:243,23,0	1/1:1,5:6:2.79:53,3,0	1/1:0,7:8:8.96:123,9,0	1/1:13,11:25:32.77:599,33,0	1/1:8,7:17:30.93:461,31,0	0/1:15,1:16:2.51:137,0,3	1/1:15,6:22:36.05:550,36,0	1/1:9,2:11:11.75:179,12,0	1/1:3,3:7:16.83:170,17,0	1/1:18,4:23:28.69:383,29,0	0/1:6,2:11:5.36:78,0,5	1/1:18,4:22:18.82:306,19,0	0/0:26,1:26:16.91:0,17,557	0/0:21,0:20:24.91:0,25,201	0/0:8,0:8:6.58:0,7,57
chr10	22958364	.	C	CA	310.35	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.202;DP=418;FS=4.184;HRun=1;HaplotypeScore=76.5906;InbreedingCoeff=0.7925;MQ=81.30;MQ0=1;MQRankSum=-3.045;QD=25.86;ReadPosRankSum=-1.323;VQSLOD=3.1701;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,11:12:30.10:405,30,0	0/0:5,0:5:15.05:0,15,195	0/0:28,0:24:46.79:0,47,742	0/0:23,0:19:34.46:0,34,390	0/0:15,0:15:42.14:0,42,545	0/0:18,0:18:36.10:0,36,451	0/0:10,0:10:30.10:0,30,390	0/0:21,0:21:63.20:0,63,818	0/0:6,0:6:18.04:0,18,216	0/0:16,0:16:45.15:0,45,584	0/0:15,0:15:42.14:0,42,541	0/0:11,0:11:30.10:0,30,383	0/0:23,0:23:60.19:0,60,767	0/0:4,0:4:9.03:0,9,117	0/0:6,0:6:6.49:0,6,79	0/0:9,0:9:21.07:0,21,272	0/0:27,0:27:81.26:0,81,1042	0/0:21,0:20:54.18:0,54,699	0/0:13,0:13:33.10:0,33,418	0/0:20,0:20:60.20:0,60,779	0/0:14,0:14:42.14:0,42,545	0/0:13,0:13:36.11:0,36,450	0/0:20,0:20:57.18:0,57,735	0/0:7,0:7:15.05:0,15,190	0/0:14,0:14:42.13:0,42,538	0/0:21,0:21:60.19:0,60,778	0/0:21,0:20:48.06:0,48,622	0/0:4,0:4:9.03:0,9,117
chr10	22959259	.	CT	C	180.09	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=0.677;DP=498;FS=10.292;HRun=9;HaplotypeScore=130.2416;InbreedingCoeff=0.8541;MQ=70.98;MQ0=0;MQRankSum=-3.172;QD=15.01;ReadPosRankSum=-1.292;VQSLOD=2.2111;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,11:12:30.01:274,30,0	0/0:10,0:10:24.07:0,24,277	0/0:14,0:14:33.09:0,33,373	0/0:13,0:14:13.88:0,14,172	0/0:27,0:27:66.11:0,66,730	0/0:18,0:19:50.95:0,51,554	0/0:10,0:10:27.08:0,27,312	0/0:23,0:23:48.08:0,48,522	0/0:19,0:19:51.09:0,51,562	0/0:13,0:13:27.08:0,27,312	0/0:30,2:33:18.56:0,19,692	0/0:15,0:15:45.05:0,45,489	0/0:15,1:16:17.52:0,18,398	0/0:19,0:19:51.11:0,51,572	0/0:10,0:10:30.06:0,30,332	0/0:18,0:18:48.14:0,48,552	0/0:12,0:12:36.11:0,36,413	0/0:15,0:15:42.10:0,42,473	0/0:16,1:17:17.66:0,18,457	0/0:32,0:32:87.21:0,87,980	0/0:6,0:6:18.05:0,18,208	0/0:24,1:25:35.64:0,36,634	0/0:35,0:35:84.17:0,84,939	0/0:6,0:6:9.03:0,9,104	0/0:21,0:21:51.15:0,51,588	0/0:26,2:28:11.26:0,11,627	0/0:23,0:23:69.12:0,69,766	0/0:6,0:6:15.04:0,15,172
chr10	22959939	.	C	CTAAAGTTCATTACGTAG	1911.61	PASS	AB=0.714;AC=23;AF=0.958;AN=24;BaseQRankSum=-1.317;DP=38;FS=4.437;HRun=0;HaplotypeScore=27.1871;InbreedingCoeff=-0.1833;MQ=130.63;MQ0=0;MQRankSum=-0.485;QD=61.66;ReadPosRankSum=-0.763;VQSLOD=2.4281;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,0:1:3.01:71,3,0	./.	1/1:1,1:6:18.04:788,18,0	0/1:3,0:5:20.42:232,0,20	./.	./.	1/1:2,0:2:6.01:104,6,0	1/1:4,0:4:9.02:135,9,0	./.	1/1:2,0:2:6.02:186,6,0	1/1:3,0:3:3.01:58,3,0	./.	1/1:2,0:2:3.01:50,3,0	1/1:2,0:2:3.01:75,3,0	./.	./.	./.	./.	1/1:1,0:1:3.01:78,3,0	1/1:1,0:1:3.01:61,3,0	./.	1/1:2,0:2:6.02:154,6,0	./.	./.	./.	./.	./.	./.
chr10	22960852	.	G	GCCCT	1795.96	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-2.224;DP=643;FS=3.769;HRun=0;HaplotypeScore=122.9194;InbreedingCoeff=0.9938;MQ=81.76;MQ0=0;MQRankSum=-0.992;QD=59.87;ReadPosRankSum=3.316;VQSLOD=5.4226;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,27:30:75.17:1891,75,0	0/0:12,0:12:36.12:0,36,672	0/0:25,0:25:63.21:0,63,1110	0/0:24,0:24:68.68:0,69,1136	0/0:20,0:20:57.19:0,57,1046	0/0:30,0:30:87.23:0,87,1484	0/0:29,0:29:84.29:0,84,1537	0/0:22,0:22:56.22:0,56,1013	0/0:25,0:25:72.25:0,72,1343	0/0:27,0:27:81.27:0,81,1480	0/0:18,0:18:51.17:0,51,936	0/0:26,0:26:75.26:0,75,1394	0/0:37,0:37:99:0,108,1993	0/0:28,0:28:84.29:0,84,1567	0/0:35,0:35:93.32:0,93,1717	0/0:22,0:22:66.23:0,66,1201	0/0:24,0:24:72.23:0,72,1296	0/0:8,0:8:24.08:0,24,448	0/0:20,0:20:60.16:0,60,1023	0/0:19,0:19:45.14:0,45,796	0/0:30,0:30:78.27:0,78,1456	0/0:25,0:25:73.99:0,74,1261	0/0:16,0:16:48.12:0,48,818	0/0:24,0:24:69.24:0,69,1283	0/0:18,0:18:54.14:0,54,942	0/0:24,0:24:69.24:0,69,1272	0/0:18,0:18:51.14:0,51,865	0/0:7,0:7:21.07:0,21,392
chr10	22963031	.	CCT	C	770.76	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=3.214;DP=367;FS=4.518;HRun=0;HaplotypeScore=115.2111;InbreedingCoeff=0.5910;MQ=47.43;MQ0=28;MQRankSum=-4.754;QD=14.01;ReadPosRankSum=1.659;VQSLOD=3.6023;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:5:6.02:0,6,96	0/0:4,0:4:12.04:0,12,197	0/1:21,0:8:9.84:10,0,183	0/0:22,0:6:13.93:0,14,158	0/0:16,0:15:20.48:0,20,473	0/0:21,0:21:56.40:0,56,919	0/0:15,0:15:41.73:0,42,654	0/0:15,0:14:30.10:0,30,481	0/0:5,0:4:12.04:0,12,191	0/0:19,0:19:30.74:0,31,796	0/0:17,0:17:37.35:0,37,653	0/0:13,0:13:33.11:0,33,552	0/0:18,0:18:50.53:0,51,792	0/0:17,0:17:48.16:0,48,797	1/1:6,11:17:38.80:483,39,0	1/1:7,10:17:26.20:404,26,0	0/0:10,0:10:14.80:0,15,243	0/0:4,0:4:9.03:0,9,148	0/0:9,0:8:18.06:0,18,308	0/0:10,0:10:24.08:0,24,411	0/0:2,0:2:3.01:0,3,51	0/0:12,0:12:22.13:0,22,453	0/0:15,0:15:13.40:0,13,358	0/0:9,0:9:24.08:0,24,390	0/0:8,0:8:24.05:0,24,356	0/0:26,0:25:48.18:0,48,1018	0/0:13,0:13:2.93:0,3,138	0/0:5,0:4:9.03:0,9,154
chr10	22963063	.	T	TCC	2215.38	PASS	AB=0.931;AC=18;AF=0.321;AN=56;BaseQRankSum=5.983;DP=497;FS=60.128;HRun=0;HaplotypeScore=228.1094;InbreedingCoeff=-0.5034;MQ=34.74;MQ0=47;MQRankSum=-7.428;QD=6.24;ReadPosRankSum=-2.130;VQSLOD=0.9704;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:5,3:20:99:123,0,249	0/1:11,0:10:99:168,0,118	0/0:20,0:1:3.01:0,3,49	0/0:26,0:1:3.01:0,3,49	0/1:21,5:25:99:266,0,399	0/1:20,0:20:7.56:8,0,735	0/0:15,0:15:33.11:0,33,510	0/0:9,0:9:21.91:0,22,311	0/0:11,0:11:2.46:0,2,240	0/1:24,1:25:99:143,0,610	0/1:23,3:26:99:227,0,537	0/0:16,0:16:5.27:0,5,446	0/1:21,0:21:1.20:1,0,613	0/0:24,0:23:30.70:0,31,762	0/1:19,0:19:38.50:39,0,543	0/1:18,0:17:99:143,0,297	0/1:17,0:17:39.37:39,0,351	0/1:7,0:7:4.30:4,0,111	0/0:7,0:6:9.80:0,10,191	0/1:25,0:24:99:171,0,289	0/0:3,0:3:5.05:0,5,55	0/1:15,3:18:99:103,0,401	0/1:17,7:23:99:277,0,410	0/0:11,0:11:23.86:0,24,387	0/1:18,6:24:99:347,0,413	0/1:25,1:25:42.18:42,0,796	0/1:21,1:22:76.46:196,0,76	0/1:4,1:4:65.29:65,0,135
chr10	22963064	.	TTC	T	3596.81	PASS	AB=0.861;AC=22;AF=0.393;AN=56;BaseQRankSum=10.262;DP=489;FS=47.683;HRun=0;HaplotypeScore=178.8843;InbreedingCoeff=-0.7033;MQ=34.96;MQ0=46;MQRankSum=-8.472;QD=8.69;ReadPosRankSum=-2.827;VQSLOD=1.4077;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:21,0:20:21.18:21,0,192	0/1:10,1:10:99:159,0,159	0/0:18,0:1:3.01:0,3,61	0/0:26,0:1:3.01:0,3,61	0/1:17,9:25:99:435,0,352	0/1:16,4:20:99:120,0,887	0/0:12,1:13:33.07:0,33,587	0/0:9,0:9:20.28:0,20,335	0/1:6,5:11:99:230,0,259	0/1:17,7:24:99:310,0,690	0/1:21,4:25:99:110,0,590	0/1:12,4:16:99:145,0,491	0/1:14,7:21:99:281,0,695	0/1:18,5:22:99:218,0,782	0/1:18,1:19:68.52:69,0,621	0/1:15,2:16:99:154,0,393	0/1:15,2:17:76.87:77,0,427	0/1:6,1:7:75.82:76,0,121	0/1:7,0:6:12.57:13,0,221	0/1:24,0:23:99:192,0,364	0/0:3,0:3:5.61:0,6,67	0/1:14,3:17:96.17:96,0,419	0/1:19,6:24:99:310,0,483	0/1:9,2:11:21.63:22,0,433	0/1:17,8:25:99:372,0,476	0/1:23,1:23:29.08:29,0,707	0/1:21,2:23:48.79:161,0,49	0/0:5,0:4:3.71:0,4,169
chr10	22963070	.	TCTTCCTTC	T	4689.74	PASS	AB=0.981;AC=30;AF=0.536;AN=56;BaseQRankSum=-7.242;DP=490;FS=25.712;HRun=0;HaplotypeScore=222.3140;InbreedingCoeff=-0.6256;MQ=35.24;MQ0=42;MQRankSum=5.035;QD=10.44;ReadPosRankSum=-2.452;VQSLOD=2.2678;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:21,0:20:99:101,0,121	0/1:11,0:10:99:118,0,238	0/0:18,0:1:3.01:0,3,53	0/0:22,0:1:3.01:0,3,49	0/1:28,0:27:99:184,0,298	0/1:20,0:20:99:231,0,143	1/1:12,0:12:24.06:329,24,0	1/1:1,9:10:27.02:322,27,0	0/1:11,0:11:71.81:72,0,217	0/1:24,0:24:99:186,0,265	0/1:24,0:24:17.02:17,0,464	0/1:16,0:16:99:164,0,186	0/1:21,0:21:99:241,0,159	0/1:24,0:23:97.80:270,0,98	0/1:17,0:17:99:207,0,162	0/1:19,0:18:99:109,0,141	0/1:17,0:17:99:175,0,150	0/1:8,0:8:50.56:122,0,51	1/1:8,0:6:12.66:90,13,0	0/1:23,0:23:99:178,0,486	1/1:3,0:3:5.23:36,5,0	0/1:17,0:17:99:200,0,200	0/1:26,0:25:99:169,0,368	0/1:11,0:11:99:147,0,122	0/1:26,0:26:3.69:4,0,644	0/1:23,0:22:99:725,0,176	0/1:7,16:23:99:188,0,122	0/1:6,0:5:83.73:103,0,84
chr10	22963132	.	AC	A	12211.11	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=6.581;DP=526;FS=3.004;HRun=1;HaplotypeScore=93.8319;InbreedingCoeff=0.9969;MQ=70.70;MQ0=0;MQRankSum=-2.896;QD=38.52;ReadPosRankSum=1.000;VQSLOD=5.2575;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:57.17:0,57,883	1/1:0,5:5:15.05:210,15,0	0/0:17,0:16:45.13:0,45,667	0/0:19,0:20:50.97:0,51,688	1/1:1,18:19:48.12:648,48,0	1/1:0,18:18:51.13:691,51,0	1/1:0,14:14:33.11:461,33,0	0/0:26,0:26:69.22:0,69,1071	1/1:0,19:19:48.16:671,48,0	1/1:0,15:15:45.15:629,45,0	1/1:0,10:10:27.09:376,27,0	1/1:0,17:17:51.17:712,51,0	1/1:0,23:23:66.22:918,66,0	1/1:0,26:26:69.20:932,69,0	0/0:26,0:26:78.27:0,78,1241	0/0:28,0:28:75.26:0,75,1196	1/1:0,20:20:60.20:833,60,0	1/1:0,13:13:36.12:502,36,0	1/1:0,18:18:54.18:751,54,0	1/1:1,24:25:69.23:962,69,0	1/1:0,12:12:33.11:462,33,0	1/1:0,14:14:42.14:574,42,0	1/1:2,16:18:51.08:655,51,0	1/1:0,20:20:57.16:776,57,0	1/1:0,11:11:33.11:450,33,0	0/0:30,0:29:87.30:0,87,1388	0/0:28,0:27:66.23:0,66,1050	0/0:8,0:8:24.08:0,24,384
chr10	22963508	.	A	AGC	528.85	PASS	AB=1.000;AC=15;AF=0.300;AN=50;BaseQRankSum=1.170;DP=486;FS=17.639;HRun=0;HaplotypeScore=122.6256;InbreedingCoeff=0.4642;MQ=72.59;MQ0=7;MQRankSum=-1.547;QD=3.33;ReadPosRankSum=-4.319;VQSLOD=-0.6267;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:14.40:0,14,76	./.	./.	0/1:22,0:15:0:0,0,0	0/0:16,0:16:11.70:0,12,72	0/0:17,0:17:26.91:0,27,211	0/0:20,0:20:15.26:0,15,170	0/1:16,0:16:0:0,0,0	0/1:18,0:18:12.02:12,0,84	0/0:20,0:20:20.54:0,21,123	0/0:10,0:10:0.14:0,0,39	0/0:23,0:22:23.99:0,24,216	0/0:19,0:19:20.79:0,21,187	0/1:16,0:16:2.84:3,0,56	1/1:4,7:11:3.41:138,3,0	1/1:3,4:8:6.02:97,6,0	0/0:17,0:17:5.42:0,5,67	0/0:25,0:24:48.02:0,48,359	0/0:15,0:15:15.82:0,16,117	0/0:15,0:15:2.98:0,3,22	0/0:15,0:15:8.95:0,9,68	0/1:17,0:17:7.24:7,0,98	./.	0/0:30,0:30:8.10:0,8,305	0/0:15,0:15:6.77:0,7,88	1/1:24,0:24:3.85:176,4,0	1/1:10,0:10:9.78:58,10,0	1/1:17,0:17:27.79:182,28,0
chr10	22963519	.	G	GCACACA	1369.97	PASS	AB=0.951;AC=21;AF=0.420;AN=50;BaseQRankSum=0.646;DP=457;FS=3.252;HRun=0;HaplotypeScore=145.4445;InbreedingCoeff=0.1130;MQ=55.83;MQ0=7;MQRankSum=-2.255;QD=5.02;ReadPosRankSum=-2.044;VQSLOD=2.1054;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:18:0,18,233	./.	./.	0/0:12,0:6:5.17:0,5,22	0/1:17,0:17:4.49:4,0,12	1/1:18,0:18:3.45:86,3,0	0/1:15,1:16:30.17:88,0,30	0/0:10,0:10:8.97:0,9,87	1/1:10,7:20:7.14:278,7,0	1/1:15,0:15:16.06:195,16,0	1/1:9,1:10:0.73:93,1,0	0/1:27,0:27:1.30:76,0,1	0/1:14,0:22:19.56:33,0,20	0/0:5,12:18:3.33:0,3,8	0/0:13,0:13:18.05:0,18,285	0/0:5,0:5:6.02:0,6,67	0/1:17,0:17:71.34:71,0,162	0/1:27,0:25:99:129,0,626	0/1:12,0:12:56.09:56,0,134	0/0:13,0:13:5.98:0,6,70	0/0:9,0:9:9.03:0,9,139	1/1:12,1:14:0.70:121,1,0	./.	0/1:30,1:33:16.03:153,0,16	1/1:14,1:15:4.54:136,5,0	0/0:24,0:24:45.96:0,46,541	0/1:9,0:9:2.53:3,0,149	0/0:17,0:17:25.52:0,26,197
chr10	22963521	.	GCGCACACACA	G	2122.67	PASS	AB=1.000;AC=21;AF=0.438;AN=48;BaseQRankSum=-7.358;DP=448;FS=4.776;HRun=0;HaplotypeScore=148.8853;InbreedingCoeff=-0.6225;MQ=51.81;MQ0=8;MQRankSum=1.776;QD=5.56;ReadPosRankSum=-1.286;VQSLOD=2.0552;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,41:46:15.05:424,15,0	./.	./.	./.	0/1:16,0:16:33.27:33,0,159	0/1:18,0:18:99:121,0,347	0/1:17,0:17:43.81:44,0,512	0/1:10,0:10:0.16:0,0,8	0/1:19,0:19:59.81:60,0,449	0/1:15,0:15:45.08:45,0,963	0/1:9,0:9:33.70:34,0,201	0/1:29,0:28:99:155,0,400	0/1:22,0:22:82.77:172,0,83	0/1:17,0:17:35.96:46,0,36	0/0:14,0:14:21.07:0,21,881	0/0:6,0:6:6.02:0,6,278	0/1:7,0:20:30.46:30,0,281	0/1:26,0:25:99:244,0,868	0/1:9,0:9:53.82:54,0,427	0/0:4,0:11:6.01:0,6,56	0/1:7,0:7:21.40:41,0,21	0/1:14,0:14:92.93:93,0,197	./.	0/1:33,0:33:99:199,0,430	0/1:14,0:14:73.38:73,0,212	0/1:23,0:23:99:328,0,215	0/0:9,0:9:3.20:0,3,103	0/1:17,0:17:68.32:68,0,181
chr10	22963523	.	GCACACA	G	768.23	PASS	AB=0.600;AC=9;AF=0.180;AN=50;BaseQRankSum=3.067;DP=483;FS=0.921;HRun=0;HaplotypeScore=146.5880;InbreedingCoeff=0.6471;MQ=50.53;MQ0=10;MQRankSum=-4.272;QD=7.39;ReadPosRankSum=-0.103;VQSLOD=2.3650;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:44,0:44:15:174,15,0	./.	./.	./.	0/0:20,0:19:5.70:0,6,119	0/0:20,0:20:12.93:0,13,271	0/0:21,0:21:18.93:0,19,454	0/1:3,0:9:0:0,0,0	0/0:19,0:19:17.99:0,18,341	0/0:17,0:17:39.06:0,39,770	0/0:11,0:11:5.69:0,6,153	0/0:31,0:30:18.95:0,19,391	0/0:24,0:24:3.01:0,3,79	0/0:20,0:20:8.83:0,9,54	0/0:19,0:19:33.11:0,33,871	0/0:7,0:7:9.03:0,9,248	0/0:17,0:17:17.98:0,18,274	0/0:29,0:27:33.11:0,33,685	0/0:10,0:10:18.05:0,18,348	0/0:11,0:11:3.01:0,3,30	0/0:9,0:9:2.07:0,2,19	0/0:14,0:14:6.02:0,6,157	0/0:6,0:6:3.01:0,3,69	0/0:25,0:33:18.04:0,18,376	0/0:15,0:15:12.04:0,12,303	1/1:14,3:24:28.13:430,28,0	1/1:6,3:9:11.79:204,12,0	1/1:13,2:18:6.02:100,6,0
chr10	22963863	.	C	CTTTT	4708.11	PASS	AB=0.890;AC=47;AF=0.839;AN=56;BaseQRankSum=-1.656;DP=521;FS=13.507;HRun=13;HaplotypeScore=116.4475;InbreedingCoeff=-0.0264;MQ=38.42;MQ0=15;MQRankSum=0.946;QD=9.04;ReadPosRankSum=-2.901;VQSLOD=-0.1067;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:35,0:32:17.48:72,0,17	1/1:3,0:4:5.92:42,6,0	0/1:4,0:2:0:0,0,0	0/1:4,0:1:0:0,0,0	1/1:21,3:23:11.53:177,12,0	1/1:9,9:19:21.07:456,21,0	1/1:15,4:17:21.05:340,21,0	0/1:21,0:29:10.82:170,0,11	1/1:18,0:19:16.86:222,17,0	1/1:21,2:26:30.47:375,30,0	1/1:15,1:17:8.75:248,9,0	1/1:15,2:19:26.98:405,27,0	1/1:11,2:11:5.52:63,6,0	1/1:19,0:21:22.94:269,23,0	0/1:16,0:19:4.78:37,0,5	0/1:17,0:19:28.01:28,0,66	0/1:21,0:22:0.75:95,0,1	1/1:14,0:17:13.82:75,14,0	0/1:17,0:23:9.71:167,0,10	0/1:23,0:28:12.59:133,0,13	1/1:2,0:3:2.96:20,3,0	1/1:13,2:15:14.54:181,15,0	1/1:14,0:11:6.02:130,6,0	1/1:15,4:18:19.77:361,20,0	1/1:12,2:16:15.01:233,15,0	1/1:15,0:19:23.43:188,23,0	1/1:19,0:26:26.46:212,26,0	1/1:14,0:13:2.22:8,2,0
chr10	22966423	.	ATC	A	361.81	PASS	AB=0.932;AC=20;AF=0.385;AN=52;BaseQRankSum=1.675;DP=771;FS=3.953;HRun=0;HaplotypeScore=274.7127;InbreedingCoeff=-0.0606;MQ=39.43;MQ0=32;MQRankSum=1.231;QD=0.85;ReadPosRankSum=-0.313;VQSLOD=2.0740;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,4:17:0.47:1,0,0	0/0:9,0:8:14.73:0,15,94	./.	./.	0/1:41,4:43:0.22:0,0,34	0/1:36,1:36:9.97:18,0,10	1/1:14,2:14:2.90:16,3,0	0/0:46,0:43:63.03:0,63,755	0/1:16,1:17:6.94:7,0,12	0/1:31,3:32:87.86:117,0,88	0/0:27,2:27:4.34:0,4,56	0/0:20,1:20:3.71:0,4,35	0/1:40,2:42:27.68:28,0,110	0/0:25,1:26:8.64:0,9,54	1/1:36,0:33:1.36:3,1,0	0/0:33,0:32:10.22:0,10,67	1/1:9,1:10:13.83:93,14,0	0/1:4,1:5:9.46:46,0,9	0/1:12,1:11:34.48:57,0,34	0/1:31,1:29:37.62:38,0,101	0/1:13,2:14:50.82:53,0,51	0/0:15,1:15:4.43:0,4,45	0/1:35,2:34:2.77:3,0,17	0/1:16,1:17:1.72:2,0,14	0/1:49,2:50:23.03:23,0,38	0/0:31,0:29:26.80:0,27,434	0/0:41,0:37:47.72:0,48,540	0/0:25,0:24:30.81:0,31,314
chr10	22966425	.	C	CTA	6142.78	PASS	AB=0.971;AC=38;AF=0.704;AN=54;BaseQRankSum=-0.528;DP=773;FS=1.563;HRun=0;HaplotypeScore=257.4116;InbreedingCoeff=0.1296;MQ=39.10;MQ0=34;MQRankSum=5.662;QD=9.21;ReadPosRankSum=3.126;VQSLOD=4.5925;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:8.99:0,9,74	0/1:9,0:8:3.34:3,0,52	./.	0/0:39,0:1:2.92:0,3,17	1/1:38,5:43:51.03:483,51,0	1/1:30,4:34:46.06:569,46,0	1/1:14,2:14:11.97:123,12,0	0/1:44,0:41:50.84:51,0,701	0/1:13,4:17:7.29:49,0,7	1/1:28,7:33:32.37:810,32,0	1/1:24,5:27:22.79:277,23,0	1/1:13,5:20:26.81:329,27,0	1/1:32,9:43:40.35:543,40,0	1/1:19,5:26:23.41:282,23,0	1/1:34,1:32:9.36:76,9,0	0/1:33,0:32:21.30:87,0,21	0/1:8,0:9:5.23:78,0,5	1/1:5,0:5:13.51:108,14,0	0/1:14,0:12:33.19:33,0,78	0/1:31,0:28:5.40:5,0,130	0/0:16,0:15:17.05:0,17,165	1/1:11,3:15:25.35:337,25,0	1/1:30,7:34:38.43:403,38,0	1/1:14,4:18:20.99:215,21,0	1/1:35,15:50:41.07:447,41,0	0/1:29,0:27:99:325,0,270	0/1:44,0:40:99:147,0,226	0/1:25,0:24:76.49:361,0,76
chr10	22966441	.	C	CTA	2566.61	PASS	AB=0.821;AC=26;AF=0.481;AN=54;BaseQRankSum=1.933;DP=804;FS=15.042;HRun=0;HaplotypeScore=305.7603;InbreedingCoeff=-0.1934;MQ=35.87;MQ0=52;MQRankSum=1.533;QD=5.09;ReadPosRankSum=3.911;VQSLOD=1.4540;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:16,1:18:1.88:38,2,0	1/1:1,7:7:14.88:238,15,0	./.	0/0:58,0:5:2.20:0,2,20	0/1:32,8:38:41.51:94,0,42	0/1:26,7:31:15.48:15,0,97	1/1:12,1:11:6.32:34,6,0	0/0:42,0:41:99:0,117,1206	1/1:11,6:17:7.80:88,8,0	0/1:32,4:34:70.83:405,0,71	0/1:24,9:31:7.57:53,0,8	0/1:16,4:19:14.39:14,0,37	0/1:32,10:42:76.01:270,0,76	0/1:21,6:27:11.25:48,0,11	1/1:36,0:33:0.29:2,0,0	0/1:34,0:33:44.44:61,0,44	0/1:6,3:9:13.01:180,0,13	0/1:5,2:7:23.18:96,0,23	1/1:7,5:11:2.35:332,2,0	0/1:13,18:28:19.15:450,0,19	0/1:15,3:17:13.75:158,0,14	0/1:21,2:22:37.33:50,0,37	0/0:27,7:31:7.42:0,7,89	0/0:14,1:15:1.61:0,2,38	0/1:32,15:46:77.13:97,0,77	0/0:26,0:23:39.12:0,39,549	0/0:46,0:42:65.29:0,65,606	0/0:23,0:22:40.75:0,41,425
chr10	22966447	.	CTA	C	838.87	PASS	AB=0.959;AC=18;AF=0.321;AN=56;BaseQRankSum=-0.594;DP=789;FS=4.029;HRun=0;HaplotypeScore=296.8072;InbreedingCoeff=-0.2996;MQ=35.18;MQ0=52;MQRankSum=5.883;QD=1.82;ReadPosRankSum=-5.313;VQSLOD=1.4141;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:3.39:0,3,43	0/0:8,0:7:15.04:0,15,207	0/0:60,0:1:2.98:0,3,21	0/1:59,0:5:5.05:5,0,8	0/1:37,1:36:20.02:74,0,20	0/1:28,3:29:29.67:153,0,30	0/1:12,1:11:10.98:36,0,11	0/0:42,0:42:99:0,120,1359	0/0:18,0:18:5.02:0,5,43	0/1:32,3:33:99:219,0,241	0/1:33,0:31:30.13:30,0,41	0/1:21,0:20:47.13:66,0,47	0/1:37,2:39:69.18:69,0,132	0/1:28,0:28:20.54:21,0,45	0/0:38,0:35:4.41:0,4,47	0/0:33,0:32:11.52:0,12,151	0/1:9,1:10:14.27:32,0,14	0/1:6,0:7:6.58:7,0,40	0/0:12,0:10:17.11:0,17,193	0/0:30,0:27:19.73:0,20,344	0/1:16,0:15:1.79:2,0,146	0/1:21,1:21:3.25:77,0,3	0/1:28,1:27:28.04:68,0,28	1/1:11,1:12:7.13:54,7,0	0/1:49,0:48:64.02:64,0,116	0/0:24,0:22:3.27:0,3,525	0/0:46,0:42:32.76:0,33,700	0/1:19,1:20:14.73:15,0,264
chr10	22966474	.	CATCT	C	10133.07	PASS	AB=0.667;AC=49;AF=0.875;AN=56;BaseQRankSum=-1.498;DP=677;FS=3.889;HRun=0;HaplotypeScore=245.9439;InbreedingCoeff=0.6743;MQ=41.80;MQ0=19;MQRankSum=1.716;QD=16.92;ReadPosRankSum=4.242;VQSLOD=3.9555;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:19:10.69:0,11,229	1/1:2,7:8:9.50:153,10,0	0/0:30,0:5:14.98:0,15,239	0/0:25,0:10:10.81:0,11,169	1/1:14,24:37:24.08:379,24,0	1/1:7,19:27:28.92:461,29,0	0/1:5,5:10:4.72:187,0,5	1/1:16,22:32:45.07:688,45,0	1/1:8,10:18:3.94:53,4,0	1/1:13,20:33:57.17:933,57,0	1/1:8,31:38:31.92:484,32,0	1/1:6,15:21:26.23:454,26,0	1/1:13,19:32:33.58:557,34,0	1/1:4,18:22:16.38:256,16,0	1/1:12,25:35:17.65:305,18,0	1/1:13,12:25:12.62:249,13,0	1/1:2,7:10:18.06:304,18,0	1/1:3,4:7:5.58:71,6,0	1/1:3,11:14:33.10:522,33,0	1/1:3,22:24:22:356,22,0	1/1:3,9:13:5.95:101,6,0	1/1:4,13:16:6.49:103,6,0	1/1:9,14:21:19.28:307,19,0	1/1:5,7:13:8.45:151,8,0	1/1:16,33:49:54.93:844,55,0	1/1:4,17:19:48.14:766,48,0	1/1:16,26:38:66.69:1095,67,0	1/1:6,9:15:21.07:354,21,0
chr10	22966478	.	T	TATCTATC	7031.56	PASS	AB=1.000;AC=46;AF=0.821;AN=56;BaseQRankSum=-6.364;DP=663;FS=6.701;HRun=0;HaplotypeScore=275.1861;InbreedingCoeff=0.3870;MQ=43.56;MQ0=15;MQRankSum=3.882;QD=11.84;ReadPosRankSum=9.492;VQSLOD=2.0087;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:21.30:0,21,310	1/1:10,0:9:6.32:69,6,0	0/0:25,0:6:18.02:0,18,283	0/0:23,0:10:17.14:0,17,236	1/1:36,0:36:23.08:320,23,0	1/1:25,0:25:24.39:384,24,0	1/1:8,0:9:9.12:128,9,0	0/1:36,0:30:99:620,0,256	1/1:18,0:18:3.34:39,3,0	1/1:32,0:31:61.11:908,61,0	1/1:39,0:38:24.32:317,24,0	1/1:22,0:22:21.50:256,21,0	1/1:32,0:32:33.56:488,34,0	1/1:22,0:22:9.26:100,9,0	1/1:36,1:35:10.29:224,10,0	1/1:22,4:26:11.06:254,11,0	1/1:10,0:10:16.74:237,17,0	1/1:6,0:6:2.19:87,2,0	1/1:15,0:14:22.04:346,22,0	1/1:24,0:23:18.83:268,19,0	0/1:14,0:14:36.17:70,0,36	1/1:17,0:16:6.98:105,7,0	0/1:24,0:23:11.53:212,0,12	1/1:14,0:14:9.21:152,9,0	1/1:47,0:46:34.35:395,34,0	1/1:22,0:20:16.21:505,16,0	0/1:42,0:39:32.59:445,0,33	1/1:15,0:15:16.19:103,16,0
chr10	22966481	.	CTA	C	798.03	PASS	AB=0.997;AC=30;AF=0.536;AN=56;BaseQRankSum=6.989;DP=648;FS=0.000;HRun=0;HaplotypeScore=254.7637;InbreedingCoeff=-0.2944;MQ=45.93;MQ0=10;MQRankSum=-0.542;QD=1.38;ReadPosRankSum=11.088;VQSLOD=0.8062;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:17.64:0,18,286	0/1:10,0:9:13.22:13,0,32	0/0:24,0:8:20.67:0,21,334	0/0:19,1:10:17.71:0,18,257	1/1:35,1:36:0.25:34,0,0	0/1:25,0:25:17:46,0,17	0/1:10,0:10:13.18:18,0,13	0/1:34,0:28:23.72:24,0,449	0/1:16,0:16:2.43:2,0,28	0/1:30,0:30:77.03:77,0,136	1/1:36,1:36:4.90:50,5,0	0/1:22,0:22:40.63:41,0,60	0/1:31,0:31:35.33:53,0,35	0/1:23,0:23:9.21:25,0,9	1/1:36,0:34:15.59:49,16,0	0/1:26,0:26:24.18:24,0,28	1/1:10,0:10:14.70:47,15,0	0/0:6,0:6:0.63:0,1,35	0/1:14,0:13:37.86:38,0,74	0/1:25,0:24:31.58:32,0,37	0/1:14,0:14:4.74:5,0,57	0/1:17,0:16:4.61:5,0,74	0/1:24,0:23:26.72:27,0,46	0/1:14,0:14:9.89:10,0,72	1/1:46,0:45:24.77:108,25,0	0/1:23,0:21:51.04:51,0,144	0/1:38,2:38:99:130,0,146	1/1:15,0:15:16.60:54,17,0
chr10	22967083	.	A	AACACACAC	11350.41	PASS	AB=1.000;AC=52;AF=0.929;AN=56;BaseQRankSum=-1.440;DP=764;FS=9.358;HRun=0;HaplotypeScore=317.9704;InbreedingCoeff=0.5920;MQ=61.54;MQ0=11;MQRankSum=0.462;QD=15.72;ReadPosRankSum=3.111;VQSLOD=2.2667;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:40,0:39:20.64:377,21,0	1/1:7,0:7:11.97:256,12,0	0/0:42,0:24:10.41:0,10,273	0/1:36,0:23:2.67:3,0,223	1/1:33,0:33:30.08:580,30,0	1/1:24,0:23:17.87:357,18,0	1/1:25,0:26:10.90:236,11,0	1/1:33,0:32:15.05:277,15,0	1/1:22,0:22:1.16:229,1,0	1/1:41,0:39:67.19:1259,67,0	1/1:22,0:22:20.24:306,20,0	1/1:28,0:28:18.99:398,19,0	1/1:20,0:20:27.01:508,27,0	1/1:26,0:26:26:392,26,0	1/1:32,0:34:36.75:484,37,0	1/1:32,0:34:55.09:687,55,0	1/1:19,0:20:22.63:499,23,0	1/1:9,0:9:15.48:286,15,0	1/1:21,0:20:11.07:266,11,0	1/1:36,0:33:14.91:339,15,0	0/1:15,0:15:0:0,0,0	1/1:31,0:31:23.36:407,23,0	1/1:24,0:24:23.21:456,23,0	1/1:43,0:43:22.79:381,23,0	1/1:31,0:31:32.58:538,33,0	1/1:21,1:23:43.02:869,43,0	1/1:21,9:28:24.03:607,24,0	1/1:9,0:10:18.06:352,18,0
chr10	22967109	.	CAGAGAGAGAG	C	2820.90	PASS	AB=0.979;AC=29;AF=0.518;AN=56;BaseQRankSum=-2.060;DP=733;FS=5.168;HRun=0;HaplotypeScore=341.6445;InbreedingCoeff=-0.3274;MQ=42.11;MQ0=18;MQRankSum=-0.466;QD=4.39;ReadPosRankSum=-8.397;VQSLOD=0.0304;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:49,0:48:50.80:51,0,2272	0/1:7,0:8:25.95:26,0,130	0/0:19,0:6:5.15:0,5,74	0/0:18,0:10:14.13:0,14,280	1/1:31,0:30:14.31:141,14,0	0/1:24,1:25:0.94:72,0,1	1/1:31,1:32:6.71:43,7,0	0/1:37,0:35:99:117,0,234	0/1:25,0:25:0.62:349,0,1	1/1:34,0:33:35.29:946,35,0	0/1:17,0:18:5.15:5,0,20	0/1:33,0:33:15.30:169,0,15	1/1:21,2:23:5.83:176,6,0	0/0:32,1:32:16.31:0,16,63	0/1:34,0:34:34.66:35,0,186	0/1:33,0:33:59.98:60,0,203	0/1:23,0:22:17.06:17,0,300	0/1:11,0:11:50.05:50,0,64	0/1:13,0:11:29.36:29,0,258	0/1:28,0:26:70.24:70,0,72	0/0:21,0:20:15.87:0,16,278	0/1:28,2:29:14.96:38,0,15	0/1:22,0:23:13.77:53,0,14	1/1:41,1:42:11.35:123,11,0	0/1:27,0:28:33.53:75,0,34	0/1:24,0:23:99:226,0,279	0/1:22,0:20:20.95:21,0,284	0/1:11,0:10:46.64:92,0,47
chr10	22967113	.	GAGAGAGACAGAGAGAGAC	G	1728.91	PASS	AB=0.765;AC=8;AF=0.143;AN=56;BaseQRankSum=-3.017;DP=672;FS=36.854;HRun=0;HaplotypeScore=383.8265;InbreedingCoeff=-0.1881;MQ=40.72;MQ0=16;MQRankSum=-6.346;QD=7.52;ReadPosRankSum=-7.418;VQSLOD=-0.0761;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:43:51.18:0,51,4059	0/0:7,0:7:11.90:0,12,371	0/0:13,0:4:3:0,3,28	0/0:21,0:11:14.58:0,15,725	0/0:26,3:28:10.69:0,11,134	0/1:15,10:24:0.58:1,0,143	0/0:15,11:27:0.13:0,0,29	0/1:7,0:30:1.18:1,0,1375	0/1:13,12:25:99:464,0,124	0/1:29,5:30:99:1067,0,455	0/0:17,1:18:7.55:0,8,159	0/1:20,10:30:99:158,0,141	0/1:13,10:23:99:129,0,183	0/0:17,15:31:30.47:0,30,400	0/0:35,0:36:12.97:0,13,887	0/0:27,0:32:42.08:0,42,1698	0/0:20,0:19:13.60:0,14,988	0/0:12,0:12:9.03:0,9,271	0/0:12,0:10:5.69:0,6,967	0/0:29,0:26:9.81:0,10,405	0/0:19,0:18:19.18:0,19,839	0/0:24,1:24:5.47:0,5,146	0/1:19,4:23:21.24:21,0,133	0/1:38,0:38:5.06:5,0,129	0/0:19,1:20:17.94:0,18,172	0/0:18,0:21:57.14:0,57,1292	0/0:14,0:13:21.01:0,21,904	0/0:6,0:8:9.03:0,9,225
chr10	22967117	.	GAGAC	G	4346.46	PASS	AB=0.990;AC=39;AF=0.696;AN=56;BaseQRankSum=2.923;DP=653;FS=7.261;HRun=0;HaplotypeScore=278.0807;InbreedingCoeff=-0.0865;MQ=42.85;MQ0=16;MQRankSum=-3.813;QD=7.42;ReadPosRankSum=3.735;VQSLOD=2.7620;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:44:59.96:0,60,1328	0/1:8,1:9:27.44:159,0,27	0/1:12,0:3:1.44:1,0,24	0/0:22,0:12:3.96:0,4,227	0/1:26,0:25:22.66:28,0,23	0/1:23,0:23:24.97:25,0,49	1/1:25,0:25:8.64:48,9,0	0/1:32,0:30:37.83:352,0,38	1/1:24,0:24:26.81:205,27,0	0/1:33,0:29:99:215,0,237	1/1:19,0:19:15.33:107,15,0	1/1:29,0:29:16.74:118,17,0	0/1:22,0:22:6.46:66,0,6	1/1:31,0:30:21.76:170,22,0	1/1:35,3:38:32.84:321,33,0	1/1:27,2:29:50.76:433,51,0	1/1:18,2:19:0.48:331,0,0	0/1:9,0:9:47.41:47,0,72	1/1:10,3:11:26.56:399,27,0	0/1:26,1:24:40.11:167,0,40	1/1:18,1:18:18.06:335,18,0	1/1:24,0:23:18.67:131,19,0	1/1:23,0:23:16.28:104,16,0	0/1:37,0:37:1.44:31,0,1	0/1:20,0:20:13.85:95,0,14	0/1:22,0:21:99:342,0,119	1/1:14,0:13:13.48:75,13,0	0/1:6,0:5:38.99:39,0,41
chr10	22967119	.	GAC	G	2702.03	PASS	AB=0.944;AC=23;AF=0.411;AN=56;BaseQRankSum=-3.657;DP=646;FS=35.111;HRun=0;HaplotypeScore=270.3827;InbreedingCoeff=0.1053;MQ=44.10;MQ0=14;MQRankSum=2.660;QD=6.98;ReadPosRankSum=-0.075;VQSLOD=1.6849;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:42:60.11:0,60,909	0/1:9,0:9:19.35:111,0,19	0/0:9,0:3:2.01:0,2,45	0/1:22,0:12:4.85:5,0,149	0/0:26,0:25:9.29:0,9,48	0/0:23,0:23:12.86:0,13,78	0/0:25,0:25:4.51:0,5,13	0/1:31,0:30:99:228,0,114	0/1:23,0:23:9.41:23,0,9	0/1:32,0:28:60.23:60,0,219	0/0:19,0:19:11.17:0,11,42	0/1:29,0:29:0.26:0,0,16	0/0:21,0:21:3.10:0,3,52	0/0:30,0:29:19.81:0,20,79	1/1:10,28:38:33:451,33,0	1/1:10,21:31:43.73:700,44,0	1/1:18,2:19:5.03:271,5,0	0/1:2,8:10:24.63:25,0,69	1/1:14,0:12:31.34:266,31,0	0/1:26,1:24:40.66:100,0,41	1/1:16,3:18:18.03:199,18,0	0/0:23,0:22:7.65:0,8,24	0/0:21,0:21:4.94:0,5,15	0/1:37,1:38:29.19:29,0,44	0/0:19,0:19:3.79:0,4,36	0/1:20,3:22:99:275,0,126	1/1:15,0:14:17.27:107,17,0	0/1:6,0:5:20.85:28,0,21
chr10	22967125	.	GAGAGAC	G	3498.19	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=10.704;DP=697;FS=8.671;HRun=0;HaplotypeScore=298.8293;InbreedingCoeff=0.6664;MQ=52.91;MQ0=16;MQRankSum=-7.440;QD=9.21;ReadPosRankSum=-0.183;VQSLOD=0.8273;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:45:65.09:0,65,2093	0/0:9,0:9:6.24:0,6,62	0/1:19,0:8:14.56:15,0,118	0/0:33,0:19:5.54:0,6,520	1/1:20,7:26:12.50:152,12,0	1/1:13,8:21:11.27:71,11,0	1/1:20,5:25:11.68:141,12,0	0/0:36,0:35:26.34:0,26,681	1/1:21,2:23:27.05:406,27,0	1/1:26,4:26:43.76:703,44,0	1/1:8,12:20:20.65:266,21,0	1/1:24,4:28:24.03:274,24,0	1/1:14,6:20:17.08:259,17,0	1/1:28,2:29:29.73:284,30,0	0/0:37,0:37:29.92:0,30,323	0/0:33,0:33:6.82:0,7,441	0/0:22,0:21:2.83:0,3,287	0/0:12,0:12:11.80:0,12,116	0/0:18,0:16:27.40:0,27,531	0/0:32,0:29:8.93:0,9,279	0/0:22,0:21:20.90:0,21,211	1/1:21,5:25:18.97:190,19,0	1/1:17,4:21:17.22:192,17,0	1/1:24,10:34:17.57:240,18,0	1/1:19,4:23:20.40:182,20,0	0/1:24,0:23:99:113,0,272	0/0:16,0:15:2.96:0,3,297	0/1:9,0:8:12.75:13,0,172
chr10	22967127	.	GAGAC	G	4637.32	PASS	AB=0.996;AC=33;AF=0.589;AN=56;BaseQRankSum=9.037;DP=722;FS=7.045;HRun=0;HaplotypeScore=288.4911;InbreedingCoeff=0.3638;MQ=55.74;MQ0=17;MQRankSum=-8.454;QD=9.13;ReadPosRankSum=1.673;VQSLOD=2.8055;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,1:47:72.02:0,72,1682	0/1:9,0:9:36.38:36,0,54	0/1:22,0:10:13.57:14,0,156	0/0:39,0:24:1.06:0,1,424	1/1:15,13:27:12.42:152,12,0	1/1:19,2:21:11.92:147,12,0	1/1:20,4:24:9.90:147,10,0	0/0:37,0:36:77.07:0,77,790	1/1:17,6:23:27.08:468,27,0	1/1:34,3:33:75.37:801,75,0	1/1:14,6:20:21.42:333,21,0	1/1:21,7:28:24.02:375,24,0	1/1:17,2:19:18.06:254,18,0	1/1:20,10:29:30.09:507,30,0	0/1:35,0:35:12.28:12,0,227	0/1:31,1:32:29.34:29,0,411	0/1:23,0:22:66.49:66,0,143	0/0:12,0:12:3.64:0,4,71	0/0:20,0:18:10.45:0,10,376	0/0:33,0:30:13.94:0,14,251	0/1:23,0:22:45.54:46,0,106	1/1:10,16:25:19:338,19,0	1/1:15,7:22:18.06:303,18,0	1/1:35,4:39:19.25:190,19,0	1/1:9,14:23:20.99:347,21,0	0/1:24,0:23:72.03:72,0,254	0/0:16,0:15:17.64:0,18,258	0/0:9,0:8:1.03:0,1,146
chr10	22967129	.	GAC	G	2242.79	PASS	AB=1.000;AC=30;AF=0.536;AN=56;BaseQRankSum=11.348;DP=717;FS=15.781;HRun=0;HaplotypeScore=283.0934;InbreedingCoeff=0.6606;MQ=57.68;MQ0=15;MQRankSum=-9.142;QD=5.22;ReadPosRankSum=0.567;VQSLOD=1.4393;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:47:75.16:0,75,1264	0/1:9,0:9:10.82:11,0,57	0/0:23,0:11:0.06:0,0,144	0/0:41,0:26:20.63:0,21,389	1/1:26,2:27:11.84:89,12,0	1/1:21,0:21:11.85:79,12,0	1/1:23,0:23:8.86:64,9,0	0/0:37,0:36:91.32:0,91,784	1/1:23,0:23:26.92:229,27,0	1/1:32,1:31:88.39:672,88,0	1/1:19,0:19:21.25:147,21,0	1/1:26,2:28:23.90:215,24,0	1/1:19,0:19:17.80:126,18,0	1/1:30,0:29:28.02:195,28,0	0/1:35,0:35:20.58:21,0,63	0/1:32,0:32:8.52:9,0,151	0/1:24,0:23:2.17:2,0,151	0/0:12,0:12:9.38:0,9,45	0/0:20,0:18:32.02:0,32,419	0/0:28,5:30:34.37:0,34,301	0/0:24,0:23:21.37:0,21,172	1/1:25,0:24:18.37:134,18,0	1/1:22,0:22:17.87:136,18,0	1/1:36,0:36:20.20:131,20,0	1/1:21,2:23:20.94:192,21,0	0/0:23,0:23:17.61:0,18,254	0/0:16,0:15:25.55:0,26,246	0/0:10,0:9:2.55:0,3,129
chr10	22967139	.	GAC	G	147.11	PASS	AB=0.992;AC=12;AF=0.214;AN=56;BaseQRankSum=10.700;DP=767;FS=22.540;HRun=0;HaplotypeScore=287.1454;InbreedingCoeff=-0.0143;MQ=64.64;MQ0=12;MQRankSum=-6.408;QD=0.51;ReadPosRankSum=-4.362;VQSLOD=0.7458;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:51:90.20:0,90,1559	0/0:9,0:9:11.18:0,11,216	0/1:34,0:22:27.14:27,0,319	0/0:57,1:41:38.91:0,39,770	1/1:25,0:24:8.64:43,9,0	0/1:22,0:22:4.87:5,0,52	0/0:28,0:28:2.45:0,2,152	0/0:40,0:40:99:0,105,1569	0/0:21,0:21:6.78:0,7,61	0/0:27,1:26:25.61:0,26,359	0/1:20,0:20:7.15:46,0,7	0/1:28,1:29:1.26:1,0,77	0/1:21,0:21:6.47:6,0,63	0/1:32,0:31:34.67:35,0,102	0/0:30,0:30:53.75:0,54,704	0/0:33,0:33:65.17:0,65,986	0/0:27,0:27:50.70:0,51,780	0/0:13,0:13:17.41:0,17,246	0/0:23,0:22:66.12:0,66,1069	0/0:36,0:34:50.12:0,50,827	0/0:24,0:23:35.94:0,36,606	0/1:25,0:25:23.71:24,0,76	0/1:20,0:20:32.72:33,0,76	0/1:40,0:40:29.33:29,0,115	0/1:20,1:21:6.79:42,0,7	0/0:23,0:23:60.21:0,60,801	0/0:16,0:15:29.80:0,30,480	0/0:15,0:14:25:0,25,420
chr10	22967275	.	A	AAGAC	31986.01	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-8.081;DP=1009;FS=6.681;HRun=0;HaplotypeScore=155.8030;InbreedingCoeff=0.9777;MQ=68.91;MQ0=2;MQRankSum=-2.691;QD=36.47;ReadPosRankSum=5.106;VQSLOD=4.7802;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,38:47:75.25:1741,75,0	1/1:1,11:12:27.09:682,27,0	0/0:53,0:38:30.71:0,31,715	0/0:78,0:54:13.54:0,14,519	1/1:7,22:30:38.99:944,39,0	1/1:7,27:35:30.10:608,30,0	1/1:7,20:30:36.12:777,36,0	1/1:10,23:36:78.12:1334,78,0	1/1:4,29:34:57.19:1325,57,0	1/1:5,40:47:99:2681,126,0	1/1:3,16:22:41.97:890,42,0	1/1:8,26:37:57.19:1056,57,0	1/1:8,33:42:66.23:1629,66,0	1/1:2,38:41:75.25:1550,75,0	1/1:8,38:46:63.21:1458,63,0	1/1:10,33:45:69.24:1705,69,0	1/1:6,22:29:44.29:1058,44,0	1/1:2,9:11:15.05:379,15,0	1/1:6,17:22:51.13:1126,51,0	1/1:4,37:41:63.13:1461,63,0	1/1:9,44:55:69.71:1670,70,0	1/1:7,36:43:56.24:1280,56,0	1/1:2,21:24:29.21:717,29,0	1/1:4,37:43:45.06:1098,45,0	1/1:5,13:19:33.11:829,33,0	1/1:7,31:39:96.24:2116,96,0	1/1:4,27:33:54.12:1266,54,0	1/1:0,13:13:24.08:606,24,0
chr10	22967986	.	CG	C	1511.39	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.005;DP=796;FS=1.897;HRun=5;HaplotypeScore=83.5847;InbreedingCoeff=0.9994;MQ=88.01;MQ0=1;MQRankSum=-2.022;QD=27.48;ReadPosRankSum=0.398;VQSLOD=3.7151;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:96.21:0,96,1252	0/0:10,0:10:30.08:0,30,392	0/0:23,0:23:66.17:0,66,842	0/0:38,0:39:99:0,102,1359	0/0:30,0:30:90.27:0,90,1204	0/0:24,0:24:66.22:0,66,898	0/0:26,0:26:66.20:0,66,882	0/0:40,0:39:99:0,102,1346	0/0:32,0:32:96.31:0,96,1294	0/0:44,0:44:99:0,123,1599	0/0:22,0:22:66.21:0,66,883	0/0:28,0:28:84.23:0,84,1097	0/0:32,0:32:78.24:0,78,1046	0/0:31,0:31:90.30:0,90,1224	1/1:0,32:32:87.25:987,87,0	1/1:2,21:23:57.16:646,57,0	0/0:28,0:28:78.22:0,78,1039	0/0:16,0:16:40.71:0,41,591	0/0:24,0:24:66.18:0,66,855	0/0:29,0:29:80.84:0,81,1074	0/0:47,0:46:99:0,129,1711	0/0:18,0:18:48.16:0,48,653	0/0:30,0:30:87.29:0,87,1182	0/0:45,0:45:99:0,129,1718	0/0:21,0:21:63.21:0,63,859	0/0:27,0:27:72.22:0,72,955	0/0:29,0:29:81.22:0,81,1071	0/0:11,0:11:30.10:0,30,410
chr10	22968195	.	TG	T	6528.26	PASS	AB=0.885;AC=53;AF=0.946;AN=56;BaseQRankSum=3.251;DP=868;FS=1.962;HRun=2;HaplotypeScore=282.1383;InbreedingCoeff=0.5830;MQ=65.74;MQ0=1;MQRankSum=-1.694;QD=7.83;ReadPosRankSum=3.173;VQSLOD=2.4634;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:44,0:44:67.59:320,68,0	1/1:8,0:8:18.10:58,18,0	0/0:32,2:32:9.20:0,9,703	0/1:20,3:21:56.13:56,0,364	1/1:35,0:35:25.77:129,26,0	1/1:30,0:30:65.64:305,66,0	1/1:18,0:18:36.58:138,37,0	1/1:42,0:41:91.97:482,92,0	1/1:30,0:30:59.18:212,59,0	1/1:34,0:34:86.07:454,86,0	1/1:26,0:26:48.06:167,48,0	1/1:40,0:40:72.27:286,72,0	1/1:35,0:35:68.93:273,69,0	1/1:45,0:45:79.83:373,80,0	1/1:40,0:40:84.61:374,85,0	1/1:34,0:34:77.17:316,77,0	1/1:31,0:31:62.93:220,63,0	1/1:13,0:13:13.99:52,14,0	1/1:27,0:27:60.84:324,61,0	1/1:36,0:36:61.02:275,61,0	1/1:36,0:36:65.09:283,65,0	1/1:33,0:33:47.40:185,47,0	1/1:21,0:21:38.03:138,38,0	1/1:37,0:37:75.83:238,76,0	1/1:25,0:25:34.60:166,35,0	1/1:43,0:43:99:416,102,0	1/1:29,0:29:58.43:180,58,0	1/1:19,0:19:28.87:106,29,0
chr10	22968198	.	T	TA	9427.10	PASS	AB=0.903;AC=54;AF=0.964;AN=56;BaseQRankSum=4.007;DP=880;FS=5.937;HRun=2;HaplotypeScore=277.7800;InbreedingCoeff=-0.0343;MQ=68.17;MQ0=0;MQRankSum=-5.692;QD=10.71;ReadPosRankSum=3.745;VQSLOD=3.3659;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:43,0:43:93.04:436,93,0	1/1:9,0:9:24.55:114,25,0	0/1:35,2:36:25.46:25,0,631	0/1:20,3:22:99:101,0,338	1/1:36,0:36:65.64:302,66,0	1/1:29,0:30:65.21:274,65,0	1/1:17,0:17:41.69:218,42,0	1/1:41,0:40:99:584,103,0	1/1:30,0:30:69.91:302,70,0	1/1:36,0:36:97.76:661,98,0	1/1:26,0:26:65.71:332,66,0	1/1:39,0:39:88.78:468,89,0	1/1:37,0:37:82.93:373,83,0	1/1:45,0:45:93.57:441,94,0	1/1:38,0:38:86.11:410,86,0	1/1:34,0:34:85.37:410,85,0	1/1:32,0:32:79.05:361,79,0	1/1:13,0:13:27.68:122,28,0	1/1:30,0:30:75.11:437,75,0	1/1:37,0:37:82.31:397,82,0	1/1:35,0:35:73.84:330,74,0	1/1:32,0:32:71.11:304,71,0	1/1:23,0:23:48.41:217,48,0	1/1:37,0:37:96.03:430,96,0	1/1:26,0:26:52.56:248,53,0	1/1:45,0:45:99:641,120,0	1/1:29,0:29:74.80:303,75,0	1/1:19,0:19:43.64:186,44,0
chr10	22968224	.	CA	C	7874.18	PASS	AB=0.954;AC=52;AF=0.929;AN=56;BaseQRankSum=4.181;DP=791;FS=15.828;HRun=1;HaplotypeScore=241.8095;InbreedingCoeff=-0.0680;MQ=74.95;MQ0=0;MQRankSum=-3.106;QD=9.95;ReadPosRankSum=10.611;VQSLOD=0.2493;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:41,0:41:45.15:386,45,0	1/1:8,0:8:22.27:107,22,0	0/1:24,0:23:25.88:26,0,160	0/1:17,5:22:84.22:128,0,84	1/1:36,0:36:71.86:411,72,0	1/1:31,0:31:57.10:354,57,0	1/1:17,0:17:16.67:150,17,0	0/1:29,0:29:3.83:168,0,4	1/1:28,0:28:25.26:271,25,0	1/1:43,1:44:99:443,105,0	1/1:27,0:27:72.47:354,72,0	1/1:37,0:37:62.18:400,62,0	1/1:35,0:35:47.56:428,48,0	1/1:40,0:40:41.71:378,42,0	1/1:33,0:33:52.64:326,53,0	1/1:29,1:30:58.96:348,59,0	1/1:24,0:24:16.56:229,17,0	1/1:15,0:15:14.60:139,15,0	0/1:25,0:25:6.93:147,0,7	1/1:32,0:32:85.26:402,85,0	1/1:29,0:29:45.30:283,45,0	1/1:34,0:34:65.42:396,65,0	1/1:24,0:24:55.53:261,56,0	1/1:32,0:32:19.12:306,19,0	1/1:23,0:23:35.91:243,36,0	1/1:36,0:36:36.48:293,36,0	1/1:19,1:20:52.95:292,53,0	1/1:15,0:15:42.20:208,42,0
chr10	22968292	.	A	ATT	5282.19	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-1.854;DP=739;FS=3.093;HRun=10;HaplotypeScore=129.7244;InbreedingCoeff=0.9968;MQ=72.28;MQ0=0;MQRankSum=-1.518;QD=22.38;ReadPosRankSum=-1.214;VQSLOD=3.5386;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:3,0:25:56.77:0,57,259	1/1:2,0:12:24.38:85,24,0	0/0:15,0:14:29.86:0,30,272	0/0:16,0:16:19.61:0,20,330	0/0:39,0:42:99:0,104,1056	0/0:35,0:36:95.58:0,96,982	0/0:15,0:15:36.05:0,36,366	1/1:9,23:35:80.67:1072,81,0	0/0:24,0:24:66.11:0,66,664	0/0:53,0:54:99:0,132,1319	0/0:31,0:31:75.11:0,75,748	0/0:32,0:32:81.13:0,81,817	0/0:30,0:30:72.13:0,72,732	0/0:26,0:27:68.83:0,69,671	0/0:30,0:34:80.56:0,81,865	0/0:18,0:18:45.07:0,45,450	1/1:7,0:15:22.46:79,22,0	1/1:0,0:7:17.47:61,17,0	1/1:9,0:24:31.03:162,31,0	1/1:9,0:32:41.73:287,42,0	1/1:4,0:15:30.04:137,30,0	0/0:25,0:25:66.09:0,66,664	0/0:31,0:33:65.53:0,66,698	0/0:24,0:24:66.05:0,66,643	0/0:19,0:21:50.55:0,51,481	1/1:9,23:34:62.25:1220,62,0	1/1:4,34:42:99:1523,107,0	1/1:3,15:19:45.15:655,45,0
chr10	22969677	.	ATAT	A	2439.35	PASS	AB=1.000;AC=10;AF=0.185;AN=54;BaseQRankSum=8.983;DP=246;FS=13.473;HRun=0;HaplotypeScore=37.3922;InbreedingCoeff=0.5866;MQ=72.20;MQ0=0;MQRankSum=-1.688;QD=24.89;ReadPosRankSum=-1.177;VQSLOD=1.5276;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:11,0:11:16.85:17,0,102	0/0:5,0:5:12.04:0,12,250	0/1:3,0:4:4.88:5,0,16	0/0:5,0:5:3.15:0,3,12	0/0:6,0:6:15.05:0,15,308	0/0:24,0:24:60.21:0,60,1222	0/0:2,0:2:6.02:0,6,125	1/1:8,35:43:99:1490,105,0	0/0:2,0:2:6.02:0,6,125	0/0:10,0:10:24.08:0,24,491	0/0:6,0:6:18.05:0,18,337	0/0:2,0:2:3.01:0,3,63	0/0:7,0:7:15.05:0,15,313	0/0:6,0:6:18.05:0,18,334	0/0:9,0:9:24.08:0,24,468	0/0:1,0:1:3.01:0,3,63	0/0:15,0:14:38.89:0,39,780	0/0:10,0:10:21.07:0,21,437	0/0:8,0:8:18.06:0,18,354	0/0:8,0:8:15.05:0,15,313	./.	0/0:1,0:1:3.01:0,3,63	0/0:4,0:4:12.04:0,12,250	0/0:4,0:4:9.03:0,9,188	0/0:12,0:12:30.08:0,30,564	1/1:0,7:7:21.07:311,21,0	1/1:2,8:10:18.06:267,18,0	1/1:1,22:23:36.08:509,36,0
chr10	22969689	.	T	TTAA	238	PASS	AB=1.000;AC=3;AF=0.056;AN=54;BaseQRankSum=-0.142;DP=246;FS=0.000;HRun=0;HaplotypeScore=46.6379;InbreedingCoeff=0.4289;MQ=71.83;MQ0=0;MQRankSum=0.810;QD=21.64;ReadPosRankSum=-0.878;VQSLOD=2.8956;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,7:7:15.05:325,15,0	0/0:6,0:6:18.01:0,18,250	0/1:4,0:4:3.73:4,0,27	0/0:4,0:4:3.23:0,3,20	0/0:6,0:6:15.05:0,15,251	0/0:20,0:20:60.21:0,60,1009	0/0:4,0:4:9.02:0,9,127	0/0:40,0:40:9.80:0,10,729	0/0:3,0:3:9.02:0,9,127	0/0:11,0:11:33.09:0,33,470	0/0:7,0:7:18.05:0,18,278	0/0:3,0:3:9:0,9,101	0/0:9,0:9:24.05:0,24,332	0/0:7,0:7:18.04:0,18,276	0/0:9,0:9:27.06:0,27,386	0/0:2,0:2:6.01:0,6,76	0/0:14,0:13:42.04:0,42,638	0/0:8,0:8:19.98:0,20,355	0/0:9,0:9:27.03:0,27,355	0/0:6,0:6:18.05:0,18,280	./.	0/0:1,0:1:3.01:0,3,51	0/0:6,0:6:18.03:0,18,254	0/0:5,0:5:15.02:0,15,201	0/0:11,0:11:30.08:0,30,459	0/0:9,0:9:23.93:0,24,196	0/0:10,0:10:23.90:0,24,194	0/0:24,0:24:41.16:0,41,312
chr10	22970533	.	G	GT	20111.28	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-6.920;DP=484;FS=20.142;HRun=0;HaplotypeScore=37.4155;InbreedingCoeff=0.9902;MQ=80.52;MQ0=0;MQRankSum=-8.081;QD=43.63;ReadPosRankSum=5.667;VQSLOD=2.6102;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,22:22:63.21:1007,63,0	1/1:0,11:11:30.10:480,30,0	0/0:13,0:13:39.11:0,39,513	0/0:10,0:10:30.10:0,30,419	1/1:1,20:21:57.19:911,57,0	1/1:0,20:20:57.19:911,57,0	1/1:1,13:14:36.12:576,36,0	1/1:0,32:32:93.28:1439,93,0	1/1:0,12:12:33.11:528,33,0	1/1:0,24:24:72.25:1152,72,0	1/1:1,18:19:51.17:815,51,0	1/1:0,17:17:48.16:767,48,0	1/1:1,18:20:54.18:855,54,0	1/1:2,18:20:57.15:883,57,0	1/1:1,16:18:45.15:707,45,0	1/1:0,17:17:45.15:719,45,0	1/1:0,16:16:45.15:719,45,0	1/1:0,10:10:30.10:478,30,0	1/1:0,14:14:42.14:667,42,0	1/1:0,20:20:51.17:815,51,0	1/1:0,15:15:39.13:624,39,0	1/1:0,12:12:36.12:576,36,0	1/1:1,13:14:39.13:624,39,0	1/1:0,12:12:27.09:432,27,0	1/1:1,24:25:66.23:1055,66,0	1/1:1,16:17:48.15:741,48,0	1/1:0,34:33:87.30:1391,87,0	1/1:0,5:5:15.05:240,15,0
chr10	22971702	.	G	GTT	7454.51	PASS	AB=0.672;AC=49;AF=0.875;AN=56;BaseQRankSum=-0.220;DP=636;FS=3.412;HRun=12;HaplotypeScore=98.6703;InbreedingCoeff=0.1469;MQ=67.91;MQ0=1;MQRankSum=-0.861;QD=11.97;ReadPosRankSum=1.945;VQSLOD=3.7748;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:8,1:28:58.62:119,0,59	1/1:1,5:7:5.74:61,6,0	0/1:16,0:17:8.98:9,0,83	0/0:13,0:9:11.73:0,12,106	0/1:7,1:30:9.15:113,0,9	0/1:10,0:51:49.98:168,0,50	1/1:3,0:23:5.49:81,5,0	1/1:15,20:37:72.15:843,72,0	1/1:3,1:18:27.03:127,27,0	1/1:3,0:23:40.97:160,41,0	1/1:1,0:11:22.96:102,23,0	1/1:1,0:12:14.97:52,15,0	1/1:12,0:29:8.28:118,8,0	0/1:13,0:27:11.13:141,0,11	1/1:8,0:25:5.18:76,5,0	1/1:5,0:26:39.93:138,40,0	1/1:5,14:21:41.57:520,42,0	1/1:4,11:15:15.05:209,15,0	1/1:6,12:19:16.33:372,16,0	1/1:5,13:20:49.92:566,50,0	1/1:2,11:14:30.09:394,30,0	1/1:5,1:21:10.35:125,10,0	1/1:7,2:24:40.39:220,40,0	1/1:0,1:14:32.95:146,33,0	1/1:6,2:23:16.19:177,16,0	1/1:3,27:30:78.97:988,79,0	1/1:6,34:43:86.26:1140,86,0	1/1:0,9:12:23.56:290,24,0
chr10	22971928	.	T	TA	9177.20	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-15.007;DP=668;FS=0.304;HRun=8;HaplotypeScore=62.2281;InbreedingCoeff=0.9940;MQ=71.67;MQ0=0;MQRankSum=2.062;QD=27.39;ReadPosRankSum=3.325;VQSLOD=5.3042;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:65.89:0,66,579	0/0:10,0:10:30.02:0,30,274	0/0:12,0:11:12.69:0,13,113	0/0:12,0:11:14.97:0,15,130	1/1:9,25:34:90.20:1009,90,0	1/1:3,30:34:75.22:865,75,0	1/1:3,17:20:45.13:519,45,0	0/0:35,0:35:95.97:0,96,851	1/1:1,15:16:39.12:450,39,0	1/1:3,27:30:81.24:932,81,0	1/1:7,19:26:38.66:677,39,0	1/1:4,19:23:51.14:578,51,0	1/1:1,30:31:81.24:934,81,0	1/1:3,22:25:66.09:741,66,0	0/0:22,0:22:62.99:0,63,562	0/0:16,0:16:48.03:0,48,439	0/0:27,0:27:74.92:0,75,665	0/0:28,0:27:63.02:0,63,576	0/0:18,0:18:41.83:0,42,365	0/0:28,0:28:80.53:0,81,720	0/0:14,0:14:36.01:0,36,326	1/1:3,22:25:60.09:675,60,0	1/1:7,19:27:56.71:620,57,0	1/1:2,17:17:45.13:519,45,0	1/1:4,21:25:57.17:658,57,0	0/0:25,0:25:75.01:0,75,677	0/0:38,0:38:97.96:0,98,852	0/0:19,0:19:48.02:0,48,439
chr10	22973571	.	CT	C	6684.39	PASS	AB=0.952;AC=30;AF=0.536;AN=56;BaseQRankSum=11.714;DP=590;FS=0.000;HRun=9;HaplotypeScore=104.4769;InbreedingCoeff=0.8687;MQ=84.79;MQ0=0;MQRankSum=-2.080;QD=19.10;ReadPosRankSum=4.058;VQSLOD=4.5409;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,19:27:31.29:537,31,0	0/0:8,0:8:18.05:0,18,208	0/0:22,1:22:17.55:0,18,401	0/0:24,0:24:50.59:0,51,456	1/1:7,16:23:57:513,57,0	1/1:4,18:22:56.83:498,57,0	1/1:3,15:18:27.01:247,27,0	0/0:29,1:31:41.85:0,42,710	1/1:7,23:30:72.02:653,72,0	1/1:3,23:26:71.45:627,71,0	1/1:7,12:19:47.48:411,47,0	1/1:0,18:18:53.95:482,54,0	1/1:7,13:20:46.79:382,47,0	1/1:0,23:24:57.03:520,57,0	0/0:16,0:16:19.64:0,20,200	0/1:21,0:21:13.34:13,0,188	0/0:26,0:26:66.13:0,66,737	0/0:12,0:12:30.09:0,30,347	0/0:23,0:24:62.99:0,63,668	0/0:13,0:14:41.94:0,42,442	0/0:13,0:13:30.08:0,30,337	1/1:7,9:16:38.40:320,38,0	1/1:2,17:20:49.23:411,49,0	1/1:1,21:22:59.69:532,60,0	1/1:9,16:25:62.47:532,62,0	0/1:17,2:19:6.77:7,0,409	0/0:36,0:36:99:0,99,1073	0/0:13,0:13:39.08:0,39,428
chr10	22973662	.	GT	G	20083.16	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=6.808;DP=543;FS=12.248;HRun=1;HaplotypeScore=135.5966;InbreedingCoeff=0.9475;MQ=89.37;MQ0=0;MQRankSum=-10.991;QD=40.41;ReadPosRankSum=5.617;VQSLOD=2.7021;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,21:21:63.21:881,63,0	1/1:0,8:8:24.08:335,24,0	0/0:20,0:20:57:0,57,795	0/0:26,0:26:75.21:0,75,1100	1/1:1,22:23:63.21:855,63,0	1/1:0,19:19:57.19:791,57,0	1/1:0,19:19:57.19:797,57,0	1/1:0,25:25:75.15:986,75,0	1/1:2,18:20:57.17:772,57,0	1/1:0,20:20:60.19:821,60,0	1/1:1,20:21:60.20:824,60,0	1/1:0,21:21:63.21:875,63,0	1/1:0,18:18:54.18:749,54,0	1/1:0,16:16:48.16:671,48,0	1/1:0,24:24:69.23:953,69,0	1/1:0,25:25:75.25:1048,75,0	1/1:0,28:28:75.25:1048,75,0	1/1:1,14:15:39.60:546,40,0	1/1:0,13:13:39.13:545,39,0	1/1:1,28:29:87.27:1178,87,0	1/1:0,20:20:60.20:839,60,0	1/1:0,19:19:57.19:797,57,0	1/1:1,15:16:45.14:608,45,0	1/1:1,14:15:42.14:580,42,0	1/1:0,24:24:72.24:993,72,0	1/1:0,19:19:57.19:797,57,0	1/1:0,17:17:51.17:707,51,0	1/1:0,2:2:6.02:84,6,0
chr10	22973738	.	TTG	T	7764.93	PASS	AB=1.000;AC=49;AF=0.875;AN=56;BaseQRankSum=6.206;DP=538;FS=12.553;HRun=0;HaplotypeScore=253.6481;InbreedingCoeff=0.4097;MQ=45.77;MQ0=3;MQRankSum=-5.676;QD=16.52;ReadPosRankSum=6.819;VQSLOD=3.2076;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:8,0:8:13.24:54,0,13	1/1:11,0:11:24.02:231,24,0	0/0:38,0:28:72.17:0,72,1027	0/0:30,0:21:42.75:0,43,611	1/1:27,0:27:14.78:191,15,0	1/1:18,0:18:20.93:195,21,0	1/1:14,0:13:2.36:74,2,0	1/1:7,16:23:68.43:798,68,0	1/1:19,0:19:30.63:302,31,0	1/1:13,0:13:30.30:187,30,0	1/1:19,0:19:39.38:215,39,0	1/1:17,1:18:38.82:271,39,0	1/1:12,0:12:30.46:190,30,0	1/1:24,0:24:47.05:294,47,0	1/1:21,0:21:19.28:246,19,0	1/1:19,0:19:3.65:147,4,0	1/1:20,0:19:32.61:287,33,0	0/1:14,0:14:8.13:169,0,8	1/1:18,0:16:36.39:338,36,0	1/1:29,0:29:71.43:677,71,0	1/1:9,0:9:14.01:105,14,0	1/1:19,0:19:0.29:123,0,0	0/1:20,0:20:13.53:102,0,14	1/1:11,0:11:16.57:99,17,0	1/1:28,0:28:39.40:328,39,0	1/1:7,14:21:60:744,60,0	1/1:1,29:30:90.27:1211,90,0	1/1:1,4:5:14.92:188,15,0
chr10	22973739	.	TG	T	8090.20	PASS	AB=0.636;AC=51;AF=0.911;AN=56;BaseQRankSum=8.762;DP=529;FS=9.906;HRun=1;HaplotypeScore=239.9819;InbreedingCoeff=0.6552;MQ=44.45;MQ0=3;MQRankSum=-7.551;QD=17.55;ReadPosRankSum=6.499;VQSLOD=3.7749;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:3,4:7:26.14:41,0,26	1/1:3,7:10:23.38:148,23,0	0/0:38,0:28:72.19:0,72,914	0/0:30,0:21:49.50:0,50,544	1/1:7,19:27:38.57:525,39,0	1/1:3,15:18:36.80:387,37,0	1/1:2,11:12:13.38:236,13,0	1/1:23,0:23:17.27:167,17,0	1/1:7,11:19:52.19:393,52,0	1/1:2,10:12:35.97:320,36,0	1/1:2,16:18:47.51:468,48,0	1/1:5,13:18:47.60:432,48,0	1/1:1,11:12:32.64:308,33,0	1/1:9,15:24:57.37:538,57,0	1/1:6,15:21:37.62:437,38,0	1/1:6,14:20:37.64:458,38,0	1/1:11,7:17:32.91:186,33,0	1/1:7,7:14:7.65:110,8,0	1/1:11,6:16:33.44:194,33,0	1/1:8,20:28:69.73:443,70,0	1/1:6,3:9:16.93:111,17,0	1/1:9,10:19:13.95:325,14,0	1/1:6,14:20:12.58:369,13,0	1/1:1,9:10:10.40:131,10,0	1/1:7,21:28:58.94:672,59,0	1/1:18,2:20:35.90:228,36,0	1/1:31,0:31:83.94:416,84,0	1/1:5,0:5:2.09:46,2,0
chr10	22973742	.	TG	T	7215.79	PASS	AB=0.851;AC=44;AF=0.786;AN=56;BaseQRankSum=6.100;DP=507;FS=3.402;HRun=1;HaplotypeScore=235.0261;InbreedingCoeff=0.2123;MQ=41.11;MQ0=3;MQRankSum=-4.118;QD=16.04;ReadPosRankSum=5.536;VQSLOD=5.0739;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:3,4:7:17.32:17,0,59	1/1:1,7:9:21.32:89,21,0	0/0:32,0:23:68.44:0,68,994	0/0:25,0:18:41.37:0,41,543	1/1:26,0:26:41.26:511,41,0	1/1:18,1:19:44.49:422,44,0	1/1:14,0:13:15.81:238,16,0	0/1:20,0:20:99:102,0,191	1/1:8,11:19:51.76:387,52,0	1/1:12,0:12:35.97:323,36,0	1/1:21,0:21:54.88:532,55,0	1/1:15,1:16:47.84:431,48,0	1/1:10,1:11:32.92:305,33,0	1/1:19,0:19:42.41:430,42,0	1/1:19,1:20:44.52:456,45,0	1/1:19,0:19:37.85:469,38,0	1/1:10,7:16:29.89:141,30,0	0/1:4,10:14:52.48:166,0,52	1/1:9,7:15:32.21:198,32,0	1/1:7,20:27:52.65:234,53,0	0/1:3,3:6:0.48:15,0,0	1/1:17,1:18:22.07:330,22,0	1/1:22,1:23:20.60:402,21,0	0/1:10,0:10:0.20:137,0,0	1/1:27,1:28:63.30:671,63,0	0/1:21,1:22:54.84:55,0,123	0/1:30,1:31:11.39:114,0,11	0/1:6,0:6:30.94:41,0,31
chr10	22973747	.	TTCTTGC	T	20624.39	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=6.661;DP=496;FS=10.451;HRun=0;HaplotypeScore=230.9824;InbreedingCoeff=0.9012;MQ=42.25;MQ0=3;MQRankSum=-5.445;QD=46.35;ReadPosRankSum=4.099;VQSLOD=3.4726;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,4:9:3.59:151,4,0	1/1:2,7:9:24.08:460,24,0	0/0:29,0:24:66.09:0,66,1576	0/0:22,0:16:19.84:0,20,788	1/1:9,15:24:62.47:900,62,0	1/1:7,12:19:51.17:927,51,0	1/1:7,5:11:32.02:402,32,0	1/1:6,15:21:58.10:1142,58,0	1/1:18,0:18:51.15:845,51,0	1/1:2,9:11:33.07:600,33,0	1/1:9,13:22:62.78:1031,63,0	1/1:6,12:18:53.62:850,54,0	1/1:9,8:17:50.92:755,51,0	1/1:6,13:19:48.16:942,48,0	1/1:6,14:20:56.69:984,57,0	1/1:8,11:19:53.72:797,54,0	1/1:11,7:17:41.91:614,42,0	1/1:10,5:15:32.92:509,33,0	1/1:10,5:14:33.08:528,33,0	1/1:6,18:24:66.69:1265,67,0	1/1:5,1:6:11.93:172,12,0	1/1:8,8:16:44.45:726,44,0	1/1:12,10:22:53.66:773,54,0	1/1:3,7:10:26.12:431,26,0	1/1:6,18:24:65.76:1194,66,0	1/1:7,14:21:60.68:1227,61,0	1/1:6,24:30:90.31:2030,90,0	1/1:2,4:6:18.03:370,18,0
chr10	22973748	.	TCTTGC	T	8305.95	PASS	AB=0.962;AC=49;AF=0.875;AN=56;BaseQRankSum=11.020;DP=471;FS=14.823;HRun=0;HaplotypeScore=251.9689;InbreedingCoeff=0.1617;MQ=42.80;MQ0=3;MQRankSum=-5.180;QD=18.71;ReadPosRankSum=9.222;VQSLOD=2.1438;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:8,0:8:12.18:12,0,82	1/1:9,0:9:23.60:209,24,0	0/0:26,0:23:66:0,66,1712	0/1:19,0:16:41.41:41,0,801	0/1:24,0:24:0.80:277,0,1	1/1:16,0:17:46.78:361,47,0	0/1:12,0:11:29.24:101,0,29	1/1:19,0:19:38.59:446,39,0	1/1:6,11:18:50.21:810,50,0	1/1:12,0:12:11.48:216,11,0	1/1:21,0:21:46.52:411,47,0	1/1:18,0:18:13.64:328,14,0	0/1:15,1:17:28.42:269,0,28	1/1:15,1:17:47.46:420,47,0	1/1:18,0:18:27.40:375,27,0	1/1:19,0:19:29.86:240,30,0	1/1:16,0:15:10.84:191,11,0	1/1:11,0:11:14.21:152,14,0	1/1:15,0:13:7.80:137,8,0	1/1:22,0:22:63.65:554,64,0	1/1:5,0:5:3.21:45,3,0	1/1:14,1:15:18.93:263,19,0	1/1:20,0:20:13.63:209,14,0	1/1:10,0:10:21.23:160,21,0	1/1:22,0:22:46.07:456,46,0	1/1:21,0:21:55:518,55,0	1/1:29,1:30:84:940,84,0	1/1:6,0:6:3.73:163,4,0
chr10	22973751	.	TGCTG	T	1159.11	PASS	AB=0.993;AC=23;AF=0.411;AN=56;BaseQRankSum=12.729;DP=480;FS=5.937;HRun=0;HaplotypeScore=268.6035;InbreedingCoeff=-0.1164;MQ=43.52;MQ0=2;MQRankSum=-6.220;QD=3.53;ReadPosRankSum=13.145;VQSLOD=-0.1503;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:5.50:0,5,162	1/1:9,0:9:9.67:38,10,0	0/0:27,0:23:65.70:0,66,1574	0/0:21,0:16:10.95:0,11,687	0/0:23,0:23:5.24:0,5,170	0/1:18,0:18:12.37:12,0,76	0/0:10,0:10:9.69:0,10,127	0/1:22,0:22:95.35:95,0,135	1/1:15,3:18:43.13:261,43,0	0/0:12,0:12:6.51:0,7,89	0/1:22,0:22:11.82:12,0,107	0/1:18,0:18:7.35:7,0,114	0/1:16,0:17:33.30:33,0,174	0/1:18,0:18:39.54:71,0,40	0/1:18,1:19:19.40:19,0,37	0/0:19,0:19:13.47:0,13,146	0/1:17,0:16:23.17:23,0,109	0/1:12,0:12:15.79:16,0,105	0/1:14,0:13:12.39:12,0,84	1/1:22,0:22:29.96:143,30,0	0/1:4,0:4:2.11:2,0,13	0/1:16,0:16:7.46:7,0,112	0/0:20,0:20:4.43:0,4,128	0/0:11,0:11:3.99:0,4,70	0/1:23,0:23:0.94:1,0,89	0/1:21,0:21:44.33:134,0,44	1/1:30,0:30:42.67:374,43,0	0/1:8,0:8:52.35:64,0,52
chr10	22974283	.	GAA	G	1064.01	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=8.960;DP=318;FS=1.554;HRun=10;HaplotypeScore=57.6609;InbreedingCoeff=0.8089;MQ=51.00;MQ0=9;MQRankSum=-7.165;QD=10.33;ReadPosRankSum=1.686;VQSLOD=0.7107;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:44.94:0,45,553	1/1:1,0:1:2.90:16,3,0	0/0:21,0:4:6.02:0,6,79	0/0:26,0:10:8.26:0,8,155	0/0:21,0:21:42.57:0,43,619	0/0:15,0:14:42.13:0,42,639	0/0:5,0:4:9.03:0,9,143	1/1:7,16:17:29.85:257,30,0	0/0:10,0:10:21.07:0,21,333	0/0:12,0:12:33.11:0,33,521	0/0:13,0:13:24.04:0,24,350	0/0:4,0:4:6.02:0,6,95	0/0:5,0:5:12.04:0,12,190	0/0:13,0:13:27.01:0,27,373	0/0:6,0:6:9.03:0,9,143	0/0:4,0:4:9.03:0,9,133	1/1:7,6:13:14.78:118,15,0	1/1:4,6:10:14.97:134,15,0	1/1:9,5:12:17.91:174,18,0	1/1:4,2:6:5.87:42,6,0	1/1:6,3:9:8.99:81,9,0	0/0:2,0:2:3.01:0,3,48	0/0:8,0:9:17:0,17,185	0/0:7,0:7:9.03:0,9,131	0/0:17,0:17:39.08:0,39,571	1/1:9,4:13:23.83:196,24,0	1/1:5,8:13:24.01:218,24,0	1/1:0,1:1:3:28,3,0
chr10	22974290	.	A	AAT	694.64	PASS	AB=0.894;AC=15;AF=0.268;AN=56;BaseQRankSum=8.598;DP=317;FS=9.399;HRun=0;HaplotypeScore=58.1024;InbreedingCoeff=0.3447;MQ=52.68;MQ0=12;MQRankSum=-7.295;QD=6.55;ReadPosRankSum=1.776;VQSLOD=1.2452;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:47.93:0,48,658	1/1:0,1:1:3.01:50,3,0	0/0:32,0:7:14.91:0,15,138	0/0:35,0:13:12.49:0,12,200	0/0:17,0:17:46.29:0,46,586	0/0:15,0:15:45.12:0,45,598	0/0:6,0:6:18:0,18,204	0/1:29,4:27:99:140,0,109	0/0:7,0:7:21.07:0,21,303	0/0:13,0:13:39.12:0,39,532	0/0:9,0:9:24.04:0,24,322	0/0:3,0:3:8.99:0,9,107	0/0:5,0:5:12.04:0,12,174	0/0:10,0:10:27:0,27,343	0/0:7,0:6:12.03:0,12,155	0/0:3,0:3:9.02:0,9,109	0/1:10,4:14:13.95:122,0,14	0/1:11,0:11:5.71:46,0,6	0/1:12,0:14:32.17:160,0,32	1/1:3,1:4:8.95:93,9,0	1/1:4,0:3:2.24:6,2,0	0/0:1,0:1:3.01:0,3,43	0/0:9,0:9:20.46:0,20,204	0/0:4,0:4:9.03:0,9,129	0/0:14,0:14:39.08:0,39,524	1/1:9,2:11:1.66:180,2,0	0/1:11,0:11:8.59:23,0,9	1/1:1,0:1:3:29,3,0
chr10	22974294	.	TA	T	2564.65	PASS	AC=20;AF=0.370;AN=54;BaseQRankSum=8.141;DP=310;FS=0.000;HRun=10;HaplotypeScore=42.9644;InbreedingCoeff=0.8581;MQ=56.98;MQ0=12;MQRankSum=-5.037;QD=21.92;ReadPosRankSum=0.237;VQSLOD=4.1146;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,17:17:42.13:501,42,0	./.	0/0:34,0:9:19.97:0,20,200	0/0:37,0:13:2.80:0,3,202	0/0:15,0:15:36.12:0,36,486	0/0:14,0:14:39.13:0,39,545	0/0:6,0:6:18.06:0,18,241	1/1:5,29:28:68.65:729,69,0	0/0:7,0:7:21.07:0,21,279	0/0:13,0:13:36.08:0,36,472	0/0:8,0:8:18.06:0,18,252	0/0:3,0:3:9.03:0,9,112	0/0:5,0:5:12.03:0,12,148	0/0:10,0:10:21.07:0,21,294	0/0:5,0:4:12.02:0,12,149	0/0:4,0:4:6.02:0,6,84	1/1:8,5:13:23.32:216,23,0	1/1:0,12:12:18.04:191,18,0	1/1:6,5:10:30.06:316,30,0	1/1:1,2:3:5.91:46,6,0	1/1:1,3:3:9.02:88,9,0	0/0:1,0:1:3.01:0,3,42	0/0:9,0:9:12.04:0,12,156	0/0:4,0:4:6.02:0,6,84	0/0:17,0:17:45.10:0,45,580	1/1:2,7:9:26.40:241,26,0	1/1:2,8:10:30.06:309,30,0	1/1:3,1:4:12.03:132,12,0
chr10	22974430	.	ATAT	A	74.80	PASS	AB=0.955;AC=7;AF=0.125;AN=56;BaseQRankSum=2.220;DP=349;FS=39.470;HRun=0;HaplotypeScore=116.4804;InbreedingCoeff=-0.0017;MQ=65.83;MQ0=2;MQRankSum=-4.403;QD=0.97;ReadPosRankSum=-1.863;VQSLOD=0.0279;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,1:11:0.47:1,0,0	0/0:6,0:6:12.04:0,12,261	0/0:20,0:13:39.01:0,39,581	0/0:19,0:12:32.21:0,32,645	0/0:13,0:13:26.96:0,27,541	0/0:21,0:20:45.13:0,45,1039	0/0:13,0:12:5.88:0,6,521	0/1:27,1:22:76:76,0,1132	0/0:13,0:13:32.69:0,33,720	0/0:10,0:10:30.10:0,30,733	0/0:16,0:16:41.10:0,41,758	0/0:6,0:6:18.03:0,18,382	0/0:11,0:11:33.11:0,33,799	0/0:9,0:9:27.09:0,27,654	0/0:12,0:12:24.06:0,24,425	0/0:13,0:13:26.93:0,27,452	0/0:15,1:16:17.42:0,17,304	0/0:4,0:4:9.03:0,9,172	0/1:9,0:8:23.65:24,0,222	0/1:9,1:10:40.05:40,0,64	0/1:8,1:8:37.65:38,0,39	0/0:15,0:15:39.08:0,39,800	0/0:11,0:11:33.11:0,33,802	0/0:9,0:9:15.42:0,15,316	0/0:13,0:13:39.10:0,39,858	0/1:10,0:10:12.35:12,0,439	0/0:17,0:17:30.10:0,30,679	0/0:5,0:5:15.05:0,15,332
chr10	22974433	.	T	TCACACACACACACACA	7245.51	PASS	AB=0.917;AC=24;AF=0.429;AN=56;BaseQRankSum=-0.055;DP=350;FS=44.061;HRun=0;HaplotypeScore=180.2438;InbreedingCoeff=0.5946;MQ=61.94;MQ0=3;MQRankSum=-6.255;QD=43.39;ReadPosRankSum=-2.126;VQSLOD=2.5404;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:12:5.94:375,6,0	1/1:5,0:5:2.99:24,3,0	0/0:21,0:13:27.45:0,27,573	0/0:19,0:11:25.72:0,26,893	0/0:12,0:12:12.03:0,12,287	0/0:23,0:22:19.17:0,19,929	0/1:13,0:12:19.54:20,0,614	1/1:33,0:27:63.20:2221,63,0	0/1:11,0:11:2.77:3,0,306	0/0:10,0:10:24.08:0,24,686	0/0:14,0:14:23.80:0,24,660	0/0:6,0:6:9.03:0,9,237	0/0:11,0:11:30.09:0,30,817	0/0:10,0:10:10.66:0,11,663	0/0:11,0:11:16.28:0,16,470	0/1:11,0:11:2.59:3,0,356	1/1:14,0:15:15.05:619,15,0	1/1:2,0:4:3.01:206,3,0	1/1:9,1:9:14.86:1039,15,0	1/1:11,1:12:3.01:218,3,0	1/1:7,0:6:3.01:211,3,0	0/0:13,0:13:27.05:0,27,838	0/0:11,0:11:30.10:0,30,894	0/0:9,0:9:12.04:0,12,389	0/0:13,0:13:30.09:0,30,848	0/1:5,4:10:9.52:1413,0,10	1/1:9,7:17:12.04:564,12,0	1/1:4,0:5:6.02:330,6,0
chr10	22974440	.	C	CAGAGAG	6715.84	PASS	AB=0.895;AC=49;AF=0.907;AN=54;BaseQRankSum=-0.551;DP=390;FS=12.185;HRun=0;HaplotypeScore=153.0233;InbreedingCoeff=0.2884;MQ=57.67;MQ0=4;MQRankSum=-0.869;QD=19.75;ReadPosRankSum=2.308;VQSLOD=4.1184;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:20:1.11:4,1,0	./.	0/0:19,0:12:8.99:0,9,167	0/0:25,0:14:1.01:0,1,111	1/1:7,3:10:8.92:281,9,0	1/1:15,6:20:21.07:597,21,0	1/1:10,5:14:3.26:378,3,0	1/1:38,0:31:35.36:792,35,0	1/1:3,4:9:18.04:446,18,0	1/1:8,3:11:19.62:458,20,0	1/1:12,4:17:12.02:263,12,0	1/1:4,3:7:9.03:267,9,0	1/1:10,1:11:21.07:489,21,0	1/1:9,1:11:18.03:402,18,0	1/1:14,0:12:6.01:90,6,0	1/1:15,0:15:3:78,3,0	0/1:15,1:17:10.79:99,0,11	1/1:4,0:4:2.98:21,3,0	1/1:11,1:10:12.02:235,12,0	1/1:12,0:13:3.01:97,3,0	1/1:7,0:7:3.01:87,3,0	1/1:13,0:13:9:119,9,0	1/1:8,2:11:17.28:363,17,0	1/1:10,2:13:3.01:39,3,0	1/1:10,5:15:21.07:557,21,0	1/1:12,1:13:24.02:364,24,0	1/1:17,0:17:9.02:165,9,0	1/1:3,0:3:3:26,3,0
chr10	22974486	.	A	AT	10122.36	PASS	AB=1.000;AC=49;AF=0.875;AN=56;BaseQRankSum=-2.988;DP=393;FS=2.163;HRun=5;HaplotypeScore=81.6709;InbreedingCoeff=0.5608;MQ=57.62;MQ0=0;MQRankSum=-0.761;QD=26.92;ReadPosRankSum=2.264;VQSLOD=4.9409;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:24:1.12:194,0,1	1/1:0,7:7:21.07:276,21,0	0/0:4,0:4:5.93:0,6,41	0/0:12,0:8:17.80:0,18,155	1/1:2,7:9:23.97:268,24,0	1/1:4,9:12:35.21:375,35,0	1/1:4,10:13:32.95:390,33,0	1/1:1,29:29:84.20:1029,84,0	1/1:2,10:12:35.09:408,35,0	1/1:3,15:18:48.16:631,48,0	1/1:4,9:13:32.84:382,33,0	1/1:3,14:17:44.56:535,45,0	1/1:2,8:10:26.45:323,26,0	1/1:1,18:19:51.17:670,51,0	0/1:23,0:22:2.55:119,0,3	0/1:21,0:21:4.51:127,0,5	1/1:2,9:11:21.03:255,21,0	1/1:1,6:7:18.06:237,18,0	1/1:5,13:18:39.05:477,39,0	1/1:2,14:16:39.13:512,39,0	1/1:0,7:7:21.03:256,21,0	1/1:1,10:11:30.10:395,30,0	1/1:2,4:6:14.94:171,15,0	1/1:1,13:14:23.81:287,24,0	1/1:1,14:15:41.89:486,42,0	1/1:1,17:18:44.96:570,45,0	1/1:1,18:18:45.15:592,45,0	1/1:0,4:4:12.04:158,12,0
chr10	22974490	.	T	TA	3925.79	PASS	AB=1.000;AC=40;AF=0.714;AN=56;BaseQRankSum=-0.830;DP=399;FS=2.664;HRun=0;HaplotypeScore=99.1759;InbreedingCoeff=0.1398;MQ=58.45;MQ0=0;MQRankSum=2.072;QD=10.79;ReadPosRankSum=10.630;VQSLOD=2.8375;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:22.54:0,23,185	1/1:7,0:7:19.08:88,19,0	0/0:4,0:4:8.84:0,9,63	0/0:8,0:6:18:0,18,212	0/1:10,0:10:7.41:49,0,7	0/1:15,0:14:28.71:89,0,29	0/1:14,0:13:0.64:93,0,1	1/1:32,0:30:8.97:204,9,0	1/1:12,0:12:27.80:139,28,0	0/1:17,0:17:4.33:138,0,4	0/1:15,0:15:42.12:97,0,42	1/1:17,0:17:23.53:181,24,0	0/1:11,0:11:28.89:86,0,29	0/1:21,0:21:22.23:156,0,22	1/1:3,22:25:51.11:649,51,0	1/1:3,18:21:47.84:606,48,0	1/1:10,0:10:16.98:114,17,0	1/1:6,0:6:16.77:83,17,0	0/1:18,0:18:93.51:102,0,94	0/1:18,0:18:51.96:140,0,52	1/1:7,0:7:17:91,17,0	1/1:10,0:10:27.36:128,27,0	1/1:7,0:7:13.65:63,14,0	1/1:13,0:13:16.50:106,17,0	0/1:16,0:16:15.74:119,0,16	1/1:19,0:19:37.70:181,38,0	1/1:19,0:18:17.91:174,18,0	1/1:4,0:4:11.03:51,11,0
chr10	22974491	.	T	TA	4857.02	PASS	AB=0.991;AC=43;AF=0.768;AN=56;BaseQRankSum=5.055;DP=400;FS=4.860;HRun=7;HaplotypeScore=94.7088;InbreedingCoeff=0.0023;MQ=58.89;MQ0=0;MQRankSum=-2.464;QD=12.39;ReadPosRankSum=8.688;VQSLOD=2.7973;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,19:22:51.16:613,51,0	1/1:7,0:7:19.08:88,19,0	0/1:4,0:4:0.80:1,0,19	0/0:8,0:6:11.93:0,12,101	0/1:8,1:9:2.86:83,0,3	0/1:15,0:14:3.23:93,0,3	1/1:13,0:12:4.51:105,5,0	1/1:34,0:32:16.67:230,17,0	1/1:13,0:13:28.41:155,28,0	0/1:17,0:17:0.60:145,0,1	0/1:16,0:16:40.02:113,0,40	1/1:16,0:16:36.40:199,36,0	0/1:11,0:11:19.09:95,0,19	0/1:23,0:23:18.23:176,0,18	1/1:26,0:26:57.17:681,57,0	1/1:21,0:21:54.17:646,54,0	1/1:10,0:10:18.57:133,19,0	1/1:7,0:7:17.06:89,17,0	0/1:17,0:17:58.53:110,0,59	0/1:17,0:17:29.16:142,0,29	1/1:7,0:7:18.19:104,18,0	1/1:10,0:10:27.61:134,28,0	0/1:6,0:6:9.31:40,0,9	1/1:13,0:13:20.08:126,20,0	0/1:17,0:17:8.52:119,0,9	1/1:18,0:18:38.51:189,39,0	1/1:19,0:18:22.62:196,23,0	1/1:4,0:4:11.13:53,11,0
chr10	22975043	.	G	GA	8365.54	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-16.733;DP=706;FS=1.692;HRun=6;HaplotypeScore=69.2510;InbreedingCoeff=0.9825;MQ=69.36;MQ0=0;MQRankSum=-2.756;QD=33.07;ReadPosRankSum=-1.466;VQSLOD=4.5332;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,22:24:63.20:793,63,0	1/1:1,12:13:36.10:439,36,0	0/0:14,0:14:29.58:0,30,249	0/0:5,0:5:5.99:0,6,52	0/0:35,0:35:96.22:0,96,979	0/0:30,0:30:87.20:0,87,887	0/0:20,0:20:54.12:0,54,551	1/1:2,29:31:87.24:1065,87,0	0/0:25,0:25:69.13:0,69,691	0/0:39,0:39:99:0,102,1032	0/0:25,0:25:69.16:0,69,703	0/0:25,0:25:66.13:0,66,666	0/0:31,0:31:67.04:0,67,775	0/0:29,0:29:84.19:0,84,857	0/0:37,0:37:99:0,111,1125	0/0:29,0:29:81.18:0,81,826	1/1:0,27:27:78.25:981,78,0	1/1:0,6:6:15.05:189,15,0	1/1:2,15:17:45.14:553,45,0	1/1:4,28:32:81.22:1001,81,0	1/1:0,20:20:57.18:717,57,0	0/0:32,0:32:84.18:0,84,856	0/0:25,0:25:66.15:0,66,673	0/0:26,0:26:75.17:0,75,765	0/0:26,0:26:66.11:0,66,660	1/1:2,24:26:72.22:892,72,0	1/1:4,43:47:99:1358,108,0	1/1:0,10:10:30.10:377,30,0
chr10	22976707	.	TGGA	T	6138.77	PASS	AB=0.551;AC=21;AF=0.375;AN=56;BaseQRankSum=17.599;DP=588;FS=0.333;HRun=0;HaplotypeScore=150.8949;InbreedingCoeff=0.9124;MQ=83.18;MQ0=0;MQRankSum=-17.391;QD=33.36;ReadPosRankSum=-1.946;VQSLOD=4.9062;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,30:30:90.25:1051,90,0	1/1:0,11:11:33.09:395,33,0	0/0:21,0:21:58.73:0,59,1118	0/0:21,0:21:60.16:0,60,1224	0/0:27,0:27:78.27:0,78,1843	0/0:25,0:25:75.26:0,75,1772	0/0:23,0:23:69.23:0,69,1586	1/1:3,18:21:54.18:705,54,0	0/0:23,0:23:69.24:0,69,1629	0/0:26,0:26:78.27:0,78,1849	0/0:25,0:25:75.26:0,75,1769	0/0:20,0:20:57.18:0,57,1302	0/0:18,0:18:51.18:0,51,1191	0/0:20,0:20:60.21:0,60,1419	0/0:35,0:35:99:0,105,2482	0/0:30,0:30:87.30:0,87,2057	1/1:1,10:11:18.05:209,18,0	1/1:1,3:4:9.03:133,9,0	1/1:0,11:11:33.10:449,33,0	1/1:0,23:23:69.21:873,69,0	1/1:0,12:12:24.07:283,24,0	0/0:19,0:19:57.20:0,57,1347	0/0:30,0:30:90.31:0,90,2117	0/0:24,0:24:72.25:0,72,1703	0/0:17,0:17:48.16:0,48,1138	0/1:5,22:27:99:727,0,276	1/1:0,28:28:84.26:1073,84,0	1/1:1,5:6:18.06:241,18,0
chr10	22976712	.	T	TC	5327.48	PASS	AB=0.566;AC=21;AF=0.375;AN=56;BaseQRankSum=17.618;DP=618;FS=1.420;HRun=1;HaplotypeScore=141.0448;InbreedingCoeff=0.9164;MQ=82.90;MQ0=0;MQRankSum=-16.145;QD=26.24;ReadPosRankSum=-2.568;VQSLOD=4.0761;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,30:31:90:815,90,0	1/1:0,11:11:33:308,33,0	0/0:22,0:22:57.14:0,57,694	0/0:21,1:22:27.05:0,27,664	0/0:26,0:26:78.25:0,78,1011	0/0:26,0:26:75.23:0,75,958	0/0:24,0:24:72.22:0,72,919	1/1:8,18:26:78.16:824,78,0	0/0:27,0:27:78.24:0,78,998	0/0:27,0:27:78.25:0,78,1013	0/0:27,0:27:78.25:0,78,1012	0/0:19,0:19:57.19:0,57,740	0/0:18,0:18:54.18:0,54,701	0/0:21,0:21:63.20:0,63,818	0/0:36,0:36:99:0,105,1349	0/0:31,0:31:90.28:0,90,1155	1/1:6,10:16:29.97:259,30,0	1/1:2,3:5:12:132,12,0	1/1:0,11:11:33.01:360,33,0	1/1:2,23:25:69.07:689,69,0	1/1:1,12:13:27.03:257,27,0	0/0:19,0:19:54.18:0,54,701	0/0:30,0:30:90.29:0,90,1168	0/0:25,0:25:72.19:0,72,916	0/0:15,0:15:42.14:0,42,545	0/1:7,23:30:99:651,0,109	1/1:2,28:30:87.12:877,87,0	1/1:0,5:5:15.03:155,15,0
chr10	22979012	.	AT	A	5515.47	PASS	AB=0.561;AC=23;AF=0.411;AN=56;BaseQRankSum=16.890;DP=458;FS=1.198;HRun=4;HaplotypeScore=86.1824;InbreedingCoeff=0.9186;MQ=62.70;MQ0=0;MQRankSum=-12.239;QD=30.14;ReadPosRankSum=0.744;VQSLOD=4.9597;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:39.13:0,39,545	1/1:0,5:5:15.04:175,15,0	0/0:17,0:17:43.08:0,43,564	0/0:15,0:10:27.09:0,27,366	0/0:29,0:29:87.28:0,87,1200	0/0:24,0:24:66.22:0,66,923	0/0:14,0:14:39.09:0,39,495	1/1:3,22:25:69.17:790,69,0	0/0:12,0:12:33.11:0,33,462	0/0:19,0:19:57.19:0,57,785	0/0:17,0:17:48.15:0,48,656	0/0:22,0:22:66.20:0,66,886	0/0:23,0:23:69.21:0,69,934	0/0:8,0:8:24.07:0,24,319	1/1:2,18:20:54.16:629,54,0	1/1:0,15:15:45.13:526,45,0	1/1:1,17:18:45.13:523,45,0	1/1:0,4:4:12.04:140,12,0	1/1:4,11:15:36.10:417,36,0	1/1:3,14:17:42.12:489,42,0	1/1:1,7:8:21.06:244,21,0	0/0:12,0:12:36.12:0,36,504	0/0:15,0:15:42.14:0,42,587	0/0:13,0:13:39.12:0,39,530	0/0:22,0:22:60.18:0,60,809	0/1:5,18:23:23.83:572,0,24	1/1:0,19:19:57.17:663,57,0	1/1:4,10:14:30.09:349,30,0
chr10	22979041	.	CAAAT	C	5385.72	PASS	AB=0.895;AC=26;AF=0.464;AN=56;BaseQRankSum=11.984;DP=469;FS=3.681;HRun=0;HaplotypeScore=108.8663;InbreedingCoeff=0.7072;MQ=58.56;MQ0=2;MQRankSum=-9.054;QD=22.53;ReadPosRankSum=-0.854;VQSLOD=4.4190;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:17,1:18:8.59:9,0,748	1/1:2,2:4:6.02:101,6,0	0/1:19,0:15:2.99:3,0,309	0/1:12,0:7:3.82:4,0,172	0/0:35,0:34:93.27:0,93,2107	0/0:24,0:24:57.18:0,57,1345	0/0:13,0:13:36.10:0,36,769	1/1:23,1:24:30.03:359,30,0	0/0:12,0:12:33.08:0,33,673	0/0:19,0:19:45.15:0,45,1113	0/0:19,0:19:48.16:0,48,1161	0/0:17,0:17:42.09:0,42,847	0/0:19,0:19:42.14:0,42,1043	0/0:12,0:12:33.09:0,33,712	1/1:8,9:17:30.09:479,30,0	1/1:3,14:17:39.13:655,39,0	1/1:10,8:18:27.09:447,27,0	1/1:3,1:4:3.01:51,3,0	1/1:6,15:20:45.07:623,45,0	1/1:4,21:25:57:893,57,0	1/1:6,2:8:5.90:69,6,0	0/0:10,0:10:24.07:0,24,548	0/0:17,0:17:48.07:0,48,1029	0/0:11,0:11:21.07:0,21,509	0/0:22,0:22:60.14:0,60,1292	0/1:8,11:19:26.54:636,0,27	1/1:6,13:19:54.14:832,54,0	1/1:11,3:14:15.03:226,15,0
chr10	22979781	.	A	ATTCTCAGT	18112.67	PASS	AB=0.541;AC=23;AF=0.411;AN=56;BaseQRankSum=-4.233;DP=563;FS=10.017;HRun=0;HaplotypeScore=170.4529;InbreedingCoeff=0.9018;MQ=87.09;MQ0=1;MQRankSum=-12.278;QD=87.08;ReadPosRankSum=-2.543;VQSLOD=4.3798;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:77.85:0,78,1955	1/1:2,10:14:30.10:1289,30,0	0/0:30,0:27:54.06:0,54,1213	0/0:29,0:28:48.45:0,48,1369	0/0:30,0:30:75.21:0,75,1853	0/0:24,0:24:45.14:0,45,1110	0/0:17,0:17:42.14:0,42,1138	1/1:16,8:28:63.15:2015,63,0	0/0:11,0:11:27.09:0,27,697	0/0:22,0:22:60.21:0,60,1593	0/0:11,0:11:24.08:0,24,608	0/0:26,0:26:72.23:0,72,1871	0/0:16,0:16:39.13:0,39,1001	0/0:18,0:18:39.61:0,40,1058	1/1:4,21:26:60.21:2579,60,0	0/1:3,15:20:39.62:1584,0,40	1/1:5,12:17:30.10:1220,30,0	1/1:1,3:5:12.04:474,12,0	1/1:12,5:19:45.14:1540,45,0	1/1:7,12:21:45.12:1826,45,0	1/1:1,4:8:12.04:489,12,0	0/0:21,0:21:54.18:0,54,1295	0/0:21,0:21:53.97:0,54,1440	0/0:25,0:25:43.99:0,44,1124	0/0:25,0:25:63.22:0,63,1707	1/1:5,15:22:60.21:2420,60,0	1/1:6,16:24:63.17:2419,63,0	1/1:1,2:3:6.02:258,6,0
chr10	22979810	.	C	CGTGTGTGTGTGTGT	4894.38	PASS	AB=0.657;AC=49;AF=0.980;AN=50;BaseQRankSum=-2.162;DP=616;FS=0.000;HRun=0;HaplotypeScore=263.8960;InbreedingCoeff=0.0365;MQ=56.30;MQ0=13;MQRankSum=0.406;QD=9.01;ReadPosRankSum=1.900;VQSLOD=3.2888;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:29:17.58:321,18,0	1/1:16,0:15:2.94:25,3,0	./.	./.	1/1:32,0:32:2.99:24,3,0	1/1:13,10:33:3.01:200,3,0	1/1:29,0:29:18.49:238,18,0	1/1:21,0:21:31.54:560,32,0	1/1:14,0:14:2.94:18,3,0	1/1:13,0:30:36.01:593,36,0	1/1:11,0:11:6.01:59,6,0	1/1:28,0:28:9.95:118,10,0	1/1:19,0:17:5.56:89,6,0	1/1:10,0:21:4.26:104,4,0	1/1:24,0:24:12:191,12,0	1/1:22,0:22:7.67:113,8,0	1/1:22,0:21:14.80:240,15,0	1/1:8,0:8:11.96:177,12,0	1/1:9,0:8:5.99:195,6,0	1/1:24,0:24:18:283,18,0	1/1:12,0:12:0.51:17,1,0	0/1:11,0:23:0.10:0,0,0	1/1:24,0:23:5.85:48,6,0	1/1:27,0:29:6.49:166,6,0	1/1:14,0:22:3.01:142,3,0	1/1:25,0:24:32.98:772,33,0	1/1:16,0:15:5.97:201,6,0	./.
chr10	22980441	.	AACAC	A	701.41	PASS	AB=0.960;AC=17;AF=0.315;AN=54;BaseQRankSum=3.986;DP=464;FS=0.686;HRun=0;HaplotypeScore=113.4852;InbreedingCoeff=-0.2004;MQ=60.50;MQ0=11;MQRankSum=-2.982;QD=2.89;ReadPosRankSum=-1.580;VQSLOD=1.8133;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:20,0:20:0:0,0,0	0/0:5,0:7:1.90:0,2,50	./.	0/0:26,0:15:3.01:0,3,35	0/1:14,0:14:18.53:19,0,202	0/0:20,0:19:13.88:0,14,180	0/1:14,0:13:35.85:36,0,121	0/1:30,0:31:22.89:109,0,23	0/1:17,0:17:18.81:19,0,139	0/1:26,0:25:99:125,0,124	0/1:21,0:21:49.31:94,0,49	0/0:20,0:18:17.67:0,18,190	0/0:11,0:11:11.90:0,12,153	0/0:11,0:10:8.24:0,8,136	0/1:10,0:12:7.80:8,0,54	0/1:8,0:10:9.84:10,0,65	0/0:30,0:31:24.05:0,24,286	0/0:14,0:16:10.79:0,11,293	0/0:11,0:11:16.65:0,17,150	0/0:7,0:8:3.90:0,4,44	0/0:16,0:15:11.98:0,12,113	0/1:11,0:12:9.06:9,0,143	1/1:12,0:12:0.94:2,1,0	0/0:20,0:21:8.17:0,8,282	0/1:21,0:21:74.09:74,0,119	0/1:11,4:15:36.24:164,0,36	0/1:11,3:14:53.11:100,0,53	1/1:1,2:3:6.02:77,6,0
chr10	22980468	.	ACACACACG	A	1106.79	PASS	AB=0.975;AC=22;AF=0.393;AN=56;BaseQRankSum=2.399;DP=449;FS=1.957;HRun=0;HaplotypeScore=128.2334;InbreedingCoeff=-0.2469;MQ=49.61;MQ0=14;MQRankSum=-3.998;QD=3.50;ReadPosRankSum=3.135;VQSLOD=2.1206;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,17:19:6.02:77,6,0	0/0:7,0:7:4.57:0,5,59	0/0:10,0:2:5.93:0,6,49	0/1:12,0:4:0.91:1,0,12	0/1:19,3:22:99:219,0,171	0/0:23,0:22:8.37:0,8,152	0/1:9,3:11:45.77:46,0,116	0/1:31,0:30:99:136,0,134	0/1:10,0:10:63.04:63,0,132	0/1:20,0:19:25.18:25,0,179	0/1:20,0:20:0.52:1,0,110	0/1:15,0:13:19.20:19,0,147	0/0:10,0:10:11.80:0,12,157	0/0:10,0:9:2.67:0,3,128	0/0:12,0:12:8.51:0,9,78	0/1:10,0:10:3.06:3,0,162	0/0:30,0:29:11.55:0,12,311	0/1:23,0:22:0.13:0,0,330	0/1:15,0:14:24.73:25,0,114	0/0:10,0:9:5.74:0,6,37	0/0:21,0:19:12.02:0,12,143	0/1:11,0:11:99:102,0,142	1/1:11,1:12:3.68:39,4,0	0/1:16,0:16:24.13:24,0,257	0/1:20,2:22:99:195,0,105	0/1:16,0:16:88.62:164,0,89	0/1:18,0:18:65.99:66,0,155	1/1:12,0:12:6:54,6,0
chr10	22980470	.	ACACACG	A	2815.26	PASS	AB=0.952;AC=40;AF=0.714;AN=56;BaseQRankSum=-4.755;DP=442;FS=2.151;HRun=0;HaplotypeScore=111.3981;InbreedingCoeff=0.4408;MQ=49.78;MQ0=14;MQRankSum=-0.117;QD=7.35;ReadPosRankSum=-1.713;VQSLOD=1.6590;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:19:5.88:36,6,0	0/0:7,0:7:5.69:0,6,69	0/0:11,0:3:8.93:0,9,74	0/1:11,0:3:0.91:1,0,12	1/1:21,1:22:38.47:436,38,0	1/1:8,14:21:12.04:151,12,0	1/1:9,1:10:8.88:73,9,0	1/1:30,0:29:29.96:160,30,0	1/1:10,0:10:15.02:227,15,0	1/1:20,0:19:28.72:190,29,0	1/1:20,0:20:5.54:22,6,0	0/1:9,6:13:0:0,0,0	1/1:5,4:9:1.87:34,2,0	1/1:5,5:9:3.01:34,3,0	0/0:12,0:12:8.89:0,9,75	0/1:10,0:10:3.98:4,0,114	0/1:30,0:29:0.13:0,0,101	0/1:23,0:22:19.16:19,0,193	0/1:15,0:14:4.59:5,0,24	0/0:9,0:8:2.68:0,3,11	0/0:20,0:18:3.01:0,3,43	1/1:6,5:11:11.99:133,12,0	1/1:2,10:12:11.45:120,11,0	1/1:10,6:16:6.02:100,6,0	1/1:6,16:22:30.03:480,30,0	1/1:16,0:16:27.70:366,28,0	1/1:17,0:17:14.27:260,14,0	1/1:12,0:12:6.02:125,6,0
chr10	22980472	.	ACACG	A	1908.37	PASS	AB=0.975;AC=28;AF=0.500;AN=56;BaseQRankSum=2.421;DP=433;FS=2.037;HRun=0;HaplotypeScore=102.7495;InbreedingCoeff=-0.4096;MQ=51.22;MQ0=14;MQRankSum=-4.538;QD=5.33;ReadPosRankSum=4.575;VQSLOD=1.9158;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:19:5.87:36,6,0	0/1:7,0:7:20.16:20,0,28	0/0:12,0:4:8.48:0,8,73	0/1:10,0:2:0.91:1,0,12	0/1:22,0:22:99:235,0,103	0/1:20,0:19:51.63:52,0,78	0/1:11,0:10:47.91:48,0,67	0/1:27,0:26:76.42:129,0,76	0/1:10,0:10:60.48:103,0,60	1/1:8,12:19:17.39:432,17,0	0/1:6,13:19:13.06:201,0,13	0/0:14,0:12:11.48:0,11,111	0/1:8,1:9:5.16:5,0,81	0/1:10,0:9:3.53:4,0,89	0/1:12,0:12:27.28:38,0,27	0/1:10,0:10:44.79:45,0,68	0/0:30,0:29:7.41:0,7,127	0/1:23,0:22:52.10:52,0,126	0/1:15,0:14:19.58:20,0,37	0/1:9,0:8:3.06:3,0,15	0/0:19,0:17:3.51:0,4,35	0/1:11,0:11:65.77:66,0,67	1/1:12,0:12:11.64:69,12,0	0/1:16,0:16:19.84:20,0,160	0/1:22,0:22:72.23:199,0,72	0/1:16,0:16:94.35:158,0,94	0/1:16,0:16:75.61:76,0,136	1/1:12,0:12:6.01:58,6,0
chr10	22980474	.	ACG	A	1421.54	PASS	AB=0.988;AC=32;AF=0.571;AN=56;BaseQRankSum=3.964;DP=421;FS=4.907;HRun=0;HaplotypeScore=94.5768;InbreedingCoeff=-0.4335;MQ=51.41;MQ0=13;MQRankSum=-4.315;QD=3.64;ReadPosRankSum=5.519;VQSLOD=1.0654;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:19:5.88:36,6,0	1/1:4,3:7:1.49:20,1,0	0/0:12,0:4:8.51:0,9,73	0/1:9,0:2:0.91:1,0,12	0/1:22,0:22:99:180,0,154	0/1:19,0:18:50.89:51,0,97	0/1:11,0:10:23:23,0,99	0/1:24,0:23:89.42:160,0,89	0/1:10,0:10:75.77:76,0,89	1/1:19,1:19:3.76:221,4,0	0/1:17,1:18:16.57:126,0,17	0/1:13,0:11:10.31:10,0,121	0/1:9,0:9:5.05:5,0,107	0/1:10,0:9:2.99:3,0,129	0/1:12,0:12:7.39:17,0,7	0/1:10,0:10:11.86:16,0,12	0/1:28,1:28:3.31:3,0,57	0/1:22,0:21:54.02:59,0,54	0/1:15,1:15:23.37:111,0,23	1/1:8,1:8:2.01:6,2,0	0/0:18,0:16:7.68:0,8,40	0/1:9,0:10:59.85:60,0,91	1/1:12,0:12:11.60:69,12,0	0/1:15,0:15:14.93:15,0,176	0/1:22,0:22:97.45:149,0,97	0/1:15,0:15:99:100,0,147	0/1:16,0:16:25.26:25,0,200	1/1:12,0:12:5.75:30,6,0
chr10	22980476	.	GCA	G	1341.53	PASS	AB=0.959;AC=23;AF=0.411;AN=56;BaseQRankSum=4.789;DP=409;FS=4.228;HRun=0;HaplotypeScore=91.8072;InbreedingCoeff=-0.0966;MQ=51.87;MQ0=13;MQRankSum=-2.807;QD=4.97;ReadPosRankSum=6.822;VQSLOD=1.6934;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:19:0.47:1,0,0	1/1:8,0:8:8.54:73,9,0	0/0:13,0:5:7.70:0,8,155	0/0:8,0:2:5.81:0,6,52	0/0:23,0:23:8:0,8,138	0/0:19,0:18:6.76:0,7,104	0/0:11,0:10:4.02:0,4,100	0/1:21,0:20:13.54:435,0,14	0/1:8,0:8:18.67:19,0,92	0/1:17,0:16:23.74:24,0,29	0/1:17,0:17:11.68:32,0,12	0/0:12,0:10:10.24:0,10,126	0/0:9,0:9:8.94:0,9,101	0/0:9,0:8:10.59:0,11,156	1/1:11,0:11:7.66:43,8,0	1/1:9,0:9:5.90:57,6,0	0/1:29,0:28:40.69:41,0,164	0/1:22,0:21:53.80:54,0,99	0/1:13,0:12:66.45:204,0,66	0/1:9,0:8:17.68:18,0,19	0/0:21,0:19:0.24:0,0,48	0/1:10,0:10:4.73:5,0,104	0/1:12,0:12:0.11:0,0,0	0/0:13,0:13:4.97:0,5,106	0/1:22,0:22:29.24:29,0,112	0/1:6,9:15:43.14:298,0,43	0/1:13,3:16:76.42:99,0,76	1/1:10,2:12:6.02:67,6,0
chr10	22980478	.	A	ACGCACG	2374.08	PASS	AB=0.696;AC=15;AF=0.268;AN=56;BaseQRankSum=-3.242;DP=411;FS=2.149;HRun=0;HaplotypeScore=109.5266;InbreedingCoeff=0.1012;MQ=52.19;MQ0=13;MQRankSum=-1.305;QD=12.43;ReadPosRankSum=1.820;VQSLOD=2.8023;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:6.02:0,6,71	1/1:6,0:8:9.03:194,9,0	0/0:14,0:5:7.02:0,7,215	0/0:7,0:2:6.02:0,6,124	0/0:22,0:22:50.50:0,51,809	0/0:19,0:18:18.06:0,18,288	0/1:10,0:10:29.31:29,0,218	0/1:5,0:22:81.80:397,0,82	0/0:7,0:7:21.07:0,21,432	0/0:16,0:15:31.10:0,31,523	0/0:17,0:17:20.06:0,20,230	0/0:12,0:10:10.23:0,10,167	0/0:8,0:8:12.01:0,12,154	0/0:9,0:8:12.04:0,12,229	1/1:1,10:11:9.03:311,9,0	1/1:6,2:9:15.47:386,15,0	0/1:11,0:30:99:206,0,148	0/1:6,0:21:34.38:436,0,34	0/1:7,0:13:25.94:224,0,26	0/1:3,0:8:9.66:64,0,10	0/1:9,0:19:41.25:74,0,41	0/0:10,0:10:21.05:0,21,306	0/0:12,0:12:11.68:0,12,136	0/0:12,0:12:18:0,18,259	0/0:22,0:22:38.30:0,38,551	0/1:16,0:16:99:173,0,269	0/1:9,0:16:45.28:45,0,242	0/0:3,0:13:5.49:0,5,24
chr10	22980484	.	A	ACG	465.76	PASS	AB=0.824;AC=9;AF=0.161;AN=56;BaseQRankSum=2.405;DP=397;FS=0.886;HRun=0;HaplotypeScore=96.1865;InbreedingCoeff=0.1896;MQ=52.29;MQ0=14;MQRankSum=-2.679;QD=4.75;ReadPosRankSum=-0.849;VQSLOD=2.8239;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:9.01:0,9,135	0/1:3,5:8:6.81:39,0,7	0/0:13,0:5:14.99:0,15,190	0/0:9,0:3:8.82:0,9,105	0/0:19,0:19:41.70:0,42,603	0/0:21,0:20:27.06:0,27,343	0/0:9,0:8:17.63:0,18,212	0/0:24,0:24:47.21:0,47,531	0/0:8,0:8:24.01:0,24,302	0/0:15,0:14:35.91:0,36,497	0/0:16,0:16:23.51:0,24,297	0/0:10,0:8:9.03:0,9,134	0/0:7,0:7:9.03:0,9,133	0/0:11,0:10:14.99:0,15,150	1/1:10,0:10:3.19:21,3,0	0/1:5,2:7:37.16:57,0,37	0/1:26,1:26:81.77:82,0,131	0/1:19,3:21:38.44:236,0,38	0/1:13,2:14:99:137,0,171	1/1:9,0:8:4.61:30,5,0	0/0:17,3:18:2.88:0,3,16	0/0:9,0:9:14.98:0,15,194	0/0:12,0:12:11.73:0,12,167	0/0:9,0:9:11.99:0,12,145	0/0:22,0:22:41.69:0,42,395	0/0:16,0:16:44.91:0,45,464	0/0:14,0:14:20.21:0,20,228	0/0:15,0:15:11.89:0,12,104
chr10	22980733	.	A	AT	7538.89	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-12.124;DP=555;FS=14.001;HRun=6;HaplotypeScore=51.1022;InbreedingCoeff=0.9777;MQ=83.87;MQ0=0;MQRankSum=-2.328;QD=32.92;ReadPosRankSum=0.420;VQSLOD=3.7659;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,108,1075	1/1:1,9:10:24.08:302,24,0	0/0:20,0:20:44.07:0,44,466	0/0:12,0:12:4.05:0,4,236	0/0:22,0:22:60.12:0,60,605	0/0:19,0:19:54.12:0,54,549	0/0:19,0:19:57.09:0,57,562	1/1:2,30:32:90.29:1132,90,0	0/0:19,0:19:57.13:0,57,582	0/0:33,0:33:99:0,99,1005	0/0:19,0:19:54.11:0,54,544	0/0:27,0:27:78.18:0,78,795	0/0:17,0:17:45.08:0,45,452	0/0:25,0:25:69.16:0,69,703	1/1:2,17:19:51.16:642,51,0	1/1:1,23:24:63.20:793,63,0	1/1:1,26:27:66.21:830,66,0	1/1:1,14:15:45.14:564,45,0	1/1:3,17:20:48.14:590,48,0	1/1:2,9:11:27.09:340,27,0	1/1:0,18:18:54.17:679,54,0	0/0:11,0:11:27.06:0,27,275	0/0:15,0:15:36.08:0,36,367	0/0:18,0:18:48.07:0,48,476	0/0:13,0:13:36.08:0,36,367	1/1:1,20:21:32.59:724,33,0	1/1:3,23:25:57.18:717,57,0	1/1:0,6:6:18.06:226,18,0
chr10	22982808	.	CT	C	3131.10	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=9.848;DP=530;FS=10.617;HRun=4;HaplotypeScore=53.7678;InbreedingCoeff=0.9796;MQ=73.93;MQ0=0;MQRankSum=-1.588;QD=29.54;ReadPosRankSum=0.282;VQSLOD=2.6802;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:47.98:0,48,605	0/0:3,0:3:9.03:0,9,126	0/0:17,0:17:30.72:0,31,546	0/0:11,0:10:16.94:0,17,206	0/0:29,0:29:87.28:0,87,1201	0/0:18,0:18:54.18:0,54,753	0/0:12,0:12:36.11:0,36,487	1/1:5,31:36:90.21:1061,90,0	0/0:20,0:20:57.12:0,57,774	0/0:22,0:22:66.22:0,66,922	0/0:24,0:24:72.23:0,72,990	0/0:14,0:14:39.13:0,39,545	0/0:14,0:14:42.12:0,42,554	0/0:14,0:14:39.12:0,39,530	0/0:17,0:17:45.14:0,45,615	0/0:19,0:19:57.19:0,57,798	0/0:22,0:22:66.19:0,66,895	0/0:21,0:20:54.53:0,55,691	0/0:17,0:17:41.90:0,42,663	0/0:30,0:30:90.28:0,90,1225	0/0:7,0:7:21.07:0,21,294	0/0:16,0:16:48.13:0,48,630	0/0:22,0:22:63.20:0,63,864	0/0:9,0:9:27.09:0,27,376	0/0:29,0:29:84.25:0,84,1155	1/1:2,22:24:66.20:791,66,0	1/1:2,26:28:75.23:900,75,0	1/1:2,16:18:45.10:540,45,0
chr10	22982978	.	C	CA	892.72	PASS	AB=0.935;AC=6;AF=0.107;AN=56;BaseQRankSum=6.396;DP=608;FS=15.561;HRun=10;HaplotypeScore=63.4297;InbreedingCoeff=0.5794;MQ=77.86;MQ0=0;MQRankSum=0.305;QD=8.67;ReadPosRankSum=1.102;VQSLOD=0.6957;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:68.74:0,69,566	0/0:18,0:18:50.91:0,51,414	0/0:14,0:15:11.44:0,11,71	0/0:11,0:11:10.72:0,11,62	0/0:24,0:25:54.51:0,55,524	0/0:21,0:21:53.92:0,54,443	0/0:14,0:14:41.93:0,42,341	0/0:27,0:27:62.91:0,63,515	0/0:13,1:14:1.10:0,1,214	0/0:26,0:26:50.92:0,51,419	0/0:24,0:24:65.88:0,66,538	0/0:23,0:23:56.90:0,57,467	0/0:25,1:27:35.95:0,36,491	0/0:20,0:23:53.19:0,53,427	1/1:3,21:25:51.12:538,51,0	1/1:3,17:20:4.89:463,5,0	0/0:23,0:23:56.89:0,57,464	0/0:20,0:20:47.93:0,48,394	0/0:23,0:24:46.94:0,47,371	0/0:26,0:27:54.21:0,54,544	0/1:24,2:26:4.08:4,0,380	0/0:22,1:23:24.91:0,25,406	0/0:18,0:18:53.94:0,54,443	0/0:10,0:10:17.97:0,18,148	0/0:26,0:27:67.93:0,68,548	0/1:30,2:32:1.07:1,0,405	0/0:25,0:25:65.89:0,66,538	0/0:13,0:13:20.68:0,21,172
chr10	22983879	.	AT	A	8782.05	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-2.303;DP=495;FS=10.391;HRun=11;HaplotypeScore=53.2680;InbreedingCoeff=0.7869;MQ=67.85;MQ0=0;MQRankSum=-2.170;QD=18.49;ReadPosRankSum=3.401;VQSLOD=5.4726;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,24:33:62.86:517,63,0	1/1:1,7:8:20.97:172,21,0	0/0:11,0:7:17.94:0,18,157	0/0:9,0:9:9.02:0,9,95	1/1:6,11:17:3.96:239,4,0	1/1:4,14:18:38.94:320,39,0	1/1:4,13:18:34.99:277,35,0	1/1:8,14:23:11.98:291,12,0	1/1:1,10:11:29.95:246,30,0	1/1:6,23:29:62.86:516,63,0	1/1:3,17:20:9.92:287,10,0	1/1:2,15:17:4.45:239,4,0	1/1:2,12:14:35.95:296,36,0	1/1:2,5:7:14.98:123,15,0	1/1:3,17:21:49.96:400,50,0	1/1:3,11:15:25.98:203,26,0	1/1:5,31:36:61.41:707,61,0	1/1:1,14:15:38.95:320,39,0	1/1:7,16:23:44.77:369,45,0	1/1:4,26:30:74.85:610,75,0	1/1:0,8:8:23.97:197,24,0	1/1:2,16:18:47.94:394,48,0	1/1:3,15:18:44.94:369,45,0	1/1:0,9:9:26.97:222,27,0	1/1:3,15:18:41.93:345,42,0	1/1:1,24:25:74.86:605,75,0	1/1:2,16:18:47.93:394,48,0	1/1:1,5:6:14.98:123,15,0
chr10	22983952	.	GTT	G	2574.34	PASS	AB=0.650;AC=25;AF=0.446;AN=56;BaseQRankSum=-7.690;DP=426;FS=4.802;HRun=15;HaplotypeScore=81.0615;InbreedingCoeff=0.9055;MQ=71.39;MQ0=2;MQRankSum=1.586;QD=16.29;ReadPosRankSum=6.489;VQSLOD=2.9792;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:29:68.83:0,69,632	0/0:3,0:3:5.37:0,5,33	0/0:20,0:11:5.15:0,5,70	0/0:18,0:14:27.89:0,28,195	1/1:4,12:16:35.92:316,36,0	1/1:1,7:8:20.94:185,21,0	1/1:3,7:10:23.92:207,24,0	0/0:21,0:30:49.46:0,49,444	1/1:4,3:7:11.85:105,12,0	1/1:5,9:14:29.82:260,30,0	1/1:5,9:15:23.71:255,24,0	1/1:6,5:12:8.71:123,9,0	1/1:2,10:12:32.96:286,33,0	1/1:2,7:9:20.93:185,21,0	0/0:12,0:14:24.05:0,24,262	0/0:9,0:15:27.05:0,27,287	0/0:19,0:27:53.08:0,53,479	0/0:8,0:11:23.97:0,24,220	0/0:18,0:22:49.96:0,50,477	0/0:14,0:16:25.68:0,26,264	0/0:1,0:5:9.02:0,9,93	1/1:4,7:11:20.89:185,21,0	0/1:6,6:13:0.24:147,0,0	1/1:5,5:11:26.66:214,27,0	1/1:7,12:20:38.49:326,38,0	0/0:13,0:17:38.60:0,39,341	0/0:17,0:22:50.31:0,50,417	0/0:12,0:15:31.49:0,31,303
chr10	22984447	.	GGGT	G	5485.80	PASS	AB=0.986;AC=31;AF=0.554;AN=56;BaseQRankSum=-8.031;DP=461;FS=40.810;HRun=0;HaplotypeScore=147.2241;InbreedingCoeff=0.6003;MQ=60.98;MQ0=29;MQRankSum=-1.823;QD=20.24;ReadPosRankSum=0.695;VQSLOD=2.9349;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:23:14.96:15,0,57	0/0:8,0:8:9.06:0,9,79	0/0:26,0:6:12.03:0,12,163	0/1:28,0:11:16.83:17,0,185	1/1:1,11:12:24.08:422,24,0	1/1:1,12:12:18.06:317,18,0	1/1:1,12:12:12.04:211,12,0	0/1:34,0:31:99:293,0,278	1/1:1,13:13:30.10:509,30,0	1/1:0,16:16:48.16:829,48,0	1/1:0,6:6:15.01:231,15,0	1/1:0,8:8:15.05:264,15,0	1/1:0,12:13:24.08:407,24,0	1/1:1,10:11:15.01:229,15,0	0/0:22,0:21:44.35:0,44,363	0/1:12,1:13:25.37:25,0,183	0/0:28,0:27:22:0,22,450	0/0:11,0:11:21.61:0,22,255	0/1:13,0:12:57.57:153,0,58	0/0:17,0:16:41.03:0,41,321	0/0:39,0:38:79.30:0,79,671	1/1:0,10:10:12.04:211,12,0	1/1:0,9:9:20.95:370,21,0	1/1:3,12:13:30.10:506,30,0	1/1:1,14:14:27.09:476,27,0	0/0:18,0:18:7.43:0,7,279	0/0:11,0:10:26.99:0,27,236	0/0:10,0:9:27.01:0,27,253
chr10	22984448	.	G	GT	8179.37	PASS	AB=0.982;AC=52;AF=0.929;AN=56;BaseQRankSum=-1.618;DP=476;FS=22.241;HRun=0;HaplotypeScore=134.3712;InbreedingCoeff=0.3697;MQ=59.22;MQ0=29;MQRankSum=-2.660;QD=18.14;ReadPosRankSum=3.679;VQSLOD=4.4546;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:26,1:24:1.51:56,0,2	1/1:0,8:8:15.05:240,15,0	0/0:25,0:5:12.02:0,12,122	0/1:29,0:12:15.88:16,0,154	1/1:12,1:12:9.97:21,10,0	1/1:12,1:12:7.48:16,7,0	1/1:12,1:12:4.98:11,5,0	1/1:2,34:33:79.14:1063,79,0	1/1:14,0:13:14.22:57,14,0	1/1:16,0:16:27.60:150,28,0	1/1:6,0:6:4.88:11,5,0	1/1:8,0:8:6.23:14,6,0	1/1:13,0:13:11.73:56,12,0	1/1:10,0:10:3.63:8,4,0	1/1:4,21:24:46.51:699,47,0	1/1:2,11:13:31.35:471,31,0	1/1:4,23:26:64.09:968,64,0	1/1:1,10:11:27.56:430,28,0	1/1:3,11:13:39.08:521,39,0	1/1:6,15:20:37.07:578,37,0	1/1:5,35:39:76.61:1201,77,0	1/1:10,0:10:4.98:11,5,0	1/1:9,0:9:8.72:19,9,0	1/1:15,1:13:12.10:27,12,0	1/1:14,1:14:12.77:35,13,0	1/1:5,17:22:38.88:686,39,0	1/1:2,10:11:27.09:431,27,0	1/1:2,8:9:24.08:383,24,0
chr10	22984552	.	AAT	A	95.75	PASS	AB=1.000;AC=3;AF=0.060;AN=50;BaseQRankSum=1.432;DP=184;FS=0.000;HRun=0;HaplotypeScore=64.2130;InbreedingCoeff=0.3267;MQ=79.52;MQ0=1;MQRankSum=-1.816;QD=5.32;ReadPosRankSum=0.490;VQSLOD=2.3231;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,5:6:15.01:182,15,0	0/0:3,0:3:6.02:0,6,97	0/1:12,0:4:0:0,0,0	0/0:25,0:12:16.04:0,16,125	0/0:5,0:5:15.05:0,15,263	0/0:3,0:3:9.03:0,9,158	0/0:2,0:2:3.01:0,3,52	0/0:28,0:28:66.17:0,66,1090	0/0:2,0:2:3.01:0,3,53	0/0:3,0:3:3.01:0,3,53	./.	0/0:2,0:2:6.02:0,6,105	0/0:2,0:2:6:0,6,76	0/0:3,0:3:6.02:0,6,105	0/0:2,0:2:6.02:0,6,105	0/0:5,0:5:12.04:0,12,210	0/0:21,0:21:57.20:0,57,998	0/0:15,0:15:39.13:0,39,664	0/0:6,0:6:15.05:0,15,263	0/0:1,0:1:3.01:0,3,53	0/0:1,0:1:3.01:0,3,53	./.	./.	0/0:3,0:3:6:0,6,77	0/0:10,0:10:24.08:0,24,406	0/0:3,0:3:6.02:0,6,105	0/0:5,0:5:15.03:0,15,234	0/0:16,0:16:39.13:0,39,684
chr10	22986146	.	T	TA	6936.06	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-12.717;DP=566;FS=5.766;HRun=9;HaplotypeScore=51.5047;InbreedingCoeff=0.9806;MQ=71.77;MQ0=0;MQRankSum=-1.315;QD=25.22;ReadPosRankSum=1.626;VQSLOD=5.6745;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:44.97:0,45,387	0/0:6,0:6:18:0,18,156	0/0:6,0:6:8.97:0,9,78	0/0:14,0:14:27.04:0,27,234	1/1:7,27:34:75.12:803,75,0	1/1:3,20:23:60.16:664,60,0	1/1:4,12:16:10.04:339,10,0	0/0:32,0:32:74.94:0,75,647	1/1:1,8:10:23.90:247,24,0	1/1:6,18:25:60.15:650,60,0	1/1:3,18:21:45.12:498,45,0	1/1:1,15:16:39.11:431,39,0	1/1:5,19:24:31.10:570,31,0	1/1:4,20:25:60:645,60,0	0/0:20,0:20:50.95:0,51,438	0/0:22,0:22:59.97:0,60,521	0/0:23,0:23:59.96:0,60,517	0/0:14,0:14:22.27:0,22,205	0/0:18,0:18:50.96:0,51,436	0/0:24,0:25:74.02:0,74,631	0/0:8,0:8:20.87:0,21,171	1/1:3,14:18:38.94:412,39,0	1/1:3,25:28:63.17:697,63,0	1/1:0,6:6:15.04:166,15,0	1/1:5,23:28:75.18:814,75,0	0/0:28,0:28:71.96:0,72,625	0/0:34,0:34:95.94:0,96,825	0/0:22,0:22:35.59:0,36,470
chr10	22986458	.	TTCTC	T	265.88	PASS	AB=0.914;AC=18;AF=0.450;AN=40;BaseQRankSum=2.634;DP=585;FS=2.764;HRun=0;HaplotypeScore=103.7411;InbreedingCoeff=0.2350;MQ=64.56;MQ0=10;MQRankSum=-0.272;QD=1.11;ReadPosRankSum=2.028;VQSLOD=1.6231;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:34:14.87:0,15,153	0/0:10,0:10:2.96:0,3,19	./.	./.	1/1:20,0:20:2.99:23,3,0	./.	./.	0/0:30,0:30:1.25:0,1,3	1/1:18,0:18:3:28,3,0	0/0:23,0:21:0.94:0,1,2	1/1:22,0:22:3:28,3,0	1/1:20,0:20:3:28,3,0	1/1:20,0:20:6:54,6,0	./.	0/1:13,0:16:18.58:19,0,26	0/1:9,4:13:1.16:108,0,1	0/1:19,0:17:1.08:1,0,54	0/0:16,0:19:12.10:0,12,128	0/0:15,0:15:6.02:0,6,117	0/0:25,0:25:6.02:0,6,136	0/0:21,0:21:4.77:0,5,88	./.	./.	1/1:22,0:21:5.96:43,6,0	./.	0/1:23,0:23:3.14:3,0,69	0/1:19,0:22:34.97:53,0,35	0/1:24,0:24:0.17:0,0,0
chr10	22986496	.	CTCTCTCTCTCTCTCTT	C	2297.08	PASS	AB=1.000;AC=16;AF=0.286;AN=56;BaseQRankSum=3.596;DP=530;FS=13.363;HRun=0;HaplotypeScore=200.0754;InbreedingCoeff=0.0676;MQ=52.58;MQ0=21;MQRankSum=3.955;QD=9.82;ReadPosRankSum=0.972;VQSLOD=1.8754;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:31:53.67:0,54,1541	0/0:7,0:7:12.91:0,13,159	0/0:13,0:2:5.93:0,6,46	0/0:25,0:9:21.35:0,21,168	0/0:21,0:20:7.11:0,7,71	1/1:17,0:17:23.63:204,24,0	0/1:18,0:17:52.85:267,0,53	0/0:19,0:19:50.55:0,51,774	1/1:8,13:21:3.01:138,3,0	0/1:25,0:23:2.30:256,0,2	1/1:7,9:16:3.01:138,3,0	0/1:22,0:22:86.35:349,0,86	0/1:20,0:20:99:303,0,149	0/1:20,0:20:98.62:224,0,99	0/0:21,0:20:53.90:0,54,1284	0/1:11,0:11:98.01:98,0,634	0/0:24,0:22:45.63:0,46,1107	0/0:16,0:15:25.31:0,25,1015	0/0:12,0:11:25.82:0,26,899	0/0:14,0:13:28.02:0,28,1230	0/0:22,0:20:33.50:0,33,1166	0/1:9,0:8:56.83:57,0,163	0/1:19,0:18:17.48:140,0,17	0/1:23,0:22:99:211,0,167	0/1:13,0:12:76.90:77,0,83	0/0:21,0:21:32.23:0,32,1790	0/0:33,0:32:95.40:0,95,2473	0/0:16,0:13:29.99:0,30,822
chr10	22986510	.	CTT	C	2696.57	PASS	AB=1.000;AC=28;AF=0.500;AN=56;BaseQRankSum=3.754;DP=467;FS=5.075;HRun=3;HaplotypeScore=83.5197;InbreedingCoeff=0.6495;MQ=71.28;MQ0=11;MQRankSum=0.277;QD=11.28;ReadPosRankSum=2.210;VQSLOD=0.6959;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:35.38:0,35,386	0/0:4,0:4:8.66:0,9,59	0/0:25,0:14:22.54:0,23,261	0/0:29,0:17:18.09:0,18,231	0/0:2,14:16:1.55:0,2,4	1/1:12,0:12:26.84:224,27,0	1/1:13,0:12:29.97:251,30,0	0/0:22,0:22:56.10:0,56,491	1/1:13,0:13:2.98:22,3,0	1/1:21,0:19:48.05:452,48,0	1/1:9,0:9:2.98:21,3,0	1/1:17,0:17:44.62:364,45,0	1/1:15,0:15:41.59:313,42,0	1/1:12,0:12:35.83:283,36,0	0/0:23,0:22:19.58:0,20,365	0/1:11,0:11:14.65:15,0,130	0/1:21,0:21:0.53:1,0,259	0/0:13,0:12:13.64:0,14,217	0/0:18,0:17:23.94:0,24,359	0/0:15,0:14:33.57:0,34,342	0/0:23,0:23:23:0,23,373	1/1:5,0:5:14.97:123,15,0	1/1:11,0:11:29.96:248,30,0	1/1:18,0:17:35.93:297,36,0	1/1:8,0:8:7.02:138,7,0	0/1:17,0:17:74.69:75,0,255	0/1:36,0:35:75.59:76,0,422	0/0:10,0:8:20.97:0,21,176
chr10	22987043	.	T	TCA	1858.98	PASS	AB=0.898;AC=41;AF=0.788;AN=52;BaseQRankSum=-3.386;DP=548;FS=3.372;HRun=0;HaplotypeScore=103.1505;InbreedingCoeff=0.0638;MQ=67.03;MQ0=12;MQRankSum=3.507;QD=4.12;ReadPosRankSum=-0.446;VQSLOD=2.6376;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:24:9:89,9,0	1/1:7,0:7:3.01:43,3,0	./.	./.	0/1:11,3:13:19.77:71,0,20	1/1:17,0:16:3.01:43,3,0	0/1:35,2:38:20.86:230,0,21	1/1:20,0:20:8.90:59,9,0	1/1:11,3:15:3.01:44,3,0	1/1:14,3:17:12:141,12,0	1/1:19,0:19:5.95:70,6,0	0/1:17,6:24:20.68:38,0,21	1/1:9,5:14:3.01:44,3,0	0/1:20,0:19:20.85:58,0,21	0/0:13,0:21:14.98:0,15,80	0/0:18,0:26:22.73:0,23,112	1/1:19,9:29:12.04:176,12,0	0/1:14,1:15:45.23:93,0,45	0/1:16,0:16:0:0,0,0	1/1:15,3:18:3.01:44,3,0	0/1:24,6:30:11.01:79,0,11	1/1:17,0:17:5.98:64,6,0	1/1:14,0:14:3.01:44,3,0	1/1:17,7:23:12.04:176,12,0	1/1:6,4:10:3.01:44,3,0	1/1:12,0:17:21.47:225,21,0	1/1:22,0:21:8.07:58,8,0	1/1:6,0:6:8.55:67,9,0
chr10	22989315	.	C	CGTTGTTGTT	7296.65	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-8.485;DP=752;FS=0.519;HRun=0;HaplotypeScore=196.3801;InbreedingCoeff=0.9993;MQ=78.34;MQ0=0;MQRankSum=-11.935;QD=87.91;ReadPosRankSum=1.778;VQSLOD=4.5783;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:69.23:0,69,1893	0/0:12,0:12:30.10:0,30,830	0/0:23,0:23:54.16:0,54,1260	0/0:24,0:24:35.88:0,36,868	0/0:27,0:27:66.20:0,66,1712	0/0:29,0:29:81.25:0,81,2079	0/0:26,0:26:66.23:0,66,1837	0/0:38,0:38:96.29:0,96,2495	0/0:23,0:23:54.06:0,54,1264	0/0:28,0:28:72.25:0,72,1946	0/0:26,0:26:72.25:0,72,2026	0/0:30,0:30:81.26:0,81,2264	0/0:39,0:39:87.26:0,87,2372	0/0:30,0:30:81.25:0,81,2110	1/1:10,25:40:78.04:3547,78,0	1/1:12,27:43:84.29:3749,84,0	0/0:19,0:19:57.20:0,57,1566	0/0:24,0:24:66.19:0,66,1618	0/0:19,0:19:39.13:0,39,1081	0/0:36,0:36:90.28:0,90,2402	0/0:16,0:16:45.15:0,45,1200	0/0:25,0:25:57.20:0,57,1643	0/0:21,0:20:42.14:0,42,1192	0/0:24,0:24:57.20:0,57,1593	0/0:29,0:29:75.25:0,75,2073	0/0:27,0:27:63.22:0,63,1749	0/0:35,0:35:90.31:0,90,2561	0/0:11,0:11:30.10:0,30,830
chr10	22989590	.	AG	A	11588.06	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=10.501;DP=640;FS=19.794;HRun=1;HaplotypeScore=113.2734;InbreedingCoeff=0.9997;MQ=79.32;MQ0=0;MQRankSum=-1.440;QD=33.98;ReadPosRankSum=1.902;VQSLOD=3.1690;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:77.95:0,78,921	0/0:14,0:14:42.10:0,42,524	0/0:22,0:21:59.14:0,59,680	0/0:12,0:12:32.90:0,33,431	1/1:0,38:38:99:1374,111,0	1/1:1,19:20:51.14:690,51,0	1/1:0,23:23:57.19:790,57,0	0/0:36,0:36:99:0,105,1296	1/1:0,17:17:48.07:644,48,0	1/1:0,22:22:66.05:773,66,0	1/1:5,15:20:55.57:731,56,0	1/1:0,27:27:66.19:899,66,0	1/1:1,21:22:60.17:815,60,0	1/1:0,21:21:60.16:807,60,0	1/1:1,29:30:64.64:918,65,0	1/1:1,15:16:35.98:472,36,0	0/0:29,0:29:87.27:0,87,1166	0/0:13,0:13:39.12:0,39,511	0/0:27,0:27:81.23:0,81,1047	0/0:32,0:31:96.25:0,96,1261	0/0:13,0:13:39.09:0,39,483	1/1:0,22:22:57.05:728,57,0	1/1:1,22:23:56.61:738,57,0	1/1:0,15:15:33.11:460,33,0	1/1:1,24:25:52.60:749,53,0	0/0:31,0:31:93.23:0,93,1150	0/0:34,0:34:99:0,99,1218	0/0:10,0:10:27.09:0,27,367
chr10	22990102	.	AT	A	628.41	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-0.223;DP=457;FS=1.598;HRun=7;HaplotypeScore=83.0997;InbreedingCoeff=0.9442;MQ=61.57;MQ0=0;MQRankSum=-1.932;QD=19.04;ReadPosRankSum=0.406;VQSLOD=3.3066;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:45.12:0,45,551	0/0:11,0:11:26.37:0,26,174	0/0:7,0:7:18.06:0,18,223	0/0:5,0:5:9.03:0,9,113	0/0:26,0:26:66.21:0,66,830	0/0:23,0:23:63.20:0,63,792	0/0:11,0:11:27.07:0,27,324	0/0:30,0:30:84.27:0,84,1056	0/0:17,0:17:48.14:0,48,590	0/0:30,0:30:84.27:0,84,1057	0/0:22,0:22:60.18:0,60,742	0/0:8,0:8:24.08:0,24,302	0/0:12,0:12:33.10:0,33,406	0/0:15,0:15:42.13:0,42,528	1/1:2,19:21:48.04:475,48,0	1/1:0,12:12:27.06:275,27,0	0/0:18,1:19:27.91:0,28,329	0/0:25,0:25:42.60:0,43,402	0/0:10,0:10:22.43:0,22,134	0/0:26,0:26:47.92:0,48,458	0/0:5,0:5:14.52:0,15,83	0/0:10,0:10:24.08:0,24,302	0/0:14,0:14:33.11:0,33,415	0/0:7,0:7:15.05:0,15,189	0/0:19,0:19:57.18:0,57,715	0/0:21,0:21:60.19:0,60,754	0/0:21,0:21:57.14:0,57,696	0/0:11,0:11:24.07:0,24,302
chr10	22991579	.	G	GA	8099.43	PASS	AB=0.643;AC=43;AF=0.768;AN=56;BaseQRankSum=-4.477;DP=689;FS=0.483;HRun=12;HaplotypeScore=85.1682;InbreedingCoeff=0.3112;MQ=73.95;MQ0=0;MQRankSum=0.472;QD=13.13;ReadPosRankSum=-0.422;VQSLOD=4.8316;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:44,0:44:62.40:445,62,0	1/1:3,15:19:13.43:255,13,0	0/0:28,0:23:8.91:0,9,88	0/1:16,0:15:13.21:13,0,59	1/1:10,25:36:15.14:577,15,0	0/1:5,14:19:23.70:267,0,24	0/1:5,19:26:2.76:318,0,3	1/1:13,17:31:23.96:427,24,0	1/1:3,13:17:10.98:255,11,0	1/1:8,16:25:22.41:415,22,0	1/1:9,16:26:22.84:323,23,0	1/1:9,10:20:14.74:131,15,0	1/1:8,15:23:39.01:369,39,0	1/1:1,19:21:41.17:420,41,0	0/0:17,0:20:37.34:0,37,255	0/0:24,0:24:28.74:0,29,347	1/1:6,28:36:37.20:541,37,0	1/1:9,14:25:26.01:401,26,0	0/1:8,7:17:11.15:177,0,11	1/1:11,16:27:40.82:354,41,0	1/1:3,10:13:21.02:199,21,0	1/1:9,29:39:45.05:538,45,0	1/1:4,20:25:43.51:383,44,0	0/1:7,21:28:8.62:406,0,9	0/1:8,18:27:10.82:218,0,11	1/1:13,11:25:7.97:218,8,0	1/1:6,16:22:35.72:350,36,0	0/1:2,6:9:10.81:100,0,11
chr10	22991589	.	A	AC	1069.76	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=7.899;DP=656;FS=2.898;HRun=0;HaplotypeScore=97.8486;InbreedingCoeff=0.1070;MQ=68.09;MQ0=0;MQRankSum=-0.287;QD=4.67;ReadPosRankSum=12.285;VQSLOD=1.8322;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:2,38:41:80.62:1101,81,0	0/0:21,0:21:20.55:0,21,219	0/0:23,0:18:32.95:0,33,343	0/0:12,0:10:14.29:0,14,176	0/0:33,0:33:5.36:0,5,212	0/0:19,0:19:7.15:0,7,184	0/0:25,0:25:6.20:0,6,148	0/0:30,0:30:30.26:0,30,309	0/0:17,0:17:0.07:0,0,85	0/0:30,0:30:2.21:0,2,307	0/0:22,0:22:14.77:0,15,173	0/0:18,0:18:14.63:0,15,138	0/1:24,0:24:0.44:0,0,172	0/1:23,0:23:18.24:18,0,73	0/0:23,0:23:66.04:0,66,732	0/0:24,0:24:70.41:0,70,868	0/1:34,0:34:17.61:18,0,102	0/1:24,0:24:0.62:1,0,190	0/0:16,0:16:18.93:0,19,214	0/0:21,0:21:4.52:0,5,111	1/1:10,0:10:4.25:11,4,0	0/0:35,0:35:11.97:0,12,247	0/1:26,0:26:8.15:8,0,87	0/1:25,0:25:7.43:7,0,125	0/0:25,0:25:8.66:0,9,186	0/0:22,0:22:17.37:0,17,286	0/1:22,0:22:38.22:38,0,62	0/0:11,0:11:6.97:0,7,117
chr10	22991711	.	AAC	A	1619.39	PASS	AB=0.860;AC=30;AF=0.556;AN=54;BaseQRankSum=5.586;DP=708;FS=1.256;HRun=0;HaplotypeScore=133.5365;InbreedingCoeff=0.1488;MQ=70.06;MQ0=12;MQRankSum=-0.823;QD=3.48;ReadPosRankSum=1.570;VQSLOD=2.1462;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:41:28.65:135,29,0	1/1:4,0:8:5.68:28,6,0	./.	0/0:42,0:23:0.89:0,1,2	1/1:18,11:29:23.58:224,24,0	0/0:15,0:15:22.87:0,23,300	0/1:26,2:30:99:133,0,274	0/0:23,0:23:14.91:0,15,143	1/1:10,5:17:20.72:193,21,0	1/1:16,5:24:24.43:200,24,0	1/1:6,8:14:8.98:86,9,0	0/1:21,3:29:99:145,0,135	0/1:22,2:25:50.12:50,0,261	0/0:28,1:35:9.07:0,9,534	0/0:23,0:23:26.55:0,27,213	0/0:34,0:34:32.86:0,33,283	1/1:17,0:22:11.74:54,12,0	1/1:14,0:16:4.24:42,4,0	1/1:12,0:18:16.95:82,17,0	1/1:12,0:23:2.84:14,3,0	0/0:19,0:20:5.93:0,6,48	0/1:24,2:27:33.07:33,0,306	0/1:17,1:20:6.85:7,0,205	0/1:42,3:45:30.01:30,0,782	0/1:20,6:27:12.18:260,0,12	0/1:20,1:22:19.30:19,0,221	0/1:15,2:17:8.98:9,0,250	0/1:6,3:9:54.07:54,0,78
chr10	22991748	.	A	ACT	554.93	PASS	AB=0.548;AC=3;AF=0.054;AN=56;BaseQRankSum=0.840;DP=844;FS=61.006;HRun=0;HaplotypeScore=183.0006;InbreedingCoeff=0.6022;MQ=53.22;MQ0=17;MQRankSum=3.320;QD=7.82;ReadPosRankSum=1.767;VQSLOD=0.8118;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:89.10:0,89,694	0/0:11,0:11:23.93:0,24,190	0/0:45,0:14:35.99:0,36,322	0/0:45,0:15:33.51:0,34,315	0/0:25,0:26:44.49:0,44,329	0/0:19,0:19:50.95:0,51,533	0/0:33,0:32:58.25:0,58,658	0/0:34,0:34:89.96:0,90,801	0/0:26,0:26:65.73:0,66,514	0/0:31,0:31:70.90:0,71,594	0/0:18,0:18:10.99:0,11,192	0/0:35,0:35:89.76:0,90,779	0/0:31,0:31:80.91:0,81,782	0/0:45,0:45:64.02:0,64,894	0/1:6,4:34:29.76:222,0,30	1/1:4,27:37:12.35:433,12,0	0/0:29,0:29:47.83:0,48,361	0/0:24,0:24:47.50:0,48,376	0/0:21,0:19:53.70:0,54,422	0/0:21,0:21:23.96:0,24,197	0/0:43,0:39:55.58:0,56,542	0/0:26,0:26:50.93:0,51,529	0/0:27,0:27:26.04:0,26,466	0/0:54,0:53:99:0,144,1525	0/0:31,0:31:68.67:0,69,564	0/0:23,0:23:65.91:0,66,634	0/0:17,0:17:35.96:0,36,392	0/0:15,0:15:26.87:0,27,243
chr10	22992006	.	ATG	A	83.48	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=10.734;DP=1183;FS=45.251;HRun=0;HaplotypeScore=307.2308;InbreedingCoeff=0.6613;MQ=58.82;MQ0=4;MQRankSum=0.289;QD=0.68;ReadPosRankSum=1.828;VQSLOD=1.3530;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:63,0:63:99:0,148,2004	0/0:25,0:25:63.11:0,63,769	0/0:48,1:30:59.60:0,60,1219	0/0:47,0:26:27.31:0,27,907	0/0:31,0:31:81.24:0,81,1027	0/0:22,0:22:57.07:0,57,673	0/0:38,0:38:98.95:0,99,1106	0/0:34,0:34:87.15:0,87,1289	0/0:45,1:46:99:0,109,1372	0/0:49,0:49:99:0,132,1612	0/0:14,0:14:39.12:0,39,535	0/0:52,0:52:99:0,144,1753	0/0:68,0:68:99:0,131,1765	0/0:70,0:70:99:0,182,2106	1/1:75,0:75:29.69:131,30,0	0/1:48,0:48:9.83:58,0,10	0/0:56,0:56:99:0,159,2000	0/0:50,1:51:9.14:0,9,1307	0/0:23,0:22:53.72:0,54,939	0/0:24,0:24:49.46:0,49,740	0/0:80,2:82:99:0,112,2339	0/0:34,0:34:78.63:0,79,930	0/0:28,0:28:59.54:0,60,682	0/0:58,0:58:99:0,106,1237	0/0:27,0:27:67.92:0,68,778	0/0:35,0:35:99:0,105,1465	0/0:24,0:23:60.17:0,60,742	0/0:10,0:10:21.04:0,21,281
chr10	22992007	.	TGCAC	T	11530.60	PASS	AB=0.998;AC=17;AF=0.304;AN=56;BaseQRankSum=1.500;DP=1172;FS=39.688;HRun=0;HaplotypeScore=298.4210;InbreedingCoeff=-0.0617;MQ=58.93;MQ0=4;MQRankSum=0.445;QD=17.60;ReadPosRankSum=11.875;VQSLOD=2.2437;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:63,0:63:99:0,166,3078	0/0:24,0:24:63.14:0,63,1156	0/0:46,0:29:60.94:0,61,1276	0/0:44,0:26:57.74:0,58,1134	0/1:31,0:31:99:415,0,113	0/1:22,0:22:91.74:230,0,92	0/1:37,0:37:46.95:585,0,47	0/0:34,0:34:87.18:0,87,1393	0/1:46,0:46:99:553,0,163	0/1:48,0:48:94.88:724,0,95	0/1:14,0:14:99:120,0,110	0/1:53,0:53:99:762,0,149	0/1:68,0:68:81.83:999,0,82	0/1:71,0:71:99:1063,0,133	1/1:0,72:73:99:2590,129,0	1/1:0,46:46:72.25:1497,72,0	0/0:55,0:55:99:0,156,2734	0/0:51,0:51:69.70:0,70,1894	0/0:22,0:21:60.13:0,60,1015	0/0:23,0:23:60.09:0,60,1057	0/0:84,0:84:99:0,195,3498	0/1:32,1:33:96.66:416,0,97	0/1:28,0:28:11.29:456,0,11	0/1:57,0:57:42.04:643,0,42	0/1:28,0:28:4.95:479,0,5	0/0:36,0:36:99:0,108,2068	0/0:24,0:23:60.13:0,60,1086	0/0:8,0:8:18.02:0,18,326
chr10	22992008	.	GCACA	G	19236.21	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-12.214;DP=1207;FS=12.212;HRun=0;HaplotypeScore=279.5641;InbreedingCoeff=0.9941;MQ=58.87;MQ0=4;MQRankSum=0.456;QD=29.59;ReadPosRankSum=5.317;VQSLOD=3.4795;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:65:99:0,138,2362	0/0:5,0:23:51.17:0,51,876	0/0:48,0:28:40.03:0,40,962	0/0:45,0:26:47.64:0,48,948	1/1:8,23:31:57.19:962,57,0	1/1:6,15:22:18.10:557,18,0	1/1:5,29:36:68.51:1281,69,0	0/0:22,0:36:57.19:0,57,1012	1/1:13,32:45:75:1266,75,0	1/1:11,37:49:99:1810,111,0	1/1:7,7:14:21.03:324,21,0	1/1:13,38:53:99:1745,107,0	1/1:10,55:65:99:2175,129,0	1/1:14,54:71:99:2360,144,0	1/1:73,0:73:99:1586,129,0	1/1:46,0:46:72.23:952,72,0	0/0:18,0:60:99:0,114,1969	0/0:20,0:56:85.09:0,85,1504	0/0:16,0:26:51.14:0,51,791	0/0:7,0:26:48.14:0,48,776	0/0:27,0:93:99:0,156,2614	1/1:8,25:33:60.04:878,60,0	1/1:4,24:28:53.83:911,54,0	1/1:12,44:56:84.05:1417,84,0	1/1:4,23:28:60.21:1013,60,0	0/0:20,0:46:99:0,123,1954	0/0:4,0:22:45.15:0,45,791	0/0:6,0:9:12.04:0,12,233
chr10	22993967	.	G	GTC	1881.33	PASS	AB=1.000;AC=35;AF=0.673;AN=52;BaseQRankSum=5.866;DP=232;FS=2.244;HRun=0;HaplotypeScore=50.7567;InbreedingCoeff=0.4621;MQ=68.47;MQ0=2;MQRankSum=-0.399;QD=12.22;ReadPosRankSum=-1.785;VQSLOD=2.9138;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:5:5.72:0,6,30	0/1:2,0:2:6.16:22,0,6	0/1:2,0:2:0:0,0,0	0/0:8,0:5:8.54:0,9,51	1/1:3,9:12:9.03:149,9,0	1/1:3,11:14:15.05:248,15,0	1/1:1,4:5:8.99:118,9,0	0/0:29,0:28:63.15:0,63,724	1/1:5,0:5:14.93:118,15,0	1/1:7,0:7:17.92:170,18,0	1/1:3,8:11:3.01:50,3,0	1/1:2,5:7:9.03:148,9,0	1/1:1,7:8:6.02:99,6,0	1/1:0,5:5:3.01:50,3,0	./.	1/1:4,0:4:2.94:18,3,0	0/1:15,0:15:14.24:163,0,14	0/1:10,0:10:2.15:106,0,2	1/1:18,0:18:9.85:217,10,0	1/1:6,0:6:1.66:83,2,0	0/1:3,0:3:3.50:37,0,3	1/1:3,0:3:5.99:50,6,0	1/1:3,1:4:9:100,9,0	./.	1/1:2,11:13:6.49:101,6,0	0/0:5,0:5:15.05:0,15,195	0/0:15,0:15:32.91:0,33,345	0/0:9,0:9:24.06:0,24,296
chr10	22993991	.	GTA	G	1186.14	PASS	AB=1.000;AC=23;AF=0.500;AN=46;BaseQRankSum=-7.563;DP=192;FS=0.788;HRun=0;HaplotypeScore=54.9388;InbreedingCoeff=0.3126;MQ=63.33;MQ0=3;MQRankSum=3.455;QD=8.79;ReadPosRankSum=-4.670;VQSLOD=2.3531;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,0:8:2.84:14,3,0	0/0:1,0:3:2.99:0,3,24	0/0:3,0:2:0:0,0,0	./.	0/0:4,0:4:5.88:0,6,19	0/1:12,0:12:8.10:17,0,8	0/1:5,0:5:2.22:2,0,11	1/1:14,17:32:59.21:579,59,0	0/0:3,0:3:0:0,0,0	0/1:5,0:5:15.55:16,0,35	0/1:6,0:6:2.50:21,0,2	1/1:7,0:7:0.98:37,1,0	1/1:8,0:8:0.84:8,1,0	0/0:2,0:2:2.22:0,2,7	./.	./.	0/1:5,0:14:0.78:1,0,124	0/0:3,0:8:14.94:0,15,115	0/0:7,0:17:3.65:0,4,202	0/0:1,0:5:5.99:0,6,49	0/0:1,0:3:6:0,6,51	./.	1/1:2,0:2:1.46:17,1,0	./.	1/1:8,0:8:3.49:26,3,0	1/1:0,5:5:15.03:170,15,0	1/1:0,10:11:23.91:269,24,0	1/1:5,6:10:12.04:146,12,0
chr10	22994509	.	CT	C	810.53	PASS	AB=0.852;AC=6;AF=0.107;AN=56;BaseQRankSum=2.574;DP=632;FS=1.039;HRun=12;HaplotypeScore=79.2131;InbreedingCoeff=0.5108;MQ=75.96;MQ0=0;MQRankSum=0.186;QD=7.87;ReadPosRankSum=1.530;VQSLOD=2.7833;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:42.08:0,42,451	0/0:15,0:15:22.50:0,23,371	0/0:20,0:19:5.51:0,6,178	0/0:16,0:15:23.19:0,23,243	0/0:28,0:30:28.79:0,29,519	0/0:24,0:24:37:0,37,523	0/0:12,1:13:0.81:0,1,188	0/0:27,0:28:47.87:0,48,451	0/0:19,0:19:36.03:0,36,351	0/0:23,1:24:24.85:0,25,430	0/0:12,0:12:30.06:0,30,305	0/0:23,0:23:48.09:0,48,481	0/0:30,0:31:74.94:0,75,719	0/0:17,0:17:48.03:0,48,454	1/1:1,30:31:77.70:604,78,0	1/1:5,17:22:38.80:302,39,0	0/0:21,0:21:25.97:0,26,331	0/0:14,0:14:38.99:0,39,369	0/1:18,3:21:15.94:16,0,362	0/0:52,2:54:84.15:0,84,1163	0/0:11,1:12:6.79:0,7,236	0/0:21,2:23:7.60:0,8,426	0/0:22,0:22:50.27:0,50,479	0/0:23,0:23:57.06:0,57,561	0/0:20,3:24:33.66:0,34,493	0/0:32,0:34:78.05:0,78,813	0/1:23,6:29:23.89:24,0,480	0/0:9,0:9:20.30:0,20,173
chr10	22994671	.	TC	T	1747.61	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-5.657;DP=647;FS=1.849;HRun=2;HaplotypeScore=100.2278;InbreedingCoeff=0.9985;MQ=76.96;MQ0=0;MQRankSum=-1.621;QD=32.36;ReadPosRankSum=0.924;VQSLOD=3.4320;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:75.24:0,75,1098	0/0:11,0:11:30.10:0,30,450	0/0:15,0:15:45.03:0,45,611	0/0:22,0:20:54.07:0,54,782	0/0:37,0:37:99:0,105,1545	0/0:29,0:29:87.27:0,87,1282	0/0:22,0:22:63.21:0,63,943	0/0:36,0:36:99:0,105,1519	0/0:21,0:21:57.18:0,57,830	0/0:27,0:27:81.27:0,81,1214	0/0:23,0:23:66.22:0,66,989	0/0:10,0:10:27.06:0,27,359	0/0:31,0:31:87.26:0,87,1260	0/0:17,0:17:48.14:0,48,674	1/1:0,28:28:75.24:974,75,0	1/1:0,26:26:69.22:895,69,0	0/0:16,0:16:45.04:0,45,621	0/0:14,0:14:33.08:0,33,471	0/0:17,0:17:48.15:0,48,679	0/0:25,0:25:75.23:0,75,1074	0/0:28,0:28:78.26:0,78,1160	0/0:26,0:26:78.25:0,78,1140	0/0:26,0:26:72.23:0,72,1057	0/0:26,0:26:69.17:0,69,971	0/0:23,0:23:66.19:0,66,947	0/0:29,0:29:84.28:0,84,1259	0/0:26,0:26:75.25:0,75,1123	0/0:9,0:9:27.09:0,27,404
chr10	22994682	.	A	AT	13919.69	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-13.065;DP=669;FS=6.916;HRun=10;HaplotypeScore=68.0126;InbreedingCoeff=0.9888;MQ=75.83;MQ0=0;MQRankSum=-2.801;QD=24.99;ReadPosRankSum=2.026;VQSLOD=5.3660;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:26:63.96:0,64,501	1/1:0,13:13:36.09:384,36,0	0/0:12,0:13:16.99:0,17,129	0/0:19,0:17:37.79:0,38,263	1/1:6,35:41:77.49:994,77,0	1/1:5,24:29:50.54:743,51,0	1/1:5,17:22:51.13:544,51,0	1/1:8,27:35:81.20:864,81,0	1/1:4,14:18:36.09:384,36,0	1/1:6,26:32:63.48:862,63,0	1/1:3,26:29:25.83:663,26,0	1/1:2,12:14:33.08:350,33,0	1/1:1,28:29:78.20:832,78,0	1/1:1,17:18:45.11:480,45,0	0/0:25,0:25:59.92:0,60,493	0/0:29,0:29:56.88:0,57,468	1/1:3,14:17:39.10:416,39,0	1/1:2,13:15:11.44:324,11,0	1/1:4,10:14:30.08:320,30,0	1/1:3,23:26:63.10:649,63,0	1/1:3,21:24:60.15:636,60,0	1/1:4,23:27:60.11:625,60,0	1/1:4,22:26:63.16:672,63,0	1/1:4,27:31:72.15:767,72,0	1/1:4,21:25:54.14:576,54,0	1/1:5,28:33:41.96:837,42,0	1/1:4,23:28:44.53:679,45,0	1/1:0,11:11:30.08:320,30,0
chr10	22994940	.	T	TA	2801.48	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-12.177;DP=767;FS=2.188;HRun=1;HaplotypeScore=69.2872;InbreedingCoeff=0.9833;MQ=80.89;MQ0=0;MQRankSum=-0.708;QD=38.91;ReadPosRankSum=3.000;VQSLOD=4.4470;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,123,1596	0/0:4,0:4:12.04:0,12,156	0/0:17,0:17:48.59:0,49,592	0/0:21,0:21:62.01:0,62,775	0/0:26,0:26:75.22:0,75,942	0/0:28,0:28:78.25:0,78,1012	0/0:26,0:26:75.20:0,75,928	0/0:38,0:38:99:0,105,1350	0/0:32,0:32:90.29:0,90,1168	0/0:32,0:32:96.30:0,96,1224	0/0:28,0:28:81.24:0,81,1024	0/0:33,0:33:93.29:0,93,1193	0/0:33,0:33:96.31:0,96,1246	0/0:31,0:31:90.28:0,90,1153	1/1:3,40:43:99:1664,111,0	1/1:1,28:29:84.28:1259,84,0	0/0:33,0:33:90.27:0,90,1153	0/0:19,0:19:54.13:0,54,682	0/0:25,0:25:72.23:0,72,934	0/0:33,0:33:96.30:0,96,1232	0/0:39,0:39:99:0,117,1497	0/0:17,0:17:51.17:0,51,662	0/0:19,0:19:54.16:0,54,686	0/0:29,0:29:87.27:0,87,1116	0/0:22,0:22:63.20:0,63,818	0/0:23,0:23:66.21:0,66,857	0/0:38,0:38:99:0,111,1408	0/0:8,0:8:24.08:0,24,312
chr10	22995350	.	AGCCTGC	A	3761.04	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.054;DP=760;FS=0.524;HRun=0;HaplotypeScore=166.7066;InbreedingCoeff=0.9993;MQ=82.58;MQ0=0;MQRankSum=-12.064;QD=57.86;ReadPosRankSum=1.592;VQSLOD=3.9300;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,154,5391	0/0:9,0:9:27.09:0,27,928	0/0:15,0:15:39.13:0,39,1225	0/0:29,0:29:78.24:0,78,2447	0/0:16,0:16:48.16:0,48,1691	0/0:27,0:27:78.25:0,78,2614	0/0:19,0:19:57.20:0,57,1985	0/0:32,0:32:90.30:0,90,3040	0/0:32,0:32:93.32:0,93,3308	0/0:32,0:32:93.31:0,93,3100	0/0:18,0:18:54.19:0,54,1933	0/0:29,0:29:84.23:0,84,2785	0/0:32,0:32:96.33:0,96,3356	0/0:50,0:50:99:0,150,5136	1/1:3,31:34:84.29:1965,84,0	1/1:2,29:31:75.25:1796,75,0	0/0:30,0:30:90.30:0,90,3086	0/0:31,0:31:90.30:0,90,3142	0/0:21,0:21:63.22:0,63,2104	0/0:16,0:16:45.13:0,45,1519	0/0:34,0:34:99:0,99,3546	0/0:27,0:27:81.28:0,81,2884	0/0:21,0:21:51.18:0,51,1793	0/0:28,0:28:78.27:0,78,2809	0/0:28,0:28:84.28:0,84,2836	0/0:28,0:28:84.28:0,84,2907	0/0:27,0:27:81.26:0,81,2666	0/0:11,0:11:33.11:0,33,1178
chr10	22995635	.	A	ATT	5105.17	PASS	AB=0.551;AC=21;AF=0.375;AN=56;BaseQRankSum=-4.436;DP=580;FS=8.162;HRun=10;HaplotypeScore=78.8318;InbreedingCoeff=0.9387;MQ=76.54;MQ0=0;MQRankSum=-4.323;QD=23.53;ReadPosRankSum=-1.208;VQSLOD=3.8303;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,0:12:25.42:88,25,0	1/1:2,6:8:15.05:224,15,0	0/0:21,0:21:46.36:0,46,438	0/0:14,0:14:24.02:0,24,244	0/0:23,0:23:60.06:0,60,595	0/0:19,0:21:49.93:0,50,523	0/0:13,0:13:33.03:0,33,321	1/1:6,29:40:95.75:1316,96,0	0/0:13,0:13:36.06:0,36,366	0/0:24,0:24:60.10:0,60,610	0/0:22,0:22:63.11:0,63,638	0/0:19,0:19:48.07:0,48,480	0/0:20,0:20:57.09:0,57,573	0/0:19,0:19:48.10:0,48,488	0/0:26,0:26:42.50:0,43,464	0/0:23,0:23:62.46:0,62,455	1/1:5,19:23:63.14:889,63,0	1/1:1,9:11:27.09:402,27,0	1/1:5,12:17:36.08:494,36,0	1/1:3,18:22:59.61:809,60,0	1/1:1,14:15:33.11:492,33,0	0/0:29,0:30:74.88:0,75,814	0/0:21,0:21:53.97:0,54,543	0/0:20,0:20:60.12:0,60,603	0/0:34,0:34:90.14:0,90,907	0/1:5,0:26:5.10:119,0,5	1/1:4,0:29:52.15:183,52,0	1/1:2,0:12:24.95:87,25,0
chr10	22995733	.	CAG	C	4382.91	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=10.635;DP=584;FS=3.329;HRun=0;HaplotypeScore=74.5616;InbreedingCoeff=0.9981;MQ=91.00;MQ0=1;MQRankSum=-2.021;QD=43.40;ReadPosRankSum=2.505;VQSLOD=6.6651;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:63.22:0,63,1279	1/1:0,9:9:24.08:391,24,0	0/0:21,0:21:63.15:0,63,1092	0/0:29,0:28:80.92:0,81,1499	0/0:17,0:17:51.16:0,51,984	0/0:20,0:20:60.21:0,60,1207	0/0:18,0:18:54.19:0,54,1095	0/0:28,0:28:84.28:0,84,1624	0/0:18,0:18:54.19:0,54,1094	0/0:25,0:25:75.25:0,75,1487	0/0:15,0:15:42.13:0,42,795	0/0:22,0:22:66.22:0,66,1294	0/0:26,0:26:78.23:0,78,1504	0/0:27,0:27:81.28:0,81,1643	0/0:26,0:26:78.27:0,78,1584	0/0:32,0:32:96.33:0,96,1949	1/1:0,27:27:75.26:1223,75,0	1/1:0,8:8:21.07:343,21,0	1/1:0,13:13:39.10:567,39,0	1/1:0,13:13:30.10:489,30,0	1/1:0,31:31:84.29:1370,84,0	0/0:10,0:10:30.10:0,30,597	0/0:20,0:20:57.20:0,57,1156	0/0:34,0:34:99:0,102,2035	0/0:15,0:15:45.14:0,45,865	0/0:18,0:17:54.19:0,54,1090	0/0:33,0:33:99:0,99,2009	0/0:8,0:8:24.08:0,24,487
chr10	22999074	.	CTT	C	6594.22	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=9.675;DP=544;FS=2.085;HRun=12;HaplotypeScore=110.7480;InbreedingCoeff=0.9789;MQ=70.46;MQ0=1;MQRankSum=-1.114;QD=24.51;ReadPosRankSum=2.510;VQSLOD=4.6839;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:37:84.15:0,84,906	0/0:2,0:5:9.01:0,9,85	0/0:22,0:17:28.15:0,28,277	0/0:9,1:7:7.44:0,7,99	1/1:1,25:26:75.15:761,75,0	1/1:3,18:22:47.82:470,48,0	1/1:3,19:22:51.10:519,51,0	0/0:37,0:36:75.25:0,75,1116	1/1:2,12:14:27.05:274,27,0	1/1:1,22:23:66.14:666,66,0	1/1:0,16:16:42.10:427,42,0	1/1:0,12:12:33.08:336,33,0	1/1:2,21:23:60.12:610,60,0	1/1:7,20:27:60.09:610,60,0	0/0:3,0:16:29.94:0,30,105	0/0:5,0:19:35.29:0,35,134	0/0:2,0:9:17.90:0,18,174	0/0:6,0:21:54.09:0,54,562	0/0:4,0:16:39.08:0,39,418	0/0:8,0:19:39.05:0,39,425	0/0:9,0:19:33.08:0,33,392	1/1:1,14:15:42.09:427,42,0	1/1:4,15:20:38.81:378,39,0	1/1:2,25:27:60.13:610,60,0	1/1:3,17:22:47.43:506,47,0	0/0:18,0:19:53.67:0,54,768	0/0:19,0:19:54.18:0,54,801	0/0:7,0:7:20.99:0,21,257
chr10	22999183	.	CAG	C	82.94	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=0.037;DP=421;FS=4.712;HRun=0;HaplotypeScore=76.3915;InbreedingCoeff=0.0733;MQ=49.04;MQ0=20;MQRankSum=-0.131;QD=0.83;ReadPosRankSum=2.002;VQSLOD=0.9207;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,20:21:9.03:137,9,0	0/1:4,0:4:8.49:8,0,19	0/0:21,0:11:16.25:0,16,219	0/1:25,0:14:20.80:21,0,161	0/0:9,0:8:2.98:0,3,22	0/0:20,0:20:17.78:0,18,137	0/0:19,0:15:29.79:0,30,240	0/0:27,0:21:53.89:0,54,692	0/0:7,0:7:5.95:0,6,44	0/0:17,0:15:36.86:0,37,257	0/0:8,0:8:2.99:0,3,24	0/0:11,0:10:11.46:0,11,70	0/0:13,0:13:20.54:0,21,130	0/0:18,0:17:17.91:0,18,142	0/0:15,0:15:11.73:0,12,81	0/0:20,0:20:14.53:0,15,94	0/0:25,0:23:17.87:0,18,134	0/1:13,0:13:16.03:16,0,65	0/1:15,0:12:18.07:18,0,72	0/0:5,0:5:5.79:0,6,38	0/1:20,0:17:2.61:3,0,99	0/0:13,0:13:5.99:0,6,50	0/0:7,0:7:3:0,3,25	0/0:24,0:23:20.17:0,20,124	0/0:16,0:14:23.79:0,24,175	0/0:14,0:13:18.29:0,18,344	0/0:9,0:9:17.78:0,18,300	0/0:3,0:2:6.02:0,6,114
chr10	22999185	.	GACAC	G	876.42	PASS	AB=0.619;AC=25;AF=0.543;AN=46;BaseQRankSum=2.705;DP=423;FS=6.705;HRun=0;HaplotypeScore=79.4779;InbreedingCoeff=0.5730;MQ=46.11;MQ0=26;MQRankSum=0.866;QD=4.36;ReadPosRankSum=3.342;VQSLOD=0.3965;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:20:8.96:0,9,69	0/0:3,0:4:2.60:0,3,10	./.	0/0:24,0:13:6.51:0,7,75	./.	1/1:8,12:20:3.01:46,3,0	1/1:19,0:15:11.23:82,11,0	0/0:27,0:20:26.94:0,27,376	./.	1/1:8,0:15:15.05:225,15,0	1/1:2,8:10:3:26,3,0	1/1:11,0:10:5.60:41,6,0	1/1:14,0:14:11.52:108,12,0	1/1:17,0:16:3.01:31,3,0	1/1:4,10:14:3.01:47,3,0	1/1:5,14:19:9.03:136,9,0	0/0:12,0:23:2.97:0,3,20	0/1:5,0:12:6.58:33,0,7	0/0:7,0:11:16.02:0,16,84	1/1:6,0:7:3.01:47,3,0	0/0:23,0:17:2.91:0,3,7	./.	./.	1/1:9,15:22:12.04:184,12,0	1/1:16,0:14:2.75:32,3,0	0/0:15,0:14:27.33:0,27,268	0/0:11,0:11:17.98:0,18,255	0/0:3,0:2:6.02:0,6,84
chr10	23000405	.	TA	T	4260.76	PASS	AB=0.754;AC=31;AF=0.554;AN=56;BaseQRankSum=0.794;DP=680;FS=2.518;HRun=14;HaplotypeScore=87.6510;InbreedingCoeff=0.6223;MQ=70.06;MQ0=4;MQRankSum=-0.489;QD=9.84;ReadPosRankSum=5.750;VQSLOD=4.5198;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:6,0:19:16.94:44,0,17	0/0:11,0:14:26.69:0,27,219	0/0:26,0:15:13.21:0,13,96	0/1:26,0:17:8.41:8,0,38	1/1:10,26:39:42.40:404,42,0	1/1:10,9:19:10.94:217,11,0	1/1:2,15:17:41.61:288,42,0	0/0:14,0:26:40.34:0,40,229	1/1:2,13:15:29.74:205,30,0	1/1:9,16:25:44:307,44,0	0/1:10,13:23:31.07:221,0,31	1/1:6,15:21:16.73:260,17,0	1/1:10,12:23:9.75:200,10,0	1/1:12,11:23:38.52:264,39,0	1/1:14,14:27:5.85:282,6,0	0/1:11,14:25:54.06:234,0,54	0/0:42,2:44:54.90:0,55,782	0/0:15,0:19:29.20:0,29,230	0/1:24,3:27:11.71:12,0,301	0/0:36,0:37:63.53:0,64,598	0/0:9,0:9:24:0,24,214	1/1:8,10:19:37.89:229,38,0	1/1:7,20:27:25.18:310,25,0	1/1:7,13:20:43.45:293,43,0	1/1:10,26:36:49.46:484,49,0	0/0:5,0:30:55.01:0,55,399	0/0:11,0:25:36.18:0,36,252	0/0:7,0:16:33.90:0,34,182
chr10	23003719	.	TA	T	10478.14	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=9.313;DP=599;FS=3.404;HRun=9;HaplotypeScore=59.1493;InbreedingCoeff=0.9928;MQ=66.80;MQ0=0;MQRankSum=-0.713;QD=22.68;ReadPosRankSum=3.555;VQSLOD=5.8263;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:36.07:0,36,401	1/1:1,11:12:33.02:302,33,0	0/0:7,0:7:15.04:0,15,164	0/0:5,0:5:15:0,15,159	1/1:6,26:32:66.02:604,66,0	1/1:3,21:24:60.02:549,60,0	1/1:1,17:18:51.03:467,51,0	0/0:43,0:43:99:0,105,1185	1/1:3,9:12:27.01:247,27,0	1/1:3,29:32:87.04:796,87,0	1/1:5,29:34:81.03:741,81,0	1/1:1,22:23:57.03:522,57,0	1/1:2,22:24:57.03:522,57,0	1/1:5,18:23:54.02:494,54,0	1/1:4,18:22:48.02:439,48,0	1/1:3,26:29:70.27:704,70,0	1/1:2,18:20:48.02:439,48,0	1/1:2,15:17:42.02:384,42,0	1/1:5,17:22:51.02:467,51,0	1/1:3,31:34:87.04:796,87,0	1/1:0,12:12:36.02:330,36,0	1/1:1,12:13:30.01:275,30,0	1/1:2,21:23:53.88:494,54,0	1/1:0,10:10:27.01:247,27,0	1/1:0,26:26:72.04:659,72,0	0/0:29,0:29:72.21:0,72,831	0/0:32,0:32:87.26:0,87,1001	0/0:7,0:7:21.06:0,21,242
chr10	23005802	.	ACTT	A	3630.26	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=12.290;DP=572;FS=2.025;HRun=0;HaplotypeScore=77.4785;InbreedingCoeff=0.9735;MQ=70.36;MQ0=0;MQRankSum=-0.628;QD=37.04;ReadPosRankSum=2.413;VQSLOD=4.5444;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:69.21:0,69,1448	1/1:0,7:7:18.06:285,18,0	0/0:12,0:12:32.94:0,33,635	0/0:2,0:2:6.02:0,6,87	0/0:36,0:36:99:0,105,2230	0/0:38,0:38:99:0,99,2072	0/0:7,0:7:18.05:0,18,353	0/0:35,0:35:96.29:0,96,1850	0/0:11,0:11:30.10:0,30,656	0/0:39,0:39:99:0,111,2321	0/0:30,0:30:90.29:0,90,1882	0/0:18,0:18:51.15:0,51,1036	0/0:26,0:26:75.26:0,75,1634	0/0:25,0:25:75.24:0,75,1591	0/0:25,0:25:69.20:0,69,1356	0/0:15,0:15:42.14:0,42,910	1/1:0,14:14:33.11:523,33,0	1/1:1,8:9:21.07:333,21,0	1/1:4,21:25:60.12:854,60,0	1/1:3,31:34:84.19:1255,84,0	1/1:1,8:9:24.08:380,24,0	0/0:18,0:18:45.15:0,45,984	0/0:21,0:21:60.20:0,60,1272	0/0:7,0:7:21.06:0,21,418	0/0:19,0:19:57.20:0,57,1244	0/0:25,0:25:75.24:0,75,1518	0/0:23,0:23:63.22:0,63,1377	0/0:16,0:16:48.16:0,48,1040
chr10	23007314	.	TGCGC	T	6050.31	PASS	AB=1.000;AC=37;AF=0.712;AN=52;BaseQRankSum=3.261;DP=497;FS=3.033;HRun=0;HaplotypeScore=106.6841;InbreedingCoeff=0.8280;MQ=57.39;MQ0=21;MQRankSum=-1.019;QD=20.37;ReadPosRankSum=1.625;VQSLOD=4.5009;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:33.77:0,34,485	1/1:7,0:7:9.03:116,9,0	0/0:35,0:14:35.17:0,35,522	0/0:41,0:11:20.21:0,20,393	1/1:31,0:32:72.23:1090,72,0	1/1:15,0:15:6.28:300,6,0	1/1:14,0:14:17.55:282,18,0	0/0:22,0:21:60.15:0,60,834	1/1:7,0:7:8.96:115,9,0	1/1:0,12:12:27.07:381,27,0	./.	1/1:11,0:11:21.07:278,21,0	1/1:16,0:16:39.07:538,39,0	1/1:15,0:14:3.01:39,3,0	1/1:20,0:20:18.06:270,18,0	1/1:21,0:21:3.01:40,3,0	1/1:19,0:19:3.01:39,3,0	1/1:12,0:12:36.09:498,36,0	1/1:1,16:17:48.15:709,48,0	./.	1/1:20,0:18:39.13:635,39,0	0/1:18,0:18:0:0,0,0	1/1:16,0:17:12.02:152,12,0	1/1:15,0:15:18.06:284,18,0	1/1:9,0:7:18.06:284,18,0	0/0:21,0:21:53.28:0,53,783	0/0:17,0:17:40.39:0,40,578	0/0:8,0:8:14.43:0,14,171
chr10	23007316	.	CGCGCGTGT	C	6337.90	PASS	AB=1.000;AC=39;AF=0.750;AN=52;BaseQRankSum=4.202;DP=490;FS=2.976;HRun=0;HaplotypeScore=125.6468;InbreedingCoeff=0.4223;MQ=55.17;MQ0=21;MQRankSum=-2.187;QD=18.32;ReadPosRankSum=2.080;VQSLOD=3.9637;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:29:28.25:28,0,434	1/1:0,0:7:9.03:171,9,0	0/0:33,0:13:35.17:0,35,522	0/0:40,0:10:20.21:0,20,393	1/1:32,0:32:71.71:1054,72,0	0/1:14,0:14:26.41:294,0,26	1/1:14,0:14:20.16:311,20,0	0/0:24,0:22:65.69:0,66,862	1/1:7,0:7:8.96:115,9,0	0/1:12,0:12:12.27:331,0,12	./.	1/1:10,1:11:21:285,21,0	1/1:17,0:17:41.97:542,42,0	1/1:2,0:14:3:27,3,0	1/1:17,0:19:18.06:330,18,0	1/1:0,0:21:3.01:67,3,0	1/1:0,0:18:3.01:39,3,0	1/1:12,0:12:36.06:488,36,0	1/1:17,0:17:48.14:705,48,0	./.	1/1:20,0:18:39.13:635,39,0	1/1:0,1:18:0.47:1,0,0	1/1:1,15:16:12.51:291,13,0	1/1:12,2:14:18.06:284,18,0	1/1:9,0:7:18.06:284,18,0	0/0:21,0:21:20.11:0,20,746	0/1:17,0:17:3.06:3,0,535	0/1:7,0:7:52.06:52,0,132
chr10	23007320	.	CGTGTGTGT	C	815.46	PASS	AB=1.000;AC=18;AF=0.450;AN=40;BaseQRankSum=3.120;DP=511;FS=16.463;HRun=0;HaplotypeScore=148.0806;InbreedingCoeff=0.4296;MQ=50.99;MQ0=27;MQRankSum=-3.563;QD=4.77;ReadPosRankSum=4.280;VQSLOD=1.7404;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:31:11.53:177,12,0	0/1:8,0:8:40.48:105,0,40	./.	./.	0/0:30,0:29:8.62:0,9,51	0/0:15,0:15:9.03:0,9,195	0/0:19,0:19:10.82:0,11,170	0/0:28,0:26:0.47:0,0,1	./.	0/0:15,0:14:6.02:0,6,125	./.	0/1:9,0:9:34.91:38,0,35	0/0:17,0:17:12.92:0,13,131	0/0:18,0:17:5.62:0,6,70	1/1:19,0:19:7.27:114,7,0	1/1:21,0:21:3.01:56,3,0	./.	0/0:13,0:11:0.47:0,0,1	./.	./.	./.	1/1:19,0:19:0.47:1,0,0	1/1:16,0:16:9.29:160,9,0	0/0:17,0:17:6.49:0,6,128	0/0:12,0:10:6.49:0,6,99	1/1:19,0:22:3.12:93,3,0	1/1:14,1:15:3.01:74,3,0	1/1:5,5:9:5.36:133,5,0
chr10	23007459	.	T	TACCTGCTGA	22416.33	PASS	AB=0.959;AC=37;AF=0.661;AN=56;BaseQRankSum=12.806;DP=527;FS=17.879;HRun=0;HaplotypeScore=389.8575;InbreedingCoeff=0.5858;MQ=83.17;MQ0=0;MQRankSum=-13.278;QD=59.78;ReadPosRankSum=3.351;VQSLOD=3.7033;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:81.26:0,81,2402	1/1:7,0:7:19.12:442,19,0	0/0:28,0:28:81.23:0,81,2342	0/0:25,0:25:69.23:0,69,1998	0/1:18,0:18:23.33:915,0,23	0/1:23,0:26:50.53:1446,0,51	1/1:23,0:23:14.94:1463,15,0	0/0:23,0:23:57.20:0,57,1802	1/1:23,0:23:49.94:1423,50,0	1/1:19,0:19:7.63:957,8,0	1/1:8,0:8:3.29:165,3,0	1/1:19,1:22:2.62:1406,3,0	0/1:23,0:26:21.07:1634,0,21	1/1:23,0:27:21.86:1805,22,0	1/1:25,0:25:35.99:2082,36,0	1/1:27,1:31:37.46:1905,37,0	1/1:16,0:16:11.90:1272,12,0	1/1:7,0:7:12.04:368,12,0	1/1:12,0:12:27.02:580,27,0	1/1:16,0:16:20.90:711,21,0	0/1:10,0:10:1.64:215,0,2	1/1:14,0:14:18.58:907,19,0	0/1:11,0:11:1.70:634,0,2	1/1:18,0:17:15.41:813,15,0	1/1:14,0:16:27.07:1276,27,0	0/0:14,0:14:42.13:0,42,1201	0/0:25,0:25:72.25:0,72,2163	0/0:7,0:7:21.07:0,21,632
chr10	23009844	.	CAT	C	302.56	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=5.586;DP=465;FS=9.665;HRun=0;HaplotypeScore=67.6156;InbreedingCoeff=0.4946;MQ=78.72;MQ0=2;MQRankSum=-0.824;QD=9.45;ReadPosRankSum=0.077;VQSLOD=2.3124;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,12:23:30.10:384,30,0	0/0:6,0:6:15.02:0,15,224	0/0:15,0:10:14.56:0,15,135	0/0:27,0:20:5.80:0,6,73	0/0:25,0:25:72.23:0,72,1170	0/0:18,0:18:54.18:0,54,903	0/0:11,0:11:30.09:0,30,477	0/0:34,0:34:90.30:0,90,1466	0/0:7,0:7:12.04:0,12,202	0/0:23,0:23:54.18:0,54,901	0/0:18,0:18:48.15:0,48,777	0/0:16,0:16:7.29:0,7,670	0/0:19,0:19:51.17:0,51,850	0/0:14,0:15:39.13:0,39,637	0/0:18,0:18:45.12:0,45,702	0/0:8,0:8:24.08:0,24,402	0/0:16,0:16:42.10:0,42,652	0/1:9,0:9:23.36:23,0,140	0/0:16,0:16:45.15:0,45,732	0/0:25,0:25:60.21:0,60,997	0/0:18,0:18:45.14:0,45,729	0/0:6,0:6:15.05:0,15,249	0/0:7,0:7:15.05:0,15,249	0/0:3,0:3:6.02:0,6,101	0/0:25,0:25:60.21:0,60,1008	0/0:27,0:27:63.21:0,63,1036	0/0:24,0:24:60.21:0,60,1000	0/0:5,0:5:15.05:0,15,253
chr10	23010208	.	TG	T	2434.56	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=9.869;DP=643;FS=9.632;HRun=4;HaplotypeScore=63.6095;InbreedingCoeff=0.9924;MQ=93.00;MQ0=0;MQRankSum=-2.314;QD=28.98;ReadPosRankSum=1.377;VQSLOD=3.1896;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:75.23:0,75,1029	1/1:0,6:6:15.05:180,15,0	0/0:30,0:30:72.21:0,72,969	0/0:25,0:25:60.16:0,60,795	0/0:22,0:22:66.21:0,66,905	0/0:36,0:36:99:0,105,1434	0/0:23,0:23:69.19:0,69,915	0/0:38,0:38:99:0,105,1398	0/0:22,0:22:63.21:0,63,880	0/0:22,0:22:63.21:0,63,882	0/0:20,0:20:60.20:0,60,838	0/0:28,0:28:84.28:0,84,1173	0/0:37,0:37:99:0,102,1427	0/0:25,0:25:75.22:0,75,1014	0/0:28,0:28:84.25:0,84,1155	0/0:36,0:36:99:0,108,1512	1/1:1,7:8:21.06:252,21,0	1/1:1,4:5:15.03:167,15,0	1/1:1,11:12:33.07:382,33,0	1/1:1,27:28:78.20:920,78,0	1/1:2,23:25:60.18:720,60,0	0/0:13,0:13:33.10:0,33,445	0/0:15,0:15:32.11:0,32,575	0/0:16,0:16:42.14:0,42,587	0/0:24,0:24:69.23:0,69,966	0/0:32,0:32:93.29:0,93,1281	0/0:30,0:30:90.30:0,90,1259	0/0:10,0:10:30.10:0,30,420
chr10	23010687	.	GT	G	6858.49	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=11.894;DP=623;FS=4.788;HRun=3;HaplotypeScore=71.2921;InbreedingCoeff=0.9986;MQ=87.06;MQ0=0;MQRankSum=-5.539;QD=33.62;ReadPosRankSum=0.149;VQSLOD=5.2413;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:42.10:0,42,580	1/1:1,9:10:24.08:297,24,0	0/0:24,0:24:60.19:0,60,833	0/0:18,0:18:54.18:0,54,758	0/0:35,0:35:99:0,102,1452	0/0:19,0:19:57.19:0,57,821	0/0:18,0:18:51.17:0,51,726	1/1:3,33:36:99:1203,99,0	0/0:23,0:23:69.21:0,69,974	0/0:15,0:15:45.15:0,45,636	0/0:22,0:22:63.19:0,63,862	0/0:30,0:30:87.26:0,87,1224	0/0:20,0:20:60.19:0,60,833	0/0:33,0:33:99:0,99,1423	0/0:36,0:36:99:0,105,1466	0/0:31,0:31:93.24:0,93,1305	1/1:0,15:15:45.14:558,45,0	1/1:0,8:8:21.07:260,21,0	1/1:3,25:28:75.22:917,75,0	1/1:0,21:21:54.17:667,54,0	1/1:1,26:27:75.24:930,75,0	0/0:20,0:20:60.20:0,60,863	0/0:20,0:20:57.18:0,57,802	0/0:17,0:17:51.16:0,51,715	0/0:24,0:24:72.21:0,72,999	1/1:1,22:23:26:762,26,0	1/1:0,28:28:78.25:966,78,0	1/1:0,8:8:24.08:297,24,0
chr10	23013263	.	T	TAATC	17032.44	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-13.680;DP=465;FS=3.756;HRun=0;HaplotypeScore=63.2573;InbreedingCoeff=0.9932;MQ=84.00;MQ0=0;MQRankSum=-3.405;QD=64.76;ReadPosRankSum=4.617;VQSLOD=6.9424;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:7:21.07:0,21,386	0/0:10,0:10:30.10:0,30,552	0/0:20,0:20:54.15:0,54,888	0/0:10,0:10:24.08:0,24,442	1/1:1,33:34:81.28:2058,81,0	1/1:3,23:26:66.23:1727,66,0	1/1:0,11:12:33.11:871,33,0	0/0:23,0:23:57.19:0,57,1032	1/1:0,13:13:30.10:792,30,0	1/1:3,21:24:63.22:1640,63,0	1/1:1,15:16:45.11:1128,45,0	1/1:3,14:17:45.15:1144,45,0	1/1:1,14:17:48.16:1264,48,0	1/1:2,17:19:51.17:1346,51,0	1/1:1,13:14:30.10:792,30,0	1/1:1,16:19:48.16:1267,48,0	0/0:16,0:16:45.15:0,45,819	0/0:12,0:12:24.08:0,24,441	0/0:21,0:21:60.19:0,60,1047	0/0:26,0:26:72.25:0,72,1302	0/0:8,0:8:24.08:0,24,442	1/1:0,7:7:15.05:396,15,0	1/1:0,13:13:30.10:790,30,0	1/1:0,8:8:14.79:396,15,0	1/1:3,21:24:54.19:1425,54,0	0/0:16,0:16:48.15:0,48,854	0/0:26,0:25:75.26:0,75,1373	0/0:7,0:7:21.07:0,21,386
chr10	23014435	.	TG	T	15016.97	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=12.210;DP=720;FS=5.745;HRun=3;HaplotypeScore=71.0766;InbreedingCoeff=0.9957;MQ=85.27;MQ0=0;MQRankSum=-3.257;QD=33.37;ReadPosRankSum=3.021;VQSLOD=5.5387;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,37:38:99:1312,108,0	0/0:13,0:13:39.13:0,39,562	0/0:26,0:26:72.21:0,72,964	0/0:23,0:23:53.13:0,53,717	1/1:0,24:24:66.21:816,66,0	1/1:1,29:30:84.26:1041,84,0	1/1:0,30:30:63.20:781,63,0	0/0:35,0:35:99:0,102,1452	1/1:0,29:29:81.25:1004,81,0	1/1:1,23:24:63.17:756,63,0	1/1:2,21:23:63.20:778,63,0	1/1:2,29:31:81.22:988,81,0	1/1:0,31:31:90.28:1116,90,0	1/1:0,25:25:63.20:781,63,0	1/1:0,34:34:99:1228,99,0	1/1:0,35:35:99:1228,99,0	0/0:25,0:25:72.22:0,72,1018	0/0:12,0:12:33.08:0,33,452	0/0:20,0:20:54.18:0,54,778	0/0:30,0:30:90.29:0,90,1279	0/0:18,0:18:51.17:0,51,733	1/1:2,28:30:81.25:996,81,0	1/1:2,23:25:66.21:818,66,0	1/1:0,18:18:51.16:632,51,0	1/1:1,22:23:60.19:743,60,0	0/0:34,0:34:99:0,102,1440	0/0:30,0:30:87.29:0,87,1247	0/0:4,0:4:12.04:0,12,171
chr10	23014938	.	G	GA	13898.66	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-8.112;DP=603;FS=0.000;HRun=9;HaplotypeScore=60.4977;InbreedingCoeff=0.9830;MQ=80.22;MQ0=0;MQRankSum=-5.106;QD=25.13;ReadPosRankSum=1.451;VQSLOD=5.4840;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:32.99:0,33,286	1/1:0,7:7:18.05:199,18,0	0/0:19,0:19:34.80:0,35,269	0/0:16,0:17:19.12:0,19,146	1/1:5,29:35:78.69:832,79,0	1/1:6,25:31:63.13:684,63,0	1/1:0,16:17:50.97:545,51,0	1/1:8,37:45:99:1089,105,0	1/1:2,16:19:44.99:479,45,0	1/1:0,15:15:39.09:423,39,0	1/1:3,22:25:63.09:670,63,0	1/1:4,15:20:47.95:502,48,0	1/1:4,22:26:57.15:630,57,0	1/1:6,24:30:69.19:763,69,0	1/1:2,21:24:56.99:612,57,0	1/1:7,21:29:60:645,60,0	1/1:2,18:20:51.13:557,51,0	1/1:4,10:14:30:300,30,0	1/1:2,24:26:70.02:740,70,0	1/1:4,20:24:37.04:612,37,0	1/1:1,16:17:36.10:398,36,0	1/1:4,12:16:33.01:338,33,0	1/1:7,21:28:66.93:764,67,0	1/1:2,9:11:27.07:299,27,0	1/1:4,16:20:39.11:431,39,0	1/1:3,20:23:37.10:616,37,0	1/1:3,23:26:37.11:638,37,0	1/1:0,5:5:12.03:133,12,0
chr10	23018037	.	A	ACTT	14734.50	PASS	AB=1.000;AC=51;AF=0.911;AN=56;BaseQRankSum=4.249;DP=396;FS=3.491;HRun=0;HaplotypeScore=255.1293;InbreedingCoeff=0.6597;MQ=62.01;MQ0=5;MQRankSum=-2.224;QD=42.34;ReadPosRankSum=1.760;VQSLOD=5.2625;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:19:34.13:0,34,393	1/1:7,0:7:17.98:244,18,0	0/0:25,0:13:8.09:0,8,420	0/1:20,0:15:9.52:10,0,149	1/1:12,2:16:36.09:561,36,0	1/1:22,0:22:66.19:1110,66,0	1/1:15,0:15:31.84:632,32,0	1/1:15,0:14:39.13:725,39,0	1/1:10,0:10:25.85:471,26,0	1/1:13,0:13:36.12:669,36,0	1/1:16,0:16:48.16:802,48,0	1/1:14,0:14:39.12:647,39,0	1/1:11,0:11:30.06:482,30,0	1/1:11,0:11:33.07:521,33,0	1/1:22,0:22:66.22:1120,66,0	1/1:15,0:15:45.13:755,45,0	1/1:9,0:8:18.06:292,18,0	1/1:5,0:5:12.04:214,12,0	1/1:8,0:8:6.02:112,6,0	1/1:18,0:18:53.67:893,54,0	1/1:7,0:7:14.39:170,14,0	1/1:17,0:17:51.13:828,51,0	1/1:11,0:11:33.01:455,33,0	1/1:11,0:11:15.12:269,15,0	1/1:20,0:20:60.10:954,60,0	1/1:8,0:8:24.08:458,24,0	1/1:26,0:26:78.22:1295,78,0	1/1:1,0:1:3.01:45,3,0
chr10	23019775	.	AACAC	A	2183.27	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=9.068;DP=332;FS=13.656;HRun=0;HaplotypeScore=54.0591;InbreedingCoeff=0.9074;MQ=91.27;MQ0=0;MQRankSum=-3.174;QD=38.30;ReadPosRankSum=1.720;VQSLOD=2.6122;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:57.08:0,57,1359	1/1:0,3:3:9.03:166,9,0	0/0:14,0:14:39.12:0,39,932	0/0:17,0:16:48.08:0,48,1069	0/0:17,0:17:51.16:0,51,1291	0/0:8,0:8:21.07:0,21,524	0/0:11,0:11:27.09:0,27,703	0/0:34,0:34:90.29:0,90,2123	0/0:6,0:6:18.06:0,18,442	0/0:8,0:8:24.08:0,24,618	0/0:8,0:8:24.08:0,24,605	0/0:8,0:8:24.08:0,24,633	0/0:15,0:15:39.13:0,39,1029	0/0:7,0:7:21.04:0,21,496	0/0:15,0:15:45.14:0,45,1085	0/0:12,0:12:33.10:0,33,809	1/1:1,19:20:48.11:845,48,0	1/1:2,11:13:0.22:414,0,0	1/1:1,7:8:18.03:269,18,0	1/1:0,8:8:24.08:441,24,0	1/1:1,4:5:12.04:220,12,0	0/0:5,0:5:15.05:0,15,396	0/0:5,0:5:12.04:0,12,316	0/0:5,0:5:15.05:0,15,388	0/0:8,0:8:24.08:0,24,602	0/0:17,0:17:45.15:0,45,1093	0/0:18,0:18:51.18:0,51,1346	0/0:14,0:14:36.03:0,36,948
chr10	23019838	.	G	GAATA	444.47	PASS	AB=1.000;AC=14;AF=0.438;AN=32;BaseQRankSum=-4.331;DP=205;FS=0.000;HRun=0;HaplotypeScore=50.9927;InbreedingCoeff=0.2972;MQ=72.59;MQ0=0;MQRankSum=1.331;QD=5.36;ReadPosRankSum=-0.444;VQSLOD=1.4612;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	1/1:9,1:10:3.01:69,3,0	1/1:4,2:6:6.02:139,6,0	./.	1/1:29,0:29:1.25:3,1,0	0/0:4,0:4:3.01:0,3,32	1/1:1,1:2:3.01:70,3,0	./.	./.	./.	1/1:5,3:8:6.02:139,6,0	0/0:11,0:11:6:0,6,54	0/0:9,0:9:9.01:0,9,84	0/0:14,0:14:9.01:0,9,83	0/0:9,0:9:3:0,3,28	0/0:10,0:10:2.88:0,3,15	./.	0/0:2,0:2:2.94:0,3,18	./.	./.	./.	1/1:5,1:6:3.01:69,3,0	0/0:12,0:12:12.02:0,12,118	0/1:12,0:12:57.26:57,0,80	0/1:10,0:10:12.97:13,0,56
chr10	23019861	.	TAAATAAATAAATAAATAAATAAATAAAC	T	1016.33	PASS	AC=4;AF=0.091;AN=44;BaseQRankSum=3.141;DP=165;FS=7.958;HRun=0;HaplotypeScore=128.4867;InbreedingCoeff=0.4769;MQ=49.92;MQ0=5;MQRankSum=-3.210;QD=39.09;ReadPosRankSum=2.767;VQSLOD=1.9448;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:29.31:0,29,1626	0/0:2,0:2:6.01:0,6,124	0/0:5,0:2:3:0,3,25	./.	0/0:4,0:4:9.03:0,9,584	0/0:6,0:6:18.06:0,18,1430	./.	0/0:39,0:37:96.31:0,96,4956	0/0:3,0:3:6.02:0,6,555	0/0:1,0:1:3.01:0,3,339	./.	0/0:1,0:1:3.01:0,3,213	0/0:2,0:2:6.02:0,6,381	0/0:4,0:4:9.03:0,9,897	1/1:5,8:13:6.02:446,6,0	1/1:3,10:13:9.03:669,9,0	0/0:13,0:13:18.06:0,18,715	0/0:9,0:9:24.08:0,24,1219	0/0:11,0:10:24.07:0,24,800	0/0:2,0:2:6.02:0,6,237	0/0:2,0:2:6.02:0,6,258	./.	./.	./.	0/0:3,0:3:9.03:0,9,691	0/0:4,0:4:12.04:0,12,1426	0/0:7,0:6:21.07:0,21,1845	0/0:6,0:6:18.06:0,18,1276
chr10	23019877	.	TAAATAAATAAAC	T	2527.12	PASS	AB=1.000;AC=34;AF=0.680;AN=50;BaseQRankSum=-5.237;DP=179;FS=4.658;HRun=0;HaplotypeScore=65.8894;InbreedingCoeff=-0.0883;MQ=53.82;MQ0=5;MQRankSum=2.158;QD=16.10;ReadPosRankSum=-3.494;VQSLOD=-0.1939;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:26.81:0,27,239	1/1:1,0:1:3:25,3,0	0/0:5,0:2:6.01:0,6,61	./.	0/1:5,0:5:81.94:82,0,118	0/1:7,0:7:52.92:53,0,382	1/1:2,0:2:3:25,3,0	0/1:35,0:33:99:398,0,546	0/1:3,0:3:15.98:16,0,165	0/1:3,0:3:46.96:47,0,120	1/1:4,0:4:11.99:100,12,0	1/1:2,0:2:1.49:22,1,0	0/1:4,0:4:61.95:62,0,91	0/0:4,0:4:5.89:0,6,264	1/1:8,0:8:6.02:182,6,0	1/1:10,0:10:9.03:272,9,0	1/1:2,10:12:9.03:334,9,0	1/1:7,1:8:17.88:231,18,0	1/1:12,0:11:32.89:352,33,0	1/1:8,0:8:20.98:175,21,0	1/1:3,0:3:4.64:40,5,0	1/1:1,0:1:3:25,3,0	./.	./.	0/1:4,0:4:37.95:38,0,216	0/1:5,0:5:11.94:12,0,575	0/1:12,0:11:99:115,0,535	0/1:8,0:8:75.92:76,0,391
chr10	23021027	.	G	GA	3185.79	PASS	AB=0.918;AC=18;AF=0.321;AN=56;BaseQRankSum=-9.804;DP=473;FS=0.476;HRun=8;HaplotypeScore=45.4346;InbreedingCoeff=0.8337;MQ=52.75;MQ0=10;MQRankSum=3.376;QD=19.91;ReadPosRankSum=-0.093;VQSLOD=3.0144;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:69.45:0,69,671	1/1:2,8:9:24.07:277,24,0	0/0:4,0:2:6:0,6,55	0/0:8,0:6:11.99:0,12,107	0/0:22,0:22:51.01:0,51,461	0/1:19,2:21:30.24:30,0,263	0/0:15,0:12:27:0,27,247	0/0:32,0:29:63.01:0,63,576	0/0:18,0:18:45.02:0,45,412	0/0:15,0:15:42.02:0,42,384	0/0:14,0:14:33.01:0,33,302	0/0:14,0:14:30.01:0,30,275	0/0:22,0:22:57.03:0,57,521	0/0:18,0:18:39.01:0,39,357	1/1:1,11:12:30.09:346,30,0	1/1:1,16:17:42.09:471,42,0	1/1:3,29:31:81.24:935,81,0	1/1:0,14:15:38.95:430,39,0	1/1:1,11:11:26.91:290,27,0	1/1:6,16:20:39.07:435,39,0	1/1:0,6:6:15.04:173,15,0	0/0:23,0:23:51.01:0,51,467	0/0:15,0:15:36:0,36,329	0/1:11,1:11:4.26:4,0,209	0/0:19,0:19:50.98:0,51,458	0/0:13,0:13:39.02:0,39,357	0/0:17,0:17:45:0,45,406	0/0:13,0:12:30.01:0,30,275
chr10	23021303	.	A	AC	5322.81	PASS	AB=0.795;AC=54;AF=0.964;AN=56;BaseQRankSum=4.144;DP=550;FS=0.000;HRun=2;HaplotypeScore=318.6240;InbreedingCoeff=-0.0321;MQ=76.47;MQ0=1;MQRankSum=-4.702;QD=9.68;ReadPosRankSum=3.267;VQSLOD=2.7814;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:42,0:42:92.49:421,92,0	1/1:6,0:6:14.22:52,14,0	0/1:17,3:21:8.67:178,0,9	0/1:14,3:21:3.79:166,0,4	1/1:22,0:22:39.76:180,40,0	1/1:19,0:19:43.15:175,43,0	1/1:16,0:16:37.37:173,37,0	1/1:13,0:13:33.35:146,33,0	1/1:20,0:20:49.30:182,49,0	1/1:20,0:20:46.03:181,46,0	1/1:13,0:13:21.61:76,22,0	1/1:21,0:21:49.83:218,50,0	1/1:26,0:26:60.10:255,60,0	1/1:23,0:23:54.51:212,55,0	1/1:23,0:23:58.93:256,59,0	1/1:34,0:33:75.53:310,76,0	1/1:19,0:18:39.30:184,39,0	1/1:6,0:6:16.48:80,16,0	1/1:16,0:16:38.58:164,39,0	1/1:19,0:17:34.92:170,35,0	1/1:7,0:7:10.99:69,11,0	1/1:30,0:30:70.14:345,70,0	1/1:15,0:15:33.59:132,34,0	1/1:16,0:16:24.82:109,25,0	1/1:24,0:23:56.59:235,57,0	1/1:22,0:22:58.97:265,59,0	1/1:29,0:28:71.34:289,71,0	1/1:7,0:7:19.57:97,20,0
chr10	23021433	.	T	TG	22034.52	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-10.633;DP=713;FS=3.263;HRun=4;HaplotypeScore=72.3216;InbreedingCoeff=0.9985;MQ=84.15;MQ0=0;MQRankSum=-6.244;QD=35.60;ReadPosRankSum=5.981;VQSLOD=4.7404;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,117,1301	1/1:0,13:13:36.12:492,36,0	0/0:25,0:25:56.16:0,56,614	0/0:25,0:24:66.09:0,66,724	1/1:3,27:30:75.25:1026,75,0	1/1:0,16:16:48.16:656,48,0	1/1:2,20:22:57.19:773,57,0	1/1:3,28:31:84.23:1107,84,0	1/1:3,25:28:75.25:1024,75,0	1/1:2,22:24:66.22:902,66,0	1/1:1,35:36:96.05:1312,96,0	1/1:5,19:24:54.18:732,54,0	1/1:2,19:21:51.17:697,51,0	1/1:1,25:26:72.24:984,72,0	1/1:2,26:28:78.26:1056,78,0	1/1:3,31:34:84.28:1148,84,0	1/1:2,25:27:60.20:821,60,0	1/1:1,15:16:42.07:551,42,0	1/1:1,26:27:78.26:1065,78,0	1/1:3,20:23:60.20:820,60,0	1/1:3,19:22:57.19:780,57,0	1/1:0,26:26:75.25:1025,75,0	1/1:4,24:28:69.21:914,69,0	1/1:2,16:18:51.15:672,51,0	1/1:1,28:29:81.27:1108,81,0	1/1:0,28:28:78.21:1063,78,0	1/1:4,29:32:75.25:1022,75,0	1/1:0,9:9:21.07:287,21,0
chr10	23021851	.	G	GTT	8514.63	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-3.176;DP=451;FS=20.921;HRun=8;HaplotypeScore=63.0314;InbreedingCoeff=0.9486;MQ=88.35;MQ0=3;MQRankSum=-2.758;QD=24.26;ReadPosRankSum=2.093;VQSLOD=2.5162;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:46.12:0,46,521	1/1:0,0:3:7.49:26,7,0	0/0:28,0:24:47.33:0,47,459	0/0:17,0:14:24.88:0,25,268	1/1:2,20:22:60.08:863,60,0	1/1:3,20:24:60.20:933,60,0	1/1:0,11:11:30.10:476,30,0	1/1:6,0:23:41.98:158,42,0	1/1:0,9:9:23.57:342,24,0	1/1:3,13:16:39.11:594,39,0	1/1:1,12:13:36.12:572,36,0	1/1:2,9:11:27.09:429,27,0	1/1:1,24:25:60.20:953,60,0	1/1:3,13:18:35.61:528,36,0	0/0:19,0:19:54.14:0,54,602	0/0:15,0:15:45.11:0,45,493	1/1:1,0:15:34.93:120,35,0	1/1:2,1:18:9.96:115,10,0	1/1:5,1:25:54.08:255,54,0	1/1:1,0:13:30.42:116,30,0	1/1:1,2:8:15.49:91,15,0	1/1:0,10:10:30.10:476,30,0	1/1:5,10:15:30.10:476,30,0	1/1:1,5:7:12.04:191,12,0	1/1:1,10:12:30.10:457,30,0	1/1:2,0:17:37.47:141,37,0	1/1:4,0:27:49.63:170,50,0	1/1:3,0:7:9.98:34,10,0
chr10	23022883	.	TAGCAGC	T	212.61	PASS	AB=1.000;AC=7;AF=0.184;AN=38;BaseQRankSum=1.050;DP=582;FS=2.199;HRun=0;HaplotypeScore=197.1410;InbreedingCoeff=0.5673;MQ=67.56;MQ0=8;MQRankSum=-5.642;QD=2.13;ReadPosRankSum=-5.951;VQSLOD=0.6362;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	1/1:7,0:7:8.80:52,9,0	./.	./.	./.	./.	0/0:17,0:17:17.92:0,18,286	0/0:18,0:16:5.92:0,6,39	0/0:31,0:31:18:0,18,545	0/0:21,0:21:2.97:0,3,20	./.	0/0:35,0:34:17.46:0,17,510	0/0:31,0:31:29.32:0,29,653	0/0:29,0:29:47.30:0,47,726	1/1:11,27:38:9.03:157,9,0	1/1:10,24:34:6.02:114,6,0	0/0:17,0:17:33.11:0,33,503	0/0:17,0:16:32.88:0,33,452	0/0:17,0:16:0:0,0,0	0/0:18,0:18:2.97:0,3,20	0/0:26,0:26:9.47:0,9,97	./.	./.	0/1:21,0:20:1.01:1,0,347	0/0:18,0:18:2.99:0,3,23	./.	0/0:29,0:29:16.54:0,17,623	0/0:4,0:4:5.95:0,6,58
chr10	23022919	.	CAGCAGCAGTAGTAGT	C	4590.51	PASS	AB=0.961;AC=31;AF=0.554;AN=56;BaseQRankSum=-4.380;DP=486;FS=42.012;HRun=0;HaplotypeScore=197.8160;InbreedingCoeff=-0.1195;MQ=47.06;MQ0=23;MQRankSum=-3.910;QD=12.58;ReadPosRankSum=-2.267;VQSLOD=2.0734;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:15:45.15:0,45,1079	1/1:6,0:6:11.99:207,12,0	0/0:11,0:3:7.53:0,8,61	0/0:14,0:2:3.01:0,3,31	1/1:10,0:9:5.82:147,6,0	1/1:11,0:10:5.72:93,6,0	0/1:16,0:16:99:171,0,225	0/1:11,0:6:25.62:69,0,26	0/1:20,8:28:91.56:92,0,373	1/1:17,0:16:7.79:417,8,0	1/1:8,0:6:9.03:223,9,0	0/1:18,12:29:93.88:94,0,350	0/1:34,0:34:99:398,0,441	0/1:29,0:29:99:356,0,558	0/0:33,0:32:5.12:0,5,569	0/0:39,0:39:29.86:0,30,1164	0/1:18,0:18:99:144,0,352	0/1:17,0:16:99:277,0,362	1/1:11,0:11:11.21:203,11,0	0/0:6,0:5:2.97:0,3,20	0/1:26,0:22:70.62:449,0,71	1/1:8,0:7:2.88:74,3,0	1/1:6,0:6:0.46:1,0,0	0/1:23,0:22:99:438,0,270	0/1:13,0:10:17.01:70,0,17	1/1:11,0:9:10.46:164,10,0	0/1:29,0:29:99:441,0,905	0/1:3,0:3:62.53:63,0,127
chr10	23022944	.	AGTAGTAG	A	5321.59	PASS	AB=0.968;AC=28;AF=0.500;AN=56;BaseQRankSum=10.448;DP=515;FS=1.242;HRun=0;HaplotypeScore=166.0505;InbreedingCoeff=-0.2733;MQ=50.43;MQ0=15;MQRankSum=0.319;QD=14.62;ReadPosRankSum=4.861;VQSLOD=4.0496;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:24:72.25:0,72,2086	0/1:4,1:5:19.84:107,0,20	0/0:30,0:15:43.70:0,44,776	0/0:26,0:16:45.10:0,45,1063	1/1:10,0:10:0.56:240,1,0	0/1:9,0:8:35.96:36,0,36	1/1:13,0:13:10.95:305,11,0	0/1:18,0:17:47.50:148,0,48	0/1:21,6:27:86.95:227,0,87	0/1:16,0:16:1.82:412,0,2	0/1:14,0:12:20.85:229,0,21	0/1:23,3:26:36.61:151,0,37	1/1:21,7:28:4.61:544,5,0	1/1:16,5:21:3.70:352,4,0	0/0:31,0:30:48.12:0,48,1137	0/0:38,0:38:61.41:0,61,1524	0/1:15,1:16:73.32:138,0,73	0/1:15,0:15:86.62:219,0,87	0/1:14,0:11:58.66:159,0,59	0/1:10,0:9:36.73:100,0,37	0/1:26,0:26:44.75:400,0,45	0/1:9,0:8:3.06:154,0,3	0/1:8,0:8:19.37:145,0,19	1/1:18,0:17:9.03:314,9,0	0/1:15,0:14:6.62:220,0,7	0/1:11,0:10:48.44:228,0,48	0/1:31,0:31:99:453,0,400	0/1:2,0:2:0.94:42,0,1
chr10	23023894	.	C	CT	2943.38	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=1.002;DP=645;FS=3.080;HRun=8;HaplotypeScore=63.2552;InbreedingCoeff=0.8983;MQ=72.70;MQ0=0;MQRankSum=-0.658;QD=28.86;ReadPosRankSum=0.223;VQSLOD=3.8835;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:63.02:0,63,576	0/0:11,0:11:30.02:0,30,274	0/0:13,0:13:24.67:0,25,210	0/0:7,0:7:11.97:0,12,102	0/0:33,0:33:86.99:0,87,784	0/0:21,1:22:28.41:0,28,515	0/0:12,0:12:24.01:0,24,219	1/1:5,26:31:75.22:866,75,0	0/0:16,0:16:42:0,42,379	0/0:43,0:43:96.02:0,96,876	0/0:41,0:41:99:0,108,988	0/0:21,0:21:48.01:0,48,439	0/0:26,0:26:72.04:0,72,659	0/0:22,0:22:57.03:0,57,522	0/0:25,0:25:66.03:0,66,604	0/0:24,0:24:57.02:0,57,520	0/0:18,0:18:48.02:0,48,439	0/0:22,0:22:56.98:0,57,513	0/0:19,0:19:54:0,54,484	0/0:35,0:35:99:0,99,896	0/0:11,0:11:0.86:0,1,242	0/0:22,0:22:51.01:0,51,467	0/0:30,0:30:81.03:0,81,737	0/0:17,0:17:45:0,45,407	0/0:27,0:27:66.02:0,66,604	1/1:3,24:27:75.12:847,75,0	1/1:1,41:41:99:1315,114,0	1/1:0,2:2:6.02:68,6,0
chr10	23024074	.	TA	T	1614.12	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.752;DP=667;FS=1.764;HRun=5;HaplotypeScore=60.5625;InbreedingCoeff=0.9972;MQ=77.46;MQ0=0;MQRankSum=-2.502;QD=27.83;ReadPosRankSum=0.806;VQSLOD=3.6335;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:45.09:0,45,578	0/0:7,0:7:21.07:0,21,287	0/0:15,0:15:45.15:0,45,615	0/0:13,0:13:39.12:0,39,506	0/0:38,1:39:80.32:0,80,1452	0/0:30,0:30:84.28:0,84,1149	0/0:23,0:23:63.20:0,63,845	0/0:30,0:30:87.27:0,87,1162	0/0:24,0:24:72.24:0,72,985	0/0:34,0:34:93.30:0,93,1259	0/0:33,0:33:93.30:0,93,1258	0/0:25,0:25:72.24:0,72,985	0/0:35,0:35:96.31:0,96,1299	0/0:22,0:22:66.22:0,66,903	1/1:2,30:32:81.23:919,81,0	1/1:0,26:26:72.21:817,72,0	0/0:16,0:16:45.12:0,45,594	0/0:27,0:27:78.16:0,78,1005	0/0:11,0:11:27.09:0,27,369	0/0:23,0:23:66.22:0,66,902	0/0:29,0:29:81.26:0,81,1093	0/0:20,0:20:57.19:0,57,780	0/0:26,0:26:78.26:0,78,1067	0/0:11,0:11:33.11:0,33,451	0/0:17,0:17:48.14:0,48,639	0/0:29,0:29:78.26:0,78,1067	0/0:42,0:42:99:0,120,1624	0/0:13,0:13:39.13:0,39,533
chr10	23024212	.	A	AG	23896.39	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-8.727;DP=650;FS=2.833;HRun=1;HaplotypeScore=59.9429;InbreedingCoeff=0.9850;MQ=75.31;MQ0=0;MQRankSum=-3.967;QD=41.56;ReadPosRankSum=1.703;VQSLOD=5.5031;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:27.09:0,27,351	1/1:0,18:18:45.15:675,45,0	0/0:11,0:11:27.01:0,27,340	0/0:12,0:12:32.46:0,32,386	1/1:1,34:35:96.28:1414,96,0	1/1:0,30:30:81.27:1214,81,0	1/1:1,23:24:60.20:899,60,0	1/1:0,28:28:81.25:1172,81,0	1/1:0,14:14:42.14:629,42,0	1/1:0,46:46:99:2044,138,0	1/1:0,35:35:99:1484,99,0	1/1:0,26:26:69.23:1034,69,0	1/1:0,26:26:75.25:1124,75,0	1/1:0,20:20:57.19:854,57,0	0/0:24,0:24:72.23:0,72,935	0/0:18,0:18:54.16:0,54,687	1/1:0,20:20:54.18:808,54,0	1/1:2,11:13:33.11:495,33,0	1/1:0,12:12:36.12:539,36,0	1/1:1,39:40:99:1708,114,0	1/1:1,13:14:36.12:540,36,0	1/1:1,21:22:57.19:854,57,0	1/1:1,38:39:99:1619,108,0	1/1:1,7:8:21.07:315,21,0	1/1:0,25:25:66.22:989,66,0	1/1:0,30:30:90.28:1327,90,0	1/1:0,46:46:99:2023,135,0	1/1:1,3:4:9.03:135,9,0
chr10	23025954	.	GTACA	G	323.01	PASS	AB=0.939;AC=9;AF=0.161;AN=56;BaseQRankSum=4.649;DP=379;FS=8.704;HRun=0;HaplotypeScore=73.5391;InbreedingCoeff=-0.1997;MQ=58.80;MQ0=9;MQRankSum=1.227;QD=2.63;ReadPosRankSum=-1.333;VQSLOD=0.5452;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:24:32.83:0,33,256	0/0:2,0:4:2.97:0,3,20	0/0:13,0:4:8.82:0,9,81	0/1:13,0:4:2.32:2,0,38	0/0:9,0:9:20.93:0,21,201	0/0:15,0:15:30:0,30,378	0/0:11,0:11:3.98:0,4,190	0/0:17,0:17:44.64:0,45,339	0/0:11,0:10:15.49:0,15,225	0/0:11,0:12:36.04:0,36,474	0/0:12,0:12:18.03:0,18,264	0/0:16,0:16:26.98:0,27,287	0/0:11,0:11:22.72:0,23,250	0/0:18,0:18:44.84:0,45,654	0/0:17,0:17:26.77:0,27,211	0/1:12,2:13:27.14:27,0,175	0/1:22,1:22:94.44:94,0,223	0/1:11,1:12:61.28:112,0,61	0/1:17,0:16:19.31:19,0,219	0/1:6,0:6:18.46:18,0,34	0/1:23,0:20:15.80:16,0,120	0/0:9,0:9:24.01:0,24,343	0/0:12,0:12:20.99:0,21,261	0/0:17,0:17:24:0,24,315	0/0:14,0:14:30.05:0,30,494	0/0:14,0:14:41.77:0,42,357	0/1:5,4:9:95.72:96,0,120	0/1:6,0:6:29.08:72,0,29
chr10	23025955	.	TACAC	T	760.16	PASS	AB=0.869;AC=17;AF=0.370;AN=46;BaseQRankSum=-2.105;DP=402;FS=3.239;HRun=0;HaplotypeScore=77.1388;InbreedingCoeff=0.4717;MQ=55.26;MQ0=9;MQRankSum=0.425;QD=5.43;ReadPosRankSum=-0.835;VQSLOD=1.8542;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	0/0:9,0:10:3.01:0,3,52	0/0:13,0:20:9.03:0,9,171	0/0:13,0:13:9.03:0,9,166	0/0:17,0:17:0.47:0,0,1	0/1:6,0:10:5.73:6,0,125	0/0:14,0:14:21.03:0,21,407	0/0:7,0:14:9.75:0,10,151	0/0:11,0:17:6.49:0,6,110	0/0:6,0:12:6.02:0,6,104	0/0:20,0:20:24.04:0,24,417	0/1:10,0:17:0:0,0,0	1/1:13,0:13:3.48:46,3,0	1/1:15,7:22:5.63:218,6,0	1/1:9,4:14:2.59:173,3,0	1/1:14,3:17:12:141,12,0	1/1:2,4:6:3.01:46,3,0	1/1:14,8:19:3.01:46,3,0	0/0:9,0:10:9.03:0,9,163	0/0:9,0:15:8.94:0,9,167	0/0:11,0:19:12.04:0,12,220	0/0:14,0:14:21.07:0,21,413	./.	0/1:8,1:9:75.01:94,0,75	1/1:3,3:6:4.16:132,4,0
chr10	23026379	.	C	CA	12407.67	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-8.483;DP=472;FS=5.732;HRun=8;HaplotypeScore=39.5177;InbreedingCoeff=0.9011;MQ=83.95;MQ0=0;MQRankSum=-4.150;QD=28.99;ReadPosRankSum=2.764;VQSLOD=4.8581;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:42.02:0,42,384	1/1:0,8:8:24.07:277,24,0	0/0:15,0:15:26.99:0,27,241	0/0:14,0:14:5:0,5,176	1/1:5,9:14:7.81:276,8,0	1/1:4,19:24:57:638,57,0	1/1:2,18:20:51.15:589,51,0	1/1:5,25:30:75.21:855,75,0	1/1:0,6:6:18.05:208,18,0	1/1:2,23:25:72.19:819,72,0	1/1:2,21:23:57.17:657,57,0	1/1:3,5:8:12.04:139,12,0	1/1:8,10:18:39.12:450,39,0	1/1:3,21:24:63.19:727,63,0	1/1:3,20:23:57.17:658,57,0	1/1:0,15:15:42.12:485,42,0	1/1:1,24:25:63.19:727,63,0	1/1:1,7:8:21.06:242,21,0	1/1:2,11:13:36.09:402,36,0	1/1:5,17:23:53.99:603,54,0	1/1:0,5:5:12.04:138,12,0	1/1:3,17:20:26.69:561,27,0	1/1:0,19:19:57.17:658,57,0	1/1:2,10:12:30.09:346,30,0	1/1:0,17:17:48.06:536,48,0	1/1:5,18:23:57.17:655,57,0	1/1:0,12:12:36.11:415,36,0	1/1:0,13:13:30.09:346,30,0
chr10	23026577	.	C	CTA	2073.03	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-8.817;DP=616;FS=14.574;HRun=0;HaplotypeScore=71.0273;InbreedingCoeff=0.9426;MQ=84.07;MQ0=0;MQRankSum=-1.887;QD=42.31;ReadPosRankSum=2.717;VQSLOD=4.3248;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:66.20:0,66,844	0/0:2,0:2:6.02:0,6,78	0/0:22,0:22:38.15:0,38,473	0/0:21,0:21:38.81:0,39,442	0/0:28,0:28:78.25:0,78,1014	0/0:29,0:29:69.22:0,69,897	0/0:15,0:15:39.13:0,39,507	0/0:31,0:31:81.26:0,81,1054	0/0:15,0:15:39.13:0,39,507	0/0:29,0:29:81.25:0,81,1042	0/0:25,0:25:69.22:0,69,884	0/0:19,0:19:54.18:0,54,702	0/0:35,0:35:90.29:0,90,1170	0/0:24,0:24:63.16:0,63,798	1/1:2,23:25:63.22:1072,63,0	1/1:1,23:24:66.23:1123,66,0	0/0:34,0:34:84.25:0,84,1075	0/0:9,0:9:18.04:0,18,217	0/0:16,0:16:39.10:0,39,479	0/0:29,0:29:72.22:0,72,921	0/0:16,0:16:42.14:0,42,546	0/0:19,0:19:51.15:0,51,648	0/0:24,0:24:66.19:0,66,830	0/0:19,0:19:54.18:0,54,701	0/0:25,0:25:66.21:0,66,856	0/0:25,0:25:69.20:0,69,871	0/0:26,0:26:72.23:0,72,935	0/0:7,0:7:21.07:0,21,273
chr10	23027029	.	AT	A	8828.56	PASS	AB=0.818;AC=53;AF=0.946;AN=56;BaseQRankSum=-3.609;DP=553;FS=16.275;HRun=11;HaplotypeScore=69.2468;InbreedingCoeff=0.6163;MQ=68.57;MQ0=0;MQRankSum=-4.107;QD=16.44;ReadPosRankSum=4.016;VQSLOD=4.1386;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,16:16:41.95:345,42,0	1/1:2,8:10:23.96:197,24,0	0/0:16,0:14:24.01:0,24,236	0/1:7,2:9:11.75:12,0,126	1/1:7,28:35:77.77:632,78,0	1/1:2,20:22:18.95:362,19,0	1/1:2,7:9:9.07:158,9,0	1/1:9,0:35:48.66:143,49,0	1/1:2,11:13:17.98:148,18,0	1/1:4,23:27:68.88:563,69,0	1/1:1,18:19:41.93:345,42,0	1/1:2,17:19:50.93:419,51,0	1/1:3,19:22:56.92:468,57,0	1/1:2,13:15:39.41:322,39,0	1/1:2,17:19:50.94:419,51,0	1/1:2,21:23:59.93:493,60,0	1/1:2,20:22:48.82:415,49,0	1/1:5,6:11:20.92:168,21,0	1/1:0,20:20:59.93:493,60,0	1/1:5,37:43:99:812,101,0	1/1:3,20:23:53.93:443,54,0	1/1:1,17:18:41.91:345,42,0	1/1:4,18:22:18.97:362,19,0	1/1:0,8:8:23.97:197,24,0	1/1:1,17:18:35.60:292,36,0	1/1:2,1:20:31.97:109,32,0	1/1:3,0:31:46.84:138,47,0	1/1:2,0:8:10.17:30,10,0
chr10	23027624	.	GACAGACAC	G	525.95	PASS	AB=0.600;AC=1;AF=0.018;AN=56;BaseQRankSum=4.743;DP=662;FS=7.209;HRun=0;HaplotypeScore=162.8571;InbreedingCoeff=0.0406;MQ=75.72;MQ0=4;MQRankSum=-4.936;QD=29.22;ReadPosRankSum=-0.228;VQSLOD=2.7160;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:6,12:18:14.88:600,0,15	0/0:11,0:11:30.10:0,30,1127	0/0:46,0:33:59.52:0,60,1648	0/0:49,0:40:69.24:0,69,2222	0/0:31,0:31:84.29:0,84,3284	0/0:31,0:31:87.30:0,87,3513	0/0:15,0:15:33.11:0,33,1318	0/0:42,0:42:84.16:0,84,2681	0/0:18,0:18:45.15:0,45,1910	0/0:12,0:12:36.12:0,36,1489	0/0:25,0:25:69.24:0,69,2701	0/0:27,0:27:63.20:0,63,2450	0/0:24,0:24:69.24:0,69,2875	0/0:26,0:26:69.24:0,69,2737	0/0:28,0:28:72.25:0,72,2476	0/0:25,0:25:66.23:0,66,2617	0/0:9,0:9:15.05:0,15,509	0/0:14,0:13:27.09:0,27,889	0/0:23,0:23:48.16:0,48,1625	0/0:19,0:19:54.19:0,54,2117	0/0:22,0:22:48.15:0,48,1684	0/0:20,0:20:57.20:0,57,2307	0/0:14,0:14:42.14:0,42,1711	0/0:15,0:15:39.09:0,39,1366	0/0:23,0:23:60.21:0,60,2494	0/0:24,0:24:69.17:0,69,2648	0/0:40,0:39:99:0,105,3831	0/0:10,0:10:24.08:0,24,962
chr10	23027965	.	T	TA	13756.86	PASS	AB=1.000;AC=47;AF=0.839;AN=56;BaseQRankSum=4.410;DP=576;FS=5.118;HRun=9;HaplotypeScore=77.2046;InbreedingCoeff=0.8796;MQ=66.70;MQ0=0;MQRankSum=-3.546;QD=26.46;ReadPosRankSum=1.148;VQSLOD=5.3422;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:41.96:0,42,358	1/1:1,9:10:27.07:299,27,0	0/0:8,0:7:14.97:0,15,128	0/1:6,0:6:7.65:8,0,63	1/1:7,28:35:61.15:888,61,0	1/1:4,20:24:51.14:564,51,0	1/1:2,13:15:36.10:398,36,0	1/1:9,37:46:99:1154,106,0	1/1:3,19:22:57.12:618,57,0	1/1:3,23:26:66.18:730,66,0	1/1:7,22:29:48.94:749,49,0	1/1:4,17:21:51.14:564,51,0	1/1:2,35:37:79.25:1102,79,0	1/1:5,14:19:39.11:430,39,0	0/0:16,0:16:38.97:0,39,335	0/0:17,0:17:41.95:0,42,357	1/1:0,9:9:27.07:299,27,0	1/1:1,12:13:33.09:365,33,0	1/1:4,25:29:75.20:830,75,0	1/1:2,26:28:69.19:763,69,0	1/1:0,5:5:15.04:166,15,0	1/1:3,14:17:42.11:465,42,0	1/1:2,14:16:42.11:465,42,0	1/1:0,9:9:27.07:299,27,0	1/1:2,25:28:69.02:744,69,0	1/1:6,22:28:66.18:730,66,0	1/1:2,25:27:69.19:763,69,0	1/1:7,14:21:33.09:365,33,0
chr10	23029748	.	GTGATGA	G	2004.76	PASS	AB=0.764;AC=17;AF=0.340;AN=50;BaseQRankSum=8.407;DP=749;FS=4.918;HRun=0;HaplotypeScore=159.7177;InbreedingCoeff=0.6204;MQ=67.44;MQ0=10;MQRankSum=-5.409;QD=7.43;ReadPosRankSum=0.467;VQSLOD=2.5630;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:18,0:36:31.81:103,0,32	1/1:6,8:14:3.90:40,4,0	./.	./.	0/0:31,0:31:51.02:0,51,1258	0/1:25,3:28:26.18:26,0,819	0/0:34,0:34:21.51:0,22,386	./.	0/0:21,0:21:24.08:0,24,651	0/0:35,0:32:24.08:0,24,708	0/0:19,0:20:21:0,21,504	0/0:32,0:32:47.83:0,48,1335	0/0:28,0:28:39.13:0,39,1121	0/0:30,0:31:51.14:0,51,1311	0/1:19,12:31:11.60:253,0,12	1/1:21,12:34:36.12:653,36,0	1/1:13,9:22:3.01:59,3,0	1/1:17,5:22:1.48:57,1,0	1/1:12,9:20:26.51:435,27,0	1/1:11,10:21:27.02:422,27,0	1/1:31,10:40:8.96:130,9,0	0/0:19,0:19:30.10:0,30,888	0/0:27,0:27:21.07:0,21,598	0/0:34,0:34:36.04:0,36,917	0/0:23,0:23:33.04:0,33,901	0/0:31,0:30:32.96:0,33,829	0/0:28,0:27:41.94:0,42,1054	0/0:16,0:15:33.06:0,33,768
chr10	23030141	.	GA	G	10168.67	PASS	AB=0.994;AC=44;AF=0.786;AN=56;BaseQRankSum=0.684;DP=640;FS=7.096;HRun=8;HaplotypeScore=96.5436;InbreedingCoeff=0.3928;MQ=69.31;MQ0=1;MQRankSum=-1.220;QD=17.72;ReadPosRankSum=8.126;VQSLOD=3.9826;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:29:99:106,0,114	1/1:2,12:14:33.05:318,33,0	0/1:26,1:21:13.93:14,0,222	0/0:17,0:16:16.81:0,17,203	1/1:0,30:30:90.15:868,90,0	1/1:1,25:26:66.11:636,66,0	1/1:1,13:14:33.05:318,33,0	0/1:35,0:35:79.11:122,0,79	1/1:4,13:17:30.04:289,30,0	1/1:5,26:32:80.12:749,80,0	1/1:4,23:27:57.02:539,57,0	1/1:2,13:15:39.06:375,39,0	1/1:2,24:26:63.10:605,63,0	1/1:3,12:15:30.05:289,30,0	0/0:27,0:27:63.16:0,63,727	0/0:20,0:21:57.01:0,57,634	1/1:2,28:30:78.13:752,78,0	1/1:1,11:12:33.05:318,33,0	1/1:2,18:20:54.03:499,54,0	1/1:0,31:31:84.04:797,84,0	1/1:3,5:8:12.02:116,12,0	1/1:1,26:27:69.10:663,69,0	1/1:3,21:24:54.08:521,54,0	1/1:0,17:17:45.07:434,45,0	1/1:1,25:26:54.09:521,54,0	0/1:28,0:28:4.65:181,0,5	0/1:32,0:32:99:129,0,127	0/1:12,0:12:9.91:10,0,52
chr10	23030153	.	C	CA	3742.22	PASS	AB=0.615;AC=9;AF=0.161;AN=56;BaseQRankSum=0.871;DP=661;FS=6.902;HRun=8;HaplotypeScore=119.8728;InbreedingCoeff=0.8286;MQ=68.88;MQ0=1;MQRankSum=-7.702;QD=26.73;ReadPosRankSum=-4.638;VQSLOD=1.1952;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:5,24:29:72.13:801,72,0	0/0:13,0:13:36.02:0,36,329	0/0:25,0:19:8.30:0,8,193	0/0:18,0:16:6.63:0,7,236	0/0:37,0:38:86.06:0,86,775	0/0:26,0:26:63.03:0,63,577	0/0:14,0:14:29.99:0,30,269	1/1:13,29:42:87.26:1004,87,0	0/0:15,0:15:45.01:0,45,406	0/0:32,0:32:87.03:0,87,792	0/0:26,0:26:68.07:0,68,610	0/0:18,0:18:45:0,45,407	0/0:30,0:30:81:0,81,733	0/0:16,0:16:36.01:0,36,329	0/0:28,0:28:78.02:0,78,708	0/0:25,0:25:69.04:0,69,631	0/0:29,0:29:75.03:0,75,686	0/0:11,0:11:33.02:0,33,302	0/0:22,0:22:54.02:0,54,494	0/0:33,0:33:78.02:0,78,714	0/0:6,0:6:15.01:0,15,137	0/0:31,0:31:81.03:0,81,741	0/0:27,0:27:57:0,57,517	0/0:17,0:17:45.02:0,45,412	0/0:21,0:21:48.01:0,48,433	1/1:2,25:27:75.22:866,75,0	1/1:5,29:34:84.21:951,84,0	0/1:3,5:8:22.60:121,0,23
chr10	23031019	.	A	ATATG	15633.48	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-4.629;DP=248;FS=0.000;HRun=0;HaplotypeScore=36.1249;InbreedingCoeff=0.8902;MQ=66.85;MQ0=1;MQRankSum=-4.819;QD=70.11;ReadPosRankSum=2.436;VQSLOD=6.6477;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,6:6:18.06:485,18,0	1/1:0,2:2:6.02:162,6,0	0/0:8,0:6:15.05:0,15,285	0/0:6,0:5:9.03:0,9,162	1/1:2,9:11:15.05:405,15,0	1/1:1,14:16:45.15:1165,45,0	1/1:1,7:9:18.06:485,18,0	1/1:2,9:11:30.10:782,30,0	1/1:1,5:6:15.05:386,15,0	1/1:3,13:16:45.15:1170,45,0	1/1:0,8:8:24.08:601,24,0	1/1:2,5:8:21.07:556,21,0	1/1:1,5:6:15.05:404,15,0	1/1:0,8:8:24.08:627,24,0	0/0:6,0:6:18.06:0,18,341	0/0:5,0:5:15.05:0,15,285	1/1:0,14:14:42.14:1132,42,0	1/1:1,8:9:24.08:647,24,0	1/1:1,5:6:15.03:342,15,0	1/1:0,12:12:36.12:915,36,0	1/1:0,13:13:36.12:952,36,0	1/1:0,2:2:6.02:162,6,0	1/1:1,7:8:21.07:544,21,0	1/1:1,8:9:24.08:648,24,0	1/1:0,10:10:24.08:629,24,0	1/1:3,7:10:30.10:760,30,0	1/1:0,14:14:42.14:1132,42,0	1/1:4,5:9:21.07:544,21,0
chr10	23032505	.	T	TCAGGAGG	18560.13	PASS	AB=0.971;AC=39;AF=0.696;AN=56;BaseQRankSum=-5.698;DP=481;FS=73.868;HRun=0;HaplotypeScore=126.7268;InbreedingCoeff=0.8672;MQ=92.97;MQ0=0;MQRankSum=-16.009;QD=67.74;ReadPosRankSum=4.072;VQSLOD=2.3275;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:87.30:0,87,2159	1/1:2,6:8:21.07:815,21,0	0/0:29,0:29:66.22:0,66,1537	0/0:24,0:24:60.21:0,60,1423	1/1:4,16:21:39.13:1513,39,0	1/1:5,9:18:33.11:1239,33,0	1/1:4,6:11:21.07:815,21,0	0/0:40,0:40:96.32:0,96,2301	1/1:1,2:3:9.03:306,9,0	1/1:7,12:20:51.17:1844,51,0	1/1:7,14:22:39.13:1511,39,0	1/1:2,9:13:27.09:1049,27,0	1/1:3,6:12:18.06:698,18,0	1/1:1,6:8:21.07:770,21,0	0/0:20,0:20:57.15:0,57,1241	0/0:23,0:23:63.22:0,63,1547	1/1:1,9:15:24.08:932,24,0	1/1:0,1:3:3.01:117,3,0	1/1:6,3:11:27.09:842,27,0	1/1:4,10:16:27.09:1047,27,0	1/1:2,2:7:12.04:459,12,0	1/1:0,6:7:15.05:578,15,0	1/1:5,11:19:32.81:1220,33,0	1/1:1,5:7:18.06:698,18,0	1/1:5,12:19:51.18:1963,51,0	0/1:33,1:34:99:143,0,1848	0/0:29,0:29:72.23:0,72,1719	0/0:10,0:10:24.08:0,24,572
chr10	23034306	.	C	CT	3562.34	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-11.301;DP=659;FS=11.947;HRun=0;HaplotypeScore=60.8006;InbreedingCoeff=0.9678;MQ=64.73;MQ0=1;MQRankSum=-2.040;QD=43.98;ReadPosRankSum=-0.909;VQSLOD=2.7738;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,145,1970	0/0:8,0:8:24.05:0,24,300	0/0:26,0:23:60.45:0,60,792	0/0:23,0:21:57.16:0,57,769	0/0:25,0:25:75.20:0,75,1025	0/0:30,0:30:87.26:0,87,1182	0/0:7,0:7:21.07:0,21,293	1/1:1,26:24:72.25:1140,72,0	0/0:24,0:24:69.23:0,69,958	0/0:13,0:13:39.13:0,39,545	0/0:18,0:18:51.17:0,51,711	0/0:24,0:24:69.20:0,69,930	0/0:26,0:26:75.23:0,75,1031	0/0:35,0:34:99:0,99,1368	0/0:23,0:23:69.19:0,69,904	0/0:16,0:16:48.16:0,48,671	0/0:30,0:30:90.22:0,90,1216	0/0:30,0:30:84.26:0,84,1146	0/0:25,0:24:69.22:0,69,936	0/0:20,0:20:60.19:0,60,822	0/0:45,0:45:99:0,132,1843	0/0:13,0:13:39.12:0,39,528	0/0:8,0:8:24.07:0,24,320	0/0:33,0:33:93.31:0,93,1299	0/0:26,0:26:78.25:0,78,1073	1/1:0,25:25:75.26:1200,75,0	1/1:0,26:26:72.25:1151,72,0	1/1:2,1:3:6:72,6,0
chr10	23035105	.	G	GC	4243.79	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-12.387;DP=762;FS=4.967;HRun=0;HaplotypeScore=72.7233;InbreedingCoeff=0.9926;MQ=66.54;MQ0=0;MQRankSum=-0.254;QD=43.75;ReadPosRankSum=-1.366;VQSLOD=4.6971;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,105,1449	0/0:9,0:9:27.09:0,27,378	0/0:23,0:21:60.14:0,60,775	0/0:25,0:25:62.98:0,63,856	0/0:33,0:33:99:0,99,1384	0/0:23,1:24:24.45:0,24,917	0/0:24,0:24:72.21:0,72,972	1/1:2,31:33:93.32:1487,93,0	0/0:25,0:25:75.25:0,75,1048	0/0:40,0:40:99:0,117,1636	0/0:16,0:16:48.15:0,48,654	0/0:36,0:36:99:0,105,1469	0/0:30,0:30:87.27:0,87,1197	0/0:25,0:25:75.25:0,75,1048	0/0:40,0:40:99:0,120,1661	0/0:47,0:47:99:0,132,1846	0/0:17,0:17:51.16:0,51,696	0/0:22,1:22:18.25:0,18,813	0/0:27,0:27:81.26:0,81,1112	0/0:33,0:33:96.31:0,96,1325	0/0:34,0:34:99:0,102,1427	0/0:18,0:18:51.17:0,51,713	0/0:25,0:25:75.22:0,75,1027	0/0:26,0:26:78.26:0,78,1090	0/0:25,0:25:75.23:0,75,1029	1/1:1,28:29:45.30:1277,45,0	1/1:1,28:30:78.27:1240,78,0	1/1:0,5:5:15.05:240,15,0
chr10	23035561	.	CT	C	3449.07	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=10.844;DP=727;FS=7.356;HRun=7;HaplotypeScore=73.5761;InbreedingCoeff=0.9999;MQ=59.92;MQ0=1;MQRankSum=-1.908;QD=24.99;ReadPosRankSum=-1.011;VQSLOD=3.7513;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:63.20:0,63,792	0/0:15,0:15:42.11:0,42,512	0/0:29,0:24:56.53:0,57,661	0/0:20,0:15:33.10:0,33,408	0/0:35,0:35:99:0,99,1243	0/0:26,0:26:75.23:0,75,930	0/0:18,0:18:51.16:0,51,641	1/1:4,39:43:99:1120,114,0	0/0:18,0:18:54.17:0,54,680	0/0:25,0:25:72.22:0,72,895	0/0:25,0:25:69.21:0,69,856	0/0:15,0:15:42.13:0,42,526	0/0:25,0:25:72.23:0,72,906	0/0:24,0:24:69.22:0,69,868	0/0:23,0:23:60.19:0,60,755	0/0:31,0:31:90.27:0,90,1108	0/0:33,0:33:93.28:0,93,1155	0/0:32,0:32:93.30:0,93,1170	0/0:26,0:25:69.17:0,69,819	0/0:27,0:27:72.22:0,72,893	0/0:20,0:20:57.18:0,57,717	0/0:30,0:30:78.25:0,78,980	0/0:25,0:25:63.20:0,63,793	0/0:26,0:26:75.24:0,75,939	0/0:18,0:18:42.13:0,42,528	1/1:5,34:39:67.42:983,67,0	1/1:2,35:37:87.19:888,87,0	1/1:3,16:19:45.10:459,45,0
chr10	23037823	.	GGTGTGTGT	G	412.68	PASS	AB=0.866;AC=12;AF=0.300;AN=40;BaseQRankSum=1.780;DP=542;FS=4.952;HRun=0;HaplotypeScore=135.0238;InbreedingCoeff=0.3263;MQ=69.43;MQ0=19;MQRankSum=-2.285;QD=2.75;ReadPosRankSum=0.952;VQSLOD=2.5055;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:42.11:0,42,1210	0/0:5,0:7:9.03:0,9,142	./.	./.	./.	0/0:13,0:14:9.03:0,9,128	./.	0/0:27,0:26:8.94:0,9,65	0/1:8,2:11:0:0,0,0	./.	./.	0/1:15,0:16:15.42:49,0,15	./.	1/1:13,1:14:3.01:74,3,0	0/1:16,0:18:14.49:14,0,59	1/1:17,0:17:3.35:16,3,0	0/1:20,0:22:19.89:20,0,359	0/0:10,0:10:7.27:0,7,105	0/0:22,0:21:5.98:0,6,48	0/0:11,0:13:2.84:0,3,46	0/0:34,0:32:27.05:0,27,520	./.	0/0:15,0:15:3.01:0,3,48	1/1:30,3:33:15.04:293,15,0	1/1:12,5:17:3.01:74,3,0	0/0:19,0:17:26.28:0,26,420	0/0:29,0:28:22.32:0,22,573	0/0:12,0:11:9.03:0,9,249
chr10	23037868	.	G	GTGTA	932.27	PASS	AB=0.806;AC=6;AF=0.107;AN=56;BaseQRankSum=-2.193;DP=625;FS=17.847;HRun=0;HaplotypeScore=110.5853;InbreedingCoeff=0.6003;MQ=52.46;MQ0=44;MQRankSum=0.980;QD=13.13;ReadPosRankSum=-1.640;VQSLOD=1.8308;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:32:51.32:0,51,430	0/0:10,0:10:26.15:0,26,209	0/0:47,0:13:35.65:0,36,316	0/0:53,0:17:40.81:0,41,397	0/0:18,0:18:38.74:0,39,293	0/0:20,0:20:41.86:0,42,330	0/0:22,0:22:44.81:0,45,354	1/1:23,0:18:44.46:370,44,0	0/0:13,0:13:12.84:0,13,94	0/0:23,0:19:32.69:0,33,278	0/0:13,0:12:14.97:0,15,120	0/0:14,0:13:16.76:0,17,130	0/0:9,0:9:23.19:0,23,182	0/0:22,0:22:40.57:0,41,348	0/0:15,0:15:26.90:0,27,210	0/0:17,0:16:29.95:0,30,245	0/0:32,0:29:61.93:0,62,605	0/0:9,0:9:12.40:0,12,92	0/0:18,0:17:40.72:0,41,329	0/0:17,0:17:23.93:0,24,190	0/0:46,0:40:65.83:0,66,623	0/0:25,0:24:41.88:0,42,333	0/0:20,0:20:35.83:0,36,278	0/0:40,0:40:52.20:0,52,561	0/0:17,0:17:23.98:0,24,208	0/1:8,13:21:76.02:262,0,76	0/1:16,0:16:39.99:245,0,40	1/1:9,1:8:17.91:191,18,0
chr10	23039404	.	CCCTTCCTTCCTTCCTTCCTTCCTTCCTT	C	7918.08	PASS	AB=0.829;AC=37;AF=0.712;AN=52;BaseQRankSum=-2.555;DP=614;FS=7.888;HRun=0;HaplotypeScore=353.8936;InbreedingCoeff=0.4461;MQ=54.21;MQ0=15;MQRankSum=-4.402;QD=18.33;ReadPosRankSum=-0.499;VQSLOD=2.1524;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:38:24.06:0,24,486	0/1:7,0:10:17.19:29,0,17	./.	./.	1/1:11,22:32:21:391,21,0	1/1:20,0:17:12.04:388,12,0	1/1:21,0:20:12.01:200,12,0	1/1:18,0:17:15:181,15,0	1/1:19,0:17:15.05:190,15,0	1/1:17,14:30:37.79:1041,38,0	1/1:12,0:12:12.04:178,12,0	1/1:22,0:21:35.86:1074,36,0	1/1:24,0:23:34.74:861,35,0	1/1:22,0:22:21.07:369,21,0	0/0:17,0:24:18.05:0,18,1161	0/0:20,0:28:34.03:0,34,1955	0/0:20,0:20:11.47:0,11,356	0/1:16,0:16:33.91:34,0,267	0/1:13,0:18:11.69:12,0,249	0/1:12,0:26:17.45:17,0,413	0/1:22,0:18:23.16:23,0,467	1/1:16,0:16:24.05:357,24,0	0/0:6,15:21:0.94:0,1,1	1/1:27,0:25:12.04:258,12,0	1/1:14,0:14:24.06:350,24,0	1/1:10,16:26:33.11:1051,33,0	1/1:23,0:20:35.87:831,36,0	1/1:9,0:9:6.02:84,6,0
chr10	23039432	.	T	TC	6042.51	PASS	AB=0.751;AC=29;AF=0.518;AN=56;BaseQRankSum=2.830;DP=513;FS=3.665;HRun=2;HaplotypeScore=112.3336;InbreedingCoeff=0.6349;MQ=51.57;MQ0=15;MQRankSum=-6.243;QD=19.37;ReadPosRankSum=1.337;VQSLOD=4.8906;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:22:36.09:0,36,430	0/0:8,0:8:11.52:0,12,121	0/0:7,0:3:3.01:0,3,35	0/0:9,0:2:3:0,3,27	0/1:26,0:25:24.25:195,0,24	1/1:8,11:16:2.22:263,2,0	1/1:5,14:18:1.59:322,2,0	0/1:7,7:13:18.25:257,0,18	1/1:8,8:14:35.47:372,35,0	1/1:17,1:17:15.19:466,15,0	1/1:5,10:15:0.95:403,1,0	1/1:10,20:31:60.54:706,61,0	1/1:13,6:18:44.33:423,44,0	1/1:10,15:25:30.73:572,31,0	0/0:16,0:16:26.75:0,27,258	0/0:25,0:23:53.39:0,53,517	0/0:29,0:28:63.73:0,64,738	0/0:13,0:13:37.35:0,37,442	0/0:10,0:9:26.54:0,27,288	0/0:21,0:21:48.05:0,48,484	0/0:22,0:19:35.47:0,35,401	1/1:10,9:19:25.72:460,26,0	0/0:18,0:18:2.99:0,3,25	1/1:10,15:24:9.96:358,10,0	1/1:8,2:10:24.98:189,25,0	1/1:19,0:18:15.06:372,15,0	1/1:15,12:24:47.80:506,48,0	0/1:3,6:9:2.96:179,0,3
chr10	23039434	.	C	CT	5288.67	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=2.522;DP=507;FS=1.919;HRun=2;HaplotypeScore=114.7590;InbreedingCoeff=0.9135;MQ=50.46;MQ0=15;MQRankSum=-5.234;QD=17.17;ReadPosRankSum=0.386;VQSLOD=4.9138;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:33.08:0,33,394	0/0:7,0:7:14.50:0,14,131	0/0:3,0:2:6.01:0,6,65	0/0:9,0:1:3.01:0,3,37	1/1:25,0:24:20.95:203,21,0	1/1:15,2:15:23.62:193,24,0	1/1:18,1:18:32.57:242,33,0	1/1:14,1:13:29.25:285,29,0	1/1:12,5:15:14.81:296,15,0	1/1:17,0:16:38.57:332,39,0	1/1:11,4:15:38.45:319,38,0	1/1:26,5:31:39.93:486,40,0	1/1:13,6:18:28.01:459,28,0	1/1:18,6:24:53.47:474,53,0	0/0:14,0:14:29.75:0,30,284	0/0:26,0:24:53.38:0,53,506	0/0:29,0:28:65.62:0,66,740	0/0:15,0:15:17.75:0,18,391	0/0:12,0:11:23.56:0,24,269	0/0:21,0:21:39.05:0,39,410	0/0:22,0:19:38.31:0,38,424	1/1:13,6:19:27.26:457,27,0	0/0:17,0:17:2.81:0,3,25	1/1:20,4:24:16.62:287,17,0	1/1:6,6:12:7.34:294,7,0	1/1:18,0:17:32.80:295,33,0	1/1:19,7:23:50.71:494,51,0	1/1:8,2:10:17.94:174,18,0
chr10	23040102	.	T	TG	12561.11	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-15.963;DP=618;FS=4.277;HRun=6;HaplotypeScore=63.8523;InbreedingCoeff=0.9943;MQ=93.09;MQ0=0;MQRankSum=-2.848;QD=32.54;ReadPosRankSum=4.086;VQSLOD=5.2368;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:51.11:0,51,520	1/1:0,9:9:27.09:340,27,0	0/0:26,0:26:69.15:0,69,701	0/0:27,0:28:60.92:0,61,610	1/1:6,19:25:54.17:676,54,0	1/1:1,27:28:75.21:927,75,0	1/1:1,21:22:51.16:642,51,0	0/0:34,0:34:90.20:0,90,918	1/1:0,12:12:33.11:415,33,0	1/1:2,26:28:75.24:943,75,0	1/1:1,15:16:42.13:528,42,0	1/1:3,14:17:45.14:557,45,0	1/1:1,28:29:72.22:904,72,0	1/1:1,25:26:72.22:895,72,0	0/0:33,0:33:87.16:0,87,878	0/0:23,1:23:28.63:0,29,592	1/1:2,24:26:60.19:755,60,0	1/1:3,13:16:36.09:437,36,0	1/1:2,13:15:39.12:489,39,0	1/1:4,21:25:66.17:810,66,0	1/1:0,9:9:27.09:340,27,0	1/1:0,16:16:48.15:603,48,0	1/1:1,20:21:54.16:679,54,0	1/1:1,18:19:51.16:642,51,0	1/1:1,26:27:78.25:981,78,0	0/0:30,2:32:14.64:0,15,760	0/0:29,0:28:75.17:0,75,765	0/0:5,0:5:15.03:0,15,153
chr10	23040206	.	C	CA	4079.60	PASS	AB=0.967;AC=42;AF=0.750;AN=56;BaseQRankSum=2.752;DP=482;FS=11.222;HRun=7;HaplotypeScore=135.9203;InbreedingCoeff=0.3131;MQ=64.82;MQ0=6;MQRankSum=-4.576;QD=10.51;ReadPosRankSum=-3.332;VQSLOD=0.4150;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,9:14:13.62:282,14,0	1/1:4,0:4:5.95:44,6,0	0/0:26,0:16:14.60:0,15,168	0/0:28,0:13:14.86:0,15,144	1/1:25,4:29:24.58:237,25,0	0/1:14,0:14:12.12:12,0,38	0/1:10,0:10:4.16:85,0,4	1/1:18,9:27:36.04:615,36,0	1/1:7,0:7:3.27:19,3,0	1/1:23,0:23:7.99:74,8,0	0/1:19,1:20:16.85:58,0,17	1/1:10,1:11:1.80:40,2,0	1/1:13,0:13:7.67:42,8,0	1/1:11,1:12:4.16:55,4,0	0/0:22,0:22:66.09:0,66,631	0/0:17,0:17:40.92:0,41,403	1/1:14,1:15:13.59:120,14,0	0/1:11,1:12:23.39:35,0,23	1/1:9,0:8:9.77:63,10,0	1/1:26,4:29:39.22:308,39,0	1/1:5,0:5:2.50:16,3,0	0/1:14,0:14:21.09:33,0,21	1/1:11,3:14:12.47:67,12,0	1/1:13,0:13:14.33:101,14,0	0/1:24,2:25:21.64:104,0,22	1/1:12,16:28:64.65:700,65,0	1/1:19,12:31:69:758,69,0	1/1:5,2:7:20.94:211,21,0
chr10	23040213	.	AC	A	7214.40	PASS	AB=1.000;AC=47;AF=0.839;AN=56;BaseQRankSum=2.483;DP=490;FS=6.144;HRun=1;HaplotypeScore=133.8077;InbreedingCoeff=0.8123;MQ=56.03;MQ0=9;MQRankSum=-4.761;QD=18.36;ReadPosRankSum=-0.656;VQSLOD=4.6019;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:14,0:14:11.30:28,0,11	1/1:2,0:2:5.74:37,6,0	0/0:22,0:11:20.31:0,20,229	0/0:31,0:12:18.80:0,19,175	1/1:17,10:26:74.65:626,75,0	1/1:10,3:13:30.71:305,31,0	1/1:11,1:12:24.23:216,24,0	1/1:22,5:27:7.15:459,7,0	1/1:3,3:6:17.94:146,18,0	1/1:19,6:25:72.77:594,73,0	1/1:10,11:21:54.63:450,55,0	1/1:7,2:9:23.86:192,24,0	1/1:18,2:20:43.47:330,43,0	1/1:11,4:15:40.33:301,40,0	0/0:25,0:25:75.15:0,75,848	0/0:18,1:19:34.13:0,34,548	1/1:15,0:15:23.92:114,24,0	1/1:12,0:12:17.83:87,18,0	1/1:12,0:10:25.77:161,26,0	1/1:26,1:25:58.10:390,58,0	1/1:7,0:7:15.84:125,16,0	1/1:10,4:14:34.03:269,34,0	1/1:7,7:14:33.21:273,33,0	1/1:10,6:16:34.26:300,34,0	1/1:13,11:23:57:505,57,0	1/1:25,3:28:55.17:635,55,0	1/1:22,4:26:57.42:545,57,0	1/1:6,1:7:10.98:124,11,0
chr10	23040219	.	A	AAC	3164.97	PASS	AB=0.954;AC=12;AF=0.214;AN=56;BaseQRankSum=2.966;DP=527;FS=0.422;HRun=0;HaplotypeScore=171.1371;InbreedingCoeff=0.5916;MQ=49.68;MQ0=13;MQRankSum=-7.213;QD=21.83;ReadPosRankSum=1.765;VQSLOD=4.1863;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:12,0:14:0.09:0,0,88	0/1:2,0:2:8.68:9,0,10	0/0:21,0:7:10.28:0,10,127	0/0:39,0:13:21.21:0,21,211	0/0:27,0:27:67.03:0,67,403	0/0:12,0:12:32.54:0,33,285	0/0:15,0:15:38.35:0,38,244	1/1:23,11:34:32.99:968,33,0	0/0:5,0:5:14.75:0,15,97	0/0:26,0:26:45.33:0,45,391	0/0:23,0:23:53.98:0,54,395	0/0:12,0:12:31.39:0,31,202	0/0:23,0:23:49.28:0,49,317	0/0:15,0:15:42.57:0,43,294	0/0:26,0:26:78.22:0,78,1104	0/0:19,0:19:51.13:0,51,735	0/1:15,1:16:26.34:26,0,69	0/0:13,0:13:15.57:0,16,260	0/1:15,0:13:16.12:16,0,122	0/0:27,0:25:6.13:0,6,241	0/0:9,0:8:6.84:0,7,105	0/0:14,0:14:35.53:0,36,289	0/0:15,0:15:37.77:0,38,288	0/0:15,0:15:33.17:0,33,240	0/0:25,0:24:61.27:0,61,440	1/1:14,19:33:67.87:1217,68,0	1/1:11,14:24:62.78:891,63,0	1/1:3,3:6:14.97:206,15,0
chr10	23040221	.	AAC	A	5100.35	PASS	AB=1.000;AC=44;AF=0.786;AN=56;BaseQRankSum=2.828;DP=528;FS=5.659;HRun=0;HaplotypeScore=162.7778;InbreedingCoeff=0.5125;MQ=49.59;MQ0=13;MQRankSum=-3.429;QD=12.14;ReadPosRankSum=-1.412;VQSLOD=4.3193;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:14:16.26:67,16,0	1/1:2,0:2:5.09:19,5,0	0/0:21,0:7:8.67:0,9,98	0/0:40,1:14:3.62:0,4,78	1/1:26,2:27:73.40:665,73,0	1/1:12,0:12:13.72:181,14,0	1/1:14,1:15:20.88:229,21,0	0/1:33,0:33:10.89:11,0,111	1/1:5,0:5:14.94:135,15,0	1/1:24,1:25:64.26:483,64,0	1/1:22,1:23:55.83:502,56,0	1/1:12,0:12:23.82:218,24,0	1/1:22,1:23:50.21:372,50,0	1/1:13,2:15:36.65:272,37,0	0/0:27,0:27:39.47:0,39,227	0/0:19,0:19:22.99:0,23,149	1/1:16,0:16:8.78:46,9,0	0/1:13,0:13:20.17:20,0,30	0/1:16,0:14:6.97:70,0,7	1/1:28,0:26:21.66:168,22,0	1/1:9,0:8:12.35:47,12,0	1/1:13,1:14:10:191,10,0	1/1:14,1:15:27.59:300,28,0	1/1:15,0:15:28.81:318,29,0	1/1:26,0:25:58.32:560,58,0	1/1:33,0:33:33.41:163,33,0	0/1:23,0:22:1.97:44,0,2	1/1:5,0:5:6.57:18,7,0
chr10	23040222	.	AC	A	5960.57	PASS	AB=0.969;AC=50;AF=0.893;AN=56;BaseQRankSum=1.388;DP=530;FS=3.544;HRun=1;HaplotypeScore=152.5183;InbreedingCoeff=0.1563;MQ=49.53;MQ0=13;MQRankSum=0.091;QD=11.71;ReadPosRankSum=3.899;VQSLOD=3.7338;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:13:31.56:161,32,0	1/1:2,0:2:5.92:43,6,0	0/0:20,1:7:5.04:0,5,71	0/1:41,2:14:14.61:15,0,70	1/1:22,6:27:73.70:586,74,0	1/1:12,1:13:14:199,14,0	1/1:15,0:15:18.94:224,19,0	0/1:33,1:34:21.50:94,0,22	1/1:4,1:5:14.92:117,15,0	1/1:20,4:24:62.56:418,63,0	1/1:14,9:23:56.64:459,57,0	1/1:11,1:12:27.48:198,27,0	1/1:22,1:23:47.24:373,47,0	1/1:13,2:15:39.16:259,39,0	0/1:27,0:27:35.34:35,0,42	0/1:18,1:19:23.83:24,0,29	1/1:14,0:14:26.05:115,26,0	1/1:12,0:12:13.04:99,13,0	1/1:17,0:15:13.43:124,13,0	1/1:28,1:27:63.19:348,63,0	1/1:8,1:8:12.01:57,12,0	1/1:13,1:14:11.36:209,11,0	1/1:11,5:16:41.30:310,41,0	1/1:10,5:15:31.86:279,32,0	1/1:18,8:25:54.02:501,54,0	1/1:33,0:33:76.36:398,76,0	1/1:23,0:22:47.45:249,47,0	1/1:5,0:5:13.25:67,13,0
chr10	23040223	.	CA	C	3093.89	PASS	AB=0.863;AC=39;AF=0.696;AN=56;BaseQRankSum=-2.302;DP=533;FS=27.352;HRun=10;HaplotypeScore=162.9588;InbreedingCoeff=-0.0290;MQ=48.22;MQ0=13;MQRankSum=1.139;QD=6.20;ReadPosRankSum=2.612;VQSLOD=-0.1444;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:10.61:0,11,96	1/1:2,0:2:2.09:13,2,0	0/0:20,0:6:6.01:0,6,64	0/1:40,3:14:6.92:7,0,21	1/1:26,0:28:15.33:68,15,0	0/1:11,0:13:5.02:34,0,5	0/1:12,0:15:4.18:4,0,22	0/1:26,8:34:7.39:212,0,7	1/1:4,0:5:4.88:13,5,0	1/1:16,0:23:3.46:31,3,0	1/1:19,0:22:11.74:80,12,0	0/1:11,0:12:11.71:12,0,20	0/1:21,0:23:8.04:18,0,8	0/1:16,0:16:11.46:11,0,14	1/1:7,20:27:71.96:621,72,0	1/1:3,16:19:41.55:364,42,0	1/1:6,8:14:10.54:117,11,0	1/1:11,1:12:9.39:129,9,0	0/1:7,10:15:1.99:142,0,2	0/1:26,3:27:1.46:248,0,1	1/1:7,2:8:16.73:144,17,0	0/1:13,0:15:11.73:19,0,12	0/1:15,0:16:6.43:25,0,6	0/1:16,0:17:3.90:20,0,4	1/1:21,0:25:1.62:57,2,0	1/1:12,21:33:75.99:525,76,0	1/1:8,15:22:27.71:280,28,0	0/1:2,3:5:5.61:50,0,6
chr10	23040224	.	A	AC	1988.06	PASS	AB=0.900;AC=15;AF=0.268;AN=56;BaseQRankSum=4.009;DP=542;FS=3.654;HRun=1;HaplotypeScore=169.0874;InbreedingCoeff=0.4856;MQ=47.57;MQ0=13;MQRankSum=-6.987;QD=10.86;ReadPosRankSum=1.498;VQSLOD=2.0734;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:4.34:0,4,44	1/1:1,1:2:2.52:39,3,0	0/0:23,0:7:13.73:0,14,124	0/0:44,0:13:11.19:0,11,114	0/0:29,0:28:45.54:0,46,282	0/0:13,0:13:36.20:0,36,204	0/0:15,0:15:39.02:0,39,212	0/1:33,0:35:26.96:274,0,27	0/0:5,0:5:13.87:0,14,66	0/0:23,0:23:44.20:0,44,291	0/0:22,0:22:49.34:0,49,265	0/0:12,0:12:31.25:0,31,181	0/0:23,0:23:54.05:0,54,314	0/0:16,0:16:37.33:0,37,246	0/0:27,0:27:66.31:0,66,390	0/0:19,0:19:49.18:0,49,286	1/1:13,1:14:9.48:126,9,0	0/1:9,1:12:43.01:43,0,60	0/1:18,1:17:33.82:98,0,34	0/1:26,3:27:58.81:219,0,59	0/1:8,1:8:4.56:58,0,5	0/0:15,0:15:37.24:0,37,232	0/0:16,0:16:35.61:0,36,189	0/0:17,0:17:31.24:0,31,166	0/0:26,0:25:60.08:0,60,305	1/1:31,2:34:44.79:739,45,0	1/1:23,0:23:32.62:454,33,0	1/1:5,0:5:11.54:115,12,0
chr10	23040226	.	A	AC	1933.50	PASS	AB=0.996;AC=23;AF=0.411;AN=56;BaseQRankSum=3.797;DP=549;FS=10.765;HRun=0;HaplotypeScore=169.8134;InbreedingCoeff=-0.1369;MQ=47.34;MQ0=13;MQRankSum=-1.110;QD=5.31;ReadPosRankSum=2.689;VQSLOD=2.9877;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,5:14:31.76:291,32,0	0/0:2,0:2:1.14:0,1,5	0/0:24,0:7:20.32:0,20,151	0/0:44,0:12:19.86:0,20,145	0/1:30,0:29:8.61:231,0,9	0/1:14,0:14:42.26:110,0,42	0/1:16,0:16:58.86:108,0,59	0/1:33,0:33:11.93:12,0,177	0/1:6,0:6:5.17:50,0,5	0/1:24,0:24:19.19:173,0,19	0/1:23,0:23:22.99:162,0,23	0/1:12,0:12:39.13:48,0,39	0/1:24,0:24:86.94:147,0,87	0/1:16,0:16:61.63:80,0,62	0/0:28,0:28:80.22:0,80,556	0/0:18,0:18:29.58:0,30,288	0/1:13,1:14:22.93:23,0,93	0/0:12,0:12:16.60:0,17,216	0/0:19,0:17:33.87:0,34,271	0/0:29,0:27:34.37:0,34,393	0/0:9,0:8:20.34:0,20,125	1/1:15,0:15:1.55:130,2,0	1/1:17,0:17:0.24:114,0,0	1/1:17,0:17:13.12:122,13,0	0/1:27,0:26:17.29:183,0,17	0/1:33,0:33:33.44:77,0,33	0/1:23,0:22:35.38:35,0,65	0/1:6,0:6:0.78:1,0,5
chr10	23040231	.	AAAC	A	1872.33	PASS	AB=0.978;AC=23;AF=0.411;AN=56;BaseQRankSum=3.359;DP=544;FS=2.174;HRun=0;HaplotypeScore=183.9354;InbreedingCoeff=-0.0670;MQ=45.11;MQ0=14;MQRankSum=-0.951;QD=5.46;ReadPosRankSum=2.306;VQSLOD=3.0293;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:15,0:15:33.76:52,0,34	1/1:2,0:2:4.72:16,5,0	0/0:25,0:7:14.50:0,14,204	0/0:42,0:9:11.77:0,12,131	0/1:25,2:26:3.54:206,0,4	0/1:14,0:14:8.36:133,0,8	0/1:14,0:14:22.23:87,0,22	0/1:32,0:32:20.23:20,0,212	0/1:7,0:7:31.51:55,0,32	0/1:21,1:22:8.10:222,0,8	0/1:25,1:26:36.61:208,0,37	0/1:11,1:12:15.12:121,0,15	1/1:20,0:20:17.85:154,18,0	1/1:13,1:14:27.56:208,28,0	0/0:28,0:28:83.71:0,84,645	0/0:18,0:18:39.01:0,39,314	0/0:16,0:16:17.28:0,17,220	0/0:12,0:12:29.98:0,30,316	0/0:21,0:19:38.12:0,38,389	0/0:29,0:27:17.99:0,18,491	0/0:10,0:9:19.66:0,20,164	0/1:14,0:14:39.29:81,0,39	0/1:16,2:18:65.56:127,0,66	0/1:18,0:18:20.77:63,0,21	1/1:25,1:25:20.65:220,21,0	0/1:31,0:31:59.25:59,0,61	0/1:25,0:24:10.71:11,0,97	0/1:6,0:6:7.10:7,0,12
chr10	23040265	.	AAAC	A	2386	PASS	AB=0.995;AC=20;AF=0.357;AN=56;BaseQRankSum=-2.040;DP=513;FS=5.959;HRun=0;HaplotypeScore=151.7804;InbreedingCoeff=-0.0335;MQ=57.82;MQ0=10;MQRankSum=-1.940;QD=7.14;ReadPosRankSum=-5.939;VQSLOD=0.5014;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:43.46:0,43,331	0/0:2,0:2:6.02:0,6,126	0/0:19,0:8:2.99:0,3,155	0/1:33,0:14:36.53:37,0,242	0/1:25,0:24:9.82:10,0,632	0/1:19,0:19:0.03:0,0,413	0/1:16,0:16:31.98:32,0,300	0/1:25,2:27:14.19:341,0,14	0/1:12,0:12:6.89:7,0,299	0/1:21,0:21:3.16:3,0,587	0/1:23,0:23:12.24:12,0,499	0/1:9,0:9:72.18:72,0,176	0/1:19,0:20:50.61:51,0,385	0/0:15,0:15:29.46:0,29,316	0/0:28,0:28:80.81:0,81,1404	0/0:17,0:17:45.14:0,45,853	0/0:12,0:11:27.07:0,27,467	0/0:13,0:13:14.05:0,14,455	0/0:17,0:16:42.08:0,42,676	0/0:22,0:21:51.01:0,51,978	0/0:15,0:15:12.05:0,12,762	0/1:18,0:18:0.85:1,0,382	0/1:20,0:19:20.33:20,0,353	0/1:15,0:15:16.78:17,0,300	0/1:15,0:15:6.70:7,0,316	1/1:12,16:28:46.32:1074,46,0	1/1:4,24:27:47.78:714,48,0	1/1:2,3:5:9.50:153,10,0
chr10	23040268	.	C	CA	7123.08	PASS	AB=0.825;AC=34;AF=0.607;AN=56;BaseQRankSum=-1.098;DP=531;FS=0.000;HRun=9;HaplotypeScore=126.4099;InbreedingCoeff=0.7959;MQ=64.26;MQ0=9;MQRankSum=0.637;QD=20.01;ReadPosRankSum=1.003;VQSLOD=3.6384;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:18:18:0,18,60	0/0:3,0:3:5.99:0,6,52	0/0:22,0:13:7.70:0,8,111	0/1:30,0:13:39.14:39,0,105	1/1:11,14:24:25.11:490,25,0	1/1:2,18:20:57.15:628,57,0	1/1:4,13:17:35.12:371,35,0	0/1:12,14:26:49.56:367,0,50	1/1:3,9:12:33.04:351,33,0	1/1:9,16:25:57.13:612,57,0	1/1:7,16:23:48.13:528,48,0	1/1:6,5:11:27.06:289,27,0	1/1:9,13:22:54.14:590,54,0	1/1:9,7:16:31.89:329,32,0	0/0:27,0:27:74.91:0,75,640	0/0:17,0:17:47.98:0,48,413	0/0:12,0:11:23.99:0,24,207	0/0:15,0:15:26.92:0,27,227	0/0:22,0:21:47.95:0,48,411	0/0:24,0:23:52.19:0,52,445	0/0:14,1:15:8.80:0,9,305	1/1:3,16:20:47.75:477,48,0	1/1:10,10:20:9.22:398,9,0	1/1:1,13:14:40.66:434,41,0	1/1:3,10:13:35.82:367,36,0	1/1:21,7:28:72.94:565,73,0	1/1:26,1:27:37.73:231,38,0	1/1:5,0:5:8.80:54,9,0
chr10	23040354	.	G	GA	9587.88	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=-13.557;DP=489;FS=1.363;HRun=9;HaplotypeScore=60.0709;InbreedingCoeff=0.9577;MQ=79.68;MQ0=0;MQRankSum=-0.742;QD=26.78;ReadPosRankSum=3.850;VQSLOD=5.1533;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:41.99:0,42,365	1/1:0,8:8:21.06:232,21,0	0/0:14,0:15:17.80:0,18,195	0/0:13,0:12:9.49:0,9,160	1/1:4,27:31:26.11:744,26,0	1/1:0,20:22:63:678,63,0	1/1:1,14:15:39.11:431,39,0	0/0:3,0:27:44.81:0,45,131	1/1:1,8:9:24.06:265,24,0	1/1:8,27:35:81.20:885,81,0	1/1:1,12:13:36.09:391,36,0	1/1:6,8:14:33.04:344,33,0	1/1:6,13:19:45.10:483,45,0	1/1:3,13:17:16.05:391,16,0	1/1:3,15:18:19.15:439,19,0	1/1:1,18:19:54.15:597,54,0	1/1:2,8:9:21.06:232,21,0	1/1:1,8:9:21.06:232,21,0	1/1:6,16:22:45.11:488,45,0	1/1:3,27:30:78.21:863,78,0	1/1:3,11:14:33.09:365,33,0	1/1:1,10:11:30.08:332,30,0	1/1:2,16:18:45.12:497,45,0	1/1:1,4:5:12.03:133,12,0	1/1:1,18:19:51.14:564,51,0	0/0:5,0:34:53.42:0,53,157	0/0:4,0:21:34.63:0,35,102	0/0:0,0:6:6.11:0,6,18
chr10	23041262	.	CT	C	3419.32	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=11.575;DP=743;FS=2.965;HRun=3;HaplotypeScore=69.0799;InbreedingCoeff=0.9999;MQ=84.48;MQ0=0;MQRankSum=-1.145;QD=34.54;ReadPosRankSum=-0.625;VQSLOD=3.9839;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:78.26:0,78,1122	0/0:16,0:16:45.15:0,45,647	0/0:24,0:24:69.20:0,69,964	0/0:20,0:20:56.75:0,57,711	0/0:27,0:27:81.26:0,81,1147	0/0:23,0:23:69.23:0,69,993	0/0:18,0:18:54.18:0,54,778	1/1:1,33:34:93.25:1114,93,0	0/0:37,0:37:99:0,111,1579	0/0:33,0:33:96.32:0,96,1362	0/0:33,0:33:93.30:0,93,1322	0/0:24,0:24:72.24:0,72,1037	0/0:32,0:32:96.32:0,96,1382	0/0:26,0:26:78.26:0,78,1123	0/0:30,0:30:84.27:0,84,1190	0/0:38,0:38:99:0,114,1626	0/0:38,0:38:99:0,108,1537	0/0:21,0:21:63.21:0,63,907	0/0:30,0:30:81.25:0,81,1129	0/0:22,0:22:66.21:0,66,933	0/0:20,0:20:60.20:0,60,864	0/0:30,0:30:90.30:0,90,1296	0/0:22,0:22:66.22:0,66,950	0/0:27,0:27:78.26:0,78,1123	0/0:26,0:26:78.26:0,78,1123	1/1:0,34:34:99:1264,102,0	1/1:0,20:20:50.79:632,51,0	1/1:0,11:11:33.10:409,33,0
chr10	23042758	.	GTCTA	G	1869.54	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.100;DP=699;FS=0.636;HRun=0;HaplotypeScore=127.2237;InbreedingCoeff=0.9994;MQ=90.75;MQ0=0;MQRankSum=-2.809;QD=43.48;ReadPosRankSum=1.558;VQSLOD=3.9064;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:72.23:0,72,1876	0/0:11,0:11:30.10:0,30,804	0/0:30,0:30:71.51:0,72,2160	0/0:27,0:27:70.73:0,71,1592	0/0:36,0:36:99:0,105,2770	0/0:26,0:26:66.23:0,66,1778	0/0:26,0:26:72.23:0,72,1875	0/0:38,0:38:99:0,102,2457	0/0:15,0:15:39.12:0,39,978	0/0:30,0:30:87.29:0,87,2261	0/0:25,0:25:72.25:0,72,1928	0/0:20,0:20:60.21:0,60,1582	0/0:38,0:38:99:0,114,3033	0/0:20,0:20:54.19:0,54,1456	1/1:1,21:22:51.17:967,51,0	1/1:0,21:21:54.19:1024,54,0	0/0:27,0:27:81.28:0,81,2160	0/0:22,0:22:60.21:0,60,1594	0/0:20,0:20:57.18:0,57,1448	0/0:26,0:26:75.26:0,75,1992	0/0:28,0:28:78.27:0,78,2056	0/0:20,0:20:57.20:0,57,1530	0/0:18,0:18:54.19:0,54,1452	0/0:26,0:26:78.27:0,78,2102	0/0:27,0:27:75.26:0,75,1996	0/0:36,0:36:99:0,105,2615	0/0:27,0:27:78.27:0,78,2102	0/0:11,0:11:30.10:0,30,768
chr10	23043352	.	CAGAG	C	589.30	PASS	AB=0.914;AC=24;AF=0.632;AN=38;BaseQRankSum=2.901;DP=415;FS=5.752;HRun=0;HaplotypeScore=72.1122;InbreedingCoeff=0.0986;MQ=59.89;MQ0=7;MQRankSum=-0.739;QD=2.72;ReadPosRankSum=-0.559;VQSLOD=0.9671;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:18:5.99:0,6,49	1/1:6,0:7:3:28,3,0	./.	./.	./.	1/1:16,0:18:2.87:15,3,0	1/1:15,0:14:3:28,3,0	./.	1/1:8,0:9:3:28,3,0	0/0:15,0:14:2.29:0,2,6	1/1:12,1:13:3.01:46,3,0	./.	1/1:19,0:20:9.02:112,9,0	1/1:11,1:12:3:46,3,0	0/1:17,2:21:40.05:105,0,40	0/1:17,0:18:47.35:63,0,47	0/0:15,0:15:0:0,0,0	0/1:9,0:10:0.89:1,0,110	./.	1/1:19,0:19:3:28,3,0	./.	./.	1/1:13,0:12:3:45,3,0	1/1:16,2:18:6.02:92,6,0	./.	0/0:12,0:13:2.74:0,3,12	0/1:22,0:23:14.94:64,0,15	0/0:1,0:1:0:0,0,0
chr10	23043555	.	T	TA	1322.96	PASS	AB=0.917;AC=9;AF=0.161;AN=56;BaseQRankSum=-6.110;DP=542;FS=4.100;HRun=10;HaplotypeScore=71.6141;InbreedingCoeff=0.8475;MQ=75.15;MQ0=1;MQRankSum=1.034;QD=13.36;ReadPosRankSum=-0.897;VQSLOD=3.5788;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:53.81:0,54,435	0/1:10,1:11:2.02:2,0,192	0/0:25,0:21:6.08:0,6,190	0/0:22,0:17:4.56:0,5,115	0/0:25,0:29:62.99:0,63,482	0/0:21,0:21:47.93:0,48,394	0/0:20,0:20:50.89:0,51,413	1/1:11,17:28:20.44:408,20,0	0/0:18,0:18:53.71:0,54,424	0/0:25,0:25:56.91:0,57,466	0/0:23,0:23:59.92:0,60,492	0/0:18,0:18:23.78:0,24,345	0/0:15,0:15:32.94:0,33,271	0/0:20,0:21:43.98:0,44,351	0/0:2,0:17:30.55:0,31,88	0/0:1,0:19:34.63:0,35,100	0/0:18,0:18:40.96:0,41,326	0/0:7,0:9:23.01:0,23,178	0/0:18,0:17:44.94:0,45,369	0/0:23,0:23:56.90:0,57,465	0/0:9,0:11:13.04:0,13,84	0/0:14,0:14:35.96:0,36,295	0/0:11,0:11:20.95:0,21,172	0/0:16,0:16:38.91:0,39,317	0/0:28,0:29:64.86:0,65,515	1/1:9,16:26:53.97:556,54,0	1/1:7,18:25:31.32:323,31,0	1/1:0,9:9:18.05:192,18,0
chr10	23044910	.	AATATATATT	A	1746.34	PASS	AC=12;AF=0.231;AN=52;BaseQRankSum=5.874;DP=233;FS=9.410;HRun=0;HaplotypeScore=70.8268;InbreedingCoeff=0.7001;MQ=86.57;MQ0=0;MQRankSum=-5.617;QD=44.78;ReadPosRankSum=1.412;VQSLOD=2.0297;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:21.04:0,21,861	1/1:3,0:3:3.01:48,3,0	0/0:15,0:10:11.18:0,11,79	0/0:8,0:8:14.19:0,14,209	0/0:8,0:8:15.04:0,15,427	0/0:11,0:11:27.08:0,27,1144	0/0:2,0:2:3.01:0,3,140	0/0:35,0:35:87.30:0,87,3768	0/0:4,0:4:9.03:0,9,420	0/0:5,0:5:6.02:0,6,191	0/0:11,0:11:13.29:0,13,433	0/0:7,0:7:9.02:0,9,305	0/0:3,0:3:9.03:0,9,420	0/0:4,0:4:6.02:0,6,280	0/0:2,0:2:3.01:0,3,140	0/0:7,0:7:18.06:0,18,823	1/1:4,6:10:15.05:413,15,0	1/1:3,4:7:12.04:334,12,0	1/1:0,12:12:33.11:928,33,0	1/1:5,0:5:3:25,3,0	1/1:0,2:2:6.02:155,6,0	./.	0/0:3,0:3:3.01:0,3,140	./.	0/0:8,0:8:18.06:0,18,720	0/0:10,0:10:24.08:0,24,1033	0/0:10,0:10:21.07:0,21,922	0/0:25,0:25:72.20:0,72,3107
chr10	23045185	.	TTCCTC	T	827.82	PASS	AC=4;AF=0.077;AN=52;BaseQRankSum=-0.342;DP=458;FS=7.103;HRun=0;HaplotypeScore=90.4857;InbreedingCoeff=0.9449;MQ=49.38;MQ0=6;MQRankSum=-0.448;QD=23.00;ReadPosRankSum=2.487;VQSLOD=2.3372;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:36.08:0,36,1004	0/0:6,0:6:12.04:0,12,321	./.	./.	0/0:10,0:10:15.05:0,15,413	0/0:16,0:16:27.09:0,27,802	0/0:24,0:23:60.14:0,60,1652	0/0:26,0:26:66.05:0,66,1471	0/0:18,0:17:39.12:0,39,1038	0/0:17,0:16:42.14:0,42,1175	0/0:9,0:9:21.07:0,21,576	0/0:15,0:15:36.11:0,36,1003	0/0:12,0:12:11.91:0,12,280	0/0:12,0:11:24.08:0,24,712	1/1:3,15:18:30.10:591,30,0	1/1:7,11:18:18.06:355,18,0	0/0:31,0:31:39.13:0,39,1094	0/0:20,0:18:32.99:0,33,827	0/0:13,0:11:27.09:0,27,771	0/0:13,0:13:30.05:0,30,819	0/0:26,0:22:29.91:0,30,790	0/0:15,0:14:21.07:0,21,524	0/0:12,0:11:27.05:0,27,663	0/0:23,0:23:33.11:0,33,961	0/0:11,0:11:21.07:0,21,591	0/0:20,0:20:36.10:0,36,985	0/0:13,0:12:21:0,21,507	0/0:22,0:18:30.05:0,30,783
chr10	23045233	.	CA	C	8027.49	PASS	AB=0.556;AC=46;AF=0.821;AN=56;BaseQRankSum=-1.571;DP=478;FS=13.635;HRun=10;HaplotypeScore=54.2443;InbreedingCoeff=0.7959;MQ=65.63;MQ0=7;MQRankSum=-0.320;QD=18.80;ReadPosRankSum=4.086;VQSLOD=4.5483;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,31:34:68.98:599,69,0	1/1:1,7:8:11.99:104,12,0	0/0:11,0:7:15:0,15,148	0/0:7,0:4:9:0,9,84	1/1:1,17:18:38.85:322,39,0	1/1:0,13:14:38.03:319,38,0	1/1:6,23:29:59.98:521,60,0	1/1:5,22:27:62.94:538,63,0	1/1:2,11:13:23.99:208,24,0	1/1:4,13:16:38.99:338,39,0	1/1:1,14:15:41.99:365,42,0	1/1:1,14:15:38.99:339,39,0	1/1:1,10:11:26.99:234,27,0	0/1:4,16:20:2.16:363,0,2	0/0:16,0:17:38.85:0,39,389	0/0:15,1:16:6.96:0,7,283	1/1:4,21:25:44.98:391,45,0	1/1:4,12:15:32.98:286,33,0	1/1:4,10:12:29.97:257,30,0	1/1:0,10:10:29.99:260,30,0	1/1:4,16:20:38.99:339,39,0	0/1:3,12:15:0.25:227,0,0	1/1:1,11:12:23.99:208,24,0	1/1:3,18:23:46.06:377,46,0	1/1:1,10:11:26.99:234,27,0	1/1:4,21:25:59.96:521,60,0	1/1:4,19:23:56.88:495,57,0	1/1:1,11:11:21:182,21,0
chr10	23045615	.	C	CA	5988.63	PASS	AB=0.536;AC=11;AF=0.196;AN=56;BaseQRankSum=-15.440;DP=709;FS=0.000;HRun=2;HaplotypeScore=68.5785;InbreedingCoeff=0.8827;MQ=85.29;MQ0=0;MQRankSum=-5.158;QD=40.74;ReadPosRankSum=0.503;VQSLOD=4.8604;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,153,1971	0/0:5,0:5:15.05:0,15,194	0/0:23,0:23:68.79:0,69,848	0/0:31,0:31:83.26:0,83,1007	0/0:36,0:36:99:0,102,1309	0/0:27,0:27:78.25:0,78,1012	0/0:19,0:19:57.19:0,57,739	1/1:2,33:35:99:1444,99,0	0/0:29,0:29:84.27:0,84,1091	0/0:20,0:20:60.19:0,60,768	0/0:26,0:26:78.25:0,78,1011	0/0:31,0:31:90.29:0,90,1168	0/0:33,0:33:96.27:0,96,1213	0/0:19,0:19:54.15:0,54,672	1/1:0,29:29:84.28:1259,84,0	1/1:1,20:21:54.18:810,54,0	0/0:26,0:26:69.22:0,69,896	0/0:11,0:11:29.46:0,29,358	0/0:29,0:29:72.21:0,72,916	0/0:29,0:29:87.28:0,87,1129	0/0:21,0:21:57.18:0,57,740	0/0:29,0:29:87.28:0,87,1130	0/0:24,0:24:69.22:0,69,895	0/0:22,0:22:66.21:0,66,857	0/0:21,0:21:60.18:0,60,766	0/1:2,13:15:35.80:497,0,36	1/1:2,38:40:99:1664,111,0	1/1:0,7:7:21.07:315,21,0
chr10	23045953	.	C	CA	10302.61	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-15.081;DP=563;FS=0.323;HRun=4;HaplotypeScore=49.7636;InbreedingCoeff=0.9987;MQ=82.06;MQ0=0;MQRankSum=-0.531;QD=36.53;ReadPosRankSum=1.916;VQSLOD=4.9309;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:75.15:0,75,824	0/0:8,0:8:24.07:0,24,272	0/0:19,0:19:48.12:0,48,534	0/0:12,0:12:30.08:0,30,337	1/1:1,35:36:99:1415,105,0	1/1:2,30:32:87.29:1190,87,0	1/1:1,15:16:39.13:534,39,0	0/0:33,0:33:93.25:0,93,1040	1/1:0,10:10:21.07:287,21,0	1/1:1,18:19:54.16:720,54,0	1/1:2,29:31:87.29:1190,87,0	1/1:1,16:17:45.15:616,45,0	1/1:1,15:16:45.15:616,45,0	1/1:1,20:21:57.19:780,57,0	0/0:17,0:17:45.10:0,45,498	0/0:13,0:13:33.06:0,33,354	0/0:22,0:22:48.13:0,48,544	0/0:13,0:13:33.09:0,33,374	0/0:14,0:14:36.10:0,36,408	0/0:26,0:26:72.20:0,72,817	0/0:9,0:9:24.07:0,24,272	1/1:1,25:26:72.24:984,72,0	1/1:0,19:19:51.17:698,51,0	1/1:0,16:16:39.13:534,39,0	1/1:3,20:23:54.18:739,54,0	0/0:28,0:28:69.19:0,69,783	0/0:29,0:29:81.23:0,81,919	0/0:13,0:13:33.09:0,33,374
chr10	23049294	.	A	AT	2128.65	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-10.869;DP=688;FS=1.747;HRun=5;HaplotypeScore=66.8731;InbreedingCoeff=0.9917;MQ=88.48;MQ0=0;MQRankSum=-0.785;QD=34.90;ReadPosRankSum=0.824;VQSLOD=3.7593;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:93.20:0,93,989	0/0:17,0:17:51.13:0,51,548	0/0:27,0:27:66.09:0,66,663	0/0:23,0:23:66.01:0,66,667	0/0:29,0:29:87.22:0,87,935	0/0:28,0:28:84.21:0,84,903	0/0:24,0:24:69.17:0,69,742	0/0:42,0:42:99:0,111,1179	0/0:26,0:26:72.18:0,72,773	0/0:20,0:20:60.15:0,60,645	0/0:20,0:20:57.12:0,57,597	0/0:16,0:16:48.12:0,48,515	0/0:25,0:25:69.17:0,69,737	0/0:27,0:27:78.18:0,78,830	1/1:0,33:33:99:1303,99,0	1/1:3,25:28:72.23:947,72,0	0/0:30,0:30:81.20:0,81,871	0/0:7,0:7:18.02:0,18,193	0/0:18,0:18:48.10:0,48,503	0/0:30,0:30:84.19:0,84,894	0/0:25,0:25:75.14:0,75,782	0/0:21,0:21:60.15:0,60,645	0/0:27,0:27:75.19:0,75,806	0/0:23,0:23:63.16:0,63,677	0/0:22,0:22:63.16:0,63,677	0/0:28,0:28:75.17:0,75,793	0/0:28,0:27:66.15:0,66,701	0/0:6,0:6:18.05:0,18,193
chr10	23049899	.	TA	T	5115.93	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=17.909;DP=593;FS=0.000;HRun=6;HaplotypeScore=101.7106;InbreedingCoeff=0.9743;MQ=73.45;MQ0=0;MQRankSum=-2.716;QD=25.97;ReadPosRankSum=3.797;VQSLOD=4.5783;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,30:33:72.18:773,72,0	1/1:1,18:19:51.13:548,51,0	0/0:13,0:13:21.06:0,21,249	0/0:8,0:8:5.99:0,6,59	0/0:32,0:32:90.29:0,90,1182	0/0:26,0:26:78.24:0,78,1012	0/0:21,0:21:60.17:0,60,762	0/0:43,0:43:99:0,105,1342	0/0:16,0:16:45.15:0,45,592	0/0:37,0:37:99:0,99,1291	0/0:25,0:25:75.24:0,75,974	0/0:17,0:17:48.14:0,48,617	0/0:15,0:15:42.13:0,42,539	0/0:14,0:14:33.09:0,33,417	1/1:1,19:20:51.04:548,51,0	1/1:8,15:23:11.65:476,12,0	1/1:2,18:20:51.13:548,51,0	1/1:0,10:10:27.07:289,27,0	1/1:2,24:26:72.18:774,72,0	1/1:5,31:36:87.21:935,87,0	1/1:2,8:10:21.05:226,21,0	0/0:13,0:13:36.12:0,36,474	0/0:27,0:27:78.24:0,78,1012	0/0:10,0:10:27.09:0,27,355	0/0:31,0:31:90.29:0,90,1172	0/0:14,0:14:39.10:0,39,485	0/0:29,0:28:81.25:0,81,1050	0/0:5,0:5:15.05:0,15,197
chr10	23050010	.	C	CT	4049.53	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=10.846;DP=685;FS=0.000;HRun=0;HaplotypeScore=83.1058;InbreedingCoeff=0.9950;MQ=84.21;MQ0=0;MQRankSum=-1.979;QD=36.16;ReadPosRankSum=0.600;VQSLOD=3.3454;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:60.20:0,60,839	0/0:19,0:19:57.19:0,57,797	0/0:28,0:28:81.19:0,81,1043	0/0:19,0:19:47.95:0,48,600	0/0:29,0:29:87.28:0,87,1197	0/0:32,0:32:96.32:0,96,1331	0/0:18,0:18:54.16:0,54,721	1/1:2,34:36:99:1318,101,0	0/0:25,0:25:75.23:0,75,1017	0/0:27,0:27:78.26:0,78,1091	0/0:23,0:23:69.23:0,69,962	0/0:28,0:28:84.28:0,84,1174	0/0:21,0:21:63.21:0,63,879	0/0:29,0:29:87.28:0,87,1200	0/0:33,0:33:99:0,99,1384	0/0:29,0:29:84.28:0,84,1175	0/0:22,0:22:63.21:0,63,881	0/0:9,0:9:24.08:0,24,332	0/0:22,0:22:63.20:0,63,865	0/0:31,0:31:93.31:0,93,1289	0/0:24,0:24:69.23:0,69,965	0/0:18,0:18:51.17:0,51,712	0/0:30,0:30:87.29:0,87,1216	0/0:17,0:17:51.16:0,51,696	0/0:19,0:19:57.18:0,57,780	1/1:1,24:25:72.13:945,72,0	1/1:3,42:45:99:1591,122,0	1/1:0,5:5:15.05:195,15,0
chr10	23050787	.	A	AAT	4460	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-2.910;DP=558;FS=0.369;HRun=0;HaplotypeScore=76.1895;InbreedingCoeff=0.9953;MQ=75.34;MQ0=1;MQRankSum=-1.824;QD=28.59;ReadPosRankSum=0.528;VQSLOD=5.6310;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:21:48.90:261,49,0	1/1:0,7:7:21.07:367,21,0	0/0:17,0:17:38.12:0,38,410	0/0:14,0:14:34.35:0,34,344	0/0:26,0:26:69.20:0,69,918	0/0:28,0:28:75.24:0,75,1031	0/0:12,0:12:33.09:0,33,429	0/0:26,0:26:68.96:0,69,595	0/0:22,0:22:66.17:0,66,845	0/0:25,0:25:75.22:0,75,979	0/0:23,0:23:63.16:0,63,803	0/0:17,0:17:45.13:0,45,599	0/0:34,0:34:99:0,99,1345	0/0:24,0:24:69.21:0,69,934	1/1:19,0:19:43.13:231,43,0	1/1:24,0:24:60.38:324,60,0	1/1:3,17:19:42.14:733,42,0	1/1:2,6:9:15.05:261,15,0	1/1:3,20:24:63.11:895,63,0	1/1:2,18:21:57.06:916,57,0	1/1:1,10:11:27.09:471,27,0	0/0:13,0:13:39.12:0,39,530	0/0:23,0:23:63.17:0,63,829	0/0:17,0:17:48.12:0,48,607	0/0:18,0:18:54.17:0,54,726	0/0:27,0:27:80.92:0,81,687	0/0:30,0:30:68.93:0,69,582	0/0:6,0:6:17.98:0,18,152
chr10	23050790	.	AT	A	1784.09	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=1.684;DP=558;FS=2.844;HRun=9;HaplotypeScore=74.8271;InbreedingCoeff=0.9929;MQ=76.56;MQ0=1;MQRankSum=0.101;QD=19.82;ReadPosRankSum=-0.952;VQSLOD=3.9118;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:42.79:0,43,162	0/0:7,0:7:20.32:0,20,112	0/0:17,0:18:34.78:0,35,345	0/0:14,0:14:25.89:0,26,253	0/0:23,0:23:63.18:0,63,719	0/0:27,0:27:78.22:0,78,892	0/0:12,0:12:30.08:0,30,337	1/1:7,19:26:57.02:521,57,0	0/0:22,0:22:57.16:0,57,648	0/0:26,0:26:69.20:0,69,795	0/0:23,0:23:54.16:0,54,622	0/0:17,0:17:48.13:0,48,545	0/0:34,0:34:96.27:0,96,1093	0/0:25,0:25:75.19:0,75,844	0/0:19,0:19:38.95:0,39,149	0/0:25,0:25:51.46:0,51,194	0/0:18,0:17:40.71:0,41,229	0/0:9,0:9:17.52:0,18,115	0/0:21,0:21:49.44:0,49,322	0/0:21,0:21:48.75:0,49,272	0/0:12,0:11:26.12:0,26,144	0/0:13,0:13:39.10:0,39,441	0/0:24,0:24:63.17:0,63,718	0/0:18,0:18:42.12:0,42,482	0/0:18,0:18:51.14:0,51,580	1/1:4,24:28:72.01:654,72,0	1/1:3,27:30:66.02:604,66,0	1/1:0,6:6:18.01:165,18,0
chr10	23050791	.	T	TA	3466.02	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=-0.179;DP=555;FS=0.000;HRun=1;HaplotypeScore=69.0991;InbreedingCoeff=0.8972;MQ=76.38;MQ0=1;MQRankSum=-2.448;QD=23.11;ReadPosRankSum=2.026;VQSLOD=3.6450;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,21:22:49.36:698,49,0	1/1:7,0:7:20.59:124,21,0	0/0:17,0:17:34.73:0,35,454	0/0:14,0:14:27.59:0,28,325	0/0:23,0:23:69.20:0,69,915	0/0:27,0:27:81.25:0,81,1084	0/0:12,0:12:36.09:0,36,452	0/0:25,0:24:42.69:0,43,373	0/0:22,0:22:66.18:0,66,857	0/0:27,0:27:78.24:0,78,1026	0/0:22,0:22:66.19:0,66,850	0/0:16,0:16:48.15:0,48,646	0/0:34,0:34:99:0,102,1359	0/0:27,0:27:75.23:0,75,999	1/1:0,18:18:45.15:643,45,0	1/1:0,25:25:63.21:901,63,0	1/1:18,0:17:20.47:210,20,0	0/1:8,0:8:16.32:71,0,16	1/1:21,0:21:6.24:319,6,0	1/1:20,0:20:55.52:342,56,0	1/1:11,0:10:26.46:159,26,0	0/0:13,0:13:39.12:0,39,529	0/0:23,0:23:69.20:0,69,903	0/0:18,0:18:54.14:0,54,672	0/0:18,0:18:54.17:0,54,724	0/0:28,0:28:56.38:0,56,404	0/0:31,0:31:42.22:0,42,329	0/0:8,0:8:17.22:0,17,86
chr10	23052030	.	G	GTCA	6398.90	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-12.347;DP=739;FS=5.149;HRun=0;HaplotypeScore=110.4133;InbreedingCoeff=0.9999;MQ=58.33;MQ0=2;MQRankSum=-1.589;QD=65.29;ReadPosRankSum=-0.638;VQSLOD=6.0421;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:90.31:0,90,1678	0/0:11,0:11:33.11:0,33,603	0/0:25,0:14:39.13:0,39,691	0/0:23,0:17:48.16:0,48,864	0/0:25,0:25:75.24:0,75,1354	0/0:32,0:32:96.32:0,96,1752	0/0:21,0:21:63.20:0,63,1130	1/1:4,22:30:90.29:2079,90,0	0/0:26,0:26:78.25:0,78,1423	0/0:29,0:29:87.30:0,87,1611	0/0:25,0:25:75.26:0,75,1385	0/0:24,0:24:69.24:0,69,1285	0/0:40,0:40:99:0,120,2222	0/0:28,0:28:84.25:0,84,1528	0/0:25,0:25:66.18:0,66,1195	0/0:42,0:42:99:0,117,2133	0/0:30,0:30:87.30:0,87,1621	0/0:19,0:19:57.20:0,57,1058	0/0:24,0:21:63.22:0,63,1163	0/0:34,0:34:99:0,102,1836	0/0:26,0:26:75.26:0,75,1398	0/0:28,0:28:78.27:0,78,1454	0/0:32,0:32:90.31:0,90,1671	0/0:14,0:14:42.11:0,42,711	0/0:26,0:26:78.26:0,78,1419	1/1:3,19:22:63.22:1527,63,0	1/1:0,27:27:66.23:1626,66,0	1/1:2,15:19:48.16:1167,48,0
chr10	23052037	.	TG	T	2312.24	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.265;DP=727;FS=10.063;HRun=1;HaplotypeScore=90.4104;InbreedingCoeff=0.9998;MQ=58.70;MQ0=2;MQRankSum=2.358;QD=35.03;ReadPosRankSum=0.518;VQSLOD=2.8169;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:90.25:0,90,1415	0/0:12,0:12:36.11:0,36,552	0/0:22,0:11:33.05:0,33,479	0/0:22,0:17:51.15:0,51,787	0/0:23,0:23:69.22:0,69,1077	0/0:34,0:34:99:0,102,1630	0/0:20,0:20:60.18:0,60,913	0/0:31,0:31:90.26:0,90,1378	0/0:24,0:24:72.25:0,72,1147	0/0:31,0:31:93.31:0,93,1449	0/0:27,0:27:81.25:0,81,1245	0/0:22,0:22:66.23:0,66,1050	0/0:39,0:39:99:0,117,1816	0/0:29,0:29:87.27:0,87,1341	1/1:0,27:27:69.23:965,69,0	1/1:0,39:39:99:1469,105,0	0/0:29,0:29:76.97:0,77,1166	0/0:18,0:18:54.18:0,54,861	0/0:21,0:18:54.18:0,54,862	0/0:34,0:34:99:0,102,1606	0/0:25,0:25:72.23:0,72,1126	0/0:27,0:27:81.25:0,81,1268	0/0:33,0:33:96.29:0,96,1483	0/0:16,0:16:48.12:0,48,735	0/0:28,0:28:84.27:0,84,1314	0/0:22,0:22:66.23:0,66,1054	0/0:24,0:24:69.20:0,69,1072	0/0:15,0:15:42.13:0,42,646
chr10	23052765	.	ACAATGT	A	2115.34	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.774;DP=609;FS=9.836;HRun=0;HaplotypeScore=120.6341;InbreedingCoeff=0.9977;MQ=82.39;MQ0=0;MQRankSum=-8.981;QD=58.76;ReadPosRankSum=1.876;VQSLOD=3.5964;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:63.22:0,63,2215	0/0:8,0:8:24.08:0,24,840	0/0:18,0:18:48.16:0,48,1446	0/0:17,0:17:39.15:0,39,1282	0/0:36,0:36:96.33:0,96,3349	0/0:34,0:34:96.33:0,96,3230	0/0:22,0:22:60.21:0,60,2089	0/0:43,0:43:99:0,111,3786	0/0:20,0:20:60.21:0,60,2111	0/0:30,0:30:87.29:0,87,2900	0/0:31,0:31:87.28:0,87,2889	0/0:25,0:25:72.20:0,72,2458	0/0:25,0:25:75.26:0,75,2534	0/0:16,0:16:48.16:0,48,1665	1/1:1,19:20:48.16:1118,48,0	1/1:0,16:16:48.16:1119,48,0	0/0:15,0:15:45.15:0,45,1534	0/0:13,0:13:33.11:0,33,1067	0/0:17,0:17:48.14:0,48,1494	0/0:33,0:33:99:0,99,3384	0/0:15,0:15:45.15:0,45,1541	0/0:16,0:16:45.15:0,45,1513	0/0:23,0:23:66.23:0,66,2284	0/0:9,0:9:24.05:0,24,763	0/0:23,0:23:66.21:0,66,2175	0/0:19,0:19:57.18:0,57,1933	0/0:29,0:29:81.28:0,81,2851	0/0:15,0:15:42.14:0,42,1484
chr10	23053067	.	ACATAC	A	3435.57	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=11.191;DP=712;FS=0.519;HRun=0;HaplotypeScore=140.2466;InbreedingCoeff=0.9975;MQ=86.80;MQ0=0;MQRankSum=-11.034;QD=58.23;ReadPosRankSum=1.397;VQSLOD=4.3182;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,117,3713	0/0:7,0:7:21.07:0,21,699	0/0:29,0:30:40.86:0,41,2208	0/0:20,0:20:60.20:0,60,1581	0/0:29,0:28:81.26:0,81,2507	0/0:27,0:27:81.28:0,81,2529	0/0:20,0:20:60.19:0,60,1664	0/0:32,0:32:96.33:0,96,2985	0/0:28,0:28:84.29:0,84,2716	0/0:28,0:28:81.28:0,81,2484	0/0:19,0:19:57.18:0,57,1771	0/0:30,0:30:90.31:0,90,2859	0/0:25,0:25:75.24:0,75,2305	0/0:25,0:25:75.26:0,75,2469	1/1:0,33:33:84.29:1922,84,0	1/1:0,26:26:69.20:1513,69,0	0/0:17,0:17:51.18:0,51,1595	0/0:10,0:10:30.10:0,30,906	0/0:21,0:21:63.22:0,63,1995	0/0:34,0:34:96.33:0,96,3059	0/0:38,0:38:99:0,114,3678	0/0:25,0:25:72.25:0,72,2330	0/0:20,0:20:57.20:0,57,1820	0/0:31,0:31:93.32:0,93,2872	0/0:25,0:25:72.25:0,72,2346	0/0:34,0:34:99:0,102,3207	0/0:28,0:27:84.27:0,84,2546	0/0:11,0:11:33.11:0,33,1099
chr10	23053235	.	AT	A	1397.82	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.379;DP=641;FS=0.000;HRun=3;HaplotypeScore=62.9861;InbreedingCoeff=0.9836;MQ=87.20;MQ0=0;MQRankSum=-5.709;QD=29.12;ReadPosRankSum=1.093;VQSLOD=2.8862;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:93.31:0,93,1339	0/0:10,0:10:30.10:0,30,432	0/0:22,0:22:60.20:0,60,838	0/0:24,0:24:66.21:0,66,910	0/0:38,0:38:99:0,114,1623	0/0:17,0:17:51.17:0,51,734	0/0:13,0:13:39.13:0,39,561	0/0:24,0:24:66.22:0,66,935	0/0:15,0:15:42.14:0,42,605	0/0:38,0:38:99:0,114,1636	0/0:20,0:20:60.20:0,60,864	0/0:24,0:24:72.23:0,72,1017	0/0:32,0:32:96.28:0,96,1339	0/0:25,0:25:75.25:0,75,1076	1/1:1,28:29:69.22:854,69,0	1/1:0,19:19:54.17:665,54,0	0/0:29,0:29:84.28:0,84,1209	0/0:6,0:5:15.05:0,15,216	0/0:23,0:23:69.21:0,69,951	0/0:31,0:31:87.29:0,87,1251	0/0:17,0:17:51.17:0,51,734	0/0:25,0:25:72.24:0,72,1036	0/0:24,0:24:69.19:0,69,970	0/0:25,0:25:72.24:0,72,1037	0/0:25,0:25:72.22:0,72,1017	0/0:27,0:27:78.26:0,78,1123	0/0:23,0:23:66.22:0,66,950	0/0:5,0:5:15.05:0,15,216
chr10	23053380	.	A	AGT	1224.27	PASS	AB=0.861;AC=27;AF=0.540;AN=50;BaseQRankSum=-2.521;DP=618;FS=6.865;HRun=0;HaplotypeScore=90.7643;InbreedingCoeff=-0.0172;MQ=65.14;MQ0=12;MQRankSum=0.501;QD=2.96;ReadPosRankSum=-2.290;VQSLOD=0.9955;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:4.56:0,5,25	0/0:13,0:18:11.36:0,11,56	./.	./.	0/1:23,0:22:22.08:28,0,22	0/1:20,10:30:41.07:92,0,41	0/1:13,4:17:22.34:79,0,22	1/1:24,0:22:4.15:19,4,0	0/1:17,0:16:24.58:29,0,25	1/1:27,0:27:12.44:96,12,0	0/0:20,0:19:5.98:0,6,53	./.	0/1:26,2:28:19.84:207,0,20	1/1:19,2:20:8.82:101,9,0	1/1:15,0:15:6.02:81,6,0	0/1:4,0:22:30.71:66,0,31	0/1:27,0:26:33.29:47,0,33	0/0:11,0:14:5.53:0,6,38	0/1:14,0:13:0:0,0,0	1/1:20,0:20:5.49:34,5,0	0/0:24,0:29:5.68:0,6,28	0/0:20,0:20:3:0,3,32	0/1:19,0:21:15.07:109,0,15	1/1:19,11:32:4.27:85,4,0	0/1:11,4:15:25.87:38,0,26	1/1:28,0:27:7.67:64,8,0	0/1:11,7:17:0.79:113,0,1	1/1:10,2:12:6.02:88,6,0
chr10	23053713	.	C	CCTTTTCCTT	2222.13	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=3.733;DP=619;FS=18.866;HRun=0;HaplotypeScore=176.7181;InbreedingCoeff=0.9955;MQ=74.62;MQ0=5;MQRankSum=-6.746;QD=85.47;ReadPosRankSum=-0.880;VQSLOD=2.0835;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:50.46:0,50,1385	0/0:11,0:11:33.11:0,33,920	0/0:38,0:29:56.38:0,56,1193	0/0:39,0:28:52.48:0,52,939	0/0:29,0:29:78.25:0,78,2123	0/0:27,0:27:72.23:0,72,2010	0/0:20,0:20:51.16:0,51,1302	0/0:26,0:26:57.17:0,57,1324	0/0:26,0:26:57.06:0,57,1545	0/0:18,0:18:48.16:0,48,1387	0/0:21,0:21:51.18:0,51,1440	0/0:18,0:18:48.14:0,48,1188	0/0:23,0:23:60.21:0,60,1677	0/0:22,0:22:57.17:0,57,1460	1/1:4,9:16:42.10:1637,42,0	1/1:5,4:10:18.06:705,18,0	0/0:19,0:19:48.16:0,48,1328	0/0:13,0:13:36.12:0,36,961	0/0:29,0:29:75.24:0,75,1998	0/0:23,0:23:57.17:0,57,1387	0/0:23,0:23:60.15:0,60,1511	0/0:22,0:22:54.18:0,54,1404	0/0:20,0:20:51.18:0,51,1383	0/0:16,0:16:42.14:0,42,1192	0/0:17,0:17:51.16:0,51,1306	0/0:27,0:27:81.27:0,81,2192	0/0:27,0:27:69.24:0,69,1970	0/0:15,0:15:36.12:0,36,1017
chr10	23053748	.	G	GTT	1521.13	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.467;DP=616;FS=1.257;HRun=9;HaplotypeScore=83.8716;InbreedingCoeff=0.9872;MQ=68.24;MQ0=0;MQRankSum=-3.506;QD=37.10;ReadPosRankSum=-2.181;VQSLOD=3.1284;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:75.11:0,75,776	0/0:10,0:10:27.07:0,27,287	0/0:19,0:16:14.08:0,14,181	0/0:22,0:15:22.73:0,23,213	0/0:24,0:24:66.15:0,66,700	0/0:22,0:22:54.12:0,54,573	0/0:17,0:17:48.12:0,48,511	0/0:23,0:23:57.10:0,57,600	0/0:20,0:22:34.43:0,34,517	0/0:26,0:26:75.17:0,75,797	0/0:24,0:25:51.01:0,51,598	0/0:17,0:17:48.12:0,48,511	0/0:21,0:21:60.12:0,60,631	0/0:24,0:24:66.16:0,66,701	1/1:0,24:26:75.14:1106,75,0	1/1:1,12:15:38.58:537,39,0	0/0:23,0:23:56.81:0,57,606	0/0:13,0:13:33.08:0,33,351	0/0:30,0:31:86.82:0,87,867	0/0:29,0:29:79.06:0,79,831	0/0:14,0:14:39.10:0,39,415	0/0:31,0:31:90.22:0,90,957	0/0:21,0:22:51.08:0,51,598	0/0:12,0:12:30.07:0,30,319	0/0:25,0:25:66.11:0,66,677	0/0:31,0:31:78.18:0,78,830	0/0:33,0:33:81.16:0,81,854	0/0:11,0:11:30.07:0,30,317
chr10	23055695	.	A	AC	6214.82	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-15.936;DP=659;FS=1.515;HRun=4;HaplotypeScore=62.6009;InbreedingCoeff=0.9878;MQ=85.87;MQ0=0;MQRankSum=-3.624;QD=36.99;ReadPosRankSum=0.543;VQSLOD=4.9074;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:96.27:0,96,1083	0/0:13,0:13:36.08:0,36,396	0/0:18,0:18:48.13:0,48,538	0/0:25,0:25:65.87:0,66,684	0/0:28,0:28:78.22:0,78,884	0/0:21,0:21:63.18:0,63,715	0/0:15,0:15:45.13:0,45,510	1/1:3,40:43:99:1523,114,0	0/0:26,0:26:72.19:0,72,805	0/0:37,0:37:99:0,111,1259	0/0:22,0:22:60.17:0,60,677	0/0:23,0:23:63.18:0,63,714	0/0:35,0:35:96.27:0,96,1085	0/0:16,0:16:48.14:0,48,544	1/1:1,27:28:78.26:1067,78,0	1/1:3,27:29:81.27:1102,81,0	0/0:23,0:23:60.14:0,60,665	0/0:6,0:6:9.02:0,9,102	0/0:22,0:22:60.14:0,60,655	0/0:23,0:23:66.17:0,66,739	0/0:19,0:19:51.14:0,51,578	0/0:22,0:22:63.18:0,63,713	0/0:22,0:22:59.71:0,60,679	0/0:19,0:19:54.15:0,54,612	0/0:17,0:17:48.14:0,48,544	1/1:0,24:24:69.21:925,69,0	1/1:0,35:35:93.31:1269,93,0	1/1:0,8:8:24.08:328,24,0
chr10	23055951	.	CA	C	3526.31	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=14.102;DP=670;FS=3.676;HRun=2;HaplotypeScore=89.1238;InbreedingCoeff=0.9986;MQ=85.28;MQ0=0;MQRankSum=-0.985;QD=36.35;ReadPosRankSum=0.661;VQSLOD=4.0816;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:96.33:0,96,1435	0/0:9,0:9:27.08:0,27,388	0/0:26,1:28:43.30:0,43,913	0/0:21,1:21:24.54:0,25,765	0/0:23,0:23:69.21:0,69,993	0/0:22,0:22:66.22:0,66,989	0/0:22,0:22:66.22:0,66,971	1/1:0,23:23:66.20:842,66,0	0/0:26,0:26:78.23:0,78,1142	0/0:39,0:39:99:0,111,1647	0/0:25,0:25:69.23:0,69,1034	0/0:25,0:25:75.24:0,75,1101	0/0:31,0:31:93.30:0,93,1374	0/0:18,0:18:54.18:0,54,810	0/0:33,0:33:96.33:0,96,1436	0/0:25,0:25:72.24:0,72,1060	0/0:17,0:17:48.16:0,48,713	0/0:8,0:8:24.08:0,24,355	0/0:19,0:19:51.16:0,51,745	0/0:31,0:31:90.30:0,90,1349	0/0:14,0:14:42.14:0,42,629	0/0:29,0:29:84.28:0,84,1259	0/0:37,0:37:99:0,111,1643	0/0:22,0:22:66.22:0,66,989	0/0:16,0:16:42.14:0,42,625	1/1:0,24:24:66.21:857,66,0	1/1:0,34:34:93.16:1206,93,0	1/1:0,16:16:48.16:622,48,0
chr10	23056076	.	AGAG	A	2720.44	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=11.706;DP=657;FS=6.997;HRun=0;HaplotypeScore=93.9375;InbreedingCoeff=0.9657;MQ=64.06;MQ0=2;MQRankSum=-2.225;QD=26.67;ReadPosRankSum=-1.010;VQSLOD=2.8301;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:45:99:0,105,2075	0/0:6,0:6:12.04:0,12,237	0/0:30,0:19:38.12:0,38,661	0/0:30,0:26:45.93:0,46,808	0/0:19,0:19:42.11:0,42,737	0/0:33,0:33:87.27:0,87,1705	0/0:21,0:21:57.20:0,57,1157	1/1:8,23:30:66.13:831,66,0	0/0:26,0:26:66.23:0,66,1334	0/0:20,0:19:39.13:0,39,768	0/0:20,0:20:57.20:0,57,1159	0/0:36,0:36:99:0,105,2106	0/0:25,0:25:69.21:0,69,1350	0/0:20,0:20:54.12:0,54,1014	0/0:18,0:18:45.13:0,45,849	0/0:27,0:27:78.23:0,78,1528	0/0:25,0:25:74.99:0,75,1306	0/0:7,0:7:15:0,15,213	0/0:18,0:18:33.09:0,33,580	0/0:18,0:18:45.14:0,45,873	0/0:29,0:29:78.27:0,78,1562	0/0:21,0:21:54.16:0,54,1038	0/0:26,0:26:72.22:0,72,1350	0/0:13,0:13:27.09:0,27,559	0/0:21,0:21:54.19:0,54,1098	1/1:10,16:26:60.20:860,60,0	1/1:5,23:28:42.14:618,42,0	1/1:3,14:17:7.82:566,8,0
chr10	23056579	.	T	TG	5443.78	PASS	AB=0.537;AC=11;AF=0.196;AN=56;BaseQRankSum=11.897;DP=652;FS=1.989;HRun=0;HaplotypeScore=87.1045;InbreedingCoeff=0.9084;MQ=63.56;MQ0=1;MQRankSum=-1.008;QD=38.07;ReadPosRankSum=-1.226;VQSLOD=4.5850;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,1:18:8.85:0,9,591	0/0:13,0:13:39.13:0,39,545	0/0:16,0:12:33.63:0,34,388	0/0:24,0:17:41.45:0,41,484	0/0:36,0:36:98.16:0,98,1281	0/0:22,0:22:63.18:0,63,844	0/0:17,0:17:49.05:0,49,673	1/1:10,29:39:99:1457,114,0	0/0:30,0:30:90.30:0,90,1251	0/0:27,0:27:78.24:0,78,1049	0/0:23,0:23:64.45:0,64,865	0/0:25,0:25:75.22:0,75,999	0/0:26,0:26:78.26:0,78,1090	0/0:29,0:29:84.26:0,84,1141	1/1:6,22:28:84.24:1157,84,0	1/1:6,17:23:67.41:884,67,0	0/0:18,0:18:51.16:0,51,693	0/0:10,0:10:27.97:0,28,363	0/0:27,0:25:75.23:0,75,1031	0/0:30,0:30:87.27:0,87,1184	0/0:13,0:13:36.12:0,36,500	0/0:16,0:16:48.15:0,48,656	0/0:30,0:30:90.27:0,90,1208	0/0:24,0:24:72.23:0,72,990	0/0:35,0:35:99:0,105,1451	0/1:3,19:22:3.36:773,0,3	1/1:9,17:26:72.01:962,72,0	1/1:0,5:5:15.05:212,15,0
chr10	23056583	.	GTTT	G	3732.32	PASS	AB=0.789;AC=12;AF=0.214;AN=56;BaseQRankSum=15.979;DP=645;FS=2.213;HRun=10;HaplotypeScore=119.1348;InbreedingCoeff=0.7883;MQ=62.42;MQ0=1;MQRankSum=-5.581;QD=22.90;ReadPosRankSum=-0.395;VQSLOD=1.9701;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:45.15:0,45,877	0/0:13,0:13:39.10:0,39,712	0/0:16,0:12:14.28:0,14,392	0/1:23,0:16:10.55:11,0,340	0/0:35,0:35:93.14:0,93,1769	0/0:22,0:22:54.18:0,54,1055	0/0:17,0:17:39.13:0,39,778	1/1:18,23:41:99:972,101,0	0/0:30,0:30:83.95:0,84,1647	0/0:25,0:25:66.22:0,66,1300	0/0:20,0:21:48.16:0,48,919	0/0:25,0:26:75.16:0,75,1308	0/0:27,0:27:54.19:0,54,1099	0/0:26,0:28:75.26:0,75,1527	1/1:7,18:25:63.07:768,63,0	1/1:8,14:22:59.90:665,60,0	0/0:19,0:20:51.16:0,51,968	0/0:11,0:11:30.05:0,30,523	0/0:27,0:25:69.23:0,69,1365	0/0:29,0:29:84.25:0,84,1569	0/0:14,0:16:39.11:0,39,695	0/0:14,0:14:39.02:0,39,723	0/0:29,0:29:84.04:0,84,1549	0/0:25,0:25:69.24:0,69,1402	0/0:34,0:34:92.33:0,92,1770	0/1:6,16:22:60.85:579,0,61	1/1:13,12:25:46.38:550,46,0	1/1:0,5:5:15.05:187,15,0
chr10	23056586	.	T	TG	3909.36	PASS	AB=0.955;AC=11;AF=0.196;AN=56;BaseQRankSum=16.460;DP=641;FS=3.719;HRun=0;HaplotypeScore=91.5234;InbreedingCoeff=0.8807;MQ=63.91;MQ0=1;MQRankSum=-8.091;QD=27.92;ReadPosRankSum=0.616;VQSLOD=3.9462;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:47.89:0,48,616	0/0:13,0:13:39.11:0,39,514	0/0:16,0:12:16.13:0,16,296	0/0:25,0:18:41.66:0,42,423	0/0:32,0:32:90.21:0,90,1226	0/0:21,0:21:63.17:0,63,816	0/0:16,0:16:47.97:0,48,609	1/1:32,11:43:99:1190,105,0	0/0:31,0:31:93.27:0,93,1226	0/0:26,0:26:75.22:0,75,992	0/0:21,0:21:54.69:0,55,713	0/0:26,0:26:70.41:0,70,928	0/0:25,0:25:72.15:0,72,905	0/0:28,0:28:75.79:0,76,1052	1/1:24,1:25:44.97:704,45,0	1/1:18,5:23:48.87:680,49,0	0/0:21,0:21:56.19:0,56,763	0/0:12,0:12:32.39:0,32,383	0/0:26,0:24:72.22:0,72,974	0/0:29,0:29:87.24:0,87,1134	0/0:16,0:16:38.88:0,39,512	0/0:14,0:14:42.12:0,42,542	0/0:29,0:29:81.35:0,81,1101	0/0:24,0:24:72.23:0,72,987	0/0:33,0:33:98.32:0,98,1274	0/1:20,1:21:29.24:561,0,29	1/1:19,4:23:41.12:596,41,0	1/1:5,0:5:15.05:177,15,0
chr10	23056883	.	TC	T	1441.19	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.044;DP=756;FS=3.483;HRun=5;HaplotypeScore=93.7676;InbreedingCoeff=0.9985;MQ=82.58;MQ0=0;MQRankSum=-0.530;QD=28.26;ReadPosRankSum=2.009;VQSLOD=3.9735;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,129,1640	0/0:8,0:8:24.08:0,24,325	0/0:18,0:18:45.06:0,45,520	0/0:25,0:25:63.16:0,63,776	0/0:47,0:47:99:0,132,1745	0/0:24,0:24:63.11:0,63,811	0/0:25,0:25:69.20:0,69,900	0/0:30,0:30:89.47:0,89,707	0/0:22,0:22:66.22:0,66,892	0/0:34,0:34:95.88:0,96,1248	0/0:27,0:27:72.23:0,72,957	0/0:29,0:29:84.27:0,84,1116	0/0:44,0:44:99:0,126,1641	0/0:29,0:29:87.26:0,87,1129	1/1:0,31:31:87.25:985,87,0	1/1:0,20:20:51.15:578,51,0	0/0:34,0:34:99:0,102,1344	0/0:12,0:12:33.11:0,33,446	0/0:15,0:15:42.14:0,42,569	0/0:32,0:32:96.32:0,96,1294	0/0:18,0:18:51.16:0,51,674	0/0:16,0:16:48.16:0,48,649	0/0:17,0:17:45.11:0,45,561	0/0:44,0:44:99:0,120,1593	0/0:34,0:34:99:0,99,1308	0/0:37,0:37:99:0,102,793	0/0:25,0:25:64.43:0,64,480	0/0:13,0:13:29.79:0,30,226
chr10	23056945	.	GT	G	3852.68	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=12.536;DP=743;FS=2.874;HRun=2;HaplotypeScore=75.4151;InbreedingCoeff=0.9869;MQ=83.57;MQ0=0;MQRankSum=-4.796;QD=36.35;ReadPosRankSum=-2.179;VQSLOD=3.3778;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,135,2023	0/0:11,0:11:30.10:0,30,450	0/0:18,0:18:51.14:0,51,714	0/0:25,0:25:72.22:0,72,1048	0/0:28,0:28:84.28:0,84,1259	0/0:26,0:26:78.26:0,78,1167	0/0:29,0:29:87.26:0,87,1246	1/1:2,32:34:96.31:1247,96,0	0/0:23,0:23:69.23:0,69,1033	0/0:25,0:25:72.24:0,72,1061	0/0:18,0:18:54.18:0,54,808	0/0:24,0:24:72.24:0,72,1079	0/0:48,0:48:99:0,141,2080	0/0:32,0:32:96.33:0,96,1436	0/0:23,0:23:63.21:0,63,944	0/0:25,0:25:69.23:0,69,1034	0/0:25,0:25:69.23:0,69,1034	0/0:5,0:5:12.04:0,12,180	0/0:27,0:27:81.27:0,81,1195	0/0:36,0:36:99:0,105,1563	0/0:13,0:13:39.13:0,39,570	0/0:27,0:27:81.27:0,81,1212	0/0:37,0:37:99:0,108,1617	0/0:31,0:32:93.32:0,93,1393	0/0:34,0:34:99:0,102,1491	1/1:2,32:34:99:1284,99,0	1/1:0,31:31:87.28:1127,87,0	1/1:0,7:7:15.05:194,15,0
chr10	23057866	.	TA	T	3221.92	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=13.287;DP=613;FS=7.064;HRun=10;HaplotypeScore=62.9314;InbreedingCoeff=0.9918;MQ=76.74;MQ0=0;MQRankSum=-1.814;QD=19.29;ReadPosRankSum=0.099;VQSLOD=4.4700;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,16:17:47.98:417,48,0	0/0:9,0:9:27.07:0,27,299	0/0:18,0:18:28.37:0,28,265	0/0:12,0:12:20.87:0,21,197	0/0:25,0:25:66.11:0,66,700	0/0:27,1:28:52.17:0,52,804	0/0:17,0:17:42.11:0,42,463	1/1:10,22:32:65.91:559,66,0	0/0:20,0:20:54.15:0,54,597	0/0:28,0:28:75.18:0,75,808	0/0:30,0:30:81.22:0,81,896	0/0:27,0:27:59.95:0,60,643	0/0:19,0:19:51.14:0,51,564	0/0:27,1:28:42.93:0,43,683	1/1:6,23:29:62.97:547,63,0	1/1:3,22:25:26.80:462,27,0	0/0:18,0:18:54.09:0,54,574	0/0:20,0:20:47.87:0,48,509	0/0:16,0:16:39.11:0,39,431	0/0:26,1:27:43.13:0,43,697	0/0:29,0:29:75.20:0,75,830	0/0:16,0:16:12.71:0,13,281	0/0:22,2:24:17.02:0,17,629	0/0:9,0:9:27.04:0,27,278	0/0:25,1:26:43.14:0,43,704	1/1:2,22:24:65.94:566,66,0	1/1:1,21:22:56.68:494,57,0	1/1:3,15:18:44.88:376,45,0
chr10	23059065	.	GGTGTGTGT	G	246.03	PASS	AB=0.909;AC=3;AF=0.058;AN=52;BaseQRankSum=1.509;DP=600;FS=3.521;HRun=0;HaplotypeScore=168.6350;InbreedingCoeff=0.3032;MQ=65.83;MQ0=9;MQRankSum=-2.440;QD=6.00;ReadPosRankSum=1.502;VQSLOD=2.8022;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:25:30:0,30,398	0/0:6,0:11:9.02:0,9,234	./.	./.	0/0:22,0:22:11.57:0,12,284	0/0:21,0:21:6.49:0,6,209	0/0:25,0:24:12.49:0,12,255	0/0:24,0:22:16.08:0,16,129	0/0:19,0:19:16.63:0,17,363	0/0:25,0:24:33.57:0,34,949	0/0:14,0:14:3.01:0,3,78	0/0:30,0:30:21.50:0,21,591	0/0:12,0:11:11.79:0,12,243	0/0:17,0:19:3.37:0,3,113	1/1:12,9:21:6.02:150,6,0	0/1:17,2:20:99:189,0,100	0/0:23,0:23:36.02:0,36,844	0/0:3,0:9:9.03:0,9,264	0/0:22,0:21:12.91:0,13,337	0/0:31,0:30:29.46:0,29,802	0/0:28,0:27:30.03:0,30,700	0/0:26,0:26:7.90:0,8,248	0/0:17,0:17:8.79:0,9,74	0/0:32,0:30:31.34:0,31,682	0/0:21,0:23:18.01:0,18,304	0/0:24,0:23:35.67:0,36,549	0/0:19,0:19:37.55:0,38,1014	0/0:9,0:9:24.91:0,25,561
chr10	23059266	.	CAGGGATCCGCCAATCCCGTG	C	3687.14	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.911;DP=678;FS=1.752;HRun=0;HaplotypeScore=336.8671;InbreedingCoeff=0.9943;MQ=85.92;MQ0=0;MQRankSum=-7.773;QD=64.69;ReadPosRankSum=3.565;VQSLOD=2.2362;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:87.28:0,87,7519	0/0:8,0:8:24.07:0,24,1705	0/0:22,0:21:51.17:0,51,3667	0/0:25,0:25:69.24:0,69,4195	0/0:21,0:21:57.20:0,57,4755	0/0:18,0:18:42.14:0,42,3421	0/0:22,0:22:63.22:0,63,5356	0/0:35,0:35:96.32:0,96,6899	0/0:28,0:28:75.26:0,75,5755	0/0:23,0:23:66.22:0,66,5253	0/0:16,0:16:42.14:0,42,3415	0/0:32,0:32:93.30:0,93,7937	0/0:28,0:28:78.27:0,78,6058	0/0:22,0:22:66.23:0,66,5325	1/1:6,25:31:30.10:1676,30,0	1/1:6,20:26:36.12:2011,36,0	0/0:23,0:23:69.19:0,69,5684	0/0:14,0:14:36.12:0,36,3155	0/0:22,0:22:57.19:0,57,4121	0/0:24,0:24:63.21:0,63,5131	0/0:49,0:49:99:0,132,9740	0/0:22,0:22:57.18:0,57,4473	0/0:12,0:12:33.11:0,33,2648	0/0:41,0:41:99:0,105,9373	0/0:15,0:15:45.15:0,45,3997	0/0:27,0:27:78.26:0,78,5860	0/0:32,0:32:87.28:0,87,7481	0/0:6,0:6:18.06:0,18,1725
chr10	23060106	.	CACTT	C	3420.68	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=11.299;DP=663;FS=0.000;HRun=0;HaplotypeScore=107.1913;InbreedingCoeff=0.9872;MQ=86.88;MQ0=0;MQRankSum=-6.879;QD=44.42;ReadPosRankSum=2.884;VQSLOD=3.8116;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,17:20:39.13:717,39,0	0/0:5,0:5:12.04:0,12,310	0/0:29,0:28:62.76:0,63,1372	0/0:28,0:26:54.11:0,54,1221	0/0:32,0:32:87.28:0,87,2136	0/0:32,0:32:90.31:0,90,2346	0/0:17,0:17:45.15:0,45,1146	0/0:30,0:29:75.25:0,75,1915	0/0:28,0:28:75.26:0,75,1952	0/0:28,0:28:81.28:0,81,2113	0/0:9,0:9:27.08:0,27,658	0/0:23,0:23:69.22:0,69,1756	0/0:27,0:27:81.28:0,81,2139	0/0:33,0:33:93.32:0,93,2448	1/1:1,27:28:72.25:1324,72,0	1/1:2,27:28:75.26:1379,75,0	0/0:26,0:26:72.25:0,72,1876	0/0:8,0:8:21.07:0,21,511	0/0:26,0:26:72.22:0,72,1738	0/0:13,0:13:36.12:0,36,920	0/0:18,0:18:54.19:0,54,1416	0/0:16,0:16:48.16:0,48,1196	0/0:20,0:20:54.19:0,54,1394	0/0:31,0:31:87.30:0,87,2290	0/0:27,0:27:81.28:0,81,2126	0/0:31,0:31:78.27:0,78,2033	0/0:38,0:37:99:0,102,2578	0/0:11,0:11:33.11:0,33,871
chr10	23060484	.	A	AG	863.65	PASS	AC=26;AF=0.500;AN=52;BaseQRankSum=-5.573;DP=89;FS=2.917;HRun=6;HaplotypeScore=12.9777;InbreedingCoeff=0.6378;MQ=72.77;MQ0=1;MQRankSum=-0.271;QD=24.68;ReadPosRankSum=-1.427;VQSLOD=1.1867;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,2:2:6.02:75,6,0	0/0:4,0:4:12:0,12,113	0/0:2,0:1:2.04:0,2,6	0/0:5,0:2:4.54:0,5,27	1/1:2,0:2:6.01:62,6,0	1/1:0,2:2:3.01:38,3,0	1/1:0,5:5:12.04:151,12,0	0/0:13,0:13:33.04:0,33,331	./.	1/1:0,3:3:6.02:75,6,0	0/0:2,0:2:6.01:0,6,61	1/1:1,3:4:6.02:75,6,0	1/1:0,1:2:6.02:73,6,0	1/1:0,1:1:3.01:38,3,0	1/1:0,2:2:6.02:75,6,0	1/1:0,2:2:3.01:38,3,0	0/0:5,0:5:9.02:0,9,91	0/0:4,0:4:9.02:0,9,92	0/0:4,0:4:12.03:0,12,122	0/0:6,0:6:18.04:0,18,184	0/0:1,0:1:3.01:0,3,31	./.	1/1:0,4:4:9.03:113,9,0	1/1:0,2:2:6.02:75,6,0	1/1:0,4:4:12.04:151,12,0	0/0:1,0:1:3.01:0,3,31	0/0:4,0:4:12.03:0,12,122	0/0:2,0:2:6.01:0,6,61
chr10	23061128	.	T	TA	4371.82	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-13.195;DP=617;FS=6.566;HRun=8;HaplotypeScore=59.2699;InbreedingCoeff=0.9510;MQ=71.09;MQ0=0;MQRankSum=-1.123;QD=25.42;ReadPosRankSum=-2.116;VQSLOD=4.8664;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,25:29:66.20:760,66,0	0/0:14,0:14:38.97:0,39,349	0/0:9,0:8:10.69:0,11,66	0/0:8,0:8:9.85:0,10,59	0/0:32,0:32:87.03:0,87,793	0/0:32,1:33:55.42:0,55,762	0/0:20,0:20:48.01:0,48,436	1/1:12,28:40:81.21:913,81,0	0/0:20,0:20:51.02:0,51,466	0/0:25,0:25:62.66:0,63,568	0/0:24,0:24:65.71:0,66,597	0/0:17,0:17:51.03:0,51,467	0/0:20,0:20:57.03:0,57,522	0/0:31,0:31:81.02:0,81,737	1/1:3,25:28:66.20:762,66,0	1/1:2,16:18:45.13:519,45,0	0/0:14,0:14:36.02:0,36,329	0/0:9,0:9:24.01:0,24,219	0/0:22,0:23:53.06:0,53,473	0/0:27,0:27:75.03:0,75,683	0/0:25,0:25:69.04:0,69,631	0/0:22,0:22:53.99:0,54,484	0/0:26,0:26:60.01:0,60,549	0/0:20,0:20:60.03:0,60,549	0/0:26,0:26:72.01:0,72,653	1/1:4,15:19:45.13:519,45,0	1/1:2,31:33:75.05:865,75,0	1/1:4,1:5:3.01:35,3,0
chr10	23061256	.	AT	A	9121.23	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=12.905;DP=610;FS=18.699;HRun=4;HaplotypeScore=58.9976;InbreedingCoeff=0.9999;MQ=83.74;MQ0=0;MQRankSum=-3.382;QD=32.93;ReadPosRankSum=1.724;VQSLOD=3.1123;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,17:18:48.15:576,48,0	1/1:0,10:10:30.09:360,30,0	0/0:23,0:23:60.36:0,60,837	0/0:15,0:15:36.09:0,36,453	0/0:33,0:33:93.28:0,93,1265	0/0:39,0:39:99:0,114,1574	0/0:21,0:20:57.16:0,57,775	1/1:1,34:35:99:1180,102,0	0/0:15,0:15:45.15:0,45,623	0/0:20,0:20:60.20:0,60,837	0/0:28,0:28:84.25:0,84,1142	0/0:15,0:15:45.15:0,45,630	0/0:18,0:18:54.18:0,54,753	0/0:17,0:17:51.16:0,51,698	1/1:0,22:22:60.18:720,60,0	1/1:1,16:17:42.13:504,42,0	1/1:2,18:20:54.17:648,54,0	1/1:0,18:18:45.14:539,45,0	1/1:1,20:21:60.17:709,60,0	1/1:0,23:23:63.19:756,63,0	1/1:0,18:18:51.16:612,51,0	0/0:24,0:24:72.22:0,72,976	0/0:19,0:19:54.18:0,54,756	0/0:20,0:20:48.16:0,48,669	0/0:26,0:26:78.24:0,78,1053	1/1:1,18:19:54.16:648,54,0	1/1:1,31:32:87.27:1044,87,0	1/1:0,23:23:69.21:827,69,0
chr10	23062471	.	A	AC	2790.47	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=6.822;DP=573;FS=8.838;HRun=8;HaplotypeScore=60.7817;InbreedingCoeff=0.8948;MQ=85.07;MQ0=0;MQRankSum=-1.559;QD=17.12;ReadPosRankSum=0.304;VQSLOD=2.9764;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,0:18:38.90:305,39,0	0/0:8,0:8:21:0,21,192	0/0:18,0:18:47.81:0,48,418	0/0:20,0:20:20.21:0,20,273	0/0:28,0:28:78.03:0,78,708	0/0:19,0:19:57.03:0,57,522	0/0:18,0:18:48.02:0,48,439	1/1:32,0:32:84.39:506,84,0	0/0:15,0:15:45.02:0,45,412	0/0:29,0:29:78.03:0,78,714	0/0:26,0:27:65.05:0,65,582	0/0:13,0:13:33.02:0,33,302	0/0:23,0:23:57:0,57,516	0/0:16,0:16:36:0,36,329	1/1:2,15:17:33.10:381,33,0	1/1:2,25:27:63.19:727,63,0	0/0:14,0:14:39:0,39,352	0/0:5,0:5:15.01:0,15,137	0/0:21,0:21:54.01:0,54,490	0/0:32,0:32:93.03:0,93,845	0/0:16,0:16:42.01:0,42,384	0/0:22,0:22:57.02:0,57,521	0/0:32,0:32:90.05:0,90,823	0/0:8,0:9:23.05:0,23,198	0/0:25,0:25:75.04:0,75,686	0/1:20,0:20:29.68:200,0,30	1/1:28,0:28:63.06:551,63,0	1/1:21,0:21:47.39:311,47,0
chr10	23062472	.	C	CT	4024.32	PASS	AB=0.776;AC=10;AF=0.179;AN=56;BaseQRankSum=-7.273;DP=581;FS=8.978;HRun=0;HaplotypeScore=57.6167;InbreedingCoeff=0.7170;MQ=84.73;MQ0=0;MQRankSum=-2.606;QD=27.01;ReadPosRankSum=0.890;VQSLOD=3.8426;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:10.04:0,10,43	0/0:8,0:8:24.07:0,24,320	0/0:19,0:19:54.06:0,54,691	0/0:19,0:19:25.29:0,25,512	0/0:28,0:28:84.26:0,84,1133	0/0:19,0:19:57.19:0,57,788	0/0:18,0:18:54.14:0,54,717	1/1:0,31:32:96.27:1335,96,0	0/0:15,0:15:45.15:0,45,622	0/0:30,0:30:84.26:0,84,1121	0/0:27,0:27:81.12:0,81,1017	0/0:13,0:13:39.11:0,39,513	0/0:23,0:23:69.17:0,69,887	0/0:17,0:17:48.04:0,48,594	0/1:17,0:17:19.30:54,0,19	1/1:27,0:27:6.11:131,6,0	0/0:14,0:14:42.09:0,42,559	0/0:5,0:5:15.05:0,15,207	0/0:23,0:23:63.17:0,63,826	0/0:32,0:32:96.30:0,96,1301	0/0:16,0:16:48.13:0,48,631	0/0:22,0:22:66.19:0,66,867	0/0:32,0:32:93.30:0,93,1279	0/0:9,0:9:26.99:0,27,324	0/0:25,0:25:75.25:0,75,1043	0/1:4,17:21:65.41:647,0,65	1/1:1,27:28:63.48:1156,63,0	1/1:3,21:24:48.15:702,48,0
chr10	23062749	.	AT	A	204.57	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.319;DP=644;FS=1.245;HRun=4;HaplotypeScore=67.2297;InbreedingCoeff=0.9645;MQ=82.76;MQ0=1;MQRankSum=-1.193;QD=20.46;ReadPosRankSum=-0.349;VQSLOD=2.9285;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,9:10:27.07:299,27,0	0/0:8,0:8:24.07:0,24,319	0/0:20,0:21:55.27:0,55,660	0/0:20,0:19:47.91:0,48,582	0/0:34,0:34:99:0,99,1385	0/0:32,0:32:93.29:0,93,1263	0/0:12,0:12:36.12:0,36,504	0/0:29,0:29:84.25:0,84,1130	0/0:16,0:16:48.15:0,48,641	0/0:33,0:33:93.29:0,93,1255	0/0:29,0:29:84.25:0,84,1155	0/0:23,0:23:66.22:0,66,921	0/0:31,0:31:87.28:0,87,1198	0/0:26,0:26:78.21:0,78,1037	0/0:25,0:25:63.20:0,63,866	0/0:26,0:26:75.22:0,75,1014	0/0:18,0:18:54.11:0,54,729	0/0:4,0:4:11.99:0,12,145	0/0:16,0:16:48.16:0,48,671	0/0:33,0:33:90.30:0,90,1258	0/0:8,0:8:24.06:0,24,315	0/0:17,0:17:51.13:0,51,677	0/0:33,0:33:99:0,99,1366	0/0:23,0:23:63.20:0,63,863	0/0:29,0:29:87.26:0,87,1181	0/0:41,0:41:99:0,117,1623	0/0:37,0:37:99:0,99,1362	0/0:10,0:10:30.10:0,30,419
chr10	23062814	.	TG	T	5299.05	PASS	AB=0.519;AC=11;AF=0.196;AN=56;BaseQRankSum=10.935;DP=623;FS=1.566;HRun=2;HaplotypeScore=65.5394;InbreedingCoeff=0.9066;MQ=83.68;MQ0=0;MQRankSum=-1.852;QD=35.33;ReadPosRankSum=-2.110;VQSLOD=4.4284;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:33.11:0,33,494	0/0:6,0:6:18.05:0,18,250	0/0:25,0:24:69.04:0,69,920	0/0:23,0:23:29.93:0,30,833	0/0:28,0:28:81.27:0,81,1214	0/0:37,0:37:99:0,102,1528	0/0:8,0:8:24.07:0,24,339	1/1:0,40:40:99:1451,114,0	0/0:18,0:18:51.16:0,51,744	0/0:26,0:26:75.25:0,75,1105	0/0:30,0:30:87.11:0,87,1229	0/0:21,0:21:60.20:0,60,893	0/0:31,0:31:90.25:0,90,1304	0/0:24,0:24:63.17:0,63,907	1/1:0,28:28:81.26:1051,81,0	1/1:0,25:25:72.23:934,72,0	0/0:21,0:21:63.14:0,63,891	0/0:6,0:6:15.05:0,15,224	0/0:24,0:24:69.23:0,69,1034	0/0:27,0:27:81.26:0,81,1192	0/0:11,0:11:30.09:0,30,429	0/0:21,0:21:51.10:0,51,737	0/0:26,0:26:69.22:0,69,1013	0/0:22,0:22:48.15:0,48,704	0/0:27,0:27:75.25:0,75,1124	0/1:2,26:28:5.66:914,0,6	1/1:1,19:20:48:602,48,0	1/1:0,9:9:27.09:347,27,0
chr10	23062869	.	TATCATCATC	T	11119.04	PASS	AB=0.828;AC=34;AF=0.630;AN=54;BaseQRankSum=4.661;DP=604;FS=8.473;HRun=0;HaplotypeScore=191.0193;InbreedingCoeff=0.8266;MQ=51.54;MQ0=4;MQRankSum=-8.789;QD=27.12;ReadPosRankSum=0.065;VQSLOD=3.8020;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:11,5:16:9.03:243,9,0	0/0:8,0:8:21.07:0,21,942	./.	0/0:23,0:17:2.99:0,3,27	1/1:12,16:28:33.07:790,33,0	1/1:15,14:31:33.11:863,33,0	1/1:13,9:22:9.03:245,9,0	0/1:22,0:21:0:0,0,0	0/1:9,0:19:6.04:6,0,59	1/1:13,12:26:39.12:896,39,0	1/1:10,13:23:34.58:768,35,0	1/1:9,10:19:30.10:819,30,0	1/1:6,19:26:51.17:1372,51,0	1/1:11,15:26:39.13:1065,39,0	0/0:20,0:27:36.12:0,36,1388	0/0:19,0:29:45.15:0,45,1517	0/0:6,0:17:18.06:0,18,345	0/0:2,0:6:6.02:0,6,115	0/0:15,0:13:24.08:0,24,1002	0/0:32,0:32:54.17:0,54,2158	0/0:18,0:18:45.15:0,45,1962	1/1:8,15:25:42.10:1044,42,0	1/1:13,14:27:22.54:479,23,0	1/1:15,11:26:9.03:245,9,0	1/1:11,9:21:15.05:388,15,0	1/1:13,0:19:25.50:459,26,0	1/1:8,0:27:60.21:1248,60,0	1/1:4,0:7:9.03:187,9,0
chr10	23065980	.	TA	T	3524.86	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=9.017;DP=728;FS=17.582;HRun=2;HaplotypeScore=72.5553;InbreedingCoeff=0.9701;MQ=78.19;MQ0=0;MQRankSum=1.009;QD=34.90;ReadPosRankSum=-2.344;VQSLOD=1.4408;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,99,1406	0/0:12,0:12:36.09:0,36,517	0/0:18,0:18:51.15:0,51,668	0/0:15,0:15:45.14:0,45,626	0/0:33,0:33:96.32:0,96,1420	0/0:39,0:39:99:0,114,1705	0/0:14,0:14:42.14:0,42,628	1/1:0,28:28:84.23:1047,84,0	0/0:26,0:26:78.25:0,78,1148	0/0:24,0:24:72.24:0,72,1079	0/0:27,0:27:81.27:0,81,1196	0/0:26,0:26:78.25:0,78,1149	0/0:33,0:33:96.31:0,96,1415	0/0:23,0:23:69.23:0,69,1025	0/0:43,0:43:99:0,129,1890	0/0:45,0:45:99:0,132,1919	0/0:25,0:25:66.21:0,66,970	0/0:26,0:26:69.23:0,69,1031	0/0:14,0:14:42.13:0,42,612	0/0:29,0:29:87.29:0,87,1302	0/0:24,0:24:69.18:0,69,989	0/0:22,0:22:66.22:0,66,971	0/0:24,0:24:72.23:0,72,1058	0/0:19,0:19:57.18:0,57,834	0/0:32,0:32:96.33:0,96,1435	1/1:0,34:34:99:1309,102,0	1/1:0,35:35:84.27:1090,84,0	1/1:0,4:4:6.02:78,6,0
chr10	23066139	.	AC	A	8146.30	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=17.647;DP=575;FS=1.409;HRun=1;HaplotypeScore=80.3770;InbreedingCoeff=0.9934;MQ=70.41;MQ0=0;MQRankSum=0.449;QD=30.51;ReadPosRankSum=2.751;VQSLOD=4.6997;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:75.26:0,75,1196	0/0:7,0:7:21.07:0,21,335	0/0:10,0:10:24.08:0,24,354	0/0:11,0:11:23.12:0,23,307	1/1:2,32:34:96.29:1128,96,0	1/1:1,24:25:60.18:701,60,0	1/1:1,10:11:30.09:350,30,0	0/0:30,0:30:87.22:0,87,1239	1/1:0,12:12:33.10:385,33,0	1/1:4,24:28:72.20:830,72,0	1/1:0,26:26:75.18:860,75,0	1/1:2,14:16:42.12:491,42,0	1/1:1,25:26:69.20:805,69,0	1/1:1,20:21:48.14:561,48,0	0/0:31,0:31:93.30:0,93,1448	0/0:26,0:26:78.19:0,78,1124	0/0:16,0:16:48.08:0,48,735	0/0:24,0:24:72.18:0,72,1120	0/0:15,0:15:45.15:0,45,718	0/0:18,0:18:54.17:0,54,836	0/0:13,0:13:39.13:0,39,620	1/1:1,20:21:48.10:545,48,0	1/1:2,24:26:75.21:866,75,0	1/1:2,9:11:29.98:320,30,0	1/1:2,8:10:27.07:307,27,0	0/0:25,2:27:11.18:0,11,1079	0/0:39,0:39:99:0,117,1859	0/0:16,0:16:45.15:0,45,718
chr10	23066370	.	GA	G	2090.22	PASS	AB=0.688;AC=8;AF=0.143;AN=56;BaseQRankSum=10.805;DP=538;FS=0.426;HRun=9;HaplotypeScore=54.2646;InbreedingCoeff=0.7899;MQ=82.57;MQ0=0;MQRankSum=0.791;QD=20.29;ReadPosRankSum=-3.117;VQSLOD=2.7499;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:33.10:0,33,381	0/0:14,0:14:36.09:0,36,399	0/0:20,0:20:15.66:0,16,290	0/1:7,2:10:14.20:14,0,85	0/0:46,0:46:99:0,129,1468	0/0:25,0:25:63.19:0,63,727	0/0:11,0:11:33.10:0,33,381	1/1:2,26:28:78:706,78,0	0/0:16,0:16:48.13:0,48,546	0/0:22,0:22:57.16:0,57,651	0/0:25,0:25:68.99:0,69,773	0/0:17,0:17:48.14:0,48,554	0/0:21,0:21:63.17:0,63,717	0/0:20,0:20:51.15:0,51,589	0/0:27,0:27:75.22:0,75,866	0/0:7,0:7:21.06:0,21,242	0/0:19,0:19:57.15:0,57,647	0/0:12,0:12:27.08:0,27,311	0/0:15,0:14:36.09:0,36,399	0/0:24,0:24:57.17:0,57,658	0/0:12,0:12:36.09:0,36,405	0/0:16,0:16:48.12:0,48,536	0/0:17,0:17:45.13:0,45,519	0/0:14,0:14:36.11:0,36,415	0/0:24,0:24:66.16:0,66,747	0/1:4,21:25:0.20:507,0,0	1/1:1,27:28:78.04:714,78,0	1/1:0,12:12:33.02:302,33,0
chr10	23066479	.	GA	G	3971.81	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=11.734;DP=605;FS=17.276;HRun=2;HaplotypeScore=55.4667;InbreedingCoeff=0.9998;MQ=84.99;MQ0=0;MQRankSum=-1.368;QD=36.11;ReadPosRankSum=0.980;VQSLOD=1.9579;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:36.12:0,36,539	0/0:13,0:13:39.12:0,39,563	0/0:17,0:17:48.13:0,48,644	0/0:20,0:20:53.99:0,54,733	0/0:26,0:26:78.26:0,78,1167	0/0:30,0:30:90.30:0,90,1349	0/0:15,0:15:45.12:0,45,630	1/1:1,25:26:75.24:973,75,0	0/0:26,0:26:78.25:0,78,1149	0/0:25,0:25:75.25:0,75,1113	0/0:27,0:27:78.26:0,78,1169	0/0:26,0:26:78.25:0,78,1148	0/0:20,0:20:57.19:0,57,853	0/0:27,0:27:78.24:0,78,1129	0/0:22,0:22:66.22:0,66,989	0/0:18,0:18:54.18:0,54,809	0/0:19,0:19:54.18:0,54,806	0/0:13,0:13:36.01:0,36,488	0/0:12,0:12:36.10:0,36,503	0/0:29,0:29:87.28:0,87,1283	0/0:19,0:19:51.17:0,51,764	0/0:13,0:13:39.11:0,39,546	0/0:24,0:24:69.22:0,69,1014	0/0:12,0:12:36.12:0,36,536	0/0:29,0:29:87.17:0,87,1232	1/1:1,27:28:81.26:1052,81,0	1/1:0,39:39:99:1363,105,0	1/1:0,17:17:45.15:584,45,0
chr10	23066877	.	A	ATGTGTGTG	7231.97	PASS	AB=0.705;AC=40;AF=0.714;AN=56;BaseQRankSum=-6.242;DP=542;FS=2.483;HRun=0;HaplotypeScore=149.4288;InbreedingCoeff=0.4302;MQ=59.09;MQ0=10;MQRankSum=-5.000;QD=17.22;ReadPosRankSum=-0.607;VQSLOD=4.2466;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:34:24.28:455,24,0	0/1:2,0:7:31.02:31,0,32	0/0:21,0:9:9:0,9,90	0/1:27,0:15:22.08:22,0,216	1/1:13,12:26:4.91:55,5,0	1/1:6,13:20:39.13:1288,39,0	1/1:4,10:17:6.02:131,6,0	1/1:38,0:38:40.50:360,41,0	1/1:8,8:20:12.48:343,12,0	1/1:5,7:13:26.88:708,27,0	1/1:5,5:10:2.28:31,2,0	1/1:5,7:15:17.93:453,18,0	1/1:9,10:21:21.07:846,21,0	1/1:11,15:26:15.05:584,15,0	0/0:6,0:22:1.55:0,2,501	0/0:2,0:11:15.52:0,16,279	0/1:10,0:25:59.07:59,0,130	0/0:18,0:28:10.81:0,11,383	0/0:9,0:16:2.04:0,2,67	0/1:7,0:19:22.18:22,0,142	0/0:9,0:21:23.47:0,23,179	1/1:5,0:6:6.02:114,6,0	1/1:5,2:7:12.04:213,12,0	1/1:7,7:16:2.48:91,2,0	1/1:3,15:17:23.90:732,24,0	1/1:13,0:23:34.25:316,34,0	1/1:12,0:25:35.97:306,36,0	1/1:2,0:6:8.99:74,9,0
chr10	23067495	.	GAC	G	655.92	PASS	AB=0.937;AC=20;AF=0.357;AN=56;BaseQRankSum=6.623;DP=558;FS=4.645;HRun=0;HaplotypeScore=108.4516;InbreedingCoeff=0.0334;MQ=67.62;MQ0=8;MQRankSum=0.978;QD=2.12;ReadPosRankSum=2.859;VQSLOD=1.9703;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:43:34.43:0,34,353	1/1:7,0:6:5.96:42,6,0	0/0:27,0:14:0:0,0,0	0/0:23,0:19:2.92:0,3,8	0/1:14,3:17:7.26:7,0,279	0/0:15,0:15:30.08:0,30,422	0/0:27,1:27:4.79:0,5,506	0/0:23,0:19:20.92:0,21,182	0/0:19,1:20:9.77:0,10,502	0/1:14,1:15:7.30:7,0,281	0/0:11,0:11:15.05:0,15,216	0/1:10,1:11:44.63:45,0,193	0/0:19,3:22:4.48:0,4,469	0/1:26,2:28:11.46:11,0,722	0/1:18,0:19:13.82:33,0,14	0/1:17,0:18:26.38:102,0,26	1/1:25,0:26:33.73:225,34,0	0/1:16,0:17:15.50:15,0,136	0/1:14,0:14:0.27:0,0,98	1/1:14,0:15:8.77:60,9,0	1/1:31,0:33:14.45:112,14,0	0/1:11,1:12:10.27:10,0,276	0/0:8,0:8:15.05:0,15,231	0/1:35,2:37:37.15:37,0,689	0/1:20,3:23:72.04:72,0,311	0/0:17,1:18:29.09:0,29,256	0/0:10,0:10:24.04:0,24,270	0/1:9,2:11:41.55:42,0,242
chr10	23067550	.	GCA	G	926.99	PASS	AB=0.945;AC=14;AF=0.250;AN=56;BaseQRankSum=6.158;DP=524;FS=7.128;HRun=0;HaplotypeScore=102.6659;InbreedingCoeff=0.1122;MQ=55.26;MQ0=16;MQRankSum=1.967;QD=4.08;ReadPosRankSum=-0.450;VQSLOD=1.2550;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:18,22:39:61.74:746,62,0	0/0:5,0:4:12.02:0,12,153	0/1:21,0:8:20.30:20,0,151	0/0:14,0:5:11.68:0,12,105	0/0:17,0:17:39.13:0,39,617	0/0:18,2:20:9.16:0,9,605	0/1:16,2:17:50.82:51,0,218	1/1:24,0:18:0.34:96,0,0	0/1:16,1:16:0.78:1,0,467	0/1:13,1:14:8.86:9,0,344	0/0:11,0:11:24.08:0,24,383	0/1:19,1:21:1.99:2,0,604	0/0:19,0:19:42.33:0,42,661	0/0:23,0:23:39.13:0,39,611	0/0:7,0:16:21.13:0,21,130	0/0:6,0:13:16.02:0,16,129	0/0:22,0:21:9.06:0,9,600	0/0:22,0:21:39.13:0,39,596	0/1:22,1:22:33.09:33,0,341	0/0:10,0:9:6.02:0,6,96	0/0:16,0:15:6.02:0,6,96	0/0:11,1:12:24.07:0,24,355	0/0:14,0:14:30.10:0,30,476	0/0:29,1:30:18.22:0,18,763	0/0:27,2:29:29.65:0,30,905	0/1:18,0:18:18.07:18,0,78	1/1:11,0:13:0.12:43,0,0	0/1:15,0:16:28.33:54,0,28
chr10	23067554	.	A	ACG	1996.46	PASS	AB=0.780;AC=9;AF=0.161;AN=56;BaseQRankSum=-2.066;DP=527;FS=1.678;HRun=0;HaplotypeScore=98.0841;InbreedingCoeff=0.3092;MQ=56.56;MQ0=16;MQRankSum=-0.596;QD=15.72;ReadPosRankSum=1.346;VQSLOD=3.4404;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,1:36:22.27:0,22,402	0/0:5,0:4:12.03:0,12,162	0/0:25,0:10:16.03:0,16,178	0/0:14,0:5:13.78:0,14,102	0/0:19,0:19:48.10:0,48,646	0/0:20,0:20:51.10:0,51,688	0/0:16,0:15:29.99:0,30,345	1/1:5,20:19:5.55:677,6,0	0/0:18,0:17:47.83:0,48,616	0/0:16,0:16:40.54:0,41,506	0/0:11,0:11:27.08:0,27,391	0/0:23,0:22:53.56:0,54,712	0/0:21,0:21:56.02:0,56,704	0/0:21,0:21:54.10:0,54,713	1/1:19,0:16:4.96:194,5,0	0/1:13,0:12:20.24:129,0,20	0/1:21,0:20:3.36:3,0,562	0/0:22,0:21:23.61:0,24,578	0/0:23,0:22:7.33:0,7,422	0/0:9,0:8:6.02:0,6,92	0/0:16,0:15:8.78:0,9,111	0/0:12,0:12:30.04:0,30,372	0/0:14,0:14:33.10:0,33,483	0/0:29,0:29:77.87:0,78,982	0/0:29,0:29:49.98:0,50,947	0/1:6,13:19:55.99:520,0,56	0/1:7,7:13:1.60:317,0,2	0/1:7,9:16:82.52:290,0,83
chr10	23068878	.	CA	C	2770.23	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=11.368;DP=656;FS=4.390;HRun=7;HaplotypeScore=62.5689;InbreedingCoeff=0.9966;MQ=77.06;MQ0=0;MQRankSum=-2.545;QD=25.41;ReadPosRankSum=-0.114;VQSLOD=4.2142;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:22:63.18:0,63,770	0/0:10,0:10:27.09:0,27,339	0/0:15,0:15:42.04:0,42,452	0/0:14,0:14:27.08:0,27,329	0/0:39,0:39:99:0,111,1383	0/0:37,0:37:99:0,105,1296	0/0:18,0:18:42.12:0,42,516	1/1:6,24:30:72.14:727,72,0	0/0:30,0:30:81.26:0,81,1019	0/0:29,0:29:81.22:0,81,993	0/0:24,0:24:69.19:0,69,851	0/0:26,0:26:69.18:0,69,838	0/0:35,0:35:96.29:0,96,1188	0/0:30,0:30:90.28:0,90,1119	0/0:26,0:26:72.23:0,72,902	0/0:23,0:23:63.18:0,63,769	0/0:14,0:14:36.12:0,36,453	0/0:11,0:11:27.09:0,27,340	0/0:19,0:19:51.16:0,51,641	0/0:27,0:27:78.24:0,78,970	0/0:9,0:9:18.04:0,18,212	0/0:22,0:22:63.19:0,63,781	0/0:32,0:32:90.29:0,90,1132	0/0:10,0:10:27.09:0,27,340	0/0:24,0:24:60.19:0,60,754	1/1:1,28:29:84.19:857,84,0	1/1:1,28:29:81.18:826,81,0	1/1:0,21:21:51.12:520,51,0
chr10	23069714	.	AT	A	2884.92	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=4.713;DP=653;FS=0.384;HRun=8;HaplotypeScore=74.1990;InbreedingCoeff=0.9995;MQ=76.71;MQ0=0;MQRankSum=-2.833;QD=25.09;ReadPosRankSum=1.122;VQSLOD=4.3679;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:57.17:0,57,689	1/1:0,10:10:30.05:290,30,0	0/0:23,0:23:57.04:0,57,629	0/0:15,0:16:24.67:0,25,369	0/0:26,0:26:78.24:0,78,942	0/0:20,0:20:57.17:0,57,689	0/0:13,0:13:36.11:0,36,434	0/0:45,0:45:99:0,123,1467	0/0:21,0:21:63.16:0,63,737	0/0:28,0:28:81.25:0,81,979	0/0:32,0:32:90.28:0,90,1087	0/0:17,0:17:48.13:0,48,568	0/0:23,0:23:66.20:0,66,797	0/0:23,0:23:60.18:0,60,723	0/0:28,0:28:75.22:0,75,894	0/0:23,0:23:69.21:0,69,834	1/1:1,24:25:72.10:691,72,0	1/1:1,16:17:39.06:376,39,0	1/1:0,14:14:42.04:395,42,0	1/1:3,33:36:99:945,99,0	1/1:0,13:13:39.06:377,39,0	0/0:24,0:24:66.18:0,66,784	0/0:37,0:37:99:0,108,1305	0/0:16,0:16:39.04:0,39,452	0/0:31,0:31:90.27:0,90,1077	0/0:22,0:22:66.18:0,66,769	0/0:32,0:32:90.26:0,90,1075	0/0:18,0:18:48.15:0,48,580
chr10	23070283	.	A	ATT	4287.52	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-11.128;DP=582;FS=0.000;HRun=8;HaplotypeScore=67.0177;InbreedingCoeff=0.9962;MQ=76.90;MQ0=1;MQRankSum=-1.202;QD=34.58;ReadPosRankSum=2.441;VQSLOD=4.7667;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,0:15:27.45:94,27,0	1/1:1,8:9:21.07:333,21,0	0/0:16,0:16:30.05:0,30,332	0/0:14,0:14:24.93:0,25,269	0/0:33,0:33:90.18:0,90,975	0/0:29,0:29:75.10:0,75,803	0/0:16,0:16:42.08:0,42,458	0/0:33,0:33:81.21:0,81,903	0/0:22,0:22:57.13:0,57,625	0/0:22,0:22:60.14:0,60,663	0/0:24,0:25:66.11:0,66,794	0/0:19,0:19:48.10:0,48,535	0/0:27,0:27:75.19:0,75,836	0/0:30,0:30:87.17:0,87,940	0/0:18,0:18:51.14:0,51,568	0/0:26,0:26:66.16:0,66,736	1/1:0,19:19:54.15:830,54,0	1/1:1,11:12:27.09:428,27,0	1/1:4,20:24:60.20:949,60,0	1/1:4,31:34:87.30:1366,87,0	1/1:3,7:10:18.06:286,18,0	0/0:12,0:12:33.09:0,33,368	0/0:23,0:23:63.17:0,63,702	0/0:11,0:11:33.09:0,33,368	0/0:21,0:22:62.91:0,63,681	0/0:25,0:25:63.16:0,63,702	0/0:26,0:26:75.18:0,75,826	0/0:9,0:9:21.03:0,21,223
chr10	23070908	.	CTT	C	547.92	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.549;DP=775;FS=0.000;HRun=3;HaplotypeScore=90.5871;InbreedingCoeff=0.9982;MQ=82.13;MQ0=0;MQRankSum=-2.784;QD=32.23;ReadPosRankSum=-0.019;VQSLOD=3.0849;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,17:17:42.14:643,42,0	0/0:11,0:11:33.11:0,33,636	0/0:22,0:22:60.21:0,60,1159	0/0:19,0:19:49.93:0,50,832	0/0:35,0:35:99:0,102,1956	0/0:32,0:32:96.32:0,96,1821	0/0:30,0:30:90.30:0,90,1690	0/0:35,0:35:99:0,105,1970	0/0:28,0:28:81.28:0,81,1557	0/0:41,0:41:99:0,123,2271	0/0:24,0:24:66.23:0,66,1259	0/0:27,0:27:81.26:0,81,1486	0/0:41,0:41:99:0,114,2188	0/0:43,0:43:99:0,126,2390	0/0:37,0:37:99:0,105,2009	0/0:34,0:34:96.33:0,96,1849	0/0:17,0:17:51.17:0,51,973	0/0:10,0:10:30.10:0,30,562	0/0:20,0:20:60.21:0,60,1144	0/0:25,0:25:75.26:0,75,1449	0/0:24,0:24:72.24:0,72,1360	0/0:26,0:26:78.26:0,78,1476	0/0:24,0:24:72.23:0,72,1348	0/0:32,0:32:96.33:0,96,1842	0/0:37,0:37:99:0,111,2138	0/0:35,0:35:96.32:0,96,1813	0/0:39,0:39:99:0,117,2253	0/0:10,0:10:27.08:0,27,488
chr10	23070956	.	G	GT	2160.91	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-10.255;DP=735;FS=2.237;HRun=7;HaplotypeScore=68.1176;InbreedingCoeff=0.9841;MQ=78.14;MQ0=0;MQRankSum=-3.710;QD=29.20;ReadPosRankSum=1.977;VQSLOD=4.3349;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:42.06:0,42,400	0/0:7,0:7:12:0,12,110	0/0:19,0:19:44.97:0,45,417	0/0:15,0:15:35.96:0,36,329	0/0:44,0:44:99:0,120,1151	0/0:27,0:27:75.11:0,75,724	0/0:25,0:25:60.06:0,60,566	0/0:29,0:29:63.08:0,63,608	0/0:37,0:37:99:0,102,974	0/0:35,0:35:87.08:0,87,831	0/0:24,0:24:57.08:0,57,550	0/0:24,0:24:66.09:0,66,632	0/0:38,0:38:99:0,108,1043	0/0:30,0:30:78.12:0,78,753	1/1:6,38:44:99:1341,111,0	1/1:3,27:30:78.24:941,78,0	0/0:20,0:20:54.09:0,54,521	0/0:15,0:15:36.05:0,36,348	0/0:18,0:18:51.08:0,51,493	0/0:26,0:26:66.09:0,66,631	0/0:25,0:25:66.10:0,66,637	0/0:25,0:25:63.10:0,63,608	0/0:22,0:22:57.09:0,57,550	0/0:23,0:23:63.09:0,63,602	0/0:32,0:32:69.07:0,69,655	0/0:31,0:31:84.12:0,84,807	0/0:39,0:39:99:0,114,1100	0/0:15,0:15:39.06:0,39,377
chr10	23071241	.	TA	T	2525.79	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=12.812;DP=525;FS=0.965;HRun=3;HaplotypeScore=58.0438;InbreedingCoeff=0.8672;MQ=80.20;MQ0=0;MQRankSum=-0.694;QD=29.37;ReadPosRankSum=-1.533;VQSLOD=2.4608;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:8:24.08:0,24,346	0/0:8,0:8:24.07:0,24,330	0/0:15,0:15:29.28:0,29,454	0/1:10,0:10:18.46:18,0,220	0/0:32,0:32:96.30:0,96,1344	0/0:28,0:28:84.28:0,84,1209	0/0:11,0:11:30.10:0,30,432	1/1:2,22:24:66.18:792,66,0	0/0:16,0:16:48.15:0,48,675	0/0:30,0:30:90.27:0,90,1221	0/0:26,0:26:78.26:0,78,1123	0/0:18,0:18:54.14:0,54,723	0/0:17,0:17:51.15:0,51,699	0/0:17,0:17:51.13:0,51,679	0/0:21,0:21:60.20:0,60,864	0/0:26,0:26:78.26:0,78,1123	0/0:18,0:18:51.14:0,51,695	0/0:9,0:9:24.08:0,24,345	0/0:20,0:20:60.18:0,60,815	0/0:28,0:28:78.26:0,78,1122	0/0:11,0:11:29.97:0,30,404	0/0:11,0:11:30.09:0,30,414	0/0:24,0:24:72.15:0,72,977	0/0:18,0:18:54.18:0,54,777	0/0:27,0:27:78.25:0,78,1107	1/1:1,15:16:45.12:543,45,0	1/1:0,26:26:78.25:966,78,0	1/1:0,10:10:30.09:372,30,0
chr10	23071882	.	TTG	T	542.08	PASS	AB=1.000;AC=23;AF=0.575;AN=40;BaseQRankSum=-3.308;DP=409;FS=0.000;HRun=0;HaplotypeScore=68.7881;InbreedingCoeff=0.4918;MQ=73.20;MQ0=5;MQRankSum=3.604;QD=3.15;ReadPosRankSum=2.072;VQSLOD=1.4935;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:2.58:0,3,34	./.	./.	./.	1/1:7,0:7:3.01:32,3,0	1/1:25,2:27:8.41:74,8,0	1/1:11,3:15:4.96:73,5,0	0/0:31,0:29:3.01:0,3,38	1/1:12,1:13:3.01:32,3,0	./.	1/1:4,1:5:3.01:32,3,0	0/1:14,0:14:18.19:18,0,37	1/1:11,2:13:6.02:64,6,0	1/1:18,2:19:11.99:111,12,0	0/0:27,0:27:38.91:0,39,312	0/0:25,0:25:32.92:0,33,262	0/0:17,0:17:1.25:0,1,3	1/1:4,0:5:2.84:14,3,0	./.	./.	1/1:21,0:23:2.84:14,3,0	./.	./.	1/1:14,7:21:15.03:155,15,0	1/1:6,3:9:6.02:64,6,0	0/0:17,0:15:9.03:0,9,127	0/0:24,0:23:14.97:0,15,175	0/0:6,0:6:3.01:0,3,44
chr10	23071894	.	G	GTT	1074.81	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.133;DP=418;FS=0.000;HRun=1;HaplotypeScore=68.5563;InbreedingCoeff=0.8393;MQ=58.00;MQ0=9;MQRankSum=-5.026;QD=23.88;ReadPosRankSum=5.614;VQSLOD=1.9246;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:3.68:0,4,61	0/0:4,0:4:5.99:0,6,48	0/0:19,0:12:30.03:0,30,303	0/0:15,0:12:32.92:0,33,289	0/0:9,0:9:26.94:0,27,216	0/0:25,0:26:50.48:0,50,393	0/0:15,0:15:27.87:0,28,216	0/0:25,0:23:59.88:0,60,519	0/0:12,0:12:26.75:0,27,201	0/0:9,0:9:23.73:0,24,184	0/0:8,0:8:14.97:0,15,120	0/0:15,0:14:32.38:0,32,250	0/0:15,0:14:38.81:0,39,295	0/0:18,0:17:38.64:0,39,303	1/1:8,13:21:37.05:681,37,0	1/1:14,10:24:25.79:514,26,0	0/0:16,0:15:38.34:0,38,280	0/0:5,0:5:14.92:0,15,112	0/0:12,0:12:35.97:0,36,305	0/0:8,0:7:17.95:0,18,142	0/0:29,0:28:50.84:0,51,401	0/0:10,0:10:17.87:0,18,136	0/0:7,0:7:19.99:0,20,149	0/0:26,0:26:56.86:0,57,463	0/0:10,0:10:20.97:0,21,174	0/0:19,0:17:47.56:0,48,365	0/0:21,0:20:31.63:0,32,407	0/0:6,0:6:11.91:0,12,107
chr10	23071914	.	G	GTT	1304.29	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=4.973;DP=410;FS=0.706;HRun=1;HaplotypeScore=65.8636;InbreedingCoeff=0.8494;MQ=55.17;MQ0=16;MQRankSum=-2.977;QD=25.08;ReadPosRankSum=3.277;VQSLOD=2.3556;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:5.16:0,5,106	0/0:4,0:4:8.96:0,9,69	0/0:17,0:8:20.96:0,21,203	0/0:27,0:18:33.94:0,34,399	0/0:11,0:11:26.93:0,27,214	0/0:24,0:24:47.88:0,48,385	0/0:12,0:13:28.48:0,28,200	0/0:22,0:20:59.77:0,60,498	0/0:8,0:8:17.96:0,18,144	0/0:6,0:6:16.98:0,17,128	0/0:7,0:7:11.98:0,12,96	0/0:11,0:10:23.79:0,24,179	0/0:18,0:16:41.76:0,42,321	0/0:17,0:16:35.65:0,36,277	1/1:14,12:26:62.98:771,63,0	1/1:16,10:26:41.25:654,41,0	0/0:16,0:15:27.73:0,28,204	0/0:3,0:3:8.96:0,9,69	0/0:6,0:5:15:0,15,132	0/0:9,0:8:20.93:0,21,164	0/0:25,0:24:47.86:0,48,379	0/0:13,0:13:26.78:0,27,203	0/0:6,0:6:17.96:0,18,144	0/0:25,0:25:50.85:0,51,410	0/0:10,0:10:20.97:0,21,173	0/0:19,0:17:47.76:0,48,378	0/0:15,0:14:40.21:0,40,378	0/0:8,0:8:23.84:0,24,194
chr10	23072077	.	CTG	C	1026.77	PASS	AB=0.825;AC=32;AF=0.667;AN=48;BaseQRankSum=-0.196;DP=274;FS=7.380;HRun=0;HaplotypeScore=64.7257;InbreedingCoeff=0.5281;MQ=58.77;MQ0=13;MQRankSum=-1.073;QD=5.90;ReadPosRankSum=-1.435;VQSLOD=0.9392;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:6:5.01:0,5,27	./.	0/0:31,0:11:5.67:0,6,34	0/0:16,0:6:3.43:0,3,19	0/1:6,7:12:15.34:15,0,18	1/1:7,0:7:11.98:98,12,0	1/1:5,0:4:2.99:24,3,0	1/1:38,0:36:49.76:314,50,0	1/1:5,0:5:3:25,3,0	1/1:8,2:8:5.96:44,6,0	1/1:7,0:7:5.99:49,6,0	1/1:5,0:5:5.99:49,6,0	1/1:7,0:7:11.98:98,12,0	1/1:9,0:9:8.99:73,9,0	0/0:7,0:6:5.97:0,6,45	0/0:8,0:8:11.95:0,12,93	0/0:11,0:11:14.35:0,14,86	0/1:5,0:4:11.58:12,0,15	1/1:2,0:2:2.92:17,3,0	./.	0/0:10,0:10:11.88:0,12,81	./.	1/1:7,0:7:8.96:69,9,0	1/1:8,0:7:8.98:72,9,0	./.	1/1:12,0:12:11.73:76,12,0	1/1:22,0:23:12.50:66,12,0	1/1:11,0:11:13.97:90,14,0
chr10	23072095	.	GTGTGTA	G	1821.21	PASS	AB=1.000;AC=14;AF=0.280;AN=50;BaseQRankSum=2.318;DP=200;FS=54.927;HRun=0;HaplotypeScore=67.1061;InbreedingCoeff=0.4115;MQ=48.77;MQ0=12;MQRankSum=-4.597;QD=19.58;ReadPosRankSum=2.829;VQSLOD=0.7106;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:6:5.90:0,6,41	./.	0/0:11,0:3:6.01:0,6,72	0/0:10,0:3:3.48:0,3,40	0/0:9,0:8:3.90:0,4,49	0/0:5,0:5:2.06:0,2,21	0/0:5,0:4:3.43:0,3,20	1/1:8,32:37:96.59:1116,97,0	1/1:3,0:3:0.47:1,0,0	0/0:4,0:2:2:0,2,7	0/0:3,0:3:2.56:0,3,23	0/0:3,0:3:2.76:0,3,20	0/0:6,0:6:5.33:0,5,45	1/1:6,0:6:0.69:1,1,0	0/0:7,0:6:6.02:0,6,93	0/0:5,0:5:15.02:0,15,210	0/0:12,0:12:14.04:0,14,177	0/1:4,0:3:18.49:27,0,18	0/0:3,0:3:1.63:0,2,22	./.	0/0:6,0:6:11.98:0,12,98	./.	0/0:3,0:3:1.12:0,1,3	0/0:7,0:6:8.73:0,9,67	0/1:4,0:4:2.11:2,0,19	1/1:4,4:8:12.43:211,12,0	1/1:3,14:17:15.05:294,15,0	1/1:3,8:11:14.18:309,14,0
chr10	23072102	.	T	TAC	156.71	PASS	AC=12;AF=0.273;AN=44;BaseQRankSum=-2.651;DP=145;FS=4.314;HRun=0;HaplotypeScore=58.8381;InbreedingCoeff=0.4827;MQ=49.80;MQ0=10;MQRankSum=-0.212;QD=4.90;ReadPosRankSum=0.186;VQSLOD=1.4294;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:5:3:0,3,25	./.	0/0:3,0:1:3:0,3,25	./.	1/1:7,0:6:2.96:19,3,0	./.	./.	0/0:39,0:36:99:0,99,881	0/0:2,0:2:3:0,3,25	1/1:4,0:2:2.62:18,3,0	0/0:2,0:2:3:0,3,25	0/0:1,0:1:3:0,3,25	0/0:3,0:3:5.99:0,6,50	0/0:3,0:3:3:0,3,25	0/0:6,0:5:2.80:0,3,13	0/0:3,0:3:8.79:0,9,63	1/1:10,1:11:10.48:89,10,0	1/1:3,0:3:5.87:40,6,0	1/1:1,3:4:11.60:99,12,0	./.	1/1:3,0:3:2.86:25,3,0	./.	0/0:1,0:1:3:0,3,25	0/0:4,0:3:5.99:0,6,49	0/0:3,0:3:3.01:0,3,35	0/0:7,0:7:14.85:0,15,111	0/0:15,0:15:14.65:0,15,89	0/0:10,0:10:14.79:0,15,97
chr10	23072140	.	T	TATATATACAC	253.99	PASS	AB=0.900;AC=6;AF=0.214;AN=28;BaseQRankSum=-0.029;DP=121;FS=10.607;HRun=0;HaplotypeScore=70.3513;InbreedingCoeff=0.1047;MQ=56.08;MQ0=11;MQRankSum=-2.696;QD=5.40;ReadPosRankSum=-0.496;VQSLOD=-0.0299;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:13,0:4:0.44:0,0,13	0/1:24,0:3:0.91:1,0,10	./.	./.	./.	0/0:30,0:30:63.22:0,63,1155	./.	./.	./.	0/0:1,0:1:3.01:0,3,51	0/0:1,0:1:3.01:0,3,49	0/0:2,0:2:6.02:0,6,99	0/0:1,0:1:3.01:0,3,49	./.	0/1:4,5:11:9.71:162,0,10	1/1:3,0:3:9.03:129,9,0	0/1:3,0:3:3.80:53,0,4	./.	./.	./.	./.	./.	0/0:1,0:1:3.01:0,3,87	0/0:9,0:9:21.04:0,21,313	0/0:10,0:10:10.37:0,10,328	0/1:5,0:5:3.24:3,0,114
chr10	23073152	.	G	GTTT	2372.14	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=10.268;DP=547;FS=1.257;HRun=0;HaplotypeScore=105.6827;InbreedingCoeff=0.9716;MQ=87.86;MQ0=0;MQRankSum=-9.772;QD=53.91;ReadPosRankSum=1.580;VQSLOD=5.7974;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,132,2414	1/1:0,4:4:12.04:257,12,0	0/0:22,0:22:66.21:0,66,1147	0/0:21,0:21:57.14:0,57,978	0/0:26,0:26:78.27:0,78,1454	0/0:34,0:34:99:0,102,1902	0/0:19,0:19:54.19:0,54,997	0/0:29,0:29:84.28:0,84,1515	0/0:17,0:17:51.17:0,51,943	0/0:29,0:29:87.29:0,87,1565	0/0:17,0:17:48.16:0,48,895	0/0:18,0:18:54.19:0,54,1004	0/0:31,0:31:87.30:0,87,1614	0/0:22,0:22:63.22:0,63,1175	0/0:24,0:24:66.23:0,66,1221	0/0:15,0:15:42.14:0,42,775	1/1:1,4:5:15.05:313,15,0	1/1:0,8:8:24.08:532,24,0	1/1:4,7:11:28.40:495,28,0	1/1:2,10:12:36.12:764,36,0	1/1:1,3:4:9.03:193,9,0	0/0:12,0:12:36.12:0,36,671	0/0:16,0:16:48.16:0,48,895	0/0:29,0:29:81.23:0,81,1444	0/0:22,0:22:66.21:0,66,1191	0/0:29,0:29:87.30:0,87,1607	0/0:21,0:21:60.21:0,60,1119	0/0:4,0:4:12.04:0,12,224
chr10	23073154	.	A	ATGTT	2602.68	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=10.530;DP=541;FS=0.000;HRun=0;HaplotypeScore=115.4359;InbreedingCoeff=0.9716;MQ=88.85;MQ0=0;MQRankSum=-9.494;QD=61.97;ReadPosRankSum=2.289;VQSLOD=5.5273;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,135,2723	1/1:0,4:4:12.04:290,12,0	0/0:22,0:22:63.06:0,63,1133	0/0:22,0:22:66.10:0,66,1143	0/0:27,0:27:78.26:0,78,1599	0/0:35,0:35:99:0,105,2161	0/0:18,0:18:54.14:0,54,1077	0/0:26,0:26:78.26:0,78,1599	0/0:16,0:16:48.16:0,48,1004	0/0:29,0:29:84.29:0,84,1748	0/0:17,0:17:51.18:0,51,1058	0/0:18,0:18:54.19:0,54,1119	0/0:29,0:29:87.30:0,87,1780	0/0:22,0:22:66.23:0,66,1371	0/0:23,0:23:69.19:0,69,1350	0/0:14,0:14:42.07:0,42,777	1/1:1,4:5:15.01:308,15,0	1/1:0,8:8:24.08:599,24,0	1/1:3,7:10:30.09:630,30,0	1/1:1,10:11:32.70:740,33,0	1/1:1,3:4:9.03:216,9,0	0/0:12,0:12:36.12:0,36,755	0/0:16,0:16:48.16:0,48,1004	0/0:30,0:30:84.26:0,84,1655	0/0:21,0:21:63.22:0,63,1321	0/0:31,0:31:90.19:0,90,1728	0/0:21,0:21:63.22:0,63,1304	0/0:4,0:4:12.04:0,12,252
chr10	23073243	.	AAG	A	89.45	PASS	AB=0.971;AC=13;AF=0.232;AN=56;BaseQRankSum=-1.948;DP=423;FS=33.167;HRun=0;HaplotypeScore=94.2844;InbreedingCoeff=-0.1266;MQ=67.55;MQ0=2;MQRankSum=2.880;QD=0.48;ReadPosRankSum=2.947;VQSLOD=0.0971;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:66.34:0,66,353	0/0:6,0:6:10.73:0,11,49	0/1:22,0:13:26.62:27,0,157	0/1:17,0:9:4.63:5,0,77	0/1:15,0:16:4.84:5,0,75	0/1:16,1:17:10.60:11,0,76	1/1:7,0:7:8.25:32,8,0	0/0:10,0:10:7.15:0,7,99	0/1:15,1:16:33.50:33,0,57	0/1:16,0:16:12.93:13,0,93	0/0:11,1:12:12.07:0,12,129	0/0:11,0:11:9.23:0,9,123	0/1:17,0:17:19.82:20,0,96	0/0:15,0:15:13.03:0,13,216	0/0:27,0:27:55.39:0,55,270	0/0:18,0:18:40.17:0,40,176	0/0:14,0:14:27.10:0,27,109	0/0:24,0:24:54.54:0,55,239	0/0:13,0:13:19.35:0,19,143	0/0:15,0:15:38.26:0,38,191	0/0:11,0:11:15.80:0,16,78	0/1:14,0:14:1.61:2,0,86	0/1:6,2:8:36.82:42,0,37	0/0:14,0:14:0.91:0,1,128	0/0:10,0:10:22.01:0,22,198	0/1:16,0:16:33.13:33,0,100	0/1:19,0:19:11.68:12,0,116	0/0:6,0:6:4.42:0,4,60
chr10	23073251	.	GGGGGGA	G	1837.74	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-0.148;DP=471;FS=0.694;HRun=0;HaplotypeScore=125.7805;InbreedingCoeff=0.9520;MQ=71.33;MQ0=2;MQRankSum=-7.702;QD=42.74;ReadPosRankSum=2.866;VQSLOD=3.7603;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:47.02:0,47,161	0/0:7,0:7:10.39:0,10,50	0/0:25,0:15:38.22:0,38,615	0/0:21,0:13:26.92:0,27,681	0/0:22,0:22:58.47:0,58,1071	0/0:24,0:24:59.96:0,60,1018	0/0:14,0:14:38.71:0,39,725	0/0:12,0:12:22.31:0,22,331	0/0:21,0:21:57.14:0,57,1088	0/0:18,0:18:24.96:0,25,754	0/0:13,0:13:19.80:0,20,351	0/0:12,0:12:30.10:0,30,608	0/0:31,0:31:81.27:0,81,1631	0/0:14,0:14:36.58:0,37,678	1/1:5,23:28:54.16:1085,54,0	1/1:1,14:15:41.73:874,42,0	0/0:15,0:15:25.20:0,25,105	0/0:22,0:22:40.74:0,41,126	0/0:12,0:12:28.61:0,29,158	0/0:14,0:14:28.69:0,29,137	0/0:12,0:12:16.18:0,16,82	0/0:14,0:14:30.10:0,30,530	0/0:13,0:13:27.06:0,27,457	0/0:18,0:18:33.07:0,33,469	0/0:6,0:6:17.94:0,18,275	0/0:15,0:15:39.13:0,39,625	0/0:21,0:21:51.05:0,51,820	0/0:5,0:5:15.05:0,15,268
chr10	23073520	.	TGAG	T	2126.83	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-6.572;DP=621;FS=10.229;HRun=0;HaplotypeScore=139.7457;InbreedingCoeff=0.9763;MQ=85.53;MQ0=0;MQRankSum=-2.057;QD=43.40;ReadPosRankSum=-1.262;VQSLOD=4.2557;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,132,1913	0/0:7,0:7:21.05:0,21,300	0/0:24,0:24:63.22:0,63,1436	0/0:21,0:21:63.22:0,63,1396	0/0:20,0:20:13.21:0,13,720	0/0:22,0:22:39.22:0,39,873	0/0:27,0:27:51.75:0,52,1029	0/0:16,0:16:16.18:0,16,538	0/0:23,0:23:44.27:0,44,943	0/0:23,0:23:66.21:0,66,895	0/0:22,0:22:45.22:0,45,892	0/0:13,0:13:39.13:0,39,582	0/0:30,0:30:48.32:0,48,1278	0/0:21,0:21:59:0,59,882	1/1:0,23:23:66.23:1124,66,0	1/1:1,25:26:66.23:1124,66,0	0/0:33,0:33:99:0,99,1464	0/0:16,0:16:42.14:0,42,603	0/0:24,0:24:65.39:0,65,905	0/0:22,0:22:60.19:0,60,883	0/0:31,0:31:90.30:0,90,1322	0/0:17,0:17:26.15:0,26,647	0/0:18,0:18:48.15:0,48,696	0/0:24,0:24:69.23:0,69,1029	0/0:28,0:28:35.28:0,35,1034	0/0:19,0:19:30.07:0,30,714	0/0:19,0:19:29.66:0,30,736	0/0:7,0:7:21.07:0,21,338
chr10	23073577	.	A	AGT	2405.04	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-4.515;DP=661;FS=4.389;HRun=0;HaplotypeScore=98.7841;InbreedingCoeff=0.9683;MQ=82.74;MQ0=0;MQRankSum=-4.441;QD=43.73;ReadPosRankSum=1.868;VQSLOD=5.3729;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,52:55:99:2500,141,0	0/0:8,0:8:24.08:0,24,330	0/0:17,0:17:45.15:0,45,612	0/0:19,0:19:45.04:0,45,587	0/0:31,0:31:90.26:0,90,1186	0/0:19,0:19:48.13:0,48,626	0/0:24,0:24:69.17:0,69,895	0/0:22,0:22:66.21:0,66,892	0/0:20,0:20:54.14:0,54,706	0/0:25,0:25:72.23:0,72,977	0/0:22,0:22:66.22:0,66,905	0/0:16,0:16:45.13:0,45,586	0/0:29,0:29:81.19:0,81,1056	0/0:18,0:18:54.17:0,54,725	0/0:30,0:29:78.26:0,78,1071	0/0:20,0:20:60.20:0,60,823	0/0:38,0:38:99:0,111,1523	0/0:20,0:20:57.14:0,57,746	0/0:24,0:24:69.21:0,69,906	0/0:21,0:21:63.21:0,63,865	0/0:39,0:39:99:0,114,1544	0/0:16,0:16:45.15:0,45,618	0/0:15,0:15:45.13:0,45,600	0/0:33,0:33:96.32:0,96,1314	0/0:28,0:28:81.27:0,81,1113	0/0:23,0:23:62.79:0,63,852	0/0:24,0:24:72.21:0,72,953	0/0:5,0:5:12.04:0,12,165
chr10	23074060	.	TTCTCTCTCTC	T	3016.69	PASS	AB=0.868;AC=26;AF=0.464;AN=56;BaseQRankSum=-0.307;DP=668;FS=11.830;HRun=0;HaplotypeScore=235.5715;InbreedingCoeff=0.4578;MQ=64.77;MQ0=8;MQRankSum=1.989;QD=8.50;ReadPosRankSum=4.280;VQSLOD=1.2268;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:27:28.39:28,0,54	0/0:9,0:9:3.01:0,3,63	0/0:41,0:19:3.01:0,3,32	0/0:37,0:18:6.47:0,6,91	0/1:11,8:21:18.95:40,0,19	1/1:12,5:20:12.07:416,12,0	1/1:11,3:14:8.88:62,9,0	0/0:49,0:48:33.34:0,33,470	1/1:8,12:20:12:250,12,0	1/1:13,6:22:26.31:843,26,0	0/1:20,5:26:4.51:5,0,21	1/1:15,9:25:16.55:462,17,0	1/1:15,7:22:12.63:459,13,0	1/1:9,4:15:6.87:49,7,0	0/0:24,0:21:14.74:0,15,130	0/1:29,0:29:3.40:3,0,254	0/0:18,0:20:25.34:0,25,573	0/0:11,0:12:24.30:0,24,460	0/0:25,0:25:30.44:0,30,695	0/0:26,0:26:13.29:0,13,222	0/0:13,0:13:3.01:0,3,142	1/1:11,2:14:15.03:210,15,0	1/1:14,9:23:14.86:235,15,0	0/1:18,4:21:78.79:79,0,81	1/1:19,3:25:7.23:50,7,0	0/1:26,0:27:17.91:18,0,1419	0/0:28,0:34:48.11:0,48,1323	0/0:23,0:23:6.02:0,6,97
chr10	23074088	.	C	CTG	255.78	PASS	AB=0.984;AC=10;AF=0.179;AN=56;BaseQRankSum=0.707;DP=708;FS=16.698;HRun=0;HaplotypeScore=190.2064;InbreedingCoeff=-0.0068;MQ=42.35;MQ0=30;MQRankSum=2.617;QD=1.18;ReadPosRankSum=1.374;VQSLOD=1.8615;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:32.79:0,33,306	0/0:6,0:6:6:0,6,58	0/0:57,0:13:28.18:0,28,236	0/0:76,0:16:16.44:0,16,173	0/1:32,0:32:19.01:19,0,150	0/1:27,0:27:61.37:61,0,197	0/0:17,0:17:9.64:0,10,65	0/0:32,0:31:78.84:0,79,578	0/0:22,1:23:16.31:0,16,135	0/1:22,1:22:17.99:18,0,317	0/1:20,0:20:4.64:5,0,110	0/1:24,0:24:9.11:9,0,117	0/0:29,0:29:25.75:0,26,296	0/0:26,0:26:41.79:0,42,325	1/1:23,0:20:8.20:132,8,0	0/1:27,0:25:26.23:105,0,26	0/0:24,0:24:24.09:0,24,315	0/0:12,0:12:31.48:0,31,245	0/0:18,0:18:48.26:0,48,385	0/0:22,0:21:19.24:0,19,168	0/0:11,0:9:6:0,6,66	0/1:10,1:11:40.21:40,0,52	0/0:19,0:19:6.16:0,6,80	0/0:24,0:24:32.53:0,33,240	0/0:22,1:23:20.27:0,20,182	0/0:28,0:27:45.06:0,45,447	0/1:29,0:28:3.72:4,0,178	0/0:13,0:12:10.34:0,10,67
chr10	23074106	.	CTGTA	C	183.28	PASS	AB=0.991;AC=12;AF=0.214;AN=56;BaseQRankSum=1.445;DP=711;FS=11.502;HRun=0;HaplotypeScore=221.1138;InbreedingCoeff=0.0907;MQ=45.62;MQ0=31;MQRankSum=-2.726;QD=0.95;ReadPosRankSum=-1.133;VQSLOD=1.5086;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:38.76:0,39,971	1/1:5,0:5:1.82:5,2,0	0/0:70,0:16:45.10:0,45,902	0/0:78,1:24:17.51:0,18,667	0/0:38,0:38:45.15:0,45,1148	0/0:23,0:23:31.35:0,31,744	0/0:14,0:14:6.02:0,6,165	0/0:32,0:32:75.50:0,75,1554	0/0:20,0:20:17:0,17,378	0/1:25,2:26:75.65:76,0,1050	0/0:20,0:20:18.06:0,18,471	0/0:24,0:24:1.01:0,1,603	0/1:23,0:23:3.64:4,0,766	0/0:27,0:27:45.15:0,45,1096	0/1:20,0:17:0:0,0,0	1/1:21,0:19:3.48:51,3,0	0/0:21,0:21:27.83:0,28,429	0/0:16,1:17:25.20:0,25,267	0/1:14,0:14:39.78:40,0,378	0/1:24,0:23:20.40:20,0,236	0/1:16,0:13:5.28:5,0,72	0/0:12,0:12:14.92:0,15,323	0/1:21,0:21:5.36:5,0,212	0/0:26,0:26:36.12:0,36,878	0/0:26,1:27:45.15:0,45,1070	0/1:22,0:22:99:105,0,535	0/0:25,0:24:31.77:0,32,554	0/0:10,0:9:5.50:0,6,45
chr10	23074108	.	GTA	G	121.51	PASS	AB=0.983;AC=11;AF=0.196;AN=56;BaseQRankSum=1.792;DP=707;FS=29.329;HRun=0;HaplotypeScore=207.6148;InbreedingCoeff=0.1683;MQ=45.62;MQ0=32;MQRankSum=-1.667;QD=0.75;ReadPosRankSum=-0.450;VQSLOD=1.2693;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:36.03:0,36,694	1/1:5,0:5:3.01:39,3,0	0/0:68,0:16:43.33:0,43,624	0/0:81,0:24:35.11:0,35,537	0/0:38,0:38:45.15:0,45,827	0/0:25,0:25:31.90:0,32,530	0/0:14,0:14:6.02:0,6,115	0/0:32,0:32:86.51:0,87,1444	0/0:18,0:18:18.73:0,19,309	0/0:26,0:25:28.76:0,29,861	0/0:20,0:20:18.06:0,18,343	0/0:25,0:25:16.80:0,17,493	0/0:23,0:23:33.99:0,34,615	0/0:28,0:28:47.93:0,48,809	0/1:19,0:16:0:0,0,0	1/1:20,0:18:3.46:25,3,0	0/0:22,0:22:31.86:0,32,403	0/1:16,0:16:43.65:44,0,205	0/0:16,0:16:7.87:0,8,356	0/1:21,1:21:28.02:28,0,215	0/1:16,0:13:9.76:10,0,37	0/0:11,0:11:15.05:0,15,260	0/1:20,0:20:0.18:0,0,159	0/0:26,0:26:36.12:0,36,638	0/0:26,1:27:45.15:0,45,791	0/1:20,0:20:34.20:34,0,454	0/1:23,2:24:72.07:72,0,232	0/0:10,0:9:4.56:0,5,45
chr10	23074116	.	GTCTC	G	1646.63	PASS	AB=0.749;AC=9;AF=0.167;AN=54;BaseQRankSum=-3.940;DP=725;FS=2.828;HRun=0;HaplotypeScore=228.8270;InbreedingCoeff=0.3746;MQ=47.10;MQ0=27;MQRankSum=1.686;QD=10.90;ReadPosRankSum=0.406;VQSLOD=3.2911;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:35,0:35:1.95:2,0,41	./.	0/0:63,0:17:38.41:0,38,639	0/0:74,0:27:38.95:0,39,700	0/0:45,0:45:48.16:0,48,625	0/0:23,0:23:24.08:0,24,414	0/0:17,0:17:9.03:0,9,120	0/0:38,0:38:94.93:0,95,1242	0/0:17,0:17:12.02:0,12,142	0/0:25,0:25:13.39:0,13,726	0/0:22,0:22:21.07:0,21,296	0/0:26,0:26:37.36:0,37,503	0/0:24,0:24:19.38:0,19,485	0/0:27,0:27:48.15:0,48,628	0/1:22,0:19:0:0,0,0	0/0:22,0:20:3.48:0,3,50	1/1:5,16:20:33.95:556,34,0	0/1:5,11:16:25.25:335,0,25	0/1:4,12:15:42.32:471,0,42	1/1:6,17:22:17.83:323,18,0	0/1:5,13:15:22.06:99,0,22	0/0:13,0:13:15.05:0,15,198	0/0:21,0:21:8.56:0,9,119	0/0:26,0:26:36.12:0,36,477	0/0:29,0:29:45.14:0,45,594	0/0:22,0:22:6.93:0,7,448	0/0:24,0:24:31.70:0,32,375	0/0:4,0:9:9.02:0,9,101
chr10	23074126	.	CTG	C	4479.81	PASS	AB=0.912;AC=30;AF=0.577;AN=52;BaseQRankSum=-2.203;DP=726;FS=13.278;HRun=0;HaplotypeScore=208.8074;InbreedingCoeff=0.6467;MQ=48.75;MQ0=19;MQRankSum=5.620;QD=10.72;ReadPosRankSum=5.966;VQSLOD=3.1164;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,0:36:17.27:151,17,0	./.	0/0:45,0:14:12:0,12,129	0/0:65,0:24:26.27:0,26,310	1/1:15,27:44:50.99:583,51,0	0/1:10,10:22:1.47:182,0,1	1/1:8,8:16:8.86:107,9,0	0/0:51,0:49:11.26:0,11,287	1/1:7,5:13:11.87:121,12,0	1/1:9,18:27:56.26:567,56,0	1/1:8,14:22:15.04:178,15,0	1/1:6,20:26:32.96:356,33,0	1/1:13,12:25:3.10:376,3,0	1/1:7,20:27:44.82:513,45,0	0/0:23,0:21:2.76:0,3,24	0/0:22,0:20:8.78:0,9,57	0/0:23,0:22:24.04:0,24,92	0/0:18,0:18:25.87:0,26,118	0/1:17,0:16:3.36:3,0,130	0/0:21,0:20:14.72:0,15,55	0/1:21,0:18:6.78:7,0,48	1/1:4,12:16:15.05:178,15,0	1/1:10,14:25:9.03:107,9,0	1/1:9,18:27:36.06:410,36,0	1/1:10,17:30:59.90:621,60,0	0/0:3,1:28:11.23:0,11,289	0/1:8,0:23:22.19:22,0,40	./.
chr10	23074166	.	ATGTGTCTG	A	129.32	PASS	AB=1.000;AC=5;AF=0.093;AN=54;BaseQRankSum=3.433;DP=719;FS=0.000;HRun=0;HaplotypeScore=223.9387;InbreedingCoeff=0.6825;MQ=53.80;MQ0=22;MQRankSum=-2.377;QD=2.16;ReadPosRankSum=2.766;VQSLOD=2.5958;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:60.04:0,60,1996	0/0:8,0:8:21.07:0,21,795	0/0:52,0:19:36.59:0,37,1177	0/0:60,0:21:44.61:0,45,1376	0/0:33,0:33:66.23:0,66,2449	0/0:19,0:19:33.11:0,33,1145	0/0:14,0:14:30.10:0,30,1087	0/0:49,0:48:72.24:0,72,2540	0/0:12,0:12:21.07:0,21,760	0/0:26,0:25:57.20:0,57,2211	0/0:19,0:19:45.15:0,45,1692	0/0:25,0:25:52.06:0,52,2086	0/0:19,0:19:36.12:0,36,1277	0/0:22,0:21:33.11:0,33,1250	1/1:11,8:19:3.40:15,3,0	1/1:11,14:25:14.87:211,15,0	0/0:26,0:26:54.18:0,54,2007	0/1:16,0:16:13.85:14,0,804	0/0:20,0:16:27.09:0,27,823	0/0:23,0:22:35.97:0,36,1400	0/0:27,0:26:48.16:0,48,1837	0/0:23,0:23:48.16:0,48,1862	0/0:17,0:17:17.25:0,17,641	0/0:32,0:32:60.14:0,60,2200	0/0:32,0:32:66.14:0,66,2502	0/0:38,0:38:93.32:0,93,3614	0/0:20,0:20:24.08:0,24,1005	./.
chr10	23074170	.	GTC	G	133.62	PASS	AB=1.000;AC=6;AF=0.111;AN=54;BaseQRankSum=5.927;DP=717;FS=0.000;HRun=0;HaplotypeScore=157.7761;InbreedingCoeff=0.5872;MQ=55.13;MQ0=20;MQRankSum=-3.499;QD=1.74;ReadPosRankSum=0.246;VQSLOD=2.4461;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:61.73:0,62,1073	0/0:8,0:8:24.07:0,24,430	0/0:55,0:21:55.78:0,56,981	0/0:63,0:25:59.28:0,59,997	0/0:35,0:35:81.17:0,81,1420	0/0:18,0:18:45.13:0,45,793	0/0:16,0:16:39.09:0,39,654	0/0:45,0:44:99:0,126,2105	0/0:12,1:13:33.08:0,33,569	0/0:25,0:24:72.19:0,72,1319	0/0:18,0:18:45.15:0,45,866	0/0:25,0:25:51.17:0,51,984	0/0:19,0:19:44.70:0,45,792	0/0:21,0:20:48.13:0,48,863	1/1:13,5:18:2.68:40,3,0	1/1:18,7:25:15.05:195,15,0	0/0:26,0:26:66.12:0,66,1140	0/1:15,0:15:2.76:3,0,560	0/0:21,0:17:48.06:0,48,696	0/0:22,0:21:44.78:0,45,834	0/0:26,0:25:48.16:0,48,924	0/0:23,0:23:51.16:0,51,947	0/0:16,0:16:20.61:0,21,369	0/0:32,0:32:65.77:0,66,1198	0/0:33,0:33:90.20:0,90,1608	0/0:39,0:39:70.93:0,71,1812	0/1:19,0:19:8.70:9,0,432	./.
chr10	23076532	.	G	GA	1001.88	PASS	AB=0.857;AC=5;AF=0.089;AN=56;BaseQRankSum=-9.308;DP=633;FS=2.116;HRun=9;HaplotypeScore=56.0258;InbreedingCoeff=0.7736;MQ=64.77;MQ0=3;MQRankSum=-2.414;QD=17.89;ReadPosRankSum=0.958;VQSLOD=3.8153;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:71.96:0,72,619	0/1:10,2:12:36.37:36,0,178	0/0:18,0:14:32.92:0,33,273	0/0:19,0:11:23.13:0,23,228	0/0:39,0:39:99:0,104,892	0/0:15,0:15:44.94:0,45,381	0/0:17,0:17:47.97:0,48,413	0/0:35,1:36:56.74:0,57,717	0/0:16,0:16:15.41:0,15,285	0/0:25,0:25:65.98:0,66,573	0/0:27,0:27:74.98:0,75,651	0/0:18,0:18:44.99:0,45,390	0/0:26,0:26:56.97:0,57,494	0/0:26,0:26:77.91:0,78,661	1/1:5,22:27:60.16:664,60,0	1/1:0,17:17:39.11:431,39,0	0/0:20,0:20:47.96:0,48,417	0/0:17,0:17:44.99:0,45,391	0/0:13,0:13:32.99:0,33,286	0/0:28,0:28:71.93:0,72,617	0/0:13,0:13:38.98:0,39,334	0/0:22,0:22:59.98:0,60,521	0/0:30,0:30:77.95:0,78,677	0/0:8,0:8:24:0,24,208	0/0:32,0:32:92.98:0,93,807	0/0:23,0:23:53.96:0,54,466	0/0:37,0:38:99:0,101,861	0/0:22,0:22:56.96:0,57,491
chr10	23077909	.	CA	C	2674.04	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=10.396;DP=549;FS=0.831;HRun=9;HaplotypeScore=58.2226;InbreedingCoeff=0.9510;MQ=73.52;MQ0=0;MQRankSum=0.101;QD=22.28;ReadPosRankSum=0.787;VQSLOD=4.3766;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:27.08:0,27,312	1/1:2,11:13:33.02:302,33,0	0/0:17,0:17:28.72:0,29,294	0/0:7,0:5:0.79:0,1,53	0/0:29,0:29:75.22:0,75,866	0/0:24,0:24:66.17:0,66,744	0/0:15,0:15:33.08:0,33,370	0/0:29,0:29:69.14:0,69,742	0/0:21,0:21:57.16:0,57,647	0/0:26,0:26:69.18:0,69,778	0/0:32,0:32:78.18:0,78,877	0/0:19,0:19:51.14:0,51,578	0/0:22,0:22:60.16:0,60,681	0/0:15,0:15:30.09:0,30,346	0/0:10,0:13:29.83:0,30,199	0/0:9,0:12:31.88:0,32,194	1/1:3,21:24:60.03:549,60,0	1/1:1,19:20:54.03:494,54,0	1/1:2,18:20:54.02:489,54,0	1/1:4,31:35:92.95:834,93,0	1/1:0,8:8:21.01:192,21,0	0/0:19,1:20:23.68:0,24,518	0/0:20,0:20:54.15:0,54,615	0/0:13,0:13:36.11:0,36,416	0/0:18,0:18:54.16:0,54,622	0/0:28,0:28:69.18:0,69,779	0/0:22,1:23:35.72:0,36,665	0/0:16,0:16:36.08:0,36,403
chr10	23077921	.	CA	C	568.15	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.733;DP=530;FS=0.838;HRun=3;HaplotypeScore=65.2623;InbreedingCoeff=0.9959;MQ=71.95;MQ0=0;MQRankSum=-1.119;QD=24.70;ReadPosRankSum=0.501;VQSLOD=2.7474;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:27.07:0,27,353	0/0:13,0:13:39.13:0,39,547	0/0:15,1:15:37.17:0,37,433	0/0:11,0:9:23.54:0,24,224	0/0:30,0:30:90.28:0,90,1260	0/0:23,0:23:69.23:0,69,994	0/0:10,0:10:27.09:0,27,389	0/0:24,0:24:72.23:0,72,1018	0/0:19,0:19:48.16:0,48,691	0/0:28,0:28:81.26:0,81,1131	0/0:28,0:28:84.28:0,84,1208	0/0:18,0:18:54.18:0,54,777	0/0:19,0:19:54.18:0,54,778	0/0:13,0:13:39.13:0,39,561	1/1:7,2:9:24.02:244,24,0	1/1:11,3:14:39.03:445,39,0	0/0:25,0:25:69.23:0,69,958	0/0:21,0:21:57.17:0,57,723	0/0:24,0:24:63.21:0,63,895	0/0:31,0:31:84.27:0,84,1156	0/0:10,0:10:27.09:0,27,380	0/0:18,0:18:54.18:0,54,775	0/0:18,0:18:54.18:0,54,778	0/0:14,0:14:39.13:0,39,559	0/0:21,0:21:63.21:0,63,907	0/0:23,0:23:63.18:0,63,871	0/0:24,0:24:69.23:0,69,987	0/0:16,0:16:33.07:0,33,452
chr10	23079574	.	A	AT	932	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=10.271;DP=618;FS=8.257;HRun=4;HaplotypeScore=68.7509;InbreedingCoeff=0.9971;MQ=77.42;MQ0=0;MQRankSum=-9.986;QD=20.71;ReadPosRankSum=1.222;VQSLOD=2.5103;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:78.26:0,78,1091	0/0:7,0:7:21.07:0,21,293	0/0:14,0:14:42.12:0,42,555	0/0:13,0:13:36.09:0,36,469	0/0:32,0:32:96.30:0,96,1310	0/0:28,0:28:84.27:0,84,1159	0/0:21,0:21:60.20:0,60,839	0/0:24,0:24:72.23:0,72,993	0/0:15,0:15:45.15:0,45,625	0/0:18,0:18:54.18:0,54,754	0/0:24,0:24:69.16:0,69,947	0/0:21,0:21:63.21:0,63,881	0/0:28,0:28:81.27:0,81,1132	0/0:27,0:27:81.27:0,81,1130	1/1:0,22:26:66.48:692,66,0	1/1:0,11:19:37.09:362,37,0	0/0:23,0:23:69.22:0,69,945	0/0:36,0:36:99:0,108,1437	0/0:11,0:11:33.11:0,33,459	0/0:41,0:41:99:0,123,1700	0/0:15,0:15:45.15:0,45,629	0/0:17,0:17:51.17:0,51,710	0/0:17,0:17:51.17:0,51,710	0/0:9,0:9:27.09:0,27,378	0/0:29,0:29:81.27:0,81,1129	0/0:34,0:34:99:0,102,1424	0/0:24,0:24:72.18:0,72,964	0/0:18,0:18:51.16:0,51,698
chr10	23079575	.	A	ATCCTT	2993.12	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=10.536;DP=623;FS=11.178;HRun=0;HaplotypeScore=116.2009;InbreedingCoeff=0.9969;MQ=77.79;MQ0=0;MQRankSum=-10.559;QD=59.86;ReadPosRankSum=-0.107;VQSLOD=4.1470;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:78.24:0,78,1731	0/0:7,0:7:21.07:0,21,461	0/0:14,0:14:39.13:0,39,851	0/0:14,0:14:33.09:0,33,714	0/0:30,0:30:90.31:0,90,2004	0/0:28,0:28:84.29:0,84,1856	0/0:21,0:21:63.20:0,63,1362	0/0:23,0:23:69.24:0,69,1537	0/0:15,0:15:42.14:0,42,929	0/0:18,0:18:54.19:0,54,1176	0/0:24,0:24:69.17:0,69,1523	0/0:21,0:21:63.22:0,63,1388	0/0:30,0:30:81.28:0,81,1798	0/0:27,0:27:81.28:0,81,1804	1/1:6,21:28:76.99:1951,77,0	1/1:11,11:22:52.27:1164,52,0	0/0:23,0:23:66.23:0,66,1452	0/0:35,0:35:99:0,102,2241	0/0:11,0:11:30.10:0,30,669	0/0:41,0:41:99:0,117,2552	0/0:15,0:15:45.14:0,45,954	0/0:17,0:17:48.16:0,48,1056	0/0:18,0:18:51.17:0,51,1135	0/0:9,0:9:27.09:0,27,600	0/0:29,0:29:87.27:0,87,1840	0/0:34,0:34:99:0,99,2159	0/0:24,0:24:69.24:0,69,1493	0/0:18,0:18:51.15:0,51,1090
chr10	23081189	.	CA	C	9987.28	PASS	AB=0.785;AC=36;AF=0.643;AN=56;BaseQRankSum=14.376;DP=951;FS=20.702;HRun=8;HaplotypeScore=85.8182;InbreedingCoeff=0.1059;MQ=68.19;MQ0=104;MQRankSum=-3.513;QD=12.56;ReadPosRankSum=0.821;VQSLOD=2.7501;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:25,17:40:99:268,0,724	1/1:0,15:14:36.06:348,36,0	0/1:18,4:21:28.85:29,0,458	0/1:20,2:20:14.57:15,0,347	0/1:34,9:40:68.42:68,0,946	0/0:33,8:35:64.30:0,64,1048	0/1:16,6:18:3.77:4,0,514	1/1:8,33:38:90.08:856,90,0	0/0:18,11:19:22.18:0,22,551	0/1:32,11:41:99:172,0,933	0/1:33,6:37:10.55:11,0,990	0/0:30,12:31:61.32:0,61,1022	0/0:38,6:38:96.29:0,96,1150	0/1:17,9:21:99:120,0,374	1/1:5,39:30:78.12:753,78,0	1/1:3,31:26:26.86:543,27,0	1/1:4,29:30:69.10:666,69,0	1/1:3,28:28:75.12:724,75,0	1/1:4,22:25:63.09:608,63,0	1/1:3,46:44:92.98:1180,93,0	1/1:4,26:30:63.09:608,63,0	0/1:20,12:31:99:202,0,586	0/1:20,12:31:99:234,0,532	0/1:18,10:27:99:163,0,474	0/1:25,14:35:99:161,0,760	1/1:5,39:38:65.91:920,66,0	1/1:2,36:33:90.14:869,90,0	1/1:0,20:20:48.08:463,48,0
chr10	23082753	.	ATG	A	14149.65	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-0.707;DP=937;FS=1.178;HRun=0;HaplotypeScore=136.2296;InbreedingCoeff=0.9704;MQ=61.17;MQ0=10;MQRankSum=1.178;QD=26.95;ReadPosRankSum=5.506;VQSLOD=5.8051;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,26:32:53.49:701,53,0	0/0:17,0:17:48.16:0,48,817	0/0:19,0:4:2.19:0,2,90	0/0:19,0:11:21.07:0,21,324	1/1:3,35:38:78.25:1014,78,0	1/1:3,32:34:60.20:780,60,0	1/1:7,27:34:72.23:937,72,0	0/0:50,0:50:99:0,141,2375	1/1:4,39:42:98.35:1255,98,0	1/1:7,40:46:99:1464,114,0	1/1:3,36:39:84.27:1093,84,0	1/1:2,36:38:81.26:1054,81,0	1/1:2,53:54:99:1756,135,0	1/1:7,40:47:93.30:1209,93,0	0/0:30,0:30:84.29:0,84,1407	0/0:54,0:54:99:0,147,2470	0/0:23,0:23:60.21:0,60,1015	0/0:12,0:12:15.05:0,15,244	0/0:23,0:22:51.16:0,51,815	0/0:52,0:52:99:0,144,2441	0/0:34,0:34:96.33:0,96,1624	1/1:1,29:28:69.22:898,69,0	1/1:3,27:28:51.06:663,51,0	1/1:3,23:26:54.17:702,54,0	1/1:5,25:30:48.16:624,48,0	0/0:35,1:36:57.30:0,57,1530	0/0:28,0:28:72.25:0,72,1213	0/0:15,0:15:42.13:0,42,675
chr10	23083138	.	CT	C	10125.65	PASS	AB=1.000;AC=41;AF=0.732;AN=56;BaseQRankSum=10.035;DP=668;FS=15.237;HRun=10;HaplotypeScore=68.7038;InbreedingCoeff=0.9197;MQ=76.75;MQ0=0;MQRankSum=-0.644;QD=20.46;ReadPosRankSum=3.783;VQSLOD=4.4153;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,27:30:80.98:703,81,0	1/1:2,11:13:32.98:287,33,0	0/0:13,1:15:6.64:0,7,261	0/1:23,0:23:3.48:3,0,320	1/1:2,39:42:99:917,107,0	1/1:1,19:20:26.81:462,27,0	1/1:5,11:17:29.02:240,29,0	0/0:29,0:29:66.18:0,66,730	1/1:2,17:19:47.99:417,48,0	1/1:5,25:30:74.98:651,75,0	1/1:2,31:33:80.96:703,81,0	1/1:2,21:23:56.98:495,57,0	1/1:3,26:29:68.98:599,69,0	1/1:2,26:28:68.98:599,69,0	0/0:22,1:23:34.11:0,34,604	0/0:23,1:24:43.13:0,43,704	1/1:2,26:28:74.98:651,75,0	1/1:1,8:9:23.99:208,24,0	1/1:2,15:18:47.02:397,47,0	1/1:2,40:42:99:1016,117,0	1/1:2,9:11:26.99:234,27,0	1/1:3,16:19:41.97:365,42,0	1/1:2,20:23:55.92:475,56,0	1/1:2,9:11:20.99:182,21,0	1/1:4,23:27:59.98:521,60,0	0/0:20,1:21:34.10:0,34,604	0/0:46,2:48:80.02:0,80,1288	0/0:12,0:12:33.09:0,33,365
chr10	23083872	.	CTG	C	6453.51	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=14.686;DP=602;FS=1.583;HRun=0;HaplotypeScore=73.3261;InbreedingCoeff=0.9972;MQ=82.47;MQ0=0;MQRankSum=-3.771;QD=45.13;ReadPosRankSum=3.253;VQSLOD=6.5989;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:69.24:0,69,1402	1/1:0,7:7:21.07:342,21,0	0/0:19,0:19:57.20:0,57,1143	0/0:16,0:16:48.16:0,48,936	0/0:36,0:36:99:0,108,2179	0/0:27,0:27:81.28:0,81,1646	0/0:21,0:21:63.22:0,63,1254	0/0:35,0:35:99:0,102,2031	0/0:15,0:15:45.15:0,45,899	0/0:33,0:33:99:0,99,1989	0/0:21,0:21:63.20:0,63,1234	0/0:24,0:24:72.25:0,72,1421	0/0:22,0:22:66.23:0,66,1330	0/0:16,0:16:48.16:0,48,973	1/1:0,25:25:63.22:1026,63,0	1/1:0,32:32:81.28:1320,81,0	1/1:0,11:11:33.11:538,33,0	1/1:0,6:6:18.06:293,18,0	1/1:0,20:20:57.16:880,57,0	1/1:0,28:28:84.29:1369,84,0	1/1:0,14:14:42.14:685,42,0	0/0:23,0:23:69.24:0,69,1382	0/0:29,0:29:87.30:0,87,1753	0/0:13,0:13:39.12:0,39,755	0/0:26,0:26:78.27:0,78,1575	0/0:24,0:24:72.24:0,72,1404	0/0:28,0:28:81.25:0,81,1595	0/0:7,0:7:21.07:0,21,427
chr10	23084060	.	TAGTAA	T	5098.13	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=11.407;DP=651;FS=0.905;HRun=0;HaplotypeScore=123.6001;InbreedingCoeff=0.9633;MQ=89.70;MQ0=0;MQRankSum=-3.407;QD=47.20;ReadPosRankSum=4.080;VQSLOD=4.9429;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:96.33:0,96,2916	1/1:2,9:11:24.08:497,24,0	0/0:27,0:27:75.26:0,75,2167	0/0:29,0:29:78.22:0,78,2058	0/0:36,0:36:99:0,105,3209	0/0:33,0:33:90.31:0,90,2766	0/0:27,0:27:75.23:0,75,2125	0/0:33,0:33:96.32:0,96,2774	0/0:22,0:22:66.23:0,66,2022	0/0:22,0:22:57.20:0,57,1753	0/0:21,0:21:63.22:0,63,1893	0/0:17,0:17:51.18:0,51,1541	0/0:34,0:34:99:0,99,2905	0/0:19,0:19:57.20:0,57,1710	0/0:24,0:24:72.25:0,72,2173	0/0:25,0:25:69.22:0,69,2010	1/1:1,23:24:57.20:1182,57,0	1/1:0,2:2:3.01:62,3,0	1/1:5,13:18:39.11:808,39,0	1/1:1,33:34:84.29:1741,84,0	1/1:3,16:19:39.13:808,39,0	0/0:18,0:18:54.19:0,54,1660	0/0:17,0:17:48.11:0,48,1338	0/0:15,0:15:45.14:0,45,1305	0/0:28,0:27:81.26:0,81,2374	0/0:19,0:19:57.20:0,57,1692	0/0:32,0:32:96.26:0,96,2737	0/0:10,0:10:30.10:0,30,922
chr10	23085127	.	GAT	G	1575.20	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-6.816;DP=594;FS=0.000;HRun=0;HaplotypeScore=111.5447;InbreedingCoeff=0.9945;MQ=76.65;MQ0=0;MQRankSum=-3.884;QD=37.50;ReadPosRankSum=2.991;VQSLOD=5.2081;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:26.81:0,27,194	0/0:10,0:10:29.85:0,30,220	0/0:14,0:14:38.93:0,39,505	0/0:20,0:20:48.04:0,48,763	0/0:28,0:28:82.91:0,83,615	0/0:27,0:27:68.58:0,69,498	0/0:27,0:27:74.65:0,75,592	0/0:39,0:39:99:0,108,835	0/0:16,0:16:41.74:0,42,301	0/0:27,0:27:80.42:0,80,603	0/0:27,0:27:77.35:0,77,585	0/0:22,0:22:53.69:0,54,388	0/0:27,0:27:65.60:0,66,477	0/0:29,0:29:77.46:0,77,560	1/1:0,20:20:51.17:823,51,0	1/1:0,22:22:54.18:874,54,0	0/0:14,0:14:35.73:0,36,254	0/0:10,0:10:17.84:0,18,151	0/0:21,0:21:62.70:0,63,474	0/0:27,0:27:80.44:0,80,586	0/0:16,0:16:38.78:0,39,285	0/0:16,0:16:45.16:0,45,322	0/0:15,0:15:38.58:0,39,275	0/0:13,0:13:35.72:0,36,256	0/0:22,0:22:62.62:0,63,454	0/0:30,0:30:86.42:0,86,642	0/0:28,0:28:71.46:0,71,513	0/0:17,0:17:41.74:0,42,307
chr10	23085128	.	AT	A	10896.81	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-2.119;DP=591;FS=4.352;HRun=10;HaplotypeScore=66.7016;InbreedingCoeff=0.9839;MQ=76.01;MQ0=0;MQRankSum=-6.475;QD=19.56;ReadPosRankSum=4.430;VQSLOD=5.7214;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,9:10:23.99:208,24,0	1/1:2,8:10:23.99:208,24,0	0/0:13,0:13:18.04:0,18,188	0/0:21,0:20:35.15:0,35,391	1/1:6,22:28:65.93:567,66,0	1/1:1,26:27:65.99:573,66,0	1/1:4,21:25:26.81:462,27,0	1/1:6,32:39:94.97:804,95,0	1/1:1,15:16:41.99:365,42,0	1/1:2,25:27:74.76:625,75,0	1/1:3,24:27:62.91:540,63,0	1/1:1,21:22:53.99:469,54,0	1/1:2,24:26:56.98:495,57,0	1/1:3,26:29:68.98:599,69,0	1/1:21,0:21:16.36:92,16,0	1/1:22,0:22:39.96:124,40,0	1/1:2,12:14:32.99:286,33,0	1/1:2,7:10:20.03:162,20,0	1/1:5,16:21:47.94:406,48,0	1/1:1,25:26:74.88:636,75,0	1/1:2,14:16:32.99:287,33,0	1/1:1,15:16:41.51:364,42,0	1/1:1,14:15:35.99:313,36,0	1/1:0,13:13:35.99:313,36,0	1/1:1,21:22:59.99:521,60,0	1/1:4,26:30:74.96:648,75,0	1/1:4,24:28:59.98:521,60,0	1/1:2,15:17:35.99:313,36,0
chr10	23086061	.	A	AG	25367.60	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-6.648;DP=723;FS=2.606;HRun=3;HaplotypeScore=76.9762;InbreedingCoeff=0.9792;MQ=78.18;MQ0=0;MQRankSum=-8.623;QD=36.66;ReadPosRankSum=5.730;VQSLOD=5.0962;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,26:28:78.26:1092,78,0	1/1:2,6:8:18.06:250,18,0	0/0:17,0:17:38.87:0,39,413	0/0:14,0:14:35.77:0,36,364	1/1:4,29:33:81.27:1133,81,0	1/1:0,31:31:84.28:1176,84,0	1/1:1,24:25:63.21:881,63,0	1/1:8,30:38:93.26:1277,93,0	1/1:5,18:23:57.17:778,57,0	1/1:3,34:37:99:1390,102,0	1/1:1,21:22:63.21:880,63,0	1/1:0,26:26:72.20:986,72,0	1/1:3,33:36:87.29:1217,87,0	1/1:1,23:24:60.20:840,60,0	1/1:5,28:33:84.26:1157,84,0	1/1:2,24:26:66.22:924,66,0	1/1:2,30:32:84.28:1176,84,0	1/1:0,10:10:24.08:336,24,0	1/1:0,24:24:72.23:989,72,0	1/1:3,27:30:84.28:1166,84,0	1/1:1,28:29:81.27:1133,81,0	1/1:1,25:26:69.23:966,69,0	1/1:2,37:39:99:1468,105,0	1/1:0,20:20:60.20:840,60,0	1/1:2,20:22:48.16:672,48,0	1/1:4,28:32:84.28:1174,84,0	1/1:2,32:34:93.31:1297,93,0	1/1:0,4:4:12.04:168,12,0
chr10	23086288	.	GT	G	1762.35	PASS	AB=0.895;AC=13;AF=0.232;AN=56;BaseQRankSum=6.362;DP=589;FS=14.530;HRun=10;HaplotypeScore=63.6938;InbreedingCoeff=0.8289;MQ=70.08;MQ0=0;MQRankSum=-0.957;QD=14.33;ReadPosRankSum=2.448;VQSLOD=2.2694;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:75.19:0,75,818	1/1:2,3:5:2.98:26,3,0	0/1:15,2:11:17.04:17,0,47	0/0:11,0:10:17.80:0,18,159	0/0:33,0:33:84.21:0,84,911	0/0:34,0:34:79.87:0,80,1005	0/0:12,0:12:33.09:0,33,365	0/0:5,0:26:57.46:0,57,292	0/0:10,1:11:4.03:0,4,273	0/0:24,0:24:57.15:0,57,630	0/0:24,0:26:56.42:0,56,560	0/0:22,0:23:60:0,60,645	0/0:22,0:23:62.99:0,63,669	0/0:23,0:23:69.19:0,69,763	0/0:20,1:21:37.11:0,37,630	0/0:21,0:21:63.17:0,63,697	1/1:3,29:32:74.97:651,75,0	1/1:3,7:10:17.99:156,18,0	1/1:5,13:18:39.46:340,39,0	1/1:4,26:30:65.93:573,66,0	1/1:2,9:11:20.99:182,21,0	0/0:16,0:16:48.12:0,48,524	0/0:28,0:28:81.17:0,81,863	0/0:19,0:20:59.95:0,60,631	0/0:24,0:26:72.02:0,72,771	0/0:7,0:24:60.31:0,60,366	0/0:2,0:29:65.59:0,66,338	0/0:3,0:7:11.36:0,11,57
chr10	23086504	.	TA	T	1008.33	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=3.625;DP=663;FS=20.809;HRun=8;HaplotypeScore=71.3326;InbreedingCoeff=0.9951;MQ=71.71;MQ0=1;MQRankSum=0.076;QD=21.01;ReadPosRankSum=2.337;VQSLOD=2.3399;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:66.15:0,66,777	0/0:7,0:7:17.84:0,18,128	0/0:21,0:17:29.61:0,30,328	0/0:24,0:23:36.03:0,36,404	0/0:36,0:36:97.17:0,97,1152	0/0:20,0:20:51.15:0,51,606	0/0:22,0:22:51.14:0,51,605	0/0:38,0:38:99:0,108,1275	0/0:19,0:19:48.14:0,48,565	0/0:22,0:22:60.18:0,60,715	0/0:18,0:18:48.15:0,48,578	0/0:18,0:18:51.16:0,51,616	0/0:36,0:36:99:0,99,1184	0/0:19,0:19:57.17:0,57,678	1/1:1,19:20:48.08:464,48,0	1/1:4,24:28:69.10:666,69,0	0/0:25,0:25:74.36:0,74,535	0/0:27,0:27:77.38:0,77,573	0/0:26,0:26:70.45:0,70,423	0/0:30,0:30:86.13:0,86,598	0/0:15,0:15:44.53:0,45,303	0/0:21,0:21:60.18:0,60,725	0/0:20,0:20:51.16:0,51,613	0/0:30,1:31:59.21:0,59,953	0/0:23,0:23:66.20:0,66,797	0/0:32,0:32:93.29:0,93,1123	0/0:25,0:25:75.23:0,75,906	0/0:13,0:13:33.10:0,33,398
chr10	23088725	.	GA	G	1556.39	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.520;DP=638;FS=1.270;HRun=1;HaplotypeScore=59.4154;InbreedingCoeff=0.9703;MQ=86.48;MQ0=0;MQRankSum=-1.660;QD=36.20;ReadPosRankSum=1.806;VQSLOD=3.8448;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:72.23:0,72,1117	0/0:14,0:14:42.13:0,42,646	0/0:24,0:24:66.21:0,66,1013	0/0:18,0:18:51.15:0,51,770	0/0:32,0:32:93.30:0,93,1461	0/0:26,0:26:75.24:0,75,1172	0/0:14,0:14:42.11:0,42,621	0/0:34,0:34:99:0,99,1560	0/0:15,0:15:45.15:0,45,716	0/0:31,0:31:87.25:0,87,1333	0/0:26,0:26:78.27:0,78,1241	0/0:22,0:22:66.21:0,66,1031	0/0:28,0:28:84.22:0,84,1264	0/0:24,0:24:72.25:0,72,1147	1/1:0,23:23:63.21:881,63,0	1/1:0,20:20:57.19:797,57,0	0/0:29,0:29:87.30:0,87,1375	0/0:9,0:9:27.09:0,27,431	0/0:22,0:22:60.20:0,60,925	0/0:32,0:32:96.28:0,96,1459	0/0:18,0:18:54.15:0,54,809	0/0:27,0:27:81.28:0,81,1291	0/0:22,0:22:66.20:0,66,1025	0/0:14,0:14:42.14:0,42,671	0/0:29,0:29:87.29:0,87,1369	0/0:22,0:22:66.22:0,66,1026	0/0:34,0:34:99:0,102,1575	0/0:3,0:3:9.03:0,9,144
chr10	23089129	.	T	TAC	1147.64	PASS	AB=0.883;AC=6;AF=0.107;AN=56;BaseQRankSum=4.461;DP=666;FS=24.145;HRun=0;HaplotypeScore=213.5844;InbreedingCoeff=-0.1198;MQ=61.92;MQ0=1;MQRankSum=0.236;QD=7.70;ReadPosRankSum=-0.721;VQSLOD=1.8539;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:17,4:21:99:189,0,103	0/0:14,0:14:12.37:0,12,129	0/0:29,0:21:47.80:0,48,784	0/0:14,0:13:30.08:0,30,434	0/0:37,0:37:51.77:0,52,727	0/0:24,0:24:20.89:0,21,321	0/0:16,0:15:28.91:0,29,392	0/1:43,0:43:99:111,0,254	0/0:28,0:28:53.67:0,54,587	0/0:32,0:32:77.79:0,78,655	0/0:28,0:28:44.40:0,44,526	0/0:26,0:26:46.56:0,47,517	0/0:30,0:30:74.35:0,74,753	0/0:29,0:29:54.55:0,55,622	0/0:23,0:23:30.52:0,31,376	0/0:21,0:21:25.84:0,26,349	0/0:14,0:15:24.06:0,24,336	0/0:8,0:8:20.56:0,21,285	0/0:21,0:21:16.71:0,17,623	0/0:22,0:22:22.29:0,22,278	0/1:11,0:11:8.53:9,0,94	0/0:17,0:17:35.26:0,35,347	0/0:27,0:27:61.49:0,61,679	0/0:22,0:22:23.46:0,23,394	0/0:34,0:34:73.47:0,73,877	0/1:22,7:29:99:368,0,100	0/1:24,12:36:99:487,0,137	0/1:8,1:8:44.06:106,0,44
chr10	23089131	.	T	TATACATACATACATAC	12906.93	PASS	AB=0.865;AC=48;AF=0.857;AN=56;BaseQRankSum=-5.662;DP=705;FS=0.800;HRun=0;HaplotypeScore=340.8429;InbreedingCoeff=0.2369;MQ=58.31;MQ0=3;MQRankSum=-0.839;QD=19.38;ReadPosRankSum=-2.436;VQSLOD=2.4002;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:24:0.81:205,1,0	1/1:14,0:14:18.03:796,18,0	0/0:26,0:18:5.99:0,6,50	0/0:13,0:12:5.98:0,6,50	1/1:38,0:38:12.38:471,12,0	1/1:25,0:25:20.84:476,21,0	1/1:18,0:17:24.42:292,24,0	1/1:39,0:37:56.63:500,57,0	1/1:27,0:27:32.98:615,33,0	1/1:31,0:31:78.04:1888,78,0	1/1:28,0:28:35.95:599,36,0	1/1:25,0:25:30.37:500,30,0	1/1:30,0:30:41.20:844,41,0	1/1:30,0:30:39.35:691,39,0	1/1:9,14:37:3.01:227,3,0	1/1:10,13:31:6.02:455,6,0	1/1:15,0:15:5.96:45,6,0	1/1:9,0:9:8.98:134,9,0	1/1:23,0:23:38.30:1037,38,0	1/1:7,14:34:3.01:225,3,0	1/1:11,0:11:11.71:153,12,0	1/1:15,0:16:23.98:449,24,0	1/1:29,0:29:39.44:712,39,0	0/1:22,0:22:71.80:239,0,72	1/1:32,0:33:33.45:556,33,0	0/1:22,0:29:36.69:362,0,37	0/1:25,0:37:37.72:365,0,38	0/1:8,0:8:0.53:72,0,1
chr10	23089157	.	T	TAC	2028.18	PASS	AB=0.942;AC=22;AF=0.393;AN=56;BaseQRankSum=7.810;DP=698;FS=5.388;HRun=0;HaplotypeScore=218.8307;InbreedingCoeff=-0.4717;MQ=50.50;MQ0=7;MQRankSum=0.651;QD=3.58;ReadPosRankSum=4.338;VQSLOD=2.3242;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:30:46.90:47,0,516	0/0:14,0:14:11.98:0,12,117	0/0:15,0:9:19.31:0,19,270	0/0:13,0:6:12.04:0,12,182	0/1:27,4:31:60.70:61,0,122	0/1:28,1:29:63.59:64,0,132	0/1:18,0:17:47.02:47,0,85	0/1:42,0:40:53.25:53,0,1061	0/1:26,3:29:99:187,0,103	0/1:27,6:33:99:333,0,141	0/1:24,4:28:46.28:162,0,46	0/1:23,2:25:53.14:53,0,120	0/1:27,5:32:99:103,0,282	0/1:27,4:31:73.66:74,0,148	0/1:29,0:28:5.27:5,0,124	0/1:26,0:26:2.07:2,0,373	0/1:12,0:12:6.96:7,0,187	0/0:11,0:11:27.72:0,28,308	0/0:30,0:28:51.74:0,52,780	0/0:33,0:32:7.24:0,7,299	0/0:16,0:16:24.30:0,24,331	0/1:14,1:15:14.36:41,0,14	0/1:23,4:27:99:151,0,112	0/1:23,3:26:48.80:49,0,134	1/1:20,3:23:16.18:197,16,0	0/1:34,1:35:99:190,0,694	0/1:36,0:36:99:246,0,391	0/1:9,0:7:64.74:119,0,65
chr10	23089159	.	T	TATATACATAC	7923.80	PASS	AB=0.956;AC=27;AF=0.482;AN=56;BaseQRankSum=2.417;DP=706;FS=2.986;HRun=0;HaplotypeScore=283.5963;InbreedingCoeff=0.3651;MQ=50.62;MQ0=6;MQRankSum=-1.630;QD=16.51;ReadPosRankSum=4.559;VQSLOD=3.3546;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:74.41:0,74,1075	0/0:13,0:13:11.39:0,11,159	0/0:17,0:11:26.10:0,26,312	0/0:14,0:7:12.03:0,12,139	0/1:27,4:31:3.30:431,0,3	1/1:29,1:30:5.97:398,6,0	1/1:19,0:18:4.97:156,5,0	0/0:42,0:40:79.77:0,80,1813	1/1:25,3:28:20.77:670,21,0	1/1:27,6:33:58.43:1322,58,0	1/1:24,4:28:18.56:569,19,0	0/1:22,2:24:11.30:402,0,11	1/1:29,5:34:40.60:1061,41,0	1/1:28,4:32:11.31:790,11,0	0/1:31,0:30:62.94:63,0,278	0/1:26,0:26:99:138,0,512	0/0:12,0:12:14.83:0,15,349	0/0:11,0:11:30.04:0,30,452	0/0:30,0:28:59.74:0,60,1020	0/1:31,0:30:65.21:65,0,424	0/0:17,0:17:32.71:0,33,490	0/1:14,1:15:12.84:207,0,13	1/1:21,4:25:33.19:914,33,0	1/1:23,3:26:13.54:244,14,0	0/1:20,3:23:1.45:402,0,1	0/1:35,1:36:43.74:44,0,1553	0/0:37,0:37:53.98:0,54,1151	0/1:8,0:7:46.63:47,0,69
chr10	23091545	.	TACAC	T	383.54	PASS	AC=12;AF=0.300;AN=40;BaseQRankSum=3.500;DP=402;FS=15.392;HRun=0;HaplotypeScore=98.4287;InbreedingCoeff=0.5883;MQ=69.36;MQ0=10;MQRankSum=-0.393;QD=6.73;ReadPosRankSum=1.079;VQSLOD=1.3572;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:5.05:0,5,39	0/0:10,0:10:2.99:0,3,24	./.	./.	./.	1/1:9,4:14:9.03:139,9,0	0/0:9,0:12:0:0,0,0	0/0:19,0:19:13.22:0,13,126	./.	1/1:9,2:11:9.02:120,9,0	./.	./.	1/1:11,1:15:3.01:46,3,0	0/0:9,0:9:0.47:0,0,1	1/1:0,0:1:3.01:44,3,0	1/1:8,0:9:12.45:119,12,0	0/0:21,0:19:15.94:0,16,261	0/0:21,0:21:18.06:0,18,335	0/0:25,0:24:18.51:0,19,224	0/0:14,0:20:3:0,3,25	0/0:20,0:18:3.01:0,3,63	1/1:4,1:5:3.01:46,3,0	./.	0/0:16,0:15:0:0,0,0	./.	0/0:17,0:17:9.03:0,9,151	0/0:14,0:14:13.97:0,14,194	0/0:3,0:3:9.03:0,9,199
chr10	23091594	.	A	ATG	1119.05	PASS	AB=0.882;AC=29;AF=0.537;AN=54;BaseQRankSum=-0.183;DP=448;FS=27.821;HRun=0;HaplotypeScore=121.4198;InbreedingCoeff=0.3223;MQ=50.56;MQ0=19;MQRankSum=0.462;QD=3.62;ReadPosRankSum=-0.434;VQSLOD=0.9095;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:23:30.08:0,30,363	0/0:0,6:7:0:0,0,0	1/1:1,0:2:0.47:1,0,0	0/0:7,0:5:8.61:0,9,57	1/1:19,0:18:2.99:23,3,0	0/1:14,0:14:0.53:1,0,34	1/1:22,0:21:2.34:11,2,0	0/0:20,0:20:50.94:0,51,432	0/1:8,0:8:0.97:1,0,2	0/0:22,0:20:5.81:0,6,108	1/1:12,0:10:0.94:1,1,0	1/1:9,0:8:2.22:7,2,0	1/1:16,0:16:4.74:30,5,0	1/1:21,0:19:4.70:28,5,0	0/1:11,0:11:0.67:24,0,1	0/1:12,0:12:22.87:23,0,23	0/1:15,21:32:16.79:137,0,17	0/1:9,14:23:14.28:14,0,74	1/1:6,15:20:4.91:398,5,0	1/1:17,0:16:9.02:115,9,0	1/1:33,0:30:9.05:423,9,0	0/0:14,0:14:2.37:0,2,8	./.	0/1:13,0:11:6.33:6,0,10	1/1:18,0:17:4.80:28,5,0	0/0:17,0:16:41.36:0,41,404	0/0:18,0:18:41.54:0,42,417	0/0:3,0:3:8.98:0,9,94
chr10	23091608	.	G	GCGCGCGCA	2861.18	PASS	AB=0.922;AC=30;AF=0.536;AN=56;BaseQRankSum=0.153;DP=447;FS=0.000;HRun=0;HaplotypeScore=154.9430;InbreedingCoeff=0.4964;MQ=63.75;MQ0=4;MQRankSum=-1.463;QD=9.44;ReadPosRankSum=-0.129;VQSLOD=2.4482;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:14:28.19:0,28,698	0/0:8,0:8:2.99:0,3,24	0/0:4,0:4:0.89:0,1,2	0/1:11,0:10:11.60:12,0,27	1/1:19,0:19:9:95,9,0	1/1:8,9:19:10.95:63,11,0	0/1:12,19:33:0.01:0,0,0	0/0:18,0:18:50.95:0,51,712	1/1:4,0:4:3.01:90,3,0	1/1:21,0:20:56.85:1116,57,0	1/1:11,0:11:8.03:71,8,0	1/1:10,0:10:12:164,12,0	1/1:14,0:14:24.05:480,24,0	1/1:20,0:20:20.38:259,20,0	0/1:14,0:14:35.40:35,0,85	0/1:13,0:12:43.32:99,0,43	0/1:33,0:31:32.44:32,0,115	0/1:22,0:22:12.49:12,0,54	0/0:19,0:18:24.79:0,25,495	0/0:15,0:14:20.90:0,21,225	0/0:33,0:32:56.85:0,57,650	1/1:18,0:18:23.40:213,23,0	1/1:8,0:11:8.59:71,9,0	1/1:11,0:12:8.02:54,8,0	1/1:16,0:16:12.01:187,12,0	0/0:13,0:13:38.93:0,39,685	0/0:15,0:15:40.20:0,40,694	0/0:4,0:4:11.93:0,12,153
chr10	23092326	.	T	TA	8297.24	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-16.728;DP=582;FS=0.000;HRun=7;HaplotypeScore=51.5834;InbreedingCoeff=0.9978;MQ=78.78;MQ0=0;MQRankSum=-0.966;QD=31.79;ReadPosRankSum=-1.058;VQSLOD=4.3981;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:39.03:0,39,369	1/1:0,16:16:48.15:580,48,0	0/0:13,0:13:27.02:0,27,254	0/0:13,0:13:20.87:0,21,211	0/0:30,0:30:90.15:0,90,869	0/0:25,0:25:69.11:0,69,666	0/0:13,0:13:36.05:0,36,348	1/1:5,39:44:99:1401,117,0	0/0:14,0:14:39.05:0,39,371	0/0:27,0:27:78.13:0,78,753	0/0:26,0:26:75.11:0,75,719	0/0:21,0:21:60.10:0,60,579	0/0:26,0:26:69.11:0,69,666	0/0:20,0:20:57.05:0,57,537	1/1:0,21:21:63.19:761,63,0	1/1:0,21:21:63.19:761,63,0	1/1:5,10:15:33.08:384,33,0	1/1:2,12:14:36.11:435,36,0	1/1:2,18:20:54.17:652,54,0	1/1:3,32:35:96.20:1119,96,0	1/1:1,8:9:21.06:254,21,0	0/0:11,0:11:30.03:0,30,285	0/0:28,0:28:72.11:0,72,695	0/0:11,0:11:27.03:0,27,261	0/0:28,0:28:75.06:0,75,710	1/1:2,22:24:40.23:768,40,0	1/1:3,27:31:78.22:928,78,0	1/1:0,11:11:21.06:254,21,0
chr10	23092691	.	AT	A	7670.73	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=12.364;DP=577;FS=31.085;HRun=8;HaplotypeScore=88.4209;InbreedingCoeff=0.9566;MQ=79.77;MQ0=1;MQRankSum=-7.335;QD=26.45;ReadPosRankSum=0.781;VQSLOD=3.0593;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:33.10:0,33,398	0/0:10,0:10:30.08:0,30,352	0/0:19,0:19:42.11:0,42,486	0/0:17,0:17:1.77:0,2,319	1/1:4,18:22:60.09:579,60,0	1/1:4,26:30:81.10:775,81,0	1/1:3,16:19:51.03:479,51,0	0/0:36,0:36:90.26:0,90,1068	1/1:3,17:20:51.08:492,51,0	1/1:0,28:28:84.14:811,84,0	1/1:2,24:26:72.11:695,72,0	1/1:2,16:18:48.07:463,48,0	1/1:2,21:23:63.10:608,63,0	1/1:4,22:26:69.10:661,69,0	0/0:21,1:22:31.20:0,31,650	0/0:26,0:26:66.20:0,66,797	0/0:8,0:8:24.07:0,24,290	0/0:14,0:14:36.11:0,36,434	0/0:20,0:21:63.06:0,63,738	0/0:28,0:28:81.23:0,81,958	0/0:17,0:17:45.14:0,45,543	1/1:1,18:19:57.08:545,57,0	1/1:2,19:21:57.09:550,57,0	1/1:0,19:19:51.08:492,51,0	1/1:2,17:19:54.09:521,54,0	0/0:26,0:25:72.22:0,72,870	0/0:25,0:25:72.20:0,72,856	0/0:2,0:2:6.02:0,6,72
chr10	23092729	.	GTTT	G	8770.98	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=7.332;DP=529;FS=10.120;HRun=12;HaplotypeScore=109.3632;InbreedingCoeff=0.9633;MQ=72.23;MQ0=1;MQRankSum=-10.919;QD=31.21;ReadPosRankSum=3.540;VQSLOD=3.3428;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:7:15.05:0,15,263	0/0:6,0:6:18.06:0,18,338	0/0:16,0:12:25.58:0,26,269	0/0:22,0:14:5.54:0,6,73	1/1:3,22:25:66.19:833,66,0	1/1:4,24:28:63.19:795,63,0	1/1:4,10:14:36.11:454,36,0	0/0:3,0:20:24.18:0,24,71	1/1:2,15:17:39.11:493,39,0	1/1:7,36:43:99:1362,108,0	1/1:4,21:25:63.17:794,63,0	1/1:2,10:12:30.08:379,30,0	1/1:2,21:23:60.17:743,60,0	1/1:4,21:25:63.12:796,63,0	0/0:3,0:17:31.13:0,31,232	0/0:2,0:20:50.83:0,51,427	0/0:9,0:9:24.07:0,24,441	0/0:15,0:15:36.10:0,36,642	0/0:18,0:20:49.39:0,49,891	0/0:27,0:28:75.25:0,75,1414	0/0:13,0:13:36.08:0,36,621	1/1:1,16:17:39.07:493,39,0	1/1:2,15:17:45.13:568,45,0	1/1:2,10:12:24.07:303,24,0	1/1:3,20:23:60.16:758,60,0	0/0:4,0:22:24.87:0,25,64	0/0:5,0:27:26.98:0,27,76	0/0:0,0:4:4.98:0,5,11
chr10	23095059	.	CA	C	2690.27	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=7.606;DP=560;FS=0.424;HRun=6;HaplotypeScore=58.5545;InbreedingCoeff=0.9795;MQ=79.63;MQ0=0;MQRankSum=-1.516;QD=26.38;ReadPosRankSum=-0.129;VQSLOD=3.6520;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:45.15:0,45,592	0/0:9,0:9:24.08:0,24,316	0/0:12,0:12:33.08:0,33,409	0/0:14,0:14:35.93:0,36,418	0/0:35,0:35:99:0,99,1303	0/0:22,0:22:63.20:0,63,829	0/0:8,0:8:24.08:0,24,316	1/1:4,24:28:72.18:774,72,0	0/0:20,0:20:54.18:0,54,710	0/0:33,0:33:99:0,99,1303	0/0:27,0:27:78.25:0,78,1017	0/0:15,0:15:39.13:0,39,513	0/0:28,0:28:84.27:0,84,1095	0/0:16,0:16:48.14:0,48,617	0/0:24,0:24:63.20:0,63,829	0/0:20,0:20:60.20:0,60,788	0/0:14,0:14:42.14:0,42,553	0/0:11,0:11:30.10:0,30,395	0/0:24,0:24:69.20:0,69,868	0/0:34,0:34:90.29:0,90,1184	0/0:10,0:10:30.10:0,30,395	0/0:7,0:7:18.06:0,18,237	0/0:17,0:17:48.16:0,48,632	0/0:3,0:3:9.03:0,9,118	0/0:39,0:39:99:0,111,1446	1/1:3,20:23:23.72:606,24,0	1/1:1,35:36:99:1148,108,0	1/1:0,15:15:30.08:322,30,0
chr10	23095105	.	A	AT	4210.09	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-14.433;DP=530;FS=11.934;HRun=6;HaplotypeScore=51.5346;InbreedingCoeff=0.9892;MQ=71.00;MQ0=0;MQRankSum=0.207;QD=29.86;ReadPosRankSum=0.985;VQSLOD=4.6474;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:60.13:0,60,612	1/1:1,10:11:24.08:302,24,0	0/0:8,0:8:15.01:0,15,145	0/0:12,0:13:27.05:0,27,269	0/0:36,0:35:96.21:0,96,979	0/0:17,0:17:45.10:0,45,459	0/0:5,0:5:15.03:0,15,152	0/0:29,0:29:81.17:0,81,820	0/0:19,0:19:51.12:0,51,520	0/0:26,0:26:75.17:0,75,765	0/0:26,0:26:63.13:0,63,636	0/0:11,0:11:27.04:0,27,269	0/0:23,0:23:66.12:0,66,664	0/0:18,0:18:51.12:0,51,520	1/1:1,13:14:39.12:491,39,0	1/1:2,21:23:57.18:717,57,0	1/1:0,14:14:39.12:491,39,0	1/1:5,8:13:21.03:247,21,0	1/1:6,25:31:78.25:981,78,0	1/1:7,15:22:45.14:566,45,0	1/1:2,11:13:33.11:415,33,0	0/0:7,0:7:18.04:0,18,184	0/0:16,0:16:45.06:0,45,444	0/0:5,0:5:15.03:0,15,153	0/0:33,0:33:87.19:0,87,887	0/0:28,0:28:72.15:0,72,734	0/0:37,0:37:96.18:0,96,965	0/0:11,0:11:33.08:0,33,337
chr10	23096220	.	A	AT	2076.86	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-10.759;DP=612;FS=2.613;HRun=1;HaplotypeScore=95.2754;InbreedingCoeff=0.9871;MQ=79.97;MQ0=0;MQRankSum=-0.466;QD=37.09;ReadPosRankSum=2.394;VQSLOD=4.0373;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:51.17:0,51,660	0/0:6,0:6:18.06:0,18,233	0/0:14,0:14:33.95:0,34,324	0/0:16,0:16:44.96:0,45,488	0/0:32,0:32:92.02:0,92,617	0/0:34,0:34:97.79:0,98,655	0/0:20,0:20:47.37:0,47,324	0/0:31,0:31:87.26:0,87,1082	0/0:26,0:26:74.16:0,74,499	0/0:22,0:22:65.28:0,65,436	0/0:17,0:17:50.39:0,50,342	0/0:22,0:22:59.33:0,59,393	0/0:36,0:36:99:0,101,698	0/0:31,0:31:79.96:0,80,534	1/1:2,23:25:69.23:1032,69,0	1/1:0,31:31:78.26:1166,78,0	0/0:16,0:16:48.16:0,48,620	0/0:10,0:10:30.10:0,30,386	0/0:10,0:10:30.09:0,30,377	0/0:22,0:22:66.18:0,66,824	0/0:13,0:13:39.12:0,39,493	0/0:27,0:27:76.91:0,77,505	0/0:26,0:26:71.27:0,71,484	0/0:14,0:14:35.44:0,35,230	0/0:21,0:21:56.37:0,56,375	0/0:31,0:31:87.25:0,87,1089	0/0:37,0:37:99:0,105,1318	0/0:5,0:5:15.05:0,15,194
chr10	23096221	.	TA	T	8140.19	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-1.671;DP=608;FS=4.159;HRun=8;HaplotypeScore=73.1192;InbreedingCoeff=0.9970;MQ=80.09;MQ0=0;MQRankSum=-0.489;QD=25.28;ReadPosRankSum=3.396;VQSLOD=5.7734;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:51.16:0,51,616	0/0:7,0:7:21.05:0,21,242	0/0:13,0:13:30.89:0,31,313	0/0:17,0:17:45.04:0,45,473	1/1:2,29:31:87.14:840,87,0	1/1:2,32:34:93.15:898,93,0	1/1:2,17:19:42.07:405,42,0	0/0:31,0:31:84.24:0,84,996	1/1:2,23:25:69.11:666,69,0	1/1:0,22:22:66.11:637,66,0	1/1:3,14:17:42.07:406,42,0	1/1:0,21:21:60.10:579,60,0	1/1:6,30:36:84.13:811,84,0	1/1:2,28:30:75.12:724,75,0	0/0:23,0:23:66.76:0,67,367	0/0:31,0:31:75.47:0,75,414	0/0:16,0:16:48.13:0,48,566	0/0:11,0:11:33.09:0,33,386	0/0:10,0:10:27.08:0,27,326	0/0:22,0:22:63.19:0,63,759	0/0:13,0:13:36.11:0,36,435	1/1:1,26:27:69.11:666,69,0	1/1:2,23:25:63.10:608,63,0	1/1:0,14:14:36.06:348,36,0	1/1:0,21:21:57.09:550,57,0	0/0:33,0:33:90.24:0,90,1052	0/0:37,0:37:99:0,99,1195	0/0:5,0:5:15.05:0,15,181
chr10	23097716	.	TA	T	1255.71	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.486;DP=604;FS=15.178;HRun=7;HaplotypeScore=57.8797;InbreedingCoeff=0.9941;MQ=85.04;MQ0=0;MQRankSum=-4.445;QD=24.62;ReadPosRankSum=1.031;VQSLOD=2.6660;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:45.13:0,45,554	0/0:9,0:9:24.08:0,24,302	0/0:22,0:22:39.84:0,40,619	0/0:19,0:19:48.15:0,48,588	0/0:31,0:31:93.28:0,93,1157	0/0:28,0:28:81.25:0,81,1006	0/0:15,0:15:45.14:0,45,566	0/0:33,0:33:81.25:0,81,1008	0/0:13,0:13:33.09:0,33,402	0/0:26,0:26:72.23:0,72,900	0/0:27,0:27:75.24:0,75,941	0/0:18,0:18:48.15:0,48,604	0/0:24,0:24:69.20:0,69,854	0/0:23,0:23:63.18:0,63,767	1/1:2,24:26:72.16:735,72,0	1/1:2,23:25:63.14:643,63,0	0/0:22,0:21:60.18:0,60,740	0/0:18,0:18:45.14:0,45,564	0/0:19,0:19:48.15:0,48,593	0/0:34,0:34:87.28:0,87,1094	0/0:7,0:7:18.06:0,18,226	0/0:16,0:16:48.15:0,48,604	0/0:21,0:21:57.16:0,57,691	0/0:21,0:21:57.17:0,57,705	0/0:26,0:26:75.18:0,75,902	0/0:22,0:22:63.20:0,63,793	0/0:31,0:31:93.26:0,93,1153	0/0:10,0:10:27.09:0,27,340
chr10	23098876	.	T	TA	7109.48	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-11.058;DP=524;FS=0.719;HRun=7;HaplotypeScore=46.5994;InbreedingCoeff=0.9876;MQ=78.28;MQ0=0;MQRankSum=0.349;QD=27.45;ReadPosRankSum=1.180;VQSLOD=5.3228;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:30.05:0,30,290	0/0:6,0:6:15.02:0,15,145	0/0:13,0:12:15.89:0,16,144	0/0:12,0:12:26.89:0,27,254	1/1:2,24:26:69.05:769,69,0	1/1:3,19:22:51.16:616,51,0	1/1:2,8:10:9.91:111,10,0	0/0:35,0:35:90.12:0,90,865	1/1:1,13:14:36.11:435,36,0	1/1:2,19:21:51.10:577,51,0	1/1:5,18:23:60.17:715,60,0	1/1:4,20:24:51.16:616,51,0	1/1:4,23:27:54.17:653,54,0	1/1:7,22:29:72.21:860,72,0	0/0:21,0:21:60.10:0,60,579	0/0:22,0:22:60.08:0,60,574	0/0:13,0:13:36.06:0,36,348	0/0:17,0:17:45.07:0,45,434	0/0:18,0:18:51.08:0,51,493	0/0:21,0:21:57.08:0,57,548	0/0:8,0:8:21.03:0,21,203	1/1:0,15:15:33.06:382,33,0	1/1:2,19:21:42.13:507,42,0	1/1:1,10:11:30.09:362,30,0	1/1:2,14:16:19.49:506,19,0	0/0:20,0:20:48.06:0,48,458	0/0:35,0:34:96.15:0,96,927	0/0:14,0:14:39.06:0,39,377
chr10	23099483	.	A	AT	5700.13	PASS	AB=1.000;AC=27;AF=0.482;AN=56;BaseQRankSum=-10.674;DP=376;FS=13.453;HRun=7;HaplotypeScore=34.8350;InbreedingCoeff=0.9237;MQ=66.79;MQ0=0;MQRankSum=0.923;QD=31.15;ReadPosRankSum=2.675;VQSLOD=3.6394;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:45.07:0,45,435	0/0:7,0:7:21.03:0,21,203	0/1:7,0:5:16.46:16,0,19	0/0:10,0:7:15.01:0,15,136	1/1:1,12:13:36.11:430,36,0	1/1:1,15:16:39.12:471,39,0	1/1:1,10:11:30.09:362,30,0	0/0:37,0:37:99:0,99,956	1/1:1,10:11:30.09:362,30,0	1/1:0,13:13:39.12:471,39,0	1/1:3,11:14:33.10:399,33,0	1/1:2,11:13:33.10:399,33,0	1/1:1,17:18:51.16:616,51,0	1/1:0,15:15:42.13:507,42,0	0/0:5,0:5:15.02:0,15,145	0/0:13,0:13:36.05:0,36,342	0/0:12,0:12:33.05:0,33,319	0/0:9,0:9:24.03:0,24,232	0/0:9,0:9:21.03:0,21,203	0/0:14,0:14:39.06:0,39,377	0/0:17,0:17:48.08:0,48,464	1/1:1,7:8:21.06:253,21,0	1/1:0,15:15:45.14:544,45,0	1/1:1,10:11:24.07:290,24,0	1/1:1,17:18:48.15:580,48,0	0/0:16,0:16:45.07:0,45,435	0/0:18,0:18:51.08:0,51,492	0/0:9,0:9:24.04:0,24,232
chr10	23101252	.	T	TA	2966.11	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-10.082;DP=687;FS=0.000;HRun=9;HaplotypeScore=70.0037;InbreedingCoeff=0.9460;MQ=78.37;MQ0=1;MQRankSum=-0.794;QD=23.54;ReadPosRankSum=-0.749;VQSLOD=4.0839;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:44.97:0,45,386	1/1:1,8:9:1.02:239,1,0	0/0:29,0:24:41.88:0,42,353	0/0:27,0:25:17.51:0,18,302	0/0:38,0:39:99:0,110,939	0/0:24,0:24:62.97:0,63,547	0/0:12,0:12:32.99:0,33,286	0/0:38,0:38:89.92:0,90,775	0/0:19,0:20:47.01:0,47,396	0/0:22,0:22:59.96:0,60,514	0/0:27,0:27:65.98:0,66,573	0/0:24,0:24:65.89:0,66,558	0/0:30,0:30:77.94:0,78,673	0/0:21,0:21:56.98:0,57,495	0/0:26,0:26:77.97:0,78,675	0/0:24,0:25:68.01:0,68,579	1/1:6,19:25:35.59:543,36,0	1/1:3,17:20:45.12:498,45,0	1/1:5,20:25:66.14:711,66,0	1/1:3,24:28:48.97:737,49,0	1/1:5,14:19:39.05:417,39,0	0/0:22,0:22:59.96:0,60,516	0/0:32,0:32:86.94:0,87,750	0/0:20,0:20:50.95:0,51,437	0/0:23,1:24:29.78:0,30,485	0/0:35,0:36:98:0,98,835	0/0:38,0:37:99:0,108,930	0/0:7,0:7:14.28:0,14,144
chr10	23101710	.	A	AG	5456.83	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-13.094;DP=554;FS=9.284;HRun=1;HaplotypeScore=55.2267;InbreedingCoeff=0.9943;MQ=84.94;MQ0=0;MQRankSum=-1.160;QD=42.30;ReadPosRankSum=0.236;VQSLOD=4.6343;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:87.24:0,87,1109	1/1:0,11:11:30.10:450,30,0	0/0:18,0:18:48.10:0,48,591	0/0:16,0:16:42.06:0,42,508	0/0:27,0:27:81.24:0,81,1025	0/0:20,0:20:57.17:0,57,726	0/0:14,0:14:42.14:0,42,545	0/0:33,0:33:93.28:0,93,1174	0/0:21,0:21:60.19:0,60,779	0/0:15,0:15:39.13:0,39,506	0/0:19,0:19:57.16:0,57,710	0/0:18,0:18:51.15:0,51,644	0/0:20,0:20:60.20:0,60,778	0/0:24,0:24:69.22:0,69,896	0/0:23,0:23:69.22:0,69,896	0/0:13,0:13:39.12:0,39,493	1/1:1,34:35:96.33:1438,96,0	1/1:0,12:12:33.07:469,33,0	1/1:1,27:28:81.27:1212,81,0	1/1:0,23:23:69.23:1034,69,0	1/1:1,19:19:57.19:854,57,0	0/0:23,0:23:69.22:0,69,895	0/0:19,0:19:57.19:0,57,739	0/0:15,0:15:45.13:0,45,569	0/0:15,0:15:45.12:0,45,557	0/0:13,0:13:36.11:0,36,456	0/0:19,0:19:54.18:0,54,701	0/0:8,0:8:12.63:0,13,225
chr10	23104327	.	TCACAGACACAGA	T	3643.15	PASS	AB=1.000;AC=33;AF=0.660;AN=50;BaseQRankSum=-3.193;DP=801;FS=15.974;HRun=0;HaplotypeScore=238.4647;InbreedingCoeff=0.6354;MQ=63.21;MQ0=16;MQRankSum=-1.157;QD=7.82;ReadPosRankSum=-0.178;VQSLOD=0.8602;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:36:24.33:0,24,364	1/1:8,3:11:3.44:21,3,0	./.	0/0:39,0:17:0.94:0,1,2	1/1:28,0:28:3.01:58,3,0	1/1:26,0:26:18.02:346,18,0	1/1:23,0:22:12.04:271,12,0	./.	1/1:14,8:21:3.01:101,3,0	1/1:48,0:48:12.04:281,12,0	0/0:11,1:11:0:0,0,0	1/1:19,15:34:9.39:80,9,0	1/1:15,20:35:30.05:583,30,0	1/1:15,19:34:17.97:258,18,0	0/0:22,0:40:15.84:0,16,187	0/0:16,0:30:11.76:0,12,86	1/1:28,2:30:15.05:371,15,0	0/1:21,0:21:30.70:130,0,31	1/1:15,2:17:6.02:170,6,0	1/1:27,0:27:9.03:125,9,0	1/1:27,0:24:22.37:553,22,0	1/1:25,0:25:6.02:75,6,0	./.	1/1:25,9:34:0.47:1,0,0	1/1:24,0:24:9.03:221,9,0	0/0:39,0:37:38.78:0,39,453	0/0:45,0:43:29.27:0,29,835	0/0:3,0:3:6.02:0,6,188
chr10	23104573	.	TCACAGA	T	2773.32	PASS	AB=1.000;AC=13;AF=0.271;AN=48;BaseQRankSum=-3.866;DP=1134;FS=21.558;HRun=0;HaplotypeScore=178.4520;InbreedingCoeff=0.6998;MQ=43.52;MQ0=207;MQRankSum=3.263;QD=10.05;ReadPosRankSum=-0.609;VQSLOD=0.7297;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:40:30.83:0,31,378	0/0:14,0:13:9.88:0,10,124	./.	0/0:116,0:2:3.88:0,4,27	0/0:22,0:17:2.84:0,3,14	0/1:22,0:15:7.30:176,0,7	1/1:36,0:29:17.54:151,18,0	0/0:39,0:29:33:0,33,344	0/0:18,20:32:8.13:0,8,41	1/1:22,12:29:18.69:292,19,0	./.	1/1:47,0:40:35.76:703,36,0	1/1:52,0:47:47.89:698,48,0	1/1:65,0:58:25.13:902,25,0	0/0:57,0:52:54.84:0,55,515	0/0:53,0:51:30.79:0,31,523	0/0:60,0:57:59.18:0,59,696	0/0:35,0:30:49.36:0,49,353	0/0:23,0:7:8.73:0,9,60	0/0:25,0:19:5.74:0,6,41	0/0:88,0:70:38.29:0,38,523	0/0:25,11:24:2.60:0,3,10	1/1:20,0:15:2.92:17,3,0	./.	./.	0/0:35,0:24:38:0,38,492	0/0:14,0:14:16.77:0,17,330	0/0:1,0:1:2.98:0,3,21
chr10	23107240	.	TTC	T	1182.12	PASS	AB=0.795;AC=24;AF=0.500;AN=48;BaseQRankSum=1.346;DP=562;FS=59.589;HRun=0;HaplotypeScore=87.7993;InbreedingCoeff=0.5570;MQ=69.43;MQ0=11;MQRankSum=3.174;QD=4.51;ReadPosRankSum=3.422;VQSLOD=0.1358;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:13.68:0,14,109	./.	./.	./.	1/1:14,10:24:21.55:309,22,0	0/1:10,10:20:12.88:86,0,13	0/0:20,0:16:18.04:0,18,242	0/0:31,0:31:25.19:0,25,250	1/1:8,5:13:9.02:98,9,0	1/1:18,5:23:4.99:95,5,0	1/1:17,0:17:3:29,3,0	1/1:12,9:21:2.31:119,2,0	1/1:14,4:17:5.58:46,6,0	1/1:12,8:20:9.02:99,9,0	0/0:12,0:23:18:0,18,174	0/1:20,2:24:45.90:46,0,280	0/0:15,0:15:2.97:0,3,20	0/0:4,0:3:3:0,3,29	0/0:14,0:13:1.25:0,1,3	0/0:12,0:12:2.71:0,3,23	./.	1/1:13,1:14:5.72:53,6,0	1/1:13,7:20:6.01:66,6,0	1/1:17,5:23:17.88:178,18,0	1/1:20,4:24:14.71:128,15,0	0/0:33,0:33:28.26:0,28,295	0/0:12,0:27:14.90:0,15,152	0/0:10,0:9:12.06:0,12,107
chr10	23107507	.	A	AG	4182.09	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-9.662;DP=645;FS=5.249;HRun=0;HaplotypeScore=57.6606;InbreedingCoeff=0.9629;MQ=88.43;MQ0=0;MQRankSum=-2.053;QD=43.11;ReadPosRankSum=2.478;VQSLOD=4.2523;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:63.18:0,63,859	1/1:0,7:7:21.07:335,21,0	0/0:25,0:25:75.23:0,75,1029	0/0:21,0:21:54.15:0,54,719	0/0:39,0:39:99:0,114,1594	0/0:24,0:24:72.24:0,72,1006	0/0:16,0:16:48.16:0,48,670	0/0:38,0:38:99:0,111,1484	0/0:27,0:27:78.23:0,78,1056	0/0:31,0:31:93.28:0,93,1277	0/0:31,0:31:93.21:0,93,1245	0/0:24,0:24:72.22:0,72,976	0/0:32,0:32:96.30:0,96,1312	0/0:21,0:21:60.20:0,60,839	0/0:28,0:28:81.24:0,81,1083	0/0:16,0:16:45.13:0,45,599	1/1:0,18:18:48.16:767,48,0	1/1:1,7:8:18.06:287,18,0	1/1:2,19:21:54.15:828,54,0	1/1:0,13:13:39.13:623,39,0	1/1:1,29:30:84.29:1342,84,0	0/0:24,0:24:72.18:0,72,967	0/0:26,0:26:78.21:0,78,1018	0/0:15,0:15:45.14:0,45,613	0/0:18,0:18:51.17:0,51,713	0/0:38,0:38:99:0,114,1594	0/0:31,0:31:93.30:0,93,1285	0/0:1,0:1:3.01:0,3,42
chr10	23107816	.	A	ACT	6981.70	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-3.438;DP=378;FS=0.000;HRun=0;HaplotypeScore=44.8028;InbreedingCoeff=0.9694;MQ=87.00;MQ0=2;MQRankSum=-1.090;QD=47.17;ReadPosRankSum=-2.146;VQSLOD=4.6791;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,8:8:21.07:385,21,0	1/1:0,6:6:18.06:330,18,0	0/0:16,0:16:39.02:0,39,517	0/0:10,0:10:14.93:0,15,274	0/0:23,0:23:63.20:0,63,878	0/0:22,0:22:57.18:0,57,799	0/0:6,0:6:15.05:0,15,215	1/1:2,33:35:99:1761,99,0	0/0:11,0:11:33.10:0,33,455	0/0:16,0:16:48.16:0,48,683	0/0:23,0:23:66.20:0,66,927	0/0:6,0:6:18.06:0,18,258	0/0:13,0:13:36.12:0,36,515	0/0:15,0:15:45.15:0,45,645	0/0:3,0:3:6.02:0,6,86	0/0:7,0:7:21.07:0,21,301	1/1:1,10:11:30.10:549,30,0	1/1:0,14:14:42.14:770,42,0	1/1:0,8:8:24.08:427,24,0	1/1:0,12:12:36.12:660,36,0	1/1:0,8:8:18.06:329,18,0	0/0:12,0:12:36.12:0,36,516	0/0:17,0:17:51.17:0,51,731	0/0:13,0:13:30.08:0,30,411	0/0:17,0:17:38.39:0,38,596	1/1:1,20:21:20.22:1057,20,0	1/1:0,12:12:27.09:495,27,0	1/1:4,9:11:11.39:219,11,0
chr10	23107893	.	CATATATATATATAT	C	4558.43	PASS	AB=1.000;AC=22;AF=0.550;AN=40;BaseQRankSum=1.302;DP=184;FS=0.000;HRun=0;HaplotypeScore=86.5770;InbreedingCoeff=0.5883;MQ=80.86;MQ0=3;MQRankSum=-4.946;QD=43.83;ReadPosRankSum=3.886;VQSLOD=3.6228;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:4:2.22:0,2,7	./.	0/1:9,0:9:0:0,0,0	0/1:10,0:6:17.90:18,0,176	1/1:2,6:10:21.07:526,21,0	1/1:4,17:21:39.13:1476,39,0	1/1:3,3:6:6.02:157,6,0	0/0:18,0:25:42.14:0,42,1454	1/1:1,2:3:6.02:240,6,0	1/1:2,4:5:10.56:267,11,0	1/1:8,3:11:6.02:240,6,0	./.	1/1:4,2:6:9.03:360,9,0	1/1:3,2:6:9.03:338,9,0	0/0:1,0:1:3.01:0,3,171	./.	0/0:10,0:10:3.01:0,3,182	0/0:8,0:8:12.04:0,12,712	./.	./.	./.	./.	1/1:1,2:3:6.02:240,6,0	./.	1/1:4,8:13:18.06:697,18,0	0/0:7,0:7:6.02:0,6,225	0/0:1,0:2:3.01:0,3,62	0/0:2,0:10:21.07:0,21,701
chr10	23109481	.	T	TC	2926.92	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=15.533;DP=670;FS=4.180;HRun=0;HaplotypeScore=95.1093;InbreedingCoeff=0.9957;MQ=87.36;MQ0=0;MQRankSum=-3.767;QD=27.10;ReadPosRankSum=2.066;VQSLOD=4.2869;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:96.32:0,96,1342	1/1:6,4:10:27.58:258,28,0	0/0:24,0:24:71.60:0,72,972	0/0:24,0:24:64.44:0,64,847	0/0:35,0:35:99:0,105,1432	0/0:39,0:39:99:0,111,1518	0/0:16,0:16:48.14:0,48,653	0/0:40,0:40:99:0,114,1595	0/0:24,0:24:72.24:0,72,1006	0/0:22,0:22:66.20:0,66,879	0/0:17,0:17:51.16:0,51,697	0/0:22,0:22:66.21:0,66,906	0/0:30,0:30:90.29:0,90,1240	0/0:20,0:20:57.18:0,57,780	0/0:32,0:32:96.32:0,96,1341	0/0:25,0:25:75.25:0,75,1048	1/1:17,8:25:59.41:624,59,0	1/1:6,1:7:20.93:204,21,0	1/1:9,7:16:47.97:517,48,0	1/1:28,10:38:99:1127,110,0	1/1:11,1:12:33.09:385,33,0	0/0:22,0:22:63.20:0,63,864	0/0:35,0:35:99:0,105,1433	0/0:28,0:28:84.24:0,84,1151	0/0:21,0:21:63.21:0,63,880	0/0:25,0:25:75.24:0,75,1034	0/0:24,0:24:69.21:0,69,932	0/0:5,0:5:15.05:0,15,210
chr10	23109483	.	GT	G	2078.69	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=15.474;DP=665;FS=3.527;HRun=2;HaplotypeScore=97.3169;InbreedingCoeff=0.9918;MQ=87.90;MQ0=0;MQRankSum=-2.779;QD=19.07;ReadPosRankSum=1.666;VQSLOD=3.8037;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:96.33:0,96,1439	1/1:7,3:10:14.13:163,14,0	0/0:23,0:23:69.16:0,69,971	0/0:25,0:25:70.94:0,71,925	0/0:36,0:36:99:0,102,1486	0/0:40,0:40:99:0,120,1779	0/0:15,0:15:45.13:0,45,635	0/0:40,0:40:99:0,114,1691	0/0:25,0:25:75.25:0,75,1122	0/0:19,0:19:57.19:0,57,855	0/0:16,0:16:48.16:0,48,719	0/0:22,0:22:63.21:0,63,943	0/0:29,0:29:84.28:0,84,1258	0/0:20,0:20:60.19:0,60,879	0/0:32,0:32:93.29:0,93,1365	0/0:24,0:24:72.24:0,72,1078	1/1:17,8:25:56.08:444,56,0	1/1:5,2:7:20.25:166,20,0	1/1:7,9:16:46.75:403,47,0	1/1:29,10:39:99:781,101,0	1/1:10,2:12:33.03:309,33,0	0/0:23,0:23:63.20:0,63,924	0/0:32,0:32:93.32:0,93,1394	0/0:30,0:30:87.28:0,87,1280	0/0:20,0:20:57.19:0,57,855	0/0:24,0:24:72.24:0,72,1080	0/0:24,0:24:72.23:0,72,1060	0/0:5,0:5:15.05:0,15,225
chr10	23110074	.	AC	A	1672.19	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=7.832;DP=678;FS=1.632;HRun=6;HaplotypeScore=69.5005;InbreedingCoeff=0.7792;MQ=74.65;MQ0=0;MQRankSum=0.052;QD=19.44;ReadPosRankSum=0.802;VQSLOD=3.2859;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:78.01:0,78,1020	0/0:13,0:13:39.13:0,39,511	0/0:21,1:22:30.02:0,30,456	0/1:20,0:17:29.19:29,0,263	0/0:28,0:28:78.23:0,78,995	0/0:30,0:30:90.29:0,90,1183	0/0:27,0:27:72.23:0,72,946	0/0:23,0:23:60.16:0,60,739	0/0:16,0:16:45.15:0,45,592	0/0:23,0:23:66.19:0,66,822	0/0:22,0:22:63.18:0,63,798	0/0:28,0:28:81.26:0,81,1057	0/0:28,0:28:84.27:0,84,1100	0/0:29,0:29:81.26:0,81,1065	1/1:2,28:30:69.17:741,69,0	1/1:1,35:36:96.24:1032,96,0	0/0:28,0:28:81.25:0,81,1046	0/0:9,0:9:24.08:0,24,316	0/0:26,0:26:63.16:0,63,803	0/0:29,0:29:87.23:0,87,1091	0/0:15,0:15:26.01:0,26,496	0/0:25,0:25:75.24:0,75,966	0/0:23,0:23:60.20:0,60,789	0/0:12,0:12:33.11:0,33,434	0/0:20,0:20:51.17:0,51,670	0/0:25,0:25:75.24:0,75,970	0/0:41,0:41:99:0,120,1559	0/0:18,0:18:54.18:0,54,707
chr10	23110589	.	T	TTATATA	2822.82	PASS	AC=10;AF=0.185;AN=54;BaseQRankSum=6.665;DP=503;FS=4.441;HRun=0;HaplotypeScore=109.3628;InbreedingCoeff=0.9053;MQ=62.05;MQ0=0;MQRankSum=-8.787;QD=44.81;ReadPosRankSum=-0.090;VQSLOD=3.2207;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:63.22:0,63,1371	1/1:1,6:7:15.05:511,15,0	0/0:2,0:2:3.01:0,3,48	0/0:10,0:8:8.06:0,8,73	0/0:38,0:38:99:0,111,2332	0/0:20,0:20:57.18:0,57,1222	0/0:10,0:10:27.09:0,27,599	0/0:47,0:47:99:0,108,2172	0/0:19,0:19:42.14:0,42,895	0/0:25,0:25:60.20:0,60,1331	0/0:31,0:31:78.22:0,78,1684	0/0:18,0:18:45.15:0,45,998	0/0:18,0:18:48.16:0,48,1042	0/0:13,0:13:30.10:0,30,666	0/0:15,0:15:39.12:0,39,825	0/0:21,0:21:60.21:0,60,1331	1/1:5,15:19:30.10:994,30,0	1/1:1,4:7:9.03:244,9,0	1/1:9,3:13:21.05:544,21,0	1/1:4,12:16:21.07:697,21,0	./.	0/0:4,0:4:9.03:0,9,200	0/0:17,0:17:48.16:0,48,1044	0/0:13,0:13:39.13:0,39,865	0/0:28,0:28:81.24:0,81,1712	0/0:23,0:23:63.21:0,63,1315	0/0:37,0:37:99:0,105,2244	0/0:5,0:5:12.04:0,12,266
chr10	23111857	.	G	GA	4035.91	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=2.215;DP=664;FS=8.952;HRun=4;HaplotypeScore=69.0558;InbreedingCoeff=0.9841;MQ=87.41;MQ0=0;MQRankSum=-4.419;QD=35.40;ReadPosRankSum=-1.277;VQSLOD=3.2843;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,24:25:66.18:882,66,0	0/0:7,0:7:21.06:0,21,238	0/0:26,0:26:69.17:0,69,766	0/0:23,0:22:57.10:0,57,600	0/0:36,0:36:99:0,102,1146	0/0:25,0:25:72.20:0,72,817	0/0:17,0:17:48.14:0,48,545	1/1:5,28:33:84.24:1099,84,0	0/0:32,0:32:87.23:0,87,977	0/0:19,0:19:54.15:0,54,606	0/0:22,0:22:60.13:0,60,662	0/0:36,0:36:96.26:0,96,1079	0/0:30,0:30:84.20:0,84,931	0/0:29,0:29:81.20:0,81,899	0/0:24,0:24:66.17:0,66,739	0/0:34,0:34:99:0,99,1123	0/0:26,0:26:69.15:0,69,768	0/0:9,0:9:21.06:0,21,238	0/0:19,0:19:57.15:0,57,636	0/0:23,0:23:66.19:0,66,749	0/0:9,0:9:27.06:0,27,295	0/0:22,0:22:66.19:0,66,749	0/0:32,0:32:90.25:0,90,1019	0/0:27,0:27:69.20:0,69,783	0/0:23,0:23:66.16:0,66,736	1/1:2,20:22:29.17:784,29,0	1/1:2,27:30:84.28:1148,84,0	1/1:0,4:4:9.03:123,9,0
chr10	23112251	.	A	AACACACACACGCAC	32206.11	PASS	AB=0.569;AC=33;AF=0.589;AN=56;BaseQRankSum=-8.941;DP=602;FS=2.136;HRun=0;HaplotypeScore=236.5324;InbreedingCoeff=0.8670;MQ=71.99;MQ0=5;MQRankSum=-13.876;QD=89.96;ReadPosRankSum=3.056;VQSLOD=4.7762;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:25:24.04:969,24,0	0/0:2,0:13:39.12:0,39,793	0/0:38,0:27:56.85:0,57,1311	0/0:26,0:22:3.90:0,4,1100	1/1:10,25:37:56.58:3800,57,0	1/1:8,12:21:27.09:1724,27,0	1/1:3,13:17:27.09:1745,27,0	0/0:34,0:36:66.24:0,66,3149	1/1:2,4:9:18.06:1196,18,0	1/1:8,18:33:72.06:3806,72,0	1/1:6,17:27:36.12:2392,36,0	1/1:5,7:14:27.09:1745,27,0	1/1:3,7:12:18.06:1140,18,0	1/1:5,10:20:39.13:2404,39,0	1/1:7,16:26:39.13:2338,39,0	1/1:4,15:24:48.16:3152,48,0	0/1:7,0:29:58.97:59,0,1327	0/0:4,0:14:33.09:0,33,744	0/0:3,0:17:20.85:0,21,550	0/0:4,0:27:11.70:0,12,1068	0/0:2,0:6:12.04:0,12,238	1/1:3,11:18:24.08:1588,24,0	1/1:6,8:17:36.12:2185,36,0	1/1:7,0:6:3.01:81,3,0	1/1:4,14:20:30.10:1882,30,0	0/0:26,0:26:66.22:0,66,2469	0/0:28,0:28:74.70:0,75,2543	0/0:12,0:12:27.09:0,27,1102
chr10	23112430	.	CAA	C	16534.11	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=19.191;DP=658;FS=0.000;HRun=2;HaplotypeScore=123.3673;InbreedingCoeff=0.9990;MQ=87.98;MQ0=0;MQRankSum=-5.275;QD=42.07;ReadPosRankSum=6.327;VQSLOD=4.7096;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,36:36:90.23:1453,90,0	0/0:10,0:10:30.10:0,30,600	0/0:23,0:23:56.97:0,57,1235	0/0:27,0:27:78.15:0,78,1377	1/1:0,41:41:96.26:1564,96,0	1/1:0,16:16:33.11:537,33,0	1/1:0,24:24:63.22:1026,63,0	0/0:33,0:33:99:0,99,1965	1/1:0,18:18:54.18:880,54,0	1/1:0,23:23:69.20:1074,69,0	1/1:0,26:26:69.24:1124,69,0	1/1:0,29:29:75.26:1221,75,0	1/1:0,29:29:81.28:1311,81,0	1/1:0,26:26:69.24:1124,69,0	1/1:0,32:32:78.27:1271,78,0	1/1:0,22:22:60.20:978,60,0	0/0:20,0:20:60.19:0,60,1166	0/0:7,0:7:21.07:0,21,426	0/0:19,0:19:51.17:0,51,981	0/0:32,0:32:96.28:0,96,1832	0/0:26,0:26:78.24:0,78,1501	1/1:0,17:17:42.14:685,42,0	1/1:0,22:22:63.22:1027,63,0	1/1:0,11:11:24.08:391,24,0	1/1:0,21:21:54.18:868,54,0	0/0:23,0:23:40.33:0,40,1312	0/0:32,0:31:96.32:0,96,1902	0/0:13,0:13:39.13:0,39,792
chr10	23113139	.	G	GA	11095.75	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-3.807;DP=571;FS=5.335;HRun=1;HaplotypeScore=74.1905;InbreedingCoeff=0.9951;MQ=89.98;MQ0=0;MQRankSum=-1.637;QD=40.79;ReadPosRankSum=2.809;VQSLOD=5.5493;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:54.15:0,54,685	0/0:8,0:8:24.08:0,24,312	0/0:18,0:18:50.50:0,50,601	0/0:25,0:25:38.26:0,38,694	1/1:0,28:28:81.19:1163,81,0	1/1:0,29:29:78.26:1168,78,0	1/1:0,17:17:48.16:719,48,0	0/0:35,0:35:99:0,99,1251	1/1:2,13:15:39.13:584,39,0	1/1:0,24:24:72.22:1037,72,0	1/1:1,21:22:63.21:942,63,0	1/1:0,20:20:54.18:809,54,0	1/1:0,18:18:51.17:764,51,0	1/1:1,21:22:63.21:944,63,0	0/0:21,0:21:63.17:0,63,788	0/0:30,0:30:90.27:0,90,1140	0/0:22,0:22:66.18:0,66,825	0/0:8,0:8:24.04:0,24,293	0/0:17,0:17:48.15:0,48,611	0/0:32,0:32:90.28:0,90,1154	0/0:22,0:22:63.20:0,63,817	1/1:2,18:20:48.16:718,48,0	1/1:0,12:12:33.11:494,33,0	1/1:1,15:16:39.13:583,39,0	1/1:1,28:29:78.26:1169,78,0	0/0:22,0:22:66.21:0,66,844	0/0:16,0:16:42.13:0,42,531	0/0:4,0:4:12.04:0,12,156
chr10	23113638	.	A	AT	13824.77	PASS	AB=0.929;AC=31;AF=0.554;AN=56;BaseQRankSum=2.969;DP=638;FS=27.744;HRun=1;HaplotypeScore=77.3775;InbreedingCoeff=0.9281;MQ=87.00;MQ0=0;MQRankSum=-2.410;QD=35.91;ReadPosRankSum=3.522;VQSLOD=2.9900;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:66.21:0,66,856	0/0:16,0:16:48.14:0,48,609	0/0:22,0:22:60.17:0,60,751	0/0:20,0:20:56.77:0,57,701	1/1:0,36:36:99:1459,99,0	1/1:0,28:28:81.27:1214,81,0	1/1:1,15:16:33.11:495,33,0	0/0:33,0:33:99:0,99,1261	1/1:2,26:28:60.20:899,60,0	1/1:0,24:25:75.25:1112,75,0	1/1:1,19:20:57.15:829,57,0	1/1:1,16:17:48.16:720,48,0	1/1:1,25:26:75.25:1121,75,0	1/1:0,20:20:54.18:809,54,0	1/1:1,26:26:63.21:944,63,0	1/1:0,19:19:57.19:854,57,0	0/0:16,0:16:42.14:0,42,545	0/0:12,0:12:36.08:0,36,446	0/0:19,0:19:54.16:0,54,687	0/0:27,0:27:81.25:0,81,1038	0/0:25,0:25:69.22:0,69,895	1/1:1,13:14:33.07:469,33,0	1/1:0,21:21:60.20:899,60,0	1/1:1,12:13:36.12:539,36,0	1/1:0,36:36:96.33:1439,96,0	0/1:36,3:39:20.47:20,0,1222	0/0:29,0:29:87.25:0,87,1100	0/0:11,0:11:27.09:0,27,351
chr10	23114721	.	TG	T	3121.66	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=10.698;DP=824;FS=2.320;HRun=4;HaplotypeScore=79.6530;InbreedingCoeff=0.9836;MQ=84.72;MQ0=0;MQRankSum=-1.493;QD=31.85;ReadPosRankSum=-2.658;VQSLOD=3.0016;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,156,2146	0/0:13,0:13:39.13:0,39,546	0/0:27,0:27:72.15:0,72,945	0/0:34,0:34:80.88:0,81,1176	0/0:27,0:27:78.25:0,78,1072	0/0:28,0:28:78.25:0,78,1076	0/0:27,0:27:81.26:0,81,1117	1/1:3,39:42:99:1382,117,0	0/0:29,1:30:54.30:0,54,1168	0/0:31,0:31:93.31:0,93,1301	0/0:21,0:21:57.19:0,57,796	0/0:35,0:35:99:0,99,1348	0/0:35,0:35:99:0,102,1406	0/0:48,0:48:99:0,138,1878	0/0:39,0:39:99:0,117,1604	0/0:34,0:34:99:0,99,1386	0/0:28,0:28:81.27:0,81,1134	0/0:18,0:18:51.14:0,51,677	0/0:25,0:25:56.50:0,57,782	0/0:30,0:30:90.27:0,90,1225	0/0:34,0:34:94.49:0,94,1298	0/0:21,0:21:63.21:0,63,881	0/0:21,0:21:63.20:0,63,864	0/0:38,0:38:99:0,111,1537	0/0:28,0:28:78.25:0,78,1077	1/1:0,35:35:99:1248,105,0	1/1:0,18:18:45.14:540,45,0	1/1:0,3:3:9.03:108,9,0
chr10	23115401	.	GTTA	G	9627.72	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=19.888;DP=795;FS=0.623;HRun=0;HaplotypeScore=142.1225;InbreedingCoeff=0.9954;MQ=75.99;MQ0=1;MQRankSum=-4.936;QD=40.80;ReadPosRankSum=2.063;VQSLOD=6.0657;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:93.25:0,93,2080	1/1:2,13:15:33.11:562,33,0	0/0:25,0:25:69.23:0,69,1452	0/0:19,0:19:57.08:0,57,1207	0/0:35,0:35:99:0,105,2413	0/0:34,0:34:99:0,102,2301	0/0:28,0:28:81.28:0,81,1778	1/1:5,32:37:96.22:1514,96,0	0/0:31,0:31:90.29:0,90,1989	0/0:20,0:20:57.19:0,57,1268	0/0:22,0:22:66.23:0,66,1521	0/0:29,0:29:84.29:0,84,1925	0/0:39,0:39:99:0,117,2619	0/0:43,0:43:99:0,123,2716	0/0:50,0:50:99:0,148,3340	0/0:26,0:26:78.27:0,78,1749	1/1:0,16:16:45.15:767,45,0	1/1:0,13:13:37.01:616,37,0	1/1:2,13:15:39.12:637,39,0	1/1:4,27:30:54.18:898,54,0	1/1:1,34:35:69.63:1176,70,0	0/0:41,0:41:99:0,120,2724	0/0:36,0:36:99:0,105,2383	0/0:21,0:21:60.21:0,60,1379	0/0:29,0:29:81.26:0,81,1762	1/1:1,33:34:99:1618,99,0	1/1:0,36:36:96.33:1636,96,0	1/1:0,4:4:12.04:203,12,0
chr10	23116514	.	GTT	G	14595.40	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-5.492;DP=688;FS=3.822;HRun=9;HaplotypeScore=166.3554;InbreedingCoeff=0.9940;MQ=85.97;MQ0=0;MQRankSum=-5.699;QD=27.75;ReadPosRankSum=5.468;VQSLOD=3.2084;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,21:27:63.04:700,63,0	0/0:0,0:4:11.97:0,12,104	0/0:28,0:28:65.66:0,66,929	0/0:31,0:28:70.48:0,70,938	1/1:2,28:30:69.16:789,69,0	1/1:4,24:28:60:663,60,0	1/1:2,16:18:39.11:453,39,0	1/1:7,22:29:71.91:757,72,0	1/1:0,16:16:42.12:489,42,0	1/1:2,31:33:93.20:1065,93,0	1/1:4,15:19:45.09:509,45,0	1/1:2,29:31:81.17:925,81,0	1/1:6,38:44:99:1195,108,0	1/1:3,21:24:51.01:559,51,0	1/1:3,33:36:93.09:1047,93,0	1/1:4,29:33:81.18:927,81,0	0/0:4,0:20:39.06:0,39,377	0/0:2,0:13:27.03:0,27,255	0/0:7,0:22:48.07:0,48,473	0/0:4,0:31:79.57:0,80,721	0/0:0,0:12:30.05:0,30,290	1/1:2,20:22:54.15:629,54,0	1/1:1,29:30:71.87:820,72,0	1/1:0,10:10:24.07:280,24,0	1/1:3,28:31:75.21:871,75,0	1/1:1,30:31:90.21:1010,90,0	1/1:5,19:24:51.14:592,51,0	1/1:0,10:10:27.08:314,27,0
chr10	23116521	.	T	TG	2283.23	PASS	AB=0.980;AC=30;AF=0.536;AN=56;BaseQRankSum=5.001;DP=682;FS=3.295;HRun=0;HaplotypeScore=204.2229;InbreedingCoeff=0.2942;MQ=85.24;MQ0=0;MQRankSum=-0.899;QD=4.37;ReadPosRankSum=12.534;VQSLOD=1.2009;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:22,1:23:0.67:97,0,1	0/0:5,0:5:14.26:0,14,86	0/0:27,0:26:75.17:0,75,929	0/0:32,0:29:78.70:0,79,904	0/1:32,0:32:60.33:121,0,60	1/1:26,2:28:42.69:195,43,0	1/1:16,0:16:27.10:109,27,0	1/1:24,2:26:12.37:281,12,0	1/1:16,0:16:20.09:59,20,0	1/1:34,0:34:10.80:192,11,0	1/1:15,1:16:27.88:119,28,0	1/1:30,0:30:13.40:137,13,0	0/1:42,3:45:41.04:180,0,41	0/1:23,0:23:31.03:31,0,52	0/1:39,1:40:40.33:144,0,40	1/1:31,0:31:10.90:107,11,0	0/0:16,0:16:37.27:0,37,201	0/0:14,0:14:31.87:0,32,194	0/0:20,0:20:53.76:0,54,330	0/0:33,0:33:66.79:0,67,428	0/0:13,0:13:31.20:0,31,172	0/1:23,0:23:45.74:63,0,46	0/1:30,0:30:17.96:61,0,18	0/1:12,0:12:25.32:26,0,25	0/1:32,1:33:16.16:146,0,16	1/1:32,0:32:31.73:283,32,0	0/1:21,1:22:20.53:88,0,21	1/1:10,0:10:14.89:43,15,0
chr10	23116927	.	GT	G	14129.52	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-0.268;DP=595;FS=0.639;HRun=8;HaplotypeScore=65.2020;InbreedingCoeff=0.9881;MQ=85.90;MQ0=0;MQRankSum=-9.987;QD=25.41;ReadPosRankSum=6.623;VQSLOD=4.7552;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,27:29:75.12:724,75,0	1/1:0,8:8:24.04:232,24,0	0/0:20,1:21:28.24:0,28,594	0/0:18,0:18:54.15:0,54,622	1/1:3,31:34:87.13:840,87,0	1/1:1,17:18:45.07:435,45,0	1/1:1,20:21:60.10:579,60,0	1/1:8,33:41:96.13:921,96,0	1/1:0,19:19:51.08:493,51,0	1/1:0,21:21:63.10:608,63,0	1/1:0,15:15:45.07:435,45,0	1/1:3,19:22:57.09:550,57,0	1/1:1,20:21:48.08:463,48,0	1/1:2,16:18:48.08:464,48,0	1/1:6,26:32:66.10:637,66,0	1/1:0,21:21:63.10:608,63,0	1/1:0,28:28:75.12:724,75,0	1/1:0,19:19:57.09:550,57,0	1/1:2,18:20:54.08:521,54,0	1/1:1,21:22:66.10:635,66,0	1/1:0,9:9:21.03:202,21,0	1/1:2,15:17:42.06:406,42,0	1/1:2,15:17:39.06:377,39,0	1/1:2,11:13:33.05:319,33,0	1/1:1,24:25:72.12:695,72,0	1/1:2,27:29:78.12:753,78,0	1/1:1,31:32:84.13:811,84,0	1/1:0,5:5:15.02:145,15,0
chr10	23117569	.	TTAAGACAC	T	4410.66	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=11.122;DP=614;FS=13.776;HRun=0;HaplotypeScore=153.4768;InbreedingCoeff=0.9643;MQ=85.68;MQ0=0;MQRankSum=-11.393;QD=67.86;ReadPosRankSum=1.844;VQSLOD=4.3110;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:57.20:0,57,2564	1/1:0,8:8:21.07:614,21,0	0/0:26,0:26:75.24:0,75,2996	0/0:16,0:16:45.05:0,45,1601	0/0:38,0:38:99:0,114,5076	0/0:20,0:20:60.18:0,60,2494	0/0:15,0:15:45.15:0,45,2037	0/0:45,0:45:99:0,129,5221	0/0:19,0:19:57.20:0,57,2410	0/0:37,0:37:99:0,111,4938	0/0:29,0:29:87.28:0,87,3752	0/0:19,0:19:57.18:0,57,2372	0/0:30,0:30:87.28:0,87,3828	0/0:29,0:29:87.27:0,87,3616	0/0:29,0:29:87.30:0,87,3904	0/0:20,0:20:60.21:0,60,2702	1/1:1,8:9:21.07:614,21,0	1/1:2,4:6:9.03:261,9,0	1/1:3,11:14:33.11:950,33,0	1/1:2,24:26:66.18:1863,66,0	1/1:0,2:2:5.98:108,6,0	0/0:26,0:26:78.24:0,78,3309	0/0:31,0:31:90.76:0,91,3840	0/0:10,0:10:30.10:0,30,1359	0/0:26,0:25:78.27:0,78,3392	0/0:22,0:22:60.21:0,60,2707	0/0:29,0:29:87.30:0,87,3900	0/0:14,0:14:42.14:0,42,1901
chr10	23118881	.	G	GTT	15033.40	PASS	AB=1.000;AC=46;AF=0.821;AN=56;BaseQRankSum=-9.854;DP=703;FS=6.878;HRun=3;HaplotypeScore=91.2832;InbreedingCoeff=0.6657;MQ=60.74;MQ0=13;MQRankSum=3.040;QD=28.26;ReadPosRankSum=4.686;VQSLOD=3.7002;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,18:24:12.60:404,13,0	1/1:1,7:8:24.05:403,24,0	0/0:58,0:31:58.17:0,58,676	0/0:66,0:38:82.11:0,82,918	1/1:0,27:27:68.81:944,69,0	1/1:4,25:29:54.10:919,54,0	1/1:1,15:17:21.07:385,21,0	0/1:31,0:31:90.46:90,0,123	1/1:1,13:12:18.02:295,18,0	1/1:3,29:33:71.96:1246,72,0	1/1:0,22:22:56.84:829,57,0	1/1:0,23:24:27.05:460,27,0	1/1:1,26:27:57.15:1009,57,0	1/1:1,23:24:33.03:533,33,0	1/1:1,24:25:45.15:824,45,0	1/1:0,21:21:38.97:714,39,0	1/1:3,8:11:11.95:149,12,0	1/1:1,24:25:19.10:568,19,0	1/1:2,12:14:36.12:644,36,0	1/1:2,24:27:71.97:1109,72,0	1/1:2,14:17:21.07:384,21,0	1/1:1,27:27:75.04:1198,75,0	1/1:2,25:28:51.13:889,51,0	1/1:1,7:8:12.04:220,12,0	1/1:1,20:21:42.14:769,42,0	0/1:26,0:25:50.55:51,0,135	0/0:36,0:36:77.43:0,77,364	0/0:11,0:11:0.51:0,1,82
chr10	23119078	.	TG	T	8590.42	PASS	AB=0.563;AC=22;AF=0.393;AN=56;BaseQRankSum=-8.811;DP=669;FS=0.000;HRun=1;HaplotypeScore=272.5991;InbreedingCoeff=-0.2426;MQ=50.96;MQ0=3;MQRankSum=8.757;QD=17.75;ReadPosRankSum=10.578;VQSLOD=3.3750;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:3.45:0,3,31	0/0:6,0:6:5.56:0,6,61	0/0:45,0:31:69.84:0,70,1141	0/0:19,0:13:32.75:0,33,412	0/1:7,33:40:99:497,0,118	0/1:3,19:22:19.17:500,0,19	0/1:2,11:13:7.11:345,0,7	1/1:11,32:43:17.42:1125,17,0	0/1:1,17:18:46.64:429,0,47	1/1:7,26:33:27.44:1067,27,0	0/1:6,18:24:99:311,0,108	0/1:6,14:20:99:128,0,141	0/1:3,31:34:99:494,0,127	0/1:3,23:26:99:405,0,118	0/1:5,19:24:99:247,0,152	0/1:3,20:23:67.85:439,0,68	0/0:4,0:4:6.02:0,6,84	0/0:4,0:4:12.04:0,12,192	0/0:24,0:23:66.16:0,66,939	0/0:46,0:45:56.87:0,57,846	0/0:10,0:10:6.02:0,6,96	0/1:4,16:20:99:174,0,136	0/1:7,23:30:99:318,0,200	1/1:2,9:11:14.68:209,15,0	0/1:4,17:21:99:192,0,149	0/1:17,25:42:99:940,0,218	0/1:13,17:30:99:551,0,252	0/1:4,6:10:57.93:223,0,58
chr10	23119080	.	TATGC	T	535.68	PASS	AB=0.971;AC=15;AF=0.268;AN=56;BaseQRankSum=6.243;DP=666;FS=3.044;HRun=0;HaplotypeScore=324.2691;InbreedingCoeff=-0.2179;MQ=50.86;MQ0=3;MQRankSum=-6.293;QD=1.64;ReadPosRankSum=-5.133;VQSLOD=0.8845;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:27:0.73:3,1,0	0/1:6,0:6:17.19:17,0,67	0/0:46,0:31:76.98:0,77,1306	0/0:18,0:12:20.69:0,21,482	0/0:39,1:40:29.27:0,29,604	0/0:23,0:23:35.82:0,36,535	0/1:14,0:14:9:9,0,352	0/1:41,0:41:31.89:32,0,859	0/0:18,0:18:32.97:0,33,460	0/0:32,1:33:49.25:0,49,1002	0/0:24,0:24:26.05:0,26,393	0/1:19,0:19:10.64:11,0,142	0/0:34,0:34:44.92:0,45,509	0/0:25,0:25:38.73:0,39,465	0/1:21,4:25:99:361,0,248	0/1:22,1:23:99:169,0,474	0/1:4,0:4:8.50:8,0,19	0/0:4,0:4:12.02:0,12,159	0/0:25,0:24:17.56:0,18,642	0/1:45,0:44:1.86:2,0,790	0/0:10,0:10:6.02:0,6,100	0/1:21,0:21:2.03:2,0,151	0/1:31,0:31:20.82:21,0,442	0/1:9,2:11:22.26:22,0,216	0/1:19,1:20:4.01:4,0,199	0/1:40,0:40:15.40:15,0,1055	0/0:29,0:29:27.01:0,27,503	0/0:10,0:10:20.38:0,20,301
chr10	23119083	.	GCA	G	301.73	PASS	AB=0.702;AC=5;AF=0.089;AN=56;BaseQRankSum=4.330;DP=643;FS=0.000;HRun=0;HaplotypeScore=306.9064;InbreedingCoeff=0.1703;MQ=50.38;MQ0=3;MQRankSum=-4.262;QD=3.82;ReadPosRankSum=2.177;VQSLOD=2.0278;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:3.01:0,3,40	0/1:2,4:6:40.65:41,0,55	0/0:45,1:31:84.74:0,85,1467	0/0:19,0:13:32.45:0,32,564	0/0:37,0:37:65:0,65,952	0/0:22,0:22:51.04:0,51,749	0/0:13,0:13:31.90:0,32,520	0/0:38,0:38:87.19:0,87,1513	0/0:18,0:18:51.16:0,51,809	0/0:32,0:32:90.28:0,90,1520	0/0:23,0:23:41.77:0,42,689	0/0:19,0:19:40.33:0,40,525	0/0:32,0:32:62.94:0,63,870	0/0:26,0:26:57.17:0,57,853	0/0:22,0:22:17.77:0,18,426	0/0:22,0:22:42.50:0,42,760	1/1:3,0:3:3.01:49,3,0	0/0:3,0:3:9.03:0,9,179	0/1:18,7:24:99:251,0,867	0/1:28,17:44:72.87:73,0,815	0/0:8,2:10:6.02:0,6,121	0/0:18,0:18:37.64:0,38,458	0/0:32,0:32:63.72:0,64,897	0/0:11,0:11:18.69:0,19,309	0/0:19,0:19:46.23:0,46,589	0/0:40,0:40:99:0,120,1867	0/0:27,0:27:69.07:0,69,1066	0/0:10,0:10:27.09:0,27,466
chr10	23119084	.	C	CATCT	10781.58	PASS	AB=0.992;AC=48;AF=0.857;AN=56;BaseQRankSum=-0.931;DP=683;FS=1.134;HRun=0;HaplotypeScore=304.4277;InbreedingCoeff=0.4019;MQ=49.38;MQ0=3;MQRankSum=-1.869;QD=17.42;ReadPosRankSum=0.179;VQSLOD=4.0693;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:27:1.64:9,2,0	0/1:6,0:6:0:0,0,0	0/0:46,0:30:45.13:0,45,770	0/0:18,0:13:19.51:0,20,213	1/1:25,14:39:46.42:553,46,0	1/1:17,3:20:35.96:466,36,0	1/1:15,1:16:26.89:362,27,0	1/1:51,0:51:66.04:828,66,0	1/1:13,5:18:39.07:502,39,0	1/1:29,5:34:90.17:1346,90,0	1/1:20,6:26:26.68:262,27,0	1/1:12,7:19:36.06:372,36,0	1/1:25,11:36:56.81:685,57,0	1/1:19,8:27:53.76:676,54,0	1/1:18,5:23:39.11:527,39,0	1/1:21,3:24:35.98:481,36,0	1/1:3,0:3:3.01:35,3,0	1/1:4,0:4:5.84:42,6,0	0/1:26,0:24:41.38:301,0,41	1/1:43,0:42:13.36:140,13,0	1/1:10,0:10:2.99:24,3,0	1/1:13,7:20:36.02:423,36,0	1/1:22,11:33:51.09:554,51,0	1/1:8,3:11:14.83:192,15,0	1/1:13,9:22:47.97:544,48,0	1/1:40,1:41:16.24:984,16,0	0/1:29,1:30:99:351,0,116	0/1:10,0:10:17.27:122,0,17
chr10	23119097	.	A	ATCTATCTCTGTCTGTCTGTCTGTCTG	7995.43	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=-6.238;DP=708;FS=5.039;HRun=0;HaplotypeScore=569.8803;InbreedingCoeff=0.0353;MQ=50.38;MQ0=4;MQRankSum=1.392;QD=23.24;ReadPosRankSum=-1.636;VQSLOD=0.7421;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:31,0:31:53.03:53,0,195	1/1:10,0:10:9.03:320,9,0	0/0:44,0:32:87.49:0,87,3048	0/0:21,0:18:40.67:0,41,1099	0/1:38,0:38:87.14:87,0,592	0/1:22,0:22:99:102,0,379	0/0:15,0:15:6.35:0,6,371	0/0:55,0:54:23.54:0,24,933	0/1:17,0:17:27.02:27,0,456	0/0:35,0:35:32.71:0,33,886	0/1:27,0:27:13.26:13,0,417	0/1:20,0:20:28.04:28,0,483	0/0:33,0:33:19.39:0,19,877	0/0:29,0:29:11.61:0,12,677	0/0:23,0:23:41.92:0,42,384	0/0:19,0:19:36.19:0,36,310	1/1:2,4:10:3.48:313,3,0	0/1:5,0:5:35.23:355,0,35	1/1:27,0:25:72.20:4478,72,0	1/1:43,0:42:30.06:1092,30,0	0/1:13,0:13:26.75:65,0,27	0/0:22,0:22:0.20:0,0,625	0/0:34,0:34:42.66:0,43,871	0/0:9,0:9:15.50:0,16,176	0/0:24,0:24:10.99:0,11,745	0/1:40,0:40:99:950,0,499	0/1:27,0:27:75.97:76,0,561	0/1:12,0:12:36.19:36,0,148
chr10	23119101	.	G	GTCTA	9691.90	PASS	AB=0.985;AC=40;AF=0.714;AN=56;BaseQRankSum=-1.421;DP=702;FS=1.769;HRun=0;HaplotypeScore=309.2260;InbreedingCoeff=0.4745;MQ=48.59;MQ0=3;MQRankSum=0.432;QD=16.15;ReadPosRankSum=-0.152;VQSLOD=4.1738;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:32,0:32:6.47:70,6,0	0/0:9,0:9:0.20:0,0,1	0/0:42,0:31:36.15:0,36,769	0/0:20,0:17:26.14:0,26,438	1/1:26,14:40:34.54:687,35,0	1/1:19,3:22:33:562,33,0	1/1:15,1:16:20.95:321,21,0	1/1:52,0:51:26.78:241,27,0	1/1:12,4:16:27.08:440,27,0	1/1:29,5:35:63.20:1184,63,0	1/1:19,6:25:29.98:471,30,0	1/1:13,7:20:39.13:668,39,0	1/1:23,11:34:44.99:717,45,0	1/1:21,9:30:47.94:732,48,0	1/1:19,0:24:33.08:406,33,0	1/1:15,0:18:18.05:256,18,0	1/1:9,0:9:3.41:19,3,0	0/0:5,0:5:0.93:0,1,2	0/1:28,0:24:63.91:64,0,70	0/1:43,0:42:38.98:39,0,46	0/0:13,0:13:2.98:0,3,21	1/1:15,7:22:45.11:725,45,0	1/1:22,11:33:57.32:1005,57,0	1/1:7,3:10:5.83:146,6,0	1/1:15,8:24:48.04:823,48,0	0/1:38,0:39:69.05:108,0,69	0/1:27,0:28:5.61:6,0,154	0/0:12,0:12:7.08:0,7,45
chr10	23120398	.	A	AAAAAC	4222.97	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-9.478;DP=483;FS=1.821;HRun=0;HaplotypeScore=85.0155;InbreedingCoeff=0.9434;MQ=70.16;MQ0=0;MQRankSum=-2.227;QD=45.90;ReadPosRankSum=-0.422;VQSLOD=4.7340;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:53.84:0,54,1066	1/1:1,4:5:12:281,12,0	0/0:18,0:15:11.89:0,12,213	0/0:19,0:17:18.54:0,19,268	0/0:15,0:15:33.11:0,33,628	0/0:18,0:18:39.08:0,39,640	0/0:15,0:15:36.12:0,36,684	0/0:25,0:25:53.86:0,54,919	0/0:9,0:9:21.07:0,21,385	0/0:4,0:4:3.01:0,3,57	0/0:14,0:14:36.11:0,36,653	0/0:18,0:18:48.13:0,48,846	0/0:24,0:24:48.11:0,48,767	0/0:22,0:22:63.21:0,63,1136	0/0:24,0:24:54.16:0,54,935	0/0:21,0:21:45.15:0,45,828	1/1:3,15:21:36.02:974,36,0	1/1:5,6:12:12.04:349,12,0	1/1:5,8:17:39.06:870,39,0	1/1:1,14:16:36.12:877,36,0	1/1:1,17:21:30.10:872,30,0	0/0:11,0:11:33.11:0,33,595	0/0:12,0:12:27.09:0,27,500	0/0:22,0:22:60.15:0,60,1008	0/0:19,0:19:42.14:0,42,768	0/0:22,0:22:42.14:0,42,785	0/0:21,0:21:42.13:0,42,751	0/0:8,0:8:24.02:0,24,325
chr10	23120554	.	CAAAT	C	235.36	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=1.337;DP=323;FS=16.688;HRun=0;HaplotypeScore=64.3103;InbreedingCoeff=0.7871;MQ=73.42;MQ0=2;MQRankSum=-0.385;QD=4.90;ReadPosRankSum=-1.097;VQSLOD=-0.0462;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:51.09:0,51,919	1/1:3,1:4:6.01:72,6,0	0/0:13,0:11:27.07:0,27,461	0/0:12,0:11:10.57:0,11,158	0/0:14,0:14:36.11:0,36,638	0/0:13,0:13:33.11:0,33,721	0/0:13,0:13:24.07:0,24,442	0/0:41,0:40:99:0,108,2020	0/0:5,0:5:9.03:0,9,181	0/0:11,0:11:24.08:0,24,522	0/0:10,0:10:21.06:0,21,387	0/0:11,0:11:27.08:0,27,497	0/0:13,0:13:33.10:0,33,664	0/0:9,0:9:18.04:0,18,263	0/0:8,0:8:18.04:0,18,290	0/0:7,0:7:18.06:0,18,342	1/1:4,0:4:1.41:3,1,0	1/1:6,0:6:6.41:42,6,0	1/1:16,1:16:13.30:125,13,0	1/1:8,2:10:9.02:118,9,0	1/1:7,0:7:3:25,3,0	0/0:6,0:6:9.01:0,9,107	0/0:15,0:15:26.96:0,27,404	0/0:6,0:6:6.02:0,6,128	0/0:18,0:18:51.16:0,51,1000	0/0:13,0:13:33.11:0,33,739	0/0:13,0:13:30.09:0,30,590	0/0:3,0:3:9.03:0,9,176
chr10	23120568	.	G	GATAA	1274.76	PASS	AC=10;AF=0.217;AN=46;BaseQRankSum=-5.861;DP=252;FS=7.811;HRun=0;HaplotypeScore=46.4791;InbreedingCoeff=0.5365;MQ=62.61;MQ0=2;MQRankSum=-0.716;QD=14.65;ReadPosRankSum=-2.498;VQSLOD=0.8919;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:13.16:0,13,232	0/0:2,0:2:3:0,3,29	./.	./.	0/0:11,0:11:3.01:0,3,47	0/0:13,0:13:24.08:0,24,375	0/0:7,0:7:9:0,9,96	1/1:49,0:48:45.03:549,45,0	0/0:3,0:3:3.01:0,3,47	0/0:9,0:9:12.04:0,12,188	0/0:7,0:7:9.03:0,9,139	0/0:8,0:8:12.02:0,12,166	0/0:11,0:11:24.06:0,24,352	./.	1/1:5,0:5:0.94:2,1,0	0/0:6,0:6:6.02:0,6,93	./.	0/0:4,0:4:3.01:0,3,42	0/0:13,0:12:3:0,3,29	0/0:8,0:8:6.01:0,6,58	0/0:2,0:2:3.01:0,3,37	./.	0/0:6,0:6:3.01:0,3,47	0/0:2,0:2:3.01:0,3,47	0/0:17,0:17:30.08:0,30,417	1/1:6,8:14:21.05:431,21,0	1/1:3,7:10:15.05:356,15,0	1/1:4,5:9:3.01:71,3,0
chr10	23120601	.	AT	A	204.41	PASS	AB=0.702;AC=4;AF=0.071;AN=56;BaseQRankSum=5.844;DP=295;FS=6.725;HRun=1;HaplotypeScore=52.6258;InbreedingCoeff=-0.0479;MQ=64.92;MQ0=1;MQRankSum=-5.217;QD=5.24;ReadPosRankSum=1.377;VQSLOD=0.4113;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:15,1:16:4.36:0,4,567	0/0:1,0:1:1.25:0,1,3	0/0:3,0:3:9.01:0,9,90	0/0:7,0:4:4.48:0,4,101	0/0:10,0:10:27.08:0,27,377	0/0:16,0:16:48.15:0,48,707	0/0:7,0:7:21.05:0,21,296	0/0:43,0:42:99:0,126,1692	0/0:7,0:7:21.04:0,21,270	0/0:15,0:15:42.14:0,42,618	0/0:16,0:16:45.12:0,45,603	0/0:7,0:7:21.06:0,21,300	0/0:19,0:19:57.17:0,57,815	0/0:6,0:6:18.04:0,18,246	0/0:8,0:8:24.05:0,24,304	0/0:8,0:8:24.08:0,24,356	0/1:2,1:3:9.20:9,0,37	0/1:1,1:2:10.77:11,0,38	0/1:11,6:17:99:160,0,201	0/1:8,9:17:94.82:127,0,95	0/0:1,0:1:3.01:0,3,43	0/0:1,0:1:3.01:0,3,44	0/0:3,0:3:9.02:0,9,116	0/0:5,0:5:15.05:0,15,228	0/0:19,0:19:57.10:0,57,815	0/0:13,0:13:38.68:0,39,457	0/0:18,0:18:48.11:0,48,600	0/0:7,0:7:9.02:0,9,121
chr10	23120877	.	TTGCTATTCTAGAATATTTGAACTGAGA	T	4396.76	PASS	AC=10;AF=0.185;AN=54;BaseQRankSum=6.718;DP=548;FS=8.692;HRun=0;HaplotypeScore=352.8337;InbreedingCoeff=0.9536;MQ=83.03;MQ0=0;MQRankSum=-6.399;QD=115.70;ReadPosRankSum=1.548;VQSLOD=3.4423;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:93.32:0,93,10818	1/1:0,5:5:15.05:1094,15,0	0/0:16,0:16:45.15:0,45,3519	0/0:17,0:17:48.16:0,48,3374	0/0:17,0:17:51.16:0,51,5468	0/0:29,0:29:81.28:0,81,9830	0/0:18,0:18:51.17:0,51,4893	0/0:26,0:26:78.27:0,78,5307	0/0:19,0:19:51.18:0,51,5946	0/0:30,0:30:90.31:0,90,10745	0/0:15,0:15:42.14:0,42,5003	0/0:33,0:33:90.30:0,90,9778	0/0:31,0:31:84.29:0,84,8594	0/0:29,0:29:66.21:0,66,6084	0/0:30,0:30:84.29:0,84,7880	0/0:28,0:28:81.26:0,81,8354	./.	1/1:0,3:3:6.02:438,6,0	1/1:9,6:15:21.07:1365,21,0	1/1:4,6:10:18.06:1313,18,0	1/1:4,1:5:9:187,9,0	0/0:12,0:12:36.12:0,36,4511	0/0:13,0:13:36.12:0,36,4281	0/0:14,0:14:33.11:0,33,3188	0/0:31,0:31:72.25:0,72,7671	0/0:18,0:18:51.18:0,51,5671	0/0:36,0:36:99:0,99,10689	0/0:11,0:11:30.10:0,30,3526
chr10	23120950	.	G	GGTT	4372.32	PASS	AB=0.574;AC=29;AF=0.518;AN=56;BaseQRankSum=10.288;DP=646;FS=6.313;HRun=0;HaplotypeScore=168.4923;InbreedingCoeff=-0.5697;MQ=71.26;MQ0=1;MQRankSum=0.248;QD=7.07;ReadPosRankSum=10.031;VQSLOD=2.0780;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:8,0:37:45.79:125,0,46	0/1:4,0:8:8.73:9,0,55	0/0:16,0:16:32.93:0,33,323	0/0:10,0:10:21.10:0,21,213	0/1:3,0:24:19.10:232,0,19	0/1:6,0:34:26.96:187,0,27	0/1:6,0:17:40.51:41,0,92	0/1:13,0:40:99:192,0,219	0/1:5,0:17:57.41:138,0,57	0/1:6,0:30:38.11:237,0,38	0/1:5,0:34:19.59:391,0,20	0/1:6,0:23:86.41:112,0,86	0/1:7,0:24:85.70:86,0,87	0/1:8,0:30:1.97:163,0,2	0/1:8,0:33:47.92:568,0,48	0/1:8,1:20:82.80:283,0,83	1/1:1,0:17:28.35:112,28,0	0/1:1,0:6:6.37:8,0,6	0/1:5,0:22:45.34:130,0,45	0/1:6,0:26:13.55:117,0,14	0/1:3,0:9:15.36:15,0,26	0/1:5,0:20:65.92:66,0,119	0/1:4,0:23:58.18:165,0,58	0/1:2,0:13:9.59:39,0,10	1/1:2,0:28:28.42:261,28,0	0/1:8,0:32:3.46:361,0,3	0/1:11,0:42:80.42:298,0,80	1/1:0,0:7:6.21:35,6,0
chr10	23121876	.	CTCT	C	15101.13	PASS	AB=0.938;AC=27;AF=0.482;AN=56;BaseQRankSum=19.028;DP=783;FS=1.528;HRun=0;HaplotypeScore=115.3646;InbreedingCoeff=0.9187;MQ=75.56;MQ0=0;MQRankSum=-4.025;QD=37.19;ReadPosRankSum=3.786;VQSLOD=5.6018;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,138,3062	0/0:7,0:7:21.07:0,21,437	0/0:25,0:25:69.10:0,69,1463	0/0:22,0:22:57.19:0,57,1213	1/1:0,22:22:60.16:918,60,0	1/1:0,28:28:57.19:915,57,0	1/1:2,22:24:54.18:881,54,0	0/0:37,0:37:99:0,105,2196	1/1:4,31:35:84.29:1371,84,0	1/1:0,29:29:84.28:1340,84,0	1/1:0,33:33:87.30:1420,87,0	1/1:3,25:28:78.27:1273,78,0	1/1:3,41:44:99:1636,102,0	1/1:0,37:37:96.33:1566,96,0	0/0:50,0:50:99:0,148,3246	0/0:40,0:40:99:0,117,2596	0/0:22,0:22:54.14:0,54,1160	0/0:4,0:4:9.03:0,9,201	0/0:28,0:28:75.23:0,75,1579	0/0:26,0:26:78.27:0,78,1672	0/0:26,0:26:78.27:0,78,1724	1/1:2,19:21:51.17:832,51,0	1/1:1,20:21:48.16:782,48,0	1/1:1,21:22:51.17:831,51,0	1/1:3,29:32:81.28:1322,81,0	0/1:28,2:30:13.67:14,0,1604	0/0:40,0:39:99:0,114,2404	0/0:4,0:4:12.04:0,12,268
chr10	23122048	.	C	CGTATGTAT	10310.31	PASS	AB=0.801;AC=34;AF=0.680;AN=50;BaseQRankSum=-11.377;DP=753;FS=1.807;HRun=0;HaplotypeScore=223.3134;InbreedingCoeff=0.5678;MQ=63.94;MQ0=3;MQRankSum=-5.608;QD=20.62;ReadPosRankSum=-5.434;VQSLOD=3.1029;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:28:17.93:140,18,0	1/1:7,0:7:3.01:111,3,0	./.	./.	0/1:17,0:39:23.25:339,0,23	1/1:15,6:23:18.05:633,18,0	0/1:18,1:22:0:0,0,0	0/0:31,0:38:3.52:0,4,21	1/1:14,9:28:24.07:876,24,0	1/1:29,6:35:41.95:1276,42,0	1/1:13,3:23:3.01:122,3,0	0/1:14,2:23:62.07:351,0,62	1/1:18,12:40:33.10:1240,33,0	1/1:29,5:41:15.05:602,15,0	0/0:15,0:40:60.20:0,60,1077	0/0:10,0:24:40.52:0,41,689	0/1:26,0:26:20.69:248,0,21	1/1:14,0:14:11.48:183,11,0	1/1:19,0:19:18.06:528,18,0	1/1:21,0:21:24.08:893,24,0	./.	1/1:18,7:28:21.05:754,21,0	1/1:17,9:31:18.06:730,18,0	1/1:17,0:17:2.92:42,3,0	1/1:12,13:35:33.10:1241,33,0	0/0:11,0:32:57.50:0,57,1005	0/0:18,0:35:54.18:0,54,965	0/0:6,0:17:23.56:0,24,397
chr10	23122051	.	A	ATGTATGTG	8961.90	PASS	AB=1.000;AC=21;AF=0.389;AN=54;BaseQRankSum=-7.956;DP=746;FS=4.184;HRun=0;HaplotypeScore=226.9751;InbreedingCoeff=0.0624;MQ=62.41;MQ0=6;MQRankSum=-7.835;QD=20.37;ReadPosRankSum=2.791;VQSLOD=4.0870;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:7.58:0,8,277	1/1:0,7:10:5.93:146,6,0	0/0:22,0:17:33.01:0,33,344	0/0:17,0:14:29.98:0,30,292	0/1:35,0:35:99:138,0,245	0/1:23,0:23:99:487,0,172	0/0:18,0:18:14.50:0,14,105	0/0:35,0:34:79.15:0,79,693	0/1:28,0:28:99:691,0,165	0/1:34,0:34:99:913,0,344	0/1:24,0:24:86.66:87,0,107	0/1:25,0:25:99:271,0,268	0/1:39,0:39:99:994,0,209	0/1:38,0:38:99:471,0,204	0/0:38,0:37:90.16:0,90,1453	0/0:24,0:24:60.12:0,60,959	1/1:25,0:25:8.39:470,8,0	1/1:4,11:18:11.12:219,11,0	1/1:18,3:19:42.06:879,42,0	1/1:2,20:27:24.08:1032,24,0	./.	0/1:29,0:29:99:591,0,198	0/1:31,0:31:99:577,0,223	0/0:17,0:17:0.02:0,0,103	0/1:33,0:33:99:994,0,142	0/0:30,0:30:81.08:0,81,1348	0/0:34,0:34:93.13:0,93,1424	0/0:17,0:17:39.05:0,39,583
chr10	23122239	.	GTGT	G	652.37	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=-7.061;DP=660;FS=8.616;HRun=0;HaplotypeScore=154.1816;InbreedingCoeff=0.3452;MQ=67.25;MQ0=5;MQRankSum=-3.087;QD=7.01;ReadPosRankSum=-5.100;VQSLOD=0.3365;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:2,21:22:42.14:735,42,0	0/0:14,0:14:30.83:0,31,109	0/0:23,0:22:62.22:0,62,1110	0/0:19,0:18:47.29:0,47,915	0/1:26,0:26:11.86:12,0,404	0/0:19,0:19:53.76:0,54,442	0/0:24,0:24:33.77:0,34,400	0/0:23,0:22:62.65:0,63,497	0/0:22,0:21:33.89:0,34,419	0/0:34,0:34:38.09:0,38,605	0/0:28,0:28:77.62:0,78,625	0/0:25,0:25:71.46:0,71,517	0/0:22,0:22:59.62:0,60,452	0/0:19,0:18:50.66:0,51,367	0/0:22,0:22:33.83:0,34,408	0/0:21,0:20:59.65:0,60,433	0/0:38,0:38:73.36:0,73,374	0/0:29,0:29:47.43:0,47,166	0/0:31,0:31:68.74:0,69,293	0/0:39,0:39:77.13:0,77,299	0/0:16,0:16:28.46:0,28,100	0/1:24,0:24:15.41:15,0,382	0/1:20,0:19:6.88:7,0,305	0/0:15,0:15:9.91:0,10,254	0/0:25,0:25:33.90:0,34,462	0/0:24,0:24:9.97:0,10,400	0/0:27,0:26:71.57:0,72,538	0/0:8,0:8:14.91:0,15,107
chr10	23122241	.	GT	G	10945.55	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-0.554;DP=652;FS=2.802;HRun=8;HaplotypeScore=92.2265;InbreedingCoeff=0.9831;MQ=68.09;MQ0=5;MQRankSum=-6.369;QD=18.00;ReadPosRankSum=7.871;VQSLOD=4.4267;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:21:39.94:199,40,0	1/1:0,0:13:26.48:77,26,0	0/0:24,0:23:60.09:0,60,663	0/0:20,0:19:50.53:0,51,547	1/1:2,23:25:69.11:666,69,0	1/1:3,16:19:45.06:435,45,0	1/1:1,23:24:63.10:608,63,0	1/1:4,20:23:22.17:481,22,0	1/1:4,18:21:47.75:487,48,0	1/1:1,30:31:90.14:868,90,0	1/1:3,25:28:66.10:637,66,0	1/1:2,23:25:66.10:637,66,0	1/1:4,18:22:48.07:463,48,0	1/1:2,15:16:42.07:406,42,0	1/1:2,20:22:57.09:550,57,0	1/1:1,20:20:60.10:579,60,0	1/1:6,0:37:44.02:127,44,0	1/1:1,0:28:40.74:118,41,0	1/1:3,0:30:16.78:85,17,0	1/1:2,0:38:61.10:178,61,0	1/1:0,0:17:24.44:71,24,0	1/1:4,21:26:59.12:556,59,0	1/1:2,18:19:45.07:434,45,0	1/1:2,13:15:33.05:318,33,0	1/1:3,22:25:54.08:521,54,0	1/1:1,24:25:72.10:689,72,0	1/1:4,23:26:63.10:608,63,0	1/1:0,5:5:15.02:145,15,0
chr10	23123023	.	AATTTGTTTTT	A	4710.58	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=3.039;DP=529;FS=0.000;HRun=0;HaplotypeScore=176.4794;InbreedingCoeff=0.9697;MQ=68.35;MQ0=8;MQRankSum=-8.564;QD=70.31;ReadPosRankSum=1.859;VQSLOD=4.7719;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:26:57.20:0,57,2193	1/1:0,7:7:21.07:672,21,0	0/0:24,0:13:24.10:0,24,482	0/0:13,0:10:14.85:0,15,155	0/0:26,0:26:66.42:0,66,1891	0/0:18,0:18:54.19:0,54,1852	0/0:19,0:18:51.16:0,51,1641	0/0:29,0:28:81.26:0,81,2857	0/0:17,0:17:48.16:0,48,1618	0/0:33,0:29:84.26:0,84,2600	0/0:20,0:20:60.17:0,60,1848	0/0:21,0:21:54.18:0,54,1714	0/0:26,0:25:63.21:0,63,1959	0/0:13,0:13:33.08:0,33,942	0/0:28,0:28:69.24:0,69,2262	0/0:25,0:25:69.21:0,69,2381	1/1:0,9:8:9.03:223,9,0	1/1:0,7:8:18.06:595,18,0	1/1:0,18:18:51.17:1514,51,0	1/1:0,20:20:51.06:1437,51,0	1/1:0,5:5:9.03:270,9,0	0/0:14,0:14:42.13:0,42,1303	0/0:17,0:17:45.15:0,45,1561	0/0:20,0:20:60.18:0,60,1878	0/0:23,0:23:66.21:0,66,2135	0/0:20,0:20:60.16:0,60,2142	0/0:15,0:14:42.03:0,42,1403	0/0:13,0:12:36.12:0,36,1644
chr10	23123026	.	TTG	T	1642.79	PASS	AB=0.970;AC=26;AF=0.464;AN=56;BaseQRankSum=8.112;DP=518;FS=54.529;HRun=0;HaplotypeScore=105.6810;InbreedingCoeff=-0.0353;MQ=66.21;MQ0=9;MQRankSum=-4.355;QD=4.83;ReadPosRankSum=6.547;VQSLOD=0.3833;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:32.80:0,33,462	1/1:7,0:7:20.71:136,21,0	0/0:26,0:13:18.42:0,18,169	0/1:15,0:8:6.75:7,0,25	0/1:22,3:25:99:105,0,162	0/1:18,0:18:23.11:82,0,23	0/1:19,0:18:25.18:25,0,93	0/0:30,0:29:63.36:0,63,619	0/1:17,0:17:24.82:25,0,104	0/1:29,2:27:66.99:67,0,172	0/1:17,0:17:60.02:66,0,60	0/1:19,2:21:43.71:114,0,44	0/1:26,0:25:76.40:81,0,76	0/1:10,1:11:22.95:108,0,23	0/0:27,0:27:27.89:0,28,356	0/0:22,1:23:4.29:0,4,242	1/1:9,0:8:8.60:50,9,0	1/1:8,0:8:17.82:123,18,0	1/1:18,0:18:47.43:320,47,0	1/1:20,0:20:44.44:295,44,0	1/1:5,0:5:8.61:51,9,0	0/1:14,0:14:14.46:14,0,106	0/1:17,0:17:25.12:25,0,35	0/1:19,0:19:40.73:54,0,41	0/1:21,2:23:79.55:80,0,124	0/0:15,0:15:44.99:0,45,544	0/0:13,0:11:18.85:0,19,277	0/0:15,0:14:10.87:0,11,409
chr10	23123028	.	GTT	G	4391.98	PASS	AB=0.722;AC=41;AF=0.732;AN=56;BaseQRankSum=-0.156;DP=520;FS=10.699;HRun=15;HaplotypeScore=98.3710;InbreedingCoeff=0.6435;MQ=64.18;MQ0=9;MQRankSum=-1.968;QD=11.32;ReadPosRankSum=3.715;VQSLOD=3.0571;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:30:50.92:0,51,456	1/1:7,0:7:16.01:65,16,0	0/0:26,0:12:8.50:0,9,73	0/0:14,0:7:3.46:0,3,24	1/1:12,9:25:31.82:284,32,0	1/1:5,13:18:43.79:362,44,0	1/1:7,12:19:32.67:275,33,0	0/0:26,1:29:23.13:0,23,462	1/1:6,9:17:23.53:240,24,0	1/1:14,16:27:10.11:344,10,0	1/1:3,13:17:29.45:294,29,0	1/1:6,12:21:32.28:305,32,0	1/1:6,17:23:44.56:379,45,0	1/1:2,8:10:20.97:183,21,0	0/1:13,3:27:58.67:59,0,69	0/1:10,1:24:15.52:16,0,100	1/1:9,0:8:4.35:18,4,0	1/1:8,0:8:16.43:73,16,0	1/1:18,0:18:34.47:157,34,0	1/1:20,0:20:36.42:171,36,0	1/1:5,0:5:0.67:4,1,0	1/1:4,8:14:20.30:156,20,0	1/1:2,13:17:38.68:329,39,0	1/1:4,13:19:41.40:340,41,0	1/1:11,12:23:16.91:339,17,0	0/0:15,0:16:38.54:0,39,459	0/1:12,1:12:0.23:0,0,215	0/0:14,1:14:3.32:0,3,319
chr10	23123150	.	T	TA	2607.70	PASS	AC=12;AF=0.222;AN=54;BaseQRankSum=-8.984;DP=461;FS=6.968;HRun=6;HaplotypeScore=46.1722;InbreedingCoeff=0.9933;MQ=65.47;MQ0=0;MQRankSum=-2.832;QD=25.57;ReadPosRankSum=-0.113;VQSLOD=3.0219;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:84.06:0,84,820	1/1:3,12:15:33.11:415,33,0	0/0:11,0:9:23.86:0,24,218	0/0:5,0:5:14.57:0,15,113	0/0:27,0:27:66.12:0,66,665	0/0:17,0:17:48.08:0,48,481	0/0:16,0:16:48.05:0,48,470	0/0:16,0:16:39.06:0,39,388	0/0:12,0:12:24.05:0,24,245	0/0:26,0:26:72.15:0,72,726	0/0:13,0:13:27.06:0,27,275	0/0:14,0:14:42.10:0,42,428	0/0:19,0:19:57.13:0,57,581	0/0:15,0:15:42.06:0,42,418	0/0:16,0:16:45.09:0,45,452	0/0:20,0:20:51.10:0,51,514	1/1:0,19:19:54.17:679,54,0	1/1:4,12:16:30.03:357,30,0	1/1:2,21:23:60.17:737,60,0	1/1:7,11:18:30.10:378,30,0	1/1:2,9:11:18.06:226,18,0	0/0:21,0:21:60.13:0,60,608	0/0:10,0:10:30.05:0,30,298	0/0:13,0:13:39.09:0,39,398	0/0:23,0:23:60.12:0,60,605	0/0:17,0:17:45.09:0,45,455	0/0:20,0:20:54.12:0,54,551	./.
chr10	23123298	.	ATCTAACAAAAG	A	3770.02	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=9.743;DP=562;FS=7.747;HRun=0;HaplotypeScore=173.5218;InbreedingCoeff=0.9632;MQ=80.00;MQ0=0;MQRankSum=-8.870;QD=58.91;ReadPosRankSum=1.986;VQSLOD=3.0620;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:93.28:0,93,4621	1/1:1,4:4:6.02:218,6,0	0/0:15,0:15:42.13:0,42,1751	0/0:14,0:14:39.13:0,39,1978	0/0:34,0:34:96.33:0,96,5018	0/0:39,0:39:99:0,114,6245	0/0:13,0:13:39.13:0,39,1996	0/0:34,0:34:99:0,100,5158	0/0:19,0:19:54.19:0,54,2846	0/0:34,0:33:99:0,99,5620	0/0:10,0:10:30.10:0,30,1652	0/0:19,0:19:57.20:0,57,3228	0/0:23,0:23:69.24:0,69,3546	0/0:20,0:20:57.18:0,57,3172	0/0:31,0:31:93.32:0,93,5035	0/0:40,0:40:99:0,117,5933	1/1:1,8:9:15.05:544,15,0	1/1:7,7:14:15.05:544,15,0	1/1:0,14:14:42.14:1416,42,0	1/1:1,8:9:18.06:635,18,0	1/1:3,10:13:12.04:415,12,0	0/0:21,0:21:63.22:0,63,3432	0/0:11,0:11:33.11:0,33,1820	0/0:9,0:9:27.09:0,27,1472	0/0:24,0:24:72.23:0,72,3893	0/0:19,0:19:57.20:0,57,2913	0/0:28,0:28:84.29:0,84,4660	0/0:10,0:10:30.10:0,30,1705
chr10	23123818	.	A	AGCACACACACAC	4743.94	PASS	AB=0.946;AC=29;AF=0.518;AN=56;BaseQRankSum=5.469;DP=537;FS=44.040;HRun=0;HaplotypeScore=195.1309;InbreedingCoeff=-0.2448;MQ=65.48;MQ0=4;MQRankSum=-6.873;QD=11.92;ReadPosRankSum=-5.520;VQSLOD=0.4427;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:43:77.20:0,77,654	1/1:5,0:5:5.67:199,6,0	0/0:32,0:23:65.99:0,66,636	0/0:28,0:20:53.95:0,54,515	0/1:35,0:35:99:282,0,312	0/1:15,0:12:26.69:27,0,135	0/0:20,0:19:33.07:0,33,265	0/1:24,0:24:38.21:38,0,428	0/1:18,0:15:39.99:40,0,153	0/1:17,0:15:99:337,0,167	0/1:17,0:18:99:212,0,194	0/1:24,0:23:99:223,0,231	0/1:20,0:18:99:400,0,191	0/1:16,0:16:99:116,0,190	0/0:9,0:15:20.78:0,21,161	0/1:15,0:27:3.03:3,0,323	1/1:5,7:14:12.04:489,12,0	1/1:1,0:13:5.89:140,6,0	1/1:9,0:10:25.53:278,26,0	1/1:5,6:12:3.01:188,3,0	1/1:10,0:10:12.23:93,12,0	0/1:18,0:19:94.85:304,0,95	0/1:17,0:17:9.17:9,0,185	0/1:22,0:20:19.59:20,0,123	0/1:11,0:12:74.89:141,0,75	0/1:16,0:15:99:407,0,185	0/1:22,0:24:99:517,0,279	0/1:5,0:8:66.90:281,0,67
chr10	23124169	.	ACT	A	3514.11	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=9.439;DP=567;FS=0.926;HRun=0;HaplotypeScore=69.4981;InbreedingCoeff=0.9938;MQ=96.90;MQ0=0;MQRankSum=-3.207;QD=39.48;ReadPosRankSum=1.214;VQSLOD=5.6685;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:78.27:0,78,1460	1/1:0,5:5:15.05:221,15,0	0/0:29,0:29:85.83:0,86,1505	0/0:28,0:28:78.23:0,78,1319	0/0:20,0:20:57.18:0,57,1034	0/0:19,0:19:54.17:0,54,979	0/0:18,0:18:54.19:0,54,1012	0/0:28,0:28:78.26:0,78,1430	0/0:20,0:20:60.21:0,60,1124	0/0:11,0:11:33.11:0,33,618	0/0:13,0:13:27.07:0,27,472	0/0:24,0:24:72.25:0,72,1341	0/0:32,0:32:93.32:0,93,1740	0/0:18,0:18:54.19:0,54,1002	0/0:28,0:28:84.27:0,84,1541	0/0:22,0:22:63.20:0,63,1148	1/1:0,19:19:51.17:751,51,0	1/1:0,6:6:18.06:265,18,0	1/1:1,26:27:78.25:1130,78,0	1/1:0,10:10:30.10:441,30,0	1/1:2,20:22:48.16:707,48,0	0/0:18,0:18:51.17:0,51,953	0/0:12,0:12:30.07:0,30,494	0/0:34,0:34:99:0,102,1873	0/0:20,0:20:48.16:0,48,898	0/0:18,0:18:54.18:0,54,967	0/0:32,0:32:87.23:0,87,1529	0/0:7,0:7:21.07:0,21,393
chr10	23124510	.	T	TACACACACACACACAC	10805.30	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-5.091;DP=609;FS=0.954;HRun=0;HaplotypeScore=220.8137;InbreedingCoeff=0.4799;MQ=52.06;MQ0=9;MQRankSum=-2.256;QD=21.83;ReadPosRankSum=0.408;VQSLOD=3.6278;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:23:22.25:639,22,0	1/1:11,0:11:3.90:83,4,0	0/0:28,0:15:9.91:0,10,179	0/0:35,0:15:6.90:0,7,70	1/1:15,2:19:2.60:226,3,0	1/1:15,2:23:3.01:227,3,0	1/1:19,0:19:6:163,6,0	1/1:28,0:26:33.43:868,33,0	1/1:21,0:21:15.51:336,16,0	1/1:16,0:15:33.08:1074,33,0	1/1:11,4:21:6.02:395,6,0	1/1:11,3:31:6.02:454,6,0	1/1:17,0:17:16.74:559,17,0	1/1:6,3:14:6.02:454,6,0	0/0:10,0:26:19.07:0,19,228	0/0:9,0:24:2.63:0,3,277	1/1:16,0:16:12.04:422,12,0	1/1:8,0:7:18.06:509,18,0	1/1:19,0:17:18.03:562,18,0	1/1:8,0:16:6.02:257,6,0	1/1:19,0:19:2.99:23,3,0	1/1:18,0:17:3.01:94,3,0	1/1:22,0:22:4.58:196,5,0	1/1:19,0:25:2.62:168,3,0	1/1:13,7:28:12.04:908,12,0	1/1:31,0:28:38.53:1736,39,0	1/1:10,5:30:3.01:227,3,0	1/1:7,1:9:3.01:227,3,0
chr10	23125322	.	CTTTCTTT	C	3423.81	PASS	AB=0.967;AC=32;AF=0.593;AN=54;BaseQRankSum=-6.554;DP=335;FS=1.708;HRun=0;HaplotypeScore=99.9437;InbreedingCoeff=-0.1909;MQ=49.22;MQ0=11;MQRankSum=-3.241;QD=12.82;ReadPosRankSum=0.233;VQSLOD=2.4588;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:0.33:0,0,124	1/1:0,3:3:6.02:104,6,0	0/0:16,0:3:4.56:0,5,37	./.	0/1:20,0:20:99:115,0,539	0/1:10,0:10:92.23:92,0,208	1/1:5,0:5:7.34:110,7,0	0/0:9,0:9:5.10:0,5,58	0/1:5,0:5:41.91:115,0,42	0/1:23,0:23:99:348,0,218	0/1:31,0:31:99:316,0,382	0/1:10,0:10:85.04:85,0,157	0/1:19,0:19:14.84:281,0,15	0/1:9,0:9:99:128,0,162	1/1:13,0:13:18.03:253,18,0	1/1:9,0:9:8.02:87,8,0	0/0:13,0:13:3.74:0,4,76	0/1:2,12:14:26.52:65,0,27	1/1:9,0:6:15.05:248,15,0	1/1:0,12:12:11.97:209,12,0	1/1:4,0:4:6.02:87,6,0	1/1:2,0:2:5.92:41,6,0	0/1:13,0:13:97.75:98,0,218	0/1:9,0:9:60.47:60,0,214	0/1:17,0:17:99:117,0,282	0/1:12,0:12:3.44:54,0,3	1/1:14,0:14:22.44:408,22,0	0/1:4,0:4:0.23:3,0,0
chr10	23125326	.	CTTT	C	4081.41	PASS	AB=1.000;AC=40;AF=0.714;AN=56;BaseQRankSum=-6.286;DP=326;FS=0.000;HRun=6;HaplotypeScore=75.7982;InbreedingCoeff=0.0132;MQ=50.50;MQ0=10;MQRankSum=-1.691;QD=13.98;ReadPosRankSum=-1.766;VQSLOD=-0.7434;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,14:15:24.08:379,24,0	1/1:3,0:3:6.01:59,6,0	0/0:15,0:3:4.56:0,5,37	0/0:13,0:2:0:0,0,0	0/1:22,0:22:20.25:280,0,20	0/1:10,0:10:13.52:95,0,14	1/1:6,0:6:15.02:172,15,0	0/0:6,0:6:5.10:0,5,58	1/1:5,0:5:6.42:122,6,0	1/1:21,0:21:27.08:431,27,0	0/1:31,0:31:7.03:494,0,7	0/1:10,0:10:5.83:130,0,6	1/1:18,0:18:41.74:456,42,0	0/1:9,0:9:16:129,0,16	1/1:13,0:13:13.06:91,13,0	1/1:9,0:9:7.23:52,7,0	1/1:1,11:13:14.89:181,15,0	1/1:14,0:14:7.56:59,8,0	1/1:9,0:6:15.04:201,15,0	1/1:12,0:12:11.96:118,12,0	1/1:3,0:3:6.02:87,6,0	1/1:2,0:2:5.92:41,6,0	0/1:14,0:14:20.83:120,0,21	0/1:11,0:11:20.16:63,0,20	0/1:15,0:15:26.07:136,0,26	0/1:10,0:10:3.95:26,0,4	1/1:13,0:13:21.10:157,21,0	0/1:4,0:4:0.23:3,0,0
chr10	23125329	.	T	TC	6457.61	PASS	AB=0.955;AC=46;AF=0.821;AN=56;BaseQRankSum=-6.135;DP=324;FS=36.882;HRun=0;HaplotypeScore=58.3428;InbreedingCoeff=0.4788;MQ=48.86;MQ0=10;MQRankSum=3.955;QD=23.06;ReadPosRankSum=2.171;VQSLOD=3.1527;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:14:13.08:71,13,0	1/1:3,0:3:3.01:31,3,0	0/0:12,0:2:4.56:0,5,37	0/0:12,0:1:0:0,0,0	1/1:2,20:22:66.05:852,66,0	1/1:0,10:10:27.09:388,27,0	1/1:1,6:7:15.04:180,15,0	0/0:7,0:7:6.73:0,7,83	1/1:2,3:5:15.04:180,15,0	1/1:11,10:21:60.08:665,60,0	1/1:10,21:31:80.19:1024,80,0	1/1:3,8:11:24.06:299,24,0	1/1:4,13:17:51.14:615,51,0	1/1:2,8:10:21.06:282,21,0	0/1:13,0:13:18.36:18,0,18	1/1:9,0:9:6.89:55,7,0	1/1:12,1:13:9.65:70,10,0	1/1:13,1:14:8.60:80,9,0	1/1:4,6:6:15.05:226,15,0	1/1:12,0:12:6.84:64,7,0	1/1:0,3:3:6.02:90,6,0	1/1:2,0:2:5.92:41,6,0	1/1:5,8:13:27.08:352,27,0	1/1:0,11:11:21.94:278,22,0	1/1:3,12:15:42.11:566,42,0	0/1:9,1:10:7.61:25,0,8	0/0:13,0:13:21.35:0,21,67	1/1:4,0:4:0.90:6,1,0
chr10	23125427	.	GA	G	277.45	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.371;DP=431;FS=9.227;HRun=3;HaplotypeScore=48.4658;InbreedingCoeff=0.8833;MQ=68.36;MQ0=0;MQRankSum=0.071;QD=27.75;ReadPosRankSum=0.913;VQSLOD=1.9595;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,10:10:30.09:372,30,0	0/0:8,0:8:24.08:0,24,337	0/0:8,0:8:8.95:0,9,182	0/0:7,0:7:21.04:0,21,273	0/0:29,0:29:87.24:0,87,1203	0/0:12,0:12:33.11:0,33,474	0/0:12,0:12:36.12:0,36,517	0/0:22,0:22:63.21:0,63,905	0/0:10,0:10:30.08:0,30,413	0/0:14,0:14:39.13:0,39,556	0/0:22,0:22:66.13:0,66,895	0/0:11,0:11:30.10:0,30,430	0/0:22,0:22:66.20:0,66,914	0/0:23,0:23:63.21:0,63,906	0/0:17,0:17:48.16:0,48,691	0/0:17,0:17:51.17:0,51,733	0/0:14,0:14:42.14:0,42,597	0/0:9,0:9:27.09:0,27,384	0/0:20,0:20:57.18:0,57,806	0/0:26,0:26:75.25:0,75,1078	0/0:9,0:9:27.07:0,27,369	0/0:7,0:7:21.07:0,21,302	0/0:11,0:11:33.09:0,33,439	0/0:4,0:4:9.03:0,9,130	0/0:23,0:23:69.23:0,69,993	0/0:25,0:25:69.23:0,69,984	0/0:27,0:26:81.27:0,81,1163	0/0:12,0:12:36.12:0,36,518
chr10	23125558	.	CAT	C	2897.66	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=11.394;DP=551;FS=34.370;HRun=0;HaplotypeScore=70.7148;InbreedingCoeff=0.9837;MQ=82.96;MQ0=0;MQRankSum=-4.524;QD=41.40;ReadPosRankSum=2.765;VQSLOD=2.2264;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:66.23:0,66,1339	1/1:0,6:6:12.04:195,12,0	0/0:13,0:13:39.13:0,39,780	0/0:21,0:21:63.11:0,63,1106	0/0:25,0:25:75.26:0,75,1513	0/0:27,0:27:81.28:0,81,1617	0/0:16,0:16:48.16:0,48,975	0/0:34,0:34:99:0,102,1969	0/0:16,0:16:48.16:0,48,974	0/0:27,0:27:81.22:0,81,1561	0/0:32,0:32:96.33:0,96,1925	0/0:13,0:13:39.10:0,39,719	0/0:31,0:31:93.30:0,93,1846	0/0:27,0:27:81.26:0,81,1608	0/0:21,0:21:57.20:0,57,1146	0/0:21,0:21:63.22:0,63,1280	1/1:0,11:11:30.10:487,30,0	1/1:0,4:4:12.04:189,12,0	1/1:0,25:25:72.22:1143,72,0	1/1:0,14:14:39.13:631,39,0	1/1:0,10:10:27.09:437,27,0	0/0:10,0:10:30.10:0,30,609	0/0:16,0:16:48.16:0,48,964	0/0:12,0:12:36.11:0,36,682	0/0:35,0:35:99:0,105,2086	0/0:25,0:25:75.24:0,75,1486	0/0:32,0:32:96.32:0,96,1899	0/0:5,0:5:15.05:0,15,304
chr10	23125886	.	TG	T	2353.82	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=12.314;DP=639;FS=0.410;HRun=1;HaplotypeScore=114.7946;InbreedingCoeff=0.9929;MQ=76.76;MQ0=0;MQRankSum=-4.253;QD=23.54;ReadPosRankSum=1.085;VQSLOD=3.6421;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:71.17:0,71,580	1/1:0,11:11:27.02:260,27,0	0/0:21,0:21:57.76:0,58,780	0/0:9,0:9:14.55:0,15,151	0/0:29,0:29:75.16:0,75,618	0/0:33,0:33:94.44:0,94,743	0/0:15,0:15:41.87:0,42,391	0/0:32,0:32:93.29:0,93,1419	0/0:24,0:24:66.19:0,66,544	0/0:27,0:27:81.06:0,81,820	0/0:20,0:20:53.01:0,53,445	0/0:20,0:20:50.73:0,51,425	0/0:41,0:41:99:0,110,918	0/0:37,0:37:99:0,104,827	0/0:30,0:30:90.29:0,90,1411	0/0:25,0:25:75.24:0,75,1173	1/1:0,24:24:72:659,72,0	1/1:0,13:13:34.91:327,35,0	1/1:3,16:19:53.98:488,54,0	1/1:3,17:20:54.75:489,55,0	1/1:1,12:13:35.99:319,36,0	0/0:27,0:27:75.71:0,76,603	0/0:19,0:19:45.66:0,46,367	0/0:12,0:12:35.76:0,36,263	0/0:29,0:29:83.29:0,83,704	0/0:24,0:24:72.22:0,72,1120	0/0:35,0:33:99:0,102,1589	0/0:5,0:5:15.05:0,15,240
chr10	23125888	.	AT	A	10345.97	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=13.723;DP=646;FS=0.000;HRun=9;HaplotypeScore=86.9939;InbreedingCoeff=0.9796;MQ=77.81;MQ0=0;MQRankSum=-4.767;QD=22.30;ReadPosRankSum=3.662;VQSLOD=5.3176;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,21:24:28.82:515,29,0	1/1:11,0:11:29.96:262,30,0	0/0:23,0:23:56.37:0,56,597	0/0:9,0:9:9:0,9,82	1/1:5,26:31:59.99:549,60,0	1/1:2,30:32:87.05:796,87,0	1/1:3,12:15:33.01:302,33,0	0/0:32,0:32:75.21:0,75,857	1/1:3,22:25:63.03:577,63,0	1/1:3,25:28:72:650,72,0	1/1:3,17:20:13.41:377,13,0	1/1:2,19:21:45.02:412,45,0	1/1:5,37:42:96.04:879,96,0	1/1:2,35:37:99:906,99,0	0/0:30,0:30:84.23:0,84,950	0/0:24,0:24:66.18:0,66,753	1/1:25,0:25:72.50:651,73,0	1/1:13,0:13:36.01:326,36,0	1/1:19,0:19:53.87:465,54,0	1/1:20,0:20:53.88:469,54,0	1/1:14,0:14:38.98:346,39,0	1/1:4,22:27:36.45:574,36,0	1/1:6,14:20:13.54:302,14,0	1/1:0,12:12:36.02:330,36,0	1/1:3,25:28:72.02:659,72,0	0/0:23,1:24:38.72:0,39,692	0/0:35,0:33:96.23:0,96,1074	0/0:5,0:5:15.04:0,15,173
chr10	23126285	.	CG	C	4295.15	PASS	AB=0.964;AC=38;AF=0.704;AN=54;BaseQRankSum=8.443;DP=458;FS=46.554;HRun=1;HaplotypeScore=89.2331;InbreedingCoeff=-0.3161;MQ=36.90;MQ0=48;MQRankSum=-6.117;QD=9.44;ReadPosRankSum=9.651;VQSLOD=-0.3123;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:37,0:28:32.20:246,32,0	1/1:2,4:6:14.95:161,15,0	./.	0/0:3,0:2:2.04:0,2,6	1/1:23,0:23:24.86:186,25,0	1/1:18,0:15:15.70:162,16,0	0/1:20,0:19:8.97:110,0,9	0/1:27,0:25:92.01:114,0,92	0/1:11,0:11:32.88:78,0,33	0/1:18,0:17:99:118,0,148	0/1:18,0:17:5.81:144,0,6	0/1:30,1:27:96.19:155,0,96	0/1:20,0:16:21.33:114,0,21	0/1:18,0:14:36.66:66,0,37	1/1:15,0:13:6.52:125,7,0	0/1:18,0:17:43.19:84,0,43	1/1:8,18:23:63.09:772,63,0	0/1:6,6:9:70.87:185,0,71	1/1:6,9:12:33.02:409,33,0	1/1:2,16:17:30.10:408,30,0	1/1:7,2:5:9.01:93,9,0	0/1:13,1:14:4.79:80,0,5	1/1:19,0:19:3.09:103,3,0	0/1:13,1:13:30.21:30,0,79	1/1:7,0:6:14.49:83,14,0	0/1:17,0:10:26.45:97,0,26	0/1:21,0:19:38.37:146,0,38	1/1:3,0:2:5.54:25,6,0
chr10	23126286	.	GA	G	6460.44	PASS	AB=0.885;AC=49;AF=0.907;AN=54;BaseQRankSum=-4.079;DP=475;FS=20.601;HRun=8;HaplotypeScore=89.9920;InbreedingCoeff=0.1608;MQ=37.06;MQ0=49;MQRankSum=-1.426;QD=13.69;ReadPosRankSum=5.276;VQSLOD=3.1051;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:23,16:30:69.09:664,69,0	1/1:7,0:7:8.35:64,8,0	./.	0/0:3,0:2:2.74:0,3,12	1/1:8,14:22:42.04:400,42,0	1/1:5,13:15:42.06:402,42,0	1/1:9,12:20:35.67:336,36,0	1/1:13,13:24:36.04:347,36,0	1/1:8,6:14:23.83:225,24,0	0/1:8,9:16:4:254,0,4	1/1:7,11:17:32.98:301,33,0	1/1:15,15:26:49.28:457,49,0	1/1:11,9:16:26.87:260,27,0	1/1:13,5:14:18.01:174,18,0	1/1:7,9:14:30.05:288,30,0	1/1:8,10:17:24.03:231,24,0	1/1:29,0:26:14.19:331,14,0	0/1:14,0:11:73.36:73,0,83	1/1:18,0:15:25.23:184,25,0	0/1:19,0:18:20.74:181,0,21	1/1:11,0:6:2.99:25,3,0	1/1:6,8:14:17.91:163,18,0	1/1:6,12:18:26.93:260,27,0	1/1:9,5:13:8.99:82,9,0	1/1:3,5:7:15.02:143,15,0	1/1:10,7:10:21.02:202,21,0	1/1:12,11:21:21.21:355,21,0	1/1:1,2:2:6.01:58,6,0
chr10	23126299	.	CAA	C	1130.31	PASS	AB=0.821;AC=23;AF=0.411;AN=56;BaseQRankSum=-2.696;DP=510;FS=3.576;HRun=17;HaplotypeScore=116.4218;InbreedingCoeff=-0.0289;MQ=46.69;MQ0=40;MQRankSum=-5.016;QD=3.60;ReadPosRankSum=0.524;VQSLOD=-0.1054;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:33:55.76:0,56,447	0/1:4,1:6:7.22:24,0,7	0/1:10,0:4:2.27:12,0,2	0/1:17,0:9:8.57:9,0,47	0/0:22,1:25:35.91:0,36,292	0/0:19,0:17:18.95:0,19,189	0/0:16,0:18:33.89:0,34,260	1/1:15,9:24:36.43:255,36,0	0/0:11,0:11:14.93:0,15,116	0/0:24,1:24:7.39:0,7,255	0/1:15,1:17:45.91:46,0,97	0/0:26,0:26:6.74:0,7,199	0/1:19,1:16:22.34:22,0,114	0/1:19,2:18:4.61:5,0,87	1/1:9,7:15:23.16:173,23,0	1/1:10,3:12:17.39:125,17,0	0/1:13,0:21:33.05:55,0,33	0/1:9,0:13:7.99:43,0,8	0/1:14,0:20:51.38:59,0,51	0/1:8,0:12:15.18:15,0,37	0/0:5,0:4:2.50:0,2,18	0/0:19,0:19:18.22:0,18,166	0/1:18,2:21:36.39:36,0,161	0/1:10,0:9:14.65:15,0,40	0/1:11,1:11:1.84:2,0,114	0/1:9,10:16:8.65:199,0,9	1/1:11,8:17:17.57:141,18,0	0/1:4,3:8:11.72:66,0,12
chr10	23126313	.	A	AAG	4692.11	PASS	AB=0.925;AC=31;AF=0.554;AN=56;BaseQRankSum=-4.186;DP=512;FS=16.383;HRun=0;HaplotypeScore=111.6740;InbreedingCoeff=0.6079;MQ=56.66;MQ0=15;MQRankSum=1.419;QD=14.90;ReadPosRankSum=4.107;VQSLOD=3.8605;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:27:30.08:281,30,0	0/1:8,0:8:0.59:1,0,116	0/0:22,0:9:25.04:0,25,169	0/0:25,0:11:6.15:0,6,33	1/1:18,8:27:61.72:599,62,0	1/1:2,12:13:23.07:330,23,0	1/1:10,4:18:28.13:310,28,0	0/0:33,0:33:12.15:0,12,433	0/1:4,6:10:3.92:162,0,4	1/1:5,19:25:28.27:577,28,0	1/1:4,15:22:47.51:481,48,0	1/1:16,9:27:21.11:322,21,0	1/1:13,2:14:28.26:262,28,0	1/1:6,9:16:3.75:220,4,0	0/0:12,0:12:3.55:0,4,159	0/1:11,0:11:15.27:15,0,156	0/0:21,0:21:43.95:0,44,272	0/0:12,0:12:18.97:0,19,149	0/0:28,0:26:64.08:0,64,501	0/0:11,0:11:23.22:0,23,147	0/1:8,0:6:5.69:6,0,69	1/1:6,11:19:1.27:351,1,0	1/1:7,10:21:28.02:394,28,0	1/1:5,4:8:8.68:111,9,0	1/1:3,4:11:20.86:247,21,0	0/0:22,0:22:59.38:0,59,464	0/1:19,0:18:23.87:24,0,250	0/0:11,0:10:29.85:0,30,225
chr10	23126315	.	AAG	A	260.62	PASS	AB=0.977;AC=15;AF=0.268;AN=56;BaseQRankSum=3.645;DP=497;FS=32.539;HRun=0;HaplotypeScore=111.7943;InbreedingCoeff=-0.0758;MQ=59.12;MQ0=15;MQRankSum=-9.044;QD=1.20;ReadPosRankSum=-0.263;VQSLOD=-0.1358;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:28:64.17:0,64,706	0/0:8,0:8:2:0,2,74	0/0:22,0:9:22.74:0,23,182	0/1:26,0:12:12.72:13,0,67	0/0:26,0:26:64.89:0,65,620	0/0:14,0:13:26.74:0,27,277	0/0:18,0:18:47.73:0,48,455	0/1:29,1:30:31.19:31,0,192	0/0:8,0:8:11.86:0,12,128	0/0:26,1:27:58.49:0,58,600	0/0:21,0:21:25.20:0,25,349	0/0:23,0:23:9.75:0,10,251	0/1:12,1:12:25.49:25,0,241	0/0:13,0:13:9.12:0,9,127	1/1:10,2:12:1:50,1,0	0/1:9,1:10:42.48:83,0,42	0/1:20,0:20:7.79:51,0,8	1/1:12,0:12:12.69:70,13,0	0/1:29,0:27:22.26:22,0,220	0/1:10,0:10:10.11:10,0,14	0/1:9,0:7:15.54:16,0,44	0/0:16,0:16:26.93:0,27,255	0/0:21,0:21:2.61:0,3,267	0/1:9,0:8:6.39:6,0,59	0/0:12,0:11:13.62:0,14,212	0/1:21,0:21:14.96:15,0,189	0/1:16,1:16:23.67:24,0,138	0/0:15,0:14:19:0,19,192
chr10	23126726	.	GTA	G	9116.54	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-7.512;DP=491;FS=4.808;HRun=0;HaplotypeScore=86.9509;InbreedingCoeff=0.8954;MQ=60.09;MQ0=2;MQRankSum=-0.156;QD=22.79;ReadPosRankSum=2.290;VQSLOD=5.3160;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:9,21:31:50.99:619,51,0	0/0:3,0:5:9:0,9,78	0/0:12,0:8:12.01:0,12,144	0/0:13,0:7:3.01:0,3,44	1/1:5,31:36:69.22:870,69,0	1/1:5,18:23:33.10:416,33,0	1/1:4,6:10:15.05:189,15,0	1/1:20,29:49:87.27:1085,87,0	1/1:5,6:11:18.06:227,18,0	1/1:6,10:16:30.10:378,30,0	1/1:4,16:20:33.11:416,33,0	1/1:1,10:11:27.09:340,27,0	1/1:4,19:23:39.12:491,39,0	1/1:2,18:20:45.14:567,45,0	1/1:4,12:16:30.10:378,30,0	1/1:3,9:12:27.09:340,27,0	0/0:7,0:19:27.02:0,27,254	0/0:1,0:4:9:0,9,80	0/0:3,0:18:14.73:0,15,320	0/0:4,0:4:4.56:0,5,41	0/0:3,0:16:27.01:0,27,240	1/1:9,5:14:9.03:113,9,0	1/1:6,6:12:18.06:227,18,0	1/1:4,8:12:12.04:151,12,0	1/1:4,21:25:51.16:643,51,0	1/1:4,18:21:54.17:681,54,0	1/1:3,24:27:60.19:756,60,0	1/1:4,6:10:18.06:227,18,0
chr10	23127239	.	T	TA	2336.73	PASS	AB=0.773;AC=12;AF=0.214;AN=56;BaseQRankSum=2.383;DP=581;FS=1.444;HRun=9;HaplotypeScore=69.6280;InbreedingCoeff=0.8145;MQ=76.09;MQ0=0;MQRankSum=-0.178;QD=19.97;ReadPosRankSum=-0.563;VQSLOD=3.9760;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:86.97:0,87,753	1/1:0,6:6:18.05:199,18,0	0/0:16,0:16:20.96:0,21,180	0/1:11,0:11:19.45:19,0,122	0/0:25,0:25:62.95:0,63,543	0/0:20,0:21:59.03:0,59,501	0/0:26,0:26:74.98:0,75,649	0/0:29,0:29:62.98:0,63,547	0/0:13,0:13:32.99:0,33,286	0/0:21,1:22:14.80:0,15,357	0/0:25,0:26:73.95:0,74,622	0/0:24,0:24:65.97:0,66,569	0/0:29,0:30:76.93:0,77,642	0/0:20,0:20:47.96:0,48,413	0/0:31,0:31:80.97:0,81,700	0/0:19,0:19:50.99:0,51,443	1/1:4,25:29:66.18:730,66,0	1/1:3,6:9:24.45:240,24,0	1/1:11,11:23:21.87:435,22,0	0/1:3,14:18:4.15:398,0,4	1/1:2,19:21:45.12:497,45,0	0/0:12,0:12:29.98:0,30,260	0/0:16,0:16:44.95:0,45,382	0/0:20,0:20:44.98:0,45,390	0/0:19,0:19:53.89:0,54,453	0/0:24,0:24:50.98:0,51,443	0/0:23,0:23:62.94:0,63,538	0/0:16,0:16:35.95:0,36,308
chr10	23127332	.	G	GT	9719.54	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-3.604;DP=551;FS=8.060;HRun=7;HaplotypeScore=60.7947;InbreedingCoeff=0.9851;MQ=73.49;MQ0=1;MQRankSum=-4.171;QD=26.06;ReadPosRankSum=3.408;VQSLOD=5.4512;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,1:14:28.62:144,29,0	1/1:11,0:11:26.74:183,27,0	0/0:18,0:17:31.64:0,32,336	0/0:21,0:21:48.02:0,48,448	1/1:0,24:25:72.18:853,72,0	1/1:1,15:16:45.14:544,45,0	1/1:2,16:17:39.12:471,39,0	0/0:37,0:36:87.12:0,87,835	1/1:2,13:15:7.13:370,7,0	1/1:3,18:21:54.17:652,54,0	1/1:2,19:21:54.16:649,54,0	1/1:3,16:19:45.14:544,45,0	1/1:3,21:25:60.18:724,60,0	1/1:1,16:17:45.14:544,45,0	0/0:16,0:16:39.06:0,39,376	0/0:19,0:19:54.09:0,54,522	1/1:17,0:17:44.65:324,45,0	1/1:19,0:19:44.40:319,44,0	1/1:23,0:23:58.96:376,59,0	1/1:20,0:20:56.49:392,56,0	1/1:15,0:15:41.57:283,42,0	1/1:1,17:18:48.15:576,48,0	1/1:2,18:20:51.16:614,51,0	1/1:2,11:13:24.07:290,24,0	1/1:0,26:26:72.22:870,72,0	0/0:22,0:22:60.09:0,60,580	0/0:24,0:23:51.08:0,51,492	0/0:21,0:21:37.98:0,38,375
chr10	23127333	.	T	TG	5848.54	PASS	AB=1.000;AC=32;AF=0.571;AN=56;BaseQRankSum=5.543;DP=551;FS=2.347;HRun=1;HaplotypeScore=73.5788;InbreedingCoeff=0.5516;MQ=73.54;MQ0=1;MQRankSum=-3.400;QD=16.29;ReadPosRankSum=6.186;VQSLOD=5.1049;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:26.89:0,27,130	1/1:0,11:11:27.09:404,27,0	0/0:18,0:17:44.13:0,44,543	0/0:21,0:21:57.07:0,57,690	1/1:25,0:25:58.73:231,59,0	1/1:15,0:15:37.73:142,38,0	0/1:18,0:17:15.56:84,0,16	0/0:37,0:36:99:0,99,1327	0/1:15,0:15:34.31:80,0,34	0/1:21,0:21:21.75:113,0,22	0/1:21,0:21:3.81:115,0,4	1/1:17,0:17:16.04:123,16,0	0/1:26,0:26:21.28:130,0,21	1/1:18,0:18:12.37:114,12,0	0/0:16,0:16:48.13:0,48,624	0/0:19,0:19:57.18:0,57,781	1/1:2,15:17:45.15:670,45,0	1/1:4,17:21:43:662,43,0	1/1:0,22:22:66.18:942,66,0	1/1:1,19:20:57.19:842,57,0	1/1:1,14:15:45.14:653,45,0	1/1:18,0:18:1.56:130,2,0	1/1:19,1:20:19.99:162,20,0	0/1:13,0:13:19.69:49,0,20	1/1:26,0:26:57.53:203,58,0	0/0:22,0:22:66.21:0,66,894	0/0:24,0:23:69:0,69,853	0/0:21,0:21:47.02:0,47,613
chr10	23127998	.	G	GT	1679.58	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-9.750;DP=707;FS=0.635;HRun=0;HaplotypeScore=70.0298;InbreedingCoeff=0.9824;MQ=83.34;MQ0=0;MQRankSum=-4.311;QD=40.97;ReadPosRankSum=-0.055;VQSLOD=4.0107;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,40:41:99:1774,111,0	0/0:8,0:8:24.08:0,24,336	0/0:30,0:30:87.25:0,87,1172	0/0:25,0:25:72.22:0,72,972	0/0:25,0:25:72.24:0,72,1007	0/0:23,0:23:66.22:0,66,923	0/0:31,0:31:93.31:0,93,1301	0/0:36,0:36:99:0,105,1436	0/0:24,0:24:72.22:0,72,989	0/0:28,0:28:81.27:0,81,1133	0/0:16,0:16:48.16:0,48,671	0/0:23,0:23:63.21:0,63,880	0/0:39,0:39:99:0,117,1632	0/0:21,0:21:63.21:0,63,878	0/0:36,0:36:99:0,108,1510	0/0:26,0:26:75.25:0,75,1047	0/0:20,0:20:60.20:0,60,837	0/0:12,0:12:36.12:0,36,503	0/0:19,0:19:57.19:0,57,795	0/0:14,0:14:42.14:0,42,587	0/0:42,0:42:99:0,123,1698	0/0:27,0:27:81.27:0,81,1132	0/0:18,0:18:48.16:0,48,671	0/0:24,0:23:66.22:0,66,918	0/0:22,0:22:66.22:0,66,923	0/0:38,0:38:99:0,114,1591	0/0:34,0:34:99:0,99,1367	0/0:5,0:5:15.05:0,15,210
chr10	23128219	.	GT	G	3079.06	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=4.392;DP=630;FS=2.392;HRun=5;HaplotypeScore=72.1911;InbreedingCoeff=0.9992;MQ=88.78;MQ0=0;MQRankSum=-2.746;QD=29.32;ReadPosRankSum=2.906;VQSLOD=4.4040;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:63.21:0,63,862	1/1:0,10:10:30.09:340,30,0	0/0:32,0:32:84.25:0,84,1076	0/0:13,0:13:27.05:0,27,348	0/0:33,0:33:99:0,99,1352	0/0:25,0:25:72.23:0,72,971	0/0:19,0:19:50.84:0,51,668	0/0:49,0:49:99:0,138,1875	0/0:23,0:23:66.21:0,66,887	0/0:28,0:28:81.25:0,81,1063	0/0:27,0:27:81.27:0,81,1108	0/0:26,0:26:78.25:0,78,1055	0/0:29,0:29:84.28:0,84,1146	0/0:23,0:23:54.17:0,54,723	0/0:24,0:24:72.24:0,72,985	0/0:29,0:29:81.25:0,81,1077	1/1:0,15:15:42.12:476,42,0	1/1:0,9:9:24.07:272,24,0	1/1:2,12:14:36.10:408,36,0	1/1:1,42:43:99:1327,117,0	1/1:0,14:14:39.11:442,39,0	0/0:15,0:15:42.14:0,42,575	0/0:18,0:18:51.17:0,51,698	0/0:12,0:12:36.12:0,36,492	0/0:17,0:17:48.16:0,48,656	0/0:19,0:19:54.18:0,54,739	0/0:23,0:23:69.22:0,69,927	0/0:18,0:18:51.17:0,51,698
chr10	23129168	.	CA	C	3643.20	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-0.846;DP=562;FS=0.404;HRun=3;HaplotypeScore=70.2627;InbreedingCoeff=0.9652;MQ=81.36;MQ0=0;MQRankSum=-0.470;QD=32.82;ReadPosRankSum=0.966;VQSLOD=3.9262;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:33.11:0,33,467	1/1:1,11:12:33.10:409,33,0	0/0:14,0:14:39.11:0,39,518	0/0:17,0:17:45.08:0,45,565	0/0:33,0:33:99:0,99,1426	0/0:24,0:24:72.24:0,72,1036	0/0:19,0:19:57.19:0,57,819	0/0:29,0:29:84.27:0,84,1178	0/0:19,0:19:57.19:0,57,820	0/0:26,0:26:78.26:0,78,1109	0/0:26,0:26:75.25:0,75,1080	0/0:21,0:21:63.21:0,63,907	0/0:35,0:35:99:0,102,1458	0/0:23,0:23:69.23:0,69,993	0/0:27,0:27:81.26:0,81,1147	0/0:15,0:15:45.15:0,45,648	1/1:1,18:19:42.13:521,42,0	1/1:0,12:12:36.11:446,36,0	1/1:1,13:14:39.12:482,39,0	1/1:0,32:32:90.28:1116,90,0	1/1:1,21:22:54.17:669,54,0	0/0:14,0:14:42.14:0,42,605	0/0:18,0:18:51.05:0,51,687	0/0:14,0:14:42.13:0,42,587	0/0:22,0:22:66.22:0,66,935	0/0:16,0:16:45.14:0,45,631	0/0:26,0:26:78.26:0,78,1122	0/0:1,0:1:3.01:0,3,43
chr10	23131529	.	CATATATGTAT	C	9945.98	PASS	AC=26;AF=0.481;AN=54;BaseQRankSum=6.866;DP=590;FS=0.429;HRun=0;HaplotypeScore=197.1306;InbreedingCoeff=0.9660;MQ=57.97;MQ0=1;MQRankSum=-12.414;QD=33.38;ReadPosRankSum=3.313;VQSLOD=4.5275;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:12.04:0,12,369	0/0:10,0:10:18.06:0,18,545	./.	0/0:13,0:10:11.94:0,12,177	1/1:13,19:32:12.03:345,12,0	1/1:3,18:21:30.10:925,30,0	1/1:4,10:14:9.03:277,9,0	0/0:42,0:42:78.26:0,78,3301	1/1:6,17:23:33.11:1014,33,0	1/1:8,12:20:36.10:965,36,0	1/1:3,19:22:24.08:740,24,0	1/1:7,10:17:21.07:644,21,0	1/1:8,28:36:45.15:1375,45,0	1/1:8,19:26:21.07:643,21,0	0/0:28,0:28:66.23:0,66,2898	0/0:26,0:26:66.21:0,66,3097	0/0:16,0:15:30.10:0,30,1015	0/0:10,0:10:21.02:0,21,495	0/0:12,0:12:30.10:0,30,911	0/0:28,0:28:51.17:0,51,1468	0/0:9,0:9:12.04:0,12,372	1/1:1,13:14:30.10:925,30,0	1/1:8,20:28:24.08:740,24,0	1/1:5,11:16:12.04:335,12,0	1/1:8,20:28:33.11:1017,33,0	0/0:23,0:23:54.18:0,54,2492	0/0:37,0:37:99:0,102,4814	0/0:17,0:17:48.16:0,48,1931
chr10	23131546	.	GTA	G	2462.06	PASS	AB=0.996;AC=27;AF=0.482;AN=56;BaseQRankSum=14.050;DP=525;FS=4.951;HRun=0;HaplotypeScore=134.8220;InbreedingCoeff=0.1785;MQ=58.30;MQ0=1;MQRankSum=-8.637;QD=7.82;ReadPosRankSum=6.901;VQSLOD=2.6686;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:3,0:8:6.01:0,6,58	1/1:0,8:8:18.06:234,18,0	0/0:12,0:5:1.36:0,1,44	0/0:17,0:10:11.95:0,12,159	0/1:22,0:22:4.74:5,0,126	0/1:19,0:19:17.15:76,0,17	0/1:14,0:14:11.77:12,0,167	0/0:34,1:35:42.24:0,42,1260	0/1:19,0:19:59.21:79,0,59	0/1:14,0:14:52.53:53,0,87	0/1:22,0:22:24.11:60,0,24	0/1:13,0:13:44:44,0,113	0/1:29,0:29:4.53:108,0,5	0/1:20,0:20:26.23:50,0,26	0/0:30,0:30:72.22:0,72,1169	0/0:25,0:25:72.25:0,72,1211	1/1:3,7:10:21.07:273,21,0	1/1:1,9:10:15.05:195,15,0	1/1:0,14:14:39.12:492,39,0	1/1:2,24:26:45.15:585,45,0	1/1:1,5:6:9.03:117,9,0	1/1:13,0:13:26.70:106,27,0	0/1:21,0:21:17.81:61,0,18	1/1:12,0:12:4.55:20,5,0	0/1:22,0:22:36.38:81,0,36	0/0:26,0:26:75.25:0,75,1239	0/0:39,0:39:99:0,108,1817	0/0:18,0:18:30.08:0,30,480
chr10	23131836	.	C	CA	112.37	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-0.537;DP=453;FS=4.052;HRun=4;HaplotypeScore=88.9109;InbreedingCoeff=0.6938;MQ=51.43;MQ0=4;MQRankSum=-0.347;QD=16.05;ReadPosRankSum=-1.111;VQSLOD=2.9748;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,6:7:1.35:188,1,0	0/0:7,0:7:21.03:0,21,225	0/0:20,0:11:30.07:0,30,331	0/0:23,0:11:27.06:0,27,289	0/0:19,0:19:42.05:0,42,451	0/0:12,0:12:22.99:0,23,296	0/0:10,0:10:30.08:0,30,338	0/0:25,0:24:63.16:0,63,703	0/0:16,0:16:33.09:0,33,371	0/0:16,0:15:45.06:0,45,494	0/0:15,0:15:42.12:0,42,474	0/0:21,0:21:51.14:0,51,566	0/0:19,0:18:48.12:0,48,531	0/0:14,0:14:33.09:0,33,363	0/0:21,0:21:54.10:0,54,590	0/0:22,0:22:59.80:0,60,626	0/0:12,0:12:33.09:0,33,368	0/0:10,0:10:26.66:0,27,278	0/0:20,0:18:51.15:0,51,578	0/0:12,0:12:33.07:0,33,356	0/0:8,0:8:24.07:0,24,270	0/0:9,0:9:21.05:0,21,230	0/0:27,0:27:69.20:0,69,780	0/0:9,0:9:15.04:0,15,165	0/0:23,0:23:66.14:0,66,726	0/0:22,0:22:66.18:0,66,733	0/0:25,0:24:66.14:0,66,731	0/0:9,0:9:27.08:0,27,305
chr10	23131850	.	GGAGAGA	G	754.47	PASS	AB=0.986;AC=25;AF=0.543;AN=46;BaseQRankSum=3.356;DP=437;FS=27.864;HRun=0;HaplotypeScore=127.0980;InbreedingCoeff=0.5010;MQ=47.57;MQ0=13;MQRankSum=-2.338;QD=3.25;ReadPosRankSum=-0.872;VQSLOD=0.8914;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:8:3.01:0,3,47	0/0:9,0:9:9.03:0,9,157	./.	./.	./.	1/1:11,0:10:6.02:96,6,0	1/1:7,2:9:6.02:122,6,0	./.	1/1:12,6:18:6.02:119,6,0	0/1:21,1:21:29.83:52,0,30	1/1:16,0:15:2.96:20,3,0	1/1:14,0:15:5.38:48,5,0	1/1:16,0:16:7.12:76,7,0	1/1:10,3:13:12:202,12,0	0/0:22,0:22:9.02:0,9,183	0/0:19,0:19:21.02:0,21,397	0/0:13,0:12:11.49:0,11,146	0/0:9,0:9:15.02:0,15,255	0/0:19,0:17:10.85:0,11,174	0/0:15,0:15:9.02:0,9,122	0/0:11,0:11:6.02:0,6,120	0/1:9,0:8:0:0,0,0	1/1:24,0:24:5.90:38,6,0	0/1:9,0:9:10.06:10,0,54	1/1:23,0:24:0.88:2,1,0	1/1:19,0:21:6.02:84,6,0	1/1:23,0:23:3.01:42,3,0	./.
chr10	23131907	.	G	GGAA	10562.73	PASS	AB=0.905;AC=54;AF=0.964;AN=56;BaseQRankSum=-5.822;DP=392;FS=15.240;HRun=0;HaplotypeScore=126.2612;InbreedingCoeff=-0.0611;MQ=70.09;MQ0=19;MQRankSum=-4.530;QD=26.95;ReadPosRankSum=2.843;VQSLOD=4.4821;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,4:5:11.60:256,12,0	1/1:1,0:1:2.98:22,3,0	0/1:50,7:15:38.84:186,0,39	0/1:82,7:29:99:414,0,242	1/1:3,11:13:30.05:597,30,0	1/1:2,8:11:19.31:387,19,0	1/1:2,4:6:11.92:256,12,0	1/1:5,13:20:45.14:832,45,0	1/1:5,1:6:3.01:64,3,0	1/1:2,7:8:21.07:444,21,0	1/1:3,7:9:14.62:381,15,0	1/1:1,7:8:20.76:449,21,0	1/1:3,5:8:15.05:321,15,0	1/1:4,7:12:20.15:401,20,0	1/1:7,7:14:23.75:468,24,0	1/1:5,10:15:30.05:598,30,0	1/1:2,5:7:9.03:193,9,0	1/1:0,4:4:12.04:257,12,0	1/1:3,10:11:27.08:503,27,0	1/1:3,10:13:27.09:551,27,0	1/1:1,5:6:15.05:322,15,0	1/1:0,8:8:24:467,24,0	1/1:4,8:12:22.32:422,22,0	1/1:3,4:7:9.97:194,10,0	1/1:4,5:9:15.52:294,16,0	1/1:3,11:14:33.11:708,33,0	1/1:1,4:7:18.06:383,18,0	1/1:0,3:3:9.03:193,9,0
chr10	23131921	.	A	AAG	111.20	PASS	AB=0.819;AC=7;AF=0.125;AN=56;BaseQRankSum=8.186;DP=371;FS=19.562;HRun=0;HaplotypeScore=173.3938;InbreedingCoeff=-0.1768;MQ=69.52;MQ0=11;MQRankSum=-2.905;QD=1.26;ReadPosRankSum=-2.410;VQSLOD=1.1972;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:5:15.05:0,15,243	0/0:2,0:2:6.02:0,6,97	0/0:42,0:20:39.97:0,40,643	0/0:57,0:24:48.72:0,49,725	0/0:13,0:13:33.11:0,33,533	0/0:12,0:12:11.53:0,12,233	0/0:4,1:5:8.12:0,8,147	0/0:22,0:20:50.27:0,50,724	0/1:4,4:8:68.75:69,0,78	0/0:9,0:9:23.75:0,24,353	0/1:8,2:10:27.31:27,0,312	0/0:12,1:13:21.18:0,21,384	0/0:9,0:9:18.02:0,18,265	0/1:11,3:13:30.48:30,0,284	0/1:14,4:18:52.86:53,0,443	0/0:16,2:18:1.85:0,2,635	0/0:5,0:5:9.03:0,9,147	0/0:4,0:4:12.04:0,12,195	0/0:15,0:11:27.09:0,27,439	0/0:14,1:15:2.97:0,3,456	0/0:6,0:6:15.05:0,15,244	0/0:9,0:9:27.09:0,27,439	0/1:12,2:14:9.23:9,0,314	0/0:5,0:5:12.04:0,12,195	0/1:8,3:11:35.24:35,0,276	0/1:12,1:13:13.29:13,0,501	0/0:11,0:11:23.78:0,24,390	0/0:4,0:3:9.03:0,9,146
chr10	23131942	.	A	AG	822.82	PASS	AB=0.767;AC=18;AF=0.321;AN=56;BaseQRankSum=6.701;DP=309;FS=11.767;HRun=2;HaplotypeScore=98.5939;InbreedingCoeff=-0.5049;MQ=54.13;MQ0=5;MQRankSum=-5.040;QD=3.59;ReadPosRankSum=1.088;VQSLOD=-0.7474;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:4:9.03:0,9,111	0/0:2,0:2:6.02:0,6,74	0/0:17,0:12:32.98:0,33,361	0/0:21,0:17:15.18:0,15,116	0/1:13,3:16:26.69:27,0,302	0/1:9,3:12:73.07:73,0,195	0/1:3,2:5:33.93:34,0,43	0/1:22,3:23:74.44:74,0,397	0/1:1,8:9:13.73:104,0,14	0/1:7,4:11:97.11:97,0,129	0/1:9,3:12:36.84:37,0,230	0/1:7,7:14:99:102,0,218	0/1:5,3:8:26.54:27,0,154	0/1:4,6:9:84.91:88,0,85	0/1:7,8:15:93.57:94,0,217	0/1:15,3:18:43.52:44,0,432	0/0:2,0:3:4.26:0,4,40	0/0:5,0:5:9.50:0,9,113	0/0:13,1:11:33.10:0,33,409	0/1:9,3:12:27.02:27,0,263	0/0:3,0:3:9.03:0,9,111	0/1:9,1:10:7.29:7,0,270	0/1:12,3:15:15.81:16,0,199	0/0:4,1:5:7.10:0,7,108	0/1:7,4:11:25.04:25,0,230	0/1:11,2:13:42.03:42,0,325	0/1:10,2:12:61.69:62,0,280	0/0:5,0:3:9.03:0,9,111
chr10	23132711	.	AAC	A	4046.71	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=10.152;DP=674;FS=0.396;HRun=0;HaplotypeScore=87.4176;InbreedingCoeff=0.9984;MQ=74.57;MQ0=0;MQRankSum=-2.615;QD=33.44;ReadPosRankSum=2.370;VQSLOD=6.0151;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,99,1564	1/1:0,9:9:24.08:341,24,0	0/0:22,0:21:53.03:0,53,729	0/0:13,0:13:25.33:0,25,330	0/0:30,0:30:84.23:0,84,1461	0/0:29,0:29:87.01:0,87,1515	0/0:19,0:18:54.07:0,54,917	0/0:34,0:34:96.19:0,96,1593	0/0:24,0:24:69.24:0,69,1278	0/0:29,0:29:87.13:0,87,1446	0/0:30,0:30:90.09:0,90,1562	0/0:26,0:26:75.22:0,75,1258	0/0:18,0:18:54.15:0,54,938	0/0:26,0:26:72.18:0,72,1240	0/0:31,0:31:93.23:0,93,1543	0/0:20,0:20:60.19:0,60,1073	1/1:2,21:23:54.45:735,54,0	1/1:0,9:9:21.07:299,21,0	1/1:2,26:28:55.83:966,56,0	1/1:0,33:33:78.22:1108,78,0	1/1:0,19:19:42.14:599,42,0	0/0:17,0:17:51.13:0,51,828	0/0:24,0:24:72.15:0,72,1186	0/0:14,0:14:42.14:0,42,757	0/0:29,0:29:75.07:0,75,1338	0/0:34,0:34:99:0,102,1895	0/0:34,0:34:99:0,102,1725	0/0:16,0:16:45.05:0,45,680
chr10	23132792	.	C	CTCCTTCCTTCCT	6670.91	PASS	AB=0.990;AC=46;AF=0.885;AN=52;BaseQRankSum=-6.238;DP=636;FS=1.843;HRun=0;HaplotypeScore=217.2456;InbreedingCoeff=0.0477;MQ=56.93;MQ0=7;MQRankSum=-1.629;QD=11.56;ReadPosRankSum=-0.610;VQSLOD=3.7898;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:30:23.84:310,24,0	1/1:15,0:14:26.91:369,27,0	./.	./.	1/1:13,0:16:12.04:225,12,0	1/1:24,0:27:33.05:736,33,0	1/1:17,0:21:30.03:467,30,0	1/1:28,0:26:2.97:20,3,0	1/1:9,0:26:12.04:252,12,0	1/1:21,0:20:6.02:99,6,0	1/1:17,0:26:27.04:550,27,0	1/1:10,13:24:3.01:132,3,0	1/1:18,0:19:21.06:594,21,0	1/1:12,8:21:3.01:149,3,0	0/1:16,0:35:29.51:30,0,556	0/1:15,0:23:4.75:5,0,437	0/1:24,0:25:9.50:185,0,10	0/1:10,0:10:3.41:113,0,3	1/1:27,0:26:27.53:440,28,0	1/1:27,0:27:51.95:717,52,0	1/1:19,0:19:12.01:130,12,0	1/1:17,0:22:12.04:312,12,0	1/1:30,0:33:13.81:299,14,0	1/1:17,0:19:18.49:231,18,0	1/1:16,5:26:3.01:151,3,0	1/1:14,0:23:0.18:67,0,0	0/0:10,0:18:1.55:0,2,4	1/1:9,0:9:4.75:91,5,0
chr10	23132810	.	C	CCTTCCTTT	6339.89	PASS	AB=1.000;AC=26;AF=0.464;AN=56;BaseQRankSum=1.611;DP=619;FS=8.574;HRun=0;HaplotypeScore=171.8128;InbreedingCoeff=-0.0450;MQ=49.03;MQ0=13;MQRankSum=-5.478;QD=14.28;ReadPosRankSum=8.737;VQSLOD=2.1212;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:27:99:241,0,208	1/1:10,3:13:35.98:799,36,0	0/0:18,0:3:3.01:0,3,32	0/0:17,0:5:8.98:0,9,82	0/0:23,0:23:7.20:0,7,280	0/1:29,0:28:99:202,0,213	0/1:20,0:19:46.71:47,0,88	0/0:22,0:18:37.35:0,37,290	0/1:26,0:26:99:285,0,123	0/0:16,0:15:15.95:0,16,199	0/1:29,0:29:79.58:80,0,224	0/1:22,0:22:28.98:29,0,170	0/1:20,0:20:99:182,0,106	0/1:23,0:22:23.25:23,0,251	0/0:31,0:31:51.30:0,51,657	0/0:30,0:29:66.46:0,66,706	1/1:25,1:26:4.79:738,5,0	1/1:8,1:9:20.97:336,21,0	1/1:19,3:19:52.13:1226,52,0	1/1:25,5:30:69.15:1536,69,0	1/1:18,0:18:37.82:449,38,0	0/1:20,0:20:9.97:10,0,224	0/1:27,0:27:83.80:84,0,294	0/1:21,0:21:11.20:11,0,101	0/1:29,0:29:11.83:12,0,343	0/1:23,0:23:48.97:49,0,239	0/0:17,0:17:4.02:0,4,109	0/1:7,0:6:2.07:2,0,49
chr10	23132848	.	TTC	T	1613.13	PASS	AB=0.815;AC=14;AF=0.250;AN=56;BaseQRankSum=5.038;DP=596;FS=1.370;HRun=0;HaplotypeScore=156.8804;InbreedingCoeff=0.6331;MQ=51.22;MQ0=13;MQRankSum=-3.177;QD=8.27;ReadPosRankSum=2.459;VQSLOD=3.4800;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:26,2:26:0.66:110,0,1	1/1:5,4:8:11.21:120,11,0	0/0:28,0:8:23.67:0,24,334	0/0:31,0:8:12.51:0,13,169	0/0:24,0:24:60.68:0,61,1024	0/0:30,0:28:41.51:0,42,642	0/0:13,0:12:12.04:0,12,192	0/0:24,0:24:48.13:0,48,680	0/0:24,0:24:33.11:0,33,494	0/0:18,0:17:50.52:0,51,735	0/0:23,0:23:52.16:0,52,811	0/0:14,0:14:27.07:0,27,400	0/0:18,0:18:26.24:0,26,394	0/0:25,0:24:50.84:0,51,824	0/1:16,0:26:7.42:129,0,7	0/1:10,0:29:8.03:123,0,8	1/1:23,4:27:1.29:232,1,0	0/1:11,0:9:7.17:7,0,9	1/1:9,8:16:32.75:355,33,0	1/1:23,9:32:45.63:435,46,0	1/1:11,5:16:30.60:274,31,0	0/0:15,0:15:39.08:0,39,576	0/0:19,0:19:50.92:0,51,764	0/0:22,0:22:29.66:0,30,481	0/0:27,0:27:56.85:0,57,913	0/0:21,0:21:63.22:0,63,1030	0/0:22,0:22:54.17:0,54,852	0/0:3,0:3:2.80:0,3,37
chr10	23132860	.	C	CTT	5128.34	PASS	AB=1.000;AC=24;AF=0.429;AN=56;BaseQRankSum=2.827;DP=619;FS=0.000;HRun=1;HaplotypeScore=143.5259;InbreedingCoeff=0.2290;MQ=54.01;MQ0=13;MQRankSum=3.961;QD=14.29;ReadPosRankSum=1.955;VQSLOD=1.8875;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,23:26:14.10:585,14,0	1/1:5,1:5:11.95:152,12,0	0/0:21,0:9:26.73:0,27,349	0/0:27,0:9:15.51:0,16,193	0/1:29,0:29:99:151,0,304	0/0:36,1:35:11.58:0,12,177	0/0:13,0:12:8.27:0,8,134	0/0:32,0:32:81.68:0,82,917	0/1:20,0:20:28.26:39,0,28	0/1:21,0:20:80.14:80,0,113	0/1:21,0:21:16.17:16,0,372	0/1:16,0:16:9.06:67,0,9	0/1:20,0:20:8.44:8,0,41	0/1:28,0:27:70.80:94,0,71	0/0:24,0:24:68.04:0,68,451	0/0:28,0:28:53.09:0,53,364	1/1:16,13:32:53.42:1056,53,0	1/1:4,2:10:7.88:203,8,0	1/1:12,3:14:38.88:467,39,0	1/1:17,14:31:88.87:1321,89,0	1/1:8,6:15:39.13:614,39,0	0/1:17,0:17:99:128,0,154	0/1:22,0:22:71.68:72,0,147	0/0:24,0:25:2.76:0,3,81	0/1:27,0:27:68.59:73,0,69	0/0:27,0:27:75.69:0,76,1052	0/0:22,0:22:57.16:0,57,822	0/0:4,0:4:11.65:0,12,92
chr10	23132873	.	T	TCTTC	16203.83	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-2.232;DP=631;FS=3.948;HRun=0;HaplotypeScore=117.8533;InbreedingCoeff=0.9285;MQ=57.12;MQ0=9;MQRankSum=6.068;QD=35.53;ReadPosRankSum=4.153;VQSLOD=5.1357;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:26:26.44:522,26,0	1/1:6,0:5:11.95:115,12,0	0/0:14,0:11:24:0,24,229	0/0:12,0:6:6.02:0,6,88	1/1:18,11:29:78.17:1474,78,0	1/1:8,33:40:27.09:685,27,0	1/1:3,12:14:3.01:76,3,0	0/0:29,0:29:63.14:0,63,844	1/1:15,6:21:42.06:866,42,0	1/1:3,21:24:41.22:1211,41,0	1/1:17,3:20:53.97:913,54,0	1/1:11,7:18:44.93:842,45,0	1/1:1,19:22:25.87:559,26,0	1/1:12,15:27:75.15:1477,75,0	0/0:27,0:27:62.22:0,62,816	0/0:31,0:31:65.26:0,65,731	1/1:32,0:32:57.28:1022,57,0	1/1:10,0:10:26.73:319,27,0	1/1:13,0:12:18.04:231,18,0	1/1:29,0:29:75.05:1053,75,0	1/1:15,0:16:33.01:456,33,0	1/1:15,5:20:54.07:976,54,0	1/1:17,8:25:66.09:1239,66,0	1/1:7,22:29:29.78:646,30,0	1/1:15,12:27:69.19:1522,69,0	0/0:30,1:31:8.06:0,8,1122	0/0:24,0:24:66.15:0,66,1024	0/0:6,0:6:12.01:0,12,144
chr10	23134188	.	CT	C	2704.83	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=10.566;DP=546;FS=8.128;HRun=5;HaplotypeScore=54.2194;InbreedingCoeff=0.9924;MQ=79.45;MQ0=0;MQRankSum=-2.309;QD=28.47;ReadPosRankSum=0.503;VQSLOD=3.5277;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:8:21.07:0,21,287	1/1:0,14:14:42.12:476,42,0	0/0:15,0:15:35.58:0,36,349	0/0:10,0:10:20.79:0,21,226	0/0:28,0:28:75.25:0,75,1024	0/0:29,0:29:81.27:0,81,1107	0/0:7,0:7:21.07:0,21,284	0/0:26,0:26:66.22:0,66,903	0/0:23,0:23:63.19:0,63,844	0/0:24,0:24:72.23:0,72,972	0/0:27,0:27:78.21:0,78,1032	0/0:16,0:16:45.14:0,45,598	0/0:21,0:21:63.20:0,63,846	0/0:27,0:27:81.27:0,81,1108	0/0:19,0:19:57.19:0,57,780	0/0:22,0:22:60.19:0,60,805	1/1:1,9:10:24.07:272,24,0	1/1:0,7:7:15.04:170,15,0	1/1:2,15:17:45.13:510,45,0	1/1:1,38:39:99:1191,105,0	1/1:0,8:8:24.07:272,24,0	0/0:24,0:24:69.23:0,69,941	0/0:23,0:23:66.21:0,66,887	0/0:9,0:9:27.09:0,27,369	0/0:31,0:31:93.29:0,93,1243	0/0:22,0:22:66.22:0,66,899	0/0:33,0:33:96.30:0,96,1293	0/0:7,0:7:21.07:0,21,287
chr10	23134533	.	AT	A	5170.50	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=4.079;DP=621;FS=3.570;HRun=3;HaplotypeScore=71.7554;InbreedingCoeff=0.9628;MQ=79.22;MQ0=0;MQRankSum=-2.129;QD=33.14;ReadPosRankSum=-0.963;VQSLOD=4.8479;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:42.14:0,42,604	0/0:9,0:9:27.09:0,27,389	0/0:19,0:19:51.03:0,51,662	0/0:11,0:11:33.11:0,33,461	0/0:32,0:32:93.31:0,93,1330	0/0:24,0:24:69.23:0,69,992	0/0:14,0:14:42.12:0,42,581	1/1:6,29:35:84.24:1016,84,0	0/0:22,0:22:63.20:0,63,889	0/0:34,0:34:96.32:0,96,1368	0/0:26,0:26:75.24:0,75,1055	0/0:21,0:21:63.21:0,63,907	0/0:27,0:27:81.27:0,81,1163	0/0:28,0:28:84.26:0,84,1173	1/1:0,30:30:84.26:1042,84,0	1/1:0,28:28:78.25:967,78,0	0/0:13,0:13:39.06:0,39,505	0/0:7,0:7:21.07:0,21,302	0/0:24,0:24:72.24:0,72,1034	0/0:37,0:37:99:0,108,1536	0/0:12,0:12:36.10:0,36,499	0/0:30,0:30:87.29:0,87,1246	0/0:24,0:24:72.24:0,72,1025	0/0:12,0:12:36.12:0,36,518	0/0:25,0:25:75.25:0,75,1078	1/1:0,30:30:90.28:1112,90,0	1/1:1,28:29:81.12:996,81,0	1/1:0,4:4:3.01:37,3,0
chr10	23135986	.	A	AT	2143.83	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=-11.254;DP=483;FS=2.322;HRun=6;HaplotypeScore=66.7624;InbreedingCoeff=0.8113;MQ=70.93;MQ0=0;MQRankSum=-0.930;QD=27.49;ReadPosRankSum=-1.739;VQSLOD=3.4979;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:45.10:0,45,459	0/0:10,0:10:27.04:0,27,268	0/0:7,0:7:11.24:0,11,140	0/1:7,0:6:17.22:17,0,22	0/0:24,0:24:69.12:0,69,689	0/0:18,0:18:54.12:0,54,551	0/0:11,0:11:27.06:0,27,275	1/1:6,15:21:45.14:566,45,0	0/0:22,0:22:63.14:0,63,643	0/0:25,0:25:72.15:0,72,723	0/0:26,0:26:66.13:0,66,666	0/0:17,0:17:48.10:0,48,484	0/0:19,0:19:39.06:0,39,390	0/0:14,0:14:33.07:0,33,337	0/0:22,0:22:66.12:0,66,660	0/0:17,0:17:39.08:0,39,398	0/0:23,0:23:69.15:0,69,697	0/0:10,0:10:27.06:0,27,275	0/0:17,0:17:39.09:0,39,397	0/0:30,0:30:87.15:0,87,866	0/0:10,0:10:24.05:0,24,245	0/0:12,0:12:33.08:0,33,337	0/0:22,0:22:63.12:0,63,635	0/0:11,0:11:27.06:0,27,275	0/0:22,0:22:63.14:0,63,638	1/1:2,19:21:60.18:736,60,0	1/1:2,26:28:75.24:943,75,0	1/1:0,1:1:3.01:38,3,0
chr10	23136245	.	G	GA	9491.98	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-10.405;DP=444;FS=3.407;HRun=6;HaplotypeScore=44.1082;InbreedingCoeff=0.9684;MQ=74.51;MQ0=0;MQRankSum=-1.555;QD=32.51;ReadPosRankSum=2.342;VQSLOD=5.0156;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:42.09:0,42,428	1/1:0,4:4:12.04:151,12,0	0/0:11,0:11:30.07:0,30,305	0/0:5,0:4:11.97:0,12,99	1/1:1,18:19:54.17:677,54,0	1/1:0,15:15:45.14:566,45,0	1/1:0,5:5:12.04:151,12,0	0/0:27,0:27:72.15:0,72,726	1/1:1,17:18:42.13:528,42,0	1/1:1,10:11:30.10:377,30,0	1/1:4,21:25:63.03:769,63,0	1/1:3,16:19:42.13:527,42,0	1/1:3,23:26:69.22:864,69,0	1/1:2,16:18:39.12:491,39,0	0/0:14,0:14:39.09:0,39,398	0/0:14,0:14:36.08:0,36,367	1/1:1,13:14:36.11:449,36,0	1/1:3,9:12:30.09:370,30,0	1/1:1,12:13:36.12:453,36,0	1/1:1,28:29:84.20:1023,84,0	1/1:0,9:9:24.08:302,24,0	1/1:1,14:15:39.08:473,39,0	1/1:1,21:22:57.18:717,57,0	1/1:0,2:2:6.02:75,6,0	1/1:2,14:16:42.13:528,42,0	0/0:23,1:24:31.41:0,31,636	0/0:31,0:31:81.18:0,81,825	0/0:10,0:10:27.06:0,27,275
chr10	23137455	.	T	TAA	4084.14	PASS	AB=0.938;AC=24;AF=0.429;AN=56;BaseQRankSum=0.910;DP=490;FS=5.243;HRun=8;HaplotypeScore=60.9216;InbreedingCoeff=0.8363;MQ=69.13;MQ0=0;MQRankSum=0.728;QD=19.26;ReadPosRankSum=-1.865;VQSLOD=1.4801;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,0:4:4.91:17,5,0	1/1:1,0:6:9.98:34,10,0	0/1:11,0:11:4.84:5,0,176	0/1:6,0:7:3.27:3,0,114	0/0:47,0:47:99:0,126,1394	0/0:13,0:13:24.03:0,24,267	0/0:9,0:9:24.05:0,24,258	1/1:9,30:39:90.76:1397,91,0	0/0:11,0:11:27.04:0,27,291	0/0:12,0:12:30.06:0,30,334	0/0:31,0:31:84.18:0,84,915	0/0:13,0:13:30.06:0,30,325	0/0:15,0:15:39.09:0,39,435	0/0:16,0:16:33.06:0,33,367	0/0:20,0:20:48.08:0,48,525	0/0:18,0:18:45.08:0,45,492	1/1:1,0:7:14.97:52,15,0	1/1:4,0:11:17.47:60,17,0	1/1:4,0:17:33.07:132,33,0	1/1:4,0:27:24.94:168,25,0	1/1:0,0:15:34.93:120,35,0	0/0:11,0:11:33.09:0,33,368	0/0:23,0:23:63.13:0,63,683	0/0:15,0:15:33.07:0,33,368	0/0:24,0:24:63.14:0,63,694	1/1:4,23:27:2.31:880,2,0	1/1:7,22:30:57.19:884,57,0	1/1:0,11:11:21.07:333,21,0
chr10	23137608	.	TTGAAATTAATA	T	7586.06	PASS	AB=0.529;AC=9;AF=0.167;AN=54;BaseQRankSum=13.789;DP=544;FS=0.000;HRun=0;HaplotypeScore=173.3465;InbreedingCoeff=0.8552;MQ=76.33;MQ0=0;MQRankSum=-8.266;QD=61.68;ReadPosRankSum=-0.467;VQSLOD=4.0174;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:27.09:0,27,1274	0/0:9,0:9:27.09:0,27,1268	0/0:17,0:17:29.13:0,29,982	0/0:9,0:9:12.04:0,12,509	0/0:34,0:34:81.28:0,81,4342	0/0:30,0:30:78.27:0,78,4021	0/0:18,0:18:36.12:0,36,1641	1/1:9,25:34:75.23:1660,75,0	0/0:13,0:13:30.10:0,30,1648	0/0:27,0:27:57.20:0,57,2853	0/0:28,0:28:75.26:0,75,3701	0/0:21,0:21:57.20:0,57,2549	0/0:25,0:25:51.15:0,51,2257	0/0:14,0:14:27.09:0,27,1226	1/1:2,19:21:45.15:1486,45,0	1/1:2,13:15:24.08:792,24,0	0/0:7,0:7:18.06:0,18,935	0/0:10,0:10:21.07:0,21,981	0/0:22,0:22:57.20:0,57,2697	0/0:21,0:21:42.14:0,42,2194	0/0:20,0:20:39.13:0,39,1879	0/0:18,0:18:45.15:0,45,2391	0/0:23,0:23:51.18:0,51,2746	0/0:14,0:14:36.12:0,36,1825	0/0:26,0:26:63.22:0,63,3386	0/1:3,24:27:89.14:1766,0,89	1/1:3,23:26:57.20:1882,57,0	./.
chr10	23138712	.	G	GTC	535.86	PASS	AB=0.927;AC=15;AF=0.268;AN=56;BaseQRankSum=3.549;DP=636;FS=0.560;HRun=0;HaplotypeScore=222.4998;InbreedingCoeff=-0.1753;MQ=51.51;MQ0=23;MQRankSum=-4.813;QD=1.79;ReadPosRankSum=1.086;VQSLOD=2.1846;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:20:26.72:0,27,188	0/0:13,0:13:23.94:0,24,99	0/1:11,0:3:1.03:1,0,8	0/0:21,0:7:9.35:0,9,120	0/1:37,4:37:19.54:20,0,138	0/1:23,1:24:23:72,0,23	0/1:30,0:30:24.60:25,0,126	0/0:39,0:37:66.23:0,66,444	0/1:13,2:15:16.70:17,0,82	0/0:24,0:22:61.55:0,62,613	0/1:21,0:21:22.41:22,0,127	0/1:11,4:15:47.54:129,0,48	0/1:26,4:29:90.55:144,0,91	0/1:12,1:13:31.82:37,0,32	0/0:30,0:29:43.99:0,44,394	0/0:22,0:22:42.31:0,42,335	0/0:20,0:22:25.11:0,25,110	0/0:22,0:20:40.26:0,40,172	0/0:19,0:17:10.21:0,10,115	0/0:30,0:29:45.53:0,46,188	0/0:31,0:30:50.64:0,51,209	0/1:14,3:15:10.89:112,0,11	0/1:23,3:24:61.20:61,0,77	0/0:20,0:19:21.67:0,22,99	0/1:18,1:18:29.85:30,0,75	0/0:21,0:21:45.02:0,45,343	0/1:29,0:29:6.70:7,0,60	1/1:9,0:9:5.76:15,6,0
chr10	23138718	.	CTG	C	6156.37	PASS	AB=0.938;AC=32;AF=0.571;AN=56;BaseQRankSum=-7.424;DP=649;FS=30.641;HRun=0;HaplotypeScore=204.1188;InbreedingCoeff=-0.1891;MQ=52.63;MQ0=23;MQRankSum=2.753;QD=10.97;ReadPosRankSum=-0.602;VQSLOD=2.7967;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:16,4:19:63.84:98,0,64	1/1:0,13:13:26.86:412,27,0	0/0:14,0:4:12.02:0,12,136	0/0:27,0:10:13.77:0,14,267	0/1:39,1:36:72.62:86,0,73	0/1:23,0:23:10.97:11,0,22	0/1:28,2:30:45:120,0,45	0/1:16,22:36:99:738,0,115	0/1:16,0:16:37.02:44,0,37	0/0:24,0:22:58.62:0,59,762	0/0:22,0:22:31.50:0,32,303	0/1:14,1:15:19.39:19,0,36	0/1:30,1:30:40.12:157,0,40	0/1:12,1:13:13.61:61,0,14	0/1:30,1:30:99:106,0,358	0/1:21,1:22:99:154,0,167	1/1:4,16:20:35.20:516,35,0	1/1:2,21:21:28.64:592,29,0	1/1:2,17:17:48.12:686,48,0	1/1:1,30:30:51.07:779,51,0	1/1:2,29:30:57.19:871,57,0	0/1:16,1:15:11.86:55,0,12	1/1:29,0:27:3.29:106,3,0	0/1:18,1:18:13.05:13,0,17	1/1:21,0:20:4.28:113,4,0	0/1:21,0:21:99:383,0,126	0/1:30,1:31:19.98:20,0,93	0/1:7,0:7:14.99:15,0,46
chr10	23138720	.	G	GTCTCTC	9358.96	PASS	AB=1.000;AC=33;AF=0.589;AN=56;BaseQRankSum=-4.419;DP=654;FS=4.286;HRun=0;HaplotypeScore=227.9490;InbreedingCoeff=-0.3940;MQ=52.87;MQ0=23;MQRankSum=-0.755;QD=15.34;ReadPosRankSum=0.603;VQSLOD=3.5574;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,1:19:21.53:198,22,0	0/1:13,0:13:27.24:272,0,27	0/0:16,0:5:12.02:0,12,136	0/0:28,0:11:17.59:0,18,272	0/1:40,0:36:86.69:87,0,138	0/1:21,0:21:57.70:122,0,58	0/1:31,0:31:86.73:87,0,141	1/1:35,0:33:70.72:849,71,0	0/1:17,0:17:39.96:118,0,40	0/1:25,0:23:99:277,0,266	0/1:23,0:23:61.24:61,0,80	0/1:15,0:15:87.15:340,0,87	0/1:29,0:28:19.88:426,0,20	0/1:12,0:12:22.93:59,0,23	1/1:25,7:31:57.81:1216,58,0	1/1:20,3:23:48.71:793,49,0	0/1:20,0:20:75.18:75,0,154	0/1:23,0:21:99:253,0,106	0/1:18,0:16:99:290,0,99	0/1:30,0:29:67.87:421,0,68	0/1:30,0:29:55.74:513,0,56	0/1:18,0:16:4.36:333,0,4	0/1:29,0:27:12.23:251,0,12	0/1:18,0:17:32.13:32,0,66	0/1:22,0:21:60.85:161,0,61	1/1:0,22:24:68.89:1101,69,0	1/1:4,30:34:23.94:612,24,0	1/1:0,7:7:12.04:410,12,0
chr10	23138722	.	C	CTCTCTCTA	9887.69	PASS	AB=1.000;AC=35;AF=0.625;AN=56;BaseQRankSum=-5.677;DP=668;FS=1.097;HRun=0;HaplotypeScore=251.6235;InbreedingCoeff=0.6549;MQ=53.94;MQ0=22;MQRankSum=-0.470;QD=21.88;ReadPosRankSum=0.517;VQSLOD=3.7695;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:19,0:18:11.51:21,0,12	0/0:13,0:13:8.29:0,8,115	0/0:17,0:6:17.05:0,17,226	0/0:29,0:12:1.65:0,2,298	1/1:38,0:38:51.09:774,51,0	1/1:23,0:24:6.02:238,6,0	1/1:31,0:31:33.53:463,34,0	0/0:36,0:34:7.76:0,8,38	1/1:15,0:17:32.92:533,33,0	1/1:7,20:25:57.08:1222,57,0	1/1:4,19:24:3.01:127,3,0	1/1:11,0:15:27.08:747,27,0	1/1:25,0:28:54.12:1073,54,0	1/1:12,0:13:15.05:256,15,0	1/1:33,0:32:17.77:706,18,0	1/1:22,0:22:4.53:377,5,0	0/0:19,0:19:16.76:0,17,462	0/0:23,0:21:22.05:0,22,439	0/0:17,0:16:22.44:0,22,393	0/0:31,0:30:23.73:0,24,423	0/0:31,0:30:23.71:0,24,373	1/1:14,0:15:30.10:787,30,0	1/1:27,0:28:42.14:865,42,0	1/1:19,0:18:27.01:388,27,0	1/1:22,0:22:35.95:639,36,0	0/1:25,0:25:14.25:187,0,14	0/1:35,0:34:49.44:259,0,49	1/1:7,0:7:12.04:228,12,0
chr10	23138730	.	A	ATC	1884.82	PASS	AB=1.000;AC=18;AF=0.321;AN=56;BaseQRankSum=7.113;DP=711;FS=34.761;HRun=0;HaplotypeScore=232.8877;InbreedingCoeff=0.2156;MQ=55.78;MQ0=20;MQRankSum=-3.400;QD=5.45;ReadPosRankSum=-2.205;VQSLOD=1.5588;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:21,2:22:29.33:261,29,0	0/0:14,0:14:29.91:0,30,360	0/0:28,0:13:32.54:0,33,335	0/0:34,0:16:44.02:0,44,460	0/1:43,0:39:40.27:40,0,448	0/1:26,0:26:28.33:38,0,28	0/0:31,0:31:33.09:0,33,398	0/0:31,0:30:55.88:0,56,630	0/1:18,0:18:8.52:9,0,323	0/1:27,0:26:28.44:28,0,269	0/1:23,0:23:9.43:89,0,9	0/1:19,0:19:49.03:49,0,186	0/1:30,0:29:20.58:21,0,427	0/1:14,0:14:3.37:3,0,189	1/1:29,7:35:64.53:768,65,0	1/1:23,3:26:60.92:667,61,0	0/0:19,0:19:20.74:0,21,347	0/0:24,0:22:43.93:0,44,553	0/0:17,0:16:38.80:0,39,419	0/0:34,0:33:63.18:0,63,768	0/0:29,0:29:59.94:0,60,746	0/1:19,0:17:72.65:73,0,171	0/0:34,0:32:11.37:0,11,485	0/0:23,0:22:26.42:0,26,283	0/0:24,0:23:26.41:0,26,445	0/0:23,0:23:38.74:0,39,490	0/1:36,0:35:0.87:1,0,154	1/1:6,0:6:5.55:15,6,0
chr10	23138731	.	T	TCTCTCTAT	9868.44	PASS	AB=1.000;AC=35;AF=0.625;AN=56;BaseQRankSum=-5.604;DP=713;FS=1.101;HRun=0;HaplotypeScore=261.8700;InbreedingCoeff=0.6570;MQ=55.75;MQ0=21;MQRankSum=0.755;QD=20.52;ReadPosRankSum=0.874;VQSLOD=4.1900;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:22:9.02:27,0,9	0/0:14,0:14:8.29:0,8,115	0/0:28,0:13:17.53:0,18,227	0/0:34,0:16:1.65:0,2,298	1/1:43,0:39:51.09:774,51,0	1/1:10,16:27:6.02:238,6,0	1/1:31,0:31:33.53:463,34,0	0/0:32,0:31:7.76:0,8,38	1/1:17,0:17:32.92:533,33,0	1/1:26,0:25:54.09:1200,54,0	1/1:23,0:23:3.01:127,3,0	1/1:18,0:18:27.08:747,27,0	1/1:30,0:29:54.12:1073,54,0	1/1:14,0:14:15.05:256,15,0	1/1:36,0:35:17.77:706,18,0	1/1:26,0:26:4.53:377,5,0	0/0:18,0:19:16.76:0,17,462	0/0:24,0:22:23.76:0,24,441	0/0:17,0:16:22.44:0,22,393	0/0:34,0:33:23.73:0,24,423	0/0:29,0:29:23.71:0,24,373	1/1:20,0:18:30.10:787,30,0	1/1:33,0:31:42.14:865,42,0	1/1:24,0:23:27.01:388,27,0	1/1:26,0:25:35.95:639,36,0	0/1:23,0:23:16.26:184,0,16	0/1:35,0:34:49.44:259,0,49	1/1:6,0:6:12.04:228,12,0
chr10	23138732	.	C	CTCTCTA	3532.82	PASS	AB=0.991;AC=20;AF=0.357;AN=56;BaseQRankSum=1.111;DP=719;FS=49.562;HRun=0;HaplotypeScore=262.8590;InbreedingCoeff=-0.3717;MQ=56.56;MQ0=21;MQRankSum=-5.286;QD=7.28;ReadPosRankSum=-1.434;VQSLOD=1.2396;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:23:1.93:2,0,166	0/0:14,0:14:32.80:0,33,405	0/0:31,0:14:33.49:0,33,584	0/0:36,0:18:31.22:0,31,609	0/1:42,0:38:99:259,0,186	0/1:27,0:27:61.82:141,0,62	0/1:32,0:32:19:19,0,113	0/0:31,0:30:65.83:0,66,692	0/1:17,0:17:99:104,0,116	0/1:29,0:28:3.31:494,0,3	0/1:23,0:23:40.47:73,0,40	0/1:17,0:17:99:349,0,158	0/1:30,0:29:99:290,0,148	0/1:16,0:16:60.30:60,0,100	0/1:35,0:34:99:370,0,170	0/1:26,0:26:99:217,0,215	0/0:18,0:18:20.39:0,20,564	0/0:24,0:22:50.49:0,50,736	0/0:17,0:16:2.02:0,2,565	0/0:34,0:33:65.94:0,66,985	0/0:29,0:29:62.69:0,63,879	0/1:20,0:18:50.58:371,0,51	0/1:27,6:31:99:144,0,199	0/1:24,0:23:99:108,0,129	0/1:27,0:26:50.23:50,0,156	0/1:23,0:23:64.77:65,0,439	0/1:34,0:33:99:233,0,289	1/1:6,0:6:12.04:186,12,0
chr10	23139070	.	TACACACACAC	T	6262.74	PASS	AB=0.920;AC=40;AF=0.833;AN=48;BaseQRankSum=1.718;DP=555;FS=3.391;HRun=0;HaplotypeScore=183.5833;InbreedingCoeff=0.1907;MQ=52.27;MQ0=26;MQRankSum=-4.452;QD=15.81;ReadPosRankSum=2.254;VQSLOD=3.8067;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:34:31.63:0,32,1407	1/1:2,0:8:12.02:119,12,0	./.	./.	1/1:10,5:15:6.02:179,6,0	1/1:12,6:20:21.07:586,21,0	1/1:11,7:19:17.91:517,18,0	./.	1/1:6,6:12:15.05:447,15,0	0/1:15,3:18:88.18:330,0,88	1/1:11,5:17:11.25:275,11,0	1/1:12,6:19:12.12:338,12,0	1/1:5,8:13:21.07:606,21,0	1/1:8,5:13:9.03:249,9,0	0/1:28,0:27:22.20:22,0,130	0/1:18,0:16:17.74:18,0,95	1/1:9,0:11:6.01:59,6,0	0/1:7,0:8:17.69:18,0,276	1/1:15,0:16:3:30,3,0	1/1:18,0:23:4.26:42,4,0	1/1:16,1:18:3.87:91,4,0	1/1:6,8:14:12.04:357,12,0	1/1:15,5:19:9.03:268,9,0	0/0:15,5:21:3.01:0,3,96	1/1:11,5:16:9.03:248,9,0	1/1:21,0:30:21.04:414,21,0	1/1:15,0:32:45.63:1048,46,0	./.
chr10	23139114	.	C	CT	304.59	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=0.393;DP=590;FS=5.373;HRun=9;HaplotypeScore=141.6816;InbreedingCoeff=0.8263;MQ=59.25;MQ0=15;MQRankSum=0.817;QD=10.50;ReadPosRankSum=-2.344;VQSLOD=1.3388;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:18,11:27:36.57:399,37,0	0/0:12,0:12:29.86:0,30,234	0/0:21,0:14:30.97:0,31,269	0/0:21,0:9:17.70:0,18,135	0/0:22,0:22:37.82:0,38,331	0/0:27,0:27:41.80:0,42,375	0/0:17,0:16:28.89:0,29,223	0/0:28,0:26:74.98:0,75,650	0/0:16,0:16:41.83:0,42,330	0/0:29,0:27:74.92:0,75,634	0/0:14,0:14:16.84:0,17,138	0/0:24,0:24:47.83:0,48,391	0/0:18,0:17:41.80:0,42,326	0/0:14,0:14:29.87:0,30,238	0/0:24,0:23:9.65:0,10,46	0/0:23,0:23:7.62:0,8,25	0/0:16,0:16:47.94:0,48,405	0/0:14,0:13:35.92:0,36,299	0/0:28,1:27:26.75:0,27,455	0/0:25,0:25:49.95:0,50,432	0/0:15,0:14:29.65:0,30,254	0/0:26,0:26:35.43:0,35,300	0/0:19,0:19:32.57:0,33,269	0/0:23,0:23:12.86:0,13,125	0/0:21,0:21:35.86:0,36,306	0/0:26,0:26:71.80:0,72,589	0/0:30,0:30:65.27:0,65,483	0/0:6,0:5:11.99:0,12,104
chr10	23139237	.	C	CA	11743.09	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-16.114;DP=693;FS=12.460;HRun=2;HaplotypeScore=84.6094;InbreedingCoeff=0.9932;MQ=79.83;MQ0=0;MQRankSum=-0.565;QD=38.63;ReadPosRankSum=3.814;VQSLOD=4.3243;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,120,1486	0/0:16,0:16:45.14:0,45,558	0/0:25,0:25:66.19:0,66,801	0/0:24,0:24:66.07:0,66,756	1/1:1,34:35:99:1445,102,0	1/1:0,27:27:75.25:1079,75,0	1/1:1,16:17:33.05:434,33,0	0/0:30,0:30:81.18:0,81,942	1/1:0,15:15:45.12:625,45,0	1/1:0,29:29:87.25:1210,87,0	1/1:0,18:18:54.18:777,54,0	1/1:0,30:30:81.27:1165,81,0	1/1:1,14:15:36.12:518,36,0	1/1:0,23:23:69.20:970,69,0	0/0:22,0:21:66.17:0,66,791	0/0:20,0:20:57.18:0,57,706	0/0:25,0:25:75.19:0,75,912	0/0:23,0:23:66.21:0,66,817	0/0:19,0:19:57.15:0,57,682	0/0:32,0:32:96.30:0,96,1188	0/0:27,0:27:75.24:0,75,929	1/1:0,24:24:57.19:820,57,0	1/1:0,34:34:93.27:1316,93,0	1/1:1,16:17:45.15:648,45,0	1/1:1,19:20:51.17:734,51,0	0/0:30,2:32:9.83:0,10,990	0/0:35,0:35:99:0,105,1275	0/0:12,0:12:36.11:0,36,446
chr10	23140509	.	CA	C	3145.24	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-1.160;DP=754;FS=0.000;HRun=3;HaplotypeScore=100.0739;InbreedingCoeff=0.9444;MQ=84.44;MQ0=2;MQRankSum=-0.789;QD=32.43;ReadPosRankSum=-2.001;VQSLOD=2.6451;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,157,2226	0/0:12,0:12:33.11:0,33,475	0/0:21,0:22:2.49:0,2,504	0/0:26,0:26:52.49:0,52,622	0/0:35,0:35:99:0,99,1418	0/0:25,0:25:69.23:0,69,994	0/0:20,0:20:60.18:0,60,845	1/1:0,30:30:87.24:1051,87,0	0/0:19,0:19:57.19:0,57,820	0/0:31,0:31:93.31:0,93,1325	0/0:23,0:23:66.22:0,66,942	0/0:33,0:33:96.31:0,96,1356	0/0:31,0:31:87.26:0,87,1216	0/0:41,0:41:99:0,120,1727	0/0:32,0:32:90.29:0,90,1275	0/0:29,0:28:84.28:0,84,1210	0/0:36,0:36:99:0,105,1512	0/0:18,0:16:48.14:0,48,666	0/0:17,0:17:51.15:0,51,715	0/0:28,0:28:84.27:0,84,1192	0/0:26,0:26:78.25:0,78,1106	0/0:24,0:24:66.22:0,66,951	0/0:26,0:26:78.25:0,78,1107	0/0:22,0:22:63.21:0,63,903	0/0:28,0:28:84.27:0,84,1188	1/1:3,31:34:15.88:1100,16,0	1/1:2,24:26:72.23:892,72,0	1/1:0,7:7:21.07:260,21,0
chr10	23140797	.	AT	A	11090	PASS	AB=0.988;AC=29;AF=0.518;AN=56;BaseQRankSum=4.213;DP=625;FS=0.297;HRun=1;HaplotypeScore=136.3048;InbreedingCoeff=0.7776;MQ=75.39;MQ0=0;MQRankSum=-1.865;QD=29.26;ReadPosRankSum=3.283;VQSLOD=4.6814;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:27.56:0,28,176	0/0:13,0:13:39.08:0,39,539	0/0:14,0:14:42.11:0,42,574	0/0:14,0:14:21.70:0,22,503	1/1:0,37:37:99:1461,108,0	1/1:0,38:38:93.31:1297,93,0	1/1:0,16:16:42.14:586,42,0	0/1:35,0:35:61.19:61,0,144	1/1:0,18:18:48.16:670,48,0	1/1:0,29:29:87.27:1176,87,0	1/1:0,14:14:42.10:561,42,0	1/1:0,17:17:51.17:712,51,0	1/1:0,24:24:60.20:831,60,0	1/1:0,22:22:54.18:753,54,0	0/1:20,0:20:21.78:22,0,93	0/0:30,0:30:67.54:0,68,243	0/0:27,0:27:81.12:0,81,1126	0/0:14,0:14:42.14:0,42,622	0/0:17,0:17:51.14:0,51,692	0/0:46,0:46:99:0,132,1905	0/0:11,0:11:33.11:0,33,492	1/1:0,23:23:63.08:835,63,0	1/1:0,27:27:68.91:961,69,0	1/1:0,6:6:15.05:209,15,0	1/1:0,26:26:66.22:922,66,0	0/1:26,1:27:34.12:34,0,147	0/0:33,1:34:23.72:0,24,251	0/0:4,0:4:11.09:0,11,55
chr10	23141162	.	TGCCC	T	21265.88	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=18.059;DP=838;FS=7.101;HRun=0;HaplotypeScore=147.7956;InbreedingCoeff=0.9627;MQ=78.81;MQ0=2;MQRankSum=-6.198;QD=53.03;ReadPosRankSum=3.304;VQSLOD=6.1463;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,43:43:99:2071,102,0	1/1:0,13:13:39.13:818,39,0	0/0:26,0:26:75.25:0,75,2052	0/0:23,0:23:66.19:0,66,1752	0/0:25,0:25:75.26:0,75,2118	0/0:26,0:26:75.24:0,75,2110	0/0:27,0:27:81.28:0,81,2249	1/1:0,33:33:99:2073,99,0	0/0:40,0:40:99:0,120,3416	0/0:28,0:28:84.29:0,84,2382	0/0:17,0:17:51.18:0,51,1405	0/0:37,0:37:99:0,111,3217	0/0:31,0:31:93.31:0,93,2621	0/0:36,0:36:99:0,108,3105	1/1:0,48:48:99:2579,123,0	1/1:0,36:35:87.28:1824,87,0	1/1:0,25:25:66.70:1375,67,0	1/1:0,11:11:27.09:543,27,0	1/1:0,24:24:69.22:1391,69,0	1/1:0,45:45:99:2451,123,0	1/1:0,38:38:90.27:1846,90,0	0/0:27,0:27:81.28:0,81,2336	0/0:34,0:34:99:0,102,2944	0/0:27,0:27:78.23:0,78,2191	0/0:33,0:33:99:0,99,2869	1/1:2,43:45:1.69:2533,2,0	1/1:0,35:34:75.26:1573,75,0	1/1:0,5:5:9.03:189,9,0
chr10	23141774	.	CCAG	C	1083.56	PASS	AB=1.000;AC=10;AF=0.179;AN=56;BaseQRankSum=8.811;DP=614;FS=1.001;HRun=0;HaplotypeScore=102.4792;InbreedingCoeff=0.7838;MQ=89.02;MQ0=0;MQRankSum=-1.792;QD=11.53;ReadPosRankSum=0.313;VQSLOD=3.1604;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:41.96:0,42,560	1/1:6,0:6:5.94:150,6,0	0/0:26,0:26:62.45:0,62,1230	0/0:20,0:20:49.80:0,50,830	0/0:26,0:26:72.23:0,72,1590	0/0:27,0:27:78.25:0,78,1667	0/0:19,0:19:54.19:0,54,1206	0/0:25,0:25:75.26:0,75,1671	0/0:20,0:20:60.21:0,60,1352	0/0:26,0:26:72.23:0,72,1528	0/0:27,0:27:75.26:0,75,1665	0/0:26,0:26:72.21:0,72,1479	0/0:20,0:20:57.20:0,57,1306	0/0:37,0:37:99:0,99,2191	0/0:26,0:26:69.24:0,69,1526	0/0:30,0:30:87.25:0,87,1795	1/1:14,0:14:27.21:172,27,0	0/1:5,0:5:1.38:53,0,1	1/1:22,2:24:21.08:428,21,0	0/1:23,0:23:29.12:108,0,29	1/1:20,2:22:28.39:335,28,0	0/0:26,0:26:78.25:0,78,1679	0/0:22,0:22:63.22:0,63,1363	0/0:25,0:25:72.25:0,72,1592	0/0:12,0:12:36.12:0,36,828	0/0:22,0:22:66.09:0,66,1444	0/0:23,0:23:66.21:0,66,1436	0/0:6,0:6:18.06:0,18,415
chr10	23142145	.	AT	A	15965.74	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=1.828;DP=586;FS=4.630;HRun=6;HaplotypeScore=74.6714;InbreedingCoeff=0.9875;MQ=74.60;MQ0=0;MQRankSum=-6.473;QD=28.41;ReadPosRankSum=5.737;VQSLOD=5.2130;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,17:18:48.12:516,48,0	1/1:2,8:10:21.05:225,21,0	0/0:15,0:14:39.02:0,39,455	0/0:8,0:9:14.29:0,14,124	1/1:1,27:28:81.08:842,81,0	1/1:1,29:30:81.20:870,81,0	1/1:1,16:17:45.10:477,45,0	1/1:5,36:41:99:1152,108,0	1/1:0,15:15:36.09:387,36,0	1/1:2,14:16:42.11:451,42,0	1/1:0,22:22:57.14:612,57,0	1/1:3,15:18:39.10:419,39,0	1/1:0,14:14:42.11:451,42,0	1/1:0,23:23:63.16:677,63,0	1/1:1,26:27:72.18:773,72,0	1/1:3,24:27:63.16:677,63,0	1/1:3,26:29:72.18:773,72,0	1/1:2,12:14:36.09:386,36,0	1/1:3,20:23:60.11:622,60,0	1/1:1,26:27:75.19:805,75,0	1/1:1,19:20:57.14:612,57,0	1/1:2,13:15:39.10:419,39,0	1/1:3,22:25:69.17:741,69,0	1/1:1,12:13:33.08:355,33,0	1/1:0,18:18:51.09:535,51,0	1/1:1,27:28:81.20:870,81,0	1/1:0,32:32:93.23:999,93,0	1/1:0,12:12:30.08:322,30,0
chr10	23142531	.	ATAAG	A	3132.52	PASS	AB=0.773;AC=8;AF=0.143;AN=56;BaseQRankSum=10.076;DP=444;FS=13.121;HRun=0;HaplotypeScore=81.6070;InbreedingCoeff=0.6762;MQ=79.80;MQ0=0;MQRankSum=-4.477;QD=40.68;ReadPosRankSum=-1.053;VQSLOD=3.0357;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:69.24:0,69,1799	0/0:7,0:7:18.06:0,18,480	0/0:15,0:15:42:0,42,730	0/1:9,0:9:10.92:11,0,179	0/0:20,0:20:60.21:0,60,1581	0/0:19,0:19:57.20:0,57,1491	0/0:13,0:13:36.10:0,36,901	1/1:2,27:29:81.25:1423,81,0	0/0:14,0:14:39.13:0,39,1037	0/0:22,0:22:66.23:0,66,1745	0/0:24,0:24:72.25:0,72,1812	0/0:13,0:13:39.13:0,39,1013	0/0:19,0:19:57.20:0,57,1439	0/0:18,0:18:51.18:0,51,1318	0/0:19,0:19:54.18:0,54,1356	0/0:10,0:10:30.10:0,30,789	0/0:9,0:9:24.08:0,24,639	0/0:19,0:19:54.19:0,54,1438	0/0:14,0:14:39.13:0,39,1007	0/0:24,0:24:66.23:0,66,1732	0/0:7,0:7:18.06:0,18,480	0/0:8,0:8:24.08:0,24,605	0/0:14,0:14:36.12:0,36,952	0/0:17,0:17:39.13:0,39,995	0/0:15,0:15:45.15:0,45,1181	0/1:3,15:18:99:726,0,112	1/1:1,18:19:54.19:1007,54,0	1/1:0,2:2:6.02:112,6,0
chr10	23143376	.	A	AAAC	38133.81	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-7.448;DP=715;FS=5.211;HRun=0;HaplotypeScore=82.1906;InbreedingCoeff=0.9150;MQ=71.25;MQ0=0;MQRankSum=-8.825;QD=56.24;ReadPosRankSum=5.713;VQSLOD=6.8314;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,28:31:74.92:1563,75,0	1/1:1,9:10:24.08:545,24,0	0/0:22,0:22:66.20:0,66,1000	0/0:15,0:15:39.13:0,39,644	1/1:0,31:31:93.31:2028,93,0	1/1:5,39:43:85.84:1912,86,0	1/1:0,22:22:57.20:1294,57,0	1/1:7,32:39:99:2185,108,0	1/1:1,26:28:72.25:1635,72,0	1/1:1,21:23:63.21:1376,63,0	1/1:0,34:34:99:2115,99,0	1/1:1,26:28:78.27:1742,78,0	1/1:1,35:36:81.75:1839,82,0	1/1:0,21:22:57.20:1294,57,0	1/1:1,38:40:99:2383,105,0	1/1:0,21:21:54.19:1227,54,0	1/1:2,14:16:45.15:985,45,0	1/1:3,11:15:26.35:661,26,0	1/1:5,31:36:99:2114,102,0	1/1:0,34:34:90.30:1959,90,0	1/1:1,18:20:48.16:1090,48,0	1/1:0,19:19:51.18:1158,51,0	1/1:3,21:25:66.22:1477,66,0	1/1:1,13:14:36.12:787,36,0	1/1:0,18:19:36.12:818,36,0	1/1:2,27:29:84.26:1767,84,0	1/1:0,33:31:93.32:2111,93,0	1/1:0,4:4:3.01:68,3,0
chr10	23144039	.	C	CAT	6576.26	PASS	AB=0.830;AC=45;AF=0.804;AN=56;BaseQRankSum=4.935;DP=572;FS=6.043;HRun=0;HaplotypeScore=133.3464;InbreedingCoeff=0.3576;MQ=58.88;MQ0=4;MQRankSum=1.601;QD=13.15;ReadPosRankSum=8.061;VQSLOD=3.3896;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:26:30.03:218,30,0	1/1:12,0:12:10.22:63,10,0	0/0:18,0:16:45.01:0,45,453	0/0:29,0:21:59.94:0,60,577	1/1:18,0:17:28.71:220,29,0	1/1:16,0:16:26.66:282,27,0	1/1:20,0:20:31.45:266,31,0	0/1:42,0:41:14.33:548,0,14	1/1:16,0:16:3.41:240,3,0	1/1:20,0:20:7.31:306,7,0	1/1:25,0:25:46.87:455,47,0	1/1:19,0:19:18.50:364,19,0	1/1:21,0:21:42.02:418,42,0	0/0:6,19:25:7.77:0,8,32	0/1:9,22:31:36.44:36,0,78	0/1:29,0:29:3.20:337,0,3	1/1:19,0:19:2.97:129,3,0	0/1:3,10:13:11.50:37,0,11	1/1:12,0:11:15.05:184,15,0	1/1:19,0:19:52.20:454,52,0	1/1:17,0:17:17.43:220,17,0	1/1:22,0:22:38.79:350,39,0	1/1:14,0:14:13.25:247,13,0	1/1:24,0:24:22.90:307,23,0	1/1:23,0:23:48.05:393,48,0	0/1:21,0:20:2.52:255,0,3	1/1:15,0:15:6.19:184,6,0	1/1:4,1:4:2.51:61,3,0
chr10	23144066	.	ACACACACACGCACACACG	A	4245.56	PASS	AB=1.000;AC=33;AF=0.589;AN=56;BaseQRankSum=-13.375;DP=576;FS=9.627;HRun=0;HaplotypeScore=279.9300;InbreedingCoeff=-0.5918;MQ=49.54;MQ0=7;MQRankSum=0.363;QD=7.61;ReadPosRankSum=-13.358;VQSLOD=-0.3146;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:22:3.72:52,4,0	1/1:1,10:11:6.02:193,6,0	0/1:7,0:4:5.98:6,0,36	0/0:18,0:12:20.26:0,20,268	0/1:27,0:26:97.98:98,0,1174	0/1:24,0:24:76.66:77,0,1324	0/1:23,0:23:99:242,0,299	0/1:27,0:26:99:342,0,122	0/1:22,0:22:99:189,0,1120	0/1:21,0:21:99:172,0,1125	0/1:20,0:20:85.09:85,0,1114	0/1:25,0:25:82.16:82,0,1240	0/1:21,0:21:74.19:74,0,793	0/1:22,0:22:22.36:22,0,480	0/1:26,0:26:99:154,0,1015	0/1:32,0:32:99:148,0,1011	1/1:3,16:19:0.34:147,0,0	1/1:14,0:14:12.47:157,12,0	1/1:6,0:6:12.03:178,12,0	1/1:20,0:19:32.69:510,33,0	0/1:21,0:21:99:358,0,181	0/1:26,0:26:99:201,0,679	0/1:17,0:17:99:104,0,1075	0/1:28,0:28:99:131,0,1507	0/1:24,0:24:99:268,0,1249	0/1:25,0:24:99:160,0,948	0/1:18,0:16:61.31:61,0,554	0/1:9,0:8:34.72:35,0,355
chr10	23144074	.	ACG	A	6982.65	PASS	AB=1.000;AC=50;AF=0.893;AN=56;BaseQRankSum=-5.850;DP=551;FS=15.499;HRun=0;HaplotypeScore=138.6274;InbreedingCoeff=-0.1097;MQ=53.00;MQ0=6;MQRankSum=1.038;QD=12.67;ReadPosRankSum=-3.520;VQSLOD=2.8910;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:13,0:13:13.18:17,0,13	1/1:10,0:10:5.86:37,6,0	0/1:9,0:4:10.07:32,0,10	0/1:24,0:18:21.50:21,0,160	1/1:25,0:24:36.76:340,37,0	1/1:22,0:22:39.09:397,39,0	1/1:23,1:24:31.28:281,31,0	1/1:22,0:21:46.03:341,46,0	1/1:20,2:22:41.72:391,42,0	1/1:21,0:21:44.55:422,45,0	1/1:21,0:21:18.23:306,18,0	1/1:23,1:24:53.28:447,53,0	0/1:20,0:20:1.78:237,0,2	1/1:25,0:25:6.11:196,6,0	0/1:26,0:26:13.28:169,0,13	1/1:30,0:30:36.26:354,36,0	1/1:19,0:19:6.32:35,6,0	1/1:11,0:11:14.89:111,15,0	1/1:7,0:7:17.99:157,18,0	1/1:21,0:20:36.20:291,36,0	0/1:23,0:23:6.71:227,0,7	1/1:21,0:21:47.72:376,48,0	1/1:16,0:16:41.98:355,42,0	1/1:25,0:25:51.05:428,51,0	1/1:24,0:24:24.35:324,24,0	1/1:22,0:21:24.50:381,25,0	1/1:16,0:14:18.41:212,18,0	1/1:8,0:7:13.97:97,14,0
chr10	23144179	.	TA	T	21992	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=4.724;DP=700;FS=9.791;HRun=3;HaplotypeScore=100.8665;InbreedingCoeff=0.9155;MQ=93.04;MQ0=0;MQRankSum=-12.041;QD=34.36;ReadPosRankSum=7.075;VQSLOD=3.8052;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,28:28:78.25:965,78,0	1/1:0,8:8:24.08:297,24,0	0/0:30,0:30:74.81:0,75,1113	0/0:30,0:30:75.17:0,75,1024	1/1:0,17:17:51.16:632,51,0	1/1:1,29:30:81.25:1004,81,0	1/1:1,34:35:93.29:1151,93,0	1/1:0,27:27:78.17:921,78,0	1/1:1,26:27:75.24:929,75,0	1/1:1,23:24:69.22:854,69,0	1/1:0,19:19:57.14:689,57,0	1/1:0,23:23:63.20:781,63,0	1/1:0,33:33:87.07:1059,87,0	1/1:0,35:35:99:1226,99,0	1/1:0,39:39:99:1375,111,0	1/1:1,26:27:75.24:929,75,0	1/1:0,17:17:51.16:632,51,0	1/1:0,10:10:30.09:371,30,0	1/1:2,15:17:45.14:556,45,0	1/1:0,22:22:63.20:781,63,0	1/1:0,40:40:99:1339,108,0	1/1:1,28:29:72.23:891,72,0	1/1:0,23:23:66.21:818,66,0	1/1:0,32:32:87.27:1077,87,0	1/1:1,20:21:60.19:744,60,0	1/1:2,26:28:78.24:966,78,0	1/1:0,28:28:78.25:967,78,0	1/1:0,1:1:3.01:37,3,0
chr10	23145350	.	TA	T	18577.18	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-3.008;DP=583;FS=1.684;HRun=3;HaplotypeScore=91.1239;InbreedingCoeff=0.9913;MQ=77.67;MQ0=0;MQRankSum=-8.282;QD=33.72;ReadPosRankSum=6.440;VQSLOD=4.6761;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,15:15:39.12:483,39,0	1/1:0,8:8:24.08:298,24,0	0/0:15,0:15:35.41:0,35,417	0/0:17,0:17:36.08:0,36,451	1/1:1,15:16:45.14:558,45,0	1/1:1,29:30:78.25:966,78,0	1/1:0,17:17:45.14:558,45,0	1/1:0,42:42:99:1448,120,0	1/1:1,32:33:90.28:1115,90,0	1/1:1,20:21:57.18:707,57,0	1/1:1,16:17:48.15:594,48,0	1/1:0,29:29:81.25:1004,81,0	1/1:3,33:36:93.29:1152,93,0	1/1:1,32:33:81.25:1004,81,0	1/1:1,39:40:99:1338,108,0	1/1:0,25:25:69.22:851,69,0	1/1:0,24:24:72.23:890,72,0	1/1:0,13:13:36.11:446,36,0	1/1:0,13:13:39.12:483,39,0	1/1:0,23:23:63.20:781,63,0	1/1:0,15:15:42.13:521,42,0	1/1:0,8:8:21.07:259,21,0	1/1:0,13:13:36.11:446,36,0	1/1:1,9:10:18.06:223,18,0	1/1:0,15:15:42.13:521,42,0	1/1:0,16:16:48.15:594,48,0	1/1:0,29:29:84.26:1041,84,0	1/1:0,10:10:24.08:298,24,0
chr10	23145515	.	ATGTTACTGT	A	27803.86	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=4.834;DP=500;FS=0.000;HRun=0;HaplotypeScore=226.4662;InbreedingCoeff=0.8054;MQ=61.77;MQ0=0;MQRankSum=-6.530;QD=58.17;ReadPosRankSum=4.180;VQSLOD=4.4455;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,9:15:21.07:546,21,0	1/1:1,9:10:24.08:703,24,0	0/0:13,0:13:21.70:0,22,1021	0/0:9,0:9:18.06:0,18,763	1/1:3,30:33:78.27:2225,78,0	1/1:3,16:19:54.19:1568,54,0	1/1:4,5:9:15.05:439,15,0	1/1:12,22:33:62.84:1077,63,0	1/1:1,12:13:36.12:1054,36,0	1/1:5,16:20:48.16:1376,48,0	1/1:11,16:27:48.16:1392,48,0	1/1:1,11:12:33.11:966,33,0	1/1:8,15:23:51.18:1442,51,0	1/1:8,11:18:30.10:877,30,0	1/1:5,13:18:39.13:1138,39,0	1/1:10,15:25:48.16:1394,48,0	1/1:7,6:13:15.05:426,15,0	1/1:3,3:6:6.02:176,6,0	1/1:6,6:12:24.05:577,24,0	1/1:5,23:28:72.25:2093,72,0	1/1:3,3:6:9.03:264,9,0	1/1:6,13:20:45.14:1247,45,0	1/1:8,23:31:75.21:1981,75,0	1/1:1,3:4:3.01:88,3,0	1/1:6,20:26:63.22:1834,63,0	1/1:9,15:24:45.07:1074,45,0	1/1:2,22:24:54.19:1581,54,0	1/1:0,5:5:9.03:264,9,0
chr10	23145586	.	A	AT	13142.32	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=0.587;DP=567;FS=0.917;HRun=8;HaplotypeScore=148.7214;InbreedingCoeff=0.9487;MQ=66.78;MQ0=0;MQRankSum=-2.857;QD=28.88;ReadPosRankSum=6.039;VQSLOD=2.8581;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,22:24:41.62:609,42,0	1/1:1,3:4:9.03:104,9,0	0/0:20,0:20:32.95:0,33,292	0/0:13,0:13:30.01:0,30,270	1/1:3,36:39:99:1200,105,0	1/1:2,14:16:42.09:471,42,0	1/1:1,13:14:39.12:450,39,0	0/0:39,0:39:86.99:0,87,779	1/1:7,14:21:45.13:513,45,0	1/1:5,25:29:75.20:854,75,0	1/1:3,21:24:63.19:723,63,0	1/1:5,20:25:63.18:720,63,0	1/1:2,24:26:72.21:830,72,0	1/1:1,9:10:27.08:311,27,0	1/1:5,21:26:63.18:719,63,0	1/1:5,23:28:69.20:795,69,0	1/1:0,20:20:54.16:623,54,0	1/1:2,9:11:27.01:295,27,0	1/1:3,12:15:36.11:415,36,0	1/1:2,27:29:57.31:905,57,0	1/1:0,8:8:21.06:242,21,0	1/1:2,16:18:45.13:513,45,0	1/1:5,25:30:72.17:813,72,0	1/1:1,8:9:21.06:242,21,0	1/1:4,24:28:69.20:794,69,0	0/0:18,1:19:19.44:0,19,432	0/0:19,0:20:41.01:0,41,353	0/0:1,0:1:3:0,3,27
chr10	23145868	.	AATT	A	3169.30	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=2.291;DP=510;FS=4.265;HRun=0;HaplotypeScore=127.2328;InbreedingCoeff=0.9859;MQ=78.87;MQ0=0;MQRankSum=-4.143;QD=37.29;ReadPosRankSum=-0.270;VQSLOD=4.5215;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:33.11:0,33,712	0/0:7,0:7:18.06:0,18,398	0/0:17,0:17:45.15:0,45,894	0/0:15,0:15:36.08:0,36,661	0/0:27,0:27:66.23:0,66,1456	0/0:21,0:21:54.17:0,54,1151	0/0:15,0:15:45.15:0,45,945	1/1:7,22:29:66.20:1015,66,0	0/0:12,0:12:36.12:0,36,794	0/0:29,0:29:78.27:0,78,1703	0/0:17,0:17:42.14:0,42,912	0/0:15,0:15:45.15:0,45,993	0/0:22,0:22:63.21:0,63,1337	0/0:16,0:16:48.16:0,48,1040	0/0:12,0:12:36.10:0,36,714	0/0:22,0:22:57.19:0,57,1215	0/0:23,0:23:60.19:0,60,1274	0/0:10,0:10:30.10:0,30,654	0/0:20,0:20:54.17:0,54,1099	0/0:29,0:29:78.27:0,78,1721	0/0:16,0:16:48.15:0,48,1014	0/0:13,0:13:36.12:0,36,794	0/0:25,0:25:60.21:0,60,1306	0/0:7,0:7:18.06:0,18,397	0/0:21,0:21:63.22:0,63,1390	1/1:2,30:32:24.03:1272,24,0	1/1:0,20:20:54.18:847,54,0	1/1:0,4:4:12.04:192,12,0
chr10	23148126	.	GA	G	22204.23	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-2.158;DP=782;FS=0.732;HRun=5;HaplotypeScore=78.4808;InbreedingCoeff=0.9804;MQ=75.68;MQ0=0;MQRankSum=-8.164;QD=29.65;ReadPosRankSum=3.681;VQSLOD=5.4064;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,24:25:66.19:749,66,0	1/1:2,16:16:42.12:476,42,0	0/0:18,0:18:41.28:0,41,516	0/0:15,0:15:36.11:0,36,454	1/1:2,43:43:99:1327,117,0	1/1:5,31:36:93.26:1055,93,0	1/1:1,24:25:72.21:817,72,0	1/1:1,47:48:99:1500,138,0	1/1:3,28:31:84.24:952,84,0	1/1:3,28:31:84.24:949,84,0	1/1:1,23:22:57.16:646,57,0	1/1:0,26:26:66.19:749,66,0	1/1:3,32:35:96.27:1089,96,0	1/1:2,30:32:87.25:987,87,0	1/1:0,38:38:99:1225,108,0	1/1:1,31:32:87.25:987,87,0	1/1:1,19:20:51.15:579,51,0	1/1:4,7:11:11:225,11,0	1/1:0,19:19:57.16:646,57,0	1/1:1,30:30:81.23:918,81,0	1/1:4,23:27:54.15:613,54,0	1/1:2,24:26:66.19:748,66,0	1/1:0,31:28:72.08:816,72,0	1/1:2,29:31:72.21:817,72,0	1/1:0,19:16:42.12:476,42,0	1/1:0,33:33:99:1122,99,0	1/1:0,39:39:99:1293,114,0	1/1:1,15:16:39.11:442,39,0
chr10	23149727	.	A	AT	3827.85	PASS	AB=0.986;AC=43;AF=0.796;AN=54;BaseQRankSum=-5.423;DP=404;FS=30.852;HRun=0;HaplotypeScore=45.7531;InbreedingCoeff=0.1596;MQ=69.13;MQ0=7;MQRankSum=2.134;QD=10.40;ReadPosRankSum=3.942;VQSLOD=1.5294;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,26:32:39.04:430,39,0	0/1:5,0:5:1.12:52,0,1	0/0:23,0:11:17.03:0,17,158	0/0:13,0:7:3.22:0,3,35	1/1:0,1:22:14.32:121,14,0	1/1:3,0:16:5.61:35,6,0	1/1:2,0:12:11.49:83,11,0	1/1:26,0:25:62.88:454,63,0	0/1:8,0:8:9.54:66,0,10	1/1:2,0:14:32.48:243,32,0	1/1:3,0:15:20.58:130,21,0	1/1:8,0:8:16.31:112,16,0	0/1:11,0:11:20.11:122,0,20	0/1:10,0:10:26.09:68,0,26	0/1:8,0:8:33.69:56,0,34	0/1:13,0:13:69.83:72,0,70	1/1:4,24:29:23.20:199,23,0	1/1:2,12:14:12.02:128,12,0	1/1:2,9:13:26.23:242,26,0	1/1:5,14:17:40.21:347,40,0	1/1:8,0:8:16.32:90,16,0	./.	0/1:3,0:3:7.52:12,0,8	1/1:8,0:7:16.79:111,17,0	1/1:2,1:27:14.75:110,15,0	1/1:14,1:15:25.88:227,26,0	1/1:18,1:19:20.54:232,21,0	1/1:9,0:8:14.81:86,15,0
chr10	23149855	.	A	AT	1035.61	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=-5.746;DP=488;FS=5.116;HRun=9;HaplotypeScore=48.2704;InbreedingCoeff=0.6223;MQ=71.51;MQ0=0;MQRankSum=-1.707;QD=19.54;ReadPosRankSum=2.118;VQSLOD=4.1595;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:40.54:0,41,362	0/0:8,0:8:20.99:0,21,182	0/1:10,0:10:0.02:0,0,63	0/0:9,0:9:17.93:0,18,144	0/0:28,0:28:77.98:0,78,677	0/0:27,0:27:71.97:0,72,625	0/0:10,0:10:26.99:0,27,234	0/0:25,0:25:59.96:0,60,518	0/0:12,0:12:29.99:0,30,260	0/0:20,2:22:1.20:0,1,387	0/0:19,0:19:50.96:0,51,439	0/0:16,0:16:41.97:0,42,360	0/0:20,0:20:50.95:0,51,438	0/0:14,0:14:29.96:0,30,254	1/1:0,23:22:60.16:664,60,0	1/1:3,17:20:2.05:479,2,0	0/0:22,0:22:62.98:0,63,546	0/0:13,2:15:2.76:0,3,241	0/0:10,0:10:29.99:0,30,260	0/0:18,0:18:41.99:0,42,365	0/0:13,0:13:32.99:0,33,286	0/0:11,0:11:23.99:0,24,208	0/0:14,0:14:35.98:0,36,313	0/0:12,0:12:35.99:0,36,312	0/0:23,0:23:62.99:0,63,547	0/0:26,0:26:59.98:0,60,521	0/0:30,0:30:86.96:0,87,751	0/0:12,0:12:26.99:0,27,234
chr10	23150602	.	GC	G	1597.16	PASS	AB=0.974;AC=10;AF=0.179;AN=56;BaseQRankSum=6.112;DP=429;FS=20.310;HRun=1;HaplotypeScore=93.9220;InbreedingCoeff=0.4783;MQ=83.16;MQ0=0;MQRankSum=-3.700;QD=13.20;ReadPosRankSum=-1.065;VQSLOD=1.2110;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,16:18:54.17:735,54,0	0/0:4,0:4:3.65:0,4,18	0/0:23,0:23:64.18:0,64,831	0/0:23,1:24:31.83:0,32,746	0/0:18,0:18:51.11:0,51,649	0/0:15,0:15:35.88:0,36,456	0/0:21,0:21:56.78:0,57,786	0/0:21,0:21:47.98:0,48,569	0/0:10,0:10:30.04:0,30,383	0/0:13,0:13:36.05:0,36,415	0/0:11,0:11:27.04:0,27,346	0/0:14,0:14:41.11:0,41,494	0/0:18,0:18:51.05:0,51,653	0/0:15,0:15:42.08:0,42,522	1/1:0,14:14:30.09:376,30,0	1/1:3,12:15:45.08:526,45,0	0/1:27,0:27:43.61:44,0,88	0/0:12,0:12:2.90:0,3,69	0/1:15,1:16:39.26:39,0,53	0/1:9,0:9:5.18:5,0,40	0/1:21,1:22:31.60:32,0,84	0/0:11,0:11:24.08:0,24,346	0/0:10,0:10:20.94:0,21,245	0/0:17,0:17:48.16:0,48,678	0/0:15,0:15:29.90:0,30,388	0/0:11,0:11:30.09:0,30,415	0/0:19,0:19:54.15:0,54,731	0/0:6,0:6:18.05:0,18,235
chr10	23150726	.	G	GA	4292.18	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-12.453;DP=484;FS=1.749;HRun=8;HaplotypeScore=44.3057;InbreedingCoeff=0.9661;MQ=62.36;MQ0=2;MQRankSum=1.137;QD=29.81;ReadPosRankSum=-0.069;VQSLOD=4.7422;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,14:15:42.12:485,42,0	1/1:2,4:6:12.04:138,12,0	0/0:12,0:12:26.99:0,27,238	0/0:4,0:3:3:0,3,27	0/0:24,0:24:72.04:0,72,659	0/0:17,0:17:48.01:0,48,434	0/0:13,0:13:27:0,27,247	0/0:30,0:30:62.99:0,63,573	0/0:12,0:12:27:0,27,243	0/0:21,0:21:57.03:0,57,522	0/0:21,0:21:60.03:0,60,549	0/0:16,0:16:42.02:0,42,384	0/0:13,0:13:39:0,39,352	0/0:22,0:22:60.01:0,60,544	1/1:2,16:18:45.13:519,45,0	1/1:1,17:18:45.13:519,45,0	1/1:3,10:13:30.09:346,30,0	1/1:1,18:19:51.15:588,51,0	1/1:3,12:14:36.11:415,36,0	1/1:2,29:31:87.18:969,87,0	1/1:0,9:9:27.08:312,27,0	0/0:18,0:18:45.02:0,45,412	0/0:21,0:21:63.02:0,63,572	0/0:21,0:21:63.03:0,63,577	0/0:29,0:29:75.04:0,75,686	0/0:14,0:14:36.01:0,36,330	0/0:22,0:22:60.02:0,60,545	0/0:6,0:6:18.01:0,18,165
chr10	23151630	.	C	CA	8892.66	PASS	AB=1.000;AC=39;AF=0.696;AN=56;BaseQRankSum=-13.727;DP=449;FS=5.016;HRun=7;HaplotypeScore=60.9250;InbreedingCoeff=0.5499;MQ=72.18;MQ0=0;MQRankSum=1.314;QD=23.78;ReadPosRankSum=-3.462;VQSLOD=3.7534;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:7.11:0,7,17	0/1:10,0:10:4.03:19,0,4	0/0:10,0:8:17.85:0,18,146	0/1:8,0:7:14.02:14,0,34	1/1:4,23:27:66.12:765,66,0	1/1:1,18:18:45.14:544,45,0	1/1:0,3:3:6.02:72,6,0	1/1:8,22:30:69.16:795,69,0	1/1:2,15:17:39.12:471,39,0	1/1:4,18:22:54.17:652,54,0	1/1:2,23:26:69.08:812,69,0	1/1:0,20:20:54.17:652,54,0	1/1:4,10:14:27.08:326,27,0	1/1:0,22:23:63.15:745,63,0	0/0:11,0:11:9.60:0,10,23	0/0:13,0:13:3.76:0,4,17	0/1:16,0:16:0.63:1,0,12	0/0:21,0:21:14.95:0,15,36	0/1:16,0:16:16.35:16,0,20	0/1:21,0:21:11.80:79,0,12	0/0:10,0:10:6.22:0,6,15	1/1:5,5:10:12.04:140,12,0	1/1:1,9:10:27.08:326,27,0	1/1:1,3:4:9.03:109,9,0	1/1:3,18:21:48.15:580,48,0	1/1:1,21:22:63.19:761,63,0	1/1:5,15:20:45.14:543,45,0	1/1:1,14:15:39.12:469,39,0
chr10	23151635	.	AAAT	A	4355.27	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=1.434;DP=430;FS=3.919;HRun=0;HaplotypeScore=91.3393;InbreedingCoeff=0.8714;MQ=73.51;MQ0=0;MQRankSum=-0.219;QD=34.03;ReadPosRankSum=1.217;VQSLOD=5.1822;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,10:10:21.03:313,21,0	1/1:3,7:10:15.05:243,15,0	0/0:10,0:8:16.72:0,17,317	0/0:11,0:8:11.88:0,12,71	0/0:24,0:24:52.97:0,53,718	0/0:19,0:18:48.60:0,49,615	0/0:3,0:3:5.88:0,6,54	0/0:31,0:32:19.60:0,20,870	0/0:15,0:15:38.98:0,39,461	0/0:20,0:20:57.03:0,57,680	0/0:25,0:25:74.44:0,74,961	0/0:21,0:21:33.16:0,33,571	0/0:12,0:12:30.03:0,30,368	0/0:23,0:23:66.11:0,66,860	1/1:1,9:10:24.08:391,24,0	1/1:0,12:12:30.10:489,30,0	1/1:1,16:17:30.10:488,30,0	1/1:0,22:22:36.12:586,36,0	1/1:0,15:15:45.13:695,45,0	1/1:0,19:19:54.18:850,54,0	1/1:1,7:8:15.05:245,15,0	0/1:5,0:5:55.60:56,0,66	0/0:10,0:10:14.27:0,14,261	0/0:3,0:3:9.03:0,9,117	0/0:22,0:22:45.55:0,46,693	0/0:22,0:22:17.91:0,18,667	0/0:15,0:15:9.71:0,10,402	0/0:15,0:15:39.13:0,39,504
chr10	23152362	.	C	CAT	34654.50	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-8.648;DP=757;FS=7.946;HRun=0;HaplotypeScore=83.1912;InbreedingCoeff=0.9907;MQ=86.75;MQ0=2;MQRankSum=-11.081;QD=49.23;ReadPosRankSum=6.280;VQSLOD=5.5471;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,21:22:63.21:1178,63,0	1/1:0,12:12:27.09:521,27,0	0/0:32,0:32:87.01:0,87,1259	0/0:21,0:20:45.14:0,45,667	1/1:1,31:32:87.30:1669,87,0	1/1:2,42:43:90.31:1726,90,0	1/1:4,17:21:39.13:753,39,0	1/1:1,39:41:99:2156,120,0	1/1:0,25:26:75.26:1433,75,0	1/1:1,24:27:75.24:1407,75,0	1/1:0,32:33:90.31:1726,90,0	1/1:5,23:28:72.18:1329,72,0	1/1:1,27:28:75.26:1432,75,0	1/1:1,27:29:66.23:1275,66,0	1/1:2,35:38:99:1912,99,0	1/1:1,48:50:99:2544,132,0	1/1:0,17:17:48.16:927,48,0	1/1:2,6:8:15.05:290,15,0	1/1:2,20:23:63.16:1114,63,0	1/1:0,36:36:93.32:1770,93,0	1/1:0,13:14:36.12:695,36,0	1/1:0,15:15:45.15:869,45,0	1/1:0,19:19:47.90:927,48,0	1/1:0,17:17:45.15:869,45,0	1/1:0,25:25:72.25:1391,72,0	1/1:1,33:35:99:1863,102,0	1/1:3,51:53:99:2359,126,0	1/1:2,7:9:27.09:521,27,0
chr10	23154033	.	GT	G	5258.94	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=2.992;DP=535;FS=21.309;HRun=8;HaplotypeScore=94.6951;InbreedingCoeff=0.9948;MQ=75.09;MQ0=1;MQRankSum=-0.926;QD=24.69;ReadPosRankSum=3.739;VQSLOD=3.5545;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:62.68:0,63,733	0/0:8,0:8:21.02:0,21,237	0/0:37,1:29:54.34:0,54,723	0/0:28,0:25:29.12:0,29,584	1/1:1,19:20:51.07:492,51,0	1/1:3,13:16:39.06:377,39,0	1/1:1,13:14:30.05:290,30,0	0/0:36,0:36:99:0,99,1169	1/1:0,12:12:36.06:348,36,0	1/1:3,22:25:66.06:624,66,0	1/1:1,15:16:42.07:406,42,0	1/1:0,17:17:36.06:348,36,0	1/1:1,13:14:36.06:348,36,0	1/1:2,16:18:48.08:464,48,0	0/0:1,0:15:43.09:0,43,219	0/0:2,0:18:42.21:0,42,228	0/0:24,0:24:63.15:0,63,743	0/0:18,0:18:45.10:0,45,526	0/0:26,0:26:69.21:0,69,833	0/0:17,0:17:45.13:0,45,532	0/0:11,0:10:30.08:0,30,350	1/1:0,11:11:30.05:290,30,0	1/1:2,12:14:33.05:318,33,0	1/1:0,16:16:48.08:464,48,0	1/1:1,19:20:51.08:493,51,0	0/0:29,0:29:75.22:0,75,894	0/0:25,0:25:69.21:0,69,831	0/0:4,0:4:12.04:0,12,144
chr10	23154059	.	C	CT	714.39	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-0.604;DP=501;FS=6.218;HRun=8;HaplotypeScore=131.8773;InbreedingCoeff=0.8963;MQ=74.68;MQ0=0;MQRankSum=-5.857;QD=21.65;ReadPosRankSum=-0.694;VQSLOD=2.0915;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:48.01:0,48,439	0/0:7,0:7:18.01:0,18,165	0/0:33,0:27:52.29:0,52,470	0/0:27,0:25:30.73:0,31,305	0/0:23,0:23:63.03:0,63,577	0/0:12,0:12:33.02:0,33,302	0/0:13,0:13:23.99:0,24,215	0/0:33,0:33:77.97:0,78,701	0/0:9,0:10:26.04:0,26,221	0/0:25,0:25:69.04:0,69,631	0/0:16,0:17:41.06:0,41,363	0/0:18,0:18:45.02:0,45,412	0/0:13,0:13:30.01:0,30,275	0/0:13,0:13:33.02:0,33,302	1/1:5,13:18:14.66:420,15,0	1/1:3,12:15:39.04:412,39,0	0/0:20,0:20:51.03:0,51,466	0/0:18,0:18:41.96:0,42,376	0/0:27,0:27:63.02:0,63,577	0/0:15,0:15:39.02:0,39,357	0/0:9,0:9:21.01:0,21,192	0/0:11,0:11:18:0,18,165	0/0:13,0:13:30.01:0,30,275	0/0:16,0:16:45.02:0,45,412	0/0:19,0:19:48.01:0,48,435	0/0:32,0:32:87.05:0,87,796	0/0:19,0:19:51:0,51,460	0/0:2,0:2:3:0,3,27
chr10	23155253	.	CA	C	1532.94	PASS	AB=0.711;AC=44;AF=0.786;AN=56;BaseQRankSum=3.207;DP=429;FS=5.373;HRun=16;HaplotypeScore=108.7201;InbreedingCoeff=-0.0843;MQ=48.20;MQ0=21;MQRankSum=-2.912;QD=3.63;ReadPosRankSum=2.057;VQSLOD=1.0753;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:15,8:23:3.75:80,0,4	1/1:3,7:10:17.59:108,18,0	0/0:7,0:5:3.19:0,3,22	0/1:4,1:5:10.18:10,0,17	1/1:10,7:18:11.36:71,11,0	1/1:12,9:20:25.37:149,25,0	0/1:10,7:18:15.56:30,0,16	1/1:9,0:20:20.19:59,20,0	1/1:7,4:12:13.46:71,13,0	0/1:13,8:20:3:90,0,3	1/1:6,8:16:17.21:107,17,0	0/1:10,2:12:2.95:37,0,3	0/1:6,6:13:16.37:43,0,16	0/1:9,5:14:21.48:21,0,37	1/1:9,0:18:18:52,18,0	1/1:3,0:12:16.27:47,16,0	1/1:9,8:17:3.14:73,3,0	0/1:4,8:11:4.68:86,0,5	0/1:12,4:17:6.55:65,0,7	0/1:8,10:16:4.65:86,0,5	1/1:6,2:7:2.84:16,3,0	1/1:7,8:14:10.64:57,11,0	1/1:5,5:10:11.73:72,12,0	1/1:6,6:12:10.21:59,10,0	1/1:11,7:17:14.25:89,14,0	1/1:13,1:24:19.31:68,19,0	1/1:5,1:7:4.02:12,4,0	1/1:6,0:5:4.04:12,4,0
chr10	23155290	.	CTTGATAT	C	13928.56	PASS	AC=48;AF=0.923;AN=52;BaseQRankSum=7.890;DP=313;FS=15.421;HRun=0;HaplotypeScore=166.5121;InbreedingCoeff=0.8625;MQ=81.90;MQ0=0;MQRankSum=-8.774;QD=49.74;ReadPosRankSum=5.489;VQSLOD=3.4810;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,12:13:25.90:506,26,0	1/1:0,8:8:15.05:314,15,0	0/0:21,0:21:57.20:0,57,2254	0/0:11,0:11:30.10:0,30,1158	1/1:0,21:21:42.62:864,43,0	1/1:2,13:15:39.91:767,40,0	1/1:0,10:9:24.08:502,24,0	1/1:0,11:11:33.11:702,33,0	1/1:1,3:4:8.73:187,9,0	1/1:0,17:17:51.18:1085,51,0	1/1:0,13:13:33.07:639,33,0	1/1:0,9:9:27.09:563,27,0	1/1:0,10:10:27.09:561,27,0	1/1:0,7:7:21.07:437,21,0	1/1:0,20:20:57.20:1185,57,0	1/1:0,15:15:45.15:935,45,0	1/1:1,7:8:9.03:188,9,0	1/1:0,4:4:12.04:256,12,0	1/1:2,10:12:31.35:648,31,0	1/1:0,21:21:39.13:806,39,0	./.	1/1:0,7:7:18.06:375,18,0	1/1:0,10:10:12.04:248,12,0	1/1:2,6:8:7.27:127,7,0	1/1:1,10:11:28.65:564,29,0	1/1:2,11:13:37.55:710,38,0	1/1:0,13:13:36.12:760,36,0	./.
chr10	23155298	.	CCTA	C	8188.11	PASS	AC=48;AF=0.923;AN=52;BaseQRankSum=9.376;DP=325;FS=26.858;HRun=0;HaplotypeScore=168.0831;InbreedingCoeff=0.8816;MQ=84.23;MQ0=0;MQRankSum=-9.666;QD=28.53;ReadPosRankSum=6.012;VQSLOD=3.0855;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,12:13:24.07:280,24,0	1/1:0,8:8:15.04:176,15,0	0/0:22,0:22:66.23:0,66,1601	0/0:14,0:14:42.11:0,42,950	1/1:1,21:22:44.86:508,45,0	1/1:0,13:13:36.10:416,36,0	1/1:1,10:10:27.08:314,27,0	1/1:1,11:12:36.11:434,36,0	1/1:1,3:4:11.98:123,12,0	1/1:1,17:17:51.16:614,51,0	1/1:1,13:14:33.10:393,33,0	1/1:0,9:9:27.08:313,27,0	1/1:0,10:10:27.08:312,27,0	1/1:0,7:7:21.06:243,21,0	1/1:2,20:22:66.11:745,66,0	1/1:0,15:15:45.13:519,45,0	1/1:1,7:8:9.03:104,9,0	1/1:1,4:5:14.99:164,15,0	1/1:0,10:10:30.09:368,30,0	1/1:2,21:23:45.13:530,45,0	./.	1/1:0,7:7:18.05:209,18,0	1/1:2,10:12:17.64:165,18,0	1/1:1,6:7:6.02:68,6,0	1/1:1,10:11:29.98:328,30,0	1/1:1,11:12:36.11:422,36,0	1/1:1,13:14:38.98:442,39,0	./.
chr10	23155299	.	CTA	C	7405.17	PASS	AC=48;AF=0.923;AN=52;BaseQRankSum=9.557;DP=331;FS=28.795;HRun=0;HaplotypeScore=165.9063;InbreedingCoeff=0.9036;MQ=85.97;MQ0=0;MQRankSum=-9.790;QD=25.45;ReadPosRankSum=5.952;VQSLOD=3.7886;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,1:13:24.05:246,24,0	1/1:8,0:8:15.03:155,15,0	0/0:24,0:24:72.25:0,72,1356	0/0:14,0:14:39.13:0,39,752	1/1:21,1:22:44.82:449,45,0	1/1:13,0:13:36.08:365,36,0	1/1:11,1:11:27.04:269,27,0	1/1:12,0:12:36.09:388,36,0	1/1:4,0:4:12.03:136,12,0	1/1:17,1:17:51.12:542,51,0	1/1:14,0:14:33.07:335,33,0	1/1:9,0:9:27.06:275,27,0	1/1:10,0:10:27.06:273,27,0	1/1:7,0:7:21.04:214,21,0	1/1:21,1:22:66.11:666,66,0	1/1:15,0:15:45.10:457,45,0	1/1:8,0:8:9.02:92,9,0	1/1:5,0:5:15.04:168,15,0	1/1:11,0:11:33.09:370,33,0	1/1:22,1:23:45.09:461,45,0	./.	1/1:8,0:8:21.02:204,21,0	1/1:12,0:12:17.87:171,18,0	1/1:7,1:8:9.02:102,9,0	1/1:11,0:11:30.05:296,30,0	1/1:11,1:12:36.08:373,36,0	1/1:14,0:13:39.05:398,39,0	./.
chr10	23155301	.	A	ACC	3566.65	PASS	AC=50;AF=0.926;AN=54;BaseQRankSum=9.188;DP=397;FS=23.098;HRun=0;HaplotypeScore=204.2041;InbreedingCoeff=0.8069;MQ=81.68;MQ0=0;MQRankSum=-9.865;QD=9.99;ReadPosRankSum=4.594;VQSLOD=1.9783;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:13:15.60:45,16,0	1/1:9,0:9:11.12:53,11,0	0/0:26,0:26:72.23:0,72,1137	0/0:14,0:14:39.13:0,39,636	1/1:25,0:25:27.18:124,27,0	1/1:16,0:16:26.02:86,26,0	1/1:15,0:14:19.05:105,19,0	1/1:17,0:17:39.62:366,40,0	1/1:7,0:7:11.54:88,12,0	1/1:20,0:19:44.90:274,45,0	1/1:17,0:17:22.09:110,22,0	1/1:9,0:9:17.64:51,18,0	1/1:13,0:13:27.75:215,28,0	1/1:8,0:8:16.49:59,16,0	1/1:27,0:27:57.16:391,57,0	1/1:19,0:19:38.71:150,39,0	1/1:10,0:10:8.82:77,9,0	1/1:5,0:5:11.90:68,12,0	1/1:16,0:16:36.64:320,37,0	1/1:27,0:27:29.66:177,30,0	1/1:5,0:5:4.78:25,5,0	1/1:12,0:12:19.93:87,20,0	1/1:12,2:14:13.20:114,13,0	1/1:10,0:10:8.16:56,8,0	1/1:12,1:13:20.21:106,20,0	1/1:16,0:16:35.70:284,36,0	1/1:13,1:13:28.69:136,29,0	./.
chr10	23156077	.	T	TCA	19118.77	PASS	AB=1.000;AC=53;AF=0.946;AN=56;BaseQRankSum=-5.879;DP=546;FS=2.326;HRun=0;HaplotypeScore=61.5017;InbreedingCoeff=0.6085;MQ=63.29;MQ0=1;MQRankSum=-0.082;QD=35.47;ReadPosRankSum=3.580;VQSLOD=6.7174;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,12:17:27.09:455,27,0	1/1:1,15:16:36.03:607,36,0	0/1:12,0:10:19.66:20,0,191	0/0:7,0:7:15.01:0,15,155	1/1:1,29:30:69.24:1162,69,0	1/1:2,22:25:57.19:958,57,0	1/1:3,17:20:39.13:658,39,0	1/1:5,35:40:99:1682,105,0	1/1:0,11:11:30.10:506,30,0	1/1:9,21:31:63.19:1029,63,0	1/1:4,21:25:12.56:771,13,0	1/1:4,12:16:36.12:605,36,0	1/1:3,19:22:48.16:808,48,0	1/1:6,15:21:39.13:654,39,0	1/1:4,14:18:27.09:456,27,0	1/1:5,18:23:48.16:809,48,0	1/1:0,15:16:36.12:607,36,0	1/1:1,5:6:12.04:202,12,0	1/1:1,13:15:39.12:631,39,0	1/1:1,24:24:60.21:1011,60,0	1/1:0,22:22:45.15:759,45,0	1/1:2,9:11:21.07:345,21,0	1/1:2,13:15:30.10:506,30,0	1/1:4,14:18:35.78:605,36,0	1/1:3,21:24:60.20:1002,60,0	1/1:2,21:23:63.22:1059,63,0	1/1:1,23:24:48.16:808,48,0	1/1:4,9:13:24.08:400,24,0
chr10	23156195	.	CAT	C	9335.87	PASS	AB=0.621;AC=30;AF=0.536;AN=56;BaseQRankSum=-0.083;DP=523;FS=67.388;HRun=0;HaplotypeScore=141.5166;InbreedingCoeff=-0.6436;MQ=56.34;MQ0=11;MQRankSum=0.320;QD=18.75;ReadPosRankSum=1.435;VQSLOD=2.3457;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:5,3:7:62.38:62,0,98	0/1:3,6:9:29.40:210,0,29	0/0:8,0:4:0.88:0,1,2	0/0:16,0:8:7.89:0,8,42	0/1:6,23:29:99:454,0,103	0/1:16,13:29:14.57:374,0,15	0/1:5,7:12:99:205,0,125	0/1:36,34:62:99:948,0,1100	0/1:4,7:11:73.99:243,0,74	0/1:6,24:30:99:877,0,115	0/1:13,22:34:99:686,0,130	0/1:3,5:8:79.98:172,0,80	0/1:5,11:16:20.55:301,0,21	0/1:4,9:12:26.55:246,0,27	1/1:2,12:14:26.96:347,27,0	0/1:4,8:12:73.99:243,0,74	0/1:13,7:19:99:166,0,135	0/1:3,8:10:29.52:210,0,30	0/1:4,4:8:81.90:82,0,181	0/1:7,17:24:56.08:456,0,56	0/1:8,13:21:99:273,0,166	1/1:3,6:9:15.05:193,15,0	0/1:5,14:19:59.11:421,0,59	0/1:6,8:14:38.19:207,0,38	0/1:7,16:23:8.49:459,0,8	0/1:8,14:22:44.11:587,0,44	1/1:3,17:19:0.54:567,1,0	1/1:0,11:11:27.09:347,27,0
chr10	23156231	.	G	GAT	8311.17	PASS	AB=0.619;AC=51;AF=0.944;AN=54;BaseQRankSum=1.131;DP=420;FS=0.000;HRun=0;HaplotypeScore=170.3696;InbreedingCoeff=0.3142;MQ=53.01;MQ0=1;MQRankSum=-3.456;QD=20.57;ReadPosRankSum=2.582;VQSLOD=4.8077;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,2:8:5.75:57,6,0	1/1:4,6:10:17.93:249,18,0	0/0:10,0:9:14.39:0,14,139	./.	0/1:10,16:26:7.61:241,0,8	1/1:16,14:30:41.81:623,42,0	1/1:7,2:9:12.04:185,12,0	1/1:27,24:51:35.81:1232,36,0	1/1:5,1:6:3.48:47,3,0	1/1:12,16:27:65.67:984,66,0	1/1:14,13:27:47.56:703,48,0	1/1:4,3:7:9.03:142,9,0	1/1:5,9:14:24.06:347,24,0	1/1:3,6:9:15.05:224,15,0	1/1:8,0:9:7.18:46,7,0	1/1:10,0:15:0.39:112,0,0	1/1:10,3:13:22.20:165,22,0	1/1:6,0:6:2.50:9,2,0	1/1:4,2:4:6.02:100,6,0	1/1:8,8:16:15.05:227,15,0	1/1:11,5:16:8.60:107,9,0	1/1:1,5:6:6.02:95,6,0	1/1:8,4:12:10.75:143,11,0	1/1:7,2:9:8.75:108,9,0	1/1:7,17:24:42.03:625,42,0	1/1:10,7:17:30.10:458,30,0	1/1:5,17:21:29.35:755,29,0	1/1:3,5:8:21.07:331,21,0
chr10	23156241	.	C	CAT	7355.04	PASS	AC=52;AF=0.963;AN=54;BaseQRankSum=-0.315;DP=354;FS=0.000;HRun=0;HaplotypeScore=161.5157;InbreedingCoeff=0.2360;MQ=48.70;MQ0=2;MQRankSum=-1.713;QD=21.57;ReadPosRankSum=1.528;VQSLOD=5.1092;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,2:6:2.74:12,3,0	1/1:1,9:10:15.05:239,15,0	0/0:9,0:9:2.42:0,2,73	./.	1/1:7,14:21:12.04:195,12,0	1/1:8,17:25:38.72:581,39,0	1/1:5,2:7:3.01:45,3,0	1/1:18,20:38:97.41:1435,97,0	1/1:3,1:4:6.02:82,6,0	1/1:11,15:25:51.12:777,51,0	1/1:10,14:24:27.05:422,27,0	1/1:3,3:6:6.02:95,6,0	1/1:5,9:14:24.08:359,24,0	1/1:5,5:10:12.04:182,12,0	1/1:6,2:8:6.01:71,6,0	1/1:7,6:13:19.04:197,19,0	1/1:9,3:12:16.47:101,16,0	1/1:4,0:4:5.50:45,6,0	1/1:3,3:3:6.01:78,6,0	1/1:6,6:12:12.04:181,12,0	1/1:7,5:12:5.60:60,6,0	1/1:1,5:6:6.02:95,6,0	1/1:3,4:7:6.02:95,6,0	1/1:6,1:7:5.74:62,6,0	1/1:4,19:23:37.68:572,38,0	1/1:2,9:11:27.04:394,27,0	1/1:2,19:20:48.16:742,48,0	1/1:3,5:8:15.05:239,15,0
chr10	23156300	.	CATAT	C	4907.87	PASS	AB=0.500;AC=47;AF=0.870;AN=54;BaseQRankSum=-2.550;DP=299;FS=1.314;HRun=0;HaplotypeScore=147.8001;InbreedingCoeff=0.5139;MQ=71.46;MQ0=13;MQRankSum=-3.073;QD=20.62;ReadPosRankSum=4.311;VQSLOD=4.2926;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,1:3:3.01:52,3,0	1/1:3,6:9:12.04:207,12,0	0/0:18,0:9:11.05:0,11,134	0/0:29,0:15:21.37:0,21,323	1/1:6,8:14:2.73:52,3,0	1/1:1,8:9:3.01:52,3,0	0/0:1,0:1:0:0,0,0	./.	1/1:0,5:6:9.03:155,9,0	1/1:3,11:15:36.12:597,36,0	1/1:3,12:15:12.04:207,12,0	1/1:3,6:9:12.04:207,12,0	1/1:2,11:13:18.06:310,18,0	1/1:1,7:7:6.02:104,6,0	1/1:3,7:10:9.03:155,9,0	1/1:2,7:9:12.04:207,12,0	1/1:1,3:9:8.89:108,9,0	1/1:0,2:4:12.03:160,12,0	1/1:0,0:2:6.01:56,6,0	1/1:1,14:14:12.04:207,12,0	0/1:0,1:3:0.01:0,0,0	1/1:3,10:13:15.05:259,15,0	1/1:2,8:10:5.89:103,6,0	1/1:1,2:3:3.01:52,3,0	1/1:2,13:15:12.04:207,12,0	1/1:2,10:11:24.08:415,24,0	1/1:3,20:22:48.16:829,48,0	1/1:2,5:7:12.04:207,12,0
chr10	23156348	.	TAC	T	9224.19	PASS	AB=0.543;AC=51;AF=0.911;AN=56;BaseQRankSum=-2.109;DP=416;FS=0.000;HRun=0;HaplotypeScore=152.1728;InbreedingCoeff=0.6321;MQ=59.91;MQ0=2;MQRankSum=-0.854;QD=23.35;ReadPosRankSum=1.785;VQSLOD=5.5104;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,13:17:24.08:300,24,0	1/1:3,6:9:15.05:187,15,0	0/0:9,0:8:11.23:0,11,196	0/0:12,0:8:5.69:0,6,72	1/1:2,20:22:42.03:525,42,0	1/1:1,11:12:30.09:375,30,0	1/1:1,6:7:12.02:150,12,0	1/1:5,24:29:72.12:816,72,0	1/1:2,8:11:18.06:225,18,0	1/1:4,19:24:65.93:752,66,0	1/1:5,22:26:45.14:561,45,0	1/1:2,11:13:24.08:300,24,0	1/1:5,15:20:36.11:450,36,0	1/1:1,10:10:18.06:225,18,0	0/1:3,16:19:13.38:376,0,13	1/1:1,10:11:27.02:318,27,0	1/1:5,3:12:20.53:176,21,0	1/1:2,4:6:14.88:162,15,0	1/1:3,10:15:32.74:341,33,0	1/1:4,14:18:18.06:225,18,0	1/1:2,16:19:36.01:450,36,0	1/1:4,7:10:9.03:112,9,0	1/1:2,11:13:18.04:211,18,0	1/1:1,5:6:9.03:112,9,0	1/1:4,13:17:45.13:549,45,0	1/1:2,16:17:48.13:575,48,0	1/1:5,15:20:51.08:602,51,0	1/1:1,4:5:12.04:150,12,0
chr10	23156867	.	T	TAA	11934.06	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-1.173;DP=585;FS=10.516;HRun=8;HaplotypeScore=96.5044;InbreedingCoeff=0.9933;MQ=82.43;MQ0=0;MQRankSum=-5.485;QD=24.31;ReadPosRankSum=2.479;VQSLOD=3.2178;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,0:37:67.10:230,67,0	1/1:1,0:12:19.75:68,20,0	0/0:14,0:14:34.64:0,35,366	0/0:24,0:24:56.83:0,57,595	1/1:3,22:28:74.03:965,74,0	1/1:3,24:28:62.70:961,63,0	1/1:2,13:15:29.75:475,30,0	1/1:13,2:32:69.14:745,69,0	1/1:1,14:15:36.12:571,36,0	1/1:4,15:19:45.15:711,45,0	1/1:3,9:13:30.06:438,30,0	1/1:1,23:26:71.22:1065,71,0	1/1:2,17:21:47.13:684,47,0	1/1:4,21:25:57.19:904,57,0	0/0:31,0:31:87.22:0,87,969	0/0:24,0:24:66.17:0,66,735	1/1:2,0:23:49.91:172,50,0	1/1:5,0:18:32.44:112,32,0	1/1:3,0:22:15.72:125,16,0	1/1:2,0:20:37.71:136,38,0	1/1:2,0:18:32.44:112,32,0	1/1:0,14:14:39.09:583,39,0	1/1:1,10:11:24.04:353,24,0	1/1:2,14:17:39.13:619,39,0	1/1:0,14:14:29.59:437,30,0	1/1:3,0:19:45.08:443,45,0	1/1:8,2:31:66.11:711,66,0	1/1:0,0:11:33.05:315,33,0
chr10	23156963	.	TG	T	2002	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=11.006;DP=667;FS=5.656;HRun=3;HaplotypeScore=108.8593;InbreedingCoeff=0.9998;MQ=74.19;MQ0=0;MQRankSum=0.028;QD=32.29;ReadPosRankSum=1.537;VQSLOD=3.2737;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,108,1588	0/0:15,0:15:39.13:0,39,579	0/0:21,0:21:63.17:0,63,862	0/0:17,0:17:45.15:0,45,651	0/0:38,0:38:99:0,105,1536	0/0:14,0:14:42.13:0,42,608	0/0:21,0:21:63.21:0,63,939	0/0:36,0:36:99:0,102,1511	0/0:13,0:13:39.13:0,39,582	0/0:14,0:14:42.14:0,42,613	0/0:27,0:27:81.16:0,81,1161	0/0:30,0:30:90.30:0,90,1347	0/0:32,0:32:87.29:0,87,1303	0/0:34,0:34:99:0,99,1460	1/1:2,37:39:99:1296,108,0	1/1:0,23:23:69.21:828,69,0	0/0:16,0:16:48.16:0,48,715	0/0:15,0:15:45.15:0,45,660	0/0:23,0:23:69.18:0,69,984	0/0:28,0:28:78.22:0,78,1142	0/0:18,0:18:51.17:0,51,764	0/0:16,0:16:45.12:0,45,633	0/0:22,0:22:66.22:0,66,983	0/0:25,0:25:72.24:0,72,1071	0/0:33,0:33:99:0,99,1482	0/0:22,0:22:63.21:0,63,940	0/0:26,0:25:78.09:0,78,1133	0/0:13,0:13:36.12:0,36,539
chr10	23157991	.	TA	T	4714.43	PASS	AC=42;AF=0.913;AN=46;BaseQRankSum=0.564;DP=176;FS=13.025;HRun=2;HaplotypeScore=79.9402;InbreedingCoeff=0.6638;MQ=85.13;MQ0=0;MQRankSum=-6.971;QD=30.42;ReadPosRankSum=2.808;VQSLOD=3.3582;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,4:4:8.96:96,9,0	1/1:0,5:5:14.98:173,15,0	0/0:7,0:7:21.07:0,21,324	0/0:12,0:12:36.08:0,36,488	1/1:0,15:15:29.98:369,30,0	1/1:1,8:9:12.47:133,12,0	./.	1/1:2,18:20:54.18:701,54,0	./.	1/1:0,10:10:30.10:389,30,0	1/1:0,12:12:26.91:290,27,0	1/1:0,1:1:2.94:18,3,0	1/1:0,3:3:9.03:116,9,0	1/1:0,3:3:5.88:36,6,0	./.	1/1:1,1:2:2.96:19,3,0	1/1:0,5:5:12.04:155,12,0	1/1:0,2:2:3.01:39,3,0	1/1:0,6:6:18.06:233,18,0	1/1:0,12:12:35.99:409,36,0	./.	1/1:0,11:11:27.52:331,28,0	1/1:0,5:5:15.01:175,15,0	./.	1/1:0,10:10:30.01:351,30,0	1/1:0,5:5:15.01:175,15,0	1/1:0,8:8:20.98:234,21,0	1/1:0,7:7:21.07:272,21,0
chr10	23158511	.	GGGGGGGTA	G	5036.60	PASS	AB=1.000;AC=29;AF=0.630;AN=46;BaseQRankSum=2.649;DP=277;FS=16.164;HRun=0;HaplotypeScore=83.9913;InbreedingCoeff=0.7257;MQ=79.19;MQ0=0;MQRankSum=-5.583;QD=26.93;ReadPosRankSum=5.454;VQSLOD=2.9463;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:23,1:24:36.12:598,36,0	1/1:4,0:4:11.99:185,12,0	0/0:11,0:12:21.54:0,22,792	0/0:13,0:13:21.07:0,21,684	0/0:9,0:9:4.31:0,4,23	./.	0/0:13,0:13:2.97:0,3,20	1/1:16,1:17:35.89:419,36,0	0/0:8,0:8:0.89:0,1,2	0/1:4,0:4:0:0,0,0	./.	1/1:1,0:1:3:26,3,0	0/0:4,0:4:3.01:0,3,48	0/0:9,0:9:14.88:0,15,289	1/1:1,13:14:24.08:631,24,0	1/1:3,13:16:25.02:632,25,0	1/1:17,0:17:24.08:376,24,0	1/1:9,0:9:24.08:394,24,0	1/1:20,0:20:42.09:653,42,0	1/1:14,0:14:15.05:253,15,0	1/1:8,0:8:3.75:80,4,0	./.	./.	0/0:3,0:3:6.02:0,6,96	1/1:11,0:11:0.47:1,0,0	1/1:10,1:11:24.08:356,24,0	1/1:17,0:17:30.10:433,30,0	./.
chr10	23158512	.	GGGGGGTA	G	6327.84	PASS	AB=1.000;AC=31;AF=0.646;AN=48;BaseQRankSum=-0.026;DP=280;FS=18.717;HRun=0;HaplotypeScore=76.3048;InbreedingCoeff=0.7186;MQ=78.89;MQ0=0;MQRankSum=-5.756;QD=32.12;ReadPosRankSum=5.093;VQSLOD=2.8044;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,17:24:36.12:815,36,0	1/1:1,3:4:11.99:208,12,0	0/0:13,0:13:24.54:0,25,787	0/0:13,0:13:20.85:0,21,584	1/1:9,0:9:5.42:36,5,0	./.	0/0:12,0:12:0.47:0,0,1	1/1:7,11:18:36.12:614,36,0	0/0:8,0:8:0.89:0,1,2	0/1:4,0:4:0:0,0,0	0/0:3,0:3:1.61:0,2,6	1/1:1,0:1:3:26,3,0	0/0:4,0:4:3:0,3,34	0/0:8,0:8:11.37:0,11,217	1/1:14,0:14:23.80:422,24,0	1/1:16,0:16:25.02:424,25,0	1/1:5,12:17:24.08:580,24,0	1/1:2,7:9:24.08:538,24,0	1/1:6,13:19:42.14:947,42,0	1/1:4,10:14:15.05:333,15,0	1/1:3,5:8:8.70:119,9,0	./.	./.	0/0:4,0:4:8.98:0,9,89	1/1:11,0:11:0.47:1,0,0	1/1:6,6:12:24.08:559,24,0	1/1:7,10:17:30.10:706,30,0	./.
chr10	23158516	.	GGTA	G	3591.41	PASS	AB=0.833;AC=41;AF=0.854;AN=48;BaseQRankSum=3.839;DP=251;FS=0.955;HRun=0;HaplotypeScore=67.7120;InbreedingCoeff=0.5705;MQ=77.25;MQ0=0;MQRankSum=-6.692;QD=17.10;ReadPosRankSum=2.463;VQSLOD=2.8516;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:22:36:343,36,0	1/1:4,0:4:11.93:100,12,0	0/0:13,0:13:30.53:0,31,538	0/0:12,0:12:5.65:0,6,278	1/1:9,0:9:9.03:113,9,0	./.	1/1:10,1:11:2.99:37,3,0	1/1:13,1:14:36.10:444,36,0	0/1:8,0:8:0:0,0,0	0/1:2,0:2:0:0,0,0	1/1:3,0:3:9.03:132,9,0	1/1:1,0:1:3:26,3,0	1/1:3,0:3:6:68,6,0	1/1:6,0:6:10.68:77,11,0	1/1:14,0:14:23.86:233,24,0	1/1:13,0:13:24.04:234,24,0	1/1:15,0:15:24.05:241,24,0	1/1:9,0:9:24.05:251,24,0	1/1:16,0:16:36.32:375,36,0	1/1:13,0:13:14.98:140,15,0	1/1:9,0:9:1.76:118,2,0	./.	./.	1/1:4,0:4:9.02:116,9,0	0/1:0,9:9:0:0,0,0	1/1:10,0:10:24.05:240,24,0	1/1:15,0:15:30.06:303,30,0	./.
chr10	23158517	.	GTA	G	3066.33	PASS	AB=0.833;AC=41;AF=0.891;AN=46;BaseQRankSum=3.928;DP=235;FS=0.949;HRun=0;HaplotypeScore=63.5961;InbreedingCoeff=0.4299;MQ=77.60;MQ0=0;MQRankSum=-6.521;QD=15.03;ReadPosRankSum=2.150;VQSLOD=3.5882;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:19:35.62:273,36,0	1/1:4,0:4:11.78:82,12,0	0/0:13,0:13:29.44:0,29,453	0/1:11,0:11:8.58:9,0,222	1/1:1,8:9:9.03:114,9,0	./.	1/1:1,9:11:2.99:37,3,0	1/1:13,1:14:36.05:420,36,0	0/1:0,8:8:0:0,0,0	./.	1/1:3,0:3:9.03:132,9,0	1/1:1,0:1:3:26,3,0	1/1:3,0:3:6.02:91,6,0	1/1:5,1:6:14.93:139,15,0	1/1:13,0:13:23.91:186,24,0	1/1:13,0:13:23.91:186,24,0	1/1:12,0:12:23.94:194,24,0	1/1:8,0:8:23.96:210,24,0	1/1:14,0:14:33.48:296,33,0	1/1:11,0:11:14.77:110,15,0	1/1:7,2:9:1.94:113,2,0	./.	./.	1/1:4,0:4:9.03:121,9,0	0/1:9,0:9:0:0,0,0	1/1:7,3:10:23.94:193,24,0	1/1:11,1:12:29.94:244,30,0	./.
chr10	23158518	.	TAGGGGGGG	T	4668.37	PASS	AB=1.000;AC=28;AF=0.609;AN=46;BaseQRankSum=4.436;DP=236;FS=18.017;HRun=0;HaplotypeScore=79.2843;InbreedingCoeff=0.6628;MQ=77.54;MQ0=0;MQRankSum=-7.436;QD=30.31;ReadPosRankSum=6.249;VQSLOD=2.1802;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:18,1:19:41.79:691,42,0	1/1:3,1:4:12.04:234,12,0	0/0:13,0:13:30.57:0,31,1156	0/0:11,0:11:19.99:0,20,764	0/0:9,0:9:11.85:0,12,93	./.	0/0:11,0:11:3.01:0,3,38	1/1:14,0:14:8.94:140,9,0	0/0:8,0:8:0.89:0,1,2	0/0:2,0:2:2.97:0,3,20	0/1:3,0:3:12.22:12,0,69	./.	0/1:3,0:3:3.94:4,0,69	0/0:6,0:6:15.04:0,15,384	1/1:13,0:13:7.13:455,7,0	1/1:13,0:13:25.02:481,25,0	1/1:12,0:12:24.08:437,24,0	1/1:7,1:8:24.08:469,24,0	1/1:13,1:14:42.13:759,42,0	1/1:10,1:11:18.88:313,19,0	1/1:9,0:9:14.98:241,15,0	./.	./.	0/0:6,0:6:13.11:0,13,211	1/1:9,0:9:0.47:1,0,0	1/1:10,0:10:6.83:196,7,0	1/1:12,0:12:29.56:237,30,0	./.
chr10	23159273	.	TA	T	2629.42	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-3.241;DP=609;FS=0.827;HRun=9;HaplotypeScore=83.8853;InbreedingCoeff=0.9960;MQ=73.08;MQ0=0;MQRankSum=-0.782;QD=20.54;ReadPosRankSum=3.102;VQSLOD=4.2670;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,34:37:99:906,99,0	1/1:1,8:9:21.01:192,21,0	0/0:19,0:18:40.58:0,41,408	0/0:12,0:10:18.05:0,18,205	0/0:32,0:34:87.05:0,87,963	0/0:21,0:21:60.18:0,60,692	0/0:19,1:20:26.69:0,27,538	0/0:29,0:29:69.18:0,69,772	0/0:18,0:18:54.11:0,54,600	0/0:28,0:28:66.19:0,66,754	0/0:19,0:19:51.15:0,51,589	0/0:24,0:24:69.21:0,69,796	0/0:30,0:30:81.24:0,81,935	0/0:26,0:28:77.84:0,78,834	0/0:21,0:21:54.13:0,54,604	0/0:15,0:15:39.10:0,39,440	1/1:3,15:18:33.01:302,33,0	1/1:0,12:12:33.02:302,33,0	1/1:2,6:8:18:165,18,0	1/1:1,24:25:60.01:549,60,0	1/1:4,15:19:45.02:412,45,0	0/0:18,0:18:51.15:0,51,588	0/0:20,0:20:54.14:0,54,606	0/0:21,0:21:57.15:0,57,646	0/0:27,0:27:72.20:0,72,822	0/0:32,0:32:84.25:0,84,970	0/0:27,0:28:78.05:0,78,870	0/0:16,0:16:48.13:0,48,544
chr10	23161836	.	AACACAC	A	4285.89	PASS	AB=0.868;AC=33;AF=0.635;AN=52;BaseQRankSum=7.539;DP=517;FS=10.424;HRun=0;HaplotypeScore=124.3032;InbreedingCoeff=-0.0202;MQ=57.75;MQ0=13;MQRankSum=-5.806;QD=10.20;ReadPosRankSum=-2.054;VQSLOD=2.6463;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:21:41.54:42,0,47	1/1:10,0:10:9.03:124,9,0	./.	0/0:15,0:11:0:0,0,0	1/1:16,13:30:9.45:297,9,0	0/1:14,3:20:1.98:221,0,2	0/1:17,7:24:29.93:110,0,30	0/0:21,0:21:9.75:0,10,59	1/1:8,10:18:12.04:244,12,0	1/1:11,5:16:21.07:407,21,0	1/1:14,3:16:1.95:190,2,0	1/1:8,10:19:18.06:337,18,0	0/1:10,11:20:0.15:325,0,0	0/1:13,7:20:14.80:265,0,15	0/1:26,0:26:3.39:226,0,3	1/1:18,0:18:14.95:185,15,0	0/0:11,0:11:8.95:0,9,68	./.	0/1:14,0:14:35.67:101,0,36	0/1:16,0:16:37.94:45,0,38	0/0:20,0:16:8.67:0,9,61	1/1:8,11:18:5.10:234,5,0	0/1:8,13:22:2.38:293,0,2	1/1:10,7:19:6.41:63,6,0	1/1:9,11:20:0.40:283,0,0	0/1:24,0:24:81.05:172,0,81	0/1:20,0:19:25.60:74,0,26	1/1:4,0:2:3.01:50,3,0
chr10	23161867	.	ACACACACACACACC	A	2165.78	PASS	AB=0.956;AC=14;AF=0.250;AN=56;BaseQRankSum=1.501;DP=587;FS=5.030;HRun=0;HaplotypeScore=214.0424;InbreedingCoeff=-0.0104;MQ=51.67;MQ0=40;MQRankSum=1.446;QD=9.67;ReadPosRankSum=-1.305;VQSLOD=1.6714;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:26:22.34:22,0,328	1/1:2,5:6:9.03:368,9,0	0/0:35,0:9:2.93:0,3,164	0/0:35,0:12:0.22:0,0,195	0/0:27,0:26:41.11:0,41,777	0/0:16,0:16:20.70:0,21,483	0/0:18,0:18:24.06:0,24,372	0/1:21,0:18:99:198,0,104	0/0:20,0:19:30.06:0,30,590	0/0:17,0:15:39.18:0,39,597	0/0:22,0:20:35.59:0,36,988	0/0:28,0:27:51.45:0,51,856	0/0:25,0:22:36.10:0,36,730	0/0:18,0:18:36.02:0,36,541	1/1:6,16:21:18.06:736,18,0	0/1:5,19:24:18.94:476,0,19	0/1:14,0:14:48.89:49,0,110	0/1:10,0:9:45.66:46,0,72	0/1:17,0:15:75.08:193,0,75	0/1:19,0:18:14.72:15,0,102	0/1:22,0:17:45.13:45,0,128	0/0:18,0:16:19.79:0,20,318	0/0:23,0:22:34.12:0,34,510	0/0:21,0:21:20.98:0,21,284	0/0:23,0:23:45.11:0,45,882	0/1:33,0:32:99:149,0,746	0/0:17,0:16:13.24:0,13,133	0/1:7,0:6:31.87:32,0,232
chr10	23161871	.	ACACACACACC	A	2679.18	PASS	AB=1.000;AC=24;AF=0.429;AN=56;BaseQRankSum=1.138;DP=586;FS=3.604;HRun=0;HaplotypeScore=188.0541;InbreedingCoeff=0.2617;MQ=53.71;MQ0=38;MQRankSum=1.298;QD=8.14;ReadPosRankSum=-0.165;VQSLOD=2.5186;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:26:42.74:59,0,43	1/1:7,0:6:9.03:228,9,0	0/0:35,0:10:8.93:0,9,222	0/1:38,0:15:16.66:17,0,236	0/0:28,0:27:39.83:0,40,335	0/1:17,0:17:88.47:88,0,201	0/0:18,0:18:20.89:0,21,167	1/1:20,0:18:32.75:289,33,0	0/0:21,0:20:32.84:0,33,317	0/0:18,0:16:36.03:0,36,258	0/1:22,0:20:30.52:31,0,400	0/0:29,0:28:28.25:0,28,367	0/0:26,0:23:22.59:0,23,282	0/0:19,0:19:15.75:0,16,225	1/1:20,0:19:18.06:455,18,0	1/1:21,0:21:11.99:303,12,0	0/1:15,0:15:2.15:120,0,2	1/1:9,0:8:14.27:89,14,0	1/1:5,11:14:35.92:504,36,0	1/1:3,15:17:9.03:208,9,0	0/1:19,0:15:4.86:111,0,5	0/0:18,0:16:15.95:0,16,94	0/1:25,0:24:36.29:36,0,213	0/0:21,0:21:2.41:0,2,154	0/0:24,0:24:44.43:0,44,421	0/1:32,0:31:48.45:265,0,48	0/1:15,0:14:15.69:30,0,16	0/1:7,0:6:34.16:38,0,34
chr10	23161875	.	ACACACC	A	5371.61	PASS	AB=0.978;AC=39;AF=0.696;AN=56;BaseQRankSum=4.276;DP=586;FS=23.323;HRun=0;HaplotypeScore=152.5558;InbreedingCoeff=-0.2731;MQ=54.44;MQ0=35;MQRankSum=-6.138;QD=9.73;ReadPosRankSum=5.027;VQSLOD=2.2822;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:27,1:27:2.20:231,0,2	1/1:6,0:5:9.03:144,9,0	0/0:34,0:11:11.93:0,12,255	0/1:38,0:15:16.66:17,0,236	0/1:31,0:30:99:170,0,219	0/1:18,0:18:99:158,0,146	0/1:17,0:17:63.98:64,0,108	1/1:19,0:17:40.59:331,41,0	0/1:20,1:20:99:127,0,190	0/1:16,3:17:99:344,0,135	0/1:21,0:19:99:140,0,120	0/1:28,1:28:99:190,0,253	0/1:26,1:24:99:247,0,133	0/1:19,1:20:99:198,0,140	1/1:17,0:16:17.71:287,18,0	1/1:20,0:20:11.77:192,12,0	1/1:15,0:15:23.28:173,23,0	1/1:9,0:8:17.37:115,17,0	1/1:16,0:14:35.91:360,36,0	1/1:18,0:17:8.96:95,9,0	1/1:19,0:15:17.82:138,18,0	0/1:18,0:16:8.32:166,0,8	0/1:25,0:24:99:197,0,145	0/1:18,0:18:29.95:30,0,81	0/1:26,0:26:99:200,0,246	1/1:5,27:31:72.11:725,72,0	1/1:5,10:14:6.43:120,6,0	1/1:8,1:8:20.98:214,21,0
chr10	23161879	.	ACC	A	2366.55	PASS	AB=0.986;AC=32;AF=0.571;AN=56;BaseQRankSum=1.098;DP=566;FS=15.265;HRun=3;HaplotypeScore=134.8006;InbreedingCoeff=0.4131;MQ=55.26;MQ0=34;MQRankSum=-2.057;QD=6.47;ReadPosRankSum=-0.338;VQSLOD=-0.7150;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:26,1:26:0.16:185,0,0	1/1:6,0:5:8.90:60,9,0	0/0:33,0:11:11.93:0,12,255	0/1:39,0:16:13.62:14,0,271	0/0:31,0:30:37.22:0,37,280	0/0:16,1:17:4.28:0,4,210	0/0:16,0:16:20.78:0,21,161	1/1:19,0:17:44.93:392,45,0	0/0:21,0:20:33.70:0,34,247	0/1:19,0:17:40.17:40,0,148	0/1:21,0:19:28.38:28,0,181	0/0:31,0:30:23.56:0,24,346	0/1:23,2:22:16.90:17,0,170	0/1:19,0:19:31.25:31,0,156	1/1:17,0:16:17.80:120,18,0	1/1:19,0:19:11.85:80,12,0	1/1:13,0:13:26.83:206,27,0	1/1:9,0:8:20.79:145,21,0	1/1:13,0:12:35.80:276,36,0	1/1:16,0:15:7.16:42,7,0	1/1:19,0:15:17.82:138,18,0	0/1:17,0:15:0.10:0,0,25	0/0:24,0:23:0.01:0,0,170	0/1:18,0:18:4.19:4,0,104	0/0:27,0:27:21.95:0,22,330	1/1:28,0:27:73.20:561,73,0	1/1:13,0:12:7.99:49,8,0	1/1:9,0:8:20.95:168,21,0
chr10	23163906	.	AG	A	1558.80	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=10.679;DP=664;FS=0.000;HRun=2;HaplotypeScore=68.4485;InbreedingCoeff=0.9989;MQ=87.37;MQ0=0;MQRankSum=-4.301;QD=27.84;ReadPosRankSum=2.193;VQSLOD=3.2979;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:87.29:0,87,1303	0/0:9,0:9:27.09:0,27,404	0/0:27,0:27:55.92:0,56,873	0/0:23,0:23:56.86:0,57,692	0/0:23,0:23:66.21:0,66,968	0/0:18,0:18:54.17:0,54,790	0/0:16,0:16:48.16:0,48,719	0/0:38,0:38:99:0,111,1590	0/0:22,0:22:63.20:0,63,925	0/0:21,0:21:63.21:0,63,943	0/0:25,0:25:72.20:0,72,1003	0/0:29,0:29:87.29:0,87,1303	0/0:27,0:27:81.24:0,81,1154	0/0:18,0:18:51.14:0,51,706	1/1:1,26:27:63.19:735,63,0	1/1:0,29:29:81.24:945,81,0	0/0:24,0:24:72.24:0,72,1078	0/0:11,0:11:33.11:0,33,494	0/0:10,0:10:30.10:0,30,448	0/0:28,0:28:78.24:0,78,1128	0/0:28,0:28:84.27:0,84,1235	0/0:22,0:22:66.21:0,66,966	0/0:25,0:25:75.24:0,75,1102	0/0:21,0:21:63.18:0,63,879	0/0:30,0:30:84.27:0,84,1239	0/0:28,0:28:84.26:0,84,1233	0/0:42,0:41:99:0,123,1779	0/0:11,0:11:33.08:0,33,453
chr10	23167132	.	A	ATT	5135.85	PASS	AB=1.000;AC=20;AF=0.357;AN=56;BaseQRankSum=12.980;DP=613;FS=3.836;HRun=1;HaplotypeScore=92.1247;InbreedingCoeff=0.8502;MQ=75.67;MQ0=0;MQRankSum=-2.379;QD=25.68;ReadPosRankSum=2.863;VQSLOD=3.9851;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,16:16:39.13:664,39,0	1/1:0,8:8:21.03:326,21,0	0/0:15,0:15:39.12:0,39,523	0/0:11,0:11:8.81:0,9,360	0/0:30,0:30:87.25:0,87,1262	0/0:40,0:40:99:0,120,1765	0/0:17,0:17:51.16:0,51,757	0/0:43,0:43:59.92:0,60,511	0/0:19,0:19:54.18:0,54,821	0/0:17,0:16:48.14:0,48,680	0/0:32,0:32:96.30:0,96,1417	0/0:17,0:17:51.08:0,51,651	0/0:29,0:29:84.26:0,84,1240	0/0:23,0:23:69.21:0,69,1011	1/1:3,0:22:53.87:437,54,0	1/1:0,0:18:44.90:363,45,0	1/1:1,18:17:36.09:613,36,0	1/1:1,7:8:15.05:253,15,0	1/1:5,10:16:33.71:484,34,0	1/1:4,35:39:96.09:1582,96,0	1/1:0,11:11:24.04:377,24,0	0/0:26,0:26:78.23:0,78,1149	0/0:24,0:24:63.18:0,63,919	0/0:18,0:18:54.16:0,54,801	0/0:25,0:25:75.25:0,75,1146	0/0:27,0:27:25.26:0,25,169	0/1:30,0:30:13.92:14,0,42	0/1:13,0:13:6.44:23,0,6
chr10	23167134	.	A	ATT	9739.47	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=2.054;DP=618;FS=1.389;HRun=5;HaplotypeScore=76.9980;InbreedingCoeff=0.9789;MQ=75.54;MQ0=0;MQRankSum=-2.028;QD=36.34;ReadPosRankSum=-0.152;VQSLOD=4.3858;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:15:39.13:665,39,0	1/1:9,0:9:24.03:351,24,0	0/0:13,0:13:36.10:0,36,420	0/0:12,0:12:22.07:0,22,329	0/0:31,0:31:87.17:0,87,1021	0/0:39,0:39:99:0,114,1382	0/0:18,0:18:51.11:0,51,595	1/1:8,33:41:96.29:1598,96,0	0/0:20,0:20:54.14:0,54,659	0/0:17,0:16:45.13:0,45,553	0/0:33,0:33:87.22:0,87,1064	0/0:17,0:17:48.08:0,48,543	0/0:29,0:29:81.18:0,81,971	0/0:24,0:24:52.20:0,52,830	1/1:24,0:24:59.85:483,60,0	1/1:18,0:18:44.90:363,45,0	1/1:18,0:16:36.12:614,36,0	1/1:9,0:9:15.05:257,15,0	1/1:15,0:15:33.06:457,33,0	1/1:38,0:38:96.24:1560,96,0	1/1:11,0:11:24.03:377,24,0	0/0:27,0:27:81.12:0,81,970	0/0:25,0:25:65.95:0,66,744	0/0:18,0:18:51.12:0,51,619	0/0:27,0:27:72.21:0,72,903	1/1:4,25:29:4.83:1181,5,0	1/1:2,27:29:69.24:1207,69,0	1/1:1,11:12:36.12:627,36,0
chr10	23167577	.	AT	A	6063.10	PASS	AB=0.875;AC=23;AF=0.411;AN=56;BaseQRankSum=15.536;DP=688;FS=0.966;HRun=9;HaplotypeScore=64.4577;InbreedingCoeff=0.9329;MQ=70.93;MQ0=0;MQRankSum=-1.155;QD=22.05;ReadPosRankSum=-0.585;VQSLOD=5.4185;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,15:19:30:275,30,0	1/1:0,16:16:39.02:357,39,0	0/1:6,1:7:9.42:9,0,145	0/0:13,0:12:24.07:0,24,268	0/0:44,1:46:95.73:0,96,1337	0/0:25,1:26:50.76:0,51,838	0/0:16,0:16:42.12:0,42,485	1/1:5,26:31:75.03:685,75,0	0/0:17,0:17:45.12:0,45,509	0/0:35,0:36:93.11:0,93,1053	0/0:23,0:23:57.17:0,57,658	0/0:23,0:24:60:0,60,663	0/0:20,0:21:54.03:0,54,603	0/0:27,0:28:81.07:0,81,914	0/0:31,0:32:81.07:0,81,915	0/0:33,0:33:96.28:0,96,1107	1/1:1,18:19:51.03:466,51,0	1/1:2,18:20:54.03:493,54,0	1/1:5,16:21:48.02:439,48,0	1/1:5,33:38:99:906,99,0	1/1:3,15:18:33.02:302,33,0	0/0:21,0:21:51.15:0,51,589	0/0:29,1:30:50.75:0,51,825	0/0:22,0:22:60.12:0,60,667	0/0:23,2:25:22.79:0,23,736	1/1:4,31:35:64.99:813,65,0	1/1:1,36:37:99:934,102,0	1/1:0,14:14:42.02:384,42,0
chr10	23169434	.	CA	C	827.61	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.254;DP=451;FS=0.000;HRun=7;HaplotypeScore=45.9529;InbreedingCoeff=0.8784;MQ=64.84;MQ0=2;MQRankSum=1.751;QD=23.65;ReadPosRankSum=1.803;VQSLOD=3.3378;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:57.17:0,57,704	0/0:6,0:6:18.06:0,18,226	0/0:12,1:8:9.12:0,9,191	0/0:12,0:9:17.42:0,17,207	0/0:11,0:11:33.10:0,33,404	0/0:13,0:13:36.11:0,36,446	0/0:15,0:15:36.07:0,36,435	0/0:25,0:25:66.20:0,66,819	0/0:18,0:18:51.16:0,51,642	0/0:19,0:19:42.30:0,42,664	0/0:9,0:9:27.09:0,27,340	0/0:15,0:15:36.09:0,36,427	0/0:16,0:16:39.11:0,39,467	0/0:18,0:18:51.16:0,51,641	1/1:0,17:17:45.10:459,45,0	1/1:0,18:18:48.11:490,48,0	0/0:20,0:20:51.16:0,51,641	0/0:29,0:29:78.25:0,78,981	0/0:25,0:25:66.19:0,66,798	0/0:14,0:14:39.12:0,39,490	0/0:16,0:16:45.13:0,45,552	0/0:6,0:6:18.06:0,18,226	0/0:11,0:11:30.10:0,30,378	0/0:18,0:18:51.16:0,51,641	0/0:9,0:9:21.07:0,21,264	0/0:17,0:17:48.13:0,48,578	0/0:32,0:32:96.29:0,96,1195	0/0:1,0:1:3.01:0,3,38
chr10	23169985	.	AACACACAC	A	2865.94	PASS	AB=0.798;AC=4;AF=0.071;AN=56;BaseQRankSum=1.467;DP=538;FS=14.287;HRun=0;HaplotypeScore=159.8628;InbreedingCoeff=-0.0692;MQ=59.24;MQ0=14;MQRankSum=-2.027;QD=34.12;ReadPosRankSum=0.830;VQSLOD=2.5579;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:51.17:0,51,934	0/0:5,0:5:5.49:0,5,31	0/0:24,0:13:18.05:0,18,483	0/0:25,0:11:24.20:0,24,515	0/0:6,0:15:3.01:0,3,108	0/0:21,0:21:45.14:0,45,944	0/0:29,0:28:57.17:0,57,922	0/1:11,13:26:66.85:895,0,67	0/0:14,0:13:36.12:0,36,790	0/0:14,0:13:30.10:0,30,663	0/0:14,0:14:24.07:0,24,455	0/0:20,0:20:27.08:0,27,581	0/0:25,0:26:60.18:0,60,1362	0/0:21,0:21:33.11:0,33,740	0/0:19,0:19:33.11:0,33,963	0/0:18,0:17:3.01:0,3,103	0/0:15,0:15:10.94:0,11,143	0/0:17,0:17:14.49:0,14,186	0/0:18,0:15:21.20:0,21,427	0/0:19,0:19:17.23:0,17,253	0/0:16,0:16:17.96:0,18,198	0/0:16,0:16:30.09:0,30,591	0/0:11,0:9:12.04:0,12,278	0/0:27,0:27:45.15:0,45,1142	0/0:19,0:18:18.06:0,18,465	0/1:21,6:27:16.58:1191,0,17	0/1:12,2:15:14.19:644,0,14	0/1:14,2:15:16.73:244,0,17
chr10	23169993	.	C	CAT	395.59	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-3.062;DP=507;FS=13.719;HRun=0;HaplotypeScore=119.0633;InbreedingCoeff=0.7536;MQ=54.46;MQ0=15;MQRankSum=-0.698;QD=12.36;ReadPosRankSum=0.514;VQSLOD=2.7812;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:25:53.05:0,53,514	0/0:4,0:4:9.01:0,9,88	0/0:19,0:8:20.88:0,21,200	0/0:24,0:10:26.48:0,26,300	0/0:14,0:14:3:0,3,25	0/0:20,0:20:41.78:0,42,455	0/0:29,0:28:71.81:0,72,651	0/0:26,0:26:59.94:0,60,403	0/0:15,0:14:26.48:0,26,317	0/0:15,0:14:34.31:0,34,345	0/0:15,0:15:23.64:0,24,240	0/0:20,0:20:24.33:0,24,231	0/0:26,0:25:58.38:0,58,666	0/0:22,0:22:33.92:0,34,339	1/1:15,0:15:33.08:471,33,0	1/1:2,14:16:3.01:33,3,0	0/0:12,0:12:29.94:0,30,300	0/0:13,0:12:33.02:0,33,328	0/0:16,0:13:35.99:0,36,347	0/0:17,0:17:36.04:0,36,363	0/0:15,0:15:32.35:0,32,268	0/0:17,0:17:19.96:0,20,238	0/0:9,0:7:12.03:0,12,141	0/0:25,0:25:35.19:0,35,428	0/0:20,0:19:9.32:0,9,128	0/0:26,0:26:77.40:0,77,651	0/0:13,0:13:38.83:0,39,335	0/0:17,0:16:23.16:0,23,226
chr10	23170001	.	C	CAG	650.41	PASS	AB=0.939;AC=26;AF=0.464;AN=56;BaseQRankSum=-2.108;DP=468;FS=4.149;HRun=0;HaplotypeScore=109.9157;InbreedingCoeff=-0.0162;MQ=50.44;MQ0=16;MQRankSum=0.881;QD=1.96;ReadPosRankSum=0.223;VQSLOD=2.0771;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:24:2.22:78,2,0	0/0:3,0:3:2.49:0,2,5	0/0:15,0:5:11.98:0,12,136	0/0:20,0:6:13.28:0,13,168	1/1:16,0:16:2.99:24,3,0	0/1:13,1:14:42.53:43,0,54	0/1:24,0:23:32.75:49,0,33	0/0:24,0:24:29.16:0,29,134	1/1:14,2:15:2.71:84,3,0	0/0:15,0:14:5.82:0,6,37	1/1:9,0:17:1.29:23,1,0	0/1:13,8:21:3.98:77,0,4	0/1:24,1:24:35.99:36,0,46	0/1:14,7:21:24.62:74,0,25	0/1:13,0:13:0.26:6,0,0	0/0:15,0:14:0.75:0,1,2	0/1:12,0:12:10.37:10,0,39	0/0:8,0:7:4.41:0,4,11	0/0:15,0:11:6.18:0,6,33	0/1:15,0:15:3.57:13,0,4	1/1:11,0:11:0.87:55,1,0	0/1:15,1:16:33:33,0,40	0/1:10,0:8:0.03:0,0,1	0/1:25,1:26:38.58:110,0,39	1/1:11,11:21:4.37:69,4,0	0/0:21,0:21:4.13:0,4,20	0/1:13,0:13:9.37:9,0,14	1/1:15,0:14:0.76:1,1,0
chr10	23170048	.	A	AAAGC	3681.05	PASS	AB=1.000;AC=12;AF=0.214;AN=56;BaseQRankSum=-3.961;DP=560;FS=26.677;HRun=0;HaplotypeScore=130.1209;InbreedingCoeff=0.5502;MQ=63.62;MQ0=13;MQRankSum=1.163;QD=21.40;ReadPosRankSum=0.099;VQSLOD=1.7197;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:32:36.49:0,36,712	0/0:4,0:4:9.03:0,9,149	0/0:29,0:17:46.52:0,47,731	0/0:33,0:16:31.35:0,31,504	0/0:10,0:10:9.50:0,10,150	0/0:13,0:13:23.11:0,23,331	0/0:27,0:27:67.77:0,68,963	1/1:39,0:39:62.01:1365,62,0	0/0:13,0:13:20.28:0,20,225	0/0:13,0:11:28.66:0,29,406	0/1:20,0:20:8.81:9,0,345	0/0:16,0:16:23.54:0,24,278	0/0:19,0:19:47.98:0,48,606	0/0:21,0:21:35.95:0,36,530	1/1:22,0:22:45.61:733,46,0	1/1:19,0:18:38.72:650,39,0	0/0:17,0:17:37.34:0,37,498	0/0:13,0:13:38.24:0,38,500	0/1:18,0:18:18.29:18,0,616	0/0:26,0:26:42.75:0,43,648	0/0:19,0:19:32.38:0,32,467	0/0:12,0:12:26.35:0,26,354	0/0:16,0:15:30.07:0,30,397	0/0:24,0:24:35.26:0,35,458	0/0:30,0:30:59.43:0,59,879	0/1:22,0:22:9.78:574,0,10	1/1:5,14:20:5.39:102,5,0	0/1:12,0:12:34.53:230,0,35
chr10	23173958	.	G	GTTTAAATAGTGTAGAAACCACTG	1015.35	PASS	AB=0.675;AC=20;AF=0.909;AN=22;BaseQRankSum=-2.012;DP=25;FS=3.010;HRun=0;HaplotypeScore=23.1604;InbreedingCoeff=-0.2713;MQ=156.58;MQ0=0;MQRankSum=-1.714;QD=48.35;ReadPosRankSum=-0.224;VQSLOD=1.5659;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,0:1:3.01:49,3,0	./.	0/1:1,1:3:38.14:303,0,38	0/1:4,0:6:19.98:270,0,20	1/1:1,0:1:3.01:74,3,0	./.	./.	./.	./.	./.	./.	1/1:1,0:1:3:25,3,0	./.	./.	1/1:2,0:2:3.01:38,3,0	1/1:1,0:1:3.01:60,3,0	./.	./.	./.	1/1:2,0:2:6.01:131,6,0	1/1:1,0:1:3.01:43,3,0	./.	./.	./.	./.	1/1:1,0:1:2.99:23,3,0	1/1:2,0:2:6.01:84,6,0	./.
chr10	23174254	.	C	CATATATAT	1401.80	PASS	AB=1.000;AC=8;AF=0.143;AN=56;BaseQRankSum=5.469;DP=558;FS=6.161;HRun=0;HaplotypeScore=178.3437;InbreedingCoeff=0.4244;MQ=63.41;MQ0=5;MQRankSum=-8.115;QD=21.24;ReadPosRankSum=-0.361;VQSLOD=2.7858;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:19:22.81:0,23,638	0/1:5,0:5:1.55:2,0,136	0/0:8,0:5:5.91:0,6,90	0/0:19,0:13:17.93:0,18,271	0/0:18,0:18:21.07:0,21,560	0/0:32,0:32:81.26:0,81,2009	0/0:14,0:14:42.14:0,42,1065	0/0:37,0:37:90.23:0,90,1191	0/0:21,0:21:51.16:0,51,1256	0/0:27,0:27:63.21:0,63,1579	0/0:10,0:10:18.06:0,18,480	0/0:25,0:25:57.19:0,57,1453	0/0:38,0:38:96.31:0,96,2375	0/0:31,0:31:75.23:0,75,1891	1/1:5,8:13:21.07:735,21,0	1/1:8,7:15:24.07:769,24,0	0/1:13,0:13:16.89:17,0,267	0/1:9,0:9:6.35:6,0,191	0/1:11,0:11:8.95:9,0,167	0/0:17,0:17:2.59:0,3,395	0/0:17,0:17:21.05:0,21,456	0/0:13,0:13:27.09:0,27,716	0/0:18,0:18:42.14:0,42,1103	0/0:26,0:26:69.24:0,69,1781	0/0:15,0:15:30.10:0,30,800	0/0:31,0:30:72.20:0,72,1007	0/0:40,0:38:78.10:0,78,939	0/0:16,0:15:30.09:0,30,376
chr10	23174266	.	C	CAT	5599.34	PASS	AB=1.000;AC=18;AF=0.321;AN=56;BaseQRankSum=-6.838;DP=600;FS=1.676;HRun=0;HaplotypeScore=110.5222;InbreedingCoeff=0.6119;MQ=57.58;MQ0=7;MQRankSum=0.034;QD=23.33;ReadPosRankSum=0.070;VQSLOD=5.3682;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:24:35.57:284,36,0	0/1:7,0:7:6.46:6,0,25	0/0:14,0:5:5.21:0,5,117	0/0:19,0:10:2.12:0,2,71	0/0:17,0:17:21.07:0,21,298	0/0:33,0:33:87.21:0,87,1142	0/0:17,0:17:48.10:0,48,610	1/1:3,36:39:99:1588,105,0	0/0:19,0:19:54.07:0,54,681	0/0:26,0:26:78.18:0,78,1010	0/0:10,0:10:18.04:0,18,232	0/0:26,0:26:72.24:0,72,1018	0/0:37,0:37:99:0,102,1326	0/0:29,0:29:79.12:0,79,1078	1/1:1,14:16:20.90:263,21,0	1/1:2,16:18:6.70:248,7,0	0/1:14,0:14:7.73:8,0,71	0/1:16,0:16:20.91:21,0,88	0/1:11,0:11:9.79:10,0,70	0/0:20,0:20:3.07:0,3,114	0/0:21,0:21:10.62:0,11,147	0/0:14,0:14:26.94:0,27,338	0/0:18,0:18:42.04:0,42,515	0/0:25,0:25:72.12:0,72,961	0/0:14,0:14:33.11:0,33,450	1/1:5,32:37:47.44:1364,47,0	1/1:3,35:38:69.24:1259,69,0	1/1:1,16:16:30.10:548,30,0
chr10	23174268	.	T	TACACAC	2382.44	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=-1.990;DP=610;FS=16.823;HRun=0;HaplotypeScore=163.0788;InbreedingCoeff=0.7508;MQ=55.57;MQ0=8;MQRankSum=-6.700;QD=15.08;ReadPosRankSum=-1.451;VQSLOD=1.9524;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,0:25:1.58:38,2,0	1/1:1,5:7:9.03:176,9,0	0/0:18,0:4:2.19:0,2,102	0/0:21,0:10:3.65:0,4,13	0/0:16,0:16:21.07:0,21,450	0/0:33,0:33:81.16:0,81,1454	0/0:17,0:17:39.11:0,39,741	0/0:38,0:38:4.51:0,5,396	0/0:19,0:19:48.09:0,48,876	0/0:26,0:26:45.21:0,45,1182	0/0:9,0:9:15.02:0,15,278	0/0:26,0:26:72.17:0,72,1375	0/0:36,0:36:87.16:0,87,1526	0/0:28,0:28:75.71:0,76,1515	1/1:17,0:17:15.94:233,16,0	0/1:18,0:18:6.93:209,0,7	1/1:6,9:17:10.61:313,11,0	1/1:14,2:17:0.07:425,0,0	1/1:4,9:14:26.65:576,27,0	1/1:7,12:21:17.88:317,18,0	1/1:22,0:22:20.84:281,21,0	0/0:14,0:14:21.05:0,21,362	0/0:18,0:18:32.96:0,33,573	0/0:25,0:25:63.16:0,63,1157	0/0:13,0:13:33:0,33,551	0/0:38,0:37:68.86:0,69,571	0/0:40,0:38:70.26:0,70,451	0/0:17,0:16:29.07:0,29,171
chr10	23174530	.	T	TAATA	2832.17	PASS	AB=0.963;AC=23;AF=0.411;AN=56;BaseQRankSum=-2.825;DP=381;FS=8.729;HRun=0;HaplotypeScore=140.9596;InbreedingCoeff=0.0914;MQ=52.78;MQ0=2;MQRankSum=1.180;QD=16.28;ReadPosRankSum=0.454;VQSLOD=2.7168;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:23:33:33,0,358	1/1:2,5:10:16.21:356,16,0	0/0:10,0:5:12.03:0,12,170	0/0:15,0:9:19.87:0,20,306	0/1:8,0:8:5.62:6,0,88	0/1:6,0:6:20.08:20,0,107	0/1:4,0:4:1.20:1,0,111	0/0:29,0:29:78.21:0,78,1170	0/1:4,0:4:27.29:27,0,41	0/1:10,0:10:63.26:63,0,152	0/1:5,0:5:27.79:28,0,132	0/1:7,0:7:36.40:36,0,75	0/1:5,0:5:2.34:2,0,155	0/1:13,0:13:31.43:31,0,192	0/0:34,0:34:72.23:0,72,1153	0/0:25,0:25:42.12:0,42,639	0/1:1,10:13:10.39:420,0,10	1/1:4,13:19:36.34:774,36,0	1/1:2,8:11:27.97:457,28,0	1/1:4,7:11:23.46:304,23,0	1/1:1,6:9:15.05:378,15,0	0/0:6,0:6:14.83:0,15,199	0/1:5,0:5:10.91:11,0,40	0/0:4,0:4:6.02:0,6,98	0/1:11,0:11:65.85:66,0,179	0/0:34,0:34:93.30:0,93,1491	0/0:37,0:37:81.26:0,81,1298	0/0:12,0:11:21.06:0,21,305
chr10	23176611	.	C	CGGGGCATGA	71712.53	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-8.390;DP=784;FS=0.000;HRun=0;HaplotypeScore=199.6410;InbreedingCoeff=0.9866;MQ=76.35;MQ0=0;MQRankSum=-13.033;QD=100.58;ReadPosRankSum=5.151;VQSLOD=5.0027;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:16,14:31:63.22:2868,63,0	1/1:3,10:15:36.12:1739,36,0	0/0:41,0:40:99:0,105,2947	0/0:30,0:29:81.28:0,81,2217	1/1:13,19:40:42.14:2023,42,0	1/1:5,15:21:39.13:1859,39,0	1/1:15,10:26:66.23:2804,66,0	1/1:24,23:52:99:5924,147,0	1/1:13,17:31:72.25:3361,72,0	1/1:6,23:31:87.26:3803,87,0	1/1:5,14:20:39.13:1886,39,0	1/1:10,17:28:69.24:3161,69,0	1/1:8,27:37:96:4443,96,0	1/1:12,16:28:69.18:2955,69,0	1/1:14,21:38:93.32:4236,93,0	1/1:4,23:28:75.21:3441,75,0	1/1:6,13:22:48.16:2152,48,0	1/1:7,4:12:18.06:738,18,0	1/1:17,11:33:87.21:3189,87,0	1/1:5,15:21:40.98:1828,41,0	1/1:8,10:22:24.08:1161,24,0	1/1:8,16:24:45.07:1918,45,0	1/1:3,16:22:45.02:2084,45,0	1/1:11,12:23:42.14:1959,42,0	1/1:12,20:33:78.22:3543,78,0	1/1:17,15:34:90.31:3967,90,0	1/1:19,14:36:90.14:3990,90,0	1/1:2,3:5:15.05:681,15,0
chr10	23178116	.	CT	C	7620.65	PASS	AB=0.899;AC=40;AF=0.714;AN=56;BaseQRankSum=10.140;DP=536;FS=3.956;HRun=10;HaplotypeScore=59.0354;InbreedingCoeff=0.7737;MQ=73.87;MQ0=0;MQRankSum=-1.669;QD=18.68;ReadPosRankSum=1.812;VQSLOD=5.8444;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:78.18:0,78,845	0/0:1,0:1:3.01:0,3,33	0/1:15,1:14:7.87:8,0,188	0/0:8,1:9:6.02:0,6,71	1/1:4,19:23:53.93:462,54,0	1/1:4,14:18:11.81:331,12,0	1/1:0,11:11:29.99:260,30,0	1/1:8,14:23:40.97:335,41,0	1/1:1,16:17:47.99:417,48,0	1/1:5,20:25:56.91:482,57,0	1/1:3,25:28:71.98:625,72,0	1/1:2,21:23:50.95:443,51,0	1/1:0,17:17:50.99:443,51,0	1/1:3,16:19:41.97:365,42,0	1/1:0,15:15:44.99:391,45,0	1/1:4,20:24:59.98:521,60,0	0/1:25,5:30:43.03:43,0,709	0/0:16,0:16:36.07:0,36,387	0/0:19,2:22:10.87:0,11,545	0/0:29,2:33:19.75:0,20,640	0/0:18,0:18:47.71:0,48,499	1/1:1,11:12:26.98:234,27,0	1/1:2,12:14:32.99:286,33,0	1/1:0,17:17:44.99:391,45,0	1/1:4,15:19:38.99:339,39,0	1/1:2,15:17:44.97:388,45,0	1/1:3,17:20:47.99:417,48,0	1/1:2,18:20:50.99:443,51,0
chr10	23178323	.	A	AT	4337.48	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-1.566;DP=599;FS=0.000;HRun=8;HaplotypeScore=65.5669;InbreedingCoeff=0.9960;MQ=75.86;MQ0=0;MQRankSum=-0.915;QD=27.80;ReadPosRankSum=-0.384;VQSLOD=5.1360;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:78.03:0,78,714	0/0:9,0:9:27.01:0,27,247	0/0:15,0:15:21.64:0,22,201	0/0:12,0:12:17.46:0,17,186	0/0:25,0:25:59.98:0,60,538	0/0:17,0:17:44.97:0,45,396	0/0:19,0:19:54.03:0,54,494	1/1:4,30:34:87.21:973,87,0	0/0:15,0:15:36.02:0,36,329	0/0:30,0:30:75.03:0,75,684	0/0:21,0:21:60.03:0,60,549	0/0:18,0:18:42:0,42,384	0/0:25,0:25:75.03:0,75,681	0/0:20,0:20:50.96:0,51,457	1/1:3,20:23:51.15:589,51,0	1/1:2,22:23:51.15:589,51,0	0/0:23,0:23:66.03:0,66,604	0/0:15,0:15:45:0,45,406	0/0:28,0:29:64.16:0,64,622	0/0:17,0:17:42:0,42,380	0/0:7,0:7:21.01:0,21,192	0/0:21,0:21:63.02:0,63,571	0/0:28,0:28:83.96:0,84,754	0/0:20,0:20:25.20:0,25,364	0/0:23,0:24:59.05:0,59,528	1/1:3,27:30:56.72:873,57,0	1/1:4,24:27:69.20:795,69,0	1/1:1,16:17:45.13:519,45,0
chr10	23179058	.	GAA	G	4584.50	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=10.810;DP=487;FS=3.347;HRun=11;HaplotypeScore=67.0491;InbreedingCoeff=0.9085;MQ=69.96;MQ0=2;MQRankSum=-1.765;QD=23.39;ReadPosRankSum=-0.489;VQSLOD=4.4531;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,14:15:33.08:351,33,0	1/1:0,5:5:15.04:160,15,0	0/0:5,0:6:5.51:0,6,55	0/1:7,0:7:14.13:14,0,76	0/0:35,0:36:95.79:0,96,1398	0/0:24,0:25:66.21:0,66,978	0/0:7,0:7:18.06:0,18,277	1/1:7,25:32:75.13:788,75,0	0/0:21,0:21:57.18:0,57,838	0/0:7,0:16:26.23:0,26,147	0/0:17,0:19:44.62:0,45,600	0/0:13,0:13:33.10:0,33,487	0/0:19,0:19:51.15:0,51,746	0/0:15,0:16:47.64:0,48,681	0/0:2,0:18:32.44:0,32,111	0/0:3,0:21:44.79:0,45,154	1/1:3,19:21:45.11:479,45,0	1/1:3,17:20:51.11:543,51,0	1/1:4,13:17:39.07:408,39,0	1/1:2,15:17:36.04:383,36,0	1/1:2,9:11:24.05:255,24,0	0/0:15,0:16:45.14:0,45,672	0/0:28,0:28:72.24:0,72,1106	0/0:12,0:12:27.09:0,27,416	0/0:16,0:18:47.13:0,47,664	1/1:2,15:17:45.08:469,45,0	1/1:4,20:24:45.10:479,45,0	1/1:0,8:8:24.06:255,24,0
chr10	23179158	.	AG	A	11215.91	PASS	AB=0.929;AC=31;AF=0.554;AN=56;BaseQRankSum=13.305;DP=535;FS=2.259;HRun=1;HaplotypeScore=55.4337;InbreedingCoeff=0.9339;MQ=80.40;MQ0=1;MQRankSum=-1.314;QD=36.06;ReadPosRankSum=4.646;VQSLOD=4.9499;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:51.17:0,51,815	0/0:10,0:10:30.10:0,30,480	0/0:14,0:14:35.30:0,35,576	0/0:13,0:13:27.87:0,28,311	1/1:1,24:25:75.22:1028,75,0	1/1:0,27:27:78.26:1090,78,0	1/1:0,7:7:18.06:252,18,0	0/0:39,0:39:99:0,114,1770	1/1:0,16:16:42.14:587,42,0	1/1:1,27:28:84.28:1162,84,0	1/1:0,25:25:66.22:923,66,0	1/1:0,15:15:42.14:587,42,0	1/1:0,16:16:45.15:629,45,0	1/1:0,10:10:27.09:377,27,0	1/1:0,20:20:51.17:713,51,0	1/1:0,19:19:51.17:713,51,0	0/0:17,0:17:48.16:0,48,767	0/0:18,0:18:48.16:0,48,754	0/0:21,0:21:63.17:0,63,979	0/0:28,0:28:84.29:0,84,1342	0/0:12,0:12:36.12:0,36,575	1/1:0,13:13:39.13:545,39,0	1/1:0,30:30:87.29:1217,87,0	1/1:0,12:12:33.11:461,33,0	1/1:0,22:22:66.22:923,66,0	0/1:24,2:25:8.63:9,0,1028	0/0:29,0:29:87.28:0,87,1366	0/0:6,0:5:18.06:0,18,288
chr10	23179793	.	TCTC	T	2525.29	PASS	AB=0.975;AC=18;AF=0.321;AN=56;BaseQRankSum=3.332;DP=628;FS=10.905;HRun=0;HaplotypeScore=165.5264;InbreedingCoeff=0.1456;MQ=75.22;MQ0=11;MQRankSum=-2.299;QD=7.94;ReadPosRankSum=2.954;VQSLOD=2.6082;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,102,1835	0/0:11,0:11:24.07:0,24,455	0/1:30,0:19:17.85:18,0,111	0/0:39,0:21:25.86:0,26,236	0/1:26,0:26:13.58:213,0,14	0/0:30,0:28:32.78:0,33,115	0/1:17,1:17:35.10:35,0,63	0/0:26,0:24:27.06:0,27,408	0/1:10,1:11:25.65:28,0,26	1/1:18,0:18:15.29:289,15,0	1/1:17,0:17:3.33:118,3,0	0/1:27,1:28:27.23:27,0,41	0/0:25,0:25:13.63:0,14,95	0/0:11,0:11:5.83:0,6,31	1/1:12,18:30:79.85:995,80,0	1/1:12,12:23:60.05:769,60,0	0/1:25,1:26:25.19:25,0,1075	0/0:11,0:11:24.08:0,24,457	0/0:19,0:19:36.12:0,36,668	0/0:24,0:23:54.16:0,54,989	0/0:31,0:29:72.08:0,72,1246	0/1:17,0:17:23.50:45,0,24	0/1:21,0:21:9.68:46,0,10	0/1:23,1:24:43.37:43,0,79	0/1:28,0:28:30.71:53,0,31	0/0:24,0:24:60.16:0,60,950	0/0:11,0:11:20.94:0,21,334	0/0:8,0:8:21.04:0,21,275
chr10	23179803	.	C	CTCT	10158.84	PASS	AB=1.000;AC=32;AF=0.571;AN=56;BaseQRankSum=6.657;DP=631;FS=5.551;HRun=0;HaplotypeScore=144.1652;InbreedingCoeff=0.5842;MQ=69.62;MQ0=21;MQRankSum=1.477;QD=23.63;ReadPosRankSum=3.132;VQSLOD=4.8673;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,107,1675	0/0:9,0:9:27.07:0,27,406	0/1:30,0:16:2.68:3,0,126	0/0:40,0:16:21.03:0,21,228	1/1:3,26:29:62.69:978,63,0	1/1:3,26:28:27.17:948,27,0	1/1:5,16:21:33.58:696,34,0	0/1:18,0:16:13.85:14,0,290	1/1:1,10:12:21.07:445,21,0	1/1:1,20:21:59.94:984,60,0	1/1:2,18:20:26.92:423,27,0	1/1:4,23:26:35.38:781,35,0	1/1:2,23:25:44.58:1034,45,0	1/1:4,9:12:18.06:397,18,0	0/1:28,0:28:34.61:175,0,35	0/1:23,0:21:9.25:240,0,9	0/0:26,0:26:37.58:0,38,982	0/0:10,0:10:7.65:0,8,420	0/0:19,0:18:45.11:0,45,663	0/0:21,0:20:57.16:0,57,877	0/0:28,0:26:75.10:0,75,1097	1/1:2,16:18:35.83:618,36,0	1/1:0,19:19:18.06:397,18,0	1/1:3,21:24:38.43:1050,38,0	1/1:1,27:29:36.12:797,36,0	0/1:25,0:24:99:140,0,458	0/1:14,0:14:39.53:40,0,129	0/0:8,0:8:20.83:0,21,248
chr10	23179809	.	T	TTCCTCC	8549.97	PASS	AB=1.000;AC=36;AF=0.643;AN=56;BaseQRankSum=5.043;DP=624;FS=13.591;HRun=0;HaplotypeScore=182.4953;InbreedingCoeff=0.6562;MQ=61.68;MQ0=28;MQRankSum=2.233;QD=20.80;ReadPosRankSum=-0.589;VQSLOD=3.6407;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:42:87.65:0,88,1675	0/0:8,0:8:21.06:0,21,387	0/0:24,0:10:4.09:0,4,63	0/0:42,0:15:17.59:0,18,249	1/1:28,0:25:54.46:715,54,0	1/1:28,0:26:45.14:716,45,0	1/1:21,0:20:38.42:506,38,0	1/1:21,0:18:22.25:252,22,0	1/1:11,0:11:20.74:307,21,0	1/1:21,0:21:50.95:698,51,0	1/1:17,0:17:26.73:312,27,0	1/1:26,0:25:35.69:542,36,0	1/1:26,0:26:54.55:780,55,0	1/1:14,0:12:21.05:296,21,0	0/1:30,0:30:7.58:8,0,608	0/1:25,0:23:13.23:13,0,450	0/0:26,0:26:66.16:0,66,1280	0/1:11,0:11:31.41:31,0,341	0/0:20,0:18:36.08:0,36,587	0/0:22,0:21:48.15:0,48,927	0/0:27,0:25:63.22:0,63,1271	1/1:17,0:16:24.08:415,24,0	1/1:19,0:19:23.18:327,23,0	0/1:25,0:25:49.36:698,0,49	1/1:26,0:26:39.11:582,39,0	1/1:7,16:23:45.06:985,45,0	1/1:2,12:15:9.77:299,10,0	1/1:6,0:6:5.97:67,6,0
chr10	23179813	.	TCCTCCTCCTCTTCCTCCTC	T	5126.06	PASS	AB=0.946;AC=9;AF=0.161;AN=56;BaseQRankSum=4.167;DP=622;FS=0.979;HRun=0;HaplotypeScore=304.7516;InbreedingCoeff=0.2607;MQ=59.69;MQ0=30;MQRankSum=-5.858;QD=33.72;ReadPosRankSum=-2.137;VQSLOD=2.8184;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:41:80:0,80,6944	0/0:8,0:8:21.06:0,21,1328	0/0:30,0:13:23.44:0,23,610	0/0:40,0:14:22.39:0,22,798	0/1:28,0:25:37.13:37,0,2549	0/0:29,0:27:48.16:0,48,3300	0/0:20,0:19:1.45:0,1,2196	0/1:22,0:18:59.74:60,0,420	0/0:11,0:11:9.70:0,10,1433	0/0:21,0:21:8.46:0,8,2228	0/1:18,0:18:23.51:24,0,1091	0/0:27,0:26:22.63:0,23,2293	0/0:26,0:26:58.58:0,59,3297	0/0:14,0:12:24.08:0,24,1458	1/1:14,17:31:74.11:2992,74,0	0/1:17,10:25:8.38:1972,0,8	0/0:25,0:25:67.47:0,67,4908	0/0:11,0:11:27.07:0,27,1526	0/0:20,0:18:39.13:0,39,2333	0/0:20,0:19:48.16:0,48,3379	0/0:27,0:25:69.24:0,69,5318	0/0:17,0:16:19.42:0,19,1728	0/0:17,0:17:6.94:0,7,1064	0/0:25,0:25:9.29:0,9,3564	0/0:25,0:25:19.81:0,20,2204	0/1:21,0:20:10.47:10,0,1810	0/0:14,0:14:15.66:0,16,781	1/1:5,0:5:5.75:31,6,0
chr10	23179828	.	TCCTC	T	1864.52	PASS	AB=0.855;AC=4;AF=0.071;AN=56;BaseQRankSum=7.780;DP=577;FS=2.646;HRun=0;HaplotypeScore=161.2814;InbreedingCoeff=0.4242;MQ=55.48;MQ0=23;MQRankSum=-9.360;QD=32.15;ReadPosRankSum=2.408;VQSLOD=3.5978;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:42:99:0,99,2863	0/0:7,0:7:18.06:0,18,439	0/0:27,0:13:36.05:0,36,769	0/0:34,0:16:39.60:0,40,903	0/0:24,0:21:40.72:0,41,1298	0/0:27,0:25:60.20:0,60,1376	0/0:21,0:21:45.15:0,45,1063	0/0:22,0:20:5.02:0,5,902	0/0:11,0:11:27.09:0,27,664	0/0:15,0:15:34.52:0,35,862	0/0:15,0:15:27.09:0,27,663	0/0:25,0:24:50.72:0,51,1098	0/0:25,0:25:52.51:0,53,1120	0/0:17,0:15:36.07:0,36,878	1/1:17,7:24:66.23:1134,66,0	0/1:13,9:21:18.29:835,0,18	0/0:27,0:27:72.24:0,72,1661	0/1:12,0:12:0.01:0,0,568	0/0:19,0:16:45.15:0,45,1107	0/0:19,0:18:48.16:0,48,1101	0/0:25,0:24:72.25:0,72,1749	0/0:15,0:14:28.45:0,28,724	0/0:15,0:15:20.44:0,20,775	0/0:26,0:26:27.90:0,28,1245	0/0:20,0:20:38.12:0,38,945	0/0:20,0:19:10.63:0,11,1002	0/0:14,0:14:20.74:0,21,378	0/0:6,0:6:0.79:0,1,100
chr10	23180933	.	GAA	G	13225.76	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=9.440;DP=719;FS=0.928;HRun=7;HaplotypeScore=116.0138;InbreedingCoeff=0.9994;MQ=78.34;MQ0=0;MQRankSum=0.343;QD=33.06;ReadPosRankSum=4.584;VQSLOD=4.1274;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:69.19:0,69,1162	0/0:8,0:8:24.08:0,24,420	0/0:26,0:27:63.12:0,63,929	0/0:14,0:14:39.04:0,39,600	1/1:7,31:38:84.25:1069,84,0	1/1:0,28:28:72.23:918,72,0	1/1:1,19:20:51.16:650,51,0	0/0:35,0:35:99:0,102,1746	1/1:2,18:20:51.16:650,51,0	1/1:2,27:29:78.24:994,78,0	1/1:3,22:25:63.19:803,63,0	1/1:2,25:27:72.23:918,72,0	1/1:1,29:30:81.26:1032,81,0	1/1:2,33:35:99:1260,99,0	1/1:2,25:27:69.22:879,69,0	1/1:2,18:20:48.07:612,48,0	0/0:45,0:45:99:0,120,1987	0/0:26,0:26:72.25:0,72,1250	0/0:22,0:22:66.22:0,66,1128	0/0:36,0:36:99:0,99,1731	0/0:14,0:14:39.13:0,39,678	1/1:1,40:41:99:1415,111,0	1/1:2,16:18:48.15:612,48,0	1/1:0,20:20:54.17:688,54,0	1/1:3,19:22:57.18:727,57,0	0/0:24,0:24:66.21:0,66,1116	0/0:33,0:33:90.31:0,90,1573	0/0:9,0:9:24.08:0,24,411
chr10	23181981	.	T	TA	18218.45	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=3.248;DP=673;FS=6.820;HRun=5;HaplotypeScore=87.7041;InbreedingCoeff=0.9989;MQ=81.07;MQ0=0;MQRankSum=-2.645;QD=35.65;ReadPosRankSum=2.469;VQSLOD=4.5433;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:30.07:0,30,322	0/0:10,0:10:27.07:0,27,290	0/0:18,0:18:43.49:0,43,424	0/0:19,0:19:23.04:0,23,418	1/1:1,19:20:54.13:691,54,0	1/1:0,24:24:69.22:908,69,0	1/1:0,20:20:60.20:790,60,0	1/1:7,27:34:81.24:1036,81,0	1/1:3,18:21:51.17:671,51,0	1/1:2,27:29:81.25:1051,81,0	1/1:3,27:30:78.25:1026,78,0	1/1:0,33:33:99:1302,99,0	1/1:1,26:27:75.24:987,75,0	1/1:1,26:27:72.23:947,72,0	1/1:2,33:34:87.28:1144,87,0	1/1:1,32:33:90.29:1184,90,0	0/0:14,0:14:33.08:0,33,354	0/0:13,0:13:33.06:0,33,346	0/0:21,0:21:54.13:0,54,579	0/0:40,0:40:99:0,114,1225	0/0:15,0:15:39.07:0,39,409	1/1:1,26:27:78.25:1025,78,0	1/1:1,29:30:81.26:1066,81,0	1/1:5,22:26:66.21:869,66,0	1/1:2,27:29:81.26:1066,81,0	1/1:0,27:27:81.24:1035,81,0	1/1:1,29:30:84.27:1105,84,0	1/1:0,8:8:24.08:316,24,0
chr10	23182250	.	C	CT	10340.30	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-14.707;DP=591;FS=6.697;HRun=5;HaplotypeScore=52.1006;InbreedingCoeff=0.9995;MQ=84.99;MQ0=0;MQRankSum=-1.221;QD=33.25;ReadPosRankSum=6.106;VQSLOD=4.6764;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:60.15:0,60,645	0/0:11,0:11:30.07:0,30,316	0/0:20,0:20:44.47:0,44,459	0/0:18,0:18:51.10:0,51,538	1/1:2,18:20:51.17:671,51,0	1/1:2,22:24:63.17:810,63,0	1/1:0,11:11:33.11:434,33,0	0/0:36,0:36:87.19:0,87,917	1/1:1,15:16:42.14:553,42,0	1/1:1,33:34:99:1287,99,0	1/1:1,17:18:48.16:632,48,0	1/1:4,16:20:48.16:632,48,0	1/1:8,24:32:78.25:1021,78,0	1/1:3,19:22:45.15:592,45,0	1/1:1,17:19:48.16:631,48,0	1/1:2,15:17:39.13:513,39,0	0/0:22,0:22:63.14:0,63,668	0/0:14,0:14:39.10:0,39,419	0/0:21,0:21:51.08:0,51,525	0/0:23,0:23:66.15:0,66,701	0/0:18,0:18:51.11:0,51,539	1/1:0,18:18:54.18:710,54,0	1/1:1,20:21:57.19:749,57,0	1/1:2,13:15:39.13:513,39,0	1/1:4,20:24:45.15:592,45,0	0/0:21,1:22:23.68:0,24,605	0/0:32,0:31:93.22:0,93,991	0/0:22,0:22:57.13:0,57,612
chr10	23182704	.	CT	C	9633.31	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=12.597;DP=663;FS=2.079;HRun=7;HaplotypeScore=104.4031;InbreedingCoeff=0.9997;MQ=88.26;MQ0=0;MQRankSum=-5.895;QD=27.06;ReadPosRankSum=5.355;VQSLOD=4.5159;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:54.17:0,54,679	0/0:10,0:10:30.09:0,30,374	0/0:32,0:32:65.11:0,65,703	0/0:20,0:20:41.76:0,42,450	1/1:0,25:25:72.16:734,72,0	1/1:3,39:42:99:1163,114,0	1/1:2,22:24:57.13:582,57,0	0/0:33,0:33:81.23:0,81,985	1/1:1,17:18:48.11:490,48,0	1/1:2,21:23:63.13:636,63,0	1/1:1,33:34:96.22:979,96,0	1/1:0,32:32:90.20:918,90,0	1/1:0,24:24:72.16:734,72,0	1/1:1,21:22:63.14:643,63,0	1/1:2,18:20:45.10:459,45,0	1/1:1,15:16:36.08:367,36,0	0/0:31,0:31:90.27:0,90,1111	0/0:19,0:19:54.14:0,54,658	0/0:26,0:26:72.18:0,72,850	0/0:27,0:27:69.19:0,69,826	0/0:11,0:11:33.10:0,33,412	1/1:2,18:20:51.11:520,51,0	1/1:2,13:15:30.07:306,30,0	1/1:3,13:16:36.08:367,36,0	1/1:0,25:25:72.16:735,72,0	0/0:26,0:26:72.23:0,72,903	0/0:41,0:40:99:0,117,1441	0/0:11,0:11:33.11:0,33,415
chr10	23183454	.	ATCTCTCTCTCTC	A	772.95	PASS	AB=0.974;AC=17;AF=0.405;AN=42;BaseQRankSum=-0.586;DP=250;FS=0.000;HRun=0;HaplotypeScore=72.2654;InbreedingCoeff=0.3057;MQ=77.09;MQ0=3;MQRankSum=-1.481;QD=8.78;ReadPosRankSum=2.652;VQSLOD=1.3551;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:7,0:7:2.47:21,2,0	./.	./.	0/0:44,0:14:7.99:0,8,64	0/0:8,0:10:3.01:0,3,50	0/0:5,0:5:3.01:0,3,74	./.	1/1:22,0:22:15.49:208,15,0	./.	0/0:4,0:6:6.02:0,6,100	./.	0/1:5,0:5:18.97:19,0,19	0/0:4,0:5:3.01:0,3,49	0/0:4,0:4:2.99:0,3,24	0/1:8,0:8:0:0,0,0	1/1:5,0:5:3:25,3,0	0/1:11,1:12:99:136,0,103	1/1:4,2:6:3.01:103,3,0	./.	./.	1/1:7,0:7:3.01:48,3,0	0/0:6,0:6:1.55:0,2,4	0/0:9,0:9:5.96:0,6,50	0/0:5,0:5:3.01:0,3,47	0/0:2,0:4:3:0,3,25	0/0:7,0:7:2.96:0,3,46	1/1:3,4:7:6.02:206,6,0	1/1:8,0:9:9:137,9,0
chr10	23183546	.	A	ATG	2210.17	PASS	AC=8;AF=0.160;AN=50;BaseQRankSum=-4.420;DP=146;FS=4.678;HRun=0;HaplotypeScore=33.7122;InbreedingCoeff=0.5073;MQ=83.61;MQ0=3;MQRankSum=0.138;QD=36.84;ReadPosRankSum=2.537;VQSLOD=4.9636;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:2,0:2:3.01:0,3,43	0/0:2,0:2:6.01:0,6,67	0/0:10,0:8:7.23:0,7,53	0/0:18,0:10:4.14:0,4,33	0/0:3,0:3:2.99:0,3,24	0/0:2,0:2:5.99:0,6,49	./.	1/1:3,27:31:84.08:1253,84,0	0/0:1,0:1:3:0,3,25	0/0:3,0:3:3:0,3,28	./.	0/0:2,0:2:3:0,3,25	0/0:1,0:1:3:0,3,25	0/0:2,0:2:5.99:0,6,49	0/0:1,0:1:3:0,3,25	0/0:3,0:3:8.95:0,9,69	0/0:11,0:11:17.90:0,18,236	0/0:8,0:8:24.08:0,24,338	0/0:5,0:5:11.98:0,12,115	0/0:3,0:3:9.03:0,9,129	0/0:3,0:3:9.03:0,9,127	0/0:1,0:1:3:0,3,25	./.	0/0:1,0:1:1.55:0,2,4	0/0:3,0:3:8.99:0,9,76	1/1:1,9:10:11.13:444,11,0	1/1:0,13:13:23.85:434,24,0	1/1:2,4:6:12.04:219,12,0
chr10	23183955	.	AT	A	3630.77	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=9.712;DP=523;FS=0.442;HRun=1;HaplotypeScore=51.8965;InbreedingCoeff=0.9963;MQ=78.63;MQ0=0;MQRankSum=0.309;QD=39.90;ReadPosRankSum=-3.006;VQSLOD=2.8988;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,105,1606	0/0:11,0:11:33.11:0,33,524	0/0:14,0:14:39.12:0,39,600	0/0:10,0:10:16.76:0,17,255	0/0:31,0:31:93.32:0,93,1485	0/0:22,0:22:66.23:0,66,1052	0/0:11,0:11:33.11:0,33,527	1/1:0,36:36:99:1384,105,0	0/0:16,0:16:45.15:0,45,719	0/0:19,0:19:57.18:0,57,873	0/0:13,0:13:39.12:0,39,599	0/0:18,0:18:54.18:0,54,863	0/0:20,0:20:60.19:0,60,934	0/0:20,0:20:60.20:0,60,953	0/0:17,0:17:51.15:0,51,769	0/0:18,0:18:54.18:0,54,863	0/0:15,0:15:42.14:0,42,671	0/0:12,0:12:33.11:0,33,508	0/0:18,0:18:54.18:0,54,828	0/0:32,0:32:96.31:0,96,1511	0/0:13,0:13:39.13:0,39,623	0/0:9,0:9:27.06:0,27,405	0/0:15,0:15:45.15:0,45,715	0/0:11,0:11:33.11:0,33,527	0/0:32,0:32:96.33:0,96,1534	1/1:0,24:24:72.23:989,72,0	1/1:0,11:11:33.11:461,33,0	1/1:0,20:20:57.19:797,57,0
chr10	23185223	.	G	GACATTTGACCTATTAGTATA	28679.26	PASS	AB=0.968;AC=17;AF=0.304;AN=56;BaseQRankSum=6.085;DP=633;FS=0.985;HRun=0;HaplotypeScore=382.4309;InbreedingCoeff=-0.1842;MQ=71.13;MQ0=0;MQRankSum=-13.799;QD=78.15;ReadPosRankSum=-1.947;VQSLOD=2.8777;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:58.42:0,58,2552	0/1:8,3:11:1.50:1457,0,1	0/0:10,0:10:29.41:0,29,557	0/0:14,0:14:28.35:0,28,1091	0/0:38,0:38:41.36:0,41,4052	0/0:27,0:27:57.24:0,57,2838	0/1:9,0:9:22.91:23,0,775	0/1:49,0:49:99:4336,0,190	0/0:16,0:16:23.21:0,23,1926	0/1:29,0:29:24.56:25,0,2734	0/0:15,0:15:28.15:0,28,1563	0/1:26,0:26:26.83:27,0,2384	0/1:25,0:25:4.76:5,0,2494	0/0:23,0:23:66.17:0,66,2348	0/0:22,0:22:41.26:0,41,2288	0/0:27,0:27:81.27:0,81,3368	0/1:14,0:14:43.79:1277,0,44	0/1:11,0:11:28.52:724,0,29	0/1:27,2:29:85.56:3480,0,86	0/1:35,4:39:51.89:5949,0,52	0/1:11,0:11:82.18:341,0,82	0/0:25,0:25:4.23:0,4,2502	0/1:26,0:26:23.74:24,0,2270	0/1:13,0:13:8.93:9,0,1054	0/0:29,0:27:84.74:0,85,3307	0/1:26,1:27:91.46:3828,0,91	0/1:40,3:43:4.71:6934,0,5	1/1:5,0:5:14.98:241,15,0
chr10	23185992	.	G	GT	7660.88	PASS	AB=0.775;AC=41;AF=0.732;AN=56;BaseQRankSum=-2.807;DP=714;FS=19.040;HRun=13;HaplotypeScore=120.1704;InbreedingCoeff=0.4241;MQ=72.64;MQ0=4;MQRankSum=1.710;QD=12.70;ReadPosRankSum=1.207;VQSLOD=3.2122;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,17:27:15.52:263,16,0	1/1:3,7:10:18.02:167,18,0	0/1:29,1:17:2.73:3,0,12	0/1:24,0:15:1.76:2,0,2	1/1:5,25:31:64.22:585,64,0	0/1:9,16:27:5.17:349,0,5	0/1:6,4:11:47.01:75,0,47	0/0:27,1:31:28.67:0,29,315	1/1:5,17:23:24.21:338,24,0	1/1:9,11:25:44.38:355,44,0	1/1:5,20:26:33.14:408,33,0	0/1:7,12:19:8.13:218,0,8	1/1:5,19:29:51.68:486,52,0	1/1:6,26:34:23.91:525,24,0	1/1:7,23:33:43.37:536,43,0	1/1:10,21:32:12.56:374,13,0	1/1:7,28:35:19.17:589,19,0	1/1:4,8:13:0.33:133,0,0	0/1:17,3:21:58.71:59,0,69	1/1:9,27:38:36.27:528,36,0	1/1:3,13:17:23.09:245,23,0	1/1:6,14:20:33.83:291,34,0	1/1:9,26:37:51.01:603,51,0	1/1:3,19:23:30.32:412,30,0	0/1:9,3:17:65.82:119,0,66	0/0:32,0:32:8.49:0,8,338	0/0:34,0:36:78.13:0,78,515	0/0:12,0:12:20.79:0,21,144
chr10	23186425	.	ATT	A	7830.74	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-5.437;DP=535;FS=3.017;HRun=10;HaplotypeScore=133.3672;InbreedingCoeff=0.9733;MQ=61.38;MQ0=2;MQRankSum=-3.535;QD=26.46;ReadPosRankSum=1.393;VQSLOD=3.9915;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:77.51:0,78,1086	0/0:1,0:10:25.30:0,25,91	0/0:13,0:13:30.09:0,30,411	0/0:4,0:4:8.94:0,9,103	1/1:7,20:26:54.04:570,54,0	1/1:4,19:23:66.10:705,66,0	1/1:8,9:17:36.07:390,36,0	0/0:8,1:31:29.52:0,30,174	1/1:2,16:18:51.10:554,51,0	1/1:4,13:17:39.07:429,39,0	1/1:6,15:21:45.10:501,45,0	1/1:2,12:14:36.09:401,36,0	1/1:3,17:19:54.15:601,54,0	1/1:4,17:20:57.12:617,57,0	1/1:6,10:16:39.07:425,39,0	1/1:5,15:19:48.12:535,48,0	0/0:8,0:18:27.94:0,28,107	0/0:5,0:8:7.03:0,7,23	0/0:11,0:32:64:0,64,280	0/0:4,0:27:55.15:0,55,192	0/0:4,0:9:17.97:0,18,74	1/1:6,15:20:51.08:545,51,0	1/1:4,19:22:60.12:655,60,0	1/1:4,12:16:24.05:267,24,0	1/1:5,17:22:57.15:635,57,0	0/0:3,0:20:44.92:0,45,154	0/0:5,0:34:77.48:0,77,279	0/0:0,0:5:11.54:0,12,39
chr10	23186450	.	A	AT	19420.98	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=0.959;DP=588;FS=4.798;HRun=3;HaplotypeScore=118.7635;InbreedingCoeff=0.9216;MQ=69.93;MQ0=0;MQRankSum=-9.020;QD=34.99;ReadPosRankSum=5.826;VQSLOD=3.9727;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,30:30:78.26:1092,78,0	1/1:0,15:14:39.13:545,39,0	0/0:24,0:24:66.19:0,66,768	0/0:8,0:9:9.11:0,9,232	1/1:1,27:28:72.20:984,72,0	1/1:2,21:23:57.16:775,57,0	1/1:0,18:18:48.16:671,48,0	1/1:7,24:31:72.23:989,72,0	1/1:4,17:21:54.18:755,54,0	1/1:1,24:26:69.23:950,69,0	1/1:0,18:18:51.08:669,51,0	1/1:2,19:21:48.08:612,48,0	1/1:1,21:22:57.18:782,57,0	1/1:1,22:23:60.17:818,60,0	1/1:0,21:21:57.19:796,57,0	1/1:2,20:22:57.15:776,57,0	1/1:3,10:13:30.06:397,30,0	1/1:1,3:4:9.03:126,9,0	1/1:4,18:22:54.18:754,54,0	1/1:3,30:33:90.26:1231,90,0	1/1:1,4:5:12.04:168,12,0	1/1:1,21:22:57.06:731,57,0	1/1:1,26:27:75.25:1048,75,0	1/1:4,14:18:33.02:417,33,0	1/1:1,22:23:54.18:755,54,0	1/1:3,20:23:63.20:865,63,0	1/1:1,39:40:99:1487,108,0	1/1:0,6:6:18.02:226,18,0
chr10	23186734	.	TG	T	6123.65	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=13.246;DP=610;FS=11.239;HRun=1;HaplotypeScore=73.4654;InbreedingCoeff=0.9863;MQ=87.43;MQ0=0;MQRankSum=1.404;QD=36.89;ReadPosRankSum=0.322;VQSLOD=4.3200;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:81.18:0,81,1173	1/1:0,16:16:39.13:545,39,0	0/0:19,0:19:47.09:0,47,714	0/0:28,2:30:49.91:0,50,842	0/0:29,0:29:84.24:0,84,1221	0/0:28,0:28:84.27:0,84,1261	0/0:17,0:17:51.14:0,51,736	1/1:0,23:23:69.21:931,69,0	0/0:27,0:27:81.28:0,81,1236	0/0:33,0:33:96.24:0,96,1403	0/0:28,0:28:81.23:0,81,1167	0/0:15,0:15:45.14:0,45,665	0/0:28,0:28:84.29:0,84,1282	0/0:20,0:20:60.20:0,60,918	0/0:28,0:28:84.22:0,84,1196	0/0:27,0:26:81.19:0,81,1188	1/1:0,13:13:27.09:377,27,0	1/1:0,4:4:9.03:126,9,0	1/1:0,20:20:60.16:786,60,0	1/1:0,25:25:75.21:1022,75,0	1/1:0,15:15:45.15:629,45,0	0/0:18,0:18:54.16:0,54,791	0/0:29,0:29:84.26:0,84,1256	0/0:19,0:19:57.16:0,57,826	0/0:21,0:21:63.20:0,63,929	1/1:1,23:24:25.56:829,26,0	1/1:0,18:18:51.17:713,51,0	1/1:0,8:8:12.04:168,12,0
chr10	23187500	.	GT	G	2175.76	PASS	AB=0.970;AC=28;AF=0.500;AN=56;BaseQRankSum=-4.027;DP=502;FS=2.806;HRun=2;HaplotypeScore=100.6354;InbreedingCoeff=0.6110;MQ=72.37;MQ0=1;MQRankSum=1.442;QD=6.55;ReadPosRankSum=-3.527;VQSLOD=-0.4023;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:44.97:0,45,590	0/0:8,0:8:21.03:0,21,203	0/1:18,1:15:23.52:24,0,163	0/0:19,0:16:18.89:0,19,136	1/1:32,2:34:9.10:212,9,0	1/1:28,0:28:2.21:162,2,0	0/1:16,0:16:2.73:98,0,3	0/0:26,0:24:59.84:0,60,606	1/1:21,1:22:4.88:168,5,0	1/1:14,0:14:16.50:141,17,0	1/1:22,1:23:10.61:182,11,0	1/1:12,0:12:7.80:122,8,0	0/1:17,0:17:6.02:88,0,6	1/1:27,2:29:2.10:202,2,0	1/1:14,1:15:22.43:144,22,0	1/1:22,0:22:40.36:219,40,0	0/0:12,0:12:20.94:0,21,204	0/0:7,0:7:14.94:0,15,127	0/0:15,0:15:23.16:0,23,280	0/0:15,0:15:35.21:0,35,390	0/0:7,0:7:11.99:0,12,105	1/1:15,2:17:6.72:121,7,0	1/1:33,1:34:19.82:311,20,0	0/1:12,1:13:6.57:48,0,7	1/1:14,3:17:7.34:134,7,0	0/0:17,0:17:38.29:0,38,388	0/0:24,0:24:17.87:0,18,146	0/0:5,0:5:3.01:0,3,31
chr10	23187501	.	T	TA	314.84	PASS	AB=0.904;AC=6;AF=0.107;AN=56;BaseQRankSum=0.124;DP=512;FS=9.223;HRun=0;HaplotypeScore=113.3606;InbreedingCoeff=0.2598;MQ=71.32;MQ0=1;MQRankSum=-1.168;QD=3.54;ReadPosRankSum=-1.707;VQSLOD=2.4122;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:45.15:0,45,628	0/0:8,0:8:21.03:0,21,227	0/1:19,0:15:10.81:11,0,168	0/0:18,0:15:25.20:0,25,212	0/0:34,3:37:12.71:0,13,207	0/0:29,0:29:60.35:0,60,305	0/0:15,0:15:30.42:0,30,159	0/0:23,0:21:59.81:0,60,676	0/0:22,0:22:0.78:0,1,174	0/0:18,0:18:21.13:0,21,95	0/0:22,0:23:19.79:0,20,168	0/1:13,0:13:5.18:5,0,66	0/1:17,0:17:4.65:5,0,132	0/0:29,0:29:35.40:0,35,235	0/1:6,10:16:4.23:100,0,4	1/1:5,17:24:26:312,26,0	0/0:12,0:12:20.98:0,21,211	0/0:9,0:9:14.98:0,15,153	0/0:15,0:15:11.58:0,12,333	0/0:17,0:17:3.09:0,3,404	0/0:8,0:8:12.04:0,12,156	0/0:18,1:19:10.19:0,10,140	0/0:34,0:34:61.43:0,61,285	0/0:12,0:12:30.88:0,31,161	0/0:17,0:17:27.01:0,27,124	0/0:14,0:14:41.84:0,42,482	0/0:24,0:24:18.03:0,18,223	0/0:5,0:5:3:0,3,28
chr10	23188371	.	ATATCTATC	A	4245.87	PASS	AB=1.000;AC=39;AF=0.780;AN=50;BaseQRankSum=-0.935;DP=552;FS=0.000;HRun=0;HaplotypeScore=239.5750;InbreedingCoeff=0.5475;MQ=57.05;MQ0=0;MQRankSum=-4.589;QD=10.31;ReadPosRankSum=-1.331;VQSLOD=3.4267;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:20:20.99:0,21,243	1/1:6,3:9:5.95:75,6,0	./.	./.	0/0:13,6:20:2.66:0,3,24	1/1:9,18:27:36.12:618,36,0	0/0:14,2:16:0.94:0,1,1	1/1:40,0:39:2.49:5,2,0	1/1:6,11:17:11.98:201,12,0	1/1:16,7:23:24.07:549,24,0	1/1:5,8:13:2.72:52,3,0	1/1:15,6:21:14.99:300,15,0	1/1:14,13:27:30.10:619,30,0	0/0:14,10:24:1.41:0,1,2	1/1:12,14:26:11.85:215,12,0	0/0:16,0:29:36.91:0,37,341	1/1:9,4:13:6.02:150,6,0	./.	1/1:15,2:17:6.02:150,6,0	1/1:15,11:26:5.50:105,5,0	0/1:17,0:17:0:0,0,0	1/1:11,2:12:2.89:74,3,0	1/1:17,7:24:2.46:34,2,0	1/1:12,1:13:3.01:75,3,0	1/1:13,14:28:18:255,18,0	1/1:13,0:23:21.07:391,21,0	1/1:16,0:26:20.10:342,20,0	1/1:9,0:9:8.34:37,8,0
chr10	23188425	.	T	TACAC	3908.12	PASS	AB=0.865;AC=30;AF=0.536;AN=56;BaseQRankSum=2.471;DP=601;FS=16.638;HRun=0;HaplotypeScore=279.2104;InbreedingCoeff=0.6769;MQ=42.37;MQ0=9;MQRankSum=-2.075;QD=11.33;ReadPosRankSum=-4.495;VQSLOD=1.3232;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:23:21.02:66,0,21	0/0:10,0:10:10.45:0,10,95	0/0:32,0:9:5.89:0,6,65	0/0:36,0:18:7.80:0,8,62	0/1:22,12:35:10.13:32,0,10	1/1:21,6:28:24.03:420,24,0	1/1:9,3:14:8.69:182,9,0	0/0:39,0:39:12.45:0,12,284	1/1:13,3:16:2.99:25,3,0	1/1:20,2:22:42.37:683,42,0	1/1:15,9:25:8.94:167,9,0	1/1:10,5:18:21.01:374,21,0	1/1:22,5:28:41.67:672,42,0	1/1:15,7:25:14.09:226,14,0	1/1:22,2:24:3.26:9,3,0	1/1:18,3:22:17.63:291,18,0	0/0:14,0:14:12.30:0,12,77	0/0:3,0:3:8.30:0,8,43	0/0:18,0:17:26.77:0,27,243	0/0:28,0:28:38.53:0,39,323	0/0:22,0:19:23.31:0,23,141	1/1:9,3:12:15.04:238,15,0	1/1:10,7:17:8.56:180,9,0	1/1:3,3:11:3.01:52,3,0	1/1:18,6:24:14.68:291,15,0	0/0:27,0:28:58.81:0,59,549	0/0:20,0:21:28.70:0,29,319	0/0:4,0:5:0.30:0,0,107
chr10	23188443	.	CACAG	C	1024.42	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=-6.763;DP=632;FS=2.081;HRun=0;HaplotypeScore=269.3954;InbreedingCoeff=-0.2992;MQ=44.03;MQ0=17;MQRankSum=3.455;QD=2.76;ReadPosRankSum=-6.504;VQSLOD=1.1611;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:20,5:25:23.65:271,24,0	0/0:11,0:11:13.38:0,13,272	0/0:26,0:8:10.71:0,11,126	0/1:37,0:15:29.50:29,0,180	0/0:38,0:38:34.35:0,34,270	0/1:22,0:22:6.25:6,0,215	0/1:15,0:15:40.69:82,0,41	0/1:41,0:41:99:206,0,355	0/1:14,0:14:12.52:13,0,54	0/1:27,0:27:99:136,0,210	0/0:28,0:28:24.12:0,24,165	0/1:18,0:18:7.36:7,0,278	0/1:24,0:24:57.13:57,0,253	0/0:21,0:21:24.99:0,25,171	0/1:23,0:22:55.10:55,0,88	0/0:21,0:21:1.05:0,1,153	0/0:10,0:10:1.29:0,1,217	0/0:4,0:4:9.03:0,9,139	0/1:28,0:25:32.82:33,0,468	0/0:31,0:31:23.58:0,24,687	0/0:33,0:27:26.91:0,27,463	0/1:16,0:16:40.41:40,0,106	0/1:21,0:21:57.53:136,0,58	0/1:15,0:15:30.67:31,0,52	0/1:26,0:25:32.25:32,0,162	0/0:30,0:30:34.56:0,35,556	0/1:19,0:19:49.44:49,0,329	0/0:7,0:7:15.18:0,15,137
chr10	23188447	.	G	GAC	8605.19	PASS	AB=0.793;AC=46;AF=0.821;AN=56;BaseQRankSum=1.595;DP=629;FS=5.558;HRun=0;HaplotypeScore=228.0454;InbreedingCoeff=0.2898;MQ=45.07;MQ0=16;MQRankSum=-1.866;QD=15.07;ReadPosRankSum=0.311;VQSLOD=3.9044;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:24:4.74:11,0,5	1/1:2,9:11:15.51:250,16,0	0/0:25,0:9:17.73:0,18,219	0/0:33,0:13:18.49:0,18,208	1/1:7,29:37:22.47:187,22,0	1/1:12,8:20:34.18:468,34,0	1/1:12,4:16:22.56:319,23,0	1/1:42,0:42:50.89:922,51,0	1/1:11,4:15:14.06:173,14,0	1/1:8,20:30:57.77:823,58,0	1/1:9,20:29:18.24:127,18,0	0/1:12,6:18:20.43:226,0,20	1/1:16,7:23:39.28:556,39,0	1/1:10,11:21:21.17:213,21,0	1/1:16,5:21:31.96:365,32,0	1/1:7,12:19:15.05:238,15,0	1/1:7,3:10:10.58:141,11,0	1/1:0,3:4:6.49:101,6,0	1/1:15,13:28:16.27:562,16,0	0/1:12,20:33:4.44:506,0,4	0/1:7,27:28:10.22:371,0,10	0/1:13,3:16:11.39:311,0,11	1/1:13,8:21:29.16:329,29,0	1/1:12,3:15:17.55:236,18,0	1/1:16,9:24:30.19:390,30,0	1/1:28,0:28:18.71:391,19,0	1/1:18,1:19:29.59:255,30,0	0/1:8,0:8:18.48:134,0,18
chr10	23188614	.	C	CAGAT	4014.01	PASS	AB=0.841;AC=41;AF=0.854;AN=48;BaseQRankSum=-0.806;DP=584;FS=1.196;HRun=0;HaplotypeScore=163.1488;InbreedingCoeff=0.2000;MQ=63.61;MQ0=4;MQRankSum=0.759;QD=7.96;ReadPosRankSum=0.035;VQSLOD=3.0761;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:31,0:31:14.48:169,14,0	1/1:13,0:12:6.01:95,6,0	./.	./.	0/1:13,7:24:37.40:65,0,37	1/1:30,1:31:18.04:289,18,0	1/1:18,0:18:15.51:227,16,0	1/1:38,0:37:14.95:116,15,0	./.	1/1:22,1:22:42.02:750,42,0	1/1:6,15:20:6.02:142,6,0	./.	1/1:17,0:17:21.01:277,21,0	1/1:22,0:22:14.98:239,15,0	1/1:20,0:20:9:99,9,0	0/1:23,1:22:2.49:109,0,2	1/1:16,0:16:5.36:46,5,0	0/1:10,0:10:7.35:47,0,7	1/1:27,0:25:7.76:58,8,0	1/1:25,0:24:12.01:190,12,0	1/1:13,0:13:0.47:1,0,0	0/0:18,0:17:18.03:0,18,231	0/1:9,15:23:0:0,0,0	0/1:17,1:18:20.16:306,0,20	1/1:15,20:33:3.01:71,3,0	1/1:26,0:25:24.84:311,25,0	1/1:11,0:11:2.94:18,3,0	1/1:15,0:15:30.37:390,30,0
chr10	23188624	.	GATAGATAGATAGATAGATAGATAGATAGATAC	G	2050.87	PASS	AB=1.000;AC=15;AF=0.288;AN=52;BaseQRankSum=0.347;DP=607;FS=7.717;HRun=0;HaplotypeScore=417.0892;InbreedingCoeff=0.2825;MQ=58.37;MQ0=8;MQRankSum=-3.672;QD=7.65;ReadPosRankSum=-0.905;VQSLOD=0.7203;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:28.43:0,28,1793	0/0:14,0:13:21.33:0,21,1544	./.	./.	0/0:26,0:26:7.85:0,8,1057	0/1:36,0:33:30.88:31,0,847	0/1:19,0:19:21.48:61,0,21	1/1:27,12:37:35.84:320,36,0	0/0:18,0:17:14.04:0,14,1492	0/0:31,0:30:44.94:0,45,4766	0/0:27,0:24:8.33:0,8,845	0/0:16,0:16:6.02:0,6,560	0/1:21,0:21:40.74:41,0,2097	0/1:27,0:27:23.29:23,0,2128	0/0:18,0:18:20.54:0,21,1745	0/0:24,0:22:34.94:0,35,1951	0/0:16,0:16:3.10:0,3,1572	0/0:14,0:14:34:0,34,2598	0/0:27,0:23:31.33:0,31,1835	0/0:30,0:29:28.12:0,28,4120	0/0:11,0:11:18.04:0,18,697	0/0:17,0:16:18.06:0,18,1207	0/1:25,0:22:10.98:11,0,355	0/1:16,0:16:71.82:72,0,765	0/1:33,0:31:0.28:0,0,252	1/1:7,20:26:40.23:893,40,0	1/1:10,0:10:2.94:18,3,0	1/1:15,0:15:32.87:744,33,0
chr10	23188652	.	GATAC	G	4843.27	PASS	AB=1.000;AC=37;AF=0.712;AN=52;BaseQRankSum=1.705;DP=609;FS=2.186;HRun=0;HaplotypeScore=185.7498;InbreedingCoeff=-0.1335;MQ=51.86;MQ0=12;MQRankSum=2.210;QD=8.57;ReadPosRankSum=-6.513;VQSLOD=1.4837;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:30:13.09:284,13,0	0/1:15,0:14:75.55:76,0,109	./.	./.	0/1:23,0:23:54.55:104,0,55	0/1:26,0:23:72.68:82,0,73	1/1:20,0:20:21.56:232,22,0	1/1:21,0:18:35.73:259,36,0	1/1:21,0:19:28.69:228,29,0	0/1:33,0:32:99:259,0,347	0/1:33,0:30:95.82:102,0,96	1/1:15,0:15:11.98:99,12,0	1/1:24,0:24:20.75:394,21,0	1/1:27,0:27:49.01:406,49,0	1/1:21,0:21:41.75:307,42,0	0/1:28,0:26:28.18:275,0,28	1/1:22,0:22:2.76:281,3,0	0/0:17,0:17:2.10:0,2,309	0/1:25,0:19:99:104,0,310	0/1:30,0:29:99:162,0,370	0/1:12,0:12:49.10:101,0,49	0/0:10,8:17:18.02:0,18,284	1/1:29,0:27:6.14:84,6,0	0/1:13,0:13:58.88:105,0,59	0/1:36,0:34:19.60:197,0,20	1/1:20,0:20:44.12:326,44,0	1/1:0,22:22:2.94:18,3,0	1/1:19,0:19:47.73:362,48,0
chr10	23188656	.	C	CATAG	5755.28	PASS	AB=1.000;AC=40;AF=0.800;AN=50;BaseQRankSum=-1.391;DP=599;FS=2.879;HRun=0;HaplotypeScore=182.8990;InbreedingCoeff=0.2951;MQ=51.91;MQ0=11;MQRankSum=2.933;QD=11.18;ReadPosRankSum=-1.019;VQSLOD=4.4796;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:29:9.87:99,10,0	0/1:15,0:14:33.34:33,0,79	./.	./.	1/1:25,0:25:20.75:291,21,0	1/1:9,11:22:5.99:93,6,0	1/1:21,0:21:18.77:234,19,0	1/1:15,0:13:12.39:89,12,0	1/1:21,0:19:32.96:521,33,0	1/1:14,19:33:4.29:810,4,0	1/1:34,0:31:11.89:140,12,0	1/1:14,0:14:12.02:174,12,0	1/1:25,0:25:33.81:741,34,0	1/1:28,0:28:53.16:853,53,0	0/1:21,0:21:9.72:81,0,10	1/1:28,0:26:3.84:110,4,0	1/1:22,0:22:40.98:559,41,0	0/0:18,0:18:29.68:0,30,366	0/0:25,0:20:1.58:0,2,351	0/1:30,0:29:35.89:36,0,383	0/0:11,0:11:7.64:0,8,134	0/1:17,0:16:16.97:17,0,60	1/1:29,0:27:18.05:255,18,0	1/1:11,0:11:5.99:89,6,0	1/1:32,0:30:33.05:472,33,0	1/1:21,0:21:6.24:52,6,0	./.	1/1:18,0:18:2.66:6,3,0
chr10	23189652	.	T	TC	4129.70	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=1.017;DP=554;FS=7.650;HRun=2;HaplotypeScore=55.1172;InbreedingCoeff=0.9981;MQ=89.15;MQ0=0;MQRankSum=-3.902;QD=39.33;ReadPosRankSum=-1.226;VQSLOD=3.3936;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:81.25:0,81,1003	0/0:10,0:10:30.08:0,30,359	0/0:22,0:22:56.37:0,56,654	0/0:21,0:21:57.06:0,57,662	0/0:33,0:33:99:0,99,1215	0/0:11,0:11:27.08:0,27,335	0/0:18,0:18:51.16:0,51,632	1/1:2,27:29:81.26:1148,81,0	0/0:16,0:16:48.15:0,48,595	0/0:21,0:21:63.20:0,63,781	0/0:19,0:19:57.18:0,57,707	0/0:12,0:12:36.11:0,36,446	0/0:22,0:22:63.20:0,63,781	0/0:13,0:13:39.12:0,39,483	0/0:22,0:22:66.21:0,66,818	0/0:22,0:22:60.19:0,60,744	0/0:18,0:18:51.13:0,51,616	0/0:11,0:11:33.10:0,33,408	0/0:15,0:15:45.14:0,45,558	0/0:29,0:29:87.27:0,87,1079	0/0:18,0:18:48.15:0,48,595	0/0:10,0:10:27.08:0,27,334	0/0:16,0:16:45.14:0,45,558	0/0:9,0:9:27.08:0,27,335	0/0:33,0:33:99:0,99,1228	1/1:1,19:20:23:784,23,0	1/1:1,33:34:96.32:1383,96,0	1/1:1,21:22:57.19:816,57,0
chr10	23189743	.	TA	T	2041.52	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=11.075;DP=533;FS=13.193;HRun=8;HaplotypeScore=52.4663;InbreedingCoeff=0.9876;MQ=68.05;MQ0=0;MQRankSum=-0.035;QD=23.20;ReadPosRankSum=-1.940;VQSLOD=2.3852;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,99,1170	0/0:10,0:10:27.08:0,27,326	0/0:14,0:12:21.06:0,21,250	0/0:6,0:5:11.98:0,12,125	0/0:30,0:30:72.18:0,72,835	0/0:16,0:16:48.13:0,48,566	0/0:18,1:19:25.12:0,25,529	1/1:5,26:31:78.56:739,79,0	0/0:17,0:17:48.13:0,48,560	0/0:25,0:25:72.22:0,72,869	0/0:16,1:17:22.19:0,22,545	0/0:14,0:14:39.12:0,39,471	0/0:23,0:23:63.19:0,63,759	0/0:14,0:14:39.12:0,39,470	0/0:21,0:21:54.17:0,54,652	0/0:24,0:24:66.20:0,66,797	0/0:18,0:18:51.13:0,51,601	0/0:24,0:24:66.11:0,66,750	0/0:18,0:18:48.14:0,48,571	0/0:25,0:25:63.19:0,63,761	0/0:12,0:12:30.08:0,30,351	0/0:9,0:9:24.07:0,24,289	0/0:20,0:20:54.16:0,54,642	0/0:11,0:11:27.08:0,27,326	0/0:22,0:22:51.14:0,51,596	1/1:3,21:24:60.06:572,60,0	1/1:4,16:20:54.07:516,54,0	1/1:0,13:13:39.06:376,39,0
chr10	23190679	.	CACAA	C	7776.74	PASS	AB=0.995;AC=27;AF=0.482;AN=56;BaseQRankSum=5.873;DP=926;FS=2.645;HRun=0;HaplotypeScore=290.4041;InbreedingCoeff=-0.5958;MQ=51.91;MQ0=10;MQRankSum=3.588;QD=9.54;ReadPosRankSum=13.150;VQSLOD=1.5114;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,148,2781	1/1:14,0:14:20.45:211,20,0	0/1:38,0:16:42.53:43,0,342	0/1:33,0:17:13.69:14,0,255	0/1:32,0:31:69.12:297,0,69	0/1:25,0:25:55.43:267,0,55	0/1:35,0:35:73.96:74,0,183	0/0:28,0:27:38.75:0,39,597	0/1:35,1:36:99:267,0,265	0/1:45,2:47:78.01:783,0,78	0/1:26,1:27:98.71:165,0,99	0/1:29,0:29:99:226,0,242	1/1:33,1:34:25.93:667,26,0	0/1:38,0:38:99:315,0,190	0/1:41,0:41:99:279,0,100	0/1:32,0:32:93.28:385,0,93	0/1:37,0:36:1.21:592,0,1	0/1:24,0:24:12.01:375,0,12	0/1:25,0:22:11.27:237,0,11	0/1:25,0:25:70.96:262,0,71	0/1:79,0:76:41.44:1146,0,41	0/1:36,0:36:94.11:94,0,273	0/1:29,0:29:99:265,0,178	0/1:47,0:47:44.36:645,0,44	0/1:26,0:26:65.97:122,0,66	0/0:33,0:32:11.85:0,12,859	0/1:16,0:16:38.62:39,0,407	0/1:10,0:9:7.89:8,0,238
chr10	23190683	.	AACAC	A	19458.39	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=0.967;DP=954;FS=34.210;HRun=0;HaplotypeScore=263.5536;InbreedingCoeff=0.9845;MQ=51.50;MQ0=12;MQRankSum=5.086;QD=26.62;ReadPosRankSum=3.198;VQSLOD=3.0968;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,126,2625	1/1:0,13:13:23.75:414,24,0	0/0:41,0:17:27.08:0,27,486	0/0:36,0:17:20.78:0,21,265	1/1:2,29:30:41.78:725,42,0	1/1:4,22:26:39.09:631,39,0	1/1:7,29:36:15.52:260,16,0	0/0:26,0:26:23.36:0,23,196	1/1:14,24:38:50.73:775,51,0	1/1:12,36:48:97.96:1653,98,0	1/1:5,21:26:22.04:412,22,0	1/1:13,15:28:32.67:563,33,0	1/1:16,17:33:90.01:1391,90,0	1/1:25,17:42:68.45:1022,68,0	1/1:6,38:44:44.65:741,45,0	1/1:19,14:33:66.09:1092,66,0	1/1:17,19:35:90.27:1459,90,0	1/1:13,12:25:63.13:970,63,0	1/1:21,7:24:54.06:768,54,0	1/1:1,26:27:40.68:662,41,0	1/1:41,39:76:99:2788,177,0	1/1:6,27:33:20.07:362,20,0	1/1:9,20:29:38.80:673,39,0	1/1:23,27:50:99:1784,114,0	1/1:3,22:25:18.06:311,18,0	0/0:22,1:33:13.24:0,13,720	0/0:9,0:17:29.40:0,29,351	0/0:4,0:9:14.08:0,14,218
chr10	23190724	.	ACG	A	1703.76	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=5.180;DP=1077;FS=12.704;HRun=0;HaplotypeScore=331.0697;InbreedingCoeff=0.9807;MQ=51.03;MQ0=33;MQRankSum=-9.732;QD=18.32;ReadPosRankSum=-2.372;VQSLOD=1.9539;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,126,2294	0/0:15,0:15:33.07:0,33,368	0/0:60,0:11:29.97:0,30,420	0/0:44,0:14:20.73:0,21,358	0/0:35,0:35:50.78:0,51,582	0/0:29,0:29:51.01:0,51,565	0/0:40,0:40:50.52:0,51,534	1/1:19,25:34:63.01:708,63,0	0/0:40,0:40:60.10:0,60,675	0/0:53,0:51:99:0,125,1290	0/0:19,1:20:23.91:0,24,277	0/0:44,0:44:86.58:0,87,936	0/0:43,0:43:99:0,102,1176	0/0:52,0:52:99:0,102,1112	0/0:49,0:49:74.93:0,75,828	0/0:37,0:36:84.20:0,84,905	0/0:38,0:38:72.52:0,73,959	0/0:23,0:23:37.68:0,38,485	0/0:32,0:22:54.09:0,54,566	0/0:33,0:33:29.30:0,29,552	0/0:102,0:99:99:0,173,1932	0/0:28,0:28:35.76:0,36,393	0/0:30,0:30:57.13:0,57,619	0/0:58,1:60:89.79:0,90,989	0/0:24,0:24:39.10:0,39,431	1/1:13,20:31:56.97:741,57,0	1/1:2,9:11:24.07:296,24,0	1/1:2,3:5:9.03:114,9,0
chr10	23190756	.	TCA	T	691.36	PASS	AB=0.884;AC=7;AF=0.125;AN=56;BaseQRankSum=7.144;DP=1093;FS=8.520;HRun=0;HaplotypeScore=304.0257;InbreedingCoeff=0.6693;MQ=50.55;MQ0=43;MQRankSum=-10.489;QD=7.20;ReadPosRankSum=-3.037;VQSLOD=1.8078;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,135,2183	0/0:13,0:13:18.06:0,18,300	0/0:33,0:2:3.01:0,3,48	0/0:26,0:3:3.01:0,3,41	0/0:32,0:32:51.17:0,51,868	0/0:24,0:23:36.11:0,36,612	0/0:44,0:43:93.21:0,93,1466	1/1:29,10:29:25.25:318,25,0	0/0:42,0:41:84.22:0,84,1410	0/0:55,0:53:99:0,144,2391	0/0:21,0:21:27.09:0,27,446	0/0:51,0:51:99:0,124,2082	0/0:46,0:45:99:0,108,1660	0/0:66,0:64:99:0,153,2531	0/0:51,0:51:75.26:0,75,1263	0/0:39,0:38:87.08:0,87,1396	0/0:38,0:38:64.94:0,65,1270	0/0:21,0:21:31.97:0,32,836	0/0:37,0:25:68.59:0,69,1078	0/0:35,0:33:69.19:0,69,1056	0/0:124,0:119:99:0,211,3475	0/0:32,0:31:39.11:0,39,635	0/0:26,0:26:45.15:0,45,762	0/0:57,0:56:87.14:0,87,1456	0/0:32,0:30:30.07:0,30,484	0/1:33,5:32:40.99:342,0,41	1/1:13,3:15:11.29:144,11,0	1/1:1,2:2:2.97:20,3,0
chr10	23190764	.	A	ACT	1105.74	PASS	AB=0.740;AC=7;AF=0.125;AN=56;BaseQRankSum=7.724;DP=1087;FS=11.591;HRun=0;HaplotypeScore=307.5485;InbreedingCoeff=0.6390;MQ=50.16;MQ0=45;MQRankSum=-10.212;QD=12.71;ReadPosRankSum=-3.756;VQSLOD=1.9199;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,141,2039	0/0:14,0:14:27.04:0,27,343	0/0:24,0:1:3.01:0,3,45	0/0:25,0:2:3.01:0,3,44	0/0:26,0:26:51.17:0,51,780	0/0:27,0:26:39.06:0,39,568	0/0:45,0:44:96.22:0,96,1374	1/1:30,0:23:9.24:223,9,0	0/0:45,0:44:87.25:0,87,1304	0/0:58,0:56:99:0,153,2243	0/0:21,0:21:27.09:0,27,413	0/0:51,0:51:99:0,126,1902	0/0:46,0:45:99:0,111,1577	0/0:63,0:61:99:0,156,2295	0/0:51,0:51:75.25:0,75,1143	0/0:38,0:37:87.29:0,87,1299	0/0:40,0:40:89.16:0,89,1294	0/0:24,0:24:45.51:0,46,794	0/0:40,0:28:81.09:0,81,1097	0/0:37,0:36:81.08:0,81,1056	0/0:123,0:119:99:0,237,3345	0/0:38,0:36:42.11:0,42,598	0/0:25,0:25:45.15:0,45,687	0/0:54,0:53:88.73:0,89,1326	0/0:30,0:28:30.09:0,30,438	0/1:21,11:31:91.44:739,0,91	1/1:9,6:14:8.46:251,8,0	1/1:3,0:2:2.97:20,3,0
chr10	23190766	.	ACT	A	495.60	PASS	AB=0.947;AC=5;AF=0.089;AN=56;BaseQRankSum=8.496;DP=1072;FS=12.011;HRun=0;HaplotypeScore=308.3474;InbreedingCoeff=0.6517;MQ=50.72;MQ0=44;MQRankSum=-8.373;QD=6.27;ReadPosRankSum=-6.796;VQSLOD=1.0971;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,139,2407	0/0:13,0:13:29.87:0,30,341	0/0:22,0:1:2.99:0,3,23	0/0:25,0:2:2.44:0,2,20	0/0:25,0:25:51.11:0,51,976	0/0:25,0:24:41.99:0,42,725	0/0:42,1:42:95.95:0,96,1581	1/1:28,0:19:42.57:268,43,0	0/0:43,0:42:87.17:0,87,1616	0/0:57,0:55:99:0,127,2651	0/0:20,0:20:26.96:0,27,500	0/0:51,0:51:99:0,104,2273	0/0:46,0:45:99:0,108,1708	0/0:64,0:62:99:0,148,2725	0/0:51,0:51:75.23:0,75,1375	0/0:41,0:40:84.19:0,84,1585	0/0:40,0:40:83.30:0,83,1547	0/0:24,1:25:17.95:0,18,938	0/0:38,0:28:77.30:0,77,1144	0/0:37,0:36:80.78:0,81,1284	0/0:121,1:116:99:0,225,3925	0/0:38,0:36:38.95:0,39,697	0/0:25,0:25:45.14:0,45,797	0/0:55,0:54:87.23:0,87,1527	0/0:31,0:29:27.07:0,27,519	0/1:33,2:30:31.45:205,0,31	1/1:14,0:14:19.60:149,20,0	0/0:3,0:2:0:0,0,0
chr10	23190809	.	AACACACACACTC	A	9470.56	PASS	AB=1.000;AC=34;AF=0.607;AN=56;BaseQRankSum=5.920;DP=977;FS=3.883;HRun=0;HaplotypeScore=404.8582;InbreedingCoeff=0.7261;MQ=45.45;MQ0=18;MQRankSum=-6.260;QD=16.56;ReadPosRankSum=-6.159;VQSLOD=1.4715;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:84.01:0,84,3390	0/0:11,0:11:27.09:0,27,1106	0/0:36,0:5:14.80:0,15,183	0/0:49,0:8:8.42:0,8,143	1/1:10,11:22:29.20:189,29,0	1/1:5,15:20:29.61:244,30,0	1/1:26,5:31:59.83:599,60,0	0/0:46,0:39:28.24:0,28,614	1/1:25,14:39:68.46:1059,68,0	1/1:34,11:40:65.18:1528,65,0	1/1:6,7:13:23.60:217,24,0	1/1:34,11:45:78.69:1032,79,0	1/1:19,14:33:73.89:1410,74,0	1/1:39,10:48:64.75:735,65,0	1/1:12,36:48:36.67:230,37,0	1/1:17,10:26:16.78:638,17,0	0/0:38,0:38:75.56:0,76,2821	0/1:29,0:28:5.74:6,0,2378	0/0:34,0:26:45.13:0,45,1437	0/0:25,0:25:57.20:0,57,2337	0/0:123,0:120:99:0,195,6338	1/1:19,13:31:50.62:367,51,0	1/1:8,8:16:31.64:396,32,0	1/1:37,7:44:45.04:670,45,0	1/1:8,16:24:8.62:59,9,0	0/1:34,0:33:60.03:60,0,545	0/1:17,0:16:31.34:31,0,83	0/1:4,0:4:1.65:2,0,83
chr10	23190825	.	C	CACAA	4526.96	PASS	AB=0.964;AC=23;AF=0.411;AN=56;BaseQRankSum=8.232;DP=967;FS=7.158;HRun=0;HaplotypeScore=347.1998;InbreedingCoeff=-0.1702;MQ=44.01;MQ0=20;MQRankSum=-6.163;QD=6.88;ReadPosRankSum=-7.601;VQSLOD=1.0873;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,108,1783	0/0:12,0:12:33.11:0,33,609	0/0:30,0:7:17.79:0,18,187	0/1:50,0:9:5.16:5,0,129	1/1:23,0:23:5.64:122,6,0	0/1:18,0:18:9.20:156,0,9	0/1:31,0:31:66.44:293,0,66	0/1:43,2:31:99:215,0,494	1/1:38,0:38:19.68:338,20,0	0/1:48,0:42:99:179,0,236	1/1:11,0:11:23.59:179,24,0	0/1:47,0:47:99:340,0,239	0/1:34,0:34:99:186,0,208	0/1:50,0:50:88.61:300,0,89	0/1:44,0:44:28.14:184,0,28	0/1:31,0:31:99:169,0,179	0/0:33,0:33:76.05:0,76,1311	0/0:27,0:26:64.53:0,65,1063	0/0:30,0:20:54.09:0,54,881	0/0:21,0:21:57.19:0,57,1074	0/0:115,0:113:99:0,205,3599	0/1:33,0:33:33.10:208,0,33	0/1:15,0:15:0.52:153,0,1	0/1:53,0:53:90.16:194,0,90	0/1:18,0:18:4.38:48,0,4	0/1:37,4:40:99:800,0,266	0/1:9,9:20:14.93:298,0,15	0/1:5,0:6:7.27:158,0,7
chr10	23190836	.	A	ACT	703.35	PASS	AB=0.840;AC=4;AF=0.071;AN=56;BaseQRankSum=4.054;DP=965;FS=9.560;HRun=0;HaplotypeScore=340.9137;InbreedingCoeff=-0.0858;MQ=42.97;MQ0=20;MQRankSum=-3.906;QD=6.01;ReadPosRankSum=1.523;VQSLOD=1.6361;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,114,1613	0/0:13,0:13:35.31:0,35,479	0/0:27,0:5:15.01:0,15,187	0/0:47,0:8:10.62:0,11,204	0/0:23,0:23:24.52:0,25,191	0/0:20,0:20:14.19:0,14,130	0/0:33,0:33:71.66:0,72,793	0/1:41,1:28:65.69:66,0,615	0/0:41,0:41:55.64:0,56,508	0/0:49,0:44:99:0,102,1281	0/0:10,0:10:11.42:0,11,94	0/0:44,0:42:84.05:0,84,1050	0/0:38,0:38:85.80:0,86,946	0/0:50,0:50:76.10:0,76,910	0/0:42,0:42:32.17:0,32,300	0/0:33,0:33:69.42:0,69,830	0/0:30,0:30:75.15:0,75,1112	0/0:24,0:23:34.40:0,34,763	0/0:32,0:24:62.95:0,63,838	0/0:21,0:21:60.05:0,60,833	0/0:104,0:102:99:0,178,2376	0/0:35,0:35:38.87:0,39,390	0/0:15,0:15:22.18:0,22,253	0/0:57,0:57:85.98:0,86,1041	0/0:17,0:17:6:0,6,67	0/1:33,13:45:99:573,0,722	0/1:19,4:22:75.73:76,0,85	0/1:4,2:6:75.56:98,0,76
chr10	23190864	.	ACACACACACT	A	3114	PASS	AB=0.609;AC=11;AF=0.196;AN=56;BaseQRankSum=0.241;DP=1021;FS=4.221;HRun=0;HaplotypeScore=397.5253;InbreedingCoeff=0.8336;MQ=45.73;MQ0=20;MQRankSum=-2.755;QD=16.13;ReadPosRankSum=0.498;VQSLOD=0.5520;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:87.54:0,88,3472	1/1:3,4:7:5.99:100,6,0	0/0:31,0:3:3.01:0,3,60	0/0:45,0:8:8.82:0,9,221	0/0:26,0:26:38.89:0,39,1652	0/0:23,0:23:11.79:0,12,473	0/0:46,0:44:99:0,102,3616	0/0:44,0:33:62.38:0,62,1378	0/0:49,0:49:48.52:0,49,1857	0/0:54,0:51:99:0,111,3480	0/0:12,0:11:11.92:0,12,459	0/0:52,0:50:75.04:0,75,2703	0/0:53,0:53:89.69:0,90,2915	0/0:57,0:57:66.06:0,66,2643	0/0:57,0:56:38.79:0,39,1627	0/0:37,0:37:59.85:0,60,2038	1/1:26,3:29:12.50:774,13,0	1/1:18,1:18:4.94:429,5,0	1/1:25,11:27:42.14:1154,42,0	0/1:5,9:14:0.04:0,0,0	1/1:80,8:84:40.85:815,41,0	0/0:26,0:26:26.53:0,27,1165	0/0:20,0:20:20.92:0,21,777	0/0:64,0:64:95.90:0,96,3940	0/0:18,0:18:24.07:0,24,972	0/0:42,0:39:84.29:0,84,3372	0/0:20,0:20:21.65:0,22,721	0/0:7,0:7:12.04:0,12,419
chr10	23190922	.	TCATGCACACA	T	1136.63	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=1.805;DP=1056;FS=11.016;HRun=0;HaplotypeScore=344.4551;InbreedingCoeff=0.5729;MQ=54.61;MQ0=34;MQRankSum=-5.671;QD=6.89;ReadPosRankSum=-1.419;VQSLOD=0.5445;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,102,4617	0/0:9,0:9:19.88:0,20,565	0/1:75,0:20:9.09:9,0,580	0/0:91,0:19:42.37:0,42,776	0/0:22,0:22:65.89:0,66,1802	0/0:20,0:20:21.45:0,21,608	0/0:58,0:58:99:0,122,2994	0/1:28,0:19:51.73:109,0,52	0/0:56,0:56:99:0,109,2687	0/0:34,0:34:96.33:0,96,2572	0/0:11,0:10:27.09:0,27,691	0/0:60,0:59:99:0,128,3464	0/0:53,0:53:88.16:0,88,2388	0/0:54,0:54:91.50:0,91,2566	0/0:56,0:56:99:0,102,2912	0/0:42,0:41:87.23:0,87,2397	0/1:23,0:22:32.80:33,0,1039	0/0:18,0:18:50.95:0,51,1266	0/0:35,0:32:86.73:0,87,1954	0/0:5,0:5:5.89:0,6,194	0/0:102,0:98:99:0,113,3159	0/0:18,0:18:40.68:0,41,1009	0/0:18,0:18:27.88:0,28,761	0/0:71,0:69:99:0,129,3347	0/0:17,0:17:46.97:0,47,1243	1/1:16,5:20:27.86:643,28,0	1/1:7,5:12:12.68:189,13,0	1/1:2,3:5:12.04:306,12,0
chr10	23190924	.	ATG	A	195.58	PASS	AB=0.974;AC=11;AF=0.196;AN=56;BaseQRankSum=3.096;DP=1045;FS=1.010;HRun=0;HaplotypeScore=235.7019;InbreedingCoeff=0.1366;MQ=54.83;MQ0=36;MQRankSum=-3.426;QD=0.94;ReadPosRankSum=-1.731;VQSLOD=1.8829;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,105,1996	0/1:9,0:9:3.33:3,0,29	0/1:69,3:20:10.05:10,0,514	0/0:87,0:18:29.44:0,29,502	0/0:22,0:22:46.88:0,47,293	0/0:19,0:19:14.93:0,15,138	0/0:57,0:57:99:0,109,919	0/1:28,0:17:20.98:21,0,36	0/0:54,2:56:41.82:0,42,383	0/0:33,0:33:81.55:0,82,824	0/0:11,0:10:17.17:0,17,164	0/0:57,1:57:3.14:0,3,403	0/0:53,1:54:24.40:0,24,356	0/0:54,0:54:1.35:0,1,331	0/0:56,1:57:93.85:0,94,549	0/0:42,1:41:75.53:0,76,531	0/1:22,2:23:74.84:75,0,185	0/0:19,0:18:33.16:0,33,115	0/0:33,0:30:68.21:0,68,608	0/0:4,1:5:5.15:0,5,21	0/0:97,4:97:89.83:0,90,704	0/0:17,0:17:32.69:0,33,304	0/1:16,1:17:20.41:20,0,133	0/0:70,1:70:99:0,113,787	0/1:17,0:17:2.31:2,0,216	0/1:21,0:20:12.01:125,0,12	1/1:12,0:12:4.06:49,4,0	1/1:5,0:5:8.64:28,9,0
chr10	23190926	.	GCA	G	15089.63	PASS	AB=0.991;AC=49;AF=0.875;AN=56;BaseQRankSum=3.685;DP=1047;FS=1.899;HRun=0;HaplotypeScore=182.4531;InbreedingCoeff=0.4629;MQ=54.92;MQ0=37;MQRankSum=1.441;QD=16.51;ReadPosRankSum=2.172;VQSLOD=5.1608;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:42:96.34:0,96,1547	1/1:2,6:8:18.05:221,18,0	0/1:70,2:18:24.58:25,0,159	0/0:88,1:19:14.95:0,15,206	1/1:10,12:22:60.19:735,60,0	1/1:3,16:20:14.42:183,14,0	1/1:14,44:59:86.90:1044,87,0	0/1:26,0:16:7.13:49,0,7	1/1:15,42:57:70.88:990,71,0	1/1:15,18:33:60.19:738,60,0	1/1:4,7:10:21.07:258,21,0	1/1:8,50:57:99:1389,114,0	1/1:12,43:55:46.01:916,46,0	1/1:9,44:54:78.24:959,78,0	1/1:7,50:57:84.26:1034,84,0	1/1:7,35:41:69.05:826,69,0	1/1:10,13:23:43.29:488,43,0	1/1:3,16:18:50.75:601,51,0	1/1:11,22:30:58.51:645,59,0	1/1:3,2:5:6.02:74,6,0	1/1:37,62:97:99:1425,123,0	1/1:7,10:16:27.08:332,27,0	1/1:4,15:19:22.39:292,22,0	1/1:13,54:68:99:1292,105,0	1/1:5,12:17:40.01:482,40,0	0/1:18,0:17:21.88:31,0,22	1/1:12,0:12:5.91:23,6,0	1/1:5,0:5:8.44:35,8,0
chr10	23190942	.	ACT	A	4839.28	PASS	AB=0.993;AC=37;AF=0.661;AN=56;BaseQRankSum=16.103;DP=1064;FS=10.105;HRun=0;HaplotypeScore=201.8000;InbreedingCoeff=-0.1296;MQ=50.29;MQ0=51;MQRankSum=0.985;QD=5.12;ReadPosRankSum=12.481;VQSLOD=1.5120;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:45:99:0,114,1824	0/1:11,0:11:22.18:91,0,22	0/0:71,0:10:8.80:0,9,184	0/1:102,0:8:0.56:1,0,182	1/1:24,0:23:22.03:231,22,0	0/1:20,0:20:45.09:45,0,48	0/1:56,0:56:99:267,0,101	1/1:10,5:11:29.43:244,29,0	1/1:53,0:53:0.51:302,1,0	0/1:27,0:25:13.15:125,0,13	0/1:14,0:13:4.48:65,0,4	1/1:62,0:61:2.82:436,3,0	0/1:58,1:59:99:301,0,154	1/1:53,0:53:21.02:329,21,0	1/1:57,0:57:26.30:290,26,0	0/1:45,0:43:54.63:200,0,55	0/1:30,2:31:71.46:195,0,71	0/1:25,0:23:1.74:227,0,2	0/1:30,0:28:26.38:177,0,26	0/1:8,0:8:5.43:5,0,43	0/1:103,4:104:99:320,0,238	1/1:16,0:15:13.05:97,13,0	0/1:20,0:20:1.20:137,0,1	0/1:67,0:66:39.60:327,0,40	1/1:19,0:19:15.59:163,16,0	1/1:12,0:12:27.31:149,27,0	1/1:7,0:7:8.89:42,9,0	1/1:4,0:4:11.78:73,12,0
chr10	23190944	.	TCA	T	545.11	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=7.793;DP=1079;FS=3.900;HRun=0;HaplotypeScore=223.0802;InbreedingCoeff=0.9219;MQ=49.68;MQ0=50;MQRankSum=-5.555;QD=14.73;ReadPosRankSum=-0.969;VQSLOD=3.3885;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:47:99:0,108,1742	0/0:10,0:11:23.44:0,23,162	0/0:68,0:8:12.04:0,12,178	0/0:104,1:9:9.89:0,10,195	0/0:23,0:22:41.36:0,41,256	0/0:20,0:20:21.18:0,21,184	0/0:57,0:57:95.39:0,95,761	1/1:10,5:11:21.77:246,22,0	0/0:55,0:55:74.07:0,74,472	0/0:27,0:25:55.88:0,56,446	0/0:14,0:13:29.95:0,30,201	0/0:64,0:63:91.78:0,92,659	0/0:60,0:60:61.77:0,62,677	0/0:54,0:54:72.66:0,73,460	0/0:63,0:63:97.77:0,98,572	0/0:45,0:43:79.76:0,80,574	0/0:32,0:31:42.78:0,43,397	0/0:25,0:23:20.07:0,20,227	0/0:30,0:27:40.46:0,40,362	0/0:8,0:8:20.63:0,21,203	0/0:104,0:107:99:0,139,1291	0/0:18,0:17:39.63:0,40,236	0/0:18,0:18:8.12:0,8,115	0/0:67,0:66:99:0,116,724	0/0:19,0:19:48.89:0,49,287	1/1:1,10:11:14.49:275,14,0	1/1:0,7:7:9.08:80,9,0	1/1:0,4:4:11.05:94,11,0
chr10	23190970	.	TCA	T	86.41	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.754;DP=1070;FS=9.690;HRun=0;HaplotypeScore=218.2722;InbreedingCoeff=0.8156;MQ=50.00;MQ0=44;MQRankSum=-8.704;QD=2.11;ReadPosRankSum=-1.875;VQSLOD=0.9616;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,108,1792	0/0:9,0:9:24.04:0,24,347	0/0:50,2:7:9.03:0,9,156	0/0:89,0:10:6.81:0,7,209	0/0:20,0:19:39.11:0,39,611	0/0:17,0:17:32.76:0,33,516	0/0:62,0:62:99:0,147,2416	1/1:22,1:19:9.85:96,10,0	0/0:47,0:47:84.02:0,84,1361	0/0:25,1:24:26.21:0,26,904	0/0:15,0:15:36.11:0,36,591	0/0:58,0:57:99:0,135,2219	0/0:53,0:53:99:0,132,2108	0/0:44,0:44:84.24:0,84,1360	0/0:46,0:46:90.28:0,90,1460	0/0:49,0:47:99:0,102,1681	0/0:38,0:37:5.27:0,5,1221	0/0:30,0:28:50.64:0,51,1124	0/0:40,1:32:87.26:0,87,1420	0/0:16,0:16:42.14:0,42,706	0/0:135,1:129:99:0,254,4215	0/0:17,1:17:42.13:0,42,693	0/0:16,0:15:29.22:0,29,511	0/0:72,0:71:99:0,143,2282	0/0:19,0:19:48.14:0,48,795	1/1:12,0:12:17.08:49,17,0	0/0:9,0:9:3.07:0,3,36	1/1:4,2:5:8.95:70,9,0
chr10	23190978	.	ACT	A	61.96	PASS	AB=0.989;AC=8;AF=0.143;AN=56;BaseQRankSum=9.051;DP=1036;FS=0.000;HRun=0;HaplotypeScore=209.4889;InbreedingCoeff=0.3609;MQ=51.25;MQ0=41;MQRankSum=-6.548;QD=0.58;ReadPosRankSum=-2.258;VQSLOD=1.8809;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,120,1965	0/1:9,0:9:17.87:18,0,229	0/0:44,0:6:12.02:0,12,187	0/0:74,0:10:5.65:0,6,181	0/0:19,0:18:38.78:0,39,669	0/0:16,0:16:29.70:0,30,564	0/0:59,0:59:99:0,147,2448	0/1:28,0:22:5.91:18,0,6	0/0:44,0:44:89.85:0,90,1377	0/0:24,0:23:36.02:0,36,1018	0/0:14,0:14:36.11:0,36,637	0/0:54,0:52:99:0,135,2446	0/0:52,0:52:99:0,131,2263	0/0:40,0:40:87.07:0,87,1396	0/0:45,0:45:87.09:0,87,1393	0/0:46,0:44:92.96:0,93,1742	0/1:42,2:43:72.46:72,0,1479	0/0:29,1:29:35.28:0,35,1249	0/0:41,0:32:90.20:0,90,1464	0/0:18,0:18:46.75:0,47,808	0/0:134,2:131:99:0,269,4797	0/0:20,0:19:45.06:0,45,767	0/0:17,0:16:20.24:0,20,571	0/0:69,0:68:99:0,125,2379	0/0:20,0:20:50.82:0,51,828	1/1:12,0:12:2.51:29,3,0	0/1:9,0:9:5.61:28,0,6	1/1:5,0:4:5.38:26,5,0
chr10	23190980	.	T	TTA	1031.31	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=8.945;DP=1046;FS=38.281;HRun=0;HaplotypeScore=213.0182;InbreedingCoeff=0.8805;MQ=51.10;MQ0=41;MQRankSum=-8.553;QD=16.37;ReadPosRankSum=-2.406;VQSLOD=1.7089;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,114,1747	0/0:8,0:8:21:0,21,248	0/0:44,0:6:12.01:0,12,164	0/0:65,0:10:9.46:0,9,147	0/0:17,0:16:39.13:0,39,620	0/0:17,0:17:33:0,33,512	0/0:58,0:58:99:0,147,2090	1/1:28,6:28:62.81:741,63,0	0/0:44,0:44:90.14:0,90,1255	0/0:25,0:24:71.39:0,71,1032	0/0:15,0:15:36.11:0,36,561	0/0:55,0:53:99:0,138,2092	0/0:54,0:54:99:0,132,2004	0/0:39,0:39:84.08:0,84,1226	0/0:43,0:43:86.93:0,87,1221	0/0:47,0:46:99:0,108,1577	0/0:45,0:44:83.72:0,84,1473	0/0:32,0:31:83.64:0,84,1212	0/0:43,0:34:90.21:0,90,1299	0/0:18,0:18:51.13:0,51,776	0/0:137,0:132:99:0,286,4361	0/0:20,0:19:45.14:0,45,703	0/0:17,0:16:33.58:0,34,536	0/0:69,0:68:99:0,138,2068	0/0:20,0:20:51.14:0,51,761	1/1:13,1:14:15.06:221,15,0	1/1:10,0:10:2.47:163,2,0	1/1:5,0:4:5.50:47,6,0
chr10	23191048	.	T	TCA	3638.34	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-4.355;DP=873;FS=28.139;HRun=0;HaplotypeScore=141.9684;InbreedingCoeff=0.9969;MQ=56.73;MQ0=6;MQRankSum=-6.637;QD=31.10;ReadPosRankSum=-3.014;VQSLOD=2.2322;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:78.21:0,78,975	0/0:12,0:12:36.12:0,36,458	0/0:34,0:18:41.83:0,42,467	0/0:40,0:23:43.15:0,43,540	0/0:16,0:16:42.13:0,42,534	0/0:16,0:16:42.01:0,42,534	0/0:42,0:42:99:0,114,1398	1/1:17,36:50:62.52:1407,63,0	0/0:35,0:35:87.28:0,87,1105	0/0:35,0:35:78.15:0,78,940	0/0:9,0:9:21.05:0,21,252	0/0:37,0:37:84.15:0,84,1047	0/0:38,0:38:90.27:0,90,1130	0/0:40,0:40:99:0,99,1231	0/0:31,0:31:78.21:0,78,977	0/0:26,0:26:66.17:0,66,811	0/0:35,0:35:40.67:0,41,905	0/0:26,0:26:69.17:0,69,842	0/0:34,0:32:63.18:0,63,774	0/0:13,0:13:27.09:0,27,343	0/0:121,0:121:99:0,279,3446	0/0:16,0:16:33.11:0,33,420	0/0:8,0:8:21.07:0,21,267	0/0:44,0:44:78.16:0,78,944	0/0:16,0:16:39.12:0,39,496	1/1:11,24:35:75.25:1240,75,0	1/1:3,12:16:33.11:551,33,0	1/1:4,8:12:27.09:440,27,0
chr10	23191122	.	G	GAC	7892.40	PASS	AB=0.673;AC=31;AF=0.554;AN=56;BaseQRankSum=-5.140;DP=661;FS=24.972;HRun=0;HaplotypeScore=102.7492;InbreedingCoeff=0.4507;MQ=53.84;MQ0=22;MQRankSum=-2.695;QD=19.93;ReadPosRankSum=-0.237;VQSLOD=2.7971;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:29:35.56:0,36,585	0/0:12,0:12:21.05:0,21,236	0/0:50,0:11:7.88:0,8,40	0/0:46,0:18:5.09:0,5,116	1/1:5,9:13:19.61:268,20,0	0/1:8,4:10:14.29:214,0,14	0/1:12,16:28:2.22:440,0,2	1/1:34,0:32:15.75:103,16,0	1/1:14,12:26:3.82:519,4,0	0/1:13,16:26:46.09:681,0,46	1/1:7,3:10:12.03:158,12,0	1/1:15,7:22:20.57:607,21,0	1/1:6,18:24:27.91:850,28,0	0/1:15,5:22:55.67:281,0,56	0/1:8,15:23:25.50:570,0,26	1/1:10,11:20:12.79:606,13,0	0/0:28,0:30:50.64:0,51,660	0/0:19,0:20:41.90:0,42,443	0/0:24,0:23:41.58:0,42,415	0/0:15,0:18:35.54:0,36,343	0/0:32,0:32:33.01:0,33,376	0/1:7,8:15:20.29:174,0,20	0/1:6,6:12:43.59:302,0,44	1/1:18,15:33:58.32:848,58,0	1/1:7,19:26:48.16:757,48,0	1/1:26,0:26:41.83:352,42,0	1/1:9,0:8:8.97:69,9,0	1/1:10,0:10:11.48:92,11,0
chr10	23191130	.	C	CACAG	2586.27	PASS	AB=1.000;AC=14;AF=0.250;AN=56;BaseQRankSum=7.642;DP=621;FS=1.208;HRun=0;HaplotypeScore=140.1044;InbreedingCoeff=0.4105;MQ=56.09;MQ0=21;MQRankSum=-4.353;QD=12.93;ReadPosRankSum=4.911;VQSLOD=2.9326;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:68.95:0,69,1069	0/0:13,0:13:30.06:0,30,464	0/0:50,0:14:22.83:0,23,272	0/0:40,0:15:30.83:0,31,319	0/0:14,0:13:3.63:0,4,50	0/0:11,0:9:5.78:0,6,100	0/0:24,0:24:13.53:0,14,189	1/1:6,21:27:53.36:725,53,0	0/0:25,0:25:18.56:0,19,221	0/0:29,0:26:14.72:0,15,331	0/0:10,0:10:3.47:0,3,29	0/0:19,0:19:8.81:0,9,122	0/1:24,0:24:13.81:14,0,75	0/1:20,0:20:74.38:74,0,229	0/0:20,0:20:4.49:0,4,164	0/0:21,0:20:6.58:0,7,139	0/0:33,0:32:71.91:0,72,1251	0/0:19,0:19:51.12:0,51,782	0/0:26,0:21:56.49:0,56,814	0/0:17,0:17:45.11:0,45,674	0/0:23,0:23:52.62:0,53,777	0/1:12,0:12:0.30:0,0,50	0/1:12,0:12:0.06:0,0,102	0/1:31,0:31:39.48:39,0,85	0/1:23,0:23:5.91:6,0,30	1/1:16,10:26:62.14:1073,62,0	1/1:7,3:9:21.02:351,21,0	1/1:9,4:13:27.03:469,27,0
chr10	23191188	.	GTT	G	6413.27	PASS	AB=0.958;AC=51;AF=0.911;AN=56;BaseQRankSum=0.924;DP=365;FS=23.978;HRun=11;HaplotypeScore=78.6045;InbreedingCoeff=0.7103;MQ=80.44;MQ0=4;MQRankSum=-0.026;QD=20.49;ReadPosRankSum=2.297;VQSLOD=2.2401;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:20:47.63:0,48,664	1/1:1,5:6:15.03:160,15,0	0/1:22,0:13:3.15:3,0,53	0/0:31,1:22:3.01:0,3,151	1/1:1,13:14:39.10:415,39,0	1/1:0,11:11:33:336,33,0	1/1:2,2:4:11.99:110,12,0	1/1:12,0:28:17.35:145,17,0	1/1:4,6:10:21.05:223,21,0	1/1:5,10:15:33.08:350,33,0	1/1:3,7:10:21.05:223,21,0	1/1:0,6:6:18.05:192,18,0	1/1:3,9:12:30.05:309,30,0	1/1:1,4:5:12.03:128,12,0	1/1:2,9:11:30.06:311,30,0	1/1:3,10:13:33.08:350,33,0	1/1:4,14:18:42.06:437,42,0	1/1:4,8:14:26.70:309,27,0	1/1:3,10:13:33.06:349,33,0	1/1:0,12:12:36.09:383,36,0	1/1:2,3:5:9.02:96,9,0	1/1:1,10:11:26.98:272,27,0	1/1:1,9:11:29.72:284,30,0	1/1:2,12:14:30.06:318,30,0	1/1:7,13:20:42.08:446,42,0	1/1:1,0:9:19.21:84,19,0	1/1:0,0:11:30.19:132,30,0	1/1:2,0:6:10.97:48,11,0
chr10	23191251	.	T	TTATA	2162.52	PASS	AB=0.974;AC=37;AF=0.685;AN=54;BaseQRankSum=-2.506;DP=176;FS=27.537;HRun=0;HaplotypeScore=49.3463;InbreedingCoeff=0.2535;MQ=72.47;MQ0=4;MQRankSum=1.545;QD=17.30;ReadPosRankSum=-0.494;VQSLOD=1.1075;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:8:20.99:0,21,246	0/1:5,0:5:7.09:56,0,7	0/0:5,0:5:11.99:0,12,123	0/0:9,0:7:5.23:0,5,88	1/1:7,1:8:20.98:254,21,0	1/1:3,1:4:11.95:150,12,0	1/1:1,0:1:3:25,3,0	0/0:21,0:16:0.68:0,1,58	1/1:3,0:3:8.98:73,9,0	1/1:4,0:4:11.97:153,12,0	1/1:4,0:4:11.86:85,12,0	1/1:3,0:3:7.24:53,7,0	0/1:3,0:3:11.21:40,0,11	1/1:0,1:1:3.01:81,3,0	1/1:3,0:3:8.99:75,9,0	1/1:3,0:3:8.99:75,9,0	0/1:15,0:16:99:139,0,112	0/1:12,0:12:55.94:145,0,56	1/1:11,0:11:33:294,33,0	1/1:4,0:4:11.98:98,12,0	./.	1/1:6,0:6:11.98:100,12,0	0/1:3,0:3:11.02:11,0,14	1/1:3,0:3:2.92:17,3,0	1/1:12,1:13:35.98:392,36,0	0/1:6,0:6:7.48:7,0,25	0/1:8,0:8:5.47:5,0,25	0/0:6,0:5:7.99:0,8,40
chr10	23191333	.	A	AACT	9965.31	PASS	AB=0.900;AC=43;AF=0.768;AN=56;BaseQRankSum=-9.180;DP=265;FS=21.538;HRun=0;HaplotypeScore=47.1851;InbreedingCoeff=0.7654;MQ=92.44;MQ0=0;MQRankSum=-5.617;QD=55.36;ReadPosRankSum=0.022;VQSLOD=4.1175;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:24.08:0,24,400	1/1:0,1:2:3.01:68,3,0	0/0:18,0:17:39.31:0,39,679	0/0:12,0:12:15.97:0,16,377	1/1:2,7:9:24.08:511,24,0	1/1:0,6:6:18.06:407,18,0	1/1:0,2:2:6.02:136,6,0	0/0:21,0:20:57.19:0,57,941	1/1:2,10:12:33.11:734,33,0	1/1:0,10:10:30.10:679,30,0	1/1:0,8:9:21.07:460,21,0	1/1:1,6:7:21.07:463,21,0	1/1:0,7:7:21.07:461,21,0	1/1:0,6:6:18.06:406,18,0	1/1:0,6:6:18.06:407,18,0	1/1:2,10:13:33.07:683,33,0	1/1:2,13:15:42.14:941,42,0	1/1:0,16:18:45.15:1006,45,0	1/1:4,9:13:19.99:777,20,0	1/1:0,1:1:3.01:68,3,0	1/1:0,6:6:18.06:365,18,0	1/1:1,6:6:12.04:257,12,0	1/1:1,3:4:9.03:190,9,0	1/1:2,2:4:2.66:23,3,0	1/1:0,14:14:42.14:878,42,0	0/1:8,1:9:47:47,0,249	0/0:11,0:11:33.11:0,33,550	0/0:13,0:13:39.13:0,39,649
chr10	23191349	.	TA	T	1733.46	PASS	AB=0.529;AC=7;AF=0.125;AN=56;BaseQRankSum=-5.626;DP=262;FS=27.581;HRun=2;HaplotypeScore=62.9169;InbreedingCoeff=0.7016;MQ=92.79;MQ0=0;MQRankSum=-1.315;QD=32.10;ReadPosRankSum=-0.671;VQSLOD=1.5808;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:7:21.07:0,21,315	0/0:3,0:3:9.03:0,9,135	0/0:14,0:14:13.97:0,14,285	0/0:14,0:14:30.47:0,30,313	0/0:9,0:9:27.09:0,27,403	0/0:6,0:6:18.06:0,18,269	0/0:3,0:3:9.03:0,9,135	1/1:3,16:19:45.15:584,45,0	0/0:12,0:12:36.12:0,36,538	0/0:13,0:13:39.13:0,39,584	0/0:10,0:10:30.06:0,30,405	0/0:9,0:9:24.08:0,24,359	0/0:6,0:6:18.06:0,18,269	0/0:7,0:7:21.07:0,21,314	0/0:5,0:5:15.05:0,15,225	0/0:15,0:15:39.13:0,39,584	0/0:12,0:12:27.73:0,28,421	0/0:15,0:15:33.09:0,33,473	0/0:9,0:9:27.09:0,27,405	0/0:1,0:1:3.01:0,3,45	0/0:9,0:9:24.08:0,24,359	0/0:7,0:6:15.05:0,15,224	0/0:4,0:4:12.04:0,12,180	0/0:4,0:4:3.44:0,3,21	0/0:14,0:14:42.14:0,42,629	0/1:1,8:9:17.89:284,0,18	1/1:0,12:12:36.12:467,36,0	1/1:0,14:14:42.14:545,42,0
chr10	23191567	.	TCTCCTC	T	80.61	PASS	AB=1.000;AC=9;AF=0.205;AN=44;BaseQRankSum=-1.692;DP=331;FS=7.135;HRun=0;HaplotypeScore=83.2047;InbreedingCoeff=0.2934;MQ=68.76;MQ0=10;MQRankSum=-1.537;QD=0.83;ReadPosRankSum=-1.247;VQSLOD=0.8614;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:3.87:0,4,25	./.	./.	./.	0/0:18,0:18:7.93:0,8,43	0/0:15,0:15:11.46:0,11,35	0/0:13,0:11:12.16:0,12,69	1/1:22,4:26:7.75:131,8,0	./.	0/0:18,0:17:10.93:0,11,34	0/0:20,0:20:2.90:0,3,16	0/0:5,0:5:2.04:0,2,6	0/0:8,0:8:6.91:0,7,25	0/0:7,0:7:5.90:0,6,40	0/0:9,0:8:4.83:0,5,19	0/0:11,0:11:10.97:0,11,61	1/1:10,0:9:2.90:17,3,0	0/0:13,0:13:7.15:0,7,41	0/0:7,0:7:3.01:0,3,84	./.	0/1:20,0:18:2.87:3,0,50	0/1:21,0:19:0.36:0,0,1	0/0:9,0:9:3.81:0,4,19	0/1:12,0:12:8.89:9,0,10	0/0:11,0:11:5.31:0,5,14	./.	1/1:8,0:8:3.01:30,3,0	0/0:4,0:3:3.01:0,3,51
chr10	23192115	.	AC	A	2360.47	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=9.052;DP=486;FS=1.702;HRun=4;HaplotypeScore=43.5585;InbreedingCoeff=0.9913;MQ=59.98;MQ0=0;MQRankSum=0.733;QD=28.44;ReadPosRankSum=-0.619;VQSLOD=2.5762;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:75.23:0,75,1023	0/0:13,0:13:39.12:0,39,528	0/0:15,0:9:27.07:0,27,334	0/0:13,0:7:18.01:0,18,213	0/0:22,0:22:66.21:0,66,902	0/0:14,0:14:39.11:0,39,527	0/0:13,0:13:39.10:0,39,509	1/1:4,25:29:72.19:837,72,0	0/0:13,0:13:39.13:0,39,545	0/0:16,0:16:45.14:0,45,612	0/0:20,0:20:54.17:0,54,738	0/0:7,0:7:21.07:0,21,294	0/0:17,0:17:51.17:0,51,710	0/0:23,0:23:69.23:0,69,963	0/0:11,0:11:30.10:0,30,420	0/0:9,0:9:27.08:0,27,361	0/0:39,0:39:99:0,114,1472	0/0:25,0:25:69.21:0,69,946	0/0:20,0:20:54.13:0,54,701	0/0:21,0:21:60.19:0,60,820	0/0:12,0:12:36.07:0,36,449	0/0:7,0:7:21.07:0,21,292	0/0:8,0:8:18.06:0,18,250	0/0:14,0:14:39.13:0,39,543	0/0:23,0:23:63.20:0,63,856	1/1:3,20:23:21.20:677,21,0	1/1:0,16:16:42.13:503,42,0	1/1:0,15:15:42.13:504,42,0
chr10	23196379	.	A	ATC	271.41	PASS	AC=6;AF=0.111;AN=54;BaseQRankSum=5.652;DP=670;FS=6.646;HRun=0;HaplotypeScore=95.9772;InbreedingCoeff=0.8790;MQ=48.88;MQ0=30;MQRankSum=-5.488;QD=14.28;ReadPosRankSum=0.004;VQSLOD=2.9409;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:60.15:0,60,920	0/0:13,0:13:39.13:0,39,636	0/0:16,0:2:6.02:0,6,97	0/0:28,0:3:8.76:0,9,98	0/0:34,0:34:90.29:0,90,1441	0/0:32,0:32:87.25:0,87,1389	0/0:29,0:29:75.21:0,75,1180	./.	0/0:27,0:26:66.19:0,66,1047	0/0:32,0:32:96.32:0,96,1539	0/0:16,0:16:48.16:0,48,783	0/0:23,0:23:63.14:0,63,970	0/0:43,0:43:99:0,105,1708	0/0:41,0:41:99:0,111,1774	0/0:25,0:25:63.22:0,63,1025	0/0:32,0:32:87.22:0,87,1361	0/0:43,0:43:90.31:0,90,1465	0/0:28,0:26:72.25:0,72,1174	0/0:19,0:11:33.11:0,33,538	0/0:25,0:25:72.25:0,72,1172	0/0:17,0:17:45.15:0,45,733	0/0:29,0:29:81.28:0,81,1322	0/0:26,0:26:75.26:0,75,1224	0/0:25,0:25:51.17:0,51,832	0/0:23,0:22:63.22:0,63,1028	1/1:1,4:4:9.03:113,9,0	1/1:0,9:9:18.05:214,18,0	1/1:0,5:2:6.02:70,6,0
chr10	23196380	.	AT	A	74.22	PASS	AC=6;AF=0.111;AN=54;BaseQRankSum=5.665;DP=679;FS=6.646;HRun=1;HaplotypeScore=86.4313;InbreedingCoeff=0.8771;MQ=48.71;MQ0=35;MQRankSum=-5.506;QD=4.12;ReadPosRankSum=-0.098;VQSLOD=0.1401;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:60.05:0,60,874	0/0:13,0:13:39.13:0,39,607	0/0:19,0:2:6.02:0,6,78	0/0:28,0:3:8.89:0,9,83	0/0:33,0:33:87.28:0,87,1336	0/0:32,0:32:93.15:0,93,1352	0/0:29,0:29:75.11:0,75,1080	./.	0/0:25,0:24:63.21:0,63,972	0/0:33,0:32:96.32:0,96,1482	0/0:17,0:17:51.16:0,51,775	0/0:24,0:24:66.07:0,66,936	0/0:43,0:43:99:0,105,1580	0/0:41,0:41:99:0,114,1649	0/0:26,0:26:63.08:0,63,923	0/0:32,0:32:87.20:0,87,1282	0/0:44,0:43:90.30:0,90,1406	0/0:29,0:27:72.25:0,72,1125	0/0:20,0:11:33.11:0,33,513	0/0:25,0:25:72.21:0,72,1080	0/0:17,0:17:45.08:0,45,673	0/0:29,0:29:81.28:0,81,1266	0/0:27,0:27:78.25:0,78,1194	0/0:24,0:24:54.12:0,54,813	0/0:24,0:23:63.19:0,63,938	1/1:0,4:3:8.88:59,9,0	1/1:0,9:9:17.58:107,18,0	1/1:0,5:2:5.85:34,6,0
chr10	23196561	.	CAACTGG	C	1452.20	PASS	AC=4;AF=0.074;AN=54;BaseQRankSum=5.342;DP=692;FS=5.338;HRun=0;HaplotypeScore=128.6824;InbreedingCoeff=0.9905;MQ=46.15;MQ0=31;MQRankSum=-6.936;QD=37.24;ReadPosRankSum=1.076;VQSLOD=3.2921;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:43:99:0,105,3591	0/0:13,0:13:36.12:0,36,1246	./.	0/0:30,0:6:18.06:0,18,494	0/0:27,0:23:60.16:0,60,1848	0/0:18,0:18:45.15:0,45,1558	0/0:26,0:22:57.07:0,57,1973	0/0:28,0:20:51.14:0,51,1684	0/0:27,0:27:69.20:0,69,2259	0/0:27,0:25:72.25:0,72,2430	0/0:22,0:19:51.09:0,51,1595	0/0:20,0:20:54.19:0,54,1870	0/0:36,0:36:72.14:0,72,2472	0/0:24,0:24:66.23:0,66,2271	1/1:2,16:17:27.09:611,27,0	1/1:0,21:21:45.14:962,45,0	0/0:32,0:26:63.22:0,63,2148	0/0:17,0:15:33.11:0,33,1143	0/0:13,0:9:27.08:0,27,857	0/0:38,0:35:96.24:0,96,3109	0/0:36,0:34:93.32:0,93,3222	0/0:26,0:24:60.21:0,60,2034	0/0:26,0:22:60.21:0,60,1956	0/0:28,0:27:60.21:0,60,2034	0/0:20,0:16:45.15:0,45,1557	0/0:16,0:16:42.14:0,42,1329	0/0:27,0:27:66.22:0,66,2280	0/0:6,0:6:18.06:0,18,620
chr10	23197043	.	TA	T	2601.20	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=6.403;DP=538;FS=8.102;HRun=9;HaplotypeScore=119.1368;InbreedingCoeff=0.9629;MQ=59.60;MQ0=2;MQRankSum=-0.163;QD=21.15;ReadPosRankSum=1.383;VQSLOD=2.9058;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,36:40:99:933,102,0	1/1:0,9:9:27.01:247,27,0	0/0:12,0:7:14.03:0,14,143	0/0:2,0:2:3.01:0,3,34	0/0:27,1:28:63.17:0,63,717	0/0:19,0:19:54.16:0,54,623	0/0:10,0:9:27.08:0,27,312	0/0:13,0:35:71.86:0,72,382	0/0:16,0:16:42.12:0,42,485	0/0:19,0:19:51.15:0,51,586	0/0:23,0:23:57.16:0,57,649	0/0:22,0:22:51.15:0,51,585	0/0:27,0:27:78.23:0,78,899	0/0:18,0:18:54.15:0,54,611	0/0:4,0:26:65.88:0,66,393	0/0:2,0:14:34.09:0,34,173	1/1:1,17:18:45:412,45,0	1/1:2,9:10:24.01:220,24,0	1/1:4,11:15:32.98:302,33,0	1/1:1,20:21:54.01:493,54,0	1/1:1,8:9:21.01:192,21,0	0/0:20,0:20:45.13:0,45,519	0/0:18,0:18:45.13:0,45,516	0/0:8,0:8:21.05:0,21,231	0/0:23,0:23:48.13:0,48,546	0/0:0,0:24:65.96:0,66,342	0/0:3,0:30:67.67:0,68,354	0/0:2,0:16:41.67:0,42,203
chr10	23199522	.	CA	C	8313.02	PASS	AB=0.857;AC=39;AF=0.696;AN=56;BaseQRankSum=4.858;DP=653;FS=3.695;HRun=10;HaplotypeScore=83.4380;InbreedingCoeff=0.9112;MQ=74.85;MQ0=4;MQRankSum=0.240;QD=19.79;ReadPosRankSum=5.848;VQSLOD=5.3033;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:25:57.02:0,57,611	1/1:1,8:9:23.99:208,24,0	0/0:37,2:16:17.71:0,18,188	0/0:50,0:20:30.32:0,30,192	1/1:5,37:42:99:963,111,0	1/1:1,25:26:65.99:573,66,0	1/1:0,10:10:26.99:234,27,0	0/0:27,0:27:60.15:0,60,656	1/1:2,11:13:29.99:260,30,0	1/1:5,21:26:62.98:547,63,0	1/1:0,27:27:80.98:703,81,0	1/1:2,16:18:47.99:417,48,0	1/1:3,18:21:50.99:443,51,0	1/1:1,16:17:47.99:417,48,0	0/0:20,0:20:54.15:0,54,597	0/0:23,0:23:60.16:0,60,664	1/1:1,18:19:47.99:417,48,0	1/1:0,10:10:24:208,24,0	1/1:2,10:13:29.02:240,29,0	1/1:3,27:30:65.95:573,66,0	1/1:1,8:9:17.99:156,18,0	1/1:5,20:24:50.96:439,51,0	1/1:4,24:28:35.80:540,36,0	1/1:2,11:13:28:257,28,0	1/1:6,34:40:77.96:677,78,0	0/1:20,4:24:40.51:41,0,448	0/0:35,1:36:60.64:0,61,943	0/0:9,0:9:24.05:0,24,255
chr10	23200168	.	G	GA	14586.97	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-13.166;DP=545;FS=13.985;HRun=5;HaplotypeScore=44.1505;InbreedingCoeff=0.9951;MQ=82.64;MQ0=0;MQRankSum=-1.874;QD=34.16;ReadPosRankSum=1.348;VQSLOD=3.8095;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,20:22:57.16:733,57,0	0/0:5,0:5:15.04:0,15,161	0/0:17,0:17:48.11:0,48,507	0/0:13,0:13:29.21:0,29,326	1/1:1,23:24:69.11:867,69,0	1/1:0,28:28:78.25:1026,78,0	1/1:2,13:15:36.12:474,36,0	1/1:6,23:29:66.20:855,66,0	1/1:0,15:15:39.13:513,39,0	1/1:1,25:26:75.20:940,75,0	1/1:2,18:20:48.16:632,48,0	1/1:1,16:17:42.14:553,42,0	1/1:1,20:21:57.19:750,57,0	1/1:3,27:30:69.22:907,69,0	1/1:1,19:20:45.15:592,45,0	1/1:1,17:18:51.17:671,51,0	0/0:16,0:16:42.08:0,42,440	0/0:6,0:6:18.05:0,18,193	0/0:20,0:20:60.10:0,60,626	0/0:34,0:34:93.19:0,93,980	0/0:7,0:7:21.05:0,21,226	1/1:0,15:15:42.14:553,42,0	1/1:1,20:21:57.19:750,57,0	1/1:1,13:14:33.11:434,33,0	1/1:1,19:20:57.18:738,57,0	1/1:1,26:27:78.22:980,78,0	1/1:0,23:23:66.21:869,66,0	1/1:1,20:21:57.19:750,57,0
chr10	23201000	.	AAGG	A	4189.98	PASS	AB=0.528;AC=7;AF=0.125;AN=56;BaseQRankSum=11.192;DP=622;FS=2.514;HRun=0;HaplotypeScore=88.5526;InbreedingCoeff=0.8267;MQ=75.79;MQ0=0;MQRankSum=-5.612;QD=42.32;ReadPosRankSum=-0.465;VQSLOD=4.4031;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:45.15:0,45,1003	0/0:11,0:11:30.10:0,30,692	0/0:16,0:16:41.21:0,41,829	0/0:16,0:16:45.15:0,45,996	0/0:46,0:46:99:0,138,3124	0/0:18,0:18:54.17:0,54,1199	0/0:16,0:16:48.13:0,48,1059	1/1:2,20:22:57.16:897,57,0	0/0:22,0:22:66.20:0,66,1434	0/0:28,0:28:81.28:0,81,1856	0/0:29,0:29:87.30:0,87,1997	0/0:15,0:15:45.15:0,45,1038	0/0:28,0:28:84.28:0,84,1893	0/0:30,0:30:87.30:0,87,2001	0/0:31,0:31:93.31:0,93,2102	0/0:21,0:21:63.20:0,63,1406	0/0:4,0:4:12.02:0,12,231	0/0:7,0:7:21.07:0,21,483	0/0:14,0:14:39.13:0,39,891	0/0:37,0:37:99:0,111,2539	0/0:10,0:10:30.07:0,30,602	0/0:31,0:31:93.32:0,93,2126	0/0:38,0:38:99:0,114,2434	0/0:15,0:15:45.14:0,45,993	0/0:22,0:22:66.21:0,66,1460	0/1:3,25:28:60.21:1093,0,60	1/1:2,37:39:99:1688,99,0	1/1:0,10:10:30.10:511,30,0
chr10	23202767	.	C	CA	15463.94	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-4.392;DP=630;FS=14.854;HRun=5;HaplotypeScore=88.0814;InbreedingCoeff=0.9981;MQ=73.44;MQ0=1;MQRankSum=-0.615;QD=33.99;ReadPosRankSum=4.532;VQSLOD=3.4740;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,26:32:75.14:963,75,0	0/0:7,0:7:21.05:0,21,226	0/0:33,0:27:59.58:0,60,650	0/0:24,0:22:56.94:0,57,565	1/1:2,29:31:87.28:1145,87,0	1/1:1,25:26:69.22:908,69,0	1/1:2,7:9:21.06:261,21,0	1/1:4,40:44:99:1519,117,0	1/1:0,22:23:69.22:907,69,0	1/1:2,23:25:69.22:906,69,0	1/1:1,27:28:81.22:1046,81,0	1/1:1,9:10:27.09:355,27,0	1/1:6,12:18:39.59:500,40,0	1/1:2,30:32:84.27:1105,84,0	1/1:1,18:19:54.18:711,54,0	1/1:0,20:20:51.17:671,51,0	0/0:17,0:17:38.78:0,39,474	0/0:27,0:26:44.72:0,45,556	0/0:20,0:20:57.13:0,57,600	0/0:31,0:31:87.22:0,87,935	0/0:15,0:15:45.10:0,45,476	1/1:2,24:26:66.21:868,66,0	1/1:2,14:16:33.46:435,33,0	1/1:1,10:11:29.68:365,30,0	1/1:1,15:15:39.13:513,39,0	1/1:3,21:23:63.20:829,63,0	1/1:3,31:34:84.27:1100,84,0	1/1:2,9:11:27.09:355,27,0
chr10	23203309	.	T	TATA	1977.93	PASS	AC=4;AF=0.074;AN=54;BaseQRankSum=-7.399;DP=611;FS=4.371;HRun=0;HaplotypeScore=74.7448;InbreedingCoeff=0.9486;MQ=56.25;MQ0=9;MQRankSum=-0.408;QD=52.05;ReadPosRankSum=1.728;VQSLOD=5.5236;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:69.23:0,69,1058	0/0:8,0:8:21.07:0,21,322	./.	0/0:16,0:4:9.03:0,9,121	0/0:37,0:37:99:0,105,1589	0/0:23,0:23:63.20:0,63,945	0/0:17,0:14:33.11:0,33,506	0/0:39,0:35:87.29:0,87,1324	0/0:23,0:23:60.20:0,60,916	0/0:35,0:35:84.28:0,84,1280	0/0:15,0:15:42.14:0,42,644	0/0:21,0:21:54.18:0,54,828	0/0:22,0:22:57.19:0,57,864	0/0:13,0:13:33.11:0,33,506	1/1:3,19:23:57.20:1214,57,0	1/1:2,13:15:42.14:884,42,0	0/0:20,0:20:51.17:0,51,765	0/0:10,0:10:18.06:0,18,276	0/0:18,0:16:30.09:0,30,439	0/0:32,0:32:81.24:0,81,1190	0/0:25,0:25:69.23:0,69,1055	0/0:22,0:22:60.19:0,60,898	0/0:30,0:30:78.22:0,78,1164	0/0:11,0:11:24.08:0,24,368	0/0:23,0:23:63.21:0,63,966	0/0:31,0:31:78.25:0,78,1174	0/0:29,0:28:78.22:0,78,1131	0/0:6,0:6:12.04:0,12,184
chr10	23203634	.	T	TA	10516.26	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-0.998;DP=479;FS=12.130;HRun=4;HaplotypeScore=54.1112;InbreedingCoeff=0.9403;MQ=56.09;MQ0=5;MQRankSum=0.122;QD=33.49;ReadPosRankSum=0.723;VQSLOD=4.4841;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,15:15:45.15:615,45,0	0/0:3,0:3:6.02:0,6,68	0/0:10,0:4:9.03:0,9,102	0/0:20,0:13:1.34:0,1,299	1/1:1,22:23:57.19:779,57,0	1/1:2,24:26:63.21:862,63,0	1/1:0,9:9:24.08:328,24,0	1/1:1,22:20:48.03:564,48,0	1/1:1,15:16:33.11:452,33,0	1/1:0,21:20:57.18:766,57,0	1/1:2,10:12:24.08:328,24,0	1/1:1,8:9:21.07:287,21,0	1/1:0,19:19:48.16:655,48,0	1/1:1,23:24:60.20:820,60,0	0/0:17,0:17:45.13:0,45,510	0/0:24,1:25:34.13:0,34,747	0/0:13,0:13:36.10:0,36,408	0/0:22,1:23:60.13:0,60,659	0/0:14,0:12:33.09:0,33,374	0/0:22,0:22:63.18:0,63,710	0/0:18,0:18:45.10:0,45,498	1/1:0,16:16:33.11:451,33,0	1/1:0,21:20:60.20:820,60,0	1/1:2,13:15:33.11:451,33,0	1/1:0,17:17:48.16:657,48,0	1/1:0,16:16:48.16:655,48,0	1/1:3,19:22:48.16:656,48,0	1/1:1,9:10:27.09:369,27,0
chr10	23203761	.	AAAC	A	6304.27	PASS	AB=0.824;AC=40;AF=0.714;AN=56;BaseQRankSum=0.008;DP=592;FS=0.000;HRun=0;HaplotypeScore=162.5488;InbreedingCoeff=0.7334;MQ=63.66;MQ0=1;MQRankSum=-1.592;QD=13.16;ReadPosRankSum=4.394;VQSLOD=4.4325;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:33,0:33:10.95:174,11,0	0/0:7,0:7:13.72:0,14,47	0/0:16,0:12:35.50:0,36,443	0/0:16,0:14:5.02:0,5,487	1/1:36,0:36:88.27:387,88,0	1/1:26,0:26:49.79:172,50,0	1/1:11,0:11:14.23:49,14,0	1/1:0,20:20:60.10:818,60,0	1/1:15,0:14:9.33:82,9,0	1/1:41,0:41:36.33:266,36,0	1/1:28,0:28:55.73:209,56,0	1/1:16,0:16:37.75:143,38,0	1/1:24,0:24:46.98:247,47,0	1/1:16,0:15:36.42:141,36,0	1/1:25,0:25:54.54:189,55,0	1/1:26,0:26:47.21:175,47,0	0/0:21,0:21:41.13:0,41,185	0/0:14,0:14:5.34:0,5,74	0/1:18,0:17:73.60:74,0,91	0/0:28,0:28:28.80:0,29,170	0/0:11,0:11:3.48:0,3,37	1/1:27,1:28:58.62:293,59,0	1/1:23,0:23:30.18:104,30,0	1/1:10,0:10:24.31:93,24,0	1/1:24,0:24:42.35:145,42,0	1/1:0,19:19:57.17:896,57,0	1/1:6,23:29:87.27:1371,87,0	0/1:5,6:11:11.21:275,0,11
chr10	23203762	.	AAC	A	15823.53	PASS	AB=0.985;AC=49;AF=0.875;AN=56;BaseQRankSum=-1.386;DP=596;FS=11.647;HRun=0;HaplotypeScore=118.1222;InbreedingCoeff=0.4973;MQ=63.80;MQ0=1;MQRankSum=-1.005;QD=28.11;ReadPosRankSum=7.640;VQSLOD=5.2214;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,21:33:61.85:1102,62,0	1/1:7,0:7:12.89:45,13,0	0/0:17,0:13:36:0,36,437	0/0:16,0:14:23.17:0,23,397	1/1:8,28:36:99:1426,108,0	1/1:0,25:25:63.21:899,63,0	1/1:0,11:11:18.06:257,18,0	1/1:20,0:20:51.88:367,52,0	1/1:3,13:15:39.12:556,39,0	1/1:0,39:39:99:1498,110,0	1/1:1,27:28:78.03:1012,78,0	1/1:2,14:16:48.15:663,48,0	1/1:5,19:24:68.85:913,69,0	1/1:4,12:15:45.14:624,45,0	1/1:0,25:25:69.23:985,69,0	1/1:1,25:26:71.27:986,71,0	0/1:20,1:21:9.34:45,0,9	0/1:16,0:16:19.36:19,0,39	1/1:18,0:17:7.34:172,7,0	1/1:29,1:30:22.76:175,23,0	1/1:9,2:11:17.14:118,17,0	1/1:9,19:28:84.11:1093,84,0	1/1:0,23:23:38.92:554,39,0	1/1:1,9:10:30.06:405,30,0	1/1:0,24:24:54.18:768,54,0	1/1:19,0:19:56.71:429,57,0	1/1:30,0:30:80.90:603,81,0	0/1:11,0:11:31.39:110,0,31
chr10	23203763	.	AC	A	9675.58	PASS	AB=0.788;AC=50;AF=0.893;AN=56;BaseQRankSum=-0.493;DP=591;FS=14.282;HRun=2;HaplotypeScore=129.1822;InbreedingCoeff=0.6197;MQ=64.80;MQ0=1;MQRankSum=-1.441;QD=17.28;ReadPosRankSum=6.528;VQSLOD=3.6111;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:32,0:32:62.82:484,63,0	1/1:0,7:7:17.97:211,18,0	0/0:16,0:13:33.03:0,33,364	0/0:14,0:13:26.83:0,27,297	1/1:36,0:36:99:645,105,0	1/1:25,0:25:61.41:352,61,0	1/1:11,0:11:17.55:101,18,0	1/1:20,0:20:49.26:310,49,0	1/1:15,0:14:37.97:217,38,0	1/1:39,0:39:99:674,107,0	1/1:27,1:28:75.98:438,76,0	1/1:16,0:16:46.66:272,47,0	1/1:25,0:25:67.49:419,67,0	1/1:16,0:15:43.92:260,44,0	1/1:25,0:25:67.24:386,67,0	1/1:26,0:26:70.09:420,70,0	1/1:4,17:21:9.77:504,10,0	0/1:4,11:15:29.61:275,0,30	1/1:2,16:17:48.11:555,48,0	1/1:2,28:30:74.90:841,75,0	1/1:2,9:11:23.91:266,24,0	1/1:28,0:28:82.09:506,82,0	1/1:23,0:23:37.95:218,38,0	1/1:10,0:10:29.27:170,29,0	1/1:24,0:24:52.51:299,53,0	1/1:19,0:19:55.34:327,55,0	1/1:29,0:29:79.88:447,80,0	0/1:11,0:11:10.35:77,0,10
chr10	23203853	.	T	TAA	16277.98	PASS	AB=0.935;AC=37;AF=0.661;AN=56;BaseQRankSum=9.202;DP=687;FS=0.329;HRun=8;HaplotypeScore=119.1882;InbreedingCoeff=0.9196;MQ=66.31;MQ0=0;MQRankSum=-1.467;QD=32.95;ReadPosRankSum=0.573;VQSLOD=4.0563;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:31:54.90:189,55,0	0/0:12,0:12:30.06:0,30,325	0/0:14,0:13:21.03:0,21,224	0/0:17,0:15:24.01:0,24,258	1/1:3,41:45:99:1767,120,0	1/1:1,23:26:65.66:962,66,0	1/1:1,6:7:18.06:286,18,0	1/1:10,23:33:69.24:1095,69,0	1/1:0,23:25:51.17:791,51,0	1/1:5,22:26:69.23:1075,69,0	1/1:1,19:20:57.19:905,57,0	1/1:3,18:21:54.18:857,54,0	1/1:5,19:24:57.19:902,57,0	1/1:5,26:32:74.74:1148,75,0	0/0:25,0:25:69.17:0,69,759	0/1:27,2:29:17.05:17,0,724	0/0:30,0:30:78.20:0,78,869	0/0:24,0:25:59.48:0,59,623	0/0:19,0:17:45.11:0,45,493	0/0:30,0:30:78.19:0,78,870	0/0:21,0:21:54.12:0,54,602	1/1:3,28:31:84.20:1269,84,0	1/1:7,16:24:57.18:867,57,0	1/1:1,14:16:39.09:591,39,0	1/1:6,19:25:66.23:1045,66,0	1/1:4,18:23:56.67:843,57,0	1/1:3,33:37:78.26:1220,78,0	1/1:2,13:17:30.07:449,30,0
chr10	23205393	.	C	CAAT	28649.63	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=6.046;DP=749;FS=4.781;HRun=0;HaplotypeScore=112.5027;InbreedingCoeff=0.9977;MQ=55.92;MQ0=3;MQRankSum=-1.034;QD=53.45;ReadPosRankSum=2.254;VQSLOD=7.3095;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,53:57:99:2863,123,0	0/0:6,0:6:18.06:0,18,317	0/0:31,0:23:54.01:0,54,938	0/0:31,0:28:75.08:0,75,1167	1/1:0,29:29:69.13:1624,69,0	1/1:1,24:28:63.22:1468,63,0	1/1:7,10:17:41.82:763,42,0	1/1:2,37:40:99:2395,114,0	1/1:2,18:20:36.12:849,36,0	1/1:2,33:37:96.13:2120,96,0	1/1:1,30:32:95.95:1938,96,0	1/1:1,24:26:57.20:1331,57,0	1/1:3,15:21:45.06:990,45,0	1/1:1,39:40:90.31:2123,90,0	1/1:1,21:22:51.18:1202,51,0	1/1:0,30:30:75.24:1766,75,0	0/0:31,0:31:90.27:0,90,1526	0/0:26,0:26:66.16:0,66,1120	0/0:27,0:27:75.19:0,75,1223	0/0:30,0:30:87.28:0,87,1504	0/0:30,0:30:84.20:0,84,1331	1/1:1,12:13:27.09:638,27,0	1/1:1,18:20:48.16:1127,48,0	1/1:2,15:18:33.11:775,33,0	1/1:1,19:20:51.18:1186,51,0	1/1:3,27:31:84.01:1828,84,0	1/1:3,19:22:51.18:1170,51,0	1/1:0,12:12:21.07:495,21,0
chr10	23205700	.	AAAG	A	9398.98	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=10.737;DP=539;FS=4.067;HRun=0;HaplotypeScore=90.8437;InbreedingCoeff=0.9879;MQ=64.17;MQ0=0;MQRankSum=-0.851;QD=35.74;ReadPosRankSum=3.712;VQSLOD=5.7147;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:51.16:0,51,991	0/0:11,0:11:30.10:0,30,615	0/0:18,0:16:20.52:0,21,396	0/0:16,0:11:21.54:0,22,367	1/1:0,31:31:90.24:1318,90,0	1/1:3,18:21:51.17:758,51,0	1/1:2,12:14:33.11:496,33,0	0/0:39,0:39:99:0,102,1816	1/1:4,13:17:30.10:451,30,0	1/1:3,15:18:45.12:628,45,0	1/1:4,22:26:66.09:917,66,0	1/1:2,24:26:60.20:882,60,0	1/1:0,14:14:39.13:586,39,0	1/1:1,17:18:45.15:676,45,0	0/0:19,0:19:51.16:0,51,1030	0/0:17,0:17:45.11:0,45,829	0/0:24,0:24:69.22:0,69,1391	0/0:12,0:12:33.11:0,33,690	0/0:15,0:15:33.11:0,33,681	0/0:27,0:27:72.21:0,72,1371	0/0:10,0:10:30.09:0,30,590	1/1:1,17:18:50.99:665,51,0	1/1:3,25:28:63.17:910,63,0	1/1:1,8:9:15.05:225,15,0	1/1:0,23:23:60.20:886,60,0	0/0:19,1:20:9.05:0,9,970	0/0:24,0:23:69.24:0,69,1413	0/0:7,0:7:21.07:0,21,440
chr10	23205987	.	A	AT	13988.34	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-13.741;DP=579;FS=6.236;HRun=7;HaplotypeScore=50.0315;InbreedingCoeff=0.9904;MQ=77.56;MQ0=0;MQRankSum=-0.617;QD=31.65;ReadPosRankSum=3.031;VQSLOD=4.8139;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,13:14:13.15:442,13,0	0/0:15,0:15:30.04:0,30,290	0/0:13,0:13:27.64:0,28,229	0/0:12,0:12:17.24:0,17,147	1/1:4,35:40:99:1194,102,0	1/1:2,28:30:72.22:870,72,0	1/1:2,15:17:42.13:507,42,0	1/1:4,30:34:90.28:1087,90,0	1/1:1,19:21:57.16:676,57,0	1/1:2,20:22:60.17:715,60,0	1/1:1,21:22:60.14:708,60,0	1/1:2,20:22:57.17:688,57,0	1/1:2,16:18:45.14:543,45,0	1/1:2,15:17:45.14:544,45,0	1/1:1,23:24:66.20:797,66,0	1/1:2,17:19:48.15:580,48,0	0/0:14,0:14:39.06:0,39,377	0/0:9,0:9:24.03:0,24,232	0/0:21,0:21:53.98:0,54,496	0/0:35,0:35:99:0,99,955	0/0:18,0:18:39.04:0,39,370	1/1:2,17:19:48.15:580,48,0	1/1:1,22:23:63.19:759,63,0	1/1:2,5:7:15.05:181,15,0	1/1:1,30:31:87.27:1051,87,0	1/1:2,22:24:66.20:797,66,0	1/1:1,29:31:84.18:1014,84,0	1/1:0,7:7:21.06:254,21,0
chr10	23206303	.	CA	C	7874.75	PASS	AB=0.875;AC=31;AF=0.554;AN=56;BaseQRankSum=11.388;DP=574;FS=5.545;HRun=9;HaplotypeScore=57.2770;InbreedingCoeff=0.9093;MQ=80.40;MQ0=0;MQRankSum=-1.026;QD=23.30;ReadPosRankSum=2.803;VQSLOD=5.8615;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:72.19:0,72,818	0/1:6,1:7:9.41:9,0,155	0/0:21,0:20:45.12:0,45,497	0/0:8,0:8:12.92:0,13,137	1/1:2,41:43:99:1043,114,0	1/1:0,19:19:57.03:522,57,0	1/1:2,7:9:21:192,21,0	0/0:28,1:29:34.81:0,35,788	1/1:2,14:16:39.02:357,39,0	1/1:0,29:29:87.05:796,87,0	1/1:2,20:23:62.06:555,62,0	1/1:1,14:15:42.02:384,42,0	1/1:1,25:26:66.04:604,66,0	1/1:2,19:21:51.02:467,51,0	1/1:4,23:28:68.07:610,68,0	1/1:3,17:20:48.02:439,48,0	0/0:11,0:11:30.09:0,30,346	0/0:7,0:7:15.04:0,15,173	0/0:21,1:22:29.76:0,30,596	0/0:34,0:34:99:0,102,1169	0/0:6,0:6:18.05:0,18,208	1/1:2,13:15:36.01:330,36,0	1/1:1,22:23:63.03:577,63,0	1/1:1,13:14:36.02:330,36,0	1/1:3,27:30:72.04:659,72,0	0/0:26,2:27:14.27:0,14,669	0/0:34,0:34:99:0,99,1128	0/0:10,1:11:5.64:0,6,319
chr10	23207551	.	A	ATT	7817.84	PASS	AB=1.000;AC=41;AF=0.732;AN=56;BaseQRankSum=1.855;DP=552;FS=3.204;HRun=11;HaplotypeScore=89.2983;InbreedingCoeff=0.8701;MQ=74.31;MQ0=0;MQRankSum=-1.300;QD=18.57;ReadPosRankSum=-0.871;VQSLOD=4.0394;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,9:11:21.07:304,21,0	1/1:2,6:8:18.06:255,18,0	0/0:15,0:15:18.22:0,18,116	0/1:18,0:15:38.19:38,0,138	1/1:10,0:43:99:934,105,0	1/1:0,0:9:15.02:143,15,0	1/1:7,0:10:30.01:310,30,0	0/0:24,0:26:32.51:0,33,298	1/1:5,1:21:14.99:135,15,0	1/1:8,2:27:59.64:578,60,0	1/1:7,0:31:62.83:561,63,0	1/1:6,0:13:7.26:61,7,0	1/1:8,0:29:31.29:289,31,0	1/1:4,0:18:15.02:143,15,0	0/0:18,0:19:47.75:0,48,448	0/0:13,0:14:20.94:0,21,253	1/1:2,15:19:23.05:278,23,0	1/1:7,15:23:39.13:550,39,0	1/1:4,15:21:53.27:641,53,0	1/1:15,20:37:98.73:1289,99,0	1/1:5,8:15:34.32:431,34,0	1/1:8,1:17:20.95:183,21,0	1/1:2,0:20:27.33:268,27,0	1/1:2,0:11:23.98:216,24,0	1/1:4,0:14:21.04:209,21,0	0/0:21,0:21:53.72:0,54,523	0/0:31,0:32:89.13:0,89,854	0/0:4,0:4:9.01:0,9,87
chr10	23208620	.	GT	G	149.02	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=4.030;DP=315;FS=10.853;HRun=6;HaplotypeScore=33.6616;InbreedingCoeff=0.8403;MQ=84.90;MQ0=0;MQRankSum=-1.434;QD=16.56;ReadPosRankSum=0.018;VQSLOD=1.7285;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:30.08:0,30,380	0/0:4,0:4:12.03:0,12,143	0/0:6,0:6:15.03:0,15,174	0/0:15,0:15:21.34:0,21,247	0/0:11,0:11:30.04:0,30,360	0/0:17,0:17:39.13:0,39,513	0/0:2,0:2:6.02:0,6,79	0/0:19,0:19:45.14:0,45,568	0/0:5,0:5:15.05:0,15,197	0/0:22,0:22:63.19:0,63,813	0/0:14,0:14:39.08:0,39,485	0/0:7,0:7:18.06:0,18,236	0/0:14,0:14:42.13:0,42,542	0/0:10,0:10:30.10:0,30,395	1/1:0,7:7:18.05:193,18,0	1/1:0,2:2:6.02:64,6,0	0/0:15,0:15:42.12:0,42,538	0/0:10,0:10:27.07:0,27,338	0/0:16,0:16:48.10:0,48,611	0/0:18,0:18:51.16:0,51,657	0/0:8,0:8:21.07:0,21,276	0/0:5,0:5:15.05:0,15,197	0/0:13,0:13:30.08:0,30,376	0/0:6,0:6:17.94:0,18,182	0/0:16,0:16:39.12:0,39,500	0/0:16,0:16:48.16:0,48,631	0/0:15,0:15:45.13:0,45,577	0/0:12,0:12:36.12:0,36,474
chr10	23208693	.	AAAT	A	4452.38	PASS	AB=0.833;AC=40;AF=0.741;AN=54;BaseQRankSum=4.710;DP=232;FS=6.429;HRun=0;HaplotypeScore=38.6510;InbreedingCoeff=0.6527;MQ=66.71;MQ0=1;MQRankSum=1.001;QD=25.89;ReadPosRankSum=1.055;VQSLOD=3.8550;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,7:9:21.07:303,21,0	0/0:2,0:2:6.02:0,6,123	./.	0/1:5,0:4:8.04:8,0,105	1/1:2,10:12:24.08:347,24,0	1/1:1,12:13:24.08:347,24,0	1/1:2,1:3:3.01:43,3,0	1/1:13,16:29:45.14:629,45,0	1/1:2,3:5:6.02:87,6,0	1/1:3,10:13:27.07:370,27,0	1/1:2,7:9:15.05:216,15,0	1/1:1,5:6:12.04:174,12,0	1/1:2,4:6:12.04:174,12,0	1/1:2,1:3:3.01:43,3,0	1/1:1,3:4:9.03:130,9,0	1/1:0,8:8:24.08:347,24,0	0/0:10,0:10:27.09:0,27,553	0/0:14,0:14:42.14:0,42,859	0/0:17,0:17:42.13:0,42,810	0/0:5,0:5:9.03:0,9,184	0/0:5,0:5:15.05:0,15,307	1/1:1,2:3:6.02:87,6,0	0/1:2,2:4:7.99:38,0,8	1/1:1,2:3:2.99:43,3,0	1/1:2,6:8:15.05:217,15,0	1/1:1,5:6:15.03:197,15,0	1/1:3,9:12:24.08:347,24,0	1/1:3,8:11:21.07:304,21,0
chr10	23209592	.	TA	T	9926.88	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=17.822;DP=552;FS=0.689;HRun=1;HaplotypeScore=161.2357;InbreedingCoeff=0.9796;MQ=84.39;MQ0=0;MQRankSum=-11.174;QD=25.39;ReadPosRankSum=5.697;VQSLOD=4.6916;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,22:28:38.02:616,38,0	0/0:11,0:11:33.11:0,33,527	0/0:17,0:17:49.98:0,50,771	0/0:24,0:24:65.87:0,66,898	1/1:4,15:19:19.37:361,19,0	1/1:1,11:12:26.11:330,26,0	1/1:0,13:13:38.81:293,39,0	1/1:1,25:26:74.37:653,74,0	1/1:2,11:13:33.52:341,34,0	1/1:0,16:16:48.03:517,48,0	1/1:1,17:18:53.95:525,54,0	1/1:1,17:18:53.05:492,53,0	1/1:4,22:26:54.89:652,55,0	1/1:4,16:20:52.74:520,53,0	1/1:2,15:17:7.36:370,7,0	1/1:3,28:31:72.80:864,73,0	0/0:27,0:27:81.25:0,81,1270	0/0:8,0:8:21.05:0,21,311	0/0:22,0:22:66.23:0,66,1055	0/0:22,0:22:66.23:0,66,1055	0/0:30,0:30:90.29:0,90,1416	1/1:1,24:25:70.74:662,71,0	1/1:2,14:16:14.85:289,15,0	1/1:2,12:14:17.79:283,18,0	1/1:3,17:20:40.41:540,40,0	1/1:4,15:19:33.34:524,33,0	1/1:1,31:32:94.77:887,95,0	1/1:2,6:8:20.78:207,21,0
chr10	23209595	.	G	GCATT	26536.57	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=15.042;DP=580;FS=1.082;HRun=0;HaplotypeScore=145.9830;InbreedingCoeff=0.9989;MQ=80.54;MQ0=0;MQRankSum=-10.691;QD=63.94;ReadPosRankSum=2.930;VQSLOD=6.9052;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,22:32:81.17:1751,81,0	0/0:12,0:12:36.10:0,36,665	0/0:17,0:17:45.15:0,45,853	0/0:21,0:21:59.52:0,60,927	1/1:2,15:17:45.11:898,45,0	1/1:3,11:14:39.13:920,39,0	1/1:6,13:19:57.19:1124,57,0	1/1:6,23:29:87.28:1896,87,0	1/1:2,11:13:39.13:901,39,0	1/1:2,16:18:54.19:1303,54,0	1/1:2,17:19:57.14:1152,57,0	1/1:2,17:19:57.20:1267,57,0	1/1:4,22:26:75.21:1622,75,0	1/1:1,15:18:51.17:1181,51,0	1/1:6,13:19:57.16:1132,57,0	1/1:5,28:33:99:2300,99,0	0/0:27,0:27:81.26:0,81,1580	0/0:9,0:9:24.07:0,24,430	0/0:26,0:26:72.22:0,72,1342	0/0:22,0:22:66.23:0,66,1318	0/0:31,0:31:93.31:0,93,1811	1/1:1,24:25:75.26:1751,75,0	1/1:5,12:17:48.12:937,48,0	1/1:2,12:14:39.13:844,39,0	1/1:4,17:21:63.21:1381,63,0	1/1:5,15:20:60.21:1428,60,0	1/1:3,31:34:99:2286,99,0	1/1:2,6:8:21.07:463,21,0
chr10	23210662	.	T	TG	20425.32	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-12.455;DP=667;FS=3.728;HRun=2;HaplotypeScore=67.7676;InbreedingCoeff=0.9936;MQ=75.69;MQ0=0;MQRankSum=-3.967;QD=39.74;ReadPosRankSum=1.752;VQSLOD=5.4875;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,29:29:81.27:1213,81,0	0/0:19,0:19:51.17:0,51,662	0/0:11,0:11:18.97:0,19,208	0/0:19,0:19:42.14:0,42,539	1/1:1,29:30:81.27:1213,81,0	1/1:1,24:25:63.17:918,63,0	1/1:0,22:22:63.21:944,63,0	1/1:1,21:22:63.20:922,63,0	1/1:1,23:24:69.23:1034,69,0	1/1:1,31:32:93.10:1358,93,0	1/1:0,26:26:69.23:1033,69,0	1/1:1,21:22:60.20:899,60,0	1/1:2,38:40:99:1518,102,0	1/1:0,39:39:99:1611,108,0	1/1:2,24:25:69.23:1034,69,0	1/1:0,22:22:63.21:944,63,0	0/0:22,0:22:57.18:0,57,740	0/0:10,0:10:30.08:0,30,373	0/0:22,0:22:51.14:0,51,634	0/0:27,0:27:72.22:0,72,914	0/0:23,0:23:63.20:0,63,818	1/1:1,17:19:51.17:756,51,0	1/1:0,16:16:32.98:493,33,0	1/1:1,27:28:81.27:1214,81,0	1/1:0,25:25:54.18:809,54,0	1/1:1,26:27:72.24:1076,72,0	1/1:1,33:34:84.28:1256,84,0	1/1:0,6:6:12.04:180,12,0
chr10	23210919	.	T	TTGG	2339.02	PASS	AB=0.993;AC=20;AF=0.357;AN=56;BaseQRankSum=-5.380;DP=699;FS=36.532;HRun=0;HaplotypeScore=409.1024;InbreedingCoeff=-0.3635;MQ=34.69;MQ0=4;MQRankSum=-0.435;QD=4.63;ReadPosRankSum=-2.787;VQSLOD=0.6949;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:43,4:46:74.30:430,74,0	0/0:12,0:12:32.66:0,33,299	0/1:16,0:9:15.82:67,0,16	0/0:19,0:9:4.54:0,5,36	0/1:21,0:20:17.18:17,0,38	0/1:24,0:23:84.64:103,0,85	0/1:28,0:28:90.25:132,0,90	0/1:30,0:28:53.78:54,0,129	0/1:37,0:37:99:120,0,166	0/1:33,0:32:99:197,0,167	0/0:13,1:13:8.79:0,9,51	0/1:38,0:38:99:173,0,118	0/1:31,1:32:77.73:154,0,78	0/1:48,0:48:99:162,0,206	0/0:31,0:31:40.19:0,40,272	0/0:43,0:43:66.25:0,66,374	0/0:18,0:18:32.59:0,33,244	0/1:8,0:8:4.55:5,0,106	0/1:14,0:14:99:124,0,152	0/0:23,0:23:47.31:0,47,496	0/0:15,0:15:17.42:0,17,123	0/1:18,1:19:10.49:10,0,114	0/0:19,0:17:4.62:0,5,86	0/1:20,0:20:0.98:108,0,1	0/1:20,0:20:23.33:23,0,44	0/1:29,0:28:35.06:297,0,35	0/1:33,0:33:48.76:288,0,49	0/1:7,0:7:24.05:35,0,24
chr10	23210925	.	A	ATGG	7183.27	PASS	AB=1.000;AC=47;AF=0.839;AN=56;BaseQRankSum=1.649;DP=680;FS=0.000;HRun=0;HaplotypeScore=383.4416;InbreedingCoeff=0.3321;MQ=37.30;MQ0=1;MQRankSum=-1.261;QD=11.03;ReadPosRankSum=1.298;VQSLOD=3.4659;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:39,4:42:72.34:533,72,0	0/1:12,0:12:6.04:101,0,6	0/0:14,0:10:24.01:0,24,257	0/0:15,0:9:24.08:0,24,345	1/1:21,0:21:9.29:70,9,0	1/1:23,0:22:41.36:292,41,0	1/1:30,0:30:52.78:379,53,0	1/1:33,0:31:64.10:442,64,0	1/1:38,0:38:64.82:394,65,0	1/1:32,0:31:74.58:581,75,0	1/1:15,0:15:11.51:72,12,0	1/1:36,0:36:76.04:522,76,0	1/1:30,0:30:61.16:425,61,0	1/1:46,0:46:84.79:535,85,0	1/1:31,0:31:27.15:238,27,0	1/1:41,0:41:66.54:428,67,0	0/1:18,0:18:14.07:152,0,14	0/1:8,0:8:17.89:43,0,18	0/1:16,0:16:7.55:106,0,8	0/1:24,0:24:21.70:204,0,22	1/1:16,0:16:8.99:113,9,0	1/1:19,0:19:37.94:226,38,0	1/1:18,0:17:29.16:180,29,0	1/1:19,0:19:8.19:43,8,0	1/1:20,1:20:27.84:156,28,0	1/1:25,0:24:50.37:449,50,0	1/1:29,0:29:52.13:409,52,0	1/1:7,0:7:12.73:89,13,0
chr10	23210945	.	A	AT	14864.60	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=1.511;DP=482;FS=33.247;HRun=0;HaplotypeScore=211.9905;InbreedingCoeff=0.9689;MQ=57.79;MQ0=0;MQRankSum=-5.716;QD=42.23;ReadPosRankSum=0.906;VQSLOD=0.3670;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,19:20:51.17:812,51,0	0/0:14,0:14:42.13:0,42,568	0/0:15,0:14:39.13:0,39,525	0/0:15,0:14:42.14:0,42,586	1/1:3,17:20:42.14:640,42,0	1/1:2,11:13:36.12:570,36,0	1/1:0,22:22:63.21:1003,63,0	1/1:2,38:40:99:1689,108,0	1/1:0,20:20:54.18:859,54,0	1/1:0,22:22:60.20:948,60,0	1/1:0,12:12:33.11:512,33,0	1/1:0,19:19:54.18:859,54,0	1/1:0,21:21:57.19:908,57,0	1/1:2,27:29:81.28:1285,81,0	1/1:0,10:10:27.09:430,27,0	1/1:1,17:18:48.16:764,48,0	0/0:15,0:15:41.98:0,42,517	0/0:8,0:8:21.07:0,21,293	0/0:20,0:20:54.17:0,54,733	0/0:23,0:23:60.19:0,60,822	0/0:20,0:20:48.09:0,48,645	1/1:0,17:17:48.16:765,48,0	1/1:2,14:15:45.07:672,45,0	1/1:1,11:12:18.30:257,18,0	1/1:0,15:15:42.14:669,42,0	1/1:1,13:14:42.13:649,42,0	1/1:1,10:11:33.11:526,33,0	1/1:0,1:1:3.01:48,3,0
chr10	23211124	.	G	GCA	3491.76	PASS	AB=0.500;AC=37;AF=0.685;AN=54;BaseQRankSum=4.467;DP=290;FS=20.446;HRun=0;HaplotypeScore=117.1153;InbreedingCoeff=0.8002;MQ=57.56;MQ0=3;MQRankSum=-7.180;QD=26.06;ReadPosRankSum=3.700;VQSLOD=3.3830;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,9:9:15.05:248,15,0	0/0:6,0:6:15.05:0,15,193	0/0:43,0:30:53.77:0,54,690	0/0:35,0:23:53.45:0,53,609	0/1:0,6:6:0.01:0,0,0	1/1:1,7:8:17.24:262,17,0	1/1:1,8:9:9.03:152,9,0	1/1:1,8:9:27.09:437,27,0	1/1:1,8:10:14.79:214,15,0	1/1:2,3:5:9.03:152,9,0	1/1:0,5:5:5.66:101,6,0	1/1:0,8:7:18.06:303,18,0	1/1:0,1:1:3.01:51,3,0	1/1:0,9:8:12.04:202,12,0	1/1:2,5:6:9.03:151,9,0	1/1:0,7:7:18.06:302,18,0	0/0:18,0:18:41.81:0,42,517	0/0:4,0:4:12.02:0,12,140	0/0:11,0:11:27.08:0,27,334	0/0:10,0:10:27.08:0,27,347	0/0:26,0:26:29.81:0,30,382	1/1:2,4:6:3.01:51,3,0	1/1:1,6:7:8.52:110,9,0	1/1:0,9:5:6.02:101,6,0	1/1:2,4:6:6.02:101,6,0	1/1:0,8:8:24.08:404,24,0	1/1:0,3:3:9.03:151,9,0	./.
chr10	23211149	.	CCACACACACACACACACACACA	C	8057.14	PASS	AC=36;AF=0.692;AN=52;BaseQRankSum=8.729;DP=337;FS=31.061;HRun=0;HaplotypeScore=184.1819;InbreedingCoeff=0.7464;MQ=37.52;MQ0=16;MQRankSum=-5.374;QD=52.32;ReadPosRankSum=2.261;VQSLOD=2.6083;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,5:8:10.95:812,11,0	0/0:9,0:9:22.84:0,23,1295	0/0:47,0:16:39.13:0,39,1409	0/0:43,0:18:45.15:0,45,1729	1/1:2,4:6:3.48:105,3,0	1/1:4,5:8:14.70:664,15,0	1/1:11,2:13:6.01:135,6,0	1/1:5,7:11:21.07:539,21,0	1/1:2,7:9:17.79:894,18,0	1/1:9,0:8:12.04:508,12,0	1/1:6,2:8:3.01:104,3,0	1/1:1,8:8:15.05:849,15,0	1/1:2,1:2:2:175,2,0	1/1:3,5:6:6.02:357,6,0	1/1:7,4:10:7.46:271,7,0	1/1:7,4:10:18.06:891,18,0	0/0:21,0:21:44.14:0,44,3140	0/0:6,0:6:12.04:0,12,767	0/0:7,0:6:18.06:0,18,1252	0/0:16,0:16:21.11:0,21,1648	0/0:28,0:27:34.04:0,34,2596	1/1:3,2:5:6.01:131,6,0	1/1:4,3:7:2.87:105,3,0	1/1:8,4:5:1.86:176,2,0	./.	1/1:4,5:9:21.06:1003,21,0	1/1:0,2:2:6.02:339,6,0	./.
chr10	23211152	.	CACACACACACACACACACACACAGAGAGAGAG	C	8201.98	PASS	AC=36;AF=0.692;AN=52;BaseQRankSum=7.079;DP=331;FS=34.423;HRun=0;HaplotypeScore=221.3691;InbreedingCoeff=0.7798;MQ=35.50;MQ0=18;MQRankSum=-5.248;QD=53.96;ReadPosRankSum=1.148;VQSLOD=2.5052;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:8:13.56:730,14,0	0/0:9,0:9:22.71:0,23,1342	0/0:44,0:14:39.13:0,39,1424	0/0:42,0:17:45.15:0,45,1729	1/1:6,0:6:3.48:105,3,0	1/1:8,0:7:15.41:665,15,0	1/1:14,0:13:12.24:150,12,0	1/1:11,0:10:21.07:539,21,0	1/1:9,0:9:17.90:874,18,0	1/1:10,0:8:12.04:390,12,0	1/1:8,0:8:3.95:105,4,0	1/1:9,0:8:15.05:830,15,0	1/1:3,0:2:3.01:178,3,0	1/1:8,0:6:6.02:357,6,0	1/1:10,1:10:7.76:313,8,0	1/1:8,3:10:21.54:1232,22,0	0/0:21,0:21:44.79:0,45,3325	0/0:6,0:6:12.01:0,12,779	0/0:8,0:7:18.06:0,18,1263	0/0:16,0:16:21.82:0,22,1673	0/0:29,0:27:34.47:0,34,2659	1/1:5,0:5:7.25:106,7,0	1/1:6,0:6:3:105,3,0	1/1:11,0:4:3.39:179,3,0	./.	1/1:9,0:9:21.06:1006,21,0	1/1:2,0:2:6.02:338,6,0	./.
chr10	23211157	.	A	ATG	188.43	PASS	AB=0.985;AC=19;AF=0.365;AN=52;BaseQRankSum=2.574;DP=297;FS=22.074;HRun=0;HaplotypeScore=131.9860;InbreedingCoeff=0.3565;MQ=32.23;MQ0=18;MQRankSum=-3.130;QD=2.27;ReadPosRankSum=-1.764;VQSLOD=0.3183;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:11,1:9:29.52:30,0,56	0/0:9,0:9:20.24:0,20,227	0/0:36,0:9:24.08:0,24,350	0/0:35,0:11:27.01:0,27,384	1/1:5,0:5:2.66:15,3,0	0/1:8,0:7:16.76:17,0,30	1/1:8,1:8:2.88:38,3,0	1/1:8,0:7:5.96:73,6,0	0/1:8,0:8:13.15:13,0,36	1/1:7,0:5:11.77:74,12,0	1/1:5,0:5:2.77:15,3,0	0/0:9,0:8:14.10:0,14,72	0/0:2,1:2:2.59:0,3,12	0/0:6,0:5:5.49:0,5,24	0/1:11,0:10:5.92:29,0,6	0/0:11,0:10:15.20:0,15,78	0/0:22,0:23:44.59:0,45,463	0/0:7,0:7:8.89:0,9,65	0/0:8,0:7:17.26:0,17,190	0/0:16,0:16:20.01:0,20,181	0/0:31,0:28:32.68:0,33,374	1/1:3,0:3:2.84:16,3,0	1/1:4,1:5:2.80:14,3,0	0/0:9,0:2:2.80:0,3,13	./.	0/0:6,0:6:14.77:0,15,64	0/1:2,0:2:7.37:14,0,7	./.
chr10	23211159	.	A	ATGCT	862.56	PASS	AB=0.983;AC=22;AF=0.423;AN=52;BaseQRankSum=3.645;DP=299;FS=14.427;HRun=0;HaplotypeScore=138.1954;InbreedingCoeff=0.2825;MQ=30.87;MQ0=18;MQRankSum=-2.888;QD=8.21;ReadPosRankSum=-0.754;VQSLOD=2.1581;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:14,0:11:87.21:98,0,87	0/0:9,0:9:20.61:0,21,341	0/0:37,0:9:24.04:0,24,389	0/0:32,0:8:18.06:0,18,352	1/1:5,0:5:2.55:43,3,0	0/1:8,1:8:46.15:75,0,46	1/1:8,1:8:2.75:56,3,0	1/1:8,0:7:5.39:159,5,0	0/1:8,0:8:43.04:86,0,43	1/1:5,2:5:12.04:234,12,0	1/1:4,1:5:2.80:41,3,0	0/0:9,0:8:13.28:0,13,77	0/0:3,0:2:2.43:0,2,12	0/0:6,0:5:5.49:0,5,24	1/1:11,0:10:5.73:63,6,0	0/1:12,0:10:33.78:34,0,61	0/0:23,0:23:45.15:0,45,784	0/0:7,0:7:10.85:0,11,154	0/0:8,0:7:14.84:0,15,230	0/0:16,0:16:21.05:0,21,335	0/0:30,0:27:32.48:0,32,607	1/1:3,0:3:3.01:44,3,0	1/1:6,0:6:3.48:43,3,0	0/0:9,1:3:2.01:0,2,11	./.	0/1:6,0:6:9.80:10,0,32	0/1:2,0:2:5.86:40,0,6	./.
chr10	23211161	.	A	ATGCT	1382.22	PASS	AB=0.888;AC=21;AF=0.404;AN=52;BaseQRankSum=3.525;DP=294;FS=16.814;HRun=0;HaplotypeScore=136.3788;InbreedingCoeff=0.2101;MQ=31.09;MQ0=18;MQRankSum=-3.353;QD=13.04;ReadPosRankSum=0.025;VQSLOD=2.3530;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:13,1:11:99:155,0,100	0/0:9,0:9:20.65:0,21,344	0/0:32,0:7:15.05:0,15,256	0/0:31,0:8:18.06:0,18,373	1/1:4,1:5:2.55:81,3,0	0/1:8,1:8:54.53:150,0,55	1/1:5,4:8:2.75:53,3,0	0/1:7,1:7:1.45:142,0,1	0/1:7,1:8:69.11:174,0,69	1/1:3,4:5:12.04:338,12,0	1/1:3,2:5:2.80:80,3,0	0/0:9,0:8:9.29:0,9,96	0/0:3,0:2:2.63:0,3,25	0/0:6,0:5:5.99:0,6,50	1/1:10,0:11:2.77:78,3,0	0/1:8,2:10:37.42:79,0,37	0/0:23,0:23:45.11:0,45,770	0/0:7,0:7:11.78:0,12,158	0/0:8,0:7:17.95:0,18,255	0/0:16,0:16:21.05:0,21,335	0/0:29,0:26:32.48:0,32,607	1/1:2,1:3:3.01:83,3,0	1/1:5,1:6:3.48:82,3,0	0/0:9,1:3:2.21:0,2,24	./.	0/1:5,1:6:14.84:15,0,78	0/1:2,0:2:18.92:32,0,19	./.
chr10	23211171	.	A	AC	1001.10	PASS	AB=0.900;AC=24;AF=0.462;AN=52;BaseQRankSum=1.309;DP=277;FS=27.924;HRun=1;HaplotypeScore=129.1659;InbreedingCoeff=0.4621;MQ=31.42;MQ0=16;MQRankSum=-2.191;QD=9.63;ReadPosRankSum=-1.679;VQSLOD=-0.3381;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:14,1:12:2.10:105,0,2	0/0:8,0:8:17.77:0,18,200	0/0:18,0:4:6.02:0,6,78	0/0:20,0:4:5.85:0,6,77	1/1:4,1:5:2.62:39,3,0	0/1:8,1:8:1.89:68,0,2	1/1:5,4:8:2.78:44,3,0	1/1:10,1:10:30.10:394,30,0	0/1:7,1:8:1.23:65,0,1	1/1:3,4:5:12.04:160,12,0	1/1:3,2:5:3.85:39,4,0	0/0:8,0:8:8.41:0,8,34	1/1:4,0:3:0.36:8,0,0	0/0:6,0:5:3.37:0,3,9	1/1:12,0:11:4.72:78,5,0	0/0:10,2:10:6:0,6,24	0/0:25,0:25:38.57:0,39,402	0/0:11,0:10:15.01:0,15,147	0/0:7,0:6:14.97:0,15,141	0/0:16,0:16:21.40:0,21,178	0/0:27,0:24:29.76:0,30,308	1/1:2,1:3:2.97:40,3,0	1/1:5,1:6:2.67:37,3,0	0/0:9,1:3:1.44:0,1,4	./.	0/1:6,1:7:9.05:33,0,9	1/1:3,0:3:1.95:52,2,0	./.
chr10	23211174	.	CAGAGAGAGAGAGAGAG	C	1227.24	PASS	AB=0.898;AC=33;AF=0.688;AN=48;BaseQRankSum=1.966;DP=274;FS=1.348;HRun=0;HaplotypeScore=164.9830;InbreedingCoeff=0.1945;MQ=31.98;MQ0=16;MQRankSum=-1.246;QD=5.96;ReadPosRankSum=2.206;VQSLOD=2.8409;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:12:8.79:57,9,0	1/1:6,0:7:1.90:198,2,0	./.	./.	1/1:5,0:5:3.48:41,3,0	1/1:9,0:8:6.13:55,6,0	1/1:9,0:8:1.25:4,1,0	0/0:11,0:10:21.04:0,21,289	0/1:8,0:8:2.03:34,0,2	0/0:7,0:5:3.67:0,4,20	1/1:6,0:5:3:25,3,0	0/0:9,0:8:1.95:0,2,10	0/0:4,0:3:0.47:0,0,1	1/1:6,0:5:0.94:2,1,0	1/1:10,0:11:3.60:24,4,0	0/1:10,0:10:1.63:148,0,2	0/1:19,9:29:65.78:199,0,66	1/1:7,5:11:6.02:162,6,0	0/1:7,0:7:32.70:115,0,33	1/1:14,1:16:7.31:107,7,0	1/1:26,0:23:1.88:19,2,0	0/0:3,0:3:0.82:0,1,2	1/1:6,0:6:3.88:36,4,0	0/1:10,0:3:0:1,0,0	./.	1/1:7,0:7:5.88:57,6,0	1/1:3,0:3:6.01:64,6,0	./.
chr10	23211226	.	A	AAG	10308.42	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-3.899;DP=512;FS=153.375;HRun=0;HaplotypeScore=109.6821;InbreedingCoeff=0.9891;MQ=62.51;MQ0=10;MQRankSum=-1.501;QD=30.86;ReadPosRankSum=-0.423;VQSLOD=0.9026;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,18:24:36.11:561,36,0	0/0:7,0:7:21.07:0,21,266	0/0:27,0:16:27.55:0,28,377	0/0:47,0:23:40.70:0,41,460	1/1:0,11:11:27.09:450,27,0	1/1:2,15:17:33.11:551,33,0	1/1:1,12:12:18.06:300,18,0	1/1:3,27:31:78.06:1187,78,0	1/1:1,14:15:33.11:550,33,0	1/1:2,15:17:42.07:643,42,0	1/1:2,16:17:41.90:638,42,0	1/1:0,10:10:24.08:389,24,0	1/1:0,9:9:20.97:324,21,0	1/1:4,12:15:30.10:496,30,0	1/1:6,16:23:23.91:338,24,0	1/1:5,14:18:30.10:463,30,0	0/0:29,0:29:56.97:0,57,694	0/0:11,0:11:15.05:0,15,191	0/0:9,0:9:24.08:0,24,305	0/0:22,0:22:62.91:0,63,723	0/0:25,0:24:51:0,51,630	1/1:2,14:17:36.12:601,36,0	1/1:1,12:12:24.08:373,24,0	1/1:1,17:18:15.05:220,15,0	1/1:1,18:20:51.16:827,51,0	1/1:3,15:18:36.12:600,36,0	1/1:1,13:14:21.07:343,21,0	1/1:0,9:9:27.09:452,27,0
chr10	23211755	.	GTTT	G	7172.56	PASS	AB=1.000;AC=37;AF=0.661;AN=56;BaseQRankSum=5.698;DP=467;FS=3.740;HRun=13;HaplotypeScore=87.3023;InbreedingCoeff=0.8807;MQ=70.32;MQ0=3;MQRankSum=-1.507;QD=21.67;ReadPosRankSum=4.976;VQSLOD=4.0637;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:31:61.46:367,61,0	0/0:4,0:4:9.03:0,9,173	0/1:20,0:16:2.71:3,0,173	0/0:11,1:10:11:0,11,112	1/1:5,22:27:51.05:620,51,0	1/1:1,14:16:30.64:379,31,0	1/1:5,10:13:21.03:255,21,0	1/1:7,13:20:41.90:475,42,0	1/1:2,9:11:30.09:362,30,0	1/1:1,17:18:45.08:545,45,0	1/1:5,13:18:33.73:434,34,0	1/1:1,7:8:12.02:146,12,0	1/1:2,16:19:37.43:471,37,0	1/1:1,13:15:25.39:325,25,0	0/0:18,0:21:51.10:0,51,788	0/0:12,1:14:0.85:0,1,487	0/0:19,0:20:51.17:0,51,960	0/0:19,0:21:54.12:0,54,869	0/0:18,0:21:54.17:0,54,921	0/0:12,0:12:30.09:0,30,531	0/0:9,0:10:21.05:0,21,335	1/1:2,11:13:20.97:255,21,0	1/1:2,14:18:32.78:432,33,0	1/1:1,15:16:35.46:502,35,0	1/1:2,11:13:10.27:143,10,0	1/1:10,14:24:54.03:620,54,0	1/1:3,20:23:57.10:693,57,0	1/1:0,3:5:14.91:145,15,0
chr10	23211793	.	CACT	C	4342.60	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=5.868;DP=488;FS=14.364;HRun=0;HaplotypeScore=95.9067;InbreedingCoeff=0.9817;MQ=81.63;MQ0=3;MQRankSum=-10.130;QD=51.09;ReadPosRankSum=0.831;VQSLOD=6.2942;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:84.29:0,84,2009	0/0:5,0:5:15.05:0,15,364	0/0:18,0:17:42.14:0,42,954	0/0:19,0:19:54.06:0,54,1045	0/0:22,0:22:66.23:0,66,1590	0/0:17,0:17:48.16:0,48,1171	0/0:15,0:13:36.12:0,36,883	1/1:0,20:20:54.14:957,54,0	0/0:14,0:14:42.13:0,42,916	0/0:23,0:23:69.24:0,69,1665	0/0:17,0:17:51.17:0,51,1206	0/0:12,0:12:27.08:0,27,615	0/0:18,0:18:54.19:0,54,1297	0/0:19,0:18:45.15:0,45,1107	0/0:17,0:17:51.16:0,51,1167	0/0:15,0:15:45.14:0,45,1057	0/0:24,0:24:72.25:0,72,1773	0/0:11,0:11:30.10:0,30,739	0/0:18,0:18:54.19:0,54,1262	0/0:19,0:19:57.20:0,57,1370	0/0:9,0:9:27.09:0,27,666	0/0:12,0:12:33.11:0,33,755	0/0:21,0:21:57.03:0,57,1336	0/0:15,0:15:42.14:0,42,1033	0/0:11,0:11:24.08:0,24,592	1/1:2,26:28:10.79:1376,11,0	1/1:0,30:30:87.30:1618,87,0	1/1:0,7:7:21.07:391,21,0
chr10	23212053	.	G	GA	2658.93	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-10.234;DP=558;FS=10.504;HRun=8;HaplotypeScore=56.8110;InbreedingCoeff=0.9975;MQ=84.63;MQ0=0;MQRankSum=-0.335;QD=25.57;ReadPosRankSum=1.296;VQSLOD=4.0373;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:45.02:0,45,412	1/1:1,11:12:30.09:346,30,0	0/0:24,1:23:33:0,33,301	0/0:13,0:13:26.68:0,27,247	0/0:30,0:30:90.03:0,90,819	0/0:16,0:16:42.02:0,42,384	0/0:17,0:17:51.01:0,51,461	0/0:37,0:37:87.01:0,87,786	0/0:16,0:16:45.02:0,45,412	0/0:29,0:29:72.02:0,72,655	0/0:21,0:21:48.01:0,48,439	0/0:20,0:20:53.32:0,53,493	0/0:17,0:17:42.01:0,42,384	0/0:10,0:10:30.02:0,30,274	0/0:2,0:17:26.48:0,26,78	0/0:3,0:18:24.44:0,24,72	1/1:2,14:16:42.12:485,42,0	1/1:3,17:20:40.17:513,40,0	1/1:3,22:25:66.20:762,66,0	1/1:5,15:21:41.96:465,42,0	1/1:2,8:10:24.07:277,24,0	0/0:17,0:17:48.02:0,48,439	0/0:30,0:30:78.02:0,78,708	0/0:18,0:18:51.02:0,51,467	0/0:24,0:24:60.03:0,60,549	0/0:24,0:24:60.03:0,60,549	0/0:26,0:26:65.99:0,66,596	0/0:10,0:10:20.52:0,21,191
chr10	23213616	.	G	GGT	3658.89	PASS	AB=0.774;AC=12;AF=0.214;AN=56;BaseQRankSum=6.899;DP=422;FS=8.120;HRun=0;HaplotypeScore=64.5838;InbreedingCoeff=0.8010;MQ=84.11;MQ0=1;MQRankSum=-10.154;QD=38.11;ReadPosRankSum=-0.711;VQSLOD=5.1690;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:8:24.08:0,24,366	1/1:0,6:6:18.06:328,18,0	0/0:24,0:20:45.27:0,45,608	0/1:12,0:12:3.72:4,0,127	0/0:21,0:21:57.18:0,57,840	0/0:15,0:15:45.14:0,45,668	0/0:5,0:5:15.03:0,15,206	0/0:25,0:25:72.23:0,72,1063	0/0:12,0:12:36.11:0,36,532	0/0:18,0:18:47.44:0,47,715	0/0:17,0:17:44.88:0,45,631	0/0:3,0:3:9.03:0,9,138	0/0:14,0:14:42.14:0,42,642	0/0:16,0:16:48.16:0,48,735	0/0:18,0:18:54.18:0,54,826	0/0:10,0:10:30.10:0,30,459	1/1:6,9:14:36.10:619,36,0	0/1:5,8:13:9.80:460,0,10	1/1:7,6:14:20.10:498,20,0	1/1:6,24:30:87.25:1485,87,0	1/1:0,5:5:15.05:265,15,0	0/0:9,0:9:27.09:0,27,412	0/0:17,0:17:51.17:0,51,774	0/0:4,0:4:12.04:0,12,184	0/0:22,0:22:63.18:0,63,871	0/0:27,0:26:78.24:0,78,1132	0/0:29,0:29:78.25:0,78,1168	0/0:12,0:12:36.12:0,36,551
chr10	23213634	.	AAT	A	679.19	PASS	AB=1.000;AC=10;AF=0.179;AN=56;BaseQRankSum=11.707;DP=397;FS=6.700;HRun=0;HaplotypeScore=74.0021;InbreedingCoeff=0.5771;MQ=78.29;MQ0=0;MQRankSum=-10.496;QD=8.82;ReadPosRankSum=0.216;VQSLOD=2.6129;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:4:15.01:0,15,228	1/1:11,1:12:2.66:210,3,0	0/0:20,0:16:38.47:0,38,556	0/0:10,0:9:3.20:0,3,115	0/0:19,0:19:57.20:0,57,1143	0/0:15,0:15:45.15:0,45,879	0/0:4,0:4:12.04:0,12,241	0/0:32,0:32:93.31:0,93,1849	0/0:13,0:13:39.13:0,39,770	0/0:14,0:14:42.14:0,42,852	0/0:15,0:15:45.13:0,45,870	0/0:5,0:5:15.05:0,15,304	0/0:16,0:16:48.13:0,48,866	0/0:16,0:16:48.15:0,48,913	0/0:17,0:17:48.16:0,48,931	0/0:10,0:10:30.09:0,30,569	1/1:9,1:10:7.91:87,8,0	0/1:8,0:8:46.24:46,0,57	1/1:12,2:14:2.16:198,2,0	1/1:26,2:28:44.38:272,44,0	0/1:5,0:5:11.28:11,0,21	0/0:5,0:5:15.04:0,15,268	0/0:20,0:20:60.20:0,60,1179	0/0:3,0:3:9.03:0,9,182	0/0:14,0:14:42.14:0,42,852	0/0:25,0:25:75.21:0,75,1359	0/0:27,0:27:81.23:0,81,1475	0/0:15,0:15:39.05:0,39,711
chr10	23213635	.	AT	A	1736.86	PASS	AB=0.571;AC=11;AF=0.196;AN=56;BaseQRankSum=11.633;DP=396;FS=8.991;HRun=7;HaplotypeScore=62.3182;InbreedingCoeff=0.8262;MQ=77.34;MQ0=0;MQRankSum=-11.340;QD=22.56;ReadPosRankSum=-0.556;VQSLOD=3.1264;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:4:12.02:0,12,136	1/1:3,9:12:30.04:288,30,0	0/0:20,0:16:29.46:0,29,285	0/0:9,0:8:12.63:0,13,78	0/0:19,0:19:57.17:0,57,704	0/0:15,0:15:42.13:0,42,528	0/0:4,0:4:12.04:0,12,151	0/0:33,0:33:93.29:0,93,1160	0/0:13,0:13:36.12:0,36,453	0/0:14,0:14:42.13:0,42,528	0/0:15,0:15:45.13:0,45,553	0/0:5,0:5:15.05:0,15,189	0/0:16,0:16:39.12:0,39,491	0/0:16,0:16:45.13:0,45,552	0/0:16,0:16:45.13:0,45,553	0/0:10,0:10:27.09:0,27,340	1/1:2,8:10:27.06:271,27,0	0/1:2,6:8:16.68:162,0,17	1/1:4,10:14:35.81:343,36,0	1/1:3,25:28:78.16:785,78,0	1/1:2,3:5:6.01:61,6,0	0/0:5,0:5:12.04:0,12,151	0/0:20,0:20:57.18:0,57,717	0/0:3,0:3:9.03:0,9,113	0/0:14,0:14:42.13:0,42,528	0/0:25,0:25:63.19:0,63,782	0/0:27,0:27:72.20:0,72,879	0/0:15,0:15:32.69:0,33,415
chr10	23214046	.	TA	T	4487.56	PASS	AB=0.952;AC=27;AF=0.482;AN=56;BaseQRankSum=12.358;DP=501;FS=2.606;HRun=10;HaplotypeScore=64.9190;InbreedingCoeff=0.9486;MQ=76.23;MQ0=0;MQRankSum=-1.252;QD=18.47;ReadPosRankSum=0.280;VQSLOD=5.5460;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,9:14:16.88:228,17,0	1/1:1,9:10:21:182,21,0	0/1:19,1:15:0.70:1,0,127	0/0:16,0:14:16.81:0,17,256	0/0:19,0:20:56.98:0,57,603	0/0:17,0:17:26.85:0,27,507	0/0:17,0:17:45.11:0,45,490	1/1:10,18:28:56.96:492,57,0	0/0:16,0:16:39.11:0,39,431	0/0:28,0:27:75.20:0,75,829	0/0:25,0:25:66.17:0,66,723	0/0:19,0:19:57.15:0,57,630	0/0:13,1:14:13.03:0,13,363	0/0:14,0:14:36.04:0,36,383	1/1:1,16:17:44.99:391,45,0	1/1:4,17:21:35.87:312,36,0	1/1:1,7:8:21:182,21,0	1/1:2,10:12:29.98:258,30,0	1/1:0,12:12:35.99:313,36,0	1/1:2,25:27:71.97:625,72,0	1/1:1,10:11:26.99:234,27,0	0/0:16,0:16:48.06:0,48,515	0/0:23,0:23:57.15:0,57,631	0/0:11,0:11:21.06:0,21,232	0/0:22,0:22:45.11:0,45,490	1/1:5,22:27:35.13:515,35,0	1/1:4,26:30:74.98:651,75,0	1/1:0,6:6:12:104,12,0
chr10	23214462	.	G	GA	8461.28	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-15.417;DP=606;FS=0.000;HRun=8;HaplotypeScore=65.0735;InbreedingCoeff=0.9765;MQ=81.98;MQ0=0;MQRankSum=-2.435;QD=28.88;ReadPosRankSum=3.087;VQSLOD=4.8694;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:29:80.07:0,80,720	0/0:7,0:8:23.05:0,23,198	0/0:15,0:15:15.18:0,15,140	0/0:19,0:19:8.01:0,8,165	1/1:4,37:41:99:1246,108,0	1/1:0,13:13:39.12:450,39,0	1/1:4,18:22:42.12:485,42,0	0/0:32,0:32:81.02:0,81,738	1/1:4,21:25:57.17:656,57,0	1/1:1,23:24:69.20:796,69,0	1/1:3,13:16:39.12:450,39,0	1/1:4,11:15:33.10:381,33,0	1/1:2,27:29:84.17:951,84,0	1/1:3,17:20:26.71:561,27,0	0/0:32,0:32:87.04:0,87,796	0/0:17,0:17:45:0,45,401	0/0:25,0:25:47.97:0,48,432	0/0:7,0:7:20.99:0,21,187	0/0:30,0:30:72.01:0,72,655	0/0:29,0:29:80.97:0,81,731	0/0:14,0:14:39:0,39,352	1/1:3,16:19:45.09:505,45,0	1/1:2,15:17:14.66:423,15,0	1/1:1,15:16:42.12:485,42,0	1/1:3,33:36:93.28:1073,93,0	0/0:23,1:24:28.41:0,28,512	0/0:26,0:26:72.02:0,72,655	0/0:6,0:6:9:0,9,82
chr10	23215987	.	T	TTGTGTGTGTGTGTG	2277.76	PASS	AB=1.000;AC=17;AF=0.315;AN=54;BaseQRankSum=1.513;DP=518;FS=8.066;HRun=0;HaplotypeScore=217.6598;InbreedingCoeff=0.5036;MQ=65.58;MQ0=16;MQRankSum=-5.375;QD=11.80;ReadPosRankSum=-4.561;VQSLOD=0.6215;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:14,5:20:2.84:14,3,0	0/0:6,0:6:15.05:0,15,587	0/0:27,0:18:8.62:0,9,154	./.	0/0:13,0:13:14.80:0,15,416	0/0:23,0:21:35.37:0,35,1108	0/0:17,0:17:24:0,24,707	1/1:16,0:16:17.69:393,18,0	0/0:19,0:19:35.53:0,36,1234	0/0:27,0:27:48.15:0,48,1632	0/0:28,0:28:60.12:0,60,2119	0/0:12,0:12:16.87:0,17,591	0/0:14,0:12:23.74:0,24,773	0/0:24,0:23:38.91:0,39,1297	0/1:34,0:34:4.14:4,0,532	0/1:16,0:16:0.92:1,0,290	0/1:12,0:12:8:8,0,171	0/1:10,0:9:24.34:24,0,114	1/1:10,0:9:5.35:57,5,0	0/0:36,0:36:2.72:0,3,501	0/1:20,0:20:29.99:30,0,290	0/0:19,0:19:32.99:0,33,1260	0/0:15,0:15:8.06:0,8,232	0/0:10,0:7:8.92:0,9,354	0/0:19,0:18:29.95:0,30,980	1/1:22,0:20:26.56:730,27,0	1/1:23,0:20:21.07:840,21,0	1/1:9,0:5:9.50:348,10,0
chr10	23216008	.	TGTGTGAGA	T	82.34	PASS	AB=0.962;AC=9;AF=0.161;AN=56;BaseQRankSum=5.323;DP=465;FS=26.681;HRun=0;HaplotypeScore=142.7845;InbreedingCoeff=-0.1936;MQ=45.87;MQ0=23;MQRankSum=-2.511;QD=0.48;ReadPosRankSum=-2.785;VQSLOD=0.3385;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:22:15.05:15,0,121	0/0:7,0:7:15.99:0,16,247	0/0:10,0:4:9.03:0,9,166	0/0:5,0:1:3:0,3,28	0/0:10,0:9:18.05:0,18,273	0/0:22,0:19:33.58:0,34,565	0/0:17,0:16:30.57:0,31,485	0/0:15,0:15:29.89:0,30,361	0/0:17,0:16:34:0,34,578	0/0:23,0:22:23.44:0,23,865	0/0:29,0:29:62.95:0,63,997	0/1:11,0:11:87.99:88,0,266	0/0:12,0:9:23.29:0,23,381	0/0:22,0:21:41.91:0,42,679	0/1:31,0:31:15.54:16,0,559	0/1:17,0:17:8.42:8,0,417	0/1:10,0:10:2.22:2,0,157	0/0:11,0:10:12:0,12,173	0/0:8,0:5:9.03:0,9,126	0/1:35,0:35:36.85:37,0,780	0/0:17,0:17:24.01:0,24,321	0/0:16,0:16:32.14:0,32,578	0/1:8,9:16:19.56:28,0,20	0/1:12,0:8:8.69:9,0,140	0/1:17,0:16:8.99:9,0,404	0/0:19,0:16:13.40:0,13,509	0/0:23,0:19:7.35:0,7,299	0/0:9,0:5:9:0,9,155
chr10	23216012	.	TGAGAGAGAGAGAGAGAGAGAGAGA	T	1672.26	PASS	AB=0.858;AC=7;AF=0.146;AN=48;BaseQRankSum=5.775;DP=455;FS=16.328;HRun=0;HaplotypeScore=241.1327;InbreedingCoeff=0.3382;MQ=45.63;MQ0=23;MQRankSum=-4.654;QD=15.34;ReadPosRankSum=-3.352;VQSLOD=0.7568;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:6.02:0,6,368	0/0:7,0:7:12.93:0,13,780	./.	./.	0/0:12,0:11:6.02:0,6,305	0/0:22,0:19:12.04:0,12,773	0/0:19,0:18:6.91:0,7,323	0/0:13,0:14:6.02:0,6,144	0/0:17,0:16:15.05:0,15,993	0/0:24,0:23:30.08:0,30,1336	0/0:27,0:27:33.58:0,34,1824	0/0:11,0:11:21.07:0,21,1252	0/0:12,0:9:9.50:0,10,588	0/0:20,0:19:21.07:0,21,1253	0/1:21,4:29:29.48:387,0,29	0/1:14,0:19:29.49:297,0,29	1/1:9,1:10:1.75:182,2,0	./.	./.	1/1:27,5:35:17.49:923,17,0	0/1:16,0:16:0:0,0,0	0/0:15,0:16:21.07:0,21,1285	0/0:19,0:18:3.01:0,3,91	0/0:12,0:8:9.03:0,9,649	0/0:15,0:14:12.04:0,12,650	0/0:18,0:16:11.51:0,12,137	0/0:22,0:19:7.89:0,8,64	0/0:9,0:5:9.03:0,9,304
chr10	23216333	.	GA	G	1550.31	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=8.254;DP=658;FS=24.264;HRun=2;HaplotypeScore=62.9494;InbreedingCoeff=0.6438;MQ=76.06;MQ0=0;MQRankSum=-0.181;QD=26.73;ReadPosRankSum=-0.125;VQSLOD=1.9021;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,46:48:99:1636,126,0	0/0:10,0:10:30.10:0,30,450	0/0:19,0:19:16.72:0,17,649	0/1:10,0:10:19.89:20,0,200	0/0:34,0:34:99:0,102,1523	0/0:18,0:18:54.18:0,54,809	0/0:20,0:20:60.20:0,60,899	0/0:29,0:29:84.28:0,84,1259	0/0:19,0:19:57.19:0,57,854	0/0:30,0:30:90.28:0,90,1315	0/0:36,0:36:99:0,102,1446	0/0:28,0:28:84.27:0,84,1232	0/0:21,0:21:63.21:0,63,943	0/0:25,0:25:75.21:0,75,1064	0/0:26,0:26:78.25:0,78,1148	0/0:18,0:18:54.18:0,54,810	0/0:22,0:22:63.19:0,63,921	0/0:10,0:10:30.10:0,30,449	0/0:26,0:26:78.26:0,78,1169	0/0:22,0:22:66.22:0,66,989	0/0:30,0:30:90.29:0,90,1330	0/0:24,0:24:69.23:0,69,1034	0/0:22,0:22:60.20:0,60,899	0/0:22,0:22:66.22:0,66,980	0/0:26,0:26:75.25:0,75,1124	0/0:31,0:31:93.31:0,93,1370	0/0:23,0:23:63.21:0,63,944	0/0:9,0:9:24.06:0,24,330
chr10	23216947	.	TTTTG	T	1707.48	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.606;DP=707;FS=20.330;HRun=0;HaplotypeScore=112.5467;InbreedingCoeff=0.9824;MQ=75.10;MQ0=0;MQRankSum=-3.065;QD=44.93;ReadPosRankSum=1.884;VQSLOD=2.4409;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,38:38:93.32:1802,93,0	0/0:13,0:13:39.13:0,39,1042	0/0:17,0:17:51.16:0,51,1313	0/0:32,0:32:87.26:0,87,2238	0/0:40,0:39:99:0,111,2956	0/0:33,0:32:96.31:0,96,2551	0/0:21,0:21:63.22:0,63,1711	0/0:36,0:36:99:0,105,2780	0/0:17,0:17:51.17:0,51,1356	0/0:29,0:29:87.30:0,87,2370	0/0:27,0:27:81.26:0,81,2139	0/0:20,0:20:60.21:0,60,1628	0/0:28,0:28:78.27:0,78,2114	0/0:24,0:24:72.25:0,72,1953	0/0:28,0:28:84.27:0,84,2164	0/0:23,0:23:66.23:0,66,1808	0/0:17,0:17:51.17:0,51,1273	0/0:8,0:8:24.08:0,24,657	0/0:13,0:13:39.13:0,39,1069	0/0:32,0:32:96.32:0,96,2525	0/0:31,0:31:93.32:0,93,2442	0/0:41,0:41:99:0,123,3268	0/0:31,0:31:93.32:0,93,2493	0/0:20,0:20:57.20:0,57,1532	0/0:24,0:24:69.24:0,69,1828	0/0:27,0:27:81.28:0,81,2204	0/0:32,0:32:93.32:0,93,2546	0/0:5,0:5:15.05:0,15,392
chr10	23217430	.	TG	T	5239.08	PASS	AB=1.000;AC=44;AF=0.957;AN=46;BaseQRankSum=-3.973;DP=255;FS=0.000;HRun=1;HaplotypeScore=28.5334;InbreedingCoeff=-0.0862;MQ=59.90;MQ0=19;MQRankSum=-2.640;QD=20.96;ReadPosRankSum=3.073;VQSLOD=4.8971;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	1/1:0,4:4:6.02:84,6,0	0/1:28,0:6:18.24:18,0,105	0/1:36,0:7:46.71:72,0,47	1/1:0,13:12:21.07:293,21,0	1/1:0,9:7:15.05:209,15,0	./.	1/1:0,1:1:3.01:42,3,0	1/1:0,7:7:9.03:125,9,0	1/1:0,5:5:15.05:210,15,0	1/1:0,19:18:27.09:377,27,0	1/1:0,7:6:12.04:167,12,0	1/1:0,5:4:12.04:167,12,0	1/1:0,11:11:24.08:335,24,0	1/1:0,7:7:12.04:167,12,0	1/1:0,8:7:21.07:293,21,0	1/1:1,1:1:3.01:42,3,0	1/1:1,1:1:3.01:42,3,0	1/1:1,1:1:3.01:42,3,0	1/1:0,22:21:54.18:753,54,0	./.	1/1:0,10:8:15.05:209,15,0	1/1:0,10:10:18.06:251,18,0	./.	1/1:0,12:12:24.08:335,24,0	1/1:0,13:13:33.11:461,33,0	1/1:0,17:16:39.13:544,39,0	./.
chr10	23218060	.	G	GA	2648.30	PASS	AB=0.882;AC=27;AF=0.643;AN=42;BaseQRankSum=3.031;DP=472;FS=12.285;HRun=3;HaplotypeScore=56.5546;InbreedingCoeff=0.7061;MQ=19.64;MQ0=212;MQRankSum=-3.897;QD=13.79;ReadPosRankSum=3.711;VQSLOD=1.4569;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:43,1:11:12:0,12,128	./.	./.	./.	1/1:9,2:2:3.01:42,3,0	1/1:2,12:11:33.11:454,33,0	./.	./.	1/1:5,2:2:6.02:84,6,0	1/1:16,10:10:24.06:318,24,0	1/1:3,5:3:3.01:42,3,0	1/1:3,3:4:9.03:126,9,0	1/1:3,5:4:12.04:168,12,0	1/1:5,7:7:15.02:188,15,0	0/1:26,4:13:55.39:55,0,156	0/0:28,0:15:23.96:0,24,253	0/0:43,0:7:9.03:0,9,108	0/0:20,0:5:12.04:0,12,142	0/0:21,0:5:15.05:0,15,180	0/0:45,0:22:45.12:0,45,525	0/0:24,0:8:21.03:0,21,236	1/1:5,5:5:12.04:168,12,0	./.	1/1:7,1:1:3.01:42,3,0	./.	1/1:8,10:10:27.09:376,27,0	1/1:7,19:19:48.16:671,48,0	1/1:6,2:2:6.02:84,6,0
chr10	23219956	.	CAG	C	966.65	PASS	AC=22;AF=0.579;AN=38;BaseQRankSum=2.253;DP=604;FS=0.000;HRun=0;HaplotypeScore=19.9591;InbreedingCoeff=0.6759;MQ=14.69;MQ0=430;MQRankSum=-1.553;QD=4.60;ReadPosRankSum=-1.072;VQSLOD=1.1737;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:21:39.12:0,39,715	./.	./.	./.	./.	1/1:9,5:6:9.03:137,9,0	1/1:15,4:4:9.03:137,9,0	./.	1/1:5,6:5:6.02:91,6,0	1/1:23,2:2:2.99:24,3,0	1/1:34,0:2:2.99:24,3,0	./.	1/1:8,7:6:9.03:137,9,0	1/1:4,12:9:15.01:201,15,0	0/0:28,0:11:12.04:0,12,230	0/0:25,0:7:9.03:0,9,163	0/0:30,0:7:5.99:0,6,79	0/0:30,0:10:18.06:0,18,346	0/0:18,0:3:6.02:0,6,116	0/0:29,0:4:9.03:0,9,173	0/0:44,0:7:6.02:0,6,103	./.	./.	1/1:23,2:2:3.01:46,3,0	1/1:13,3:3:3.01:46,3,0	1/1:17,8:8:12.04:183,12,0	1/1:6,4:4:6.02:91,6,0	./.
chr10	23220161	.	GGAATCAGAGAAA	G	729.02	PASS	AC=14;AF=0.778;AN=18;BaseQRankSum=-0.091;DP=476;FS=3.358;HRun=0;HaplotypeScore=14.5914;MQ=14.13;MQ0=259;MQRankSum=-1.552;QD=5.98;ReadPosRankSum=-1.734;VQSLOD=0.4633;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	1/1:7,7:6:6.02:225,6,0	./.	./.	./.	./.	./.	1/1:8,6:2:5.96:44,6,0	./.	1/1:16,5:4:6.02:226,6,0	./.	./.	0/0:9,9:3:3.01:0,3,135	./.	./.	1/1:6,15:4:3.01:112,3,0	./.	0/0:16,1:2:3.01:0,3,157	1/1:9,3:1:2.96:19,3,0	./.	./.	./.	./.	./.	1/1:4,9:5:3.01:113,3,0	1/1:17,10:3:8.95:77,9,0	./.	./.
chr10	23220637	.	A	AT	14154.98	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-6.258;DP=480;FS=4.768;HRun=6;HaplotypeScore=38.1758;InbreedingCoeff=0.9482;MQ=69.60;MQ0=0;MQRankSum=-6.122;QD=31.25;ReadPosRankSum=4.563;VQSLOD=4.8710;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,5:7:12:133,12,0	1/1:4,3:7:9.03:112,9,0	0/0:11,0:11:27.06:0,27,273	0/0:16,0:16:33.07:0,33,337	1/1:2,23:25:66.21:830,66,0	1/1:3,27:30:78.25:981,78,0	1/1:1,14:15:39.12:491,39,0	1/1:10,24:34:75.16:909,75,0	1/1:0,22:22:54.17:679,54,0	1/1:2,16:18:51.16:639,51,0	1/1:1,22:23:63.16:775,63,0	1/1:1,17:18:48.15:604,48,0	1/1:1,12:13:36.11:451,36,0	1/1:1,19:20:48.15:604,48,0	1/1:1,14:15:30.10:377,30,0	1/1:3,10:12:27.09:340,27,0	1/1:0,21:21:60.19:755,60,0	1/1:1,15:16:39.12:491,39,0	1/1:1,12:13:36.12:453,36,0	1/1:0,18:18:54.10:644,54,0	1/1:2,7:9:21.07:264,21,0	1/1:1,16:17:42.13:528,42,0	1/1:0,14:14:36.12:452,36,0	1/1:0,12:12:30.10:377,30,0	1/1:1,19:20:51.16:642,51,0	1/1:1,17:18:51.16:642,51,0	1/1:1,26:27:60.19:755,60,0	1/1:2,6:8:18.06:226,18,0
chr10	23221336	.	A	AC	26707.15	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-6.673;DP=768;FS=0.000;HRun=2;HaplotypeScore=74.3077;InbreedingCoeff=0.9833;MQ=57.95;MQ0=5;MQRankSum=4.857;QD=37.40;ReadPosRankSum=5.875;VQSLOD=4.9683;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,35:38:99:1425,100,0	1/1:0,10:10:27.09:389,27,0	0/0:23,0:10:27.01:0,27,298	0/0:31,0:17:50.62:0,51,542	1/1:0,27:27:66.65:927,67,0	1/1:0,25:25:72.24:1037,72,0	1/1:1,22:23:60.20:863,60,0	1/1:8,27:26:63.18:883,63,0	1/1:1,37:37:96.24:1334,96,0	1/1:4,14:18:51.13:704,51,0	1/1:0,21:21:63.21:901,63,0	1/1:0,21:21:57.19:821,57,0	1/1:3,27:30:72.24:1037,72,0	1/1:0,30:30:83.99:1186,84,0	1/1:3,44:47:99:1857,129,0	1/1:1,35:36:96.32:1383,96,0	1/1:2,34:36:99:1426,99,0	1/1:2,29:30:84.28:1195,84,0	1/1:4,14:15:42.14:605,42,0	1/1:3,26:29:75.21:1052,75,0	1/1:2,42:44:99:1597,111,0	1/1:1,20:21:54.18:777,54,0	1/1:0,20:20:51.17:733,51,0	1/1:0,28:28:81.27:1166,81,0	1/1:2,22:24:66.22:950,66,0	1/1:3,25:28:75.25:1077,75,0	1/1:1,30:31:84.28:1209,84,0	1/1:0,5:5:12.04:173,12,0
chr10	23221504	.	AG	A	3686.64	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=7.214;DP=571;FS=6.920;HRun=7;HaplotypeScore=79.1861;InbreedingCoeff=0.9506;MQ=63.22;MQ0=4;MQRankSum=-1.694;QD=25.08;ReadPosRankSum=0.030;VQSLOD=3.9051;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:90.02:0,90,1105	0/0:5,0:5:9.03:0,9,113	0/0:22,0:12:1.95:0,2,74	0/0:28,0:17:20.28:0,20,214	0/0:22,0:22:63.20:0,63,792	0/0:14,0:14:39.12:0,39,491	0/0:13,0:13:33.11:0,33,415	0/0:29,0:27:61.99:0,62,727	0/0:17,0:17:45.14:0,45,566	0/0:14,0:14:33.11:0,33,415	0/0:15,0:15:42.13:0,42,528	0/0:13,0:13:39.12:0,39,488	0/0:22,0:22:57.16:0,57,687	0/0:29,0:29:72.22:0,72,892	1/1:1,30:32:94.75:946,95,0	1/1:9,11:20:45.03:430,45,0	1/1:5,24:29:69.04:673,69,0	1/1:2,17:20:53.15:527,53,0	1/1:3,8:10:24.01:234,24,0	1/1:5,17:22:56.98:541,57,0	1/1:1,12:13:33.07:337,33,0	0/0:20,0:20:60.18:0,60,741	0/0:23,0:23:66.04:0,66,804	0/0:12,0:12:33.11:0,33,415	0/0:35,0:35:99:0,99,1234	0/0:23,0:23:63.13:0,63,761	0/0:30,0:30:84.27:0,84,1056	0/0:7,0:7:18.06:0,18,226
chr10	23221572	.	TA	T	11458.36	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-1.400;DP=482;FS=5.367;HRun=8;HaplotypeScore=57.1745;InbreedingCoeff=0.9608;MQ=61.36;MQ0=1;MQRankSum=-2.225;QD=24.75;ReadPosRankSum=4.106;VQSLOD=5.6445;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,19:22:63.10:608,63,0	1/1:1,8:9:21.03:203,21,0	0/0:8,1:6:13.03:0,13,162	0/0:9,0:7:12.92:0,13,147	1/1:0,26:26:72.11:693,72,0	1/1:2,17:19:51.08:493,51,0	1/1:1,9:10:27.04:261,27,0	1/1:8,26:34:74.94:723,75,0	1/1:1,8:9:21.03:203,21,0	1/1:0,12:12:36.06:347,36,0	1/1:1,19:20:48.07:462,48,0	1/1:2,10:12:30.05:290,30,0	1/1:0,9:9:27.04:261,27,0	1/1:2,21:23:60.10:579,60,0	1/1:2,18:20:51.08:492,51,0	1/1:2,13:15:39.05:372,39,0	1/1:4,11:15:42.07:405,42,0	1/1:4,8:12:30.04:289,30,0	1/1:2,9:11:27.04:260,27,0	1/1:1,27:28:75.12:724,75,0	1/1:2,6:8:21.03:202,21,0	1/1:2,14:16:36.06:348,36,0	1/1:1,26:27:69.11:666,69,0	1/1:1,11:12:33.05:319,33,0	1/1:0,26:26:69.11:665,69,0	1/1:3,23:26:69.11:666,69,0	1/1:3,26:29:78.12:753,78,0	1/1:3,10:13:18.01:174,18,0
chr10	23221999	.	C	CTG	25592.08	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=1.321;DP=577;FS=2.923;HRun=0;HaplotypeScore=142.7540;InbreedingCoeff=0.9707;MQ=84.74;MQ0=1;MQRankSum=-10.467;QD=48.02;ReadPosRankSum=6.026;VQSLOD=5.4362;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,19:22:45.14:834,45,0	1/1:0,7:7:18.06:347,18,0	0/0:22,0:22:65.72:0,66,878	0/0:22,0:22:30.01:0,30,719	1/1:7,20:27:60.18:1109,60,0	1/1:2,24:26:60.21:1156,60,0	1/1:1,18:19:57.20:1091,57,0	1/1:5,33:38:99:1986,108,0	1/1:3,15:18:45.15:856,45,0	1/1:7,29:36:99:1956,105,0	1/1:3,26:29:69.24:1329,69,0	1/1:1,10:11:30.09:546,30,0	1/1:2,21:24:69.24:1320,69,0	1/1:4,19:22:57.18:1062,57,0	1/1:2,17:19:39.13:752,39,0	1/1:1,16:17:45.15:853,45,0	1/1:2,16:18:48.16:921,48,0	1/1:2,4:6:14.92:246,15,0	1/1:5,14:19:54.17:970,54,0	1/1:9,23:32:72.23:1325,72,0	1/1:1,15:16:42.14:807,42,0	1/1:4,20:24:60.20:1135,60,0	1/1:5,22:27:63.22:1214,63,0	1/1:1,9:10:24.08:463,24,0	1/1:2,16:18:51.15:927,51,0	1/1:3,15:18:51.17:953,51,0	1/1:6,19:25:66.20:1203,66,0	1/1:0,4:4:12.04:232,12,0
chr10	23222058	.	C	CT	22077.74	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=0.969;DP=598;FS=3.717;HRun=1;HaplotypeScore=111.6612;InbreedingCoeff=0.9473;MQ=90.21;MQ0=0;MQRankSum=-10.829;QD=40.58;ReadPosRankSum=4.469;VQSLOD=4.6638;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,23:24:63.17:912,63,0	1/1:0,12:12:36.12:538,36,0	0/0:26,0:26:44.68:0,45,676	0/0:28,0:28:62.19:0,62,772	1/1:1,28:29:75.25:1123,75,0	1/1:2,29:31:84.25:1233,84,0	1/1:3,17:20:57.18:830,57,0	1/1:2,39:41:99:1638,119,0	1/1:1,13:14:33.11:494,33,0	1/1:4,34:38:99:1528,102,0	1/1:4,20:24:57.10:784,57,0	1/1:1,18:19:54.14:784,54,0	1/1:1,27:28:81.25:1190,81,0	1/1:2,21:23:63.21:941,63,0	1/1:2,20:22:66.15:941,66,0	1/1:3,19:22:54.18:809,54,0	1/1:1,11:12:36.11:519,36,0	1/1:1,8:9:24.08:359,24,0	1/1:2,18:20:60.15:837,60,0	1/1:0,24:24:69.23:1033,69,0	1/1:1,14:15:42.06:579,42,0	1/1:1,16:17:48.16:718,48,0	1/1:1,23:24:66.22:987,66,0	1/1:0,13:13:39.09:559,39,0	1/1:1,17:18:54.18:808,54,0	1/1:0,17:17:51.16:744,51,0	1/1:2,24:26:75.24:1098,75,0	1/1:0,2:2:6.02:90,6,0
chr10	23222909	.	G	GTATA	4512.87	PASS	AB=0.929;AC=45;AF=0.804;AN=56;BaseQRankSum=-4.897;DP=330;FS=3.697;HRun=0;HaplotypeScore=77.3495;InbreedingCoeff=0.2187;MQ=72.77;MQ0=6;MQRankSum=-0.524;QD=14.94;ReadPosRankSum=-1.347;VQSLOD=4.0825;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:14:9.40:165,9,0	1/1:3,0:3:8.82:54,9,0	0/0:18,0:15:38.35:0,38,323	0/0:10,0:7:17.75:0,18,139	1/1:23,0:23:7.26:244,7,0	1/1:17,0:17:12.96:198,13,0	0/1:13,0:13:41.94:139,0,42	1/1:30,0:26:68.77:597,69,0	1/1:8,0:8:4.10:141,4,0	0/1:11,0:11:63.35:103,0,63	1/1:13,0:13:26.85:209,27,0	1/1:8,0:8:17.76:126,18,0	1/1:8,0:8:18.16:119,18,0	1/1:11,0:11:0.76:110,1,0	1/1:7,0:7:2.99:25,3,0	1/1:5,0:5:11.98:98,12,0	0/1:3,0:3:4.72:12,0,5	1/1:6,0:6:11.12:83,11,0	0/1:16,0:16:3.72:179,0,4	0/1:10,0:10:0.71:41,0,1	1/1:7,0:7:8.97:70,9,0	1/1:4,0:4:3:25,3,0	0/1:9,0:9:14.31:109,0,14	1/1:7,0:7:17.79:125,18,0	1/1:12,0:12:17.89:142,18,0	1/1:1,20:21:54.07:1018,54,0	0/1:0,21:22:0.13:0,0,0	1/1:13,0:12:18.03:381,18,0
chr10	23222941	.	ATG	A	83.29	PASS	AB=0.717;AC=8;AF=0.174;AN=46;BaseQRankSum=5.186;DP=285;FS=0.000;HRun=0;HaplotypeScore=66.2942;InbreedingCoeff=0.3469;MQ=45.19;MQ0=39;MQRankSum=-2.902;QD=2.52;ReadPosRankSum=-1.225;VQSLOD=1.4202;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:8:5.33:0,5,64	0/0:3,0:3:6.02:0,6,116	0/0:11,0:1:3.01:0,3,41	./.	0/0:21,0:21:33.11:0,33,621	0/0:16,0:16:24.06:0,24,413	0/0:14,0:14:27.07:0,27,456	0/0:27,0:22:66.17:0,66,1006	0/0:7,0:7:15.05:0,15,258	0/0:10,0:10:17.42:0,17,493	0/0:10,0:9:12.04:0,12,216	0/0:10,0:10:15.05:0,15,258	0/0:9,0:9:15.05:0,15,290	0/0:11,0:11:15.05:0,15,290	./.	./.	1/1:2,1:3:2.97:20,3,0	0/1:2,1:3:21.56:22,0,41	0/1:7,6:13:51.96:114,0,52	1/1:4,6:10:3.45:22,3,0	1/1:2,2:4:2.99:24,3,0	./.	0/0:5,0:5:12.04:0,12,232	0/0:3,0:3:6.02:0,6,116	0/0:6,0:6:3.01:0,3,58	0/0:14,0:14:39.13:0,39,679	./.	0/0:10,0:8:15.05:0,15,238
chr10	23222947	.	GTATGT	G	240.34	PASS	AB=0.875;AC=7;AF=0.167;AN=42;BaseQRankSum=4.842;DP=261;FS=0.000;HRun=0;HaplotypeScore=67.8934;InbreedingCoeff=0.3175;MQ=43.77;MQ0=42;MQRankSum=-4.431;QD=7.75;ReadPosRankSum=0.658;VQSLOD=1.7505;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:6:4.26:0,4,50	0/0:3,0:3:6.02:0,6,196	./.	./.	0/0:20,0:20:30.10:0,30,972	0/0:14,0:14:17.97:0,18,585	0/0:11,0:11:18.06:0,18,570	0/0:28,0:23:69.23:0,69,1302	0/0:5,0:5:9.03:0,9,295	0/1:9,0:9:4.21:4,0,741	0/0:10,0:9:12.03:0,12,282	0/0:9,0:9:12.02:0,12,318	0/0:9,0:9:15.05:0,15,486	0/0:11,0:11:15.05:0,15,474	./.	./.	1/1:1,1:2:3.01:39,3,0	0/1:3,0:3:1.25:36,0,1	0/1:4,6:10:28.78:230,0,29	1/1:1,6:7:2.99:40,3,0	./.	./.	0/0:5,0:5:12.04:0,12,390	0/0:3,0:3:6.02:0,6,196	0/0:5,0:5:3.01:0,3,98	0/0:14,0:13:36.12:0,36,1122	./.	0/0:11,0:8:15.03:0,15,384
chr10	23222960	.	GAT	G	1783.73	PASS	AB=0.833;AC=36;AF=0.900;AN=40;BaseQRankSum=4.559;DP=239;FS=0.000;HRun=0;HaplotypeScore=51.4497;InbreedingCoeff=0.1712;MQ=41.37;MQ0=46;MQRankSum=4.449;QD=12.13;ReadPosRankSum=2.136;VQSLOD=3.1236;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	1/1:2,2:4:6.91:88,7,0	./.	./.	1/1:3,16:19:23.39:343,23,0	1/1:4,9:13:11.95:172,12,0	1/1:6,1:6:3.01:43,3,0	0/0:27,0:20:55.95:0,56,756	1/1:3,2:5:6.02:86,6,0	1/1:3,3:6:9.03:123,9,0	1/1:2,6:7:6.02:86,6,0	1/1:2,6:8:9.03:129,9,0	1/1:0,8:8:11.86:172,12,0	1/1:1,8:9:9.03:129,9,0	./.	./.	1/1:1,1:2:2.22:7,2,0	1/1:2,2:4:4.90:47,5,0	1/1:8,1:9:21.17:158,21,0	1/1:6,1:7:2.49:9,2,0	./.	./.	1/1:0,3:3:6.02:86,6,0	1/1:0,3:3:6.02:86,6,0	1/1:4,1:5:3.01:43,3,0	0/1:13,0:12:45.55:46,0,67	./.	0/1:7,7:11:34.15:47,0,34
chr10	23222990	.	G	GAT	124.72	PASS	AB=0.933;AC=9;AF=0.300;AN=30;BaseQRankSum=2.639;DP=159;FS=0.000;HRun=0;HaplotypeScore=25.1376;InbreedingCoeff=0.2661;MQ=30.48;MQ0=44;MQRankSum=-3.194;QD=1.83;ReadPosRankSum=2.194;VQSLOD=0.9815;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:2,0:2:0:0,0,0	1/1:3,1:2:3:28,3,0	./.	./.	0/0:10,0:10:9.02:0,9,98	0/0:7,1:7:3.01:0,3,33	./.	0/1:35,0:11:56.72:57,0,184	./.	0/0:2,0:2:3.01:0,3,41	0/0:7,0:6:3.01:0,3,32	0/0:7,0:7:2.99:0,3,24	0/1:5,0:4:0:0,0,0	0/0:4,0:4:3.01:0,3,41	./.	./.	./.	0/0:3,0:3:0.47:0,0,1	0/1:3,1:3:2.52:44,0,3	./.	./.	./.	./.	./.	1/1:6,1:6:2.04:6,2,0	0/0:7,0:4:9.02:0,9,108	./.	1/1:12,1:8:8.88:87,9,0
chr10	23222996	.	G	GAT	202.42	PASS	AB=0.883;AC=11;AF=0.423;AN=26;BaseQRankSum=1.376;DP=145;FS=0.000;HRun=0;HaplotypeScore=23.8901;InbreedingCoeff=0.2853;MQ=27.31;MQ0=47;MQRankSum=-1.905;QD=2.85;ReadPosRankSum=2.011;VQSLOD=1.0338;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:3,0:3:2.74:0,3,12	1/1:2,2:2:3:28,3,0	./.	./.	0/1:8,1:9:0:0,0,0	0/0:6,1:6:0:0,0,0	./.	0/1:29,3:8:33.95:89,0,34	./.	0/0:1,0:1:3.01:0,3,36	./.	./.	0/1:4,1:4:0:0,0,0	0/0:4,0:4:2.99:0,3,24	./.	./.	./.	0/0:2,1:3:0.47:0,0,1	1/1:2,1:2:3.01:43,3,0	./.	./.	./.	./.	./.	1/1:4,4:6:2.04:6,2,0	0/0:3,2:2:6.01:0,6,67	./.	1/1:4,6:5:9.02:126,9,0
chr10	23223002	.	G	GAT	125.28	PASS	AB=1.000;AC=10;AF=0.417;AN=24;BaseQRankSum=1.929;DP=139;FS=0.000;HRun=0;HaplotypeScore=17.5067;InbreedingCoeff=0.2472;MQ=23.22;MQ0=57;MQRankSum=-0.849;QD=2.16;ReadPosRankSum=1.466;VQSLOD=0.8654;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:3,0:3:0.89:0,1,2	1/1:3,1:2:3:28,3,0	./.	./.	0/0:7,0:7:0:0,0,0	0/0:7,0:5:0:0,0,0	./.	0/1:29,0:5:25.62:55,0,26	./.	0/0:2,0:1:0.89:0,1,2	./.	./.	0/1:5,0:4:0:0,0,0	./.	./.	./.	./.	0/0:1,1:2:0.47:0,0,1	1/1:2,1:1:3.01:49,3,0	./.	./.	./.	./.	./.	1/1:6,1:5:2.04:6,2,0	0/0:4,0:1:2.99:0,3,24	./.	1/1:10,0:5:8.87:67,9,0
chr10	23223394	.	C	CCTT	12205.25	PASS	AC=52;AF=1.000;AN=52;DP=474;FS=0.000;HRun=0;HaplotypeScore=71.4793;InbreedingCoeff=-0.0132;MQ=30.51;MQ0=134;QD=27.93;VQSLOD=4.8736;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,38:29:57.03:1042,57,0	1/1:0,10:8:24.08:551,24,0	./.	./.	1/1:2,21:19:20.94:335,21,0	1/1:1,13:11:15.05:345,15,0	1/1:0,9:9:18.02:364,18,0	1/1:2,13:9:27.06:558,27,0	1/1:0,18:16:23.80:440,24,0	1/1:2,12:15:38.89:691,39,0	1/1:0,12:10:12.43:148,12,0	1/1:0,13:10:17.76:364,18,0	1/1:2,5:6:12.01:229,12,0	1/1:1,11:9:11.99:227,12,0	1/1:2,13:11:15.01:296,15,0	1/1:1,13:14:20.84:482,21,0	1/1:0,24:21:30.10:680,30,0	1/1:0,12:10:18.06:414,18,0	1/1:0,19:16:42.09:891,42,0	1/1:0,16:16:44.99:816,45,0	1/1:1,21:13:30.02:591,30,0	1/1:2,16:16:29.84:372,30,0	1/1:3,16:17:20.90:399,21,0	1/1:0,12:12:18.02:333,18,0	1/1:1,14:13:20.93:384,21,0	1/1:2,16:12:30.05:640,30,0	1/1:0,24:17:29.85:544,30,0	1/1:0,3:1:3.01:69,3,0
chr10	23224221	.	G	GCA	2529.53	PASS	AB=0.814;AC=25;AF=0.446;AN=56;BaseQRankSum=-0.206;DP=519;FS=1.813;HRun=0;HaplotypeScore=119.9806;InbreedingCoeff=-0.0922;MQ=54.02;MQ0=8;MQRankSum=-0.473;QD=6.99;ReadPosRankSum=-2.861;VQSLOD=2.4915;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:18:5.87:0,6,182	1/1:1,1:5:3:25,3,0	0/0:19,0:3:6.02:0,6,75	0/0:31,0:4:6.02:0,6,78	0/1:15,11:27:7.06:183,0,7	0/1:15,4:19:30.66:199,0,31	0/1:14,4:17:29.34:179,0,29	1/1:16,0:16:2.94:26,3,0	1/1:4,3:13:0.31:153,0,0	1/1:11,1:25:38.82:375,39,0	0/1:15,3:22:7.09:143,0,7	1/1:14,8:23:11.88:412,12,0	0/1:5,13:18:32:279,0,32	0/1:9,10:20:44.04:116,0,44	0/1:17,1:18:13.92:14,0,343	0/0:16,0:16:28.14:0,28,311	0/0:10,0:9:1.49:0,1,114	0/0:6,0:6:17.29:0,17,159	0/1:15,0:15:62.44:62,0,370	0/0:27,0:26:26.36:0,26,442	0/0:19,0:19:14.49:0,14,177	1/1:4,9:13:6.02:89,6,0	0/1:18,1:19:24.34:93,0,24	0/1:15,5:20:55.73:196,0,56	0/1:9,8:19:20.17:78,0,20	0/1:19,1:20:52.26:55,0,52	0/1:26,1:30:18.15:18,0,236	0/0:9,0:9:17.04:0,17,115
chr10	23224223	.	ACG	A	2417.52	PASS	AB=0.985;AC=21;AF=0.375;AN=56;BaseQRankSum=-11.558;DP=509;FS=13.686;HRun=0;HaplotypeScore=106.7458;InbreedingCoeff=-0.0859;MQ=53.78;MQ0=8;MQRankSum=2.005;QD=7.37;ReadPosRankSum=-2.174;VQSLOD=1.7446;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:18:13.96:0,14,97	0/0:5,0:4:0.89:0,1,2	0/0:18,0:3:5.65:0,6,31	0/0:30,0:4:5.69:0,6,65	0/1:27,0:27:17.14:216,0,17	0/1:18,1:19:31.15:138,0,31	0/1:18,1:18:31.09:164,0,31	1/1:16,0:16:28.50:371,28,0	0/1:14,0:14:11.72:12,0,30	0/1:22,0:22:69.40:150,0,69	0/1:21,0:20:17.54:100,0,18	0/1:23,0:23:11.38:204,0,11	0/1:18,0:18:4.15:4,0,58	0/1:20,0:20:25.63:26,0,81	0/0:18,0:18:43.43:0,43,417	0/0:16,0:16:44.98:0,45,501	0/0:9,0:8:14.43:0,14,110	0/0:6,0:6:14.95:0,15,139	0/0:14,0:14:34.23:0,34,269	0/0:26,0:25:47.42:0,47,410	0/0:19,0:19:23.82:0,24,205	1/1:12,0:12:2.47:66,2,0	0/1:19,0:19:4.61:206,0,5	0/1:20,0:20:88.47:88,0,89	1/1:18,1:19:2.99:175,3,0	1/1:21,0:21:0.76:363,1,0	0/1:29,0:29:99:227,0,166	0/1:8,1:9:70.77:71,0,74
chr10	23224225	.	G	GCACACA	2203.03	PASS	AB=0.980;AC=32;AF=0.593;AN=54;BaseQRankSum=2.117;DP=545;FS=13.619;HRun=0;HaplotypeScore=160.9384;InbreedingCoeff=-0.1170;MQ=53.88;MQ0=8;MQRankSum=0.590;QD=5.02;ReadPosRankSum=-2.785;VQSLOD=1.5196;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:21,0:20:0:0,0,0	1/1:5,0:4:3.01:49,3,0	./.	0/0:30,0:5:2.81:0,3,31	0/1:29,0:29:43.35:97,0,43	0/1:22,0:22:76.07:109,0,76	0/1:18,0:17:48.29:48,0,86	1/1:23,0:23:8.77:54,9,0	0/1:15,0:15:24.85:228,0,25	1/1:23,0:23:38.96:537,39,0	0/1:21,0:20:32.82:51,0,33	0/1:22,0:22:14.32:143,0,14	0/1:20,0:20:72.31:72,0,121	0/1:20,0:20:45.37:45,0,117	0/1:13,0:21:54.13:54,0,55	0/0:10,0:19:13.11:0,13,127	1/1:9,2:17:7.67:57,8,0	1/1:5,0:6:6.02:77,6,0	1/1:15,0:15:9.03:216,9,0	1/1:16,8:26:12.04:267,12,0	1/1:19,0:19:11.86:143,12,0	1/1:12,0:12:5.06:21,5,0	0/1:19,0:19:6.77:7,0,82	0/1:22,0:22:59.77:60,0,155	0/1:20,0:20:16.59:17,0,73	0/1:21,0:21:17.55:18,0,158	0/0:30,0:30:30.97:0,31,593	0/0:10,0:10:18.03:0,18,246
chr10	23224763	.	CT	C	1528.27	PASS	AB=0.784;AC=20;AF=0.357;AN=56;BaseQRankSum=2.295;DP=433;FS=4.950;HRun=14;HaplotypeScore=72.8792;InbreedingCoeff=0.6803;MQ=69.00;MQ0=0;MQRankSum=-1.806;QD=8.31;ReadPosRankSum=0.256;VQSLOD=2.8641;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:42.02:0,42,377	0/0:3,0:4:11.98:0,12,104	0/0:12,0:9:11.64:0,12,90	0/1:9,1:8:1.02:16,0,1	0/1:17,2:20:5.96:6,0,262	0/0:24,0:26:53.74:0,54,475	0/0:18,1:21:25:0,25,335	1/1:8,21:31:52.71:341,53,0	0/0:12,1:13:6.33:0,6,183	0/0:14,0:15:19.93:0,20,184	0/0:13,0:13:23.96:0,24,207	0/0:8,0:9:20.86:0,21,181	0/0:16,0:16:36.02:0,36,328	0/0:12,1:16:12.07:0,12,214	0/1:9,3:12:31.76:32,0,156	0/0:14,0:14:27.02:0,27,247	1/1:3,14:18:34.76:232,35,0	0/1:1,4:5:12.95:67,0,13	1/1:3,9:12:23.76:164,24,0	1/1:3,11:15:6.25:148,6,0	1/1:3,8:11:20.74:144,21,0	0/0:11,0:11:24.02:0,24,219	0/0:18,0:21:19.69:0,20,285	0/0:14,0:14:24.02:0,24,220	0/0:26,0:28:28.04:0,28,460	1/1:7,17:25:24.73:306,25,0	1/1:3,7:11:13.93:88,14,0	1/1:2,11:14:6.91:184,7,0
chr10	23225162	.	CTCCCTCTT	C	374.44	PASS	AB=0.907;AC=15;AF=0.536;AN=28;BaseQRankSum=-1.732;DP=80;FS=13.737;HRun=0;HaplotypeScore=48.1445;InbreedingCoeff=-0.2293;MQ=28.18;MQ0=15;MQRankSum=-0.840;QD=7.49;ReadPosRankSum=-1.365;VQSLOD=-0.3406;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:6,0:6:56.87:57,0,339	0/0:0,1:1:3.01:0,3,59	./.	./.	./.	0/1:1,2:3:28.98:29,0,47	./.	./.	./.	0/1:2,1:3:9.66:10,0,50	./.	./.	1/1:1,0:1:3.01:38,3,0	./.	0/1:6,0:6:22.08:22,0,425	0/1:6,0:6:9.97:10,0,297	1/1:4,0:4:7.57:71,8,0	./.	0/1:10,0:8:86.82:87,0,421	0/1:8,0:8:25.85:26,0,178	0/0:5,0:5:5.05:0,5,50	./.	./.	1/1:1,0:1:3.01:38,3,0	1/1:2,0:2:6.02:98,6,0	0/0:2,0:2:5.92:0,6,39	./.	./.
chr10	23225232	.	T	TC	3711.52	PASS	AC=44;AF=0.917;AN=48;BaseQRankSum=2.358;DP=166;FS=0.000;HRun=0;HaplotypeScore=54.9718;InbreedingCoeff=0.6166;MQ=38.45;MQ0=8;MQRankSum=-0.424;QD=32.00;ReadPosRankSum=1.260;VQSLOD=3.1744;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,2:3:8.32:68,8,0	1/1:0,4:4:12.04:182,12,0	0/0:23,0:4:8.84:0,9,106	0/0:25,0:8:11.99:0,12,138	1/1:1,8:9:19.53:248,20,0	1/1:1,1:2:6.02:73,6,0	./.	1/1:0,4:3:6.02:79,6,0	1/1:0,4:4:12.04:172,12,0	1/1:2,3:4:12:141,12,0	1/1:0,5:5:12.04:178,12,0	./.	1/1:1,7:8:21.07:301,21,0	1/1:1,1:2:5.95:61,6,0	1/1:5,3:8:21.04:232,21,0	1/1:1,6:7:21.03:257,21,0	1/1:2,0:2:6.01:57,6,0	./.	1/1:4,1:4:11.99:122,12,0	1/1:3,2:12:30.06:343,30,0	1/1:3,0:3:8.98:75,9,0	1/1:0,6:6:11.43:102,11,0	1/1:1,7:8:21.07:299,21,0	1/1:0,4:4:8.77:117,9,0	1/1:0,5:5:12.04:169,12,0	1/1:0,4:4:12.04:175,12,0	1/1:0,6:6:18.06:260,18,0	./.
chr10	23225236	.	C	CT	668.73	PASS	AB=0.938;AC=15;AF=0.313;AN=48;BaseQRankSum=1.038;DP=176;FS=30.822;HRun=6;HaplotypeScore=73.5863;InbreedingCoeff=0.3059;MQ=37.56;MQ0=10;MQRankSum=-0.697;QD=10.29;ReadPosRankSum=2.297;VQSLOD=0.3611;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:3,0:3:3.42:3,0,4	0/0:4,0:4:9.78:0,10,36	0/0:24,0:4:5.84:0,6,78	0/0:24,0:7:11.87:0,12,129	0/0:10,0:9:9.17:0,9,29	0/0:2,0:2:2.80:0,3,13	./.	0/1:5,0:3:8.34:10,0,8	0/0:6,0:6:10.81:0,11,48	0/0:5,0:4:8.92:0,9,77	0/1:7,0:7:11.79:12,0,14	./.	0/0:8,0:8:19.26:0,19,105	0/0:3,0:3:5.50:0,6,43	1/1:4,4:8:20.73:248,21,0	1/1:8,0:8:12.01:170,12,0	1/1:0,3:3:6.02:85,6,0	./.	0/1:3,1:3:11.70:38,0,12	0/1:7,3:10:1.40:152,0,1	1/1:0,3:3:6.02:85,6,0	0/1:6,0:6:4.42:4,0,6	0/1:8,0:8:7.67:8,0,46	0/0:5,0:5:4.18:0,4,13	0/0:6,0:6:9.08:0,9,30	0/0:4,0:4:7.92:0,8,48	0/0:6,0:6:7.55:0,8,37	./.
chr10	23225240	.	T	TTCCC	1064	PASS	AB=0.879;AC=15;AF=0.326;AN=46;BaseQRankSum=-2.099;DP=176;FS=26.068;HRun=0;HaplotypeScore=71.5971;InbreedingCoeff=0.4450;MQ=37.58;MQ0=13;MQRankSum=0.609;QD=22.64;ReadPosRankSum=2.894;VQSLOD=1.1008;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,0:3:2.50:9,2,0	0/0:4,0:4:5.98:0,6,47	0/0:25,0:3:2.68:0,3,50	0/0:29,0:7:3.01:0,3,50	0/0:10,0:9:2.99:0,3,24	0/0:2,0:2:2.99:0,3,24	0/0:3,0:3:1.25:0,1,3	0/1:5,0:4:0:0,0,0	0/0:6,0:6:6.87:0,7,51	0/0:5,0:4:6.10:0,6,33	0/0:7,0:7:0.89:0,1,2	./.	0/0:8,0:8:17.62:0,18,124	0/0:4,0:4:3.88:0,4,27	1/1:4,1:5:15.05:296,15,0	0/1:3,4:7:5.65:276,0,6	1/1:3,0:3:6.02:116,6,0	./.	1/1:5,0:4:3.01:63,3,0	1/1:9,1:10:15.05:326,15,0	1/1:3,0:3:6.02:112,6,0	./.	0/0:7,0:7:8.98:0,9,73	./.	0/1:6,0:6:2.32:2,0,21	0/0:3,0:3:9:0,9,78	0/0:4,0:4:11.99:0,12,102	./.
chr10	23225252	.	CTCCCTCTT	C	1368.79	PASS	AB=0.958;AC=20;AF=0.385;AN=52;BaseQRankSum=-0.182;DP=190;FS=3.489;HRun=0;HaplotypeScore=63.5248;InbreedingCoeff=0.4513;MQ=36.94;MQ0=19;MQRankSum=-2.395;QD=19.55;ReadPosRankSum=-1.366;VQSLOD=1.8074;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:5:2.92:0,3,209	1/1:4,0:4:8.66:71,9,0	0/0:20,0:2:3.01:0,3,48	0/0:26,0:3:2.64:0,3,22	0/1:7,0:6:2.85:20,0,3	1/1:4,0:4:6.91:80,7,0	1/1:4,0:4:2.90:16,3,0	0/1:4,1:4:0:0,0,0	0/0:6,0:6:0.18:0,0,11	0/0:4,0:3:6.96:0,7,32	0/0:9,0:9:1.25:0,1,3	./.	0/1:8,0:8:13.84:26,0,14	0/0:7,0:7:3.73:0,4,16	0/0:5,0:5:15.05:0,15,533	0/0:8,0:8:13.23:0,13,215	0/0:5,0:5:12.04:0,12,297	0/0:1,0:1:3.01:0,3,70	0/0:5,0:4:5.75:0,6,121	0/1:13,0:13:3.83:4,0,589	0/0:3,0:3:6.02:0,6,181	./.	0/0:7,0:7:8.26:0,8,37	1/1:6,0:6:12.04:163,12,0	1/1:3,3:6:15.05:292,15,0	1/1:3,3:6:18.06:391,18,0	1/1:2,4:6:18.06:421,18,0	1/1:1,0:1:3.01:45,3,0
chr10	23225256	.	CTCTT	C	2708.42	PASS	AB=0.839;AC=34;AF=0.630;AN=54;BaseQRankSum=0.464;DP=199;FS=9.051;HRun=0;HaplotypeScore=51.4127;InbreedingCoeff=0.6153;MQ=39.30;MQ0=21;MQRankSum=-1.406;QD=25.55;ReadPosRankSum=-0.237;VQSLOD=1.6841;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:6:8.25:0,8,167	1/1:1,2:3:9.03:156,9,0	0/0:20,0:2:2.85:0,3,48	0/0:28,0:3:3.01:0,3,34	1/1:4,2:5:12.04:211,12,0	1/1:3,1:4:12.04:173,12,0	1/1:0,4:4:3.01:55,3,0	0/1:2,0:2:0:0,0,0	1/1:1,5:6:9.03:171,9,0	1/1:0,3:3:9.03:171,9,0	1/1:2,6:8:3.01:54,3,0	./.	1/1:4,5:9:24.55:415,25,0	1/1:0,7:7:6.02:112,6,0	0/0:6,0:6:18.02:0,18,327	0/0:8,0:8:3.72:0,4,132	0/0:8,0:8:21.07:0,21,350	0/0:1,0:1:3.01:0,3,46	0/0:8,0:6:11.07:0,11,173	0/1:12,1:13:16.67:17,0,379	0/0:5,0:5:12.04:0,12,212	1/1:4,1:5:6.02:90,6,0	1/1:5,3:8:18.06:315,18,0	1/1:5,1:6:12.04:163,12,0	1/1:6,0:6:15.04:178,15,0	1/1:8,0:8:24.07:332,24,0	1/1:6,0:6:18.06:229,18,0	1/1:1,0:1:3.01:45,3,0
chr10	23225998	.	T	TTA	9684.33	PASS	AB=1.000;AC=53;AF=0.946;AN=56;BaseQRankSum=-0.198;DP=518;FS=0.772;HRun=0;HaplotypeScore=80.1494;InbreedingCoeff=0.4529;MQ=73.28;MQ0=0;MQRankSum=-4.741;QD=18.99;ReadPosRankSum=4.914;VQSLOD=5.0292;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,0:19:25.58:274,26,0	1/1:0,0:9:26.04:139,26,0	0/0:7,0:8:6.84:0,7,90	0/1:10,0:10:7.69:8,0,138	1/1:3,0:33:41.47:437,41,0	1/1:2,1:23:30.67:281,31,0	1/1:1,0:11:1.92:109,2,0	1/1:2,0:27:33.67:439,34,0	1/1:0,0:18:40.42:217,40,0	1/1:3,0:19:9.90:236,10,0	1/1:3,0:39:96.11:535,96,0	1/1:2,0:19:22:195,22,0	1/1:0,0:15:31.76:170,32,0	1/1:1,0:21:33.41:257,33,0	1/1:0,17:17:33.11:603,33,0	1/1:0,18:18:48.16:877,48,0	1/1:1,15:16:42.14:766,42,0	1/1:0,13:16:29.71:489,30,0	1/1:0,15:15:45.01:686,45,0	1/1:0,27:29:80.75:1135,81,0	1/1:0,3:3:9.03:164,9,0	1/1:2,0:20:3.48:177,3,0	1/1:0,0:18:43.35:232,43,0	1/1:0,0:7:20.24:108,20,0	1/1:0,0:18:40.50:217,40,0	1/1:1,0:25:66.80:390,67,0	1/1:0,0:37:89.51:480,90,0	1/1:0,0:8:12.08:63,12,0
chr10	23229511	.	T	TA	17745.84	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-7.655;DP=515;FS=8.689;HRun=4;HaplotypeScore=44.3989;InbreedingCoeff=0.9604;MQ=82.53;MQ0=0;MQRankSum=-8.252;QD=36.36;ReadPosRankSum=4.228;VQSLOD=4.6126;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,29:30:78.26:1067,78,0	1/1:2,8:10:24.08:328,24,0	0/0:11,0:11:27.08:0,27,306	0/0:16,0:16:45.07:0,45,477	1/1:2,16:18:42.10:553,42,0	1/1:0,13:13:36.12:493,36,0	1/1:1,11:12:27.09:369,27,0	1/1:5,30:35:90.29:1216,90,0	1/1:0,10:10:30.10:410,30,0	1/1:2,17:19:51.17:697,51,0	1/1:1,25:26:75.21:1005,75,0	1/1:1,14:15:39.13:534,39,0	1/1:3,17:20:54.18:737,54,0	1/1:0,17:17:51.17:698,51,0	1/1:1,21:21:60.20:821,60,0	1/1:1,17:18:51.17:698,51,0	1/1:0,21:21:57.19:779,57,0	1/1:1,4:5:12.04:164,12,0	1/1:3,17:20:54.16:722,54,0	1/1:1,28:29:84.24:1129,84,0	1/1:3,8:11:21.07:287,21,0	1/1:1,9:10:27.09:369,27,0	1/1:1,18:19:54.18:732,54,0	1/1:0,4:4:12.04:164,12,0	1/1:0,32:32:84.28:1149,84,0	1/1:2,30:32:90.30:1229,90,0	1/1:3,30:33:84.28:1149,84,0	1/1:1,6:7:18.06:246,18,0
chr10	23230090	.	TCTTCCTTCCTTCCTTC	T	20655.47	PASS	AB=1.000;AC=51;AF=0.911;AN=56;BaseQRankSum=0.332;DP=500;FS=1.514;HRun=0;HaplotypeScore=207.3669;InbreedingCoeff=0.4332;MQ=52.97;MQ0=1;MQRankSum=-1.740;QD=43.95;ReadPosRankSum=2.483;VQSLOD=4.0742;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,17:22:21.07:698,21,0	1/1:3,5:8:3.01:129,3,0	0/0:12,0:7:2.61:0,3,44	0/0:18,0:9:8.24:0,8,100	1/1:7,26:33:48.08:1640,48,0	1/1:6,21:27:27.09:1190,27,0	1/1:3,14:17:9.03:397,9,0	1/1:15,0:26:24.14:236,24,0	1/1:3,7:10:18.06:801,18,0	1/1:6,23:29:57.19:1777,57,0	1/1:3,17:20:39.13:1599,39,0	1/1:0,10:10:24.08:1034,24,0	1/1:4,16:20:30.10:1317,30,0	1/1:8,14:22:24.08:1068,24,0	1/1:2,0:11:18.06:666,18,0	1/1:5,0:13:18.06:670,18,0	1/1:5,5:10:3.01:35,3,0	0/1:10,0:10:19.26:71,0,19	1/1:8,4:11:12.04:383,12,0	1/1:1,21:22:38.94:951,39,0	1/1:3,4:7:6.02:248,6,0	1/1:9,13:22:30.03:1026,30,0	1/1:6,10:16:15.05:662,15,0	1/1:2,11:13:2.39:283,2,0	1/1:9,14:23:24.08:1054,24,0	1/1:1,0:17:35.14:732,35,0	1/1:6,0:33:45.15:1653,45,0	1/1:8,0:14:9.03:335,9,0
chr10	23230731	.	G	GA	1793.30	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-8.905;DP=552;FS=19.309;HRun=9;HaplotypeScore=82.0178;InbreedingCoeff=0.8830;MQ=71.19;MQ0=1;MQRankSum=-1.348;QD=21.10;ReadPosRankSum=-3.432;VQSLOD=1.7758;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,120,1008	0/0:8,0:8:20.99:0,21,182	0/0:24,0:18:22.93:0,23,250	0/0:21,0:13:18.35:0,18,152	0/0:30,0:30:80.58:0,81,686	0/0:19,0:18:53.73:0,54,454	0/0:2,0:2:6:0,6,52	1/1:6,21:27:63:676,63,0	0/0:10,0:10:20.46:0,20,181	0/0:24,0:24:71.92:0,72,613	0/0:24,0:24:53.72:0,54,454	0/0:9,0:9:20.99:0,21,182	0/0:17,0:17:38.53:0,39,318	0/0:15,0:15:41.81:0,42,348	0/0:13,0:14:5.64:0,6,256	0/0:20,0:20:56.96:0,57,490	0/0:35,0:35:74.95:0,75,651	0/0:17,0:17:17.63:0,18,283	0/0:18,0:22:48.54:0,49,379	0/0:26,1:27:41.80:0,42,592	0/0:8,0:8:23.96:0,24,200	0/0:18,0:18:44.99:0,45,390	0/0:20,0:20:56.57:0,57,474	0/0:15,0:15:32.98:0,33,293	0/0:23,0:23:65.97:0,66,571	1/1:5,21:26:40.12:649,40,0	1/1:4,24:28:33.94:586,34,0	1/1:1,1:2:3.01:33,3,0
chr10	23231703	.	A	AG	20899.09	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-2.379;DP=536;FS=11.453;HRun=1;HaplotypeScore=85.5810;InbreedingCoeff=0.9508;MQ=77.41;MQ0=0;MQRankSum=-6.784;QD=40.66;ReadPosRankSum=3.779;VQSLOD=4.5325;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,18:18:51.17:764,51,0	1/1:0,4:4:12.04:180,12,0	0/0:13,0:13:30.09:0,30,373	0/0:9,0:9:9.24:0,9,191	1/1:0,30:30:78.26:1169,78,0	1/1:0,20:20:57.19:854,57,0	1/1:0,13:13:36.12:540,36,0	1/1:3,30:33:93.30:1361,93,0	1/1:0,16:16:45.15:674,45,0	1/1:0,30:30:90.28:1324,90,0	1/1:2,31:33:90.30:1348,90,0	1/1:0,10:10:24.08:360,24,0	1/1:1,20:21:60.20:899,60,0	1/1:0,16:16:45.07:624,45,0	1/1:0,25:25:69.23:1034,69,0	1/1:0,20:20:57.19:854,57,0	1/1:0,17:17:45.15:662,45,0	1/1:1,20:21:51.17:763,51,0	1/1:0,16:16:48.15:698,48,0	1/1:2,22:24:60.20:899,60,0	1/1:0,8:8:21.07:315,21,0	1/1:0,12:12:30.10:450,30,0	1/1:0,16:16:39.13:585,39,0	1/1:0,10:10:27.09:405,27,0	1/1:1,28:29:78.26:1169,78,0	1/1:0,26:26:75.21:1079,75,0	1/1:2,23:25:66.22:989,66,0	1/1:0,21:21:60.20:898,60,0
chr10	23231831	.	AG	A	5383.32	PASS	AB=0.524;AC=13;AF=0.232;AN=56;BaseQRankSum=2.745;DP=571;FS=3.145;HRun=1;HaplotypeScore=113.7082;InbreedingCoeff=0.8927;MQ=70.41;MQ0=0;MQRankSum=-0.208;QD=37.65;ReadPosRankSum=1.470;VQSLOD=4.7515;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:63.20:0,63,981	0/0:5,0:5:15.05:0,15,239	0/0:8,0:8:21.07:0,21,334	0/0:9,0:9:24.04:0,24,311	0/0:30,0:30:90.29:0,90,1411	0/0:29,0:29:87.28:0,87,1365	0/0:13,0:13:39.12:0,39,597	0/0:25,0:25:75.23:0,75,1112	0/0:18,0:18:54.17:0,54,838	0/0:20,0:20:60.18:0,60,898	0/0:27,0:27:81.26:0,81,1266	0/0:24,0:24:72.23:0,72,1123	0/0:25,0:25:75.24:0,75,1172	0/0:20,0:20:59.41:0,59,913	1/1:0,27:27:78.26:1090,78,0	0/1:2,20:22:35.63:694,0,36	1/1:0,21:21:60.20:838,60,0	1/1:0,7:7:18.06:251,18,0	1/1:1,17:18:51.15:680,51,0	1/1:0,33:33:93.22:1266,93,0	1/1:0,15:15:42.10:565,42,0	0/0:10,0:10:30.09:0,30,455	0/0:23,0:23:69.24:0,69,1099	0/0:6,0:6:18.06:0,18,287	0/0:36,0:36:99:0,108,1701	0/0:26,0:26:78.26:0,78,1225	0/0:33,0:33:99:0,99,1537	0/0:20,0:20:60.14:0,60,881
chr10	23231947	.	T	TA	1573	PASS	AB=0.829;AC=12;AF=0.214;AN=56;BaseQRankSum=-3.201;DP=546;FS=1.706;HRun=2;HaplotypeScore=141.7060;InbreedingCoeff=0.5828;MQ=80.99;MQ0=0;MQRankSum=-4.589;QD=11.92;ReadPosRankSum=-1.183;VQSLOD=1.9324;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:40.28:0,40,248	0/0:4,0:4:11.61:0,12,65	0/0:22,0:22:52.19:0,52,617	0/1:8,0:8:5.82:6,0,231	0/0:32,0:32:82.11:0,82,499	0/0:26,0:26:66.40:0,66,381	0/0:12,0:12:28.73:0,29,184	0/0:30,0:30:83.08:0,83,664	0/0:12,0:12:31.55:0,32,200	0/0:24,0:24:67.99:0,68,517	0/0:26,0:26:53.34:0,53,345	0/0:18,0:18:52.46:0,52,307	0/0:18,0:18:52.51:0,53,328	0/0:17,0:17:45.95:0,46,272	1/1:6,18:25:45.80:487,46,0	0/1:18,2:20:19.98:58,0,20	1/1:4,21:25:29.54:461,30,0	0/1:3,7:10:11.78:59,0,12	1/1:8,3:11:4.02:153,4,0	1/1:6,18:24:22.47:459,22,0	0/1:7,2:9:6.35:57,0,6	0/0:9,0:9:26.17:0,26,161	0/0:28,0:28:49.09:0,49,295	0/0:15,0:15:41.55:0,42,254	0/0:22,0:22:61.53:0,62,420	0/0:29,0:29:73.34:0,73,516	0/0:37,0:36:96.91:0,97,626	0/0:11,0:11:30.17:0,30,164
chr10	23231950	.	G	GA	13316.58	PASS	AB=0.857;AC=49;AF=0.875;AN=56;BaseQRankSum=-0.504;DP=566;FS=6.805;HRun=8;HaplotypeScore=101.7439;InbreedingCoeff=0.5713;MQ=80.58;MQ0=0;MQRankSum=-6.942;QD=24.84;ReadPosRankSum=3.523;VQSLOD=4.9716;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,20:23:60.13:677,60,0	1/1:0,5:5:15:158,15,0	0/0:21,0:21:45.82:0,46,402	0/0:9,0:9:20.84:0,21,178	1/1:5,29:34:86.11:956,86,0	1/1:1,28:29:66.20:762,66,0	1/1:1,11:12:30.09:346,30,0	1/1:6,27:33:81.19:909,81,0	1/1:1,13:14:30.09:346,30,0	1/1:3,23:26:69.17:774,69,0	1/1:2,23:26:66.06:742,66,0	1/1:0,19:19:54.16:623,54,0	1/1:1,18:19:48.14:554,48,0	1/1:1,16:17:45.13:519,45,0	1/1:23,0:23:44.96:486,45,0	0/1:5,15:20:2.03:91,0,2	1/1:26,0:26:28.76:434,29,0	0/1:10,0:10:11.09:60,0,11	1/1:14,0:14:13.07:217,13,0	1/1:24,0:24:22.59:459,23,0	0/1:9,0:9:5.90:58,0,6	1/1:2,9:11:27.08:311,27,0	1/1:4,23:27:57.16:650,57,0	1/1:1,13:15:38.95:430,39,0	1/1:4,18:22:29.70:596,30,0	1/1:3,25:28:74.02:828,74,0	1/1:5,34:38:38.34:949,38,0	1/1:0,11:11:33.10:381,33,0
chr10	23235479	.	T	TAA	2997.76	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=1.945;DP=670;FS=2.497;HRun=0;HaplotypeScore=77.6481;InbreedingCoeff=0.9992;MQ=78.85;MQ0=0;MQRankSum=-0.210;QD=50.81;ReadPosRankSum=2.013;VQSLOD=4.2904;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:21:66.23:0,66,1076	0/0:13,0:13:39.12:0,39,602	0/0:15,0:15:45.13:0,45,641	0/0:16,0:16:45.15:0,45,702	0/0:28,0:28:81.26:0,81,1293	0/0:28,0:28:84.27:0,84,1342	0/0:30,0:30:87.28:0,87,1395	0/0:26,0:26:75.24:0,75,1176	0/0:22,0:22:66.23:0,66,1075	0/0:30,0:30:87.21:0,87,1320	0/0:18,0:18:51.16:0,51,807	0/0:28,0:28:81.28:0,81,1321	0/0:25,0:25:72.25:0,72,1175	0/0:17,0:17:51.13:0,51,760	1/1:0,30:30:78.27:1583,78,0	1/1:2,25:29:32.32:1536,32,0	0/0:18,0:18:54.17:0,54,847	0/0:10,0:10:27.09:0,27,431	0/0:24,0:24:66.23:0,66,1076	0/0:37,0:37:99:0,111,1811	0/0:16,0:16:48.16:0,48,783	0/0:30,0:30:87.30:0,87,1419	0/0:29,0:29:78.25:0,78,1248	0/0:26,0:26:78.27:0,78,1272	0/0:26,0:26:78.27:0,78,1270	0/0:26,0:26:78.27:0,78,1272	0/0:38,0:38:99:0,108,1695	0/0:13,0:13:39.13:0,39,636
chr10	23236224	.	T	TTA	7995.09	PASS	AC=50;AF=0.926;AN=54;BaseQRankSum=-4.126;DP=245;FS=0.000;HRun=0;HaplotypeScore=37.2411;InbreedingCoeff=0.4353;MQ=74.90;MQ0=1;MQRankSum=-1.574;QD=34.61;ReadPosRankSum=1.566;VQSLOD=6.6577;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,11:14:27.09:449,27,0	1/1:2,5:7:12.04:200,12,0	0/0:5,0:4:5.39:0,5,74	0/0:9,0:7:9.26:0,9,72	1/1:1,5:6:15.05:234,15,0	1/1:1,13:14:36.12:598,36,0	1/1:1,2:3:6.02:100,6,0	1/1:7,21:29:63.20:997,63,0	1/1:0,1:1:3.01:50,3,0	1/1:2,7:9:21.07:349,21,0	1/1:3,6:9:18.06:284,18,0	1/1:0,2:2:6.02:100,6,0	1/1:0,4:4:9.03:150,9,0	1/1:2,0:2:3.01:38,3,0	1/1:2,7:9:21.07:349,21,0	1/1:2,1:3:3.01:50,3,0	1/1:7,17:24:48.16:798,48,0	1/1:9,3:12:5.52:144,6,0	1/1:5,12:18:39.11:593,39,0	1/1:0,3:2:3.01:48,3,0	1/1:0,2:2:6.02:100,6,0	1/1:0,1:1:3.01:50,3,0	1/1:1,3:4:6.02:100,6,0	./.	1/1:2,12:14:36.12:599,36,0	1/1:1,11:12:33.11:543,33,0	1/1:4,7:11:15.05:249,15,0	1/1:1,17:18:51.17:827,51,0
chr10	23236951	.	CAG	C	5713.20	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=12.522;DP=672;FS=6.926;HRun=0;HaplotypeScore=86.7177;InbreedingCoeff=0.9995;MQ=89.69;MQ0=1;MQRankSum=-2.999;QD=37.84;ReadPosRankSum=2.487;VQSLOD=6.7035;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:93.30:0,93,1666	0/0:8,0:8:24.07:0,24,408	0/0:22,0:22:63.21:0,63,1108	0/0:31,0:31:87.24:0,87,1429	0/0:36,0:36:93.32:0,93,1702	0/0:35,0:35:96.31:0,96,1721	0/0:22,0:22:60.21:0,60,1093	0/0:25,0:25:72.25:0,72,1317	0/0:26,0:26:78.27:0,78,1430	0/0:21,0:21:63.21:0,63,1121	0/0:22,0:22:60.19:0,60,1070	0/0:30,0:30:87.30:0,87,1588	0/0:39,0:39:99:0,114,2070	0/0:30,0:30:87.30:0,87,1586	1/1:2,20:22:57.19:817,57,0	1/1:0,33:32:93.31:1332,93,0	1/1:0,11:11:30.10:430,30,0	1/1:0,13:13:36.12:515,36,0	1/1:1,20:21:60.20:858,60,0	1/1:2,24:26:63.21:902,63,0	1/1:1,24:25:60.20:860,60,0	0/0:18,0:18:42.14:0,42,762	0/0:20,0:20:60.21:0,60,1092	0/0:15,0:15:45.14:0,45,794	0/0:14,0:14:39.13:0,39,714	0/0:27,0:27:81.28:0,81,1482	0/0:35,0:35:99:0,102,1794	0/0:12,0:12:36.12:0,36,660
chr10	23237161	.	A	AG	23911.77	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=0.084;DP=591;FS=28.084;HRun=0;HaplotypeScore=110.3087;InbreedingCoeff=0.9893;MQ=67.27;MQ0=0;MQRankSum=-7.782;QD=42.40;ReadPosRankSum=2.600;VQSLOD=2.6860;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,10:12:32.98:454,33,0	1/1:0,14:14:42.14:653,42,0	0/0:14,0:14:23.24:0,23,417	0/0:13,0:13:30.09:0,30,390	1/1:5,43:48:99:1872,138,0	1/1:5,16:21:57.07:780,57,0	1/1:0,7:7:21:298,21,0	1/1:5,30:35:99:1567,102,0	1/1:2,16:18:51.17:781,51,0	1/1:4,37:41:99:1862,123,0	1/1:1,19:20:60.12:892,60,0	1/1:2,24:26:75.20:1102,75,0	1/1:4,20:23:63.20:936,63,0	1/1:3,14:17:48.06:744,48,0	1/1:0,14:14:42.14:632,42,0	1/1:3,29:30:93.25:1401,93,0	1/1:3,14:17:48.08:696,48,0	1/1:1,8:9:26.98:379,27,0	1/1:4,14:18:54.13:794,54,0	1/1:3,31:34:99:1471,99,0	1/1:1,8:9:17.99:252,18,0	1/1:2,22:24:71.99:1010,72,0	1/1:4,18:22:62.99:834,63,0	1/1:0,8:8:24:344,24,0	1/1:2,32:34:99:1519,102,0	1/1:4,24:28:81.27:1240,81,0	1/1:2,21:23:69.22:1037,69,0	1/1:4,5:9:23.92:366,24,0
chr10	23237184	.	TA	T	15711.56	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=3.523;DP=604;FS=16.189;HRun=7;HaplotypeScore=136.7222;InbreedingCoeff=0.9872;MQ=62.09;MQ0=0;MQRankSum=-6.628;QD=26.90;ReadPosRankSum=3.291;VQSLOD=3.2884;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,10:13:22.56:295,23,0	1/1:0,15:15:45.10:459,45,0	0/0:12,0:12:27.08:0,27,323	0/0:8,0:8:21.07:0,21,261	1/1:2,42:44:99:1184,117,0	1/1:2,20:22:57.13:581,57,0	1/1:2,6:8:18.04:183,18,0	1/1:9,29:38:93.15:923,93,0	1/1:2,10:12:30.07:306,30,0	1/1:2,39:41:99:1186,117,0	1/1:1,22:23:66.15:673,66,0	1/1:1,25:26:72.15:726,72,0	1/1:1,24:25:66.15:673,66,0	1/1:1,16:17:48.11:489,48,0	1/1:0,18:18:54.12:551,54,0	1/1:0,34:34:96.22:978,96,0	1/1:2,16:18:48.10:486,48,0	1/1:2,8:10:24.05:244,24,0	1/1:2,14:16:42.10:428,42,0	1/1:8,28:36:87.18:880,87,0	1/1:2,10:12:24.05:245,24,0	1/1:2,21:23:63.14:639,63,0	1/1:2,24:26:66.05:651,66,0	1/1:0,7:7:21.05:213,21,0	1/1:4,26:30:78.17:791,78,0	1/1:4,26:30:78.18:796,78,0	1/1:2,25:27:75.16:765,75,0	1/1:0,13:13:36.08:367,36,0
chr10	23237975	.	TTG	T	1816.93	PASS	AB=1.000;AC=42;AF=0.808;AN=52;BaseQRankSum=0.867;DP=403;FS=4.878;HRun=0;HaplotypeScore=86.7029;InbreedingCoeff=0.4043;MQ=64.79;MQ0=5;MQRankSum=-1.358;QD=5.77;ReadPosRankSum=2.608;VQSLOD=2.6701;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:5.99:0,6,48	1/1:5,0:5:8.86:56,9,0	0/0:34,0:19:8.98:0,9,76	0/0:22,0:19:29.64:0,30,225	1/1:21,0:21:11.90:84,12,0	1/1:15,0:15:8.95:65,9,0	1/1:9,0:9:14.81:98,15,0	1/1:36,0:36:56.98:498,57,0	1/1:17,0:17:17.28:113,17,0	1/1:22,0:22:27.51:178,28,0	1/1:16,0:16:14.65:96,15,0	1/1:3,5:8:2.88:15,3,0	1/1:11,0:11:11.85:80,12,0	1/1:10,0:9:6.84:45,7,0	1/1:11,2:14:5.84:34,6,0	1/1:3,0:10:2.92:17,3,0	1/1:3,0:4:2.92:17,3,0	./.	1/1:11,0:10:5.87:36,6,0	1/1:12,0:12:2.97:20,3,0	./.	1/1:10,0:10:5.98:48,6,0	1/1:10,0:10:8.88:58,9,0	1/1:16,0:16:10.66:80,11,0	1/1:15,0:14:8.89:58,9,0	0/1:26,0:26:53.87:208,0,54	0/1:16,0:16:7.57:55,0,8	0/0:0,12:12:0.47:0,0,1
chr10	23239196	.	TACAC	T	8657.53	PASS	AB=0.889;AC=33;AF=0.611;AN=54;BaseQRankSum=-2.548;DP=680;FS=11.656;HRun=0;HaplotypeScore=146.3964;InbreedingCoeff=0.8063;MQ=56.94;MQ0=14;MQRankSum=2.935;QD=23.09;ReadPosRankSum=3.379;VQSLOD=4.3143;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:51.11:0,51,735	1/1:7,0:7:21.07:306,21,0	0/0:43,0:24:40.05:0,40,554	0/0:45,0:19:32.82:0,33,424	1/1:2,13:15:6.02:71,6,0	1/1:30,5:33:68.07:930,68,0	1/1:22,1:21:35.93:567,36,0	1/1:34,0:33:72.20:1033,72,0	0/1:14,2:16:5.39:348,0,5	1/1:8,13:21:4.38:512,4,0	./.	1/1:21,2:23:28.55:632,29,0	1/1:25,3:27:34.40:760,34,0	1/1:23,3:26:26.10:678,26,0	0/0:26,0:26:54.08:0,54,847	0/0:28,0:28:53.21:0,53,737	0/0:35,0:34:83.46:0,83,1255	0/0:16,0:16:38.94:0,39,546	0/0:12,0:12:33.09:0,33,551	0/0:18,0:18:36.10:0,36,606	0/0:39,0:39:84.02:0,84,1431	1/1:23,2:23:5.96:50,6,0	1/1:8,9:16:2.60:10,3,0	1/1:31,0:30:4.55:596,5,0	1/1:20,2:22:33.91:585,34,0	1/1:22,0:22:57.17:829,57,0	1/1:18,3:21:0.15:372,0,0	1/1:7,2:9:27:380,27,0
chr10	23239210	.	CAT	C	5859.15	PASS	AB=0.997;AC=42;AF=0.750;AN=56;BaseQRankSum=7.871;DP=707;FS=15.687;HRun=0;HaplotypeScore=152.0664;InbreedingCoeff=0.3058;MQ=51.90;MQ0=19;MQRankSum=2.443;QD=8.93;ReadPosRankSum=-1.890;VQSLOD=2.9949;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:36,0:35:3.29:3,0,291	1/1:9,0:9:23.91:185,24,0	0/1:34,0:15:13.30:13,0,174	0/1:36,0:9:1.07:1,0,85	1/1:20,0:20:20.79:153,21,0	1/1:46,0:43:89.92:669,90,0	1/1:31,0:29:58.90:465,59,0	0/1:35,0:33:32.41:356,0,32	1/1:18,0:18:31.69:244,32,0	1/1:22,0:22:59.62:470,60,0	1/1:12,0:12:11.95:92,12,0	1/1:24,0:23:54.02:388,54,0	1/1:28,0:27:71.66:520,72,0	1/1:23,0:23:54.75:421,55,0	0/1:27,0:27:57.32:57,0,353	0/0:27,0:27:33.71:0,34,332	0/1:40,0:39:17.83:18,0,407	0/0:14,0:14:6.20:0,6,235	0/0:10,0:10:29.76:0,30,281	0/1:18,0:18:11.04:11,0,260	0/1:44,0:44:7.55:8,0,562	1/1:7,21:25:3.01:45,3,0	1/1:14,0:13:5.78:47,6,0	1/1:36,0:35:61.16:493,61,0	1/1:19,0:19:50.06:368,50,0	1/1:23,0:22:54.49:395,54,0	1/1:20,0:20:34.37:220,34,0	1/1:10,2:12:29.74:215,30,0
chr10	23239212	.	TACAC	T	1653	PASS	AB=0.956;AC=30;AF=0.577;AN=52;BaseQRankSum=-1.667;DP=700;FS=11.988;HRun=0;HaplotypeScore=184.4588;InbreedingCoeff=0.3547;MQ=51.57;MQ0=19;MQRankSum=2.453;QD=3.88;ReadPosRankSum=-2.435;VQSLOD=1.2928;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:34:7.64:0,8,69	1/1:9,0:9:8.85:66,9,0	./.	./.	1/1:20,0:21:14.23:129,14,0	1/1:41,3:42:33.19:239,33,0	1/1:30,1:29:14.78:130,15,0	0/1:35,0:32:7.45:7,0,14	0/1:14,3:17:1.42:190,0,1	0/1:23,0:23:3.31:146,0,3	1/1:12,0:12:10.45:99,10,0	0/0:20,0:21:1.58:0,2,35	1/1:26,1:27:1.34:110,1,0	0/1:20,3:23:10.34:29,0,10	1/1:26,0:27:12.73:160,13,0	0/0:20,6:26:5.50:0,6,45	0/0:36,0:36:59.20:0,59,702	0/0:15,0:15:15.79:0,16,170	0/0:11,0:11:3.01:0,3,67	0/0:18,0:18:8.99:0,9,138	0/0:44,0:44:36.03:0,36,500	1/1:30,0:27:5.21:32,5,0	1/1:14,0:13:3.01:41,3,0	0/1:36,0:35:18.58:131,0,19	1/1:18,2:20:4.52:73,5,0	1/1:23,0:22:2.39:30,2,0	0/1:19,0:19:32.30:63,0,32	1/1:13,0:13:15.43:146,15,0
chr10	23239253	.	ACACACAAAC	A	1213.47	PASS	AB=0.986;AC=5;AF=0.089;AN=56;BaseQRankSum=3.875;DP=669;FS=33.205;HRun=0;HaplotypeScore=192.2846;InbreedingCoeff=0.3380;MQ=62.48;MQ0=34;MQRankSum=-0.849;QD=13.63;ReadPosRankSum=-1.330;VQSLOD=1.4453;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:5.59:0,6,941	0/0:11,0:11:26.18:0,26,519	0/0:38,0:18:24.10:0,24,905	0/0:46,0:24:68.92:0,69,1227	0/0:22,0:22:41.92:0,42,902	0/0:35,0:34:82.53:0,83,1328	0/0:22,0:20:49.61:0,50,889	0/1:27,0:24:32.19:402,0,32	0/0:22,0:22:57.08:0,57,1002	0/0:28,0:28:68.06:0,68,1390	0/0:11,0:11:27.09:0,27,557	0/0:15,0:14:29.21:0,29,672	0/0:18,0:17:28.92:0,29,794	0/0:22,0:22:59.93:0,60,1232	0/0:29,0:29:77.37:0,77,1573	0/0:21,0:21:40.36:0,40,771	0/0:44,0:44:99:0,104,2761	0/0:14,0:14:36.97:0,37,784	0/0:9,0:9:26.94:0,27,498	0/0:17,0:17:39.13:0,39,959	0/0:44,0:43:93.37:0,93,2430	0/0:20,0:18:32.81:0,33,573	0/0:14,0:13:24.07:0,24,435	0/0:26,0:25:54.61:0,55,1156	0/0:26,0:26:72.88:0,73,1346	0/1:21,0:14:41.58:329,0,42	0/1:22,1:18:9.26:236,0,9	1/1:15,3:15:13.15:367,13,0
chr10	23239255	.	ACACAAAC	A	1553.29	PASS	AB=0.940;AC=6;AF=0.107;AN=56;BaseQRankSum=3.905;DP=666;FS=73.746;HRun=0;HaplotypeScore=172.9223;InbreedingCoeff=0.6621;MQ=64.28;MQ0=34;MQRankSum=-0.436;QD=17.07;ReadPosRankSum=-3.041;VQSLOD=0.1431;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:50.88:0,51,956	0/0:10,0:10:24.02:0,24,471	0/0:39,0:19:26.86:0,27,953	0/0:47,0:25:71.93:0,72,1256	0/0:22,0:22:42.29:0,42,848	0/0:32,0:31:66.17:0,66,1086	0/0:22,0:20:52.60:0,53,818	1/1:29,0:26:12.27:620,12,0	0/0:22,0:22:53.14:0,53,849	0/0:28,0:28:49.03:0,49,1253	0/0:10,0:10:27.06:0,27,473	0/0:16,0:15:33.50:0,34,723	0/0:19,0:18:40.77:0,41,778	0/0:21,0:21:54.26:0,54,1109	0/0:30,0:30:31.58:0,32,1466	0/0:20,0:20:37.01:0,37,753	0/0:44,0:44:99:0,102,2381	0/0:14,0:14:39.93:0,40,727	0/0:9,0:9:26.76:0,27,491	0/0:18,0:18:42.13:0,42,931	0/0:45,0:44:96.40:0,96,2128	0/0:20,0:18:38.96:0,39,629	0/0:15,0:14:27.07:0,27,465	0/0:24,0:23:54.15:0,54,972	0/0:26,0:26:72.17:0,72,1327	0/1:23,0:16:33.98:420,0,34	0/1:19,3:17:4.79:286,0,5	1/1:7,10:14:14.35:359,14,0
chr10	23239259	.	AAAC	A	1462.77	PASS	AB=0.649;AC=7;AF=0.125;AN=56;BaseQRankSum=3.336;DP=662;FS=29.193;HRun=0;HaplotypeScore=127.9997;InbreedingCoeff=0.8247;MQ=70.48;MQ0=33;MQRankSum=0.750;QD=16.62;ReadPosRankSum=-1.791;VQSLOD=1.2834;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:51.64:0,52,994	0/0:9,0:9:27.09:0,27,513	0/0:42,0:22:34.61:0,35,1109	0/0:52,0:30:86.94:0,87,1531	0/0:17,0:17:45.12:0,45,817	0/0:29,0:28:71.02:0,71,1118	0/0:24,0:22:58.50:0,58,924	1/1:4,21:22:48.10:735,48,0	0/0:19,0:19:50.99:0,51,815	0/0:24,0:24:68.55:0,69,1250	0/0:11,0:11:29.83:0,30,518	0/0:17,0:16:36.12:0,36,749	0/0:20,0:20:57.02:0,57,1012	0/0:22,0:22:60.20:0,60,1169	0/0:32,0:32:89.62:0,90,1710	0/0:21,0:21:39.13:0,39,784	0/0:45,0:45:90.64:0,91,1709	0/0:12,0:12:30.05:0,30,507	0/0:11,0:11:33.10:0,33,572	0/0:17,0:17:39.12:0,39,773	0/0:44,0:43:79.17:0,79,1508	0/0:20,0:18:44.97:0,45,741	0/0:14,0:13:33.09:0,33,568	0/0:25,0:24:57.05:0,57,997	0/0:28,0:28:75.61:0,76,1415	0/1:11,13:17:29.22:431,0,29	1/1:12,10:17:14.87:222,15,0	1/1:17,0:14:15.05:221,15,0
chr10	23239950	.	C	CA	1853.57	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-10.896;DP=611;FS=30.848;HRun=5;HaplotypeScore=62.2968;InbreedingCoeff=0.9905;MQ=88.06;MQ0=1;MQRankSum=-2.287;QD=31.96;ReadPosRankSum=1.971;VQSLOD=1.6003;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:78.16:0,78,828	0/0:11,0:11:33.08:0,33,355	0/0:24,0:24:57.04:0,57,567	0/0:19,0:19:45.06:0,45,457	0/0:33,0:33:93.13:0,93,982	0/0:25,0:25:75.18:0,75,801	0/0:19,0:19:54.12:0,54,572	0/0:25,0:25:69.16:0,69,730	0/0:12,0:12:36.09:0,36,387	0/0:23,0:23:57.10:0,57,600	0/0:18,0:18:48.09:0,48,504	0/0:27,0:27:78.18:0,78,830	0/0:23,0:23:65.98:0,66,682	0/0:22,0:22:60.15:0,60,645	1/1:0,35:35:90.76:1186,91,0	1/1:2,21:23:60.20:790,60,0	0/0:13,0:13:36.09:0,36,387	0/0:18,0:17:42.07:0,42,451	0/0:21,0:21:41.87:0,42,425	0/0:34,0:34:90.20:0,90,950	0/0:11,0:11:24.06:0,24,257	0/0:17,0:17:48.12:0,48,515	0/0:19,0:19:51.13:0,51,547	0/0:16,0:16:42.10:0,42,451	0/0:25,0:25:75.18:0,75,800	0/0:33,0:33:90.20:0,90,948	0/0:29,0:29:87.22:0,87,934	0/0:5,0:5:15.04:0,15,161
chr10	23240263	.	A	ATT	21036.99	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-5.114;DP=671;FS=2.455;HRun=6;HaplotypeScore=85.6063;InbreedingCoeff=0.9931;MQ=81.34;MQ0=1;MQRankSum=-9.065;QD=33.08;ReadPosRankSum=5.478;VQSLOD=4.5432;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,0:22:44.92:158,45,0	1/1:2,10:12:24.08:406,24,0	0/0:20,0:20:50.51:0,51,585	0/0:15,0:15:35.47:0,35,432	1/1:5,32:36:93.32:1558,93,0	1/1:4,30:36:90.31:1522,90,0	1/1:3,19:22:54.18:913,54,0	1/1:9,36:45:99:1727,105,0	1/1:0,11:11:30.10:507,30,0	1/1:1,33:34:99:1647,99,0	1/1:3,26:29:75.21:1238,75,0	1/1:1,15:16:42.14:710,42,0	1/1:1,22:24:54.18:907,54,0	1/1:2,18:21:45.15:761,45,0	1/1:2,0:20:42.42:149,42,0	1/1:4,0:27:57.39:202,57,0	1/1:0,0:13:32.44:114,32,0	1/1:2,0:17:34.93:123,35,0	1/1:2,0:25:57.89:218,58,0	1/1:3,0:41:94.82:333,95,0	1/1:1,0:8:17.47:61,17,0	1/1:0,30:30:90.26:1492,90,0	1/1:3,19:22:54.18:913,54,0	1/1:1,10:11:27.09:457,27,0	1/1:1,28:29:69.24:1165,69,0	1/1:0,30:30:90.31:1522,90,0	1/1:4,28:34:78.23:1319,78,0	1/1:1,19:20:54.18:913,54,0
chr10	23241498	.	TG	T	3147.54	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=13.297;DP=461;FS=6.366;HRun=2;HaplotypeScore=51.9235;InbreedingCoeff=0.9858;MQ=76.34;MQ0=0;MQRankSum=1.452;QD=34.21;ReadPosRankSum=0.311;VQSLOD=3.4100;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:69.19:0,69,1003	0/0:5,0:5:15.04:0,15,206	0/0:9,0:9:24.05:0,24,286	0/0:11,0:11:30.04:0,30,393	0/0:20,0:20:57.19:0,57,851	0/0:20,0:20:60.20:0,60,894	0/0:18,0:18:54.16:0,54,770	0/0:25,0:25:72.24:0,72,1074	0/0:16,0:16:48.14:0,48,680	0/0:21,0:21:60.20:0,60,878	0/0:21,0:21:63.21:0,63,941	0/0:16,0:16:48.16:0,48,716	0/0:17,0:17:45.13:0,45,652	0/0:12,0:12:36.12:0,36,539	1/1:0,13:13:39.13:506,39,0	1/1:0,12:12:30.10:390,30,0	1/1:0,12:12:33.11:428,33,0	1/1:0,18:18:51.17:662,51,0	1/1:0,17:17:51.16:657,51,0	1/1:0,17:17:45.15:584,45,0	1/1:0,3:3:9.03:117,9,0	0/0:12,0:12:36.12:0,36,539	0/0:15,0:15:45.13:0,45,634	0/0:15,0:15:45.15:0,45,674	0/0:26,0:26:78.26:0,78,1151	0/0:16,0:16:48.15:0,48,696	0/0:36,0:35:99:0,108,1610	0/0:15,0:15:45.15:0,45,674
chr10	23241762	.	G	GA	3767.87	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-12.422;DP=438;FS=5.966;HRun=7;HaplotypeScore=38.0132;InbreedingCoeff=0.9579;MQ=70.12;MQ0=0;MQRankSum=-0.365;QD=30.39;ReadPosRankSum=1.328;VQSLOD=3.7163;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,17:17:45.14:542,45,0	0/0:10,0:10:27.01:0,27,253	0/0:9,0:9:18:0,18,166	0/0:7,0:6:15.02:0,15,145	0/0:24,0:24:69.07:0,69,650	0/0:21,0:21:60.08:0,60,574	0/0:11,0:11:30.05:0,30,290	0/0:25,0:25:63.07:0,63,595	0/0:16,1:17:11.82:0,12,392	0/0:18,0:18:51.08:0,51,493	0/0:21,0:21:51.07:0,51,488	0/0:18,0:18:51.08:0,51,492	0/0:17,0:17:51.08:0,51,492	0/0:14,0:15:44.09:0,44,406	1/1:1,13:13:30.09:362,30,0	1/1:1,16:17:19.17:515,19,0	1/1:2,15:17:45.14:544,45,0	1/1:4,13:17:42.13:507,42,0	1/1:2,13:15:13.13:429,13,0	1/1:2,18:20:54.17:652,54,0	1/1:1,6:7:18.06:217,18,0	0/0:4,0:4:12.02:0,12,116	0/0:10,0:10:27.02:0,27,255	0/0:4,0:4:12.02:0,12,116	0/0:21,0:21:57.09:0,57,550	0/0:12,0:12:6.57:0,7,263	0/0:29,0:29:87.12:0,87,834	0/0:21,0:21:45.94:0,46,436
chr10	23242265	.	TGTGC	T	288.26	PASS	AB=0.974;AC=18;AF=0.321;AN=56;BaseQRankSum=-0.633;DP=527;FS=6.779;HRun=0;HaplotypeScore=200.6096;InbreedingCoeff=-0.2198;MQ=41.65;MQ0=4;MQRankSum=1.166;QD=0.96;ReadPosRankSum=-4.002;VQSLOD=1.2434;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:1.78:0,2,6	0/1:8,0:8:38.62:39,0,46	0/0:10,0:4:11.77:0,12,126	0/0:14,0:6:9.02:0,9,100	0/0:21,0:21:12.92:0,13,99	0/0:26,0:26:6.20:0,6,60	0/1:19,0:18:20.81:21,0,76	0/1:26,0:25:59.70:60,0,200	0/0:11,0:11:3.48:0,3,34	0/1:32,0:31:10.16:10,0,449	0/0:15,0:15:16.89:0,17,129	0/0:12,0:12:5.77:0,6,45	0/1:19,0:19:25.66:26,0,125	0/0:24,0:24:8.74:0,9,80	1/1:14,0:13:0.47:1,0,0	0/1:20,2:22:25.89:40,0,26	0/1:13,4:17:57.40:73,0,57	0/0:25,0:24:2.20:0,2,214	0/1:11,0:10:5.51:6,0,118	0/1:18,0:17:17.78:18,0,35	0/1:9,1:9:11.98:19,0,12	0/1:21,0:21:0.02:0,0,0	1/1:18,0:18:5.99:49,6,0	0/0:23,0:23:11.73:0,12,99	0/0:23,0:23:8.23:0,8,84	0/1:38,0:38:47.71:48,0,405	0/1:14,0:13:19.33:19,0,46	0/1:14,0:13:3.35:3,0,70
chr10	23242267	.	TGCGCGC	T	1079.50	PASS	AB=0.967;AC=19;AF=0.339;AN=56;BaseQRankSum=-6.054;DP=517;FS=2.947;HRun=0;HaplotypeScore=203.3072;InbreedingCoeff=-0.2693;MQ=39.85;MQ0=4;MQRankSum=-0.096;QD=3.17;ReadPosRankSum=-4.081;VQSLOD=1.7766;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:1.54:0,2,5	0/1:8,0:8:19.72:20,0,103	0/0:8,0:3:8.98:0,9,140	0/0:14,0:6:8.97:0,9,78	0/1:19,0:19:54.81:82,0,55	0/1:24,2:26:33:63,0,33	0/1:16,2:17:52.12:114,0,52	0/1:26,0:25:90.08:90,0,193	0/1:9,1:11:18.54:19,0,32	0/1:32,0:31:99:168,0,640	1/1:14,0:14:5.72:49,6,0	0/0:11,1:12:2.97:0,3,38	0/0:19,0:19:17.64:0,18,244	0/1:24,0:24:17.51:18,0,66	1/1:14,0:13:0.47:1,0,0	0/0:23,0:23:12.47:0,12,145	0/0:16,0:17:23.84:0,24,285	0/0:25,0:24:1.93:0,2,276	0/0:11,0:10:8.26:0,8,161	0/1:18,0:17:2.21:76,0,2	0/0:10,0:9:2.41:0,2,24	0/1:18,2:20:0.07:0,0,0	0/0:17,0:17:5.13:0,5,34	0/1:20,2:22:12.71:13,0,189	0/1:22,1:23:48.20:82,0,48	0/1:38,1:39:99:343,0,674	0/1:13,0:12:22.24:22,0,132	0/1:14,0:13:35.21:66,0,35
chr10	23242279	.	C	CAT	1400.88	PASS	AB=0.738;AC=26;AF=0.481;AN=54;BaseQRankSum=-1.248;DP=488;FS=0.000;HRun=0;HaplotypeScore=200.9415;InbreedingCoeff=0.5516;MQ=40.78;MQ0=7;MQRankSum=-0.121;QD=5.43;ReadPosRankSum=1.869;VQSLOD=2.8715;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:0:0,0,0	1/1:3,1:8:8.77:133,9,0	0/1:5,0:3:5.53:6,0,59	./.	1/1:5,11:18:3.01:50,3,0	1/1:10,10:20:2.24:9,2,0	0/1:8,12:21:13.08:131,0,13	0/0:24,0:24:42.92:0,43,475	1/1:6,5:11:3:27,3,0	1/1:20,6:27:49.20:533,49,0	0/1:6,4:10:0.23:0,0,0	1/1:7,6:13:5.89:102,6,0	1/1:11,1:14:20.94:279,21,0	1/1:12,14:27:2.08:7,2,0	0/0:8,0:9:2.98:0,3,22	0/0:17,0:19:18.48:0,18,157	0/0:18,0:18:29.40:0,29,187	0/0:21,0:21:40.56:0,41,366	0/0:13,0:12:6.24:0,6,213	0/0:23,0:22:3.86:0,4,23	0/0:16,0:15:8.95:0,9,90	0/1:9,13:22:0.02:0,0,0	1/1:11,3:17:8.60:107,9,0	1/1:7,13:20:8.98:121,9,0	1/1:8,15:23:2.73:64,3,0	0/0:34,0:33:74.30:0,74,771	0/0:8,0:8:15.03:0,15,170	0/0:14,0:12:16.84:0,17,122
chr10	23242293	.	C	CGT	2495.51	PASS	AB=0.921;AC=28;AF=0.500;AN=56;BaseQRankSum=5.256;DP=542;FS=4.421;HRun=0;HaplotypeScore=172.4017;InbreedingCoeff=-0.1521;MQ=48.65;MQ0=7;MQRankSum=-0.369;QD=5.65;ReadPosRankSum=6.084;VQSLOD=2.4344;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:8,2:29:0.11:0,0,0	0/1:9,0:9:8.28:56,0,8	0/0:6,0:3:8.01:0,8,52	0/1:12,0:8:40.61:41,0,102	0/1:22,0:22:16.66:17,0,47	0/0:20,0:20:13.29:0,13,89	0/1:23,0:22:57.35:57,0,90	0/1:20,0:20:84.61:126,0,85	0/0:14,0:14:17.02:0,17,130	0/1:27,0:26:99:145,0,163	0/0:9,0:9:5.72:0,6,46	0/1:16,0:16:34.22:49,0,34	0/1:21,0:21:96.36:96,0,152	0/0:31,0:31:26.11:0,26,200	1/1:13,1:13:23.99:247,24,0	1/1:15,5:20:35.85:439,36,0	1/1:5,16:21:12.88:438,13,0	0/1:8,13:22:33.20:218,0,33	1/1:18,2:19:16.75:264,17,0	1/1:11,12:23:6.02:86,6,0	0/1:9,16:24:30.59:31,0,77	0/0:20,0:20:8.70:0,9,59	0/1:19,0:19:30.56:31,0,53	0/1:24,0:24:29.56:30,0,82	0/1:24,0:24:15.46:15,0,63	0/1:30,0:29:99:202,0,166	0/1:9,0:9:20.50:50,0,20	1/1:10,0:8:7.01:31,7,0
chr10	23242295	.	C	CGTGT	4465.51	PASS	AB=1.000;AC=24;AF=0.429;AN=56;BaseQRankSum=-0.423;DP=561;FS=14.101;HRun=0;HaplotypeScore=187.2502;InbreedingCoeff=0.6484;MQ=51.04;MQ0=7;MQRankSum=-2.511;QD=16.24;ReadPosRankSum=2.050;VQSLOD=3.7437;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:31,0:31:6.86:42,7,0	0/1:9,0:9:8.30:8,0,42	0/0:11,0:7:9.01:0,9,117	0/1:15,0:10:90.55:91,0,235	0/0:20,0:20:16.27:0,16,173	0/0:22,0:22:14.69:0,15,181	0/0:26,0:25:13.06:0,13,275	1/1:20,1:21:31.77:519,32,0	0/0:12,0:12:15.05:0,15,235	0/0:28,0:27:41.44:0,41,410	0/0:8,0:8:8.76:0,9,102	0/0:17,0:17:15.97:0,16,153	0/0:23,0:23:44.76:0,45,474	0/0:30,0:30:23.31:0,23,367	1/1:15,0:14:24.05:383,24,0	1/1:19,0:19:36.11:504,36,0	1/1:23,0:23:33.74:359,34,0	0/1:23,0:23:49.34:166,0,49	1/1:22,0:21:40.50:533,41,0	1/1:24,0:23:6.01:61,6,0	0/1:24,0:23:40.71:57,0,41	0/0:21,0:21:11.95:0,12,146	0/0:18,0:19:17.54:0,18,172	0/0:24,0:24:23.29:0,23,264	0/0:25,0:25:22.96:0,23,249	1/1:10,18:29:40.24:1175,40,0	1/1:7,1:8:15.05:317,15,0	1/1:11,0:9:12.04:251,12,0
chr10	23243344	.	T	TCTTCCTTC	10625.25	PASS	AB=0.908;AC=42;AF=0.778;AN=54;BaseQRankSum=-4.377;DP=534;FS=1.267;HRun=0;HaplotypeScore=199.3718;InbreedingCoeff=0.5786;MQ=46.89;MQ0=7;MQRankSum=-1.159;QD=24.94;ReadPosRankSum=2.435;VQSLOD=4.6565;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:19,0:20:44.12:44,0,254	1/1:13,1:13:24.07:461,24,0	0/0:8,0:3:3.01:0,3,47	./.	1/1:21,0:20:42.11:734,42,0	1/1:22,1:23:39.10:718,39,0	1/1:20,0:19:16.68:461,17,0	0/0:37,0:37:54.12:0,54,846	1/1:13,0:11:18.05:336,18,0	1/1:25,0:25:51.17:1141,51,0	1/1:20,0:19:48.14:861,48,0	1/1:20,0:20:36.11:585,36,0	1/1:17,0:17:30.09:560,30,0	1/1:23,0:23:48.14:841,48,0	1/1:15,0:14:30.56:551,31,0	1/1:25,0:22:16.45:211,16,0	1/1:19,0:18:26.81:421,27,0	0/1:13,0:12:1.22:86,0,1	1/1:26,0:26:36.44:555,36,0	1/1:22,0:22:48.13:794,48,0	1/1:6,0:6:9.03:145,9,0	1/1:5,6:14:15.52:228,16,0	1/1:11,4:18:3.01:124,3,0	0/1:4,6:12:0:0,0,0	1/1:7,16:23:12.04:347,12,0	0/0:24,0:23:30.06:0,30,491	0/0:31,0:30:13.43:0,13,314	0/1:14,0:14:79.53:422,0,80
chr10	23243372	.	CAGTTA	C	1327.78	PASS	AB=0.860;AC=14;AF=0.250;AN=56;BaseQRankSum=7.130;DP=488;FS=13.822;HRun=0;HaplotypeScore=139.2863;InbreedingCoeff=-0.3227;MQ=59.66;MQ0=1;MQRankSum=-8.708;QD=5.31;ReadPosRankSum=-4.415;VQSLOD=0.0455;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:14,3:17:89.38:89,0,1101	0/0:11,3:14:30.10:0,30,929	0/0:17,0:10:30.09:0,30,671	0/0:13,0:6:14.08:0,14,356	0/1:22,1:22:21.19:21,0,1843	0/1:18,5:22:99:118,0,1382	0/1:12,2:14:96.53:97,0,1075	0/0:34,0:34:99:0,102,2567	0/0:11,1:10:30.10:0,30,957	0/1:22,2:24:78.05:78,0,1767	0/1:18,3:21:81.58:82,0,1636	0/1:13,4:17:99:157,0,1222	0/0:12,2:14:36.12:0,36,1111	0/1:16,1:17:19.59:20,0,1408	0/1:8,5:13:99:239,0,738	0/1:17,5:19:99:218,0,1389	0/0:16,1:17:35.20:0,35,1320	0/1:4,0:6:3.20:3,0,358	0/0:16,0:16:48.16:0,48,1553	0/0:26,0:26:78.27:0,78,2449	0/0:3,0:3:9.03:0,9,299	0/1:15,1:15:1.87:2,0,1088	0/0:13,0:13:5.08:0,5,696	0/0:12,0:12:21:0,21,553	0/1:20,1:21:83.95:84,0,546	0/0:19,0:18:54.19:0,54,1503	0/0:28,0:27:81.28:0,81,2248	0/1:12,3:16:99:269,0,622
chr10	23243916	.	T	TCTGTTTACAGAAAAGTA	7338.33	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-2.722;DP=661;FS=4.248;HRun=0;HaplotypeScore=274.8650;InbreedingCoeff=0.9950;MQ=85.71;MQ0=0;MQRankSum=-9.666;QD=116.48;ReadPosRankSum=1.196;VQSLOD=4.3637;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:54.19:0,54,2315	0/0:7,0:7:18.06:0,18,791	0/0:24,0:24:45.07:0,45,1278	0/0:21,0:21:36.12:0,36,1511	0/0:25,0:25:57.20:0,57,2616	0/0:33,0:33:84.27:0,84,3282	0/0:25,0:25:66.20:0,66,2436	0/0:30,0:30:72.22:0,72,2413	0/0:22,0:22:63.14:0,63,2317	0/0:26,0:26:60.16:0,60,2315	0/0:28,0:28:72.22:0,72,2972	0/0:31,0:31:84.25:0,84,3507	0/0:32,0:32:90.31:0,90,3797	0/0:34,0:34:90.25:0,90,3433	1/1:14,19:36:66.23:4689,66,0	1/1:9,17:27:36.12:2650,36,0	0/0:14,0:14:33.09:0,33,1393	0/0:18,0:18:42.14:0,42,1834	0/0:16,0:16:27.07:0,27,833	0/0:21,0:21:51.16:0,51,2218	0/0:21,0:21:57.15:0,57,2350	0/0:30,0:30:78.25:0,78,3076	0/0:22,0:22:57.20:0,57,2450	0/0:18,0:18:51.16:0,51,2211	0/0:21,0:21:57.20:0,57,2684	0/0:19,0:19:48.16:0,48,1954	0/0:23,0:23:66.21:0,66,2748	0/0:16,0:16:39.13:0,39,1530
chr10	23244787	.	CAGTT	C	10937.12	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=16.563;DP=561;FS=0.000;HRun=0;HaplotypeScore=132.8066;InbreedingCoeff=0.9936;MQ=74.82;MQ0=1;MQRankSum=-13.114;QD=48.18;ReadPosRankSum=0.272;VQSLOD=5.0533;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:60.21:0,60,1611	1/1:1,7:8:21.07:398,21,0	0/0:14,0:14:24.49:0,24,950	0/0:21,0:17:31.29:0,31,706	1/1:5,20:25:66.21:1213,66,0	1/1:5,23:29:84.27:1548,84,0	1/1:5,4:9:18.06:338,18,0	0/0:47,0:47:99:0,120,3076	1/1:0,6:6:12.04:228,12,0	1/1:1,20:21:60.21:1132,60,0	1/1:4,15:19:42.14:784,42,0	1/1:1,12:13:36.12:682,36,0	1/1:3,9:12:33.10:592,33,0	1/1:2,11:13:33.11:625,33,0	0/0:18,0:18:45.15:0,45,1187	0/0:20,0:20:54.19:0,54,1457	0/0:30,0:30:87.28:0,87,2253	0/0:28,0:28:78.27:0,78,2065	0/0:22,0:22:63.22:0,63,1663	0/0:25,0:25:69.24:0,69,1820	0/0:15,0:15:42.14:0,42,1134	1/1:1,16:17:45.15:847,45,0	1/1:1,21:22:51.17:966,51,0	1/1:1,9:10:27.09:504,27,0	1/1:1,22:23:57.20:1080,57,0	0/0:27,0:27:81.28:0,81,2181	0/0:26,0:26:78.25:0,78,1997	0/0:12,0:12:33.11:0,33,891
chr10	23244819	.	C	CT	4860.17	PASS	AB=0.909;AC=32;AF=0.571;AN=56;BaseQRankSum=6.117;DP=531;FS=2.752;HRun=10;HaplotypeScore=97.9402;InbreedingCoeff=0.7372;MQ=62.98;MQ0=4;MQRankSum=-8.659;QD=15.09;ReadPosRankSum=-0.113;VQSLOD=5.0252;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,32:34:34.55:540,35,0	1/1:1,7:8:21.94:226,22,0	0/1:15,0:12:1.32:1,0,77	0/1:22,0:10:7.13:7,0,49	1/1:3,20:24:44.98:460,45,0	1/1:5,18:24:59.82:602,60,0	1/1:2,10:12:12.03:126,12,0	0/0:28,0:28:27.76:0,28,429	1/1:8,2:9:18.59:147,19,0	1/1:10,12:19:45.08:461,45,0	0/1:8,8:16:19.06:221,0,19	1/1:2,9:11:30.06:311,30,0	1/1:2,9:11:33.07:341,33,0	1/1:0,13:13:30.08:320,30,0	0/0:3,0:17:20.37:0,20,59	0/0:2,0:21:34.54:0,35,100	0/0:30,0:30:71.88:0,72,591	0/0:24,0:24:58.93:0,59,469	0/1:29,1:30:11.92:12,0,378	0/0:18,0:18:7.05:0,7,325	0/0:15,0:15:35.69:0,36,295	1/1:5,8:13:18.05:192,18,0	1/1:10,11:21:27.54:284,28,0	1/1:4,7:10:21.01:211,21,0	1/1:11,9:20:39.08:398,39,0	0/0:26,0:26:62.77:0,63,505	0/0:15,0:15:38.94:0,39,318	0/0:13,0:13:35.94:0,36,295
chr10	23245153	.	CAGAG	C	94	PASS	AB=0.972;AC=9;AF=0.167;AN=54;BaseQRankSum=3.112;DP=573;FS=11.340;HRun=0;HaplotypeScore=91.5921;InbreedingCoeff=0.1905;MQ=69.44;MQ0=27;MQRankSum=-2.592;QD=0.56;ReadPosRankSum=-1.468;VQSLOD=0.5142;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:0.48:0,0,34	0/0:10,0:10:9.03:0,9,136	./.	0/1:59,0:20:0:0,0,0	0/1:16,0:16:7.44:7,0,18	0/0:25,0:25:6.02:0,6,130	0/0:24,0:24:10.41:0,10,82	0/0:21,0:21:1.25:0,1,3	0/0:18,0:18:9:0,9,119	0/0:18,0:17:8.86:0,9,151	0/0:15,0:15:4.81:0,5,30	0/0:11,0:11:0.89:0,1,2	0/0:18,0:18:9.03:0,9,187	0/0:18,0:17:3.01:0,3,52	0/1:18,0:18:0:0,0,0	0/1:19,0:20:29.81:30,0,141	1/1:12,7:19:3.01:46,3,0	0/0:19,0:18:17.88:0,18,217	0/0:15,0:14:2.97:0,3,20	0/0:19,0:19:11.18:0,11,146	0/0:8,0:7:6.01:0,6,79	0/0:17,0:16:8.99:0,9,75	1/1:16,0:16:2.96:37,3,0	0/0:15,0:14:2.99:0,3,24	0/0:19,0:19:14.53:0,15,172	0/0:21,0:21:2.68:0,3,11	0/1:18,0:18:71.57:84,0,72	0/0:9,0:9:0.47:0,0,1
chr10	23245271	.	AT	A	2854.70	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=9.910;DP=634;FS=5.427;HRun=3;HaplotypeScore=62.5866;InbreedingCoeff=0.9986;MQ=89.61;MQ0=0;MQRankSum=-0.784;QD=31.37;ReadPosRankSum=0.308;VQSLOD=3.4406;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:66.17:0,66,908	0/0:8,0:8:24.08:0,24,346	0/0:23,0:23:60.15:0,60,796	0/0:25,0:25:61.63:0,62,761	0/0:33,0:33:93.31:0,93,1338	0/0:33,0:33:99:0,99,1389	0/0:25,0:25:72.24:0,72,1037	1/1:3,22:25:66.19:805,66,0	0/0:21,0:21:57.17:0,57,801	0/0:25,0:25:72.24:0,72,1036	0/0:21,0:21:63.19:0,63,872	0/0:25,0:25:69.23:0,69,994	0/0:25,0:25:72.23:0,72,1016	0/0:25,0:25:69.22:0,69,971	0/0:23,0:23:69.21:0,69,959	0/0:22,0:22:66.22:0,66,951	0/0:19,0:19:57.19:0,57,818	0/0:13,0:12:36.12:0,36,518	0/0:22,0:22:63.21:0,63,907	0/0:27,0:27:81.25:0,81,1129	0/0:25,0:25:69.19:0,69,970	0/0:15,0:15:45.14:0,45,631	0/0:21,0:21:60.18:0,60,829	0/0:12,0:12:36.12:0,36,518	0/0:31,0:31:90.30:0,90,1296	1/1:1,21:22:22.96:723,23,0	1/1:0,23:23:60.19:744,60,0	1/1:0,21:21:60.19:744,60,0
chr10	23246653	.	GAGATAGATAGAT	G	995.43	PASS	AB=1.000;AC=16;AF=0.286;AN=56;BaseQRankSum=-2.919;DP=685;FS=6.156;HRun=0;HaplotypeScore=285.4402;InbreedingCoeff=0.1827;MQ=59.74;MQ0=22;MQRankSum=-1.385;QD=3.14;ReadPosRankSum=4.691;VQSLOD=1.6611;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:27:20.08:0,20,455	0/0:11,0:12:18.45:0,18,362	0/0:29,0:21:0.53:0,1,1	0/1:34,0:28:0:0,0,0	0/0:29,0:27:0:0,0,0	1/1:23,0:27:5.85:74,6,0	0/0:16,0:16:6.01:0,6,137	1/1:45,0:36:5.99:49,6,0	0/1:20,0:20:12.48:12,0,99	0/1:22,0:21:20.31:20,0,400	0/0:24,0:23:6.01:0,6,111	0/1:26,0:25:28.94:29,0,378	0/0:26,0:25:26.93:0,27,476	0/1:32,0:31:29.47:29,0,288	1/1:14,4:18:3.01:102,3,0	1/1:15,5:20:17.81:450,18,0	0/0:19,0:18:15.05:0,15,432	0/0:14,0:13:21.07:0,21,581	0/0:15,0:11:6.02:0,6,244	0/0:23,0:22:17.93:0,18,283	0/0:14,0:14:24.08:0,24,781	0/0:36,0:35:6.90:0,7,117	0/0:17,0:17:5.63:0,6,29	0/0:36,0:36:6.91:0,7,730	0/0:28,0:26:6.38:0,6,291	0/1:31,0:30:99:188,0,346	0/1:29,0:28:99:174,0,115	0/1:12,0:12:22.20:22,0,75
chr10	23246713	.	CAT	C	241.02	PASS	AB=0.920;AC=8;AF=0.154;AN=52;BaseQRankSum=-1.468;DP=431;FS=7.942;HRun=0;HaplotypeScore=127.6442;InbreedingCoeff=-0.0161;MQ=33.19;MQ0=109;MQRankSum=-2.762;QD=2.19;ReadPosRankSum=-2.634;VQSLOD=1.2200;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,2:19:5.27:0,5,67	0/0:7,0:6:12.04:0,12,209	./.	./.	0/1:16,0:14:0.03:0,0,0	0/0:19,0:16:4.05:0,4,14	0/0:11,0:9:5.05:0,5,50	0/1:14,5:14:99:216,0,108	0/1:11,0:11:9.75:10,0,40	0/0:15,1:12:30.41:0,30,353	0/0:13,0:10:3.01:0,3,56	0/0:16,0:15:20.69:0,21,273	0/0:16,0:14:2.92:0,3,203	0/0:18,0:16:10.85:0,11,142	0/0:9,5:11:2.03:0,2,6	0/1:11,5:13:32.13:32,0,64	1/1:10,3:8:2.93:20,3,0	0/1:13,0:11:8.35:8,0,39	0/0:10,0:2:6.02:0,6,87	0/0:8,0:6:3.01:0,3,50	0/1:20,1:10:68.49:68,0,203	0/0:20,0:20:6.02:0,6,107	0/0:3,0:1:2.90:0,3,16	0/0:26,0:23:11.95:0,12,367	0/0:14,0:9:8.25:0,8,128	0/0:21,1:21:3.30:0,3,656	0/0:15,0:15:18.72:0,19,184	0/0:9,1:9:11.22:0,11,152
chr10	23246715	.	TAGAC	T	382.20	PASS	AB=0.843;AC=21;AF=0.553;AN=38;BaseQRankSum=-4.173;DP=435;FS=0.000;HRun=0;HaplotypeScore=130.7851;InbreedingCoeff=0.4074;MQ=32.90;MQ0=114;MQRankSum=0.954;QD=1.81;ReadPosRankSum=-0.094;VQSLOD=2.4505;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:19:0.47:1,0,0	./.	./.	./.	0/1:6,11:15:0:0,0,0	1/1:18,1:16:6.02:82,6,0	0/0:11,0:9:0:0,0,1	0/0:21,0:14:12.03:0,12,142	1/1:10,0:10:0.47:1,0,0	1/1:11,5:12:11.72:187,12,0	0/0:10,3:10:0:0,0,0	1/1:16,0:15:3:29,3,0	1/1:17,0:15:2.99:45,3,0	1/1:18,0:16:3.01:35,3,0	./.	0/0:17,0:13:2.96:0,3,19	./.	1/1:6,7:11:3.01:47,3,0	./.	./.	1/1:17,3:9:3.01:47,3,0	./.	./.	0/1:22,2:21:5.36:19,0,5	0/1:13,0:8:0:1,0,0	0/0:15,0:22:24.54:0,25,417	0/0:6,0:16:7.78:0,8,23	0/0:10,0:9:2.60:0,3,7
chr10	23248927	.	CAACAACAACAAA	C	1449.89	PASS	AC=12;AF=0.261;AN=46;BaseQRankSum=6.059;DP=415;FS=0.000;HRun=0;HaplotypeScore=73.2025;InbreedingCoeff=0.7637;MQ=24.33;MQ0=185;MQRankSum=-2.013;QD=21.64;ReadPosRankSum=2.530;VQSLOD=1.0216;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:10:18.06:0,18,601	0/0:5,0:3:9.03:0,9,519	./.	./.	0/0:27,0:20:18.02:0,18,743	0/0:18,0:12:9.03:0,9,461	0/0:15,0:5:9.03:0,9,325	0/0:27,0:16:12.04:0,12,379	0/0:14,0:10:21.07:0,21,1093	0/0:19,0:10:21.07:0,21,940	0/0:24,0:16:21.07:0,21,812	0/0:11,0:8:12.04:0,12,626	0/0:23,0:13:9.46:0,9,233	0/0:16,0:9:12.04:0,12,704	1/1:11,8:12:12.04:417,12,0	1/1:4,0:2:3.01:32,3,0	1/1:3,2:4:6.02:176,6,0	1/1:4,1:2:6.02:138,6,0	1/1:7,3:6:9.03:313,9,0	1/1:11,13:20:17.95:527,18,0	./.	0/0:17,0:8:6.02:0,6,352	0/0:13,0:9:4.42:0,4,79	./.	0/0:13,0:4:12.04:0,12,436	0/0:17,0:11:24.08:0,24,1254	0/0:20,0:10:18.02:0,18,852	./.
chr10	23251404	.	A	AACT	1204.85	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-6.015;DP=747;FS=4.262;HRun=0;HaplotypeScore=103.4649;InbreedingCoeff=0.9014;MQ=76.33;MQ0=0;MQRankSum=-0.704;QD=36.51;ReadPosRankSum=1.357;VQSLOD=4.0867;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,27:33:63.22:1300,63,0	0/0:14,0:14:30.10:0,30,439	0/0:28,0:28:48.13:0,48,672	0/0:29,0:29:60.20:0,60,878	0/0:32,0:32:75.24:0,75,1061	0/0:35,0:35:84.28:0,84,1223	0/0:22,0:22:57.15:0,57,810	0/0:40,0:40:72.22:0,72,1017	0/0:23,0:23:57.19:0,57,832	0/0:18,0:18:45.15:0,45,659	0/0:29,0:29:66.22:0,66,965	0/0:22,0:22:45.15:0,45,658	0/0:44,0:44:99:0,102,1489	0/0:25,0:25:57.19:0,57,831	0/0:34,0:34:78.26:0,78,1139	0/0:31,0:31:72.22:0,72,1014	0/0:24,0:24:57.19:0,57,832	0/0:8,0:8:21.07:0,21,307	0/0:21,0:21:36.12:0,36,525	0/0:38,0:38:99:0,105,1512	0/0:23,0:23:60.20:0,60,876	0/0:30,0:30:78.26:0,78,1141	0/0:23,0:23:51.15:0,51,708	0/0:24,0:24:48.16:0,48,702	0/0:15,0:15:39.13:0,39,571	0/0:34,0:34:72.24:0,72,1054	0/0:45,0:45:99:0,114,1662	0/0:2,0:2:6.02:0,6,88
chr10	23261700	.	TAGAC	T	94.34	PASS	AC=6;AF=0.429;AN=14;BaseQRankSum=-2.434;DP=265;FS=0.000;HRun=0;HaplotypeScore=31.4647;MQ=22.14;MQ0=136;MQRankSum=0.057;QD=3.49;ReadPosRankSum=-0.510;VQSLOD=1.1275;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	./.	./.	1/1:0,5:3:3.01:46,3,0	./.	1/1:1,5:4:3.01:46,3,0	1/1:9,7:10:6.02:83,6,0	./.	./.	0/0:2,8:8:0:0,0,0	./.	./.	0/0:9,0:6:0.47:0,0,1	./.	./.	./.	./.	./.	./.	./.	./.	./.	0/0:6,0:10:18.41:0,18,235	0/0:2,0:10:15.05:0,15,271	./.
chr10	23261875	.	G	GT	390.66	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=-1.078;DP=510;FS=0.000;HRun=8;HaplotypeScore=47.9214;InbreedingCoeff=0.6615;MQ=45.22;MQ0=63;MQRankSum=2.166;QD=13.95;ReadPosRankSum=-0.098;VQSLOD=2.6860;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,17:17:42.12:484,42,0	0/0:13,0:11:23.98:0,24,214	0/0:10,0:7:17.91:0,18,145	0/1:11,0:7:5.36:5,0,70	0/0:16,0:11:24:0,24,219	0/0:30,0:24:63.03:0,63,576	0/0:16,0:11:23.99:0,24,220	0/0:27,0:21:60.03:0,60,549	0/0:18,0:17:42.01:0,42,384	0/0:25,0:20:57.03:0,57,522	0/0:20,0:16:39.01:0,39,357	0/0:19,0:18:32.89:0,33,302	0/0:22,0:19:42.02:0,42,384	0/0:27,0:23:51.01:0,51,466	0/0:16,0:11:27.01:0,27,247	0/0:17,0:15:32.99:0,33,302	0/0:16,0:15:42.02:0,42,384	0/0:10,0:8:21.01:0,21,192	0/0:16,0:8:18:0,18,165	0/0:21,0:19:54.02:0,54,493	0/0:21,0:20:51.03:0,51,467	0/0:22,0:19:48.01:0,48,439	0/0:14,0:10:27.01:0,27,247	0/0:14,0:11:33.02:0,33,302	0/0:21,0:13:35.97:0,36,321	0/0:26,0:24:66.02:0,66,600	0/0:18,0:13:36.02:0,36,329	0/0:6,0:4:9:0,9,82
chr10	23275154	.	AT	A	3757.32	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=6.763;DP=522;FS=0.814;HRun=5;HaplotypeScore=55.2932;InbreedingCoeff=0.9923;MQ=76.57;MQ0=0;MQRankSum=1.007;QD=31.84;ReadPosRankSum=1.532;VQSLOD=4.2286;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:45.15:0,45,616	0/0:5,0:5:15.05:0,15,205	0/0:15,0:15:36.04:0,36,443	0/0:9,0:9:24.03:0,24,293	0/0:28,0:28:75.19:0,75,998	0/0:24,0:23:72.23:0,72,968	0/0:8,0:8:18.06:0,18,246	0/0:31,0:31:78.24:0,78,1026	0/0:13,0:13:36.12:0,36,492	0/0:26,0:26:72.24:0,72,983	0/0:24,0:24:69.19:0,69,917	0/0:19,0:19:51.17:0,51,695	0/0:27,0:27:78.26:0,78,1067	0/0:13,0:13:39.13:0,39,533	1/1:0,20:20:60.17:681,60,0	1/1:0,18:18:54.15:613,54,0	1/1:0,19:19:57.16:646,57,0	1/1:1,12:13:30.09:340,30,0	1/1:4,10:14:15.51:323,16,0	1/1:0,25:25:75.21:848,75,0	1/1:0,9:9:27.08:306,27,0	0/0:12,0:12:36.12:0,36,492	0/0:18,0:18:51.12:0,51,661	0/0:18,0:18:54.18:0,54,739	0/0:19,0:19:57.15:0,57,745	0/0:25,0:25:69.21:0,69,913	0/0:36,0:36:99:0,108,1447	0/0:16,0:16:48.16:0,48,657
chr10	23277654	.	GTCTCTCTCTC	G	1800.96	PASS	AB=0.850;AC=26;AF=0.591;AN=44;BaseQRankSum=3.416;DP=448;FS=28.660;HRun=0;HaplotypeScore=131.5062;InbreedingCoeff=0.1416;MQ=75.14;MQ0=21;MQRankSum=0.530;QD=8.58;ReadPosRankSum=-1.007;VQSLOD=0.8535;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:18:5.27:21,5,0	./.	./.	./.	1/1:10,0:17:0.25:1,0,0	./.	0/1:10,0:12:56.30:56,0,94	./.	0/0:7,1:14:3.01:0,3,45	0/1:7,5:12:7.89:339,0,8	./.	1/1:5,1:14:3.01:78,3,0	1/1:7,0:6:5.93:67,6,0	0/0:11,0:14:0.26:0,0,8	0/1:13,0:13:10.65:120,0,11	0/1:8,4:12:57.37:57,0,64	0/0:21,0:20:26.98:0,27,570	0/0:3,0:10:0.47:0,0,1	0/0:22,0:21:8.36:0,8,60	0/0:20,0:18:8.76:0,9,108	0/1:20,0:19:99:104,0,208	1/1:7,0:8:9.03:173,9,0	1/1:9,5:16:0.47:1,0,0	1/1:14,0:13:13.76:255,14,0	1/1:6,0:12:0.21:1,0,0	0/1:8,0:11:99:174,0,121	1/1:8,0:14:12.04:326,12,0	1/1:6,0:7:6.02:160,6,0
chr10	23277703	.	TCACACACACACA	T	123.47	PASS	AC=2;AF=0.038;AN=52;BaseQRankSum=0.077;DP=455;FS=4.411;HRun=0;HaplotypeScore=175.3377;InbreedingCoeff=0.4691;MQ=45.26;MQ0=39;MQRankSum=-2.385;QD=5.61;ReadPosRankSum=-1.382;VQSLOD=2.5374;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:16,5:16:9.14:206,9,0	0/0:4,0:3:2.62:0,3,86	./.	./.	0/0:19,0:18:18.06:0,18,849	0/0:27,0:25:25.44:0,25,1151	0/0:21,0:18:5.89:0,6,980	0/0:10,0:10:8.86:0,9,87	0/0:27,0:24:30.10:0,30,1416	0/0:17,0:16:33.03:0,33,1194	0/0:16,0:16:15.05:0,15,714	0/0:21,0:19:30.10:0,30,1266	0/0:10,0:9:21.07:0,21,825	0/0:10,0:10:9.50:0,10,360	0/0:13,0:13:12.04:0,12,464	0/0:12,0:10:14.97:0,15,476	0/0:22,0:21:27.56:0,28,1063	0/0:17,0:16:0.51:0,1,545	0/0:17,0:14:18.06:0,18,716	0/0:20,0:19:28.16:0,28,1097	0/0:27,0:20:26.56:0,27,999	0/0:19,0:19:12.03:0,12,402	0/0:17,0:17:14.18:0,14,718	0/0:27,0:21:36.11:0,36,1409	0/0:22,0:22:30.10:0,30,1470	0/0:13,0:12:23.02:0,23,491	0/0:19,0:17:19.94:0,20,249	0/0:6,0:6:9.03:0,9,146
chr10	23277720	.	C	CAT	1067.99	PASS	AB=1.000;AC=10;AF=0.185;AN=54;BaseQRankSum=-6.586;DP=511;FS=9.404;HRun=0;HaplotypeScore=122.6440;InbreedingCoeff=0.0857;MQ=47.38;MQ0=41;MQRankSum=0.685;QD=6.40;ReadPosRankSum=1.023;VQSLOD=2.8545;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:21:17.12:0,17,116	0/1:5,0:4:7.29:7,0,10	./.	0/0:10,0:6:11.92:0,12,90	0/0:20,0:20:19.04:0,19,106	0/0:22,0:21:1.57:0,2,14	0/0:23,0:20:13.24:0,13,49	0/0:18,0:17:42.14:0,42,285	0/0:27,0:24:7.05:0,7,38	0/0:19,0:18:18.39:0,18,158	0/0:15,0:15:14.06:0,14,86	0/0:20,0:18:1.05:0,1,6	0/0:11,0:10:12.27:0,12,79	0/0:12,0:12:8.12:0,8,33	0/1:14,0:14:29.77:39,0,30	0/1:12,0:10:13.59:14,0,74	0/1:22,0:21:85.03:249,0,85	0/1:21,0:20:3.27:206,0,3	1/1:6,12:16:16.17:265,16,0	0/1:19,0:18:70.74:108,0,71	0/1:34,0:28:7.15:315,0,7	0/0:19,0:19:10.75:0,11,88	0/0:23,0:23:21:0,21,88	0/0:29,0:23:15.57:0,16,72	0/1:21,0:21:4.51:5,0,65	0/0:15,0:13:32.66:0,33,255	0/0:18,0:16:26.14:0,26,180	0/0:9,0:9:20.03:0,20,131
chr10	23277722	.	C	CAT	3118.29	PASS	AB=0.951;AC=23;AF=0.426;AN=54;BaseQRankSum=-3.956;DP=509;FS=38.509;HRun=0;HaplotypeScore=113.1392;InbreedingCoeff=0.4686;MQ=47.83;MQ0=39;MQRankSum=3.698;QD=11.06;ReadPosRankSum=5.318;VQSLOD=1.6884;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:21:17.23:0,17,125	1/1:4,0:4:6.17:31,6,0	./.	0/0:11,0:7:14.78:0,15,112	1/1:19,0:19:22.71:300,23,0	1/1:22,0:21:26.53:340,27,0	1/1:23,0:20:21.40:341,21,0	0/0:19,0:18:52.54:0,53,373	1/1:27,0:24:31.84:344,32,0	0/1:18,0:17:34.48:229,0,34	0/1:15,0:15:1.70:190,0,2	1/1:20,0:18:27.45:346,27,0	0/1:12,0:11:8.01:135,0,8	1/1:12,0:12:3.49:86,3,0	0/0:14,0:14:20.91:0,21,216	0/0:11,0:9:17.50:0,18,175	0/0:23,0:22:34.03:0,34,246	0/0:22,0:21:25.92:0,26,177	0/1:18,0:15:11.29:11,0,85	0/0:17,0:16:10.08:0,10,80	0/0:32,0:26:39.76:0,40,296	0/1:9,9:19:12.97:13,0,42	1/1:23,0:23:32.80:336,33,0	0/1:29,0:24:23.69:361,0,24	0/1:21,0:21:17.01:247,0,17	0/0:16,0:14:32.66:0,33,254	0/0:18,0:16:29.08:0,29,204	0/0:9,0:9:18.27:0,18,125
chr10	23278009	.	C	CG	1145.97	PASS	AB=0.732;AC=31;AF=0.574;AN=54;BaseQRankSum=3.662;DP=431;FS=1.276;HRun=10;HaplotypeScore=78.3124;InbreedingCoeff=0.4769;MQ=77.93;MQ0=0;MQRankSum=-1.835;QD=4.46;ReadPosRankSum=-5.771;VQSLOD=-0.3179;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:13,14:27:12.64:55,0,13	1/1:6,1:8:8.77:64,9,0	0/0:15,0:14:25.55:0,26,178	0/0:17,0:18:11.32:0,11,174	1/1:7,0:7:7.54:52,8,0	1/1:10,0:15:2.96:19,3,0	1/1:21,2:25:8.75:178,9,0	1/1:14,2:16:2.98:22,3,0	0/1:7,9:16:12.61:84,0,13	1/1:7,0:7:8.90:61,9,0	1/1:11,0:11:4.55:28,5,0	1/1:14,0:15:5.92:20,6,0	1/1:9,1:11:21.71:171,22,0	0/1:11,0:13:11.42:74,0,11	0/0:21,0:22:30.51:0,31,231	0/0:23,0:24:37.89:0,38,300	0/0:20,0:21:43.05:0,43,343	0/0:8,0:8:17.96:0,18,148	0/0:17,0:17:26.94:0,27,220	0/0:20,0:22:34.11:0,34,252	0/0:20,0:20:29.87:0,30,241	1/1:9,0:10:6.35:42,6,0	1/1:11,0:13:10.22:75,10,0	0/1:8,3:25:13.19:49,0,13	1/1:8,0:9:4.55:28,5,0	0/1:8,1:9:15.59:49,0,16	1/1:14,6:20:26.91:266,27,0	./.
chr10	23279018	.	G	GTCA	3566.96	PASS	AB=0.875;AC=53;AF=0.946;AN=56;BaseQRankSum=4.737;DP=420;FS=4.603;HRun=0;HaplotypeScore=192.3459;InbreedingCoeff=0.5396;MQ=69.37;MQ0=0;MQRankSum=-7.778;QD=8.83;ReadPosRankSum=5.733;VQSLOD=2.7811;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:14:17.61:94,18,0	1/1:11,0:11:18.90:118,19,0	0/0:16,0:16:45.12:0,45,668	0/1:12,0:14:3.90:4,0,265	1/1:22,3:25:19.14:159,19,0	1/1:24,3:27:27.62:73,28,0	1/1:10,0:10:14.15:107,14,0	1/1:19,4:23:42.64:280,43,0	1/1:13,3:15:18.17:108,18,0	1/1:19,2:21:40:311,40,0	1/1:23,2:25:23.82:157,24,0	1/1:12,2:15:16.20:104,16,0	1/1:11,1:12:21.25:212,21,0	1/1:8,3:11:10.65:59,11,0	1/1:15,4:19:15.42:55,15,0	1/1:6,1:7:9.24:86,9,0	1/1:10,2:12:14.91:141,15,0	1/1:4,0:4:6.35:57,6,0	1/1:7,0:7:17.71:197,18,0	1/1:15,5:20:21.87:179,22,0	1/1:4,0:4:3.93:43,4,0	1/1:9,0:9:8.88:76,9,0	1/1:14,0:14:17.20:145,17,0	1/1:3,0:3:1.25:3,1,0	1/1:20,1:21:28.30:190,28,0	1/1:16,2:17:34.57:283,35,0	1/1:33,3:35:47.10:309,47,0	1/1:6,0:6:8.40:21,8,0
chr10	23279020	.	CTCT	C	10821.07	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=6.471;DP=388;FS=0.000;HRun=0;HaplotypeScore=160.4016;InbreedingCoeff=0.7515;MQ=69.82;MQ0=0;MQRankSum=-7.452;QD=30.06;ReadPosRankSum=7.818;VQSLOD=4.8551;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,12:13:36.10:411,36,0	1/1:0,11:11:33.10:396,33,0	0/0:15,0:15:45.12:0,45,989	0/0:13,0:13:5.15:0,5,373	1/1:3,21:24:48.14:556,48,0	1/1:3,23:26:68.88:798,69,0	1/1:0,9:9:27.08:315,27,0	1/1:2,16:18:42:599,42,0	1/1:3,12:14:32.37:422,32,0	1/1:2,18:20:57.14:689,57,0	1/1:2,23:25:63.19:741,63,0	1/1:2,10:12:28.46:357,28,0	1/1:1,11:12:31.64:390,32,0	1/1:2,8:10:24.07:281,24,0	1/1:4,13:17:39.12:455,39,0	1/1:1,5:6:11.31:173,11,0	1/1:2,8:12:27.36:292,27,0	1/1:1,2:4:8.72:81,9,0	1/1:0,4:7:13.03:186,13,0	1/1:4,15:19:41.43:532,41,0	1/1:0,3:3:6.02:71,6,0	1/1:0,6:6:18.05:212,18,0	1/1:0,12:12:33.10:385,33,0	1/1:0,2:2:3.01:35,3,0	1/1:1,20:21:53.05:647,53,0	1/1:2,15:16:41.46:555,41,0	1/1:3,30:33:83.51:1027,84,0	1/1:0,6:6:18.06:216,18,0
chr10	23279024	.	AGATT	A	13289.73	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=1.126;DP=378;FS=5.261;HRun=0;HaplotypeScore=158.8505;InbreedingCoeff=0.8190;MQ=69.23;MQ0=0;MQRankSum=-7.325;QD=37.65;ReadPosRankSum=5.544;VQSLOD=4.8996;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,12:12:33.11:463,33,0	1/1:1,11:12:36.12:520,36,0	0/0:15,0:15:39.13:0,39,892	0/0:10,0:10:15.62:0,16,250	1/1:2,21:23:48.16:667,48,0	1/1:2,23:25:69.15:958,69,0	1/1:0,9:9:27.09:378,27,0	1/1:1,16:17:50.96:733,51,0	1/1:2,12:13:38.92:524,39,0	1/1:2,18:20:60.20:878,60,0	1/1:3,23:26:66.20:923,66,0	1/1:2,10:12:35.91:484,36,0	1/1:1,11:12:35.91:482,36,0	1/1:2,8:10:24.08:337,24,0	1/1:3,13:16:39.13:546,39,0	1/1:2,5:7:20.86:268,21,0	1/1:4,8:12:26.88:352,27,0	1/1:1,2:3:8.82:102,9,0	1/1:0,4:4:12.04:179,12,0	1/1:4,15:19:47.95:668,48,0	1/1:0,3:3:6.02:85,6,0	1/1:0,6:6:18.06:254,18,0	1/1:0,12:12:33.11:462,33,0	1/1:0,2:2:3.01:42,3,0	1/1:1,20:21:59.90:799,60,0	1/1:2,15:16:47.95:679,48,0	1/1:3,30:33:90.09:1249,90,0	1/1:0,6:6:18.06:257,18,0
chr10	23279972	.	ATGTGTGTG	A	232.53	PASS	AB=0.625;AC=11;AF=0.306;AN=36;BaseQRankSum=0.106;DP=80;FS=0.000;HRun=0;HaplotypeScore=38.6525;InbreedingCoeff=0.4291;MQ=37.48;MQ0=5;MQRankSum=-3.289;QD=9.69;ReadPosRankSum=0.106;VQSLOD=1.0689;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:2,3:5:0:0,0,0	0/0:2,0:2:3.01:0,3,93	./.	./.	./.	0/0:5,0:5:5.61:0,6,218	0/0:3,0:3:9.03:0,9,315	1/1:5,1:4:3.01:78,3,0	0/0:5,0:5:6.47:0,6,149	0/0:1,0:1:3.01:0,3,75	0/0:1,0:1:3.01:0,3,96	0/0:3,0:3:9.03:0,9,279	0/0:3,0:3:9.03:0,9,320	./.	./.	0/0:4,0:4:0:0,0,0	1/1:5,0:5:3.01:95,3,0	1/1:2,0:2:6.02:133,6,0	./.	./.	0/0:1,2:3:0:0,0,0	./.	./.	0/0:6,0:6:9.03:0,9,297	0/0:5,0:5:3.01:0,3,76	1/1:1,1:2:0.47:1,0,0	./.	1/1:3,0:2:3:29,3,0
chr10	23280006	.	ATGTGTGTGTG	A	827.76	PASS	AB=0.630;AC=10;AF=0.250;AN=40;BaseQRankSum=1.885;DP=173;FS=10.877;HRun=0;HaplotypeScore=64.4833;InbreedingCoeff=0.4609;MQ=41.99;MQ0=9;MQRankSum=-1.572;QD=12.73;ReadPosRankSum=-0.519;VQSLOD=0.3081;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:6,0:19:0:0,0,1	0/0:1,0:1:3.01:0,3,139	0/0:6,0:1:3.01:0,3,34	0/0:6,0:2:3.01:0,3,91	./.	0/0:11,0:11:12.04:0,12,429	0/0:8,0:8:9.02:0,9,224	1/1:11,6:14:18.03:250,18,0	0/0:8,0:8:12.93:0,13,413	0/0:2,0:2:6.02:0,6,204	0/0:1,0:1:3.01:0,3,151	0/0:4,0:4:3.01:0,3,141	0/0:9,0:8:21.07:0,21,846	./.	./.	0/0:1,0:3:0:0,0,0	0/1:4,0:8:20.81:21,0,51	0/0:3,0:3:3.01:0,3,71	1/1:3,0:5:5.98:55,6,0	./.	./.	./.	./.	0/0:13,0:17:30.10:0,30,1206	0/0:5,0:5:6.02:0,6,212	1/1:1,7:8:18.06:451,18,0	1/1:0,5:5:5.97:179,6,0	./.
chr10	23281586	.	T	TGA	20263.95	PASS	AB=0.906;AC=54;AF=0.964;AN=56;BaseQRankSum=2.384;DP=509;FS=16.944;HRun=0;HaplotypeScore=280.6090;InbreedingCoeff=-0.0414;MQ=53.15;MQ0=0;MQRankSum=-4.989;QD=39.81;ReadPosRankSum=2.660;VQSLOD=1.5331;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,7:8:18.06:273,18,0	1/1:1,7:8:24.05:325,24,0	0/1:10,1:10:95.45:95,0,152	0/1:7,1:8:77.84:86,0,78	1/1:4,33:37:99:1454,105,0	1/1:4,21:25:69.23:1061,69,0	1/1:0,16:16:48.16:716,48,0	1/1:4,18:22:63.11:949,63,0	1/1:2,16:18:54.04:735,54,0	1/1:4,29:33:99:1551,99,0	1/1:5,33:38:99:1582,111,0	1/1:2,14:16:48.15:684,48,0	1/1:4,21:25:72.24:1055,72,0	1/1:0,14:14:42.14:602,42,0	1/1:4,10:14:38.94:496,39,0	1/1:4,13:17:51.17:783,51,0	1/1:3,8:11:33.11:486,33,0	1/1:2,2:4:9.03:139,9,0	1/1:4,14:17:48.14:716,48,0	1/1:9,23:32:90.27:1194,90,0	1/1:3,3:6:14.97:159,15,0	1/1:6,14:20:54.18:794,54,0	1/1:3,17:20:60.19:859,60,0	1/1:4,8:12:24.08:330,24,0	1/1:7,14:21:53.97:766,54,0	1/1:3,18:21:60.20:947,60,0	1/1:3,25:29:84.09:1209,84,0	1/1:3,1:4:12.04:218,12,0
chr10	23281600	.	T	TA	16966.59	PASS	AB=0.885;AC=54;AF=0.964;AN=56;BaseQRankSum=0.599;DP=459;FS=2.066;HRun=6;HaplotypeScore=267.7773;InbreedingCoeff=-0.0367;MQ=48.81;MQ0=0;MQRankSum=-2.950;QD=36.96;ReadPosRankSum=1.815;VQSLOD=0.2165;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,1:9:12.04:167,12,0	1/1:6,0:6:18.03:244,18,0	0/1:7,3:9:7.18:121,0,7	0/1:3,0:3:7.41:21,0,7	1/1:34,3:37:99:1408,105,0	1/1:20,1:21:51.08:682,51,0	1/1:13,0:13:36.12:537,36,0	1/1:22,1:23:69.14:915,69,0	1/1:16,1:17:51.14:719,51,0	1/1:27,1:28:84.24:1164,84,0	1/1:33,1:34:90.20:1261,90,0	1/1:12,2:14:42.14:608,42,0	1/1:20,1:21:63.10:846,63,0	1/1:13,2:15:42.14:617,42,0	1/1:13,0:13:39.06:494,39,0	1/1:16,2:18:45.12:637,45,0	1/1:9,3:12:27.09:402,27,0	1/1:4,0:4:9.02:115,9,0	1/1:14,2:15:42.13:600,42,0	1/1:29,1:30:90.11:1150,90,0	1/1:4,0:4:12.04:155,12,0	1/1:17,2:19:51.09:673,51,0	1/1:16,2:18:48.16:696,48,0	1/1:11,1:12:26.96:298,27,0	1/1:16,1:17:42.09:556,42,0	1/1:16,2:18:54.18:794,54,0	1/1:24,1:25:75.21:1048,75,0	1/1:1,1:2:3.01:37,3,0
chr10	23281987	.	TA	T	1990.03	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=8.594;DP=549;FS=0.000;HRun=10;HaplotypeScore=56.2032;InbreedingCoeff=0.9950;MQ=76.55;MQ0=0;MQRankSum=-0.468;QD=17.61;ReadPosRankSum=-0.740;VQSLOD=3.8472;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,26:30:38.80:566,39,0	0/0:14,0:14:42.11:0,42,465	0/0:15,0:15:16.26:0,16,323	0/0:11,0:11:20.94:0,21,207	0/0:24,0:24:54.13:0,54,589	0/0:18,0:18:51.14:0,51,564	0/0:14,0:14:36.06:0,36,378	1/1:4,16:20:47.98:417,48,0	0/0:15,0:15:39.11:0,39,431	0/0:28,1:29:69.19:0,69,763	0/0:16,0:16:33.09:0,33,365	0/0:18,0:18:40.35:0,40,434	0/0:18,1:19:28.09:0,28,538	0/0:14,0:14:36.10:0,36,398	0/0:20,1:21:37.12:0,37,637	0/0:20,0:20:57.15:0,57,630	0/0:23,0:24:65.97:0,66,697	0/0:17,0:17:39.04:0,39,416	0/0:25,0:25:31.26:0,31,564	0/0:30,1:31:40.10:0,40,657	0/0:13,0:13:33.08:0,33,357	0/0:25,0:25:69.19:0,69,763	0/0:16,0:16:42.10:0,42,457	0/0:18,0:18:39.11:0,39,431	0/0:19,0:19:54.14:0,54,590	1/1:4,20:24:23.74:426,24,0	1/1:4,23:28:59:497,59,0	1/1:0,11:11:29.99:260,30,0
chr10	23283472	.	T	TG	13961.17	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=18.532;DP=684;FS=1.273;HRun=2;HaplotypeScore=168.2506;InbreedingCoeff=0.9915;MQ=87.49;MQ0=0;MQRankSum=-5.699;QD=37.84;ReadPosRankSum=4.527;VQSLOD=4.2160;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:34:93.27:0,93,1138	1/1:1,13:14:39.13:561,39,0	0/0:38,0:38:99:0,111,1324	0/0:22,0:22:51.16:0,51,626	1/1:0,23:23:60.12:835,60,0	1/1:0,15:15:42.14:604,42,0	1/1:0,19:19:48.16:689,48,0	0/0:32,0:32:87.24:0,87,1053	1/1:0,22:22:63.21:907,63,0	1/1:3,17:20:51.17:730,51,0	1/1:2,24:26:69.23:985,69,0	1/1:1,20:21:60.20:863,60,0	1/1:3,23:26:63.21:905,63,0	1/1:0,25:25:69.23:986,69,0	1/1:4,22:26:60.20:863,60,0	1/1:1,31:32:87.29:1251,87,0	0/0:30,0:30:84.26:0,84,1040	0/0:9,0:9:23.10:0,23,266	0/0:20,0:20:57.15:0,57,680	0/0:23,0:23:63.20:0,63,781	0/0:29,0:29:81.23:0,81,980	1/1:3,22:25:60.20:854,60,0	1/1:2,33:35:90.30:1295,90,0	1/1:0,19:19:54.18:772,54,0	1/1:0,21:20:60.20:862,60,0	0/0:33,0:33:44.39:0,44,1034	0/0:41,0:41:99:0,111,1376	0/0:3,0:3:9.03:0,9,112
chr10	23283691	.	A	AT	15477.48	PASS	AB=0.577;AC=51;AF=0.911;AN=56;BaseQRankSum=-7.132;DP=647;FS=9.060;HRun=9;HaplotypeScore=58.0953;InbreedingCoeff=0.7736;MQ=76.41;MQ0=0;MQRankSum=-5.851;QD=25.09;ReadPosRankSum=3.810;VQSLOD=5.3763;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,34:40:99:1095,99,0	1/1:3,7:10:18.05:199,18,0	0/0:13,0:13:26.98:0,27,233	0/0:16,0:17:25.20:0,25,299	1/1:3,22:25:63.09:670,63,0	1/1:2,18:20:45.12:498,45,0	1/1:2,22:25:60:645,60,0	1/1:11,26:37:52.14:794,52,0	1/1:5,23:28:63.17:697,63,0	1/1:2,15:17:45.12:498,45,0	1/1:3,23:27:69.02:741,69,0	1/1:4,25:29:52.15:802,52,0	1/1:2,21:23:60.16:664,60,0	1/1:5,21:26:54.15:597,54,0	1/1:4,18:22:51.14:564,51,0	1/1:5,15:20:42.11:465,42,0	1/1:3,16:19:48.13:531,48,0	1/1:1,11:12:24.06:265,24,0	1/1:6,18:25:56.97:601,57,0	0/1:8,22:30:29.03:608,0,29	1/1:2,13:15:39.11:431,39,0	1/1:9,22:31:43.22:702,43,0	1/1:1,24:25:66.09:730,66,0	1/1:2,20:23:56.99:612,57,0	1/1:3,16:19:20.87:410,21,0	1/1:7,20:27:57.15:630,57,0	1/1:4,29:33:69.19:763,69,0	1/1:0,9:9:24.06:265,24,0
chr10	23283962	.	GATTTTC	G	11122.82	PASS	AB=0.514;AC=19;AF=0.339;AN=56;BaseQRankSum=14.107;DP=660;FS=1.454;HRun=0;HaplotypeScore=147.0016;InbreedingCoeff=0.9056;MQ=78.56;MQ0=0;MQRankSum=-17.144;QD=61.11;ReadPosRankSum=0.413;VQSLOD=5.0344;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,27:28:75.13:1684,75,0	0/0:8,0:8:24.08:0,24,813	0/0:18,0:18:54.09:0,54,1762	0/0:18,0:18:48.16:0,48,1582	0/0:33,0:33:99:0,99,3381	0/0:30,0:30:84.29:0,84,2955	0/0:28,0:28:84.27:0,84,2931	1/1:3,28:31:84.29:1956,84,0	0/0:27,0:27:78.27:0,78,2780	0/0:34,0:34:99:0,102,3554	0/0:34,0:34:99:0,102,3601	0/0:21,0:21:63.22:0,63,2244	0/0:37,0:37:99:0,111,4067	0/0:27,0:27:81.28:0,81,2871	0/0:37,0:37:99:0,111,3970	0/0:36,0:36:99:0,108,3809	1/1:0,13:13:30.10:738,30,0	1/1:0,5:5:9.03:222,9,0	1/1:2,14:16:39.13:928,39,0	1/1:1,22:23:66.14:1483,66,0	1/1:2,6:8:12:207,12,0	0/0:30,0:30:87.30:0,87,3098	0/0:17,0:17:51.18:0,51,1836	0/0:18,0:18:51.17:0,51,1854	0/0:25,0:25:75.26:0,75,2739	0/1:1,18:19:52.82:1188,0,53	1/1:0,31:31:90.31:2179,90,0	1/1:0,8:8:24.04:537,24,0
chr10	23284527	.	ATG	A	17798.50	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=0.029;DP=639;FS=0.635;HRun=0;HaplotypeScore=176.2339;InbreedingCoeff=0.9621;MQ=66.46;MQ0=5;MQRankSum=-4.628;QD=30.95;ReadPosRankSum=7.024;VQSLOD=6.1167;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,24:27:63.20:819,63,0	1/1:2,7:9:21.07:273,21,0	0/0:28,0:23:46.93:0,47,693	0/0:36,0:27:56.06:0,56,800	1/1:1,27:28:63.20:819,63,0	1/1:1,23:24:66.21:858,66,0	1/1:0,17:17:48.16:624,48,0	1/1:9,36:45:99:1351,105,0	1/1:2,14:16:42.14:546,42,0	1/1:4,23:27:72.22:921,72,0	1/1:4,22:27:65.93:857,66,0	1/1:2,13:15:36.12:468,36,0	1/1:4,27:31:58.78:881,59,0	1/1:2,25:27:51.01:768,51,0	1/1:2,21:23:60.20:780,60,0	1/1:0,21:21:60.20:780,60,0	1/1:9,10:18:36.12:467,36,0	1/1:4,8:12:16.18:266,16,0	1/1:6,10:16:30.10:390,30,0	1/1:3,32:34:96.31:1248,96,0	1/1:4,15:19:30.10:390,30,0	1/1:4,17:21:51.17:663,51,0	1/1:0,20:20:54.17:702,54,0	1/1:2,15:17:33.11:429,33,0	1/1:2,19:21:54.18:702,54,0	1/1:2,23:25:69.22:896,69,0	1/1:10,19:28:63.13:784,63,0	1/1:0,3:3:9.03:117,9,0
chr10	23284563	.	A	ATGTGTGTGTG	16607.59	PASS	AB=0.784;AC=49;AF=0.875;AN=56;BaseQRankSum=-1.919;DP=738;FS=2.533;HRun=0;HaplotypeScore=342.3460;InbreedingCoeff=0.4372;MQ=50.77;MQ0=6;MQRankSum=-1.561;QD=23.83;ReadPosRankSum=1.088;VQSLOD=3.4787;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:32:30.88:542,31,0	1/1:10,0:13:20.48:216,20,0	0/0:33,0:16:8.05:0,8,85	0/1:42,0:22:31.21:31,0,163	1/1:26,0:30:20.61:182,21,0	1/1:21,1:28:23.92:485,24,0	1/1:21,0:21:11.16:111,11,0	1/1:46,0:46:84.27:2294,84,0	1/1:17,0:20:19.74:350,20,0	1/1:27,0:35:68.96:1116,69,0	1/1:21,0:27:32.42:594,32,0	1/1:12,0:14:14.47:275,14,0	1/1:26,0:37:57.53:1186,58,0	1/1:23,0:29:35.92:850,36,0	1/1:29,0:30:30.10:596,30,0	1/1:21,0:25:27:703,27,0	0/1:7,0:15:4.34:130,0,4	0/0:8,0:8:2.37:0,2,17	0/1:8,0:14:1.10:160,0,1	1/1:17,0:37:24.26:345,24,0	1/1:19,0:25:26.76:201,27,0	1/1:22,0:29:23.77:409,24,0	1/1:26,0:30:33.09:512,33,0	1/1:16,0:17:20.61:314,21,0	1/1:13,0:23:29.97:611,30,0	1/1:23,12:35:66.18:2388,66,0	1/1:16,12:35:45.15:1796,45,0	1/1:4,0:5:12.02:210,12,0
chr10	23284796	.	G	GC	14101.38	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=4.761;DP=586;FS=13.384;HRun=0;HaplotypeScore=91.4095;InbreedingCoeff=0.9982;MQ=84.02;MQ0=0;MQRankSum=-5.804;QD=41.84;ReadPosRankSum=4.052;VQSLOD=4.1510;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:42.14:0,42,578	1/1:0,10:10:27.09:431,27,0	0/0:20,0:20:60.18:0,60,803	0/0:22,0:22:66.19:0,66,854	1/1:1,20:21:48.16:766,48,0	1/1:0,34:34:93.32:1484,93,0	1/1:2,25:27:69.24:1102,69,0	0/0:38,0:38:99:0,102,1381	1/1:0,20:20:57.19:911,57,0	1/1:1,15:16:45.15:711,45,0	1/1:0,27:27:75.26:1197,75,0	1/1:0,19:19:54.18:862,54,0	1/1:0,28:28:78.27:1243,78,0	1/1:0,15:15:42.14:671,42,0	1/1:2,23:26:60.20:946,60,0	1/1:1,21:22:57.19:910,57,0	0/0:19,0:19:57.17:0,57,778	0/0:9,0:9:16.79:0,17,323	0/0:16,0:16:48.14:0,48,639	0/0:23,0:23:66.22:0,66,923	0/0:15,0:15:45.13:0,45,611	1/1:1,13:14:27.09:429,27,0	1/1:2,27:29:69.24:1098,69,0	1/1:0,17:17:51.17:815,51,0	1/1:0,12:12:33.11:526,33,0	0/0:34,0:34:93.30:0,93,1285	0/0:26,0:26:78.26:0,78,1089	0/0:13,0:13:39.13:0,39,545
chr10	23284904	.	A	AT	10674.14	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=16.551;DP=518;FS=6.405;HRun=0;HaplotypeScore=75.3394;InbreedingCoeff=0.9882;MQ=72.05;MQ0=0;MQRankSum=-0.671;QD=38.12;ReadPosRankSum=3.954;VQSLOD=5.0993;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:51.07:0,51,651	1/1:1,6:7:15.05:219,15,0	0/0:21,0:21:56.26:0,56,631	0/0:8,0:8:24.02:0,24,296	1/1:0,19:19:57.11:797,57,0	1/1:0,18:18:48.16:700,48,0	1/1:0,22:22:48.16:701,48,0	0/0:38,0:38:99:0,108,1414	1/1:0,19:19:57.19:824,57,0	1/1:3,25:28:72.14:976,72,0	1/1:0,25:25:69.06:931,69,0	1/1:0,17:17:48.16:697,48,0	1/1:4,9:13:36.05:492,36,0	1/1:0,20:20:54.18:778,54,0	1/1:1,19:20:54.18:780,54,0	1/1:0,11:11:30.10:427,30,0	0/0:20,0:20:60.14:0,60,796	0/0:12,0:12:36.12:0,36,502	0/0:27,0:27:81.22:0,81,1062	0/0:25,0:25:72.23:0,72,986	0/0:19,0:19:54.15:0,54,717	1/1:1,15:16:42.14:611,42,0	1/1:0,19:19:51.17:736,51,0	1/1:0,6:6:18.06:255,18,0	1/1:1,19:20:54.11:751,54,0	0/0:21,0:21:63.19:0,63,833	0/0:27,0:27:78.25:0,78,1056	0/0:3,0:3:9.03:0,9,125
chr10	23284993	.	T	TCG	1729.66	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=7.681;DP=462;FS=3.288;HRun=0;HaplotypeScore=105.3705;InbreedingCoeff=0.7989;MQ=65.01;MQ0=15;MQRankSum=-5.447;QD=10.61;ReadPosRankSum=-3.755;VQSLOD=2.3440;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:20.82:0,21,184	1/1:1,2:3:7.57:80,8,0	0/0:39,0:18:26.17:0,26,417	0/0:46,0:18:10.82:0,11,239	1/1:2,9:13:2.58:57,3,0	1/1:1,10:12:11.63:163,12,0	1/1:1,8:10:3.01:46,3,0	0/0:21,0:37:88.70:0,89,771	1/1:4,6:10:11.91:160,12,0	1/1:7,2:9:26.73:240,27,0	1/1:7,3:10:8.56:144,9,0	1/1:4,2:6:9.01:105,9,0	1/1:2,10:12:21.05:309,21,0	1/1:2,7:8:12.04:185,12,0	1/1:5,2:7:9:100,9,0	1/1:5,2:7:6.02:76,6,0	0/0:27,0:27:75.10:0,75,941	0/0:16,0:16:41.31:0,41,570	0/0:13,0:13:19.90:0,20,389	0/0:22,0:22:45.07:0,45,718	0/0:29,0:29:57:0,57,693	1/1:2,15:18:5.35:54,5,0	1/1:15,2:17:5.73:72,6,0	1/1:0,7:7:3.01:59,3,0	1/1:1,12:13:6.02:87,6,0	0/0:27,0:27:8.17:0,8,417	0/0:18,0:18:18.56:0,19,226	0/0:11,0:11:18.67:0,19,143
chr10	23285031	.	G	GTC	3815.28	PASS	AB=1.000;AC=34;AF=0.607;AN=56;BaseQRankSum=3.050;DP=537;FS=61.602;HRun=0;HaplotypeScore=115.3159;InbreedingCoeff=0.7132;MQ=52.44;MQ0=11;MQRankSum=2.314;QD=13.16;ReadPosRankSum=5.967;VQSLOD=1.0867;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:20,0:20:9.59:10,0,88	1/1:3,2:5:6.87:96,7,0	0/0:32,0:12:23.88:0,24,220	0/0:32,0:13:28.69:0,29,253	1/1:17,0:17:20.53:202,21,0	1/1:19,2:20:38.91:416,39,0	1/1:11,0:11:17.92:147,18,0	0/0:37,0:35:85.09:0,85,600	1/1:6,6:12:17.90:204,18,0	1/1:19,1:21:7.16:436,7,0	1/1:17,1:18:32.57:413,33,0	1/1:7,2:9:9.16:178,9,0	1/1:10,4:14:26.63:345,27,0	1/1:12,1:12:7.84:262,8,0	1/1:3,8:13:6.02:71,6,0	1/1:7,0:9:5.86:45,6,0	0/0:25,0:25:2.22:0,2,132	0/0:19,0:19:14.41:0,14,137	0/0:15,0:15:1.60:0,2,244	0/0:27,0:27:17.69:0,18,237	0/1:34,0:34:14.98:15,0,123	1/1:19,3:22:12.55:213,13,0	1/1:22,2:24:44.56:379,45,0	1/1:17,0:17:26.93:241,27,0	1/1:9,0:10:12.02:143,12,0	0/0:22,0:22:43.64:0,44,352	0/0:19,0:19:41.08:0,41,283	0/0:19,0:19:48.73:0,49,325
chr10	23285200	.	T	TG	7833.71	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-14.680;DP=571;FS=5.052;HRun=1;HaplotypeScore=53.6400;InbreedingCoeff=0.9964;MQ=91.24;MQ0=0;MQRankSum=1.155;QD=40.17;ReadPosRankSum=1.061;VQSLOD=5.3771;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,27:28:80.86:1158,81,0	0/0:13,0:13:39.11:0,39,491	0/0:20,0:20:57.18:0,57,728	0/0:28,0:28:78.25:0,78,1010	0/0:22,0:22:66.21:0,66,857	0/0:26,0:26:75.23:0,75,955	0/0:24,0:24:72.20:0,72,904	1/1:2,39:41:99:1686,114,0	0/0:30,0:30:87.26:0,87,1107	0/0:14,0:14:42.14:0,42,543	0/0:16,0:16:45.15:0,45,581	0/0:19,0:19:57.18:0,57,728	0/0:19,0:19:57.18:0,57,737	0/0:18,0:18:51.16:0,51,659	0/0:24,0:24:72.23:0,72,934	0/0:26,0:26:78.25:0,78,1012	1/1:0,7:7:15.05:225,15,0	1/1:1,11:12:33.11:487,33,0	1/1:0,14:14:42.14:625,42,0	1/1:0,26:26:75.21:1098,75,0	1/1:0,28:28:75.25:1124,75,0	0/0:19,0:19:54.17:0,54,694	0/0:18,0:18:54.17:0,54,688	0/0:24,0:24:66.20:0,66,841	0/0:16,0:16:45.14:0,45,577	1/1:1,15:16:39.13:577,39,0	1/1:0,17:17:39.13:584,39,0	1/1:0,6:6:18.06:269,18,0
chr10	23286293	.	A	AC	3904.11	PASS	AB=1.000;AC=10;AF=0.179;AN=56;BaseQRankSum=4.629;DP=609;FS=2.889;HRun=1;HaplotypeScore=128.9612;InbreedingCoeff=0.7346;MQ=86.07;MQ0=0;MQRankSum=-0.784;QD=26.38;ReadPosRankSum=-3.397;VQSLOD=2.6554;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:19.29:0,19,102	0/0:9,0:9:27.09:0,27,350	0/0:22,0:22:53.15:0,53,648	0/0:19,0:19:53.82:0,54,618	0/0:24,0:24:72.21:0,72,904	0/0:19,0:19:57.17:0,57,722	0/0:19,0:19:57.15:0,57,706	1/1:4,37:41:99:1572,117,0	0/0:21,0:21:63.19:0,63,799	0/0:22,0:22:66.19:0,66,811	0/0:25,0:24:75.22:0,75,944	0/0:20,0:20:60.18:0,60,762	0/0:20,0:20:51.15:0,51,645	0/0:31,0:31:89.30:0,89,1113	0/0:26,0:26:78.22:0,78,979	0/0:16,0:16:48.16:0,48,620	0/1:26,0:26:20.27:20,0,75	0/0:14,0:14:25.90:0,26,79	0/1:20,0:20:26.43:66,0,26	0/0:18,0:18:15.61:0,16,111	0/0:8,0:8:15.18:0,15,41	0/0:21,0:21:63.19:0,63,800	0/0:19,0:19:54.04:0,54,673	0/0:32,0:32:96.24:0,96,1178	0/0:33,0:33:96.29:0,96,1217	1/1:2,25:27:39.36:999,39,0	1/1:1,28:29:78.26:1118,78,0	1/1:0,5:5:9.03:129,9,0
chr10	23287513	.	A	AAAAAC	3482.72	PASS	AC=6;AF=0.111;AN=54;BaseQRankSum=-2.653;DP=643;FS=2.592;HRun=0;HaplotypeScore=139.1249;InbreedingCoeff=0.9443;MQ=60.04;MQ0=5;MQRankSum=-5.694;QD=37.45;ReadPosRankSum=-2.025;VQSLOD=3.2368;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:54.15:0,54,910	0/0:9,0:9:20.98:0,21,355	0/0:37,0:22:16.72:0,17,238	0/0:42,0:20:5.50:0,5,54	0/0:31,0:30:60.20:0,60,1052	0/0:21,0:21:33.10:0,33,575	0/0:13,0:13:24.08:0,24,429	1/1:28,0:30:37.36:673,37,0	0/0:26,0:26:28:0,28,563	0/0:27,0:27:51.16:0,51,880	0/0:29,0:29:44.43:0,44,919	0/0:16,0:16:24.07:0,24,411	0/0:19,0:19:36.08:0,36,623	0/0:15,0:15:33.07:0,33,550	0/0:16,0:16:21.06:0,21,354	0/0:18,0:18:33.10:0,33,575	0/0:31,0:31:32.63:0,33,748	0/0:22,0:22:14.60:0,15,530	0/0:19,0:19:26.88:0,27,431	0/0:25,0:25:54.10:0,54,891	0/0:13,0:13:24.07:0,24,380	0/0:19,0:19:27.06:0,27,428	0/0:25,0:25:54.12:0,54,894	0/0:22,0:22:33.07:0,33,564	0/0:27,0:27:51.12:0,51,860	1/1:19,8:28:54.11:1330,54,0	1/1:21,9:35:60.16:1480,60,0	./.
chr10	23287572	.	AT	A	7724.98	PASS	AB=0.833;AC=39;AF=0.696;AN=56;BaseQRankSum=4.445;DP=526;FS=14.167;HRun=10;HaplotypeScore=161.8304;InbreedingCoeff=0.7217;MQ=64.87;MQ0=3;MQRankSum=-5.466;QD=19.22;ReadPosRankSum=0.829;VQSLOD=3.6266;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,21:24:62.98:547,63,0	1/1:3,10:13:32.97:281,33,0	0/1:15,1:11:20.53:21,0,33	0/1:22,0:14:20.86:21,0,38	1/1:6,22:28:5.69:503,6,0	1/1:0,20:20:59.99:521,60,0	1/1:5,17:22:50.97:442,51,0	1/1:10,12:22:50.98:441,51,0	1/1:4,14:18:41.98:365,42,0	1/1:2,17:19:50.99:443,51,0	1/1:1,23:24:59.97:521,60,0	1/1:2,11:13:32.97:283,33,0	1/1:2,18:20:50.98:443,51,0	1/1:1,14:15:38.99:338,39,0	0/0:13,0:13:36.10:0,36,398	0/0:18,1:19:25.11:0,25,505	0/0:2,0:19:37.17:0,37,188	0/0:2,0:14:34.50:0,35,174	0/0:9,0:23:49.18:0,49,279	0/0:6,0:25:31.31:0,31,160	0/0:2,0:11:28.77:0,29,150	1/1:3,13:16:8.84:305,9,0	1/1:5,22:27:68.96:595,69,0	1/1:1,10:11:17.05:176,17,0	1/1:1,15:16:41.98:365,42,0	1/1:5,23:28:68.96:599,69,0	1/1:2,20:23:56.02:474,56,0	0/1:1,2:3:24.15:43,0,24
chr10	23287595	.	A	AAAAACAAAC	33900.76	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-1.896;DP=576;FS=12.644;HRun=0;HaplotypeScore=209.9243;InbreedingCoeff=0.9909;MQ=68.73;MQ0=4;MQRankSum=-13.868;QD=89.21;ReadPosRankSum=0.003;VQSLOD=3.6428;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:63.21:0,63,1605	1/1:5,7:12:36.12:1171,36,0	0/0:33,0:20:12.38:0,12,595	0/0:23,0:16:15.68:0,16,395	1/1:18,14:33:96.26:2997,96,0	1/1:9,13:22:63.20:2379,63,0	1/1:16,8:24:66.19:1849,66,0	1/1:13,6:26:65.42:1235,65,0	1/1:16,6:22:63.18:1850,63,0	1/1:14,7:21:60.17:1794,60,0	1/1:11,10:21:57.19:1925,57,0	1/1:10,9:19:51.13:1700,51,0	1/1:17,7:24:72.14:1817,72,0	1/1:6,9:15:45.15:1626,45,0	0/0:16,0:16:48.16:0,48,1172	0/0:21,0:21:57.18:0,57,1495	0/0:18,0:18:53.87:0,54,1154	0/0:14,0:14:42.13:0,42,1091	0/0:15,0:15:43.69:0,44,1100	0/0:22,0:22:52.05:0,52,1327	0/0:10,0:10:30.09:0,30,705	1/1:8,10:19:57.18:1941,57,0	1/1:13,13:29:87.27:3055,87,0	1/1:7,3:10:15.04:394,15,0	1/1:7,12:19:54.17:1982,54,0	1/1:15,15:30:81.26:2992,81,0	1/1:9,17:26:66.20:2558,66,0	1/1:5,3:8:24.06:636,24,0
chr10	23287651	.	GA	G	9278.04	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=11.112;DP=550;FS=2.054;HRun=7;HaplotypeScore=115.8098;InbreedingCoeff=0.9980;MQ=78.58;MQ0=0;MQRankSum=-4.076;QD=25.21;ReadPosRankSum=4.300;VQSLOD=4.2066;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:63.15:0,63,750	1/1:2,8:10:18.04:183,18,0	0/0:16,0:16:33.06:0,33,384	0/0:17,0:17:35.30:0,35,471	1/1:0,38:38:99:1009,99,0	1/1:1,21:22:54.12:551,54,0	1/1:2,19:21:54.12:551,54,0	1/1:0,25:25:75.14:751,75,0	1/1:1,18:19:51.11:520,51,0	1/1:3,24:27:72.15:727,72,0	1/1:4,18:22:48.10:489,48,0	1/1:1,13:14:36.08:367,36,0	1/1:1,21:22:60.13:612,60,0	1/1:2,11:13:30.07:306,30,0	0/0:19,0:19:54.17:0,54,679	0/0:23,0:23:63.20:0,63,792	0/0:25,0:25:72.22:0,72,894	0/0:12,0:12:33.11:0,33,415	0/0:19,0:19:54.16:0,54,659	0/0:20,0:20:45.13:0,45,543	0/0:8,0:8:24.08:0,24,302	1/1:1,14:15:36.08:367,36,0	1/1:3,17:20:42.09:428,42,0	1/1:0,15:15:36.08:367,36,0	1/1:2,13:15:27.05:275,27,0	1/1:1,27:28:81.18:826,81,0	1/1:4,24:28:63.12:642,63,0	1/1:2,12:14:30.06:306,30,0
chr10	23287983	.	GAA	G	5495.29	PASS	AB=0.609;AC=29;AF=0.518;AN=56;BaseQRankSum=-7.151;DP=453;FS=9.670;HRun=8;HaplotypeScore=100.2252;InbreedingCoeff=0.9023;MQ=50.68;MQ0=8;MQRankSum=-4.366;QD=22.52;ReadPosRankSum=2.798;VQSLOD=3.0738;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:21:41.28:0,41,174	1/1:6,5:11:17.98:200,18,0	0/0:24,0:8:11.81:0,12,131	0/0:22,0:8:17.37:0,17,152	1/1:8,20:28:51.14:620,51,0	1/1:1,24:24:54.17:658,54,0	1/1:2,6:7:12.04:144,12,0	0/0:4,0:14:33.93:0,34,147	1/1:1,8:9:18.05:219,18,0	1/1:3,16:19:48.15:584,48,0	1/1:6,10:16:24.04:280,24,0	1/1:2,11:13:27.08:328,27,0	1/1:1,9:10:18.05:219,18,0	1/1:6,9:15:30.05:333,30,0	0/0:3,0:10:17.60:0,18,67	0/0:5,0:18:38.68:0,39,135	0/0:13,0:16:32.11:0,32,169	0/0:3,0:4:10.96:0,11,55	0/1:5,1:13:10.62:11,0,70	0/0:8,0:25:57.77:0,58,209	0/0:1,0:4:7.49:0,7,26	1/1:3,14:17:36.03:420,36,0	1/1:5,18:22:54.14:642,54,0	1/1:3,11:14:24.05:279,24,0	1/1:5,17:22:48.05:559,48,0	0/0:4,0:21:43.56:0,44,170	0/0:5,0:14:30.45:0,30,124	0/0:2,0:9:23.37:0,23,102
chr10	23287996	.	CA	C	3225.28	PASS	AB=0.818;AC=35;AF=0.625;AN=56;BaseQRankSum=4.695;DP=458;FS=0.434;HRun=13;HaplotypeScore=111.7373;InbreedingCoeff=0.8608;MQ=54.23;MQ0=1;MQRankSum=-8.013;QD=11.16;ReadPosRankSum=2.591;VQSLOD=3.1684;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,0:21:30.55:90,31,0	1/1:0,6:6:17.90:131,18,0	0/0:15,0:8:15.40:0,15,125	0/0:7,0:4:2.50:0,2,9	1/1:10,18:28:41.61:302,42,0	1/1:7,13:21:42.82:296,43,0	1/1:4,1:5:4.98:28,5,0	0/0:24,0:23:51.03:0,51,485	1/1:2,7:9:23.86:175,24,0	1/1:6,18:23:20.54:312,21,0	1/1:3,11:15:37.83:268,38,0	1/1:5,7:12:23.66:165,24,0	1/1:5,10:15:29.82:218,30,0	1/1:6,8:14:23.82:175,24,0	1/1:5,2:8:15.06:83,15,0	1/1:2,0:16:28.51:83,29,0	0/0:17,0:19:43.47:0,43,274	0/0:5,0:7:20.44:0,20,129	0/0:12,0:16:28.94:0,29,165	0/0:28,0:34:64.67:0,65,376	0/0:3,0:4:8.97:0,9,78	1/1:4,11:18:42.07:279,42,0	1/1:8,19:28:40.75:290,41,0	1/1:2,12:14:23.83:175,24,0	1/1:3,19:22:47.71:350,48,0	0/0:22,0:22:21.04:0,21,337	0/0:16,1:17:17.09:0,17,312	0/1:7,2:9:19.77:20,0,151
chr10	23288654	.	T	TA	2095.92	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-10.546;DP=500;FS=2.200;HRun=9;HaplotypeScore=66.5868;InbreedingCoeff=0.9718;MQ=77.04;MQ0=0;MQRankSum=0.697;QD=24.37;ReadPosRankSum=0.367;VQSLOD=4.4797;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:13:29.01:0,29,236	0/0:11,0:11:29.99:0,30,260	0/0:13,0:13:14.11:0,14,139	0/0:13,0:13:26.92:0,27,223	0/0:26,0:26:62.86:0,63,534	0/0:29,0:29:71.46:0,71,608	0/0:10,0:10:26.98:0,27,234	0/0:27,0:27:62.94:0,63,539	0/0:18,0:19:52.99:0,53,440	0/0:14,0:14:38.67:0,39,323	0/0:16,0:16:35.99:0,36,312	0/0:13,0:13:35.99:0,36,312	0/0:18,0:18:50.95:0,51,434	0/0:23,0:23:56.96:0,57,495	0/0:22,0:22:56.97:0,57,491	0/0:11,0:11:23.96:0,24,205	1/1:1,18:19:31.18:541,31,0	1/1:6,11:17:39.09:421,39,0	1/1:4,9:14:6.83:267,7,0	1/1:3,16:20:49.30:605,49,0	1/1:0,16:16:39.11:431,39,0	0/0:11,0:11:23.99:0,24,208	0/0:17,0:17:47.91:0,48,403	0/0:13,0:13:32.96:0,33,281	0/0:20,0:20:56.94:0,57,485	0/0:27,0:27:74.17:0,74,626	0/0:39,0:39:99:0,114,983	0/0:9,0:9:23.99:0,24,208
chr10	23288746	.	GA	G	2588.89	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-5.605;DP=460;FS=11.394;HRun=7;HaplotypeScore=62.6775;InbreedingCoeff=0.9880;MQ=73.65;MQ0=0;MQRankSum=-3.375;QD=25.38;ReadPosRankSum=2.329;VQSLOD=3.7193;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,13:13:36.08:367,36,0	0/0:6,0:6:18.04:0,18,213	0/0:6,0:6:15.05:0,15,186	0/0:15,0:13:30.05:0,30,345	0/0:28,0:28:78.25:0,78,981	0/0:17,0:17:45.14:0,45,566	0/0:9,0:9:27.09:0,27,339	0/0:28,0:28:81.26:0,81,1019	0/0:20,0:20:60.17:0,60,730	0/0:20,0:20:54.17:0,54,679	0/0:13,0:13:39.12:0,39,490	0/0:16,0:16:48.15:0,48,604	0/0:17,0:17:48.15:0,48,592	0/0:20,0:20:54.17:0,54,679	0/0:4,0:14:28.87:0,29,155	0/0:2,0:14:34.43:0,34,174	1/1:2,14:16:45.08:451,45,0	1/1:2,11:13:27.06:275,27,0	1/1:0,21:21:63.14:642,63,0	1/1:1,23:24:57.12:582,57,0	1/1:0,15:15:45.10:459,45,0	0/0:18,0:18:54.17:0,54,679	0/0:11,0:11:30.10:0,30,377	0/0:10,0:10:30.07:0,30,352	0/0:28,0:28:78.25:0,78,981	0/0:17,0:17:36.11:0,36,442	0/0:26,0:26:66.21:0,66,830	0/0:5,0:5:12.04:0,12,151
chr10	23289570	.	AT	A	3969.81	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=11.242;DP=567;FS=1.676;HRun=6;HaplotypeScore=61.7439;InbreedingCoeff=0.9989;MQ=70.13;MQ0=1;MQRankSum=-2.804;QD=27.19;ReadPosRankSum=2.683;VQSLOD=4.1980;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,28:29:69.11:727,69,0	0/0:9,0:9:27.07:0,27,341	0/0:15,1:15:27.37:0,27,448	0/0:26,0:25:57.16:0,57,696	0/0:23,0:23:69.22:0,69,908	0/0:16,0:16:45.14:0,45,579	0/0:16,0:16:42.14:0,42,552	0/0:32,0:32:87.27:0,87,1122	0/0:16,0:16:45.14:0,45,579	0/0:18,0:18:51.16:0,51,659	0/0:24,0:24:72.19:0,72,902	0/0:21,0:21:63.19:0,63,815	0/0:28,0:28:72.23:0,72,947	0/0:20,0:20:60.20:0,60,789	0/0:22,0:22:60.18:0,60,775	0/0:12,0:12:36.12:0,36,473	1/1:4,29:33:75.19:806,75,0	1/1:1,19:20:57.14:612,57,0	1/1:3,17:18:48.09:503,48,0	1/1:0,21:21:57.14:612,57,0	1/1:0,23:23:66.17:709,66,0	0/0:16,0:16:48.16:0,48,629	0/0:14,0:14:39.12:0,39,499	0/0:14,0:14:36.08:0,36,442	0/0:10,0:10:27.08:0,27,334	0/0:27,0:27:69.22:0,69,896	0/0:32,0:32:87.25:0,87,1101	0/0:8,0:8:24.08:0,24,316
chr10	23289917	.	C	CA	468.79	PASS	AB=0.556;AC=9;AF=0.167;AN=54;BaseQRankSum=9.534;DP=385;FS=0.682;HRun=5;HaplotypeScore=65.6136;InbreedingCoeff=0.7927;MQ=78.48;MQ0=0;MQRankSum=-7.152;QD=13.02;ReadPosRankSum=0.917;VQSLOD=2.0847;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,8:10:23.74:166,24,0	0/0:12,0:12:36.12:0,36,503	0/0:7,0:7:9.07:0,9,240	0/0:12,0:11:8.22:0,8,253	0/0:32,0:32:96.32:0,96,1341	0/0:13,0:13:39.13:0,39,545	0/0:7,0:7:21.07:0,21,293	0/0:28,0:28:81.27:0,81,1132	0/0:14,0:14:42.14:0,42,586	0/0:18,0:18:51.17:0,51,700	0/0:22,0:22:66.22:0,66,921	0/0:9,0:9:27.09:0,27,378	0/0:14,0:14:42.14:0,42,587	0/0:19,0:19:57.19:0,57,795	0/0:15,0:15:45.14:0,45,612	0/0:19,0:19:57.19:0,57,795	1/1:2,1:3:6.81:45,7,0	1/1:2,2:4:8.94:67,9,0	0/1:1,4:5:19.75:71,0,20	1/1:0,14:14:41.25:274,41,0	./.	0/0:18,0:18:54.17:0,54,738	0/0:14,0:14:42.13:0,42,570	0/0:8,0:8:21.07:0,21,294	0/0:23,0:23:69.23:0,69,965	0/0:18,0:18:54.18:0,54,755	0/0:21,0:21:63.21:0,63,877	0/0:6,0:6:18.06:0,18,252
chr10	23289920	.	C	CAG	614.73	PASS	AB=0.633;AC=8;AF=0.148;AN=54;BaseQRankSum=9.026;DP=387;FS=0.000;HRun=0;HaplotypeScore=73.9447;InbreedingCoeff=0.7734;MQ=77.42;MQ0=0;MQRankSum=-8.196;QD=17.56;ReadPosRankSum=2.514;VQSLOD=3.5394;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,8:11:21.95:192,22,0	0/0:12,0:12:36.12:0,36,587	0/0:7,0:7:20.86:0,21,289	0/0:12,0:11:23.14:0,23,251	0/0:31,0:31:93.29:0,93,1468	0/0:13,0:13:39.13:0,39,636	0/0:6,0:6:18.05:0,18,270	0/0:28,0:28:84.28:0,84,1340	0/0:16,0:16:45.14:0,45,710	0/0:19,0:19:54.18:0,54,861	0/0:23,0:23:69.24:0,69,1110	0/0:9,0:9:27.09:0,27,441	0/0:14,0:14:42.14:0,42,685	0/0:19,0:19:57.18:0,57,905	0/0:15,0:15:45.14:0,45,710	0/0:19,0:19:57.18:0,57,906	0/1:1,1:2:4.29:19,0,4	1/1:0,2:2:6.01:57,6,0	0/1:2,4:6:2.47:107,0,2	1/1:1,13:14:41.98:386,42,0	./.	0/0:18,0:18:54.18:0,54,881	0/0:13,0:13:39.13:0,39,636	0/0:8,0:8:24.08:0,24,392	0/0:24,0:24:69.24:0,69,1126	0/0:19,0:19:54.18:0,54,860	0/0:21,0:21:63.20:0,63,1004	0/0:6,0:6:18.06:0,18,294
chr10	23289922	.	T	TTTTCCCCTCCAG	7330.07	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=10.344;DP=406;FS=1.192;HRun=0;HaplotypeScore=147.5778;InbreedingCoeff=0.9550;MQ=74.08;MQ0=0;MQRankSum=-10.292;QD=133.27;ReadPosRankSum=1.713;VQSLOD=5.4018;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,8:18:45.13:2044,45,0	0/0:13,0:13:36.12:0,36,1406	0/0:6,0:6:18.03:0,18,438	0/0:12,0:11:23.58:0,24,336	0/0:29,0:29:87.28:0,87,3239	0/0:14,0:14:42.13:0,42,1504	0/0:5,0:5:15.05:0,15,577	0/0:28,0:28:84.26:0,84,2617	0/0:16,0:16:48.15:0,48,1621	0/0:19,0:19:57.20:0,57,2033	0/0:24,0:24:66.23:0,66,2529	0/0:9,0:9:27.09:0,27,1060	0/0:14,0:14:42.14:0,42,1581	0/0:18,0:18:54.19:0,54,2099	0/0:15,0:15:45.15:0,45,1692	0/0:20,0:20:57.18:0,57,2081	1/1:4,1:5:15.05:707,15,0	1/1:0,2:2:6.02:322,6,0	1/1:4,4:8:24.08:1081,24,0	1/1:6,13:19:52.99:2729,53,0	1/1:3,0:3:9.03:449,9,0	0/0:18,0:18:54.19:0,54,2054	0/0:13,0:13:39.12:0,39,1439	0/0:8,0:8:24.08:0,24,902	0/0:25,0:25:75.23:0,75,2635	0/0:18,0:18:54.18:0,54,1884	0/0:21,0:21:63.22:0,63,2353	0/0:6,0:6:18.06:0,18,492
chr10	23290550	.	G	GA	5756.90	PASS	AB=0.565;AC=27;AF=0.482;AN=56;BaseQRankSum=-10.011;DP=583;FS=2.548;HRun=10;HaplotypeScore=67.9358;InbreedingCoeff=0.9284;MQ=75.16;MQ0=1;MQRankSum=-0.795;QD=19.58;ReadPosRankSum=2.985;VQSLOD=5.8770;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:68.89:0,69,565	1/1:3,6:9:23.88:230,24,0	0/0:19,0:18:30.75:0,31,222	0/0:21,0:18:13.62:0,14,242	1/1:8,23:32:63.16:669,63,0	1/1:6,25:32:66:686,66,0	0/1:2,10:13:1.41:225,0,1	0/0:33,0:33:62.79:0,63,516	1/1:3,0:13:11.40:57,11,0	1/1:5,15:22:47.62:458,48,0	1/1:5,23:28:41.81:627,42,0	1/1:9,9:18:8.05:270,8,0	1/1:4,24:28:42.09:448,42,0	1/1:3,18:21:33.08:352,33,0	0/0:1,0:17:28.52:0,29,82	0/0:5,0:25:33.55:0,34,113	0/0:16,0:16:35.90:0,36,288	0/0:14,0:14:35.93:0,36,295	0/0:28,0:28:65.85:0,66,532	0/0:24,0:24:50.93:0,51,419	0/0:10,0:10:26.96:0,27,220	1/1:2,23:27:62.16:668,62,0	1/1:7,17:25:7.69:452,8,0	1/1:2,5:7:17.88:174,18,0	1/1:2,16:18:23.41:441,23,0	0/0:21,0:22:52.97:0,53,425	0/0:20,0:20:50.93:0,51,418	0/0:11,0:11:32.96:0,33,271
chr10	23292950	.	CT	C	7138.92	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=11.945;DP=651;FS=1.995;HRun=11;HaplotypeScore=77.5231;InbreedingCoeff=0.9761;MQ=71.95;MQ0=0;MQRankSum=-0.289;QD=16.04;ReadPosRankSum=3.249;VQSLOD=5.8446;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:65.99:0,66,649	1/1:0,8:8:17.97:148,18,0	0/0:13,0:12:20.86:0,21,188	0/0:17,1:17:5.49:0,5,241	1/1:5,32:40:57.99:651,58,0	1/1:2,17:18:44.95:369,45,0	1/1:1,12:14:35:277,35,0	0/0:25,0:25:54.12:0,54,564	1/1:1,12:14:34.99:277,35,0	1/1:7,20:28:40.03:471,40,0	1/1:2,29:31:80.81:659,81,0	1/1:2,23:26:67.95:548,68,0	1/1:3,27:30:77.90:640,78,0	1/1:2,23:25:68.92:566,69,0	0/0:19,0:19:45.06:0,45,451	0/0:29,1:30:59.56:0,60,832	1/1:2,0:17:18.33:53,18,0	1/1:1,0:12:20.36:59,20,0	1/1:3,0:15:24.22:70,24,0	1/1:6,1:42:64.07:201,64,0	1/1:2,0:13:22.40:65,22,0	1/1:5,28:34:79.75:645,80,0	1/1:1,30:31:77.90:640,78,0	1/1:4,13:18:37.99:301,38,0	1/1:3,24:28:61.90:498,62,0	0/0:24,1:25:32.46:0,32,529	0/0:29,2:31:25.86:0,26,663	0/0:16,2:19:20.29:0,20,398
chr10	23295468	.	C	CTTT	6594.70	PASS	AB=0.649;AC=49;AF=0.875;AN=56;BaseQRankSum=-2.315;DP=481;FS=1.798;HRun=12;HaplotypeScore=91.2109;InbreedingCoeff=0.1202;MQ=80.03;MQ0=2;MQRankSum=-2.540;QD=14.37;ReadPosRankSum=-0.090;VQSLOD=3.3028;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,12:17:25.44:443,25,0	1/1:1,0:10:20.68:151,21,0	0/1:22,0:18:15.24:15,0,134	0/0:22,0:18:8.63:0,9,112	1/1:5,0:17:3.25:209,3,0	1/1:3,0:19:33.61:235,34,0	0/1:1,0:7:12.71:116,0,13	0/1:7,0:29:31.14:80,0,31	1/1:5,0:15:16.22:135,16,0	1/1:7,0:20:34.18:324,34,0	1/1:6,0:28:50.27:377,50,0	1/1:5,5:11:15.03:240,15,0	1/1:3,16:22:24.08:424,24,0	1/1:7,5:12:12.03:173,12,0	1/1:4,1:16:20.10:285,20,0	1/1:4,0:10:22.60:292,23,0	1/1:5,3:11:15.05:251,15,0	1/1:3,5:9:12.04:206,12,0	1/1:3,11:15:30:417,30,0	1/1:6,16:28:69.13:1031,69,0	1/1:2,6:9:15.03:244,15,0	1/1:4,0:12:20.96:189,21,0	1/1:5,1:25:12.12:344,12,0	1/1:1,0:8:11.95:91,12,0	1/1:5,0:22:15.20:82,15,0	0/1:3,0:15:7.72:111,0,8	0/1:10,0:34:91.96:93,0,92	1/1:4,0:14:8.03:39,8,0
chr10	23296290	.	TTG	T	6622.74	PASS	AB=1.000;AC=35;AF=0.625;AN=56;BaseQRankSum=-7.236;DP=540;FS=58.188;HRun=0;HaplotypeScore=101.5224;InbreedingCoeff=-0.0375;MQ=77.37;MQ0=1;MQRankSum=1.621;QD=14.52;ReadPosRankSum=0.119;VQSLOD=2.1296;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:19:7.50:101,8,0	1/1:8,0:8:3.14:42,3,0	0/0:36,0:29:68.27:0,68,1029	0/0:19,0:15:43.88:0,44,494	1/1:30,0:30:49.53:391,50,0	0/1:21,0:21:49.19:82,0,49	0/1:17,0:17:9.22:27,0,9	1/1:4,29:33:72.18:1140,72,0	0/0:15,0:15:13.99:0,14,84	0/1:25,0:25:10.77:248,0,11	1/1:10,0:10:4.61:100,5,0	0/1:12,0:12:1.02:1,0,41	0/1:22,0:22:41.28:41,0,42	0/1:19,0:19:25.79:26,0,59	1/1:1,24:25:54.18:825,54,0	1/1:0,25:25:51.17:780,51,0	0/1:22,0:22:99:106,0,137	0/0:14,0:14:1.07:0,1,100	0/1:14,0:14:63.71:64,0,78	0/1:10,0:10:43.85:84,0,44	0/1:11,0:11:51.95:82,0,52	0/1:11,0:11:31.79:59,0,32	0/1:23,0:23:13.64:85,0,14	1/1:13,0:13:4.10:25,4,0	0/1:17,0:17:19.12:19,0,28	1/1:4,20:24:63.06:839,63,0	1/1:1,27:28:66.21:988,66,0	1/1:3,14:16:32.78:468,33,0
chr10	23296291	.	TG	T	6288.86	PASS	AB=1.000;AC=51;AF=0.911;AN=56;BaseQRankSum=2.000;DP=534;FS=13.078;HRun=1;HaplotypeScore=94.3231;InbreedingCoeff=0.7103;MQ=79.71;MQ0=1;MQRankSum=-6.253;QD=13.21;ReadPosRankSum=0.449;VQSLOD=2.6011;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:19:44.46:278,44,0	1/1:8,0:8:20.14:124,20,0	0/0:37,1:31:54.83:0,55,794	0/0:20,0:16:27.95:0,28,383	1/1:28,1:29:76.41:544,76,0	1/1:19,2:21:30.26:185,30,0	1/1:14,1:15:29.30:190,29,0	1/1:30,2:32:87.18:678,87,0	1/1:15,0:15:18.07:84,18,0	1/1:24,1:25:62.79:398,63,0	1/1:10,0:10:27.33:205,27,0	1/1:12,0:12:16.23:99,16,0	1/1:21,1:22:26.05:145,26,0	1/1:18,1:19:15.78:86,16,0	1/1:24,0:24:53.79:407,54,0	1/1:25,0:25:50.81:385,51,0	1/1:19,2:21:5.92:224,6,0	0/1:13,0:13:5.38:65,0,5	1/1:15,1:16:19.47:207,19,0	1/1:10,0:10:6.26:105,6,0	1/1:11,0:11:13.63:161,14,0	1/1:11,0:11:16.94:102,17,0	1/1:20,1:21:32.44:188,32,0	1/1:12,1:13:11.56:68,12,0	1/1:17,0:17:15.92:87,16,0	1/1:23,1:24:68.45:515,68,0	1/1:28,0:28:65.72:495,66,0	1/1:14,1:14:32.88:267,33,0
chr10	23296601	.	GATTATTATTATTATT	G	2864.69	PASS	AC=14;AF=0.318;AN=44;BaseQRankSum=-1.211;DP=192;FS=0.000;HRun=0;HaplotypeScore=84.6128;InbreedingCoeff=0.6564;MQ=60.02;MQ0=0;MQRankSum=0.027;QD=32.55;ReadPosRankSum=-0.742;VQSLOD=2.3783;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:6:9.03:0,9,124	./.	0/0:3,0:3:3.01:0,3,39	./.	1/1:5,0:5:3.01:35,3,0	0/0:12,0:12:18.01:0,18,229	0/0:1,0:1:2.99:0,3,23	1/1:16,11:27:33.07:515,33,0	0/0:4,0:4:2.99:0,3,23	0/0:8,0:8:12.04:0,12,288	0/0:4,0:4:3:0,3,25	0/0:9,0:9:12:0,12,113	0/0:4,0:4:6.47:0,6,73	0/0:6,0:6:8.98:0,9,74	1/1:5,5:10:9.03:361,9,0	1/1:2,2:4:6.02:251,6,0	0/0:5,0:10:18.06:0,18,482	0/0:5,0:5:8.85:0,9,114	0/0:6,0:10:15.05:0,15,370	./.	./.	./.	0/0:4,0:4:2.99:0,3,23	./.	0/0:3,0:3:3.01:0,3,50	1/1:5,5:10:15.04:497,15,0	1/1:11,11:22:24.08:986,24,0	1/1:5,5:10:9.03:376,9,0
chr10	23296631	.	TATTATTATTATC	T	1923.74	PASS	AB=1.000;AC=29;AF=0.580;AN=50;BaseQRankSum=7.834;DP=175;FS=15.290;HRun=0;HaplotypeScore=77.8194;InbreedingCoeff=0.0743;MQ=50.09;MQ0=1;MQRankSum=-1.466;QD=13.94;ReadPosRankSum=3.642;VQSLOD=0.5104;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:7,0:7:18.63:19,0,95	1/1:3,0:2:2.97:20,3,0	0/0:2,0:1:3.01:0,3,30	0/0:1,0:1:3:0,3,26	1/1:0,7:7:17.66:206,18,0	0/1:10,0:10:14.90:114,0,15	1/1:1,0:1:3.01:34,3,0	0/1:20,0:20:0.71:1,0,215	1/1:3,0:3:3.01:34,3,0	0/1:10,0:10:31.89:131,0,32	1/1:6,0:6:17.76:128,18,0	1/1:6,0:6:9:90,9,0	1/1:3,0:3:2.67:33,3,0	1/1:5,0:5:9.03:102,9,0	0/1:6,0:6:12.96:172,0,13	0/1:5,0:5:52.95:118,0,53	0/0:15,0:15:34.32:0,34,484	0/0:8,0:8:14.15:0,14,97	0/0:7,0:6:15.05:0,15,302	0/0:3,0:3:8.92:0,9,67	./.	./.	1/1:5,0:5:3.01:34,3,0	./.	1/1:2,0:2:0.89:2,1,0	0/1:9,0:9:69.92:204,0,70	0/1:13,0:13:13.90:483,0,14	0/1:17,0:15:99:158,0,187
chr10	23296634	.	TATTATTATC	T	2426.51	PASS	AB=1.000;AC=30;AF=0.600;AN=50;BaseQRankSum=7.327;DP=181;FS=8.227;HRun=0;HaplotypeScore=67.8286;InbreedingCoeff=0.2353;MQ=50.89;MQ0=1;MQRankSum=-0.417;QD=20.05;ReadPosRankSum=3.431;VQSLOD=0.5224;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:7,0:7:35.75:36,0,86	1/1:0,3:2:2.97:20,3,0	0/0:2,0:1:3.01:0,3,30	0/0:1,0:1:3:0,3,26	1/1:7,0:7:17.66:165,18,0	1/1:1,7:8:8.95:202,9,0	1/1:0,2:2:3.01:92,3,0	0/0:22,0:22:29.44:0,29,312	1/1:0,3:3:3.01:92,3,0	1/1:1,10:11:26.92:264,27,0	1/1:0,7:7:20.73:206,21,0	1/1:0,6:6:9.03:266,9,0	1/1:0,2:2:2.76:92,3,0	1/1:0,5:5:9.03:277,9,0	0/1:7,0:7:33.95:106,0,34	0/1:5,0:5:52.95:76,0,53	0/0:15,0:15:21.72:0,22,188	0/0:8,0:8:11.19:0,11,78	0/0:6,0:5:2.80:0,3,62	0/0:5,0:5:14.91:0,15,117	./.	./.	1/1:0,6:6:2.97:92,3,0	./.	1/1:2,0:2:6.01:77,6,0	0/1:10,0:10:95.07:117,0,95	0/1:13,0:13:13.90:315,0,14	0/1:17,0:15:95.30:95,0,187
chr10	23296965	.	CCAA	C	11126.64	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-12.883;DP=512;FS=8.220;HRun=0;HaplotypeScore=99.7265;InbreedingCoeff=0.9965;MQ=72.12;MQ0=0;MQRankSum=0.055;QD=43.98;ReadPosRankSum=4.092;VQSLOD=6.6486;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:62.90:0,63,696	1/1:0,8:8:20.99:347,21,0	0/0:13,0:12:35.61:0,36,438	0/0:14,0:13:16.61:0,17,337	1/1:0,32:32:96.26:1699,96,0	1/1:0,17:17:45.15:825,45,0	1/1:0,10:10:20.94:387,21,0	0/0:21,0:21:35.78:0,36,299	1/1:0,12:12:30.10:543,30,0	1/1:0,33:34:99:1392,99,0	1/1:0,21:21:60.11:1034,60,0	1/1:0,14:14:24.08:421,24,0	1/1:0,17:17:39.13:694,39,0	1/1:0,17:17:36.12:662,36,0	0/0:17,0:17:33.48:0,33,258	0/0:17,0:17:42.26:0,42,216	0/0:21,0:21:47.71:0,48,532	0/0:15,0:15:36.11:0,36,423	0/0:27,0:27:79.82:0,80,943	0/0:17,0:17:51.11:0,51,592	0/0:13,0:13:36.11:0,36,427	1/1:0,11:12:32.88:526,33,0	1/1:0,23:23:59.95:1061,60,0	1/1:0,24:24:54.18:989,54,0	1/1:0,12:12:30.10:546,30,0	0/0:21,0:21:31.42:0,31,243	0/0:31,0:30:75.77:0,76,372	0/0:9,0:9:25.22:0,25,130
chr10	23296966	.	CAA	C	5982.92	PASS	AB=0.538;AC=41;AF=0.732;AN=56;BaseQRankSum=4.068;DP=513;FS=1.905;HRun=11;HaplotypeScore=108.4321;InbreedingCoeff=0.9008;MQ=72.22;MQ0=0;MQRankSum=-3.450;QD=15.42;ReadPosRankSum=3.305;VQSLOD=3.7306;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:3,1:23:16.52:0,17,142	1/1:8,0:8:17.45:98,17,0	0/0:11,0:12:23.49:0,23,197	0/0:12,1:14:19.65:0,20,197	1/1:32,0:32:85.84:484,86,0	1/1:17,0:17:43.59:244,44,0	1/1:10,0:10:20.30:115,20,0	1/1:4,17:21:51.09:528,51,0	1/1:12,0:12:28.96:159,29,0	1/1:34,0:34:46.67:297,47,0	1/1:21,0:21:49.87:286,50,0	1/1:14,0:14:20.26:112,20,0	1/1:17,0:17:34.67:192,35,0	1/1:17,0:17:34.90:197,35,0	1/1:5,10:16:29.80:299,30,0	1/1:2,15:17:39.09:415,39,0	0/1:3,2:21:27.41:27,0,82	0/0:3,0:17:33.40:0,33,136	0/0:6,1:27:24.69:0,25,209	0/0:2,0:17:37.78:0,38,140	0/0:0,0:13:29.94:0,30,103	1/1:12,0:12:29.11:170,29,0	1/1:23,0:23:55.06:309,55,0	1/1:24,0:24:52.35:293,52,0	1/1:12,0:12:28.97:161,29,0	1/1:2,19:21:57.13:607,57,0	1/1:2,28:30:72.18:766,72,0	1/1:2,7:9:21.04:224,21,0
chr10	23298679	.	T	TGC	173.77	PASS	AC=6;AF=0.158;AN=38;BaseQRankSum=2.244;DP=392;FS=0.000;HRun=0;HaplotypeScore=21.5263;InbreedingCoeff=0.4648;MQ=13.09;MQ0=305;MQRankSum=-0.693;QD=3.00;ReadPosRankSum=0.388;VQSLOD=0.9839;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:8,0:4:12.04:0,12,176	./.	./.	0/0:12,0:7:3.01:0,3,44	0/0:15,0:5:12.04:0,12,176	0/0:26,0:1:3.01:0,3,44	./.	0/0:19,0:3:9.03:0,9,132	0/0:12,0:8:24.08:0,24,353	0/0:7,0:6:6.02:0,6,88	0/0:17,0:6:6.02:0,6,88	0/0:8,0:1:3.01:0,3,44	0/0:14,0:3:6.02:0,6,88	0/0:8,0:1:3.01:0,3,44	0/0:14,0:3:6.02:0,6,88	1/1:32,3:3:6.02:112,6,0	./.	1/1:18,1:1:3.01:56,3,0	1/1:2,2:3:6.02:111,6,0	./.	./.	./.	./.	0/0:10,0:8:24.08:0,24,353	0/0:19,0:7:21.07:0,21,309	0/0:17,0:5:15.05:0,15,215	0/0:7,0:2:6.02:0,6,82
chr10	23304805	.	A	AG	1806.32	PASS	AC=34;AF=1.000;AN=34;DP=130;FS=0.000;HRun=6;HaplotypeScore=10.8195;InbreedingCoeff=-0.0953;MQ=19.53;MQ0=56;QD=16.57;VQSLOD=1.1676;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,6:3:9.03:123,9,0	./.	./.	./.	1/1:3,4:4:6.02:82,6,0	1/1:3,1:2:3.01:41,3,0	1/1:3,3:3:9.03:116,9,0	1/1:3,7:7:21.07:284,21,0	./.	1/1:4,1:1:3.01:41,3,0	1/1:3,6:6:12.04:156,12,0	1/1:2,4:4:12.04:152,12,0	./.	1/1:1,1:1:3.01:41,3,0	1/1:4,3:3:9.03:123,9,0	1/1:1,3:3:9.03:123,9,0	./.	1/1:1,2:2:6.02:82,6,0	1/1:5,2:3:3.01:41,3,0	./.	./.	./.	./.	./.	1/1:3,8:9:18.06:239,18,0	1/1:3,1:2:6.02:80,6,0	1/1:4,3:6:9.03:118,9,0	1/1:3,2:1:3.01:41,3,0
chr10	23304875	.	T	TAA	4346.07	PASS	AB=1.000;AC=51;AF=0.911;AN=56;BaseQRankSum=-2.913;DP=233;FS=25.873;HRun=10;HaplotypeScore=37.6027;InbreedingCoeff=0.4421;MQ=51.79;MQ0=23;MQRankSum=0.616;QD=19.23;ReadPosRankSum=1.317;VQSLOD=1.5996;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:9,5:10:21.48:255,21,0	1/1:1,0:4:9.01:86,9,0	0/0:4,0:3:2.96:0,3,25	0/0:3,0:2:6.01:0,6,60	1/1:6,0:10:17.90:158,18,0	1/1:5,0:10:21.03:200,21,0	1/1:2,0:2:6.01:57,6,0	1/1:7,16:25:48.09:652,48,0	1/1:2,0:5:6.01:57,6,0	1/1:6,0:10:15.02:143,15,0	1/1:12,0:16:23.99:216,24,0	1/1:8,0:9:7.39:70,7,0	1/1:0,0:3:9.01:86,9,0	1/1:2,0:5:14.99:134,15,0	1/1:3,0:7:14.97:53,15,0	1/1:2,0:5:7.49:26,7,0	1/1:1,10:12:29.59:411,30,0	1/1:3,6:10:24.07:326,24,0	1/1:5,1:3:6.02:77,6,0	1/1:1,9:10:27.09:402,27,0	1/1:1,1:4:5.51:53,6,0	1/1:0,0:1:3:28,3,0	1/1:0,1:2:3:29,3,0	0/1:2,0:1:0:0,0,0	1/1:7,0:10:9.01:86,9,0	1/1:1,9:11:27.09:402,27,0	1/1:4,9:12:21.07:313,21,0	1/1:4,1:2:3.87:25,4,0
chr10	23305281	.	A	AAGGTGGAA	7674.90	PASS	AB=0.789;AC=50;AF=0.962;AN=52;BaseQRankSum=0.027;DP=176;FS=36.712;HRun=0;HaplotypeScore=95.3687;InbreedingCoeff=-0.0684;MQ=79.73;MQ0=0;MQRankSum=-4.599;QD=43.86;ReadPosRankSum=2.354;VQSLOD=2.3924;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,0:3:9.03:220,9,0	1/1:4,0:4:12.04:257,12,0	0/1:5,1:7:99:197,0,160	0/1:6,1:8:99:237,0,174	1/1:11,0:11:23.10:278,23,0	1/1:12,0:12:31.56:559,32,0	1/1:3,0:3:9.02:110,9,0	1/1:9,0:9:24.08:523,24,0	1/1:8,0:8:23.99:297,24,0	1/1:8,0:8:24.04:463,24,0	1/1:9,0:9:23.52:323,24,0	1/1:6,0:6:17.89:230,18,0	1/1:8,0:8:12.44:232,12,0	1/1:10,0:10:30.10:596,30,0	1/1:6,0:6:18.06:252,18,0	1/1:5,0:5:15.05:307,15,0	1/1:5,0:5:9.03:123,9,0	./.	1/1:3,0:3:9:117,9,0	1/1:10,0:10:27.08:532,27,0	1/1:2,0:2:6.02:85,6,0	1/1:4,0:4:12.04:164,12,0	1/1:4,0:4:12.04:248,12,0	./.	1/1:9,0:9:15.05:215,15,0	1/1:11,0:11:33.11:619,33,0	1/1:9,0:9:27.09:406,27,0	1/1:1,0:1:3.01:87,3,0
chr10	23307386	.	TAA	T	861.59	PASS	AB=1.000;AC=45;AF=0.900;AN=50;BaseQRankSum=-2.453;DP=199;FS=0.864;HRun=3;HaplotypeScore=63.4666;InbreedingCoeff=0.2570;MQ=77.67;MQ0=5;MQRankSum=-1.148;QD=7.43;ReadPosRankSum=0.603;VQSLOD=0.2253;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,0:5:5.30:25,5,0	./.	0/0:20,0:7:5.77:0,6,34	0/0:59,0:20:31.38:0,31,303	1/1:3,3:6:10.87:72,11,0	1/1:3,4:7:10.33:112,10,0	1/1:1,0:1:2.22:7,2,0	0/1:21,0:21:10.56:70,0,11	1/1:2,1:3:8.37:61,8,0	1/1:3,2:5:7.95:68,8,0	1/1:3,1:3:7.75:43,8,0	1/1:1,0:1:2.50:9,2,0	1/1:6,1:7:3.32:37,3,0	1/1:2,0:2:2.37:8,2,0	1/1:2,0:2:2.22:7,2,0	1/1:0,3:3:6.01:56,6,0	1/1:5,1:5:1.41:24,1,0	1/1:6,5:11:21.16:123,21,0	1/1:4,1:5:2.52:28,3,0	1/1:2,0:2:5.96:45,6,0	1/1:3,0:3:6.30:19,6,0	./.	1/1:3,0:3:3:25,3,0	./.	1/1:3,1:3:3:28,3,0	1/1:4,0:4:4.57:15,5,0	1/1:4,1:5:5.77:56,6,0	1/1:5,1:6:7.75:44,8,0
chr10	23307387	.	A	AT	3062.68	PASS	AB=0.708;AC=44;AF=0.880;AN=50;BaseQRankSum=-3.331;DP=190;FS=2.369;HRun=1;HaplotypeScore=51.8626;InbreedingCoeff=0.3228;MQ=76.43;MQ0=5;MQRankSum=-2.094;QD=28.36;ReadPosRankSum=1.848;VQSLOD=3.5329;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,4:4:5.93:64,6,0	./.	0/0:19,0:6:5.97:0,6,50	0/0:59,1:20:36.88:0,37,330	1/1:5,0:5:11.77:126,12,0	1/1:6,1:7:17.72:168,18,0	1/1:0,1:1:3.01:47,3,0	1/1:0,20:20:60.19:934,60,0	1/1:3,0:3:8.91:89,9,0	1/1:3,2:5:14.88:177,15,0	1/1:1,3:3:8.92:111,9,0	1/1:1,0:1:3.01:48,3,0	1/1:1,6:7:11.91:159,12,0	1/1:1,0:1:3.01:48,3,0	1/1:0,2:2:3.01:47,3,0	1/1:3,0:3:5.81:32,6,0	0/1:3,3:5:2.92:23,0,3	1/1:6,4:10:23.60:282,24,0	1/1:2,3:5:12.03:170,12,0	1/1:2,0:2:6.01:70,6,0	1/1:0,3:3:9.03:142,9,0	./.	1/1:1,0:1:3:25,3,0	./.	1/1:1,3:3:2.90:16,3,0	0/1:2,1:3:0.31:87,0,0	1/1:3,2:5:14.94:205,15,0	1/1:6,0:6:8.92:112,9,0
chr10	23307389	.	AT	A	1244.49	PASS	AB=0.917;AC=43;AF=0.896;AN=48;BaseQRankSum=-2.269;DP=189;FS=0.000;HRun=1;HaplotypeScore=59.7478;InbreedingCoeff=0.1034;MQ=75.29;MQ0=7;MQRankSum=-2.584;QD=7.54;ReadPosRankSum=1.137;VQSLOD=0.6852;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,0:2:3:30,3,0	./.	0/0:21,0:6:3.01:0,3,33	0/1:64,0:20:1.13:1,0,284	1/1:3,2:5:11.57:72,12,0	1/1:6,1:7:10.81:60,11,0	1/1:1,0:1:3.01:30,3,0	1/1:19,0:19:46.56:314,47,0	1/1:1,1:2:5.79:36,6,0	1/1:4,1:5:7.85:67,8,0	1/1:4,0:3:8.79:67,9,0	1/1:0,1:1:2.99:23,3,0	1/1:5,0:5:8.24:64,8,0	1/1:0,1:1:2.99:23,3,0	1/1:2,0:2:2.98:21,3,0	1/1:3,0:3:5.60:25,6,0	0/1:6,0:5:9.49:9,0,12	1/1:9,1:10:22.66:171,23,0	1/1:4,0:4:1.68:36,2,0	1/1:1,0:1:2.97:20,3,0	1/1:3,0:3:9.02:93,9,0	./.	./.	./.	1/1:4,0:3:2.80:13,3,0	0/1:2,1:3:9.34:40,0,9	1/1:4,1:5:11.41:82,11,0	1/1:1,5:6:8.73:59,9,0
chr10	23307391	.	ATATATATATATAAATATAAT	A	4904.32	PASS	AC=42;AF=0.913;AN=46;BaseQRankSum=-2.676;DP=189;FS=2.233;HRun=0;HaplotypeScore=94.8525;InbreedingCoeff=0.4454;MQ=74.55;MQ0=7;MQRankSum=-2.193;QD=51.62;ReadPosRankSum=2.193;VQSLOD=4.0129;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,0:2:2.98:22,3,0	./.	0/0:23,0:6:12.02:0,12,195	0/0:67,0:20:43.06:0,43,810	1/1:2,3:5:12.59:355,13,0	1/1:2,4:6:18.05:613,18,0	1/1:1,0:1:2.98:22,3,0	1/1:18,0:18:47.64:437,48,0	1/1:1,1:2:3.90:159,4,0	1/1:3,2:5:12.90:369,13,0	1/1:3,1:3:8.99:202,9,0	1/1:1,0:1:3:27,3,0	1/1:4,1:5:12:237,12,0	1/1:1,0:1:1.55:4,2,0	1/1:2,0:2:3.01:82,3,0	1/1:0,3:3:9.03:420,9,0	1/1:5,1:5:9.03:360,9,0	1/1:5,5:10:24.87:761,25,0	1/1:3,1:4:9.02:90,9,0	./.	1/1:3,0:3:8.93:63,9,0	./.	./.	./.	1/1:2,1:2:3.01:157,3,0	1/1:3,0:3:6.88:174,7,0	1/1:3,1:4:8.45:190,8,0	1/1:5,1:6:4.78:161,5,0
chr10	23307409	.	AAT	A	2159.64	PASS	AB=1.000;AC=33;AF=0.917;AN=36;BaseQRankSum=-1.080;DP=178;FS=5.604;HRun=0;HaplotypeScore=63.9481;InbreedingCoeff=0.2106;MQ=74.11;MQ0=9;MQRankSum=-1.184;QD=14.69;ReadPosRankSum=1.512;VQSLOD=3.0596;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:25,0:4:5.96:0,6,49	0/1:75,0:23:11.92:12,0,154	1/1:3,4:7:18.06:222,18,0	1/1:4,4:8:18.06:225,18,0	./.	1/1:1,11:12:33.11:438,33,0	1/1:1,1:2:6.02:74,6,0	1/1:2,2:4:12.04:147,12,0	1/1:1,0:1:3.01:35,3,0	1/1:0,2:2:3.01:34,3,0	1/1:1,0:1:3.01:34,3,0	./.	./.	1/1:3,1:4:12.04:144,12,0	1/1:1,4:4:12.04:152,12,0	1/1:5,4:9:20.96:243,21,0	1/1:1,6:7:18.06:239,18,0	./.	./.	./.	./.	./.	1/1:1,0:1:3.01:35,3,0	1/1:0,2:2:6.02:80,6,0	1/1:1,4:5:9.03:110,9,0	1/1:1,0:1:3.01:35,3,0
chr10	23307640	.	GATT	G	8964.75	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=1.747;DP=239;FS=3.760;HRun=0;HaplotypeScore=74.6408;InbreedingCoeff=0.6439;MQ=58.46;MQ0=0;MQRankSum=-5.558;QD=40.93;ReadPosRankSum=3.998;VQSLOD=5.8853;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,15:15:24.08:399,24,0	1/1:1,5:5:12.04:197,12,0	0/0:11,0:9:26.71:0,27,391	0/0:8,0:6:14.97:0,15,335	1/1:2,3:5:9.02:126,9,0	1/1:4,15:19:57.18:921,57,0	1/1:1,7:8:24.07:363,24,0	1/1:8,15:22:45.11:818,45,0	1/1:1,3:4:12:169,12,0	1/1:1,1:2:6.02:96,6,0	1/1:2,6:8:21.07:349,21,0	1/1:0,8:8:18.06:299,18,0	1/1:0,5:5:15.05:249,15,0	1/1:3,5:8:21.07:347,21,0	1/1:0,4:4:12.04:199,12,0	1/1:1,7:8:24.08:397,24,0	1/1:2,9:11:24.08:398,24,0	1/1:2,15:17:39.11:622,39,0	1/1:2,10:12:33.11:547,33,0	1/1:1,5:6:18.06:294,18,0	1/1:2,2:4:6.01:77,6,0	1/1:0,1:1:3.01:50,3,0	1/1:0,1:1:3.01:49,3,0	1/1:1,0:1:3.01:47,3,0	1/1:3,10:11:33.10:526,33,0	1/1:4,7:11:33.08:478,33,0	1/1:1,13:14:42.14:698,42,0	1/1:0,5:5:15.05:250,15,0
chr10	23307661	.	A	ATT	9010.16	PASS	AB=0.980;AC=52;AF=0.963;AN=54;BaseQRankSum=1.943;DP=301;FS=10.785;HRun=7;HaplotypeScore=107.8988;InbreedingCoeff=0.1068;MQ=50.59;MQ0=2;MQRankSum=-3.132;QD=30.03;ReadPosRankSum=1.364;VQSLOD=3.6832;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,10:13:33.11:539,33,0	1/1:0,7:6:18.06:295,18,0	0/1:23,0:12:8.05:8,0,79	0/1:23,0:13:7.25:7,0,122	1/1:0,9:9:24.08:392,24,0	1/1:2,18:20:57.16:905,57,0	1/1:2,7:9:24.08:384,24,0	1/1:14,16:28:48.12:758,48,0	1/1:2,7:9:27.08:403,27,0	1/1:1,4:5:12.04:197,12,0	1/1:2,9:10:24.08:393,24,0	1/1:3,5:8:18.05:271,18,0	1/1:0,6:6:18.06:295,18,0	1/1:3,4:7:18.02:260,18,0	1/1:3,2:5:6.02:98,6,0	1/1:2,6:8:18.06:295,18,0	1/1:5,8:13:27.05:405,27,0	1/1:4,14:18:43.70:685,44,0	1/1:10,9:18:24.08:393,24,0	1/1:1,5:6:18.02:266,18,0	1/1:2,2:4:5.98:69,6,0	./.	1/1:1,0:1:2.97:20,3,0	1/1:0,1:1:3.01:49,3,0	1/1:6,7:12:24:335,24,0	1/1:0,11:11:33.11:539,33,0	1/1:3,11:14:39.06:583,39,0	1/1:3,3:6:11.99:164,12,0
chr10	23307680	.	ATCGT	A	7066.62	PASS	AB=0.981;AC=52;AF=0.963;AN=54;BaseQRankSum=3.556;DP=276;FS=7.246;HRun=0;HaplotypeScore=115.2277;InbreedingCoeff=0.0035;MQ=58.97;MQ0=1;MQRankSum=-3.655;QD=25.60;ReadPosRankSum=4.088;VQSLOD=4.1876;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,6:12:23.37:321,23,0	1/1:0,4:4:9.92:141,10,0	0/1:24,0:15:32.83:33,0,360	0/1:24,0:15:9.23:9,0,345	1/1:2,10:12:33.03:451,33,0	1/1:1,20:21:53.78:773,54,0	1/1:3,7:10:18.16:313,18,0	1/1:10,16:20:33.97:405,34,0	1/1:0,9:9:27.09:419,27,0	1/1:0,4:4:12.04:189,12,0	1/1:1,10:10:23.18:326,23,0	1/1:1,2:4:9.91:120,10,0	1/1:4,4:8:7.43:94,7,0	1/1:3,6:9:18.50:240,18,0	1/1:0,5:5:15.05:227,15,0	1/1:2,5:7:16.41:227,16,0	1/1:3,10:13:26.68:369,27,0	1/1:2,12:14:28.92:406,29,0	1/1:1,8:9:21.54:312,22,0	1/1:0,4:4:9.50:138,10,0	1/1:0,3:3:9.03:137,9,0	./.	1/1:0,5:5:12.04:192,12,0	1/1:1,2:3:3.76:47,4,0	1/1:2,6:7:15.99:230,16,0	1/1:3,9:12:28.03:399,28,0	1/1:1,10:11:28.45:415,28,0	1/1:0,3:3:9.03:131,9,0
chr10	23310868	.	G	GA	948.54	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-7.265;DP=572;FS=3.372;HRun=8;HaplotypeScore=52.3368;InbreedingCoeff=0.9886;MQ=75.37;MQ0=0;MQRankSum=-1.982;QD=27.10;ReadPosRankSum=1.241;VQSLOD=4.4123;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:50.15:0,50,459	0/0:10,0:10:27.01:0,27,247	0/0:15,0:15:36:0,36,324	0/0:10,0:10:15:0,15,137	0/0:32,0:32:84.01:0,84,761	0/0:25,0:24:75.04:0,75,686	0/0:13,0:13:36.01:0,36,329	0/0:34,0:34:80.97:0,81,727	0/0:19,0:19:45.01:0,45,412	0/0:25,0:25:66.02:0,66,602	0/0:23,0:23:66.02:0,66,599	0/0:19,0:19:48.02:0,48,439	0/0:25,0:25:63.03:0,63,577	0/0:20,0:20:57.03:0,57,522	1/1:2,17:19:51.15:589,51,0	1/1:3,13:16:42.12:482,42,0	0/0:22,0:22:63.03:0,63,576	0/0:22,0:22:51:0,51,467	0/0:13,0:13:30.01:0,30,275	0/0:26,0:26:72.03:0,72,654	0/0:19,0:19:45:0,45,406	0/0:18,0:18:48.02:0,48,439	0/0:20,0:20:48.01:0,48,439	0/0:11,0:11:33.02:0,33,302	0/0:30,1:31:75:0,75,678	0/0:27,0:29:76.10:0,76,668	0/0:29,0:29:78.01:0,78,704	0/0:8,0:8:21.01:0,21,192
chr10	23311575	.	TCAAACAAA	T	3718.83	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-8.070;DP=669;FS=0.542;HRun=0;HaplotypeScore=233.8949;InbreedingCoeff=0.9896;MQ=70.00;MQ0=0;MQRankSum=-5.265;QD=41.78;ReadPosRankSum=1.542;VQSLOD=3.3967;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,99,3249	0/0:9,0:9:15.05:0,15,451	0/0:40,0:34:48.12:0,48,1354	0/0:27,0:22:30.10:0,30,908	0/0:28,0:28:54.19:0,54,1705	0/0:28,0:28:45.15:0,45,1483	0/0:18,0:18:18.03:0,18,490	1/1:20,9:29:27.05:470,27,0	0/0:20,0:20:27.09:0,27,894	0/0:34,0:34:59.88:0,60,1818	0/0:18,0:18:30.10:0,30,808	0/0:20,0:20:36.12:0,36,1161	0/0:16,0:16:36.12:0,36,1162	0/0:24,0:24:51.18:0,51,1650	0/0:6,0:23:38.96:0,39,321	0/0:1,0:20:41.95:0,42,346	0/0:26,0:26:45.13:0,45,1411	0/0:25,0:25:42.14:0,42,1388	0/0:22,0:22:39.13:0,39,1022	0/0:22,0:22:27.09:0,27,803	0/0:27,0:27:36.12:0,36,1182	0/0:29,0:29:60.68:0,61,1828	0/0:17,0:17:33.58:0,34,1030	0/0:20,0:20:33.11:0,33,1093	0/0:19,0:18:36.12:0,36,1182	1/1:4,20:24:57.14:1196,57,0	1/1:6,21:28:63.22:1615,63,0	1/1:1,7:8:18.06:438,18,0
chr10	23311584	.	C	CAAAG	21325.56	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-10.148;DP=722;FS=0.000;HRun=0;HaplotypeScore=139.1279;InbreedingCoeff=0.9760;MQ=64.06;MQ0=1;MQRankSum=1.950;QD=41.01;ReadPosRankSum=3.046;VQSLOD=5.2829;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,47:54:88.47:2590,88,0	1/1:0,11:12:17.98:377,18,0	0/0:43,0:34:73.11:0,73,928	0/0:25,0:20:53.85:0,54,617	1/1:0,25:27:77.68:1448,78,0	1/1:0,27:28:45.15:1168,45,0	1/1:2,19:22:4.83:273,5,0	0/0:27,0:27:71.31:0,71,590	1/1:1,22:26:26.83:727,27,0	1/1:0,33:35:96.07:1748,96,0	1/1:1,20:23:34.56:699,35,0	1/1:2,25:27:36.12:967,36,0	1/1:0,15:16:36.12:904,36,0	1/1:1,29:34:51.17:1281,51,0	0/0:23,0:23:48.09:0,48,509	0/0:20,0:20:45.11:0,45,493	1/1:2,22:24:28.32:1114,28,0	1/1:3,24:28:45.15:1210,45,0	1/1:3,22:28:74.95:1051,75,0	1/1:2,21:25:56.46:779,56,0	1/1:1,25:26:36.12:927,36,0	1/1:1,28:29:71.83:1393,72,0	1/1:1,17:19:30.90:821,31,0	1/1:1,17:18:33.11:889,33,0	1/1:0,19:18:36.12:961,36,0	0/0:26,0:26:65.99:0,66,636	0/0:29,0:29:78.12:0,78,778	0/0:9,0:9:20.88:0,21,180
chr10	23312141	.	C	CT	24160.54	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-6.020;DP=642;FS=1.252;HRun=1;HaplotypeScore=70.6832;InbreedingCoeff=0.9939;MQ=88.45;MQ0=0;MQRankSum=-10.414;QD=40.81;ReadPosRankSum=6.657;VQSLOD=4.7769;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,24:24:72.24:1079,72,0	1/1:1,5:6:18.06:267,18,0	0/0:23,0:23:63.14:0,63,767	0/0:27,0:26:65.79:0,66,821	1/1:0,19:19:45.15:674,45,0	1/1:0,27:27:75.25:1124,75,0	1/1:0,17:17:51.17:765,51,0	1/1:2,11:13:33.11:495,33,0	1/1:0,18:18:45.15:675,45,0	1/1:0,41:41:99:1754,117,0	1/1:2,26:28:78.26:1151,78,0	1/1:0,21:21:54.18:809,54,0	1/1:0,21:21:57.19:854,57,0	1/1:1,25:26:69.23:1034,69,0	1/1:3,30:33:84.28:1259,84,0	1/1:2,25:27:81.23:1189,81,0	1/1:1,33:34:96.33:1439,96,0	1/1:0,8:8:24.08:360,24,0	1/1:2,10:12:30.10:450,30,0	1/1:2,22:24:54.18:810,54,0	1/1:0,28:28:78.26:1169,78,0	1/1:0,23:23:69.15:984,69,0	1/1:0,14:14:42.14:630,42,0	1/1:1,15:16:45.15:675,45,0	1/1:1,23:24:66.22:989,66,0	1/1:2,34:36:99:1548,105,0	1/1:2,40:41:99:1573,105,0	1/1:1,9:10:27.09:405,27,0
chr10	23314492	.	T	TATAG	9022.06	PASS	AB=0.714;AC=47;AF=0.904;AN=52;BaseQRankSum=-3.500;DP=542;FS=0.884;HRun=0;HaplotypeScore=103.1726;InbreedingCoeff=0.5723;MQ=60.49;MQ0=5;MQRankSum=-0.107;QD=18.72;ReadPosRankSum=0.102;VQSLOD=4.2314;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:19:0.47:1,0,0	1/1:4,5:9:15.05:351,15,0	./.	./.	1/1:14,12:26:27.09:631,27,0	1/1:10,13:26:24.08:561,24,0	1/1:9,4:13:3.01:70,3,0	1/1:37,0:37:14.92:139,15,0	1/1:9,2:11:3.01:70,3,0	1/1:18,10:29:11.24:859,11,0	1/1:14,10:24:27.09:594,27,0	0/1:9,6:15:3.85:399,0,4	1/1:13,7:21:15.05:348,15,0	1/1:4,13:17:27.09:631,27,0	0/0:25,0:25:39.13:0,39,600	0/0:17,0:17:18.06:0,18,277	1/1:11,10:21:17.99:368,18,0	1/1:20,0:20:22.28:271,22,0	1/1:12,4:18:18.03:344,18,0	1/1:10,16:26:42.14:940,42,0	1/1:9,2:11:6.02:140,6,0	1/1:6,3:10:6.02:137,6,0	1/1:15,5:20:12.04:278,12,0	1/1:1,6:7:12.04:281,12,0	1/1:11,9:20:21.07:477,21,0	1/1:4,0:42:42.54:706,43,0	1/1:4,0:29:18.06:295,18,0	1/1:7,0:7:6.02:130,6,0
chr10	23316163	.	C	CTT	4613.35	PASS	AB=0.587;AC=42;AF=0.750;AN=56;BaseQRankSum=4.651;DP=617;FS=4.303;HRun=11;HaplotypeScore=99.6209;InbreedingCoeff=0.3976;MQ=72.47;MQ0=0;MQRankSum=-2.433;QD=8.50;ReadPosRankSum=-0.846;VQSLOD=2.6893;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,4:9:15.52:207,16,0	1/1:1,0:8:17.47:60,17,0	0/0:14,0:16:13.75:0,14,177	0/0:16,0:13:16.17:0,16,129	1/1:6,3:33:38.76:294,39,0	0/1:8,4:26:58.58:199,0,59	0/1:4,0:15:32.22:43,0,32	1/1:12,4:43:92.58:904,93,0	1/1:4,1:24:5.23:131,5,0	1/1:8,0:34:38.39:263,38,0	1/1:3,1:29:62.42:293,62,0	0/1:4,3:15:2.09:155,0,2	0/1:6,1:34:17.83:175,0,18	1/1:4,0:27:47:163,47,0	0/0:21,0:21:48.03:0,48,466	0/0:18,0:20:16.42:0,16,402	1/1:5,1:12:6.87:90,7,0	1/1:4,0:11:17.34:60,17,0	0/1:9,0:22:9.34:80,0,9	1/1:9,1:35:11.18:202,11,0	0/1:4,0:18:56.63:57,0,74	1/1:4,0:28:40.42:159,40,0	1/1:6,1:32:11.96:160,12,0	1/1:1,0:8:14.97:51,15,0	1/1:6,0:23:14.01:111,14,0	1/1:7,6:26:56.47:531,56,0	1/1:11,0:23:15.02:142,15,0	1/1:3,0:8:9.01:86,9,0
chr10	23317102	.	GAGAT	G	657.61	PASS	AB=0.989;AC=5;AF=0.089;AN=56;BaseQRankSum=8.355;DP=757;FS=8.441;HRun=0;HaplotypeScore=187.1746;InbreedingCoeff=0.7468;MQ=72.54;MQ0=11;MQRankSum=-1.538;QD=5.57;ReadPosRankSum=-1.785;VQSLOD=1.5444;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:34:69.15:0,69,1716	0/0:11,0:11:24.41:0,24,510	0/0:58,0:27:42.23:0,42,765	0/1:86,0:49:2.56:3,0,489	0/0:25,0:25:60.08:0,60,1441	0/0:24,0:22:51.09:0,51,1256	0/0:12,0:12:36.12:0,36,840	0/0:29,0:29:84.26:0,84,1719	0/0:24,0:24:69.23:0,69,1738	0/0:31,0:31:51.59:0,52,1354	0/0:26,0:26:65.73:0,66,1613	0/0:23,0:23:57.19:0,57,1330	0/0:25,0:25:60.17:0,60,1303	0/0:27,0:27:68.41:0,68,1607	1/1:3,17:20:20.70:398,21,0	1/1:1,10:11:23.96:378,24,0	0/0:13,0:13:21.92:0,22,460	0/0:15,0:14:0.15:0,0,606	0/0:29,0:29:78.21:0,78,1706	0/0:28,0:28:75.04:0,75,1833	0/0:28,0:28:48.12:0,48,1151	0/0:27,0:27:57.12:0,57,1333	0/0:21,0:21:45.14:0,45,1072	0/0:32,0:32:69.23:0,69,1695	0/0:23,0:23:41.69:0,42,965	0/0:32,0:32:52.32:0,52,1645	0/0:32,0:32:52.37:0,52,1898	0/0:9,0:9:15.34:0,15,501
chr10	23317144	.	AAG	A	1096.89	PASS	AB=0.908;AC=22;AF=0.407;AN=54;BaseQRankSum=2.631;DP=726;FS=1.147;HRun=0;HaplotypeScore=165.9173;InbreedingCoeff=-0.1300;MQ=61.58;MQ0=26;MQRankSum=-1.040;QD=2.94;ReadPosRankSum=3.939;VQSLOD=2.7691;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:39:25.52:0,26,161	0/1:6,3:9:47.28:108,0,47	0/0:71,0:24:0:0,0,0	./.	0/1:21,0:19:6.19:6,0,290	1/1:13,7:18:20.83:226,21,0	0/1:9,1:10:21.24:21,0,123	0/0:19,0:21:5.04:0,5,16	0/0:21,0:21:29.84:0,30,409	1/1:15,9:24:38.14:355,38,0	0/1:17,3:20:23.90:123,0,24	0/0:23,0:23:30.10:0,30,438	0/1:19,1:21:14.33:14,0,336	0/1:21,2:23:33.61:34,0,313	0/1:25,0:29:28.95:29,0,42	0/0:18,0:21:4.48:0,4,71	0/0:9,0:9:1.72:0,2,5	0/1:13,0:13:23.75:24,0,25	1/1:17,0:19:5.80:46,6,0	1/1:19,0:28:4.25:32,4,0	0/0:23,0:25:3.33:0,3,15	0/1:25,3:28:53.39:53,0,407	0/1:19,2:20:0.13:0,0,416	0/0:27,0:27:42.14:0,42,624	0/1:18,2:22:59.13:59,0,305	0/1:27,0:30:55.19:55,0,190	0/1:24,0:26:64.18:64,0,65	0/1:7,0:7:3.76:4,0,17
chr10	23317182	.	GCA	G	499.29	PASS	AB=0.908;AC=12;AF=0.214;AN=56;BaseQRankSum=7.371;DP=686;FS=3.557;HRun=0;HaplotypeScore=148.8115;InbreedingCoeff=-0.0431;MQ=52.01;MQ0=27;MQRankSum=0.906;QD=1.72;ReadPosRankSum=-1.107;VQSLOD=2.2938;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:38,1:38:99:104,0,799	0/0:9,0:9:11.82:0,12,236	0/0:31,0:3:2.71:0,3,29	0/0:51,2:5:4.26:0,4,35	0/0:21,0:19:47.04:0,47,873	0/0:20,0:18:50.07:0,50,636	0/0:13,0:12:33.01:0,33,460	0/1:32,0:28:5.02:5,0,503	0/0:18,1:19:45.14:0,45,754	0/1:30,1:31:40.85:41,0,831	0/0:16,0:16:41.78:0,42,566	0/0:25,0:25:51.13:0,51,841	0/0:22,0:22:56.62:0,57,832	0/0:25,1:26:12.97:0,13,584	0/1:27,0:27:5.73:6,0,128	0/1:32,0:32:17.16:17,0,165	0/1:4,7:11:24.25:43,0,24	1/1:5,1:7:14.58:125,15,0	0/1:22,0:18:19:253,0,19	0/1:25,2:27:3.84:4,0,89	0/1:12,17:29:6.71:13,0,7	0/0:24,0:24:55.29:0,55,892	0/0:21,0:21:48.51:0,49,948	0/0:31,0:31:68.87:0,69,1204	0/0:27,0:27:57.40:0,57,1088	0/1:32,0:30:34.79:35,0,318	0/0:27,0:27:5.88:0,6,252	0/0:7,0:5:12.53:0,13,100
chr10	23317184	.	AAGAGCGAGAGCG	A	963.77	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=3.281;DP=692;FS=1.496;HRun=0;HaplotypeScore=247.7534;InbreedingCoeff=0.7091;MQ=52.80;MQ0=28;MQRankSum=0.615;QD=9.64;ReadPosRankSum=-4.321;VQSLOD=1.7968;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:40:53.13:0,53,2274	0/0:9,0:9:18.06:0,18,647	0/0:35,0:3:3.39:0,3,37	0/0:60,0:9:1.81:0,2,94	0/0:20,0:18:39.13:0,39,1682	0/0:20,0:18:45.15:0,45,1732	0/0:11,0:10:21.07:0,21,643	0/0:35,0:31:71.71:0,72,1115	0/0:17,0:17:36.09:0,36,1137	0/0:31,0:31:72.21:0,72,2398	0/0:17,0:17:41.96:0,42,1328	0/0:22,0:22:47.96:0,48,1788	0/0:24,0:24:47.20:0,47,1672	0/0:23,0:23:50.37:0,50,1484	0/0:27,0:26:56.85:0,57,1015	0/0:32,0:32:84.12:0,84,2049	1/1:12,0:12:8.62:99,9,0	0/1:6,0:7:34.30:95,0,34	1/1:10,14:20:44.26:745,44,0	1/1:12,15:27:17.84:124,18,0	1/1:27,1:30:2.35:50,2,0	0/0:25,0:25:54.16:0,54,2116	0/0:20,0:20:48.12:0,48,1565	0/0:29,0:29:60.02:0,60,2558	0/0:26,0:26:62.92:0,63,2164	0/0:31,0:29:66.90:0,67,1846	0/0:27,0:27:64.16:0,64,1350	0/0:10,0:8:24.07:0,24,489
chr10	23318024	.	T	TC	17859.26	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-7.129;DP=590;FS=7.140;HRun=6;HaplotypeScore=49.1743;InbreedingCoeff=0.9439;MQ=87.33;MQ0=0;MQRankSum=-9.325;QD=32.65;ReadPosRankSum=5.689;VQSLOD=4.3828;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,19:23:51.16:642,51,0	1/1:1,8:9:21.07:264,21,0	0/0:23,0:23:45.10:0,45,524	0/0:20,0:20:35.23:0,35,375	1/1:3,29:32:81.17:998,81,0	1/1:2,24:25:66.21:830,66,0	1/1:1,16:17:45.14:566,45,0	1/1:1,24:26:69.06:800,69,0	1/1:0,20:20:51.16:641,51,0	1/1:3,23:26:66.21:829,66,0	1/1:1,17:18:48.15:603,48,0	1/1:1,15:16:39.12:491,39,0	1/1:2,20:22:60.19:748,60,0	1/1:0,19:19:51.16:642,51,0	1/1:1,24:25:69.22:868,69,0	1/1:2,22:24:66.21:830,66,0	1/1:1,11:12:27.09:336,27,0	1/1:0,2:2:6.02:75,6,0	1/1:1,17:18:51.16:641,51,0	1/1:0,27:27:72.19:888,72,0	1/1:2,27:29:78.25:981,78,0	1/1:1,15:16:39.12:491,39,0	1/1:0,24:24:72.23:905,72,0	1/1:2,13:15:33.11:415,33,0	1/1:3,18:21:51.16:640,51,0	1/1:1,39:40:99:1454,117,0	1/1:2,29:30:81.26:1019,81,0	1/1:1,8:9:21.07:264,21,0
chr10	23318207	.	A	AAACTAC	2230.76	PASS	AB=0.984;AC=22;AF=0.393;AN=56;BaseQRankSum=7.951;DP=550;FS=4.593;HRun=0;HaplotypeScore=168.8626;InbreedingCoeff=-0.6348;MQ=56.44;MQ0=6;MQRankSum=-6.391;QD=5.09;ReadPosRankSum=-5.140;VQSLOD=0.9508;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:19,0:19:93.76:97,0,94	0/1:6,0:6:23.39:23,0,45	0/0:32,0:25:50.38:0,50,627	0/0:15,0:13:32.87:0,33,343	0/1:26,0:26:94.71:95,0,288	0/1:24,0:24:99:121,0,231	0/0:17,0:16:20.01:0,20,128	0/0:30,0:28:38.73:0,39,490	0/1:16,0:16:99:138,0,144	0/1:23,0:23:99:219,0,259	0/1:22,0:22:91.77:92,0,110	0/1:20,0:20:99:146,0,169	0/1:18,0:18:99:192,0,122	0/1:24,0:24:25.70:26,0,254	0/1:28,0:28:91.76:92,0,145	0/1:23,0:23:99:123,0,125	0/1:13,0:13:36.20:36,0,99	0/0:2,0:2:5.97:0,6,46	0/1:14,0:13:99:405,0,152	0/1:29,0:29:99:170,0,259	0/1:7,8:15:79.73:128,0,80	0/1:13,0:13:38.21:38,0,57	0/0:16,0:16:24.19:0,24,155	0/1:16,0:16:69.41:69,0,79	0/1:27,0:27:59.20:59,0,186	0/1:29,0:29:80.65:81,0,215	0/1:27,0:27:36.07:36,0,137	0/1:6,0:6:0.65:1,0,105
chr10	23318208	.	A	AACTACTACT	8318.03	PASS	AB=1.000;AC=51;AF=0.944;AN=54;BaseQRankSum=-1.555;DP=570;FS=0.000;HRun=0;HaplotypeScore=187.7992;InbreedingCoeff=0.4821;MQ=55.51;MQ0=6;MQRankSum=-2.575;QD=15.18;ReadPosRankSum=-2.515;VQSLOD=3.5809;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:21:11.77:120,12,0	1/1:6,0:6:12.04:235,12,0	0/1:31,0:24:0.04:0,0,0	./.	1/1:26,0:26:1.99:304,2,0	1/1:24,0:24:35.97:590,36,0	1/1:17,0:16:17.72:182,18,0	1/1:31,0:28:14.97:150,15,0	1/1:16,0:16:30:484,30,0	1/1:22,0:22:41.56:851,42,0	1/1:22,0:22:14.88:211,15,0	1/1:20,0:20:36.08:575,36,0	1/1:18,0:18:32.96:471,33,0	1/1:24,0:24:38.93:529,39,0	1/1:11,17:33:12.04:419,12,0	1/1:9,16:30:9.03:373,9,0	1/1:15,0:15:10.81:120,11,0	1/1:3,0:3:3:27,3,0	1/1:8,0:14:21.07:372,21,0	1/1:14,0:28:8.66:140,9,0	1/1:14,0:15:11.01:130,11,0	1/1:13,0:13:21.03:350,21,0	1/1:16,0:16:21:240,21,0	1/1:16,0:16:21:222,21,0	1/1:27,0:27:51.12:733,51,0	1/1:22,0:30:26.66:361,27,0	1/1:22,0:29:8.19:125,8,0	0/0:4,0:6:5.97:0,6,88
chr10	23318313	.	AACCACCACC	A	3837.53	PASS	AB=0.972;AC=31;AF=0.620;AN=50;BaseQRankSum=0.671;DP=503;FS=3.277;HRun=0;HaplotypeScore=135.6267;InbreedingCoeff=0.6135;MQ=53.59;MQ0=27;MQRankSum=1.020;QD=12.50;ReadPosRankSum=2.517;VQSLOD=2.7480;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:18:17.88:0,18,202	1/1:1,0:1:3.01:76,3,0	0/1:40,0:17:0:0,0,0	0/0:53,0:14:15.02:0,15,148	1/1:15,0:14:3.01:39,3,0	./.	1/1:15,0:14:15.04:302,15,0	1/1:15,5:19:13.51:252,14,0	1/1:9,0:9:5.89:85,6,0	1/1:16,0:12:12.36:380,12,0	1/1:14,0:13:3.01:56,3,0	0/0:20,0:20:0.47:0,0,1	1/1:21,0:21:4.44:134,4,0	1/1:13,0:13:5.91:72,6,0	1/1:26,7:33:42.11:840,42,0	1/1:18,6:25:26.96:602,27,0	0/0:9,0:9:11.98:0,12,166	0/0:6,0:6:9.03:0,9,304	0/0:7,0:6:9.01:0,9,155	0/0:11,0:11:17.93:0,18,387	0/0:20,0:19:24.08:0,24,556	0/1:11,0:11:0:1,0,0	./.	1/1:8,0:9:6.02:148,6,0	./.	1/1:18,0:18:18.94:389,19,0	0/1:30,0:33:17.77:203,0,18	1/1:11,0:12:4.61:259,5,0
chr10	23318337	.	CACCACCACCACT	C	4372.60	PASS	AB=0.892;AC=32;AF=0.571;AN=56;BaseQRankSum=-0.151;DP=490;FS=5.298;HRun=0;HaplotypeScore=141.2414;InbreedingCoeff=0.2575;MQ=51.12;MQ0=30;MQRankSum=3.553;QD=11.98;ReadPosRankSum=2.905;VQSLOD=3.5576;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:19:38.91:0,39,512	1/1:3,0:2:6.01:101,6,0	0/0:16,0:2:0:0,0,0	0/0:30,0:5:15.02:0,15,148	0/1:4,16:19:7.20:95,0,7	1/1:2,24:23:5.93:40,6,0	1/1:19,0:18:33.06:585,33,0	0/1:22,0:14:38.01:231,0,38	1/1:3,7:10:5.05:166,5,0	1/1:5,15:15:38.14:660,38,0	1/1:3,20:20:20.51:194,21,0	1/1:0,20:20:2.09:18,2,0	1/1:2,15:17:4.44:214,4,0	1/1:1,14:14:6.02:153,6,0	0/1:32,0:32:99:448,0,274	0/1:19,0:18:49.35:256,0,49	0/0:7,0:7:17.99:0,18,254	0/0:8,0:7:21.02:0,21,476	0/0:8,0:6:15.01:0,15,266	0/0:11,0:11:30.92:0,31,619	0/0:23,0:20:38.59:0,39,760	0/1:4,11:14:7.01:13,0,7	1/1:0,15:15:3.44:21,3,0	1/1:8,0:8:20.98:402,21,0	1/1:4,16:18:1.91:18,2,0	0/1:18,0:15:99:335,0,252	0/1:29,0:29:99:176,0,432	0/1:14,0:13:99:246,0,110
chr10	23319574	.	A	AATCACACCC	3426.26	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-4.141;DP=436;FS=1.602;HRun=0;HaplotypeScore=113.3434;InbreedingCoeff=0.9037;MQ=80.23;MQ0=0;MQRankSum=-6.745;QD=59.07;ReadPosRankSum=-1.341;VQSLOD=3.4807;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:21.03:0,21,506	0/0:7,0:7:18.06:0,18,522	0/0:10,0:10:12.04:0,12,290	0/0:14,0:14:24.02:0,24,420	0/0:21,0:21:60.19:0,60,1647	0/0:17,0:17:45.15:0,45,1304	0/0:8,0:8:18.06:0,18,463	0/0:37,0:37:78.25:0,78,1995	0/0:23,0:23:66.23:0,66,1896	0/0:21,0:21:54.18:0,54,1489	0/0:16,0:16:36.12:0,36,1044	0/0:13,0:13:39.13:0,39,1088	0/0:21,0:21:57.20:0,57,1560	0/0:11,0:11:30.10:0,30,870	0/0:22,0:22:60.21:0,60,1730	0/0:29,0:29:69.23:0,69,1840	1/1:4,2:6:6.02:281,6,0	1/1:0,2:2:6.02:281,6,0	1/1:16,5:23:42.14:1613,42,0	1/1:8,8:19:21.07:970,21,0	1/1:7,1:8:6.02:281,6,0	0/0:7,0:7:18.06:0,18,522	0/0:9,0:9:24.08:0,24,657	0/0:14,0:14:36.11:0,36,948	0/0:13,0:13:27.09:0,27,783	0/0:22,0:22:60.20:0,60,1679	0/0:28,0:28:84.29:0,84,2336	0/0:5,0:5:15.05:0,15,435
chr10	23320161	.	CT	C	1973.04	PASS	AB=0.800;AC=9;AF=0.161;AN=56;BaseQRankSum=9.168;DP=526;FS=3.867;HRun=10;HaplotypeScore=56.3236;InbreedingCoeff=0.8278;MQ=84.67;MQ0=0;MQRankSum=-0.334;QD=18.79;ReadPosRankSum=-0.147;VQSLOD=4.3732;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:30.05:0,30,319	0/1:3,1:4:14.02:14,0,88	0/0:20,0:20:34.80:0,35,289	0/0:17,1:17:3.34:0,3,201	0/0:20,0:20:57.12:0,57,611	0/0:18,0:18:48.09:0,48,511	0/0:15,0:15:33.09:0,33,365	1/1:6,29:35:86.92:744,87,0	0/0:15,0:17:44.79:0,45,460	0/0:24,0:24:69.17:0,69,744	0/0:18,0:18:45.09:0,45,485	0/0:26,0:26:66.13:0,66,703	0/0:19,0:19:51.12:0,51,554	0/0:20,0:20:51.02:0,51,540	0/0:31,2:33:33:0,33,805	0/0:28,0:28:75.17:0,75,817	0/0:15,0:15:39.07:0,39,412	0/0:8,0:9:20.75:0,21,192	0/0:16,1:17:22.07:0,22,472	0/0:18,0:18:51.14:0,51,564	0/0:15,0:15:42.11:0,42,465	0/0:22,1:23:43.13:0,43,690	0/0:9,0:9:27.07:0,27,299	0/0:10,0:10:27.03:0,27,272	0/0:17,1:18:28.08:0,28,529	1/1:4,18:22:35.59:467,36,0	1/1:2,33:35:89.73:781,90,0	1/1:4,5:9:14.99:130,15,0
chr10	23321346	.	GA	G	2517.17	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=9.561;DP=588;FS=2.983;HRun=8;HaplotypeScore=59.8399;InbreedingCoeff=0.9786;MQ=70.28;MQ0=0;MQRankSum=-0.429;QD=21.51;ReadPosRankSum=-0.718;VQSLOD=3.7429;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,19:22:19.76:507,20,0	0/0:5,0:5:15.05:0,15,181	0/0:19,0:19:36.10:0,36,415	0/0:13,1:15:8.65:0,9,351	0/0:23,0:23:60.18:0,60,723	0/0:21,0:21:63.18:0,63,749	0/0:7,0:7:21.05:0,21,243	1/1:11,20:31:60.07:574,60,0	0/0:15,0:15:42.13:0,42,507	0/0:29,0:29:84.25:0,84,1008	0/0:19,0:20:60.04:0,60,692	0/0:27,1:28:49.26:0,49,877	0/0:19,0:19:54.13:0,54,627	0/0:25,0:25:69.20:0,69,822	0/0:19,0:19:57.17:0,57,688	0/0:19,0:19:51.11:0,51,600	0/0:22,0:22:57.17:0,57,688	0/0:29,0:29:70.10:0,70,834	0/0:25,0:25:63.19:0,63,758	0/0:24,1:26:44.49:0,44,803	0/0:33,0:33:96.28:0,96,1147	0/0:17,0:17:48.13:0,48,568	0/0:23,0:23:63.18:0,63,749	0/0:14,0:14:30.09:0,30,362	0/0:18,0:18:48.15:0,48,580	1/1:5,30:35:56.89:828,57,0	1/1:1,21:22:60.09:579,60,0	1/1:0,7:7:21.03:203,21,0
chr10	23321719	.	AAC	A	2009.25	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-3.939;DP=592;FS=5.333;HRun=0;HaplotypeScore=146.8865;InbreedingCoeff=0.9730;MQ=69.85;MQ0=0;MQRankSum=-1.177;QD=26.44;ReadPosRankSum=-1.320;VQSLOD=4.4296;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:45.20:0,45,280	0/0:8,0:8:22.73:0,23,110	0/0:28,0:24:56.23:0,56,635	0/0:20,0:18:15.46:0,15,395	0/0:27,0:27:63.58:0,64,374	0/0:24,0:24:68.66:0,69,364	0/0:13,0:12:20.75:0,21,149	0/0:26,0:26:63.79:0,64,349	0/0:18,0:18:48.36:0,48,261	0/0:34,0:34:92.68:0,93,611	0/0:23,0:23:62.74:0,63,345	0/0:26,0:26:70.78:0,71,349	0/0:22,0:22:60.02:0,60,319	0/0:29,0:29:82.27:0,82,430	0/0:17,0:17:48.10:0,48,700	0/0:31,0:31:90.23:0,90,1328	1/1:3,7:10:11.71:142,12,0	1/1:0,13:13:24.08:366,24,0	1/1:7,9:16:45.10:570,45,0	1/1:6,17:23:36.98:625,37,0	1/1:1,13:14:36.03:478,36,0	0/0:16,0:16:41.49:0,41,218	0/0:17,0:17:42.37:0,42,202	0/0:25,0:25:66.06:0,66,360	0/0:17,0:17:35.62:0,36,241	0/0:21,0:21:59.93:0,60,327	0/0:33,0:33:82.85:0,83,451	0/0:17,0:17:8.92:0,9,190
chr10	23321720	.	AC	A	1756.75	PASS	AB=1.000;AC=31;AF=0.554;AN=56;BaseQRankSum=10.871;DP=591;FS=0.000;HRun=1;HaplotypeScore=135.1486;InbreedingCoeff=-0.0684;MQ=69.22;MQ0=0;MQRankSum=-3.176;QD=3.64;ReadPosRankSum=8.358;VQSLOD=-0.3601;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:23:16.66:17,0,57	1/1:8,0:8:5.01:12,5,0	0/0:26,0:23:48.28:0,48,523	0/0:18,1:18:6.60:0,7,272	0/1:27,0:27:44.56:89,0,45	0/1:25,0:25:16.82:17,0,62	0/0:13,0:12:0.76:0,1,72	0/1:25,0:25:2.67:3,0,48	0/1:17,0:17:10.94:11,0,51	0/1:36,0:36:9.03:9,0,208	0/1:23,0:23:6.26:6,0,86	1/1:26,0:26:0.72:31,1,0	0/1:22,0:22:26.21:26,0,45	0/1:30,0:30:52.51:67,0,53	0/0:17,0:17:48.07:0,48,568	0/0:31,0:31:89.45:0,89,1036	1/1:8,0:8:11.98:110,12,0	1/1:14,0:14:23.94:191,24,0	1/1:17,0:17:49.15:393,49,0	1/1:18,4:22:51.26:494,51,0	1/1:14,0:14:35.37:263,35,0	0/1:15,0:16:45.82:57,0,46	1/1:17,0:17:17.46:52,17,0	0/1:25,0:25:6.45:6,0,82	0/1:17,0:17:4.09:4,0,79	0/1:22,0:22:6.21:6,0,71	0/1:32,0:32:29.01:29,0,56	0/1:17,0:17:12.69:33,0,13
chr10	23321721	.	CA	C	8786.03	PASS	AB=0.851;AC=45;AF=0.804;AN=56;BaseQRankSum=3.688;DP=587;FS=16.861;HRun=10;HaplotypeScore=112.6520;InbreedingCoeff=0.6246;MQ=69.14;MQ0=0;MQRankSum=-3.094;QD=17.75;ReadPosRankSum=3.790;VQSLOD=4.0749;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,17:23:38:381,38,0	1/1:0,8:8:24:208,24,0	0/0:24,1:21:3.97:0,4,260	0/0:20,0:18:30.02:0,30,310	1/1:3,24:27:38.79:564,39,0	1/1:3,21:24:59.99:521,60,0	1/1:3,8:12:20.03:162,20,0	1/1:2,23:25:68.94:588,69,0	1/1:3,14:17:41.99:365,42,0	0/1:7,29:36:9.59:613,0,10	1/1:5,19:24:50.96:442,51,0	1/1:2,25:27:71.98:625,72,0	1/1:3,19:22:53.97:468,54,0	1/1:4,26:30:74.98:651,75,0	0/0:17,0:17:42.10:0,42,457	0/0:30,0:30:77.93:0,78,820	1/1:8,0:8:6.96:31,7,0	1/1:14,0:14:12.43:33,12,0	0/1:18,0:18:2.92:22,0,3	0/1:23,0:23:39.72:62,0,40	1/1:13,0:14:7.10:27,7,0	1/1:5,11:16:34.13:296,34,0	1/1:0,17:17:44.99:391,45,0	1/1:4,20:24:53.98:469,54,0	1/1:2,13:15:38.99:338,39,0	1/1:3,19:22:56.96:490,57,0	1/1:3,28:31:74.97:651,75,0	1/1:2,15:17:44.98:389,45,0
chr10	23322189	.	AT	A	1061.89	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=4.823;DP=567;FS=0.682;HRun=3;HaplotypeScore=59.0882;InbreedingCoeff=0.9989;MQ=73.15;MQ0=0;MQRankSum=-0.608;QD=24.13;ReadPosRankSum=2.366;VQSLOD=3.0304;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:63.01:0,63,768	0/0:11,0:11:30.10:0,30,414	0/0:18,0:18:53.60:0,54,598	0/0:14,0:15:35.26:0,35,407	0/0:24,0:24:66:0,66,862	0/0:30,0:30:90.29:0,90,1227	0/0:27,0:27:81.27:0,81,1120	0/0:28,0:28:84.25:0,84,1106	0/0:14,0:14:42.14:0,42,580	0/0:25,0:25:75.23:0,75,995	0/0:24,0:24:72.22:0,72,961	0/0:11,0:11:33.11:0,33,456	0/0:15,0:15:42.10:0,42,543	0/0:17,0:17:51.13:0,51,657	1/1:0,21:21:45.14:555,45,0	1/1:1,22:23:51.16:629,51,0	0/0:12,0:12:30.10:0,30,414	0/0:18,0:18:47.83:0,48,629	0/0:19,0:19:54.16:0,54,703	0/0:28,0:28:81.27:0,81,1113	0/0:18,0:18:54.17:0,54,730	0/0:22,0:22:63.18:0,63,837	0/0:30,0:30:90.25:0,90,1180	0/0:14,0:14:42.14:0,42,581	0/0:21,0:21:63.20:0,63,854	0/0:22,0:22:66.11:0,66,873	0/0:28,0:28:81.11:0,81,1019	0/0:10,0:10:30.10:0,30,414
chr10	23323620	.	CAGT	C	723.63	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.098;DP=605;FS=1.985;HRun=0;HaplotypeScore=96.7762;InbreedingCoeff=0.9629;MQ=70.95;MQ0=0;MQRankSum=-4.466;QD=36.18;ReadPosRankSum=-1.017;VQSLOD=4.2035;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,20:20:51.13:818,51,0	0/0:8,0:8:24.08:0,24,544	0/0:21,0:21:44.89:0,45,1230	0/0:7,0:7:12.01:0,12,272	0/0:35,0:35:96.33:0,96,2142	0/0:34,0:34:99:0,99,2182	0/0:14,0:14:36.12:0,36,797	0/0:35,0:35:99:0,102,2236	0/0:17,0:17:51.18:0,51,1153	0/0:29,0:29:84.28:0,84,1848	0/0:23,0:23:66.23:0,66,1482	0/0:17,0:17:51.16:0,51,1086	0/0:18,0:18:54.19:0,54,1223	0/0:29,0:29:81.28:0,81,1802	0/0:28,0:28:84.29:0,84,1900	0/0:20,0:20:57.20:0,57,1274	0/0:11,0:11:30.08:0,30,603	0/0:24,0:24:70.48:0,70,1557	0/0:15,0:15:45.15:0,45,1020	0/0:31,0:31:93.28:0,93,2004	0/0:8,0:8:24.08:0,24,544	0/0:32,0:32:96.33:0,96,2139	0/0:24,0:24:72.25:0,72,1630	0/0:9,0:9:24.07:0,24,500	0/0:25,0:25:75.26:0,75,1685	0/0:24,0:24:72.25:0,72,1617	0/0:38,0:38:99:0,114,2539	0/0:9,0:9:27.09:0,27,611
chr10	23324299	.	TGGG	T	7300.91	PASS	AB=0.541;AC=25;AF=0.446;AN=56;BaseQRankSum=-15.077;DP=524;FS=9.403;HRun=12;HaplotypeScore=100.7145;InbreedingCoeff=0.8401;MQ=66.40;MQ0=5;MQRankSum=-4.383;QD=26.55;ReadPosRankSum=4.282;VQSLOD=3.3803;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,29:36:78.20:986,78,0	0/0:3,0:7:3.70:0,4,8	0/0:17,0:14:33.05:0,33,497	0/0:24,0:18:44.92:0,45,590	0/0:7,0:15:9.61:0,10,22	0/0:5,0:19:17.44:0,17,38	0/1:3,3:20:12.58:86,0,13	1/1:5,12:16:33.03:401,33,0	0/0:2,0:9:7.48:0,7,16	0/0:7,0:14:7.75:0,8,31	0/0:4,0:10:8.72:0,9,19	0/0:10,0:27:14.95:0,15,32	0/0:3,0:16:16.20:0,16,35	0/0:4,0:19:14.59:0,15,32	1/1:3,12:15:36.10:455,36,0	1/1:4,19:23:57.15:720,57,0	1/1:7,17:25:48.10:639,48,0	1/1:1,19:21:60.13:739,60,0	1/1:5,10:12:24.05:293,24,0	1/1:6,21:27:63.16:790,63,0	1/1:6,17:23:45.09:569,45,0	0/0:4,0:13:9.97:0,10,22	0/0:5,0:21:14.59:0,15,32	0/0:8,0:16:8.36:0,8,18	0/0:3,0:19:11.21:0,11,25	1/1:3,23:27:69.20:872,69,0	1/1:5,15:20:48.14:603,48,0	1/1:1,4:6:10.61:149,11,0
chr10	23325028	.	GA	G	536.88	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.969;DP=398;FS=0.000;HRun=9;HaplotypeScore=65.2886;InbreedingCoeff=0.8004;MQ=76.90;MQ0=0;MQRankSum=-0.424;QD=19.17;ReadPosRankSum=0.446;VQSLOD=3.8628;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,25:28:69.03:632,69,0	0/0:5,0:5:15.04:0,15,173	0/0:12,0:12:17.18:0,17,217	0/0:19,0:16:28.63:0,29,309	0/0:17,0:17:45.12:0,45,509	0/0:6,0:6:15.04:0,15,165	0/0:14,0:14:30.07:0,30,335	0/0:30,0:30:69.12:0,69,779	0/0:7,0:7:18.04:0,18,198	0/0:17,0:17:36.11:0,36,416	0/0:7,0:7:21.06:0,21,242	0/0:6,0:6:18.04:0,18,198	0/0:15,0:15:27.08:0,27,311	0/0:14,0:14:32.85:0,33,380	0/0:12,0:12:33.04:0,33,357	0/0:13,0:13:39.12:0,39,449	0/0:15,0:15:44.86:0,45,480	0/0:19,0:19:49.21:0,49,531	0/0:20,0:21:60:0,60,662	0/0:8,0:8:21.06:0,21,242	0/0:14,0:14:36.11:0,36,415	0/0:10,0:10:27.08:0,27,312	0/0:11,0:11:24.07:0,24,277	0/0:1,0:1:3.01:0,3,35	0/0:31,0:31:81.24:0,81,934	0/0:15,0:15:42.12:0,42,484	0/0:18,0:18:48.14:0,48,553	0/0:12,0:12:36.08:0,36,395
chr10	23325919	.	AAAAACAAAAC	A	13125.85	PASS	AB=1.000;AC=40;AF=0.714;AN=56;BaseQRankSum=-4.278;DP=510;FS=0.552;HRun=0;HaplotypeScore=167.4612;InbreedingCoeff=0.8371;MQ=61.78;MQ0=7;MQRankSum=-2.946;QD=35.77;ReadPosRankSum=1.799;VQSLOD=4.3990;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:36.12:0,36,1537	1/1:3,4:7:18.06:505,18,0	0/1:22,0:13:3.75:4,0,52	0/0:38,0:14:8.94:0,9,133	1/1:16,8:24:35.58:865,36,0	1/1:12,9:21:36.12:1038,36,0	1/1:1,5:6:9.03:269,9,0	1/1:22,0:21:23.92:410,24,0	1/1:7,6:13:27.09:688,27,0	1/1:24,6:30:36.12:918,36,0	1/1:19,7:26:45.14:1136,45,0	1/1:6,8:13:15.05:432,15,0	1/1:7,7:14:12.04:343,12,0	1/1:8,11:19:36.12:1036,36,0	1/1:23,0:23:39.07:732,39,0	1/1:19,0:19:33.11:777,33,0	0/0:14,0:15:30.07:0,30,508	0/0:16,0:17:27.09:0,27,620	0/0:15,0:16:33.11:0,33,737	0/0:19,0:21:48.16:0,48,1128	0/0:12,0:12:18.06:0,18,261	1/1:10,11:21:21.07:589,21,0	1/1:10,6:16:27.09:701,27,0	0/1:6,0:6:1.80:143,0,2	1/1:8,6:14:24.08:652,24,0	1/1:17,7:24:36.12:885,36,0	1/1:13,8:21:30.10:824,30,0	1/1:1,4:5:6.02:178,6,0
chr10	23325944	.	C	CA	2150.48	PASS	AB=0.921;AC=21;AF=0.375;AN=56;BaseQRankSum=1.278;DP=512;FS=8.379;HRun=4;HaplotypeScore=125.1381;InbreedingCoeff=-0.5347;MQ=47.91;MQ0=19;MQRankSum=-2.259;QD=6.02;ReadPosRankSum=2.082;VQSLOD=-0.0889;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:16:42.12:0,42,476	0/1:7,2:8:46.80:47,0,49	0/1:34,0:9:2.30:2,0,115	0/0:59,0:10:0.31:0,0,132	0/1:18,2:19:99:114,0,155	0/1:14,2:16:83.62:84,0,101	0/0:8,0:8:16.25:0,16,117	0/1:15,8:22:99:229,0,284	0/1:16,1:16:99:123,0,192	0/1:13,4:17:99:143,0,113	0/1:20,5:25:99:253,0,207	0/1:12,0:11:17.50:17,0,52	0/1:11,0:11:13.85:14,0,107	0/1:13,1:14:63.95:78,0,64	0/1:16,2:18:49.97:328,0,50	0/1:16,2:18:99:235,0,153	0/0:15,0:15:23.27:0,23,262	0/1:18,0:17:0.94:1,0,199	0/0:21,0:20:35.58:0,36,416	0/0:22,0:22:28.03:0,28,422	0/0:13,0:13:29.99:0,30,290	0/1:17,0:17:43.02:43,0,169	0/1:17,2:19:70.27:70,0,266	0/1:8,0:8:65.06:65,0,91	0/1:12,1:13:51.15:51,0,100	0/1:24,2:26:99:208,0,272	0/1:15,2:17:99:168,0,111	0/1:5,0:5:0.72:31,0,1
chr10	23325945	.	AAAAC	A	4356.51	PASS	AB=0.970;AC=20;AF=0.357;AN=56;BaseQRankSum=9.143;DP=515;FS=10.434;HRun=0;HaplotypeScore=142.8470;InbreedingCoeff=-0.5521;MQ=47.92;MQ0=18;MQRankSum=-6.656;QD=13.87;ReadPosRankSum=8.585;VQSLOD=2.5223;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:16:42.14:0,42,1053	0/1:9,0:8:12.65:113,0,13	0/0:34,0:9:18.18:0,18,134	0/0:60,0:11:12.37:0,12,177	0/1:20,0:19:99:243,0,118	0/1:15,0:15:26.04:294,0,26	0/1:8,0:8:59.15:59,0,84	0/1:23,0:22:99:220,0,379	0/1:17,0:16:99:239,0,158	0/1:18,0:18:99:226,0,113	0/1:24,0:24:99:386,0,172	0/1:12,0:12:46.98:93,0,47	0/1:11,0:11:66.63:67,0,82	0/1:14,0:14:23.67:266,0,24	0/1:12,5:18:73.50:469,0,73	0/1:10,8:18:99:469,0,138	0/0:15,0:15:36.09:0,36,588	0/0:18,0:17:19.99:0,20,591	0/0:22,0:21:60.04:0,60,943	0/0:22,0:22:66.22:0,66,1278	0/0:13,0:13:33.10:0,33,534	0/1:17,0:17:99:160,0,159	0/1:21,0:21:99:209,0,333	0/1:8,0:8:57.65:58,0,125	0/1:13,0:13:99:174,0,129	0/1:25,0:25:99:306,0,243	0/1:17,0:17:93.50:261,0,94	0/1:5,0:5:23.69:46,0,24
chr10	23325960	.	C	CA	652.30	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=3.932;DP=531;FS=7.056;HRun=9;HaplotypeScore=134.4024;InbreedingCoeff=0.4199;MQ=41.27;MQ0=23;MQRankSum=-2.335;QD=5.44;ReadPosRankSum=-0.126;VQSLOD=0.7386;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:22.55:0,23,60	0/0:9,0:8:17.99:0,18,155	0/0:35,0:6:5.15:0,5,50	0/1:69,0:12:5.55:6,0,79	0/0:22,0:20:47.78:0,48,413	0/0:15,0:15:35.97:0,36,309	0/0:11,0:11:26.99:0,27,233	0/0:25,0:24:53.20:0,53,229	0/0:15,0:14:39.10:0,39,319	0/0:16,0:16:38.99:0,39,337	0/0:24,0:24:22.74:0,23,401	0/0:10,0:10:17.99:0,18,154	0/0:12,0:12:24:0,24,207	0/0:16,0:16:11.24:0,11,269	1/1:10,4:15:35.79:321,36,0	1/1:9,8:17:47.77:442,48,0	0/1:10,0:11:2.73:3,0,23	0/0:18,0:18:4.25:0,4,41	0/0:27,0:26:7.14:0,7,76	0/0:21,0:21:6.18:0,6,32	0/0:11,0:11:7.91:0,8,25	0/0:19,0:19:42.69:0,43,360	0/0:21,0:21:59.97:0,60,515	0/1:8,0:8:12.05:12,0,135	0/0:16,0:16:44.97:0,45,385	0/0:30,0:29:32.21:0,32,262	0/0:15,0:15:38.14:0,38,205	0/0:4,0:4:0.40:0,0,28
chr10	23325966	.	AAAAC	A	577.68	PASS	AB=0.912;AC=7;AF=0.125;AN=56;BaseQRankSum=7.467;DP=545;FS=2.415;HRun=0;HaplotypeScore=155.3713;InbreedingCoeff=-0.1453;MQ=42.92;MQ0=25;MQRankSum=-3.581;QD=4.48;ReadPosRankSum=-3.227;VQSLOD=1.9401;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:40.79:0,41,333	0/0:8,0:7:18.05:0,18,270	0/0:46,0:9:14.12:0,14,225	0/0:77,0:12:20.19:0,20,351	0/0:21,0:19:41.84:0,42,957	0/0:14,0:14:7.54:0,8,484	0/0:13,0:13:32.93:0,33,629	0/0:25,0:24:63.18:0,63,905	0/0:16,0:15:29.51:0,30,808	0/0:15,0:15:44.82:0,45,745	0/1:22,0:22:9.61:10,0,1051	0/0:9,0:9:18.02:0,18,283	0/0:13,0:13:26.36:0,26,506	0/0:16,0:16:15.16:0,15,504	0/1:7,5:12:21.54:171,0,22	0/1:9,8:17:28.91:238,0,29	0/0:11,0:11:16.13:0,16,141	0/0:18,0:18:27.16:0,27,238	0/1:27,0:25:32.67:33,0,255	0/0:21,0:21:32.33:0,32,350	0/0:12,0:12:21.65:0,22,129	0/0:19,0:19:30.85:0,31,849	0/0:21,0:21:49.33:0,49,1290	0/0:7,0:7:21.07:0,21,534	0/0:16,0:16:22.21:0,22,814	0/1:30,0:29:84.18:84,0,658	0/1:17,0:17:99:128,0,214	0/1:4,0:4:43.89:44,0,45
chr10	23325969	.	AC	A	3042.09	PASS	AB=0.980;AC=19;AF=0.339;AN=56;BaseQRankSum=1.092;DP=557;FS=12.343;HRun=2;HaplotypeScore=122.6311;InbreedingCoeff=0.7738;MQ=43.15;MQ0=24;MQRankSum=-0.805;QD=16.62;ReadPosRankSum=-1.914;VQSLOD=2.2920;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,17:17:42.14:537,42,0	0/0:8,0:7:18.04:0,18,244	0/0:52,0:10:14.39:0,14,114	0/0:78,2:13:8.27:0,8,157	0/0:22,0:20:49.92:0,50,650	0/0:13,0:13:39.06:0,39,503	0/0:13,0:13:33.09:0,33,419	0/0:24,0:25:5.96:0,6,89	0/0:18,0:17:42.23:0,42,521	0/0:15,0:15:45.07:0,45,570	0/0:24,0:24:59.45:0,59,775	0/0:9,0:9:18.05:0,18,231	0/0:13,0:13:24.08:0,24,324	0/0:16,0:17:40.36:0,40,481	1/1:12,0:12:33.30:186,33,0	1/1:17,0:17:47.08:279,47,0	1/1:4,5:12:20.78:225,21,0	1/1:3,12:17:30.77:380,31,0	1/1:4,19:24:53.97:554,54,0	1/1:5,13:22:62.49:717,62,0	1/1:1,5:8:17.94:190,18,0	0/0:18,0:18:42.86:0,43,548	0/0:21,0:21:59.98:0,60,781	0/0:7,0:7:21.05:0,21,272	0/0:17,0:17:44.96:0,45,565	0/1:29,2:30:99:167,0,100	0/1:18,0:18:9.46:9,0,62	0/1:3,0:3:0.08:0,0,13
chr10	23326040	.	A	AAACAACAAC	13044.98	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-8.770;DP=523;FS=3.617;HRun=0;HaplotypeScore=140.6657;InbreedingCoeff=0.8616;MQ=55.97;MQ0=6;MQRankSum=-6.642;QD=36.44;ReadPosRankSum=0.906;VQSLOD=4.5785;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:10,0:17:33:535,33,0	1/1:2,14:16:24:905,24,0	0/0:42,0:25:33.07:0,33,585	0/0:30,0:20:23.60:0,24,345	1/1:14,16:31:44.98:1410,45,0	1/1:3,5:10:9.03:312,9,0	1/1:5,0:6:5.58:176,6,0	0/0:13,0:32:8.97:0,9,330	1/1:6,5:12:12.04:401,12,0	1/1:9,17:29:57.16:2038,57,0	1/1:12,9:22:17.89:432,18,0	1/1:6,0:6:12.04:241,12,0	1/1:4,16:22:27.09:1163,27,0	1/1:4,15:19:18.06:825,18,0	1/1:4,0:20:36.12:691,36,0	1/1:4,0:23:39.13:729,39,0	1/1:4,0:10:9.03:152,9,0	1/1:8,0:8:9.03:146,9,0	1/1:17,0:16:22.39:266,22,0	1/1:4,0:18:29.83:455,30,0	1/1:6,0:6:6.01:85,6,0	1/1:4,2:6:12.04:365,12,0	1/1:8,7:17:12.04:365,12,0	1/1:4,6:16:9.03:413,9,0	1/1:10,13:25:24.08:940,24,0	0/0:6,0:29:43.94:0,44,1136	0/0:6,0:25:30.19:0,30,816	0/0:1,0:4:9.03:0,9,189
chr10	23326350	.	TA	T	3700.13	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=9.533;DP=736;FS=7.808;HRun=3;HaplotypeScore=75.5663;InbreedingCoeff=0.9985;MQ=67.30;MQ0=1;MQRankSum=-1.005;QD=35.24;ReadPosRankSum=-1.124;VQSLOD=3.5757;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:30:87.04:0,87,1198	0/0:11,0:11:33.11:0,33,475	0/0:36,0:36:70.55:0,71,1350	0/0:31,0:31:90.30:0,90,1276	0/0:35,0:35:99:0,102,1467	0/0:30,0:30:90.30:0,90,1296	0/0:28,0:28:81.27:0,81,1167	1/1:0,27:27:81.24:992,81,0	0/0:33,0:33:96.32:0,96,1380	0/0:29,0:29:87.26:0,87,1231	0/0:23,0:23:66.22:0,66,934	0/0:23,0:23:69.23:0,69,994	0/0:28,0:28:84.28:0,84,1210	0/0:23,0:23:63.21:0,63,907	0/0:27,0:27:78.25:0,78,1106	0/0:38,0:37:99:0,114,1622	0/0:22,0:22:57.19:0,57,820	0/0:26,0:26:65.82:0,66,919	0/0:25,0:25:69.19:0,69,970	0/0:21,0:21:60.16:0,60,841	0/0:30,0:29:87.27:0,87,1217	0/0:11,0:11:27.09:0,27,389	0/0:23,0:23:69.19:0,69,970	0/0:26,0:27:78.73:0,79,1123	0/0:21,0:21:60.18:0,60,844	1/1:3,31:34:53.09:1109,53,0	1/1:1,36:37:99:1339,108,0	1/1:0,7:7:21.07:260,21,0
chr10	23327375	.	G	GA	14616.12	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-4.863;DP=508;FS=10.182;HRun=6;HaplotypeScore=40.0376;InbreedingCoeff=0.9501;MQ=60.89;MQ0=7;MQRankSum=-3.983;QD=29.65;ReadPosRankSum=3.425;VQSLOD=4.7300;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,35:38:90.29:1130,90,0	1/1:2,6:8:18.06:226,18,0	0/0:6,0:3:9.02:0,9,90	0/0:9,0:7:17.95:0,18,159	1/1:4,22:26:63.16:772,63,0	1/1:5,10:14:24.08:302,24,0	1/1:2,15:17:36.12:452,36,0	1/1:5,21:25:63.20:792,63,0	1/1:2,10:12:27.09:336,27,0	1/1:2,13:14:42.13:523,42,0	1/1:5,14:19:42.07:506,42,0	1/1:1,13:14:33.10:415,33,0	1/1:3,22:25:60.19:755,60,0	1/1:4,19:23:51.16:642,51,0	1/1:0,15:15:39.12:490,39,0	1/1:0,14:14:33.11:415,33,0	1/1:1,21:21:57.18:717,57,0	1/1:4,11:14:27.07:326,27,0	1/1:4,5:9:15.05:189,15,0	1/1:2,22:24:63.20:788,63,0	1/1:0,23:23:51.16:642,51,0	1/1:4,18:20:45.10:548,45,0	1/1:1,21:22:51.16:642,51,0	1/1:0,17:16:48.15:604,48,0	1/1:3,16:19:45.14:566,45,0	1/1:1,18:19:54.16:667,54,0	1/1:0,19:19:51.16:642,51,0	1/1:0,14:14:42.13:528,42,0
chr10	23328647	.	A	AAT	2575.27	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-9.742;DP=301;FS=29.407;HRun=0;HaplotypeScore=35.5626;InbreedingCoeff=0.8919;MQ=82.88;MQ0=1;MQRankSum=-0.907;QD=35.28;ReadPosRankSum=-2.240;VQSLOD=2.0422;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:30.10:0,30,385	0/0:8,0:8:18.06:0,18,232	0/0:12,0:12:6.02:0,6,76	0/0:9,0:7:7.23:0,7,64	0/0:12,0:12:30.10:0,30,385	0/0:8,0:8:24.08:0,24,309	0/0:4,0:4:12.04:0,12,154	1/1:10,27:38:84.27:1384,84,0	0/0:11,0:11:30.08:0,30,372	0/0:7,0:7:21.07:0,21,270	0/0:15,0:15:36.12:0,36,463	0/0:8,0:8:15.05:0,15,193	0/0:9,0:9:27.07:0,27,334	0/0:9,0:9:27.09:0,27,346	0/0:9,0:9:18.06:0,18,232	0/0:15,0:15:42.14:0,42,540	0/0:15,0:15:42.14:0,42,540	0/0:10,0:10:15.05:0,15,193	0/0:9,0:9:21.07:0,21,270	0/0:15,0:15:30.10:0,30,386	0/0:5,0:5:9.03:0,9,116	0/0:3,0:3:9.03:0,9,116	0/0:6,0:6:18.06:0,18,232	0/0:10,0:10:27.09:0,27,348	0/0:6,0:6:18.05:0,18,220	1/1:1,9:9:24.08:405,24,0	1/1:0,13:13:24.08:405,24,0	1/1:2,10:12:33.11:539,33,0
chr10	23329231	.	A	AT	217.58	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-3.386;DP=462;FS=0.000;HRun=8;HaplotypeScore=48.5222;InbreedingCoeff=0.9520;MQ=84.90;MQ0=0;MQRankSum=-2.941;QD=21.76;ReadPosRankSum=0.082;VQSLOD=3.3088;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,10:10:27.08:312,27,0	0/0:5,0:5:12.01:0,12,110	0/0:18,0:18:32.03:0,32,278	0/0:16,0:16:36.80:0,37,315	0/0:29,0:29:75.01:0,75,679	0/0:17,0:17:48.03:0,48,439	0/0:12,0:12:36.01:0,36,326	0/0:33,0:33:69.01:0,69,627	0/0:13,0:13:36.02:0,36,330	0/0:21,0:21:60.03:0,60,547	0/0:17,0:17:42:0,42,379	0/0:21,0:21:54.03:0,54,494	0/0:13,0:13:39.02:0,39,357	0/0:18,0:18:45:0,45,403	0/0:16,0:15:42.02:0,42,384	0/0:22,0:22:63.03:0,63,577	0/0:20,0:20:43.19:0,43,436	0/0:23,0:23:54.02:0,54,494	0/0:19,0:19:42:0,42,384	0/0:20,0:20:60.03:0,60,549	0/0:9,0:9:21:0,21,188	0/0:6,0:6:18.01:0,18,165	0/0:9,0:10:29.05:0,29,253	0/0:11,0:11:30.01:0,30,275	0/0:12,0:12:36.01:0,36,325	0/0:19,0:19:54.02:0,54,490	0/0:24,0:24:62.70:0,63,571	0/0:8,0:8:21.01:0,21,192
chr10	23329463	.	AG	A	201.08	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.405;DP=402;FS=0.000;HRun=1;HaplotypeScore=37.3753;InbreedingCoeff=0.7430;MQ=63.47;MQ0=0;MQRankSum=-0.586;QD=28.73;ReadPosRankSum=0.873;VQSLOD=3.2447;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,7:7:21.07:293,21,0	0/0:5,0:5:15.05:0,15,225	0/0:5,0:5:12.01:0,12,139	0/0:3,0:2:3.01:0,3,45	0/0:28,0:28:84.26:0,84,1217	0/0:9,0:9:27.09:0,27,404	0/0:4,0:4:12.04:0,12,180	0/0:44,0:44:99:0,132,1922	0/0:8,0:8:24.07:0,24,339	0/0:24,0:24:72.24:0,72,1054	0/0:26,0:26:78.25:0,78,1147	0/0:8,0:8:24.07:0,24,339	0/0:11,0:11:33.09:0,33,473	0/0:7,0:7:21.07:0,21,314	0/0:15,0:15:45.14:0,45,654	0/0:11,0:11:33.10:0,33,474	0/0:27,0:27:81.25:0,81,1151	0/0:42,0:42:99:0,117,1642	0/0:16,0:16:48.16:0,48,719	0/0:16,0:16:48.14:0,48,678	0/0:8,0:8:24.08:0,24,359	0/0:3,0:3:9.02:0,9,115	0/0:8,0:8:24.07:0,24,339	0/0:6,0:6:18.04:0,18,248	0/0:11,0:11:33.07:0,33,451	0/0:12,0:12:36.12:0,36,539	0/0:26,0:26:75.25:0,75,1118	0/0:12,0:12:36.05:0,36,511
chr10	23331651	.	T	TA	2518.85	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-9.599;DP=447;FS=6.333;HRun=4;HaplotypeScore=44.8786;InbreedingCoeff=0.9792;MQ=83.71;MQ0=0;MQRankSum=-3.038;QD=30.35;ReadPosRankSum=0.473;VQSLOD=3.5061;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:45.09:0,45,487	0/0:7,0:7:21.03:0,21,225	0/0:15,0:15:32.21:0,32,377	0/0:17,0:17:36.13:0,36,370	0/0:24,0:24:63.18:0,63,714	0/0:25,0:25:69.20:0,69,782	0/0:13,0:13:39.03:0,39,416	0/0:21,0:21:48.31:0,48,574	0/0:16,0:16:45.13:0,45,510	0/0:14,0:14:42.11:0,42,463	0/0:16,0:16:42.10:0,42,466	0/0:11,0:11:27.08:0,27,306	0/0:23,0:23:66.16:0,66,736	0/0:19,0:19:54.14:0,54,603	0/0:14,0:14:42.12:0,42,476	0/0:23,0:23:63.16:0,63,705	1/1:1,17:18:48.16:656,48,0	1/1:0,12:12:30.10:410,30,0	1/1:8,22:30:66.18:869,66,0	1/1:1,13:14:39.09:512,39,0	1/1:3,6:9:18.06:246,18,0	0/0:6,0:6:15.04:0,15,170	0/0:9,0:9:27.08:0,27,306	0/0:11,0:11:27.04:0,27,284	0/0:17,0:17:48.12:0,48,534	0/0:24,0:24:66.16:0,66,730	0/0:19,0:19:57.15:0,57,638	0/0:3,0:3:9.03:0,9,102
chr10	23333156	.	T	TA	3062.97	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-5.257;DP=579;FS=16.556;HRun=9;HaplotypeScore=65.7523;InbreedingCoeff=0.9971;MQ=64.39;MQ0=2;MQRankSum=-3.487;QD=23.56;ReadPosRankSum=1.769;VQSLOD=2.8302;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,22:30:78.21:856,78,0	0/0:11,0:11:26.99:0,27,234	0/0:21,0:18:47.56:0,48,392	0/0:13,0:9:20.92:0,21,173	0/0:20,0:20:47.97:0,48,417	0/0:19,0:19:50.99:0,51,443	0/0:17,0:17:32.97:0,33,283	0/0:19,0:19:47.99:0,48,417	0/0:14,0:14:35.97:0,36,309	0/0:24,0:24:62.97:0,63,547	0/0:24,0:24:68.96:0,69,591	0/0:19,0:19:47.94:0,48,409	0/0:32,0:32:74.95:0,75,650	0/0:22,0:22:53.99:0,54,468	0/0:19,0:19:47.98:0,48,417	0/0:14,0:14:32.93:0,33,277	1/1:5,13:18:36.06:385,36,0	1/1:4,16:20:42.11:464,42,0	1/1:0,13:13:39.10:425,39,0	1/1:8,30:39:66.99:935,67,0	1/1:2,7:8:18.01:186,18,0	0/0:18,0:18:44.97:0,45,386	0/0:20,0:20:44.97:0,45,391	0/0:21,0:21:44.96:0,45,386	0/0:29,0:29:68.98:0,69,599	0/0:35,0:35:99:0,102,885	0/0:25,0:25:62.97:0,63,546	0/0:13,0:13:38.99:0,39,339
chr10	23333222	.	T	TTGTGTG	4452.63	PASS	AB=0.985;AC=41;AF=0.732;AN=56;BaseQRankSum=-1.727;DP=535;FS=2.056;HRun=0;HaplotypeScore=166.1084;InbreedingCoeff=0.0578;MQ=51.54;MQ0=11;MQRankSum=-2.949;QD=9.37;ReadPosRankSum=-1.796;VQSLOD=3.9065;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:32,0:31:0.47:1,0,0	1/1:6,0:6:3.01:90,3,0	0/0:23,0:10:2.59:0,3,10	0/0:34,0:16:1.64:0,2,9	1/1:13,0:13:2.98:21,3,0	1/1:24,0:24:7.34:225,7,0	0/1:23,0:23:32.92:133,0,33	1/1:20,0:22:23.90:229,24,0	1/1:21,0:21:26.98:568,27,0	1/1:15,0:14:18.51:355,19,0	0/1:19,0:19:5.99:26,0,6	0/1:16,0:16:8.96:265,0,9	0/1:23,0:23:20.09:420,0,20	1/1:26,0:26:16.29:461,16,0	1/1:10,8:19:3:27,3,0	1/1:7,8:17:15.94:352,16,0	0/1:11,0:11:5.45:10,0,5	0/0:3,0:3:2.98:0,3,22	0/1:4,0:4:0:0,0,0	1/1:14,0:14:2.67:11,3,0	1/1:3,0:3:0.47:1,0,0	0/1:18,0:18:3.74:130,0,4	0/1:22,0:23:38.80:41,0,39	0/1:29,0:29:26.21:66,0,26	1/1:27,0:27:12:213,12,0	1/1:35,0:33:44.85:569,45,0	1/1:7,0:17:3.01:79,3,0	1/1:8,0:10:12.47:160,12,0
chr10	23333251	.	T	TGTGTGC	4999.55	PASS	AB=0.797;AC=29;AF=0.659;AN=44;BaseQRankSum=1.064;DP=506;FS=14.809;HRun=0;HaplotypeScore=142.3517;InbreedingCoeff=-0.2121;MQ=60.02;MQ0=13;MQRankSum=-2.070;QD=12.22;ReadPosRankSum=5.842;VQSLOD=2.2381;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	1/1:1,3:6:3.01:106,3,0	0/0:22,0:8:4.30:0,4,84	0/0:29,0:13:8.70:0,9,95	1/1:5,9:16:3:44,3,0	1/1:1,13:19:17.38:335,17,0	1/1:5,14:29:0.07:251,0,0	0/1:21,0:20:31.33:31,0,226	1/1:4,10:19:27.09:735,27,0	1/1:3,10:16:37.06:629,37,0	1/1:6,13:23:7.49:62,7,0	0/1:4,11:16:8.88:329,0,9	0/1:4,15:22:33.83:514,0,34	1/1:10,16:31:26.58:618,27,0	0/1:15,0:14:33.27:33,0,55	0/1:17,0:16:50.35:248,0,50	./.	./.	./.	./.	./.	0/1:4,12:19:1.59:185,0,2	0/1:4,16:26:5.61:111,0,6	0/1:11,20:38:13.46:168,0,13	1/1:2,20:24:7.02:279,7,0	0/1:26,1:24:99:202,0,127	0/1:9,0:9:41.68:42,0,95	0/1:12,0:12:52.06:78,0,52
chr10	23333373	.	TA	T	890.28	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=16.819;DP=555;FS=3.712;HRun=2;HaplotypeScore=88.8081;InbreedingCoeff=0.8555;MQ=81.04;MQ0=0;MQRankSum=-4.962;QD=5.46;ReadPosRankSum=1.909;VQSLOD=0.9469;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:90.30:0,90,1347	0/0:9,0:9:24.08:0,24,360	0/0:17,0:17:51.17:0,51,748	0/0:16,0:16:45.15:0,45,667	0/0:32,0:32:96.33:0,96,1436	0/0:20,0:20:57.19:0,57,853	0/0:14,0:14:42.13:0,42,611	1/1:25,0:24:39.65:204,40,0	0/0:31,0:31:90.28:0,90,1307	0/0:33,0:33:96.31:0,96,1418	0/0:23,0:23:66.19:0,66,930	0/0:15,0:15:45.15:0,45,674	0/0:32,0:32:93.28:0,93,1369	0/0:27,0:27:78.26:0,78,1151	1/1:20,1:21:43.92:183,44,0	1/1:22,0:22:22.34:146,22,0	0/1:9,0:9:6.21:6,0,20	1/1:3,0:3:5.15:14,5,0	1/1:6,0:6:6.54:19,7,0	1/1:12,0:12:21.18:65,21,0	0/0:4,0:4:0.97:0,1,19	0/0:18,0:18:51.16:0,51,744	0/0:23,0:23:66.22:0,66,987	0/0:15,0:15:42.10:0,42,604	0/0:32,0:32:96.32:0,96,1421	1/1:26,2:28:17.83:239,18,0	1/1:29,0:27:16.97:143,17,0	1/1:7,1:8:9.74:74,10,0
chr10	23333374	.	A	AT	4107.63	PASS	AB=0.667;AC=21;AF=0.375;AN=56;BaseQRankSum=16.977;DP=548;FS=5.372;HRun=1;HaplotypeScore=78.6161;InbreedingCoeff=0.9114;MQ=81.30;MQ0=0;MQRankSum=-5.570;QD=24.74;ReadPosRankSum=1.614;VQSLOD=3.5837;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:90.30:0,90,1258	0/0:8,0:8:24.08:0,24,334	0/0:17,0:17:51.16:0,51,697	0/0:16,0:16:45.15:0,45,624	0/0:32,0:32:96.32:0,96,1337	0/0:20,0:20:57.19:0,57,795	0/0:14,0:14:42.13:0,42,571	1/1:2,23:24:63.56:703,64,0	0/0:31,0:31:90.27:0,90,1222	0/0:33,0:33:96.31:0,96,1324	0/0:22,0:22:66.18:0,66,873	0/0:15,0:15:45.15:0,45,629	0/0:31,0:31:93.28:0,93,1279	0/0:26,0:26:78.25:0,78,1076	1/1:1,20:21:59.92:562,60,0	1/1:3,18:21:36.42:513,36,0	1/1:1,8:9:21.08:155,21,0	1/1:0,3:3:8.99:77,9,0	1/1:3,4:7:11.70:104,12,0	1/1:0,12:12:35.98:319,36,0	0/1:2,2:4:16.87:19,0,17	0/0:17,0:17:51.16:0,51,695	0/0:22,0:22:66.22:0,66,923	0/0:15,0:15:42.10:0,42,565	0/0:32,0:32:96.31:0,96,1326	1/1:3,24:27:39.13:729,39,0	1/1:6,23:27:77.84:727,78,0	1/1:2,6:8:23.62:200,24,0
chr10	23333375	.	A	AG	4091.43	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=16.867;DP=556;FS=5.438;HRun=0;HaplotypeScore=79.7750;InbreedingCoeff=0.9627;MQ=81.62;MQ0=0;MQRankSum=-7.543;QD=23.79;ReadPosRankSum=1.833;VQSLOD=4.4997;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:90.30:0,90,1257	0/0:8,0:8:24.08:0,24,335	0/0:19,0:19:51.17:0,51,712	0/0:15,0:15:42.14:0,42,587	0/0:33,0:33:96.30:0,96,1322	0/0:20,0:20:60.14:0,60,798	0/0:14,0:14:42.13:0,42,569	1/1:3,23:25:72.09:731,72,0	0/0:31,0:31:87.27:0,87,1183	0/0:33,0:33:96.31:0,96,1315	0/0:20,0:20:60.19:0,60,823	0/0:16,0:16:45.15:0,45,629	0/0:32,0:32:93.24:0,93,1276	0/0:25,0:25:75.25:0,75,1048	1/1:2,20:22:59.92:562,60,0	1/1:3,18:21:50.92:504,51,0	1/1:2,8:10:24.83:190,25,0	1/1:0,3:3:8.99:77,9,0	1/1:4,4:8:14.26:130,14,0	1/1:0,12:12:35.98:318,36,0	1/1:2,2:4:3:25,3,0	0/0:17,0:17:51.16:0,51,698	0/0:22,0:22:66.22:0,66,923	0/0:17,0:17:42.05:0,42,562	0/0:31,0:31:93.30:0,93,1283	1/1:5,24:29:32.21:685,32,0	1/1:6,23:27:70.82:671,71,0	1/1:2,6:8:23.66:198,24,0
chr10	23333685	.	G	GT	4558.78	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=16.446;DP=518;FS=6.221;HRun=1;HaplotypeScore=200.1991;InbreedingCoeff=0.9801;MQ=87.97;MQ0=0;MQRankSum=-15.836;QD=24.64;ReadPosRankSum=1.391;VQSLOD=4.4158;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,3:15:29.83:342,30,0	0/0:4,0:4:12.04:0,12,156	0/0:27,0:27:75.24:0,75,957	0/0:15,0:15:42.10:0,42,508	0/0:31,0:31:93.29:0,93,1193	0/0:20,0:20:57.16:0,57,724	0/0:22,0:22:60.18:0,60,765	1/1:26,1:27:34.58:602,35,0	0/0:17,0:17:48.16:0,48,623	0/0:32,0:32:93.25:0,93,1188	0/0:25,0:25:69.21:0,69,880	0/0:18,0:18:51.12:0,51,619	0/0:34,0:34:93.28:0,93,1189	0/0:23,0:23:69.21:0,69,879	1/1:25,3:28:72.99:768,73,0	1/1:20,0:20:54.02:564,54,0	1/1:9,1:10:15.89:184,16,0	1/1:4,0:4:12.02:126,12,0	1/1:12,0:12:23.82:273,24,0	1/1:8,0:8:21.01:196,21,0	1/1:8,0:8:12.70:137,13,0	0/0:13,0:13:39.12:0,39,494	0/0:16,0:16:42.14:0,42,544	0/0:14,0:14:42.13:0,42,533	0/0:22,0:22:66.20:0,66,844	1/1:21,1:22:22.81:563,23,0	1/1:26,0:26:62.62:709,63,0	1/1:4,1:5:11.95:93,12,0
chr10	23333687	.	C	CTGCTTGAGAACCTTCATCTCCTGATGAGGA	31352.75	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=11.010;DP=477;FS=12.318;HRun=0;HaplotypeScore=346.8010;InbreedingCoeff=0.9027;MQ=93.19;MQ0=0;MQRankSum=-12.620;QD=214.74;ReadPosRankSum=-0.521;VQSLOD=3.6497;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:16,1:17:42.14:3886,42,0	0/0:4,0:4:12.04:0,12,978	0/0:27,0:27:78.20:0,78,3556	0/0:18,0:18:48.13:0,48,2331	0/0:31,0:31:93.31:0,93,6507	0/0:19,0:19:57.20:0,57,3859	0/0:21,0:21:63.20:0,63,3204	1/1:16,0:16:29.30:2345,29,0	0/0:17,0:17:48.16:0,48,3446	0/0:33,0:33:96.33:0,96,6691	0/0:23,0:23:69.24:0,69,4378	0/0:17,0:17:51.15:0,51,3228	0/0:33,0:33:96.26:0,96,6778	0/0:22,0:22:66.17:0,66,4255	1/1:12,2:14:40.94:4008,41,0	1/1:23,0:23:66.19:6254,66,0	1/1:5,1:6:12.04:948,12,0	1/1:4,0:4:9.03:874,9,0	1/1:9,0:9:10.35:1179,10,0	1/1:10,0:10:24.08:2475,24,0	0/1:8,0:8:5.94:298,0,6	0/0:13,0:13:39.12:0,39,2141	0/0:15,0:15:45.14:0,45,3213	0/0:15,0:15:42.10:0,42,2597	0/0:23,0:23:66.22:0,66,4440	1/1:15,1:16:45.14:3476,45,0	1/1:21,0:21:46.08:5163,46,0	1/1:1,1:2:6.02:446,6,0
chr10	23335540	.	CTT	C	2119.93	PASS	AB=0.553;AC=7;AF=0.125;AN=56;BaseQRankSum=4.942;DP=437;FS=3.153;HRun=9;HaplotypeScore=58.6500;InbreedingCoeff=0.8030;MQ=70.86;MQ0=1;MQRankSum=0.839;QD=25.54;ReadPosRankSum=1.315;VQSLOD=3.2482;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:63.17:0,63,1005	0/0:11,0:11:33.08:0,33,513	0/0:11,0:10:23.80:0,24,330	0/0:11,0:9:20.80:0,21,323	0/0:18,0:19:56.38:0,56,844	0/0:11,0:11:30.06:0,30,463	0/0:11,0:11:33.05:0,33,488	1/1:0,14:14:42.11:479,42,0	0/0:15,0:15:45.15:0,45,716	0/0:22,0:22:54.18:0,54,872	0/0:21,0:21:63.11:0,63,952	0/0:10,0:10:27.05:0,27,414	0/0:20,0:20:60.12:0,60,847	0/0:13,0:13:33.10:0,33,519	0/0:1,0:19:44.92:0,45,158	0/0:3,0:18:29.94:0,30,105	0/0:10,0:10:30.10:0,30,492	0/0:7,0:7:18.06:0,18,295	0/0:14,0:14:42.13:0,42,654	0/0:26,0:26:60.20:0,60,974	0/0:2,0:2:6.02:0,6,98	0/0:12,0:12:30.10:0,30,492	0/0:16,0:16:42.13:0,42,666	0/0:11,0:11:27.09:0,27,442	0/0:20,0:21:59.98:0,60,875	0/1:5,21:25:35.31:601,0,35	1/1:1,26:27:78.23:909,78,0	1/1:7,9:16:24.06:280,24,0
chr10	23337940	.	GC	G	8670.12	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=12.862;DP=495;FS=4.524;HRun=2;HaplotypeScore=49.4245;InbreedingCoeff=0.9935;MQ=71.59;MQ0=0;MQRankSum=1.789;QD=34.82;ReadPosRankSum=3.140;VQSLOD=5.0898;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:30.09:0,30,428	1/1:0,7:7:18.06:234,18,0	0/0:8,0:8:18.05:0,18,242	0/0:7,0:7:15.04:0,15,207	1/1:0,19:19:54.18:701,54,0	1/1:0,26:26:75.24:974,75,0	1/1:1,10:11:30.10:390,30,0	0/0:41,0:41:99:0,123,1789	1/1:0,18:18:48.16:623,48,0	1/1:0,15:15:45.14:572,45,0	1/1:0,31:31:87.20:1092,87,0	1/1:0,17:17:45.15:584,45,0	1/1:1,25:26:66.21:857,66,0	1/1:0,13:13:33.11:428,33,0	0/0:22,0:22:66.21:0,66,969	0/0:21,0:21:21.25:0,21,814	0/0:17,0:17:51.17:0,51,762	0/0:15,0:15:45.15:0,45,674	0/0:20,0:20:57.18:0,57,836	0/0:20,0:20:60.20:0,60,899	0/0:11,0:11:33.10:0,33,475	1/1:0,14:14:35.96:424,36,0	1/1:0,20:20:51.16:662,51,0	1/1:0,7:7:18.06:234,18,0	1/1:1,24:25:69.22:896,69,0	0/0:14,0:14:42.14:0,42,630	0/0:32,0:32:96.31:0,96,1408	0/0:8,0:8:24.08:0,24,357
chr10	23338334	.	CA	C	6921.76	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=15.531;DP=561;FS=14.640;HRun=2;HaplotypeScore=63.2312;InbreedingCoeff=0.9920;MQ=81.04;MQ0=0;MQRankSum=-3.607;QD=33.93;ReadPosRankSum=-0.657;VQSLOD=3.1333;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,14:14:39.08:487,39,0	0/0:7,0:7:21.07:0,21,315	0/0:14,0:14:36.09:0,36,490	0/0:15,0:15:38.43:0,38,475	0/0:29,0:29:84.28:0,84,1237	0/0:30,0:29:90.29:0,90,1308	0/0:14,0:14:42.10:0,42,568	1/1:3,41:44:99:1554,123,0	0/0:13,0:13:39.13:0,39,584	0/0:21,0:21:63.20:0,63,910	0/0:22,0:22:63.21:0,63,943	0/0:20,0:20:60.18:0,60,859	0/0:33,0:33:99:0,99,1462	0/0:23,0:23:69.23:0,69,1033	0/0:26,0:26:75.25:0,75,1123	0/0:13,0:13:39.12:0,39,548	1/1:0,13:13:30.10:389,30,0	1/1:0,12:12:30.10:389,30,0	1/1:1,6:7:18.04:216,18,0	1/1:0,26:26:72.19:915,72,0	1/1:0,23:23:60.19:777,60,0	0/0:18,0:18:54.17:0,54,789	0/0:17,0:17:51.17:0,51,763	0/0:8,0:8:24.07:0,24,341	0/0:34,0:34:99:0,99,1462	1/1:2,18:20:12.20:640,12,0	1/1:0,37:37:99:1323,102,0	1/1:0,8:8:18.04:233,18,0
chr10	23338602	.	TA	T	1133.46	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.265;DP=527;FS=0.536;HRun=10;HaplotypeScore=54.4861;InbreedingCoeff=0.9286;MQ=74.55;MQ0=1;MQRankSum=-2.980;QD=19.89;ReadPosRankSum=-0.741;VQSLOD=4.1635;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,15:19:47.98:416,48,0	0/0:5,0:5:12.03:0,12,133	0/0:14,0:13:28.62:0,29,288	0/0:11,0:10:3.67:0,4,122	0/0:28,0:28:72.17:0,72,775	0/0:16,0:16:42.10:0,42,457	0/0:9,0:9:21.06:0,21,232	0/0:32,0:32:93.21:0,93,999	0/0:23,0:23:51.13:0,51,557	0/0:22,0:22:60.11:0,60,649	0/0:27,0:27:66.17:0,66,723	0/0:21,0:21:55.15:0,55,644	0/0:27,0:27:53.23:0,53,738	0/0:22,0:22:54.15:0,54,597	1/1:0,21:21:62.99:547,63,0	1/1:3,14:17:35.99:312,36,0	0/0:20,0:20:54.13:0,54,589	0/0:17,0:17:35.62:0,36,415	0/0:25,0:25:63.13:0,63,675	0/0:17,0:17:39.11:0,39,431	0/0:9,0:9:17.97:0,18,183	0/0:9,0:9:24.06:0,24,258	0/0:15,0:16:42.10:0,42,457	0/0:12,0:12:36.10:0,36,398	0/0:15,0:16:47.96:0,48,512	0/0:33,0:33:90.23:0,90,981	0/0:31,0:31:81.20:0,81,886	0/0:8,0:8:18.03:0,18,189
chr10	23338645	.	T	TG	566.96	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.514;DP=535;FS=3.275;HRun=1;HaplotypeScore=53.1461;InbreedingCoeff=0.9860;MQ=78.98;MQ0=0;MQRankSum=-2.925;QD=33.35;ReadPosRankSum=0.430;VQSLOD=3.2906;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,17:17:45.15:662,45,0	0/0:6,0:6:18.06:0,18,232	0/0:14,0:14:39.05:0,39,439	0/0:13,0:13:22.11:0,22,354	0/0:27,0:27:75.22:0,75,942	0/0:11,0:11:33.11:0,33,427	0/0:15,0:15:45.13:0,45,569	0/0:39,0:39:99:0,111,1347	0/0:11,0:11:33.09:0,33,401	0/0:28,1:29:43.17:0,43,1045	0/0:20,0:20:60.17:0,60,749	0/0:19,0:19:51.16:0,51,660	0/0:22,0:22:66.21:0,66,842	0/0:19,0:19:57.14:0,57,705	0/0:26,0:26:75.23:0,75,958	0/0:17,0:17:45.15:0,45,583	0/0:27,0:27:75.15:0,75,920	0/0:13,0:13:36.09:0,36,442	0/0:31,0:31:90.26:0,90,1125	0/0:19,0:19:51.15:0,51,646	0/0:10,0:10:27.06:0,27,320	0/0:12,0:12:36.12:0,36,464	0/0:14,0:14:42.12:0,42,517	0/0:18,0:18:54.16:0,54,684	0/0:19,0:19:57.17:0,57,724	0/0:30,0:30:81.23:0,81,1010	0/0:25,0:25:72.18:0,72,889	0/0:12,0:12:27.05:0,27,331
chr10	23339017	.	A	AT	3737.20	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=5.805;DP=558;FS=12.658;HRun=1;HaplotypeScore=68.4122;InbreedingCoeff=0.9944;MQ=82.13;MQ0=0;MQRankSum=-2.244;QD=40.62;ReadPosRankSum=1.754;VQSLOD=3.3467;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:60.17:0,60,762	0/0:5,0:5:15.04:0,15,181	0/0:19,0:19:54.08:0,54,615	0/0:15,0:15:42.12:0,42,526	0/0:17,0:17:45.15:0,45,584	0/0:29,0:29:81.26:0,81,1045	0/0:22,0:22:57.17:0,57,725	1/1:2,22:24:63.20:924,63,0	0/0:18,0:18:54.16:0,54,687	0/0:20,0:20:60.18:0,60,758	0/0:16,0:15:45.15:0,45,583	0/0:21,0:21:60.19:0,60,779	0/0:25,0:25:72.19:0,72,891	0/0:17,0:17:51.17:0,51,661	0/0:27,0:27:78.24:0,78,998	0/0:27,0:27:78.20:0,78,955	0/0:25,0:25:66.19:0,66,841	0/0:15,0:15:39.13:0,39,506	0/0:25,0:25:69.22:0,69,894	0/0:22,0:22:60.19:0,60,779	0/0:8,0:8:21.07:0,21,272	0/0:18,0:18:54.17:0,54,696	0/0:15,0:15:36.12:0,36,467	0/0:17,0:17:51.17:0,51,662	0/0:20,0:19:45.15:0,45,584	1/1:0,20:20:57.19:854,57,0	1/1:1,27:29:81.27:1209,81,0	1/1:0,17:17:51.17:750,51,0
chr10	23339306	.	G	GGAA	26635.69	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-7.873;DP=695;FS=2.140;HRun=0;HaplotypeScore=102.7226;InbreedingCoeff=0.9922;MQ=68.48;MQ0=18;MQRankSum=-2.375;QD=47.23;ReadPosRankSum=5.736;VQSLOD=6.8740;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,99,1595	1/1:0,9:9:24.08:553,24,0	0/0:36,0:24:19.29:0,19,537	0/0:54,0:38:64.71:0,65,906	1/1:1,13:15:27.09:612,27,0	1/1:4,20:24:45.15:998,45,0	1/1:1,31:31:48.16:1105,48,0	1/1:4,23:20:37.65:786,38,0	1/1:2,26:28:66.16:1457,66,0	1/1:1,28:28:69.07:1415,69,0	1/1:0,13:11:21.03:434,21,0	1/1:1,21:23:60.20:1348,60,0	1/1:3,31:33:80.96:1854,81,0	1/1:3,23:27:63.22:1400,63,0	1/1:2,30:32:61.79:1725,62,0	1/1:2,29:31:60.21:1351,60,0	1/1:0,24:24:54.19:1245,54,0	1/1:3,26:29:22.23:1271,22,0	1/1:3,10:10:30.05:557,30,0	1/1:1,17:18:42.14:962,42,0	1/1:1,25:28:66.23:1519,66,0	1/1:0,16:16:42.14:967,42,0	1/1:0,13:14:30.06:641,30,0	1/1:1,27:29:57.13:1260,57,0	1/1:6,8:13:24.04:503,24,0	1/1:1,22:23:65.96:1318,66,0	1/1:1,14:15:35.91:798,36,0	1/1:0,11:11:24.08:553,24,0
chr10	23339531	.	T	TG	2551.71	PASS	AB=0.892;AC=12;AF=0.214;AN=56;BaseQRankSum=-5.397;DP=591;FS=0.000;HRun=1;HaplotypeScore=74.8352;InbreedingCoeff=0.7748;MQ=64.25;MQ0=0;MQRankSum=-2.536;QD=20.41;ReadPosRankSum=-0.000;VQSLOD=3.5705;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,25:27:17.23:685,17,0	0/0:9,0:9:24.08:0,24,312	0/1:20,3:20:83.87:84,0,458	0/1:16,2:15:46.96:47,0,396	0/0:29,0:29:87.28:0,87,1124	0/0:20,1:21:18.33:0,18,718	0/0:20,0:19:57.18:0,57,734	1/1:1,11:10:27.09:387,27,0	0/0:18,0:18:51.17:0,51,662	0/0:30,0:30:84.27:0,84,1090	0/0:15,0:15:42.14:0,42,544	0/0:24,0:24:72.23:0,72,935	0/0:25,0:25:69.21:0,69,881	0/0:28,0:28:84.27:0,84,1089	0/0:15,0:15:42.14:0,42,545	0/0:11,0:11:33.11:0,33,428	0/0:32,0:32:96.30:0,96,1230	0/0:17,0:17:48.16:0,48,621	0/0:24,0:23:66.19:0,66,838	0/0:29,0:29:87.27:0,87,1112	0/0:35,0:35:99:0,105,1334	0/0:22,0:22:54.17:0,54,695	0/0:14,0:14:42.14:0,42,544	0/0:25,1:26:72.23:0,72,935	0/0:22,0:22:63.19:0,63,805	1/1:2,19:21:18.23:770,18,0	1/1:3,12:15:39.13:578,39,0	1/1:0,7:7:12.04:180,12,0
chr10	23341492	.	G	GA	12798.03	PASS	AB=0.913;AC=29;AF=0.518;AN=56;BaseQRankSum=15.879;DP=619;FS=4.735;HRun=1;HaplotypeScore=122.0625;InbreedingCoeff=0.9265;MQ=84.44;MQ0=0;MQRankSum=-3.088;QD=37.75;ReadPosRankSum=0.921;VQSLOD=4.4254;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:75.18:0,75,939	1/1:0,6:6:15.05:225,15,0	0/0:21,0:21:50.81:0,51,717	0/0:18,0:18:39.11:0,39,560	1/1:2,27:29:72.20:1049,72,0	1/1:1,14:15:42.14:629,42,0	1/1:2,21:23:63.21:944,63,0	0/0:26,0:26:78.25:0,78,1013	1/1:0,18:18:54.18:809,54,0	1/1:0,29:29:87.28:1280,87,0	1/1:1,16:17:45.11:647,45,0	1/1:1,35:35:99:1483,99,0	1/1:1,21:22:60.20:886,60,0	1/1:0,28:28:75.25:1122,75,0	0/0:29,0:28:81.25:0,81,1037	0/0:20,1:21:15.22:0,15,695	0/0:17,0:17:51.14:0,51,643	0/0:13,0:13:39.13:0,39,506	0/0:22,0:22:60.17:0,60,753	0/0:27,0:27:75.23:0,75,960	0/0:22,0:22:63.19:0,63,803	1/1:1,13:14:36.04:489,36,0	1/1:0,27:27:72.24:1079,72,0	1/1:0,17:17:42.14:613,42,0	1/1:1,36:37:99:1528,102,0	0/1:19,2:21:14.73:15,0,592	0/0:21,0:21:63.19:0,63,803	0/0:16,0:16:48.16:0,48,623
chr10	23341665	.	GCACA	G	5981.10	PASS	AB=0.703;AC=46;AF=0.885;AN=52;BaseQRankSum=-2.119;DP=744;FS=13.680;HRun=0;HaplotypeScore=146.5319;InbreedingCoeff=0.5275;MQ=51.23;MQ0=31;MQRankSum=1.729;QD=10.51;ReadPosRankSum=2.366;VQSLOD=3.5600;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:41:21.07:0,21,363	1/1:11,0:12:12.03:159,12,0	./.	./.	1/1:11,9:20:23.93:353,24,0	1/1:16,1:19:21.05:278,21,0	1/1:14,7:23:20.45:243,20,0	0/0:23,0:20:8.71:0,9,28	1/1:7,10:17:17.80:248,18,0	1/1:17,7:22:28.15:386,28,0	1/1:12,8:19:19.29:263,19,0	1/1:15,7:23:4:164,4,0	1/1:17,13:34:16.69:329,17,0	1/1:13,15:28:34.67:467,35,0	0/1:17,0:26:16.28:68,0,16	1/1:11,0:24:27.04:262,27,0	1/1:12,10:22:16.84:372,17,0	1/1:8,5:12:11.25:148,11,0	1/1:19,4:21:12.04:179,12,0	1/1:20,9:31:22.20:366,22,0	1/1:38,1:37:21.17:253,21,0	1/1:16,11:28:21.88:285,22,0	1/1:17,7:24:15.47:178,15,0	1/1:11,13:26:30.03:445,30,0	1/1:9,8:18:5.15:35,5,0	1/1:19,0:30:31.53:236,32,0	0/1:12,0:22:3.21:118,0,3	1/1:2,0:12:16.83:145,17,0
chr10	23342662	.	TC	T	3938.45	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=-13.317;DP=707;FS=9.010;HRun=4;HaplotypeScore=121.0295;InbreedingCoeff=0.7277;MQ=82.79;MQ0=0;MQRankSum=-3.416;QD=19.50;ReadPosRankSum=-4.664;VQSLOD=1.3709;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:4,26:30:72.22:861,72,0	0/0:10,0:10:28.12:0,28,141	0/0:26,0:26:72.11:0,72,936	0/0:17,0:17:35.70:0,36,455	0/0:39,0:39:78.35:0,78,476	0/0:43,0:43:87.29:0,87,535	0/0:24,0:24:41.72:0,42,269	0/1:30,0:30:5.17:5,0,211	0/1:20,0:20:0.48:0,0,179	0/0:37,0:37:14.22:0,14,262	0/0:30,0:30:5.74:0,6,291	0/1:25,0:25:61.78:62,0,175	0/0:30,0:30:51.54:0,52,332	0/0:23,0:23:16.76:0,17,230	0/0:33,0:33:96.32:0,96,1336	0/0:25,0:25:75.24:0,75,1028	1/1:0,20:20:51.10:594,51,0	1/1:1,24:25:63.19:753,63,0	1/1:0,12:12:36.03:370,36,0	1/1:1,29:30:84.26:1006,84,0	1/1:0,10:10:24.07:288,24,0	0/0:23,0:23:64.32:0,64,314	0/0:28,0:28:1.43:0,1,263	0/0:18,0:18:40.72:0,41,211	0/0:32,0:32:53.85:0,54,361	0/0:24,0:24:61.37:0,61,265	0/0:32,0:32:83.04:0,83,428	0/0:11,0:11:31.16:0,31,160
chr10	23343906	.	A	AT	2483.80	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=-9.467;DP=494;FS=2.721;HRun=8;HaplotypeScore=48.1228;InbreedingCoeff=0.8055;MQ=70.16;MQ0=0;MQRankSum=0.268;QD=24.59;ReadPosRankSum=-0.980;VQSLOD=3.8582;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:59.99:0,60,536	0/0:5,0:6:17.05:0,17,143	0/1:8,0:8:22.39:22,0,51	0/0:8,0:8:15.72:0,16,135	0/0:31,0:31:90.05:0,90,823	0/0:18,0:19:50.06:0,50,445	0/0:12,0:14:37.08:0,37,314	1/1:8,19:27:57.15:647,57,0	0/0:16,0:16:47.99:0,48,429	0/0:22,0:22:57.02:0,57,522	0/0:23,0:23:66.04:0,66,604	0/0:12,0:13:38.06:0,38,335	0/0:16,0:16:42.02:0,42,384	0/0:22,0:22:57.02:0,57,521	0/0:22,0:22:63.03:0,63,576	0/0:28,0:28:78.04:0,78,714	0/0:17,0:17:42:0,42,380	0/0:7,0:7:12.01:0,12,110	0/0:16,0:16:30:0,30,275	0/0:18,0:18:54.03:0,54,494	0/0:9,0:9:24.01:0,24,220	0/0:19,0:19:54.03:0,54,494	0/0:22,0:22:51:0,51,461	0/0:12,0:12:36.02:0,36,330	0/0:11,0:11:30.02:0,30,275	1/1:2,31:33:68.80:1036,69,0	1/1:0,32:32:78.23:900,78,0	1/1:0,1:1:3.01:35,3,0
chr10	23344095	.	CCCT	C	18352.15	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-0.578;DP=550;FS=7.365;HRun=0;HaplotypeScore=133.3197;InbreedingCoeff=0.9660;MQ=85.77;MQ0=0;MQRankSum=-9.481;QD=36.63;ReadPosRankSum=6.612;VQSLOD=5.4454;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,21:23:45.15:744,45,0	1/1:0,9:9:27.09:447,27,0	0/0:25,0:25:75.14:0,75,1214	0/0:24,0:24:42.74:0,43,710	1/1:2,24:26:54.09:817,54,0	1/1:0,25:25:69.15:1070,69,0	1/1:0,21:21:54.18:893,54,0	1/1:3,15:18:45.09:664,45,0	1/1:0,16:16:45.15:745,45,0	1/1:1,19:20:57.18:918,57,0	1/1:2,17:18:42.10:626,42,0	1/1:1,17:18:48.16:782,48,0	1/1:0,17:17:39.13:645,39,0	1/1:0,18:18:42.14:695,42,0	1/1:1,17:18:36.12:596,36,0	1/1:0,34:34:81.28:1330,81,0	1/1:11,1:12:29.88:263,30,0	1/1:9,0:9:20.96:176,21,0	1/1:12,0:12:32.77:275,33,0	1/1:32,0:32:80.54:657,81,0	1/1:20,0:20:38.93:330,39,0	1/1:1,26:27:66.22:1080,66,0	1/1:2,22:24:66.22:1079,66,0	1/1:0,5:5:12.04:199,12,0	1/1:0,18:18:48.16:794,48,0	1/1:0,26:26:75.21:1186,75,0	1/1:2,28:30:69.24:1141,69,0	1/1:0,4:4:12.04:199,12,0
chr10	23344096	.	CCT	C	10874.66	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=3.005;DP=546;FS=10.543;HRun=0;HaplotypeScore=149.8590;InbreedingCoeff=0.9648;MQ=85.28;MQ0=0;MQRankSum=-9.083;QD=21.84;ReadPosRankSum=6.070;VQSLOD=4.6656;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:22,1:23:44.91:362,45,0	1/1:9,0:9:26.93:212,27,0	0/0:25,0:25:67.52:0,68,948	0/0:23,0:23:25.15:0,25,483	1/1:24,1:25:53.76:417,54,0	1/1:25,0:25:68.73:531,69,0	1/1:21,0:21:53.86:425,54,0	1/1:17,0:17:44.87:352,45,0	1/1:16,0:16:44.89:354,45,0	1/1:20,0:20:56.86:450,57,0	1/1:18,1:18:41.71:309,42,0	1/1:18,0:18:47.84:372,48,0	1/1:17,0:17:38.89:307,39,0	1/1:18,0:18:41.90:331,42,0	1/1:18,0:17:35.90:283,36,0	1/1:34,0:34:80.77:634,81,0	1/1:1,11:12:30.08:426,30,0	1/1:0,9:9:21.07:313,21,0	1/1:0,11:11:33.04:426,33,0	1/1:2,30:32:81.09:1087,81,0	1/1:2,18:20:39.09:551,39,0	1/1:27,0:27:65.79:514,66,0	1/1:23,1:24:65.78:514,66,0	1/1:5,0:5:11.97:94,12,0	1/1:18,0:18:47.90:386,48,0	1/1:26,0:26:74.78:588,75,0	1/1:30,0:30:68.82:543,69,0	1/1:4,0:4:11.97:95,12,0
chr10	23344097	.	CT	C	7507.65	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=3.723;DP=535;FS=10.576;HRun=1;HaplotypeScore=150.8442;InbreedingCoeff=0.9639;MQ=85.99;MQ0=0;MQRankSum=-9.189;QD=15.42;ReadPosRankSum=6.133;VQSLOD=3.9746;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:22:44.11:266,44,0	1/1:9,0:9:26.48:159,26,0	0/0:25,0:25:54.31:0,54,694	0/0:23,0:23:34.68:0,35,362	1/1:25,0:25:52.91:320,53,0	1/1:25,0:25:67.74:414,68,0	1/1:21,0:21:52.96:319,53,0	1/1:15,0:15:44.25:281,44,0	1/1:16,0:16:44.13:266,44,0	1/1:19,0:19:55.94:344,56,0	1/1:18,0:17:41.16:248,41,0	1/1:17,0:17:47.05:283,47,0	1/1:17,0:17:38.25:230,38,0	1/1:18,0:18:41.19:248,41,0	1/1:17,0:16:35.30:213,35,0	1/1:34,0:34:79.34:480,79,0	1/1:12,0:12:29.65:198,30,0	1/1:9,0:9:20.77:141,21,0	1/1:11,0:11:32.69:228,33,0	1/1:30,2:32:80.07:540,80,0	1/1:18,2:20:38.57:261,39,0	1/1:26,0:26:64.71:390,65,0	1/1:23,0:23:64.71:389,65,0	1/1:5,0:5:11.77:71,12,0	1/1:18,0:18:47.07:285,47,0	1/1:26,0:26:73.62:453,74,0	1/1:28,0:28:67.67:408,68,0	1/1:4,0:4:11.77:71,12,0
chr10	23344314	.	CTATGGGTGGGTCTTCCA	C	28399.55	PASS	AB=0.931;AC=29;AF=0.518;AN=56;BaseQRankSum=19.048;DP=664;FS=1.030;HRun=0;HaplotypeScore=313.4476;InbreedingCoeff=0.9216;MQ=79.98;MQ0=0;MQRankSum=-17.414;QD=86.32;ReadPosRankSum=6.039;VQSLOD=3.5786;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,108,7857	1/1:1,6:7:15.05:744,15,0	0/0:27,0:27:72.25:0,72,4785	0/0:22,0:22:60.21:0,60,3433	1/1:3,24:27:54.19:2468,54,0	1/1:5,25:30:57.20:2821,57,0	1/1:8,15:23:39.13:1935,39,0	0/0:38,0:38:99:0,114,8501	1/1:1,21:22:39.13:1936,39,0	1/1:2,23:25:66.20:2665,66,0	1/1:6,21:28:39.13:1927,39,0	1/1:1,10:11:27.09:1340,27,0	1/1:8,20:28:54.19:2676,54,0	1/1:2,27:29:60.21:2978,60,0	0/0:31,0:31:93.32:0,93,7423	0/0:21,0:21:63.22:0,63,4919	0/0:19,0:19:57.20:0,57,4089	0/0:8,0:8:24.08:0,24,1710	0/0:27,0:27:78.27:0,78,5521	0/0:14,0:14:39.13:0,39,2980	0/0:37,0:37:99:0,111,8506	1/1:3,12:15:30.10:1489,30,0	1/1:4,18:23:51.18:2530,51,0	1/1:5,5:10:12.04:596,12,0	1/1:7,17:24:42.14:2085,42,0	0/1:25,2:27:99:210,0,5729	0/0:42,0:41:99:0,120,9358	0/0:13,0:13:36.12:0,36,2890
chr10	23345122	.	TC	T	218.34	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=1.064;DP=451;FS=11.683;HRun=2;HaplotypeScore=72.6495;InbreedingCoeff=0.9372;MQ=75.58;MQ0=0;MQRankSum=-1.314;QD=24.26;ReadPosRankSum=0.146;VQSLOD=2.1683;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,9:9:24.08:312,24,0	0/0:10,0:10:30.10:0,30,449	0/0:11,0:11:33.11:0,33,481	0/0:6,0:6:18.06:0,18,269	0/0:27,0:27:81.26:0,81,1195	0/0:17,0:17:51.16:0,51,746	0/0:7,0:7:21.07:0,21,315	0/0:20,0:20:60.20:0,60,881	0/0:11,0:11:33.10:0,33,476	0/0:19,0:19:57.18:0,57,836	0/0:29,0:29:87.28:0,87,1284	0/0:13,0:13:39.13:0,39,585	0/0:23,0:23:69.23:0,69,1034	0/0:8,0:8:24.08:0,24,359	0/0:8,0:8:24.08:0,24,360	0/0:17,0:17:51.16:0,51,744	0/0:23,0:23:60.18:0,60,875	0/0:21,0:21:63.21:0,63,943	0/0:19,0:19:54.17:0,54,791	0/0:28,0:28:84.28:0,84,1259	0/0:4,0:4:12.04:0,12,180	0/0:5,0:5:15.05:0,15,225	0/0:18,0:18:54.18:0,54,809	0/0:9,0:9:27.09:0,27,403	0/0:19,0:19:57.19:0,57,854	0/0:26,0:26:75.22:0,75,1084	0/0:27,0:27:81.27:0,81,1211	0/0:17,0:17:48.16:0,48,719
chr10	23345449	.	C	CT	366.95	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-2.336;DP=560;FS=0.000;HRun=3;HaplotypeScore=51.0432;InbreedingCoeff=0.9751;MQ=75.13;MQ0=0;MQRankSum=-1.651;QD=28.23;ReadPosRankSum=1.112;VQSLOD=2.7214;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,12:13:33.11:462,33,0	0/0:7,0:7:21.06:0,21,252	0/0:13,0:13:36.04:0,36,402	0/0:8,0:8:18.05:0,18,215	0/0:26,0:26:75.21:0,75,887	0/0:23,0:23:69.21:0,69,828	0/0:11,0:11:30.09:0,30,360	0/0:29,0:29:72.20:0,72,846	0/0:19,0:19:57.17:0,57,684	0/0:23,0:23:63.19:0,63,754	0/0:29,0:29:84.26:0,84,1008	0/0:23,0:23:66.20:0,66,792	0/0:28,0:28:81.25:0,81,970	0/0:21,0:21:60.15:0,60,695	0/0:27,0:27:78.21:0,78,913	0/0:24,0:24:69.21:0,69,828	0/0:24,0:24:60.11:0,60,689	0/0:21,0:21:57.14:0,57,656	0/0:17,0:17:45.12:0,45,519	0/0:19,0:19:54.16:0,54,643	0/0:17,0:17:48.15:0,48,576	0/0:10,0:10:30.09:0,30,360	0/0:17,0:17:45.14:0,45,540	0/0:8,0:8:21.06:0,21,252	0/0:26,0:26:78.23:0,78,926	0/0:28,1:29:42.22:0,42,919	0/0:41,0:40:99:0,123,1463	0/0:7,0:7:18.06:0,18,216
chr10	23347208	.	A	ATCAT	31149.63	PASS	AB=0.935;AC=41;AF=0.732;AN=56;BaseQRankSum=-15.105;DP=755;FS=0.000;HRun=0;HaplotypeScore=110.2449;InbreedingCoeff=0.9037;MQ=84.10;MQ0=8;MQRankSum=-5.635;QD=55.92;ReadPosRankSum=3.920;VQSLOD=6.2397;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,26:30:63.22:1661,63,0	1/1:1,13:15:33.11:871,33,0	0/0:30,0:30:78.23:0,78,1340	0/0:20,0:21:44.84:0,45,954	1/1:8,23:32:63.13:1530,63,0	1/1:9,20:31:69.24:1792,69,0	1/1:3,19:21:51.18:1345,51,0	0/0:36,0:36:93.29:0,93,1640	1/1:2,30:33:75.26:1975,75,0	1/1:5,24:30:78.27:1986,78,0	1/1:2,18:19:48.16:1234,48,0	1/1:5,16:21:42.14:1109,42,0	1/1:2,24:27:66.23:1741,66,0	1/1:7,25:33:81.28:2134,81,0	0/0:34,0:34:96.33:0,96,1754	0/0:34,0:34:96.32:0,96,1726	1/1:8,17:26:39.13:996,39,0	1/1:2,6:8:12.04:316,12,0	1/1:8,18:29:72.21:1768,72,0	1/1:5,32:37:99:2582,99,0	1/1:2,26:30:72.25:1897,72,0	1/1:5,17:22:54.19:1423,54,0	1/1:2,22:24:57.20:1499,57,0	1/1:4,18:22:51.18:1335,51,0	1/1:5,26:30:72.25:1898,72,0	0/1:27,1:29:58.45:58,0,1290	0/0:31,0:31:81.23:0,81,1455	0/0:12,0:12:36.12:0,36,648
chr10	23348459	.	GA	G	6131.12	PASS	AB=1.000;AC=35;AF=0.625;AN=56;BaseQRankSum=11.010;DP=426;FS=0.396;HRun=7;HaplotypeScore=44.3464;InbreedingCoeff=0.9127;MQ=81.02;MQ0=1;MQRankSum=0.233;QD=23.86;ReadPosRankSum=2.790;VQSLOD=4.7866;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,19:22:51.12:520,51,0	1/1:1,3:4:9.02:92,9,0	0/0:21,1:15:1.36:0,1,110	0/1:10,0:11:0.21:0,0,87	1/1:0,21:21:60.05:598,60,0	1/1:0,9:9:27.06:275,27,0	1/1:0,7:7:15.03:153,15,0	0/0:22,0:22:57.13:0,57,639	1/1:2,5:7:15.03:153,15,0	1/1:1,25:26:75.15:757,75,0	1/1:1,10:11:26.97:261,27,0	1/1:2,17:19:51.12:520,51,0	1/1:3,16:19:39.08:398,39,0	1/1:0,12:12:27.06:275,27,0	1/1:3,16:19:39.09:398,39,0	1/1:2,11:13:21.04:214,21,0	0/0:15,0:15:42.13:0,42,528	0/0:9,0:9:24.03:0,24,283	0/0:9,0:9:27.08:0,27,328	0/0:32,0:32:87.25:0,87,1067	0/0:8,0:8:24.06:0,24,287	1/1:1,15:16:45.02:445,45,0	1/1:1,16:17:48.11:490,48,0	1/1:0,6:6:18.04:184,18,0	1/1:2,15:17:39.09:398,39,0	0/0:22,1:23:29.58:0,30,686	0/0:21,0:21:57.11:0,57,662	0/0:8,0:8:24.05:0,24,274
chr10	23348939	.	CTGTGGAG	C	6946.82	PASS	AB=0.831;AC=19;AF=0.339;AN=56;BaseQRankSum=5.274;DP=724;FS=1.207;HRun=0;HaplotypeScore=410.2007;InbreedingCoeff=-0.2306;MQ=67.10;MQ0=0;MQRankSum=-10.909;QD=14.41;ReadPosRankSum=-2.521;VQSLOD=2.2638;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:14,1:15:7.70:60,0,8	0/1:9,4:13:25.09:250,0,25	0/0:20,0:20:60.21:0,60,2343	0/0:18,0:18:51.18:0,51,2041	0/1:28,8:36:66.02:439,0,66	0/1:28,4:32:47.65:238,0,48	0/1:14,2:16:9.15:149,0,9	0/0:33,0:33:96.31:0,96,3573	0/1:19,2:21:42.58:139,0,43	0/1:20,8:28:99:517,0,163	0/1:29,10:39:87.31:613,0,87	0/1:22,8:30:56.54:491,0,57	0/1:26,12:39:48.19:797,0,48	0/1:23,12:35:73:732,0,73	0/1:33,6:39:99:371,0,123	0/1:31,4:34:43.95:246,0,44	0/0:17,0:17:51.18:0,51,2057	0/0:9,0:9:23.92:0,24,982	0/0:18,0:18:51.18:0,51,2064	0/0:28,0:28:84.29:0,84,3383	0/0:17,0:17:48.16:0,48,1939	0/1:21,3:24:58.17:224,0,58	1/1:19,6:25:9.05:448,9,0	1/1:8,5:13:0.70:276,1,0	0/1:27,15:42:26.09:957,0,26	0/0:43,0:43:99:0,128,4895	0/0:33,0:33:99:0,99,3908	0/0:6,0:6:18.06:0,18,738
chr10	23348941	.	G	GCA	8561.89	PASS	AB=0.658;AC=17;AF=0.304;AN=56;BaseQRankSum=16.625;DP=517;FS=5.284;HRun=0;HaplotypeScore=316.0568;InbreedingCoeff=-0.3536;MQ=77.53;MQ0=0;MQRankSum=-13.529;QD=30.69;ReadPosRankSum=6.321;VQSLOD=4.2654;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:2,2:4:16.15:108,0,16	0/1:4,3:7:35.19:160,0,35	0/0:21,0:21:57.19:0,57,917	0/0:18,0:18:51.17:0,51,832	0/1:8,14:22:24.55:781,0,25	0/1:5,8:13:17.12:470,0,17	0/1:3,4:7:32.99:219,0,33	0/0:29,0:29:87.30:0,87,1417	0/1:3,6:9:26.88:335,0,27	0/1:8,5:13:75.84:265,0,76	0/1:13,11:24:64.24:665,0,64	0/1:10,11:21:52.55:630,0,53	0/1:16,9:25:95:563,0,95	0/1:13,14:27:88.14:784,0,88	0/1:7,18:26:6.44:1088,0,6	0/1:4,14:17:2.69:787,0,3	0/0:17,0:17:51.17:0,51,814	0/0:10,0:10:24.08:0,24,391	0/0:17,0:17:51.17:0,51,829	0/0:28,0:28:84.29:0,84,1361	0/0:17,0:17:48.16:0,48,783	0/1:3,8:11:11.82:389,0,12	0/1:6,5:12:51.91:266,0,52	0/1:6,2:8:24.54:151,0,25	0/1:16,16:32:99:902,0,115	0/0:42,1:43:62.84:0,63,1873	0/0:32,0:32:96.33:0,96,1563	0/0:6,0:6:18.06:0,18,294
chr10	23348951	.	A	ATTTTT	13012.79	PASS	AB=0.667;AC=33;AF=0.589;AN=56;BaseQRankSum=19.042;DP=526;FS=1.424;HRun=1;HaplotypeScore=324.3482;InbreedingCoeff=0.9471;MQ=81.53;MQ0=0;MQRankSum=-19.328;QD=48.74;ReadPosRankSum=9.968;VQSLOD=1.9708;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:2,2:4:1.72:156,0,2	1/1:4,3:7:17.55:270,18,0	0/0:25,0:25:72.23:0,72,1441	0/0:18,0:18:50.76:0,51,1029	1/1:8,14:22:59.11:1278,59,0	1/1:4,8:12:30.66:672,31,0	1/1:2,4:6:16.30:338,16,0	0/0:32,0:32:96.32:0,96,1984	1/1:3,6:9:18.10:491,18,0	1/1:8,5:13:16.83:414,17,0	1/1:10,10:21:55.24:999,55,0	1/1:8,11:19:48.17:942,48,0	1/1:13,9:22:49.74:822,50,0	1/1:13,12:26:66.64:1225,67,0	1/1:6,19:25:68:1583,68,0	1/1:5,14:18:46.33:1156,46,0	0/0:19,0:19:54:0,54,1126	0/0:11,0:11:30.04:0,30,605	0/0:21,0:21:63.20:0,63,1264	0/0:31,0:31:90.29:0,90,1906	0/0:17,0:17:48.16:0,48,1000	1/1:3,8:11:21.31:581,21,0	1/1:7,5:12:28.52:458,29,0	1/1:6,2:8:15.11:240,15,0	1/1:15,16:31:76.93:1388,77,0	0/0:38,1:39:37.66:0,38,2301	0/0:34,0:34:99:0,102,2125	0/0:12,0:12:36.12:0,36,768
chr10	23348952	.	TGTA	T	10629.98	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=19.789;DP=529;FS=5.919;HRun=0;HaplotypeScore=315.3486;InbreedingCoeff=0.9929;MQ=80.69;MQ0=0;MQRankSum=-19.284;QD=39.66;ReadPosRankSum=9.888;VQSLOD=4.1474;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:3,1:4:12.02:157,12,0	1/1:3,4:7:21.05:308,21,0	0/0:24,0:24:72.23:0,72,1646	0/0:18,0:18:54.17:0,54,1264	1/1:14,8:22:63.10:771,63,0	1/1:9,4:13:39.05:473,39,0	1/1:4,2:6:18.04:234,18,0	0/0:33,0:33:99:0,99,2388	1/1:7,2:9:27.06:339,27,0	1/1:5,8:13:39.11:598,39,0	1/1:11,10:21:63.14:868,63,0	1/1:11,8:19:57.12:758,57,0	1/1:9,13:22:66.16:975,66,0	1/1:14,12:26:78.17:1077,78,0	1/1:19,6:25:75.04:857,75,0	1/1:15,4:18:57.11:673,57,0	0/0:19,0:19:54.17:0,54,1280	0/0:11,0:11:30.10:0,30,734	0/0:22,0:22:66.21:0,66,1486	0/0:31,0:31:93.30:0,93,2230	0/0:17,0:17:48.16:0,48,1179	1/1:8,3:11:33.07:421,33,0	1/1:6,6:12:36.02:539,36,0	1/1:3,5:8:21.02:293,21,0	1/1:16,15:31:93.21:1290,93,0	0/0:40,0:40:91.12:0,91,2752	0/0:34,0:34:99:0,102,2412	0/0:12,0:12:36.12:0,36,885
chr10	23348955	.	A	ATCAT	19768.06	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=20.685;DP=624;FS=4.432;HRun=0;HaplotypeScore=356.3135;InbreedingCoeff=0.9992;MQ=76.36;MQ0=0;MQRankSum=-19.808;QD=53.86;ReadPosRankSum=5.873;VQSLOD=4.1034;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,2:11:27.05:518,27,0	1/1:8,3:11:30.10:546,30,0	0/0:25,0:25:69.24:0,69,1288	0/0:18,0:18:54.15:0,54,1010	1/1:12,14:26:66.22:1341,66,0	1/1:15,8:23:66.07:1232,66,0	1/1:4,4:8:24.04:415,24,0	0/0:33,0:33:99:0,99,1906	1/1:9,6:15:36.12:802,36,0	1/1:15,5:20:57.19:1066,57,0	1/1:13,11:24:72.22:1288,72,0	1/1:18,11:29:87.29:1738,87,0	1/1:22,9:31:87.23:1427,87,0	1/1:19,13:32:96.26:1745,96,0	1/1:11,19:30:90.25:1823,90,0	1/1:13,14:26:78.26:1687,78,0	0/0:18,0:18:51.12:0,51,986	0/0:11,0:11:30.10:0,30,597	0/0:19,0:19:54.18:0,54,1078	0/0:30,0:30:90.31:0,90,1781	0/0:17,0:17:48.15:0,48,906	1/1:7,8:15:45.13:903,45,0	1/1:10,5:15:42.12:736,42,0	1/1:8,2:10:27.05:470,27,0	1/1:24,16:40:99:2030,108,0	0/0:39,1:40:44.68:0,45,2128	0/0:32,0:32:96.33:0,96,1917	0/0:14,0:14:42.09:0,42,746
chr10	23350064	.	GA	G	647.49	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.505;DP=472;FS=10.103;HRun=9;HaplotypeScore=51.5194;InbreedingCoeff=0.8548;MQ=82.81;MQ0=0;MQRankSum=-2.482;QD=17.99;ReadPosRankSum=2.350;VQSLOD=3.3215;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:30.07:0,30,327	0/0:8,0:8:18.05:0,18,208	0/0:23,0:21:31.85:0,32,458	0/0:23,0:22:3.80:0,4,216	0/0:22,0:22:60.18:0,60,692	0/0:15,0:15:36.09:0,36,399	0/0:6,0:6:12.04:0,12,138	0/0:22,1:23:23.68:0,24,519	0/0:7,0:7:21.06:0,21,242	0/0:22,0:22:57.15:0,57,641	0/0:15,0:15:45.09:0,45,505	0/0:10,0:10:30.09:0,30,346	0/0:22,0:22:54.15:0,54,614	0/0:13,0:13:33.10:0,33,381	1/1:3,19:22:54.02:494,54,0	1/1:4,10:14:30.01:274,30,0	0/0:19,0:19:57.16:0,57,648	0/0:10,1:11:5.64:0,6,319	0/0:20,0:20:51.10:0,51,564	0/0:24,0:24:63.16:0,63,709	0/0:7,0:7:21.06:0,21,242	0/0:13,0:13:39.07:0,39,422	0/0:18,0:18:51.13:0,51,569	0/0:18,0:18:45.11:0,45,499	0/0:16,1:17:22.90:0,23,492	0/0:25,0:25:66.17:0,66,738	0/0:34,2:35:62.79:0,63,962	0/0:9,0:9:27.08:0,27,309
chr10	23351103	.	AC	A	3585.54	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=13.243;DP=696;FS=1.356;HRun=1;HaplotypeScore=72.0210;InbreedingCoeff=0.9889;MQ=86.76;MQ0=0;MQRankSum=-1.669;QD=37.74;ReadPosRankSum=4.174;VQSLOD=4.2172;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,35:35:90.26:1236,90,0	0/0:10,0:10:30.10:0,30,479	0/0:25,0:25:75.21:0,75,1115	0/0:21,0:21:60.15:0,60,895	0/0:33,0:33:96.31:0,96,1506	0/0:30,0:30:90.24:0,90,1338	0/0:33,0:33:99:0,99,1556	0/0:27,0:27:81.27:0,81,1274	0/0:23,0:23:66.21:0,66,1031	0/0:22,0:22:66.18:0,66,1026	0/0:15,0:15:45.15:0,45,717	0/0:28,0:28:84.29:0,84,1335	0/0:27,0:27:76.26:0,76,1215	0/0:27,0:27:81.25:0,81,1246	1/1:0,35:35:96.32:1343,96,0	1/1:0,25:25:72.24:1007,72,0	0/0:23,0:23:69.21:0,69,1077	0/0:16,0:16:45.10:0,45,667	0/0:18,0:18:54.16:0,54,813	0/0:30,0:30:90.28:0,90,1389	0/0:30,0:30:90.29:0,90,1390	0/0:17,0:17:51.07:0,51,760	0/0:19,0:19:57.19:0,57,903	0/0:29,0:29:87.26:0,87,1334	0/0:30,0:30:90.29:0,90,1415	0/0:28,0:28:84.29:0,84,1338	0/0:36,0:36:99:0,108,1693	0/0:4,0:4:12.02:0,12,168
chr10	23352563	.	G	GA	1162.22	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-8.885;DP=585;FS=6.376;HRun=6;HaplotypeScore=53.2652;InbreedingCoeff=0.8853;MQ=70.81;MQ0=1;MQRankSum=-2.432;QD=27.03;ReadPosRankSum=0.075;VQSLOD=3.8426;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:96.21:0,96,979	0/0:8,0:8:24.05:0,24,245	0/0:10,0:10:27.04:0,27,262	0/0:9,0:9:0.65:0,1,178	0/0:26,0:25:69.13:0,69,695	0/0:24,0:24:63.14:0,63,642	0/0:28,0:28:69.10:0,69,682	0/0:35,0:35:90.19:0,90,913	0/0:18,0:18:51.11:0,51,519	0/0:17,0:17:42.09:0,42,428	0/0:17,0:17:51.09:0,51,512	0/0:23,0:23:66.13:0,66,662	0/0:25,0:25:75.16:0,75,758	0/0:18,0:18:48.09:0,48,483	1/1:2,14:16:36.12:453,36,0	1/1:2,25:26:66.21:830,66,0	0/0:27,0:27:78.18:0,78,795	0/0:25,0:25:69.15:0,69,703	0/0:18,0:18:51.11:0,51,520	0/0:28,0:28:78.15:0,78,788	0/0:10,0:10:30.05:0,30,299	0/0:16,0:16:45.09:0,45,452	0/0:18,0:18:54.09:0,54,537	0/0:19,0:19:51.07:0,51,506	0/0:30,0:30:78.15:0,78,787	0/0:26,0:26:72.16:0,72,735	0/0:22,0:22:60.14:0,60,612	0/0:9,0:9:27.06:0,27,275
chr10	23352664	.	AT	A	5285.09	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=5.180;DP=467;FS=7.649;HRun=9;HaplotypeScore=59.8229;InbreedingCoeff=0.9038;MQ=66.98;MQ0=0;MQRankSum=1.210;QD=20.25;ReadPosRankSum=1.977;VQSLOD=5.3208;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:25.85:0,26,136	1/1:1,8:9:24.01:219,24,0	0/0:7,0:5:5.98:0,6,52	0/1:9,0:6:19.82:20,0,29	1/1:2,21:23:54.01:492,54,0	1/1:2,20:22:51.01:467,51,0	1/1:2,15:17:45.02:412,45,0	0/0:33,0:33:81.23:0,81,926	1/1:1,23:24:51.03:467,51,0	1/1:5,16:21:48.02:439,48,0	1/1:4,13:17:42.01:381,42,0	1/1:2,15:17:39.01:357,39,0	1/1:1,19:20:42.02:384,42,0	1/1:1,22:23:54.02:494,54,0	0/0:11,0:11:25.59:0,26,129	0/0:18,0:18:33.46:0,33,172	0/0:21,0:21:57.17:0,57,657	0/0:12,0:12:33.08:0,33,370	0/0:19,0:20:50.96:0,51,548	0/0:19,0:19:54.15:0,54,614	0/0:4,0:4:12.04:0,12,138	1/1:3,8:11:18:165,18,0	1/1:1,17:18:42.40:384,42,0	1/1:0,10:10:30.02:275,30,0	1/1:1,19:20:36.02:329,36,0	0/0:16,1:18:20.52:0,21,456	0/0:25,1:26:38.71:0,39,688	0/0:6,0:6:12.04:0,12,138
chr10	23352695	.	G	GA	212.02	PASS	AB=0.957;AC=4;AF=0.071;AN=56;BaseQRankSum=1.817;DP=474;FS=0.000;HRun=9;HaplotypeScore=83.3130;InbreedingCoeff=0.4119;MQ=74.10;MQ0=1;MQRankSum=-1.261;QD=4.33;ReadPosRankSum=-1.618;VQSLOD=0.1425;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,9:10:27.07:296,27,0	0/0:6,0:6:8.98:0,9,78	0/0:20,0:14:17.88:0,18,149	0/1:18,0:11:13.18:13,0,33	0/0:21,0:21:28.37:0,28,463	0/0:18,0:18:30.30:0,30,396	0/0:16,0:16:41.99:0,42,365	0/0:35,0:35:77.93:0,78,674	0/0:19,0:19:44.98:0,45,391	0/0:17,0:17:47.99:0,48,417	0/0:18,0:18:41.96:0,42,360	0/0:14,0:14:41.99:0,42,365	0/1:19,2:21:15.33:15,0,340	0/0:21,0:22:59.02:0,59,501	0/0:12,0:12:32.99:0,33,286	0/0:16,0:16:47.99:0,48,417	0/0:19,0:19:50.99:0,51,443	0/0:16,0:16:41.99:0,42,364	0/0:28,0:28:71.97:0,72,621	0/0:22,0:22:47.98:0,48,417	0/0:4,0:4:12:0,12,104	0/0:10,0:10:29.99:0,30,260	0/0:18,0:18:41.60:0,42,360	0/0:10,0:10:23.97:0,24,203	0/0:18,1:19:23.58:0,24,354	0/0:19,0:19:44.94:0,45,384	0/0:22,0:22:62.98:0,63,546	0/0:3,0:4:5.02:0,5,32
chr10	23354340	.	GAA	G	11789.39	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=12.979;DP=510;FS=8.062;HRun=9;HaplotypeScore=107.5778;InbreedingCoeff=0.9739;MQ=73.57;MQ0=1;MQRankSum=-2.474;QD=29.62;ReadPosRankSum=2.043;VQSLOD=4.3712;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,17:19:51.15:594,51,0	1/1:1,11:12:33.09:384,33,0	0/0:11,0:12:26.58:0,27,385	0/0:11,0:10:18.06:0,18,316	1/1:1,23:24:63.18:733,63,0	1/1:3,21:24:54.15:629,54,0	1/1:1,13:14:33.09:385,33,0	1/1:5,28:33:84.21:955,84,0	1/1:1,10:10:24.07:280,24,0	1/1:2,18:20:54.16:629,54,0	1/1:0,21:21:63.19:734,63,0	1/1:3,20:23:57.16:664,57,0	1/1:0,14:14:42.12:489,42,0	1/1:2,20:22:57.16:664,57,0	1/1:6,13:19:36.09:420,36,0	1/1:2,17:19:45.13:524,45,0	0/0:18,0:18:45.15:0,45,737	0/0:16,0:16:45.15:0,45,734	0/0:15,0:15:36.12:0,36,589	0/0:32,0:32:90.31:0,90,1472	0/0:8,0:8:18.06:0,18,295	1/1:1,7:8:21.06:244,21,0	1/1:2,14:16:42.12:489,42,0	1/1:0,6:6:15.04:175,15,0	1/1:1,33:34:96.29:1118,96,0	1/1:2,18:20:51.14:594,51,0	1/1:5,31:36:87.25:1014,87,0	1/1:0,3:3:6.02:70,6,0
chr10	23355703	.	T	TAGATTTCCGAAGCTTCCATG	13812.02	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-4.995;DP=690;FS=3.985;HRun=0;HaplotypeScore=365.9980;InbreedingCoeff=0.9992;MQ=72.97;MQ0=0;MQRankSum=-12.209;QD=222.77;ReadPosRankSum=1.699;VQSLOD=4.1703;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,123,6334	0/0:16,0:16:48.15:0,48,2459	0/0:15,0:15:39.13:0,39,1411	0/0:12,0:12:30.09:0,30,1282	0/0:29,0:29:87.30:0,87,4476	0/0:24,0:24:69.21:0,69,3001	0/0:22,0:22:66.20:0,66,3214	0/0:36,0:36:99:0,108,5157	0/0:19,0:19:54.19:0,54,2821	0/0:27,0:27:81.26:0,81,3978	0/0:23,0:23:69.22:0,69,3435	0/0:18,0:18:51.17:0,51,2550	0/0:24,0:24:69.22:0,69,3612	0/0:29,0:29:84.29:0,84,4615	1/1:17,9:29:75.26:6146,75,0	1/1:19,12:33:93.32:7666,93,0	0/0:27,0:27:81.28:0,81,3994	0/0:23,0:23:63.19:0,63,3094	0/0:18,0:18:54.19:0,54,2447	0/0:26,0:26:78.27:0,78,3917	0/0:29,0:29:87.28:0,87,4297	0/0:22,0:22:66.23:0,66,3368	0/0:24,0:24:72.25:0,72,4005	0/0:21,0:21:63.22:0,63,3529	0/0:27,0:27:81.25:0,81,4475	0/0:31,0:31:93.32:0,93,5072	0/0:36,0:36:99:0,108,5688	0/0:9,0:9:27.09:0,27,1535
chr10	23356905	.	TC	T	1450.46	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=1.026;DP=567;FS=10.862;HRun=1;HaplotypeScore=86.2998;InbreedingCoeff=0.7569;MQ=71.98;MQ0=3;MQRankSum=-1.515;QD=23.02;ReadPosRankSum=-0.081;VQSLOD=2.4919;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:17:44.07:0,44,269	0/0:12,0:12:13.99:0,14,64	0/0:15,0:13:34.80:0,35,306	0/1:11,0:10:11.91:12,0,148	0/0:28,0:28:81.06:0,81,975	0/0:26,0:26:75.18:0,75,1039	0/0:14,0:14:37.78:0,38,439	0/0:33,0:33:91.34:0,91,658	0/0:16,0:16:39.09:0,39,519	0/0:32,0:32:55.36:0,55,410	0/0:18,0:18:28.05:0,28,227	0/0:18,0:18:43.32:0,43,537	0/0:29,0:29:72.02:0,72,877	0/0:19,0:19:42.07:0,42,521	1/1:9,15:25:70.49:825,70,0	1/1:12,14:27:63.71:741,64,0	0/0:17,0:16:27.02:0,27,263	0/0:11,0:11:25.62:0,26,196	0/0:11,0:11:30.04:0,30,304	0/0:27,0:27:68.12:0,68,636	0/0:7,0:7:15.02:0,15,145	0/0:19,0:19:35.73:0,36,549	0/0:28,0:28:74.60:0,75,922	0/0:16,0:16:48.07:0,48,582	0/0:26,0:26:71.57:0,72,952	0/0:27,0:27:74.54:0,75,518	0/0:32,0:34:53.21:0,53,388	0/0:3,0:3:8.79:0,9,51
chr10	23356906	.	CAA	C	2225.73	PASS	AB=0.621;AC=11;AF=0.196;AN=56;BaseQRankSum=5.208;DP=595;FS=11.100;HRun=13;HaplotypeScore=92.4371;InbreedingCoeff=0.8937;MQ=70.54;MQ0=3;MQRankSum=0.873;QD=16.99;ReadPosRankSum=3.552;VQSLOD=1.8408;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,13:17:35.78:332,36,0	0/0:1,0:12:24.95:0,25,86	0/0:17,0:15:24.41:0,24,289	0/0:11,0:9:9.12:0,9,81	0/0:29,0:32:72.16:0,72,909	0/0:22,0:25:63.20:0,63,883	0/0:12,0:15:35.04:0,35,412	1/1:9,23:32:66:633,66,0	0/0:16,0:16:42.02:0,42,562	0/0:12,0:32:44.72:0,45,164	0/1:7,1:18:2.20:2,0,83	0/0:16,0:18:38.60:0,39,493	0/0:29,1:30:43.09:0,43,894	0/0:21,0:21:54.02:0,54,675	0/0:25,0:25:29.78:0,30,290	0/0:28,0:28:38.90:0,39,425	0/0:0,0:15:24.04:0,24,229	0/0:5,0:11:25.16:0,25,208	0/0:10,0:16:38.99:0,39,380	0/0:9,0:37:89.89:0,90,936	0/0:3,0:8:12.02:0,12,129	0/0:17,0:20:47.09:0,47,555	0/0:27,0:28:67.22:0,67,831	0/0:17,0:17:42.11:0,42,568	0/0:28,0:29:49.10:0,49,965	1/1:3,22:26:65.78:616,66,0	1/1:5,29:34:75.10:727,75,0	1/1:0,3:3:9.01:87,9,0
chr10	23357392	.	A	ATT	5706.97	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=9.601;DP=543;FS=7.217;HRun=7;HaplotypeScore=99.9637;InbreedingCoeff=0.9764;MQ=71.59;MQ0=0;MQRankSum=-0.416;QD=13.75;ReadPosRankSum=1.128;VQSLOD=1.7941;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,0:18:34.81:123,35,0	1/1:1,0:11:22.46:79,22,0	0/0:18,0:18:25.74:0,26,293	0/0:12,0:12:27.05:0,27,300	1/1:1,1:25:23.46:199,23,0	1/1:3,0:18:34.93:123,35,0	1/1:2,0:14:15.73:76,16,0	1/1:6,27:34:81.24:1257,81,0	1/1:2,0:14:29.94:105,30,0	1/1:3,0:22:47.71:171,48,0	1/1:1,0:21:44.92:158,45,0	1/1:2,0:18:39.93:141,40,0	1/1:5,0:25:41.67:148,42,0	1/1:3,0:27:52.28:184,52,0	1/1:0,0:25:52.40:185,52,0	1/1:0,0:21:47.41:167,47,0	0/0:17,0:17:48.12:0,48,547	0/0:14,0:14:42.12:0,42,489	0/0:21,0:21:60.17:0,60,691	0/0:33,0:33:87.24:0,87,1013	0/0:13,0:13:36.11:0,36,420	1/1:3,0:18:37.43:132,37,0	1/1:1,0:10:22.46:79,22,0	1/1:0,0:12:27.45:97,27,0	1/1:2,0:23:47.41:167,47,0	1/1:2,21:23:63.22:1033,63,0	1/1:3,24:28:60.20:984,60,0	1/1:2,6:8:6.02:98,6,0
chr10	23359079	.	CTA	C	9633.49	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=10.969;DP=455;FS=0.407;HRun=0;HaplotypeScore=55.6646;InbreedingCoeff=0.9586;MQ=70.93;MQ0=2;MQRankSum=1.506;QD=30.68;ReadPosRankSum=2.125;VQSLOD=6.1660;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:39.13:0,39,660	1/1:1,6:7:18.06:237,18,0	0/0:6,0:6:6.02:0,6,103	0/0:6,0:6:15.03:0,15,227	1/1:4,22:26:57.14:730,57,0	1/1:4,17:21:45.15:592,45,0	1/1:0,6:6:15.05:197,15,0	1/1:7,24:31:72.21:917,72,0	1/1:1,8:9:21.07:276,21,0	1/1:4,22:25:63.20:828,63,0	1/1:0,18:18:54.18:710,54,0	1/1:1,22:23:57.19:749,57,0	1/1:1,21:22:63.20:828,63,0	1/1:1,19:20:45.15:592,45,0	0/0:18,0:18:54.17:0,54,896	0/0:13,0:13:36.12:0,36,614	0/0:17,0:17:30.10:0,30,505	0/0:15,0:15:39.13:0,39,630	0/0:22,0:22:48.16:0,48,823	0/0:27,0:27:69.24:0,69,1180	0/0:4,0:4:12.04:0,12,206	1/1:2,8:10:12.04:158,12,0	1/1:4,10:14:26.75:355,27,0	1/1:0,7:7:18.06:237,18,0	1/1:1,19:19:45.15:592,45,0	1/1:2,19:21:57.17:732,57,0	1/1:6,21:27:60.20:789,60,0	1/1:3,3:6:9.03:118,9,0
chr10	23359867	.	CATATATATATATATATATATATATATATATATATAT	C	1054.89	PASS	AC=8;AF=0.235;AN=34;BaseQRankSum=1.524;DP=184;FS=5.032;HRun=0;HaplotypeScore=148.9802;InbreedingCoeff=0.4792;MQ=69.53;MQ0=4;MQRankSum=0.896;QD=24.53;ReadPosRankSum=1.389;VQSLOD=2.1641;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:6:3.01:0,3,53	./.	./.	0/0:20,0:10:10.57:0,11,130	./.	0/0:7,0:7:3.01:0,3,129	0/0:4,0:4:3.01:0,3,121	0/0:27,0:27:66.08:0,66,3430	./.	0/0:3,0:3:3.01:0,3,133	./.	./.	0/0:8,0:8:8.06:0,8,245	./.	0/0:3,0:3:9.01:0,9,273	./.	./.	1/1:10,0:9:9.01:206,9,0	1/1:4,4:9:15.05:680,15,0	1/1:7,4:12:3.01:186,3,0	1/1:12,0:12:6.02:96,6,0	./.	./.	0/0:2,0:2:1.25:0,1,3	0/0:9,0:9:3.01:0,3,170	0/0:3,0:3:3.01:0,3,217	0/0:5,0:5:0.47:0,0,1	0/0:2,0:1:3.01:0,3,291
chr10	23359873	.	T	TG	938.53	PASS	AB=0.585;AC=15;AF=0.417;AN=36;BaseQRankSum=1.040;DP=152;FS=11.817;HRun=0;HaplotypeScore=43.8877;InbreedingCoeff=0.4130;MQ=67.58;MQ0=5;MQRankSum=-0.899;QD=19.15;ReadPosRankSum=2.291;VQSLOD=4.8935;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:6:2.80:0,3,13	./.	0/0:6,0:5:6.02:0,6,80	0/0:18,0:8:5.71:0,6,38	0/0:0,2:4:0:0,0,0	1/1:0,3:7:3.01:46,3,0	1/1:0,2:2:3.01:44,3,0	0/1:7,17:24:96.05:682,0,96	./.	1/1:3,0:3:3.01:39,3,0	./.	./.	1/1:0,4:5:9.02:114,9,0	./.	0/0:3,0:3:9.03:0,9,124	./.	./.	0/0:11,0:9:11.97:0,12,141	0/0:9,0:9:26.24:0,26,309	0/0:10,0:10:2.68:0,3,11	0/0:10,0:10:6.02:0,6,81	./.	./.	./.	1/1:0,4:4:3.01:44,3,0	1/1:1,1:2:3.01:46,3,0	0/0:3,0:3:0:0,0,0	1/1:1,0:1:3.01:45,3,0
chr10	23361252	.	GGTCTGTGT	G	4183.92	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=10.864;DP=665;FS=2.513;HRun=0;HaplotypeScore=167.5803;InbreedingCoeff=0.9513;MQ=86.54;MQ0=0;MQRankSum=-10.290;QD=52.30;ReadPosRankSum=0.538;VQSLOD=3.1992;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:81.21:0,81,2894	0/0:18,0:18:51.16:0,51,2010	0/0:28,0:28:75.26:0,75,2983	0/0:18,0:18:42.14:0,42,1695	0/0:28,0:27:81.28:0,81,3520	0/0:24,0:24:66.21:0,66,2692	0/0:25,0:25:72.23:0,72,2930	0/0:34,0:34:87.28:0,87,3410	0/0:27,0:27:78.27:0,78,3397	0/0:36,0:36:96.33:0,96,4163	0/0:24,0:24:72.25:0,72,3163	0/0:23,0:23:54.19:0,54,2365	0/0:37,0:37:99:0,103,4400	0/0:27,0:27:81.26:0,81,3272	0/0:28,0:28:81.28:0,81,3447	0/0:29,0:29:81.28:0,81,3438	1/1:2,13:15:36.12:980,36,0	1/1:0,7:7:12.04:335,12,0	1/1:2,14:16:39.08:934,39,0	1/1:5,22:26:57.15:1479,57,0	1/1:4,11:15:18.04:455,18,0	0/0:25,0:25:72.25:0,72,3121	0/0:32,0:32:93.32:0,93,4036	0/0:14,0:14:42.14:0,42,1776	0/0:20,0:20:60.21:0,60,2559	0/0:23,0:23:69.24:0,69,3037	0/0:35,0:35:99:0,99,4341	0/0:1,0:1:3.01:0,3,132
chr10	23361490	.	GA	G	16943.32	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-6.448;DP=742;FS=19.630;HRun=7;HaplotypeScore=83.5856;InbreedingCoeff=0.9904;MQ=82.47;MQ0=3;MQRankSum=-9.007;QD=25.29;ReadPosRankSum=6.635;VQSLOD=3.2624;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,25:27:60.13:612,60,0	1/1:3,15:18:42.01:428,42,0	0/0:39,0:30:49.84:0,50,536	0/0:33,0:23:34.34:0,34,376	1/1:3,41:44:99:1147,114,0	1/1:4,31:35:72.16:734,72,0	1/1:3,26:29:60.13:611,60,0	1/1:1,34:35:99:1018,102,0	1/1:2,16:18:36.08:367,36,0	1/1:2,29:31:87.17:874,87,0	1/1:2,24:26:72.16:734,72,0	1/1:0,20:20:54.12:551,54,0	1/1:0,22:22:57.13:581,57,0	1/1:1,26:27:69.16:704,69,0	1/1:1,25:26:66.15:673,66,0	1/1:2,24:26:60.14:612,60,0	1/1:3,26:29:72.16:734,72,0	1/1:0,8:8:24.05:244,24,0	1/1:3,22:25:63.14:643,63,0	1/1:2,45:47:99:1241,123,0	1/1:0,15:15:36.08:367,36,0	1/1:0,29:29:84.19:855,84,0	1/1:6,26:32:69.15:703,69,0	1/1:1,12:13:33.08:337,33,0	1/1:5,22:27:60.13:612,60,0	1/1:2,20:22:60.13:611,60,0	1/1:0,33:33:78.18:796,78,0	1/1:1,5:6:15.03:153,15,0
chr10	23361871	.	C	CT	16986.67	PASS	AB=0.571;AC=51;AF=0.911;AN=56;BaseQRankSum=-7.025;DP=556;FS=9.332;HRun=6;HaplotypeScore=47.2557;InbreedingCoeff=0.7955;MQ=80.22;MQ0=0;MQRankSum=-7.110;QD=32.17;ReadPosRankSum=4.334;VQSLOD=4.6065;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,18:19:45.14:566,45,0	1/1:1,12:13:33.11:415,33,0	0/0:13,0:13:21.82:0,22,261	0/0:14,0:15:32.09:0,32,309	1/1:4,38:42:99:1317,108,0	1/1:2,29:31:84.27:1057,84,0	1/1:2,18:20:51.16:642,51,0	1/1:4,22:26:66.20:817,66,0	1/1:3,13:16:36.12:453,36,0	1/1:3,15:18:45.14:566,45,0	1/1:1,21:22:60.11:734,60,0	1/1:2,14:16:36.12:453,36,0	1/1:2,20:22:63.20:791,63,0	1/1:3,17:20:53.87:635,54,0	1/1:2,19:21:48.15:604,48,0	1/1:0,23:23:60.19:755,60,0	1/1:2,9:11:24.08:299,24,0	0/1:2,6:8:9.55:205,0,10	1/1:1,14:15:45.13:551,45,0	1/1:1,31:32:87.21:1075,87,0	1/1:1,10:11:30.10:377,30,0	1/1:2,16:18:48.15:604,48,0	1/1:0,18:18:48.15:604,48,0	1/1:2,12:14:30.10:377,30,0	1/1:1,15:16:45.14:566,45,0	1/1:2,22:24:66.21:831,66,0	1/1:2,33:35:93.30:1166,93,0	1/1:2,15:17:42.13:528,42,0
chr10	23362645	.	AG	A	3620.35	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=10.080;DP=669;FS=1.880;HRun=1;HaplotypeScore=64.8143;InbreedingCoeff=0.9862;MQ=90.11;MQ0=0;MQRankSum=-1.157;QD=38.51;ReadPosRankSum=2.772;VQSLOD=4.4077;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:48.16:0,48,765	0/0:11,0:11:33.11:0,33,525	0/0:21,0:21:61.73:0,62,806	0/0:30,0:31:79.06:0,79,1238	0/0:39,0:39:99:0,117,1811	0/0:28,0:28:84.27:0,84,1304	0/0:24,0:24:72.25:0,72,1148	0/0:32,0:32:96.32:0,96,1513	0/0:26,0:26:75.23:0,75,1160	0/0:29,0:29:87.28:0,87,1350	0/0:36,0:36:99:0,108,1697	0/0:22,0:22:66.21:0,66,1029	0/0:31,0:31:93.32:0,93,1482	0/0:19,0:19:57.19:0,57,910	0/0:32,0:31:93.30:0,93,1448	0/0:17,0:17:51.15:0,51,764	1/1:0,14:14:36.12:503,36,0	1/1:0,4:4:9.03:126,9,0	1/1:0,21:21:63.21:881,63,0	1/1:0,33:33:96.15:1273,96,0	1/1:0,22:22:60.20:838,60,0	0/0:26,0:26:78.20:0,78,1135	0/0:18,0:18:54.16:0,54,819	0/0:18,0:18:54.18:0,54,862	0/0:31,0:31:93.22:0,93,1404	0/0:29,0:29:87.25:0,87,1301	0/0:26,0:26:75.22:0,75,1131	0/0:12,0:12:36.12:0,36,574
chr10	23363598	.	G	GAC	8405.58	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-15.281;DP=504;FS=3.754;HRun=0;HaplotypeScore=60.5347;InbreedingCoeff=0.9535;MQ=71.05;MQ0=2;MQRankSum=-0.395;QD=37.69;ReadPosRankSum=3.853;VQSLOD=7.0157;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:42.59:0,43,516	1/1:1,11:12:24.08:399,24,0	0/0:15,0:14:38.19:0,38,428	0/0:19,0:18:24.95:0,25,354	1/1:4,27:31:66.22:1083,66,0	1/1:3,16:19:4.29:610,4,0	1/1:2,15:17:30.10:499,30,0	0/0:33,0:32:75.23:0,75,936	1/1:1,9:10:21.07:349,21,0	1/1:1,23:24:69.22:1120,69,0	1/1:1,23:24:28.37:1009,28,0	1/1:2,13:15:33.11:548,33,0	1/1:1,17:18:42.14:698,42,0	1/1:1,4:5:12.04:199,12,0	0/0:17,0:17:48.13:0,48,579	0/0:18,0:18:54.17:0,54,681	0/0:12,0:12:36.12:0,36,454	0/0:9,0:9:3.97:0,4,210	0/0:20,0:20:39.12:0,39,492	0/0:22,0:22:57.17:0,57,707	0/0:18,0:18:48.15:0,48,606	1/1:0,9:9:27.09:449,27,0	1/1:1,13:14:36.02:595,36,0	1/1:2,11:13:24.08:399,24,0	1/1:1,9:10:27.09:449,27,0	0/0:26,0:26:66.19:0,66,799	0/0:40,0:40:99:0,105,1269	0/0:9,0:9:20.94:0,21,235
chr10	23364844	.	GA	G	1373.40	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.916;DP=702;FS=9.344;HRun=1;HaplotypeScore=66.8411;InbreedingCoeff=0.9434;MQ=88.51;MQ0=0;MQRankSum=-4.600;QD=35.22;ReadPosRankSum=2.107;VQSLOD=3.4886;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,39:39:99:1468,105,0	0/0:9,0:9:27.09:0,27,430	0/0:25,0:25:75.23:0,75,1164	0/0:29,0:29:84.14:0,84,1212	0/0:27,0:27:81.25:0,81,1238	0/0:28,0:28:84.27:0,84,1319	0/0:33,0:33:99:0,99,1580	0/0:36,0:36:99:0,108,1723	0/0:10,0:10:27.09:0,27,430	0/0:25,0:25:75.26:0,75,1196	0/0:22,0:22:66.23:0,66,1055	0/0:23,0:23:69.24:0,69,1103	0/0:22,0:22:66.21:0,66,1031	0/0:27,0:27:81.28:0,81,1285	0/0:28,0:28:84.29:0,84,1336	0/0:37,0:37:99:0,108,1726	0/0:27,0:27:81.28:0,81,1291	0/0:13,0:13:39.13:0,39,622	0/0:17,0:17:48.15:0,48,744	0/0:31,0:31:93.30:0,93,1462	0/0:22,0:22:66.23:0,66,1055	0/0:34,0:34:99:0,102,1578	0/0:28,0:28:84.27:0,84,1309	0/0:32,0:32:96.33:0,96,1526	0/0:27,0:27:81.26:0,81,1270	0/0:26,0:26:78.27:0,78,1241	0/0:22,0:22:66.23:0,66,1055	0/0:3,0:3:9.03:0,9,144
chr10	23365424	.	AGAT	A	8976.85	PASS	AB=0.810;AC=39;AF=0.696;AN=56;BaseQRankSum=6.456;DP=591;FS=0.432;HRun=0;HaplotypeScore=116.1968;InbreedingCoeff=0.7481;MQ=77.47;MQ0=0;MQRankSum=-1.811;QD=21.63;ReadPosRankSum=4.298;VQSLOD=4.7718;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,16:25:33.08:441,33,0	1/1:1,6:7:18.06:252,18,0	0/1:30,0:27:4.48:4,0,437	0/0:33,0:32:26.05:0,26,445	1/1:13,16:29:57.19:794,57,0	1/1:3,15:18:48.12:649,48,0	1/1:9,13:22:24.08:336,24,0	0/0:38,0:38:45.15:0,45,900	1/1:3,12:15:36.12:499,36,0	1/1:13,14:27:51.17:713,51,0	1/1:16,5:21:21.02:266,21,0	1/1:3,21:24:63.21:877,63,0	1/1:13,17:29:69.23:957,69,0	1/1:14,16:30:54.18:755,54,0	0/0:21,0:21:42.14:0,42,840	0/0:27,1:28:12.21:0,12,971	0/1:10,0:12:15.25:15,0,21	0/1:2,0:8:19.07:31,0,19	1/1:1,0:10:14.88:105,15,0	1/1:4,0:23:38.61:264,39,0	1/1:4,0:17:8.92:61,9,0	1/1:8,14:22:45.14:613,45,0	1/1:4,11:15:36.12:503,36,0	1/1:2,6:8:15.05:210,15,0	1/1:7,15:22:45.15:630,45,0	0/0:21,0:22:57.20:0,57,1119	0/0:28,1:28:21.19:0,21,1094	0/0:5,0:4:12.04:0,12,230
chr10	23365436	.	TG	T	500.27	PASS	AB=0.917;AC=7;AF=0.125;AN=56;BaseQRankSum=6.512;DP=556;FS=3.598;HRun=1;HaplotypeScore=135.0718;InbreedingCoeff=0.4420;MQ=68.04;MQ0=0;MQRankSum=-6.652;QD=8.20;ReadPosRankSum=0.543;VQSLOD=0.9603;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:29.89:0,30,281	0/0:6,0:6:5.32:0,5,13	0/0:33,0:28:80.02:0,80,1138	0/0:27,0:26:67.55:0,68,959	0/0:28,0:28:44.63:0,45,392	0/0:20,0:20:22.30:0,22,143	0/0:21,0:21:23.99:0,24,271	0/0:37,0:37:99:0,111,1613	0/0:15,0:15:14.77:0,15,55	0/0:24,0:24:34.93:0,35,314	0/0:15,0:15:24.51:0,25,256	0/0:24,0:24:25.77:0,26,136	0/0:26,0:25:26.29:0,26,139	0/0:27,0:27:40.01:0,40,363	0/0:19,0:19:51.17:0,51,800	0/0:27,0:27:64.10:0,64,987	0/1:8,4:12:27.17:76,0,27	0/1:7,0:7:6.19:6,0,26	1/1:9,0:9:5.65:148,6,0	1/1:20,0:20:19.90:340,20,0	0/1:13,0:13:13.08:61,0,13	0/0:23,0:23:33.42:0,33,307	0/0:14,0:14:13.95:0,14,46	0/0:9,0:9:7.06:0,7,54	0/0:20,0:20:21.99:0,22,160	0/0:22,0:22:66.22:0,66,1024	0/0:30,0:29:79.15:0,79,1216	0/0:5,0:4:12.04:0,12,191
chr10	23365468	.	AGTGTGTGTGT	A	1986.54	PASS	AB=1.000;AC=12;AF=0.222;AN=54;BaseQRankSum=0.851;DP=600;FS=4.067;HRun=0;HaplotypeScore=230.7745;InbreedingCoeff=0.6575;MQ=60.06;MQ0=17;MQRankSum=-7.140;QD=12.98;ReadPosRankSum=-0.396;VQSLOD=2.3815;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:17:15.05:0,15,296	0/0:6,0:9:12.04:0,12,332	./.	0/0:27,0:17:6.23:0,6,135	0/0:22,0:25:30.10:0,30,778	0/0:19,0:24:29.21:0,29,758	0/0:19,0:21:33.11:0,33,994	0/1:30,0:28:18.14:18,0,104	0/0:12,0:13:15.05:0,15,354	0/0:16,0:19:24.08:0,24,590	0/0:10,0:15:29.59:0,30,759	0/0:23,0:27:36.12:0,36,1016	0/0:23,0:30:18.54:0,19,1155	0/0:25,0:32:54.17:0,54,1321	1/1:12,8:22:15.15:262,15,0	1/1:14,12:27:26.76:589,27,0	1/1:4,2:15:18.93:308,19,0	0/0:10,0:10:11.61:0,12,126	0/0:17,0:17:4.81:0,5,30	0/0:22,0:26:10.90:0,11,86	0/0:18,0:18:0:0,0,0	0/0:15,0:22:33.11:0,33,895	0/0:16,0:18:24.08:0,24,1092	0/0:10,0:12:11.94:0,12,218	0/0:17,0:22:33.50:0,33,912	1/1:19,0:19:3.01:55,3,0	1/1:14,17:33:39.13:887,39,0	0/1:6,0:6:14.96:35,0,15
chr10	23365562	.	T	TCTC	17003.68	PASS	AB=0.955;AC=31;AF=0.554;AN=56;BaseQRankSum=-11.552;DP=634;FS=8.514;HRun=0;HaplotypeScore=101.4036;InbreedingCoeff=0.9192;MQ=86.61;MQ0=0;MQRankSum=-5.697;QD=50.76;ReadPosRankSum=5.528;VQSLOD=7.0332;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,25:30:63.22:1375,63,0	1/1:2,9:11:24.08:516,24,0	0/0:38,0:38:87.27:0,87,1302	0/0:35,0:35:87.62:0,88,1316	1/1:2,20:25:51.18:1139,51,0	1/1:2,19:21:54.19:1204,54,0	1/1:1,21:22:57.20:1272,57,0	0/0:36,0:36:96.31:0,96,1489	1/1:3,21:24:60.21:1338,60,0	1/1:2,17:19:54.19:1206,54,0	1/1:2,17:19:54.18:1204,54,0	1/1:0,17:17:48.16:1071,48,0	1/1:1,28:30:78.27:1727,78,0	1/1:1,26:27:75.26:1672,75,0	0/0:36,0:36:93.32:0,93,1508	0/0:34,0:34:90.28:0,90,1422	0/0:17,0:17:42.14:0,42,686	0/0:11,0:11:33.11:0,33,539	0/0:20,0:20:51.17:0,51,820	0/0:18,0:18:54.18:0,54,882	0/0:24,0:24:60.20:0,60,980	1/1:4,12:17:30.10:668,30,0	1/1:1,22:24:63.22:1405,63,0	1/1:1,13:16:24.02:536,24,0	1/1:2,9:11:30.10:660,30,0	0/1:20,1:21:9.86:10,0,792	0/0:28,0:28:69.23:0,69,1105	0/0:2,0:2:6.02:0,6,98
chr10	23365830	.	T	TAC	2692.25	PASS	AB=0.841;AC=12;AF=0.214;AN=56;BaseQRankSum=-3.856;DP=701;FS=14.035;HRun=0;HaplotypeScore=97.2693;InbreedingCoeff=0.7544;MQ=61.64;MQ0=6;MQRankSum=1.211;QD=21.20;ReadPosRankSum=-1.169;VQSLOD=3.1463;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,13:19:15.05:242,15,0	0/0:8,0:8:21.06:0,21,255	0/0:32,0:26:19.22:0,19,320	0/0:31,0:25:3.56:0,4,290	0/0:31,0:31:81.25:0,81,981	0/0:37,0:37:75.21:0,75,896	0/0:30,0:30:72.19:0,72,848	0/0:30,0:32:68.77:0,69,770	0/0:30,0:30:80.93:0,81,969	0/0:33,0:33:87.25:0,87,1035	0/0:21,0:22:42.13:0,42,509	0/0:20,0:20:57.17:0,57,683	0/0:36,0:36:93.24:0,93,1100	0/0:18,0:18:54.17:0,54,654	0/0:35,0:35:81.24:0,81,970	0/0:23,0:23:51.15:0,51,606	1/1:6,19:24:48.11:721,48,0	0/1:8,7:14:16.76:147,0,17	1/1:7,4:11:12.86:237,13,0	1/1:5,23:28:54.99:938,55,0	1/1:8,15:23:36.12:572,36,0	0/0:16,0:16:33.07:0,33,375	0/0:19,0:19:54:0,54,631	0/0:24,0:24:63.19:0,63,763	0/0:22,0:23:50.99:0,51,596	0/0:28,0:28:61.82:0,62,767	0/0:44,0:44:99:0,114,1332	0/1:6,0:6:14.03:14,0,86
chr10	23366423	.	C	CATCT	10106.89	PASS	AB=1.000;AC=43;AF=0.796;AN=54;BaseQRankSum=-4.711;DP=547;FS=2.147;HRun=0;HaplotypeScore=97.8537;InbreedingCoeff=0.7935;MQ=67.39;MQ0=1;MQRankSum=-0.505;QD=22.21;ReadPosRankSum=-2.796;VQSLOD=3.7494;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:12,5:17:6.02:142,6,0	1/1:8,1:9:18.03:251,18,0	0/0:17,0:15:3:0,3,29	./.	1/1:17,1:32:33.58:590,34,0	1/1:10,12:22:21.07:497,21,0	1/1:8,6:14:12.04:284,12,0	1/1:30,0:30:17.98:213,18,0	1/1:5,7:14:15.05:340,15,0	1/1:11,15:26:45.14:998,45,0	1/1:13,15:29:42.14:858,42,0	1/1:1,12:13:24.08:569,24,0	1/1:12,19:31:45.15:1065,45,0	1/1:7,10:17:18.06:426,18,0	1/1:5,0:15:21.07:365,21,0	1/1:6,0:21:18.06:313,18,0	0/0:20,0:20:30.10:0,30,469	0/1:19,0:19:10.22:10,0,357	0/0:13,0:13:15.04:0,15,214	0/0:23,0:23:51.14:0,51,725	0/0:12,0:12:36.11:0,36,539	1/1:1,7:8:21.07:393,21,0	1/1:7,11:18:24.08:568,24,0	1/1:4,7:11:12.04:284,12,0	1/1:3,21:25:45.15:1065,45,0	1/1:20,0:24:21.53:339,22,0	1/1:19,1:35:24.08:415,24,0	1/1:18,0:25:8.95:121,9,0
chr10	23367029	.	G	GT	10936.66	PASS	AB=0.572;AC=40;AF=0.714;AN=56;BaseQRankSum=-12.295;DP=673;FS=8.178;HRun=10;HaplotypeScore=64.3846;InbreedingCoeff=0.8074;MQ=76.10;MQ0=0;MQRankSum=-1.954;QD=20.37;ReadPosRankSum=1.680;VQSLOD=5.7461;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,27:36:65.83:669,66,0	1/1:1,12:13:27.07:288,27,0	0/0:11,0:12:22:0,22,188	0/0:20,0:20:17.77:0,18,229	1/1:5,23:29:50.31:700,50,0	1/1:3,14:19:26.15:452,26,0	1/1:8,20:28:32.50:551,32,0	1/1:11,22:33:71.96:741,72,0	1/1:4,19:23:20.47:423,20,0	1/1:6,27:34:72:741,72,0	1/1:8,23:31:41.52:647,42,0	1/1:6,20:26:32.49:547,32,0	1/1:6,21:28:19.63:449,20,0	0/1:7,22:29:4.76:571,0,5	1/1:6,21:28:41.39:630,41,0	1/1:8,10:18:6.02:235,6,0	0/0:26,0:26:65.90:0,66,541	0/0:5,0:6:16.06:0,16,110	0/0:22,0:23:58.93:0,59,469	0/0:25,0:27:70:0,70,554	0/0:22,0:22:56.89:0,57,465	0/1:5,14:19:31.79:310,0,32	1/1:4,17:23:55.08:544,55,0	1/1:7,19:26:7.86:495,8,0	1/1:8,16:24:17.18:391,17,0	1/1:5,26:31:78.17:818,78,0	1/1:6,23:29:54.14:576,54,0	1/1:4,6:10:15.04:160,15,0
chr10	23367909	.	CT	C	209.39	PASS	AB=0.907;AC=4;AF=0.071;AN=56;BaseQRankSum=5.803;DP=609;FS=2.853;HRun=10;HaplotypeScore=61.4324;InbreedingCoeff=0.4088;MQ=76.02;MQ0=0;MQRankSum=0.692;QD=3.74;ReadPosRankSum=0.201;VQSLOD=-0.2931;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:3,14:17:5.81:279,6,0	0/0:11,0:11:24.95:0,25,267	0/0:16,1:17:6.93:0,7,271	0/1:17,2:18:23.45:23,0,187	0/0:24,0:25:59.99:0,60,637	0/0:21,0:21:47.95:0,48,504	0/1:18,2:20:0.99:1,0,439	0/0:38,1:39:64.16:0,64,914	0/0:17,0:17:45.07:0,45,477	0/0:26,0:26:66.13:0,66,710	0/0:20,0:20:59.75:0,60,635	0/0:21,0:21:54.15:0,54,597	0/0:32,0:32:83.43:0,83,895	0/0:12,0:12:36.09:0,36,390	0/0:14,0:14:36.09:0,36,392	0/0:25,0:26:72.02:0,72,770	0/0:10,0:11:32.92:0,33,346	0/0:19,1:20:22.06:0,22,458	0/0:33,0:34:78.03:0,78,836	0/0:36,0:36:99:0,99,1082	0/0:19,0:19:51.14:0,51,564	0/0:28,0:28:75.20:0,75,823	0/0:16,1:18:15.91:0,16,387	0/0:10,0:10:30.08:0,30,332	0/0:22,0:22:57.10:0,57,600	0/0:26,0:26:69.18:0,69,757	0/0:35,1:36:70.19:0,70,994	0/0:11,0:11:33.09:0,33,365
chr10	23369273	.	T	TA	9942.02	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=1.132;DP=688;FS=3.173;HRun=8;HaplotypeScore=108.6163;InbreedingCoeff=0.9668;MQ=74.78;MQ0=2;MQRankSum=-0.223;QD=27.02;ReadPosRankSum=1.197;VQSLOD=4.4480;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,19:22:60.12:665,60,0	1/1:0,13:13:33.05:381,33,0	0/0:28,0:22:16.86:0,17,226	0/0:34,1:24:1.46:0,1,167	1/1:16,17:33:72.14:800,72,0	1/1:2,22:24:69.20:788,69,0	1/1:6,19:25:54.16:622,54,0	0/0:33,0:33:78.02:0,78,709	1/1:7,11:18:45.03:503,45,0	1/1:2,18:20:54.16:623,54,0	1/1:5,29:34:81.05:919,81,0	1/1:6,15:21:47.95:518,48,0	1/1:1,22:23:51.15:586,51,0	1/1:1,25:26:54.16:623,54,0	0/0:40,0:40:99:0,99,896	0/0:22,0:22:57:0,57,516	0/0:38,0:38:99:0,99,898	0/0:24,0:24:55.88:0,56,498	0/0:16,0:16:45.47:0,45,401	0/0:19,0:19:45.01:0,45,409	0/0:9,0:9:21.01:0,21,192	1/1:7,17:24:60.16:674,60,0	1/1:8,13:21:48.11:535,48,0	1/1:9,25:33:81.23:924,81,0	1/1:4,26:30:69.16:782,69,0	0/0:22,1:23:31.42:0,31,542	0/0:25,0:25:66.01:0,66,599	0/0:7,0:7:18.01:0,18,165
chr10	23369426	.	AG	A	9520.77	PASS	AB=0.616;AC=25;AF=0.446;AN=56;BaseQRankSum=7.931;DP=848;FS=3.429;HRun=2;HaplotypeScore=94.3852;InbreedingCoeff=0.6644;MQ=56.15;MQ0=53;MQRankSum=4.370;QD=22.19;ReadPosRankSum=3.640;VQSLOD=4.9072;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:11,25:29:40.89:941,41,0	1/1:1,7:7:21.07:272,21,0	0/0:35,0:16:37.58:0,38,469	0/0:32,0:18:39.46:0,39,584	0/1:9,21:26:4.81:474,0,5	1/1:6,19:23:42.08:595,42,0	0/1:10,16:20:9.36:454,0,9	0/0:29,0:18:48.16:0,48,716	1/1:6,21:23:55.06:702,55,0	0/1:8,25:33:99:804,0,229	0/1:9,9:18:73.89:378,0,74	1/1:9,19:25:42.61:546,43,0	1/1:7,27:34:68.25:847,68,0	1/1:14,20:27:55.99:705,56,0	0/0:41,0:39:87.29:0,87,1300	0/0:33,1:34:54.55:0,55,1249	0/0:47,0:44:99:0,99,1444	0/0:28,0:23:60.55:0,61,828	0/0:26,0:19:54.13:0,54,762	0/0:26,0:22:54.18:0,54,809	0/0:33,0:23:65.30:0,65,880	1/1:6,22:26:64.19:791,64,0	0/1:10,13:21:99:449,0,169	1/1:12,37:43:47.06:902,47,0	1/1:12,18:25:51.17:661,51,0	0/0:38,1:37:69.38:0,69,1493	0/0:34,0:30:93.31:0,93,1385	0/0:15,0:15:33.11:0,33,493
chr10	23369784	.	A	AT	2773.57	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=12.686;DP=710;FS=3.336;HRun=6;HaplotypeScore=73.3129;InbreedingCoeff=0.9990;MQ=76.60;MQ0=0;MQRankSum=-1.064;QD=28.89;ReadPosRankSum=0.639;VQSLOD=4.3794;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:78.14:0,78,787	0/0:8,0:8:21.03:0,21,207	0/0:24,0:24:53.89:0,54,507	0/0:22,0:21:39.04:0,39,367	0/0:28,0:28:72.16:0,72,733	0/0:30,0:30:78.15:0,78,788	0/0:16,0:16:42.09:0,42,429	0/0:35,0:35:87.18:0,87,882	0/0:27,0:27:72.16:0,72,735	0/0:29,0:29:75.16:0,75,765	0/0:15,0:15:39.07:0,39,391	0/0:38,0:38:99:0,108,1102	0/0:31,0:31:90.18:0,90,905	0/0:30,0:30:87.20:0,87,888	0/0:35,0:35:99:0,102,1040	0/0:23,0:23:63.13:0,63,636	1/1:1,23:24:57.18:717,57,0	1/1:0,14:14:42.11:512,42,0	1/1:1,15:16:42.11:513,42,0	1/1:4,14:18:39.12:491,39,0	1/1:4,20:24:57.18:717,57,0	0/0:30,0:30:78.17:0,78,796	0/0:27,0:27:75.11:0,75,742	0/0:24,0:24:66.11:0,66,658	0/0:33,0:33:90.20:0,90,918	0/0:33,0:33:84.18:0,84,853	0/0:27,0:26:72.12:0,72,720	0/0:19,0:19:51.12:0,51,520
chr10	23370685	.	G	GAC	3108.36	PASS	AB=0.795;AC=32;AF=0.615;AN=52;BaseQRankSum=-4.221;DP=740;FS=0.000;HRun=0;HaplotypeScore=155.6595;InbreedingCoeff=0.0506;MQ=64.95;MQ0=13;MQRankSum=1.589;QD=5.52;ReadPosRankSum=-2.363;VQSLOD=2.7382;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:28,1:38:6:52,6,0	0/1:6,0:7:23.74:40,0,24	./.	./.	1/1:18,5:24:5.85:89,6,0	0/1:24,2:25:11.77:172,0,12	0/1:22,8:30:99:154,0,106	1/1:29,0:27:9.99:42,10,0	1/1:13,8:25:1.61:310,2,0	0/1:26,1:26:34.82:228,0,35	1/1:4,8:14:9.02:115,9,0	1/1:11,15:27:0.50:412,0,0	0/1:25,8:34:74.31:74,0,75	0/1:28,7:35:35.63:36,0,56	1/1:40,0:40:11.04:98,11,0	1/1:32,0:32:8.89:77,9,0	0/0:15,0:34:31.25:0,31,154	0/0:3,0:10:19.84:0,20,96	0/0:7,0:10:8.52:0,9,42	0/0:7,0:19:17.04:0,17,84	0/0:30,0:50:30.60:0,31,156	0/1:12,11:24:22.80:240,0,23	0/1:13,6:19:40.67:77,0,41	0/1:19,20:39:19.64:500,0,20	0/1:11,9:22:76.08:111,0,76	1/1:28,0:27:36.85:306,37,0	1/1:25,0:33:18.06:140,18,0	1/1:6,0:6:0.47:1,0,0
chr10	23371704	.	C	CAT	16132.52	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-10.308;DP=629;FS=0.704;HRun=0;HaplotypeScore=119.4410;InbreedingCoeff=0.9857;MQ=87.73;MQ0=0;MQRankSum=-6.032;QD=38.23;ReadPosRankSum=4.335;VQSLOD=6.8479;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:49.26:0,49,405	1/1:1,18:19:42.61:714,43,0	0/0:27,0:27:62.61:0,63,838	0/0:26,0:26:65.79:0,66,1021	1/1:0,33:34:72.25:1227,72,0	1/1:3,23:28:45.15:773,45,0	1/1:8,14:22:48.08:740,48,0	0/0:23,0:23:55.37:0,55,353	1/1:4,15:19:42.14:716,42,0	1/1:3,21:24:59.56:1005,60,0	1/1:2,22:25:57.19:964,57,0	1/1:1,26:28:72.25:1223,72,0	1/1:6,12:19:38.62:660,39,0	1/1:3,15:18:35.61:614,36,0	0/0:22,0:22:59.51:0,60,422	0/0:20,0:20:46.54:0,47,350	1/1:3,25:28:66.63:1125,67,0	1/1:0,4:4:9.03:154,9,0	1/1:3,9:12:26.59:457,27,0	1/1:3,32:35:75.38:1555,75,0	1/1:0,15:15:39.13:664,39,0	1/1:2,25:27:60.21:1017,60,0	1/1:4,19:23:42.14:716,42,0	1/1:4,14:18:45.12:710,45,0	1/1:2,22:24:63.79:1098,64,0	0/0:35,1:36:42.84:0,43,538	0/0:25,0:25:36.38:0,36,420	0/0:4,0:4:11.95:0,12,93
chr10	23372328	.	AT	A	7593.59	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=9.476;DP=431;FS=3.632;HRun=9;HaplotypeScore=54.2891;InbreedingCoeff=0.9147;MQ=67.16;MQ0=0;MQRankSum=1.137;QD=22.60;ReadPosRankSum=1.116;VQSLOD=5.7256;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:36.06:0,36,400	1/1:0,9:9:27.01:247,27,0	0/0:8,0:7:12.04:0,12,139	0/0:3,0:3:5.05:0,5,41	1/1:3,13:16:36.01:329,36,0	1/1:0,25:25:66.04:604,66,0	1/1:1,13:14:39.02:357,39,0	1/1:6,22:28:66.02:604,66,0	1/1:1,16:17:39.02:357,39,0	1/1:2,15:17:45.01:407,45,0	1/1:5,22:27:22.40:460,22,0	1/1:1,17:18:48.03:439,48,0	1/1:2,16:18:36.01:329,36,0	1/1:3,9:12:21.01:192,21,0	1/1:0,13:13:36.02:330,36,0	1/1:0,10:10:30.02:275,30,0	0/0:11,0:11:33.10:0,33,381	0/0:15,0:15:42.07:0,42,456	0/0:16,0:16:42.12:0,42,477	0/0:19,1:20:32.71:0,33,630	0/0:9,0:9:27.07:0,27,302	1/1:0,8:8:24.01:219,24,0	1/1:1,19:20:57.02:522,57,0	1/1:0,1:1:3:27,3,0	1/1:4,31:35:84.04:769,84,0	1/1:1,19:20:54.02:494,54,0	1/1:3,23:26:66.03:604,66,0	1/1:1,1:2:3:27,3,0
chr10	23373015	.	CAAAGAATGTGATACACT	C	22650.42	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=17.262;DP=562;FS=4.777;HRun=0;HaplotypeScore=281.4094;InbreedingCoeff=0.9724;MQ=86.18;MQ0=0;MQRankSum=-15.878;QD=90.97;ReadPosRankSum=5.069;VQSLOD=3.8596;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:51.11:0,51,3554	1/1:0,8:8:21.07:1034,21,0	0/0:30,0:30:85.16:0,85,4704	0/0:16,0:16:33.11:0,33,2004	1/1:5,15:20:30.10:1100,30,0	1/1:5,24:29:66.23:3128,66,0	1/1:1,6:7:15.05:668,15,0	0/0:35,0:35:96.32:0,96,6833	1/1:4,12:16:30.10:1408,30,0	1/1:5,21:26:60.17:2518,60,0	1/1:2,13:15:33.11:1252,33,0	1/1:3,15:18:39.13:1866,39,0	1/1:3,23:26:63.22:3068,63,0	1/1:4,16:20:36.12:1683,36,0	0/0:36,0:36:99:0,108,8660	0/0:17,0:17:48.16:0,48,3710	0/0:4,0:4:12.04:0,12,909	0/0:10,0:10:30.10:0,30,2486	0/0:34,0:34:99:0,99,7150	0/0:36,0:36:99:0,108,8562	0/0:14,0:14:42.14:0,42,3121	1/1:5,20:25:45.15:2030,45,0	1/1:5,8:13:21.07:976,21,0	1/1:2,8:10:5.54:295,6,0	1/1:3,13:16:33.11:1625,33,0	0/0:28,0:28:81.27:0,81,5677	0/0:31,0:30:87.24:0,87,5389	0/0:5,0:5:12.04:0,12,700
chr10	23373498	.	TG	T	4000.16	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=3.483;DP=656;FS=2.339;HRun=1;HaplotypeScore=73.6713;InbreedingCoeff=0.9974;MQ=99.26;MQ0=0;MQRankSum=-7.784;QD=38.84;ReadPosRankSum=2.051;VQSLOD=4.4577;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,24:24:69.23:965,69,0	0/0:7,0:7:21.07:0,21,331	0/0:44,0:44:99:0,132,2007	0/0:25,0:24:63.21:0,63,1006	0/0:31,0:31:93.28:0,93,1434	0/0:28,0:28:84.27:0,84,1319	0/0:12,0:12:36.11:0,36,552	0/0:23,0:23:69.22:0,69,1061	0/0:36,0:36:99:0,108,1625	0/0:30,0:30:90.31:0,90,1439	0/0:15,0:15:45.15:0,45,718	0/0:20,0:20:60.18:0,60,913	0/0:32,0:32:96.31:0,96,1511	0/0:24,0:24:69.24:0,69,1103	0/0:26,0:26:78.27:0,78,1247	0/0:31,0:31:93.30:0,93,1463	1/1:0,11:11:30.10:419,30,0	1/1:0,9:9:21.03:272,21,0	1/1:1,19:20:60.19:814,60,0	1/1:0,17:17:51.13:691,51,0	1/1:0,22:22:60.20:839,60,0	0/0:21,0:21:63.21:0,63,1007	0/0:23,0:23:69.24:0,69,1101	0/0:27,0:27:81.25:0,81,1263	0/0:34,0:34:99:0,102,1583	0/0:29,0:29:87.30:0,87,1391	0/0:28,0:28:84.26:0,84,1307	0/0:7,0:7:21.07:0,21,335
chr10	23375395	.	T	TTG	5739.58	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-13.382;DP=825;FS=5.123;HRun=0;HaplotypeScore=92.3910;InbreedingCoeff=0.9556;MQ=67.57;MQ0=5;MQRankSum=-0.210;QD=35.65;ReadPosRankSum=2.749;VQSLOD=7.3765;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:96.25:0,96,1182	0/0:8,0:8:18.03:0,18,211	0/0:32,0:14:12.44:0,12,130	0/0:40,0:23:4.05:0,4,247	0/0:40,0:40:99:0,114,1397	0/0:16,0:16:39.12:0,39,492	0/0:29,0:29:78.22:0,78,968	0/0:32,0:32:78.23:0,78,962	0/0:32,0:32:84.27:0,84,1060	0/0:25,0:25:63.19:0,63,785	0/0:24,0:24:63.19:0,63,783	0/0:39,0:39:99:0,114,1388	0/0:29,0:30:78.08:0,78,960	0/0:30,0:31:80.83:0,81,968	0/0:36,0:36:90.26:0,90,1109	0/0:30,0:30:84.23:0,84,1021	1/1:1,30:31:78.25:1269,78,0	1/1:1,9:10:21.03:321,21,0	1/1:12,13:26:42.13:653,42,0	1/1:5,32:37:87.30:1403,87,0	1/1:7,50:57:99:2094,126,0	0/0:29,0:29:75.23:0,75,933	0/0:29,0:30:75.05:0,75,898	0/0:36,0:36:99:0,102,1273	0/0:26,0:26:66.20:0,66,821	0/0:29,0:29:78.24:0,78,972	0/0:27,0:27:78.22:0,78,954	0/0:6,0:6:18.06:0,18,227
chr10	23376159	.	T	TGGAGTATA	24884.35	PASS	AB=0.947;AC=29;AF=0.518;AN=56;BaseQRankSum=-12.682;DP=566;FS=7.471;HRun=0;HaplotypeScore=134.5799;InbreedingCoeff=0.9102;MQ=76.33;MQ0=3;MQRankSum=-17.662;QD=82.95;ReadPosRankSum=2.180;VQSLOD=5.3403;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:90.31:0,90,2567	1/1:1,5:8:15.05:647,15,0	0/0:17,0:17:42.14:0,42,1124	0/0:16,0:15:42.14:0,42,980	1/1:4,29:36:51.18:2269,51,0	1/1:5,13:20:42.14:1795,42,0	1/1:5,7:11:24.08:1064,24,0	0/0:36,0:36:99:0,102,2787	1/1:6,9:15:39.13:1678,39,0	1/1:4,19:24:63.21:2700,63,0	1/1:5,25:32:48.15:2136,48,0	1/1:3,24:27:69.24:3060,69,0	1/1:7,12:19:38.87:1654,39,0	1/1:4,15:20:54.19:2401,54,0	0/0:26,0:26:75.24:0,75,2003	0/1:17,1:18:82.50:82,0,1299	0/0:11,0:11:27.09:0,27,717	0/0:6,0:6:18.06:0,18,479	0/0:22,0:22:63.20:0,63,1641	0/0:20,0:20:57.18:0,57,1530	0/0:14,0:14:42.14:0,42,1137	1/1:2,9:12:27.09:1201,27,0	1/1:1,13:16:27.09:1202,27,0	1/1:2,5:7:6.02:267,6,0	1/1:5,25:32:63.22:2727,63,0	0/0:25,0:25:72.25:0,72,2001	0/0:29,0:29:87.30:0,87,2457	0/0:13,0:13:39.13:0,39,1120
chr10	23377114	.	C	CA	6384.52	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-14.924;DP=554;FS=10.395;HRun=9;HaplotypeScore=50.9427;InbreedingCoeff=0.9947;MQ=71.22;MQ0=0;MQRankSum=-0.733;QD=26.83;ReadPosRankSum=0.241;VQSLOD=4.7805;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:74.95:0,75,646	0/0:8,0:8:14.99:0,15,130	0/0:14,0:13:38.93:0,39,326	0/0:16,0:16:35.72:0,36,295	0/0:29,0:29:77.96:0,78,673	0/0:23,0:23:59.97:0,60,521	0/0:13,0:13:29.99:0,30,260	1/1:3,18:22:57.10:616,57,0	0/0:18,0:18:24.41:0,24,367	0/0:31,0:31:77.96:0,78,677	0/0:20,0:20:44.93:0,45,380	0/0:14,0:14:41.99:0,42,365	0/0:18,0:18:47.96:0,48,412	0/0:14,0:14:35.97:0,36,310	1/1:5,22:27:60.16:664,60,0	1/1:1,14:15:39.11:431,39,0	1/1:0,22:22:63.17:697,63,0	1/1:0,7:8:17.52:227,18,0	1/1:6,24:31:54.98:809,55,0	1/1:4,25:29:75.20:829,75,0	1/1:4,7:11:21.06:232,21,0	0/0:16,0:16:38.98:0,39,339	0/0:22,0:22:56.99:0,57,495	0/0:11,0:11:32.99:0,33,287	0/0:17,0:17:38.98:0,39,338	1/1:9,20:29:37.10:629,37,0	1/1:5,32:36:93.07:1018,93,0	1/1:0,7:7:21.06:232,21,0
chr10	23377653	.	GA	G	393.22	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=0.609;DP=625;FS=0.000;HRun=7;HaplotypeScore=104.8282;InbreedingCoeff=0.9880;MQ=63.22;MQ0=1;MQRankSum=-0.668;QD=17.87;ReadPosRankSum=0.056;VQSLOD=2.9334;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,17:22:48.10:488,48,0	0/0:15,0:15:39.77:0,40,196	0/0:26,0:18:21.15:0,21,520	0/0:24,0:21:51.16:0,51,630	0/0:40,0:40:99:0,103,510	0/0:18,0:18:51.13:0,51,252	0/0:11,0:11:20.01:0,20,104	0/0:33,0:33:84.25:0,84,1036	0/0:16,0:16:42.61:0,43,210	0/0:31,0:31:59.64:0,60,366	0/0:24,0:24:62.45:0,62,308	0/0:25,0:25:65.34:0,65,322	0/0:21,0:21:51.04:0,51,250	0/0:32,0:32:76.83:0,77,384	0/0:28,1:29:50.60:0,51,921	0/0:24,0:24:66.02:0,66,782	0/0:15,0:15:36.05:0,36,430	0/0:20,0:20:39.12:0,39,488	0/0:20,0:20:57.18:0,57,717	0/0:30,0:30:84.27:0,84,1057	0/0:19,0:19:57.17:0,57,701	0/0:17,0:17:45.68:0,46,236	0/0:22,0:22:56.82:0,57,280	0/0:14,0:14:28.57:0,29,152	0/0:22,0:21:48.35:0,48,240	0/0:22,0:22:60.17:0,60,730	0/0:24,0:24:69.22:0,69,868	0/0:8,0:8:24.08:0,24,302
chr10	23377660	.	A	AT	12004.42	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-15.862;DP=623;FS=1.329;HRun=0;HaplotypeScore=59.5811;InbreedingCoeff=0.9982;MQ=61.67;MQ0=2;MQRankSum=1.688;QD=39.62;ReadPosRankSum=5.163;VQSLOD=5.1079;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:48.35:0,48,260	1/1:0,15:15:45.07:645,45,0	0/0:32,0:19:55.34:0,55,704	0/0:19,0:16:48.16:0,48,645	1/1:0,39:39:99:1649,114,0	1/1:0,19:19:54.18:808,54,0	1/1:1,8:9:18.06:269,18,0	0/0:37,0:37:99:0,102,1330	1/1:0,18:18:45.15:673,45,0	1/1:1,29:31:81.46:1242,81,0	1/1:0,24:25:68.97:992,69,0	1/1:0,25:25:69.23:1032,69,0	1/1:0,18:18:54.18:807,54,0	1/1:0,32:32:78.26:1167,78,0	0/0:27,0:27:81.12:0,81,1085	0/0:22,1:23:24.31:0,24,846	0/0:15,0:15:40.34:0,40,505	0/0:17,0:17:45.09:0,45,580	0/0:25,0:24:66.21:0,66,881	0/0:30,0:30:90.27:0,90,1218	0/0:20,0:20:56.92:0,57,749	1/1:1,17:18:47.99:656,48,0	1/1:0,21:21:60.20:898,60,0	1/1:0,13:13:27.09:404,27,0	1/1:0,20:19:51.17:759,51,0	0/0:24,0:24:39.24:0,39,788	0/0:25,0:25:75.23:0,75,1011	0/0:8,0:8:24.08:0,24,334
chr10	23379483	.	ATTCCCTG	A	15493.05	PASS	AB=0.941;AC=29;AF=0.518;AN=56;BaseQRankSum=16.904;DP=537;FS=11.366;HRun=0;HaplotypeScore=157.6215;InbreedingCoeff=0.9205;MQ=75.29;MQ0=0;MQRankSum=-17.644;QD=55.73;ReadPosRankSum=3.160;VQSLOD=4.4382;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:84.25:0,84,2928	1/1:1,12:13:39.13:1011,39,0	0/0:20,0:20:57.20:0,57,2018	0/0:15,0:15:45.15:0,45,1464	1/1:2,20:22:39.13:1005,39,0	1/1:2,7:9:15.05:389,15,0	1/1:3,10:13:18.06:467,18,0	0/0:16,0:16:45.15:0,45,1707	1/1:2,14:16:42.14:1090,42,0	1/1:1,26:27:75.26:1947,75,0	1/1:1,25:26:48.16:1246,48,0	1/1:0,19:19:57.20:1479,57,0	1/1:0,18:18:54.19:1402,54,0	1/1:5,14:19:39.13:1012,39,0	0/0:16,0:16:48.16:0,48,1920	0/1:15,1:16:29.71:30,0,1751	0/0:34,0:34:96.33:0,96,3770	0/0:14,0:14:42.14:0,42,1585	0/0:21,0:21:60.21:0,60,2210	0/0:19,0:19:57.20:0,57,2277	0/0:12,0:12:36.12:0,36,1439	1/1:1,20:20:45.15:1168,45,0	1/1:0,20:20:45.15:1145,45,0	1/1:5,9:14:12.04:311,12,0	1/1:0,25:25:69.24:1791,69,0	0/0:27,0:27:78.27:0,78,3099	0/0:26,0:26:72.25:0,72,2797	0/0:9,0:9:21.07:0,21,839
chr10	23379551	.	T	TCA	6685.51	PASS	AB=0.776;AC=39;AF=0.722;AN=54;BaseQRankSum=-2.713;DP=668;FS=11.104;HRun=0;HaplotypeScore=153.5791;InbreedingCoeff=-0.3094;MQ=51.37;MQ0=21;MQRankSum=0.780;QD=11.51;ReadPosRankSum=1.228;VQSLOD=3.9178;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:18,10:30:0.58:295,1,0	0/1:10,2:12:38.06:158,0,38	./.	0/0:43,0:19:3.01:0,3,32	0/1:25,3:28:45.59:183,0,46	0/1:10,7:17:3.44:353,0,3	0/1:18,5:25:28.68:303,0,29	1/1:31,0:30:18.50:133,19,0	0/1:15,5:19:9.42:282,0,9	1/1:23,7:28:3.33:426,3,0	1/1:20,4:24:17.95:243,18,0	1/1:12,8:21:33.06:473,33,0	1/1:15,5:21:33.09:465,33,0	0/1:11,8:19:73.31:413,0,73	1/1:22,0:21:6.74:38,7,0	1/1:25,0:25:3.98:22,4,0	0/1:18,25:44:14.76:796,0,15	0/1:12,3:14:35.28:140,0,35	0/1:20,4:22:14.57:188,0,15	0/1:12,10:22:67.44:311,0,67	0/1:15,10:27:42.95:249,0,43	1/1:14,4:18:21.03:275,21,0	0/1:14,4:18:15.46:210,0,15	0/1:10,3:13:21.48:101,0,21	1/1:13,9:22:17.15:471,17,0	1/1:17,0:17:6.55:48,7,0	1/1:26,0:25:5.79:83,6,0	1/1:2,0:6:3:26,3,0
chr10	23380536	.	ATGTG	A	10722.24	PASS	AB=0.612;AC=31;AF=0.554;AN=56;BaseQRankSum=1.456;DP=906;FS=1.817;HRun=0;HaplotypeScore=164.3011;InbreedingCoeff=0.7715;MQ=55.79;MQ0=26;MQRankSum=1.496;QD=23.41;ReadPosRankSum=5.428;VQSLOD=4.5666;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,1:39:6.76:0,7,205	1/1:1,9:10:26.83:415,27,0	0/0:55,0:22:35.52:0,36,505	0/0:67,0:25:39.11:0,39,697	1/1:10,28:37:66.22:1108,66,0	1/1:2,29:33:54.16:841,54,0	1/1:3,17:20:38.92:618,39,0	0/0:38,0:39:77.18:0,77,1428	1/1:4,23:27:39.13:655,39,0	1/1:10,16:26:51.12:843,51,0	1/1:6,24:30:48.07:745,48,0	1/1:8,21:28:41.88:705,42,0	1/1:7,27:34:54.18:900,54,0	1/1:7,26:32:51.11:824,51,0	0/0:38,0:41:99:0,101,2205	0/0:32,0:37:80.21:0,80,1597	0/0:7,0:23:28.33:0,28,126	0/1:7,1:17:89.15:89,0,105	0/1:11,0:20:43.32:43,0,123	0/1:5,2:35:16.80:17,0,341	0/0:10,0:43:51.67:0,52,291	1/1:8,20:27:42.10:675,42,0	1/1:4,19:25:35.85:582,36,0	1/1:5,22:27:51.17:856,51,0	1/1:1,23:23:48.16:806,48,0	0/0:40,0:44:65.80:0,66,1924	0/0:34,1:37:33.38:0,33,1738	0/0:16,0:16:42.14:0,42,1018
chr10	23380988	.	TACAC	T	1205.60	PASS	AB=0.994;AC=30;AF=0.600;AN=50;BaseQRankSum=-0.094;DP=505;FS=5.610;HRun=0;HaplotypeScore=113.5450;InbreedingCoeff=0.0510;MQ=60.28;MQ0=7;MQRankSum=0.435;QD=3.62;ReadPosRankSum=-0.674;VQSLOD=1.6740;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:14.96:0,15,120	0/0:7,0:7:2.94:0,3,18	./.	./.	0/0:14,0:14:0:0,0,0	0/1:18,0:18:18.44:28,0,18	0/1:16,0:15:13.97:30,0,14	0/0:16,0:15:0:0,0,0	./.	0/1:20,0:20:51.83:52,0,59	0/0:15,0:15:2.92:0,3,20	0/1:24,0:23:16.41:63,0,16	1/1:18,0:18:6.07:78,6,0	1/1:16,0:15:2.34:33,2,0	1/1:8,4:14:15:223,15,0	1/1:10,8:20:17.42:230,17,0	0/1:25,0:25:6.01:70,0,6	0/1:8,0:8:16.62:17,0,48	1/1:11,0:11:6.89:57,7,0	1/1:17,0:17:0.47:1,0,0	1/1:30,0:29:1.89:17,2,0	0/0:16,0:16:5.99:0,6,49	0/1:21,0:21:11.52:31,0,12	1/1:20,0:20:7.20:76,7,0	1/1:12,0:12:5.31:77,5,0	1/1:14,1:15:6.01:74,6,0	1/1:17,0:20:8.96:70,9,0	0/1:5,0:5:8.97:121,0,9
chr10	23381029	.	ACACACACACG	A	1402.70	PASS	AB=0.922;AC=11;AF=0.196;AN=56;BaseQRankSum=-0.469;DP=597;FS=26.464;HRun=0;HaplotypeScore=155.3326;InbreedingCoeff=0.1457;MQ=61.81;MQ0=18;MQRankSum=2.291;QD=7.27;ReadPosRankSum=1.937;VQSLOD=0.5691;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:49:27.55:0,28,610	0/1:9,0:9:7.68:8,0,254	0/0:18,0:12:19.67:0,20,233	0/0:17,0:11:12.46:0,12,229	0/0:18,0:18:4.34:0,4,71	0/0:17,0:15:13.29:0,13,152	0/0:28,0:26:12.04:0,12,209	0/0:28,0:27:66.56:0,67,581	0/0:12,0:12:2.99:0,3,24	0/1:24,0:23:58.59:59,0,611	0/0:18,0:18:9.37:0,9,153	0/0:25,0:24:18.99:0,19,297	0/1:21,1:22:7.32:7,0,126	0/1:26,0:25:40.82:223,0,41	0/0:23,0:23:42.81:0,43,615	0/0:27,0:27:53.64:0,54,625	0/1:5,20:25:24.36:221,0,24	0/1:14,0:13:88.89:145,0,89	1/1:18,1:19:44.24:487,44,0	0/1:16,1:16:8.48:26,0,8	1/1:37,0:33:20.88:380,21,0	0/0:14,0:13:9.03:0,9,204	0/0:22,0:22:11.30:0,11,133	0/0:25,0:23:0.43:0,0,208	0/0:17,0:17:6.02:0,6,76	0/0:22,0:21:52.28:0,52,598	0/0:15,0:14:33.74:0,34,288	0/0:8,0:8:19.83:0,20,311
chr10	23381031	.	ACACACACG	A	2091.57	PASS	AB=0.988;AC=14;AF=0.259;AN=54;BaseQRankSum=-0.168;DP=594;FS=9.386;HRun=0;HaplotypeScore=141.3800;InbreedingCoeff=0.2962;MQ=66.23;MQ0=18;MQRankSum=0.057;QD=9.96;ReadPosRankSum=0.803;VQSLOD=2.2360;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:51:24.50:0,24,363	0/1:10,0:10:49.01:49,0,102	0/0:21,0:15:21.50:0,22,278	0/0:19,0:13:1.42:0,1,238	0/0:18,0:18:0.86:0,1,22	0/0:17,0:15:1.22:0,1,42	0/0:27,0:25:6.81:0,7,74	0/0:28,0:27:67.58:0,68,564	./.	0/1:22,0:21:99:136,0,248	0/0:17,0:17:3.02:0,3,61	0/0:25,0:24:14.83:0,15,121	0/1:23,0:23:9.24:9,0,34	1/1:25,0:24:36.57:332,37,0	0/0:19,0:19:39.85:0,40,389	0/0:27,0:27:21.98:0,22,363	0/1:25,0:25:2.40:217,0,2	0/1:12,1:12:39.41:218,0,39	1/1:18,0:19:48.17:500,48,0	1/1:2,13:14:9.29:55,9,0	1/1:36,0:32:65.18:692,65,0	0/0:15,0:14:9.02:0,9,123	0/0:23,0:23:4.98:0,5,41	0/1:22,0:20:47.65:48,0,57	0/0:17,0:17:5.48:0,5,24	0/0:24,0:23:20.58:0,21,409	0/0:15,0:14:15.98:0,16,123	0/0:8,0:8:19.83:0,20,234
chr10	23381033	.	ACACACG	A	2277.63	PASS	AB=0.979;AC=29;AF=0.537;AN=54;BaseQRankSum=3.519;DP=581;FS=2.970;HRun=0;HaplotypeScore=124.5955;InbreedingCoeff=0.1508;MQ=67.35;MQ0=18;MQRankSum=-0.338;QD=5.65;ReadPosRankSum=2.439;VQSLOD=2.4659;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:55:15.45:0,15,123	0/1:10,0:10:3.61:68,0,4	0/0:22,0:16:25.87:0,26,304	0/0:19,0:13:8.88:0,9,245	1/1:17,0:17:0.98:3,1,0	0/1:18,0:16:11.56:32,0,12	0/1:27,0:25:11.10:31,0,11	0/0:28,0:27:67.53:0,68,522	./.	0/1:22,0:21:22.34:278,0,22	0/1:15,1:16:14.28:19,0,14	0/1:23,1:23:16.59:21,0,17	1/1:23,0:23:7.97:49,8,0	1/1:23,0:22:50.62:427,51,0	0/0:19,0:19:32.96:0,33,210	0/1:24,0:24:5.05:5,0,191	1/1:25,0:25:15.24:189,15,0	0/1:13,0:12:14.77:199,0,15	1/1:18,0:18:47.67:432,48,0	1/1:15,0:14:6.34:36,6,0	1/1:35,0:31:56.56:475,57,0	0/0:15,0:14:5.99:0,6,49	0/1:21,1:22:9.46:9,0,12	1/1:8,14:20:8.75:60,9,0	1/1:17,0:17:5.67:28,6,0	0/1:18,2:19:30.57:31,0,307	0/1:12,0:11:61.17:61,0,65	0/0:8,0:8:19.08:0,19,143
chr10	23381035	.	ACACG	A	2906.51	PASS	AB=0.849;AC=39;AF=0.722;AN=54;BaseQRankSum=5.004;DP=546;FS=1.746;HRun=0;HaplotypeScore=103.7043;InbreedingCoeff=0.2523;MQ=70.77;MQ0=17;MQRankSum=0.503;QD=6.28;ReadPosRankSum=4.024;VQSLOD=2.1356;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:51,0:50:0.05:1,0,0	1/1:7,0:7:11.92:97,12,0	0/0:24,0:18:40.15:0,40,350	0/0:20,0:14:24.16:0,24,282	1/1:1,15:16:0.82:2,1,0	0/1:5,12:15:0.38:55,0,0	1/1:3,23:24:3.48:60,3,0	0/0:27,0:26:67.03:0,67,479	0/1:0,13:13:0:0,0,0	1/1:18,0:17:41.49:395,41,0	0/1:3,13:16:0.10:1,0,0	1/1:6,15:20:5.43:118,5,0	1/1:1,21:22:8.95:138,9,0	1/1:20,0:20:50.75:440,51,0	0/1:19,0:19:99:126,0,115	0/1:22,0:22:94.11:94,0,158	1/1:25,0:25:12.62:131,13,0	0/1:11,0:10:0.38:186,0,0	1/1:18,0:18:47.67:405,48,0	1/1:15,0:14:6.34:35,6,0	1/1:29,0:25:50.31:392,50,0	./.	1/1:4,16:20:3.01:59,3,0	1/1:18,2:18:8.87:134,9,0	1/1:1,16:17:6.02:117,6,0	0/1:20,0:19:24.10:24,0,309	0/1:12,0:11:6.98:7,0,87	0/1:8,0:8:41.15:41,0,70
chr10	23381037	.	ACG	A	2180.72	PASS	AB=1.000;AC=34;AF=0.630;AN=54;BaseQRankSum=2.649;DP=532;FS=4.836;HRun=0;HaplotypeScore=94.8603;InbreedingCoeff=0.7392;MQ=75.39;MQ0=16;MQRankSum=-0.487;QD=6.27;ReadPosRankSum=3.366;VQSLOD=2.5964;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,45:46:2.80:45,3,0	1/1:5,0:5:11.95:97,12,0	0/0:26,0:20:52.07:0,52,418	0/0:23,0:17:40.68:0,41,360	0/1:15,0:15:0.20:0,0,0	1/1:14,0:13:4.82:33,5,0	1/1:24,0:23:3:27,3,0	0/0:27,0:26:66.12:0,66,478	0/0:13,0:13:0:0,0,0	1/1:15,1:15:41.82:372,42,0	0/1:14,0:14:0:0,0,0	1/1:18,0:18:5.62:54,6,0	1/1:22,0:22:8.99:73,9,0	1/1:19,0:19:50.73:396,51,0	0/0:20,0:20:22.24:0,22,205	0/0:22,0:22:29.45:0,29,237	1/1:25,0:25:15.28:122,15,0	1/1:11,0:10:21.68:194,22,0	1/1:20,0:20:53.48:426,53,0	1/1:15,0:14:5.74:35,6,0	1/1:28,0:24:47.01:357,47,0	./.	1/1:19,0:19:2.88:27,3,0	1/1:19,0:17:5.96:54,6,0	1/1:17,0:17:6:53,6,0	0/0:20,0:19:19.78:0,20,331	0/0:13,0:12:19.86:0,20,136	0/0:8,0:8:18.02:0,18,92
chr10	23382307	.	G	GA	1147.40	PASS	AC=10;AF=0.192;AN=52;BaseQRankSum=-3.699;DP=190;FS=40.616;HRun=1;HaplotypeScore=20.0884;InbreedingCoeff=0.7456;MQ=37.30;MQ0=16;MQRankSum=4.533;QD=22.07;ReadPosRankSum=-0.581;VQSLOD=1.0092;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:10:24.02:0,24,265	0/0:2,0:1:3:0,3,27	./.	./.	0/0:7,0:6:14.99:0,15,179	0/0:2,0:2:6.02:0,6,77	0/0:4,0:4:12.04:0,12,143	0/0:16,0:13:39.01:0,39,435	0/0:3,0:2:5.98:0,6,59	0/0:4,0:3:9.03:0,9,116	0/0:7,0:6:15.04:0,15,181	0/0:5,0:4:12.04:0,12,154	0/0:6,0:5:12.04:0,12,154	0/0:6,0:3:6.02:0,6,78	0/0:9,0:5:15.04:0,15,182	0/0:8,0:6:17.99:0,18,197	1/1:6,7:11:20.18:280,20,0	1/1:4,4:5:15.02:181,15,0	1/1:2,5:7:15.02:181,15,0	1/1:3,7:9:21.01:246,21,0	1/1:6,8:14:36.01:422,36,0	0/0:7,0:6:15.05:0,15,193	0/0:6,0:4:12.03:0,12,142	0/0:7,0:6:14.75:0,15,145	0/0:3,0:2:3.01:0,3,39	0/0:7,0:3:6.02:0,6,77	0/0:14,0:5:9.03:0,9,115	0/0:4,0:3:6.02:0,6,77
chr10	23382382	.	T	TA	7877.83	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-1.840;DP=375;FS=14.490;HRun=7;HaplotypeScore=39.8428;InbreedingCoeff=0.9688;MQ=58.76;MQ0=3;MQRankSum=0.712;QD=30.07;ReadPosRankSum=2.868;VQSLOD=3.7274;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,16:18:42.13:507,42,0	1/1:0,10:10:24.07:289,24,0	0/0:10,0:9:27.04:0,27,260	0/0:4,0:4:12.01:0,12,113	1/1:3,17:20:51.16:616,51,0	1/1:3,9:12:27.08:326,27,0	1/1:0,5:5:15.05:181,15,0	0/0:26,0:25:57.08:0,57,551	1/1:0,9:9:27.08:326,27,0	1/1:1,6:7:18.06:217,18,0	1/1:2,10:12:27.08:326,27,0	1/1:1,12:13:33.10:398,33,0	1/1:1,12:13:33.10:399,33,0	1/1:1,10:11:27.08:326,27,0	0/0:14,1:15:5.82:0,6,340	0/0:14,0:14:36.05:0,36,348	1/1:2,17:18:51.12:601,51,0	1/1:3,12:13:33.66:431,34,0	1/1:3,15:17:45.10:524,45,0	1/1:1,16:16:45.14:543,45,0	1/1:1,11:12:33.06:382,33,0	1/1:3,14:17:42.13:507,42,0	1/1:2,10:12:30.09:362,30,0	1/1:3,10:12:30.09:362,30,0	1/1:1,8:9:21.06:253,21,0	0/0:23,0:23:66.11:0,66,637	0/0:15,0:15:39.06:0,39,376	0/0:6,0:6:18.03:0,18,174
chr10	23382892	.	TA	T	7725.43	PASS	AB=1.000;AC=32;AF=0.571;AN=56;BaseQRankSum=-4.755;DP=627;FS=0.000;HRun=9;HaplotypeScore=75.2147;InbreedingCoeff=0.8490;MQ=75.54;MQ0=0;MQRankSum=0.208;QD=18.93;ReadPosRankSum=0.801;VQSLOD=5.0018;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,34:35:90.05:823,90,0	1/1:3,9:12:24.01:220,24,0	0/0:23,0:18:12.89:0,13,144	0/0:13,0:12:9.37:0,9,107	1/1:2,30:32:89.89:797,90,0	1/1:4,29:33:81.04:741,81,0	1/1:2,14:16:36.02:329,36,0	0/1:31,0:31:9.11:9,0,187	1/1:3,12:15:39.02:355,39,0	1/1:7,27:34:80.99:733,81,0	1/1:1,22:23:51.01:466,51,0	1/1:2,11:13:24.01:220,24,0	1/1:5,21:26:68.05:605,68,0	1/1:3,30:33:66.03:604,66,0	0/0:27,0:27:66.74:0,67,320	0/0:17,0:17:19.05:0,19,167	0/0:12,0:12:33.10:0,33,381	0/0:14,0:14:30.04:0,30,321	0/0:31,1:32:53.78:0,54,869	0/0:26,0:26:66.19:0,66,756	0/0:11,0:11:29.44:0,29,312	1/1:1,21:22:62.87:549,63,0	1/1:3,24:27:63.03:576,63,0	1/1:0,8:8:24.01:219,24,0	1/1:1,18:19:48.02:439,48,0	0/1:29,0:29:40.59:41,0,226	0/0:29,0:29:46.47:0,46,327	0/0:14,0:14:39.21:0,39,198
chr10	23383730	.	A	AC	25417.04	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-3.743;DP=636;FS=5.750;HRun=0;HaplotypeScore=72.7214;InbreedingCoeff=0.9942;MQ=88.57;MQ0=0;MQRankSum=-10.780;QD=43.08;ReadPosRankSum=6.040;VQSLOD=4.9597;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,13:14:36.12:560,36,0	1/1:1,9:10:24.08:384,24,0	0/0:30,0:30:84.01:0,84,1109	0/0:16,0:16:33.21:0,33,574	1/1:0,30:30:75.25:1172,75,0	1/1:0,31:31:84.29:1342,84,0	1/1:0,22:22:66.23:1055,66,0	1/1:0,41:41:99:1852,120,0	1/1:1,18:19:48.16:767,48,0	1/1:1,30:31:93.27:1450,93,0	1/1:0,27:27:78.27:1246,78,0	1/1:0,17:17:45.02:719,45,0	1/1:0,21:21:57.19:911,57,0	1/1:0,19:19:54.18:863,54,0	1/1:0,30:30:84.29:1342,84,0	1/1:0,27:27:75.26:1199,75,0	1/1:0,20:20:42.14:671,42,0	1/1:0,14:14:33.11:526,33,0	1/1:0,18:18:54.17:833,54,0	1/1:0,28:28:81.22:1251,81,0	1/1:0,10:10:30.10:480,30,0	1/1:0,28:28:75.26:1199,75,0	1/1:0,31:31:81.04:1294,81,0	1/1:0,15:15:45.15:719,45,0	1/1:0,14:14:39.13:623,39,0	1/1:0,26:26:78.27:1245,78,0	1/1:1,36:38:90.31:1426,90,0	1/1:0,9:9:18.06:288,18,0
chr10	23384696	.	ATT	A	9073.86	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=15.490;DP=596;FS=4.156;HRun=9;HaplotypeScore=122.4665;InbreedingCoeff=0.9926;MQ=69.33;MQ0=0;MQRankSum=-0.670;QD=29.75;ReadPosRankSum=3.107;VQSLOD=4.4269;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:64.46:0,64,1037	1/1:0,10:10:30.09:349,30,0	0/0:8,0:8:18.06:0,18,295	0/0:12,0:12:12.49:0,12,346	1/1:0,37:37:99:1191,105,0	1/1:2,24:26:69.13:787,69,0	1/1:3,18:21:45.04:506,45,0	0/0:40,0:40:99:0,99,1586	1/1:0,17:17:42.12:489,42,0	1/1:2,25:27:78.18:882,78,0	1/1:2,16:18:42.03:469,42,0	1/1:1,11:12:30.02:332,30,0	1/1:1,29:30:80.97:888,81,0	1/1:3,25:28:75.15:856,75,0	0/0:24,0:24:69.23:0,69,1103	0/0:16,0:16:48.16:0,48,780	0/0:18,0:19:51.17:0,51,817	0/0:5,0:5:15.05:0,15,246	0/0:32,0:32:72.25:0,72,1173	0/0:35,0:35:99:0,99,1615	0/0:12,0:12:33.09:0,33,491	1/1:0,17:17:51.15:594,51,0	1/1:5,27:32:78.14:891,78,0	1/1:0,14:14:30.08:350,30,0	1/1:1,15:16:42.12:489,42,0	0/0:27,0:27:78.27:0,78,1278	0/0:23,0:23:69.24:0,69,1131	0/0:13,0:13:36.12:0,36,591
chr10	23385049	.	C	CT	2713.46	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-12.137;DP=517;FS=2.553;HRun=9;HaplotypeScore=71.3871;InbreedingCoeff=0.9747;MQ=69.31;MQ0=0;MQRankSum=0.610;QD=25.84;ReadPosRankSum=-1.531;VQSLOD=3.7633;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:2,14:16:39.11:432,39,0	0/0:10,0:10:26.97:0,27,230	0/0:5,0:6:8.74:0,9,64	0/0:9,0:8:16.82:0,17,119	0/0:39,0:40:89.96:0,90,781	0/0:25,0:25:71.98:0,72,625	0/0:8,0:8:17.97:0,18,152	0/0:29,0:29:68.96:0,69,597	0/0:14,0:14:35.98:0,36,312	0/0:23,0:23:62.31:0,62,522	0/0:27,0:27:68.97:0,69,596	0/0:18,0:18:47.97:0,48,413	0/0:20,0:20:53.98:0,54,469	0/0:26,0:26:70.72:0,71,616	0/0:19,0:19:47.97:0,48,413	0/0:15,0:15:44.99:0,45,391	1/1:1,9:10:24.06:265,24,0	1/1:2,9:11:24.02:251,24,0	1/1:1,18:19:54.15:597,54,0	1/1:5,38:43:91.23:1221,91,0	1/1:2,4:6:12.03:133,12,0	0/0:20,0:20:50.96:0,51,438	0/0:20,0:20:56.87:0,57,479	0/0:11,0:11:29.99:0,30,260	0/0:15,0:15:38.89:0,39,328	0/0:15,0:15:41.98:0,42,365	0/0:34,0:33:95.98:0,96,833	0/0:8,0:8:17.98:0,18,156
chr10	23385344	.	TTG	T	4066.24	PASS	AB=1.000;AC=43;AF=0.796;AN=54;BaseQRankSum=2.680;DP=690;FS=32.320;HRun=0;HaplotypeScore=192.3178;InbreedingCoeff=0.4101;MQ=63.43;MQ0=7;MQRankSum=-3.152;QD=7.42;ReadPosRankSum=2.400;VQSLOD=1.5370;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:16,35:51:69.04:787,69,0	1/1:10,0:10:8.29:37,8,0	0/0:33,0:19:12.02:0,12,147	0/0:45,0:33:42.76:0,43,492	0/0:34,0:34:2.99:0,3,24	1/1:27,0:27:33.31:151,33,0	0/1:18,0:18:5.94:6,0,19	1/1:13,14:26:34.91:392,35,0	1/1:25,0:25:17.64:153,18,0	1/1:37,0:37:18.90:146,19,0	1/1:25,0:25:8.05:35,8,0	1/1:19,0:19:33.52:153,34,0	1/1:24,0:25:41.81:190,42,0	1/1:20,0:20:22.08:98,22,0	1/1:5,19:24:39.12:462,39,0	1/1:8,14:22:33.10:391,33,0	1/1:21,0:21:2.53:13,3,0	0/1:17,0:17:4.18:4,0,47	0/1:23,0:21:28.61:63,0,29	1/1:24,0:24:2.37:12,2,0	./.	1/1:17,0:17:2.80:13,3,0	0/1:15,0:15:6.49:6,0,17	0/1:24,0:24:2.45:2,0,46	1/1:21,0:21:11.19:51,11,0	1/1:10,14:24:44.90:495,45,0	1/1:5,18:23:29.76:334,30,0	1/1:2,6:8:6.02:71,6,0
chr10	23385360	.	GTGTGTGTA	G	8605.03	PASS	AB=0.643;AC=35;AF=0.625;AN=56;BaseQRankSum=9.173;DP=723;FS=0.917;HRun=0;HaplotypeScore=212.2196;InbreedingCoeff=0.5514;MQ=49.73;MQ0=16;MQRankSum=-8.015;QD=18.12;ReadPosRankSum=2.674;VQSLOD=3.6648;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:50:41.44:0,41,1652	1/1:0,8:8:9.03:244,9,0	0/0:37,0:9:17.62:0,18,210	0/0:50,0:23:33.48:0,33,638	0/1:4,26:30:0:0,0,0	0/1:2,25:27:0.64:952,0,1	1/1:3,16:19:3.01:80,3,0	0/0:31,0:29:13.78:0,14,654	1/1:3,21:24:42.14:1141,42,0	1/1:2,32:34:69.30:1319,69,0	1/1:0,26:26:11.72:277,12,0	1/1:0,22:22:39.07:996,39,0	1/1:3,26:29:48.16:1251,48,0	1/1:1,20:21:23.98:647,24,0	0/0:23,0:23:48.14:0,48,975	0/0:24,0:24:51.11:0,51,1022	1/1:6,20:26:2.66:81,3,0	0/1:10,14:24:82.35:82,0,167	1/1:6,15:19:44.14:790,44,0	1/1:1,24:25:2.12:80,2,0	1/1:5,30:34:2.80:13,3,0	1/1:0,21:21:6.02:118,6,0	1/1:2,13:15:5.55:102,6,0	0/1:7,21:28:65.18:74,0,65	1/1:2,16:18:12.04:326,12,0	0/1:21,1:22:33.85:34,0,1160	0/0:22,0:22:39.08:0,39,727	0/0:8,0:8:12.02:0,12,235
chr10	23385941	.	G	GTTTT	11614.77	PASS	AB=0.982;AC=38;AF=0.679;AN=56;BaseQRankSum=11.479;DP=606;FS=5.416;HRun=5;HaplotypeScore=230.1378;InbreedingCoeff=0.5026;MQ=47.56;MQ0=6;MQRankSum=-4.606;QD=23.75;ReadPosRankSum=-0.315;VQSLOD=0.2214;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:23:30.39:0,30,389	1/1:16,5:20:58.07:856,58,0	0/0:28,0:21:35.13:0,35,429	0/0:13,0:7:8.69:0,9,146	1/1:21,5:28:64.86:870,65,0	1/1:6,4:12:5.18:407,5,0	1/1:15,0:15:7.14:262,7,0	0/1:23,0:17:2.08:219,0,2	1/1:14,4:18:35.95:502,36,0	1/1:17,6:24:51.84:706,52,0	1/1:24,6:31:64.31:876,64,0	1/1:17,2:19:39.45:482,39,0	1/1:16,3:18:51.02:660,51,0	1/1:14,2:17:33.40:430,33,0	0/1:30,0:29:2.18:479,0,2	0/1:22,0:22:52.62:423,0,53	0/0:13,0:13:3.75:0,4,207	0/0:8,0:6:1.81:0,2,37	0/1:26,0:23:3.46:3,0,378	0/0:31,0:31:34.49:0,34,619	0/1:10,0:10:4.39:4,0,55	1/1:18,7:25:53.49:876,53,0	1/1:19,7:25:67.62:895,68,0	1/1:16,2:16:30.58:410,31,0	1/1:17,7:24:51.91:787,52,0	1/1:31,0:27:28.95:656,29,0	0/1:34,0:35:38.17:739,0,38	1/1:7,0:7:8.98:72,9,0
chr10	23385945	.	TTG	T	8544.51	PASS	AB=0.844;AC=36;AF=0.643;AN=56;BaseQRankSum=10.291;DP=589;FS=0.784;HRun=0;HaplotypeScore=203.7259;InbreedingCoeff=0.5982;MQ=48.28;MQ0=6;MQRankSum=-5.290;QD=19.12;ReadPosRankSum=0.257;VQSLOD=4.9506;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:21:11.99:0,12,523	1/1:15,6:20:55.48:502,55,0	0/0:27,0:20:48.41:0,48,557	0/0:14,0:7:5.25:0,5,133	1/1:20,8:27:49.30:580,49,0	1/1:7,4:11:32.54:303,33,0	1/1:3,13:15:21.77:393,22,0	0/1:17,4:14:5.57:217,0,6	1/1:12,6:18:38.60:366,39,0	1/1:16,8:23:58.09:605,58,0	1/1:21,9:30:54.96:648,55,0	1/1:12,8:19:19.64:427,20,0	1/1:10,10:18:38.32:494,38,0	1/1:12,7:18:25.62:340,26,0	0/1:23,7:29:32.32:475,0,32	0/1:19,4:22:55.37:341,0,55	0/0:13,0:13:9.04:0,9,299	0/0:7,0:5:11.85:0,12,120	0/0:23,0:20:13.80:0,14,548	0/0:29,0:29:60.56:0,61,733	0/0:7,0:7:2.50:0,2,92	1/1:16,8:24:50.88:516,51,0	1/1:18,10:27:65.39:682,65,0	1/1:16,4:18:27.58:307,28,0	1/1:21,3:24:26.20:327,26,0	1/1:26,4:26:2.39:488,2,0	0/1:30,5:35:66.87:453,0,67	1/1:5,0:5:12.35:81,12,0
chr10	23385946	.	TG	T	5651.67	PASS	AB=1.000;AC=43;AF=0.768;AN=56;BaseQRankSum=11.358;DP=575;FS=11.857;HRun=1;HaplotypeScore=201.5009;InbreedingCoeff=0.6405;MQ=48.07;MQ0=6;MQRankSum=-3.610;QD=11.82;ReadPosRankSum=-0.069;VQSLOD=1.9763;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,1:21:28.57:0,29,412	1/1:20,1:20:56.52:360,57,0	0/0:27,0:19:46.77:0,47,455	0/0:12,2:7:4.72:0,5,106	1/1:27,1:27:68.09:432,68,0	1/1:11,0:11:31.38:193,31,0	1/1:16,0:15:33.37:201,33,0	1/1:18,2:13:14.62:148,15,0	1/1:15,2:17:38.06:238,38,0	1/1:24,0:23:60.54:361,61,0	1/1:26,3:29:67.44:451,67,0	1/1:17,2:18:27.13:219,27,0	1/1:20,0:18:37.83:283,38,0	1/1:18,1:18:36.50:213,37,0	1/1:29,0:28:42.85:301,43,0	1/1:23,0:22:19.11:215,19,0	0/1:13,0:13:14.05:14,0,183	0/0:6,0:4:5.58:0,6,58	0/1:22,0:19:29.68:30,0,380	0/0:28,0:28:10.55:0,11,458	0/1:7,0:7:10.01:10,0,53	1/1:23,0:23:52.67:291,53,0	1/1:28,0:27:68.88:456,69,0	1/1:19,1:18:38.11:237,38,0	1/1:21,0:21:41.90:310,42,0	1/1:29,0:25:48.39:282,48,0	1/1:33,1:34:30.67:325,31,0	1/1:5,0:5:12.35:81,12,0
chr10	23385947	.	G	GT	2695.55	PASS	AB=0.896;AC=37;AF=0.661;AN=56;BaseQRankSum=3.602;DP=573;FS=11.626;HRun=5;HaplotypeScore=209.1220;InbreedingCoeff=0.2520;MQ=47.35;MQ0=6;MQRankSum=-3.169;QD=5.66;ReadPosRankSum=1.569;VQSLOD=-0.6962;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:21:26.48:0,26,200	1/1:13,8:20:11.61:245,12,0	0/0:26,0:18:16.10:0,16,214	0/1:17,0:7:0.34:0,0,59	1/1:19,8:27:19.12:264,19,0	0/1:6,4:11:0.05:140,0,0	0/1:15,1:16:12.02:49,0,12	0/0:20,0:13:8.29:0,8,43	1/1:12,5:17:6.42:121,6,0	1/1:18,7:24:14.55:342,15,0	1/1:22,7:29:15.94:260,16,0	0/1:15,4:18:2.58:100,0,3	0/1:16,4:18:11.89:95,0,12	1/1:11,8:18:17.61:213,18,0	0/0:27,0:26:18.53:0,19,93	0/1:22,0:22:24.52:25,0,69	1/1:13,0:13:2.47:19,2,0	1/1:6,0:4:2.68:12,3,0	1/1:22,0:19:3.38:10,3,0	1/1:28,0:28:1.19:3,1,0	1/1:6,0:6:0.42:2,0,0	1/1:15,9:24:7.87:261,8,0	0/1:21,7:27:0.91:186,0,1	1/1:15,5:18:11.76:159,12,0	1/1:9,11:20:24.56:299,25,0	0/1:29,0:25:17.83:23,0,18	0/1:33,0:34:30.71:31,0,73	0/0:2,0:2:2.49:0,2,6
chr10	23385949	.	T	TGG	2251.63	PASS	AB=0.881;AC=10;AF=0.179;AN=56;BaseQRankSum=11.634;DP=568;FS=0.792;HRun=0;HaplotypeScore=215.1681;InbreedingCoeff=-0.2186;MQ=48.15;MQ0=8;MQRankSum=-3.783;QD=10.10;ReadPosRankSum=7.700;VQSLOD=3.0499;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:22:39.10:0,39,518	0/0:18,0:17:11.58:0,12,231	0/0:29,0:19:35.25:0,35,541	0/0:18,0:7:11.43:0,11,168	0/0:22,0:27:13.07:0,13,260	0/1:12,0:12:3.55:4,0,101	0/0:17,0:16:34.02:0,34,183	0/1:15,3:13:93.13:181,0,93	0/0:14,0:16:3.70:0,4,143	0/0:19,0:25:20.02:0,20,314	0/0:26,0:27:1.53:0,2,283	0/0:19,0:19:31.32:0,31,261	0/1:20,0:18:5.68:6,0,127	0/0:18,0:18:19.80:0,20,240	0/1:19,8:26:99:425,0,249	0/1:16,5:21:99:371,0,192	0/0:13,0:13:33.06:0,33,418	0/0:7,0:5:12.02:0,12,147	0/0:22,0:18:51.15:0,51,684	0/0:27,0:27:66.22:0,66,911	0/0:5,0:5:15.04:0,15,191	0/1:24,0:24:3.54:4,0,157	0/0:28,0:27:6.98:0,7,258	0/1:18,0:17:4.55:5,0,158	0/1:18,0:19:5.08:5,0,175	0/1:14,14:24:99:751,0,106	0/1:21,12:33:99:628,0,320	0/0:2,0:2:6.01:0,6,60
chr10	23385950	.	TTTG	T	1955.63	PASS	AB=0.980;AC=27;AF=0.482;AN=56;BaseQRankSum=-5.510;DP=565;FS=2.160;HRun=0;HaplotypeScore=218.4532;InbreedingCoeff=-0.7202;MQ=47.71;MQ0=10;MQRankSum=3.220;QD=3.70;ReadPosRankSum=-11.144;VQSLOD=-0.0449;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:23,1:23:16.80:17,0,212	0/1:18,0:17:59.69:60,0,86	0/0:30,0:18:18.59:0,19,317	0/1:18,0:7:5.91:6,0,100	0/1:27,1:27:10.28:263,0,10	0/1:13,0:12:28.57:78,0,29	0/1:16,1:16:13.89:22,0,14	0/1:17,2:13:9.92:63,0,10	0/1:16,0:16:40.54:100,0,41	0/1:25,1:25:70.18:206,0,70	0/1:27,0:27:63.54:229,0,64	0/1:18,1:18:63.33:139,0,63	0/1:20,0:18:35.61:36,0,43	0/1:16,1:16:48.54:103,0,49	0/1:25,2:26:61.39:141,0,61	0/1:22,0:21:20:20,0,89	0/1:13,0:13:22.48:22,0,91	0/0:7,0:5:6.80:0,7,60	0/1:21,0:17:5.66:6,0,182	0/1:27,0:27:42.93:43,0,249	0/1:5,0:5:20.44:20,0,37	0/1:23,0:23:18.87:19,0,92	0/1:26,0:25:52.86:116,0,53	0/1:19,0:17:0.38:153,0,0	0/1:19,0:19:68.17:82,0,68	0/1:26,1:24:12.70:13,0,38	0/1:32,1:33:25.95:26,0,164	1/1:3,0:3:9.02:125,9,0
chr10	23385951	.	TTG	T	2670.59	PASS	AB=0.978;AC=39;AF=0.696;AN=56;BaseQRankSum=1.233;DP=564;FS=5.803;HRun=0;HaplotypeScore=208.7806;InbreedingCoeff=-0.2114;MQ=46.49;MQ0=10;MQRankSum=-0.879;QD=5.00;ReadPosRankSum=-7.590;VQSLOD=0.4372;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:21:46.59:47,0,144	0/1:17,1:17:16.06:47,0,16	0/0:30,0:18:24.94:0,25,265	0/1:19,0:7:7.17:7,0,74	1/1:26,1:26:36.52:202,37,0	1/1:13,0:12:16.34:116,16,0	1/1:18,0:17:29.60:115,30,0	1/1:19,0:13:7.49:85,7,0	1/1:15,1:16:11.01:85,11,0	1/1:26,0:25:32.17:229,32,0	0/1:25,3:28:1.70:246,0,2	1/1:17,2:18:5.66:132,6,0	1/1:20,0:18:10:83,10,0	0/1:16,1:16:0.92:94,0,1	0/1:27,0:26:22.13:163,0,22	0/1:20,2:21:26.45:157,0,26	0/1:13,0:13:40.22:40,0,58	0/1:7,0:5:10.70:11,0,29	0/1:19,0:15:20.63:21,0,90	0/1:27,0:27:59.10:59,0,143	0/1:5,0:5:21.66:23,0,22	1/1:23,0:23:5.33:58,5,0	1/1:25,0:25:19.12:169,19,0	1/1:19,0:17:15.10:142,15,0	0/1:19,0:19:3.41:62,0,3	0/1:27,1:24:5.17:177,0,5	0/1:33,0:33:83.93:143,0,84	1/1:4,0:4:12.01:115,12,0
chr10	23385952	.	TG	T	4532.60	PASS	AB=0.935;AC=52;AF=0.929;AN=56;BaseQRankSum=2.943;DP=560;FS=8.709;HRun=1;HaplotypeScore=194.2157;InbreedingCoeff=0.3536;MQ=46.33;MQ0=12;MQRankSum=-4.569;QD=8.54;ReadPosRankSum=0.848;VQSLOD=1.7653;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:19,2:20:47.52:48,0,85	1/1:18,0:17:27.46:150,27,0	0/0:28,1:17:4.12:0,4,184	0/1:21,1:7:8.39:8,0,50	1/1:27,0:26:51.70:244,52,0	1/1:13,0:12:26.59:148,27,0	1/1:17,0:16:30.18:122,30,0	1/1:20,0:14:30.16:191,30,0	1/1:16,0:16:19:103,19,0	1/1:26,0:25:56.82:253,57,0	1/1:27,1:28:47.83:289,48,0	1/1:19,0:18:35.30:194,35,0	1/1:20,0:18:24.22:119,24,0	1/1:17,0:16:33.85:158,34,0	1/1:27,0:26:44.10:266,44,0	1/1:22,0:21:39.79:248,40,0	1/1:12,0:12:13.84:77,14,0	1/1:7,0:5:8.09:40,8,0	1/1:19,0:15:25.70:129,26,0	1/1:27,0:27:35.73:210,36,0	1/1:5,0:5:9.72:49,10,0	1/1:22,0:22:41.77:162,42,0	1/1:25,0:24:56.30:256,56,0	1/1:19,0:17:28.20:155,28,0	1/1:19,0:19:39.78:184,40,0	1/1:26,0:22:46.45:320,46,0	1/1:33,0:33:20.25:309,20,0	1/1:4,0:4:11.99:103,12,0
chr10	23385953	.	G	GTT	5837.10	PASS	AB=0.969;AC=48;AF=0.857;AN=56;BaseQRankSum=2.575;DP=564;FS=12.824;HRun=12;HaplotypeScore=198.5647;InbreedingCoeff=0.2667;MQ=47.36;MQ0=12;MQRankSum=-1.747;QD=11.40;ReadPosRankSum=-2.320;VQSLOD=0.7080;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,1:21:13.61:144,14,0	1/1:10,8:17:30.01:338,30,0	0/0:28,0:17:13.29:0,13,104	0/0:21,0:7:6.65:0,7,38	1/1:20,6:26:43.96:433,44,0	1/1:8,4:12:11.72:257,12,0	1/1:16,1:16:10.53:100,11,0	0/1:20,0:14:5.09:111,0,5	1/1:11,4:16:21.02:249,21,0	1/1:17,7:25:47.84:563,48,0	1/1:22,5:28:42.77:457,43,0	1/1:15,3:18:22.25:233,22,0	1/1:11,9:19:18:219,18,0	1/1:11,5:16:24.87:256,25,0	0/1:27,0:26:15.03:172,0,15	0/1:21,0:21:52.38:121,0,52	1/1:12,0:12:2.96:20,3,0	1/1:7,0:5:3.18:24,3,0	1/1:19,0:15:3.31:17,3,0	1/1:27,0:27:2.19:7,2,0	1/1:5,0:5:3.27:14,3,0	1/1:10,12:22:30.10:405,30,0	1/1:18,6:24:37.42:424,37,0	1/1:12,3:17:26.76:268,27,0	1/1:8,9:19:37.87:438,38,0	1/1:25,0:22:10.71:233,11,0	0/1:31,0:34:22.90:259,0,23	1/1:4,0:4:10.53:75,11,0
chr10	23386495	.	A	AT	8683.64	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=3.967;DP=596;FS=8.781;HRun=7;HaplotypeScore=71.0601;InbreedingCoeff=0.9992;MQ=57.45;MQ0=3;MQRankSum=6.203;QD=30.79;ReadPosRankSum=1.959;VQSLOD=4.9968;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:66.07:0,66,625	1/1:0,10:10:27.08:326,27,0	0/0:21,0:16:39.04:0,39,369	0/0:20,0:15:32.96:0,33,310	1/1:1,30:31:82.49:981,82,0	1/1:4,24:28:66.20:797,66,0	1/1:2,10:12:27.08:326,27,0	0/0:33,0:33:96.15:0,96,923	1/1:2,23:25:43.24:796,43,0	1/1:3,12:15:36.11:435,36,0	1/1:1,34:35:99:1195,99,0	1/1:3,15:18:45.14:544,45,0	1/1:2,13:15:39.12:471,39,0	1/1:1,15:16:38.95:471,39,0	0/0:18,0:18:51.06:0,51,486	0/0:22,0:22:57.08:0,57,550	0/0:28,0:28:75.12:0,75,724	0/0:17,0:18:44.10:0,44,411	0/0:12,0:10:24.04:0,24,232	0/0:41,0:41:99:0,114,1100	0/0:14,0:14:39.01:0,39,362	1/1:3,22:25:66.20:797,66,0	1/1:2,23:25:60.18:712,60,0	1/1:0,11:11:30.09:362,30,0	1/1:0,15:15:39.12:471,39,0	0/0:22,0:22:57.09:0,57,550	0/0:27,0:27:72.11:0,72,695	0/0:12,0:12:36.06:0,36,348
chr10	23386777	.	TG	T	956.78	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=8.309;DP=639;FS=0.732;HRun=1;HaplotypeScore=62.3652;InbreedingCoeff=0.9834;MQ=58.68;MQ0=3;MQRankSum=4.049;QD=29.90;ReadPosRankSum=1.360;VQSLOD=3.3885;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:78.24:0,78,1222	0/0:9,0:9:27.09:0,27,430	0/0:25,0:17:51.17:0,51,815	0/0:10,1:6:15.05:0,15,224	1/1:0,32:32:81.26:1052,81,0	0/0:25,0:25:75.26:0,75,1196	0/0:18,0:18:54.18:0,54,858	0/0:31,0:29:87.29:0,87,1358	0/0:19,0:19:54.18:0,54,863	0/0:32,0:32:93.32:0,93,1486	0/0:23,0:23:69.24:0,69,1103	0/0:27,0:27:81.27:0,81,1271	0/0:25,0:25:75.26:0,75,1193	0/0:15,0:15:45.15:0,45,715	0/0:21,0:21:63.21:0,63,1005	0/0:24,0:24:72.25:0,72,1149	0/0:26,0:26:75.21:0,75,1163	0/0:30,0:30:90.31:0,90,1439	0/0:22,0:20:51.17:0,51,812	0/0:35,0:35:99:0,105,1679	0/0:17,0:16:51.17:0,51,815	0/0:32,0:32:96.33:0,96,1529	0/0:20,0:19:57.19:0,57,911	0/0:21,0:21:60.20:0,60,959	0/0:17,0:17:48.16:0,48,767	0/0:23,0:22:69.22:0,69,1078	0/0:17,0:16:51.17:0,51,807	0/0:13,0:13:39.13:0,39,624
chr10	23387799	.	TA	T	4398.15	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=12.290;DP=750;FS=3.923;HRun=1;HaplotypeScore=70.9553;InbreedingCoeff=0.9992;MQ=66.84;MQ0=2;MQRankSum=1.022;QD=37.92;ReadPosRankSum=0.860;VQSLOD=5.4306;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:81.25:0,81,1266	0/0:20,0:20:57.18:0,57,888	0/0:27,0:21:63.13:0,63,904	0/0:25,0:15:23.49:0,23,603	0/0:37,0:37:99:0,102,1626	0/0:28,0:28:84.29:0,84,1336	0/0:23,0:22:66.16:0,66,1000	0/0:40,0:40:99:0,120,1897	0/0:39,0:39:99:0,117,1774	0/0:30,0:31:90.26:0,90,1376	0/0:24,0:24:72.25:0,72,1143	0/0:29,0:29:87.24:0,87,1339	0/0:25,0:25:75.21:0,75,1130	0/0:34,0:34:99:0,102,1630	0/0:30,0:30:90.31:0,90,1438	0/0:21,0:21:63.18:0,63,958	1/1:1,22:23:66.17:899,66,0	1/1:0,19:19:51.13:690,51,0	1/1:0,17:16:48.16:671,48,0	1/1:0,35:35:99:1384,99,0	1/1:0,22:22:54.18:755,54,0	0/0:29,0:29:87.27:0,87,1335	0/0:29,0:29:87.28:0,87,1365	0/0:23,0:23:66.23:0,66,1054	0/0:27,0:27:81.15:0,81,1239	0/0:17,0:17:51.17:0,51,795	0/0:36,0:36:99:0,108,1724	0/0:9,0:9:27.09:0,27,431
chr10	23388232	.	CAAG	C	18255.91	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=13.728;DP=605;FS=4.430;HRun=0;HaplotypeScore=110.4358;InbreedingCoeff=0.9499;MQ=54.54;MQ0=14;MQRankSum=-1.699;QD=37.80;ReadPosRankSum=3.749;VQSLOD=5.9903;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,37:37:84.29:1332,84,0	1/1:0,9:9:27.09:428,27,0	0/0:11,0:3:6.02:0,6,131	0/0:9,0:2:6.02:0,6,131	1/1:1,38:38:99:1547,102,0	1/1:3,18:21:45.15:703,45,0	1/1:2,17:19:39.13:618,39,0	1/1:7,14:19:38.97:467,39,0	1/1:1,21:22:45.15:713,45,0	1/1:3,34:37:99:1595,102,0	1/1:1,18:19:51.17:809,51,0	1/1:1,19:20:54.18:856,54,0	1/1:3,22:25:60.20:934,60,0	1/1:0,23:23:60.20:951,60,0	1/1:1,21:22:57.19:904,57,0	1/1:2,24:26:63.21:999,63,0	0/0:26,1:27:23.72:0,24,1390	0/0:10,0:10:30.10:0,30,656	0/0:18,0:15:45.14:0,45,898	0/0:30,0:30:84.27:0,84,1725	0/0:17,0:17:45.15:0,45,945	1/1:2,18:20:57.19:900,57,0	1/1:4,22:26:63.21:998,63,0	1/1:2,23:25:48.63:762,49,0	1/1:1,18:19:51.17:792,51,0	1/1:2,21:23:63.17:906,63,0	1/1:3,23:26:57.19:900,57,0	1/1:0,4:4:9.03:143,9,0
chr10	23388372	.	C	CAT	24723.95	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-4.644;DP=640;FS=0.739;HRun=0;HaplotypeScore=93.1893;InbreedingCoeff=0.9963;MQ=69.22;MQ0=5;MQRankSum=-4.181;QD=40.73;ReadPosRankSum=5.222;VQSLOD=6.4335;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,23:25:57.20:987,57,0	1/1:1,9:11:23.88:416,24,0	0/0:21,0:20:48.15:0,48,639	0/0:12,0:12:30:0,30,348	1/1:2,30:32:72.23:1219,72,0	1/1:1,23:25:60.21:1039,60,0	1/1:3,14:18:42.14:727,42,0	1/1:6,26:29:69.24:1188,69,0	1/1:2,17:19:42.14:727,42,0	1/1:4,19:24:57.18:961,57,0	1/1:4,17:21:36.12:624,36,0	1/1:1,21:23:60.21:1039,60,0	1/1:4,20:24:54.18:935,54,0	1/1:5,16:20:51.17:883,51,0	1/1:3,31:34:81.28:1403,81,0	1/1:3,26:28:69.24:1180,69,0	1/1:4,23:28:66.23:1143,66,0	1/1:2,14:16:36.12:623,36,0	1/1:4,16:20:51.17:867,51,0	1/1:4,25:29:63.22:1090,63,0	1/1:1,24:25:69.24:1195,69,0	1/1:1,26:26:69.24:1191,69,0	1/1:4,12:16:35.82:618,36,0	1/1:3,14:18:39.13:675,39,0	1/1:2,30:32:81.28:1403,81,0	1/1:1,23:27:75.23:1243,75,0	1/1:1,22:22:57.20:987,57,0	1/1:0,8:8:21.07:364,21,0
chr10	23388884	.	T	TA	10049.42	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-3.742;DP=375;FS=3.198;HRun=7;HaplotypeScore=57.7375;InbreedingCoeff=0.8127;MQ=57.83;MQ0=3;MQRankSum=-2.454;QD=29.13;ReadPosRankSum=2.862;VQSLOD=5.5396;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:30.05:0,30,289	1/1:1,7:8:15.05:181,15,0	0/0:10,0:6:15:0,15,137	0/0:10,0:7:0.02:0,0,70	1/1:4,27:31:81.25:979,81,0	1/1:1,13:14:39.12:470,39,0	1/1:0,11:10:30.09:362,30,0	1/1:5,3:6:11.53:116,12,0	1/1:3,8:11:21.06:254,21,0	1/1:3,19:22:60.18:722,60,0	1/1:2,12:14:36.08:419,36,0	1/1:2,14:16:39.12:471,39,0	1/1:2,8:10:18.06:217,18,0	1/1:1,12:13:36.11:434,36,0	1/1:3,7:9:23.44:261,23,0	1/1:5,7:12:20.69:226,21,0	1/1:1,15:16:36.11:435,36,0	1/1:2,6:8:4.18:167,4,0	1/1:4,9:12:30.09:361,30,0	1/1:0,26:26:75.23:906,75,0	1/1:0,6:6:18.06:217,18,0	1/1:2,12:14:36.03:402,36,0	1/1:0,15:15:45.14:544,45,0	1/1:1,10:11:27.08:326,27,0	1/1:1,17:17:48.15:580,48,0	1/1:5,15:19:46.87:529,47,0	1/1:5,7:12:24.96:288,25,0	1/1:1,5:6:15.05:181,15,0
chr10	23388898	.	TA	T	950.99	PASS	AB=0.709;AC=6;AF=0.107;AN=56;BaseQRankSum=0.223;DP=406;FS=0.000;HRun=6;HaplotypeScore=104.3814;InbreedingCoeff=-0.0042;MQ=58.76;MQ0=2;MQRankSum=-9.532;QD=9.80;ReadPosRankSum=-1.565;VQSLOD=1.0001;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:24.04:0,24,285	0/0:8,0:8:24.08:0,24,316	0/0:8,0:7:21.06:0,21,259	0/0:8,0:6:18.06:0,18,235	0/0:31,0:31:90.28:0,90,1169	0/0:14,0:14:39.11:0,39,496	0/0:15,0:14:42.12:0,42,526	0/1:9,5:12:7.57:139,0,8	0/0:10,0:10:24.08:0,24,315	0/0:25,0:25:69.21:0,69,894	0/0:14,0:14:42.14:0,42,553	0/0:16,0:16:45.13:0,45,564	0/0:7,0:7:18.06:0,18,237	0/0:13,0:13:30.10:0,30,394	0/1:8,8:15:23.55:220,0,24	0/1:8,6:14:5.97:141,0,6	0/0:15,0:15:39.13:0,39,513	0/0:9,0:9:21.03:0,21,257	0/0:14,0:13:36.10:0,36,452	0/0:25,0:25:75.22:0,75,969	0/0:5,0:5:15.05:0,15,197	0/0:14,0:14:42.12:0,42,538	0/0:14,0:14:42.14:0,42,553	0/0:10,0:10:27.09:0,27,355	0/0:24,0:23:72.22:0,72,934	0/1:12,14:24:58.74:336,0,59	0/1:12,6:18:33.68:161,0,34	0/1:6,3:9:23.77:79,0,24
chr10	23390001	.	CA	C	12647.59	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=1.092;DP=539;FS=4.330;HRun=7;HaplotypeScore=55.6605;InbreedingCoeff=0.9747;MQ=69.29;MQ0=0;MQRankSum=-0.490;QD=27.49;ReadPosRankSum=-0.350;VQSLOD=5.4010;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,24:24:69.16:704,69,0	1/1:0,5:5:15.03:153,15,0	0/0:7,0:7:13.28:0,13,154	0/0:5,0:5:12.04:0,12,149	1/1:2,24:26:69.15:704,69,0	1/1:0,23:23:63.14:643,63,0	1/1:0,9:9:24.05:245,24,0	1/1:1,32:33:96.18:970,96,0	1/1:2,18:20:54.12:551,54,0	1/1:2,34:36:99:1028,102,0	1/1:2,36:38:99:1010,99,0	1/1:0,20:20:47.89:489,48,0	1/1:4,20:24:57.12:582,57,0	1/1:0,22:22:63.14:643,63,0	1/1:0,14:14:42.10:429,42,0	1/1:2,22:24:57.13:582,57,0	0/0:18,0:18:51.16:0,51,640	0/0:9,0:9:26.57:0,27,311	0/0:19,0:19:54.13:0,54,660	0/0:17,0:17:48.15:0,48,594	0/0:4,0:4:9.03:0,9,112	1/1:0,14:14:36.08:367,36,0	1/1:0,15:15:42.10:429,42,0	1/1:2,7:9:21.05:214,21,0	1/1:0,28:28:75.17:765,75,0	1/1:2,32:34:93.21:949,93,0	1/1:0,34:34:93.20:948,93,0	1/1:0,8:8:24.05:245,24,0
chr10	23390405	.	TATAC	T	2761.56	PASS	AB=1.000;AC=38;AF=0.792;AN=48;BaseQRankSum=-3.312;DP=164;FS=11.032;HRun=0;HaplotypeScore=57.9998;InbreedingCoeff=0.1863;MQ=72.10;MQ0=1;MQRankSum=-0.867;QD=19.31;ReadPosRankSum=1.746;VQSLOD=1.7712;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,0:8:12.80:53,13,0	1/1:0,1:1:3.01:57,3,0	0/0:7,0:4:2.88:0,3,8	0/1:10,0:5:7.51:8,0,11	1/1:1,7:8:15.05:282,15,0	1/1:1,6:7:15.05:283,15,0	./.	1/1:30,0:30:61.75:399,62,0	1/1:0,1:1:3.01:57,3,0	1/1:3,5:8:18.06:337,18,0	1/1:1,6:7:11.77:220,12,0	1/1:2,1:3:3.01:57,3,0	1/1:1,6:7:15.05:282,15,0	1/1:2,5:7:18.06:307,18,0	1/1:3,0:3:2.80:13,3,0	0/1:2,0:2:7.12:7,0,24	0/0:6,0:6:3.01:0,3,35	0/1:5,0:5:28.38:28,0,38	0/1:5,0:5:24.36:39,0,24	0/0:3,0:3:1.25:0,1,3	./.	./.	1/1:1,2:3:6.02:106,6,0	./.	1/1:1,4:5:6.02:113,6,0	1/1:15,0:15:16.92:133,17,0	1/1:2,0:2:2.80:13,3,0	1/1:6,0:6:16.64:95,17,0
chr10	23390407	.	TAC	T	2683.76	PASS	AB=0.917;AC=40;AF=0.833;AN=48;BaseQRankSum=-3.038;DP=154;FS=4.673;HRun=0;HaplotypeScore=50.7682;InbreedingCoeff=0.2000;MQ=70.18;MQ0=1;MQRankSum=-0.495;QD=19.31;ReadPosRankSum=0.944;VQSLOD=2.8619;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,8:8:15.05:228,15,0	1/1:1,0:1:2.98:22,3,0	0/0:6,0:3:1.47:0,1,6	0/1:10,0:5:8.50:8,0,10	1/1:7,0:7:14.91:109,15,0	1/1:7,0:7:14.91:110,15,0	./.	1/1:1,26:27:71.93:785,72,0	1/1:1,0:1:2.98:22,3,0	1/1:5,1:6:17.92:152,18,0	1/1:7,0:7:11.73:82,12,0	1/1:3,0:3:2.98:22,3,0	1/1:7,0:7:14.91:109,15,0	1/1:7,0:7:17.77:120,18,0	1/1:0,3:3:3.01:46,3,0	0/1:1,1:2:1.53:40,0,2	0/0:5,0:5:2.60:0,3,10	0/1:5,0:5:13.54:28,0,14	1/1:3,2:5:7.14:129,7,0	0/1:3,0:3:0:0,0,0	./.	./.	1/1:2,0:2:5.86:37,6,0	./.	1/1:5,0:5:5.97:44,6,0	1/1:0,15:15:36.05:426,36,0	1/1:0,2:2:3.01:46,3,0	1/1:2,4:6:18.01:227,18,0
chr10	23390409	.	C	CAT	220.06	PASS	AB=1.000;AC=13;AF=0.271;AN=48;BaseQRankSum=-2.231;DP=147;FS=1.867;HRun=0;HaplotypeScore=57.9828;InbreedingCoeff=0.5039;MQ=71.13;MQ0=1;MQRankSum=2.419;QD=5.24;ReadPosRankSum=-3.071;VQSLOD=1.8433;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,0:8:14.45:83,14,0	0/0:1,0:1:2.74:0,3,12	1/1:6,0:3:1.25:3,1,0	0/1:10,0:5:5.78:15,0,6	0/0:7,0:7:13.72:0,14,62	0/0:7,0:7:13.72:0,14,61	./.	0/0:26,0:26:11.61:0,12,71	0/0:1,0:1:2.74:0,3,12	0/0:6,0:6:16.47:0,16,74	0/0:6,0:6:8.62:0,9,39	0/0:2,0:2:2.74:0,3,12	0/0:6,0:6:13.72:0,14,61	0/0:6,0:6:5.62:0,6,34	0/0:3,0:3:2.68:0,3,11	0/0:2,0:2:5.65:0,6,31	1/1:5,0:5:3.01:30,3,0	1/1:2,3:5:9.03:125,9,0	1/1:4,1:5:11.79:98,12,0	1/1:2,1:3:1.25:3,1,0	./.	./.	0/0:2,0:2:3.22:0,3,13	./.	0/0:4,0:4:5.49:0,5,24	0/0:15,0:15:16.06:0,16,66	0/0:2,0:2:2.68:0,3,11	0/0:5,0:5:10.15:0,10,41
chr10	23390484	.	ATGTACG	A	428.89	PASS	AC=16;AF=0.615;AN=26;BaseQRankSum=-0.764;DP=71;FS=0.000;HRun=0;HaplotypeScore=24.6454;InbreedingCoeff=0.3754;MQ=94.05;MQ0=4;MQRankSum=0.538;QD=25.23;ReadPosRankSum=0.651;VQSLOD=2.8794;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:3,0:3:2.68:0,3,11	1/1:0,1:1:3.01:54,3,0	0/0:18,0:5:6.63:0,7,98	0/0:23,0:9:2.56:0,3,38	./.	./.	./.	1/1:0,5:5:15.05:242,15,0	./.	./.	1/1:1,0:1:3:25,3,0	1/1:1,1:2:3.01:48,3,0	1/1:2,0:2:3.01:56,3,0	./.	./.	1/1:1,0:1:3:25,3,0	0/0:3,0:3:1:0,1,42	1/1:4,0:4:5.01:27,5,0	./.	./.	./.	./.	./.	./.	./.	0/0:1,0:1:3:0,3,27	./.	1/1:1,0:1:3.01:54,3,0
chr10	23390488	.	ACG	A	377.71	PASS	AB=0.750;AC=21;AF=0.808;AN=26;BaseQRankSum=-1.994;DP=71;FS=0.000;HRun=0;HaplotypeScore=24.8644;InbreedingCoeff=0.2419;MQ=102.90;MQ0=4;MQRankSum=-1.294;QD=16.42;ReadPosRankSum=2.210;VQSLOD=3.1320;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,0:3:0.47:1,0,0	1/1:1,0:1:2.90:16,3,0	0/0:20,0:5:7.05:0,7,83	0/0:25,0:11:2.70:0,3,66	./.	./.	1/1:1,0:1:3.01:46,3,0	1/1:5,0:5:15:171,15,0	./.	./.	./.	1/1:1,1:2:3.01:47,3,0	1/1:2,0:2:3.01:37,3,0	./.	./.	./.	0/1:2,1:3:5.51:43,0,6	1/1:2,1:3:3.01:49,3,0	./.	./.	./.	./.	./.	./.	1/1:1,0:1:3:25,3,0	1/1:1,0:1:0.47:1,0,0	./.	1/1:1,0:1:3.01:36,3,0
chr10	23390621	.	CATATATATAT	C	894.02	PASS	AB=1.000;AC=8;AF=0.571;AN=14;BaseQRankSum=3.212;DP=98;FS=5.815;HRun=0;HaplotypeScore=66.5632;MQ=67.65;MQ0=3;MQRankSum=1.802;QD=14.66;ReadPosRankSum=2.350;VQSLOD=0.7514;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	./.	./.	./.	0/1:36,0:34:99:700,0,118	./.	./.	./.	./.	./.	./.	0/1:1,0:1:0:0,0,0	./.	1/1:6,2:8:2.99:24,3,0	./.	1/1:5,1:7:6.02:140,6,0	0/0:0,1:1:0:0,0,0	./.	./.	./.	./.	./.	0/0:3,0:3:5.38:0,5,47	1/1:8,0:9:6.01:107,6,0	./.
chr10	23390636	.	ATATATATATATATATGTGTG	A	2210.60	PASS	AB=0.788;AC=6;AF=0.375;AN=16;BaseQRankSum=1.951;DP=94;FS=2.938;HRun=0;HaplotypeScore=88.6760;MQ=49.70;MQ0=6;MQRankSum=2.190;QD=43.35;ReadPosRankSum=1.981;VQSLOD=2.5206;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	./.	./.	./.	0/1:9,25:33:99:2078,0,205	./.	./.	./.	./.	./.	./.	1/1:1,1:2:2.84:14,3,0	./.	0/1:8,0:8:14.98:15,0,94	0/0:3,0:3:2.98:0,3,22	0/0:8,0:8:15.04:0,15,420	0/0:2,0:2:0:0,0,0	./.	./.	./.	./.	./.	0/0:6,0:5:6.02:0,6,108	1/1:2,5:7:6.02:189,6,0	./.
chr10	23390683	.	C	CATATATATAT	1241.78	PASS	AB=1.000;AC=17;AF=0.708;AN=24;BaseQRankSum=2.652;DP=118;FS=5.504;HRun=0;HaplotypeScore=58.6518;InbreedingCoeff=0.2078;MQ=80.27;MQ0=4;MQRankSum=-2.910;QD=14.44;ReadPosRankSum=2.446;VQSLOD=0.6259;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:16,0:7:18.01:0,18,285	0/1:12,0:7:31.72:32,0,104	./.	./.	./.	1/1:32,0:25:62.67:694,63,0	./.	./.	./.	./.	./.	./.	1/1:3,0:3:6.02:174,6,0	1/1:3,0:3:2.97:20,3,0	1/1:7,0:7:12.04:155,12,0	1/1:4,0:4:3:29,3,0	0/1:8,0:7:19.51:40,0,20	0/0:9,0:9:2.68:0,3,11	0/1:2,0:2:0:0,0,0	./.	./.	./.	./.	1/1:4,0:3:3.01:47,3,0	1/1:2,4:9:3.01:151,3,0	./.
chr10	23390691	.	C	CATATATAT	3674.48	PASS	AB=1.000;AC=35;AF=0.875;AN=40;BaseQRankSum=1.114;DP=144;FS=1.295;HRun=0;HaplotypeScore=42.0267;InbreedingCoeff=0.2321;MQ=101.44;MQ0=4;MQRankSum=-5.596;QD=31.95;ReadPosRankSum=1.332;VQSLOD=3.0796;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:4:3.01:49,3,0	1/1:1,0:1:3:25,3,0	0/0:21,0:13:39.10:0,39,666	0/1:13,0:10:11.65:12,0,283	./.	1/1:2,0:2:5.99:48,6,0	./.	1/1:27,0:18:42.09:1209,42,0	1/1:2,0:2:5.99:48,6,0	1/1:3,0:3:9.01:84,9,0	./.	./.	./.	1/1:3,0:3:6:63,6,0	1/1:3,0:3:9.03:199,9,0	1/1:4,0:4:9.02:112,9,0	1/1:1,8:9:12.51:516,13,0	1/1:1,3:5:3.01:129,3,0	1/1:4,5:11:21.06:644,21,0	1/1:3,6:12:6.02:248,6,0	0/0:1,2:3:0:0,0,0	./.	./.	1/1:1,0:1:2.99:23,3,0	./.	1/1:4,0:3:3.01:51,3,0	1/1:8,0:8:6.02:172,6,0	1/1:2,0:2:3.01:46,3,0
chr10	23391098	.	CATCT	C	2549.86	PASS	AB=0.847;AC=40;AF=0.952;AN=42;BaseQRankSum=2.106;DP=487;FS=0.000;HRun=0;HaplotypeScore=194.2492;InbreedingCoeff=-0.1042;MQ=58.47;MQ0=2;MQRankSum=-1.549;QD=6.84;ReadPosRankSum=0.146;VQSLOD=2.4547;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:29:9.95:85,10,0	1/1:7,0:7:6.48:56,6,0	./.	./.	./.	1/1:17,0:17:12.47:108,12,0	1/1:12,0:12:3:28,3,0	./.	1/1:15,0:15:6.01:56,6,0	1/1:13,0:13:9.85:85,10,0	1/1:17,0:17:6.01:56,6,0	1/1:22,0:22:21.02:195,21,0	1/1:20,0:20:21.50:196,21,0	1/1:12,0:12:15.02:140,15,0	1/1:20,0:20:18.01:168,18,0	1/1:14,0:13:14.97:131,15,0	1/1:9,3:13:7.58:98,8,0	0/1:12,2:13:15.80:85,0,16	1/1:22,1:21:6.02:94,6,0	0/1:21,6:27:55.37:125,0,55	1/1:9,2:11:3.01:47,3,0	./.	./.	./.	1/1:22,0:22:18.02:167,18,0	1/1:25,0:25:42:382,42,0	1/1:27,0:27:26.62:233,27,0	1/1:12,0:12:12.01:112,12,0
chr10	23391117	.	CTATCTATCT	C	7307.75	PASS	AB=0.988;AC=36;AF=0.643;AN=56;BaseQRankSum=5.712;DP=378;FS=2.887;HRun=0;HaplotypeScore=171.4708;InbreedingCoeff=0.6200;MQ=42.41;MQ0=16;MQRankSum=-6.932;QD=27.79;ReadPosRankSum=6.746;VQSLOD=3.8398;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,6:17:36.07:667,36,0	1/1:0,7:7:18.06:383,18,0	0/0:9,0:2:6.02:0,6,85	0/0:7,0:5:15.04:0,15,206	1/1:0,12:16:29.81:418,30,0	1/1:0,15:15:21.07:532,21,0	1/1:0,8:8:6.02:139,6,0	0/0:23,0:16:42.34:0,42,225	1/1:0,3:5:15.05:321,15,0	1/1:2,3:10:26.99:586,27,0	1/1:0,14:14:18.06:363,18,0	1/1:0,18:18:30.10:809,30,0	1/1:0,18:18:30.10:829,30,0	1/1:0,10:11:33.11:739,33,0	0/1:17,0:17:8.41:8,0,65	0/1:13,0:12:7.57:8,0,35	0/0:12,0:12:9.88:0,10,243	0/0:12,0:11:5.75:0,6,377	0/0:16,0:12:33.47:0,33,463	0/0:21,0:21:38.48:0,38,785	0/0:15,0:15:21.07:0,21,378	1/1:0,6:6:6.02:84,6,0	1/1:2,4:9:18.06:251,18,0	1/1:2,1:9:9.03:126,9,0	1/1:0,18:18:36.12:837,36,0	0/1:19,1:19:35.25:158,0,35	0/1:21,0:21:15.11:15,0,131	1/1:9,0:9:9.73:34,10,0
chr10	23391121	.	CT	C	2070.27	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=3.036;DP=366;FS=12.158;HRun=1;HaplotypeScore=151.5868;InbreedingCoeff=0.3521;MQ=38.99;MQ0=21;MQRankSum=-4.157;QD=9.00;ReadPosRankSum=6.431;VQSLOD=-0.0592;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:16:3.98:0,4,62	0/1:7,0:7:0.90:1,0,18	0/0:9,0:1:3.01:0,3,31	0/0:8,0:4:9.03:0,9,137	0/0:17,0:17:23.02:0,23,80	0/1:15,0:15:8.94:11,0,9	0/1:8,0:8:2.78:3,0,4	1/1:8,9:9:27.09:377,27,0	0/1:6,0:6:3.94:4,0,12	0/1:11,0:10:1.41:1,0,27	0/1:14,0:14:1.11:1,0,18	0/1:18,0:18:1.66:29,0,2	0/1:18,0:18:1.64:29,0,2	0/1:11,0:11:11.69:12,0,23	1/1:0,16:16:37.74:407,38,0	1/1:0,12:11:29.90:328,30,0	0/1:13,0:13:3.64:4,0,125	0/0:13,0:12:23.52:0,24,296	0/0:14,0:9:20.56:0,21,273	0/0:21,0:21:28.29:0,28,416	0/0:13,1:14:16.29:0,16,229	0/0:6,0:6:4.74:0,5,16	0/0:8,0:8:11.86:0,12,40	0/0:9,0:9:7.11:0,7,24	0/1:18,0:18:16.93:17,0,21	1/1:4,14:17:49.85:380,50,0	1/1:3,16:19:53.79:561,54,0	1/1:0,9:9:11.87:79,12,0
chr10	23391135	.	ATCT	A	887.06	PASS	AB=0.908;AC=21;AF=0.420;AN=50;BaseQRankSum=7.046;DP=392;FS=6.944;HRun=0;HaplotypeScore=193.9584;InbreedingCoeff=-0.3178;MQ=35.94;MQ0=42;MQRankSum=-5.019;QD=3.15;ReadPosRankSum=7.941;VQSLOD=0.9979;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:20,0:17:12.30:12,0,29	0/1:8,0:8:5.48:5,0,67	./.	./.	0/0:18,0:16:8.98:0,9,102	0/1:13,0:13:18.49:18,0,27	1/1:8,0:7:2.49:9,2,0	0/0:19,0:3:6.02:0,6,78	0/1:13,0:12:32.01:32,0,84	0/1:11,0:9:7.43:7,0,121	0/0:18,0:17:3:0,3,143	1/1:18,0:18:16.63:58,17,0	0/1:22,0:22:33.81:34,0,126	0/1:16,0:16:30.94:31,0,59	0/1:8,11:19:90.38:118,0,90	0/1:8,8:15:84.34:84,0,133	0/1:12,0:12:14.68:15,0,30	0/0:12,0:11:3.70:0,4,203	0/0:10,0:7:4.06:0,4,179	0/1:21,0:21:6.13:6,0,137	0/1:12,0:11:2.59:3,0,34	./.	0/0:9,0:9:7.62:0,8,66	0/0:6,0:6:3.01:0,3,39	0/1:21,0:19:19.42:45,0,19	0/1:11,13:20:46.12:276,0,46	0/1:12,11:23:99:173,0,154	1/1:1,4:5:12:105,12,0
chr10	23391145	.	CATCT	C	693.09	PASS	AB=0.900;AC=10;AF=0.192;AN=52;BaseQRankSum=-3.490;DP=471;FS=20.044;HRun=0;HaplotypeScore=231.9240;InbreedingCoeff=0.6600;MQ=33.20;MQ0=62;MQRankSum=1.153;QD=8.66;ReadPosRankSum=1.089;VQSLOD=1.4818;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:20:19.24:0,19,290	0/0:12,0:12:11.97:0,12,172	./.	./.	0/0:22,0:20:9.03:0,9,166	0/0:15,0:12:11.97:0,12,152	0/0:10,0:8:8.94:0,9,80	0/0:28,0:4:9.03:0,9,119	0/0:19,0:18:25.13:0,25,271	0/0:19,0:12:27.09:0,27,526	0/0:17,0:15:18.06:0,18,298	0/0:16,0:16:29.95:0,30,428	0/0:18,0:18:32.88:0,33,513	0/0:22,0:22:24.93:0,25,345	0/0:22,0:22:30.79:0,31,330	0/0:19,0:18:34.16:0,34,387	1/1:10,2:13:8.32:117,8,0	0/1:8,3:11:38.40:98,0,38	1/1:8,1:7:14.01:104,14,0	1/1:6,17:22:33.52:466,34,0	1/1:6,7:11:3.01:52,3,0	0/1:10,0:5:0:0,0,0	0/0:19,0:16:7.74:0,8,116	0/0:5,0:6:3.01:0,3,55	0/0:18,0:15:23.75:0,24,394	0/0:27,0:23:48.13:0,48,914	0/0:30,0:29:56.14:0,56,816	0/0:5,0:5:13.29:0,13,266
chr10	23391202	.	C	CT	72.25	PASS	AB=0.847;AC=3;AF=0.056;AN=54;BaseQRankSum=1.090;DP=262;FS=1.543;HRun=1;HaplotypeScore=102.6841;InbreedingCoeff=0.0015;MQ=36.99;MQ0=28;MQRankSum=-2.241;QD=2.33;ReadPosRankSum=0.922;VQSLOD=-0.5930;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:13,1:12:19.55:20,0,194	0/0:7,0:7:6.02:0,6,84	0/0:15,0:1:3.01:0,3,42	./.	0/0:12,0:8:10.84:0,11,131	0/0:6,0:4:6.49:0,6,85	0/0:7,0:4:8.06:0,8,87	0/0:10,0:3:6.02:0,6,84	0/0:16,0:15:30.78:0,31,350	0/0:12,0:8:24.08:0,24,332	0/0:7,0:6:12.04:0,12,168	0/0:6,0:6:11.52:0,12,132	0/0:8,0:8:12.98:0,13,170	0/0:12,0:12:20.25:0,20,257	0/0:11,0:11:9.48:0,9,169	0/0:11,0:11:29.58:0,30,381	0/1:9,1:10:31.56:70,0,32	0/1:4,3:6:79.50:79,0,92	0/0:5,0:4:12.04:0,12,167	0/0:16,0:14:23.95:0,24,194	0/0:6,1:6:3:0,3,42	0/0:4,0:3:0.88:0,1,2	0/0:13,0:10:7.73:0,8,88	0/0:4,0:4:3.01:0,3,42	0/0:4,0:3:3.01:0,3,42	0/0:11,0:9:27.09:0,27,376	0/0:19,0:18:35.88:0,36,460	0/0:1,0:1:1.25:0,1,3
chr10	23391221	.	C	CATCT	1969.30	PASS	AB=0.869;AC=40;AF=0.800;AN=50;BaseQRankSum=1.493;DP=231;FS=4.630;HRun=0;HaplotypeScore=95.2557;InbreedingCoeff=0.1183;MQ=41.69;MQ0=15;MQRankSum=0.059;QD=11.00;ReadPosRankSum=-1.142;VQSLOD=2.6706;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,0:9:9.36:69,9,0	1/1:2,8:10:6.02:152,6,0	0/0:19,0:3:9.03:0,9,151	0/0:7,0:1:2.92:0,3,17	1/1:9,0:8:6.46:51,6,0	1/1:4,0:3:1.82:5,2,0	1/1:2,0:2:5.95:64,6,0	./.	1/1:12,2:13:12.35:178,12,0	1/1:4,1:8:15.02:268,15,0	./.	1/1:9,1:10:7.78:105,8,0	1/1:6,1:7:3.01:74,3,0	1/1:10,1:11:8.50:107,8,0	0/0:8,0:8:0.47:0,0,1	1/1:9,0:9:7.21:48,7,0	0/1:4,1:5:34.60:81,0,35	0/1:3,0:3:41.57:61,0,42	0/1:10,0:6:32.58:33,0,182	0/1:13,0:15:19.07:19,0,40	1/1:3,0:4:3.01:71,3,0	1/1:2,1:5:6.01:124,6,0	1/1:9,1:10:3.01:76,3,0	1/1:4,0:5:2.99:24,3,0	1/1:2,0:2:3:26,3,0	1/1:4,2:5:11.95:192,12,0	1/1:15,1:16:19.37:274,19,0	./.
chr10	23391289	.	C	CT	7821.30	PASS	AB=0.609;AC=37;AF=0.661;AN=56;BaseQRankSum=0.707;DP=483;FS=4.255;HRun=9;HaplotypeScore=170.2655;InbreedingCoeff=0.5927;MQ=48.95;MQ0=3;MQRankSum=-2.234;QD=20.86;ReadPosRankSum=-3.481;VQSLOD=2.5057;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:5,25:29:48.02:491,48,0	0/1:6,3:9:38.87:55,0,39	0/0:18,0:12:29.95:0,30,252	0/0:9,0:4:4.44:0,4,49	1/1:4,14:18:11.26:328,11,0	0/1:6,17:23:3.98:414,0,4	1/1:1,14:15:42.03:437,42,0	1/1:12,23:32:43.11:694,43,0	1/1:1,8:9:24.06:265,24,0	1/1:7,25:32:72.19:796,72,0	1/1:5,15:20:37.71:376,38,0	1/1:1,11:12:36.01:367,36,0	1/1:4,9:13:33.01:335,33,0	1/1:0,16:15:35.96:349,36,0	1/1:2,13:15:30.04:318,30,0	0/1:3,9:12:28.07:161,0,28	0/0:14,0:14:23.98:0,24,208	0/0:10,0:9:26.99:0,27,234	0/0:9,0:10:21.46:0,21,183	0/0:28,0:28:55.59:0,56,492	0/0:16,0:18:43.06:0,43,351	1/1:5,16:20:45.04:471,45,0	1/1:2,18:19:20.87:336,21,0	0/1:3,9:12:7.58:135,0,8	1/1:2,18:20:22.08:472,22,0	1/1:1,16:17:48.09:513,48,0	0/1:6,17:23:50.01:409,0,50	1/1:0,3:3:9.02:100,9,0
chr10	23391411	.	TATCCATCCATCCATCC	T	2209.51	PASS	AB=1.000;AC=25;AF=0.521;AN=48;BaseQRankSum=-3.021;DP=425;FS=21.610;HRun=0;HaplotypeScore=181.9048;InbreedingCoeff=0.1663;MQ=42.89;MQ0=46;MQRankSum=1.949;QD=8.63;ReadPosRankSum=2.418;VQSLOD=1.3134;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:21:15.86:0,16,169	1/1:9,0:8:9.03:164,9,0	./.	./.	./.	0/1:18,0:18:30.87:131,0,31	0/1:15,0:10:1.64:12,0,2	0/0:24,0:19:17.39:0,17,98	1/1:12,0:9:2.59:75,3,0	1/1:5,4:8:11.92:247,12,0	./.	1/1:15,0:14:2.95:68,3,0	0/1:16,0:10:67.06:165,0,67	1/1:19,0:18:4.73:222,5,0	0/0:14,0:12:21:0,21,453	0/0:12,0:8:6.02:0,6,130	0/0:9,0:6:0:0,0,0	1/1:15,0:13:15:225,15,0	0/1:21,0:16:31.12:176,0,31	0/0:19,0:17:8.92:0,9,69	0/0:11,0:8:0.08:0,0,1	1/1:15,0:12:12.03:300,12,0	1/1:16,0:13:3.52:193,4,0	1/1:12,0:7:3.01:97,3,0	0/1:21,0:21:89.31:137,0,89	0/1:25,0:24:76.66:125,0,77	0/1:18,0:16:23.93:24,0,98	0/0:9,0:7:0.57:0,1,13
chr10	23391439	.	CATCCATCCATCCATCCATCTATCTATCTATCTATCT	C	2674.16	PASS	AB=0.951;AC=16;AF=0.308;AN=52;BaseQRankSum=-1.022;DP=413;FS=8.912;HRun=0;HaplotypeScore=299.8968;InbreedingCoeff=-0.4094;MQ=42.33;MQ0=42;MQRankSum=2.200;QD=10.32;ReadPosRankSum=3.146;VQSLOD=0.3793;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:11:16.94:0,17,377	0/1:8,0:7:99:110,0,599	./.	./.	0/0:24,0:22:15.05:0,15,1118	0/1:18,0:18:99:106,0,1933	0/1:18,0:10:6.84:7,0,394	0/0:19,0:18:43.13:0,43,271	0/1:15,0:12:50.40:50,0,1667	0/1:12,0:11:96.79:97,0,1631	0/0:24,0:24:18.06:0,18,1111	0/1:8,0:7:15.17:15,0,819	0/1:16,0:11:81.49:81,0,1396	0/1:17,0:16:99:208,0,679	0/0:16,0:14:33.04:0,33,753	0/0:15,0:15:33.58:0,34,1191	0/0:5,0:2:0:0,0,0	0/1:14,0:12:99:637,0,294	0/1:8,11:16:13.05:802,0,13	0/1:5,14:18:20.05:20,0,54	0/0:6,0:3:0.47:0,0,1	0/1:15,0:12:99:277,0,871	0/1:16,0:13:99:178,0,966	0/1:12,0:7:90.87:91,0,219	0/1:20,0:20:99:119,0,1463	0/1:32,0:30:21.94:22,0,2693	0/0:21,0:19:28.90:0,29,1029	0/0:10,0:8:14.84:0,15,288
chr10	23391447	.	CATCCATCCATCT	C	3003.48	PASS	AB=1.000;AC=27;AF=0.519;AN=52;BaseQRankSum=-4.604;DP=433;FS=34.236;HRun=0;HaplotypeScore=179.8764;InbreedingCoeff=-0.1421;MQ=42.24;MQ0=43;MQRankSum=0.617;QD=8.91;ReadPosRankSum=3.563;VQSLOD=1.0437;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:15,0:12:27.53:28,0,99	0/1:9,0:8:23.68:24,0,56	./.	./.	0/0:28,0:26:20.96:0,21,172	0/1:16,0:16:99:116,0,170	0/0:16,0:9:7.34:0,7,53	1/1:23,0:20:22.03:143,22,0	0/1:15,0:12:0.19:0,0,195	0/1:14,0:13:93.17:93,0,182	0/0:28,0:28:23.86:0,24,186	0/1:8,0:7:26.43:26,0,44	0/1:16,0:11:59.60:139,0,60	0/1:16,0:15:32.96:88,0,33	0/1:16,0:14:93.80:94,0,151	0/1:17,0:17:17.19:236,0,17	0/0:5,0:2:0.47:0,0,1	0/1:15,0:14:33.99:245,0,34	1/1:19,0:16:26.84:265,27,0	1/1:19,0:18:9:100,9,0	0/1:7,0:4:0.41:0,0,0	0/1:14,0:11:99:106,0,110	0/1:21,0:18:65.59:66,0,203	0/1:13,0:8:36.46:40,0,36	0/0:19,0:19:5.35:0,5,250	1/1:3,29:30:68.01:726,68,0	1/1:21,0:19:35.91:513,36,0	1/1:11,0:8:8.90:115,9,0
chr10	23393031	.	GA	G	11035.54	PASS	AB=0.938;AC=43;AF=0.768;AN=56;BaseQRankSum=-13.280;DP=645;FS=1.733;HRun=10;HaplotypeScore=77.7031;InbreedingCoeff=0.8626;MQ=76.80;MQ0=0;MQRankSum=0.700;QD=21.10;ReadPosRankSum=0.923;VQSLOD=5.7568;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,24:29:46.80:574,47,0	1/1:0,13:13:32.99:287,33,0	0/1:14,1:14:9.76:10,0,91	0/0:15,0:15:3.55:0,4,195	1/1:1,26:27:74.98:651,75,0	1/1:4,22:26:62.98:547,63,0	1/1:6,18:24:50.98:443,51,0	1/1:5,15:20:42.25:358,42,0	1/1:3,22:25:62.98:547,63,0	1/1:2,19:21:56.99:495,57,0	1/1:4,20:24:37.08:495,37,0	1/1:1,19:20:53.99:469,54,0	1/1:2,30:32:50.80:670,51,0	1/1:5,22:27:56.96:495,57,0	1/1:2,24:26:41.80:592,42,0	1/1:2,27:29:71.98:625,72,0	0/0:6,0:25:51.49:0,51,286	0/0:2,0:15:31.88:0,32,167	0/0:4,0:22:54.13:0,54,281	0/0:4,0:33:85.37:0,85,436	0/0:2,0:12:31.41:0,31,168	1/1:1,22:23:62.97:547,63,0	1/1:2,20:22:56.99:495,57,0	1/1:5,23:28:8.61:510,9,0	1/1:1,15:16:14.81:357,15,0	1/1:2,38:40:99:959,111,0	1/1:0,26:26:74.99:651,75,0	1/1:0,10:10:29.99:260,30,0
chr10	23393363	.	CT	C	8068.14	PASS	AB=0.923;AC=29;AF=0.518;AN=56;BaseQRankSum=14.115;DP=480;FS=13.006;HRun=5;HaplotypeScore=50.1325;InbreedingCoeff=0.9347;MQ=77.20;MQ0=1;MQRankSum=-3.148;QD=31.15;ReadPosRankSum=2.085;VQSLOD=4.3914;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:87.26:0,87,1258	1/1:0,11:11:33.11:428,33,0	0/0:15,0:14:34.61:0,35,453	0/0:10,0:10:11.36:0,11,144	1/1:0,20:20:54.17:687,54,0	1/1:0,16:16:42.14:545,42,0	1/1:1,14:15:30.10:390,30,0	0/0:28,0:28:81.27:0,81,1194	1/1:0,15:15:36.12:466,36,0	1/1:0,22:22:66.21:851,66,0	1/1:0,23:23:66.21:851,66,0	1/1:1,22:23:63.20:818,63,0	1/1:0,15:15:39.13:506,39,0	1/1:0,24:24:66.21:857,66,0	0/0:12,0:12:36.12:0,36,538	0/0:16,0:16:48.16:0,48,716	0/0:30,0:30:90.30:0,90,1342	0/0:14,0:14:25.88:0,26,554	0/0:11,0:11:33.11:0,33,494	0/0:25,0:25:75.24:0,75,1099	0/0:8,0:8:24.08:0,24,360	1/1:0,12:12:33.10:415,33,0	1/1:0,14:14:33.58:430,34,0	1/1:0,8:8:15.05:195,15,0	1/1:0,17:17:48.16:623,48,0	0/1:22,2:24:5.35:5,0,917	0/0:18,0:18:54.18:0,54,807	0/0:5,0:5:15.05:0,15,222
chr10	23394131	.	A	ATG	18337.81	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=7.999;DP=596;FS=2.187;HRun=0;HaplotypeScore=92.7032;InbreedingCoeff=0.9179;MQ=90.81;MQ0=1;MQRankSum=-5.638;QD=41.30;ReadPosRankSum=4.087;VQSLOD=6.9521;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,15:16:42.14:714,42,0	1/1:2,1:3:3.01:51,3,0	0/0:26,0:26:60.18:0,60,750	0/0:24,0:24:57.03:0,57,657	1/1:4,27:31:66.23:1121,66,0	1/1:1,19:20:54.18:918,54,0	1/1:4,13:17:36.12:612,36,0	1/1:13,23:37:75.21:1182,75,0	1/1:2,13:15:33.07:530,33,0	1/1:3,31:34:93.30:1554,93,0	1/1:5,18:23:60.21:1013,60,0	1/1:1,12:13:33.11:558,33,0	1/1:3,15:18:42.14:714,42,0	1/1:2,14:16:39.13:663,39,0	1/1:2,28:30:78.74:1327,79,0	1/1:1,21:21:54.18:904,54,0	0/0:17,0:17:48.13:0,48,608	0/0:23,0:23:60.15:0,60,761	0/0:24,1:25:0.13:0,0,573	0/0:20,0:20:57.17:0,57,727	0/0:17,0:17:48.16:0,48,624	1/1:0,21:21:63.22:1071,63,0	1/1:1,17:18:42.14:714,42,0	1/1:1,17:18:45.15:750,45,0	1/1:2,18:20:15.18:828,15,0	1/1:7,25:32:75.26:1276,75,0	1/1:3,22:25:63.22:1071,63,0	1/1:0,15:15:45.15:765,45,0
chr10	23394976	.	T	TAA	10786.79	PASS	AB=0.588;AC=50;AF=0.893;AN=56;BaseQRankSum=-1.613;DP=496;FS=4.850;HRun=10;HaplotypeScore=66.5326;InbreedingCoeff=0.4421;MQ=54.43;MQ0=13;MQRankSum=0.264;QD=22.57;ReadPosRankSum=1.364;VQSLOD=4.2981;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,20:27:47.13:639,47,0	1/1:0,5:6:18.05:252,18,0	0/0:10,0:6:4.26:0,4,85	0/0:6,0:2:3:0,3,29	1/1:6,17:26:47.30:610,47,0	1/1:3,12:15:36.12:536,36,0	1/1:2,16:16:35.55:467,36,0	1/1:9,23:31:70.23:895,70,0	1/1:5,16:21:38.62:541,39,0	1/1:7,17:23:41.79:623,42,0	1/1:2,13:16:32.60:456,33,0	1/1:3,9:12:23.67:324,24,0	1/1:1,13:14:36.12:530,36,0	1/1:2,18:22:44.64:635,45,0	1/1:2,18:21:47.65:679,48,0	1/1:1,9:10:24.08:358,24,0	1/1:3,0:30:62.84:229,63,0	0/1:8,0:24:36.24:79,0,36	0/1:5,0:18:24.42:126,0,24	1/1:3,0:23:50.86:198,51,0	1/1:1,0:13:29.67:104,30,0	1/1:3,6:9:21.03:288,21,0	1/1:3,9:13:24.45:323,24,0	1/1:1,4:6:12.04:179,12,0	1/1:1,13:14:31.91:452,32,0	1/1:3,17:23:47.64:663,48,0	1/1:4,14:19:37.59:467,38,0	1/1:2,6:8:9.03:134,9,0
chr10	23395398	.	GA	G	6626.59	PASS	AB=0.600;AC=23;AF=0.411;AN=56;BaseQRankSum=15.720;DP=651;FS=0.304;HRun=8;HaplotypeScore=60.6434;InbreedingCoeff=0.9141;MQ=68.03;MQ0=1;MQRankSum=-0.697;QD=24.10;ReadPosRankSum=0.827;VQSLOD=5.4828;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,21:22:57.09:550,57,0	0/0:13,0:13:36.11:0,36,435	0/0:9,0:8:12.03:0,12,139	0/0:8,0:8:15.03:0,15,161	0/0:33,0:33:87.26:0,87,1040	0/0:26,0:26:72.20:0,72,847	0/0:13,0:13:39.12:0,39,471	1/1:4,29:33:87.11:832,87,0	0/0:27,0:27:78.24:0,78,942	0/0:37,0:37:99:0,105,1259	0/0:30,0:30:84.22:0,84,998	0/0:24,0:24:66.16:0,66,780	0/0:30,0:30:75.22:0,75,894	0/0:27,0:27:78.24:0,78,942	1/1:1,22:23:63.10:608,63,0	1/1:1,30:31:87.14:840,87,0	1/1:3,32:35:93.14:898,93,0	1/1:1,13:14:36.06:348,36,0	1/1:6,17:23:51.07:493,51,0	1/1:3,18:21:51.07:493,51,0	1/1:1,4:5:12.02:116,12,0	0/0:31,0:31:90.27:0,90,1077	0/0:22,0:22:57.17:0,57,688	0/0:18,0:19:54.02:0,54,620	0/0:26,0:27:75.10:0,75,885	0/1:7,14:21:93.76:319,0,94	1/1:4,35:39:99:956,99,0	1/1:2,6:8:18.02:174,18,0
chr10	23396239	.	A	AT	8414.02	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-15.449;DP=580;FS=4.956;HRun=7;HaplotypeScore=68.8494;InbreedingCoeff=0.9960;MQ=74.91;MQ0=0;MQRankSum=2.173;QD=30.49;ReadPosRankSum=2.120;VQSLOD=5.2541;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:48.07:0,48,462	1/1:3,9:12:24.07:290,24,0	0/0:15,0:15:33.01:0,33,318	0/0:12,0:12:24.02:0,24,226	1/1:0,22:22:66.20:794,66,0	1/1:3,25:28:75.23:905,75,0	1/1:1,16:17:39.12:471,39,0	0/0:25,0:25:63.07:0,63,595	1/1:3,14:17:39.12:471,39,0	1/1:0,29:29:87.27:1048,87,0	1/1:2,20:22:66.07:739,66,0	1/1:4,21:25:60.18:725,60,0	1/1:6,18:25:48.15:579,48,0	1/1:0,14:14:39.12:471,39,0	0/0:18,0:18:48.07:0,48,464	0/0:23,0:23:63.10:0,63,608	0/0:17,0:17:45.07:0,45,434	0/0:28,0:28:54.07:0,54,521	0/0:16,0:16:40.61:0,41,380	0/0:26,0:26:72.11:0,72,695	0/0:10,0:10:18.02:0,18,174	1/1:2,10:12:30.09:362,30,0	1/1:1,24:25:60.18:725,60,0	1/1:1,5:6:15.05:181,15,0	1/1:4,18:21:54.17:652,54,0	0/0:28,0:28:63.09:0,63,608	0/0:35,0:35:99:0,99,956	0/0:34,0:34:99:0,99,931
chr10	23396460	.	AT	A	14855.56	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=8.521;DP=540;FS=2.906;HRun=2;HaplotypeScore=56.7677;InbreedingCoeff=0.9967;MQ=76.57;MQ0=0;MQRankSum=-1.713;QD=34.31;ReadPosRankSum=3.282;VQSLOD=5.1770;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,13:14:39.13:505,39,0	1/1:0,7:7:18.06:233,18,0	0/0:15,0:15:45.06:0,45,555	0/0:6,0:6:18.01:0,18,208	1/1:0,32:32:90.14:1091,90,0	1/1:3,22:25:60.19:778,60,0	1/1:0,12:12:27.09:350,27,0	1/1:0,27:27:81.21:1004,81,0	1/1:0,25:25:63.20:809,63,0	1/1:0,28:28:84.25:1059,84,0	1/1:0,24:24:72.11:892,72,0	1/1:0,16:16:45.15:584,45,0	1/1:0,23:23:57.18:736,57,0	1/1:0,15:15:45.15:584,45,0	1/1:0,21:21:57.19:739,57,0	1/1:0,20:20:57.19:739,57,0	0/0:15,0:15:45.15:0,45,669	0/0:10,0:10:30.03:0,30,392	0/0:15,0:15:42.10:0,42,557	0/0:26,0:26:78.22:0,78,1108	0/0:20,0:20:60.19:0,60,877	1/1:1,12:13:36.07:448,36,0	1/1:0,28:28:63.20:817,63,0	1/1:1,16:17:42.14:545,42,0	1/1:1,17:18:51.17:662,51,0	1/1:0,19:19:57.17:726,57,0	1/1:0,33:33:81.26:1050,81,0	1/1:0,16:16:39.13:506,39,0
chr10	23397263	.	TA	T	7065.92	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=12.344;DP=579;FS=1.146;HRun=10;HaplotypeScore=60.6222;InbreedingCoeff=0.9865;MQ=71.60;MQ0=2;MQRankSum=0.458;QD=19.85;ReadPosRankSum=4.876;VQSLOD=5.5068;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,14:15:35.99:313,36,0	1/1:1,8:9:20.99:182,21,0	0/0:19,0:15:11.30:0,11,220	0/0:15,0:13:15.03:0,15,159	1/1:3,22:25:59.96:521,60,0	1/1:2,21:23:47.99:417,48,0	1/1:1,12:13:29.99:260,30,0	0/0:25,0:26:53.99:0,54,557	1/1:4,16:20:41.99:365,42,0	1/1:4,20:25:43.71:457,44,0	1/1:2,25:27:68.98:599,69,0	1/1:4,23:27:62.99:547,63,0	1/1:3,15:18:38.99:339,39,0	1/1:5,10:15:26.98:234,27,0	1/1:3,26:29:62.85:547,63,0	1/1:4,25:29:68.98:599,69,0	0/0:21,0:21:42.89:0,43,494	0/0:4,0:4:12.03:0,12,131	0/0:26,0:26:61.98:0,62,669	0/0:30,0:30:75.19:0,75,822	0/0:8,0:8:21.06:0,21,232	1/1:3,18:21:50.93:436,51,0	1/1:4,18:22:47.99:417,48,0	1/1:2,15:17:32.99:287,33,0	1/1:0,21:21:62.99:547,63,0	0/0:20,1:21:28.08:0,28,530	0/0:38,0:38:87.20:0,87,943	0/0:15,0:15:45.12:0,45,498
chr10	23398222	.	C	CAA	6144.48	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-6.773;DP=560;FS=6.512;HRun=8;HaplotypeScore=78.2813;InbreedingCoeff=0.9696;MQ=76.86;MQ0=1;MQRankSum=-0.854;QD=28.45;ReadPosRankSum=0.518;VQSLOD=4.6972;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:49.93:0,50,585	0/0:11,0:12:32.82:0,33,346	0/0:33,0:30:14.14:0,14,393	0/0:24,0:19:27.54:0,28,305	0/0:24,0:24:69.18:0,69,767	0/0:26,0:26:66.11:0,66,704	0/0:15,0:15:2.78:0,3,374	1/1:3,18:23:56.63:780,57,0	0/0:14,0:14:39.10:0,39,434	0/0:22,0:22:66.18:0,66,735	0/0:26,0:26:66.17:0,66,735	0/0:14,0:14:36.08:0,36,392	0/0:19,0:19:48.10:0,48,527	0/0:16,0:16:45.12:0,45,502	1/1:3,0:17:29.94:103,30,0	1/1:2,1:20:40.44:176,40,0	1/1:0,16:16:30.10:476,30,0	1/1:3,15:18:27.09:410,27,0	1/1:4,14:19:45.15:665,45,0	1/1:5,26:31:72.24:1118,72,0	1/1:2,10:12:18.06:286,18,0	0/0:17,0:17:42.10:0,42,467	0/0:16,0:16:42.05:0,42,441	0/0:15,0:15:45.07:0,45,478	0/0:27,0:27:75.18:0,75,827	1/1:6,19:25:26.75:854,27,0	1/1:3,23:26:56.78:867,57,0	1/1:0,8:9:27.09:410,27,0
chr10	23400660	.	T	TA	12516.27	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-4.459;DP=638;FS=0.821;HRun=8;HaplotypeScore=84.6222;InbreedingCoeff=0.9825;MQ=79.16;MQ0=1;MQRankSum=-7.775;QD=20.55;ReadPosRankSum=4.435;VQSLOD=4.7201;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:23:50.56:361,51,0	1/1:12,0:12:32.58:214,33,0	0/0:12,0:12:23.94:0,24,207	0/0:17,0:17:38.98:0,39,347	1/1:30,0:30:74.08:490,74,0	1/1:36,0:36:91.85:610,92,0	1/1:18,0:18:44.40:296,44,0	1/1:8,31:39:93.28:1073,93,0	1/1:28,0:28:71.05:464,71,0	1/1:33,0:33:84.29:487,84,0	1/1:20,0:20:53.29:348,53,0	1/1:20,0:20:44.42:290,44,0	1/1:24,0:24:68.17:455,68,0	1/1:24,0:24:65.20:438,65,0	1/1:0,0:20:51.13:260,51,0	1/1:0,2:23:51.34:280,51,0	1/1:1,14:15:39.12:450,39,0	1/1:2,5:7:15.04:173,15,0	1/1:1,24:25:72.21:830,72,0	1/1:1,26:28:75.18:851,75,0	1/1:3,15:18:48.14:550,48,0	1/1:20,0:20:50.29:325,50,0	1/1:29,0:29:74.05:486,74,0	1/1:17,0:17:35.56:235,36,0	1/1:25,0:25:67.98:435,68,0	1/1:6,24:30:80.96:881,81,0	1/1:4,35:38:93.26:1062,93,0	1/1:0,5:5:15.04:173,15,0
chr10	23400668	.	A	AC	14850.46	PASS	AB=1.000;AC=44;AF=0.786;AN=56;BaseQRankSum=-9.959;DP=641;FS=0.437;HRun=0;HaplotypeScore=77.0217;InbreedingCoeff=0.5914;MQ=78.18;MQ0=1;MQRankSum=-3.012;QD=26.19;ReadPosRankSum=5.162;VQSLOD=5.6073;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,20:21:54.11:761,54,0	1/1:0,13:13:36.01:498,36,0	0/0:10,0:10:27.05:0,27,325	0/0:16,0:16:41.22:0,41,537	1/1:0,30:30:84.04:1148,84,0	1/1:2,37:39:93.31:1359,93,0	1/1:0,17:17:45.15:657,45,0	0/1:36,0:36:22.48:152,0,22	1/1:0,26:26:72.24:1052,72,0	1/1:0,30:30:90.29:1294,90,0	1/1:0,18:18:54.18:790,54,0	1/1:0,20:20:45.15:658,45,0	1/1:0,26:26:69.23:1008,69,0	1/1:0,25:26:66.22:952,66,0	0/0:23,0:23:52.85:0,53,250	0/0:25,0:24:49.33:0,49,292	1/1:15,0:15:12.11:99,12,0	0/1:7,0:7:7.88:34,0,8	1/1:24,0:24:56.94:193,57,0	1/1:29,0:29:23.10:173,23,0	1/1:18,0:19:19.43:139,19,0	1/1:0,18:18:51.17:746,51,0	1/1:0,29:29:75.25:1097,75,0	1/1:1,18:19:36.12:526,36,0	1/1:1,28:29:69.20:1009,69,0	1/1:25,3:28:40.77:290,41,0	0/1:42,0:41:49.83:188,0,50	0/1:6,0:6:8.59:27,0,9
chr10	23401400	.	TA	T	12702.49	PASS	AB=0.929;AC=53;AF=0.946;AN=56;BaseQRankSum=-3.113;DP=578;FS=17.977;HRun=9;HaplotypeScore=57.7882;InbreedingCoeff=0.6380;MQ=75.13;MQ0=0;MQRankSum=-4.534;QD=22.32;ReadPosRankSum=2.690;VQSLOD=3.7633;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,20:23:40.32:526,40,0	1/1:0,8:8:20.88:180,21,0	0/1:12,1:13:19.18:19,0,90	0/0:9,0:8:17.26:0,17,177	1/1:2,22:24:62.95:566,63,0	1/1:2,24:26:66.03:604,66,0	1/1:2,16:18:42.02:384,42,0	1/1:3,26:29:78.02:709,78,0	1/1:4,14:18:36.02:329,36,0	1/1:0,21:21:63:565,63,0	1/1:0,20:20:56.87:499,57,0	1/1:3,21:24:51.02:467,51,0	1/1:0,26:26:65.91:604,66,0	1/1:3,20:23:57.03:522,57,0	1/1:1,19:20:54.03:494,54,0	1/1:0,20:20:51.03:467,51,0	1/1:1,14:15:42.02:384,42,0	1/1:2,9:11:27.01:247,27,0	1/1:6,9:15:26.99:247,27,0	1/1:4,26:30:71.87:639,72,0	1/1:2,18:20:51.03:467,51,0	1/1:2,18:20:51.02:467,51,0	1/1:4,29:33:84.04:769,84,0	1/1:1,14:15:39.02:357,39,0	1/1:4,26:30:69.03:631,69,0	1/1:3,24:27:72.01:653,72,0	1/1:2,31:33:81.04:742,81,0	1/1:1,6:7:18.01:165,18,0
chr10	23402407	.	TG	T	7449.09	PASS	AB=0.579;AC=51;AF=0.911;AN=56;BaseQRankSum=-2.716;DP=437;FS=0.000;HRun=10;HaplotypeScore=55.5369;InbreedingCoeff=0.6433;MQ=62.05;MQ0=1;MQRankSum=-1.084;QD=17.82;ReadPosRankSum=3.191;VQSLOD=5.2178;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,22:24:62.98:547,63,0	1/1:1,5:6:15:130,15,0	0/0:10,0:9:8.99:0,9,83	0/0:8,0:8:4.37:0,4,14	1/1:3,12:15:32.99:287,33,0	1/1:3,8:11:23.99:208,24,0	1/1:6,13:19:29.99:260,30,0	1/1:8,13:21:29.94:254,30,0	1/1:2,10:12:32.99:286,33,0	1/1:4,9:13:23.99:208,24,0	1/1:2,15:17:41.99:365,42,0	1/1:3,18:21:44.96:391,45,0	1/1:2,7:9:20.95:175,21,0	1/1:8,13:21:38.98:339,39,0	1/1:3,19:22:53.98:469,54,0	1/1:1,19:20:56.99:495,57,0	1/1:8,15:22:11.98:332,12,0	1/1:3,12:15:40.51:337,41,0	1/1:6,7:14:26:208,26,0	1/1:1,9:10:17.98:156,18,0	1/1:7,22:29:53.98:469,54,0	1/1:5,6:11:15:130,15,0	1/1:3,9:12:23.90:208,24,0	1/1:7,17:24:44.98:391,45,0	1/1:2,11:13:23.98:208,24,0	1/1:5,10:15:32.98:285,33,0	1/1:4,6:10:19.23:159,19,0	0/1:3,8:11:29.69:155,0,30
chr10	23402487	.	ATACATACATACATAC	A	763.53	PASS	AB=1.000;AC=6;AF=0.107;AN=56;BaseQRankSum=2.337;DP=397;FS=14.004;HRun=0;HaplotypeScore=193.4042;InbreedingCoeff=0.4899;MQ=48.56;MQ0=10;MQRankSum=-5.168;QD=12.73;ReadPosRankSum=-2.137;VQSLOD=1.4307;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:20,0:20:76.18:76,0,222	0/0:6,0:6:14.87:0,15,551	0/0:9,0:5:15.01:0,15,191	0/0:12,0:8:24.08:0,24,354	0/0:18,0:18:32.70:0,33,1307	0/0:12,0:12:20.86:0,21,937	0/1:25,0:25:23.21:23,0,1729	0/0:30,0:27:80.37:0,80,1894	0/0:12,0:12:12.04:0,12,591	0/0:17,0:16:47.52:0,48,2256	0/0:14,0:14:30.10:0,30,1341	0/0:10,0:10:15.04:0,15,697	0/0:8,0:8:0.95:0,1,364	0/0:13,0:12:6.02:0,6,287	1/1:3,5:8:14.20:547,14,0	1/1:5,2:7:11.28:246,11,0	0/0:21,0:20:18.44:0,18,1795	0/0:8,0:8:23.98:0,24,480	0/0:12,0:10:29.26:0,29,965	0/0:12,0:11:12.04:0,12,400	0/0:23,0:23:35.14:0,35,1373	0/0:8,0:8:17.76:0,18,715	0/0:13,0:13:23.95:0,24,1082	0/0:14,0:14:15.47:0,15,747	0/0:18,0:18:16.17:0,16,1418	0/0:18,0:18:40.08:0,40,3000	0/0:16,0:16:24.08:0,24,1667	0/0:13,0:13:24.08:0,24,1747
chr10	23402504	.	T	TACATACATAAAG	19127.38	PASS	AB=1.000;AC=50;AF=0.893;AN=56;BaseQRankSum=-3.113;DP=420;FS=2.445;HRun=0;HaplotypeScore=144.0294;InbreedingCoeff=0.5862;MQ=65.91;MQ0=6;MQRankSum=-4.429;QD=49.30;ReadPosRankSum=2.374;VQSLOD=4.3590;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:19:51.14:824,51,0	1/1:8,0:8:24.08:435,24,0	0/0:11,0:8:22.32:0,22,369	0/0:21,0:17:47.34:0,47,717	1/1:2,14:19:39.13:1144,39,0	1/1:12,0:13:36.12:974,36,0	1/1:23,0:23:60.20:1023,60,0	1/1:28,0:25:51.35:1023,51,0	1/1:1,9:12:12.04:704,12,0	1/1:17,0:16:48.16:1238,48,0	1/1:10,0:11:21.07:602,21,0	1/1:3,6:10:15.05:740,15,0	1/1:8,0:8:24.08:366,24,0	1/1:3,11:16:12.04:673,12,0	0/1:11,0:11:99:184,0,207	0/1:9,0:9:49.28:297,0,49	1/1:25,1:26:66.22:1699,66,0	1/1:6,0:6:18.06:267,18,0	1/1:0,0:14:42.14:859,42,0	1/1:5,1:17:36.12:1061,36,0	1/1:22,0:22:39.06:800,39,0	1/1:6,2:8:21.07:701,21,0	1/1:13,2:15:39.13:1348,39,0	1/1:9,1:10:11.53:428,12,0	1/1:12,2:14:36.11:1120,36,0	1/1:0,0:18:48.43:506,48,0	1/1:0,0:15:13.53:45,14,0	1/1:1,0:18:18.86:65,19,0
chr10	23402637	.	G	GCCCTC	5620.41	PASS	AB=0.952;AC=45;AF=0.833;AN=54;BaseQRankSum=-2.711;DP=258;FS=4.631;HRun=0;HaplotypeScore=71.5581;InbreedingCoeff=0.4260;MQ=72.06;MQ0=16;MQRankSum=-4.153;QD=33.26;ReadPosRankSum=3.211;VQSLOD=4.4641;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:9,0:10:11.92:157,12,0	1/1:3,0:3:5.95:105,6,0	0/0:38,0:13:33.02:0,33,515	0/0:42,0:18:26.83:0,27,442	1/1:6,0:6:3.01:86,3,0	1/1:7,4:12:26.12:590,26,0	1/1:6,2:8:8.41:195,8,0	1/1:19,0:17:38.80:437,39,0	1/1:2,0:2:5.97:104,6,0	1/1:7,0:7:6:170,6,0	1/1:4,1:5:4.60:167,5,0	1/1:1,1:2:6.02:174,6,0	1/1:3,0:5:15.05:409,15,0	1/1:2,1:3:3.01:87,3,0	1/1:7,0:7:20.80:321,21,0	1/1:6,0:6:18.06:381,18,0	1/1:12,0:12:4.47:188,4,0	0/1:5,0:5:2.81:71,0,3	1/1:12,0:8:16.09:198,16,0	./.	0/0:6,0:6:1.25:0,1,3	1/1:3,0:3:9.03:237,9,0	0/1:2,0:2:0:0,0,0	1/1:1,0:1:3.01:86,3,0	1/1:10,2:11:17.55:433,18,0	1/1:4,0:4:12.04:331,12,0	1/1:12,1:13:32.04:555,32,0	0/1:6,0:6:3.25:138,0,3
chr10	23402640	.	C	CT	1286.61	PASS	AB=0.838;AC=36;AF=0.643;AN=56;BaseQRankSum=0.072;DP=265;FS=3.471;HRun=0;HaplotypeScore=68.0816;InbreedingCoeff=0.1416;MQ=74.82;MQ0=16;MQRankSum=-2.652;QD=7.57;ReadPosRankSum=4.722;VQSLOD=3.3058;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:7,0:7:14.62:26,0,15	1/1:2,1:3:5.93:41,6,0	0/0:40,0:15:39.03:0,39,413	0/0:44,0:20:35.26:0,35,328	1/1:3,2:5:2.96:23,3,0	0/1:9,3:12:5.33:85,0,5	1/1:7,1:8:10.87:52,11,0	0/1:20,1:19:7.18:187,0,7	1/1:1,1:2:5.95:43,6,0	1/1:4,2:6:5.08:44,5,0	1/1:3,2:5:7.03:35,7,0	1/1:1,1:2:5.78:35,6,0	1/1:3,3:6:14.56:95,15,0	1/1:3,1:4:1.25:20,1,0	1/1:3,4:7:20.72:144,21,0	0/1:1,5:6:2.72:102,0,3	0/1:13,2:12:31.74:54,0,32	0/0:5,0:4:2.99:0,3,23	0/1:14,0:10:10.92:11,0,35	0/0:4,0:4:0:0,0,0	1/1:6,0:6:2.04:6,2,0	1/1:1,2:3:8.50:47,9,0	0/0:1,0:1:0.89:0,1,2	0/0:1,0:1:0:0,0,0	1/1:7,5:11:6.95:97,7,0	0/1:3,3:6:10.58:48,0,11	1/1:9,5:14:12.65:164,13,0	0/1:5,1:6:3.28:75,0,3
chr10	23402646	.	C	CCCCCAAA	8722.33	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-4.228;DP=262;FS=3.892;HRun=0;HaplotypeScore=78.6034;InbreedingCoeff=0.5020;MQ=81.98;MQ0=9;MQRankSum=-5.539;QD=49.28;ReadPosRankSum=0.181;VQSLOD=4.0900;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:6:9.01:164,9,0	1/1:2,1:3:6.02:150,6,0	0/0:40,0:16:45.08:0,45,624	0/0:44,0:22:4.99:0,5,624	1/1:3,2:5:3.01:104,3,0	1/1:8,2:12:32.68:685,33,0	1/1:6,1:9:24.08:454,24,0	1/1:8,0:12:36.09:498,36,0	1/1:1,0:2:6.02:161,6,0	1/1:3,2:5:12.04:299,12,0	1/1:2,2:5:12.04:274,12,0	1/1:1,1:2:6.02:175,6,0	1/1:6,2:10:30.09:725,30,0	1/1:2,1:5:12.04:283,12,0	1/1:3,0:7:12.04:420,12,0	1/1:2,0:8:24.01:595,24,0	1/1:12,0:14:25.49:452,25,0	1/1:3,0:5:10.28:147,10,0	1/1:8,0:10:26.03:391,26,0	1/1:6,0:6:9.03:133,9,0	1/1:3,0:4:6.02:84,6,0	1/1:1,2:4:9.03:304,9,0	1/1:1,0:2:6.02:118,6,0	1/1:0,0:1:3.01:56,3,0	1/1:6,5:12:30.10:760,30,0	1/1:5,0:8:22.88:442,23,0	1/1:3,0:10:27.09:727,27,0	1/1:4,0:5:5.99:120,6,0
chr10	23402652	.	G	GA	4659.58	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-1.957;DP=266;FS=22.796;HRun=6;HaplotypeScore=66.9110;InbreedingCoeff=0.5503;MQ=86.77;MQ0=7;MQRankSum=-5.132;QD=24.14;ReadPosRankSum=-0.594;VQSLOD=3.0219;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,5:5:9.03:109,9,0	1/1:1,3:4:6.02:73,6,0	0/0:32,0:14:23.70:0,24,209	0/0:41,0:24:22.33:0,22,215	1/1:2,4:6:5.98:63,6,0	1/1:7,4:11:13.80:129,14,0	1/1:2,5:7:17.99:205,18,0	1/1:3,16:18:48.15:589,48,0	1/1:1,2:3:6:59,6,0	1/1:2,3:5:9.03:109,9,0	1/1:2,3:5:15.04:180,15,0	1/1:3,1:4:9.89:88,10,0	1/1:3,7:10:27.78:283,28,0	1/1:2,3:5:9.50:108,9,0	1/1:1,4:5:15.05:180,15,0	1/1:3,5:8:21.47:235,21,0	1/1:5,10:13:30.93:356,31,0	1/1:2,5:6:9.03:107,9,0	1/1:2,10:12:31.81:370,32,0	1/1:1,7:8:15.05:183,15,0	1/1:2,2:4:3.01:37,3,0	1/1:2,2:4:6.02:74,6,0	1/1:1,1:2:4.83:42,5,0	1/1:0,1:1:3.01:35,3,0	1/1:3,13:15:32.09:318,32,0	1/1:1,11:12:33.08:394,33,0	1/1:2,9:11:22.42:258,22,0	1/1:3,1:4:6.02:74,6,0
chr10	23404550	.	G	GTT	6192.64	PASS	AB=0.587;AC=51;AF=0.911;AN=56;BaseQRankSum=1.545;DP=605;FS=1.882;HRun=9;HaplotypeScore=161.0116;InbreedingCoeff=0.7832;MQ=65.20;MQ0=0;MQRankSum=-3.549;QD=10.59;ReadPosRankSum=3.747;VQSLOD=1.4515;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,1:36:72.36:248,72,0	1/1:0,0:6:12.48:43,12,0	0/0:8,0:7:20.90:0,21,194	0/0:12,0:8:18.03:0,18,179	1/1:5,0:35:70.09:250,70,0	1/1:6,0:29:23.87:148,24,0	1/1:2,0:13:27.45:94,27,0	1/1:9,2:32:66.50:677,67,0	1/1:2,0:20:37.43:128,37,0	1/1:7,1:23:42.66:182,43,0	1/1:2,0:23:24.47:131,24,0	1/1:3,0:19:39.93:137,40,0	1/1:0,0:19:42.92:162,43,0	1/1:2,0:22:42.42:145,42,0	1/1:6,0:41:82.09:282,82,0	0/1:8,0:26:6.45:128,0,6	1/1:4,1:26:47.58:465,48,0	1/1:4,0:17:24.04:230,24,0	1/1:3,0:16:40.29:381,40,0	1/1:7,0:24:48.01:449,48,0	1/1:4,0:12:24.04:230,24,0	1/1:3,1:21:37.31:128,37,0	1/1:3,0:19:37.43:129,37,0	1/1:0,1:17:35.17:156,35,0	1/1:3,1:18:32.95:149,33,0	1/1:4,1:25:51.38:458,51,0	1/1:7,0:29:47.82:510,48,0	1/1:2,4:16:11.74:153,12,0
chr10	23405432	.	T	TTAA	2986.75	PASS	AB=0.622;AC=34;AF=0.607;AN=56;BaseQRankSum=-2.786;DP=413;FS=5.334;HRun=0;HaplotypeScore=97.1194;InbreedingCoeff=0.1132;MQ=71.89;MQ0=6;MQRankSum=-0.884;QD=8.63;ReadPosRankSum=4.213;VQSLOD=2.4535;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:4,0:20:30.64:31,0,63	1/1:0,0:5:5.92:16,6,0	0/0:13,0:10:26.98:0,27,353	0/0:23,0:18:16.62:0,17,244	0/1:4,0:25:10.97:146,0,11	0/1:3,0:14:16.71:17,0,63	0/1:1,0:4:6.92:7,0,18	0/1:11,0:26:99:255,0,101	0/1:1,0:9:6.17:24,0,6	0/1:4,0:19:28.31:114,0,28	1/1:4,0:17:4.50:84,5,0	0/0:3,0:10:20.48:0,20,128	1/1:2,0:12:20.21:57,20,0	0/0:1,0:9:20.18:0,20,114	0/0:11,0:11:12.39:0,12,224	0/1:12,0:12:33.18:33,0,212	1/1:4,0:21:25.18:445,25,0	0/1:3,1:13:4.19:125,0,4	0/1:8,0:19:76.47:321,0,76	0/1:7,0:22:33.50:365,0,34	1/1:4,0:4:8.99:95,9,0	1/1:1,0:1:0.89:2,1,0	1/1:0,0:13:20.39:59,20,0	0/1:3,0:5:2:2,0,33	1/1:4,0:25:7.83:113,8,0	1/1:4,0:18:10.99:318,11,0	1/1:4,0:22:35.35:347,35,0	1/1:1,0:9:18.04:189,18,0
chr10	23405443	.	AG	A	1523.41	PASS	AB=0.927;AC=12;AF=0.214;AN=56;BaseQRankSum=-4.071;DP=431;FS=1.105;HRun=1;HaplotypeScore=75.8198;InbreedingCoeff=0.1509;MQ=71.95;MQ0=7;MQRankSum=3.069;QD=9.07;ReadPosRankSum=-4.859;VQSLOD=-0.7009;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:43.69:0,44,255	0/0:7,0:5:12.41:0,12,64	0/0:15,0:11:9.42:0,9,153	0/0:23,1:17:31.98:0,32,301	0/0:24,0:24:28.61:0,29,315	0/0:13,0:13:31.80:0,32,197	0/0:4,0:4:11.54:0,12,68	0/1:31,0:31:99:410,0,397	0/0:9,0:8:14.56:0,15,98	0/0:22,0:22:22.78:0,23,325	0/0:18,0:16:9.03:0,9,208	0/0:11,0:10:20.54:0,21,127	0/0:14,0:13:32.65:0,33,171	0/0:13,0:13:28.05:0,28,199	1/1:0,14:14:27.09:374,27,0	1/1:2,9:11:33.10:441,33,0	0/0:20,1:20:8.95:0,9,190	0/0:13,0:12:17.35:0,17,116	0/1:18,0:17:99:134,0,178	0/1:22,1:23:99:124,0,228	0/1:1,3:4:7.67:39,0,8	0/1:2,0:2:14.88:20,0,15	0/0:16,0:16:40.57:0,41,241	0/0:6,0:6:10.70:0,11,77	0/1:23,2:25:10.85:11,0,173	0/1:17,0:15:99:113,0,186	0/1:21,1:23:20.20:20,0,145	0/0:11,0:11:28.46:0,28,169
chr10	23407391	.	CA	C	8478.77	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-16.757;DP=632;FS=0.656;HRun=8;HaplotypeScore=101.8985;InbreedingCoeff=0.9853;MQ=82.56;MQ0=0;MQRankSum=-2.775;QD=24.02;ReadPosRankSum=4.019;VQSLOD=4.8270;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,25:28:60.09:579,60,0	1/1:2,12:14:30.05:290,30,0	0/0:20,0:21:32.94:0,33,397	0/0:20,0:19:6.43:0,6,310	1/1:0,38:38:99:1072,111,0	1/1:1,24:25:66.11:637,66,0	1/1:0,17:17:42.07:406,42,0	0/0:4,0:27:62.61:0,63,318	1/1:2,21:23:60.09:579,60,0	1/1:2,25:27:72.10:695,72,0	1/1:1,21:22:60.10:579,60,0	1/1:4,16:20:48.04:456,48,0	1/1:5,26:31:72.11:695,72,0	1/1:3,16:19:48.07:463,48,0	0/0:2,0:26:63.25:0,63,322	0/0:0,0:13:31.63:0,32,161	0/0:2,0:16:43.22:0,43,230	0/0:2,0:13:25.88:0,26,132	0/0:7,0:25:57.55:0,58,296	0/0:6,0:31:75.83:0,76,418	0/0:0,0:10:22.97:0,23,117	1/1:2,25:27:69.11:666,69,0	1/1:1,18:19:42.07:405,42,0	1/1:3,21:24:54.09:521,54,0	1/1:2,17:19:45.07:435,45,0	0/0:1,0:37:98.95:0,99,505	0/0:2,0:30:77.65:0,78,405	0/0:2,0:10:20.33:0,20,122
chr10	23409744	.	T	TC	18460.80	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=3.025;DP=790;FS=4.058;HRun=2;HaplotypeScore=111.8428;InbreedingCoeff=0.9976;MQ=62.10;MQ0=3;MQRankSum=7.225;QD=25.71;ReadPosRankSum=6.535;VQSLOD=4.5553;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:40,0:40:99:832,105,0	1/1:10,0:10:29.87:228,30,0	0/0:38,0:30:84.22:0,84,1019	0/0:34,0:28:78.24:0,78,952	1/1:46,0:46:99:1027,129,0	1/1:24,0:24:59.79:466,60,0	1/1:19,0:19:53.77:412,54,0	1/1:27,0:19:50.94:443,51,0	1/1:25,0:25:68.76:538,69,0	1/1:33,0:33:94.64:621,95,0	1/1:26,0:26:71.73:553,72,0	1/1:27,0:27:72.92:545,73,0	1/1:28,0:28:77.67:592,78,0	1/1:22,0:22:56.74:429,57,0	1/1:0,29:29:75.25:1080,75,0	1/1:1,27:28:84.26:1189,84,0	1/1:1,31:32:90.30:1272,90,0	1/1:1,29:30:75.25:1079,75,0	1/1:1,22:21:60.20:862,60,0	1/1:0,31:31:90.26:1271,90,0	1/1:1,23:24:57.19:807,57,0	1/1:39,0:39:99:848,111,0	1/1:30,0:30:86.69:677,87,0	1/1:23,0:23:65.48:509,65,0	1/1:28,0:26:80.57:616,81,0	1/1:35,0:34:99:703,104,0	1/1:32,0:32:89.70:699,90,0	1/1:7,0:7:20.92:162,21,0
chr10	23409746	.	C	CT	26538.48	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-5.610;DP=785;FS=3.831;HRun=0;HaplotypeScore=82.5808;InbreedingCoeff=0.9977;MQ=62.40;MQ0=4;MQRankSum=7.259;QD=37.01;ReadPosRankSum=7.048;VQSLOD=4.4264;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,38:38:99:1677,105,0	1/1:1,11:12:30.10:479,30,0	0/0:37,0:31:84.23:0,84,1134	0/0:31,0:29:87:0,87,1127	1/1:0,46:46:99:2076,132,0	1/1:0,24:24:60.20:959,60,0	1/1:0,19:19:54.18:863,54,0	1/1:0,26:18:54.18:841,54,0	1/1:0,25:25:69.24:1102,69,0	1/1:0,33:33:99:1561,99,0	1/1:0,27:27:72.25:1151,72,0	1/1:2,26:28:70.87:1148,71,0	1/1:0,29:29:78.27:1247,78,0	1/1:0,23:23:57.19:911,57,0	1/1:29,0:29:73.88:519,74,0	1/1:27,1:28:82.93:604,83,0	1/1:33,0:33:71.60:586,72,0	1/1:28,0:28:73.86:523,74,0	1/1:23,0:22:58.96:410,59,0	1/1:31,0:31:68.90:589,69,0	1/1:22,0:22:56.16:388,56,0	1/1:1,36:37:99:1771,111,0	1/1:0,30:30:87.30:1390,87,0	1/1:1,22:23:57.31:998,57,0	1/1:0,27:26:81.27:1273,81,0	1/1:0,36:35:99:1701,108,0	1/1:0,32:32:90.31:1438,90,0	1/1:0,7:7:21.07:336,21,0
chr10	23410771	.	A	AT	11572.32	PASS	AB=0.591;AC=39;AF=0.696;AN=56;BaseQRankSum=0.768;DP=576;FS=5.307;HRun=8;HaplotypeScore=73.7731;InbreedingCoeff=0.9504;MQ=79.01;MQ0=0;MQRankSum=-1.124;QD=29.45;ReadPosRankSum=4.419;VQSLOD=4.6731;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,20:23:60.18:692,60,0	1/1:0,11:11:30.09:346,30,0	0/0:16,0:17:28.16:0,28,335	0/0:14,0:14:30:0,30,273	1/1:5,36:41:99:1199,108,0	1/1:1,24:25:66.20:762,66,0	0/1:4,9:13:0.12:250,0,0	0/0:43,0:43:99:0,108,985	1/1:0,16:16:48.14:554,48,0	1/1:3,25:28:50.78:838,51,0	1/1:4,15:19:23.64:510,24,0	1/1:1,13:14:39.12:450,39,0	1/1:1,19:20:57.17:654,57,0	1/1:1,17:18:48.14:554,48,0	0/0:23,0:23:66.02:0,66,599	0/0:23,0:23:60.03:0,60,549	1/1:0,20:20:60.14:678,60,0	1/1:1,17:18:48.14:553,48,0	1/1:10,15:25:48.11:537,48,0	1/1:1,27:28:81.20:920,81,0	1/1:1,4:5:11.99:124,12,0	1/1:4,10:14:30.09:344,30,0	1/1:1,15:17:44.97:499,45,0	1/1:2,12:14:33.10:381,33,0	1/1:2,22:24:63.19:727,63,0	0/0:27,0:27:75.04:0,75,686	0/0:27,0:26:75.04:0,75,686	0/0:9,0:9:25.26:0,25,223
chr10	23411273	.	TGACGCGGAGCGCA	T	6449.36	PASS	AB=0.537;AC=3;AF=0.054;AN=56;BaseQRankSum=11.636;DP=790;FS=1.030;HRun=0;HaplotypeScore=315.5802;InbreedingCoeff=0.6338;MQ=82.69;MQ0=0;MQRankSum=-12.396;QD=88.35;ReadPosRankSum=3.304;VQSLOD=3.7255;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,138,8925	0/0:19,0:19:57.20:0,57,3783	0/0:26,0:26:75.24:0,75,3612	0/0:20,0:20:50.35:0,50,2248	0/0:22,0:22:66.23:0,66,4014	0/0:21,0:20:63.19:0,63,3594	0/0:23,0:23:69.24:0,69,4346	0/0:38,0:38:99:0,114,6081	0/0:33,0:33:99:0,99,6072	0/0:25,0:25:75.26:0,75,4898	0/0:14,0:14:42.11:0,42,2209	0/0:35,0:35:99:0,105,6398	0/0:27,0:27:78.25:0,78,4900	0/0:45,0:45:99:0,135,8449	1/1:4,40:44:99:4037,108,0	0/1:4,25:29:99:2412,0,132	0/0:43,0:43:99:0,126,8354	0/0:28,0:28:84.26:0,84,4960	0/0:20,0:20:60.20:0,60,3426	0/0:16,0:16:45.14:0,45,2502	0/0:47,0:47:99:0,141,8436	0/0:31,0:31:93.32:0,93,5771	0/0:17,0:17:51.18:0,51,3275	0/0:37,0:37:99:0,111,7143	0/0:25,0:25:75.26:0,75,4683	0/0:26,0:26:78.27:0,78,4953	0/0:29,0:29:87.28:0,87,4888	0/0:4,0:4:12.04:0,12,516
chr10	23411537	.	AT	A	10847.12	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-4.358;DP=524;FS=14.593;HRun=9;HaplotypeScore=53.2306;InbreedingCoeff=0.9869;MQ=84.45;MQ0=0;MQRankSum=-7.279;QD=22.23;ReadPosRankSum=5.151;VQSLOD=4.0895;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,19:21:54.02:494,54,0	1/1:0,9:9:27.01:247,27,0	0/0:21,0:20:42.08:0,42,469	0/0:15,0:15:33.15:0,33,299	1/1:2,7:9:15:137,15,0	1/1:1,14:15:30.02:275,30,0	1/1:1,12:13:30.01:275,30,0	1/1:7,30:37:90:812,90,0	1/1:1,15:16:33.02:302,33,0	1/1:2,15:17:44.99:401,45,0	1/1:0,15:15:45.02:412,45,0	1/1:1,13:14:33.02:302,33,0	1/1:1,16:17:48.03:439,48,0	1/1:1,14:15:36.02:329,36,0	1/1:4,24:28:66.03:604,66,0	1/1:4,9:13:20.99:192,21,0	1/1:4,29:33:75.03:686,75,0	1/1:0,29:29:81.04:741,81,0	1/1:5,18:23:55.27:497,55,0	1/1:4,13:17:39.01:356,39,0	1/1:0,11:11:33.02:302,33,0	1/1:2,14:16:42.02:384,42,0	1/1:1,10:11:30.02:275,30,0	1/1:2,27:30:77.08:692,77,0	1/1:1,12:13:30.02:275,30,0	1/1:7,23:30:69:621,69,0	1/1:4,21:25:60.03:549,60,0	1/1:0,11:11:27.01:247,27,0
chr10	23411696	.	AT	A	318.91	PASS	AC=4;AF=0.074;AN=54;BaseQRankSum=4.227;DP=322;FS=9.916;HRun=8;HaplotypeScore=36.6451;InbreedingCoeff=0.8144;MQ=79.17;MQ0=3;MQRankSum=0.648;QD=14.50;ReadPosRankSum=1.957;VQSLOD=2.0092;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:74.01:0,74,860	0/0:8,0:8:21.05:0,21,244	0/0:21,1:16:24.74:0,25,224	0/0:19,0:8:18.48:0,18,183	0/0:11,0:11:24.07:0,24,289	0/0:6,0:6:18.06:0,18,217	0/0:9,0:9:20.76:0,21,252	0/0:33,0:33:72.22:0,72,869	0/0:4,0:4:12.04:0,12,144	0/0:10,0:10:30.09:0,30,362	0/0:13,0:13:36.11:0,36,434	0/0:6,0:6:18.06:0,18,217	0/0:4,0:4:9.02:0,9,97	0/0:3,0:3:6.02:0,6,72	1/1:2,13:15:33.05:319,33,0	1/1:1,6:7:12.02:116,12,0	0/0:15,0:15:45.14:0,45,543	0/0:16,0:16:42.13:0,42,506	0/0:16,0:16:39.12:0,39,470	0/0:10,0:10:27.08:0,27,326	0/0:5,0:5:12.04:0,12,145	0/0:3,0:3:6.02:0,6,72	0/0:8,0:8:18.06:0,18,217	./.	0/0:16,0:16:36.10:0,36,423	0/0:15,0:15:42.10:0,42,482	0/0:7,0:7:18.04:0,18,201	0/0:11,0:11:33.10:0,33,397
chr10	23412045	.	G	GA	1206.11	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-8.318;DP=619;FS=2.910;HRun=9;HaplotypeScore=62.6159;InbreedingCoeff=0.9919;MQ=66.95;MQ0=1;MQRankSum=0.002;QD=24.61;ReadPosRankSum=1.324;VQSLOD=4.6240;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:98.66:0,99,859	0/0:9,0:9:20.99:0,21,182	0/0:13,0:13:27.72:0,28,204	0/0:15,0:15:23.93:0,24,202	0/0:20,0:21:56.02:0,56,475	0/0:17,0:17:44.96:0,45,386	0/0:25,0:25:56.96:0,57,494	0/0:45,0:45:98.94:0,99,856	0/0:18,0:18:53.99:0,54,469	0/0:24,0:24:62.96:0,63,545	0/0:18,0:18:53.99:0,54,469	0/0:14,0:14:41.98:0,42,361	0/0:22,0:22:62.99:0,63,547	0/0:18,0:18:41.97:0,42,365	1/1:0,22:22:63.17:697,63,0	1/1:5,22:27:57.15:631,57,0	0/0:44,0:44:99:0,106,911	0/0:29,0:29:79.80:0,80,682	0/0:23,0:22:50.96:0,51,443	0/0:16,0:16:38.66:0,39,323	0/0:23,0:23:56.96:0,57,490	0/0:15,0:15:41.99:0,42,364	0/0:13,0:13:32.98:0,33,286	0/0:27,0:27:80.98:0,81,703	0/0:14,0:14:38.98:0,39,335	0/0:29,0:29:83.97:0,84,727	0/0:31,0:31:77.96:0,78,674	0/0:6,0:6:18:0,18,156
chr10	23412239	.	G	GA	11391.79	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=4.035;DP=593;FS=1.896;HRun=6;HaplotypeScore=108.4725;InbreedingCoeff=0.9901;MQ=66.22;MQ0=0;MQRankSum=-0.313;QD=32.00;ReadPosRankSum=3.768;VQSLOD=3.9382;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,36:40:99:1283,102,0	1/1:0,12:12:33.11:415,33,0	0/0:25,0:25:49.25:0,49,470	0/0:17,0:16:17.26:0,17,243	1/1:2,17:19:48.15:604,48,0	1/1:1,19:20:54.17:679,54,0	1/1:1,26:27:66.21:830,66,0	0/0:31,0:31:69.14:0,69,699	1/1:0,12:12:33.11:415,33,0	1/1:3,30:33:87.26:1071,87,0	1/1:3,17:20:41.92:504,42,0	1/1:3,14:17:39.12:491,39,0	1/1:3,20:23:60.19:754,60,0	1/1:2,13:15:39.12:488,39,0	1/1:1,21:22:57.18:717,57,0	1/1:4,21:25:57.18:716,57,0	0/0:36,0:36:99:0,99,1002	0/0:26,0:26:75.14:0,75,756	0/0:20,0:20:54.05:0,54,525	0/0:11,0:11:33.08:0,33,336	0/0:20,0:20:54.11:0,54,545	1/1:0,18:18:54.17:678,54,0	1/1:1,18:19:51.16:634,51,0	1/1:1,18:19:54.11:659,54,0	1/1:1,14:15:36.12:453,36,0	0/0:25,0:25:66.12:0,66,657	0/0:22,0:22:60.10:0,60,599	0/0:3,0:3:9.02:0,9,92
chr10	23413212	.	G	GGT	2903.23	PASS	AB=0.756;AC=34;AF=0.607;AN=56;BaseQRankSum=14.240;DP=506;FS=10.870;HRun=0;HaplotypeScore=130.0848;InbreedingCoeff=0.3311;MQ=78.60;MQ0=0;MQRankSum=-1.030;QD=7.87;ReadPosRankSum=7.673;VQSLOD=2.1514;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:22:14.05:188,14,0	1/1:5,0:5:9:46,9,0	0/0:16,0:15:35.27:0,35,533	0/0:16,0:16:18.95:0,19,243	1/1:26,1:28:4.72:417,5,0	1/1:20,0:20:7.58:128,8,0	0/1:12,0:12:26.22:26,0,89	0/0:35,0:35:99:0,102,1501	0/1:17,0:17:9.70:52,0,10	0/1:19,0:20:4.96:103,0,5	1/1:24,1:26:35.94:528,36,0	1/1:12,0:12:24.17:122,24,0	1/1:13,1:14:28.99:187,29,0	1/1:11,0:11:15.48:56,15,0	0/1:2,0:17:1.71:253,0,2	1/1:2,1:18:1.29:304,1,0	1/1:0,0:16:0.47:6,0,0	0/1:2,0:19:4.40:4,0,16	0/1:2,0:17:32.34:32,0,41	0/1:3,0:24:9.63:37,0,10	0/0:3,0:16:5.31:0,5,71	1/1:10,0:10:1.50:84,1,0	1/1:15,0:16:27.02:134,27,0	1/1:12,0:12:20.35:74,20,0	0/1:32,0:33:29.76:305,0,30	0/0:18,0:18:54.15:0,54,794	0/0:33,0:32:99:0,99,1555	0/0:3,0:3:9.03:0,9,146
chr10	23413219	.	T	TTC	12696.50	PASS	AB=1.000;AC=36;AF=0.643;AN=56;BaseQRankSum=7.432;DP=510;FS=0.856;HRun=0;HaplotypeScore=93.4421;InbreedingCoeff=0.7916;MQ=74.00;MQ0=0;MQRankSum=-0.676;QD=37.02;ReadPosRankSum=5.974;VQSLOD=6.9693;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,20:25:56.98:1051,57,0	1/1:0,5:5:12.04:231,12,0	0/0:13,0:12:33.07:0,33,401	0/0:13,0:13:4.45:0,4,102	1/1:3,23:32:89.73:1429,90,0	1/1:0,18:21:51.17:982,51,0	1/1:1,8:9:15.05:289,15,0	0/0:37,0:37:99:0,108,1510	1/1:0,15:16:36.12:694,36,0	1/1:1,17:18:52.99:961,53,0	1/1:4,16:27:72.07:1253,72,0	1/1:0,14:14:30.10:577,30,0	1/1:1,13:14:38.87:725,39,0	1/1:0,11:11:27.09:521,27,0	1/1:14,0:14:35.82:272,36,0	1/1:18,0:18:15.29:270,15,0	0/0:17,0:17:10.53:0,11,36	0/0:18,0:18:10.54:0,11,37	0/1:15,0:15:23.13:23,0,24	0/1:24,0:24:14.86:15,0,27	0/0:15,0:15:14.56:0,15,72	1/1:1,14:15:29.93:486,30,0	1/1:2,16:18:39.13:743,39,0	1/1:0,14:14:30.10:578,30,0	1/1:2,28:33:87.08:1596,87,0	0/0:17,0:17:51.16:0,51,740	0/0:34,0:33:99:0,102,1482	0/0:3,0:3:9.03:0,9,135
chr10	23414172	.	AT	A	1294.37	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-1.765;DP=382;FS=0.000;HRun=4;HaplotypeScore=81.4420;InbreedingCoeff=0.8937;MQ=72.39;MQ0=0;MQRankSum=-3.199;QD=25.89;ReadPosRankSum=-1.124;VQSLOD=2.0464;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:33.07:0,33,440	0/0:4,0:4:12.04:0,12,168	0/0:10,0:10:30.10:0,30,403	0/0:3,0:3:9.02:0,9,113	0/0:25,0:25:69.23:0,69,965	0/0:23,0:23:63.21:0,63,882	0/0:11,0:11:21.07:0,21,294	0/0:48,0:48:99:0,129,1774	0/0:10,0:10:27.09:0,27,377	0/0:21,0:21:60.20:0,60,834	0/0:21,0:21:60.20:0,60,837	0/0:13,0:13:39.13:0,39,546	0/0:15,0:15:39.13:0,39,544	0/0:7,0:7:15.05:0,15,210	0/0:17,0:17:39.13:0,39,545	0/0:14,0:14:33.11:0,33,462	1/1:4,9:12:27.08:323,27,0	1/1:0,4:4:6.02:72,6,0	1/1:4,7:11:27.07:314,27,0	1/1:2,13:15:42.13:501,42,0	1/1:0,7:7:21.06:252,21,0	0/0:5,0:5:12.04:0,12,168	0/0:4,0:4:12.04:0,12,168	0/0:2,0:2:3.01:0,3,42	0/0:17,0:17:45.15:0,45,630	0/0:20,0:20:54.18:0,54,752	0/0:24,0:24:72.24:0,72,1007	0/0:5,0:5:15.05:0,15,210
chr10	23414195	.	C	CAT	4589.81	PASS	AB=0.684;AC=41;AF=0.788;AN=52;BaseQRankSum=9.502;DP=358;FS=1.762;HRun=0;HaplotypeScore=75.9431;InbreedingCoeff=0.7372;MQ=62.71;MQ0=0;MQRankSum=-1.726;QD=18.07;ReadPosRankSum=4.112;VQSLOD=4.6695;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:14:17.93:139,18,0	1/1:4,0:4:8.97:69,9,0	./.	0/0:2,0:1:2.99:0,3,24	1/1:26,0:26:53.78:414,54,0	1/1:20,0:20:35.86:275,36,0	1/1:7,0:7:11.95:92,12,0	0/0:46,0:46:90.26:0,90,1104	1/1:11,0:11:26.72:194,27,0	1/1:22,0:22:56.69:440,57,0	1/1:18,0:18:38.83:296,39,0	1/1:10,0:10:29.89:231,30,0	1/1:12,0:12:23.91:185,24,0	1/1:6,0:6:8.97:69,9,0	1/1:14,0:14:26.90:207,27,0	1/1:13,0:13:23.91:184,24,0	1/1:2,13:14:30.10:491,30,0	1/1:1,7:8:18.06:295,18,0	1/1:4,7:10:18.06:295,18,0	0/1:7,6:12:16.13:273,0,16	1/1:2,1:3:3.01:49,3,0	1/1:3,0:3:2.99:23,3,0	1/1:5,0:5:11.95:92,12,0	./.	1/1:19,0:19:35.86:277,36,0	0/0:18,0:18:39.12:0,39,484	0/0:24,0:24:63.18:0,63,768	0/0:9,0:9:27.08:0,27,333
chr10	23414201	.	T	TATAC	11385.74	PASS	AB=1.000;AC=42;AF=0.750;AN=56;BaseQRankSum=0.206;DP=342;FS=1.025;HRun=0;HaplotypeScore=62.3345;InbreedingCoeff=0.6338;MQ=61.67;MQ0=0;MQRankSum=-1.401;QD=46.66;ReadPosRankSum=5.548;VQSLOD=5.1251;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,12:13:18.06:484,18,0	1/1:0,3:3:9.03:243,9,0	0/0:3,0:3:5.37:0,5,33	0/0:2,0:1:2.22:0,2,7	1/1:3,24:27:54.18:1453,54,0	1/1:2,16:19:36.12:968,36,0	1/1:0,8:8:12.04:322,12,0	0/0:42,0:42:99:0,117,1942	1/1:2,9:11:27.09:713,27,0	1/1:1,21:23:69.20:1628,69,0	1/1:1,14:15:39.13:1046,39,0	1/1:0,10:10:30.10:808,30,0	1/1:0,9:10:24.08:645,24,0	1/1:1,5:7:9.03:242,9,0	1/1:0,14:14:27.09:727,27,0	1/1:0,13:13:24.08:647,24,0	1/1:15,0:14:11.52:31,12,0	1/1:8,0:8:0.88:11,1,0	0/1:9,0:8:11.25:11,0,14	0/1:12,0:11:6.85:7,0,68	1/1:3,0:3:2.80:7,3,0	1/1:0,2:2:3.01:81,3,0	1/1:0,4:4:12.04:322,12,0	1/1:1,0:1:2.97:20,3,0	1/1:1,16:17:36.12:970,36,0	0/0:17,0:17:45.13:0,45,791	0/0:23,0:23:69.20:0,69,1229	0/0:11,0:11:33:0,33,549
chr10	23415021	.	GA	G	5071.16	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=14.242;DP=691;FS=5.550;HRun=2;HaplotypeScore=74.8005;InbreedingCoeff=0.9975;MQ=58.31;MQ0=6;MQRankSum=-2.181;QD=35.46;ReadPosRankSum=1.439;VQSLOD=5.4225;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,117,1749	0/0:6,0:6:18.06:0,18,270	0/0:34,0:20:60.16:0,60,832	0/0:24,0:15:42.14:0,42,623	0/0:24,0:24:72.24:0,72,1072	0/0:21,0:21:63.20:0,63,923	0/0:29,0:29:81.26:0,81,1176	0/0:31,0:31:90.25:0,90,1300	0/0:20,0:20:60.18:0,60,877	0/0:26,0:26:75.24:0,75,1092	0/0:17,0:17:51.17:0,51,764	0/0:24,0:24:72.24:0,72,1059	0/0:27,0:27:78.26:0,78,1168	0/0:23,0:23:69.22:0,69,1014	0/0:38,0:38:99:0,111,1663	0/0:30,0:30:87.29:0,87,1304	1/1:1,41:42:95.43:1529,95,0	1/1:0,10:10:30.10:387,30,0	1/1:1,30:30:84.27:1090,84,0	1/1:0,21:21:54.18:701,54,0	1/1:1,38:39:99:1363,105,0	0/0:23,0:23:69.23:0,69,1033	0/0:13,0:13:39.13:0,39,583	0/0:30,0:30:84.22:0,84,1196	0/0:12,0:12:36.12:0,36,540	0/0:16,0:16:48.16:0,48,719	0/0:30,0:30:90.29:0,90,1325	0/0:9,0:9:24.06:0,24,339
chr10	23415276	.	AT	A	11895.25	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=13.972;DP=536;FS=1.480;HRun=1;HaplotypeScore=74.6635;InbreedingCoeff=0.9926;MQ=64.88;MQ0=0;MQRankSum=-1.012;QD=36.16;ReadPosRankSum=4.378;VQSLOD=5.2127;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,30:30:75.25:1045,75,0	1/1:0,8:8:24.08:335,24,0	0/0:18,0:18:11.67:0,12,614	0/0:12,0:12:30.52:0,31,382	1/1:0,38:38:99:1497,111,0	1/1:0,12:12:30.10:419,30,0	1/1:0,16:16:36.12:502,36,0	0/0:27,0:27:78.19:0,78,988	1/1:0,20:20:45.15:628,45,0	1/1:2,25:27:74.66:1068,75,0	1/1:0,23:23:66.05:834,66,0	1/1:1,20:21:47.79:670,48,0	1/1:0,19:19:54.18:754,54,0	1/1:0,17:17:51.17:712,51,0	1/1:0,16:16:45.15:629,45,0	1/1:0,10:10:21.07:293,21,0	0/0:18,0:18:51.16:0,51,726	0/0:17,0:17:51.04:0,51,670	0/0:14,0:14:42.10:0,42,584	0/0:26,0:26:78.25:0,78,1121	0/0:6,0:6:18.05:0,18,244	1/1:0,18:18:48.07:626,48,0	1/1:0,19:19:45.07:628,45,0	1/1:0,11:11:30.10:419,30,0	1/1:0,24:24:60.20:836,60,0	0/0:29,0:29:87.27:0,87,1233	0/0:32,0:32:96.27:0,96,1339	0/0:8,0:8:24.05:0,24,312
chr10	23416533	.	GTC	G	1404.36	PASS	AB=0.951;AC=19;AF=0.339;AN=56;BaseQRankSum=1.250;DP=483;FS=2.926;HRun=0;HaplotypeScore=146.4521;InbreedingCoeff=0.2957;MQ=45.95;MQ0=7;MQRankSum=3.916;QD=6.66;ReadPosRankSum=-0.257;VQSLOD=2.9822;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:19,0:20:13.90:14,0,15	0/1:4,0:4:3.10:3,0,24	0/0:18,0:8:9.71:0,10,200	0/0:44,0:14:17.77:0,18,154	0/0:16,0:19:9.66:0,10,98	0/0:13,0:17:6.19:0,6,69	0/1:12,0:13:8.14:47,0,8	0/0:26,0:26:51.17:0,51,807	0/0:9,0:10:5.97:0,6,109	0/1:15,0:16:24.65:25,0,120	0/1:17,0:17:5.84:6,0,85	0/0:5,0:5:4.78:0,5,24	0/0:8,0:9:16.79:0,17,113	0/0:19,0:19:33.09:0,33,146	0/0:20,0:21:17.60:0,18,100	0/1:12,0:13:6.92:7,0,51	1/1:9,6:14:17.13:171,17,0	1/1:3,7:10:18.04:231,18,0	1/1:12,6:16:27.07:321,27,0	1/1:5,14:19:45.14:559,45,0	1/1:7,10:15:12.72:138,13,0	0/1:15,0:18:13.91:14,0,36	0/1:14,0:14:4.39:4,0,42	0/0:8,0:8:10.07:0,10,47	0/1:16,0:16:22.62:44,0,23	0/0:27,0:27:69.24:0,69,1127	0/0:35,1:36:55.80:0,56,1428	0/0:13,0:13:34.28:0,34,445
chr10	23416547	.	CTG	C	477.61	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=2.476;DP=490;FS=2.854;HRun=0;HaplotypeScore=172.7529;InbreedingCoeff=0.9116;MQ=47.52;MQ0=8;MQRankSum=-0.502;QD=6.92;ReadPosRankSum=-0.502;VQSLOD=2.9284;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:16,1:17:25.48:0,25,151	0/0:4,0:4:7.81:0,8,70	0/0:23,0:8:10.61:0,11,234	0/0:61,0:16:16.02:0,16,209	0/0:18,0:18:28.93:0,29,279	0/0:15,0:15:28.53:0,29,228	0/0:10,0:10:19.26:0,19,87	0/0:24,0:23:63.17:0,63,1033	0/0:9,0:9:25.01:0,25,263	0/0:18,0:18:43.04:0,43,379	0/0:15,0:14:29.01:0,29,245	0/0:5,0:5:8.84:0,9,72	0/0:10,1:11:16.54:0,17,216	0/0:21,0:21:50.72:0,51,430	0/0:20,1:21:46.71:0,47,372	0/0:12,0:12:27.08:0,27,225	1/1:12,0:11:11.39:75,11,0	1/1:9,0:9:20.27:121,20,0	1/1:13,1:13:11.26:151,11,0	1/1:18,1:19:43.32:246,43,0	1/1:15,0:14:9.14:49,9,0	0/0:19,0:19:24.42:0,24,180	0/0:15,0:15:19.83:0,20,186	0/0:9,0:9:11.78:0,12,118	0/0:20,0:19:39.11:0,39,260	0/0:28,0:28:84.24:0,84,1422	0/0:33,0:33:84.62:0,85,1718	0/0:12,0:12:33.03:0,33,515
chr10	23416561	.	CTG	C	214.10	PASS	AB=0.873;AC=6;AF=0.107;AN=56;BaseQRankSum=7.541;DP=514;FS=19.352;HRun=0;HaplotypeScore=197.1770;InbreedingCoeff=-0.1225;MQ=44.52;MQ0=11;MQRankSum=-5.728;QD=2.38;ReadPosRankSum=-3.057;VQSLOD=0.7721;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:17,1:18:19.51:0,20,107	0/0:4,0:4:7.17:0,7,42	0/0:29,0:8:21.05:0,21,317	0/0:63,0:17:22.65:0,23,272	0/0:20,4:23:25.48:0,25,121	0/1:19,3:22:19.05:19,0,108	0/0:8,0:8:1.67:0,2,22	0/0:26,0:26:74.15:0,74,1197	0/0:10,0:10:5.74:0,6,99	0/1:17,2:19:54.82:176,0,55	0/0:11,3:14:18.90:0,19,108	0/1:5,4:9:11.02:29,0,11	0/1:12,1:14:45.03:91,0,45	0/0:19,0:19:45.56:0,46,275	0/0:17,2:19:33.68:0,34,203	0/1:14,2:16:11.46:11,0,61	0/0:10,1:10:10.09:0,10,98	0/0:5,0:5:11.89:0,12,121	0/1:10,0:9:4.85:5,0,91	0/0:18,0:18:34.54:0,35,406	0/0:16,0:15:4.54:0,5,58	0/0:18,2:20:13.06:0,13,91	0/0:18,2:20:18.16:0,18,91	0/0:8,0:8:7.72:0,8,35	0/0:18,1:18:33.68:0,34,221	0/0:29,0:29:87.26:0,87,1542	0/0:32,0:32:96.27:0,96,1707	0/0:11,0:11:30.10:0,30,575
chr10	23416563	.	G	GTCTC	4274.70	PASS	AB=0.917;AC=43;AF=0.768;AN=56;BaseQRankSum=8.966;DP=530;FS=5.788;HRun=0;HaplotypeScore=205.8724;InbreedingCoeff=0.7716;MQ=43.84;MQ0=12;MQRankSum=-6.556;QD=12.68;ReadPosRankSum=-5.746;VQSLOD=2.9109;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:22,1:23:19.84:169,20,0	1/1:4,0:4:8.80:53,9,0	0/0:29,0:8:17.89:0,18,199	0/0:65,0:18:13.08:0,13,240	1/1:23,0:22:27.29:284,27,0	1/1:23,0:23:26.23:184,26,0	1/1:7,0:7:1.44:9,1,0	0/0:27,0:26:72.20:0,72,1177	1/1:10,0:10:23.81:227,24,0	1/1:19,0:19:39.56:380,40,0	1/1:14,0:14:20.63:179,21,0	1/1:11,0:11:10.22:80,10,0	1/1:14,0:14:26.28:212,26,0	1/1:21,0:21:45.33:346,45,0	1/1:19,0:19:33.25:241,33,0	1/1:16,0:16:12.40:206,12,0	1/1:10,2:11:11.64:179,12,0	1/1:3,1:4:6.02:120,6,0	0/1:10,1:10:27.49:113,0,27	1/1:18,2:20:30.88:510,31,0	1/1:14,3:16:4.18:58,4,0	1/1:20,0:20:17.31:150,17,0	1/1:23,0:23:15.07:212,15,0	1/1:8,0:8:8.77:109,9,0	1/1:18,0:17:30.70:254,31,0	0/0:29,0:29:84.26:0,84,1486	0/0:32,0:32:90.30:0,90,1649	0/0:11,0:11:30.10:0,30,552
chr10	23416565	.	CTT	C	109.93	PASS	AB=0.961;AC=12;AF=0.214;AN=56;BaseQRankSum=4.848;DP=526;FS=1.918;HRun=3;HaplotypeScore=205.3325;InbreedingCoeff=0.1966;MQ=43.61;MQ0=12;MQRankSum=-2.260;QD=0.88;ReadPosRankSum=-0.467;VQSLOD=-0.5151;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,3:23:12.33:0,12,66	0/0:5,0:5:2.91:0,3,17	0/0:30,0:8:17.59:0,18,236	0/0:67,0:20:28.43:0,28,331	0/0:23,0:22:4.88:0,5,77	0/0:23,0:23:0.11:0,0,105	0/0:7,1:8:1.14:0,1,5	0/0:26,0:25:75.25:0,75,1401	0/0:10,0:10:17.31:0,17,87	0/1:19,0:19:38.50:43,0,39	0/0:14,0:14:14.21:0,14,73	0/0:11,0:11:4.07:0,4,20	0/1:13,0:14:12.97:13,0,28	0/0:20,0:20:43.80:0,44,243	0/0:19,0:19:32.97:0,33,191	0/0:16,0:16:16.83:0,17,75	1/1:11,1:11:4.02:57,4,0	1/1:3,0:3:2.82:32,3,0	0/1:10,0:9:14.46:14,0,19	1/1:20,0:20:4.43:56,4,0	0/1:15,1:15:4.09:17,0,4	0/0:18,1:19:6.92:0,7,76	0/1:23,0:23:4.65:5,0,37	0/1:7,1:8:13.55:14,0,14	0/0:16,0:15:20.82:0,21,117	0/0:29,0:29:84.27:0,84,1590	0/0:31,0:31:93.32:0,93,1780	0/0:11,0:11:33.08:0,33,600
chr10	23416575	.	CTG	C	1669.25	PASS	AB=0.722;AC=24;AF=0.429;AN=56;BaseQRankSum=8.233;DP=505;FS=31.397;HRun=0;HaplotypeScore=192.2338;InbreedingCoeff=0.1502;MQ=42.75;MQ0=12;MQRankSum=-9.004;QD=7.16;ReadPosRankSum=-2.138;VQSLOD=1.5066;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,9:22:5.85:36,6,0	0/1:3,4:7:7.21:57,0,7	0/0:27,0:5:9.01:0,9,139	0/0:66,1:24:29.82:0,30,359	0/0:11,14:24:11.02:0,11,80	1/1:6,11:17:6.96:94,7,0	1/1:3,4:7:3.73:46,4,0	0/0:25,0:24:72.20:0,72,1305	0/1:6,2:8:33.55:34,0,56	0/1:7,11:18:62.53:480,0,63	0/0:7,5:12:2.06:0,2,19	0/1:1,12:13:9.24:125,0,9	0/1:6,9:15:40.14:303,0,40	0/0:11,5:16:5.99:0,6,48	0/1:11,8:19:10.65:11,0,24	0/1:5,8:13:41.20:163,0,41	0/1:11,1:11:35.98:36,0,61	0/1:4,0:4:2.18:2,0,15	1/1:4,8:11:30.92:411,31,0	1/1:8,9:17:4.89:22,5,0	0/1:12,5:16:0.28:0,0,1	1/1:9,7:16:1.31:3,1,0	0/0:8,12:20:1.20:0,1,4	0/0:7,1:8:4.59:0,5,27	1/1:7,9:15:2.50:10,2,0	0/0:27,0:27:81.22:0,81,1516	0/0:34,0:34:99:0,99,1739	0/0:9,0:9:27.09:0,27,508
chr10	23416577	.	G	GTC	577.90	PASS	AB=0.891;AC=26;AF=0.481;AN=54;BaseQRankSum=6.691;DP=517;FS=15.134;HRun=0;HaplotypeScore=207.2628;InbreedingCoeff=0.4094;MQ=42.83;MQ0=13;MQRankSum=-7.092;QD=2.66;ReadPosRankSum=-1.928;VQSLOD=0.8524;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,4:24:0.80:0,1,2	1/1:6,1:7:5.85:48,6,0	0/0:32,0:7:9.02:0,9,105	0/0:63,0:22:25.90:0,26,254	1/1:21,3:23:2.16:22,2,0	1/1:18,0:18:5.15:43,5,0	1/1:7,0:7:2.06:25,2,0	0/0:27,0:26:57.19:0,57,780	1/1:6,2:8:6.01:81,6,0	1/1:20,1:21:25.05:143,25,0	0/0:10,3:13:0.47:0,0,1	0/1:13,0:13:4.29:22,0,4	1/1:14,1:15:22.70:189,23,0	./.	1/1:12,7:19:2.17:14,2,0	1/1:11,2:13:3.43:40,3,0	0/1:11,2:12:38.56:39,0,39	0/0:4,0:4:4.79:0,5,27	0/1:12,0:11:17.24:23,0,17	0/0:18,0:18:0.85:0,1,3	0/0:17,0:16:1.38:0,1,4	0/1:9,7:16:0.18:0,0,1	1/1:19,3:22:1.73:22,2,0	1/1:7,2:9:2.63:22,3,0	0/0:11,4:14:0.94:0,1,2	0/0:27,0:27:78.20:0,78,1049	0/0:35,0:35:96.27:0,96,1267	0/0:9,0:9:24.05:0,24,309
chr10	23416629	.	GTCTC	G	11997.61	PASS	AB=0.543;AC=43;AF=0.768;AN=56;BaseQRankSum=12.212;DP=586;FS=8.275;HRun=0;HaplotypeScore=176.6115;InbreedingCoeff=0.8230;MQ=50.29;MQ0=5;MQRankSum=-3.430;QD=28.03;ReadPosRankSum=5.479;VQSLOD=4.1058;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,34:42:45.95:752,46,0	1/1:0,8:8:18.01:315,18,0	0/0:20,0:9:3.35:0,3,264	0/0:35,0:11:21.20:0,21,386	1/1:4,22:25:30.05:468,30,0	1/1:1,28:29:64.10:1104,64,0	1/1:4,3:8:4.84:40,5,0	0/0:36,0:35:78.26:0,78,1748	1/1:1,8:9:18.06:313,18,0	1/1:7,21:28:63.17:1044,63,0	1/1:1,19:20:30.99:525,31,0	1/1:3,16:19:41.41:733,41,0	1/1:3,16:19:42.14:733,42,0	1/1:1,8:9:18.06:315,18,0	1/1:4,13:17:34.04:580,34,0	1/1:3,11:14:26.95:455,27,0	0/1:3,16:19:25.46:438,0,25	1/1:1,9:10:11.99:210,12,0	1/1:9,23:31:66.21:1094,66,0	1/1:5,31:36:46.85:791,47,0	1/1:7,6:12:9.90:160,10,0	1/1:4,11:15:24.42:421,24,0	1/1:2,21:23:35.79:576,36,0	1/1:1,13:14:24.55:422,25,0	1/1:4,14:17:31.04:511,31,0	0/0:25,0:25:66.23:0,66,1619	0/0:26,0:25:72.23:0,72,1707	0/0:16,0:15:39.03:0,39,858
chr10	23417558	.	A	AT	6459.67	PASS	AC=42;AF=0.778;AN=54;BaseQRankSum=-0.222;DP=316;FS=5.192;HRun=4;HaplotypeScore=37.6264;InbreedingCoeff=0.8842;MQ=80.63;MQ0=1;MQRankSum=0.548;QD=32.62;ReadPosRankSum=3.033;VQSLOD=4.9254;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,13:13:27.09:369,27,0	1/1:0,3:3:9.03:123,9,0	0/0:6,0:6:11.55:0,12,96	0/0:13,0:14:20.94:0,21,218	1/1:0,6:6:15.05:201,15,0	1/1:2,16:18:48.13:637,48,0	1/1:0,7:7:12.04:161,12,0	0/0:34,0:34:90.23:0,90,997	1/1:2,12:14:36.12:492,36,0	1/1:0,5:5:15.05:199,15,0	1/1:0,3:3:6.02:82,6,0	1/1:0,7:6:18.06:246,18,0	1/1:0,6:6:18.06:246,18,0	1/1:0,9:9:24.08:328,24,0	1/1:2,14:16:21.07:287,21,0	1/1:0,17:17:39.11:534,39,0	1/1:0,6:6:12.04:164,12,0	1/1:0,7:7:21.07:287,21,0	1/1:2,30:32:87.24:1132,87,0	1/1:1,10:11:33.11:438,33,0	1/1:0,7:7:18.06:246,18,0	./.	1/1:2,0:2:6.02:79,6,0	1/1:0,4:4:9.03:123,9,0	1/1:0,5:5:6.02:82,6,0	0/0:26,0:26:69.17:0,69,760	0/0:23,0:23:60.78:0,61,710	0/0:15,0:15:36.02:0,36,363
chr10	23421665	.	AT	A	2292.27	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=10.830;DP=428;FS=0.997;HRun=6;HaplotypeScore=41.6864;InbreedingCoeff=0.9711;MQ=72.37;MQ0=0;MQRankSum=-1.745;QD=24.39;ReadPosRankSum=2.168;VQSLOD=2.9123;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:33.11:0,33,429	0/0:8,0:8:24.08:0,24,316	0/0:6,0:6:18.03:0,18,189	0/0:8,0:7:15.52:0,16,186	0/0:31,0:31:93.30:0,93,1212	0/0:13,0:13:36.10:0,36,458	0/0:10,0:10:30.10:0,30,395	0/0:41,0:41:99:0,114,1473	0/0:11,0:11:33.11:0,33,434	0/0:26,0:26:63.20:0,63,818	0/0:17,0:17:48.16:0,48,632	0/0:10,0:10:30.09:0,30,382	0/0:10,0:10:30.10:0,30,392	0/0:13,0:13:39.13:0,39,513	0/0:13,0:13:39.11:0,39,499	0/0:8,0:8:24.08:0,24,316	1/1:2,27:29:75.19:806,75,0	1/1:3,17:20:39.10:418,39,0	1/1:3,15:18:45.09:469,45,0	1/1:0,19:19:51.13:548,51,0	1/1:1,7:8:21.05:226,21,0	0/0:8,0:8:21.07:0,21,274	0/0:11,0:11:33.11:0,33,430	0/0:4,0:4:12.03:0,12,144	0/0:22,0:22:66.21:0,66,869	0/0:29,0:29:87.28:0,87,1142	0/0:21,0:21:48.16:0,48,631	0/0:3,0:3:9.03:0,9,118
chr10	23422682	.	G	GA	2693.84	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=0.580;DP=495;FS=2.864;HRun=6;HaplotypeScore=50.2826;InbreedingCoeff=0.9955;MQ=69.53;MQ0=1;MQRankSum=-0.490;QD=30.96;ReadPosRankSum=0.818;VQSLOD=4.1932;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:69.12:0,69,694	0/0:10,0:10:27.06:0,27,275	0/0:24,0:18:48.10:0,48,484	0/0:20,0:17:26.35:0,26,248	0/0:24,0:24:72.16:0,72,735	0/0:9,0:9:24.05:0,24,245	0/0:8,0:8:24.05:0,24,245	0/0:32,0:32:75.14:0,75,752	0/0:13,0:13:36.08:0,36,367	0/0:17,0:17:39.08:0,39,398	0/0:23,0:23:60.13:0,60,612	0/0:13,0:13:39.09:0,39,398	0/0:13,0:13:36.08:0,36,366	0/0:20,0:20:54.12:0,54,550	0/0:19,0:19:54.12:0,54,550	0/0:15,0:15:42.09:0,42,428	1/1:2,21:23:60.19:755,60,0	1/1:1,14:15:42.09:510,42,0	1/1:1,18:19:54.14:662,54,0	1/1:3,20:23:57.18:714,57,0	1/1:0,7:7:18.06:226,18,0	0/0:18,0:18:48.10:0,48,490	0/0:21,0:21:63.14:0,63,643	0/0:12,0:12:33.07:0,33,336	0/0:23,0:23:54.12:0,54,550	0/0:17,0:17:39.08:0,39,398	0/0:24,0:24:66.15:0,66,672	0/0:7,0:7:21.05:0,21,214
chr10	23423241	.	TC	T	2968.74	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=12.943;DP=663;FS=3.802;HRun=3;HaplotypeScore=70.3982;InbreedingCoeff=0.9793;MQ=78.29;MQ0=0;MQRankSum=-1.267;QD=31.25;ReadPosRankSum=0.198;VQSLOD=3.5000;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:45.15:0,45,647	0/0:15,0:15:45.15:0,45,648	0/0:22,0:22:60.16:0,60,762	0/0:21,0:21:55.95:0,56,744	0/0:45,0:45:99:0,132,1877	0/0:26,0:26:78.26:0,78,1123	0/0:13,0:13:39.11:0,39,542	0/0:37,0:37:99:0,102,1435	0/0:23,0:23:69.20:0,69,957	0/0:29,0:29:84.28:0,84,1210	0/0:32,0:32:96.32:0,96,1374	0/0:23,0:23:66.22:0,66,951	0/0:23,0:23:66.22:0,66,947	0/0:20,0:20:57.19:0,57,820	0/0:31,0:31:90.29:0,90,1275	0/0:26,0:26:72.23:0,72,1020	1/1:0,5:5:12.04:149,12,0	1/1:0,16:16:48.15:595,48,0	1/1:2,17:19:48.13:581,48,0	1/1:2,39:41:68.14:1296,68,0	1/1:0,14:14:42.13:521,42,0	0/0:33,0:33:99:0,99,1426	0/0:28,0:28:84.27:0,84,1193	0/0:13,0:13:39.09:0,39,538	0/0:28,0:28:84.28:0,84,1185	0/0:28,0:28:84.28:0,84,1210	0/0:34,0:34:99:0,102,1447	0/0:3,0:3:9.03:0,9,130
chr10	23428066	.	TA	T	2036.99	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=9.554;DP=566;FS=0.446;HRun=8;HaplotypeScore=55.9968;InbreedingCoeff=0.9879;MQ=73.74;MQ0=1;MQRankSum=-0.590;QD=22.38;ReadPosRankSum=0.819;VQSLOD=3.9622;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:21:57.13:0,57,672	0/0:10,0:10:30.09:0,30,362	0/0:13,0:13:35.80:0,36,357	0/0:13,0:12:20.79:0,21,201	0/0:31,0:31:81.23:0,81,962	0/0:18,0:18:48.15:0,48,580	0/0:13,0:13:27.08:0,27,326	0/0:29,0:29:75.21:0,75,886	0/0:26,0:26:75.23:0,75,905	0/0:29,0:29:78.23:0,78,933	0/0:17,0:17:48.13:0,48,568	0/0:17,0:17:48.08:0,48,562	0/0:16,1:17:19.13:0,19,488	0/0:19,0:19:39.11:0,39,458	0/0:19,0:19:48.13:0,48,568	0/0:20,0:21:57.01:0,57,643	1/1:1,22:23:60.10:579,60,0	1/1:0,4:4:12.02:116,12,0	1/1:7,18:25:48.03:452,48,0	1/1:1,27:28:78.09:745,78,0	1/1:0,11:11:33.05:319,33,0	0/0:21,0:21:54.17:0,54,652	0/0:22,0:23:69.07:0,69,800	0/0:11,0:11:33.10:0,33,398	0/0:34,0:34:96.29:0,96,1160	0/0:25,0:25:72.21:0,72,861	0/0:39,0:40:99:0,117,1390	0/0:7,0:7:18.06:0,18,217
chr10	23428188	.	ATGTGTG	A	3707.93	PASS	AB=0.996;AC=41;AF=0.759;AN=54;BaseQRankSum=-1.620;DP=446;FS=1.107;HRun=0;HaplotypeScore=116.1535;InbreedingCoeff=0.0865;MQ=71.15;MQ0=8;MQRankSum=-1.829;QD=9.94;ReadPosRankSum=2.448;VQSLOD=2.6251;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:31,0:31:39.65:52,0,40	1/1:6,1:8:18.06:314,18,0	0/0:24,0:13:0:0,0,0	0/0:31,0:23:3.01:0,3,38	1/1:18,0:18:5.54:36,6,0	1/1:13,0:13:9.03:165,9,0	0/1:12,0:10:0.35:120,0,0	0/1:20,0:20:41.70:125,0,42	1/1:20,0:21:30.05:485,30,0	1/1:5,0:5:6.02:119,6,0	1/1:5,1:6:3.01:58,3,0	1/1:18,0:18:12.04:209,12,0	1/1:13,4:17:17.91:344,18,0	1/1:15,0:16:19.25:253,19,0	1/1:22,0:23:29.73:211,30,0	0/1:16,0:16:31.95:55,0,32	1/1:21,0:21:3.46:80,3,0	0/1:15,0:15:68.57:69,0,69	0/0:7,0:7:2.84:0,3,14	0/1:18,0:18:45.29:91,0,45	1/1:21,0:19:3.01:42,3,0	0/1:11,0:11:0:0,0,0	1/1:8,1:10:9.03:159,9,0	1/1:12,0:12:2.84:14,3,0	1/1:13,0:15:11.06:133,11,0	1/1:7,6:13:20.35:302,20,0	1/1:12,0:12:18.06:271,18,0	./.
chr10	23428211	.	TGTGTGTGTGTGTGTTGTGTG	T	1939.17	PASS	AB=0.741;AC=9;AF=0.161;AN=56;BaseQRankSum=2.101;DP=506;FS=1.563;HRun=0;HaplotypeScore=208.5647;InbreedingCoeff=0.5117;MQ=45.03;MQ0=24;MQRankSum=0.028;QD=19.99;ReadPosRankSum=0.662;VQSLOD=2.3643;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:44.67:0,45,1005	0/1:7,0:7:51.61:52,0,407	0/0:32,0:5:15.05:0,15,261	0/0:36,0:5:9.03:0,9,155	0/0:15,0:15:33.11:0,33,483	0/0:14,0:14:18.22:0,18,264	0/0:19,0:17:24.08:0,24,509	0/0:27,0:25:68.89:0,69,1351	0/0:20,0:20:42.14:0,42,872	0/0:10,0:9:27.08:0,27,530	0/0:14,0:11:17.60:0,18,247	0/0:15,0:15:20.93:0,21,540	0/0:16,0:16:34:0,34,880	0/0:20,0:20:42.12:0,42,940	0/0:27,0:27:49.54:0,50,1378	0/0:12,0:12:27.55:0,28,506	0/1:5,15:19:23.11:414,0,23	0/1:7,8:15:99:389,0,139	1/1:2,10:12:30.01:422,30,0	1/1:2,15:17:20.99:637,21,0	1/1:5,21:23:3.01:174,3,0	0/0:12,0:12:21.06:0,21,360	0/0:15,0:15:20.42:0,20,498	0/0:16,0:16:8.32:0,8,40	0/0:9,0:9:18.06:0,18,307	0/0:19,0:19:56.68:0,57,2122	0/0:18,0:18:51.15:0,51,2240	0/0:9,0:7:21.01:0,21,254
chr10	23428221	.	TG	T	329.57	PASS	AB=0.974;AC=18;AF=0.321;AN=56;BaseQRankSum=2.941;DP=543;FS=3.409;HRun=1;HaplotypeScore=121.2462;InbreedingCoeff=0.1420;MQ=48.34;MQ0=33;MQRankSum=-1.367;QD=1.34;ReadPosRankSum=3.533;VQSLOD=-0.6934;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:30,1:32:51.59:53,0,52	1/1:8,0:8:5.88:35,6,0	0/0:48,0:8:18.05:0,18,214	0/0:49,0:10:19.64:0,20,267	0/0:11,0:11:6.02:0,6,73	0/0:16,0:16:12.35:0,12,142	0/0:20,0:20:1.34:0,1,92	0/1:27,0:25:5.31:5,0,239	0/1:20,0:20:16.93:17,0,27	0/0:10,0:9:14.58:0,15,189	0/0:15,0:12:2.93:0,3,54	0/0:16,0:16:17.55:0,18,170	0/0:17,0:17:8.88:0,9,145	0/0:18,1:19:13.10:0,13,198	0/1:23,5:27:20.09:185,0,20	0/1:9,0:10:27.57:28,0,28	0/1:19,0:18:3.28:3,0,30	0/0:15,0:15:9.55:0,10,168	0/0:14,0:12:12.68:0,13,146	0/1:17,0:17:0.16:0,0,51	1/1:27,0:24:2.22:7,2,0	0/0:13,0:13:2.85:0,3,34	1/1:14,0:14:6.84:27,7,0	0/0:20,0:20:10.27:0,10,106	0/0:14,0:14:1.90:0,2,27	0/1:21,0:21:47.37:47,0,107	1/1:19,0:19:7.32:65,7,0	1/1:4,0:3:2.51:7,3,0
chr10	23428222	.	GTGT	G	1848.23	PASS	AB=0.986;AC=32;AF=0.571;AN=56;BaseQRankSum=5.831;DP=552;FS=1.791;HRun=0;HaplotypeScore=124.7441;InbreedingCoeff=-0.2249;MQ=48.32;MQ0=33;MQRankSum=-3.030;QD=4.30;ReadPosRankSum=4.523;VQSLOD=2.4545;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:33:25.09:25,0,36	1/1:8,1:9:17.90:171,18,0	0/0:49,0:8:21.04:0,21,242	0/0:49,0:10:20.01:0,20,206	0/0:10,1:11:0.49:0,0,7	0/1:16,0:16:50.14:50,0,57	0/1:18,2:20:53.73:88,0,54	0/1:28,0:26:47.06:47,0,134	1/1:20,3:23:25.68:206,26,0	0/1:10,0:9:28.86:29,0,85	0/1:15,0:12:24.36:47,0,24	0/1:16,0:16:65.84:66,0,95	0/1:17,1:18:99:144,0,162	0/1:19,0:19:71.07:71,0,167	1/1:28,0:27:17.73:161,18,0	0/1:10,0:10:11.71:44,0,12	1/1:19,0:18:5.29:41,5,0	0/1:15,0:15:38.66:125,0,39	0/1:14,0:12:32.99:33,0,64	1/1:17,0:17:13.02:78,13,0	1/1:27,0:24:2.98:21,3,0	0/0:13,0:13:4.29:0,4,17	1/1:14,0:14:8.81:71,9,0	0/1:21,0:21:30.40:30,0,44	0/1:14,0:14:7.50:70,0,7	0/1:19,2:21:68.68:212,0,69	1/1:16,3:19:10.54:184,11,0	0/1:4,0:3:0.16:0,0,13
chr10	23428224	.	GT	G	1755.87	PASS	AB=0.888;AC=32;AF=0.571;AN=56;BaseQRankSum=5.686;DP=567;FS=2.433;HRun=2;HaplotypeScore=119.1405;InbreedingCoeff=-0.2355;MQ=48.29;MQ0=34;MQRankSum=-2.337;QD=4.00;ReadPosRankSum=2.808;VQSLOD=0.8335;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:28,5:33:37.33:42,0,37	1/1:6,3:9:17.06:165,17,0	0/0:53,0:9:24.05:0,24,272	0/0:51,0:10:13.68:0,14,192	0/0:7,4:11:0.49:0,0,7	0/1:16,2:18:69.85:78,0,70	0/1:19,1:20:53.75:71,0,54	0/1:27,1:27:64.87:65,0,154	1/1:15,8:23:25.72:224,26,0	0/1:8,2:9:37.70:38,0,85	0/1:16,1:14:25.58:35,0,26	0/1:10,7:17:66.79:67,0,95	0/1:12,6:18:99:157,0,163	0/1:12,9:21:72.51:73,0,223	1/1:20,7:26:17.99:195,18,0	0/1:10,1:11:26.57:56,0,27	1/1:18,1:18:3.79:13,4,0	0/1:12,2:14:42.59:102,0,43	0/1:14,0:12:32.99:33,0,65	1/1:17,0:17:11.51:50,12,0	1/1:27,0:24:2.22:7,2,0	0/0:11,2:13:4.35:0,4,20	1/1:12,2:14:7.39:61,7,0	0/1:22,1:23:26.05:26,0,44	0/1:12,3:15:8.62:68,0,9	0/1:21,0:21:69.47:142,0,69	1/1:16,2:18:11.27:155,11,0	0/1:4,0:3:0.16:0,0,13
chr10	23428225	.	T	TG	1586.58	PASS	AB=0.981;AC=25;AF=0.446;AN=56;BaseQRankSum=3.670;DP=567;FS=4.803;HRun=1;HaplotypeScore=118.7018;InbreedingCoeff=-0.3009;MQ=48.51;MQ0=34;MQRankSum=-0.669;QD=4.09;ReadPosRankSum=0.316;VQSLOD=0.3528;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:32,2:34:37.25:42,0,37	1/1:8,1:9:9.76:169,10,0	0/0:54,0:10:24.05:0,24,272	0/0:50,0:9:16.93:0,17,197	0/0:11,1:12:0.49:0,0,7	0/1:17,0:17:69.91:78,0,70	0/1:18,1:19:53.56:81,0,54	0/1:28,0:26:59.08:59,0,155	1/1:23,0:23:25.76:226,26,0	0/1:10,0:9:24.60:25,0,85	0/1:17,0:14:30.21:30,0,34	0/1:17,0:17:66.80:67,0,96	0/1:18,0:18:99:154,0,165	0/1:21,0:21:77.25:77,0,230	1/1:28,0:27:13.86:152,14,0	0/1:9,1:10:28.37:61,0,28	0/0:19,0:18:4.89:0,5,15	0/1:13,1:14:57.23:97,0,57	0/1:14,0:12:32.99:33,0,65	0/1:17,0:17:3:25,0,3	0/0:27,0:24:2.04:0,2,6	0/0:13,0:13:4.35:0,4,20	0/1:14,1:15:1.08:71,0,1	0/1:22,0:22:31.66:32,0,41	0/1:16,0:16:16.72:65,0,17	0/1:21,0:21:69.72:91,0,70	1/1:18,0:18:9.77:110,10,0	0/0:4,0:3:0.06:0,0,13
chr10	23428243	.	GTGTT	G	665.40	PASS	AB=1.000;AC=25;AF=0.446;AN=56;BaseQRankSum=4.714;DP=611;FS=0.000;HRun=0;HaplotypeScore=131.7383;InbreedingCoeff=0.1662;MQ=59.34;MQ0=27;MQRankSum=-1.820;QD=2.30;ReadPosRankSum=0.428;VQSLOD=2.3167;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:2.22:0,2,16	1/1:9,0:9:11.94:102,12,0	0/0:68,0:20:56.72:0,57,832	0/0:62,0:21:52.16:0,52,788	0/1:10,0:10:22.92:47,0,23	0/1:21,0:21:10.77:18,0,11	1/1:24,1:25:5.57:33,6,0	0/0:36,0:34:75.58:0,76,1098	1/1:5,13:18:5.89:37,6,0	1/1:15,0:15:35.34:212,35,0	0/1:19,0:18:22.85:53,0,23	0/1:15,0:15:37.39:37,0,84	0/1:17,0:17:46.63:47,0,220	0/1:18,0:18:25.82:26,0,255	1/1:24,0:23:5.33:71,5,0	1/1:12,0:12:0.33:1,0,0	0/0:17,0:16:0.91:0,1,71	0/1:12,0:12:11.82:21,0,12	0/0:17,0:15:25.96:0,26,276	0/0:19,0:19:0.97:0,1,130	0/0:25,0:24:6.22:0,6,84	0/1:14,0:14:1.71:2,0,10	0/1:17,0:17:6.11:64,0,6	1/1:25,2:27:2.48:32,2,0	1/1:16,0:16:5.57:30,6,0	0/0:22,0:22:37.29:0,37,796	0/0:22,0:22:66.05:0,66,1023	0/0:4,0:3:6.02:0,6,112
chr10	23428245	.	GTT	G	2752.07	PASS	AB=0.974;AC=32;AF=0.571;AN=56;BaseQRankSum=1.362;DP=599;FS=19.412;HRun=3;HaplotypeScore=105.7981;InbreedingCoeff=0.5723;MQ=60.03;MQ0=27;MQRankSum=-0.760;QD=8.74;ReadPosRankSum=-0.215;VQSLOD=-0.6690;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,25:28:14.93:174,15,0	1/1:7,2:9:8.92:147,9,0	0/0:68,0:20:46.24:0,46,683	0/0:62,0:21:46.08:0,46,618	1/1:3,7:10:17.84:160,18,0	1/1:2,19:21:20.80:260,21,0	1/1:4,20:24:6.13:158,6,0	0/0:36,1:35:0.95:0,1,743	1/1:16,1:17:11.72:92,12,0	1/1:1,14:15:36.81:477,37,0	1/1:1,16:16:29.62:282,30,0	0/1:13,0:13:26.24:122,0,26	0/1:16,0:16:81.13:98,0,81	0/1:15,1:16:85.52:89,0,86	1/1:5,18:22:17.77:178,18,0	1/1:3,9:12:10.58:111,11,0	0/0:16,0:15:15.85:0,16,99	0/0:12,0:12:1.71:0,2,39	0/0:17,0:15:35.06:0,35,317	0/0:19,0:19:26.77:0,27,175	0/0:27,0:26:19.95:0,20,149	1/1:2,12:14:14.56:170,15,0	1/1:1,16:17:9.90:107,10,0	1/1:2,24:26:12.77:152,13,0	1/1:0,15:15:12.03:150,12,0	0/1:21,1:22:27.55:28,0,525	0/0:23,0:23:68.93:0,69,715	0/0:3,0:2:6.02:0,6,71
chr10	23429500	.	C	CTT	5322.63	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-2.491;DP=628;FS=4.429;HRun=0;HaplotypeScore=73.9631;InbreedingCoeff=0.9850;MQ=85.89;MQ0=0;MQRankSum=-4.147;QD=54.31;ReadPosRankSum=0.431;VQSLOD=5.1197;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:7:21.07:0,21,329	0/0:8,0:8:24.08:0,24,391	0/0:18,0:18:48.15:0,48,734	0/0:24,0:24:66.13:0,66,910	0/0:36,0:36:99:0,102,1589	0/0:32,0:32:96.30:0,96,1511	0/0:20,0:20:60.20:0,60,976	0/0:27,0:27:81.28:0,81,1320	0/0:23,0:23:69.22:0,69,1097	0/0:32,0:32:96.32:0,96,1544	0/0:26,0:26:78.27:0,78,1269	0/0:17,0:17:51.17:0,51,825	0/0:37,0:37:99:0,108,1712	0/0:16,0:16:45.14:0,45,709	0/0:36,0:36:99:0,108,1761	0/0:26,0:26:78.27:0,78,1272	1/1:0,19:19:54.19:1096,54,0	1/1:1,11:12:30.10:603,30,0	1/1:2,15:18:54.15:1003,54,0	1/1:0,24:24:69.24:1401,69,0	1/1:0,24:25:60.21:1219,60,0	0/0:19,0:19:57.19:0,57,927	0/0:21,0:21:63.20:0,63,1002	0/0:11,0:11:33.11:0,33,538	0/0:29,0:29:87.25:0,87,1343	0/0:30,0:30:90.29:0,90,1423	0/0:32,0:32:96.29:0,96,1501	0/0:3,0:3:9.03:0,9,147
chr10	23429647	.	T	TA	63.53	PASS	AB=0.784;AC=2;AF=0.036;AN=56;BaseQRankSum=5.258;DP=558;FS=22.457;HRun=0;HaplotypeScore=53.2683;InbreedingCoeff=-0.0105;MQ=75.36;MQ0=0;MQRankSum=5.365;QD=2.76;ReadPosRankSum=-2.003;VQSLOD=0.1112;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:27.09:0,27,377	0/0:10,0:10:30.09:0,30,404	0/1:5,4:8:51.87:67,0,52	0/1:12,1:14:15.47:85,0,15	0/0:30,0:30:81.27:0,81,1132	0/0:22,0:22:63.20:0,63,865	0/0:20,0:20:60.20:0,60,839	0/0:25,0:25:75.19:0,75,984	0/0:27,0:27:78.24:0,78,1053	0/0:23,0:23:69.23:0,69,952	0/0:23,0:23:66.21:0,66,906	0/0:22,0:22:66.21:0,66,901	0/0:31,0:31:93.25:0,93,1260	0/0:12,0:12:36.10:0,36,471	0/0:25,0:25:75.24:0,75,1032	0/0:25,0:25:72.23:0,72,987	0/0:14,0:14:37.37:0,37,506	0/0:17,0:17:48.16:0,48,661	0/0:22,0:22:66.21:0,66,907	0/0:35,0:35:99:0,105,1451	0/0:10,0:10:30.10:0,30,415	0/0:15,0:15:45.15:0,45,629	0/0:32,0:32:96.30:0,96,1309	0/0:9,0:9:27.09:0,27,378	0/0:17,0:17:51.17:0,51,713	0/0:23,0:23:69.23:0,69,963	0/0:29,0:28:87.27:0,87,1178	0/0:5,0:5:15.05:0,15,210
chr10	23429755	.	G	GTAC	27701.65	PASS	AB=1.000;AC=53;AF=0.946;AN=56;BaseQRankSum=-3.801;DP=627;FS=7.058;HRun=0;HaplotypeScore=73.5072;InbreedingCoeff=0.4963;MQ=67.44;MQ0=0;MQRankSum=-3.798;QD=44.61;ReadPosRankSum=2.800;VQSLOD=6.4971;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,11:14:18.06:386,18,0	1/1:0,12:13:27.56:571,28,0	0/1:6,0:6:13.68:14,0,29	0/0:5,0:6:3.87:0,4,104	1/1:6,42:49:99:1978,99,0	1/1:3,27:30:51.12:1038,51,0	1/1:2,23:25:57.20:1221,57,0	1/1:12,24:38:72.15:1364,72,0	1/1:3,15:20:42.14:894,42,0	1/1:6,24:30:75.24:1546,75,0	1/1:4,31:36:96.33:2021,96,0	1/1:1,24:25:66.23:1415,66,0	1/1:3,14:17:33.01:708,33,0	1/1:4,15:21:33.11:695,33,0	1/1:0,12:12:30.10:638,30,0	1/1:1,26:28:63.22:1351,63,0	1/1:1,9:10:21.07:450,21,0	1/1:1,7:8:12.04:257,12,0	1/1:5,18:25:60.19:1175,60,0	1/1:4,33:37:84.29:1801,84,0	1/1:0,12:12:21.07:451,21,0	1/1:1,23:25:54.19:1139,54,0	1/1:2,32:37:81:1729,81,0	1/1:1,15:16:36.12:772,36,0	1/1:2,28:31:72.25:1524,72,0	1/1:0,17:18:54.17:1086,54,0	1/1:5,28:33:63.05:1298,63,0	1/1:5,0:5:14.99:179,15,0
chr10	23438294	.	TTGTG	T	536.93	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=-2.576;DP=570;FS=7.492;HRun=0;HaplotypeScore=124.6203;InbreedingCoeff=0.4744;MQ=53.07;MQ0=20;MQRankSum=4.467;QD=8.01;ReadPosRankSum=2.787;VQSLOD=1.8462;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:24:6:0,6,76	0/0:5,0:5:3.01:0,3,42	0/0:34,0:19:0:0,0,0	0/0:31,0:20:3.01:0,3,63	0/1:21,0:19:0:0,0,0	0/0:26,0:23:8.99:0,9,121	0/0:15,0:15:18.06:0,18,351	0/0:34,0:30:41.18:0,41,599	0/0:14,0:12:3.01:0,3,52	0/0:19,0:17:24.03:0,24,371	0/0:11,0:9:3.01:0,3,51	0/0:25,0:24:12.04:0,12,205	0/0:21,0:19:15.05:0,15,279	0/0:24,0:23:15.04:0,15,250	1/1:12,10:23:35.33:506,35,0	1/1:16,7:22:9.03:141,9,0	0/0:23,0:24:19.12:0,19,292	0/0:14,0:12:17.99:0,18,282	0/0:16,0:13:24.08:0,24,468	0/0:22,0:22:36.07:0,36,600	0/0:30,0:27:5.95:0,6,92	0/0:10,0:9:5.95:0,6,104	0/0:18,0:17:8.97:0,9,154	0/0:14,0:11:3:0,3,65	0/0:21,0:21:6.01:0,6,77	0/0:22,0:21:33.04:0,33,571	0/0:22,0:21:21.05:0,21,376	0/0:6,0:6:3.01:0,3,32
chr10	23441527	.	C	CA	4002.73	PASS	AB=0.632;AC=11;AF=0.196;AN=56;BaseQRankSum=-8.538;DP=666;FS=0.743;HRun=8;HaplotypeScore=63.7634;InbreedingCoeff=0.9231;MQ=81.79;MQ0=0;MQRankSum=-1.352;QD=25.66;ReadPosRankSum=0.937;VQSLOD=4.4051;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,2:27:59.99:344,60,0	0/0:16,0:16:42.02:0,42,384	0/0:24,0:24:36.46:0,36,407	0/0:19,0:18:37.20:0,37,288	0/0:36,0:36:99:0,99,900	0/0:28,0:28:72.02:0,72,654	0/0:14,0:14:39.02:0,39,357	0/0:32,0:32:87.02:0,87,793	0/0:26,0:26:72.02:0,72,654	0/0:38,0:38:99:0,105,958	0/0:21,0:21:47.84:0,48,420	0/0:20,0:20:54.02:0,54,494	0/0:33,0:33:89.99:0,90,812	0/0:27,0:27:74.96:0,75,668	1/1:0,28:28:78.23:900,78,0	1/1:1,23:24:57.17:658,57,0	0/0:19,0:19:48:0,48,435	0/0:7,0:7:21.01:0,21,192	0/0:22,0:23:62.03:0,62,544	0/0:20,0:20:45.01:0,45,412	0/0:19,0:19:54.03:0,54,494	0/0:18,0:18:48.02:0,48,439	0/0:24,0:24:66.02:0,66,599	0/0:18,0:18:48.01:0,48,434	0/0:28,0:28:80.72:0,81,724	1/1:2,34:36:99:1156,102,0	1/1:3,26:29:63.19:727,63,0	0/1:5,7:12:3.39:218,0,3
chr10	23442655	.	T	TACACATA	7797.48	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=12.482;DP=732;FS=6.441;HRun=0;HaplotypeScore=178.3144;InbreedingCoeff=0.9949;MQ=63.67;MQ0=1;MQRankSum=-12.245;QD=95.09;ReadPosRankSum=3.704;VQSLOD=5.5104;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,116,3589	0/0:12,0:12:33.11:0,33,923	0/0:12,0:10:17.13:0,17,511	0/0:15,0:14:21.54:0,22,501	0/0:36,0:36:90.31:0,90,2461	0/0:32,0:32:81.26:0,81,2201	0/0:35,0:35:99:0,99,2639	0/0:32,0:32:90.31:0,90,2387	0/0:27,0:27:69.24:0,69,1871	0/0:28,0:28:84.29:0,84,2314	0/0:34,0:34:99:0,102,2784	0/0:24,0:24:69.24:0,69,1928	0/0:30,0:30:72.09:0,72,1880	0/0:34,0:34:96.33:0,96,2612	1/1:1,15:16:48.16:1684,48,0	1/1:1,19:21:63.22:2190,63,0	0/0:28,0:28:78.27:0,78,2164	0/0:26,0:26:72.25:0,72,1977	0/0:13,0:13:39.13:0,39,1018	0/0:33,0:33:99:0,99,2706	0/0:38,0:38:99:0,105,2770	0/0:20,0:20:45.15:0,45,1257	0/0:37,0:37:99:0,105,2847	0/0:27,0:27:78.24:0,78,2060	0/0:30,0:30:84.29:0,84,2311	1/1:2,19:19:54.19:1863,54,0	1/1:2,14:16:44.98:1420,45,0	1/1:1,7:7:18.06:640,18,0
chr10	23442657	.	TA	T	1453.19	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=14.356;DP=737;FS=9.320;HRun=1;HaplotypeScore=109.8729;InbreedingCoeff=0.9928;MQ=63.62;MQ0=1;MQRankSum=-12.487;QD=17.94;ReadPosRankSum=2.675;VQSLOD=3.3436;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,116,2083	0/0:13,0:13:33.11:0,33,528	0/0:12,0:11:15.47:0,15,303	0/0:16,0:15:18.09:0,18,452	0/0:38,0:38:90.31:0,90,1436	0/0:31,0:31:78.27:0,78,1244	0/0:34,0:34:96.31:0,96,1512	0/0:33,0:33:99:0,99,1478	0/0:25,0:25:69.24:0,69,1103	0/0:31,0:31:93.29:0,93,1420	0/0:36,0:36:99:0,108,1689	0/0:24,0:24:69.24:0,69,1101	0/0:29,0:29:69.23:0,69,1103	0/0:35,0:35:96.31:0,96,1510	1/1:1,15:16:47.28:333,47,0	1/1:2,20:22:65.38:469,65,0	0/0:28,0:28:78.27:0,78,1241	0/0:27,0:27:72.25:0,72,1150	0/0:13,0:13:39.12:0,39,602	0/0:34,0:34:99:0,102,1629	0/0:36,0:36:99:0,105,1651	0/0:21,0:21:48.16:0,48,765	0/0:36,0:36:99:0,102,1622	0/0:25,0:25:72.25:0,72,1148	0/0:30,0:30:87.29:0,87,1367	1/1:1,19:18:49.70:391,50,0	1/1:2,14:16:40.06:297,40,0	1/1:0,7:6:17.92:138,18,0
chr10	23443137	.	AGT	A	2051.83	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.212;DP=663;FS=5.273;HRun=0;HaplotypeScore=78.7636;InbreedingCoeff=0.9781;MQ=69.13;MQ0=1;MQRankSum=-1.589;QD=37.31;ReadPosRankSum=2.820;VQSLOD=5.9665;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,138,2454	0/0:8,0:8:24.08:0,24,449	0/0:18,0:16:42.14:0,42,751	0/0:16,0:15:41.13:0,41,653	0/0:27,0:27:78.27:0,78,1460	0/0:27,0:27:75.24:0,75,1343	0/0:13,0:13:39.08:0,39,590	0/0:27,0:27:81.26:0,81,1452	0/0:22,0:22:63.22:0,63,1178	0/0:31,0:31:84.27:0,84,1496	0/0:21,0:21:60.21:0,60,1123	0/0:19,0:19:51.17:0,51,945	0/0:36,0:36:99:0,108,2022	0/0:23,0:23:66.21:0,66,1204	0/0:27,0:27:81.28:0,81,1516	0/0:24,0:24:69.21:0,69,1222	0/0:23,0:23:69.24:0,69,1292	0/0:24,0:24:66.21:0,66,1191	0/0:17,0:17:48.16:0,48,899	0/0:21,0:21:63.22:0,63,1179	0/0:45,0:45:99:0,132,2398	0/0:32,0:32:90.31:0,90,1685	0/0:25,0:25:62.87:0,63,1143	0/0:20,0:20:60.21:0,60,1111	0/0:14,0:14:39.13:0,39,730	1/1:2,24:25:69.22:997,69,0	1/1:1,25:26:72.24:1060,72,0	1/1:0,3:3:9.03:132,9,0
chr10	23444321	.	T	TTCTC	6857.72	PASS	AB=0.733;AC=40;AF=0.769;AN=52;BaseQRankSum=-2.343;DP=734;FS=1.761;HRun=0;HaplotypeScore=144.7375;InbreedingCoeff=0.1320;MQ=69.47;MQ0=10;MQRankSum=-0.726;QD=11.11;ReadPosRankSum=0.863;VQSLOD=4.3271;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:27,1:28:10.92:147,11,0	1/1:6,3:14:20.27:284,20,0	./.	./.	0/1:17,6:30:13.53:152,0,14	0/1:14,7:23:76.50:149,0,76	1/1:9,7:17:11.91:228,12,0	0/1:49,0:49:29:57,0,29	1/1:22,11:33:20.81:438,21,0	0/0:37,0:40:42.12:0,42,585	0/0:22,0:21:30.08:0,30,406	1/1:14,1:16:11.78:214,12,0	0/1:11,16:33:19.77:521,0,20	1/1:5,11:20:27.09:640,27,0	1/1:10,11:27:23.29:375,23,0	0/1:9,10:23:4.11:413,0,4	0/1:13,12:29:1.28:541,0,1	1/1:8,3:13:11.77:189,12,0	1/1:14,3:18:20.77:324,21,0	1/1:17,3:24:5.75:83,6,0	0/1:12,3:17:29.29:245,0,29	1/1:13,12:25:11.45:284,11,0	1/1:12,8:27:15.65:184,16,0	1/1:9,1:18:11.42:147,11,0	1/1:14,0:29:9.03:150,9,0	1/1:22,10:36:44.83:655,45,0	1/1:25,11:43:20.39:322,20,0	0/1:11,1:15:38:114,0,38
chr10	23445716	.	CT	C	50.17	PASS	AB=0.667;AC=1;AF=0.018;AN=56;BaseQRankSum=3.226;DP=610;FS=0.000;HRun=3;HaplotypeScore=62.2640;InbreedingCoeff=-0.0203;MQ=88.61;MQ0=0;MQRankSum=-1.546;QD=6.27;ReadPosRankSum=-0.403;VQSLOD=0.0557;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:96.32:0,96,1382	0/0:13,0:13:39.13:0,39,561	0/0:27,0:27:75.21:0,75,1002	0/0:19,0:19:52.89:0,53,656	0/0:35,0:35:99:0,105,1511	0/0:16,0:16:42.14:0,42,605	0/0:19,0:19:54.17:0,54,760	0/0:24,0:24:60.19:0,60,849	0/0:16,0:16:48.16:0,48,690	0/0:28,0:28:84.27:0,84,1179	0/0:21,0:21:63.21:0,63,901	0/0:17,0:17:48.16:0,48,691	0/0:20,0:20:60.17:0,60,812	0/0:20,0:20:57.18:0,57,804	0/0:20,0:20:60.20:0,60,864	0/0:14,0:14:42.14:0,42,604	0/0:26,0:26:78.25:0,78,1106	0/0:3,0:3:9.03:0,9,130	0/0:14,0:14:39.11:0,39,528	0/0:41,0:41:99:0,120,1712	0/0:24,0:24:63.19:0,63,888	0/0:22,0:22:66.20:0,66,914	0/0:26,0:26:78.24:0,78,1087	0/0:26,0:26:72.24:0,72,1037	0/0:15,0:15:39.13:0,39,562	0/0:31,0:31:90.30:0,90,1296	0/0:33,0:33:99:0,99,1387	0/1:4,4:8:99:125,0,149
chr10	23446545	.	AAGG	A	229.77	PASS	AB=0.607;AC=1;AF=0.018;AN=56;BaseQRankSum=4.797;DP=712;FS=14.247;HRun=0;HaplotypeScore=117.5125;InbreedingCoeff=-0.0160;MQ=65.19;MQ0=5;MQRankSum=-2.614;QD=13.52;ReadPosRankSum=-2.504;VQSLOD=2.1778;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:6,11:17:29.16:304,0,29	0/0:8,0:8:21.07:0,21,438	0/0:40,0:22:26.20:0,26,479	0/0:30,0:21:32.92:0,33,727	0/0:28,0:28:78.25:0,78,1581	0/0:30,0:30:84.25:0,84,1628	0/0:25,0:25:72.25:0,72,1495	0/0:20,0:20:57.19:0,57,1146	0/0:25,0:25:63.18:0,63,1179	0/0:35,0:35:81.27:0,81,1622	0/0:23,0:23:63.20:0,63,1273	0/0:20,0:20:60.21:0,60,1254	0/0:27,0:27:78.25:0,78,1615	0/0:34,0:34:78.25:0,78,1591	0/0:30,0:30:84.29:0,84,1742	0/0:34,0:34:81.28:0,81,1693	0/0:24,0:23:57.20:0,57,1199	0/0:11,0:11:33.09:0,33,659	0/0:14,0:14:30.09:0,30,568	0/0:27,0:27:66.23:0,66,1382	0/0:18,0:18:51.15:0,51,1016	0/0:28,0:28:72.20:0,72,1371	0/0:25,0:25:63.22:0,63,1322	0/0:29,0:28:72.25:0,72,1526	0/0:27,0:27:75.24:0,75,1551	0/0:37,0:37:96.32:0,96,1956	0/0:28,0:27:69.21:0,69,1391	0/0:18,0:18:42.14:0,42,890
chr10	23447155	.	TC	T	3685.25	PASS	AB=0.950;AC=14;AF=0.250;AN=56;BaseQRankSum=16.934;DP=643;FS=12.474;HRun=9;HaplotypeScore=111.2336;InbreedingCoeff=0.8570;MQ=75.57;MQ0=0;MQRankSum=-7.549;QD=18.90;ReadPosRankSum=3.660;VQSLOD=2.7189;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,37:42:93.02:850,93,0	0/0:11,0:11:27.94:0,28,295	0/0:21,1:23:43.80:0,44,411	0/0:22,0:23:29.21:0,29,307	0/0:17,0:17:48.13:0,48,544	0/0:27,0:27:78.23:0,78,900	0/0:18,0:18:42.12:0,42,485	0/0:30,0:30:60.13:0,60,655	0/0:30,0:30:70.09:0,70,797	0/0:28,0:28:75.22:0,75,857	0/1:10,0:10:0.31:0,0,241	0/0:26,0:26:60.10:0,60,649	0/0:29,0:29:75.20:0,75,851	0/0:26,0:26:66.18:0,66,750	1/1:5,27:32:78:713,78,0	1/1:4,28:32:81.02:740,81,0	0/0:20,0:20:48.14:0,48,553	0/0:10,0:10:30.09:0,30,346	0/0:18,0:18:39.05:0,39,433	0/0:20,0:20:45.11:0,45,499	0/0:36,0:36:93.28:0,93,1073	0/0:17,0:17:51.13:0,51,576	0/1:16,2:18:9.75:10,0,387	0/0:16,0:16:42.12:0,42,484	0/0:23,0:23:60.17:0,60,684	1/1:2,19:21:57.03:521,57,0	1/1:1,26:27:78.04:713,78,0	1/1:8,5:13:14.97:137,15,0
chr10	23447362	.	G	GA	4927.32	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=15.638;DP=605;FS=4.817;HRun=1;HaplotypeScore=85.0295;InbreedingCoeff=0.9929;MQ=88.92;MQ0=0;MQRankSum=-13.053;QD=37.90;ReadPosRankSum=0.410;VQSLOD=5.2699;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,17:19:51.05:687,51,0	0/0:14,0:14:39.13:0,39,506	0/0:30,0:30:81.25:0,81,1035	0/0:21,0:21:51.16:0,51,654	0/0:28,0:28:75.24:0,75,974	0/0:23,0:23:69.21:0,69,881	0/0:25,0:25:75.24:0,75,973	0/0:28,0:28:78.25:0,78,1012	0/0:26,0:26:75.24:0,75,971	0/0:19,0:19:54.18:0,54,701	0/0:11,0:11:30.10:0,30,390	0/0:17,0:17:48.16:0,48,623	0/0:25,0:25:69.22:0,69,895	0/0:30,0:30:87.27:0,87,1114	1/1:5,29:34:87.28:1265,87,0	1/1:4,20:24:66.21:963,66,0	0/0:17,0:17:51.17:0,51,662	0/0:14,0:14:42.14:0,42,545	0/0:18,0:18:51.14:0,51,639	0/0:21,0:21:60.20:0,60,779	0/0:35,0:35:99:0,102,1324	0/0:15,0:15:39.11:0,39,490	0/0:15,0:15:45.15:0,45,584	0/0:27,0:27:81.26:0,81,1052	0/0:16,0:16:39.11:0,39,490	1/1:5,14:19:12.16:647,12,0	1/1:1,26:27:72.20:1051,72,0	1/1:0,7:7:21.07:314,21,0
chr10	23447380	.	T	TG	4681.98	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=11.992;DP=616;FS=6.855;HRun=2;HaplotypeScore=78.6024;InbreedingCoeff=0.9989;MQ=85.84;MQ0=0;MQRankSum=-12.119;QD=36.02;ReadPosRankSum=-0.350;VQSLOD=5.0066;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,17:18:47.92:612,48,0	0/0:12,0:12:33.10:0,33,409	0/0:27,0:27:69.20:0,69,831	0/0:20,0:20:55.89:0,56,604	0/0:28,0:28:81.22:0,81,977	0/0:31,0:31:93.29:0,93,1153	0/0:27,0:27:78.23:0,78,954	0/0:34,0:34:87.26:0,87,1059	0/0:29,0:29:86.07:0,86,1032	0/0:19,0:19:54.16:0,54,659	0/0:17,0:17:51.11:0,51,596	0/0:19,0:19:54.10:0,54,638	0/0:26,0:26:75.24:0,75,929	0/0:30,0:30:90.14:0,90,1081	1/1:6,26:32:84.11:1106,84,0	1/1:4,22:26:72.13:986,72,0	0/0:16,0:16:48.15:0,48,595	0/0:12,0:12:33.10:0,33,409	0/0:14,0:14:36.10:0,36,436	0/0:20,0:20:60.18:0,60,731	0/0:27,0:27:75.20:0,75,904	0/0:17,0:17:48.15:0,48,595	0/0:17,0:17:48.14:0,48,582	0/0:30,0:29:90.21:0,90,1063	0/0:14,0:14:42.11:0,42,506	1/1:3,20:23:31.95:850,32,0	1/1:3,21:24:66.12:900,66,0	1/1:0,7:7:20.89:228,21,0
chr10	23447809	.	CA	C	3704.61	PASS	AB=0.686;AC=43;AF=0.768;AN=56;BaseQRankSum=0.674;DP=487;FS=3.528;HRun=14;HaplotypeScore=57.0961;InbreedingCoeff=0.3897;MQ=51.44;MQ0=25;MQRankSum=2.567;QD=8.50;ReadPosRankSum=1.037;VQSLOD=2.7509;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,1:19:25.76:0,26,313	1/1:2,3:5:8.91:62,9,0	0/0:7,0:3:2.98:0,3,22	0/0:5,0:3:7.77:0,8,42	1/1:8,16:24:20.78:271,21,0	1/1:4,23:25:36.38:350,36,0	1/1:4,7:12:13.88:88,14,0	1/1:16,19:36:5.94:317,6,0	1/1:7,11:17:17.75:123,18,0	1/1:7,9:16:27.78:176,28,0	1/1:5,17:23:52.56:355,53,0	1/1:5,4:7:5.90:40,6,0	0/1:2,11:14:5.01:105,0,5	0/1:9,8:16:38.19:64,0,38	0/1:17,1:17:4.78:5,0,230	0/0:16,1:17:10.19:0,10,278	0/1:15,16:31:12.26:209,0,12	0/1:7,12:19:23.89:138,0,24	1/1:14,9:22:11.78:207,12,0	1/1:4,7:11:20.80:144,21,0	1/1:4,4:7:8.91:62,9,0	1/1:5,11:15:7.86:198,8,0	1/1:3,11:14:6.94:183,7,0	1/1:3,5:14:24.65:131,25,0	1/1:8,12:20:35.56:246,36,0	1/1:6,0:21:35.54:114,36,0	1/1:6,2:19:30.36:112,30,0	1/1:6,0:3:0.95:4,1,0
chr10	23447977	.	T	TA	292.59	PASS	AB=0.871;AC=3;AF=0.054;AN=56;BaseQRankSum=7.885;DP=671;FS=0.000;HRun=0;HaplotypeScore=115.9133;InbreedingCoeff=-0.0564;MQ=65.41;MQ0=2;MQRankSum=-7.241;QD=2.99;ReadPosRankSum=-3.801;VQSLOD=2.2684;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:66.22:0,66,915	0/0:7,0:7:21.07:0,21,294	0/0:16,0:10:23.75:0,24,301	0/0:26,0:22:47.49:0,47,634	0/0:28,0:28:81.27:0,81,1132	0/0:35,0:35:99:0,99,1383	0/0:22,0:22:63.17:0,63,859	0/0:52,0:52:99:0,144,1924	0/0:19,0:19:54.18:0,54,755	0/0:30,0:30:90.30:0,90,1259	0/0:26,0:26:78.26:0,78,1090	0/0:13,0:13:39.13:0,39,546	0/0:21,0:21:60.18:0,60,809	0/0:16,0:16:44.96:0,45,629	0/1:16,7:23:99:212,0,502	0/1:32,7:38:99:163,0,1205	0/0:33,0:34:99:0,101,1370	0/0:21,0:21:62.22:0,62,828	0/0:16,0:16:48.15:0,48,655	0/0:32,0:32:96.31:0,96,1327	0/0:13,0:13:36.11:0,36,487	0/0:15,0:15:42.14:0,42,588	0/0:27,0:27:81.27:0,81,1132	0/0:22,0:22:60.16:0,60,817	0/0:13,0:13:39.12:0,39,529	0/0:33,0:32:59.23:0,59,1190	0/1:36,0:36:15.76:16,0,973	0/0:10,0:10:30.10:0,30,419
chr10	23448031	.	GTCTT	G	1000.16	PASS	AB=0.649;AC=2;AF=0.036;AN=56;BaseQRankSum=7.187;DP=677;FS=3.184;HRun=0;HaplotypeScore=174.6765;InbreedingCoeff=-0.0478;MQ=57.47;MQ0=4;MQRankSum=-5.764;QD=14.29;ReadPosRankSum=1.797;VQSLOD=3.5920;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:23.61:0,24,203	0/0:8,0:8:24.08:0,24,567	0/0:19,0:11:0.40:0,0,234	0/0:22,0:12:12.11:0,12,327	0/0:30,0:30:66.16:0,66,1310	0/0:30,0:30:66.17:0,66,1378	0/0:24,0:24:63.06:0,63,1185	0/0:43,0:43:67.22:0,67,1393	0/0:22,0:22:36.06:0,36,699	0/0:29,0:29:69.23:0,69,1585	0/0:22,0:22:36.09:0,36,832	0/0:16,0:16:30.08:0,30,618	0/0:27,0:27:60.18:0,60,1309	0/0:14,0:14:33.10:0,33,718	0/1:9,20:29:99:521,0,128	0/1:24,17:40:99:567,0,471	0/0:41,0:41:97.25:0,97,1781	0/0:21,0:21:13.19:0,13,546	0/0:20,0:20:37.33:0,37,679	0/0:29,0:29:81.17:0,81,1756	0/0:13,0:13:33.10:0,33,740	0/0:14,0:14:27.04:0,27,513	0/0:20,0:20:45.10:0,45,841	0/0:23,0:23:49.68:0,50,998	0/0:12,0:12:27.08:0,27,549	0/0:40,0:40:87.09:0,87,1160	0/0:40,0:39:86.27:0,86,1164	0/0:7,0:7:0.22:0,0,15
chr10	23450013	.	T	TA	2171.83	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-9.364;DP=637;FS=4.697;HRun=5;HaplotypeScore=57.3237;InbreedingCoeff=0.9963;MQ=78.58;MQ0=0;MQRankSum=-2.378;QD=35.03;ReadPosRankSum=-0.159;VQSLOD=3.7897;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:93.23:0,93,999	0/0:12,0:12:33.08:0,33,355	0/0:20,0:20:48.09:0,48,498	0/0:8,0:8:18.03:0,18,185	0/0:50,0:50:99:0,147,1573	0/0:24,0:24:66.16:0,66,709	0/0:10,0:10:30.08:0,30,322	0/0:30,0:30:81.18:0,81,855	0/0:15,0:15:36.09:0,36,387	0/0:31,0:31:81.20:0,81,870	0/0:29,0:29:81.20:0,81,870	0/0:15,0:15:36.09:0,36,386	0/0:26,0:26:75.13:0,75,779	0/0:31,0:31:90.19:0,90,950	0/0:25,0:25:72.17:0,72,766	0/0:20,0:20:57.14:0,57,613	0/0:16,0:16:45.11:0,45,478	0/0:17,0:17:42.10:0,42,451	0/0:13,0:13:39.10:0,39,419	0/0:29,0:29:78.16:0,78,826	0/0:16,0:16:45.11:0,45,484	0/0:31,0:31:93.19:0,93,975	0/0:23,0:23:69.15:0,69,733	0/0:10,0:10:27.07:0,27,290	0/0:41,0:41:99:0,114,1225	1/1:0,18:18:54.17:696,54,0	1/1:1,28:29:78.25:1026,78,0	1/1:0,15:15:45.15:592,45,0
chr10	23451074	.	A	AT	2183.90	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-11.488;DP=681;FS=1.001;HRun=7;HaplotypeScore=61.5465;InbreedingCoeff=0.9860;MQ=79.11;MQ0=0;MQRankSum=-1.217;QD=26.96;ReadPosRankSum=2.502;VQSLOD=4.4180;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,20:22:54.17:652,54,0	0/0:10,0:10:30.03:0,30,284	0/0:22,0:22:48.06:0,48,457	0/0:11,0:11:11.02:0,11,154	0/0:39,0:39:99:0,111,1072	0/0:43,0:43:99:0,120,1153	0/0:23,0:23:63.10:0,63,608	0/0:27,0:27:69.10:0,69,666	0/0:22,0:22:66.11:0,66,637	0/0:30,0:30:77.24:0,77,751	0/0:29,0:29:78.08:0,78,740	0/0:15,0:15:42.05:0,42,399	0/0:21,0:21:60.08:0,60,574	0/0:22,0:22:63.10:0,63,608	1/1:5,25:30:75.23:906,75,0	1/1:6,23:29:40.23:768,40,0	0/0:24,0:24:54.08:0,54,521	0/0:17,0:17:48.08:0,48,463	0/0:22,0:22:60.10:0,60,579	0/0:36,0:36:99:0,105,1014	0/0:13,0:13:36.05:0,36,347	0/0:35,0:35:90.14:0,90,869	0/0:26,0:26:69.10:0,69,666	0/0:10,0:10:30.05:0,30,290	0/0:35,0:35:93.12:0,93,890	0/0:17,0:17:48.07:0,48,463	0/0:33,0:33:87.08:0,87,825	0/0:18,0:18:45.07:0,45,435
chr10	23451516	.	T	TA	1635.70	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=9.315;DP=551;FS=11.974;HRun=8;HaplotypeScore=59.4639;InbreedingCoeff=0.9746;MQ=75.07;MQ0=0;MQRankSum=-1.539;QD=17.78;ReadPosRankSum=0.026;VQSLOD=2.2524;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,19:20:51.15:589,51,0	0/0:5,0:5:9:0,9,82	0/0:13,0:13:23.89:0,24,201	0/0:8,0:8:17.82:0,18,144	0/0:37,0:37:90:0,90,814	0/0:16,0:16:45.02:0,45,412	0/0:10,0:10:24.01:0,24,220	0/0:31,0:31:69.02:0,69,631	0/0:13,0:13:30.01:0,30,275	0/0:31,0:31:81.03:0,81,741	0/0:26,0:26:60.02:0,60,549	0/0:16,0:16:45.02:0,45,412	0/0:22,0:22:65.98:0,66,591	0/0:22,0:22:57:0,57,512	0/0:16,0:16:45.02:0,45,412	0/0:27,0:27:66.03:0,66,604	0/0:22,0:22:54.01:0,54,494	0/0:15,0:15:33.01:0,33,302	0/0:19,0:19:45.01:0,45,412	0/0:30,0:30:81.04:0,81,741	0/0:6,0:6:15.01:0,15,137	0/0:15,0:15:33.01:0,33,302	0/0:23,0:23:63.02:0,63,572	0/0:17,0:17:48.02:0,48,439	0/0:19,0:19:51.01:0,51,460	1/1:32,0:32:81.99:489,82,0	1/1:33,0:33:83.16:574,83,0	1/1:7,0:7:20.81:144,21,0
chr10	23451518	.	A	AC	2793.53	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-5.862;DP=541;FS=11.339;HRun=0;HaplotypeScore=52.5699;InbreedingCoeff=0.9882;MQ=74.62;MQ0=0;MQRankSum=-1.362;QD=30.70;ReadPosRankSum=1.370;VQSLOD=2.7062;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:20:17.73:119,18,0	0/0:5,0:5:15.03:0,15,177	0/0:13,0:13:33.03:0,33,394	0/0:7,0:7:20.38:0,20,236	0/0:36,0:36:99:0,105,1389	0/0:17,0:17:51.15:0,51,679	0/0:10,0:10:30.08:0,30,387	0/0:29,0:29:87.25:0,87,1129	0/0:13,0:13:39.08:0,39,493	0/0:30,0:30:90.26:0,90,1206	0/0:27,0:27:75.21:0,75,972	0/0:15,0:15:45.15:0,45,629	0/0:24,0:24:69.22:0,69,946	0/0:20,0:20:60.19:0,60,823	0/0:16,0:16:48.15:0,48,656	0/0:25,0:25:75.23:0,75,1002	0/0:23,0:23:66.09:0,66,841	0/0:14,0:14:36.09:0,36,480	0/0:18,0:18:54.16:0,54,712	0/0:28,0:28:84.27:0,84,1158	0/0:6,0:6:18.05:0,18,235	0/0:14,0:14:42.09:0,42,535	0/0:24,0:24:69.21:0,69,931	0/0:17,0:17:51.16:0,51,696	0/0:19,0:19:57.18:0,57,767	1/1:0,31:31:93.25:1300,93,0	1/1:0,33:33:84.28:1227,84,0	1/1:0,7:7:21.07:307,21,0
chr10	23454167	.	TA	T	2016.97	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=12.140;DP=658;FS=0.992;HRun=6;HaplotypeScore=71.0467;InbreedingCoeff=0.9583;MQ=87.41;MQ0=0;MQRankSum=-1.691;QD=28.41;ReadPosRankSum=2.247;VQSLOD=4.3911;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:48.16:0,48,632	0/0:6,0:6:18.06:0,18,236	0/0:30,0:30:69.21:0,69,871	0/0:19,0:19:48.08:0,48,574	0/0:28,0:28:81.26:0,81,1065	0/0:28,0:28:75.24:0,75,987	0/0:10,0:10:30.10:0,30,394	0/0:41,0:41:99:0,111,1435	0/0:15,0:15:39.12:0,39,500	0/0:28,0:28:78.25:0,78,1024	0/0:25,0:25:75.21:0,75,956	0/0:24,0:24:69.22:0,69,906	0/0:28,0:28:81.26:0,81,1066	0/0:20,0:20:57.17:0,57,734	0/0:28,0:28:81.26:0,81,1066	0/0:32,0:32:96.30:0,96,1250	0/0:24,0:24:57.19:0,57,750	0/0:12,0:12:33.11:0,33,433	0/0:19,0:19:57.17:0,57,726	0/0:32,0:32:96.31:0,96,1260	0/0:23,0:23:66.13:0,66,829	0/0:24,0:24:69.22:0,69,908	0/0:26,0:26:66.21:0,66,868	0/0:24,0:23:66.21:0,66,868	0/0:22,0:22:57.18:0,57,738	1/1:1,28:29:84.20:894,84,0	1/1:3,37:40:99:1193,111,0	1/1:0,2:2:6.02:64,6,0
chr10	23455392	.	TACA	T	17728.57	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=7.650;DP=647;FS=2.748;HRun=0;HaplotypeScore=101.4796;InbreedingCoeff=0.9767;MQ=87.39;MQ0=0;MQRankSum=-4.772;QD=39.57;ReadPosRankSum=4.275;VQSLOD=6.1326;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:63.22:0,63,1423	1/1:0,3:3:6.02:100,6,0	0/0:21,0:21:60.13:0,60,1239	0/0:27,0:27:75.26:0,75,1626	1/1:2,21:23:57.19:921,57,0	1/1:2,31:33:75.26:1235,75,0	1/1:1,12:13:27.09:449,27,0	1/1:0,25:25:75.24:1223,75,0	1/1:1,27:29:72.25:1193,72,0	1/1:1,39:40:99:1895,117,0	1/1:1,19:20:42.14:698,42,0	1/1:0,23:23:54.18:886,54,0	1/1:1,17:18:45.15:748,45,0	1/1:1,32:33:81.28:1342,81,0	0/0:34,0:34:99:0,99,2159	0/0:29,0:29:87.26:0,87,1842	1/1:2,19:21:44.65:748,45,0	1/1:0,7:7:12.04:187,12,0	1/1:0,11:11:33.09:521,33,0	1/1:2,28:29:78.27:1298,78,0	1/1:1,27:28:54.12:866,54,0	1/1:2,22:24:54.18:886,54,0	1/1:1,20:21:48.16:798,48,0	1/1:1,29:30:66.22:1086,66,0	1/1:0,15:16:39.13:648,39,0	0/0:24,0:24:69.24:0,69,1559	0/0:35,0:34:99:0,105,2263	0/0:7,0:7:21.07:0,21,475
chr10	23455805	.	G	GAT	3574.24	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=1.768;DP=381;FS=1.823;HRun=0;HaplotypeScore=66.6890;InbreedingCoeff=0.9379;MQ=81.68;MQ0=5;MQRankSum=-6.026;QD=49.64;ReadPosRankSum=2.276;VQSLOD=4.7652;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,11:12:26.88:546,27,0	0/0:5,0:5:15.05:0,15,229	0/0:37,0:16:43.40:0,43,543	0/0:33,0:14:27.09:0,27,428	0/0:22,0:22:63.16:0,63,982	0/0:11,0:11:33.10:0,33,513	0/0:12,0:12:36.12:0,36,587	0/0:20,0:20:54.12:0,54,786	0/0:6,0:6:18.04:0,18,269	0/0:15,0:15:45.14:0,45,689	0/0:13,0:13:39.13:0,39,633	0/0:10,0:10:30.10:0,30,489	0/0:18,0:18:36.12:0,36,580	0/0:15,0:15:45.15:0,45,734	1/1:0,15:16:39.13:788,39,0	1/1:0,14:14:36.12:723,36,0	0/0:14,0:12:39.13:0,39,632	0/0:2,0:2:6.02:0,6,98	0/0:16,0:16:45.13:0,45,688	0/0:24,0:24:69.22:0,69,1097	0/0:4,0:4:9.03:0,9,147	0/0:9,0:9:27.09:0,27,438	0/0:7,0:7:21.06:0,21,318	0/0:4,0:4:9.03:0,9,147	0/0:9,0:9:27.09:0,27,440	1/1:0,11:13:39.11:728,39,0	1/1:0,13:13:30.10:606,30,0	1/1:0,4:4:9.03:182,9,0
chr10	23455966	.	G	GAC	2297.46	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=10.785;DP=545;FS=0.000;HRun=0;HaplotypeScore=80.4422;InbreedingCoeff=0.9940;MQ=86.15;MQ0=0;MQRankSum=-3.889;QD=40.31;ReadPosRankSum=1.773;VQSLOD=5.1428;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:14:36.12:0,36,509	0/0:6,0:6:18.06:0,18,258	0/0:20,0:20:57.08:0,57,745	0/0:19,0:19:53.91:0,54,718	0/0:27,0:27:78.24:0,78,1098	0/0:31,0:31:93.28:0,93,1290	0/0:20,0:20:60.20:0,60,858	0/0:38,0:38:93.31:0,93,1333	0/0:23,0:23:66.22:0,66,945	0/0:18,0:18:54.17:0,54,759	0/0:19,0:19:54.18:0,54,773	0/0:14,0:14:39.13:0,39,558	0/0:20,0:20:57.19:0,57,816	0/0:22,0:22:63.20:0,63,884	0/0:15,0:15:42.14:0,42,601	0/0:27,0:27:75.24:0,75,1056	0/0:20,0:19:54.01:0,54,743	0/0:7,0:7:19.88:0,20,262	0/0:17,0:17:51.13:0,51,689	0/0:21,0:21:60.20:0,60,859	0/0:31,0:31:87.25:0,87,1223	0/0:17,0:17:45.13:0,45,625	0/0:11,0:11:30.10:0,30,430	0/0:15,0:15:42.12:0,42,582	0/0:15,0:15:45.14:0,45,627	1/1:4,20:24:23.21:1068,23,0	1/1:5,17:22:42.14:768,42,0	1/1:0,11:11:33.11:604,33,0
chr10	23456373	.	C	CAGTCTTTAG	5490.80	PASS	AB=0.568;AC=5;AF=0.089;AN=56;BaseQRankSum=-0.608;DP=654;FS=61.010;HRun=0;HaplotypeScore=170.5609;InbreedingCoeff=0.7213;MQ=93.81;MQ0=1;MQRankSum=-9.938;QD=127.69;ReadPosRankSum=1.369;VQSLOD=2.9508;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:45.15:0,45,1422	0/0:5,0:5:15.05:0,15,474	0/0:30,0:30:87.28:0,87,2498	0/0:31,0:31:81.24:0,81,2423	0/0:30,0:30:84.21:0,84,2342	0/0:24,0:24:72.25:0,72,2190	0/0:21,0:21:63.20:0,63,1843	0/0:38,0:38:99:0,102,3046	0/0:23,0:23:69.22:0,69,2019	0/0:27,0:27:81.28:0,81,2444	0/0:38,0:38:99:0,108,3313	0/0:21,0:21:63.20:0,63,1918	0/0:32,0:32:90.31:0,90,2764	0/0:16,0:16:45.15:0,45,1356	0/0:31,0:30:87.30:0,87,2699	0/0:26,0:26:75.24:0,75,2225	0/0:17,0:17:51.16:0,51,1495	0/0:14,0:14:39.13:0,39,1230	0/0:15,0:15:45.13:0,45,1247	0/0:21,0:21:60.19:0,60,1779	0/0:35,0:35:99:0,105,3309	0/0:18,0:18:51.18:0,51,1605	0/0:28,0:28:81.28:0,81,2557	0/0:21,0:20:63.17:0,63,1779	0/0:31,0:31:93.31:0,93,2843	0/1:5,15:21:37.70:2476,0,38	1/1:7,13:20:60.21:2718,60,0	1/1:0,2:2:6.02:297,6,0
chr10	23456483	.	AATCTGTGGAT	A	1410.05	PASS	AB=0.749;AC=3;AF=0.054;AN=56;BaseQRankSum=6.725;DP=524;FS=34.001;HRun=0;HaplotypeScore=169.2999;InbreedingCoeff=-0.0087;MQ=84.86;MQ0=0;MQRankSum=-6.276;QD=28.20;ReadPosRankSum=2.387;VQSLOD=1.5224;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:63.19:0,63,3223	0/0:7,0:7:18.04:0,18,834	0/0:18,0:18:47.34:0,47,2348	0/0:18,0:18:54.16:0,54,2717	0/0:25,0:25:69.24:0,69,3592	0/0:15,0:15:45.14:0,45,2271	0/0:16,0:16:48.16:0,48,2515	0/0:34,0:34:99:0,102,4808	0/0:18,0:18:54.17:0,54,2759	0/0:21,0:21:63.22:0,63,3348	0/0:29,0:29:84.29:0,84,4369	0/0:20,0:20:57.20:0,57,3020	0/0:26,0:26:78.25:0,78,3893	0/0:15,0:15:45.15:0,45,2412	0/0:24,0:24:69.24:0,69,3373	0/0:25,0:25:69.23:0,69,3523	0/0:14,0:14:36.12:0,36,1849	0/0:18,0:18:54.16:0,54,2664	0/0:18,0:18:54.19:0,54,2794	0/0:27,0:27:81.26:0,81,4049	0/0:5,0:5:15.05:0,15,809	0/0:11,0:11:33.11:0,33,1744	0/0:17,0:17:51.16:0,51,2476	0/0:15,0:15:45.13:0,45,2214	0/0:17,0:17:51.16:0,51,2570	0/1:14,6:20:99:553,0,205	0/1:15,9:24:45.84:798,0,46	0/1:4,2:6:10.97:159,0,11
chr10	23456516	.	AAACC	A	1564.94	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.232;DP=501;FS=36.993;HRun=0;HaplotypeScore=95.6843;InbreedingCoeff=0.9521;MQ=84.35;MQ0=0;MQRankSum=-8.704;QD=44.71;ReadPosRankSum=2.645;VQSLOD=2.0444;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:48.16:0,48,1290	0/0:9,0:9:27.09:0,27,713	0/0:20,0:20:56.41:0,56,1352	0/0:19,0:19:44.51:0,45,970	0/0:30,0:30:84.29:0,84,2256	0/0:17,0:17:48.16:0,48,1256	0/0:17,0:17:51.16:0,51,1240	0/0:29,0:29:72.25:0,72,1831	0/0:17,0:17:51.18:0,51,1366	0/0:29,0:29:84.29:0,84,2247	0/0:27,0:27:81.27:0,81,2078	0/0:17,0:17:51.16:0,51,1267	0/0:25,0:25:75.26:0,75,1979	0/0:18,0:18:51.18:0,51,1323	0/0:23,0:23:69.24:0,69,1862	0/0:19,0:19:57.20:0,57,1489	0/0:18,0:18:51.18:0,51,1365	0/0:19,0:19:57.20:0,57,1519	0/0:18,0:18:51.18:0,51,1351	0/0:21,0:21:63.20:0,63,1594	0/0:2,0:2:6.02:0,6,162	0/0:12,0:12:36.12:0,36,971	0/0:12,0:12:36.11:0,36,869	0/0:15,0:15:45.11:0,45,1154	0/0:16,0:16:48.16:0,48,1296	1/1:0,14:14:42.14:797,42,0	1/1:4,12:16:36.12:679,36,0	1/1:0,5:5:12.04:228,12,0
chr10	23456779	.	TC	T	1881.74	PASS	AB=0.545;AC=5;AF=0.089;AN=56;BaseQRankSum=11.644;DP=665;FS=3.153;HRun=3;HaplotypeScore=80.3314;InbreedingCoeff=0.7509;MQ=69.43;MQ0=0;MQRankSum=-6.015;QD=26.50;ReadPosRankSum=0.724;VQSLOD=2.7519;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:78.25:0,78,1103	0/0:18,0:18:54.18:0,54,777	0/0:19,0:19:51.16:0,51,696	0/0:24,0:24:69.19:0,69,950	0/0:22,0:22:63.20:0,63,889	0/0:24,0:24:72.24:0,72,1037	0/0:18,0:18:54.17:0,54,760	0/0:33,0:33:96.19:0,96,1341	0/0:20,0:20:60.20:0,60,864	0/0:23,0:22:66.22:0,66,949	0/0:21,0:21:60.20:0,60,859	0/0:25,0:25:75.25:0,75,1080	0/0:37,0:37:99:0,108,1536	0/0:28,0:28:84.27:0,84,1190	0/0:30,0:30:90.30:0,90,1296	0/0:34,0:34:99:0,102,1451	0/0:22,0:22:66.22:0,66,950	0/0:21,0:21:57.15:0,57,797	0/0:23,0:23:60.20:0,60,857	0/0:22,0:22:63.21:0,63,906	0/0:35,0:35:99:0,105,1506	0/0:13,0:13:39.13:0,39,560	0/0:18,0:18:48.16:0,48,691	0/0:13,0:13:36.11:0,36,500	0/0:22,0:22:66.22:0,66,949	0/1:5,25:30:54.42:742,0,54	1/1:1,37:38:93.29:1151,93,0	1/1:0,3:3:9.03:111,9,0
chr10	23456887	.	A	AGGACT	3636.49	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-8.826;DP=713;FS=0.000;HRun=0;HaplotypeScore=141.5412;InbreedingCoeff=0.9937;MQ=62.31;MQ0=0;MQRankSum=-2.271;QD=68.61;ReadPosRankSum=1.273;VQSLOD=4.9605;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,154,3135	0/0:13,0:13:39.13:0,39,791	0/0:21,0:18:48.16:0,48,848	0/0:16,0:16:21.21:0,21,686	0/0:23,0:23:66.21:0,66,1317	0/0:21,0:21:57.18:0,57,1121	0/0:27,0:27:67.47:0,67,1352	0/0:30,0:30:75.26:0,75,1530	0/0:28,0:28:72.25:0,72,1465	0/0:25,0:25:66.23:0,66,1344	0/0:26,0:26:75.26:0,75,1525	0/0:33,0:33:90.31:0,90,1831	0/0:32,0:32:87.28:0,87,1712	0/0:33,0:33:96.29:0,96,1848	1/1:4,25:29:69.24:1921,69,0	1/1:3,21:24:60.21:1716,60,0	0/0:28,0:28:75.26:0,75,1488	0/0:9,0:9:18.06:0,18,369	0/0:23,0:22:66.20:0,66,1270	0/0:21,0:21:57.18:0,57,1132	0/0:36,0:36:96.32:0,96,1931	0/0:25,0:25:69.24:0,69,1400	0/0:19,0:19:54.19:0,54,1089	0/0:28,0:28:75.24:0,75,1497	0/0:17,0:17:45.15:0,45,912	0/0:24,0:24:63.22:0,63,1271	0/0:36,0:36:90.31:0,90,1805	0/0:11,0:11:33.08:0,33,630
chr10	23457194	.	CT	C	2305.39	PASS	AC=4;AF=0.074;AN=54;BaseQRankSum=10.536;DP=730;FS=4.716;HRun=1;HaplotypeScore=86.7922;InbreedingCoeff=0.9999;MQ=64.52;MQ0=0;MQRankSum=-5.664;QD=39.75;ReadPosRankSum=1.389;VQSLOD=4.2567;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,157,2485	0/0:12,0:12:36.12:0,36,574	0/0:27,0:21:54.66:0,55,863	0/0:17,0:16:45.14:0,45,666	0/0:22,0:22:66.21:0,66,1029	0/0:28,0:28:84.27:0,84,1315	0/0:24,0:24:72.23:0,72,1126	0/0:26,0:26:78.27:0,78,1238	0/0:22,0:22:63.21:0,63,996	0/0:24,0:24:69.23:0,69,1082	0/0:15,0:15:45.15:0,45,717	0/0:33,0:33:99:0,99,1577	0/0:21,0:21:63.21:0,63,1007	0/0:27,0:27:75.26:0,75,1192	0/0:39,0:39:99:0,117,1868	0/0:32,0:32:96.33:0,96,1532	0/0:36,0:36:99:0,108,1718	0/0:22,0:22:66.20:0,66,1014	0/0:24,0:24:72.23:0,72,1110	0/0:22,0:22:66.23:0,66,1055	0/0:39,0:39:99:0,114,1789	0/0:22,0:22:63.21:0,63,1004	0/0:22,0:22:66.21:0,66,1014	0/0:45,0:45:99:0,135,2158	0/0:19,0:19:57.19:0,57,911	1/1:0,35:35:99:1463,105,0	1/1:0,23:23:69.23:963,69,0	./.
chr10	23457287	.	T	TG	2708.10	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=12.145;DP=751;FS=5.301;HRun=1;HaplotypeScore=83.7380;InbreedingCoeff=0.9995;MQ=76.49;MQ0=0;MQRankSum=-3.958;QD=36.60;ReadPosRankSum=0.780;VQSLOD=3.9983;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,124,1566	0/0:11,0:11:33.11:0,33,422	0/0:28,0:28:59.90:0,60,929	0/0:24,0:23:61.81:0,62,728	0/0:24,0:24:72.21:0,72,918	0/0:27,0:27:81.26:0,81,1051	0/0:26,0:26:78.19:0,78,979	0/0:32,0:32:87.28:0,87,1119	0/0:27,0:27:75.24:0,75,974	0/0:26,0:26:72.23:0,72,935	0/0:17,0:17:51.17:0,51,662	0/0:28,0:28:84.26:0,84,1075	0/0:26,0:26:72.23:0,72,935	0/0:25,0:25:75.24:0,75,962	0/0:41,0:41:99:0,123,1583	0/0:25,0:25:72.22:0,72,919	0/0:33,0:33:96.31:0,96,1245	0/0:22,0:21:66.21:0,66,856	0/0:24,0:24:63.20:0,63,817	0/0:23,0:23:63.19:0,63,804	0/0:41,0:41:99:0,123,1597	0/0:22,0:22:63.20:0,63,818	0/0:25,0:25:75.23:0,75,960	0/0:29,0:29:87.28:0,87,1129	0/0:28,0:28:75.22:0,75,947	1/1:4,26:30:78.26:1168,78,0	1/1:6,26:32:87.29:1278,87,0	1/1:3,9:12:27.09:404,27,0
chr10	23457672	.	G	GGAGA	2470.60	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=10.232;DP=723;FS=9.559;HRun=0;HaplotypeScore=132.4790;InbreedingCoeff=0.7989;MQ=64.72;MQ0=8;MQRankSum=-7.503;QD=20.09;ReadPosRankSum=-0.780;VQSLOD=2.3390;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,126,2169	0/0:14,0:14:42.11:0,42,705	0/0:59,0:22:34.19:0,34,702	0/1:77,0:30:63.66:64,0,400	0/0:27,0:27:57.19:0,57,971	0/0:20,0:20:54.18:0,54,923	0/0:29,0:29:81.11:0,81,1371	0/0:27,0:27:51.17:0,51,880	0/0:25,0:25:69.07:0,69,1164	0/0:32,0:32:81.28:0,81,1383	0/0:25,0:25:63.17:0,63,1041	0/0:19,0:19:51.14:0,51,842	0/0:23,0:23:63.22:0,63,1100	0/0:27,0:27:78.25:0,78,1347	0/0:29,0:29:75.26:0,75,1310	0/0:16,0:16:45.15:0,45,795	0/0:26,0:26:68.60:0,69,1157	0/0:20,0:20:57.17:0,57,971	0/0:16,0:16:45.14:0,45,743	0/0:23,0:23:63.20:0,63,1049	0/0:19,0:19:45.13:0,45,761	0/0:16,0:16:45.15:0,45,795	0/0:14,0:14:33.11:0,33,526	0/0:15,0:15:36.12:0,36,635	0/0:32,0:32:90.30:0,90,1529	1/1:10,14:24:61.24:1443,61,0	1/1:10,7:18:44.82:1001,45,0	1/1:3,1:4:6.02:105,6,0
chr10	23457681	.	GGA	G	868	PASS	AB=0.881;AC=5;AF=0.089;AN=56;BaseQRankSum=10.211;DP=712;FS=8.496;HRun=0;HaplotypeScore=110.8397;InbreedingCoeff=0.3254;MQ=62.35;MQ0=7;MQRankSum=-7.129;QD=7.29;ReadPosRankSum=0.243;VQSLOD=2.7338;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,129,2561	0/0:15,0:15:45.12:0,45,859	0/0:60,0:24:45.65:0,46,996	0/1:72,1:29:64.02:64,0,519	0/0:22,0:22:60.21:0,60,1180	0/0:20,0:20:57.19:0,57,1101	0/0:29,0:29:84.29:0,84,1661	0/0:28,0:28:75.25:0,75,1368	0/0:23,0:23:66.14:0,66,1327	0/0:28,0:28:84.29:0,84,1639	0/0:24,0:24:69.19:0,69,1302	0/0:19,0:19:57.16:0,57,1064	0/0:23,0:23:69.24:0,69,1371	0/0:26,0:26:78.25:0,78,1548	0/0:29,0:29:84.29:0,84,1698	0/0:19,0:19:57.16:0,57,1054	0/0:25,0:25:74.47:0,74,1415	0/0:23,0:23:69.24:0,69,1330	0/0:18,0:18:54.17:0,54,1019	0/0:23,0:23:66.21:0,66,1231	0/0:17,0:17:45.15:0,45,905	0/0:16,0:16:48.16:0,48,950	0/0:12,0:12:33.11:0,33,644	0/0:17,0:17:48.64:0,49,943	0/0:32,0:32:93.32:0,93,1843	0/1:23,2:25:86.83:431,0,87	0/1:12,7:19:7.40:414,0,7	1/1:2,0:2:6.02:74,6,0
chr10	23457685	.	GA	G	1328.16	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=11.157;DP=703;FS=18.628;HRun=2;HaplotypeScore=94.2334;InbreedingCoeff=0.7829;MQ=61.81;MQ0=7;MQRankSum=-9.199;QD=11.86;ReadPosRankSum=-0.606;VQSLOD=0.8216;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,126,1999	0/0:16,0:16:42.14:0,42,666	0/0:59,0:23:33.09:0,33,795	0/1:70,0:28:10.97:11,0,420	0/0:22,0:22:60.18:0,60,888	0/0:20,0:20:60.17:0,60,897	0/0:32,0:32:77.03:0,77,1292	0/0:28,0:28:72.23:0,72,1104	0/0:23,0:23:66.22:0,66,1052	0/0:28,0:28:84.27:0,84,1292	0/0:22,0:22:63.21:0,63,991	0/0:19,0:18:54.18:0,54,857	0/0:22,0:22:66.23:0,66,1055	0/0:27,0:27:81.20:0,81,1175	0/0:28,0:28:84.29:0,84,1339	0/0:19,0:19:57.19:0,57,909	0/0:24,0:24:56.27:0,56,1048	0/0:23,0:23:69.24:0,69,1102	0/0:15,0:15:45.15:0,45,696	0/0:22,0:22:63.21:0,63,986	0/0:16,0:16:42.14:0,42,671	0/0:16,0:16:48.16:0,48,763	0/0:13,0:13:36.12:0,36,565	0/0:18,0:18:48.16:0,48,767	0/0:32,0:32:90.28:0,90,1380	1/1:3,19:22:65.74:835,66,0	1/1:7,11:18:48.05:592,48,0	1/1:1,1:2:2.97:28,3,0
chr10	23457686	.	AG	A	777.44	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=10.938;DP=696;FS=17.267;HRun=3;HaplotypeScore=96.1807;InbreedingCoeff=0.8505;MQ=61.84;MQ0=6;MQRankSum=-8.892;QD=18.96;ReadPosRankSum=-0.196;VQSLOD=2.2824;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,127,1774	0/0:15,0:15:42.14:0,42,601	0/0:60,1:25:57.99:0,58,774	0/0:70,0:27:0.37:0,0,348	0/0:21,0:21:54.16:0,54,725	0/0:20,0:20:60.20:0,60,851	0/0:30,1:31:53.24:0,53,1157	0/0:27,0:27:66.22:0,66,935	0/0:22,0:22:66.21:0,66,932	0/0:28,0:28:81.22:0,81,1123	0/0:22,0:22:63.21:0,63,899	0/0:19,0:18:54.17:0,54,759	0/0:22,0:22:66.22:0,66,950	0/0:25,0:25:69.22:0,69,966	0/0:28,0:28:84.27:0,84,1192	0/0:19,0:19:57.19:0,57,819	0/0:23,1:24:33.32:0,33,869	0/0:23,0:23:69.23:0,69,992	0/0:15,0:15:42.13:0,42,588	0/0:22,0:22:63.20:0,63,888	0/0:16,0:16:42.14:0,42,605	0/0:16,0:16:48.15:0,48,671	0/0:13,0:13:36.12:0,36,517	0/0:19,0:19:48.63:0,49,692	0/0:32,0:32:87.22:0,87,1187	1/1:19,3:22:65.59:493,66,0	1/1:12,6:18:47.78:399,48,0	1/1:1,0:1:2.88:15,3,0
chr10	23457722	.	GA	G	921.39	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.314;DP=606;FS=3.211;HRun=3;HaplotypeScore=93.9820;InbreedingCoeff=0.9164;MQ=69.73;MQ0=2;MQRankSum=-5.643;QD=27.10;ReadPosRankSum=0.438;VQSLOD=2.8378;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,111,1562	0/0:9,0:9:27.09:0,27,388	0/0:36,1:25:53.28:0,53,759	0/0:54,0:37:43.37:0,43,814	0/0:19,0:19:45.57:0,46,607	0/0:19,0:19:51.17:0,51,729	0/0:23,0:23:69.20:0,69,970	0/0:32,0:32:93.30:0,93,1315	0/0:20,0:20:57.19:0,57,815	0/0:25,0:25:72.23:0,72,1020	0/0:21,0:21:48.03:0,48,621	0/0:14,0:14:42.11:0,42,568	0/0:26,0:26:69.23:0,69,985	0/0:15,0:15:45.15:0,45,648	0/0:22,0:22:66.21:0,66,932	0/0:18,0:18:54.18:0,54,776	0/0:19,0:19:56.94:0,57,751	0/0:17,0:18:41.98:0,42,682	0/0:18,0:18:48.14:0,48,666	0/0:20,0:20:48.07:0,48,640	0/0:28,0:28:84.27:0,84,1188	0/0:13,0:13:36.12:0,36,517	0/0:13,0:13:36.08:0,36,494	0/0:21,0:21:63.15:0,63,864	0/0:25,0:25:75.21:0,75,1055	1/1:2,17:19:51.16:611,51,0	1/1:1,14:15:36.11:431,36,0	0/0:2,0:2:2.92:0,3,17
chr10	23457974	.	CTGT	C	6214.33	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=5.865;DP=251;FS=10.512;HRun=0;HaplotypeScore=175.5992;InbreedingCoeff=0.8929;MQ=66.94;MQ0=0;MQRankSum=-6.518;QD=30.46;ReadPosRankSum=2.840;VQSLOD=4.3124;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,5:5:12.03:131,12,0	1/1:0,8:8:20.90:230,21,0	0/0:13,0:13:39.13:0,39,723	0/0:13,0:13:35.66:0,36,587	1/1:0,18:19:48.11:530,48,0	1/1:0,4:5:15.04:164,15,0	1/1:0,14:14:39.09:420,39,0	1/1:0,12:12:36.09:381,36,0	1/1:0,7:7:21.06:231,21,0	1/1:0,13:13:39.10:431,39,0	1/1:0,15:15:45.07:472,45,0	1/1:0,8:8:24.06:262,24,0	1/1:0,4:4:12.03:130,12,0	1/1:0,9:9:27.07:306,27,0	1/1:0,7:7:21.06:229,21,0	1/1:2,8:10:24.06:262,24,0	1/1:0,2:2:6.02:65,6,0	1/1:0,5:5:15.04:159,15,0	1/1:0,3:3:9.02:101,9,0	1/1:0,8:8:24.01:247,24,0	1/1:1,3:4:6.02:65,6,0	1/1:0,11:11:30.06:325,30,0	1/1:0,12:12:36.08:392,36,0	1/1:0,6:6:11.34:133,11,0	1/1:0,17:17:51.11:548,51,0	0/0:7,0:7:21.07:0,21,306	0/0:9,0:9:21.06:0,21,311	0/0:5,0:5:9.03:0,9,125
chr10	23457979	.	T	TC	6621.41	PASS	AB=1.000;AC=47;AF=0.839;AN=56;BaseQRankSum=7.304;DP=308;FS=20.486;HRun=0;HaplotypeScore=210.0886;InbreedingCoeff=0.8551;MQ=64.94;MQ0=0;MQRankSum=-6.641;QD=25.18;ReadPosRankSum=3.379;VQSLOD=2.4691;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,5:11:30.05:303,30,0	1/1:2,8:10:24.02:227,24,0	0/0:16,0:16:45.15:0,45,630	0/0:15,0:15:44.92:0,45,561	1/1:2,18:20:47.96:427,48,0	1/1:0,5:5:15.02:142,15,0	1/1:3,14:17:48.02:496,48,0	1/1:4,12:16:45.12:515,45,0	1/1:0,7:7:21.03:198,21,0	1/1:7,13:20:60.14:710,60,0	1/1:2,15:17:44.79:381,45,0	1/1:0,8:8:24.04:231,24,0	1/1:4,4:8:18.01:181,18,0	1/1:0,9:9:27.03:249,27,0	1/1:1,7:8:24.04:243,24,0	1/1:0,8:8:24.04:231,24,0	1/1:3,2:5:15.03:146,15,0	1/1:2,5:7:21.05:213,21,0	1/1:2,3:5:15.04:183,15,0	1/1:3,8:11:26.90:239,27,0	1/1:1,3:4:9.01:85,9,0	1/1:3,11:14:32.96:293,33,0	1/1:5,12:17:35.88:306,36,0	1/1:2,6:8:15.01:137,15,0	1/1:2,17:19:51:479,51,0	0/1:9,0:9:4.49:4,0,308	0/0:9,0:9:26.97:0,27,312	0/0:5,0:5:9.03:0,9,126
chr10	23458085	.	TG	T	817.31	PASS	AC=6;AF=0.125;AN=48;BaseQRankSum=0.067;DP=234;FS=27.815;HRun=1;HaplotypeScore=239.3362;InbreedingCoeff=0.8251;MQ=37.12;MQ0=0;MQRankSum=0.410;QD=30.27;ReadPosRankSum=-0.202;VQSLOD=-0.6772;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,5:5:12.04:167,12,0	0/0:15,0:15:44.84:0,45,350	./.	./.	0/0:15,0:15:32.58:0,33,244	0/0:7,0:7:17.93:0,18,140	0/0:7,0:7:17.89:0,18,136	0/0:4,0:4:11.93:0,12,87	0/0:6,0:6:14.95:0,15,119	0/0:11,0:11:32.82:0,33,244	0/0:7,0:7:17.66:0,18,116	0/0:3,0:3:8.95:0,9,68	0/0:10,0:10:29.91:0,30,238	0/0:10,0:10:29.77:0,30,230	1/1:0,5:5:15.04:194,15,0	1/1:0,17:17:45.09:589,45,0	0/0:4,0:4:8.95:0,9,69	0/0:2,0:2:5.96:0,6,43	0/0:7,0:7:17.86:0,18,129	0/0:11,0:11:29.87:0,30,233	./.	0/0:12,0:12:29.90:0,30,233	0/0:13,0:13:32.88:0,33,259	0/0:2,0:2:2.98:0,3,22	0/0:7,0:7:17.96:0,18,145	0/0:29,0:29:77.72:0,78,612	0/0:23,0:21:59.59:0,60,464	./.
chr10	23458227	.	GATCTGGCCTGATGA	G	1334.94	PASS	AB=0.862;AC=17;AF=0.304;AN=56;BaseQRankSum=7.563;DP=293;FS=3.641;HRun=0;HaplotypeScore=218.0832;InbreedingCoeff=-0.4587;MQ=93.08;MQ0=0;MQRankSum=-2.933;QD=8.29;ReadPosRankSum=3.409;VQSLOD=2.6151;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:14.92:0,15,362	0/1:5,1:6:83.72:84,0,462	0/0:22,0:22:51.75:0,52,2477	0/0:33,0:33:99:0,99,4241	0/1:12,2:14:32.69:46,0,33	0/1:3,2:5:97.24:97,0,337	0/0:9,0:9:27.05:0,27,678	0/0:17,0:17:47.03:0,47,1518	0/1:2,1:3:92.78:93,0,217	0/1:7,1:8:78.45:78,0,844	0/0:15,0:15:29.71:0,30,292	0/1:3,1:4:44.70:45,0,329	0/1:8,1:9:77.79:78,0,577	0/0:2,0:2:6.02:0,6,227	0/1:8,1:9:74.74:75,0,831	0/1:13,3:16:99:257,0,1247	0/1:10,1:11:74.88:75,0,639	0/0:5,0:5:15.05:0,15,543	0/0:8,0:8:18.06:0,18,584	0/1:13,1:14:23.25:23,0,167	0/0:11,0:11:23.91:0,24,474	0/1:6,2:8:99:130,0,170	0/1:7,4:11:99:139,0,332	0/1:4,1:5:92.11:92,0,126	0/1:10,1:11:37.71:38,0,486	0/1:14,0:14:53.31:53,0,1445	0/1:13,0:13:90.93:91,0,1123	0/0:1,0:1:3.01:0,3,108
chr10	23458484	.	CCTTTTCCTGTTACTCT	C	25804.87	PASS	AC=44;AF=0.815;AN=54;BaseQRankSum=13.532;DP=445;FS=2.520;HRun=0;HaplotypeScore=224.6561;InbreedingCoeff=0.9312;MQ=96.97;MQ0=0;MQRankSum=-13.161;QD=81.92;ReadPosRankSum=7.576;VQSLOD=4.3564;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:7,12:19:21.07:890,21,0	./.	0/0:30,0:30:84.29:0,84,5228	0/0:27,0:27:78.17:0,78,4406	1/1:0,10:10:20.85:905,21,0	1/1:4,19:23:51.17:2395,51,0	1/1:7,11:18:27.09:1278,27,0	1/1:14,10:24:30.07:837,30,0	1/1:4,9:13:24.08:1136,24,0	1/1:4,7:11:21.04:821,21,0	1/1:3,11:14:27.09:1236,27,0	1/1:6,17:23:48.16:2272,48,0	1/1:3,16:19:45.15:2129,45,0	1/1:1,16:17:42.14:1988,42,0	1/1:2,20:22:54.19:2555,54,0	1/1:1,15:16:36.12:1704,36,0	1/1:5,8:13:18.06:783,18,0	1/1:1,7:8:12.04:568,12,0	1/1:7,7:14:18.03:618,18,0	1/1:2,6:8:15.05:710,15,0	1/1:5,3:8:9.03:426,9,0	1/1:0,6:6:12.04:568,12,0	1/1:1,10:11:24.08:1136,24,0	1/1:0,4:4:6.02:284,6,0	1/1:5,9:14:12.04:568,12,0	0/0:35,0:35:99:0,99,7148	0/0:21,0:21:60.21:0,60,4269	0/0:14,0:14:42.14:0,42,2530
chr10	23458918	.	CAT	C	918.02	PASS	AB=1.000;AC=30;AF=0.652;AN=46;BaseQRankSum=0.375;DP=267;FS=3.250;HRun=0;HaplotypeScore=60.3631;InbreedingCoeff=0.3508;MQ=50.06;MQ0=27;MQRankSum=1.358;QD=5.16;ReadPosRankSum=1.149;VQSLOD=2.3517;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:13:2.94:18,3,0	0/0:0,1:1:0:0,0,0	0/0:39,0:9:15.87:0,16,203	0/0:26,0:8:15.44:0,15,158	0/1:5,0:5:1.77:61,0,2	1/1:15,0:13:9.34:50,9,0	1/1:8,0:7:10.57:61,11,0	1/1:20,2:20:44.40:345,44,0	1/1:12,0:12:12.63:85,13,0	1/1:6,0:5:2.38:43,2,0	1/1:4,0:4:2.90:16,3,0	0/1:8,0:8:11.37:29,0,11	./.	1/1:7,0:7:2.04:6,2,0	./.	./.	1/1:17,0:14:13.80:97,14,0	1/1:22,1:21:12.03:107,12,0	1/1:9,0:6:11.69:88,12,0	1/1:4,0:3:2.90:16,3,0	0/0:7,0:2:2.22:0,2,7	./.	1/1:5,0:5:1.55:4,2,0	0/1:9,0:9:5.71:11,0,6	0/1:11,0:10:3.24:17,0,3	./.	0/0:5,0:5:3:0,3,26	0/0:4,0:3:3:0,3,26
chr10	23458924	.	CA	C	2381.09	PASS	AB=0.500;AC=35;AF=0.795;AN=44;BaseQRankSum=-0.904;DP=264;FS=1.128;HRun=2;HaplotypeScore=54.4989;InbreedingCoeff=0.5275;MQ=50.19;MQ0=26;MQRankSum=1.865;QD=13.92;ReadPosRankSum=2.126;VQSLOD=3.0013;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	0/1:0,1:1:0:0,0,0	0/0:37,0:9:19.48:0,19,226	0/0:25,0:7:15.03:0,15,167	1/1:1,4:5:8.94:113,9,0	1/1:14,0:12:9.01:95,9,0	1/1:0,8:7:15.01:161,15,0	1/1:20,4:22:63.15:737,63,0	1/1:1,10:12:16.09:170,16,0	1/1:2,4:5:12.03:142,12,0	1/1:0,4:4:3.01:39,3,0	1/1:6,1:7:3.01:30,3,0	./.	1/1:7,1:8:3:30,3,0	./.	./.	1/1:5,11:13:29.60:325,30,0	1/1:18,5:21:29.15:337,29,0	1/1:4,5:6:12.03:145,12,0	1/1:4,1:4:3.01:38,3,0	0/0:4,3:2:2.04:0,2,6	./.	1/1:5,0:5:1.55:4,2,0	1/1:7,2:9:6:62,6,0	1/1:8,2:9:6.01:65,6,0	./.	1/1:5,0:5:2.60:10,3,0	0/0:4,0:3:0.89:0,1,2
chr10	23458925	.	A	AC	2614.18	PASS	AC=34;AF=0.810;AN=42;BaseQRankSum=-1.187;DP=256;FS=0.000;HRun=1;HaplotypeScore=51.1179;InbreedingCoeff=0.5453;MQ=48.06;MQ0=26;MQRankSum=1.838;QD=15.75;ReadPosRankSum=3.139;VQSLOD=3.6158;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:4,6:10:3.01:0,3,34	./.	0/0:35,0:9:19.48:0,19,219	0/0:24,0:6:15.02:0,15,163	1/1:4,0:4:8.84:77,9,0	1/1:0,13:11:9.03:134,9,0	1/1:8,0:7:15.05:211,15,0	1/1:9,17:24:68.98:819,69,0	1/1:11,1:12:14.66:164,15,0	1/1:5,0:4:12:124,12,0	1/1:4,0:4:2.97:20,3,0	1/1:2,5:7:2.92:17,3,0	./.	1/1:1,8:9:3.01:48,3,0	./.	./.	1/1:11,5:13:29.69:345,30,0	1/1:6,16:21:16.24:442,16,0	1/1:9,1:7:11.92:115,12,0	1/1:1,3:3:3.01:39,3,0	0/0:7,0:2:2.04:0,2,6	./.	./.	1/1:3,4:7:5.98:68,6,0	1/1:2,7:8:6.02:91,6,0	./.	1/1:3,0:5:3:28,3,0	1/1:1,0:3:1.25:3,1,0
chr10	23459398	.	ATAG	A	18605.30	PASS	AB=0.533;AC=39;AF=0.696;AN=56;BaseQRankSum=-1.341;DP=662;FS=4.739;HRun=0;HaplotypeScore=119.1926;InbreedingCoeff=0.8803;MQ=64.83;MQ0=1;MQRankSum=-5.038;QD=41.25;ReadPosRankSum=3.838;VQSLOD=6.0327;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:90.27:0,90,1982	1/1:0,16:16:36.12:635,36,0	0/0:18,1:15:41.36:0,41,829	0/0:31,0:29:69.08:0,69,1679	1/1:0,24:24:65.88:959,66,0	1/1:2,45:47:99:1905,114,0	1/1:0,20:20:51.17:898,51,0	1/1:1,30:30:87.21:1332,87,0	1/1:0,28:28:72.20:1237,72,0	1/1:0,13:13:39.12:652,39,0	1/1:0,14:14:42.10:707,42,0	1/1:0,14:14:33.11:581,33,0	1/1:1,24:25:57.20:1005,57,0	1/1:0,24:24:48.08:780,48,0	0/0:28,0:28:81.24:0,81,1755	0/0:33,0:33:99:0,99,2185	1/1:2,29:31:3.39:1193,3,0	0/1:2,14:16:93.59:592,0,94	1/1:2,15:16:45.11:671,45,0	1/1:0,24:24:72.13:1171,72,0	1/1:0,22:22:57.15:972,57,0	1/1:1,17:18:42.01:669,42,0	1/1:1,18:19:42.14:740,42,0	1/1:0,32:32:70.18:1218,70,0	1/1:1,15:16:39.13:688,39,0	0/0:27,0:27:81.28:0,81,1895	0/0:39,0:39:99:0,111,2480	0/0:3,0:3:9.03:0,9,188
chr10	23459416	.	A	AC	1796.97	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-10.937;DP=694;FS=2.660;HRun=4;HaplotypeScore=146.2981;InbreedingCoeff=0.9956;MQ=58.24;MQ0=5;MQRankSum=1.193;QD=32.67;ReadPosRankSum=3.063;VQSLOD=1.8978;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:90.26:0,90,1020	0/0:18,0:18:45.13:0,45,510	0/0:23,0:16:45.13:0,45,510	0/0:23,0:20:45.11:0,45,499	0/0:28,0:28:81.22:0,81,909	0/0:44,0:44:99:0,111,1259	0/0:27,0:27:66.18:0,66,747	0/0:37,0:37:96.26:0,96,1082	0/0:27,0:27:69.17:0,69,783	0/0:11,0:11:33.09:0,33,374	0/0:16,0:16:48.14:0,48,544	0/0:21,0:21:45.11:0,45,499	0/0:29,0:29:69.19:0,69,782	0/0:24,0:24:54.15:0,54,612	1/1:3,19:22:54.18:739,54,0	1/1:4,29:33:87.29:1180,87,0	0/0:32,0:32:78.20:0,78,871	0/0:16,0:16:36.10:0,36,408	0/0:19,0:17:42.12:0,42,476	0/0:27,0:27:78.22:0,78,884	0/0:22,0:22:60.16:0,60,670	0/0:16,0:16:45.13:0,45,510	0/0:18,0:18:45.10:0,45,490	0/0:34,0:34:77.87:0,78,870	0/0:21,0:21:60.17:0,60,680	0/0:29,0:29:81.22:0,81,911	0/0:38,0:38:99:0,111,1258	0/0:7,0:7:18.05:0,18,204
chr10	23459544	.	C	CAA	2757	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-0.903;DP=724;FS=5.810;HRun=8;HaplotypeScore=179.4037;InbreedingCoeff=0.9932;MQ=66.97;MQ0=1;MQRankSum=-0.087;QD=31.69;ReadPosRankSum=-1.513;VQSLOD=1.6635;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:78:0,78,822	0/0:8,0:9:17.77:0,18,179	0/0:25,0:25:39.69:0,40,499	0/0:21,0:20:23.81:0,24,380	0/0:36,0:36:99:0,102,1135	0/0:50,0:50:99:0,135,1495	0/0:21,0:21:40.43:0,40,645	0/0:36,0:36:75.15:0,75,816	0/0:21,0:21:63.13:0,63,680	0/0:30,0:30:81.13:0,81,877	0/0:21,0:21:54.11:0,54,584	0/0:19,0:19:48.02:0,48,509	0/0:25,0:25:75.20:0,75,835	0/0:18,0:18:54.15:0,54,601	0/0:23,0:23:59.79:0,60,624	0/0:19,0:19:57.15:0,57,626	0/0:26,0:26:63.03:0,63,751	0/0:19,0:19:48.13:0,48,535	0/0:23,0:23:66.15:0,66,719	0/0:37,0:36:99:0,105,1140	0/0:31,0:31:84.18:0,84,914	0/0:28,0:28:78.20:0,78,869	0/0:21,0:21:57.14:0,57,635	0/0:26,0:26:66.17:0,66,734	0/0:24,0:24:66.17:0,66,736	1/1:5,28:37:95.10:1243,95,0	1/1:8,32:41:90.27:1370,90,0	1/1:1,8:9:18.06:286,18,0
chr10	23459897	.	C	CA	1819.92	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=3.985;DP=601;FS=8.338;HRun=7;HaplotypeScore=214.0809;InbreedingCoeff=0.9534;MQ=60.03;MQ0=0;MQRankSum=-2.587;QD=30.33;ReadPosRankSum=2.564;VQSLOD=0.8006;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:48.07:0,48,462	0/0:13,0:13:27.04:0,27,260	0/0:22,0:22:56.95:0,57,545	0/0:17,0:17:32.60:0,33,291	0/0:35,0:35:87.11:0,87,826	0/0:21,0:21:54.09:0,54,520	0/0:19,0:19:39.04:0,39,370	0/0:29,0:29:75.11:0,75,724	0/0:22,0:22:48.07:0,48,463	0/0:33,0:33:87.11:0,87,830	0/0:22,0:22:60.07:0,60,571	0/0:19,0:19:45.07:0,45,434	0/0:27,0:27:72.11:0,72,694	0/0:29,0:29:69.10:0,69,661	0/0:28,0:28:51.08:0,51,491	0/0:29,0:29:69.10:0,69,660	0/0:18,0:18:33.05:0,33,318	0/0:5,0:5:15.02:0,15,145	0/0:16,0:16:42.05:0,42,399	0/0:22,0:22:60.08:0,60,570	0/0:12,0:12:30.04:0,30,290	0/0:18,0:18:42.05:0,42,399	0/0:29,0:29:54.08:0,54,519	0/0:10,0:10:21.03:0,21,203	0/0:13,0:13:30.05:0,30,289	1/1:3,23:26:66.20:796,66,0	1/1:1,31:32:90.28:1086,90,0	1/1:0,2:2:6.02:72,6,0
chr10	23459911	.	AAGCAACAGCAACAGC	A	21032.98	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=5.965;DP=544;FS=6.136;HRun=0;HaplotypeScore=258.9641;InbreedingCoeff=0.7038;MQ=59.14;MQ0=2;MQRankSum=-6.491;QD=43.19;ReadPosRankSum=7.322;VQSLOD=3.0864;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,15:25:9.03:376,9,0	1/1:2,7:9:18.06:751,18,0	0/0:34,0:31:34.28:0,34,1527	0/0:23,0:20:27.09:0,27,1519	1/1:15,16:31:42.14:1568,42,0	1/1:5,14:19:36.12:1502,36,0	1/1:10,8:18:6.02:250,6,0	1/1:24,0:24:17.90:166,18,0	1/1:4,13:17:27.09:1127,27,0	1/1:12,16:28:39.06:1182,39,0	1/1:8,11:19:30.10:1161,30,0	1/1:7,8:15:21.07:876,21,0	1/1:11,12:23:36.12:1502,36,0	1/1:14,12:26:21.07:875,21,0	1/1:7,13:20:24.08:1001,24,0	1/1:5,19:24:39.13:1627,39,0	1/1:5,13:18:12.04:501,12,0	1/1:3,4:7:3.01:125,3,0	1/1:10,3:13:9.01:221,9,0	1/1:11,8:19:30.10:1140,30,0	1/1:12,1:13:14.86:210,15,0	1/1:9,10:19:7.27:373,7,0	1/1:12,14:26:18.06:712,18,0	1/1:4,9:13:15.05:626,15,0	1/1:4,8:12:18.06:751,18,0	1/1:21,0:21:30.10:1048,30,0	1/1:26,0:26:36.12:1258,36,0	1/1:2,0:2:3.01:105,3,0
chr10	23459916	.	ACAGCAACAGCAGCAACAGCAACAG	A	4703.56	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-0.612;DP=506;FS=1.404;HRun=0;HaplotypeScore=372.2364;InbreedingCoeff=0.9279;MQ=57.82;MQ0=4;MQRankSum=-4.208;QD=102.25;ReadPosRankSum=4.063;VQSLOD=3.7846;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:20.54:0,21,198	0/0:9,0:9:20.30:0,20,118	0/0:35,0:27:42.39:0,42,3152	0/0:27,0:22:39.06:0,39,3207	0/0:28,0:28:55.70:0,56,665	0/0:17,0:17:40.52:0,41,234	0/0:17,0:17:20.77:0,21,284	0/0:21,0:21:39.11:0,39,1050	0/0:16,0:16:25.88:0,26,138	0/0:26,0:26:48.74:0,49,879	0/0:18,0:18:41.02:0,41,369	0/0:13,0:13:32.14:0,32,207	0/0:21,0:21:46.33:0,46,499	0/0:21,0:21:29.18:0,29,207	0/0:15,0:15:26:0,26,148	0/0:21,0:21:40.40:0,40,226	0/0:18,0:18:23.55:0,24,229	0/0:7,0:7:8.90:0,9,98	0/0:12,0:12:29.91:0,30,540	0/0:16,0:16:38.02:0,38,381	0/0:12,0:12:26.82:0,27,545	0/0:17,0:17:29.68:0,30,651	0/0:26,0:26:38.23:0,38,410	0/0:11,0:11:17.38:0,17,126	0/0:11,0:11:20.29:0,20,147	1/1:10,10:20:39.01:1980,39,0	1/1:12,12:24:59.99:2510,60,0	1/1:1,1:2:5.99:214,6,0
chr10	23460919	.	TGCGC	T	1489.42	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=1.636;DP=525;FS=8.965;HRun=0;HaplotypeScore=124.3059;InbreedingCoeff=0.9031;MQ=73.11;MQ0=6;MQRankSum=0.973;QD=38.19;ReadPosRankSum=1.987;VQSLOD=3.7343;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:8.97:0,9,95	0/0:12,0:12:30.06:0,30,414	0/0:21,0:13:19.84:0,20,466	0/0:35,0:25:39.88:0,40,826	0/0:28,0:28:72.23:0,72,1076	0/0:19,0:17:48.16:0,48,734	0/0:23,0:23:50.29:0,50,662	0/0:28,0:27:84.26:0,84,1324	0/0:11,0:11:24.08:0,24,377	0/0:18,0:17:51.16:0,51,785	0/0:17,0:17:48.12:0,48,663	0/0:18,0:18:50.20:0,50,771	0/0:13,0:13:38.61:0,39,520	0/0:22,0:22:51.16:0,51,778	0/0:9,0:9:3.18:0,3,70	0/0:17,0:17:10.19:0,10,132	0/0:26,0:26:78.12:0,78,1048	0/0:19,0:18:51.11:0,51,745	0/0:24,0:24:66.95:0,67,1038	0/0:18,0:18:36.03:0,36,465	0/0:26,0:26:51.17:0,51,777	0/0:9,0:9:21.06:0,21,297	0/0:11,0:11:21.07:0,21,323	0/0:25,0:24:33.09:0,33,468	0/0:15,0:15:42.14:0,42,673	1/1:0,11:11:30.08:450,30,0	1/1:17,0:17:51.03:780,51,0	1/1:11,0:9:24.97:401,25,0
chr10	23460975	.	C	CTT	9188.05	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=3.747;DP=560;FS=5.221;HRun=3;HaplotypeScore=134.4308;InbreedingCoeff=0.9230;MQ=71.67;MQ0=5;MQRankSum=-6.455;QD=18.16;ReadPosRankSum=1.093;VQSLOD=2.3319;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,28:31:7.84:112,8,0	1/1:9,0:9:22.77:181,23,0	0/0:24,0:18:28.44:0,28,324	0/0:30,0:22:48.46:0,48,448	1/1:21,0:21:45.43:377,45,0	1/1:13,0:13:35.79:276,36,0	1/1:27,1:28:63.69:577,64,0	1/1:23,0:22:59.99:541,60,0	1/1:24,0:24:50.01:401,50,0	1/1:25,0:24:58.91:514,59,0	1/1:18,0:18:47.93:394,48,0	1/1:14,0:14:25.35:216,25,0	1/1:13,0:13:34.77:311,35,0	1/1:17,0:17:30.59:262,31,0	1/1:20,1:20:50.27:480,50,0	1/1:18,0:18:44.99:449,45,0	1/1:2,22:24:15.03:239,15,0	1/1:3,10:12:9.02:135,9,0	1/1:3,18:21:56.99:535,57,0	1/1:3,14:16:40.54:339,41,0	1/1:16,1:17:30.45:284,30,0	1/1:21,0:21:53.86:452,54,0	1/1:18,0:18:32.68:269,33,0	1/1:23,0:22:26.79:199,27,0	1/1:20,0:20:52.59:411,53,0	1/1:24,0:24:53.04:467,53,0	1/1:24,0:24:65.96:574,66,0	1/1:9,0:9:20.96:195,21,0
chr10	23461320	.	A	AT	2348.15	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=2.913;DP=611;FS=6.196;HRun=6;HaplotypeScore=61.3660;InbreedingCoeff=0.9925;MQ=74.76;MQ0=0;MQRankSum=-1.800;QD=33.07;ReadPosRankSum=1.524;VQSLOD=3.9926;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:69.15:0,69,704	0/0:5,0:5:15.02:0,15,146	0/0:11,0:11:20.79:0,21,214	0/0:12,0:12:36.03:0,36,348	0/0:35,0:34:93.19:0,93,942	0/0:27,0:27:69.15:0,69,704	0/0:14,0:14:42.10:0,42,429	0/0:38,0:38:96.21:0,96,974	0/0:14,0:14:42.06:0,42,414	0/0:28,0:28:72.16:0,72,735	0/0:26,0:26:66.15:0,66,673	0/0:26,0:26:72.11:0,72,717	0/0:27,0:27:72.14:0,72,727	0/0:17,0:17:42.09:0,42,428	0/0:34,0:34:96.22:0,96,979	0/0:26,0:26:75.16:0,75,759	0/0:18,0:18:49.65:0,50,487	0/0:24,0:24:60.13:0,60,612	0/0:18,0:18:42.06:0,42,420	0/0:18,0:18:36.06:0,36,361	0/0:11,0:11:33.08:0,33,337	0/0:25,0:25:69.15:0,69,704	0/0:20,0:20:57.11:0,57,574	0/0:18,0:18:51.08:0,51,509	0/0:20,0:20:54.08:0,54,535	1/1:0,19:19:57.18:717,57,0	1/1:1,35:35:99:1283,102,0	1/1:3,13:16:39.12:491,39,0
chr10	23461480	.	AG	A	1095.43	PASS	AB=0.981;AC=8;AF=0.143;AN=56;BaseQRankSum=1.236;DP=604;FS=86.707;HRun=2;HaplotypeScore=102.5850;InbreedingCoeff=0.6375;MQ=78.41;MQ0=1;MQRankSum=-1.268;QD=9.61;ReadPosRankSum=2.282;VQSLOD=-0.4823;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:28.47:0,28,185	0/0:12,0:12:11.70:0,12,87	0/0:23,0:20:51.74:0,52,365	0/0:17,0:17:28.55:0,29,235	0/1:26,0:26:0.43:0,0,76	0/0:32,0:32:44.91:0,45,266	0/0:10,0:10:14.03:0,14,65	0/0:24,0:24:24.18:0,24,126	0/0:18,0:18:19.18:0,19,92	0/0:29,1:30:17.09:0,17,227	0/0:22,0:22:27.85:0,28,181	0/0:26,0:26:5.23:0,5,123	0/0:24,0:24:17.80:0,18,138	0/0:21,0:21:12.19:0,12,107	0/0:20,0:19:41.56:0,42,255	0/0:24,0:24:67.92:0,68,447	0/0:22,0:22:26.08:0,26,181	0/1:24,1:25:18.64:19,0,152	0/0:23,0:23:42.30:0,42,226	0/0:31,0:31:15.78:0,16,138	0/0:15,0:15:7.78:0,8,52	0/0:19,0:19:8.82:0,9,132	0/0:16,0:16:2.35:0,2,78	0/0:23,0:23:25.04:0,25,120	0/0:25,0:25:19.25:0,19,112	1/1:19,1:21:53.97:471,54,0	1/1:31,1:31:71.60:607,72,0	1/1:10,0:10:17.95:144,18,0
chr10	23461481	.	GGT	G	2173.21	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=0.792;DP=604;FS=1.280;HRun=0;HaplotypeScore=110.3570;InbreedingCoeff=0.8632;MQ=77.88;MQ0=1;MQRankSum=-0.948;QD=18.11;ReadPosRankSum=2.933;VQSLOD=4.0179;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:13:24.28:91,24,0	0/0:12,0:12:32.71:0,33,260	0/0:21,1:19:50.87:0,51,442	0/0:17,0:17:32.18:0,32,275	0/0:27,0:27:49.57:0,50,478	0/0:32,0:32:63.17:0,63,627	0/0:10,0:10:26.82:0,27,196	0/0:23,0:23:56.33:0,56,429	0/0:18,0:18:50.70:0,51,392	0/0:28,0:28:51.20:0,51,496	0/0:22,0:22:52.48:0,52,450	0/0:26,0:26:68.52:0,69,552	0/0:23,0:23:62.32:0,62,494	0/0:21,0:21:41.75:0,42,343	1/1:20,0:19:7.42:70,7,0	0/1:24,0:24:45.58:46,0,68	0/0:22,0:22:50.31:0,50,400	0/0:25,0:25:54.94:0,55,440	0/0:24,0:24:65.69:0,66,530	0/0:33,0:33:65.39:0,65,592	0/0:15,0:15:26.86:0,27,213	0/0:19,0:19:54.55:0,55,457	0/0:16,0:16:47.52:0,48,343	0/0:23,0:23:56.59:0,57,408	0/0:26,0:26:54.95:0,55,428	1/1:3,18:21:38.52:792,39,0	1/1:1,31:31:71.28:1110,71,0	1/1:4,6:10:14.94:238,15,0
chr10	23461482	.	GT	G	7537.28	PASS	AB=0.972;AC=54;AF=0.964;AN=56;BaseQRankSum=-3.021;DP=603;FS=1.752;HRun=12;HaplotypeScore=80.2112;InbreedingCoeff=0.0287;MQ=77.90;MQ0=1;MQRankSum=-1.154;QD=12.50;ReadPosRankSum=4.443;VQSLOD=5.0735;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,0:13:11.33:54,11,0	1/1:2,9:11:23.78:185,24,0	0/1:22,0:19:30.14:30,0,97	0/1:16,1:17:9.68:10,0,85	1/1:2,25:27:65.57:499,66,0	1/1:5,24:32:10.96:421,11,0	1/1:2,8:10:20.91:163,21,0	1/1:4,19:24:60.02:446,60,0	1/1:3,15:18:41.83:325,42,0	1/1:7,19:28:60.64:437,61,0	1/1:4,16:22:18.67:305,19,0	1/1:4,22:26:29.31:411,29,0	1/1:4,19:23:23.35:364,23,0	1/1:3,18:21:5.40:225,5,0	1/1:1,0:19:28.52:83,29,0	1/1:4,0:24:38.69:112,39,0	1/1:6,14:21:30.32:233,30,0	1/1:8,16:25:46.74:346,47,0	1/1:6,18:24:29.82:347,30,0	1/1:3,29:33:76.01:553,76,0	1/1:1,13:15:28.93:215,29,0	1/1:2,16:18:10.49:269,10,0	1/1:3,13:16:38.84:302,39,0	1/1:4,19:23:44.81:348,45,0	1/1:3,22:26:55.76:417,56,0	1/1:20,1:21:41.32:164,41,0	1/1:33,0:32:59.95:228,60,0	1/1:10,0:10:12.39:46,12,0
chr10	23461811	.	G	GA	1455.55	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-8.338;DP=688;FS=5.265;HRun=8;HaplotypeScore=64.8134;InbreedingCoeff=0.9875;MQ=75.33;MQ0=0;MQRankSum=-0.887;QD=24.67;ReadPosRankSum=0.416;VQSLOD=4.4817;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:93.04:0,93,848	0/0:10,0:10:30.02:0,30,274	0/0:14,0:14:38.77:0,39,322	0/0:11,0:11:12:0,12,110	0/0:32,0:32:80.98:0,81,733	0/0:30,0:30:84.04:0,84,768	0/0:23,0:23:65.97:0,66,590	0/0:32,0:32:81.02:0,81,734	0/0:25,0:25:66.01:0,66,600	0/0:24,0:24:69.04:0,69,631	0/0:22,0:22:48.01:0,48,439	0/0:33,0:33:93.04:0,93,851	0/0:35,0:35:96.02:0,96,869	0/0:28,0:28:72.03:0,72,655	0/0:34,0:34:90.01:0,90,813	0/0:23,0:23:66.03:0,66,604	0/0:14,0:14:22.18:0,22,337	0/0:21,0:21:54.01:0,54,494	0/0:15,0:15:39.01:0,39,354	0/0:25,0:25:72.03:0,72,654	0/0:32,0:32:78.02:0,78,714	0/0:27,0:27:72.02:0,72,651	0/0:22,0:22:60.03:0,60,549	0/0:32,0:34:85.08:0,85,748	0/0:29,0:30:77.04:0,77,682	1/1:3,21:24:38.72:691,39,0	1/1:3,18:21:48.14:554,48,0	1/1:1,13:14:33.03:353,33,0
chr10	23462237	.	T	TA	10843.16	PASS	AB=0.615;AC=51;AF=0.911;AN=56;BaseQRankSum=-7.229;DP=623;FS=8.722;HRun=11;HaplotypeScore=63.8889;InbreedingCoeff=0.7397;MQ=74.44;MQ0=1;MQRankSum=-4.615;QD=18.22;ReadPosRankSum=4.196;VQSLOD=5.6821;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,0:30:37.05:190,37,0	1/1:0,6:6:18:172,18,0	0/0:14,0:14:29.81:0,30,224	0/0:12,1:14:15.13:0,15,92	1/1:6,18:26:33.18:366,33,0	1/1:6,21:27:54.11:548,54,0	1/1:4,15:19:36.96:367,37,0	1/1:8,18:26:54.09:541,54,0	1/1:4,11:15:9.83:281,10,0	1/1:11,18:29:33.81:513,34,0	0/1:9,15:24:59.78:281,0,60	1/1:4,25:30:63.08:628,63,0	1/1:2,21:23:21.85:403,22,0	1/1:4,11:15:21.04:213,21,0	1/1:4,22:26:51.09:512,51,0	1/1:5,23:28:63.13:640,63,0	1/1:2,22:24:60.12:609,60,0	1/1:1,19:20:42.08:426,42,0	1/1:9,17:26:30.85:482,31,0	1/1:7,22:30:39.76:515,40,0	1/1:3,8:11:24.05:244,24,0	1/1:4,11:16:23.88:227,24,0	1/1:3,25:28:45.52:447,46,0	1/1:7,31:38:34.83:715,35,0	1/1:5,14:19:33.07:335,33,0	1/1:4,21:25:51.57:519,52,0	1/1:4,23:27:16.65:532,17,0	1/1:0,5:6:14.86:136,15,0
chr10	23465855	.	C	CCTCT	3756.79	PASS	AB=0.944;AC=49;AF=0.942;AN=52;BaseQRankSum=-1.702;DP=678;FS=0.000;HRun=0;HaplotypeScore=187.4530;InbreedingCoeff=0.1685;MQ=59.90;MQ0=23;MQRankSum=0.889;QD=6.10;ReadPosRankSum=1.642;VQSLOD=2.3848;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:21:4:79,4,0	1/1:9,2:10:3.48:71,3,0	./.	./.	1/1:30,1:28:12.04:192,12,0	1/1:36,1:36:21.53:320,22,0	1/1:17,0:16:3:25,3,0	1/1:60,0:60:54.18:514,54,0	1/1:14,0:14:3.01:49,3,0	1/1:35,0:33:20.08:270,20,0	0/0:14,0:13:0:0,0,0	1/1:15,1:16:11.97:149,12,0	1/1:27,0:26:26.70:348,27,0	1/1:13,5:17:3.01:69,3,0	1/1:24,0:23:12.01:137,12,0	1/1:22,0:21:7.25:37,7,0	1/1:17,0:16:10.74:109,11,0	1/1:10,0:10:13.44:129,13,0	1/1:31,0:29:30.62:411,31,0	1/1:29,1:29:2.91:52,3,0	0/1:16,0:14:0:0,0,0	1/1:14,0:15:9.02:139,9,0	1/1:27,1:27:9.03:140,9,0	1/1:30,0:30:4.55:50,5,0	1/1:17,0:15:9.03:122,9,0	1/1:32,0:30:22.47:245,22,0	1/1:25,0:23:11.25:83,11,0	1/1:22,0:17:5.10:17,5,0
chr10	23465892	.	CTGTGTGTGTG	C	5639.86	PASS	AB=0.951;AC=35;AF=0.700;AN=50;BaseQRankSum=-4.967;DP=509;FS=13.553;HRun=0;HaplotypeScore=208.7488;InbreedingCoeff=-0.2096;MQ=34.37;MQ0=38;MQRankSum=2.548;QD=12.51;ReadPosRankSum=-5.781;VQSLOD=0.3647;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:6,0:5:3.01:0,3,43	./.	./.	1/1:23,0:20:17.86:391,18,0	0/1:33,0:30:99:204,0,132	1/1:15,0:14:11.93:220,12,0	1/1:39,7:45:20.92:450,21,0	1/1:16,0:11:3.01:73,3,0	0/1:18,0:16:99:353,0,116	1/1:13,0:13:2.99:78,3,0	0/1:18,0:18:20.40:428,0,20	0/1:28,0:27:99:636,0,157	0/1:22,0:20:17.96:433,0,18	1/1:13,1:20:12.04:178,12,0	1/1:7,0:12:21.07:449,21,0	0/1:14,0:12:48.40:255,0,48	0/1:8,0:8:96.69:137,0,97	0/1:23,0:19:42.70:43,0,273	1/1:15,0:15:11.95:214,12,0	1/1:17,0:12:4.67:152,5,0	0/1:17,0:18:78.15:183,0,78	1/1:19,1:18:2.97:23,3,0	0/0:30,0:26:5.81:0,6,77	0/1:24,0:18:43.58:69,0,44	1/1:10,0:12:12.04:290,12,0	0/1:8,1:16:17.48:211,0,17	1/1:8,3:5:6.02:170,6,0
chr10	23465918	.	G	GTTC	98.74	PASS	AB=0.929;AC=5;AF=0.089;AN=56;BaseQRankSum=3.361;DP=536;FS=6.966;HRun=0;HaplotypeScore=188.4949;InbreedingCoeff=-0.1058;MQ=53.97;MQ0=24;MQRankSum=-2.309;QD=1.06;ReadPosRankSum=-1.878;VQSLOD=1.6395;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:13:12.02:0,12,165	0/0:5,0:4:3.01:0,3,33	0/1:25,0:11:44.43:44,0,257	0/0:38,0:22:33.10:0,33,596	0/0:20,0:19:32.86:0,33,469	0/0:35,0:33:24.63:0,25,744	0/0:12,0:12:18.06:0,18,267	0/1:33,0:31:70.52:71,0,840	0/0:19,0:14:18.06:0,18,300	0/0:11,0:10:27.07:0,27,388	0/0:17,0:17:18.06:0,18,299	0/0:23,0:22:44.99:0,45,664	0/0:20,0:19:51.15:0,51,706	0/0:22,0:21:38.86:0,39,515	0/0:24,0:24:27.09:0,27,424	0/0:16,0:16:12.58:0,13,297	0/1:12,1:10:47.41:47,0,209	0/1:3,2:5:44.58:45,0,88	0/1:17,0:15:0.47:0,0,512	0/0:18,0:18:22.70:0,23,355	0/0:21,0:18:24.08:0,24,388	0/0:19,0:19:26.79:0,27,367	0/0:16,0:15:21.03:0,21,305	0/0:20,1:18:8.90:0,9,151	0/0:30,0:28:27.09:0,27,428	0/0:12,0:12:30.02:0,30,404	0/0:17,0:15:26.81:0,27,296	0/0:9,0:5:5.99:0,6,50
chr10	23465998	.	GTC	G	12528.84	PASS	AB=0.939;AC=45;AF=0.804;AN=56;BaseQRankSum=3.826;DP=770;FS=1.841;HRun=0;HaplotypeScore=122.5931;InbreedingCoeff=0.8405;MQ=66.51;MQ0=27;MQRankSum=0.314;QD=22.10;ReadPosRankSum=4.731;VQSLOD=5.3286;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:40.29:0,40,748	1/1:1,8:9:27.08:325,27,0	0/0:61,0:20:40.39:0,40,492	0/0:86,1:41:47.97:0,48,549	1/1:3,28:31:69.22:855,69,0	1/1:8,18:28:53.83:621,54,0	1/1:7,17:24:35.78:442,36,0	1/1:16,22:38:65.87:780,66,0	1/1:4,21:24:54.17:669,54,0	1/1:2,27:29:75.15:918,75,0	1/1:5,21:26:56.66:678,57,0	1/1:7,14:21:39.12:481,39,0	1/1:3,28:31:71.90:866,72,0	1/1:5,14:18:39.12:483,39,0	1/1:10,0:21:18.64:127,19,0	1/1:3,1:20:38.34:184,38,0	1/1:5,16:21:42.13:520,42,0	1/1:5,10:15:27.97:337,28,0	1/1:3,17:19:42.12:504,42,0	1/1:3,30:33:60.19:741,60,0	1/1:5,18:24:47.81:548,48,0	1/1:2,15:17:42.13:520,42,0	1/1:2,16:18:45.14:558,45,0	1/1:6,32:38:58.26:910,58,0	1/1:4,20:25:36.11:446,36,0	0/0:14,1:15:1.94:0,2,539	0/1:29,2:31:14.82:15,0,1124	0/0:15,0:15:42.13:0,42,663
chr10	23466774	.	AT	A	4137.16	PASS	AB=0.817;AC=44;AF=0.786;AN=56;BaseQRankSum=-1.494;DP=445;FS=12.735;HRun=11;HaplotypeScore=85.7471;InbreedingCoeff=0.4545;MQ=62.55;MQ0=6;MQRankSum=-0.996;QD=10.69;ReadPosRankSum=4.363;VQSLOD=1.5916;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:29:9.85:10,0,87	1/1:3,3:6:11.97:95,12,0	0/0:14,0:8:7.59:0,8,80	0/0:12,0:9:8.98:0,9,81	1/1:11,7:18:20.50:169,20,0	1/1:7,7:13:17.79:148,18,0	1/1:4,6:11:22.45:173,22,0	1/1:16,12:28:24.77:225,25,0	1/1:5,10:15:29.96:246,30,0	1/1:4,11:15:35.96:295,36,0	1/1:5,11:16:29.72:241,30,0	1/1:9,7:15:13.65:121,14,0	0/1:13,7:19:12.06:125,0,12	0/1:6,6:12:17.92:124,0,18	1/1:4,11:15:35.92:292,36,0	1/1:5,14:18:41.93:345,42,0	1/1:8,5:13:14.61:123,15,0	1/1:8,4:11:5.92:49,6,0	1/1:9,7:16:18.22:187,18,0	1/1:8,10:17:25.27:282,25,0	1/1:2,2:5:7.78:43,8,0	1/1:2,7:9:2.01:129,2,0	1/1:4,14:18:9.02:266,9,0	1/1:3,8:9:14.98:123,15,0	1/1:16,12:29:34.26:310,34,0	0/1:20,1:21:17.39:17,0,270	0/0:27,0:27:39:0,39,383	0/0:5,0:4:6.02:0,6,64
chr10	23466775	.	TTTTTTTTTTTGGTTC	T	901.12	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=1.992;DP=484;FS=15.830;HRun=0;HaplotypeScore=203.7987;InbreedingCoeff=0.7587;MQ=59.84;MQ0=8;MQRankSum=-4.405;QD=31.07;ReadPosRankSum=0.573;VQSLOD=1.9259;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:15,14:29:31.82:995,32,0	0/0:6,0:6:13.23:0,13,420	0/0:14,0:8:11.81:0,12,291	0/0:12,0:9:7.05:0,7,214	0/0:20,0:20:36.64:0,37,1138	0/0:16,0:15:32.94:0,33,1505	0/0:11,0:11:30.03:0,30,968	0/0:36,0:36:75.42:0,75,2911	0/0:15,0:15:33:0,33,1328	0/0:19,0:19:50.83:0,51,1709	0/0:20,0:20:39.50:0,39,1818	0/0:15,0:14:29.94:0,30,1124	0/0:22,0:21:35.95:0,36,1272	0/0:13,0:13:27.07:0,27,1261	0/0:15,0:15:36.78:0,37,1087	0/0:19,0:18:44.92:0,45,1334	0/0:14,0:14:26.94:0,27,1122	0/0:12,0:11:14.88:0,15,614	0/0:16,0:16:32.96:0,33,1190	0/0:19,0:18:44.17:0,44,1683	0/0:6,0:6:11.66:0,12,518	0/0:13,0:13:33.07:0,33,1491	0/0:23,0:22:50.26:0,50,2164	0/0:11,0:9:18.02:0,18,634	0/0:31,0:31:73.35:0,73,2682	0/0:23,0:23:58.62:0,59,2220	0/0:28,0:27:45.51:0,46,1888	0/0:6,0:4:5.89:0,6,225
chr10	23466785	.	TGGTTC	T	479.24	PASS	AB=0.946;AC=6;AF=0.107;AN=56;BaseQRankSum=3.898;DP=458;FS=11.856;HRun=0;HaplotypeScore=110.2101;InbreedingCoeff=0.1945;MQ=46.90;MQ0=15;MQRankSum=-2.952;QD=5.10;ReadPosRankSum=-1.506;VQSLOD=1.2806;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:18:30.10:474,30,0	0/0:5,0:5:6.36:0,6,161	0/0:10,0:4:10.74:0,11,132	0/0:8,0:5:6.37:0,6,81	0/1:18,1:20:63.64:64,0,417	0/0:17,0:16:17.62:0,18,416	0/0:10,0:10:22.47:0,22,311	0/1:31,1:32:8.84:9,0,874	0/0:12,0:12:33.11:0,33,508	0/0:23,0:22:15.22:0,15,741	0/0:22,1:23:2.53:0,3,636	0/0:12,0:11:30.03:0,30,418	0/0:19,0:16:31.32:0,31,410	0/0:14,0:13:27.04:0,27,355	0/0:15,0:15:35.36:0,35,401	0/0:17,0:16:44.86:0,45,414	0/1:13,1:14:2.53:3,0,372	0/1:9,0:8:51.33:51,0,187	0/0:14,0:13:4.92:0,5,333	0/0:20,0:19:32.48:0,32,540	0/0:8,0:7:11.84:0,12,136	0/0:15,0:15:34.58:0,35,465	0/0:23,0:22:50.61:0,51,812	0/0:10,0:8:18:0,18,235	0/0:29,0:28:59.91:0,60,965	0/0:23,0:23:41.87:0,42,722	0/0:30,0:29:52.63:0,53,776	0/0:7,0:4:9.03:0,9,170
chr10	23466790	.	CTTT	C	536.47	PASS	AB=0.751;AC=9;AF=0.161;AN=56;BaseQRankSum=3.529;DP=492;FS=2.134;HRun=16;HaplotypeScore=101.5582;InbreedingCoeff=0.5521;MQ=44.20;MQ0=17;MQRankSum=-0.076;QD=4.29;ReadPosRankSum=2.386;VQSLOD=-0.2841;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:31,0:31:98.11:98,0,150	0/0:5,0:5:9.03:0,9,139	0/0:6,0:3:2.13:0,2,5	0/0:8,0:5:3.48:0,3,43	0/0:24,0:24:38.19:0,38,446	0/0:15,0:17:36.08:0,36,524	0/0:9,0:10:21.04:0,21,278	0/0:39,0:38:71.75:0,72,940	0/0:12,0:12:21.07:0,21,345	0/0:16,0:21:38.80:0,39,574	0/0:23,0:25:53.66:0,54,780	0/0:13,0:12:21.02:0,21,298	0/0:17,0:16:27.09:0,27,393	0/0:14,0:13:24.03:0,24,327	0/1:4,0:15:1.52:24,0,2	1/1:5,0:16:3.77:25,4,0	0/0:16,0:15:29.72:0,30,363	0/0:11,0:10:18.94:0,19,250	0/0:16,0:14:33:0,33,448	0/0:18,0:19:45.15:0,45,688	0/0:6,0:7:17.03:0,17,214	0/0:14,0:15:33.07:0,33,504	0/0:24,0:24:45.11:0,45,662	0/0:10,0:6:9.03:0,9,141	0/0:28,0:27:54.13:0,54,806	0/1:12,11:23:9.23:301,0,9	1/1:17,12:28:14.14:159,14,0	1/1:8,1:7:11.72:74,12,0
chr10	23467512	.	T	TA	1029.66	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-3.286;DP=588;FS=0.000;HRun=8;HaplotypeScore=60.9204;InbreedingCoeff=0.8941;MQ=69.82;MQ0=3;MQRankSum=-0.176;QD=19.07;ReadPosRankSum=2.220;VQSLOD=3.3927;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,1:16:18.88:132,19,0	0/0:12,0:12:33.02:0,33,302	0/0:27,0:19:2.12:0,2,140	0/0:30,0:20:11.87:0,12,172	0/0:34,0:34:78.02:0,78,713	0/0:16,0:16:39.01:0,39,357	0/0:12,0:12:26.99:0,27,241	0/0:33,0:33:78.04:0,78,714	0/0:13,0:13:39.01:0,39,352	0/0:21,0:21:54.02:0,54,494	0/0:27,0:27:59.99:0,60,541	0/0:22,0:22:59.99:0,60,541	0/0:25,0:25:66.02:0,66,599	0/0:18,0:18:51.03:0,51,466	1/1:2,18:20:48.14:554,48,0	1/1:2,16:18:42.12:485,42,0	0/0:20,0:20:47.97:0,48,431	0/0:19,0:19:41.78:0,42,375	0/0:14,1:15:7.40:0,7,322	0/0:34,0:34:93.02:0,93,841	0/0:10,0:10:27.01:0,27,247	0/0:15,0:15:36.01:0,36,329	0/0:24,0:24:63.02:0,63,576	0/0:9,0:9:27.01:0,27,247	0/0:25,0:25:60:0,60,544	0/0:23,0:23:59.98:0,60,538	0/0:26,0:26:63.02:0,63,576	0/0:23,0:23:59.89:0,60,549
chr10	23468329	.	GTGCCCTAGTTCTC	G	24769.32	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=18.901;DP=708;FS=7.847;HRun=0;HaplotypeScore=270.0982;InbreedingCoeff=0.9966;MQ=69.64;MQ0=0;MQRankSum=-18.740;QD=68.61;ReadPosRankSum=-1.152;VQSLOD=3.2165;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:60,0:60:99:0,174,10234	1/1:1,11:12:30.10:1146,30,0	0/0:15,0:15:45.15:0,45,2302	0/0:22,0:22:54.18:0,54,2934	1/1:2,23:25:41.93:1535,42,0	1/1:4,21:25:48.16:1805,48,0	1/1:6,29:35:51.17:1934,51,0	1/1:7,17:24:56.99:1604,57,0	1/1:1,24:25:57.20:2199,57,0	1/1:4,15:19:45.05:1632,45,0	1/1:3,18:21:45.15:1599,45,0	1/1:5,20:25:51.17:1979,51,0	1/1:0,17:17:45.15:1714,45,0	1/1:1,24:25:54.19:2079,54,0	0/0:34,0:34:96.31:0,96,5503	0/0:34,0:34:99:0,102,6255	0/0:23,0:23:69.24:0,69,4372	0/0:16,0:16:45.15:0,45,2816	0/0:13,0:13:36.12:0,36,1769	0/0:30,0:30:90.31:0,90,5544	0/0:36,0:36:99:0,105,6542	1/1:4,19:24:48.16:1779,48,0	1/1:2,18:20:40.38:1429,40,0	1/1:9,30:38:18.06:624,18,0	1/1:3,22:25:45.15:1713,45,0	0/0:33,0:33:99:0,99,5996	0/0:26,0:26:75.26:0,75,4863	0/0:5,0:5:15.05:0,15,830
chr10	23468927	.	TG	T	16117.21	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=7.721;DP=645;FS=5.386;HRun=2;HaplotypeScore=66.9263;InbreedingCoeff=0.9966;MQ=91.21;MQ0=0;MQRankSum=-3.926;QD=35.98;ReadPosRankSum=4.218;VQSLOD=5.4139;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,120,1751	1/1:0,7:7:15.05:195,15,0	0/0:15,0:15:45.10:0,45,601	0/0:37,0:37:99:0,105,1410	1/1:0,23:23:69.22:896,69,0	1/1:0,18:18:42.14:545,42,0	1/1:0,22:22:60.20:779,60,0	1/1:2,25:27:78.25:1005,78,0	1/1:1,24:25:71.26:902,71,0	1/1:1,31:32:93.30:1206,93,0	1/1:0,29:29:87.28:1129,87,0	1/1:0,23:23:66.21:856,66,0	1/1:0,29:29:78.25:1013,78,0	1/1:0,26:26:69.22:896,69,0	0/0:30,0:30:90.28:0,90,1310	0/0:22,0:22:66.22:0,66,989	1/1:0,29:29:75.24:974,75,0	1/1:0,11:11:21.07:273,21,0	1/1:0,21:21:63.16:786,63,0	1/1:0,21:21:63.20:815,63,0	1/1:0,30:30:87.28:1130,87,0	1/1:0,16:16:48.15:615,48,0	1/1:1,26:27:72.23:935,72,0	1/1:0,13:13:36.12:467,36,0	1/1:0,19:19:54.18:701,54,0	0/0:17,0:17:51.16:0,51,747	0/0:24,0:23:72.24:0,72,1075	0/0:12,0:12:36.12:0,36,539
chr10	23468977	.	TCTACATATAACGTAAAAAAGTGTC	T	549.45	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.417;DP=585;FS=1.937;HRun=0;HaplotypeScore=355.4427;InbreedingCoeff=0.9545;MQ=75.94;MQ0=0;MQRankSum=-3.393;QD=22.89;ReadPosRankSum=0.355;VQSLOD=1.4928;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:7,17:24:12.04:635,12,0	0/0:12,0:12:33.11:0,33,3556	0/0:8,0:8:17.76:0,18,1028	0/0:15,0:15:36.12:0,36,2100	0/0:24,0:24:69.22:0,69,6908	0/0:16,0:16:42.14:0,42,4287	0/0:16,0:16:45.15:0,45,3468	0/0:38,0:38:90.30:0,90,6466	0/0:22,0:22:57.20:0,57,5500	0/0:33,0:33:93.31:0,93,8328	0/0:25,0:25:69.24:0,69,6458	0/0:17,0:17:48.16:0,48,4447	0/0:26,0:26:63.22:0,63,5394	0/0:24,0:24:60.21:0,60,5236	0/0:27,0:27:78.25:0,78,6982	0/0:10,0:10:30.10:0,30,2496	0/0:25,0:25:66.23:0,66,5819	0/0:21,0:21:57.20:0,57,5464	0/0:13,0:13:33.11:0,33,2981	0/0:39,0:39:99:0,102,9539	0/0:19,0:19:42.14:0,42,3581	0/0:21,0:21:63.22:0,63,5913	0/0:25,0:25:60.19:0,60,5806	0/0:7,0:7:21.07:0,21,2118	0/0:21,0:21:60.20:0,60,5766	0/0:20,0:19:54.19:0,54,5127	0/0:27,0:27:72.25:0,72,7237	0/0:10,0:10:30.10:0,30,2908
chr10	23469677	.	CA	C	16554.94	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=0.691;DP=668;FS=15.583;HRun=8;HaplotypeScore=88.1084;InbreedingCoeff=0.9951;MQ=76.52;MQ0=0;MQRankSum=-7.966;QD=26.03;ReadPosRankSum=5.943;VQSLOD=3.6123;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,24:25:66.11:637,66,0	1/1:0,7:7:18.03:174,18,0	0/0:17,0:17:35.89:0,36,394	0/0:15,0:15:28.61:0,29,308	1/1:0,32:32:90.14:869,90,0	1/1:5,34:39:99:956,99,0	1/1:1,14:15:39.06:377,39,0	1/1:4,26:30:78.10:742,78,0	1/1:2,22:24:66.11:637,66,0	1/1:2,30:32:87.14:840,87,0	1/1:1,32:33:93.15:898,93,0	1/1:1,21:22:63.10:608,63,0	1/1:1,21:22:60.09:579,60,0	1/1:0,28:28:75.12:724,75,0	1/1:3,28:31:84.13:811,84,0	1/1:2,28:30:84.13:811,84,0	1/1:0,16:16:45.07:435,45,0	1/1:2,12:14:33.05:318,33,0	1/1:0,29:29:87.13:835,87,0	1/1:2,26:28:75.12:724,75,0	1/1:0,13:13:39.06:377,39,0	1/1:1,21:22:57.09:550,57,0	1/1:3,31:34:87.14:840,87,0	1/1:1,25:26:72.12:695,72,0	1/1:0,26:26:72.12:695,72,0	1/1:1,20:21:60.09:580,60,0	1/1:3,21:24:53.99:521,54,0	1/1:2,11:13:33.05:319,33,0
chr10	23472206	.	AACACACACAC	A	2974.93	PASS	AB=0.931;AC=22;AF=0.423;AN=52;BaseQRankSum=5.323;DP=811;FS=0.000;HRun=0;HaplotypeScore=269.3730;InbreedingCoeff=0.3027;MQ=64.29;MQ0=12;MQRankSum=-7.090;QD=7.22;ReadPosRankSum=-0.232;VQSLOD=1.6645;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:60:48.16:0,48,1351	1/1:11,3:14:2.97:88,3,0	./.	./.	0/1:44,2:50:99:134,0,672	0/1:37,4:41:7:7,0,393	0/1:35,0:33:28.01:28,0,289	0/0:28,0:28:2.04:0,2,6	0/1:29,9:39:99:627,0,577	0/1:14,0:15:63.72:64,0,81	1/1:11,4:15:5.98:108,6,0	1/1:9,6:17:26.96:550,27,0	1/1:18,6:24:14.94:440,15,0	1/1:18,7:25:12.04:350,12,0	0/0:18,0:19:12.04:0,12,348	0/0:36,0:42:51.17:0,51,1257	0/1:40,2:42:99:165,0,122	0/0:11,0:11:10.27:0,10,203	0/0:27,0:26:13.86:0,14,530	0/0:32,0:32:20.08:0,20,529	0/0:52,0:50:29.80:0,30,921	1/1:20,0:20:2.87:88,3,0	0/1:19,0:19:0.04:144,0,0	0/1:30,1:30:77.08:77,0,88	1/1:17,6:24:16.65:281,17,0	0/0:15,0:14:18.68:0,19,428	0/0:38,0:36:48.16:0,48,1655	0/0:12,0:12:21.96:0,22,884
chr10	23472209	.	A	ACACG	7593.15	PASS	AB=0.947;AC=42;AF=0.750;AN=56;BaseQRankSum=-4.516;DP=834;FS=1.248;HRun=0;HaplotypeScore=205.9666;InbreedingCoeff=0.2208;MQ=60.89;MQ0=17;MQRankSum=2.202;QD=10.07;ReadPosRankSum=5.579;VQSLOD=4.1560;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:65,0:65:52.48:812,52,0	1/1:13,0:13:12.88:161,13,0	0/0:24,0:17:42.12:0,42,504	0/0:34,0:24:54.12:0,54,601	1/1:53,0:53:66.55:649,67,0	1/1:47,0:46:62.63:578,63,0	1/1:38,0:35:11.97:351,12,0	1/1:28,0:28:71.78:519,72,0	0/1:40,0:39:87.40:314,0,87	1/1:16,0:15:20.65:164,21,0	1/1:15,0:15:18.68:146,19,0	0/1:17,0:17:46.34:64,0,46	0/1:22,0:23:26.44:186,0,26	1/1:25,0:25:7.50:243,7,0	0/0:22,0:22:35.97:0,36,322	0/1:46,0:46:99:269,0,330	0/1:11,30:42:47.43:66,0,47	0/1:12,0:11:7.18:101,0,7	1/1:28,0:27:24.37:286,24,0	1/1:34,0:33:14:386,14,0	1/1:56,0:53:55.23:519,55,0	1/1:20,0:20:16.68:269,17,0	1/1:18,0:18:22.01:236,22,0	1/1:29,0:28:38.18:270,38,0	1/1:22,0:22:13.80:191,14,0	1/1:15,0:14:11.43:194,11,0	0/1:38,0:36:75.05:487,0,75	0/1:13,0:13:77.91:132,0,78
chr10	23472788	.	AT	A	1153.27	PASS	AB=0.683;AC=4;AF=0.071;AN=56;BaseQRankSum=9.343;DP=687;FS=3.260;HRun=8;HaplotypeScore=63.7550;InbreedingCoeff=0.3953;MQ=68.77;MQ0=0;MQRankSum=1.445;QD=11.89;ReadPosRankSum=1.300;VQSLOD=2.7659;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:78.24:0,78,940	0/0:8,0:8:24.03:0,24,264	0/0:13,0:10:4.56:0,5,73	0/0:10,0:8:8.33:0,8,45	0/0:65,0:65:99:0,183,2153	0/0:34,0:34:99:0,99,1174	0/0:18,0:18:54.13:0,54,618	0/0:27,0:27:66.17:0,66,759	0/0:16,0:16:45.10:0,45,527	0/0:25,0:25:75.16:0,75,888	0/0:42,0:42:99:0,117,1374	0/0:16,0:16:36.11:0,36,435	0/0:9,0:9:27.07:0,27,314	0/0:21,0:21:63.16:0,63,735	0/0:15,0:15:42.12:0,42,496	0/0:27,0:27:75.17:0,75,859	0/0:36,0:36:99:0,102,1164	0/0:21,0:21:57.15:0,57,673	0/0:29,0:29:78.13:0,78,860	0/0:47,1:48:97.39:0,97,1392	0/0:24,0:24:63.10:0,63,708	0/0:13,0:13:33.10:0,33,398	0/0:21,0:21:62.40:0,62,732	0/0:5,0:5:9.02:0,9,98	0/0:19,0:19:48.14:0,48,569	1/1:2,19:21:57.08:546,57,0	0/1:31,26:57:99:513,0,822	0/1:10,9:19:99:210,0,228
chr10	23473274	.	G	GA	10524.32	PASS	AB=0.706;AC=37;AF=0.661;AN=56;BaseQRankSum=-11.121;DP=786;FS=1.307;HRun=9;HaplotypeScore=119.7291;InbreedingCoeff=0.0054;MQ=78.30;MQ0=2;MQRankSum=-1.062;QD=14.86;ReadPosRankSum=1.473;VQSLOD=4.4667;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:13,14:28:99:280,0,215	0/1:1,7:8:5:178,0,5	0/1:36,0:30:4.03:4,0,191	0/0:27,0:21:21.25:0,21,210	0/1:28,30:58:99:803,0,370	0/1:28,18:46:99:324,0,471	0/1:14,13:28:99:303,0,172	1/1:6,25:31:78.10:829,78,0	0/1:19,10:29:99:187,0,391	1/1:4,24:28:69.18:757,69,0	1/1:4,16:20:45:456,45,0	1/1:1,14:15:33.09:365,33,0	1/1:6,28:34:40.82:786,41,0	1/1:5,18:23:28.09:538,28,0	0/0:17,0:17:47.67:0,48,401	0/0:34,0:34:89.60:0,90,757	0/1:22,11:33:99:248,0,374	1/1:3,10:14:17.88:180,18,0	0/1:23,10:34:99:254,0,333	0/1:35,28:63:99:651,0,626	0/1:7,7:15:99:174,0,113	1/1:0,17:17:48.09:515,48,0	1/1:0,11:11:30.08:329,30,0	1/1:3,18:21:45.12:498,45,0	1/1:3,18:21:45.12:498,45,0	1/1:3,19:22:31.10:571,31,0	0/1:27,27:54:99:535,0,470	0/1:9,9:18:42.06:263,0,42
chr10	23475005	.	ATT	A	1777.43	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-9.618;DP=634;FS=5.688;HRun=4;HaplotypeScore=126.3300;InbreedingCoeff=0.9989;MQ=83.22;MQ0=0;MQRankSum=-0.916;QD=33.54;ReadPosRankSum=2.233;VQSLOD=2.6111;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:57.20:0,57,1068	0/0:13,0:13:39.13:0,39,730	0/0:22,0:22:60.18:0,60,1018	0/0:16,0:16:48.16:0,48,826	0/0:21,0:21:63.16:0,63,1110	0/0:24,0:24:72.21:0,72,1225	0/0:22,0:22:66.22:0,66,1207	0/0:37,0:36:99:0,105,1873	0/0:18,0:18:54.18:0,54,982	0/0:29,0:29:81.27:0,81,1463	0/0:23,0:23:63.13:0,63,1101	0/0:23,0:23:69.19:0,69,1166	0/0:34,0:34:99:0,102,1782	0/0:24,0:24:69.22:0,69,1234	1/1:1,28:29:72.24:1060,72,0	1/1:1,23:24:57.19:839,57,0	0/0:16,0:16:48.16:0,48,892	0/0:22,0:22:63.22:0,63,1179	0/0:17,0:17:51.17:0,51,919	0/0:26,0:26:75.26:0,75,1399	0/0:27,0:27:81.28:0,81,1511	0/0:27,0:27:78.26:0,78,1430	0/0:29,0:29:81.21:0,81,1417	0/0:19,0:19:54.17:0,54,952	0/0:24,0:24:69.22:0,69,1262	0/0:19,0:19:54.19:0,54,1012	0/0:22,0:22:66.21:0,66,1201	0/0:8,0:8:24.08:0,24,449
chr10	23475244	.	TACACACAC	T	4580.43	PASS	AB=0.750;AC=37;AF=0.771;AN=48;BaseQRankSum=4.330;DP=473;FS=1.820;HRun=0;HaplotypeScore=151.3128;InbreedingCoeff=0.5790;MQ=58.37;MQ0=5;MQRankSum=-5.090;QD=14.09;ReadPosRankSum=0.942;VQSLOD=4.1914;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:20:5.05:0,5,111	1/1:11,2:13:3.01:75,3,0	./.	./.	1/1:12,2:14:3.01:75,3,0	1/1:15,1:19:9.01:156,9,0	1/1:13,3:17:9.03:206,9,0	./.	1/1:10,6:17:8.99:170,9,0	1/1:12,6:19:18.04:431,18,0	1/1:3,5:11:18.06:393,18,0	1/1:13,6:21:24.08:562,24,0	1/1:20,4:25:12.04:251,12,0	1/1:10,5:16:6.02:150,6,0	1/1:11,0:25:33.11:615,33,0	1/1:10,0:15:18.05:304,18,0	0/1:10,5:15:35.38:69,0,35	0/0:18,0:18:8.67:0,9,59	1/1:12,1:12:3.01:75,3,0	1/1:11,6:18:9.03:206,9,0	./.	1/1:5,7:12:12.04:300,12,0	1/1:10,4:16:9.03:187,9,0	1/1:16,4:21:9.03:206,9,0	1/1:16,2:16:6.02:150,6,0	0/0:17,0:17:30.98:0,31,916	0/0:17,0:19:30.10:0,30,985	0/0:5,0:5:3.48:0,3,114
chr10	23475907	.	AT	A	11916.78	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-0.724;DP=680;FS=4.447;HRun=8;HaplotypeScore=76.5896;InbreedingCoeff=0.9985;MQ=82.63;MQ0=0;MQRankSum=-2.126;QD=24.42;ReadPosRankSum=2.441;VQSLOD=5.8047;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:63.19:0,63,757	1/1:0,9:9:24.04:232,24,0	0/0:28,0:28:61.06:0,61,699	0/0:15,0:15:29.42:0,29,314	1/1:7,28:35:78.12:753,78,0	1/1:1,29:30:84.14:811,84,0	1/1:1,14:15:39.06:377,39,0	1/1:9,26:35:75.11:724,75,0	1/1:1,34:35:87.14:840,87,0	1/1:2,22:24:69.08:654,69,0	1/1:2,22:24:63.09:608,63,0	1/1:1,23:24:57.09:550,57,0	1/1:3,35:38:96.15:927,96,0	1/1:2,28:30:72.11:695,72,0	0/0:32,0:32:87.27:0,87,1050	0/0:26,0:26:72.21:0,72,859	1/1:2,18:20:36.05:348,36,0	1/1:1,21:22:60.10:579,60,0	1/1:4,15:19:45.05:429,45,0	1/1:2,28:30:81.13:782,81,0	1/1:0,17:17:42.07:406,42,0	1/1:1,15:16:45.07:434,45,0	1/1:0,26:26:75.12:724,75,0	1/1:0,11:11:30.05:290,30,0	1/1:0,28:28:78.12:753,78,0	0/0:33,0:33:90.23:0,90,1070	0/0:27,3:30:26.32:0,26,882	0/0:7,0:7:21.06:0,21,253
chr10	23476084	.	CTGTGTGTGAGTG	C	30173.09	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=9.922;DP=681;FS=8.184;HRun=0;HaplotypeScore=323.8820;InbreedingCoeff=0.9515;MQ=61.06;MQ0=2;MQRankSum=-10.445;QD=54.56;ReadPosRankSum=3.560;VQSLOD=3.0605;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,11:17:15.05:535,15,0	1/1:1,10:11:24.08:856,24,0	0/0:32,0:22:44.27:0,44,1274	0/0:32,0:28:40.24:0,40,2382	1/1:7,21:28:54.08:1449,54,0	1/1:12,22:34:60.11:1843,60,0	1/1:4,7:11:18.01:474,18,0	1/1:23,10:33:70.67:1436,71,0	1/1:6,11:17:36.06:1052,36,0	1/1:15,18:33:68.93:2139,69,0	1/1:6,20:27:36.10:1121,36,0	1/1:11,22:33:69.21:2170,69,0	1/1:8,14:22:45.06:1325,45,0	1/1:6,17:23:54.16:1727,54,0	0/0:32,0:32:75.26:0,75,4357	0/0:32,0:32:84.29:0,84,4903	1/1:3,6:9:14.88:425,15,0	1/1:6,5:11:13.18:532,13,0	1/1:14,7:21:41.16:864,41,0	1/1:14,24:38:63.17:2160,63,0	1/1:12,7:19:5.99:49,6,0	1/1:9,21:30:51.14:1574,51,0	1/1:9,23:32:51.15:1655,51,0	1/1:7,13:20:21.07:730,21,0	1/1:3,14:17:39.12:1241,39,0	1/1:12,18:30:79.96:2232,80,0	1/1:8,19:27:57.14:1835,57,0	1/1:4,6:10:21.07:749,21,0
chr10	23476124	.	ATG	A	18184.99	PASS	AB=1.000;AC=49;AF=0.875;AN=56;BaseQRankSum=10.911;DP=772;FS=4.697;HRun=0;HaplotypeScore=300.5584;InbreedingCoeff=0.8496;MQ=53.96;MQ0=3;MQRankSum=-8.092;QD=27.10;ReadPosRankSum=2.024;VQSLOD=4.7825;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,15:19:30.10:405,30,0	1/1:0,13:13:33.11:446,33,0	0/1:24,0:16:4.17:4,0,393	0/0:29,0:19:9.64:0,10,245	1/1:3,32:35:54.18:730,54,0	1/1:4,32:36:81.27:1092,81,0	1/1:2,21:23:42.14:568,42,0	1/1:10,34:44:99:1378,102,0	1/1:2,21:22:48.16:646,48,0	1/1:3,30:33:90.30:1217,90,0	1/1:9,27:36:60.20:811,60,0	1/1:2,34:36:90.30:1217,90,0	1/1:3,28:31:69.23:933,69,0	1/1:1,21:22:57.19:770,57,0	0/0:31,0:31:93.32:0,93,1630	0/0:39,0:39:99:0,102,1721	1/1:1,9:10:15.05:203,15,0	1/1:3,12:15:33.11:446,33,0	1/1:1,25:26:75.25:1012,75,0	1/1:4,31:35:78.24:1054,78,0	1/1:6,14:20:9.50:122,10,0	1/1:3,25:28:51.08:637,51,0	1/1:7,26:33:60.16:790,60,0	1/1:3,20:23:33.11:446,33,0	1/1:3,27:30:57.15:750,57,0	1/1:1,28:29:84.28:1136,84,0	1/1:4,33:37:75.25:1014,75,0	1/1:0,10:10:27.09:359,27,0
chr10	23476719	.	G	GAACCGTTTTTTT	873.35	PASS	AB=0.667;AC=21;AF=0.955;AN=22;BaseQRankSum=-1.349;DP=23;FS=7.782;HRun=0;HaplotypeScore=22.9818;InbreedingCoeff=-0.1957;MQ=156.10;MQ0=0;MQRankSum=-0.964;QD=39.70;ReadPosRankSum=-1.349;VQSLOD=1.0576;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	./.	1/1:1,1:2:6:221,6,0	0/1:3,0:6:17.44:188,0,17	./.	1/1:1,0:1:3.01:50,3,0	./.	1/1:2,0:2:3:27,3,0	./.	./.	./.	1/1:1,0:2:6.02:92,6,0	./.	./.	./.	./.	./.	1/1:1,0:2:6.02:90,6,0	1/1:1,0:1:3:27,3,0	1/1:2,0:2:6.02:105,6,0	./.	1/1:1,0:1:3:25,3,0	./.	./.	1/1:2,0:2:6.02:102,6,0	1/1:1,0:1:3:27,3,0	./.	./.
chr10	23477359	.	GC	G	446.40	PASS	AC=2;AF=0.038;AN=52;BaseQRankSum=2.711;DP=279;FS=5.229;HRun=5;HaplotypeScore=39.2956;InbreedingCoeff=0.7282;MQ=48.94;MQ0=31;MQRankSum=-1.689;QD=26.26;ReadPosRankSum=-0.206;VQSLOD=2.4146;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,16:17:48.13:540,48,0	0/0:7,0:6:15.05:0,15,202	./.	./.	0/0:13,0:13:33.11:0,33,441	0/0:6,0:6:15.05:0,15,205	0/0:11,0:10:21.03:0,21,266	0/0:19,0:10:26.96:0,27,306	0/0:11,0:10:30.07:0,30,386	0/0:8,0:7:21.06:0,21,270	0/0:11,0:11:24.08:0,24,320	0/0:10,0:10:24.08:0,24,327	0/0:12,0:12:27.09:0,27,368	0/0:12,0:12:36.12:0,36,492	0/0:9,0:9:27.09:0,27,369	0/0:6,0:5:15.05:0,15,205	0/0:17,0:17:48.16:0,48,654	0/0:11,0:11:27.09:0,27,369	0/0:8,0:3:9.03:0,9,123	0/0:12,0:12:36.12:0,36,492	0/0:3,0:3:2.52:0,3,40	0/0:7,0:7:21.06:0,21,272	0/0:12,0:12:27.09:0,27,369	0/0:7,0:7:21.06:0,21,271	0/0:11,0:10:30.06:0,30,389	0/0:8,0:8:21.07:0,21,278	0/0:6,0:6:18.06:0,18,246	0/0:4,0:4:12.04:0,12,163
chr10	23477817	.	TATATATATATATACATATATATATCC	T	847.61	PASS	AC=16;AF=0.889;AN=18;BaseQRankSum=-1.470;DP=41;FS=0.000;HRun=0;HaplotypeScore=27.9508;MQ=44.68;MQ0=3;MQRankSum=-0.134;QD=30.27;ReadPosRankSum=1.470;VQSLOD=1.0571;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	1/1:1,0:1:3.01:71,3,0	./.	0/0:9,0:1:3.01:0,3,74	./.	./.	./.	1/1:6,0:6:15.05:296,15,0	1/1:1,0:1:3.01:71,3,0	./.	1/1:1,0:1:3.01:71,3,0	./.	./.	./.	./.	./.	1/1:1,13:14:2.74:213,3,0	1/1:3,0:3:3.01:58,3,0	1/1:1,0:1:3.01:76,3,0	./.	./.	1/1:1,0:1:3.01:71,3,0	./.	./.	./.	./.	./.	./.
chr10	23477841	.	TCC	T	2084.91	PASS	AB=0.500;AC=31;AF=0.738;AN=42;BaseQRankSum=-2.314;DP=121;FS=12.619;HRun=2;HaplotypeScore=23.1792;InbreedingCoeff=0.4724;MQ=61.09;MQ0=6;MQRankSum=-0.122;QD=26.06;ReadPosRankSum=1.007;VQSLOD=0.6535;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	1/1:3,0:3:9.03:139,9,0	0/0:9,0:3:9.03:0,9,172	0/0:13,0:2:2.91:0,3,59	1/1:3,0:3:9.03:137,9,0	./.	1/1:2,0:2:6.02:92,6,0	1/1:0,23:23:66.19:919,66,0	1/1:1,0:1:3.01:46,3,0	1/1:3,0:3:9.03:144,9,0	1/1:1,0:1:3.01:46,3,0	./.	0/0:0,5:5:0:0,0,0	1/1:1,0:1:3.01:46,3,0	0/0:3,0:3:9.03:0,9,156	0/0:1,0:1:3.01:0,3,51	1/1:13,0:13:2.98:22,3,0	1/1:0,12:12:6.02:77,6,0	1/1:3,0:3:9.03:141,9,0	./.	./.	1/1:3,0:3:6.02:92,6,0	0/1:0,5:5:0.15:0,0,0	1/1:1,0:1:3.01:45,3,0	1/1:4,0:4:12.03:167,12,0	1/1:2,0:2:6.02:95,6,0	./.	./.
chr10	23478577	.	TATAAA	T	5141.29	PASS	AB=0.862;AC=23;AF=0.411;AN=56;BaseQRankSum=2.604;DP=601;FS=21.185;HRun=0;HaplotypeScore=328.9579;InbreedingCoeff=-0.6998;MQ=69.29;MQ0=0;MQRankSum=-6.214;QD=10.12;ReadPosRankSum=-6.694;VQSLOD=1.3855;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:14,0:14:25.14:25,0,364	0/1:10,0:10:16.10:16,0,322	0/0:20,0:20:60.21:0,60,1721	0/0:15,0:15:42.10:0,42,1258	0/1:26,8:34:99:325,0,637	0/1:22,4:25:99:209,0,740	0/1:13,5:18:99:255,0,344	0/1:19,10:29:99:585,0,600	0/1:19,1:20:79.56:80,0,678	0/1:22,7:29:99:376,0,817	0/1:24,8:32:99:398,0,738	0/1:18,5:23:99:264,0,648	0/1:12,3:15:99:156,0,405	0/1:17,1:18:15.35:15,0,599	0/0:27,0:27:75.26:0,75,2370	0/0:24,0:24:72.25:0,72,2279	0/1:11,2:13:99:162,0,296	0/1:4,1:5:87.34:87,0,116	0/1:12,1:13:27.46:27,0,488	0/1:25,4:28:99:182,0,923	0/1:5,3:8:51.46:51,0,146	0/1:19,4:23:99:197,0,705	0/1:28,7:35:99:434,0,850	0/0:6,1:7:9.03:0,9,135	0/1:28,6:34:99:507,0,895	0/1:23,10:33:99:567,0,860	0/1:33,3:36:99:163,0,1190	0/1:11,0:11:59.89:60,0,304
chr10	23478581	.	A	AT	9380.26	PASS	AB=0.933;AC=47;AF=0.839;AN=56;BaseQRankSum=13.874;DP=443;FS=2.111;HRun=0;HaplotypeScore=270.9949;InbreedingCoeff=0.7349;MQ=79.58;MQ0=0;MQRankSum=-10.418;QD=26.50;ReadPosRankSum=7.115;VQSLOD=3.8474;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,7:8:21.06:260,21,0	1/1:3,5:8:24.03:278,24,0	0/0:20,0:20:56.95:0,57,725	0/0:17,0:16:44.84:0,45,549	1/1:9,17:26:34.78:627,35,0	1/1:5,12:17:19.84:488,20,0	1/1:5,4:9:4.49:160,4,0	0/1:13,1:14:8.87:96,0,9	1/1:2,11:14:37.05:486,37,0	1/1:9,13:22:31.09:580,31,0	1/1:9,12:21:10.94:484,11,0	1/1:5,10:15:19.32:388,19,0	1/1:3,5:8:8.33:192,8,0	1/1:1,11:12:30.84:450,31,0	0/0:29,0:29:84.24:0,84,1099	0/0:23,0:23:69.23:0,69,965	1/1:3,4:8:7.53:142,8,0	1/1:3,2:5:7.44:96,7,0	1/1:2,7:9:22.30:310,22,0	1/1:6,13:20:36.71:575,37,0	1/1:3,2:5:3.74:77,4,0	1/1:6,12:18:27.62:497,28,0	1/1:9,18:28:50.19:704,50,0	1/1:1,2:3:6.02:85,6,0	1/1:9,17:26:47.67:733,48,0	1/1:10,13:23:17.84:495,18,0	1/1:7,19:26:57.70:844,58,0	1/1:1,8:9:24.08:333,24,0
chr10	23478586	.	A	ATGGAAATAATT	45813.08	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=13.155;DP=413;FS=20.243;HRun=0;HaplotypeScore=201.1117;InbreedingCoeff=0.9151;MQ=76.39;MQ0=0;MQRankSum=-12.836;QD=137.58;ReadPosRankSum=3.703;VQSLOD=4.0321;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,7:7:21.07:1169,21,0	1/1:1,5:6:18.06:911,18,0	0/0:18,0:18:54.19:0,54,1777	0/0:15,0:14:33.55:0,34,956	1/1:8,16:24:69.24:3117,69,0	1/1:9,11:20:60.21:2508,60,0	1/1:7,1:8:24.07:746,24,0	1/1:11,0:11:33.11:1103,33,0	1/1:1,11:13:39.13:2160,39,0	1/1:8,12:20:60.21:2834,60,0	1/1:10,10:20:60.21:2610,60,0	1/1:5,10:15:45.15:2232,45,0	1/1:3,5:8:24.08:1167,24,0	1/1:2,10:12:36.10:1829,36,0	0/0:26,0:26:72.25:0,72,2604	0/0:21,0:21:63.20:0,63,2262	1/1:3,4:8:18.06:888,18,0	1/1:2,1:3:6.02:279,6,0	1/1:1,7:8:24.08:1308,24,0	1/1:5,13:19:57.20:2867,57,0	1/1:4,2:6:15.05:517,15,0	1/1:6,12:18:54.18:2577,54,0	1/1:9,16:25:75.26:3365,75,0	1/1:1,1:2:3.01:171,3,0	1/1:7,17:24:69.24:3529,69,0	1/1:12,12:24:69.23:3144,69,0	1/1:5,17:23:66.23:3402,66,0	1/1:1,8:9:24.08:1378,24,0
chr10	23479565	.	ATAT	A	972.65	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.684;DP=636;FS=5.605;HRun=0;HaplotypeScore=88.7681;InbreedingCoeff=0.9890;MQ=76.88;MQ0=0;MQRankSum=-2.913;QD=33.54;ReadPosRankSum=1.475;VQSLOD=4.1884;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,28:29:66.17:1068,66,0	0/0:8,0:8:24.07:0,24,502	0/0:12,0:12:30.08:0,30,530	0/0:14,0:14:30.10:0,30,617	0/0:36,0:36:99:0,105,2373	0/0:22,0:22:66.23:0,66,1476	0/0:14,0:14:42.11:0,42,826	0/0:29,0:29:72.23:0,72,1508	0/0:16,0:16:48.14:0,48,984	0/0:27,0:27:81.26:0,81,1699	0/0:25,0:25:72.23:0,72,1579	0/0:26,0:26:66.20:0,66,1409	0/0:33,0:33:93.31:0,93,2063	0/0:27,0:27:81.23:0,81,1701	0/0:45,0:45:99:0,129,2726	0/0:20,0:20:57.17:0,57,1205	0/0:16,0:16:48.14:0,48,1022	0/0:6,0:6:18.06:0,18,407	0/0:24,0:24:60.21:0,60,1346	0/0:21,0:21:63.22:0,63,1409	0/0:20,0:20:54.19:0,54,1223	0/0:21,0:21:60.19:0,60,1280	0/0:25,0:25:66.17:0,66,1429	0/0:30,0:30:90.30:0,90,1995	0/0:17,0:17:51.18:0,51,1137	0/0:29,0:29:87.29:0,87,1912	0/0:28,0:28:81.25:0,81,1733	0/0:16,0:16:48.14:0,48,981
chr10	23479899	.	G	GT	7732.94	PASS	AB=0.578;AC=40;AF=0.714;AN=56;BaseQRankSum=-10.497;DP=550;FS=0.000;HRun=11;HaplotypeScore=67.0879;InbreedingCoeff=0.6523;MQ=78.01;MQ0=0;MQRankSum=-2.367;QD=17.78;ReadPosRankSum=-0.420;VQSLOD=5.5002;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,15:16:27.05:274,27,0	0/1:3,3:10:28.76:72,0,29	0/0:11,0:12:10.02:0,10,82	0/0:16,0:16:14.12:0,14,89	1/1:7,21:30:25.36:580,25,0	1/1:3,18:21:30.87:495,31,0	0/1:8,16:24:4.39:323,0,4	1/1:9,25:35:28.47:617,28,0	1/1:5,13:18:9.82:276,10,0	1/1:4,17:21:51.04:490,51,0	1/1:5,19:24:7.60:430,8,0	0/1:3,12:15:4.39:323,0,4	0/0:19,0:19:41.80:0,42,325	1/1:4,25:29:42.92:616,43,0	1/1:3,16:20:41.91:406,42,0	1/1:3,23:26:60.12:609,60,0	1/1:3,1:17:22.73:114,23,0	1/1:4,2:22:45.90:265,46,0	1/1:8,2:18:25.96:148,26,0	1/1:2,1:17:40.31:232,40,0	1/1:2,0:7:14.20:71,14,0	1/1:1,11:13:38.91:378,39,0	0/1:4,13:17:29.37:267,0,29	1/1:1,12:13:30.06:305,30,0	1/1:3,18:22:44.92:441,45,0	0/0:4,1:28:18.90:0,19,103	0/0:7,0:30:43.65:0,44,140	0/0:0,0:10:18.33:0,18,53
chr10	23481665	.	A	AT	977.05	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-8.409;DP=540;FS=13.615;HRun=7;HaplotypeScore=50.1080;InbreedingCoeff=0.9619;MQ=69.95;MQ0=0;MQRankSum=0.076;QD=26.41;ReadPosRankSum=0.865;VQSLOD=3.0122;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:36.01:0,36,339	0/0:11,0:11:30.04:0,30,290	0/0:9,0:9:16.67:0,17,182	0/0:7,0:7:12.52:0,13,89	0/0:33,0:33:87.12:0,87,834	0/0:25,0:25:69.11:0,69,666	0/0:14,0:14:39.06:0,39,377	0/0:29,0:29:72.10:0,72,692	0/0:24,0:24:65.98:0,66,615	0/0:26,0:26:66.08:0,66,628	0/0:29,0:29:84.13:0,84,811	0/0:20,0:20:60.08:0,60,571	0/0:21,0:21:60.07:0,60,571	0/0:14,0:14:36.06:0,36,348	1/1:0,19:19:54.17:652,54,0	1/1:2,16:18:13.19:442,13,0	0/0:18,0:18:54.07:0,54,514	0/0:10,0:10:21.03:0,21,202	0/0:13,0:13:36.06:0,36,348	0/0:35,0:35:99:0,105,1014	0/0:8,0:8:21.02:0,21,196	0/0:16,0:16:48.07:0,48,459	0/0:27,0:27:75.12:0,75,724	0/0:9,0:9:24.04:0,24,232	0/0:29,0:29:78.12:0,78,753	0/0:17,0:18:53.09:0,53,486	0/0:32,0:32:87.12:0,87,834	0/0:12,0:12:27.04:0,27,261
chr10	23481757	.	GA	G	12817.02	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=8.483;DP=578;FS=1.526;HRun=8;HaplotypeScore=94.2685;InbreedingCoeff=0.9853;MQ=65.87;MQ0=0;MQRankSum=-4.755;QD=25.84;ReadPosRankSum=1.392;VQSLOD=5.2025;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,13:19:13.44:340,13,0	1/1:1,6:8:20.06:180,20,0	0/0:14,0:14:36.09:0,36,413	0/0:5,0:4:12.04:0,12,144	1/1:3,25:28:75.10:718,75,0	1/1:2,23:25:75.12:723,75,0	1/1:3,18:21:60.08:574,60,0	1/1:1,36:37:99:1042,108,0	1/1:3,22:25:66.10:637,66,0	1/1:4,26:29:75.12:724,75,0	1/1:2,23:25:69.11:664,69,0	1/1:2,20:22:60.08:573,60,0	1/1:2,22:24:69.10:663,69,0	1/1:1,15:16:48.06:457,48,0	1/1:3,13:16:42.06:400,42,0	1/1:6,13:19:51.07:486,51,0	1/1:3,20:23:66.05:627,66,0	1/1:2,16:17:42.07:405,42,0	1/1:5,12:17:45.07:434,45,0	1/1:6,40:46:99:1230,129,0	1/1:1,7:8:21.03:203,21,0	1/1:2,13:15:39.06:376,39,0	1/1:1,15:16:45.07:434,45,0	1/1:3,11:14:33.05:318,33,0	1/1:3,21:23:63.10:607,63,0	0/0:23,0:23:63.14:0,63,744	0/0:26,0:25:69.19:0,69,818	0/0:14,0:14:42.11:0,42,493
chr10	23481811	.	TC	T	15735.92	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=13.284;DP=689;FS=3.313;HRun=4;HaplotypeScore=136.8513;InbreedingCoeff=0.9967;MQ=80.74;MQ0=0;MQRankSum=-7.184;QD=31.79;ReadPosRankSum=1.323;VQSLOD=3.2451;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,1:20:15.84:0,16,635	1/1:1,8:9:21.06:251,21,0	0/0:28,0:28:42.46:0,42,890	0/0:24,0:23:57.17:0,57,752	1/1:2,34:36:84.26:1006,84,0	1/1:2,29:31:84.26:1006,84,0	1/1:1,17:18:45.14:540,45,0	1/1:4,32:36:96.26:1117,96,0	1/1:0,30:30:87.27:1042,87,0	1/1:3,38:41:99:1279,108,0	1/1:1,29:30:69.21:826,69,0	1/1:1,30:31:90.28:1078,90,0	1/1:1,26:27:72.18:845,72,0	1/1:2,14:16:39.12:467,39,0	0/0:21,0:21:63.20:0,63,865	0/0:21,0:21:63.19:0,63,849	1/1:1,23:24:63.19:753,63,0	1/1:1,7:8:24.07:285,24,0	1/1:2,11:13:36.11:431,36,0	1/1:2,43:45:99:1471,123,0	1/1:0,15:15:42.13:503,42,0	1/1:1,21:22:66.20:790,66,0	1/1:1,22:23:63.19:751,63,0	1/1:1,17:18:45.14:539,45,0	1/1:1,21:22:63.19:754,63,0	0/0:30,0:30:84.27:0,84,1162	0/0:37,0:37:99:0,105,1469	0/0:13,0:13:39.13:0,39,543
chr10	23481918	.	A	AT	4220.14	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-12.980;DP=712;FS=0.000;HRun=8;HaplotypeScore=67.7597;InbreedingCoeff=0.9992;MQ=79.72;MQ0=0;MQRankSum=-0.218;QD=28.13;ReadPosRankSum=2.180;VQSLOD=5.2269;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,21:25:54.08:593,54,0	0/0:9,0:9:27.01:0,27,247	0/0:22,0:21:39.01:0,39,353	0/0:16,0:16:35.99:0,36,326	0/0:38,0:39:99:0,104,926	0/0:21,0:21:54.02:0,54,493	0/0:17,0:17:41.99:0,42,379	0/0:30,0:30:69:0,69,625	0/0:29,0:29:78.03:0,78,714	0/0:33,0:33:84.04:0,84,768	0/0:34,0:34:80.98:0,81,731	0/0:31,0:31:84.02:0,84,764	0/0:39,0:39:99:0,105,949	0/0:24,0:24:69.01:0,69,623	1/1:4,30:34:78.23:900,78,0	1/1:5,22:27:54.16:623,54,0	0/0:27,0:27:78.02:0,78,707	0/0:15,0:14:30:0,30,275	0/0:21,0:21:48:0,48,436	0/0:21,0:21:54.02:0,54,494	0/0:40,0:40:99:0,102,922	0/0:19,0:19:57.02:0,57,516	0/0:24,0:24:57.02:0,57,522	0/0:24,0:24:60.02:0,60,549	0/0:27,0:27:75.03:0,75,686	1/1:0,25:25:72.21:831,72,0	1/1:0,29:30:87.25:995,87,0	1/1:0,9:9:24.07:277,24,0
chr10	23482119	.	G	GTC	28007.57	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-13.299;DP=753;FS=0.380;HRun=0;HaplotypeScore=75.3150;InbreedingCoeff=0.9990;MQ=85.83;MQ0=2;MQRankSum=-6.397;QD=44.18;ReadPosRankSum=3.215;VQSLOD=6.6350;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,36:36:99:1756,99,0	1/1:0,13:13:36.12:638,36,0	0/0:31,0:31:78.24:0,78,1040	0/0:21,0:21:48.11:0,48,637	1/1:2,33:35:84.29:1489,84,0	1/1:1,14:17:36.12:604,36,0	1/1:1,18:21:51.17:896,51,0	1/1:3,30:32:81.20:1261,81,0	1/1:3,27:30:69.24:1211,69,0	1/1:1,37:40:99:2002,117,0	1/1:1,31:31:78.27:1381,78,0	1/1:3,24:27:63.22:1117,63,0	1/1:1,38:39:93.32:1649,93,0	1/1:3,29:32:81.28:1436,81,0	1/1:1,25:27:78.27:1379,78,0	1/1:0,31:32:87.30:1543,87,0	1/1:2,22:24:57.20:1010,57,0	1/1:0,8:8:21.07:372,21,0	1/1:3,25:29:81.25:1369,81,0	1/1:2,38:40:90.31:1592,90,0	1/1:0,19:19:48.16:851,48,0	1/1:1,16:17:39.13:692,39,0	1/1:1,27:30:78.27:1369,78,0	1/1:0,25:24:60.21:1064,60,0	1/1:1,26:26:75.26:1329,75,0	0/0:19,0:19:54.18:0,54,741	0/0:34,0:34:99:0,102,1400	0/0:14,0:14:42.11:0,42,557
chr10	23485747	.	TA	T	339.63	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-4.405;DP=569;FS=0.000;HRun=8;HaplotypeScore=92.9038;InbreedingCoeff=0.9858;MQ=75.86;MQ0=1;MQRankSum=-0.084;QD=21.23;ReadPosRankSum=0.162;VQSLOD=3.2552;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,15:16:45.07:434,45,0	0/0:8,0:8:18.06:0,18,216	0/0:11,0:12:28.63:0,29,353	0/0:13,1:13:30.13:0,30,319	0/0:23,0:23:57.16:0,57,671	0/0:28,0:28:78.24:0,78,935	0/0:21,0:21:63.15:0,63,740	0/0:33,0:33:90.27:0,90,1070	0/0:22,0:22:60.17:0,60,709	0/0:27,0:27:78.19:0,78,891	0/0:20,0:20:51.15:0,51,612	0/0:17,0:17:51.16:0,51,612	0/0:23,0:23:66.20:0,66,783	0/0:15,0:15:39.12:0,39,469	0/0:32,0:32:90.26:0,90,1065	0/0:23,0:23:66.18:0,66,779	0/0:20,0:20:51.14:0,51,592	0/0:9,0:9:20.80:0,21,227	0/0:19,0:19:45.12:0,45,523	0/0:21,0:21:60.13:0,60,693	0/0:13,0:12:36.10:0,36,421	0/0:21,0:21:57.17:0,57,682	0/0:24,0:25:66.05:0,66,749	0/0:12,0:12:30.09:0,30,361	0/0:21,0:21:60.11:0,60,679	0/0:30,1:31:64.28:0,64,1036	0/0:31,0:31:90.26:0,90,1072	0/0:12,0:12:36.10:0,36,424
chr10	23486404	.	GTT	G	8622.97	PASS	AB=0.966;AC=47;AF=0.839;AN=56;BaseQRankSum=7.992;DP=617;FS=1.274;HRun=15;HaplotypeScore=220.3017;InbreedingCoeff=0.8373;MQ=50.64;MQ0=16;MQRankSum=-7.751;QD=16.78;ReadPosRankSum=3.891;VQSLOD=1.7105;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,21:29:58.24:536,58,0	1/1:2,6:8:17.95:158,18,0	0/0:56,0:10:10.07:0,10,101	0/1:53,2:18:10.87:11,0,165	1/1:9,20:29:56.68:494,57,0	1/1:3,20:23:62.85:549,63,0	1/1:8,10:17:32.57:282,33,0	1/1:11,9:20:30.05:261,30,0	1/1:4,10:14:29.90:263,30,0	1/1:5,19:24:56.69:489,57,0	1/1:4,20:24:59.82:521,60,0	1/1:3,18:21:56.96:495,57,0	1/1:3,15:18:44.88:392,45,0	1/1:4,16:20:47.88:420,48,0	1/1:6,17:23:51.28:444,51,0	1/1:7,12:19:41.53:344,42,0	1/1:8,9:17:36.38:312,36,0	1/1:8,7:15:26.75:236,27,0	1/1:10,11:18:23.78:300,24,0	1/1:4,23:28:53.78:603,54,0	1/1:6,2:8:8.13:59,8,0	1/1:8,14:22:41.49:364,41,0	1/1:7,16:23:47.85:416,48,0	1/1:5,8:13:17.52:153,18,0	1/1:2,19:21:59.87:521,60,0	0/0:5,0:15:25:0,25,99	0/0:5,0:22:37.93:0,38,129	0/0:6,0:9:12.95:0,13,55
chr10	23486409	.	T	TG	2014.81	PASS	AB=0.951;AC=35;AF=0.625;AN=56;BaseQRankSum=6.520;DP=643;FS=9.420;HRun=0;HaplotypeScore=250.2141;InbreedingCoeff=0.2479;MQ=52.12;MQ0=16;MQRankSum=-7.379;QD=4.26;ReadPosRankSum=9.277;VQSLOD=1.3321;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:28,3:31:2.40:123,0,2	0/1:9,0:9:9.02:21,0,9	0/0:66,0:15:9.35:0,9,120	0/0:60,0:19:14.96:0,15,174	1/1:29,1:30:8.05:113,8,0	1/1:23,0:23:30.70:116,31,0	0/1:17,1:17:2.98:95,0,3	0/1:23,0:23:19.76:190,0,20	1/1:13,0:13:17.14:67,17,0	0/1:23,0:23:11.37:92,0,11	1/1:26,0:26:9.10:101,9,0	1/1:20,1:21:16.60:66,17,0	1/1:19,0:19:13.89:93,14,0	0/1:23,0:23:6:73,0,6	1/1:26,0:26:18.69:140,19,0	1/1:17,1:18:31.11:142,31,0	1/1:14,2:16:22.25:95,22,0	0/1:15,2:17:7.36:96,0,7	0/1:19,1:17:15.74:51,0,16	1/1:28,0:28:19.56:114,20,0	0/1:6,1:7:2.74:58,0,3	1/1:20,1:21:19.44:145,19,0	1/1:20,0:20:27.36:119,27,0	0/1:13,2:15:2.15:27,0,2	0/1:26,0:26:22.15:58,0,22	0/0:14,0:14:41.97:0,42,364	0/0:21,0:21:56.98:0,57,489	0/0:9,0:9:23.96:0,24,198
chr10	23486419	.	T	TAA	13086.40	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=7.379;DP=605;FS=10.309;HRun=3;HaplotypeScore=228.8936;InbreedingCoeff=0.9491;MQ=53.86;MQ0=13;MQRankSum=-9.822;QD=28.45;ReadPosRankSum=2.968;VQSLOD=2.9097;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:24,5:29:77.94:785,78,0	1/1:9,0:9:27:267,27,0	0/0:55,0:11:6.34:0,6,83	0/0:52,0:19:27.65:0,28,270	1/1:30,1:31:86.62:852,87,0	1/1:21,1:22:65.91:603,66,0	1/1:17,1:17:50.97:508,51,0	1/1:19,1:20:60.13:703,60,0	1/1:12,0:12:35.96:330,36,0	1/1:23,0:23:65.83:656,66,0	1/1:26,0:27:77.81:740,78,0	1/1:21,1:22:65.92:630,66,0	1/1:18,0:18:54:540,54,0	1/1:21,0:21:59.94:567,60,0	1/1:24,0:24:72.02:747,72,0	1/1:13,1:14:39.42:364,39,0	1/1:11,4:15:45.02:452,45,0	1/1:16,3:19:57.12:673,57,0	1/1:18,1:17:7.89:417,8,0	1/1:26,1:27:77.80:693,78,0	1/1:6,0:6:12.49:138,12,0	1/1:17,1:18:53.95:537,54,0	1/1:19,0:19:56.97:567,57,0	1/1:13,3:16:33.01:375,33,0	1/1:30,1:31:92.86:942,93,0	0/0:14,0:14:36.01:0,36,350	0/0:18,0:18:47.92:0,48,398	0/0:6,0:6:15.01:0,15,142
chr10	23486448	.	GAAC	G	18545.11	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=8.479;DP=587;FS=1.388;HRun=0;HaplotypeScore=200.4839;InbreedingCoeff=0.9909;MQ=64.86;MQ0=0;MQRankSum=-9.115;QD=39.63;ReadPosRankSum=3.171;VQSLOD=5.3392;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:90.31:0,90,1966	1/1:0,10:10:30.10:482,30,0	0/0:14,0:14:33.11:0,33,719	0/0:15,0:14:17.42:0,17,298	1/1:2,29:31:84.29:1336,84,0	1/1:3,20:23:54.18:867,54,0	1/1:3,13:16:27.09:434,27,0	1/1:6,29:35:87.27:1346,87,0	1/1:2,17:19:45.15:722,45,0	1/1:0,22:22:66.23:1060,66,0	1/1:2,29:31:84.29:1347,84,0	1/1:3,23:26:69.24:1108,69,0	1/1:3,17:20:48.16:771,48,0	1/1:3,18:21:48.16:770,48,0	1/1:3,23:26:66.22:1060,66,0	1/1:0,15:15:42.14:675,42,0	1/1:3,12:15:30.10:482,30,0	1/1:2,15:18:42.14:675,42,0	1/1:3,14:17:39.13:616,39,0	1/1:4,22:26:66.22:1039,66,0	1/1:2,6:8:12.04:192,12,0	1/1:2,20:22:57.19:915,57,0	1/1:1,16:17:48.16:770,48,0	1/1:4,15:19:33.06:530,33,0	1/1:2,29:31:84.29:1349,84,0	0/0:16,0:16:45.15:0,45,980	0/0:27,0:27:72.25:0,72,1580	0/0:8,0:8:24.08:0,24,530
chr10	23487234	.	TTC	T	2691.90	PASS	AB=0.913;AC=39;AF=0.696;AN=56;BaseQRankSum=6.901;DP=382;FS=8.146;HRun=0;HaplotypeScore=102.1473;InbreedingCoeff=0.4772;MQ=51.25;MQ0=13;MQRankSum=-2.130;QD=10.01;ReadPosRankSum=1.096;VQSLOD=2.9697;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:13,1:13:23.81:74,0,24	1/1:1,2:3:5.91:53,6,0	0/0:32,0:14:27.42:0,27,493	0/0:41,1:19:17.29:0,17,618	0/0:10,2:13:0.47:0,0,1	1/1:9,5:14:17.06:201,17,0	1/1:9,1:10:11.94:163,12,0	0/1:24,6:26:99:290,0,112	1/1:8,10:20:12.39:298,12,0	1/1:10,4:13:19.38:195,19,0	0/1:14,0:13:0:0,0,0	1/1:8,3:15:17.13:176,17,0	1/1:13,2:18:35:305,35,0	1/1:11,1:12:16.61:209,17,0	1/1:11,5:16:14.95:155,15,0	1/1:7,1:9:17.48:145,17,0	1/1:4,1:5:3.41:72,3,0	1/1:4,2:6:7.93:102,8,0	0/1:12,2:13:90.42:166,0,90	1/1:7,0:6:3.01:44,3,0	1/1:8,0:6:5.99:50,6,0	0/1:11,1:12:0.01:20,0,0	1/1:5,1:5:2.84:14,3,0	1/1:4,4:8:7.26:76,7,0	1/1:6,2:8:5.50:58,6,0	0/0:9,0:9:22.71:0,23,424	0/0:10,0:10:28.29:0,28,443	0/0:7,0:7:21.07:0,21,413
chr10	23487236	.	C	CT	719.01	PASS	AB=0.982;AC=32;AF=0.571;AN=56;BaseQRankSum=6.241;DP=369;FS=0.000;HRun=2;HaplotypeScore=105.5165;InbreedingCoeff=0.3233;MQ=45.97;MQ0=13;MQRankSum=-2.797;QD=2.75;ReadPosRankSum=0.184;VQSLOD=-0.3904;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:13,0:12:12.28:12,0,41	1/1:4,0:4:1.26:7,1,0	0/0:29,0:11:30.07:0,30,390	0/0:40,0:17:38.10:0,38,472	0/1:11,0:12:0:0,0,0	0/1:13,0:13:1.09:47,0,1	1/1:10,0:10:4.35:50,4,0	0/1:27,0:23:51.47:51,0,178	1/1:18,0:20:18.04:108,18,0	1/1:15,0:14:17.49:93,17,0	0/1:14,0:13:0:0,0,0	1/1:11,3:15:8.43:139,8,0	1/1:14,2:17:4.70:92,5,0	1/1:12,2:12:15.89:123,16,0	1/1:15,0:15:7.86:36,8,0	0/1:8,0:9:33.67:34,0,42	0/1:5,0:5:0.25:1,0,0	0/1:6,0:6:7.12:23,0,7	0/1:14,0:13:2.19:2,0,133	1/1:7,0:6:2.04:6,2,0	1/1:8,0:6:5.36:23,5,0	0/1:12,0:12:0.78:7,0,1	0/0:6,0:5:1.55:0,2,4	1/1:8,0:8:2.38:22,2,0	0/0:6,0:6:1.46:0,1,4	0/0:9,0:9:22.67:0,23,333	0/0:10,0:10:28.34:0,28,378	0/0:7,0:7:21.07:0,21,290
chr10	23487239	.	CCCTCCCTCCCTT	C	2356.41	PASS	AB=0.945;AC=27;AF=0.500;AN=54;BaseQRankSum=-2.133;DP=351;FS=12.031;HRun=0;HaplotypeScore=130.8535;InbreedingCoeff=0.1288;MQ=39.79;MQ0=13;MQRankSum=-1.489;QD=10.71;ReadPosRankSum=-5.344;VQSLOD=-0.4520;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:12:3.01:0,3,76	0/1:4,0:4:56.22:68,0,56	0/0:28,0:10:3:0,3,26	0/0:34,0:13:8.18:0,8,264	1/1:11,1:12:5.76:73,6,0	1/1:13,0:13:18.07:308,18,0	1/1:9,1:9:13.80:178,14,0	0/1:25,0:21:40.48:40,0,86	0/1:17,2:19:99:215,0,276	1/1:7,8:14:3.99:218,4,0	1/1:11,2:12:5.76:73,6,0	0/1:15,0:15:99:110,0,180	0/1:8,8:16:36.59:471,0,37	0/1:14,1:13:55.96:228,0,56	0/1:15,0:15:3.63:4,0,139	0/0:9,0:9:17.89:0,18,371	0/1:5,0:5:57.91:99,0,58	0/0:6,0:6:5.85:0,6,35	0/1:12,0:11:30.79:127,0,31	1/1:2,3:4:3.01:38,3,0	./.	1/1:11,2:13:12.91:188,13,0	1/1:7,0:5:8.88:72,9,0	0/0:9,0:7:5.75:0,6,32	1/1:6,0:6:2.94:18,3,0	0/0:10,0:10:21.05:0,21,718	0/0:10,0:10:15.01:0,15,433	0/0:6,0:6:5.98:0,6,200
chr10	23487247	.	CCCTT	C	2032.41	PASS	AB=0.983;AC=37;AF=0.661;AN=56;BaseQRankSum=0.591;DP=310;FS=0.000;HRun=0;HaplotypeScore=92.6601;InbreedingCoeff=0.1407;MQ=39.27;MQ0=10;MQRankSum=-1.990;QD=8.40;ReadPosRankSum=-3.137;VQSLOD=1.1459;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,0:8:2.56:39,3,0	0/1:5,0:5:2.44:68,0,2	0/0:15,0:5:6.01:0,6,58	0/0:27,0:9:10.34:0,10,209	1/1:9,0:9:5.52:33,6,0	1/1:13,0:13:30.50:215,31,0	1/1:14,0:13:26.60:190,27,0	0/1:20,0:16:23.62:48,0,24	0/1:19,0:19:49.66:196,0,50	1/1:14,0:13:1.79:110,2,0	1/1:12,0:11:5.48:33,5,0	0/1:14,0:16:55.29:108,0,55	1/1:14,0:15:15.39:220,15,0	0/1:12,0:11:10.43:120,0,10	1/1:6,9:15:21.59:150,22,0	0/1:9,2:11:3.26:249,0,3	0/1:5,0:5:31.45:50,0,31	0/1:4,0:4:12.06:34,0,12	0/1:8,0:7:6.11:79,0,6	1/1:4,0:3:2.94:18,3,0	1/1:5,0:3:3:25,3,0	1/1:10,0:10:9.62:87,10,0	1/1:7,0:5:11.83:79,12,0	1/1:9,0:7:5.67:31,6,0	1/1:5,0:5:2.94:18,3,0	0/0:11,0:11:26.92:0,27,369	0/0:10,0:10:19.25:0,19,260	0/0:4,0:4:5.98:0,6,100
chr10	23487250	.	TTC	T	204.06	PASS	AB=0.959;AC=13;AF=0.232;AN=56;BaseQRankSum=5.151;DP=270;FS=0.000;HRun=0;HaplotypeScore=81.3793;InbreedingCoeff=-0.0498;MQ=47.67;MQ0=10;MQRankSum=-3.445;QD=1.79;ReadPosRankSum=1.982;VQSLOD=1.5063;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:6,1:6:9.37:0,9,61	0/1:5,0:5:21.42:21,0,80	0/0:16,0:6:12.04:0,12,224	0/0:29,0:11:9.06:0,9,339	0/0:6,0:6:5.74:0,6,36	0/1:9,2:11:3.31:3,0,149	0/1:14,0:13:63.69:64,0,128	0/0:14,0:12:17.30:0,17,113	0/1:17,1:18:54.53:55,0,189	0/1:12,0:12:36.34:36,0,128	0/0:7,0:6:5.99:0,6,48	0/0:15,0:15:13.78:0,14,287	0/1:13,0:13:21.02:21,0,44	0/0:10,0:8:16.50:0,17,103	0/1:12,3:15:63.66:64,0,80	0/1:11,0:11:14.04:14,0,62	0/0:7,0:7:9.32:0,9,96	0/0:3,1:4:5.48:0,5,37	0/0:5,0:4:10.10:0,10,76	0/0:3,0:3:5.96:0,6,43	0/0:5,0:3:2.35:0,2,17	0/0:8,0:8:19.12:0,19,136	0/1:6,0:5:1.83:2,0,45	1/1:5,2:5:4.26:48,4,0	1/1:1,1:2:2.92:17,3,0	0/0:9,0:9:27.09:0,27,541	0/0:9,0:9:19.29:0,19,311	0/0:2,0:2:6.02:0,6,120
chr10	23487646	.	A	AT	1185.35	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=-7.170;DP=564;FS=7.199;HRun=8;HaplotypeScore=58.8824;InbreedingCoeff=0.8226;MQ=70.75;MQ0=0;MQRankSum=-3.219;QD=18.24;ReadPosRankSum=0.928;VQSLOD=3.2345;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:86.96:0,87,766	0/0:9,0:9:23.99:0,24,212	0/1:14,0:11:0.87:1,0,44	0/0:10,0:7:5.49:0,5,25	0/0:32,0:32:86.99:0,87,781	0/0:15,0:15:38.99:0,39,351	0/0:17,0:17:45.01:0,45,407	0/0:25,0:25:68.99:0,69,615	0/0:22,0:22:63.02:0,63,571	0/0:15,0:15:39:0,39,350	0/0:19,0:19:53.48:0,53,467	0/0:22,0:22:60.02:0,60,545	0/0:14,0:14:42.01:0,42,379	0/0:13,0:13:33:0,33,297	1/1:3,21:24:60.17:688,60,0	1/1:3,23:26:54.15:618,54,0	0/0:27,0:27:78.02:0,78,707	0/0:16,0:16:38.96:0,39,348	0/0:28,0:28:65.98:0,66,590	0/0:23,0:23:53.99:0,54,485	0/0:15,0:15:42:0,42,378	0/0:20,0:20:53.99:0,54,481	0/0:23,0:23:63.01:0,63,569	0/0:10,0:10:30.01:0,30,270	0/0:26,0:26:68.98:0,69,615	0/0:21,0:21:60.01:0,60,542	0/0:35,0:35:99:0,102,917	0/0:13,0:13:39.02:0,39,356
chr10	23488605	.	TA	T	294.62	PASS	AB=0.915;AC=5;AF=0.089;AN=56;BaseQRankSum=2.342;DP=597;FS=7.745;HRun=12;HaplotypeScore=97.8391;InbreedingCoeff=0.2820;MQ=70.89;MQ0=0;MQRankSum=0.612;QD=4.27;ReadPosRankSum=2.105;VQSLOD=1.5158;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,19:27:23.32:364,23,0	0/0:10,0:10:26.99:0,27,255	0/0:15,0:15:4.04:0,4,128	0/1:8,0:8:7.93:8,0,25	0/0:20,0:22:41.88:0,42,399	0/0:36,1:37:69.92:0,70,873	0/1:15,3:18:21.62:22,0,348	0/0:24,2:26:24.79:0,25,399	0/0:18,0:18:39.07:0,39,390	0/0:22,0:23:50.88:0,51,477	0/0:20,1:23:24.45:0,24,374	0/0:15,1:19:15.67:0,16,315	0/0:14,1:16:0.84:0,1,210	0/0:18,1:19:28.53:0,29,368	0/0:21,2:23:34.72:0,35,505	0/0:17,0:17:33.06:0,33,328	0/0:26,0:28:62.92:0,63,607	0/0:12,1:14:32.89:0,33,312	0/1:14,2:16:19.42:19,0,186	0/0:38,0:39:71.20:0,71,720	0/0:14,0:14:32.90:0,33,298	0/0:24,0:24:60.11:0,60,604	0/0:22,1:25:17.81:0,18,363	0/0:12,0:12:30.06:0,30,305	0/0:25,0:28:47.91:0,48,460	0/0:34,1:35:56.88:0,57,318	0/0:30,0:30:66.65:0,67,308	0/0:10,0:10:24.97:0,25,118
chr10	23488606	.	A	AC	1688.82	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.864;DP=594;FS=16.989;HRun=0;HaplotypeScore=99.9767;InbreedingCoeff=0.9920;MQ=70.87;MQ0=0;MQRankSum=-1.693;QD=24.13;ReadPosRankSum=1.344;VQSLOD=2.9021;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:77.18:0,77,604	0/0:10,0:10:30.08:0,30,386	0/0:15,0:15:41.09:0,41,417	0/0:8,0:8:14.07:0,14,134	0/0:21,0:21:55.78:0,56,673	0/0:38,0:38:99:0,111,1375	0/0:18,0:18:51.09:0,51,634	0/0:26,0:26:75.08:0,75,810	0/0:18,0:18:54.12:0,54,657	0/0:24,0:24:53.92:0,54,687	0/0:23,0:23:58.04:0,58,667	0/0:19,0:19:41.32:0,41,510	0/0:16,0:16:45.93:0,46,498	0/0:20,0:20:51.12:0,51,630	0/0:22,0:22:64.05:0,64,811	0/0:15,0:15:45.12:0,45,566	0/0:29,0:29:76.86:0,77,977	0/0:14,0:14:33.42:0,33,436	0/0:15,0:15:42.06:0,42,474	0/0:39,0:39:99:0,102,1199	0/0:14,0:14:42.09:0,42,510	0/0:24,0:24:69.20:0,69,896	0/0:24,0:24:61.70:0,62,679	0/0:12,0:12:36.10:0,36,468	0/0:29,0:29:73.43:0,73,836	1/1:8,25:33:75.78:886,76,0	1/1:5,23:28:80.85:734,81,0	1/1:2,7:9:25.10:212,25,0
chr10	23488610	.	A	AG	1102.35	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=10.818;DP=586;FS=26.736;HRun=0;HaplotypeScore=96.0562;InbreedingCoeff=0.9806;MQ=67.29;MQ0=0;MQRankSum=-1.702;QD=15.75;ReadPosRankSum=2.673;VQSLOD=2.9222;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:83.62:0,84,659	0/0:10,0:10:30.09:0,30,389	0/0:12,0:11:15.72:0,16,238	0/0:7,0:7:11.07:0,11,123	0/0:23,0:23:64.76:0,65,747	0/0:35,0:35:99:0,102,1303	0/0:17,0:17:51.08:0,51,638	0/0:24,0:24:66.06:0,66,728	0/0:20,0:20:51.13:0,51,633	0/0:26,0:26:71.77:0,72,843	0/0:22,0:22:58.65:0,59,678	0/0:19,0:19:47.31:0,47,560	0/0:18,0:18:53.94:0,54,566	0/0:19,0:19:57.14:0,57,693	0/0:24,0:24:72.11:0,72,870	0/0:15,0:15:45.11:0,45,563	0/0:30,0:30:79.76:0,80,965	0/0:12,0:12:32.36:0,32,424	0/0:17,0:17:51.03:0,51,546	0/0:34,0:34:99:0,102,1204	0/0:14,0:14:42.10:0,42,519	0/0:25,0:25:72.20:0,72,930	0/0:24,0:24:67.73:0,68,737	0/0:11,0:11:33.10:0,33,444	0/0:27,0:27:74.39:0,74,861	1/1:8,25:33:50.86:594,51,0	1/1:5,23:28:57.26:492,57,0	1/1:2,7:9:23.34:159,23,0
chr10	23489547	.	CA	C	12850.65	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=3.170;DP=555;FS=12.918;HRun=7;HaplotypeScore=102.5310;InbreedingCoeff=0.9834;MQ=77.30;MQ0=1;MQRankSum=-3.170;QD=26.07;ReadPosRankSum=3.165;VQSLOD=4.0402;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:78.15:0,78,947	1/1:0,5:5:15.03:153,15,0	0/0:10,0:10:15.04:0,15,179	0/0:22,0:22:49.79:0,50,503	1/1:1,8:9:21.01:204,21,0	1/1:3,13:16:36.08:367,36,0	1/1:2,24:26:63.14:642,63,0	1/1:4,22:26:66.13:662,66,0	1/1:3,22:25:63.14:642,63,0	1/1:1,21:22:63.14:642,63,0	1/1:1,18:19:54.12:550,54,0	1/1:1,23:24:63.14:643,63,0	1/1:3,30:33:81.14:816,81,0	1/1:3,19:22:51.11:520,51,0	1/1:4,22:26:66.13:666,66,0	1/1:1,21:22:63.14:643,63,0	1/1:0,10:10:24.05:245,24,0	1/1:3,17:20:45.10:459,45,0	1/1:3,13:15:36.06:357,36,0	1/1:3,26:29:72.12:724,72,0	1/1:1,27:28:78.18:795,78,0	1/1:0,17:17:51.12:520,51,0	1/1:0,18:18:44.46:458,44,0	1/1:2,24:26:66.15:673,66,0	1/1:1,11:12:33.07:337,33,0	1/1:1,14:15:42.10:429,42,0	1/1:2,19:21:51.12:520,51,0	1/1:0,6:6:18.04:184,18,0
chr10	23489862	.	ATT	A	10836.40	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=9.920;DP=434;FS=31.310;HRun=9;HaplotypeScore=138.4262;InbreedingCoeff=0.9695;MQ=67.92;MQ0=0;MQRankSum=-5.478;QD=29.61;ReadPosRankSum=2.359;VQSLOD=3.0582;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,19:20:57.17:664,57,0	1/1:0,4:4:12.04:140,12,0	0/0:9,0:9:18.04:0,18,266	0/0:8,0:8:17.91:0,18,254	1/1:1,28:29:84.67:963,85,0	1/1:3,13:16:39.59:455,40,0	1/1:2,5:7:15.51:174,16,0	1/1:8,22:28:60.63:699,61,0	1/1:1,9:10:24.07:280,24,0	1/1:1,18:19:54.16:629,54,0	1/1:4,11:15:30.08:348,30,0	1/1:2,11:13:30.96:334,31,0	1/1:0,11:11:27.08:314,27,0	1/1:1,12:13:36.11:419,36,0	1/1:1,18:18:51.08:577,51,0	1/1:1,20:21:60.18:699,60,0	1/1:0,20:20:54.16:629,54,0	1/1:4,24:28:69.20:804,69,0	1/1:2,10:12:30.08:349,30,0	1/1:3,16:19:45.12:524,45,0	1/1:2,6:8:18.05:210,18,0	1/1:2,7:9:18.05:210,18,0	1/1:0,15:15:45.13:524,45,0	1/1:0,10:10:27.01:298,27,0	1/1:1,17:18:51.15:594,51,0	0/0:0,0:24:59.89:0,60,211	0/0:2,0:21:44.71:0,45,158	0/0:2,0:6:9.98:0,10,35
chr10	23490049	.	TAGC	T	2550.45	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-5.764;DP=666;FS=12.785;HRun=0;HaplotypeScore=154.9216;InbreedingCoeff=0.9139;MQ=83.51;MQ0=0;MQRankSum=-1.338;QD=38.07;ReadPosRankSum=3.390;VQSLOD=4.2432;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,120,2616	0/0:4,0:4:12.03:0,12,218	0/0:19,0:19:48.01:0,48,954	0/0:22,0:22:66.18:0,66,1340	0/0:22,0:22:54.15:0,54,1102	0/0:24,0:24:63.18:0,63,1294	0/0:21,0:21:60.21:0,60,1339	0/0:30,0:30:84.25:0,84,1674	0/0:24,0:24:66.23:0,66,1474	0/0:38,0:38:99:0,111,2434	0/0:17,0:17:48.15:0,48,1029	0/0:22,0:22:60.21:0,60,1338	0/0:20,0:20:51.15:0,51,1041	0/0:26,0:26:72.22:0,72,1520	0/0:33,0:33:96.29:0,96,2056	0/0:34,0:34:93.31:0,93,2032	0/0:20,0:20:57.20:0,57,1273	0/0:22,0:22:66.23:0,66,1474	0/0:22,0:22:63.22:0,63,1388	0/0:15,0:15:45.13:0,45,917	0/0:25,0:25:72.25:0,72,1602	0/0:18,0:18:54.19:0,54,1191	0/0:23,0:23:63.19:0,63,1356	0/0:22,0:22:60.21:0,60,1316	0/0:34,0:34:93.31:0,93,2005	1/1:2,23:25:2.12:935,2,0	1/1:1,27:28:69.23:1110,69,0	1/1:0,14:14:39.13:637,39,0
chr10	23491371	.	C	CAAA	5397.55	PASS	AB=1.000;AC=51;AF=0.911;AN=56;BaseQRankSum=-0.405;DP=475;FS=11.710;HRun=12;HaplotypeScore=97.9472;InbreedingCoeff=0.6015;MQ=55.29;MQ0=3;MQRankSum=-3.821;QD=12.85;ReadPosRankSum=-4.037;VQSLOD=0.7719;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:2,0:34:74.41:0,74,446	1/1:7,0:10:11.89:105,12,0	0/0:21,0:10:2.72:0,3,65	0/1:8,0:2:0:0,0,0	1/1:10,0:12:20.80:136,21,0	1/1:21,0:21:24.04:312,24,0	1/1:12,0:12:12:158,12,0	1/1:18,0:26:38.86:385,39,0	1/1:10,0:10:9.03:127,9,0	1/1:11,0:27:59.86:557,60,0	1/1:10,0:10:14.87:122,15,0	1/1:14,0:14:8.76:96,9,0	1/1:21,1:23:26.51:216,27,0	1/1:8,0:8:3.01:42,3,0	1/1:20,0:22:6.59:248,7,0	1/1:13,0:15:24.98:282,25,0	1/1:12,1:14:11.48:116,11,0	1/1:20,0:20:12.04:171,12,0	1/1:13,0:14:26.72:243,27,0	1/1:22,0:22:44.62:478,45,0	1/1:9,1:10:9.03:131,9,0	1/1:12,0:22:26.77:238,27,0	1/1:12,0:12:11.99:132,12,0	1/1:10,0:10:20.94:189,21,0	1/1:20,0:20:18.01:209,18,0	1/1:9,13:24:30.69:424,31,0	1/1:4,15:20:6.02:110,6,0	1/1:3,11:14:12.02:171,12,0
chr10	23491381	.	A	AAAAAAAAGAAG	12722.83	PASS	AB=1.000;AC=46;AF=0.821;AN=56;BaseQRankSum=-4.381;DP=562;FS=17.723;HRun=0;HaplotypeScore=141.0991;InbreedingCoeff=0.6068;MQ=55.53;MQ0=3;MQRankSum=-3.484;QD=26.84;ReadPosRankSum=-3.197;VQSLOD=2.6858;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:93.26:0,93,2031	1/1:6,0:7:15.05:323,15,0	0/0:17,0:7:16.20:0,16,273	0/1:9,0:4:10.21:10,0,24	1/1:21,0:21:39.15:438,39,0	1/1:4,0:26:18.94:769,19,0	1/1:1,0:16:6.90:362,7,0	1/1:26,0:26:57.40:1014,57,0	1/1:0,0:16:9.03:383,9,0	1/1:30,0:30:78.63:1585,79,0	1/1:2,0:18:26.95:360,27,0	1/1:2,0:22:9.03:317,9,0	1/1:20,0:20:29.20:782,29,0	1/1:1,0:14:3.01:134,3,0	1/1:4,0:25:1.64:622,2,0	1/1:3,0:19:24.60:644,25,0	1/1:3,0:18:12.04:433,12,0	1/1:1,0:23:12.04:448,12,0	1/1:3,0:16:43.11:840,43,0	1/1:3,0:29:49:1061,49,0	1/1:3,0:14:9.02:237,9,0	1/1:21,0:22:33.84:650,34,0	1/1:7,0:18:7.08:252,7,0	1/1:12,0:12:24.50:435,25,0	1/1:5,1:34:17.80:497,18,0	0/1:19,0:19:99:126,0,258	0/0:20,0:20:17.76:0,18,140	0/0:14,0:14:11.51:0,12,83
chr10	23491387	.	G	GAAGAAG	7522.23	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-2.965;DP=462;FS=4.733;HRun=0;HaplotypeScore=101.4476;InbreedingCoeff=0.8317;MQ=57.52;MQ0=3;MQRankSum=-4.881;QD=20.61;ReadPosRankSum=-0.691;VQSLOD=4.0173;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:90.11:0,90,1304	1/1:5,0:5:14.99:237,15,0	0/0:15,0:7:9.03:0,9,166	0/0:7,0:5:6.54:0,7,34	1/1:10,10:22:23.98:302,24,0	1/1:17,0:17:15.05:390,15,0	1/1:12,0:12:9.03:209,9,0	1/1:23,0:23:27.42:321,27,0	1/1:11,0:11:9.03:249,9,0	1/1:26,0:26:47.93:604,48,0	1/1:15,0:15:15.03:195,15,0	1/1:15,0:15:6.02:162,6,0	1/1:20,0:20:22.92:411,23,0	1/1:13,0:13:3.01:83,3,0	1/1:16,0:16:21.07:554,21,0	1/1:18,0:18:21.07:605,21,0	1/1:16,0:16:17.98:441,18,0	1/1:17,0:17:18.06:494,18,0	1/1:15,0:15:31.46:557,31,0	1/1:20,0:20:28.33:595,28,0	1/1:16,0:16:12.03:198,12,0	1/1:15,0:15:26.99:325,27,0	1/1:16,0:16:6.96:168,7,0	1/1:11,0:11:11.85:228,12,0	1/1:26,0:26:9.02:195,9,0	0/0:11,0:11:28.70:0,29,295	0/0:14,0:14:17.17:0,17,126	0/0:12,0:12:12.41:0,12,90
chr10	23491840	.	T	TA	1244.52	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-4.016;DP=772;FS=0.000;HRun=2;HaplotypeScore=127.9188;InbreedingCoeff=0.9685;MQ=87.96;MQ0=0;MQRankSum=-2.494;QD=36.60;ReadPosRankSum=0.586;VQSLOD=3.0224;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,33:34:90.30:1339,90,0	0/0:5,0:5:15.05:0,15,195	0/0:21,0:21:54.14:0,54,673	0/0:33,0:33:64.60:0,65,1001	0/0:25,0:25:75.24:0,75,974	0/0:25,0:25:75.24:0,75,974	0/0:34,0:34:99:0,99,1271	0/0:52,0:52:99:0,147,1884	0/0:28,0:28:84.27:0,84,1091	0/0:31,0:31:93.30:0,93,1206	0/0:19,0:19:57.19:0,57,740	0/0:30,0:30:90.28:0,90,1154	0/0:33,0:33:99:0,99,1269	0/0:35,0:35:99:0,105,1363	0/0:38,0:38:99:0,105,1349	0/0:37,0:37:99:0,110,1394	0/0:31,0:31:87.26:0,87,1113	0/0:9,0:9:27.07:0,27,335	0/0:20,0:20:57.18:0,57,728	0/0:34,0:34:96.31:0,96,1246	0/0:35,0:35:99:0,99,1285	0/0:22,0:22:63.20:0,63,818	0/0:14,0:14:42.14:0,42,545	0/0:33,0:33:93.30:0,93,1206	0/0:26,0:26:75.24:0,75,974	0/0:23,0:23:69.21:0,69,881	0/0:39,0:39:99:0,117,1514	0/0:6,0:6:15.05:0,15,195
chr10	23492993	.	AT	A	1782.17	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=9.764;DP=447;FS=4.031;HRun=11;HaplotypeScore=46.6750;InbreedingCoeff=0.9606;MQ=76.92;MQ0=1;MQRankSum=-1.155;QD=15.91;ReadPosRankSum=3.084;VQSLOD=4.3985;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,11:16:32.92:271,33,0	0/0:6,0:6:14.73:0,15,160	0/0:12,0:12:13.95:0,14,178	0/0:8,0:8:17.70:0,18,156	0/0:25,2:27:25.99:0,26,673	0/0:19,0:19:48.11:0,48,504	0/0:15,0:15:42.08:0,42,438	0/0:32,0:33:75.05:0,75,776	0/0:13,0:13:33.08:0,33,351	0/0:11,0:11:24.06:0,24,256	0/0:24,0:24:48.11:0,48,506	0/0:17,1:18:17.46:0,17,390	0/0:17,0:16:39.09:0,39,410	0/0:14,0:14:42.11:0,42,448	1/1:4,18:22:26:369,26,0	1/1:1,12:13:29.96:246,30,0	0/0:17,0:17:48.12:0,48,512	0/0:11,0:11:30.07:0,30,319	0/0:14,0:14:36.09:0,36,384	0/0:28,0:28:69.16:0,69,723	0/0:7,0:7:18.05:0,18,192	0/0:12,0:12:30.07:0,30,313	0/0:12,0:12:33.08:0,33,352	0/0:4,0:4:9.02:0,9,96	0/0:12,1:13:8.44:0,8,295	1/1:9,17:26:21.90:387,22,0	1/1:1,20:21:29.79:395,30,0	1/1:0,13:14:37.99:301,38,0
chr10	23493077	.	GGCCA	G	245.32	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=1.361;DP=519;FS=10.193;HRun=0;HaplotypeScore=95.9631;InbreedingCoeff=0.9573;MQ=94.74;MQ0=0;MQRankSum=-2.402;QD=35.05;ReadPosRankSum=1.506;VQSLOD=2.8774;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,6:7:18.06:336,18,0	0/0:8,0:8:24.08:0,24,638	0/0:26,0:26:63.19:0,63,1476	0/0:21,0:21:42.08:0,42,944	0/0:28,0:28:75.73:0,76,1960	0/0:14,0:13:36.12:0,36,957	0/0:27,0:27:75.26:0,75,1998	0/0:32,0:32:78.25:0,78,1976	0/0:17,0:17:48.16:0,48,1270	0/0:17,0:17:51.17:0,51,1321	0/0:27,0:27:75.26:0,75,1929	0/0:17,0:17:51.18:0,51,1349	0/0:27,0:27:77.86:0,78,2079	0/0:8,0:8:24.08:0,24,598	0/0:21,0:21:54.19:0,54,1441	0/0:25,0:25:69.24:0,69,1840	0/0:19,0:19:54.19:0,54,1440	0/0:14,0:14:39.61:0,40,1040	0/0:19,0:19:57.20:0,57,1484	0/0:18,0:18:48.16:0,48,1198	0/0:13,0:13:39.13:0,39,1038	0/0:11,0:11:30.10:0,30,798	0/0:20,0:20:60.21:0,60,1571	0/0:10,0:10:30.10:0,30,800	0/0:19,0:19:54.19:0,54,1429	0/0:18,0:18:54.19:0,54,1415	0/0:32,0:32:96.33:0,96,2561	0/0:4,0:4:12.04:0,12,320
chr10	23494140	.	G	GAC	3011.78	PASS	AB=0.789;AC=35;AF=0.625;AN=56;BaseQRankSum=4.178;DP=405;FS=12.802;HRun=0;HaplotypeScore=79.6571;InbreedingCoeff=0.4716;MQ=57.70;MQ0=32;MQRankSum=1.768;QD=12.10;ReadPosRankSum=2.232;VQSLOD=2.2149;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:8:11.97:0,12,95	1/1:0,4:4:9.03:142,9,0	0/0:34,0:12:7.92:0,8,80	0/0:54,0:11:6.29:0,6,125	1/1:11,1:12:4.90:219,5,0	1/1:2,6:9:3.90:51,4,0	0/1:8,5:12:0.69:241,0,1	1/1:20,0:19:30.93:312,31,0	0/1:3,6:10:6.65:58,0,7	1/1:4,1:15:36.44:323,36,0	1/1:7,0:8:0.47:48,0,0	1/1:1,8:9:9.03:142,9,0	1/1:14,1:15:14.49:154,14,0	1/1:6,13:18:3.67:244,4,0	0/0:11,0:11:5.98:0,6,47	0/0:3,0:9:3:0,3,25	1/1:4,0:22:4.97:161,5,0	0/1:11,0:11:0.41:100,0,0	1/1:1,7:9:3.93:192,4,0	1/1:2,0:2:3.01:52,3,0	1/1:6,0:17:9.30:91,9,0	0/1:9,3:12:3.43:188,0,3	0/1:6,2:7:3.85:71,0,4	1/1:4,19:22:14.93:196,15,0	1/1:5,3:8:14.97:200,15,0	0/0:13,0:11:31.47:0,31,256	0/0:20,0:20:40.88:0,41,284	0/0:3,0:3:8.99:0,9,75
chr10	23494205	.	G	GGAAAGAAA	12810.14	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=5.489;DP=380;FS=1.916;HRun=0;HaplotypeScore=195.7947;InbreedingCoeff=0.7533;MQ=66.70;MQ0=2;MQRankSum=-3.660;QD=39.29;ReadPosRankSum=4.073;VQSLOD=4.7088;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:12,0:12:21.48:288,21,0	1/1:7,0:7:15.01:270,15,0	0/0:20,0:15:14.34:0,14,487	0/0:34,0:25:23.47:0,23,458	1/1:20,0:20:45.14:918,45,0	1/1:8,0:8:21.07:435,21,0	1/1:6,0:5:11.97:153,12,0	1/1:27,0:23:17.22:214,17,0	1/1:9,0:9:24.01:515,24,0	1/1:21,0:21:47.99:1038,48,0	1/1:13,0:13:33.11:680,33,0	1/1:10,0:10:24.08:433,24,0	1/1:18,0:18:29.89:483,30,0	1/1:15,0:15:26.95:415,27,0	1/1:9,0:9:9.03:147,9,0	1/1:8,0:8:18.06:288,18,0	1/1:16,0:16:15.05:313,15,0	1/1:3,0:4:5.97:66,6,0	1/1:6,0:6:18:226,18,0	1/1:20,0:20:57.14:853,57,0	1/1:4,0:5:3:25,3,0	1/1:14,0:14:33.08:529,33,0	1/1:17,0:17:45.15:910,45,0	1/1:10,0:10:6.49:102,6,0	1/1:12,0:12:36.12:684,36,0	1/1:7,13:20:51.14:1861,51,0	1/1:5,9:14:21.07:778,21,0	1/1:4,1:5:11.90:185,12,0
chr10	23494220	.	AAG	A	2274	PASS	AB=0.938;AC=24;AF=0.429;AN=56;BaseQRankSum=6.287;DP=352;FS=33.357;HRun=0;HaplotypeScore=121.3072;InbreedingCoeff=-0.7414;MQ=49.39;MQ0=5;MQRankSum=-3.742;QD=7.95;ReadPosRankSum=0.998;VQSLOD=1.7150;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:12,0:11:78.13:198,0,78	0/1:5,0:5:77.66:78,0,95	0/0:22,0:16:31.89:0,32,620	0/0:22,0:15:34.66:0,35,571	0/1:21,0:21:93.69:94,0,531	0/1:9,0:9:61.36:61,0,162	0/1:7,0:6:56.15:56,0,201	0/1:23,5:23:99:142,0,556	0/1:6,2:8:53.06:53,0,304	0/1:18,1:19:99:101,0,627	0/1:11,0:11:78.42:78,0,395	0/1:8,0:8:99:109,0,194	0/1:17,0:17:99:188,0,292	0/1:7,2:9:99:158,0,188	0/1:5,0:5:45.51:65,0,46	0/1:6,2:8:91.24:127,0,91	0/1:12,0:12:18.32:18,0,238	0/1:5,0:5:29.97:52,0,30	0/1:6,2:8:99:120,0,185	0/1:20,0:20:99:257,0,542	0/1:2,1:3:36.74:37,0,48	0/1:12,0:12:99:158,0,133	0/1:17,0:17:56.70:57,0,588	0/1:7,2:9:26.08:26,0,44	0/1:13,1:14:99:190,0,275	0/1:19,0:19:7.69:8,0,468	0/0:14,0:14:28.89:0,29,320	0/0:8,0:8:24.08:0,24,368
chr10	23494222	.	G	GAA	4552.58	PASS	AB=0.771;AC=26;AF=0.464;AN=56;BaseQRankSum=8.061;DP=350;FS=32.209;HRun=3;HaplotypeScore=114.8818;InbreedingCoeff=-0.7802;MQ=50.51;MQ0=5;MQRankSum=-2.055;QD=15.38;ReadPosRankSum=2.245;VQSLOD=0.6620;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:5,7:11:60.97:300,0,61	0/1:3,2:5:75.82:118,0,76	0/0:23,0:17:34.82:0,35,599	0/0:23,0:16:18.61:0,19,494	0/1:14,7:21:99:164,0,429	0/1:4,4:8:99:182,0,115	0/1:5,2:6:95.93:96,0,155	0/1:27,2:23:99:177,0,559	0/1:8,0:8:75.13:75,0,219	0/1:14,4:18:99:237,0,423	0/1:7,4:11:99:136,0,286	0/1:4,4:8:99:192,0,129	0/1:8,9:17:99:297,0,237	0/1:6,3:9:99:257,0,115	0/1:2,3:5:36.39:104,0,36	0/1:6,2:8:72.77:181,0,73	0/1:7,5:12:42.11:42,0,139	0/1:3,2:5:28.81:73,0,29	0/1:7,1:8:99:148,0,146	0/1:11,9:20:99:451,0,423	0/1:3,0:3:36.75:37,0,39	0/1:5,7:12:99:363,0,103	0/1:10,8:18:99:128,0,397	1/1:5,2:7:1.99:55,2,0	0/1:8,6:14:99:367,0,188	0/1:17,1:18:39.79:290,0,40	0/1:13,0:13:82.73:83,0,127	0/0:8,0:8:1.75:0,2,211
chr10	23494237	.	A	AAAGG	1857.79	PASS	AB=0.863;AC=7;AF=0.125;AN=56;BaseQRankSum=8.419;DP=350;FS=0.000;HRun=0;HaplotypeScore=142.5311;InbreedingCoeff=0.3283;MQ=49.15;MQ0=5;MQRankSum=-6.206;QD=32.03;ReadPosRankSum=2.438;VQSLOD=3.3131;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:9:5.59:0,6,71	0/0:4,0:4:6.02:0,6,100	0/0:20,0:13:23.29:0,23,339	0/0:23,0:17:13.89:0,14,215	0/0:19,0:19:6.49:0,6,411	0/1:8,0:8:23.47:23,0,136	0/1:8,0:7:7.10:7,0,139	0/0:43,0:38:96.15:0,96,1356	0/0:8,0:8:21.07:0,21,352	0/0:19,0:19:14.46:0,14,592	0/0:11,0:11:21.07:0,21,345	0/0:8,0:8:11.76:0,12,200	0/0:15,0:15:20.80:0,21,320	0/0:7,0:7:12.04:0,12,200	0/0:4,0:4:5.91:0,6,99	0/0:5,0:5:3.48:0,3,52	0/0:12,0:12:11.93:0,12,188	0/0:8,0:8:11.96:0,12,203	0/0:8,0:8:12.03:0,12,178	0/0:19,0:19:16.63:0,17,482	0/0:3,0:3:5.97:0,6,69	0/0:10,0:10:5.18:0,5,143	0/0:16,0:16:30.07:0,30,495	0/0:6,0:6:2.87:0,3,38	0/0:14,0:14:20.34:0,20,347	1/1:9,10:19:35.91:776,36,0	1/1:5,8:13:29.85:672,30,0	0/1:3,7:10:20.66:517,0,21
chr10	23494270	.	TTATA	T	1029.43	PASS	AB=1.000;AC=9;AF=0.196;AN=46;BaseQRankSum=6.200;DP=209;FS=0.000;HRun=0;HaplotypeScore=79.4383;InbreedingCoeff=0.6092;MQ=61.91;MQ0=1;MQRankSum=-5.523;QD=26.40;ReadPosRankSum=1.841;VQSLOD=3.2313;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:5:0:0,0,1	1/1:1,0:1:2.60:10,3,0	0/0:9,0:7:3.01:0,3,49	0/0:8,0:8:4.79:0,5,80	0/0:8,0:8:9.03:0,9,229	0/1:4,0:4:0:0,0,0	0/0:5,0:5:9.01:0,9,176	0/0:42,0:41:87.12:0,87,1804	0/0:5,0:5:6.02:0,6,152	0/0:11,0:11:21.07:0,21,532	0/0:8,0:8:8.59:0,9,227	./.	0/0:8,0:8:12.04:0,12,304	0/0:2,0:2:3.01:0,3,76	0/0:0,0:3:2.80:0,3,13	./.	0/0:8,0:9:12.04:0,12,304	0/0:6,0:6:18.06:0,18,456	0/0:5,0:5:9.03:0,9,228	0/0:6,0:7:6.02:0,6,152	./.	./.	0/0:10,0:10:10.28:0,10,230	./.	0/0:9,0:9:11.35:0,11,304	1/1:5,5:10:17.99:270,18,0	1/1:2,8:10:18.06:280,18,0	1/1:2,12:13:36.12:602,36,0
chr10	23494291	.	C	CATAT	2747.61	PASS	AB=0.586;AC=36;AF=0.750;AN=48;BaseQRankSum=-3.741;DP=171;FS=1.434;HRun=0;HaplotypeScore=73.5583;InbreedingCoeff=0.3699;MQ=63.54;MQ0=2;MQRankSum=-0.099;QD=19.63;ReadPosRankSum=3.253;VQSLOD=3.4587;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:5:1.43:0,1,6	0/0:0,1:1:2.74:0,3,12	0/0:7,0:4:2.98:0,3,21	0/0:10,0:8:1.21:0,1,4	1/1:8,0:9:5.72:29,6,0	0/1:1,3:4:0:0,0,0	1/1:1,1:2:6.02:98,6,0	1/1:8,17:23:44.98:752,45,0	1/1:3,1:4:3.01:76,3,0	1/1:6,2:8:15:251,15,0	0/1:2,4:6:0.62:46,0,1	0/0:1,1:2:0:0,0,0	1/1:2,2:4:12.03:172,12,0	./.	1/1:1,2:3:3.01:57,3,0	./.	1/1:4,2:6:6.02:115,6,0	1/1:2,5:7:15.05:378,15,0	1/1:2,1:3:6.02:149,6,0	1/1:6,1:7:0.62:81,1,0	1/1:3,0:3:2.99:23,3,0	./.	1/1:2,2:4:6.49:75,6,0	./.	1/1:5,4:9:8.70:112,9,0	1/1:2,0:8:16.68:84,17,0	1/1:4,0:9:8.55:73,9,0	1/1:4,0:17:32.04:280,32,0
chr10	23494442	.	TCACA	T	1729.14	PASS	AB=0.851;AC=42;AF=0.875;AN=48;BaseQRankSum=-0.985;DP=348;FS=2.860;HRun=0;HaplotypeScore=61.1455;InbreedingCoeff=0.1062;MQ=68.39;MQ0=13;MQRankSum=-1.179;QD=6.94;ReadPosRankSum=3.222;VQSLOD=1.7549;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:19:6.02:0,6,100	1/1:3,1:4:3.01:46,3,0	./.	./.	0/1:12,1:14:2.41:76,0,2	1/1:12,3:15:3.01:46,3,0	1/1:13,1:14:3.01:46,3,0	./.	1/1:11,7:18:12.04:185,12,0	1/1:6,0:7:3:28,3,0	1/1:5,0:11:14.98:132,15,0	0/1:7,4:12:3.42:84,0,3	1/1:5,8:13:12.04:185,12,0	1/1:5,3:9:12.03:167,12,0	1/1:6,0:9:9.01:84,9,0	1/1:6,0:10:6.01:56,6,0	1/1:6,0:6:6.01:74,6,0	1/1:9,8:17:13.65:210,14,0	1/1:11,0:11:0.94:2,1,0	1/1:5,4:9:2.04:98,2,0	0/1:11,3:13:17.94:40,0,18	1/1:5,3:8:3.01:46,3,0	0/1:7,0:7:0:0,0,0	1/1:13,4:15:3.01:46,3,0	1/1:9,0:9:6.01:71,6,0	1/1:4,0:9:6.01:56,6,0	./.	1/1:1,0:4:6.01:56,6,0
chr10	23494452	.	A	ACACACG	66.34	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=1.460;DP=359;FS=2.895;HRun=0;HaplotypeScore=88.4613;InbreedingCoeff=0.6574;MQ=60.65;MQ0=17;MQRankSum=-1.227;QD=2.65;ReadPosRankSum=-1.426;VQSLOD=1.3699;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,18:23:6.02:147,6,0	0/0:4,0:4:11.99:0,12,121	0/0:27,0:13:23.99:0,24,221	0/0:20,0:11:20.14:0,20,218	0/0:11,0:11:26.99:0,27,270	0/0:8,0:8:14.99:0,15,146	0/0:13,0:13:32.88:0,33,289	0/0:14,0:14:32.93:0,33,282	0/0:19,0:19:39:0,39,416	0/0:9,0:8:23.99:0,24,230	0/0:13,0:13:23.86:0,24,280	0/0:12,0:12:29.90:0,30,310	0/0:11,0:11:18.03:0,18,243	0/0:9,0:9:24.02:0,24,289	0/0:10,0:10:21.01:0,21,236	0/0:10,0:10:11.94:0,12,134	0/0:7,0:7:20.95:0,21,220	0/0:24,0:22:11.05:0,11,470	0/0:14,0:14:38.77:0,39,317	0/0:10,0:10:23.94:0,24,251	0/0:18,0:17:32.98:0,33,298	0/0:8,0:8:17.99:0,18,173	0/0:6,0:6:11.98:0,12,99	0/0:21,0:18:32.94:0,33,290	0/0:10,0:10:20.99:0,21,181	0/0:8,0:8:21:0,21,218	0/0:14,0:14:32.83:0,33,255	0/0:4,0:4:6.02:0,6,91
chr10	23494660	.	GAA	G	600.09	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.351;DP=438;FS=3.114;HRun=8;HaplotypeScore=63.5236;InbreedingCoeff=0.8882;MQ=68.07;MQ0=0;MQRankSum=-0.499;QD=28.58;ReadPosRankSum=2.259;VQSLOD=3.6307;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,21:21:57.18:695,57,0	0/0:7,0:8:24.08:0,24,384	0/0:11,0:10:26.95:0,27,365	0/0:3,0:3:5.97:0,6,70	0/0:18,0:18:42.14:0,42,708	0/0:23,0:23:66.18:0,66,1079	0/0:10,0:10:27.05:0,27,423	0/0:28,0:28:81.26:0,81,1312	0/0:12,0:12:33.11:0,33,558	0/0:20,0:20:54.18:0,54,913	0/0:10,0:10:30.10:0,30,507	0/0:15,0:15:45.05:0,45,646	0/0:13,0:13:39.09:0,39,623	0/0:20,0:20:60.20:0,60,988	0/0:14,0:14:33.11:0,33,558	0/0:15,0:15:39.10:0,39,625	0/0:37,0:37:99:0,108,1740	0/0:25,0:25:72.25:0,72,1205	0/0:20,0:20:60.20:0,60,988	0/0:9,0:9:24.08:0,24,403	0/0:7,0:7:21.06:0,21,331	0/0:7,0:7:21.06:0,21,330	0/0:10,0:10:30.09:0,30,482	0/0:8,0:8:21.07:0,21,353	0/0:15,0:15:45.15:0,45,759	0/0:24,0:24:69.24:0,69,1162	0/0:17,0:18:51.14:0,51,787	0/0:17,0:17:51.17:0,51,862
chr10	23494834	.	GCACA	G	476.85	PASS	AB=0.733;AC=6;AF=0.115;AN=52;BaseQRankSum=-0.762;DP=443;FS=3.804;HRun=0;HaplotypeScore=98.3274;InbreedingCoeff=0.4017;MQ=47.33;MQ0=9;MQRankSum=1.333;QD=8.08;ReadPosRankSum=2.171;VQSLOD=2.4996;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:30:35.84:0,36,589	0/0:7,0:7:8.97:0,9,105	./.	./.	0/0:5,0:14:3.01:0,3,49	0/0:5,0:22:9.28:0,9,79	0/0:23,0:23:17.88:0,18,283	0/0:34,0:33:28.18:0,28,348	0/0:3,0:12:3.01:0,3,48	0/0:11,0:10:18.06:0,18,304	0/0:10,0:9:6.02:0,6,103	0/0:4,0:16:6.02:0,6,103	0/0:8,0:8:12.01:0,12,115	0/0:2,0:14:0:0,0,0	0/1:7,2:13:3.35:82,0,3	0/0:1,0:3:1.55:0,2,4	0/0:18,0:19:12:0,12,179	0/0:21,0:21:15.51:0,16,209	0/0:15,0:14:15.05:0,15,272	0/0:13,0:12:3.01:0,3,30	0/0:23,0:22:2.54:0,3,19	0/0:12,0:12:9.02:0,9,108	0/0:11,0:11:6.02:0,6,74	0/0:30,0:29:17.77:0,18,274	0/0:18,0:18:15.04:0,15,215	0/1:18,7:24:40.61:145,0,41	1/1:6,5:9:15.05:233,15,0	1/1:4,5:10:11.27:140,11,0
chr10	23494871	.	C	CACAT	941	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=3.744;DP=525;FS=0.000;HRun=0;HaplotypeScore=124.7928;InbreedingCoeff=-0.0917;MQ=64.53;MQ0=20;MQRankSum=-3.212;QD=5.01;ReadPosRankSum=3.339;VQSLOD=2.3219;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:29,4:32:65.56:836,66,0	0/1:11,0:11:49.86:50,0,122	0/0:31,0:14:38.92:0,39,349	0/0:49,0:29:71.13:0,71,699	0/0:18,0:18:26.45:0,26,202	0/1:18,0:18:19.22:19,0,207	0/0:28,0:27:32.36:0,32,316	0/0:25,0:24:47.28:0,47,358	0/1:10,0:10:18.71:19,0,79	0/1:15,0:14:22.75:23,0,184	0/1:12,0:12:46.98:47,0,143	0/1:12,0:11:51.16:51,0,75	0/1:13,0:12:3.97:4,0,119	0/0:15,0:14:20.47:0,20,170	0/0:11,0:11:30:0,30,290	0/0:7,0:7:21:0,21,196	0/0:22,0:22:4.83:0,5,207	0/1:18,0:18:13.02:13,0,108	0/0:12,0:11:30.71:0,31,231	0/0:13,0:13:0.03:0,0,105	0/0:26,0:24:20.75:0,21,150	0/1:14,0:14:0.89:1,0,102	0/1:12,0:12:21.31:21,0,102	0/0:34,0:33:34.25:0,34,308	0/1:19,0:19:5.83:6,0,151	0/0:17,0:17:42.37:0,42,371	0/0:16,0:15:38.96:0,39,363	0/0:13,0:13:27.45:0,27,260
chr10	23494931	.	CT	C	839.77	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.830;DP=519;FS=0.775;HRun=2;HaplotypeScore=78.4154;InbreedingCoeff=0.9961;MQ=93.67;MQ0=0;MQRankSum=-2.389;QD=32.30;ReadPosRankSum=1.734;VQSLOD=3.5665;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,26:26:72.23:935,72,0	0/0:11,0:11:30.10:0,30,450	0/0:26,0:26:78.20:0,78,1057	0/0:21,0:21:51.12:0,51,716	0/0:23,0:23:66.22:0,66,988	0/0:23,0:23:69.19:0,69,1009	0/0:20,0:20:57.19:0,57,851	0/0:29,0:29:84.24:0,84,1196	0/0:11,0:11:33.08:0,33,471	0/0:14,0:14:42.14:0,42,613	0/0:11,0:11:33.09:0,33,468	0/0:16,0:16:48.15:0,48,699	0/0:11,0:11:33.11:0,33,493	0/0:21,0:21:60.16:0,60,866	0/0:17,0:17:51.17:0,51,754	0/0:10,0:10:30.10:0,30,449	0/0:25,0:25:63.21:0,63,944	0/0:17,0:17:48.14:0,48,697	0/0:14,0:14:42.14:0,42,628	0/0:22,0:22:63.21:0,63,944	0/0:20,0:20:48.16:0,48,718	0/0:15,0:15:45.14:0,45,654	0/0:19,0:19:57.18:0,57,835	0/0:36,0:36:99:0,105,1541	0/0:16,0:16:48.15:0,48,695	0/0:20,0:20:60.19:0,60,881	0/0:17,0:17:51.16:0,51,739	0/0:8,0:8:24.06:0,24,338
chr10	23495375	.	CT	C	10095.77	PASS	AB=0.977;AC=46;AF=0.821;AN=56;BaseQRankSum=6.845;DP=605;FS=10.888;HRun=10;HaplotypeScore=128.1094;InbreedingCoeff=0.8079;MQ=72.43;MQ0=0;MQRankSum=-0.106;QD=19.45;ReadPosRankSum=3.333;VQSLOD=4.0233;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:54.11:0,54,576	1/1:2,12:14:32.99:286,33,0	0/1:14,0:13:4.49:4,0,123	0/1:19,1:20:5.50:5,0,187	1/1:3,26:29:68.90:592,69,0	1/1:2,25:27:74.98:651,75,0	1/1:0,15:15:44.99:391,45,0	1/1:7,23:32:42.79:566,43,0	1/1:3,13:16:8.81:305,9,0	1/1:5,28:33:80.95:699,81,0	1/1:2,22:24:59.96:521,60,0	1/1:0,12:12:32.99:286,33,0	1/1:0,18:18:53.99:469,54,0	1/1:5,20:26:56.01:475,56,0	1/1:4,16:20:44.98:391,45,0	1/1:5,21:27:62.01:527,62,0	1/1:3,22:25:53.97:469,54,0	1/1:0,7:8:20.03:162,20,0	1/1:3,16:20:47.02:394,47,0	1/1:1,22:23:53.76:447,54,0	1/1:3,24:27:65.97:573,66,0	1/1:3,20:24:58.94:492,59,0	1/1:1,19:21:52.71:448,53,0	1/1:1,18:21:27.88:448,28,0	1/1:1,20:21:56.99:495,57,0	0/0:26,0:28:71.85:0,72,745	0/0:21,1:22:40.12:0,40,666	0/0:15,0:15:23.18:0,23,378
chr10	23496878	.	G	GCACACACACACACACA	14244.43	PASS	AC=50;AF=0.926;AN=54;BaseQRankSum=-2.381;DP=632;FS=1.772;HRun=0;HaplotypeScore=240.5391;InbreedingCoeff=0.3760;MQ=46.31;MQ0=3;MQRankSum=-0.787;QD=24.31;ReadPosRankSum=2.922;VQSLOD=3.5507;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:26:12.48:334,12,0	1/1:4,0:10:3.01:56,3,0	0/0:19,0:9:7.84:0,8,162	0/0:14,0:3:3.01:0,3,35	1/1:10,0:23:2.72:181,3,0	1/1:15,0:28:9.03:405,9,0	1/1:11,0:19:6.01:227,6,0	1/1:40,0:35:42.62:969,43,0	1/1:19,0:23:18.06:734,18,0	1/1:13,0:34:40.81:1263,41,0	1/1:12,0:30:6.02:340,6,0	1/1:5,0:14:3.01:136,3,0	1/1:10,0:25:12.04:544,12,0	1/1:17,0:20:27.05:776,27,0	1/1:9,0:28:12.04:596,12,0	1/1:9,0:29:18.06:1015,18,0	1/1:7,0:16:6.02:277,6,0	1/1:4,0:4:5.98:58,6,0	1/1:6,0:12:21:561,21,0	1/1:15,7:34:3.01:183,3,0	./.	1/1:6,0:22:8.92:364,9,0	1/1:16,0:37:8.88:401,9,0	1/1:10,0:16:3.01:134,3,0	1/1:13,0:24:9.49:320,9,0	1/1:13,0:29:51.12:2323,51,0	1/1:8,0:29:24.55:1361,25,0	1/1:3,0:11:12.04:686,12,0
chr10	23497887	.	A	AAG	1184.22	PASS	AB=0.920;AC=8;AF=0.143;AN=56;BaseQRankSum=-0.316;DP=413;FS=10.461;HRun=0;HaplotypeScore=122.6919;InbreedingCoeff=0.4159;MQ=48.59;MQ0=25;MQRankSum=0.208;QD=11.72;ReadPosRankSum=3.050;VQSLOD=2.6478;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:6.43:0,6,151	0/0:9,0:7:17.94:0,18,207	0/0:38,0:5:8.12:0,8,59	0/1:46,0:8:0.35:0,0,99	0/0:17,0:15:20.77:0,21,257	0/0:16,0:15:29.99:0,30,312	0/1:8,0:6:4.29:4,0,122	0/0:27,0:24:69.20:0,69,994	0/0:9,0:9:27.03:0,27,336	0/0:15,0:12:29.93:0,30,306	0/0:20,0:19:38.56:0,39,435	0/0:7,0:7:15.01:0,15,163	0/0:11,0:11:23.89:0,24,278	0/0:10,0:12:20.82:0,21,230	0/0:12,0:12:23.78:0,24,311	0/0:14,0:14:33.06:0,33,444	0/1:11,0:11:4.54:5,0,219	0/0:3,0:2:6.02:0,6,84	0/0:7,0:5:12.03:0,12,151	0/0:15,0:15:33.08:0,33,448	0/0:5,0:5:8.97:0,9,111	0/0:10,0:10:27.07:0,27,363	0/0:20,0:18:36.04:0,36,421	0/0:12,0:12:9.03:0,9,125	0/0:14,0:12:27.06:0,27,339	0/1:8,6:14:26.56:411,0,27	1/1:9,5:16:46.64:681,47,0	1/1:1,3:4:12.04:212,12,0
chr10	23497895	.	AG	A	787.64	PASS	AB=0.790;AC=15;AF=0.278;AN=54;BaseQRankSum=2.865;DP=415;FS=0.000;HRun=1;HaplotypeScore=123.8221;InbreedingCoeff=-0.4007;MQ=40.69;MQ0=33;MQRankSum=-4.181;QD=3.92;ReadPosRankSum=4.183;VQSLOD=0.2865;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:9.88:0,10,115	0/1:6,2:6:21.62:68,0,22	./.	0/0:47,0:2:3.15:0,3,12	0/1:13,5:15:40.22:52,0,40	0/1:9,5:13:18.63:108,0,19	0/0:9,0:7:4.20:0,4,95	0/0:24,0:21:45.78:0,46,559	0/1:7,3:10:50.33:80,0,50	0/1:14,6:16:83.46:83,0,225	0/1:14,5:18:75.23:75,0,146	0/1:7,2:9:27.20:27,0,79	0/1:7,4:11:26.53:27,0,64	0/1:8,4:12:44.97:45,0,111	0/0:16,0:16:28.79:0,29,331	0/0:12,0:12:24.72:0,25,264	0/1:6,2:9:34.75:35,0,105	0/0:3,0:2:2.92:0,3,8	0/0:7,0:5:11.07:0,11,120	0/1:11,1:12:4.08:4,0,185	0/0:5,0:5:8.85:0,9,72	0/1:6,4:10:38.52:39,0,110	0/1:10,8:16:36.59:133,0,37	0/1:12,1:13:25.22:84,0,25	0/1:13,4:14:76.79:77,0,102	0/0:17,0:17:33.07:0,33,470	0/0:17,0:17:31.52:0,32,512	0/0:8,0:8:17.81:0,18,249
chr10	23497896	.	GAGAGA	G	1248.18	PASS	AB=0.971;AC=20;AF=0.370;AN=54;BaseQRankSum=4.329;DP=418;FS=0.000;HRun=0;HaplotypeScore=139.8343;InbreedingCoeff=-0.4695;MQ=40.48;MQ0=32;MQRankSum=-2.984;QD=5.20;ReadPosRankSum=6.661;VQSLOD=1.5764;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:3.04:0,3,107	1/1:8,0:6:5.44:110,5,0	./.	0/0:50,0:3:3.77:0,4,29	0/1:16,1:15:25.74:26,0,42	0/1:13,1:13:14.85:194,0,15	0/1:9,0:7:33.91:34,0,69	0/0:26,0:23:41.50:0,42,489	0/1:9,0:10:53.70:89,0,54	0/1:20,0:16:99:149,0,219	0/1:16,4:18:79.15:154,0,79	0/1:8,1:9:60.66:61,0,61	0/1:11,0:11:40.44:74,0,40	0/1:12,0:12:87.56:88,0,91	0/0:15,0:15:6.85:0,7,286	0/1:12,0:12:17.18:17,0,187	0/1:9,0:9:26.78:27,0,99	0/1:3,0:2:4.82:28,0,5	0/0:9,0:6:13.86:0,14,156	0/1:13,0:13:13.20:13,0,152	0/0:5,0:5:4.81:0,5,53	0/1:10,0:10:28.28:28,0,113	0/1:18,0:16:57.58:165,0,58	0/1:12,0:12:29.75:46,0,30	0/1:17,0:14:88.18:89,0,88	0/0:17,0:17:20.90:0,21,648	0/1:15,0:15:8.22:8,0,572	0/0:8,0:8:17.95:0,18,308
chr10	23497897	.	AG	A	40.80	PASS	AB=0.948;AC=12;AF=0.222;AN=54;BaseQRankSum=5.146;DP=421;FS=6.311;HRun=1;HaplotypeScore=127.7176;InbreedingCoeff=-0.0876;MQ=40.17;MQ0=35;MQRankSum=-3.464;QD=0.23;ReadPosRankSum=5.046;VQSLOD=-0.6838;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:9.91:0,10,116	0/1:8,0:6:15.12:15,0,60	./.	0/1:53,0:3:0.58:1,0,19	0/0:18,0:15:8.98:0,9,74	0/1:14,0:13:8.53:9,0,43	0/0:8,1:7:4.48:0,4,112	0/1:25,0:22:13.93:14,0,400	0/0:10,0:10:11.24:0,11,142	0/0:20,0:16:16.28:0,16,287	0/1:20,0:18:1.93:2,0,207	0/0:9,0:9:10.57:0,11,121	0/0:11,0:11:15.67:0,16,164	0/0:12,0:12:7.74:0,8,172	0/0:15,0:15:25.79:0,26,307	0/0:12,0:12:24.72:0,25,264	0/0:9,0:9:3.85:0,4,132	1/1:2,0:2:5.93:46,6,0	0/1:8,1:6:7.05:7,0,135	0/1:11,2:13:44.72:45,0,88	0/1:3,2:5:21.82:22,0,29	0/0:10,0:10:19.93:0,20,190	0/1:18,0:16:8.96:9,0,90	0/1:11,0:11:4.24:4,0,48	0/0:17,0:14:15.69:0,16,171	0/0:17,0:17:32.88:0,33,464	0/0:16,0:16:22.26:0,22,491	0/0:8,0:8:17.81:0,18,251
chr10	23497898	.	GAGA	G	1319.55	PASS	AB=0.826;AC=22;AF=0.407;AN=54;BaseQRankSum=3.095;DP=425;FS=1.739;HRun=0;HaplotypeScore=132.8292;InbreedingCoeff=-0.4044;MQ=40.19;MQ0=36;MQRankSum=-4.379;QD=5.30;ReadPosRankSum=6.267;VQSLOD=2.0658;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:20,0:20:2.85:3,0,103	1/1:6,2:6:7.53:103,8,0	./.	0/0:55,0:3:4.38:0,4,26	0/1:12,6:15:30.09:30,0,46	0/1:9,5:13:14.31:198,0,14	0/1:9,0:7:25.06:25,0,79	0/0:24,0:21:34.13:0,34,524	0/1:5,4:9:49.71:102,0,50	0/1:13,7:16:99:169,0,219	0/1:16,4:19:99:144,0,114	0/1:8,2:10:66.34:66,0,107	0/1:7,4:11:34.82:67,0,35	0/1:8,4:12:77.89:78,0,89	0/0:15,0:15:10.58:0,11,284	0/0:13,0:13:9.12:0,9,243	0/1:8,2:10:26.76:27,0,134	1/1:2,0:2:0.48:29,0,0	0/1:10,0:7:1.67:2,0,171	0/1:12,1:14:53.35:53,0,128	0/1:5,0:5:2.39:2,0,33	0/1:6,4:10:47.89:48,0,107	0/1:10,8:16:54.87:183,0,55	0/1:10,1:11:30.73:38,0,31	0/1:12,4:13:86.73:105,0,87	0/0:16,0:16:31.76:0,32,536	0/0:16,0:16:17.25:0,17,514	0/0:8,0:8:17.95:0,18,260
chr10	23497900	.	GA	G	581.43	PASS	AB=0.969;AC=20;AF=0.370;AN=54;BaseQRankSum=5.587;DP=434;FS=4.621;HRun=1;HaplotypeScore=129.4100;InbreedingCoeff=-0.5047;MQ=39.93;MQ0=37;MQRankSum=-4.256;QD=2.33;ReadPosRankSum=6.819;VQSLOD=-0.5087;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:20,0:20:4.16:4,0,88	0/1:9,0:7:47.23:54,0,47	./.	0/0:57,0:5:12.69:0,13,90	0/1:18,0:15:8.02:8,0,65	0/1:14,0:13:21.50:107,0,22	0/1:8,1:7:24.25:24,0,115	0/0:24,0:21:40.43:0,40,541	0/1:9,0:9:37.23:37,0,91	0/1:21,0:17:64.06:64,0,255	0/1:21,0:19:71.97:72,0,171	0/1:10,0:10:21.68:22,0,130	0/1:10,0:10:22.86:23,0,69	0/1:12,0:12:31.91:32,0,141	0/0:16,0:16:28.75:0,29,333	0/0:13,0:13:27.73:0,28,302	0/1:10,0:10:15.78:16,0,117	0/1:3,0:2:3.91:28,0,4	0/1:8,1:7:4.35:4,0,171	0/1:11,3:14:51.07:51,0,126	0/1:4,2:6:2:2,0,51	0/1:10,0:10:14.64:15,0,128	0/1:18,0:16:73.04:104,0,73	0/1:11,0:11:24.30:24,0,42	0/1:16,0:13:41.80:42,0,110	0/0:18,0:18:44.63:0,45,435	0/0:15,0:15:35.43:0,35,407	0/0:8,0:8:17.78:0,18,193
chr10	23497915	.	GGA	G	235.58	PASS	AB=0.880;AC=18;AF=0.321;AN=56;BaseQRankSum=5.804;DP=446;FS=14.620;HRun=0;HaplotypeScore=138.6973;InbreedingCoeff=-0.3384;MQ=39.04;MQ0=34;MQRankSum=-3.421;QD=1.04;ReadPosRankSum=2.368;VQSLOD=1.7896;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:19,0:20:2.37:2,0,211	0/0:8,0:7:14.50:0,15,181	0/0:41,0:2:2.99:0,3,23	0/0:57,0:7:3.22:0,3,127	0/1:14,3:15:22:22,0,92	0/1:13,3:15:23.05:23,0,185	0/1:7,0:6:17.28:17,0,139	0/0:28,0:25:68.13:0,68,927	0/1:6,1:7:33.92:34,0,136	0/1:17,3:16:57.80:58,0,419	0/1:19,4:22:9.97:10,0,492	0/0:11,1:12:24.08:0,24,404	0/1:6,2:8:51.06:51,0,90	0/1:12,2:14:5.87:6,0,429	0/0:19,0:19:51.17:0,51,833	0/0:14,0:14:9.22:0,9,351	0/1:9,1:10:20.34:20,0,197	1/1:2,0:1:3.01:32,3,0	0/0:13,0:11:18.49:0,18,379	0/1:9,3:12:51.84:52,0,319	0/0:7,1:8:16.30:0,16,231	0/1:3,2:5:11.72:12,0,45	0/1:15,4:16:0.42:0,0,329	0/0:9,1:10:3.69:0,4,95	0/1:12,2:11:21.27:21,0,187	0/1:15,0:19:16.01:16,0,283	0/1:8,0:14:7.18:7,0,327	0/0:4,0:8:20.91:0,21,200
chr10	23497925	.	AGAAGGAGAGAG	A	8085.10	PASS	AB=0.975;AC=42;AF=0.750;AN=56;BaseQRankSum=-2.366;DP=443;FS=1.326;HRun=0;HaplotypeScore=148.9316;InbreedingCoeff=-0.0133;MQ=38.84;MQ0=33;MQRankSum=1.541;QD=23.99;ReadPosRankSum=2.429;VQSLOD=4.1721;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:22:12.32:363,12,0	0/1:7,0:6:3.42:162,0,3	0/0:42,0:3:6.02:0,6,94	0/0:64,0:8:10.08:0,10,207	1/1:15,1:14:9.47:138,9,0	0/1:13,1:13:11.64:314,0,12	1/1:8,0:7:17.89:183,18,0	0/1:30,0:27:99:701,0,105	1/1:5,2:7:15.02:320,15,0	1/1:17,0:13:38.38:368,38,0	1/1:20,2:20:36.45:520,36,0	1/1:9,0:9:23.91:234,24,0	1/1:7,1:8:20.91:320,21,0	1/1:13,0:13:35.91:373,36,0	0/1:20,0:20:72.05:357,0,72	0/1:15,0:15:23.60:303,0,24	1/1:8,0:8:14.95:164,15,0	0/1:3,0:2:11.01:67,0,11	0/1:13,0:11:55.69:192,0,56	1/1:16,0:16:38.95:506,39,0	1/1:7,0:7:4.74:171,5,0	1/1:6,0:6:5.91:38,6,0	1/1:15,1:14:23.97:299,24,0	1/1:9,0:9:7.37:78,7,0	1/1:14,0:12:22.45:267,22,0	0/1:14,1:15:67.20:607,0,67	0/1:12,2:15:78.43:676,0,78	0/1:7,0:7:35.91:363,0,36
chr10	23497936	.	G	GAGA	13597.86	PASS	AB=0.667;AC=51;AF=0.911;AN=56;BaseQRankSum=-3.691;DP=449;FS=2.541;HRun=0;HaplotypeScore=90.4870;InbreedingCoeff=0.6853;MQ=45.25;MQ0=25;MQRankSum=0.507;QD=40.59;ReadPosRankSum=3.401;VQSLOD=5.9572;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,15:24:31.78:595,32,0	1/1:2,5:6:12.04:276,12,0	0/0:45,0:5:12.04:0,12,184	0/0:69,0:11:18.79:0,19,207	1/1:4,11:13:11.92:274,12,0	1/1:6,9:14:21.07:394,21,0	1/1:1,6:7:14.98:295,15,0	1/1:2,21:25:69.22:1415,69,0	1/1:4,4:8:18.06:374,18,0	1/1:5,16:19:44.64:910,45,0	1/1:7,15:21:40.22:865,40,0	1/1:1,9:10:26.98:569,27,0	1/1:4,6:11:15.05:328,15,0	1/1:1,13:13:30.10:690,30,0	1/1:1,18:19:54.14:1194,54,0	1/1:3,10:13:33.11:740,33,0	1/1:1,6:7:12.02:276,12,0	0/1:1,1:2:6.29:63,0,6	1/1:3,9:12:30.06:563,30,0	1/1:4,13:17:33.07:711,33,0	1/1:2,5:7:18.02:326,18,0	1/1:4,2:6:6.02:99,6,0	1/1:4,9:13:23.92:532,24,0	1/1:4,3:8:8.86:167,9,0	1/1:5,10:13:18.06:415,18,0	1/1:2,12:14:33.72:677,34,0	1/1:2,11:13:26.35:503,26,0	1/1:0,6:7:15.05:345,15,0
chr10	23498325	.	C	CA	13788.57	PASS	AB=0.941;AC=53;AF=0.946;AN=56;BaseQRankSum=-3.684;DP=637;FS=1.656;HRun=9;HaplotypeScore=93.2115;InbreedingCoeff=0.6192;MQ=83.45;MQ0=0;MQRankSum=-5.574;QD=22.42;ReadPosRankSum=2.931;VQSLOD=5.3847;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:19:15.40:88,15,0	1/1:1,14:15:42.11:462,42,0	0/0:20,0:22:36.33:0,36,273	0/1:14,1:16:18.62:19,0,48	1/1:5,26:31:43.06:677,43,0	1/1:2,23:26:69.02:744,69,0	1/1:1,14:16:35.93:379,36,0	1/1:7,28:37:67.45:919,67,0	1/1:2,20:23:50.97:545,51,0	1/1:6,25:31:29.05:742,29,0	1/1:2,26:29:58.03:820,58,0	1/1:3,18:21:45.09:484,45,0	1/1:2,14:17:44.95:477,45,0	1/1:2,16:18:36.57:399,37,0	1/1:1,27:29:72.14:796,72,0	1/1:2,22:24:51.14:565,51,0	1/1:1,11:12:21.06:232,21,0	1/1:0,13:13:33.06:353,33,0	1/1:4,21:25:66.06:678,66,0	1/1:5,29:35:63.98:904,64,0	1/1:0,20:20:45.12:498,45,0	1/1:2,28:30:72.19:796,72,0	1/1:3,21:24:54.15:597,54,0	1/1:2,21:23:57.15:631,57,0	1/1:3,24:27:14.07:612,14,0	1/1:12,0:19:21.84:108,22,0	1/1:14,2:24:37.42:206,37,0	1/1:4,0:11:11.43:58,11,0
chr10	23498519	.	TC	T	2204.43	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=10.484;DP=668;FS=15.005;HRun=2;HaplotypeScore=60.7599;InbreedingCoeff=0.9889;MQ=83.59;MQ0=0;MQRankSum=-2.229;QD=34.99;ReadPosRankSum=1.728;VQSLOD=2.4119;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:81.20:0,81,1172	0/0:4,0:4:12.04:0,12,180	0/0:25,0:25:69.15:0,69,925	0/0:14,0:14:42.06:0,42,543	0/0:48,0:48:99:0,141,2071	0/0:25,0:25:75.15:0,75,1094	0/0:17,0:17:51.15:0,51,721	0/0:32,0:32:90.30:0,90,1331	0/0:14,0:14:42.13:0,42,605	0/0:35,0:35:99:0,105,1573	0/0:24,0:24:69.23:0,69,1032	0/0:30,0:30:90.27:0,90,1307	0/0:23,0:23:69.19:0,69,988	0/0:13,0:13:39.11:0,39,558	0/0:21,0:21:63.19:0,63,902	0/0:25,0:25:75.25:0,75,1123	0/0:27,0:27:81.26:0,81,1193	0/0:17,0:17:48.16:0,48,702	0/0:25,0:25:75.20:0,75,1060	0/0:37,0:37:99:0,108,1618	0/0:20,0:20:57.15:0,57,789	0/0:27,0:27:81.25:0,81,1191	0/0:28,0:28:75.23:0,75,1082	0/0:22,0:22:63.20:0,63,922	0/0:23,0:23:66.21:0,66,968	1/1:1,27:28:39.28:990,39,0	1/1:0,24:24:72.23:929,72,0	1/1:0,11:11:33.11:428,33,0
chr10	23499369	.	A	AC	16657.50	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-0.634;DP=412;FS=12.201;HRun=0;HaplotypeScore=89.3124;InbreedingCoeff=0.9109;MQ=66.37;MQ0=0;MQRankSum=-6.472;QD=42.39;ReadPosRankSum=2.875;VQSLOD=4.4440;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,5:8:23.97:300,24,0	1/1:0,4:4:12.04:187,12,0	0/0:9,0:9:21.06:0,21,279	0/0:10,0:10:24.71:0,25,252	1/1:5,27:32:87.27:1319,87,0	1/1:1,14:15:42.14:652,42,0	1/1:1,7:8:21.07:326,21,0	1/1:11,28:39:99:1655,111,0	1/1:1,10:11:33.10:491,33,0	1/1:3,21:24:69.23:1056,69,0	1/1:3,23:26:78.23:1165,78,0	1/1:1,12:13:39.12:582,39,0	1/1:2,13:15:45.15:698,45,0	1/1:0,9:9:27.09:420,27,0	1/1:0,20:20:51.17:798,51,0	1/1:0,15:15:39.13:610,39,0	1/1:0,10:10:24.08:373,24,0	1/1:1,3:4:11.97:158,12,0	1/1:3,12:16:48.15:714,48,0	1/1:3,26:29:78.26:1212,78,0	1/1:0,3:3:9.03:140,9,0	1/1:0,5:5:15.05:232,15,0	1/1:2,11:13:36.12:556,36,0	1/1:1,4:5:12.04:186,12,0	1/1:1,16:17:48.16:745,48,0	1/1:0,17:17:51.17:795,51,0	1/1:3,23:26:63.19:961,63,0	1/1:0,9:9:21.07:328,21,0
chr10	23499381	.	TA	T	9400.19	PASS	AB=0.542;AC=41;AF=0.732;AN=56;BaseQRankSum=9.393;DP=432;FS=0.000;HRun=5;HaplotypeScore=120.8565;InbreedingCoeff=0.8721;MQ=72.12;MQ0=0;MQRankSum=-12.906;QD=29.75;ReadPosRankSum=0.480;VQSLOD=3.6281;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,5:5:6.02:68,6,0	1/1:1,3:4:12.03:136,12,0	0/0:14,0:14:39.12:0,39,504	0/0:11,0:11:24.08:0,24,322	1/1:1,30:31:84.24:950,84,0	1/1:0,15:15:45.13:509,45,0	1/1:1,8:9:21.06:238,21,0	1/1:4,25:29:75.21:849,75,0	0/1:2,11:13:42.94:334,0,43	1/1:2,22:24:69.19:774,69,0	1/1:0,31:31:90.26:1019,90,0	1/1:0,14:14:39.11:441,39,0	1/1:1,12:13:33.09:373,33,0	1/1:4,6:10:27.05:285,27,0	0/0:21,0:21:60.19:0,60,804	0/0:16,0:16:42.13:0,42,558	1/1:1,8:9:24.05:262,24,0	1/1:0,6:6:18.05:204,18,0	1/1:1,15:16:45.13:510,45,0	1/1:4,28:32:84.22:941,84,0	1/1:1,6:7:11.99:122,12,0	1/1:0,8:8:24.07:272,24,0	1/1:0,14:14:42.12:476,42,0	1/1:2,4:6:12.03:136,12,0	1/1:2,18:20:45.11:501,45,0	0/0:18,1:19:23.13:0,23,687	0/0:28,0:28:81.27:0,81,1107	0/0:7,0:7:21.07:0,21,287
chr10	23500463	.	AG	A	12354.80	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-0.672;DP=528;FS=3.801;HRun=3;HaplotypeScore=83.9690;InbreedingCoeff=0.9988;MQ=78.16;MQ0=0;MQRankSum=-4.791;QD=32.77;ReadPosRankSum=2.256;VQSLOD=5.3794;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:63.21:0,63,906	1/1:1,12:13:33.10:409,33,0	0/0:19,0:19:56.83:0,57,732	0/0:24,0:24:37.51:0,38,770	1/1:1,27:28:78.25:966,78,0	1/1:1,22:23:69.22:854,69,0	1/1:1,21:22:51.16:632,51,0	1/1:1,27:28:75.15:882,75,0	1/1:1,10:11:27.08:334,27,0	1/1:1,19:20:60.18:732,60,0	1/1:1,8:9:24.08:297,24,0	1/1:1,13:14:38.99:458,39,0	1/1:0,13:13:36.11:446,36,0	1/1:1,14:15:42.08:502,42,0	0/0:19,0:19:57.18:0,57,797	0/0:14,0:14:42.14:0,42,604	1/1:2,29:31:84.26:1036,84,0	1/1:1,15:16:39.11:470,39,0	1/1:1,12:13:36.07:429,36,0	1/1:1,22:23:66.17:802,66,0	1/1:0,24:24:63.20:781,63,0	1/1:0,14:14:39.08:466,39,0	1/1:1,27:28:69.17:838,69,0	1/1:0,15:15:42.06:501,42,0	1/1:1,16:17:42.13:520,42,0	0/0:19,1:20:22.98:0,23,763	0/0:23,0:23:69.14:0,69,912	0/0:10,0:10:30.06:0,30,409
chr10	23501258	.	G	GAA	1878.06	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-3.285;DP=693;FS=2.922;HRun=6;HaplotypeScore=111.8747;InbreedingCoeff=0.9996;MQ=80.48;MQ0=0;MQRankSum=-4.276;QD=34.78;ReadPosRankSum=0.903;VQSLOD=2.9698;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:51.13:0,51,608	0/0:16,0:16:42.13:0,42,512	0/0:22,0:22:51.14:0,51,598	0/0:14,0:14:33.08:0,33,377	0/0:35,0:35:99:0,99,1207	0/0:32,0:32:87.25:0,87,1049	0/0:19,0:19:48.14:0,48,586	0/0:26,0:26:60.16:0,60,712	0/0:29,0:29:78.23:0,78,952	0/0:35,0:35:99:0,105,1281	0/0:24,0:24:66.19:0,66,793	0/0:27,0:27:66.19:0,66,805	0/0:31,0:31:87.27:0,87,1061	0/0:29,0:29:84.25:0,84,1012	1/1:3,25:28:66.19:1086,66,0	1/1:1,25:26:54.18:913,54,0	0/0:15,0:15:45.13:0,45,537	0/0:17,0:16:45.13:0,45,549	0/0:27,0:27:69.21:0,69,841	0/0:37,0:37:99:0,105,1281	0/0:21,0:21:60.17:0,60,719	0/0:26,0:26:78.23:0,78,938	0/0:22,0:22:63.18:0,63,756	0/0:16,0:16:45.14:0,45,548	0/0:34,0:34:90.24:0,90,1073	0/0:27,0:27:69.21:0,69,842	0/0:28,0:28:72.19:0,72,865	0/0:12,0:12:30.09:0,30,366
chr10	23501700	.	A	ATTT	3090.68	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=11.312;DP=697;FS=1.658;HRun=1;HaplotypeScore=137.0029;InbreedingCoeff=0.9599;MQ=77.84;MQ0=1;MQRankSum=-11.046;QD=49.06;ReadPosRankSum=1.101;VQSLOD=3.9627;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:48.16:0,48,840	0/0:12,0:12:33.07:0,33,549	0/0:17,0:17:45.15:0,45,764	0/0:20,0:20:47.88:0,48,823	0/0:32,0:32:93.28:0,93,1594	0/0:29,0:29:78.27:0,78,1372	0/0:15,0:15:36.11:0,36,606	0/0:42,0:42:99:0,117,2006	0/0:25,0:25:72.23:0,72,1239	0/0:41,0:40:99:0,123,2124	0/0:35,0:35:99:0,102,1704	0/0:26,0:26:69.24:0,69,1205	0/0:33,0:33:90.31:0,90,1581	0/0:24,0:24:72.25:0,72,1267	0/0:29,0:29:84.29:0,84,1471	0/0:33,0:33:99:0,99,1677	0/0:19,0:19:45.12:0,45,735	0/0:9,0:9:21.07:0,21,370	0/0:21,0:21:57.17:0,57,976	0/0:23,0:23:57.20:0,57,1006	0/0:28,0:28:78.25:0,78,1347	0/0:28,0:28:84.29:0,84,1482	0/0:32,0:32:96.33:0,96,1681	0/0:20,0:20:54.15:0,54,896	0/0:24,0:24:72.20:0,72,1229	1/1:9,17:26:58.90:1340,59,0	1/1:8,26:34:93.49:1768,93,0	1/1:0,1:2:6.02:118,6,0
chr10	23501702	.	G	GGTAA	3938.13	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=11.329;DP=691;FS=3.087;HRun=0;HaplotypeScore=147.9411;InbreedingCoeff=0.9591;MQ=78.09;MQ0=1;MQRankSum=-11.286;QD=65.64;ReadPosRankSum=1.846;VQSLOD=5.5465;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:48.15:0,48,967	0/0:12,0:12:33.11:0,33,683	0/0:18,0:18:48.16:0,48,960	0/0:20,0:20:54.17:0,54,1069	0/0:32,0:32:93.31:0,93,1893	0/0:29,0:29:78.27:0,78,1613	0/0:14,0:14:33.11:0,33,675	0/0:42,0:42:99:0,120,2331	0/0:25,0:25:72.24:0,72,1451	0/0:41,0:40:99:0,123,2492	0/0:34,0:34:99:0,99,2022	0/0:26,0:26:69.20:0,69,1320	0/0:34,0:34:90.29:0,90,1848	0/0:24,0:24:72.25:0,72,1505	0/0:30,0:30:84.27:0,84,1719	0/0:33,0:33:99:0,99,1953	0/0:18,0:18:42.12:0,42,837	0/0:9,0:9:21.07:0,21,440	0/0:19,0:19:54.19:0,54,1133	0/0:23,0:23:60.19:0,60,1220	0/0:28,0:28:75.26:0,75,1550	0/0:28,0:28:84.29:0,84,1761	0/0:32,0:32:96.32:0,96,1936	0/0:18,0:18:51.15:0,51,1030	0/0:25,0:25:72.25:0,72,1477	1/1:8,17:25:75.22:1723,75,0	1/1:6,25:31:90.31:2128,90,0	1/1:2,1:3:5.91:88,6,0
chr10	23501746	.	G	GACT	16067.37	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-14.582;DP=686;FS=4.591;HRun=0;HaplotypeScore=101.7769;InbreedingCoeff=0.9795;MQ=64.06;MQ0=1;MQRankSum=2.188;QD=32.86;ReadPosRankSum=3.245;VQSLOD=5.5041;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:14:35.73:0,36,480	1/1:0,10:10:27.09:554,27,0	0/0:25,0:21:26.70:0,27,416	0/0:25,0:23:41.41:0,41,557	1/1:8,23:31:54.19:1088,54,0	1/1:8,17:25:42.14:849,42,0	1/1:0,14:14:24.08:493,24,0	1/1:15,26:48:75.16:1299,75,0	1/1:13,14:28:33.11:677,33,0	1/1:3,30:33:87.27:1667,87,0	1/1:8,14:24:33.11:676,33,0	1/1:2,21:23:45.15:925,45,0	1/1:8,17:27:26.66:554,27,0	1/1:5,23:29:45.15:921,45,0	0/0:33,0:33:72.23:0,72,1107	0/0:28,0:28:72.22:0,72,1008	1/1:4,15:21:17.81:368,18,0	1/1:2,5:8:6.02:123,6,0	1/1:7,10:18:30.04:530,30,0	1/1:4,15:19:30.10:601,30,0	1/1:9,17:28:33.11:678,33,0	1/1:3,22:25:51.18:1048,51,0	1/1:6,22:29:53.85:1108,54,0	1/1:3,13:17:27.09:555,27,0	1/1:5,26:32:66.23:1354,66,0	0/0:28,0:30:81.16:0,81,1103	0/0:33,0:32:80.92:0,81,1080	0/0:8,0:8:24.08:0,24,349
chr10	23502029	.	G	GGT	7761.48	PASS	AB=0.938;AC=43;AF=0.768;AN=56;BaseQRankSum=-4.151;DP=330;FS=6.936;HRun=0;HaplotypeScore=78.1014;InbreedingCoeff=0.7243;MQ=80.96;MQ0=6;MQRankSum=-1.732;QD=31.17;ReadPosRankSum=0.620;VQSLOD=6.6602;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:7:18.01:0,18,199	1/1:3,3:3:6.02:112,6,0	0/0:16,0:13:23.23:0,23,314	0/0:26,0:19:25.16:0,25,245	1/1:9,8:16:14.45:457,14,0	1/1:11,2:12:27:342,27,0	1/1:1,4:5:6.02:112,6,0	1/1:4,29:36:90.47:1596,90,0	1/1:1,7:8:12.04:224,12,0	1/1:0,11:11:27.04:404,27,0	1/1:9,11:20:45.12:777,45,0	1/1:3,9:12:15.05:280,15,0	1/1:6,4:10:21.07:377,21,0	1/1:1,8:9:15.05:264,15,0	0/0:7,0:7:5.70:0,6,90	1/1:3,0:3:5.45:15,5,0	1/1:5,6:10:15.01:244,15,0	1/1:0,1:1:3.01:56,3,0	1/1:4,8:13:36:521,36,0	1/1:4,16:20:45.02:701,45,0	1/1:1,4:5:9.03:166,9,0	1/1:0,7:7:8.95:129,9,0	1/1:7,8:13:33.06:512,33,0	1/1:2,0:2:2.99:23,3,0	1/1:4,6:10:27.07:436,27,0	0/1:14,1:15:14.10:14,0,487	0/0:18,0:18:51.08:0,51,646	0/0:5,0:5:12.04:0,12,176
chr10	23502031	.	TATATATATAG	T	2388.42	PASS	AB=0.986;AC=38;AF=0.679;AN=56;BaseQRankSum=4.053;DP=307;FS=7.060;HRun=0;HaplotypeScore=126.1725;InbreedingCoeff=0.5573;MQ=80.97;MQ0=7;MQRankSum=-2.008;QD=10.52;ReadPosRankSum=1.760;VQSLOD=1.7998;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:6:18.01:0,18,257	1/1:5,1:3:5.23:43,5,0	0/0:14,0:12:22.78:0,23,480	0/0:25,0:16:22.69:0,23,312	0/1:16,1:16:0.12:148,0,0	1/1:9,2:10:25.95:233,26,0	1/1:4,0:4:4.07:11,4,0	0/1:36,0:35:99:214,0,103	1/1:6,1:7:9.66:45,10,0	1/1:11,0:11:18.82:170,19,0	1/1:18,1:19:33.52:195,34,0	1/1:8,2:10:11.05:41,11,0	1/1:7,3:10:18.27:169,18,0	1/1:8,0:8:12.58:139,13,0	0/0:7,0:7:18.01:0,18,192	0/0:3,0:3:9.03:0,9,130	1/1:6,0:5:10.07:45,10,0	1/1:1,0:1:2.68:11,3,0	0/1:12,0:12:10.06:283,0,10	1/1:20,0:20:36.72:297,37,0	1/1:4,0:4:6:17,6,0	1/1:7,0:7:7:28,7,0	1/1:13,0:11:28.31:203,28,0	1/1:1,0:1:2.99:23,3,0	1/1:9,1:10:21.96:219,22,0	0/1:14,0:14:42.55:43,0,511	0/0:19,0:19:10.44:0,10,769	0/0:5,0:5:12.04:0,12,265
chr10	23502042	.	GTATATATATATATATATATA	G	1504.50	PASS	AB=0.909;AC=19;AF=0.594;AN=32;BaseQRankSum=4.034;DP=232;FS=1.363;HRun=0;HaplotypeScore=144.2583;InbreedingCoeff=0.3940;MQ=67.70;MQ0=9;MQRankSum=-2.357;QD=14.06;ReadPosRankSum=1.693;VQSLOD=2.6990;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	1/1:7,0:4:3:28,3,0	./.	0/0:17,0:8:2.60:0,3,10	1/1:16,0:15:2.16:23,2,0	./.	./.	0/0:29,0:27:18.05:0,18,228	0/0:6,0:6:2.99:0,3,24	0/0:6,0:6:3.01:0,3,46	0/0:16,0:16:6.47:0,6,74	./.	./.	1/1:6,0:6:3.01:93,3,0	./.	./.	1/1:6,0:4:0.47:1,0,0	0/0:0,0:1:2.94:0,3,18	0/1:9,0:10:59.40:198,0,59	1/1:14,0:15:5.05:152,5,0	./.	./.	1/1:10,0:8:2.90:16,3,0	./.	1/1:10,0:10:11.73:157,12,0	1/1:8,4:12:12.04:637,12,0	1/1:9,6:15:6.02:318,6,0	./.
chr10	23502082	.	ATATGTGTGTGTGTGTG	A	2027.24	PASS	AB=0.821;AC=23;AF=0.575;AN=40;BaseQRankSum=4.927;DP=168;FS=1.083;HRun=0;HaplotypeScore=89.1176;InbreedingCoeff=0.4243;MQ=38.55;MQ0=6;MQRankSum=-2.509;QD=18.26;ReadPosRankSum=3.718;VQSLOD=1.4929;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:1,0:1:0:0,0,0	1/1:1,3:4:3.01:116,3,0	./.	./.	0/1:3,11:14:0:0,0,0	0/1:10,0:10:0:0,0,0	./.	0/0:19,0:18:0:0,0,1	./.	1/1:6,0:6:15.05:518,15,0	0/1:2,10:12:0:0,0,0	./.	1/1:7,0:7:3.01:116,3,0	1/1:3,0:2:3.01:115,3,0	0/0:5,0:5:12.04:0,12,313	0/0:2,0:2:3.01:0,3,80	0/0:4,0:2:0.89:0,1,2	1/1:3,0:3:3.01:83,3,0	1/1:10,0:9:5.24:383,5,0	1/1:12,0:11:2.88:111,3,0	./.	./.	1/1:0,5:5:3.01:142,3,0	./.	1/1:2,8:10:12.04:556,12,0	0/1:14,0:14:0.62:1,0,1336	0/0:10,0:10:3.80:0,4,516	0/0:5,0:5:12.04:0,12,570
chr10	23502084	.	ATGTGTGTGTGTGTG	A	1837.71	PASS	AC=18;AF=0.563;AN=32;BaseQRankSum=4.297;DP=174;FS=2.454;HRun=0;HaplotypeScore=88.5552;InbreedingCoeff=0.5485;MQ=38.66;MQ0=6;MQRankSum=-2.536;QD=30.13;ReadPosRankSum=3.627;VQSLOD=2.0197;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	1/1:4,0:4:3.01:116,3,0	./.	./.	./.	./.	./.	0/0:18,0:18:0:0,0,0	./.	1/1:1,6:7:18.05:543,18,0	./.	./.	1/1:3,4:7:3.01:116,3,0	1/1:3,0:2:3.01:100,3,0	0/0:5,0:5:12.04:0,12,313	0/0:3,0:3:6.02:0,6,159	0/0:4,0:2:0.89:0,1,2	1/1:1,0:3:3.01:83,3,0	1/1:6,0:9:0.46:352,0,0	1/1:5,0:11:3.01:97,3,0	./.	./.	1/1:5,0:5:3.01:109,3,0	./.	1/1:10,0:10:12.04:443,12,0	0/0:15,0:15:36.12:0,36,1528	0/0:10,0:10:15.05:0,15,547	0/0:5,0:5:12.04:0,12,541
chr10	23502274	.	GTATCTATCAATC	G	9498.63	PASS	AB=1.000;AC=42;AF=0.778;AN=54;BaseQRankSum=2.410;DP=458;FS=17.340;HRun=0;HaplotypeScore=150.9234;InbreedingCoeff=0.6404;MQ=65.45;MQ0=3;MQRankSum=-6.220;QD=25.06;ReadPosRankSum=-0.667;VQSLOD=2.9811;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:20:6.02:180,6,0	1/1:2,6:8:9.03:326,9,0	0/0:20,0:12:12.50:0,12,201	0/0:8,0:4:11.98:0,12,129	1/1:2,24:26:17.88:490,18,0	1/1:1,14:15:15.05:543,15,0	1/1:2,12:14:9.03:326,9,0	1/1:29,0:29:75.06:703,75,0	1/1:2,12:15:9.03:308,9,0	1/1:3,17:20:51.09:1133,51,0	1/1:0,27:27:30.02:995,30,0	1/1:2,12:14:9.03:326,9,0	1/1:3,14:16:9.03:327,9,0	1/1:1,13:14:21.07:762,21,0	0/0:20,0:18:39.04:0,39,727	0/0:14,0:14:30.09:0,30,768	1/1:8,0:8:5.30:38,5,0	1/1:13,0:13:26.76:194,27,0	1/1:3,0:10:18.50:350,18,0	1/1:2,0:17:8.98:195,9,0	./.	1/1:0,10:10:18.06:653,18,0	1/1:3,0:19:17.41:521,17,0	1/1:10,0:11:8.93:66,9,0	1/1:1,14:15:15.05:544,15,0	0/1:34,0:32:99:297,0,277	0/1:23,0:22:99:219,0,199	0/0:4,0:4:8.95:0,9,69
chr10	23502283	.	AATCTATCTATCTATCTATCT	A	2140.10	PASS	AB=1.000;AC=11;AF=0.220;AN=50;BaseQRankSum=-1.587;DP=420;FS=2.906;HRun=0;HaplotypeScore=205.3632;InbreedingCoeff=0.4916;MQ=65.44;MQ0=4;MQRankSum=-2.056;QD=16.59;ReadPosRankSum=0.234;VQSLOD=2.7976;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:17:5.82:96,6,0	0/0:7,0:7:9.02:0,9,96	0/0:19,0:11:2.99:0,3,23	0/0:8,0:4:0:0,0,0	0/0:24,0:24:17.99:0,18,235	0/0:14,0:13:15.04:0,15,160	0/0:13,0:13:9.02:0,9,96	0/0:25,0:25:27.05:0,27,405	0/1:14,0:14:38.89:39,0,55	0/0:17,0:17:45.11:0,45,676	0/0:27,0:27:27.06:0,27,279	0/0:12,0:12:9.02:0,9,96	0/0:16,0:15:8.98:0,9,83	0/0:13,0:13:21.05:0,21,219	0/0:7,0:17:27.09:0,27,1356	0/0:2,0:12:27.09:0,27,1600	./.	0/0:12,0:12:3.01:0,3,50	0/1:8,0:8:63.59:120,0,64	0/1:15,0:15:9.97:83,0,10	./.	0/0:10,0:10:18.05:0,18,190	1/1:17,0:16:17.89:272,18,0	0/0:8,0:8:5.93:0,6,43	0/0:14,0:14:15.04:0,15,160	1/1:10,22:30:41.73:1043,42,0	1/1:11,14:24:12.04:641,12,0	./.
chr10	23502731	.	AAAT	A	1980.45	PASS	AB=0.509;AC=3;AF=0.054;AN=56;BaseQRankSum=9.146;DP=658;FS=0.571;HRun=0;HaplotypeScore=86.2692;InbreedingCoeff=0.6887;MQ=78.97;MQ0=0;MQRankSum=-2.525;QD=36.01;ReadPosRankSum=2.897;VQSLOD=4.2896;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:51.18:0,51,1123	0/0:14,0:14:39.11:0,39,787	0/0:19,0:19:48.15:0,48,962	0/0:11,0:11:30.01:0,30,557	0/0:30,0:30:87.30:0,87,1921	0/0:24,0:24:72.25:0,72,1579	0/0:18,0:18:51.16:0,51,1095	0/0:29,0:29:81.28:0,81,1793	0/0:18,1:19:8.18:0,8,1093	0/0:37,0:37:99:0,108,2282	0/0:54,0:54:99:0,157,3444	0/0:16,0:16:42.13:0,42,895	0/0:25,0:25:75.26:0,75,1675	0/0:24,0:24:66.21:0,66,1416	1/1:0,28:28:75.26:1225,75,0	0/1:1,26:27:6.84:862,0,7	0/0:14,0:14:42.14:0,42,920	0/0:12,0:12:30.10:0,30,620	0/0:27,0:27:69.21:0,69,1458	0/0:33,0:33:90.31:0,90,2009	0/0:16,0:16:48.15:0,48,1029	0/0:20,0:20:60.21:0,60,1338	0/0:30,0:30:81.26:0,81,1751	0/0:8,0:8:21.07:0,21,469	0/0:19,0:19:54.19:0,54,1192	0/0:26,0:26:72.24:0,72,1553	0/0:44,0:44:99:0,129,2751	0/0:16,0:16:36.05:0,36,606
chr10	23504429	.	A	AAAAAC	2313.27	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=-4.740;DP=592;FS=1.444;HRun=0;HaplotypeScore=112.3049;InbreedingCoeff=0.8050;MQ=74.44;MQ0=2;MQRankSum=-1.117;QD=26.59;ReadPosRankSum=1.242;VQSLOD=3.1283;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:73.49:0,73,1363	0/0:15,0:15:36.12:0,36,680	0/1:27,0:20:15.68:16,0,290	0/0:26,0:20:20.40:0,20,306	0/0:29,0:29:63.22:0,63,1167	0/0:25,0:25:57.18:0,57,1045	0/0:15,0:15:36.11:0,36,632	0/0:30,0:30:57.18:0,57,1016	0/0:18,0:18:42.14:0,42,793	0/0:26,0:26:54.19:0,54,1007	0/0:18,0:18:45.15:0,45,820	0/0:5,0:5:12.04:0,12,227	0/0:15,0:15:30.07:0,30,516	0/0:12,0:12:30.05:0,30,469	0/0:21,0:21:54.18:0,54,997	0/0:14,0:14:39.12:0,39,706	0/0:29,0:29:72.23:0,72,1328	0/0:26,0:26:66.21:0,66,1160	0/0:22,0:22:39.13:0,39,737	0/0:28,0:28:66.23:0,66,1233	0/0:9,0:9:15.05:0,15,274	0/0:18,0:18:42.14:0,42,757	0/0:26,0:26:69.21:0,69,1241	0/0:13,0:13:24.55:0,25,420	0/0:29,0:29:66.19:0,66,1175	1/1:9,15:24:42.12:1144,42,0	1/1:8,19:30:36.12:1037,36,0	1/1:0,6:6:9.03:260,9,0
chr10	23506901	.	CTGTGTGTGTGTGTGTGTGTG	C	348.29	PASS	AB=0.748;AC=6;AF=0.125;AN=48;BaseQRankSum=3.989;DP=401;FS=34.868;HRun=0;HaplotypeScore=178.3655;InbreedingCoeff=0.2794;MQ=67.10;MQ0=18;MQRankSum=-3.840;QD=6.22;ReadPosRankSum=-1.612;VQSLOD=1.0259;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:17:2.99:24,3,0	./.	./.	./.	0/0:13,0:13:12.04:0,12,454	0/0:18,0:17:24.55:0,25,939	0/0:15,0:14:9.03:0,9,231	0/0:24,0:23:11.26:0,11,79	0/0:14,0:14:30.07:0,30,937	0/0:9,0:9:9.30:0,9,210	0/0:8,0:9:12.03:0,12,337	0/0:4,0:3:2.99:0,3,24	0/0:10,0:10:9.92:0,10,356	0/0:9,0:9:6.02:0,6,224	1/1:8,4:11:5.51:121,6,0	0/1:11,4:14:85.79:305,0,86	0/0:24,0:23:30.09:0,30,1039	0/0:12,0:12:18.06:0,18,531	0/0:10,0:9:3:0,3,26	0/0:9,0:9:9.03:0,9,332	0/0:36,0:33:27.07:0,27,758	0/0:4,0:3:3.01:0,3,121	0/0:10,0:9:9.03:0,9,356	0/0:14,0:14:12.04:0,12,455	0/0:12,0:12:12.03:0,12,401	0/0:16,0:16:12.03:0,12,198	0/1:7,0:11:7.44:7,0,75	./.
chr10	23507067	.	T	TA	1999.27	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-9.237;DP=477;FS=5.131;HRun=4;HaplotypeScore=45.6042;InbreedingCoeff=0.9893;MQ=71.74;MQ0=0;MQRankSum=-0.051;QD=35.07;ReadPosRankSum=0.678;VQSLOD=3.9760;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:54.15:0,54,612	0/0:12,0:12:33.09:0,33,374	0/0:10,0:10:27.01:0,27,275	0/0:9,0:8:18.05:0,18,199	0/0:30,0:30:81.21:0,81,909	0/0:15,0:14:45.11:0,45,500	0/0:12,0:12:33.09:0,33,374	0/0:30,0:30:87.22:0,87,969	0/0:17,0:17:45.13:0,45,510	0/0:24,0:24:63.17:0,63,708	0/0:32,0:32:90.21:0,90,990	0/0:9,0:9:27.07:0,27,298	0/0:18,0:18:51.12:0,51,560	0/0:11,0:11:33.08:0,33,365	0/0:9,0:9:18.03:0,18,194	0/0:15,0:15:45.13:0,45,510	0/0:17,0:18:36.41:0,36,518	0/0:10,0:10:24.04:0,24,253	0/0:7,0:7:21.06:0,21,238	0/0:35,0:35:99:0,102,1157	0/0:9,0:9:27.01:0,27,280	0/0:12,0:12:30.09:0,30,340	0/0:23,0:23:66.19:0,66,748	0/0:8,0:8:24.07:0,24,272	0/0:27,0:27:75.20:0,75,842	1/1:1,19:20:26.16:746,26,0	1/1:1,22:23:63.21:862,63,0	1/1:0,14:14:42.08:535,42,0
chr10	23507636	.	G	GT	842	PASS	AB=0.958;AC=8;AF=0.143;AN=56;BaseQRankSum=-4.761;DP=459;FS=4.412;HRun=9;HaplotypeScore=44.0922;InbreedingCoeff=0.7637;MQ=77.85;MQ0=0;MQRankSum=0.391;QD=12.03;ReadPosRankSum=0.418;VQSLOD=2.4419;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:38.99:0,39,338	0/0:11,0:11:26.97:0,27,231	0/0:13,0:13:29.99:0,30,259	0/1:7,0:7:1.07:1,0,26	0/0:28,0:28:77.97:0,78,677	0/0:24,0:24:65.97:0,66,573	0/0:14,0:14:32.95:0,33,283	0/0:34,0:34:77.96:0,78,675	0/0:13,0:13:38.98:0,39,334	0/0:14,0:14:32.98:0,33,286	0/0:34,0:34:92.93:0,93,800	0/0:18,0:18:50.99:0,51,443	0/0:21,0:21:59.94:0,60,514	0/0:18,0:18:38.97:0,39,339	0/0:6,0:6:15:0,15,130	0/0:20,0:20:56.96:0,57,491	0/0:13,0:13:35.94:0,36,302	0/0:10,0:10:29.99:0,30,260	0/1:20,2:22:9.28:9,0,385	0/0:19,0:19:56.97:0,57,490	0/0:12,0:12:20.98:0,21,182	0/0:12,0:12:32.98:0,33,283	0/0:6,0:7:19.83:0,20,149	0/0:14,0:14:41.99:0,42,365	0/0:18,0:18:50.94:0,51,433	1/1:2,17:19:51.10:546,51,0	1/1:4,9:13:18.01:199,18,0	1/1:1,8:9:21.06:232,21,0
chr10	23510067	.	GTC	G	740.52	PASS	AB=0.955;AC=12;AF=0.214;AN=56;BaseQRankSum=1.575;DP=622;FS=0.962;HRun=0;HaplotypeScore=194.9569;InbreedingCoeff=0.4593;MQ=50.09;MQ0=16;MQRankSum=-3.550;QD=4.81;ReadPosRankSum=-5.702;VQSLOD=1.6284;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,0:7:5.85:34,6,0	0/0:5,0:5:8.94:0,9,73	0/0:44,0:14:37.29:0,37,377	0/0:54,0:16:3.59:0,4,220	0/0:26,0:26:47.94:0,48,449	0/0:31,0:30:4.38:0,4,408	0/0:16,0:16:14.83:0,15,120	0/1:19,2:21:99:127,0,274	0/0:19,0:19:22.22:0,22,280	0/0:23,0:23:49.86:0,50,553	0/0:24,0:24:23.14:0,23,279	0/1:21,1:22:10.71:11,0,263	0/0:17,0:17:17.50:0,17,175	0/0:17,0:15:27.45:0,27,289	0/0:23,0:22:30.80:0,31,816	0/0:22,0:22:48.11:0,48,812	0/0:14,0:14:21.02:0,21,220	0/0:20,0:19:18.63:0,19,272	0/0:8,0:6:14.90:0,15,120	0/0:27,0:27:17.17:0,17,459	0/1:18,1:18:42.03:42,0,124	0/0:30,0:29:5.65:0,6,429	0/1:22,0:22:21.57:22,0,278	0/0:26,0:25:32.92:0,33,337	0/0:21,0:21:13.57:0,14,172	1/1:26,0:26:11.57:298,12,0	1/1:25,0:23:40.35:303,40,0	1/1:10,0:8:13.74:68,14,0
chr10	23510077	.	CTGTG	C	1618.04	PASS	AB=0.996;AC=18;AF=0.321;AN=56;BaseQRankSum=0.936;DP=578;FS=0.476;HRun=0;HaplotypeScore=210.0858;InbreedingCoeff=0.1636;MQ=47.33;MQ0=18;MQRankSum=-4.435;QD=6.40;ReadPosRankSum=-6.101;VQSLOD=0.7404;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:10,0:8:8.60:51,9,0	0/0:5,0:5:5.70:0,6,43	0/0:43,0:11:18.99:0,19,256	0/0:51,0:12:5.92:0,6,281	0/0:24,0:24:38.47:0,38,499	0/1:26,1:26:32.45:32,0,245	0/1:13,0:13:13.99:14,0,18	0/1:20,0:19:47.47:107,0,47	0/1:20,0:20:3:3,0,229	0/1:24,0:24:36.47:36,0,455	0/0:23,0:23:18.61:0,19,260	0/0:23,0:23:22.85:0,23,297	0/1:14,0:14:2.49:2,0,128	0/0:14,0:12:15.51:0,16,176	0/0:20,0:19:34.57:0,35,587	0/0:21,0:21:21.14:0,21,586	0/0:13,0:13:6.49:0,6,238	0/1:17,0:16:2.52:3,0,406	0/1:8,0:6:12.77:13,0,87	0/0:26,0:26:4.51:0,5,476	0/0:15,0:14:12.14:0,12,228	0/0:23,0:23:25.96:0,26,339	0/1:17,0:17:15.72:16,0,95	0/0:24,0:23:30.21:0,30,376	0/1:20,0:20:32.51:33,0,110	1/1:17,9:26:8.43:730,8,0	1/1:17,10:25:50.56:610,51,0	1/1:8,2:8:14.91:137,15,0
chr10	23510085	.	GTGTT	G	615.46	PASS	AB=0.972;AC=7;AF=0.125;AN=56;BaseQRankSum=3.536;DP=538;FS=6.810;HRun=0;HaplotypeScore=209.8272;InbreedingCoeff=0.2123;MQ=46.60;MQ0=17;MQRankSum=-5.571;QD=6.03;ReadPosRankSum=-0.407;VQSLOD=1.6495;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:10,0:8:4.60:5,0,6	0/0:5,0:5:14.79:0,15,138	0/0:40,0:9:25.56:0,26,397	0/0:42,0:11:7.81:0,8,349	0/0:24,0:24:54.66:0,55,744	0/0:25,0:24:3.52:0,4,401	0/0:13,0:13:24.88:0,25,162	0/0:19,0:18:19.29:0,19,231	0/0:19,0:19:37.65:0,38,450	0/0:24,0:24:58.39:0,58,805	0/0:22,0:21:23.49:0,23,443	0/0:21,0:21:36.04:0,36,542	0/0:13,0:13:18.35:0,18,253	0/0:12,0:11:23.43:0,23,307	0/0:19,0:18:41.48:0,41,839	0/0:21,0:21:37.01:0,37,780	0/0:10,0:10:21.37:0,21,332	0/0:17,0:16:15.80:0,16,555	0/0:8,0:6:12.97:0,13,198	0/0:24,0:24:33.44:0,33,752	0/0:15,0:14:24.58:0,25,344	0/0:21,0:21:35.22:0,35,502	0/1:13,1:14:7.47:7,0,135	0/0:22,0:22:35.12:0,35,567	0/1:20,0:20:17.20:17,0,234	0/1:23,2:25:54.22:441,0,54	1/1:24,1:24:17.60:251,18,0	0/1:8,0:6:17.26:21,0,17
chr10	23510092	.	TGAGAGAGAGAGAGAGAGA	T	3403.84	PASS	AB=0.957;AC=38;AF=0.731;AN=52;BaseQRankSum=-1.561;DP=488;FS=21.855;HRun=0;HaplotypeScore=266.9574;InbreedingCoeff=-0.0894;MQ=46.09;MQ0=18;MQRankSum=-0.965;QD=8.86;ReadPosRankSum=-2.997;VQSLOD=0.3738;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,0:8:3:29,3,0	0/1:6,0:5:17.08:157,0,17	./.	./.	0/1:20,0:20:29.90:113,0,30	0/1:20,1:21:99:182,0,100	1/1:14,0:13:11.98:122,12,0	1/1:8,11:18:21.42:256,21,0	1/1:17,0:17:5.94:287,6,0	1/1:23,0:23:24.03:535,24,0	1/1:22,0:21:12.22:102,12,0	1/1:17,0:17:0.29:73,0,0	1/1:10,0:10:8:141,8,0	0/1:11,0:10:34.79:88,0,35	0/1:16,1:16:73.41:73,0,101	0/1:12,0:20:10.03:109,0,10	1/1:9,0:9:5.59:33,6,0	1/1:14,0:13:17.41:287,17,0	0/1:10,0:8:3.95:77,0,4	0/1:19,0:19:7.76:268,0,8	1/1:13,0:12:2.97:20,3,0	0/1:18,0:18:64.11:117,0,64	1/1:12,0:12:11.80:118,12,0	1/1:21,0:21:4.04:11,4,0	1/1:18,0:18:12.40:136,12,0	0/1:22,0:22:69.90:70,0,394	0/0:23,0:22:33.08:0,33,510	0/0:7,0:5:5.97:0,6,55
chr10	23510141	.	GAGAGAC	G	656.32	PASS	AB=0.980;AC=16;AF=0.286;AN=56;BaseQRankSum=5.751;DP=469;FS=0.000;HRun=0;HaplotypeScore=158.0060;InbreedingCoeff=-0.1836;MQ=40.94;MQ0=18;MQRankSum=-3.898;QD=3.01;ReadPosRankSum=-0.285;VQSLOD=2.5208;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:9,0:9:13.13:34,0,13	0/1:5,0:5:7.29:7,0,25	0/1:27,0:10:20.41:20,0,210	0/0:56,0:7:0.07:0,0,1	0/0:10,0:10:0.66:0,1,3	0/1:15,0:14:11.10:47,0,11	0/0:10,0:9:0.72:0,1,40	0/0:25,0:23:29.97:0,30,190	0/1:13,0:13:16.25:16,0,109	0/0:20,0:18:41.30:0,41,187	1/1:12,0:10:3.19:7,3,0	0/0:12,0:12:6.20:0,6,37	0/0:16,0:16:3.60:0,4,24	0/0:17,0:17:1.43:0,1,9	0/0:18,0:17:17.18:0,17,689	0/0:19,0:19:26.07:0,26,605	0/0:9,0:8:7.86:0,8,63	0/1:10,0:10:22.13:22,0,39	0/0:10,0:8:18.01:0,18,102	0/0:9,0:9:0.03:0,0,73	0/1:20,0:16:2.80:3,0,45	0/0:20,0:19:5.35:0,5,31	0/1:16,0:16:12:12,0,17	0/1:26,0:25:7.37:7,0,59	0/1:17,0:16:10.12:10,0,17	0/1:16,3:19:99:325,0,121	0/1:22,3:24:27.36:263,0,27	1/1:4,0:3:1.75:19,2,0
chr10	23510144	.	AGAC	A	326.93	PASS	AB=0.970;AC=17;AF=0.304;AN=56;BaseQRankSum=7.955;DP=492;FS=8.824;HRun=0;HaplotypeScore=151.4031;InbreedingCoeff=-0.2919;MQ=44.44;MQ0=18;MQRankSum=-5.410;QD=1.47;ReadPosRankSum=-0.578;VQSLOD=2.1873;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:6,3:9:16.82:62,0,17	0/1:6,0:6:22.79:23,0,128	0/0:31,0:10:15.12:0,15,305	0/0:62,0:11:13.07:0,13,88	0/0:14,0:14:13.86:0,14,197	0/1:14,1:14:52.89:53,0,63	0/1:10,0:9:11.45:11,0,98	0/0:25,0:23:45.14:0,45,648	0/1:14,0:14:44.44:44,0,235	0/1:22,0:20:99:102,0,653	0/1:14,0:12:7.60:8,0,87	0/1:11,1:12:13.70:14,0,132	1/1:18,0:18:5.14:24,5,0	0/0:17,1:18:2.48:0,2,44	0/0:20,0:19:47.31:0,47,947	0/0:18,0:18:33.02:0,33,748	0/1:9,0:8:30.93:31,0,82	0/1:10,0:10:50.39:50,0,145	0/0:10,0:8:19:0,19,306	0/1:9,0:9:21.59:22,0,169	0/1:21,0:17:0.23:0,0,68	0/1:19,0:18:21.30:21,0,36	0/0:15,1:16:6.04:0,6,91	0/0:22,3:24:5.34:0,5,135	0/1:15,1:16:8.24:8,0,61	0/1:18,0:18:3.14:3,0,651	0/0:23,0:22:13.86:0,14,371	0/0:4,0:3:5.93:0,6,64
chr10	23510155	.	CAG	C	45.12	PASS	AB=0.964;AC=6;AF=0.107;AN=56;BaseQRankSum=5.578;DP=536;FS=8.764;HRun=0;HaplotypeScore=134.5229;InbreedingCoeff=-0.0274;MQ=56.38;MQ0=23;MQRankSum=-2.999;QD=0.67;ReadPosRankSum=-2.358;VQSLOD=1.2612;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:10,0:10:8.63:9,0,76	0/0:6,0:6:11.84:0,12,172	0/0:60,0:25:49.36:0,49,656	0/0:90,0:24:1.36:0,1,195	0/0:16,0:16:14.88:0,15,197	0/1:20,0:19:19.38:19,0,20	0/0:10,0:9:8.67:0,9,142	0/0:23,0:22:54.09:0,54,747	0/0:10,0:10:1.62:0,2,239	0/0:19,0:17:51.15:0,51,815	0/0:14,1:14:5.63:0,6,102	0/0:14,0:13:8.09:0,8,150	0/0:19,0:19:0.46:0,0,1	0/0:16,0:16:2.42:0,2,49	0/0:20,0:19:51.17:0,51,848	0/0:19,0:19:33.11:0,33,556	0/0:9,0:8:8.89:0,9,119	0/0:10,0:10:2.07:0,2,125	0/0:6,0:4:9.03:0,9,151	0/0:11,0:10:12.70:0,13,250	0/0:23,0:19:1.27:0,1,49	0/0:20,0:18:3.01:0,3,51	0/0:12,0:12:6.02:0,6,102	0/0:25,0:23:7.42:0,7,151	0/0:13,0:13:5.95:0,6,69	0/1:17,0:17:41.33:41,0,130	0/1:15,3:18:28.87:77,0,29	1/1:2,0:1:0.89:2,1,0
chr10	23510186	.	AAGAGCAGAGC	A	3769.60	PASS	AB=0.990;AC=41;AF=0.732;AN=56;BaseQRankSum=2.698;DP=686;FS=0.500;HRun=0;HaplotypeScore=194.3526;InbreedingCoeff=-0.0008;MQ=69.05;MQ0=31;MQRankSum=-1.979;QD=7.14;ReadPosRankSum=1.786;VQSLOD=2.3500;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:13:16.51:143,17,0	1/1:6,0:6:6.45:84,6,0	0/1:99,0:42:26.95:27,0,782	0/0:133,0:54:22.34:0,22,894	1/1:22,0:21:16.95:230,17,0	1/1:1,16:16:5.97:78,6,0	1/1:8,0:8:20.39:219,20,0	0/0:23,0:19:0.95:0,1,56	1/1:10,0:10:7.35:20,7,0	0/1:24,0:23:59.59:91,0,60	0/1:15,0:16:4.72:20,0,5	1/1:17,0:16:22.18:281,22,0	0/1:27,0:26:3.27:58,0,3	1/1:25,0:22:6.20:112,6,0	0/1:28,0:27:99:193,0,204	0/1:19,0:18:43.13:43,0,275	0/1:13,0:12:4.98:5,0,23	0/1:10,0:10:3.26:97,0,3	0/1:6,0:5:13.04:24,0,13	0/1:13,0:13:10.37:10,0,41	1/1:18,0:17:12.10:47,12,0	1/1:27,0:26:13.14:130,13,0	0/1:22,0:19:0.94:97,0,1	1/1:22,0:20:9.65:104,10,0	1/1:22,0:21:13.21:230,13,0	1/1:20,0:19:51.96:779,52,0	1/1:16,0:16:31.73:367,32,0	1/1:5,0:5:15.05:280,15,0
chr10	23510191	.	CAGAGCAGAGA	C	5147.48	PASS	AB=0.995;AC=45;AF=0.804;AN=56;BaseQRankSum=0.703;DP=671;FS=11.073;HRun=0;HaplotypeScore=184.5491;InbreedingCoeff=-0.0363;MQ=68.04;MQ0=34;MQRankSum=-1.028;QD=8.86;ReadPosRankSum=4.658;VQSLOD=2.9646;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:13:13.61:92,14,0	1/1:6,0:6:17.75:195,18,0	0/0:89,0:37:21.61:0,22,398	0/1:125,0:50:8.37:8,0,380	1/1:20,3:22:38.54:494,39,0	1/1:16,0:15:3.01:39,3,0	1/1:8,0:8:16.03:99,16,0	1/1:22,0:17:41.71:308,42,0	1/1:11,0:11:27.24:238,27,0	0/1:27,0:25:33.03:310,0,33	0/1:18,0:18:76.04:76,0,83	1/1:15,2:16:36.23:516,36,0	1/1:2,25:26:4.83:81,5,0	1/1:3,23:23:6.96:147,7,0	0/1:29,0:28:99:321,0,207	0/1:19,1:19:99:187,0,273	0/1:12,0:11:27.07:27,0,73	0/1:10,0:10:54.13:63,0,54	1/1:6,0:5:8.90:66,9,0	0/1:13,0:13:61.32:94,0,61	0/1:19,0:18:6.99:64,0,7	1/1:2,25:26:18.10:226,18,0	1/1:2,20:19:13.78:174,14,0	1/1:21,1:20:20.13:196,20,0	1/1:0,22:21:14.97:326,15,0	1/1:20,0:19:26.18:423,26,0	1/1:15,0:15:23.77:203,24,0	1/1:5,0:5:14.99:176,15,0
chr10	23510192	.	AGAGC	A	158.61	PASS	AB=0.912;AC=7;AF=0.125;AN=56;BaseQRankSum=5.779;DP=667;FS=27.905;HRun=0;HaplotypeScore=164.1921;InbreedingCoeff=-0.0048;MQ=68.24;MQ0=34;MQRankSum=-1.278;QD=1.30;ReadPosRankSum=-4.937;VQSLOD=-0.5323;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:13,0:13:7.45:7,0,43	0/0:6,0:6:4.70:0,5,79	0/0:88,0:36:41.28:0,41,1189	0/0:119,0:49:40.02:0,40,1264	0/0:23,0:22:11.61:0,12,162	0/0:16,0:15:2.60:0,3,10	0/0:8,0:8:9.40:0,9,41	0/0:22,0:17:49.64:0,50,322	0/0:11,0:11:15.70:0,16,88	0/1:27,0:25:7.10:7,0,258	0/0:18,0:18:18:0,18,94	0/0:16,0:15:6.48:0,6,89	0/0:27,0:26:0.41:0,0,10	0/0:26,0:23:2.74:0,3,38	0/0:29,0:28:23.58:0,24,330	0/0:20,0:19:36.02:0,36,375	0/0:12,0:11:17.22:0,17,98	0/0:10,0:10:5.90:0,6,75	0/0:6,0:5:6.96:0,7,64	0/0:13,0:13:26.48:0,26,175	0/1:19,0:18:4.96:5,0,70	0/0:27,0:26:10.94:0,11,58	0/0:22,0:19:11.38:0,11,66	0/0:22,0:20:19.35:0,19,105	0/1:22,0:21:0.69:1,0,7	0/1:17,3:19:53.96:103,0,54	0/1:14,2:16:9.25:84,0,9	0/1:2,3:5:1.49:62,0,1
chr10	23510243	.	GAGA	G	1694.22	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=6.133;DP=652;FS=29.139;HRun=0;HaplotypeScore=115.2863;InbreedingCoeff=0.9967;MQ=55.74;MQ0=31;MQRankSum=-2.113;QD=26.89;ReadPosRankSum=3.091;VQSLOD=1.9493;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:33.11:0,33,487	0/0:11,0:11:24.15:0,24,304	0/0:30,0:17:49.16:0,49,601	0/0:27,0:12:31.46:0,31,398	0/0:30,0:29:74.73:0,75,889	0/0:30,0:28:54.18:0,54,774	0/0:17,0:16:48.16:0,48,721	0/0:42,0:22:66.22:0,66,904	0/0:12,0:12:30.88:0,31,388	0/0:28,0:26:73.45:0,73,943	0/0:29,0:29:70.36:0,70,983	0/0:17,0:16:30.29:0,30,354	0/0:27,0:25:35.98:0,36,466	0/0:24,0:21:32.91:0,33,383	0/0:31,0:30:84.26:0,84,1358	0/0:15,0:14:42.14:0,42,752	0/0:21,0:21:39.92:0,40,740	0/0:13,0:13:33.09:0,33,504	0/0:20,0:11:33.08:0,33,432	0/0:32,0:32:85.83:0,86,1209	0/0:23,0:23:62.89:0,63,877	0/0:27,0:25:43.26:0,43,534	0/0:21,0:17:30.01:0,30,393	0/0:20,0:19:39.80:0,40,457	0/0:24,0:23:36.47:0,36,411	1/1:21,4:24:54.74:966,55,0	1/1:23,2:24:45.56:564,46,0	1/1:10,3:12:21.07:307,21,0
chr10	23510246	.	A	AAG	1889.34	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=5.291;DP=654;FS=25.608;HRun=0;HaplotypeScore=102.2540;InbreedingCoeff=0.9473;MQ=59.18;MQ0=29;MQRankSum=-2.265;QD=27.38;ReadPosRankSum=3.038;VQSLOD=2.6578;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:33.11:0,33,451	0/0:11,0:11:33.09:0,33,428	0/0:31,0:18:48.52:0,49,603	0/0:30,0:15:38.79:0,39,481	0/0:28,0:27:75.25:0,75,1011	0/0:29,0:27:54.18:0,54,738	0/0:16,0:16:48.16:0,48,649	0/0:42,0:23:69.23:0,69,943	0/0:12,0:12:36.10:0,36,465	0/0:28,0:26:75.15:0,75,974	0/0:27,0:27:72.18:0,72,946	0/0:17,0:16:39.10:0,39,494	0/0:28,0:26:39.11:0,39,514	0/0:24,0:21:33.07:0,33,428	0/0:31,0:30:79.05:0,79,999	0/0:15,0:14:39.13:0,39,509	0/0:20,0:21:36.92:0,37,604	0/0:13,0:13:33.11:0,33,451	0/0:21,0:12:36.05:0,36,469	0/0:31,0:31:79.04:0,79,1044	0/0:23,0:23:57.19:0,57,779	0/0:26,0:24:43.30:0,43,578	0/0:19,0:15:30.10:0,30,411	0/0:19,0:19:42.61:0,43,563	0/0:24,0:23:39.13:0,39,522	1/1:7,19:26:4.56:985,5,0	1/1:4,20:25:45.15:720,45,0	1/1:4,13:16:21.06:317,21,0
chr10	23510791	.	TGTGTGTGTGTGTGTGTGTGC	T	2898.02	PASS	AB=0.596;AC=5;AF=0.089;AN=56;BaseQRankSum=7.579;DP=640;FS=6.144;HRun=0;HaplotypeScore=242.4269;InbreedingCoeff=0.6062;MQ=55.78;MQ0=21;MQRankSum=-2.668;QD=42.62;ReadPosRankSum=2.189;VQSLOD=2.1229;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:23:24:0,24,780	0/0:11,0:11:5.41:0,5,496	0/0:20,0:8:19.86:0,20,579	0/0:23,0:9:17.25:0,17,869	0/0:34,0:34:39.96:0,40,2022	0/0:24,0:24:54.19:0,54,3822	0/0:31,0:30:24.08:0,24,1554	0/0:21,0:21:60.20:0,60,2873	0/0:19,0:19:27.56:0,28,1849	0/0:27,0:27:74.84:0,75,4675	0/0:14,0:13:21.05:0,21,1278	0/0:22,0:21:30.10:0,30,2042	0/0:9,0:9:18.53:0,19,1042	0/0:35,0:35:43.87:0,44,2376	0/0:15,0:15:5.85:0,6,344	0/0:14,0:14:21.04:0,21,1042	0/0:28,0:28:36.11:0,36,2389	0/0:30,0:28:81.28:0,81,5934	0/0:18,0:14:42.14:0,42,1828	0/0:26,0:26:36.12:0,36,2606	0/0:39,0:38:63.20:0,63,3727	0/0:19,0:19:43.69:0,44,2568	0/0:14,0:14:20.01:0,20,1385	0/0:29,0:28:42.12:0,42,2573	0/0:24,0:23:21.54:0,22,1493	0/1:10,21:31:99:1412,0,628	1/1:7,23:30:27.09:1433,27,0	1/1:4,3:5:3.01:171,3,0
chr10	23510807	.	T	TGC	1829.04	PASS	AB=0.820;AC=26;AF=0.464;AN=56;BaseQRankSum=-0.721;DP=554;FS=6.367;HRun=0;HaplotypeScore=109.4916;InbreedingCoeff=-0.0086;MQ=61.30;MQ0=10;MQRankSum=3.780;QD=4.46;ReadPosRankSum=2.128;VQSLOD=2.0938;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:19,0:17:5.18:85,0,5	0/1:1,10:11:2.33:89,0,2	0/0:4,0:2:1.82:0,2,5	0/0:9,0:4:5.99:0,6,63	0/1:32,0:32:30.45:30,0,50	0/1:16,4:20:27.20:216,0,27	0/1:34,0:33:8.82:16,0,9	0/1:19,0:19:53.70:138,0,54	0/1:7,11:18:6.86:211,0,7	0/1:10,14:26:1.39:237,0,1	1/1:4,9:12:6.24:98,6,0	0/1:8,10:17:1.41:81,0,1	1/1:2,5:7:3.01:49,3,0	0/1:29,0:29:5.55:13,0,6	1/1:14,0:14:2.77:21,3,0	1/1:13,0:13:8.68:52,9,0	0/0:24,0:24:3.24:0,3,78	0/0:31,0:29:44.17:0,44,465	0/0:13,0:10:19.95:0,20,135	0/1:25,0:25:22.59:23,0,58	0/0:35,0:34:13.58:0,14,128	1/1:18,2:20:13.09:250,13,0	0/1:6,9:15:8.13:87,0,8	1/1:9,18:26:10.30:149,10,0	0/1:9,16:24:11.74:132,0,12	0/1:25,0:25:12.88:13,0,234	0/0:24,0:24:25.30:0,25,127	0/0:4,0:3:2.84:0,3,14
chr10	23510809	.	T	TGC	3434.75	PASS	AB=0.713;AC=41;AF=0.732;AN=56;BaseQRankSum=-7.604;DP=556;FS=7.040;HRun=0;HaplotypeScore=107.9717;InbreedingCoeff=0.4537;MQ=62.27;MQ0=9;MQRankSum=1.751;QD=7.60;ReadPosRankSum=-2.007;VQSLOD=2.1869;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:19:14.69:104,15,0	1/1:10,0:10:8.54:116,9,0	0/0:3,0:2:2.90:0,3,16	0/0:9,0:4:5.63:0,6,31	1/1:12,21:33:4.86:45,5,0	1/1:14,0:21:5.23:208,5,0	0/0:10,24:33:2.53:0,3,13	1/1:17,0:17:26.42:194,26,0	1/1:17,0:17:15.05:243,15,0	1/1:26,0:26:42.33:346,42,0	1/1:12,0:11:6.49:98,6,0	1/1:18,0:17:9.02:122,9,0	1/1:6,0:6:6.01:74,6,0	0/0:12,17:29:2.84:0,3,9	1/1:3,1:18:2.67:26,3,0	1/1:4,0:13:8.75:65,9,0	0/1:3,20:23:6.50:133,0,6	1/1:28,4:30:5.15:462,5,0	1/1:15,0:13:14.78:122,15,0	1/1:9,15:25:9.03:140,9,0	0/1:12,23:34:1.17:135,0,1	1/1:19,0:20:20.59:271,21,0	1/1:15,0:15:8.95:122,9,0	1/1:27,0:26:18.50:233,19,0	1/1:23,0:22:12.48:167,12,0	0/1:25,0:25:7.30:7,0,255	0/0:24,0:24:22.86:0,23,118	0/0:4,0:3:2.84:0,3,14
chr10	23511101	.	GT	G	1225.16	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.777;DP=626;FS=1.921;HRun=7;HaplotypeScore=59.7655;InbreedingCoeff=0.9888;MQ=80.07;MQ0=0;MQRankSum=-4.069;QD=21.88;ReadPosRankSum=3.775;VQSLOD=3.3444;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:54.14:0,54,647	0/0:5,0:5:15.05:0,15,189	0/0:19,0:20:49.32:0,49,525	0/0:12,0:12:27.05:0,27,323	0/0:41,0:41:99:0,102,1237	0/0:31,0:31:87.27:0,87,1081	0/0:23,0:23:69.22:0,69,868	0/0:27,0:27:75.23:0,75,932	0/0:26,1:27:35.60:0,36,762	0/0:34,0:34:99:0,99,1233	0/0:13,0:13:33.10:0,33,403	0/0:23,0:23:63.18:0,63,768	0/0:19,0:19:57.17:0,57,704	0/0:22,0:22:66.17:0,66,791	1/1:1,29:30:72.16:735,72,0	1/1:1,25:26:60.14:612,60,0	0/0:27,0:27:78.25:0,78,981	0/0:15,0:15:42.12:0,42,514	0/0:13,0:13:30.06:0,30,350	0/0:22,0:22:60.18:0,60,742	0/0:19,0:19:51.16:0,51,641	0/0:26,0:26:78.25:0,78,980	0/0:22,0:22:60.18:0,60,742	0/0:24,0:24:66.19:0,66,816	0/0:16,0:15:42.13:0,42,528	0/0:25,0:25:63.20:0,63,793	0/0:39,0:39:99:0,108,1332	0/0:7,0:7:21.07:0,21,264
chr10	23511336	.	GT	G	1842.63	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=11.741;DP=706;FS=7.668;HRun=8;HaplotypeScore=73.7707;InbreedingCoeff=0.9997;MQ=86.45;MQ0=0;MQRankSum=-2.389;QD=22.47;ReadPosRankSum=2.439;VQSLOD=4.2485;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:84.25:0,84,1003	0/0:11,0:11:33.09:0,33,387	0/0:27,0:27:35.51:0,36,511	0/0:24,0:24:59.26:0,59,663	0/0:38,0:38:99:0,108,1267	0/0:22,0:22:60.18:0,60,725	0/0:21,0:21:57.13:0,57,672	0/0:29,0:29:75.20:0,75,876	0/0:22,0:22:63.18:0,63,742	0/0:45,0:45:99:0,114,1328	0/0:14,0:14:36.10:0,36,424	0/0:19,0:19:57.17:0,57,688	0/0:31,0:31:90.25:0,90,1066	0/0:27,0:27:78.24:0,78,942	0/0:29,0:29:84.26:0,84,1015	0/0:31,0:31:90.28:0,90,1087	0/0:15,0:15:36.09:0,36,422	0/0:13,0:13:36.11:0,36,434	0/0:20,0:20:54.16:0,54,649	0/0:36,0:36:99:0,99,1195	0/0:22,0:23:69.05:0,69,786	0/0:20,0:20:51.15:0,51,606	0/0:25,0:26:78.10:0,78,909	0/0:22,0:22:57.16:0,57,677	0/0:30,0:30:78.23:0,78,929	1/1:3,28:31:50.88:769,51,0	1/1:3,30:33:75.05:724,75,0	1/1:0,18:18:51.08:492,51,0
chr10	23515301	.	GC	G	12260.52	PASS	AC=34;AF=0.654;AN=52;BaseQRankSum=12.849;DP=641;FS=2.376;HRun=1;HaplotypeScore=57.8990;InbreedingCoeff=0.9964;MQ=52.74;MQ0=27;MQRankSum=3.533;QD=31.93;ReadPosRankSum=0.961;VQSLOD=4.5347;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:37:96.33:0,96,1531	1/1:0,15:15:39.13:538,39,0	./.	./.	1/1:0,32:32:63.21:881,63,0	1/1:3,25:24:57.19:797,57,0	1/1:2,15:12:21.07:294,21,0	1/1:1,22:18:54.18:754,54,0	1/1:2,23:24:15.57:628,16,0	1/1:0,29:29:87.29:1215,87,0	1/1:0,21:21:60.20:831,60,0	1/1:2,17:18:30.10:419,30,0	1/1:3,20:20:48.16:668,48,0	1/1:0,21:21:57.19:790,57,0	1/1:1,23:23:57.19:797,57,0	1/1:0,23:22:51.17:713,51,0	0/0:23,0:23:53.85:0,54,826	0/0:12,0:11:30.10:0,30,461	0/0:18,0:11:30.10:0,30,472	0/0:37,0:37:99:0,105,1639	0/0:17,0:16:45.15:0,45,717	1/1:0,20:20:54.18:755,54,0	1/1:0,26:26:60.20:839,60,0	1/1:1,11:10:30.10:419,30,0	1/1:0,26:26:66.22:923,66,0	0/0:31,1:30:48.33:0,48,1345	0/0:41,0:39:99:0,105,1649	0/0:10,0:9:24.08:0,24,384
chr10	23516664	.	C	CA	10804.95	PASS	AB=0.966;AC=41;AF=0.788;AN=52;BaseQRankSum=-1.654;DP=566;FS=2.251;HRun=3;HaplotypeScore=48.5787;InbreedingCoeff=0.7344;MQ=27.32;MQ0=108;MQRankSum=-4.987;QD=26.61;ReadPosRankSum=0.281;VQSLOD=3.7885;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:17:3.01:0,3,36	1/1:3,10:13:30.10:419,30,0	./.	./.	1/1:5,28:30:60.02:768,60,0	1/1:5,18:20:51.17:708,51,0	1/1:5,11:9:27.05:355,27,0	1/1:7,12:18:51.09:669,51,0	1/1:2,10:12:30.10:415,30,0	1/1:2,17:16:45.15:629,45,0	1/1:4,11:11:27.09:376,27,0	1/1:5,16:17:42.07:560,42,0	1/1:1,8:7:18.06:251,18,0	1/1:6,16:18:45.15:628,45,0	1/1:0,12:10:27.09:377,27,0	1/1:0,19:18:54.11:730,54,0	0/0:23,0:11:3.01:0,3,36	0/1:27,1:17:29.88:36,0,30	0/0:21,0:12:33.10:0,33,396	0/0:25,0:24:60.10:0,60,697	0/0:36,0:11:6.02:0,6,72	1/1:2,25:25:69.14:937,69,0	1/1:3,12:13:33.07:438,33,0	1/1:8,4:3:3.01:42,3,0	1/1:2,14:14:39.09:522,39,0	1/1:6,12:18:45.11:604,45,0	1/1:5,25:25:63.21:880,63,0	1/1:16,11:12:33.11:461,33,0
chr10	23516899	.	TA	T	2120.65	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.398;DP=605;FS=0.000;HRun=1;HaplotypeScore=79.6101;InbreedingCoeff=0.9371;MQ=56.76;MQ0=2;MQRankSum=-2.427;QD=33.66;ReadPosRankSum=3.381;VQSLOD=3.5012;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:69.21:0,69,1069	0/0:11,0:11:30.10:0,30,479	0/0:16,0:14:42.14:0,42,653	0/0:15,0:15:39.10:0,39,577	0/0:35,0:35:93.32:0,93,1473	0/0:27,0:27:78.25:0,78,1221	0/0:14,0:13:39.13:0,39,623	0/0:26,0:21:63.21:0,63,959	0/0:21,0:21:54.18:0,54,863	0/0:20,0:20:57.19:0,57,911	0/0:19,0:19:57.18:0,57,866	0/0:19,0:19:36.12:0,36,556	0/0:22,0:22:66.23:0,66,1054	0/0:29,0:29:75.26:0,75,1188	0/0:26,0:26:72.23:0,72,1128	0/0:15,0:15:42.14:0,42,669	0/0:31,0:31:75.26:0,75,1199	0/0:15,0:15:36.12:0,36,574	0/0:15,0:14:42.14:0,42,652	0/0:28,0:28:84.27:0,84,1310	0/0:20,0:20:60.19:0,60,935	0/0:28,0:28:78.25:0,78,1221	0/0:34,0:34:99:0,99,1572	0/0:11,0:11:33.11:0,33,513	0/0:21,0:21:63.21:0,63,1007	1/1:1,19:20:31.36:707,31,0	1/1:0,26:26:69.23:964,69,0	1/1:2,15:17:3.31:582,3,0
chr10	23519587	.	TA	T	3528.66	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-2.277;DP=266;FS=15.020;HRun=6;HaplotypeScore=35.6003;InbreedingCoeff=0.8509;MQ=66.62;MQ0=0;MQRankSum=0.526;QD=26.14;ReadPosRankSum=0.561;VQSLOD=1.8779;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:33.11:0,33,434	1/1:1,6:7:18.04:193,18,0	0/0:6,0:5:6.91:0,7,81	0/0:11,0:4:8.97:0,9,84	1/1:0,13:13:39.10:419,39,0	1/1:0,14:14:39.10:419,39,0	1/1:1,7:8:18.05:193,18,0	1/1:1,24:25:72.17:764,72,0	1/1:0,5:5:6.02:64,6,0	1/1:1,8:9:24.06:258,24,0	1/1:2,12:14:33.08:354,33,0	1/1:0,2:2:6.02:64,6,0	1/1:1,4:5:12.03:129,12,0	1/1:3,0:3:9.01:90,9,0	1/1:1,5:6:15.04:161,15,0	1/1:2,4:6:9.02:97,9,0	0/0:18,0:18:51.12:0,51,624	0/0:6,0:6:18.06:0,18,236	0/0:8,0:8:21.07:0,21,276	0/0:10,0:10:30.07:0,30,365	0/0:5,0:5:5.97:0,6,58	1/1:1,2:3:6.01:64,6,0	1/1:0,2:2:6.02:64,6,0	1/1:4,0:4:3.01:32,3,0	1/1:1,8:9:15.04:161,15,0	0/0:18,0:18:48.16:0,48,630	0/0:20,0:20:60.19:0,60,780	0/0:17,0:17:51.17:0,51,669
chr10	23519716	.	T	TA	2491.88	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-1.478;DP=372;FS=2.601;HRun=2;HaplotypeScore=34.6458;InbreedingCoeff=0.9837;MQ=80.54;MQ0=0;MQRankSum=-1.085;QD=38.94;ReadPosRankSum=1.320;VQSLOD=3.6882;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:8:20.96:0,21,227	0/0:7,0:7:21.05:0,21,248	0/0:14,0:14:33.08:0,33,381	0/0:6,0:6:18.05:0,18,214	0/0:18,0:18:51.15:0,51,620	0/0:19,0:19:57.18:0,57,706	0/0:8,0:8:21.05:0,21,247	0/0:20,0:20:57.17:0,57,695	0/0:9,0:9:27.08:0,27,335	0/0:10,0:10:27.08:0,27,324	0/0:12,0:12:27.08:0,27,325	0/0:7,0:7:18.06:0,18,223	0/0:9,0:9:27.08:0,27,334	0/0:9,0:9:24.06:0,24,285	0/0:9,0:9:27.07:0,27,322	0/0:9,0:9:27.08:0,27,324	0/0:14,0:14:42.11:0,42,504	0/0:10,0:10:27.03:0,27,305	0/0:28,0:28:75.23:0,75,927	0/0:17,0:17:48.15:0,48,595	0/0:13,0:13:39.12:0,39,483	0/0:16,0:16:42.13:0,42,521	0/0:8,0:8:18.06:0,18,223	0/0:12,0:12:36.11:0,36,446	0/0:16,0:16:45.12:0,45,542	1/1:0,16:16:45.15:648,45,0	1/1:0,16:16:45.15:648,45,0	1/1:0,32:32:93.31:1339,93,0
chr10	23520478	.	A	ATGTG	4088.61	PASS	AB=1.000;AC=28;AF=0.500;AN=56;BaseQRankSum=-2.893;DP=577;FS=10.893;HRun=0;HaplotypeScore=138.1139;InbreedingCoeff=0.5349;MQ=59.93;MQ0=31;MQRankSum=-1.139;QD=11.85;ReadPosRankSum=-0.957;VQSLOD=2.6065;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:25:11.83:135,12,0	0/0:6,0:6:1.41:0,1,2	0/0:39,0:25:14.90:0,15,154	0/0:32,0:17:15.92:0,16,204	0/0:24,0:21:5.30:0,5,13	0/0:14,0:14:3.13:0,3,6	0/0:22,0:16:5.15:0,5,26	1/1:26,0:22:11.99:138,12,0	1/1:14,0:13:1.69:32,2,0	1/1:24,0:19:1.10:12,1,0	0/0:12,0:9:4.01:0,4,11	0/0:17,0:14:2.57:0,3,6	0/0:22,0:20:6.04:0,6,13	0/0:17,0:16:6.86:0,7,22	0/0:15,0:13:12.85:0,13,36	0/1:15,0:14:9.28:9,0,19	1/1:7,8:18:29.57:595,30,0	1/1:7,5:12:9.01:170,9,0	1/1:17,8:27:47.82:881,48,0	1/1:7,9:19:24.05:433,24,0	1/1:14,6:21:6.02:145,6,0	0/1:20,0:15:1.88:29,0,2	0/1:19,0:17:1.02:9,0,1	0/1:16,0:12:5.58:9,0,6	0/0:11,0:10:4.21:0,4,9	1/1:38,0:35:56.21:753,56,0	1/1:33,0:30:44.64:642,45,0	1/1:9,0:8:9.01:97,9,0
chr10	23520503	.	TG	T	4331.69	PASS	AB=0.828;AC=41;AF=0.732;AN=56;BaseQRankSum=3.173;DP=659;FS=5.084;HRun=2;HaplotypeScore=93.7316;InbreedingCoeff=0.3293;MQ=42.88;MQ0=81;MQRankSum=0.931;QD=9.04;ReadPosRankSum=4.127;VQSLOD=2.7703;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:27,8:32:94.55:143,0,95	1/1:5,0:5:5.59:16,6,0	0/0:64,1:12:28.99:0,29,285	0/0:70,0:10:26.91:0,27,313	1/1:21,3:20:15.96:131,16,0	1/1:20,1:18:14.97:125,15,0	1/1:12,9:13:19.48:190,19,0	1/1:5,15:15:21.28:400,21,0	1/1:13,0:11:9.12:71,9,0	1/1:8,14:13:36.20:409,36,0	1/1:8,11:10:12.88:115,13,0	1/1:15,5:13:13.38:134,13,0	1/1:18,3:19:21.37:164,21,0	1/1:18,4:18:20.70:187,21,0	1/1:3,17:15:30.55:365,31,0	1/1:2,15:12:30.07:356,30,0	0/0:21,1:22:46.16:0,46,452	0/1:7,2:8:17.04:17,0,43	0/1:22,1:24:22.61:23,0,507	0/1:23,1:23:48.19:48,0,322	0/0:22,0:20:20.95:0,21,238	1/1:13,7:15:14.62:131,15,0	1/1:22,2:20:29.90:290,30,0	1/1:16,6:14:21.03:216,21,0	1/1:11,2:11:13.86:160,14,0	0/1:23,7:27:99:315,0,370	0/1:24,4:25:99:240,0,146	0/1:1,4:4:16.99:87,0,17
chr10	23520504	.	G	GT	5837.60	PASS	AB=0.941;AC=43;AF=0.768;AN=56;BaseQRankSum=4.477;DP=648;FS=13.691;HRun=1;HaplotypeScore=88.8551;InbreedingCoeff=0.1985;MQ=43.03;MQ0=81;MQRankSum=2.317;QD=11.75;ReadPosRankSum=6.143;VQSLOD=1.6803;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:32,1:30:95.14:167,0,95	1/1:1,5:6:9.03:144,9,0	0/0:62,0:11:29.91:0,30,315	0/0:70,0:10:27.06:0,27,313	1/1:3,19:19:17.82:196,18,0	1/1:1,21:19:18.03:251,18,0	1/1:12,8:12:23.61:270,24,0	1/1:18,1:14:9.91:418,10,0	1/1:0,13:11:12.04:172,12,0	1/1:14,8:13:39:466,39,0	1/1:12,6:10:14.96:192,15,0	1/1:6,14:13:14.90:170,15,0	1/1:4,17:19:26.94:367,27,0	1/1:5,17:18:23.98:311,24,0	1/1:18,2:15:30.02:210,30,0	1/1:15,1:11:29.27:227,29,0	0/1:22,0:21:16.58:17,0,244	1/1:7,0:6:1.28:33,1,0	0/1:22,0:22:99:113,0,388	0/1:24,0:23:99:112,0,241	0/0:19,0:17:2.05:0,2,183	1/1:8,13:16:17.91:216,18,0	1/1:3,22:21:32.97:437,33,0	1/1:8,14:14:20.61:248,21,0	1/1:4,11:13:14.91:159,15,0	0/1:25,5:27:99:448,0,362	0/1:19,9:25:99:400,0,145	0/1:5,0:4:16.96:91,0,17
chr10	23520506	.	TGC	T	2251.89	PASS	AB=1.000;AC=41;AF=0.732;AN=56;BaseQRankSum=2.695;DP=647;FS=6.826;HRun=0;HaplotypeScore=106.5455;InbreedingCoeff=0.1823;MQ=42.89;MQ0=82;MQRankSum=-1.087;QD=3.83;ReadPosRankSum=1.017;VQSLOD=2.1164;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:34,0:31:35.52:36,0,151	0/0:6,0:6:1.41:0,1,3	0/1:60,0:9:25.87:26,0,103	0/1:69,0:10:26.17:26,0,110	1/1:22,1:19:7.22:62,7,0	1/1:20,0:17:1.88:25,2,0	1/1:20,1:13:6.95:81,7,0	1/1:19,0:14:34.71:211,35,0	0/0:13,0:11:0.68:0,1,2	1/1:22,0:13:33.39:189,33,0	1/1:19,0:10:2.19:55,2,0	1/1:20,0:13:7.76:45,8,0	1/1:20,0:18:4.22:55,4,0	1/1:21,0:17:2.28:40,2,0	1/1:21,1:16:29.31:195,29,0	1/1:14,2:11:29.33:208,29,0	0/0:21,0:20:47.98:0,48,791	0/1:7,0:6:18.93:19,0,69	0/1:21,0:21:27.92:28,0,563	0/1:25,0:24:2.97:3,0,617	0/0:19,0:17:23.26:0,23,340	1/1:23,0:18:13.40:99,13,0	1/1:26,0:22:17.07:92,17,0	1/1:23,0:15:11.88:58,12,0	0/1:14,0:12:6.50:54,0,7	1/1:31,0:28:54.67:426,55,0	1/1:27,0:24:48.04:275,48,0	1/1:5,0:4:11.99:103,12,0
chr10	23520508	.	CGT	C	794.01	PASS	AB=0.975;AC=8;AF=0.143;AN=56;BaseQRankSum=-0.238;DP=642;FS=6.472;HRun=0;HaplotypeScore=110.0013;InbreedingCoeff=0.5699;MQ=42.37;MQ0=82;MQRankSum=-4.400;QD=8.27;ReadPosRankSum=2.303;VQSLOD=3.0852;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:32:10.90:0,11,187	0/0:8,0:8:9.88:0,10,79	0/0:55,0:7:8.99:0,9,102	0/0:69,0:9:10.18:0,10,111	0/0:22,0:18:6.96:0,7,86	0/0:20,0:17:16.96:0,17,117	0/0:22,0:14:17.44:0,17,135	0/0:17,0:12:8.65:0,9,31	0/0:13,0:11:11.85:0,12,87	0/0:23,0:14:23.32:0,23,118	0/0:19,0:10:1.95:0,2,64	0/0:21,0:13:13.58:0,14,80	0/0:21,0:18:15.20:0,15,156	0/0:21,0:17:22.07:0,22,143	0/0:22,0:16:12.18:0,12,91	0/1:16,0:11:1.12:1,0,32	0/0:23,0:22:44.73:0,45,670	0/0:7,0:6:5.61:0,6,59	0/1:18,1:19:28.75:29,0,457	0/0:23,0:22:41.34:0,41,615	0/0:19,0:17:19.62:0,20,294	0/0:23,0:18:14.43:0,14,97	0/0:25,0:21:33.21:0,33,204	0/0:23,0:15:19.41:0,19,117	0/0:14,0:12:17.39:0,17,128	1/1:16,13:26:30.55:439,31,0	1/1:16,11:24:23.40:386,23,0	1/1:4,1:4:8.99:81,9,0
chr10	23521297	.	G	GA	2550.03	PASS	AB=0.542;AC=9;AF=0.161;AN=56;BaseQRankSum=-11.317;DP=603;FS=1.967;HRun=8;HaplotypeScore=98.2787;InbreedingCoeff=0.9234;MQ=83.69;MQ0=1;MQRankSum=-1.313;QD=26.29;ReadPosRankSum=0.456;VQSLOD=3.6480;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:33.02:0,33,302	0/0:8,0:8:21:0,21,188	0/0:31,0:27:20.07:0,20,326	0/0:22,0:20:12.82:0,13,165	0/0:41,0:41:99:0,114,1043	0/0:24,0:24:72.04:0,72,659	0/0:7,0:7:18.01:0,18,165	0/0:25,0:24:63.01:0,63,569	0/0:13,0:13:30.01:0,30,275	0/0:36,0:36:99:0,99,898	0/0:22,0:22:63.03:0,63,576	0/0:18,0:18:54.03:0,54,494	0/0:23,0:23:66.04:0,66,604	0/0:22,0:22:51.01:0,51,467	0/0:18,0:18:48.02:0,48,439	0/0:20,0:20:57.02:0,57,517	1/1:2,14:16:41.49:458,41,0	1/1:1,16:17:42.12:478,42,0	1/1:3,22:25:63.17:716,63,0	1/1:1,25:26:72.17:813,72,0	0/1:2,11:13:0.39:250,0,0	0/0:29,0:29:81.04:0,81,741	0/0:28,0:28:78.03:0,78,710	0/0:10,0:10:30:0,30,269	0/0:17,0:17:45.02:0,45,412	0/0:28,0:28:75.04:0,75,687	0/0:30,0:30:78.04:0,78,714	0/0:21,0:21:63.03:0,63,576
chr10	23522224	.	ACTGGAGTTTATC	A	5038.56	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=11.038;DP=595;FS=1.928;HRun=0;HaplotypeScore=203.4848;InbreedingCoeff=0.9756;MQ=85.60;MQ0=0;MQRankSum=-9.963;QD=79.98;ReadPosRankSum=2.284;VQSLOD=4.3787;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:75.26:0,75,4141	0/0:6,0:6:18.06:0,18,1122	0/0:17,0:17:44.94:0,45,2099	0/0:26,0:26:75.04:0,75,3416	0/0:36,0:36:99:0,108,6242	0/0:23,0:23:69.24:0,69,4253	0/0:28,0:28:84.29:0,84,5008	0/0:30,0:30:87.30:0,87,4921	0/0:22,0:22:66.23:0,66,4004	0/0:17,0:17:51.17:0,51,2783	0/0:26,0:26:75.26:0,75,4502	0/0:22,0:22:66.21:0,66,3929	0/0:32,0:32:96.32:0,96,5537	0/0:20,0:20:60.19:0,60,3357	0/0:29,0:29:87.27:0,87,4549	0/0:18,0:17:54.19:0,54,3381	0/0:16,0:16:45.15:0,45,2817	0/0:9,0:9:27.04:0,27,1295	0/0:21,0:21:60.21:0,60,3418	0/0:29,0:29:84.27:0,84,4942	0/0:12,0:12:36.12:0,36,2064	0/0:19,0:19:57.18:0,57,3035	0/0:15,0:15:45.14:0,45,2649	0/0:15,0:15:45.15:0,45,2760	0/0:19,0:19:57.20:0,57,3475	1/1:0,25:25:66.21:2388,66,0	1/1:2,26:28:60.21:2303,60,0	1/1:3,7:10:9.03:347,9,0
chr10	23524028	.	G	GAA	9461.04	PASS	AB=1.000;AC=35;AF=0.625;AN=56;BaseQRankSum=-12.085;DP=470;FS=9.891;HRun=8;HaplotypeScore=54.6581;InbreedingCoeff=0.9002;MQ=76.19;MQ0=4;MQRankSum=-3.560;QD=31.75;ReadPosRankSum=-0.863;VQSLOD=3.6792;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:48.03:0,48,562	1/1:2,3:5:9.03:143,9,0	0/0:10,0:10:12:0,12,133	0/0:14,0:14:29.92:0,30,303	1/1:1,19:23:63.16:934,63,0	1/1:4,23:27:60.20:951,60,0	1/1:2,13:17:42.14:645,42,0	1/1:8,15:23:42.11:620,42,0	1/1:3,9:12:24.08:380,24,0	1/1:2,16:19:51.15:768,51,0	1/1:4,17:21:51.09:754,51,0	1/1:0,8:8:21.07:325,21,0	1/1:1,7:8:18.06:285,18,0	1/1:2,13:15:33.11:523,33,0	1/1:2,12:14:27.09:428,27,0	1/1:1,19:19:45.15:714,45,0	0/0:18,0:18:48.07:0,48,535	0/0:25,0:25:54.10:0,54,602	0/0:13,0:13:33.08:0,33,368	0/0:29,0:29:75.18:0,75,827	0/0:10,0:10:27.07:0,27,301	1/1:2,15:17:42.14:666,42,0	1/1:4,18:23:42.14:667,42,0	1/1:3,6:9:9.03:143,9,0	1/1:4,12:16:32.60:485,33,0	0/1:18,0:18:29.72:30,0,381	0/0:17,0:16:51.14:0,51,569	0/0:16,0:16:42.11:0,42,468
chr10	23524136	.	TA	T	2551.64	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=2.964;DP=550;FS=2.934;HRun=2;HaplotypeScore=96.3611;InbreedingCoeff=0.9982;MQ=79.71;MQ0=0;MQRankSum=1.780;QD=33.14;ReadPosRankSum=1.702;VQSLOD=3.6594;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:72.23:0,72,1056	0/0:8,0:8:24.08:0,24,358	0/0:19,0:19:51.14:0,51,685	0/0:16,0:16:48.13:0,48,680	0/0:32,0:32:93.02:0,93,1267	0/0:28,0:28:84.20:0,84,1198	0/0:21,0:21:60.03:0,60,820	0/0:24,0:24:69.23:0,69,1016	0/0:15,0:15:36.05:0,36,507	0/0:18,0:18:54.18:0,54,818	0/0:20,0:20:57.19:0,57,852	0/0:19,0:19:51.06:0,51,690	0/0:18,0:17:42.07:0,42,597	0/0:15,0:15:42.14:0,42,627	0/0:12,0:12:24.08:0,24,356	0/0:22,0:21:45.15:0,45,650	0/0:17,0:17:51.17:0,51,763	0/0:11,0:11:30.07:0,30,425	0/0:18,0:18:54.15:0,54,738	0/0:18,0:18:54.16:0,54,770	0/0:15,0:15:42.12:0,42,604	0/0:15,0:15:45.07:0,45,641	0/0:23,0:23:66.09:0,66,929	0/0:22,0:22:47.99:0,48,639	0/0:19,0:19:53.92:0,54,701	1/1:1,30:31:48.34:1122,48,0	1/1:0,35:35:90.18:1144,90,0	1/1:0,11:11:33.11:428,33,0
chr10	23524186	.	A	ACCTCCATC	34974.93	PASS	AB=0.966;AC=35;AF=0.625;AN=56;BaseQRankSum=-12.229;DP=635;FS=1.042;HRun=0;HaplotypeScore=147.3791;InbreedingCoeff=0.9194;MQ=73.95;MQ0=0;MQRankSum=-16.943;QD=84.89;ReadPosRankSum=0.420;VQSLOD=4.9647;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:93.32:0,93,2543	1/1:1,4:6:15.05:628,15,0	0/0:22,0:22:60.21:0,60,1573	0/0:16,0:16:36.12:0,36,879	1/1:10,21:35:57.15:2228,57,0	1/1:10,20:32:81.28:3416,81,0	1/1:6,18:27:57.20:2436,57,0	1/1:18,10:34:99:3783,102,0	1/1:8,10:19:45.15:1869,45,0	1/1:8,17:26:63.20:2616,63,0	1/1:4,7:13:21.07:934,21,0	1/1:5,12:19:45.15:1894,45,0	1/1:6,21:29:69.24:3014,69,0	1/1:5,9:16:36.08:1465,36,0	1/1:4,9:17:27.09:1128,27,0	1/1:3,25:33:69.24:3015,69,0	0/0:24,0:24:60.19:0,60,1586	0/0:11,0:11:29.71:0,30,774	0/0:18,0:18:54.17:0,54,1431	0/0:26,0:26:72.25:0,72,2024	0/0:25,0:25:72.23:0,72,1944	1/1:3,6:11:18.06:768,18,0	1/1:3,13:17:27.56:1201,28,0	1/1:6,14:21:39.13:1660,39,0	1/1:6,19:26:66.23:2859,66,0	0/1:27,1:28:61.61:62,0,1908	0/0:35,0:35:93.32:0,93,2635	0/0:14,0:14:42.14:0,42,1206
chr10	23524519	.	A	AGT	1732.57	PASS	AB=0.854;AC=36;AF=0.720;AN=50;BaseQRankSum=-0.655;DP=599;FS=5.064;HRun=0;HaplotypeScore=112.1966;InbreedingCoeff=0.0215;MQ=68.36;MQ0=4;MQRankSum=-0.804;QD=3.74;ReadPosRankSum=-1.965;VQSLOD=1.4858;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:34:5.58:0,6,26	1/1:10,0:13:6:52,6,0	./.	./.	0/1:21,6:27:23.53:79,0,24	0/1:16,6:26:26.20:38,0,26	0/1:20,0:20:20.27:58,0,20	1/1:22,0:22:8.94:65,9,0	0/1:16,1:18:23.23:58,0,23	1/1:16,4:20:12.02:150,12,0	1/1:11,2:13:3.01:44,3,0	0/1:9,0:9:52.47:53,0,52	1/1:23,0:23:3.45:23,3,0	1/1:17,7:26:6.02:85,6,0	1/1:16,3:22:6.02:88,6,0	1/1:24,0:24:12.03:157,12,0	1/1:32,0:31:36.05:316,36,0	1/1:12,0:12:11.76:96,12,0	1/1:22,0:21:1.36:4,1,0	1/1:19,0:19:11.39:112,11,0	1/1:21,0:21:14.99:149,15,0	1/1:17,0:17:3:25,3,0	0/1:16,2:18:29.22:29,0,114	0/1:24,10:34:20.26:121,0,20	0/1:14,5:22:23.24:79,0,23	0/0:22,0:22:9.02:0,9,97	0/0:19,0:21:8.69:0,9,60	./.
chr10	23525343	.	AGTGTGTGTGT	A	1772.59	PASS	AB=0.872;AC=29;AF=0.580;AN=50;BaseQRankSum=1.327;DP=500;FS=6.436;HRun=0;HaplotypeScore=141.5719;InbreedingCoeff=0.0204;MQ=50.09;MQ0=18;MQRankSum=-2.077;QD=5.74;ReadPosRankSum=2.012;VQSLOD=2.0087;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:45.13:0,45,1303	1/1:8,1:8:2.87:88,3,0	./.	./.	0/0:11,2:12:0:0,0,0	0/1:11,5:15:23.71:164,0,24	0/1:18,0:17:0.49:0,0,88	0/0:34,0:33:3.41:0,3,22	1/1:6,3:9:9.03:264,9,0	0/1:17,0:17:42.22:79,0,42	0/1:8,2:11:2.57:16,0,3	1/1:11,0:11:6.02:113,6,0	1/1:12,0:14:5.95:101,6,0	0/0:14,0:14:2.98:0,3,21	1/1:13,1:14:3.01:88,3,0	1/1:18,2:20:3.01:88,3,0	0/1:23,0:24:30.57:31,0,75	0/0:14,0:13:5.38:0,5,49	0/1:16,0:18:38.12:38,0,65	0/1:10,1:11:65.89:73,0,66	0/0:21,0:17:8.61:0,9,98	1/1:15,0:15:3.01:54,3,0	./.	1/1:18,5:23:3.01:88,3,0	0/1:17,3:19:13.22:291,0,13	0/1:11,0:20:31.92:61,0,32	1/1:17,0:19:6.02:140,6,0	1/1:10,0:15:6.02:140,6,0
chr10	23527152	.	GCA	G	2492.34	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=11.072;DP=455;FS=7.956;HRun=0;HaplotypeScore=62.1299;InbreedingCoeff=0.9856;MQ=78.94;MQ0=0;MQRankSum=-3.359;QD=34.62;ReadPosRankSum=2.405;VQSLOD=5.9075;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:42.14:0,42,786	0/0:6,0:6:18.06:0,18,336	0/0:11,0:11:33.11:0,33,618	0/0:9,0:10:24:0,24,361	0/0:24,0:23:72.23:0,72,1305	0/0:19,0:19:54.19:0,54,1011	0/0:5,0:5:15.03:0,15,247	0/0:28,0:28:72.24:0,72,1319	0/0:12,0:12:30.10:0,30,562	0/0:27,0:27:75.24:0,75,1349	0/0:30,0:30:87.27:0,87,1559	0/0:13,0:13:36.12:0,36,674	0/0:20,0:20:54.18:0,54,1006	0/0:12,0:12:30.10:0,30,555	0/0:20,0:20:54.19:0,54,1011	0/0:15,0:15:42.13:0,42,754	1/1:1,19:20:54.11:769,54,0	1/1:2,14:16:42.14:618,42,0	1/1:0,8:8:24.08:353,24,0	1/1:1,19:20:48.16:706,48,0	1/1:0,8:8:15.05:221,15,0	0/0:5,0:5:15.05:0,15,281	0/0:11,0:11:33.09:0,33,585	0/0:10,0:10:30.03:0,30,461	0/0:14,0:14:39.09:0,39,637	0/0:29,0:29:87.27:0,87,1541	0/0:30,0:30:90.23:0,90,1547	0/0:17,0:17:48.10:0,48,830
chr10	23527232	.	AT	A	5629.99	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=6.909;DP=380;FS=11.627;HRun=8;HaplotypeScore=40.1745;InbreedingCoeff=0.9693;MQ=73.26;MQ0=0;MQRankSum=-0.131;QD=24.91;ReadPosRankSum=1.260;VQSLOD=4.6378;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:33.03:0,33,359	1/1:0,6:6:18.03:174,18,0	0/0:11,0:11:15.04:0,15,173	0/0:8,0:6:11.90:0,12,121	1/1:2,17:19:51.04:484,51,0	1/1:1,12:13:33.05:319,33,0	1/1:0,13:13:36.06:348,36,0	1/1:3,24:27:72.08:685,72,0	1/1:0,13:13:36.06:348,36,0	1/1:1,14:15:42.07:406,42,0	1/1:1,22:23:66.11:637,66,0	1/1:1,14:15:36.06:347,36,0	1/1:1,11:12:26.94:261,27,0	1/1:1,7:8:15.02:145,15,0	1/1:0,11:11:33.05:319,33,0	1/1:1,11:12:27.04:261,27,0	0/0:13,0:13:39.10:0,39,458	0/0:14,0:14:39.03:0,39,418	0/0:19,1:22:27.89:0,28,557	0/0:15,0:15:39.12:0,39,471	0/0:6,0:6:15.05:0,15,181	1/1:0,5:5:15.02:145,15,0	1/1:1,7:8:21.03:203,21,0	1/1:0,6:6:18.03:174,18,0	1/1:3,17:20:39.05:377,39,0	0/0:13,0:13:6.61:0,7,293	0/0:26,0:26:69.21:0,69,833	0/0:14,0:14:39.09:0,39,439
chr10	23529461	.	AC	A	4233.62	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=9.838;DP=632;FS=5.954;HRun=4;HaplotypeScore=72.7682;InbreedingCoeff=0.9997;MQ=84.55;MQ0=0;MQRankSum=-1.450;QD=32.57;ReadPosRankSum=0.092;VQSLOD=5.3221;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:87.28:0,87,1200	0/0:12,0:12:36.12:0,36,504	0/0:20,0:20:60.15:0,60,777	0/0:24,0:23:63.18:0,63,814	0/0:28,0:28:84.26:0,84,1142	0/0:30,0:30:90.28:0,90,1240	0/0:23,0:23:66.18:0,66,901	0/0:22,0:22:63.14:0,63,830	0/0:21,0:21:60.20:0,60,839	0/0:27,0:27:78.26:0,78,1092	0/0:27,0:27:78.26:0,78,1091	0/0:15,0:15:45.14:0,45,614	0/0:24,0:24:66.19:0,66,889	0/0:12,0:12:27.08:0,27,363	0/0:15,0:15:42.10:0,42,561	0/0:15,0:15:42.14:0,42,588	1/1:2,30:32:81.25:972,81,0	1/1:0,26:26:72.22:864,72,0	1/1:1,23:24:69.18:814,69,0	1/1:0,27:27:78.24:936,78,0	1/1:2,19:21:54.16:648,54,0	0/0:32,0:32:87.28:0,87,1201	0/0:31,0:31:90.29:0,90,1241	0/0:20,0:20:60.16:0,60,818	0/0:17,0:17:48.15:0,48,657	0/0:28,0:28:81.26:0,81,1116	0/0:18,0:18:54.18:0,54,756	0/0:12,0:12:36.12:0,36,504
chr10	23529844	.	ATTAG	A	3509.91	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=7.646;DP=510;FS=1.022;HRun=0;HaplotypeScore=91.0780;InbreedingCoeff=0.9955;MQ=76.71;MQ0=0;MQRankSum=-3.368;QD=43.33;ReadPosRankSum=2.708;VQSLOD=4.0845;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:36.12:0,36,944	0/0:12,0:12:30.10:0,30,792	0/0:16,0:16:39.10:0,39,936	0/0:11,0:11:30.07:0,30,670	0/0:31,0:31:84.27:0,84,2090	0/0:31,0:31:81.27:0,81,2077	0/0:15,0:15:45.15:0,45,1188	0/0:36,0:36:99:0,105,2552	0/0:7,0:7:18.06:0,18,440	0/0:29,0:29:81.28:0,81,2112	0/0:20,0:20:60.21:0,60,1583	0/0:8,0:8:24.08:0,24,632	0/0:14,0:15:42.14:0,42,1056	0/0:19,0:19:57.20:0,57,1500	0/0:15,0:15:42.14:0,42,1109	0/0:15,0:15:45.15:0,45,1176	1/1:4,19:23:48.16:883,48,0	1/1:0,20:20:48.16:883,48,0	1/1:0,9:9:27.08:468,27,0	1/1:1,18:19:51.11:896,51,0	1/1:0,10:10:21.07:379,21,0	0/0:19,0:19:54.17:0,54,1372	0/0:19,0:19:54.19:0,54,1424	0/0:10,0:10:24.08:0,24,634	0/0:23,0:23:69.24:0,69,1817	0/0:26,0:26:78.25:0,78,1982	0/0:26,0:26:75.26:0,75,1961	0/0:11,0:11:27.09:0,27,712
chr10	23530581	.	TTCTCTCTCTCTCTC	T	7909.29	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=3.195;DP=401;FS=2.468;HRun=0;HaplotypeScore=159.8655;InbreedingCoeff=0.8602;MQ=49.60;MQ0=15;MQRankSum=-5.403;QD=38.03;ReadPosRankSum=2.550;VQSLOD=4.3840;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:16:12.04:0,12,267	1/1:2,7:9:15.05:602,15,0	0/0:13,0:3:9:0,9,105	0/0:13,0:5:11.39:0,11,149	1/1:11,4:15:18.05:457,18,0	1/1:4,16:19:12.04:484,12,0	1/1:6,1:6:9.03:255,9,0	1/1:26,0:22:26.97:257,27,0	1/1:4,5:9:3.01:121,3,0	1/1:7,4:11:26.98:682,27,0	1/1:12,5:17:30.07:756,30,0	1/1:7,1:7:15.05:372,15,0	1/1:4,8:12:9.03:363,9,0	1/1:1,4:5:6.02:242,6,0	1/1:2,3:4:6.02:241,6,0	1/1:11,2:12:20.75:546,21,0	0/0:7,0:15:6.01:0,6,88	0/0:8,0:8:17.95:0,18,247	0/0:15,0:13:22.38:0,22,294	0/0:14,0:22:30.49:0,30,748	0/0:11,0:11:17.80:0,18,136	1/1:11,8:19:36.11:1154,36,0	1/1:10,3:13:23.83:410,24,0	0/0:1,0:1:3.01:0,3,79	1/1:5,14:18:24.08:967,24,0	0/0:24,0:24:57.17:0,57,2272	0/0:25,0:25:33.10:0,33,1105	0/0:25,0:24:63.01:0,63,1383
chr10	23530609	.	C	CT	240.02	PASS	AB=0.933;AC=8;AF=0.143;AN=56;BaseQRankSum=3.071;DP=371;FS=2.733;HRun=1;HaplotypeScore=126.9669;InbreedingCoeff=-0.0783;MQ=41.80;MQ0=14;MQRankSum=-1.745;QD=2.93;ReadPosRankSum=-0.953;VQSLOD=-0.4081;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:8:2.37:0,2,19	0/0:9,0:9:17.09:0,17,99	0/0:22,0:4:8.39:0,8,87	0/0:33,0:10:2.94:0,3,210	0/1:9,0:9:39.43:149,0,39	0/0:24,0:23:20.75:0,21,171	0/0:9,1:9:3.95:0,4,198	0/0:14,0:12:30.08:0,30,370	1/1:7,0:7:1.82:5,2,0	0/1:14,1:15:7.31:7,0,386	0/1:12,2:14:56.78:57,0,195	0/1:7,1:8:8.57:9,0,116	0/0:11,0:11:17.86:0,18,171	0/0:6,0:6:11.90:0,12,115	0/0:8,0:8:0.92:0,1,46	0/0:13,0:12:22.54:0,23,272	0/0:12,0:12:11.91:0,12,100	0/0:10,0:9:11.77:0,12,138	0/0:16,0:15:6.53:0,7,363	0/0:16,0:16:38.19:0,38,327	0/0:10,0:10:4.01:0,4,82	0/1:15,2:17:67:67,0,238	0/1:12,0:12:64.96:65,0,224	0/0:3,0:3:2.93:0,3,18	0/0:19,0:18:25.60:0,26,238	0/0:18,1:19:41.57:0,42,450	0/0:14,0:14:17.42:0,17,186	0/0:10,0:9:22.63:0,23,132
chr10	23530688	.	TCACACACA	T	781.60	PASS	AB=0.922;AC=9;AF=0.161;AN=56;BaseQRankSum=1.227;DP=463;FS=1.129;HRun=0;HaplotypeScore=203.9812;InbreedingCoeff=0.2831;MQ=35.14;MQ0=32;MQRankSum=-3.119;QD=9.42;ReadPosRankSum=1.128;VQSLOD=2.3966;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:14:2.89:0,3,23	0/0:5,0:5:6.02:0,6,150	0/0:4,0:1:3.01:0,3,42	0/0:7,0:2:2.50:0,2,9	0/0:25,0:25:16.20:0,16,279	0/0:27,0:27:18.46:0,18,313	0/0:16,0:14:8.58:0,9,222	0/0:24,0:16:30.07:0,30,760	0/0:15,0:15:12.37:0,12,231	0/0:26,0:25:53.78:0,54,1224	0/0:23,0:22:0.79:0,1,1	0/0:21,0:17:5.85:0,6,134	0/0:17,0:16:20.86:0,21,526	0/1:16,0:14:0.01:1,0,0	0/1:23,0:22:0.26:1,0,0	0/0:18,0:17:14.47:0,14,437	1/1:6,2:5:3.01:71,3,0	0/1:7,0:6:62.93:202,0,63	0/1:7,4:9:60.90:297,0,61	1/1:5,0:11:12.04:263,12,0	0/1:6,1:4:7.97:71,0,8	0/0:21,0:19:8.70:0,9,198	0/0:20,0:17:2.67:0,3,85	0/0:11,0:9:2.92:0,3,23	0/0:31,0:26:5.60:0,6,145	0/0:26,0:24:48.16:0,48,1231	0/0:19,0:17:26.98:0,27,660	0/0:8,0:7:15.01:0,15,355
chr10	23530717	.	TAC	T	1291.65	PASS	AB=0.830;AC=21;AF=0.375;AN=56;BaseQRankSum=0.027;DP=450;FS=2.239;HRun=0;HaplotypeScore=240.7383;InbreedingCoeff=0.3690;MQ=39.29;MQ0=11;MQRankSum=-3.303;QD=4.68;ReadPosRankSum=2.068;VQSLOD=3.0646;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:11,0:11:0:0,0,0	1/1:5,2:7:5.85:34,6,0	0/0:18,0:4:9.03:0,9,143	0/0:14,0:5:11.74:0,12,87	0/0:19,9:28:7.93:0,8,39	0/1:20,10:30:9.33:125,0,9	1/1:5,5:10:17.84:158,18,0	0/1:25,8:31:11.33:636,0,11	0/0:10,5:15:5.63:0,6,43	0/1:15,4:19:23.28:272,0,23	0/1:15,4:19:0.27:0,0,0	1/1:16,6:19:1.96:11,2,0	1/1:14,3:17:17.49:117,17,0	0/1:15,5:18:0:0,0,0	0/1:16,6:22:0.26:1,0,0	0/1:8,3:11:26.80:27,0,40	0/0:4,0:3:2.88:0,3,15	0/0:4,0:4:11.89:0,12,97	0/0:13,0:13:35.25:0,35,393	0/0:13,0:13:14.43:0,14,103	0/0:7,0:6:5.98:0,6,57	0/0:12,2:13:2.61:0,3,28	1/1:13,7:19:3:28,3,0	0/1:7,1:7:0.03:0,0,0	1/1:22,4:24:4.63:35,5,0	0/0:23,0:23:60.16:0,60,864	0/0:16,0:16:20.91:0,21,307	0/0:5,0:5:9.03:0,9,134
chr10	23531990	.	CA	C	14868.39	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=7.774;DP=640;FS=3.456;HRun=1;HaplotypeScore=209.8772;InbreedingCoeff=0.9799;MQ=76.79;MQ0=0;MQRankSum=-9.671;QD=37.83;ReadPosRankSum=0.726;VQSLOD=4.2828;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,102,1575	1/1:0,5:5:15.05:207,15,0	0/0:18,0:18:48.05:0,48,633	0/0:24,0:24:69.19:0,69,1032	1/1:0,32:32:75.03:1000,75,0	1/1:1,14:14:41.93:542,42,0	1/1:2,27:29:81.26:1096,81,0	1/1:0,34:34:99:1410,102,0	1/1:0,22:22:66.22:908,66,0	1/1:1,23:24:72.24:994,72,0	1/1:3,17:20:57.14:751,57,0	1/1:4,30:34:99:1344,99,0	1/1:1,22:23:68.64:856,69,0	1/1:1,24:25:75.25:1035,75,0	1/1:0,24:24:72.20:972,72,0	1/1:0,24:24:72.20:974,72,0	0/0:18,0:18:48.14:0,48,738	0/0:14,0:14:39.12:0,39,598	0/0:23,0:23:69.19:0,69,1024	0/0:39,0:39:99:0,114,1790	0/0:15,0:15:39.12:0,39,585	1/1:1,17:18:45.15:617,45,0	1/1:0,23:23:54.18:732,54,0	1/1:4,19:23:58.53:748,59,0	1/1:2,16:18:54:682,54,0	0/0:15,1:16:6.64:0,7,676	0/0:38,0:38:99:0,114,1691	0/0:4,0:4:12.04:0,12,191
chr10	23532008	.	G	GCCAC	31662.86	PASS	AB=0.963;AC=45;AF=0.804;AN=56;BaseQRankSum=8.341;DP=654;FS=7.258;HRun=0;HaplotypeScore=212.9134;InbreedingCoeff=0.8514;MQ=73.65;MQ0=0;MQRankSum=-16.313;QD=59.29;ReadPosRankSum=3.529;VQSLOD=5.2526;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:93.29:0,93,1638	1/1:1,4:5:15.05:395,15,0	0/0:16,0:16:35.28:0,35,674	0/0:26,0:26:57.80:0,58,923	1/1:3,27:30:72.25:1885,72,0	1/1:2,16:17:42.01:896,42,0	1/1:11,18:30:69.03:1493,69,0	1/1:11,15:26:72.13:1601,72,0	1/1:2,22:26:69.15:1713,69,0	1/1:6,17:23:66.22:1683,66,0	1/1:3,17:20:42.14:1061,42,0	1/1:6,25:31:84.23:2016,84,0	1/1:4,26:32:84.29:2161,84,0	1/1:3,29:32:87.21:2186,87,0	1/1:4,30:35:96.28:2325,96,0	1/1:4,22:27:78.17:1839,78,0	1/1:4,9:14:33.11:789,33,0	1/1:1,11:12:30.10:799,30,0	1/1:11,16:27:63.22:1674,63,0	1/1:1,38:39:99:2708,102,0	1/1:3,6:9:21.07:517,21,0	1/1:3,13:16:36.07:843,36,0	1/1:8,11:19:39.11:870,39,0	1/1:2,17:20:44.49:1185,44,0	1/1:4,13:17:42.10:1014,42,0	0/1:25,1:26:10.61:11,0,1048	0/0:41,0:41:99:0,123,2268	0/0:3,0:3:3.01:0,3,56
chr10	23532860	.	T	TACAC	1210.67	PASS	AB=0.874;AC=19;AF=0.365;AN=52;BaseQRankSum=-0.598;DP=521;FS=0.817;HRun=0;HaplotypeScore=117.1145;InbreedingCoeff=0.3995;MQ=74.08;MQ0=10;MQRankSum=-1.382;QD=5.43;ReadPosRankSum=-1.794;VQSLOD=1.9063;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:34:15.82:16,0,78	0/1:7,0:7:0:0,0,0	./.	./.	0/0:13,0:13:3.01:0,3,46	0/1:24,0:23:9.09:9,0,109	0/0:13,0:12:2.05:0,2,45	1/1:26,0:25:3.15:7,3,0	0/0:14,0:15:14.41:0,14,214	0/0:16,0:15:6.77:0,7,60	0/1:15,0:15:15.99:16,0,22	0/0:13,0:13:6.01:0,6,93	0/0:14,0:15:9.02:0,9,121	0/0:15,0:16:9.02:0,9,139	0/0:18,0:18:15.01:0,15,183	0/0:26,0:27:23.75:0,24,287	1/1:13,0:12:11.99:145,12,0	1/1:9,0:8:6.02:97,6,0	1/1:17,0:17:12.04:198,12,0	1/1:20,0:20:12.03:166,12,0	0/0:14,0:13:0.47:0,0,1	0/0:19,0:20:2.39:0,2,69	0/0:19,0:19:2.67:0,3,11	0/0:15,0:15:6.02:0,6,93	0/0:20,0:23:12.02:0,12,151	1/1:25,0:23:21.44:231,21,0	1/1:7,10:22:14.30:289,14,0	0/1:4,5:9:34.31:199,0,34
chr10	23533011	.	G	GA	1464.03	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-8.158;DP=527;FS=18.113;HRun=8;HaplotypeScore=50.2080;InbreedingCoeff=0.8968;MQ=82.73;MQ0=0;MQRankSum=-0.760;QD=27.62;ReadPosRankSum=-0.696;VQSLOD=1.9625;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:39.02:0,39,357	0/0:7,0:7:14.99:0,15,133	0/0:18,0:17:4.72:0,5,225	0/0:14,0:14:4.21:0,4,170	0/0:26,0:26:72.03:0,72,655	0/0:25,0:25:69.03:0,69,632	0/0:10,0:10:27.01:0,27,247	0/0:27,0:27:63.03:0,63,576	0/0:14,0:14:42.02:0,42,384	0/0:20,1:21:16.40:0,16,402	0/0:29,0:29:72.03:0,72,659	0/0:18,0:18:51.01:0,51,462	0/0:22,0:22:54.02:0,54,494	0/0:21,0:21:60.03:0,60,549	0/0:21,0:21:60.03:0,60,549	0/0:23,0:23:60.03:0,60,549	0/0:17,0:17:48.03:0,48,439	0/0:14,0:15:37.98:0,38,320	0/0:18,0:18:42.01:0,42,384	0/0:19,0:19:54.03:0,54,494	0/0:15,0:15:38.99:0,39,351	0/0:19,0:19:45.02:0,45,412	0/0:23,0:23:66.02:0,66,598	0/0:12,0:12:36.02:0,36,329	0/0:23,0:23:63.03:0,63,577	1/1:1,25:26:72.18:809,72,0	1/1:1,19:20:51.15:589,51,0	1/1:0,7:7:18.05:208,18,0
chr10	23533337	.	T	TTTG	3659.28	PASS	AB=0.645;AC=9;AF=0.161;AN=56;BaseQRankSum=-9.203;DP=641;FS=0.000;HRun=0;HaplotypeScore=88.6073;InbreedingCoeff=0.8492;MQ=72.29;MQ0=3;MQRankSum=-1.164;QD=36.96;ReadPosRankSum=1.219;VQSLOD=4.3899;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:48.02:0,48,645	0/0:5,0:5:12.04:0,12,170	0/0:36,0:26:42.14:0,42,585	0/0:22,0:21:17.22:0,17,254	0/0:38,0:38:99:0,102,1446	0/0:32,0:33:66.17:0,66,896	0/0:23,0:24:13.26:0,13,621	0/0:24,0:24:42.14:0,42,595	0/0:14,0:14:27.09:0,27,383	0/0:28,0:28:48.15:0,48,666	0/0:23,0:24:51.16:0,51,697	0/0:24,0:24:54.18:0,54,766	0/0:23,0:23:69.23:0,69,977	0/0:15,0:15:33.11:0,33,468	0/0:22,0:22:60.19:0,60,834	0/0:21,0:21:57.17:0,57,776	1/1:6,10:17:28.13:654,28,0	1/1:4,12:16:42.14:818,42,0	1/1:10,7:17:24.08:449,24,0	1/1:7,21:29:66.17:1284,66,0	0/1:9,11:20:53.21:454,0,53	0/0:11,0:11:21.07:0,21,298	0/0:31,0:32:66.18:0,66,898	0/0:16,0:16:39.13:0,39,553	0/0:24,0:24:48.15:0,48,666	0/0:42,0:42:99:0,102,1417	0/0:29,0:29:66.20:0,66,901	0/0:12,0:12:18.06:0,18,255
chr10	23534514	.	TAAAGCAAGGTCCCATTACTG	T	7290.43	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=12.360;DP=593;FS=17.374;HRun=0;HaplotypeScore=316.5455;InbreedingCoeff=0.9828;MQ=75.73;MQ0=1;MQRankSum=-9.580;QD=57.86;ReadPosRankSum=0.956;VQSLOD=3.0896;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:5,19:24:42.12:1458,42,0	0/0:15,0:15:45.15:0,45,3863	0/0:22,0:22:60.20:0,60,3593	0/0:19,0:19:54.18:0,54,2565	0/0:25,0:25:72.23:0,72,5937	0/0:30,0:30:87.29:0,87,7632	0/0:23,0:23:69.22:0,69,5822	0/0:27,0:27:72.25:0,72,4889	0/0:21,0:21:63.20:0,63,5137	0/0:17,0:17:45.15:0,45,4032	0/0:27,0:27:78.27:0,78,6588	0/0:23,0:23:66.23:0,66,5787	0/0:18,0:18:54.19:0,54,4768	0/0:24,0:24:72.25:0,72,6368	0/0:22,0:22:63.22:0,63,5451	0/0:23,0:23:69.24:0,69,6144	1/1:5,13:17:18.06:887,18,0	1/1:2,11:13:24.08:1282,24,0	1/1:9,14:23:41.28:1682,41,0	1/1:3,21:24:42.14:1701,42,0	1/1:6,18:24:9.03:280,9,0	0/0:15,0:15:42.14:0,42,3806	0/0:21,0:21:60.21:0,60,5238	0/0:20,0:19:57.18:0,57,4868	0/0:18,0:18:54.16:0,54,4776	0/0:29,0:29:87.30:0,87,7486	0/0:23,0:23:66.23:0,66,5410	0/0:5,0:5:15.05:0,15,1172
chr10	23534697	.	T	TAAA	21472.29	PASS	AB=1.000;AC=53;AF=0.946;AN=56;BaseQRankSum=-4.670;DP=656;FS=15.708;HRun=10;HaplotypeScore=107.7338;InbreedingCoeff=0.6438;MQ=70.27;MQ0=0;MQRankSum=-7.125;QD=33.39;ReadPosRankSum=0.881;VQSLOD=2.6227;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,23:32:52.33:872,52,0	1/1:0,5:5:15.05:288,15,0	0/0:13,0:13:20.68:0,21,217	0/1:21,0:21:16.91:17,0,325	1/1:5,24:32:77.88:1254,78,0	1/1:6,29:36:78.25:1450,78,0	1/1:2,13:18:42.12:770,42,0	1/1:16,27:46:99:1927,107,0	1/1:3,14:17:36.12:673,36,0	1/1:6,8:17:36.06:541,36,0	1/1:7,17:25:51:794,51,0	1/1:7,14:21:26.91:519,27,0	1/1:6,16:24:42.12:758,42,0	1/1:6,11:18:27.07:468,27,0	1/1:6,21:30:66.20:1200,66,0	1/1:5,18:27:51.10:860,51,0	1/1:4,31:39:81.28:1518,81,0	1/1:2,12:14:33.11:635,33,0	1/1:7,11:19:33.10:584,33,0	1/1:7,16:28:60.10:913,60,0	1/1:4,12:18:39:605,39,0	1/1:6,11:20:39.07:645,39,0	1/1:7,13:26:45.02:632,45,0	1/1:2,20:25:51.15:915,51,0	1/1:6,9:17:33.11:562,33,0	1/1:13,1:30:60.15:859,60,0	1/1:11,0:26:54.18:799,54,0	1/1:2,3:12:27.09:415,27,0
chr10	23535252	.	G	GAA	20942.93	PASS	AB=0.920;AC=35;AF=0.625;AN=56;BaseQRankSum=11.896;DP=612;FS=4.027;HRun=1;HaplotypeScore=116.7063;InbreedingCoeff=0.9214;MQ=81.48;MQ0=0;MQRankSum=-6.148;QD=52.49;ReadPosRankSum=0.013;VQSLOD=4.6385;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:75.22:0,75,1163	1/1:0,15:15:42.14:830,42,0	0/0:25,0:25:72.18:0,72,1037	0/0:19,0:19:46.33:0,46,680	1/1:2,25:28:69.10:1315,69,0	1/1:1,25:27:69.24:1401,69,0	1/1:1,13:14:33.11:670,33,0	1/1:6,26:34:99:1947,102,0	1/1:0,18:19:48.16:974,48,0	1/1:1,24:25:75.26:1523,75,0	1/1:2,17:19:57.04:1070,57,0	1/1:0,18:19:54.19:1097,54,0	1/1:2,22:25:69.20:1357,69,0	1/1:1,15:16:48.16:974,48,0	1/1:1,31:32:96.33:1949,96,0	1/1:1,14:15:45.11:871,45,0	0/0:16,0:16:48.16:0,48,780	0/0:18,0:18:54.14:0,54,844	0/0:22,0:22:63.20:0,63,1003	0/0:24,0:24:72.23:0,72,1149	0/0:28,0:28:84.29:0,84,1370	1/1:0,16:16:48.16:975,48,0	1/1:2,24:27:72.20:1419,72,0	1/1:0,23:23:63.17:1239,63,0	1/1:0,21:22:63.22:1279,63,0	0/1:21,2:23:52.74:53,0,959	0/0:31,0:30:93.32:0,93,1514	0/0:5,0:5:15.05:0,15,244
chr10	23535531	.	CT	C	1582.89	PASS	AB=0.894;AC=21;AF=0.375;AN=56;BaseQRankSum=6.621;DP=496;FS=0.000;HRun=14;HaplotypeScore=112.2501;InbreedingCoeff=0.5898;MQ=67.55;MQ0=0;MQRankSum=-9.043;QD=6.91;ReadPosRankSum=2.462;VQSLOD=2.7198;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:15:29.41:0,29,168	0/0:7,1:9:0.43:0,0,144	0/1:13,0:7:4.31:9,0,4	0/1:10,1:10:5:5,0,68	0/1:24,4:28:16.24:16,0,427	0/0:13,0:13:36.01:0,36,323	0/0:21,1:22:24.37:0,24,350	0/0:33,0:33:42.01:0,42,376	0/0:13,0:14:20.83:0,21,172	0/0:16,0:17:29.87:0,30,265	0/0:17,0:17:32.93:0,33,288	0/0:15,1:16:3.43:0,3,167	0/0:13,1:14:9.44:0,9,223	0/0:15,0:15:28.14:0,28,228	0/0:21,1:22:21.46:0,21,338	0/0:10,0:11:17.86:0,18,154	1/1:12,7:21:22.75:150,23,0	1/1:7,6:14:19.80:129,20,0	1/1:4,10:15:6.88:183,7,0	1/1:5,17:25:50.89:324,51,0	1/1:4,2:7:5.91:41,6,0	0/0:21,1:22:18.52:0,19,299	0/0:27,0:27:44.96:0,45,403	0/1:8,2:11:2.55:3,0,121	0/1:12,3:15:28.68:29,0,181	1/1:13,12:29:57.83:357,58,0	1/1:15,18:33:61.21:408,61,0	1/1:1,6:7:17.83:123,18,0
chr10	23538861	.	CA	C	1981.93	PASS	AB=0.974;AC=34;AF=0.607;AN=56;BaseQRankSum=11.235;DP=531;FS=1.670;HRun=1;HaplotypeScore=88.0196;InbreedingCoeff=0.0781;MQ=83.53;MQ0=0;MQRankSum=-3.942;QD=4.56;ReadPosRankSum=7.457;VQSLOD=0.3819;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:20,0:20:9.96:67,0,10	1/1:12,0:12:17.80:50,18,0	0/0:20,0:19:56.70:0,57,671	0/0:18,0:17:42.05:0,42,490	1/1:25,2:27:30.68:197,31,0	1/1:30,0:30:5.08:103,5,0	1/1:13,0:13:1.97:65,2,0	0/1:23,0:23:30.46:30,0,74	1/1:14,0:14:25.48:88,25,0	0/1:11,0:11:12.37:30,0,12	0/1:21,0:21:41.54:42,0,60	0/1:18,0:18:17.25:73,0,17	1/1:27,0:27:22.29:151,22,0	0/1:20,2:22:21.58:132,0,22	1/1:17,1:18:34.55:133,35,0	0/1:19,2:20:35.25:116,0,35	1/1:15,2:17:32.62:145,33,0	1/1:9,0:9:22.35:86,22,0	0/1:19,0:19:32.89:33,0,170	0/1:24,1:25:34.90:147,0,35	0/1:20,0:20:8.50:61,0,9	1/1:19,1:20:19.27:159,19,0	1/1:21,1:22:15.49:124,15,0	0/1:8,0:8:26.79:41,0,27	0/1:16,2:18:15.10:95,0,15	0/0:21,1:22:18.13:0,18,644	0/0:26,0:26:72.20:0,72,942	0/0:10,0:10:30.01:0,30,393
chr10	23538862	.	AC	A	10171.40	PASS	AB=0.926;AC=47;AF=0.839;AN=56;BaseQRankSum=3.261;DP=534;FS=2.740;HRun=8;HaplotypeScore=62.4492;InbreedingCoeff=0.8654;MQ=82.47;MQ0=0;MQRankSum=-5.144;QD=22.11;ReadPosRankSum=1.170;VQSLOD=5.3949;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,18:20:45.07:434,45,0	1/1:0,12:12:30.05:290,30,0	0/0:20,0:19:39.10:0,39,448	0/0:16,0:15:28.88:0,29,302	1/1:4,24:28:75.12:723,75,0	1/1:2,28:30:75.12:724,75,0	1/1:1,12:13:33.05:318,33,0	1/1:4,19:23:54.03:507,54,0	1/1:0,14:14:39.06:376,39,0	1/1:2,9:11:30.03:285,30,0	1/1:4,17:21:45.07:435,45,0	1/1:3,15:18:39.06:376,39,0	1/1:1,25:27:74.15:701,74,0	1/1:4,17:21:48.07:462,48,0	1/1:1,17:18:51.08:492,51,0	1/1:6,15:21:49.89:467,50,0	1/1:2,15:17:39.05:376,39,0	1/1:0,9:9:27.04:259,27,0	1/1:7,11:18:33.05:318,33,0	1/1:6,19:25:60.08:577,60,0	1/1:2,18:20:54.09:521,54,0	1/1:4,17:21:48.07:463,48,0	1/1:2,20:22:48.08:463,48,0	1/1:2,6:8:18.03:174,18,0	1/1:4,14:18:42.07:405,42,0	0/1:23,2:25:23.45:23,0,560	0/0:28,0:28:78.21:0,78,916	0/0:9,0:10:29.96:0,30,341
chr10	23539805	.	G	GA	16807.94	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-12.258;DP=631;FS=0.838;HRun=6;HaplotypeScore=54.5133;InbreedingCoeff=0.9963;MQ=88.70;MQ0=0;MQRankSum=-5.816;QD=32.89;ReadPosRankSum=0.683;VQSLOD=4.8906;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,34:37:99:1245,99,0	1/1:1,7:8:21.07:264,21,0	0/0:28,0:28:66.09:0,66,647	0/0:19,0:19:33.06:0,33,334	1/1:2,33:36:99:1208,102,0	1/1:0,29:29:81.26:1019,81,0	1/1:4,22:26:66.21:827,66,0	1/1:0,26:26:72.22:894,72,0	1/1:1,10:11:30.10:377,30,0	1/1:3,23:26:69.21:856,69,0	1/1:1,24:25:41.63:837,42,0	1/1:2,12:14:33.11:415,33,0	1/1:2,31:33:93.30:1170,93,0	1/1:3,13:16:39.12:487,39,0	1/1:5,17:22:48.15:604,48,0	1/1:1,19:20:54.17:679,54,0	1/1:0,23:23:63.20:793,63,0	1/1:3,13:16:36.11:450,36,0	1/1:3,17:20:51.12:622,51,0	1/1:0,23:23:69.05:796,69,0	1/1:0,8:8:24.08:302,24,0	1/1:1,26:27:72.19:888,72,0	1/1:2,13:15:33.11:414,33,0	1/1:0,21:21:54.17:679,54,0	1/1:2,27:29:78.25:981,78,0	0/0:30,0:30:78.17:0,78,796	0/0:36,0:35:96.16:0,96,957	0/0:7,0:7:18.04:0,18,183
chr10	23540483	.	TTCTGCAAATCA	T	8978.78	PASS	AB=0.524;AC=17;AF=0.304;AN=56;BaseQRankSum=13.943;DP=492;FS=10.240;HRun=0;HaplotypeScore=155.9476;InbreedingCoeff=0.8647;MQ=79.57;MQ0=0;MQRankSum=-13.464;QD=70.15;ReadPosRankSum=2.863;VQSLOD=4.3905;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,9:11:18.06:639,18,0	0/0:16,0:16:48.16:0,48,2720	0/0:16,0:16:45.15:0,45,1999	0/0:12,0:12:30.03:0,30,1301	0/0:30,0:30:90.29:0,90,4781	0/0:23,0:23:66.23:0,66,3768	0/0:14,0:14:42.13:0,42,2136	0/0:24,0:24:72.25:0,72,3910	0/0:17,0:17:51.18:0,51,2774	0/0:18,0:18:54.19:0,54,2951	0/0:20,0:20:60.19:0,60,3126	0/0:18,0:18:54.19:0,54,3041	0/0:25,0:25:72.25:0,72,3661	0/0:20,0:20:60.21:0,60,3300	0/0:18,0:18:54.17:0,54,2612	0/0:16,0:16:48.16:0,48,2540	1/1:2,16:18:27.09:907,27,0	1/1:0,8:8:18.06:602,18,0	1/1:3,8:11:24.05:635,24,0	1/1:3,19:22:54.13:1865,54,0	1/1:5,0:5:3.01:42,3,0	0/0:21,0:21:60.21:0,60,3417	0/0:17,0:17:51.18:0,51,2755	0/0:16,0:16:48.16:0,48,2623	0/0:23,0:23:66.22:0,66,3440	0/1:2,20:22:99:2006,0,115	1/1:3,24:27:57.20:2065,57,0	1/1:2,2:4:6.02:217,6,0
chr10	23540677	.	TA	T	166.15	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-3.509;DP=533;FS=0.000;HRun=10;HaplotypeScore=85.1916;InbreedingCoeff=0.8566;MQ=67.43;MQ0=0;MQRankSum=0.517;QD=13.85;ReadPosRankSum=0.401;VQSLOD=3.7306;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,10:12:29.99:260,30,0	0/0:11,0:11:30.75:0,31,188	0/0:8,0:7:15:0,15,140	0/0:9,0:8:5.12:0,5,53	0/0:34,0:34:85.55:0,86,536	0/0:31,0:31:88.65:0,89,574	0/0:12,0:12:27.76:0,28,167	0/0:28,0:28:70.79:0,71,408	0/0:20,0:20:58.04:0,58,376	0/0:28,0:28:72.26:0,72,412	0/0:24,0:24:61.95:0,62,387	0/0:12,0:12:32.59:0,33,220	0/0:14,0:14:37.15:0,37,255	0/0:16,0:16:44.29:0,44,280	0/0:13,0:13:37:0,37,229	0/0:13,0:13:32.06:0,32,202	0/0:22,0:22:54.10:0,54,582	0/0:6,0:6:18.05:0,18,196	0/0:19,0:19:45.12:0,45,495	0/0:30,1:32:64:0,64,896	0/0:5,0:5:15.04:0,15,166	0/0:22,0:22:65.09:0,65,435	0/0:21,0:21:41.44:0,41,274	0/0:11,0:11:29.53:0,30,187	0/0:29,0:29:85.35:0,85,525	0/0:33,0:33:78.33:0,78,484	0/0:35,0:34:89.60:0,90,629	0/0:13,0:13:38.37:0,38,241
chr10	23541879	.	G	GC	21170.46	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=4.155;DP=523;FS=2.820;HRun=0;HaplotypeScore=123.1518;InbreedingCoeff=0.9777;MQ=92.21;MQ0=0;MQRankSum=-10.490;QD=44.38;ReadPosRankSum=5.925;VQSLOD=3.8585;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,28:29:78.27:1247,78,0	1/1:0,6:6:18.06:288,18,0	0/0:21,0:21:63.19:0,63,850	0/0:25,0:25:65.42:0,65,840	1/1:0,20:20:54.18:863,54,0	1/1:0,17:17:48.16:767,48,0	1/1:1,16:17:43.39:715,43,0	1/1:1,20:21:60.20:953,60,0	1/1:0,18:18:54.18:863,54,0	1/1:1,19:20:57.19:910,57,0	1/1:0,22:22:63.21:1007,63,0	1/1:0,18:18:45.15:719,45,0	1/1:0,28:28:84.29:1339,84,0	1/1:0,11:11:30.10:480,30,0	1/1:0,10:10:30.10:480,30,0	1/1:0,15:15:42.14:671,42,0	1/1:1,35:36:96.33:1535,96,0	1/1:2,7:9:21.07:331,21,0	1/1:2,14:16:48.16:767,48,0	1/1:0,15:15:42.14:671,42,0	1/1:0,19:19:57.19:911,57,0	1/1:0,18:18:45.15:719,45,0	1/1:0,24:24:60.20:956,60,0	1/1:1,14:15:39.13:623,39,0	1/1:1,18:19:54.18:863,54,0	1/1:2,19:21:57.19:911,57,0	1/1:0,29:29:87.30:1391,87,0	1/1:0,4:4:12.04:192,12,0
chr10	23542192	.	TA	T	11238.53	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-3.258;DP=444;FS=9.920;HRun=7;HaplotypeScore=50.0737;InbreedingCoeff=0.9780;MQ=81.81;MQ0=0;MQRankSum=-5.558;QD=27.41;ReadPosRankSum=4.811;VQSLOD=4.8758;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:8:21.07:0,21,264	1/1:0,10:10:27.06:275,27,0	0/0:10,0:10:26.96:0,27,262	0/0:16,0:16:20.70:0,21,333	1/1:3,20:23:60.13:612,60,0	1/1:2,19:21:57.13:582,57,0	1/1:3,7:10:21.05:214,21,0	1/1:0,25:25:74.94:735,75,0	1/1:1,9:10:24.05:245,24,0	1/1:1,20:21:60.13:607,60,0	1/1:0,24:24:72.16:734,72,0	1/1:0,17:17:51.12:520,51,0	1/1:0,15:15:45.10:459,45,0	1/1:2,9:11:21.05:214,21,0	1/1:0,11:11:27.06:275,27,0	1/1:2,12:14:36.08:367,36,0	1/1:2,19:21:57.13:581,57,0	1/1:0,5:5:15.03:153,15,0	1/1:1,18:19:54.11:545,54,0	1/1:2,20:21:54.08:540,54,0	1/1:1,5:6:15.03:153,15,0	1/1:1,17:18:51.12:520,51,0	1/1:2,14:16:39.09:397,39,0	1/1:0,7:7:18.04:184,18,0	1/1:1,15:16:45.10:459,45,0	1/1:0,21:21:63.14:643,63,0	1/1:4,30:34:90.20:917,90,0	1/1:0,13:13:30.07:306,30,0
chr10	23542581	.	G	GTA	6030.42	PASS	AC=44;AF=0.815;AN=54;BaseQRankSum=3.632;DP=323;FS=2.233;HRun=0;HaplotypeScore=70.5200;InbreedingCoeff=0.6893;MQ=75.42;MQ0=3;MQRankSum=-2.312;QD=25.77;ReadPosRankSum=0.192;VQSLOD=5.6463;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:7,5:12:18.06:266,18,0	1/1:5,2:7:12.04:203,12,0	0/0:18,0:11:5.55:0,6,42	0/0:16,0:5:5.30:0,5,40	1/1:10,4:14:12:202,12,0	1/1:3,11:14:3.01:51,3,0	1/1:2,2:4:3.01:51,3,0	1/1:3,32:35:96.80:1581,97,0	1/1:8,2:10:12.04:203,12,0	1/1:9,8:17:45.15:768,45,0	1/1:5,2:7:6.02:98,6,0	./.	1/1:7,2:9:18.04:276,18,0	1/1:9,1:10:8.90:154,9,0	1/1:12,5:17:33.11:532,33,0	1/1:5,0:5:9.03:140,9,0	1/1:0,1:13:24:232,24,0	1/1:3,0:9:20.85:175,21,0	1/1:3,0:11:21.87:182,22,0	1/1:1,0:9:11.60:90,12,0	1/1:3,0:5:3.88:26,4,0	1/1:1,2:3:3.01:34,3,0	1/1:1,3:5:3.01:51,3,0	1/1:0,3:3:9.03:138,9,0	1/1:9,4:13:36.11:576,36,0	0/0:23,0:23:60.18:0,60,763	0/0:11,0:10:27.09:0,27,355	0/0:14,0:14:27.09:0,27,352
chr10	23542599	.	C	CAG	73.74	PASS	AB=1.000;AC=15;AF=0.357;AN=42;BaseQRankSum=-2.687;DP=319;FS=25.564;HRun=0;HaplotypeScore=79.3500;InbreedingCoeff=0.1651;MQ=51.47;MQ0=14;MQRankSum=1.068;QD=0.46;ReadPosRankSum=-0.258;VQSLOD=-0.0518;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:12,0:9:0.02:0,0,0	0/0:6,0:6:8.52:0,9,42	./.	./.	0/0:7,0:7:0.89:0,1,2	0/0:16,0:16:1.25:0,1,3	./.	1/1:30,0:27:2.22:7,2,0	0/0:9,0:9:2.84:0,3,14	0/0:21,0:21:5.41:0,5,27	0/0:9,0:9:5.60:0,6,27	./.	0/1:6,0:6:0:0,0,0	0/0:9,0:8:2.66:0,3,13	0/1:13,0:13:8.92:11,0,9	0/1:7,0:6:0:0,0,0	0/1:11,0:11:0:0,0,0	0/0:9,0:8:2.68:0,3,13	1/1:9,0:8:0.47:1,0,0	0/1:10,0:9:0:0,0,0	./.	./.	0/1:9,0:8:0:0,0,0	./.	0/0:15,0:15:2.47:0,2,9	0/1:19,0:19:32.78:33,0,86	0/1:19,0:18:39.41:72,0,39	1/1:8,6:13:2.52:43,3,0
chr10	23542638	.	AGAGAGAGAGG	A	4585.98	PASS	AB=1.000;AC=36;AF=0.643;AN=56;BaseQRankSum=-1.151;DP=413;FS=18.465;HRun=0;HaplotypeScore=114.0980;InbreedingCoeff=0.3120;MQ=65.41;MQ0=19;MQRankSum=-1.304;QD=17.18;ReadPosRankSum=1.192;VQSLOD=2.4119;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:11,0:10:23.54:24,0,49	1/1:3,3:6:14.98:335,15,0	0/0:42,0:20:41.52:0,42,446	0/0:49,0:15:18.28:0,18,175	1/1:12,2:14:17.90:277,18,0	1/1:18,0:17:24.42:276,24,0	1/1:7,0:7:14.97:124,15,0	1/1:27,0:25:65.72:580,66,0	1/1:8,3:11:12.01:195,12,0	1/1:12,2:14:26.96:374,27,0	1/1:9,2:11:18.01:308,18,0	1/1:7,0:7:6:52,6,0	0/1:8,0:8:13.96:114,0,14	1/1:12,1:12:20.99:249,21,0	1/1:10,3:13:17.93:389,18,0	1/1:12,0:11:21.02:299,21,0	0/1:13,0:12:29.78:154,0,30	0/1:10,0:9:27.66:57,0,28	0/1:16,0:14:42.58:261,0,43	0/1:11,0:11:7:105,0,7	0/1:7,0:7:18.91:20,0,19	1/1:7,0:6:8.99:76,9,0	0/1:13,0:11:17.10:17,0,35	0/0:3,0:3:3.01:0,3,47	1/1:17,1:18:23.70:300,24,0	0/0:23,0:22:61.60:0,62,1721	0/0:17,0:16:39.11:0,39,1143	0/0:12,0:9:6.02:0,6,210
chr10	23542648	.	GGA	G	106.97	PASS	AB=1.000;AC=27;AF=0.563;AN=48;BaseQRankSum=5.683;DP=348;FS=10.892;HRun=0;HaplotypeScore=81.5127;InbreedingCoeff=0.4467;MQ=76.75;MQ0=13;MQRankSum=-4.242;QD=0.87;ReadPosRankSum=3.814;VQSLOD=0.3453;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,5:8:6.02:72,6,0	1/1:5,0:5:4.25:30,4,0	0/0:46,0:24:51.60:0,52,890	0/0:51,0:17:24.08:0,24,433	1/1:11,0:11:2.96:10,3,0	1/1:12,0:11:3.85:12,4,0	./.	0/0:25,0:25:1.46:0,1,4	1/1:8,0:8:2.74:12,3,0	1/1:8,0:8:4.44:22,4,0	1/1:14,0:14:4.37:22,4,0	./.	1/1:7,0:7:2.04:6,2,0	0/1:10,0:10:6.51:7,0,19	1/1:10,0:10:6.04:22,6,0	0/0:7,0:7:0.70:0,1,2	0/0:10,0:9:1.36:0,1,3	1/1:8,0:8:0.75:9,1,0	0/0:13,0:12:1.41:0,1,3	1/1:8,0:8:0.47:1,0,0	1/1:3,0:3:2.22:7,2,0	./.	./.	0/0:4,0:4:0.47:0,0,1	1/1:10,0:10:1.63:10,2,0	0/0:19,0:18:51.09:0,51,775	0/0:19,0:18:38.08:0,38,552	0/0:9,0:7:6.01:0,6,71
chr10	23542704	.	GA	G	4551.25	PASS	AB=0.703;AC=33;AF=0.589;AN=56;BaseQRankSum=-9.034;DP=392;FS=10.100;HRun=11;HaplotypeScore=61.7156;InbreedingCoeff=0.8097;MQ=68.87;MQ0=1;MQRankSum=0.572;QD=18.35;ReadPosRankSum=2.515;VQSLOD=5.6789;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:7,0:7:3.12:15,0,3	1/1:1,7:9:20.97:172,21,0	0/0:15,1:9:5.88:0,6,47	0/0:6,0:6:8.86:0,9,78	1/1:2,16:19:43.91:350,44,0	1/1:1,11:12:32.95:271,33,0	1/1:2,8:10:23.96:197,24,0	1/1:7,25:32:73.02:626,73,0	1/1:3,7:10:17.96:148,18,0	1/1:6,11:18:12.35:250,12,0	1/1:2,21:23:27.92:436,28,0	1/1:1,8:9:23.97:197,24,0	1/1:1,9:10:17.98:148,18,0	1/1:2,14:16:41.95:345,42,0	1/1:1,8:9:23.97:197,24,0	1/1:2,11:13:29.96:246,30,0	0/0:4,0:19:40.86:0,41,219	0/0:1,0:5:12.78:0,13,78	0/0:2,0:16:30.08:0,30,154	0/0:3,0:19:35.53:0,36,185	0/0:1,0:6:17.21:0,17,103	0/1:1,9:10:2.02:192,0,2	0/1:4,10:14:5.02:170,0,5	1/1:0,11:11:32.96:271,33,0	1/1:1,15:16:38.94:320,39,0	0/0:7,0:22:42.74:0,43,254	0/0:2,0:21:53.98:0,54,269	0/0:0,0:13:31.04:0,31,152
chr10	23543681	.	G	GAA	9004.93	PASS	AB=0.778;AC=45;AF=0.804;AN=56;BaseQRankSum=3.754;DP=572;FS=0.459;HRun=2;HaplotypeScore=135.2277;InbreedingCoeff=0.6356;MQ=59.82;MQ0=10;MQRankSum=0.274;QD=18.19;ReadPosRankSum=1.548;VQSLOD=2.5500;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:32,0:31:78.48:549,78,0	0/1:5,4:9:0.13:264,0,0	0/0:20,0:13:11.83:0,12,239	0/0:25,0:10:16.77:0,17,166	1/1:10,17:27:56.05:487,56,0	1/1:3,21:25:18.06:259,18,0	1/1:1,18:19:6.02:93,6,0	1/1:36,0:35:98.50:857,98,0	1/1:4,18:22:14.57:379,15,0	1/1:6,20:26:60.71:608,61,0	1/1:1,16:17:38.73:386,39,0	1/1:5,15:20:24.33:383,24,0	1/1:3,23:26:22.79:435,23,0	1/1:13,1:14:12.94:326,13,0	1/1:21,4:23:40.83:434,41,0	1/1:1,11:13:18.01:256,18,0	1/1:16,1:16:14.43:252,14,0	1/1:13,2:14:30.94:359,31,0	1/1:13,0:11:8:220,8,0	1/1:29,0:29:43.06:511,43,0	1/1:7,0:7:17.94:148,18,0	1/1:12,6:18:44.20:587,44,0	1/1:16,6:22:19.23:531,19,0	1/1:5,21:26:8.46:169,8,0	0/1:15,7:21:27.06:486,0,27	0/1:13,2:15:25.73:26,0,297	0/0:22,0:22:40.10:0,40,425	0/0:10,0:9:23.87:0,24,203
chr10	23543743	.	AG	A	863.44	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=6.235;DP=572;FS=9.434;HRun=1;HaplotypeScore=140.9802;InbreedingCoeff=0.9462;MQ=59.76;MQ0=9;MQRankSum=-4.206;QD=10.04;ReadPosRankSum=1.673;VQSLOD=0.9192;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:26:65.99:0,66,957	0/0:16,0:16:48.16:0,48,757	0/0:34,0:18:19.34:0,19,593	0/0:51,0:22:53.53:0,54,744	0/0:27,0:26:68.95:0,69,1078	0/0:27,0:27:69.22:0,69,1066	0/0:14,0:14:39.06:0,39,580	0/0:21,0:21:63.17:0,63,907	0/0:13,0:13:39.13:0,39,623	0/0:22,0:21:63.18:0,63,960	0/0:16,0:16:42.12:0,42,657	0/0:17,0:17:45.14:0,45,672	0/0:15,0:15:36.08:0,36,511	0/0:15,0:15:45.15:0,45,718	0/0:30,0:30:40.42:0,40,1027	0/0:12,0:12:30.09:0,30,456	1/1:24,1:24:63.93:383,64,0	1/1:9,1:10:2.54:85,3,0	1/1:18,0:17:30.63:164,31,0	1/1:17,2:19:41.32:232,41,0	1/1:14,0:14:30.97:167,31,0	0/0:19,0:19:54.18:0,54,863	0/0:17,0:17:45.15:0,45,718	0/0:24,0:24:59.78:0,60,849	0/0:22,0:22:62.94:0,63,943	0/0:17,0:17:45.11:0,45,691	0/0:26,0:26:74.83:0,75,1114	0/0:4,0:4:12.04:0,12,192
chr10	23543744	.	GA	G	2312.76	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=3.458;DP=564;FS=8.483;HRun=2;HaplotypeScore=133.2376;InbreedingCoeff=0.9892;MQ=59.99;MQ0=9;MQRankSum=-4.508;QD=27.21;ReadPosRankSum=2.070;VQSLOD=2.6739;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:25:60.12:0,60,851	0/0:16,0:16:48.10:0,48,672	0/0:34,0:18:40.13:0,40,565	0/0:50,0:22:54.03:0,54,669	0/0:26,0:25:69.23:0,69,1026	0/0:28,0:28:69.22:0,69,1008	0/0:13,0:13:36.12:0,36,524	0/0:22,0:22:66.20:0,66,942	0/0:13,0:13:39.13:0,39,584	0/0:21,0:20:57.19:0,57,854	0/0:16,0:16:42.10:0,42,603	0/0:17,0:17:41.92:0,42,571	0/0:15,0:15:30.05:0,30,406	0/0:15,0:15:45.15:0,45,674	0/0:30,0:30:75.90:0,76,1024	0/0:12,0:12:30.10:0,30,443	1/1:2,22:23:65.88:828,66,0	1/1:3,7:10:15.56:198,16,0	1/1:3,15:17:39.13:505,39,0	1/1:3,16:19:41.86:518,42,0	1/1:1,13:14:35.79:438,36,0	0/0:18,0:18:54.18:0,54,808	0/0:17,0:17:45.15:0,45,662	0/0:24,0:24:57.06:0,57,770	0/0:22,0:22:60.19:0,60,875	0/0:16,0:16:45.14:0,45,643	0/0:24,0:24:72.20:0,72,1042	0/0:4,0:4:12.04:0,12,180
chr10	23543861	.	TTG	T	11711.46	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=3.623;DP=614;FS=0.000;HRun=0;HaplotypeScore=131.7363;InbreedingCoeff=0.9894;MQ=60.88;MQ0=2;MQRankSum=0.029;QD=25.24;ReadPosRankSum=1.997;VQSLOD=5.7165;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:31:47.13:0,47,441	1/1:1,9:10:21.02:245,21,0	0/0:29,0:24:32.18:0,32,695	0/0:31,0:21:38.75:0,39,535	1/1:3,20:23:57.14:701,57,0	1/1:8,18:26:48.01:556,48,0	1/1:4,16:20:36.12:458,36,0	1/1:8,17:25:51.15:635,51,0	1/1:6,16:22:38.99:460,39,0	1/1:4,19:23:45.07:660,45,0	1/1:5,22:27:54.01:624,54,0	1/1:6,17:23:44.98:515,45,0	1/1:2,18:20:45.11:551,45,0	1/1:5,15:20:45.06:532,45,0	1/1:4,28:32:57.10:689,57,0	1/1:2,11:13:30.04:364,30,0	1/1:5,12:17:33.43:431,33,0	1/1:5,2:7:12.04:153,12,0	1/1:8,14:20:41.68:470,42,0	1/1:7,9:16:35.98:392,36,0	1/1:6,27:33:57.16:720,57,0	1/1:2,18:20:50.80:587,51,0	1/1:5,9:14:36.09:433,36,0	1/1:5,14:19:54.14:652,54,0	1/1:6,26:32:75.10:886,75,0	0/0:19,0:19:51.17:0,51,850	0/0:28,0:28:60.05:0,60,894	0/0:11,0:11:15.05:0,15,230
chr10	23543895	.	CTG	C	2091.12	PASS	AB=0.848;AC=46;AF=0.920;AN=50;BaseQRankSum=-0.684;DP=575;FS=8.300;HRun=0;HaplotypeScore=178.6673;InbreedingCoeff=0.1103;MQ=52.25;MQ0=16;MQRankSum=-0.958;QD=4.60;ReadPosRankSum=-0.883;VQSLOD=2.2089;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:26:0.47:1,0,0	1/1:5,1:6:6.02:64,6,0	./.	./.	1/1:19,3:22:15.04:162,15,0	1/1:19,2:21:5.72:56,6,0	1/1:14,2:18:11.69:93,12,0	0/0:29,0:28:0:0,0,0	1/1:15,3:20:14.81:142,15,0	1/1:22,1:22:3:32,3,0	1/1:20,5:26:21:218,21,0	1/1:14,1:20:19.19:106,19,0	1/1:13,4:18:17.88:175,18,0	1/1:16,0:20:10.89:50,11,0	1/1:17,5:22:12.03:130,12,0	1/1:11,3:16:11.86:111,12,0	1/1:18,0:22:15.36:68,15,0	1/1:6,0:7:2.84:14,3,0	1/1:18,0:19:8.36:39,8,0	1/1:8,0:16:19.89:98,20,0	./.	1/1:17,4:20:8.97:92,9,0	0/1:14,5:18:15.25:92,0,15	0/1:17,2:19:13.95:85,0,14	1/1:22,6:28:21.02:215,21,0	1/1:13,0:19:8.52:42,9,0	1/1:8,0:19:18.97:89,19,0	1/1:1,0:6:2.84:14,3,0
chr10	23544038	.	A	ATG	549.65	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.741;DP=554;FS=6.428;HRun=0;HaplotypeScore=81.2809;InbreedingCoeff=0.8618;MQ=65.80;MQ0=0;MQRankSum=-4.673;QD=20.36;ReadPosRankSum=-0.690;VQSLOD=3.1743;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:11,16:27:42.05:644,42,0	0/0:12,0:12:30.03:0,30,382	0/0:14,0:15:6.17:0,6,316	0/0:10,0:10:12.92:0,13,151	0/0:31,0:31:87.27:0,87,1095	0/0:16,0:16:48.14:0,48,594	0/0:16,0:16:36.11:0,36,455	0/0:17,0:17:48.08:0,48,546	0/0:19,0:19:48.14:0,48,596	0/0:28,0:27:75.23:0,75,945	0/0:30,0:30:75.22:0,75,939	0/0:15,0:15:45.12:0,45,547	0/0:21,0:21:57.18:0,57,725	0/0:14,0:14:39.12:0,39,496	0/0:23,0:23:48.14:0,48,599	0/0:16,0:16:39.12:0,39,496	0/0:20,0:20:36.11:0,36,458	0/0:12,0:12:33.09:0,33,405	0/0:18,0:19:47.98:0,48,576	0/0:33,0:33:87.26:0,87,1083	0/0:6,0:6:12.03:0,12,140	0/0:17,0:17:51.16:0,51,649	0/0:22,0:22:54.10:0,54,629	0/0:23,0:23:51.16:0,51,648	0/0:22,0:22:54.17:0,54,687	0/0:26,1:27:31.07:0,31,932	0/0:23,0:24:55.81:0,56,848	0/0:19,0:19:51.16:0,51,649
chr10	23544064	.	CT	C	2179.98	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=6.075;DP=563;FS=0.000;HRun=10;HaplotypeScore=71.5558;InbreedingCoeff=0.9951;MQ=69.56;MQ0=0;MQRankSum=-2.121;QD=19.12;ReadPosRankSum=-0.718;VQSLOD=3.9666;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,18:21:44.99:390,45,0	0/0:11,0:11:30.08:0,30,332	0/0:24,0:23:32.69:0,33,287	0/0:18,0:16:20.10:0,20,273	0/0:33,0:33:81.19:0,81,879	0/0:23,0:24:59.99:0,60,643	0/0:11,0:11:33.09:0,33,365	0/0:27,1:28:35.99:0,36,635	0/0:14,0:14:39.11:0,39,431	0/0:26,0:25:63.16:0,63,688	0/0:27,0:27:54.45:0,54,674	0/0:15,0:15:36.08:0,36,382	0/0:22,0:22:54.12:0,54,579	0/0:18,0:18:54.13:0,54,587	0/0:14,2:16:18.28:0,18,412	0/0:15,0:15:36.09:0,36,390	1/1:2,13:15:35.99:313,36,0	1/1:5,7:12:20.99:182,21,0	1/1:4,22:25:62.96:546,63,0	1/1:2,30:32:83.98:729,84,0	1/1:0,8:8:24:208,24,0	0/0:14,0:14:36.10:0,36,396	0/0:19,0:20:47.96:0,48,512	0/0:22,0:22:22.02:0,22,559	0/0:20,1:21:34.11:0,34,604	0/0:28,0:28:68.64:0,69,360	0/0:26,0:26:67.61:0,68,417	0/0:16,0:16:35.91:0,36,229
chr10	23544397	.	CT	C	1546.61	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=6.051;DP=447;FS=1.094;HRun=7;HaplotypeScore=49.5709;InbreedingCoeff=0.9577;MQ=71.68;MQ0=0;MQRankSum=0.992;QD=22.41;ReadPosRankSum=-1.074;VQSLOD=2.6970;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:42.11:0,42,513	0/0:7,0:7:21.07:0,21,264	0/0:6,0:6:13.59:0,14,144	0/0:6,0:6:6:0,6,62	0/0:28,0:28:81.26:0,81,1018	0/0:25,0:25:69.22:0,69,866	0/0:5,0:5:15.05:0,15,189	0/0:33,0:33:90.28:0,90,1121	0/0:19,0:19:54.16:0,54,666	0/0:20,1:21:29.57:0,30,675	0/0:18,0:18:48.15:0,48,604	0/0:11,0:11:30.08:0,30,364	0/0:11,0:11:33.11:0,33,415	0/0:13,0:13:39.11:0,39,477	0/0:19,0:19:54.15:0,54,653	0/0:18,0:18:54.17:0,54,679	1/1:0,14:14:30.07:306,30,0	1/1:1,9:10:24.05:245,24,0	1/1:2,18:20:33.36:527,33,0	1/1:1,18:19:51.11:519,51,0	1/1:1,5:6:12.02:122,12,0	0/0:11,0:11:30.10:0,30,377	0/0:17,0:17:42.13:0,42,528	0/0:11,0:11:33.11:0,33,415	0/0:21,0:21:57.18:0,57,717	0/0:25,0:25:75.24:0,75,938	0/0:31,0:31:90.26:0,90,1112	0/0:8,0:8:24.08:0,24,302
chr10	23545358	.	C	CA	19577.16	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-12.744;DP=750;FS=18.532;HRun=6;HaplotypeScore=69.4156;InbreedingCoeff=0.9986;MQ=60.01;MQ0=1;MQRankSum=3.280;QD=31.53;ReadPosRankSum=1.999;VQSLOD=3.2534;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,29:35:54.21:883,54,0	1/1:2,9:11:27.09:340,27,0	0/0:20,0:15:42.02:0,42,401	0/0:21,0:16:41.82:0,42,400	1/1:2,31:33:87.24:1073,87,0	1/1:4,21:25:63.17:776,63,0	1/1:1,20:21:60.06:732,60,0	1/1:2,46:48:99:1643,132,0	1/1:3,17:20:45.14:566,45,0	1/1:3,32:35:99:1230,99,0	1/1:4,26:30:78.21:962,78,0	1/1:1,24:25:54.17:680,54,0	1/1:3,29:32:72.23:906,72,0	1/1:4,18:22:48.15:596,48,0	1/1:1,29:30:81.26:1019,81,0	1/1:0,17:17:51.16:642,51,0	1/1:5,28:33:84.06:1031,84,0	1/1:3,27:31:78.25:981,78,0	1/1:3,16:19:45.14:566,45,0	1/1:4,28:32:78.21:963,78,0	1/1:1,12:13:33.11:415,33,0	1/1:0,27:27:78.25:981,78,0	1/1:3,26:29:72.22:895,72,0	1/1:2,20:22:51.16:642,51,0	1/1:0,31:31:84.27:1057,84,0	0/0:33,2:35:20.73:0,21,843	0/0:34,0:34:93.21:0,93,948	0/0:18,0:18:42.09:0,42,428
chr10	23546355	.	TAA	T	7462.86	PASS	AB=0.541;AC=47;AF=0.839;AN=56;BaseQRankSum=2.020;DP=570;FS=12.446;HRun=13;HaplotypeScore=125.2226;InbreedingCoeff=0.8207;MQ=68.78;MQ0=6;MQRankSum=0.501;QD=16.40;ReadPosRankSum=3.459;VQSLOD=2.4220;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,21:29:14.99:424,15,0	1/1:2,9:11:27.04:262,27,0	0/0:40,0:14:23.69:0,24,208	0/0:31,0:18:27.58:0,28,259	1/1:2,19:21:54.04:524,54,0	1/1:3,12:18:33.34:337,33,0	1/1:1,14:17:44.29:385,44,0	1/1:9,14:25:47.43:423,47,0	1/1:3,11:14:30.04:291,30,0	1/1:3,20:23:60.07:581,60,0	1/1:4,11:15:29.96:281,30,0	1/1:1,14:15:36.06:349,36,0	1/1:4,16:20:35.97:399,36,0	1/1:6,17:24:54.05:518,54,0	1/1:2,7:9:18.02:175,18,0	1/1:5,12:17:33.02:320,33,0	1/1:20,0:20:33.42:114,33,0	1/1:17,0:17:26.77:107,27,0	1/1:23,0:23:2.96:98,3,0	1/1:30,0:30:59.53:249,60,0	1/1:16,0:16:26.20:90,26,0	1/1:1,16:17:36:349,36,0	1/1:1,19:20:54.08:524,54,0	1/1:3,12:15:28.99:289,29,0	1/1:3,14:17:36.03:349,36,0	0/0:10,1:30:26.24:0,26,185	0/1:3,2:20:24.68:25,0,61	0/0:1,0:12:27.94:0,28,109
chr10	23546366	.	AAAC	A	3579.21	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=-8.314;DP=566;FS=17.179;HRun=0;HaplotypeScore=148.4901;InbreedingCoeff=0.8673;MQ=70.38;MQ0=5;MQRankSum=-3.682;QD=29.83;ReadPosRankSum=-0.679;VQSLOD=2.6098;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:29.18:0,29,244	0/0:11,0:11:30.11:0,30,162	0/0:42,0:15:28.64:0,29,308	0/0:34,0:22:31.62:0,32,455	0/0:25,0:25:69.05:0,69,406	0/0:16,0:16:21.65:0,22,157	0/1:18,0:17:3.79:4,0,102	0/0:22,0:22:0.72:0,1,206	0/0:13,0:13:32.78:0,33,160	0/0:23,0:23:34.37:0,34,262	0/0:17,0:17:44.49:0,44,244	0/0:15,0:15:35.13:0,35,156	0/0:21,0:21:47.48:0,47,266	0/0:22,0:22:29.76:0,30,257	0/0:10,0:10:25.06:0,25,142	0/0:13,0:13:32.45:0,32,144	1/1:1,16:17:30.92:637,31,0	1/1:0,14:14:33.11:509,33,0	1/1:2,22:24:51.06:770,51,0	1/1:3,26:29:81.09:1146,81,0	1/1:0,18:18:33.11:513,33,0	0/0:20,0:20:49.94:0,50,265	0/0:21,0:21:41.12:0,41,222	0/0:17,0:17:23.43:0,23,197	0/0:18,0:18:40.05:0,40,222	0/0:28,0:27:80.82:0,81,857	0/0:19,0:20:36.79:0,37,418	0/0:12,0:12:33.06:0,33,341
chr10	23546786	.	A	AC	81.20	PASS	AB=0.692;AC=1;AF=0.018;AN=56;BaseQRankSum=-2.938;DP=626;FS=11.774;HRun=1;HaplotypeScore=102.1191;InbreedingCoeff=-0.0182;MQ=67.36;MQ0=0;MQRankSum=-2.969;QD=9.02;ReadPosRankSum=-0.209;VQSLOD=-0.0460;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:18:38.35:0,38,639	0/0:11,0:11:33.11:0,33,449	0/0:20,0:17:51.17:0,51,687	0/0:19,0:19:42.98:0,43,529	0/0:31,0:31:93.28:0,93,1250	0/0:38,0:38:99:0,111,1551	0/0:14,0:14:42.13:0,42,572	0/0:30,0:30:90.29:0,90,1234	0/0:22,0:22:63.21:0,63,881	0/0:27,0:27:78.25:0,78,1076	0/0:37,0:37:99:0,108,1490	0/0:20,0:20:60.18:0,60,802	0/0:22,0:22:66.21:0,66,905	0/0:29,0:29:87.28:0,87,1193	0/0:25,0:25:72.22:0,72,961	0/0:19,0:19:57.18:0,57,780	0/0:10,0:10:30.02:0,30,379	0/0:11,0:11:33.11:0,33,461	0/0:17,0:16:48.15:0,48,655	0/0:33,0:33:99:0,99,1367	0/0:25,0:24:72.24:0,72,1006	0/0:17,0:17:51.16:0,51,698	0/0:22,0:22:66.21:0,66,907	0/0:18,0:18:51.16:0,51,697	0/0:20,0:20:60.19:0,60,821	0/0:24,0:24:63.21:0,63,878	0/0:37,0:37:99:0,111,1485	0/1:5,4:9:99:156,0,182
chr10	23547406	.	CT	C	3491.35	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=13.303;DP=573;FS=1.315;HRun=3;HaplotypeScore=67.9970;InbreedingCoeff=0.9996;MQ=71.04;MQ0=0;MQRankSum=2.410;QD=34.91;ReadPosRankSum=1.529;VQSLOD=4.3429;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:72.03:0,72,938	0/0:13,0:13:39.13:0,39,561	0/0:28,0:23:66.13:0,66,851	0/0:14,0:13:33.01:0,33,386	0/0:20,0:20:60.19:0,60,838	0/0:23,0:23:66.19:0,66,899	0/0:10,0:10:30.06:0,30,366	0/0:25,0:25:69.23:0,69,977	0/0:17,0:17:51.16:0,51,716	0/0:24,0:24:69.23:0,69,977	0/0:33,0:33:99:0,99,1392	0/0:12,0:12:36.12:0,36,518	0/0:19,0:19:57.16:0,57,767	0/0:19,0:19:54.18:0,54,775	0/0:14,0:14:39.12:0,39,545	0/0:15,0:15:42.13:0,42,586	1/1:0,17:17:48.01:574,48,0	1/1:2,15:17:48.12:578,48,0	1/1:0,12:12:36.06:427,36,0	1/1:0,41:41:99:1431,120,0	1/1:0,13:13:39.12:482,39,0	0/0:25,0:25:75.24:0,75,1059	0/0:24,0:24:72.19:0,72,936	0/0:11,0:11:33.05:0,33,430	0/0:21,0:21:63.21:0,63,891	0/0:22,0:22:63.19:0,63,872	0/0:35,0:35:99:0,105,1451	0/0:22,0:22:58.39:0,58,891
chr10	23547909	.	GA	G	3198.85	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-1.145;DP=554;FS=5.909;HRun=9;HaplotypeScore=74.2818;InbreedingCoeff=0.9829;MQ=59.21;MQ0=0;MQRankSum=0.926;QD=19.04;ReadPosRankSum=0.452;VQSLOD=3.8856;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,23:26:57.02:520,57,0	0/0:5,0:5:15.04:0,15,173	0/0:18,0:15:30.04:0,30,318	0/0:10,0:6:9.02:0,9,104	0/0:34,0:34:99:0,99,1134	0/0:20,0:20:57.15:0,57,647	0/0:10,0:10:27.08:0,27,312	0/0:27,0:27:72.21:0,72,824	0/0:23,0:24:63.02:0,63,706	0/0:31,0:31:75.22:0,75,866	0/0:27,0:27:69.21:0,69,796	0/0:14,0:14:39.12:0,39,450	0/0:16,0:16:42.11:0,42,470	0/0:17,0:17:51.11:0,51,573	0/0:20,0:20:54.12:0,54,608	0/0:25,0:25:69.21:0,69,796	1/1:3,9:12:26.38:228,26,0	1/1:3,16:20:39.86:340,40,0	1/1:2,12:14:36.02:329,36,0	1/1:5,24:29:69.03:631,69,0	1/1:0,8:8:18.01:165,18,0	0/0:26,0:26:72.19:0,72,811	0/0:28,0:28:69.20:0,69,791	0/0:8,0:8:18.05:0,18,208	0/0:25,1:26:44.74:0,45,761	1/1:5,21:26:31.39:537,31,0	1/1:4,23:27:38.62:525,39,0	1/1:0,6:6:15.01:137,15,0
chr10	23548888	.	CA	C	1988.13	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=2.558;DP=584;FS=2.931;HRun=5;HaplotypeScore=103.1030;InbreedingCoeff=0.9956;MQ=58.70;MQ0=0;MQRankSum=-8.639;QD=26.51;ReadPosRankSum=-1.150;VQSLOD=2.3795;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:78.20:0,78,1029	0/0:11,0:11:33.08:0,33,432	0/0:22,0:20:54.15:0,54,712	0/0:20,0:18:50.98:0,51,621	0/0:21,0:21:63.19:0,63,832	0/0:18,0:18:54.18:0,54,738	0/0:12,0:12:36.12:0,36,491	0/0:35,0:35:99:0,99,1310	0/0:29,0:29:78.25:0,78,1050	0/0:37,0:37:99:0,108,1458	0/0:29,0:29:75.25:0,75,1025	0/0:20,0:20:51.16:0,51,681	0/0:18,0:18:42.14:0,42,574	0/0:20,0:20:51.14:0,51,664	0/0:20,0:20:60.19:0,60,805	0/0:24,0:24:63.20:0,63,846	1/1:3,5:8:18.05:203,18,0	1/1:1,7:8:18.05:204,18,0	1/1:1,22:21:57.15:634,57,0	1/1:5,23:28:78.16:850,78,0	1/1:0,8:8:24.07:272,24,0	0/0:20,0:20:57.18:0,57,764	0/0:23,0:23:69.22:0,69,925	0/0:14,0:14:39.13:0,39,533	0/0:13,0:13:39.12:0,39,518	0/0:37,0:37:99:0,105,1420	0/0:23,0:23:66.22:0,66,903	0/0:14,0:14:36.11:0,36,476
chr10	23548904	.	G	GA	16860.19	PASS	AB=0.625;AC=51;AF=0.911;AN=56;BaseQRankSum=-7.341;DP=587;FS=56.521;HRun=6;HaplotypeScore=59.4633;InbreedingCoeff=0.7605;MQ=63.79;MQ0=0;MQRankSum=-4.298;QD=30.88;ReadPosRankSum=4.981;VQSLOD=0.7938;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,28:30:53.72:988,54,0	1/1:0,13:13:39.08:473,39,0	0/0:21,0:21:57.06:0,57,556	0/0:20,0:18:35.32:0,35,324	1/1:2,19:21:54.17:676,54,0	1/1:0,20:20:60.19:755,60,0	1/1:2,11:13:24.08:302,24,0	1/1:3,30:33:90.23:1078,90,0	1/1:3,26:29:69.22:868,69,0	1/1:2,32:34:96.31:1208,96,0	1/1:3,27:30:78.25:981,78,0	1/1:3,20:23:54.17:679,54,0	1/1:1,17:18:48.15:604,48,0	1/1:2,19:21:51.16:642,51,0	1/1:1,20:21:54.17:679,54,0	1/1:2,19:21:45.14:566,45,0	0/1:3,6:10:9.78:133,0,10	1/1:1,10:11:27.09:340,27,0	1/1:5,13:15:33.07:397,33,0	1/1:3,19:22:63.15:759,63,0	1/1:3,6:9:6.02:75,6,0	1/1:3,16:19:45.14:561,45,0	1/1:3,26:29:75.24:944,75,0	1/1:1,14:15:39.12:491,39,0	1/1:0,15:15:45.14:566,45,0	1/1:3,24:27:72.21:891,72,0	1/1:3,24:28:66.21:828,66,0	1/1:1,15:16:30.10:377,30,0
chr10	23550548	.	GA	G	958.50	PASS	AC=10;AF=0.185;AN=54;BaseQRankSum=2.157;DP=250;FS=0.752;HRun=9;HaplotypeScore=41.2943;InbreedingCoeff=0.8537;MQ=73.50;MQ0=1;MQRankSum=0.614;QD=20.84;ReadPosRankSum=1.770;VQSLOD=3.7861;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:27.08:0,27,311	0/0:5,0:5:15.04:0,15,173	0/0:16,0:13:20.37:0,20,206	0/0:12,0:8:17.41:0,17,173	0/0:20,0:20:54.10:0,54,598	0/0:6,0:6:17.89:0,18,188	0/0:4,0:4:9.03:0,9,104	0/0:22,0:22:60.18:0,60,692	0/0:3,0:3:5.98:0,6,55	0/0:9,0:9:24.07:0,24,277	0/0:17,0:17:48.05:0,48,515	0/0:4,0:4:12.04:0,12,138	0/0:9,0:9:27.08:0,27,309	0/0:4,0:4:11.99:0,12,122	0/0:4,0:4:9.03:0,9,104	0/0:5,0:5:15.04:0,15,173	1/1:0,13:13:39.02:357,39,0	1/1:0,7:7:21.01:192,21,0	1/1:4,7:11:18.01:165,18,0	1/1:0,12:12:36.02:329,36,0	1/1:0,3:3:9:82,9,0	0/0:3,0:3:9.03:0,9,104	0/0:6,0:6:15.04:0,15,173	0/0:1,0:1:3.01:0,3,35	0/0:17,0:17:48.14:0,48,554	0/0:2,0:17:46.94:0,47,249	0/0:1,0:9:17.20:0,17,97	./.
chr10	23550747	.	TA	T	8773.72	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-5.187;DP=438;FS=3.006;HRun=10;HaplotypeScore=76.1666;InbreedingCoeff=0.7275;MQ=72.73;MQ0=0;MQRankSum=-3.573;QD=21.09;ReadPosRankSum=4.034;VQSLOD=5.7810;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,19:22:44.99:391,45,0	1/1:1,2:3:6:52,6,0	0/0:17,0:14:20.16:0,20,187	0/0:4,0:5:3.02:0,3,31	1/1:0,18:18:44.27:389,44,0	1/1:1,20:21:47.99:417,48,0	1/1:1,9:10:23.99:208,24,0	1/1:4,21:25:62.94:543,63,0	1/1:0,8:8:15:130,15,0	1/1:3,20:23:59.94:512,60,0	1/1:3,15:18:41.98:364,42,0	1/1:1,12:13:35.99:313,36,0	1/1:0,17:17:47.99:417,48,0	1/1:2,6:8:1.26:137,1,0	1/1:1,12:13:35.99:313,36,0	1/1:2,15:17:38.92:339,39,0	1/1:0,21:21:59.99:521,60,0	1/1:1,8:9:23.99:208,24,0	1/1:6,25:31:71.92:615,72,0	1/1:0,23:23:62.99:547,63,0	1/1:3,11:14:29.99:260,30,0	1/1:1,9:10:26.99:234,27,0	1/1:0,11:11:23.88:208,24,0	1/1:0,4:4:12:104,12,0	1/1:1,12:14:32.03:266,32,0	1/1:1,22:23:65.99:573,66,0	1/1:1,31:32:68.99:598,69,0	1/1:1,7:8:14.68:115,15,0
chr10	23551234	.	ACAC	A	234.16	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-4.959;DP=593;FS=8.243;HRun=0;HaplotypeScore=192.9050;InbreedingCoeff=0.7989;MQ=57.61;MQ0=3;MQRankSum=-2.245;QD=14.63;ReadPosRankSum=-5.570;VQSLOD=1.1110;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:9,6:15:29.72:328,30,0	0/0:17,0:17:46.93:0,47,545	0/0:27,0:19:30.95:0,31,707	0/0:19,0:14:38.27:0,38,621	0/0:23,0:23:55.87:0,56,712	0/0:24,0:24:66.88:0,67,729	0/0:14,0:14:38.81:0,39,430	0/0:34,0:32:89.81:0,90,1229	0/0:18,0:18:39.68:0,40,488	0/0:29,0:29:85.30:0,85,787	0/0:23,0:23:65.49:0,65,815	0/0:27,0:27:49.38:0,49,640	0/0:26,0:26:65.46:0,65,673	0/0:23,0:23:61.21:0,61,616	0/0:28,0:28:75.51:0,76,716	0/0:29,0:29:77.22:0,77,696	0/0:19,0:19:36.10:0,36,612	0/0:7,0:7:6.74:0,7,132	0/0:17,0:14:4.75:0,5,528	0/0:22,0:22:56.22:0,56,978	0/0:18,0:17:23.06:0,23,378	0/0:23,0:23:65.63:0,66,732	0/0:22,0:22:58.36:0,58,623	0/0:11,0:11:26.74:0,27,338	0/0:25,0:25:65.54:0,66,775	0/0:24,0:24:65.78:0,66,1166	0/0:22,0:21:15.96:0,16,385	0/0:6,0:6:17.98:0,18,191
chr10	23551238	.	A	AC	867.38	PASS	AB=0.981;AC=8;AF=0.143;AN=56;BaseQRankSum=-6.018;DP=646;FS=18.199;HRun=1;HaplotypeScore=182.7209;InbreedingCoeff=0.6746;MQ=58.43;MQ0=3;MQRankSum=6.061;QD=8.18;ReadPosRankSum=-0.176;VQSLOD=-0.5478;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:23:25.75:0,26,193	0/0:19,0:19:47.57:0,48,410	0/1:24,0:17:23.50:23,0,241	0/0:20,0:14:29.63:0,30,329	0/0:24,0:24:54.75:0,55,464	0/0:24,0:24:64.19:0,64,589	0/0:14,0:14:32.86:0,33,275	0/0:32,0:30:60.13:0,60,695	0/0:23,0:23:47.71:0,48,415	0/0:34,0:34:75.02:0,75,713	0/0:24,0:24:65.68:0,66,537	0/0:29,0:29:60.12:0,60,548	0/0:28,0:28:62.94:0,63,587	0/0:24,0:24:60.02:0,60,564	0/0:30,0:30:74.92:0,75,663	0/0:29,0:29:75.55:0,76,714	0/1:22,0:22:4.37:4,0,154	0/0:11,0:11:6.62:0,7,61	0/0:21,0:17:28.97:0,29,255	0/0:25,0:25:49.06:0,49,469	0/0:23,0:22:12.08:0,12,158	0/0:22,0:22:53.92:0,54,468	0/0:23,0:23:62.96:0,63,570	0/0:11,0:11:26.95:0,27,241	0/0:26,0:26:62.84:0,63,531	1/1:5,20:25:34.76:602,35,0	1/1:11,20:30:23.87:298,24,0	1/1:1,2:3:6.02:82,6,0
chr10	23551243	.	AAAAAC	A	14356.40	PASS	AB=1.000;AC=35;AF=0.625;AN=56;BaseQRankSum=-6.632;DP=645;FS=16.519;HRun=0;HaplotypeScore=165.1112;InbreedingCoeff=0.8881;MQ=60.99;MQ0=3;MQRankSum=-5.566;QD=32.12;ReadPosRankSum=7.302;VQSLOD=3.0459;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:20:23.50:0,24,222	1/1:4,15:19:38.96:666,39,0	0/0:27,0:21:26.46:0,26,721	0/0:22,0:17:39.08:0,39,751	1/1:7,17:24:41.81:573,42,0	1/1:9,17:26:63.03:1086,63,0	1/1:4,10:14:24.04:398,24,0	1/1:6,26:30:69:1004,69,0	1/1:5,19:24:32.94:590,33,0	1/1:5,32:37:93.03:1527,93,0	1/1:3,20:23:39.04:637,39,0	1/1:7,23:30:56.91:967,57,0	1/1:2,25:27:54.07:950,54,0	1/1:2,23:25:48.12:873,48,0	1/1:3,27:30:63.17:1159,63,0	1/1:1,28:29:71.94:1330,72,0	0/0:24,0:24:7.40:0,7,443	0/0:10,0:10:12.03:0,12,143	0/0:20,0:17:45.02:0,45,544	0/0:19,0:19:47.86:0,48,615	0/1:25,0:24:23.50:23,0,252	1/1:2,20:22:47.95:726,48,0	1/1:7,15:22:54.09:921,54,0	1/1:5,7:12:14.76:284,15,0	1/1:3,23:26:36.08:644,36,0	0/0:22,0:22:54.51:0,55,579	0/0:30,0:29:22.67:0,23,400	0/0:3,0:3:6.02:0,6,80
chr10	23551244	.	AAAAC	A	8566.39	PASS	AB=0.992;AC=36;AF=0.643;AN=56;BaseQRankSum=0.373;DP=636;FS=15.181;HRun=0;HaplotypeScore=172.1695;InbreedingCoeff=0.6138;MQ=61.05;MQ0=3;MQRankSum=-6.171;QD=17.66;ReadPosRankSum=6.466;VQSLOD=3.3876;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:21,0:20:12.45:12,0,141	1/1:19,0:19:38.71:395,39,0	0/0:27,0:21:22.24:0,22,610	0/0:23,0:17:35.99:0,36,660	1/1:22,2:24:24.55:420,25,0	1/1:26,0:26:64.08:672,64,0	1/1:13,1:14:23.85:258,24,0	0/1:31,1:30:14.91:457,0,15	1/1:24,0:24:34.29:346,34,0	1/1:35,0:35:73.77:923,74,0	1/1:22,1:23:39.02:415,39,0	1/1:30,0:30:57.93:584,58,0	1/1:27,0:27:46.75:531,47,0	1/1:25,0:25:26.86:479,27,0	1/1:29,0:29:63.12:667,63,0	1/1:28,1:29:71.75:796,72,0	0/1:24,0:24:13.51:14,0,269	0/0:10,0:10:11.83:0,12,89	0/0:19,0:17:35.58:0,36,285	0/0:18,0:18:44.09:0,44,357	0/1:23,0:22:23.57:24,0,158	1/1:21,0:21:47.92:455,48,0	1/1:20,2:22:54.09:583,54,0	1/1:12,0:12:2.20:162,2,0	1/1:25,0:25:36.05:374,36,0	0/0:22,0:22:44.89:0,45,336	0/0:29,0:28:1.47:0,1,222	0/0:3,0:3:5.99:0,6,52
chr10	23551247	.	AC	A	6339	PASS	AB=1.000;AC=51;AF=0.911;AN=56;BaseQRankSum=1.954;DP=627;FS=9.334;HRun=1;HaplotypeScore=149.7192;InbreedingCoeff=0.6964;MQ=60.99;MQ0=3;MQRankSum=-4.025;QD=11.04;ReadPosRankSum=5.876;VQSLOD=2.5816;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:20,1:20:21.48:213,21,0	1/1:19,0:19:37.49:199,37,0	0/0:28,0:22:40.94:0,41,437	0/0:24,0:19:34.73:0,35,355	1/1:22,0:22:22.08:208,22,0	1/1:24,1:25:48.81:376,49,0	1/1:13,0:13:22.94:123,23,0	0/1:32,0:30:67.85:248,0,68	1/1:21,0:21:31.61:165,32,0	1/1:34,0:34:52.20:507,52,0	1/1:21,0:21:37.38:202,37,0	1/1:26,1:27:53.11:283,53,0	1/1:26,0:26:35.94:237,36,0	1/1:24,0:24:30.90:219,31,0	1/1:29,0:29:60.09:310,60,0	1/1:29,0:29:69.33:352,69,0	1/1:24,0:24:33.01:231,33,0	1/1:11,0:11:10.66:68,11,0	1/1:17,2:17:32.94:224,33,0	1/1:18,0:18:32.78:199,33,0	1/1:23,0:22:20.81:138,21,0	1/1:21,0:21:46.19:259,46,0	1/1:22,0:22:54.78:306,55,0	1/1:13,0:13:6.32:122,6,0	1/1:25,0:25:34.24:178,34,0	1/1:22,2:24:67.33:528,67,0	1/1:24,4:27:53.47:409,53,0	1/1:3,0:3:5.81:35,6,0
chr10	23551686	.	GGCCTCCAGTTAAGGCATGGTGCCAACCA	G	30385.57	PASS	AB=0.968;AC=35;AF=0.625;AN=56;BaseQRankSum=14.892;DP=485;FS=1.253;HRun=0;HaplotypeScore=370.4685;InbreedingCoeff=0.8762;MQ=88.92;MQ0=0;MQRankSum=-14.342;QD=110.90;ReadPosRankSum=7.398;VQSLOD=3.3220;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,108,12366	1/1:2,4:6:12.04:902,12,0	0/0:29,0:29:84.29:0,84,5172	0/0:26,0:25:59.28:0,59,3958	1/1:2,17:19:48.12:2951,48,0	1/1:8,7:15:18.06:1355,18,0	1/1:2,9:11:21.07:1581,21,0	1/1:21,0:21:9.01:135,9,0	1/1:2,13:15:36.12:2710,36,0	1/1:6,11:17:30.09:1922,30,0	1/1:4,11:15:33.11:2448,33,0	1/1:8,4:12:6.49:452,6,0	1/1:5,13:18:36.12:2709,36,0	1/1:4,12:16:33.11:2484,33,0	1/1:2,11:13:27.09:2032,27,0	1/1:5,12:17:36.12:2710,36,0	0/0:15,0:15:42.14:0,42,4951	0/0:11,0:11:30.10:0,30,3153	0/0:15,0:15:45.15:0,45,4672	0/0:19,0:19:54.19:0,54,6709	0/0:29,0:29:84.29:0,84,9225	1/1:4,10:14:27.09:2021,27,0	1/1:5,11:16:33.11:2484,33,0	1/1:7,4:11:6.49:452,6,0	1/1:1,7:8:12.04:903,12,0	0/1:29,1:30:99:136,0,9170	0/0:24,0:24:72.25:0,72,8285	0/0:7,0:7:18.06:0,18,2300
chr10	23552919	.	GAT	G	7240.21	PASS	AB=0.930;AC=37;AF=0.661;AN=56;BaseQRankSum=3.594;DP=398;FS=11.138;HRun=0;HaplotypeScore=60.0982;InbreedingCoeff=0.6859;MQ=75.03;MQ0=2;MQRankSum=2.925;QD=24.30;ReadPosRankSum=0.876;VQSLOD=4.6199;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:2,0:7:6:0,6,53	1/1:0,8:8:20.96:256,21,0	0/0:11,0:10:8.61:0,9,50	0/1:14,0:9:7.97:47,0,8	1/1:5,24:29:72.06:855,72,0	1/1:3,10:13:30.09:367,30,0	1/1:5,3:8:9.03:110,9,0	1/1:8,25:33:75.20:881,75,0	1/1:4,15:19:36.11:440,36,0	1/1:0,21:21:63.16:743,63,0	1/1:5,17:23:50.99:598,51,0	1/1:1,11:11:27.08:330,27,0	1/1:4,12:16:36.11:440,36,0	1/1:2,17:19:48.15:586,48,0	1/1:7,7:14:21.06:257,21,0	1/1:4,6:10:18.06:220,18,0	0/0:8,0:12:5.83:0,6,52	0/0:2,0:7:14.96:0,15,126	0/0:17,0:24:44.75:0,45,430	0/0:9,0:9:3:0,3,29	0/1:2,0:2:0:0,0,0	1/1:1,1:2:3.01:37,3,0	1/1:4,9:14:23.91:271,24,0	1/1:1,2:3:6.02:73,6,0	1/1:2,20:21:51.16:623,51,0	0/1:11,4:15:99:107,0,399	0/0:24,1:25:29.57:0,30,975	0/0:5,0:5:9.03:0,9,146
chr10	23553229	.	G	GA	22271.28	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-14.415;DP=744;FS=2.104;HRun=3;HaplotypeScore=59.3018;InbreedingCoeff=0.9917;MQ=96.65;MQ0=0;MQRankSum=-8.276;QD=36.75;ReadPosRankSum=5.223;VQSLOD=5.1230;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,53:55:99:1974,141,0	1/1:1,7:8:21:270,21,0	0/0:41,0:41:99:0,111,1245	0/0:29,0:29:72.18:0,72,818	1/1:2,30:32:87.29:1218,87,0	1/1:0,25:25:72.21:987,72,0	1/1:0,19:19:51.17:714,51,0	1/1:3,28:31:81.23:1084,81,0	1/1:0,25:25:66.22:924,66,0	1/1:1,39:40:99:1604,117,0	1/1:0,24:24:66.22:924,66,0	1/1:1,20:21:54.18:756,54,0	1/1:0,23:23:63.21:882,63,0	1/1:1,32:33:84.28:1176,84,0	1/1:1,38:39:99:1429,102,0	1/1:1,34:35:99:1387,99,0	1/1:2,32:34:84.28:1176,84,0	1/1:0,12:12:30.10:420,30,0	1/1:2,22:24:66.21:905,66,0	1/1:0,15:15:45.15:630,45,0	1/1:2,35:37:84.28:1176,84,0	1/1:0,14:14:42.14:588,42,0	1/1:3,13:16:39.13:546,39,0	1/1:1,23:24:63.21:870,63,0	1/1:2,18:20:45.15:630,45,0	0/0:25,0:25:69.20:0,69,820	0/0:39,0:39:99:0,102,1186	0/0:4,0:4:12.04:0,12,144
chr10	23553917	.	TCTC	T	565.52	PASS	AB=0.619;AC=11;AF=0.196;AN=56;BaseQRankSum=4.330;DP=511;FS=0.831;HRun=0;HaplotypeScore=93.5846;InbreedingCoeff=0.4704;MQ=60.68;MQ0=26;MQRankSum=-3.323;QD=5.83;ReadPosRankSum=-0.808;VQSLOD=2.4947;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:13.86:0,14,155	0/0:9,0:9:15.14:0,15,161	0/0:27,0:16:44.12:0,44,571	0/0:38,0:20:39.10:0,39,618	0/0:23,0:21:42.14:0,42,549	0/0:24,0:23:42.61:0,43,594	0/0:22,0:21:27.93:0,28,419	0/0:31,0:30:84.63:0,85,1230	0/0:15,0:14:19.31:0,19,306	0/0:19,0:19:49.03:0,49,749	0/0:22,0:20:21.07:0,21,297	0/0:11,0:11:18.06:0,18,260	0/0:19,0:18:28.35:0,28,410	0/0:22,0:22:18.53:0,19,303	0/0:15,0:14:24.54:0,25,358	0/0:16,0:16:18.06:0,18,267	1/1:7,0:9:10.54:104,11,0	0/1:1,0:5:53.84:71,0,54	0/1:10,0:13:69.46:124,0,69	1/1:27,0:24:0.03:49,0,0	0/0:12,0:10:3.01:0,3,52	0/0:24,0:23:42.14:0,42,548	0/0:19,0:18:42.13:0,42,536	0/0:14,0:14:24.08:0,24,316	0/0:18,0:18:30.57:0,31,442	0/1:1,6:8:54.14:177,0,54	1/1:1,12:13:8.99:132,9,0	1/1:3,7:7:3.01:56,3,0
chr10	23553984	.	T	TCACACA	1945.11	PASS	AB=0.866;AC=42;AF=0.875;AN=48;BaseQRankSum=-1.758;DP=385;FS=0.000;HRun=0;HaplotypeScore=115.9844;InbreedingCoeff=0.2306;MQ=45.47;MQ0=11;MQRankSum=1.270;QD=6.27;ReadPosRankSum=1.661;VQSLOD=2.1688;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:5,0:7:2.79:16,3,0	1/1:3,0:4:3.01:44,3,0	./.	./.	0/1:10,2:11:0:0,0,0	1/1:15,0:16:6.02:178,6,0	1/1:22,0:24:0.47:1,0,0	1/1:25,0:25:4.99:25,5,0	1/1:15,0:14:9.03:198,9,0	1/1:10,0:10:10.59:223,11,0	0/1:10,2:12:0:0,0,0	1/1:9,0:11:6.02:150,6,0	1/1:11,0:11:9.03:204,9,0	1/1:18,0:17:6.02:158,6,0	1/1:14,1:19:2.73:23,3,0	1/1:10,0:12:6.02:158,6,0	1/1:13,0:12:3.25:31,3,0	0/0:1,0:1:0:0,0,0	0/1:12,0:12:0.53:1,0,1	1/1:18,0:18:7.59:87,8,0	1/1:11,0:8:1.96:36,2,0	1/1:10,0:10:15.05:318,15,0	1/1:7,0:6:3.01:61,3,0	./.	0/1:10,0:15:0:1,0,0	1/1:11,0:11:6.45:47,6,0	1/1:12,0:12:6:61,6,0	./.
chr10	23554134	.	GA	G	16706.11	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-3.571;DP=579;FS=0.641;HRun=4;HaplotypeScore=61.2748;InbreedingCoeff=0.9874;MQ=85.43;MQ0=0;MQRankSum=-10.005;QD=30.99;ReadPosRankSum=6.243;VQSLOD=4.6815;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,36:37:96.29:1151,96,0	1/1:0,5:5:15.05:180,15,0	0/0:20,0:20:51.16:0,51,684	0/0:20,0:20:56.83:0,57,718	1/1:3,18:21:51.16:612,51,0	1/1:2,25:27:63.19:755,63,0	1/1:1,19:19:48.15:576,48,0	1/1:2,21:23:63.09:709,63,0	1/1:0,19:18:54.17:647,54,0	1/1:1,19:20:57.17:673,57,0	1/1:2,19:21:54.17:648,54,0	1/1:1,12:13:30.09:360,30,0	1/1:1,16:17:45.14:540,45,0	1/1:0,19:18:51.10:594,51,0	1/1:1,21:22:57.17:683,57,0	1/1:0,17:17:39.12:467,39,0	1/1:1,27:28:69.21:827,69,0	1/1:1,6:7:18.05:216,18,0	1/1:1,22:23:66.14:753,66,0	1/1:0,25:25:66.20:791,66,0	1/1:0,21:21:51.16:610,51,0	1/1:2,28:30:81.25:972,81,0	1/1:1,23:24:62.85:754,63,0	1/1:1,19:20:42.13:503,42,0	1/1:0,20:20:57.17:683,57,0	1/1:1,25:26:72.21:851,72,0	1/1:0,23:23:63.18:755,63,0	1/1:0,11:11:33.10:396,33,0
chr10	23555001	.	AACAC	A	1644.06	PASS	AB=0.903;AC=34;AF=0.708;AN=48;BaseQRankSum=5.887;DP=447;FS=3.758;HRun=0;HaplotypeScore=124.5578;InbreedingCoeff=0.2738;MQ=62.44;MQ0=18;MQRankSum=-3.761;QD=5.87;ReadPosRankSum=2.017;VQSLOD=2.4946;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:21:3.07:0,3,11	1/1:8,0:8:17.31:128,17,0	./.	./.	1/1:17,0:17:12.86:79,13,0	1/1:10,0:8:8.23:63,8,0	0/1:11,0:11:7.45:14,0,7	./.	1/1:8,0:7:10.95:78,11,0	0/1:29,0:26:15.41:98,0,15	1/1:10,0:9:7.18:46,7,0	0/1:8,0:7:0.25:28,0,0	1/1:17,0:17:20.39:156,20,0	1/1:11,0:11:11.74:65,12,0	1/1:14,0:14:17.69:141,18,0	1/1:16,0:16:9.69:74,10,0	1/1:12,5:16:6.02:80,6,0	1/1:12,0:11:3.01:39,3,0	1/1:8,1:8:3.01:46,3,0	0/1:11,8:19:16.47:188,0,16	0/1:12,8:18:13.93:84,0,14	0/1:16,0:16:18.69:67,0,19	1/1:13,0:13:14.32:158,14,0	./.	1/1:14,0:14:19.04:165,19,0	0/0:19,0:18:21.06:0,21,336	0/0:23,0:23:8.89:0,9,542	0/0:10,0:10:11.44:0,11,138
chr10	23555006	.	ACACAC	A	1286.33	PASS	AB=0.846;AC=16;AF=0.286;AN=56;BaseQRankSum=10.953;DP=457;FS=17.552;HRun=0;HaplotypeScore=135.2707;InbreedingCoeff=-0.1966;MQ=55.37;MQ0=19;MQRankSum=-7.595;QD=6.07;ReadPosRankSum=3.595;VQSLOD=0.8279;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:36.64:0,37,388	1/1:3,4:7:5.92:187,6,0	0/0:21,0:9:22.31:0,22,270	0/0:26,0:12:35.76:0,36,405	0/1:13,3:17:90.10:90,0,116	0/1:8,3:9:66.29:66,0,73	0/1:11,0:11:26.50:26,0,50	0/0:21,0:20:53.81:0,54,274	0/1:4,3:6:1.04:96,0,1	0/1:26,1:26:60.92:61,0,255	0/1:10,0:9:38.11:38,0,51	0/1:6,2:7:38.71:39,0,44	0/1:15,4:19:99:159,0,131	0/1:7,2:10:28.78:102,0,29	0/1:9,5:15:60.84:165,0,61	0/1:14,2:16:85.73:107,0,86	0/0:18,0:17:33.06:0,33,368	0/0:13,0:12:29.58:0,30,346	0/0:8,0:7:12.05:0,12,121	0/0:16,0:16:29.19:0,29,352	0/0:22,0:19:31.87:0,32,426	0/1:14,2:16:76.03:76,0,93	0/1:14,3:16:98.03:135,0,98	0/0:19,1:20:25.85:0,26,140	0/1:17,1:19:99:100,0,151	0/0:20,0:19:56.85:0,57,1053	0/0:23,0:22:63.18:0,63,1299	0/0:14,0:14:42.14:0,42,813
chr10	23555062	.	AG	A	7067.81	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=10.570;DP=447;FS=0.434;HRun=6;HaplotypeScore=93.8841;InbreedingCoeff=0.9556;MQ=72.98;MQ0=8;MQRankSum=-1.824;QD=27.50;ReadPosRankSum=2.131;VQSLOD=5.0496;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:33.09:0,33,410	1/1:0,10:10:27.07:289,27,0	0/0:23,1:21:54.14:0,54,690	0/0:25,0:17:36.05:0,36,442	1/1:0,20:20:57.14:605,57,0	1/1:0,13:13:39.10:417,39,0	1/1:2,11:13:30.07:322,30,0	1/1:4,33:36:96.24:1030,96,0	1/1:2,3:5:9.02:97,9,0	1/1:1,10:11:30.08:322,30,0	1/1:0,13:13:36.09:387,36,0	1/1:2,10:12:30.07:322,30,0	1/1:2,14:16:42.11:450,42,0	1/1:2,13:15:36.08:381,36,0	1/1:3,11:14:30.07:322,30,0	1/1:2,13:14:39.10:419,39,0	0/0:18,0:18:42.14:0,42,547	0/0:6,0:6:18.06:0,18,236	0/0:11,0:11:30.10:0,30,389	0/0:14,0:14:36.12:0,36,464	0/0:24,0:24:57.16:0,57,721	1/1:2,16:18:48.12:514,48,0	1/1:3,9:12:30.07:322,30,0	1/1:0,12:12:27.07:290,27,0	1/1:3,18:20:54.13:578,54,0	0/0:12,1:13:0.84:0,1,348	0/0:22,0:22:53.53:0,54,664	0/0:15,0:15:42.14:0,42,553
chr10	23555308	.	TA	T	2066.17	PASS	AB=0.533;AC=15;AF=0.288;AN=52;BaseQRankSum=5.756;DP=170;FS=6.092;HRun=1;HaplotypeScore=35.4657;InbreedingCoeff=0.8107;MQ=97.26;MQ0=0;MQRankSum=-3.185;QD=35.02;ReadPosRankSum=-1.406;VQSLOD=2.4924;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:2,0:2:6.02:0,6,92	./.	0/0:9,0:9:27.09:0,27,407	0/0:9,0:9:19.58:0,20,291	0/0:5,0:5:15.05:0,15,226	0/0:4,0:4:12.04:0,12,184	0/0:9,0:9:24.06:0,24,345	0/0:17,0:17:51.16:0,51,761	0/0:3,0:3:9.03:0,9,138	0/0:4,0:4:12.04:0,12,184	0/0:8,0:8:24.08:0,24,365	0/0:4,0:4:12.04:0,12,182	0/0:5,0:5:15.05:0,15,228	0/0:5,0:5:15.05:0,15,230	0/0:6,0:6:18.06:0,18,276	0/0:2,0:2:6.02:0,6,92	1/1:0,7:7:21.07:293,21,0	1/1:0,7:7:21.07:293,21,0	1/1:0,9:9:27.06:356,27,0	1/1:0,10:10:30.02:376,30,0	1/1:0,5:5:12.04:167,12,0	0/0:4,0:4:12.04:0,12,181	0/0:9,0:9:27.09:0,27,412	./.	0/0:6,0:6:18.06:0,18,275	0/1:1,7:8:21.87:268,0,22	1/1:0,10:10:27.09:375,27,0	1/1:0,3:3:9.03:126,9,0
chr10	23555430	.	TCTCTCTC	T	545.98	PASS	AC=16;AF=0.727;AN=22;BaseQRankSum=2.296;DP=65;FS=9.688;HRun=0;HaplotypeScore=70.1295;InbreedingCoeff=0.5228;MQ=124.11;MQ0=4;MQRankSum=-2.766;QD=36.40;ReadPosRankSum=-0.741;VQSLOD=2.2923;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:2,0:1:3.01:0,3,114	1/1:0,1:1:3.01:52,3,0	0/0:23,0:13:21.23:0,21,400	0/0:23,0:13:24.74:0,25,371	1/1:0,3:3:9.03:147,9,0	1/1:0,2:2:6.02:106,6,0	./.	./.	1/1:1,2:3:6.02:110,6,0	./.	./.	./.	1/1:0,1:1:3.01:49,3,0	./.	1/1:0,2:2:3.01:52,3,0	1/1:0,2:2:6.02:105,6,0	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	1/1:1,0:1:3:29,3,0
chr10	23556891	.	G	GA	13836.34	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-15.853;DP=601;FS=2.191;HRun=1;HaplotypeScore=51.9835;InbreedingCoeff=0.9974;MQ=70.53;MQ0=0;MQRankSum=-0.442;QD=40.11;ReadPosRankSum=0.282;VQSLOD=5.2209;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:58:99:0,168,2115	1/1:0,11:11:27.04:378,27,0	0/0:20,0:16:48.13:0,48,596	0/0:20,0:16:45.10:0,45,539	1/1:3,30:33:84.15:1176,84,0	1/1:0,13:13:36.12:539,36,0	1/1:1,18:19:51.17:764,51,0	1/1:1,20:21:57.15:807,57,0	1/1:1,23:24:66.22:989,66,0	1/1:0,20:20:60.20:899,60,0	1/1:1,26:27:78.11:1091,78,0	1/1:0,19:19:57.19:854,57,0	1/1:0,20:20:57.19:852,57,0	1/1:0,15:15:39.13:584,39,0	1/1:0,16:15:42.14:629,42,0	1/1:0,23:23:66.22:986,66,0	0/0:27,0:27:81.26:0,81,1051	0/0:16,0:16:36.09:0,36,450	0/0:13,0:10:30.06:0,30,345	0/0:21,0:21:63.19:0,63,802	0/0:35,0:35:96.29:0,96,1229	1/1:2,21:23:62.42:906,62,0	1/1:0,16:16:42.14:629,42,0	1/1:0,18:18:39.13:584,39,0	1/1:0,27:27:78.26:1169,78,0	0/0:23,0:23:69.22:0,69,883	0/0:18,0:18:54.18:0,54,700	0/0:5,0:5:15.05:0,15,195
chr10	23557282	.	GC	G	10354.94	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=17.888;DP=606;FS=6.395;HRun=4;HaplotypeScore=92.0430;InbreedingCoeff=0.9588;MQ=75.48;MQ0=0;MQRankSum=-1.847;QD=30.82;ReadPosRankSum=2.074;VQSLOD=5.1128;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,147,2002	1/1:0,4:4:9.03:108,9,0	0/0:17,0:17:48.13:0,48,626	0/0:28,0:28:63.89:0,64,759	1/1:0,17:17:45.14:540,45,0	1/1:2,24:26:72.22:864,72,0	1/1:0,22:22:60.18:720,60,0	1/1:5,18:23:54.16:647,54,0	1/1:1,23:24:57.17:684,57,0	1/1:3,19:22:60.17:709,60,0	1/1:0,15:15:42.13:504,42,0	1/1:0,24:24:66.20:792,66,0	1/1:0,16:16:45.14:540,45,0	1/1:3,18:21:39.12:468,39,0	1/1:1,21:22:57.17:684,57,0	1/1:2,14:16:42.13:504,42,0	0/0:35,0:35:99:0,99,1382	0/0:24,0:24:69.21:0,69,944	0/0:27,0:27:78.26:0,78,1091	0/0:14,0:14:42.14:0,42,588	0/0:37,0:37:99:0,105,1450	1/1:0,17:17:48.15:576,48,0	1/1:0,12:12:30.09:360,30,0	1/1:4,33:37:87.27:1044,87,0	1/1:1,17:18:51.16:612,51,0	0/0:24,2:26:3.23:0,3,893	0/0:10,0:10:30.10:0,30,420	0/0:3,0:3:9.03:0,9,126
chr10	23557778	.	GA	G	14337.70	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-0.012;DP=564;FS=1.613;HRun=7;HaplotypeScore=74.4100;InbreedingCoeff=0.9903;MQ=73.40;MQ0=0;MQRankSum=-7.986;QD=27.00;ReadPosRankSum=4.606;VQSLOD=5.4369;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,21:22:60.14:612,60,0	1/1:0,8:8:21.04:214,21,0	0/0:23,0:23:54.15:0,54,651	0/0:10,0:9:21.03:0,21,245	1/1:0,27:27:78.18:795,78,0	1/1:1,27:28:75.17:765,75,0	1/1:0,25:25:72.16:735,72,0	1/1:3,20:23:60.13:612,60,0	1/1:1,18:19:48.11:490,48,0	1/1:3,26:29:81.17:821,81,0	1/1:0,23:23:63.14:643,63,0	1/1:0,18:18:54.12:551,54,0	1/1:3,23:26:66.15:673,66,0	1/1:1,15:16:42.09:429,42,0	1/1:1,17:18:45.10:459,45,0	1/1:3,15:18:45.10:459,45,0	1/1:5,17:22:55.71:588,56,0	1/1:1,6:7:18:173,18,0	1/1:2,16:17:45.10:459,45,0	1/1:3,24:27:72.16:734,72,0	1/1:2,17:19:39.08:398,39,0	1/1:3,13:16:36.08:367,36,0	1/1:0,23:23:54.12:551,54,0	1/1:0,12:12:36.08:367,36,0	1/1:1,13:14:39.09:398,39,0	1/1:2,21:23:63.14:638,63,0	1/1:7,35:42:99:1162,114,0	1/1:2,6:8:24.05:244,24,0
chr10	23557828	.	TA	T	5622.99	PASS	AB=0.521;AC=15;AF=0.268;AN=56;BaseQRankSum=6.336;DP=555;FS=2.556;HRun=1;HaplotypeScore=83.7842;InbreedingCoeff=0.9087;MQ=67.51;MQ0=0;MQRankSum=-8.449;QD=36.51;ReadPosRankSum=2.278;VQSLOD=5.2737;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:69.24:0,69,1101	0/0:8,0:8:24.08:0,24,382	0/0:16,0:16:45.14:0,45,677	0/0:29,0:28:83.79:0,84,1203	0/0:25,0:25:75.26:0,75,1198	0/0:26,0:26:75.21:0,75,1125	0/0:24,0:24:69.22:0,69,1076	0/0:22,0:22:66.20:0,66,992	0/0:15,0:15:42.14:0,42,671	0/0:22,0:22:66.22:0,66,1035	0/0:25,0:25:75.26:0,75,1198	0/0:17,0:17:51.16:0,51,792	0/0:17,0:17:51.17:0,51,815	0/0:15,0:15:45.15:0,45,719	0/0:27,0:27:75.26:0,75,1196	0/0:22,0:22:66.23:0,66,1055	1/1:1,16:17:48.10:630,48,0	1/1:0,10:10:30.06:397,30,0	1/1:0,12:12:33.09:438,33,0	1/1:1,26:27:69.23:962,69,0	1/1:1,20:21:54.17:738,54,0	0/0:11,0:11:33.10:0,33,502	0/0:23,0:23:69.24:0,69,1095	0/0:20,0:20:60.20:0,60,959	0/0:13,0:13:39.13:0,39,623	0/1:2,23:25:22.70:850,0,23	1/1:3,29:32:92.89:1230,93,0	1/1:0,10:10:27.09:377,27,0
chr10	23558190	.	GA	G	3068.04	PASS	AB=0.909;AC=17;AF=0.304;AN=56;BaseQRankSum=11.617;DP=548;FS=0.378;HRun=10;HaplotypeScore=53.0786;InbreedingCoeff=0.8949;MQ=61.97;MQ0=2;MQRankSum=0.284;QD=18.05;ReadPosRankSum=1.212;VQSLOD=4.2560;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:57.14:0,57,622	0/0:8,0:8:24.06:0,24,266	0/0:12,0:7:8.97:0,9,72	0/0:7,1:6:9.02:0,9,100	0/0:31,1:33:78.03:0,78,834	0/0:24,0:24:66.18:0,66,730	0/0:11,0:11:26.56:0,27,274	0/0:32,0:30:54.06:0,54,562	0/0:19,0:20:53.95:0,54,560	0/0:29,0:29:69.18:0,69,755	0/0:27,0:27:72.15:0,72,782	0/1:9,1:10:2:2,0,202	0/0:19,0:19:48.09:0,48,518	0/0:17,0:17:42.11:0,42,464	0/0:26,0:26:75.19:0,75,819	0/0:20,0:19:19.16:0,19,431	1/1:1,17:18:44.99:391,45,0	1/1:3,17:20:19.12:385,19,0	1/1:4,19:21:53.92:461,54,0	1/1:8,24:32:35.78:539,36,0	1/1:0,16:16:47.99:417,48,0	0/0:16,0:16:42.11:0,42,464	0/0:17,0:17:39.11:0,39,431	0/0:13,0:14:35.93:0,36,379	0/0:22,0:22:57.15:0,57,624	1/1:2,21:23:2.64:474,3,0	1/1:1,18:19:41.99:365,42,0	1/1:0,9:9:26.99:234,27,0
chr10	23573105	.	T	TG	3489.76	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=5.516;DP=420;FS=12.193;HRun=7;HaplotypeScore=67.1817;InbreedingCoeff=0.9617;MQ=76.83;MQ0=0;MQRankSum=-1.302;QD=24.23;ReadPosRankSum=1.792;VQSLOD=3.3405;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:47.59:0,48,486	0/0:6,0:6:3:0,3,29	0/0:20,0:18:24.73:0,25,215	0/0:19,0:18:15.91:0,16,245	0/0:21,0:21:51.08:0,51,492	0/0:10,0:10:24.04:0,24,231	0/0:17,0:17:42.06:0,42,405	0/0:19,0:19:36.04:0,36,347	0/0:13,0:13:36.06:0,36,346	0/0:18,0:18:45.07:0,45,434	0/0:10,0:10:23.95:0,24,212	0/0:7,0:7:15.02:0,15,145	0/0:15,0:15:45.04:0,45,418	0/0:10,0:10:30.03:0,30,283	0/0:19,0:19:54.06:0,54,507	0/0:7,0:7:21.01:0,21,196	1/1:2,22:24:54.17:652,54,0	1/1:1,12:13:30.09:362,30,0	1/1:3,10:13:30.09:361,30,0	1/1:2,9:11:21.06:249,21,0	1/1:8,25:33:51.16:616,51,0	0/0:10,0:10:30.05:0,30,289	0/0:11,0:11:30.04:0,30,289	0/0:7,0:7:21.03:0,21,202	0/0:13,0:13:33.03:0,33,312	1/1:5,16:21:22.16:525,22,0	1/1:4,13:17:39.12:470,39,0	1/1:2,10:12:21.06:254,21,0
chr10	23574767	.	CA	C	6265.68	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=14.468;DP=553;FS=8.017;HRun=2;HaplotypeScore=57.4828;InbreedingCoeff=0.9988;MQ=72.85;MQ0=0;MQRankSum=-1.132;QD=37.08;ReadPosRankSum=1.505;VQSLOD=5.2665;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:66.17:0,66,956	0/0:11,0:11:33.11:0,33,495	0/0:9,0:9:27.09:0,27,391	0/0:13,0:13:27.09:0,27,403	0/0:32,0:32:90.30:0,90,1337	0/0:23,0:23:69.23:0,69,1032	0/0:19,0:19:54.18:0,54,809	0/0:18,0:18:51.17:0,51,765	0/0:15,0:15:45.15:0,45,675	0/0:23,0:23:66.22:0,66,989	0/0:25,0:25:72.24:0,72,1076	0/0:16,0:16:48.16:0,48,719	0/0:22,0:22:66.22:0,66,986	0/0:10,0:10:30.10:0,30,448	0/0:18,0:18:54.18:0,54,808	0/0:20,0:20:60.20:0,60,896	1/1:0,28:28:78.25:1013,78,0	1/1:1,16:17:48.16:623,48,0	1/1:0,12:12:36.10:453,36,0	1/1:0,23:23:66.21:856,66,0	1/1:0,13:13:36.12:467,36,0	0/0:28,0:28:84.28:0,84,1252	0/0:22,0:22:66.22:0,66,986	0/0:11,0:11:33.11:0,33,492	0/0:25,0:25:75.25:0,75,1124	1/1:1,31:32:72.42:1178,72,0	1/1:1,36:37:99:1402,108,0	1/1:0,7:7:21.07:273,21,0
chr10	23575007	.	GAC	G	21955.78	PASS	AB=0.621;AC=50;AF=0.893;AN=56;BaseQRankSum=-1.474;DP=979;FS=20.669;HRun=0;HaplotypeScore=144.3384;InbreedingCoeff=0.7177;MQ=56.70;MQ0=28;MQRankSum=7.915;QD=25.44;ReadPosRankSum=3.865;VQSLOD=4.1270;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,40:49:66.16:821,66,0	1/1:4,12:16:16.26:351,16,0	0/0:52,0:13:26.88:0,27,381	0/0:63,0:18:17.45:0,17,263	1/1:5,34:38:90.28:1124,90,0	1/1:2,14:16:30.10:382,30,0	1/1:4,25:28:42.12:535,42,0	1/1:14,25:37:25.10:765,25,0	1/1:7,33:41:66.21:840,66,0	1/1:5,42:47:99:1588,126,0	1/1:5,21:26:54.08:686,54,0	1/1:1,26:27:57.18:725,57,0	1/1:17,19:36:90.29:1144,90,0	1/1:4,43:47:93.30:1183,93,0	1/1:7,42:48:93.30:1184,93,0	1/1:11,13:25:61.06:747,61,0	1/1:7,32:39:68.21:850,68,0	1/1:7,17:23:45.51:733,46,0	0/1:10,14:22:2.53:458,0,3	1/1:6,15:20:51.16:642,51,0	1/1:11,73:83:99:2061,162,0	1/1:8,15:23:66.17:806,66,0	1/1:1,22:23:42.13:532,42,0	1/1:19,24:41:99:1315,105,0	1/1:6,9:15:33.09:407,33,0	1/1:2,25:27:75.23:939,75,0	1/1:9,32:42:69.22:878,69,0	0/1:4,7:11:3.07:261,0,3
chr10	23575102	.	A	AAC	14087.55	PASS	AB=0.725;AC=33;AF=0.589;AN=56;BaseQRankSum=-6.272;DP=868;FS=4.741;HRun=0;HaplotypeScore=137.8784;InbreedingCoeff=-0.3848;MQ=56.02;MQ0=20;MQRankSum=0.526;QD=18.11;ReadPosRankSum=0.951;VQSLOD=5.1031;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:43:26.86:0,27,195	1/1:4,3:6:12.04:177,12,0	0/0:46,0:9:3.01:0,3,34	0/1:66,0:16:0:0,0,0	0/1:17,7:25:18:506,0,18	0/1:19,2:21:73.72:268,0,74	0/1:25,2:28:99:559,0,127	0/1:20,10:29:79.52:391,0,80	0/1:17,11:27:56.11:512,0,56	1/1:25,9:34:53.38:749,53,0	0/1:7,16:26:20.77:474,0,21	0/1:22,5:28:83.26:520,0,83	0/1:4,26:31:11.23:739,0,11	0/1:24,15:39:99:877,0,125	1/1:25,11:35:10.97:891,11,0	0/1:10,16:27:79.21:383,0,79	1/1:15,15:30:34.56:937,35,0	0/1:8,17:25:30.54:451,0,31	0/1:9,4:11:29.48:274,0,29	0/1:6,19:26:50.34:593,0,50	1/1:46,19:63:44.85:1163,45,0	0/1:17,24:41:66.46:581,0,66	0/1:9,5:13:13.63:247,0,14	0/1:13,33:48:66.63:854,0,67	1/1:6,7:14:24.08:362,24,0	0/1:19,9:29:73.51:534,0,74	0/1:19,9:28:18.66:637,0,19	1/1:3,9:13:15.96:408,16,0
chr10	23578175	.	GA	G	926.36	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.683;DP=714;FS=0.718;HRun=3;HaplotypeScore=66.7810;InbreedingCoeff=0.9920;MQ=92.57;MQ0=0;MQRankSum=-3.789;QD=26.47;ReadPosRankSum=0.688;VQSLOD=2.7092;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,35:35:84.20:1021,84,0	0/0:7,0:7:21.05:0,21,283	0/0:32,0:32:90.25:0,90,1247	0/0:27,0:28:78.01:0,78,977	0/0:38,0:38:99:0,105,1471	0/0:21,0:21:60.20:0,60,864	0/0:20,0:20:57.12:0,57,777	0/0:39,0:39:99:0,114,1566	0/0:21,0:21:63.20:0,63,889	0/0:30,0:30:87.29:0,87,1238	0/0:34,0:34:99:0,102,1432	0/0:23,0:23:69.23:0,69,993	0/0:29,0:29:81.26:0,81,1150	0/0:33,0:33:93.30:0,93,1313	0/0:37,0:37:99:0,111,1562	0/0:18,0:18:54.17:0,54,758	0/0:15,0:15:42.10:0,42,565	0/0:19,0:19:57.10:0,57,757	0/0:26,0:26:75.24:0,75,1063	0/0:22,0:22:66.22:0,66,944	0/0:38,0:38:99:0,114,1640	0/0:23,0:23:63.21:0,63,907	0/0:19,0:19:57.19:0,57,819	0/0:22,0:22:66.20:0,66,931	0/0:16,0:16:48.15:0,48,673	0/0:33,0:33:96.32:0,96,1382	0/0:29,0:27:87.28:0,87,1236	0/0:7,0:7:21.07:0,21,302
chr10	23579109	.	A	AATTC	17330.67	PASS	AB=0.559;AC=33;AF=0.589;AN=56;BaseQRankSum=-13.736;DP=637;FS=21.347;HRun=0;HaplotypeScore=87.3878;InbreedingCoeff=0.9225;MQ=66.38;MQ0=1;MQRankSum=0.501;QD=42.17;ReadPosRankSum=1.064;VQSLOD=3.5124;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:45.13:0,45,701	1/1:6,8:14:27.09:650,27,0	0/0:24,0:21:12.04:0,12,195	0/0:23,0:22:33.11:0,33,530	1/1:17,23:41:69.20:1502,69,0	1/1:9,20:28:57.20:1384,57,0	1/1:5,5:10:15.05:364,15,0	1/1:18,11:30:39.13:845,39,0	1/1:6,15:22:39.13:913,39,0	1/1:8,9:17:36.10:777,36,0	0/1:4,15:19:3.71:886,0,4	1/1:6,16:24:51.18:1224,51,0	1/1:9,15:27:54.18:1274,54,0	1/1:7,13:20:33.11:801,33,0	1/1:11,14:25:36.12:874,36,0	1/1:10,16:26:48.16:1152,48,0	0/0:25,0:25:57.19:0,57,927	0/0:11,0:11:21.07:0,21,338	0/0:17,0:17:15.04:0,15,220	0/0:33,0:33:63.21:0,63,1020	0/0:20,0:20:45.15:0,45,731	1/1:10,17:27:51.17:1166,51,0	1/1:4,15:19:45.11:1039,45,0	1/1:10,13:23:39.13:927,39,0	1/1:10,25:37:20.42:1553,20,0	0/0:16,0:16:39.12:0,39,606	0/0:33,0:32:60.20:0,60,976	0/0:7,0:7:6.02:0,6,98
chr10	23579643	.	T	TA	14160.54	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-8.330;DP=674;FS=3.497;HRun=6;HaplotypeScore=82.1119;InbreedingCoeff=0.9998;MQ=75.36;MQ0=0;MQRankSum=-1.110;QD=33.48;ReadPosRankSum=0.233;VQSLOD=4.6738;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:87.14:0,87,871	1/1:1,12:13:36.12:453,36,0	0/0:16,0:15:42.06:0,42,419	0/0:21,0:21:33.86:0,34,439	1/1:3,30:33:84.27:1057,84,0	1/1:1,18:19:54.17:679,54,0	1/1:0,18:18:54.17:679,54,0	1/1:3,35:38:99:1257,102,0	1/1:3,13:16:39.12:491,39,0	1/1:3,41:45:99:1567,126,0	1/1:2,17:19:51.12:624,51,0	1/1:2,23:25:66.21:830,66,0	1/1:0,27:28:81.26:1017,81,0	1/1:4,16:20:51.16:638,51,0	1/1:0,29:28:81.26:1019,81,0	1/1:2,21:23:60.19:754,60,0	0/0:21,0:21:57.13:0,57,582	0/0:23,0:23:66.15:0,66,673	0/0:22,0:21:48.10:0,48,489	0/0:40,0:40:99:0,111,1119	0/0:14,0:14:36.06:0,36,359	1/1:2,24:26:69.22:868,69,0	1/1:1,18:19:48.15:604,48,0	1/1:5,14:19:42.13:528,42,0	1/1:3,30:33:87.28:1095,87,0	0/0:26,1:27:40.42:0,40,717	0/0:24,0:23:66.14:0,66,672	0/0:10,0:10:30.07:0,30,306
chr10	23579755	.	G	GAC	35197.75	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-4.123;DP=743;FS=4.104;HRun=0;HaplotypeScore=106.4725;InbreedingCoeff=0.9877;MQ=83.09;MQ0=0;MQRankSum=-10.057;QD=50.43;ReadPosRankSum=6.109;VQSLOD=5.8106;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,56:61:99:2892,151,0	1/1:0,6:6:18.06:348,18,0	0/0:24,0:23:57.57:0,58,813	0/0:20,0:21:50.29:0,50,731	1/1:2,34:36:99:1912,99,0	1/1:0,23:23:66.23:1275,66,0	1/1:2,21:23:63.22:1201,63,0	1/1:6,33:41:99:2160,120,0	1/1:2,23:25:66.23:1275,66,0	1/1:5,28:34:96.29:1778,96,0	1/1:2,22:24:60.21:1159,60,0	1/1:0,26:29:72.25:1391,72,0	1/1:5,24:29:72.25:1366,72,0	1/1:2,27:29:75.26:1444,75,0	1/1:1,25:27:66.23:1275,66,0	1/1:3,18:21:54.18:1019,54,0	1/1:2,33:36:87.30:1681,87,0	1/1:2,12:14:33.11:638,33,0	1/1:2,14:16:48.14:892,48,0	1/1:1,26:27:75.26:1447,75,0	1/1:2,22:24:63.22:1217,63,0	1/1:3,20:23:63.22:1205,63,0	1/1:3,25:29:69.17:1333,69,0	1/1:1,29:30:84.29:1623,84,0	1/1:2,27:29:78.27:1506,78,0	1/1:4,25:29:78.24:1428,78,0	1/1:2,24:27:75.26:1444,75,0	1/1:0,5:5:15.05:290,15,0
chr10	23580087	.	TC	T	21618.08	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-10.483;DP=752;FS=4.764;HRun=3;HaplotypeScore=81.4802;InbreedingCoeff=0.9996;MQ=80.99;MQ0=0;MQRankSum=-7.786;QD=32.71;ReadPosRankSum=5.462;VQSLOD=5.0583;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:81.76:0,82,567	1/1:0,10:10:27.08:335,27,0	0/0:27,0:27:72.16:0,72,924	0/0:24,0:25:56.82:0,57,680	1/1:3,26:29:78.18:942,78,0	1/1:2,22:24:42.13:521,42,0	1/1:1,33:34:93.29:1153,93,0	1/1:4,40:44:99:1476,120,0	1/1:1,37:38:99:1264,102,0	1/1:0,25:25:66.21:818,66,0	1/1:0,18:18:50.99:577,51,0	1/1:1,20:21:60.19:744,60,0	1/1:0,29:29:81.25:1004,81,0	1/1:1,28:29:84.26:1041,84,0	1/1:0,28:28:78.25:967,78,0	1/1:0,25:25:60.19:744,60,0	1/1:1,28:29:78.24:967,78,0	1/1:0,20:20:48.15:595,48,0	1/1:4,23:27:66.18:794,66,0	1/1:2,28:30:78.09:897,78,0	1/1:3,43:46:99:1413,114,0	1/1:0,18:18:54.17:669,54,0	1/1:0,20:20:51.16:632,51,0	1/1:0,17:17:51.16:632,51,0	1/1:0,24:24:60.19:743,60,0	1/1:1,31:32:93.27:1126,93,0	1/1:1,29:30:84.26:1041,84,0	1/1:0,14:14:42.13:521,42,0
chr10	23580709	.	G	GA	2336.04	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-8.005;DP=572;FS=2.891;HRun=6;HaplotypeScore=55.3374;InbreedingCoeff=0.9468;MQ=73.50;MQ0=0;MQRankSum=-3.261;QD=29.20;ReadPosRankSum=0.120;VQSLOD=4.1685;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,11:13:27.09:339,27,0	0/0:10,0:10:24.05:0,24,245	0/0:8,0:8:9.83:0,10,75	0/0:11,0:11:4.64:0,5,118	0/0:30,0:30:78.17:0,78,795	0/0:21,0:21:54.10:0,54,544	0/0:12,0:12:19.10:0,19,292	0/0:29,0:29:81.15:0,81,805	0/0:16,0:16:38.95:0,39,384	0/0:32,0:32:84.17:0,84,849	0/0:29,0:29:78.14:0,78,780	0/0:16,0:16:39.09:0,39,398	0/0:15,0:15:33.07:0,33,337	0/0:19,0:19:57.12:0,57,575	0/0:26,0:26:66.15:0,66,673	0/0:19,0:19:54.12:0,54,550	0/0:15,0:15:36.08:0,36,367	0/0:19,0:19:51.11:0,51,520	0/0:23,0:23:63.12:0,63,631	0/0:33,0:33:90.20:0,90,917	0/0:11,0:11:33.08:0,33,337	0/0:25,0:25:75.16:0,75,758	0/0:24,0:24:69.15:0,69,703	0/0:12,0:12:33.07:0,33,336	0/0:37,0:37:99:0,111,1111	1/1:2,19:21:29.59:687,30,0	1/1:4,34:38:96.31:1207,96,0	1/1:1,7:8:21.07:263,21,0
chr10	23581839	.	A	ATTT	8109.65	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-8.914;DP=649;FS=0.000;HRun=1;HaplotypeScore=87.6479;InbreedingCoeff=0.9987;MQ=81.90;MQ0=0;MQRankSum=-1.886;QD=60.52;ReadPosRankSum=2.238;VQSLOD=5.0443;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,19:23:54.14:1214,54,0	0/0:8,0:8:24.08:0,24,410	0/0:21,0:22:60.14:0,60,985	0/0:14,0:14:42.01:0,42,631	0/0:34,0:34:99:0,99,1711	0/0:32,0:31:96.33:0,96,1683	0/0:26,0:26:78.27:0,78,1375	0/0:45,0:45:99:0,129,2261	0/0:12,0:12:36.10:0,36,579	0/0:22,0:22:60.21:0,60,1058	0/0:21,0:21:59.94:0,60,1017	0/0:25,0:25:75.24:0,75,1294	0/0:30,0:30:90.29:0,90,1549	0/0:26,0:26:78.24:0,78,1319	0/0:32,0:32:93.32:0,93,1636	0/0:22,0:22:66.23:0,66,1157	1/1:1,17:18:51.18:1196,51,0	1/1:0,14:15:39.13:915,39,0	1/1:5,16:21:63.22:1435,63,0	1/1:2,27:29:87.18:1815,87,0	1/1:2,26:28:66.23:1533,66,0	0/0:27,0:27:78.27:0,78,1373	0/0:13,0:13:33.11:0,33,582	0/0:21,0:21:63.22:0,63,1106	0/0:28,0:28:84.29:0,84,1482	0/0:25,0:25:72.24:0,72,1243	0/0:23,0:23:69.22:0,69,1188	0/0:7,0:7:21.07:0,21,370
chr10	23582704	.	GA	G	2934.13	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=9.698;DP=713;FS=1.805;HRun=6;HaplotypeScore=101.3082;InbreedingCoeff=0.9999;MQ=83.90;MQ0=0;MQRankSum=-0.602;QD=26.20;ReadPosRankSum=0.479;VQSLOD=3.3457;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:87.28:0,87,1129	0/0:14,0:14:42.14:0,42,553	0/0:30,0:30:78.18:0,78,982	0/0:20,0:20:47.83:0,48,520	0/0:43,0:43:99:0,123,1584	0/0:26,0:26:75.20:0,75,954	0/0:22,0:22:63.20:0,63,816	0/0:30,0:30:81.25:0,81,1032	0/0:23,0:23:69.22:0,69,907	0/0:36,0:36:99:0,105,1374	0/0:25,0:25:72.19:0,72,928	0/0:24,0:24:72.20:0,72,902	0/0:31,0:31:87.27:0,87,1123	0/0:28,0:28:78.23:0,78,987	0/0:34,0:34:99:0,102,1276	0/0:22,0:22:57.17:0,57,736	1/1:1,18:19:51.13:548,51,0	1/1:2,21:23:57.09:590,57,0	1/1:3,18:21:51.07:523,51,0	1/1:0,30:30:87.22:934,87,0	1/1:2,17:19:48.12:516,48,0	0/0:25,0:25:69.22:0,69,907	0/0:23,0:23:69.22:0,69,895	0/0:25,0:25:69.22:0,69,907	0/0:23,0:23:63.20:0,63,816	0/0:21,0:21:63.20:0,63,815	0/0:34,0:34:93.30:0,93,1220	0/0:11,0:11:30.10:0,30,394
chr10	23583892	.	G	GA	10134.27	PASS	AB=1.000;AC=35;AF=0.625;AN=56;BaseQRankSum=-14.362;DP=646;FS=3.349;HRun=9;HaplotypeScore=61.4785;InbreedingCoeff=0.9455;MQ=74.20;MQ0=1;MQRankSum=1.585;QD=23.68;ReadPosRankSum=1.018;VQSLOD=5.8221;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:11:32.03:0,32,266	1/1:1,10:11:30.08:332,30,0	0/1:18,0:17:1.80:2,0,142	0/0:11,0:11:18.46:0,18,156	1/1:4,29:33:81.22:896,81,0	1/1:4,32:36:38.13:877,38,0	1/1:4,15:20:41.93:438,42,0	1/1:9,22:31:57.58:602,58,0	1/1:3,25:28:72.18:788,72,0	1/1:10,18:28:66.17:724,66,0	1/1:3,17:20:52.38:567,52,0	1/1:4,19:23:60.16:657,60,0	1/1:3,16:19:25.07:498,25,0	1/1:4,24:28:66.18:730,66,0	1/1:4,17:21:9.78:339,10,0	1/1:4,16:20:39.11:431,39,0	0/0:14,0:14:26.96:0,27,234	0/0:20,0:20:50.99:0,51,446	0/0:24,0:24:38.93:0,39,402	0/0:36,1:37:62.77:0,63,771	0/0:14,0:14:38.99:0,39,338	1/1:1,19:22:31.08:520,31,0	1/1:9,28:37:38.13:872,38,0	1/1:1,12:13:33.09:365,33,0	1/1:2,18:20:45.12:498,45,0	0/0:25,1:26:32.80:0,33,514	0/0:48,0:48:99:0,126,1087	0/0:12,0:12:35.99:0,36,313
chr10	23584046	.	GA	G	1069.94	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=9.152;DP=521;FS=0.494;HRun=10;HaplotypeScore=53.0427;InbreedingCoeff=0.8720;MQ=70.31;MQ0=0;MQRankSum=-0.079;QD=12.44;ReadPosRankSum=3.508;VQSLOD=3.0559;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,0:17:6.05:55,6,0	0/0:6,0:6:12.01:0,12,121	0/0:14,0:13:15.01:0,15,144	0/1:8,0:8:0.96:1,0,176	0/0:36,1:37:58.18:0,58,833	0/0:36,0:37:99:0,111,1194	0/0:13,0:13:36.10:0,36,398	0/0:32,0:32:84.04:0,84,894	0/0:17,0:17:51.13:0,51,556	0/0:22,0:22:54.14:0,54,591	0/0:19,0:20:53.96:0,54,569	0/0:18,0:18:51.14:0,51,564	0/0:13,0:13:30.08:0,30,332	0/0:19,1:20:23.61:0,24,467	0/0:19,0:19:57.15:0,57,630	0/0:20,0:21:56.98:0,57,604	0/0:19,0:19:51.12:0,51,555	0/0:12,0:12:30.08:0,30,330	0/0:16,0:16:38.94:0,39,412	0/0:25,0:26:69:0,69,735	0/0:10,0:10:27.07:0,27,299	0/0:15,0:15:39.09:0,39,417	0/0:16,0:16:42.11:0,42,457	0/0:11,0:11:33.03:0,33,343	0/0:21,0:21:63.16:0,63,690	1/1:3,20:23:29.80:488,30,0	1/1:4,27:31:65.98:573,66,0	1/1:0,7:7:12:104,12,0
chr10	23586559	.	GCT	G	1046.46	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=9.374;DP=516;FS=1.964;HRun=0;HaplotypeScore=71.4143;InbreedingCoeff=0.9461;MQ=82.61;MQ0=0;MQRankSum=-9.054;QD=19.38;ReadPosRankSum=-1.091;VQSLOD=3.6002;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:69.24:0,69,1387	0/0:12,0:12:36.11:0,36,695	0/0:18,0:18:54.18:0,54,1041	0/0:13,0:13:35.83:0,36,621	0/0:29,0:29:84.29:0,84,1692	0/0:21,0:21:63.22:0,63,1279	0/0:16,0:16:48.16:0,48,975	0/0:34,0:34:99:0,99,1910	0/0:19,0:19:57.18:0,57,1121	0/0:19,0:19:57.19:0,57,1113	0/0:30,0:30:90.27:0,90,1787	0/0:17,0:17:51.15:0,51,998	0/0:15,0:15:45.15:0,45,913	0/0:24,0:24:72.25:0,72,1451	0/0:18,0:18:54.19:0,54,1086	0/0:19,0:19:57.20:0,57,1141	1/1:1,6:7:15:139,15,0	1/1:1,3:4:11.92:100,12,0	1/1:4,10:14:36.54:374,37,0	1/1:5,19:24:63.13:573,63,0	1/1:1,4:5:2.99:24,3,0	0/0:9,0:9:27.09:0,27,549	0/0:22,0:22:66.23:0,66,1341	0/0:13,0:13:39.13:0,39,774	0/0:24,0:24:72.23:0,72,1418	0/0:22,0:22:66.23:0,66,1342	0/0:34,0:33:99:0,99,2004	0/0:11,0:11:33.11:0,33,670
chr10	23586562	.	ATGGCT	A	1731.43	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=10.544;DP=520;FS=2.015;HRun=0;HaplotypeScore=102.4069;InbreedingCoeff=0.9391;MQ=82.46;MQ0=0;MQRankSum=-8.760;QD=33.95;ReadPosRankSum=-0.105;VQSLOD=3.5400;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:69.24:0,69,2237	0/0:11,0:11:33.11:0,33,1045	0/0:17,0:17:50.96:0,51,1348	0/0:14,0:14:38.87:0,39,1084	0/0:29,0:29:84.29:0,84,2746	0/0:24,0:24:72.25:0,72,2269	0/0:16,0:16:48.16:0,48,1599	0/0:35,0:35:99:0,102,3195	0/0:19,0:19:57.16:0,57,1711	0/0:18,0:18:54.19:0,54,1710	0/0:31,0:31:93.32:0,93,2969	0/0:17,0:17:51.18:0,51,1591	0/0:15,0:15:45.12:0,45,1292	0/0:27,0:27:81.28:0,81,2584	0/0:18,0:18:54.19:0,54,1739	0/0:19,0:19:57.20:0,57,1899	1/1:0,6:6:14.64:211,15,0	1/1:1,3:4:9.03:141,9,0	1/1:0,14:14:36.95:558,37,0	1/1:3,19:22:60.16:938,60,0	1/1:1,4:5:3.01:45,3,0	0/0:9,0:9:27.09:0,27,847	0/0:22,0:22:66.23:0,66,2136	0/0:13,0:13:39.13:0,39,1236	0/0:25,0:25:75.26:0,75,2352	0/0:22,0:22:66.23:0,66,2204	0/0:34,0:33:99:0,102,3078	0/0:11,0:11:33.11:0,33,1099
chr10	23587745	.	G	GCATAA	881.64	PASS	AB=0.900;AC=8;AF=0.174;AN=46;BaseQRankSum=0.691;DP=133;FS=0.000;HRun=0;HaplotypeScore=74.0775;InbreedingCoeff=0.3718;MQ=72.50;MQ0=0;MQRankSum=-1.733;QD=24.49;ReadPosRankSum=0.642;VQSLOD=2.8247;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:0,1:1:1.25:0,1,3	0/0:3,0:3:8.26:0,8,44	0/0:7,0:6:13.67:0,14,223	0/1:9,0:8:2.99:3,0,93	0/0:6,0:6:15.47:0,15,81	0/0:9,0:9:24.08:0,24,166	0/0:1,0:1:2.60:0,3,10	0/0:22,0:22:57.86:0,58,647	0/0:5,0:5:10.80:0,11,99	0/0:5,0:5:12.29:0,12,77	0/0:5,0:5:7.11:0,7,25	0/0:2,0:2:2.60:0,3,10	0/0:4,0:4:8.29:0,8,88	./.	./.	./.	1/1:3,7:10:2.13:379,2,0	1/1:1,2:5:6.44:111,6,0	1/1:3,5:8:3.09:383,3,0	0/1:3,1:4:20.84:118,0,21	./.	0/0:1,0:1:2.37:0,2,8	0/0:2,0:2:4.74:0,5,17	./.	0/0:7,0:7:19.47:0,19,154	0/0:6,0:6:17.06:0,17,166	0/0:5,0:5:10.71:0,11,56	0/0:5,0:5:10.98:0,11,53
chr10	23587748	.	TAATA	T	595.54	PASS	AB=0.892;AC=16;AF=0.333;AN=48;BaseQRankSum=-0.823;DP=126;FS=6.412;HRun=0;HaplotypeScore=72.2627;InbreedingCoeff=-0.3682;MQ=73.21;MQ0=0;MQRankSum=-4.778;QD=7.09;ReadPosRankSum=-4.469;VQSLOD=-0.1097;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:1,0:1:3.01:62,3,0	0/1:3,0:3:51.92:52,0,127	0/0:8,0:7:17.78:0,18,354	0/0:8,0:7:12.91:0,13,121	0/1:6,0:6:98.81:99,0,240	0/0:8,0:8:1.84:0,2,469	0/0:1,0:1:3.01:0,3,67	0/1:20,0:20:5.75:6,0,1075	0/1:5,0:5:10.22:10,0,186	0/1:4,1:5:47.81:48,0,209	0/1:5,0:5:37.57:38,0,57	0/0:2,0:2:3.01:0,3,67	0/0:4,0:4:9.03:0,9,197	./.	./.	0/1:0,1:1:0:0,0,0	0/1:6,2:8:41.49:86,0,41	0/1:2,1:3:53.71:54,0,74	0/1:6,2:8:99:104,0,144	0/1:3,1:4:49.78:50,0,96	./.	0/0:1,0:1:3.01:0,3,64	0/1:2,0:2:16.20:16,0,45	./.	0/1:7,0:7:62.13:62,0,299	0/1:6,0:6:43.71:44,0,319	0/0:5,0:5:12.03:0,12,206	0/0:5,0:5:12.01:0,12,227
chr10	23587754	.	A	ATATGTATTT	12748.39	PASS	AC=48;AF=0.923;AN=52;BaseQRankSum=-3.094;DP=154;FS=3.990;HRun=0;HaplotypeScore=45.3849;InbreedingCoeff=0.2848;MQ=66.64;MQ0=0;MQRankSum=-3.317;QD=91.72;ReadPosRankSum=1.438;VQSLOD=4.4499;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,1:1:3.01:100,3,0	1/1:1,4:5:12:411,12,0	0/0:6,0:7:0.91:0,1,218	0/0:7,0:6:2.59:0,3,20	1/1:0,6:8:24.01:817,24,0	1/1:2,7:9:24.04:1026,24,0	1/1:1,1:2:6.02:222,6,0	1/1:3,21:30:87.21:2898,87,0	1/1:0,5:5:12.04:510,12,0	1/1:1,4:6:18.04:683,18,0	1/1:0,6:6:9.03:431,9,0	1/1:0,1:2:3.01:144,3,0	1/1:0,4:4:9.03:366,9,0	1/1:2,0:2:3.01:64,3,0	1/1:1,0:1:3.01:64,3,0	1/1:1,0:1:2.97:20,3,0	1/1:8,3:11:30.09:926,30,0	1/1:4,1:5:14.94:373,15,0	1/1:4,4:8:18.06:735,18,0	1/1:1,1:2:6.02:234,6,0	./.	1/1:0,1:1:3.01:144,3,0	1/1:0,2:2:6.02:287,6,0	./.	1/1:1,5:7:15.05:680,15,0	1/1:2,4:6:12.04:575,12,0	1/1:0,4:6:9.03:431,9,0	1/1:3,5:9:18.02:610,18,0
chr10	23588242	.	CA	C	382.78	PASS	AB=0.874;AC=7;AF=0.125;AN=56;BaseQRankSum=5.189;DP=640;FS=20.970;HRun=15;HaplotypeScore=88.7258;InbreedingCoeff=0.3513;MQ=70.00;MQ0=0;MQRankSum=0.696;QD=3.42;ReadPosRankSum=3.584;VQSLOD=-0.4455;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,12:22:25.87:162,26,0	0/0:6,1:8:1.57:0,2,127	0/1:17,1:15:21.37:21,0,53	0/1:13,0:10:12.05:12,0,34	0/0:28,2:31:21.06:0,21,382	0/0:34,2:37:39.12:0,39,546	0/0:16,1:17:12.77:0,13,196	0/0:19,2:23:22.47:0,22,299	0/0:22,1:23:37.42:0,37,395	0/0:26,0:31:44.62:0,45,356	0/0:27,2:32:13.32:0,13,315	0/0:13,0:21:26.78:0,27,204	0/0:18,2:20:11.76:0,12,184	0/0:21,0:23:50.50:0,50,389	0/0:31,0:32:47.41:0,47,479	0/0:26,1:28:40.69:0,41,424	0/0:19,0:19:34.98:0,35,262	0/0:19,0:19:28.01:0,28,202	0/0:16,0:20:38.18:0,38,274	0/0:25,2:29:11.46:0,11,355	0/0:9,0:9:15:0,15,132	0/0:29,0:29:50.76:0,51,406	0/0:22,1:24:31.48:0,31,364	0/0:13,0:13:32.95:0,33,275	0/0:32,1:37:46.49:0,46,506	0/1:13,12:25:25.08:206,0,25	1/1:27,7:34:3.14:111,3,0	0/0:3,0:3:2.98:0,3,22
chr10	23588801	.	G	GA	4590.82	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=12.723;DP=526;FS=4.099;HRun=4;HaplotypeScore=65.9192;InbreedingCoeff=0.9967;MQ=74.01;MQ0=0;MQRankSum=-1.590;QD=36.44;ReadPosRankSum=-0.075;VQSLOD=5.1413;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,27:29:72.20:964,72,0	0/0:6,0:6:18.05:0,18,204	0/0:10,0:10:27.06:0,27,294	0/0:11,0:11:30.55:0,31,337	0/0:24,0:24:66.19:0,66,748	0/0:27,0:27:72.15:0,72,786	0/0:15,0:15:39.09:0,39,433	0/0:37,0:37:99:0,105,1169	0/0:17,0:17:48.14:0,48,544	0/0:19,0:19:54.15:0,54,611	0/0:22,0:22:66.19:0,66,749	0/0:14,0:14:42.09:0,42,458	0/0:14,0:14:39.09:0,39,433	0/0:16,0:16:45.13:0,45,508	0/0:20,0:20:57.16:0,57,646	0/0:23,0:23:57.16:0,57,646	1/1:1,17:18:48.16:653,48,0	1/1:0,11:11:33.11:451,33,0	1/1:3,22:25:66.19:868,66,0	1/1:1,24:25:69.17:917,69,0	1/1:0,18:18:54.18:739,54,0	0/0:8,0:8:24.07:0,24,272	0/0:23,0:23:57.16:0,57,646	0/0:15,0:15:42.12:0,42,476	0/0:21,0:21:63.15:0,63,694	0/0:20,0:20:57.16:0,57,647	0/0:29,0:28:81.23:0,81,918	0/0:9,0:9:21.06:0,21,238
chr10	23589206	.	ATATTATTATTATTAT	A	2077.51	PASS	AB=1.000;AC=33;AF=0.917;AN=36;BaseQRankSum=0.168;DP=170;FS=0.000;HRun=0;HaplotypeScore=84.5414;InbreedingCoeff=0.1754;MQ=63.68;MQ0=2;MQRankSum=0.437;QD=15.98;ReadPosRankSum=0.369;VQSLOD=1.6364;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:7,0:7:0:0,0,0	./.	0/0:3,0:2:3.01:0,3,48	./.	1/1:2,2:4:6.02:148,6,0	1/1:11,1:12:12.03:309,12,0	./.	1/1:28,0:25:18.05:294,18,0	1/1:7,0:7:6.02:162,6,0	1/1:8,0:8:11.97:168,12,0	1/1:6,0:6:2.99:24,3,0	1/1:5,0:6:3.01:92,3,0	1/1:5,1:6:3.01:107,3,0	1/1:0,5:5:3.01:85,3,0	1/1:2,1:3:6.02:169,6,0	1/1:5,1:6:6.01:146,6,0	1/1:3,0:3:6.02:120,6,0	./.	1/1:7,0:6:3.01:89,3,0	./.	./.	./.	./.	./.	1/1:4,0:4:1.25:81,1,0	1/1:5,0:13:6:96,6,0	./.	1/1:5,0:5:8.91:75,9,0
chr10	23589234	.	T	TCCAAA	638.79	PASS	AB=0.969;AC=10;AF=0.200;AN=50;BaseQRankSum=3.616;DP=131;FS=2.412;HRun=0;HaplotypeScore=74.5903;InbreedingCoeff=0.2050;MQ=43.86;MQ0=9;MQRankSum=-2.079;QD=14.86;ReadPosRankSum=-0.162;VQSLOD=2.8731;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:5,2:7:2.04:175,2,0	0/0:3,0:3:3.88:0,4,27	0/0:1,0:1:3.01:0,3,70	0/1:0,0:1:0:0,0,0	0/0:5,0:5:9.03:0,9,179	0/0:10,0:10:26.26:0,26,427	./.	0/0:22,0:16:39.60:0,40,831	0/0:2,0:2:6.02:0,6,132	0/0:10,0:10:8.10:0,8,376	0/0:1,0:1:3.01:0,3,63	0/0:4,0:4:6.02:0,6,96	0/0:5,0:5:8.81:0,9,71	0/0:5,0:5:3.01:0,3,63	0/0:4,0:4:6.02:0,6,132	0/0:4,0:4:12.04:0,12,222	0/1:6,1:7:84.94:85,0,105	1/1:0,1:1:3.01:94,3,0	0/1:10,0:5:45.83:46,0,204	0/0:4,0:3:6.02:0,6,102	0/0:1,0:1:3:0,3,28	./.	./.	0/0:1,0:1:3.01:0,3,30	0/0:2,0:2:6.02:0,6,135	0/1:9,0:9:83.11:83,0,84	1/1:8,0:8:18.06:283,18,0	0/0:4,0:3:9.03:0,9,178
chr10	23589237	.	T	TCCAAA	927.97	PASS	AB=0.975;AC=8;AF=0.167;AN=48;BaseQRankSum=3.096;DP=130;FS=1.093;HRun=0;HaplotypeScore=75.8071;InbreedingCoeff=0.2069;MQ=42.98;MQ0=9;MQRankSum=-2.186;QD=22.09;ReadPosRankSum=1.185;VQSLOD=2.8875;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:7,0:7:0.31:173,0,0	0/0:2,0:2:1.82:0,2,5	0/0:1,0:1:3.01:0,3,70	./.	0/0:4,0:4:6.02:0,6,133	0/0:10,0:10:22.14:0,22,319	./.	0/0:23,0:17:48.52:0,49,886	0/0:2,0:2:6.02:0,6,116	0/0:11,0:11:26.08:0,26,350	0/0:1,0:1:3.01:0,3,38	0/0:3,0:3:3.01:0,3,50	0/0:5,0:5:11.53:0,12,84	0/0:5,0:5:3.01:0,3,63	0/0:4,0:4:6.96:0,7,133	0/0:4,0:4:6.01:0,6,92	0/1:7,0:7:53.83:54,0,152	1/1:1,0:1:3.01:79,3,0	0/1:11,0:6:55.45:55,0,223	0/0:3,0:2:6.02:0,6,109	0/0:1,0:1:3.01:0,3,31	./.	./.	0/0:1,0:1:3.01:0,3,30	0/0:3,0:3:6.02:0,6,135	0/1:8,1:9:4.41:173,0,4	1/1:1,6:7:18.06:519,18,0	0/0:4,0:3:9.03:0,9,131
chr10	23589269	.	GTAGTAGTAGTAGTTA	G	5097.47	PASS	AB=1.000;AC=34;AF=0.680;AN=50;BaseQRankSum=-5.276;DP=219;FS=14.137;HRun=0;HaplotypeScore=106.0947;InbreedingCoeff=0.5514;MQ=42.17;MQ0=13;MQRankSum=4.007;QD=39.52;ReadPosRankSum=-0.524;VQSLOD=3.2776;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:8:7.74:0,8,88	1/1:0,3:3:3.01:117,3,0	0/0:33,0:7:1.39:0,1,134	0/0:23,0:3:7.16:0,7,86	0/1:6,0:6:0:0,0,0	1/1:4,3:7:15.05:484,15,0	1/1:0,4:4:3.01:95,3,0	1/1:15,17:31:51.17:871,51,0	1/1:2,0:2:3.01:36,3,0	1/1:11,0:11:20.85:510,21,0	./.	1/1:4,0:4:3.01:35,3,0	1/1:9,0:9:15.05:429,15,0	1/1:5,0:5:6.02:101,6,0	1/1:1,5:6:9.03:337,9,0	1/1:2,0:2:3.01:36,3,0	0/0:7,0:7:11.99:0,12,173	0/1:2,0:2:11.19:31,0,11	0/0:8,0:8:15.09:0,15,279	0/0:6,0:6:12.04:0,12,207	0/0:3,0:3:5.91:0,6,65	./.	1/1:1,0:1:3.01:75,3,0	./.	1/1:4,0:4:3.01:113,3,0	1/1:7,3:10:15.05:440,15,0	1/1:0,16:16:27.09:1001,27,0	1/1:5,0:5:15.05:389,15,0
chr10	23589272	.	GTAGTAGTAGTTA	G	4439.41	PASS	AB=0.875;AC=33;AF=0.660;AN=50;BaseQRankSum=-1.359;DP=214;FS=9.358;HRun=0;HaplotypeScore=95.2653;InbreedingCoeff=0.2412;MQ=42.39;MQ0=13;MQRankSum=3.326;QD=31.71;ReadPosRankSum=-0.655;VQSLOD=2.6779;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:8,0:8:9.03:9,0,43	1/1:3,0:3:3:99,3,0	0/0:33,0:7:5.03:0,5,155	0/0:23,0:3:7.16:0,7,75	0/1:2,4:6:0.02:0,0,0	0/1:7,0:7:3.03:372,0,3	1/1:4,0:4:3.01:75,3,0	0/1:29,0:28:99:686,0,151	1/1:2,0:2:3.01:36,3,0	0/1:1,10:11:0.72:612,0,1	./.	1/1:4,0:4:2.80:35,3,0	1/1:1,8:9:15:511,15,0	1/1:5,0:5:6.02:83,6,0	1/1:6,0:6:9.03:285,9,0	1/1:2,0:2:3.01:36,3,0	0/0:6,0:6:11.83:0,12,109	1/1:2,0:2:1.89:35,2,0	0/1:7,0:7:1.82:2,0,155	0/0:7,0:7:12.03:0,12,136	0/0:3,0:3:3.89:0,4,34	./.	1/1:1,0:1:3.01:48,3,0	./.	1/1:4,0:4:3.01:93,3,0	0/1:9,0:9:16.87:335,0,17	1/1:16,0:16:27.09:825,27,0	1/1:5,0:5:15.05:263,15,0
chr10	23589281	.	GTTA	G	3159.53	PASS	AB=0.967;AC=43;AF=0.860;AN=50;BaseQRankSum=3.070;DP=228;FS=4.217;HRun=0;HaplotypeScore=78.3663;InbreedingCoeff=-0.1081;MQ=43.59;MQ0=12;MQRankSum=1.121;QD=13.98;ReadPosRankSum=3.351;VQSLOD=3.0884;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,5:9:10.51:88,11,0	1/1:3,0:3:3.01:46,3,0	0/1:34,2:10:66.98:67,0,150	0/1:24,0:4:1.83:2,0,51	0/1:6,0:6:0.02:0,0,0	0/1:9,1:10:14.83:321,0,15	1/1:4,0:4:3.01:35,3,0	0/1:27,0:27:99:557,0,442	1/1:0,5:5:3.01:36,3,0	0/1:11,0:11:22:303,0,22	./.	1/1:1,3:4:2.80:35,3,0	1/1:9,0:9:14.97:221,15,0	1/1:4,1:5:6.02:83,6,0	1/1:6,0:6:9.03:128,9,0	1/1:1,3:4:3.01:36,3,0	1/1:6,0:6:4.04:62,4,0	1/1:1,1:2:5.99:59,6,0	1/1:6,1:7:20.75:160,21,0	1/1:4,4:8:11.78:73,12,0	1/1:3,0:3:5.92:39,6,0	./.	1/1:2,0:2:3.01:47,3,0	./.	1/1:4,0:4:3.01:34,3,0	0/1:9,1:10:49.48:278,0,49	1/1:16,0:16:27.08:335,27,0	1/1:5,0:5:15.05:237,15,0
chr10	23589307	.	AACCATGTGAC	A	1860.77	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=2.786;DP=223;FS=4.548;HRun=0;HaplotypeScore=98.7385;InbreedingCoeff=0.7114;MQ=64.78;MQ0=0;MQRankSum=-5.183;QD=54.73;ReadPosRankSum=0.832;VQSLOD=3.0308;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,5:7:12.04:400,12,0	0/0:3,0:3:3.01:0,3,92	0/0:9,0:7:18.53:0,19,801	0/0:11,0:7:18.04:0,18,624	0/0:4,0:4:9.03:0,9,479	0/0:13,0:13:39.13:0,39,1796	0/0:7,0:7:12.04:0,12,575	0/0:32,0:32:84.29:0,84,4383	0/0:7,0:7:9.03:0,9,479	0/0:10,0:10:27.09:0,27,1214	0/0:2,0:2:6.02:0,6,320	0/0:5,0:5:9.03:0,9,460	0/0:9,0:9:18.06:0,18,657	0/0:6,0:6:18.06:0,18,929	0/0:8,0:8:18.06:0,18,754	0/0:6,0:6:12.04:0,12,639	1/1:0,3:3:9.03:300,9,0	1/1:1,2:3:6.02:200,6,0	1/1:2,3:5:6.02:200,6,0	1/1:2,10:12:27.06:821,27,0	1/1:2,2:4:3.01:100,3,0	0/0:1,0:1:3.01:0,3,159	0/0:2,0:2:6.02:0,6,320	0/0:2,0:2:3.01:0,3,160	0/0:6,0:6:12.04:0,12,570	0/0:11,0:11:33.11:0,33,1571	0/0:21,0:21:42.14:0,42,1637	0/0:14,0:14:42.14:0,42,2227
chr10	23589583	.	AAATAATAAT	A	5075.44	PASS	AC=38;AF=0.826;AN=46;BaseQRankSum=-1.578;DP=190;FS=15.151;HRun=0;HaplotypeScore=71.0099;InbreedingCoeff=0.6081;MQ=60.29;MQ0=5;MQRankSum=-6.109;QD=35.74;ReadPosRankSum=2.472;VQSLOD=2.9360;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,0:5:6.02:92,6,0	1/1:1,1:2:3.01:83,3,0	0/0:7,0:6:5.93:0,6,99	./.	1/1:3,6:9:9.03:242,9,0	1/1:6,7:13:21.07:554,21,0	1/1:0,1:1:3.01:83,3,0	1/1:14,6:20:18.06:477,18,0	1/1:2,1:4:7.27:169,7,0	1/1:3,6:9:18.06:500,18,0	1/1:0,5:5:9.03:250,9,0	./.	1/1:1,5:6:15.05:417,15,0	./.	1/1:1,2:3:6.02:167,6,0	1/1:0,3:3:9.03:250,9,0	1/1:2,0:3:3.01:35,3,0	1/1:10,1:13:9.03:207,9,0	1/1:10,0:11:15.05:314,15,0	1/1:6,0:15:24.08:503,24,0	1/1:2,0:3:2.02:61,2,0	1/1:1,1:2:2.97:20,3,0	./.	./.	1/1:3,8:11:24.08:652,24,0	0/0:4,0:5:9.03:0,9,172	0/0:7,0:14:15.05:0,15,283	0/0:1,0:13:27.09:0,27,521
chr10	23590423	.	TTCTC	T	7204.97	PASS	AB=0.753;AC=41;AF=0.820;AN=50;BaseQRankSum=-1.400;DP=622;FS=0.000;HRun=0;HaplotypeScore=151.8948;InbreedingCoeff=0.5249;MQ=55.68;MQ0=7;MQRankSum=-1.846;QD=14.83;ReadPosRankSum=-0.138;VQSLOD=3.9137;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:9,2:12:22.55:83,0,23	1/1:5,5:10:15.05:225,15,0	./.	./.	1/1:12,15:32:44.85:585,45,0	1/1:11,20:33:48.08:696,48,0	1/1:10,8:19:17.84:244,18,0	1/1:27,0:27:3:48,3,0	1/1:12,13:28:24.08:469,24,0	1/1:15,10:26:36.11:532,36,0	1/1:10,15:24:42.06:604,42,0	1/1:12,6:19:18.06:286,18,0	1/1:10,18:29:42.09:630,42,0	0/1:16,0:19:33.45:33,0,48	1/1:12,9:25:30.06:411,30,0	1/1:14,12:32:33.08:481,33,0	1/1:5,0:7:5.97:48,6,0	1/1:4,0:7:9.01:83,9,0	1/1:14,0:17:18.02:167,18,0	1/1:14,0:29:18.02:168,18,0	./.	1/1:12,7:21:24.02:361,24,0	1/1:14,12:29:30.72:423,31,0	0/1:7,10:16:11.64:220,0,12	1/1:11,7:19:14.85:408,15,0	0/0:15,0:29:63.22:0,63,1174	0/0:26,0:33:56.19:0,56,1323	0/0:9,0:16:23.37:0,23,340
chr10	23590468	.	A	AGT	3034.32	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=4.182;DP=675;FS=1.529;HRun=0;HaplotypeScore=167.9626;InbreedingCoeff=0.9952;MQ=59.63;MQ0=6;MQRankSum=-5.057;QD=30.34;ReadPosRankSum=-0.456;VQSLOD=4.8982;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,12:16:20.38:404,20,0	0/0:10,0:10:27.09:0,27,355	0/0:29,0:21:24.23:0,24,474	0/0:35,0:23:50.85:0,51,663	0/0:34,0:35:54.35:0,54,955	0/0:27,0:27:51.15:0,51,645	0/0:14,0:14:23.94:0,24,312	0/0:37,0:37:62.80:0,63,1187	0/0:33,0:33:72.23:0,72,924	0/0:28,0:28:75.23:0,75,957	0/0:26,0:26:72.10:0,72,917	0/0:23,0:23:60.14:0,60,760	0/0:32,0:32:71.46:0,71,970	0/0:22,0:22:66.18:0,66,832	0/0:23,0:23:48.14:0,48,615	0/0:26,0:26:57.17:0,57,733	1/1:2,12:14:21.07:358,21,0	1/1:1,10:11:26.98:419,27,0	1/1:5,15:20:48.16:810,48,0	1/1:8,20:29:54.18:923,54,0	1/1:1,9:10:18.06:308,18,0	0/0:22,0:22:47.94:0,48,623	0/0:34,0:33:59.11:0,59,995	0/0:14,0:14:30.06:0,30,394	0/0:25,0:25:51.14:0,51,691	0/0:29,0:29:72.19:0,72,900	0/0:31,0:30:74.07:0,74,902	0/0:20,0:19:37.44:0,37,506
chr10	23590568	.	AATACAC	A	419.81	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=1.471;DP=714;FS=0.000;HRun=0;HaplotypeScore=175.3002;InbreedingCoeff=0.9949;MQ=80.90;MQ0=0;MQRankSum=-4.697;QD=41.98;ReadPosRankSum=-2.117;VQSLOD=2.6970;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,10:10:24.08:513,24,0	0/0:9,0:9:24.08:0,24,853	0/0:27,0:27:69.22:0,69,2219	0/0:12,0:12:33.01:0,33,1046	0/0:25,0:25:72.25:0,72,2561	0/0:27,0:26:75.26:0,75,2615	0/0:25,0:25:72.25:0,72,2402	0/0:29,0:29:87.30:0,87,2984	0/0:28,0:28:84.27:0,84,2736	0/0:41,0:41:99:0,120,4215	0/0:29,0:29:84.27:0,84,2879	0/0:26,0:26:78.27:0,78,2724	0/0:39,0:39:99:0,114,3986	0/0:32,0:32:90.30:0,90,3012	0/0:39,0:39:99:0,111,3848	0/0:32,0:32:96.33:0,96,3376	0/0:23,0:23:66.23:0,66,2314	0/0:18,0:18:51.18:0,51,1757	0/0:13,0:13:33.11:0,33,1161	0/0:33,0:33:99:0,99,3509	0/0:10,0:10:30.10:0,30,1070	0/0:26,0:26:78.27:0,78,2720	0/0:33,0:33:96.32:0,96,3323	0/0:23,0:23:63.22:0,63,2230	0/0:30,0:30:87.30:0,87,3066	0/0:31,0:31:90.31:0,90,3162	0/0:30,0:30:87.30:0,87,3090	0/0:14,0:14:39.13:0,39,1357
chr10	23591538	.	A	AGCCGAGAG	1171.95	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-0.839;DP=674;FS=0.000;HRun=0;HaplotypeScore=167.9058;InbreedingCoeff=0.9982;MQ=70.92;MQ0=1;MQRankSum=-4.600;QD=37.80;ReadPosRankSum=-0.733;VQSLOD=3.2481;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,19:28:30.10:1266,30,0	0/0:9,0:9:27.09:0,27,775	0/0:24,0:21:50.35:0,50,1430	0/0:21,0:20:56.69:0,57,1341	0/0:26,0:26:78.24:0,78,2071	0/0:18,0:18:51.17:0,51,1453	0/0:24,0:24:72.25:0,72,2000	0/0:39,0:39:99:0,114,2896	0/0:22,0:22:66.21:0,66,1832	0/0:21,0:21:63.21:0,63,1721	0/0:21,0:21:63.21:0,63,1651	0/0:36,0:36:99:0,105,2946	0/0:20,0:20:54.16:0,54,1487	0/0:28,0:28:75.22:0,75,1962	0/0:29,0:29:87.27:0,87,2279	0/0:21,0:21:63.22:0,63,1800	0/0:34,0:34:93.30:0,93,2524	0/0:16,0:16:48.11:0,48,1215	0/0:16,0:16:42.14:0,42,1146	0/0:15,0:15:36.11:0,36,974	0/0:39,0:39:99:0,114,3101	0/0:20,0:20:60.21:0,60,1712	0/0:13,0:13:39.13:0,39,1077	0/0:36,0:36:99:0,108,3014	0/0:22,0:22:63.19:0,63,1641	0/0:28,0:28:81.26:0,81,2112	0/0:32,0:32:96.31:0,96,2616	0/0:13,0:13:39.08:0,39,900
chr10	23592101	.	GAGGAGGAAA	G	107.64	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=1.738;DP=698;FS=4.878;HRun=0;HaplotypeScore=233.3317;InbreedingCoeff=0.9887;MQ=63.09;MQ0=1;MQRankSum=-2.341;QD=9.79;ReadPosRankSum=-3.993;VQSLOD=1.8286;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:5,6:10:17.19:198,17,0	0/0:17,0:17:51.18:0,51,1726	0/0:28,0:21:50.72:0,51,968	0/0:28,0:22:38.55:0,39,992	0/0:23,0:23:64.09:0,64,2197	0/0:34,0:34:95.53:0,96,2712	0/0:20,0:20:48.01:0,48,1027	0/0:30,0:27:69.12:0,69,1273	0/0:22,0:22:66.17:0,66,1858	0/0:22,0:22:56.54:0,57,1436	0/0:20,0:20:60.10:0,60,1761	0/0:27,0:26:72.15:0,72,2142	0/0:36,0:36:99:0,108,3201	0/0:35,0:35:87.76:0,88,2778	0/0:31,0:31:90.71:0,91,2663	0/0:35,0:35:93.15:0,93,2682	0/0:18,0:18:29.58:0,30,1074	0/0:31,0:31:88.86:0,89,2401	0/0:14,0:13:29.99:0,30,693	0/0:27,0:27:75.23:0,75,2419	0/0:32,0:32:91.09:0,91,2656	0/0:15,0:15:45.10:0,45,1425	0/0:16,0:16:43:0,43,1265	0/0:35,0:35:99:0,102,2812	0/0:20,0:20:54.30:0,54,1622	0/0:24,0:24:69.69:0,70,1965	0/0:32,0:31:96.26:0,96,3316	0/0:15,0:15:32.94:0,33,1014
chr10	23592118	.	AGAC	A	90	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.534;DP=649;FS=10.541;HRun=0;HaplotypeScore=137.3765;InbreedingCoeff=0.9759;MQ=62.51;MQ0=1;MQRankSum=-3.086;QD=11.25;ReadPosRankSum=-1.893;VQSLOD=2.6298;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,8:7:14.98:178,15,0	0/0:16,0:16:46.33:0,46,942	0/0:24,0:16:33.24:0,33,513	0/0:20,0:15:21.98:0,22,627	0/0:26,0:26:72.19:0,72,1558	0/0:39,0:39:99:0,102,2120	0/0:16,0:16:42.09:0,42,807	0/0:30,0:27:78.06:0,78,1556	0/0:19,0:19:57.11:0,57,1175	0/0:16,0:16:45.02:0,45,766	0/0:23,0:23:54.08:0,54,1063	0/0:26,0:25:63.14:0,63,1285	0/0:37,0:37:99:0,102,1965	0/0:34,0:34:99:0,99,2030	0/0:25,0:25:72.17:0,72,1495	0/0:33,0:33:93.26:0,93,1981	0/0:15,0:15:39:0,39,692	0/0:26,0:26:71.88:0,72,1317	0/0:7,0:7:21.03:0,21,434	0/0:30,0:30:81.09:0,81,1643	0/0:29,0:29:84.23:0,84,1786	0/0:14,0:14:41.89:0,42,771	0/0:14,0:14:36.02:0,36,631	0/0:31,0:31:87.05:0,87,1572	0/0:23,0:23:66.22:0,66,1447	0/0:18,0:18:48.03:0,48,915	0/0:37,0:36:99:0,111,2286	0/0:13,0:13:36.12:0,36,826
chr10	23592160	.	A	ACT	212.67	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.210;DP=614;FS=13.999;HRun=0;HaplotypeScore=92.5769;InbreedingCoeff=0.9821;MQ=66.06;MQ0=1;MQRankSum=-2.613;QD=30.38;ReadPosRankSum=0.024;VQSLOD=4.5987;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,7:7:15.05:301,15,0	0/0:9,0:9:27.04:0,27,409	0/0:22,0:12:33.91:0,34,435	0/0:20,0:17:36.52:0,37,530	0/0:30,0:30:75.21:0,75,1133	0/0:34,0:34:99:0,99,1556	0/0:22,0:22:63.20:0,63,999	0/0:37,0:37:99:0,105,1621	0/0:16,0:16:48.06:0,48,698	0/0:21,0:21:57.19:0,57,915	0/0:21,0:21:57.19:0,57,924	0/0:20,0:19:57.18:0,57,901	0/0:39,0:39:99:0,111,1773	0/0:24,0:24:69.23:0,69,1100	0/0:24,0:24:72.25:0,72,1159	0/0:32,0:32:87.24:0,87,1322	0/0:12,0:12:36.12:0,36,585	0/0:17,0:15:42.14:0,42,679	0/0:17,0:12:36.11:0,36,535	0/0:27,0:27:72.23:0,72,1126	0/0:20,0:20:57.18:0,57,903	0/0:19,0:19:54.18:0,54,844	0/0:14,0:14:42.08:0,42,651	0/0:22,0:22:66.21:0,66,1048	0/0:23,0:23:69.24:0,69,1122	0/0:12,0:12:33.10:0,33,506	0/0:33,0:32:99:0,99,1520	0/0:20,0:19:60.20:0,60,952
chr10	23592239	.	CG	C	241.60	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.744;DP=537;FS=11.663;HRun=1;HaplotypeScore=55.9589;InbreedingCoeff=0.9538;MQ=61.17;MQ0=2;MQRankSum=-2.701;QD=26.84;ReadPosRankSum=-1.523;VQSLOD=1.8960;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,9:9:24.08:335,24,0	0/0:7,0:7:21.03:0,21,306	0/0:16,0:11:24.38:0,24,336	0/0:12,0:8:21.07:0,21,330	0/0:39,0:39:99:0,102,1549	0/0:33,0:33:99:0,99,1546	0/0:17,0:17:48.16:0,48,762	0/0:38,0:38:99:0,111,1711	0/0:13,0:13:36.12:0,36,574	0/0:21,0:21:60.20:0,60,935	0/0:23,0:23:57.19:0,57,908	0/0:14,0:13:39.13:0,39,622	0/0:26,0:26:75.25:0,75,1173	0/0:20,0:20:60.20:0,60,957	0/0:19,0:19:57.19:0,57,909	0/0:28,0:28:81.26:0,81,1268	0/0:14,0:14:42.14:0,42,670	0/0:15,0:15:45.15:0,45,717	0/0:9,0:7:21.07:0,21,336	0/0:19,0:19:57.19:0,57,908	0/0:4,0:4:12.04:0,12,191	0/0:23,0:23:63.21:0,63,1001	0/0:18,0:18:45.14:0,45,693	0/0:12,0:12:33.11:0,33,527	0/0:27,0:27:81.28:0,81,1286	0/0:21,0:21:60.18:0,60,913	0/0:31,0:31:90.27:0,90,1378	0/0:9,0:9:27.09:0,27,429
chr10	23592460	.	CTTT	C	9666.94	PASS	AB=0.638;AC=46;AF=0.821;AN=56;BaseQRankSum=-10.610;DP=546;FS=9.951;HRun=12;HaplotypeScore=99.7453;InbreedingCoeff=0.6597;MQ=57.32;MQ0=15;MQRankSum=0.648;QD=23.52;ReadPosRankSum=1.027;VQSLOD=3.0633;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:13,1:24:13.07:13,0,35	1/1:2,5:7:18.02:214,18,0	0/0:44,0:16:7.08:0,7,225	0/0:47,0:15:4.76:0,5,131	1/1:7,13:20:54.03:619,54,0	1/1:5,18:23:57.16:720,57,0	1/1:10,5:15:33.06:387,33,0	1/1:24,9:28:47.90:546,48,0	1/1:1,16:17:33.10:417,33,0	1/1:6,20:26:64.74:784,65,0	1/1:4,7:11:26.99:320,27,0	1/1:1,9:10:27.08:338,27,0	1/1:4,8:12:33.09:402,33,0	1/1:7,10:18:45.02:518,45,0	1/1:7,13:20:39.09:490,39,0	1/1:5,9:14:30.05:365,30,0	1/1:4,24:28:41.87:702,42,0	1/1:5,11:17:3.75:243,4,0	1/1:5,21:26:27.05:674,27,0	1/1:6,13:19:51.16:630,51,0	1/1:4,6:10:15.03:189,15,0	1/1:2,4:6:18.06:220,18,0	1/1:1,5:6:15.04:189,15,0	1/1:4,2:6:15.03:168,15,0	1/1:5,11:16:38.43:449,38,0	0/1:9,2:25:20.36:71,0,20	0/0:7,0:25:31.53:0,32,107	0/0:1,0:14:17.92:0,18,53
chr10	23592510	.	TTTTG	T	1626.79	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=-0.248;DP=494;FS=2.941;HRun=0;HaplotypeScore=151.3267;InbreedingCoeff=0.7062;MQ=61.24;MQ0=5;MQRankSum=-1.072;QD=28.05;ReadPosRankSum=-6.290;VQSLOD=2.0651;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:20:24.18:0,24,666	0/0:5,0:5:12.04:0,12,210	0/0:27,0:16:14.87:0,15,288	0/0:34,0:14:21.73:0,22,246	0/0:28,0:28:43.94:0,44,1124	0/0:20,0:20:4.98:0,5,668	0/0:16,0:16:42.11:0,42,664	0/0:25,0:25:41.58:0,42,839	0/0:13,0:13:28.60:0,29,538	0/0:23,0:22:38.76:0,39,804	0/0:18,0:18:30.16:0,30,800	0/0:8,0:8:11.81:0,12,282	0/0:17,0:16:39.06:0,39,770	0/0:15,0:15:31.07:0,31,596	0/0:18,0:18:38.42:0,38,659	0/0:16,0:16:35.70:0,36,688	0/0:27,0:27:56.95:0,57,1332	0/0:12,0:12:33.57:0,34,625	0/0:24,0:24:63.15:0,63,1150	0/0:19,0:19:56.79:0,57,1138	0/0:5,0:5:15.03:0,15,270	0/0:12,0:12:13.41:0,13,530	0/0:12,0:12:1.75:0,2,343	0/1:7,0:7:18.33:18,0,216	0/0:17,0:17:32.34:0,32,724	1/1:9,18:27:11.46:855,11,0	1/1:3,15:18:42.08:672,42,0	1/1:3,3:6:14.97:223,15,0
chr10	23592514	.	G	GT	6426.42	PASS	AB=1.000;AC=37;AF=0.661;AN=56;BaseQRankSum=0.508;DP=485;FS=14.211;HRun=10;HaplotypeScore=109.7127;InbreedingCoeff=0.8308;MQ=59.62;MQ0=5;MQRankSum=-2.859;QD=20.02;ReadPosRankSum=-2.231;VQSLOD=3.4444;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:19:30.55:145,31,0	1/1:1,4:5:15.04:158,15,0	0/0:25,0:14:9.25:0,9,64	0/0:25,0:10:10.99:0,11,77	1/1:3,26:29:47.92:679,48,0	1/1:6,14:21:56.98:589,57,0	1/1:4,12:16:30.08:320,30,0	1/1:18,8:26:17.45:383,17,0	1/1:4,10:14:39.09:409,39,0	1/1:7,13:19:39.10:415,39,0	1/1:5,12:19:41.79:404,42,0	1/1:3,6:9:18.05:192,18,0	1/1:7,10:16:36.07:375,36,0	1/1:3,11:15:29.18:338,29,0	1/1:4,14:18:42.07:436,42,0	1/1:3,11:16:41.76:406,42,0	0/0:28,0:28:22.13:0,22,387	0/0:12,0:12:23.96:0,24,197	0/0:24,0:23:38.89:0,39,320	0/0:19,0:20:40.96:0,41,326	0/0:5,0:5:8.97:0,9,74	1/1:2,8:11:5.26:233,5,0	1/1:4,8:12:5.72:263,6,0	1/1:3,4:7:15.02:151,15,0	1/1:4,13:17:48.11:499,48,0	0/1:28,0:28:23.02:34,0,23	0/0:18,0:18:8.72:0,9,43	0/0:6,0:6:6.99:0,7,20
chr10	23592519	.	T	TG	1328.74	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=6.854;DP=477;FS=18.316;HRun=0;HaplotypeScore=123.8205;InbreedingCoeff=-0.0674;MQ=57.52;MQ0=4;MQRankSum=-5.672;QD=4.58;ReadPosRankSum=6.961;VQSLOD=1.3821;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,12:18:39.13:297,39,0	0/1:5,0:5:5.88:36,0,6	0/0:25,0:13:26.13:0,26,247	0/0:21,0:9:22.12:0,22,217	0/1:31,0:31:69.48:138,0,69	0/1:21,0:21:17.75:131,0,18	0/1:15,0:15:26.02:26,0,51	0/1:22,0:22:25.50:26,0,159	1/1:14,0:14:10.51:110,11,0	0/1:19,0:18:67.18:74,0,67	0/1:21,0:21:63.01:63,0,155	0/1:8,0:8:2.41:39,0,2	0/1:17,0:16:54.21:54,0,59	0/1:14,0:14:16.07:66,0,16	1/1:17,0:17:11.37:115,11,0	0/1:15,0:15:6.09:92,0,6	0/0:28,0:28:60.08:0,60,791	0/0:12,0:12:33.06:0,33,407	0/0:25,0:24:69.16:0,69,820	0/0:19,0:19:57.06:0,57,689	0/0:6,0:6:17.96:0,18,189	0/1:12,0:12:29.07:29,0,50	0/1:12,0:12:31.72:78,0,32	0/1:7,0:7:6.64:23,0,7	0/1:20,0:20:30.84:105,0,31	0/0:26,0:26:64.34:0,64,511	0/0:20,0:20:44.68:0,45,364	0/0:5,0:5:11.96:0,12,94
chr10	23592524	.	T	TTC	452.67	PASS	AB=1.000;AC=8;AF=0.143;AN=56;BaseQRankSum=-1.110;DP=445;FS=16.254;HRun=0;HaplotypeScore=128.8200;InbreedingCoeff=0.0967;MQ=54.92;MQ0=2;MQRankSum=0.804;QD=3.94;ReadPosRankSum=-2.726;VQSLOD=0.9834;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,12:16:44.85:526,45,0	0/0:5,0:5:11.12:0,11,43	0/0:19,0:11:1.64:0,2,80	0/0:16,0:8:9.08:0,9,109	0/0:32,0:32:24.74:0,25,231	0/1:20,0:20:6.60:7,0,83	0/0:13,0:13:25.02:0,25,93	0/0:20,0:19:0.19:0,0,176	0/0:13,0:13:2.22:0,2,47	0/0:17,0:17:33.19:0,33,129	0/0:21,0:21:7.10:0,7,154	0/0:9,0:9:12.58:0,13,37	0/0:15,0:14:4.39:0,4,65	0/0:13,0:13:23.78:0,24,84	0/0:16,0:16:31.40:0,31,106	0/1:14,0:14:22.97:23,0,36	0/0:27,0:27:68.31:0,68,841	0/0:10,0:10:26.36:0,26,359	0/0:22,0:22:57.12:0,57,704	0/0:19,0:19:57.13:0,57,710	0/0:7,0:7:17.99:0,18,196	0/1:12,0:12:0.87:1,0,106	0/0:11,0:11:12.62:0,13,98	0/1:6,0:6:6.98:7,0,14	0/1:21,0:21:2.85:3,0,161	0/1:24,0:24:4.27:4,0,319	0/0:19,0:19:20.21:0,20,328	0/0:4,0:4:12.01:0,12,108
chr10	23592563	.	ATTG	A	9918.70	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-1.467;DP=453;FS=8.995;HRun=0;HaplotypeScore=92.1041;InbreedingCoeff=0.9581;MQ=48.13;MQ0=6;MQRankSum=-3.944;QD=36.87;ReadPosRankSum=-0.115;VQSLOD=5.4544;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:16:42.14:0,42,868	1/1:0,6:6:18.06:289,18,0	0/0:20,0:4:9.03:0,9,170	0/0:15,0:2:6.02:0,6,131	1/1:3,24:27:69.20:1069,69,0	1/1:1,19:20:54.17:843,54,0	1/1:0,7:7:18.06:288,18,0	1/1:16,21:29:45.14:699,45,0	1/1:1,6:7:18.02:261,18,0	1/1:1,19:20:54.18:848,54,0	1/1:4,19:23:63.10:890,63,0	1/1:0,6:6:15.05:241,15,0	1/1:2,12:14:30.09:448,30,0	1/1:2,13:15:33.11:530,33,0	1/1:1,15:16:42.14:674,42,0	1/1:0,16:16:48.16:771,48,0	0/0:25,0:25:63.22:0,63,1344	0/0:11,0:11:30.10:0,30,662	0/0:23,0:17:39.60:0,40,811	0/0:23,0:23:66.21:0,66,1395	0/0:7,0:6:18.06:0,18,397	1/1:1,9:10:27.08:410,27,0	1/1:0,17:17:39.13:626,39,0	1/1:2,5:7:15.01:213,15,0	1/1:2,19:21:51.17:819,51,0	0/0:25,1:26:27.02:0,27,1501	0/0:13,0:13:27.09:0,27,561	0/0:3,0:3:8.89:0,9,102
chr10	23592613	.	TAAA	T	3484.81	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=5.575;DP=408;FS=7.405;HRun=7;HaplotypeScore=93.6303;InbreedingCoeff=0.9434;MQ=61.58;MQ0=0;MQRankSum=-7.015;QD=35.20;ReadPosRankSum=0.138;VQSLOD=2.2154;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,13:17:50.95:661,51,0	0/0:6,0:6:15.05:0,15,335	0/0:12,0:10:23.63:0,24,376	0/0:4,0:2:5.90:0,6,41	0/0:24,0:24:72.21:0,72,1431	0/0:19,0:19:48.16:0,48,1071	0/0:11,0:11:33.10:0,33,672	0/0:22,0:22:57.20:0,57,1184	0/0:13,0:13:36.12:0,36,779	0/0:22,0:22:63.22:0,63,1344	0/0:23,0:23:60.21:0,60,1298	0/0:8,0:8:18.06:0,18,402	0/0:14,0:14:33.10:0,33,655	0/0:11,0:11:27.09:0,27,601	0/0:13,0:13:36.08:0,36,732	0/0:7,0:7:18.06:0,18,402	1/1:8,16:24:66.08:840,66,0	1/1:5,9:14:42.03:516,42,0	1/1:5,10:15:42.08:515,42,0	1/1:5,19:24:66.19:872,66,0	1/1:2,3:5:6.01:81,6,0	0/0:10,0:10:30.10:0,30,619	0/0:18,0:18:41.67:0,42,916	0/0:4,0:4:12.03:0,12,227	0/0:18,0:18:48.16:0,48,946	0/0:18,0:18:54.18:0,54,1130	0/0:22,0:22:51.16:0,51,1081	0/0:9,0:9:24.08:0,24,536
chr10	23592616	.	A	AAT	1296.16	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=10.729;DP=399;FS=6.336;HRun=0;HaplotypeScore=92.3544;InbreedingCoeff=0.9388;MQ=61.72;MQ0=0;MQRankSum=-6.135;QD=13.09;ReadPosRankSum=0.062;VQSLOD=3.0563;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:17:44.78:302,45,0	0/0:5,0:5:15.05:0,15,230	0/0:11,0:9:22.77:0,23,228	0/0:5,0:2:5.74:0,6,36	0/0:25,0:25:75.21:0,75,1066	0/0:19,0:19:48.16:0,48,734	0/0:11,0:11:33.10:0,33,485	0/0:22,0:22:63.16:0,63,912	0/0:12,0:12:36.12:0,36,550	0/0:22,0:22:63.21:0,63,963	0/0:20,0:20:60.20:0,60,918	0/0:7,0:7:18.06:0,18,276	0/0:14,0:14:33.10:0,33,486	0/0:10,0:10:27.09:0,27,413	0/0:13,0:13:36.08:0,36,524	0/0:6,0:6:18.06:0,18,275	1/1:23,1:24:57.82:339,58,0	1/1:15,2:17:37.18:296,37,0	1/1:12,2:14:38.82:275,39,0	1/1:22,1:23:54.79:247,55,0	1/1:4,0:4:5.04:19,5,0	0/0:10,0:10:30.10:0,30,457	0/0:17,0:17:41.82:0,42,642	0/0:4,0:4:12.03:0,12,163	0/0:18,0:18:48.16:0,48,712	0/0:18,0:18:54.18:0,54,824	0/0:22,0:22:54.16:0,54,786	0/0:9,0:9:24.08:0,24,367
chr10	23592672	.	AT	A	1103.94	PASS	AC=6;AF=0.111;AN=54;BaseQRankSum=3.963;DP=387;FS=3.775;HRun=8;HaplotypeScore=52.5402;InbreedingCoeff=0.9312;MQ=63.41;MQ0=0;MQRankSum=-0.789;QD=21.65;ReadPosRankSum=2.595;VQSLOD=3.8936;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:42:0,42,437	0/0:4,0:4:12.04:0,12,144	0/0:17,1:6:6.91:0,7,127	./.	0/0:21,0:21:57.16:0,57,677	0/0:12,0:12:33.10:0,33,398	0/0:11,0:11:30.09:0,30,362	0/0:26,0:24:60.17:0,60,714	0/0:14,0:14:36.11:0,36,435	0/0:17,0:17:48.14:0,48,574	0/0:19,0:19:54.17:0,54,652	0/0:9,0:9:24.07:0,24,290	0/0:12,0:12:33.10:0,33,397	0/0:13,0:13:33.06:0,33,381	0/0:12,0:12:36.11:0,36,435	0/0:9,0:9:24.07:0,24,290	0/0:19,1:20:18.76:0,19,429	0/0:16,0:16:42.12:0,42,495	0/0:17,0:17:51.15:0,51,597	0/0:13,0:13:39.12:0,39,462	0/0:3,0:3:9.02:0,9,98	0/0:8,0:8:24.07:0,24,287	0/0:11,0:11:24.07:0,24,290	0/0:6,0:6:18.06:0,18,217	0/0:18,0:18:50.95:0,51,593	1/1:1,17:18:51.08:492,51,0	1/1:3,18:21:45.07:434,45,0	1/1:0,12:12:33.05:319,33,0
chr10	23592684	.	TA	T	1639.43	PASS	AB=0.947;AC=13;AF=0.232;AN=56;BaseQRankSum=6.575;DP=406;FS=33.581;HRun=9;HaplotypeScore=50.7975;InbreedingCoeff=0.8522;MQ=64.99;MQ0=0;MQRankSum=-2.123;QD=15.76;ReadPosRankSum=1.847;VQSLOD=1.8402;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,14:14:39.02:357,39,0	0/0:5,0:5:15.03:0,15,163	0/1:17,1:7:12.86:13,0,77	0/0:6,0:4:0:0,0,0	0/0:21,0:21:60.13:0,60,676	0/0:10,0:11:29.87:0,30,301	0/0:13,0:13:33.07:0,33,359	0/0:27,0:25:63.15:0,63,693	0/0:15,0:15:36.11:0,36,415	0/0:17,0:17:48.11:0,48,540	0/0:20,0:20:57.16:0,57,648	0/0:11,0:11:30.08:0,30,336	0/0:16,0:16:39.10:0,39,434	0/0:14,0:14:42.08:0,42,470	0/0:12,0:12:33.10:0,33,381	0/0:13,0:13:36.08:0,36,395	1/1:5,14:19:39.02:356,39,0	1/1:2,12:14:36.01:329,36,0	1/1:5,11:16:32.99:302,33,0	1/1:3,16:19:45.02:412,45,0	1/1:0,4:4:6:55,6,0	0/0:10,0:10:21.06:0,21,242	0/0:12,0:12:33.10:0,33,381	0/0:9,0:9:27.06:0,27,301	0/0:18,1:19:26.98:0,27,561	0/0:20,0:20:51.10:0,51,556	0/0:19,0:19:51.11:0,51,543	0/0:12,0:12:24.07:0,24,273
chr10	23593684	.	CT	C	7319.32	PASS	AB=0.567;AC=43;AF=0.768;AN=56;BaseQRankSum=3.734;DP=509;FS=1.125;HRun=10;HaplotypeScore=77.5527;InbreedingCoeff=0.7224;MQ=72.05;MQ0=7;MQRankSum=1.798;QD=19.68;ReadPosRankSum=3.299;VQSLOD=5.7656;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,23:23:50.99:442,51,0	0/1:4,8:12:9.20:158,0,9	0/0:52,0:15:22.08:0,22,179	0/0:38,1:16:12.57:0,13,133	1/1:0,18:18:50.98:443,51,0	0/1:5,14:19:24.24:271,0,24	1/1:2,12:14:26.99:234,27,0	1/1:8,17:25:48.91:417,49,0	1/1:2,8:10:26.99:234,27,0	1/1:0,14:14:38.98:339,39,0	1/1:3,25:28:41.81:590,42,0	1/1:1,11:13:32.02:266,32,0	1/1:3,14:17:38.98:339,39,0	1/1:2,12:14:35.99:313,36,0	1/1:0,16:16:41.99:365,42,0	1/1:3,7:10:17.99:156,18,0	1/1:0,12:12:32.98:287,33,0	1/1:3,11:14:29.98:260,30,0	1/1:4,19:23:56.97:494,57,0	1/1:4,27:31:47.80:643,48,0	1/1:0,4:4:12:104,12,0	1/1:1,5:6:12:103,12,0	0/1:1,10:11:0.24:159,0,0	1/1:2,12:14:17.89:156,18,0	1/1:1,23:24:62.99:547,63,0	0/0:19,1:20:27.74:0,28,537	0/0:15,1:16:22.05:0,22,461	0/0:6,0:6:12.03:0,12,133
chr10	23593805	.	CA	C	4920.29	PASS	AB=0.939;AC=47;AF=0.839;AN=56;BaseQRankSum=9.277;DP=463;FS=4.366;HRun=1;HaplotypeScore=154.9840;InbreedingCoeff=0.2863;MQ=66.60;MQ0=0;MQRankSum=-6.130;QD=11.36;ReadPosRankSum=8.663;VQSLOD=2.9366;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:21,1:22:31.96:281,32,0	1/1:11,1:11:10.40:144,10,0	0/0:16,0:16:47.65:0,48,694	0/0:14,0:14:42.11:0,42,594	1/1:18,0:18:10.75:175,11,0	1/1:19,1:20:20.63:203,21,0	0/1:17,0:17:27.58:113,0,28	0/1:16,1:16:40.26:126,0,40	1/1:13,0:13:11.22:137,11,0	1/1:17,0:17:19.27:202,19,0	0/1:13,0:13:10.48:71,0,10	1/1:12,2:13:12.07:187,12,0	1/1:12,2:14:15.44:220,15,0	1/1:19,1:20:55.69:314,56,0	1/1:17,3:20:26.20:282,26,0	1/1:14,0:14:38.30:188,38,0	1/1:28,2:29:70.81:357,71,0	1/1:26,1:27:25.08:279,25,0	1/1:10,0:10:2.88:97,3,0	0/1:13,1:13:5.40:129,0,5	1/1:18,1:19:27.96:195,28,0	1/1:14,0:14:6.02:83,6,0	0/1:7,2:9:27.11:50,0,27	1/1:14,2:15:36.80:225,37,0	1/1:16,2:18:45.93:290,46,0	1/1:15,1:16:20.79:200,21,0	1/1:20,1:21:7.41:256,7,0	1/1:8,0:8:22.69:118,23,0
chr10	23593806	.	AC	A	12496.61	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=4.559;DP=481;FS=15.451;HRun=4;HaplotypeScore=138.2404;InbreedingCoeff=0.9848;MQ=66.10;MQ0=2;MQRankSum=-8.295;QD=27.77;ReadPosRankSum=4.632;VQSLOD=3.0940;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,17:24:51.29:573,51,0	1/1:6,7:12:30.09:352,30,0	0/0:17,0:17:49.36:0,49,638	0/0:14,0:14:38.63:0,39,489	1/1:6,13:19:41.96:451,42,0	1/1:9,14:23:42.99:587,43,0	1/1:2,15:17:30.09:354,30,0	1/1:10,8:17:35.61:412,36,0	1/1:1,12:13:36.11:427,36,0	1/1:0,17:17:48.09:548,48,0	1/1:2,12:14:18.71:246,19,0	1/1:6,9:14:36.11:421,36,0	1/1:4,11:15:39.10:449,39,0	1/1:3,18:21:60.15:700,60,0	1/1:4,16:20:51.15:602,51,0	1/1:1,13:14:42.13:500,42,0	1/1:6,24:29:81.23:955,81,0	1/1:7,22:29:66.67:790,67,0	1/1:1,9:9:24.52:275,25,0	1/1:5,9:13:26.91:271,27,0	1/1:3,17:19:48.13:574,48,0	1/1:4,11:15:33.03:349,33,0	1/1:5,4:9:15.01:165,15,0	1/1:3,13:15:39.12:464,39,0	1/1:6,13:19:51.06:574,51,0	1/1:3,13:16:45.14:534,45,0	1/1:3,18:21:53.87:636,54,0	1/1:0,8:8:24.07:286,24,0
chr10	23593814	.	A	ACT	20817.73	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=4.105;DP=498;FS=2.472;HRun=0;HaplotypeScore=124.3011;InbreedingCoeff=0.9857;MQ=62.38;MQ0=6;MQRankSum=-6.718;QD=45.06;ReadPosRankSum=3.811;VQSLOD=6.2103;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,22:27:66.17:1250,66,0	1/1:0,10:9:24.08:456,24,0	0/0:21,0:19:54.18:0,54,794	0/0:15,0:14:39.10:0,39,565	1/1:5,16:22:33.09:597,33,0	1/1:2,17:19:57.19:1059,57,0	1/1:4,13:17:36.12:689,36,0	1/1:4,10:12:33.09:594,33,0	1/1:4,11:15:42.11:759,42,0	1/1:4,11:15:42.14:748,42,0	1/1:5,10:15:21.06:349,21,0	1/1:3,12:13:37.68:680,38,0	1/1:3,12:15:39.13:745,39,0	1/1:1,21:22:66.21:1233,66,0	1/1:4,17:21:57.20:1077,57,0	1/1:0,15:15:45.15:865,45,0	1/1:2,26:27:75.21:1375,75,0	1/1:2,27:28:75.21:1404,75,0	1/1:5,7:11:27.05:424,27,0	1/1:3,12:14:24.08:427,24,0	1/1:1,23:23:51.08:982,51,0	1/1:3,10:13:27.08:471,27,0	1/1:1,8:9:15.04:256,15,0	1/1:6,15:20:51.17:982,51,0	1/1:3,15:20:48.07:810,48,0	1/1:2,15:17:50.91:929,51,0	1/1:3,19:22:60.21:1144,60,0	1/1:1,8:9:27.09:512,27,0
chr10	23594707	.	A	AT	23247.33	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=14.691;DP=753;FS=0.000;HRun=0;HaplotypeScore=157.1024;InbreedingCoeff=0.9982;MQ=79.58;MQ0=2;MQRankSum=-4.714;QD=40.64;ReadPosRankSum=4.406;VQSLOD=4.0778;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:62,0:62:99:0,178,2458	1/1:0,6:6:18.06:270,18,0	0/0:27,0:27:78.15:0,78,988	0/0:32,0:32:81.14:0,81,977	1/1:0,21:22:57.12:826,57,0	1/1:0,18:17:45.15:674,45,0	1/1:0,28:28:75.25:1126,75,0	1/1:1,33:43:99:1626,120,0	1/1:0,27:29:81.21:1182,81,0	1/1:1,18:19:57.15:830,57,0	1/1:0,16:16:42.14:630,42,0	1/1:0,21:22:57.11:826,57,0	1/1:0,31:31:90.30:1340,90,0	1/1:0,28:28:78.26:1156,78,0	1/1:1,27:28:81.23:1213,81,0	1/1:0,30:30:84.28:1260,84,0	1/1:1,30:31:90.26:1349,90,0	1/1:0,29:29:81.27:1210,81,0	1/1:0,35:35:99:1535,105,0	1/1:1,31:32:84.28:1255,84,0	1/1:0,34:34:90.30:1345,90,0	1/1:0,13:13:36.12:540,36,0	1/1:0,17:17:45.15:676,45,0	1/1:0,35:35:96.32:1434,96,0	1/1:1,24:25:63.15:943,63,0	0/0:24,0:24:72.22:0,72,980	0/0:26,0:26:78.26:0,78,1090	0/0:10,0:10:30.10:0,30,409
chr10	23595150	.	TTA	T	2576.64	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.145;DP=552;FS=11.159;HRun=0;HaplotypeScore=83.4187;InbreedingCoeff=0.9824;MQ=68.07;MQ0=0;MQRankSum=-1.155;QD=39.64;ReadPosRankSum=1.700;VQSLOD=5.2751;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:36.10:0,36,623	0/0:8,0:8:24.08:0,24,440	0/0:15,0:15:42.11:0,42,673	0/0:7,0:7:12.51:0,13,214	0/0:36,0:36:99:0,99,1725	0/0:20,0:20:60.21:0,60,1112	0/0:22,0:22:66.19:0,66,1144	0/0:31,0:31:90.27:0,90,1549	0/0:16,0:16:48.13:0,48,849	0/0:29,0:29:87.26:0,87,1445	0/0:20,0:20:60.20:0,60,1088	0/0:21,0:21:63.21:0,63,1150	0/0:22,0:22:66.23:0,66,1219	0/0:28,0:28:84.29:0,84,1565	0/0:23,0:22:66.22:0,66,1157	0/0:15,0:15:45.15:0,45,822	0/0:23,0:23:63.14:0,63,1111	0/0:21,0:21:60.18:0,60,1084	0/0:27,0:27:78.14:0,78,1371	0/0:25,0:25:72.23:0,72,1291	0/0:5,0:5:15.05:0,15,266	0/0:8,0:8:24.08:0,24,447	0/0:20,0:20:60.21:0,60,1116	0/0:13,0:13:39.11:0,39,670	0/0:19,0:19:51.16:0,51,869	1/1:1,20:21:60.19:896,60,0	1/1:0,36:36:96.33:1456,96,0	1/1:0,8:8:24.08:367,24,0
chr10	23595436	.	TAACGATAA	T	19824.27	PASS	AC=50;AF=0.926;AN=54;BaseQRankSum=2.521;DP=396;FS=9.847;HRun=0;HaplotypeScore=124.9062;InbreedingCoeff=0.7580;MQ=64.84;MQ0=0;MQRankSum=-5.270;QD=53.01;ReadPosRankSum=4.536;VQSLOD=4.0313;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:18:30.08:739,30,0	1/1:1,8:9:18.06:486,18,0	0/0:13,0:13:30.10:0,30,1207	0/0:7,0:7:14.79:0,15,426	1/1:5,28:33:74.46:1905,74,0	1/1:0,11:11:30.10:809,30,0	1/1:2,8:9:21.07:567,21,0	1/1:7,16:23:48.09:872,48,0	1/1:2,10:12:30.10:801,30,0	1/1:4,22:26:66.23:1722,66,0	1/1:3,7:10:18.06:485,18,0	1/1:1,12:13:27.09:728,27,0	1/1:3,12:15:36.12:971,36,0	1/1:0,7:7:21.07:566,21,0	1/1:0,17:17:48.16:1295,48,0	1/1:0,14:14:39.13:1052,39,0	1/1:5,12:17:27.09:728,27,0	1/1:0,6:6:9.03:243,9,0	1/1:4,4:8:8.99:160,9,0	1/1:7,8:15:21.07:567,21,0	1/1:4,2:6:3.01:81,3,0	1/1:3,8:11:18.06:485,18,0	1/1:5,13:18:32.72:880,33,0	1/1:1,4:5:1.07:77,1,0	1/1:7,21:28:51.17:1376,51,0	1/1:6,18:24:48.09:1257,48,0	1/1:2,16:18:36.12:971,36,0	./.
chr10	23595441	.	ATAAAACG	A	9604.75	PASS	AB=0.977;AC=36;AF=0.667;AN=54;BaseQRankSum=10.989;DP=367;FS=7.930;HRun=0;HaplotypeScore=150.3880;InbreedingCoeff=-0.2102;MQ=68.07;MQ0=0;MQRankSum=-7.100;QD=27.84;ReadPosRankSum=10.046;VQSLOD=2.7246;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:10,9:19:88.68:507,0,89	1/1:8,0:8:18.06:253,18,0	0/0:16,0:16:45.15:0,45,1459	0/0:6,0:6:14.41:0,14,456	0/1:30,0:30:55.26:886,0,55	1/1:11,0:11:30.10:421,30,0	0/1:10,0:9:44.82:268,0,45	0/1:21,0:21:99:269,0,129	0/1:11,0:11:5.43:380,0,5	1/1:23,0:23:32.52:832,33,0	0/1:8,0:8:17.22:232,0,17	1/1:12,0:12:27.09:379,27,0	1/1:13,0:13:14.30:481,14,0	1/1:7,0:7:21.07:295,21,0	1/1:17,0:17:48.16:674,48,0	1/1:14,0:14:39.13:547,39,0	0/1:16,0:16:73.85:342,0,74	1/1:6,0:6:9.03:126,9,0	0/1:8,0:8:38.90:39,0,109	0/1:11,0:11:76.29:264,0,76	0/1:5,0:5:30.05:30,0,77	0/1:9,0:9:49.17:229,0,49	1/1:16,0:16:0.39:417,0,0	0/1:5,0:5:26.17:36,0,26	0/1:26,0:26:90.64:653,0,91	0/1:21,0:21:86.44:577,0,86	1/1:18,0:18:2.36:469,2,0	./.
chr10	23595542	.	C	CGTGTGTGT	3919.62	PASS	AB=0.715;AC=47;AF=0.904;AN=52;BaseQRankSum=-3.168;DP=490;FS=0.000;HRun=0;HaplotypeScore=133.4203;InbreedingCoeff=0.0435;MQ=45.18;MQ0=14;MQRankSum=0.124;QD=9.80;ReadPosRankSum=0.144;VQSLOD=1.7546;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:0.47:0,0,1	1/1:11,0:10:17.98:280,18,0	./.	./.	1/1:18,1:18:3.01:32,3,0	1/1:11,1:12:11.36:314,11,0	1/1:15,0:25:3.46:25,3,0	1/1:30,0:27:20.13:232,20,0	1/1:6,3:8:6.02:148,6,0	1/1:10,0:17:15.91:256,16,0	1/1:18,0:18:2.99:25,3,0	1/1:16,0:16:9.03:262,9,0	1/1:5,4:10:6.49:246,6,0	1/1:5,5:11:5.76:244,6,0	1/1:9,1:9:3.01:75,3,0	1/1:2,3:7:3.01:91,3,0	1/1:23,0:28:5.11:292,5,0	1/1:9,0:12:21.05:336,21,0	1/1:18,0:17:3.01:40,3,0	0/1:12,0:27:8.42:75,0,8	1/1:20,0:19:20.85:263,21,0	1/1:10,0:10:2.83:48,3,0	0/1:16,0:17:7.87:18,0,8	0/1:4,13:19:0.18:0,0,0	1/1:18,2:20:12:165,12,0	1/1:19,0:18:8.24:132,8,0	1/1:10,0:10:5.97:46,6,0	1/1:5,0:5:9.50:273,10,0
chr10	23598316	.	C	CT	990.66	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=1.602;DP=429;FS=6.969;HRun=9;HaplotypeScore=56.1163;InbreedingCoeff=0.8865;MQ=70.68;MQ0=0;MQRankSum=-0.257;QD=24.16;ReadPosRankSum=0.288;VQSLOD=4.4009;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:2,0:18:30.55:0,31,90	0/0:5,0:5:12:0,12,104	0/0:11,0:10:16.37:0,16,114	0/0:8,0:8:5.59:0,6,33	0/0:23,0:23:47.95:0,48,412	0/0:15,0:15:44.99:0,45,390	0/0:7,0:7:17.99:0,18,156	0/0:35,0:35:86.95:0,87,751	0/0:10,0:10:26.99:0,27,234	0/0:19,0:19:47.99:0,48,417	0/0:21,0:21:62.99:0,63,546	0/0:12,0:12:23.99:0,24,208	0/0:19,0:19:47.98:0,48,416	0/0:18,0:18:44.96:0,45,387	0/0:15,0:15:44.99:0,45,390	0/0:24,0:24:62.95:0,63,541	0/0:10,0:10:20.97:0,21,182	0/0:12,0:12:32.99:0,33,286	0/0:15,0:16:38.02:0,38,316	0/0:22,0:22:62.98:0,63,547	0/0:15,0:15:41.97:0,42,359	0/0:9,0:9:26.99:0,27,234	0/0:22,0:22:62.96:0,63,543	0/0:2,0:2:5.98:0,6,47	0/0:20,0:20:53.98:0,54,468	1/1:1,11:12:30.08:332,30,0	1/1:6,20:26:63.17:696,63,0	1/1:0,3:3:9.02:100,9,0
chr10	23598451	.	AC	A	2019.99	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=7.626;DP=470;FS=1.730;HRun=2;HaplotypeScore=47.5396;InbreedingCoeff=0.9819;MQ=67.03;MQ0=0;MQRankSum=0.106;QD=32.06;ReadPosRankSum=2.119;VQSLOD=3.3148;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:6:17.99:0,18,212	0/0:6,0:6:18.06:0,18,254	0/0:7,0:7:17.51:0,18,161	0/0:6,0:6:14.22:0,14,104	0/0:27,0:27:81.15:0,81,1081	0/0:20,0:20:60.18:0,60,830	0/0:10,0:10:27.09:0,27,381	0/0:35,0:35:99:0,102,1337	0/0:16,0:16:48.14:0,48,660	0/0:24,0:24:69.16:0,69,904	0/0:25,0:25:71.82:0,72,907	0/0:15,0:15:42.11:0,42,559	0/0:24,0:24:66.20:0,66,912	0/0:13,0:13:39.07:0,39,454	0/0:12,0:12:33.09:0,33,448	0/0:25,0:25:75.24:0,75,1043	0/0:8,0:8:23.95:0,24,311	0/0:9,0:9:24.02:0,24,295	0/0:24,0:24:69.11:0,69,831	0/0:25,0:25:75.19:0,75,1011	0/0:18,0:18:54.17:0,54,746	0/0:10,0:10:30.08:0,30,405	0/0:11,0:11:30.08:0,30,404	0/0:10,0:10:30.05:0,30,369	0/0:21,0:21:63.17:0,63,838	1/1:0,19:19:57.15:695,57,0	1/1:1,26:27:63.20:812,63,0	1/1:0,17:17:51.16:655,51,0
chr10	23598602	.	GATTTTTTTCTGGAATAATGTTATAC	G	417.97	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.962;DP=525;FS=0.000;HRun=0;HaplotypeScore=324.7932;InbreedingCoeff=0.9277;MQ=74.65;MQ0=0;MQRankSum=-2.931;QD=59.71;ReadPosRankSum=-0.065;VQSLOD=2.0805;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,4:7:9.03:501,9,0	0/0:8,0:8:24.08:0,24,2627	0/0:9,0:9:27.09:0,27,1537	0/0:9,0:9:24.05:0,24,1117	0/0:28,0:28:78.27:0,78,7954	0/0:21,0:21:63.22:0,63,6529	0/0:13,0:13:36.12:0,36,3565	0/0:33,0:33:99:0,99,7925	0/0:21,0:21:60.19:0,60,5449	0/0:21,0:21:63.21:0,63,5857	0/0:24,0:24:66.23:0,66,7241	0/0:16,0:16:48.16:0,48,5129	0/0:31,0:31:93.27:0,93,8939	0/0:16,0:16:45.15:0,45,4052	0/0:15,0:15:45.15:0,45,3732	0/0:23,0:23:69.24:0,69,7007	0/0:7,0:7:21.07:0,21,1506	0/0:9,0:9:27.09:0,27,2551	0/0:22,0:22:63.21:0,63,5274	0/0:31,0:31:90.30:0,90,8930	0/0:10,0:10:30.10:0,30,3483	0/0:15,0:15:42.14:0,42,3706	0/0:21,0:21:60.21:0,60,6129	0/0:11,0:11:30.10:0,30,2888	0/0:22,0:22:66.23:0,66,7006	0/0:28,0:28:84.29:0,84,8294	0/0:42,0:42:99:0,126,10611	0/0:12,0:12:33.11:0,33,3357
chr10	23599165	.	CA	C	1901.70	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=10.000;DP=556;FS=6.007;HRun=1;HaplotypeScore=106.1483;InbreedingCoeff=0.9614;MQ=72.46;MQ0=0;MQRankSum=-9.507;QD=38.81;ReadPosRankSum=-0.216;VQSLOD=3.3090;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:39.13:0,39,622	0/0:5,0:5:15.05:0,15,239	0/0:10,0:10:18.73:0,19,297	0/0:13,0:14:7.71:0,8,339	0/0:35,0:35:99:0,105,1670	0/0:20,0:20:57.16:0,57,856	0/0:13,0:13:39.08:0,39,571	0/0:32,0:32:90.16:0,90,1384	0/0:20,0:20:57.17:0,57,864	0/0:31,0:31:90.30:0,90,1414	0/0:35,0:35:99:0,105,1651	0/0:16,0:16:42.14:0,42,668	0/0:25,0:25:75.26:0,75,1194	0/0:22,0:22:66.22:0,66,1032	0/0:36,0:36:99:0,108,1668	0/0:11,0:11:30.10:0,30,479	0/0:9,0:9:27.07:0,27,401	0/0:6,0:6:18.06:0,18,285	0/0:18,0:18:51.17:0,51,810	0/0:31,0:31:93.30:0,93,1461	0/0:9,0:9:24.08:0,24,383	0/0:19,0:19:57.17:0,57,865	0/0:26,0:26:72.16:0,72,1088	0/0:11,0:11:33.11:0,33,527	0/0:38,0:38:99:0,114,1771	1/1:0,19:19:57.19:790,57,0	1/1:0,21:21:63.21:877,63,0	1/1:0,9:9:27.09:377,27,0
chr10	23599169	.	TA	T	10299.04	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-3.651;DP=559;FS=9.048;HRun=10;HaplotypeScore=78.8157;InbreedingCoeff=0.9175;MQ=71.29;MQ0=0;MQRankSum=-4.650;QD=19.32;ReadPosRankSum=5.088;VQSLOD=5.2834;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,0:16:7.76:41,8,0	1/1:0,5:6:14.03:110,14,0	0/0:12,0:11:21:0,21,211	0/0:14,0:14:20.90:0,21,216	1/1:4,31:35:86.96:755,87,0	1/1:0,18:18:50.99:443,51,0	1/1:2,12:14:32.99:287,33,0	1/1:3,31:34:89.95:776,90,0	1/1:3,16:19:44.98:391,45,0	1/1:2,29:31:58.73:678,59,0	1/1:5,28:35:88.04:741,88,0	1/1:2,13:15:35.98:310,36,0	1/1:1,25:26:71.98:625,72,0	1/1:4,17:21:50.98:443,51,0	1/1:4,29:33:86.98:755,87,0	1/1:5,6:11:14.98:130,15,0	1/1:2,7:9:20.99:182,21,0	1/1:1,5:6:11.99:104,12,0	1/1:4,16:20:44.97:391,45,0	1/1:3,28:31:80.97:703,81,0	1/1:3,8:11:17.98:156,18,0	1/1:3,14:17:41.99:365,42,0	1/1:6,21:27:53.96:469,54,0	1/1:0,12:12:35.99:313,36,0	1/1:3,33:36:95.98:834,96,0	1/1:1,0:19:36.67:109,37,0	1/1:4,0:22:41.42:135,41,0	1/1:3,0:9:18.33:55,18,0
chr10	23599470	.	CA	C	1351.66	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.976;DP=602;FS=11.991;HRun=8;HaplotypeScore=77.4813;InbreedingCoeff=0.9262;MQ=80.27;MQ0=0;MQRankSum=-5.216;QD=23.30;ReadPosRankSum=1.334;VQSLOD=3.6566;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:17:39.74:0,40,205	0/0:9,0:9:24.07:0,24,290	0/0:17,0:17:23.26:0,23,306	0/0:18,0:18:5.90:0,6,312	0/0:39,0:39:99:0,114,1365	0/0:30,0:30:81.24:0,81,964	0/0:13,0:13:33.10:0,33,398	0/0:35,0:35:93.27:0,93,1103	0/0:24,0:24:66.20:0,66,795	0/0:36,0:36:99:0,99,1188	0/0:35,0:35:90.28:0,90,1086	0/0:21,0:21:57.17:0,57,688	0/0:25,0:25:58.34:0,58,672	0/0:19,0:19:48.15:0,48,580	0/0:20,0:20:60.18:0,60,725	0/0:16,0:16:45.14:0,45,544	0/0:11,0:11:30.01:0,30,351	0/0:2,0:2:6.02:0,6,72	0/0:27,0:27:60.15:0,60,681	0/0:35,1:36:76.32:0,76,1170	0/0:14,0:14:42.12:0,42,497	0/0:19,0:19:54.14:0,54,627	0/0:19,0:19:48.15:0,48,580	0/0:17,0:17:42.13:0,42,507	0/0:25,0:25:66.20:0,66,797	1/1:8,23:31:78.11:749,78,0	1/1:1,18:19:54.09:521,54,0	1/1:1,7:8:24.01:224,24,0
chr10	23599526	.	TA	T	2486.70	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-1.153;DP=675;FS=16.254;HRun=3;HaplotypeScore=102.9453;InbreedingCoeff=0.9576;MQ=81.55;MQ0=0;MQRankSum=-2.449;QD=33.60;ReadPosRankSum=1.754;VQSLOD=2.0440;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:51.10:0,51,709	0/0:12,0:12:36.12:0,36,518	0/0:20,0:20:60.18:0,60,823	0/0:16,0:16:39.11:0,39,541	0/0:44,0:44:99:0,126,1806	0/0:28,0:28:78.19:0,78,1098	0/0:16,0:16:48.16:0,48,691	0/0:42,0:42:99:0,114,1565	0/0:19,0:19:57.17:0,57,778	0/0:48,0:48:99:0,141,1999	0/0:33,0:33:93.30:0,93,1321	0/0:22,0:22:66.21:0,66,921	0/0:23,0:23:69.23:0,69,993	0/0:31,0:31:90.30:0,90,1292	0/0:27,0:27:75.24:0,75,1064	0/0:18,0:18:51.16:0,51,713	0/0:14,0:14:42.12:0,42,585	0/0:3,0:3:6.02:0,6,86	0/0:25,0:25:66.21:0,66,931	0/0:34,0:34:99:0,99,1409	0/0:15,0:15:45.14:0,45,626	0/0:27,0:27:81.26:0,81,1134	0/0:29,0:29:78.25:0,78,1107	0/0:9,0:9:27.09:0,27,389	0/0:28,0:28:84.27:0,84,1188	1/1:1,40:41:99:1512,123,0	1/1:0,27:27:75.24:929,75,0	1/1:0,6:6:15.05:186,15,0
chr10	23599699	.	A	AAGCT	6147.52	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-9.123;DP=627;FS=20.406;HRun=0;HaplotypeScore=101.8782;InbreedingCoeff=0.9386;MQ=80.34;MQ0=0;MQRankSum=-5.865;QD=73.18;ReadPosRankSum=3.530;VQSLOD=5.2157;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,29:34:78.22:2165,78,0	0/0:5,0:5:15.05:0,15,315	0/0:24,0:23:69.23:0,69,1333	0/0:23,0:21:59.19:0,59,1086	0/0:26,0:26:78.27:0,78,1605	0/0:22,0:22:60.21:0,60,1258	0/0:20,0:20:60.21:0,60,1258	0/0:28,0:28:81.25:0,81,1533	0/0:27,0:27:78.19:0,78,1551	0/0:24,0:24:72.25:0,72,1510	0/0:18,0:18:54.19:0,54,1132	0/0:23,0:23:69.24:0,69,1430	0/0:32,0:32:96.31:0,96,1932	0/0:30,0:30:84.29:0,84,1744	0/0:35,0:35:99:0,105,2164	0/0:25,0:25:72.25:0,72,1480	0/0:14,0:14:42.14:0,42,833	0/0:4,0:4:2.78:0,3,180	0/0:19,0:19:54.16:0,54,1041	0/0:25,0:25:75.23:0,75,1497	0/0:39,0:39:99:0,114,2270	0/0:11,0:11:33.11:0,33,677	0/0:21,0:21:63.22:0,63,1321	0/0:22,0:22:66.21:0,66,1345	0/0:26,0:26:75.26:0,75,1557	1/1:1,21:22:66.23:1886,66,0	1/1:2,19:24:63.22:1749,63,0	1/1:0,4:4:12.04:347,12,0
chr10	23599828	.	A	AAAT	922.36	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=1.224;DP=643;FS=2.123;HRun=0;HaplotypeScore=92.0874;InbreedingCoeff=0.9933;MQ=80.68;MQ0=0;MQRankSum=-4.208;QD=51.24;ReadPosRankSum=-0.719;VQSLOD=5.4389;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,17:18:45.15:1017,45,0	0/0:10,0:10:30.10:0,30,500	0/0:24,0:24:66.23:0,66,1086	0/0:20,0:20:45.97:0,46,801	0/0:33,0:33:96.33:0,96,1590	0/0:26,0:26:72.25:0,72,1190	0/0:14,0:14:42.13:0,42,666	0/0:30,0:30:75.24:0,75,1202	0/0:13,0:13:39.12:0,39,586	0/0:39,0:39:99:0,108,1761	0/0:32,0:32:90.31:0,90,1496	0/0:19,0:19:57.19:0,57,949	0/0:26,0:26:72.23:0,72,1170	0/0:26,0:26:75.24:0,75,1209	0/0:23,0:23:66.23:0,66,1099	0/0:20,0:20:60.20:0,60,981	0/0:18,0:18:45.15:0,45,726	0/0:10,0:10:21.07:0,21,340	0/0:21,0:21:54.17:0,54,866	0/0:30,0:30:81.24:0,81,1298	0/0:19,0:19:54.18:0,54,900	0/0:29,0:29:84.29:0,84,1385	0/0:32,0:32:81.17:0,81,1285	0/0:16,0:16:42.14:0,42,682	0/0:30,0:30:87.28:0,87,1421	0/0:19,0:19:57.19:0,57,950	0/0:37,0:37:99:0,108,1757	0/0:9,0:9:24.06:0,24,358
chr10	23599901	.	TGAGA	T	1364.70	PASS	AB=0.834;AC=24;AF=0.522;AN=46;BaseQRankSum=0.904;DP=490;FS=0.000;HRun=0;HaplotypeScore=83.3449;InbreedingCoeff=0.3900;MQ=73.00;MQ0=3;MQRankSum=0.686;QD=5.66;ReadPosRankSum=-0.052;VQSLOD=1.8202;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:16:5.74:0,6,37	1/1:6,0:7:3:28,3,0	./.	0/0:34,0:18:0:0,0,0	1/1:20,1:21:3.01:46,3,0	0/1:16,0:18:15.12:63,0,15	./.	./.	0/0:14,0:17:11.23:0,11,60	./.	./.	1/1:10,5:14:12.04:185,12,0	1/1:9,5:14:12.04:185,12,0	1/1:13,6:20:14.92:212,15,0	1/1:8,4:12:5.92:92,6,0	1/1:16,9:27:20.81:301,21,0	1/1:8,0:9:4.25:31,4,0	0/0:4,0:4:3.01:0,3,48	1/1:15,0:14:2.92:46,3,0	0/1:22,1:27:15.89:38,0,16	0/0:7,0:9:5.49:0,5,24	0/1:15,2:18:3.44:84,0,3	0/0:11,0:11:3.01:0,3,47	0/1:9,2:14:41.22:72,0,41	1/1:19,5:24:9.02:139,9,0	0/0:19,0:19:33.09:0,33,508	0/0:20,0:23:18.04:0,18,268	0/0:9,0:11:11.83:0,12,170
chr10	23600484	.	CT	C	957.87	PASS	AB=0.593;AC=5;AF=0.089;AN=56;BaseQRankSum=8.004;DP=550;FS=2.449;HRun=10;HaplotypeScore=56.9920;InbreedingCoeff=0.6579;MQ=70.94;MQ0=0;MQRankSum=-0.971;QD=16.80;ReadPosRankSum=1.838;VQSLOD=4.1718;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:24.02:0,24,252	0/0:7,0:7:15.04:0,15,166	0/0:13,0:14:17:0,17,232	0/0:8,0:7:3.67:0,4,111	0/0:31,2:33:55.17:0,55,837	0/0:25,0:25:63.01:0,63,661	0/0:14,1:15:10.04:0,10,339	0/0:35,0:39:81.01:0,81,852	0/0:26,0:26:66.17:0,66,722	0/0:27,0:27:72.18:0,72,783	0/0:26,1:28:33.21:0,33,672	0/0:18,0:19:31.12:0,31,543	0/0:28,0:28:43.38:0,43,683	0/0:16,1:17:16.05:0,16,397	0/0:28,1:29:55.17:0,55,836	0/0:32,0:32:84.18:0,84,902	0/0:16,0:16:36.01:0,36,380	0/0:8,0:8:24:0,24,240	0/0:10,0:11:29.91:0,30,312	0/0:26,0:27:60:0,60,645	0/0:12,0:12:30.07:0,30,323	0/0:11,0:11:24.06:0,24,266	0/0:15,0:15:36.08:0,36,389	0/0:8,2:11:3.87:0,4,254	0/0:21,1:22:31.06:0,31,541	0/1:5,11:16:27.37:247,0,27	1/1:2,26:29:68.02:579,68,0	1/1:1,11:12:29.99:260,30,0
chr10	23600797	.	GTAGT	G	3728.16	PASS	AB=0.537;AC=7;AF=0.125;AN=56;BaseQRankSum=12.294;DP=585;FS=1.556;HRun=0;HaplotypeScore=97.5584;InbreedingCoeff=0.8042;MQ=82.55;MQ0=0;MQRankSum=-5.268;QD=46.03;ReadPosRankSum=2.766;VQSLOD=4.3301;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,16:17:45.15:839,45,0	0/0:9,0:9:27.09:0,27,685	0/0:20,0:20:48.14:0,48,1070	0/0:14,0:14:36.12:0,36,831	0/0:31,0:31:87.30:0,87,2307	0/0:27,0:27:75.26:0,75,1912	0/0:8,0:8:24.07:0,24,575	0/0:36,0:36:99:0,99,2548	0/0:15,0:15:45.15:0,45,1189	0/0:30,0:30:81.26:0,81,2049	0/0:33,0:33:84.28:0,84,2151	0/0:23,0:23:63.22:0,63,1645	0/0:22,0:22:66.23:0,66,1696	0/0:26,0:26:78.27:0,78,2048	0/0:20,0:20:57.20:0,57,1482	0/0:18,0:17:48.15:0,48,1204	0/0:22,0:22:63.22:0,63,1653	0/0:5,0:5:6.02:0,6,125	0/0:14,0:14:39.13:0,39,985	0/0:28,0:28:84.29:0,84,2203	0/0:27,0:27:81.26:0,81,2042	0/0:14,0:14:39.13:0,39,1016	0/0:27,0:27:78.26:0,78,1916	0/0:13,0:13:39.13:0,39,1040	0/0:22,0:22:66.23:0,66,1727	0/1:3,19:22:19.85:986,0,20	1/1:4,31:35:87.30:1623,87,0	1/1:2,5:7:15.05:280,15,0
chr10	23601066	.	GA	G	1775.92	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=9.841;DP=525;FS=1.623;HRun=7;HaplotypeScore=55.3748;InbreedingCoeff=0.9812;MQ=73.86;MQ0=1;MQRankSum=-1.036;QD=23.06;ReadPosRankSum=1.907;VQSLOD=3.7722;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,27:29:75.04:748,75,0	0/0:6,0:6:18.06:0,18,226	0/0:30,0:16:14.95:0,15,232	0/0:28,0:20:12.16:0,12,248	0/0:22,0:22:66.21:0,66,830	0/0:16,0:16:48.15:0,48,603	0/0:9,0:9:24.06:0,24,288	0/0:28,0:28:78.22:0,78,947	0/0:16,0:16:48.14:0,48,590	0/0:21,0:21:63.20:0,63,793	0/0:26,0:26:75.24:0,75,942	0/0:17,0:17:48.15:0,48,603	0/0:15,0:15:42.12:0,42,514	0/0:17,0:17:42.13:0,42,527	0/0:23,0:23:60.19:0,60,754	0/0:14,0:14:39.12:0,39,490	0/0:24,0:24:69.22:0,69,867	0/0:10,0:10:27.04:0,27,322	0/0:30,0:30:81.26:0,81,1019	0/0:25,0:25:66.21:0,66,829	0/0:15,0:15:39.12:0,39,491	0/0:10,0:10:24.08:0,24,302	0/0:20,0:20:54.17:0,54,679	0/0:11,0:11:33.11:0,33,414	0/0:15,0:15:42.13:0,42,528	1/1:4,17:21:48.10:483,48,0	1/1:0,19:19:51.12:520,51,0	1/1:0,8:8:18.04:184,18,0
chr10	23601171	.	CAG	C	283.43	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.632;DP=588;FS=6.262;HRun=0;HaplotypeScore=114.7028;InbreedingCoeff=0.9940;MQ=87.34;MQ0=0;MQRankSum=-3.524;QD=13.50;ReadPosRankSum=0.840;VQSLOD=2.9731;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,10:21:27.06:377,27,0	0/0:10,0:10:24.07:0,24,431	0/0:17,0:17:40.89:0,41,838	0/0:27,0:27:65.04:0,65,1303	0/0:30,0:30:87.30:0,87,1667	0/0:28,0:28:84.27:0,84,1589	0/0:21,0:21:54.15:0,54,974	0/0:33,0:32:99:0,99,1849	0/0:13,0:13:39.13:0,39,744	0/0:13,0:13:39.13:0,39,753	0/0:27,0:27:81.28:0,81,1563	0/0:17,0:17:51.16:0,51,931	0/0:28,0:28:81.28:0,81,1561	0/0:22,0:22:66.23:0,66,1263	0/0:20,0:20:48.16:0,48,927	0/0:17,0:17:48.16:0,48,927	0/0:34,0:34:96.33:0,96,1817	0/0:8,0:8:24.08:0,24,461	0/0:19,0:19:54.19:0,54,1044	0/0:24,0:24:72.25:0,72,1374	0/0:28,0:28:78.27:0,78,1496	0/0:11,0:11:33.10:0,33,588	0/0:23,0:23:60.19:0,60,1117	0/0:14,0:14:33.11:0,33,637	0/0:16,0:16:48.15:0,48,885	0/0:30,0:30:87.29:0,87,1649	0/0:24,0:24:66.18:0,66,1173	0/0:13,0:13:33.11:0,33,637
chr10	23601177	.	GTA	G	313.69	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.625;DP=567;FS=6.425;HRun=0;HaplotypeScore=118.7844;InbreedingCoeff=0.9873;MQ=88.37;MQ0=0;MQRankSum=-4.574;QD=31.37;ReadPosRankSum=0.867;VQSLOD=5.4501;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,10:10:30.10:408,30,0	0/0:7,0:7:18.06:0,18,348	0/0:17,0:17:36.60:0,37,833	0/0:25,0:25:70.26:0,70,1241	0/0:28,0:28:84.27:0,84,1587	0/0:28,0:28:84.29:0,84,1622	0/0:21,0:21:54.17:0,54,1007	0/0:34,0:33:99:0,102,1970	0/0:16,0:16:48.16:0,48,917	0/0:15,0:15:45.15:0,45,869	0/0:26,0:26:78.27:0,78,1506	0/0:16,0:16:48.16:0,48,926	0/0:25,0:25:69.24:0,69,1329	0/0:21,0:21:57.20:0,57,1100	0/0:19,0:19:54.19:0,54,1042	0/0:16,0:16:45.15:0,45,869	0/0:33,0:33:93.30:0,93,1752	0/0:8,0:8:24.04:0,24,425	0/0:22,0:22:66.22:0,66,1244	0/0:25,0:25:75.24:0,75,1415	0/0:27,0:27:72.21:0,72,1336	0/0:8,0:8:24.08:0,24,464	0/0:24,0:24:63.22:0,63,1216	0/0:16,0:16:42.13:0,42,765	0/0:16,0:16:48.15:0,48,895	0/0:29,0:29:84.27:0,84,1568	0/0:21,0:21:57.20:0,57,1088	0/0:14,0:14:36.12:0,36,695
chr10	23601202	.	CT	C	11285.39	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=0.847;DP=550;FS=27.321;HRun=9;HaplotypeScore=90.0284;InbreedingCoeff=0.9180;MQ=81.20;MQ0=0;MQRankSum=-8.537;QD=22.13;ReadPosRankSum=5.752;VQSLOD=3.5364;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,15:16:39.01:357,39,0	1/1:0,7:7:18.01:165,18,0	0/0:23,0:23:32.87:0,33,468	0/0:16,1:17:5.95:0,6,269	1/1:4,20:24:56.98:513,57,0	1/1:5,17:22:51.02:467,51,0	1/1:2,19:21:45.02:412,45,0	1/1:11,26:37:77.94:689,78,0	1/1:1,16:17:48.02:439,48,0	1/1:1,14:15:42.02:384,42,0	1/1:0,23:23:66.03:604,66,0	1/1:0,17:17:51.03:466,51,0	1/1:2,20:22:54.03:494,54,0	1/1:1,19:20:48.03:439,48,0	1/1:4,19:23:51.02:467,51,0	1/1:3,12:15:30.01:274,30,0	1/1:4,24:28:68.25:611,68,0	1/1:3,7:10:18:165,18,0	1/1:3,18:21:54.02:490,54,0	1/1:1,22:23:63.03:577,63,0	1/1:4,20:24:51.02:467,51,0	1/1:2,4:6:12:110,12,0	1/1:3,19:22:48.01:439,48,0	1/1:1,14:15:30.02:275,30,0	1/1:0,16:16:48.03:439,48,0	1/1:0,24:25:74.08:665,74,0	1/1:1,25:26:66.04:604,66,0	1/1:2,13:15:30.01:275,30,0
chr10	23601467	.	G	GTT	2382.15	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-7.948;DP=482;FS=1.748;HRun=8;HaplotypeScore=52.3106;InbreedingCoeff=0.9132;MQ=76.14;MQ0=0;MQRankSum=-0.442;QD=37.22;ReadPosRankSum=3.356;VQSLOD=3.5173;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:36.08:0,36,401	0/0:11,0:11:30.04:0,30,315	0/0:15,0:15:38.98:0,39,433	0/0:3,0:3:6.01:0,6,67	0/0:30,0:30:87.21:0,87,957	0/0:23,0:23:57.09:0,57,622	0/0:16,0:16:45.11:0,45,501	0/0:36,0:36:99:0,99,1047	0/0:10,0:10:30.08:0,30,334	0/0:23,0:23:63.17:0,63,702	0/0:18,0:18:51.11:0,51,559	0/0:21,0:21:54.12:0,54,602	0/0:16,0:16:48.11:0,48,526	0/0:14,0:14:39.07:0,39,422	0/0:16,0:16:42.09:0,42,459	0/0:18,0:19:50.86:0,51,547	0/0:15,0:15:42.11:0,42,468	0/0:2,0:2:6.02:0,6,67	0/0:17,0:17:42.10:0,42,468	0/0:23,0:23:60.14:0,60,669	0/0:4,0:4:12.03:0,12,134	0/0:14,0:14:30.05:0,30,324	0/0:27,0:27:63.12:0,63,684	0/0:7,0:7:15.02:0,15,156	0/0:22,0:22:57.12:0,57,618	1/1:2,25:30:83.23:1230,83,0	1/1:1,23:26:60.20:952,60,0	1/1:0,7:8:23.57:342,24,0
chr10	23604899	.	T	TA	8592.24	PASS	AB=0.596;AC=32;AF=0.571;AN=56;BaseQRankSum=-12.676;DP=565;FS=7.728;HRun=10;HaplotypeScore=62.6998;InbreedingCoeff=0.7447;MQ=66.64;MQ0=1;MQRankSum=2.243;QD=23.16;ReadPosRankSum=1.432;VQSLOD=5.7022;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:6,17:24:8.65:440,0,9	0/1:3,5:8:6.59:142,0,7	0/0:18,1:19:6.40:0,6,237	0/0:16,0:15:11.99:0,12,182	1/1:2,25:27:66.02:665,66,0	1/1:4,15:19:39.10:416,39,0	1/1:1,8:9:21.05:224,21,0	1/1:7,28:35:79.82:812,80,0	1/1:0,20:20:54.14:575,54,0	1/1:3,28:31:84.19:884,84,0	1/1:6,25:31:66.17:702,66,0	1/1:0,18:18:48.12:512,48,0	1/1:1,17:18:45.11:480,45,0	1/1:4,21:25:45.11:480,45,0	1/1:2,17:19:42.11:448,42,0	0/1:4,17:21:14.40:446,0,14	0/0:23,0:24:61.94:0,62,495	0/0:13,0:13:23.95:0,24,197	0/0:17,0:17:50.93:0,51,415	0/0:22,0:22:59.87:0,60,485	0/0:10,0:10:26.96:0,27,222	1/1:1,18:19:48.12:512,48,0	1/1:0,18:18:33.03:340,33,0	0/1:5,7:12:0.53:200,0,1	1/1:3,14:17:27.39:315,27,0	0/0:32,0:32:73.66:0,74,596	0/0:22,0:22:62.86:0,63,508	0/0:18,0:18:35.93:0,36,295
chr10	23605583	.	TA	T	6083.22	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=14.738;DP=698;FS=15.806;HRun=5;HaplotypeScore=66.2863;InbreedingCoeff=0.9995;MQ=58.37;MQ0=3;MQRankSum=-0.663;QD=30.11;ReadPosRankSum=3.126;VQSLOD=3.7802;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:45.62:0,46,616	0/0:14,0:14:39.12:0,39,517	0/0:20,0:10:27.06:0,27,349	0/0:19,0:15:39.09:0,39,484	0/0:40,0:40:99:0,111,1499	0/0:24,0:24:69.21:0,69,915	0/0:13,0:13:36.09:0,36,472	0/0:44,0:44:99:0,105,1356	0/0:25,0:25:75.25:0,75,1024	0/0:37,0:37:99:0,105,1408	0/0:22,0:22:57.19:0,57,779	0/0:24,0:24:72.24:0,72,984	0/0:23,0:23:69.23:0,69,943	0/0:31,0:31:87.29:0,87,1190	0/0:21,0:21:54.18:0,54,739	0/0:23,0:23:66.22:0,66,902	1/1:3,22:25:63.18:714,63,0	1/1:2,35:37:99:1157,102,0	1/1:2,20:21:57.16:646,57,0	1/1:1,36:37:99:1157,102,0	1/1:2,11:13:30.08:340,30,0	0/0:19,0:19:54.18:0,54,739	0/0:25,0:25:72.23:0,72,970	0/0:28,0:28:81.27:0,81,1108	0/0:25,0:25:75.24:0,75,1011	1/1:2,22:24:28.14:707,28,0	1/1:3,29:32:87.25:987,87,0	1/1:1,11:12:33.09:374,33,0
chr10	23611128	.	A	AAAAAG	9723.07	PASS	AB=1.000;AC=35;AF=0.625;AN=56;BaseQRankSum=-11.470;DP=568;FS=8.042;HRun=0;HaplotypeScore=124.2699;InbreedingCoeff=0.7982;MQ=65.40;MQ0=3;MQRankSum=4.921;QD=27.94;ReadPosRankSum=-3.027;VQSLOD=3.6650;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:18:4.56:0,5,39	1/1:6,6:13:18.06:501,18,0	0/1:19,0:11:4.92:22,0,5	0/0:45,0:15:3.40:0,3,28	1/1:15,20:35:57.19:1416,57,0	1/1:10,11:20:12.04:334,12,0	1/1:5,1:7:3.01:83,3,0	1/1:28,0:29:18.04:212,18,0	1/1:5,8:13:15.05:417,15,0	1/1:6,10:16:30.10:782,30,0	1/1:17,19:38:23.76:1248,24,0	1/1:8,5:13:12.04:334,12,0	1/1:5,8:14:18.06:500,18,0	1/1:11,7:20:9.03:251,9,0	1/1:5,12:19:27.09:737,27,0	1/1:3,5:10:9.03:251,9,0	0/0:26,0:26:36.09:0,36,407	0/0:13,0:13:8.51:0,9,79	0/0:20,0:19:33.09:0,33,374	0/0:38,0:38:59.36:0,59,649	0/0:3,0:3:9.03:0,9,105	1/1:12,7:19:21.07:488,21,0	1/1:8,13:22:24.08:668,24,0	1/1:2,10:12:12.04:334,12,0	1/1:11,17:28:42.14:1143,42,0	0/0:17,0:17:28.09:0,28,408	0/0:33,0:33:6.70:0,7,274	0/0:7,0:7:12.03:0,12,136
chr10	23611135	.	AAAG	A	4873.55	PASS	AB=1.000;AC=18;AF=0.321;AN=56;BaseQRankSum=5.931;DP=586;FS=10.865;HRun=0;HaplotypeScore=123.8829;InbreedingCoeff=0.7897;MQ=64.05;MQ0=5;MQRankSum=-6.021;QD=21.10;ReadPosRankSum=3.787;VQSLOD=4.2213;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:18,0:18:9.08:9,0,231	0/0:12,0:12:33.10:0,33,526	0/0:19,0:11:10.59:0,11,112	0/1:54,0:16:30.87:31,0,159	0/0:35,0:35:99:0,105,1764	0/0:19,0:18:36.04:0,36,477	0/0:10,0:10:27.09:0,27,439	0/0:29,0:29:87.28:0,87,1390	0/0:14,0:14:30.10:0,30,492	0/0:17,0:17:51.17:0,51,913	0/0:39,0:39:99:0,115,1947	0/0:13,0:13:36.11:0,36,526	0/0:15,0:15:33.10:0,33,556	0/0:23,0:23:51.16:0,51,767	0/0:19,0:19:39.13:0,39,686	0/0:10,0:10:18.06:0,18,315	1/1:0,26:26:51.17:861,51,0	1/1:2,12:14:24.08:396,24,0	1/1:5,14:18:2.58:660,3,0	1/1:0,38:38:99:1729,108,0	1/1:0,4:4:9.03:153,9,0	0/0:18,0:18:48.16:0,48,721	0/0:22,0:22:53.65:0,54,786	0/0:13,0:13:21.07:0,21,368	0/0:27,0:27:72.24:0,72,1146	1/1:0,0:19:43.65:481,44,0	1/1:3,0:31:44.98:432,45,0	1/1:0,0:8:12.03:122,12,0
chr10	23612389	.	ATGTGTATATGT	A	3747.17	PASS	AB=0.649;AC=5;AF=0.089;AN=56;BaseQRankSum=5.271;DP=558;FS=3.786;HRun=0;HaplotypeScore=239.8417;InbreedingCoeff=0.7457;MQ=79.06;MQ0=1;MQRankSum=-9.702;QD=56.78;ReadPosRankSum=2.016;VQSLOD=3.4997;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:81.23:0,81,3702	0/0:8,0:8:24.08:0,24,1095	0/0:26,0:26:47.58:0,48,2242	0/0:19,0:19:45.15:0,45,2086	0/0:26,0:26:69.24:0,69,2719	0/0:17,0:17:39.13:0,39,1806	0/0:23,0:23:69.24:0,69,3134	0/0:36,0:36:78.25:0,78,3267	0/0:20,0:20:48.16:0,48,2281	0/0:19,0:19:45.15:0,45,1987	0/0:32,0:32:87.30:0,87,4105	0/0:16,0:16:45.15:0,45,2112	0/0:14,0:14:36.06:0,36,1743	0/0:25,0:25:66.23:0,66,3072	0/0:25,0:25:66.18:0,66,3030	0/0:12,0:12:18.03:0,18,855	0/0:18,0:18:51.13:0,51,2148	0/0:16,0:16:24.06:0,24,1091	0/0:20,0:20:51.16:0,51,2153	0/0:11,0:11:27.09:0,27,1255	0/0:18,0:18:48.16:0,48,2238	0/0:12,0:12:30.07:0,30,1312	0/0:12,0:12:30.10:0,30,1428	0/0:9,0:9:27.09:0,27,1285	0/0:27,0:27:66.20:0,66,3063	0/1:11,13:23:61.91:1356,0,62	1/1:3,34:37:66.23:2241,66,0	1/1:5,0:5:9.03:150,9,0
chr10	23612510	.	C	CT	18255.63	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-5.993;DP=535;FS=6.834;HRun=1;HaplotypeScore=73.4671;InbreedingCoeff=0.9889;MQ=81.57;MQ0=0;MQRankSum=-7.437;QD=40.03;ReadPosRankSum=2.648;VQSLOD=5.5572;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:84.27:0,84,1088	1/1:0,11:11:27.09:405,27,0	0/0:25,0:25:75.17:0,75,928	0/0:25,0:25:65.36:0,65,857	1/1:0,16:16:48.16:719,48,0	1/1:0,21:21:63.21:944,63,0	1/1:0,22:22:54.18:809,54,0	1/1:2,23:25:72.22:1041,72,0	1/1:0,13:14:36.12:532,36,0	1/1:3,13:16:39.13:585,39,0	1/1:0,18:18:51.04:711,51,0	1/1:0,20:20:54.11:782,54,0	1/1:0,22:23:66.22:979,66,0	1/1:0,20:20:42.14:629,42,0	1/1:0,23:23:63.21:944,63,0	1/1:0,18:18:45.15:674,45,0	1/1:0,23:23:63.21:944,63,0	1/1:0,7:7:21.07:315,21,0	1/1:0,26:26:78.01:1062,78,0	1/1:0,17:17:51.17:764,51,0	1/1:1,21:22:57.19:854,57,0	1/1:0,7:7:18.06:270,18,0	1/1:0,11:11:24.08:359,24,0	1/1:0,21:21:57.19:854,57,0	1/1:1,19:20:48.16:719,48,0	1/1:0,20:20:60.18:876,60,0	1/1:1,29:30:84.28:1258,84,0	1/1:0,5:5:15.05:225,15,0
chr10	23613742	.	ATT	A	14460.86	PASS	AB=0.500;AC=47;AF=0.839;AN=56;BaseQRankSum=-4.477;DP=574;FS=10.441;HRun=9;HaplotypeScore=92.7504;InbreedingCoeff=0.8927;MQ=81.64;MQ0=1;MQRankSum=-4.920;QD=29.75;ReadPosRankSum=2.940;VQSLOD=4.0966;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,14:15:36.11:419,36,0	1/1:1,7:8:21.06:245,21,0	0/0:17,0:18:35.58:0,36,492	0/0:15,0:15:30.10:0,30,469	1/1:1,35:36:99:1188,102,0	1/1:3,21:24:60.17:699,60,0	1/1:3,20:23:54.15:629,54,0	1/1:4,34:38:99:1156,102,0	1/1:1,12:13:33.10:384,33,0	1/1:0,31:31:87.23:992,87,0	1/1:1,27:28:81.24:944,81,0	1/1:2,15:17:36.10:419,36,0	1/1:1,20:21:60.18:699,60,0	1/1:0,16:16:42.12:489,42,0	1/1:1,17:18:45.13:524,45,0	1/1:1,17:18:51.15:594,51,0	1/1:0,16:16:45.13:524,45,0	1/1:0,9:9:27.04:299,27,0	1/1:3,15:18:45.12:510,45,0	1/1:1,39:39:99:1188,102,0	1/1:2,13:15:33.10:384,33,0	1/1:1,21:22:57.16:664,57,0	1/1:1,18:19:54.16:629,54,0	1/1:0,5:5:12.04:140,12,0	1/1:2,22:24:63.18:734,63,0	0/0:2,1:21:16.30:0,16,153	0/0:6,0:34:73.25:0,73,285	0/1:0,1:12:4.50:4,0,66
chr10	23614344	.	T	TTC	11588.65	PASS	AB=0.870;AC=45;AF=0.804;AN=56;BaseQRankSum=5.795;DP=520;FS=1.679;HRun=0;HaplotypeScore=131.1738;InbreedingCoeff=0.6860;MQ=74.58;MQ0=5;MQRankSum=-4.542;QD=28.54;ReadPosRankSum=0.065;VQSLOD=6.0304;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,18:25:30.18:628,30,0	1/1:1,6:7:12.04:198,12,0	0/0:32,0:30:39.84:0,40,669	0/0:45,0:31:54.12:0,54,655	1/1:2,13:14:27.09:446,27,0	1/1:5,10:15:21.07:332,21,0	1/1:2,14:16:39.13:611,39,0	1/1:6,31:37:93.30:1491,93,0	1/1:2,11:13:27.09:447,27,0	1/1:16,2:19:35.97:539,36,0	1/1:15,2:17:24.08:392,24,0	1/1:1,18:20:54.18:892,54,0	1/1:3,7:10:24.08:382,24,0	1/1:4,10:14:24.08:395,24,0	1/1:1,10:11:20.42:266,20,0	1/1:2,14:16:33.10:524,33,0	1/1:14,0:14:9.03:147,9,0	0/1:7,0:5:4.57:36,0,5	1/1:21,0:21:41.86:592,42,0	1/1:28,0:28:66.23:1077,66,0	1/1:10,0:10:12.04:172,12,0	0/1:5,9:14:11.49:368,0,11	1/1:4,15:17:33.11:541,33,0	1/1:2,13:16:27.09:417,27,0	1/1:6,19:23:45.13:690,45,0	0/1:17,0:17:6.64:7,0,439	0/0:30,0:30:52.41:0,52,652	0/0:7,0:7:15.05:0,15,191
chr10	23614354	.	CTGTTTCTCTGTCTCTA	C	14464.42	PASS	AB=0.792;AC=46;AF=0.821;AN=56;BaseQRankSum=0.931;DP=524;FS=4.381;HRun=0;HaplotypeScore=215.1879;InbreedingCoeff=0.6786;MQ=68.44;MQ0=6;MQRankSum=-3.737;QD=36.71;ReadPosRankSum=0.539;VQSLOD=3.8425;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:22,1:23:34.62:708,35,0	1/1:7,0:7:12.04:217,12,0	0/0:33,0:27:47.98:0,48,2222	0/0:62,0:39:63.62:0,64,2220	1/1:15,0:14:26.85:549,27,0	1/1:13,0:13:20.19:331,20,0	1/1:19,0:19:38.12:589,38,0	1/1:33,0:33:93.10:1540,93,0	1/1:13,0:13:25.56:553,26,0	1/1:4,14:18:28.45:780,28,0	1/1:2,16:18:24.06:344,24,0	1/1:20,0:20:54.02:1143,54,0	1/1:11,0:11:22.27:698,22,0	1/1:13,0:13:13.39:565,13,0	1/1:13,0:13:14.19:266,14,0	1/1:16,0:16:30.02:670,30,0	1/1:1,11:12:9.03:289,9,0	0/1:2,5:5:35.51:114,0,36	1/1:2,20:22:60.03:1317,60,0	1/1:0,28:28:66.23:1266,66,0	1/1:0,11:11:12.04:170,12,0	1/1:11,0:11:26.66:499,27,0	1/1:19,0:17:32.26:639,32,0	1/1:16,0:16:23.28:443,23,0	1/1:22,0:20:44.18:763,44,0	0/1:14,0:14:10.70:11,0,994	0/0:27,0:27:2.63:0,3,1030	0/0:5,0:5:15.05:0,15,353
chr10	23614362	.	CTG	C	283.25	PASS	AB=0.940;AC=13;AF=0.232;AN=56;BaseQRankSum=4.287;DP=507;FS=9.915;HRun=0;HaplotypeScore=172.2129;InbreedingCoeff=0.4991;MQ=61.03;MQ0=8;MQRankSum=-4.728;QD=2.11;ReadPosRankSum=-1.729;VQSLOD=1.8846;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:22:1.56:2,0,80	0/0:5,0:5:5.85:0,6,34	0/0:39,0:25:56.11:0,56,994	0/0:72,1:37:44.85:0,45,1050	0/0:13,1:13:11.12:0,11,111	0/0:9,0:8:0:0,0,0	0/0:16,0:16:11.48:0,11,110	0/0:25,1:26:67.40:0,67,698	0/0:11,0:11:20.87:0,21,187	0/0:18,0:18:0.23:0,0,175	0/0:18,0:18:5.99:0,6,49	0/0:19,1:19:34.12:0,34,268	0/0:11,0:11:12.95:0,13,184	0/0:11,0:11:15.18:0,15,104	0/0:11,0:11:8.70:0,9,75	0/0:14,0:14:24.82:0,25,208	1/1:12,0:12:5.88:36,6,0	1/1:6,1:5:6.02:72,6,0	1/1:20,0:20:32.55:252,33,0	1/1:28,0:28:0.73:28,1,0	1/1:11,0:11:4.87:17,5,0	0/1:11,2:13:18.27:18,0,130	0/0:18,0:16:14.94:0,15,123	0/0:15,0:15:14.99:0,15,127	0/1:19,1:18:5.41:5,0,111	0/0:12,0:12:36.12:0,36,694	0/0:25,0:25:44.97:0,45,756	0/0:5,0:4:12.04:0,12,213
chr10	23614398	.	CTCTCTCTCTCTCTCTCTCTG	C	1336.19	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=-0.115;DP=464;FS=28.795;HRun=0;HaplotypeScore=222.8394;InbreedingCoeff=-0.1566;MQ=39.99;MQ0=15;MQRankSum=0.434;QD=5.41;ReadPosRankSum=-3.679;VQSLOD=0.8910;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:23:1.62:2,0,92	0/0:4,0:4:1.91:0,2,52	0/0:17,0:3:2.68:0,3,11	0/0:44,0:9:7.27:0,7,74	0/1:18,0:18:19.84:20,0,26	0/1:15,0:14:52.98:53,0,133	0/0:13,0:12:6.34:0,6,39	0/0:31,0:30:79.64:0,80,689	0/1:11,0:11:74.86:75,0,109	0/0:20,0:19:31.99:0,32,389	0/1:19,0:18:23.78:24,0,78	0/1:15,0:14:12.80:13,0,202	0/1:13,0:12:65.25:65,0,143	0/0:15,0:13:9.99:0,10,104	0/1:13,0:13:20.17:20,0,129	0/1:10,0:10:1:1,0,140	0/1:16,0:14:34.76:35,0,41	0/0:7,0:6:16.99:0,17,196	0/1:23,0:20:25.82:26,0,433	0/0:28,0:28:3.01:0,3,53	1/1:10,0:10:2.94:18,3,0	0/1:15,0:15:35.84:36,0,94	0/0:19,0:19:9.03:0,9,161	0/0:12,0:12:7.58:0,8,103	0/0:7,0:7:3.01:0,3,49	1/1:18,0:17:24.44:704,24,0	1/1:1,19:20:3.25:324,3,0	0/1:6,0:5:10.73:75,0,11
chr10	23614416	.	CTGTCTGTCTGTCTCTG	C	6738.12	PASS	AB=0.849;AC=48;AF=0.857;AN=56;BaseQRankSum=-2.505;DP=282;FS=8.940;HRun=0;HaplotypeScore=97.9552;InbreedingCoeff=0.2715;MQ=40.04;MQ0=17;MQRankSum=-0.215;QD=28.67;ReadPosRankSum=0.900;VQSLOD=2.9575;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:11:15.05:404,15,0	1/1:1,0:1:3.01:40,3,0	0/1:14,0:4:3.39:3,0,208	0/0:45,0:7:15.12:0,15,303	1/1:1,12:13:6.02:143,6,0	1/1:11,0:11:26.95:548,27,0	1/1:7,0:6:2.99:103,3,0	1/1:20,0:19:46.25:559,46,0	1/1:7,0:7:15.52:395,16,0	1/1:8,0:7:17.77:326,18,0	1/1:10,0:10:15.52:376,16,0	1/1:8,0:7:18.06:485,18,0	1/1:7,0:7:21.07:476,21,0	1/1:11,0:9:15.05:347,15,0	1/1:6,0:6:18.06:441,18,0	1/1:3,0:4:8.70:184,9,0	1/1:11,0:9:12.04:312,12,0	1/1:0,0:1:3.01:55,3,0	1/1:2,7:7:21.07:504,21,0	0/1:2,8:10:0:0,0,0	1/1:1,0:1:3.01:72,3,0	1/1:11,0:11:18.05:523,18,0	1/1:8,0:8:6.48:69,6,0	1/1:6,0:6:2.40:99,2,0	1/1:2,0:2:3.01:100,3,0	0/1:13,0:16:55.25:55,0,499	0/1:19,0:19:21.75:120,0,22	0/0:2,0:2:1.25:0,1,36
chr10	23615187	.	G	GA	10694.61	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=3.124;DP=616;FS=24.958;HRun=1;HaplotypeScore=129.0495;InbreedingCoeff=0.9637;MQ=69.45;MQ0=1;MQRankSum=3.014;QD=26.67;ReadPosRankSum=1.844;VQSLOD=3.2335;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,15:16:33.11:423,33,0	1/1:1,6:7:18.06:222,18,0	1/1:5,0:4:3.84:10,4,0	0/0:26,1:24:8.21:0,8,78	1/1:3,27:30:58.69:740,59,0	1/1:4,19:23:41.63:560,42,0	1/1:1,6:7:18.06:231,18,0	1/1:7,35:42:99:1342,105,0	1/1:1,16:17:42.13:525,42,0	1/1:1,37:38:99:1350,110,0	1/1:2,35:37:87.51:1110,88,0	1/1:2,21:23:45.14:561,45,0	1/1:2,20:22:47.22:555,47,0	1/1:0,16:16:27.08:330,27,0	1/1:3,24:27:45.96:556,46,0	1/1:2,18:20:41.75:519,42,0	0/0:23,0:23:58.27:0,58,347	0/0:11,0:11:26.52:0,27,167	0/0:25,0:24:63.16:0,63,308	0/0:30,0:30:80.92:0,81,456	0/0:16,0:16:42.70:0,43,212	1/1:2,16:18:24.55:291,25,0	1/1:1,16:17:31.72:404,32,0	1/1:1,14:15:29.21:371,29,0	1/1:1,20:21:48.62:595,49,0	0/0:30,0:30:87.76:0,88,1217	0/0:24,0:24:54.07:0,54,706	0/0:27,0:27:60.04:0,60,819
chr10	23615822	.	CT	C	708.15	PASS	AC=34;AF=0.773;AN=44;BaseQRankSum=7.218;DP=137;FS=22.759;HRun=2;HaplotypeScore=27.3594;InbreedingCoeff=0.5053;MQ=134.76;MQ0=0;MQRankSum=-2.610;QD=27.24;ReadPosRankSum=-5.957;VQSLOD=0.4687;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:1,0:1:3.01:39,3,0	./.	0/0:28,0:28:79.63:0,80,1114	0/0:24,0:24:48.96:0,49,846	1/1:0,1:1:3.01:39,3,0	1/1:0,2:2:5.98:59,6,0	1/1:0,1:1:3.01:39,3,0	1/1:1,0:1:3.01:38,3,0	./.	1/1:0,2:2:6.02:78,6,0	1/1:0,2:2:6.02:78,6,0	1/1:1,0:1:3.01:38,3,0	1/1:0,1:1:3.01:39,3,0	1/1:0,2:2:3.01:39,3,0	./.	1/1:1,0:1:3.01:39,3,0	./.	./.	1/1:2,0:2:6:62,6,0	1/1:1,0:1:3.01:36,3,0	1/1:0,3:3:3.01:39,3,0	1/1:0,2:2:6.02:78,6,0	1/1:0,1:1:3.01:39,3,0	./.	1/1:1,1:2:6.02:77,6,0	0/0:31,1:30:48.34:0,48,1220	0/0:13,0:11:33.10:0,33,474	0/0:13,0:13:39.13:0,39,584
chr10	23616026	.	AGGGAGGGAGGGAGGGG	A	2383.25	PASS	AB=0.811;AC=42;AF=0.778;AN=54;BaseQRankSum=4.070;DP=190;FS=6.728;HRun=0;HaplotypeScore=74.1661;InbreedingCoeff=0.2151;MQ=23.82;MQ0=28;MQRankSum=-0.676;QD=16.44;ReadPosRankSum=1.884;VQSLOD=0.8761;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:6,0:6:0.89:2,1,0	1/1:3,1:4:6.02:204,6,0	0/0:20,0:3:9.02:0,9,221	0/0:21,0:6:17.93:0,18,433	0/1:3,2:4:0:0,0,0	1/1:3,1:3:5.85:35,6,0	0/1:4,0:3:32.78:61,0,33	1/1:11,0:7:12.01:229,12,0	1/1:1,1:3:1.59:133,2,0	1/1:6,2:6:18.03:534,18,0	0/1:2,2:4:0.22:0,0,0	1/1:3,1:4:8.05:193,8,0	1/1:2,1:3:8.95:217,9,0	0/1:4,2:7:58.18:197,0,58	1/1:2,3:5:8.70:52,9,0	1/1:3,0:3:3.01:83,3,0	1/1:7,0:5:8.28:85,8,0	0/1:7,0:4:48.68:49,0,226	1/1:6,0:2:6:69,6,0	1/1:3,0:2:1.55:4,2,0	./.	1/1:3,0:3:1.55:4,2,0	0/1:4,2:6:0.84:1,0,1	0/1:6,1:6:0.64:1,0,1	1/1:3,1:4:5.46:25,5,0	1/1:6,0:3:6.02:140,6,0	0/1:7,2:7:19.67:20,0,34	1/1:9,0:6:7.58:178,8,0
chr10	23616030	.	AGGGAGGGAGGGG	A	2170.21	PASS	AB=0.981;AC=44;AF=0.815;AN=54;BaseQRankSum=3.633;DP=181;FS=4.919;HRun=0;HaplotypeScore=69.1314;InbreedingCoeff=0.2398;MQ=24.00;MQ0=27;MQRankSum=-1.702;QD=15.50;ReadPosRankSum=2.158;VQSLOD=1.1518;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:5,0:5:0.47:1,0,0	1/1:4,0:4:6.02:160,6,0	0/0:15,0:3:9:0,9,171	0/0:21,0:6:15.02:0,15,302	0/1:3,0:3:0:0,0,0	1/1:3,3:3:5.87:35,6,0	0/1:5,0:4:14.91:60,0,15	1/1:9,0:6:9.03:138,9,0	1/1:3,1:3:3.34:111,3,0	1/1:7,0:5:15.05:394,15,0	0/1:4,0:4:0.25:0,0,0	1/1:4,0:4:7.74:142,8,0	1/1:3,1:3:8.95:174,9,0	0/1:7,1:7:60.53:156,0,61	1/1:6,0:5:8.80:53,9,0	1/1:2,1:3:6.01:97,6,0	1/1:8,0:5:8.67:153,9,0	0/1:7,0:4:33.02:33,0,141	1/1:4,0:1:3.01:66,3,0	1/1:4,0:4:3.01:32,3,0	./.	1/1:3,0:3:1.25:3,1,0	1/1:5,0:5:0.24:2,0,0	0/1:7,0:6:0.40:0,0,0	1/1:4,0:4:2.96:19,3,0	1/1:6,0:3:6.02:143,6,0	1/1:8,0:7:2.01:85,2,0	1/1:9,0:6:9.03:241,9,0
chr10	23616032	.	GGAGGGAGGGGGA	G	1639.90	PASS	AB=1.000;AC=39;AF=0.722;AN=54;BaseQRankSum=2.782;DP=180;FS=3.575;HRun=0;HaplotypeScore=71.2339;InbreedingCoeff=0.3247;MQ=23.90;MQ0=30;MQRankSum=-0.515;QD=12.71;ReadPosRankSum=3.079;VQSLOD=1.3369;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:4:0.47:1,0,0	1/1:4,0:4:5.55:126,6,0	0/0:14,0:2:5.91:0,6,101	0/0:17,0:4:12.02:0,12,192	0/0:3,0:3:2.97:0,3,20	0/0:6,0:3:0:0,0,1	1/1:6,0:5:5.78:86,6,0	1/1:9,0:6:8.96:69,9,0	1/1:5,0:3:0.77:78,1,0	1/1:7,0:5:15.05:307,15,0	0/1:4,0:4:0.25:0,0,0	1/1:4,0:4:7.38:108,7,0	1/1:4,0:3:5.87:124,6,0	0/1:8,0:7:33.56:108,0,34	0/0:6,0:5:1.36:0,1,3	1/1:3,0:3:6.01:80,6,0	1/1:8,0:5:8.87:114,9,0	0/1:7,0:4:16.38:16,0,128	1/1:4,0:1:3.01:46,3,0	1/1:5,0:5:2.47:13,2,0	./.	1/1:3,0:3:1.25:3,1,0	1/1:5,0:5:0.41:2,0,0	0/1:8,0:6:0.15:0,0,0	0/1:4,0:4:0.13:0,0,0	1/1:5,3:3:6.02:108,6,0	1/1:9,0:7:8.65:128,9,0	1/1:5,5:6:9.03:249,9,0
chr10	23616034	.	AGGGAGGGG	A	1787.05	PASS	AB=1.000;AC=45;AF=0.833;AN=54;BaseQRankSum=3.665;DP=180;FS=0.000;HRun=0;HaplotypeScore=66.2874;InbreedingCoeff=0.2999;MQ=24.16;MQ0=30;MQRankSum=0.392;QD=12.50;ReadPosRankSum=0.775;VQSLOD=1.3701;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:3,1:4:0.47:1,0,0	1/1:4,0:4:6.02:114,6,0	0/0:14,0:2:5.91:0,6,101	0/0:17,0:4:12.02:0,12,192	0/1:3,0:3:0:0,0,0	1/1:6,0:3:5.87:35,6,0	1/1:5,0:4:5.95:69,6,0	1/1:9,0:6:8.96:69,9,0	1/1:5,0:3:4.53:83,5,0	1/1:7,0:5:15.05:292,15,0	0/1:4,0:4:0.20:0,0,0	1/1:4,0:4:7.38:103,7,0	1/1:4,0:3:8.94:128,9,0	0/1:8,0:7:29.22:105,0,29	1/1:6,0:5:8.80:53,9,0	1/1:3,0:3:5.05:60,5,0	1/1:7,1:5:8.92:195,9,0	0/1:7,0:4:35.40:35,0,93	1/1:3,0:1:3.01:63,3,0	1/1:3,2:5:2.81:29,3,0	./.	1/1:3,0:3:1.25:3,1,0	1/1:5,0:5:0.94:2,1,0	0/1:8,0:6:0.11:0,0,0	1/1:4,0:4:2.96:19,3,0	1/1:6,2:3:6.02:125,6,0	1/1:9,1:8:13.88:137,14,0	1/1:10,0:6:9.03:188,9,0
chr10	23616098	.	A	AAC	10201.02	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=8.271;DP=388;FS=11.646;HRun=0;HaplotypeScore=145.2870;InbreedingCoeff=0.9479;MQ=53.25;MQ0=12;MQRankSum=-6.610;QD=32.18;ReadPosRankSum=-2.371;VQSLOD=5.5526;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:14:39.02:517,39,0	1/1:4,1:5:15.05:203,15,0	0/0:17,0:9:24.04:0,24,355	0/0:9,0:7:18:0,18,235	1/1:9,6:15:36.01:530,36,0	1/1:20,3:21:42.67:722,43,0	1/1:15,2:14:32.81:402,33,0	1/1:24,0:22:60.02:759,60,0	1/1:11,4:14:40.16:561,40,0	1/1:11,4:16:44.94:653,45,0	1/1:11,5:16:39.55:480,40,0	1/1:4,5:10:26.11:284,26,0	1/1:7,5:11:33.04:451,33,0	1/1:14,6:20:53.41:692,53,0	1/1:12,1:12:36.12:514,36,0	1/1:10,1:11:33.11:478,33,0	1/1:12,0:11:27.55:343,28,0	1/1:4,0:4:6.02:85,6,0	1/1:7,1:8:17.63:238,18,0	1/1:18,1:19:39.05:514,39,0	1/1:5,0:5:11.94:145,12,0	1/1:10,0:10:24.07:337,24,0	1/1:14,4:20:42.56:558,43,0	1/1:4,2:6:9.50:122,10,0	1/1:16,3:19:46.31:610,46,0	0/0:21,0:18:51.17:0,51,793	0/0:14,0:13:33.02:0,33,423	0/0:10,0:10:27.09:0,27,414
chr10	23616103	.	C	CCA	11794.18	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=8.010;DP=411;FS=12.807;HRun=0;HaplotypeScore=142.5443;InbreedingCoeff=0.9357;MQ=57.68;MQ0=5;MQRankSum=-7.041;QD=35.10;ReadPosRankSum=-0.165;VQSLOD=6.1570;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,14:17:35.33:572,35,0	1/1:1,5:6:12.04:205,12,0	0/0:19,0:11:33.11:0,33,426	0/0:9,0:7:21.07:0,21,274	1/1:4,13:17:33.11:565,33,0	1/1:4,16:21:48.16:813,48,0	1/1:4,9:13:27.09:460,27,0	1/1:8,21:28:57.19:922,57,0	1/1:3,13:16:36.12:613,36,0	1/1:5,12:17:33.11:563,33,0	1/1:3,15:18:36.07:615,36,0	1/1:2,9:12:24.08:389,24,0	1/1:3,10:13:27.06:428,27,0	1/1:4,16:20:48.16:797,48,0	1/1:4,10:13:30.10:513,30,0	1/1:1,11:12:30.10:511,30,0	1/1:2,9:11:27.07:447,27,0	1/1:0,5:5:6.02:103,6,0	1/1:2,8:10:24.08:392,24,0	1/1:2,15:18:42.14:714,42,0	1/1:1,6:7:12.04:205,12,0	1/1:1,11:12:24.08:410,24,0	1/1:8,13:21:39.12:639,39,0	1/1:2,4:6:6.02:102,6,0	1/1:4,16:20:48.16:818,48,0	0/0:23,0:21:54.17:0,54,705	0/0:14,0:13:33.11:0,33,432	0/0:10,0:10:27.09:0,27,354
chr10	23616383	.	AT	A	15644.50	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=14.621;DP=555;FS=10.904;HRun=2;HaplotypeScore=181.4330;InbreedingCoeff=0.9808;MQ=86.03;MQ0=0;MQRankSum=-7.004;QD=35.31;ReadPosRankSum=3.121;VQSLOD=2.6503;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,22:22:60.20:778,60,0	1/1:0,4:4:9.03:117,9,0	0/0:28,0:28:58.11:0,58,948	0/0:16,0:16:48.09:0,48,655	1/1:1,19:20:57.19:739,57,0	1/1:0,30:30:84.27:1090,84,0	1/1:3,14:17:42:502,42,0	1/1:4,30:34:84.27:1089,84,0	1/1:0,16:16:48.11:604,48,0	1/1:1,27:28:81.26:1043,81,0	1/1:2,15:17:42.09:525,42,0	1/1:0,22:22:63.20:817,63,0	1/1:1,16:17:51.16:657,51,0	1/1:0,24:24:72.23:934,72,0	1/1:0,29:29:87.24:1109,87,0	1/1:0,29:29:84.27:1090,84,0	1/1:0,22:22:60.20:778,60,0	1/1:0,5:5:15.05:191,15,0	1/1:0,19:19:54.18:701,54,0	1/1:0,17:17:42.14:545,42,0	1/1:0,11:11:17.83:233,18,0	1/1:0,13:13:36.07:448,36,0	1/1:0,14:14:36.01:426,36,0	1/1:1,13:14:39.13:506,39,0	1/1:0,19:19:57.14:720,57,0	0/0:22,1:23:30.36:0,30,950	0/0:31,0:30:93.32:0,93,1393	0/0:14,0:14:39.13:0,39,584
chr10	23616594	.	TG	T	22371.32	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=2.080;DP=692;FS=8.231;HRun=2;HaplotypeScore=195.3033;InbreedingCoeff=0.9096;MQ=88.27;MQ0=0;MQRankSum=-10.965;QD=34.85;ReadPosRankSum=7.223;VQSLOD=2.8690;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:0,35:35:99:1264,102,0	1/1:1,12:13:36.11:441,36,0	0/0:27,0:27:75.20:0,75,1017	0/0:23,0:23:51.08:0,51,642	1/1:0,30:30:81.25:1004,81,0	1/1:0,33:33:93.29:1152,93,0	1/1:4,22:26:60.19:744,60,0	1/1:1,30:31:90.28:1114,90,0	1/1:0,18:18:54.17:666,54,0	1/1:0,35:35:99:1282,105,0	1/1:0,22:22:63.11:746,63,0	1/1:0,19:19:54.17:669,54,0	1/1:1,18:19:51.16:632,51,0	1/1:1,30:31:84.26:1041,84,0	1/1:2,33:35:96.30:1186,96,0	1/1:0,27:27:78.25:967,78,0	1/1:0,35:35:99:1261,102,0	1/1:0,1:1:3.01:37,3,0	1/1:2,18:20:54.17:669,54,0	1/1:0,30:30:87.23:1055,87,0	1/1:0,27:27:72.23:893,72,0	1/1:0,22:22:63.20:781,63,0	1/1:0,20:20:57.14:688,57,0	1/1:0,19:19:57.18:706,57,0	1/1:1,29:30:87.27:1078,87,0	1/1:0,24:24:72.23:932,72,0	1/1:0,35:35:90.29:1167,90,0	1/1:0,5:5:15.05:195,15,0
chr10	23616826	.	CA	C	19904.47	PASS	AB=0.917;AC=47;AF=0.839;AN=56;BaseQRankSum=13.748;DP=637;FS=0.389;HRun=1;HaplotypeScore=166.8678;InbreedingCoeff=0.8534;MQ=74.76;MQ0=0;MQRankSum=-5.990;QD=36.32;ReadPosRankSum=5.521;VQSLOD=4.1933;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,23:23:63.21:880,63,0	1/1:0,16:16:39.13:544,39,0	0/0:30,0:29:84.28:0,84,1326	0/0:19,0:19:53.95:0,54,704	1/1:0,25:25:66.02:846,66,0	1/1:0,21:21:60.20:837,60,0	1/1:0,12:12:33.11:461,33,0	1/1:3,31:34:99:1357,99,0	1/1:0,16:16:39.13:545,39,0	1/1:0,30:30:90.27:1207,90,0	1/1:0,16:16:36.08:480,36,0	1/1:0,28:28:75.25:1048,75,0	1/1:0,39:39:99:1424,102,0	1/1:0,27:27:72.24:1006,72,0	1/1:0,32:32:90.30:1258,90,0	1/1:0,21:21:63.21:881,63,0	1/1:0,15:15:42.14:587,42,0	1/1:0,9:9:24.08:331,24,0	1/1:0,22:22:63.17:820,63,0	1/1:0,27:27:78.23:1066,78,0	1/1:0,34:34:93.28:1300,93,0	1/1:0,15:15:39.60:543,40,0	1/1:0,24:24:60.20:833,60,0	1/1:0,21:21:63.21:880,63,0	1/1:0,19:19:54.18:752,54,0	0/1:20,2:22:17.49:17,0,840	0/0:37,0:37:99:0,108,1627	0/0:3,0:3:9.03:0,9,144
chr10	23617417	.	A	ACT	24886.20	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-13.280;DP=599;FS=6.476;HRun=0;HaplotypeScore=59.9052;InbreedingCoeff=0.9830;MQ=77.74;MQ0=3;MQRankSum=-0.580;QD=50.38;ReadPosRankSum=0.923;VQSLOD=5.6706;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,14:15:30.10:579,30,0	1/1:0,10:10:24.08:463,24,0	0/0:19,0:19:57.18:0,57,832	0/0:10,0:10:10.13:0,10,337	1/1:0,32:33:93.32:1794,93,0	1/1:0,17:18:48.16:925,48,0	1/1:0,12:13:33.11:637,33,0	1/1:2,31:34:96.30:1728,96,0	1/1:0,12:12:27.09:520,27,0	1/1:0,29:29:87.28:1615,87,0	1/1:0,27:27:81.28:1558,81,0	1/1:0,19:20:48.16:925,48,0	1/1:0,21:21:60.21:1158,60,0	1/1:0,25:26:69.24:1330,69,0	1/1:0,28:28:75.26:1447,75,0	1/1:0,21:21:63.22:1215,63,0	1/1:1,22:23:57.20:1100,57,0	1/1:0,12:11:17.92:347,18,0	1/1:1,16:18:51.16:949,51,0	1/1:1,30:32:87.30:1658,87,0	1/1:1,18:20:51.17:985,51,0	1/1:2,19:21:48.16:927,48,0	1/1:2,28:31:84.29:1576,84,0	1/1:0,10:10:27.09:521,27,0	1/1:1,17:18:48.16:927,48,0	0/0:24,1:25:17.49:0,17,1043	0/0:44,0:44:99:0,129,1925	0/0:7,0:7:21.07:0,21,320
chr10	23617945	.	A	ACT	22762.62	PASS	AB=0.950;AC=47;AF=0.839;AN=56;BaseQRankSum=13.985;DP=505;FS=1.447;HRun=0;HaplotypeScore=149.9368;InbreedingCoeff=0.8865;MQ=71.25;MQ0=0;MQRankSum=-10.748;QD=53.43;ReadPosRankSum=3.602;VQSLOD=4.9377;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,12:12:24.08:486,24,0	1/1:0,11:11:33.11:668,33,0	0/0:19,0:19:51.17:0,51,794	0/0:10,0:12:20.54:0,21,300	1/1:2,24:26:75.26:1500,75,0	1/1:3,27:31:81.28:1642,81,0	1/1:1,11:12:36.12:721,36,0	1/1:11,23:35:99:2023,102,0	1/1:0,14:14:42.14:851,42,0	1/1:3,19:22:54.19:1095,54,0	1/1:0,15:15:45.15:910,45,0	1/1:4,12:16:42.14:844,42,0	1/1:2,21:23:66.23:1321,66,0	1/1:1,23:26:72.20:1417,72,0	1/1:2,17:19:54.19:1088,54,0	1/1:1,24:25:75.26:1513,75,0	1/1:3,7:11:27.09:537,27,0	1/1:1,2:3:9.03:182,9,0	1/1:4,12:17:47.58:934,48,0	1/1:1,21:22:63.22:1269,63,0	1/1:0,5:5:12.04:242,12,0	1/1:1,10:11:30.10:599,30,0	1/1:0,23:23:69.24:1397,69,0	1/1:1,8:9:21.07:425,21,0	1/1:2,17:19:54.19:1093,54,0	0/1:18,1:19:3.66:4,0,802	0/0:32,0:31:96.33:0,96,1566	0/0:16,0:16:48.16:0,48,783
chr10	23618324	.	CTG	C	1129.41	PASS	AB=0.863;AC=28;AF=0.538;AN=52;BaseQRankSum=-1.151;DP=522;FS=5.277;HRun=0;HaplotypeScore=100.6546;InbreedingCoeff=0.4552;MQ=54.30;MQ0=25;MQRankSum=0.552;QD=4.01;ReadPosRankSum=2.017;VQSLOD=1.7967;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:19:3.48:0,3,34	1/1:7,5:11:6.01:65,6,0	./.	./.	1/1:22,4:25:6.02:65,6,0	1/1:14,9:23:9.02:97,9,0	1/1:5,0:5:5.83:37,6,0	0/1:27,0:26:12.03:12,0,22	1/1:7,9:17:19.74:206,20,0	0/0:25,0:24:24.04:0,24,271	0/0:12,0:17:12.03:0,12,145	0/1:9,3:11:7.91:85,0,8	0/1:10,3:12:29.41:56,0,29	1/1:11,7:18:11.86:111,12,0	0/0:12,0:17:15:0,15,139	0/0:9,0:14:15.01:0,15,145	0/0:11,0:18:15.01:0,15,149	0/0:15,0:17:3.81:0,4,114	0/0:13,0:9:3.01:0,3,43	0/0:14,0:21:14.23:0,14,128	0/0:16,0:22:6.01:0,6,59	1/1:13,0:14:2.84:14,3,0	1/1:17,5:21:6.02:65,6,0	1/1:20,13:32:30.28:352,30,0	0/1:17,4:20:26.76:27,0,38	1/1:16,0:19:11.33:56,11,0	1/1:10,0:12:5.68:28,6,0	1/1:4,1:5:3.01:32,3,0
chr10	23619861	.	GT	G	290.91	PASS	AC=24;AF=0.923;AN=26;BaseQRankSum=-1.736;DP=28;FS=0.000;HRun=1;HaplotypeScore=13.3038;InbreedingCoeff=0.1309;MQ=61.67;MQ0=0;MQRankSum=1.273;QD=14.55;ReadPosRankSum=-1.273;VQSLOD=2.2673;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,0:3:7.84:85,8,0	1/1:1,0:1:2.98:22,3,0	1/1:7,0:2:1.55:4,2,0	0/0:7,0:4:3:0,3,46	./.	1/1:0,1:1:2.98:21,3,0	./.	1/1:1,0:1:3.01:42,3,0	./.	./.	1/1:1,0:1:3.01:41,3,0	1/1:0,1:1:3.01:33,3,0	1/1:1,0:1:2.99:23,3,0	./.	./.	1/1:1,0:1:1.55:4,2,0	./.	1/1:0,1:1:3.01:38,3,0	./.	1/1:0,1:1:3.01:33,3,0	./.	./.	./.	./.	./.	1/1:1,0:1:3:27,3,0	./.	./.
chr10	23620612	.	AC	A	4472.84	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=7.507;DP=680;FS=4.601;HRun=1;HaplotypeScore=63.9743;InbreedingCoeff=0.9960;MQ=81.48;MQ0=0;MQRankSum=1.813;QD=38.89;ReadPosRankSum=3.105;VQSLOD=5.6108;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,117,1560	0/0:13,0:13:36.09:0,36,482	0/0:21,1:21:63.17:0,63,827	0/0:20,0:20:53.79:0,54,636	0/0:41,0:41:99:0,123,1596	0/0:25,0:25:74.98:0,75,952	0/0:13,0:13:39.08:0,39,491	0/0:32,0:32:93.25:0,93,1200	0/0:21,0:21:63.14:0,63,852	0/0:18,0:18:54.14:0,54,705	0/0:27,0:27:81.01:0,81,1033	0/0:34,0:34:99:0,102,1382	0/0:31,0:31:93.09:0,93,1182	0/0:20,0:20:57.08:0,57,733	0/0:16,0:16:39.05:0,39,519	0/0:23,0:23:69.20:0,69,928	1/1:0,35:35:93.31:1295,93,0	1/1:0,16:16:42.14:586,42,0	1/1:0,24:24:72.21:984,72,0	1/1:0,30:30:90.23:1213,90,0	1/1:1,9:10:30.03:395,30,0	0/0:20,0:20:57.17:0,57,774	0/0:33,0:33:96.19:0,96,1257	0/0:16,0:16:48.12:0,48,646	0/0:40,0:40:99:0,120,1552	0/0:22,0:22:63.17:0,63,845	0/0:34,0:34:99:0,102,1291	0/0:5,0:5:14.96:0,15,165
chr10	23622366	.	T	TA	12833.19	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-1.000;DP=612;FS=0.000;HRun=8;HaplotypeScore=102.3428;InbreedingCoeff=0.9928;MQ=78.27;MQ0=0;MQRankSum=-2.313;QD=24.73;ReadPosRankSum=1.700;VQSLOD=4.7889;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,22:25:66.20:761,66,0	1/1:1,8:9:18.05:208,18,0	0/0:13,0:13:29.69:0,30,254	0/0:14,0:14:27:0,27,246	1/1:1,33:34:93.24:1059,93,0	1/1:0,21:21:51.15:588,51,0	1/1:3,7:10:18.05:208,18,0	1/1:8,31:39:90.26:1029,90,0	1/1:6,18:25:57.17:653,57,0	1/1:5,25:29:72.17:799,72,0	1/1:5,24:29:71.96:765,72,0	1/1:1,16:17:45.13:519,45,0	1/1:2,23:25:66.20:762,66,0	1/1:3,18:21:54.16:623,54,0	1/1:3,13:16:33.10:381,33,0	1/1:3,22:25:63.19:727,63,0	1/1:4,1:28:68.24:348,68,0	1/1:3,0:17:39.76:201,40,0	1/1:7,0:26:54.74:288,55,0	1/1:3,0:24:56.82:289,57,0	1/1:1,2:15:28.70:170,29,0	1/1:0,27:27:81.16:917,81,0	1/1:2,24:26:66.06:742,66,0	1/1:2,8:10:21.06:242,21,0	1/1:1,19:20:48.14:554,48,0	0/0:28,1:29:43.38:0,43,644	0/0:31,0:30:83.91:0,84,745	0/0:6,0:6:18.01:0,18,165
chr10	23622988	.	GA	G	14825.49	PASS	AB=0.600;AC=51;AF=0.911;AN=56;BaseQRankSum=2.332;DP=655;FS=58.939;HRun=8;HaplotypeScore=71.3211;InbreedingCoeff=0.7806;MQ=79.10;MQ0=0;MQRankSum=-7.743;QD=23.99;ReadPosRankSum=4.432;VQSLOD=0.7218;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,38:40:99:1072,111,0	1/1:1,14:10:27.04:261,27,0	0/0:14,0:14:39.09:0,39,453	0/0:22,0:23:48.14:0,48,575	1/1:1,27:28:66.09:637,66,0	1/1:5,22:27:63.10:608,63,0	1/1:2,22:24:60.09:579,60,0	1/1:4,25:29:72.08:684,72,0	1/1:0,18:18:45.07:434,45,0	1/1:2,28:29:84.13:810,84,0	1/1:1,22:20:54.08:521,54,0	1/1:1,21:22:63.10:608,63,0	1/1:2,21:23:57.09:550,57,0	1/1:1,19:20:57.09:549,57,0	1/1:2,22:24:63.10:608,63,0	1/1:0,23:23:54.08:521,54,0	1/1:1,12:13:36.06:348,36,0	1/1:3,12:15:36.06:348,36,0	1/1:4,13:17:39.06:376,39,0	1/1:1,25:20:54.08:521,54,0	1/1:1,20:21:51.08:493,51,0	1/1:2,17:19:48.07:463,48,0	1/1:1,22:21:60.10:579,60,0	1/1:1,27:28:78.12:753,78,0	1/1:4,28:29:72.10:694,72,0	1/1:3,30:33:90.12:861,90,0	1/1:2,28:30:72.11:695,72,0	0/1:5,10:15:24.05:251,0,24
chr10	23625501	.	A	AATAT	5289.23	PASS	AB=1.000;AC=39;AF=0.696;AN=56;BaseQRankSum=-6.231;DP=250;FS=0.000;HRun=0;HaplotypeScore=43.9020;InbreedingCoeff=0.5183;MQ=71.13;MQ0=2;MQRankSum=0.886;QD=29.06;ReadPosRankSum=-3.199;VQSLOD=3.8811;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,0:3:6.02:120,6,0	1/1:2,0:5:2.80:13,3,0	0/0:5,0:2:0.66:0,1,26	0/1:19,0:9:1.32:1,0,38	1/1:1,7:8:12.04:303,12,0	1/1:1,12:13:30.10:759,30,0	1/1:2,4:7:6.02:129,6,0	1/1:16,36:54:99:2185,119,0	1/1:0,6:6:12.04:303,12,0	1/1:2,5:7:15.04:303,15,0	1/1:7,1:8:12.04:217,12,0	1/1:1,3:4:6.02:152,6,0	1/1:3,1:4:6.02:149,6,0	1/1:1,3:5:5.81:89,6,0	1/1:1,3:5:6.02:152,6,0	1/1:0,1:1:3.01:76,3,0	0/0:12,0:12:36.10:0,36,587	0/0:11,0:12:27.08:0,27,442	0/0:17,0:17:39.12:0,39,643	0/0:8,0:8:18.05:0,18,279	0/0:5,0:5:15.02:0,15,194	1/1:1,0:2:2.58:50,3,0	1/1:3,0:4:3.01:53,3,0	1/1:2,0:2:3.01:48,3,0	1/1:2,3:5:6.02:152,6,0	0/1:9,0:9:9.03:30,0,9	0/1:11,0:11:7.59:8,0,28	0/0:9,0:9:9.76:0,10,34
chr10	23626339	.	G	GGAAA	8731.10	PASS	AB=0.523;AC=15;AF=0.268;AN=56;BaseQRankSum=-5.425;DP=574;FS=2.206;HRun=0;HaplotypeScore=89.1900;InbreedingCoeff=0.8672;MQ=89.57;MQ0=0;MQRankSum=-3.369;QD=55.97;ReadPosRankSum=0.412;VQSLOD=6.2406;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:69.18:0,69,1356	0/0:2,0:2:6.02:0,6,125	0/0:22,0:22:62.99:0,63,939	0/0:23,0:23:59.61:0,60,944	0/0:25,0:25:72.20:0,72,1386	0/0:26,0:26:78.26:0,78,1540	0/0:16,0:16:45.11:0,45,826	0/0:35,0:35:99:0,99,1780	0/0:19,0:19:57.10:0,57,1069	0/0:18,0:18:54.17:0,54,1039	0/0:16,0:16:48.14:0,48,923	0/0:17,0:17:51.17:0,51,1005	0/0:24,0:24:72.25:0,72,1471	0/0:26,0:26:72.16:0,72,1227	0/0:22,0:22:66.22:0,66,1340	0/0:18,0:18:48.11:0,48,891	1/1:1,13:16:24.08:692,24,0	1/1:2,12:17:27.06:655,27,0	1/1:0,22:28:84.17:1926,84,0	1/1:0,24:29:81.10:1852,81,0	1/1:0,5:5:12.04:333,12,0	0/0:21,0:21:63.15:0,63,1137	0/0:20,0:20:57.16:0,57,1111	0/0:19,0:19:57.18:0,57,1147	0/0:23,0:23:66.13:0,66,1290	0/1:2,15:23:7.76:1368,0,8	1/1:0,26:32:66.23:1819,66,0	1/1:0,4:5:3.01:87,3,0
chr10	23626781	.	C	CGTTA	12589.66	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-10.461;DP=605;FS=1.093;HRun=0;HaplotypeScore=142.7854;InbreedingCoeff=0.9978;MQ=80.24;MQ0=0;MQRankSum=-8.835;QD=76.30;ReadPosRankSum=1.044;VQSLOD=6.4765;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:66.23:0,66,1375	0/0:7,0:7:21.07:0,21,439	0/0:21,0:21:57.20:0,57,1159	0/0:12,0:12:25.27:0,25,376	0/0:28,0:28:84.27:0,84,1709	0/0:25,0:25:69.24:0,69,1395	0/0:17,0:17:48.16:0,48,1006	0/0:25,0:25:69.19:0,69,1369	0/0:21,0:20:47.90:0,48,1006	0/0:23,0:23:69.23:0,69,1395	0/0:30,0:30:90.29:0,90,1791	0/0:18,0:18:54.19:0,54,1131	0/0:20,0:20:60.21:0,60,1224	0/0:21,0:21:57.20:0,57,1178	0/0:25,0:25:75.26:0,75,1573	0/0:29,0:29:81.28:0,81,1697	1/1:4,16:20:54.18:1500,54,0	1/1:0,13:14:39.13:1079,39,0	1/1:4,10:17:48.12:1204,48,0	1/1:5,21:26:78.26:2059,78,0	1/1:2,15:19:42.14:1115,42,0	0/0:26,0:26:78.27:0,78,1601	0/0:23,0:23:69.24:0,69,1429	0/0:18,0:18:51.18:0,51,1065	0/0:26,0:26:75.26:0,75,1573	1/1:4,23:27:18.34:2133,18,0	1/1:3,25:29:87.30:2457,87,0	1/1:0,13:13:36.12:1042,36,0
chr10	23626842	.	C	CT	473.71	PASS	AB=0.963;AC=11;AF=0.196;AN=56;BaseQRankSum=-1.287;DP=596;FS=0.598;HRun=13;HaplotypeScore=132.9501;InbreedingCoeff=0.3442;MQ=67.15;MQ0=16;MQRankSum=-3.963;QD=2.96;ReadPosRankSum=-1.555;VQSLOD=0.7415;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,1:36:16.43:0,16,362	0/0:10,0:9:20.43:0,20,133	0/0:24,0:22:18.95:0,19,160	0/1:9,0:6:5.58:6,0,37	0/0:28,1:31:20.49:0,20,262	0/0:17,0:19:30.76:0,31,197	0/0:16,0:16:29.70:0,30,205	0/1:22,2:28:14.89:15,0,164	0/0:27,0:27:25.65:0,26,170	0/0:30,0:30:11.64:0,12,353	0/1:19,1:23:2.37:2,0,242	0/0:17,0:17:26.51:0,27,145	0/1:15,0:15:0.63:1,0,120	0/0:17,1:18:2.87:0,3,154	0/0:20,1:21:32.62:0,33,224	0/0:17,0:20:2.89:0,3,138	0/0:28,0:26:47.44:0,47,323	0/0:9,0:9:18.93:0,19,114	0/0:16,0:16:2.98:0,3,147	0/0:23,0:26:47.61:0,48,305	0/0:11,0:10:14.85:0,15,102	0/0:19,1:20:9.78:0,10,203	0/0:21,1:22:31.65:0,32,211	0/0:19,0:17:25.72:0,26,168	0/1:19,2:24:12.92:13,0,139	1/1:11,10:19:18.33:287,18,0	1/1:16,11:27:4.01:242,4,0	1/1:11,1:10:5.93:45,6,0
chr10	23626860	.	CT	C	7114.22	PASS	AB=0.833;AC=52;AF=0.929;AN=56;BaseQRankSum=-4.766;DP=551;FS=12.135;HRun=9;HaplotypeScore=75.2221;InbreedingCoeff=0.4853;MQ=54.40;MQ0=23;MQRankSum=1.586;QD=13.17;ReadPosRankSum=2.180;VQSLOD=3.3789;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:14,28:35:68.99:631,69,0	1/1:4,5:8:14.90:123,15,0	0/0:11,0:9:7.57:0,8,70	0/1:6,0:5:2.52:3,0,23	1/1:8,20:27:44.96:409,45,0	1/1:3,16:19:39.02:356,39,0	1/1:7,8:13:21:192,21,0	1/1:11,15:25:38.95:348,39,0	1/1:3,25:26:44.99:412,45,0	1/1:12,15:25:41.92:370,42,0	1/1:11,12:23:28.98:247,29,0	1/1:10,6:15:14.89:137,15,0	0/1:7,7:14:21.70:93,0,22	1/1:5,15:20:36.01:329,36,0	1/1:7,14:20:26.97:240,27,0	1/1:7,9:16:30:272,30,0	1/1:17,5:19:10.77:239,11,0	1/1:8,5:11:23.01:190,23,0	1/1:10,6:15:25.82:225,26,0	1/1:8,15:23:33:302,33,0	1/1:5,3:7:9:82,9,0	1/1:8,12:19:23.95:217,24,0	1/1:5,17:20:45.01:410,45,0	1/1:11,10:19:35.04:306,35,0	1/1:7,19:24:21.87:287,22,0	1/1:10,11:19:14.55:299,15,0	1/1:13,11:24:20.77:285,21,0	1/1:4,7:7:11.99:110,12,0
chr10	23629793	.	T	TC	6117.63	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-9.882;DP=689;FS=1.149;HRun=0;HaplotypeScore=66.7077;InbreedingCoeff=0.9990;MQ=88.23;MQ0=0;MQRankSum=-0.725;QD=42.19;ReadPosRankSum=1.025;VQSLOD=5.4841;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:63.20:0,63,863	0/0:16,0:16:48.13:0,48,651	0/0:26,0:26:75.23:0,75,1021	0/0:25,0:25:75.25:0,75,1039	0/0:36,0:36:99:0,108,1450	0/0:29,0:29:84.28:0,84,1173	0/0:16,0:16:48.16:0,48,670	0/0:44,0:44:99:0,132,1816	0/0:16,0:16:42.14:0,42,587	0/0:15,0:15:45.15:0,45,629	0/0:15,0:15:45.15:0,45,629	0/0:16,0:16:48.16:0,48,669	0/0:27,0:27:81.27:0,81,1131	0/0:16,0:16:42.14:0,42,587	0/0:30,0:30:81.27:0,81,1133	0/0:19,0:19:54.18:0,54,755	1/1:1,24:25:57.19:910,57,0	1/1:1,22:24:63.21:998,63,0	1/1:0,20:20:60.17:909,60,0	1/1:1,32:33:93.32:1477,93,0	1/1:1,42:43:99:1822,114,0	0/0:19,0:19:54.18:0,54,755	0/0:27,0:27:81.27:0,81,1132	0/0:26,0:26:75.23:0,75,1030	0/0:30,0:30:87.29:0,87,1216	0/0:29,0:29:87.29:0,87,1217	0/0:32,0:32:90.30:0,90,1246	0/0:13,0:13:20.74:0,21,293
chr10	23629866	.	TTGTTTGTG	T	1120.71	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=6.082;DP=632;FS=16.009;HRun=0;HaplotypeScore=164.1896;InbreedingCoeff=0.3184;MQ=78.23;MQ0=11;MQRankSum=-6.128;QD=7.84;ReadPosRankSum=0.439;VQSLOD=1.2865;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:69.02:0,69,1261	0/1:13,0:13:26.80:27,0,208	0/0:52,0:36:88.37:0,88,937	0/0:44,0:27:59.73:0,60,562	0/0:34,0:34:78.78:0,79,717	0/0:19,0:19:31.32:0,31,497	0/1:14,0:14:20.60:21,0,244	0/0:30,0:30:83.90:0,84,798	0/0:15,0:14:18.76:0,19,180	0/0:20,0:20:38.19:0,38,376	0/0:19,0:19:42.73:0,43,425	0/0:16,0:16:25.28:0,25,281	0/1:20,0:20:19.18:19,0,285	0/0:19,0:19:43.22:0,43,403	0/1:28,0:28:48.08:48,0,504	0/0:13,0:13:24.81:0,25,242	0/0:25,0:24:33.99:0,34,392	0/0:22,0:22:53.70:0,54,510	0/0:17,0:17:45.96:0,46,460	0/1:23,0:22:52.74:53,0,427	0/0:29,0:27:61.04:0,61,518	0/0:18,0:18:42.73:0,43,407	0/0:21,0:20:48.37:0,48,406	0/0:27,0:27:45.48:0,45,438	0/0:20,0:21:27.62:0,28,507	1/1:10,0:10:2.04:245,2,0	1/1:23,3:26:26.51:775,27,0	1/1:1,8:8:3.01:84,3,0
chr10	23629870	.	TTGTGTG	T	2892.24	PASS	AB=0.849;AC=42;AF=0.808;AN=52;BaseQRankSum=1.298;DP=656;FS=3.313;HRun=0;HaplotypeScore=141.1924;InbreedingCoeff=0.0530;MQ=73.04;MQ0=14;MQRankSum=-0.985;QD=5.58;ReadPosRankSum=-0.629;VQSLOD=2.3608;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:28:33.05:0,33,617	1/1:10,1:12:6.02:102,6,0	./.	./.	1/1:27,3:32:4.36:34,4,0	1/1:15,2:19:13.94:118,14,0	1/1:11,0:13:17.94:230,18,0	0/1:30,0:30:4.95:31,0,5	1/1:9,8:17:3.90:62,4,0	1/1:14,11:25:24.32:315,24,0	1/1:13,7:20:9.82:101,10,0	0/1:9,9:18:1.31:172,0,1	1/1:13,8:22:12.47:184,12,0	1/1:16,5:21:3.01:60,3,0	1/1:24,2:30:4.04:330,4,0	0/1:10,7:17:13.58:54,0,14	0/1:26,0:26:23.65:199,0,24	0/0:18,0:20:3.22:0,3,37	1/1:19,1:18:3.01:60,3,0	1/1:17,3:22:15:204,15,0	1/1:30,0:27:5.75:62,6,0	1/1:12,7:19:3.01:60,3,0	1/1:14,8:21:6.02:98,6,0	0/1:19,8:28:21.10:53,0,21	1/1:23,1:24:18.04:302,18,0	1/1:10,0:10:2.60:10,3,0	0/1:28,0:28:22.33:145,0,22	1/1:10,0:8:3.01:39,3,0
chr10	23630186	.	A	AG	28071.73	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-7.280;DP=654;FS=4.601;HRun=0;HaplotypeScore=56.3555;InbreedingCoeff=0.9953;MQ=78.58;MQ0=0;MQRankSum=-9.099;QD=44.99;ReadPosRankSum=4.882;VQSLOD=4.8129;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,18:18:54.18:863,54,0	1/1:0,9:9:27.09:431,27,0	0/0:17,0:17:48.14:0,48,629	0/0:13,0:13:39.13:0,39,535	1/1:0,28:28:78.09:1205,78,0	1/1:0,30:30:81.28:1295,81,0	1/1:0,16:16:42.14:671,42,0	1/1:0,31:31:93.29:1433,93,0	1/1:0,28:27:84.29:1339,84,0	1/1:0,37:37:99:1775,111,0	1/1:0,21:21:63.21:1005,63,0	1/1:0,18:18:48.16:767,48,0	1/1:0,28:28:81.28:1295,81,0	1/1:0,25:25:72.25:1151,72,0	1/1:0,28:28:81.28:1295,81,0	1/1:0,30:30:78.27:1247,78,0	1/1:1,34:35:93.32:1485,93,0	1/1:0,13:13:39.13:623,39,0	1/1:1,22:23:69.21:1058,69,0	1/1:2,26:28:72.24:1151,72,0	1/1:0,20:20:54.18:863,54,0	1/1:1,22:23:60.12:927,60,0	1/1:1,23:24:66.22:1055,66,0	1/1:0,24:24:69.24:1103,69,0	1/1:0,20:20:57.19:911,57,0	1/1:2,24:26:78.26:1225,78,0	1/1:1,33:33:99:1613,102,0	1/1:0,7:7:18.06:288,18,0
chr10	23630244	.	CT	C	1389.96	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=6.533;DP=591;FS=4.997;HRun=8;HaplotypeScore=86.0774;InbreedingCoeff=0.9803;MQ=78.23;MQ0=1;MQRankSum=-2.731;QD=22.42;ReadPosRankSum=-0.515;VQSLOD=3.8754;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:54.10:0,54,613	0/0:6,0:6:18.06:0,18,217	0/0:17,0:16:20.55:0,21,395	0/0:15,0:15:22.20:0,22,231	0/0:20,0:20:51.14:0,51,600	0/0:28,0:28:69.20:0,69,824	0/0:10,0:10:18.06:0,18,217	0/0:35,0:35:84.25:0,84,1006	0/0:21,0:20:54.16:0,54,649	0/0:32,0:32:93.27:0,93,1111	0/0:18,0:18:45.14:0,45,536	0/0:15,0:15:36.11:0,36,435	0/0:27,0:27:78.20:0,78,909	0/0:21,0:21:54.12:0,54,627	0/0:22,0:22:63.19:0,63,761	0/0:23,0:23:66.17:0,66,772	0/0:35,0:35:96.29:0,96,1159	0/0:22,0:22:60.16:0,60,708	0/0:21,0:21:39.08:0,39,454	0/0:22,0:22:62.93:0,63,737	0/0:19,0:18:45.13:0,45,532	0/0:17,0:17:45.14:0,45,543	0/0:22,0:22:60.10:0,60,681	0/0:20,0:20:54.17:0,54,652	0/0:21,0:21:57.17:0,57,687	1/1:2,22:24:66.10:637,66,0	1/1:2,27:29:81.12:776,81,0	1/1:4,5:9:12.01:116,12,0
chr10	23630896	.	C	CG	683.27	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.196;DP=443;FS=7.014;HRun=1;HaplotypeScore=73.9833;InbreedingCoeff=0.7348;MQ=89.85;MQ0=4;MQRankSum=-2.312;QD=32.54;ReadPosRankSum=1.051;VQSLOD=3.0075;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,17:21:54.11:778,54,0	0/0:6,0:6:18.06:0,18,233	0/0:27,0:25:51.38:0,51,544	0/0:32,0:17:3.34:0,3,177	0/0:32,0:31:90.26:0,90,1131	0/0:14,0:14:39.12:0,39,486	0/0:14,0:14:27.02:0,27,316	0/0:24,0:24:59.85:0,60,652	0/0:5,0:5:12.04:0,12,155	0/0:18,0:18:51.16:0,51,640	0/0:27,0:26:78.25:0,78,1001	0/0:11,0:11:21.04:0,21,232	0/0:15,0:15:42.14:0,42,542	0/0:17,0:17:38.91:0,39,468	0/0:16,0:16:39.11:0,39,480	0/0:6,0:6:15.04:0,15,183	0/0:18,0:18:48.07:0,48,580	0/0:4,0:4:9.03:0,9,116	0/0:11,0:11:32.98:0,33,361	0/0:16,0:15:39.13:0,39,504	0/0:3,0:3:9.02:0,9,104	0/0:6,0:6:18.04:0,18,210	0/0:12,0:12:26.92:0,27,365	0/0:13,0:13:30.07:0,30,361	0/0:19,0:19:42.10:0,42,504	0/0:18,0:18:31.63:0,32,588	0/0:23,0:22:69.13:0,69,817	0/0:9,0:9:27.09:0,27,349
chr10	23630934	.	T	TTC	3188.91	PASS	AB=0.758;AC=34;AF=0.630;AN=54;BaseQRankSum=-2.424;DP=470;FS=0.000;HRun=0;HaplotypeScore=62.4813;InbreedingCoeff=0.6226;MQ=52.66;MQ0=42;MQRankSum=3.523;QD=10.29;ReadPosRankSum=4.404;VQSLOD=2.6656;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:25:46.78:323,47,0	1/1:8,1:9:6.21:112,6,0	0/0:42,0:13:13.32:0,13,132	0/1:44,0:7:0.01:0,0,3	1/1:10,12:20:27.17:316,27,0	0/1:12,5:14:10.36:252,0,10	1/1:5,10:14:1.43:126,1,0	1/1:9,17:26:52.82:492,53,0	1/1:4,4:8:5.36:92,5,0	1/1:4,9:11:26.68:239,27,0	1/1:5,10:14:31.61:267,32,0	0/1:5,7:11:26.32:26,0,31	1/1:11,1:12:31.67:213,32,0	1/1:4,8:12:14.10:121,14,0	1/1:5,9:14:14.85:233,15,0	1/1:4,5:7:2.04:120,2,0	0/0:22,0:21:15.66:0,16,237	0/0:14,0:12:10.82:0,11,74	0/0:11,0:9:20.25:0,20,157	0/0:13,0:12:20.87:0,21,151	./.	1/1:7,0:6:11.93:106,12,0	0/1:6,7:12:6.19:181,0,6	1/1:7,8:12:11.49:83,11,0	1/1:5,7:12:8.75:76,9,0	0/0:25,0:24:53.62:0,54,426	0/0:15,0:14:38.88:0,39,331	0/0:16,0:10:13.77:0,14,110
chr10	23630935	.	T	TC	2173.83	PASS	AB=0.968;AC=31;AF=0.574;AN=54;BaseQRankSum=-0.908;DP=458;FS=2.198;HRun=0;HaplotypeScore=55.4361;InbreedingCoeff=0.4797;MQ=49.90;MQ0=42;MQRankSum=5.170;QD=7.13;ReadPosRankSum=3.601;VQSLOD=3.3462;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:16,12:26:48.07:474,48,0	0/1:9,0:9:4.20:70,0,4	0/0:39,0:12:13.34:0,13,132	0/1:42,0:5:0.17:0,0,2	1/1:22,1:21:25.09:221,25,0	0/1:17,0:14:12.55:104,0,13	1/1:13,2:14:2.57:118,3,0	1/1:27,0:26:3.57:273,4,0	1/1:9,0:8:7.28:30,7,0	1/1:12,1:11:26.62:205,27,0	1/1:13,2:14:15.47:191,15,0	0/1:12,0:11:5.98:6,0,25	0/1:10,2:12:12.55:120,0,13	1/1:12,1:12:7.13:70,7,0	0/1:15,0:14:3.30:79,0,3	1/1:9,0:6:6.67:47,7,0	0/0:22,0:21:50.20:0,50,339	0/0:15,0:12:11.89:0,12,87	0/0:10,0:8:21.82:0,22,174	0/0:12,0:11:31.57:0,32,207	./.	1/1:7,0:6:10.96:80,11,0	0/1:10,1:10:7.48:89,0,7	1/1:13,3:12:11.90:115,12,0	1/1:11,1:11:8.82:69,9,0	0/0:23,0:22:56.68:0,57,446	0/0:14,0:13:37.20:0,37,313	0/0:16,0:10:13.81:0,14,110
chr10	23631830	.	TTGTTTGTTTTGG	T	17904.48	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=12.985;DP=330;FS=5.491;HRun=0;HaplotypeScore=137.4587;InbreedingCoeff=0.9225;MQ=59.83;MQ0=0;MQRankSum=-13.184;QD=91.82;ReadPosRankSum=1.958;VQSLOD=4.2605;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,8:11:27.09:920,27,0	1/1:0,2:2:6.02:226,6,0	0/0:10,0:10:27.09:0,27,1006	0/0:4,0:3:9.03:0,9,337	1/1:3,14:17:39.12:1287,39,0	1/1:1,16:17:48.16:1811,48,0	1/1:1,6:7:18.06:679,18,0	1/1:5,18:23:57.18:2062,57,0	1/1:2,7:9:24.07:817,24,0	1/1:0,14:14:39.13:1472,39,0	1/1:3,18:21:45.15:1697,45,0	1/1:2,7:9:24.08:905,24,0	1/1:0,7:7:21.07:792,21,0	1/1:0,3:3:9.03:290,9,0	1/1:2,10:12:30.10:1097,30,0	1/1:1,10:11:30.10:1132,30,0	0/0:18,0:18:51.17:0,51,3139	0/0:24,0:24:72.25:0,72,4034	0/0:19,0:19:57.19:0,57,3217	0/0:14,0:14:42.14:0,42,2401	0/0:6,0:6:18.06:0,18,994	1/1:1,2:3:6.02:226,6,0	1/1:4,9:13:27.09:1019,27,0	1/1:1,1:2:3.01:113,3,0	1/1:0,13:13:36.12:1358,36,0	0/0:18,0:18:51.17:0,51,2941	0/0:11,0:11:27.09:0,27,1662	0/0:11,0:11:33.11:0,33,1632
chr10	23631872	.	TA	T	4504.63	PASS	AB=0.938;AC=38;AF=0.679;AN=56;BaseQRankSum=11.926;DP=372;FS=0.431;HRun=10;HaplotypeScore=99.3400;InbreedingCoeff=0.7948;MQ=59.91;MQ0=0;MQRankSum=-7.399;QD=18.54;ReadPosRankSum=-1.536;VQSLOD=4.3817;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,12:13:29.95:253,30,0	1/1:1,2:3:5.94:44,6,0	0/1:11,0:8:10.49:10,0,67	0/1:6,1:5:14.20:14,0,67	1/1:0,20:20:53.73:441,54,0	1/1:1,20:21:56.87:479,57,0	1/1:1,5:6:14.99:130,15,0	1/1:13,15:28:59.97:521,60,0	1/1:2,8:10:17.92:147,18,0	1/1:3,13:16:15.24:286,15,0	1/1:5,12:17:35.91:302,36,0	1/1:0,12:12:32.92:278,33,0	1/1:0,10:10:26.84:217,27,0	1/1:0,6:6:14.99:129,15,0	1/1:2,13:15:35.99:311,36,0	1/1:1,10:11:29.87:245,30,0	0/0:19,0:19:51.14:0,51,564	0/0:24,0:24:66.18:0,66,729	0/0:22,0:22:57.15:0,57,630	0/0:18,0:18:45.09:0,45,480	0/0:5,0:5:9.02:0,9,100	1/1:0,5:5:14.95:123,15,0	1/1:3,8:11:23.92:200,24,0	1/1:1,3:4:5.99:52,6,0	1/1:2,14:16:38.84:321,39,0	0/0:16,0:16:45.12:0,45,498	0/0:16,0:16:42.09:0,42,454	0/0:9,0:9:25.31:0,25,269
chr10	23633414	.	C	CA	3159.66	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=11.069;DP=483;FS=4.009;HRun=4;HaplotypeScore=52.5062;InbreedingCoeff=0.9429;MQ=73.40;MQ0=0;MQRankSum=-1.742;QD=33.61;ReadPosRankSum=-0.860;VQSLOD=3.8008;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:51.15:0,51,578	0/0:8,0:8:24.07:0,24,272	0/0:12,0:12:29.29:0,29,311	0/0:6,0:6:0.83:0,1,118	0/0:32,0:32:96.27:0,96,1089	0/0:13,0:13:36.10:0,36,407	0/0:10,0:10:27.08:0,27,306	0/0:21,0:21:48.13:0,48,544	0/0:18,0:18:54.15:0,54,612	0/0:20,0:20:57.16:0,57,647	0/0:29,0:28:84.24:0,84,953	0/0:15,0:15:45.13:0,45,510	0/0:22,0:22:63.16:0,63,704	0/0:13,0:13:30.07:0,30,331	0/0:20,0:20:60.07:0,60,662	0/0:11,0:11:33.08:0,33,364	1/1:2,22:24:57.19:777,57,0	1/1:2,19:21:51.17:686,51,0	1/1:1,15:16:45.09:577,45,0	1/1:0,26:26:78.22:1047,78,0	1/1:0,7:7:18.06:246,18,0	0/0:12,0:12:30.08:0,30,340	0/0:19,0:19:57.15:0,57,636	0/0:8,0:8:24.07:0,24,272	0/0:21,0:21:60.17:0,60,681	0/0:19,0:19:54.15:0,54,613	0/0:34,0:34:96.26:0,96,1078	0/0:8,0:8:24.07:0,24,272
chr10	23634763	.	A	AT	12368.88	PASS	AB=1.000;AC=47;AF=0.839;AN=56;BaseQRankSum=-7.643;DP=519;FS=0.971;HRun=8;HaplotypeScore=53.3658;InbreedingCoeff=0.8966;MQ=78.54;MQ0=0;MQRankSum=-2.965;QD=28.24;ReadPosRankSum=1.670;VQSLOD=5.3492;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,5:5:12.04:138,12,0	1/1:1,7:8:21.06:242,21,0	0/1:11,0:11:2.15:2,0,168	0/0:16,0:16:32.81:0,33,294	1/1:4,26:30:84.04:946,84,0	1/1:2,20:22:51.11:574,51,0	1/1:6,13:20:41.92:451,42,0	1/1:2,18:20:54.13:603,54,0	1/1:3,14:17:42.12:485,42,0	1/1:7,22:29:66.20:761,66,0	1/1:5,27:32:56.78:908,57,0	1/1:1,14:15:36.11:415,36,0	1/1:0,13:13:30.09:346,30,0	1/1:1,19:20:51.15:589,51,0	1/1:2,12:14:36.11:415,36,0	1/1:2,15:17:42.12:485,42,0	1/1:2,17:19:51.15:587,51,0	1/1:4,14:18:39.59:451,40,0	1/1:1,15:16:48.12:542,48,0	1/1:2,28:30:78.23:900,78,0	1/1:1,9:10:27.08:312,27,0	1/1:1,16:17:45.13:519,45,0	1/1:1,14:15:42.12:485,42,0	1/1:1,11:12:33.10:381,33,0	1/1:2,26:28:72.21:831,72,0	0/0:30,0:30:84.04:0,84,769	0/0:30,0:30:78.02:0,78,709	0/0:5,0:5:9:0,9,82
chr10	23635827	.	AGTGTGTGTGT	A	842.59	PASS	AB=0.945;AC=21;AF=0.500;AN=42;BaseQRankSum=3.925;DP=482;FS=9.012;HRun=0;HaplotypeScore=136.4213;InbreedingCoeff=0.3738;MQ=72.15;MQ0=7;MQRankSum=-3.198;QD=4.63;ReadPosRankSum=-0.816;VQSLOD=2.0756;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:34:9.03:0,9,168	1/1:6,0:6:2.94:18,3,0	./.	./.	./.	0/1:19,0:19:1.57:2,0,99	1/1:20,0:19:5.87:36,6,0	0/0:17,0:17:0:0,0,0	1/1:10,0:12:3.01:41,3,0	0/0:15,0:15:0.47:0,0,1	./.	0/1:20,1:21:15.84:146,0,16	1/1:14,0:14:3.01:40,3,0	0/1:19,3:22:55.93:74,0,56	1/1:9,2:11:3.01:88,3,0	1/1:13,4:17:15.03:356,15,0	0/0:27,0:25:9.02:0,9,188	0/0:10,0:10:6.02:0,6,111	./.	0/0:14,0:13:3.01:0,3,55	0/0:32,0:31:6.02:0,6,123	1/1:8,0:8:2.80:13,3,0	./.	1/1:22,0:20:11.95:120,12,0	1/1:9,0:9:3.01:47,3,0	0/0:19,0:19:14.41:0,14,289	./.	0/0:9,0:10:12.04:0,12,314
chr10	23637156	.	CCACA	C	1208.88	PASS	AC=38;AF=0.864;AN=44;BaseQRankSum=-0.612;DP=416;FS=1.805;HRun=0;HaplotypeScore=83.1036;InbreedingCoeff=0.2761;MQ=63.25;MQ0=20;MQRankSum=-1.120;QD=4.58;ReadPosRankSum=-0.881;VQSLOD=1.8367;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:31:20.59:0,21,327	1/1:1,3:4:6.02:92,6,0	./.	./.	1/1:8,0:10:3:28,3,0	1/1:15,1:17:6.01:74,6,0	1/1:18,7:25:12.04:184,12,0	0/0:16,0:16:1.25:0,1,3	1/1:8,5:12:9.03:138,9,0	1/1:12,0:12:1.82:5,2,0	./.	1/1:8,0:8:3.01:46,3,0	1/1:7,3:9:2.77:46,3,0	1/1:8,5:13:9.02:138,9,0	1/1:11,1:13:9.02:108,9,0	1/1:16,3:19:3.01:46,3,0	1/1:12,0:13:2.50:9,2,0	./.	1/1:13,0:14:3:28,3,0	1/1:11,0:15:3:28,3,0	./.	1/1:9,0:13:6.01:56,6,0	1/1:7,1:8:3.01:46,3,0	1/1:20,6:25:11.41:183,11,0	1/1:12,4:14:3.01:46,3,0	1/1:13,0:13:2.50:9,2,0	./.	0/0:2,0:1:0:0,0,0
chr10	23638063	.	ATCTCTC	A	716.61	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.633;DP=591;FS=0.000;HRun=0;HaplotypeScore=119.3702;InbreedingCoeff=0.9873;MQ=69.25;MQ0=0;MQRankSum=-5.145;QD=42.15;ReadPosRankSum=-0.073;VQSLOD=3.5019;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,15:17:36.08:811,36,0	0/0:10,0:10:30.09:0,30,954	0/0:22,0:21:59.41:0,59,1294	0/0:21,0:19:48.58:0,49,1170	0/0:28,0:28:78.24:0,78,2603	0/0:32,0:31:90.26:0,90,2961	0/0:17,0:17:51.16:0,51,1676	0/0:36,0:36:99:0,99,2576	0/0:16,0:16:45.13:0,45,1448	0/0:23,0:23:66.22:0,66,2116	0/0:20,0:20:60.19:0,60,2080	0/0:23,0:23:63.20:0,63,2173	0/0:26,0:26:72.23:0,72,2461	0/0:19,0:19:57.18:0,57,1963	0/0:22,0:22:63.20:0,63,2176	0/0:23,0:23:69.21:0,69,2316	0/0:19,0:19:57.20:0,57,1962	0/0:12,0:12:36.03:0,36,1028	0/0:24,0:22:60.19:0,60,1999	0/0:28,0:28:78.22:0,78,2422	0/0:7,0:7:21.06:0,21,615	0/0:21,0:21:60.18:0,60,1923	0/0:19,0:19:57.16:0,57,1849	0/0:16,0:16:42.10:0,42,1406	0/0:23,0:23:66.20:0,66,2209	0/0:30,0:30:90.30:0,90,3047	0/0:30,0:30:90.31:0,90,3186	0/0:6,0:6:18.06:0,18,585
chr10	23640152	.	CT	C	9090.76	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=8.574;DP=606;FS=0.729;HRun=9;HaplotypeScore=64.3858;InbreedingCoeff=0.9978;MQ=81.06;MQ0=0;MQRankSum=-1.546;QD=22.23;ReadPosRankSum=2.025;VQSLOD=5.7572;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,16:18:28.31:417,28,0	1/1:1,10:11:24.01:220,24,0	0/0:20,0:20:39.52:0,40,420	0/0:20,1:19:20.51:0,21,354	1/1:3,18:21:53:463,53,0	1/1:3,26:29:66.03:604,66,0	1/1:2,17:19:45.02:412,45,0	1/1:7,31:39:91.93:797,92,0	1/1:1,24:25:66.03:604,66,0	1/1:6,28:34:84.04:769,84,0	1/1:0,16:16:45.02:412,45,0	1/1:2,13:15:36.02:330,36,0	1/1:1,23:24:63.03:577,63,0	1/1:6,21:27:60.02:549,60,0	1/1:3,21:24:57.03:522,57,0	1/1:2,18:20:51.03:467,51,0	0/0:18,0:18:48.14:0,48,554	0/0:16,0:16:33.10:0,33,381	0/0:19,0:19:48.10:0,48,532	0/0:20,0:20:60.18:0,60,692	0/0:17,0:17:48.14:0,48,554	1/1:2,18:20:48.02:439,48,0	1/1:3,23:26:60.03:549,60,0	1/1:1,16:17:42.02:384,42,0	1/1:3,21:24:63.03:577,63,0	0/0:18,1:19:20.64:0,21,465	0/0:37,0:39:99:0,99,1101	0/0:8,0:8:24.07:0,24,277
chr10	23641891	.	C	CT	18659.52	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-11.762;DP=604;FS=15.570;HRun=3;HaplotypeScore=50.5352;InbreedingCoeff=0.9968;MQ=77.99;MQ0=0;MQRankSum=-2.591;QD=37.02;ReadPosRankSum=-0.973;VQSLOD=3.0809;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,14:14:36.12:504,36,0	1/1:0,11:11:33.11:462,33,0	0/0:20,0:20:39.09:0,39,445	0/0:13,0:13:33.10:0,33,396	1/1:1,20:21:57.19:798,57,0	1/1:3,16:19:45.15:630,45,0	1/1:1,19:20:48.16:672,48,0	1/1:3,28:31:78.26:1086,78,0	1/1:1,26:27:72.24:1008,72,0	1/1:2,23:25:69.23:966,69,0	1/1:0,24:24:72.20:986,72,0	1/1:1,20:21:60.20:840,60,0	1/1:1,22:23:66.22:924,66,0	1/1:2,29:32:78.26:1093,78,0	1/1:1,31:32:81.27:1135,81,0	1/1:0,17:17:48.16:672,48,0	1/1:1,25:26:72.24:1008,72,0	1/1:1,31:32:72.24:1008,72,0	1/1:1,20:21:60.18:813,60,0	1/1:1,27:28:78.22:1070,78,0	1/1:0,6:6:18.06:252,18,0	1/1:2,15:17:42.14:588,42,0	1/1:0,22:22:63.21:882,63,0	1/1:0,9:9:21.07:294,21,0	1/1:1,25:26:69.23:966,69,0	0/0:23,0:23:66.20:0,66,792	0/0:35,0:35:99:0,105,1247	0/0:9,0:9:27.08:0,27,324
chr10	23642257	.	C	CT	4743.19	PASS	AB=0.649;AC=33;AF=0.589;AN=56;BaseQRankSum=-5.737;DP=460;FS=0.933;HRun=12;HaplotypeScore=56.2472;InbreedingCoeff=0.6927;MQ=70.48;MQ0=0;MQRankSum=1.138;QD=16.19;ReadPosRankSum=1.253;VQSLOD=5.8508;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,3:18:37.42:230,37,0	1/1:1,6:8:20.87:189,21,0	0/0:10,0:10:9.66:0,10,67	0/0:6,0:7:0:0,0,35	1/1:5,12:19:42.54:362,43,0	1/1:4,19:24:35.02:489,35,0	0/1:6,5:11:6.42:102,0,6	1/1:10,22:32:47.62:590,48,0	1/1:3,14:19:41.90:394,42,0	1/1:6,13:19:20.14:352,20,0	1/1:7,14:21:33.88:309,34,0	0/1:7,11:18:3.88:128,0,4	1/1:5,11:16:25.09:234,25,0	1/1:0,12:12:27.04:263,27,0	0/1:7,9:16:20.28:125,0,20	1/1:1,12:13:24.04:233,24,0	0/0:22,0:22:38.66:0,39,284	0/0:17,0:17:41.69:0,42,302	0/0:25,0:25:41.63:0,42,306	0/0:19,0:23:47.77:0,48,324	0/0:8,0:8:11.89:0,12,87	1/1:1,3:4:3:29,3,0	1/1:5,10:15:27.04:263,27,0	1/1:0,7:7:15.02:146,15,0	1/1:4,14:20:0.92:306,1,0	0/0:23,0:22:25.82:0,26,325	0/0:21,1:22:21.52:0,22,321	0/0:9,0:9:8.78:0,9,65
chr10	23643853	.	G	GT	3827.33	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-11.543;DP=639;FS=17.713;HRun=6;HaplotypeScore=57.7180;InbreedingCoeff=0.9924;MQ=77.95;MQ0=0;MQRankSum=-1.045;QD=32.44;ReadPosRankSum=2.210;VQSLOD=2.0434;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:78.15:0,78,786	0/0:14,0:14:39.07:0,39,390	0/0:18,0:18:36.06:0,36,367	0/0:13,0:13:38.77:0,39,361	0/0:28,0:28:66.14:0,66,673	0/0:17,0:17:42.09:0,42,428	0/0:22,0:22:60.12:0,60,606	0/0:22,0:22:54.02:0,54,515	0/0:15,0:15:39.09:0,39,398	0/0:34,0:34:93.20:0,93,944	0/0:21,0:21:60.13:0,60,611	0/0:24,0:24:60.13:0,60,612	0/0:19,0:19:45.10:0,45,459	0/0:21,0:21:60.13:0,60,611	0/0:26,0:25:72.16:0,72,735	0/0:25,0:25:72.16:0,72,735	1/1:2,25:27:63.20:793,63,0	1/1:1,20:21:57.18:717,57,0	1/1:2,24:26:65.05:876,65,0	1/1:1,26:27:78.20:951,78,0	1/1:2,15:17:39.12:491,39,0	0/0:20,0:20:54.12:0,54,550	0/0:27,0:27:75.07:0,75,750	0/0:26,0:26:75.17:0,75,765	0/0:24,0:24:66.12:0,66,665	0/0:41,0:41:99:0,120,1207	0/0:31,0:31:87.12:0,87,857	0/0:5,0:5:11.82:0,12,122
chr10	23648796	.	A	AGTTG	11900.03	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-9.496;DP=612;FS=0.827;HRun=0;HaplotypeScore=99.0906;InbreedingCoeff=0.9483;MQ=59.60;MQ0=5;MQRankSum=4.937;QD=32.87;ReadPosRankSum=3.381;VQSLOD=5.0390;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:10.73:0,11,438	1/1:1,8:9:12.04:292,12,0	0/0:25,0:15:20.95:0,21,240	0/0:30,0:16:14.02:0,14,184	1/1:5,20:25:57.12:1161,57,0	1/1:7,22:30:39.13:949,39,0	1/1:7,7:15:15.05:349,15,0	1/1:41,0:41:39.12:645,39,0	1/1:7,20:28:36.12:874,36,0	1/1:10,15:25:51.12:1079,51,0	1/1:4,11:15:33.04:674,33,0	1/1:5,12:19:30.10:730,30,0	1/1:3,20:27:38.81:948,39,0	1/1:3,21:25:33.11:782,33,0	1/1:5,12:18:24.08:584,24,0	1/1:5,15:22:28.91:662,29,0	0/0:18,0:18:36.08:0,36,540	0/0:13,0:13:1.08:0,1,253	0/0:28,0:28:53.84:0,54,802	0/0:26,0:26:66.22:0,66,1041	0/0:14,0:14:35.99:0,36,537	1/1:1,6:7:18.06:438,18,0	1/1:6,14:21:23.67:530,24,0	1/1:4,11:15:24.08:584,24,0	1/1:7,11:20:27.09:621,27,0	0/0:26,0:26:57.19:0,57,894	0/0:29,0:29:81.26:0,81,1285	0/0:18,0:18:45.12:0,45,685
chr10	23649064	.	AG	A	10838.83	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=12.017;DP=442;FS=3.738;HRun=1;HaplotypeScore=44.5172;InbreedingCoeff=0.9763;MQ=75.91;MQ0=0;MQRankSum=-0.828;QD=38.99;ReadPosRankSum=-1.726;VQSLOD=4.5036;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:7:21.07:0,21,335	1/1:0,7:7:21.07:294,21,0	0/0:9,0:9:27.09:0,27,431	0/0:8,0:8:18.06:0,18,288	1/1:0,36:36:99:1342,99,0	1/1:0,20:20:57.19:797,57,0	1/1:0,12:12:33.11:461,33,0	1/1:0,30:30:90.29:1243,90,0	1/1:0,13:13:39.13:545,39,0	1/1:0,22:22:66.19:902,66,0	1/1:0,26:26:75.05:977,75,0	1/1:0,12:12:36.12:503,36,0	1/1:0,19:19:51.17:713,51,0	1/1:0,9:9:27.09:378,27,0	1/1:0,10:10:27.09:378,27,0	1/1:0,14:14:39.13:545,39,0	0/0:20,0:20:60.20:0,60,959	0/0:2,0:2:6.02:0,6,96	0/0:17,0:17:51.17:0,51,814	0/0:23,0:23:66.23:0,66,1054	0/0:8,0:8:24.08:0,24,384	1/1:0,7:7:18.03:231,18,0	1/1:0,20:20:47.94:650,48,0	1/1:0,4:4:12.04:168,12,0	1/1:0,17:17:51.17:713,51,0	0/0:26,0:26:78.27:0,78,1247	0/0:28,0:27:81.28:0,81,1292	0/0:16,0:16:48.16:0,48,767
chr10	23649728	.	TTTTTTTGGTTCTTTTTTTCG	T	298.88	PASS	AC=16;AF=0.667;AN=24;BaseQRankSum=-1.466;DP=102;FS=3.442;HRun=0;HaplotypeScore=29.1950;InbreedingCoeff=0.4946;MQ=61.95;MQ0=15;MQRankSum=-1.569;QD=13.59;ReadPosRankSum=-3.780;VQSLOD=0.0238;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	1/1:3,0:1:3:29,3,0	0/0:16,0:6:18.06:0,18,683	0/0:15,0:6:11.40:0,11,193	1/1:2,0:2:3:25,3,0	./.	1/1:2,0:1:2.96:19,3,0	./.	./.	1/1:1,0:1:3.01:46,3,0	1/1:3,0:2:2.99:24,3,0	./.	./.	./.	./.	./.	0/0:4,0:3:3.01:0,3,293	./.	1/1:1,5:5:14.83:139,15,0	1/1:3,0:3:9:100,9,0	./.	./.	./.	./.	./.	1/1:2,0:1:2.99:24,3,0	0/0:3,0:3:3.01:0,3,293	./.
chr10	23652024	.	G	GT	8752.03	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-7.151;DP=472;FS=4.743;HRun=8;HaplotypeScore=80.6486;InbreedingCoeff=0.9099;MQ=75.41;MQ0=0;MQRankSum=-0.940;QD=25.74;ReadPosRankSum=1.099;VQSLOD=5.6226;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:58.99:0,59,560	1/1:1,5:6:3.01:34,3,0	0/0:8,0:8:5.99:0,6,55	0/0:11,0:12:3.05:0,3,91	1/1:1,13:14:36.04:396,36,0	1/1:3,17:19:42.08:467,42,0	1/1:2,11:13:30:315,30,0	1/1:8,22:30:63.13:690,63,0	1/1:4,16:20:39.11:447,39,0	1/1:4,14:19:45.13:512,45,0	1/1:2,8:10:21.06:240,21,0	1/1:2,16:18:42.08:460,42,0	1/1:2,22:24:51.15:584,51,0	1/1:0,15:15:39.11:447,39,0	1/1:4,21:25:60.17:688,60,0	1/1:3,17:20:41.99:481,42,0	0/0:34,0:34:96.05:0,96,878	0/0:6,0:6:15.01:0,15,137	0/0:18,0:18:44.98:0,45,397	0/0:11,0:11:30.02:0,30,275	0/0:17,0:17:41.74:0,42,363	1/1:1,10:11:30.04:323,30,0	1/1:3,10:13:24.07:275,24,0	1/1:3,13:16:33.09:379,33,0	1/1:0,11:11:27.08:310,27,0	1/1:1,25:26:75.20:844,75,0	1/1:2,24:26:66.19:757,66,0	1/1:0,3:3:9.03:103,9,0
chr10	23652134	.	CGTGTGTGTGTGTGT	C	4397.51	PASS	AB=0.845;AC=39;AF=0.813;AN=48;BaseQRankSum=3.472;DP=375;FS=34.125;HRun=0;HaplotypeScore=135.0229;InbreedingCoeff=0.1660;MQ=73.71;MQ0=10;MQRankSum=-2.611;QD=14.61;ReadPosRankSum=1.216;VQSLOD=2.4140;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:20:9.01:0,9,117	./.	0/1:31,0:18:0:0,0,1	0/0:32,0:26:10.96:0,11,64	1/1:7,2:10:2.71:117,3,0	1/1:9,14:22:15.05:589,15,0	1/1:9,1:10:9:190,9,0	0/1:18,0:21:9.04:9,0,15	1/1:5,4:9:3.01:118,3,0	1/1:6,6:12:15.04:476,15,0	1/1:1,8:9:6.02:236,6,0	1/1:5,6:11:6.49:236,6,0	1/1:7,4:11:6.45:138,6,0	./.	1/1:9,4:12:6.02:236,6,0	1/1:3,2:7:12.04:391,12,0	1/1:6,0:21:9:137,9,0	1/1:4,0:12:3.01:57,3,0	0/1:10,0:12:43.86:44,0,47	1/1:2,2:5:3.01:112,3,0	0/1:26,0:25:37.45:37,0,72	0/1:1,5:7:11.01:209,0,11	./.	1/1:8,7:14:3.01:118,3,0	1/1:2,9:10:12.04:462,12,0	1/1:7,0:16:16.09:390,16,0	./.	1/1:3,0:6:2.88:97,3,0
chr10	23652285	.	AT	A	2054.13	PASS	AB=1.000;AC=52;AF=0.929;AN=56;BaseQRankSum=-2.826;DP=226;FS=28.687;HRun=10;HaplotypeScore=41.0841;InbreedingCoeff=0.2298;MQ=79.11;MQ0=3;MQRankSum=-0.782;QD=10.70;ReadPosRankSum=3.573;VQSLOD=0.6014;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:8,0:8:5.50:5,0,29	1/1:1,2:3:5.98:50,6,0	0/1:22,0:11:9.94:10,0,63	0/0:34,0:14:14.05:0,14,107	1/1:3,12:15:32.98:284,33,0	1/1:1,5:6:14.90:111,15,0	1/1:1,1:2:2.99:24,3,0	1/1:4,9:12:26.99:234,27,0	1/1:2,4:6:5.98:50,6,0	1/1:1,5:6:11.04:84,11,0	1/1:2,4:6:12:104,12,0	1/1:0,3:3:9:78,9,0	1/1:1,4:5:8.99:76,9,0	1/1:1,4:5:9:78,9,0	1/1:2,2:4:11.79:88,12,0	1/1:0,4:4:9:78,9,0	1/1:6,7:13:20.98:182,21,0	1/1:0,2:2:6:52,6,0	1/1:10,1:11:1.04:67,1,0	1/1:2,6:8:17.99:156,18,0	1/1:2,1:3:2.99:25,3,0	1/1:5,0:5:5.97:48,6,0	1/1:1,2:3:5.99:52,6,0	1/1:0,3:3:9:78,9,0	1/1:5,6:11:8.97:78,9,0	1/1:1,0:12:20.14:59,20,0	1/1:1,0:6:4.07:12,4,0	1/1:5,0:5:4.07:12,4,0
chr10	23652296	.	ATTTTTTTAT	A	2601.96	PASS	AB=1.000;AC=43;AF=0.860;AN=50;BaseQRankSum=-2.899;DP=211;FS=38.299;HRun=0;HaplotypeScore=55.4862;InbreedingCoeff=0.3591;MQ=64.36;MQ0=14;MQRankSum=-0.470;QD=20.65;ReadPosRankSum=3.188;VQSLOD=1.0307;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:6:15.05:0,15,360	1/1:1,1:2:3.01:80,3,0	0/0:27,0:10:6.80:0,7,92	0/0:44,0:10:17.99:0,18,358	1/1:8,3:11:15.01:287,15,0	1/1:0,5:5:15.05:395,15,0	1/1:0,1:1:3.01:80,3,0	1/1:13,1:10:9.01:128,9,0	1/1:4,1:4:6.01:105,6,0	1/1:4,1:5:9.03:184,9,0	./.	1/1:3,0:3:5.99:49,6,0	1/1:4,1:5:3.01:80,3,0	1/1:5,0:4:6.02:68,6,0	1/1:3,1:4:9.03:194,9,0	1/1:4,0:4:3.01:34,3,0	1/1:10,1:11:18.05:288,18,0	1/1:2,0:2:6.02:100,6,0	0/1:10,0:6:19.62:20,0,42	1/1:6,0:6:2.99:25,3,0	1/1:2,1:2:3.01:74,3,0	./.	./.	1/1:3,0:3:3.01:63,3,0	1/1:8,0:7:6.01:60,6,0	1/1:9,1:10:12.03:276,12,0	1/1:5,0:5:3:35,3,0	1/1:4,0:2:6.02:114,6,0
chr10	23652304	.	ATT	A	825.71	PASS	AB=0.937;AC=41;AF=0.820;AN=50;BaseQRankSum=2.194;DP=194;FS=25.872;HRun=8;HaplotypeScore=39.5111;InbreedingCoeff=0.2185;MQ=44.44;MQ0=21;MQRankSum=0.201;QD=7.65;ReadPosRankSum=3.069;VQSLOD=-0.4781;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,0:6:0.91:5,1,0	1/1:2,0:2:2.68:11,3,0	0/0:27,1:9:1.71:0,2,131	0/0:43,0:6:16.70:0,17,185	1/1:8,1:9:14.52:97,15,0	1/1:7,0:6:8.57:46,9,0	1/1:1,0:1:2.68:11,3,0	0/1:15,2:13:5.25:74,0,5	1/1:3,0:2:5.67:36,6,0	1/1:4,0:4:3.56:42,4,0	./.	1/1:2,0:2:5.99:49,6,0	0/1:3,0:3:5.84:6,0,14	1/1:2,2:3:6.02:68,6,0	1/1:1,1:3:7.72:51,8,0	1/1:2,1:3:3.01:34,3,0	0/1:10,1:10:13.80:60,0,14	1/1:1,1:2:6:59,6,0	0/0:7,0:5:7.93:0,8,25	1/1:5,0:5:2.99:25,3,0	1/1:3,0:1:2.96:19,3,0	./.	./.	1/1:4,0:3:3:28,3,0	1/1:4,1:4:6.01:60,6,0	1/1:6,1:7:11.87:85,12,0	1/1:1,1:2:3:35,3,0	1/1:2,2:2:5.98:55,6,0
chr10	23652308	.	T	TTTA	1288.41	PASS	AB=0.946;AC=32;AF=0.640;AN=50;BaseQRankSum=-2.284;DP=183;FS=8.970;HRun=0;HaplotypeScore=42.4207;InbreedingCoeff=0.0599;MQ=42.64;MQ0=23;MQRankSum=-0.446;QD=12.63;ReadPosRankSum=-3.008;VQSLOD=0.8345;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:5:15:0,15,131	0/1:2,0:2:16.48:28,0,16	0/0:26,0:8:0.83:0,1,128	0/0:43,0:6:17.99:0,18,219	1/1:5,1:6:14.96:205,15,0	0/1:7,0:6:42.40:42,0,55	0/0:2,0:2:2.98:0,3,22	0/1:15,1:12:60.85:107,0,61	0/1:3,0:2:16.53:19,0,17	0/1:3,2:5:16.45:112,0,16	./.	1/1:2,0:2:5.99:49,6,0	0/0:3,0:3:5.91:0,6,40	1/1:3,0:2:6.02:68,6,0	0/1:3,0:3:24.98:25,0,37	1/1:2,0:2:5.95:52,6,0	0/1:9,1:9:60.92:124,0,61	1/1:2,0:2:6.02:100,6,0	0/1:11,0:5:7.07:7,0,29	1/1:4,0:3:5.92:42,6,0	1/1:4,0:2:3.01:54,3,0	./.	./.	1/1:5,0:4:3.01:63,3,0	1/1:4,0:3:6.01:60,6,0	1/1:5,2:7:11.70:187,12,0	1/1:2,0:2:5.98:55,6,0	1/1:4,0:2:5.60:44,6,0
chr10	23662869	.	TC	T	570.28	PASS	AB=0.767;AC=6;AF=0.107;AN=56;BaseQRankSum=-2.902;DP=354;FS=7.416;HRun=10;HaplotypeScore=52.2412;InbreedingCoeff=0.3005;MQ=91.04;MQ0=4;MQRankSum=-0.336;QD=5.94;ReadPosRankSum=1.327;VQSLOD=0.5686;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:14:11.82:0,12,67	0/0:4,0:4:5.84:0,6,40	0/1:43,2:27:28.08:28,0,230	0/0:32,0:17:0.82:0,1,44	0/0:10,0:9:5.99:0,6,51	0/0:17,0:17:17.49:0,17,112	0/0:6,0:6:5.99:0,6,48	0/0:19,0:19:11.40:0,11,59	0/0:7,0:7:11.97:0,12,95	0/0:10,0:10:8.67:0,9,63	0/0:6,0:6:8.78:0,9,57	0/0:4,0:4:11.49:0,11,63	0/0:4,0:9:5.80:0,6,31	0/0:8,0:8:8.76:0,9,57	0/0:2,0:4:8.68:0,9,49	0/0:4,0:4:5.68:0,6,28	0/0:3,0:15:20.42:0,20,144	0/0:3,0:11:5.05:0,5,27	0/0:16,0:17:42.68:0,43,292	0/0:18,0:19:10.64:0,11,75	0/0:2,0:6:3:0,3,29	0/0:5,0:6:0.61:0,1,14	0/0:14,0:14:11.81:0,12,80	0/0:8,0:8:8.52:0,9,42	0/0:7,0:7:11.74:0,12,77	1/1:5,10:15:32.47:287,32,0	1/1:4,13:17:19.44:201,19,0	0/1:5,14:19:17.41:185,0,17
chr10	23662879	.	C	CCT	3024.31	PASS	AB=0.887;AC=39;AF=0.696;AN=56;BaseQRankSum=-3.137;DP=394;FS=27.611;HRun=0;HaplotypeScore=84.0982;InbreedingCoeff=0.2700;MQ=97.82;MQ0=4;MQRankSum=-3.242;QD=10.80;ReadPosRankSum=-3.898;VQSLOD=0.6509;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,1:10:20.56:210,21,0	0/1:6,1:7:16.18:48,0,16	0/0:57,0:38:33.72:0,34,474	0/1:35,0:20:1.77:2,0,89	1/1:19,1:19:21.91:294,22,0	1/1:7,5:13:27.48:299,27,0	0/1:1,0:4:2.19:2,0,14	1/1:3,8:12:26.56:253,27,0	0/1:1,0:7:11.31:11,0,12	1/1:8,0:9:26.83:229,27,0	1/1:7,1:8:0.38:145,0,0	1/1:7,2:9:26.97:285,27,0	1/1:9,0:9:15.01:157,15,0	1/1:2,6:10:11.36:118,11,0	1/1:7,0:7:2.55:119,3,0	1/1:0,4:4:6.02:108,6,0	0/1:22,0:22:7.85:8,0,82	0/1:15,0:15:25.64:26,0,29	0/1:19,0:19:53.89:140,0,54	0/1:17,0:17:58.24:58,0,82	0/1:8,0:8:3:3,0,54	1/1:1,1:5:2.96:19,3,0	1/1:12,0:13:27.54:277,28,0	1/1:1,7:9:9.03:163,9,0	1/1:7,1:8:21.01:226,21,0	0/0:16,0:16:13.30:0,13,200	0/0:20,0:20:32.01:0,32,225	0/0:20,0:20:10.44:0,10,176
chr10	23662961	.	CTTT	C	2380.96	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-5.933;DP=422;FS=3.762;HRun=13;HaplotypeScore=84.4315;InbreedingCoeff=0.9415;MQ=74.71;MQ0=3;MQRankSum=-0.703;QD=24.55;ReadPosRankSum=4.103;VQSLOD=3.1326;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,14:16:39.11:474,39,0	0/0:0,0:6:9.03:0,9,126	0/0:15,0:13:7.11:0,7,209	0/0:21,0:22:40.67:0,41,341	0/0:6,0:31:69.13:0,69,814	0/0:2,0:12:15.05:0,15,215	0/0:3,0:10:15.01:0,15,214	0/0:16,0:24:30.03:0,30,408	0/0:4,0:5:12.04:0,12,171	0/0:6,0:25:64.41:0,64,866	0/0:3,0:19:42.60:0,43,499	0/0:4,0:11:12.04:0,12,179	0/0:7,0:20:33:0,33,396	0/0:5,0:5:12.04:0,12,188	0/0:2,0:6:17.78:0,18,208	0/0:0,0:9:21.07:0,21,300	1/1:1,16:17:33.07:401,33,0	1/1:3,10:13:23.94:292,24,0	1/1:0,18:20:55.34:626,55,0	1/1:2,15:17:38.97:446,39,0	1/1:1,12:14:26.99:328,27,0	0/0:1,0:10:30.06:0,30,405	0/0:2,0:13:21.79:0,22,290	0/0:2,0:8:18.06:0,18,257	0/0:2,0:13:33.10:0,33,457	0/0:18,0:18:42.60:0,43,715	0/0:24,0:26:71.79:0,72,1149	0/0:11,0:12:25.87:0,26,364
chr10	23663641	.	GA	G	2248.70	PASS	AB=0.807;AC=13;AF=0.232;AN=56;BaseQRankSum=-6.529;DP=529;FS=3.758;HRun=10;HaplotypeScore=89.9310;InbreedingCoeff=0.7031;MQ=61.75;MQ0=11;MQRankSum=-1.864;QD=12.16;ReadPosRankSum=2.981;VQSLOD=3.6711;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,21:29:48.44:558,48,0	0/0:10,0:10:24.06:0,24,258	0/1:23,1:8:8.07:8,0,122	0/0:27,1:9:10.42:0,10,93	0/0:21,1:22:37.11:0,37,637	0/0:18,0:18:45.12:0,45,498	0/0:12,0:12:21.03:0,21,215	0/1:28,4:32:8.40:8,0,712	0/0:15,0:16:35.92:0,36,370	0/0:20,1:22:21.97:0,22,454	0/0:23,0:23:36.10:0,36,398	0/0:15,1:16:19.07:0,19,436	0/0:21,0:21:51.13:0,51,557	0/0:15,0:15:27.07:0,27,299	0/0:13,0:14:35.91:0,36,364	0/0:16,0:16:34.13:0,34,395	1/1:1,38:39:98.98:859,99,0	1/1:5,13:17:37.13:335,37,0	1/1:4,14:17:38.94:332,39,0	0/1:6,11:17:21.28:224,0,21	1/1:2,5:7:12:104,12,0	0/0:1,0:7:17.17:0,17,91	0/0:19,0:19:51.14:0,51,563	0/0:10,0:10:27.07:0,27,299	0/0:17,0:17:39.10:0,39,425	0/0:21,0:21:45.10:0,45,482	0/0:23,0:25:62.99:0,63,669	0/0:11,0:11:21.06:0,21,232
chr10	23663712	.	G	GA	1120.50	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-7.128;DP=560;FS=16.733;HRun=7;HaplotypeScore=109.2230;InbreedingCoeff=0.9802;MQ=81.76;MQ0=0;MQRankSum=-3.792;QD=32.01;ReadPosRankSum=-0.742;VQSLOD=1.8042;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,34:35:99:1215,102,0	0/0:11,0:11:30.04:0,30,290	0/0:13,0:13:24.03:0,24,231	0/0:17,0:18:27.10:0,27,300	0/0:37,0:37:99:0,102,985	0/0:20,0:20:60.10:0,60,579	0/0:21,0:21:54.08:0,54,521	0/0:35,0:35:78.12:0,78,753	0/0:21,0:21:60.10:0,60,579	0/0:18,0:18:51.08:0,51,493	0/0:16,0:16:36.05:0,36,348	0/0:19,0:19:51.08:0,51,492	0/0:19,0:19:51.08:0,51,493	0/0:16,0:16:45.07:0,45,434	0/0:16,0:16:45.07:0,45,435	0/0:13,0:13:36.06:0,36,348	0/0:33,0:33:90.14:0,90,869	0/0:14,0:14:36.05:0,36,348	0/0:25,0:25:72.11:0,72,695	0/0:16,0:16:45.07:0,45,435	0/0:7,0:7:15.01:0,15,145	0/0:13,0:13:36.05:0,36,342	0/0:21,0:21:57.06:0,57,543	0/0:17,0:17:41.80:0,42,405	0/0:16,0:16:36.05:0,36,348	0/0:23,0:23:69.11:0,69,666	0/0:23,0:23:54.08:0,54,521	0/0:24,0:24:63.03:0,63,587
chr10	23664130	.	A	AT	357.09	PASS	AC=2;AF=0.037;AN=54;BaseQRankSum=-5.670;DP=496;FS=1.148;HRun=4;HaplotypeScore=72.8592;InbreedingCoeff=0.9869;MQ=78.83;MQ0=0;MQRankSum=-1.908;QD=29.76;ReadPosRankSum=-0.114;VQSLOD=3.4990;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,12:12:33.11:451,33,0	0/0:9,0:9:27.08:0,27,306	0/0:15,0:15:39.09:0,39,431	0/0:8,0:8:18.05:0,18,199	0/0:36,0:36:99:0,105,1191	0/0:23,0:23:69.18:0,69,772	0/0:32,0:32:78.20:0,78,874	0/0:24,0:24:60.04:0,60,665	0/0:12,0:12:36.10:0,36,408	0/0:21,0:21:60.16:0,60,673	0/0:17,0:17:42.12:0,42,476	0/0:11,0:11:30.09:0,30,340	0/0:10,0:10:27.08:0,27,306	0/0:22,0:22:66.17:0,66,739	0/0:14,0:14:39.11:0,39,442	0/0:19,0:19:54.13:0,54,594	0/0:27,0:27:75.21:0,75,851	0/0:12,0:12:30.09:0,30,340	0/0:27,0:27:72.17:0,72,798	0/0:24,0:24:69.20:0,69,782	0/0:10,0:10:27.08:0,27,306	0/0:10,0:10:30.09:0,30,340	0/0:18,0:18:54.12:0,54,592	0/0:19,0:19:51.14:0,51,578	0/0:13,0:13:36.10:0,36,408	0/0:25,0:25:66.19:0,66,749	0/0:26,0:26:78.21:0,78,875	./.
chr10	23667711	.	CATAT	C	1491.60	PASS	AB=0.995;AC=31;AF=0.554;AN=56;BaseQRankSum=13.215;DP=721;FS=10.036;HRun=0;HaplotypeScore=265.4403;InbreedingCoeff=0.4367;MQ=51.52;MQ0=10;MQRankSum=1.171;QD=3.19;ReadPosRankSum=7.250;VQSLOD=0.5448;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:20.25:0,20,249	1/1:6,0:6:4.15:18,4,0	0/0:37,0:15:42.05:0,42,635	0/0:43,0:17:50.08:0,50,881	1/1:34,1:34:31.36:115,31,0	1/1:27,0:27:14.22:57,14,0	1/1:30,0:30:23.05:87,23,0	0/1:29,1:30:78.63:79,0,147	1/1:24,0:24:0.65:76,1,0	1/1:37,0:37:24.30:231,24,0	1/1:23,0:23:11.12:71,11,0	1/1:18,0:18:5.77:51,6,0	0/1:22,0:22:7.12:73,0,7	1/1:22,0:22:11.24:70,11,0	1/1:18,0:18:18.71:88,19,0	0/1:26,0:26:25.04:73,0,25	0/0:21,0:21:46.99:0,47,485	0/0:12,0:12:27.72:0,28,302	0/0:17,0:16:33.53:0,34,348	0/0:32,0:32:38.39:0,38,827	0/0:37,0:35:59.49:0,59,877	1/1:3,21:24:13.10:246,13,0	0/1:27,0:26:11.15:111,0,11	0/1:25,0:25:33.09:62,0,33	1/1:21,0:21:15.94:61,16,0	0/1:32,0:32:99:118,0,112	0/0:19,0:18:11.29:0,11,161	0/1:21,0:21:5.83:6,0,22
chr10	23667715	.	TAC	T	9334.32	PASS	AB=0.978;AC=48;AF=0.857;AN=56;BaseQRankSum=6.565;DP=705;FS=13.629;HRun=0;HaplotypeScore=215.3658;InbreedingCoeff=0.3771;MQ=51.14;MQ0=10;MQRankSum=0.614;QD=14.70;ReadPosRankSum=3.686;VQSLOD=3.4380;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:14,1:34:2.69:0,3,14	1/1:2,4:6:12.04:145,12,0	0/0:36,0:14:21.03:0,21,267	0/1:42,2:18:4.19:4,0,347	1/1:7,23:33:65.77:775,66,0	1/1:10,15:27:41.96:481,42,0	1/1:12,16:29:50.34:571,50,0	1/1:16,10:29:41.73:429,42,0	1/1:4,20:25:45.10:528,45,0	1/1:6,28:35:70.26:1014,70,0	1/1:5,16:22:41.92:469,42,0	1/1:5,11:17:23.66:264,24,0	1/1:5,15:21:38.96:471,39,0	1/1:3,10:20:35.61:376,36,0	1/1:6,11:18:35.75:377,36,0	1/1:4,19:24:45.14:544,45,0	0/1:20,1:21:21.81:48,0,22	0/1:14,0:14:67.39:79,0,67	1/1:14,3:16:24.94:190,25,0	0/1:30,0:30:27.53:42,0,28	1/1:36,1:35:7.90:234,8,0	1/1:22,0:24:13.86:68,14,0	1/1:3,22:26:59.74:681,60,0	1/1:5,18:25:45.64:556,46,0	1/1:3,16:19:33.10:399,33,0	1/1:1,0:30:69.98:337,70,0	1/1:3,0:18:17.04:85,17,0	1/1:0,0:21:34.09:168,34,0
chr10	23668478	.	AAAATAAAT	A	4093.53	PASS	AB=0.857;AC=31;AF=0.646;AN=48;BaseQRankSum=0.586;DP=298;FS=13.582;HRun=0;HaplotypeScore=94.7717;InbreedingCoeff=0.6843;MQ=45.56;MQ0=15;MQRankSum=-3.278;QD=24.66;ReadPosRankSum=1.727;VQSLOD=2.1850;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:17:15.05:0,15,497	1/1:3,1:4:9.03:155,9,0	./.	./.	1/1:11,3:14:6.02:124,6,0	1/1:4,11:14:27.05:631,27,0	0/0:8,0:8:0.47:0,0,1	1/1:19,2:14:9.02:179,9,0	1/1:8,4:11:21.06:418,21,0	1/1:5,5:10:18.06:394,18,0	1/1:6,7:13:17.93:260,18,0	1/1:6,1:7:3.01:76,3,0	1/1:4,1:5:3.01:76,3,0	1/1:4,3:7:6.02:153,6,0	1/1:6,4:9:15.05:346,15,0	1/1:6,2:8:9.03:201,9,0	0/0:15,0:15:12.04:0,12,356	0/0:6,0:5:6.02:0,6,149	0/0:14,0:13:21.07:0,21,698	0/0:7,0:8:9.02:0,9,151	./.	1/1:2,2:4:5.99:97,6,0	1/1:11,6:17:21.03:471,21,0	./.	1/1:5,8:13:23.99:448,24,0	0/1:2,1:6:64.38:64,0,294	0/0:6,0:13:12.04:0,12,368	0/0:9,0:22:36.12:0,36,1249
chr10	23668504	.	A	AG	722.45	PASS	AB=0.944;AC=15;AF=0.278;AN=54;BaseQRankSum=5.720;DP=280;FS=13.650;HRun=0;HaplotypeScore=95.9432;InbreedingCoeff=-0.4072;MQ=51.27;MQ0=1;MQRankSum=-6.345;QD=4.41;ReadPosRankSum=5.663;VQSLOD=2.1557;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:20.99:0,21,205	0/1:6,2:8:82.95:83,0,185	0/0:3,0:2:5.88:0,6,47	0/0:4,0:2:3.01:0,3,33	0/1:12,1:13:26.81:27,0,366	0/1:18,0:16:59.85:60,0,267	0/0:1,0:1:3.01:0,3,42	0/1:17,1:18:55.55:56,0,535	0/1:8,4:11:96.30:156,0,96	0/1:11,0:11:98.08:98,0,177	0/1:15,1:16:35.66:36,0,442	0/1:2,0:2:6.88:7,0,36	0/1:3,0:3:6.94:7,0,75	0/1:7,0:7:9.47:9,0,145	0/1:9,1:9:99:109,0,141	0/1:8,0:8:52.03:52,0,125	0/0:17,0:14:39.06:0,39,500	0/0:6,0:4:1.64:0,2,116	0/0:11,0:10:30.05:0,30,392	0/0:7,0:7:18.05:0,18,234	0/0:3,0:3:9.01:0,9,107	0/1:5,0:5:0.36:0,0,139	0/1:11,1:12:86.32:86,0,136	./.	0/1:20,1:21:79.62:80,0,438	0/0:7,0:7:8.12:0,8,199	0/0:15,0:15:26.93:0,27,314	0/0:29,0:26:53.71:0,54,557
chr10	23668514	.	AT	A	7549.27	PASS	AB=0.944;AC=46;AF=0.821;AN=56;BaseQRankSum=2.564;DP=305;FS=11.883;HRun=4;HaplotypeScore=80.7395;InbreedingCoeff=0.6540;MQ=58.59;MQ0=0;MQRankSum=-3.264;QD=31.32;ReadPosRankSum=0.237;VQSLOD=4.3721;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:4.93:0,5,114	1/1:0,6:6:18.06:215,18,0	0/0:6,0:5:12.03:0,12,151	0/1:5,0:3:6.51:7,0,75	1/1:0,14:14:39.12:466,39,0	1/1:0,20:19:57.17:675,57,0	1/1:0,2:2:6.02:72,6,0	1/1:0,24:25:75.22:886,75,0	1/1:0,8:8:21.06:251,21,0	1/1:0,13:13:37.93:435,38,0	1/1:0,15:15:45.14:537,45,0	1/1:0,3:3:9.03:108,9,0	1/1:0,3:3:9.03:108,9,0	1/1:0,8:8:21.06:251,21,0	1/1:0,10:10:29.88:336,30,0	1/1:0,8:8:24.07:287,24,0	1/1:0,15:13:38.26:420,38,0	1/1:1,6:6:18.06:215,18,0	1/1:0,12:13:38.33:438,38,0	1/1:0,7:7:21.06:252,21,0	1/1:0,4:4:12.04:144,12,0	1/1:0,7:7:18.06:215,18,0	1/1:0,13:13:36.11:430,36,0	1/1:0,1:1:3.01:36,3,0	1/1:0,24:24:63.19:753,63,0	0/1:7,1:8:14.18:14,0,52	0/0:17,0:17:14.19:0,14,125	0/0:25,0:25:48.45:0,48,250
chr10	23669731	.	AT	A	12388.72	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=2.620;DP=549;FS=5.693;HRun=8;HaplotypeScore=56.6542;InbreedingCoeff=0.9849;MQ=72.31;MQ0=0;MQRankSum=-6.258;QD=24.29;ReadPosRankSum=2.742;VQSLOD=5.6761;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:42.13:0,42,507	1/1:0,8:8:21.03:203,21,0	0/0:6,0:6:15.04:0,15,171	0/0:17,0:17:39.09:0,39,451	1/1:4,30:34:78.12:753,78,0	1/1:3,21:24:54.08:521,54,0	1/1:4,9:13:21.03:203,21,0	1/1:2,18:20:54.08:521,54,0	1/1:2,17:19:42.06:406,42,0	1/1:4,28:32:84.08:801,84,0	1/1:1,26:27:72.11:694,72,0	1/1:1,17:18:39.06:377,39,0	1/1:0,14:14:30.05:290,30,0	1/1:3,16:19:47.10:441,47,0	1/1:0,10:10:30.05:290,30,0	1/1:0,25:25:69.11:666,69,0	1/1:3,16:19:48.07:464,48,0	1/1:1,6:7:14.81:145,15,0	1/1:1,11:12:33.05:318,33,0	1/1:1,30:31:84.12:811,84,0	1/1:0,25:25:75.12:724,75,0	1/1:2,20:22:57.09:548,57,0	1/1:4,28:32:78.11:751,78,0	1/1:1,17:18:45.07:435,45,0	1/1:2,19:21:57.09:550,57,0	1/1:1,16:17:44.96:434,45,0	1/1:1,23:24:69.11:666,69,0	1/1:0,19:19:39.06:377,39,0
chr10	23669933	.	AT	A	10830.80	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-3.332;DP=536;FS=4.294;HRun=7;HaplotypeScore=199.1500;InbreedingCoeff=0.9908;MQ=73.83;MQ0=0;MQRankSum=-4.424;QD=26.55;ReadPosRankSum=1.301;VQSLOD=2.3634;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:60.15:0,60,736	1/1:0,6:6:18.04:184,18,0	0/0:10,0:10:27.08:0,27,330	0/0:23,0:23:54.11:0,54,620	1/1:0,20:20:45.09:459,45,0	1/1:1,15:16:42.10:428,42,0	1/1:0,26:26:78.18:795,78,0	1/1:1,24:25:72.16:734,72,0	1/1:0,21:21:63.14:642,63,0	1/1:0,23:23:69.11:685,69,0	1/1:1,24:25:63.13:641,63,0	1/1:1,13:14:33.07:336,33,0	1/1:1,19:20:51.12:520,51,0	1/1:0,27:27:75.17:765,75,0	1/1:2,18:20:42.09:428,42,0	1/1:0,14:14:42.10:428,42,0	1/1:0,15:15:45.10:459,45,0	1/1:0,8:8:24.05:245,24,0	1/1:2,18:20:54.12:551,54,0	1/1:3,23:26:63.13:642,63,0	1/1:3,10:13:18.03:184,18,0	1/1:0,19:19:48.10:489,48,0	1/1:2,20:22:48.10:489,48,0	1/1:0,9:9:16.13:207,16,0	1/1:1,18:19:51.11:520,51,0	0/0:16,1:17:17.51:0,18,506	0/0:40,0:40:99:0,102,1256	0/0:11,0:11:21.07:0,21,264
chr10	23669951	.	A	ACATGCACCCTTAG	64062.55	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=0.029;DP=659;FS=8.975;HRun=0;HaplotypeScore=266.5089;InbreedingCoeff=0.9883;MQ=67.95;MQ0=0;MQRankSum=-7.910;QD=102.34;ReadPosRankSum=2.800;VQSLOD=3.2163;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:14,10:37:39.13:2161,39,0	1/1:10,0:10:30.04:1333,30,0	0/0:14,0:14:27.09:0,27,709	0/0:19,0:19:35.26:0,35,971	1/1:32,0:32:62.94:2771,63,0	1/1:20,0:20:51.16:2547,51,0	1/1:34,0:34:75.02:2586,75,0	1/1:28,0:28:72.23:2797,72,0	1/1:27,0:26:75.12:2896,75,0	1/1:31,0:31:75.25:4293,75,0	1/1:30,0:30:62.59:2223,63,0	1/1:22,0:22:60.10:2411,60,0	1/1:19,0:19:54.07:2600,54,0	1/1:31,0:31:67.02:3274,67,0	1/1:24,0:25:63.10:3139,63,0	1/1:17,0:17:33.11:1798,33,0	1/1:23,1:24:51.08:1946,51,0	1/1:9,4:13:30.10:1606,30,0	1/1:12,7:19:48.15:2337,48,0	1/1:12,17:36:69.19:3762,69,0	1/1:9,2:10:20.99:895,21,0	1/1:26,0:26:59.99:2779,60,0	1/1:25,0:25:47.97:2185,48,0	1/1:10,0:11:18.01:635,18,0	1/1:22,0:22:60.14:2820,60,0	1/1:7,6:23:53.53:2880,54,0	1/1:14,15:41:87.18:4407,87,0	1/1:5,2:12:18.06:980,18,0
chr10	23669960	.	C	CT	4854.30	PASS	AB=0.838;AC=28;AF=0.500;AN=56;BaseQRankSum=18.407;DP=659;FS=7.852;HRun=1;HaplotypeScore=307.3667;InbreedingCoeff=-0.7101;MQ=71.26;MQ0=0;MQRankSum=-9.619;QD=7.82;ReadPosRankSum=7.763;VQSLOD=1.7091;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:39,0:39:99:156,0,151	0/1:8,3:11:99:102,0,146	0/0:16,0:16:41.95:0,42,480	0/0:22,0:22:50.89:0,51,621	0/1:19,14:33:99:178,0,359	0/1:12,10:22:99:221,0,213	0/1:27,6:33:99:290,0,325	0/1:30,0:30:99:325,0,269	0/1:19,7:25:99:316,0,212	0/1:19,10:29:99:268,0,374	0/1:22,10:32:99:163,0,333	0/1:19,6:25:99:151,0,418	1/1:7,12:19:17.57:325,18,0	0/1:16,12:28:99:276,0,204	0/1:15,11:26:99:217,0,222	0/1:12,5:17:99:135,0,140	0/1:22,0:22:99:129,0,179	0/1:11,0:11:16.37:16,0,166	0/1:16,0:16:44.29:44,0,217	0/1:36,0:36:1.47:246,0,1	0/1:10,0:9:27.10:27,0,167	0/1:17,9:26:99:179,0,326	0/1:11,13:24:99:206,0,167	0/1:8,3:11:37:37,0,140	0/1:12,11:23:99:284,0,163	0/1:22,1:23:97.49:97,0,186	1/1:40,0:40:2.11:356,2,0	0/1:9,0:9:18.06:109,0,18
chr10	23669962	.	A	AGCATGCACCCTC	33808.33	PASS	AB=0.994;AC=44;AF=0.786;AN=56;BaseQRankSum=3.923;DP=525;FS=1.553;HRun=0;HaplotypeScore=214.3657;InbreedingCoeff=0.1465;MQ=77.06;MQ0=0;MQRankSum=-9.072;QD=69.14;ReadPosRankSum=8.049;VQSLOD=4.3124;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:31,0:31:99:785,0,162	1/1:5,3:8:23.87:615,24,0	0/0:16,0:16:38.14:0,38,941	0/0:20,0:20:44.28:0,44,996	1/1:17,14:31:65.47:1844,65,0	1/1:8,10:18:53.75:1640,54,0	1/1:15,6:21:61.88:1194,62,0	1/1:15,0:15:35.76:305,36,0	1/1:9,7:16:47.89:1438,48,0	1/1:14,10:24:72:2085,72,0	1/1:15,10:25:59.58:1492,60,0	1/1:19,6:25:49:1407,49,0	1/1:2,11:14:23.53:2003,24,0	1/1:11,12:23:46.03:2273,46,0	1/1:12,11:23:66.18:2329,66,0	1/1:6,5:11:32.99:991,33,0	0/1:14,0:14:99:127,0,110	0/1:9,0:9:37.41:489,0,37	0/1:15,0:15:84.33:854,0,84	0/1:30,0:30:33.52:2103,0,34	0/1:11,0:10:46.44:389,0,46	1/1:15,9:24:41.08:1606,41,0	1/1:6,13:19:48.09:1695,48,0	1/1:8,3:11:8.01:457,8,0	1/1:7,11:18:53.93:1889,54,0	0/1:18,1:19:16.11:1258,0,16	1/1:29,0:29:35.21:2296,35,0	0/1:5,0:5:14.97:244,0,15
chr10	23670568	.	AG	A	1471.28	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=3.617;DP=616;FS=2.903;HRun=1;HaplotypeScore=98.2622;InbreedingCoeff=0.9831;MQ=62.88;MQ0=1;MQRankSum=-0.689;QD=33.44;ReadPosRankSum=0.152;VQSLOD=3.3833;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,138,2177	0/0:6,0:6:15.05:0,15,240	0/0:21,0:16:42.10:0,42,618	0/0:24,0:24:60.17:0,60,911	0/0:27,0:27:72.23:0,72,1128	0/0:16,0:16:45.14:0,45,694	0/0:18,0:18:54.18:0,54,850	0/0:23,0:23:66.23:0,66,1056	0/0:18,0:18:54.17:0,54,837	0/0:12,0:12:36.12:0,36,553	0/0:18,0:18:51.16:0,51,788	0/0:27,0:27:81.20:0,81,1241	0/0:17,0:17:51.17:0,51,805	0/0:14,0:14:42.13:0,42,645	0/0:20,0:20:60.17:0,60,912	0/0:28,0:28:84.25:0,84,1292	0/0:27,0:27:81.28:0,81,1282	0/0:38,0:38:99:0,108,1691	0/0:21,0:21:60.20:0,60,959	0/0:27,0:27:78.23:0,78,1199	0/0:46,0:46:99:0,138,2176	0/0:19,0:19:57.18:0,57,888	0/0:16,0:16:45.15:0,45,712	0/0:31,0:31:90.31:0,90,1436	0/0:11,0:11:33.11:0,33,527	1/1:0,14:14:42.12:567,42,0	1/1:0,24:24:63.21:881,63,0	1/1:0,6:6:12.04:163,12,0
chr10	23670864	.	CTG	C	391.70	PASS	AB=0.857;AC=12;AF=0.240;AN=50;BaseQRankSum=-1.675;DP=426;FS=8.539;HRun=0;HaplotypeScore=84.6291;InbreedingCoeff=0.1465;MQ=51.83;MQ0=22;MQRankSum=1.902;QD=3.08;ReadPosRankSum=-0.090;VQSLOD=1.2023;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:31:0.26:0,0,344	0/0:4,0:4:2.98:0,3,22	./.	./.	0/0:10,0:14:6.01:0,6,69	0/0:10,0:14:6.01:0,6,70	0/0:16,0:16:13.72:0,14,114	0/0:35,0:33:6.55:0,7,44	0/0:6,0:12:5.30:0,5,36	0/0:12,0:10:14.96:0,15,131	0/0:13,0:12:10.87:0,11,72	0/0:5,0:7:5.79:0,6,37	0/0:13,0:12:3.18:0,3,42	0/1:13,1:13:24.45:24,0,38	0/0:9,0:9:5.63:0,6,29	./.	1/1:11,2:14:1.30:134,1,0	1/1:9,0:9:3:28,3,0	0/1:14,0:14:0.07:7,0,0	0/0:15,5:19:0.89:0,1,2	0/1:24,6:28:11.85:87,0,12	0/0:16,0:16:12:0,12,116	0/1:7,0:11:0:0,0,0	0/0:23,0:21:7.52:0,8,48	0/0:9,0:13:2.74:0,3,12	0/1:6,8:14:13.82:178,0,14	0/1:10,5:15:11.55:27,0,12	1/1:4,0:3:2.93:29,3,0
chr10	23671142	.	GAAA	G	11284.46	PASS	AB=0.952;AC=53;AF=0.946;AN=56;BaseQRankSum=-5.291;DP=542;FS=16.867;HRun=14;HaplotypeScore=94.7986;InbreedingCoeff=0.6101;MQ=69.34;MQ0=3;MQRankSum=-2.344;QD=21.37;ReadPosRankSum=3.274;VQSLOD=2.2216;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,19:23:42.02:491,42,0	1/1:0,8:8:21.02:245,21,0	0/0:14,0:8:11.99:0,12,117	0/1:18,0:15:16.91:17,0,204	1/1:5,16:21:45.07:526,45,0	1/1:5,22:27:63.07:719,63,0	1/1:6,10:22:35.88:379,36,0	1/1:9,22:32:55.46:663,55,0	1/1:3,15:19:35.95:404,36,0	1/1:4,21:25:60.08:697,60,0	1/1:3,11:15:33:368,33,0	1/1:2,16:18:48.09:559,48,0	1/1:2,10:13:30.02:333,30,0	1/1:2,14:18:43.60:506,44,0	1/1:5,16:22:45.02:509,45,0	1/1:2,22:27:64.56:734,65,0	1/1:1,18:22:48.18:573,48,0	1/1:2,9:13:21.15:275,21,0	1/1:5,12:18:34.59:417,35,0	1/1:6,15:23:37.46:436,37,0	1/1:4,10:15:18.84:241,19,0	1/1:3,17:21:45.01:509,45,0	1/1:1,7:8:17.97:192,18,0	1/1:1,6:7:15.01:175,15,0	1/1:4,10:14:24:280,24,0	1/1:8,0:36:85.27:517,85,0	1/1:5,0:29:55.79:338,56,0	1/1:0,0:10:29.42:178,29,0
chr10	23672957	.	T	TG	606.05	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-0.233;DP=755;FS=4.248;HRun=6;HaplotypeScore=85.6718;InbreedingCoeff=0.9995;MQ=77.38;MQ0=0;MQRankSum=-3.194;QD=26.35;ReadPosRankSum=-0.919;VQSLOD=3.4791;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,15:23:58.41:701,58,0	0/0:16,0:16:48.11:0,48,490	0/0:37,0:29:40.66:0,41,569	0/0:29,0:26:44.23:0,44,411	0/0:39,0:39:99:0,111,1132	0/0:24,0:24:54.11:0,54,550	0/0:19,0:19:48.09:0,48,483	0/0:32,0:32:75.15:0,75,759	0/0:27,0:27:79.42:0,79,798	0/0:35,0:35:93.19:0,93,938	0/0:28,0:28:75.14:0,75,752	0/0:20,0:20:54.12:0,54,550	0/0:23,0:23:57.13:0,57,582	0/0:14,0:14:36.08:0,36,367	0/0:29,0:29:75.16:0,75,765	0/0:35,0:35:90.18:0,90,911	0/0:22,0:22:50.68:0,51,520	0/0:20,0:20:42.31:0,42,497	0/0:21,0:21:48.09:0,48,483	0/0:41,0:41:99:0,114,1156	0/0:15,0:15:33.06:0,33,329	0/0:23,0:23:60.13:0,60,612	0/0:29,0:29:63.59:0,64,636	0/0:24,0:24:72.16:0,72,734	0/0:32,0:32:81.17:0,81,826	0/0:37,0:37:99:0,102,1041	0/0:41,0:41:99:0,117,1177	0/0:16,0:16:48.11:0,48,490
chr10	23673204	.	A	ACAGAC	2974.28	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-5.080;DP=796;FS=0.652;HRun=0;HaplotypeScore=157.4022;InbreedingCoeff=0.9955;MQ=70.79;MQ0=4;MQRankSum=-1.374;QD=57.20;ReadPosRankSum=1.951;VQSLOD=4.4003;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,48:52:76.37:3069,76,0	0/0:11,0:11:33.10:0,33,720	0/0:39,0:25:66.67:0,67,1264	0/0:58,0:48:95.17:0,95,1991	0/0:25,0:25:75.23:0,75,1540	0/0:26,0:26:77.88:0,78,1663	0/0:28,0:28:84.29:0,84,1916	0/0:33,0:33:99:0,99,1940	0/0:22,0:23:66.18:0,66,1334	0/0:36,0:36:99:0,108,2413	0/0:28,0:28:78.27:0,78,1700	0/0:17,0:17:48.16:0,48,1087	0/0:39,0:39:99:0,114,2589	0/0:23,0:23:66.22:0,66,1433	0/0:34,0:34:99:0,99,2163	0/0:23,0:23:69.24:0,69,1495	0/0:35,0:35:99:0,102,2050	0/0:15,0:15:21.49:0,21,797	0/0:12,0:12:36.12:0,36,778	0/0:26,0:26:75.26:0,75,1663	0/0:29,0:28:78.22:0,78,1703	0/0:22,0:22:66.23:0,66,1509	0/0:17,0:17:51.17:0,51,1160	0/0:30,0:30:76.44:0,76,1607	0/0:28,0:28:81.27:0,81,1722	0/0:41,0:41:99:0,123,2476	0/0:34,0:34:99:0,102,2161	0/0:10,0:10:30.10:0,30,699
chr10	23674073	.	TA	T	9357.27	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-6.877;DP=472;FS=1.667;HRun=3;HaplotypeScore=67.3004;InbreedingCoeff=0.9788;MQ=91.62;MQ0=0;MQRankSum=-3.602;QD=31.51;ReadPosRankSum=5.622;VQSLOD=4.7761;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:55.54:0,56,362	1/1:0,14:14:30.10:386,30,0	0/0:24,0:24:40:0,40,638	0/0:23,0:23:21.57:0,22,635	1/1:0,22:22:54.06:648,54,0	1/1:0,26:26:66.21:854,66,0	1/1:1,16:17:24.70:539,25,0	1/1:1,23:24:66.15:769,66,0	1/1:1,18:19:51.17:658,51,0	1/1:0,14:14:42.07:462,42,0	1/1:0,19:19:48.15:607,48,0	1/1:0,16:16:33.11:426,33,0	1/1:0,21:21:54.17:696,54,0	1/1:0,21:21:48.16:621,48,0	1/1:0,15:15:42.14:544,42,0	1/1:0,13:13:26.96:349,27,0	0/0:21,0:21:62.92:0,63,536	0/0:8,0:8:24:0,24,220	0/0:10,0:10:25.50:0,25,256	0/0:23,0:23:60.82:0,61,538	0/0:17,0:17:47.99:0,48,418	1/1:0,13:13:33.11:427,33,0	1/1:0,14:14:39.13:505,39,0	1/1:2,9:11:33.08:398,33,0	1/1:0,18:18:36.12:466,36,0	0/0:5,0:5:12.01:0,12,121	0/0:21,0:21:53.69:0,54,472	0/0:3,0:3:5.99:0,6,50
chr10	23674075	.	A	AG	2141.84	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-7.676;DP=495;FS=3.625;HRun=8;HaplotypeScore=104.4416;InbreedingCoeff=0.9569;MQ=90.36;MQ0=0;MQRankSum=-2.065;QD=18.46;ReadPosRankSum=-1.435;VQSLOD=2.8156;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:20:24.44:0,24,72	0/0:14,0:14:25.74:0,26,96	0/0:23,0:23:41.37:0,41,383	0/0:21,0:21:20.59:0,21,320	0/0:23,0:23:41.92:0,42,162	0/0:27,0:27:59.91:0,60,237	0/0:17,0:17:39.22:0,39,157	0/0:32,0:32:44.68:0,45,180	0/0:18,0:18:43.26:0,43,162	0/0:15,0:15:20.52:0,21,77	0/0:19,0:19:38.22:0,38,141	0/0:17,0:17:31.45:0,31,131	0/0:21,0:21:46.07:0,46,172	0/0:22,0:22:44.43:0,44,179	0/0:17,0:17:39.33:0,39,160	0/0:13,0:13:14.57:0,15,67	1/1:1,19:20:57.17:658,57,0	1/1:2,6:8:18.05:208,18,0	1/1:4,1:9:14.41:93,14,0	1/1:5,18:23:51.15:587,51,0	1/1:0,17:17:48.14:554,48,0	0/0:14,0:14:30.10:0,30,123	0/0:14,0:14:33.75:0,34,127	0/0:11,0:11:22.97:0,23,86	0/0:21,0:21:34.13:0,34,139	1/1:7,0:7:7.06:36,7,0	1/1:19,0:27:28.83:166,29,0	1/1:5,0:5:5.91:40,6,0
chr10	23674310	.	AGT	A	176.26	PASS	AB=0.935;AC=4;AF=0.071;AN=56;BaseQRankSum=5.281;DP=570;FS=0.000;HRun=0;HaplotypeScore=69.0833;InbreedingCoeff=0.5684;MQ=70.34;MQ0=0;MQRankSum=-0.930;QD=4.10;ReadPosRankSum=-0.043;VQSLOD=1.9962;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,10:14:21.07:268,21,0	0/0:6,0:6:18.06:0,18,298	0/0:20,0:18:36.73:0,37,559	0/0:23,0:23:52.32:0,52,765	0/0:42,0:42:99:0,120,1979	0/0:25,0:25:66.23:0,66,1104	0/0:6,0:6:15.05:0,15,234	0/0:27,0:27:57.19:0,57,948	0/0:18,0:18:54.18:0,54,900	0/0:28,0:28:60.21:0,60,1000	0/0:25,0:25:72.25:0,72,1200	0/1:13,1:14:2.08:2,0,516	0/0:21,0:21:51.16:0,51,828	0/0:27,1:28:72.25:0,72,1200	0/0:24,0:24:63.22:0,63,1054	0/0:16,0:16:42.14:0,42,703	0/0:19,1:20:12.94:0,13,730	0/0:18,0:18:36.12:0,36,588	0/0:24,0:23:54.18:0,54,902	0/0:27,1:28:34.04:0,34,1113	0/0:10,0:10:18.06:0,18,301	0/0:16,0:16:39.10:0,39,578	0/0:20,0:20:57.19:0,57,954	0/0:12,0:12:30.10:0,30,502	0/0:17,0:17:45.15:0,45,753	0/0:20,0:20:57.19:0,57,948	0/0:33,0:33:58.37:0,58,1517	0/1:14,1:15:2.10:2,0,488
chr10	23675092	.	A	AT	6396.90	PASS	AC=42;AF=0.778;AN=54;BaseQRankSum=-10.262;DP=319;FS=3.269;HRun=8;HaplotypeScore=36.4149;InbreedingCoeff=0.8928;MQ=72.73;MQ0=0;MQRankSum=1.221;QD=26.77;ReadPosRankSum=0.363;VQSLOD=5.1164;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:23:28.53:0,29,89	1/1:2,4:6:9.03:104,9,0	0/0:7,0:7:15.01:0,15,137	0/0:9,0:9:11.05:0,11,117	1/1:4,19:23:54.08:594,54,0	1/1:0,15:15:42.12:485,42,0	1/1:0,3:3:9.03:104,9,0	1/1:6,24:30:72.20:820,72,0	1/1:3,10:13:24.07:277,24,0	1/1:4,10:13:30.09:345,30,0	1/1:2,14:16:36.06:393,36,0	1/1:0,5:5:15.04:173,15,0	1/1:1,5:6:12.04:138,12,0	1/1:0,5:5:15.04:173,15,0	1/1:2,12:14:33.10:381,33,0	1/1:0,5:5:15.04:173,15,0	1/1:1,14:15:39.12:450,39,0	1/1:0,13:13:30.09:346,30,0	1/1:1,14:15:45.13:509,45,0	1/1:1,12:13:24.07:276,24,0	1/1:2,0:2:3.01:34,3,0	./.	1/1:2,6:8:18.05:208,18,0	1/1:1,4:5:12.04:138,12,0	1/1:3,10:13:24.07:277,24,0	0/0:16,1:17:16.41:0,16,404	0/0:19,0:19:57.03:0,57,521	0/0:5,0:5:9:0,9,82
chr10	23675145	.	A	AT	1009.66	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=0.924;DP=356;FS=12.876;HRun=7;HaplotypeScore=55.6094;InbreedingCoeff=0.9432;MQ=76.74;MQ0=3;MQRankSum=-1.126;QD=24.63;ReadPosRankSum=2.328;VQSLOD=3.2957;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:38.58:0,39,345	0/0:5,0:5:12.02:0,12,116	0/0:29,0:18:31.60:0,32,286	0/0:15,0:10:12.20:0,12,157	0/0:14,0:14:36.05:0,36,348	0/0:9,0:9:27.03:0,27,256	0/0:8,0:8:21.03:0,21,203	0/0:34,0:34:90.10:0,90,856	0/0:11,0:11:24.03:0,24,231	0/0:8,0:8:24.04:0,24,232	0/0:10,0:10:30.03:0,30,283	0/0:8,0:8:24.04:0,24,232	0/0:11,0:11:27.04:0,27,261	0/0:8,0:8:24.03:0,24,226	0/0:11,0:11:33.04:0,33,315	0/0:8,0:8:24.04:0,24,232	0/0:24,0:24:44.85:0,45,545	0/0:15,0:15:19.15:0,19,225	0/0:12,0:12:30.04:0,30,290	0/0:14,0:14:42.07:0,42,405	0/0:6,0:6:18.02:0,18,170	0/0:4,0:4:12.02:0,12,116	0/0:9,0:9:27.04:0,27,261	0/0:11,0:11:30.03:0,30,283	0/0:14,0:14:36.04:0,36,341	1/1:3,15:18:19.15:502,19,0	1/1:3,14:17:42.13:507,42,0	1/1:1,5:6:12.03:138,12,0
chr10	23675309	.	TC	T	412.93	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.458;DP=304;FS=11.459;HRun=5;HaplotypeScore=34.4016;InbreedingCoeff=0.7699;MQ=72.67;MQ0=0;MQRankSum=-2.522;QD=24.29;ReadPosRankSum=-0.221;VQSLOD=1.5248;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,15:17:45.13:508,45,0	0/0:8,0:8:24.08:0,24,328	0/0:14,0:14:22.63:0,23,397	0/0:8,0:8:10.06:0,10,269	0/0:17,0:17:45.13:0,45,598	0/0:7,0:7:18.06:0,18,246	0/0:12,0:12:27.06:0,27,336	0/0:16,0:16:39.12:0,39,520	0/0:12,0:12:36.12:0,36,492	0/0:7,0:7:21.06:0,21,272	0/0:20,0:20:57.18:0,57,758	0/0:15,0:15:42.14:0,42,573	0/0:15,0:15:39.12:0,39,518	0/0:15,0:15:39.08:0,39,511	0/0:6,0:6:18.06:0,18,246	0/0:16,0:16:45.15:0,45,614	0/0:11,0:11:27.09:0,27,358	0/0:8,0:8:21.07:0,21,287	0/0:9,0:9:24.08:0,24,327	0/0:6,0:6:18.06:0,18,246	0/0:9,0:9:21.07:0,21,287	0/0:6,0:6:18.06:0,18,246	0/0:8,0:8:18.06:0,18,246	0/0:9,0:9:27.09:0,27,369	0/0:6,0:6:18.05:0,18,231	0/0:13,0:13:39.13:0,39,534	0/0:12,0:12:24.08:0,24,328	0/0:2,0:2:3.01:0,3,41
chr10	23675348	.	T	TC	788.35	PASS	AB=0.783;AC=14;AF=0.250;AN=56;BaseQRankSum=-0.807;DP=313;FS=6.334;HRun=9;HaplotypeScore=39.4318;InbreedingCoeff=0.6925;MQ=71.80;MQ0=0;MQRankSum=-0.786;QD=11.94;ReadPosRankSum=-1.608;VQSLOD=1.7473;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:22:25.99:0,26,76	0/0:8,0:8:17.97:0,18,156	0/0:6,0:6:4.81:0,5,31	0/0:7,0:6:1.81:0,2,5	0/0:19,0:19:53.99:0,54,469	0/0:6,0:6:18:0,18,156	0/0:14,0:14:35.97:0,36,312	0/0:14,0:14:26.98:0,27,234	0/0:12,0:12:20.96:0,21,182	0/0:9,0:9:26.99:0,27,234	0/0:17,0:17:44.96:0,45,387	0/0:16,0:16:38.95:0,39,335	0/0:11,0:11:8.92:0,9,78	0/0:13,0:13:26.94:0,27,232	0/0:10,0:10:20.96:0,21,182	0/0:21,0:21:41.93:0,42,365	1/1:0,6:6:6.02:66,6,0	0/1:3,3:6:14.02:88,0,14	1/1:1,5:6:12.03:133,12,0	1/1:1,7:8:21.02:219,21,0	1/1:5,12:17:30.08:331,30,0	0/0:9,0:9:23.99:0,24,208	0/0:5,0:5:15:0,15,130	0/0:19,0:19:41.98:0,42,364	0/0:8,0:8:24:0,24,208	0/1:8,0:9:10.58:11,0,20	1/1:1,1:13:14.45:93,14,0	1/1:1,0:1:2.99:24,3,0
chr10	23676152	.	CTT	C	14649.40	PASS	AB=1.000;AC=35;AF=0.625;AN=56;BaseQRankSum=12.844;DP=561;FS=1.431;HRun=2;HaplotypeScore=72.9587;InbreedingCoeff=0.9204;MQ=72.63;MQ0=1;MQRankSum=-0.410;QD=42.22;ReadPosRankSum=4.111;VQSLOD=4.8826;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:63.16:0,63,1215	1/1:0,11:11:30.10:489,30,0	0/0:8,0:8:13.47:0,13,273	0/1:8,0:8:17.62:18,0,278	1/1:0,37:37:99:1664,102,0	1/1:0,23:23:63.22:1028,63,0	1/1:0,12:12:33.11:538,33,0	1/1:0,25:25:75.18:1081,75,0	1/1:0,23:23:54.18:880,54,0	1/1:0,25:25:72.22:1123,72,0	1/1:0,26:26:63.22:1027,63,0	1/1:0,13:13:36.12:587,36,0	1/1:0,15:15:39.13:636,39,0	1/1:0,26:26:66.23:1076,66,0	1/1:0,22:22:63.22:1028,63,0	1/1:0,8:8:18.06:294,18,0	0/0:22,0:22:60.21:0,60,1218	0/0:11,0:11:33.11:0,33,670	0/0:25,0:25:75.26:0,75,1501	0/0:30,0:30:90.31:0,90,1819	0/0:23,0:23:69.23:0,69,1367	1/1:0,27:27:72.25:1174,72,0	1/1:0,19:18:45.05:734,45,0	1/1:0,13:13:36.12:587,36,0	1/1:0,14:14:42.14:685,42,0	0/0:30,1:31:44.36:0,44,1773	0/0:29,0:29:87.30:0,87,1741	0/0:13,0:13:39.13:0,39,778
chr10	23676259	.	A	ATT	731.62	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-0.185;DP=557;FS=0.000;HRun=7;HaplotypeScore=63.3234;InbreedingCoeff=0.9769;MQ=67.45;MQ0=0;MQRankSum=-3.473;QD=40.65;ReadPosRankSum=0.268;VQSLOD=2.9726;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,17:18:51.17:826,51,0	0/0:8,0:8:18.04:0,18,208	0/0:11,0:11:23.96:0,24,259	0/0:9,0:9:17.27:0,17,216	0/0:40,0:40:99:0,105,1223	0/0:25,0:25:66.13:0,66,725	0/0:18,0:18:48.13:0,48,549	0/0:26,0:26:72.20:0,72,829	0/0:16,0:16:48.14:0,48,558	0/0:25,0:25:72.20:0,72,828	0/0:25,0:25:60.15:0,60,688	0/0:12,0:12:30.08:0,30,348	0/0:19,0:19:54.16:0,54,629	0/0:19,0:19:54.14:0,54,618	0/0:17,0:17:45.08:0,45,500	0/0:15,0:15:39.11:0,39,455	0/0:12,0:12:33.10:0,33,382	0/0:11,0:10:24.07:0,24,280	0/0:22,0:22:66.16:0,66,744	0/0:29,0:29:87.24:0,87,1002	0/0:19,0:19:54.15:0,54,628	0/0:26,0:26:75.21:0,75,864	0/0:30,0:30:87.26:0,87,1013	0/0:11,0:11:27.07:0,27,315	0/0:17,0:17:39.07:0,39,433	0/0:23,0:23:63.18:0,63,734	0/0:36,0:36:99:0,102,1178	0/0:18,0:18:51.15:0,51,594
chr10	23676545	.	T	TTTG	200.42	PASS	AB=0.708;AC=1;AF=0.018;AN=56;BaseQRankSum=4.666;DP=635;FS=1.348;HRun=0;HaplotypeScore=98.4337;InbreedingCoeff=-0.0179;MQ=68.44;MQ0=2;MQRankSum=-4.278;QD=11.79;ReadPosRankSum=0.904;VQSLOD=3.4864;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:10,6:17:37.50:275,0,38	0/0:11,0:11:27.08:0,27,399	0/0:28,0:23:51.09:0,51,740	0/0:36,0:26:60.27:0,60,810	0/0:36,0:36:99:0,105,1671	0/0:18,0:18:51.17:0,51,816	0/0:19,0:19:54.16:0,54,793	0/0:24,0:24:66.18:0,66,938	0/0:18,0:18:54.18:0,54,857	0/0:31,0:31:87.29:0,87,1380	0/0:25,0:25:72.25:0,72,1175	0/0:15,0:15:39.13:0,39,634	0/0:29,0:29:87.29:0,87,1380	0/0:29,0:29:84.25:0,84,1236	0/0:20,0:20:57.17:0,57,873	0/0:23,0:23:69.22:0,69,1081	0/0:25,0:25:60.09:0,60,954	0/0:19,0:19:48.16:0,48,765	0/0:15,0:14:42.12:0,42,581	0/0:22,0:22:63.19:0,63,959	0/0:21,0:21:63.21:0,63,1007	0/0:24,0:24:69.14:0,69,1075	0/0:22,0:22:60.19:0,60,957	0/0:20,0:20:57.19:0,57,944	0/0:14,0:14:42.12:0,42,657	0/0:22,0:22:60.19:0,60,922	0/0:37,0:37:99:0,99,1559	0/0:15,0:15:42.11:0,42,645
chr10	23676858	.	ATAT	A	686.99	PASS	AC=2;AF=0.037;AN=54;BaseQRankSum=6.472;DP=374;FS=0.000;HRun=0;HaplotypeScore=55.0033;InbreedingCoeff=0.6906;MQ=70.10;MQ0=0;MQRankSum=-1.055;QD=40.41;ReadPosRankSum=1.997;VQSLOD=4.3393;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,17:17:42.14:781,42,0	0/0:7,0:7:21.07:0,21,517	0/0:6,0:6:6.35:0,6,285	0/0:7,0:6:3.50:0,4,95	0/0:27,0:27:81.26:0,81,1938	0/0:23,0:23:69.20:0,69,1573	0/0:9,0:9:27.03:0,27,468	0/0:36,0:36:99:0,105,2292	0/0:5,0:5:15.03:0,15,293	0/0:20,0:20:60.19:0,60,1340	0/0:26,0:26:78.27:0,78,1867	0/0:2,0:2:6.02:0,6,148	0/0:13,0:13:39.09:0,39,754	0/0:11,0:11:33.11:0,33,812	0/0:8,0:8:24.07:0,24,541	0/0:9,0:9:27.08:0,27,616	0/0:18,0:18:54.17:0,54,1242	0/0:9,0:9:27.09:0,27,648	0/0:22,0:22:66.21:0,66,1512	0/0:14,0:14:42.13:0,42,937	./.	0/0:5,0:5:15.02:0,15,271	0/0:5,0:5:15.04:0,15,320	0/0:7,0:7:21.05:0,21,465	0/0:6,0:6:18.06:0,18,420	0/0:22,0:22:66.21:0,66,1532	0/0:17,0:16:51.16:0,51,1173	0/0:23,0:23:66.23:0,66,1623
chr10	23677057	.	G	GT	1702.07	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-8.297;DP=474;FS=3.268;HRun=8;HaplotypeScore=51.1380;InbreedingCoeff=0.9518;MQ=76.94;MQ0=2;MQRankSum=-0.203;QD=27.45;ReadPosRankSum=2.090;VQSLOD=4.3418;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:22:51.01:0,51,462	0/0:6,0:6:17.96:0,18,157	0/0:17,0:17:10.60:0,11,200	0/0:19,0:19:7.21:0,7,175	0/0:22,0:22:57.03:0,57,522	0/0:25,0:25:63.03:0,63,576	0/0:11,0:11:33.01:0,33,297	0/0:19,0:19:34.77:0,35,301	0/0:22,0:22:54.02:0,54,494	0/0:17,0:17:51.02:0,51,463	0/0:25,0:25:66.03:0,66,604	0/0:9,0:9:27:0,27,242	0/0:11,0:11:33.02:0,33,302	0/0:15,0:15:42:0,42,378	0/0:18,0:18:51.03:0,51,466	0/0:18,0:18:48.02:0,48,439	0/0:17,0:17:42.01:0,42,384	0/0:17,0:17:36.47:0,36,330	0/0:14,0:14:32.76:0,33,287	0/0:18,0:18:51.03:0,51,466	0/0:15,0:15:45.01:0,45,406	0/0:7,0:7:21.01:0,21,192	0/0:11,0:11:33.02:0,33,302	0/0:17,0:17:48.03:0,48,439	0/0:18,0:18:45.01:0,45,412	1/1:3,20:23:38.71:688,39,0	1/1:2,22:23:60.18:692,60,0	1/1:0,14:15:41.96:465,42,0
chr10	23717512	.	C	CCA	281.42	PASS	AB=0.961;AC=27;AF=0.540;AN=50;BaseQRankSum=-0.617;DP=276;FS=0.000;HRun=0;HaplotypeScore=83.7850;InbreedingCoeff=0.1863;MQ=31.73;MQ0=18;MQRankSum=-0.842;QD=1.46;ReadPosRankSum=0.318;VQSLOD=1.5939;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:15,0:14:1.67:2,0,14	./.	./.	./.	0/0:11,0:11:0:0,0,0	1/1:14,0:13:2.94:19,3,0	0/1:8,5:13:11.84:20,0,12	0/0:13,0:10:0.46:0,0,1	0/0:14,0:13:2.84:0,3,24	1/1:9,0:8:8.09:42,8,0	0/1:14,0:13:0.01:0,0,0	1/1:8,1:9:5.87:59,6,0	0/1:17,1:16:19.27:94,0,19	0/0:10,4:13:2.86:0,3,24	1/1:5,0:6:0.47:1,0,0	1/1:4,4:9:3:44,3,0	0/1:3,0:7:0:0,0,0	0/0:2,0:4:2.68:0,3,11	0/0:10,0:10:1.64:0,2,6	0/0:9,0:8:5.36:0,5,22	0/1:6,0:8:0:0,0,0	1/1:9,0:8:0.79:6,1,0	0/1:9,0:8:0.01:0,0,0	0/1:16,0:15:15.46:37,0,15	1/1:9,2:11:3:44,3,0	1/1:10,0:8:0.89:2,1,0	1/1:10,0:9:3.44:22,3,0	0/1:3,0:3:0:0,0,0
chr10	23718655	.	AT	A	3056.17	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=11.463;DP=594;FS=1.975;HRun=2;HaplotypeScore=56.0302;InbreedingCoeff=0.9924;MQ=77.07;MQ0=0;MQRankSum=-0.644;QD=34.34;ReadPosRankSum=2.280;VQSLOD=3.9976;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,14:15:29.30:494,29,0	0/0:6,0:6:18.06:0,18,270	0/0:15,0:15:41.06:0,41,579	0/0:10,0:10:26.97:0,27,337	0/0:37,0:37:99:0,108,1617	0/0:22,0:22:66.21:0,66,967	0/0:14,0:14:39.11:0,39,563	0/0:46,0:46:99:0,138,2049	0/0:16,0:16:48.16:0,48,719	0/0:35,0:35:99:0,105,1573	0/0:24,0:24:72.22:0,72,1039	0/0:15,0:15:42.14:0,42,629	0/0:21,0:21:57.19:0,57,854	0/0:29,0:29:87.29:0,87,1302	0/0:23,0:23:63.20:0,63,926	0/0:15,0:15:45.15:0,45,674	0/0:18,0:18:51.16:0,51,745	0/0:10,0:10:30.07:0,30,425	0/0:15,0:15:42.13:0,42,611	0/0:43,0:43:99:0,129,1912	0/0:10,0:10:30.10:0,30,450	0/0:20,0:20:57.19:0,57,854	0/0:32,0:32:96.32:0,96,1421	0/0:6,0:6:15.05:0,15,225	0/0:23,0:23:69.23:0,69,1034	1/1:0,30:30:90.29:1167,90,0	1/1:0,32:32:90.29:1167,90,0	1/1:0,12:12:30.10:389,30,0
chr10	23719509	.	CAG	C	655.90	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.355;DP=695;FS=2.044;HRun=0;HaplotypeScore=78.9359;InbreedingCoeff=0.9247;MQ=89.08;MQ0=0;MQRankSum=-3.107;QD=32.80;ReadPosRankSum=1.295;VQSLOD=5.8808;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,20:20:51.17:751,51,0	0/0:7,0:7:21.07:0,21,386	0/0:38,0:38:99:0,108,1774	0/0:26,0:26:72.24:0,72,1279	0/0:27,0:27:75.26:0,75,1404	0/0:29,0:29:81.26:0,81,1468	0/0:18,0:18:54.19:0,54,1008	0/0:33,0:33:90.30:0,90,1640	0/0:20,0:20:60.21:0,60,1116	0/0:33,0:33:99:0,99,1826	0/0:23,0:23:69.24:0,69,1284	0/0:22,0:22:60.19:0,60,1091	0/0:33,0:33:96.33:0,96,1790	0/0:25,0:25:75.26:0,75,1390	0/0:31,0:31:90.29:0,90,1645	0/0:20,0:20:54.19:0,54,1011	0/0:20,0:20:60.20:0,60,1098	0/0:5,0:5:15.05:0,15,277	0/0:19,0:19:57.18:0,57,1000	0/0:32,0:32:93.28:0,93,1641	0/0:25,0:25:75.22:0,75,1352	0/0:36,0:36:99:0,108,2007	0/0:31,0:31:90.31:0,90,1677	0/0:27,0:27:81.23:0,81,1455	0/0:31,0:31:93.32:0,93,1735	0/0:27,0:27:78.26:0,78,1429	0/0:32,0:32:93.32:0,93,1741	0/0:4,0:4:8.74:0,9,168
chr10	23720329	.	GTATATA	G	1079.58	PASS	AC=20;AF=0.667;AN=30;BaseQRankSum=-0.445;DP=145;FS=1.938;HRun=0;HaplotypeScore=34.7270;InbreedingCoeff=0.4504;MQ=86.41;MQ0=1;MQRankSum=-2.504;QD=14.79;ReadPosRankSum=-1.503;VQSLOD=1.9823;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:10,0:10:3.01:0,3,36	0/0:12,0:8:0:0,0,0	1/1:3,1:4:2.97:20,3,0	1/1:2,4:6:6.02:119,6,0	./.	1/1:17,8:23:24.04:403,24,0	1/1:4,2:6:3.01:63,3,0	1/1:7,1:8:5.99:84,6,0	1/1:3,1:4:3.01:63,3,0	./.	1/1:4,1:5:3.01:63,3,0	1/1:3,2:5:5.98:83,6,0	./.	1/1:2,3:6:11.97:146,12,0	./.	./.	0/0:2,0:2:3.01:0,3,40	./.	./.	./.	./.	./.	1/1:0,4:4:8.99:145,9,0	./.	0/0:8,0:8:6:0,6,100	0/0:1,0:1:3:0,3,25
chr10	23720444	.	GTCTC	G	1984.36	PASS	AB=0.667;AC=21;AF=0.525;AN=40;BaseQRankSum=3.577;DP=303;FS=10.533;HRun=0;HaplotypeScore=104.7370;InbreedingCoeff=0.6981;MQ=43.67;MQ0=12;MQRankSum=-4.035;QD=13.69;ReadPosRankSum=-4.608;VQSLOD=1.1159;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:10:6.02:0,6,140	./.	./.	./.	0/1:0,18:18:0:0,0,0	./.	0/1:0,10:10:0:0,0,0	1/1:9,16:19:47.95:667,48,0	1/1:0,9:9:2.56:56,3,0	1/1:2,14:14:39.11:639,39,0	1/1:3,7:9:6.02:114,6,0	1/1:4,0:4:5.95:68,6,0	1/1:1,8:8:3.01:56,3,0	1/1:0,13:13:8.82:153,9,0	./.	1/1:1,11:11:14.69:231,15,0	0/0:9,0:9:11.16:0,11,260	0/0:6,0:5:7.62:0,8,317	0/0:9,0:7:20.61:0,21,397	0/0:15,0:13:27.52:0,28,606	0/0:18,0:17:45.14:0,45,1140	./.	1/1:3,7:10:9.03:150,9,0	./.	./.	0/1:9,0:9:0.90:1,0,608	0/0:10,0:9:30.10:0,30,694	0/0:6,0:6:18.06:0,18,485
chr10	23720478	.	CTG	C	286.68	PASS	AB=0.951;AC=21;AF=0.477;AN=44;BaseQRankSum=4.801;DP=237;FS=4.134;HRun=0;HaplotypeScore=84.3512;InbreedingCoeff=0.4874;MQ=33.55;MQ0=11;MQRankSum=-4.407;QD=2.41;ReadPosRankSum=0.849;VQSLOD=1.3956;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:12,0:10:8.98:72,9,0	./.	./.	0/0:4,0:2:6.01:0,6,80	./.	0/1:6,0:6:0:0,0,0	1/1:8,0:7:1.24:5,1,0	0/1:17,0:13:39.33:53,0,39	1/1:4,0:4:2.62:17,3,0	1/1:11,0:10:16.09:106,16,0	./.	0/0:1,1:2:0.89:0,1,2	1/1:5,0:4:2.94:18,3,0	0/1:11,1:12:0.10:0,0,0	0/1:4,1:5:0:0,0,0	1/1:7,3:9:14.49:126,14,0	0/1:9,0:9:4.32:4,0,81	0/0:5,0:4:10.99:0,11,94	0/0:6,0:5:11.90:0,12,102	0/0:11,0:9:17.95:0,18,165	0/0:10,1:10:6.91:0,7,125	./.	./.	1/1:5,1:6:0.47:1,0,0	1/1:14,0:14:2.97:20,3,0	0/0:9,0:8:16.30:0,16,261	0/0:11,0:9:27.07:0,27,437	0/0:4,0:4:12.02:0,12,192
chr10	23720498	.	CTG	C	978.62	PASS	AB=1.000;AC=37;AF=0.712;AN=52;BaseQRankSum=0.286;DP=234;FS=1.510;HRun=0;HaplotypeScore=53.8551;InbreedingCoeff=0.4704;MQ=37.37;MQ0=21;MQRankSum=1.803;QD=6.66;ReadPosRankSum=1.875;VQSLOD=2.9351;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:12,0:9:8.97:71,9,0	./.	0/0:12,0:3:5.92:0,6,39	0/0:30,0:11:4.33:0,4,101	./.	1/1:6,0:4:0.47:1,0,0	1/1:7,0:6:0.62:4,1,0	1/1:16,0:9:10.30:63,10,0	0/0:3,0:2:0:0,0,0	1/1:7,0:6:11.76:77,12,0	0/0:15,0:14:0.94:0,1,2	0/0:3,0:3:0.89:0,1,2	1/1:4,0:4:2.94:18,3,0	0/1:5,0:5:0.10:0,0,0	0/1:6,0:6:0.01:0,0,0	1/1:11,0:10:17.78:144,18,0	1/1:8,0:8:12.05:101,12,0	1/1:5,1:4:5.63:45,6,0	1/1:6,1:7:16.90:147,17,0	1/1:3,1:3:3:25,3,0	1/1:5,0:4:8.83:62,9,0	0/1:9,0:9:0.01:0,0,0	0/0:9,0:9:0.47:0,0,1	1/1:5,0:4:0.10:0,0,0	1/1:11,0:11:2.40:19,2,0	1/1:5,2:6:17.32:130,17,0	1/1:4,3:6:11.93:100,12,0	1/1:4,0:3:8.98:79,9,0
chr10	23720517	.	TCTC	T	218.29	PASS	AB=1.000;AC=15;AF=0.288;AN=52;BaseQRankSum=0.573;DP=231;FS=11.405;HRun=0;HaplotypeScore=51.5512;InbreedingCoeff=0.3811;MQ=58.10;MQ0=17;MQRankSum=0.920;QD=2.87;ReadPosRankSum=1.098;VQSLOD=0.2746;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:11:10.57:0,11,64	./.	0/1:22,0:10:14.74:15,0,188	0/0:39,0:18:1.57:0,2,356	./.	1/1:8,0:6:1.42:4,1,0	0/0:5,0:5:4.72:0,5,34	0/0:21,0:15:21.19:0,21,139	0/0:4,0:3:3.89:0,4,32	0/0:3,0:3:5.05:0,5,39	1/1:12,0:10:0.26:2,0,0	0/0:4,0:4:2.97:0,3,20	0/0:3,0:3:3.48:0,3,46	0/0:5,0:5:1.83:0,2,4	0/0:5,0:5:0:0,0,1	1/1:9,0:9:4.84:48,5,0	0/0:7,0:6:3.08:0,3,16	0/0:5,0:4:3.07:0,3,26	0/0:11,0:11:24.97:0,25,103	0/0:5,0:4:4.90:0,5,18	0/1:3,0:2:0:0,0,0	0/0:4,0:4:1.25:0,1,4	0/1:8,0:8:0.11:4,0,0	0/0:6,0:5:0.47:0,0,1	0/0:7,0:7:9.01:0,9,94	1/1:6,2:8:20.79:187,21,0	1/1:1,3:4:6.49:71,6,0	1/1:2,0:1:2.80:13,3,0
chr10	23720518	.	CT	C	514	PASS	AB=0.950;AC=37;AF=0.712;AN=52;BaseQRankSum=0.433;DP=229;FS=2.942;HRun=1;HaplotypeScore=47.3454;InbreedingCoeff=0.1734;MQ=58.87;MQ0=16;MQRankSum=1.299;QD=2.95;ReadPosRankSum=-0.087;VQSLOD=-0.4671;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:11:14.46:0,14,101	./.	0/1:23,0:11:8.74:9,0,133	0/1:39,0:18:7.56:8,0,236	./.	1/1:6,1:5:3.48:32,3,0	1/1:5,1:6:5.37:30,5,0	0/0:19,1:15:1.11:0,1,96	0/1:4,0:3:17.77:18,0,18	0/1:2,1:3:17.19:17,0,19	1/1:12,0:10:2.36:30,2,0	0/0:4,0:4:1.97:0,2,18	0/0:3,0:3:3.48:0,3,39	1/1:4,0:4:1.83:4,2,0	1/1:4,0:4:0.47:1,0,0	1/1:6,3:9:9.81:72,10,0	1/1:7,0:6:8.97:75,9,0	0/1:6,0:5:13.07:32,0,13	1/1:11,0:11:3.53:116,4,0	1/1:4,1:4:5.70:40,6,0	1/1:3,0:2:2.96:19,3,0	1/1:4,0:4:0.95:2,1,0	1/1:3,4:7:8.97:85,9,0	1/1:5,1:5:0.47:1,0,0	0/0:8,0:8:6.36:0,6,54	1/1:8,0:8:3.89:29,4,0	1/1:4,0:4:5.06:16,5,0	1/1:2,0:1:2.94:18,3,0
chr10	23720520	.	C	CTCT	311.40	PASS	AB=1.000;AC=19;AF=0.352;AN=54;BaseQRankSum=1.050;DP=213;FS=6.614;HRun=0;HaplotypeScore=54.0485;InbreedingCoeff=0.1722;MQ=63.49;MQ0=15;MQRankSum=-0.341;QD=2.81;ReadPosRankSum=2.158;VQSLOD=0.3162;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:10:4.78:0,5,18	./.	0/1:23,0:11:11.83:12,0,176	0/0:41,0:20:4.83:0,5,386	0/0:5,0:5:2.99:0,3,24	1/1:5,0:4:1.49:4,1,0	0/0:6,0:6:1.02:0,1,3	1/1:18,0:14:4.37:33,4,0	0/0:4,0:3:3.79:0,4,32	0/0:3,0:3:5.05:0,5,39	1/1:8,0:7:1.55:4,2,0	0/0:3,0:3:0:0,0,0	0/0:6,0:6:2.18:0,2,22	0/0:4,0:4:1.83:0,2,4	0/1:4,0:4:0.31:0,0,0	0/1:8,0:8:17.15:21,0,17	0/1:6,0:5:2.54:39,0,3	0/1:5,0:4:3.25:7,0,3	0/1:10,0:10:26.81:27,0,35	0/0:3,0:3:3.11:0,3,9	0/0:2,0:1:0.89:0,1,2	0/0:3,0:3:0.48:0,0,2	1/1:6,0:6:0.54:5,1,0	0/1:6,0:5:0.08:0,0,0	0/0:7,0:7:8.79:0,9,70	1/1:4,4:8:1.73:240,2,0	1/1:3,0:3:5.91:39,6,0	0/0:2,0:1:2.98:0,3,21
chr10	23720524	.	C	CA	653.10	PASS	AC=12;AF=0.231;AN=52;BaseQRankSum=-0.767;DP=221;FS=5.621;HRun=0;HaplotypeScore=43.7843;InbreedingCoeff=0.5389;MQ=71.93;MQ0=14;MQRankSum=2.235;QD=19.79;ReadPosRankSum=4.328;VQSLOD=5.6378;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:11:23.95:0,24,222	./.	0/0:26,0:14:19.49:0,19,337	0/0:42,0:21:28.60:0,29,380	0/0:4,0:4:3:0,3,26	0/0:7,0:5:3.65:0,4,42	0/0:8,0:8:6.55:0,7,29	0/0:20,0:17:22.42:0,22,168	0/0:6,0:5:10.25:0,10,96	0/0:4,0:4:8.03:0,8,70	0/0:7,0:6:4.51:0,5,52	0/0:3,0:3:2.51:0,3,7	0/0:7,0:7:7.55:0,8,69	0/0:3,0:3:8.76:0,9,51	0/0:5,0:5:3.47:0,3,28	0/0:6,0:6:0.54:0,1,35	1/1:1,6:6:11.97:141,12,0	1/1:1,4:4:6.02:82,6,0	1/1:0,11:11:33.10:444,33,0	1/1:1,1:2:6.02:83,6,0	1/1:1,3:3:3.01:41,3,0	0/0:3,0:3:2.92:0,3,17	1/1:4,0:4:0.40:4,0,0	0/0:6,0:5:2.96:0,3,25	0/0:6,0:6:15.40:0,15,154	0/0:7,0:7:18.22:0,18,125	0/0:3,0:3:5.87:0,6,36	./.
chr10	23723711	.	AT	A	921.21	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.878;DP=503;FS=17.941;HRun=1;HaplotypeScore=53.3911;InbreedingCoeff=0.9545;MQ=67.94;MQ0=0;MQRankSum=-2.842;QD=27.92;ReadPosRankSum=1.689;VQSLOD=2.1612;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,32:33:78.16:1016,78,0	0/0:7,0:7:21.07:0,21,307	0/0:4,0:4:11.86:0,12,115	0/0:7,0:7:18.04:0,18,243	0/0:28,0:28:84.26:0,84,1207	0/0:23,0:23:69.19:0,69,939	0/0:9,0:9:27.05:0,27,327	0/0:28,1:29:45.45:0,45,1069	0/0:14,0:14:42.10:0,42,557	0/0:16,0:16:48.10:0,48,614	0/0:21,0:21:63.17:0,63,881	0/0:11,0:11:33.11:0,33,482	0/0:14,0:14:42.12:0,42,579	0/0:18,0:18:54.16:0,54,734	0/0:25,0:25:75.23:0,75,1063	0/0:19,0:19:57.17:0,57,797	0/0:16,0:16:48.13:0,48,665	0/0:19,0:19:54.18:0,54,763	0/0:14,0:14:42.12:0,42,581	0/0:36,0:36:99:0,108,1501	0/0:15,0:15:45.12:0,45,593	0/0:10,0:10:27.08:0,27,376	0/0:18,0:18:54.14:0,54,732	0/0:9,0:9:27.08:0,27,365	0/0:24,0:24:72.22:0,72,1004	0/0:23,0:23:69.21:0,69,971	0/0:30,0:30:90.26:0,90,1257	0/0:11,0:11:33.08:0,33,447
chr10	23723725	.	AG	A	2182.76	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.759;DP=493;FS=5.816;HRun=1;HaplotypeScore=49.3931;InbreedingCoeff=0.9759;MQ=68.29;MQ0=0;MQRankSum=0.301;QD=37.00;ReadPosRankSum=0.557;VQSLOD=3.7214;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:78.02:0,78,1201	0/0:7,0:7:21.07:0,21,332	0/0:6,0:6:18.06:0,18,276	0/0:4,0:4:12.04:0,12,184	0/0:32,0:32:96.33:0,96,1528	0/0:20,0:20:60.20:0,60,956	0/0:10,0:10:30.10:0,30,477	0/0:27,0:27:81.26:0,81,1240	0/0:13,0:13:39.13:0,39,623	0/0:15,0:15:45.15:0,45,700	0/0:21,0:21:63.21:0,63,1007	0/0:12,0:12:36.11:0,36,552	0/0:14,0:14:42.14:0,42,671	0/0:16,0:16:48.16:0,48,763	0/0:27,0:27:81.28:0,81,1294	0/0:20,0:20:60.20:0,60,956	0/0:16,0:16:48.11:0,48,716	0/0:20,0:20:59.51:0,60,888	0/0:17,0:17:51.17:0,51,795	0/0:35,0:35:99:0,99,1555	0/0:12,0:12:15.44:0,15,507	0/0:11,0:11:33.11:0,33,527	0/0:15,0:15:45.14:0,45,696	0/0:11,0:11:33.11:0,33,527	0/0:26,0:26:78.25:0,78,1222	1/1:1,21:22:18.23:814,18,0	1/1:0,29:29:84.28:1174,84,0	1/1:0,8:8:24.08:336,24,0
chr10	23723793	.	C	CT	442.78	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.503;DP=501;FS=0.000;HRun=3;HaplotypeScore=52.6199;InbreedingCoeff=0.9653;MQ=83.74;MQ0=0;MQRankSum=-4.004;QD=24.60;ReadPosRankSum=0.509;VQSLOD=2.9132;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,14:18:41.99:538,42,0	0/0:8,0:8:18.05:0,18,216	0/0:14,0:14:39.02:0,39,432	0/0:17,0:17:29.39:0,29,277	0/0:31,0:31:75.16:0,75,851	0/0:21,0:21:60.17:0,60,708	0/0:8,0:8:24.06:0,24,277	0/0:25,0:25:72.19:0,72,837	0/0:12,0:12:36.11:0,36,432	0/0:21,0:21:63.19:0,63,747	0/0:20,0:20:57.14:0,57,652	0/0:15,0:15:45.14:0,45,540	0/0:8,0:8:21.06:0,21,252	0/0:13,0:13:39.10:0,39,447	0/0:18,0:18:51.13:0,51,590	0/0:28,0:28:78.21:0,78,912	0/0:12,0:12:36.06:0,36,403	0/0:25,0:25:72.04:0,72,796	0/0:18,0:18:48.11:0,48,538	0/0:31,0:31:90.23:0,90,1037	0/0:6,0:6:15.05:0,15,180	0/0:15,0:15:45.12:0,45,520	0/0:22,0:22:57.17:0,57,683	0/0:7,0:7:21.06:0,21,252	0/0:31,0:31:90.27:0,90,1070	0/0:18,0:18:45.13:0,45,531	0/0:28,0:28:69.17:0,69,801	0/0:11,0:11:27.08:0,27,323
chr10	23723815	.	C	CAA	662.86	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.819;DP=487;FS=8.377;HRun=8;HaplotypeScore=58.6257;InbreedingCoeff=0.8263;MQ=80.47;MQ0=0;MQRankSum=-3.179;QD=38.99;ReadPosRankSum=-1.754;VQSLOD=2.4936;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,15:17:48.16:758,48,0	0/0:8,0:8:21.06:0,21,234	0/0:9,0:10:17.78:0,18,178	0/0:19,0:19:3.67:0,4,276	0/0:28,0:28:63.14:0,63,702	0/0:19,0:19:57.15:0,57,635	0/0:10,0:10:27.07:0,27,301	0/0:23,0:23:69.18:0,69,760	0/0:14,0:14:39.08:0,39,426	0/0:23,0:23:66.16:0,66,721	0/0:25,0:25:75.20:0,75,835	0/0:17,0:17:51.14:0,51,568	0/0:9,0:9:21.02:0,21,223	0/0:11,0:11:33.09:0,33,368	0/0:15,0:15:39.09:0,39,426	0/0:23,0:23:63.17:0,63,702	0/0:16,0:16:42.10:0,42,468	0/0:20,0:20:51.13:0,51,566	0/0:17,0:17:39.06:0,39,422	0/0:27,0:27:69.14:0,69,760	0/0:4,0:4:12.03:0,12,134	0/0:16,0:16:42.11:0,42,468	0/0:22,0:22:66.16:0,66,726	0/0:10,0:10:24.05:0,24,267	0/0:29,0:29:81.22:0,81,902	0/0:15,0:15:36.08:0,36,401	0/0:25,0:25:66.16:0,66,736	0/0:15,0:15:42.11:0,42,468
chr10	23726468	.	GA	G	1279.18	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=6.625;DP=605;FS=14.872;HRun=10;HaplotypeScore=68.5911;InbreedingCoeff=0.9427;MQ=75.66;MQ0=0;MQRankSum=-0.585;QD=17.77;ReadPosRankSum=-0.612;VQSLOD=2.7582;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:55.30:0,55,657	0/0:8,0:8:24.06:0,24,265	0/0:15,0:15:27.04:0,27,272	0/0:14,0:14:17.37:0,17,151	0/0:36,0:36:93.24:0,93,1022	0/0:19,0:20:47.95:0,48,505	0/0:18,0:19:53.98:0,54,578	0/0:28,0:28:63.17:0,63,697	0/0:20,0:20:54.12:0,54,581	0/0:22,1:23:31.10:0,31,571	0/0:20,0:20:51.14:0,51,564	0/0:8,0:16:43.77:0,44,338	0/0:30,0:31:80.97:0,81,850	0/0:19,0:20:50.96:0,51,537	0/0:28,0:30:81.04:0,81,869	0/0:15,0:15:42.11:0,42,458	0/0:27,0:27:75.19:0,75,820	0/0:14,0:14:30.08:0,30,331	0/0:13,1:14:6.94:0,7,281	0/0:28,0:28:72.19:0,72,796	0/0:19,0:19:48.13:0,48,531	0/0:20,3:23:11.05:0,11,570	0/0:18,0:18:39.10:0,39,424	0/0:18,0:18:54.15:0,54,597	0/0:31,0:31:87.23:0,87,956	1/1:6,29:35:56.78:721,57,0	1/1:5,24:29:13.61:515,14,0	1/1:0,8:8:21:182,21,0
chr10	23727463	.	AAATAATAATAAT	A	527.65	PASS	AB=0.875;AC=13;AF=0.382;AN=34;BaseQRankSum=-0.053;DP=173;FS=3.345;HRun=0;HaplotypeScore=59.3155;InbreedingCoeff=0.4362;MQ=79.43;MQ0=2;MQRankSum=-2.525;QD=10.55;ReadPosRankSum=-1.854;VQSLOD=1.0287;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	1/1:2,0:3:2.99:24,3,0	./.	./.	./.	1/1:1,3:4:6.02:206,6,0	./.	1/1:16,0:15:3.01:41,3,0	1/1:4,1:5:3.01:103,3,0	0/0:3,0:3:3.01:0,3,53	0/1:6,0:7:17.74:18,0,47	1/1:6,0:6:3.01:85,3,0	./.	./.	0/0:7,0:8:3.01:0,3,36	./.	0/0:5,0:11:18.06:0,18,794	0/0:9,0:9:6.02:0,6,162	0/0:10,0:10:12.04:0,12,529	0/0:8,0:9:6.02:0,6,230	0/0:3,0:3:3.01:0,3,175	./.	./.	./.	1/1:5,4:9:9.03:174,9,0	0/0:7,0:9:6.02:0,6,73	0/0:4,0:6:6.02:0,6,73	0/0:6,0:13:12.04:0,12,388
chr10	23728114	.	CA	C	952.68	PASS	AB=0.833;AC=3;AF=0.054;AN=56;BaseQRankSum=8.813;DP=721;FS=6.214;HRun=8;HaplotypeScore=68.7840;InbreedingCoeff=0.6505;MQ=75.44;MQ0=0;MQRankSum=-0.614;QD=22.16;ReadPosRankSum=0.902;VQSLOD=4.2886;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,37:38:99:1043,108,0	0/0:13,0:13:30.09:0,30,361	0/0:19,0:19:44.63:0,45,456	0/0:9,0:9:17.22:0,17,226	0/0:44,0:44:99:0,108,1304	0/0:23,0:23:60.16:0,60,703	0/0:39,0:39:99:0,108,1293	0/0:19,0:19:51.13:0,51,587	0/0:23,0:23:63.18:0,63,749	0/0:41,0:41:99:0,108,1295	0/0:22,0:22:60.18:0,60,725	0/0:35,0:35:99:0,99,1184	0/0:29,0:29:84.24:0,84,996	0/0:27,0:27:75.17:0,75,873	0/0:38,0:38:99:0,108,1294	0/0:23,0:23:60.14:0,60,708	0/0:23,0:23:69.21:0,69,833	0/0:9,0:9:21.06:0,21,254	0/0:15,0:15:36.11:0,36,435	0/0:29,0:29:75.23:0,75,906	0/0:26,0:26:75.22:0,75,895	0/0:23,0:23:69.19:0,69,811	0/0:31,0:31:90.27:0,90,1077	0/0:25,0:25:75.21:0,75,883	0/0:26,0:26:69.21:0,69,834	0/0:25,0:25:54.17:0,54,652	0/0:42,0:42:99:0,120,1450	0/1:4,1:5:13.93:14,0,130
chr10	23731616	.	TG	T	711.35	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.169;DP=681;FS=3.806;HRun=6;HaplotypeScore=63.5475;InbreedingCoeff=0.8916;MQ=85.12;MQ0=0;MQRankSum=-4.797;QD=24.53;ReadPosRankSum=-0.945;VQSLOD=3.0499;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,28:29:75.19:806,75,0	0/0:10,0:10:30.10:0,30,393	0/0:17,0:17:42.13:0,42,544	0/0:27,0:27:75.21:0,75,943	0/0:37,0:37:99:0,105,1381	0/0:30,0:30:84.27:0,84,1105	0/0:17,0:17:48.16:0,48,630	0/0:45,0:45:99:0,111,1435	0/0:16,0:16:45.15:0,45,592	0/0:24,0:24:72.23:0,72,935	0/0:23,0:23:66.21:0,66,868	0/0:40,0:40:99:0,120,1562	0/0:35,0:35:99:0,105,1361	0/0:21,0:21:57.17:0,57,735	0/0:31,0:31:84.27:0,84,1102	0/0:25,0:25:75.24:0,75,985	0/0:35,0:35:99:0,99,1303	0/0:5,0:5:15.05:0,15,197	0/0:27,0:27:72.23:0,72,942	0/0:24,0:23:66.21:0,66,866	0/0:12,1:13:30.10:0,30,394	0/0:17,0:17:45.15:0,45,591	0/0:29,0:29:81.26:0,81,1064	0/0:27,0:27:75.24:0,75,987	0/0:27,0:27:81.25:0,81,1049	0/0:27,0:27:81.26:0,81,1065	0/0:21,0:20:60.18:0,60,775	0/0:2,0:2:6.02:0,6,79
chr10	23731818	.	CAT	C	10617.14	PASS	AB=0.643;AC=52;AF=0.929;AN=56;BaseQRankSum=-1.977;DP=491;FS=1.930;HRun=0;HaplotypeScore=76.4346;InbreedingCoeff=0.3140;MQ=74.31;MQ0=2;MQRankSum=0.032;QD=22.35;ReadPosRankSum=2.494;VQSLOD=5.3541;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:38:62.50:308,62,0	1/1:1,3:4:6.02:73,6,0	1/1:17,0:14:5.65:50,6,0	0/0:16,0:14:5.95:0,6,49	1/1:4,11:17:38.79:431,39,0	1/1:2,14:17:31.70:379,32,0	0/1:5,8:13:21.60:266,0,22	1/1:15,18:35:56.19:680,56,0	1/1:1,14:17:47.72:540,48,0	1/1:3,10:13:30.08:355,30,0	1/1:1,14:16:38.95:454,39,0	1/1:4,16:21:47.98:564,48,0	1/1:6,16:25:53.66:592,54,0	1/1:3,17:21:50.89:594,51,0	1/1:0,16:18:47.81:541,48,0	1/1:6,15:22:38.95:454,39,0	1/1:4,18:26:59.51:643,60,0	1/1:2,10:14:32.77:358,33,0	1/1:4,8:12:24.08:293,24,0	1/1:4,13:17:33.10:403,33,0	1/1:5,17:24:47.81:541,48,0	1/1:1,5:9:23.57:225,24,0	1/1:3,4:7:9.03:110,9,0	0/1:6,6:11:27.58:199,0,28	1/1:3,13:19:47.64:519,48,0	1/1:2,13:17:41.79:468,42,0	1/1:6,9:16:32.93:380,33,0	1/1:2,5:8:17.89:197,18,0
chr10	23732634	.	ACTGGAGATGGTCTCTACAGGGTCTAT	A	6197.11	PASS	AB=0.592;AC=3;AF=0.056;AN=54;BaseQRankSum=9.273;DP=698;FS=0.680;HRun=0;HaplotypeScore=448.1041;InbreedingCoeff=0.6468;MQ=58.92;MQ0=1;MQRankSum=-7.955;QD=129.11;ReadPosRankSum=3.957;VQSLOD=3.6164;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,123,13148	0/0:16,0:16:48.16:0,48,4962	0/0:24,0:23:69.24:0,69,4719	0/0:29,0:28:84.25:0,84,5582	0/0:24,0:24:69.24:0,69,7170	0/0:23,0:23:66.23:0,66,7236	0/0:20,0:20:54.17:0,54,5596	0/0:37,0:36:99:0,108,8662	0/0:17,0:17:51.16:0,51,5383	0/0:28,0:28:81.28:0,81,8802	0/0:21,0:21:60.21:0,60,6287	0/0:23,0:23:66.23:0,66,6442	0/0:29,0:29:87.30:0,87,9569	0/0:28,0:28:81.28:0,81,7952	0/0:28,0:28:78.27:0,78,8421	0/0:29,0:29:84.29:0,84,9787	0/0:41,0:41:99:0,120,12531	0/0:27,0:27:81.28:0,81,7950	0/0:19,0:19:51.18:0,51,5232	0/0:30,0:30:87.30:0,87,9734	0/0:20,0:20:60.21:0,60,6361	0/0:25,0:25:72.25:0,72,8384	0/0:23,0:23:69.22:0,69,7052	0/0:24,0:24:69.24:0,69,7787	0/0:18,0:18:54.19:0,54,5931	0/1:9,20:29:84.88:3867,0,85	1/1:7,12:19:33.11:2330,33,0	./.
chr10	23733836	.	G	GA	9330.09	PASS	AB=0.545;AC=33;AF=0.589;AN=56;BaseQRankSum=-13.728;DP=549;FS=5.003;HRun=9;HaplotypeScore=55.8048;InbreedingCoeff=0.8630;MQ=70.87;MQ0=0;MQRankSum=0.784;QD=25.28;ReadPosRankSum=-1.013;VQSLOD=5.2941;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:6:15:0,15,130	1/1:1,11:12:27.07:299,27,0	0/0:10,0:10:12.82:0,13,113	0/0:3,0:4:6:0,6,52	1/1:5,33:38:96.05:989,96,0	1/1:5,22:28:60:645,60,0	1/1:1,13:14:7.03:306,7,0	1/1:9,30:39:90.21:977,90,0	1/1:3,12:15:33.09:364,33,0	1/1:8,15:25:47.78:483,48,0	1/1:2,13:15:39.11:431,39,0	1/1:2,19:21:25.08:505,25,0	1/1:1,25:26:75.16:816,75,0	1/1:3,15:18:45.08:484,45,0	0/1:3,15:18:16.02:296,0,16	1/1:0,18:18:48.13:531,48,0	0/0:16,1:17:11.81:0,12,331	0/0:16,0:17:37.83:0,38,318	0/0:11,0:11:32.99:0,33,286	0/0:37,0:36:89.93:0,90,778	0/0:21,0:21:53.98:0,54,469	1/1:2,21:23:57.15:631,57,0	1/1:7,20:27:57.15:631,57,0	1/1:0,11:11:33.09:364,33,0	1/1:0,20:21:53.98:578,54,0	0/0:1,1:23:10.55:0,11,87	0/0:3,0:31:55:0,55,161	0/0:0,0:2:4.07:0,4,12
chr10	23735070	.	GA	G	762.14	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.693;DP=577;FS=0.819;HRun=2;HaplotypeScore=61.4310;InbreedingCoeff=0.9983;MQ=85.88;MQ0=0;MQRankSum=-2.829;QD=31.76;ReadPosRankSum=0.731;VQSLOD=3.2768;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,24:24:66.21:857,66,0	0/0:13,0:13:39.13:0,39,585	0/0:22,0:22:59.93:0,60,840	0/0:18,0:18:51.15:0,51,714	0/0:31,0:31:93.31:0,93,1389	0/0:15,0:15:45.15:0,45,674	0/0:12,0:12:33.11:0,33,495	0/0:27,0:27:78.25:0,78,1129	0/0:15,0:15:45.15:0,45,675	0/0:26,0:26:75.25:0,75,1103	0/0:26,0:26:78.26:0,78,1165	0/0:16,0:16:45.15:0,45,675	0/0:29,0:29:87.29:0,87,1302	0/0:24,0:24:72.24:0,72,1079	0/0:24,0:24:69.23:0,69,1034	0/0:11,0:11:30.10:0,30,449	0/0:20,0:20:60.20:0,60,894	0/0:12,0:12:36.12:0,36,539	0/0:21,0:21:63.21:0,63,944	0/0:20,0:20:60.19:0,60,879	0/0:13,0:13:39.13:0,39,583	0/0:22,0:22:66.19:0,66,947	0/0:27,0:27:78.26:0,78,1151	0/0:13,0:13:36.12:0,36,535	0/0:28,0:28:84.28:0,84,1241	0/0:25,0:25:75.25:0,75,1120	0/0:33,0:33:99:0,99,1463	0/0:10,0:10:30.10:0,30,450
chr10	23735573	.	AT	A	10502.53	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-5.715;DP=526;FS=2.021;HRun=10;HaplotypeScore=57.3706;InbreedingCoeff=0.9436;MQ=79.63;MQ0=1;MQRankSum=-5.621;QD=21.17;ReadPosRankSum=4.597;VQSLOD=5.6200;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,28:29:83.98:729,84,0	1/1:0,7:7:17.99:156,18,0	0/0:17,0:16:33.07:0,33,349	0/0:13,0:11:17.99:0,18,167	1/1:2,24:26:65.97:573,66,0	1/1:0,30:30:89.98:781,90,0	1/1:1,16:17:41.99:365,42,0	1/1:10,27:37:77.91:667,78,0	1/1:1,11:12:29.98:260,30,0	1/1:3,20:23:56.96:492,57,0	1/1:4,15:19:41.98:365,42,0	1/1:2,13:15:35.99:313,36,0	1/1:6,20:26:56.98:495,57,0	1/1:3,14:17:11.84:331,12,0	1/1:1,11:12:29.99:260,30,0	1/1:2,21:23:62.98:547,63,0	1/1:4,10:14:26.99:234,27,0	1/1:1,7:8:20.99:182,21,0	1/1:4,13:17:38.97:335,39,0	1/1:4,24:28:65.96:573,66,0	1/1:3,15:18:38.99:339,39,0	1/1:1,10:12:32.03:266,32,0	1/1:2,15:17:35.49:312,35,0	1/1:0,16:16:44.99:391,45,0	1/1:2,21:23:53.98:469,54,0	1/1:3,16:19:47.99:417,48,0	1/1:3,25:28:65.98:573,66,0	1/1:0,3:3:9:78,9,0
chr10	23735770	.	AG	A	567.06	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.823;DP=446;FS=0.937;HRun=2;HaplotypeScore=47.1175;InbreedingCoeff=0.9518;MQ=78.14;MQ0=0;MQRankSum=-3.235;QD=31.50;ReadPosRankSum=2.107;VQSLOD=3.2209;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,18:18:51.17:662,51,0	0/0:5,0:5:15.05:0,15,225	0/0:10,0:10:23.62:0,24,272	0/0:11,0:11:16.16:0,16,303	0/0:23,0:23:66.22:0,66,989	0/0:24,0:24:72.24:0,72,1079	0/0:9,0:9:27.09:0,27,405	0/0:38,0:38:99:0,108,1583	0/0:15,0:15:45.15:0,45,674	0/0:23,0:23:69.22:0,69,1001	0/0:11,0:11:33.10:0,33,477	0/0:10,0:10:30.10:0,30,449	0/0:12,0:12:36.12:0,36,540	0/0:15,0:15:45.15:0,45,674	0/0:11,0:11:33.11:0,33,493	0/0:17,0:17:48.14:0,48,679	0/0:19,0:19:51.17:0,51,760	0/0:11,0:11:27.05:0,27,360	0/0:17,0:17:51.17:0,51,763	0/0:18,0:18:54.17:0,54,789	0/0:7,0:7:21.07:0,21,315	0/0:9,0:9:27.09:0,27,404	0/0:21,0:21:57.08:0,57,765	0/0:7,0:7:21.06:0,21,296	0/0:23,0:23:66.22:0,66,984	0/0:32,0:32:96.32:0,96,1413	0/0:24,0:24:72.24:0,72,1079	0/0:6,0:6:18.06:0,18,267
chr10	23737323	.	C	CT	1237.66	PASS	AB=0.556;AC=5;AF=0.089;AN=56;BaseQRankSum=-5.896;DP=517;FS=4.375;HRun=11;HaplotypeScore=57.2222;InbreedingCoeff=0.8133;MQ=72.34;MQ0=0;MQRankSum=-1.677;QD=18.47;ReadPosRankSum=2.566;VQSLOD=4.8782;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:74.66:0,75,575	0/0:8,0:8:20.88:0,21,159	0/0:17,0:15:8.08:0,8,130	0/0:8,0:9:8.94:0,9,68	0/0:24,0:24:59.49:0,59,448	0/0:18,0:18:50.80:0,51,395	0/0:13,0:13:26.86:0,27,205	0/0:33,0:33:53.54:0,54,414	0/0:12,0:12:35.85:0,36,276	0/0:10,0:11:25.94:0,26,192	0/0:31,0:31:74.67:0,75,578	0/0:22,0:22:47.79:0,48,371	0/0:19,0:21:51.86:0,52,383	0/0:21,0:21:62.63:0,63,477	0/0:20,0:20:56.77:0,57,439	0/0:20,0:20:53.78:0,54,416	0/0:21,0:21:50.71:0,51,387	0/0:16,0:16:32.85:0,33,253	0/0:16,0:16:29.85:0,30,231	0/0:25,0:25:53.54:0,54,415	0/0:2,0:2:5.98:0,6,46	0/0:16,0:16:38.83:0,39,302	0/0:13,0:14:31.91:0,32,238	0/0:10,0:10:26.90:0,27,209	0/0:15,0:16:37.89:0,38,284	1/1:5,19:25:59.90:574,60,0	1/1:2,19:22:24.45:417,24,0	0/1:4,16:20:0.36:375,0,0
chr10	23737752	.	A	AT	7851.39	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-12.129;DP=425;FS=7.571;HRun=8;HaplotypeScore=36.9092;InbreedingCoeff=0.9578;MQ=64.58;MQ0=0;MQRankSum=-0.100;QD=27.65;ReadPosRankSum=0.555;VQSLOD=4.9426;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:39:0,39,350	1/1:1,6:7:18.05:208,18,0	1/1:3,0:3:2.74:12,3,0	0/0:5,0:4:11.91:0,12,92	1/1:1,20:21:60.18:692,60,0	1/1:5,15:20:39.12:450,39,0	1/1:0,7:7:21.06:242,21,0	1/1:6,20:28:44.15:645,44,0	1/1:1,12:13:24.07:273,24,0	1/1:1,15:16:45.13:519,45,0	1/1:1,17:18:48.14:554,48,0	1/1:0,14:14:36.11:416,36,0	1/1:0,18:18:48.14:554,48,0	1/1:3,11:14:30.09:347,30,0	0/0:0,0:22:30.56:0,31,90	0/0:11,0:11:33.02:0,33,302	0/0:19,0:19:41.98:0,42,379	0/0:18,0:18:48.02:0,48,439	0/0:17,0:17:45.02:0,45,412	0/0:28,0:28:84.05:0,84,769	0/0:6,0:6:15.01:0,15,137	1/1:1,7:8:21.06:242,21,0	1/1:2,15:17:42.12:485,42,0	1/1:1,5:6:12.04:138,12,0	1/1:1,11:12:33.10:381,33,0	1/1:3,18:21:57.16:651,57,0	1/1:4,26:30:60.18:689,60,0	1/1:1,10:11:32.31:353,32,0
chr10	23738565	.	A	AC	20138.80	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-3.801;DP=582;FS=5.251;HRun=1;HaplotypeScore=107.2869;InbreedingCoeff=0.9681;MQ=75.60;MQ0=1;MQRankSum=-6.439;QD=41.27;ReadPosRankSum=5.887;VQSLOD=4.2146;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,25:25:47.70:766,48,0	1/1:1,3:4:9.03:144,9,0	0/0:44,0:31:78.18:0,78,1041	0/0:49,1:39:63.20:0,63,1372	1/1:1,9:10:24.08:383,24,0	1/1:0,20:20:57.19:910,57,0	1/1:1,18:19:48.16:767,48,0	1/1:2,34:35:99:1591,102,0	1/1:1,18:19:51.17:815,51,0	1/1:1,8:9:27.09:431,27,0	1/1:1,9:11:27.08:408,27,0	1/1:0,17:18:48.16:767,48,0	1/1:3,23:26:66.23:1054,66,0	1/1:0,19:19:54.18:863,54,0	1/1:3,17:20:48.16:767,48,0	1/1:3,16:19:42.14:671,42,0	1/1:2,19:21:57.19:898,57,0	1/1:0,23:21:57.19:910,57,0	1/1:2,10:12:33.11:518,33,0	1/1:2,21:22:54.18:863,54,0	1/1:0,40:40:99:1774,111,0	1/1:0,16:16:42.14:660,42,0	1/1:1,20:22:54.18:862,54,0	1/1:0,20:20:51.17:815,51,0	1/1:3,12:15:38.80:586,39,0	1/1:0,12:12:36.12:576,36,0	1/1:1,18:19:57.19:911,57,0	1/1:1,9:10:27.09:431,27,0
chr10	23738575	.	A	AAC	74.35	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=1.393;DP=596;FS=3.339;HRun=0;HaplotypeScore=205.7006;InbreedingCoeff=0.9167;MQ=63.28;MQ0=5;MQRankSum=-0.079;QD=3.23;ReadPosRankSum=-3.017;VQSLOD=2.4988;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:11,12:23:12.01:160,12,0	0/0:4,0:4:11.99:0,12,134	0/0:48,0:28:40.33:0,40,519	0/0:54,0:36:56.79:0,57,770	0/0:11,0:11:20.58:0,21,182	0/0:23,0:23:51.03:0,51,585	0/0:18,0:18:30.08:0,30,386	0/0:33,0:32:65.90:0,66,834	0/0:21,0:21:51.09:0,51,614	0/0:12,0:12:30.15:0,30,355	0/0:13,0:13:30.91:0,31,336	0/0:17,0:17:36.12:0,36,463	0/0:25,0:25:60.04:0,60,699	0/0:17,0:17:39.08:0,39,474	0/0:20,0:20:53.76:0,54,588	0/0:17,0:17:39.08:0,39,470	0/0:21,0:21:57.14:0,57,690	0/0:23,0:21:48.10:0,48,611	0/0:14,0:14:32.46:0,32,377	0/0:27,1:27:57.89:0,58,615	0/0:37,0:37:63.14:0,63,809	0/0:17,0:17:29.53:0,30,328	0/0:23,0:23:41.94:0,42,582	0/0:16,0:16:33.52:0,34,392	0/0:16,0:16:35.99:0,36,407	0/0:13,0:13:15.10:0,15,351	0/0:22,0:22:48.04:0,48,575	0/0:10,0:10:30.06:0,30,368
chr10	23738607	.	CAGAGAGAGAGAGAGAG	C	7967.38	PASS	AB=0.850;AC=33;AF=0.635;AN=52;BaseQRankSum=0.461;DP=440;FS=0.000;HRun=0;HaplotypeScore=230.9132;InbreedingCoeff=0.7687;MQ=47.59;MQ0=16;MQRankSum=-5.923;QD=32.39;ReadPosRankSum=1.838;VQSLOD=3.8390;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:10,0:11:0.02:0,0,0	1/1:4,2:6:18.03:407,18,0	./.	./.	1/1:4,4:10:18.02:455,18,0	1/1:9,9:18:32.21:830,32,0	1/1:10,2:12:6.02:107,6,0	1/1:20,0:18:15.01:176,15,0	1/1:9,4:13:21.07:649,21,0	1/1:8,6:15:36.11:1083,36,0	1/1:5,6:10:21.04:625,21,0	1/1:6,5:11:15.05:489,15,0	1/1:19,2:20:27.02:594,27,0	1/1:6,3:10:15.05:455,15,0	0/0:18,0:26:44.60:0,45,674	0/1:8,0:15:1.38:1,0,457	0/0:14,0:17:24.67:0,25,387	0/0:18,0:21:27.06:0,27,425	0/0:8,0:11:24.08:0,24,392	0/0:14,0:23:8.85:0,9,553	0/0:15,0:16:8.54:0,9,127	1/1:10,3:13:19.85:486,20,0	1/1:10,6:15:38.78:942,39,0	1/1:9,0:8:3.48:53,3,0	1/1:9,3:13:21.07:536,21,0	0/1:19,1:20:78.03:78,0,3151	0/0:16,0:17:42.11:0,42,2796	0/0:13,0:13:22.30:0,22,448
chr10	23738674	.	A	AAT	82.71	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.859;DP=312;FS=3.412;HRun=0;HaplotypeScore=100.3220;InbreedingCoeff=0.6023;MQ=60.03;MQ0=1;MQRankSum=-1.699;QD=8.27;ReadPosRankSum=0.231;VQSLOD=3.0011;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,7:10:17.49:173,17,0	0/0:4,0:4:9.02:0,9,115	0/0:9,0:7:21.02:0,21,251	0/0:15,0:9:3.62:0,4,132	0/0:17,0:17:36.12:0,36,550	0/0:15,0:15:45.14:0,45,665	0/0:6,0:6:15.04:0,15,198	0/0:42,0:42:99:0,120,1750	0/0:6,0:6:15.05:0,15,229	0/0:18,0:18:54.18:0,54,825	0/0:15,0:15:39.12:0,39,574	0/0:4,0:4:12.04:0,12,177	0/0:12,0:12:33.06:0,33,459	0/0:8,0:8:21.07:0,21,312	0/0:15,0:15:42.14:0,42,640	0/0:5,0:5:15.05:0,15,229	0/0:14,0:14:39.09:0,39,561	0/0:7,0:7:15.05:0,15,229	0/0:23,0:22:60.16:0,60,867	0/0:12,0:12:27.05:0,27,387	0/0:2,0:2:6.02:0,6,91	0/0:4,0:4:12.03:0,12,164	0/0:8,0:8:18.05:0,18,230	0/0:6,0:6:12.01:0,12,183	0/0:11,0:11:33.07:0,33,472	0/0:13,0:13:39.05:0,39,545	0/0:8,0:8:18.06:0,18,269	0/0:2,0:2:6.01:0,6,71
chr10	23738705	.	AG	A	10635.54	PASS	AB=0.713;AC=54;AF=0.964;AN=56;BaseQRankSum=-2.983;DP=330;FS=0.000;HRun=4;HaplotypeScore=42.4009;InbreedingCoeff=-0.0303;MQ=64.68;MQ0=0;MQRankSum=-2.983;QD=32.23;ReadPosRankSum=0.963;VQSLOD=4.8791;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,11:11:27.08:324,27,0	1/1:0,3:3:9.03:108,9,0	0/1:2,3:5:11.49:111,0,11	0/1:6,1:7:18.63:19,0,45	1/1:0,17:17:48.15:574,48,0	1/1:1,13:14:39.12:468,39,0	1/1:0,7:7:18.06:216,18,0	1/1:0,32:32:96.25:1106,96,0	1/1:0,10:10:30.09:356,30,0	1/1:1,13:14:42.13:503,42,0	1/1:2,14:16:39.12:468,39,0	1/1:0,10:10:30.09:360,30,0	1/1:1,11:12:36.11:429,36,0	1/1:1,12:13:39.12:467,39,0	1/1:2,9:11:30.09:360,30,0	1/1:0,7:7:18.06:216,18,0	1/1:1,16:17:51.16:608,51,0	1/1:3,4:6:12.04:144,12,0	1/1:0,22:22:60.17:710,60,0	1/1:1,11:12:36.11:432,36,0	1/1:0,6:6:12.04:144,12,0	1/1:0,6:6:15.05:180,15,0	1/1:1,12:13:39.12:465,39,0	1/1:1,5:6:15.05:180,15,0	1/1:0,15:15:42.13:504,42,0	1/1:0,14:14:42.13:504,42,0	1/1:0,16:16:39.12:466,39,0	1/1:0,6:6:18.06:216,18,0
chr10	23738918	.	TTC	T	1644.06	PASS	AB=0.781;AC=42;AF=0.778;AN=54;BaseQRankSum=6.276;DP=498;FS=8.649;HRun=0;HaplotypeScore=132.2903;InbreedingCoeff=0.5740;MQ=71.55;MQ0=10;MQRankSum=-1.508;QD=4.49;ReadPosRankSum=4.610;VQSLOD=2.2570;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:20:3:0,3,25	1/1:4,0:4:5.68:28,6,0	1/1:27,2:21:6.01:59,6,0	0/0:43,0:25:2.38:0,2,43	1/1:17,0:17:5.68:28,6,0	1/1:14,0:14:17.04:83,17,0	1/1:18,0:18:8.19:41,8,0	1/1:35,0:35:11.36:56,11,0	1/1:19,0:19:19.89:98,20,0	1/1:13,0:12:17.04:84,17,0	1/1:8,0:8:8.52:42,9,0	1/1:24,0:23:20.36:99,20,0	1/1:21,0:21:17.04:84,17,0	1/1:25,0:25:26.04:127,26,0	0/1:4,12:18:8.31:293,0,8	1/1:2,15:18:35.93:383,36,0	1/1:13,0:13:0.47:1,0,0	1/1:7,0:7:2.42:14,2,0	1/1:13,0:12:5.68:28,6,0	1/1:16,0:16:19.89:98,20,0	0/1:23,0:21:0:0,0,1	1/1:6,0:6:5.68:28,6,0	1/1:11,0:11:11.36:56,11,0	./.	1/1:14,0:14:14.20:70,14,0	0/0:16,0:21:18.98:0,19,330	0/0:30,0:30:37.35:0,37,455	0/0:6,0:5:6.02:0,6,70
chr10	23738925	.	TC	T	1073.70	PASS	AB=0.717;AC=24;AF=0.429;AN=56;BaseQRankSum=10.973;DP=494;FS=10.876;HRun=1;HaplotypeScore=129.0813;InbreedingCoeff=-0.0977;MQ=65.86;MQ0=11;MQRankSum=-9.997;QD=3.77;ReadPosRankSum=4.411;VQSLOD=-0.4749;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:36.09:0,36,430	0/1:0,3:3:9.68:18,0,10	0/0:30,0:20:55.81:0,56,645	0/0:44,0:22:32.11:0,32,526	0/1:7,9:16:35.81:40,0,36	0/1:6,9:15:23.65:87,0,24	0/1:7,8:15:14.51:56,0,15	0/1:25,4:29:73.11:73,0,159	1/1:4,12:16:6.30:104,6,0	0/1:6,7:12:44.66:45,0,68	1/1:0,8:8:11.36:58,11,0	0/1:15,9:23:80.79:87,0,81	0/1:14,9:23:41.27:149,0,41	1/1:11,16:27:0.65:216,1,0	0/0:20,0:20:33.39:0,33,255	0/0:20,0:19:32.82:0,33,193	0/0:10,1:11:25.14:0,25,146	0/1:7,1:8:24.98:25,0,55	0/1:10,2:11:22.11:22,0,69	0/1:3,13:16:11.17:77,0,11	0/1:18,3:19:39.35:39,0,49	0/1:1,4:5:3.99:17,0,4	1/1:2,7:9:1.70:40,2,0	0/1:11,1:12:39.36:39,0,42	1/1:2,11:13:4.40:52,4,0	0/0:21,1:22:53.23:0,53,810	0/0:30,0:30:56.98:0,57,840	0/0:8,0:7:15.99:0,16,198
chr10	23738927	.	TCTCTCTC	T	4170.32	PASS	AB=0.695;AC=19;AF=0.339;AN=56;BaseQRankSum=11.042;DP=522;FS=6.101;HRun=0;HaplotypeScore=168.6164;InbreedingCoeff=-0.5067;MQ=62.45;MQ0=11;MQRankSum=-8.220;QD=13.81;ReadPosRankSum=9.106;VQSLOD=1.1410;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:33.11:0,33,535	0/1:0,3:3:11.89:101,0,12	0/0:29,0:18:51.15:0,51,680	0/0:44,0:22:52.96:0,53,703	0/1:10,9:19:57.96:202,0,58	0/1:12,8:20:83.85:366,0,84	0/1:11,8:19:94.99:130,0,95	0/1:29,3:33:99:141,0,358	0/1:6,12:18:81.80:338,0,82	0/1:6,7:12:54.36:343,0,54	0/1:0,8:8:26.23:147,0,26	0/1:16,9:24:99:375,0,124	0/1:15,9:24:91.75:356,0,92	0/1:13,14:28:17.35:621,0,17	0/0:21,0:21:48.14:0,48,1062	0/0:20,0:19:44.97:0,45,938	0/1:13,1:14:23.61:24,0,127	0/1:8,1:9:45.21:45,0,176	0/1:10,2:11:78.24:78,0,123	0/1:4,13:17:99:331,0,107	0/0:19,3:20:14.55:0,15,94	0/1:1,4:5:39.28:94,0,39	0/1:2,7:9:18.67:207,0,19	0/1:11,1:12:37.65:38,0,128	0/1:3,11:14:96.67:236,0,97	0/0:21,1:22:11.95:0,12,1739	0/0:30,0:30:56.93:0,57,1980	0/0:8,0:7:18.11:0,18,418
chr10	23739008	.	CTCATTA	C	30.36	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=1.514;DP=477;FS=0.000;HRun=0;HaplotypeScore=107.6422;InbreedingCoeff=0.8621;MQ=90.25;MQ0=0;MQRankSum=-2.333;QD=6.07;ReadPosRankSum=-0.605;VQSLOD=1.9036;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:1,4:5:6.02:111,6,0	0/0:5,0:5:15.05:0,15,550	0/0:25,0:25:69.23:0,69,2240	0/0:15,0:15:38.94:0,39,1268	0/0:19,0:19:54.19:0,54,1908	0/0:20,0:20:60.21:0,60,2048	0/0:15,0:15:45.15:0,45,1540	0/0:38,0:38:99:0,114,3780	0/0:9,0:9:24.08:0,24,836	0/0:23,0:23:69.24:0,69,2525	0/0:18,0:18:54.17:0,54,1849	0/0:23,0:23:69.24:0,69,2409	0/0:21,0:21:63.22:0,63,2254	0/0:24,0:24:72.25:0,72,2497	0/0:19,0:19:57.18:0,57,2002	0/0:9,0:9:27.09:0,27,946	0/0:18,0:18:54.19:0,54,1912	0/0:21,0:21:63.22:0,63,2249	0/0:20,0:20:57.15:0,57,1852	0/0:16,0:16:45.15:0,45,1647	0/0:11,0:11:30.10:0,30,1017	0/0:21,0:21:63.22:0,63,2309	0/0:10,0:10:30.10:0,30,1016	0/0:8,0:8:24.08:0,24,879	0/0:17,0:17:51.18:0,51,1787	0/0:18,0:18:54.19:0,54,1813	0/0:21,0:21:60.21:0,60,2062	0/0:8,0:8:24.08:0,24,879
chr10	23740208	.	TGTCC	T	733.42	PASS	AB=0.988;AC=20;AF=0.385;AN=52;BaseQRankSum=1.219;DP=377;FS=2.918;HRun=0;HaplotypeScore=76.3405;InbreedingCoeff=-0.3051;MQ=41.56;MQ0=37;MQRankSum=-0.223;QD=2.73;ReadPosRankSum=-1.304;VQSLOD=1.5651;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:53,0:2:1.36:0,1,36	0/1:60,0:5:2.37:2,0,19	0/0:11,0:10:3.79:0,4,50	0/1:25,0:25:14.53:15,0,176	0/1:13,0:13:53.28:53,0,93	0/1:36,0:34:99:213,0,1133	0/1:11,0:10:9.87:10,0,196	0/1:12,4:15:2.35:2,0,650	0/1:6,0:5:0:0,0,0	0/0:8,0:6:0.76:0,1,2	0/1:14,0:13:14.14:31,0,14	0/1:7,0:7:16.06:16,0,62	1/1:10,2:12:8.38:88,8,0	1/1:7,2:9:12.10:157,12,0	0/1:15,0:15:85.04:85,0,102	0/1:6,0:6:42.17:42,0,63	0/1:15,0:13:13.38:13,0,343	0/0:7,0:7:5.84:0,6,85	0/1:3,0:3:3.94:45,0,4	0/0:7,0:6:1.72:0,2,9	0/0:5,0:5:2.50:0,2,9	0/1:6,0:4:18.74:19,0,44	0/0:9,0:9:8.98:0,9,138	0/1:9,0:8:49.94:50,0,233	0/1:6,0:4:28.72:29,0,30	0/0:5,0:3:2.85:0,3,38
chr10	23740217	.	TTC	T	257.58	PASS	AB=0.722;AC=11;AF=0.220;AN=50;BaseQRankSum=0.183;DP=377;FS=2.256;HRun=0;HaplotypeScore=70.7327;InbreedingCoeff=0.4039;MQ=43.59;MQ0=35;MQRankSum=0.644;QD=4.68;ReadPosRankSum=0.382;VQSLOD=2.5583;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:55,0:3:0:0,0,0	0/0:60,0:5:3.48:0,3,24	0/0:12,0:11:8.80:0,9,94	0/0:25,0:25:14.41:0,14,166	0/0:10,0:10:5.98:0,6,71	0/0:44,0:42:33.51:0,34,501	0/0:10,0:9:7.84:0,8,100	0/0:15,0:14:29.91:0,30,340	./.	0/0:8,0:6:0.47:0,0,1	0/0:11,0:10:0.94:0,1,3	0/0:6,0:6:3.01:0,3,48	0/0:11,0:11:0:0,0,0	0/0:8,0:8:5.95:0,6,29	1/1:7,10:17:20.12:207,20,0	1/1:7,0:7:7.19:25,7,0	0/1:8,5:12:26.70:131,0,27	1/1:6,0:6:0.47:1,0,0	1/1:4,0:4:0.43:1,0,0	1/1:8,0:7:0.88:2,1,0	0/0:5,0:5:0:0,0,0	0/0:4,0:3:2.88:0,3,47	0/0:9,0:9:6.02:0,6,95	0/0:9,0:8:8.87:0,9,57	0/0:6,0:4:0:0,0,0	0/0:4,0:2:2.88:0,3,15
chr10	23740271	.	ATG	A	54.12	PASS	AB=1.000;AC=5;AF=0.093;AN=54;BaseQRankSum=2.394;DP=217;FS=4.961;HRun=0;HaplotypeScore=34.5766;InbreedingCoeff=0.5654;MQ=55.59;MQ0=6;MQRankSum=-0.824;QD=2.85;ReadPosRankSum=1.564;VQSLOD=0.9425;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:33.04:0,33,417	0/0:4,0:4:12.04:0,12,200	0/0:13,0:2:0.89:0,1,2	0/1:6,0:1:0:0,0,0	0/0:13,0:13:39.08:0,39,560	0/0:9,0:9:13.60:0,14,205	0/0:3,0:3:9.03:0,9,150	0/0:28,0:27:54.14:0,54,796	0/0:4,0:4:12.04:0,12,194	0/0:8,0:8:21.07:0,21,326	0/0:6,0:6:18.05:0,18,275	0/0:5,0:5:15.01:0,15,175	0/0:6,0:6:15.04:0,15,225	0/0:11,0:11:29.99:0,30,356	1/1:1,5:6:2.99:38,3,0	1/1:1,6:7:9.02:114,9,0	0/0:24,0:24:54.09:0,54,792	0/0:11,0:11:22.52:0,23,269	0/0:10,0:10:26.28:0,26,338	0/0:5,0:5:12.04:0,12,200	0/0:1,0:1:3.01:0,3,50	./.	0/0:2,0:2:5.99:0,6,48	0/0:3,0:3:9.03:0,9,143	0/0:4,0:4:9.03:0,9,148	0/0:3,0:3:9.01:0,9,103	0/0:9,0:9:21.04:0,21,298	0/0:4,0:2:6.02:0,6,100
chr10	23742193	.	G	GA	22030.72	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-7.006;DP=721;FS=0.531;HRun=5;HaplotypeScore=73.2231;InbreedingCoeff=0.9952;MQ=75.69;MQ0=0;MQRankSum=-6.314;QD=33.53;ReadPosRankSum=3.085;VQSLOD=5.2726;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:69.17:0,69,742	1/1:2,18:20:54.18:710,54,0	0/0:25,0:25:66.15:0,66,697	0/0:11,0:11:20.40:0,20,194	1/1:2,16:18:45.15:592,45,0	1/1:3,20:23:54.18:711,54,0	1/1:3,15:18:42.14:552,42,0	1/1:5,37:42:99:1414,111,0	1/1:0,23:23:60.20:790,60,0	1/1:2,34:36:99:1278,99,0	1/1:1,19:20:51.17:671,51,0	1/1:0,21:21:54.18:711,54,0	1/1:5,20:25:57.19:748,57,0	1/1:3,27:30:84.27:1095,84,0	1/1:2,26:28:69.22:908,69,0	1/1:0,22:22:66.21:869,66,0	1/1:0,28:28:72.23:947,72,0	1/1:1,9:10:18.06:237,18,0	1/1:5,26:31:81.24:1047,81,0	1/1:2,41:43:99:1559,120,0	1/1:2,22:24:56.40:717,56,0	1/1:4,31:35:87.28:1145,87,0	1/1:3,29:32:75.20:967,75,0	1/1:2,19:21:47.71:631,48,0	1/1:2,37:39:99:1421,108,0	1/1:3,25:28:75.23:972,75,0	1/1:3,27:30:72.23:946,72,0	1/1:0,10:10:30.10:395,30,0
chr10	23742478	.	AAAATAG	A	19943.19	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=4.023;DP=601;FS=0.690;HRun=0;HaplotypeScore=181.8274;InbreedingCoeff=0.9749;MQ=68.74;MQ0=0;MQRankSum=-16.826;QD=50.75;ReadPosRankSum=0.870;VQSLOD=4.9353;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:84.29:0,84,2868	1/1:0,11:11:30.10:686,30,0	0/0:29,0:29:81.25:0,81,2421	0/0:13,0:13:29.02:0,29,795	1/1:0,22:22:45.15:1081,45,0	1/1:1,24:25:63.21:1442,63,0	1/1:6,15:21:42.14:874,42,0	1/1:9,20:29:60.19:1391,60,0	1/1:1,16:17:45.15:977,45,0	1/1:2,30:32:90.29:2110,90,0	1/1:0,16:16:48.12:1028,48,0	1/1:1,24:25:63.21:1407,63,0	1/1:4,29:33:78.26:1596,78,0	1/1:1,25:26:60.20:1370,60,0	0/0:38,0:38:99:0,111,2998	0/0:28,0:28:81.25:0,81,2085	1/1:3,6:9:9.03:216,9,0	1/1:0,5:5:12.04:288,12,0	1/1:4,18:22:50.32:1057,50,0	1/1:3,18:20:45.06:909,45,0	1/1:2,9:11:12.04:183,12,0	1/1:0,17:17:45.11:854,45,0	1/1:0,21:21:48.12:959,48,0	1/1:3,9:12:12.04:288,12,0	1/1:0,18:18:54.18:1227,54,0	0/0:34,0:34:99:0,99,3370	0/0:25,0:25:72.25:0,72,2316	0/0:12,0:12:36.12:0,36,1297
chr10	23743854	.	T	TC	2264.88	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.454;DP=686;FS=1.099;HRun=0;HaplotypeScore=119.1292;InbreedingCoeff=0.9833;MQ=72.33;MQ0=1;MQRankSum=-9.844;QD=41.18;ReadPosRankSum=2.599;VQSLOD=3.3265;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:66.16:0,66,882	0/0:4,0:4:12.04:0,12,168	0/0:28,0:27:67.97:0,68,858	0/0:22,0:19:45.07:0,45,541	0/0:27,0:27:81.25:0,81,1102	0/0:27,0:27:81.23:0,81,1110	0/0:23,0:23:66.21:0,66,906	0/0:31,0:31:93.29:0,93,1259	0/0:22,0:22:63.19:0,63,862	0/0:22,0:22:66.19:0,66,874	0/0:27,0:27:81.25:0,81,1102	0/0:29,0:29:84.26:0,84,1128	0/0:43,0:43:99:0,117,1532	0/0:20,0:20:54.18:0,54,755	1/1:2,32:34:99:1449,99,0	1/1:1,20:21:63.20:938,63,0	0/0:27,0:27:81.25:0,81,1112	0/0:10,0:9:24.08:0,24,335	0/0:24,0:24:69.20:0,69,927	0/0:30,0:30:90.26:0,90,1194	0/0:19,0:19:51.17:0,51,713	0/0:15,0:15:45.14:0,45,614	0/0:18,0:18:51.15:0,51,682	0/0:24,0:24:66.19:0,66,888	0/0:29,0:29:87.26:0,87,1170	0/0:32,0:32:93.30:0,93,1284	0/0:36,0:36:96.26:0,96,1275	0/0:17,0:17:45.15:0,45,629
chr10	23743872	.	C	CTCCTTTTCCTCCTCT	9658.35	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.698;DP=705;FS=4.967;HRun=0;HaplotypeScore=314.8334;InbreedingCoeff=0.9886;MQ=66.22;MQ0=1;MQRankSum=-10.847;QD=142.03;ReadPosRankSum=0.648;VQSLOD=4.0108;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:34.57:0,35,2415	0/0:6,0:6:18.04:0,18,583	0/0:33,0:27:66.78:0,67,1499	0/0:30,0:25:15.77:0,16,653	0/0:27,0:27:78.23:0,78,2810	0/0:29,0:29:84.25:0,84,3162	0/0:21,0:21:60.16:0,60,2181	0/0:30,0:30:50.32:0,50,1310	0/0:20,0:20:54.16:0,54,1906	0/0:26,0:26:72.18:0,72,2143	0/0:26,0:26:75.23:0,75,2588	0/0:29,0:29:81.23:0,81,2708	0/0:41,0:41:99:0,99,3653	0/0:23,0:23:66.19:0,66,2238	1/1:31,12:43:99:6130,129,0	1/1:18,7:25:69.23:3528,69,0	0/0:27,0:27:81.20:0,81,2943	0/0:12,0:11:30.07:0,30,1109	0/0:22,0:22:51.12:0,51,1422	0/0:21,0:21:60.19:0,60,2201	0/0:19,0:19:48.15:0,48,1796	0/0:19,0:19:54.10:0,54,1535	0/0:21,0:21:60.17:0,60,2137	0/0:22,0:22:60.11:0,60,1580	0/0:26,0:26:75.21:0,75,2852	0/0:34,0:34:96.29:0,96,3461	0/0:30,0:30:71.85:0,72,2947	0/0:15,0:15:39.08:0,39,1486
chr10	23743914	.	TC	T	13894.91	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=3.527;DP=638;FS=5.227;HRun=8;HaplotypeScore=77.7026;InbreedingCoeff=0.9759;MQ=78.81;MQ0=1;MQRankSum=-4.087;QD=24.72;ReadPosRankSum=3.289;VQSLOD=5.7429;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:84.25:0,84,1003	1/1:1,6:7:18.03:174,18,0	0/0:22,0:19:29.74:0,30,307	0/0:21,1:22:9.49:0,9,361	1/1:3,24:27:78.12:753,78,0	1/1:2,23:25:72.11:691,72,0	1/1:9,11:20:27.03:261,27,0	1/1:2,22:24:66.03:613,66,0	1/1:1,20:21:57.09:550,57,0	1/1:2,24:26:72.07:686,72,0	1/1:6,12:18:51.04:475,51,0	1/1:2,25:27:75.12:724,75,0	1/1:2,36:38:96.15:927,96,0	1/1:2,21:23:60.10:579,60,0	1/1:3,23:26:72.06:684,72,0	1/1:2,19:21:57.05:542,57,0	1/1:1,15:16:48.06:457,48,0	1/1:3,9:11:24.04:232,24,0	1/1:4,14:18:42.06:405,42,0	1/1:5,13:18:42.05:400,42,0	1/1:2,18:20:45.07:435,45,0	1/1:2,23:25:66.05:628,66,0	1/1:1,17:18:51.08:492,51,0	1/1:2,19:21:51.08:492,51,0	1/1:4,17:21:54.08:522,54,0	1/1:3,39:42:99:1102,117,0	1/1:4,34:38:87.13:839,87,0	1/1:0,10:10:24.04:232,24,0
chr10	23744002	.	GA	G	10555.68	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-5.991;DP=620;FS=2.874;HRun=11;HaplotypeScore=80.3181;InbreedingCoeff=0.8220;MQ=69.87;MQ0=0;MQRankSum=-3.744;QD=17.71;ReadPosRankSum=4.477;VQSLOD=5.8047;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,13:20:37.96:301,38,0	1/1:2,11:13:0.97:214,1,0	0/0:14,0:13:7.94:0,8,183	0/0:10,0:10:24.03:0,24,234	1/1:3,30:33:86.87:714,87,0	1/1:4,26:30:77.91:640,78,0	1/1:3,12:15:32.96:271,33,0	1/1:3,27:30:77.89:640,78,0	1/1:3,16:20:49.97:400,50,0	1/1:6,23:30:67.88:545,68,0	1/1:4,21:25:27.91:436,28,0	1/1:5,14:19:41.92:345,42,0	1/1:10,24:35:41.93:540,42,0	1/1:2,13:15:41.95:345,42,0	1/1:0,34:34:95.87:788,96,0	1/1:5,14:19:24.34:324,24,0	1/1:1,16:17:47.94:394,48,0	1/1:0,12:12:32.96:271,33,0	1/1:6,13:19:14.87:314,15,0	1/1:6,33:39:57.85:682,58,0	1/1:1,6:7:17.98:148,18,0	1/1:7,16:23:53.91:440,54,0	1/1:8,18:26:59.88:488,60,0	1/1:1,12:13:32.95:271,33,0	1/1:4,29:33:83.88:689,84,0	1/1:8,1:32:55.78:177,56,0	1/1:5,0:31:50.55:149,51,0	1/1:0,0:5:10.19:29,10,0
chr10	23744069	.	T	TAA	1824.47	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-3.272;DP=660;FS=0.000;HRun=8;HaplotypeScore=94.1629;InbreedingCoeff=0.9815;MQ=75.18;MQ0=0;MQRankSum=-4.208;QD=27.64;ReadPosRankSum=-0.089;VQSLOD=3.3709;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,0:16:32.44:111,32,0	0/0:12,0:12:27.05:0,27,292	0/0:21,0:21:48.05:0,48,511	0/0:8,0:8:12.03:0,12,133	0/0:26,0:26:63.15:0,63,702	0/0:33,0:33:84.20:0,84,936	0/0:14,0:14:42.10:0,42,459	0/0:41,0:42:98.98:0,99,1082	0/0:21,0:21:63.17:0,63,702	0/0:30,0:30:69.16:0,69,769	0/0:35,0:35:90.22:0,90,1003	0/0:26,0:26:75.20:0,75,836	0/0:35,0:35:90.20:0,90,985	0/0:23,0:23:69.19:0,69,769	1/1:7,21:28:66.22:1018,66,0	1/1:3,18:22:54.18:838,54,0	0/0:25,0:25:69.17:0,69,769	0/0:13,0:13:33.08:0,33,367	0/0:21,0:21:57.14:0,57,627	0/0:35,0:35:93.24:0,93,1037	0/0:7,0:7:21.06:0,21,234	0/0:21,0:21:63.17:0,63,702	0/0:24,0:24:69.17:0,69,759	0/0:13,0:13:36.08:0,36,391	0/0:27,0:27:72.18:0,72,803	0/0:42,0:41:99:0,111,1215	0/0:35,0:35:93.23:0,93,1036	0/0:5,0:5:15.04:0,15,167
chr10	23744591	.	G	GT	2039.28	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-8.491;DP=681;FS=0.533;HRun=2;HaplotypeScore=63.6933;InbreedingCoeff=0.9983;MQ=95.32;MQ0=0;MQRankSum=-5.157;QD=38.48;ReadPosRankSum=3.710;VQSLOD=4.2231;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:93.25:0,93,1121	0/0:10,0:10:30.09:0,30,372	0/0:36,0:36:99:0,105,1261	0/0:27,0:27:74.58:0,75,874	0/0:36,0:36:99:0,102,1237	0/0:29,0:30:89.49:0,89,1082	0/0:24,0:24:66.19:0,66,805	0/0:33,0:33:96.27:0,96,1148	0/0:23,0:23:66.19:0,66,804	0/0:32,0:32:93.29:0,93,1153	0/0:23,0:23:66.18:0,66,792	0/0:23,0:23:66.21:0,66,818	0/0:29,0:29:87.25:0,87,1062	0/0:14,0:14:42.13:0,42,521	0/0:17,0:17:51.16:0,51,632	0/0:20,0:20:57.17:0,57,695	0/0:30,0:30:78.19:0,78,936	0/0:13,0:13:33.10:0,33,405	0/0:23,0:23:69.22:0,69,852	0/0:30,0:30:87.26:0,87,1066	0/0:36,0:36:99:0,105,1301	0/0:17,0:17:51.16:0,51,632	0/0:17,0:17:45.12:0,45,543	0/0:20,0:20:49.04:0,49,597	0/0:31,0:31:90.25:0,90,1089	1/1:0,16:16:48.14:669,48,0	1/1:1,28:30:84.28:1210,84,0	1/1:0,7:7:21.07:302,21,0
chr10	23745746	.	A	AGAG	17676.86	PASS	AB=1.000;AC=33;AF=0.589;AN=56;BaseQRankSum=-9.424;DP=694;FS=3.072;HRun=0;HaplotypeScore=96.6413;InbreedingCoeff=0.9262;MQ=64.96;MQ0=1;MQRankSum=-3.860;QD=44.19;ReadPosRankSum=1.765;VQSLOD=6.7141;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:78.18:0,78,1114	1/1:2,11:14:35.93:761,36,0	0/0:27,0:25:55.32:0,55,917	0/0:24,0:19:29.28:0,29,536	1/1:4,23:27:57.20:1206,57,0	1/1:7,18:27:54.19:1124,54,0	1/1:9,13:22:39.13:825,39,0	1/1:16,19:33:66.17:1248,66,0	1/1:2,20:23:63.22:1323,63,0	0/0:28,0:28:69.22:0,69,1012	0/0:24,0:24:60.20:0,60,912	1/1:5,17:22:57.20:1200,57,0	1/1:5,21:26:54.19:1141,54,0	1/1:4,13:17:24.08:508,24,0	0/0:33,0:33:84.28:0,84,1266	0/0:27,0:27:72.24:0,72,1093	0/0:21,0:21:54.16:0,54,776	0/1:22,0:22:22.37:22,0,667	0/0:26,0:26:54.14:0,54,772	0/0:28,0:28:81.26:0,81,1210	0/0:25,0:25:72.24:0,72,1093	1/1:1,20:22:60.21:1270,60,0	1/1:1,15:16:41.84:882,42,0	1/1:2,22:24:60.21:1271,60,0	1/1:4,21:27:60.21:1269,60,0	1/1:5,24:31:38.65:1593,39,0	1/1:3,22:26:57.20:1206,57,0	1/1:1,14:15:39.13:826,39,0
chr10	23745908	.	A	AC	12709.92	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=16.960;DP=612;FS=6.119;HRun=0;HaplotypeScore=121.3547;InbreedingCoeff=0.9954;MQ=71.64;MQ0=0;MQRankSum=-2.491;QD=39.84;ReadPosRankSum=2.537;VQSLOD=4.2941;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,1:49:99:0,130,1935	1/1:0,13:13:39.13:576,39,0	0/0:27,0:25:71.57:0,72,930	0/0:21,0:20:56.14:0,56,763	1/1:0,23:23:66.22:992,66,0	1/1:2,15:17:42.14:623,42,0	1/1:0,23:23:66.22:975,66,0	1/1:4,29:32:90.24:1249,90,0	1/1:0,22:22:60.20:884,60,0	0/0:17,0:17:51.16:0,51,699	0/0:16,0:16:48.14:0,48,638	1/1:0,18:18:48.16:712,48,0	1/1:0,26:26:69.23:1035,69,0	1/1:0,15:15:42.14:632,42,0	0/0:30,0:30:90.30:0,90,1258	0/0:23,0:23:69.23:0,69,965	0/0:22,0:22:63.20:0,63,864	0/0:14,0:14:39.13:0,39,544	0/0:17,0:17:51.17:0,51,713	0/0:30,0:30:90.27:0,90,1211	0/0:27,0:27:78.26:0,78,1090	1/1:0,15:14:36.12:523,36,0	1/1:0,22:22:60.20:878,60,0	1/1:0,17:17:45.07:642,45,0	1/1:0,22:22:63.21:932,63,0	1/1:2,21:23:24.25:870,24,0	1/1:0,25:25:69.23:1011,69,0	1/1:0,5:5:12.04:176,12,0
chr10	23746966	.	AG	A	8730.45	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=16.341;DP=617;FS=0.965;HRun=2;HaplotypeScore=121.3014;InbreedingCoeff=0.9970;MQ=61.84;MQ0=0;MQRankSum=-9.575;QD=34.24;ReadPosRankSum=-2.741;VQSLOD=3.8497;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,126,1832	1/1:0,7:7:21.07:272,21,0	0/0:22,0:21:54.17:0,54,788	0/0:16,0:16:41.88:0,42,569	1/1:4,28:32:86.86:974,87,0	1/1:4,26:30:87.24:1086,87,0	1/1:0,21:21:63.14:795,63,0	1/1:2,20:22:54.17:700,54,0	1/1:0,15:15:45.15:583,45,0	0/0:26,0:26:78.26:0,78,1168	0/0:25,0:25:72.23:0,72,1057	1/1:1,24:25:75.24:970,75,0	1/1:4,16:20:60.14:720,60,0	1/1:1,22:23:69.22:881,69,0	0/0:24,0:24:72.22:0,72,1041	0/0:19,0:19:57.16:0,57,813	0/0:30,0:30:90.26:0,90,1303	0/0:26,0:26:75.14:0,75,1071	0/0:15,0:15:45.14:0,45,656	0/0:25,0:25:72.23:0,72,1057	0/0:34,0:34:99:0,102,1443	1/1:1,18:19:56.97:661,57,0	1/1:1,18:19:51.03:618,51,0	1/1:4,11:15:26.91:289,27,0	1/1:2,5:7:15.04:181,15,0	0/0:24,0:24:72.22:0,72,1040	0/0:25,0:25:75.25:0,75,1122	0/0:9,0:9:27.09:0,27,404
chr10	23746996	.	T	TTA	15340.90	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=4.028;DP=653;FS=11.032;HRun=0;HaplotypeScore=111.9004;InbreedingCoeff=0.9984;MQ=63.50;MQ0=0;MQRankSum=-5.116;QD=45.12;ReadPosRankSum=-1.304;VQSLOD=4.6198;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,123,1707	1/1:0,6:6:18.06:324,18,0	0/0:24,0:23:60.17:0,60,786	0/0:33,0:33:96.30:0,96,1317	1/1:3,24:28:57.20:1021,57,0	1/1:3,26:29:84.29:1486,84,0	1/1:3,22:26:69.24:1228,69,0	1/1:6,28:34:84.29:1504,84,0	1/1:2,14:16:42.14:733,42,0	0/0:25,0:25:72.24:0,72,1009	0/0:27,0:27:69.23:0,69,965	1/1:3,21:24:38.15:1149,38,0	1/1:4,15:19:42.14:755,42,0	1/1:4,24:29:63.19:1132,63,0	0/0:21,0:21:57.19:0,57,798	0/0:21,0:21:57.19:0,57,798	0/0:23,0:23:63.18:0,63,846	0/0:30,0:30:78.26:0,78,1092	0/0:15,0:14:42.12:0,42,569	0/0:23,0:23:66.22:0,66,925	0/0:27,0:27:75.25:0,75,1049	1/1:1,17:18:48.16:860,48,0	1/1:2,12:15:36.12:647,36,0	1/1:4,18:22:45.15:809,45,0	1/1:0,9:9:24.08:432,24,0	1/1:1,25:26:72.21:1263,72,0	1/1:2,28:30:84.29:1511,84,0	1/1:0,9:9:27.09:486,27,0
chr10	23747269	.	CGGGCTTGT	C	15877.54	PASS	AB=0.536;AC=31;AF=0.554;AN=56;BaseQRankSum=16.975;DP=514;FS=0.000;HRun=0;HaplotypeScore=172.2913;InbreedingCoeff=0.9034;MQ=70.90;MQ0=0;MQRankSum=-16.333;QD=63.77;ReadPosRankSum=0.992;VQSLOD=4.5326;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:54.19:0,54,2372	1/1:1,3:4:9.03:257,9,0	0/0:24,0:24:54.69:0,55,2463	0/0:23,0:21:57.19:0,57,2299	1/1:3,10:13:21.07:602,21,0	1/1:4,8:12:21.07:601,21,0	1/1:2,14:16:30.10:859,30,0	1/1:7,12:19:36.12:956,36,0	0/1:2,13:15:95:991,0,95	0/0:18,0:18:51.18:0,51,2181	0/0:19,0:19:57.20:0,57,2421	1/1:3,30:33:78.27:2234,78,0	1/1:2,19:21:54.18:1547,54,0	1/1:1,17:18:48.16:1375,48,0	0/0:28,0:28:81.26:0,81,3513	0/0:17,0:17:51.18:0,51,2263	0/0:25,0:25:69.24:0,69,2960	0/0:22,0:22:63.19:0,63,2428	0/0:23,0:23:66.23:0,66,2894	0/0:29,0:29:84.29:0,84,3754	0/0:19,0:19:54.19:0,54,2300	1/1:4,8:12:21.07:601,21,0	1/1:0,20:20:44.72:1282,45,0	1/1:1,10:11:24.08:688,24,0	1/1:1,18:19:51.17:1461,51,0	1/1:2,12:14:36.11:963,36,0	1/1:1,18:19:45.15:1288,45,0	1/1:0,3:3:6.02:172,6,0
chr10	23747534	.	C	CATGT	6228.52	PASS	AB=0.853;AC=28;AF=0.538;AN=52;BaseQRankSum=-10.097;DP=626;FS=6.964;HRun=0;HaplotypeScore=129.2363;InbreedingCoeff=0.6414;MQ=58.13;MQ0=4;MQRankSum=3.687;QD=16.39;ReadPosRankSum=-1.715;VQSLOD=3.3630;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:16,13:32:11.90:163,12,0	1/1:5,6:11:12.04:282,12,0	./.	./.	1/1:19,18:37:51.17:963,51,0	1/1:8,13:22:18.06:422,18,0	1/1:9,11:21:6.02:141,6,0	1/1:39,0:39:14.99:173,15,0	1/1:14,14:29:8.15:679,8,0	0/0:12,0:24:3.61:0,4,173	0/0:7,0:19:24.03:0,24,222	1/1:12,13:26:18.06:422,18,0	0/1:17,14:32:13.27:640,0,13	1/1:12,16:28:39.13:915,39,0	0/0:36,0:36:63.21:0,63,973	0/0:18,0:18:24.08:0,24,371	0/0:11,0:15:3:0,3,28	0/0:13,0:15:5.47:0,5,37	0/1:9,0:15:1.93:2,0,108	0/0:15,0:31:24.03:0,24,223	0/1:17,0:17:0:0,0,0	1/1:8,6:14:15.05:285,15,0	0/1:12,7:19:35.18:197,0,35	1/1:9,6:16:12.04:282,12,0	1/1:15,6:21:33.10:663,33,0	0/0:11,0:21:14.99:0,15,133	0/0:14,0:24:17.96:0,18,158	0/0:12,0:19:6.01:0,6,56
chr10	23747671	.	GA	G	12786.70	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=14.332;DP=742;FS=4.230;HRun=5;HaplotypeScore=89.4452;InbreedingCoeff=0.9987;MQ=78.09;MQ0=4;MQRankSum=0.629;QD=29.74;ReadPosRankSum=4.829;VQSLOD=5.2107;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:66.03:0,66,797	1/1:1,7:8:18.05:204,18,0	0/0:40,0:36:80.82:0,81,1045	0/0:33,0:29:46.07:0,46,714	1/1:1,33:34:96.27:1088,96,0	1/1:2,35:37:99:1140,102,0	1/1:3,19:22:48.13:543,48,0	1/1:4,32:36:96.18:1038,96,0	1/1:3,27:30:75.21:850,75,0	0/0:24,0:24:72.23:0,72,964	0/0:18,0:18:54.15:0,54,696	1/1:0,29:29:81.23:918,81,0	1/1:3,35:38:99:1122,99,0	1/1:1,38:39:99:1156,102,0	0/0:33,0:33:99:0,99,1322	0/0:21,1:22:26.18:0,26,730	0/0:20,0:20:51.17:0,51,694	0/0:20,0:20:54.18:0,54,736	0/0:22,0:22:57.19:0,57,779	0/0:28,0:28:69.23:0,69,943	0/0:29,0:29:81.25:0,81,1084	1/1:0,17:17:39.11:442,39,0	1/1:0,25:25:66.17:748,66,0	1/1:0,21:21:57.16:646,57,0	1/1:1,25:26:72.21:816,72,0	1/1:1,24:25:34.13:750,34,0	1/1:2,24:26:72.20:816,72,0	1/1:0,17:17:45.13:510,45,0
chr10	23748085	.	T	TA	8290.42	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-15.539;DP=507;FS=4.136;HRun=5;HaplotypeScore=48.4278;InbreedingCoeff=0.9889;MQ=79.59;MQ0=0;MQRankSum=1.427;QD=34.69;ReadPosRankSum=0.198;VQSLOD=5.0279;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:30.09:0,30,370	1/1:2,8:10:15.05:216,15,0	0/0:16,0:16:36.11:0,36,446	0/0:9,0:9:19.53:0,20,213	1/1:0,24:24:63.21:907,63,0	1/1:1,25:26:72.24:1037,72,0	1/1:0,12:12:33.11:475,33,0	1/1:2,30:32:84.27:1188,84,0	1/1:0,14:14:36.12:518,36,0	0/0:23,0:23:69.22:0,69,856	0/0:18,0:18:54.16:0,54,658	1/1:0,18:18:45.15:648,45,0	1/1:1,18:19:23.95:346,24,0	1/1:2,24:27:69.22:977,69,0	0/0:22,0:21:63.18:0,63,763	0/0:20,1:21:13.98:0,14,626	0/0:20,0:20:57.05:0,57,704	0/0:25,0:25:75.24:0,75,926	0/0:10,0:10:24.08:0,24,298	0/0:29,0:29:78.24:0,78,965	0/0:9,0:9:27.08:0,27,335	1/1:1,12:13:27.09:388,27,0	1/1:1,20:21:54.18:778,54,0	1/1:0,5:5:12.04:164,12,0	1/1:2,16:18:45.15:648,45,0	0/0:31,0:31:90.28:0,90,1115	0/0:13,0:13:39.12:0,39,484	0/0:9,0:8:27.08:0,27,332
chr10	23750535	.	AT	A	10444.15	PASS	AB=0.969;AC=50;AF=0.893;AN=56;BaseQRankSum=1.104;DP=519;FS=0.000;HRun=9;HaplotypeScore=97.9454;InbreedingCoeff=0.6651;MQ=69.04;MQ0=2;MQRankSum=-2.739;QD=22.22;ReadPosRankSum=2.254;VQSLOD=5.0365;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,16:18:45.02:412,45,0	1/1:0,6:6:18.01:165,18,0	0/1:13,1:12:40.14:40,0,89	0/1:27,0:15:2.65:3,0,60	1/1:2,22:24:60.02:549,60,0	1/1:1,15:15:42.02:384,42,0	1/1:1,9:10:27.01:247,27,0	1/1:6,24:30:71.99:648,72,0	1/1:1,13:14:39.02:357,39,0	1/1:0,21:21:63.04:576,63,0	1/1:3,13:16:10.40:347,10,0	1/1:1,17:18:51.03:467,51,0	1/1:1,19:20:57.03:522,57,0	1/1:4,18:22:63.04:577,63,0	0/0:23,0:23:51.02:0,51,536	0/0:26,0:26:57.17:0,57,658	1/1:3,13:16:39.02:357,39,0	1/1:0,17:16:39.02:357,39,0	1/1:3,13:16:41.97:376,42,0	1/1:3,26:29:86.99:780,87,0	1/1:0,8:8:18.01:165,18,0	1/1:2,14:16:45.01:407,45,0	1/1:0,22:22:66.04:609,66,0	1/1:1,10:11:27.01:247,27,0	1/1:5,22:27:66.03:604,66,0	1/1:2,20:22:63.03:574,63,0	1/1:6,21:27:69:623,69,0	1/1:0,2:2:6:55,6,0
chr10	23750575	.	C	CA	2401.55	PASS	AB=0.992;AC=28;AF=0.500;AN=56;BaseQRankSum=10.603;DP=555;FS=6.460;HRun=7;HaplotypeScore=151.7717;InbreedingCoeff=-0.5347;MQ=56.49;MQ0=7;MQRankSum=-7.333;QD=4.98;ReadPosRankSum=5.968;VQSLOD=-0.2339;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:23:84.30:92,0,84	0/1:5,0:6:13.51:29,0,14	0/0:23,0:15:17.79:0,18,164	0/0:34,0:11:13.72:0,14,112	0/1:30,0:30:99:188,0,154	0/1:16,0:16:43.96:44,0,83	0/1:13,0:13:55.46:55,0,85	0/1:34,0:33:99:110,0,226	0/1:19,0:19:56.37:56,0,72	0/1:27,0:27:99:143,0,187	0/1:16,0:15:97.76:98,0,100	0/1:13,0:14:30.36:82,0,30	0/1:22,0:22:52.66:57,0,53	0/1:20,0:20:44.27:44,0,156	0/1:18,0:18:16.02:16,0,93	0/1:22,0:22:26.11:64,0,26	0/0:15,0:14:8.02:0,8,135	0/1:15,0:14:72.37:79,0,72	0/1:15,0:15:67.63:68,0,109	0/1:28,0:28:99:121,0,196	0/1:11,0:11:1.05:1,0,49	0/1:18,0:18:99:109,0,99	0/1:24,0:24:24.82:25,0,189	0/1:12,0:12:3.12:3,0,198	0/1:21,0:22:50.66:85,0,51	1/1:15,10:25:57.80:520,58,0	1/1:21,5:26:53.26:428,53,0	1/1:6,0:6:8.53:45,9,0
chr10	23750577	.	A	AAAAAAC	21625.27	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-0.840;DP=573;FS=5.055;HRun=0;HaplotypeScore=128.9363;InbreedingCoeff=0.8675;MQ=57.82;MQ0=7;MQRankSum=-3.024;QD=41.99;ReadPosRankSum=3.207;VQSLOD=4.6555;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,14:24:27.09:707,27,0	1/1:2,4:6:15.05:424,15,0	0/0:23,0:14:18.43:0,18,271	0/0:35,0:11:7.73:0,8,126	1/1:9,20:29:63.20:1505,63,0	1/1:5,11:17:30.10:850,30,0	1/1:9,4:14:27.09:735,27,0	1/1:21,0:32:57.17:1061,57,0	1/1:6,14:20:33.11:1012,33,0	1/1:11,15:28:60.13:1501,60,0	1/1:6,11:17:36.11:876,36,0	1/1:11,5:16:30.09:777,30,0	1/1:5,15:20:35.62:1095,36,0	1/1:11,9:20:48.15:1221,48,0	1/1:5,12:17:12.04:393,12,0	1/1:4,19:24:29.93:982,30,0	1/1:7,11:19:12.50:261,13,0	1/1:11,4:16:36.10:837,36,0	1/1:8,7:16:24.07:571,24,0	1/1:12,16:28:63.18:1542,63,0	1/1:6,6:13:12.03:225,12,0	1/1:5,11:17:39.12:913,39,0	1/1:10,11:23:33.10:700,33,0	1/1:10,0:11:15.02:222,15,0	1/1:16,7:24:60.15:1475,60,0	1/1:14,0:25:35.61:627,36,0	1/1:8,2:29:39.10:916,39,0	1/1:0,0:6:9.03:196,9,0
chr10	23751830	.	CAATG	C	9432.34	PASS	AC=48;AF=0.889;AN=54;BaseQRankSum=8.792;DP=539;FS=2.375;HRun=0;HaplotypeScore=91.3506;InbreedingCoeff=0.8492;MQ=65.19;MQ0=7;MQRankSum=1.958;QD=20.42;ReadPosRankSum=0.176;VQSLOD=4.0609;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,13:24:39.13:611,39,0	1/1:1,5:6:15.05:235,15,0	./.	0/0:15,0:12:3.01:0,3,58	1/1:17,12:29:30.10:470,30,0	1/1:11,18:28:39.13:611,39,0	1/1:8,9:17:21.07:329,21,0	1/1:22,9:29:29.97:307,30,0	1/1:9,7:15:12.04:188,12,0	1/1:7,18:24:54.18:829,54,0	1/1:10,9:19:24.08:375,24,0	1/1:6,11:17:27.09:423,27,0	1/1:10,15:25:33.11:517,33,0	1/1:12,18:30:33.11:517,33,0	0/0:21,0:21:42.14:0,42,970	0/0:22,0:22:54.19:0,54,1263	1/1:9,10:19:21.07:329,21,0	1/1:10,14:22:36.12:557,36,0	1/1:17,6:21:18.03:282,18,0	1/1:5,17:21:48.16:752,48,0	1/1:6,5:11:15.05:235,15,0	1/1:5,6:11:12.04:188,12,0	1/1:6,12:18:30.10:470,30,0	1/1:6,6:12:12.04:188,12,0	1/1:2,11:13:33.11:517,33,0	1/1:8,0:16:27.02:246,27,0	1/1:12,0:22:21.02:196,21,0	1/1:1,0:3:6.01:56,6,0
chr10	23752252	.	AT	A	8135.37	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-7.189;DP=480;FS=1.759;HRun=5;HaplotypeScore=57.1722;InbreedingCoeff=0.9461;MQ=71.93;MQ0=0;MQRankSum=-0.535;QD=27.21;ReadPosRankSum=2.096;VQSLOD=4.9153;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,21:23:63.18:713,63,0	1/1:0,5:5:15.04:170,15,0	0/0:14,0:8:6.13:0,6,115	0/0:11,0:9:10.64:0,11,100	1/1:0,31:31:78.07:850,78,0	1/1:2,17:19:42.12:475,42,0	1/1:0,14:14:24.07:272,24,0	1/1:4,29:33:87.20:957,87,0	1/1:1,10:11:30.09:340,30,0	0/0:18,0:18:51.04:0,51,476	0/0:26,0:26:71.96:0,72,635	1/1:1,7:8:9.03:102,9,0	1/1:0,16:16:45.13:507,45,0	1/1:1,14:15:36.10:407,36,0	0/0:18,0:18:51.16:0,51,681	0/0:17,1:18:11.12:0,11,494	0/0:17,0:17:41.97:0,42,366	0/0:16,0:16:45.02:0,45,405	0/0:15,0:15:32.56:0,33,276	0/0:25,0:25:66.01:0,66,590	0/0:3,0:3:5.99:0,6,51	1/1:0,11:11:24.07:271,24,0	1/1:0,18:18:45.04:481,45,0	1/1:1,6:7:18.05:204,18,0	1/1:1,21:22:54.15:610,54,0	1/1:0,18:18:54.12:592,54,0	1/1:3,27:30:60.17:675,60,0	1/1:2,16:18:45.13:510,45,0
chr10	23752257	.	T	TA	2875.34	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-13.305;DP=476;FS=8.273;HRun=9;HaplotypeScore=77.2916;InbreedingCoeff=0.9277;MQ=74.45;MQ0=0;MQRankSum=-0.130;QD=25.67;ReadPosRankSum=1.690;VQSLOD=4.1941;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:61.50:0,62,297	0/0:6,0:6:17:0,17,88	0/0:19,0:11:20.36:0,20,137	0/0:12,0:10:8.40:0,8,52	0/0:34,0:34:81.67:0,82,418	0/0:19,0:19:45.09:0,45,227	0/0:15,0:15:25.36:0,25,128	0/0:33,0:33:84.65:0,85,427	0/0:11,0:11:31.02:0,31,153	1/1:2,14:16:42.11:464,42,0	1/1:3,21:24:63.13:682,63,0	0/0:7,0:7:8.52:0,9,41	0/0:17,0:17:43.88:0,44,214	0/0:15,0:15:36.54:0,37,180	0/0:18,0:18:23.70:0,24,366	0/0:15,1:16:8.67:0,9,290	1/1:3,14:17:36.10:397,36,0	1/1:1,16:17:45.12:496,45,0	1/1:2,11:13:36.08:379,36,0	1/1:3,19:22:57.11:616,57,0	1/1:1,2:3:3.01:33,3,0	0/0:11,0:11:28.27:0,28,140	0/0:18,0:18:36.18:0,36,172	0/0:6,0:6:16.79:0,17,80	0/0:22,0:22:53.42:0,53,255	0/0:18,0:18:48.16:0,48,235	0/0:28,0:28:56.08:0,56,269	0/0:16,0:16:41.97:0,42,200
chr10	23752453	.	T	TTGTGTG	4740.24	PASS	AB=0.938;AC=46;AF=0.885;AN=52;BaseQRankSum=1.627;DP=501;FS=2.256;HRun=0;HaplotypeScore=152.3433;InbreedingCoeff=-0.1544;MQ=57.02;MQ0=17;MQRankSum=-2.955;QD=11.45;ReadPosRankSum=-3.959;VQSLOD=3.2240;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:23:49.47:49,0,99	1/1:6,0:6:7.84:105,8,0	./.	./.	1/1:23,1:24:17.84:275,18,0	1/1:25,0:25:15.05:311,15,0	1/1:17,0:17:11.57:107,12,0	1/1:33,0:32:22.51:327,23,0	1/1:9,0:9:9.03:190,9,0	0/1:4,0:10:48.15:127,0,48	1/1:11,0:12:17.85:245,18,0	1/1:6,0:6:13.11:209,13,0	1/1:14,0:13:15.05:338,15,0	1/1:17,0:17:8.45:85,8,0	0/1:12,0:12:2:225,0,2	1/1:10,0:10:11.62:183,12,0	1/1:7,0:35:42.44:530,42,0	1/1:4,0:18:15.05:193,15,0	1/1:5,0:11:8.66:201,9,0	1/1:7,0:15:2.10:37,2,0	1/1:14,0:29:2.71:38,3,0	1/1:10,0:10:6.02:122,6,0	1/1:12,0:12:9.03:146,9,0	1/1:9,0:7:3.01:37,3,0	1/1:16,0:16:30.06:567,30,0	0/1:17,0:17:10.86:11,0,206	0/1:13,0:14:32.20:60,0,32	0/1:10,0:9:24.04:24,0,134
chr10	23752479	.	G	GTT	1238.24	PASS	AB=0.980;AC=23;AF=0.426;AN=54;BaseQRankSum=6.940;DP=497;FS=3.872;HRun=1;HaplotypeScore=130.0875;InbreedingCoeff=-0.1235;MQ=50.42;MQ0=11;MQRankSum=-3.053;QD=3.53;ReadPosRankSum=4.881;VQSLOD=-0.5567;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:32,0:32:10.82:11,0,80	1/1:8,0:8:5.89:39,6,0	0/0:17,0:6:10.43:0,10,78	0/0:13,0:5:10.56:0,11,95	0/1:25,0:25:1.39:250,0,1	0/1:24,0:24:50.16:60,0,50	0/1:14,11:25:10.85:11,0,59	0/1:44,0:43:99:323,0,191	0/1:7,0:7:31.32:31,0,36	0/1:11,0:11:54.42:54,0,108	0/0:14,0:14:0.26:0,0,87	1/1:11,0:11:14.39:87,14,0	1/1:13,0:12:14.99:141,15,0	0/1:19,0:19:10.01:45,0,10	0/1:13,0:13:9.29:43,0,9	0/1:15,0:15:22.34:22,0,56	0/1:34,0:34:56.15:79,0,56	0/0:24,0:24:15.60:0,16,145	0/1:9,0:9:10.41:10,0,46	0/1:13,0:13:7.25:7,0,82	0/0:24,0:24:17.79:0,18,141	0/1:11,0:11:16.39:16,0,53	0/1:14,0:14:15.30:28,0,15	./.	1/1:23,0:23:21.81:147,22,0	0/0:15,0:15:36.75:0,37,322	0/0:16,0:16:24.11:0,24,130	0/0:11,0:10:14.57:0,15,132
chr10	23752482	.	T	TGCGC	1617.95	PASS	AB=0.976;AC=30;AF=0.536;AN=56;BaseQRankSum=5.142;DP=491;FS=5.985;HRun=0;HaplotypeScore=151.4531;InbreedingCoeff=-0.1711;MQ=51.09;MQ0=4;MQRankSum=-5.622;QD=4.30;ReadPosRankSum=6.750;VQSLOD=1.6485;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:31,2:33:11.87:209,12,0	0/1:8,0:8:4.46:9,0,4	1/1:9,0:2:1.24:3,1,0	0/0:5,0:4:5.67:0,6,35	0/0:26,0:26:35.13:0,35,400	0/1:26,0:26:25.84:26,0,35	0/0:24,0:24:16.87:0,17,168	0/0:45,0:44:74.03:0,74,782	1/1:6,0:6:6.07:27,6,0	0/0:14,0:14:11.36:0,11,337	0/1:14,0:14:38.96:39,0,204	0/1:12,0:12:19.42:19,0,52	0/1:13,0:12:28.03:51,0,28	0/1:18,0:18:5.50:6,0,86	0/1:13,0:13:75.70:76,0,77	0/1:15,0:15:30.47:46,0,30	0/1:35,0:35:99:237,0,230	0/1:25,0:25:78.28:78,0,246	0/1:10,0:10:19.27:19,0,128	0/1:13,0:13:3.79:4,0,202	0/1:24,0:24:3.20:3,0,194	0/1:11,0:11:5.97:6,0,49	1/1:12,0:12:7.81:32,8,0	1/1:12,0:10:0.80:3,1,0	0/1:23,0:23:14.49:48,0,14	0/1:5,9:14:10.83:299,0,11	1/1:4,11:16:4.07:391,4,0	1/1:5,6:13:5.73:146,6,0
chr10	23752484	.	T	TGTGTTTGTGC	8538.42	PASS	AB=0.935;AC=35;AF=0.625;AN=56;BaseQRankSum=-5.960;DP=504;FS=2.883;HRun=0;HaplotypeScore=162.4515;InbreedingCoeff=0.5516;MQ=51.17;MQ0=4;MQRankSum=-7.164;QD=23.85;ReadPosRankSum=-3.912;VQSLOD=3.6740;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:17,0:33:31.19:31,0,176	1/1:3,5:8:14.84:345,15,0	0/1:8,0:1:0:0,0,0	0/0:5,0:3:2.92:0,3,17	1/1:27,0:27:53.12:772,53,0	1/1:5,17:30:21.54:750,22,0	1/1:22,0:22:22.92:352,23,0	1/1:46,0:45:99:1881,117,0	1/1:1,5:7:9.03:399,9,0	0/0:15,0:15:34.37:0,34,477	0/1:14,0:14:22.63:23,0,171	1/1:2,11:14:18.05:542,18,0	1/1:2,10:13:3.09:719,3,0	1/1:5,13:20:23.59:508,24,0	1/1:9,0:13:16.45:166,16,0	1/1:12,0:14:4.48:85,4,0	0/0:34,0:34:50.16:0,50,425	0/0:26,0:26:36:0,36,346	0/1:9,0:9:30.58:31,0,146	0/0:12,0:12:16.87:0,17,243	0/0:22,0:22:13.47:0,13,190	1/1:3,6:11:15.05:380,15,0	1/1:4,8:14:12.04:273,12,0	1/1:4,7:12:3.01:37,3,0	1/1:5,17:25:33.07:1209,33,0	0/0:13,0:14:29.31:0,29,380	0/0:17,0:18:15.83:0,16,143	0/1:15,0:14:36.12:36,0,187
chr10	23752798	.	CTT	C	11379.55	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-6.182;DP=430;FS=3.818;HRun=10;HaplotypeScore=57.3190;InbreedingCoeff=0.9010;MQ=71.50;MQ0=0;MQRankSum=-5.523;QD=27.69;ReadPosRankSum=5.310;VQSLOD=4.8842;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,17:18:45.12:502,45,0	1/1:1,2:3:3:33,3,0	0/0:9,0:8:18.78:0,19,216	0/0:8,0:9:19.73:0,20,237	1/1:2,23:25:63.15:701,63,0	1/1:1,17:18:39.10:435,39,0	1/1:1,9:10:24.06:268,24,0	1/1:8,23:31:66.14:726,66,0	1/1:0,16:16:45.12:502,45,0	1/1:2,16:18:48.11:527,48,0	1/1:1,17:18:45.11:502,45,0	1/1:0,7:7:17.97:201,18,0	1/1:2,12:14:36.09:401,36,0	1/1:0,14:14:33.09:367,33,0	1/1:2,15:17:36.09:401,36,0	1/1:1,13:14:36.09:401,36,0	1/1:1,18:19:48.13:535,48,0	1/1:0,14:14:39.11:434,39,0	1/1:3,17:20:51.13:569,51,0	1/1:2,27:29:63.15:698,63,0	1/1:0,9:9:21.06:234,21,0	1/1:0,12:12:33.09:368,33,0	1/1:1,12:13:33.09:368,33,0	1/1:0,7:7:21.06:234,21,0	1/1:3,11:14:33.08:368,33,0	1/1:0,21:21:63.17:702,63,0	1/1:1,20:21:54.15:602,54,0	1/1:0,9:9:27.07:301,27,0
chr10	23753126	.	TACAC	T	2041.96	PASS	AB=0.866;AC=40;AF=0.769;AN=52;BaseQRankSum=4.177;DP=495;FS=0.000;HRun=0;HaplotypeScore=111.2884;InbreedingCoeff=0.4151;MQ=64.32;MQ0=6;MQRankSum=-2.789;QD=5.88;ReadPosRankSum=3.563;VQSLOD=2.1267;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:23.95:0,24,341	1/1:4,2:6:3.01:47,3,0	./.	0/0:24,0:17:0:0,0,0	1/1:20,4:25:1.84:155,2,0	1/1:12,4:16:6.02:94,6,0	1/1:9,1:10:3.01:47,3,0	0/0:17,0:17:2.69:0,3,8	1/1:9,2:12:6.01:75,6,0	1/1:8,0:18:12.01:112,12,0	1/1:18,0:24:12.01:112,12,0	0/1:10,4:14:44.65:85,0,45	1/1:10,0:11:6:56,6,0	1/1:17,3:20:6.02:94,6,0	0/0:18,0:29:42.13:0,42,778	0/0:11,0:17:14.76:0,15,180	0/1:20,0:21:19.87:21,0,20	1/1:10,0:13:6.08:79,6,0	1/1:3,0:9:9.01:84,9,0	1/1:11,0:24:30.03:279,30,0	./.	1/1:16,3:19:6.02:93,6,0	1/1:10,3:13:6.02:94,6,0	1/1:17,5:22:9.50:141,10,0	1/1:14,3:16:12:161,12,0	1/1:11,5:18:15.02:173,15,0	1/1:14,2:16:7.83:99,8,0	1/1:12,4:16:6.02:94,6,0
chr10	23753266	.	G	GA	25028.54	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-9.493;DP=672;FS=4.876;HRun=1;HaplotypeScore=65.0210;InbreedingCoeff=0.9976;MQ=91.68;MQ0=0;MQRankSum=-12.348;QD=40.96;ReadPosRankSum=6.543;VQSLOD=4.8877;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,33:34:90.30:1349,90,0	1/1:0,11:11:24.08:360,24,0	0/0:25,0:25:72.21:0,72,909	0/0:36,0:36:95.10:0,95,1170	1/1:2,24:26:63.21:944,63,0	1/1:0,17:17:48.16:719,48,0	1/1:1,21:22:54.18:809,54,0	1/1:0,13:13:39.13:580,39,0	1/1:0,23:23:66.22:988,66,0	1/1:0,41:41:99:1799,120,0	1/1:1,17:18:48.16:720,48,0	1/1:1,24:25:72.24:1078,72,0	1/1:1,22:23:60.20:898,60,0	1/1:3,25:29:75.25:1115,75,0	1/1:0,36:36:99:1484,99,0	1/1:0,20:20:57.19:854,57,0	1/1:0,39:39:99:1753,117,0	1/1:0,8:8:24.08:359,24,0	1/1:0,25:25:75.23:1100,75,0	1/1:1,31:32:93.27:1369,93,0	1/1:1,25:26:72.24:1079,72,0	1/1:1,28:29:84.28:1259,84,0	1/1:1,19:20:54.18:794,54,0	1/1:0,21:21:45.15:674,45,0	1/1:1,19:20:57.17:832,57,0	1/1:0,18:18:51.17:764,51,0	1/1:0,20:20:60.20:899,60,0	1/1:0,15:15:30.10:450,30,0
chr10	23753356	.	G	GCA	8776.42	PASS	AB=0.947;AC=47;AF=0.839;AN=56;BaseQRankSum=-4.791;DP=684;FS=0.533;HRun=0;HaplotypeScore=191.7115;InbreedingCoeff=0.7263;MQ=54.38;MQ0=9;MQRankSum=0.405;QD=14.98;ReadPosRankSum=1.133;VQSLOD=4.7134;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:17,12:29:44.34:643,44,0	1/1:10,0:14:13.78:97,14,0	0/0:26,0:16:7.49:0,7,123	0/0:33,0:20:8.69:0,9,146	1/1:26,0:30:22.54:177,23,0	1/1:23,0:25:19.48:137,19,0	1/1:18,0:18:8.79:32,9,0	1/1:29,0:28:43.21:418,43,0	1/1:24,0:24:20.08:143,20,0	1/1:3,12:16:30.07:445,30,0	1/1:15,17:31:25.03:853,25,0	1/1:22,0:21:13.77:98,14,0	1/1:19,0:20:14.50:126,14,0	1/1:35,0:35:11.93:109,12,0	1/1:12,0:24:42.01:403,42,0	1/1:10,0:24:57:520,57,0	1/1:9,20:29:64.77:995,65,0	1/1:4,13:17:9:583,9,0	1/1:13,7:21:18.95:433,19,0	1/1:8,14:23:54.16:803,54,0	1/1:14,24:38:87.30:1362,87,0	1/1:30,0:32:17.22:198,17,0	1/1:14,0:16:5.75:57,6,0	1/1:20,0:21:4.25:29,4,0	1/1:24,0:25:14.32:99,14,0	0/1:6,1:16:12.95:13,0,120	0/0:7,0:26:53.35:0,53,259	0/0:0,0:13:36.93:0,37,182
chr10	23753662	.	GTT	G	10070.44	PASS	AB=0.929;AC=39;AF=0.696;AN=56;BaseQRankSum=9.318;DP=516;FS=0.384;HRun=10;HaplotypeScore=66.5956;InbreedingCoeff=0.9179;MQ=69.44;MQ0=4;MQRankSum=-2.288;QD=26.50;ReadPosRankSum=2.965;VQSLOD=4.8077;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,16:19:42.11:468,42,0	1/1:1,10:11:30.08:334,30,0	0/1:12,0:12:5.85:6,0,177	0/0:6,0:6:9.02:0,9,123	1/1:2,34:36:96.20:1054,96,0	1/1:1,23:24:60.16:669,60,0	1/1:3,4:7:12.02:134,12,0	1/1:6,24:30:72.18:802,72,0	1/1:2,17:19:42.11:468,42,0	0/0:18,0:20:51.90:0,52,773	0/0:23,0:25:71.67:0,72,1049	1/1:2,14:15:39.10:435,39,0	1/1:2,16:18:45.12:502,45,0	1/1:1,13:14:33.09:368,33,0	1/1:0,19:19:51.14:569,51,0	1/1:0,16:15:45.12:501,45,0	0/0:23,0:23:63.21:0,63,991	0/0:11,0:11:30.10:0,30,476	0/0:17,0:18:44.64:0,45,675	0/0:21,0:22:59.69:0,60,911	0/0:11,0:11:27.09:0,27,428	1/1:2,18:20:48.12:533,48,0	1/1:2,14:16:39.05:419,39,0	1/1:0,7:7:21.06:234,21,0	1/1:1,16:16:45.12:502,45,0	1/1:3,25:28:72.18:803,72,0	1/1:6,27:32:66.15:736,66,0	1/1:1,16:17:48.13:535,48,0
chr10	23756413	.	AAAAAC	A	12149.12	PASS	AB=0.725;AC=31;AF=0.554;AN=56;BaseQRankSum=15.197;DP=660;FS=3.726;HRun=0;HaplotypeScore=154.6913;InbreedingCoeff=0.9440;MQ=61.47;MQ0=2;MQRankSum=-15.600;QD=33.75;ReadPosRankSum=-0.739;VQSLOD=4.6604;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,8:17:30.10:528,30,0	1/1:0,10:10:27.09:502,27,0	0/0:24,0:16:17.95:0,18,358	0/0:27,0:18:23.29:0,23,517	1/1:10,21:31:48.12:850,48,0	1/1:8,13:21:42.14:775,42,0	1/1:5,8:13:21.03:354,21,0	0/1:18,11:29:3.69:524,0,4	1/1:11,18:29:54.19:1003,54,0	0/0:26,0:26:60.21:0,60,1717	0/0:28,0:28:72.25:0,72,2047	1/1:12,9:21:33.11:608,33,0	1/1:9,13:22:45.14:804,45,0	1/1:9,8:17:30.10:558,30,0	1/1:11,22:32:72.24:1298,72,0	1/1:7,23:30:60.21:1115,60,0	0/0:40,0:40:84.29:0,84,2392	0/0:16,0:16:28.34:0,28,763	0/0:15,0:15:21.07:0,21,601	0/0:33,0:33:71.83:0,72,1870	0/0:16,0:16:39.12:0,39,960	1/1:12,16:28:42.14:781,42,0	1/1:4,14:18:45.15:831,45,0	1/1:6,5:11:15.05:279,15,0	1/1:5,25:30:72.25:1338,72,0	0/0:29,0:29:57.20:0,57,1611	0/0:34,0:34:75.26:0,75,2022	0/0:12,0:12:33.11:0,33,944
chr10	23756508	.	T	TA	10284.45	PASS	AB=0.667;AC=37;AF=0.661;AN=56;BaseQRankSum=-5.779;DP=577;FS=4.315;HRun=9;HaplotypeScore=64.6817;InbreedingCoeff=0.9204;MQ=77.52;MQ0=0;MQRankSum=-1.471;QD=25.52;ReadPosRankSum=0.622;VQSLOD=5.6652;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:25:48.18:253,48,0	0/1:2,2:4:17.03:57,0,17	0/0:13,0:14:20.97:0,21,182	0/0:12,0:12:22.36:0,22,169	1/1:5,28:33:81.19:883,81,0	1/1:2,16:18:36.10:398,36,0	1/1:4,15:19:39.11:431,39,0	1/1:6,21:27:63.16:688,63,0	1/1:1,14:16:44.95:479,45,0	0/0:21,0:21:56.99:0,57,495	0/0:22,0:22:53.97:0,54,469	1/1:1,23:24:66.18:730,66,0	1/1:2,23:25:40.19:671,40,0	1/1:3,16:19:42.11:465,42,0	1/1:2,35:36:73.21:1036,73,0	1/1:8,13:21:45.12:498,45,0	0/0:25,0:25:65.96:0,66,573	0/0:18,0:18:47.99:0,48,417	0/0:25,0:25:56.95:0,57,488	0/0:22,1:23:29.77:0,30,480	0/0:14,0:14:35.99:0,36,313	1/1:5,13:18:45.11:489,45,0	1/1:1,18:20:56.99:612,57,0	1/1:3,12:15:36.10:398,36,0	1/1:1,18:19:31.10:571,31,0	1/1:5,14:19:39.11:431,39,0	1/1:3,29:32:78.21:863,78,0	1/1:2,10:12:30.08:332,30,0
chr10	23759233	.	A	AT	11708.39	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=-10.453;DP=542;FS=0.699;HRun=3;HaplotypeScore=59.5031;InbreedingCoeff=0.9905;MQ=73.97;MQ0=0;MQRankSum=-2.374;QD=36.03;ReadPosRankSum=0.149;VQSLOD=5.2195;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,24:24:54.18:756,54,0	1/1:3,9:12:30.57:421,31,0	0/0:10,0:10:21.06:0,21,243	0/0:10,0:10:14.30:0,14,173	1/1:2,23:25:66.22:912,66,0	1/1:0,22:22:63.21:882,63,0	1/1:0,10:10:30.10:420,30,0	1/1:2,43:45:99:1749,129,0	1/1:2,19:21:51.17:713,51,0	0/0:26,0:26:78.23:0,78,927	0/0:23,0:23:66.20:0,66,789	1/1:0,20:20:54.18:756,54,0	1/1:0,25:25:63.21:882,63,0	1/1:1,16:17:45.15:630,45,0	1/1:6,21:27:72.22:971,72,0	1/1:4,16:20:60.18:805,60,0	0/0:20,0:20:54.14:0,54,634	0/0:5,0:5:12.04:0,12,144	0/0:19,0:19:54.16:0,54,638	0/0:29,0:29:72.19:0,72,840	0/0:9,0:9:27.08:0,27,324	1/1:3,14:17:42.10:557,42,0	1/1:1,21:22:51.09:714,51,0	1/1:0,9:9:21.07:288,21,0	1/1:1,8:9:18.06:252,18,0	0/0:24,0:24:69.20:0,69,817	0/0:31,0:30:87.24:0,87,1019	0/0:11,0:11:33.10:0,33,396
chr10	23759255	.	AT	A	2190.57	PASS	AB=0.909;AC=13;AF=0.232;AN=56;BaseQRankSum=3.733;DP=510;FS=0.851;HRun=10;HaplotypeScore=81.7885;InbreedingCoeff=0.6843;MQ=73.97;MQ0=0;MQRankSum=-4.972;QD=14.22;ReadPosRankSum=1.169;VQSLOD=3.9942;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:54.13:0,54,585	0/0:11,0:11:30.08:0,30,332	0/1:11,1:12:4.71:5,0,147	0/0:10,0:10:10.85:0,11,124	0/0:20,0:20:39.11:0,39,431	0/0:25,0:25:63.17:0,63,697	0/0:14,0:14:39.10:0,39,425	0/0:36,1:37:58.18:0,58,870	0/1:17,2:19:3.98:4,0,409	0/0:19,1:20:25.08:0,25,499	0/0:21,0:22:56.99:0,57,611	0/0:20,0:20:45.12:0,45,491	0/0:25,1:26:43.12:0,43,697	0/0:18,1:19:25.08:0,25,495	1/1:2,26:28:77.97:677,78,0	1/1:3,17:20:50.99:443,51,0	0/0:22,0:22:63.17:0,63,697	0/0:1,0:1:3.01:0,3,33	0/0:15,0:15:39.11:0,39,431	0/0:23,1:24:34.11:0,34,604	0/0:10,0:10:24.06:0,24,266	0/0:14,1:16:9.81:0,10,290	0/1:16,2:18:32.93:33,0,353	0/0:7,0:7:15:0,15,152	0/0:11,1:12:10.06:0,10,319	1/1:5,21:26:32.74:503,33,0	1/1:2,23:25:68.97:599,69,0	1/1:2,4:6:11.99:104,12,0
chr10	23760332	.	G	GC	11533.47	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-17.515;DP=707;FS=0.000;HRun=4;HaplotypeScore=61.3654;InbreedingCoeff=0.9993;MQ=68.74;MQ0=0;MQRankSum=-0.188;QD=35.06;ReadPosRankSum=0.966;VQSLOD=5.2065;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,111,1258	1/1:0,7:7:21.07:287,21,0	0/0:27,0:26:36.12:0,36,559	0/0:34,0:34:96.21:0,96,1049	1/1:1,37:38:99:1510,111,0	1/1:0,28:28:60.20:820,60,0	1/1:1,24:25:66.22:903,66,0	1/1:4,27:31:78.21:1016,78,0	1/1:0,19:19:51.17:696,51,0	0/0:29,0:29:81.23:0,81,913	0/0:24,0:24:69.20:0,69,782	1/1:2,20:22:60.20:821,60,0	1/1:0,26:26:72.24:984,72,0	1/1:0,30:30:75.25:1026,75,0	0/0:25,0:25:75.18:0,75,829	0/0:20,0:20:60.15:0,60,663	0/0:26,0:26:78.22:0,78,885	0/0:11,0:11:30.09:0,30,340	0/0:31,0:31:78.17:0,78,855	0/0:23,0:23:69.20:0,69,782	0/0:25,0:25:75.21:0,75,850	1/1:5,20:25:51.15:680,51,0	1/1:1,19:20:54.12:739,54,0	1/1:0,25:25:57.19:780,57,0	1/1:0,33:33:93.31:1271,93,0	0/0:35,0:35:99:0,102,1140	0/0:19,0:19:51.14:0,51,578	0/0:10,0:10:30.09:0,30,340
chr10	23760921	.	TATGTGTTCCC	T	6258.62	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=12.153;DP=705;FS=7.487;HRun=0;HaplotypeScore=216.8189;InbreedingCoeff=0.9983;MQ=91.79;MQ0=0;MQRankSum=-11.934;QD=90.70;ReadPosRankSum=4.481;VQSLOD=3.9066;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:90.30:0,90,4678	0/0:12,0:12:36.12:0,36,1926	0/0:24,0:24:72.23:0,72,3186	0/0:38,0:38:99:0,109,4392	0/0:28,0:28:84.29:0,84,4431	0/0:24,0:24:72.25:0,72,3734	0/0:23,0:23:69.24:0,69,3424	0/0:34,0:34:99:0,102,5331	0/0:26,0:26:78.27:0,78,4155	0/0:27,0:27:81.27:0,81,4081	0/0:19,0:19:54.19:0,54,2930	0/0:21,0:21:60.21:0,60,3045	0/0:23,0:23:69.22:0,69,3400	0/0:31,0:31:93.32:0,93,4819	0/0:35,0:35:99:0,105,5597	0/0:27,0:27:78.23:0,78,3697	0/0:46,0:46:99:0,138,7376	0/0:7,0:7:21.04:0,21,1009	0/0:28,0:28:84.29:0,84,3994	0/0:32,0:32:96.33:0,96,4843	0/0:21,0:21:60.21:0,60,3227	0/0:23,0:23:66.21:0,66,3285	0/0:10,0:10:30.10:0,30,1611	0/0:29,0:29:87.25:0,87,4424	0/0:18,0:18:54.16:0,54,2559	1/1:0,26:26:78.25:2642,78,0	1/1:0,30:31:69.24:2359,69,0	1/1:0,12:12:36.12:1257,36,0
chr10	23761436	.	CT	C	4068.51	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=14.618;DP=730;FS=0.376;HRun=2;HaplotypeScore=82.4005;InbreedingCoeff=0.9705;MQ=79.27;MQ0=0;MQRankSum=-5.545;QD=32.81;ReadPosRankSum=4.051;VQSLOD=3.6586;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,42:44:99:1458,114,0	0/0:14,0:14:39.11:0,39,545	0/0:18,0:18:54.11:0,54,683	0/0:22,0:22:54.04:0,54,714	0/0:39,0:39:99:0,114,1604	0/0:29,0:29:87.26:0,87,1279	0/0:10,0:10:30.09:0,30,432	0/0:34,0:34:96.29:0,96,1353	0/0:24,0:24:72.22:0,72,1040	0/0:46,0:46:99:0,132,1910	0/0:20,0:20:60.17:0,60,840	0/0:23,0:23:69.22:0,69,1012	0/0:39,0:39:99:0,116,1680	0/0:29,0:29:81.25:0,81,1173	0/0:34,0:34:99:0,102,1505	0/0:28,0:28:84.25:0,84,1200	0/0:28,0:28:84.28:0,84,1257	0/0:9,0:9:27.09:0,27,404	0/0:25,0:25:75.21:0,75,1047	0/0:23,0:23:66.18:0,66,910	0/0:15,0:15:45.11:0,45,614	0/0:22,0:22:63.20:0,63,923	0/0:27,0:27:81.26:0,81,1193	0/0:25,0:25:75.21:0,75,1060	0/0:23,0:23:69.22:0,69,1015	1/1:3,30:33:6.38:1062,6,0	1/1:0,39:39:99:1276,99,0	1/1:1,7:8:21.07:271,21,0
chr10	23761679	.	TATCTCTAATTGA	T	4178.39	PASS	AB=0.514;AC=5;AF=0.089;AN=56;BaseQRankSum=10.180;DP=641;FS=2.937;HRun=0;HaplotypeScore=219.6909;InbreedingCoeff=0.7632;MQ=68.78;MQ0=5;MQRankSum=-7.758;QD=92.85;ReadPosRankSum=0.747;VQSLOD=3.5666;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,114,6729	0/0:9,0:9:27.09:0,27,1666	0/0:26,0:19:57.18:0,57,2867	0/0:28,0:24:63.69:0,64,3432	0/0:27,0:27:78.27:0,78,4561	0/0:24,0:24:69.24:0,69,4008	0/0:17,0:17:51.18:0,51,3243	0/0:31,0:31:93.32:0,93,5216	0/0:30,0:30:90.30:0,90,5470	0/0:32,0:32:96.33:0,96,5648	0/0:18,0:18:54.19:0,54,3215	0/0:23,0:23:69.24:0,69,4252	0/0:19,0:19:57.20:0,57,3361	0/0:19,0:19:57.20:0,57,3224	0/0:28,0:28:84.29:0,84,5250	0/0:25,0:25:75.26:0,75,4319	0/0:22,0:22:66.23:0,66,3922	0/0:7,0:7:21.07:0,21,1280	0/0:26,0:23:68.80:0,69,3838	0/0:24,0:24:72.25:0,72,4199	0/0:32,0:32:96.33:0,96,5544	0/0:17,0:17:51.18:0,51,2980	0/0:21,0:21:63.22:0,63,3819	0/0:28,0:28:81.28:0,81,4870	0/0:24,0:24:66.23:0,66,3803	0/1:1,17:18:99:1471,0,140	1/1:2,21:23:57.20:2232,57,0	1/1:0,4:4:12.04:475,12,0
chr10	23762718	.	CA	C	1551.45	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.449;DP=623;FS=4.513;HRun=3;HaplotypeScore=63.9254;InbreedingCoeff=0.9949;MQ=80.28;MQ0=0;MQRankSum=-2.052;QD=31.03;ReadPosRankSum=1.705;VQSLOD=3.7453;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:60.15:0,60,822	0/0:10,0:10:30.10:0,30,432	0/0:14,0:14:39.10:0,39,525	0/0:18,0:18:51.13:0,51,664	0/0:41,0:41:99:0,111,1580	0/0:31,0:31:90.30:0,90,1295	0/0:15,0:15:45.15:0,45,647	0/0:31,0:31:87.28:0,87,1221	0/0:17,0:17:51.17:0,51,734	0/0:22,0:22:66.22:0,66,950	0/0:27,0:27:81.27:0,81,1166	0/0:22,0:22:66.20:0,66,916	0/0:35,0:35:99:0,99,1409	0/0:25,0:25:72.24:0,72,1037	1/1:0,25:25:66.21:818,66,0	1/1:0,25:25:69.22:855,69,0	0/0:11,0:11:33.11:0,33,475	0/0:9,0:9:27.09:0,27,389	0/0:25,0:25:75.24:0,75,1063	0/0:29,0:29:87.27:0,87,1204	0/0:27,0:27:81.26:0,81,1148	0/0:20,0:20:60.19:0,60,845	0/0:22,0:22:63.21:0,63,907	0/0:21,0:21:57.14:0,57,764	0/0:32,0:32:93.30:0,93,1323	0/0:24,0:24:72.23:0,72,1020	0/0:19,0:19:57.19:0,57,809	0/0:6,0:6:18.05:0,18,241
chr10	23763801	.	A	ATTG	21387.31	PASS	AC=36;AF=0.667;AN=54;BaseQRankSum=9.209;DP=595;FS=19.518;HRun=0;HaplotypeScore=115.0750;InbreedingCoeff=0.9950;MQ=76.26;MQ0=0;MQRankSum=-15.646;QD=53.60;ReadPosRankSum=-1.801;VQSLOD=4.6737;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,14:19:45.15:974,45,0	1/1:0,4:4:12.04:264,12,0	0/0:20,0:20:48.10:0,48,654	0/0:27,0:27:60.07:0,60,928	1/1:6,19:26:66.23:1413,66,0	1/1:5,24:28:81.28:1739,81,0	1/1:10,8:18:36.08:682,36,0	1/1:8,32:40:99:2239,108,0	1/1:3,12:15:45.14:943,45,0	0/0:24,0:24:69.23:0,69,1088	0/0:30,0:30:81.25:0,81,1276	1/1:6,15:21:51.16:1079,51,0	1/1:6,17:23:69.15:1369,69,0	1/1:6,17:23:63.15:1319,63,0	1/1:8,21:29:78.04:1526,78,0	1/1:5,24:29:84.29:1846,84,0	0/0:14,0:14:36.10:0,36,553	0/0:16,0:16:39.13:0,39,626	0/0:22,0:22:60.20:0,60,964	0/0:27,0:27:75.26:0,75,1203	0/0:15,0:15:39.13:0,39,626	1/1:6,17:23:57.06:1142,57,0	1/1:2,13:16:39.13:853,39,0	1/1:8,10:18:35.53:645,36,0	1/1:7,13:19:42.13:881,42,0	1/1:5,22:27:78.21:1619,78,0	1/1:7,11:18:44.87:854,45,0	./.
chr10	23763816	.	GA	G	10079.79	PASS	AC=36;AF=0.667;AN=54;BaseQRankSum=16.213;DP=550;FS=32.648;HRun=5;HaplotypeScore=122.1409;InbreedingCoeff=0.9708;MQ=68.96;MQ0=0;MQRankSum=-14.969;QD=27.69;ReadPosRankSum=1.923;VQSLOD=2.6260;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,19:21:48.14:538,48,0	1/1:1,1:2:3.01:34,3,0	0/0:18,0:18:48.15:0,48,611	0/0:22,0:22:51.06:0,51,651	1/1:2,27:29:66.04:699,66,0	1/1:1,31:32:90.26:1015,90,0	1/1:0,12:12:30.08:338,30,0	1/1:3,33:36:96.17:1041,96,0	1/1:0,17:17:51.15:575,51,0	0/0:26,0:26:67.76:0,68,872	0/0:32,0:32:93.21:0,93,1226	1/1:0,20:20:48.14:541,48,0	1/1:1,19:20:51.14:574,51,0	1/1:4,15:19:42.12:472,42,0	1/1:1,28:29:81.23:913,81,0	1/1:4,24:28:69.20:777,69,0	0/0:12,0:12:36.12:0,36,489	0/0:15,0:15:39.13:0,39,526	0/0:21,0:21:57.15:0,57,719	0/0:26,0:26:78.23:0,78,1015	0/0:14,0:14:39.13:0,39,530	1/1:2,16:18:48.14:539,48,0	1/1:2,11:13:33.09:370,33,0	1/1:6,11:17:17.64:200,18,0	1/1:3,14:16:30.09:338,30,0	1/1:1,19:20:57.16:643,57,0	1/1:0,14:14:42.12:474,42,0	./.
chr10	23764096	.	G	GTATTAAAAGT	31613.60	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-13.138;DP=507;FS=23.165;HRun=0;HaplotypeScore=111.0019;InbreedingCoeff=0.9697;MQ=76.91;MQ0=0;MQRankSum=-15.167;QD=94.37;ReadPosRankSum=1.896;VQSLOD=2.8629;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,6:13:18.06:829,18,0	1/1:1,0:3:9.03:214,9,0	0/0:21,0:21:57.16:0,57,1607	0/0:12,0:12:33.08:0,33,777	1/1:2,10:21:30.10:1387,30,0	1/1:0,17:26:51.18:2694,51,0	1/1:1,8:15:27.09:1425,27,0	1/1:2,7:33:93.30:4130,93,0	1/1:0,15:21:45.15:2377,45,0	0/0:28,0:28:81.28:0,81,2386	0/0:29,0:29:81.28:0,81,2453	1/1:1,15:26:45.15:2377,45,0	1/1:1,12:19:36.12:1901,36,0	1/1:1,10:17:33.11:1738,33,0	1/1:1,9:17:27.09:1426,27,0	1/1:1,11:18:36.12:1885,36,0	0/0:20,0:20:57.20:0,57,1825	0/0:9,0:9:19.67:0,20,491	0/0:10,0:10:30.10:0,30,843	0/0:31,0:31:90.29:0,90,2710	0/0:12,0:12:36.10:0,36,1024	1/1:1,3:7:9.03:475,9,0	1/1:2,9:18:29.93:1439,30,0	1/1:0,5:6:9.39:351,9,0	1/1:0,12:18:33.11:1743,33,0	1/1:1,13:23:63.21:2840,63,0	1/1:0,10:21:27.09:1427,27,0	1/1:1,8:12:19.62:955,20,0
chr10	23764749	.	A	ATT	4556.37	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-12.086;DP=545;FS=10.328;HRun=10;HaplotypeScore=61.6272;InbreedingCoeff=0.9705;MQ=78.19;MQ0=4;MQRankSum=-1.958;QD=27.78;ReadPosRankSum=0.869;VQSLOD=3.8886;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,20:23:45.15:671,45,0	0/0:15,0:15:33.01:0,33,336	0/0:16,0:16:17.98:0,18,172	0/0:8,0:8:8.70:0,9,61	0/0:25,0:28:65.37:0,65,678	0/0:26,0:26:69.15:0,69,702	0/0:3,0:4:11.77:0,12,103	0/0:27,0:29:47.49:0,47,509	0/0:18,0:18:48.10:0,48,488	0/0:28,0:28:66.06:0,66,665	0/0:21,0:22:50.80:0,51,493	0/0:18,0:19:44.81:0,45,433	0/0:28,0:28:57.05:0,57,580	0/0:15,0:16:38.82:0,39,378	1/1:3,22:24:51.17:761,51,0	1/1:4,19:24:17.64:636,18,0	0/0:14,0:14:39.08:0,39,397	0/0:5,0:5:15.03:0,15,153	0/0:7,0:8:20.78:0,21,195	0/0:27,0:27:75.14:0,75,763	0/0:8,0:8:18.02:0,18,183	0/0:13,0:13:27:0,27,275	0/0:18,0:18:48.07:0,48,474	0/0:11,0:11:30.07:0,30,305	0/0:20,0:20:51.08:0,51,519	1/1:2,16:18:20.60:638,21,0	1/1:4,41:50:99:1403,101,0	1/1:10,13:21:30.10:447,30,0
chr10	23765114	.	C	CGTG	442.11	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.837;DP=283;FS=13.840;HRun=0;HaplotypeScore=55.0152;InbreedingCoeff=0.7460;MQ=95.49;MQ0=2;MQRankSum=-1.725;QD=40.19;ReadPosRankSum=0.049;VQSLOD=3.1007;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,10:11:24.08:535,24,0	0/0:3,0:3:9.03:0,9,147	0/0:23,0:18:34.71:0,35,585	0/0:24,0:22:10.30:0,10,600	0/0:8,0:8:24.08:0,24,392	0/0:6,0:6:18.06:0,18,289	0/0:10,0:10:21.07:0,21,343	0/0:8,0:8:24.08:0,24,388	0/0:7,0:7:21.07:0,21,342	0/0:13,0:13:39.13:0,39,633	0/0:6,0:6:18.06:0,18,294	0/0:9,0:9:27.09:0,27,441	0/0:8,0:8:24.08:0,24,391	0/0:12,0:12:33.11:0,33,538	0/0:13,0:13:36.12:0,36,587	0/0:16,0:16:39.13:0,39,636	0/0:4,0:4:12.04:0,12,196	0/0:3,0:3:6.02:0,6,98	0/0:16,0:16:39.13:0,39,636	0/0:10,0:10:27.09:0,27,441	0/0:13,0:13:27.08:0,27,417	0/0:5,0:5:12.04:0,12,196	0/0:5,0:5:15.05:0,15,244	0/0:9,0:9:24.08:0,24,392	0/0:10,0:10:30.10:0,30,484	0/0:10,0:10:27.09:0,27,441	0/0:11,0:11:33.10:0,33,513	0/0:6,0:6:18.06:0,18,294
chr10	23767681	.	A	AT	10027.74	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=13.671;DP=641;FS=1.429;HRun=9;HaplotypeScore=85.0215;InbreedingCoeff=0.9837;MQ=68.92;MQ0=0;MQRankSum=-0.554;QD=25.58;ReadPosRankSum=0.211;VQSLOD=5.1471;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,31:38:78.21:863,78,0	1/1:2,18:20:42.11:462,42,0	0/0:13,0:12:20.92:0,21,174	0/0:6,0:6:5.99:0,6,52	1/1:1,19:21:50.97:541,51,0	1/1:1,16:17:42.11:465,42,0	1/1:8,18:26:59.41:653,59,0	1/1:9,26:35:75.20:829,75,0	1/1:3,20:23:48.12:531,48,0	0/0:27,0:27:65.96:0,66,570	0/0:17,0:17:41.99:0,42,365	1/1:4,24:28:39.67:640,40,0	1/1:3,36:39:99:1160,105,0	1/1:4,24:28:69.18:754,69,0	1/1:6,19:25:31.32:572,31,0	1/1:1,22:23:66.18:730,66,0	0/0:17,0:17:44.99:0,45,391	0/0:21,0:21:56.98:0,57,495	0/0:20,0:20:47.17:0,47,390	0/0:22,0:22:62.98:0,63,547	0/0:22,0:22:53.82:0,54,464	1/1:3,7:10:19.60:203,20,0	1/1:2,25:27:69.19:763,69,0	1/1:1,19:20:51.14:564,51,0	1/1:1,11:12:27.07:299,27,0	0/0:32,0:32:80.97:0,81,700	0/0:36,0:36:98.97:0,99,859	0/0:16,0:16:41.99:0,42,364
chr10	23768517	.	CT	C	5506.56	PASS	AB=0.889;AC=37;AF=0.661;AN=56;BaseQRankSum=5.988;DP=569;FS=3.513;HRun=13;HaplotypeScore=64.6255;InbreedingCoeff=0.8708;MQ=67.68;MQ0=0;MQRankSum=1.171;QD=13.43;ReadPosRankSum=3.538;VQSLOD=5.4428;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:20,3:24:5.55:6,0,388	1/1:0,8:8:17.87:131,18,0	0/0:11,0:9:3.38:0,3,12	0/0:6,0:5:5.47:0,5,37	1/1:9,20:31:59.46:411,59,0	1/1:2,17:20:20.59:305,21,0	1/1:5,17:23:46.37:322,46,0	1/1:8,20:32:59.62:406,60,0	1/1:3,15:19:34.84:247,35,0	0/0:21,0:22:32.87:0,33,297	0/0:22,0:23:45.78:0,46,416	1/1:5,17:24:25.23:295,25,0	1/1:8,14:23:46.72:334,47,0	1/1:5,16:21:15.51:277,16,0	1/1:3,19:23:11.38:368,11,0	1/1:5,12:20:44.85:302,45,0	0/0:22,0:23:44.86:0,45,406	0/0:13,0:15:32.87:0,33,299	0/0:16,1:19:23.03:0,23,368	0/0:20,1:22:19.29:0,19,363	0/0:14,2:17:13.28:0,13,307	1/1:5,6:11:20.83:153,21,0	1/1:5,21:29:37.77:386,38,0	1/1:5,13:18:38.71:284,39,0	1/1:7,14:21:41.67:307,42,0	1/1:4,18:23:32.46:386,32,0	1/1:7,25:35:74.67:521,75,0	1/1:1,4:5:8.92:66,9,0
chr10	23769466	.	CA	C	10900.93	PASS	AB=0.786;AC=39;AF=0.696;AN=56;BaseQRankSum=13.378;DP=590;FS=2.571;HRun=8;HaplotypeScore=78.4689;InbreedingCoeff=0.9177;MQ=72.52;MQ0=0;MQRankSum=-3.879;QD=24.77;ReadPosRankSum=2.469;VQSLOD=5.7204;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,16:18:42.06:406,42,0	1/1:1,14:15:42.07:406,42,0	0/0:7,0:7:10.82:0,11,92	0/1:7,2:11:9.29:9,0,127	1/1:1,30:31:90.14:869,90,0	1/1:1,26:27:78.12:753,78,0	1/1:3,11:14:33.05:319,33,0	1/1:2,23:25:66.09:637,66,0	1/1:4,19:23:54.08:521,54,0	0/0:23,0:23:66.17:0,66,782	0/0:22,0:22:57.17:0,57,689	1/1:1,21:22:63.10:608,63,0	1/1:2,31:33:90.14:869,90,0	1/1:1,20:21:57.09:550,57,0	1/1:1,23:24:69.11:666,69,0	1/1:2,16:18:42.07:406,42,0	0/0:20,0:19:57.13:0,57,662	0/0:13,0:13:39.12:0,39,471	0/0:21,0:21:60.17:0,60,712	0/0:31,0:31:90.26:0,90,1067	0/0:13,0:13:36.09:0,36,422	1/1:5,17:22:48.07:464,48,0	1/1:3,25:28:68.81:666,69,0	1/1:1,22:23:63.10:608,63,0	1/1:0,19:19:57.09:551,57,0	1/1:2,24:26:72.12:695,72,0	1/1:5,25:30:69.08:666,69,0	1/1:2,8:10:24.04:232,24,0
chr10	23771123	.	T	TAC	3738.10	PASS	AB=0.919;AC=29;AF=0.518;AN=56;BaseQRankSum=11.567;DP=757;FS=1.963;HRun=0;HaplotypeScore=249.5299;InbreedingCoeff=0.5540;MQ=54.81;MQ0=12;MQRankSum=-7.899;QD=8.61;ReadPosRankSum=-1.221;VQSLOD=3.2056;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:58:17.90:0,18,241	1/1:3,4:7:9.03:136,9,0	0/0:51,0:11:24.05:0,24,277	0/0:48,0:20:14.52:0,15,163	1/1:13,10:24:6.02:87,6,0	1/1:12,12:24:17.42:227,17,0	1/1:16,11:27:21.03:269,21,0	0/1:28,7:33:13.79:681,0,14	1/1:3,11:13:18.95:268,19,0	0/0:27,0:28:75.06:0,75,900	0/0:20,0:20:54.17:0,54,675	1/1:8,10:18:15.05:230,15,0	1/1:9,23:32:56.96:784,57,0	1/1:13,19:33:27.07:365,27,0	0/1:19,0:19:11.23:11,0,95	0/1:27,0:27:1.06:1,0,127	0/0:24,0:25:63:0,63,748	0/0:13,0:13:28.74:0,29,373	0/0:29,0:29:54.17:0,54,674	0/0:26,0:26:57.06:0,57,678	0/0:25,0:25:65.88:0,66,799	0/1:5,10:15:0.11:0,0,0	1/1:9,14:23:8.59:133,9,0	1/1:16,12:28:6.02:89,6,0	1/1:11,20:31:18.06:283,18,0	0/1:28,0:28:58.22:58,0,169	0/1:39,0:38:99:113,0,126	0/1:10,0:10:3.24:3,0,81
chr10	23771136	.	ATG	A	2152.13	PASS	AB=0.924;AC=24;AF=0.429;AN=56;BaseQRankSum=4.015;DP=746;FS=17.732;HRun=0;HaplotypeScore=256.3295;InbreedingCoeff=0.1142;MQ=44.24;MQ0=14;MQRankSum=-4.373;QD=4.65;ReadPosRankSum=-2.463;VQSLOD=1.1678;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:56,0:56:33.26:33,0,108	1/1:5,1:6:11.11:102,11,0	0/0:56,0:12:29.95:0,30,474	0/0:40,0:11:14.75:0,15,279	0/1:23,1:24:5.95:235,0,6	0/1:20,1:21:6.48:86,0,6	0/1:18,7:25:3.40:106,0,3	1/1:29,5:31:35.77:579,36,0	1/1:16,0:15:8.29:137,8,0	0/0:29,0:29:86.88:0,87,1602	0/0:21,0:21:63.22:0,63,1238	1/1:13,4:17:6.39:74,6,0	1/1:28,3:31:35.12:322,35,0	1/1:27,1:29:1.15:33,1,0	0/1:20,1:21:15.37:15,0,70	0/1:30,0:30:46.98:140,0,47	0/0:27,0:27:78:0,78,1425	0/0:13,1:14:3.62:0,4,703	0/0:25,0:25:69.24:0,69,1290	0/0:22,0:22:66.23:0,66,1318	0/0:23,0:23:34.39:0,34,1226	0/1:17,2:19:7.52:60,0,8	0/1:19,4:23:25.19:137,0,25	0/1:19,3:22:18.41:33,0,18	0/1:32,2:34:11.63:135,0,12	0/0:25,0:25:51.47:0,51,301	0/1:40,1:40:31.87:32,0,217	0/1:12,2:14:42.84:73,0,43
chr10	23771137	.	T	TAC	8775.85	PASS	AB=0.824;AC=37;AF=0.661;AN=56;BaseQRankSum=13.557;DP=751;FS=5.971;HRun=0;HaplotypeScore=236.7266;InbreedingCoeff=0.8757;MQ=45.21;MQ0=14;MQRankSum=-1.835;QD=17.95;ReadPosRankSum=2.223;VQSLOD=4.1592;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:23,34:57:35.68:945,36,0	1/1:3,3:6:7.69:110,8,0	0/0:56,0:12:26.95:0,27,359	0/0:41,0:12:20.81:0,21,267	1/1:10,14:24:17.85:165,18,0	1/1:5,16:21:14.35:209,14,0	1/1:15,10:25:5.38:94,5,0	1/1:24,9:30:58.61:774,59,0	1/1:5,11:15:19.53:267,20,0	0/0:29,0:29:87.29:0,87,1387	0/0:21,0:21:63.21:0,63,1010	1/1:7,10:17:17.09:235,17,0	1/1:8,23:31:56.27:828,56,0	1/1:5,23:29:24.08:354,24,0	1/1:7,14:21:36.12:590,36,0	1/1:10,20:30:53.60:802,54,0	0/0:28,0:28:77.85:0,78,1170	0/0:14,0:14:38.36:0,38,603	0/0:25,0:25:69.18:0,69,992	0/0:22,0:22:66.23:0,66,1066	0/0:24,0:24:69.19:0,69,1079	1/1:7,12:19:8.91:125,9,0	1/1:9,14:23:13.34:194,13,0	1/1:8,14:22:5.72:62,6,0	1/1:9,25:34:21.92:321,22,0	1/1:8,18:26:13.80:915,14,0	1/1:15,26:40:80.69:1477,81,0	0/1:11,3:14:3.67:307,0,4
chr10	23771184	.	CAA	C	12521.48	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=14.224;DP=684;FS=5.458;HRun=10;HaplotypeScore=169.4448;InbreedingCoeff=0.9977;MQ=71.33;MQ0=2;MQRankSum=-6.259;QD=27.22;ReadPosRankSum=1.157;VQSLOD=3.2610;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,33:41:99:1094,99,0	1/1:0,6:6:18.05:201,18,0	0/0:18,0:18:35.78:0,36,474	0/0:20,0:20:35.04:0,35,498	1/1:1,31:32:87.23:970,87,0	1/1:3,24:27:72.19:803,72,0	1/1:4,12:16:36.08:399,36,0	1/1:4,28:32:84.20:935,84,0	1/1:0,17:17:45.12:502,45,0	0/0:28,0:29:81.27:0,81,1266	0/0:22,0:22:54.18:0,54,857	1/1:2,19:21:54.14:602,54,0	1/1:5,21:26:63.15:702,63,0	1/1:6,21:27:54.13:602,54,0	1/1:3,17:20:51.13:566,51,0	1/1:6,21:26:57.13:635,57,0	0/0:20,0:20:57.19:0,57,905	0/0:24,0:23:56.77:0,57,830	0/0:37,0:37:99:0,102,1563	0/0:36,0:37:98.80:0,99,1468	0/0:17,0:17:39.13:0,39,618	1/1:5,11:16:33.07:368,33,0	1/1:3,19:22:51.12:568,51,0	1/1:2,23:25:69.18:769,69,0	1/1:4,30:34:81.20:903,81,0	1/1:3,24:27:30.54:768,31,0	1/1:5,29:34:81.18:903,81,0	1/1:1,9:10:19.85:232,20,0
chr10	23771764	.	GT	G	5934.94	PASS	AB=0.542;AC=37;AF=0.661;AN=56;BaseQRankSum=10.867;DP=568;FS=3.206;HRun=11;HaplotypeScore=73.3989;InbreedingCoeff=0.8585;MQ=72.97;MQ0=0;MQRankSum=0.893;QD=15.34;ReadPosRankSum=2.223;VQSLOD=5.7283;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,0:15:28.52:82,29,0	1/1:0,12:12:32.92:265,33,0	0/0:12,0:11:16.64:0,17,149	0/0:16,0:17:19.48:0,19,186	1/1:3,35:38:97.69:811,98,0	1/1:2,19:22:52.97:425,53,0	1/1:3,18:21:17.81:296,18,0	1/1:8,22:30:65.84:533,66,0	1/1:1,12:14:38:301,38,0	0/0:13,1:14:2.41:0,2,222	0/0:27,1:28:50.51:0,51,722	1/1:1,14:15:35.96:296,36,0	1/1:1,25:26:59.77:492,60,0	1/1:3,17:20:50.94:419,51,0	1/1:19,0:19:17.92:109,18,0	1/1:16,0:16:35.49:131,35,0	0/0:23,0:23:54.12:0,54,568	0/0:15,0:15:38.93:0,39,375	0/0:23,0:23:63.09:0,63,640	0/0:38,2:40:61.61:0,62,885	0/0:7,0:9:23.73:0,24,220	1/1:4,20:25:53.90:443,54,0	1/1:4,25:29:65.86:536,66,0	0/1:2,11:13:21.06:207,0,21	1/1:6,20:26:21.61:374,22,0	1/1:2,0:20:7.68:76,8,0	1/1:2,0:23:40.73:120,41,0	1/1:0,0:3:6.11:18,6,0
chr10	23771775	.	TA	T	914.99	PASS	AB=0.958;AC=5;AF=0.089;AN=56;BaseQRankSum=-0.691;DP=571;FS=21.809;HRun=4;HaplotypeScore=93.5617;InbreedingCoeff=0.5581;MQ=74.41;MQ0=0;MQRankSum=-2.895;QD=16.05;ReadPosRankSum=2.736;VQSLOD=2.3587;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:46.60:0,47,288	0/0:13,0:13:7.97:0,8,39	0/0:15,1:15:36.01:0,36,275	0/0:15,0:15:29.84:0,30,215	0/0:39,0:39:9.38:0,9,96	0/0:21,0:21:9.30:0,9,55	0/0:21,0:21:18.07:0,18,115	0/0:27,0:27:37.57:0,38,182	0/0:15,0:15:8.19:0,8,74	0/0:11,0:11:28.60:0,29,305	0/0:33,0:33:90.20:0,90,1049	0/0:17,0:17:10.74:0,11,86	0/0:26,0:26:0.96:0,1,29	0/0:19,0:19:5.74:0,6,59	1/1:1,17:18:42.13:500,42,0	1/1:0,16:16:45.13:525,45,0	0/0:26,0:26:75.14:0,75,862	0/0:16,0:16:38.90:0,39,461	0/0:22,0:22:57.18:0,57,729	0/0:32,0:32:81.25:0,81,1037	0/0:9,0:9:24.04:0,24,280	0/0:23,0:23:10.82:0,11,96	0/0:30,0:30:27.20:0,27,168	0/0:15,0:15:12.48:0,12,99	0/1:22,1:23:18.15:18,0,72	0/0:22,0:22:61.48:0,61,436	0/0:25,0:25:69.94:0,70,452	0/0:4,0:4:5.74:0,6,32
chr10	23772172	.	AT	A	16787.77	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=17.950;DP=715;FS=5.794;HRun=3;HaplotypeScore=134.5974;InbreedingCoeff=0.9909;MQ=83.88;MQ0=0;MQRankSum=-3.976;QD=32.92;ReadPosRankSum=1.641;VQSLOD=3.6510;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,23:23:69.22:854,69,0	1/1:0,3:3:9.03:112,9,0	0/0:23,0:23:53.91:0,54,741	0/0:19,0:19:47.83:0,48,601	1/1:0,40:40:99:1367,111,0	1/1:2,24:26:42.79:757,43,0	1/1:1,22:23:63.20:780,63,0	1/1:2,37:39:99:1346,111,0	1/1:2,17:19:42.13:520,42,0	0/0:39,0:39:99:0,114,1642	0/0:26,0:26:66.21:0,66,932	1/1:3,30:33:75.24:929,75,0	1/1:1,29:30:84.26:1033,84,0	1/1:1,28:29:78.25:966,78,0	1/1:3,30:33:75.23:929,75,0	1/1:0,16:16:48.15:595,48,0	0/0:23,0:23:69.23:0,69,989	0/0:15,0:15:42.12:0,42,581	0/0:18,0:18:51.16:0,51,716	0/0:24,0:24:72.21:0,72,999	0/0:18,0:18:54.16:0,54,757	1/1:0,23:23:57.18:706,57,0	1/1:0,25:25:72.23:890,72,0	1/1:1,20:21:60.19:743,60,0	1/1:1,23:24:60.19:743,60,0	1/1:0,44:44:99:1528,126,0	1/1:0,39:39:99:1322,108,0	1/1:2,18:20:54.17:666,54,0
chr10	23772322	.	G	GACTAACAGCA	9243.52	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-1.606;DP=656;FS=1.575;HRun=0;HaplotypeScore=184.7956;InbreedingCoeff=0.9235;MQ=93.52;MQ0=0;MQRankSum=-11.253;QD=124.91;ReadPosRankSum=-0.550;VQSLOD=5.2971;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:39.13:0,39,1234	0/0:5,0:5:12.04:0,12,381	0/0:34,0:34:87.23:0,87,2110	0/0:26,0:26:57.20:0,57,1617	0/0:26,0:26:69.22:0,69,2106	0/0:23,0:23:66.20:0,66,1958	0/0:14,0:14:42.14:0,42,1298	0/0:37,0:37:99:0,99,2824	0/0:12,0:12:30.10:0,30,954	0/0:24,0:24:66.22:0,66,1903	0/0:18,0:18:51.16:0,51,1468	0/0:25,0:25:69.24:0,69,2174	0/0:28,0:28:81.28:0,81,2529	0/0:25,0:25:69.24:0,69,2174	0/0:33,0:33:78.25:0,78,2287	0/0:23,0:23:63.20:0,63,1917	0/0:25,0:25:66.23:0,66,1994	0/0:21,0:21:51.18:0,51,1533	0/0:23,0:23:63.22:0,63,1800	0/0:32,0:32:81.28:0,81,2559	0/0:34,0:34:96.31:0,96,2914	0/0:19,0:19:48.16:0,48,1437	0/0:21,0:21:57.18:0,57,1721	0/0:18,0:18:48.16:0,48,1516	0/0:19,0:19:51.18:0,51,1575	1/1:20,14:38:99:4527,102,0	1/1:13,20:35:93.32:4656,93,0	1/1:1,0:1:3.01:61,3,0
chr10	23773139	.	G	GT	1217.94	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-6.037;DP=311;FS=11.799;HRun=6;HaplotypeScore=31.6168;InbreedingCoeff=0.8748;MQ=67.16;MQ0=0;MQRankSum=-2.070;QD=31.23;ReadPosRankSum=0.786;VQSLOD=2.8483;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:24.05:0,24,245	0/0:6,0:6:15.03:0,15,153	0/0:8,0:7:15.03:0,15,153	0/0:6,0:6:18.04:0,18,184	0/0:16,0:16:45.10:0,45,459	0/0:20,0:20:48.11:0,48,489	0/0:8,0:8:24.05:0,24,245	0/0:23,0:23:57.10:0,57,562	0/0:3,0:3:9.02:0,9,92	0/0:9,0:9:27.05:0,27,269	0/0:12,0:12:36.05:0,36,358	0/0:10,0:10:27.02:0,27,265	0/0:9,0:9:21.04:0,21,214	0/0:3,0:3:6.01:0,6,61	0/0:7,0:7:21.03:0,21,208	0/0:11,0:11:18:0,18,173	0/0:29,0:29:63.06:0,63,616	0/0:11,0:11:24.01:0,24,234	0/0:19,0:19:54.12:0,54,551	0/0:12,0:12:36.07:0,36,362	0/0:7,0:7:21.03:0,21,207	0/0:2,0:2:6.01:0,6,61	0/0:7,0:7:15.03:0,15,151	0/0:5,0:5:12.02:0,12,117	0/0:19,0:19:51.10:0,51,514	1/1:0,7:7:21.06:252,21,0	1/1:6,14:20:52.52:654,53,0	1/1:0,12:12:36.12:453,36,0
chr10	23773158	.	T	TTTTA	1274.95	PASS	AB=1.000;AC=17;AF=0.370;AN=46;BaseQRankSum=-3.183;DP=256;FS=0.000;HRun=0;HaplotypeScore=41.5474;InbreedingCoeff=0.5899;MQ=61.13;MQ0=4;MQRankSum=-0.025;QD=12.62;ReadPosRankSum=0.510;VQSLOD=1.8574;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:10,0:9:0.54:1,0,86	0/0:6,0:6:6.01:0,6,72	./.	./.	0/0:11,0:10:9.03:0,9,130	0/0:20,0:19:42.14:0,42,636	./.	0/0:26,0:25:27.06:0,27,345	0/0:4,0:4:12.04:0,12,181	1/1:8,0:8:6.02:132,6,0	1/1:13,0:13:3.01:54,3,0	0/0:10,0:8:6.02:0,6,94	0/0:7,0:7:5.99:0,6,69	0/0:2,0:2:3.01:0,3,36	0/0:4,0:4:1.25:0,1,3	1/1:2,1:5:3:29,3,0	1/1:12,18:29:36.12:822,36,0	1/1:4,3:7:6.02:142,6,0	1/1:13,3:15:9.03:213,9,0	1/1:7,0:7:3:27,3,0	1/1:5,0:5:0.47:1,0,0	./.	./.	0/0:3,0:3:3.01:0,3,45	0/0:9,0:9:15.05:0,15,226	0/0:5,0:5:9.03:0,9,141	0/0:15,0:15:17.23:0,17,216	0/0:11,0:11:15.05:0,15,235
chr10	23774298	.	GA	G	9791.59	PASS	AB=0.537;AC=37;AF=0.661;AN=56;BaseQRankSum=13.960;DP=634;FS=1.026;HRun=9;HaplotypeScore=81.2773;InbreedingCoeff=0.9196;MQ=76.61;MQ0=0;MQRankSum=-1.282;QD=23.20;ReadPosRankSum=2.554;VQSLOD=5.6337;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,21:21:63.03:577,63,0	1/1:0,13:13:36.02:330,36,0	0/0:17,0:16:33:0,33,362	0/0:16,0:15:36.81:0,37,428	1/1:4,25:29:75.03:686,75,0	1/1:2,23:25:37.42:597,37,0	1/1:3,12:15:36.01:330,36,0	1/1:4,24:28:72.02:659,72,0	1/1:1,20:21:57.03:522,57,0	0/0:27,0:27:66.18:0,66,748	0/0:29,0:29:75.21:0,75,857	1/1:3,21:24:57.02:521,57,0	1/1:3,21:24:54.03:494,54,0	1/1:4,22:26:63.03:577,63,0	1/1:1,21:22:57.03:522,57,0	1/1:3,16:19:45.02:412,45,0	0/0:28,0:28:78.10:0,78,842	0/0:21,0:21:57.15:0,57,646	0/0:30,0:30:87.26:0,87,1003	0/0:23,1:24:41.74:0,42,734	0/0:20,0:20:60.14:0,60,671	1/1:3,14:17:17.46:332,17,0	1/1:3,24:27:68.83:631,69,0	1/1:0,15:15:42.02:384,42,0	1/1:2,24:26:72.04:659,72,0	0/1:4,25:29:19.81:598,0,20	1/1:1,23:24:63.03:577,63,0	1/1:0,17:17:42.02:384,42,0
chr10	23776795	.	TACAC	T	716.89	PASS	AB=0.811;AC=8;AF=0.160;AN=50;BaseQRankSum=0.795;DP=585;FS=10.618;HRun=0;HaplotypeScore=136.9464;InbreedingCoeff=0.1837;MQ=66.12;MQ0=14;MQRankSum=1.646;QD=5.97;ReadPosRankSum=0.979;VQSLOD=2.0287;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:2.14:0,2,60	./.	./.	./.	0/0:30,0:28:11.42:0,11,211	0/0:27,0:26:3.01:0,3,68	0/0:17,0:16:5.96:0,6,135	0/0:24,0:24:15.05:0,15,279	0/0:19,0:19:8.86:0,9,136	0/0:13,0:18:16.98:0,17,102	0/1:7,0:8:23.45:24,0,23	0/0:20,0:19:3.01:0,3,49	0/0:22,0:22:9.03:0,9,175	0/0:29,0:29:6:0,6,77	1/1:9,11:21:14.61:361,15,0	1/1:8,13:23:26.78:393,27,0	0/0:18,0:28:27.82:0,28,759	0/1:14,0:21:14.63:15,0,39	0/0:15,0:16:8.74:0,9,62	0/1:17,1:24:26.77:27,0,141	0/1:18,4:22:32.61:33,0,62	0/0:13,0:12:3.01:0,3,69	0/0:21,0:20:3.01:0,3,52	0/0:25,0:25:8.36:0,8,174	0/0:13,0:13:6.02:0,6,117	0/0:34,0:34:62.70:0,63,1234	0/0:17,0:17:15.52:0,16,317	0/0:5,0:7:15.05:0,15,299
chr10	23778323	.	TCAGG	T	17655.22	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=21.143;DP=652;FS=5.230;HRun=0;HaplotypeScore=171.0746;InbreedingCoeff=0.9972;MQ=88.03;MQ0=0;MQRankSum=-20.176;QD=57.32;ReadPosRankSum=0.830;VQSLOD=6.1676;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,20:20:60.16:1200,60,0	1/1:0,15:15:45.15:895,45,0	0/0:34,0:34:99:0,99,2483	0/0:27,0:26:77.80:0,78,1893	1/1:0,26:26:69.15:1251,69,0	1/1:0,25:25:72.25:1454,72,0	1/1:0,13:13:39.13:810,39,0	1/1:0,26:26:78.24:1556,78,0	1/1:0,16:16:45.15:883,45,0	0/0:26,0:26:78.26:0,78,2199	0/0:22,0:22:66.23:0,66,1917	1/1:0,30:30:90.31:1841,90,0	1/1:0,23:23:60.20:1206,60,0	1/1:0,30:30:87.30:1775,87,0	0/0:41,0:41:99:0,123,3550	0/0:44,0:44:99:0,132,3656	0/0:7,0:7:21.07:0,21,608	0/0:15,0:15:42.14:0,42,1173	0/0:21,0:21:63.19:0,63,1554	0/0:27,0:27:81.28:0,81,2301	0/0:25,0:25:75.24:0,75,2112	1/1:0,29:29:87.30:1754,87,0	1/1:0,21:21:60.19:1217,60,0	1/1:0,13:13:30.10:586,30,0	1/1:0,21:21:60.20:1227,60,0	0/0:21,0:21:63.20:0,63,1689	0/0:29,0:29:87.30:0,87,2503	0/0:5,0:5:15.05:0,15,435
chr10	23781073	.	AAT	A	5682.56	PASS	AC=26;AF=0.481;AN=54;BaseQRankSum=0.561;DP=392;FS=5.182;HRun=0;HaplotypeScore=60.6845;InbreedingCoeff=0.9277;MQ=79.46;MQ0=3;MQRankSum=1.441;QD=31.75;ReadPosRankSum=-1.010;VQSLOD=6.3263;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,5:5:15.05:195,15,0	1/1:0,4:4:12.04:156,12,0	0/0:12,0:5:6.02:0,6,94	0/0:25,0:18:4.01:0,4,100	1/1:2,25:26:66.13:820,66,0	1/1:7,13:20:36.12:468,36,0	1/1:1,7:8:21.07:273,21,0	1/1:7,41:47:99:1584,123,0	1/1:0,8:8:18.06:234,18,0	0/0:21,0:21:48.16:0,48,816	0/0:14,0:14:36.12:0,36,612	1/1:2,6:8:18.06:234,18,0	1/1:0,13:13:39.13:507,39,0	1/1:2,10:12:30.10:390,30,0	0/0:2,0:10:21.01:0,21,188	0/0:2,0:7:15.01:0,15,134	0/0:11,0:11:30.10:0,30,508	0/0:12,0:12:33.11:0,33,561	0/0:17,0:17:45.15:0,45,765	0/0:23,0:23:66.23:0,66,1116	0/0:2,0:2:6.02:0,6,102	./.	1/1:1,11:12:33.11:429,33,0	1/1:0,3:3:9.03:117,9,0	1/1:1,10:10:21.07:273,21,0	0/0:2,0:21:57.03:0,57,510	0/0:8,0:28:69.01:0,69,622	0/0:0,0:10:27.01:0,27,241
chr10	23781451	.	AT	A	8220.65	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=14.587;DP=542;FS=16.149;HRun=2;HaplotypeScore=68.7637;InbreedingCoeff=0.9970;MQ=77.08;MQ0=0;MQRankSum=-0.882;QD=34.40;ReadPosRankSum=0.393;VQSLOD=3.2118;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,15:15:39.13:505,39,0	1/1:0,10:10:27.09:350,27,0	0/0:17,0:17:49.35:0,49,695	0/0:9,0:9:17.96:0,18,180	1/1:0,14:14:42.10:527,42,0	1/1:0,25:25:75.24:971,75,0	1/1:0,7:7:21.07:272,21,0	1/1:0,35:35:99:1251,102,0	1/1:0,15:15:39.13:503,39,0	0/0:27,0:27:81.25:0,81,1160	0/0:28,0:28:81.26:0,81,1185	1/1:0,17:17:42.14:544,42,0	1/1:0,21:21:47.91:618,48,0	1/1:1,22:23:54.11:679,54,0	0/0:22,0:22:60.19:0,60,874	0/0:24,0:24:66.22:0,66,971	0/0:27,0:27:75.16:0,75,1070	0/0:15,0:15:42.06:0,42,601	0/0:17,0:17:51.15:0,51,726	0/0:35,0:35:99:0,102,1448	0/0:23,0:23:69.17:0,69,1006	1/1:0,14:14:42.14:544,42,0	1/1:0,13:13:33.05:406,33,0	1/1:0,13:13:33.11:428,33,0	1/1:0,17:17:48.16:622,48,0	0/0:22,0:22:60.14:0,60,855	0/0:30,0:30:90.26:0,90,1301	0/0:7,0:7:18.06:0,18,266
chr10	23781571	.	TTATG	T	11854.54	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=16.580;DP=637;FS=10.647;HRun=0;HaplotypeScore=120.9556;InbreedingCoeff=0.9980;MQ=78.38;MQ0=0;MQRankSum=-7.040;QD=37.63;ReadPosRankSum=2.935;VQSLOD=4.8663;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,27:32:75.26:1287,75,0	1/1:0,6:6:18.06:309,18,0	0/0:25,0:25:48.16:0,48,1050	0/0:26,0:26:60.13:0,60,1384	1/1:4,25:29:57.11:915,57,0	1/1:7,32:39:99:1699,99,0	1/1:1,12:13:30.10:515,30,0	1/1:13,15:28:48.11:756,48,0	1/1:2,14:16:36.12:618,36,0	0/0:26,0:26:69.24:0,69,1725	0/0:27,0:27:63.20:0,63,1508	1/1:0,20:20:54.18:927,54,0	1/1:8,24:34:78.27:1327,78,0	1/1:5,20:25:54.18:927,54,0	0/0:25,0:25:60.21:0,60,1483	0/0:27,0:27:69.24:0,69,1701	0/0:21,0:21:48.16:0,48,1207	0/0:27,0:26:69.20:0,69,1681	0/0:9,0:9:21.07:0,21,500	0/0:16,0:16:42.14:0,42,1057	0/0:26,0:26:63.19:0,63,1524	1/1:6,13:19:33.11:567,33,0	1/1:1,13:14:33.11:567,33,0	1/1:2,18:19:36.12:618,36,0	1/1:1,19:20:48.16:824,48,0	0/0:23,0:23:60.21:0,60,1511	0/0:34,0:34:90.31:0,90,2207	0/0:10,0:10:27.09:0,27,678
chr10	23781634	.	TTGTGTG	T	1465.08	PASS	AB=0.911;AC=18;AF=0.391;AN=46;BaseQRankSum=0.874;DP=617;FS=5.038;HRun=0;HaplotypeScore=203.9563;InbreedingCoeff=0.2389;MQ=68.03;MQ0=9;MQRankSum=-1.349;QD=5.27;ReadPosRankSum=-0.444;VQSLOD=2.1133;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:7,0:7:3.01:0,3,44	./.	./.	0/1:19,0:18:16.22:16,0,114	0/0:30,0:30:9.50:0,10,150	0/0:18,0:18:3.44:0,3,112	0/0:38,0:38:14.13:0,14,142	0/1:23,0:23:1.99:2,0,135	1/1:23,6:27:18.01:276,18,0	1/1:11,7:20:14.66:222,15,0	0/1:20,0:20:4.01:4,0,150	0/0:25,0:25:23.50:0,23,340	0/0:21,0:21:18.05:0,18,318	0/1:21,1:25:5.43:97,0,5	0/1:15,3:23:23.73:172,0,24	0/1:17,1:17:63.93:75,0,64	1/1:14,2:16:3.01:61,3,0	0/0:17,0:16:0.47:0,0,1	1/1:13,2:16:9.50:164,10,0	./.	0/1:18,0:18:2.01:2,0,382	0/0:16,0:16:6.02:0,6,82	0/0:20,0:19:12.02:0,12,198	0/0:25,0:24:30.05:0,30,495	0/1:15,0:22:8.73:191,0,9	1/1:16,0:28:23.83:334,24,0	./.
chr10	23781678	.	G	GTATTTTC	7554.34	PASS	AB=0.969;AC=26;AF=0.464;AN=56;BaseQRankSum=5.565;DP=487;FS=7.944;HRun=0;HaplotypeScore=138.6606;InbreedingCoeff=0.8147;MQ=58.51;MQ0=16;MQRankSum=-9.133;QD=36.32;ReadPosRankSum=-5.332;VQSLOD=2.6332;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:18,0:17:57.45:94,0,57	1/1:1,7:8:9.03:236,9,0	0/0:26,0:18:51.14:0,51,1219	0/0:38,0:20:54.15:0,54,1291	1/1:2,6:10:20.96:391,21,0	1/1:22,2:24:25.44:728,25,0	1/1:16,0:15:16.40:657,16,0	1/1:9,0:9:9.12:659,9,0	1/1:7,5:14:21.07:544,21,0	0/0:17,0:17:45.13:0,45,1000	0/0:16,0:16:29.04:0,29,569	1/1:9,1:10:30.10:627,30,0	1/1:6,20:27:29.61:993,30,0	1/1:11,0:11:21.16:457,21,0	0/0:29,0:26:60.14:0,60,1409	0/0:15,0:15:36.12:0,36,773	0/0:22,0:22:39.08:0,39,868	0/0:11,0:11:21.07:0,21,528	0/0:6,0:6:15.49:0,15,332	0/0:17,0:17:45.12:0,45,981	0/0:30,0:30:69.24:0,69,1776	1/1:1,15:16:24.08:822,24,0	1/1:1,9:13:6.02:187,6,0	0/1:14,1:14:4.50:265,0,5	1/1:14,3:17:41.44:892,41,0	0/0:24,0:23:69.22:0,69,1550	0/0:23,0:21:54.02:0,54,1238	0/0:5,0:5:3.01:0,3,80
chr10	23781680	.	G	GTATTTTCTT	9224.49	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=5.069;DP=492;FS=8.497;HRun=0;HaplotypeScore=152.9579;InbreedingCoeff=0.9385;MQ=60.39;MQ0=16;MQRankSum=-10.450;QD=44.56;ReadPosRankSum=-6.848;VQSLOD=2.2600;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:11,8:20:11.96:220,12,0	1/1:7,0:7:6.02:198,6,0	0/0:27,0:19:54.17:0,54,1498	0/0:39,0:21:60.16:0,60,1581	1/1:7,0:7:9.03:209,9,0	1/1:5,12:20:18.06:585,18,0	1/1:14,1:14:33.72:808,34,0	1/1:14,0:14:39.13:1429,39,0	1/1:9,0:9:12.04:362,12,0	0/0:17,0:17:45.15:0,45,1249	0/0:17,0:17:29.39:0,29,678	1/1:13,1:14:36.12:946,36,0	1/1:25,0:25:33.11:1029,33,0	1/1:10,2:12:36.09:878,36,0	0/0:27,0:24:60.21:0,60,1713	0/0:17,0:17:45.10:0,45,979	0/0:22,0:22:35.31:0,35,1036	0/0:11,0:11:21.07:0,21,629	0/0:6,0:6:15.52:0,16,415	0/0:17,0:17:51.07:0,51,1267	0/0:30,0:30:69.24:0,69,2112	1/1:17,0:17:30.10:989,30,0	1/1:14,0:14:15.01:289,15,0	1/1:14,1:15:18.85:311,19,0	1/1:17,0:17:38.81:971,39,0	0/0:25,0:24:69.24:0,69,1938	0/0:25,0:23:56.84:0,57,1538	0/0:5,0:5:3.01:0,3,94
chr10	23782233	.	GT	G	3040.59	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=11.627;DP=298;FS=0.000;HRun=7;HaplotypeScore=40.2605;InbreedingCoeff=0.9361;MQ=63.05;MQ0=4;MQRankSum=-1.084;QD=21.56;ReadPosRankSum=-0.889;VQSLOD=2.3033;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,12:15:33.07:337,33,0	1/1:1,4:5:12.03:122,12,0	0/0:8,0:3:6.02:0,6,70	0/0:7,0:6:9.03:0,9,110	1/1:2,18:20:42.08:428,42,0	1/1:1,11:12:33.08:337,33,0	1/1:0,7:7:15.03:153,15,0	1/1:2,22:23:66.14:667,66,0	1/1:1,6:7:12.03:122,12,0	0/0:12,0:12:30.10:0,30,377	0/0:16,0:16:42.12:0,42,515	1/1:1,9:10:21.04:214,21,0	1/1:2,9:11:21.04:213,21,0	1/1:1,4:5:9.02:92,9,0	0/0:9,0:9:27.09:0,27,340	0/0:10,0:10:24.07:0,24,289	0/0:15,0:15:45.14:0,45,565	0/0:14,0:14:38.79:0,39,464	0/0:10,0:10:21.06:0,21,251	0/0:9,0:9:21.07:0,21,264	0/0:6,0:6:12.04:0,12,148	1/1:1,4:5:9.02:92,9,0	1/1:1,7:8:15.03:153,15,0	1/1:0,7:7:18.04:184,18,0	1/1:0,5:5:15.03:153,15,0	0/0:16,1:17:14.57:0,15,497	0/0:16,0:16:42.13:0,42,528	0/0:8,0:8:24.08:0,24,302
chr10	23782449	.	A	ATATT	632.10	PASS	AC=12;AF=0.429;AN=28;BaseQRankSum=-1.093;DP=1255;FS=6.307;HRun=0;HaplotypeScore=16.8328;InbreedingCoeff=0.6207;MQ=6.74;MQ0=1170;MQRankSum=1.269;QD=3.40;ReadPosRankSum=-0.339;VQSLOD=-0.0377;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	./.	1/1:45,3:4:8.99:180,9,0	1/1:7,1:1:3.01:80,3,0	1/1:15,0:1:3.01:43,3,0	./.	0/0:141,0:2:6.02:0,6,112	./.	./.	1/1:32,7:8:8.87:239,9,0	1/1:21,4:4:6.02:160,6,0	0/0:36,0:10:27.09:0,27,503	0/0:47,0:7:14.98:0,15,241	0/0:37,0:2:3.01:0,3,56	0/0:25,0:1:3.01:0,3,56	0/0:15,0:3:6.02:0,6,112	./.	./.	./.	1/1:48,3:3:3.01:51,3,0	./.	./.	0/0:117,0:4:12.04:0,12,224	0/0:102,0:13:36.05:0,36,616	./.
chr10	23784180	.	C	CA	10434.61	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-13.637;DP=551;FS=2.738;HRun=4;HaplotypeScore=48.2192;InbreedingCoeff=0.9975;MQ=72.99;MQ0=0;MQRankSum=-0.358;QD=36.74;ReadPosRankSum=0.031;VQSLOD=4.8776;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,10:11:24.08:328,24,0	1/1:0,10:10:27.09:369,27,0	0/0:10,0:10:27.04:0,27,282	0/0:10,0:10:16.47:0,16,200	1/1:0,35:35:96.27:1282,96,0	1/1:2,24:26:72.24:985,72,0	1/1:0,10:10:27.09:369,27,0	1/1:4,31:34:93.28:1235,93,0	1/1:0,11:11:33.11:451,33,0	0/0:31,0:31:90.26:0,90,1019	0/0:30,0:30:84.22:0,84,943	1/1:0,15:15:42.14:574,42,0	1/1:0,19:19:45.15:615,45,0	1/1:1,15:16:42.14:574,42,0	0/0:25,0:25:69.20:0,69,782	0/0:18,0:18:48.14:0,48,544	0/0:25,0:25:72.18:0,72,803	0/0:11,0:10:30.04:0,30,318	0/0:15,0:15:45.13:0,45,510	0/0:32,0:32:84.21:0,84,940	0/0:9,0:9:27.08:0,27,306	1/1:1,21:22:60.20:821,60,0	1/1:1,21:22:60.20:821,60,0	1/1:1,19:20:54.18:739,54,0	1/1:1,31:32:93.31:1271,93,0	0/0:14,0:14:39.11:0,39,441	0/0:19,0:19:51.14:0,51,577	0/0:18,0:18:48.13:0,48,544
chr10	23784321	.	T	TACAC	2048.83	PASS	AB=0.881;AC=28;AF=0.519;AN=54;BaseQRankSum=2.816;DP=498;FS=14.002;HRun=0;HaplotypeScore=119.3038;InbreedingCoeff=0.2203;MQ=59.89;MQ0=6;MQRankSum=-0.007;QD=6.63;ReadPosRankSum=-1.113;VQSLOD=1.6946;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:20,0:18:22.73:34,0,23	1/1:5,0:9:5.97:45,6,0	./.	0/0:21,0:13:2.98:0,3,22	0/0:21,0:21:8.98:0,9,77	1/1:24,0:24:1.24:82,1,0	0/1:13,0:14:27.17:51,0,27	1/1:26,0:26:7.77:49,8,0	1/1:8,1:15:8.84:107,9,0	0/0:19,0:19:13.38:0,13,170	0/0:17,0:17:19.72:0,20,240	0/1:16,0:18:15.93:74,0,16	0/1:14,0:17:21.93:87,0,22	0/1:13,0:19:25.57:26,0,43	1/1:11,10:24:14.79:297,15,0	0/1:8,8:18:27.53:331,0,28	0/0:18,0:18:19.94:0,20,266	0/0:10,0:13:14.69:0,15,180	0/0:12,0:11:0.82:0,1,115	0/0:24,0:24:17.79:0,18,363	0/0:24,0:24:18.36:0,18,246	0/1:17,0:16:19.89:74,0,20	0/1:16,0:15:25.56:104,0,26	1/1:16,0:19:20.06:192,20,0	1/1:20,0:20:0.70:71,1,0	1/1:7,0:14:12.46:198,12,0	1/1:7,0:7:12.51:248,13,0	1/1:11,0:11:12.45:159,12,0
chr10	23784356	.	ACG	A	2739.48	PASS	AB=0.942;AC=28;AF=0.500;AN=56;BaseQRankSum=-2.656;DP=577;FS=26.668;HRun=0;HaplotypeScore=98.1058;InbreedingCoeff=0.3488;MQ=53.25;MQ0=15;MQRankSum=1.687;QD=7.78;ReadPosRankSum=-4.954;VQSLOD=0.1823;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:20,2:21:32.22:284,32,0	1/1:7,0:7:2.96:45,3,0	0/1:14,0:6:8.85:9,0,58	0/0:20,0:7:10.61:0,11,79	0/1:3,19:22:8.06:98,0,8	1/1:31,0:31:28.20:333,28,0	0/1:12,0:11:26.82:79,0,27	1/1:29,0:29:72.33:560,72,0	1/1:18,0:18:11.20:126,11,0	0/0:19,0:19:34.21:0,34,464	0/0:20,0:20:33.46:0,33,480	0/1:21,0:19:7.97:115,0,8	1/1:21,0:21:0.07:149,0,0	0/1:16,0:16:38.17:75,0,38	0/0:25,0:25:41.91:0,42,369	0/0:19,0:19:16.73:0,17,325	0/0:22,0:22:7.15:0,7,395	0/0:19,0:18:7.67:0,8,255	0/1:19,0:18:1.43:1,0,335	0/0:27,0:27:10.62:0,11,641	0/0:40,0:39:41.43:0,41,625	1/1:13,0:13:14.60:117,15,0	1/1:22,0:21:8.25:292,8,0	1/1:28,0:28:11.93:328,12,0	1/1:25,0:25:14.37:270,14,0	0/1:18,0:18:37.73:38,0,271	0/0:14,0:13:1.25:0,1,207	0/1:14,0:13:7.14:7,0,185
chr10	23784681	.	A	AT	10336.73	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-13.455;DP=626;FS=1.368;HRun=7;HaplotypeScore=56.7366;InbreedingCoeff=0.9992;MQ=74.99;MQ0=0;MQRankSum=-2.659;QD=30.31;ReadPosRankSum=-0.374;VQSLOD=4.9412;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,33:33:84.21:994,84,0	1/1:0,12:12:32.87:394,33,0	0/0:21,0:21:48.06:0,48,455	0/0:9,0:9:20.24:0,20,178	1/1:0,30:30:87.27:1051,87,0	1/1:3,20:23:57.17:688,57,0	1/1:3,19:22:51.16:616,51,0	1/1:7,26:33:60.94:904,61,0	1/1:1,23:24:48.15:580,48,0	0/0:26,0:26:60.09:0,60,579	0/0:21,0:21:54.07:0,54,516	1/1:1,19:20:51.16:614,51,0	1/1:4,30:34:90.26:1074,90,0	1/1:2,16:18:48.15:580,48,0	0/0:16,0:16:45.07:0,45,435	0/0:16,0:16:45.07:0,45,435	0/0:19,0:19:48.06:0,48,458	0/0:21,0:21:59.60:0,60,579	0/0:19,0:19:51.05:0,51,479	0/0:28,0:28:78.10:0,78,742	0/0:20,0:20:54.08:0,54,521	1/1:2,34:36:99:1189,99,0	1/1:3,20:23:53.89:638,54,0	1/1:0,11:11:30.09:362,30,0	1/1:1,21:22:54.17:652,54,0	0/0:28,0:28:75.12:0,75,724	0/0:27,0:26:72.11:0,72,695	0/0:14,0:14:33.04:0,33,319
chr10	23785285	.	A	AG	10149.79	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=-16.495;DP=575;FS=1.803;HRun=3;HaplotypeScore=62.8676;InbreedingCoeff=0.9503;MQ=90.08;MQ0=0;MQRankSum=-7.005;QD=36.51;ReadPosRankSum=2.600;VQSLOD=5.5185;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,20:22:57.19:798,57,0	1/1:0,5:5:15.05:210,15,0	0/0:20,0:20:51.57:0,52,562	0/0:25,0:25:51.11:0,51,664	1/1:3,32:35:90.30:1254,90,0	1/1:1,18:19:54.18:756,54,0	1/1:1,16:17:45.15:630,45,0	1/1:5,28:33:84.24:1130,84,0	1/1:2,13:15:39.13:546,39,0	0/0:33,0:33:93.27:0,93,1105	0/0:21,0:21:54.16:0,54,648	1/1:0,17:17:51.17:714,51,0	1/1:1,24:25:63.21:882,63,0	1/1:0,17:17:48.16:672,48,0	0/0:20,0:20:29.06:0,29,233	0/0:21,0:21:58.48:0,58,268	0/0:14,0:14:36.11:0,36,432	0/0:18,0:18:54.07:0,54,603	0/0:22,0:22:63.17:0,63,736	0/0:20,0:20:51.15:0,51,612	0/0:25,0:25:69.21:0,69,827	1/1:0,18:18:54.03:707,54,0	1/1:1,20:21:60.20:840,60,0	1/1:0,11:11:30.10:420,30,0	1/1:0,16:16:42.14:588,42,0	0/0:21,0:21:53.43:0,53,230	0/0:37,0:37:75.39:0,75,452	0/1:7,0:7:2.92:3,0,65
chr10	23785918	.	T	TATGTGGC	25371.28	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=5.079;DP=544;FS=5.747;HRun=0;HaplotypeScore=121.4032;InbreedingCoeff=0.9851;MQ=89.60;MQ0=0;MQRankSum=-18.735;QD=101.08;ReadPosRankSum=1.428;VQSLOD=6.6531;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,13:25:42.14:1656,42,0	1/1:0,10:10:30.10:1248,30,0	0/0:26,0:26:75.26:0,75,1916	0/0:26,0:26:66.16:0,66,1701	1/1:2,15:18:42.14:1738,42,0	1/1:1,13:16:42.14:1751,42,0	1/1:2,12:16:42.14:1683,42,0	1/1:15,9:24:69.24:2649,69,0	1/1:1,14:19:48.16:1971,48,0	0/0:23,0:22:63.22:0,63,1762	0/0:18,0:18:51.17:0,51,1383	1/1:1,12:14:36.12:1493,36,0	1/1:1,16:19:48.16:2006,48,0	1/1:2,18:23:60.21:2413,60,0	0/0:21,0:21:60.21:0,60,1635	0/0:13,0:13:39.13:0,39,1015	0/0:24,0:24:72.25:0,72,1998	0/0:23,0:23:60.18:0,60,1616	0/0:32,0:32:96.33:0,96,2678	0/0:29,0:29:87.30:0,87,2366	0/0:12,0:12:36.12:0,36,1006	1/1:3,16:19:54.19:2233,54,0	1/1:0,10:13:30.02:1236,30,0	1/1:3,9:14:22.35:999,22,0	1/1:1,18:21:57.20:2296,57,0	0/0:20,0:20:60.20:0,60,1621	0/0:24,0:24:66.22:0,66,1732	0/0:2,0:2:6.02:0,6,168
chr10	23786112	.	AC	A	9254.22	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=13.307;DP=615;FS=10.183;HRun=5;HaplotypeScore=67.4596;InbreedingCoeff=0.9994;MQ=89.23;MQ0=0;MQRankSum=-4.679;QD=31.91;ReadPosRankSum=1.557;VQSLOD=5.1354;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,25:25:75.21:850,75,0	1/1:1,7:8:21.06:238,21,0	0/0:25,0:25:69.23:0,69,941	0/0:22,0:22:57.19:0,57,765	1/1:1,32:33:90.26:1020,90,0	1/1:0,20:20:57.16:646,57,0	1/1:0,17:17:42.12:476,42,0	1/1:3,32:35:96.26:1079,96,0	1/1:2,18:20:57.16:646,57,0	0/0:28,0:27:81.26:0,81,1095	0/0:35,0:35:99:0,105,1399	1/1:0,12:12:36.10:407,36,0	1/1:0,16:16:48.14:544,48,0	1/1:3,12:15:45.11:499,45,0	0/0:24,0:24:60.19:0,60,802	0/0:15,0:15:45.15:0,45,609	0/0:19,0:19:57.16:0,57,761	0/0:13,0:13:39.12:0,39,517	0/0:26,0:26:78.25:0,78,1040	0/0:29,0:29:87.29:0,87,1187	0/0:23,0:23:63.21:0,63,862	1/1:3,22:25:66.19:748,66,0	1/1:3,20:23:66.17:739,66,0	1/1:1,11:12:33.09:374,33,0	1/1:0,29:29:87.25:987,87,0	0/0:28,0:28:78.25:0,78,1050	0/0:22,0:22:63.21:0,63,861	0/0:16,0:16:42.14:0,42,575
chr10	23786200	.	AG	A	11921.68	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=9.996;DP=663;FS=3.810;HRun=2;HaplotypeScore=113.3555;InbreedingCoeff=0.9994;MQ=91.77;MQ0=0;MQRankSum=-6.467;QD=36.24;ReadPosRankSum=2.473;VQSLOD=4.7168;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,29:30:81.26:1052,81,0	1/1:0,21:21:60.09:740,60,0	0/0:33,0:33:99:0,99,1456	0/0:25,0:24:68.87:0,69,929	1/1:1,21:22:63.15:784,63,0	1/1:1,21:22:63.20:816,63,0	1/1:0,22:22:60.20:779,60,0	1/1:1,29:30:87.27:1116,87,0	1/1:2,29:31:90.28:1153,90,0	0/0:22,0:22:66.22:0,66,990	0/0:19,0:19:51.17:0,51,764	1/1:1,18:19:54.12:681,54,0	1/1:2,24:26:72.18:914,72,0	1/1:1,12:13:36.10:452,36,0	0/0:32,0:32:90.29:0,90,1317	0/0:17,0:17:42.14:0,42,629	0/0:23,0:23:69.18:0,69,989	0/0:22,0:22:60.20:0,60,899	0/0:24,0:24:72.23:0,72,1057	0/0:27,0:27:81.26:0,81,1193	0/0:27,0:27:81.23:0,81,1189	1/1:1,27:28:78.20:979,78,0	1/1:0,27:27:81.22:1032,81,0	1/1:0,16:16:45.15:584,45,0	1/1:3,19:22:66.19:839,66,0	0/0:24,0:24:72.24:0,72,1062	0/0:32,0:32:90.13:0,90,1289	0/0:7,0:7:21.07:0,21,315
chr10	23786228	.	A	AT	3662.59	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-4.307;DP=685;FS=2.533;HRun=4;HaplotypeScore=123.0337;InbreedingCoeff=0.9961;MQ=91.50;MQ0=0;MQRankSum=-0.887;QD=35.22;ReadPosRankSum=2.139;VQSLOD=2.3703;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,102,1142	0/0:20,0:20:57.16:0,57,646	0/0:33,0:33:90.24:0,90,1006	0/0:22,0:22:60.17:0,60,674	0/0:28,0:28:78.22:0,78,884	0/0:20,0:20:54.15:0,54,613	0/0:26,0:26:63.18:0,63,715	0/0:40,0:40:99:0,102,1148	0/0:33,0:33:93.26:0,93,1054	0/0:23,0:23:63.17:0,63,707	0/0:18,0:18:45.13:0,45,510	0/0:24,0:24:66.19:0,66,749	0/0:24,0:24:66.17:0,66,738	0/0:15,0:15:42.12:0,42,476	1/1:0,24:24:60.20:821,60,0	1/1:0,18:18:45.15:616,45,0	0/0:26,0:26:72.20:0,72,817	0/0:19,0:19:54.14:0,54,602	0/0:22,0:22:63.15:0,63,690	0/0:33,0:33:99:0,99,1123	0/0:25,0:25:75.18:0,75,830	0/0:27,0:27:75.20:0,75,841	0/0:25,0:25:69.18:0,69,773	0/0:18,0:18:45.09:0,45,488	0/0:20,0:20:54.15:0,54,612	1/1:4,19:23:29.15:767,29,0	1/1:2,31:33:93.30:1254,93,0	1/1:0,6:6:15.05:205,15,0
chr10	23786898	.	GA	G	7183.23	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=9.353;DP=435;FS=29.796;HRun=7;HaplotypeScore=44.1518;InbreedingCoeff=0.9766;MQ=82.70;MQ0=0;MQRankSum=-2.722;QD=25.38;ReadPosRankSum=0.970;VQSLOD=2.9033;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,36:36:96.22:979,96,0	1/1:0,4:4:12.03:122,12,0	0/0:12,0:12:29.75:0,30,327	0/0:22,0:22:60.15:0,60,725	1/1:3,10:13:30.07:306,30,0	1/1:2,11:13:30.06:305,30,0	1/1:4,10:14:24.05:245,24,0	1/1:3,24:27:72.12:719,72,0	1/1:1,12:13:30.07:306,30,0	0/0:13,0:13:39.12:0,39,491	0/0:10,0:10:30.08:0,30,364	1/1:1,10:11:32.29:313,32,0	1/1:2,12:14:36.08:367,36,0	1/1:0,19:19:54.12:551,54,0	1/1:2,15:17:42.10:429,42,0	1/1:1,11:12:30.07:306,30,0	0/0:26,0:25:75.22:0,75,928	0/0:22,0:22:60.66:0,61,756	0/0:14,0:14:36.12:0,36,453	0/0:20,0:20:54.16:0,54,666	0/0:13,0:13:39.12:0,39,491	1/1:1,13:14:30.07:306,30,0	1/1:1,15:16:42.09:428,42,0	1/1:3,21:24:57.13:582,57,0	1/1:2,9:11:18.04:184,18,0	1/1:1,10:11:30.07:306,30,0	1/1:0,12:12:36.08:367,36,0	1/1:0,2:2:6.01:61,6,0
chr10	23787018	.	TTA	T	516.06	PASS	AB=1.000;AC=13;AF=0.722;AN=18;BaseQRankSum=0.383;DP=164;FS=2.969;HRun=0;HaplotypeScore=27.3774;MQ=74.65;MQ0=1;MQRankSum=-1.531;QD=9.92;ReadPosRankSum=0.765;VQSLOD=3.0255;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	1/1:2,0:2:2.80:13,3,0	./.	./.	./.	./.	./.	0/0:24,0:24:1.41:0,1,3	./.	1/1:3,2:5:6.02:68,6,0	1/1:1,0:1:3.01:36,3,0	./.	./.	./.	./.	./.	1/1:6,3:9:6.02:72,6,0	1/1:5,7:12:6.02:70,6,0	1/1:13,4:17:27.05:291,27,0	0/1:6,0:6:36.84:52,0,37	./.	./.	./.	./.	./.	./.	0/0:5,0:5:3.47:0,3,25	./.
chr10	23787052	.	ATATATATATATATATATATGTGTG	A	873.74	PASS	AB=1.000;AC=10;AF=0.385;AN=26;BaseQRankSum=3.387;DP=104;FS=2.688;HRun=0;HaplotypeScore=70.7643;InbreedingCoeff=0.3533;MQ=37.79;MQ0=2;MQRankSum=-0.191;QD=20.32;ReadPosRankSum=1.699;VQSLOD=1.6316;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:4:6.02:0,6,114	1/1:1,0:1:3:26,3,0	./.	./.	0/0:3,0:3:0:0,0,0	./.	1/1:2,0:2:3.01:37,3,0	0/0:18,0:18:38.87:0,39,516	./.	0/1:5,0:5:19.85:27,0,20	./.	./.	0/0:2,0:2:0:0,0,0	./.	0/0:2,0:2:3.01:0,3,100	0/0:1,0:1:3.01:0,3,109	0/1:13,0:12:7.99:8,0,9	1/1:12,0:12:10.28:153,10,0	1/1:5,5:10:23.70:727,24,0	./.	./.	./.	./.	./.	./.	./.	0/0:3,0:3:8.92:0,9,208	./.
chr10	23787054	.	ATATATATATATATATATGTGTG	A	1195.46	PASS	AC=12;AF=0.462;AN=26;BaseQRankSum=0.874;DP=108;FS=1.154;HRun=0;HaplotypeScore=69.7173;InbreedingCoeff=0.5773;MQ=37.18;MQ0=2;MQRankSum=-0.488;QD=27.17;ReadPosRankSum=1.714;VQSLOD=1.3665;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:5:6.02:0,6,122	1/1:1,0:1:3.01:51,3,0	./.	./.	0/0:3,0:3:0:0,0,0	./.	1/1:2,0:2:3:35,3,0	0/0:20,0:20:47.39:0,47,412	./.	1/1:5,0:5:8.73:109,9,0	./.	./.	0/0:2,0:2:0.47:0,0,1	./.	0/0:2,0:2:3.01:0,3,100	0/0:1,0:1:3.01:0,3,92	1/1:14,0:13:5.87:42,6,0	1/1:10,0:10:20.85:331,21,0	1/1:11,1:12:26.97:737,27,0	./.	./.	./.	./.	./.	./.	./.	0/0:2,0:2:6.02:0,6,190	./.
chr10	23787070	.	ATGTGTG	A	1106.87	PASS	AB=0.673;AC=18;AF=0.450;AN=40;BaseQRankSum=-0.011;DP=167;FS=11.103;HRun=0;HaplotypeScore=57.4845;InbreedingCoeff=0.4613;MQ=43.89;MQ0=2;MQRankSum=0.033;QD=15.59;ReadPosRankSum=1.704;VQSLOD=1.2745;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:8:10.26:0,10,174	1/1:1,2:3:2.69:59,3,0	0/0:5,0:3:8.99:0,9,182	0/0:2,0:1:3.01:0,3,79	0/0:2,5:8:0:0,0,0	./.	1/1:0,4:4:3.01:53,3,0	1/1:16,7:24:17.79:261,18,0	./.	1/1:2,1:3:2.97:57,3,0	./.	1/1:0,0:1:3.01:62,3,0	1/1:3,1:4:2.89:52,3,0	./.	0/0:4,0:4:9.03:0,9,225	0/0:3,0:3:9.03:0,9,237	0/0:9,5:13:0:0,0,0	0/1:9,0:11:49.68:286,0,50	1/1:11,0:11:17.99:345,18,0	./.	1/1:3,0:3:3.01:60,3,0	0/1:0,4:4:0:0,0,0	0/0:2,4:6:0:0,0,0	./.	./.	0/0:3,0:3:9.03:0,9,179	0/0:4,0:4:9.03:0,9,219	./.
chr10	23787855	.	TGTGTGC	T	1252.06	PASS	AB=0.934;AC=9;AF=0.161;AN=56;BaseQRankSum=4.055;DP=609;FS=0.555;HRun=0;HaplotypeScore=152.8265;InbreedingCoeff=0.0365;MQ=48.36;MQ0=13;MQRankSum=0.425;QD=8.18;ReadPosRankSum=-2.258;VQSLOD=2.4805;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:10.82:0,11,452	0/1:10,0:10:7.28:7,0,239	0/0:32,0:11:24.51:0,25,206	0/0:39,0:19:6.26:0,6,225	0/0:20,0:20:3.03:0,3,239	0/0:20,0:19:28.65:0,29,260	0/0:25,0:24:40.09:0,40,450	0/0:27,0:26:48.15:0,48,431	0/0:17,0:17:22.90:0,23,382	0/0:28,0:27:55.38:0,55,1276	0/1:18,0:18:5.81:6,0,150	0/0:18,0:18:9.01:0,9,191	0/0:19,0:19:32.44:0,32,485	0/0:17,0:16:15.80:0,16,321	1/1:20,4:24:53.17:781,53,0	0/1:3,18:20:47.70:268,0,48	0/0:26,0:26:32.20:0,32,469	0/0:18,0:18:40.06:0,40,469	0/0:8,0:8:9.56:0,10,137	0/0:24,0:24:53.81:0,54,672	0/0:34,0:33:17.48:0,17,565	0/0:13,0:13:0.06:0,0,154	0/0:12,0:12:8.33:0,8,133	0/1:25,0:25:2.57:3,0,272	0/0:21,0:19:23.83:0,24,373	0/1:24,0:23:99:169,0,336	0/1:23,0:22:99:117,0,165	0/1:8,0:8:36.43:36,0,62
chr10	23791174	.	A	AATAT	3847.62	PASS	AB=0.557;AC=9;AF=0.161;AN=56;BaseQRankSum=-4.865;DP=572;FS=9.426;HRun=0;HaplotypeScore=92.0722;InbreedingCoeff=0.8396;MQ=68.04;MQ0=0;MQRankSum=-5.155;QD=41.37;ReadPosRankSum=0.374;VQSLOD=3.7010;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:63.21:0,63,1067	0/0:8,0:8:21.05:0,21,339	0/0:6,0:6:11.63:0,12,148	0/0:9,0:8:12:0,12,164	0/0:30,0:30:78.27:0,78,1320	0/0:13,0:13:36.11:0,36,604	0/0:14,0:14:33.11:0,33,578	0/0:44,0:44:99:0,111,1831	0/0:16,0:16:42.14:0,42,717	0/0:31,0:31:81.27:0,81,1383	0/0:24,0:24:57.18:0,57,959	0/0:24,0:24:57.18:0,57,970	0/0:36,0:36:87.27:0,87,1432	0/0:27,0:27:63.21:0,63,1065	1/1:4,0:9:12.04:212,12,0	1/1:4,1:19:27.09:509,27,0	0/0:19,0:19:51.15:0,51,841	0/0:14,0:14:42.14:0,42,736	0/0:15,0:15:36.12:0,36,605	0/0:32,0:32:72.25:0,72,1261	0/0:16,0:16:39.13:0,39,684	0/0:13,0:13:30.10:0,30,513	0/0:20,0:20:51.17:0,51,894	0/0:13,0:13:33.07:0,33,545	0/0:32,0:32:81.28:0,81,1406	0/1:7,26:34:20.92:1778,0,21	1/1:5,17:22:39.13:989,39,0	1/1:1,7:9:15.05:359,15,0
chr10	23791589	.	CGG	C	2789.47	PASS	AB=0.823;AC=25;AF=0.446;AN=56;BaseQRankSum=-2.479;DP=513;FS=18.071;HRun=12;HaplotypeScore=85.7923;InbreedingCoeff=0.5565;MQ=73.20;MQ0=1;MQRankSum=3.333;QD=9.72;ReadPosRankSum=7.256;VQSLOD=0.1225;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:23,1:27:17.54:18,0,58	0/0:9,0:9:3.48:0,3,45	0/0:22,0:17:2.47:0,2,161	0/0:28,0:19:16.46:0,16,157	0/0:15,0:15:3.46:0,3,25	0/0:19,0:20:11.11:0,11,59	0/0:18,0:19:14.45:0,14,138	0/1:16,0:17:3.10:3,0,81	0/0:10,0:10:3.01:0,3,45	1/1:8,6:14:14.98:152,15,0	1/1:13,6:19:5.52:60,6,0	0/0:23,0:23:10.58:0,11,125	0/0:15,0:15:5.96:0,6,44	0/0:13,0:13:14.91:0,15,145	1/1:9,1:22:4.43:33,4,0	0/1:7,1:15:12.81:25,0,13	1/1:12,20:34:59.74:562,60,0	1/1:5,16:21:36.05:366,36,0	1/1:13,7:20:20.68:185,21,0	1/1:15,8:23:14.94:152,15,0	1/1:15,5:20:1.17:211,1,0	0/0:21,0:21:6.01:0,6,70	0/0:10,0:10:5.93:0,6,39	0/0:9,0:9:8.95:0,9,86	0/0:12,0:12:9.01:0,9,96	1/1:8,19:28:60.11:574,60,0	1/1:6,18:24:57.10:579,57,0	1/1:1,2:3:6.01:61,6,0
chr10	23791616	.	CAGAGACAGAG	C	5141.43	PASS	AB=0.950;AC=27;AF=0.482;AN=56;BaseQRankSum=4.794;DP=527;FS=2.404;HRun=0;HaplotypeScore=162.3664;InbreedingCoeff=0.8234;MQ=64.80;MQ0=5;MQRankSum=-8.195;QD=28.25;ReadPosRankSum=-1.190;VQSLOD=4.1844;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:78.27:0,78,3025	1/1:0,4:4:3.31:94,3,0	0/0:32,0:19:27.40:0,27,472	0/0:50,0:27:42.27:0,42,1017	1/1:3,16:19:15.05:321,15,0	1/1:2,12:14:15.05:462,15,0	1/1:4,12:16:18.06:505,18,0	1/1:5,18:22:51.12:904,51,0	1/1:1,9:10:6.02:188,6,0	0/0:16,0:16:42.10:0,42,1585	0/0:10,0:10:24.08:0,24,1115	1/1:3,13:16:9.03:282,9,0	1/1:0,14:14:24.08:751,24,0	1/1:1,5:6:6.02:188,6,0	0/0:20,0:20:48.16:0,48,2034	0/1:18,1:19:45.78:46,0,1706	0/0:29,0:29:75.26:0,75,3411	0/0:31,0:31:66.20:0,66,2734	0/0:21,0:21:51.11:0,51,1389	0/0:23,0:23:51.17:0,51,2135	0/0:26,0:26:69.15:0,69,2843	1/1:2,6:8:2.13:66,2,0	1/1:0,9:9:15.05:451,15,0	1/1:1,11:12:13.71:467,14,0	1/1:2,10:12:15.05:416,15,0	0/0:28,0:27:69.23:0,69,2787	0/0:24,0:24:51.16:0,51,2066	0/0:4,0:4:12.04:0,12,346
chr10	23792517	.	G	GGAAGGTTTAGAGA	98160.02	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-6.144;DP=743;FS=0.000;HRun=0;HaplotypeScore=215.9880;InbreedingCoeff=0.9954;MQ=40.98;MQ0=1;MQRankSum=-8.310;QD=138.64;ReadPosRankSum=3.928;VQSLOD=4.9541;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,13:33:63.22:3698,63,0	1/1:4,9:19:38.70:2359,39,0	0/0:20,0:16:44.85:0,45,1502	0/0:15,0:14:36.12:0,36,1112	1/1:12,18:36:90.17:4374,90,0	1/1:3,17:21:57.20:3599,57,0	1/1:11,19:33:90.31:5288,90,0	1/1:28,6:31:78.25:4134,78,0	1/1:11,9:24:60.21:3813,60,0	1/1:15,16:36:99:5845,108,0	1/1:19,16:41:99:5576,105,0	1/1:10,16:27:75.26:4710,75,0	1/1:9,16:26:72.25:4358,72,0	1/1:9,20:33:90.31:5396,90,0	1/1:4,0:19:33.11:1845,33,0	1/1:5,0:32:54.19:3195,54,0	1/1:8,7:20:39.13:2220,39,0	1/1:3,4:11:21.07:1388,21,0	1/1:11,8:20:60.21:3221,60,0	1/1:16,11:29:81.28:4221,81,0	1/1:10,4:20:33.11:2109,33,0	1/1:10,17:31:81.28:4818,81,0	1/1:14,14:28:75.26:4163,75,0	1/1:7,7:18:39.13:2333,39,0	1/1:15,12:27:78.27:4296,78,0	1/1:6,1:41:99:5818,120,0	1/1:8,0:33:69.24:4137,69,0	1/1:1,0:8:21.07:1244,21,0
chr10	23795572	.	C	CA	7681.23	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-14.519;DP=455;FS=4.258;HRun=6;HaplotypeScore=40.2944;InbreedingCoeff=0.9721;MQ=70.27;MQ0=0;MQRankSum=-1.016;QD=33.40;ReadPosRankSum=-1.196;VQSLOD=4.4015;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,11:13:36.09:437,36,0	1/1:0,8:8:24.08:302,24,0	0/0:7,0:7:17.94:0,18,160	0/0:5,0:5:9.02:0,9,88	1/1:2,24:26:72.19:888,72,0	1/1:4,15:19:48.12:587,48,0	1/1:3,7:10:18.06:226,18,0	1/1:1,22:23:67.07:805,67,0	1/1:1,14:15:36.12:453,36,0	0/0:20,0:20:57.12:0,57,575	0/0:15,0:15:39.09:0,39,398	1/1:0,16:16:45.14:566,45,0	1/1:1,21:22:60.15:737,60,0	1/1:0,17:17:48.15:604,48,0	0/0:21,0:21:63.13:0,63,636	0/0:14,1:15:7.35:0,7,384	0/0:12,0:12:32.80:0,33,336	0/0:13,0:13:12.67:0,13,312	0/0:13,0:13:30.06:0,30,306	0/0:23,0:23:63.14:0,63,643	0/0:8,0:8:24.05:0,24,245	1/1:1,5:6:15.05:189,15,0	1/1:2,14:16:42.13:528,42,0	1/1:1,14:15:39.12:491,39,0	1/1:1,23:24:69.22:868,69,0	0/0:22,0:22:63.14:0,63,642	0/0:29,0:29:81.18:0,81,826	0/0:22,0:22:60.14:0,60,612
chr10	23796257	.	C	CCTCTCTCTCTCTCTCTCTCT	10919.38	PASS	AB=1.000;AC=37;AF=0.685;AN=54;BaseQRankSum=4.686;DP=395;FS=29.619;HRun=0;HaplotypeScore=210.2983;InbreedingCoeff=0.8463;MQ=67.14;MQ0=2;MQRankSum=-4.570;QD=53.01;ReadPosRankSum=-3.761;VQSLOD=2.4511;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,0:9:17.83:364,18,0	1/1:6,0:7:14.98:708,15,0	0/0:24,0:22:56.12:0,56,1279	0/1:18,0:17:35.69:36,0,219	1/1:13,0:13:11.77:100,12,0	1/1:15,1:18:39.49:1277,39,0	1/1:10,0:10:21:1019,21,0	1/1:25,0:18:46.73:649,47,0	./.	0/0:28,0:28:80.02:0,80,3805	0/0:16,0:16:42.03:0,42,1629	1/1:6,0:6:15.02:662,15,0	1/1:7,0:6:12.01:289,12,0	1/1:6,0:6:11.39:529,11,0	1/1:6,0:6:8.90:68,9,0	1/1:10,0:10:20.63:354,21,0	0/0:28,0:28:80.88:0,81,2768	0/0:10,0:10:30.03:0,30,1109	0/0:17,0:17:46.04:0,46,1668	0/0:25,0:25:75.18:0,75,3436	0/0:29,0:29:80.91:0,81,2682	1/1:4,1:6:3.01:217,3,0	1/1:10,0:10:16.66:987,17,0	1/1:13,0:13:33.03:1315,33,0	1/1:10,0:10:16.58:151,17,0	1/1:11,0:11:30.06:1078,30,0	1/1:16,0:16:35.68:976,36,0	1/1:3,0:4:12:141,12,0
chr10	23797396	.	GGAAT	G	3946.23	PASS	AC=36;AF=0.667;AN=54;BaseQRankSum=11.402;DP=375;FS=14.165;HRun=0;HaplotypeScore=59.4044;InbreedingCoeff=0.8291;MQ=42.05;MQ0=5;MQRankSum=-10.230;QD=20.24;ReadPosRankSum=1.595;VQSLOD=1.6021;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,4:4:3.01:58,3,0	1/1:3,9:8:9.03:174,9,0	0/0:18,0:10:18.06:0,18,435	0/0:25,0:12:27.09:0,27,678	1/1:2,7:7:12.04:230,12,0	./.	1/1:2,4:5:3.01:58,3,0	1/1:4,8:7:11.97:159,12,0	1/1:0,11:9:15.05:270,15,0	0/0:17,0:17:51.17:0,51,1343	0/0:13,0:13:39.13:0,39,1008	1/1:0,7:6:12.04:232,12,0	1/1:1,11:11:6.02:116,6,0	1/1:1,19:17:24.08:464,24,0	1/1:3,14:12:6.02:116,6,0	1/1:2,11:10:6.02:116,6,0	0/0:24,1:24:69.23:0,69,1833	0/0:20,0:20:54.15:0,54,1329	0/0:13,0:11:30.10:0,30,737	0/0:23,0:23:60.18:0,60,1526	0/0:20,0:20:57.20:0,57,1527	1/1:3,9:8:15.05:290,15,0	1/1:0,13:7:12.04:232,12,0	1/1:0,4:2:3.01:58,3,0	1/1:0,6:5:12.04:232,12,0	1/1:1,10:6:12.04:214,12,0	1/1:1,18:18:27.09:522,27,0	1/1:0,7:7:21.07:406,21,0
chr10	23797773	.	G	GA	14227.54	PASS	AB=0.725;AC=38;AF=0.679;AN=56;BaseQRankSum=17.857;DP=584;FS=2.329;HRun=1;HaplotypeScore=107.2438;InbreedingCoeff=0.8222;MQ=60.49;MQ0=1;MQRankSum=-3.396;QD=36.11;ReadPosRankSum=5.950;VQSLOD=4.5512;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,21:22:56.98:821,57,0	1/1:0,5:5:12.04:179,12,0	0/0:23,0:23:66.21:0,66,905	0/0:20,0:20:60.19:0,60,812	1/1:1,29:29:78.26:1155,78,0	1/1:0,27:27:72.24:1080,72,0	1/1:0,14:14:27.09:403,27,0	1/1:3,18:21:54.16:762,54,0	1/1:2,24:26:72.23:1060,72,0	0/0:25,0:25:75.24:0,75,1017	0/0:26,0:26:78.26:0,78,1087	1/1:0,17:17:33.11:495,33,0	1/1:0,23:23:60.20:877,60,0	1/1:0,28:28:72.24:1062,72,0	1/1:1,26:27:75.25:1127,75,0	1/1:0,26:25:60.20:894,60,0	0/0:30,0:30:90.30:0,90,1257	0/1:10,1:11:11.24:11,0,386	0/0:17,0:17:51.17:0,51,713	0/0:27,0:27:81.27:0,81,1133	0/0:22,0:21:60.17:0,60,819	1/1:0,15:15:39.13:583,39,0	1/1:0,14:14:36.12:534,36,0	1/1:0,14:14:33.03:494,33,0	1/1:1,16:17:39.13:583,39,0	0/1:2,14:16:38.80:541,0,39	1/1:1,35:36:99:1477,99,0	1/1:0,4:4:6.02:89,6,0
chr10	23799413	.	TG	T	8096.15	PASS	AB=1.000;AC=54;AF=0.964;AN=56;BaseQRankSum=0.961;DP=348;FS=6.613;HRun=3;HaplotypeScore=171.5771;InbreedingCoeff=-0.0205;MQ=59.50;MQ0=0;MQRankSum=-4.822;QD=23.26;ReadPosRankSum=3.034;VQSLOD=3.9746;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,5:7:11.59:144,12,0	1/1:3,11:14:41.72:363,42,0	0/1:11,0:11:13.85:14,0,240	0/1:6,0:5:33.01:73,0,33	1/1:2,15:17:42.14:384,42,0	1/1:3,12:15:36.91:332,37,0	1/1:0,4:4:9:81,9,0	1/1:6,7:13:28.41:252,28,0	1/1:3,7:8:21.02:195,21,0	1/1:1,12:13:36.54:363,37,0	1/1:1,12:13:31.73:279,32,0	1/1:1,12:13:38.95:343,39,0	1/1:0,13:13:39.03:359,39,0	1/1:2,16:18:51.87:469,52,0	1/1:3,17:20:55.34:482,55,0	1/1:1,11:12:33.03:310,33,0	1/1:1,5:6:17.95:154,18,0	1/1:0,6:6:18.03:181,18,0	1/1:1,3:4:9.01:88,9,0	1/1:2,19:21:56.47:516,56,0	1/1:0,1:1:3.01:35,3,0	1/1:2,14:16:45.04:422,45,0	1/1:0,20:20:50.84:456,51,0	1/1:1,8:9:20.94:188,21,0	1/1:3,15:18:44.88:398,45,0	1/1:3,18:21:57.04:550,57,0	1/1:2,18:20:53.86:494,54,0	1/1:1,6:7:18.02:168,18,0
chr10	23799435	.	CA	C	7979.34	PASS	AB=0.818;AC=52;AF=0.929;AN=56;BaseQRankSum=-0.070;DP=331;FS=1.868;HRun=3;HaplotypeScore=165.2964;InbreedingCoeff=0.4143;MQ=43.68;MQ0=0;MQRankSum=-2.472;QD=24.40;ReadPosRankSum=3.141;VQSLOD=4.1959;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:2,4:7:3.14:133,0,3	1/1:0,12:12:33.10:408,33,0	0/1:3,0:3:5.16:7,0,5	0/0:4,0:3:8.76:0,9,86	1/1:3,15:18:9:111,9,0	1/1:1,16:17:39.12:483,39,0	1/1:0,8:8:12.04:148,12,0	1/1:1,9:10:24.07:297,24,0	1/1:0,6:6:15.05:186,15,0	1/1:1,12:13:36.11:446,36,0	1/1:1,9:10:5.54:74,6,0	1/1:0,15:15:42.13:518,42,0	1/1:0,14:14:39.12:481,39,0	1/1:2,17:19:45.14:552,45,0	1/1:0,21:21:51.16:631,51,0	1/1:0,16:16:42.13:520,42,0	1/1:0,5:5:9.01:111,9,0	1/1:1,7:8:21.07:258,21,0	1/1:0,5:5:15.05:186,15,0	1/1:3,12:15:12.03:148,12,0	1/1:0,4:4:6.02:74,6,0	1/1:0,16:16:21.06:260,21,0	1/1:1,16:17:17.93:222,18,0	1/1:0,9:9:14.86:185,15,0	1/1:1,13:14:21.06:260,21,0	1/1:5,12:17:33.10:406,33,0	1/1:1,20:21:54.17:668,54,0	1/1:1,6:6:18.01:206,18,0
chr10	23799517	.	TC	T	10191.91	PASS	AB=0.778;AC=55;AF=0.982;AN=56;BaseQRankSum=0.728;DP=364;FS=0.000;HRun=2;HaplotypeScore=208.7335;InbreedingCoeff=-0.0326;MQ=61.00;MQ0=0;MQRankSum=-1.569;QD=28.00;ReadPosRankSum=3.899;VQSLOD=4.3816;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,9:9:18.05:205,18,0	1/1:1,3:4:8.98:89,9,0	1/1:7,3:10:21.45:231,21,0	0/1:5,2:7:5.75:96,0,6	1/1:0,12:12:33.05:372,33,0	1/1:1,20:21:57.12:643,57,0	1/1:1,12:13:36.11:413,36,0	1/1:0,23:23:66.20:770,66,0	1/1:0,8:6:12.03:128,12,0	1/1:1,15:16:45.14:532,45,0	1/1:1,11:12:33.06:369,33,0	1/1:3,17:20:46.97:527,47,0	1/1:1,15:16:46.38:523,46,0	1/1:4,18:22:49.87:534,50,0	1/1:4,19:23:47.73:562,48,0	1/1:1,13:14:36.99:415,37,0	1/1:0,9:9:23.99:243,24,0	1/1:1,3:4:5.51:68,6,0	1/1:4,6:10:24.94:267,25,0	1/1:0,18:18:51.15:591,51,0	1/1:0,5:5:3.01:34,3,0	1/1:2,14:16:36.71:410,37,0	1/1:2,10:12:24.07:275,24,0	1/1:0,3:3:6.02:67,6,0	1/1:1,12:13:32.56:383,33,0	1/1:1,8:9:27.08:317,27,0	1/1:1,29:30:84.20:956,84,0	1/1:0,5:5:15.04:171,15,0
chr10	23799545	.	A	AT	9052.79	PASS	AC=52;AF=1.000;AN=52;DP=333;FS=0.000;HRun=2;HaplotypeScore=217.0020;InbreedingCoeff=-0.0192;MQ=28.74;MQ0=0;QD=27.19;VQSLOD=4.0804;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,7:13:12.04:172,12,0	1/1:1,5:6:15.05:212,15,0	./.	./.	1/1:4,6:10:15.05:206,15,0	1/1:6,13:19:36.08:494,36,0	1/1:2,13:15:33.07:451,33,0	1/1:10,10:20:32.87:451,33,0	1/1:3,8:9:12.04:172,12,0	1/1:6,11:17:33.07:444,33,0	1/1:2,7:9:10.27:132,10,0	1/1:2,15:17:42.11:581,42,0	1/1:0,15:14:39.13:560,39,0	1/1:4,14:18:39.13:560,39,0	1/1:3,14:17:39.10:538,39,0	1/1:2,13:15:33.11:474,33,0	1/1:1,10:11:27.09:387,27,0	1/1:0,6:6:15.05:214,15,0	1/1:3,3:6:6.02:86,6,0	1/1:5,8:13:12.04:172,12,0	1/1:1,10:11:9.03:130,9,0	1/1:4,10:13:27.05:365,27,0	1/1:3,3:6:6.02:86,6,0	1/1:1,9:10:15.05:216,15,0	1/1:2,11:13:24.08:338,24,0	1/1:2,6:8:18.06:258,18,0	1/1:1,28:29:84.24:1181,84,0	1/1:0,4:4:12.04:172,12,0
chr10	23800322	.	GTA	G	4004.17	PASS	AB=0.943;AC=36;AF=0.667;AN=54;BaseQRankSum=-7.529;DP=385;FS=0.000;HRun=0;HaplotypeScore=157.0072;InbreedingCoeff=0.2814;MQ=59.70;MQ0=0;MQRankSum=5.628;QD=12.02;ReadPosRankSum=1.914;VQSLOD=2.9673;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,1:13:3.28:9,3,0	0/1:7,0:7:14.95:26,0,15	1/1:6,0:3:0.89:2,1,0	0/0:17,0:12:9.57:0,10,78	1/1:24,6:30:9.17:29,9,0	1/1:16,4:20:7.12:21,7,0	1/1:5,1:6:3.01:34,3,0	0/1:47,3:50:58.32:371,0,58	0/0:3,2:5:0.94:0,1,2	1/1:1,17:19:54.18:706,54,0	1/1:2,19:21:36.12:473,36,0	1/1:8,0:8:10.15:46,10,0	0/0:4,0:4:2.92:0,3,17	1/1:7,0:7:7.42:35,7,0	0/1:14,0:14:27.18:27,0,38	0/0:8,0:8:4.06:0,4,28	1/1:1,15:16:30.10:394,30,0	1/1:0,13:13:33.11:434,33,0	1/1:4,16:20:48.12:598,48,0	1/1:4,15:19:36.12:473,36,0	1/1:1,3:4:9.03:118,9,0	0/0:1,0:1:0.89:0,1,2	./.	1/1:4,0:4:1.80:5,2,0	0/1:21,2:23:1.82:2,0,2	0/1:15,3:18:30.59:143,0,31	0/1:14,1:15:44.73:57,0,45	0/0:12,0:11:14.85:0,15,68
chr10	23800324	.	A	ATG	4090.92	PASS	AB=1.000;AC=34;AF=0.607;AN=56;BaseQRankSum=3.410;DP=400;FS=12.986;HRun=0;HaplotypeScore=166.3965;InbreedingCoeff=0.3341;MQ=58.98;MQ0=1;MQRankSum=-4.722;QD=14.06;ReadPosRankSum=-6.700;VQSLOD=1.0929;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:3,11:14:5.61:113,6,0	1/1:4,3:7:14.90:206,15,0	1/1:7,0:3:1.82:5,2,0	0/0:18,0:13:9.59:0,10,101	1/1:14,18:32:23.83:459,24,0	1/1:7,14:21:29.88:540,30,0	1/1:3,3:6:2.77:16,3,0	1/1:38,15:53:99:1553,142,0	1/1:4,1:5:4.26:60,4,0	0/1:20,0:20:24.69:25,0,163	0/0:21,0:21:36.74:0,37,193	1/1:3,6:9:21.04:337,21,0	1/1:4,2:6:3.01:37,3,0	1/1:4,3:7:9:137,9,0	0/1:14,0:14:12.74:13,0,18	0/1:9,0:9:8.71:24,0,9	0/0:17,0:17:27.67:0,28,136	0/0:13,0:13:31.25:0,31,159	0/1:18,0:18:21.45:21,0,187	0/0:19,0:19:40.08:0,40,223	0/0:3,0:3:8.56:0,9,43	1/1:0,1:1:3.01:57,3,0	0/0:3,3:6:0:0,0,0	1/1:3,2:5:5.60:77,6,0	1/1:7,14:21:1.03:258,1,0	0/1:19,0:19:14.29:118,0,14	0/1:16,0:16:23.47:36,0,23	0/0:12,0:11:8.44:0,8,37
chr10	23800365	.	TATAA	T	4672.26	PASS	AB=1.000;AC=28;AF=0.519;AN=54;BaseQRankSum=-1.473;DP=410;FS=1.620;HRun=0;HaplotypeScore=144.6335;InbreedingCoeff=0.6954;MQ=57.44;MQ0=0;MQRankSum=-3.776;QD=19.97;ReadPosRankSum=-0.582;VQSLOD=4.1899;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,16:19:6.02:114,6,0	1/1:0,8:8:21.07:380,21,0	0/0:8,0:4:5.49:0,5,35	0/1:20,0:10:40.56:44,0,41	1/1:3,23:26:17.61:341,18,0	1/1:0,26:26:15.05:284,15,0	1/1:1,8:9:5.89:114,6,0	1/1:8,43:51:99:1969,123,0	./.	0/0:22,0:22:60.19:0,60,1511	0/0:25,0:25:71.97:0,72,1440	1/1:0,4:4:12.04:228,12,0	1/1:1,8:9:15.05:284,15,0	1/1:0,4:4:6.02:114,6,0	0/0:10,0:10:7.77:0,8,21	0/0:9,0:9:8.25:0,8,23	0/0:21,0:21:51.15:0,51,1237	0/0:11,0:11:27.06:0,27,569	0/0:22,0:22:60.19:0,60,1385	0/0:15,0:15:45.02:0,45,888	0/0:2,0:2:6.02:0,6,159	1/1:0,4:4:3.01:57,3,0	1/1:1,10:11:5.62:113,6,0	1/1:0,6:6:6:114,6,0	1/1:2,24:26:27.09:512,27,0	0/1:11,0:11:4.84:5,0,25	0/0:17,0:17:16.08:0,16,79	0/0:9,0:9:7.77:0,8,21
chr10	23800367	.	TAA	T	3637.70	PASS	AB=1.000;AC=37;AF=0.685;AN=54;BaseQRankSum=8.093;DP=408;FS=0.469;HRun=3;HaplotypeScore=137.4832;InbreedingCoeff=0.7341;MQ=57.51;MQ0=0;MQRankSum=-6.525;QD=13.13;ReadPosRankSum=2.978;VQSLOD=0.5852;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:18:5.70:37,6,0	1/1:8,0:8:20.69:131,21,0	0/0:9,0:4:1.34:0,1,5	0/1:19,0:10:42.67:56,0,43	1/1:27,0:27:20.13:136,20,0	1/1:26,0:26:14.67:94,15,0	1/1:9,0:9:5.78:37,6,0	1/1:50,0:50:99:935,122,0	./.	0/0:21,0:21:60.19:0,60,1095	0/0:25,0:25:71.97:0,72,1066	1/1:4,0:4:11.82:75,12,0	1/1:9,0:9:14.78:94,15,0	1/1:4,0:4:5.91:38,6,0	1/1:0,10:10:15.05:229,15,0	1/1:0,9:9:17.96:275,18,0	0/0:21,0:21:54.15:0,54,934	0/0:11,0:11:27.05:0,27,401	0/0:22,0:22:60.16:0,60,958	0/0:16,0:16:48.01:0,48,683	0/0:2,0:2:6.02:0,6,108	1/1:4,0:4:2.96:19,3,0	1/1:11,0:11:5.37:37,5,0	1/1:6,0:6:5.90:38,6,0	1/1:26,0:26:26.60:169,27,0	1/1:0,11:11:33.11:503,33,0	1/1:0,17:17:33.88:506,34,0	1/1:0,9:9:15.05:229,15,0
chr10	23803837	.	TACACAC	T	4422.29	PASS	AB=0.918;AC=43;AF=0.827;AN=52;BaseQRankSum=-1.331;DP=496;FS=9.161;HRun=0;HaplotypeScore=114.9255;InbreedingCoeff=0.1484;MQ=62.44;MQ0=10;MQRankSum=0.187;QD=10.89;ReadPosRankSum=1.309;VQSLOD=3.3319;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:15,0:17:10.18:36,0,10	1/1:2,4:6:12.04:243,12,0	./.	./.	1/1:24,5:29:6.01:122,6,0	1/1:15,11:26:33.58:670,34,0	1/1:11,1:15:12.01:167,12,0	0/1:28,0:28:26.68:27,0,62	1/1:8,8:16:9.03:182,9,0	0/1:19,0:20:50.15:164,0,50	1/1:21,7:28:9.03:183,9,0	1/1:10,5:16:17.97:345,18,0	1/1:7,3:10:6.02:122,6,0	1/1:11,1:12:5.98:61,6,0	0/0:14,0:20:6.02:0,6,114	0/0:9,0:19:6.02:0,6,120	1/1:17,2:19:8.88:182,9,0	0/1:7,0:7:11.38:13,0,11	1/1:13,1:14:6.01:103,6,0	1/1:7,6:14:15.05:285,15,0	1/1:13,1:13:0.30:0,0,0	1/1:14,3:17:3.01:61,3,0	1/1:9,5:14:9.50:183,10,0	0/1:13,3:18:33.71:76,0,34	1/1:11,7:18:15.04:304,15,0	1/1:9,6:15:12.67:283,13,0	1/1:12,8:23:30.10:548,30,0	1/1:7,1:8:3.01:61,3,0
chr10	23806582	.	G	GT	14158.74	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-7.057;DP=609;FS=13.057;HRun=9;HaplotypeScore=53.5904;InbreedingCoeff=0.9363;MQ=77.57;MQ0=1;MQRankSum=-5.067;QD=25.10;ReadPosRankSum=3.150;VQSLOD=4.6951;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,19:23:28.09:538,28,0	1/1:0,14:14:36.10:398,36,0	0/0:26,0:18:32.52:0,33,259	0/0:19,0:18:25.74:0,26,206	1/1:12,33:46:6.90:961,7,0	1/1:7,16:23:21.91:452,22,0	1/1:3,12:16:35.93:379,36,0	1/1:8,25:33:46.14:736,46,0	1/1:3,12:15:33.09:365,33,0	1/1:6,22:27:66.15:710,66,0	1/1:1,7:8:15.04:166,15,0	1/1:3,18:21:42.11:465,42,0	1/1:1,22:23:54.14:597,54,0	1/1:3,17:20:54.15:597,54,0	1/1:2,21:23:60.16:664,60,0	1/1:0,19:19:45.12:498,45,0	1/1:3,21:24:57.15:630,57,0	1/1:1,9:10:24.06:265,24,0	1/1:3,14:18:47.92:499,48,0	1/1:5,25:30:78:841,78,0	1/1:0,12:12:33.09:365,33,0	1/1:4,18:22:48.13:531,48,0	1/1:1,19:21:60:645,60,0	1/1:2,8:10:15.04:166,15,0	1/1:4,20:24:34.64:605,35,0	1/1:4,36:40:99:1182,108,0	1/1:10,20:30:34.11:604,34,0	1/1:0,11:11:27.07:299,27,0
chr10	23810068	.	AG	A	6485.38	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=12.857;DP=684;FS=11.660;HRun=1;HaplotypeScore=66.0348;InbreedingCoeff=0.9943;MQ=83.12;MQ0=0;MQRankSum=-1.113;QD=38.60;ReadPosRankSum=0.892;VQSLOD=4.6407;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:87.30:0,87,1377	0/0:11,0:11:33.11:0,33,527	0/0:22,0:22:57.18:0,57,845	0/0:18,0:18:54.17:0,54,818	0/0:26,0:26:72.23:0,72,1126	0/0:19,0:18:57.19:0,57,896	0/0:15,0:15:45.15:0,45,719	0/0:36,0:36:99:0,105,1615	0/0:33,0:33:93.23:0,93,1422	1/1:1,35:36:99:1427,105,0	1/1:0,26:26:72.24:1007,72,0	0/0:20,0:20:57.19:0,57,911	0/0:34,0:34:99:0,102,1617	0/0:25,0:25:75.13:0,75,1139	0/0:34,0:34:99:0,102,1605	0/0:27,0:27:81.28:0,81,1292	1/1:0,14:14:36.12:503,36,0	1/1:0,18:18:51.17:713,51,0	1/1:0,23:23:69.20:930,69,0	1/1:0,31:31:93.24:1276,93,0	1/1:0,20:20:45.15:629,45,0	0/0:26,0:26:78.27:0,78,1244	0/0:29,0:29:87.30:0,87,1386	0/0:23,0:23:69.19:0,69,1066	0/0:28,0:28:84.25:0,84,1293	0/0:30,0:30:90.31:0,90,1436	0/0:26,0:26:78.24:0,78,1220	0/0:4,0:4:12.04:0,12,192
chr10	23810269	.	GCAGACAGA	G	15364.36	PASS	AB=0.595;AC=45;AF=0.833;AN=54;BaseQRankSum=-4.824;DP=633;FS=6.747;HRun=0;HaplotypeScore=175.8769;InbreedingCoeff=0.7596;MQ=67.93;MQ0=3;MQRankSum=-8.356;QD=29.89;ReadPosRankSum=0.836;VQSLOD=3.8070;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:17,18:35:24.08:607,24,0	1/1:5,10:15:24.08:607,24,0	0/0:23,0:21:21.05:0,21,503	0/0:33,0:32:23.23:0,23,874	1/1:10,16:26:29.99:749,30,0	1/1:6,13:19:27.09:683,27,0	1/1:10,6:16:3.01:76,3,0	1/1:12,7:19:21.03:327,21,0	0/1:8,17:25:5.61:1091,0,6	1/1:10,17:28:51.16:1167,51,0	1/1:10,19:29:45.15:1060,45,0	1/1:6,8:14:21.07:531,21,0	1/1:8,17:25:36.12:909,36,0	1/1:6,19:25:45.15:1139,45,0	0/0:5,0:35:65.92:0,66,541	0/0:9,0:25:47.93:0,48,393	1/1:11,10:21:12.04:286,12,0	1/1:5,3:8:3.01:76,3,0	1/1:12,6:17:14.90:271,15,0	1/1:8,19:27:42.14:1063,42,0	1/1:17,12:29:15.05:342,15,0	1/1:7,12:20:27.09:604,27,0	1/1:11,16:27:36.12:906,36,0	1/1:10,8:18:3.01:76,3,0	1/1:8,17:25:39.13:987,39,0	1/1:9,11:21:37.01:854,37,0	1/1:9,15:24:39.13:953,39,0	./.
chr10	23811358	.	G	GT	7935.92	PASS	AB=0.779;AC=38;AF=0.679;AN=56;BaseQRankSum=-11.076;DP=453;FS=27.105;HRun=9;HaplotypeScore=44.0248;InbreedingCoeff=0.8123;MQ=77.07;MQ0=1;MQRankSum=0.395;QD=24.12;ReadPosRankSum=3.017;VQSLOD=3.3480;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,13:16:38.13:398,38,0	1/1:1,8:9:21.06:232,21,0	0/1:14,0:13:2.66:3,0,169	0/0:12,0:10:11.46:0,11,87	1/1:2,16:19:27.93:519,28,0	1/1:3,11:14:12.54:311,13,0	1/1:2,9:11:27.03:285,27,0	1/1:4,29:33:87.16:928,87,0	1/1:3,14:17:33.09:365,33,0	0/0:13,0:13:35.98:0,36,309	0/0:20,0:20:53.98:0,54,468	1/1:3,13:16:35.50:426,35,0	1/1:5,21:26:60.16:664,60,0	1/1:5,10:15:1.02:239,1,0	1/1:3,22:25:60.16:664,60,0	1/1:1,19:20:54.15:597,54,0	0/0:11,0:11:32.99:0,33,286	0/0:19,0:19:41.97:0,42,361	0/0:26,0:26:65.93:0,66,560	0/0:18,0:18:53.99:0,54,469	0/0:5,0:5:11.99:0,12,104	1/1:0,5:5:15.04:166,15,0	1/1:2,11:13:30.08:332,30,0	1/1:0,7:7:18.05:199,18,0	1/1:4,14:18:33.09:365,33,0	0/1:4,15:19:27.03:414,0,27	1/1:3,20:23:57.15:630,57,0	1/1:1,8:9:18.05:199,18,0
chr10	23811545	.	T	TA	18037.52	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-1.715;DP=528;FS=3.995;HRun=5;HaplotypeScore=65.1694;InbreedingCoeff=0.9656;MQ=72.05;MQ0=0;MQRankSum=-6.153;QD=35.44;ReadPosRankSum=3.939;VQSLOD=4.7250;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,14:15:42.14:553,42,0	1/1:1,5:6:12.04:158,12,0	0/0:11,0:11:18.04:0,18,193	0/0:8,0:8:21.03:0,21,216	1/1:3,37:40:99:1401,108,0	1/1:1,22:23:63.20:829,63,0	1/1:0,11:11:30.10:395,30,0	1/1:4,29:33:87.27:1128,87,0	1/1:0,20:20:60.20:790,60,0	1/1:2,13:15:39.11:499,39,0	1/1:1,26:27:75.20:967,75,0	1/1:3,22:25:60.20:790,60,0	1/1:2,20:22:63.20:828,63,0	1/1:0,20:20:54.18:711,54,0	1/1:1,22:23:63.20:829,63,0	1/1:1,22:23:63.20:829,63,0	1/1:0,8:8:24.08:313,24,0	1/1:0,10:10:24.08:316,24,0	1/1:1,17:18:51.14:642,51,0	1/1:2,32:34:96.31:1263,96,0	1/1:0,13:13:39.13:513,39,0	1/1:0,11:11:33.11:434,33,0	1/1:0,12:12:33.11:434,33,0	1/1:1,9:10:21.07:276,21,0	1/1:0,22:22:66.21:868,66,0	1/1:0,25:25:75.22:970,75,0	1/1:3,33:36:84.27:1105,84,0	1/1:2,5:7:15.05:197,15,0
chr10	23812131	.	A	AAAAGAAAGGAA	1455.57	PASS	AB=0.706;AC=9;AF=0.161;AN=56;BaseQRankSum=3.231;DP=498;FS=18.036;HRun=0;HaplotypeScore=154.6321;InbreedingCoeff=0.3042;MQ=64.21;MQ0=1;MQRankSum=-7.015;QD=11.11;ReadPosRankSum=-4.973;VQSLOD=-0.2908;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:15,0:19:93.65:94,0,331	0/0:6,0:12:16.35:0,16,196	0/0:11,0:9:19.31:0,19,316	0/0:13,0:11:14.88:0,15,194	0/0:9,0:27:50:0,50,420	0/0:23,0:23:60.12:0,60,1184	0/0:7,0:7:15.05:0,15,322	0/0:19,0:16:23.56:0,24,368	0/0:13,0:22:37.65:0,38,413	0/1:11,0:14:98.43:98,0,439	0/1:6,0:15:99:334,0,205	0/0:10,0:18:34.22:0,34,389	0/0:9,0:17:32.07:0,32,355	0/0:6,0:14:17.27:0,17,286	1/1:0,1:24:18.06:783,18,0	1/1:3,0:16:6.02:168,6,0	0/1:13,0:25:99:116,0,273	0/0:8,0:15:23.39:0,23,349	0/0:12,0:18:42.08:0,42,445	0/0:12,0:21:42.83:0,43,519	0/0:6,0:11:24.71:0,25,323	0/0:21,0:21:54.12:0,54,1265	0/0:9,0:22:41.05:0,41,427	0/1:5,0:18:4.64:5,0,162	0/0:7,0:16:23.93:0,24,277	0/0:13,0:26:51.18:0,51,494	0/0:12,0:24:36.60:0,37,407	0/0:6,0:9:24.21:0,24,237
chr10	23813896	.	A	ATG	271.10	PASS	AB=0.950;AC=7;AF=0.233;AN=30;BaseQRankSum=3.970;DP=474;FS=6.494;HRun=0;HaplotypeScore=165.2629;InbreedingCoeff=0.6345;MQ=46.32;MQ0=32;MQRankSum=-4.730;QD=5.12;ReadPosRankSum=0.503;VQSLOD=2.6028;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:5,0:3:9.03:0,9,139	0/0:6,0:4:6:0,6,72	0/0:77,0:73:99:0,196,3147	1/1:5,2:6:5.01:123,5,0	./.	./.	0/1:36,2:37:0.48:0,0,1564	./.	./.	0/0:22,0:22:63.18:0,63,999	0/0:22,0:22:57.19:0,57,929	0/0:31,0:31:87.30:0,87,1410	./.	./.	./.	./.	0/0:8,0:1:2.50:0,2,9	./.	./.	0/0:72,0:68:99:0,178,2846	0/0:85,0:81:99:0,223,3580	0/0:68,0:63:99:0,172,2734	0/0:3,0:2:0:0,0,0	1/1:3,2:5:5.08:101,5,0	1/1:0,3:3:9.03:151,9,0	./.
chr10	23813910	.	TAA	T	1671.59	PASS	AB=0.793;AC=10;AF=0.417;AN=24;BaseQRankSum=8.957;DP=542;FS=3.605;HRun=12;HaplotypeScore=177.5671;InbreedingCoeff=-0.6838;MQ=60.05;MQ0=21;MQRankSum=-4.532;QD=3.23;ReadPosRankSum=1.165;VQSLOD=0.2627;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/1:12,2:11:4.61:5,0,114	0/1:23,1:15:2.51:3,0,165	0/1:62,12:81:99:232,0,1667	0/0:4,0:4:0:0,0,1	./.	./.	0/1:24,1:45:56.93:57,0,581	./.	./.	0/1:19,5:26:39.08:39,0,616	0/1:26,3:29:22.38:22,0,768	0/1:28,2:34:27.26:27,0,658	./.	./.	./.	./.	./.	./.	./.	0/1:50,22:78:99:506,0,1224	0/1:71,19:94:99:435,0,2023	0/1:51,20:71:99:436,0,1195	./.	0/0:3,0:3:0:0,0,0	./.	./.
chr10	23813968	.	CA	C	32104.51	PASS	AB=0.838;AC=28;AF=0.500;AN=56;BaseQRankSum=-9.737;DP=6521;DS;FS=12.021;HRun=4;HaplotypeScore=1410.3784;InbreedingCoeff=-1.0000;MQ=28.29;MQ0=220;MQRankSum=-3.805;QD=4.92;ReadPosRankSum=12.565;VQSLOD=-0.0707;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:204,46:236:99:930,0,1906	0/1:142,83:208:99:2350,0,1070	0/1:140,16:21:76.22:324,0,76	0/1:134,11:21:99:225,0,160	0/1:194,27:186:99:382,0,1959	0/1:201,49:205:99:1139,0,2057	0/1:208,42:220:99:1288,0,1429	0/1:225,25:195:99:489,0,1678	0/1:217,33:216:99:712,0,2958	0/1:177,59:208:99:1693,0,1328	0/1:163,39:185:99:905,0,1200	0/1:186,64:228:99:1585,0,2535	0/1:190,60:233:99:1580,0,2777	0/1:199,51:230:99:1281,0,3055	0/1:169,81:228:99:2287,0,1320	0/1:166,82:220:99:2198,0,1442	0/1:210,40:245:99:881,0,2782	0/1:204,46:238:99:1148,0,2001	0/1:221,29:167:99:817,0,1196	0/1:184,38:202:99:805,0,1776	0/1:208,42:236:99:907,0,2056	0/1:186,30:189:99:548,0,2567	0/1:200,24:196:99:446,0,2539	0/1:189,61:240:99:1255,0,3293	0/1:148,72:190:99:2045,0,1102	0/1:212,38:217:99:964,0,1852	0/1:200,50:226:99:946,0,2181	0/1:137,68:188:99:1975,0,1271
chr10	23814056	.	T	TC	51100.06	PASS	AB=0.943;AC=41;AF=0.732;AN=56;BaseQRankSum=19.126;DP=6045;DS;FS=38.610;HRun=2;HaplotypeScore=1691.6327;InbreedingCoeff=-0.0019;MQ=29.57;MQ0=154;MQRankSum=-18.050;QD=8.75;ReadPosRankSum=6.841;VQSLOD=-0.2628;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:226,19:230:99:2986,262,0	1/1:154,6:114:99:1502,167,0	0/0:99,0:43:68.58:0,69,1242	0/0:106,2:43:99:0,110,1256	0/1:208,9:153:99:1183,0,399	1/1:208,14:193:99:2685,270,0	0/1:223,18:206:38.40:1512,0,38	0/1:202,7:133:99:658,0,151	0/1:244,5:200:99:2050,0,538	1/1:239,7:182:99:2247,273,0	1/1:214,12:166:99:2109,267,0	0/1:223,9:182:99:1704,0,853	0/1:193,8:157:99:1537,0,719	0/1:228,13:194:99:1757,0,1162	1/1:235,9:189:99:2745,301,0	1/1:143,7:102:99:1520,165,0	1/1:227,11:231:18.79:1974,19,0	1/1:229,14:230:99:2600,112,0	0/1:221,10:170:20.90:1658,0,21	1/1:215,8:188:99:3029,345,0	1/1:235,9:236:99:2331,266,0	0/1:220,12:178:99:1256,0,707	0/1:221,11:176:99:1389,0,841	0/1:226,12:225:99:1399,0,1014	1/1:180,10:140:99:1734,160,0	1/1:209,17:188:99:3181,366,0	1/1:228,6:198:99:3044,347,0	1/1:108,10:99:99:1309,162,0
chr10	23814062	.	T	TG	88931.40	PASS	AB=0.708;AC=44;AF=0.786;AN=56;BaseQRankSum=21.509;DP=6052;DS;FS=41.556;HRun=2;HaplotypeScore=1686.2339;InbreedingCoeff=0.1512;MQ=29.76;MQ0=132;MQRankSum=-18.594;QD=15.36;ReadPosRankSum=2.972;VQSLOD=-0.3011;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:171,79:232:99:3955,266,0	1/1:72,82:106:99:2392,190,0	0/0:106,7:44:33.52:0,34,1103	0/0:135,7:45:28.18:0,28,1049	0/1:125,81:146:99:2074,0,690	1/1:118,101:186:99:4035,251,0	1/1:182,68:206:99:2203,121,0	1/1:181,67:161:94.48:1847,94,0	0/1:141,109:210:99:3732,0,264	1/1:108,140:179:99:4532,326,0	1/1:114,97:152:99:3346,285,0	0/1:127,105:180:99:3316,0,763	0/1:120,92:167:99:2955,0,714	0/1:137,103:193:99:3417,0,954	1/1:121,125:192:99:4765,362,0	1/1:69,82:103:99:2564,155,0	1/1:147,103:232:99:4230,275,0	1/1:163,84:229:99:4322,221,0	1/1:200,50:185:99:2947,145,0	1/1:64,133:166:99:4970,400,0	1/1:146,100:234:99:3149,227,0	0/1:132,100:178:99:2863,0,809	0/1:142,77:166:99:2467,0,977	0/1:163,84:231:99:2420,0,895	1/1:93,73:114:99:2911,243,0	1/1:121,129:203:99:5434,402,0	1/1:62,166:188:99:5587,399,0	1/1:41,56:78:99:2498,201,0
chr10	23814063	.	G	GC	38472.87	PASS	AB=0.987;AC=37;AF=0.661;AN=56;BaseQRankSum=16.676;DP=6037;DS;FS=1.931;HRun=0;HaplotypeScore=1875.8663;InbreedingCoeff=-0.1954;MQ=29.78;MQ0=128;MQRankSum=-15.519;QD=6.67;ReadPosRankSum=10.504;VQSLOD=-0.3782;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:248,1:232:99:1523,0,123	1/1:149,0:100:66.49:979,66,0	0/0:117,0:46:69.96:0,70,1347	0/0:136,1:46:99:0,104,1295	0/1:201,1:143:99:913,0,895	0/1:217,4:186:41.69:1682,0,42	0/1:248,0:207:99:728,0,225	0/1:246,0:160:99:612,0,117	0/1:246,0:211:99:1504,0,689	1/1:248,0:179:99:2103,245,0	1/1:209,0:149:99:1572,186,0	0/1:236,1:183:99:1411,0,1146	0/1:214,0:169:99:1300,0,1028	0/1:239,1:193:99:1530,0,1347	1/1:250,0:192:99:2184,251,0	1/1:149,0:103:62.67:1160,63,0	1/1:246,1:230:18.44:1865,18,0	0/1:245,3:230:99:1751,0,226	0/1:248,2:184:99:1111,0,254	1/1:205,0:168:99:2472,332,0	0/1:248,2:233:24.89:1330,0,25	0/1:224,0:170:99:1250,0,1065	0/1:220,0:168:99:1101,0,1212	0/1:244,5:231:99:1048,0,1213	1/1:162,0:111:73.76:1187,74,0	1/1:249,0:202:99:2453,244,0	1/1:228,0:188:99:2685,285,0	1/1:97,0:77:99:1018,156,0
chr10	23814064	.	G	GA	53066.11	PASS	AB=0.881;AC=39;AF=0.696;AN=56;BaseQRankSum=15.917;DP=6022;DS;FS=0.911;HRun=1;HaplotypeScore=1838.5631;InbreedingCoeff=-0.0981;MQ=29.83;MQ0=120;MQRankSum=-13.472;QD=9.22;ReadPosRankSum=8.543;VQSLOD=-0.4697;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:217,12:232:58.33:2025,0,58	1/1:107,29:95:99:1627,134,0	0/0:114,0:47:71.50:0,71,1271	0/0:142,2:46:56.96:0,57,1198	0/1:150,42:138:99:1459,0,782	1/1:179,25:188:45.74:2456,46,0	0/1:219,19:208:99:1010,0,164	0/1:246,0:151:99:473,0,163	0/1:223,10:212:99:1860,0,646	1/1:194,44:177:99:2871,284,0	1/1:134,65:145:99:2647,254,0	0/1:198,37:187:99:2085,0,949	0/1:185,29:171:99:1820,0,902	0/1:210,33:196:99:2057,0,1149	1/1:183,58:192:99:3043,300,0	1/1:117,32:103:99:1599,115,0	1/1:214,17:233:99:2655,142,0	0/1:220,19:230:49.90:2283,0,50	0/1:229,12:181:99:1237,0,342	1/1:166,33:166:99:3278,364,0	1/1:210,30:232:34.52:1938,35,0	0/1:182,36:169:99:1941,0,918	0/1:176,44:171:99:1518,0,1100	0/1:222,17:231:99:1427,0,1095	1/1:103,41:106:99:2011,207,0	1/1:205,25:202:99:2953,204,0	1/1:208,16:192:99:3254,324,0	1/1:73,10:75:99:1539,187,0
chr10	23814136	.	G	GA	26148.75	PASS	AB=0.977;AC=27;AF=0.482;AN=56;BaseQRankSum=29.277;DP=6446;DS;FS=143.147;HRun=2;HaplotypeScore=1576.8599;InbreedingCoeff=-0.7876;MQ=27.95;MQ0=87;MQRankSum=-13.707;QD=4.22;ReadPosRankSum=-1.563;VQSLOD=0.0331;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:238,1:206:99:1119,0,476	0/1:184,4:154:99:1074,0,439	0/0:107,0:43:86.38:0,86,1199	0/0:146,0:53:78.05:0,78,1466	0/1:239,9:224:99:298,0,2219	0/1:233,4:191:99:1349,0,168	0/1:234,5:177:99:606,0,765	0/1:245,5:144:99:1418,0,169	0/1:241,7:200:99:1466,0,1254	0/1:239,6:183:99:1026,0,559	0/1:210,13:189:99:790,0,707	0/1:238,6:205:99:1365,0,1368	0/1:240,5:216:99:1184,0,1640	0/1:236,4:195:99:1325,0,1546	1/1:238,3:179:38.78:1433,39,0	0/1:230,1:174:99:1357,0,229	0/1:244,3:203:99:629,0,1008	0/1:245,0:214:99:724,0,721	0/1:246,1:162:99:1206,0,258	0/1:235,6:198:99:1237,0,225	0/1:233,0:208:99:240,0,1318	0/1:238,5:214:99:496,0,1932	0/1:233,7:220:99:568,0,2064	0/1:242,3:222:99:543,0,2274	0/1:223,7:205:99:1490,0,1001	0/1:244,4:179:99:1425,0,200	0/1:244,3:176:22.89:1483,0,23	0/1:94,2:86:99:296,0,374
chr10	23814138	.	A	AT	53516.59	PASS	AB=0.776;AC=32;AF=0.571;AN=56;BaseQRankSum=28.662;DP=6510;DS;FS=321.808;HRun=1;HaplotypeScore=1583.5912;InbreedingCoeff=-0.4762;MQ=27.83;MQ0=103;MQRankSum=-16.459;QD=8.55;ReadPosRankSum=-7.809;VQSLOD=0.6598;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:135,114:212:89.51:2631,0,90	0/1:138,59:159:99:1814,0,459	0/0:106,2:43:80.40:0,80,1100	0/0:135,6:52:8.27:0,8,1243	0/1:226,24:224:99:486,0,2567	1/1:132,116:197:58.45:3042,58,0	0/1:147,101:183:99:1829,0,325	1/1:108,140:153:99:3822,214,0	0/1:145,105:199:99:2755,0,1100	0/1:165,82:183:99:1970,0,405	0/1:179,47:189:99:1099,0,710	0/1:155,95:207:99:2359,0,1387	0/1:150,100:217:99:2219,0,1640	0/1:147,102:202:99:2610,0,1592	1/1:104,145:186:91.79:2818,92,0	0/1:121,125:183:99:2811,0,208	0/1:187,63:198:99:1671,0,639	0/1:189,61:210:99:2001,0,501	1/1:198,51:177:20.50:2541,20,0	0/1:162,88:196:99:2100,0,186	0/1:205,45:209:99:598,0,1163	0/1:217,32:219:99:1038,0,2012	0/1:209,41:227:99:955,0,2195	0/1:189,61:224:99:1425,0,2240	0/1:165,72:205:99:2433,0,1072	1/1:128,122:182:9.49:3155,9,0	1/1:130,119:186:27.12:2839,27,0	0/1:86,18:86:99:497,0,363
chr10	23814139	.	T	TC	24666.08	PASS	AB=0.982;AC=29;AF=0.518;AN=56;BaseQRankSum=29.995;DP=6310;DS;FS=371.295;HRun=1;HaplotypeScore=1512.1818;InbreedingCoeff=-0.6452;MQ=27.80;MQ0=108;MQRankSum=-15.288;QD=4.07;ReadPosRankSum=0.537;VQSLOD=-0.5517;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:220,3:188:99:1278,0,182	0/1:196,3:159:99:870,0,510	0/0:107,0:41:99:0,107,1365	0/0:142,0:53:86.16:0,86,1466	0/1:242,8:224:99:176,0,2771	1/1:234,3:188:24.21:1600,24,0	0/1:194,0:133:99:621,0,398	1/1:223,0:133:34.36:1456,34,0	0/1:249,0:198:99:1134,0,1135	0/1:241,2:182:99:937,0,511	0/1:228,1:190:99:406,0,840	0/1:240,3:204:99:1167,0,1459	0/1:237,8:212:99:1139,0,1711	0/1:248,1:203:99:1308,0,1672	1/1:240,4:185:60.09:1623,60,0	0/1:237,8:182:99:1540,0,203	0/1:226,1:176:99:638,0,711	0/1:226,4:190:99:891,0,554	0/1:247,1:176:99:932,0,119	0/1:249,1:193:99:947,0,322	0/1:225,1:185:99:262,0,1173	0/1:238,12:217:99:465,0,2036	0/1:249,1:227:99:288,0,2368	0/1:232,2:211:99:662,0,2257	0/1:237,1:207:99:1158,0,1096	0/1:240,9:178:99:1492,0,114	0/1:239,6:189:99:1420,0,163	0/1:104,1:87:99:257,0,489
chr10	23815009	.	T	TA	2029.66	PASS	AB=0.972;AC=35;AF=0.625;AN=56;BaseQRankSum=-2.470;DP=176;FS=5.442;HRun=9;HaplotypeScore=23.3952;InbreedingCoeff=0.6311;MQ=66.85;MQ0=0;MQRankSum=-0.903;QD=17.35;ReadPosRankSum=0.659;VQSLOD=2.5117;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,2:3:6.02:66,6,0	1/1:0,2:2:6.02:66,6,0	0/1:8,1:7:14.64:22,0,15	0/1:6,0:4:1.34:1,0,28	1/1:1,7:8:24.06:264,24,0	1/1:1,3:4:9.02:100,9,0	1/1:0,2:2:3.01:33,3,0	1/1:11,13:25:21.92:451,22,0	1/1:0,2:2:6.02:66,6,0	0/0:5,0:5:15:0,15,130	0/1:7,0:7:1.64:2,0,112	1/1:0,6:4:12.03:133,12,0	1/1:1,4:5:5.55:65,6,0	1/1:0,1:1:3.01:32,3,0	0/0:5,0:5:11.99:0,12,104	0/0:10,0:10:26.99:0,27,234	0/0:8,0:7:17.99:0,18,156	0/0:14,0:14:41.36:0,41,346	0/0:6,0:5:15:0,15,130	0/0:7,0:7:21:0,21,182	0/0:3,0:3:5.99:0,6,52	0/0:1,0:1:3:0,3,26	1/1:0,5:4:9.02:100,9,0	1/1:0,2:2:6.02:66,6,0	1/1:0,3:3:6.02:66,6,0	1/1:2,9:11:27.05:289,27,0	1/1:0,8:8:18.05:199,18,0	1/1:0,6:6:18.05:199,18,0
chr10	23815172	.	CTTT	C	727.29	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.799;DP=433;FS=16.283;HRun=3;HaplotypeScore=102.6764;InbreedingCoeff=0.9630;MQ=55.27;MQ0=5;MQRankSum=-0.069;QD=23.46;ReadPosRankSum=2.837;VQSLOD=-0.0532;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:8:24.01:0,24,456	0/0:6,0:6:15.05:0,15,321	0/0:9,0:6:18.06:0,18,314	0/0:7,0:6:11.11:0,11,259	0/0:13,0:13:24.07:0,24,520	0/0:22,0:22:54.17:0,54,1091	0/0:11,0:11:30.09:0,30,591	0/0:44,0:44:99:0,117,2289	0/0:14,0:14:34.88:0,35,762	0/0:21,0:21:63.21:0,63,1323	0/0:16,0:16:43.68:0,44,889	0/0:17,0:17:49.89:0,50,980	0/0:18,0:17:38.94:0,39,745	0/0:15,0:15:36.02:0,36,688	1/1:11,3:14:41.68:439,42,0	1/1:12,5:17:36.63:410,37,0	0/0:12,0:11:30.08:0,30,586	0/0:10,0:10:23.65:0,24,520	0/0:27,0:26:75.17:0,75,1378	0/0:12,0:12:30.10:0,30,589	0/0:9,0:9:27.09:0,27,587	0/0:14,0:14:31.41:0,31,645	0/0:13,0:13:27.98:0,28,617	0/0:15,0:15:42.08:0,42,938	0/0:18,0:18:46.89:0,47,882	0/0:22,0:22:60.67:0,61,1288	0/0:19,0:18:47.48:0,47,1024	0/0:9,0:8:24.08:0,24,543
chr10	23815176	.	CT	C	245.64	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.635;DP=439;FS=22.485;HRun=3;HaplotypeScore=92.6567;InbreedingCoeff=0.8854;MQ=54.26;MQ0=7;MQRankSum=1.457;QD=7.92;ReadPosRankSum=4.285;VQSLOD=-0.2240;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:20.74:0,21,271	0/0:7,0:7:15.05:0,15,215	0/0:10,0:6:15.05:0,15,213	0/0:7,0:6:2.70:0,3,159	0/0:15,0:14:23.11:0,23,308	0/0:22,0:21:48.16:0,48,679	0/0:11,0:11:33.10:0,33,450	0/0:42,0:42:99:0,114,1547	0/0:18,0:18:42.12:0,42,551	0/0:22,0:22:66.13:0,66,824	0/0:14,0:14:38.99:0,39,510	0/0:17,0:17:51.04:0,51,661	0/0:18,0:17:39.11:0,39,524	0/0:14,0:14:29.96:0,30,386	1/1:11,3:14:23.44:203,23,0	1/1:12,5:17:16.50:160,17,0	0/0:11,0:10:27.09:0,27,363	0/0:10,0:10:27.07:0,27,345	0/0:29,0:28:75.19:0,75,950	0/0:12,0:12:27.09:0,27,355	0/0:9,0:9:25.30:0,25,309	0/0:13,0:13:32.94:0,33,424	0/0:13,0:13:30.05:0,30,407	0/0:15,0:15:42.14:0,42,600	0/0:18,0:18:41.60:0,42,529	0/0:23,0:23:59.90:0,60,804	0/0:19,0:18:50.94:0,51,659	0/0:9,0:8:24.08:0,24,343
chr10	23815187	.	TCTTCCTTC	T	2165.31	PASS	AB=0.977;AC=17;AF=0.304;AN=56;BaseQRankSum=-0.175;DP=468;FS=2.376;HRun=0;HaplotypeScore=156.2436;InbreedingCoeff=-0.1121;MQ=50.16;MQ0=10;MQRankSum=0.435;QD=9.46;ReadPosRankSum=-1.564;VQSLOD=2.2843;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:13,0:12:99:126,0,257	0/1:7,0:7:26.89:27,0,182	0/0:9,0:5:8.62:0,9,92	0/0:6,0:5:4.94:0,5,104	0/0:14,2:15:23.89:0,24,529	0/1:24,0:23:99:138,0,844	0/0:17,0:16:45.10:0,45,574	0/0:41,0:41:99:0,109,1537	0/1:20,0:20:99:137,0,834	0/1:20,0:20:51.41:51,0,257	0/1:15,0:15:26.18:44,0,26	0/1:19,0:19:31.59:32,0,832	0/1:17,0:16:10.84:11,0,539	0/0:17,0:16:32.33:0,32,711	1/1:16,0:16:45.14:699,45,0	1/1:18,0:18:52.97:765,53,0	0/1:13,0:12:89.73:90,0,158	0/1:10,0:10:78.89:79,0,131	0/0:29,0:26:31.75:0,32,512	0/1:7,5:12:19.28:19,0,93	0/1:11,0:11:54.46:54,0,103	0/1:14,0:14:63.65:64,0,341	0/0:13,0:13:27.96:0,28,537	0/0:18,0:18:47.10:0,47,831	0/0:18,0:18:25.09:0,25,809	0/0:24,0:24:59.61:0,60,1133	0/0:22,0:21:56.55:0,57,1068	0/0:9,0:8:18.06:0,18,482
chr10	23815191	.	CCTTCCTTT	C	1249.98	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=2.653;DP=461;FS=18.067;HRun=0;HaplotypeScore=159.1420;InbreedingCoeff=0.0646;MQ=49.51;MQ0=10;MQRankSum=0.589;QD=7.18;ReadPosRankSum=-4.528;VQSLOD=0.0705;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:14,0:13:64.48:64,0,158	0/1:7,0:7:8.99:9,0,86	0/0:8,0:4:2.07:0,2,31	0/0:6,0:5:5.27:0,5,33	0/0:15,0:14:20.93:0,21,390	0/1:26,0:25:63.66:64,0,507	0/0:17,0:16:47.24:0,47,336	0/0:42,0:42:99:0,107,800	0/1:20,0:20:50.69:51,0,576	0/0:19,0:19:52.06:0,52,610	0/0:13,0:13:13:0,13,255	0/1:20,0:20:12.55:13,0,562	0/1:18,0:17:7.84:8,0,328	0/0:17,0:16:38.99:0,39,616	1/1:13,2:15:45.01:498,45,0	1/1:15,3:18:52.08:631,52,0	0/1:13,0:12:41.89:42,0,241	0/1:10,0:10:19.84:20,0,263	0/0:29,0:25:42.37:0,42,722	0/0:11,0:11:20.64:0,21,214	0/0:11,0:11:2.52:0,3,262	0/1:13,0:13:11.49:11,0,206	0/0:13,0:13:26.87:0,27,360	0/0:18,0:18:50.74:0,51,624	0/0:17,0:17:41.98:0,42,613	0/0:22,0:22:55.66:0,56,859	0/0:21,0:20:39.48:0,39,818	0/0:8,0:7:21.01:0,21,382
chr10	23815792	.	AT	A	4737.21	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=12.238;DP=485;FS=0.358;HRun=8;HaplotypeScore=44.9146;InbreedingCoeff=0.9921;MQ=72.62;MQ0=0;MQRankSum=0.742;QD=26.17;ReadPosRankSum=1.548;VQSLOD=5.3219;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,1:19:16.17:0,16,465	0/0:8,0:8:21.06:0,21,254	0/0:11,0:10:24.07:0,24,283	0/0:7,0:7:13.33:0,13,125	0/0:28,0:28:75.22:0,75,895	0/0:12,0:12:30.09:0,30,362	0/0:13,0:13:30.08:0,30,352	0/0:38,0:38:93.28:0,93,1115	0/0:20,0:20:57.17:0,57,689	1/1:3,18:21:57.05:538,57,0	1/1:2,21:23:60.09:579,60,0	0/0:10,0:10:24.07:0,24,290	0/0:18,0:18:48.15:0,48,580	0/0:11,0:11:27.08:0,27,326	1/1:1,18:19:51.08:491,51,0	1/1:2,14:16:39.06:377,39,0	1/1:0,16:16:45.07:435,45,0	1/1:2,14:16:42.07:406,42,0	1/1:2,17:19:51.08:493,51,0	1/1:1,33:34:99:956,99,0	1/1:0,17:17:48.08:464,48,0	0/0:10,0:10:27.08:0,27,317	0/0:16,0:16:45.14:0,45,544	0/0:11,0:11:33.06:0,33,382	0/0:17,1:18:22.17:0,22,541	0/0:12,0:12:30.09:0,30,362	0/0:22,0:22:63.18:0,63,750	0/0:20,0:20:57.17:0,57,689
chr10	23821239	.	TA	T	8249.52	PASS	AB=0.744;AC=49;AF=0.875;AN=56;BaseQRankSum=2.520;DP=571;FS=9.897;HRun=12;HaplotypeScore=60.9602;InbreedingCoeff=0.2732;MQ=61.51;MQ0=8;MQRankSum=-1.689;QD=15.03;ReadPosRankSum=2.362;VQSLOD=5.3289;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,39:46:98.59:766,99,0	1/1:0,9:9:20.92:163,21,0	0/1:9,1:4:12.64:13,0,31	0/1:5,1:6:6.27:6,0,95	1/1:7,23:29:53.72:417,54,0	1/1:1,15:16:35.86:279,36,0	1/1:2,10:12:32.87:254,33,0	0/1:7,19:27:5.13:316,0,5	1/1:3,21:24:56.78:441,57,0	1/1:4,22:24:65.71:507,66,0	1/1:6,12:18:38.82:300,39,0	1/1:6,14:18:35.81:273,36,0	1/1:8,16:24:38.57:301,39,0	1/1:1,10:10:23.91:186,24,0	0/0:20,2:22:13.62:0,14,487	0/1:17,4:21:21.52:22,0,343	1/1:11,24:33:65.72:511,66,0	1/1:5,10:16:25.90:192,26,0	1/1:4,8:13:22.11:167,22,0	1/1:8,24:31:62.48:476,62,0	0/1:2,11:13:3.54:159,0,4	1/1:3,16:19:17.50:318,17,0	1/1:3,21:24:53.77:418,54,0	1/1:4,19:23:50.80:395,51,0	1/1:2,16:18:38.84:302,39,0	1/1:3,19:22:58.80:447,59,0	1/1:6,16:21:50.78:392,51,0	1/1:0,11:11:29.89:232,30,0
chr10	23821736	.	TCG	T	4365.30	PASS	AB=0.980;AC=52;AF=0.963;AN=54;BaseQRankSum=-3.096;DP=317;FS=14.374;HRun=0;HaplotypeScore=110.2050;InbreedingCoeff=-0.0660;MQ=66.66;MQ0=2;MQRankSum=-2.179;QD=13.77;ReadPosRankSum=-0.076;VQSLOD=3.9922;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,9:14:20.76:145,21,0	./.	0/1:18,0:12:99:166,0,99	0/1:22,1:13:45.83:112,0,46	1/1:7,2:10:3:25,3,0	1/1:4,6:10:20.76:154,21,0	1/1:11,5:14:24.80:202,25,0	1/1:8,5:13:29.01:263,29,0	1/1:6,6:12:20.82:159,21,0	1/1:4,3:7:19.37:149,19,0	1/1:6,1:7:8.99:75,9,0	1/1:5,3:8:23.72:167,24,0	1/1:4,9:13:32.95:309,33,0	1/1:11,3:14:35.76:281,36,0	1/1:2,9:11:11.75:71,12,0	1/1:10,8:18:47.61:360,48,0	1/1:7,5:9:23.90:200,24,0	1/1:5,1:4:11.95:99,12,0	1/1:6,4:10:29.98:289,30,0	1/1:5,1:6:11.99:100,12,0	1/1:11,3:14:11.98:98,12,0	1/1:4,1:5:8.81:58,9,0	1/1:4,2:6:3:25,3,0	1/1:14,8:21:20.94:170,21,0	1/1:2,8:10:11.88:87,12,0	1/1:8,5:13:36.34:320,36,0	1/1:4,8:12:26.85:223,27,0	1/1:0,2:2:6.01:59,6,0
chr10	23821746	.	ACT	A	2728.69	PASS	AB=0.963;AC=47;AF=0.940;AN=50;BaseQRankSum=-1.436;DP=318;FS=7.303;HRun=0;HaplotypeScore=118.4272;InbreedingCoeff=0.0543;MQ=56.67;MQ0=7;MQRankSum=-2.901;QD=8.80;ReadPosRankSum=1.849;VQSLOD=2.9499;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,8:17:11.78:73,12,0	./.	0/1:31,0:10:31.18:31,0,139	0/1:31,0:12:35.95:36,0,45	0/1:7,1:8:0:0,0,0	1/1:7,5:12:20.77:153,21,0	1/1:9,4:10:14.71:120,15,0	1/1:8,5:13:31.87:254,32,0	1/1:7,4:11:17.82:132,18,0	1/1:4,3:7:18.82:128,19,0	./.	1/1:6,3:9:20.72:141,21,0	1/1:8,6:14:29.37:239,29,0	1/1:10,2:12:26.45:193,26,0	1/1:10,6:16:11.75:71,12,0	1/1:8,6:14:32.61:233,33,0	1/1:8,4:8:14.94:129,15,0	1/1:4,1:3:7.80:57,8,0	1/1:3,2:4:12.03:138,12,0	1/1:3,1:3:3:25,3,0	1/1:10,3:13:5.99:49,6,0	1/1:5,1:5:5.82:33,6,0	./.	1/1:12,7:18:14.92:119,15,0	1/1:2,8:10:5.88:36,6,0	1/1:6,4:10:26.89:230,27,0	1/1:3,7:10:20.34:151,20,0	1/1:0,2:2:6.01:57,6,0
chr10	23821754	.	ACG	A	1488.19	PASS	AB=0.788;AC=40;AF=0.800;AN=50;BaseQRankSum=1.913;DP=363;FS=5.755;HRun=0;HaplotypeScore=137.9449;InbreedingCoeff=0.5097;MQ=47.60;MQ0=14;MQRankSum=-1.100;QD=5.59;ReadPosRankSum=0.764;VQSLOD=3.0321;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:14,8:17:0:0,0,0	./.	0/0:42,0:8:8.05:0,8,77	0/0:42,1:8:8.69:0,9,47	0/1:7,1:8:0:0,0,0	1/1:6,5:11:5.85:44,6,0	1/1:10,4:11:5.83:52,6,0	1/1:6,5:11:31.16:247,31,0	1/1:7,4:11:7.46:48,7,0	1/1:6,2:8:20.52:117,21,0	./.	1/1:9,3:12:3.47:27,3,0	1/1:11,6:17:30.90:227,31,0	1/1:13,2:14:16.27:96,16,0	0/1:13,6:19:0:0,0,0	1/1:7,6:13:7.66:46,8,0	1/1:9,4:9:16.52:121,17,0	1/1:4,1:3:7.22:55,7,0	1/1:6,2:7:18.28:143,18,0	./.	0/1:7,3:8:0:0,0,0	1/1:9,1:9:2.88:15,3,0	0/1:7,0:7:0:0,0,0	1/1:9,7:15:2.91:23,3,0	0/1:3,8:11:0:0,0,0	1/1:6,4:10:23.34:174,23,0	1/1:7,6:13:15.61:107,16,0	1/1:0,2:2:6:56,6,0
chr10	23821758	.	AC	A	683.98	PASS	AB=0.958;AC=32;AF=0.667;AN=48;BaseQRankSum=4.861;DP=372;FS=7.878;HRun=2;HaplotypeScore=136.1368;InbreedingCoeff=0.3237;MQ=42.73;MQ0=17;MQRankSum=-0.196;QD=3.05;ReadPosRankSum=3.487;VQSLOD=0.0501;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:22,1:18:0.03:0,0,0	./.	0/0:49,1:8:15:0,15,161	0/0:46,2:9:20.01:0,20,203	0/1:8,0:8:0.01:0,0,0	1/1:9,1:10:2.90:16,3,0	0/1:13,1:11:11.85:15,0,12	0/1:11,0:11:28.81:39,0,29	1/1:9,2:11:5.10:28,5,0	1/1:8,0:8:11.81:49,12,0	./.	1/1:11,0:11:4.14:20,4,0	1/1:15,1:16:29.28:178,29,0	1/1:14,0:13:11.49:96,11,0	0/1:20,1:21:0.10:1,0,0	1/1:12,0:12:3.37:9,3,0	1/1:10,0:6:11.65:54,12,0	1/1:6,0:4:5.88:42,6,0	0/1:8,1:8:12.21:95,0,12	./.	0/0:10,0:8:0:0,0,0	0/0:10,0:9:2.68:0,3,18	0/0:7,0:7:0:0,0,0	1/1:16,0:15:1.60:5,2,0	./.	1/1:9,0:9:20.10:112,20,0	1/1:12,1:13:9.75:45,10,0	1/1:2,0:2:1.41:9,1,0
chr10	23821759	.	CCAA	C	1819.82	PASS	AB=0.845;AC=41;AF=0.759;AN=54;BaseQRankSum=5.567;DP=387;FS=5.347;HRun=0;HaplotypeScore=140.0090;InbreedingCoeff=0.5581;MQ=42.00;MQ0=20;MQRankSum=1.546;QD=7.46;ReadPosRankSum=4.056;VQSLOD=2.7645;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:19:1.85:0,2,17	1/1:0,0:1:0.47:1,0,0	0/0:52,0:8:18:0,18,223	0/0:52,0:10:25.85:0,26,282	0/1:6,2:8:0:0,0,0	1/1:8,1:10:3.01:32,3,0	1/1:13,2:13:8.09:69,8,0	1/1:9,0:9:12.45:159,12,0	1/1:8,3:11:8.76:74,9,0	1/1:6,0:7:19.68:128,20,0	./.	1/1:6,5:11:7.46:46,7,0	1/1:12,4:16:35.77:329,36,0	1/1:9,7:15:10.88:122,11,0	0/1:20,1:21:0:1,0,0	1/1:8,2:12:5.29:32,5,0	1/1:9,0:8:11.91:129,12,0	1/1:4,1:5:11.93:127,12,0	1/1:10,2:11:16.64:240,17,0	1/1:3,2:5:0.47:1,0,0	0/1:7,2:8:0:0,0,0	0/0:5,4:8:2.46:0,2,32	0/1:3,2:6:0.01:0,0,0	1/1:11,3:15:2.76:24,3,0	0/1:11,2:13:0:0,0,0	1/1:6,3:9:23.98:238,24,0	1/1:9,3:12:16.75:146,17,0	1/1:2,0:2:6.01:56,6,0
chr10	23821760	.	CAAA	C	668.55	PASS	AB=0.969;AC=42;AF=0.778;AN=54;BaseQRankSum=5.982;DP=389;FS=9.697;HRun=3;HaplotypeScore=142.4796;InbreedingCoeff=0.2238;MQ=39.68;MQ0=20;MQRankSum=2.241;QD=2.50;ReadPosRankSum=3.524;VQSLOD=-0.7451;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:19,2:19:1.25:18,1,0	1/1:1,0:1:2.68:11,3,0	0/0:53,0:8:18.03:0,18,264	0/0:55,0:10:26.30:0,26,341	0/1:8,1:8:0:0,0,0	1/1:9,1:10:8.12:36,8,0	1/1:15,0:13:3.55:55,4,0	0/1:9,0:9:29.83:30,0,48	1/1:10,0:11:10.43:47,10,0	1/1:6,1:7:0.78:20,1,0	./.	0/1:11,0:11:3.11:15,0,3	1/1:15,0:15:20.61:100,21,0	1/1:14,1:14:7.47:44,7,0	1/1:16,4:21:2.97:20,3,0	1/1:11,0:12:8.24:42,8,0	0/1:10,1:8:4.37:35,0,4	1/1:7,0:5:2.54:40,3,0	0/1:14,0:12:18.14:65,0,18	1/1:6,0:5:2.84:14,3,0	0/1:10,0:8:0:0,0,0	0/0:7,1:8:2.42:0,2,19	1/1:6,0:6:2.40:10,2,0	1/1:16,0:15:2.74:21,3,0	1/1:13,0:13:0.89:2,1,0	1/1:8,1:9:20.92:94,21,0	1/1:11,1:12:12.24:65,12,0	1/1:2,0:2:4.96:19,5,0
chr10	23821789	.	ACAG	A	8241.31	PASS	AB=1.000;AC=53;AF=0.946;AN=56;BaseQRankSum=-2.043;DP=548;FS=11.420;HRun=0;HaplotypeScore=135.4711;InbreedingCoeff=0.0709;MQ=42.24;MQ0=28;MQRankSum=4.426;QD=15.04;ReadPosRankSum=2.719;VQSLOD=4.1865;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:28,3:24:13.13:125,13,0	1/1:5,0:5:15.05:207,15,0	0/1:60,0:19:99:236,0,293	0/1:62,0:13:99:208,0,224	1/1:11,2:12:9.03:124,9,0	1/1:13,1:14:24.08:331,24,0	1/1:21,1:17:24.64:493,25,0	1/1:21,0:20:8.67:516,9,0	1/1:9,7:16:0.89:153,1,0	1/1:17,1:14:39.13:549,39,0	1/1:6,0:5:3.01:41,3,0	1/1:19,0:18:33.08:428,33,0	1/1:20,1:21:39.10:508,39,0	1/1:21,2:22:45.13:614,45,0	1/1:28,2:30:29.78:378,30,0	1/1:12,1:13:21.07:287,21,0	1/1:17,1:14:20.06:241,20,0	1/1:14,0:10:10.54:103,11,0	1/1:20,0:17:37.53:559,38,0	1/1:16,0:14:21.07:290,21,0	1/1:14,0:11:6.02:83,6,0	1/1:12,1:11:12.04:166,12,0	1/1:11,1:12:17.86:248,18,0	1/1:23,1:22:16.07:234,16,0	1/1:14,0:14:15.05:207,15,0	1/1:14,1:15:39.12:528,39,0	1/1:10,2:12:27.09:383,27,0	0/1:2,0:2:0:0,0,0
chr10	23821791	.	AG	A	8162.55	PASS	AB=0.828;AC=52;AF=0.963;AN=54;BaseQRankSum=-2.603;DP=527;FS=12.056;HRun=1;HaplotypeScore=119.7360;InbreedingCoeff=-0.0672;MQ=43.48;MQ0=28;MQRankSum=4.495;QD=15.49;ReadPosRankSum=3.794;VQSLOD=3.8376;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,21:21:13.29:170,13,0	1/1:0,5:5:15.05:207,15,0	0/1:46,12:20:99:236,0,275	0/1:49,13:14:99:208,0,187	1/1:2,11:12:9.02:124,9,0	1/1:1,12:13:24.08:330,24,0	1/1:4,17:18:31.90:500,32,0	1/1:6,15:20:14.53:588,15,0	1/1:9,5:14:1.33:137,1,0	1/1:5,13:14:39.08:497,39,0	1/1:0,6:5:3.01:41,3,0	1/1:0,19:18:33.11:450,33,0	1/1:2,19:21:39.04:462,39,0	1/1:2,21:22:45.13:588,45,0	1/1:3,26:29:30.10:415,30,0	1/1:1,10:11:21.07:286,21,0	1/1:1,15:12:21.05:268,21,0	1/1:0,13:10:12.04:157,12,0	1/1:4,13:14:30.62:484,31,0	1/1:0,16:14:21.07:290,21,0	1/1:2,12:11:5.89:83,6,0	1/1:3,9:10:12.04:166,12,0	1/1:1,11:12:17.76:248,18,0	1/1:7,17:22:16.07:219,16,0	1/1:0,13:13:15.05:207,15,0	1/1:3,13:16:39.07:479,39,0	1/1:2,8:10:27.04:323,27,0	./.
chr10	23825278	.	A	AC	472.81	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-2.884;DP=444;FS=0.000;HRun=0;HaplotypeScore=172.1117;InbreedingCoeff=0.7844;MQ=51.42;MQ0=0;MQRankSum=-1.034;QD=13.13;ReadPosRankSum=1.006;VQSLOD=4.4547;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:17.86:0,18,144	0/0:5,0:5:11.81:0,12,76	0/0:9,0:7:1.06:0,1,198	0/0:7,0:8:14.79:0,15,138	0/0:31,0:31:59.41:0,59,370	0/0:15,0:15:31.95:0,32,191	0/0:12,0:12:23.73:0,24,163	0/0:18,0:18:46.43:0,46,277	0/0:14,0:14:24.06:0,24,161	0/0:26,0:25:40.49:0,40,303	0/0:26,0:26:46.19:0,46,370	0/0:12,0:12:33.83:0,34,228	0/0:19,0:19:50.03:0,50,328	0/0:9,0:9:23.26:0,23,154	1/1:2,19:21:55.97:361,56,0	1/1:1,14:15:23.32:232,23,0	0/0:13,0:13:14.76:0,15,94	0/0:3,0:3:5.30:0,5,22	0/0:11,0:11:18.96:0,19,114	0/0:22,0:22:52.39:0,52,331	0/0:8,0:8:12.43:0,12,66	0/0:20,0:20:48.14:0,48,289	0/0:24,0:24:65.95:0,66,411	0/0:13,0:13:18.43:0,18,115	0/0:24,0:24:58.73:0,59,366	0/0:16,0:16:32.15:0,32,184	0/0:26,0:25:51:0,51,399	0/0:5,0:5:11.24:0,11,57
chr10	23825279	.	A	AT	7324.58	PASS	AB=0.900;AC=53;AF=0.946;AN=56;BaseQRankSum=-2.621;DP=446;FS=23.299;HRun=1;HaplotypeScore=173.7743;InbreedingCoeff=0.5240;MQ=51.72;MQ0=0;MQRankSum=-2.951;QD=16.72;ReadPosRankSum=4.158;VQSLOD=3.3662;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,13:19:38.32:284,38,0	1/1:1,4:5:11.82:75,12,0	0/1:8,1:7:32.69:33,0,123	0/0:8,0:8:14.01:0,14,80	1/1:11,20:31:61.04:409,61,0	1/1:7,8:15:32.58:245,33,0	1/1:3,10:13:32.54:241,33,0	1/1:1,16:17:50.94:465,51,0	1/1:5,9:14:29.65:235,30,0	1/1:4,21:24:59.55:514,60,0	1/1:5,20:25:64.33:461,64,0	1/1:2,10:12:28.81:168,29,0	1/1:4,15:19:46.74:323,47,0	1/1:4,5:9:21.66:170,22,0	1/1:21,0:21:59.10:395,59,0	1/1:15,0:15:41.48:271,41,0	1/1:9,5:14:14.81:96,15,0	1/1:2,0:2:3:26,3,0	1/1:7,5:12:27:279,27,0	1/1:6,16:22:34.40:327,34,0	1/1:4,5:9:14.30:79,14,0	1/1:5,15:20:49.81:330,50,0	1/1:6,18:24:60.91:425,61,0	1/1:4,9:13:20.39:133,20,0	1/1:8,17:25:53.21:396,53,0	1/1:5,12:17:41.89:363,42,0	1/1:8,17:25:53.61:484,54,0	1/1:0,5:5:14.71:98,15,0
chr10	23825282	.	TC	T	5251.46	PASS	AB=0.950;AC=54;AF=0.964;AN=56;BaseQRankSum=0.938;DP=443;FS=17.195;HRun=3;HaplotypeScore=149.2638;InbreedingCoeff=-0.0440;MQ=49.82;MQ0=0;MQRankSum=-2.300;QD=11.85;ReadPosRankSum=2.286;VQSLOD=2.3998;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,12:19:33:232,33,0	1/1:1,4:5:10.71:44,11,0	0/1:8,1:7:28:28,0,117	0/1:8,0:8:25.28:27,0,25	1/1:9,20:29:53.03:296,53,0	1/1:6,9:15:33.71:222,34,0	1/1:2,10:12:24.36:148,24,0	1/1:3,14:17:40.57:228,41,0	1/1:5,8:13:24.86:148,25,0	1/1:4,21:24:53.22:361,53,0	1/1:5,20:25:50.21:329,50,0	1/1:2,10:12:24.42:119,24,0	1/1:4,15:19:27.97:189,28,0	1/1:4,5:9:14.64:107,15,0	1/1:1,20:21:52.23:252,52,0	1/1:0,15:15:41.90:216,42,0	1/1:8,6:14:13.79:82,14,0	1/1:2,0:2:2.99:24,3,0	1/1:6,5:11:23.77:212,24,0	1/1:6,13:19:28.97:174,29,0	1/1:5,4:9:11.82:125,12,0	1/1:8,14:22:46.03:297,46,0	1/1:5,19:24:56.40:313,56,0	1/1:6,9:15:21.01:144,21,0	1/1:6,19:25:57.88:329,58,0	1/1:7,11:18:40.69:264,41,0	1/1:12,14:26:39.75:229,40,0	1/1:0,5:5:14.60:113,15,0
chr10	23826570	.	C	CT	4993.43	PASS	AB=0.671;AC=42;AF=0.750;AN=56;BaseQRankSum=-7.643;DP=594;FS=2.105;HRun=13;HaplotypeScore=76.0664;InbreedingCoeff=0.2198;MQ=73.20;MQ0=2;MQRankSum=1.208;QD=9.81;ReadPosRankSum=-0.960;VQSLOD=4.1512;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,1:26:13.83:151,14,0	0/1:3,7:10:1.32:123,0,1	0/1:34,1:23:28.81:29,0,55	0/0:30,0:21:23.62:0,24,146	1/1:12,21:34:13.20:392,13,0	0/1:5,11:16:52.26:137,0,52	1/1:3,6:10:20.86:182,21,0	0/1:21,8:29:19.63:250,0,20	1/1:4,12:16:6.26:202,6,0	1/1:5,4:28:55.81:355,56,0	1/1:3,0:21:46.83:269,47,0	0/1:5,11:16:17.06:143,0,17	1/1:6,10:16:15.02:139,15,0	0/1:7,12:19:37.63:115,0,38	0/0:7,0:27:32.91:0,33,110	0/0:4,0:27:49.59:0,50,155	1/1:0,3:18:29.04:158,29,0	1/1:2,1:8:8.83:64,9,0	1/1:3,2:17:30.26:187,30,0	1/1:4,6:30:67.23:424,67,0	1/1:1,2:9:8.85:70,9,0	1/1:7,16:23:38.96:344,39,0	0/1:11,15:27:31.02:188,0,31	1/1:2,13:15:6.34:202,6,0	1/1:4,17:20:31.85:283,32,0	1/1:9,15:24:15.39:266,15,0	0/1:9,26:35:2.94:290,0,3	1/1:3,1:4:3:28,3,0
chr10	23828252	.	A	AT	2978.53	PASS	AB=0.510;AC=43;AF=0.827;AN=52;DP=312;FS=0.000;HRun=2;HaplotypeScore=127.8653;InbreedingCoeff=0.3800;MQ=35.65;MQ0=0;QD=10.13;VQSLOD=1.4467;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:2,9:11:0.01:0,0,0	1/1:1,6:7:5.93:40,6,0	1/1:1,0:0:2.60:10,3,0	./.	1/1:2,27:29:8.74:60,9,0	0/1:1,13:14:0.01:0,0,0	0/1:0,7:7:0.02:0,0,0	1/1:1,10:11:33.08:453,33,0	0/1:0,11:11:0:0,0,0	1/1:1,18:19:54.18:776,54,0	1/1:2,20:22:5.91:40,6,0	0/1:0,8:8:0:0,0,0	1/1:3,10:13:3.01:38,3,0	./.	0/1:0,13:13:0.01:0,0,0	1/1:1,15:16:2.99:43,3,0	1/1:2,2:4:2.97:20,3,0	1/1:0,3:3:6.02:81,6,0	1/1:0,7:7:21.07:302,21,0	1/1:1,23:24:24.60:184,25,0	0/1:0,3:3:0:0,0,0	1/1:1,15:16:17.80:120,18,0	1/1:3,16:19:8.87:60,9,0	0/0:1,9:10:0.40:0,0,1	1/1:0,13:13:20.76:140,21,0	1/1:1,12:13:36.12:517,36,0	1/1:1,6:7:9.03:129,9,0	1/1:0,3:3:3.01:43,3,0
chr10	23828692	.	TCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCC	T	3878.21	PASS	AB=0.986;AC=27;AF=0.500;AN=54;BaseQRankSum=7.735;DP=293;FS=27.579;HRun=0;HaplotypeScore=253.1664;InbreedingCoeff=-0.5864;MQ=48.89;MQ0=38;MQRankSum=1.327;QD=14.63;ReadPosRankSum=8.376;VQSLOD=0.7392;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:16,0:14:60.91:124,0,61	0/1:8,0:8:30.07:129,0,30	1/1:2,0:2:3:27,3,0	0/0:5,0:2:2.37:0,2,8	0/1:20,0:19:55.43:320,0,55	0/1:15,0:15:20.55:313,0,21	0/1:8,0:7:18.87:142,0,19	0/1:16,0:10:65.28:68,0,65	0/1:11,0:11:21.91:347,0,22	0/1:10,0:10:99:211,0,255	1/1:4,0:2:2.99:24,3,0	0/1:14,0:13:90.25:230,0,90	1/1:4,0:4:9.01:103,9,0	0/1:9,0:9:3.61:4,0,85	0/1:8,0:6:99:155,0,117	0/1:2,0:2:9.85:10,0,48	0/1:13,0:11:73.08:395,0,73	0/1:9,0:6:30.71:160,0,31	0/1:7,4:10:99:215,0,119	0/1:9,0:8:10.87:11,0,142	0/1:16,0:9:37.79:38,0,38	0/0:11,0:11:3:0,3,26	0/1:19,0:18:0:0,0,0	0/0:9,0:6:4.18:0,4,22	0/1:12,0:11:23.31:300,0,23	0/1:15,0:13:8.15:274,0,8	0/1:13,0:13:76.47:280,0,76	./.
chr10	23828736	.	CCTCT	C	412.28	PASS	AB=1.000;AC=11;AF=0.229;AN=48;BaseQRankSum=-3.810;DP=377;FS=14.948;HRun=0;HaplotypeScore=93.3009;InbreedingCoeff=0.5369;MQ=37.88;MQ0=36;MQRankSum=1.521;QD=5.50;ReadPosRankSum=0.894;VQSLOD=0.6431;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:19:9.88:0,10,70	0/0:3,0:3:8.86:0,9,62	./.	./.	0/0:20,0:18:5.53:0,6,46	0/0:17,0:17:12.47:0,12,106	0/0:19,0:19:13.29:0,13,94	0/0:25,0:20:9.36:0,9,61	0/0:5,0:5:9.48:0,9,94	1/1:11,2:9:5.34:57,5,0	1/1:8,0:6:3.01:47,3,0	0/0:14,0:12:2.29:0,2,7	0/0:16,0:15:21.12:0,21,157	0/0:15,0:13:8.76:0,9,51	0/0:14,0:12:0.89:0,1,2	0/0:8,0:8:8.95:0,9,83	1/1:12,0:11:15.05:232,15,0	0/1:10,0:8:2.95:41,0,3	0/0:15,0:15:10.44:0,10,51	1/1:4,4:8:8.99:113,9,0	1/1:24,0:17:1.05:59,1,0	./.	./.	0/0:13,0:9:3.22:0,3,22	0/0:11,0:10:0.89:0,1,2	0/0:21,0:21:25.77:0,26,181	0/0:12,0:11:5.99:0,6,57	0/0:7,0:4:4.80:0,5,27
chr10	23831121	.	T	TG	15473.16	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-7.636;DP=607;FS=0.992;HRun=7;HaplotypeScore=68.6042;InbreedingCoeff=0.9599;MQ=75.38;MQ0=0;MQRankSum=-1.766;QD=29.47;ReadPosRankSum=1.998;VQSLOD=5.4904;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,20:22:51.16:616,51,0	1/1:2,6:8:12.04:145,12,0	0/0:16,0:18:23.05:0,23,261	0/0:12,0:12:26.13:0,26,211	1/1:3,42:45:99:1449,120,0	1/1:1,41:42:99:1413,117,0	1/1:1,16:17:39.12:471,39,0	1/1:5,28:33:81.21:943,81,0	1/1:2,19:21:54.17:650,54,0	1/1:5,23:28:69.21:832,69,0	1/1:4,25:29:69.13:814,69,0	1/1:1,8:9:24.07:289,24,0	1/1:5,16:21:39.12:471,39,0	1/1:2,16:18:42.13:507,42,0	0/0:25,0:25:69.07:0,69,651	0/0:27,0:27:75.12:0,75,724	1/1:1,18:19:45.14:544,45,0	1/1:4,7:11:21.06:254,21,0	1/1:3,19:22:57.14:653,57,0	1/1:3,28:31:81.21:958,81,0	1/1:0,9:9:24.07:290,24,0	1/1:1,21:22:60.18:723,60,0	1/1:2,27:30:62.71:737,63,0	1/1:0,17:17:45.14:544,45,0	1/1:0,21:21:57.17:687,57,0	1/1:4,21:25:63.19:761,63,0	1/1:4,19:23:54.17:651,54,0	1/1:0,2:2:6.02:72,6,0
chr10	23831687	.	ATAT	A	8133.16	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=11.011;DP=316;FS=6.189;HRun=0;HaplotypeScore=54.3196;InbreedingCoeff=0.9224;MQ=74.16;MQ0=0;MQRankSum=-4.145;QD=41.08;ReadPosRankSum=-0.816;VQSLOD=5.3021;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,17:17:39.13:637,39,0	1/1:0,7:7:18.06:292,18,0	0/0:12,0:9:6.62:0,7,108	0/0:16,0:10:5.35:0,5,81	1/1:0,19:19:34.40:592,34,0	1/1:0,18:18:43.03:701,43,0	1/1:0,10:10:27.09:447,27,0	1/1:2,38:40:99:1801,114,0	1/1:0,3:3:9.03:148,9,0	0/0:7,0:7:21.07:0,21,475	0/0:8,0:8:21.06:0,21,433	1/1:0,8:8:21.07:336,21,0	1/1:0,10:10:21.07:346,21,0	1/1:1,7:8:15.05:235,15,0	0/0:6,0:6:15.04:0,15,297	0/0:7,0:7:15.05:0,15,337	0/0:19,0:19:57.19:0,57,1223	0/0:14,0:14:42.14:0,42,899	0/0:11,0:11:33.11:0,33,725	0/0:10,0:10:30.10:0,30,675	0/0:8,0:8:24.08:0,24,541	1/1:0,4:4:12.04:200,12,0	1/1:0,3:3:9.03:138,9,0	1/1:0,3:3:6.02:100,6,0	1/1:0,18:18:48.16:783,48,0	1/1:0,8:8:24.08:381,24,0	1/1:0,11:11:27.09:448,27,0	1/1:0,11:11:33.11:550,33,0
chr10	23832492	.	GT	G	2335.33	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=5.798;DP=657;FS=5.863;HRun=12;HaplotypeScore=73.2305;InbreedingCoeff=0.9109;MQ=72.44;MQ0=0;MQRankSum=-0.335;QD=13.74;ReadPosRankSum=1.721;VQSLOD=4.1511;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:60.84:0,61,783	0/0:5,0:5:9.02:0,9,91	0/0:18,1:21:23.81:0,24,208	0/0:7,0:8:12:0,12,112	0/0:22,1:24:24.67:0,25,405	0/0:21,2:24:10.49:0,10,455	0/0:23,1:24:39.72:0,40,541	0/0:36,0:38:28.18:0,28,607	0/0:15,0:16:26.21:0,26,294	1/1:8,17:26:49.83:377,50,0	1/1:0,20:20:41.79:325,42,0	0/0:20,1:22:33.69:0,34,493	0/0:18,0:21:44.72:0,45,413	0/0:31,3:35:23.63:0,24,534	0/0:35,0:35:63.45:0,63,344	0/0:24,0:26:40.50:0,41,203	1/1:4,25:29:38.25:480,38,0	1/1:3,15:19:43.87:331,44,0	1/1:11,14:25:2.73:275,3,0	1/1:6,19:25:47.64:362,48,0	1/1:7,18:26:27.39:376,27,0	0/0:12,3:15:10.29:0,10,276	0/0:26,1:27:40.36:0,40,586	0/0:23,0:23:51.08:0,51,506	0/0:26,0:26:60.10:0,60,599	0/0:24,2:26:13.67:0,14,495	0/0:30,0:30:75.11:0,75,746	0/0:4,0:4:6.01:0,6,61
chr10	23832503	.	T	TTTC	1751.81	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=-2.900;DP=638;FS=6.004;HRun=0;HaplotypeScore=107.8542;InbreedingCoeff=0.7604;MQ=69.75;MQ0=0;MQRankSum=-3.412;QD=22.75;ReadPosRankSum=-1.678;VQSLOD=3.0224;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,102,1275	0/0:4,0:4:12.03:0,12,158	0/0:17,0:17:15.71:0,16,361	0/1:8,0:8:6.66:7,0,100	0/0:21,0:21:53.56:0,54,659	0/0:23,0:23:68.66:0,69,867	0/0:27,0:27:68.94:0,69,871	0/0:34,0:34:57.02:0,57,1017	0/0:14,0:14:29.60:0,30,398	0/0:25,0:25:66.03:0,66,602	0/0:22,0:22:56.90:0,57,494	0/0:25,0:25:71.65:0,72,887	0/0:21,0:21:53.07:0,53,646	0/0:30,0:30:45:0,45,777	1/1:6,29:41:55.31:984,55,0	1/1:3,19:28:51.02:887,51,0	0/0:29,0:29:75.03:0,75,698	0/0:20,0:20:57.01:0,57,507	0/0:22,0:22:56.83:0,57,496	0/0:25,0:25:59.16:0,59,521	0/0:26,0:26:71.78:0,72,630	0/0:16,0:16:25.61:0,26,502	0/0:21,0:21:63.10:0,63,830	0/0:22,0:22:57.09:0,57,757	0/0:24,0:24:63.08:0,63,845	0/0:26,0:26:72.14:0,72,929	0/0:28,0:28:75.11:0,75,1007	0/0:2,0:2:5.98:0,6,62
chr10	23833224	.	TG	T	4390.42	PASS	AB=0.983;AC=46;AF=0.821;AN=56;BaseQRankSum=7.023;DP=606;FS=2.206;HRun=1;HaplotypeScore=111.8149;InbreedingCoeff=-0.2023;MQ=74.44;MQ0=0;MQRankSum=-2.660;QD=7.24;ReadPosRankSum=12.200;VQSLOD=0.2285;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,1:16:34.94:183,35,0	1/1:11,0:11:3.66:74,4,0	0/1:13,0:13:9.98:10,0,234	0/1:17,2:18:48.43:48,0,114	1/1:23,0:23:13.84:192,14,0	1/1:29,0:29:47.12:257,47,0	0/1:22,0:22:21:122,0,21	0/1:31,0:31:1.90:142,0,2	1/1:13,0:13:30.90:119,31,0	0/1:24,0:24:7.80:82,0,8	1/1:22,0:22:32.80:201,33,0	1/1:17,0:17:18.56:177,19,0	1/1:17,0:17:39.80:186,40,0	1/1:29,0:29:27:265,27,0	0/1:34,3:37:34.76:288,0,35	0/1:23,0:23:36.43:146,0,36	0/1:30,0:30:38.24:206,0,38	1/1:6,1:7:19.17:112,19,0	1/1:23,0:23:26.66:139,27,0	1/1:23,0:23:12.89:175,13,0	0/1:22,0:22:49.18:91,0,49	1/1:13,1:14:19.90:140,20,0	1/1:28,0:28:17.36:203,17,0	1/1:20,0:20:44.31:177,44,0	1/1:26,0:26:17.26:187,17,0	1/1:26,0:26:5.09:149,5,0	1/1:32,0:32:33.61:281,34,0	0/1:9,0:9:38.12:38,0,87
chr10	23833225	.	GT	G	17014.08	PASS	AB=0.767;AC=54;AF=0.964;AN=56;BaseQRankSum=-5.493;DP=600;FS=11.272;HRun=5;HaplotypeScore=69.8562;InbreedingCoeff=-0.0384;MQ=74.67;MQ0=0;MQRankSum=-3.606;QD=28.36;ReadPosRankSum=4.042;VQSLOD=4.6313;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,15:16:39.11:441,39,0	1/1:1,10:11:30.09:340,30,0	0/1:9,4:13:91.81:92,0,138	0/1:14,6:19:51.54:181,0,52	1/1:2,21:23:63.18:714,63,0	1/1:1,28:29:78.22:885,78,0	1/1:2,18:20:51.14:578,51,0	1/1:3,28:31:84.24:953,84,0	1/1:0,13:13:36.10:408,36,0	1/1:1,22:23:66.10:710,66,0	1/1:0,21:21:63.18:714,63,0	1/1:2,15:17:45.10:497,45,0	1/1:0,17:17:45.13:510,45,0	1/1:2,27:29:78.22:884,78,0	1/1:8,29:37:81.23:910,81,0	1/1:4,19:23:57.16:646,57,0	1/1:5,25:30:75.21:850,75,0	1/1:1,6:7:21.06:235,21,0	1/1:1,22:23:66.19:748,66,0	1/1:3,20:23:63.16:703,63,0	1/1:4,17:21:42.12:476,42,0	1/1:1,13:14:39.11:441,39,0	1/1:2,26:28:68.94:782,69,0	1/1:0,20:20:51.15:578,51,0	1/1:2,24:26:72.21:816,72,0	1/1:2,24:26:72.18:798,72,0	1/1:1,30:31:87.25:987,87,0	1/1:4,4:8:12.03:136,12,0
chr10	23834974	.	T	TC	5254.63	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-14.969;DP=580;FS=1.597;HRun=2;HaplotypeScore=90.6918;InbreedingCoeff=0.9929;MQ=75.81;MQ0=0;MQRankSum=-0.119;QD=33.90;ReadPosRankSum=0.626;VQSLOD=4.8781;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:60.16:0,60,712	0/0:19,0:19:54.15:0,54,645	0/0:12,0:12:20.81:0,21,267	0/0:15,0:15:38.71:0,39,392	0/0:32,0:32:96.24:0,96,1131	0/0:26,0:26:75.23:0,75,910	0/0:17,0:17:50.95:0,51,530	0/0:26,0:26:78.23:0,78,944	0/0:25,0:25:69.19:0,69,826	1/1:0,25:25:75.17:936,75,0	1/1:0,31:31:81.21:1090,81,0	0/0:12,0:12:33.09:0,33,396	0/0:23,0:23:63.18:0,63,764	0/0:17,0:17:45.12:0,45,534	0/0:25,0:25:75.22:0,75,913	0/0:24,0:24:69.20:0,69,839	1/1:2,16:18:36.12:497,36,0	1/1:0,18:18:42.14:571,42,0	1/1:3,25:28:75.16:945,75,0	1/1:1,28:29:77.64:1009,78,0	1/1:0,6:6:15.05:207,15,0	0/0:20,0:20:54.08:0,54,624	0/0:25,0:25:75.22:0,75,912	0/0:7,0:7:21.06:0,21,248	0/0:14,0:14:39.12:0,39,479	0/0:18,1:19:15.67:0,16,625	0/0:37,0:37:99:0,102,1174	0/0:10,0:10:30.09:0,30,370
chr10	23835005	.	TC	T	13078.40	PASS	AB=0.722;AC=34;AF=0.607;AN=56;BaseQRankSum=-6.181;DP=555;FS=4.243;HRun=1;HaplotypeScore=71.4073;InbreedingCoeff=0.8858;MQ=85.89;MQ0=0;MQRankSum=-5.465;QD=36.84;ReadPosRankSum=4.441;VQSLOD=5.3703;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,20:20:60.20:838,60,0	1/1:0,13:13:36.11:503,36,0	0/0:22,0:21:56.86:0,57,852	0/0:17,0:17:47.99:0,48,697	1/1:0,26:26:75.22:1027,75,0	1/1:0,24:24:69.23:965,69,0	1/1:0,13:13:36.12:503,36,0	1/1:0,21:21:63.19:848,63,0	1/1:0,26:26:75.25:1049,75,0	0/0:24,0:24:69.23:0,69,1080	0/0:33,0:33:99:0,99,1501	1/1:0,17:17:51.17:713,51,0	1/1:0,27:27:72.24:1006,72,0	1/1:0,22:22:60.20:839,60,0	0/0:20,0:20:60.20:0,60,927	0/1:23,2:25:8.65:9,0,1003	0/0:17,0:17:45.15:0,45,702	0/0:16,0:16:35.97:0,36,537	0/0:20,0:20:60.19:0,60,918	0/0:26,0:26:75.25:0,75,1170	0/0:5,0:5:15.05:0,15,235	1/1:0,15:15:45.15:629,45,0	1/1:0,21:21:63.21:881,63,0	1/1:0,8:8:24.08:336,24,0	1/1:0,17:17:51.17:713,51,0	0/1:1,14:15:1.81:542,0,2	1/1:0,34:34:87.29:1216,87,0	1/1:0,11:11:33.11:461,33,0
chr10	23835211	.	A	AT	4629.52	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-3.713;DP=591;FS=0.759;HRun=7;HaplotypeScore=56.4242;InbreedingCoeff=0.9978;MQ=75.12;MQ0=0;MQRankSum=-2.295;QD=31.49;ReadPosRankSum=1.182;VQSLOD=5.0245;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:61.55:0,62,647	0/0:13,0:13:36.04:0,36,341	0/0:15,0:15:25.51:0,26,252	0/0:15,0:15:27.02:0,27,253	0/0:31,0:31:81.09:0,81,772	0/0:19,0:19:54.09:0,54,521	0/0:18,0:18:54.06:0,54,512	0/0:33,0:33:81.09:0,81,770	0/0:30,0:30:75.08:0,75,713	1/1:2,24:26:72.22:870,72,0	1/1:4,29:33:81.25:979,81,0	0/0:31,0:31:84.11:0,84,800	0/0:19,0:19:54.07:0,54,516	0/0:18,0:18:51.06:0,51,483	0/0:23,0:23:66.09:0,66,632	0/0:21,0:21:60.06:0,60,564	1/1:0,20:20:57.17:689,57,0	1/1:0,22:22:51.16:615,51,0	1/1:2,14:16:39.08:445,39,0	1/1:0,24:24:69.17:815,69,0	1/1:0,6:6:18.06:217,18,0	0/0:11,0:11:33.05:0,33,319	0/0:14,0:14:42.07:0,42,406	0/0:13,0:13:36.04:0,36,342	0/0:27,0:27:75.11:0,75,719	0/0:22,0:22:66.10:0,66,633	0/0:37,0:37:99:0,105,1006	0/0:9,0:9:27.04:0,27,261
chr10	23837894	.	T	TG	3518.18	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=7.902;DP=316;FS=0.551;HRun=7;HaplotypeScore=37.6310;InbreedingCoeff=0.9533;MQ=53.68;MQ0=16;MQRankSum=-0.142;QD=21.72;ReadPosRankSum=-0.693;VQSLOD=2.4006;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,1:17:28.65:146,29,0	1/1:1,5:6:15.05:181,15,0	0/0:15,0:3:9.01:0,9,87	0/0:19,0:8:20.96:0,21,189	1/1:2,10:12:21.06:254,21,0	1/1:1,6:6:15.05:181,15,0	1/1:1,12:13:27.08:326,27,0	1/1:8,9:12:27.06:310,27,0	1/1:0,7:7:21.06:254,21,0	0/0:14,0:13:27.04:0,27,260	0/0:6,0:6:15.01:0,15,140	1/1:2,6:7:12.04:145,12,0	1/1:1,7:8:18.01:201,18,0	1/1:3,9:12:27.04:310,27,0	0/0:15,0:15:39.06:0,39,377	0/0:12,0:12:36.06:0,36,348	0/0:18,0:17:45.07:0,45,434	0/0:8,0:8:24.04:0,24,232	0/0:11,0:6:12.02:0,12,116	0/0:10,0:10:21.02:0,21,203	0/0:26,0:26:66.10:0,66,637	1/1:0,7:7:18.06:217,18,0	1/1:2,8:10:30.09:356,30,0	1/1:3,9:11:24.03:273,24,0	1/1:2,4:5:12.04:145,12,0	1/1:2,0:8:20.09:102,20,0	1/1:1,0:6:14.34:73,14,0	1/1:0,0:3:8.65:45,9,0
chr10	23838029	.	TA	T	3154.57	PASS	AB=0.542;AC=25;AF=0.463;AN=54;BaseQRankSum=-10.639;DP=316;FS=4.109;HRun=10;HaplotypeScore=43.7954;InbreedingCoeff=0.8720;MQ=57.32;MQ0=2;MQRankSum=3.858;QD=19.84;ReadPosRankSum=0.916;VQSLOD=4.4339;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:5.29:0,5,273	1/1:2,5:7:11.99:104,12,0	0/0:1,0:1:3:0,3,29	./.	1/1:0,19:19:47.98:416,48,0	1/1:0,11:11:29.99:259,30,0	0/1:2,11:13:3.18:204,0,3	1/1:6,17:23:27.48:385,27,0	1/1:0,10:10:26.99:234,27,0	0/0:4,0:13:28.41:0,28,142	0/0:4,0:21:45.39:0,45,234	1/1:0,8:8:21:182,21,0	1/1:0,13:13:29.99:260,30,0	1/1:1,13:14:38.99:338,39,0	0/0:1,0:10:22.73:0,23,114	0/0:0,0:9:19.89:0,20,99	0/0:2,0:9:19.89:0,20,99	0/0:1,0:16:42.74:0,43,218	0/0:3,0:4:8.68:0,9,54	0/0:1,0:13:37.13:0,37,203	0/0:2,0:5:5.68:0,6,29	1/1:0,6:6:17.97:151,18,0	1/1:1,14:15:41.99:364,42,0	1/1:1,8:9:23.99:208,24,0	1/1:0,11:11:29.99:260,30,0	0/0:2,0:17:44.34:0,44,252	0/0:1,0:18:42.76:0,43,223	0/0:1,0:7:14.20:0,14,71
chr10	23839739	.	A	ACT	28972.26	PASS	AB=0.950;AC=49;AF=0.875;AN=56;BaseQRankSum=9.861;DP=593;FS=7.520;HRun=0;HaplotypeScore=142.9377;InbreedingCoeff=0.8426;MQ=73.30;MQ0=1;MQRankSum=-7.708;QD=53.16;ReadPosRankSum=4.901;VQSLOD=4.6288;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,14:18:45.15:912,45,0	1/1:0,7:7:21.07:426,21,0	0/0:15,0:15:39.13:0,39,615	0/0:12,0:12:36.12:0,36,568	1/1:6,31:38:96.33:1938,96,0	1/1:3,25:28:81.28:1638,81,0	1/1:5,13:19:51.18:1030,51,0	1/1:9,19:32:96.27:1772,96,0	1/1:2,17:19:48.16:973,48,0	1/1:4,32:35:99:2070,105,0	1/1:3,23:27:63.22:1272,63,0	1/1:4,18:22:60.21:1208,60,0	1/1:1,23:24:72.25:1458,72,0	1/1:3,19:23:63.17:1235,63,0	0/0:21,0:20:60.20:0,60,979	0/1:18,1:19:6.73:7,0,754	1/1:1,11:14:36.12:718,36,0	1/1:1,5:6:9.03:183,9,0	1/1:4,12:16:48.13:914,48,0	1/1:4,33:37:99:2127,105,0	1/1:0,9:9:27.09:547,27,0	1/1:2,22:24:69.24:1396,69,0	1/1:0,26:26:75.26:1520,75,0	1/1:1,5:6:12.04:244,12,0	1/1:3,21:24:63.22:1276,63,0	1/1:2,18:20:60.21:1204,60,0	1/1:4,35:39:99:2176,108,0	1/1:0,12:12:36.12:730,36,0
chr10	23840358	.	CCT	C	3048.52	PASS	AB=0.654;AC=21;AF=0.375;AN=56;BaseQRankSum=5.406;DP=703;FS=0.432;HRun=0;HaplotypeScore=127.4673;InbreedingCoeff=0.8361;MQ=75.50;MQ0=11;MQRankSum=-1.357;QD=15.71;ReadPosRankSum=2.401;VQSLOD=3.8209;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,4:10:20.57:218,21,0	0/0:13,0:12:11.78:0,12,163	0/0:55,1:27:4.30:0,4,477	0/0:85,0:45:58.43:0,58,1191	0/0:29,0:29:48.15:0,48,772	0/0:38,0:38:87.02:0,87,1388	0/0:15,0:13:18.53:0,19,302	0/0:43,0:43:95.46:0,95,1331	0/0:6,0:6:9.03:0,9,151	1/1:12,22:34:25.41:775,25,0	1/1:20,4:23:9.97:116,10,0	0/0:18,0:17:26.81:0,27,374	0/0:34,0:33:75.18:0,75,1147	0/0:17,0:16:27.08:0,27,420	0/0:25,0:24:27.06:0,27,274	0/0:27,0:27:42.09:0,42,457	1/1:10,1:11:5.97:58,6,0	1/1:6,3:9:9.03:115,9,0	0/1:8,9:17:26.85:316,0,27	1/1:6,13:18:18.02:229,18,0	1/1:3,7:10:12.04:153,12,0	0/0:20,0:20:39.12:0,39,610	0/0:33,0:32:60.19:0,60,972	0/0:14,0:14:12.98:0,13,202	0/0:33,0:32:86.66:0,87,1414	1/1:14,9:22:10.22:616,10,0	1/1:20,8:26:44.64:535,45,0	1/1:7,2:9:12.02:127,12,0
chr10	23840363	.	C	CTCTCTCGCTA	2779.69	PASS	AB=0.998;AC=18;AF=0.321;AN=56;BaseQRankSum=7.288;DP=757;FS=0.456;HRun=0;HaplotypeScore=229.9740;InbreedingCoeff=0.0322;MQ=71.74;MQ0=25;MQRankSum=-7.390;QD=9.14;ReadPosRankSum=-1.894;VQSLOD=2.2577;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:12:7.99:184,8,0	0/1:12,0:11:15.15:15,0,67	0/0:75,0:29:4.66:0,5,652	0/0:99,0:46:99:0,101,1953	0/0:29,0:29:32.92:0,33,1194	0/0:37,0:37:65.59:0,66,2100	0/1:16,0:14:35.72:36,0,405	0/1:37,0:37:51.29:51,0,1697	0/0:6,0:6:9.03:0,9,284	0/1:35,1:37:59.54:1036,0,60	0/0:15,11:27:10.17:0,10,77	0/1:18,0:17:28.79:29,0,499	0/1:34,0:33:52.86:53,0,1665	0/0:15,0:14:27.08:0,27,600	0/0:25,0:24:26.92:0,27,616	0/0:36,0:36:46.53:0,47,833	1/1:6,3:10:8.86:220,9,0	0/1:8,0:8:3.02:87,0,3	0/1:20,0:18:3.97:295,0,4	0/1:25,0:24:42.68:60,0,43	0/1:11,0:10:11.79:61,0,12	0/0:21,0:21:39.11:0,39,873	0/0:32,0:31:60.18:0,60,1516	0/0:13,0:13:14.82:0,15,254	0/0:35,0:33:81.06:0,81,2083	0/1:25,0:24:83.08:510,0,83	0/1:28,0:26:58.28:182,0,58	1/1:10,0:10:11.66:132,12,0
chr10	23840369	.	C	CGCTA	1364.80	PASS	AB=0.941;AC=11;AF=0.196;AN=56;BaseQRankSum=6.708;DP=767;FS=7.613;HRun=0;HaplotypeScore=166.5333;InbreedingCoeff=-0.2286;MQ=64.96;MQ0=29;MQRankSum=-5.063;QD=7.00;ReadPosRankSum=0.557;VQSLOD=1.7893;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:14,0:13:11.51:126,0,12	0/1:11,0:10:5.92:6,0,102	0/0:84,0:27:48.86:0,49,747	0/0:103,0:42:99:0,103,1647	0/0:29,0:29:46.79:0,47,910	0/0:38,0:38:87.28:0,87,1646	0/0:18,0:16:19.51:0,20,357	0/0:35,0:35:99:0,99,1714	0/0:6,0:6:12.04:0,12,227	0/1:31,1:32:99:271,0,340	0/0:25,0:24:16.98:0,17,152	0/0:17,0:16:22.71:0,23,440	0/0:35,0:34:76.76:0,77,1321	0/0:15,0:14:27.08:0,27,499	0/0:25,0:24:26.92:0,27,508	0/0:38,0:38:36.25:0,36,638	0/1:7,0:7:39.75:64,0,40	0/1:8,0:8:47.32:67,0,47	0/1:15,1:14:99:135,0,174	0/1:22,2:23:19.25:19,0,124	0/1:14,0:13:19.08:19,0,42	0/0:22,0:22:39.11:0,39,682	0/0:32,0:31:60.18:0,60,1137	0/0:12,0:12:14.92:0,15,266	0/0:37,0:35:80.33:0,80,1621	0/1:27,2:28:99:481,0,249	0/1:26,1:25:38.72:166,0,39	0/1:5,5:13:42:157,0,42
chr10	23840375	.	A	ATCTC	3170.63	PASS	AB=0.792;AC=46;AF=0.852;AN=54;BaseQRankSum=1.488;DP=759;FS=2.746;HRun=0;HaplotypeScore=160.0582;InbreedingCoeff=0.3263;MQ=61.20;MQ0=30;MQRankSum=-1.718;QD=5.84;ReadPosRankSum=2.690;VQSLOD=2.7043;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:13:6.02:95,6,0	1/1:11,0:10:8.96:118,9,0	0/0:85,0:25:9.54:0,10,150	0/0:97,0:37:9.42:0,9,76	1/1:30,0:30:3.89:50,4,0	1/1:36,0:37:16.85:197,17,0	1/1:18,0:16:2.97:11,3,0	1/1:35,0:35:21.22:129,21,0	0/0:6,0:6:0.47:0,0,1	1/1:34,0:34:23.06:342,23,0	0/1:25,0:24:0.61:15,0,1	1/1:15,0:14:5.51:37,6,0	1/1:28,0:29:6.49:114,6,0	1/1:14,0:13:8.86:59,9,0	./.	0/1:11,26:38:17.03:404,0,17	1/1:8,0:8:3.01:49,3,0	1/1:8,0:8:6.46:70,6,0	1/1:14,0:12:6.02:94,6,0	1/1:25,0:24:2.96:45,3,0	1/1:16,0:14:4.26:42,4,0	1/1:21,0:21:6:73,6,0	1/1:31,0:30:6.02:100,6,0	1/1:11,0:11:9.49:117,9,0	1/1:40,0:38:17.09:243,17,0	1/1:29,0:28:33.34:457,33,0	1/1:30,0:28:30.25:310,30,0	1/1:9,0:9:9.42:124,9,0
chr10	23840403	.	C	CTGTGTGTG	4089.05	PASS	AB=0.946;AC=36;AF=0.667;AN=54;BaseQRankSum=-3.884;DP=569;FS=10.994;HRun=0;HaplotypeScore=168.5901;InbreedingCoeff=0.4173;MQ=49.54;MQ0=12;MQRankSum=-0.268;QD=10.20;ReadPosRankSum=-2.552;VQSLOD=1.3164;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:12,0:11:3.01:96,3,0	1/1:11,0:13:0.47:1,0,0	0/0:39,0:14:11.53:0,12,185	0/0:40,0:7:3.01:0,3,35	1/1:8,9:20:2.95:22,3,0	1/1:15,12:32:2.94:68,3,0	1/1:16,0:14:9.01:198,9,0	1/1:33,0:33:39.13:876,39,0	1/1:6,0:6:3.01:35,3,0	0/1:25,0:24:25.13:25,0,272	0/1:19,0:19:10.79:11,0,76	1/1:8,5:12:3.01:113,3,0	1/1:13,0:20:12.03:146,12,0	1/1:11,0:10:13.60:320,14,0	0/1:25,0:24:1.30:1,0,293	0/0:34,0:35:30.47:0,30,379	0/1:10,0:9:15.26:15,0,165	0/0:8,0:8:8.12:0,8,177	0/1:16,0:16:1.71:2,0,35	0/0:19,0:18:18.40:0,18,217	0/0:14,0:11:5.59:0,6,59	1/1:19,0:19:12.04:301,12,0	1/1:18,0:17:27.07:576,27,0	./.	0/1:16,6:24:0.03:0,0,0	1/1:11,8:21:32.62:686,33,0	1/1:30,0:28:11.86:216,12,0	1/1:10,0:10:23.10:381,23,0
chr10	23840410	.	T	TGTGTGTGT	4003.91	PASS	AB=1.000;AC=35;AF=0.648;AN=54;BaseQRankSum=-3.884;DP=483;FS=13.157;HRun=0;HaplotypeScore=129.1894;InbreedingCoeff=0.4694;MQ=48.72;MQ0=12;MQRankSum=-0.536;QD=12.71;ReadPosRankSum=-3.139;VQSLOD=1.1441;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:10,0:9:3.01:96,3,0	1/1:12,0:10:0.47:1,0,0	0/0:28,0:8:11.53:0,12,185	0/0:26,0:7:3.01:0,3,35	1/1:19,0:18:2.95:22,3,0	1/1:24,0:24:3.01:68,3,0	1/1:9,0:8:9.03:198,9,0	1/1:26,0:26:37.67:801,38,0	1/1:5,0:5:3.01:35,3,0	0/1:22,0:21:25.13:25,0,272	0/1:17,0:16:10.79:11,0,76	1/1:13,0:12:5.93:130,6,0	1/1:19,0:18:9.49:117,9,0	1/1:9,0:8:13.60:320,14,0	0/0:28,0:27:15:0,15,312	0/0:34,0:34:30.47:0,30,379	0/1:10,0:9:18.27:18,0,135	0/0:7,0:7:8.12:0,8,177	0/1:14,0:14:1.71:2,0,35	0/0:22,0:21:18.39:0,18,217	0/0:12,0:9:5.59:0,6,59	1/1:17,0:17:12.04:301,12,0	1/1:15,0:14:27.07:576,27,0	./.	0/1:14,0:14:0.03:0,0,0	1/1:19,0:18:32.62:686,33,0	1/1:18,12:29:11.86:216,12,0	1/1:10,0:10:23.10:381,23,0
chr10	23840622	.	G	GAAA	5427.52	PASS	AB=0.676;AC=36;AF=0.643;AN=56;BaseQRankSum=-2.575;DP=592;FS=0.000;HRun=12;HaplotypeScore=105.3515;InbreedingCoeff=0.4954;MQ=68.76;MQ0=0;MQRankSum=-1.646;QD=12.06;ReadPosRankSum=-1.554;VQSLOD=2.3762;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:3,0:11:20.52:0,21,122	1/1:3,6:12:12.04:193,12,0	0/0:15,0:13:8.47:0,8,69	0/1:8,0:10:9.19:9,0,33	1/1:10,18:33:58.67:774,59,0	1/1:5,22:36:51.02:713,51,0	1/1:3,11:17:36.04:549,36,0	1/1:12,15:29:62.13:861,62,0	0/1:5,10:16:15.59:257,0,16	0/1:13,0:32:37.83:57,0,38	0/1:6,0:19:16.42:40,0,16	1/1:7,11:18:15.05:263,15,0	1/1:3,12:18:13.25:175,13,0	1/1:4,8:13:15.05:275,15,0	0/0:28,0:30:61.32:0,61,687	0/0:28,0:30:43.16:0,43,640	1/1:6,0:31:16.20:36,16,0	1/1:2,0:10:9.22:37,9,0	0/1:8,0:22:46.65:58,0,47	0/1:12,0:31:63.70:71,0,64	1/1:8,0:16:7.48:17,7,0	1/1:4,13:17:32.51:456,33,0	1/1:9,12:26:20.75:272,21,0	1/1:8,7:17:11.41:123,11,0	1/1:5,18:26:13.27:191,13,0	0/0:4,0:14:32.40:0,32,210	0/0:5,0:34:85.26:0,85,512	0/0:1,0:8:17.63:0,18,106
chr10	23840741	.	G	GTT	10206.31	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-15.459;DP=720;FS=15.689;HRun=7;HaplotypeScore=91.3089;InbreedingCoeff=0.9967;MQ=64.61;MQ0=2;MQRankSum=0.344;QD=34.60;ReadPosRankSum=1.803;VQSLOD=3.5972;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,23:29:41.26:872,41,0	0/0:7,0:7:21.06:0,21,243	0/0:29,0:26:31.45:0,31,534	0/0:13,0:12:24.07:0,24,276	0/0:25,0:25:75.14:0,75,845	0/0:34,0:34:84.20:0,84,949	0/0:16,0:16:39.11:0,39,453	0/0:40,0:40:99:0,110,1248	0/0:26,0:26:69.16:0,69,781	1/1:8,30:38:90.27:1381,90,0	1/1:3,27:30:78.26:1231,78,0	0/0:27,0:27:75.21:0,75,865	0/0:26,0:26:57.11:0,57,640	0/0:17,0:17:45.11:0,45,514	0/0:36,0:36:99:0,102,1164	0/0:31,0:31:90.26:0,90,1047	1/1:1,34:36:69.24:1132,69,0	1/1:3,25:28:48.16:772,48,0	1/1:3,23:26:66.18:999,66,0	1/1:2,27:30:78.12:1129,78,0	1/1:0,8:8:15.05:246,15,0	0/0:20,0:20:54.07:0,54,609	0/0:16,0:16:42.08:0,42,474	0/0:25,0:25:72.21:0,72,837	0/0:36,0:36:99:0,102,1175	1/1:3,22:25:63.20:987,63,0	1/1:3,27:30:60.20:972,60,0	1/1:3,11:14:33.04:485,33,0
chr10	23840952	.	AT	A	12003.37	PASS	AB=0.764;AC=48;AF=0.857;AN=56;BaseQRankSum=0.658;DP=616;FS=4.945;HRun=10;HaplotypeScore=82.3303;InbreedingCoeff=0.6940;MQ=75.27;MQ0=0;MQRankSum=-3.861;QD=21.28;ReadPosRankSum=3.593;VQSLOD=5.7573;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,22:26:44.08:515,44,0	1/1:0,15:15:44.99:391,45,0	0/0:14,0:14:29.34:0,29,251	0/1:14,1:15:19.35:19,0,159	1/1:3,30:33:83.96:729,84,0	1/1:2,24:27:74.02:631,74,0	1/1:3,12:18:42.09:327,42,0	1/1:4,37:42:99:932,110,0	1/1:4,20:24:59.97:521,60,0	1/1:3,26:29:74.93:642,75,0	1/1:1,23:24:65.98:573,66,0	1/1:0,19:20:59.03:501,59,0	1/1:3,27:31:46.84:624,47,0	1/1:1,28:29:77.89:677,78,0	0/0:15,0:15:42.11:0,42,465	0/0:22,0:22:60.15:0,60,656	1/1:0,21:22:59.03:501,59,0	1/1:1,15:16:44.99:391,45,0	1/1:6,18:24:53.96:465,54,0	1/1:2,23:27:70.05:585,70,0	0/1:4,9:13:3.19:204,0,3	1/1:2,18:20:53.98:469,54,0	1/1:3,14:17:38.98:338,39,0	1/1:5,22:27:2.62:481,3,0	1/1:2,16:19:50.03:423,50,0	1/1:0,22:22:65.98:570,66,0	1/1:1,17:18:47.99:417,48,0	1/1:3,3:6:9:78,9,0
chr10	23843253	.	AT	A	9263.17	PASS	AB=0.532;AC=31;AF=0.554;AN=56;BaseQRankSum=6.466;DP=571;FS=1.856;HRun=6;HaplotypeScore=60.9956;InbreedingCoeff=0.9341;MQ=79.75;MQ0=0;MQRankSum=-0.796;QD=27.01;ReadPosRankSum=2.047;VQSLOD=5.3848;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:57.19:0,57,749	1/1:0,10:10:23.72:258,24,0	0/0:18,0:18:48.11:0,48,594	0/0:8,0:8:18.06:0,18,233	1/1:2,31:33:83.85:902,84,0	1/1:0,24:24:69.17:741,69,0	1/1:1,10:11:24.06:258,24,0	1/1:7,26:33:78.19:837,78,0	1/1:0,13:13:39.10:419,39,0	0/0:27,0:27:78.20:0,78,1003	0/0:24,0:24:66.21:0,66,869	1/1:1,16:17:42.11:450,42,0	1/1:2,27:29:75.19:806,75,0	1/1:1,12:13:33.08:355,33,0	0/0:23,0:23:69.21:0,69,893	0/0:33,1:34:61.03:0,61,1122	0/0:20,0:20:57.18:0,57,743	0/0:6,0:6:12.04:0,12,158	0/0:15,0:15:45.15:0,45,588	0/0:19,0:19:51.14:0,51,642	0/0:14,0:14:39.13:0,39,513	1/1:1,26:27:72.18:774,72,0	1/1:2,24:26:66.17:709,66,0	1/1:2,17:19:39.10:419,39,0	1/1:1,21:22:60.15:645,60,0	0/1:3,22:25:6.81:625,0,7	1/1:2,21:23:54.14:580,54,0	1/1:0,18:18:45.11:484,45,0
chr10	23844191	.	C	CAA	17241.26	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-6.178;DP=636;FS=0.545;HRun=10;HaplotypeScore=83.3208;InbreedingCoeff=0.9015;MQ=75.90;MQ0=1;MQRankSum=-3.840;QD=30.79;ReadPosRankSum=0.106;VQSLOD=5.0684;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,11:18:24.97:354,25,0	1/1:1,12:15:38.61:530,39,0	0/0:19,0:21:5.58:0,6,156	0/0:13,0:11:8.97:0,9,86	1/1:5,24:35:86.16:1136,86,0	1/1:4,24:32:71.19:953,71,0	1/1:1,14:16:41.63:591,42,0	1/1:5,21:29:71.20:982,71,0	1/1:3,19:22:54.18:789,54,0	1/1:3,20:27:71.66:958,72,0	1/1:4,14:19:39.09:555,39,0	1/1:0,11:11:24.08:358,24,0	1/1:8,21:32:34.73:847,35,0	1/1:4,22:29:62.18:865,62,0	0/0:16,0:17:38.78:0,39,371	0/0:25,0:25:72.16:0,72,732	1/1:4,18:24:53.53:740,54,0	1/1:2,1:3:3.01:45,3,0	1/1:14,9:24:32.60:456,33,0	1/1:7,24:38:90.18:1125,90,0	1/1:2,13:16:26.58:367,27,0	1/1:1,22:29:82.13:1042,82,0	1/1:7,22:33:67.98:964,68,0	1/1:1,11:12:30.10:447,30,0	1/1:2,18:23:32.67:816,33,0	1/1:3,35:38:99:1434,102,0	1/1:9,13:23:39.53:515,40,0	1/1:1,10:11:27.05:374,27,0
chr10	23844523	.	A	ATCT	3785.78	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=13.520;DP=715;FS=12.247;HRun=0;HaplotypeScore=145.0220;InbreedingCoeff=0.9997;MQ=82.83;MQ0=0;MQRankSum=-13.344;QD=50.48;ReadPosRankSum=2.478;VQSLOD=5.4790;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:87.30:0,87,1520	0/0:15,0:15:42.13:0,42,713	0/0:24,0:23:66.23:0,66,1150	0/0:21,0:21:48.16:0,48,825	0/0:26,0:26:75.26:0,75,1323	0/0:29,0:29:87.27:0,87,1479	0/0:22,0:22:66.23:0,66,1160	0/0:30,0:30:84.29:0,84,1479	0/0:28,0:28:84.29:0,84,1482	0/0:26,0:26:78.27:0,78,1376	0/0:20,0:20:60.21:0,60,1059	0/0:23,0:23:69.24:0,69,1218	0/0:33,0:33:96.33:0,96,1693	0/0:34,0:34:99:0,102,1747	0/0:32,0:32:96.30:0,96,1638	0/0:32,0:32:96.32:0,96,1661	0/0:19,0:19:57.16:0,57,948	0/0:12,0:12:36.08:0,36,601	0/0:23,0:23:63.21:0,63,1088	0/0:32,0:32:96.32:0,96,1661	0/0:33,0:33:93.32:0,93,1621	0/0:21,0:21:60.19:0,60,1030	0/0:27,0:27:81.28:0,81,1429	0/0:18,0:18:51.17:0,51,900	0/0:29,0:29:87.30:0,87,1531	1/1:6,24:30:37.36:1531,37,0	1/1:7,27:34:99:1698,99,0	1/1:3,7:10:30.10:557,30,0
chr10	23844526	.	A	AT	1600.64	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=13.012;DP=710;FS=9.556;HRun=0;HaplotypeScore=117.9592;InbreedingCoeff=0.9991;MQ=82.14;MQ0=0;MQRankSum=-12.050;QD=24.25;ReadPosRankSum=3.469;VQSLOD=4.3574;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:87.29:0,87,1216	0/0:14,0:14:42.14:0,42,587	0/0:24,0:23:69.22:0,69,949	0/0:19,0:19:51.17:0,51,704	0/0:28,0:28:81.26:0,81,1116	0/0:30,0:30:90.30:0,90,1258	0/0:22,0:22:66.22:0,66,923	0/0:31,0:31:93.30:0,93,1283	0/0:29,0:29:84.28:0,84,1175	0/0:27,0:27:81.27:0,81,1133	0/0:21,0:21:60.20:0,60,838	0/0:24,0:24:72.24:0,72,1006	0/0:32,0:32:96.32:0,96,1342	0/0:33,0:33:96.32:0,96,1343	0/0:32,0:32:96.31:0,96,1326	0/0:33,0:33:99:0,99,1367	0/0:20,0:20:60.19:0,60,822	0/0:12,0:12:33.11:0,33,461	0/0:24,0:24:72.23:0,72,986	0/0:31,0:31:93.31:0,93,1301	0/0:30,0:30:87.29:0,87,1217	0/0:23,0:23:66.19:0,66,875	0/0:28,0:28:84.25:0,84,1140	0/0:18,0:18:54.18:0,54,755	0/0:28,0:28:84.26:0,84,1142	1/1:3,24:27:35.19:676,35,0	1/1:4,27:30:89.80:832,90,0	1/1:1,7:8:24.04:236,24,0
chr10	23844653	.	ATT	A	2842.34	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=11.987;DP=531;FS=11.160;HRun=8;HaplotypeScore=61.8182;InbreedingCoeff=0.9886;MQ=77.97;MQ0=2;MQRankSum=-0.218;QD=27.33;ReadPosRankSum=0.213;VQSLOD=2.0813;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:39.08:0,39,600	0/0:8,0:8:18.06:0,18,304	0/0:16,0:16:42.13:0,42,661	0/0:12,0:12:27.08:0,27,417	0/0:35,0:35:99:0,102,1649	0/0:33,0:33:96.28:0,96,1543	0/0:17,0:18:53.64:0,54,821	0/0:32,0:32:87.25:0,87,1330	0/0:24,0:24:72.17:0,72,1129	1/1:2,29:30:84.20:974,84,0	1/1:2,14:16:39.03:450,39,0	0/0:21,0:21:63.22:0,63,1061	0/0:20,0:20:51.17:0,51,863	0/0:18,0:18:51.12:0,51,808	0/0:28,0:28:81.27:0,81,1344	0/0:20,0:19:60.20:0,60,988	1/1:2,11:13:33.10:400,33,0	1/1:5,6:11:15.03:183,15,0	1/1:1,12:13:36.02:376,36,0	1/1:0,16:15:42.13:510,42,0	1/1:0,4:4:12.04:146,12,0	0/0:22,0:22:54.18:0,54,872	0/0:22,0:22:63.21:0,63,1041	0/0:9,0:9:27.09:0,27,454	0/0:18,0:18:48.16:0,48,812	0/0:20,1:21:20.58:0,21,805	0/0:25,0:25:75.22:0,75,1189	0/0:11,0:11:30.10:0,30,507
chr10	23844972	.	GATATATATATATATATATATATATATATATAT	G	97.54	PASS	AB=0.706;AC=3;AF=0.136;AN=22;BaseQRankSum=2.718;DP=158;FS=0.000;HRun=0;HaplotypeScore=102.2715;InbreedingCoeff=0.1847;MQ=87.09;MQ0=5;MQRankSum=-2.383;QD=4.43;ReadPosRankSum=1.882;VQSLOD=1.3461;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	0/0:18,0:9:6.02:0,6,130	0/0:7,0:7:9.03:0,9,115	./.	0/0:5,0:5:5.99:0,6,48	0/0:14,0:14:12.03:0,12,188	./.	./.	./.	./.	0/0:3,0:3:3.01:0,3,48	./.	./.	./.	0/0:11,0:10:9.03:0,9,972	./.	./.	./.	0/0:2,0:2:3.01:0,3,38	./.	0/0:4,0:4:3:0,3,25	./.	./.	0/0:8,0:8:12.04:0,12,212	1/1:6,0:9:6.02:125,6,0	0/1:7,0:11:32.42:56,0,32
chr10	23845019	.	AT	A	152.68	PASS	AC=8;AF=0.200;AN=40;BaseQRankSum=1.776;DP=108;FS=1.957;HRun=2;HaplotypeScore=18.5945;InbreedingCoeff=0.5608;MQ=64.82;MQ0=6;MQRankSum=0.822;QD=8.98;ReadPosRankSum=-0.680;VQSLOD=0.9121;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:11.96:0,12,120	0/0:2,0:2:5.99:0,6,62	0/0:6,0:3:6.02:0,6,80	0/0:12,0:2:3.01:0,3,45	0/0:3,0:2:9.03:0,9,119	./.	0/0:1,0:1:3.01:0,3,40	0/0:7,0:7:21.07:0,21,279	0/0:2,0:2:6.01:0,6,65	1/1:0,2:2:6.02:76,6,0	./.	./.	0/0:4,0:4:12.04:0,12,159	0/0:6,0:6:18.05:0,18,224	./.	0/0:1,0:1:3.01:0,3,40	1/1:11,0:7:5.23:44,5,0	./.	1/1:2,0:2:6.02:75,6,0	1/1:0,2:2:6.02:76,6,0	./.	0/0:3,0:3:9.02:0,9,104	./.	0/0:1,0:1:3.01:0,3,40	./.	0/0:6,0:6:18.06:0,18,239	0/0:10,0:10:22.44:0,22,217	0/0:9,0:9:14.26:0,14,166
chr10	23845020	.	T	TA	191.85	PASS	AC=8;AF=0.200;AN=40;BaseQRankSum=2.486;DP=111;FS=1.835;HRun=1;HaplotypeScore=18.4599;InbreedingCoeff=0.5737;MQ=68.63;MQ0=6;MQRankSum=0.509;QD=11.29;ReadPosRankSum=-0.809;VQSLOD=1.3493;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:11.96:0,12,121	0/0:2,0:2:5.99:0,6,62	0/0:7,0:4:8.05:0,8,84	0/0:12,0:2:3:0,3,29	0/0:3,0:2:9.03:0,9,120	./.	0/0:1,0:1:3.01:0,3,40	0/0:7,0:7:21.07:0,21,280	0/0:2,0:2:6.01:0,6,65	1/1:3,0:3:6.02:76,6,0	./.	./.	0/0:4,0:4:12.04:0,12,160	0/0:6,0:6:18.05:0,18,225	./.	0/0:1,0:1:3.01:0,3,40	1/1:1,9:6:6.02:84,6,0	./.	1/1:2,0:2:6.02:75,6,0	1/1:2,0:2:6.02:76,6,0	./.	0/0:3,0:3:9.02:0,9,105	./.	0/0:1,0:1:3.01:0,3,40	./.	0/0:7,0:7:18.06:0,18,240	0/0:10,0:10:23.96:0,24,246	0/0:9,0:9:15.02:0,15,181
chr10	23848226	.	TTAG	T	5102.93	PASS	AB=1.000;AC=39;AF=0.750;AN=52;BaseQRankSum=5.171;DP=657;FS=29.413;HRun=0;HaplotypeScore=114.6526;InbreedingCoeff=0.6018;MQ=62.02;MQ0=9;MQRankSum=3.082;QD=10.74;ReadPosRankSum=1.230;VQSLOD=2.3602;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:32,0:31:38.16:472,38,0	1/1:10,5:15:9.03:121,9,0	0/0:38,0:30:3.48:0,3,49	0/0:38,0:25:10.18:0,10,69	1/1:11,12:23:23.37:263,23,0	1/1:9,11:20:12.04:161,12,0	1/1:16,0:16:11.70:145,12,0	1/1:22,0:17:9.02:101,9,0	1/1:11,17:28:20.90:278,21,0	0/1:27,0:27:8.01:18,0,8	0/1:18,0:18:0.01:0,0,0	1/1:19,10:29:54.09:670,54,0	1/1:20,17:37:27.06:348,27,0	1/1:10,16:26:9.03:121,9,0	0/0:32,0:32:57.29:0,57,999	0/0:26,1:27:22.93:0,23,1026	./.	1/1:10,0:10:3:27,3,0	0/1:14,0:11:24.20:26,0,24	0/0:27,0:27:0.47:0,0,1	./.	1/1:11,13:23:21:261,21,0	1/1:1,10:11:21.07:282,21,0	1/1:19,4:23:29.13:399,29,0	1/1:10,10:20:21.54:283,22,0	1/1:12,16:28:47.62:578,48,0	1/1:19,13:32:18.05:228,18,0	1/1:9,11:20:24.08:322,24,0
chr10	23848230	.	T	TAGG	1356.97	PASS	AB=0.646;AC=11;AF=0.196;AN=56;BaseQRankSum=5.869;DP=638;FS=3.032;HRun=0;HaplotypeScore=132.6848;InbreedingCoeff=0.7933;MQ=60.02;MQ0=9;MQRankSum=-3.376;QD=11.60;ReadPosRankSum=-1.606;VQSLOD=3.0291;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:31,0:30:53.06:380,53,0	0/0:15,0:15:27.80:0,28,261	0/0:36,0:27:59.58:0,60,686	0/0:40,0:26:53.62:0,54,566	0/0:23,0:23:51.23:0,51,411	0/0:17,0:17:26.97:0,27,234	0/0:19,0:19:44.79:0,45,383	0/0:21,0:16:42.13:0,42,360	0/0:27,0:27:44.92:0,45,382	1/1:3,22:25:47.78:524,48,0	0/1:0,19:19:0.03:0,0,0	0/0:29,0:29:86.69:0,87,763	0/0:36,0:36:74.90:0,75,644	0/0:25,0:25:32.77:0,33,276	0/0:32,0:32:91.84:0,92,1181	0/0:27,0:27:81.16:0,81,1138	1/1:7,0:7:11.80:77,12,0	1/1:8,0:8:23.88:201,24,0	0/1:14,3:13:6.47:333,0,6	0/0:5,20:25:0.47:0,0,2	0/1:3,7:10:0:0,0,0	0/0:21,0:20:32.92:0,33,288	0/0:12,0:12:24.02:0,24,225	0/0:22,0:22:49:0,49,418	0/0:16,0:16:36.48:0,36,326	0/0:27,1:28:14.03:0,14,537	0/0:31,0:31:62.63:0,63,507	0/0:19,0:19:47.98:0,48,421
chr10	23848232	.	GTA	G	190.58	PASS	AB=0.942;AC=4;AF=0.071;AN=56;BaseQRankSum=10.038;DP=631;FS=9.675;HRun=0;HaplotypeScore=121.2162;InbreedingCoeff=0.1855;MQ=58.74;MQ0=9;MQRankSum=2.999;QD=2.65;ReadPosRankSum=7.452;VQSLOD=0.7705;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:20,9:29:96.57:248,0,97	0/0:14,0:14:24.56:0,25,345	0/0:37,0:26:76.12:0,76,973	0/0:40,0:26:74.80:0,75,964	0/0:23,0:23:34.77:0,35,427	0/0:16,0:16:11.77:0,12,189	0/0:19,0:19:42.60:0,43,502	0/0:21,0:16:43.28:0,43,521	0/0:26,0:26:19.70:0,20,305	0/0:23,0:23:45:0,45,305	0/1:18,0:18:0.03:0,0,0	0/0:31,0:31:35.52:0,36,440	0/0:37,0:37:29.71:0,30,596	0/0:25,0:25:21.25:0,21,307	0/0:32,0:32:96.32:0,96,1660	0/0:27,0:27:77.43:0,77,1433	0/0:7,0:7:8.89:0,9,64	0/0:9,0:9:3.29:0,3,103	0/1:17,0:13:29.98:30,0,180	0/0:20,0:20:3.85:0,4,11	0/1:7,0:7:0:0,0,0	0/0:20,0:19:10.06:0,10,167	0/0:13,0:13:3.26:0,3,93	0/0:22,0:22:14.66:0,15,238	0/0:16,0:16:12.28:0,12,192	0/0:28,0:28:36.90:0,37,483	0/0:33,0:33:35.94:0,36,628	0/0:19,0:19:17.44:0,17,300
chr10	23848323	.	TAGG	T	457.08	PASS	AB=0.896;AC=11;AF=0.196;AN=56;BaseQRankSum=5.488;DP=687;FS=1.266;HRun=0;HaplotypeScore=211.0680;InbreedingCoeff=0.5644;MQ=54.71;MQ0=5;MQRankSum=-3.620;QD=4.71;ReadPosRankSum=1.120;VQSLOD=2.2234;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:19:17.68:64,18,0	0/0:14,0:14:27.06:0,27,336	0/0:38,0:25:74.48:0,74,1345	0/0:35,0:23:59.14:0,59,996	0/0:26,0:26:52.03:0,52,889	0/0:38,0:38:78.10:0,78,1517	0/0:20,0:20:46.58:0,47,659	0/0:44,0:43:99:0,103,1386	0/0:30,0:30:66.36:0,66,1071	0/1:25,3:28:99:200,0,191	1/1:6,0:6:5.38:45,5,0	0/0:36,0:36:87.77:0,88,1681	0/0:36,0:36:67.52:0,68,1204	0/0:38,0:38:72.23:0,72,1273	0/0:37,0:37:99:0,111,2450	0/0:28,0:28:81.24:0,81,1658	0/1:6,1:7:32.38:32,0,35	0/1:9,1:10:38.43:38,0,84	1/1:7,1:5:5.52:62,6,0	1/1:18,1:19:19.88:174,20,0	0/0:9,0:9:2.28:0,2,13	0/0:16,0:16:34.44:0,34,537	0/0:22,0:22:37.88:0,38,621	0/0:20,0:20:23.90:0,24,545	0/0:16,0:16:44.94:0,45,695	0/0:36,0:36:78.72:0,79,1525	0/0:34,0:34:57:0,57,785	0/0:17,0:17:26.82:0,27,595
chr10	23848329	.	TAGG	T	2420	PASS	AB=0.998;AC=26;AF=0.464;AN=56;BaseQRankSum=-3.862;DP=690;FS=4.897;HRun=0;HaplotypeScore=203.0681;InbreedingCoeff=-0.3388;MQ=54.69;MQ0=4;MQRankSum=2.250;QD=4.64;ReadPosRankSum=-7.217;VQSLOD=0.0646;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:0,20:20:39.13:662,39,0	0/1:13,0:13:43.99:87,0,44	0/0:41,0:30:29.83:0,30,844	0/0:32,0:23:27.26:0,27,506	0/1:25,0:25:25.62:26,0,268	0/1:40,0:40:46.28:46,0,353	0/1:18,0:18:91.49:91,0,145	0/1:47,0:46:99:326,0,224	0/1:33,0:33:89.72:90,0,257	0/1:27,0:27:80.67:292,0,81	1/1:6,0:6:5.38:45,5,0	0/1:32,1:33:68.07:68,0,384	0/1:38,0:38:99:171,0,226	0/1:37,0:37:22.77:23,0,299	0/0:40,0:40:99:0,120,2418	0/0:27,0:27:81.13:0,81,1637	0/1:7,0:7:15.57:32,0,16	0/1:10,0:10:36.47:39,0,36	1/1:5,0:3:3.01:37,3,0	1/1:19,0:19:19.89:171,20,0	0/0:9,0:9:2.27:0,2,13	0/1:15,0:15:71.41:71,0,120	0/1:23,0:23:64.25:64,0,113	0/1:22,0:22:3.78:4,0,136	0/1:16,0:16:35.60:36,0,176	0/1:34,0:34:65.32:65,0,331	0/1:34,0:34:99:142,0,172	0/0:19,0:19:26.39:0,26,179
chr10	23848386	.	GAGT	G	70.61	PASS	AB=0.962;AC=7;AF=0.125;AN=56;BaseQRankSum=7.136;DP=623;FS=3.943;HRun=0;HaplotypeScore=183.8622;InbreedingCoeff=0.1955;MQ=51.18;MQ0=5;MQRankSum=-5.166;QD=0.94;ReadPosRankSum=3.200;VQSLOD=2.5887;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:28.54:0,29,341	0/0:11,0:11:2.78:0,3,25	0/0:33,0:23:48.21:0,48,769	0/0:37,0:22:36.27:0,36,1003	0/0:28,0:28:27.78:0,28,333	0/0:26,0:26:14.97:0,15,129	0/0:21,0:21:15.76:0,16,175	0/0:30,0:26:74.89:0,75,851	0/0:29,0:29:12.97:0,13,130	1/1:14,0:17:6.32:97,6,0	0/1:1,0:2:0:0,0,0	0/0:38,0:38:71.45:0,71,629	0/0:34,0:34:13.99:0,14,157	0/0:32,0:32:14.08:0,14,150	0/0:40,0:40:99:0,117,2383	0/0:34,0:34:93.32:0,93,1932	0/1:8,1:9:5.18:5,0,6	0/1:8,1:10:17.54:60,0,18	0/1:9,0:7:2.82:3,0,27	0/0:7,0:7:6.96:0,7,49	0/0:6,4:10:2.96:0,3,25	0/0:10,0:10:3.79:0,4,56	0/0:15,0:15:2.90:0,3,39	0/0:21,0:21:24.33:0,24,269	0/0:13,0:13:6.26:0,6,64	0/0:38,0:38:53.24:0,53,576	0/1:28,0:28:13.29:13,0,67	0/0:18,0:18:8.67:0,9,87
chr10	23848389	.	TAGTAGG	T	4843.38	PASS	AB=0.972;AC=27;AF=0.500;AN=54;BaseQRankSum=9.030;DP=615;FS=11.745;HRun=0;HaplotypeScore=180.9722;InbreedingCoeff=-0.2390;MQ=51.24;MQ0=7;MQRankSum=-5.636;QD=10.58;ReadPosRankSum=2.924;VQSLOD=3.1732;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:21,0:21:13.53:14,0,111	1/1:11,0:11:4.26:54,4,0	0/0:36,0:22:43.72:0,44,586	0/0:36,0:21:42.05:0,42,1090	0/1:25,0:25:94.05:94,0,103	0/1:25,0:25:23.86:225,0,24	0/1:19,0:19:51.93:94,0,52	0/1:31,0:26:99:310,0,103	0/1:29,0:29:24.89:254,0,25	1/1:6,9:15:42.02:708,42,0	./.	1/1:36,0:36:17.10:956,17,0	0/1:35,0:35:38.79:318,0,39	0/1:33,0:33:9.79:282,0,10	0/0:41,0:41:99:0,114,3124	0/0:32,0:32:96.30:0,96,2558	1/1:7,2:9:6.53:149,7,0	0/1:4,6:10:34.34:113,0,34	0/1:8,1:7:2.11:190,0,2	1/1:6,4:10:20.32:190,20,0	0/0:5,4:9:2.04:0,2,7	0/1:13,0:13:15.97:86,0,16	0/1:15,0:15:13.97:45,0,14	0/1:21,0:21:24.93:194,0,25	0/1:13,0:13:9.96:151,0,10	0/1:33,0:33:99:321,0,148	0/1:28,0:28:12.96:93,0,13	0/1:17,0:17:2.38:2,0,17
chr10	23848395	.	GAGTAGT	G	7098.33	PASS	AB=0.919;AC=40;AF=0.714;AN=56;BaseQRankSum=10.127;DP=614;FS=0.000;HRun=0;HaplotypeScore=162.5505;InbreedingCoeff=0.3904;MQ=51.49;MQ0=8;MQRankSum=-4.522;QD=15.53;ReadPosRankSum=3.646;VQSLOD=4.1434;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:22:11.03:11,0,122	1/1:0,10:10:5.91:85,6,0	0/0:33,0:14:27.35:0,27,350	0/0:34,0:20:44.18:0,44,767	1/1:2,20:22:14.94:205,15,0	1/1:1,22:23:21:374,21,0	1/1:3,20:23:9.03:171,9,0	1/1:8,23:26:57.11:843,57,0	1/1:2,29:31:18.06:394,18,0	1/1:17,0:17:15.01:402,15,0	0/1:2,0:2:0:0,0,0	1/1:18,15:33:74.06:1657,74,0	1/1:4,28:32:26.98:514,27,0	1/1:2,32:34:21.02:432,21,0	0/0:45,0:45:99:0,129,3056	0/0:36,0:36:99:0,99,2343	1/1:8,0:8:9.01:95,9,0	0/1:9,0:9:65.86:74,0,66	0/1:10,0:8:39.78:83,0,40	0/1:14,0:14:38.92:54,0,39	0/0:9,0:9:0:0,0,0	1/1:2,11:13:6.02:129,6,0	1/1:1,13:14:3.01:69,3,0	1/1:17,4:21:24.08:423,24,0	1/1:2,11:13:11.40:201,11,0	0/1:2,0:32:31.84:705,0,32	1/1:3,0:28:11.16:167,11,0	1/1:1,0:15:2.63:13,3,0
chr10	23848404	.	TAGG	T	2502.43	PASS	AB=0.974;AC=29;AF=0.537;AN=54;BaseQRankSum=12.221;DP=628;FS=0.000;HRun=0;HaplotypeScore=152.8747;InbreedingCoeff=-0.1672;MQ=51.18;MQ0=15;MQRankSum=-4.024;QD=5.32;ReadPosRankSum=5.414;VQSLOD=2.3605;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:27:65.05:65,0,110	1/1:10,0:10:2.74:12,3,0	0/0:29,0:11:16.33:0,16,137	0/0:35,0:18:41.67:0,42,348	0/1:22,0:22:6.88:7,0,41	0/1:24,0:24:38.50:39,0,47	1/1:20,0:20:0.61:6,1,0	0/1:29,0:23:30.04:317,0,30	0/1:31,0:31:26.98:27,0,32	1/1:19,1:21:45.19:453,45,0	./.	0/1:34,0:34:67.30:323,0,67	0/1:33,0:32:25.35:25,0,78	0/1:34,1:35:10.71:94,0,11	0/0:45,0:45:99:0,118,2173	0/0:33,0:33:96.15:0,96,1592	1/1:6,1:7:9.19:97,9,0	0/1:11,0:9:29.99:30,0,32	0/1:5,7:10:5.62:241,0,6	1/1:17,0:16:32.13:433,32,0	1/1:13,0:12:2.99:24,3,0	1/1:13,0:13:8.68:56,9,0	0/1:14,0:14:6.02:6,0,18	0/1:20,0:20:6.70:129,0,7	0/1:16,0:16:22.76:23,0,55	0/1:32,0:32:99:216,0,286	0/1:29,0:29:11.89:44,0,12	0/0:14,0:14:3:0,3,28
chr10	23848407	.	GAGTAGT	G	2607.62	PASS	AB=0.995;AC=27;AF=0.500;AN=54;BaseQRankSum=10.166;DP=635;FS=1.663;HRun=0;HaplotypeScore=172.9849;InbreedingCoeff=-0.1793;MQ=51.10;MQ0=15;MQRankSum=-8.029;QD=5.82;ReadPosRankSum=4.993;VQSLOD=2.6258;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:14.46:0,14,597	1/1:10,0:10:2.79:33,3,0	0/1:30,0:11:0.83:1,0,24	0/0:34,0:16:2.94:0,3,18	0/1:22,0:22:47.48:58,0,47	0/1:24,0:24:90.11:114,0,90	0/1:22,0:22:29.07:48,0,29	0/0:33,0:27:27.02:0,27,381	0/1:31,0:31:74.92:146,0,75	1/1:16,6:22:38.44:537,38,0	./.	0/1:35,0:35:85.06:424,0,85	0/1:33,0:32:99:174,0,125	0/1:35,0:35:75.53:172,0,76	0/0:44,0:45:96.23:0,96,2720	0/0:33,0:33:66.20:0,66,1873	1/1:6,1:7:5.99:62,6,0	0/1:11,1:10:45.82:103,0,46	1/1:12,1:10:4.79:164,5,0	1/1:15,2:16:38.60:338,39,0	1/1:13,0:12:2.80:49,3,0	0/1:13,0:13:0.58:76,0,1	0/1:14,0:14:24.97:25,0,64	0/1:20,0:20:41.09:41,0,60	0/1:16,0:16:67.72:68,0,128	0/1:31,0:31:77.47:77,0,315	0/1:28,0:28:36.48:59,0,36	0/0:13,0:13:2.94:0,3,18
chr10	23849927	.	TAAA	T	4068.88	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=12.538;DP=567;FS=0.000;HRun=13;HaplotypeScore=100.6501;InbreedingCoeff=0.9934;MQ=69.13;MQ0=0;MQRankSum=-1.736;QD=28.45;ReadPosRankSum=2.896;VQSLOD=3.1025;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:3,0:17:32.89:0,33,255	0/0:6,0:7:18.06:0,18,305	0/0:19,0:12:27.05:0,27,379	0/0:14,0:12:18.04:0,18,244	0/0:32,0:36:99:0,99,1658	0/0:18,0:21:54.08:0,54,822	0/0:18,0:18:45.14:0,45,819	0/0:36,0:37:84.27:0,84,1454	0/0:19,0:20:45.07:0,45,798	1/1:3,20:24:63.11:748,63,0	1/1:4,24:28:63.10:762,63,0	0/0:19,1:24:29.69:0,30,1028	0/0:20,0:23:51.17:0,51,933	0/0:18,0:19:57.16:0,57,963	0/0:8,0:16:36.40:0,36,327	0/0:3,0:15:36.76:0,37,279	1/1:5,21:26:63.02:728,63,0	1/1:3,6:9:18.04:219,18,0	1/1:4,13:17:40.91:479,41,0	1/1:1,27:29:78.07:914,78,0	1/1:1,9:10:18:219,18,0	0/0:17,0:21:63.15:0,63,1066	0/0:17,0:21:42.10:0,42,732	0/0:14,0:14:33.58:0,34,635	0/0:20,0:23:57.15:0,57,996	0/0:2,0:18:46.59:0,47,371	0/0:6,0:27:56.81:0,57,471	0/0:4,0:14:25.15:0,25,185
chr10	23850312	.	T	TC	5252.08	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=10.879;DP=657;FS=9.973;HRun=2;HaplotypeScore=74.2877;InbreedingCoeff=0.9977;MQ=79.20;MQ0=1;MQRankSum=-2.270;QD=35.01;ReadPosRankSum=1.104;VQSLOD=4.7194;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:57.02:0,57,656	0/0:11,0:11:30.09:0,30,369	0/0:21,0:20:53.86:0,54,488	0/0:25,1:25:28.39:0,28,427	0/0:35,0:35:99:0,102,1198	0/0:34,0:34:95.07:0,95,1139	0/0:19,0:19:54.17:0,54,663	0/0:23,0:23:57.34:0,57,739	0/0:14,0:14:42.11:0,42,493	1/1:1,30:32:90.25:1172,90,0	1/1:4,16:20:51.91:692,52,0	0/0:16,0:16:48.12:0,48,567	0/0:26,0:26:75.22:0,75,910	0/0:23,0:23:59.79:0,60,734	0/0:40,0:40:99:0,111,1318	0/0:24,0:24:69.21:0,69,839	1/1:2,19:21:30.45:669,30,0	1/1:0,8:8:18.06:241,18,0	1/1:1,22:23:63.15:818,63,0	1/1:0,33:33:96.22:1253,96,0	1/1:0,13:13:30.10:407,30,0	0/0:25,0:25:69.19:0,69,823	0/0:27,0:27:78.21:0,78,925	0/0:24,0:24:69.11:0,69,780	0/0:21,0:21:63.19:0,63,765	0/0:31,1:32:52.48:0,52,1035	0/0:36,0:36:99:0,102,1184	0/0:8,0:8:24.08:0,24,296
chr10	23850635	.	G	GT	3909.18	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-11.940;DP=592;FS=15.980;HRun=7;HaplotypeScore=55.5480;InbreedingCoeff=0.9993;MQ=82.33;MQ0=1;MQRankSum=-1.176;QD=32.31;ReadPosRankSum=-0.412;VQSLOD=1.8929;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:54.07:0,54,512	0/0:13,0:13:33.05:0,33,319	0/0:16,0:16:35.91:0,36,310	0/0:18,0:18:30.86:0,31,299	0/0:37,0:37:99:0,105,981	0/0:28,0:28:72.09:0,72,688	0/0:9,0:9:24.04:0,24,231	0/0:38,0:38:93.12:0,93,888	0/0:20,0:20:54.09:0,54,520	1/1:0,14:14:42.09:472,42,0	1/1:1,19:20:57.08:658,57,0	0/0:13,0:13:36.06:0,36,348	0/0:24,0:24:60.07:0,60,573	0/0:13,0:13:39.05:0,39,370	0/0:18,0:18:51.07:0,51,488	0/0:22,0:23:62.09:0,62,571	1/1:0,12:12:36.11:435,36,0	1/1:2,13:15:30.09:362,30,0	1/1:1,16:17:48.14:570,48,0	1/1:1,27:28:81.15:945,81,0	1/1:1,14:15:39.12:468,39,0	0/0:27,0:27:69.06:0,69,652	0/0:27,0:27:69.11:0,69,666	0/0:15,0:14:42.07:0,42,405	0/0:35,0:35:84.10:0,84,804	0/0:28,0:28:75.09:0,75,715	0/0:27,0:26:78.11:0,78,747	0/0:23,0:23:63.10:0,63,608
chr10	23851345	.	G	GA	6702.96	PASS	AB=0.628;AC=35;AF=0.625;AN=56;BaseQRankSum=-5.043;DP=582;FS=0.431;HRun=12;HaplotypeScore=73.8662;InbreedingCoeff=-0.0327;MQ=75.69;MQ0=0;MQRankSum=-0.318;QD=13.33;ReadPosRankSum=-0.423;VQSLOD=4.8958;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,3:24:3.42:202,3,0	0/1:5,5:10:6.88:102,0,7	0/0:14,0:16:13.32:0,13,81	0/0:7,0:7:5.63:0,6,26	1/1:8,17:26:13.90:266,14,0	1/1:4,18:23:31.21:484,31,0	1/1:2,14:16:1.26:336,1,0	0/1:10,16:27:4.21:400,0,4	0/1:3,12:16:7.72:126,0,8	1/1:3,10:14:26.86:240,27,0	1/1:12,18:31:28.04:430,28,0	1/1:13,25:38:0.32:478,0,0	0/1:9,15:24:23.56:269,0,24	0/1:11,15:26:11.76:357,0,12	0/0:26,0:28:54.63:0,55,384	0/0:25,0:26:55.60:0,56,398	0/1:4,10:14:0.87:154,0,1	0/1:6,3:9:43.46:43,0,51	1/1:7,10:17:8.04:210,8,0	0/1:8,26:34:19.02:621,0,19	1/1:5,8:15:22.20:195,22,0	1/1:2,16:19:16.27:342,16,0	0/1:11,15:26:22.37:254,0,22	0/1:6,13:19:4.75:282,0,5	0/1:6,13:21:24.69:284,0,25	0/1:11,10:23:18.47:219,0,18	1/1:6,17:24:1.09:316,1,0	0/1:3,4:7:6.92:93,0,7
chr10	23855567	.	A	AG	5060.27	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-5.995;DP=686;FS=4.999;HRun=5;HaplotypeScore=98.2703;InbreedingCoeff=0.9764;MQ=84.33;MQ0=1;MQRankSum=-5.237;QD=33.07;ReadPosRankSum=0.498;VQSLOD=4.6319;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,18:26:54.18:710,54,0	0/0:13,0:13:30.07:0,30,322	0/0:32,0:31:46.17:0,46,726	0/0:44,0:40:74.60:0,75,734	0/0:32,0:32:87.20:0,87,926	0/0:25,0:25:69.17:0,69,740	0/0:23,0:23:63.16:0,63,677	0/0:31,0:31:84.20:0,84,896	0/0:23,0:23:60.11:0,60,628	1/1:2,17:19:51.17:669,51,0	1/1:4,10:14:33.09:416,33,0	0/0:13,0:13:27.05:0,27,290	0/0:40,0:40:99:0,120,1289	0/0:19,0:19:48.06:0,48,495	0/0:23,0:23:69.17:0,69,742	0/0:27,0:27:81.20:0,81,871	1/1:5,19:24:63.16:808,63,0	1/1:3,5:8:15.05:197,15,0	1/1:2,12:14:39.12:500,39,0	1/1:3,28:31:87.27:1128,87,0	1/1:1,16:17:48.16:631,48,0	0/0:16,0:16:45.11:0,45,483	0/0:25,0:25:69.17:0,69,741	0/0:38,0:38:99:0,105,1116	0/0:40,0:40:99:0,114,1217	0/0:28,2:30:5.25:0,5,759	0/0:30,0:30:81.15:0,81,851	0/0:7,0:7:21.05:0,21,226
chr10	23855618	.	AT	A	11406.77	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=8.138;DP=544;FS=3.291;HRun=8;HaplotypeScore=67.9382;InbreedingCoeff=0.9776;MQ=74.42;MQ0=1;MQRankSum=-2.645;QD=24.17;ReadPosRankSum=1.468;VQSLOD=5.7548;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,13:16:39.04:371,39,0	1/1:1,7:8:15.02:145,15,0	0/0:10,0:9:12:0,12,130	0/0:14,1:16:19.40:0,19,198	1/1:0,27:27:78.13:753,78,0	1/1:2,23:25:66.10:637,66,0	1/1:4,10:14:24.04:232,24,0	1/1:4,29:33:87.10:831,87,0	1/1:2,19:21:51.08:493,51,0	1/1:0,21:21:63.09:602,63,0	1/1:1,14:15:36.05:348,36,0	1/1:1,15:16:38.93:376,39,0	1/1:5,23:28:60.09:579,60,0	1/1:2,18:20:48.07:463,48,0	0/0:22,0:22:63.18:0,63,750	0/0:23,1:24:37.21:0,37,721	1/1:4,16:20:51.03:483,51,0	1/1:1,5:6:15.02:145,15,0	1/1:4,12:16:39.05:372,39,0	1/1:0,23:23:69.11:666,69,0	1/1:0,8:8:18.02:174,18,0	1/1:1,16:17:48.08:464,48,0	1/1:0,21:21:51.04:492,51,0	1/1:5,16:21:32.91:319,33,0	1/1:3,28:31:81.13:782,81,0	1/1:2,24:26:72.11:695,72,0	1/1:3,25:28:72.11:695,72,0	1/1:1,10:11:30.05:290,30,0
chr10	23856096	.	C	CA	2756.87	PASS	AB=0.933;AC=33;AF=0.589;AN=56;BaseQRankSum=2.037;DP=390;FS=1.598;HRun=1;HaplotypeScore=92.7486;InbreedingCoeff=0.8084;MQ=72.81;MQ0=2;MQRankSum=-4.880;QD=13.72;ReadPosRankSum=-1.067;VQSLOD=2.5338;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:48.05:0,48,599	1/1:0,3:3:5.75:47,6,0	0/0:22,0:14:33.21:0,33,369	0/0:31,0:20:44.60:0,45,435	1/1:12,7:19:30.91:304,31,0	1/1:10,6:16:29:300,29,0	1/1:8,3:11:17.80:191,18,0	1/1:17,7:24:35.42:395,35,0	1/1:3,2:5:3.90:38,4,0	0/0:11,0:11:26.88:0,27,239	0/0:15,0:15:27.01:0,27,250	1/1:6,3:9:11.90:126,12,0	1/1:12,4:16:21.40:194,21,0	1/1:4,0:4:7.35:59,7,0	0/0:23,0:22:60.19:0,60,777	0/0:22,0:22:63.20:0,63,816	0/0:10,0:10:28.83:0,29,252	0/0:3,0:3:6:0,6,55	0/1:13,1:13:8.64:9,0,264	0/0:25,0:25:44.70:0,45,407	0/0:4,0:4:3:0,3,25	1/1:5,8:13:27.86:284,28,0	1/1:16,9:24:31.10:312,31,0	1/1:4,1:5:12:126,12,0	1/1:6,5:11:3.97:151,4,0	1/1:9,2:11:18.39:174,18,0	1/1:9,0:8:11.39:120,11,0	1/1:4,1:5:14.97:139,15,0
chr10	23856097	.	AC	A	2463.61	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=0.063;DP=393;FS=8.348;HRun=1;HaplotypeScore=95.6265;InbreedingCoeff=0.9170;MQ=71.70;MQ0=2;MQRankSum=-2.348;QD=13.32;ReadPosRankSum=-3.678;VQSLOD=0.9549;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:48.13:0,48,675	1/1:5,0:4:7.45:43,7,0	0/0:22,0:14:24.10:0,24,391	0/0:29,0:19:35.41:0,35,399	1/1:16,3:19:38.08:258,38,0	1/1:13,3:16:35.78:238,36,0	1/1:10,0:10:26.51:189,27,0	1/1:21,2:23:58.85:433,59,0	1/1:4,0:4:8.50:63,8,0	0/0:11,0:11:26.07:0,26,238	0/0:15,0:15:23.10:0,23,91	1/1:10,0:10:26.83:216,27,0	1/1:15,1:16:28.43:178,28,0	1/1:4,0:4:11.97:96,12,0	0/0:25,0:24:60.18:0,60,867	0/0:24,0:24:63.18:0,63,891	0/0:10,0:10:28.46:0,28,183	0/0:3,0:3:5.91:0,6,38	0/0:14,0:13:33.13:0,33,232	0/0:27,0:27:40.26:0,40,222	0/0:3,0:3:2.92:0,3,17	1/1:12,1:13:29.69:164,30,0	1/1:24,1:24:41.93:291,42,0	1/1:5,1:6:8.28:56,8,0	1/1:9,1:10:12.13:72,12,0	1/1:8,2:10:22.54:168,23,0	1/1:8,1:8:17.69:119,18,0	1/1:3,2:5:14.45:100,14,0
chr10	23856098	.	CAAAAAA	C	1855.56	PASS	AB=0.750;AC=13;AF=0.232;AN=56;BaseQRankSum=0.460;DP=467;FS=1.221;HRun=7;HaplotypeScore=158.4003;InbreedingCoeff=0.8210;MQ=66.68;MQ0=3;MQRankSum=-2.058;QD=21.58;ReadPosRankSum=4.045;VQSLOD=-0.1992;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:60.20:0,60,1764	0/0:5,0:4:12.04:0,12,265	0/0:23,0:14:36.11:0,36,777	0/0:30,0:19:31.12:0,31,780	0/0:28,0:28:43.96:0,44,631	0/0:20,0:20:52.31:0,52,759	0/0:12,0:12:18.02:0,18,246	0/0:32,0:32:83.20:0,83,1045	0/0:7,0:7:15.02:0,15,200	1/1:8,3:11:11.55:219,12,0	1/1:4,10:15:27.09:430,27,0	0/0:16,0:16:45.11:0,45,592	0/0:22,0:22:51.05:0,51,630	0/0:7,0:7:17.97:0,18,244	0/0:27,0:26:78.27:0,78,2456	0/0:24,0:24:69.22:0,69,2097	1/1:7,3:10:29.69:310,30,0	1/1:3,0:3:6:64,6,0	0/1:10,5:13:53.01:318,0,53	1/1:17,12:29:44.94:673,45,0	1/1:0,0:3:2.96:19,3,0	0/0:15,0:15:42.01:0,42,744	0/0:26,0:25:56.98:0,57,793	0/0:10,0:10:23.80:0,24,231	0/0:18,0:18:45.07:0,45,719	0/0:15,0:15:41.53:0,42,597	0/0:13,0:12:26.98:0,27,352	0/0:7,0:7:20.54:0,21,245
chr10	23856101	.	AAAAACAAAAC	A	2031.32	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=-0.277;DP=491;FS=3.635;HRun=0;HaplotypeScore=184.7340;InbreedingCoeff=0.1147;MQ=63.14;MQ0=4;MQRankSum=-1.905;QD=7.44;ReadPosRankSum=1.288;VQSLOD=2.8119;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:57.13:0,57,1777	0/0:6,0:5:12.04:0,12,324	0/0:26,0:14:36.16:0,36,830	0/0:28,0:17:38.50:0,38,770	0/1:28,0:28:65.62:66,0,662	0/1:20,0:20:21.65:22,0,685	0/1:11,0:11:18.35:18,0,131	0/1:34,0:34:45.01:45,0,650	0/1:11,0:11:5.89:6,0,156	1/1:11,0:11:12.96:184,13,0	1/1:15,0:15:32.97:497,33,0	0/1:19,0:19:14.67:15,0,443	0/1:31,0:31:10.26:10,0,461	0/0:12,0:12:1.66:0,2,221	0/0:27,0:26:78.10:0,78,2858	0/0:24,0:24:63:0,63,2457	1/1:9,0:9:17.99:233,18,0	1/1:3,0:3:3:26,3,0	0/1:13,0:11:91.83:256,0,92	1/1:15,14:29:59.82:750,60,0	1/1:3,0:2:2.96:19,3,0	0/0:13,0:13:22.91:0,23,772	0/0:25,0:24:12.77:0,13,768	0/1:12,0:12:14.11:14,0,208	0/0:18,0:18:43.36:0,43,826	0/0:14,0:14:8.21:0,8,475	0/1:17,0:16:9.66:10,0,235	0/1:7,0:7:41.64:42,0,163
chr10	23856103	.	AAAC	A	1844.53	PASS	AB=0.952;AC=28;AF=0.500;AN=56;BaseQRankSum=1.054;DP=472;FS=16.520;HRun=0;HaplotypeScore=127.3185;InbreedingCoeff=-0.2055;MQ=62.35;MQ0=4;MQRankSum=-2.721;QD=5.46;ReadPosRankSum=1.228;VQSLOD=1.8943;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:57.17:0,57,1001	0/0:6,0:5:1.93:0,2,44	0/0:26,0:14:35.65:0,36,477	0/0:28,0:16:36.55:0,37,521	0/1:24,3:27:99:136,0,146	0/1:14,3:17:99:100,0,211	0/1:11,0:11:31.43:87,0,31	0/1:29,2:31:99:285,0,158	0/1:11,0:11:3.20:3,0,54	1/1:11,0:11:8.86:76,9,0	1/1:15,0:15:26.92:226,27,0	0/1:16,0:16:36.16:36,0,199	0/1:29,0:29:99:102,0,146	0/1:12,0:12:15.03:15,0,94	0/0:27,0:26:78.26:0,78,1498	0/0:23,0:23:63.17:0,63,1186	1/1:6,0:6:13.21:102,13,0	1/1:2,0:2:2.98:21,3,0	0/1:13,0:11:32.87:106,0,33	1/1:27,0:27:33.41:274,33,0	1/1:3,0:2:2.97:20,3,0	0/1:14,0:14:31.04:31,0,186	0/1:24,0:23:50.05:50,0,202	0/1:11,1:12:33.43:33,0,47	0/1:17,1:18:60.79:61,0,278	0/1:12,2:14:99:100,0,108	0/1:17,0:16:50.84:71,0,51	0/1:6,2:8:28.95:82,0,29
chr10	23856104	.	AAC	A	1739.50	PASS	AB=0.989;AC=28;AF=0.500;AN=56;BaseQRankSum=1.363;DP=467;FS=12.133;HRun=0;HaplotypeScore=120.3406;InbreedingCoeff=-0.1331;MQ=62.33;MQ0=4;MQRankSum=-3.434;QD=5.22;ReadPosRankSum=-0.939;VQSLOD=2.1360;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:57.11:0,57,810	0/0:6,0:5:9.93:0,10,40	0/0:26,0:14:37.25:0,37,411	0/0:28,0:16:34.96:0,35,373	0/1:26,0:26:69.51:125,0,70	0/1:17,0:17:99:108,0,124	0/1:10,0:10:5.06:81,0,5	0/1:30,1:31:92.25:298,0,92	0/1:10,0:10:1.96:2,0,33	1/1:10,0:10:8.82:60,9,0	1/1:15,0:15:26.67:177,27,0	0/1:15,0:15:38.39:38,0,101	0/1:29,0:29:52.87:92,0,53	0/1:11,0:11:14:14,0,55	0/0:27,0:26:78.11:0,78,1210	0/0:23,0:23:63.06:0,63,953	1/1:6,0:6:16.68:107,17,0	1/1:2,0:2:2.98:21,3,0	0/1:14,0:12:7.53:96,0,8	1/1:26,0:26:32.64:222,33,0	1/1:4,0:3:2.97:20,3,0	0/1:13,1:14:34.15:34,0,102	0/1:22,2:23:71.07:71,0,92	0/1:12,0:12:25.56:46,0,26	0/1:18,0:18:25.61:26,0,182	0/1:14,0:14:67.79:105,0,68	0/1:17,0:16:28.81:89,0,29	0/1:8,0:8:5.50:82,0,5
chr10	23856109	.	AAC	A	2624.71	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=7.601;DP=489;FS=7.634;HRun=0;HaplotypeScore=123.2304;InbreedingCoeff=0.7102;MQ=63.65;MQ0=4;MQRankSum=-4.207;QD=7.29;ReadPosRankSum=-4.474;VQSLOD=1.7885;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:50:0,50,232	1/1:6,0:5:1.26:6,1,0	0/0:27,0:14:24.56:0,25,339	0/0:29,0:17:25.01:0,25,252	1/1:28,0:28:31.26:199,31,0	1/1:17,0:17:13.48:86,13,0	1/1:11,0:11:9.56:67,10,0	1/1:32,0:32:36.81:232,37,0	1/1:11,0:11:2.53:6,3,0	1/1:11,3:14:31.03:241,31,0	1/1:13,8:21:47.53:356,48,0	1/1:14,0:14:5.14:25,5,0	1/1:29,0:29:17.95:100,18,0	1/1:12,0:12:5.14:25,5,0	0/0:30,0:29:80.73:0,81,1023	0/0:20,0:20:57.11:0,57,848	1/1:10,2:12:34.43:269,34,0	1/1:2,0:2:2.99:23,3,0	1/1:8,5:11:10.06:184,10,0	1/1:16,10:26:53.74:444,54,0	1/1:4,0:3:5.93:40,6,0	1/1:14,0:14:8.28:43,8,0	1/1:22,0:21:0.32:39,0,0	1/1:11,0:11:9.26:44,9,0	1/1:19,0:19:9.16:72,9,0	1/1:17,0:17:29.33:192,29,0	1/1:18,0:17:10.84:65,11,0	1/1:7,0:7:8.30:39,8,0
chr10	23856110	.	AC	A	3992.03	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=8.778;DP=481;FS=17.206;HRun=1;HaplotypeScore=111.8435;InbreedingCoeff=0.8268;MQ=64.05;MQ0=4;MQRankSum=-5.632;QD=10.62;ReadPosRankSum=-1.481;VQSLOD=0.2801;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:23:6.05:48,6,0	1/1:6,0:5:11.31:58,11,0	0/0:26,1:14:24.44:0,24,267	0/0:28,1:17:8.39:0,8,184	1/1:28,0:28:66.33:366,66,0	1/1:17,0:17:36.09:205,36,0	1/1:10,0:10:14.35:79,14,0	1/1:31,0:31:56.21:337,56,0	1/1:10,0:10:8.51:41,9,0	1/1:15,0:15:33.96:241,34,0	1/1:11,10:21:46.52:274,47,0	1/1:12,0:12:22.74:119,23,0	1/1:28,0:28:39.32:214,39,0	1/1:12,0:12:14.32:78,14,0	0/0:29,0:28:72.16:0,72,782	0/0:20,0:20:56.97:0,57,642	1/1:11,1:12:34.09:243,34,0	1/1:2,0:2:2.99:23,3,0	1/1:10,2:10:9.13:140,9,0	1/1:25,1:26:52.34:316,52,0	1/1:4,0:3:5.93:40,6,0	1/1:13,0:13:34.11:177,34,0	1/1:21,0:20:33.73:176,34,0	1/1:11,0:11:14.26:81,14,0	1/1:19,0:20:44.01:239,44,0	1/1:18,0:18:47.40:307,47,0	1/1:17,0:16:19.91:111,20,0	1/1:7,0:7:16.14:79,16,0
chr10	23856111	.	CA	C	373.32	PASS	AB=1.000;AC=10;AF=0.185;AN=54;BaseQRankSum=2.912;DP=488;FS=8.014;HRun=11;HaplotypeScore=125.9645;InbreedingCoeff=0.6028;MQ=64.15;MQ0=4;MQRankSum=-2.567;QD=3.33;ReadPosRankSum=4.289;VQSLOD=0.3006;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:2,21:23:50.93:419,51,0	0/0:6,0:5:11.13:0,11,51	0/0:27,1:14:16.57:0,17,155	0/0:28,1:17:1.29:0,1,134	0/0:25,0:26:28.69:0,29,119	0/0:17,0:17:21.15:0,21,112	0/0:11,0:11:6.45:0,6,27	0/0:19,0:32:26.51:0,27,135	0/0:10,0:10:7.86:0,8,32	0/1:17,0:17:1.21:1,0,13	1/1:22,0:22:7.50:23,8,0	0/0:12,0:12:18.27:0,18,84	0/0:26,0:28:25.07:0,25,106	0/0:12,0:12:10.66:0,11,45	0/0:28,1:29:50.30:0,50,684	0/0:21,0:21:57.13:0,57,597	1/1:12,0:12:5.33:16,5,0	./.	0/1:12,0:10:9.71:10,0,26	1/1:26,0:26:18.18:50,18,0	0/0:4,0:3:2.88:0,3,15	0/0:12,0:13:27.39:0,27,116	0/0:19,0:20:32.54:0,33,146	0/0:10,0:11:10.67:0,11,42	0/0:19,0:20:32.04:0,32,150	0/0:16,0:19:12.30:0,12,76	0/0:17,0:17:11.29:0,11,46	0/0:7,0:7:11.17:0,11,59
chr10	23856117	.	A	AAC	5377.88	PASS	AB=0.790;AC=32;AF=0.571;AN=56;BaseQRankSum=-0.725;DP=503;FS=13.165;HRun=0;HaplotypeScore=117.3430;InbreedingCoeff=0.7379;MQ=64.51;MQ0=4;MQRankSum=-6.663;QD=18.67;ReadPosRankSum=3.182;VQSLOD=4.6785;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:56.81:0,57,451	1/1:1,6:8:12.03:175,12,0	0/0:30,0:14:16.45:0,16,249	0/0:29,0:17:12.81:0,13,288	1/1:5,17:27:56.76:660,57,0	1/1:5,10:16:12.86:427,13,0	1/1:4,7:12:2.14:102,2,0	1/1:23,6:31:30.89:635,31,0	1/1:1,11:14:9.01:128,9,0	0/0:17,0:17:41.12:0,41,299	0/0:19,0:19:40.07:0,40,313	1/1:1,11:12:21.54:355,22,0	1/1:6,22:29:18.53:395,19,0	1/1:0,14:14:12.04:202,12,0	0/0:29,0:28:80.77:0,81,1010	0/0:22,0:22:63.15:0,63,863	0/1:11,0:11:15.73:16,0,142	0/0:3,0:3:5.96:0,6,44	0/0:12,0:10:28.45:0,28,242	0/0:25,0:25:41.81:0,42,361	0/0:5,0:4:5.96:0,6,45	1/1:2,11:14:34.07:529,34,0	1/1:8,13:20:10.03:447,10,0	1/1:3,10:13:19.36:252,19,0	1/1:5,14:21:34.10:547,34,0	1/1:9,0:19:1.25:305,1,0	0/1:5,0:18:6.34:114,0,6	1/1:5,0:7:7.70:89,8,0
chr10	23856122	.	A	AAC	2431.59	PASS	AB=1.000;AC=35;AF=0.625;AN=56;BaseQRankSum=5.696;DP=488;FS=64.083;HRun=0;HaplotypeScore=123.1401;InbreedingCoeff=0.2534;MQ=66.72;MQ0=4;MQRankSum=-6.245;QD=6.91;ReadPosRankSum=4.131;VQSLOD=0.9709;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:23:56.69:0,57,424	0/1:9,0:8:8.76:29,0,9	0/0:27,0:16:16.09:0,16,269	0/0:27,0:18:3.94:0,4,201	0/1:26,0:26:89.64:96,0,90	1/1:14,0:14:7.59:96,8,0	0/1:11,0:11:10.33:20,0,10	0/1:32,0:32:2.03:2,0,275	0/1:14,0:14:13.13:25,0,13	1/1:3,15:20:50.29:412,50,0	1/1:19,0:19:42.41:324,42,0	1/1:12,0:12:19.28:92,19,0	0/1:26,0:26:9.24:84,0,9	1/1:14,0:14:9.15:47,9,0	0/0:26,0:25:74.44:0,74,864	0/0:22,0:22:63.11:0,63,776	1/1:12,0:12:29.47:240,29,0	1/1:3,0:3:5.96:44,6,0	1/1:13,0:12:31.81:203,32,0	1/1:25,0:25:35.67:322,36,0	1/1:5,0:4:8.93:66,9,0	0/1:14,0:14:14.79:101,0,15	1/1:18,0:17:11.04:190,11,0	1/1:14,0:14:0.26:43,0,0	0/1:19,0:19:13.80:115,0,14	0/1:17,0:17:45.14:45,0,59	1/1:14,0:14:4.88:18,5,0	0/0:8,0:8:9.83:0,10,113
chr10	23856308	.	A	AG	7894.68	PASS	AB=0.889;AC=50;AF=0.926;AN=54;BaseQRankSum=2.799;DP=378;FS=5.631;HRun=0;HaplotypeScore=444.8039;InbreedingCoeff=0.2628;MQ=53.50;MQ0=0;MQRankSum=-1.614;QD=21.99;ReadPosRankSum=0.898;VQSLOD=1.7795;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,8:8:14.98:124,15,0	1/1:0,4:4:11.98:99,12,0	0/1:5,1:3:2.26:72,0,2	0/1:6,0:6:1.66:34,0,2	1/1:0,17:17:47.74:360,48,0	1/1:0,12:12:23.96:199,24,0	1/1:0,7:7:14.97:121,15,0	1/1:0,21:21:51.05:476,51,0	1/1:0,16:16:44.89:361,45,0	1/1:1,16:17:45.04:429,45,0	1/1:1,24:25:71.77:567,72,0	1/1:0,15:15:44.21:340,44,0	1/1:0,10:11:32.32:254,32,0	1/1:0,16:16:38.90:313,39,0	1/1:0,25:24:68.87:567,69,0	1/1:0,18:18:53.79:436,54,0	1/1:0,3:3:8.98:73,9,0	1/1:0,3:3:6.89:56,7,0	1/1:0,7:7:17.81:154,18,0	1/1:2,26:28:77.82:636,78,0	1/1:0,1:1:2.98:22,3,0	1/1:0,22:22:65.83:528,66,0	1/1:0,15:15:44.89:360,45,0	./.	1/1:0,20:20:59.84:481,60,0	1/1:0,26:26:67.97:586,68,0	0/0:17,0:17:1.82:0,2,5	1/1:0,9:9:27.01:245,27,0
chr10	23856341	.	A	AT	6769.63	PASS	AC=50;AF=1.000;AN=50;BaseQRankSum=-0.661;DP=431;FS=8.962;HRun=1;HaplotypeScore=536.8897;InbreedingCoeff=-0.0086;MQ=29.29;MQ0=0;MQRankSum=0.683;QD=15.89;ReadPosRankSum=-1.143;VQSLOD=1.0721;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,9:10:17.68:130,18,0	1/1:2,3:5:11.88:101,12,0	./.	./.	1/1:5,14:19:37.95:278,38,0	1/1:1,12:13:29.03:171,29,0	1/1:2,11:13:26.58:207,27,0	1/1:5,13:19:41.94:283,42,0	1/1:1,19:20:53.16:407,53,0	1/1:3,16:19:50.85:442,51,0	1/1:4,18:22:44.08:341,44,0	1/1:1,16:17:47.02:306,47,0	1/1:2,13:15:35.05:205,35,0	1/1:1,19:20:43.93:282,44,0	1/1:5,21:26:61.50:417,61,0	1/1:3,23:26:67.05:425,67,0	1/1:0,4:4:11.67:71,12,0	1/1:1,2:3:7.97:47,8,0	1/1:4,9:13:31.21:238,31,0	1/1:6,26:32:80.94:519,81,0	1/1:2,7:9:8.86:63,9,0	1/1:3,16:19:44.01:339,44,0	1/1:1,21:22:55.42:371,55,0	./.	1/1:3,21:24:48.02:433,48,0	1/1:4,23:27:60.25:446,60,0	1/1:15,6:20:16.63:104,17,0	1/1:0,8:8:20.82:147,21,0
chr10	23856377	.	TTTCTC	T	1737.05	PASS	AB=0.918;AC=23;AF=0.411;AN=56;BaseQRankSum=5.097;DP=400;FS=0.604;HRun=0;HaplotypeScore=315.0363;InbreedingCoeff=-0.5594;MQ=42.68;MQ0=5;MQRankSum=-0.457;QD=5.95;ReadPosRankSum=-4.441;VQSLOD=1.2377;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:14,0:14:45.98:46,0,130	0/1:1,1:2:5.49:48,0,5	0/0:16,0:4:12.51:0,13,256	0/0:22,0:8:7.93:0,8,180	0/1:15,3:18:85.30:85,0,122	0/1:11,1:12:28.87:29,0,101	0/1:20,0:20:42.78:43,0,132	0/1:5,0:5:5.34:54,0,5	0/1:14,1:15:57.78:58,0,133	0/1:13,1:14:19.82:134,0,20	0/1:10,1:11:43.24:137,0,43	0/1:14,2:16:99:148,0,137	0/1:13,2:15:77.75:78,0,150	0/1:16,2:18:89.26:89,0,163	0/1:22,0:21:57.40:57,0,382	0/0:27,0:27:46.62:0,47,682	0/1:3,1:4:31.14:31,0,40	0/1:6,0:6:14.96:45,0,15	1/1:1,2:3:1.02:130,1,0	0/1:24,5:29:99:308,0,124	0/1:11,1:12:58.36:58,0,81	0/1:8,1:9:83.60:96,0,84	0/1:17,1:18:42.34:42,0,197	0/0:8,0:8:10.74:0,11,67	0/1:22,1:23:99:150,0,170	0/0:20,0:20:40.05:0,40,411	0/0:15,0:15:32.42:0,32,331	0/1:6,0:6:28.12:28,0,35
chr10	23856399	.	TCTCCCTCCTTCC	T	2229.94	PASS	AC=12;AF=0.222;AN=54;BaseQRankSum=2.764;DP=497;FS=0.000;HRun=0;HaplotypeScore=295.1716;InbreedingCoeff=0.9417;MQ=48.80;MQ0=10;MQRankSum=0.526;QD=23.47;ReadPosRankSum=0.445;VQSLOD=1.9265;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:41.09:0,41,1570	0/0:5,0:4:12.04:0,12,519	0/0:30,0:8:23.72:0,24,545	0/0:35,0:14:23.48:0,23,650	0/0:19,0:19:36.07:0,36,1517	0/0:14,0:14:30.10:0,30,1249	0/0:21,0:21:36.12:0,36,1559	0/0:15,0:15:32.69:0,33,1296	0/0:19,0:19:42.11:0,42,1326	1/1:2,15:19:48.11:902,48,0	1/1:4,10:15:8.96:167,9,0	0/0:17,0:17:39.13:0,39,1827	0/0:15,0:15:30.10:0,30,1399	0/0:21,0:21:48.16:0,48,2068	0/0:22,0:21:45.15:0,45,1987	0/0:28,0:28:69.20:0,69,2738	1/1:7,0:8:15.05:336,15,0	1/1:7,0:8:9.03:197,9,0	./.	1/1:15,16:33:21.07:600,21,0	1/1:10,0:12:11.90:205,12,0	0/0:9,0:9:9.03:0,9,453	0/0:18,0:18:24.01:0,24,1026	0/0:15,0:15:30.10:0,30,1249	0/0:21,0:21:33.06:0,33,1434	0/0:22,0:22:42.35:0,42,2482	0/0:18,0:18:33.11:0,33,1557	0/0:8,0:8:15.05:0,15,665
chr10	23856600	.	G	GA	13715.04	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-0.304;DP=602;FS=0.941;HRun=8;HaplotypeScore=78.2394;InbreedingCoeff=0.9964;MQ=65.31;MQ0=0;MQRankSum=-4.177;QD=26.68;ReadPosRankSum=1.274;VQSLOD=5.4336;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:51.02:0,51,466	1/1:2,14:16:45.13:518,45,0	0/0:12,0:12:30.02:0,30,274	0/0:13,0:13:33:0,33,295	1/1:3,23:26:51.07:559,51,0	1/1:3,23:26:41.74:734,42,0	1/1:5,14:19:39.12:450,39,0	1/1:6,27:33:78.21:888,78,0	1/1:1,14:15:30.09:346,30,0	1/1:3,25:29:69.20:791,69,0	1/1:4,21:25:51.15:588,51,0	1/1:5,15:20:45.08:501,45,0	1/1:2,25:27:72.21:831,72,0	1/1:6,29:35:53.64:853,54,0	0/0:21,0:21:54.02:0,54,494	0/0:21,0:21:28.56:0,29,437	1/1:1,20:22:57:638,57,0	1/1:2,8:10:21.06:242,21,0	1/1:2,24:26:47.72:790,48,0	1/1:3,31:34:75.22:865,75,0	1/1:2,8:10:21.06:242,21,0	1/1:1,20:22:53.99:602,54,0	1/1:3,15:19:44.97:499,45,0	1/1:0,12:12:36.11:415,36,0	1/1:4,26:30:75.22:865,75,0	1/1:5,21:26:60.18:692,60,0	1/1:2,23:25:26.53:561,27,0	1/1:0,7:7:21.06:242,21,0
chr10	23856822	.	A	AC	12827.59	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-6.833;DP=627;FS=5.634;HRun=7;HaplotypeScore=69.6132;InbreedingCoeff=0.9850;MQ=80.82;MQ0=0;MQRankSum=-3.870;QD=25.45;ReadPosRankSum=0.914;VQSLOD=5.5809;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,99,956	1/1:2,9:11:24.07:290,24,0	0/0:21,0:21:54.02:0,54,507	0/0:18,0:18:34.78:0,35,356	1/1:3,23:26:69.17:814,69,0	1/1:0,24:24:69.21:833,69,0	1/1:3,20:23:63.19:757,63,0	1/1:4,28:32:84.23:990,84,0	1/1:2,11:13:33.10:396,33,0	1/1:14,0:23:52.41:331,52,0	1/1:2,1:18:28.87:186,29,0	1/1:4,24:29:47.34:806,47,0	1/1:1,27:28:69.21:833,69,0	1/1:5,35:40:93.25:1108,93,0	0/0:23,0:23:60.09:0,60,579	0/0:24,1:25:29.84:0,30,565	1/1:2,5:19:32.30:267,32,0	1/1:1,1:6:9.36:87,9,0	1/1:12,1:23:20.08:214,20,0	1/1:4,2:22:34.41:220,34,0	1/1:7,4:13:25.91:210,26,0	1/1:2,14:17:45.14:543,45,0	1/1:2,17:19:45.13:534,45,0	1/1:4,21:25:57.04:688,57,0	1/1:1,23:24:51.16:616,51,0	1/1:3,11:14:33.10:398,33,0	1/1:3,34:33:90.28:1087,90,0	1/1:2,16:18:51.16:615,51,0
chr10	23856904	.	CTA	C	500.08	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.578;DP=671;FS=12.787;HRun=0;HaplotypeScore=82.6863;InbreedingCoeff=0.9978;MQ=87.86;MQ0=0;MQRankSum=-0.866;QD=38.47;ReadPosRankSum=0.832;VQSLOD=5.1671;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,126,2391	1/1:0,13:13:39.13:595,39,0	0/0:24,0:23:63.18:0,63,1119	0/0:27,0:25:63.29:0,63,1173	0/0:33,0:33:93.28:0,93,1723	0/0:25,0:25:69.24:0,69,1332	0/0:25,0:25:75.24:0,75,1413	0/0:37,0:37:99:0,108,2081	0/0:17,0:17:48.16:0,48,926	0/0:28,0:28:81.28:0,81,1564	0/0:27,0:27:75.26:0,75,1430	0/0:28,0:28:84.29:0,84,1614	0/0:28,0:28:78.27:0,78,1506	0/0:27,0:27:75.26:0,75,1448	0/0:15,0:15:45.14:0,45,834	0/0:21,0:21:63.22:0,63,1216	0/0:24,0:24:66.23:0,66,1256	0/0:8,0:8:24.08:0,24,463	0/0:22,0:22:66.21:0,66,1206	0/0:35,0:35:99:0,99,1903	0/0:17,0:17:51.17:0,51,985	0/0:13,0:13:39.12:0,39,719	0/0:22,0:22:63.22:0,63,1217	0/0:35,0:35:99:0,99,1878	0/0:21,0:21:57.20:0,57,1101	0/0:19,0:19:57.20:0,57,1100	0/0:22,0:22:57.18:0,57,1054	0/0:15,0:15:45.15:0,45,869
chr10	23857281	.	TA	T	11284.57	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=3.887;DP=563;FS=1.650;HRun=8;HaplotypeScore=58.9029;InbreedingCoeff=0.9846;MQ=76.27;MQ0=1;MQRankSum=-5.556;QD=23.81;ReadPosRankSum=5.260;VQSLOD=5.2832;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:15:30.09:0,30,362	1/1:2,10:12:24.04:232,24,0	0/0:14,0:13:32.96:0,33,342	0/0:21,0:17:36.03:0,36,391	1/1:5,25:30:75.11:724,75,0	1/1:3,25:28:60.09:579,60,0	1/1:1,12:13:30.05:290,30,0	1/1:3,25:28:75.08:711,75,0	1/1:1,15:16:42.07:406,42,0	1/1:3,23:26:66.06:628,66,0	1/1:2,24:26:69.03:654,69,0	1/1:1,17:19:41.10:383,41,0	1/1:3,15:18:42.07:406,42,0	1/1:1,25:26:69.11:666,69,0	0/0:14,0:14:36.10:0,36,425	0/0:21,1:22:28.19:0,28,613	1/1:2,22:24:47.86:463,48,0	1/1:0,11:11:30.05:290,30,0	1/1:3,15:18:44.91:412,45,0	1/1:5,30:35:84.12:810,84,0	1/1:0,4:4:12.02:116,12,0	1/1:1,21:22:63.10:608,63,0	1/1:1,22:23:57.07:550,57,0	1/1:0,13:13:39.06:377,39,0	1/1:2,16:18:42.06:406,42,0	1/1:2,23:25:72.09:686,72,0	1/1:2,30:32:81.08:773,81,0	1/1:0,7:7:12.02:116,12,0
chr10	23859444	.	GAATCGACA	G	17282.69	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=16.636;DP=601;FS=0.000;HRun=0;HaplotypeScore=163.4289;InbreedingCoeff=0.9960;MQ=81.89;MQ0=0;MQRankSum=-17.067;QD=62.39;ReadPosRankSum=1.017;VQSLOD=4.5578;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:27.07:0,27,1057	1/1:1,8:9:18.06:509,18,0	0/0:24,0:24:60.21:0,60,2477	0/0:17,0:17:47.64:0,48,1412	1/1:1,31:32:81.28:2192,81,0	1/1:5,27:32:66.23:1867,66,0	1/1:1,14:15:36.12:970,36,0	1/1:4,26:30:78.23:1892,78,0	1/1:1,14:15:27.09:764,27,0	0/0:28,0:28:81.28:0,81,3523	0/0:26,0:26:78.27:0,78,3212	1/1:0,21:21:51.18:1442,51,0	1/1:2,23:25:60.21:1651,60,0	1/1:1,26:27:66.23:1839,66,0	0/0:31,0:31:81.26:0,81,3341	0/0:24,0:24:69.24:0,69,3058	0/0:9,0:9:24.08:0,24,1046	0/0:9,0:9:21.07:0,21,872	0/0:15,0:15:45.15:0,45,1883	0/0:40,0:40:99:0,114,4842	0/0:22,0:22:66.23:0,66,2836	1/1:0,17:17:39.13:1103,39,0	1/1:1,20:21:39.13:1103,39,0	1/1:1,10:11:17.88:509,18,0	1/1:4,18:22:51.18:1443,51,0	0/0:22,0:22:60.21:0,60,2659	0/0:39,0:38:99:0,114,4581	0/0:8,0:8:21.07:0,21,930
chr10	23859963	.	T	TCC	156.72	PASS	AB=1.000;AC=9;AF=0.90;AN=10;BaseQRankSum=0.474;DP=20;FS=0.000;HRun=1;HaplotypeScore=45.9337;MQ=61.61;MQ0=0;MQRankSum=1.107;QD=14.25;ReadPosRankSum=0.158;VQSLOD=0.3523;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,4:4:12.01:127,12,0	./.	./.	./.	1/1:1,0:1:2.50:9,2,0	./.	./.	./.	./.	./.	./.	./.	1/1:1,0:1:2.74:12,3,0	./.	./.	./.	./.	0/1:2,0:2:9.24:36,0,9	./.	./.	./.	./.	./.	./.	1/1:1,1:3:6.43:45,6,0	./.	./.	./.
chr10	23860655	.	CTCT	C	61.92	PASS	AB=0.832;AC=7;AF=0.146;AN=48;BaseQRankSum=3.796;DP=197;FS=0.000;HRun=0;HaplotypeScore=32.8966;InbreedingCoeff=0.1241;MQ=23.76;MQ0=37;MQRankSum=-0.421;QD=1.44;ReadPosRankSum=0.021;VQSLOD=1.0595;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	0/0:1,0:1:3.01:0,3,55	./.	./.	0/1:11,4:12:2.05:2,0,156	0/0:6,0:4:7.60:0,8,116	0/0:12,0:10:21.07:0,21,341	0/1:7,2:6:32.28:93,0,32	0/0:6,0:4:8.98:0,9,130	0/0:11,0:11:27.31:0,27,399	0/0:8,0:7:20.92:0,21,248	0/0:2,0:2:6.02:0,6,104	0/0:10,0:10:4.61:0,5,226	0/0:11,0:7:13.79:0,14,231	0/0:7,0:4:6.02:0,6,105	0/0:4,0:2:0:0,0,0	0/0:8,0:5:7.99:0,8,176	0/1:7,1:7:43.64:44,0,58	0/0:2,0:1:2.99:0,3,23	0/0:11,0:8:12.04:0,12,195	0/0:4,0:1:3.01:0,3,45	0/0:14,0:13:13.15:0,13,281	0/0:6,0:5:11.99:0,12,176	0/0:10,0:2:2.97:0,3,20	1/1:6,0:4:0.79:2,1,0	0/0:15,0:12:1.90:0,2,348	1/1:4,1:5:2.96:19,3,0	./.
chr10	23860703	.	CTCT	C	163.01	PASS	AB=0.926;AC=10;AF=0.238;AN=42;BaseQRankSum=-1.802;DP=404;FS=0.000;HRun=0;HaplotypeScore=55.4170;InbreedingCoeff=0.2614;MQ=26.66;MQ0=119;MQRankSum=1.627;QD=1.44;ReadPosRankSum=-1.724;VQSLOD=1.1023;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:4:0.47:0,0,1	./.	./.	./.	0/1:19,3:14:6.16:32,0,6	0/0:15,0:9:8:0,8,37	0/0:22,0:16:0:0,0,0	./.	./.	0/0:21,0:18:14.81:0,15,170	1/1:13,0:10:2.87:37,3,0	1/1:4,1:5:3:37,3,0	./.	0/1:14,2:11:6.78:66,0,7	0/0:15,0:11:8.87:0,9,41	0/0:16,0:9:16.67:0,17,78	0/1:26,0:15:8.13:8,0,91	0/1:13,1:8:30.03:30,0,40	0/0:10,0:7:8.49:0,8,42	0/0:29,0:25:19.29:0,19,174	0/0:19,0:7:5.98:0,6,46	1/1:17,0:15:6.02:74,6,0	0/0:16,0:16:10.11:0,10,108	0/0:28,0:14:8.18:0,8,67	0/0:12,0:7:8.82:0,9,106	0/0:21,0:16:5.02:0,5,19	./.	0/0:8,0:2:3.01:0,3,47
chr10	23864766	.	G	GA	9411.49	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-15.915;DP=599;FS=0.000;HRun=6;HaplotypeScore=61.0823;InbreedingCoeff=0.9732;MQ=75.07;MQ0=0;MQRankSum=0.619;QD=31.69;ReadPosRankSum=1.981;VQSLOD=5.2790;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:33.06:0,33,331	1/1:0,7:7:21.07:259,21,0	0/0:26,0:27:47.18:0,47,528	0/0:22,0:23:3.21:0,3,302	1/1:4,37:41:99:1394,111,0	1/1:2,24:26:72.23:906,72,0	1/1:1,17:18:39.12:491,39,0	1/1:7,33:40:97.16:1182,97,0	1/1:3,13:16:36.12:453,36,0	0/0:22,0:22:54.11:0,54,551	0/0:29,0:29:84.19:0,84,857	1/1:0,22:22:63.20:793,63,0	1/1:3,20:23:57.18:716,57,0	1/1:2,24:26:63.20:793,63,0	0/0:26,0:26:63.11:0,63,634	0/0:9,0:9:27.05:0,27,269	0/0:13,0:13:39.09:0,39,398	0/0:15,0:15:39.06:0,39,389	0/0:21,0:21:48.10:0,48,489	0/0:34,1:35:55.45:0,55,873	0/0:7,0:7:21.05:0,21,214	1/1:0,9:10:26.92:312,27,0	1/1:2,32:34:78.24:981,78,0	1/1:0,7:7:15.05:189,15,0	1/1:1,26:27:75.24:944,75,0	0/0:18,0:18:51.09:0,51,508	0/0:27,0:27:78.16:0,78,789	0/0:16,0:16:44.91:0,45,459
chr10	23865931	.	G	GT	3013.38	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-9.875;DP=491;FS=0.000;HRun=8;HaplotypeScore=52.1667;InbreedingCoeff=0.9775;MQ=72.29;MQ0=0;MQRankSum=-1.659;QD=25.11;ReadPosRankSum=2.286;VQSLOD=4.2880;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:37.84:0,38,334	0/0:3,0:3:9:0,9,82	0/0:31,0:22:35.66:0,36,397	0/0:24,0:14:26.87:0,27,227	0/0:16,0:16:42.01:0,42,380	0/0:23,0:23:66.04:0,66,604	0/0:13,0:13:26.83:0,27,246	0/0:35,0:35:87.01:0,87,784	0/0:17,0:17:45.02:0,45,408	1/1:1,18:19:51.15:584,51,0	1/1:0,19:19:57.13:643,57,0	0/0:16,0:16:44.99:0,45,402	0/0:19,0:19:53.99:0,54,486	0/0:22,0:22:57:0,57,516	0/0:13,0:13:33.01:0,33,302	0/0:25,0:25:72.02:0,72,652	1/1:7,20:27:56.96:636,57,0	1/1:3,9:12:27.08:308,27,0	1/1:4,8:12:24.07:277,24,0	1/1:1,15:16:36.07:401,36,0	1/1:2,13:14:33.01:363,33,0	0/0:10,0:10:30.02:0,30,274	0/0:16,0:16:45:0,45,406	0/0:12,0:12:30:0,30,269	0/0:14,0:14:33:0,33,302	0/0:23,0:23:63:0,63,573	0/0:20,0:21:32.39:0,32,437	0/0:4,0:4:9:0,9,82
chr10	23867488	.	ATCC	A	1274.13	PASS	AB=0.667;AC=7;AF=0.125;AN=56;BaseQRankSum=8.185;DP=620;FS=14.749;HRun=0;HaplotypeScore=88.4987;InbreedingCoeff=0.7722;MQ=86.49;MQ0=0;MQRankSum=-5.147;QD=32.67;ReadPosRankSum=0.688;VQSLOD=2.9245;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,16:17:42.14:699,42,0	0/0:21,0:21:60.21:0,60,1417	0/0:23,0:23:67.78:0,68,1443	0/0:19,0:19:44.71:0,45,978	0/0:34,0:34:96.33:0,96,2267	0/0:27,0:27:81.28:0,81,1915	0/0:15,0:15:45.15:0,45,1063	0/0:29,0:29:87.29:0,87,2022	0/0:19,0:19:57.20:0,57,1315	0/0:30,0:30:90.29:0,90,2044	0/0:17,0:17:51.18:0,51,1187	0/0:37,0:37:99:0,111,2531	0/0:26,0:26:75.26:0,75,1771	0/0:26,0:26:78.27:0,78,1836	0/0:28,0:28:78.27:0,78,1804	0/0:25,0:25:75.26:0,75,1776	0/0:25,0:25:75.26:0,75,1773	0/0:14,0:14:42.14:0,42,992	0/0:16,0:16:48.16:0,48,1120	0/0:31,0:31:93.32:0,93,2180	0/0:22,0:22:66.23:0,66,1560	0/0:20,0:20:60.21:0,60,1418	0/0:21,0:21:63.22:0,63,1467	0/0:29,0:29:87.30:0,87,2055	0/0:27,0:27:81.28:0,81,1895	0/1:5,5:10:99:238,0,257	1/1:0,11:11:24.08:423,24,0	1/1:0,1:1:3.01:53,3,0
chr10	23869926	.	GCA	G	718.89	PASS	AB=0.881;AC=24;AF=0.444;AN=54;BaseQRankSum=9.310;DP=451;FS=6.997;HRun=0;HaplotypeScore=71.3617;InbreedingCoeff=-0.2706;MQ=62.88;MQ0=3;MQRankSum=-2.532;QD=2.36;ReadPosRankSum=0.662;VQSLOD=0.2812;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:17:11.91:64,12,0	0/0:8,0:10:0.85:0,1,168	./.	0/0:20,0:10:3.01:0,3,43	0/1:28,2:30:55.15:55,0,633	0/1:15,3:18:80.46:80,0,290	0/0:15,0:17:10.80:0,11,283	0/0:19,0:19:21.17:0,21,204	0/1:11,1:12:4.22:4,0,380	0/1:14,2:16:29.54:30,0,451	0/1:12,5:17:7.22:7,0,337	0/1:13,1:13:10.24:10,0,275	0/1:6,1:7:16.28:16,0,211	0/0:19,0:19:36.10:0,36,529	0/0:26,1:26:37.88:0,38,966	0/1:19,1:20:30.25:30,0,501	0/1:15,4:19:28.32:28,0,426	0/1:6,3:9:47.56:48,0,174	0/1:7,0:7:33.15:33,0,63	0/1:12,7:19:99:167,0,285	0/1:12,0:15:15.41:15,0,192	0/1:10,1:11:25.21:25,0,187	0/0:16,0:18:21.75:0,22,421	0/1:17,2:19:44.60:45,0,221	0/1:16,0:15:12.66:13,0,380	1/1:17,0:17:22.74:101,23,0	1/1:18,0:18:5.27:95,5,0	1/1:4,0:4:2.80:13,3,0
chr10	23869947	.	CACACACACAG	C	1494.02	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=8.044;DP=486;FS=12.510;HRun=0;HaplotypeScore=146.8041;InbreedingCoeff=0.8789;MQ=57.01;MQ0=3;MQRankSum=-4.872;QD=26.21;ReadPosRankSum=1.721;VQSLOD=2.5539;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:15,7:22:32.77:700,33,0	0/0:8,0:8:15.05:0,15,574	0/0:18,0:10:20.43:0,20,166	0/0:18,0:4:9.03:0,9,278	0/0:26,0:26:72.22:0,72,2585	0/0:19,0:19:48.61:0,49,1579	0/0:23,0:23:2.71:0,3,1320	0/0:21,0:21:51.97:0,52,972	0/0:16,0:16:39.12:0,39,1525	0/0:19,0:19:57.09:0,57,2062	0/0:18,0:18:39.10:0,39,1462	0/0:19,0:18:38.04:0,38,1423	0/0:9,0:9:24.05:0,24,920	0/0:22,0:22:50.93:0,51,1828	0/0:28,0:27:78.22:0,78,3231	0/0:17,0:17:45.14:0,45,1827	0/0:22,0:22:51.17:0,51,1802	0/0:10,0:10:24.08:0,24,738	0/0:12,0:12:32.44:0,32,709	0/0:22,0:22:49.18:0,49,1936	0/0:20,0:20:45.10:0,45,1111	0/0:10,0:10:27.09:0,27,978	0/0:19,0:19:48.61:0,49,1699	0/0:17,0:17:33.10:0,33,1111	0/0:16,0:15:42.10:0,42,1511	1/1:15,1:16:35.78:445,36,0	1/1:13,2:15:32.29:464,32,0	1/1:4,0:4:3.01:35,3,0
chr10	23869949	.	CACACACAG	C	1958.04	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=7.873;DP=481;FS=13.826;HRun=0;HaplotypeScore=127.4813;InbreedingCoeff=0.9095;MQ=58.35;MQ0=3;MQRankSum=-4.265;QD=37.65;ReadPosRankSum=0.954;VQSLOD=2.6471;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:20:33.25:462,33,0	0/0:7,0:7:15.05:0,15,450	0/0:16,0:9:20.43:0,20,165	0/0:18,0:5:5.20:0,5,187	0/0:25,0:25:72.22:0,72,2092	0/0:18,0:18:48.59:0,49,1240	0/0:22,0:22:36.47:0,36,1049	0/0:23,0:23:54.04:0,54,852	0/0:16,0:16:39.10:0,39,1246	0/0:19,0:19:57.09:0,57,1726	0/0:18,0:18:39.10:0,39,1226	0/0:19,0:18:38.46:0,38,1167	0/0:11,0:11:24.94:0,25,770	0/0:21,0:21:47.98:0,48,1487	0/0:28,0:27:75.23:0,75,2630	0/0:19,0:19:41.97:0,42,1459	0/0:22,0:22:53.93:0,54,1403	0/0:10,0:10:24.04:0,24,571	0/0:13,0:13:35.18:0,35,560	0/0:23,0:23:52.17:0,52,1607	0/0:21,0:21:30.97:0,31,881	0/0:10,0:10:27.09:0,27,802	0/0:19,0:19:48.09:0,48,1340	0/0:15,0:15:33.10:0,33,884	0/0:16,0:15:40.65:0,41,1227	1/1:4,11:15:36.99:806,37,0	1/1:9,6:15:33.10:759,33,0	1/1:0,2:2:3.01:82,3,0
chr10	23870521	.	G	GTA	2022.08	PASS	AB=1.000;AC=23;AF=0.500;AN=46;BaseQRankSum=-5.337;DP=153;FS=6.550;HRun=0;HaplotypeScore=30.4102;InbreedingCoeff=0.4914;MQ=62.36;MQ0=4;MQRankSum=3.756;QD=20.85;ReadPosRankSum=-2.691;VQSLOD=2.1404;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:2,0:2:1.25:0,1,3	1/1:1,0:1:3.01:37,3,0	./.	0/1:6,0:3:0:0,0,0	1/1:6,0:6:3.01:46,3,0	0/1:6,0:6:28.81:84,0,29	1/1:1,0:1:3.01:47,3,0	1/1:11,25:36:78.16:1047,78,0	1/1:5,0:5:12.03:165,12,0	0/0:4,0:4:9.03:0,9,114	0/0:3,0:3:6.02:0,6,76	1/1:4,0:4:3.01:46,3,0	1/1:3,0:3:6.01:70,6,0	1/1:8,0:8:18.04:248,18,0	./.	0/0:2,0:2:6.02:0,6,76	0/0:4,0:4:6.02:0,6,75	0/0:6,0:5:9.03:0,9,108	0/0:6,0:5:8.99:0,9,102	0/0:3,0:3:6.02:0,6,76	./.	1/1:2,0:2:6.02:93,6,0	./.	./.	1/1:10,0:10:18.06:284,18,0	0/0:13,0:13:7.78:0,8,25	0/1:9,0:9:11.34:11,0,23	0/0:8,0:6:7.61:0,8,29
chr10	23870561	.	A	AAATG	329.62	PASS	AB=0.857;AC=8;AF=0.250;AN=32;BaseQRankSum=1.908;DP=85;FS=10.201;HRun=0;HaplotypeScore=38.5396;InbreedingCoeff=0.2168;MQ=50.49;MQ0=5;MQRankSum=-2.238;QD=11.77;ReadPosRankSum=-1.413;VQSLOD=0.8108;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,0:2:3.01:48,3,0	0/0:1,0:1:3.01:0,3,32	1/1:3,0:2:0.47:1,0,0	./.	0/0:4,0:4:9.01:0,9,119	0/0:3,0:3:6.01:0,6,77	./.	0/0:16,0:15:42.02:0,42,591	./.	./.	0/0:2,0:2:3.01:0,3,50	./.	./.	0/0:2,0:2:3.01:0,3,49	./.	0/0:1,0:1:3.01:0,3,37	0/0:6,0:6:15.05:0,15,213	0/0:3,0:2:6.02:0,6,83	0/0:3,0:2:3.01:0,3,40	./.	./.	./.	./.	./.	0/0:6,0:6:5.99:0,6,50	0/1:6,0:6:60.05:63,0,60	0/1:6,3:10:36.46:113,0,36	1/1:4,3:7:14.84:210,15,0
chr10	23871222	.	TA	T	1381.21	PASS	AB=0.929;AC=9;AF=0.161;AN=56;BaseQRankSum=12.293;DP=533;FS=2.176;HRun=11;HaplotypeScore=62.0550;InbreedingCoeff=0.8462;MQ=77.16;MQ0=0;MQRankSum=0.514;QD=14.09;ReadPosRankSum=0.775;VQSLOD=3.9503;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,14:18:38.94:320,39,0	0/0:6,0:6:18.05:0,18,192	0/0:20,0:20:29.15:0,29,352	0/1:12,1:12:29.25:29,0,80	0/0:37,1:38:71.45:0,71,898	0/0:27,0:27:72.16:0,72,755	0/0:15,0:15:39.10:0,39,416	0/0:24,0:24:45.11:0,45,480	0/0:14,0:14:39.10:0,39,416	0/0:15,0:15:33.08:0,33,352	0/0:27,0:27:48.10:0,48,493	0/0:17,0:17:48.11:0,48,505	0/0:19,0:19:45.10:0,45,473	0/0:16,0:16:33.08:0,33,352	0/0:19,1:20:8.19:0,8,489	0/0:22,0:23:56.98:0,57,590	0/0:17,0:17:42.10:0,42,442	0/0:10,0:10:24.06:0,24,255	0/0:13,0:15:35.86:0,36,352	0/0:17,0:18:35.90:0,36,347	0/0:9,0:9:24.01:0,24,227	0/0:19,0:19:45.01:0,45,451	0/0:29,1:30:44.51:0,45,644	0/0:13,0:13:39.10:0,39,416	0/0:22,1:23:35.46:0,35,561	1/1:7,19:26:24.90:411,25,0	1/1:2,32:34:58.78:637,59,0	1/1:0,7:7:17.98:148,18,0
chr10	23872242	.	T	TTGTGTGTGTGTGTG	15091.01	PASS	AB=1.000;AC=48;AF=0.857;AN=56;BaseQRankSum=3.018;DP=659;FS=16.876;HRun=0;HaplotypeScore=255.4962;InbreedingCoeff=0.5083;MQ=63.08;MQ0=2;MQRankSum=-6.749;QD=26.06;ReadPosRankSum=-1.191;VQSLOD=2.4169;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:25:17.97:616,18,0	1/1:7,0:7:6.02:270,6,0	0/1:33,0:19:3.54:4,0,43	0/0:31,0:24:3.79:0,4,190	1/1:20,0:20:5.53:115,6,0	1/1:16,0:31:12.04:609,12,0	1/1:26,0:25:18.02:350,18,0	1/1:43,0:42:57.54:1550,58,0	1/1:9,0:19:3.01:182,3,0	1/1:21,9:31:32.34:1375,32,0	1/1:16,0:16:3.01:70,3,0	1/1:17,0:28:5.46:312,5,0	1/1:11,14:29:20.19:1061,20,0	1/1:16,12:30:12.04:746,12,0	0/0:34,0:34:57.13:0,57,1800	0/0:15,0:15:11.16:0,11,1132	1/1:9,10:20:10.85:609,11,0	1/1:13,0:13:21.03:817,21,0	1/1:26,0:26:43.74:1301,44,0	1/1:19,7:28:16.51:877,17,0	1/1:24,0:22:3.47:26,3,0	1/1:16,0:16:9.03:233,9,0	1/1:16,0:16:12.04:533,12,0	0/1:18,0:18:1.39:393,0,1	1/1:17,0:23:6.02:365,6,0	1/1:27,0:25:47.94:1569,48,0	1/1:22,0:22:23.93:756,24,0	1/1:6,0:6:9.03:352,9,0
chr10	23872568	.	TA	T	7422.30	PASS	AB=0.857;AC=49;AF=0.907;AN=54;BaseQRankSum=7.294;DP=445;FS=0.000;HRun=10;HaplotypeScore=53.0482;InbreedingCoeff=0.7387;MQ=65.69;MQ0=0;MQRankSum=-2.052;QD=18.06;ReadPosRankSum=0.253;VQSLOD=5.1760;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,0:21:32.59:96,33,0	1/1:0,5:5:12:104,12,0	0/1:5,1:5:16.63:17,0,52	./.	1/1:0,23:23:59.98:520,60,0	1/1:2,18:19:47.99:417,48,0	1/1:2,15:18:38.03:318,38,0	1/1:5,23:28:68.92:591,69,0	1/1:1,18:19:44.99:391,45,0	1/1:1,26:27:71.96:622,72,0	1/1:1,18:19:41.96:364,42,0	1/1:2,8:10:23.99:208,24,0	1/1:4,11:15:32.99:286,33,0	1/1:1,11:12:29.98:260,30,0	0/0:14,0:14:27.42:0,27,387	0/0:15,0:15:39.09:0,39,423	1/1:1,18:19:47.99:417,48,0	1/1:3,9:12:23.99:208,24,0	1/1:2,13:15:9.52:306,10,0	1/1:1,16:17:41.99:364,42,0	1/1:2,13:15:38.03:318,38,0	1/1:2,9:11:23.99:208,24,0	1/1:3,20:23:53.96:469,54,0	1/1:0,10:10:29.99:260,30,0	1/1:1,18:19:53.99:469,54,0	1/1:2,0:21:31.45:100,31,0	1/1:2,0:17:26.48:78,26,0	1/1:0,0:9:10.19:30,10,0
chr10	23873016	.	AAAG	A	1997.54	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=8.210;DP=503;FS=1.251;HRun=0;HaplotypeScore=104.9864;InbreedingCoeff=0.9849;MQ=69.19;MQ0=0;MQRankSum=-2.799;QD=35.04;ReadPosRankSum=3.994;VQSLOD=3.9153;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,15:16:39.13:609,39,0	0/0:14,0:14:36.10:0,36,727	0/0:10,0:10:20.99:0,21,276	0/0:10,0:10:12.04:0,12,251	0/0:22,0:22:60.13:0,60,1148	0/0:20,0:20:51.17:0,51,1052	0/0:17,0:17:48.16:0,48,1011	0/0:30,0:30:75.26:0,75,1611	0/0:9,0:9:24.08:0,24,516	0/0:21,0:21:60.21:0,60,1270	0/0:24,0:24:63.17:0,63,1284	0/0:19,0:19:48.16:0,48,1038	0/0:28,0:28:72.20:0,72,1447	0/0:14,0:14:36.12:0,36,777	0/0:24,0:24:60.21:0,60,1283	0/0:19,0:19:54.19:0,54,1163	0/0:14,0:14:39.13:0,39,844	0/0:5,0:5:15.05:0,15,321	0/0:21,0:21:63.22:0,63,1345	0/0:21,0:21:57.20:0,57,1227	0/0:15,0:15:36.12:0,36,729	0/0:18,0:18:54.18:0,54,1115	0/0:28,0:28:81.28:0,81,1736	0/0:15,0:15:36.12:0,36,747	0/0:28,0:28:78.19:0,78,1572	1/1:2,9:11:27.09:422,27,0	1/1:2,17:19:39.13:610,39,0	1/1:0,11:11:33.11:516,33,0
chr10	23873149	.	C	CA	270.89	PASS	AB=0.950;AC=18;AF=0.474;AN=38;BaseQRankSum=3.694;DP=143;FS=4.012;HRun=0;HaplotypeScore=23.1825;InbreedingCoeff=0.2867;MQ=101.59;MQ0=18;MQRankSum=-2.262;QD=6.95;ReadPosRankSum=-4.231;VQSLOD=2.1135;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,4:5:6.02:69,6,0	./.	0/0:23,0:18:47.46:0,47,625	0/0:26,0:20:57.16:0,57,770	0/1:5,0:4:2.05:37,0,2	./.	./.	./.	1/1:1,0:1:3.01:44,3,0	0/0:2,0:1:2.68:0,3,11	1/1:3,0:1:0.47:1,0,0	1/1:1,0:1:2.97:20,3,0	1/1:1,0:1:0.47:1,0,0	./.	0/0:21,0:19:57.15:0,57,775	0/0:14,0:14:42.10:0,42,561	0/0:4,1:2:2.68:0,3,11	./.	0/1:5,0:5:21.76:38,0,22	1/1:4,0:2:5.99:49,6,0	0/1:7,0:6:4.48:76,0,4	1/1:3,0:3:3.45:22,3,0	0/0:1,0:1:2.74:0,3,12	./.	0/0:2,0:2:2.60:0,3,10	0/1:3,1:3:22.96:38,0,23	./.	./.
chr10	23882071	.	CTATT	C	6552.21	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=16.196;DP=611;FS=20.146;HRun=0;HaplotypeScore=166.4030;InbreedingCoeff=0.9972;MQ=68.30;MQ0=0;MQRankSum=-2.554;QD=15.03;ReadPosRankSum=3.407;VQSLOD=3.3608;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,99,2241	1/1:10,0:10:26.60:170,27,0	0/0:14,0:12:29.93:0,30,586	0/0:17,0:17:41.28:0,41,649	1/1:29,1:30:76.98:546,77,0	1/1:26,0:26:73.95:488,74,0	1/1:24,0:23:38.41:246,38,0	1/1:31,0:31:78.07:525,78,0	1/1:14,0:14:35.49:230,35,0	1/1:25,0:25:58.50:384,58,0	1/1:18,1:19:44.48:337,44,0	1/1:28,0:28:50.25:324,50,0	1/1:17,0:17:35.47:228,35,0	1/1:28,0:28:47.13:303,47,0	0/0:25,0:25:69.18:0,69,1610	0/0:20,0:20:38.05:0,38,1232	1/1:22,0:22:50.25:323,50,0	1/1:11,1:12:20.75:169,21,0	1/1:26,0:26:59.49:410,59,0	1/1:25,1:26:68.13:481,68,0	1/1:12,0:12:23.65:152,24,0	1/1:26,0:26:65.05:418,65,0	1/1:20,0:20:38.07:265,38,0	1/1:17,0:17:38.45:249,38,0	1/1:23,0:23:47.28:305,47,0	0/0:21,0:21:63.17:0,63,1302	0/0:36,0:36:99:0,108,2455	0/0:6,0:6:18.06:0,18,451
chr10	23882074	.	TTTA	T	15944.62	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=15.226;DP=622;FS=16.132;HRun=0;HaplotypeScore=122.0704;InbreedingCoeff=0.9922;MQ=68.96;MQ0=0;MQRankSum=-5.205;QD=36.40;ReadPosRankSum=3.550;VQSLOD=5.1181;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,105,1970	1/1:0,10:10:27.09:457,27,0	0/0:14,0:11:32.61:0,33,499	0/0:21,0:18:31.88:0,32,553	1/1:1,28:29:78.12:1165,78,0	1/1:0,26:26:75.26:1273,75,0	1/1:0,24:23:42.10:682,42,0	1/1:1,29:30:90.02:1208,90,0	1/1:1,15:16:36.12:611,36,0	1/1:3,20:23:59.37:895,59,0	1/1:1,18:19:45.02:649,45,0	1/1:1,26:27:51.17:865,51,0	1/1:3,15:18:36.12:612,36,0	1/1:3,26:29:54.05:860,54,0	0/0:25,0:25:69.17:0,69,1332	0/0:20,1:21:12.12:0,12,1103	1/1:0,25:25:51.17:867,51,0	1/1:2,8:10:21.07:336,21,0	1/1:4,22:26:71.29:902,71,0	1/1:2,23:25:72.02:1020,72,0	1/1:1,10:11:24.08:408,24,0	1/1:1,26:27:66.14:1058,66,0	1/1:1,21:22:38.62:630,39,0	1/1:1,17:18:39.10:633,39,0	1/1:0,23:23:48.16:816,48,0	0/0:21,0:21:63.16:0,63,1091	0/0:40,0:40:99:0,120,2234	0/0:6,0:6:18.06:0,18,373
chr10	23882075	.	TTA	T	9211.27	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=16.195;DP=618;FS=15.053;HRun=0;HaplotypeScore=134.3830;InbreedingCoeff=0.9972;MQ=69.08;MQ0=0;MQRankSum=-4.039;QD=21.22;ReadPosRankSum=3.504;VQSLOD=4.8168;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,105,1592	1/1:10,0:10:27.02:248,27,0	0/0:14,0:11:29.68:0,30,401	0/0:22,0:19:46.73:0,47,508	1/1:30,0:30:77.91:683,78,0	1/1:26,0:26:75.08:698,75,0	1/1:24,0:23:42:380,42,0	1/1:30,0:30:89.04:746,89,0	1/1:15,0:15:36.04:333,36,0	1/1:22,0:22:59.25:524,59,0	1/1:19,0:19:44.93:393,45,0	1/1:26,0:26:51.05:470,51,0	1/1:17,0:17:36.04:334,36,0	1/1:26,2:28:53.28:496,53,0	0/0:24,0:24:69.16:0,69,1076	0/0:21,0:21:35.17:0,35,894	1/1:25,0:25:51.05:472,51,0	1/1:10,0:10:21.02:196,21,0	1/1:23,3:26:71.34:648,71,0	1/1:25,0:25:71.88:619,72,0	1/1:12,0:12:24.02:222,24,0	1/1:27,0:27:65.99:593,66,0	1/1:22,0:22:38.79:356,39,0	1/1:17,0:17:39.02:354,39,0	1/1:23,0:23:48.05:445,48,0	0/0:21,0:21:63.16:0,63,907	0/0:40,0:40:99:0,120,1813	0/0:6,0:6:18.06:0,18,299
chr10	23882327	.	A	AAAACC	25714.40	PASS	AB=1.000;AC=42;AF=0.750;AN=56;BaseQRankSum=-13.784;DP=770;FS=6.302;HRun=0;HaplotypeScore=124.4253;InbreedingCoeff=0.7461;MQ=77.44;MQ0=0;MQRankSum=-3.450;QD=41.95;ReadPosRankSum=-0.347;VQSLOD=4.7140;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:49,0:49:98.67:99,0,987	1/1:1,8:9:15.05:432,15,0	0/0:33,0:30:29.33:0,29,508	0/0:28,0:26:23.22:0,23,486	1/1:7,16:23:50.66:986,51,0	1/1:3,16:19:36.12:1049,36,0	1/1:5,25:31:49.99:1383,50,0	1/1:8,17:33:71.61:1260,72,0	1/1:7,24:32:60.21:1729,60,0	1/1:7,19:28:69.05:1216,69,0	1/1:10,18:29:50.80:1180,51,0	1/1:10,24:35:57.20:1638,57,0	1/1:7,22:30:63.22:1820,63,0	1/1:8,27:37:72.16:1944,72,0	0/0:27,0:27:60.15:0,60,1023	0/0:32,0:32:81.20:0,81,1376	1/1:7,26:35:57.20:1674,57,0	1/1:4,11:15:27.09:775,27,0	1/1:7,17:24:51.02:1067,51,0	1/1:4,20:25:51.06:1338,51,0	1/1:9,27:39:45.15:1314,45,0	1/1:9,17:28:47.78:1217,48,0	1/1:2,11:15:17.95:454,18,0	1/1:5,24:31:60.20:1762,60,0	1/1:4,20:26:45.15:1319,45,0	0/1:19,0:19:57.86:58,0,371	0/0:33,0:33:0.23:0,0,722	0/0:4,0:4:11.98:0,12,113
chr10	23882541	.	TA	T	16399.47	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=14.098;DP=741;FS=0.642;HRun=5;HaplotypeScore=108.2824;InbreedingCoeff=0.9952;MQ=82.21;MQ0=0;MQRankSum=-2.474;QD=30.65;ReadPosRankSum=1.645;VQSLOD=4.5445;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,138,1850	1/1:0,7:7:21.06:238,21,0	0/0:15,0:15:19.83:0,20,404	0/0:26,0:26:59.75:0,60,737	1/1:0,35:35:96.25:1089,96,0	1/1:0,24:24:69.20:783,69,0	1/1:3,23:26:57.16:647,57,0	1/1:2,21:23:63.15:695,63,0	1/1:0,28:28:81.23:919,81,0	1/1:3,30:33:90.26:1021,90,0	1/1:3,25:28:75.21:851,75,0	1/1:0,33:33:96.27:1089,96,0	1/1:0,38:38:99:1293,114,0	1/1:4,21:25:66.10:731,66,0	0/0:35,0:35:99:0,99,1354	0/0:23,1:24:35.18:0,35,852	1/1:0,24:24:69.20:783,69,0	1/1:0,26:26:75.21:851,75,0	1/1:1,18:19:51.14:578,51,0	1/1:1,37:38:84.23:953,84,0	1/1:4,23:27:66.19:749,66,0	1/1:0,30:30:87.25:987,87,0	1/1:2,14:16:38.85:442,39,0	1/1:1,26:27:75.21:851,75,0	1/1:0,28:28:75.21:851,75,0	0/0:29,2:31:22.21:0,22,1081	0/0:20,0:20:60.20:0,60,820	0/0:5,0:5:15.02:0,15,185
chr10	23883097	.	TA	T	10573.54	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=13.293;DP=614;FS=0.731;HRun=9;HaplotypeScore=129.4519;InbreedingCoeff=0.9873;MQ=78.29;MQ0=1;MQRankSum=-0.968;QD=23.55;ReadPosRankSum=3.076;VQSLOD=3.5714;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:66.13:0,66,728	1/1:0,11:11:30.02:274,30,0	0/0:20,0:20:39.02:0,39,421	0/0:7,0:7:18.04:0,18,198	1/1:3,23:26:63.02:576,63,0	1/1:2,27:29:69.03:631,69,0	1/1:4,19:23:51.02:467,51,0	1/1:5,30:35:89.97:813,90,0	1/1:1,23:24:60.03:549,60,0	1/1:3,23:26:72.02:654,72,0	1/1:1,25:26:72.02:654,72,0	1/1:3,23:26:69.04:631,69,0	1/1:0,23:23:66.04:604,66,0	1/1:2,16:18:45.02:412,45,0	0/0:32,0:32:87.26:0,87,1004	0/0:20,0:20:60.18:0,60,693	1/1:3,17:19:51.02:466,51,0	1/1:1,9:10:24.01:219,24,0	1/1:2,15:17:45.02:412,45,0	1/1:2,31:33:90.03:823,90,0	1/1:5,17:22:45.02:412,45,0	1/1:4,21:25:63.03:576,63,0	1/1:1,16:17:48.02:439,48,0	1/1:0,18:18:48.50:440,48,0	1/1:0,20:20:57.03:522,57,0	0/0:2,0:22:56.77:0,57,287	0/0:3,0:39:85.54:0,86,463	0/0:0,0:3:8.52:0,9,43
chr10	23883514	.	T	TA	9485.14	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-13.120;DP=437;FS=34.760;HRun=5;HaplotypeScore=35.5573;InbreedingCoeff=0.9795;MQ=80.80;MQ0=0;MQRankSum=-1.056;QD=32.26;ReadPosRankSum=-0.001;VQSLOD=2.2916;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:36.07:0,36,376	1/1:0,6:6:18.06:237,18,0	0/0:12,0:12:27.06:0,27,280	0/0:11,0:11:30.08:0,30,322	1/1:0,9:9:27.09:355,27,0	1/1:2,13:15:30.10:395,30,0	1/1:1,10:11:21.07:276,21,0	1/1:1,31:32:93.29:1210,93,0	1/1:0,15:15:39.13:513,39,0	1/1:1,17:18:51.17:671,51,0	1/1:1,18:19:54.09:688,54,0	1/1:1,19:20:45.15:592,45,0	1/1:4,18:22:54.18:711,54,0	1/1:2,16:18:36.12:474,36,0	0/0:21,0:21:51.11:0,51,540	0/0:16,0:16:48.12:0,48,515	1/1:3,14:17:39.13:513,39,0	1/1:2,5:7:11.94:135,12,0	1/1:4,18:22:54.18:710,54,0	1/1:0,15:15:45.08:568,45,0	1/1:0,12:12:24.08:316,24,0	1/1:1,3:4:9.03:118,9,0	1/1:0,6:6:17.97:214,18,0	1/1:4,6:10:18.06:237,18,0	1/1:0,16:16:42.14:553,42,0	0/0:25,0:25:72.18:0,72,768	0/0:31,0:31:87.20:0,87,925	0/0:14,0:14:42.07:0,42,439
chr10	23883754	.	ATATGTG	A	257.86	PASS	AB=0.894;AC=14;AF=0.368;AN=38;BaseQRankSum=2.105;DP=155;FS=4.354;HRun=0;HaplotypeScore=49.4857;InbreedingCoeff=0.1439;MQ=38.61;MQ0=19;MQRankSum=-0.887;QD=3.48;ReadPosRankSum=0.958;VQSLOD=1.1259;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:9,17:24:17.80:30,0,18	./.	./.	./.	0/0:3,0:2:0.89:0,1,2	0/0:5,0:4:5.90:0,6,40	0/1:3,0:1:0:0,0,0	0/0:26,0:22:20.77:0,21,146	0/0:1,0:1:3.01:0,3,30	0/1:3,0:3:0:0,0,0	./.	./.	./.	0/0:3,0:3:0.47:0,0,1	0/1:8,0:7:15.17:15,0,76	1/1:3,0:3:5.99:48,6,0	0/0:8,0:6:5.05:0,5,43	0/0:4,0:4:3.45:0,3,45	0/0:7,0:3:8.93:0,9,64	1/1:2,0:1:0.89:2,1,0	1/1:3,0:1:0.89:2,1,0	./.	./.	./.	0/0:10,0:9:5.99:0,6,50	0/1:5,0:6:45.73:82,0,46	0/1:14,0:14:65.65:140,0,66	1/1:3,0:4:5.72:46,6,0
chr10	23883756	.	ATGTGTGTG	A	709.30	PASS	AB=1.000;AC=13;AF=0.382;AN=34;BaseQRankSum=-1.101;DP=157;FS=6.064;HRun=0;HaplotypeScore=48.7867;InbreedingCoeff=0.4559;MQ=38.16;MQ0=20;MQRankSum=-0.180;QD=20.86;ReadPosRankSum=0.140;VQSLOD=1.3590;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:24:3.89:0,4,16	./.	./.	./.	0/0:3,0:2:0.89:0,1,2	0/0:5,0:4:2.84:0,3,14	0/1:3,0:1:0:0,0,0	0/0:25,0:21:0:0,0,0	1/1:1,0:1:2.84:14,3,0	0/0:3,0:3:2.88:0,3,15	./.	./.	./.	0/0:3,0:3:0.89:0,1,2	0/0:9,0:7:8.50:0,9,134	./.	0/0:9,0:7:2.47:0,2,24	0/0:4,0:4:2.69:0,3,74	./.	1/1:2,0:1:0.47:1,0,0	1/1:3,0:1:0.89:2,1,0	./.	./.	./.	0/0:10,0:9:0:0,0,1	1/1:2,4:6:12.04:256,12,0	1/1:7,7:14:17.68:364,18,0	1/1:3,1:4:12.03:175,12,0
chr10	23883819	.	TTC	T	281.48	PASS	AB=0.996;AC=22;AF=0.550;AN=40;BaseQRankSum=7.224;DP=375;FS=2.576;HRun=0;HaplotypeScore=92.7501;InbreedingCoeff=0.4870;MQ=50.09;MQ0=22;MQRankSum=-5.625;QD=1.57;ReadPosRankSum=0.362;VQSLOD=1.2580;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,1:34:66.08:0,66,1244	./.	0/0:56,0:11:2.51:0,3,358	0/1:59,1:20:23.21:23,0,420	0/1:11,0:11:0:0,0,0	./.	1/1:8,0:8:6.66:20,7,0	1/1:18,0:18:38.63:183,39,0	./.	1/1:3,0:3:6.75:21,7,0	./.	1/1:14,0:14:4.44:13,4,0	1/1:12,0:12:14.86:81,15,0	1/1:11,0:11:2.89:18,3,0	0/0:6,1:7:5.12:0,5,237	0/0:11,0:11:30.10:0,30,610	1/1:11,1:12:5.34:18,5,0	1/1:8,0:8:5.58:33,6,0	0/1:9,0:7:7.39:7,0,11	./.	./.	./.	1/1:8,0:8:0.89:2,1,0	0/1:5,0:5:0:0,0,0	./.	0/0:16,0:16:31.77:0,32,779	0/0:14,0:14:36.12:0,36,676	0/0:4,0:4:3.01:0,3,61
chr10	23883820	.	TCGTG	T	4603.74	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=7.360;DP=374;FS=26.739;HRun=0;HaplotypeScore=84.4166;InbreedingCoeff=0.8761;MQ=50.20;MQ0=22;MQRankSum=-8.623;QD=26.92;ReadPosRankSum=-7.157;VQSLOD=1.7247;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:33:65.84:0,66,1783	1/1:0,2:2:5.94:41,6,0	0/0:56,0:11:28.19:0,28,486	0/0:60,0:20:29.54:0,30,667	1/1:0,11:11:29.76:285,30,0	1/1:0,9:9:26.75:184,27,0	1/1:0,8:8:17.93:247,18,0	1/1:0,18:18:54.17:1079,54,0	1/1:1,8:9:23.76:162,24,0	1/1:0,3:3:9.03:187,9,0	1/1:1,6:7:14.84:100,15,0	1/1:0,14:14:41.68:408,42,0	1/1:0,12:12:32.90:444,33,0	1/1:0,11:11:26.75:197,27,0	0/0:7,0:7:12.62:0,13,361	0/0:11,0:11:30.10:0,30,868	1/1:1,11:12:17.90:206,18,0	1/1:1,7:8:9.03:188,9,0	1/1:2,6:6:15:234,15,0	1/1:0,9:9:23.75:160,24,0	1/1:0,5:5:8.90:60,9,0	1/1:0,4:4:11.87:80,12,0	1/1:0,8:8:17.85:162,18,0	1/1:0,5:5:2.97:20,3,0	1/1:0,8:8:23.74:159,24,0	0/0:16,0:16:47.23:0,47,1145	0/0:15,0:15:39.13:0,39,940	0/0:4,0:4:3.01:0,3,86
chr10	23884268	.	A	AC	14121.98	PASS	AB=0.636;AC=39;AF=0.696;AN=56;BaseQRankSum=16.096;DP=572;FS=3.046;HRun=5;HaplotypeScore=110.2551;InbreedingCoeff=0.9247;MQ=86.14;MQ0=0;MQRankSum=-3.858;QD=34.36;ReadPosRankSum=1.451;VQSLOD=3.9784;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:45.10:0,45,476	1/1:0,12:12:33.11:434,33,0	0/0:20,0:20:54.13:0,54,580	0/0:21,0:21:25.90:0,26,557	1/1:0,28:28:75.24:987,75,0	1/1:1,24:25:72.23:947,72,0	1/1:3,13:16:39.08:491,39,0	1/1:5,24:29:69.22:906,69,0	1/1:3,21:24:60.20:789,60,0	1/1:2,23:25:69.22:908,69,0	1/1:2,20:23:60.06:764,60,0	1/1:1,20:21:60.20:790,60,0	1/1:0,23:23:66.21:868,66,0	1/1:4,22:26:63.20:829,63,0	0/0:18,0:18:48.10:0,48,508	0/0:20,0:20:60.14:0,60,637	1/1:0,19:19:57.19:750,57,0	0/1:3,4:7:8.63:106,0,9	1/1:5,17:22:51.17:671,51,0	1/1:1,36:37:96.27:1242,96,0	1/1:1,10:11:30.10:394,30,0	1/1:2,10:12:27.09:355,27,0	1/1:0,13:13:39.13:512,39,0	1/1:0,17:17:51.17:671,51,0	1/1:1,20:21:54.18:710,54,0	0/0:28,1:29:41.73:0,42,799	0/0:26,0:26:75.19:0,75,805	0/0:9,0:9:27.07:0,27,289
chr10	23884508	.	G	GA	15237.54	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=13.476;DP=663;FS=4.532;HRun=6;HaplotypeScore=111.9825;InbreedingCoeff=0.9785;MQ=83.50;MQ0=0;MQRankSum=-2.906;QD=31.88;ReadPosRankSum=-0.436;VQSLOD=3.6239;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,102,1037	1/1:2,12:13:36.11:450,36,0	0/0:16,0:16:42.08:0,42,424	0/0:23,0:23:53.89:0,54,532	1/1:4,33:37:93.30:1170,93,0	1/1:3,18:21:51.16:642,51,0	1/1:2,12:14:33.11:415,33,0	1/1:6,37:43:99:1367,111,0	1/1:1,17:18:45.14:566,45,0	1/1:7,23:30:72.18:858,72,0	1/1:3,22:25:66.17:812,66,0	1/1:1,25:26:66.21:830,66,0	1/1:4,25:29:75.20:922,75,0	1/1:2,27:29:75.24:944,75,0	0/0:19,0:19:54.12:0,54,551	0/0:18,0:18:45.10:0,45,459	1/1:1,25:26:63.20:793,63,0	1/1:0,6:6:15.05:189,15,0	1/1:3,22:25:72.23:901,72,0	1/1:1,16:17:45.14:566,45,0	1/1:1,21:22:54.17:679,54,0	1/1:2,16:18:39.12:490,39,0	1/1:0,24:24:63.20:793,63,0	1/1:0,23:23:60.19:755,60,0	1/1:0,31:31:87.28:1094,87,0	0/0:26,2:28:5.69:0,6,684	0/0:27,0:27:75.10:0,75,742	0/0:12,0:12:36.08:0,36,367
chr10	23885253	.	AGTTTT	A	16216.28	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=9.380;DP=468;FS=14.801;HRun=0;HaplotypeScore=100.4265;InbreedingCoeff=0.9369;MQ=68.51;MQ0=0;MQRankSum=-6.014;QD=45.42;ReadPosRankSum=1.879;VQSLOD=4.2047;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:36.12:0,36,1051	1/1:1,5:6:12.04:244,12,0	0/0:8,0:8:24:0,24,586	0/0:8,0:8:21.07:0,21,491	1/1:5,32:37:84.29:1705,84,0	1/1:3,11:14:24.08:487,24,0	1/1:1,14:15:39.13:791,39,0	1/1:6,26:32:75.17:1338,75,0	1/1:0,10:10:21.07:426,21,0	1/1:2,17:19:48.15:938,48,0	1/1:3,24:27:69.24:1398,69,0	1/1:1,11:12:30.10:609,30,0	1/1:2,17:19:42.14:853,42,0	1/1:3,20:23:51.17:1035,51,0	0/0:21,0:21:57.20:0,57,1726	0/0:11,0:11:27.06:0,27,733	1/1:1,8:9:18.06:365,18,0	1/1:4,2:6:6.02:122,6,0	1/1:2,12:14:36.11:695,36,0	1/1:3,33:36:96.33:1948,96,0	1/1:1,7:8:12.04:220,12,0	1/1:0,12:12:30.10:609,30,0	1/1:3,30:33:72.25:1460,72,0	1/1:1,3:4:2.31:60,2,0	1/1:3,18:21:45.15:913,45,0	0/0:18,0:18:48.16:0,48,1379	0/0:22,0:22:63.21:0,63,1844	0/0:9,0:9:21.07:0,21,636
chr10	23887160	.	A	AACACACACAC	7300.09	PASS	AB=0.726;AC=46;AF=0.885;AN=52;BaseQRankSum=0.429;DP=637;FS=12.297;HRun=0;HaplotypeScore=204.4578;InbreedingCoeff=0.3573;MQ=55.29;MQ0=24;MQRankSum=-4.722;QD=14.31;ReadPosRankSum=-2.200;VQSLOD=2.5977;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:32:50.53:51,0,81	1/1:9,0:9:6.91:168,7,0	./.	./.	1/1:21,0:21:11.98:122,12,0	1/1:28,1:28:17.62:299,18,0	1/1:26,0:27:15.24:346,15,0	1/1:24,0:23:12.02:230,12,0	1/1:12,6:20:3.01:91,3,0	1/1:26,0:25:33.06:821,33,0	1/1:15,0:16:5.75:246,6,0	1/1:10,9:20:5.13:294,5,0	1/1:21,0:21:23.89:671,24,0	1/1:16,0:24:8.92:171,9,0	0/0:23,0:23:14.08:0,14,879	0/0:31,0:33:10.34:0,10,1409	1/1:24,1:22:6.91:706,7,0	1/1:12,0:12:14.26:374,14,0	1/1:16,0:16:17.38:384,17,0	1/1:20,0:20:14.93:410,15,0	1/1:11,0:11:3.01:95,3,0	1/1:13,1:19:21.01:456,21,0	1/1:25,1:25:11.99:409,12,0	1/1:15,7:22:2.48:8,2,0	1/1:15,0:26:6.02:192,6,0	1/1:15,0:29:36.54:558,37,0	0/1:12,0:24:7.64:157,0,8	1/1:3,0:3:5.93:40,6,0
chr10	23891565	.	TC	T	1247.72	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-3.978;DP=687;FS=2.303;HRun=1;HaplotypeScore=105.1879;InbreedingCoeff=0.9832;MQ=90.47;MQ0=0;MQRankSum=-5.215;QD=32.83;ReadPosRankSum=1.717;VQSLOD=3.5043;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,38:38:96.32:1343,96,0	0/0:10,0:10:30.10:0,30,480	0/0:28,0:28:82.98:0,83,1102	0/0:30,0:31:83.41:0,83,1254	0/0:28,0:28:84.27:0,84,1319	0/0:20,0:20:57.17:0,57,861	0/0:17,0:17:51.17:0,51,815	0/0:30,0:30:87.28:0,87,1350	0/0:28,0:28:84.24:0,84,1313	0/0:25,0:25:75.25:0,75,1180	0/0:18,0:18:54.18:0,54,863	0/0:14,0:14:42.13:0,42,647	0/0:38,0:38:99:0,111,1769	0/0:23,0:23:66.23:0,66,1052	0/0:42,0:42:99:0,126,1988	0/0:28,0:28:84.27:0,84,1318	0/0:18,0:18:54.18:0,54,863	0/0:12,0:11:30.10:0,30,479	0/0:11,0:11:33.10:0,33,507	0/0:33,0:33:99:0,99,1560	0/0:31,0:31:93.28:0,93,1438	0/0:23,0:23:69.24:0,69,1100	0/0:24,0:24:72.23:0,72,1112	0/0:31,0:31:90.24:0,90,1439	0/0:21,0:20:63.21:0,63,1007	0/0:26,0:26:78.27:0,78,1245	0/0:34,0:34:99:0,102,1606	0/0:5,0:5:15.05:0,15,240
chr10	23893212	.	TCA	T	2566.49	PASS	AB=0.951;AC=36;AF=0.667;AN=54;BaseQRankSum=1.969;DP=439;FS=41.807;HRun=0;HaplotypeScore=75.2632;InbreedingCoeff=0.0571;MQ=58.29;MQ0=19;MQRankSum=1.257;QD=7.17;ReadPosRankSum=4.197;VQSLOD=0.9876;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:20,0:18:34.72:35,0,261	1/1:3,0:3:2.68:11,3,0	./.	0/0:35,0:6:2.74:0,3,12	0/1:20,0:20:22.72:296,0,23	0/1:24,0:23:17.32:17,0,37	1/1:11,0:10:21.06:239,21,0	1/1:19,10:29:25.39:309,25,0	1/1:12,0:11:5.09:19,5,0	1/1:14,0:14:8.20:31,8,0	1/1:9,0:9:2.98:21,3,0	0/1:8,0:8:55.68:146,0,56	0/1:24,1:25:92.72:357,0,93	1/1:10,0:11:20.51:174,21,0	0/0:9,0:9:27.09:0,27,414	0/0:11,0:11:21.07:0,21,317	1/1:15,0:14:2.98:21,3,0	0/1:12,0:11:2.49:2,0,14	0/1:5,0:6:1.13:3,0,1	0/1:13,0:13:0:0,0,0	0/1:16,0:15:6.89:13,0,7	0/1:5,6:11:29.10:68,0,29	0/1:17,1:18:54.59:180,0,55	1/1:11,0:11:17.99:186,18,0	0/1:27,0:27:1.41:341,0,1	1/1:13,0:12:19.90:78,20,0	1/1:17,0:17:11.78:76,12,0	1/1:13,0:13:24.59:98,25,0
chr10	23893237	.	AACACACACACACAC	A	42.02	PASS	AC=4;AF=0.074;AN=54;BaseQRankSum=3.967;DP=484;FS=4.842;HRun=0;HaplotypeScore=178.9903;InbreedingCoeff=0.4615;MQ=52.69;MQ0=28;MQRankSum=-3.155;QD=0.93;ReadPosRankSum=-2.574;VQSLOD=2.2825;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:16,12:26:3:119,3,0	0/0:4,0:4:3.48:0,3,174	./.	0/0:29,0:2:0.89:0,1,2	0/0:23,0:23:32.11:0,32,1656	0/0:25,0:24:22.63:0,23,1039	0/0:12,0:11:18.52:0,19,561	0/0:27,0:25:21.84:0,22,253	0/0:15,0:14:11.98:0,12,584	0/0:16,0:14:14.92:0,15,414	0/0:8,0:8:3.01:0,3,131	0/0:9,0:9:14.84:0,15,739	0/0:26,0:26:52.71:0,53,2367	0/0:11,0:10:17.32:0,17,644	0/0:15,0:15:29.73:0,30,1547	0/0:13,0:13:33.11:0,33,1333	0/0:21,0:20:9.97:0,10,201	0/0:13,0:12:21.54:0,22,816	0/0:10,0:10:16.14:0,16,270	1/1:17,0:16:0.06:1,0,0	0/0:22,0:21:26.94:0,27,793	0/0:15,0:13:7.46:0,7,438	0/0:21,0:21:22.12:0,22,1167	0/0:16,0:15:12.04:0,12,478	0/0:24,0:24:28.77:0,29,898	0/0:20,0:17:36.70:0,37,636	0/0:15,0:15:7.55:0,8,190	0/0:11,0:11:8.26:0,8,155
chr10	23893808	.	GT	G	10744.06	PASS	AB=1.000;AC=41;AF=0.732;AN=56;BaseQRankSum=6.159;DP=647;FS=0.367;HRun=10;HaplotypeScore=70.4442;InbreedingCoeff=0.8831;MQ=69.58;MQ0=0;MQRankSum=-0.754;QD=21.57;ReadPosRankSum=0.797;VQSLOD=5.6832;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:3,0:22:48.33:0,48,242	1/1:1,9:10:29.99:260,30,0	0/0:9,0:7:14.87:0,15,135	0/1:11,0:10:15.12:15,0,31	1/1:4,24:28:74.97:651,75,0	1/1:5,36:41:71.80:852,72,0	1/1:3,27:30:77.98:677,78,0	1/1:10,29:39:83.93:725,84,0	1/1:2,15:17:47.99:416,48,0	1/1:7,13:20:38.97:338,39,0	1/1:3,18:21:56.91:489,57,0	1/1:5,18:23:53.98:469,54,0	1/1:2,20:22:59.98:521,60,0	1/1:5,29:35:95:813,95,0	0/0:23,0:23:63.16:0,63,688	0/0:30,0:30:87.22:0,87,950	1/1:2,25:27:74.96:646,75,0	1/1:3,6:9:21:186,21,0	1/1:7,18:25:53.96:469,54,0	1/1:4,26:30:77.96:677,78,0	1/1:3,18:21:59.98:521,60,0	1/1:4,16:20:50.94:434,51,0	1/1:6,18:24:59.96:517,60,0	1/1:1,20:21:53.99:469,54,0	1/1:1,23:24:68.98:599,69,0	0/0:29,3:32:6.01:0,6,730	0/0:26,0:25:69.19:0,69,763	0/0:7,0:7:12.03:0,12,133
chr10	23893897	.	A	AG	19115.52	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-13.412;DP=629;FS=5.709;HRun=1;HaplotypeScore=59.1297;InbreedingCoeff=0.9973;MQ=83.48;MQ0=0;MQRankSum=-2.723;QD=41.47;ReadPosRankSum=1.339;VQSLOD=5.3023;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:69.17:0,69,876	1/1:2,11:13:39.12:565,39,0	0/0:24,0:24:59.52:0,60,766	0/0:12,0:12:36.11:0,36,458	1/1:0,19:19:57.19:852,57,0	1/1:2,22:24:69.17:1005,69,0	1/1:0,23:23:66.22:988,66,0	1/1:1,34:35:99:1423,99,0	1/1:1,14:15:42.14:629,42,0	1/1:0,22:22:66.22:988,66,0	1/1:1,19:20:57.19:851,57,0	1/1:0,22:22:66.22:989,66,0	1/1:2,26:28:81.27:1207,81,0	1/1:4,26:30:75.25:1122,75,0	0/0:21,0:21:63.20:0,63,818	0/0:18,0:18:54.18:0,54,701	1/1:5,14:19:51.13:719,51,0	1/1:0,14:14:36.12:539,36,0	1/1:1,17:18:51.16:743,51,0	1/1:3,32:35:93.27:1365,93,0	1/1:1,25:26:72.23:1057,72,0	1/1:2,35:37:99:1464,99,0	1/1:1,23:24:66.22:989,66,0	1/1:3,12:15:45.12:632,45,0	1/1:1,21:22:66.22:987,66,0	0/0:21,1:22:18.22:0,18,708	0/0:40,0:40:99:0,120,1553	0/0:6,0:6:18.06:0,18,234
chr10	23897438	.	CTT	C	6199.19	PASS	AB=0.576;AC=27;AF=0.482;AN=56;BaseQRankSum=-4.614;DP=599;FS=14.627;HRun=11;HaplotypeScore=85.3976;InbreedingCoeff=0.9151;MQ=76.08;MQ0=4;MQRankSum=-1.129;QD=21.83;ReadPosRankSum=2.352;VQSLOD=2.6875;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:20:35.44:0,35,136	1/1:1,7:8:21.05:223,21,0	0/0:42,0:23:41.38:0,41,447	0/0:23,0:14:20.05:0,20,245	1/1:5,21:27:54.06:630,54,0	1/1:3,26:29:69.16:734,69,0	1/1:0,16:16:42.11:447,42,0	1/1:8,31:39:87.07:909,87,0	1/1:1,16:17:39.10:415,39,0	0/0:7,0:23:39.25:0,39,136	0/0:2,0:23:52.64:0,53,216	1/1:1,17:18:39.10:415,39,0	1/1:1,18:19:45.11:479,45,0	1/1:2,14:16:27.02:343,27,0	0/0:18,0:17:51.17:0,51,767	0/0:12,0:12:33.09:0,33,468	0/0:8,0:24:38.84:0,39,212	0/1:5,1:19:6.74:7,0,50	0/0:5,0:16:34.21:0,34,203	0/0:6,1:33:32.72:0,33,216	0/0:2,0:11:22.46:0,22,77	1/1:5,12:17:30.06:319,30,0	1/1:6,15:21:36.07:383,36,0	1/1:3,14:17:36.07:383,36,0	1/1:1,19:20:48.12:511,48,0	0/0:21,0:24:61.65:0,62,816	0/0:44,0:43:99:0,126,1855	0/0:2,0:2:3.01:0,3,46
chr10	23899739	.	TA	T	5911.62	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=12.751;DP=580;FS=14.471;HRun=10;HaplotypeScore=57.8470;InbreedingCoeff=0.9864;MQ=78.85;MQ0=0;MQRankSum=-0.208;QD=21.34;ReadPosRankSum=3.480;VQSLOD=4.5783;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:42.11:0,42,463	1/1:0,7:7:15:130,15,0	0/0:12,1:12:7.90:0,8,173	0/0:15,0:16:22.98:0,23,211	1/1:2,29:31:80.97:703,81,0	1/1:0,23:23:65.99:573,66,0	1/1:2,20:22:36.49:471,36,0	1/1:10,33:43:95.91:824,96,0	1/1:3,15:18:41.99:365,42,0	0/0:30,0:30:69.18:0,69,756	0/0:26,0:26:69.19:0,69,763	1/1:3,19:22:53.99:469,54,0	1/1:4,22:26:59.98:521,60,0	1/1:3,24:27:68.97:599,69,0	0/0:20,0:21:60:0,60,645	0/0:21,0:21:63.17:0,63,697	0/0:15,0:15:33.09:0,33,365	0/0:9,0:9:21.06:0,21,231	0/0:20,0:20:48.13:0,48,530	0/0:28,0:28:72.15:0,72,783	0/0:15,0:15:42.06:0,42,437	1/1:1,10:11:29.99:260,30,0	1/1:2,19:21:53.99:469,54,0	1/1:3,8:11:23.99:208,24,0	1/1:1,13:15:38.03:319,38,0	0/0:23,0:23:60.16:0,60,657	0/0:35,2:37:44.12:0,44,931	0/0:14,0:14:30.08:0,30,332
chr10	23901510	.	GGAAGAAGAAGAA	G	378.22	PASS	AB=1.000;AC=20;AF=0.455;AN=44;BaseQRankSum=3.056;DP=520;FS=7.797;HRun=0;HaplotypeScore=148.1646;InbreedingCoeff=0.1405;MQ=48.33;MQ0=52;MQRankSum=2.235;QD=1.38;ReadPosRankSum=-2.889;VQSLOD=1.6247;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:18:6.02:0,6,74	./.	./.	./.	./.	0/1:21,0:18:10.49:10,0,36	0/0:11,0:8:2.92:0,3,17	./.	0/1:17,0:15:7.73:79,0,8	0/1:28,0:22:5.55:6,0,16	0/0:18,0:15:1.25:0,1,3	1/1:33,0:25:5.98:94,6,0	1/1:19,0:18:6:62,6,0	0/1:16,0:13:10.46:10,0,15	0/0:23,0:19:21.07:0,21,393	0/0:18,0:18:15.05:0,15,338	1/1:31,0:27:1.38:4,1,0	1/1:16,0:13:3.01:58,3,0	0/0:13,0:10:4.98:0,5,24	0/0:22,0:26:12.80:0,13,105	0/0:11,0:9:0:0,0,0	1/1:8,8:16:2.75:51,3,0	1/1:14,0:13:2.85:36,3,0	0/1:23,0:20:47.85:54,0,48	0/1:32,0:29:34.67:35,0,126	0/0:12,0:11:2.22:0,2,7	./.	1/1:9,0:7:2.60:10,3,0
chr10	23903307	.	G	GTT	14492.22	PASS	AB=0.556;AC=47;AF=0.839;AN=56;BaseQRankSum=3.128;DP=545;FS=4.195;HRun=9;HaplotypeScore=78.2575;InbreedingCoeff=0.8778;MQ=78.89;MQ0=0;MQRankSum=-4.467;QD=30.19;ReadPosRankSum=1.262;VQSLOD=5.2029;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,0:21:32.44:111,32,0	1/1:0,4:5:14.54:193,15,0	0/0:21,0:21:10.04:0,10,431	0/0:8,0:9:20.07:0,20,192	1/1:3,23:27:63.21:952,63,0	1/1:4,16:21:40.38:603,40,0	1/1:3,14:17:30.10:462,30,0	1/1:5,35:40:99:1585,111,0	1/1:2,7:9:18.06:277,18,0	1/1:4,26:30:75.23:1127,75,0	1/1:3,17:20:42.14:647,42,0	1/1:1,19:20:51.17:785,51,0	1/1:1,21:22:57.19:876,57,0	1/1:2,12:15:27.08:395,27,0	0/0:23,0:23:63.14:0,63,671	0/0:12,0:12:30.06:0,30,312	1/1:1,19:22:56.68:839,57,0	1/1:3,8:12:24.08:352,24,0	1/1:7,21:28:63.16:897,63,0	1/1:1,29:30:90.09:1237,90,0	1/1:2,10:13:20.56:286,21,0	1/1:3,12:15:30.10:462,30,0	1/1:1,13:14:33.11:508,33,0	1/1:0,8:8:18.06:277,18,0	1/1:5,26:31:81.27:1229,81,0	1/1:2,0:22:47.59:165,48,0	1/1:2,0:20:45.42:171,45,0	0/1:3,0:15:3.97:58,0,4
chr10	23904607	.	A	AC	1396.28	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-8.032;DP=544;FS=1.298;HRun=5;HaplotypeScore=71.7849;InbreedingCoeff=0.9899;MQ=78.84;MQ0=0;MQRankSum=-4.857;QD=30.35;ReadPosRankSum=0.214;VQSLOD=4.1605;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:27.07:0,27,290	0/0:9,0:9:24.06:0,24,258	0/0:23,0:21:20.25:0,20,401	0/0:16,0:16:35.84:0,36,352	0/0:25,0:25:69.15:0,69,733	0/0:15,0:15:45.10:0,45,476	0/0:9,0:9:27.07:0,27,290	0/0:26,0:26:57.13:0,57,606	0/0:19,0:19:54.12:0,54,572	0/0:26,0:26:75.19:0,75,806	0/0:31,0:31:84.19:0,84,894	0/0:13,0:13:36.09:0,36,387	0/0:20,0:20:51.10:0,51,537	0/0:18,0:18:51.13:0,51,548	0/0:21,0:21:48.12:0,48,516	0/0:24,0:24:69.17:0,69,742	0/0:11,0:11:33.08:0,33,355	0/0:10,0:10:27.07:0,27,290	0/0:10,0:10:27.04:0,27,280	0/0:38,0:38:99:0,111,1193	0/0:10,0:10:30.08:0,30,322	0/0:34,0:34:99:0,99,1056	0/0:36,0:36:93.23:0,93,1000	0/0:11,0:11:33.08:0,33,354	0/0:34,0:34:99:0,99,1064	1/1:2,12:14:36.12:471,36,0	1/1:1,25:26:66.21:868,66,0	1/1:0,6:6:15.05:197,15,0
chr10	23908429	.	G	GCA	99.59	PASS	AB=1.000;AC=8;AF=0.154;AN=52;BaseQRankSum=-0.773;DP=448;FS=27.211;HRun=0;HaplotypeScore=113.8230;InbreedingCoeff=0.1847;MQ=50.42;MQ0=16;MQRankSum=-0.748;QD=0.91;ReadPosRankSum=1.965;VQSLOD=0.5740;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:27:7.24:65,7,0	0/0:8,0:8:2.90:0,3,30	./.	./.	0/0:22,0:22:6.66:0,7,94	0/0:18,0:18:5.91:0,6,48	0/0:17,0:17:5.95:0,6,49	0/0:18,0:18:2.60:0,3,10	0/1:10,0:10:2.98:3,0,44	0/0:11,0:10:5.71:0,6,26	0/0:17,0:17:2.80:0,3,13	0/0:20,0:20:19.81:0,20,100	0/0:12,0:12:10.34:0,10,47	0/0:23,0:22:8.54:0,9,43	1/1:10,5:16:6.01:70,6,0	0/0:8,0:5:5.94:0,6,56	0/0:19,0:16:10.79:0,11,52	0/1:19,0:19:32.68:33,0,40	0/1:15,0:14:4.08:40,0,4	0/0:13,0:12:0.47:0,0,1	0/0:27,0:26:2.88:0,3,15	0/0:10,0:10:2.84:0,3,14	0/0:5,0:5:2.99:0,3,24	0/0:19,0:17:2.22:0,2,15	0/1:21,0:19:6.97:7,0,20	0/0:13,0:12:20.20:0,20,116	0/0:16,0:16:12.13:0,12,81	0/0:10,0:10:8.52:0,9,42
chr10	23908472	.	CACACACAG	C	6463.50	PASS	AB=0.986;AC=36;AF=0.643;AN=56;BaseQRankSum=0.195;DP=565;FS=14.152;HRun=0;HaplotypeScore=154.5841;InbreedingCoeff=0.4270;MQ=52.84;MQ0=32;MQRankSum=-0.159;QD=14.40;ReadPosRankSum=1.707;VQSLOD=3.2721;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:34,0:31:91.60:232,0,92	0/1:5,0:5:1.60:39,0,2	0/0:24,0:13:16.41:0,16,222	0/0:27,0:11:16.15:0,16,201	0/1:23,1:24:3.40:211,0,3	1/1:21,0:21:33.19:237,33,0	1/1:22,0:21:31.04:276,31,0	1/1:26,0:26:11.78:500,12,0	1/1:14,0:13:14.22:168,14,0	1/1:15,1:15:33.65:378,34,0	1/1:22,3:24:20.69:272,21,0	1/1:20,1:21:11.75:440,12,0	1/1:16,1:17:3.69:475,4,0	0/1:25,2:26:26.50:281,0,27	0/0:17,0:15:27.02:0,27,522	0/1:12,0:9:3.90:4,0,385	1/1:20,3:21:39.30:496,39,0	1/1:19,3:23:5.92:618,6,0	1/1:15,0:14:17.03:492,17,0	1/1:15,1:15:35.89:372,36,0	1/1:30,1:28:35.75:295,36,0	0/1:12,0:11:16.25:16,0,26	0/1:12,0:10:0.06:105,0,0	0/1:20,0:18:18.18:97,0,18	1/1:29,4:31:53.91:459,54,0	0/0:24,0:22:65.19:0,65,858	0/0:18,0:18:49.25:0,49,724	0/0:6,0:3:9.02:0,9,144
chr10	23908474	.	CACACAG	C	7631.79	PASS	AB=1.000;AC=42;AF=0.750;AN=56;BaseQRankSum=2.151;DP=571;FS=10.945;HRun=0;HaplotypeScore=138.1757;InbreedingCoeff=0.7390;MQ=55.92;MQ0=31;MQRankSum=-0.824;QD=17.04;ReadPosRankSum=2.298;VQSLOD=3.9776;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:30:40.48:274,0,40	1/1:4,2:6:8.78:86,9,0	0/0:27,0:15:21.64:0,22,281	0/0:28,0:13:8.17:0,8,188	1/1:21,3:24:19.04:325,19,0	1/1:14,6:20:32.87:362,33,0	1/1:22,0:21:44.97:481,45,0	1/1:27,0:27:45.35:582,45,0	1/1:12,2:13:26.96:336,27,0	1/1:16,0:15:33.27:301,33,0	1/1:24,0:23:11.03:259,11,0	1/1:18,2:20:40.38:588,40,0	1/1:16,1:17:42.77:595,43,0	1/1:21,5:25:38.83:464,39,0	0/0:19,0:17:33.02:0,33,483	0/1:12,0:9:3.90:4,0,295	1/1:24,0:22:44.61:487,45,0	1/1:20,1:22:20.07:471,20,0	1/1:16,0:15:22.05:435,22,0	1/1:16,0:15:35.88:324,36,0	1/1:32,0:29:32.98:293,33,0	1/1:12,0:11:5.87:40,6,0	1/1:11,1:10:17.99:173,18,0	1/1:19,1:18:9.51:168,10,0	1/1:29,4:31:54:584,54,0	0/0:25,0:23:54.29:0,54,648	0/0:18,0:18:50.04:0,50,594	0/0:5,0:3:2.02:0,2,54
chr10	23908476	.	CACAG	C	6638.08	PASS	AB=1.000;AC=43;AF=0.768;AN=56;BaseQRankSum=4.259;DP=560;FS=6.999;HRun=0;HaplotypeScore=123.5441;InbreedingCoeff=0.7996;MQ=58.34;MQ0=30;MQRankSum=-1.538;QD=15.62;ReadPosRankSum=1.959;VQSLOD=3.9820;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:32,0:29:13.68:277,14,0	1/1:6,0:6:7.81:54,8,0	0/0:29,0:17:13.51:0,14,268	0/0:31,0:15:13.35:0,13,258	1/1:22,0:22:20.86:229,21,0	1/1:17,2:19:32.80:287,33,0	1/1:21,1:21:47.45:395,47,0	1/1:26,0:26:52.22:591,52,0	1/1:13,1:13:26.74:268,27,0	1/1:16,0:15:37.16:309,37,0	1/1:20,2:21:29.86:279,30,0	1/1:21,0:21:41.59:509,42,0	1/1:17,0:17:18.68:449,19,0	1/1:23,0:22:38.83:354,39,0	0/0:19,0:17:33.01:0,33,391	0/0:14,0:11:2.09:0,2,254	1/1:24,0:23:47.74:450,48,0	1/1:22,0:22:32.92:409,33,0	1/1:13,2:14:38.66:353,39,0	1/1:16,0:15:33.42:289,33,0	1/1:28,0:26:32.81:265,33,0	1/1:3,8:10:5.98:85,6,0	1/1:12,0:10:10:116,10,0	1/1:19,0:17:11.16:118,11,0	1/1:33,0:31:54:508,54,0	0/0:24,0:22:29.22:0,29,473	0/0:18,0:18:26.46:0,26,405	0/1:5,0:3:13.82:45,0,14
chr10	23908478	.	CAG	C	6212.49	PASS	AB=1.000;AC=43;AF=0.768;AN=56;BaseQRankSum=5.542;DP=553;FS=13.777;HRun=0;HaplotypeScore=110.7143;InbreedingCoeff=0.8536;MQ=60.95;MQ0=29;MQRankSum=-1.130;QD=15.01;ReadPosRankSum=2.522;VQSLOD=4.1808;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:33,0:30:46.36:358,46,0	1/1:5,1:6:6.76:49,7,0	0/0:30,0:18:16.40:0,16,304	0/0:36,0:20:28.15:0,28,380	1/1:22,1:23:30.38:275,30,0	1/1:19,0:19:31.62:251,32,0	1/1:21,0:20:45.38:375,45,0	1/1:26,0:26:64.08:609,64,0	1/1:14,0:13:26.95:234,27,0	1/1:17,0:16:42.17:347,42,0	1/1:21,1:21:29.86:252,30,0	1/1:20,1:21:41.30:388,41,0	1/1:16,0:16:38.99:349,39,0	1/1:22,0:21:38.81:320,39,0	0/0:18,1:17:29.99:0,30,288	0/0:14,0:12:0.90:0,1,203	1/1:23,0:22:47.72:383,48,0	1/1:19,0:19:47.67:366,48,0	1/1:14,1:14:41.35:361,41,0	1/1:13,0:12:29.95:245,30,0	1/1:28,0:26:29.97:252,30,0	1/1:10,0:9:5.80:52,6,0	1/1:11,0:9:14.97:123,15,0	1/1:16,0:15:11.90:116,12,0	1/1:33,1:32:56.98:505,57,0	0/0:24,0:22:38.66:0,39,394	0/0:16,0:16:24.27:0,24,291	0/1:5,0:3:2.88:3,0,3
chr10	23908531	.	AT	A	6612.74	PASS	AB=0.563;AC=39;AF=0.696;AN=56;BaseQRankSum=7.100;DP=412;FS=15.785;HRun=8;HaplotypeScore=55.9088;InbreedingCoeff=0.8578;MQ=73.23;MQ0=0;MQRankSum=-0.095;QD=22.72;ReadPosRankSum=-0.793;VQSLOD=3.3834;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:69.21:0,69,833	1/1:1,3:4:9.01:87,9,0	0/0:10,0:8:6.02:0,6,71	0/0:15,0:12:18.76:0,19,172	1/1:1,18:19:54.01:509,54,0	1/1:1,12:13:30.05:290,30,0	1/1:2,9:11:21.03:203,21,0	1/1:4,26:30:78.06:737,78,0	0/1:2,7:9:15.18:153,0,15	1/1:0,12:12:35.73:329,36,0	1/1:2,14:16:39.01:367,39,0	1/1:0,17:17:48.08:463,48,0	1/1:1,14:15:33.05:319,33,0	1/1:2,10:12:23.72:231,24,0	0/0:8,0:8:21.06:0,21,254	0/0:15,0:15:16.34:0,16,478	1/1:2,23:26:63.10:608,63,0	1/1:1,15:16:42.07:405,42,0	1/1:4,14:18:38.97:354,39,0	1/1:1,15:16:42.06:405,42,0	1/1:1,4:5:6.01:58,6,0	1/1:2,3:5:12.01:110,12,0	1/1:2,6:8:15.02:145,15,0	1/1:1,8:9:15.02:145,15,0	1/1:2,28:30:72.11:695,72,0	0/0:19,0:19:51.15:0,51,606	0/0:20,0:20:54.17:0,54,651	0/0:5,0:5:15.05:0,15,181
chr10	23910309	.	G	GACAACAACAACA	24128.90	PASS	AB=1.000;AC=43;AF=0.768;AN=56;BaseQRankSum=-0.942;DP=538;FS=1.230;HRun=0;HaplotypeScore=164.6798;InbreedingCoeff=0.7884;MQ=55.55;MQ0=1;MQRankSum=-8.976;QD=56.64;ReadPosRankSum=-3.592;VQSLOD=4.2356;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:15:12.63:202,13,0	1/1:6,4:10:15.05:654,15,0	0/0:18,0:8:6.02:0,6,154	0/0:20,0:17:0.89:0,1,400	1/1:15,16:36:63.09:2264,63,0	1/1:11,17:30:54.19:3063,54,0	1/1:11,0:11:14.90:347,15,0	1/1:44,0:43:57.61:1732,58,0	1/1:3,8:12:15.05:739,15,0	1/1:11,9:24:32.83:1040,33,0	1/1:6,10:18:33.11:1739,33,0	1/1:11,0:19:36.12:1655,36,0	1/1:9,6:18:12.04:541,12,0	1/1:11,9:26:18.06:913,18,0	0/0:16,0:16:42.12:0,42,1331	0/0:16,0:16:21.07:0,21,729	1/1:9,8:19:18.06:994,18,0	1/1:6,6:13:15.05:879,15,0	1/1:13,9:24:44.99:1756,45,0	1/1:22,7:30:59.65:1882,60,0	1/1:4,0:4:4.26:69,4,0	1/1:2,6:8:18.06:969,18,0	1/1:8,12:23:27.04:1399,27,0	1/1:6,0:7:3.01:94,3,0	1/1:11,13:27:24.08:1196,24,0	0/0:17,0:17:24.07:0,24,678	0/0:25,0:23:36.12:0,36,1179	0/1:7,0:7:2.24:2,0,604
chr10	23910335	.	C	CAACAACAACAACAACAACAAG	10659.58	PASS	AB=1.000;AC=22;AF=0.393;AN=56;BaseQRankSum=12.627;DP=452;FS=1.269;HRun=0;HaplotypeScore=248.9705;InbreedingCoeff=-0.5194;MQ=61.58;MQ0=1;MQRankSum=-9.501;QD=30.11;ReadPosRankSum=3.937;VQSLOD=3.5433;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:5,2:15:5.53:314,6,0	0/1:5,0:5:35.95:94,0,36	0/0:16,0:9:26.76:0,27,407	0/0:17,0:16:29.33:0,29,666	0/1:31,0:30:99:836,0,246	0/1:23,0:23:92.72:944,0,93	0/1:15,0:15:99:290,0,182	0/1:45,0:44:99:1384,0,397	0/1:7,0:7:23.94:257,0,24	0/1:17,0:17:99:317,0,174	0/1:22,0:22:99:641,0,191	0/1:16,0:16:99:816,0,135	0/1:9,0:9:86.37:86,0,88	0/1:13,0:13:63.86:333,0,64	0/0:15,0:15:45.11:0,45,2147	0/0:10,0:10:30.06:0,30,1287	0/1:16,0:16:85.83:425,0,86	0/1:13,0:13:83.38:227,0,83	0/1:18,0:18:99:316,0,237	0/1:32,0:32:99:1620,0,200	0/1:8,0:8:75.88:143,0,76	0/1:8,0:8:41.87:394,0,42	0/1:20,0:20:99:468,0,162	0/1:8,0:8:53.89:366,0,54	0/1:13,0:13:70.84:388,0,71	0/0:16,0:16:48.08:0,48,1215	0/0:16,0:15:45.10:0,45,1870	0/0:8,0:8:20.19:0,20,1080
chr10	23910790	.	TAC	T	464.07	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.756;DP=1006;FS=8.565;HRun=0;HaplotypeScore=208.2883;InbreedingCoeff=0.9553;MQ=49.38;MQ0=38;MQRankSum=2.888;QD=21.09;ReadPosRankSum=1.510;VQSLOD=3.2273;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:67.03:0,67,1232	0/0:10,0:10:18.04:0,18,312	0/0:49,1:15:32.78:0,33,351	0/0:49,1:9:22.85:0,23,307	0/0:46,0:46:78.27:0,78,1325	0/0:25,0:25:36.12:0,36,624	0/0:32,0:32:60.20:0,60,1028	0/0:63,0:42:93.14:0,93,1430	0/0:34,0:34:78.20:0,78,1278	0/0:45,0:41:99:0,108,1803	0/0:19,0:19:32.82:0,33,515	0/0:39,0:39:90.26:0,90,1499	0/0:33,0:33:81.28:0,81,1376	0/0:34,0:34:69.21:0,69,1156	0/0:35,0:35:80.58:0,81,1460	0/0:34,0:34:96.33:0,96,1638	0/0:30,0:30:54.18:0,54,811	0/0:35,0:34:74.84:0,75,1143	0/0:21,0:13:11.38:0,11,506	1/1:3,19:22:42.10:559,42,0	0/0:104,0:100:99:0,141,2351	0/0:21,0:21:45.13:0,45,774	0/0:39,0:39:47.83:0,48,796	0/0:39,0:39:57.14:0,57,959	0/0:23,0:23:48.16:0,48,821	0/0:33,0:33:81.26:0,81,1340	0/0:29,0:29:69.15:0,69,1087	0/0:15,0:15:39.08:0,39,642
chr10	23910839	.	GCACACACACA	G	7089.52	PASS	AB=0.752;AC=37;AF=0.685;AN=54;BaseQRankSum=7.598;DP=669;FS=1.703;HRun=0;HaplotypeScore=221.9469;InbreedingCoeff=0.4960;MQ=45.28;MQ0=20;MQRankSum=-8.605;QD=14.74;ReadPosRankSum=-5.981;VQSLOD=1.5946;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:37:10.49:113,10,0	1/1:3,8:11:15.03:389,15,0	0/0:34,0:10:6.02:0,6,158	./.	1/1:19,6:23:20.40:480,20,0	1/1:7,9:17:23.50:478,24,0	1/1:12,11:22:19.23:494,19,0	1/1:19,1:17:9.03:181,9,0	1/1:9,8:17:14.72:336,15,0	0/1:20,0:24:24.30:206,0,24	1/1:6,1:18:12.25:160,12,0	0/1:14,10:24:2.82:512,0,3	0/1:10,11:21:63.58:576,0,64	1/1:16,13:28:32.93:755,33,0	0/0:26,0:32:56.71:0,57,2243	0/0:12,0:13:27.09:0,27,1119	0/1:12,1:20:7.98:138,0,8	0/1:13,0:16:99:169,0,104	1/1:12,0:13:3:30,3,0	1/1:10,0:16:12.62:105,13,0	1/1:42,0:55:4.24:52,4,0	1/1:10,18:29:31.80:654,32,0	1/1:7,11:18:26.89:484,27,0	1/1:18,4:22:4.76:155,5,0	1/1:5,16:21:30.10:624,30,0	0/0:31,0:31:60.17:0,60,2635	0/0:21,0:25:48.16:0,48,2098	0/0:15,0:15:24.01:0,24,800
chr10	23912671	.	CCTTT	C	4567.94	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=1.876;DP=577;FS=9.377;HRun=0;HaplotypeScore=135.6830;InbreedingCoeff=0.9931;MQ=61.21;MQ0=2;MQRankSum=-3.511;QD=37.75;ReadPosRankSum=-0.887;VQSLOD=4.7136;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:29.09:0,29,591	0/0:9,0:9:27.08:0,27,627	0/0:27,0:18:33.39:0,33,744	0/0:24,0:11:17.10:0,17,338	0/0:26,0:26:72.19:0,72,1612	0/0:20,0:20:51.11:0,51,1061	0/0:15,0:15:33.09:0,33,666	0/0:29,0:28:63.17:0,63,1241	0/0:16,0:16:45.14:0,45,1057	1/1:14,11:25:66.21:1070,66,0	1/1:13,11:24:63.10:930,63,0	0/0:16,0:16:42.11:0,42,883	0/0:37,0:36:99:0,102,2283	0/0:19,0:19:57.18:0,57,1341	0/0:23,0:23:53.47:0,53,1160	0/0:18,0:18:42.13:0,42,993	1/1:5,4:9:15.03:231,15,0	1/1:6,4:10:27.07:418,27,0	1/1:2,16:18:48.13:709,48,0	1/1:13,9:22:60.18:964,60,0	1/1:3,10:13:17.93:245,18,0	0/0:21,0:21:57.16:0,57,1264	0/0:13,0:13:33.11:0,33,838	0/0:22,0:22:56.63:0,57,1318	0/0:24,0:24:63.15:0,63,1396	0/0:24,0:24:51.18:0,51,1266	0/0:34,0:34:87.16:0,87,1980	0/0:26,0:26:78.27:0,78,1981
chr10	23912703	.	CTCTTTCTT	C	215.50	PASS	AB=0.898;AC=3;AF=0.058;AN=52;BaseQRankSum=-0.489;DP=560;FS=5.175;HRun=0;HaplotypeScore=219.6127;InbreedingCoeff=-0.0695;MQ=56.58;MQ0=5;MQRankSum=-2.665;QD=3.72;ReadPosRankSum=-0.190;VQSLOD=2.3918;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:17.96:0,18,311	0/0:12,0:12:24.03:0,24,524	./.	./.	0/0:26,0:26:31.01:0,31,634	0/0:19,0:19:24.08:0,24,675	0/0:11,0:10:9.83:0,10,94	0/0:27,0:27:5.95:0,6,42	0/0:16,0:16:24.07:0,24,490	0/0:16,0:16:14.89:0,15,116	0/0:22,0:21:23.86:0,24,300	0/0:15,0:15:27.09:0,27,682	0/0:34,0:33:36.06:0,36,863	0/0:26,0:26:48.12:0,48,1179	0/1:14,9:25:52.68:202,0,53	0/0:12,0:15:2.99:0,3,24	0/1:15,0:15:13.27:47,0,13	0/0:10,0:10:3.48:0,3,36	0/0:19,0:18:11.91:0,12,99	0/1:18,0:18:64.35:64,0,181	0/0:8,0:8:5.91:0,6,38	0/0:21,0:21:30.07:0,30,608	0/0:17,0:17:24.06:0,24,476	0/0:25,0:25:35.13:0,35,639	0/0:23,0:23:27.05:0,27,607	0/0:21,0:21:39.12:0,39,1243	0/0:38,0:38:10.51:0,11,1872	0/0:27,0:27:17.92:0,18,412
chr10	23912706	.	T	TC	670.86	PASS	AB=0.901;AC=11;AF=0.196;AN=56;BaseQRankSum=5.507;DP=551;FS=1.007;HRun=1;HaplotypeScore=144.4761;InbreedingCoeff=-0.2589;MQ=55.45;MQ0=5;MQRankSum=3.172;QD=2.90;ReadPosRankSum=0.786;VQSLOD=-0.1485;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:11.93:0,12,160	0/1:12,0:12:51.90:77,0,52	0/0:15,0:6:5.58:0,6,184	0/0:19,0:7:12.51:0,13,169	0/1:19,4:23:17.61:18,0,136	0/1:13,6:19:85.50:86,0,98	0/0:10,0:9:18.17:0,18,87	0/0:28,0:28:8.21:0,8,293	0/1:17,1:17:58.39:58,0,131	0/0:16,0:16:41.22:0,41,272	0/0:21,0:20:59.55:0,60,513	0/1:13,2:15:71.43:93,0,71	0/1:29,3:31:89.45:89,0,232	0/1:23,4:27:98.87:220,0,99	0/0:25,0:25:54.30:0,54,619	0/0:14,0:14:36.05:0,36,480	0/0:15,0:16:13.71:0,14,161	0/0:10,0:10:26.49:0,26,206	0/0:19,0:18:51.43:0,51,287	0/0:19,0:19:52.99:0,53,383	0/0:8,0:8:17.72:0,18,119	0/1:18,3:21:41.65:42,0,138	0/1:16,0:16:27.05:27,0,115	0/1:22,3:25:56.35:56,0,163	0/1:21,2:23:52.97:53,0,159	0/0:23,0:23:68.87:0,69,886	0/0:38,0:38:99:0,114,1578	0/0:24,0:24:54.81:0,55,859
chr10	23912707	.	T	TCTC	3153.06	PASS	AB=0.967;AC=22;AF=0.393;AN=56;BaseQRankSum=2.506;DP=548;FS=6.775;HRun=0;HaplotypeScore=153.1597;InbreedingCoeff=0.5856;MQ=54.50;MQ0=6;MQRankSum=6.787;QD=11.14;ReadPosRankSum=3.421;VQSLOD=2.6522;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:14,0:14:7.51:8,0,89	0/1:12,0:12:2.78:207,0,3	0/0:15,0:6:11.35:0,11,225	0/0:18,0:6:15.89:0,16,200	1/1:19,4:23:9.82:201,10,0	1/1:13,6:19:31.69:368,32,0	0/1:10,0:9:1.54:2,0,7	0/1:28,0:27:32.16:32,0,74	1/1:17,1:17:9.03:227,9,0	0/0:16,0:16:45.45:0,45,445	0/0:21,0:20:56.43:0,56,661	1/1:13,2:15:4.72:286,5,0	0/1:28,3:30:0.35:381,0,0	1/1:23,4:27:4.91:593,5,0	0/0:25,0:25:38.37:0,38,801	0/0:14,0:14:36.12:0,36,642	0/0:15,0:15:32.64:0,33,303	0/0:10,0:10:25.31:0,25,266	0/0:19,0:18:53.84:0,54,467	0/0:19,0:19:47.69:0,48,527	0/0:8,0:8:18.03:0,18,185	1/1:19,3:22:30.67:295,31,0	1/1:16,0:16:8.27:184,8,0	0/1:22,3:25:40.55:253,0,41	1/1:21,2:23:18.10:307,18,0	0/0:23,0:23:59.24:0,59,1124	0/0:38,0:38:99:0,114,2044	0/0:24,0:24:54.70:0,55,1128
chr10	23912717	.	C	CT	730.31	PASS	AB=0.811;AC=6;AF=0.107;AN=56;BaseQRankSum=5.166;DP=512;FS=0.722;HRun=3;HaplotypeScore=130.3360;InbreedingCoeff=-0.1024;MQ=53.17;MQ0=7;MQRankSum=-5.122;QD=7.94;ReadPosRankSum=-4.001;VQSLOD=-0.5401;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:33.10:0,33,390	0/0:11,0:11:29.86:0,30,291	0/1:10,0:4:7.57:8,0,59	0/0:8,0:1:2.60:0,3,10	0/0:22,0:22:56.19:0,56,565	0/0:19,0:19:47.24:0,47,433	0/0:11,0:10:24.02:0,24,259	0/0:29,0:28:69.20:0,69,815	0/0:19,0:18:50.95:0,51,549	0/1:11,6:17:99:199,0,321	0/1:11,9:20:99:304,0,271	0/0:15,0:15:38.52:0,39,366	0/0:32,0:31:86.61:0,87,898	0/0:27,0:27:80.43:0,80,759	0/0:24,0:24:44.29:0,44,417	0/0:13,0:13:26.95:0,27,303	0/1:9,3:12:65.63:66,0,162	0/0:12,0:12:19.31:0,19,235	0/1:13,1:13:5.64:6,0,352	0/1:11,8:18:99:267,0,287	0/0:6,1:7:15.03:0,15,167	0/0:19,0:19:56.89:0,57,591	0/0:14,0:14:35.97:0,36,387	0/0:28,0:28:74.95:0,75,810	0/0:20,0:20:53.63:0,54,554	0/0:23,0:23:69.21:0,69,828	0/0:34,0:34:99:0,99,1166	0/0:19,0:18:54.02:0,54,589
chr10	23912721	.	C	CT	101.57	PASS	AB=0.647;AC=1;AF=0.018;AN=56;BaseQRankSum=6.682;DP=505;FS=4.140;HRun=3;HaplotypeScore=131.1959;InbreedingCoeff=0.1548;MQ=53.39;MQ0=7;MQRankSum=-6.758;QD=9.23;ReadPosRankSum=-1.426;VQSLOD=0.6771;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:30.09:0,30,354	0/0:10,0:10:29.86:0,30,291	0/0:7,0:2:2.68:0,3,11	0/0:7,0:1:0.89:0,1,2	0/0:24,0:24:62.95:0,63,644	0/0:18,0:18:47.26:0,47,433	0/0:12,0:11:27.08:0,27,323	0/0:29,0:28:72.17:0,72,833	0/0:18,0:17:41.89:0,42,505	0/0:16,0:16:25.99:0,26,302	0/0:20,0:20:0.59:0,1,273	0/0:16,0:16:41.51:0,42,389	0/0:33,0:32:95.59:0,96,981	0/0:27,0:27:80.39:0,80,748	0/0:25,0:25:47.29:0,47,452	0/0:14,0:14:29.96:0,30,339	0/0:12,0:12:7.49:0,7,170	0/1:5,6:11:99:176,0,160	0/0:12,0:11:25.57:0,26,338	0/0:18,0:17:7.21:0,7,279	0/0:7,0:7:12.04:0,12,144	0/0:18,0:18:53.89:0,54,566	0/0:14,0:14:35.97:0,36,387	0/0:27,0:27:74.95:0,75,808	0/0:20,0:19:53.63:0,54,554	0/0:24,0:24:69.21:0,69,828	0/0:34,0:34:99:0,99,1163	0/0:19,0:18:48.58:0,49,552
chr10	23917712	.	AT	A	620.76	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.246;DP=545;FS=3.706;HRun=8;HaplotypeScore=54.1966;InbreedingCoeff=0.9744;MQ=68.80;MQ0=0;MQRankSum=0.251;QD=18.81;ReadPosRankSum=1.960;VQSLOD=3.5055;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,15:19:30.87:366,31,0	0/0:9,0:9:24.07:0,24,290	0/0:14,0:13:23.89:0,24,277	0/0:13,0:10:18.03:0,18,201	0/0:34,0:34:93.20:0,93,1104	0/0:20,0:20:48.15:0,48,580	0/0:15,0:14:29.48:0,29,361	0/0:22,0:22:54.16:0,54,641	0/0:18,0:18:54.15:0,54,640	0/0:16,0:16:42.13:0,42,507	0/0:29,0:29:78.23:0,78,932	0/0:21,0:20:60.17:0,60,713	0/0:23,0:23:66.20:0,66,790	0/0:14,0:14:42.13:0,42,507	0/0:20,0:20:51.15:0,51,606	0/0:17,0:17:45.14:0,45,544	0/0:23,1:24:62.65:0,63,743	0/0:16,0:16:48.01:0,48,557	0/0:16,0:16:33.09:0,33,389	0/0:27,0:27:72.22:0,72,869	0/0:7,0:7:21.06:0,21,254	1/1:1,13:14:39.06:377,39,0	0/0:23,0:23:60.17:0,60,713	0/0:6,0:6:12.02:0,12,131	0/0:27,0:27:78.24:0,78,942	0/0:39,0:39:99:0,108,1282	0/0:34,0:34:95.96:0,96,1124	0/0:8,0:8:24.07:0,24,290
chr10	23919073	.	C	CA	20993.20	PASS	AB=0.857;AC=55;AF=0.982;AN=56;BaseQRankSum=-0.532;DP=527;FS=0.000;HRun=1;HaplotypeScore=164.2605;InbreedingCoeff=-0.0294;MQ=53.95;MQ0=0;MQRankSum=-2.389;QD=39.84;ReadPosRankSum=1.879;VQSLOD=4.3760;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,13:15:42.06:600,42,0	1/1:0,14:14:42.14:628,42,0	1/1:5,1:6:4.55:161,5,0	0/1:5,1:6:22.51:166,0,23	1/1:1,31:32:90.30:1338,90,0	1/1:1,26:27:72.24:1071,72,0	1/1:2,6:8:18.06:263,18,0	1/1:3,34:37:99:1583,111,0	1/1:0,17:17:51.17:757,51,0	1/1:0,26:26:78.22:1106,78,0	1/1:4,18:22:57.11:781,57,0	1/1:0,13:13:36.12:538,36,0	1/1:4,20:24:66.13:929,66,0	1/1:0,26:26:75.25:1116,75,0	1/1:1,17:18:48.16:717,48,0	1/1:5,25:29:78.20:1119,78,0	1/1:0,8:8:21.04:289,21,0	1/1:0,4:4:12.04:180,12,0	1/1:1,18:19:54.18:803,54,0	1/1:3,28:31:81.20:1161,81,0	1/1:0,7:7:11.95:129,12,0	1/1:2,28:30:78.18:1130,78,0	1/1:2,17:19:48.08:687,48,0	1/1:0,12:12:33.11:491,33,0	1/1:0,24:24:72.24:1070,72,0	1/1:1,21:22:66.19:956,66,0	1/1:2,26:28:78.18:1134,78,0	1/1:0,2:2:6.02:90,6,0
chr10	23919896	.	CT	C	608.98	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.912;DP=609;FS=2.836;HRun=7;HaplotypeScore=57.9588;InbreedingCoeff=0.9965;MQ=74.65;MQ0=0;MQRankSum=-1.351;QD=22.55;ReadPosRankSum=0.419;VQSLOD=3.3807;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,25:27:69.16:704,69,0	0/0:13,0:13:36.09:0,36,427	0/0:12,0:12:30.09:0,30,358	0/0:20,0:20:34.33:0,34,398	0/0:38,0:38:99:0,102,1275	0/0:29,0:29:87.07:0,87,1070	0/0:16,0:16:48.14:0,48,590	0/0:30,0:29:81.25:0,81,1000	0/0:27,0:27:75.22:0,75,922	0/0:26,0:26:75.22:0,75,921	0/0:11,0:11:27.09:0,27,340	0/0:23,0:23:63.20:0,63,791	0/0:34,0:34:96.28:0,96,1181	0/0:26,0:26:75.23:0,75,931	0/0:28,0:28:81.25:0,81,1006	0/0:20,0:20:57.18:0,57,717	0/0:26,0:26:66.20:0,66,818	0/0:16,0:16:38.86:0,39,447	0/0:19,0:19:51.16:0,51,630	0/0:26,0:26:69.22:0,69,867	0/0:10,0:10:30.10:0,30,377	0/0:21,0:21:57.18:0,57,711	0/0:22,0:22:63.19:0,63,771	0/0:15,0:15:42.08:0,42,495	0/0:13,0:13:39.12:0,39,490	0/0:26,0:26:69.22:0,69,867	0/0:26,0:26:75.22:0,75,920	0/0:9,0:9:27.09:0,27,340
chr10	23922135	.	CATATCATATATATATAT	C	5776.02	PASS	AC=20;AF=0.370;AN=54;BaseQRankSum=4.770;DP=272;FS=6.158;HRun=0;HaplotypeScore=120.0341;InbreedingCoeff=0.7785;MQ=75.80;MQ0=7;MQRankSum=-2.286;QD=52.04;ReadPosRankSum=4.003;VQSLOD=3.6295;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:8,0:8:18.06:629,18,0	0/0:3,0:3:9.03:0,9,363	0/0:21,0:7:6.47:0,6,243	0/0:43,0:18:31.80:0,32,443	0/0:9,0:9:24.07:0,24,543	0/0:6,0:6:9.03:0,9,222	0/0:3,0:3:9.03:0,9,244	0/0:37,0:37:93.31:0,93,2677	0/0:6,0:6:15.05:0,15,537	1/1:7,0:7:18.05:234,18,0	1/1:0,7:7:12.04:586,12,0	0/0:3,0:3:9.03:0,9,184	0/0:2,0:2:3.01:0,3,107	0/0:6,0:6:6.02:0,6,153	0/0:2,0:2:6.02:0,6,256	0/0:4,0:4:9.03:0,9,255	1/1:1,11:12:12.04:422,12,0	1/1:2,0:2:3.01:41,3,0	1/1:2,15:20:54.18:1543,54,0	1/1:1,12:13:12.04:586,12,0	./.	0/0:3,0:3:9.02:0,9,240	0/0:5,0:5:15.05:0,15,277	0/0:1,0:1:3.01:0,3,107	0/0:7,0:7:18.06:0,18,431	1/1:1,0:21:41.48:1117,41,0	1/1:2,0:16:9.03:369,9,0	1/1:0,0:5:6.02:249,6,0
chr10	23922139	.	TC	T	1305.80	PASS	AB=1.000;AC=21;AF=0.389;AN=54;BaseQRankSum=6.617;DP=260;FS=3.126;HRun=1;HaplotypeScore=69.5867;InbreedingCoeff=0.7382;MQ=76.49;MQ0=9;MQRankSum=-2.867;QD=12.09;ReadPosRankSum=5.071;VQSLOD=2.4416;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,8:8:18.02:191,18,0	0/0:3,0:3:8.97:0,9,73	0/0:21,0:7:11.19:0,11,151	0/0:43,0:18:27.23:0,27,287	0/0:9,0:9:24.01:0,24,307	0/0:5,0:5:8.98:0,9,91	0/0:3,0:3:9.03:0,9,126	0/0:36,0:36:92.25:0,92,1301	0/0:6,0:6:14.85:0,15,179	1/1:2,4:6:18.05:235,18,0	1/1:7,0:7:11.19:52,11,0	0/0:3,0:3:9.03:0,9,143	0/0:1,0:1:2.97:0,3,20	0/0:3,0:3:6:0,6,69	0/0:2,0:2:6.02:0,6,77	0/1:3,0:3:2.43:2,0,87	1/1:11,1:12:8.61:65,9,0	1/1:1,1:2:3.01:41,3,0	1/1:19,0:18:48.08:492,48,0	1/1:12,0:12:11.40:66,11,0	./.	0/0:3,0:3:8.56:0,9,56	0/0:5,0:5:15.05:0,15,236	0/0:1,0:1:2.74:0,3,12	0/0:7,0:7:18.04:0,18,262	1/1:20,0:20:31.89:266,32,0	1/1:14,0:14:8.61:64,9,0	1/1:5,0:5:5.60:25,6,0
chr10	23922140	.	CATATAT	C	2578.03	PASS	AB=1.000;AC=39;AF=0.848;AN=46;BaseQRankSum=1.616;DP=257;FS=16.229;HRun=0;HaplotypeScore=82.7813;InbreedingCoeff=0.3234;MQ=76.66;MQ0=9;MQRankSum=-2.260;QD=11.99;ReadPosRankSum=3.495;VQSLOD=0.9261;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,0:8:12.04:162,12,0	1/1:0,2:3:6.91:127,7,0	0/0:21,0:7:3.01:0,3,40	0/1:43,0:18:15.13:15,0,38	1/1:5,3:8:6.02:125,6,0	1/1:2,1:6:9.03:152,9,0	1/1:2,0:3:0.89:2,1,0	1/1:22,12:35:16.50:468,17,0	1/1:4,0:6:3.90:44,4,0	./.	1/1:7,0:7:12.04:167,12,0	./.	1/1:0,1:1:3.01:63,3,0	1/1:1,2:3:3.01:63,3,0	0/0:1,0:2:3.01:0,3,39	0/0:3,0:3:3.01:0,3,51	1/1:12,0:12:8.93:102,9,0	./.	1/1:19,0:18:23.91:289,24,0	1/1:12,0:12:12.04:167,12,0	./.	1/1:0,2:2:6.02:125,6,0	./.	1/1:0,1:1:3.01:63,3,0	1/1:6,1:7:3.01:63,3,0	1/1:20,0:20:21.07:293,21,0	1/1:14,0:14:9.03:122,9,0	1/1:5,0:5:6.02:84,6,0
chr10	23922152	.	T	TC	145.29	PASS	AB=0.881;AC=6;AF=0.111;AN=54;BaseQRankSum=0.020;DP=242;FS=0.000;HRun=0;HaplotypeScore=71.9201;InbreedingCoeff=-0.1100;MQ=65.29;MQ0=10;MQRankSum=2.188;QD=2.14;ReadPosRankSum=-3.417;VQSLOD=0.5781;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:2,0:6:3.90:0,4,32	0/0:3,0:3:8.44:0,8,40	0/0:20,0:4:4.83:0,5,47	0/0:45,0:16:11.04:0,11,133	0/0:5,0:5:8.61:0,9,67	0/0:6,0:6:11.48:0,11,82	0/0:1,0:1:2.84:0,3,14	0/0:32,0:32:86.41:0,86,1007	0/0:5,0:5:11.54:0,12,109	0/1:3,2:5:79.90:80,0,82	0/1:7,0:7:4.40:28,0,4	0/0:1,0:1:3.01:0,3,41	0/0:1,0:1:2.80:0,3,13	0/0:2,0:2:2.80:0,3,13	0/0:2,0:2:5.93:0,6,58	0/0:2,0:2:6:0,6,51	0/1:13,0:12:38.12:38,0,40	0/1:1,3:4:7.43:42,0,7	0/1:19,0:18:65.68:66,0,144	0/0:12,0:12:6.22:0,6,17	./.	0/0:2,0:2:5.60:0,6,25	0/0:1,0:1:3.01:0,3,41	0/0:1,0:1:2.80:0,3,13	0/0:7,0:7:14.84:0,15,178	0/1:20,0:20:4.27:4,0,59	0/0:14,0:14:7.12:0,7,25	0/0:5,0:5:4.44:0,4,14
chr10	23922760	.	T	TA	416.51	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=1.989;DP=726;FS=2.478;HRun=1;HaplotypeScore=88.4597;InbreedingCoeff=0.9973;MQ=79.44;MQ0=0;MQRankSum=-4.037;QD=23.14;ReadPosRankSum=-0.757;VQSLOD=3.4951;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,14:17:36.10:511,36,0	0/0:8,0:8:24.06:0,24,297	0/0:15,0:15:39.58:0,40,478	0/0:22,0:22:54.62:0,55,669	0/0:25,0:25:75.24:0,75,971	0/0:39,0:38:99:0,117,1519	0/0:15,0:15:42.14:0,42,545	0/0:38,0:37:99:0,108,1389	0/0:16,0:16:48.15:0,48,614	0/0:32,0:32:87.28:0,87,1132	0/0:23,0:23:54.16:0,54,685	0/0:22,0:22:66.21:0,66,857	0/0:33,0:33:90.27:0,90,1151	0/0:33,0:33:93.28:0,93,1189	0/0:40,0:40:99:0,117,1504	0/0:36,0:36:99:0,108,1401	0/0:16,0:16:42.14:0,42,545	0/0:11,0:11:33.08:0,33,410	0/0:29,0:29:84.26:0,84,1077	0/0:32,0:32:75.24:0,75,973	0/0:29,0:29:75.24:0,75,973	0/0:27,0:27:81.26:0,81,1051	0/0:34,0:34:99:0,99,1284	0/0:18,0:18:51.17:0,51,662	0/0:29,0:29:87.25:0,87,1099	0/0:36,0:36:99:0,102,1292	0/0:38,0:38:75.22:0,75,946	0/0:12,0:12:36.10:0,36,448
chr10	23922794	.	A	AT	186.69	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.247;DP=685;FS=2.392;HRun=1;HaplotypeScore=96.8866;InbreedingCoeff=0.9662;MQ=60.59;MQ0=5;MQRankSum=-3.545;QD=10.37;ReadPosRankSum=0.394;VQSLOD=1.5954;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,4:18:29.92:281,30,0	0/0:10,0:10:30.08:0,30,375	0/0:27,0:15:42.06:0,42,488	0/0:26,0:17:36.18:0,36,378	0/0:26,0:26:72.21:0,72,906	0/0:40,0:40:99:0,115,1462	0/0:22,0:22:54.17:0,54,698	0/0:28,0:28:75.71:0,76,959	0/0:19,0:19:54.16:0,54,680	0/0:25,0:25:57:0,57,696	0/0:15,0:15:15.94:0,16,198	0/0:25,0:25:75.24:0,75,961	0/0:36,0:34:96.29:0,96,1228	0/0:32,0:32:90.23:0,90,1109	0/0:31,0:31:87.28:0,87,1127	0/0:31,0:31:87.25:0,87,1089	0/0:11,0:11:14.93:0,15,138	0/0:7,0:7:21.07:0,21,269	0/0:24,0:24:70.93:0,71,850	0/0:24,0:24:41.33:0,41,415	0/0:27,0:27:42:0,42,515	0/0:24,0:24:69.22:0,69,889	0/0:31,0:31:87.24:0,87,1083	0/0:17,0:17:45.15:0,45,580	0/0:27,0:27:75.24:0,75,970	0/0:37,0:37:99:0,101,1202	0/0:35,0:35:59.83:0,60,596	0/0:10,0:10:30.04:0,30,355
chr10	23922795	.	TA	T	179.27	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.401;DP=685;FS=1.249;HRun=1;HaplotypeScore=93.8745;InbreedingCoeff=0.9773;MQ=59.73;MQ0=5;MQRankSum=-2.985;QD=11.95;ReadPosRankSum=2.383;VQSLOD=2.2924;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,8:15:26.28:273,26,0	0/0:10,0:10:30.09:0,30,457	0/0:27,0:15:45.14:0,45,653	0/0:24,0:15:36.89:0,37,460	0/0:27,0:27:78.24:0,78,1181	0/0:41,0:41:99:0,118,1814	0/0:22,0:22:57.19:0,57,878	0/0:28,0:28:81.74:0,82,1244	0/0:20,0:20:60.17:0,60,868	0/0:25,0:25:57.09:0,57,823	0/0:15,0:15:28.12:0,28,294	0/0:27,0:27:78.24:0,78,1199	0/0:37,0:35:99:0,105,1600	0/0:33,0:33:93.29:0,93,1420	0/0:30,0:30:87.29:0,87,1369	0/0:29,0:29:87.28:0,87,1336	0/0:11,0:11:15.01:0,15,173	0/0:7,0:7:21.07:0,21,322	0/0:24,0:24:72.21:0,72,1059	0/0:24,0:24:42.04:0,42,538	0/0:27,0:27:45.01:0,45,639	0/0:25,0:25:69.22:0,69,1061	0/0:31,0:31:90.25:0,90,1335	0/0:17,0:17:45.14:0,45,693	0/0:26,0:26:75.24:0,75,1160	0/0:38,0:38:99:0,105,1500	0/0:35,0:35:60.61:0,61,757	0/0:10,0:10:30.09:0,30,437
chr10	23922796	.	A	ATGTGTG	5824.12	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=1.417;DP=729;FS=3.516;HRun=0;HaplotypeScore=173.9601;InbreedingCoeff=0.8143;MQ=58.49;MQ0=5;MQRankSum=-9.316;QD=20.22;ReadPosRankSum=-2.522;VQSLOD=4.2790;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:14.95:0,15,209	0/0:9,0:9:24.08:0,24,495	0/1:27,0:15:9.97:10,0,31	0/0:25,0:15:1.80:0,2,24	0/0:25,0:27:43:0,43,778	0/0:39,0:41:66.20:0,66,1255	0/0:21,0:22:27.08:0,27,499	0/0:29,0:28:1.72:0,2,178	0/0:18,0:20:48.13:0,48,860	1/1:18,0:38:58.63:1216,59,0	1/1:7,1:21:21.07:569,21,0	0/0:26,0:27:46.01:0,46,834	0/0:35,0:35:75.20:0,75,1398	0/0:33,0:33:54.15:0,54,970	0/0:28,0:30:48.11:0,48,855	0/0:27,0:28:55.06:0,55,1052	1/1:6,1:11:9.03:208,9,0	1/1:9,0:9:3.48:87,3,0	1/1:20,0:28:32.27:584,32,0	1/1:15,0:32:17.99:486,18,0	1/1:28,0:28:6.31:50,6,0	0/0:24,0:26:45.15:0,45,887	0/0:26,0:28:36.10:0,36,684	0/0:15,0:17:27.09:0,27,537	0/0:23,0:25:42.13:0,42,789	1/1:22,20:42:54.06:1210,54,0	1/1:14,22:39:36.10:1111,36,0	1/1:11,1:13:12.04:293,12,0
chr10	23923679	.	C	CT	245.74	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-5.097;DP=402;FS=0.000;HRun=6;HaplotypeScore=38.7019;InbreedingCoeff=0.8487;MQ=77.21;MQ0=0;MQRankSum=-1.139;QD=18.90;ReadPosRankSum=1.081;VQSLOD=2.5878;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,11:13:27.09:340,27,0	0/0:4,0:4:12.03:0,12,122	0/0:6,0:6:14.95:0,15,132	0/0:12,0:12:31.84:0,32,293	0/0:36,0:36:99:0,99,1010	0/0:19,0:19:54.11:0,54,544	0/0:6,0:6:15.02:0,15,146	0/0:23,0:23:63.12:0,63,632	0/0:15,0:15:42.07:0,42,420	0/0:27,0:27:69.15:0,69,704	0/0:24,0:24:69.15:0,69,698	0/0:11,0:11:30.07:0,30,306	0/0:17,0:17:42.09:0,42,428	0/0:11,0:11:33.08:0,33,337	0/0:6,0:6:15.03:0,15,153	0/0:16,0:16:45.09:0,45,455	0/0:12,0:12:30:0,30,293	0/0:9,0:9:27.06:0,27,275	0/0:17,0:17:48.11:0,48,489	0/0:21,0:21:57.13:0,57,581	0/0:9,0:9:21.05:0,21,214	0/0:5,0:5:15.03:0,15,149	0/0:20,0:20:54.10:0,54,544	0/0:5,0:5:9.02:0,9,92	0/0:19,0:19:57.13:0,57,581	0/0:21,0:21:60.12:0,60,602	0/0:13,0:13:36.07:0,36,361	0/0:5,0:5:15.03:0,15,153
chr10	23923939	.	A	AT	781.90	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-0.415;DP=606;FS=0.801;HRun=4;HaplotypeScore=64.9844;InbreedingCoeff=0.9803;MQ=78.73;MQ0=0;MQRankSum=-0.246;QD=31.28;ReadPosRankSum=-0.328;VQSLOD=3.7230;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,25:25:66.18:877,66,0	0/0:9,0:9:24.07:0,24,272	0/0:14,0:14:42.11:0,42,467	0/0:27,0:27:55.25:0,55,727	0/0:23,0:23:63.11:0,63,697	0/0:30,0:30:78.12:0,78,847	0/0:25,0:25:69.20:0,69,782	0/0:34,0:34:90.25:0,90,1021	0/0:24,0:24:71.95:0,72,752	0/0:28,0:28:84.22:0,84,937	0/0:30,0:30:81.09:0,81,878	0/0:16,0:16:39.11:0,39,442	0/0:26,0:26:78.09:0,78,850	0/0:24,0:24:60:0,60,660	0/0:31,0:31:93.25:0,93,1044	0/0:15,0:15:42.07:0,42,461	0/0:20,0:20:54.15:0,54,612	0/0:8,0:8:24.07:0,24,272	0/0:17,0:17:51.09:0,51,548	0/0:20,0:20:57.12:0,57,631	0/0:19,0:19:42.12:0,42,476	0/0:14,0:14:36.02:0,36,391	0/0:20,0:20:51.13:0,51,568	0/0:28,0:27:72.19:0,72,806	0/0:23,0:23:60.17:0,60,680	0/0:28,0:28:72.20:0,72,817	0/0:23,0:23:62.98:0,63,666	0/0:5,0:5:15.04:0,15,170
chr10	23925656	.	C	CAG	1022.87	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.533;DP=623;FS=0.837;HRun=0;HaplotypeScore=75.3684;InbreedingCoeff=0.9827;MQ=87.78;MQ0=0;MQRankSum=-0.909;QD=46.49;ReadPosRankSum=1.214;VQSLOD=4.7928;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,22:22:63.22:1118,63,0	0/0:6,0:6:15.05:0,15,206	0/0:24,0:24:54.18:0,54,740	0/0:23,0:23:57.13:0,57,735	0/0:30,0:30:72.22:0,72,971	0/0:21,0:21:60.20:0,60,824	0/0:18,0:18:51.17:0,51,698	0/0:22,0:22:57.18:0,57,767	0/0:29,0:29:78.26:0,78,1072	0/0:22,0:22:54.17:0,54,730	0/0:24,0:24:57.16:0,57,750	0/0:15,0:15:45.15:0,45,618	0/0:27,0:27:81.27:0,81,1113	0/0:16,0:16:45.10:0,45,565	0/0:21,0:21:63.21:0,63,865	0/0:24,0:24:69.23:0,69,947	0/0:18,0:18:54.15:0,54,722	0/0:15,0:15:33.11:0,33,450	0/0:16,0:16:45.15:0,45,617	0/0:33,0:33:87.29:0,87,1194	0/0:30,0:30:84.28:0,84,1154	0/0:32,0:32:81.25:0,81,1094	0/0:18,0:18:51.17:0,51,700	0/0:10,0:10:30.10:0,30,408	0/0:36,0:36:99:0,102,1400	0/0:27,0:27:72.24:0,72,990	0/0:33,0:33:96.29:0,96,1285	0/0:11,0:11:27.09:0,27,371
chr10	23927258	.	GTATAAA	G	554.50	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=5.369;DP=571;FS=1.198;HRun=0;HaplotypeScore=114.7850;InbreedingCoeff=0.7524;MQ=69.12;MQ0=0;MQRankSum=-4.277;QD=29.18;ReadPosRankSum=0.850;VQSLOD=3.2697;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,11:11:27.09:648,27,0	0/0:14,0:14:42.14:0,42,1540	0/1:8,0:8:1.29:1,0,252	0/0:7,0:6:14.99:0,15,295	0/0:25,0:25:75.26:0,75,2822	0/0:29,0:29:87.30:0,87,3154	0/0:21,0:21:63.22:0,63,2315	0/0:39,0:39:99:0,117,4193	0/0:24,0:24:72.23:0,72,2562	0/0:27,0:27:78.27:0,78,2875	0/0:30,0:30:90.31:0,90,3279	0/0:11,0:11:33.11:0,33,1219	0/0:31,0:31:87.30:0,87,3194	0/0:18,0:18:54.19:0,54,2017	0/0:24,0:24:72.23:0,72,2452	0/0:16,0:16:48.14:0,48,1531	0/0:27,0:27:81.26:0,81,2760	0/0:15,0:15:45.15:0,45,1693	0/0:20,0:20:60.20:0,60,1990	0/0:35,0:35:99:0,105,3864	0/0:13,0:13:39.13:0,39,1300	0/0:18,0:18:51.18:0,51,1820	0/0:21,0:21:63.22:0,63,2304	0/0:9,0:9:27.09:0,27,971	0/0:17,0:17:51.18:0,51,1859	0/0:21,0:21:63.22:0,63,2227	0/0:33,0:33:99:0,99,3662	0/0:7,0:7:21.07:0,21,787
chr10	23927495	.	A	AC	816.03	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-1.814;DP=581;FS=0.872;HRun=1;HaplotypeScore=53.4366;InbreedingCoeff=0.9430;MQ=90.33;MQ0=0;MQRankSum=-3.669;QD=40.80;ReadPosRankSum=0.970;VQSLOD=4.0864;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,20:20:57.19:911,57,0	0/0:14,0:14:42.14:0,42,585	0/0:20,0:20:54.14:0,54,726	0/0:26,0:26:74.69:0,75,968	0/0:17,0:17:51.17:0,51,711	0/0:25,0:25:75.25:0,75,1045	0/0:18,0:18:54.18:0,54,754	0/0:40,0:40:99:0,120,1663	0/0:11,0:11:33.11:0,33,459	0/0:34,0:34:99:0,102,1427	0/0:26,0:26:78.25:0,78,1075	0/0:14,0:14:42.14:0,42,586	0/0:19,0:19:57.19:0,57,797	0/0:22,0:22:63.21:0,63,875	0/0:21,0:21:63.21:0,63,879	0/0:22,0:22:66.22:0,66,921	0/0:12,0:12:36.12:0,36,503	0/0:8,0:8:24.08:0,24,333	0/0:21,0:21:63.21:0,63,877	0/0:21,0:21:63.21:0,63,876	0/0:22,0:22:66.22:0,66,923	0/0:21,0:21:57.19:0,57,795	0/0:22,0:22:63.17:0,63,859	0/0:13,0:13:39.12:0,39,526	0/0:31,0:31:93.29:0,93,1282	0/0:31,0:31:93.30:0,93,1282	0/0:27,0:26:81.27:0,81,1130	0/0:3,0:3:9.03:0,9,126
chr10	23928680	.	GA	G	313.67	PASS	AC=2;AF=0.037;AN=54;BaseQRankSum=5.050;DP=345;FS=0.000;HRun=5;HaplotypeScore=33.1199;InbreedingCoeff=0.8404;MQ=82.35;MQ0=0;MQRankSum=-2.323;QD=26.14;ReadPosRankSum=2.008;VQSLOD=2.1911;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,12:12:36.10:408,36,0	0/0:1,0:1:2.98:0,3,21	0/0:13,0:12:29.96:0,30,380	0/0:12,0:12:31.12:0,31,423	0/0:17,0:17:51.17:0,51,689	0/0:12,0:12:36.12:0,36,492	0/0:14,0:14:36.12:0,36,492	0/0:36,0:36:90.26:0,90,1183	0/0:12,0:12:33.11:0,33,451	0/0:10,0:10:30.10:0,30,410	0/0:17,0:17:51.16:0,51,682	0/0:10,0:10:27.09:0,27,369	0/0:17,0:17:51.15:0,51,668	0/0:11,0:11:33.11:0,33,451	0/0:12,0:12:36.11:0,36,478	0/0:11,0:11:30.04:0,30,373	0/0:12,0:12:33.07:0,33,430	0/0:15,0:15:42.04:0,42,514	0/0:11,0:11:30.10:0,30,410	0/0:10,0:10:30.10:0,30,409	0/0:7,0:7:21.07:0,21,287	0/0:8,0:8:24.08:0,24,328	0/0:11,0:11:30.10:0,30,410	0/0:9,0:9:24.07:0,24,314	0/0:13,0:13:39.10:0,39,513	0/0:18,0:18:51.14:0,51,678	0/0:12,0:12:27.09:0,27,369	./.
chr10	23928764	.	A	ATAT	2529.65	PASS	AB=0.963;AC=19;AF=0.339;AN=56;BaseQRankSum=6.362;DP=272;FS=0.581;HRun=0;HaplotypeScore=48.2972;InbreedingCoeff=0.6727;MQ=71.94;MQ0=0;MQRankSum=-3.364;QD=22.39;ReadPosRankSum=1.661;VQSLOD=2.8674;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:4:4.57:0,5,28	0/0:4,0:4:12.04:0,12,174	0/0:7,0:5:3.01:0,3,44	0/1:8,0:8:13.14:13,0,64	0/0:7,0:7:12:0,12,151	0/0:12,0:12:33.11:0,33,480	0/0:9,0:9:12.01:0,12,134	0/0:44,0:44:93.30:0,93,1328	0/0:8,0:8:21.06:0,21,287	1/1:10,0:10:15.04:218,15,0	1/1:5,1:6:9.02:116,9,0	0/0:6,0:6:9.03:0,9,132	0/0:10,0:10:12.04:0,12,175	0/0:6,0:6:6.01:0,6,69	0/0:9,0:9:12.04:0,12,173	0/0:5,0:5:12.03:0,12,156	1/1:15,2:17:32.26:393,32,0	0/1:7,1:8:5.06:245,0,5	1/1:11,0:11:27.09:452,27,0	1/1:3,8:11:15.05:217,15,0	1/1:2,1:3:9.02:112,9,0	0/0:6,0:6:6.02:0,6,88	0/0:10,0:10:15.02:0,15,179	0/0:2,0:2:6:0,6,68	0/0:9,0:9:15.05:0,15,219	0/1:13,0:13:1.11:287,0,1	1/1:10,0:10:20.93:228,21,0	1/1:14,1:15:38.52:444,39,0
chr10	23928792	.	T	TA	277.12	PASS	AB=0.952;AC=15;AF=0.268;AN=56;BaseQRankSum=7.103;DP=237;FS=0.688;HRun=0;HaplotypeScore=44.4436;InbreedingCoeff=0.4906;MQ=65.13;MQ0=4;MQRankSum=-4.497;QD=3.60;ReadPosRankSum=-0.143;VQSLOD=2.9179;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:4:5.45:0,5,24	0/0:3,0:3:9.03:0,9,126	0/0:13,0:5:13.50:0,14,106	0/0:31,0:12:18.57:0,19,212	0/0:6,0:6:18.06:0,18,249	0/0:10,0:10:30.06:0,30,367	0/0:5,0:5:8.57:0,9,160	0/0:49,0:48:99:0,144,1884	0/0:6,0:6:18.05:0,18,236	1/1:4,0:4:8.06:35,8,0	0/1:4,0:4:1.85:2,0,2	0/0:4,0:4:9.02:0,9,109	0/0:6,0:6:18.04:0,18,220	0/0:4,0:4:12.02:0,12,148	0/0:4,0:4:12.03:0,12,153	0/0:3,0:3:9.02:0,9,111	1/1:17,1:18:8.65:105,9,0	1/1:7,0:7:4.10:56,4,0	1/1:13,0:12:19.11:104,19,0	1/1:2,0:2:2.92:17,3,0	0/0:0,1:1:1.55:0,2,4	0/0:2,0:2:6.02:0,6,84	0/0:1,0:1:3.01:0,3,42	0/0:1,0:1:3:0,3,27	0/0:6,0:6:15.05:0,15,209	1/1:7,0:7:0.65:64,1,0	0/1:4,0:4:12.51:13,0,17	0/1:15,3:17:38.63:39,0,85
chr10	23928797	.	TTTA	T	832.70	PASS	AB=1.000;AC=20;AF=0.357;AN=56;BaseQRankSum=7.809;DP=230;FS=4.168;HRun=0;HaplotypeScore=48.9623;InbreedingCoeff=0.6012;MQ=62.99;MQ0=4;MQRankSum=-5.496;QD=8.16;ReadPosRankSum=0.494;VQSLOD=2.2580;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:3:6.34:35,6,0	0/0:3,0:3:9.03:0,9,179	0/1:13,0:5:3.73:4,0,88	0/1:30,0:11:22.93:23,0,162	0/0:8,0:8:24.05:0,24,410	0/0:8,0:8:24.06:0,24,404	0/1:5,0:5:9.64:10,0,211	0/0:44,0:43:99:0,129,1822	0/0:6,0:6:18.03:0,18,247	1/1:3,1:4:11.84:109,12,0	1/1:4,0:4:11.29:88,11,0	0/0:3,0:3:9.03:0,9,115	0/0:5,0:5:15.05:0,15,287	0/0:4,0:4:12.04:0,12,221	0/0:3,0:3:9.03:0,9,174	0/0:3,0:3:9.02:0,9,115	1/1:13,6:19:35.06:401,35,0	1/1:8,1:9:16.37:125,16,0	1/1:9,1:9:22.24:195,22,0	1/1:2,0:2:2.88:15,3,0	1/1:1,0:1:2.60:10,3,0	0/0:2,0:2:6.02:0,6,99	0/0:1,0:1:3.01:0,3,61	0/1:1,0:1:0:0,0,0	0/0:6,0:6:18.06:0,18,298	0/0:8,0:8:23.22:0,23,236	0/0:6,0:6:17.69:0,18,143	0/0:18,0:17:46.14:0,46,475
chr10	23929120	.	GA	G	677.82	PASS	AB=0.875;AC=3;AF=0.054;AN=56;BaseQRankSum=6.613;DP=526;FS=17.579;HRun=9;HaplotypeScore=51.0225;InbreedingCoeff=0.5653;MQ=72.41;MQ0=0;MQRankSum=0.165;QD=16.95;ReadPosRankSum=0.443;VQSLOD=2.2375;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,32:33:84.05:769,84,0	0/0:5,0:5:15.04:0,15,173	0/0:9,0:9:18.05:0,18,205	0/0:10,0:10:23.73:0,24,242	0/0:25,0:25:72.20:0,72,822	0/0:24,1:26:44.57:0,45,740	0/0:14,0:14:36.11:0,36,415	0/0:28,0:28:72.21:0,72,829	0/0:19,0:19:54.15:0,54,611	0/0:27,0:27:69.21:0,69,796	0/0:28,0:28:72.21:0,72,831	0/0:18,2:20:2.22:0,2,523	0/0:17,0:17:39.12:0,39,450	0/0:21,0:21:63.19:0,63,727	0/0:26,0:26:72.20:0,72,822	0/0:29,0:29:75.22:0,75,866	0/0:15,0:15:39.12:0,39,450	0/0:12,0:12:30.05:0,30,329	0/0:19,0:19:45.12:0,45,510	0/0:14,0:14:39.12:0,39,450	0/0:7,0:7:21.06:0,21,242	0/0:23,0:24:72.05:0,72,811	0/0:16,0:17:44.95:0,45,489	0/0:11,0:11:33.10:0,33,381	0/0:13,0:13:39.11:0,39,443	0/0:28,0:28:78.22:0,78,893	0/0:22,0:21:63.19:0,63,727	0/1:6,1:7:12.42:12,0,123
chr10	23929404	.	A	AT	424.44	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-2.265;DP=545;FS=2.120;HRun=8;HaplotypeScore=54.9981;InbreedingCoeff=0.8867;MQ=75.13;MQ0=0;MQRankSum=-1.789;QD=24.97;ReadPosRankSum=0.286;VQSLOD=4.3211;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,16:17:45.13:519,45,0	0/0:8,0:8:24.01:0,24,220	0/0:12,0:12:20.83:0,21,165	0/0:15,0:14:6.39:0,6,127	0/0:31,0:31:90.03:0,90,819	0/0:26,0:26:66.03:0,66,604	0/0:10,0:10:26.99:0,27,242	0/0:38,0:38:75.02:0,75,686	0/0:19,0:19:51.02:0,51,466	0/0:26,0:26:66.02:0,66,601	0/0:24,0:24:66.03:0,66,604	0/0:15,0:15:42.02:0,42,384	0/0:23,0:23:62.98:0,63,562	0/0:16,0:17:44.05:0,44,390	0/0:18,0:18:54.02:0,54,490	0/0:12,0:12:30.01:0,30,275	0/0:12,0:12:27.01:0,27,247	0/0:7,0:7:15:0,15,137	0/0:22,0:23:58.93:0,59,512	0/0:25,0:25:60:0,60,540	0/0:11,0:11:30.02:0,30,275	0/0:17,0:17:48.03:0,48,439	0/0:33,0:33:90.01:0,90,817	0/0:12,0:12:36.02:0,36,329	0/0:19,0:19:51:0,51,457	0/0:27,0:27:72.03:0,72,656	0/0:38,0:40:99:0,109,964	0/0:8,0:8:21:0,21,192
chr10	23929963	.	T	TA	1307.22	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=1.884;DP=398;FS=0.000;HRun=9;HaplotypeScore=39.9419;InbreedingCoeff=0.8682;MQ=69.62;MQ0=0;MQRankSum=1.219;QD=22.16;ReadPosRankSum=0.437;VQSLOD=3.8573;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:0,0:16:30.56:0,31,90	0/0:3,0:3:9:0,9,78	0/0:8,0:8:17.96:0,18,150	0/0:2,0:2:3:0,3,26	0/0:25,0:24:71.98:0,72,625	0/0:12,0:12:32.97:0,33,282	0/0:7,0:7:15:0,15,130	0/0:22,0:22:44.97:0,45,391	0/0:10,0:10:29.99:0,30,260	0/0:35,0:35:95.97:0,96,833	0/0:30,0:30:80.96:0,81,700	0/0:9,0:9:26.99:0,27,234	0/0:12,0:12:35.99:0,36,313	0/0:17,0:17:47.99:0,48,417	0/0:10,0:10:23.98:0,24,208	0/0:7,0:7:21:0,21,182	0/0:10,0:10:29.95:0,30,253	0/0:16,0:16:44.98:0,45,391	0/0:22,0:22:56.97:0,57,495	0/0:18,0:18:44.97:0,45,391	0/0:4,0:4:12:0,12,104	0/0:4,0:4:5.99:0,6,52	0/0:15,0:15:35.99:0,36,313	0/0:6,0:6:18:0,18,156	0/0:19,0:19:44.98:0,45,391	1/1:4,16:20:42.08:446,42,0	1/1:5,21:26:37.11:638,37,0	1/1:1,12:13:33.09:365,33,0
chr10	23930231	.	C	CT	1796.51	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=10.742;DP=641;FS=3.575;HRun=1;HaplotypeScore=85.9513;InbreedingCoeff=0.9938;MQ=69.32;MQ0=0;MQRankSum=-1.826;QD=35.23;ReadPosRankSum=2.356;VQSLOD=3.8560;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,50:50:99:1891,133,0	0/0:14,0:14:42.14:0,42,586	0/0:27,0:25:51.97:0,52,841	0/0:27,0:27:75.23:0,75,1030	0/0:30,0:30:84.26:0,84,1156	0/0:17,0:17:51.15:0,51,692	0/0:19,0:19:54.13:0,54,700	0/0:29,0:29:84.27:0,84,1159	0/0:23,0:23:69.23:0,69,965	0/0:29,0:29:87.28:0,87,1127	0/0:28,0:28:81.22:0,81,1031	0/0:27,0:27:78.23:0,78,1057	0/0:22,0:22:66.22:0,66,923	0/0:21,0:21:63.21:0,63,881	0/0:34,0:34:99:0,102,1425	0/0:14,0:14:42.14:0,42,588	0/0:25,0:25:72.23:0,72,935	0/0:7,0:7:21.07:0,21,273	0/0:18,0:18:45.15:0,45,584	0/0:24,0:24:72.23:0,72,933	0/0:25,0:25:72.23:0,72,934	0/0:16,0:16:48.16:0,48,671	0/0:13,0:13:36.12:0,36,503	0/0:18,0:18:51.17:0,51,713	0/0:22,0:22:66.22:0,66,923	0/0:28,0:28:81.26:0,81,1052	0/0:25,0:25:72.23:0,72,931	0/0:8,0:8:24.08:0,24,311
chr10	23931526	.	C	CA	5743.32	PASS	AB=0.568;AC=13;AF=0.232;AN=56;BaseQRankSum=-13.542;DP=587;FS=2.074;HRun=3;HaplotypeScore=58.2757;InbreedingCoeff=0.9009;MQ=58.64;MQ0=12;MQRankSum=0.455;QD=34.19;ReadPosRankSum=0.856;VQSLOD=5.3427;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:45.11:0,45,525	0/0:12,0:12:36.11:0,36,431	0/0:22,0:10:27.07:0,27,316	0/0:20,0:10:27.04:0,27,273	0/0:23,0:23:66.20:0,66,791	0/0:16,0:16:45.14:0,45,540	0/0:9,0:9:24.07:0,24,288	0/0:34,0:32:87.25:0,87,1024	0/0:25,0:25:69.20:0,69,816	1/1:1,23:24:69.21:928,69,0	1/1:1,24:25:72.11:942,72,0	0/0:14,0:14:42.12:0,42,492	0/0:28,0:28:81.24:0,81,960	0/0:17,0:17:51.16:0,51,611	0/0:25,0:25:72.22:0,72,864	0/0:21,0:21:60.18:0,60,720	0/1:6,19:24:16.95:618,0,17	1/1:1,21:22:60.20:840,60,0	1/1:2,17:19:45.64:630,46,0	1/1:6,25:30:72.21:987,72,0	1/1:0,22:22:57.19:798,57,0	0/0:16,0:16:48.15:0,48,575	0/0:15,0:15:36.09:0,36,417	0/0:19,0:18:42.11:0,42,490	0/0:17,0:17:42.13:0,42,504	0/0:27,0:27:72.21:0,72,853	0/0:30,0:29:81.25:0,81,972	0/0:9,0:9:27.08:0,27,324
chr10	23932893	.	AG	A	4692.71	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=14.866;DP=546;FS=0.802;HRun=1;HaplotypeScore=78.7272;InbreedingCoeff=0.9946;MQ=62.94;MQ0=5;MQRankSum=-0.080;QD=37.84;ReadPosRankSum=1.835;VQSLOD=5.4006;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:60.20:0,60,958	0/0:8,0:8:18.06:0,18,288	0/0:19,0:15:45.15:0,45,718	0/0:19,0:15:42.14:0,42,669	0/0:46,0:46:99:0,129,2050	0/0:22,0:22:66.22:0,66,1034	0/0:8,0:8:21.07:0,21,326	0/0:26,0:26:78.26:0,78,1215	0/0:19,0:19:57.19:0,57,911	1/1:1,22:23:69.23:948,69,0	1/1:1,22:23:63.21:875,63,0	0/0:6,0:6:18.06:0,18,288	0/0:13,0:13:39.13:0,39,621	0/0:9,0:9:24.08:0,24,382	0/0:17,0:16:48.16:0,48,767	0/0:19,0:19:57.19:0,57,911	1/1:1,19:20:57.19:793,57,0	1/1:0,10:10:24.08:336,24,0	1/1:1,12:9:27.09:374,27,0	1/1:1,25:26:78.25:1072,78,0	1/1:0,9:9:21.07:294,21,0	0/0:20,0:20:60.20:0,60,959	0/0:31,0:31:87.30:0,87,1390	0/0:10,0:10:30.10:0,30,479	0/0:21,0:21:60.18:0,60,933	0/0:25,0:25:72.24:0,72,1127	0/0:38,0:38:99:0,108,1661	0/0:21,0:21:60.20:0,60,959
chr10	23932959	.	TAA	T	3611.11	PASS	AB=0.506;AC=17;AF=0.304;AN=56;BaseQRankSum=6.494;DP=502;FS=23.610;HRun=11;HaplotypeScore=81.0630;InbreedingCoeff=0.8965;MQ=60.37;MQ0=4;MQRankSum=0.083;QD=18.61;ReadPosRankSum=3.031;VQSLOD=0.8518;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,17:23:42.06:446,42,0	0/0:6,0:6:15.05:0,15,230	0/0:14,0:10:15.03:0,15,203	0/0:10,0:9:7.27:0,7,91	0/0:24,0:24:60.20:0,60,912	0/0:22,0:22:54.18:0,54,823	0/0:9,0:9:24.08:0,24,369	0/0:31,0:31:72.23:0,72,1084	0/0:17,0:17:48.13:0,48,677	1/1:4,20:24:66.14:690,66,0	1/1:2,24:26:46.09:553,46,0	0/0:8,0:8:24.06:0,24,329	0/0:14,0:14:36.11:0,36,534	0/0:16,0:16:39.12:0,39,580	0/0:14,0:14:39.12:0,39,581	0/0:14,0:14:39.12:0,39,562	1/1:5,20:26:59.84:608,60,0	1/1:2,7:9:21.05:224,21,0	1/1:6,8:13:27.05:280,27,0	1/1:3,21:23:57.11:606,57,0	1/1:0,6:6:18.05:191,18,0	0/0:16,0:16:27.05:0,27,389	0/0:17,0:17:45.01:0,45,572	0/0:6,0:6:15.05:0,15,231	0/0:18,0:18:45.08:0,45,642	0/0:3,1:26:29.16:0,29,187	0/1:1,3:41:12.47:12,0,173	0/0:8,0:25:57.39:0,57,266
chr10	23939016	.	CA	C	1197.68	PASS	AB=0.867;AC=23;AF=0.426;AN=54;BaseQRankSum=5.224;DP=484;FS=3.299;HRun=14;HaplotypeScore=61.8304;InbreedingCoeff=0.5961;MQ=50.45;MQ0=17;MQRankSum=0.778;QD=5.05;ReadPosRankSum=3.080;VQSLOD=2.0560;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:29:28.82:0,29,182	0/0:9,0:9:20.52:0,21,176	0/0:15,0:5:11.88:0,12,99	./.	0/0:23,2:29:19.36:0,19,404	0/1:16,3:19:14.13:14,0,168	0/1:12,1:14:8.77:9,0,181	0/0:24,2:23:24.61:0,25,343	0/0:16,0:15:29.91:0,30,251	1/1:12,14:25:10.71:215,11,0	1/1:6,14:22:42.63:278,43,0	0/0:16,0:17:36.87:0,37,280	0/1:12,1:14:12.97:13,0,76	0/0:16,0:15:23.95:0,24,206	0/1:17,2:20:5.32:5,0,222	0/0:10,0:13:4.39:0,4,159	1/1:7,15:22:42.70:279,43,0	1/1:5,4:11:16.61:100,17,0	1/1:9,5:11:17.82:123,18,0	0/1:9,7:16:36.64:66,0,37	1/1:3,2:5:10.96:67,11,0	0/0:12,0:13:23.86:0,24,209	0/0:23,0:23:39.31:0,39,333	0/0:12,1:13:9.40:0,9,220	0/0:19,1:20:24.33:0,24,344	1/1:4,1:20:35.56:116,36,0	1/1:5,0:21:28.51:83,29,0	1/1:1,0:6:10.19:30,10,0
chr10	23939298	.	CT	C	1125.03	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.817;DP=672;FS=0.671;HRun=1;HaplotypeScore=62.2382;InbreedingCoeff=0.6196;MQ=57.17;MQ0=11;MQRankSum=2.989;QD=31.25;ReadPosRankSum=1.098;VQSLOD=3.3225;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,34:36:3.73:1203,4,0	0/0:16,0:16:45.15:0,45,719	0/0:22,0:7:18.05:0,18,264	0/0:20,0:7:0.09:0,0,98	0/0:37,0:36:99:0,105,1672	0/0:33,0:33:93.30:0,93,1461	0/0:14,0:14:39.11:0,39,575	0/0:25,0:23:69.24:0,69,1097	0/0:24,0:24:72.25:0,72,1150	0/0:20,0:20:60.20:0,60,959	0/0:28,0:28:81.26:0,81,1268	0/0:25,0:25:75.24:0,75,1174	0/0:25,0:25:75.22:0,75,1150	0/0:18,0:18:54.17:0,54,839	0/0:15,0:15:45.15:0,45,719	0/0:23,0:23:69.21:0,69,1055	0/0:30,0:30:84.27:0,84,1312	0/0:22,0:22:66.17:0,66,1017	0/0:23,0:21:63.18:0,63,958	0/0:39,0:39:99:0,114,1772	0/0:19,0:19:57.19:0,57,911	0/0:18,0:18:54.16:0,54,837	0/0:20,0:20:60.19:0,60,931	0/0:24,0:24:72.25:0,72,1150	0/0:26,0:26:75.22:0,75,1151	0/0:36,0:36:99:0,105,1658	0/0:24,0:24:72.23:0,72,1123	0/0:10,0:10:30.05:0,30,427
chr10	23942402	.	AT	A	2064.21	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=5.498;DP=299;FS=29.766;HRun=9;HaplotypeScore=34.3801;InbreedingCoeff=0.8631;MQ=74.44;MQ0=0;MQRankSum=-0.999;QD=19.47;ReadPosRankSum=0.953;VQSLOD=1.9336;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:19:43.07:0,43,262	0/0:6,0:6:18.05:0,18,208	0/1:13,0:12:10.06:10,0,166	0/0:3,0:2:6.02:0,6,66	0/0:10,0:11:23.90:0,24,257	0/0:11,0:11:30.09:0,30,346	0/0:8,0:8:15.04:0,15,173	0/0:18,0:18:51.14:0,51,580	0/0:5,0:5:15.04:0,15,173	1/1:5,11:16:33.01:302,33,0	1/1:0,16:16:48.03:439,48,0	0/0:7,0:8:23.89:0,24,241	0/0:10,0:10:27.08:0,27,311	0/0:10,0:10:27.08:0,27,310	0/0:6,0:6:18.04:0,18,198	0/0:6,0:6:18.05:0,18,208	1/1:0,21:21:63.03:577,63,0	1/1:0,5:5:15.01:137,15,0	1/1:2,10:12:30.01:274,30,0	1/1:1,8:9:21.01:192,21,0	1/1:2,12:14:36.01:330,36,0	0/0:11,0:11:27.08:0,27,310	0/0:9,0:9:18.04:0,18,197	0/0:12,0:12:33.09:0,33,372	0/0:12,0:12:36.11:0,36,413	0/0:13,1:15:14.49:0,14,402	0/0:10,0:10:21.06:0,21,242	0/0:3,0:3:6.02:0,6,69
chr10	23942525	.	ATATATATATATATATATATATATATATATATATT	A	198.29	PASS	AB=0.571;AC=1;AF=0.071;AN=14;BaseQRankSum=1.470;DP=39;FS=0.000;HRun=0;HaplotypeScore=47.3574;MQ=52.68;MQ0=6;MQRankSum=0.134;QD=16.52;ReadPosRankSum=1.470;VQSLOD=0.6593;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:1,0:1:3.01:0,3,235	./.	./.	0/0:16,0:3:3.95:0,4,50	./.	./.	./.	0/0:5,0:4:9.03:0,9,493	./.	./.	./.	./.	./.	./.	./.	./.	0/1:3,9:11:30.86:265,0,31	./.	./.	./.	./.	./.	./.	./.	./.	0/0:1,0:1:3.01:0,3,241	0/0:1,0:1:3.01:0,3,208	0/0:2,0:2:6.02:0,6,330
chr10	23942701	.	GGT	G	734.59	PASS	AB=0.892;AC=21;AF=0.457;AN=46;BaseQRankSum=5.155;DP=368;FS=16.646;HRun=0;HaplotypeScore=45.3955;InbreedingCoeff=0.0985;MQ=66.80;MQ0=21;MQRankSum=0.312;QD=3.40;ReadPosRankSum=-0.987;VQSLOD=0.2666;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:16:11.36:56,11,0	0/0:4,0:4:6:0,6,68	./.	0/1:33,0:12:0:0,0,0	1/1:4,2:6:6.01:65,6,0	1/1:7,0:9:2.84:14,3,0	0/1:17,0:17:46.42:46,0,149	0/0:23,0:21:2.49:0,2,6	0/0:8,0:12:6:0,6,52	./.	1/1:6,1:10:8.69:60,9,0	0/0:5,0:4:9.02:0,9,103	0/1:7,1:8:23.38:23,0,80	0/1:12,0:12:4.16:4,0,75	0/0:14,0:14:12.04:0,12,178	0/0:18,0:17:21.07:0,21,311	0/1:14,6:22:8.43:206,0,8	0/1:15,3:18:24.04:86,0,24	./.	0/1:5,2:7:15.85:56,0,16	1/1:14,5:18:5.98:65,6,0	0/0:5,0:5:6.02:0,6,89	./.	0/1:17,4:19:70.80:112,0,71	./.	0/1:12,1:13:23.40:23,0,45	0/0:9,0:9:6.02:0,6,89	1/1:1,2:3:6.02:65,6,0
chr10	23944303	.	CAAA	C	3604.01	PASS	AB=0.545;AC=21;AF=0.375;AN=56;BaseQRankSum=5.932;DP=527;FS=2.331;HRun=16;HaplotypeScore=99.0412;InbreedingCoeff=0.9221;MQ=67.06;MQ0=12;MQRankSum=-3.106;QD=18.20;ReadPosRankSum=4.575;VQSLOD=3.0685;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,1:22:44.30:302,44,0	0/0:5,0:5:12.04:0,12,214	0/0:39,0:17:19.56:0,20,178	0/0:33,0:13:20.36:0,20,189	0/0:12,0:31:72.22:0,72,1047	0/0:14,0:16:39.08:0,39,596	0/0:14,0:13:28.34:0,28,485	0/0:20,0:21:36.06:0,36,531	0/0:11,0:12:27.07:0,27,445	1/1:7,12:19:38.96:409,39,0	1/1:7,13:21:46.24:479,46,0	0/0:13,0:13:36.10:0,36,560	0/0:19,0:21:60.15:0,60,983	0/0:12,0:12:17.71:0,18,270	0/0:11,0:13:36.10:0,36,592	0/0:16,0:17:7.72:0,8,394	1/1:4,12:16:38.81:399,39,0	1/1:3,9:12:20.98:226,21,0	0/1:2,5:12:4.17:160,0,4	1/1:5,22:27:65.87:695,66,0	1/1:4,9:13:29.96:308,30,0	0/0:14,0:18:33.97:0,34,454	0/0:18,0:20:54.09:0,54,808	0/0:18,0:20:48.04:0,48,783	0/0:16,0:20:48.10:0,48,725	1/1:3,0:23:33.72:258,34,0	1/1:1,0:22:49.73:297,50,0	1/1:3,0:7:12.54:70,13,0
chr10	23944608	.	AT	A	3814.14	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=12.070;DP=455;FS=3.059;HRun=4;HaplotypeScore=41.4448;InbreedingCoeff=0.9932;MQ=75.13;MQ0=0;MQRankSum=-0.086;QD=31.26;ReadPosRankSum=2.396;VQSLOD=3.8202;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,13:13:39.12:467,39,0	0/0:7,0:7:21.07:0,21,294	0/0:12,0:12:33.11:0,33,462	0/0:6,0:6:14.41:0,14,174	0/0:25,0:25:60.16:0,60,818	0/0:21,0:21:63.19:0,63,851	0/0:10,0:10:27.08:0,27,362	0/0:39,0:39:99:0,108,1484	0/0:11,0:11:30.10:0,30,419	1/1:2,20:21:57.17:683,57,0	1/1:1,14:15:36.11:432,36,0	0/0:11,0:11:27.09:0,27,378	0/0:22,0:22:63.20:0,63,866	0/0:19,0:19:57.19:0,57,798	0/0:11,0:11:33.11:0,33,462	0/0:8,0:8:24.08:0,24,336	1/1:1,20:21:54.16:648,54,0	1/1:0,12:12:30.09:360,30,0	1/1:2,11:13:33.10:396,33,0	1/1:1,16:17:48.15:576,48,0	1/1:2,7:9:21.06:252,21,0	0/0:14,0:14:39.10:0,39,512	0/0:18,0:18:48.16:0,48,671	0/0:7,0:7:18.06:0,18,252	0/0:22,0:22:63.19:0,63,862	0/0:26,1:27:36.23:0,36,926	0/0:28,0:28:84.26:0,84,1144	0/0:15,0:15:45.15:0,45,630
chr10	23944708	.	AAT	A	5574.99	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=12.873;DP=385;FS=4.427;HRun=0;HaplotypeScore=46.5741;InbreedingCoeff=0.9330;MQ=68.19;MQ0=2;MQRankSum=0.720;QD=31.32;ReadPosRankSum=2.589;VQSLOD=6.3813;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,5:5:15.05:195,15,0	0/0:7,0:7:21.07:0,21,357	0/0:7,0:6:11.97:0,12,155	0/0:8,0:6:9.48:0,9,112	0/0:27,0:27:75.21:0,75,1196	0/0:12,0:11:27.08:0,27,423	0/0:3,0:3:6.02:0,6,102	0/0:29,0:29:39.75:0,40,1211	0/0:12,0:12:36.12:0,36,612	1/1:3,20:23:60.15:761,60,0	1/1:1,14:15:39.08:488,39,0	0/0:12,0:12:36.12:0,36,612	0/0:12,0:12:36.12:0,36,612	0/0:16,0:16:48.16:0,48,810	0/0:10,0:10:24.08:0,24,408	0/0:10,0:10:18.06:0,18,306	1/1:1,7:8:18.06:234,18,0	1/1:5,8:13:30.10:390,30,0	1/1:3,16:19:48.12:606,48,0	1/1:3,21:23:54.18:702,54,0	1/1:0,6:6:18.06:234,18,0	0/0:5,0:5:9.03:0,9,153	0/0:16,0:16:42.14:0,42,714	0/0:1,0:1:3.01:0,3,51	0/0:20,0:20:48.16:0,48,816	1/1:2,23:24:66.21:858,66,0	1/1:3,23:26:66.18:835,66,0	1/1:7,7:14:21.07:273,21,0
chr10	23944779	.	TG	T	449.86	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.105;DP=387;FS=2.289;HRun=1;HaplotypeScore=46.2793;InbreedingCoeff=0.6575;MQ=64.54;MQ0=2;MQRankSum=-0.588;QD=32.13;ReadPosRankSum=1.277;VQSLOD=3.3173;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,14:14:39.13:544,39,0	0/0:9,0:9:27.09:0,27,429	0/0:3,0:3:6.01:0,6,74	0/0:6,0:5:8.15:0,8,134	0/0:26,0:26:75.19:0,75,1147	0/0:16,0:16:48.14:0,48,724	0/0:6,0:6:18.06:0,18,288	0/0:36,0:36:99:0,108,1699	0/0:9,0:9:27.09:0,27,429	0/0:24,0:24:72.24:0,72,1129	0/0:18,0:18:54.18:0,54,860	0/0:8,0:8:24.08:0,24,378	0/0:12,0:12:36.11:0,36,551	0/0:14,0:14:42.14:0,42,671	0/0:6,0:6:18.06:0,18,285	0/0:6,0:6:18.06:0,18,288	0/0:13,0:13:39.13:0,39,621	0/0:18,0:18:54.18:0,54,861	0/0:23,0:23:69.19:0,69,1011	0/0:15,0:14:42.14:0,42,665	0/0:6,0:6:15.05:0,15,240	0/0:1,0:1:3.01:0,3,48	0/0:10,0:10:30.09:0,30,456	0/0:2,0:2:6.02:0,6,96	0/0:19,0:19:57.18:0,57,887	0/0:30,0:29:87.30:0,87,1387	0/0:30,0:30:87.28:0,87,1356	0/0:7,0:7:21.07:0,21,335
chr10	23944871	.	T	TTGTGTGTGTG	4756.50	PASS	AB=0.790;AC=18;AF=0.321;AN=56;BaseQRankSum=-1.430;DP=546;FS=8.137;HRun=0;HaplotypeScore=153.0791;InbreedingCoeff=0.7763;MQ=54.88;MQ0=7;MQRankSum=-8.614;QD=22.65;ReadPosRankSum=-4.471;VQSLOD=1.7949;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:28:38.12:636,38,0	0/0:9,0:9:24.08:0,24,668	0/0:39,0:18:24.08:0,24,693	0/1:28,0:14:18.24:18,0,178	0/0:28,0:28:54.07:0,54,1391	0/0:22,0:22:54.17:0,54,1499	0/0:6,0:6:18.04:0,18,421	0/0:33,0:33:66.15:0,66,1400	0/0:12,0:12:30.10:0,30,820	1/1:8,10:18:33.05:1378,33,0	1/1:11,10:22:15.05:755,15,0	0/0:12,0:12:36.11:0,36,997	0/0:15,0:15:36.11:0,36,1037	0/0:11,0:11:30.10:0,30,918	0/0:19,0:19:51.15:0,51,1385	0/0:15,0:15:30.10:0,30,879	1/1:5,11:18:12.04:509,12,0	1/1:8,6:15:6.02:303,6,0	1/1:13,4:22:33.04:737,33,0	1/1:8,10:19:15.05:364,15,0	1/1:9,0:9:3:25,3,0	0/0:15,0:15:39.12:0,39,1089	0/0:22,0:22:51.14:0,51,1385	0/0:12,0:12:36.09:0,36,887	0/0:24,0:23:53.50:0,54,1415	0/1:8,0:28:31.01:31,0,332	0/0:9,0:33:59.94:0,60,709	0/0:2,0:7:18.03:0,18,238
chr10	23946240	.	T	TA	3512.14	PASS	AB=0.600;AC=13;AF=0.232;AN=56;BaseQRankSum=-11.609;DP=663;FS=0.762;HRun=10;HaplotypeScore=67.2208;InbreedingCoeff=0.8885;MQ=77.25;MQ0=0;MQRankSum=0.480;QD=23.26;ReadPosRankSum=-0.146;VQSLOD=4.2078;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:2,0:33:61.11:0,61,177	0/0:11,0:11:26.96:0,27,221	0/0:21,0:18:31.61:0,32,270	0/0:19,0:19:38.47:0,38,295	0/0:27,0:28:67.76:0,68,531	0/0:12,0:14:37.01:0,37,279	0/0:13,0:14:37.99:0,38,301	0/0:38,0:40:91.38:0,91,760	0/0:24,0:24:56.92:0,57,468	1/1:7,24:31:52.10:700,52,0	1/1:2,19:21:54.10:564,54,0	0/0:23,0:23:29.79:0,30,391	0/0:24,0:24:50.87:0,51,415	0/0:28,1:30:42.89:0,43,557	0/0:23,0:23:59.90:0,60,489	0/0:28,0:30:53.12:0,53,510	1/1:1,14:16:41.94:430,42,0	0/1:3,6:9:8.02:141,0,8	1/1:8,30:39:68.35:886,68,0	1/1:8,16:24:48:472,48,0	1/1:0,11:11:30.08:320,30,0	0/0:26,0:27:70.83:0,71,563	0/0:26,1:27:30.89:0,31,455	0/0:17,2:20:12:0,12,294	0/0:23,0:23:62.89:0,63,513	0/0:34,3:37:5.91:0,6,667	0/0:35,0:36:88.84:0,89,710	0/0:8,0:8:23.94:0,24,192
chr10	23947633	.	CAA	C	953.85	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.197;DP=610;FS=5.340;HRun=3;HaplotypeScore=87.8087;InbreedingCoeff=0.9821;MQ=86.44;MQ0=0;MQRankSum=-5.336;QD=36.69;ReadPosRankSum=-0.820;VQSLOD=3.0002;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,24:26:69.23:1049,69,0	0/0:9,0:9:27.09:0,27,522	0/0:20,0:20:57.57:0,58,945	0/0:24,0:24:56.58:0,57,1104	0/0:28,0:28:81.27:0,81,1522	0/0:33,0:33:96.33:0,96,1855	0/0:10,0:10:30.10:0,30,580	0/0:31,0:31:90.30:0,90,1666	0/0:19,0:19:57.20:0,57,1095	0/0:25,0:25:72.25:0,72,1378	0/0:25,0:25:75.24:0,75,1406	0/0:18,0:18:54.14:0,54,994	0/0:14,0:14:42.13:0,42,779	0/0:20,0:20:60.21:0,60,1148	0/0:32,0:32:96.33:0,96,1849	0/0:19,0:18:54.19:0,54,1042	0/0:21,0:21:63.18:0,63,1139	0/0:7,0:7:14.94:0,15,272	0/0:20,0:20:60.21:0,60,1141	0/0:32,0:32:96.33:0,96,1849	0/0:19,0:19:54.19:0,54,1036	0/0:17,0:17:48.16:0,48,876	0/0:32,0:32:96.31:0,96,1797	0/0:21,0:21:60.15:0,60,1089	0/0:14,0:14:42.13:0,42,780	0/0:25,0:25:75.25:0,75,1415	0/0:39,0:39:99:0,117,2254	0/0:10,0:10:30.10:0,30,580
chr10	23947657	.	A	AT	634.35	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.455;DP=593;FS=0.000;HRun=6;HaplotypeScore=76.2811;InbreedingCoeff=0.9966;MQ=79.68;MQ0=0;MQRankSum=-5.937;QD=23.49;ReadPosRankSum=-1.943;VQSLOD=2.2178;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,19:27:60.17:729,60,0	0/0:10,0:10:30.05:0,30,299	0/0:18,0:19:50.60:0,51,493	0/0:14,0:14:30.50:0,31,294	0/0:25,0:25:75.15:0,75,756	0/0:27,0:27:69.15:0,69,704	0/0:11,0:11:33.06:0,33,329	0/0:35,0:35:93.18:0,93,937	0/0:18,0:18:48.11:0,48,489	0/0:30,0:30:84.18:0,84,854	0/0:25,0:25:63.09:0,63,623	0/0:22,0:22:63.11:0,63,628	0/0:14,0:14:42.10:0,42,429	0/0:17,0:17:45.09:0,45,453	0/0:32,0:32:81.16:0,81,820	0/0:20,0:19:60.14:0,60,612	0/0:15,0:15:42.10:0,42,428	0/0:10,0:10:27.06:0,27,275	0/0:22,0:22:48.06:0,48,466	0/0:27,0:27:75.16:0,75,759	0/0:11,0:11:30.04:0,30,292	0/0:18,0:18:51.12:0,51,520	0/0:30,0:30:84.19:0,84,857	0/0:22,0:22:51.11:0,51,520	0/0:21,0:21:60.13:0,60,612	0/0:20,0:20:54.12:0,54,551	0/0:41,0:41:99:0,108,1094	0/0:10,0:10:30.07:0,30,306
chr10	23948158	.	A	AATATAAT	1803.72	PASS	AB=0.991;AC=20;AF=0.435;AN=46;BaseQRankSum=1.159;DP=181;FS=20.145;HRun=0;HaplotypeScore=37.9256;InbreedingCoeff=0.4920;MQ=81.82;MQ0=8;MQRankSum=-4.714;QD=15.29;ReadPosRankSum=0.780;VQSLOD=0.6287;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:2,0:3:1.82:0,2,5	0/0:3,0:3:6.02:0,6,152	0/1:22,0:7:3.92:4,0,70	0/1:52,0:19:33.75:34,0,99	0/0:2,0:2:6.02:0,6,152	./.	./.	0/0:30,0:30:87.28:0,87,2036	0/0:1,0:1:3.01:0,3,76	1/1:0,1:1:3.01:118,3,0	1/1:0,2:2:3.01:118,3,0	0/0:2,0:2:3.01:0,3,76	0/0:4,0:4:9.03:0,9,228	0/0:3,0:3:9.03:0,9,228	0/0:2,0:2:6.02:0,6,152	0/0:3,0:3:9.03:0,9,161	1/1:2,8:10:12:373,12,0	1/1:4,0:4:12.04:403,12,0	1/1:3,4:7:13.60:456,14,0	1/1:0,0:2:6.02:149,6,0	./.	./.	0/0:1,0:1:3.01:0,3,76	./.	0/0:8,0:8:24.08:0,24,581	1/1:0,0:2:2.69:73,3,0	1/1:1,0:5:5.61:84,6,0	1/1:2,0:9:6.02:149,6,0
chr10	23949045	.	A	AT	6461.43	PASS	AB=0.667;AC=21;AF=0.375;AN=56;BaseQRankSum=-13.554;DP=537;FS=4.026;HRun=7;HaplotypeScore=48.6304;InbreedingCoeff=0.9231;MQ=80.50;MQ0=0;MQRankSum=-3.349;QD=30.05;ReadPosRankSum=3.044;VQSLOD=5.2324;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,16:17:42.13:507,42,0	0/0:11,0:11:33.05:0,33,319	0/0:15,0:14:33.05:0,33,317	0/0:13,0:13:29.57:0,30,265	0/0:27,0:27:69.10:0,69,666	0/0:28,0:28:75.12:0,75,724	0/0:10,0:10:30.05:0,30,290	0/0:32,0:32:75.10:0,75,720	0/0:16,0:16:45.07:0,45,434	1/1:1,23:24:69.21:833,69,0	1/1:3,27:30:75.19:890,75,0	0/0:17,0:17:42.06:0,42,405	0/0:21,0:21:60.08:0,60,575	0/0:25,0:25:66.10:0,66,637	0/0:19,0:19:54.09:0,54,522	0/0:19,0:19:57.08:0,57,545	1/1:2,10:12:27.08:326,27,0	0/1:4,4:8:12.20:97,0,12	1/1:1,14:15:42.13:507,42,0	1/1:3,25:28:69.13:801,69,0	1/1:2,12:14:33.10:399,33,0	0/0:15,0:15:31.11:0,31,311	0/0:24,0:24:69.09:0,69,662	0/0:13,0:13:39.06:0,39,377	0/0:17,0:17:51.08:0,51,493	1/1:2,21:24:66.05:762,66,0	1/1:4,35:39:99:1196,99,0	1/1:0,4:4:12.04:145,12,0
chr10	23949551	.	G	GA	3805.82	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=6.781;DP=585;FS=0.752;HRun=9;HaplotypeScore=69.3107;InbreedingCoeff=0.9859;MQ=77.14;MQ0=0;MQRankSum=-3.159;QD=19.03;ReadPosRankSum=0.726;VQSLOD=3.8588;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:62.86:0,63,536	0/0:9,0:9:20.99:0,21,182	0/0:17,0:17:29.91:0,30,249	0/0:21,0:21:34.87:0,35,271	0/0:20,0:20:56.97:0,57,491	0/0:27,0:27:71.97:0,72,621	0/0:19,0:19:47.98:0,48,417	0/0:31,0:31:68.96:0,69,594	0/0:22,0:22:53.96:0,54,465	1/1:6,23:29:66.16:719,66,0	1/1:3,20:24:56.90:585,57,0	0/0:21,0:21:56.94:0,57,483	0/0:32,0:32:86.96:0,87,755	0/0:16,0:16:38.98:0,39,338	0/0:24,0:24:62.96:0,63,543	0/0:26,0:26:74.96:0,75,648	1/1:4,18:22:22.05:472,22,0	1/1:1,2:2:7.26:69,7,0	1/1:3,13:16:39.11:431,39,0	1/1:6,21:27:31.02:544,31,0	1/1:3,8:11:24.06:266,24,0	0/0:15,0:15:41.96:0,42,358	0/0:24,0:24:62.99:0,63,547	0/0:15,0:15:29.98:0,30,260	0/0:19,0:19:41.96:0,42,365	1/1:3,1:19:43.07:239,43,0	1/1:2,1:32:67.38:339,67,0	1/1:1,1:17:28.41:142,28,0
chr10	23953655	.	C	CAA	1991.18	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=10.460;DP=533;FS=0.559;HRun=7;HaplotypeScore=80.1117;InbreedingCoeff=0.8735;MQ=67.39;MQ0=0;MQRankSum=-2.513;QD=29.72;ReadPosRankSum=1.912;VQSLOD=3.5677;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:54.13:0,54,615	0/0:10,0:10:27.08:0,27,313	0/1:10,0:8:3.78:4,0,151	0/0:11,0:10:26.64:0,27,271	0/0:33,0:33:93.18:0,93,1015	0/0:23,0:23:63.17:0,63,734	0/0:19,0:19:51.14:0,51,592	0/0:25,0:26:56.46:0,56,745	0/0:13,0:13:33.10:0,33,383	0/0:29,0:29:81.23:0,81,941	0/0:25,0:25:69.18:0,69,789	0/0:16,0:16:45.12:0,45,523	0/0:15,0:15:42.11:0,42,477	0/0:21,0:21:60.14:0,60,684	0/0:30,0:30:72.17:0,72,816	0/0:14,0:14:17.39:0,17,419	0/0:23,0:23:69.15:0,69,777	0/0:12,0:12:33.09:0,33,381	0/0:19,0:19:51.15:0,51,593	0/0:27,0:27:75.19:0,75,850	0/0:12,0:12:30.06:0,30,336	0/0:9,0:9:18.05:0,18,209	0/0:24,0:24:57.16:0,57,663	0/0:9,0:9:27.08:0,27,313	0/0:26,0:26:74.03:0,74,843	1/1:1,20:21:57.16:859,57,0	1/1:1,26:27:53.96:881,54,0	1/1:0,9:9:24.08:392,24,0
chr10	23954263	.	CA	C	1490.82	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=10.736;DP=735;FS=0.000;HRun=5;HaplotypeScore=101.2148;InbreedingCoeff=0.9984;MQ=66.53;MQ0=0;MQRankSum=-2.533;QD=26.62;ReadPosRankSum=-0.062;VQSLOD=2.7499;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:69.20:0,69,907	0/0:11,0:11:33.08:0,33,431	0/0:26,0:25:66.19:0,66,828	0/0:15,0:14:36.08:0,36,424	0/0:38,0:38:99:0,114,1493	0/0:35,0:35:99:0,102,1351	0/0:20,0:20:54.18:0,54,738	0/0:28,0:28:81.27:0,81,1108	0/0:32,0:32:90.29:0,90,1218	0/0:42,0:42:99:0,117,1538	0/0:17,0:17:48.13:0,48,613	0/0:23,0:23:66.17:0,66,860	0/0:46,0:46:99:0,132,1759	0/0:25,0:25:66.22:0,66,903	0/0:40,0:40:99:0,114,1543	0/0:25,0:25:72.22:0,72,955	0/0:30,0:30:86.47:0,86,1136	0/0:17,0:17:48.15:0,48,637	0/0:18,0:17:45.14:0,45,602	0/0:36,0:35:99:0,99,1329	0/0:25,0:25:72.20:0,72,936	0/0:26,0:26:72.20:0,72,938	0/0:24,0:24:69.20:0,69,899	0/0:25,0:25:63.21:0,63,861	0/0:31,0:31:84.27:0,84,1133	1/1:3,24:27:66.13:715,66,0	1/1:1,21:22:60.17:680,60,0	1/1:0,7:7:21.06:238,21,0
chr10	23955012	.	TAA	T	720.94	PASS	AC=4;AF=0.087;AN=46;BaseQRankSum=2.294;DP=361;FS=24.487;HRun=7;HaplotypeScore=48.1705;InbreedingCoeff=0.6706;MQ=26.99;MQ0=114;MQRankSum=0.827;QD=18.49;ReadPosRankSum=2.116;VQSLOD=0.2036;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	0/0:4,0:4:12.04:0,12,210	./.	./.	0/0:14,0:13:8.99:0,9,125	0/0:13,0:11:15.05:0,15,262	0/0:21,0:7:21.03:0,21,334	0/0:13,0:7:15.04:0,15,237	0/0:11,0:9:12:0,12,169	0/0:14,0:14:36.09:0,36,573	0/0:12,0:9:15.05:0,15,262	0/0:15,0:12:24:0,24,355	0/0:13,0:9:5.90:0,6,40	0/0:20,0:16:15.05:0,15,259	0/0:22,0:17:36.02:0,36,564	0/0:14,0:13:11.78:0,12,115	0/0:18,0:7:9.03:0,9,157	./.	0/0:7,0:3:9.03:0,9,157	0/0:11,0:11:33.07:0,33,544	0/0:21,0:5:5.98:0,6,72	0/0:12,0:11:18.02:0,18,282	0/0:13,0:13:18.86:0,19,251	0/0:16,0:7:6.02:0,6,105	0/0:13,0:13:36.08:0,36,596	1/1:2,23:23:7.67:672,8,0	1/1:0,14:12:12.04:153,12,0	./.
chr10	23955102	.	TG	T	859.48	PASS	AC=4;AF=0.118;AN=34;BaseQRankSum=-1.050;DP=226;FS=8.090;HRun=1;HaplotypeScore=33.4845;InbreedingCoeff=0.5817;MQ=25.92;MQ0=81;MQRankSum=-1.991;QD=28.65;ReadPosRankSum=0.977;VQSLOD=2.5879;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/0:5,0:5:15.05:0,15,238	./.	./.	0/0:18,0:17:11.94:0,12,190	0/0:6,0:2:2.94:0,3,18	0/0:8,0:2:3.01:0,3,36	./.	0/0:10,0:7:9.03:0,9,119	0/0:13,0:12:36.08:0,36,518	0/0:8,0:6:2.60:0,3,10	./.	0/0:9,0:4:3.01:0,3,48	0/0:10,0:6:5.93:0,6,65	0/0:12,0:8:16.25:0,16,200	0/0:9,0:7:12.04:0,12,168	./.	./.	./.	0/0:10,0:10:24.08:0,24,343	./.	0/0:5,0:5:6.02:0,6,81	0/0:9,0:9:9.03:0,9,143	./.	0/0:13,0:13:24.08:0,24,362	1/1:5,8:12:33.06:405,33,0	1/1:2,15:17:45.14:563,45,0	./.
chr10	23955246	.	C	CA	116.41	PASS	AB=0.750;AC=5;AF=0.156;AN=32;BaseQRankSum=3.493;DP=97;FS=9.622;HRun=0;HaplotypeScore=18.7833;InbreedingCoeff=0.4292;MQ=23.96;MQ0=28;MQRankSum=-0.619;QD=10.58;ReadPosRankSum=1.462;VQSLOD=2.3913;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	0/0:3,0:3:3.01:0,3,42	0/0:1,0:1:2.97:0,3,20	./.	0/0:6,0:6:14.88:0,15,122	0/0:10,0:9:23.83:0,24,263	./.	1/1:1,2:3:6.02:75,6,0	0/0:6,0:5:15.01:0,15,187	0/0:9,0:6:11.95:0,12,123	0/0:2,0:2:5.98:0,6,62	0/0:7,0:6:17.96:0,18,206	0/0:2,0:2:5.98:0,6,62	./.	./.	0/1:2,1:3:0.55:34,0,1	1/1:2,3:4:0.67:104,1,0	./.	0/0:6,0:6:15:0,15,185	0/0:3,0:3:6.02:0,6,83	0/0:4,0:2:3.01:0,3,42	0/0:5,0:5:15.05:0,15,209	./.	./.	./.
chr10	23955857	.	GA	G	2272.11	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=13.004;DP=524;FS=1.470;HRun=7;HaplotypeScore=59.1682;InbreedingCoeff=0.9593;MQ=74.43;MQ0=0;MQRankSum=-4.194;QD=24.97;ReadPosRankSum=2.080;VQSLOD=4.2402;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,29:30:78.17:794,78,0	0/0:7,0:7:21.06:0,21,254	0/0:12,0:12:12.03:0,12,148	0/0:16,0:15:33.09:0,33,400	0/0:22,0:22:63.20:0,63,779	0/0:20,0:20:54.16:0,54,667	0/0:11,0:11:24.08:0,24,302	0/0:28,0:28:72.22:0,72,884	0/0:16,0:16:39.12:0,39,490	0/0:22,0:22:66.21:0,66,820	0/0:18,0:18:51.16:0,51,630	0/0:22,0:22:57.16:0,57,691	0/0:17,0:17:48.15:0,48,603	0/0:16,0:16:45.13:0,45,553	0/0:21,0:21:60.17:0,60,731	0/0:20,0:20:60.17:0,60,731	0/0:19,0:19:51.16:0,51,639	0/0:10,0:10:27.09:0,27,340	0/0:20,0:20:51.16:0,51,631	0/0:29,0:29:84.25:0,84,1039	0/0:11,0:11:30.10:0,30,377	0/0:18,0:18:48.15:0,48,597	0/0:23,0:23:60.18:0,60,743	0/0:10,0:10:30.10:0,30,376	0/0:25,0:25:72.21:0,72,891	1/1:1,19:20:54.11:544,54,0	1/1:3,36:39:99:1027,102,0	1/1:0,2:2:6.01:61,6,0
chr10	23956570	.	T	TATC	3614.67	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=10.656;DP=459;FS=0.000;HRun=0;HaplotypeScore=78.8144;InbreedingCoeff=0.9254;MQ=61.42;MQ0=0;MQRankSum=-11.292;QD=46.94;ReadPosRankSum=-1.516;VQSLOD=4.9664;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,9:18:17.85:620,18,0	0/0:9,0:9:27.09:0,27,440	0/0:11,0:11:33.11:0,33,514	0/0:7,0:7:18.06:0,18,297	0/0:36,0:36:96.33:0,96,1575	0/0:11,0:11:33.11:0,33,550	0/0:7,0:7:18.06:0,18,300	0/0:31,0:31:84.27:0,84,1342	0/0:13,0:13:33.10:0,33,523	0/0:26,0:26:75.25:0,75,1209	0/0:27,0:27:75.26:0,75,1245	0/0:13,0:13:39.13:0,39,650	0/0:12,0:12:36.12:0,36,600	0/0:18,0:18:51.17:0,51,849	0/0:17,0:17:51.17:0,51,850	0/0:21,0:21:63.19:0,63,996	0/0:29,0:29:53.68:0,54,1120	0/0:11,0:11:30.06:0,30,469	0/0:15,0:15:42.14:0,42,692	0/0:22,0:22:63.22:0,63,1046	0/0:7,0:7:21.05:0,21,320	0/0:5,0:5:6.02:0,6,100	0/0:13,0:13:39.12:0,39,604	0/0:5,0:5:15.04:0,15,221	0/0:16,0:16:48.15:0,48,776	1/1:8,17:25:16.17:1258,16,0	1/1:10,20:30:81.18:1602,81,0	1/1:2,2:4:6.02:136,6,0
chr10	23956582	.	A	ACTAT	4204.96	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=7.280;DP=484;FS=0.000;HRun=0;HaplotypeScore=89.8190;InbreedingCoeff=0.9101;MQ=61.74;MQ0=0;MQRankSum=-10.599;QD=55.33;ReadPosRankSum=-0.257;VQSLOD=4.6723;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,14:20:32.43:741,32,0	0/0:8,0:8:21.06:0,21,348	0/0:17,0:16:35.65:0,36,645	0/0:9,0:9:23.94:0,24,312	0/0:32,0:31:87.26:0,87,1496	0/0:12,0:12:30.09:0,30,511	0/0:6,0:6:12.04:0,12,216	0/0:37,0:37:84.27:0,84,1446	0/0:14,0:14:33.09:0,33,561	0/0:29,0:29:81.28:0,81,1450	0/0:26,0:26:69.23:0,69,1205	0/0:14,0:14:35.94:0,36,564	0/0:17,0:17:45.15:0,45,808	0/0:18,0:18:48.13:0,48,830	0/0:21,0:20:57.15:0,57,925	0/0:21,0:21:60.07:0,60,1039	0/0:29,0:29:66.10:0,66,1105	0/0:11,0:11:21.02:0,21,342	0/0:13,0:13:36.12:0,36,644	0/0:22,0:22:51.16:0,51,882	0/0:11,0:11:30.10:0,30,517	0/0:6,0:6:18.04:0,18,294	0/0:11,0:11:30.10:0,30,539	0/0:3,0:3:9.03:0,9,162	0/0:21,0:21:51.17:0,51,890	1/1:6,15:23:6.16:1221,6,0	1/1:5,24:30:84.29:2088,84,0	1/1:0,3:3:6.02:155,6,0
chr10	23957498	.	CAAA	C	2331.54	PASS	AB=0.875;AC=9;AF=0.161;AN=56;BaseQRankSum=12.222;DP=574;FS=8.486;HRun=11;HaplotypeScore=97.0628;InbreedingCoeff=0.8724;MQ=77.25;MQ0=0;MQRankSum=-2.826;QD=24.04;ReadPosRankSum=3.494;VQSLOD=2.1322;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,9:12:21.06:276,21,0	0/0:8,0:8:24.08:0,24,482	0/0:15,0:15:23.29:0,23,415	0/1:18,1:20:11.89:12,0,263	0/0:24,0:29:72.17:0,72,1258	0/0:29,0:29:84.27:0,84,1659	0/0:18,0:18:42.14:0,42,834	0/0:26,0:26:75.26:0,75,1516	0/0:23,0:23:54.19:0,54,1062	0/0:25,0:26:69.20:0,69,1290	0/0:22,0:22:57.20:0,57,1131	0/0:14,0:15:42.12:0,42,811	0/0:20,0:23:63.15:0,63,1160	0/0:23,0:24:69.22:0,69,1356	0/0:15,0:15:33.10:0,33,614	0/0:31,0:34:82.48:0,82,1564	0/0:14,0:16:42.11:0,42,776	0/0:10,0:10:27.09:0,27,528	0/0:25,0:28:70.45:0,70,1290	0/0:26,0:28:81.26:0,81,1532	0/0:13,0:14:36.11:0,36,676	0/0:16,0:17:42.14:0,42,817	0/0:24,0:25:60.21:0,60,1194	0/0:12,0:12:33.11:0,33,663	0/0:17,0:19:57.15:0,57,1077	1/1:3,17:20:51.15:670,51,0	1/1:2,22:24:63.20:828,63,0	1/1:0,20:20:54.18:710,54,0
chr10	23957821	.	CT	C	4146.01	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=11.329;DP=711;FS=8.499;HRun=2;HaplotypeScore=81.8720;InbreedingCoeff=0.9972;MQ=88.90;MQ0=0;MQRankSum=-3.034;QD=35.44;ReadPosRankSum=3.403;VQSLOD=3.9404;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,37:39:99:1284,99,0	0/0:6,0:6:18.05:0,18,250	0/0:26,0:26:75.15:0,75,1063	0/0:25,0:25:69.16:0,69,958	0/0:31,0:31:90.22:0,90,1283	0/0:32,0:32:96.30:0,96,1399	0/0:21,0:21:63.20:0,63,923	0/0:38,0:38:99:0,111,1561	0/0:23,0:23:53.75:0,54,897	0/0:33,0:33:99:0,99,1421	0/0:23,0:23:66.22:0,66,970	0/0:24,0:24:72.23:0,72,1057	0/0:28,0:28:84.26:0,84,1209	0/0:26,0:26:78.24:0,78,1127	0/0:27,0:27:81.25:0,81,1175	0/0:25,0:25:75.24:0,75,1102	0/0:17,0:17:48.12:0,48,694	0/0:8,0:8:24.08:0,24,360	0/0:17,0:17:48.16:0,48,719	0/0:39,0:39:99:0,111,1623	0/0:22,0:22:66.19:0,66,948	0/0:21,0:21:60.17:0,60,841	0/0:31,0:31:93.27:0,93,1333	0/0:27,0:27:81.26:0,81,1177	0/0:24,0:24:72.23:0,72,1058	1/1:1,31:32:93.28:1188,93,0	1/1:0,29:29:78.25:1011,78,0	1/1:0,17:17:51.17:662,51,0
chr10	23958119	.	GA	G	1758	PASS	AB=0.900;AC=9;AF=0.161;AN=56;BaseQRankSum=9.690;DP=510;FS=2.139;HRun=9;HaplotypeScore=48.7568;InbreedingCoeff=0.8530;MQ=74.27;MQ0=0;MQRankSum=-0.276;QD=19.98;ReadPosRankSum=1.108;VQSLOD=4.0975;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,21:24:65.07:583,65,0	0/0:6,0:6:15.04:0,15,173	0/0:14,0:14:11.63:0,12,104	0/0:4,0:4:2.99:0,3,24	0/0:33,0:34:93.08:0,93,1033	0/0:19,0:19:54.16:0,54,623	0/0:16,0:16:45.13:0,45,519	0/0:14,0:14:36.10:0,36,407	0/0:14,0:15:26.91:0,27,291	0/0:29,0:29:71.25:0,71,851	0/0:22,0:22:60.14:0,60,677	0/0:18,0:18:51.13:0,51,577	0/0:19,0:19:54.15:0,54,615	0/0:12,0:13:38.95:0,39,430	0/0:16,0:16:39.11:0,39,442	0/0:16,0:16:36.11:0,36,416	0/0:15,0:15:45.13:0,45,519	0/0:10,0:10:30.09:0,30,346	0/0:12,0:12:30.09:0,30,346	0/0:45,0:45:99:0,120,1351	0/1:8,1:9:3.39:3,0,218	0/0:13,0:13:33.10:0,33,381	0/0:27,0:27:75.22:0,75,866	0/0:14,0:14:39.10:0,39,441	0/0:31,0:31:90.25:0,90,1027	1/1:6,18:24:25.41:487,25,0	1/1:5,14:19:57.01:516,57,0	1/1:0,12:12:36.02:329,36,0
chr10	23958201	.	AT	A	1474.80	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=10.086;DP=488;FS=1.043;HRun=9;HaplotypeScore=49.2345;InbreedingCoeff=0.8789;MQ=70.22;MQ0=0;MQRankSum=0.546;QD=20.48;ReadPosRankSum=1.012;VQSLOD=4.1303;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,16:21:59.02:512,59,0	0/0:3,0:3:6.02:0,6,69	0/0:14,0:7:7.34:0,7,60	0/0:16,0:9:5.11:0,5,56	0/0:26,0:26:78.16:0,78,844	0/0:20,0:20:60.17:0,60,683	0/0:7,0:7:21.05:0,21,233	0/0:20,0:20:45.11:0,45,494	0/0:16,0:16:48.14:0,48,554	0/0:27,0:27:75.19:0,75,852	0/0:25,0:25:63.18:0,63,717	0/0:17,0:17:48.12:0,48,535	0/0:15,0:15:45.10:0,45,493	0/0:15,0:15:45.13:0,45,519	0/0:17,0:17:39.09:0,39,430	0/0:20,0:20:57.16:0,57,650	0/0:19,0:19:51.11:0,51,565	0/0:11,0:11:27.06:0,27,300	0/0:21,0:21:51.14:0,51,581	0/0:33,0:33:90.16:0,90,978	0/0:4,0:4:12.04:0,12,138	0/0:11,0:11:33.10:0,33,377	0/0:20,0:20:57.12:0,57,620	0/0:13,0:13:9.05:0,9,337	0/0:26,0:26:72.20:0,72,820	1/1:3,20:23:25.41:487,25,0	1/1:2,20:22:60.03:548,60,0	1/1:3,3:6:9:82,9,0
chr10	23959018	.	GCACACACA	G	4115.98	PASS	AB=0.600;AC=17;AF=0.304;AN=56;BaseQRankSum=10.625;DP=671;FS=0.000;HRun=0;HaplotypeScore=185.4451;InbreedingCoeff=0.8081;MQ=59.86;MQ0=9;MQRankSum=-11.709;QD=20.79;ReadPosRankSum=-1.038;VQSLOD=2.9776;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:33:9.03:0,9,212	0/0:10,0:11:18.06:0,18,605	0/0:32,0:16:15.04:0,15,415	0/0:22,0:15:9.03:0,9,364	0/0:21,0:21:39.61:0,40,1358	0/0:18,0:18:43.03:0,43,1566	0/0:29,0:29:66.70:0,67,2345	0/0:32,0:33:44.95:0,45,1630	0/0:25,0:27:63.22:0,63,2448	1/1:5,21:26:57.13:1347,57,0	1/1:5,4:14:3.48:55,3,0	0/0:24,0:24:54.19:0,54,2197	0/0:31,0:34:72.25:0,72,2573	0/0:25,0:27:63.20:0,63,2232	0/0:21,0:23:42.14:0,42,1625	0/0:26,0:26:54.19:0,54,2203	1/1:9,9:19:12.04:307,12,0	0/0:6,0:6:5.99:0,6,49	1/1:11,15:27:45.15:1097,45,0	1/1:9,13:23:9.81:131,10,0	1/1:19,7:24:3.48:77,3,0	0/0:27,0:30:60.21:0,60,2256	0/0:21,0:22:35.98:0,36,1386	0/0:26,0:27:54.19:0,54,2047	0/0:23,0:24:42.14:0,42,1636	0/1:9,4:27:33.98:483,0,34	1/1:6,2:26:24.12:368,24,0	1/1:1,1:10:26.84:250,27,0
chr10	23959047	.	CACACGT	C	794.30	PASS	AB=0.934;AC=9;AF=0.161;AN=56;BaseQRankSum=12.563;DP=717;FS=3.838;HRun=0;HaplotypeScore=186.3039;InbreedingCoeff=0.0401;MQ=51.39;MQ0=14;MQRankSum=-9.263;QD=4.14;ReadPosRankSum=5.000;VQSLOD=2.3714;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:4,23:27:15.77:28,0,16	0/0:9,0:9:10.72:0,11,400	0/0:9,0:4:9.01:0,9,163	0/0:11,0:4:9.03:0,9,173	0/0:32,0:30:41.67:0,42,718	0/0:23,0:23:34:0,34,830	0/0:39,0:38:67.54:0,68,1349	0/0:47,0:46:99:0,113,1326	0/0:27,0:27:31.94:0,32,1275	0/1:33,0:31:59.96:60,0,344	0/1:17,0:17:9.87:10,0,222	0/0:32,0:32:84.28:0,84,1757	0/0:37,0:36:46.72:0,47,1715	0/0:33,0:32:6.26:0,6,1065	0/0:27,0:27:62.98:0,63,1442	0/0:23,0:23:66.16:0,66,1535	0/0:22,0:22:0.95:0,1,278	0/0:5,0:5:13.46:0,13,148	0/1:24,0:24:44.42:44,0,221	0/1:25,0:24:9.09:9,0,282	0/0:33,0:30:17.47:0,17,387	0/0:29,0:29:57.77:0,58,1649	0/0:32,0:31:38.69:0,39,759	0/0:31,0:31:48.16:0,48,1091	0/0:24,0:24:28.98:0,29,1051	0/1:31,0:31:99:301,0,430	0/1:25,0:25:99:259,0,166	1/1:10,0:9:26.51:225,27,0
chr10	23959049	.	C	CGT	887.60	PASS	AB=0.949;AC=6;AF=0.107;AN=56;BaseQRankSum=6.197;DP=719;FS=0.547;HRun=0;HaplotypeScore=147.0381;InbreedingCoeff=-0.1386;MQ=51.45;MQ0=15;MQRankSum=4.768;QD=5.07;ReadPosRankSum=-1.327;VQSLOD=3.1029;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:2.98:0,3,22	0/1:9,0:9:76.81:77,0,88	0/0:7,0:3:9:0,9,109	0/0:10,0:4:9.03:0,9,117	0/1:31,0:29:3.03:3,0,169	0/0:23,0:23:17.14:0,17,464	0/1:38,0:37:99:157,0,761	0/0:50,0:49:99:0,121,1184	0/0:26,0:26:38.74:0,39,789	0/0:33,0:31:70.93:0,71,567	0/0:17,0:17:24.07:0,24,328	0/1:33,0:33:99:383,0,665	0/1:36,2:37:99:357,0,600	0/0:32,0:31:1.09:0,1,694	0/0:27,0:27:65.77:0,66,1092	0/0:23,0:23:66.21:0,66,1028	0/0:22,0:22:29.72:0,30,344	0/0:4,0:4:12:0,12,152	0/0:24,0:24:58.15:0,58,425	0/0:26,0:25:26.54:0,27,316	0/0:34,0:31:28.28:0,28,382	0/0:30,0:30:61.45:0,61,1124	0/0:32,0:31:9.94:0,10,420	0/0:30,0:30:43.94:0,44,701	0/1:17,9:26:28.22:28,0,506	0/0:33,0:33:69.96:0,70,755	0/0:25,0:25:21.79:0,22,280	0/0:11,0:9:16.27:0,16,44
chr10	23959051	.	C	CACGTAT	2107.07	PASS	AB=0.859;AC=10;AF=0.185;AN=54;BaseQRankSum=-2.975;DP=721;FS=0.552;HRun=0;HaplotypeScore=196.0335;InbreedingCoeff=-0.2167;MQ=51.78;MQ0=14;MQRankSum=1.739;QD=6.78;ReadPosRankSum=-0.584;VQSLOD=2.6722;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:26:1.55:0,2,4	0/1:9,0:9:60.35:182,0,60	./.	0/0:9,0:3:5.91:0,6,50	0/1:9,0:32:99:186,0,102	0/1:12,11:25:61.22:61,0,250	0/1:35,0:34:99:288,0,485	0/1:51,0:51:76.32:76,0,258	0/0:19,0:27:20.41:0,20,541	0/0:34,0:32:69.87:0,70,656	0/0:17,0:17:24:0,24,332	0/1:31,0:31:99:716,0,344	0/1:38,0:38:99:664,0,335	0/0:20,0:33:10.82:0,11,497	0/0:27,0:27:71.74:0,72,964	0/0:22,0:23:66.15:0,66,896	0/0:22,0:22:32.60:0,33,417	0/0:4,0:4:9.03:0,9,138	0/0:24,0:24:51.89:0,52,447	0/0:26,0:25:30.39:0,30,405	0/0:34,0:31:29.92:0,30,406	0/0:30,0:30:83.88:0,84,1063	0/1:12,0:30:40.20:40,0,273	0/1:19,0:30:21.90:22,0,478	0/1:26,0:26:12.23:12,0,311	0/0:33,0:33:88.43:0,88,1018	0/0:26,0:26:50.53:0,51,476	0/0:11,0:9:25.57:0,26,126
chr10	23962292	.	AAAAAAAG	A	252.66	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=4.709;DP=437;FS=16.930;HRun=0;HaplotypeScore=125.4756;InbreedingCoeff=0.1897;MQ=49.12;MQ0=18;MQRankSum=-4.559;QD=2.78;ReadPosRankSum=1.841;VQSLOD=1.6884;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:8,9:17:5.08:109,5,0	0/0:9,0:9:13.23:0,13,138	0/1:17,0:5:1.12:1,0,148	0/0:13,0:5:1.26:0,1,132	0/0:23,0:23:55.45:0,55,830	0/0:12,0:12:24.06:0,24,374	0/0:11,0:10:24.02:0,24,406	0/0:26,0:26:58.55:0,59,579	0/0:16,0:16:40.53:0,41,628	0/0:22,0:22:57.52:0,58,779	0/0:25,0:25:45.91:0,46,586	0/0:9,0:9:18.09:0,18,246	0/0:20,0:19:40.54:0,41,467	0/0:19,0:18:44.76:0,45,685	0/0:16,0:14:35.90:0,36,513	0/0:9,0:9:18.06:0,18,355	0/0:14,0:14:4.07:0,4,152	0/1:13,0:11:23.81:24,0,54	0/0:24,0:23:48.29:0,48,618	0/0:24,0:23:53.47:0,53,697	0/1:5,0:4:0.03:0,0,0	0/0:5,0:4:8.95:0,9,172	0/0:22,0:21:23.66:0,24,588	0/0:7,0:7:14.52:0,15,194	0/0:18,0:17:50.54:0,51,805	0/1:17,0:17:77.73:78,0,153	0/1:22,0:22:17.70:153,0,18	0/0:2,0:2:3.93:0,4,12
chr10	23962295	.	A	AG	115.18	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=1.820;DP=437;FS=15.045;HRun=0;HaplotypeScore=86.6610;InbreedingCoeff=0.2015;MQ=49.99;MQ0=18;MQRankSum=-0.453;QD=2.26;ReadPosRankSum=-0.161;VQSLOD=1.3632;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:15,0:15:8.15:14,0,8	0/0:8,0:8:13.13:0,13,91	0/0:18,0:5:14.81:0,15,116	0/0:13,0:5:4.19:0,4,39	0/0:22,0:22:45.96:0,46,336	0/0:11,0:11:22.75:0,23,142	0/0:11,0:10:10:0,10,141	0/0:27,0:27:54.46:0,54,355	0/0:15,0:15:40.34:0,40,264	0/0:23,0:23:47.38:0,47,431	0/0:25,0:25:45.75:0,46,316	0/0:9,0:9:1.82:0,2,127	0/0:20,0:19:45.28:0,45,327	0/0:20,0:19:47.40:0,47,345	0/1:16,0:14:13.64:146,0,14	1/1:8,1:9:7.65:57,8,0	0/0:12,2:14:0.82:0,1,74	0/1:11,0:9:7.28:7,0,60	0/0:25,0:24:51.95:0,52,374	0/0:25,0:24:42.32:0,42,350	0/0:5,0:4:2.99:0,3,23	0/0:5,0:4:8.87:0,9,58	0/0:20,1:20:20.81:0,21,307	0/0:7,0:7:14.48:0,14,108	0/0:18,0:17:50.65:0,51,407	0/0:17,0:17:32.23:0,32,229	0/0:25,0:25:25.51:0,26,178	0/0:2,0:2:5.35:0,5,30
chr10	23964412	.	AATTT	A	2134.51	PASS	AB=0.514;AC=5;AF=0.093;AN=54;BaseQRankSum=8.139;DP=250;FS=38.070;HRun=0;HaplotypeScore=45.4379;InbreedingCoeff=0.5867;MQ=75.48;MQ0=0;MQRankSum=-2.663;QD=44.47;ReadPosRankSum=3.066;VQSLOD=1.6308;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:33.11:0,33,843	0/0:3,0:3:9.03:0,9,252	0/0:5,0:5:6.02:0,6,132	0/0:5,0:5:3.32:0,3,160	0/0:10,0:10:30.10:0,30,838	0/0:11,0:11:33.09:0,33,805	0/0:4,0:4:12.04:0,12,336	0/0:32,0:31:93.30:0,93,2374	0/0:2,0:2:6.02:0,6,168	0/0:8,0:8:24.08:0,24,598	0/0:11,0:11:33.10:0,33,816	0/0:7,0:7:21.07:0,21,541	0/0:8,0:8:24.07:0,24,611	0/0:4,0:4:12.04:0,12,336	0/0:8,0:8:24.07:0,24,607	0/0:5,0:5:12.04:0,12,289	0/0:11,0:11:30.10:0,30,791	0/0:4,0:4:9.03:0,9,251	0/0:6,0:6:18.05:0,18,346	0/0:11,0:11:33.09:0,33,804	./.	0/0:3,0:3:9.03:0,9,252	0/0:10,0:10:24.07:0,24,611	0/0:5,0:5:15.05:0,15,326	0/0:15,0:15:42.14:0,42,1155	0/1:1,18:19:29.01:963,0,29	1/1:2,9:11:33.10:607,33,0	1/1:0,18:18:36.12:692,36,0
chr10	23964469	.	GTA	G	1343.60	PASS	AB=0.826;AC=22;AF=0.458;AN=48;BaseQRankSum=8.541;DP=178;FS=13.993;HRun=0;HaplotypeScore=37.8028;InbreedingCoeff=0.5742;MQ=65.89;MQ0=0;MQRankSum=-2.942;QD=13.30;ReadPosRankSum=5.000;VQSLOD=1.7179;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,6:9:18.06:218,18,0	./.	./.	0/0:7,0:3:0.89:0,1,2	0/1:8,2:10:15.32:15,0,252	0/0:9,0:9:24.08:0,24,382	./.	0/0:33,0:33:69.21:0,69,1043	0/0:2,0:2:6.02:0,6,97	1/1:0,11:11:33.10:400,33,0	1/1:2,0:2:6:51,6,0	0/0:3,0:3:6.02:0,6,88	0/0:4,0:4:9.03:0,9,145	0/0:2,0:2:6.01:0,6,75	0/0:6,0:6:6.02:0,6,97	0/0:2,0:2:3:0,3,25	1/1:3,6:9:9.03:109,9,0	1/1:0,5:5:15.05:182,15,0	1/1:1,3:5:8.86:87,9,0	1/1:1,2:3:3.01:36,3,0	0/0:0,0:1:0.47:0,0,1	0/0:2,0:2:6.02:0,6,97	./.	0/0:2,0:2:6.02:0,6,97	0/1:7,2:9:15.35:15,0,219	1/1:4,1:19:39.92:217,40,0	1/1:3,0:11:19.89:98,20,0	1/1:2,0:8:17.04:84,17,0
chr10	23966306	.	GA	G	489.24	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.369;DP=493;FS=5.017;HRun=2;HaplotypeScore=45.1456;InbreedingCoeff=0.8236;MQ=73.89;MQ0=0;MQRankSum=-2.858;QD=27.18;ReadPosRankSum=1.171;VQSLOD=3.0488;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,17:18:45.15:584,45,0	0/0:8,0:8:24.08:0,24,358	0/0:12,0:12:3.34:0,3,448	0/0:11,0:11:30.10:0,30,439	0/0:36,0:36:99:0,105,1516	0/0:20,0:20:60.19:0,60,877	0/0:9,0:9:24.08:0,24,358	0/0:28,0:28:84.26:0,84,1205	0/0:17,0:17:48.16:0,48,719	0/0:32,0:32:93.31:0,93,1388	0/0:15,0:15:45.14:0,45,653	0/0:16,0:16:45.14:0,45,654	0/0:25,0:25:72.23:0,72,1056	0/0:11,0:11:33.11:0,33,493	0/0:12,0:12:33.10:0,33,475	0/0:27,0:27:81.27:0,81,1214	0/0:12,0:12:30.09:0,30,429	0/0:4,0:4:12.04:0,12,180	0/0:21,0:21:63.21:0,63,928	0/0:24,0:24:72.24:0,72,1078	0/0:7,0:7:21.05:0,21,294	0/0:13,0:13:39.13:0,39,584	0/0:18,0:18:51.17:0,51,762	0/0:8,0:8:24.08:0,24,360	0/0:32,0:32:96.30:0,96,1400	0/0:29,0:29:87.27:0,87,1251	0/0:21,0:21:63.21:0,63,937	0/0:7,0:7:21.07:0,21,311
chr10	23968376	.	CATATTATATT	C	1195.11	PASS	AC=12;AF=0.286;AN=42;BaseQRankSum=2.301;DP=260;FS=9.283;HRun=0;HaplotypeScore=83.6769;InbreedingCoeff=0.6626;MQ=81.84;MQ0=4;MQRankSum=-1.815;QD=20.61;ReadPosRankSum=0.576;VQSLOD=0.7765;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:12:24.08:0,24,1009	0/0:4,0:5:3.01:0,3,131	0/0:14,0:10:5.81:0,6,72	0/0:36,0:19:20.08:0,20,260	0/0:6,0:6:9.03:0,9,278	0/0:1,0:2:3.01:0,3,131	./.	0/0:45,0:43:78.25:0,78,2293	./.	1/1:2,4:6:12.04:363,12,0	1/1:6,2:8:3.01:52,3,0	0/0:2,0:2:3.01:0,3,129	./.	0/0:6,0:6:6.02:0,6,184	0/0:8,0:8:9.03:0,9,426	0/0:8,0:8:6.02:0,6,302	1/1:11,8:19:6.02:180,6,0	1/1:7,0:7:6.02:86,6,0	1/1:4,5:9:15.03:317,15,0	1/1:4,5:9:15.05:343,15,0	./.	./.	./.	./.	0/0:5,0:8:12.04:0,12,316	0/0:5,0:7:6.01:0,6,57	0/0:5,0:7:9.02:0,9,98	0/0:14,0:15:21.04:0,21,256
chr10	23968444	.	C	CTT	991.94	PASS	AC=8;AF=0.148;AN=54;BaseQRankSum=-2.443;DP=190;FS=1.687;HRun=7;HaplotypeScore=36.1412;InbreedingCoeff=0.7133;MQ=59.91;MQ0=1;MQRankSum=-0.201;QD=30.06;ReadPosRankSum=1.537;VQSLOD=2.5904;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,0:8:9.79:40,10,0	./.	0/0:7,0:6:15.04:0,15,173	0/0:3,0:2:3.01:0,3,35	0/0:6,0:6:15.01:0,15,158	0/0:3,0:3:9.03:0,9,105	0/0:3,0:3:9.01:0,9,93	0/0:34,0:33:84.17:0,84,958	0/0:2,0:2:6:0,6,59	0/0:4,0:4:12.04:0,12,140	0/0:8,0:8:24.07:0,24,279	0/0:4,0:4:12.04:0,12,140	0/0:6,0:6:18.05:0,18,210	0/0:3,0:3:9.03:0,9,105	0/0:5,0:5:15.04:0,15,175	0/0:2,0:2:3.01:0,3,35	0/0:21,0:21:57.13:0,57,650	0/0:7,0:7:18.05:0,18,210	0/0:11,0:10:27.08:0,27,314	0/0:9,0:9:27.01:0,27,297	0/0:4,0:4:12.04:0,12,140	0/0:2,0:2:6.02:0,6,70	0/0:3,0:3:9.03:0,9,101	0/0:2,0:2:2.74:0,3,35	0/0:8,0:8:18.05:0,18,210	1/1:2,2:4:12.03:166,12,0	1/1:0,11:11:33.11:541,33,0	1/1:1,9:10:23.93:393,24,0
chr10	23970895	.	TAC	T	566.16	PASS	AB=0.963;AC=16;AF=0.296;AN=54;BaseQRankSum=-0.782;DP=514;FS=4.436;HRun=0;HaplotypeScore=89.3658;InbreedingCoeff=-0.4088;MQ=51.73;MQ0=20;MQRankSum=2.059;QD=1.66;ReadPosRankSum=-3.714;VQSLOD=0.5473;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:16:7.13:0,7,48	0/1:8,0:7:24.53:25,0,83	0/0:5,0:1:2.94:0,3,18	./.	0/0:22,0:22:22.60:0,23,279	0/0:22,0:21:24.63:0,25,301	0/1:24,0:24:11.55:12,0,148	0/1:21,0:15:5.61:6,0,92	0/0:15,0:15:18.05:0,18,247	0/1:24,0:22:62.60:63,0,186	0/1:9,9:18:40.39:76,0,40	0/0:15,0:14:15.88:0,16,165	0/0:14,0:14:22.03:0,22,204	0/1:24,0:24:10.02:10,0,212	0/0:8,0:16:5.92:0,6,72	0/0:6,0:5:8.19:0,8,38	0/1:24,0:23:23.03:23,0,42	0/1:15,0:14:76.10:78,0,76	0/1:26,0:25:28.23:28,0,31	0/1:22,1:23:5.44:145,0,5	0/1:26,0:23:31.46:112,0,31	0/1:9,0:10:39.97:40,0,262	0/0:18,0:17:32.84:0,33,450	0/1:34,9:42:22.47:22,0,453	0/1:20,1:21:32.96:33,0,372	0/1:20,0:18:22.65:23,0,53	0/0:18,0:18:19.69:0,20,197	0/1:15,0:13:22.26:22,0,72
chr10	23970899	.	C	CACAT	601.37	PASS	AB=0.866;AC=9;AF=0.167;AN=54;BaseQRankSum=5.524;DP=516;FS=4.690;HRun=0;HaplotypeScore=108.3474;InbreedingCoeff=0.0156;MQ=51.63;MQ0=19;MQRankSum=0.191;QD=3.64;ReadPosRankSum=0.062;VQSLOD=1.7533;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:16:7.24:0,7,54	0/0:8,0:7:17.91:0,18,207	0/0:8,0:3:8.97:0,9,90	./.	0/0:21,0:21:47.95:0,48,554	0/0:22,0:21:26.08:0,26,633	0/0:24,0:24:35.20:0,35,414	0/0:21,0:15:35.97:0,36,285	0/0:15,0:15:17.97:0,18,395	0/1:23,0:21:23.34:23,0,310	0/0:18,0:18:20.41:0,20,169	0/0:15,0:14:38.99:0,39,440	0/0:15,0:15:32:0,32,435	0/0:23,0:23:53.79:0,54,631	0/0:14,0:14:9:0,9,105	0/0:7,0:6:7.75:0,8,52	0/1:12,0:23:27.84:28,0,125	0/1:15,0:14:25.66:26,0,179	0/0:28,0:27:75.18:0,75,566	0/1:23,0:23:46.91:47,0,230	0/1:26,0:23:16.06:16,0,229	0/0:10,0:10:27.04:0,27,391	0/0:17,0:16:38.79:0,39,649	0/0:43,0:42:78.65:0,79,964	0/0:21,0:21:54.02:0,54,736	0/1:12,8:18:71.88:242,0,72	0/1:10,7:19:99:111,0,104	1/1:15,0:14:8.78:249,9,0
chr10	23971048	.	AT	A	1015.97	PASS	AB=0.556;AC=5;AF=0.089;AN=56;BaseQRankSum=8.801;DP=512;FS=6.294;HRun=8;HaplotypeScore=47.7640;InbreedingCoeff=0.7727;MQ=68.96;MQ0=0;MQRankSum=-1.059;QD=20.32;ReadPosRankSum=3.801;VQSLOD=3.4139;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:57.17:0,57,689	0/0:10,0:10:27.08:0,27,326	0/0:10,0:10:30.04:0,30,342	0/0:9,0:9:17.08:0,17,182	0/0:25,0:25:69.20:0,69,822	0/0:24,0:24:72.21:0,72,860	0/0:13,0:13:39.09:0,39,456	0/0:28,0:28:66.17:0,66,768	0/0:13,0:13:36.11:0,36,435	0/0:28,0:28:81.25:0,81,978	0/0:18,0:18:54.17:0,54,652	0/0:18,0:18:54.16:0,54,649	0/0:21,0:21:57.17:0,57,688	0/0:28,0:28:81.20:0,81,932	0/0:24,0:24:66.19:0,66,784	0/0:12,0:12:33.09:0,33,387	0/0:21,0:21:57.17:0,57,688	0/0:23,0:23:51.16:0,51,615	0/0:16,0:16:42.10:0,42,476	0/0:26,0:26:66.20:0,66,797	0/0:11,0:11:24.03:0,24,264	0/0:9,0:9:24.07:0,24,290	0/0:25,0:25:63.17:0,63,738	0/0:8,0:8:21.06:0,21,254	0/0:20,0:20:57.15:0,57,675	0/1:3,12:15:30.42:306,0,30	1/1:1,26:27:63.10:608,63,0	1/1:0,8:8:24.04:232,24,0
chr10	23971856	.	TATATAA	T	1249	PASS	AC=8;AF=0.167;AN=48;BaseQRankSum=7.625;DP=230;FS=1.582;HRun=0;HaplotypeScore=55.7627;InbreedingCoeff=0.7920;MQ=81.06;MQ0=0;MQRankSum=-5.442;QD=28.39;ReadPosRankSum=1.610;VQSLOD=2.7336;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,0:10:10.90:33,11,0	./.	0/0:7,0:7:3.33:0,3,60	0/0:15,0:13:3.67:0,4,98	0/0:6,0:6:18.06:0,18,517	0/0:15,0:15:45.12:0,45,1324	0/0:4,0:4:9.03:0,9,321	0/0:42,0:42:99:0,117,3663	0/0:8,0:8:21.07:0,21,718	0/0:8,0:8:24.08:0,24,802	0/0:7,0:7:21.07:0,21,684	0/0:6,0:6:12.04:0,12,399	0/0:4,0:4:12.04:0,12,343	0/0:8,0:8:24.08:0,24,848	0/0:5,0:5:15.04:0,15,370	0/0:4,0:4:9.03:0,9,321	0/0:11,0:11:33.11:0,33,1046	0/0:8,0:8:21.07:0,21,671	0/0:11,0:11:33.11:0,33,969	0/0:4,0:4:12.03:0,12,346	./.	./.	0/0:3,0:3:9.03:0,9,291	./.	0/0:6,0:6:15.05:0,15,481	1/1:2,12:14:33.07:669,33,0	1/1:4,12:16:24.08:550,24,0	1/1:1,3:4:6.02:141,6,0
chr10	23971858	.	TATAA	T	776.20	PASS	AC=8;AF=0.167;AN=48;BaseQRankSum=7.816;DP=224;FS=0.745;HRun=0;HaplotypeScore=47.5856;InbreedingCoeff=0.8063;MQ=79.98;MQ0=0;MQRankSum=-5.894;QD=18.93;ReadPosRankSum=1.872;VQSLOD=2.7089;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,12:12:18.06:341,18,0	./.	0/0:7,0:6:4.03:0,4,72	0/0:16,0:13:4.34:0,4,71	0/0:6,0:6:18.04:0,18,366	0/0:16,0:16:42.14:0,42,1020	0/0:3,0:3:9.03:0,9,243	0/0:42,0:42:99:0,117,2674	0/0:7,0:7:21.07:0,21,535	0/0:9,0:9:27.08:0,27,623	0/0:7,0:7:21.07:0,21,506	0/0:6,0:6:15.04:0,15,346	0/0:4,0:4:12.03:0,12,263	0/0:8,0:8:24.08:0,24,641	0/0:6,0:6:15.04:0,15,319	0/0:3,0:3:9.03:0,9,243	0/0:11,0:11:33.09:0,33,763	0/0:7,0:7:21.04:0,21,497	0/0:11,0:11:33.10:0,33,735	0/0:4,0:4:9.03:0,9,243	./.	./.	0/0:3,0:3:9.03:0,9,214	./.	0/0:5,0:5:15.04:0,15,347	1/1:13,0:13:29.96:281,30,0	1/1:13,0:12:24.02:237,24,0	1/1:3,0:3:6.01:63,6,0
chr10	23972642	.	G	GA	10109.36	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=-14.460;DP=673;FS=5.803;HRun=9;HaplotypeScore=82.9837;InbreedingCoeff=0.9787;MQ=74.02;MQ0=0;MQRankSum=-1.342;QD=24.66;ReadPosRankSum=-0.752;VQSLOD=5.1103;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:35.98:0,36,312	1/1:2,10:12:21.06:232,21,0	0/0:15,0:16:38.92:0,39,248	0/0:7,0:7:15.73:0,16,114	1/1:3,30:34:87.12:922,87,0	1/1:3,30:33:78.21:863,78,0	1/1:5,15:20:39.11:431,39,0	1/1:10,33:44:99:1065,101,0	1/1:1,18:19:48.13:531,48,0	0/0:36,1:37:65.77:0,66,799	0/0:22,1:23:26.60:0,27,448	1/1:4,19:23:60.14:654,60,0	1/1:3,36:39:90.24:995,90,0	1/1:1,21:22:51.14:564,51,0	0/0:36,0:36:98.95:0,99,852	0/0:32,0:34:94.03:0,94,789	0/0:13,0:13:32.99:0,33,286	0/0:13,0:13:32.99:0,33,286	0/0:19,1:20:16.81:0,17,356	0/0:32,0:32:95.93:0,96,821	0/0:16,0:16:41.98:0,42,365	1/1:3,22:25:63.16:687,63,0	1/1:5,29:36:63.69:879,64,0	1/1:2,16:18:42.11:465,42,0	1/1:4,12:16:7.03:306,7,0	1/1:6,16:22:11.32:507,11,0	1/1:6,25:33:62.73:642,63,0	1/1:1,13:14:33.09:365,33,0
chr10	23974548	.	TATATTAATTGC	T	6329.67	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=13.018;DP=509;FS=0.000;HRun=0;HaplotypeScore=159.8156;InbreedingCoeff=0.8958;MQ=63.97;MQ0=0;MQRankSum=-7.516;QD=57.54;ReadPosRankSum=-0.794;VQSLOD=4.5001;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:39.13:0,39,1886	0/0:13,0:13:39.13:0,39,2002	0/0:4,0:4:12.04:0,12,644	0/0:6,0:6:18.06:0,18,704	0/0:47,0:47:99:0,138,6867	0/0:17,0:17:51.18:0,51,2797	0/0:5,0:5:15.05:0,15,772	0/0:23,0:23:60.21:0,60,2903	0/0:22,0:22:63.21:0,63,3356	1/1:2,18:20:54.19:1717,54,0	1/1:6,27:33:57.20:1824,57,0	0/0:10,0:10:27.09:0,27,1434	0/0:26,0:26:75.26:0,75,4145	0/0:21,0:21:63.22:0,63,3434	0/0:22,0:22:66.21:0,66,3386	0/0:21,0:21:60.21:0,60,2852	1/1:2,3:5:3.01:51,3,0	1/1:0,8:8:2.80:105,3,0	1/1:3,4:7:12.04:317,12,0	1/1:3,26:29:75.26:2209,75,0	1/1:4,4:8:5.94:107,6,0	0/0:12,0:12:36.12:0,36,1908	0/0:30,0:30:87.30:0,87,4738	0/0:9,0:9:27.09:0,27,1294	0/0:30,0:30:87.30:0,87,4558	0/0:26,0:26:75.21:0,75,3603	0/0:31,0:31:87.30:0,87,4324	0/0:10,0:10:27.56:0,28,1030
chr10	23975615	.	TCACACACA	T	4014.63	PASS	AB=0.813;AC=19;AF=0.339;AN=56;BaseQRankSum=5.123;DP=572;FS=11.901;HRun=0;HaplotypeScore=147.2411;InbreedingCoeff=0.2541;MQ=63.67;MQ0=4;MQRankSum=-6.894;QD=13.34;ReadPosRankSum=-0.720;VQSLOD=1.7726;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:29:12.29:12,0,101	1/1:5,3:9:0.07:302,0,0	0/0:22,0:16:8.86:0,9,76	0/0:18,0:17:8.94:0,9,65	0/1:19,0:22:72.69:211,0,73	0/1:8,7:15:14.95:107,0,15	1/1:9,6:15:12.02:249,12,0	0/1:37,0:37:18.17:27,0,18	0/1:9,14:23:2.92:546,0,3	0/0:21,0:21:39.05:0,39,1019	0/0:13,0:14:24.05:0,24,537	1/1:11,13:25:24.96:721,25,0	1/1:8,14:23:24.08:548,24,0	1/1:15,8:23:17.27:383,17,0	0/0:12,0:33:32.70:0,33,1009	0/0:14,0:28:50.99:0,51,1567	0/0:15,0:15:23.60:0,24,732	0/0:12,0:13:17.96:0,18,309	0/0:12,0:11:18.05:0,18,465	0/0:13,0:14:24.03:0,24,596	0/0:21,0:20:39.11:0,39,1129	0/1:13,2:14:16.26:194,0,16	0/1:10,8:20:24.77:356,0,25	0/1:12,8:20:18.01:227,0,18	0/1:24,1:25:46.73:131,0,47	0/0:17,0:17:36.57:0,37,1027	0/0:11,0:30:29.81:0,30,876	0/0:7,0:13:20.10:0,20,558
chr10	23976228	.	ATCAC	A	3708.38	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=11.328;DP=676;FS=0.990;HRun=0;HaplotypeScore=106.7306;InbreedingCoeff=0.9976;MQ=87.84;MQ0=0;MQRankSum=-3.488;QD=47.54;ReadPosRankSum=2.432;VQSLOD=4.5836;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,144,3935	0/0:13,0:13:39.13:0,39,1090	0/0:24,0:24:59.35:0,59,1569	0/0:23,0:23:66.19:0,66,1660	0/0:21,0:21:63.20:0,63,1699	0/0:34,0:34:99:0,99,2497	0/0:23,0:23:69.24:0,69,1908	0/0:28,0:28:81.23:0,81,1932	0/0:19,0:19:57.14:0,57,1414	0/0:26,0:26:78.25:0,78,2067	0/0:8,0:8:24.08:0,24,671	0/0:28,0:28:84.25:0,84,2171	0/0:29,0:29:87.28:0,87,2300	0/0:20,0:20:60.21:0,60,1677	0/0:26,0:26:78.25:0,78,2113	0/0:22,0:22:60.18:0,60,1552	0/0:30,0:30:90.24:0,90,2335	0/0:12,0:12:33.08:0,33,857	0/0:23,0:23:66.18:0,66,1604	0/0:19,0:19:57.18:0,57,1495	0/0:34,0:34:99:0,102,2678	0/0:21,0:21:63.22:0,63,1725	0/0:11,0:11:33.10:0,33,809	0/0:33,0:33:99:0,99,2528	0/0:22,0:22:63.19:0,63,1643	1/1:2,27:29:75.20:1357,75,0	1/1:0,39:39:99:1953,99,0	1/1:2,8:10:21.07:399,21,0
chr10	23977697	.	G	GA	701.44	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-7.402;DP=549;FS=5.413;HRun=8;HaplotypeScore=63.9882;InbreedingCoeff=0.9693;MQ=74.28;MQ0=0;MQRankSum=-0.645;QD=26.98;ReadPosRankSum=2.506;VQSLOD=4.5618;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,24:26:69.21:796,69,0	0/0:8,0:8:21.01:0,21,192	0/0:12,0:12:30.02:0,30,274	0/0:7,0:7:14.87:0,15,122	0/0:32,0:32:93.05:0,93,851	0/0:23,0:23:66.04:0,66,604	0/0:13,0:13:36.02:0,36,329	0/0:32,0:33:68.05:0,68,607	0/0:20,0:20:54.02:0,54,494	0/0:31,0:31:84.02:0,84,767	0/0:21,0:21:63.03:0,63,576	0/0:22,0:22:60.02:0,60,549	0/0:20,0:20:57.02:0,57,517	0/0:19,0:19:54.03:0,54,494	0/0:18,0:18:54.03:0,54,494	0/0:22,0:22:60.03:0,60,549	0/0:18,0:18:48.02:0,48,439	0/0:10,0:10:21.01:0,21,192	0/0:10,0:10:27:0,27,243	0/0:31,0:31:81:0,81,731	0/0:14,0:14:33.01:0,33,302	0/0:23,0:23:60.01:0,60,545	0/0:23,0:23:69.02:0,69,627	0/0:11,0:10:27.01:0,27,247	0/0:22,0:22:54.02:0,54,494	0/0:18,0:18:54.03:0,54,494	0/0:34,0:34:93.05:0,93,851	0/0:8,0:8:21.01:0,21,192
chr10	23978870	.	CT	C	4246.34	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=14.794;DP=417;FS=9.537;HRun=8;HaplotypeScore=59.5679;InbreedingCoeff=0.9535;MQ=65.22;MQ0=1;MQRankSum=-0.698;QD=25.74;ReadPosRankSum=2.063;VQSLOD=5.4384;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:8:24.07:0,24,290	0/0:7,0:7:15.05:0,15,181	0/0:9,0:8:12.39:0,12,106	0/0:3,0:1:2.98:0,3,22	0/0:25,0:25:63.19:0,63,761	0/0:16,0:16:42.13:0,42,507	0/0:9,0:9:27.08:0,27,326	0/0:30,0:30:75.23:0,75,905	0/0:14,0:14:36.11:0,36,435	1/1:1,17:17:48.08:463,48,0	1/1:2,22:24:63.09:606,63,0	0/0:8,0:8:24.07:0,24,290	0/0:26,0:26:75.23:0,75,904	0/0:10,0:10:27.08:0,27,326	0/0:22,0:22:60.18:0,60,725	0/0:17,0:17:48.15:0,48,580	1/1:2,9:11:27.04:261,27,0	1/1:1,7:8:18.03:174,18,0	1/1:0,18:18:54.07:516,54,0	1/1:3,17:20:51.07:492,51,0	1/1:0,5:5:15.02:145,15,0	0/0:3,0:3:9.03:0,9,109	0/0:18,0:18:51.16:0,51,616	0/0:6,0:6:18.06:0,18,217	0/0:21,0:21:57.15:0,57,675	1/1:0,19:19:57.09:550,57,0	1/1:2,20:22:53.82:503,54,0	1/1:3,17:20:57.05:536,57,0
chr10	23979133	.	T	TTGTC	1045.25	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=4.436;DP=655;FS=0.822;HRun=0;HaplotypeScore=131.7737;InbreedingCoeff=0.9008;MQ=72.90;MQ0=6;MQRankSum=-3.815;QD=20.90;ReadPosRankSum=-0.300;VQSLOD=3.3793;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:31:62.91:0,63,966	0/0:11,0:11:21.04:0,21,322	0/0:37,0:32:48.68:0,49,788	0/0:38,0:31:49.89:0,50,703	0/0:26,0:26:66.23:0,66,1090	0/0:27,0:27:66.23:0,66,1089	0/0:20,0:20:45.15:0,45,737	0/0:46,0:46:81.26:0,81,1263	0/0:20,0:20:54.18:0,54,881	0/0:22,0:22:39.10:0,39,587	0/0:20,0:19:39.05:0,39,647	0/0:27,0:27:45.11:0,45,673	0/0:30,0:30:69.22:0,69,1105	0/0:24,0:24:42.14:0,42,692	0/0:31,0:31:66.21:0,66,1069	0/0:27,0:27:57.15:0,57,883	0/0:23,0:23:3.01:0,3,39	0/0:12,0:12:36.04:0,36,562	0/0:20,0:20:30.10:0,30,492	0/0:15,0:15:36.04:0,36,563	0/0:19,0:19:38.89:0,39,557	0/0:10,0:10:24:0,24,288	0/0:13,0:13:33.11:0,33,542	0/0:36,0:35:84.24:0,84,1319	0/0:19,0:19:21.13:0,21,488	1/1:19,3:22:41.75:838,42,0	1/1:15,9:22:10.75:135,11,0	1/1:4,0:4:9.03:204,9,0
chr10	23979155	.	GTGTGTGTC	G	2534.81	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=1.673;DP=664;FS=7.807;HRun=0;HaplotypeScore=161.8115;InbreedingCoeff=0.9718;MQ=56.34;MQ0=16;MQRankSum=-5.511;QD=16.04;ReadPosRankSum=0.336;VQSLOD=2.3924;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:36:62.78:0,63,1108	0/0:8,0:8:14.93:0,15,235	0/0:51,0:24:31.74:0,32,308	0/0:58,0:25:56.73:0,57,508	0/0:26,0:26:65.98:0,66,875	0/0:30,0:29:70.90:0,71,1451	0/0:21,0:21:47.93:0,48,584	0/0:43,0:43:99:0,105,981	0/0:23,0:22:57.05:0,57,845	1/1:16,0:15:41.74:340,42,0	1/1:18,0:17:25.79:306,26,0	0/0:25,0:25:52.40:0,52,802	0/0:26,0:25:59.98:0,60,876	0/0:18,0:18:35.96:0,36,422	0/0:30,0:30:84.19:0,84,2358	0/0:27,0:27:63.41:0,63,1475	1/1:2,26:28:5.80:98,6,0	1/1:13,1:14:34.79:433,35,0	1/1:12,0:12:32.97:314,33,0	1/1:15,0:15:32.88:265,33,0	1/1:19,0:18:23.53:196,24,0	0/0:10,0:10:14.89:0,15,319	0/0:14,0:14:27.03:0,27,470	0/0:40,0:39:74.09:0,74,1388	0/0:18,0:18:41.95:0,42,688	1/1:17,0:17:46.32:426,46,0	1/1:14,0:14:17.23:256,17,0	1/1:5,0:5:11.93:119,12,0
chr10	23979163	.	CTG	C	2073.83	PASS	AB=0.840;AC=31;AF=0.596;AN=52;BaseQRankSum=0.816;DP=685;FS=0.691;HRun=0;HaplotypeScore=106.6473;InbreedingCoeff=0.3445;MQ=52.98;MQ0=27;MQRankSum=1.460;QD=4.86;ReadPosRankSum=1.985;VQSLOD=2.3816;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:43:12.91:0,13,144	1/1:5,2:7:3.01:33,3,0	./.	./.	1/1:18,6:24:11.95:117,12,0	0/1:28,5:33:39.19:241,0,39	1/1:15,2:21:6.70:76,7,0	1/1:40,0:37:2.35:19,2,0	1/1:22,6:27:30:281,30,0	0/0:20,0:19:13.26:0,13,92	0/0:17,0:16:2.90:0,3,16	1/1:16,10:26:18.52:197,19,0	1/1:17,9:26:18.35:178,18,0	1/1:11,2:17:17.61:141,18,0	0/1:29,2:31:71.20:71,0,552	0/0:25,0:26:15.97:0,16,342	1/1:30,0:29:2.66:13,3,0	0/1:20,0:18:8.25:8,0,12	0/0:13,0:12:3.85:0,4,22	0/0:17,0:17:2.98:0,3,22	0/0:19,0:17:5.99:0,6,48	0/1:7,4:11:18.20:27,0,18	1/1:8,4:12:6.02:65,6,0	1/1:19,22:41:38.92:405,39,0	0/1:11,10:21:29.80:108,0,30	1/1:19,0:20:17.91:157,18,0	1/1:9,0:14:5.61:104,6,0	0/0:3,0:5:1.10:0,1,4
chr10	23980558	.	AAC	A	4943.60	PASS	AB=0.854;AC=27;AF=0.482;AN=56;BaseQRankSum=-2.477;DP=697;FS=14.174;HRun=0;HaplotypeScore=107.2917;InbreedingCoeff=0.6125;MQ=63.24;MQ0=5;MQRankSum=2.636;QD=11.39;ReadPosRankSum=2.949;VQSLOD=3.6688;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:14,25:39:17.09:584,17,0	1/1:4,10:14:24.07:271,24,0	0/1:33,1:19:24.97:25,0,54	0/0:28,0:14:6.02:0,6,85	0/1:15,5:23:13.32:268,0,13	1/1:10,15:26:32.76:334,33,0	1/1:8,13:22:5.70:241,6,0	0/1:33,0:33:33.81:34,0,294	0/1:9,17:26:22.31:403,0,22	0/0:18,0:22:25.27:0,25,216	0/0:25,0:26:6.28:0,6,76	1/1:13,13:31:38.27:342,38,0	1/1:13,26:44:64.96:625,65,0	1/1:8,16:25:29.62:300,30,0	0/1:7,1:19:1.03:1,0,267	0/0:17,0:30:60.04:0,60,638	0/0:11,0:31:20.82:0,21,183	0/0:5,0:10:8.95:0,9,74	0/0:14,0:17:23.33:0,23,171	0/0:6,0:10:8.74:0,9,64	0/0:31,0:31:16.19:0,16,128	1/1:6,10:16:27.08:307,27,0	1/1:8,10:18:20.89:218,21,0	1/1:14,18:33:38.61:402,39,0	1/1:10,17:29:57.86:589,58,0	0/0:6,0:23:45.04:0,45,456	0/0:9,0:20:29.93:0,30,252	0/0:6,0:10:24.02:0,24,251
chr10	23980893	.	G	GA	4454.74	PASS	AB=0.588;AC=19;AF=0.339;AN=56;BaseQRankSum=6.608;DP=422;FS=0.814;HRun=8;HaplotypeScore=45.5797;InbreedingCoeff=0.8990;MQ=68.37;MQ0=0;MQRankSum=-0.745;QD=29.12;ReadPosRankSum=1.414;VQSLOD=5.0091;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:30.01:0,30,275	0/0:11,0:11:27.01:0,27,247	0/0:10,0:8:16.55:0,17,124	0/0:6,0:6:5.84:0,6,42	0/0:32,1:33:58.43:0,58,785	0/0:22,0:22:63.03:0,63,576	0/0:12,0:12:33.02:0,33,302	0/0:27,0:27:75.02:0,75,683	0/0:16,0:16:48.01:0,48,434	1/1:1,12:13:39.12:450,39,0	1/1:3,20:23:54.12:608,54,0	0/0:12,0:12:33.02:0,33,302	0/0:21,0:21:60.03:0,60,549	0/0:14,0:14:36.01:0,36,329	0/0:16,0:15:48.03:0,48,439	0/0:11,0:11:33.02:0,33,302	0/1:3,7:10:12.42:123,0,12	1/1:2,10:12:27.08:312,27,0	1/1:1,13:14:39.08:429,39,0	1/1:2,16:18:48.14:554,48,0	1/1:0,5:5:15.04:173,15,0	0/0:8,0:8:21:0,21,192	0/0:15,0:15:42.02:0,42,384	0/0:4,0:4:12.01:0,12,110	0/0:19,0:19:54.03:0,54,494	1/1:3,18:21:57.13:629,57,0	1/1:0,15:15:45.13:519,45,0	1/1:0,22:22:57.17:657,57,0
chr10	23983499	.	G	GAAA	5164.98	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-3.625;DP=556;FS=2.377;HRun=10;HaplotypeScore=84.3678;InbreedingCoeff=0.9849;MQ=65.81;MQ0=1;MQRankSum=-1.025;QD=35.62;ReadPosRankSum=-1.610;VQSLOD=4.3885;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:68.91:0,69,809	0/0:14,0:15:32.98:0,33,381	0/0:14,0:13:11.43:0,11,135	0/0:10,0:9:20.98:0,21,227	0/0:21,0:22:38.43:0,38,603	0/0:20,0:20:48.08:0,48,570	0/0:18,0:19:52.49:0,52,629	0/0:26,0:26:63.09:0,63,743	0/0:17,0:17:48.14:0,48,584	1/1:7,14:23:48.10:801,48,0	1/1:3,16:21:54.55:893,55,0	0/0:25,0:25:66.14:0,66,790	0/0:20,0:20:54.12:0,54,656	0/0:20,0:24:55.27:0,55,634	0/0:26,0:26:66.15:0,66,803	0/0:19,0:19:54.12:0,54,643	1/1:1,26:31:57.18:1049,57,0	1/1:2,14:20:31.37:764,31,0	1/1:5,13:20:48.09:776,48,0	1/1:7,10:19:34.19:472,34,0	1/1:3,6:10:24.54:410,25,0	0/0:15,0:15:33.06:0,33,401	0/0:24,0:25:66.05:0,66,772	0/0:6,0:6:15.02:0,15,182	0/0:19,0:20:40.46:0,40,673	0/0:25,0:25:60.15:0,60,730	0/0:26,0:26:60.04:0,60,693	0/0:7,0:8:12.96:0,13,243
chr10	23984896	.	G	GGC	15508.42	PASS	AB=0.944;AC=54;AF=0.964;AN=56;BaseQRankSum=2.805;DP=346;FS=0.000;HRun=0;HaplotypeScore=211.1921;InbreedingCoeff=-0.0286;MQ=39.40;MQ0=1;MQRankSum=-0.946;QD=44.82;ReadPosRankSum=2.516;VQSLOD=4.4872;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,12:13:36.12:587,36,0	1/1:0,5:5:15.05:270,15,0	0/1:5,0:4:16.81:17,0,17	0/1:7,1:6:25.42:46,0,25	1/1:0,16:17:42.14:672,42,0	1/1:0,12:13:39.13:669,39,0	1/1:1,11:12:36.05:570,36,0	1/1:2,13:15:39.13:691,39,0	1/1:2,10:12:33.07:544,33,0	1/1:0,12:13:39.13:671,39,0	1/1:1,12:13:30.57:526,31,0	1/1:0,14:14:42.01:656,42,0	1/1:1,11:13:36.12:636,36,0	1/1:0,17:19:54.12:898,54,0	1/1:0,23:23:69.24:1228,69,0	1/1:0,22:22:66.09:1113,66,0	1/1:1,15:17:48.15:825,48,0	1/1:1,4:5:15.05:254,15,0	1/1:0,10:10:29.46:493,29,0	1/1:0,12:12:33.11:586,33,0	1/1:3,3:5:8.75:137,9,0	1/1:0,16:16:45.08:731,45,0	1/1:1,16:17:45.04:701,45,0	1/1:0,6:6:11.96:179,12,0	1/1:1,6:7:21.05:345,21,0	1/1:1,10:11:30.10:528,30,0	1/1:3,16:19:51.15:828,51,0	1/1:0,2:2:6.02:108,6,0
chr10	23990226	.	AAT	A	4306.89	PASS	AC=18;AF=0.346;AN=52;BaseQRankSum=9.763;DP=293;FS=2.927;HRun=0;HaplotypeScore=44.1060;InbreedingCoeff=0.8695;MQ=65.27;MQ0=2;MQRankSum=0.281;QD=32.14;ReadPosRankSum=3.120;VQSLOD=6.4494;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:14:24.01:0,24,213	0/0:4,0:4:12.04:0,12,201	0/0:4,0:3:2.17:0,2,49	0/0:7,0:4:8.07:0,8,70	0/0:12,0:12:30.10:0,30,502	0/0:13,0:13:26.68:0,27,412	0/0:6,0:6:12.02:0,12,173	0/0:35,0:35:72.23:0,72,1152	0/0:8,0:8:18.06:0,18,292	1/1:1,10:11:30.10:382,30,0	1/1:2,13:15:39.08:478,39,0	0/0:6,0:6:15.05:0,15,251	0/0:4,0:4:9.03:0,9,148	0/0:5,0:5:6.02:0,6,100	0/0:9,0:9:24.07:0,24,376	0/0:6,0:6:18.06:0,18,294	1/1:1,16:17:6.07:566,6,0	1/1:5,12:17:36.12:458,36,0	1/1:2,14:16:42.13:533,42,0	1/1:0,10:10:30.05:364,30,0	./.	./.	0/0:6,0:6:15.05:0,15,246	0/0:1,0:1:2.99:0,3,24	0/0:18,0:18:42.14:0,42,703	1/1:3,13:16:39.12:494,39,0	1/1:3,20:23:54.17:688,54,0	1/1:0,9:9:27.09:344,27,0
chr10	23991012	.	T	TG	9821.14	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-17.541;DP=870;FS=0.592;HRun=0;HaplotypeScore=82.7159;InbreedingCoeff=0.9994;MQ=86.86;MQ0=0;MQRankSum=-6.891;QD=44.04;ReadPosRankSum=4.543;VQSLOD=5.0855;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:62,0:61:99:0,187,2577	0/0:9,0:9:27.08:0,27,361	0/0:32,0:32:90.27:0,90,1212	0/0:28,0:28:72.20:0,72,960	0/0:19,0:19:54.18:0,54,754	0/0:18,0:18:54.18:0,54,755	0/0:32,0:32:96.31:0,96,1324	0/0:33,0:32:96.30:0,96,1303	0/0:30,0:30:87.29:0,87,1214	1/1:0,29:29:84.26:1294,84,0	1/1:0,15:15:42.14:671,42,0	0/0:40,0:40:99:0,120,1677	0/0:46,0:46:99:0,135,1884	0/0:38,0:38:99:0,111,1504	0/0:45,0:44:99:0,135,1870	0/0:37,0:37:99:0,111,1533	1/1:0,37:37:96.33:1535,96,0	1/1:0,31:31:90.31:1439,90,0	1/1:1,22:23:69.24:1093,69,0	1/1:0,23:23:66.23:1055,66,0	1/1:0,65:65:99:2734,172,0	0/0:23,0:23:69.22:0,69,943	0/0:21,0:21:63.21:0,63,881	0/0:48,0:48:99:0,141,1954	0/0:20,0:20:60.20:0,60,833	0/0:28,0:28:78.24:0,78,1061	0/0:30,0:30:90.30:0,90,1258	0/0:8,0:8:24.08:0,24,336
chr10	23992395	.	G	GTTTTT	8068.55	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-0.714;DP=534;FS=15.765;HRun=8;HaplotypeScore=98.3552;InbreedingCoeff=0.9433;MQ=72.78;MQ0=0;MQRankSum=-4.393;QD=44.09;ReadPosRankSum=-1.233;VQSLOD=1.6070;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:51.15:0,51,843	0/0:5,0:5:12.02:0,12,199	0/0:11,0:11:1.19:0,1,319	0/0:11,0:11:26.32:0,26,381	0/0:37,0:37:96.24:0,96,1579	0/0:24,0:24:63.17:0,63,1052	0/0:11,0:11:27.05:0,27,436	0/0:41,0:41:99:0,99,1644	0/0:16,0:16:48.16:0,48,818	1/1:7,11:21:45.13:1152,45,0	1/1:8,12:24:57.19:1409,57,0	0/0:26,0:26:72.23:0,72,1231	0/0:30,0:30:81.22:0,81,1334	0/0:16,0:16:45.15:0,45,771	0/0:19,0:19:54.16:0,54,925	0/0:20,0:20:48.12:0,48,822	1/1:8,13:22:42.14:1142,42,0	1/1:1,12:16:33.11:937,33,0	1/1:4,10:15:33.11:922,33,0	1/1:10,10:23:39.13:1014,39,0	1/1:3,1:5:6.02:138,6,0	0/0:9,0:9:24.07:0,24,411	0/0:18,0:18:51.17:0,51,873	0/0:12,0:12:33.10:0,33,549	0/0:27,0:27:63.16:0,63,1079	1/1:6,0:28:66.16:693,66,0	1/1:2,0:23:53.47:526,53,0	1/1:0,0:5:14.71:137,15,0
chr10	23992748	.	T	TAAGGAAAAGAG	66006.85	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-2.121;DP=707;FS=3.308;HRun=0;HaplotypeScore=191.0259;InbreedingCoeff=0.9677;MQ=72.64;MQ0=0;MQRankSum=-13.547;QD=107.50;ReadPosRankSum=2.873;VQSLOD=5.2935;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:11,6:20:41.50:1774,42,0	1/1:4,7:13:27.09:1177,27,0	0/0:21,0:22:47.19:0,47,1417	0/0:25,0:25:57.18:0,57,1637	1/1:10,26:44:99:4631,102,0	1/1:9,31:41:90.31:4750,90,0	1/1:7,14:24:51.18:2706,51,0	1/1:23,14:42:99:4780,117,0	1/1:11,7:20:39.13:1691,39,0	1/1:13,17:31:75.15:3575,75,0	1/1:3,18:22:54.19:3063,54,0	1/1:12,21:39:90.31:4958,90,0	1/1:7,11:22:45.15:2407,45,0	1/1:12,18:33:87.30:4253,87,0	0/0:26,0:26:75.26:0,75,2479	0/0:20,0:20:60.18:0,60,1817	1/1:8,7:16:30.10:1549,30,0	1/1:5,6:12:21.07:987,21,0	1/1:6,10:18:54.13:2429,54,0	1/1:10,17:30:54.18:2801,54,0	1/1:5,4:9:18.02:761,18,0	1/1:7,16:36:60.21:2847,60,0	1/1:8,17:27:62.99:3194,63,0	1/1:8,13:23:45.15:2190,45,0	1/1:4,12:21:33.11:1741,33,0	1/1:10,13:27:75.21:3417,75,0	1/1:10,24:39:78.27:4063,78,0	1/1:1,3:4:6.02:265,6,0
chr10	23993622	.	C	CT	5768.83	PASS	AB=0.923;AC=19;AF=0.339;AN=56;BaseQRankSum=-0.956;DP=625;FS=2.846;HRun=8;HaplotypeScore=63.1900;InbreedingCoeff=0.9530;MQ=76.95;MQ0=0;MQRankSum=-3.581;QD=25.99;ReadPosRankSum=-0.999;VQSLOD=5.3174;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:36.02:0,36,329	0/0:5,0:5:15.01:0,15,137	0/0:25,0:25:51.01:0,51,465	0/0:5,0:5:15.01:0,15,137	0/0:31,0:31:84.03:0,84,764	0/0:24,0:24:66.04:0,66,604	0/0:12,0:12:33.01:0,33,302	0/0:41,0:41:89.96:0,90,804	0/0:27,0:27:78.03:0,78,709	1/1:3,29:32:84.24:961,84,0	1/1:5,20:27:35.63:601,36,0	1/1:0,20:20:60.18:692,60,0	0/0:22,0:23:65:0,65,569	1/1:5,23:28:63.19:727,63,0	0/0:28,0:28:84.05:0,84,768	0/0:21,0:21:54.01:0,54,494	1/1:1,11:12:33.10:381,33,0	1/1:1,18:20:57.17:657,57,0	1/1:1,16:17:48.11:532,48,0	1/1:5,29:34:87.18:975,87,0	1/1:1,7:8:21.06:242,21,0	0/0:21,0:21:63.03:0,63,577	0/0:26,0:26:69.02:0,69,631	0/0:11,0:11:33.02:0,33,302	0/0:29,0:29:87.05:0,87,796	0/1:22,2:24:0.21:0,0,504	0/0:44,0:44:99:0,120,1093	0/0:15,0:15:36.02:0,36,329
chr10	23994380	.	AACT	A	61.82	PASS	AB=1.000;AC=10;AF=0.179;AN=56;BaseQRankSum=6.277;DP=458;FS=9.671;HRun=0;HaplotypeScore=140.4324;InbreedingCoeff=0.3208;MQ=61.82;MQ0=2;MQRankSum=-5.430;QD=0.55;ReadPosRankSum=-6.108;VQSLOD=-0.6498;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:5,0:5:2.99:24,3,0	0/0:8,0:8:8.05:0,8,70	1/1:24,0:16:2.79:25,3,0	0/0:14,0:12:11.17:0,11,137	0/0:39,0:39:36.20:0,36,307	0/1:25,0:25:1.67:2,0,124	0/0:10,0:10:12.35:0,12,98	0/0:31,0:31:41.58:0,42,313	0/1:18,0:18:16.29:16,0,84	0/0:22,0:22:44.80:0,45,465	0/0:17,0:17:17.80:0,18,177	0/1:19,0:19:5.77:6,0,89	0/0:27,0:27:20.96:0,21,249	0/0:21,0:21:8.50:0,9,134	1/1:3,6:9:6.02:83,6,0	0/1:12,0:12:34.95:35,0,60	0/0:9,0:9:2.94:0,3,18	0/0:5,0:5:8.87:0,9,57	0/0:22,0:22:50.79:0,51,535	0/0:15,0:15:14.84:0,15,134	0/0:5,0:5:0.01:0,0,0	0/0:9,0:9:8.90:0,9,66	0/0:13,0:13:9.36:0,9,148	0/0:6,0:6:5.98:0,6,47	0/0:28,0:28:17.96:0,18,258	0/0:15,0:15:20.98:0,21,208	0/0:23,0:23:47.62:0,48,445	0/0:6,0:6:12.04:0,12,172
chr10	23994409	.	CTAATAA	C	4605.66	PASS	AB=1.000;AC=30;AF=0.556;AN=54;BaseQRankSum=-0.364;DP=360;FS=1.334;HRun=0;HaplotypeScore=148.1142;InbreedingCoeff=0.4959;MQ=46.33;MQ0=2;MQRankSum=-1.696;QD=17.85;ReadPosRankSum=0.399;VQSLOD=4.5333;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:6:7.25:0,7,86	1/1:3,4:7:6.02:107,6,0	./.	0/0:10,0:7:3.01:0,3,44	1/1:17,12:29:30.10:509,30,0	1/1:10,8:18:33.11:642,33,0	1/1:5,4:9:12.04:185,12,0	1/1:19,0:27:6.46:60,6,0	1/1:5,10:16:18.53:357,19,0	0/1:17,0:17:51.66:52,0,203	0/1:17,0:17:30.72:31,0,177	1/1:8,10:18:36.12:694,36,0	1/1:19,5:24:35.24:640,35,0	1/1:11,4:15:18.06:347,18,0	0/0:9,0:9:15.05:0,15,245	0/0:7,0:7:15.05:0,15,369	0/1:6,0:6:13.92:34,0,14	0/0:5,0:5:1.55:0,2,4	0/0:17,0:17:24.07:0,24,344	0/0:9,0:9:6.02:0,6,90	0/0:4,0:4:0.89:0,1,2	1/1:6,0:6:3.01:48,3,0	1/1:9,2:11:9.03:173,9,0	1/1:4,1:5:3.01:47,3,0	1/1:14,9:23:30.10:586,30,0	0/1:10,0:10:93.52:94,0,106	0/0:21,0:21:37.64:0,38,490	0/0:9,0:9:21.10:0,21,291
chr10	23994411	.	A	ACT	239.61	PASS	AB=0.960;AC=12;AF=0.214;AN=56;BaseQRankSum=-3.353;DP=353;FS=4.378;HRun=0;HaplotypeScore=137.3917;InbreedingCoeff=-0.2195;MQ=46.11;MQ0=2;MQRankSum=6.502;QD=1.56;ReadPosRankSum=-5.041;VQSLOD=0.5465;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:6,0:6:10.68:11,0,117	0/0:7,0:7:6.39:0,6,41	0/0:4,0:2:3:0,3,25	0/0:9,0:6:18.06:0,18,254	0/0:28,0:28:34.66:0,35,189	0/0:18,0:18:27.73:0,28,105	0/1:8,0:8:9.26:9,0,35	0/1:26,0:26:16.69:17,0,254	0/1:16,0:16:1.99:2,0,53	0/0:16,0:16:16.54:0,17,130	0/0:17,0:17:23.05:0,23,112	0/0:18,0:18:9.32:0,9,86	0/0:24,0:24:3.50:0,4,99	0/0:14,0:14:16.63:0,17,66	0/0:9,0:9:15.04:0,15,188	0/0:6,0:6:18.06:0,18,280	0/0:5,0:5:7.19:0,7,45	0/1:6,0:6:9.24:9,0,29	0/1:15,2:17:93.80:94,0,119	0/0:9,0:9:6.67:0,7,37	0/0:4,0:4:0.16:0,0,0	0/1:7,0:7:1.59:2,0,10	0/0:11,0:11:3.79:0,4,27	0/1:5,0:5:6.59:17,0,7	0/1:23,0:23:28.16:28,0,61	0/1:10,0:10:30.03:30,0,62	0/1:18,3:21:91.16:91,0,134	0/1:6,3:9:64.48:64,0,83
chr10	23994412	.	A	ACTACTAC	3615.82	PASS	AB=0.975;AC=23;AF=0.411;AN=56;BaseQRankSum=-3.647;DP=349;FS=5.645;HRun=0;HaplotypeScore=156.8569;InbreedingCoeff=-0.4009;MQ=45.68;MQ0=2;MQRankSum=1.601;QD=11.78;ReadPosRankSum=-5.345;VQSLOD=0.4929;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:6:6.18:0,6,121	0/1:7,0:7:5.15:5,0,81	0/0:4,0:2:3.01:0,3,41	0/0:8,0:5:15.04:0,15,297	0/1:28,0:28:99:241,0,103	0/1:19,0:19:99:177,0,208	0/1:7,0:7:30.16:30,0,33	0/1:25,0:25:99:198,0,194	0/1:16,0:16:59.23:59,0,171	0/1:16,0:16:23.21:235,0,23	0/1:17,0:17:17.56:78,0,18	0/1:17,0:17:48.47:48,0,253	0/1:24,0:24:99:253,0,175	0/1:14,0:14:99:132,0,117	0/0:9,0:9:15.05:0,15,350	0/0:6,0:6:18.06:0,18,454	0/0:5,0:5:7.13:0,7,39	0/1:6,0:6:23.28:28,0,23	0/1:15,2:17:59.05:368,0,59	1/1:9,0:9:11.38:75,11,0	0/0:4,0:4:2.51:0,3,7	1/1:7,0:7:11.67:101,12,0	0/1:11,0:11:43.97:162,0,44	0/1:4,0:4:8.27:27,0,8	0/1:24,0:24:99:254,0,228	0/1:9,0:9:54.30:191,0,54	0/1:18,3:21:0.05:648,0,0	0/1:6,3:9:32.70:305,0,33
chr10	23995175	.	TTTG	T	3672.59	PASS	AB=0.584;AC=12;AF=0.214;AN=56;BaseQRankSum=12.204;DP=599;FS=0.000;HRun=0;HaplotypeScore=82.4736;InbreedingCoeff=0.7855;MQ=72.19;MQ0=0;MQRankSum=0.700;QD=24.81;ReadPosRankSum=2.059;VQSLOD=3.3901;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:17.99:0,18,325	0/0:13,0:13:24.08:0,24,491	0/0:24,0:23:35.59:0,36,631	0/0:9,0:8:6.02:0,6,91	0/0:34,0:34:75.26:0,75,1516	0/0:26,0:26:63.20:0,63,1252	0/0:17,0:17:36.12:0,36,737	0/0:39,0:39:90.30:0,90,1778	0/0:13,0:13:27.09:0,27,552	1/1:12,11:23:30.09:416,30,0	1/1:7,17:24:38.77:457,39,0	0/0:27,0:27:66.23:0,66,1351	0/0:32,0:32:84.24:0,84,1607	0/0:23,0:23:60.16:0,60,1104	0/0:23,0:23:51.14:0,51,957	0/0:19,0:19:30.10:0,30,614	0/1:3,7:10:5.01:115,0,5	0/1:3,8:11:24.53:280,0,25	1/1:8,9:17:27.08:371,27,0	1/1:5,28:33:81.16:1123,81,0	1/1:4,26:30:63.21:911,63,0	0/0:23,0:23:60.19:0,60,1191	0/0:15,0:15:33.11:0,33,674	0/0:14,0:14:36.12:0,36,737	0/0:24,0:24:66.21:0,66,1309	0/0:25,0:25:10.78:0,11,967	0/0:36,0:36:81.28:0,81,1657	0/0:5,0:5:15.05:0,15,307
chr10	23995921	.	TAA	T	5103.46	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=13.806;DP=641;FS=1.601;HRun=7;HaplotypeScore=74.0617;InbreedingCoeff=0.9985;MQ=82.91;MQ0=5;MQRankSum=-0.461;QD=30.56;ReadPosRankSum=-1.374;VQSLOD=4.6341;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:27.09:0,27,467	0/0:10,0:10:24.08:0,24,420	0/0:19,0:19:48.14:0,48,723	0/0:18,0:18:39.13:0,39,651	0/0:30,0:30:84.28:0,84,1435	0/0:21,0:21:60.19:0,60,998	0/0:17,0:17:48.15:0,48,813	0/0:36,0:36:84.25:0,84,1383	0/0:19,0:19:51.17:0,51,885	1/1:4,33:36:84.24:1057,84,0	1/1:2,27:26:58.71:762,59,0	0/0:30,0:30:90.29:0,90,1523	0/0:36,0:36:99:0,102,1769	0/0:29,0:29:81.27:0,81,1386	0/0:29,0:29:75.24:0,75,1260	0/0:25,0:25:72.24:0,72,1234	1/1:3,13:16:36.11:458,36,0	1/1:2,10:11:27.08:344,27,0	1/1:3,17:20:54.17:686,54,0	1/1:1,29:30:81:1032,81,0	1/1:1,22:23:60.19:765,60,0	0/0:21,0:21:63.22:0,63,1101	0/0:26,0:26:78.25:0,78,1317	0/0:14,0:14:42.13:0,42,697	0/0:26,0:26:72.25:0,72,1260	0/0:23,0:23:63.22:0,63,1102	0/0:25,0:25:75.26:0,75,1311	0/0:11,0:11:21.07:0,21,367
chr10	23997310	.	G	GT	2470.75	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-7.217;DP=666;FS=5.272;HRun=5;HaplotypeScore=61.5216;InbreedingCoeff=0.9918;MQ=82.09;MQ0=0;MQRankSum=-2.317;QD=30.13;ReadPosRankSum=1.212;VQSLOD=4.3822;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:81.18:0,81,861	0/0:8,0:8:21.05:0,21,225	0/0:23,0:23:55.62:0,56,598	0/0:13,0:13:29.99:0,30,310	0/0:38,0:38:99:0,105,1119	0/0:27,0:27:78.19:0,78,835	0/0:16,0:16:42.08:0,42,441	0/0:19,0:19:42.08:0,42,438	0/0:24,0:24:72.18:0,72,773	0/0:32,0:31:84.20:0,84,897	0/0:32,0:32:90.22:0,90,966	0/0:21,0:21:63.16:0,63,677	0/0:27,0:27:78.17:0,78,822	0/0:25,0:25:72.15:0,72,761	0/0:40,0:40:99:0,114,1225	0/0:26,0:26:75.15:0,75,781	0/0:13,0:13:36.08:0,36,377	0/0:12,0:12:24.06:0,24,258	0/0:19,0:19:49.65:0,50,509	0/0:29,0:29:87.20:0,87,926	0/0:12,0:12:36.07:0,36,378	0/0:28,0:28:84.21:0,84,902	0/0:20,0:20:54.14:0,54,580	0/0:21,0:21:63.11:0,63,657	0/0:28,0:28:78.19:0,78,831	1/1:4,31:34:96.30:1244,96,0	1/1:6,32:37:90.28:1170,90,0	1/1:2,6:8:15.05:197,15,0
chr10	23997996	.	A	AT	5263.82	PASS	AB=0.926;AC=15;AF=0.268;AN=56;BaseQRankSum=-11.865;DP=605;FS=1.632;HRun=1;HaplotypeScore=55.0279;InbreedingCoeff=0.9130;MQ=81.41;MQ0=0;MQRankSum=0.206;QD=30.78;ReadPosRankSum=0.371;VQSLOD=4.4792;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,132,1634	0/0:9,0:9:27.05:0,27,319	0/0:20,0:19:41.34:0,41,528	0/0:12,0:12:30.01:0,30,324	0/0:19,0:19:57.18:0,57,724	0/0:28,0:28:81.23:0,81,1016	0/0:17,0:17:51.09:0,51,587	0/0:36,0:36:99:0,105,1321	0/0:11,0:11:33.09:0,33,412	1/1:1,40:41:99:1668,120,0	1/1:0,19:19:47.90:606,48,0	0/0:30,0:30:87.24:0,87,1083	0/0:16,0:16:48.16:0,48,619	0/0:24,0:24:72.23:0,72,916	0/0:30,0:30:90.25:0,90,1122	0/0:24,0:24:69.19:0,69,864	1/1:1,16:17:42.12:584,42,0	1/1:0,7:7:18.06:259,18,0	1/1:3,23:26:72.18:977,72,0	1/1:1,20:21:57.08:770,57,0	1/1:2,13:15:27.09:388,27,0	0/0:21,0:21:60.16:0,60,736	0/0:15,0:15:45.12:0,45,555	0/0:18,0:18:54.13:0,54,656	0/0:31,0:31:93.28:0,93,1178	0/1:23,2:25:11.19:11,0,755	0/0:19,0:19:54.13:0,54,642	0/0:9,0:9:27.09:0,27,349
chr10	23998289	.	A	AAT	5366.41	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-12.120;DP=533;FS=0.000;HRun=0;HaplotypeScore=63.0776;InbreedingCoeff=0.9571;MQ=71.74;MQ0=0;MQRankSum=-2.825;QD=42.59;ReadPosRankSum=0.498;VQSLOD=6.3092;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:33.88:0,34,432	0/0:6,0:6:15.05:0,15,197	0/0:12,0:12:21.07:0,21,270	0/0:17,0:17:18.93:0,19,293	0/0:28,0:28:78.24:0,78,1010	0/0:22,0:22:60.18:0,60,773	0/0:16,0:16:42.14:0,42,551	0/0:27,0:27:63.17:0,63,779	0/0:15,0:15:33.09:0,33,418	1/1:3,21:24:66.21:1103,66,0	1/1:4,14:18:39.13:669,39,0	0/0:15,0:15:39.13:0,39,511	0/0:24,0:24:63.20:0,63,828	0/0:28,0:28:75.23:0,75,970	0/0:22,0:22:54.17:0,54,709	0/0:19,0:19:51.16:0,51,656	1/1:4,22:26:66.23:1132,66,0	1/1:2,10:13:36.12:586,36,0	1/1:4,13:17:39.13:669,39,0	1/1:1,25:27:69.23:1157,69,0	1/1:0,1:1:3.01:51,3,0	0/0:11,0:11:30.08:0,30,380	0/0:21,0:21:48.13:0,48,601	0/0:7,0:7:12.04:0,12,158	0/0:24,0:23:72.23:0,72,946	0/0:20,0:20:51.17:0,51,670	0/0:38,0:38:90.29:0,90,1183	0/0:17,0:17:45.15:0,45,591
chr10	23998522	.	GGA	G	5809.45	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=15.334;DP=659;FS=0.000;HRun=0;HaplotypeScore=93.4125;InbreedingCoeff=0.9917;MQ=93.70;MQ0=1;MQRankSum=-5.075;QD=41.20;ReadPosRankSum=2.394;VQSLOD=6.7997;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:72.72:0,73,1440	0/0:8,0:8:24.08:0,24,487	0/0:27,0:27:75.04:0,75,1389	0/0:37,0:36:99:0,108,1800	0/0:27,0:27:81.26:0,81,1585	0/0:29,0:29:87.30:0,87,1756	0/0:21,0:21:63.20:0,63,1187	0/0:42,0:42:99:0,126,2437	0/0:17,0:17:51.16:0,51,1000	1/1:0,17:17:51.07:747,51,0	1/1:0,31:31:78.27:1259,78,0	0/0:20,0:20:60.18:0,60,1137	0/0:29,0:29:87.29:0,87,1694	0/0:29,0:29:87.30:0,87,1738	0/0:34,0:34:99:0,99,1850	0/0:26,0:26:78.27:0,78,1581	1/1:0,21:21:48.16:779,48,0	1/1:0,5:5:12.04:186,12,0	1/1:0,18:18:54.18:860,54,0	1/1:0,31:31:81.28:1298,81,0	1/1:0,18:18:42.14:681,42,0	0/0:17,0:17:51.18:0,51,1035	0/0:21,0:21:60.15:0,60,1148	0/0:28,0:28:84.29:0,84,1685	0/0:13,0:13:39.13:0,39,792	0/0:22,1:23:20.48:0,20,1257	0/0:34,0:33:99:0,102,2049	0/0:9,0:9:18.06:0,18,365
chr10	23999422	.	ATCTC	A	2954.92	PASS	AB=1.000;AC=27;AF=0.482;AN=56;BaseQRankSum=9.406;DP=726;FS=1.547;HRun=0;HaplotypeScore=162.8158;InbreedingCoeff=0.8538;MQ=73.33;MQ0=24;MQRankSum=-3.366;QD=10.22;ReadPosRankSum=-5.280;VQSLOD=1.7598;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:57.19:0,57,1142	1/1:12,0:12:12.04:154,12,0	0/0:82,0:28:10.86:0,11,311	0/0:100,0:48:6.05:0,6,302	1/1:25,0:25:12.52:153,13,0	1/1:30,0:30:24.08:312,24,0	1/1:20,0:20:9.03:124,9,0	1/1:9,25:34:69.16:1047,69,0	1/1:12,0:12:6.02:78,6,0	0/0:23,0:24:24.54:0,25,1189	0/0:12,0:12:31.92:0,32,656	1/1:12,0:13:8.76:117,9,0	1/1:17,0:17:21.07:270,21,0	1/1:23,0:23:18.01:203,18,0	0/0:24,0:25:59.20:0,59,1151	0/0:22,0:22:48.16:0,48,1074	0/0:21,0:21:2.33:0,2,770	0/0:19,0:19:49.92:0,50,820	0/0:16,0:17:29.89:0,30,618	0/0:24,0:24:51.17:0,51,1087	0/0:23,0:23:48.16:0,48,865	1/1:26,0:27:13.13:158,13,0	1/1:25,0:25:11.91:155,12,0	1/1:21,0:21:6.02:86,6,0	1/1:22,0:22:24.08:312,24,0	0/0:23,0:23:53.19:0,53,851	0/0:22,0:22:38.90:0,39,476	0/1:8,0:8:0.19:0,0,230
chr10	23999436	.	CTCTCTGTGTG	C	6949.92	PASS	AB=0.886;AC=28;AF=0.500;AN=56;BaseQRankSum=10.518;DP=729;FS=1.387;HRun=0;HaplotypeScore=198.2925;InbreedingCoeff=0.6506;MQ=65.80;MQ0=26;MQRankSum=-4.545;QD=19.52;ReadPosRankSum=0.682;VQSLOD=3.8104;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:62.05:0,62,2223	1/1:3,7:11:11.83:377,12,0	0/0:68,0:17:17.06:0,17,475	0/0:71,0:25:5.36:0,5,308	1/1:1,33:34:13.90:397,14,0	1/1:2,25:28:24.08:790,24,0	0/1:3,14:18:13.90:193,0,14	1/1:38,0:37:36.81:1297,37,0	1/1:1,8:9:6.02:202,6,0	0/0:28,0:28:48.60:0,49,2705	0/0:16,0:16:40.46:0,40,1603	1/1:1,15:17:8.84:243,9,0	1/1:0,22:22:21.07:700,21,0	1/1:2,17:21:21.07:622,21,0	0/0:28,0:28:63.21:0,63,2225	0/0:19,0:19:57.20:0,57,2363	0/0:21,0:21:49.22:0,49,1691	0/0:18,0:18:52.94:0,53,1463	0/0:18,0:16:42.14:0,42,1546	0/0:29,0:29:72.25:0,72,2608	0/0:30,0:30:68.26:0,68,1915	1/1:2,19:22:14.32:390,14,0	1/1:1,30:31:14.65:473,15,0	1/1:4,18:22:6.02:148,6,0	1/1:1,24:25:24.08:810,24,0	0/1:23,0:23:99:190,0,801	0/1:24,0:24:99:101,0,411	0/1:11,0:10:15.97:16,0,241
chr10	23999440	.	CTGTGTGTG	C	4002.69	PASS	AB=0.988;AC=30;AF=0.536;AN=56;BaseQRankSum=11.032;DP=715;FS=6.807;HRun=0;HaplotypeScore=191.7444;InbreedingCoeff=0.7423;MQ=62.94;MQ0=25;MQRankSum=-8.168;QD=11.40;ReadPosRankSum=-0.053;VQSLOD=1.5837;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:44.59:0,45,1577	1/1:10,0:10:11.78:199,12,0	0/0:59,0:12:6.02:0,6,191	0/0:62,0:20:2.97:0,3,20	1/1:34,0:34:13.66:183,14,0	1/1:27,0:27:24.08:396,24,0	0/1:18,0:18:38.25:85,0,38	0/1:38,0:38:95.66:197,0,96	1/1:8,0:8:6.02:96,6,0	0/0:28,0:27:57.20:0,57,2051	0/0:16,0:16:39.13:0,39,1312	1/1:17,0:17:8.91:147,9,0	1/1:22,0:22:21.07:324,21,0	1/1:20,0:20:21.07:317,21,0	0/0:27,0:28:36.12:0,36,1395	0/0:19,0:19:51.17:0,51,1870	0/0:22,0:23:42.39:0,42,1345	0/0:18,0:20:33.07:0,33,927	0/0:20,0:18:36.12:0,36,1221	0/0:31,0:31:60.21:0,60,2115	0/0:32,0:32:44.44:0,44,1424	1/1:21,0:21:13.87:213,14,0	1/1:31,0:31:14.78:210,15,0	1/1:21,0:21:3.01:48,3,0	1/1:24,0:23:24.08:380,24,0	1/1:13,10:23:29.58:623,30,0	1/1:10,14:25:17.66:431,18,0	1/1:7,4:10:6.02:153,6,0
chr10	24000355	.	A	AATATATAT	499.22	PASS	AB=0.833;AC=16;AF=0.571;AN=28;BaseQRankSum=-2.558;DP=173;FS=7.203;HRun=0;HaplotypeScore=52.5779;InbreedingCoeff=0.4787;MQ=64.95;MQ0=7;MQRankSum=1.033;QD=6.16;ReadPosRankSum=0.639;VQSLOD=0.1761;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/1:1,0:2:0:0,0,0	./.	./.	0/1:5,0:4:0.01:0,0,0	0/0:2,0:2:0:0,0,0	./.	1/1:33,0:33:13.25:192,13,0	1/1:4,0:4:5.74:30,6,0	./.	./.	1/1:3,0:3:2.68:11,3,0	./.	1/1:3,0:3:3.01:53,3,0	0/0:5,0:5:0:0,0,0	./.	1/1:11,3:19:4.77:243,5,0	1/1:4,0:4:2.96:19,3,0	./.	./.	./.	./.	./.	./.	1/1:8,0:8:12.91:50,13,0	0/0:8,0:9:5.84:0,6,86	0/0:5,0:6:3.01:0,3,56	0/0:4,0:5:12.43:0,12,164
chr10	24000373	.	T	TATAC	1455.23	PASS	AB=0.788;AC=16;AF=0.381;AN=42;BaseQRankSum=-5.405;DP=152;FS=0.876;HRun=0;HaplotypeScore=29.9175;InbreedingCoeff=0.2587;MQ=70.86;MQ0=7;MQRankSum=3.205;QD=16.35;ReadPosRankSum=1.065;VQSLOD=2.6613;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:2,0:2:2.99:0,3,24	./.	0/1:16,0:6:1.10:1,0,17	0/0:35,0:8:7.19:0,7,34	0/0:1,2:3:2.73:0,3,12	1/1:4,0:4:8.97:72,9,0	1/1:1,0:1:3:25,3,0	0/1:10,23:33:13.62:719,0,14	1/1:0,3:3:6.02:161,6,0	./.	./.	1/1:0,2:3:3.01:80,3,0	1/1:2,0:2:5.99:49,6,0	1/1:3,0:3:8.75:76,9,0	0/0:1,0:1:3:0,3,25	0/0:1,0:1:3:0,3,25	0/1:15,0:15:23.27:23,0,51	0/0:4,0:4:3.65:0,4,27	0/0:2,0:2:5.95:0,6,42	./.	./.	./.	0/0:2,0:2:2.74:0,3,12	./.	0/1:2,7:9:12.51:383,0,13	0/0:4,0:4:8.95:0,9,75	0/0:1,0:1:3.01:0,3,36	0/0:7,0:6:18.03:0,18,230
chr10	24004722	.	T	TTAAA	2571.86	PASS	AB=0.763;AC=26;AF=0.591;AN=44;BaseQRankSum=1.095;DP=273;FS=4.172;HRun=0;HaplotypeScore=54.6456;InbreedingCoeff=0.5398;MQ=64.44;MQ0=1;MQRankSum=-4.247;QD=16.59;ReadPosRankSum=-3.754;VQSLOD=2.1755;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:9.03:0,9,141	1/1:1,0:1:3.01:52,3,0	./.	./.	1/1:7,0:13:14.99:147,15,0	1/1:11,0:12:15.90:208,16,0	1/1:6,0:6:3.01:68,3,0	1/1:46,0:46:41.33:514,41,0	1/1:8,0:8:6.02:108,6,0	0/0:11,0:11:8.39:0,8,103	0/0:4,0:4:3.01:0,3,47	1/1:7,0:7:0.89:2,1,0	1/1:4,0:5:6:79,6,0	1/1:5,0:5:3.01:56,3,0	0/0:9,0:9:6.02:0,6,94	0/0:3,0:3:3.01:0,3,47	0/0:26,0:26:36.08:0,36,517	0/0:12,0:13:21.07:0,21,327	0/0:11,0:10:9.02:0,9,120	./.	0/1:8,1:9:18.93:65,0,19	./.	./.	./.	1/1:8,0:9:12:180,12,0	1/1:2,7:9:21.07:498,21,0	1/1:10,4:14:21.06:431,21,0	0/1:4,6:10:9.87:323,0,10
chr10	24004779	.	TGAGAGAGA	T	1681.88	PASS	AB=0.808;AC=14;AF=0.292;AN=48;BaseQRankSum=-0.871;DP=314;FS=1.174;HRun=0;HaplotypeScore=92.5936;InbreedingCoeff=0.6287;MQ=48.84;MQ0=7;MQRankSum=-5.200;QD=17.70;ReadPosRankSum=1.716;VQSLOD=2.4336;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:5,0:8:0.01:51,0,0	./.	./.	./.	0/0:16,0:16:5.48:0,5,154	0/0:9,0:8:6.02:0,6,136	0/0:7,0:9:18.06:0,18,505	0/0:30,0:29:43.70:0,44,1397	0/0:7,0:10:6.02:0,6,151	1/1:7,4:11:9.03:210,9,0	1/1:4,4:8:9.03:214,9,0	0/0:6,0:10:9:0,9,290	0/0:1,0:8:6.02:0,6,208	0/0:13,0:13:15.05:0,15,314	0/0:2,0:9:24.07:0,24,474	0/0:0,0:7:15.03:0,15,283	1/1:12,5:17:10.70:299,11,0	0/1:14,2:15:91.51:178,0,92	1/1:15,3:17:12.04:282,12,0	1/1:1,7:9:18.06:431,18,0	1/1:5,2:7:9.02:177,9,0	0/0:5,0:5:0:0,0,0	./.	0/0:4,0:6:3.01:0,3,104	0/0:13,0:15:3.01:0,3,57	0/0:6,0:8:15.05:0,15,302	0/0:6,0:13:24.08:0,24,485	0/0:12,0:14:21.07:0,21,512
chr10	24005079	.	GGTGA	G	15743.47	PASS	AB=0.552;AC=31;AF=0.554;AN=56;BaseQRankSum=17.191;DP=665;FS=5.600;HRun=0;HaplotypeScore=128.5420;InbreedingCoeff=0.9225;MQ=93.15;MQ0=1;MQRankSum=-8.909;QD=44.47;ReadPosRankSum=3.435;VQSLOD=5.5721;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:39:99:0,117,3063	1/1:0,8:8:21.07:382,21,0	0/0:31,0:31:82.52:0,83,2023	0/0:30,0:30:74.74:0,75,1734	1/1:1,16:17:39.13:706,39,0	1/1:2,27:29:69.24:1255,69,0	1/1:0,21:21:54.19:982,54,0	1/1:8,27:35:81.24:1393,81,0	1/1:4,23:27:57.04:1036,57,0	0/0:26,0:26:66.23:0,66,1700	0/0:15,0:15:45.14:0,45,1123	1/1:1,18:18:54.19:982,54,0	1/1:4,24:28:63.22:1146,63,0	1/1:1,37:38:99:1854,102,0	0/0:37,0:37:99:0,99,2594	0/0:22,0:21:57.20:0,57,1460	0/0:23,0:23:63.22:0,63,1649	0/0:5,0:5:12.04:0,12,314	0/0:23,0:23:57.20:0,57,1437	0/0:14,0:14:39.13:0,39,1021	0/0:45,0:45:99:0,126,3208	1/1:0,12:12:30.10:545,30,0	1/1:1,24:25:57.06:1036,57,0	1/1:2,24:26:65.86:1200,66,0	1/1:0,12:12:30.10:545,30,0	0/1:3,13:16:33.34:719,0,33	1/1:3,30:33:84.09:1527,84,0	1/1:0,8:8:24.08:436,24,0
chr10	24005521	.	T	TTAA	1430.22	PASS	AB=1.000;AC=27;AF=0.675;AN=40;BaseQRankSum=1.408;DP=191;FS=3.367;HRun=0;HaplotypeScore=34.7800;InbreedingCoeff=0.5458;MQ=81.28;MQ0=0;MQRankSum=-2.023;QD=11.35;ReadPosRankSum=-0.213;VQSLOD=2.4883;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,3:8:6.02:117,6,0	1/1:6,0:6:5.74:30,6,0	./.	./.	1/1:3,0:3:2.97:20,3,0	1/1:4,0:4:5.85:45,6,0	./.	1/1:44,0:42:47.49:413,47,0	./.	0/0:9,0:9:15.05:0,15,203	0/0:7,0:7:6.02:0,6,81	1/1:5,0:5:8.86:83,9,0	./.	1/1:7,0:7:8.92:94,9,0	1/1:0,2:2:6.02:117,6,0	1/1:5,2:8:6.02:117,6,0	0/1:10,0:10:10.54:11,0,217	0/0:7,0:7:12.02:0,12,146	1/1:10,9:19:27.04:409,27,0	./.	1/1:3,0:3:3.01:59,3,0	./.	1/1:2,0:2:2.90:16,3,0	./.	1/1:5,0:5:5.85:45,6,0	0/0:7,0:7:6.02:0,6,81	0/0:9,0:9:15.05:0,15,203	0/0:3,0:3:3.01:0,3,41
chr10	24005541	.	A	AAT	900.44	PASS	AB=0.895;AC=16;AF=0.296;AN=54;BaseQRankSum=0.220;DP=189;FS=12.133;HRun=0;HaplotypeScore=23.0710;InbreedingCoeff=-0.4331;MQ=58.62;MQ0=1;MQRankSum=-0.698;QD=7.09;ReadPosRankSum=3.970;VQSLOD=0.7792;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:12,0:12:0.68:1,0,228	0/1:1,2:3:31.67:98,0,32	0/0:2,0:2:6.02:0,6,75	./.	0/1:7,0:7:17.07:17,0,222	0/1:2,1:3:43.67:44,0,72	0/1:3,0:3:15.81:16,0,56	0/1:22,16:35:99:576,0,417	0/1:2,0:2:32.12:32,0,35	0/0:9,0:9:21.07:0,21,297	0/0:9,0:9:27.09:0,27,371	0/1:3,3:6:40.65:41,0,110	0/1:2,0:2:32.80:33,0,34	0/1:7,0:7:54.29:54,0,105	0/1:5,0:5:12.69:13,0,106	0/1:9,0:9:6.66:7,0,182	0/0:9,0:9:24.08:0,24,340	0/0:10,0:10:30.05:0,30,381	0/1:20,0:20:17.85:18,0,361	0/0:3,0:3:9.03:0,9,122	0/1:3,0:3:7.68:8,0,35	0/0:1,0:1:3.01:0,3,41	0/1:4,0:4:42.96:43,0,110	0/0:1,0:1:3.01:0,3,40	0/1:1,2:3:34.69:47,0,35	0/0:5,0:5:15.05:0,15,206	0/0:11,0:11:30.10:0,30,419	0/0:2,0:2:6.02:0,6,84
chr10	24006323	.	C	CT	9952.61	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-12.516;DP=668;FS=6.363;HRun=6;HaplotypeScore=62.1436;InbreedingCoeff=0.9785;MQ=69.40;MQ0=0;MQRankSum=-2.173;QD=31.10;ReadPosRankSum=0.624;VQSLOD=5.4050;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:72.14:0,72,726	1/1:0,18:18:54.17:679,54,0	0/0:19,0:17:14.56:0,15,199	0/0:20,0:18:4.43:0,4,189	1/1:0,24:24:72.19:888,72,0	1/1:6,26:32:75.24:943,75,0	1/1:2,13:15:36.07:435,36,0	1/1:7,32:39:96.31:1203,96,0	1/1:2,22:24:60.19:755,60,0	0/0:31,0:31:84.18:0,84,851	0/0:29,0:29:84.19:0,84,856	1/1:1,21:22:54.17:679,54,0	1/1:4,21:25:57.18:711,57,0	1/1:3,24:27:66.21:828,66,0	0/0:20,0:20:57.11:0,57,574	0/0:27,0:27:69.10:0,69,686	0/0:27,0:27:75.17:0,75,765	0/0:22,0:22:60.13:0,60,612	0/0:12,0:12:33.08:0,33,337	0/0:25,0:25:66.14:0,66,673	0/0:17,0:17:48.11:0,48,490	1/1:4,25:29:57.18:717,57,0	1/1:2,20:22:57.18:717,57,0	1/1:0,19:19:57.18:717,57,0	1/1:2,22:24:54.17:679,54,0	0/0:29,0:29:72.14:0,72,729	0/0:26,0:25:69.15:0,69,704	0/0:17,0:16:33.07:0,33,337
chr10	24006584	.	T	TA	7996.59	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=-10.492;DP=527;FS=2.051;HRun=8;HaplotypeScore=59.5200;InbreedingCoeff=0.9948;MQ=79.36;MQ0=0;MQRankSum=-1.481;QD=27.67;ReadPosRankSum=2.972;VQSLOD=5.4698;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:21:54.01:0,54,494	1/1:1,11:12:33.07:367,33,0	0/0:25,0:25:31.95:0,32,434	0/0:19,0:17:12.40:0,12,153	1/1:2,20:22:54.03:590,54,0	1/1:3,11:14:27.08:312,27,0	1/1:1,10:11:27.08:312,27,0	1/1:6,18:24:54.13:603,54,0	1/1:2,17:19:42.12:485,42,0	0/0:27,0:27:72.03:0,72,659	0/0:21,0:21:56.98:0,57,512	1/1:3,13:16:30.09:345,30,0	1/1:3,24:27:66.20:761,66,0	1/1:0,19:19:51.14:580,51,0	0/0:19,0:19:57:0,57,511	0/0:8,0:8:21.01:0,21,192	0/0:16,0:16:45.02:0,45,412	0/0:14,0:14:36.02:0,36,329	0/0:18,0:18:38.98:0,39,344	0/0:21,0:21:53.97:0,54,480	0/0:28,0:28:63.03:0,63,576	1/1:2,10:12:30.09:346,30,0	1/1:2,13:15:36.11:415,36,0	1/1:1,21:22:54.16:623,54,0	1/1:0,15:15:42.12:485,42,0	1/1:3,19:22:32.71:630,33,0	1/1:2,23:25:59.97:692,60,0	1/1:0,14:14:39.12:450,39,0
chr10	24008556	.	A	AACACAT	11422.91	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=-2.435;DP=762;FS=2.254;HRun=0;HaplotypeScore=163.7230;InbreedingCoeff=0.9661;MQ=56.38;MQ0=17;MQRankSum=-10.268;QD=27.00;ReadPosRankSum=-1.643;VQSLOD=4.6359;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:40:95.06:0,95,1380	1/1:2,10:12:15.05:462,15,0	0/0:48,0:13:7.17:0,7,222	0/0:59,0:25:55.08:0,55,540	1/1:4,20:25:12.04:225,12,0	1/1:3,14:20:11.53:160,12,0	1/1:3,18:23:8.94:181,9,0	1/1:32,0:32:55.89:768,56,0	1/1:6,22:33:33.11:907,33,0	0/0:25,0:28:81.09:0,81,1259	0/0:15,0:17:45.04:0,45,670	1/1:6,20:28:18.06:465,18,0	1/1:3,24:29:33.10:1016,33,0	1/1:4,25:32:24.55:690,25,0	0/0:21,0:24:63.12:0,63,1197	0/0:19,0:24:63.12:0,63,1034	0/0:16,0:18:48.09:0,48,838	0/0:9,0:10:23.69:0,24,246	0/0:15,0:16:38.37:0,38,395	0/0:17,0:18:48.10:0,48,904	0/0:27,0:33:90.14:0,90,1624	1/1:3,24:27:41.17:995,41,0	1/1:6,18:25:23.55:369,24,0	1/1:7,24:31:29.99:713,30,0	1/1:4,25:30:26.83:782,27,0	1/1:4,25:31:83.89:1919,84,0	1/1:2,29:32:38.73:1269,39,0	1/1:3,9:12:24.03:501,24,0
chr10	24008558	.	C	CACAT	6549.46	PASS	AB=0.972;AC=27;AF=0.482;AN=56;BaseQRankSum=6.051;DP=771;FS=5.631;HRun=0;HaplotypeScore=161.4009;InbreedingCoeff=0.5625;MQ=55.20;MQ0=19;MQRankSum=-8.556;QD=15.56;ReadPosRankSum=4.251;VQSLOD=3.9147;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:89.98:0,90,1305	1/1:10,1:11:15.05:310,15,0	0/0:49,0:12:3.66:0,4,259	0/0:63,0:26:55.84:0,56,715	0/1:23,2:25:4.34:128,0,4	1/1:20,1:21:14.80:216,15,0	0/1:23,0:23:15.24:62,0,15	0/1:31,0:31:99:379,0,120	1/1:33,0:33:14.70:424,15,0	0/0:29,0:28:81.08:0,81,1070	0/0:17,0:17:45.05:0,45,630	1/1:25,3:28:18.06:366,18,0	1/1:29,0:29:3.10:585,3,0	0/1:31,0:32:10.24:317,0,10	0/0:24,0:24:49.97:0,50,1013	0/0:24,0:24:63.13:0,63,941	0/0:18,0:18:48.09:0,48,733	0/0:11,0:11:19.95:0,20,266	0/0:18,0:16:44.45:0,44,482	0/0:19,0:19:48.10:0,48,757	0/0:37,0:36:93.22:0,93,1440	1/1:28,1:29:13.41:486,13,0	1/1:23,2:25:13.33:347,13,0	0/1:27,1:28:14.10:346,0,14	1/1:29,0:29:1.56:386,2,0	1/1:28,2:30:10.47:1172,10,0	1/1:35,0:34:18:689,18,0	1/1:10,2:12:6.52:337,7,0
chr10	24008560	.	C	CAT	3479.11	PASS	AB=0.976;AC=17;AF=0.304;AN=56;BaseQRankSum=9.740;DP=766;FS=15.042;HRun=0;HaplotypeScore=147.6557;InbreedingCoeff=-0.1713;MQ=53.51;MQ0=19;MQRankSum=-8.072;QD=8.40;ReadPosRankSum=5.549;VQSLOD=2.2038;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:92.94:0,93,1130	0/1:12,0:12:6.56:140,0,7	0/0:49,0:11:13.02:0,13,247	0/0:63,0:25:61.16:0,61,613	0/1:24,0:24:50.36:50,0,71	0/1:18,2:20:73.93:102,0,74	0/1:21,0:21:19.54:20,0,61	0/1:31,0:31:99:436,0,225	0/1:33,1:34:99:193,0,105	0/0:30,0:29:83.96:0,84,925	0/0:17,0:17:47.99:0,48,550	0/1:28,0:28:5.02:141,0,5	0/1:26,2:28:31.31:292,0,31	0/1:30,1:31:61.89:160,0,62	0/0:24,0:24:65.60:0,66,856	0/0:23,0:23:63.01:0,63,758	0/0:18,0:18:48.04:0,48,597	0/0:11,0:11:23.34:0,23,234	0/0:19,0:17:50.45:0,50,478	0/0:19,0:19:51.07:0,51,647	0/0:38,0:37:99:0,102,1228	0/1:30,1:31:99:261,0,171	0/1:21,2:23:44.42:196,0,44	0/1:26,1:27:95.26:165,0,95	0/1:28,0:28:2.05:196,0,2	0/1:29,0:29:40.85:591,0,41	1/1:35,0:34:24.04:379,24,0	0/1:12,0:12:60.96:157,0,61
chr10	24009809	.	A	AGC	1583.59	PASS	AB=0.941;AC=14;AF=0.250;AN=56;BaseQRankSum=-2.532;DP=432;FS=45.500;HRun=0;HaplotypeScore=63.9964;InbreedingCoeff=-0.3133;MQ=62.63;MQ0=18;MQRankSum=2.115;QD=6.89;ReadPosRankSum=3.780;VQSLOD=1.0315;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:32.93:0,33,266	0/1:5,0:5:23.99:61,0,24	0/0:19,0:5:5.97:0,6,47	0/0:31,0:10:1.44:0,1,17	0/1:14,0:14:60.71:61,0,75	0/1:23,0:23:99:166,0,111	0/1:25,0:25:89.95:264,0,90	0/1:21,0:20:87.18:152,0,87	0/1:2,11:14:22.65:49,0,23	0/0:10,0:10:20.68:0,21,174	0/0:7,0:7:11.36:0,11,83	0/1:13,0:12:18.94:135,0,19	0/1:15,0:15:99:141,0,112	0/1:14,0:14:72.47:88,0,72	0/0:15,0:15:26.85:0,27,205	0/0:15,0:15:34.98:0,35,300	0/1:14,0:13:20.22:20,0,98	0/0:3,0:3:3.85:0,4,22	0/0:13,0:13:32.94:0,33,223	0/0:17,0:17:12.45:0,12,162	0/0:16,0:15:13.83:0,14,110	0/1:6,8:13:41.56:42,0,72	0/1:20,0:20:29.38:141,0,29	0/1:19,0:17:2.48:260,0,2	0/1:19,0:19:49.48:156,0,49	0/0:15,0:15:40.92:0,41,332	0/0:12,0:12:26.45:0,26,188	0/0:6,0:6:11.92:0,12,88
chr10	24010224	.	TA	T	8453.37	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=11.965;DP=460;FS=2.995;HRun=1;HaplotypeScore=53.3096;InbreedingCoeff=0.9735;MQ=69.28;MQ0=0;MQRankSum=1.211;QD=38.25;ReadPosRankSum=1.921;VQSLOD=5.3370;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:54.17:0,54,768	1/1:0,7:7:21.07:293,21,0	0/0:6,0:6:17.98:0,18,179	0/0:4,0:4:9.03:0,9,131	1/1:0,23:23:63.18:857,63,0	1/1:0,20:20:57.19:794,57,0	1/1:0,13:13:39.13:544,39,0	1/1:0,40:40:99:1490,114,0	1/1:0,16:16:45.15:628,45,0	0/0:31,0:31:93.24:0,93,1256	0/0:19,0:19:57.16:0,57,793	1/1:0,11:11:30.10:419,30,0	1/1:0,26:26:63.21:879,63,0	1/1:0,11:11:30.10:419,30,0	0/0:15,0:15:45.12:0,45,620	0/0:15,1:16:6.28:0,6,614	0/0:21,0:21:60.16:0,60,833	0/0:8,0:8:21.02:0,21,282	0/0:15,0:15:42.10:0,42,574	0/0:19,0:19:57.12:0,57,807	0/0:9,0:9:27.07:0,27,375	1/1:0,10:10:27.09:376,27,0	1/1:0,16:16:45.15:625,45,0	1/1:0,5:5:15.05:209,15,0	1/1:0,23:23:66.22:921,66,0	0/0:22,0:22:66.22:0,66,962	0/0:22,0:22:66.19:0,66,925	0/0:14,0:14:42.12:0,42,587
chr10	24010701	.	CT	C	5820.29	PASS	AB=0.556;AC=31;AF=0.554;AN=56;BaseQRankSum=12.608;DP=465;FS=5.171;HRun=9;HaplotypeScore=61.9226;InbreedingCoeff=0.9249;MQ=75.62;MQ0=0;MQRankSum=0.140;QD=22.47;ReadPosRankSum=3.566;VQSLOD=5.7901;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:39.10:0,39,440	1/1:2,10:12:27.01:247,27,0	0/0:14,1:13:5.69:0,6,307	0/0:13,0:12:20.61:0,21,233	1/1:3,26:29:75.03:686,75,0	1/1:3,15:18:39.02:357,39,0	1/1:1,8:9:24.01:220,24,0	1/1:6,26:32:72.01:655,72,0	1/1:0,12:12:33.02:302,33,0	0/0:25,0:25:57.17:0,57,652	0/0:22,0:22:60.16:0,60,675	1/1:1,12:13:30.02:274,30,0	1/1:2,14:16:39.01:357,39,0	1/1:5,7:12:21:192,21,0	0/0:23,0:23:54.03:0,54,603	0/0:18,1:19:23.67:0,24,516	0/0:9,0:9:21.06:0,21,235	0/0:13,0:13:33.02:0,33,352	0/0:16,0:16:45.13:0,45,519	0/0:25,0:25:60.18:0,60,692	0/0:10,0:10:27.08:0,27,312	1/1:3,11:14:33.01:302,33,0	1/1:0,16:16:48.03:439,48,0	0/1:1,4:5:4.84:95,0,5	1/1:1,17:18:51.03:467,51,0	1/1:2,24:26:40.42:624,40,0	1/1:1,20:21:51.03:467,51,0	1/1:1,5:6:15.01:137,15,0
chr10	24011161	.	C	CCA	2516.23	PASS	AB=0.885;AC=35;AF=0.648;AN=54;BaseQRankSum=0.653;DP=489;FS=5.193;HRun=0;HaplotypeScore=118.1869;InbreedingCoeff=0.2737;MQ=48.68;MQ0=38;MQRankSum=0.112;QD=6.59;ReadPosRankSum=0.740;VQSLOD=2.8330;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:28:59.95:0,60,635	1/1:5,0:6:7.56:64,8,0	0/0:18,0:5:2.98:0,3,21	0/0:25,0:6:3.01:0,3,35	1/1:32,1:29:19.58:89,20,0	1/1:22,0:23:13.07:91,13,0	1/1:13,0:11:6.26:17,6,0	1/1:29,0:24:14.15:66,14,0	1/1:12,1:13:12.37:85,12,0	1/1:11,3:12:24.29:303,24,0	0/1:4,14:18:29.73:186,0,30	1/1:14,0:15:18.43:181,18,0	1/1:12,0:12:17.45:107,17,0	1/1:13,0:13:11.08:53,11,0	0/0:12,0:11:17.88:0,18,189	0/1:13,1:13:13.85:14,0,170	0/1:10,2:10:16.60:39,0,17	1/1:10,2:12:3.23:162,3,0	1/1:13,4:13:15.94:216,16,0	1/1:6,11:18:0.36:126,0,0	0/1:38,4:38:99:570,0,116	./.	1/1:10,0:11:9.10:60,9,0	0/1:19,0:19:18.41:47,0,18	0/1:18,0:18:8.43:163,0,8	0/1:24,1:20:54.07:54,0,144	0/0:16,0:15:19.73:0,20,151	0/0:5,0:5:11.89:0,12,85
chr10	24011184	.	A	AAC	3162.34	PASS	AB=0.985;AC=34;AF=0.607;AN=56;BaseQRankSum=4.519;DP=484;FS=13.313;HRun=0;HaplotypeScore=122.9707;InbreedingCoeff=0.5580;MQ=47.94;MQ0=29;MQRankSum=-2.568;QD=9.06;ReadPosRankSum=-2.710;VQSLOD=2.1484;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:30:44.38:0,44,475	1/1:2,2:4:6.02:84,6,0	0/1:6,0:2:0:0,0,0	0/0:17,0:4:8.99:0,9,80	1/1:20,13:33:31.02:346,31,0	1/1:16,1:20:18.64:344,19,0	1/1:13,2:13:12.04:166,12,0	0/1:33,0:26:58.54:256,0,59	1/1:13,1:14:17.96:208,18,0	0/0:16,0:14:5.02:0,5,159	0/0:21,0:21:10.99:0,11,170	1/1:10,1:14:16.63:180,17,0	0/1:9,0:10:23.07:98,0,23	1/1:9,6:18:17.09:175,17,0	0/0:9,0:8:21.05:0,21,234	0/0:13,0:13:16.64:0,17,158	0/0:13,0:12:23.71:0,24,198	0/1:13,0:13:0.09:0,0,49	0/1:17,0:15:15.51:16,0,171	0/0:14,0:14:18.59:0,19,156	0/1:49,0:41:6.62:7,0,301	1/1:1,0:1:3.01:39,3,0	1/1:7,1:10:11.26:132,11,0	1/1:11,1:14:10.91:165,11,0	1/1:19,1:20:24.50:331,25,0	1/1:26,0:23:31.78:340,32,0	1/1:17,0:16:10.31:204,10,0	1/1:11,0:11:25.94:266,26,0
chr10	24011812	.	A	AT	2262.99	PASS	AB=1.000;AC=31;AF=0.554;AN=56;BaseQRankSum=4.391;DP=320;FS=2.314;HRun=9;HaplotypeScore=40.6944;InbreedingCoeff=0.8888;MQ=81.55;MQ0=2;MQRankSum=0.687;QD=13.80;ReadPosRankSum=0.252;VQSLOD=2.9480;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:8:24:0,24,208	1/1:8,0:8:14.71:89,15,0	0/0:27,0:15:32.49:0,32,263	0/0:22,0:14:7.03:0,7,112	1/1:15,0:15:35.46:225,35,0	1/1:10,0:10:26.36:158,26,0	1/1:3,0:3:2.94:18,3,0	1/1:28,0:26:55.52:305,56,0	1/1:10,0:10:14.37:79,14,0	0/0:12,0:12:32.99:0,33,286	0/0:14,0:14:26.98:0,27,234	1/1:7,0:7:14.71:89,15,0	1/1:6,0:6:11.77:72,12,0	1/1:8,0:8:20.66:130,21,0	0/0:9,0:9:23.98:0,24,205	0/0:3,0:3:9:0,9,78	0/0:20,0:20:59.97:0,60,515	0/0:5,0:5:8.99:0,9,77	0/0:15,0:14:29.98:0,30,260	0/0:10,0:10:23.97:0,24,205	0/0:11,0:11:26.99:0,27,234	0/1:1,0:1:0:0,0,0	1/1:5,0:5:11.43:61,11,0	1/1:3,0:3:5.75:32,6,0	1/1:20,0:20:46.91:278,47,0	1/1:2,15:17:22.16:444,22,0	1/1:3,13:16:24.06:265,24,0	1/1:0,7:7:21.06:232,21,0
chr10	24011815	.	T	TA	4052.74	PASS	AB=1.000;AC=30;AF=0.536;AN=56;BaseQRankSum=-6.491;DP=331;FS=3.440;HRun=0;HaplotypeScore=39.3086;InbreedingCoeff=0.7605;MQ=82.15;MQ0=2;MQRankSum=-0.472;QD=23.84;ReadPosRankSum=2.157;VQSLOD=4.8874;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:8:24.08:0,24,334	1/1:0,7:7:15.05:215,15,0	0/0:28,0:16:36.39:0,36,410	0/0:22,0:14:12.76:0,13,272	1/1:1,15:16:44.93:560,45,0	1/1:0,10:10:27.09:380,27,0	1/1:0,4:4:3.01:43,3,0	1/1:3,24:25:67.97:907,68,0	1/1:0,10:10:15.05:203,15,0	0/0:14,0:14:42.11:0,42,542	0/0:12,0:12:36.09:0,36,455	1/1:0,8:8:15.05:214,15,0	1/1:0,6:6:12.04:172,12,0	1/1:1,8:9:21.06:300,21,0	0/0:12,0:12:30.08:0,30,385	0/0:3,0:3:9.03:0,9,126	0/0:20,0:20:60.20:0,60,836	0/0:6,0:6:12.01:0,12,146	0/0:16,0:15:45.12:0,45,569	0/0:9,0:9:27.08:0,27,360	0/0:11,0:11:30.09:0,30,403	1/1:1,0:1:3:25,3,0	1/1:0,5:5:12.04:160,12,0	1/1:0,3:3:6.02:80,6,0	1/1:0,22:22:48.16:686,48,0	0/1:19,0:19:33.94:34,0,63	0/1:16,0:16:29.60:30,0,46	1/1:7,0:7:14.44:44,14,0
chr10	24013189	.	T	TTTA	13231.10	PASS	AB=1.000;AC=33;AF=0.589;AN=56;BaseQRankSum=0.933;DP=505;FS=0.718;HRun=0;HaplotypeScore=79.7008;InbreedingCoeff=0.9358;MQ=73.47;MQ0=0;MQRankSum=-2.327;QD=42.82;ReadPosRankSum=2.720;VQSLOD=6.3739;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:30.01:0,30,442	1/1:0,10:12:21.07:465,21,0	0/0:10,0:9:22.93:0,23,198	0/1:9,0:9:7.26:7,0,38	1/1:1,29:32:90.05:1634,90,0	1/1:1,21:24:51.17:1153,51,0	1/1:0,13:14:36.12:812,36,0	1/1:0,25:29:87.18:1520,87,0	1/1:0,13:14:30.10:696,30,0	0/0:25,0:25:75.21:0,75,1176	0/0:29,0:29:87.22:0,87,1252	1/1:0,13:13:30.10:677,30,0	1/1:0,17:18:39.13:885,39,0	1/1:1,16:20:42.14:910,42,0	0/0:23,0:23:68.98:0,69,983	0/0:11,0:12:36.08:0,36,507	0/0:14,0:14:35.99:0,36,462	0/0:12,0:12:29.95:0,30,389	0/0:16,0:16:48.09:0,48,684	0/0:33,0:33:99:0,99,1494	0/0:12,0:12:36.07:0,36,506	1/1:0,10:11:23.95:458,24,0	1/1:0,17:19:36.45:835,36,0	1/1:0,12:12:30.10:696,30,0	1/1:1,18:19:43.03:956,43,0	1/1:2,0:26:40.17:639,40,0	1/1:1,0:29:66.07:675,66,0	1/1:0,0:7:21.04:213,21,0
chr10	24013909	.	CAAAGAAAGAAAG	C	1235.31	PASS	AB=1.000;AC=13;AF=0.260;AN=50;BaseQRankSum=-0.979;DP=458;FS=7.168;HRun=0;HaplotypeScore=180.3036;InbreedingCoeff=0.7542;MQ=66.18;MQ0=2;MQRankSum=1.744;QD=10.93;ReadPosRankSum=0.650;VQSLOD=2.1849;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:18,0:16:0:0,0,0	0/0:9,0:9:9.02:0,9,268	./.	./.	0/0:21,0:22:24.08:0,24,600	0/0:16,0:16:24.08:0,24,721	0/0:14,0:14:9.03:0,9,151	./.	0/0:20,0:20:30.09:0,30,962	1/1:10,0:13:2.60:10,3,0	0/0:9,0:15:2.94:0,3,18	0/0:13,0:13:12.04:0,12,336	0/0:8,0:12:6.02:0,6,152	0/0:18,0:30:12.03:0,12,266	0/0:16,0:16:27.08:0,27,1151	0/0:17,0:17:27.09:0,27,1240	1/1:11,7:18:1.46:7,1,0	1/1:10,0:10:9:161,9,0	1/1:15,8:23:24.06:479,24,0	1/1:10,11:21:26.98:630,27,0	1/1:10,0:10:9:100,9,0	0/0:17,0:17:12.02:0,12,163	0/0:17,0:18:21.07:0,21,518	0/0:24,0:24:27.01:0,27,593	0/0:24,0:24:30.09:0,30,714	0/0:7,0:7:12:0,12,231	0/0:18,0:18:21.04:0,21,405	0/0:7,0:7:12.61:0,13,304
chr10	24013978	.	GAAGGAAGA	G	3669.53	PASS	AB=1.000;AC=22;AF=0.393;AN=56;BaseQRankSum=9.084;DP=484;FS=0.752;HRun=0;HaplotypeScore=160.5865;InbreedingCoeff=-0.0464;MQ=55.81;MQ0=6;MQRankSum=0.770;QD=11.33;ReadPosRankSum=1.614;VQSLOD=2.3236;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:16:48:0,48,1050	0/1:9,0:9:74.36:88,0,74	0/0:7,0:4:12.04:0,12,330	0/0:9,0:6:18.06:0,18,467	0/1:18,0:18:91.17:223,0,91	0/1:19,0:19:99:205,0,164	1/1:18,0:18:47.66:403,48,0	1/1:11,30:40:97.95:784,98,0	0/1:18,0:18:99:154,0,409	0/0:20,0:20:57.20:0,57,1428	0/0:19,0:19:48.16:0,48,1098	0/1:13,0:13:70.06:164,0,70	1/1:15,0:14:2.39:110,2,0	0/1:30,0:30:14.77:193,0,15	0/0:14,0:14:42.13:0,42,1303	0/0:16,0:16:48.13:0,48,1330	0/0:25,0:24:51.09:0,51,1035	0/1:8,0:8:16.46:16,0,281	0/0:21,0:21:41.58:0,42,994	0/1:23,0:23:8.05:8,0,876	0/0:12,0:12:36.06:0,36,803	1/1:9,0:9:26.49:218,26,0	0/1:19,0:19:99:145,0,114	0/1:18,0:17:3.78:225,0,4	0/1:19,0:19:99:207,0,106	0/1:18,0:18:21.48:251,0,21	0/1:15,0:15:56.56:223,0,57	0/1:14,0:14:52.02:52,0,294
chr10	24014038	.	TACACACACACACACACACACACACACAC	T	5715.82	PASS	AB=0.667;AC=25;AF=0.446;AN=56;BaseQRankSum=5.717;DP=433;FS=18.132;HRun=0;HaplotypeScore=276.5252;InbreedingCoeff=0.7759;MQ=72.72;MQ0=14;MQRankSum=-5.510;QD=33.04;ReadPosRankSum=-0.535;VQSLOD=2.1024;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:13:12.04:0,12,846	1/1:4,2:5:3.01:216,3,0	0/0:29,0:18:12.04:0,12,347	0/0:34,0:28:15.52:0,16,376	1/1:4,7:12:6.02:412,6,0	1/1:4,11:15:14.08:872,14,0	1/1:13,0:12:14.88:120,15,0	1/1:31,0:29:32.89:463,33,0	0/1:6,6:12:99:851,0,317	0/0:13,0:14:24.08:0,24,1205	0/0:12,0:12:12.04:0,12,389	1/1:7,0:7:8.94:80,9,0	1/1:5,10:14:3.01:216,3,0	1/1:5,9:14:3.01:216,3,0	0/0:13,0:11:24.08:0,24,2514	0/0:18,0:18:33.10:0,33,2702	0/0:19,0:19:24.08:0,24,1249	0/0:8,0:7:17.42:0,17,636	0/0:21,0:21:12.04:0,12,589	0/0:13,0:13:24.08:0,24,1667	0/0:23,0:23:54.18:0,54,3019	1/1:7,5:12:9.03:649,9,0	1/1:6,9:15:15.19:878,15,0	1/1:11,0:11:8.98:92,9,0	1/1:3,7:10:9.03:649,9,0	0/0:14,0:14:36.04:0,36,2871	0/0:13,0:12:21.07:0,21,1874	0/0:8,0:12:21.07:0,21,1578
chr10	24014061	.	A	AC	548.08	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=2.322;DP=429;FS=8.545;HRun=1;HaplotypeScore=90.5305;InbreedingCoeff=0.6723;MQ=44.39;MQ0=29;MQRankSum=-2.113;QD=10.54;ReadPosRankSum=-3.814;VQSLOD=-0.1729;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,1:22:31.77:0,32,380	0/0:4,0:3:1.82:0,2,5	0/0:26,0:5:12.04:0,12,153	0/0:33,0:13:33.10:0,33,415	0/0:9,0:9:4.26:0,4,13	0/0:14,0:14:3.20:0,3,17	1/1:13,0:12:14.87:120,15,0	1/1:4,10:12:32.89:400,33,0	0/0:8,0:7:11.16:0,11,64	0/0:13,0:13:38.99:0,39,471	0/0:10,0:10:12.04:0,12,152	1/1:3,0:3:8.94:80,9,0	0/0:11,0:10:2.04:0,2,6	0/0:9,0:10:2.04:0,2,6	0/0:20,0:18:41.68:0,42,531	0/0:18,0:18:48.14:0,48,599	0/0:26,0:24:42.31:0,42,551	0/0:14,0:13:23.97:0,24,298	0/0:18,0:16:41.97:0,42,465	0/0:26,0:25:54.04:0,54,660	0/0:40,0:39:64:0,64,1170	0/0:8,0:7:5.89:0,6,17	0/1:14,0:13:0.98:1,0,12	1/1:7,0:7:8.72:92,9,0	0/0:7,0:7:5.63:0,6,17	0/0:14,0:13:38.38:0,38,406	0/0:12,0:10:24.66:0,25,278	0/0:12,0:11:20.50:0,20,234
chr10	24014062	.	CA	C	666.45	PASS	AB=1.000;AC=25;AF=0.446;AN=56;BaseQRankSum=7.408;DP=423;FS=2.031;HRun=1;HaplotypeScore=84.4226;InbreedingCoeff=0.7634;MQ=44.65;MQ0=29;MQRankSum=-6.115;QD=5.65;ReadPosRankSum=2.040;VQSLOD=0.8090;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:23:31.88:0,32,350	1/1:3,0:2:2.37:8,2,0	0/0:25,0:4:12.04:0,12,153	0/0:32,0:12:33.11:0,33,418	1/1:8,0:8:4.59:15,5,0	1/1:14,0:14:11.36:37,11,0	1/1:5,8:12:8.02:110,8,0	1/1:14,1:12:32.89:400,33,0	0/1:8,0:7:18.35:18,0,35	0/0:13,0:13:37:0,37,456	0/0:10,0:10:12.04:0,12,152	1/1:0,3:3:8.94:80,9,0	1/1:11,0:10:2.37:8,2,0	1/1:10,0:10:2.37:8,2,0	0/0:20,0:18:41.67:0,42,553	0/0:18,0:18:48.14:0,48,617	0/0:26,0:24:45.13:0,45,542	0/0:13,0:12:29.58:0,30,338	0/0:17,0:15:42.21:0,42,477	0/0:26,0:25:55.06:0,55,681	0/0:41,0:40:69.96:0,70,1176	1/1:7,0:6:6.96:23,7,0	1/1:13,0:12:12.16:42,12,0	1/1:1,5:6:8.72:92,9,0	1/1:7,0:7:7.11:23,7,0	0/0:14,0:13:39.04:0,39,483	0/0:13,0:11:30.08:0,30,364	0/0:12,0:11:22.31:0,22,269
chr10	24014766	.	AT	A	1091.05	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=7.993;DP=310;FS=0.000;HRun=2;HaplotypeScore=29.2384;InbreedingCoeff=0.8546;MQ=83.96;MQ0=0;MQRankSum=-0.600;QD=34.10;ReadPosRankSum=2.182;VQSLOD=3.0255;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:24.07:0,24,339	0/0:3,0:3:9.03:0,9,135	0/0:13,0:13:28.64:0,29,505	0/0:6,0:6:15.05:0,15,219	0/0:19,0:19:54.18:0,54,808	0/0:17,0:17:48.16:0,48,719	0/0:4,0:4:12.04:0,12,180	0/0:33,0:32:99:0,99,1408	0/0:6,0:6:17.99:0,18,243	0/0:14,0:14:42.14:0,42,613	0/0:14,0:14:42.10:0,42,569	0/0:10,0:10:30.10:0,30,444	0/0:12,0:12:36.03:0,36,489	0/0:8,0:8:21.06:0,21,294	0/0:10,0:10:27.09:0,27,404	0/0:10,0:10:30.10:0,30,449	0/0:19,0:19:54.11:0,54,781	0/0:2,0:2:6.02:0,6,90	0/0:13,0:13:36.12:0,36,538	0/0:22,0:22:66.22:0,66,988	0/0:1,0:1:3.01:0,3,45	0/0:5,0:5:15.05:0,15,225	0/0:6,0:6:18.06:0,18,270	0/0:4,0:4:12.03:0,12,162	0/0:18,0:18:54.13:0,54,764	1/1:0,13:13:39.12:493,39,0	1/1:0,11:11:33.11:428,33,0	1/1:0,8:8:24.08:311,24,0
chr10	24015073	.	G	GA	14450.49	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=-15.166;DP=577;FS=11.774;HRun=1;HaplotypeScore=54.6957;InbreedingCoeff=0.9824;MQ=87.64;MQ0=0;MQRankSum=-4.280;QD=42.25;ReadPosRankSum=0.734;VQSLOD=4.2877;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:42.14:0,42,544	1/1:0,6:6:15.05:225,15,0	0/0:21,0:21:57.18:0,57,735	0/0:24,0:23:64.18:0,64,767	1/1:0,28:28:84.24:1234,84,0	1/1:0,22:22:63.21:944,63,0	1/1:0,12:12:33.11:495,33,0	1/1:1,36:37:99:1597,108,0	1/1:0,17:17:51.17:764,51,0	0/0:33,0:33:99:0,99,1260	0/0:19,0:19:54.18:0,54,701	1/1:1,19:19:51.17:764,51,0	1/1:0,21:21:60.20:899,60,0	1/1:0,29:29:84.28:1259,84,0	0/0:20,0:20:54.18:0,54,700	0/0:16,1:17:6.17:0,6,561	0/0:17,0:17:48.11:0,48,604	0/0:6,0:6:18.06:0,18,234	0/0:17,0:17:51.17:0,51,662	0/0:25,0:25:72.23:0,72,935	0/0:19,0:19:54.18:0,54,701	1/1:1,13:14:36.08:515,36,0	1/1:0,15:15:45.15:675,45,0	1/1:0,16:16:39.13:585,39,0	1/1:0,17:17:48.16:720,48,0	1/1:1,28:29:84.28:1259,84,0	1/1:0,44:43:99:1844,123,0	1/1:0,15:15:45.15:675,45,0
chr10	24017306	.	G	GGGAACCTAGATGAGGAAAA	68026.89	PASS	AB=0.684;AC=31;AF=0.554;AN=56;BaseQRankSum=4.460;DP=721;FS=1.656;HRun=0;HaplotypeScore=327.9085;InbreedingCoeff=0.9033;MQ=57.84;MQ0=0;MQRankSum=-19.465;QD=160.06;ReadPosRankSum=-3.081;VQSLOD=3.4151;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,132,5957	1/1:9,3:14:33.11:2675,33,0	0/0:22,0:20:51.16:0,51,2092	0/0:28,0:27:72.23:0,72,2830	1/1:24,9:35:81.24:4004,81,0	1/1:12,4:16:48.16:3550,48,0	1/1:21,1:26:60.21:4056,60,0	1/1:47,0:39:99:3974,102,0	1/1:16,5:24:60.16:4471,60,0	0/0:22,0:22:63.21:0,63,3050	0/0:20,0:20:54.19:0,54,2732	1/1:14,9:26:66.23:4904,66,0	1/1:24,7:31:84.24:5455,84,0	1/1:21,12:38:96.33:7393,96,0	0/0:25,0:25:66.18:0,66,3177	0/0:23,0:23:60.19:0,60,2823	0/0:32,0:32:88.54:0,89,3965	0/0:16,0:16:42.13:0,42,1821	0/0:11,0:11:33.10:0,33,1309	0/0:23,0:23:57.18:0,57,2815	0/0:26,0:26:78.27:0,78,4009	1/1:15,12:30:72.25:4817,72,0	1/1:23,9:32:75.25:4961,75,0	1/1:11,0:11:21.07:1104,21,0	1/1:13,6:26:48.16:4042,48,0	0/1:14,9:26:99:4410,0,303	1/1:25,11:41:99:7938,105,0	1/1:0,1:1:3.01:273,3,0
chr10	24017310	.	A	AC	2668.23	PASS	AB=0.990;AC=17;AF=0.304;AN=56;BaseQRankSum=17.274;DP=708;FS=4.743;HRun=1;HaplotypeScore=254.2728;InbreedingCoeff=-0.3153;MQ=57.47;MQ0=0;MQRankSum=-14.578;QD=6.57;ReadPosRankSum=3.940;VQSLOD=0.9657;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,141,1756	0/1:14,0:14:99:158,0,148	0/0:23,0:20:59.76:0,60,709	0/0:31,0:29:78.21:0,78,919	0/1:33,0:33:99:161,0,331	0/1:17,0:17:99:201,0,132	0/1:25,0:25:47.52:48,0,339	0/1:37,8:37:99:534,0,451	0/1:24,0:24:99:200,0,175	0/0:22,0:22:66.20:0,66,837	0/0:19,0:19:54.18:0,54,700	0/1:27,0:27:99:146,0,322	0/1:29,0:29:99:163,0,337	0/1:37,0:37:99:210,0,340	0/0:25,0:25:69.22:0,69,893	0/0:23,0:23:63.18:0,63,789	0/0:33,0:33:95.98:0,96,1169	0/0:17,0:17:51.13:0,51,630	0/0:12,0:12:36.08:0,36,436	0/0:22,0:22:60.14:0,60,746	0/0:28,0:28:78.25:0,78,1012	0/1:27,0:27:99:130,0,360	0/1:33,0:32:99:172,0,457	0/1:11,0:11:47.51:69,0,48	0/1:19,0:19:99:103,0,146	0/1:24,0:24:99:163,0,231	0/1:40,0:40:99:358,0,281	1/1:1,0:1:2.60:10,3,0
chr10	24018880	.	AAG	A	2404.48	PASS	AB=0.515;AC=5;AF=0.089;AN=56;BaseQRankSum=12.284;DP=696;FS=4.493;HRun=0;HaplotypeScore=115.7896;InbreedingCoeff=0.8013;MQ=80.20;MQ0=0;MQRankSum=-3.272;QD=36.43;ReadPosRankSum=0.452;VQSLOD=5.8258;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:63.19:0,63,1136	0/0:8,0:8:24.07:0,24,418	0/0:27,0:27:56.67:0,57,1016	0/0:18,0:18:24.27:0,24,533	0/0:36,0:36:99:0,105,1909	0/0:27,0:27:81.25:0,81,1450	0/0:20,0:20:60.19:0,60,1092	0/0:35,0:35:96.32:0,96,1756	0/0:20,0:20:57.20:0,57,1067	0/0:32,0:32:93.28:0,93,1664	0/0:30,0:30:90.26:0,90,1562	0/0:23,0:23:69.24:0,69,1279	0/0:27,0:27:78.25:0,78,1405	0/0:30,0:30:90.28:0,90,1622	0/0:29,0:29:87.29:0,87,1593	0/0:28,0:28:84.29:0,84,1552	0/0:26,0:26:72.23:0,72,1285	0/0:11,0:11:30.10:0,30,504	0/0:21,0:21:60.21:0,60,1097	0/0:37,0:37:99:0,108,1910	0/0:26,0:26:75.26:0,75,1397	0/0:26,0:26:75.24:0,75,1366	0/0:26,0:26:78.24:0,78,1390	0/0:23,0:23:60.17:0,60,1050	0/0:23,0:23:69.21:0,69,1219	0/1:2,32:34:10.10:1266,0,10	1/1:0,22:22:57.19:827,57,0	1/1:0,10:10:30.10:441,30,0
chr10	24018979	.	CAG	C	2554.90	PASS	AB=0.540;AC=5;AF=0.089;AN=56;BaseQRankSum=11.854;DP=678;FS=0.000;HRun=0;HaplotypeScore=91.6950;InbreedingCoeff=0.7725;MQ=85.80;MQ0=0;MQRankSum=-0.971;QD=41.88;ReadPosRankSum=1.758;VQSLOD=4.8056;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:42.14:0,42,853	0/0:16,0:16:48.15:0,48,924	0/0:29,0:29:81.17:0,81,1532	0/0:18,0:18:39.84:0,40,776	0/0:37,0:37:99:0,105,2031	0/0:19,0:18:57.18:0,57,1121	0/0:19,0:19:57.18:0,57,1121	0/0:40,0:40:99:0,120,2384	0/0:25,0:25:72.22:0,72,1379	0/0:34,0:34:99:0,102,2037	0/0:33,0:33:99:0,99,2010	0/0:29,0:29:87.27:0,87,1671	0/0:28,0:28:81.28:0,81,1633	0/0:26,0:26:78.25:0,78,1534	0/0:22,0:22:66.21:0,66,1292	0/0:29,0:29:87.29:0,87,1720	0/0:27,0:27:81.25:0,81,1589	0/0:18,0:18:54.17:0,54,1032	0/0:20,0:20:60.19:0,60,1153	0/0:24,0:24:72.23:0,72,1426	0/0:24,0:24:72.25:0,72,1463	0/0:17,0:17:51.18:0,51,1025	0/0:30,0:30:90.28:0,90,1698	0/0:18,0:18:54.17:0,54,1046	0/0:21,0:21:63.19:0,63,1229	0/1:5,29:34:73.52:1411,0,74	1/1:0,22:22:63.22:1027,63,0	1/1:0,5:5:15.05:245,15,0
chr10	24019076	.	G	GGCAC	25292.26	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=-9.252;DP=675;FS=0.295;HRun=0;HaplotypeScore=104.8562;InbreedingCoeff=0.9842;MQ=89.05;MQ0=0;MQRankSum=-7.961;QD=64.85;ReadPosRankSum=1.476;VQSLOD=7.0084;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:69.21:0,69,1238	1/1:2,13:17:42.14:1094,42,0	0/0:23,0:23:61.74:0,62,1072	0/0:31,0:31:84.20:0,84,1482	1/1:0,36:36:90.31:2362,90,0	1/1:5,20:26:60.21:1596,60,0	1/1:3,18:22:45.15:1189,45,0	1/1:7,13:20:57.20:1468,57,0	1/1:2,21:24:57.20:1518,57,0	0/0:28,0:28:81.28:0,81,1505	0/0:24,0:24:72.25:0,72,1343	1/1:3,24:27:69.24:1820,69,0	1/1:2,21:24:66.23:1739,66,0	1/1:2,26:28:72.25:1911,72,0	0/0:28,0:28:75.24:0,75,1364	0/0:25,0:25:72.24:0,72,1307	0/0:19,0:19:51.17:0,51,941	0/0:2,0:2:6.02:0,6,112	0/0:23,0:23:66.22:0,66,1185	0/0:32,0:32:93.32:0,93,1713	0/0:26,0:26:78.27:0,78,1456	1/1:3,26:29:78.27:2051,78,0	1/1:4,20:24:54.19:1437,54,0	1/1:6,16:22:38.81:1027,39,0	1/1:3,18:23:51.18:1359,51,0	1/1:6,30:36:96.30:2408,96,0	1/1:7,18:24:75.19:1836,75,0	1/1:0,6:6:18.06:477,18,0
chr10	24019283	.	AT	A	1344.09	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.513;DP=610;FS=1.162;HRun=7;HaplotypeScore=87.5559;InbreedingCoeff=0.9369;MQ=67.25;MQ0=0;MQRankSum=-1.066;QD=25.85;ReadPosRankSum=2.333;VQSLOD=4.1748;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:84.27:0,84,1051	0/0:11,0:11:33.11:0,33,415	0/0:5,0:5:8.99:0,9,96	0/0:7,0:7:16.53:0,17,155	0/0:37,0:36:99:0,102,1234	0/0:36,0:36:96.28:0,96,1182	0/0:16,0:16:42.12:0,42,515	0/0:39,0:39:99:0,108,1277	0/0:29,0:29:75.07:0,75,865	0/0:32,0:32:78.25:0,78,976	0/0:15,0:15:45.13:0,45,553	0/0:18,0:18:54.16:0,54,665	0/0:23,0:23:66.21:0,66,830	0/0:22,0:22:57.16:0,57,689	0/0:26,0:26:75.24:0,75,944	0/0:29,0:29:81.26:0,81,1019	0/0:19,0:19:42.13:0,42,528	0/0:13,0:13:39.12:0,39,490	0/0:16,0:16:42.13:0,42,528	0/0:29,0:29:84.26:0,84,1046	0/0:24,0:24:69.22:0,69,868	0/0:22,0:22:57.11:0,57,683	0/0:26,0:26:69.17:0,69,838	0/0:15,0:15:42.12:0,42,514	0/0:18,0:18:54.14:0,54,644	1/1:0,16:16:48.10:484,48,0	1/1:2,32:34:93.18:935,93,0	1/1:0,2:2:6.01:60,6,0
chr10	24019859	.	AT	A	1089.48	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=7.672;DP=410;FS=2.990;HRun=7;HaplotypeScore=41.5793;InbreedingCoeff=0.9272;MQ=80.96;MQ0=0;MQRankSum=-1.098;QD=21.36;ReadPosRankSum=2.779;VQSLOD=3.0479;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:42.13:0,42,528	0/0:4,0:4:12.03:0,12,139	0/0:9,0:9:21.05:0,21,246	0/0:19,0:18:38.41:0,38,411	0/0:27,0:27:81.24:0,81,994	0/0:17,0:17:42.13:0,42,528	0/0:9,0:9:24.08:0,24,302	0/0:29,0:29:75.21:0,75,907	0/0:7,0:7:21.07:0,21,264	0/0:12,0:12:33.11:0,33,415	0/0:18,0:18:48.15:0,48,600	0/0:10,0:10:27.09:0,27,340	0/0:13,0:13:33.11:0,33,412	0/0:15,0:15:39.12:0,39,491	0/0:13,0:13:39.12:0,39,491	0/0:8,0:8:15.05:0,15,189	0/0:25,0:25:75.19:0,75,902	0/0:12,0:12:33.10:0,33,412	0/0:9,0:9:15.05:0,15,189	0/0:26,0:26:63.16:0,63,752	0/0:7,0:7:21.05:0,21,250	0/0:8,0:8:21.07:0,21,264	0/0:23,0:23:66.21:0,66,830	0/0:5,0:5:15.05:0,15,189	0/0:20,0:20:60.19:0,60,755	1/1:3,18:21:54.12:551,54,0	1/1:3,23:26:60.13:612,60,0	1/1:0,4:4:6.01:61,6,0
chr10	24020129	.	T	TA	1756.63	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-7.316;DP=522;FS=4.809;HRun=1;HaplotypeScore=45.9563;InbreedingCoeff=0.9111;MQ=80.54;MQ0=0;MQRankSum=-4.133;QD=41.82;ReadPosRankSum=2.114;VQSLOD=4.0306;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:63.17:0,63,800	0/0:3,0:3:9.03:0,9,117	0/0:15,0:15:42.12:0,42,524	0/0:10,0:10:21.07:0,21,271	0/0:31,0:31:93.26:0,93,1163	0/0:24,0:24:72.23:0,72,935	0/0:17,0:17:51.15:0,51,647	0/0:47,0:47:99:0,138,1781	0/0:20,0:20:60.18:0,60,764	0/0:16,0:16:48.16:0,48,623	0/0:21,0:21:57.19:0,57,740	0/0:19,0:19:57.17:0,57,725	0/0:19,0:19:54.17:0,54,699	0/0:21,0:21:63.20:0,63,818	0/0:20,0:20:60.18:0,60,765	0/0:25,0:25:75.24:0,75,974	0/0:13,0:13:39.13:0,39,506	0/0:16,0:16:45.15:0,45,584	0/0:25,0:25:72.23:0,72,935	0/0:21,0:21:63.20:0,63,818	0/0:10,0:10:30.10:0,30,389	0/0:12,0:12:33.11:0,33,429	0/0:18,0:18:54.16:0,54,685	0/0:7,0:7:21.07:0,21,273	0/0:29,0:29:84.27:0,84,1091	1/1:0,23:23:69.23:1034,69,0	1/1:0,18:18:54.18:809,54,0	1/1:0,1:1:3.01:45,3,0
chr10	24021496	.	CTTT	C	2285.68	PASS	AB=0.657;AC=30;AF=0.536;AN=56;BaseQRankSum=0.713;DP=415;FS=5.462;HRun=18;HaplotypeScore=68.6251;InbreedingCoeff=0.7655;MQ=64.10;MQ0=10;MQRankSum=0.609;QD=9.22;ReadPosRankSum=4.073;VQSLOD=-0.5611;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:26:22.13:0,22,236	0/0:1,0:1:0:0,0,0	0/0:17,0:9:8.68:0,9,69	0/0:9,0:7:5.69:0,6,49	0/1:6,9:18:4.01:142,0,4	1/1:5,9:15:20.29:217,20,0	1/1:7,7:15:19.05:201,19,0	1/1:13,7:21:22.33:211,22,0	1/1:11,2:14:20.59:175,21,0	0/0:10,0:13:14.85:0,15,132	0/0:8,0:12:20.91:0,21,184	1/1:4,7:11:13.42:144,13,0	1/1:3,5:10:16.02:138,16,0	1/1:8,7:15:12.73:141,13,0	0/0:12,0:14:22.99:0,23,284	0/0:13,0:13:36.04:0,36,449	0/1:15,2:22:22.48:22,0,161	0/0:3,0:5:8.91:0,9,73	0/0:17,0:21:20.52:0,21,217	0/0:15,0:23:38:0,38,416	0/0:3,1:9:6.83:0,7,43	1/1:2,5:8:7.33:85,7,0	1/1:8,7:17:11.36:138,11,0	1/1:4,10:14:20.84:206,21,0	1/1:5,9:17:15.42:145,15,0	1/1:4,10:15:25.13:250,25,0	1/1:11,9:20:17.18:175,17,0	1/1:8,3:9:10.91:102,11,0
chr10	24023032	.	T	TTG	1128.05	PASS	AB=1.000;AC=14;AF=0.250;AN=56;BaseQRankSum=-2.152;DP=504;FS=9.792;HRun=0;HaplotypeScore=81.4612;InbreedingCoeff=0.7427;MQ=60.82;MQ0=7;MQRankSum=1.095;QD=8.29;ReadPosRankSum=-0.005;VQSLOD=2.4993;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:19:44.92:0,45,418	0/1:8,0:8:8.02:8,0,57	1/1:22,0:11:8.99:78,9,0	0/0:13,0:6:11.36:0,11,86	0/0:28,0:28:18.47:0,18,182	0/0:26,0:26:13.42:0,13,85	0/0:20,0:18:23.87:0,24,191	0/0:31,0:31:47.96:0,48,414	0/0:22,0:21:13.95:0,14,92	0/0:18,0:17:29.63:0,30,287	0/0:13,0:13:27.04:0,27,281	0/0:24,0:24:29.80:0,30,220	0/0:25,0:25:44.10:0,44,315	0/1:21,0:21:2.47:2,0,50	1/1:13,0:13:15.04:208,15,0	1/1:16,0:16:12:168,12,0	0/0:11,0:10:20.74:0,21,198	0/0:6,0:5:14.67:0,15,103	0/0:10,0:10:14.98:0,15,143	0/0:9,0:9:20.97:0,21,190	0/0:13,0:12:12.02:0,12,123	0/0:17,0:16:26.82:0,27,197	0/0:21,0:21:22.46:0,22,212	0/0:16,0:16:5.99:0,6,48	0/0:25,0:25:14.95:0,15,119	1/1:11,16:26:48.06:602,48,0	1/1:7,14:20:4.40:92,4,0	1/1:2,6:8:9.03:142,9,0
chr10	24023051	.	TGA	T	1801.86	PASS	AB=1.000;AC=26;AF=0.500;AN=52;BaseQRankSum=1.607;DP=501;FS=19.945;HRun=0;HaplotypeScore=74.6472;InbreedingCoeff=0.7128;MQ=49.85;MQ0=29;MQRankSum=-1.342;QD=6.01;ReadPosRankSum=0.439;VQSLOD=1.3350;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:22:11.88:12,0,256	1/1:4,4:8:5.91:71,6,0	0/0:15,0:4:2.92:0,3,17	./.	1/1:0,29:29:35.57:246,36,0	1/1:3,25:26:11.99:119,12,0	1/1:8,14:20:11.65:88,12,0	1/1:14,9:21:22.89:181,23,0	1/1:3,18:19:14.07:147,14,0	0/1:23,0:20:31.46:31,0,181	0/0:14,0:12:16.57:0,17,218	1/1:5,18:22:18.01:187,18,0	1/1:24,2:24:31.59:279,32,0	1/1:2,15:17:8.94:74,9,0	0/0:13,0:12:9.49:0,9,101	0/0:18,0:14:10.25:0,10,90	0/0:13,0:11:15.02:0,15,184	0/0:10,0:7:11.93:0,12,83	0/0:10,0:9:20.23:0,20,170	0/0:10,0:8:9.03:0,9,131	0/0:13,0:10:11.92:0,12,137	1/1:12,2:12:23.84:255,24,0	1/1:17,4:21:25.44:276,25,0	./.	1/1:4,17:21:3.01:34,3,0	0/0:26,0:25:46.78:0,47,366	0/0:21,0:19:16.76:0,17,101	0/0:8,0:8:8.65:0,9,50
chr10	24023070	.	AAGAGAGAG	A	41.99	PASS	AB=0.965;AC=9;AF=0.250;AN=36;BaseQRankSum=-1.799;DP=428;FS=0.000;HRun=0;HaplotypeScore=97.5937;InbreedingCoeff=0.0189;MQ=44.71;MQ0=40;MQRankSum=1.167;QD=0.42;ReadPosRankSum=0.486;VQSLOD=1.6984;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:15:2.90:0,3,16	0/1:6,0:6:0:0,0,0	./.	./.	./.	./.	1/1:20,0:16:0.47:1,0,0	./.	./.	0/1:15,4:17:25.16:25,0,87	0/0:11,1:10:0:0,0,0	./.	0/0:20,0:18:12.01:0,12,146	./.	0/0:14,0:13:3.01:0,3,77	0/0:23,0:18:2.22:0,2,7	0/1:12,0:10:47.90:48,0,54	0/0:11,0:7:3.01:0,3,94	0/1:16,0:15:18.69:19,0,35	1/1:8,2:7:3.01:39,3,0	0/0:13,0:9:3.01:0,3,56	0/0:12,0:10:0:0,0,0	0/0:17,0:17:3.01:0,3,45	./.	./.	0/1:18,0:16:4.97:5,0,143	0/0:15,0:12:11.80:0,12,116	0/0:8,0:6:2.47:0,2,19
chr10	24023111	.	AGGGAGG	A	489.40	PASS	AB=1.000;AC=16;AF=0.348;AN=46;BaseQRankSum=-2.641;DP=264;FS=45.220;HRun=0;HaplotypeScore=50.9138;InbreedingCoeff=0.2639;MQ=30.87;MQ0=52;MQRankSum=-0.880;QD=3.55;ReadPosRankSum=2.664;VQSLOD=0.1017;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:3,0:2:0.47:0,0,1	./.	./.	./.	0/1:13,0:13:0:1,0,0	0/0:19,0:14:2.70:0,3,7	./.	1/1:4,8:12:21.89:249,22,0	0/0:16,0:9:0:0,0,0	0/1:8,0:7:1.69:2,0,63	0/1:3,0:1:0:0,0,0	0/0:11,0:11:0:0,0,0	0/1:21,0:19:33.34:35,0,33	0/1:8,0:5:0:1,0,0	0/0:8,0:6:7.26:0,7,78	0/1:4,0:1:0:0,0,0	0/0:8,0:4:9.41:0,9,89	0/0:6,0:2:3.01:0,3,36	1/1:9,0:7:5.76:37,6,0	0/0:9,0:5:8.88:0,9,68	0/0:11,0:3:8.92:0,9,96	./.	0/1:19,0:18:0:0,0,0	0/0:12,0:8:0.05:0,0,0	0/1:11,0:11:0.10:0,0,0	0/1:10,0:6:34.65:96,0,35	0/1:10,0:8:22.05:39,0,22	1/1:10,0:4:12.04:143,12,0
chr10	24023121	.	GGAGGGAGGGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA	G	1224.09	PASS	AB=0.919;AC=22;AF=0.458;AN=48;BaseQRankSum=1.577;DP=220;FS=6.652;HRun=0;HaplotypeScore=127.0294;InbreedingCoeff=0.3367;MQ=31.33;MQ0=47;MQRankSum=-0.381;QD=9.14;ReadPosRankSum=-2.556;VQSLOD=0.7050;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:3:2.13:0,2,4	1/1:1,0:1:3.01:52,3,0	./.	./.	1/1:12,0:11:9.03:170,9,0	1/1:11,0:6:4.97:192,5,0	./.	1/1:17,0:17:8.30:193,8,0	1/1:13,0:8:15:309,15,0	0/1:8,0:6:17.95:18,0,319	./.	1/1:8,0:8:11.78:190,12,0	0/1:10,0:8:28.32:115,0,28	0/1:3,0:2:0:0,0,0	0/0:8,0:7:10.85:0,11,59	0/0:5,0:1:1.25:0,1,3	0/0:8,0:4:8.11:0,8,44	0/0:5,0:2:3.01:0,3,48	0/0:8,0:7:11.87:0,12,225	0/0:7,0:5:6.45:0,6,115	0/0:15,0:6:8.92:0,9,99	0/0:2,10:11:1.82:0,2,5	0/1:1,16:16:0.21:0,0,0	1/1:11,0:8:2.49:57,2,0	1/1:7,0:7:2.71:41,3,0	0/0:8,0:5:12.04:0,12,216	0/1:8,0:6:4.24:4,0,59	0/1:8,0:4:28.69:29,0,189
chr10	24023800	.	TTCC	T	9477.06	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=14.775;DP=783;FS=5.973;HRun=0;HaplotypeScore=127.1407;InbreedingCoeff=0.9957;MQ=63.64;MQ0=5;MQRankSum=2.712;QD=24.87;ReadPosRankSum=5.586;VQSLOD=4.5804;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:71.21:0,71,1296	1/1:1,8:8:21.07:305,21,0	0/0:30,0:20:20.95:0,21,280	0/0:29,0:18:38.93:0,39,623	1/1:9,32:41:78.05:1010,78,0	1/1:7,27:33:69.23:1004,69,0	1/1:1,25:26:32.64:754,33,0	1/1:22,12:32:33.06:416,33,0	1/1:5,32:36:66.11:952,66,0	0/0:34,0:34:90.29:0,90,1738	0/0:22,0:22:60.19:0,60,1143	1/1:5,35:39:63.21:916,63,0	1/1:3,25:28:54.18:779,54,0	1/1:6,20:26:24.08:349,24,0	0/0:34,0:34:84.27:0,84,1665	0/0:34,0:34:81.24:0,81,1493	0/0:28,0:27:60.15:0,60,1120	0/0:11,0:11:14.15:0,14,452	0/0:18,0:16:36.10:0,36,633	0/0:33,0:33:90.28:0,90,1742	0/0:22,0:22:51.13:0,51,893	1/1:1,28:29:60.07:802,60,0	1/1:4,19:23:42.14:611,42,0	1/1:4,23:27:48.03:697,48,0	1/1:4,23:27:62.57:881,63,0	0/0:33,0:32:78.26:0,78,1541	0/0:34,0:34:90.24:0,90,1648	0/0:11,0:11:27.07:0,27,481
chr10	24026121	.	AT	A	9097.07	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=12.940;DP=539;FS=4.600;HRun=5;HaplotypeScore=66.3429;InbreedingCoeff=0.9973;MQ=90.38;MQ0=0;MQRankSum=-5.098;QD=29.63;ReadPosRankSum=3.769;VQSLOD=5.4639;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:93.30:0,93,1256	1/1:0,10:10:27.08:306,27,0	0/0:25,0:25:43.26:0,43,643	0/0:20,0:20:54.14:0,54,693	1/1:1,21:22:63.18:712,63,0	1/1:0,27:27:66.19:749,66,0	1/1:0,16:16:39.11:442,39,0	1/1:4,30:34:90.23:1003,90,0	1/1:0,13:13:33.09:374,33,0	0/0:17,0:17:48.16:0,48,655	0/0:15,0:15:42.14:0,42,574	1/1:0,16:16:42.12:476,42,0	1/1:1,23:24:57.16:647,57,0	1/1:3,21:24:60.17:681,60,0	0/0:17,0:17:48.16:0,48,657	0/0:17,0:17:51.17:0,51,695	0/0:22,0:22:60.20:0,60,819	0/0:11,0:11:30.10:0,30,405	0/0:22,0:22:60.18:0,60,779	0/0:19,0:19:57.19:0,57,780	0/0:15,0:15:45.12:0,45,596	1/1:0,13:13:39.11:440,39,0	1/1:1,14:15:42.12:476,42,0	1/1:0,14:14:36.10:408,36,0	1/1:2,11:13:27.08:306,27,0	1/1:0,26:26:78.22:885,78,0	1/1:1,33:34:90.26:1021,90,0	1/1:1,5:6:15.04:170,15,0
chr10	24027903	.	C	CTGTGTGTGTGTGTGTGTGTGTG	7572.05	PASS	AB=1.000;AC=31;AF=0.554;AN=56;BaseQRankSum=6.990;DP=641;FS=9.323;HRun=0;HaplotypeScore=333.4925;InbreedingCoeff=0.6183;MQ=57.64;MQ0=9;MQRankSum=-6.460;QD=23.89;ReadPosRankSum=-2.439;VQSLOD=1.2906;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:33:23.63:0,24,2262	1/1:2,0:8:3.01:247,3,0	0/0:48,0:25:15.04:0,15,324	0/0:52,0:31:3.67:0,4,108	1/1:20,0:20:4.53:96,5,0	1/1:26,0:25:18.04:890,18,0	1/1:16,0:16:21.07:1612,21,0	1/1:26,0:23:27.08:904,27,0	1/1:26,0:24:17.92:468,18,0	0/0:24,0:25:39.12:0,39,1620	0/0:14,0:14:27.09:0,27,1328	1/1:20,0:20:9.03:332,9,0	1/1:15,0:15:12.04:443,12,0	1/1:8,12:20:3.48:280,3,0	0/0:24,0:24:54.18:0,54,2325	0/0:22,0:23:56.79:0,57,2664	0/1:26,0:26:29.92:30,0,1975	0/0:11,0:12:20.64:0,21,911	0/0:20,0:22:33.08:0,33,1117	0/0:28,0:31:72.23:0,72,3053	0/0:37,0:39:70.86:0,71,2987	1/1:16,0:16:3.01:112,3,0	1/1:23,0:23:9.02:223,9,0	0/1:17,0:17:99:120,0,137	1/1:3,5:11:6.02:581,6,0	0/1:18,0:16:99:740,0,138	1/1:22,0:21:20.93:451,21,0	1/1:6,0:5:5.53:41,6,0
chr10	24028220	.	T	TAC	5051.84	PASS	AB=1.000;AC=48;AF=0.857;AN=56;BaseQRankSum=4.879;DP=530;FS=4.161;HRun=0;HaplotypeScore=120.9228;InbreedingCoeff=0.6288;MQ=71.09;MQ0=10;MQRankSum=-5.885;QD=10.96;ReadPosRankSum=1.930;VQSLOD=4.5561;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:35,0:34:36.13:275,36,0	1/1:4,0:4:5.90:37,6,0	0/0:31,0:20:28.66:0,29,269	0/1:22,0:17:1.05:1,0,102	1/1:23,0:23:35.87:286,36,0	1/1:19,1:20:34.98:275,35,0	1/1:15,0:15:17.98:171,18,0	1/1:39,0:38:77.59:613,78,0	1/1:13,0:13:2.94:18,3,0	1/1:17,0:17:17.97:283,18,0	1/1:12,0:12:12.02:72,12,0	1/1:17,0:17:4.10:177,4,0	1/1:26,0:25:60.66:465,61,0	1/1:24,0:24:32.63:247,33,0	0/0:18,0:18:44.98:0,45,405	0/0:20,0:20:42.01:0,42,402	1/1:19,0:19:20.58:130,21,0	1/1:9,0:8:11.83:85,12,0	1/1:23,0:23:55.08:441,55,0	1/1:28,0:28:15.36:255,15,0	1/1:21,0:21:26.96:238,27,0	0/1:7,0:7:12.86:40,0,13	1/1:11,0:11:11.92:91,12,0	1/1:6,9:15:3.01:49,3,0	1/1:22,0:20:35:282,35,0	1/1:14,0:14:26.54:174,27,0	1/1:21,0:20:35.66:282,36,0	1/1:4,0:4:8.92:64,9,0
chr10	24028232	.	CAGAGAGAGAG	C	1058.73	PASS	AB=0.923;AC=11;AF=0.229;AN=48;BaseQRankSum=1.788;DP=528;FS=2.052;HRun=0;HaplotypeScore=170.1628;InbreedingCoeff=0.4512;MQ=56.88;MQ0=12;MQRankSum=-1.497;QD=8.68;ReadPosRankSum=1.077;VQSLOD=2.8440;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,15:34:0.94:0,1,1	./.	./.	./.	0/0:22,0:22:20.99:0,21,239	0/0:20,0:22:6.41:0,6,43	0/0:17,0:17:6.82:0,7,99	0/0:36,0:35:19.33:0,19,223	0/0:1,0:21:2.92:0,3,17	0/1:14,2:15:0.79:256,0,1	1/1:4,7:11:8.96:197,9,0	0/0:9,0:19:3.01:0,3,30	0/0:25,0:26:39.53:0,40,701	0/0:14,0:29:12:0,12,256	0/0:23,0:23:25.02:0,25,938	0/0:17,0:18:25.33:0,25,961	1/1:12,7:19:9.02:187,9,0	0/1:8,0:7:32.09:57,0,32	0/1:19,3:22:10.27:242,0,10	1/1:11,12:24:14.42:172,14,0	1/1:21,0:21:5.96:92,6,0	./.	0/0:10,0:9:2.66:0,3,120	0/0:13,0:13:3.01:0,3,137	0/0:23,0:22:8.95:0,9,168	0/0:16,0:15:18.02:0,18,474	0/0:20,0:19:12.04:0,12,371	0/0:4,0:4:3.90:0,4,90
chr10	24028677	.	T	TGAG	17139.88	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=-15.033;DP=468;FS=2.095;HRun=0;HaplotypeScore=59.1283;InbreedingCoeff=0.9946;MQ=73.60;MQ0=0;MQRankSum=-2.802;QD=58.10;ReadPosRankSum=1.670;VQSLOD=6.6879;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:33.09:0,33,523	1/1:0,9:9:24.08:553,24,0	0/0:8,0:8:21.06:0,21,325	0/0:12,0:12:29.94:0,30,467	1/1:1,24:26:69.24:1572,69,0	1/1:0,22:22:60.21:1381,60,0	1/1:2,9:11:27.09:613,27,0	1/1:2,21:24:63.16:1208,63,0	1/1:2,7:9:18.06:414,18,0	0/0:19,0:19:54.18:0,54,916	0/0:23,0:23:69.21:0,69,1125	1/1:0,19:20:57.20:1299,57,0	1/1:0,30:30:87.30:2004,87,0	1/1:3,16:19:48.16:1062,48,0	0/0:17,0:17:48.16:0,48,813	0/0:15,0:15:42.14:0,42,716	0/0:17,0:17:51.16:0,51,841	0/0:9,0:9:27.09:0,27,460	0/0:13,0:13:39.12:0,39,611	0/0:21,0:21:63.20:0,63,1048	0/0:7,0:7:21.07:0,21,358	1/1:0,13:14:27.09:622,27,0	1/1:0,22:23:45.15:1037,45,0	1/1:0,14:14:30.10:692,30,0	1/1:1,18:19:54.19:1236,54,0	1/1:0,27:27:78.21:1736,78,0	1/1:1,22:23:60.21:1367,60,0	1/1:0,5:5:15.05:345,15,0
chr10	24030023	.	A	AAC	194.01	PASS	AB=0.889;AC=3;AF=0.054;AN=56;BaseQRankSum=-2.638;DP=599;FS=17.397;HRun=0;HaplotypeScore=142.9492;InbreedingCoeff=-0.0396;MQ=64.22;MQ0=4;MQRankSum=-1.140;QD=2.62;ReadPosRankSum=-1.614;VQSLOD=1.5968;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:24:0.86:1,0,250	0/0:8,0:8:13.55:0,14,57	0/0:25,0:15:3.01:0,3,34	0/1:30,0:25:8.75:9,0,59	0/0:17,0:17:16.07:0,16,65	0/0:31,0:31:26.37:0,26,182	0/0:23,0:23:24.29:0,24,105	0/0:29,0:29:9.45:0,9,86	0/0:19,0:19:8.81:0,9,88	0/0:13,0:13:23.86:0,24,252	0/0:22,0:23:41.95:0,42,457	0/0:23,0:23:32.30:0,32,134	0/0:21,0:21:40.66:0,41,172	0/0:11,0:10:13.39:0,13,55	0/0:20,0:20:42.08:0,42,457	0/0:18,0:19:53.97:0,54,585	0/0:17,0:17:9.43:0,9,257	0/1:9,8:18:13.53:267,0,14	0/0:16,0:16:17.17:0,17,153	0/0:26,0:25:31:0,31,457	0/0:31,0:33:43.51:0,44,712	0/0:28,0:28:29.46:0,29,120	0/0:21,0:21:25.72:0,26,132	0/0:22,0:22:31.97:0,32,129	0/0:20,0:20:29.53:0,30,121	0/0:22,0:22:34.35:0,34,207	0/0:33,0:32:44.82:0,45,214	0/0:4,0:4:5.68:0,6,28
chr10	24030045	.	CACACACAA	C	2639.85	PASS	AB=0.881;AC=7;AF=0.125;AN=56;BaseQRankSum=-0.071;DP=620;FS=7.871;HRun=0;HaplotypeScore=195.4547;InbreedingCoeff=0.1686;MQ=60.96;MQ0=3;MQRankSum=-5.432;QD=18.72;ReadPosRankSum=-1.648;VQSLOD=1.5192;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:27:69.18:0,69,1938	0/0:9,0:9:14.92:0,15,227	0/0:26,0:11:23.14:0,23,498	0/0:24,0:15:39.87:0,40,824	0/0:19,0:19:24.06:0,24,386	0/0:27,0:27:76.16:0,76,1299	0/0:24,0:24:2.53:0,3,673	0/1:36,0:36:99:211,0,817	0/1:22,0:22:11.24:11,0,884	0/0:16,0:16:41.34:0,41,1219	0/0:21,0:21:62.91:0,63,1976	0/0:22,0:22:45.02:0,45,739	0/0:22,0:22:24.02:0,24,691	0/0:18,0:17:21.05:0,21,328	0/0:22,0:22:63.19:0,63,2070	0/0:23,0:23:69.21:0,69,2467	0/0:14,0:14:39.10:0,39,1337	0/0:17,0:17:38.96:0,39,1054	0/0:19,0:19:51.12:0,51,1141	0/0:24,0:23:64.09:0,64,2348	0/0:38,0:38:99:0,103,3504	0/0:24,0:24:36.12:0,36,644	0/0:22,0:22:18.80:0,19,501	0/1:28,0:27:33.78:34,0,737	0/0:20,0:20:36.12:0,36,598	0/1:9,10:18:99:974,0,310	1/1:6,24:29:48.16:1347,48,0	0/1:4,2:6:15.66:198,0,16
chr10	24030049	.	CACAA	C	2562.30	PASS	AB=0.947;AC=23;AF=0.411;AN=56;BaseQRankSum=9.534;DP=617;FS=3.295;HRun=0;HaplotypeScore=155.5005;InbreedingCoeff=0.4629;MQ=64.52;MQ0=3;MQRankSum=-2.955;QD=8.60;ReadPosRankSum=1.442;VQSLOD=2.8011;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:69.06:0,69,1102	1/1:9,1:10:2.31:55,2,0	0/0:25,0:13:32.11:0,32,441	0/0:23,0:15:41.97:0,42,579	0/0:17,0:17:0.94:0,1,3	0/1:24,3:27:33.08:197,0,33	0/1:22,2:24:3.87:211,0,4	1/1:33,2:35:32.34:548,32,0	0/1:22,0:22:4.72:102,0,5	0/0:15,0:15:41.33:0,41,732	0/0:25,0:25:74.89:0,75,1332	1/1:20,1:21:0.24:51,0,0	0/1:19,2:21:15.66:136,0,16	1/1:18,0:18:2.54:7,3,0	0/0:21,0:21:60.16:0,60,1230	0/0:25,0:25:75.18:0,75,1545	0/0:16,0:16:42.08:0,42,869	0/0:18,0:18:44.87:0,45,594	0/0:18,0:18:29.17:0,29,587	0/0:25,0:24:64.51:0,65,1355	0/0:37,0:37:99:0,100,2066	0/0:25,0:25:6.24:0,6,25	1/1:22,2:24:0.95:117,1,0	1/1:27,0:26:3.88:144,4,0	1/1:18,1:19:4.09:26,4,0	0/1:19,0:18:99:436,0,159	1/1:25,0:24:48.15:570,48,0	1/1:6,0:6:14.97:139,15,0
chr10	24030051	.	CAA	C	7879.14	PASS	AB=1.000;AC=31;AF=0.554;AN=56;BaseQRankSum=13.080;DP=615;FS=3.350;HRun=3;HaplotypeScore=115.7930;InbreedingCoeff=0.9033;MQ=66.94;MQ0=3;MQRankSum=-1.705;QD=23.45;ReadPosRankSum=3.745;VQSLOD=3.2845;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:35.78:0,36,724	1/1:1,9:10:15.02:205,15,0	0/0:28,0:16:41.04:0,41,473	0/0:22,0:15:41.45:0,41,441	1/1:1,15:16:18.06:274,18,0	1/1:11,13:24:38.98:713,39,0	1/1:17,7:24:31.41:622,31,0	1/1:3,32:35:96.21:949,96,0	1/1:12,11:23:57.01:672,57,0	0/0:14,0:14:41.11:0,41,565	0/0:25,0:25:67.62:0,68,999	1/1:2,18:20:36.10:526,36,0	1/1:3,17:20:47.82:627,48,0	1/1:0,16:16:15.05:228,15,0	0/0:20,0:20:60.13:0,60,899	0/0:26,0:26:70.89:0,71,1151	0/0:15,0:15:42.06:0,42,641	0/0:18,0:18:44.79:0,45,400	0/0:17,0:17:43.35:0,43,493	0/0:25,1:25:5.32:0,5,910	0/0:39,0:39:77.82:0,78,1519	1/1:1,24:25:36.01:519,36,0	1/1:4,19:24:35.97:451,36,0	1/1:16,10:26:63.07:784,63,0	1/1:1,18:19:36.04:518,36,0	0/1:22,0:21:99:336,0,100	1/1:25,0:24:47.69:344,48,0	1/1:7,0:7:14.93:112,15,0
chr10	24030422	.	G	GTTT	12413	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=-6.313;DP=557;FS=7.867;HRun=8;HaplotypeScore=81.8523;InbreedingCoeff=0.9936;MQ=78.23;MQ0=0;MQRankSum=-2.285;QD=39.79;ReadPosRankSum=-1.074;VQSLOD=4.0020;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:36.07:0,36,455	1/1:0,8:8:24.08:485,24,0	0/0:16,0:16:30.06:0,30,385	0/0:14,0:14:42.10:0,42,523	1/1:7,20:29:69.19:1258,69,0	1/1:2,12:16:33.11:649,33,0	1/1:1,9:10:27.09:523,27,0	1/1:8,22:31:66.21:1260,66,0	1/1:3,18:23:20.75:1057,21,0	0/0:31,0:31:84.25:0,84,1103	0/0:25,0:26:73.78:0,74,967	1/1:3,13:17:36.10:690,36,0	1/1:4,6:15:24.03:374,24,0	1/1:1,17:19:51.18:1030,51,0	0/0:19,0:19:54.16:0,54,695	0/0:28,0:28:75.19:0,75,956	0/0:21,0:21:63.20:0,63,828	0/0:9,0:9:27.09:0,27,353	0/0:23,0:23:57.14:0,57,749	0/0:34,0:34:96.29:0,96,1247	0/0:11,0:11:30.10:0,30,394	1/1:4,22:28:75.23:1412,75,0	1/1:4,16:21:51.17:1009,51,0	1/1:0,5:6:12.04:225,12,0	1/1:4,21:27:69.24:1337,69,0	1/1:2,0:19:50.20:377,50,0	1/1:7,1:34:65.03:525,65,0	1/1:1,1:9:22.19:201,22,0
chr10	24031934	.	C	CAAACAAAACAAAACAAAACATAA	53803.54	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=8.360;DP=811;FS=2.676;HRun=0;HaplotypeScore=456.4965;InbreedingCoeff=0.9974;MQ=63.17;MQ0=1;MQRankSum=-17.839;QD=109.80;ReadPosRankSum=1.194;VQSLOD=3.9111;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:88.98:0,89,4686	1/1:12,0:12:30.02:1158,30,0	0/0:30,0:29:63.35:0,63,1325	0/0:19,0:19:38.83:0,39,893	1/1:43,2:45:99:4140,110,0	1/1:25,0:25:60.01:2615,60,0	1/1:23,0:23:63.15:2431,63,0	1/1:43,0:43:99:3386,117,0	1/1:33,0:33:75.07:3088,75,0	0/0:36,0:36:99:0,102,3473	0/0:31,0:31:81.15:0,81,2943	1/1:25,1:26:69.20:3545,69,0	1/1:33,3:36:99:4966,99,0	1/1:25,0:25:53.22:3453,53,0	0/0:28,0:27:81.22:0,81,3475	0/0:23,0:23:63.17:0,63,2552	0/0:21,0:21:54.10:0,54,2000	0/0:11,0:11:26.92:0,27,1158	0/0:20,0:20:51.11:0,51,1373	0/0:31,0:31:90.16:0,90,3134	0/0:26,0:25:69.16:0,69,2699	1/1:35,0:35:99:4394,99,0	1/1:36,0:36:94.47:3814,94,0	1/1:17,1:18:38.95:752,39,0	1/1:27,0:27:78.21:3759,78,0	1/1:43,1:44:99:6086,123,0	1/1:42,1:43:99:5155,124,0	1/1:4,11:19:14.79:1063,15,0
chr10	24031962	.	A	AT	5363.08	PASS	AB=0.779;AC=16;AF=0.286;AN=56;BaseQRankSum=11.045;DP=811;FS=26.913;HRun=0;HaplotypeScore=196.0928;InbreedingCoeff=-0.3954;MQ=52.61;MQ0=0;MQRankSum=-11.607;QD=11.46;ReadPosRankSum=-1.097;VQSLOD=3.5140;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,132,1827	0/1:9,4:13:99:151,0,298	0/0:30,0:24:72.22:0,72,976	0/0:24,0:23:63.10:0,63,804	0/1:29,14:43:99:513,0,538	0/1:19,5:24:99:179,0,529	0/1:15,5:21:99:192,0,526	0/1:35,7:43:99:275,0,1072	0/1:25,9:34:99:347,0,594	0/0:32,0:32:96.32:0,96,1329	0/0:33,0:33:96.30:0,96,1309	0/1:15,12:27:99:488,0,453	0/1:27,8:35:99:315,0,852	0/1:19,9:28:99:270,0,634	0/0:28,0:27:81.24:0,81,1087	0/0:27,0:27:81.26:0,81,1116	0/0:23,0:23:66.22:0,66,920	0/0:15,0:15:45.12:0,45,603	0/0:26,0:26:75.25:0,75,1035	0/0:25,0:25:69.23:0,69,965	0/0:35,0:35:99:0,102,1408	0/1:22,13:35:99:510,0,736	0/1:21,12:33:99:457,0,701	0/1:10,2:12:31.46:31,0,152	0/1:19,12:31:99:475,0,662	0/1:29,11:40:99:413,0,967	0/1:22,18:40:99:740,0,632	0/1:8,0:9:8.21:8,0,163
chr10	24032009	.	T	TATCTGTAA	37031.34	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=-9.781;DP=733;FS=26.954;HRun=0;HaplotypeScore=179.6379;InbreedingCoeff=0.9992;MQ=80.83;MQ0=1;MQRankSum=-21.012;QD=97.71;ReadPosRankSum=0.312;VQSLOD=3.5916;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,147,4133	1/1:5,8:13:33.07:1231,33,0	0/0:26,0:26:75.25:0,75,1972	0/0:33,0:33:92.80:0,93,2453	1/1:9,29:40:90.69:3522,91,0	1/1:5,20:25:60.16:2527,60,0	1/1:5,9:16:36.12:1515,36,0	1/1:5,14:23:63.20:2328,63,0	1/1:6,22:28:54.15:2264,54,0	0/0:30,0:30:90.30:0,90,2545	0/0:35,0:35:99:0,102,2827	1/1:4,20:24:63.17:2721,63,0	1/1:5,29:35:87.30:3716,87,0	1/1:3,18:21:57.20:2511,57,0	0/0:24,0:24:72.25:0,72,2059	0/0:27,0:27:81.28:0,81,2298	0/0:27,0:27:78.27:0,78,2172	0/0:15,0:15:45.14:0,45,1183	0/0:20,0:20:60.21:0,60,1725	0/0:28,0:28:84.29:0,84,2437	0/0:39,0:39:99:0,117,3405	1/1:10,20:31:81.19:3156,81,0	1/1:5,24:30:78.22:3085,78,0	1/1:2,8:12:21.07:805,21,0	1/1:3,16:20:54.19:2361,54,0	1/1:8,0:24:63.21:2122,63,0	1/1:1,0:25:66.23:2574,66,0	1/1:8,0:10:26.98:594,27,0
chr10	24034882	.	TG	T	9618.63	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=11.114;DP=669;FS=2.978;HRun=2;HaplotypeScore=125.9282;InbreedingCoeff=0.9983;MQ=80.54;MQ0=0;MQRankSum=-8.926;QD=33.87;ReadPosRankSum=0.430;VQSLOD=4.3815;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:63.21:0,63,943	1/1:0,14:14:39.13:502,39,0	0/0:44,0:40:84.19:0,84,1145	0/0:53,3:49:73.51:0,74,1167	1/1:0,20:20:44.63:543,45,0	1/1:0,26:26:75.24:973,75,0	1/1:2,21:23:60.19:778,60,0	1/1:0,32:32:96.27:1203,96,0	1/1:0,24:24:63.12:795,63,0	0/0:34,0:34:99:0,99,1466	0/0:20,0:20:60.20:0,60,899	1/1:0,17:17:48.16:622,48,0	1/1:2,24:26:72.78:885,73,0	1/1:0,23:23:63.20:817,63,0	0/0:29,0:29:87.27:0,87,1280	0/0:24,0:24:72.23:0,72,1045	0/0:18,0:18:51.17:0,51,763	0/0:9,0:9:21.03:0,21,289	0/0:17,0:17:51.15:0,51,727	0/0:22,0:22:66.21:0,66,967	0/0:30,0:30:87.26:0,87,1256	1/1:1,21:22:57.12:717,57,0	1/1:0,18:18:48:578,48,0	1/1:0,16:16:33.11:427,33,0	1/1:1,22:23:60.20:778,60,0	0/0:28,0:28:77.58:0,78,1103	0/0:18,0:18:54.01:0,54,751	0/0:11,0:11:18.03:0,18,244
chr10	24034913	.	T	TTTTCTC	5717.22	PASS	AB=1.000;AC=32;AF=0.571;AN=56;BaseQRankSum=9.904;DP=641;FS=7.167;HRun=0;HaplotypeScore=197.7396;InbreedingCoeff=0.8326;MQ=59.88;MQ0=15;MQRankSum=-6.448;QD=18.27;ReadPosRankSum=-3.539;VQSLOD=3.2943;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:27:61.11:61,0,144	1/1:10,1:11:23.89:236,24,0	0/0:47,0:25:37.76:0,38,534	0/0:57,0:27:33.29:0,33,404	1/1:20,1:20:26.80:200,27,0	1/1:13,0:13:26.74:313,27,0	1/1:18,0:18:29.82:262,30,0	1/1:39,0:34:77.86:755,78,0	1/1:18,1:19:38.27:409,38,0	0/0:32,0:32:86.57:0,87,1319	0/0:18,0:18:42.08:0,42,710	1/1:14,0:14:24.76:310,25,0	1/1:24,0:24:66.88:865,67,0	1/1:19,0:19:50.82:499,51,0	0/0:28,0:28:75.06:0,75,1144	0/0:30,0:30:84.18:0,84,1409	0/0:26,0:26:69.07:0,69,1201	0/0:7,0:6:8.96:0,9,111	0/0:21,0:21:50.98:0,51,657	0/0:24,0:25:64.92:0,65,1057	0/0:37,0:37:72.18:0,72,1364	1/1:16,0:16:20.90:225,21,0	1/1:15,0:14:21.36:167,21,0	1/1:13,0:13:15.36:111,15,0	1/1:20,1:21:55.24:495,55,0	0/1:20,0:20:44.45:382,0,44	1/1:14,0:14:34.18:303,34,0	1/1:3,6:8:8.36:125,8,0
chr10	24034917	.	C	CTCTT	5595.23	PASS	AB=1.000;AC=32;AF=0.571;AN=56;BaseQRankSum=9.696;DP=681;FS=6.865;HRun=0;HaplotypeScore=199.3249;InbreedingCoeff=0.7447;MQ=55.82;MQ0=16;MQRankSum=-7.192;QD=15.16;ReadPosRankSum=-4.077;VQSLOD=3.1757;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:28:99:217,0,104	1/1:11,0:11:23.89:218,24,0	0/0:43,0:21:37.76:0,38,492	0/0:54,0:24:32.36:0,32,377	1/1:25,1:25:28.61:242,29,0	1/1:12,1:13:24.57:291,25,0	1/1:19,1:19:29.23:243,29,0	1/1:45,0:40:98.66:815,99,0	1/1:22,0:22:44.68:446,45,0	0/0:31,0:31:89.54:0,90,1194	0/0:20,0:20:48.09:0,48,673	1/1:16,0:16:33.60:335,34,0	1/1:26,0:26:62:708,62,0	1/1:24,0:22:50.65:455,51,0	0/0:29,0:29:77.99:0,78,1089	0/0:31,0:31:84.01:0,84,1186	0/0:26,0:26:66.10:0,66,992	0/1:7,0:6:7.24:7,0,88	0/0:16,0:16:48.08:0,48,585	0/0:27,0:27:65.22:0,65,933	0/0:35,0:35:62.02:0,62,1207	1/1:19,1:17:19.72:204,20,0	1/1:20,0:18:14.29:157,14,0	1/1:16,1:16:15.09:111,15,0	1/1:25,0:24:53.69:466,54,0	0/1:24,0:22:50.57:332,0,51	1/1:15,0:15:34.14:276,34,0	0/1:10,0:9:1.12:72,0,1
chr10	24034919	.	C	CTT	4290.95	PASS	AB=0.907;AC=28;AF=0.500;AN=56;BaseQRankSum=9.210;DP=683;FS=0.355;HRun=1;HaplotypeScore=181.2221;InbreedingCoeff=0.7106;MQ=54.31;MQ0=16;MQRankSum=-6.758;QD=12.81;ReadPosRankSum=-3.476;VQSLOD=0.4062;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:10.68:0,11,114	1/1:10,0:10:23.89:200,24,0	0/0:42,0:20:37.42:0,37,437	0/0:52,0:22:33.72:0,34,350	1/1:29,1:29:22.84:194,23,0	1/1:14,0:14:26.94:259,27,0	1/1:20,0:19:31.84:232,32,0	0/1:44,0:39:79.84:549,0,80	1/1:22,0:22:41.61:364,42,0	0/0:32,0:32:89.88:0,90,1048	0/0:20,0:20:51.04:0,51,598	1/1:14,1:15:5.92:171,6,0	1/1:26,1:27:34.20:505,34,0	1/1:25,1:24:32.96:393,33,0	0/0:28,0:28:84.05:0,84,993	0/0:31,0:31:79.53:0,80,955	0/0:26,0:26:71.93:0,72,823	0/0:7,0:6:8.96:0,9,88	0/0:17,0:17:48.05:0,48,522	0/0:29,0:29:48.30:0,48,768	0/0:37,0:37:83.68:0,84,1038	1/1:19,0:16:20.90:187,21,0	1/1:18,1:17:20.83:166,21,0	0/1:17,0:16:2.24:93,0,2	1/1:24,0:23:53.09:443,53,0	0/1:9,13:20:71.17:257,0,71	1/1:15,0:15:27.29:251,27,0	0/1:11,0:10:28.38:28,0,31
chr10	24034942	.	TCACACA	T	2609.84	PASS	AB=0.925;AC=22;AF=0.423;AN=52;BaseQRankSum=3.374;DP=599;FS=31.335;HRun=0;HaplotypeScore=200.3092;InbreedingCoeff=0.6200;MQ=45.53;MQ0=13;MQRankSum=-1.135;QD=9.39;ReadPosRankSum=-5.355;VQSLOD=-0.1845;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:38.40:0,38,790	1/1:12,0:12:18.06:365,18,0	./.	./.	1/1:22,2:24:12.18:163,12,0	1/1:15,0:15:5.71:125,6,0	1/1:18,1:18:8.68:178,9,0	1/1:33,5:31:19.70:403,20,0	1/1:19,0:21:16.26:221,16,0	0/0:26,0:25:54.06:0,54,1120	0/0:19,0:19:39.52:0,40,962	1/1:19,0:24:20.28:348,20,0	0/1:19,2:22:18.89:199,0,19	0/1:19,1:19:11.68:162,0,12	0/0:29,0:29:63.65:0,64,1676	0/0:29,0:29:59.13:0,59,1189	0/0:31,0:31:75.19:0,75,1787	0/0:5,0:4:6.02:0,6,158	0/0:18,0:15:30.01:0,30,507	0/0:26,0:26:48.24:0,48,1098	0/0:40,0:41:81.33:0,81,1609	1/1:21,0:19:12.01:266,12,0	1/1:18,0:16:6.93:139,7,0	0/1:21,0:21:60.09:100,0,60	0/1:18,1:18:7.50:134,0,7	0/0:15,0:13:28.01:0,28,343	0/0:11,0:11:14.92:0,15,128	0/0:9,0:8:7.98:0,8,216
chr10	24035102	.	TTG	T	60.45	PASS	AB=0.894;AC=4;AF=0.071;AN=56;BaseQRankSum=6.379;DP=757;FS=23.183;HRun=0;HaplotypeScore=172.4464;InbreedingCoeff=-0.0793;MQ=57.36;MQ0=17;MQRankSum=-3.551;QD=0.93;ReadPosRankSum=-1.140;VQSLOD=1.1620;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:35:52.51:0,53,1477	0/1:12,0:12:31.26:31,0,105	0/0:60,0:32:61.91:0,62,1192	0/0:76,0:32:16.07:0,16,795	0/0:25,1:26:39.40:0,39,597	0/0:21,1:22:24.25:0,24,576	0/0:17,0:17:20.98:0,21,258	0/0:27,0:26:72.15:0,72,1067	0/0:22,0:22:34.77:0,35,263	0/0:36,0:36:99:0,99,1847	0/0:19,0:19:51.05:0,51,834	0/0:21,0:21:47.68:0,48,426	0/0:24,0:24:65.64:0,66,685	0/0:21,0:20:21.18:0,21,305	0/0:36,0:36:49.94:0,50,1663	0/0:30,0:30:81.14:0,81,1420	0/0:35,0:34:99:0,99,1613	0/0:12,0:12:1.36:0,1,384	0/0:31,0:29:72.28:0,72,1145	0/0:24,0:24:69:0,69,1146	0/0:37,1:38:86.74:0,87,1668	0/0:22,1:22:41.54:0,42,575	0/0:16,0:16:29.86:0,30,351	0/1:19,5:24:50.66:51,0,308	0/0:21,0:21:45.82:0,46,545	0/1:20,0:20:2.66:3,0,606	0/0:18,0:18:29.40:0,29,361	0/1:6,3:8:77.46:77,0,125
chr10	24035104	.	GCTCTCT	G	5365.09	PASS	AB=0.722;AC=24;AF=0.429;AN=56;BaseQRankSum=4.850;DP=756;FS=21.322;HRun=0;HaplotypeScore=198.4988;InbreedingCoeff=0.6159;MQ=56.63;MQ0=17;MQRankSum=-7.051;QD=16.92;ReadPosRankSum=-4.149;VQSLOD=2.5252;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:37:60.12:0,60,1671	0/1:4,9:13:39.41:295,0,39	0/0:57,0:30:20.66:0,21,405	0/0:76,0:31:14.55:0,15,216	1/1:14,9:25:21.37:367,21,0	0/1:13,8:22:2.25:330,0,2	0/1:10,9:19:0:0,0,0	1/1:26,1:25:15.05:301,15,0	1/1:4,17:22:12.93:254,13,0	0/0:32,0:35:71.50:0,72,1878	0/0:18,0:19:29.77:0,30,759	1/1:13,7:20:29.93:578,30,0	1/1:15,8:25:42.14:809,42,0	1/1:12,7:19:18.06:307,18,0	0/0:33,0:37:80.82:0,81,2090	0/0:26,0:30:60.20:0,60,1583	0/0:32,0:34:69.21:0,69,1819	0/0:11,0:12:24.04:0,24,551	0/0:25,0:27:45.13:0,45,876	0/0:21,0:24:51.17:0,51,1457	0/0:37,0:37:19.43:0,19,2118	1/1:15,6:22:25.33:424,25,0	1/1:5,9:16:6.02:126,6,0	0/1:23,1:24:9.61:104,0,10	1/1:12,7:21:18.88:325,19,0	0/1:15,6:21:99:482,0,182	0/1:7,11:19:27.08:664,0,27	0/0:9,0:8:13.29:0,13,191
chr10	24035136	.	G	GCA	1629.30	PASS	AB=0.810;AC=6;AF=0.107;AN=56;BaseQRankSum=4.035;DP=719;FS=10.839;HRun=0;HaplotypeScore=172.7080;InbreedingCoeff=0.6720;MQ=50.07;MQ0=16;MQRankSum=-5.755;QD=26.28;ReadPosRankSum=1.661;VQSLOD=4.4770;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:57.36:0,57,885	0/0:14,0:14:13.04:0,13,220	0/0:55,0:17:20.27:0,20,234	0/0:44,0:24:38.60:0,39,496	0/0:22,0:22:26.86:0,27,341	0/0:23,0:23:36.11:0,36,458	0/0:13,0:13:12.04:0,12,152	0/0:37,0:35:78.17:0,78,982	0/0:29,0:29:24.08:0,24,302	0/0:33,0:33:81.18:0,81,978	0/0:15,0:15:41.99:0,42,494	0/0:18,0:18:30.10:0,30,378	0/0:24,0:24:51.16:0,51,641	0/0:21,0:20:27.03:0,27,322	0/0:43,0:43:93.90:0,94,1203	0/0:29,0:29:69.22:0,69,862	0/0:32,0:30:72.19:0,72,879	0/1:12,0:12:5.94:6,0,281	0/0:28,0:24:54.16:0,54,670	0/0:26,0:26:57.18:0,57,719	0/0:37,0:36:84.22:0,84,1029	0/0:20,0:20:39.12:0,39,486	0/0:18,0:18:15.05:0,15,189	0/0:16,0:16:9.65:0,10,182	0/0:18,0:18:14.99:0,15,189	0/1:7,11:18:3.68:479,0,4	1/1:4,23:27:66.70:1073,67,0	1/1:1,4:5:12.04:199,12,0
chr10	24035210	.	ATGCTCTCT	A	17316.18	PASS	AB=0.551;AC=30;AF=0.536;AN=56;BaseQRankSum=14.388;DP=819;FS=27.401;HRun=0;HaplotypeScore=239.9209;InbreedingCoeff=0.8391;MQ=73.22;MQ0=2;MQRankSum=-16.272;QD=44.17;ReadPosRankSum=2.130;VQSLOD=3.3254;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,108,4364	1/1:3,9:11:24.08:649,24,0	0/0:51,0:38:53.26:0,53,1787	0/0:75,0:57:25.34:0,25,2063	1/1:4,17:21:32.90:771,33,0	1/1:7,28:35:81.26:2133,81,0	1/1:5,18:23:15.05:406,15,0	1/1:11,27:36:75.10:1615,75,0	1/1:4,20:24:27.09:688,27,0	0/0:33,0:33:99:0,99,3768	0/0:17,0:17:45.15:0,45,1784	1/1:5,31:36:60.02:1599,60,0	1/1:5,30:35:72.25:1945,72,0	1/1:3,26:29:54.19:1460,54,0	0/0:45,0:45:99:0,129,5200	0/0:40,0:40:99:0,114,4584	0/0:24,0:24:63.21:0,63,2429	0/0:15,0:15:42.14:0,42,1739	0/0:22,0:22:57.20:0,57,2196	0/0:26,0:26:69.24:0,69,2889	0/0:36,0:36:87.30:0,87,3549	1/1:1,11:12:24.08:649,24,0	1/1:4,20:24:36.04:973,36,0	0/1:6,19:25:95.47:462,0,95	0/1:3,21:23:81.79:929,0,82	1/1:1,20:21:57.20:1531,57,0	1/1:4,25:29:51.17:1380,51,0	1/1:2,2:4:6.02:125,6,0
chr10	24035218	.	TTG	T	2416.52	PASS	AB=1.000;AC=26;AF=0.464;AN=56;BaseQRankSum=17.272;DP=784;FS=25.232;HRun=0;HaplotypeScore=206.7897;InbreedingCoeff=0.5674;MQ=75.64;MQ0=2;MQRankSum=-16.531;QD=6.98;ReadPosRankSum=5.079;VQSLOD=1.8376;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,123,2364	0/1:10,0:10:20.43:81,0,20	0/0:52,1:42:42.89:0,43,1461	0/0:72,3:56:58.20:0,58,1639	0/1:20,0:20:89.26:95,0,89	1/1:35,0:35:46.47:358,46,0	1/1:18,0:18:13.99:67,14,0	0/1:30,0:28:99:217,0,235	0/1:20,0:20:2.76:81,0,3	0/0:38,0:38:99:0,114,2185	0/0:19,0:19:54.19:0,54,1058	1/1:31,0:31:55.99:272,56,0	1/1:31,0:31:67.04:316,67,0	1/1:26,0:26:50.36:239,50,0	0/0:44,0:44:99:0,132,2625	0/0:42,0:42:99:0,126,2479	0/0:23,0:23:66.01:0,66,1262	0/0:15,0:15:45.15:0,45,883	0/0:23,0:23:69.24:0,69,1381	0/0:27,0:27:81.28:0,81,1592	0/0:35,0:35:93.32:0,93,1866	1/1:11,0:11:22.38:107,22,0	1/1:20,0:20:33.57:159,34,0	0/1:23,0:23:39.81:56,0,40	0/1:22,0:21:23.16:118,0,23	1/1:21,0:21:8.19:198,8,0	1/1:25,0:25:47.61:227,48,0	1/1:3,0:3:5.78:35,6,0
chr10	24037201	.	AG	A	3128.65	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.201;DP=739;FS=4.682;HRun=1;HaplotypeScore=72.0555;InbreedingCoeff=0.9994;MQ=81.22;MQ0=0;MQRankSum=-0.963;QD=38.63;ReadPosRankSum=2.752;VQSLOD=4.4565;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,135,2043	0/0:15,0:15:45.15:0,45,702	0/0:33,0:33:99:0,99,1489	0/0:35,0:35:85:0,85,1512	0/0:39,0:39:99:0,114,1709	0/0:12,0:12:36.11:0,36,540	0/0:27,0:27:81.26:0,81,1244	0/0:24,0:24:72.22:0,72,1067	0/0:27,0:27:81.26:0,81,1245	0/0:32,0:32:96.31:0,96,1461	0/0:18,0:18:54.13:0,54,774	0/0:31,0:31:93.30:0,93,1431	0/0:31,0:31:93.30:0,93,1432	0/0:24,0:24:72.22:0,72,1080	0/0:9,0:9:27.06:0,27,397	0/0:28,0:28:81.26:0,81,1238	0/0:23,0:23:69.21:0,69,1053	0/0:23,0:23:69.23:0,69,1066	0/0:26,0:26:72.24:0,72,1115	0/0:28,0:28:84.27:0,84,1290	0/0:28,0:28:84.22:0,84,1285	0/0:30,0:30:90.21:0,90,1292	0/0:25,0:25:72.23:0,72,1103	0/0:21,0:21:63.21:0,63,986	0/0:23,0:23:69.23:0,69,1080	1/1:0,31:31:93.31:1300,93,0	1/1:0,39:39:99:1552,111,0	1/1:0,11:11:30.10:419,30,0
chr10	24038295	.	C	CA	5906.30	PASS	AB=0.739;AC=26;AF=0.464;AN=56;BaseQRankSum=-11.606;DP=617;FS=2.900;HRun=10;HaplotypeScore=76.7069;InbreedingCoeff=0.8636;MQ=67.61;MQ0=2;MQRankSum=1.992;QD=19.82;ReadPosRankSum=-1.500;VQSLOD=5.1761;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:31:50.92:0,51,150	1/1:5,11:17:35.92:366,36,0	0/0:22,0:13:25.54:0,26,169	0/1:13,0:10:5.88:44,0,6	1/1:6,30:36:64.57:850,65,0	1/1:2,19:21:54.13:573,54,0	1/1:3,15:18:20.45:414,20,0	1/1:7,23:30:34.67:607,35,0	0/1:2,10:12:2.86:171,0,3	0/0:27,0:28:79.94:0,80,646	0/0:24,1:25:20.22:0,20,384	1/1:2,8:10:13.35:157,13,0	1/1:4,15:19:11.53:326,12,0	1/1:1,12:13:15.04:160,15,0	0/0:18,1:19:21.94:0,22,384	0/0:16,0:16:41.95:0,42,345	0/0:33,0:33:83.85:0,84,685	0/0:22,0:22:59.92:0,60,492	0/0:16,0:16:35.93:0,36,293	0/0:35,0:36:91.91:0,92,745	0/0:9,0:9:17.96:0,18,148	1/1:6,19:25:4.81:450,5,0	1/1:10,35:45:28.36:917,28,0	1/1:1,14:15:39.10:416,39,0	1/1:3,19:22:23.48:455,23,0	0/0:6,0:26:45.71:0,46,169	0/0:2,0:22:36.66:0,37,106	0/0:4,0:14:20.36:0,20,59
chr10	24038391	.	TA	T	374.61	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=5.540;DP=475;FS=1.645;HRun=11;HaplotypeScore=51.7495;InbreedingCoeff=0.5907;MQ=66.62;MQ0=0;MQRankSum=-1.732;QD=12.08;ReadPosRankSum=-0.431;VQSLOD=2.9252;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,17:21:56.91:465,57,0	0/0:9,0:9:24.05:0,24,248	0/0:11,0:7:11.23:0,11,86	0/1:10,0:8:13.56:14,0,23	0/0:18,1:20:26.32:0,26,469	0/0:15,0:15:36.09:0,36,384	0/0:9,0:9:27.02:0,27,275	0/0:30,0:31:72.01:0,72,750	0/0:14,0:14:33.08:0,33,352	0/0:21,0:22:45.11:0,45,474	0/0:20,0:20:54.12:0,54,567	0/0:9,0:9:18.05:0,18,192	0/0:21,0:21:53.99:0,54,552	0/0:17,0:17:36.08:0,36,378	0/0:20,0:20:48.12:0,48,512	0/0:20,1:21:29.48:0,29,511	0/0:28,0:28:75.19:0,75,797	0/0:20,0:20:51.13:0,51,541	0/0:14,0:15:18.57:0,19,346	0/0:30,0:30:64.40:0,64,669	0/0:9,0:9:18.05:0,18,192	0/0:17,0:17:36.09:0,36,380	0/0:16,0:16:33.08:0,33,347	0/0:4,0:4:9.02:0,9,96	0/0:20,0:20:26.43:0,26,473	0/0:19,1:20:21.43:0,21,416	0/0:19,1:20:29.48:0,29,511	0/0:6,0:6:12.03:0,12,128
chr10	24039092	.	AT	A	1096.65	PASS	AB=0.583;AC=7;AF=0.130;AN=54;BaseQRankSum=8.744;DP=449;FS=12.543;HRun=8;HaplotypeScore=43.4718;InbreedingCoeff=0.8304;MQ=70.41;MQ0=0;MQRankSum=-0.102;QD=17.14;ReadPosRankSum=1.064;VQSLOD=2.1233;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,21:24:57.09:550,57,0	0/0:5,0:5:15.05:0,15,181	0/0:8,0:7:17.81:0,18,156	0/0:9,0:8:5.85:0,6,45	0/0:31,0:31:90.24:0,90,1052	0/0:16,0:16:45.14:0,45,544	0/0:12,0:12:27.06:0,27,303	0/0:26,0:26:75.20:0,75,878	0/0:4,0:5:14.90:0,15,150	0/0:14,0:14:39.11:0,39,462	0/0:31,0:31:90.26:0,90,1075	0/0:15,0:15:42.11:0,42,495	0/0:17,0:17:42.13:0,42,507	0/0:18,0:18:51.14:0,51,605	0/0:14,0:14:39.11:0,39,459	0/0:16,1:17:36.30:0,36,478	0/0:33,0:33:78.18:0,78,912	0/0:15,0:15:36.07:0,36,418	0/0:28,0:28:72.20:0,72,849	0/0:26,0:26:72.20:0,72,848	0/0:5,0:5:12.04:0,12,145	./.	0/0:13,0:13:33.09:0,33,387	0/0:5,0:5:15.05:0,15,181	0/0:22,0:22:57.15:0,57,659	0/1:4,10:14:3.19:257,0,3	1/1:2,20:22:32.97:318,33,0	1/1:0,4:4:12.02:116,12,0
chr10	24039353	.	A	AG	18474.90	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-10.536;DP=531;FS=4.455;HRun=0;HaplotypeScore=44.7453;InbreedingCoeff=0.9741;MQ=81.30;MQ0=0;MQRankSum=-4.548;QD=40.08;ReadPosRankSum=3.117;VQSLOD=5.1190;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,16:16:39.13:588,39,0	1/1:0,5:5:11.96:155,12,0	0/0:15,0:15:38.27:0,38,510	0/0:12,0:12:36.05:0,36,435	1/1:0,34:34:87.08:1230,87,0	1/1:1,24:25:63.21:964,63,0	1/1:1,23:24:60.20:918,60,0	1/1:0,31:31:87.25:1266,87,0	1/1:0,18:18:39.13:597,39,0	1/1:2,23:25:72.21:1059,72,0	1/1:0,20:20:51:723,51,0	1/1:0,26:26:78.26:1194,78,0	1/1:1,15:16:42.14:637,42,0	1/1:1,15:16:45.15:689,45,0	0/0:24,0:24:69.21:0,69,919	0/0:19,0:19:54.16:0,54,724	1/1:0,10:10:30.10:459,30,0	1/1:0,14:14:36.12:549,36,0	1/1:2,16:18:48.14:711,48,0	1/1:0,31:31:93.31:1407,93,0	1/1:0,21:21:57.19:872,57,0	1/1:0,5:5:12.04:184,12,0	1/1:0,15:15:42.14:643,42,0	1/1:1,11:12:30.10:459,30,0	1/1:0,21:21:60.20:918,60,0	1/1:1,20:21:57.16:831,57,0	1/1:0,31:31:81.28:1239,81,0	1/1:0,6:6:12.04:184,12,0
chr10	24041634	.	C	CTT	6887.62	PASS	AB=0.600;AC=43;AF=0.768;AN=56;BaseQRankSum=-2.802;DP=462;FS=5.094;HRun=11;HaplotypeScore=65.1928;InbreedingCoeff=0.6097;MQ=71.49;MQ0=2;MQRankSum=0.168;QD=17.53;ReadPosRankSum=-0.941;VQSLOD=3.4289;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:18:35.68:0,36,381	1/1:3,2:5:3.01:43,3,0	0/0:12,0:11:17.37:0,17,124	0/0:6,0:7:5.21:0,5,36	1/1:5,16:23:44.56:557,45,0	1/1:5,21:27:41.11:539,41,0	1/1:0,7:7:14.96:170,15,0	1/1:15,14:31:50.02:565,50,0	1/1:3,12:16:35.56:463,36,0	1/1:6,1:24:42.69:181,43,0	0/1:7,1:26:39.40:138,0,39	1/1:0,12:13:23.57:313,24,0	1/1:3,11:15:21.06:286,21,0	1/1:1,8:9:15.05:217,15,0	0/0:21,0:21:57.06:0,57,546	0/0:10,0:10:27.03:0,27,262	0/1:1,0:5:16.11:21,0,16	1/1:1,0:12:27.45:94,27,0	1/1:7,0:19:1.85:80,2,0	1/1:3,1:20:3.22:134,3,0	0/1:2,0:6:4.12:9,0,4	1/1:2,19:22:53.75:586,54,0	1/1:3,16:21:29.54:366,30,0	1/1:4,8:12:21.07:304,21,0	1/1:8,19:27:36.08:498,36,0	1/1:3,19:24:56.60:709,57,0	1/1:3,13:17:29.42:352,29,0	1/1:2,9:10:18.06:261,18,0
chr10	24042154	.	GT	G	1194.61	PASS	AB=0.917;AC=10;AF=0.179;AN=56;BaseQRankSum=8.213;DP=480;FS=0.000;HRun=11;HaplotypeScore=51.6352;InbreedingCoeff=0.7060;MQ=71.39;MQ0=0;MQRankSum=-2.016;QD=12.57;ReadPosRankSum=-0.239;VQSLOD=2.9434;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,8:11:20.95:172,21,0	0/1:4,1:5:9.60:10,0,113	0/0:16,0:12:13.20:0,13,116	0/1:11,0:9:6.24:6,0,75	0/0:25,1:26:41.48:0,41,622	0/0:16,1:17:17.46:0,17,391	0/0:10,0:10:21.03:0,21,214	0/0:27,1:28:35.47:0,35,576	0/0:14,0:14:32.96:0,33,316	0/0:19,0:19:45.07:0,45,455	0/0:20,0:20:45.10:0,45,472	0/0:23,0:23:63.14:0,63,664	0/0:15,1:17:20.27:0,20,390	0/0:13,0:13:36.07:0,36,369	0/0:22,0:22:51.11:0,51,530	0/0:16,1:17:20.47:0,20,423	0/0:13,1:15:5.38:0,5,244	0/0:13,0:13:30.04:0,30,308	0/0:12,1:12:2.41:0,2,224	0/0:14,1:16:17.26:0,17,348	0/0:8,0:8:24.03:0,24,240	0/0:21,1:24:10.76:0,11,455	0/0:18,0:19:54:0,54,558	0/0:15,0:15:36.04:0,36,370	0/0:19,1:20:26.49:0,26,487	1/1:6,22:28:65.84:535,66,0	1/1:5,24:29:53.78:443,54,0	1/1:0,11:11:23.92:192,24,0
chr10	24042876	.	C	CTCTTTG	2918.95	PASS	AB=0.563;AC=5;AF=0.089;AN=56;BaseQRankSum=-2.439;DP=555;FS=0.000;HRun=0;HaplotypeScore=113.6891;InbreedingCoeff=0.7508;MQ=80.87;MQ0=0;MQRankSum=-7.421;QD=78.89;ReadPosRankSum=-0.295;VQSLOD=3.9808;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:63.19:0,63,1530	0/0:8,0:8:24.08:0,24,615	0/0:16,0:16:36.12:0,36,909	0/0:14,0:14:39.13:0,39,966	0/0:23,0:23:69.24:0,69,1769	0/0:25,0:25:75.24:0,75,1862	0/0:22,0:22:63.22:0,63,1605	0/0:38,0:38:99:0,111,2602	0/0:16,0:16:48.15:0,48,1151	0/0:29,0:29:84.28:0,84,1995	0/0:26,0:26:78.27:0,78,1995	0/0:35,0:35:99:0,102,2587	0/0:21,0:21:63.22:0,63,1609	0/0:19,0:19:57.20:0,57,1460	0/0:22,0:22:63.22:0,63,1597	0/0:19,0:19:54.16:0,54,1225	0/0:19,0:19:57.17:0,57,1392	0/0:8,0:8:24.08:0,24,609	0/0:18,0:18:54.19:0,54,1351	0/0:24,0:24:72.21:0,72,1631	0/0:20,0:20:60.21:0,60,1503	0/0:18,0:18:54.17:0,54,1319	0/0:20,0:20:60.21:0,60,1512	0/0:20,0:20:60.21:0,60,1474	0/0:17,0:17:51.16:0,51,1253	0/1:4,10:18:22.67:1538,0,23	1/1:3,9:16:33.01:1166,33,0	1/1:0,3:3:9.03:338,9,0
chr10	24043021	.	GCACACACACACA	G	585.23	PASS	AB=0.913;AC=5;AF=0.096;AN=52;BaseQRankSum=4.336;DP=510;FS=9.935;HRun=0;HaplotypeScore=178.6602;InbreedingCoeff=0.4987;MQ=65.11;MQ0=14;MQRankSum=-3.144;QD=13.61;ReadPosRankSum=-1.607;VQSLOD=1.8106;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:26:33.11:0,33,918	0/0:7,0:7:8.56:0,9,346	./.	./.	0/0:27,0:27:25.89:0,26,829	0/0:23,0:23:26.83:0,27,996	0/0:19,0:18:15.05:0,15,568	0/0:18,0:18:24.07:0,24,528	0/0:15,0:15:10.56:0,11,244	0/0:22,0:22:32.47:0,32,911	0/0:11,0:11:9.56:0,10,493	0/0:20,0:19:17.78:0,18,691	0/0:12,0:12:7.36:0,7,188	0/0:22,0:22:26.89:0,27,1120	0/0:15,0:15:15.05:0,15,599	0/0:8,0:9:21.07:0,21,847	0/0:18,0:24:15.05:0,15,503	0/0:12,0:12:15.05:0,15,382	0/0:10,0:10:7.27:0,7,243	0/0:16,0:16:17.62:0,18,704	0/0:43,0:41:48.16:0,48,1759	0/0:10,0:10:6.02:0,6,204	0/0:12,0:11:7.75:0,8,399	0/0:21,0:28:9.03:0,9,377	0/0:20,0:20:12.04:0,12,398	0/1:19,2:19:16.26:218,0,16	1/1:11,7:17:15.05:456,15,0	1/1:4,0:4:2.99:24,3,0
chr10	24043037	.	A	ACACACACA	3917.07	PASS	AB=1.000;AC=40;AF=0.800;AN=50;BaseQRankSum=-4.837;DP=509;FS=6.200;HRun=0;HaplotypeScore=130.5402;InbreedingCoeff=0.4582;MQ=51.46;MQ0=20;MQRankSum=1.657;QD=9.67;ReadPosRankSum=-0.795;VQSLOD=2.1016;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:35,0:34:51.03:51,0,74	1/1:6,0:6:8.80:180,9,0	./.	./.	1/1:25,0:25:11.94:178,12,0	1/1:21,0:21:23.97:425,24,0	1/1:19,0:18:12.03:158,12,0	1/1:19,0:18:11.17:33,11,0	1/1:12,0:12:2.78:46,3,0	1/1:18,0:18:25.01:358,25,0	1/1:10,0:11:8.14:131,8,0	1/1:18,0:17:14.94:215,15,0	1/1:10,8:19:3.85:122,4,0	1/1:19,0:19:22.95:340,23,0	0/0:12,0:12:6.01:0,6,104	0/0:10,0:10:11.23:0,11,141	0/1:26,0:26:4.49:157,0,4	1/1:15,0:15:8.15:138,8,0	1/1:9,0:7:6.02:110,6,0	1/1:12,0:12:11.61:182,12,0	1/1:40,0:37:33.09:589,33,0	1/1:13,0:13:3.01:50,3,0	1/1:16,0:15:8.28:143,8,0	1/1:30,0:30:2.76:24,3,0	1/1:22,0:22:12.03:287,12,0	0/0:23,0:20:6.02:0,6,89	0/0:15,0:14:6.18:0,6,159	./.
chr10	24045844	.	G	GT	216.84	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=-2.826;DP=548;FS=1.156;HRun=8;HaplotypeScore=79.7971;InbreedingCoeff=0.7236;MQ=81.39;MQ0=2;MQRankSum=-1.299;QD=6.02;ReadPosRankSum=-1.570;VQSLOD=0.4734;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,14:15:27.08:310,27,0	0/0:4,0:4:12.01:0,12,110	0/0:34,0:22:31.45:0,31,243	0/1:21,0:16:2.04:2,0,62	0/0:30,0:30:77.78:0,78,697	0/0:23,0:23:65.12:0,65,554	0/0:15,0:15:42.17:0,42,367	0/0:29,0:29:65.58:0,66,564	0/0:19,0:19:35.99:0,36,328	0/0:18,0:18:44.97:0,45,396	0/0:26,0:26:66:0,66,597	0/0:19,0:19:51.50:0,51,466	0/0:13,0:13:33:0,33,297	0/0:17,0:17:41.98:0,42,370	0/0:20,0:20:57.02:0,57,517	0/0:18,0:18:44.95:0,45,393	0/0:15,0:15:32.96:0,33,290	0/0:13,0:13:36.02:0,36,329	0/0:32,0:32:86.75:0,87,752	0/0:20,0:20:48.01:0,48,435	0/0:13,0:13:32.90:0,33,278	0/0:20,0:20:52.88:0,53,439	0/0:22,0:22:65.12:0,65,554	0/0:6,0:6:14.68:0,15,120	0/0:18,0:18:45.02:0,45,410	0/0:22,0:22:51:0,51,459	0/0:27,0:27:69.01:0,69,625	0/0:19,0:19:54.03:0,54,494
chr10	24046984	.	G	GCA	10235.65	PASS	AB=0.609;AC=19;AF=0.339;AN=56;BaseQRankSum=-14.406;DP=814;FS=1.839;HRun=0;HaplotypeScore=104.5023;InbreedingCoeff=0.2488;MQ=66.57;MQ0=6;MQRankSum=2.068;QD=22.70;ReadPosRankSum=2.382;VQSLOD=5.1535;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:24,36:63:51.16:1195,0,51	0/1:4,9:14:41.43:352,0,41	0/0:34,0:23:10.86:0,11,178	0/0:40,0:27:14.58:0,15,262	0/1:8,18:29:24.30:596,0,24	1/1:9,16:25:2.05:491,2,0	0/1:13,14:28:32.69:430,0,33	0/1:12,10:25:26.32:493,0,26	0/1:14,21:35:6.22:708,0,6	0/0:25,0:26:68.62:0,69,819	0/0:15,0:14:35.83:0,36,393	1/1:9,29:37:30.34:967,30,0	1/1:8,19:28:45.15:715,45,0	0/1:8,31:41:13.96:1200,0,14	0/0:35,0:36:90.11:0,90,1050	0/0:29,1:30:15.39:0,15,648	0/0:25,0:29:65.84:0,66,729	0/0:14,0:17:1.05:0,1,288	0/0:19,0:20:26.91:0,27,300	0/0:26,0:27:69.04:0,69,800	0/0:29,0:30:69.03:0,69,789	1/1:6,19:26:18.41:775,18,0	0/1:9,18:27:4.80:341,0,5	1/1:7,36:46:65.03:1357,65,0	0/1:7,16:25:45.62:615,0,46	0/0:23,0:24:57:0,57,649	0/0:26,0:30:59.51:0,60,628	0/0:4,0:4:8.70:0,9,82
chr10	24048428	.	TA	T	4964.03	PASS	AB=0.950;AC=28;AF=0.500;AN=56;BaseQRankSum=-11.621;DP=458;FS=0.756;HRun=8;HaplotypeScore=75.9741;InbreedingCoeff=0.8864;MQ=72.54;MQ0=0;MQRankSum=1.795;QD=22.06;ReadPosRankSum=-0.074;VQSLOD=5.1465;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:1,0:17:40.18:0,40,204	1/1:0,6:6:15.02:145,15,0	0/1:10,0:11:0.64:1,0,214	0/1:8,1:8:9.92:10,0,137	1/1:0,31:31:90.14:868,90,0	1/1:2,15:17:45.07:435,45,0	1/1:1,13:14:33.05:319,33,0	1/1:4,25:29:75.11:724,75,0	1/1:1,11:12:27.04:261,27,0	0/0:22,0:22:61.49:0,61,378	0/0:23,0:23:62.48:0,62,454	1/1:2,12:14:33.04:319,33,0	1/1:2,8:10:21.03:203,21,0	1/1:0,12:12:30.05:290,30,0	0/0:22,0:22:66.20:0,66,797	0/0:13,0:13:36.10:0,36,424	0/0:20,0:20:50.59:0,51,363	0/0:5,0:5:14.87:0,15,104	0/0:23,0:23:61.82:0,62,387	0/0:14,0:14:41.70:0,42,314	0/0:15,0:15:44.57:0,45,310	1/1:2,9:11:27.04:261,27,0	1/1:0,18:18:48.08:464,48,0	1/1:0,9:9:21.03:203,21,0	1/1:0,22:22:48.08:464,48,0	0/0:16,0:16:44.34:0,44,295	0/0:39,0:39:95.24:0,95,682	0/0:4,0:4:11.91:0,12,85
chr10	24048871	.	T	TTGTCCTATTTGCTA	63106.88	PASS	AB=0.563;AC=47;AF=0.839;AN=56;BaseQRankSum=-4.746;DP=626;FS=1.057;HRun=0;HaplotypeScore=167.6050;InbreedingCoeff=0.8461;MQ=50.72;MQ0=0;MQRankSum=-11.644;QD=113.09;ReadPosRankSum=1.285;VQSLOD=5.0191;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:6,9:27:8.96:2298,0,9	1/1:3,7:10:24.08:1652,24,0	0/0:10,0:9:27.09:0,27,940	0/0:9,0:9:24.08:0,24,665	1/1:12,15:40:69.15:3846,69,0	1/1:6,9:28:33.11:2112,33,0	1/1:3,10:17:36.12:2485,36,0	1/1:15,1:39:93.26:4188,93,0	1/1:5,8:24:36.12:2475,36,0	1/1:16,20:49:99:7020,126,0	1/1:3,9:20:36.12:2156,36,0	1/1:3,8:19:27.09:1832,27,0	1/1:13,12:35:65.77:3861,66,0	1/1:7,6:20:36.12:1963,36,0	0/0:30,0:30:84.25:0,84,2938	0/0:19,0:19:51.18:0,51,1936	1/1:6,5:14:24.08:1657,24,0	1/1:6,3:12:15.05:926,15,0	1/1:11,4:21:54.18:2827,54,0	1/1:13,16:37:75.20:4634,75,0	1/1:6,3:10:18.06:1245,18,0	1/1:5,4:14:21.07:1276,21,0	1/1:7,8:23:36.12:2281,36,0	1/1:8,2:10:9.03:611,9,0	1/1:9,7:19:48.16:2959,48,0	1/1:4,14:26:66.23:4064,66,0	1/1:7,16:38:66.22:4224,66,0	1/1:2,1:4:9.03:516,9,0
chr10	24049521	.	AG	A	1544.45	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=5.505;DP=602;FS=6.546;HRun=4;HaplotypeScore=63.3358;InbreedingCoeff=0.9927;MQ=63.87;MQ0=0;MQRankSum=-0.664;QD=28.60;ReadPosRankSum=-0.986;VQSLOD=2.7249;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:84.26:0,84,1148	0/0:7,0:7:21.07:0,21,293	0/0:31,0:27:73.04:0,73,934	0/0:34,0:31:69.97:0,70,948	0/0:20,0:20:60.20:0,60,840	0/0:14,0:14:42.14:0,42,587	0/0:21,0:21:60.20:0,60,839	0/0:20,0:20:45.10:0,45,591	0/0:25,0:25:69.23:0,69,957	0/0:29,0:29:84.25:0,84,1153	0/0:16,0:16:48.16:0,48,671	0/0:23,0:23:66.22:0,66,923	0/0:22,0:22:66.15:0,66,866	0/0:18,0:18:48.14:0,48,653	0/0:37,0:36:99:0,111,1514	0/0:26,0:26:72.22:0,72,974	0/0:24,0:24:72.24:0,72,1000	0/0:17,0:17:45.15:0,45,625	0/0:17,0:17:45.15:0,45,628	0/0:15,0:15:45.14:0,45,613	0/0:32,0:32:90.28:0,90,1238	0/0:12,0:12:36.12:0,36,498	0/0:18,0:18:45.15:0,45,623	0/0:21,0:21:60.19:0,60,821	0/0:20,0:20:57.17:0,57,776	1/1:2,24:26:33.16:786,33,0	1/1:0,21:21:60.18:720,60,0	1/1:1,6:7:15.05:180,15,0
chr10	24050384	.	T	TA	2786.61	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=-3.782;DP=453;FS=4.363;HRun=9;HaplotypeScore=62.6014;InbreedingCoeff=0.8762;MQ=67.54;MQ0=2;MQRankSum=0.549;QD=18.96;ReadPosRankSum=-0.478;VQSLOD=3.7232;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,1:23:50.02:0,50,422	0/0:7,0:7:17.99:0,18,156	0/1:20,0:13:2.80:3,0,105	0/0:22,0:16:23.37:0,23,196	0/0:23,0:23:62.98:0,63,546	0/0:24,0:24:53.97:0,54,469	0/0:8,0:8:20.97:0,21,178	0/0:20,0:21:55.90:0,56,463	0/0:9,0:9:23.99:0,24,208	1/1:8,18:27:30.91:543,31,0	1/1:0,9:9:27.07:299,27,0	0/0:15,0:15:41.99:0,42,364	0/0:14,0:14:35.99:0,36,313	0/0:16,0:16:41.99:0,42,365	0/0:17,0:17:50.95:0,51,434	0/0:9,0:9:20.99:0,21,182	1/1:3,19:22:22.18:472,22,0	1/1:4,16:20:2.03:479,2,0	1/1:5,15:20:17.94:463,18,0	1/1:2,19:21:57.10:616,57,0	1/1:3,3:6:9.02:100,9,0	0/0:12,0:12:26.99:0,27,234	0/0:7,0:7:14.99:0,15,130	0/0:10,0:10:26.99:0,27,234	0/0:22,0:22:51.44:0,51,440	0/0:18,1:20:11.80:0,12,331	0/0:14,0:14:32.99:0,33,286	0/0:12,0:12:26.97:0,27,234
chr10	24050417	.	CAAAATAAAAT	C	796.77	PASS	AC=2;AF=0.037;AN=54;BaseQRankSum=2.152;DP=452;FS=2.544;HRun=0;HaplotypeScore=165.6409;InbreedingCoeff=0.7073;MQ=71.18;MQ0=3;MQRankSum=-4.385;QD=28.46;ReadPosRankSum=1.338;VQSLOD=3.5025;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:14,14:28:28.93:890,29,0	0/0:10,0:10:18.06:0,18,803	0/0:15,0:9:11.98:0,12,264	0/0:42,0:25:35.08:0,35,944	0/0:27,0:27:54.19:0,54,2502	0/0:23,0:23:57.18:0,57,2654	0/0:8,0:8:24.08:0,24,1029	0/0:40,0:40:93.32:0,93,4199	0/0:8,0:8:18.06:0,18,901	0/0:25,0:25:57.16:0,57,2574	0/0:10,0:10:24.08:0,24,953	0/0:18,0:18:42.14:0,42,1960	0/0:9,0:9:15.05:0,15,753	0/0:14,0:14:27.09:0,27,1236	0/0:11,0:11:24.08:0,24,1211	0/0:7,0:7:15.05:0,15,626	0/0:17,0:17:42.14:0,42,1781	0/0:21,0:21:51.17:0,51,2336	0/0:16,0:16:39.13:0,39,1838	0/0:17,0:17:36.12:0,36,1562	./.	0/0:6,0:6:6.01:0,6,166	0/0:5,0:5:6.02:0,6,260	0/0:3,0:3:6.02:0,6,305	0/0:20,0:20:51.18:0,51,2382	0/0:21,0:21:41.98:0,42,920	0/0:16,0:16:38.97:0,39,932	0/0:14,0:13:33.11:0,33,864
chr10	24050422	.	TAA	T	1682.39	PASS	AB=1.000;AC=7;AF=0.130;AN=54;BaseQRankSum=6.980;DP=437;FS=6.172;HRun=4;HaplotypeScore=87.4251;InbreedingCoeff=0.7902;MQ=70.36;MQ0=3;MQRankSum=-2.953;QD=22.43;ReadPosRankSum=2.034;VQSLOD=1.2540;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:25:58.67:59,0,280	0/0:10,0:10:30.09:0,30,508	0/0:15,0:8:20.39:0,20,271	0/0:39,0:22:42.88:0,43,633	0/0:28,0:28:75.26:0,75,1351	0/0:23,0:23:69.22:0,69,1215	0/0:8,0:8:23.87:0,24,398	0/0:40,0:40:99:0,117,2112	0/0:8,0:8:24.08:0,24,432	0/0:22,0:22:63.22:0,63,1143	0/0:10,0:10:30.10:0,30,526	0/0:18,0:18:51.17:0,51,925	0/0:10,0:10:24.07:0,24,405	0/0:12,0:12:30.09:0,30,533	0/0:9,0:9:27.09:0,27,496	0/0:7,0:7:18.06:0,18,327	0/0:16,0:16:45.10:0,45,764	0/0:21,0:21:57.19:0,57,1039	0/0:17,0:17:48.16:0,48,864	0/0:16,0:16:48.14:0,48,791	./.	0/0:5,0:5:15.04:0,15,207	0/0:5,0:5:15.05:0,15,252	0/0:4,0:4:12.03:0,12,186	0/0:19,0:19:57.18:0,57,1016	1/1:2,18:20:9.55:689,10,0	1/1:1,15:16:42.14:612,42,0	1/1:3,11:13:16.22:465,16,0
chr10	24051391	.	A	AT	4040.45	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=5.054;DP=538;FS=0.789;HRun=7;HaplotypeScore=73.6155;InbreedingCoeff=0.9949;MQ=71.33;MQ0=3;MQRankSum=-0.848;QD=27.12;ReadPosRankSum=-3.088;VQSLOD=3.0594;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,1:12:33.01:307,33,0	0/0:8,0:8:21.02:0,21,198	0/0:20,0:17:20.33:0,20,191	0/0:9,1:8:15.85:0,16,138	0/0:32,0:32:90:0,90,835	0/0:28,0:28:62.31:0,62,723	0/0:14,0:14:36.06:0,36,347	0/0:34,0:34:78.08:0,78,739	0/0:12,0:12:33:0,33,308	1/1:3,27:30:86.94:963,87,0	1/1:6,18:24:50.37:533,50,0	0/0:18,0:18:39.91:0,40,400	0/0:29,0:29:81.12:0,81,777	0/0:19,0:19:39:0,39,360	0/0:16,0:16:45.02:0,45,425	0/0:24,0:24:69.11:0,69,666	1/1:7,6:13:33.06:362,33,0	1/1:2,7:9:23.10:259,23,0	1/1:6,18:24:57.11:648,57,0	1/1:8,16:23:53.96:583,54,0	1/1:5,8:13:33.09:386,33,0	0/0:16,0:16:42.05:0,42,399	0/0:23,0:23:69.01:0,69,642	0/0:12,0:12:33.04:0,33,314	0/0:21,0:21:56.83:0,57,533	0/0:16,0:16:36:0,36,334	0/0:29,0:29:65.98:0,66,583	0/0:8,0:8:21.01:0,21,193
chr10	24051399	.	C	CT	2722.62	PASS	AB=1.000;AC=22;AF=0.393;AN=56;BaseQRankSum=10.638;DP=522;FS=3.390;HRun=11;HaplotypeScore=75.1974;InbreedingCoeff=0.8254;MQ=69.08;MQ0=3;MQRankSum=-3.564;QD=13.28;ReadPosRankSum=-1.237;VQSLOD=3.6089;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:23.46:0,23,106	0/0:9,0:9:23.90:0,24,186	0/1:18,0:15:16.10:16,0,82	0/1:9,0:8:0.78:1,0,83	0/0:29,2:33:16.94:0,17,467	0/0:25,1:27:16.48:0,16,459	0/0:11,0:12:28.92:0,29,215	0/0:30,1:32:25.32:0,25,368	0/0:11,0:12:28.91:0,29,215	1/1:11,17:28:26.68:535,27,0	1/1:8,14:22:43.71:516,44,0	0/0:18,0:18:43.37:0,43,326	0/0:31,0:31:68.70:0,69,531	0/0:14,1:15:2.40:0,2,202	0/0:16,1:17:11.39:0,11,271	0/0:25,0:25:60.63:0,61,467	1/1:5,7:12:7.10:179,7,0	1/1:0,9:9:24.05:242,24,0	1/1:11,10:21:28.07:322,28,0	1/1:4,18:21:47.28:459,47,0	1/1:3,7:12:11.74:212,12,0	0/0:14,0:15:40.88:0,41,308	0/0:21,1:24:30.36:0,30,395	0/0:14,0:14:29.83:0,30,232	0/0:22,0:22:41.89:0,42,306	1/1:15,0:15:30.97:132,31,0	1/1:28,0:28:60.21:270,60,0	1/1:8,0:8:10.98:49,11,0
chr10	24051403	.	T	TTTC	2307.35	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-6.314;DP=527;FS=2.692;HRun=0;HaplotypeScore=101.5660;InbreedingCoeff=0.9716;MQ=71.54;MQ0=3;MQRankSum=-2.432;QD=43.53;ReadPosRankSum=2.155;VQSLOD=5.1564;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:30.05:0,30,374	0/0:9,0:9:27.09:0,27,425	0/0:19,0:16:34.96:0,35,386	0/0:12,0:10:26.29:0,26,293	0/0:33,0:33:95.91:0,96,1318	0/0:27,0:27:78.02:0,78,1182	0/0:12,0:12:36.10:0,36,531	0/0:29,0:29:75.04:0,75,1052	0/0:12,0:12:36.10:0,36,531	0/0:28,0:28:64.64:0,65,487	0/0:22,0:22:46.12:0,46,296	0/0:17,0:17:51.12:0,51,770	0/0:29,0:29:81.17:0,81,1232	0/0:15,0:15:44.95:0,45,616	0/0:17,0:17:50.98:0,51,739	0/0:27,0:27:75.22:0,75,1130	0/0:12,0:12:27.59:0,28,189	0/0:10,0:10:10.31:0,10,96	0/0:21,0:21:52.44:0,52,330	0/0:23,0:22:59.34:0,59,329	0/0:15,0:15:30.57:0,31,244	0/0:15,0:15:45.14:0,45,703	0/0:26,0:26:75.04:0,75,1068	0/0:14,0:14:39.10:0,39,570	0/0:20,0:20:57.15:0,57,811	1/1:0,15:17:51.09:836,51,0	1/1:0,28:31:66.22:1363,66,0	1/1:0,5:5:12.04:248,12,0
chr10	24051624	.	C	CAAAAA	2795.78	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-2.028;DP=569;FS=0.607;HRun=8;HaplotypeScore=130.9597;InbreedingCoeff=0.9444;MQ=71.19;MQ0=0;MQRankSum=-6.972;QD=44.38;ReadPosRankSum=-2.393;VQSLOD=1.0935;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:39.07:0,39,639	0/0:5,0:5:12.03:0,12,199	0/0:16,0:14:25.58:0,26,421	0/0:15,0:10:16.74:0,17,214	0/0:26,0:26:63.18:0,63,1079	0/0:17,0:17:39.06:0,39,641	0/0:12,0:12:33.09:0,33,538	0/0:35,0:35:84.01:0,84,1287	0/0:22,0:22:63.19:0,63,1042	0/0:30,0:30:84.25:0,84,1391	0/0:26,0:26:72.21:0,72,1193	0/0:20,0:20:54.13:0,54,837	0/0:28,0:28:72.16:0,72,1196	0/0:26,0:26:66.17:0,66,1102	0/0:29,0:29:87.24:0,87,1377	0/0:22,0:22:66.23:0,66,1118	0/0:19,0:19:51.10:0,51,810	0/0:17,0:19:44.55:0,45,697	0/0:20,0:20:46.09:0,46,822	0/0:19,0:19:48.12:0,48,794	0/0:10,0:10:30.10:0,30,506	0/0:23,0:23:60.14:0,60,947	0/0:26,0:26:66.16:0,66,1098	0/0:7,0:7:21.07:0,21,360	0/0:18,0:18:51.15:0,51,847	1/1:5,21:26:69.03:1510,69,0	1/1:5,26:33:48.64:1370,49,0	1/1:3,0:3:6:51,6,0
chr10	24052686	.	C	CAT	10840.29	PASS	AB=1.000;AC=41;AF=0.732;AN=56;BaseQRankSum=-8.713;DP=484;FS=4.127;HRun=0;HaplotypeScore=99.0276;InbreedingCoeff=0.8787;MQ=68.07;MQ0=3;MQRankSum=-1.656;QD=29.38;ReadPosRankSum=1.730;VQSLOD=6.7586;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:16:19.89:0,20,98	1/1:1,4:5:15.05:253,15,0	0/0:13,0:8:13.48:0,13,107	0/1:15,0:12:12.21:12,0,49	1/1:10,8:18:21.54:483,22,0	1/1:3,20:23:42.14:706,42,0	1/1:9,8:17:21.07:355,21,0	1/1:5,19:24:63.19:1024,63,0	1/1:3,13:16:24.92:475,25,0	1/1:5,14:19:48.16:802,48,0	1/1:7,8:15:26.87:452,27,0	1/1:2,18:20:32.87:556,33,0	1/1:5,12:17:22.13:426,22,0	1/1:5,18:23:26.49:508,26,0	0/0:21,0:21:60.18:0,60,755	0/0:19,0:19:48.15:0,48,618	1/1:7,18:25:45.20:757,45,0	1/1:1,11:12:27.09:455,27,0	1/1:5,17:21:54.18:900,54,0	1/1:3,17:20:36.10:607,36,0	1/1:4,6:10:21.07:348,21,0	1/1:8,6:13:11.85:202,12,0	1/1:6,12:19:26.90:455,27,0	1/1:2,14:16:27.09:455,27,0	1/1:3,15:17:36.36:608,36,0	0/0:21,0:21:6.54:0,7,632	0/0:18,0:18:33.40:0,33,527	0/0:7,0:7:18.06:0,18,232
chr10	24052707	.	T	TCACA	2948.18	PASS	AB=0.846;AC=32;AF=0.615;AN=52;BaseQRankSum=-2.780;DP=498;FS=0.000;HRun=0;HaplotypeScore=152.0904;InbreedingCoeff=0.6298;MQ=58.68;MQ0=10;MQRankSum=-0.075;QD=9.86;ReadPosRankSum=-1.382;VQSLOD=2.9807;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:14:5.98:0,6,36	1/1:7,0:7:5.72:40,6,0	./.	./.	1/1:8,3:18:9.03:204,9,0	1/1:24,0:23:27:407,27,0	1/1:11,1:13:8.23:168,8,0	1/1:23,0:22:6.49:95,6,0	1/1:13,4:17:17.39:379,17,0	0/0:12,0:18:18.02:0,18,167	0/0:6,0:12:9.46:0,9,84	1/1:14,3:17:12.04:280,12,0	1/1:13,5:22:15.05:310,15,0	1/1:14,3:17:5.81:137,6,0	0/0:22,0:23:27.07:0,27,377	0/0:18,0:18:15.03:0,15,190	0/0:18,0:22:9.46:0,9,85	0/1:14,0:15:5.07:5,0,23	0/0:20,0:23:11.94:0,12,111	0/0:14,0:16:0.47:0,0,1	0/0:10,0:11:3:0,3,28	1/1:9,4:16:2.64:60,3,0	1/1:18,0:17:6.92:106,7,0	1/1:19,0:19:22.32:424,22,0	1/1:17,0:16:17.57:309,18,0	1/1:13,0:16:8.74:77,9,0	1/1:9,0:19:19.21:85,19,0	0/1:10,0:18:44.72:45,0,133
chr10	24053151	.	C	CAT	1720.55	PASS	AB=1.000;AC=7;AF=0.130;AN=54;BaseQRankSum=-3.872;DP=418;FS=2.205;HRun=0;HaplotypeScore=69.0900;InbreedingCoeff=0.7965;MQ=69.60;MQ0=0;MQRankSum=0.393;QD=32.46;ReadPosRankSum=2.512;VQSLOD=5.6371;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:36.12:0,36,471	0/0:8,0:8:17.92:0,18,236	./.	0/1:9,0:7:17.34:17,0,39	0/0:28,0:28:75.23:0,75,969	0/0:20,0:20:48.14:0,48,612	0/0:5,0:5:9.03:0,9,118	0/0:39,0:39:96.30:0,96,1246	0/0:12,0:12:27.09:0,27,354	0/0:27,0:27:66.20:0,66,843	0/0:22,0:22:63.19:0,63,810	0/0:8,0:8:21.07:0,21,270	0/0:10,0:10:27.09:0,27,355	0/0:12,0:12:33.08:0,33,410	0/0:13,0:13:39.13:0,39,512	0/0:16,0:16:39.13:0,39,510	0/0:18,0:18:48.09:0,48,592	0/0:12,0:12:36.12:0,36,469	0/0:22,0:22:57.17:0,57,723	0/0:21,0:21:51.17:0,51,669	0/0:7,0:7:15.04:0,15,182	0/0:4,0:4:9.01:0,9,103	0/0:14,0:14:29.93:0,30,393	0/0:8,0:8:18.06:0,18,236	0/0:17,0:17:41.96:0,42,513	1/1:3,11:14:36.12:617,36,0	1/1:3,14:17:42.14:719,42,0	1/1:1,11:13:30.10:514,30,0
chr10	24053184	.	T	TCAC	591.82	PASS	AB=0.606;AC=19;AF=0.339;AN=56;BaseQRankSum=12.507;DP=482;FS=21.652;HRun=0;HaplotypeScore=102.5503;InbreedingCoeff=-0.1783;MQ=62.47;MQ0=6;MQRankSum=2.167;QD=2.14;ReadPosRankSum=4.981;VQSLOD=0.2220;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:48.12:0,48,754	0/1:1,0:11:23.44:24,0,23	0/0:25,0:8:17.29:0,17,236	0/0:11,0:9:9.63:0,10,178	0/1:7,0:31:58.65:59,0,128	0/1:9,0:20:3.98:4,0,255	0/1:3,0:8:25.25:25,0,67	0/1:16,0:27:1.72:2,0,545	1/1:0,0:12:18.17:52,18,0	0/0:27,0:26:75.24:0,75,1311	0/0:22,0:22:66.19:0,66,1106	0/0:6,0:11:1.90:0,2,229	0/1:4,0:16:25.32:25,0,79	0/1:3,0:12:18.47:47,0,18	0/1:6,0:20:32.06:32,0,143	0/1:3,0:21:64.28:64,0,67	0/0:22,0:22:59.48:0,59,1031	0/0:14,0:14:39.10:0,39,601	0/0:15,0:16:35.69:0,36,560	0/0:24,0:24:63.22:0,63,1158	0/0:13,0:13:36.11:0,36,624	1/1:1,0:9:14.54:42,15,0	0/1:4,0:18:24.46:24,0,59	0/1:3,0:9:5.60:6,0,52	0/1:4,0:20:32.81:33,0,96	0/1:5,2:15:99:157,0,105	0/1:8,0:15:99:112,0,181	0/1:7,0:10:48.55:49,0,126
chr10	24054630	.	C	CATATAT	3619.15	PASS	AB=0.545;AC=25;AF=0.694;AN=36;BaseQRankSum=-4.485;DP=143;FS=10.769;HRun=0;HaplotypeScore=38.7654;InbreedingCoeff=0.4654;MQ=83.55;MQ0=1;MQRankSum=-4.146;QD=44.68;ReadPosRankSum=-3.743;VQSLOD=0.7542;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	1/1:4,1:6:9:219,9,0	0/0:10,0:8:3.46:0,3,34	./.	1/1:2,1:5:6.02:140,6,0	1/1:2,4:6:12.04:403,12,0	./.	1/1:17,14:36:78.21:2007,78,0	./.	1/1:4,0:4:3.01:56,3,0	1/1:1,0:1:3.01:42,3,0	1/1:0,2:2:3.01:101,3,0	./.	1/1:3,0:3:3.01:80,3,0	0/0:3,0:3:9.03:0,9,195	0/0:4,0:4:12.04:0,12,261	1/1:2,0:2:3.01:48,3,0	1/1:2,0:3:6.02:158,6,0	./.	1/1:1,0:1:3.01:42,3,0	./.	./.	./.	./.	1/1:1,3:6:9.03:302,9,0	0/1:1,0:6:0.81:21,0,1	0/0:2,0:6:2.44:0,2,66	0/0:1,0:15:5.18:0,5,16
chr10	24054912	.	AT	A	8237.47	PASS	AB=1.000;AC=44;AF=0.786;AN=56;BaseQRankSum=-4.942;DP=370;FS=0.000;HRun=2;HaplotypeScore=49.4600;InbreedingCoeff=0.8051;MQ=85.67;MQ0=3;MQRankSum=-1.021;QD=29.01;ReadPosRankSum=0.835;VQSLOD=4.2672;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,7:7:21.07:270,21,0	1/1:0,9:9:21.07:271,21,0	0/0:25,0:16:21.92:0,22,301	0/1:22,0:13:2.61:3,0,89	1/1:2,16:18:48:578,48,0	1/1:0,20:20:57.18:734,57,0	1/1:0,6:6:12.04:155,12,0	1/1:1,43:44:99:1519,126,0	1/1:0,6:6:15.05:194,15,0	1/1:0,16:16:48.11:565,48,0	1/1:0,10:10:27.04:329,27,0	1/1:1,9:10:21.07:272,21,0	1/1:0,14:14:33.10:414,33,0	1/1:0,6:6:18.06:233,18,0	0/0:14,0:14:42.09:0,42,530	0/0:11,0:11:33.10:0,33,468	1/1:1,9:10:21.01:250,21,0	1/1:0,6:6:18.06:231,18,0	1/1:0,14:14:42.09:491,42,0	1/1:0,12:12:36.06:446,36,0	1/1:0,8:8:18.06:233,18,0	1/1:0,3:3:9.03:116,9,0	1/1:1,8:9:24.08:310,24,0	1/1:0,4:4:12.04:155,12,0	1/1:0,15:15:36.12:464,36,0	0/1:15,0:15:3.88:4,0,58	0/0:22,0:22:5.63:0,6,149	0/0:14,0:14:35.90:0,36,133
chr10	24056228	.	CTT	C	5885.91	PASS	AB=0.563;AC=27;AF=0.482;AN=56;BaseQRankSum=-4.624;DP=433;FS=6.233;HRun=10;HaplotypeScore=116.9108;InbreedingCoeff=0.8644;MQ=64.23;MQ0=0;MQRankSum=-0.042;QD=27.00;ReadPosRankSum=1.169;VQSLOD=4.3657;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:2,0:6:10.50:0,10,62	1/1:4,12:16:39.09:424,39,0	0/0:19,0:14:23.36:0,23,234	0/0:10,0:7:1.67:0,2,42	1/1:3,31:34:90.23:999,90,0	1/1:2,17:19:54.14:600,54,0	1/1:4,9:12:24.06:267,24,0	1/1:3,22:24:62.94:670,63,0	1/1:1,12:13:33.08:366,33,0	0/0:4,0:20:44.52:0,45,152	0/0:6,0:21:38.13:0,38,149	1/1:5,13:18:45.09:490,45,0	1/1:0,9:9:21.06:234,21,0	1/1:1,14:15:42.11:468,42,0	0/0:22,0:22:63.20:0,63,968	0/0:19,0:19:33.10:0,33,476	0/1:2,1:9:18.05:18,0,27	0/0:0,0:8:19.96:0,20,69	0/0:9,0:22:37.67:0,38,168	0/0:2,0:12:27.17:0,27,92	0/0:1,0:2:2.50:0,2,9	1/1:3,11:14:33.07:365,33,0	1/1:1,16:18:39.05:493,39,0	1/1:0,4:4:12.03:134,12,0	1/1:1,10:11:33.07:357,33,0	0/0:2,0:16:27.52:0,28,112	0/0:3,0:27:65.43:0,65,244	0/0:1,0:10:22.18:0,22,76
chr10	24056273	.	AT	A	9712.99	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=7.055;DP=438;FS=5.832;HRun=8;HaplotypeScore=126.3864;InbreedingCoeff=0.8974;MQ=61.44;MQ0=0;MQRankSum=-9.415;QD=25.03;ReadPosRankSum=1.062;VQSLOD=3.6744;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,5:6:11.97:106,12,0	1/1:2,15:17:47.95:441,48,0	0/0:6,0:6:14.64:0,15,121	0/0:11,0:11:7.53:0,8,85	1/1:7,25:32:71.94:659,72,0	1/1:5,16:21:56.85:502,57,0	1/1:1,7:7:21.02:197,21,0	1/1:5,17:21:60.06:570,60,0	1/1:1,18:19:56.92:511,57,0	1/1:3,18:21:60.09:576,60,0	1/1:3,16:19:50.85:450,51,0	1/1:0,17:17:50.92:461,51,0	1/1:1,17:18:47.97:443,48,0	1/1:1,12:13:36.01:337,36,0	0/0:25,0:25:75.21:0,75,885	0/0:8,0:8:21.05:0,21,242	1/1:1,8:9:18.55:219,19,0	1/1:2,7:9:24.04:231,24,0	1/1:6,13:19:47.56:443,48,0	1/1:2,13:15:39:364,39,0	1/1:2,1:3:8.89:65,9,0	1/1:0,9:9:26.96:248,27,0	1/1:1,22:23:65.91:603,66,0	1/1:1,1:2:3:29,3,0	1/1:2,17:19:50.91:459,51,0	1/1:3,16:19:57.08:542,57,0	1/1:7,32:39:99:996,108,0	1/1:2,7:9:27.04:260,27,0
chr10	24056291	.	TAAG	T	14171.15	PASS	AB=1.000;AC=49;AF=0.875;AN=56;BaseQRankSum=7.793;DP=421;FS=9.274;HRun=0;HaplotypeScore=118.7403;InbreedingCoeff=0.7809;MQ=56.78;MQ0=0;MQRankSum=-8.686;QD=37.19;ReadPosRankSum=-0.108;VQSLOD=5.5612;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,4:6:6.02:96,6,0	1/1:4,13:17:39.09:596,39,0	0/1:4,0:4:2.82:3,0,5	0/0:8,0:8:18.03:0,18,322	1/1:2,24:26:57.19:915,57,0	1/1:5,15:20:45.15:723,45,0	1/1:1,5:5:12.04:193,12,0	1/1:7,14:20:45.14:699,45,0	1/1:1,17:18:48.16:771,48,0	1/1:4,17:21:54.18:865,54,0	1/1:1,18:19:54.18:854,54,0	1/1:1,20:21:51.17:818,51,0	1/1:3,15:18:48.16:771,48,0	1/1:2,10:12:27.09:434,27,0	0/0:26,0:26:78.27:0,78,1702	0/0:6,0:6:15.05:0,15,322	1/1:6,3:9:15.01:202,15,0	1/1:3,4:7:12.04:187,12,0	1/1:3,8:11:27.08:412,27,0	1/1:2,12:14:39.13:614,39,0	1/1:0,4:4:6.02:96,6,0	1/1:2,6:8:18.06:289,18,0	1/1:5,20:25:51.17:819,51,0	1/1:1,1:2:3.01:48,3,0	1/1:2,21:23:63.21:1011,63,0	1/1:1,21:22:63.20:984,63,0	1/1:2,33:35:93.32:1484,93,0	1/1:3,9:12:18.06:289,18,0
chr10	24056377	.	ATG	A	4224.24	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=9.826;DP=472;FS=0.000;HRun=0;HaplotypeScore=61.2144;InbreedingCoeff=0.9931;MQ=76.47;MQ0=0;MQRankSum=1.358;QD=41.82;ReadPosRankSum=1.548;VQSLOD=6.5858;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:24.08:0,24,442	0/0:7,0:7:18.06:0,18,348	0/0:14,0:14:39.06:0,39,753	0/0:8,0:8:24.04:0,24,394	0/0:31,0:31:93.32:0,93,1747	0/0:23,0:23:66.23:0,66,1260	0/0:15,0:15:45.15:0,45,868	0/0:29,0:29:81.26:0,81,1499	0/0:14,0:14:36.12:0,36,694	1/1:0,15:15:42.14:643,42,0	1/1:0,23:23:66.22:1008,66,0	0/0:18,0:18:42.12:0,42,743	0/0:16,0:16:45.15:0,45,868	0/0:17,0:17:48.16:0,48,922	0/0:15,0:15:45.15:0,45,869	0/0:11,0:11:33.11:0,33,615	1/1:0,12:12:30.10:459,30,0	1/1:0,6:6:15.05:229,15,0	1/1:2,17:19:51.15:738,51,0	1/1:0,19:19:57.19:872,57,0	1/1:0,7:7:18.06:275,18,0	0/0:16,0:16:48.15:0,48,893	0/0:22,0:22:54.19:0,54,1042	0/0:14,0:14:42.14:0,42,798	0/0:24,0:24:69.19:0,69,1211	0/0:25,1:26:32.32:0,32,1393	0/0:26,0:25:72.25:0,72,1372	0/0:14,0:14:36.12:0,36,695
chr10	24056701	.	ATTAG	A	146.44	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-0.177;DP=503;FS=0.000;HRun=0;HaplotypeScore=133.6287;InbreedingCoeff=0.9244;MQ=76.34;MQ0=0;MQRankSum=-2.042;QD=18.30;ReadPosRankSum=0.235;VQSLOD=3.1004;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,7:8:12.04:232,12,0	0/0:8,0:8:24.08:0,24,657	0/0:15,0:15:44.49:0,44,983	0/0:7,0:7:21.07:0,21,520	0/0:26,0:26:78.23:0,78,2073	0/0:24,0:24:69.24:0,69,1849	0/0:20,0:20:60.21:0,60,1598	0/0:31,0:31:84.29:0,84,2243	0/0:9,0:9:27.09:0,27,739	0/0:17,0:17:51.18:0,51,1349	0/0:23,0:23:66.23:0,66,1805	0/0:14,0:13:33.11:0,33,903	0/0:29,0:29:84.27:0,84,2127	0/0:22,0:22:63.22:0,63,1701	0/0:21,0:21:60.21:0,60,1627	0/0:14,0:14:42.14:0,42,1083	0/0:23,0:23:63.22:0,63,1701	0/0:5,0:5:12.04:0,12,285	0/0:7,0:7:18.05:0,18,400	0/0:26,0:26:75.26:0,75,2043	0/0:11,0:11:33.11:0,33,863	0/0:17,0:17:51.18:0,51,1396	0/0:23,0:22:66.23:0,66,1795	0/0:18,0:18:48.15:0,48,1256	0/0:16,0:16:45.15:0,45,1153	0/0:27,0:27:81.28:0,81,2219	0/0:25,0:25:66.23:0,66,1769	0/0:17,0:17:51.17:0,51,1319
chr10	24056783	.	GGAGAGAGAGAGACAGA	G	3548.02	PASS	AB=0.998;AC=24;AF=0.429;AN=56;BaseQRankSum=-4.103;DP=436;FS=1.142;HRun=0;HaplotypeScore=167.7902;InbreedingCoeff=-0.2563;MQ=68.71;MQ0=9;MQRankSum=-2.297;QD=10.92;ReadPosRankSum=-0.421;VQSLOD=2.5377;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:5:3.01:0,3,69	0/1:10,0:10:28.86:29,0,396	0/0:27,0:12:1.78:0,2,117	0/1:46,0:19:70.18:70,0,99	0/1:17,0:17:56.98:144,0,57	0/1:17,0:17:42.36:171,0,42	0/1:8,0:8:82.76:83,0,84	0/1:25,0:25:99:279,0,191	0/1:6,0:6:12.92:13,0,214	0/1:20,0:23:99:234,0,1136	0/1:17,0:16:84.38:84,0,631	0/0:13,0:13:3.01:0,3,117	0/0:19,0:19:3.48:0,3,119	0/1:13,0:13:0:0,0,0	0/0:18,0:18:42.10:0,42,1699	0/0:16,0:16:41.64:0,42,1251	0/1:15,0:15:55.72:62,0,56	0/0:6,0:8:5.14:0,5,207	0/1:12,0:11:99:111,0,285	0/1:26,0:26:99:174,0,323	1/1:7,0:7:4.19:33,4,0	0/0:5,0:5:6.02:0,6,77	0/1:12,0:12:59.97:60,0,218	0/1:11,0:11:44.78:79,0,45	0/1:15,0:15:63.87:64,0,258	1/1:13,2:15:36.03:687,36,0	1/1:2,18:23:29.31:1079,29,0	1/1:5,0:5:11.96:94,12,0
chr10	24056792	.	GAGAC	G	4243.33	PASS	AB=0.920;AC=46;AF=0.821;AN=56;BaseQRankSum=-2.444;DP=415;FS=16.552;HRun=0;HaplotypeScore=89.4973;InbreedingCoeff=0.1606;MQ=64.36;MQ0=11;MQRankSum=-0.840;QD=11.38;ReadPosRankSum=0.327;VQSLOD=2.9994;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,0:7:5.98:49,6,0	1/1:9,0:9:20.97:174,21,0	0/0:24,0:9:0.20:0,0,114	0/1:45,0:18:69.77:70,0,99	1/1:11,0:11:26.96:221,27,0	1/1:13,1:14:26.96:223,27,0	1/1:11,0:10:20.98:177,21,0	1/1:18,0:18:50.80:430,51,0	1/1:9,0:9:18.42:169,18,0	0/1:20,0:20:99:260,0,122	0/1:17,0:16:77.72:81,0,78	1/1:1,12:13:3.01:56,3,0	1/1:0,18:18:2.16:55,2,0	0/1:1,13:14:0:0,0,0	0/1:19,0:19:27.18:27,0,219	0/0:18,0:18:16.83:0,17,292	1/1:17,0:17:29.36:175,29,0	0/1:5,0:5:17.22:24,0,17	1/1:14,0:12:3.02:175,3,0	1/1:20,0:20:18.17:264,18,0	1/1:7,0:7:8.63:61,9,0	1/1:4,0:4:5.99:50,6,0	1/1:12,0:12:26.76:210,27,0	1/1:15,0:15:23.58:215,24,0	1/1:15,0:15:41.97:368,42,0	1/1:13,0:12:35.98:331,36,0	1/1:21,0:21:29.38:286,29,0	1/1:4,0:4:11.96:94,12,0
chr10	24056796	.	CAG	C	375.67	PASS	AB=1.000;AC=18;AF=0.375;AN=48;BaseQRankSum=1.006;DP=424;FS=7.391;HRun=0;HaplotypeScore=95.4165;InbreedingCoeff=0.3531;MQ=60.08;MQ0=13;MQRankSum=0.473;QD=2.42;ReadPosRankSum=3.284;VQSLOD=0.9690;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:9:2.99:0,3,23	./.	0/0:24,0:7:0.47:0,0,1	0/0:43,0:16:0:0,0,0	./.	0/0:14,0:14:2.99:0,3,24	1/1:11,0:10:0.47:1,0,0	0/0:19,0:19:0.89:0,1,2	1/1:8,0:8:2.76:7,3,0	0/0:22,0:21:23.85:0,24,194	0/0:19,0:18:2.02:0,2,79	1/1:13,0:13:2.68:11,3,0	1/1:18,0:18:2.68:11,3,0	0/0:14,0:14:0.47:0,0,1	1/1:6,9:18:23.56:206,24,0	1/1:10,7:18:11.08:111,11,0	0/0:18,0:18:5.50:0,6,32	0/0:5,0:5:4.51:0,5,23	0/0:14,0:12:3.01:0,3,32	0/0:18,0:18:2.96:0,3,19	0/0:7,0:7:0.47:0,0,1	0/0:6,0:6:0:0,0,0	./.	1/1:15,0:15:1.36:3,1,0	0/1:17,0:17:9.32:9,0,63	0/1:16,0:15:10.48:29,0,10	1/1:21,0:21:22.62:111,23,0	./.
chr10	24058994	.	AACCCCCCT	A	19937.92	PASS	AB=0.982;AC=31;AF=0.554;AN=56;BaseQRankSum=15.242;DP=630;FS=2.493;HRun=0;HaplotypeScore=209.8518;InbreedingCoeff=-0.7723;MQ=62.00;MQ0=0;MQRankSum=-10.721;QD=31.65;ReadPosRankSum=13.797;VQSLOD=2.4928;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:33,1:34:99:1004,0,141	0/1:8,0:8:2.94:277,0,3	0/1:23,0:22:99:470,0,151	0/1:32,0:28:99:615,0,275	0/1:19,0:19:99:375,0,113	0/1:15,0:15:30.92:314,0,31	0/1:26,1:27:99:864,0,115	0/1:21,0:21:99:516,0,174	0/1:27,0:27:50.48:1138,0,50	0/1:30,0:30:50.12:1091,0,50	1/1:10,1:11:21.07:446,21,0	0/1:22,1:23:0.70:932,0,1	0/1:33,0:33:11.56:1293,0,12	0/1:31,1:32:39.63:1117,0,40	0/1:27,1:28:34.64:1046,0,35	0/1:31,0:31:34.60:1379,0,35	0/1:29,0:29:99:823,0,113	0/1:22,0:22:58.79:575,0,59	0/1:20,0:20:99:698,0,123	0/1:9,0:9:56.89:209,0,57	0/1:26,0:26:99:277,0,134	0/1:20,0:20:99:573,0,137	0/1:11,3:14:4.81:697,0,5	0/1:25,0:25:99:356,0,108	0/1:14,1:15:57.95:395,0,58	0/1:25,1:25:21.86:1044,0,22	1/1:25,0:25:0.29:1122,0,0	1/1:5,0:5:15.05:291,15,0
chr10	24059332	.	G	GAAACA	19359.98	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=10.606;DP=611;FS=10.464;HRun=0;HaplotypeScore=122.2788;InbreedingCoeff=0.9340;MQ=59.73;MQ0=1;MQRankSum=-10.256;QD=42.93;ReadPosRankSum=-0.639;VQSLOD=4.5572;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,16:23:34:905,34,0	1/1:1,8:9:24.08:693,24,0	0/0:30,0:18:7.77:0,8,202	0/0:24,0:12:8.96:0,9,133	1/1:7,22:30:51.13:1305,51,0	1/1:6,15:22:38.23:1064,38,0	1/1:3,8:11:6.02:174,6,0	1/1:13,18:34:66.20:1303,66,0	1/1:4,8:13:24.08:696,24,0	1/1:10,20:30:50.95:1308,51,0	1/1:14,14:28:57.20:1472,57,0	1/1:5,15:22:33.06:890,33,0	1/1:4,26:33:57.19:1605,57,0	1/1:5,17:22:39.13:1040,39,0	0/0:20,0:20:42.14:0,42,781	0/0:24,0:24:63.19:0,63,1120	1/1:7,13:23:14.59:382,15,0	1/1:6,5:11:15.94:438,16,0	1/1:8,6:16:24.05:468,24,0	1/1:10,18:30:54.10:1391,54,0	1/1:5,4:10:12.04:287,12,0	1/1:4,15:20:39.05:948,39,0	1/1:7,11:22:32.65:904,33,0	1/1:4,10:14:9.03:260,9,0	1/1:4,24:28:63.22:1830,63,0	0/0:26,0:26:66.22:0,66,1219	0/0:24,0:23:66.21:0,66,1225	0/0:12,0:12:30.10:0,30,556
chr10	24059833	.	CACACACACACAG	C	2311.34	PASS	AB=1.000;AC=35;AF=0.648;AN=54;BaseQRankSum=-3.293;DP=473;FS=20.694;HRun=0;HaplotypeScore=141.9819;InbreedingCoeff=0.0643;MQ=51.35;MQ0=18;MQRankSum=-0.447;QD=6.05;ReadPosRankSum=-3.709;VQSLOD=0.1926;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:24:11.71:44,0,12	1/1:5,0:5:9.87:76,10,0	./.	0/0:28,0:9:5.88:0,6,36	0/1:18,0:17:48.21:141,0,48	1/1:23,0:23:0.37:129,0,0	1/1:13,0:13:14.80:99,15,0	1/1:15,0:13:6.57:89,7,0	1/1:3,13:15:3.01:108,3,0	0/1:13,0:13:34.27:104,0,34	0/1:13,0:13:50.57:51,0,304	0/1:11,0:11:27.89:81,0,28	1/1:15,0:15:34.70:270,35,0	0/1:23,0:22:0:0,0,0	0/0:17,0:17:32.48:0,32,1057	0/0:17,0:17:42.12:0,42,1611	0/1:18,0:18:12.88:13,0,59	0/1:21,0:20:99:106,0,171	0/1:15,0:12:48.40:48,0,199	0/0:18,0:18:9.03:0,9,207	0/1:17,0:12:29.54:30,0,177	0/1:14,0:14:1.62:132,0,2	1/1:14,0:14:27.60:223,28,0	1/1:16,0:15:12.86:92,13,0	1/1:27,0:27:2.94:18,3,0	1/1:20,0:17:11.52:243,12,0	1/1:20,0:20:38.75:296,39,0	1/1:9,0:9:11.50:83,12,0
chr10	24059837	.	CACACACAG	C	3910.16	PASS	AB=0.918;AC=40;AF=0.741;AN=54;BaseQRankSum=-0.928;DP=472;FS=16.928;HRun=0;HaplotypeScore=118.3158;InbreedingCoeff=0.3948;MQ=51.13;MQ0=20;MQRankSum=-0.518;QD=10.18;ReadPosRankSum=-4.974;VQSLOD=-0.5818;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:25:11.19:78,11,0	1/1:6,0:6:14.98:123,15,0	./.	0/0:25,0:8:5.82:0,6,36	1/1:17,0:16:29.84:240,30,0	1/1:22,0:22:39.40:316,39,0	1/1:12,0:12:17.93:208,18,0	1/1:17,0:15:18.67:155,19,0	1/1:16,0:15:3.01:62,3,0	1/1:16,0:16:7.50:188,8,0	0/1:12,0:12:73.92:115,0,74	1/1:11,0:11:20.82:168,21,0	1/1:15,0:15:34.60:251,35,0	0/1:1,23:23:0:0,0,0	0/0:17,0:17:34.68:0,35,632	0/0:17,0:17:42.06:0,42,1024	0/1:18,0:18:4.45:55,0,4	0/1:21,0:20:61.13:152,0,61	0/1:13,0:10:46.20:94,0,46	0/0:20,0:20:8.89:0,9,78	0/1:18,0:13:37.09:74,0,37	1/1:15,0:15:41.94:399,42,0	1/1:14,0:14:33.12:273,33,0	1/1:16,0:15:15.39:114,15,0	1/1:2,24:26:3.01:81,3,0	1/1:20,0:17:43.20:353,43,0	1/1:19,0:19:38.77:297,39,0	1/1:9,0:9:17.63:111,18,0
chr10	24059843	.	CAG	C	4753.49	PASS	AC=46;AF=0.852;AN=54;BaseQRankSum=4.297;DP=484;FS=17.188;HRun=0;HaplotypeScore=89.5219;InbreedingCoeff=0.7759;MQ=49.64;MQ0=21;MQRankSum=0.784;QD=12.22;ReadPosRankSum=-3.835;VQSLOD=2.0834;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:27:15.84:120,16,0	1/1:7,0:7:17.97:147,18,0	./.	0/0:24,0:4:5.73:0,6,36	1/1:18,0:17:35.91:288,36,0	1/1:22,0:22:38.89:315,39,0	1/1:16,0:16:26.82:208,27,0	1/1:17,0:15:33.33:218,33,0	1/1:14,0:13:2.97:20,3,0	1/1:5,11:16:32.58:239,33,0	1/1:15,1:16:41.92:358,42,0	1/1:10,0:10:20.58:168,21,0	1/1:15,0:15:37.58:273,38,0	0/0:23,0:22:0:0,0,0	0/0:17,0:17:25.15:0,25,272	0/0:18,0:18:35.12:0,35,416	1/1:4,14:18:11.83:102,12,0	1/1:20,0:19:17.23:204,17,0	1/1:6,8:11:29.86:206,30,0	1/1:0,21:21:8.98:110,9,0	1/1:19,0:14:24.36:185,24,0	1/1:15,0:15:41.93:343,42,0	1/1:14,0:14:32.23:242,32,0	1/1:15,0:14:18.38:138,18,0	1/1:24,0:24:2.98:22,3,0	1/1:19,0:16:41.88:350,42,0	1/1:19,0:19:44.78:345,45,0	1/1:11,0:11:23.25:152,23,0
chr10	24061505	.	G	GA	4800.64	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-12.425;DP=563;FS=4.061;HRun=4;HaplotypeScore=51.1581;InbreedingCoeff=0.9805;MQ=71.26;MQ0=0;MQRankSum=-0.399;QD=36.10;ReadPosRankSum=-0.354;VQSLOD=4.9891;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,99,1122	0/0:7,0:7:21.06:0,21,238	0/0:8,0:8:10.48:0,10,106	0/0:9,0:9:12.02:0,12,125	0/0:33,0:33:96.27:0,96,1088	0/0:19,0:19:48.13:0,48,542	0/0:26,0:26:72.20:0,72,816	0/0:34,0:34:84.24:0,84,953	0/0:16,0:16:45.13:0,45,510	1/1:5,29:34:91.52:1196,92,0	1/1:2,14:16:36.08:471,36,0	0/0:13,0:13:36.10:0,36,408	0/0:23,0:23:66.19:0,66,748	0/0:23,0:23:66.17:0,66,738	0/0:19,0:19:54.13:0,54,595	0/0:20,0:20:54.14:0,54,603	1/1:0,11:11:33.11:451,33,0	1/1:1,8:9:24.08:328,24,0	1/1:2,19:21:57.66:780,58,0	1/1:3,30:33:93.27:1249,93,0	1/1:2,7:9:24.08:326,24,0	0/0:21,0:21:60.17:0,60,681	0/0:18,0:18:51.15:0,51,578	0/0:18,0:18:51.13:0,51,569	0/0:24,0:24:69.20:0,69,783	0/0:33,2:35:17.16:0,17,954	0/0:25,0:25:72.20:0,72,816	0/0:5,0:5:15.04:0,15,170
chr10	24062220	.	CT	C	12197.22	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=-0.901;DP=654;FS=0.000;HRun=9;HaplotypeScore=146.9754;InbreedingCoeff=0.9969;MQ=67.83;MQ0=0;MQRankSum=-1.721;QD=23.59;ReadPosRankSum=1.545;VQSLOD=3.2165;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,18:20:51.03:467,51,0	1/1:1,11:12:30.01:275,30,0	0/0:7,0:8:16.98:0,17,163	0/0:12,0:12:24.49:0,24,228	1/1:3,27:30:78.04:714,78,0	1/1:1,30:31:84.05:769,84,0	1/1:2,16:18:48.03:439,48,0	1/1:5,32:37:96:866,96,0	1/1:0,24:24:66.04:604,66,0	1/1:2,34:36:99:929,102,0	1/1:1,23:24:69.04:632,69,0	1/1:1,26:27:72.03:659,72,0	1/1:4,28:32:78.04:714,78,0	1/1:1,24:25:63.03:577,63,0	0/0:21,0:21:60.17:0,60,682	0/0:26,0:26:72.21:0,72,831	1/1:2,22:24:66.03:604,66,0	1/1:2,10:12:29.51:256,30,0	1/1:6,13:19:38.98:350,39,0	1/1:3,32:35:93.01:844,93,0	1/1:1,11:12:30.02:275,30,0	1/1:4,23:27:63.02:577,63,0	1/1:2,27:29:78.04:714,78,0	1/1:2,21:23:54.03:494,54,0	1/1:1,19:20:48.02:439,48,0	0/0:22,1:23:21.96:0,22,186	0/0:33,0:33:72.30:0,72,345	0/0:14,0:14:36.69:0,37,180
chr10	24063349	.	AT	A	1561.36	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=10.315;DP=602;FS=0.000;HRun=8;HaplotypeScore=54.6959;InbreedingCoeff=0.9295;MQ=76.17;MQ0=0;MQRankSum=-0.773;QD=21.39;ReadPosRankSum=2.200;VQSLOD=3.9136;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:57.17:0,57,689	0/0:8,0:8:24.06:0,24,279	0/0:12,0:12:20.23:0,20,269	0/0:11,0:11:19.99:0,20,252	0/0:48,0:48:99:0,126,1522	0/0:24,0:24:72.22:0,72,870	0/0:21,0:21:54.15:0,54,641	0/0:24,0:24:60.18:0,60,725	0/0:27,0:27:78.23:0,78,933	0/0:33,0:33:93.26:0,93,1097	0/0:32,0:32:93.27:0,93,1104	0/0:22,0:22:60.17:0,60,713	0/0:22,0:22:57.17:0,57,686	0/0:24,0:24:69.19:0,69,810	0/0:21,0:21:54.15:0,54,639	0/0:23,0:23:60.15:0,60,709	0/0:21,0:21:51.10:0,51,586	0/0:5,0:5:15.05:0,15,181	0/0:16,0:16:39.10:0,39,447	0/0:22,0:22:60.16:0,60,705	0/0:1,0:1:3.01:0,3,36	0/0:28,1:29:52.27:0,52,913	0/0:23,0:23:63.17:0,63,738	0/0:8,0:8:24.07:0,24,290	0/0:30,0:30:75.22:0,75,897	1/1:3,32:35:96.14:921,96,0	1/1:1,27:28:60.10:579,60,0	1/1:0,10:10:21.03:203,21,0
chr10	24064359	.	AAGGAAGCGTATATG	A	27109.29	PASS	AC=40;AF=0.741;AN=54;BaseQRankSum=15.175;DP=425;FS=7.058;HRun=0;HaplotypeScore=190.1837;InbreedingCoeff=0.8733;MQ=63.79;MQ0=0;MQRankSum=-14.221;QD=96.82;ReadPosRankSum=-0.176;VQSLOD=4.0989;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,2:2:6.02:256,6,0	1/1:0,5:5:12.04:512,12,0	0/0:10,0:10:27.09:0,27,878	0/0:4,0:4:12.04:0,12,271	1/1:5,17:22:42.14:1678,42,0	1/1:2,8:10:24.08:1022,24,0	1/1:3,7:10:15.05:640,15,0	1/1:5,27:32:81.25:2889,81,0	1/1:4,11:15:33.11:1371,33,0	1/1:1,19:20:57.18:2229,57,0	1/1:2,23:25:60.21:2560,60,0	1/1:0,15:15:36.12:1536,36,0	1/1:3,22:25:63.22:2687,63,0	1/1:3,11:14:33.11:1379,33,0	0/0:25,0:25:75.26:0,75,5038	0/0:21,0:21:63.22:0,63,4077	1/1:1,3:4:3.01:128,3,0	1/1:1,2:3:3.01:91,3,0	1/1:1,6:7:18.06:768,18,0	1/1:0,25:25:72.25:2782,72,0	./.	1/1:1,6:7:18.06:768,18,0	1/1:1,9:10:27.09:1092,27,0	1/1:2,5:7:3.01:128,3,0	1/1:1,21:22:63.22:2592,63,0	0/0:33,0:33:96.33:0,96,6435	0/0:30,0:30:90.31:0,90,6078	0/0:20,0:20:60.21:0,60,4242
chr10	24069059	.	AT	A	4334.06	PASS	AB=0.974;AC=45;AF=0.900;AN=50;BaseQRankSum=-4.368;DP=257;FS=30.538;HRun=8;HaplotypeScore=36.1056;InbreedingCoeff=0.5314;MQ=70.77;MQ0=13;MQRankSum=-3.302;QD=20.64;ReadPosRankSum=1.264;VQSLOD=3.0032;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,10:10:18.03:174,18,0	1/1:0,5:5:15.02:145,15,0	0/1:36,1:13:12.49:12,0,49	0/0:38,1:16:18.87:0,19,113	1/1:0,13:13:26.87:235,27,0	1/1:0,12:12:24.02:232,24,0	./.	1/1:0,12:12:36.06:348,36,0	1/1:0,5:5:15.02:144,15,0	1/1:0,11:11:33.05:319,33,0	1/1:0,14:14:26.96:247,27,0	1/1:0,10:10:24.04:232,24,0	1/1:0,5:5:15.02:145,15,0	1/1:0,1:1:3:29,3,0	0/0:6,0:6:12.04:0,12,145	./.	1/1:0,5:5:15.02:144,15,0	1/1:0,2:2:6.01:58,6,0	1/1:1,2:2:6.01:58,6,0	1/1:0,12:12:33.05:318,33,0	./.	1/1:0,1:1:3:29,3,0	1/1:0,3:3:9.01:87,9,0	1/1:1,0:1:3:29,3,0	1/1:0,14:14:39.06:376,39,0	1/1:0,13:13:39.04:369,39,0	1/1:0,16:16:48.08:463,48,0	1/1:0,5:5:15.02:145,15,0
chr10	24069475	.	CTGTGTGTGTGTGTGTGTG	C	12054.80	PASS	AB=0.857;AC=43;AF=0.796;AN=54;BaseQRankSum=5.093;DP=459;FS=3.609;HRun=0;HaplotypeScore=240.4677;InbreedingCoeff=0.5671;MQ=63.57;MQ0=10;MQRankSum=-1.820;QD=34.84;ReadPosRankSum=2.188;VQSLOD=3.7349;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:21,2:22:4.88:166,5,0	1/1:6,2:8:3.01:146,3,0	0/0:33,0:18:6.02:0,6,139	0/0:33,0:22:14.08:0,14,343	1/1:15,6:20:21.93:783,22,0	1/1:8,8:16:15.05:728,15,0	1/1:12,5:16:9.03:437,9,0	0/0:19,0:18:0:0,0,0	1/1:8,4:12:12.04:582,12,0	1/1:13,3:16:12.03:582,12,0	1/1:14,5:19:15.05:722,15,0	1/1:5,7:12:15.05:728,15,0	1/1:14,9:22:25.75:1308,26,0	1/1:5,5:10:6.02:291,6,0	0/0:7,0:10:12.04:0,12,739	0/0:5,0:8:15.05:0,15,913	0/1:15,3:17:99:137,0,179	1/1:9,1:10:6.02:228,6,0	1/1:13,6:19:14.80:664,15,0	1/1:15,8:23:24.55:1057,25,0	./.	1/1:7,6:13:12.04:582,12,0	1/1:11,7:18:6.02:291,6,0	1/1:6,2:7:3.01:146,3,0	1/1:13,2:14:5.99:168,6,0	1/1:12,2:14:6.01:291,6,0	1/1:12,10:22:30.10:1436,30,0	1/1:4,4:8:12.04:582,12,0
chr10	24069759	.	TA	T	11783.42	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=6.152;DP=543;FS=12.737;HRun=8;HaplotypeScore=57.0403;InbreedingCoeff=0.9847;MQ=72.44;MQ0=0;MQRankSum=-4.303;QD=24.30;ReadPosRankSum=3.323;VQSLOD=4.7086;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,8:8:21.03:203,21,0	1/1:4,10:14:27.04:261,27,0	0/0:8,0:8:15.51:0,16,173	0/0:11,0:11:26.94:0,27,290	1/1:2,26:28:66.09:637,66,0	1/1:2,21:23:57.09:550,57,0	1/1:0,14:14:39.06:376,39,0	1/1:5,28:33:84.01:768,84,0	1/1:1,15:16:45.07:434,45,0	1/1:3,23:26:63.03:593,63,0	1/1:0,22:22:63.10:608,63,0	1/1:1,21:22:57.09:550,57,0	1/1:4,18:22:39.05:377,39,0	1/1:1,27:28:72.12:695,72,0	0/0:19,0:19:54.15:0,54,641	0/0:20,0:20:57.15:0,57,665	1/1:1,17:18:48.07:463,48,0	1/1:4,9:13:24.04:232,24,0	1/1:0,13:13:39.06:374,39,0	1/1:3,35:38:99:991,105,0	1/1:1,10:11:30.05:290,30,0	1/1:1,15:16:45.07:434,45,0	1/1:2,26:29:75.12:724,75,0	1/1:1,9:10:27.04:261,27,0	1/1:0,21:21:60.10:579,60,0	1/1:2,26:28:78.10:746,78,0	1/1:4,21:25:54.08:521,54,0	1/1:0,7:7:12.02:116,12,0
chr10	24070081	.	GA	G	15462.41	PASS	AB=0.879;AC=43;AF=0.768;AN=56;BaseQRankSum=7.069;DP=662;FS=3.420;HRun=3;HaplotypeScore=86.8406;InbreedingCoeff=0.8991;MQ=76.87;MQ0=0;MQRankSum=-4.802;QD=30.14;ReadPosRankSum=2.588;VQSLOD=4.7427;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,28:28:72.23:892,72,0	1/1:0,9:9:24.08:297,24,0	0/0:33,0:31:65.63:0,66,1010	0/0:33,0:30:73.80:0,74,908	1/1:2,24:26:66.12:782,66,0	1/1:0,24:24:63.20:781,63,0	1/1:0,15:15:42.13:520,42,0	1/1:2,22:24:66.17:781,66,0	1/1:1,26:27:69.22:850,69,0	1/1:2,24:26:72.21:880,72,0	1/1:0,16:16:42.13:516,42,0	1/1:0,32:32:81.25:1003,81,0	1/1:1,29:30:75.24:929,75,0	1/1:1,29:30:69.22:855,69,0	0/0:20,0:20:60.20:0,60,860	0/0:29,0:29:87.29:0,87,1253	1/1:1,10:11:27.08:335,27,0	1/1:0,11:11:30.09:371,30,0	1/1:2,19:21:57.18:707,57,0	1/1:2,27:29:75.19:909,75,0	1/1:0,36:36:96.30:1190,96,0	1/1:0,23:23:57.18:706,57,0	1/1:0,18:18:51.16:631,51,0	1/1:0,22:22:51.16:632,51,0	1/1:0,26:26:69.16:834,69,0	0/1:25,4:29:61.53:62,0,955	0/0:23,0:23:66.21:0,66,933	0/0:10,0:10:30.10:0,30,431
chr10	24070362	.	TACACACACACACACACAC	T	5139.95	PASS	AB=0.728;AC=24;AF=0.444;AN=54;BaseQRankSum=5.867;DP=463;FS=16.657;HRun=0;HaplotypeScore=201.2356;InbreedingCoeff=0.6317;MQ=66.59;MQ0=16;MQRankSum=-6.400;QD=24.95;ReadPosRankSum=-1.345;VQSLOD=2.5585;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:18:6.02:0,6,135	1/1:5,0:9:9.03:257,9,0	./.	0/0:30,0:21:7.73:0,8,59	1/1:9,4:15:17.09:653,17,0	1/1:19,10:31:27.09:1269,27,0	0/1:11,4:15:42.58:139,0,43	1/1:23,0:23:0.60:41,1,0	1/1:8,8:16:12.04:582,12,0	0/0:16,0:19:33.10:0,33,904	0/0:6,0:13:24.07:0,24,452	1/1:6,9:15:9.03:436,9,0	0/1:8,0:16:31.52:582,0,32	1/1:9,9:18:9.03:436,9,0	0/0:14,0:14:27.09:0,27,1771	0/0:14,0:16:29.30:0,29,1494	0/0:16,0:16:9.03:0,9,243	0/0:7,0:7:6.02:0,6,200	0/0:11,0:10:10.59:0,11,239	0/0:21,0:27:17.43:0,17,445	0/0:16,0:15:15.52:0,16,475	1/1:5,5:10:6.02:291,6,0	1/1:7,5:12:3.01:145,3,0	1/1:14,0:15:3.01:38,3,0	1/1:7,2:8:6.02:271,6,0	0/0:15,0:14:20.25:0,20,421	0/0:12,0:17:21.06:0,21,463	0/0:4,0:7:9.03:0,9,137
chr10	24070986	.	TACAC	T	6453.06	PASS	AB=0.929;AC=39;AF=0.696;AN=56;BaseQRankSum=4.609;DP=458;FS=8.216;HRun=0;HaplotypeScore=168.4864;InbreedingCoeff=0.5821;MQ=65.59;MQ0=6;MQRankSum=-1.349;QD=18.18;ReadPosRankSum=1.732;VQSLOD=4.0201;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:21,3:24:39.07:477,39,0	1/1:9,3:12:29.89:353,30,0	0/0:28,0:17:10.10:0,10,72	0/0:25,0:18:14.54:0,15,109	1/1:2,18:20:2.62:49,3,0	1/1:18,5:23:30.04:414,30,0	1/1:13,2:15:30.10:402,30,0	1/1:9,19:28:55.77:561,56,0	1/1:7,4:11:2.74:188,3,0	1/1:12,4:16:18.77:444,19,0	1/1:0,18:18:9.03:149,9,0	1/1:4,4:8:17.80:251,18,0	1/1:11,3:14:33.05:426,33,0	1/1:9,3:12:17.99:253,18,0	0/0:9,0:9:24.08:0,24,539	0/0:6,0:6:9.02:0,9,175	0/1:12,3:15:16.67:229,0,17	0/1:8,0:8:35.69:74,0,36	1/1:8,2:9:18.03:246,18,0	1/1:17,7:24:41.40:511,41,0	0/0:12,0:9:2.78:0,3,14	1/1:2,18:20:18.06:276,18,0	1/1:0,11:11:9.03:114,9,0	1/1:18,2:19:14.99:208,15,0	1/1:14,12:26:62.93:805,63,0	0/1:19,1:20:24.77:25,0,149	0/0:13,0:13:12.41:0,12,131	0/0:10,0:10:3.41:0,3,19
chr10	24071013	.	ACACACACACACACG	A	6896.68	PASS	AB=1.000;AC=40;AF=0.714;AN=56;BaseQRankSum=4.740;DP=494;FS=1.505;HRun=0;HaplotypeScore=230.9696;InbreedingCoeff=0.4446;MQ=41.31;MQ0=23;MQRankSum=-3.221;QD=17.24;ReadPosRankSum=0.387;VQSLOD=3.6911;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:25:53.78:75,0,54	1/1:14,0:14:14.17:266,14,0	0/0:34,0:3:3.01:0,3,46	0/0:32,0:7:2.99:0,3,127	1/1:19,1:20:4.39:104,4,0	1/1:16,1:17:30.48:577,30,0	1/1:16,0:14:14.97:208,15,0	1/1:29,0:28:19.23:93,19,0	1/1:10,0:10:14.11:238,14,0	1/1:22,0:21:21.76:523,22,0	1/1:19,0:19:9.92:337,10,0	1/1:11,1:12:10.33:475,10,0	1/1:14,0:14:13.60:402,14,0	1/1:14,0:14:12.93:345,13,0	0/0:10,0:10:25.99:0,26,1159	0/0:4,0:4:8.84:0,9,556	0/1:21,0:20:14.15:391,0,14	0/1:11,0:11:13.92:14,0,31	1/1:13,0:11:11.64:320,12,0	1/1:33,0:33:24.53:582,25,0	1/1:16,0:13:0.45:2,0,0	1/1:19,0:19:18.04:511,18,0	1/1:11,1:12:10.72:165,11,0	1/1:19,0:18:3.67:101,4,0	1/1:23,0:22:48.13:1079,48,0	0/1:20,0:19:88.57:89,0,426	0/0:12,0:12:15.05:0,15,443	0/0:1,0:1:3.01:0,3,115
chr10	24071015	.	ACACACACACACG	A	7662.32	PASS	AB=1.000;AC=41;AF=0.732;AN=56;BaseQRankSum=4.490;DP=489;FS=2.446;HRun=0;HaplotypeScore=213.0854;InbreedingCoeff=0.5840;MQ=40.92;MQ0=24;MQRankSum=-2.082;QD=19.40;ReadPosRankSum=-0.199;VQSLOD=3.7211;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:22:16.01:175,16,0	1/1:11,3:14:22.37:369,22,0	0/0:35,0:3:5.91:0,6,61	0/0:32,0:7:17.90:0,18,189	1/1:13,6:19:3.50:108,3,0	1/1:13,4:17:30.18:672,30,0	1/1:13,2:13:14.49:230,14,0	1/1:30,0:29:40.72:506,41,0	1/1:6,4:10:15.95:308,16,0	1/1:22,0:21:37.14:458,37,0	1/1:20,0:20:10.28:255,10,0	1/1:8,3:11:18.52:481,19,0	1/1:10,4:14:11.58:408,12,0	1/1:11,3:14:14.64:372,15,0	0/0:10,0:10:7.13:0,7,974	0/0:4,0:4:9.03:0,9,474	0/1:20,0:19:2.11:325,0,2	0/1:11,0:11:13.55:38,0,14	1/1:13,1:12:24.39:351,24,0	1/1:32,0:32:24.07:402,24,0	1/1:16,0:13:1.80:6,2,0	1/1:13,5:18:21.04:593,21,0	1/1:10,2:12:12.86:177,13,0	1/1:17,2:18:6.89:152,7,0	1/1:11,12:22:52.08:1210,52,0	0/1:21,0:20:66.19:66,0,273	0/0:12,0:12:15.52:0,16,337	0/0:1,0:1:3.01:0,3,102
chr10	24071017	.	ACACACACACG	A	6767.65	PASS	AB=0.977;AC=44;AF=0.786;AN=56;BaseQRankSum=4.414;DP=493;FS=0.750;HRun=0;HaplotypeScore=202.5952;InbreedingCoeff=0.5552;MQ=40.64;MQ0=28;MQRankSum=-0.917;QD=15.81;ReadPosRankSum=-0.750;VQSLOD=3.4435;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:22:28.39:317,28,0	1/1:14,0:14:15.06:213,15,0	0/0:38,0:3:5.91:0,6,60	0/1:35,0:9:10:10,0,127	1/1:19,0:19:3.25:78,3,0	1/1:17,0:17:25.23:437,25,0	1/1:14,0:12:14.91:171,15,0	1/1:29,0:28:31.31:135,31,0	1/1:10,0:10:15.50:203,16,0	1/1:6,17:22:49.78:634,50,0	1/1:16,4:20:18.03:376,18,0	1/1:11,0:11:2.35:325,2,0	1/1:14,0:14:15.04:332,15,0	1/1:14,0:14:11.63:241,12,0	0/0:10,0:10:7.13:0,7,872	0/0:4,0:4:9.03:0,9,398	1/1:17,3:19:11.66:605,12,0	1/1:11,0:11:7.10:104,7,0	1/1:13,1:12:28.88:429,29,0	1/1:14,18:32:24.84:458,25,0	1/1:16,0:13:5.78:90,6,0	1/1:18,0:18:23.69:433,24,0	1/1:12,0:12:12.43:126,12,0	1/1:18,0:17:5.67:88,6,0	1/1:23,0:22:45.82:855,46,0	0/1:20,1:20:99:107,0,151	0/0:12,0:12:11.22:0,11,220	0/0:1,0:1:3.01:0,3,68
chr10	24071025	.	ACG	A	4755.87	PASS	AB=1.000;AC=50;AF=0.893;AN=56;BaseQRankSum=4.960;DP=487;FS=1.734;HRun=0;HaplotypeScore=153.5122;InbreedingCoeff=0.5148;MQ=42.00;MQ0=30;MQRankSum=-1.136;QD=10.12;ReadPosRankSum=0.084;VQSLOD=4.7001;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:22:33.67:239,34,0	1/1:11,0:11:19.15:161,19,0	0/1:41,0:4:20.09:26,0,20	0/1:40,0:14:51.46:51,0,88	1/1:18,1:19:8.81:74,9,0	1/1:17,0:17:31.81:249,32,0	1/1:13,0:11:20.87:156,21,0	1/1:30,0:29:54.23:471,54,0	1/1:8,0:8:14.60:108,15,0	1/1:22,0:21:50.73:398,51,0	1/1:21,0:21:20.95:167,21,0	1/1:10,0:10:13.88:118,14,0	1/1:10,0:10:13.89:118,14,0	1/1:9,0:9:14.97:121,15,0	0/0:10,0:10:7.09:0,7,407	0/0:7,0:7:17.75:0,18,236	1/1:20,0:19:14.12:207,14,0	1/1:9,0:9:18.31:126,18,0	1/1:14,0:12:32.78:244,33,0	1/1:28,0:29:24.24:171,24,0	1/1:17,0:14:11.93:99,12,0	1/1:19,0:19:32.86:256,33,0	1/1:12,0:12:14.78:106,15,0	1/1:16,0:15:8.91:69,9,0	1/1:23,0:22:51.10:371,51,0	1/1:20,1:20:53.04:472,53,0	1/1:2,12:14:17.47:177,17,0	1/1:1,0:1:0.47:1,0,0
chr10	24071715	.	GA	G	13324.86	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=8.337;DP=617;FS=3.011;HRun=5;HaplotypeScore=68.4468;InbreedingCoeff=0.9927;MQ=93.53;MQ0=0;MQRankSum=-5.663;QD=29.55;ReadPosRankSum=3.304;VQSLOD=5.4924;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,24:24:63.18:715,63,0	1/1:0,8:8:21.06:238,21,0	0/0:26,0:26:62.88:0,63,822	0/0:28,0:28:42.32:0,42,877	1/1:5,24:29:72.20:817,72,0	1/1:2,31:33:87.24:985,87,0	1/1:2,16:18:36.10:408,36,0	1/1:3,27:30:81.18:890,81,0	1/1:0,12:12:33.09:374,33,0	1/1:3,28:31:84.23:944,84,0	1/1:1,24:25:63.18:715,63,0	1/1:0,13:13:36.10:408,36,0	1/1:2,19:21:54.15:612,54,0	1/1:2,28:30:78.22:885,78,0	0/0:23,0:23:66.21:0,66,885	0/0:22,0:22:63.21:0,63,862	1/1:1,21:22:60.17:681,60,0	1/1:0,7:7:21.06:238,21,0	1/1:2,17:19:51.14:578,51,0	1/1:3,26:29:78.22:884,78,0	1/1:1,14:15:42.12:476,42,0	1/1:2,15:17:45.13:506,45,0	1/1:1,30:31:75.18:848,75,0	1/1:2,14:16:42.12:476,42,0	1/1:0,21:21:57.16:646,57,0	0/0:30,1:31:56.26:0,56,1155	0/0:29,0:29:84.24:0,84,1111	0/0:7,0:7:11.96:0,12,123
chr10	24072111	.	A	ATTT	1667.94	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-1.908;DP=510;FS=1.345;HRun=9;HaplotypeScore=97.6185;InbreedingCoeff=0.9239;MQ=70.68;MQ0=0;MQRankSum=-0.855;QD=34.04;ReadPosRankSum=-1.293;VQSLOD=2.8757;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:47.61:0,48,577	0/0:16,0:16:36.08:0,36,453	0/0:7,0:6:6.90:0,7,78	0/0:13,0:11:9.95:0,10,109	0/0:28,0:29:75.10:0,75,911	0/0:31,0:33:71.63:0,72,826	0/0:10,0:10:27.08:0,27,338	0/0:25,0:26:54.04:0,54,651	0/0:15,0:15:27.04:0,27,341	0/0:21,0:20:60.18:0,60,758	0/0:34,0:35:86.61:0,87,1050	0/0:19,0:19:36.01:0,36,455	0/0:27,0:28:57.03:0,57,696	0/0:13,0:13:30.05:0,30,376	0/0:12,0:12:27.07:0,27,341	0/0:11,0:11:33.11:0,33,417	0/0:11,0:12:29.98:0,30,359	0/0:3,0:4:7.57:0,8,93	0/0:9,0:9:24.07:0,24,303	0/0:24,0:24:60.15:0,60,744	0/0:13,0:13:21.04:0,21,265	0/0:19,0:20:49.75:0,50,632	0/0:22,0:22:45.07:0,45,554	0/0:22,0:22:54.11:0,54,668	0/0:29,0:29:66.18:0,66,833	1/1:4,16:21:51.05:807,51,0	1/1:4,9:15:30.02:464,30,0	1/1:4,8:13:30.10:539,30,0
chr10	24072348	.	T	TGA	27841.65	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=8.558;DP=635;FS=0.000;HRun=0;HaplotypeScore=133.3012;InbreedingCoeff=0.9913;MQ=80.34;MQ0=0;MQRankSum=-7.667;QD=49.72;ReadPosRankSum=2.212;VQSLOD=4.9900;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,22:24:45.15:869,45,0	1/1:2,15:17:45.15:869,45,0	0/0:22,0:22:57.17:0,57,806	0/0:17,0:17:48.02:0,48,644	1/1:1,29:30:66.23:1256,66,0	1/1:1,27:28:75.26:1443,75,0	1/1:0,17:17:51.17:984,51,0	1/1:17,25:44:99:2145,120,0	1/1:2,20:22:60.21:1138,60,0	1/1:2,24:27:72.24:1327,72,0	1/1:2,25:27:69.24:1331,69,0	1/1:0,22:22:66.23:1270,66,0	1/1:3,28:32:78.27:1474,78,0	1/1:1,22:23:66.23:1269,66,0	0/0:21,0:21:60.20:0,60,907	0/0:15,0:15:45.15:0,45,689	1/1:1,17:18:39.13:753,39,0	1/1:2,3:6:12.04:231,12,0	1/1:1,12:13:36.12:695,36,0	1/1:4,36:40:99:2017,105,0	1/1:0,25:25:59.55:1158,60,0	1/1:0,18:18:45.15:868,45,0	1/1:1,26:27:75.26:1447,75,0	1/1:1,13:14:33.11:637,33,0	1/1:1,25:27:72.25:1390,72,0	1/1:1,25:27:78.25:1472,78,0	1/1:1,12:13:39.13:752,39,0	1/1:0,18:18:54.19:1043,54,0
chr10	24073127	.	CTCAG	C	8323.35	PASS	AB=0.524;AC=47;AF=0.839;AN=56;BaseQRankSum=9.085;DP=545;FS=33.342;HRun=0;HaplotypeScore=178.3653;InbreedingCoeff=0.7546;MQ=83.36;MQ0=1;MQRankSum=-12.742;QD=24.48;ReadPosRankSum=1.466;VQSLOD=2.9826;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,4:11:9.03:174,9,0	1/1:0,7:7:15.05:290,15,0	0/0:67,0:42:99:0,116,2351	0/0:83,0:46:82.56:0,83,1409	1/1:0,21:21:23.68:453,24,0	1/1:3,12:15:24.08:460,24,0	1/1:1,5:6:9.03:174,9,0	1/1:3,14:17:39.13:703,39,0	1/1:3,14:17:27.02:516,27,0	1/1:1,12:14:33.04:517,33,0	1/1:0,14:14:15.05:289,15,0	1/1:2,18:20:30.10:576,30,0	1/1:2,12:14:27.09:518,27,0	1/1:3,9:12:15.05:262,15,0	0/0:26,0:26:69.20:0,69,1696	0/0:29,0:29:87.28:0,87,2061	1/1:3,3:6:3.01:58,3,0	1/1:2,3:5:12.04:207,12,0	1/1:1,8:8:21.06:335,21,0	1/1:1,14:15:33.10:604,33,0	0/1:1,10:11:0:1,0,0	1/1:0,14:14:36.12:694,36,0	1/1:1,6:7:15.05:289,15,0	1/1:1,13:14:6.02:116,6,0	1/1:0,19:19:42.14:804,42,0	1/1:25,1:26:5.08:134,5,0	1/1:27,0:27:2.49:71,2,0	1/1:19,0:19:5.53:80,6,0
chr10	24073129	.	CAG	C	6128.67	PASS	AB=1.000;AC=47;AF=0.839;AN=56;BaseQRankSum=10.187;DP=521;FS=27.697;HRun=0;HaplotypeScore=166.8169;InbreedingCoeff=0.8389;MQ=83.23;MQ0=3;MQRankSum=-12.304;QD=19.83;ReadPosRankSum=3.525;VQSLOD=3.1005;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,2:8:8.93:63,9,0	1/1:7,0:7:14.88:104,15,0	0/0:68,1:41:99:0,116,1931	0/0:88,0:47:87.51:0,88,1366	1/1:21,0:21:19.43:156,19,0	1/1:12,0:12:23.76:163,24,0	1/1:5,0:5:8.93:62,9,0	1/1:14,0:14:38.77:332,39,0	1/1:14,0:14:26.79:201,27,0	1/1:13,0:13:28.85:327,29,0	1/1:14,0:14:14.88:104,15,0	1/1:18,0:18:29.72:205,30,0	1/1:12,0:12:26.75:184,27,0	1/1:9,0:9:14.08:87,14,0	0/0:26,0:26:74.89:0,75,1365	0/0:29,0:29:87.28:0,87,1641	1/1:4,0:4:2.98:21,3,0	1/1:5,0:5:11.88:82,12,0	1/1:8,0:7:20.75:186,21,0	1/1:14,0:14:32.76:233,33,0	0/1:10,0:10:0:0,0,0	1/1:14,0:14:35.71:250,36,0	1/1:6,0:6:14.88:104,15,0	1/1:13,1:14:5.95:41,6,0	1/1:19,0:19:41.64:289,42,0	1/1:3,20:23:69.20:1075,69,0	1/1:0,27:27:66.22:1051,66,0	1/1:0,18:18:51.17:809,51,0
chr10	24073169	.	CTCTG	C	255.94	PASS	AB=0.885;AC=15;AF=0.278;AN=54;BaseQRankSum=3.680;DP=420;FS=4.998;HRun=0;HaplotypeScore=176.1075;InbreedingCoeff=0.2224;MQ=54.06;MQ0=14;MQRankSum=-2.319;QD=2.05;ReadPosRankSum=-2.821;VQSLOD=1.4077;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:5:0:0,0,0	0/1:7,1:8:1.73:2,0,130	0/0:36,0:11:24.14:0,24,508	0/0:68,0:27:26.38:0,26,618	1/1:15,2:17:0.46:2,0,0	0/0:12,2:14:0.42:0,0,1	./.	0/1:17,3:19:94.96:95,0,741	0/0:8,0:8:0:0,0,0	0/1:8,3:10:99:132,0,394	0/0:12,1:13:0:0,0,0	0/0:12,3:15:3.01:0,3,40	0/0:8,0:8:9.03:0,9,177	0/1:6,1:7:0.01:0,0,0	0/0:21,0:21:51.17:0,51,1300	0/0:18,0:18:54.17:0,54,1337	1/1:6,0:6:2.94:18,3,0	0/1:6,2:8:95.54:96,0,178	0/1:12,1:11:18.67:19,0,215	0/0:13,1:13:5.16:0,5,132	1/1:7,1:8:0.28:1,0,0	0/1:8,1:9:0.05:0,0,0	0/1:10,1:10:0:0,0,0	0/1:7,0:6:0:0,0,0	0/0:15,0:15:0.37:0,0,1	0/0:23,0:23:63.20:0,63,1285	0/0:17,0:17:19.33:0,19,349	0/0:15,0:15:45.12:0,45,1000
chr10	24073183	.	CTT	C	237.35	PASS	AB=0.875;AC=12;AF=0.214;AN=56;BaseQRankSum=2.473;DP=382;FS=2.439;HRun=3;HaplotypeScore=158.3839;InbreedingCoeff=0.2589;MQ=47.66;MQ0=4;MQRankSum=-3.114;QD=2.76;ReadPosRankSum=1.437;VQSLOD=-0.0682;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:4,2:6:2.92:0,3,8	1/1:6,1:7:2.94:9,3,0	0/0:32,0:12:32.65:0,33,529	0/0:47,0:20:19.32:0,19,610	0/0:14,4:18:4.66:0,5,13	0/0:14,1:15:7.06:0,7,24	0/0:3,1:4:0:0,0,0	0/1:10,4:14:48.38:149,0,48	0/0:7,1:8:4.52:0,5,12	0/1:13,0:13:21.75:22,0,39	0/0:11,3:14:5.57:0,6,13	0/1:14,2:16:5.74:35,0,6	1/1:13,0:13:2.02:14,2,0	0/0:9,0:9:4.52:0,5,13	0/0:18,0:18:54.19:0,54,1043	0/0:18,0:18:54.17:0,54,981	0/1:4,0:5:0:0,0,0	1/1:5,3:8:1.46:117,1,0	0/0:10,0:10:1.59:0,2,85	1/1:8,2:9:0.37:13,0,0	0/0:5,1:6:4.83:0,5,12	0/0:6,3:9:3.63:0,4,9	0/0:12,0:11:1.81:0,2,5	0/0:4,2:5:1.55:0,2,4	0/0:11,5:15:3.59:0,4,9	0/0:17,1:18:5.23:0,5,417	0/0:15,0:15:9.90:0,10,100	0/0:15,0:15:29.18:0,29,359
chr10	24073185	.	TTATC	T	88.46	PASS	AB=0.855;AC=8;AF=0.190;AN=42;BaseQRankSum=3.286;DP=352;FS=0.000;HRun=0;HaplotypeScore=147.1297;InbreedingCoeff=0.2929;MQ=48.84;MQ0=2;MQRankSum=-3.651;QD=1.38;ReadPosRankSum=-2.577;VQSLOD=2.1109;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	0/0:5,1:6:3.60:0,4,71	0/0:31,0:12:31.90:0,32,500	0/0:45,0:20:38.70:0,39,820	0/0:18,1:19:0.47:0,0,1	0/0:10,3:13:2.80:0,3,13	0/0:2,0:2:0:0,0,0	0/0:9,0:9:5.15:0,5,159	./.	0/1:10,2:12:82.50:82,0,191	0/0:12,1:13:0.47:0,0,1	1/1:13,2:15:2.37:8,2,0	0/0:11,1:12:3.62:0,4,55	./.	0/0:18,0:18:54.19:0,54,1474	0/0:17,0:17:51.16:0,51,1325	0/1:3,1:4:0:0,0,0	0/0:7,0:7:8.16:0,8,58	0/1:7,2:9:85.84:86,0,343	1/1:6,1:6:0.89:2,1,0	./.	./.	./.	./.	0/1:16,1:16:0:0,0,0	0/0:17,0:17:47.50:0,47,700	0/0:16,0:16:11.86:0,12,147	0/0:14,0:14:32.95:0,33,522
chr10	24073193	.	CTCTCTG	C	1658.44	PASS	AB=0.886;AC=18;AF=0.474;AN=38;BaseQRankSum=4.898;DP=350;FS=0.000;HRun=0;HaplotypeScore=144.2757;InbreedingCoeff=0.5878;MQ=44.50;MQ0=5;MQRankSum=-5.418;QD=14.42;ReadPosRankSum=-0.192;VQSLOD=3.0108;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	0/0:5,2:7:6.34:0,6,35	0/0:25,0:7:4.55:0,5,170	0/0:41,0:16:12.91:0,13,168	./.	0/0:6,5:11:0:0,0,0	0/0:5,1:5:6.01:0,6,64	1/1:7,1:8:3.01:39,3,0	./.	1/1:10,6:16:3.76:527,4,0	0/0:11,3:14:0.47:0,0,1	./.	0/0:7,5:12:1.52:0,2,19	./.	0/0:18,0:18:36.11:0,36,990	0/0:15,0:15:33.11:0,33,927	0/1:6,0:5:0:0,0,0	1/1:5,2:7:6.02:101,6,0	1/1:9,0:9:6.02:97,6,0	1/1:6,2:7:0.47:1,0,0	./.	./.	./.	./.	0/1:12,5:16:0:0,0,0	1/1:8,8:16:27.09:499,27,0	1/1:7,10:17:10.17:162,10,0	1/1:3,8:11:21.07:361,21,0
chr10	24073195	.	CTCTG	C	616.89	PASS	AB=0.914;AC=15;AF=0.395;AN=38;BaseQRankSum=7.017;DP=364;FS=0.855;HRun=0;HaplotypeScore=138.0506;InbreedingCoeff=0.2069;MQ=44.01;MQ0=6;MQRankSum=-5.057;QD=4.78;ReadPosRankSum=0.065;VQSLOD=2.6628;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/1:4,1:6:4.56:5,0,6	0/0:24,0:7:14.91:0,15,254	0/0:42,0:16:26.49:0,26,403	./.	0/0:10,3:14:2.88:0,3,15	0/0:5,0:5:5.75:0,6,63	0/0:8,0:7:10.31:0,10,156	./.	1/1:16,2:18:38.20:330,38,0	0/0:13,1:14:0.47:0,0,1	./.	0/1:11,1:13:7.46:38,0,7	./.	0/0:18,0:18:54.17:0,54,1144	0/0:18,0:18:54.14:0,54,1142	0/1:5,1:5:0:0,0,0	1/1:7,0:7:1.90:21,2,0	0/1:7,2:9:99:99,0,212	1/1:11,1:11:3.01:36,3,0	./.	./.	./.	./.	0/1:13,1:14:0:0,0,0	0/1:15,0:15:99:112,0,117	1/1:17,0:17:1.02:39,1,0	0/1:11,0:11:58.23:58,0,130
chr10	24073199	.	G	GTC	371.87	PASS	AB=0.989;AC=13;AF=0.342;AN=38;BaseQRankSum=5.333;DP=386;FS=5.269;HRun=0;HaplotypeScore=129.4801;InbreedingCoeff=0.0506;MQ=42.72;MQ0=10;MQRankSum=-3.546;QD=2.62;ReadPosRankSum=-3.577;VQSLOD=1.2182;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:4:0:0,0,0	0/0:8,0:8:5.79:0,6,49	0/0:24,0:6:14.09:0,14,167	0/0:42,0:15:19.93:0,20,257	./.	1/1:14,1:15:1.03:3,1,0	0/0:5,1:5:5.86:0,6,57	0/1:9,0:7:40.63:41,0,140	./.	0/1:19,1:20:6.24:270,0,6	0/1:15,0:15:0:0,0,0	./.	0/0:13,1:14:1.36:0,1,25	./.	0/0:18,0:18:42.14:0,42,575	0/0:18,0:18:51.15:0,51,678	0/1:6,0:5:0:0,0,0	1/1:6,0:6:2.63:20,3,0	0/1:13,0:11:52.82:53,0,182	0/1:14,0:13:0:0,0,0	./.	./.	./.	./.	./.	0/1:14,0:14:9.36:9,0,251	0/1:18,1:19:33.31:77,0,33	0/1:11,0:11:2.38:2,0,210
chr10	24073231	.	C	CTG	828.45	PASS	AB=0.909;AC=13;AF=0.382;AN=34;BaseQRankSum=5.068;DP=382;FS=2.968;HRun=0;HaplotypeScore=110.7696;InbreedingCoeff=0.1056;MQ=31.05;MQ0=15;MQRankSum=-3.442;QD=5.75;ReadPosRankSum=1.858;VQSLOD=2.9941;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:2,0:2:0:0,0,0	0/0:9,0:9:3.84:0,4,21	./.	0/0:21,0:3:6.02:0,6,77	./.	0/1:19,3:21:0:0,0,0	0/0:10,2:10:5.83:0,6,85	0/1:14,1:11:36.95:37,0,343	./.	0/1:23,5:27:99:293,0,422	0/0:10,2:12:0.47:0,0,1	./.	0/1:8,6:14:74.09:84,0,74	./.	0/0:15,0:15:33.08:0,33,435	0/0:19,0:19:48.10:0,48,612	./.	1/1:4,0:4:2.94:18,3,0	0/1:11,0:9:12.04:12,0,114	./.	./.	./.	./.	./.	0/0:9,11:19:0:0,0,0	1/1:18,0:18:14.87:277,15,0	0/1:19,0:19:10.07:95,0,10	1/1:11,0:11:4.83:124,5,0
chr10	24073233	.	G	GTGTC	1509.71	PASS	AB=0.877;AC=9;AF=0.265;AN=34;BaseQRankSum=4.037;DP=380;FS=1.987;HRun=0;HaplotypeScore=117.2251;InbreedingCoeff=0.2601;MQ=30.85;MQ0=16;MQRankSum=-3.439;QD=15.56;ReadPosRankSum=2.204;VQSLOD=3.6333;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:3,0:3:0:0,0,0	0/0:7,0:9:3.48:0,3,40	./.	0/0:20,0:2:6.02:0,6,96	./.	0/1:20,0:21:0:0,0,0	0/0:12,0:10:5.45:0,5,117	0/0:16,0:11:1.83:0,2,482	./.	0/0:27,0:27:7:0,7,746	1/1:12,0:12:1.25:3,1,0	./.	0/1:13,0:14:8.17:8,0,107	./.	0/0:13,0:13:36.07:0,36,652	0/0:19,0:19:54.14:0,54,933	./.	0/0:4,0:4:2.94:0,3,18	0/0:10,0:8:17.94:0,18,247	0/0:11,0:12:0:0,0,0	./.	./.	./.	./.	./.	1/1:12,6:18:40.03:888,40,0	0/1:8,7:18:9.09:347,0,9	0/1:5,5:10:5.60:365,0,6
chr10	24073237	.	CTCTCTG	C	1126.39	PASS	AB=1.000;AC=11;AF=0.306;AN=36;BaseQRankSum=3.843;DP=389;FS=0.951;HRun=0;HaplotypeScore=122.6683;InbreedingCoeff=0.4194;MQ=31.04;MQ0=18;MQRankSum=-4.946;QD=8.60;ReadPosRankSum=2.014;VQSLOD=2.6346;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:4:0:0,0,0	0/0:9,0:9:3.39:0,3,22	./.	0/0:19,0:2:5.85:0,6,67	./.	0/1:23,0:22:0:0,0,0	0/0:12,0:10:6.49:0,6,97	0/0:16,0:11:29.11:0,29,395	./.	0/0:27,0:26:38.88:0,39,793	1/1:12,0:12:1.25:3,1,0	./.	0/1:14,0:14:16.09:16,0,81	./.	0/0:14,0:14:39.12:0,39,924	0/0:21,0:20:54.17:0,54,1319	./.	0/0:4,0:4:3.01:0,3,35	0/0:10,0:7:17.98:0,18,204	0/1:13,0:13:0:0,0,0	./.	./.	./.	./.	0/1:21,0:21:0:0,0,0	1/1:15,3:18:24.09:656,24,0	1/1:15,4:19:19.26:304,19,0	0/1:10,0:10:14.74:260,0,15
chr10	24073253	.	GTC	G	189.17	PASS	AB=0.886;AC=7;AF=0.250;AN=28;BaseQRankSum=1.641;DP=376;FS=6.046;HRun=0;HaplotypeScore=120.4190;InbreedingCoeff=0.0635;MQ=31.32;MQ0=14;MQRankSum=-3.393;QD=1.74;ReadPosRankSum=0.842;VQSLOD=1.6522;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:4,1:5:0:0,0,0	0/0:8,1:9:3.43:0,3,53	./.	./.	./.	1/1:18,3:20:1.25:3,1,0	0/0:10,0:8:6.02:0,6,77	0/1:7,2:7:11.34:63,0,11	./.	0/1:22,3:24:29.12:156,0,29	0/0:7,2:9:0.47:0,0,1	./.	0/1:14,3:16:8.58:27,0,9	./.	0/0:15,0:15:39.12:0,39,641	0/0:17,0:16:45.15:0,45,768	./.	./.	./.	0/1:17,0:17:0.06:0,0,0	./.	./.	./.	./.	./.	0/0:23,0:23:20.16:0,20,118	0/1:17,3:20:22.52:32,0,23	0/0:11,0:11:19.42:0,19,92
chr10	24073257	.	C	CTCTG	479.72	PASS	AB=0.982;AC=10;AF=0.313;AN=32;BaseQRankSum=1.230;DP=384;FS=0.000;HRun=0;HaplotypeScore=129.6306;InbreedingCoeff=-0.0565;MQ=31.31;MQ0=14;MQRankSum=-5.565;QD=3.55;ReadPosRankSum=-3.235;VQSLOD=1.5414;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:5,0:5:0:0,0,0	0/0:9,0:9:3.23:0,3,56	./.	./.	./.	0/1:21,0:20:0.03:0,0,0	0/0:11,0:9:5.62:0,6,76	0/1:8,0:6:2.38:132,0,2	./.	0/1:26,0:25:99:171,0,216	0/0:11,0:11:1.55:0,2,4	./.	0/1:16,1:16:12.43:63,0,12	./.	0/0:15,0:15:39.12:0,39,693	0/0:17,0:16:45.15:0,45,844	./.	./.	1/1:5,0:2:2.94:18,3,0	0/0:20,0:20:0.47:0,0,1	./.	./.	./.	./.	0/0:26,0:26:1.25:0,1,3	0/1:24,0:24:99:130,0,108	0/1:19,0:19:32.41:32,0,37	0/1:9,0:10:34.20:34,0,49
chr10	24073261	.	CTG	C	330.04	PASS	AB=0.949;AC=12;AF=0.375;AN=32;BaseQRankSum=4.464;DP=372;FS=2.150;HRun=0;HaplotypeScore=112.1354;InbreedingCoeff=0.1786;MQ=33.88;MQ0=14;MQRankSum=-5.548;QD=2.19;ReadPosRankSum=-0.340;VQSLOD=2.3011;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:5:0:0,0,0	0/0:10,0:10:3.43:0,3,52	0/0:7,0:3:2.99:0,3,23	0/0:10,0:2:2.84:0,3,14	./.	0/1:21,0:20:0:0,0,0	0/0:11,0:9:5.91:0,6,38	1/1:5,0:3:6.37:39,6,0	./.	0/1:23,2:24:99:157,0,134	1/1:12,0:12:2.60:10,3,0	./.	1/1:17,0:16:4:15,4,0	./.	0/0:14,0:14:39.12:0,39,718	0/0:17,0:16:45.14:0,45,833	./.	./.	./.	0/1:20,1:21:0:0,0,0	./.	./.	./.	./.	./.	0/1:21,1:22:6.57:125,0,7	0/1:17,1:18:12.72:85,0,13	0/1:9,1:10:1.99:2,0,18
chr10	24073263	.	G	GTC	802.49	PASS	AB=0.984;AC=12;AF=0.400;AN=30;BaseQRankSum=4.882;DP=372;FS=2.093;HRun=0;HaplotypeScore=110.3735;InbreedingCoeff=0.3946;MQ=33.86;MQ0=14;MQRankSum=-5.144;QD=5.82;ReadPosRankSum=-2.088;VQSLOD=3.1113;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:5,0:5:0:0,0,0	0/0:10,0:10:2.97:0,3,27	0/0:8,0:3:2.91:0,3,38	0/0:11,0:3:2.84:0,3,14	./.	0/1:21,0:20:0:0,0,0	0/1:11,0:9:0:0,0,0	./.	./.	0/0:26,0:25:0.69:0,1,128	1/1:11,0:11:0.89:2,1,0	./.	0/1:17,0:16:3.35:5,0,3	./.	0/0:14,0:14:39.13:0,39,506	0/0:17,0:16:42.14:0,42,546	./.	./.	./.	0/1:21,0:21:0.01:0,0,0	./.	./.	./.	./.	./.	1/1:13,9:23:44.47:620,44,0	0/1:17,1:19:4.13:51,0,4	1/1:9,1:10:15.09:222,15,0
chr10	24073269	.	CTCTG	C	191.13	PASS	AB=0.931;AC=6;AF=0.200;AN=30;BaseQRankSum=4.564;DP=376;FS=2.053;HRun=0;HaplotypeScore=121.1852;InbreedingCoeff=0.0147;MQ=36.25;MQ0=11;MQRankSum=-3.523;QD=2.25;ReadPosRankSum=-0.297;VQSLOD=2.4053;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:7:0:0,0,0	0/0:10,0:10:3.27:0,3,17	0/0:8,0:4:8.64:0,9,102	0/0:16,0:7:0.63:0,1,16	./.	./.	0/0:8,0:7:0:0,0,0	./.	./.	0/0:28,0:27:14.48:0,14,652	1/1:12,0:12:1.25:3,1,0	./.	0/1:17,0:16:3.91:4,0,23	./.	0/0:14,0:14:39.13:0,39,978	0/0:16,0:15:45.15:0,45,1144	./.	./.	0/0:3,0:1:2.96:0,3,19	0/0:23,0:23:0.89:0,1,2	./.	./.	./.	./.	./.	0/1:20,3:23:95.33:194,0,95	0/1:17,4:21:31.89:69,0,32	0/1:12,0:12:8.23:8,0,46
chr10	24073289	.	CTCTG	C	66.32	PASS	AB=1.000;AC=7;AF=0.206;AN=34;BaseQRankSum=2.105;DP=367;FS=0.000;HRun=0;HaplotypeScore=106.7341;InbreedingCoeff=0.1992;MQ=59.71;MQ0=8;MQRankSum=-1.106;QD=0.82;ReadPosRankSum=-2.552;VQSLOD=1.3742;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:7:0:0,0,0	0/0:9,0:9:3.38:0,3,19	0/0:25,0:14:11.49:0,11,288	0/0:34,0:17:17.33:0,17,161	./.	./.	./.	0/1:4,0:3:26.74:27,0,30	./.	0/0:22,0:21:12.75:0,13,221	0/0:14,0:14:2.94:0,3,18	./.	1/1:13,0:11:5.68:30,6,0	./.	0/0:14,0:14:33.11:0,33,800	0/0:16,0:15:45.12:0,45,994	0/0:9,0:7:2.37:0,2,8	./.	0/0:2,0:2:2.96:0,3,19	1/1:19,0:19:2.25:9,2,0	./.	./.	./.	./.	0/0:17,0:17:0:0,0,0	0/1:23,0:23:60.66:61,0,94	0/1:22,0:22:10.99:43,0,11	0/0:10,0:10:10.53:0,11,79
chr10	24073291	.	CTG	C	1105.50	PASS	AB=0.866;AC=10;AF=0.313;AN=32;BaseQRankSum=5.737;DP=362;FS=1.570;HRun=0;HaplotypeScore=97.3586;InbreedingCoeff=0.0715;MQ=59.96;MQ0=6;MQRankSum=-2.839;QD=8.50;ReadPosRankSum=-0.059;VQSLOD=2.9820;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	0/0:9,0:9:3.31:0,3,15	0/0:27,0:14:13.83:0,14,332	0/1:34,0:17:33.13:33,0,80	./.	./.	./.	0/1:4,0:3:18.84:19,0,33	./.	0/0:21,0:21:20.64:0,21,387	0/0:14,0:14:2.99:0,3,24	./.	0/1:13,0:11:5.78:6,0,6	./.	0/0:13,0:13:33.11:0,33,636	0/0:16,0:15:45.12:0,45,799	1/1:7,0:6:1.25:3,1,0	./.	0/0:2,0:2:3:0,3,25	0/0:19,0:19:1.35:0,1,5	./.	./.	./.	./.	0/1:16,0:16:0:0,0,0	0/1:8,15:23:26.98:601,0,27	1/1:10,12:22:22.99:262,23,0	0/1:3,7:10:17.84:290,0,18
chr10	24073303	.	CTA	C	196.51	PASS	AB=0.972;AC=12;AF=0.400;AN=30;BaseQRankSum=4.998;DP=368;FS=4.456;HRun=0;HaplotypeScore=94.0064;InbreedingCoeff=0.1078;MQ=59.14;MQ0=15;MQRankSum=-3.520;QD=1.32;ReadPosRankSum=2.076;VQSLOD=1.4272;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:6,1:7:3.01:0,3,36	0/1:25,2:14:55.36:55,0,196	0/1:36,0:17:22.32:22,0,98	./.	./.	./.	1/1:8,2:3:2.87:43,3,0	./.	0/0:22,0:21:53.29:0,53,556	0/0:21,0:21:3.01:0,3,30	./.	0/0:10,0:9:3:0,3,28	./.	0/0:12,0:12:30.10:0,30,501	0/0:13,0:13:36.12:0,36,603	1/1:13,0:8:2.49:6,2,0	./.	1/1:4,0:3:2.94:18,3,0	0/0:19,0:19:2.91:0,3,19	./.	./.	./.	./.	./.	0/1:22,1:22:31.51:74,0,32	0/1:26,0:26:31.66:32,0,51	1/1:10,0:9:9.33:60,9,0
chr10	24073391	.	CTATA	C	297.76	PASS	AB=1.000;AC=5;AF=0.179;AN=28;BaseQRankSum=0.503;DP=173;FS=39.032;HRun=0;HaplotypeScore=35.6210;InbreedingCoeff=0.4965;MQ=24.32;MQ0=72;MQRankSum=0.503;QD=8.27;ReadPosRankSum=-3.298;VQSLOD=-0.1313;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:3:2.09:0,2,6	./.	./.	./.	0/0:2,0:2:2.84:0,3,14	./.	./.	1/1:19,10:13:32.52:371,33,0	./.	0/0:10,0:7:15.05:0,15,307	./.	./.	./.	0/1:4,0:3:0.11:0,0,0	0/0:1,0:1:3.01:0,3,65	0/0:2,0:2:3.01:0,3,65	0/0:27,0:11:8.88:0,9,188	0/0:13,0:4:6.80:0,7,131	1/1:3,0:1:2.98:21,3,0	0/0:5,0:5:12.04:0,12,238	./.	./.	./.	./.	./.	0/0:8,0:5:10.28:0,10,188	0/0:7,0:3:8.82:0,9,135	0/0:15,0:9:15.05:0,15,303
chr10	24073481	.	ATCTATATC	A	1054.47	PASS	AB=0.923;AC=26;AF=0.722;AN=36;BaseQRankSum=2.186;DP=144;FS=1.841;HRun=0;HaplotypeScore=61.5458;InbreedingCoeff=0.4745;MQ=61.46;MQ0=32;MQRankSum=-2.459;QD=13.35;ReadPosRankSum=1.015;VQSLOD=1.4989;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:12,0:6:0.89:2,1,0	1/1:3,0:3:6.02:89,6,0	0/1:3,0:1:0:0,0,0	0/0:13,0:8:8.20:0,8,39	1/1:8,0:7:3.01:55,3,0	./.	./.	0/0:11,0:2:3.01:0,3,80	1/1:3,0:2:2.80:13,3,0	1/1:1,4:4:9.03:243,9,0	1/1:2,4:5:3.01:55,3,0	./.	1/1:3,0:2:3.01:50,3,0	./.	0/0:4,0:4:9.03:0,9,269	./.	0/1:9,2:3:0:0,0,0	0/0:9,0:2:6.02:0,6,106	1/1:1,3:3:9.03:245,9,0	./.	./.	1/1:2,0:2:2.99:23,3,0	./.	./.	./.	1/1:3,0:3:8.96:96,9,0	1/1:13,0:10:20.96:245,21,0	1/1:2,0:1:3.01:54,3,0
chr10	24073489	.	C	CTA	1837.52	PASS	AB=1.000;AC=39;AF=0.780;AN=50;BaseQRankSum=2.545;DP=171;FS=0.000;HRun=0;HaplotypeScore=65.1251;InbreedingCoeff=0.2419;MQ=66.61;MQ0=18;MQRankSum=-1.716;QD=12.85;ReadPosRankSum=-0.617;VQSLOD=3.1629;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,2:8:1.09:3,1,0	1/1:3,2:5:10.85:160,11,0	0/0:4,0:2:3.01:0,3,30	0/1:18,0:10:10.47:10,0,17	1/1:3,6:8:3:51,3,0	./.	1/1:0,1:1:3.01:30,3,0	0/1:17,0:9:20.28:210,0,20	1/1:0,2:2:3.01:36,3,0	1/1:6,2:7:18.06:244,18,0	1/1:5,0:5:3.01:55,3,0	1/1:0,3:3:3:29,3,0	1/1:1,1:2:3.01:50,3,0	1/1:0,3:3:3.01:30,3,0	0/0:5,0:5:12.04:0,12,172	0/0:2,0:2:3.01:0,3,42	0/0:6,1:3:0:0,0,0	0/1:11,0:5:3.38:3,0,57	1/1:3,1:4:12.04:167,12,0	./.	./.	1/1:1,2:3:6:73,6,0	1/1:2,2:4:3:29,3,0	1/1:2,0:2:1.82:5,2,0	1/1:5,8:13:9.03:133,9,0	1/1:3,2:5:15.03:227,15,0	1/1:3,10:11:21.07:372,21,0	1/1:2,0:1:3.01:50,3,0
chr10	24073511	.	CTATA	C	5316.21	PASS	AB=1.000;AC=47;AF=0.839;AN=56;BaseQRankSum=-1.443;DP=289;FS=8.872;HRun=0;HaplotypeScore=92.6450;InbreedingCoeff=0.6248;MQ=73.66;MQ0=12;MQRankSum=-2.943;QD=21.61;ReadPosRankSum=2.291;VQSLOD=3.7091;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:9:3.48:11,3,0	1/1:5,2:7:11.53:159,12,0	0/0:6,0:4:8.85:0,9,150	0/0:24,0:16:19.17:0,19,226	1/1:6,6:12:9.03:154,9,0	1/1:6,3:9:6.02:106,6,0	1/1:5,1:6:9.02:134,9,0	1/1:25,0:23:7.02:731,7,0	1/1:5,2:6:6.02:88,6,0	1/1:16,5:21:60.20:999,60,0	1/1:5,4:9:8.70:97,9,0	1/1:8,3:9:9.02:133,9,0	1/1:7,1:7:14.54:205,15,0	1/1:5,3:8:12.03:186,12,0	0/0:8,0:8:24.05:0,24,505	0/0:4,0:4:9.03:0,9,170	1/1:8,2:8:6.01:105,6,0	1/1:7,0:6:11.57:99,12,0	1/1:5,3:8:21.07:352,21,0	1/1:5,2:7:5.09:132,5,0	0/1:4,0:3:0.93:48,0,1	1/1:5,2:7:15.04:232,15,0	1/1:7,2:9:9.02:114,9,0	1/1:6,0:5:2.60:10,3,0	1/1:9,8:17:17.72:223,18,0	1/1:9,2:11:29.63:435,30,0	1/1:9,10:18:26.76:408,27,0	1/1:5,0:5:12.04:155,12,0
chr10	24073515	.	A	ATC	7165.96	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-3.628;DP=310;FS=13.890;HRun=0;HaplotypeScore=84.1205;InbreedingCoeff=0.6783;MQ=74.25;MQ0=10;MQRankSum=-4.271;QD=27.14;ReadPosRankSum=2.782;VQSLOD=5.4671;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,9:10:3.01:58,3,0	1/1:2,5:7:12.04:226,12,0	0/0:7,0:5:11.99:0,12,138	0/0:25,0:16:16.45:0,16,178	1/1:6,8:14:9.03:168,9,0	1/1:3,6:9:6.02:112,6,0	1/1:1,6:7:9.03:170,9,0	1/1:1,26:25:72.20:1266,72,0	1/1:3,4:7:6.02:114,6,0	1/1:6,16:22:60.21:1105,60,0	1/1:4,5:9:9.03:172,9,0	1/1:5,7:10:9.03:170,9,0	1/1:2,6:8:15.05:269,15,0	1/1:3,5:8:12.04:226,12,0	0/0:9,0:9:24.05:0,24,342	0/0:5,0:5:12.03:0,12,163	1/1:5,6:9:6:112,6,0	1/1:1,5:6:12.04:228,12,0	1/1:4,4:8:21.07:384,21,0	1/1:3,5:8:9.03:168,9,0	1/1:1,4:4:3.01:56,3,0	1/1:2,6:8:15.05:282,15,0	1/1:3,8:11:9.03:172,9,0	1/1:1,6:6:3.01:58,3,0	1/1:8,9:17:18.06:343,18,0	1/1:3,9:13:33.10:586,33,0	1/1:11,8:19:27.09:497,27,0	1/1:0,5:5:12.04:225,12,0
chr10	24074224	.	TTGG	T	50.77	PASS	AB=0.765;AC=1;AF=0.018;AN=56;BaseQRankSum=2.639;DP=425;FS=5.248;HRun=0;HaplotypeScore=88.0953;InbreedingCoeff=-0.0190;MQ=75.79;MQ0=0;MQRankSum=-2.915;QD=3.91;ReadPosRankSum=0.625;VQSLOD=1.2765;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:27.09:0,27,638	0/0:7,0:7:21.04:0,21,405	0/0:10,0:10:24.07:0,24,512	0/0:7,0:7:21.07:0,21,462	0/0:19,0:19:57.20:0,57,1348	0/0:26,0:26:75.26:0,75,1774	0/0:12,0:12:36.12:0,36,830	0/0:34,0:34:99:0,102,2410	0/0:8,0:8:24.08:0,24,567	0/0:23,0:23:69.24:0,69,1605	0/0:23,0:23:69.24:0,69,1607	0/0:16,0:16:42.62:0,43,990	0/0:16,0:16:48.16:0,48,1126	0/0:17,0:17:51.18:0,51,1200	0/0:10,0:10:30.10:0,30,710	0/0:14,0:14:42.13:0,42,927	0/0:11,1:12:30.07:0,30,653	0/1:9,4:13:99:125,0,528	0/0:21,0:21:63.20:0,63,1443	0/0:20,0:20:60.21:0,60,1399	0/0:6,0:6:18.06:0,18,426	0/0:14,0:14:42.14:0,42,993	0/0:16,0:16:48.15:0,48,1059	0/0:9,0:9:27.09:0,27,637	0/0:14,0:14:39.13:0,39,899	0/0:13,0:13:39.13:0,39,922	0/0:23,0:22:66.23:0,66,1557	0/0:12,1:13:36.12:0,36,851
chr10	24074245	.	G	GA	12752.88	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-7.337;DP=434;FS=0.000;HRun=6;HaplotypeScore=38.4974;InbreedingCoeff=0.9670;MQ=69.83;MQ0=0;MQRankSum=-1.652;QD=32.12;ReadPosRankSum=0.057;VQSLOD=4.5832;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,8:11:17.64:199,18,0	1/1:1,6:7:18.06:226,18,0	0/0:5,0:6:14.97:0,15,139	0/0:5,0:5:7.78:0,8,55	1/1:0,14:14:42.09:511,42,0	1/1:1,24:25:69.22:868,69,0	1/1:1,9:10:27.09:340,27,0	1/1:5,32:37:99:1211,99,0	1/1:1,9:10:21.07:264,21,0	1/1:7,16:23:51.13:613,51,0	1/1:4,21:25:60.19:755,60,0	1/1:1,14:15:39.12:491,39,0	1/1:3,16:19:45.14:562,45,0	1/1:1,14:15:42.13:528,42,0	0/0:14,0:14:42.09:0,42,428	0/0:12,0:12:33.07:0,33,337	1/1:1,12:13:36.12:452,36,0	1/1:2,13:15:33.11:412,33,0	1/1:5,19:24:54.12:639,54,0	1/1:0,23:24:66.18:812,66,0	1/1:1,9:10:24.08:302,24,0	1/1:0,11:11:33.07:398,33,0	1/1:2,12:14:36.12:453,36,0	1/1:0,10:10:30.10:377,30,0	1/1:0,11:11:33.11:415,33,0	1/1:1,16:17:48.15:602,48,0	1/1:0,22:21:60.19:755,60,0	1/1:0,15:15:45.14:566,45,0
chr10	24074766	.	A	AT	474.49	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=-1.093;DP=517;FS=2.979;HRun=9;HaplotypeScore=87.3525;InbreedingCoeff=0.6144;MQ=80.74;MQ0=0;MQRankSum=-2.199;QD=18.98;ReadPosRankSum=-1.221;VQSLOD=3.5066;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,16:18:51.14:564,51,0	0/0:6,0:6:17.99:0,18,154	0/0:20,0:20:23.02:0,23,191	0/0:13,0:14:27.31:0,27,244	0/0:20,0:20:53.96:0,54,465	0/0:31,0:31:71.93:0,72,613	0/0:12,0:12:26.96:0,27,229	0/0:26,0:26:68.97:0,69,594	0/0:15,0:15:41.97:0,42,360	0/0:24,0:24:56.96:0,57,493	0/0:14,0:14:32.99:0,33,286	0/0:13,0:13:38.99:0,39,339	0/0:18,0:18:53.99:0,54,469	0/0:25,0:25:65.95:0,66,569	0/0:16,0:16:41.97:0,42,365	0/0:16,0:16:47.98:0,48,415	0/0:17,0:17:38.96:0,39,339	0/0:5,0:5:7.54:0,8,56	0/0:16,0:16:38.98:0,39,339	0/0:29,1:30:50.79:0,51,666	0/0:30,0:30:86.97:0,87,751	0/0:23,0:23:56.99:0,57,495	0/0:22,0:22:56.95:0,57,489	0/0:18,0:18:50.99:0,51,443	0/0:17,0:17:44.99:0,45,391	0/0:17,0:17:41.96:0,42,362	0/0:27,0:27:68.96:0,69,595	0/1:7,0:7:14.95:15,0,112
chr10	24075379	.	A	AT	6186.56	PASS	AC=14;AF=0.259;AN=54;BaseQRankSum=-14.221;DP=591;FS=2.519;HRun=2;HaplotypeScore=48.9353;InbreedingCoeff=0.9788;MQ=57.26;MQ0=22;MQRankSum=0.970;QD=38.43;ReadPosRankSum=-0.005;VQSLOD=5.1098;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:63.20:0,63,780	0/0:13,0:13:39.09:0,39,457	./.	0/0:16,0:3:5.98:0,6,48	0/0:25,0:25:72.21:0,72,878	0/0:28,0:28:81.24:0,81,990	0/0:21,0:21:63.20:0,63,780	0/0:26,0:25:72.22:0,72,880	0/0:14,0:14:42.11:0,42,499	1/1:2,30:32:90.30:1295,90,0	1/1:0,21:21:57.11:770,57,0	0/0:11,0:11:33.10:0,33,408	0/0:16,0:16:48.14:0,48,578	0/0:17,0:17:45.13:0,45,545	0/0:30,0:30:84.24:0,84,1027	0/0:18,0:18:54.14:0,54,644	1/1:2,18:20:48.16:691,48,0	1/1:0,14:14:36.59:518,37,0	1/1:0,28:27:78.25:1106,78,0	1/1:0,37:37:99:1462,105,0	1/1:0,9:9:24.08:345,24,0	0/0:23,0:23:66.18:0,66,792	0/0:23,0:23:66.19:0,66,804	0/0:12,0:12:36.09:0,36,431	0/0:26,0:26:78.23:0,78,943	0/0:26,0:26:78.23:0,78,945	0/0:39,0:39:99:0,117,1423	0/0:7,0:7:17.98:0,18,179
chr10	24075706	.	A	AC	12528.60	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=-12.488;DP=605;FS=6.508;HRun=1;HaplotypeScore=57.8898;InbreedingCoeff=0.9994;MQ=82.26;MQ0=0;MQRankSum=-1.950;QD=35.80;ReadPosRankSum=3.632;VQSLOD=5.0446;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:36.11:0,36,451	1/1:0,9:9:24.08:333,24,0	0/0:20,0:20:48.14:0,48,581	0/0:23,0:23:59.19:0,59,694	1/1:0,23:24:71.96:912,72,0	1/1:1,32:33:81.27:1145,81,0	1/1:2,11:13:36.12:497,36,0	1/1:1,33:34:99:1265,99,0	1/1:3,22:26:27.49:833,27,0	0/0:30,0:30:87.28:0,87,1127	0/0:24,0:24:69.22:0,69,891	1/1:0,20:20:51.17:721,51,0	1/1:1,27:28:75.25:1061,75,0	1/1:0,18:18:48.16:679,48,0	0/0:31,0:31:87.23:0,87,1069	0/0:21,0:21:63.19:0,63,800	0/0:16,0:16:48.16:0,48,618	0/0:13,0:13:36.10:0,36,448	0/0:19,0:19:54.18:0,54,699	0/0:29,0:29:87.12:0,87,1033	0/0:16,0:16:48.16:0,48,619	1/1:0,20:20:54.04:711,54,0	1/1:1,20:21:48.16:679,48,0	1/1:0,23:23:54.18:764,54,0	1/1:1,21:22:51.17:722,51,0	1/1:5,23:28:42.44:1020,42,0	1/1:1,18:19:57.17:787,57,0	1/1:2,10:12:29.85:401,30,0
chr10	24075766	.	A	AT	1674.12	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=0.283;DP=562;FS=0.000;HRun=8;HaplotypeScore=80.9654;InbreedingCoeff=0.9630;MQ=76.75;MQ0=0;MQRankSum=-2.698;QD=27.44;ReadPosRankSum=1.104;VQSLOD=3.9449;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:38.94:0,39,347	0/0:5,0:5:14.93:0,15,126	0/0:14,0:14:26.89:0,27,226	0/0:10,0:11:22:0,22,159	0/0:30,0:30:78.04:0,78,714	0/0:21,0:21:45.01:0,45,407	0/0:10,0:10:30:0,30,269	0/0:29,0:29:69.01:0,69,623	0/0:19,0:19:51.03:0,51,467	0/0:26,0:26:75.04:0,75,684	0/0:37,0:37:99:0,108,973	0/0:15,0:15:27.01:0,27,247	0/0:19,0:19:47.98:0,48,425	0/0:15,0:15:39.01:0,39,352	0/0:22,0:22:53.96:0,54,482	0/0:24,0:24:69.02:0,69,627	0/0:21,0:21:42.01:0,42,384	0/0:9,0:9:21:0,21,192	0/0:26,0:26:71.96:0,72,638	0/0:38,0:38:99:0,105,961	0/0:7,0:7:9:0,9,82	0/0:17,0:18:47.05:0,47,414	0/0:28,0:28:66:0,66,599	0/0:13,0:13:27.01:0,27,247	0/0:30,0:30:78.04:0,78,714	1/1:4,20:24:14.12:637,14,0	1/1:1,18:19:51.15:589,51,0	1/1:0,18:18:51.15:588,51,0
chr10	24076387	.	TTCTATGTA	T	6196.52	PASS	AB=1.000;AC=26;AF=0.481;AN=54;BaseQRankSum=2.921;DP=675;FS=15.732;HRun=0;HaplotypeScore=197.3836;InbreedingCoeff=0.8101;MQ=52.31;MQ0=5;MQRankSum=-3.818;QD=19.30;ReadPosRankSum=0.166;VQSLOD=3.2954;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:29.85:0,30,827	1/1:18,0:17:20.99:389,21,0	./.	0/0:11,0:7:9.03:0,9,148	0/1:32,0:31:45.21:341,0,45	1/1:27,0:27:47.73:694,48,0	1/1:14,0:13:14.88:145,15,0	1/1:21,13:34:39.07:570,39,0	1/1:16,0:16:41.55:596,42,0	0/0:24,0:24:48.16:0,48,1310	0/0:27,0:27:48.16:0,48,1251	1/1:29,0:29:28.18:444,28,0	1/1:29,0:28:26.39:472,26,0	1/1:17,0:15:17.69:361,18,0	0/0:33,0:33:81.28:0,81,2172	0/0:33,0:33:63.21:0,63,1737	0/0:9,0:9:21.05:0,21,449	0/1:19,0:18:40.52:41,0,578	0/0:16,0:16:21.07:0,21,680	0/0:36,0:36:75.24:0,75,1868	0/0:23,0:21:42.14:0,42,967	1/1:19,0:19:26.35:530,26,0	1/1:27,0:27:14.58:589,15,0	1/1:7,0:7:2.99:23,3,0	1/1:33,0:31:56.20:1002,56,0	0/0:31,0:31:72.25:0,72,1926	0/0:38,0:35:74.88:0,75,1927	0/0:25,0:23:48.16:0,48,1216
chr10	24076455	.	ATCTG	A	2154.45	PASS	AB=0.967;AC=20;AF=0.357;AN=56;BaseQRankSum=6.369;DP=735;FS=2.333;HRun=0;HaplotypeScore=194.2888;InbreedingCoeff=0.3494;MQ=45.96;MQ0=6;MQRankSum=-3.718;QD=5.87;ReadPosRankSum=-5.241;VQSLOD=1.4759;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:30:9.56:198,0,10	0/1:16,0:13:0.15:0,0,20	0/0:24,0:11:25.38:0,25,240	0/0:7,0:4:8.96:0,9,73	0/0:47,0:45:79.21:0,79,786	0/0:33,0:30:36.45:0,36,356	0/0:16,0:14:10.89:0,11,192	0/1:51,0:50:98.22:98,0,670	0/0:26,0:25:7.94:0,8,356	0/1:30,0:30:99:202,0,189	0/1:27,0:27:30.91:77,0,31	0/1:34,0:33:5.20:5,0,216	0/0:28,0:26:38.95:0,39,355	0/0:29,0:26:37.97:0,38,388	0/0:27,0:27:72.14:0,72,1538	0/0:21,0:21:60.05:0,60,1045	1/1:13,0:13:13.16:80,13,0	1/1:21,0:18:0.84:110,1,0	1/1:16,3:18:22.04:356,22,0	1/1:28,4:32:18.73:366,19,0	1/1:16,1:15:23.93:210,24,0	0/0:31,0:30:35.98:0,36,363	0/0:33,0:33:56.94:0,57,587	0/0:9,0:9:5.95:0,6,44	0/0:37,0:35:39.05:0,39,529	0/1:29,5:33:99:364,0,556	0/1:29,4:31:99:139,0,362	1/1:8,1:8:17.76:133,18,0
chr10	24076459	.	GTCTA	G	2437.42	PASS	AB=0.921;AC=14;AF=0.250;AN=56;BaseQRankSum=3.238;DP=728;FS=0.964;HRun=0;HaplotypeScore=192.0216;InbreedingCoeff=0.3849;MQ=46.70;MQ0=5;MQRankSum=-0.591;QD=9.56;ReadPosRankSum=-0.248;VQSLOD=2.9280;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:29:74.29:274,0,74	0/0:16,0:13:5.75:0,6,63	0/0:23,0:12:33.49:0,33,516	0/0:6,0:4:9.03:0,9,148	0/0:48,0:46:83.53:0,84,1408	0/0:34,0:31:39.60:0,40,694	0/0:16,0:15:27.72:0,28,431	0/0:54,0:53:99:0,117,1683	0/0:26,0:25:37.01:0,37,683	0/1:29,2:31:99:568,0,280	0/1:9,21:30:27.74:28,0,64	0/0:34,0:33:24.67:0,25,443	0/0:27,0:26:42.53:0,43,710	0/0:30,0:27:39.22:0,39,701	0/0:24,0:24:69.24:0,69,1575	0/0:20,0:20:48.16:0,48,1059	1/1:13,0:13:24.02:240,24,0	0/1:19,0:16:79.10:176,0,79	1/1:18,0:17:34.73:383,35,0	1/1:32,0:32:37.20:542,37,0	1/1:16,0:14:18.04:254,18,0	0/0:28,0:27:39.13:0,39,704	0/0:32,0:32:60.19:0,60,1056	0/0:10,0:10:9.03:0,9,135	0/0:37,0:35:45.10:0,45,886	0/1:33,0:32:99:134,0,1002	0/1:33,0:31:14.46:14,0,732	0/0:8,0:7:2.04:0,2,6
chr10	24076474	.	TGTC	T	300.02	PASS	AB=0.916;AC=5;AF=0.089;AN=56;BaseQRankSum=6.858;DP=708;FS=10.634;HRun=0;HaplotypeScore=157.1187;InbreedingCoeff=-0.1255;MQ=50.59;MQ0=2;MQRankSum=-5.239;QD=2.91;ReadPosRankSum=-4.168;VQSLOD=0.5073;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:26:7.04:0,7,344	0/1:6,7:10:31.77:32,0,68	0/0:26,0:15:45.15:0,45,1008	0/0:6,0:5:9.03:0,9,193	0/0:48,0:46:99:0,108,2513	0/0:31,3:31:48.16:0,48,1156	0/0:20,1:20:1.25:0,1,799	0/0:41,0:41:99:0,123,2803	0/0:23,2:24:6.26:0,6,1020	0/0:29,0:29:43.40:0,43,560	0/0:27,1:28:12.01:0,12,172	0/0:22,7:28:33.11:0,33,789	0/0:29,2:30:54.65:0,55,1306	0/0:26,3:26:41.92:0,42,1026	0/0:29,0:29:87.23:0,87,1925	0/0:21,0:21:63.18:0,63,1475	0/0:15,0:15:32.29:0,32,402	0/1:12,1:11:34.90:35,0,102	0/1:15,0:14:99:142,0,344	0/1:31,0:31:4.13:4,0,631	0/0:15,1:14:26.84:0,27,335	0/0:26,6:31:51.17:0,51,1174	0/0:31,0:31:69.23:0,69,1640	0/0:9,1:10:9.03:0,9,222	0/0:39,3:40:71.44:0,71,1706	0/1:31,0:30:99:198,0,1425	0/0:30,0:28:1.81:0,2,1255	0/0:5,0:5:12.01:0,12,243
chr10	24076554	.	CA	C	10614.17	PASS	AB=0.571;AC=31;AF=0.554;AN=56;BaseQRankSum=12.060;DP=605;FS=2.683;HRun=5;HaplotypeScore=67.0705;InbreedingCoeff=0.9559;MQ=74.51;MQ0=0;MQRankSum=-1.532;QD=28.53;ReadPosRankSum=1.549;VQSLOD=5.3632;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:42.10:0,42,553	1/1:0,11:11:33.09:374,33,0	0/0:15,0:15:45.12:0,45,556	0/0:12,0:13:28.31:0,28,366	1/1:2,37:39:99:1225,108,0	1/1:1,21:22:48.14:544,48,0	1/1:1,15:15:39.11:442,39,0	1/1:6,36:42:96.25:1079,96,0	1/1:1,16:17:42.12:476,42,0	0/0:23,0:23:66.22:0,66,898	0/0:24,0:24:63.12:0,63,819	1/1:0,29:28:66.19:748,66,0	1/1:1,26:27:66.19:748,66,0	1/1:0,24:22:48.14:544,48,0	0/0:23,0:23:69.23:0,69,944	0/0:23,0:23:69.23:0,69,944	0/0:18,0:18:51.09:0,51,656	0/0:11,0:11:27.05:0,27,348	0/0:25,0:25:69.21:0,69,914	0/0:32,0:32:93.31:0,93,1272	0/0:10,0:10:27.09:0,27,369	1/1:1,20:21:57.16:647,57,0	1/1:2,20:22:60.17:681,60,0	0/1:1,3:4:1.76:59,0,2	1/1:2,27:29:81.23:919,81,0	1/1:1,27:28:40.24:833,40,0	1/1:0,32:32:87.25:986,87,0	1/1:0,9:9:27.08:306,27,0
chr10	24077534	.	AC	A	19733.68	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=9.860;DP=644;FS=3.554;HRun=3;HaplotypeScore=124.3234;InbreedingCoeff=0.9977;MQ=80.31;MQ0=0;MQRankSum=-5.559;QD=34.56;ReadPosRankSum=1.645;VQSLOD=4.0521;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,44:45:99:1450,117,0	1/1:0,8:8:24.08:298,24,0	0/0:16,0:16:39.10:0,39,529	0/0:15,0:15:29.58:0,30,535	1/1:0,24:24:63.20:781,63,0	1/1:0,31:31:90.28:1116,90,0	1/1:0,20:20:60.19:744,60,0	1/1:1,35:36:99:1239,102,0	1/1:0,23:23:69.22:855,69,0	1/1:1,16:17:48.15:595,48,0	1/1:2,18:20:51.16:632,51,0	1/1:0,24:24:72.23:893,72,0	1/1:0,21:21:63.20:781,63,0	1/1:0,24:24:69.22:855,69,0	0/0:21,0:21:63.20:0,63,891	0/0:20,1:21:26.01:0,26,827	1/1:1,32:33:87.27:1079,87,0	1/1:0,7:7:21.07:260,21,0	1/1:0,30:30:90.25:1090,90,0	1/1:1,28:29:75.24:930,75,0	1/1:2,35:37:99:1265,102,0	1/1:0,12:12:36.11:446,36,0	1/1:1,19:20:54.17:670,54,0	1/1:0,22:22:54.17:670,54,0	1/1:1,19:20:51.16:632,51,0	1/1:0,31:31:93.29:1153,93,0	1/1:1,20:21:60.19:744,60,0	1/1:0,16:16:45.14:558,45,0
chr10	24078252	.	T	TTC	1967.05	PASS	AB=0.967;AC=37;AF=0.740;AN=50;BaseQRankSum=-2.434;DP=612;FS=1.074;HRun=0;HaplotypeScore=128.4810;InbreedingCoeff=0.1963;MQ=56.72;MQ0=10;MQRankSum=1.379;QD=4.16;ReadPosRankSum=-3.032;VQSLOD=2.3104;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:4.84:0,5,44	0/1:11,0:12:34.18:68,0,34	./.	./.	0/1:19,0:19:0.01:0,0,0	1/1:25,5:32:9.03:132,9,0	1/1:22,4:26:3.48:45,3,0	1/1:22,0:21:1.25:3,1,0	0/1:15,0:16:2.11:79,0,2	1/1:26,0:26:9.02:99,9,0	1/1:12,5:18:6.02:88,6,0	0/1:20,0:21:16.95:83,0,17	0/1:21,2:24:32.06:32,0,82	0/1:24,0:24:25.69:37,0,26	0/0:26,0:29:14.01:0,14,66	0/0:14,0:17:8.52:0,9,42	1/1:22,0:23:27.03:299,27,0	1/1:10,0:10:8.33:52,8,0	1/1:20,0:19:11.95:113,12,0	1/1:23,1:24:9.01:111,9,0	1/1:38,0:38:21:200,21,0	./.	1/1:17,3:20:3.01:44,3,0	1/1:23,2:26:18.02:220,18,0	0/1:22,0:22:26.03:31,0,26	1/1:18,4:22:16.71:175,17,0	1/1:17,0:18:14.97:141,15,0	1/1:8,0:8:6.01:62,6,0
chr10	24078377	.	CTACACACA	C	1453.71	PASS	AB=0.934;AC=15;AF=0.268;AN=56;BaseQRankSum=10.268;DP=538;FS=13.940;HRun=0;HaplotypeScore=159.0319;InbreedingCoeff=-0.3519;MQ=57.92;MQ0=7;MQRankSum=-6.167;QD=6.24;ReadPosRankSum=1.586;VQSLOD=1.5215;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:9,0:13:13.76:14,0,46	0/1:8,4:12:40.20:40,0,101	0/0:39,0:20:53.11:0,53,593	0/0:40,0:20:46.03:0,46,502	0/1:20,0:20:57.86:58,0,211	0/1:15,0:15:68.32:68,0,126	0/1:13,0:13:3.52:4,0,193	0/0:22,0:21:62.97:0,63,611	0/1:14,0:14:99:158,0,174	0/0:18,0:18:53.10:0,53,686	0/0:20,0:20:56.66:0,57,820	0/1:15,0:16:99:193,0,133	0/1:13,5:18:41.58:403,0,42	0/1:16,0:16:35.70:36,0,162	0/0:19,0:19:39.31:0,39,611	0/0:21,0:21:39.10:0,39,1129	0/0:18,0:18:40.51:0,41,649	0/0:16,0:14:32.44:0,32,553	0/0:19,0:17:48.03:0,48,722	0/0:31,0:31:80.82:0,81,1451	0/0:20,0:20:45.09:0,45,868	0/0:22,0:22:26.96:0,27,223	0/1:21,0:21:33.32:33,0,223	0/1:13,4:17:99:139,0,145	0/1:24,0:25:99:100,0,210	0/1:16,0:16:99:183,0,228	0/1:11,0:11:90.23:168,0,90	0/1:5,0:6:12.88:13,0,22
chr10	24078378	.	T	TAC	166.01	PASS	AB=0.908;AC=6;AF=0.130;AN=46;BaseQRankSum=-3.456;DP=548;FS=5.471;HRun=0;HaplotypeScore=125.8432;InbreedingCoeff=-0.0343;MQ=55.50;MQ0=8;MQRankSum=3.132;QD=1.33;ReadPosRankSum=1.581;VQSLOD=2.2317;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:0:0,0,0	0/0:12,0:12:2.71:0,3,14	./.	./.	0/1:21,0:21:10:10,0,26	0/0:15,0:15:5.68:0,6,28	./.	./.	0/0:14,0:14:11.53:0,12,74	0/1:18,0:18:12.37:12,0,19	0/0:22,0:22:19.84:0,20,96	0/0:17,0:17:16.35:0,16,110	0/0:19,0:19:28.53:0,29,172	0/0:16,0:17:3:0,3,31	0/1:12,7:21:23.36:80,0,23	0/1:16,7:24:46.75:160,0,47	0/0:18,0:18:15.09:0,15,72	0/0:18,0:16:12.07:0,12,74	0/0:19,0:16:14.27:0,14,87	0/0:32,0:32:3.77:0,4,97	0/1:20,0:20:5.64:6,0,50	0/1:21,0:21:0:0,0,0	0/0:22,0:22:2.55:0,3,14	0/0:17,0:17:8.60:0,9,45	0/0:26,0:26:10.70:0,11,83	0/0:16,0:16:14.37:0,14,87	0/0:9,0:9:8.52:0,9,42	./.
chr10	24078415	.	ACACACACT	A	3185.58	PASS	AB=0.958;AC=25;AF=0.446;AN=56;BaseQRankSum=3.481;DP=578;FS=3.241;HRun=0;HaplotypeScore=171.9051;InbreedingCoeff=0.5668;MQ=50.06;MQ0=22;MQRankSum=-4.777;QD=12.90;ReadPosRankSum=1.818;VQSLOD=2.9639;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:2.83:0,3,29	1/1:14,0:14:3:75,3,0	0/0:37,0:6:8.16:0,8,103	0/0:37,0:12:32.98:0,33,339	1/1:19,0:18:12.51:229,13,0	1/1:19,4:23:5.70:139,6,0	1/1:16,0:15:17.33:158,17,0	0/1:23,0:21:3.50:40,0,3	1/1:8,0:8:14.46:265,14,0	0/0:17,0:17:24.05:0,24,326	0/0:27,0:27:35.64:0,36,456	0/1:18,0:18:3.91:390,0,4	1/1:21,0:21:20.75:589,21,0	1/1:11,0:11:14.99:173,15,0	0/0:26,0:26:32.16:0,32,693	0/0:29,0:29:56.84:0,57,1179	0/0:20,0:19:5.36:0,5,359	0/0:21,0:20:33.77:0,34,461	0/0:12,0:11:21.06:0,21,406	0/0:28,0:28:53.05:0,53,586	0/0:35,0:34:53.61:0,54,707	0/0:17,6:23:0.28:0,0,2	1/1:9,4:13:5.45:89,5,0	0/1:19,0:19:35.77:159,0,36	1/1:24,0:24:30.23:377,30,0	0/1:14,5:19:15.18:375,0,15	1/1:15,0:15:10.07:282,10,0	0/1:4,0:4:1.62:36,0,2
chr10	24078416	.	CACACACT	C	1399.65	PASS	AB=0.854;AC=14;AF=0.250;AN=56;BaseQRankSum=10.364;DP=583;FS=15.672;HRun=0;HaplotypeScore=169.3800;InbreedingCoeff=-0.3241;MQ=50.48;MQ0=22;MQRankSum=-4.694;QD=6.19;ReadPosRankSum=4.245;VQSLOD=0.9703;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:19:15.19:0,15,92	0/1:11,3:14:36.74:37,0,98	0/0:38,0:7:20.91:0,21,276	0/0:37,0:12:33.11:0,33,526	0/1:18,2:19:99:118,0,108	0/1:23,1:24:67.28:67,0,193	0/1:15,1:15:0.02:0,0,165	0/0:22,0:20:32.99:0,33,280	0/1:5,3:8:52.44:131,0,52	0/0:18,0:18:50:0,50,503	0/0:27,0:27:56.47:0,56,690	0/1:13,5:18:99:202,0,151	0/1:13,8:21:99:352,0,110	0/1:9,2:11:31.42:31,0,56	0/0:27,0:27:45.61:0,46,955	0/0:29,0:29:54.18:0,54,1365	0/0:20,0:19:44.43:0,44,542	0/0:20,0:19:4.07:0,4,434	0/0:13,0:12:35.47:0,35,475	0/0:28,0:28:64.53:0,65,714	0/0:36,0:35:77.56:0,78,940	0/0:18,4:23:17.37:0,17,103	0/1:8,5:13:20.23:40,0,20	0/1:17,2:19:67.98:68,0,103	0/1:19,5:24:79.82:148,0,80	0/1:18,1:19:99:190,0,158	0/1:12,3:15:99:155,0,135	0/1:4,0:4:11.37:11,0,25
chr10	24078419	.	ACACT	A	1092.63	PASS	AB=0.986;AC=23;AF=0.411;AN=56;BaseQRankSum=6.556;DP=581;FS=29.091;HRun=0;HaplotypeScore=146.1554;InbreedingCoeff=-0.0836;MQ=51.08;MQ0=21;MQRankSum=-4.009;QD=3.33;ReadPosRankSum=-0.055;VQSLOD=0.6804;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:2.47:0,2,23	1/1:15,0:15:3:28,3,0	0/0:38,0:7:11.17:0,11,141	0/0:39,0:14:29.13:0,29,297	1/1:20,0:19:0.94:29,1,0	1/1:25,0:25:4.24:53,4,0	0/0:15,0:14:0.41:0,0,43	0/0:26,0:24:2.57:0,3,10	0/1:9,0:9:15.73:88,0,16	0/0:16,0:16:1.52:0,2,5	0/1:23,1:24:68.43:86,0,68	0/1:18,0:18:74.64:87,0,75	0/1:21,0:21:40.74:187,0,41	0/0:11,0:11:7.17:0,7,54	0/0:28,0:28:32.87:0,33,506	0/0:28,0:28:43.68:0,44,723	0/1:19,0:18:2.86:3,0,56	0/1:20,0:19:31.91:71,0,32	0/1:14,0:13:23.76:24,0,135	0/1:19,2:21:23.80:188,0,24	0/1:33,1:34:39.32:39,0,120	0/0:28,0:28:2.88:0,3,27	1/1:13,0:13:2.87:28,3,0	0/1:20,0:20:13.98:46,0,14	1/1:21,0:21:3.72:86,4,0	1/1:19,0:19:5.80:128,6,0	0/1:15,0:15:16.28:72,0,16	0/0:5,0:5:0.21:0,0,1
chr10	24078421	.	ACT	A	1609.69	PASS	AB=0.995;AC=33;AF=0.611;AN=54;BaseQRankSum=5.384;DP=576;FS=37.299;HRun=0;HaplotypeScore=129.7835;InbreedingCoeff=0.2617;MQ=54.52;MQ0=21;MQRankSum=-2.001;QD=3.78;ReadPosRankSum=-0.775;VQSLOD=1.1227;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:18,0:18:0:0,0,0	1/1:14,0:14:2.84:14,3,0	0/0:40,0:9:14.17:0,14,172	0/0:42,0:17:25.29:0,25,291	0/1:20,0:19:10.63:11,0,13	1/1:27,0:27:4.75:27,5,0	0/1:15,0:14:1:1,0,32	0/1:26,0:25:0:0,0,0	0/1:9,0:9:20.77:46,0,21	1/1:16,1:17:9.02:107,9,0	1/1:22,2:24:20.62:224,21,0	0/1:17,0:18:61.31:61,0,63	0/1:20,0:20:48.04:101,0,48	0/0:11,0:11:8.94:0,9,69	0/0:28,0:28:35.58:0,36,405	0/0:25,0:25:36.70:0,37,475	1/1:19,0:18:18:184,18,0	1/1:18,1:18:11.89:157,12,0	0/1:14,0:13:23.58:114,0,24	1/1:17,2:19:29.77:302,30,0	0/1:34,0:34:1.10:180,0,1	0/1:28,0:28:0.20:0,0,0	1/1:12,0:12:2.84:14,3,0	1/1:20,0:20:5.42:28,5,0	0/1:21,0:21:12.71:82,0,13	1/1:18,0:18:8.67:77,9,0	1/1:14,0:14:8.52:42,9,0	./.
chr10	24079449	.	T	TA	184.52	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=0.822;DP=265;FS=1.323;HRun=8;HaplotypeScore=60.1121;InbreedingCoeff=0.4781;MQ=84.45;MQ0=1;MQRankSum=1.667;QD=8.02;ReadPosRankSum=0.237;VQSLOD=0.7373;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,10:11:24.07:277,24,0	0/0:4,0:4:9:0,9,82	0/1:11,0:12:2.75:3,0,152	0/0:14,0:13:9.30:0,9,145	0/0:10,0:10:27.01:0,27,247	0/0:12,0:12:27.01:0,27,247	0/0:6,0:6:9:0,9,82	0/0:27,0:27:68.56:0,69,627	0/0:13,0:13:27.01:0,27,247	0/0:9,0:9:18.01:0,18,165	0/0:7,0:7:18.01:0,18,165	0/0:4,0:4:6:0,6,54	0/0:8,0:8:8.98:0,9,82	0/0:6,0:6:18:0,18,160	0/0:9,0:9:24.01:0,24,219	0/0:4,0:4:9:0,9,82	0/0:24,1:25:34.42:0,34,569	0/0:14,0:14:29.95:0,30,265	0/0:5,0:5:11.99:0,12,106	0/0:9,0:9:14.99:0,15,137	0/0:7,0:7:20.98:0,21,185	0/0:4,0:4:9:0,9,82	0/0:3,0:3:9:0,9,82	0/0:6,0:6:12:0,12,110	0/0:9,0:9:18.01:0,18,165	0/0:8,0:8:24.01:0,24,220	0/0:11,0:11:24:0,24,220	0/0:6,0:7:20.05:0,20,171
chr10	24080581	.	TTTGTGCACA	T	28751.41	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=11.455;DP=565;FS=3.386;HRun=0;HaplotypeScore=183.4295;InbreedingCoeff=0.9133;MQ=81.75;MQ0=0;MQRankSum=-13.737;QD=61.04;ReadPosRankSum=4.093;VQSLOD=4.5778;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,15:19:30.02:783,30,0	1/1:1,8:9:24.08:744,24,0	0/0:23,0:23:66.19:0,66,2514	0/0:22,0:22:60.20:0,60,2432	1/1:3,25:28:51.09:1434,51,0	1/1:4,19:23:51.18:1580,51,0	1/1:1,12:13:30.06:856,30,0	1/1:8,35:43:99:2433,102,0	1/1:3,13:16:27.07:765,27,0	1/1:2,19:21:57.17:1678,57,0	1/1:2,21:23:51.13:1507,51,0	1/1:3,12:15:36.12:1114,36,0	1/1:1,9:10:27.09:835,27,0	1/1:3,27:30:66.19:1972,66,0	0/0:25,0:25:75.24:0,75,3377	0/0:24,0:24:69.24:0,69,3308	1/1:1,12:13:21.07:651,21,0	1/1:1,6:7:9.03:279,9,0	1/1:2,16:16:48.05:1100,48,0	1/1:2,33:36:84.20:2457,84,0	1/1:0,9:9:9.03:279,9,0	1/1:1,15:16:33.11:1022,33,0	1/1:3,22:25:45.05:1320,45,0	1/1:1,13:14:12.04:372,12,0	1/1:3,24:27:48.04:1268,48,0	1/1:1,26:27:75.21:2235,75,0	1/1:3,23:26:66.19:1974,66,0	1/1:0,3:3:3.01:93,3,0
chr10	24081978	.	AT	A	6887.49	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=7.269;DP=698;FS=0.644;HRun=3;HaplotypeScore=94.9864;InbreedingCoeff=0.9228;MQ=58.45;MQ0=8;MQRankSum=-1.476;QD=31.74;ReadPosRankSum=1.989;VQSLOD=4.8003;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,33:36:89.38:1235,89,0	0/0:8,0:8:24.03:0,24,306	0/0:23,0:7:1.55:0,2,233	0/0:26,0:9:27.08:0,27,360	0/0:31,0:30:90.30:0,90,1295	0/0:29,0:28:72.24:0,72,1037	0/0:24,0:24:69.19:0,69,925	0/0:34,0:31:87.27:0,87,1204	0/0:21,0:21:60.14:0,60,802	1/1:2,31:32:68.40:1113,68,0	1/1:0,21:21:60.19:744,60,0	0/0:28,0:28:81.27:0,81,1166	0/0:28,0:28:84.22:0,84,1154	0/0:27,0:27:75.22:0,75,1051	0/0:31,0:31:93.30:0,93,1321	0/0:21,0:21:63.20:0,63,890	1/1:4,25:27:39.41:787,39,0	1/1:0,23:23:57.18:706,57,0	1/1:1,14:15:14.25:456,14,0	1/1:0,29:29:84.20:1022,84,0	1/1:3,26:29:68.43:825,68,0	0/0:33,0:33:96.29:0,96,1360	0/0:24,0:24:72.24:0,72,1037	0/0:12,0:12:36.11:0,36,500	0/0:21,0:21:60.19:0,60,847	0/0:25,2:27:0.86:0,1,919	0/0:24,0:24:69.23:0,69,992	0/0:8,0:8:24.08:0,24,345
chr10	24082202	.	A	AG	21589.49	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-4.572;DP=694;FS=4.332;HRun=1;HaplotypeScore=85.3207;InbreedingCoeff=0.9985;MQ=57.77;MQ0=3;MQRankSum=0.481;QD=35.92;ReadPosRankSum=4.244;VQSLOD=5.1029;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,59:59:99:2402,163,0	1/1:0,9:9:24.08:359,24,0	0/0:21,0:11:27.09:0,27,345	0/0:31,0:22:62.70:0,63,728	1/1:0,35:35:81.27:1214,81,0	1/1:0,27:27:69.23:1034,69,0	1/1:1,20:20:24.08:359,24,0	1/1:3,23:23:60.17:850,60,0	1/1:1,23:24:66.22:987,66,0	1/1:3,23:25:63.15:874,63,0	1/1:0,19:19:39.13:584,39,0	1/1:2,23:25:63.21:943,63,0	1/1:0,23:23:63.21:944,63,0	1/1:1,16:17:39.13:584,39,0	0/0:22,0:22:63.20:0,63,817	0/0:19,0:19:54.16:0,54,687	1/1:2,35:37:93.32:1394,93,0	1/1:2,22:24:69.23:1025,69,0	1/1:2,18:19:51.17:757,51,0	1/1:1,28:28:54.18:809,54,0	1/1:2,30:31:66.22:989,66,0	1/1:1,29:30:69.23:1033,69,0	1/1:1,22:23:51.17:763,51,0	1/1:0,27:25:63.17:919,63,0	1/1:1,18:19:51.17:764,51,0	1/1:2,18:20:57.18:835,57,0	1/1:0,17:17:45.15:674,45,0	1/1:0,11:11:33.11:494,33,0
chr10	24083302	.	A	ATATATG	8844.70	PASS	AB=1.000;AC=28;AF=0.560;AN=50;BaseQRankSum=-2.532;DP=270;FS=0.000;HRun=0;HaplotypeScore=71.6818;InbreedingCoeff=0.4585;MQ=68.60;MQ0=0;MQRankSum=-7.837;QD=46.80;ReadPosRankSum=1.706;VQSLOD=4.3403;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,8:10:15.05:522,15,0	./.	0/0:7,0:7:8.92:0,9,100	0/0:10,0:10:26.75:0,27,382	0/0:3,0:3:3:0,3,25	1/1:4,0:4:6.02:123,6,0	./.	0/1:35,0:35:99:596,0,243	1/1:4,0:4:3.48:61,3,0	1/1:3,10:15:39.12:1207,39,0	1/1:2,12:15:33.11:1140,33,0	1/1:2,0:2:0.47:1,0,0	0/1:5,0:5:15.96:56,0,16	0/0:6,0:6:8.99:0,9,75	0/0:23,0:23:60.17:0,60,1292	0/0:21,0:21:57.18:0,57,1269	1/1:4,8:14:18.06:606,18,0	1/1:3,5:9:12.04:419,12,0	1/1:3,15:21:57.16:1742,57,0	1/1:2,20:26:51.18:1771,51,0	1/1:3,4:8:9.03:301,9,0	./.	0/0:2,0:2:3:0,3,25	0/0:3,0:3:1.55:0,2,4	0/1:13,0:13:12.95:114,0,13	1/1:2,1:3:6.02:140,6,0	0/1:5,0:5:9.99:48,0,10	0/0:5,0:5:2.97:0,3,20
chr10	24083893	.	GA	G	1302.89	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.533;DP=516;FS=0.524;HRun=9;HaplotypeScore=47.8323;InbreedingCoeff=0.9452;MQ=72.89;MQ0=0;MQRankSum=-0.065;QD=21.36;ReadPosRankSum=0.521;VQSLOD=4.0711;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:45.13:0,45,519	0/0:12,0:12:33.10:0,33,381	0/0:11,0:10:18.73:0,19,224	0/0:11,0:11:21:0,21,216	0/0:38,1:39:74.44:0,74,1055	0/0:25,0:25:63.17:0,63,717	0/0:7,0:7:18.05:0,18,208	0/0:26,0:26:57.16:0,57,649	0/0:15,0:15:40.36:0,40,453	0/0:29,0:29:72.21:0,72,830	0/0:25,0:25:63.19:0,63,726	0/0:9,0:9:18.05:0,18,207	0/0:20,0:20:46.02:0,46,521	0/0:14,0:14:36.11:0,36,414	0/0:14,0:14:39.12:0,39,450	0/0:16,0:16:45.12:0,45,509	0/0:10,0:10:24.07:0,24,277	0/0:8,0:8:18.05:0,18,208	0/0:24,0:24:60.16:0,60,679	0/0:36,0:36:93.27:0,93,1063	0/0:16,0:16:42.12:0,42,485	0/0:20,0:20:57.17:0,57,657	0/0:19,0:19:51.15:0,51,589	0/0:8,0:8:18.05:0,18,206	0/0:25,0:25:66.15:0,66,730	1/1:1,22:23:34.39:559,34,0	1/1:1,34:35:90.05:824,90,0	1/1:0,3:3:6:55,6,0
chr10	24084515	.	AG	A	2543.41	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=12.649;DP=513;FS=2.833;HRun=1;HaplotypeScore=120.9420;InbreedingCoeff=0.9361;MQ=82.77;MQ0=0;MQRankSum=-13.132;QD=34.37;ReadPosRankSum=1.605;VQSLOD=3.4421;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,3:4:6.01:65,6,0	0/0:19,0:19:57.19:0,57,911	0/0:20,0:20:60.17:0,60,862	0/0:11,0:11:29.93:0,30,412	0/0:34,0:34:99:0,102,1603	0/0:39,0:39:99:0,117,1845	0/0:21,0:21:63.18:0,63,953	0/0:28,0:28:81.28:0,81,1295	0/0:10,0:10:30.10:0,30,480	1/1:1,16:17:51.16:689,51,0	1/1:0,18:18:51.99:645,52,0	0/0:14,0:14:42.14:0,42,667	0/0:19,0:19:57.19:0,57,901	0/0:15,0:15:45.15:0,45,719	0/0:29,0:29:87.30:0,87,1386	0/0:15,0:15:45.15:0,45,719	1/1:0,3:3:9:84,9,0	1/1:0,1:1:3.01:41,3,0	1/1:1,4:5:15.05:208,15,0	1/1:0,21:21:63.17:829,63,0	1/1:0,5:5:14.78:176,15,0	0/0:24,0:24:72.23:0,72,1128	0/0:21,0:21:63.20:0,63,983	0/0:17,0:17:51.17:0,51,815	0/0:22,0:22:66.22:0,66,1051	0/0:29,0:29:87.30:0,87,1392	0/0:37,0:37:99:0,111,1774	0/0:15,0:15:45.12:0,45,692
chr10	24084519	.	ATGTTACTT	A	5724.70	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=13.380;DP=522;FS=3.600;HRun=0;HaplotypeScore=186.1694;InbreedingCoeff=0.9214;MQ=81.70;MQ0=0;MQRankSum=-13.277;QD=79.51;ReadPosRankSum=2.464;VQSLOD=5.2471;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,3:3:3.01:43,3,0	0/0:21,0:21:63.22:0,63,2812	0/0:19,0:19:57.20:0,57,2267	0/0:11,0:11:30.05:0,30,956	0/0:33,0:33:99:0,99,4581	0/0:38,0:38:99:0,114,4837	0/0:22,0:22:66.23:0,66,2988	0/0:32,0:32:93.32:0,93,4137	0/0:11,0:11:33.11:0,33,1528	1/1:0,16:16:48.16:1446,48,0	1/1:0,18:18:53.55:1414,54,0	0/0:13,0:13:39.13:0,39,1680	0/0:20,0:20:60.19:0,60,2589	0/0:15,0:15:45.15:0,45,1718	0/0:31,0:31:93.32:0,93,4088	0/0:15,0:15:45.15:0,45,1929	1/1:0,3:3:9.03:180,9,0	1/1:0,1:1:3.01:90,3,0	1/1:1,4:5:12.04:362,12,0	1/1:0,21:21:63.21:1776,63,0	1/1:0,5:5:15.05:413,15,0	0/0:24,0:24:72.25:0,72,3293	0/0:20,0:20:60.21:0,60,2701	0/0:17,0:17:51.18:0,51,2289	0/0:24,0:24:72.24:0,72,3131	0/0:30,0:30:90.31:0,90,4030	0/0:38,0:38:99:0,114,5060	0/0:16,0:16:48.16:0,48,2175
chr10	24085079	.	C	CT	1577.86	PASS	AB=0.967;AC=8;AF=0.143;AN=56;BaseQRankSum=-5.845;DP=528;FS=4.997;HRun=8;HaplotypeScore=51.1301;InbreedingCoeff=0.7260;MQ=77.72;MQ0=0;MQRankSum=-1.574;QD=18.56;ReadPosRankSum=0.718;VQSLOD=3.3139;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:39.02:0,39,357	0/0:15,0:15:42.02:0,42,384	0/0:12,0:12:24.54:0,25,248	0/1:12,0:12:4.17:4,0,120	0/0:30,0:29:84.04:0,84,769	0/0:27,0:27:72.04:0,72,659	0/0:12,0:12:30.01:0,30,274	0/0:21,0:21:57.03:0,57,522	0/0:11,0:11:27.01:0,27,247	0/0:24,0:24:63.01:0,63,574	0/0:27,0:27:72.03:0,72,654	0/0:17,0:17:51.03:0,51,467	0/0:22,0:22:54.03:0,54,494	0/0:23,0:23:60.03:0,60,549	0/0:20,0:20:48.01:0,48,439	0/0:25,0:25:66.01:0,66,599	0/0:12,0:12:30.02:0,30,274	0/0:12,0:12:30.02:0,30,274	0/1:13,1:14:4.61:5,0,217	0/0:33,0:33:69.02:0,69,632	0/0:12,0:12:33.02:0,33,302	0/0:9,0:9:2.46:0,2,195	0/0:25,0:25:69.03:0,69,631	0/0:10,0:10:30.02:0,30,275	0/0:30,0:30:87.05:0,87,796	1/1:5,16:21:51.13:573,51,0	1/1:1,28:28:78.08:900,78,0	1/1:0,9:9:21.06:242,21,0
chr10	24085266	.	G	GA	13299.94	PASS	AB=1.000;AC=43;AF=0.768;AN=56;BaseQRankSum=-10.238;DP=556;FS=15.053;HRun=8;HaplotypeScore=49.6618;InbreedingCoeff=0.8884;MQ=67.50;MQ0=0;MQRankSum=-1.091;QD=28.48;ReadPosRankSum=1.002;VQSLOD=3.7737;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,13:16:39.12:450,39,0	1/1:2,2:4:6.02:69,6,0	0/0:12,0:12:22.81:0,23,194	0/1:4,0:3:9.82:10,0,45	1/1:5,27:33:84.21:954,84,0	1/1:3,29:32:75.22:866,75,0	1/1:2,11:13:27.08:312,27,0	1/1:2,35:37:99:1153,104,0	1/1:2,21:24:66.20:761,66,0	1/1:2,21:23:63.16:706,63,0	1/1:1,26:27:72.17:816,72,0	1/1:1,16:18:38.95:430,39,0	1/1:4,19:23:45.13:519,45,0	1/1:1,27:28:78.23:900,78,0	0/0:13,0:13:39.02:0,39,357	0/0:17,0:17:44.98:0,45,400	1/1:2,13:15:39.12:450,39,0	1/1:3,16:19:39.12:450,39,0	1/1:2,20:22:35.72:662,36,0	1/1:2,32:34:96.24:1093,96,0	1/1:0,12:13:35.94:395,36,0	1/1:8,13:21:36.07:401,36,0	1/1:1,24:25:63.19:727,63,0	1/1:1,13:14:39.12:450,39,0	1/1:0,22:22:63.19:727,63,0	0/0:21,0:21:63.02:0,63,570	0/0:20,0:20:57.02:0,57,517	0/0:6,0:6:18.01:0,18,165
chr10	24085749	.	G	GT	12678.89	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=5.883;DP=534;FS=0.580;HRun=9;HaplotypeScore=89.1486;InbreedingCoeff=0.9852;MQ=69.76;MQ0=0;MQRankSum=-3.199;QD=26.36;ReadPosRankSum=2.195;VQSLOD=4.7405;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,9:11:24.06:265,24,0	1/1:0,6:6:18.05:199,18,0	0/0:9,0:9:16.55:0,17,134	0/0:5,0:5:15:0,15,130	1/1:4,37:41:99:1131,105,0	1/1:2,22:24:63.17:697,63,0	1/1:1,10:12:23.90:246,24,0	1/1:11,32:43:70.16:982,70,0	1/1:1,15:16:39.11:431,39,0	1/1:1,21:22:60.16:664,60,0	1/1:7,15:23:47.92:499,48,0	1/1:3,9:12:21.06:232,21,0	1/1:3,22:25:60.16:664,60,0	1/1:2,14:16:39.11:431,39,0	0/0:22,0:22:56.98:0,57,495	0/0:16,0:16:32.96:0,33,283	1/1:2,19:22:48.10:518,48,0	1/1:7,25:33:65.97:698,66,0	1/1:1,15:16:45.12:498,45,0	1/1:1,17:18:51.14:564,51,0	1/1:0,6:6:18.05:199,18,0	1/1:2,21:24:43.03:685,43,0	1/1:3,17:20:48.13:531,48,0	1/1:0,10:10:30.08:332,30,0	1/1:1,18:20:50.97:545,51,0	1/1:3,18:21:60.07:625,60,0	1/1:3,20:23:42.62:643,43,0	1/1:4,13:17:36.10:398,36,0
chr10	24086105	.	C	CT	5746.35	PASS	AB=0.941;AC=43;AF=0.768;AN=56;BaseQRankSum=-8.023;DP=273;FS=24.187;HRun=6;HaplotypeScore=30.1144;InbreedingCoeff=0.7668;MQ=81.01;MQ0=0;MQRankSum=0.720;QD=30.09;ReadPosRankSum=1.791;VQSLOD=2.8042;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,8:8:24.07:297,24,0	1/1:0,2:2:6.02:75,6,0	0/0:16,0:11:22.22:0,22,215	0/0:14,0:10:5.73:0,6,44	1/1:1,14:15:39.12:487,39,0	1/1:2,7:9:27.06:313,27,0	1/1:1,2:3:6.02:75,6,0	1/1:2,9:11:27.09:338,27,0	1/1:1,4:5:15.05:188,15,0	1/1:0,12:12:36.10:438,36,0	1/1:0,10:10:30.10:377,30,0	1/1:0,4:4:12.04:151,12,0	1/1:0,11:11:33.11:415,33,0	1/1:0,3:3:9.03:113,9,0	0/0:11,0:11:30.05:0,30,299	0/0:9,0:9:24.05:0,24,245	1/1:3,11:14:27.09:340,27,0	1/1:0,14:14:33.11:415,33,0	1/1:1,16:17:48.15:604,48,0	1/1:2,7:9:21.07:264,21,0	1/1:0,2:2:6.02:75,6,0	1/1:0,3:3:6.02:75,6,0	1/1:1,9:10:27.09:340,27,0	1/1:1,2:3:6.02:75,6,0	1/1:1,9:10:21.07:264,21,0	0/1:15,1:16:25.51:26,0,380	0/0:14,0:13:39.07:0,39,391	0/0:18,0:18:48.09:0,48,489
chr10	24086174	.	TAC	T	398.41	PASS	AB=0.802;AC=10;AF=0.200;AN=50;BaseQRankSum=0.797;DP=125;FS=10.866;HRun=0;HaplotypeScore=31.1137;InbreedingCoeff=-0.3210;MQ=91.81;MQ0=0;MQRankSum=-2.827;QD=9.96;ReadPosRankSum=-4.429;VQSLOD=0.8348;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:3,0:3:8.99:0,9,107	./.	0/0:19,0:13:36.85:0,37,516	0/0:13,0:8:0.70:0,1,168	0/1:1,1:2:42.80:43,0,55	0/1:4,1:5:50.86:51,0,110	0/1:1,4:5:20.77:86,0,21	0/0:9,0:9:27.08:0,27,445	0/1:2,0:2:6.62:7,0,54	0/1:1,1:2:42.11:42,0,54	0/0:2,0:2:6.01:0,6,81	0/1:4,0:4:74.78:79,0,75	0/1:5,1:6:29.76:30,0,224	0/1:2,2:4:46.41:84,0,46	0/0:8,0:8:24.08:0,24,474	0/0:7,0:7:21.06:0,21,390	0/0:2,0:2:6.01:0,6,59	0/1:3,0:3:32.43:32,0,81	0/0:1,0:1:3:0,3,27	0/0:5,1:6:15.04:0,15,208	./.	0/0:2,1:3:6.01:0,6,57	0/0:3,0:3:9.01:0,9,85	./.	0/0:2,1:3:3.48:0,3,56	0/1:5,2:7:76.56:77,0,122	0/0:2,0:1:5.86:0,6,38	0/0:3,0:3:5.98:0,6,47
chr10	24086176	.	C	CCCCCCT	2687.27	PASS	AB=1.000;AC=41;AF=0.854;AN=48;BaseQRankSum=-0.132;DP=135;FS=3.682;HRun=0;HaplotypeScore=36.8193;InbreedingCoeff=0.4050;MQ=83.04;MQ0=1;MQRankSum=-5.168;QD=27.99;ReadPosRankSum=-2.566;VQSLOD=2.5344;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:19,0:11:11.50:0,12,137	0/1:14,0:9:7.93:8,0,152	1/1:2,0:2:3.01:49,3,0	1/1:7,0:7:11.98:135,12,0	1/1:6,1:7:12.04:242,12,0	1/1:9,0:9:2.98:21,3,0	1/1:2,1:3:3.01:100,3,0	1/1:2,0:2:3.01:48,3,0	./.	1/1:4,1:5:12.04:261,12,0	1/1:6,0:6:3.01:48,3,0	1/1:2,2:4:12.04:296,12,0	0/0:8,0:8:18.06:0,18,371	0/0:7,0:7:18.06:0,18,381	1/1:0,2:2:6.02:200,6,0	1/1:3,1:4:9.02:167,9,0	1/1:1,0:1:3.01:48,3,0	1/1:3,3:6:12.04:351,12,0	./.	1/1:2,2:4:9.02:225,9,0	1/1:0,2:2:6.02:198,6,0	1/1:1,0:1:3.01:47,3,0	1/1:4,0:4:3.47:27,3,0	1/1:4,1:6:12.01:210,12,0	1/1:4,0:3:6.02:86,6,0	1/1:1,0:3:3.01:59,3,0
chr10	24086248	.	TGG	T	6854.97	PASS	AB=0.538;AC=47;AF=0.839;AN=56;BaseQRankSum=-1.301;DP=321;FS=25.284;HRun=10;HaplotypeScore=52.2615;InbreedingCoeff=0.7655;MQ=65.13;MQ0=3;MQRankSum=1.685;QD=25.97;ReadPosRankSum=4.010;VQSLOD=2.6845;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,22:24:55.91:631,56,0	1/1:0,1:1:3.01:33,3,0	0/0:20,0:14:19.12:0,19,258	0/0:14,0:12:8.15:0,8,280	1/1:2,8:10:11.89:192,12,0	1/1:0,10:10:30:317,30,0	1/1:3,14:17:39.10:435,39,0	1/1:0,8:8:21.05:233,21,0	1/1:1,7:8:21.05:234,21,0	1/1:4,5:9:21.04:225,21,0	1/1:0,7:7:15.04:167,15,0	1/1:2,10:12:27.07:298,27,0	1/1:0,15:15:45.12:501,45,0	1/1:5,8:13:30.07:333,30,0	0/0:12,0:12:30.08:0,30,431	0/0:10,0:10:27.08:0,27,404	1/1:2,23:24:63.16:702,63,0	1/1:1,10:11:30.08:334,30,0	1/1:3,5:7:15.04:167,15,0	1/1:2,3:5:9.02:100,9,0	1/1:5,17:22:39.09:435,39,0	1/1:2,7:9:21.06:234,21,0	0/1:1,6:7:4.41:180,0,4	1/1:1,11:12:36.10:401,36,0	1/1:4,8:12:24.05:267,24,0	1/1:4,5:9:15.01:167,15,0	1/1:0,8:8:20.92:234,21,0	1/1:0,1:1:3.01:33,3,0
chr10	24086257	.	GGT	G	2324.97	PASS	AB=0.976;AC=38;AF=0.679;AN=56;BaseQRankSum=7.390;DP=340;FS=49.551;HRun=0;HaplotypeScore=65.5308;InbreedingCoeff=0.0185;MQ=66.16;MQ0=3;MQRankSum=1.612;QD=7.94;ReadPosRankSum=10.480;VQSLOD=0.4247;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:34,1:34:99:245,0,144	1/1:1,0:1:2.50:9,2,0	0/0:24,0:17:9.24:0,9,360	0/1:16,0:13:16.12:16,0,229	0/1:9,0:9:3.48:47,0,3	1/1:11,0:11:4.04:116,4,0	0/1:19,0:19:55.01:108,0,55	0/1:12,0:12:50.76:51,0,83	1/1:7,0:7:19.44:99,19,0	0/1:6,2:8:7.66:136,0,8	0/1:7,0:7:0.31:46,0,0	1/1:12,1:13:25.43:160,25,0	1/1:18,0:18:5.71:211,6,0	1/1:8,2:10:28.81:196,29,0	0/0:12,0:12:33.04:0,33,425	0/0:11,0:11:32.95:0,33,437	1/1:27,0:26:23.59:210,24,0	1/1:11,0:11:10.42:120,10,0	1/1:6,0:5:12.20:51,12,0	0/1:4,0:4:9.15:25,0,9	0/1:25,0:25:79.43:79,0,117	1/1:8,0:8:19.57:120,20,0	0/1:7,0:7:21.80:57,0,22	0/1:15,1:16:48.91:131,0,49	1/1:8,0:8:22.16:121,22,0	1/1:5,0:5:11.88:50,12,0	0/1:9,0:9:1.91:77,0,2	1/1:1,0:1:2.50:9,2,0
chr10	24087007	.	GT	G	18947.02	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=10.815;DP=668;FS=4.505;HRun=4;HaplotypeScore=138.8110;InbreedingCoeff=0.9931;MQ=89.95;MQ0=0;MQRankSum=-9.278;QD=32.95;ReadPosRankSum=4.420;VQSLOD=3.0491;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,18:21:48.15:576,48,0	1/1:0,5:5:15.05:180,15,0	0/0:24,0:23:66.83:0,67,861	0/0:28,0:28:75.22:0,75,1025	1/1:2,28:30:84.26:1008,84,0	1/1:1,38:39:99:1296,108,0	1/1:0,16:16:45.14:540,45,0	1/1:4,36:40:99:1281,108,0	1/1:0,25:25:69.21:828,69,0	1/1:0,30:30:90.25:1065,90,0	1/1:1,22:23:63.19:756,63,0	1/1:1,21:22:63.19:756,63,0	1/1:2,27:29:72.22:863,72,0	1/1:2,35:37:99:1283,108,0	0/0:18,0:18:51.16:0,51,695	0/0:23,0:23:66.22:0,66,924	1/1:2,18:20:57.16:670,57,0	1/1:0,13:13:39.12:468,39,0	1/1:1,27:28:81.25:972,81,0	1/1:0,24:24:72.22:864,72,0	1/1:1,25:26:75.23:900,75,0	1/1:2,29:31:81.24:962,81,0	1/1:0,27:27:75.23:900,75,0	1/1:0,10:10:27.08:324,27,0	1/1:1,19:20:54.17:648,54,0	1/1:3,22:25:66.16:764,66,0	1/1:1,24:25:69.21:827,69,0	1/1:0,9:9:18.06:216,18,0
chr10	24087800	.	C	CA	20268.57	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-11.965;DP=618;FS=13.299;HRun=1;HaplotypeScore=55.8722;InbreedingCoeff=0.9954;MQ=71.59;MQ0=0;MQRankSum=-7.007;QD=39.36;ReadPosRankSum=2.903;VQSLOD=4.3190;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,22:23:63.21:944,63,0	1/1:0,18:18:51.17:756,51,0	0/0:22,0:22:63.19:0,63,773	0/0:22,0:22:60.16:0,60,734	1/1:1,19:20:48.03:775,48,0	1/1:2,20:22:54.18:808,54,0	1/1:2,19:21:48.16:716,48,0	1/1:1,31:32:90.26:1268,90,0	1/1:1,20:21:57.19:839,57,0	1/1:1,20:21:60.20:898,60,0	1/1:0,6:6:18.06:270,18,0	1/1:0,19:19:54.18:809,54,0	1/1:2,24:26:75.23:1101,75,0	1/1:3,24:27:66.22:987,66,0	0/0:42,0:42:99:0,126,1607	0/0:17,0:17:51.15:0,51,647	1/1:1,24:25:72.24:1079,72,0	1/1:0,26:26:69.23:1033,69,0	1/1:0,21:20:57.14:809,57,0	1/1:0,14:14:36.07:513,36,0	1/1:0,38:38:99:1516,102,0	1/1:1,15:16:42.14:629,42,0	1/1:2,14:16:36.12:528,36,0	1/1:0,20:20:57.19:854,57,0	1/1:2,26:28:66.22:989,66,0	1/1:3,23:26:71.89:1023,72,0	1/1:1,22:23:57.19:853,57,0	1/1:0,6:6:18.06:269,18,0
chr10	24089495	.	AT	A	6144.30	PASS	AB=0.568;AC=31;AF=0.554;AN=56;BaseQRankSum=-5.063;DP=436;FS=1.243;HRun=9;HaplotypeScore=68.4745;InbreedingCoeff=0.9085;MQ=73.65;MQ0=0;MQRankSum=1.419;QD=23.10;ReadPosRankSum=-0.702;VQSLOD=5.3768;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:35.58:0,36,239	1/1:2,9:11:27.01:247,27,0	0/0:9,0:9:15.02:0,15,161	0/0:7,0:7:11.97:0,12,117	1/1:1,18:18:51.02:466,51,0	1/1:2,20:22:57.03:522,57,0	1/1:2,6:8:18.01:165,18,0	1/1:5,32:37:93.03:851,93,0	1/1:1,12:13:36.02:329,36,0	0/0:23,0:23:60.49:0,60,319	0/0:15,0:15:44.36:0,44,286	1/1:2,16:18:48.02:439,48,0	1/1:1,19:20:57.03:522,57,0	1/1:2,16:18:42.02:384,42,0	0/0:12,0:12:33.10:0,33,381	0/0:16,0:16:45.13:0,45,519	0/0:8,0:8:14.85:0,15,104	0/0:12,0:12:26.93:0,27,219	0/0:20,0:20:46.81:0,47,280	0/0:24,0:24:67.99:0,68,435	0/0:8,0:8:23.63:0,24,150	1/1:1,11:12:33.01:302,33,0	1/1:0,8:8:12:110,12,0	1/1:0,1:1:3:27,3,0	1/1:0,11:11:30.02:275,30,0	0/1:5,16:21:4.21:380,0,4	1/1:3,27:30:78.04:714,78,0	1/1:1,16:17:45.02:412,45,0
chr10	24089989	.	GT	G	211.82	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.216;DP=294;FS=2.688;HRun=7;HaplotypeScore=27.9649;InbreedingCoeff=0.6785;MQ=68.68;MQ0=0;MQRankSum=0.410;QD=19.26;ReadPosRankSum=0.459;VQSLOD=2.4924;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,10:11:30.07:306,30,0	0/0:4,0:4:12.04:0,12,151	0/0:7,0:7:21.06:0,21,254	0/0:6,0:6:8.82:0,9,146	0/0:9,0:9:24.07:0,24,290	0/0:15,0:15:39.12:0,39,491	0/0:3,0:3:9.02:0,9,102	0/0:35,0:35:75.24:0,75,942	0/0:9,0:9:21.07:0,21,264	0/0:15,0:15:36.12:0,36,453	0/0:15,0:15:42.13:0,42,528	0/0:7,0:7:21.07:0,21,264	0/0:6,0:6:18.04:0,18,213	0/0:11,0:11:30.08:0,30,364	0/0:6,0:6:18.04:0,18,213	0/0:9,0:9:27.09:0,27,340	0/0:15,0:15:45.10:0,45,546	0/0:12,0:12:36.10:0,36,440	0/0:18,0:18:45.13:0,45,551	0/0:13,0:13:30.10:0,30,377	0/0:7,0:7:21.05:0,21,251	0/0:3,0:3:6.02:0,6,75	0/0:4,0:4:12.04:0,12,151	0/0:2,0:2:6.02:0,6,75	0/0:12,0:12:36.11:0,36,452	0/0:23,0:23:63.19:0,63,781	0/0:10,0:10:30.07:0,30,351	0/0:7,0:7:12.04:0,12,151
chr10	24090151	.	ACACAATAT	A	33.07	PASS	AB=0.891;AC=4;AF=0.074;AN=54;BaseQRankSum=-1.131;DP=252;FS=7.984;HRun=0;HaplotypeScore=78.0455;InbreedingCoeff=-0.0934;MQ=52.19;MQ0=7;MQRankSum=-1.398;QD=0.75;ReadPosRankSum=-0.930;VQSLOD=0.1921;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:3,10:12:11.73:14,0,12	0/0:2,0:2:6.02:0,6,131	./.	0/0:16,0:2:3.01:0,3,73	0/0:12,0:12:19.47:0,19,279	0/0:10,0:10:29.57:0,30,555	0/0:4,0:4:11.71:0,12,179	0/0:40,0:37:99:0,109,1719	0/0:7,0:7:20.41:0,20,301	0/0:6,0:6:14.48:0,14,132	0/0:15,0:15:29.59:0,30,291	0/0:3,0:3:8.76:0,9,135	0/0:5,0:5:12.04:0,12,299	0/0:4,0:4:9.03:0,9,199	0/0:3,0:3:9.03:0,9,336	0/0:2,0:2:6.02:0,6,181	0/0:8,0:8:14.86:0,15,182	0/0:22,0:22:26.89:0,27,321	0/1:16,0:15:12.46:12,0,194	0/0:13,0:13:35.91:0,36,373	0/0:11,0:11:11.90:0,12,130	0/0:1,0:1:3.01:0,3,47	0/0:2,0:2:5.69:0,6,87	0/0:3,0:3:2.68:0,3,11	0/0:6,0:6:15.05:0,15,279	0/1:7,0:7:76.59:77,0,194	0/0:6,0:6:16.53:0,17,191	0/1:8,0:8:34.01:34,0,216
chr10	24090153	.	ACAAT	A	1937.55	PASS	AB=0.910;AC=26;AF=0.481;AN=54;BaseQRankSum=-5.637;DP=254;FS=0.612;HRun=0;HaplotypeScore=56.9758;InbreedingCoeff=-0.1738;MQ=54.69;MQ0=7;MQRankSum=1.565;QD=9.41;ReadPosRankSum=-0.756;VQSLOD=2.2655;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:12:1.82:5,2,0	0/0:1,0:1:3:0,3,26	./.	0/0:19,0:4:3.48:0,3,47	0/1:12,0:12:73.85:103,0,74	0/1:11,0:11:25.63:26,0,187	0/1:4,0:4:22.05:22,0,75	0/1:42,0:39:99:111,0,741	0/1:6,0:6:53.26:84,0,53	0/1:1,5:6:5.20:174,0,5	1/1:1,14:15:15:270,15,0	0/1:3,0:3:16.96:36,0,17	0/0:5,0:5:1.47:0,1,63	0/0:4,0:4:9:0,9,82	0/0:3,0:3:9.03:0,9,218	0/0:1,0:1:3.01:0,3,86	1/1:6,1:7:7.58:126,8,0	0/1:9,12:21:72.88:120,0,73	1/1:6,10:15:13.19:443,13,0	1/1:1,12:13:15.01:270,15,0	0/1:2,8:10:27.31:173,0,27	0/1:1,0:1:0:0,0,0	0/1:2,0:2:28.05:28,0,41	1/1:3,0:3:3.01:34,3,0	0/1:5,0:5:19.04:19,0,118	0/1:8,0:8:11.60:12,0,68	0/1:8,0:8:35.25:35,0,50	0/0:8,0:8:3.44:0,3,121
chr10	24090155	.	A	AAT	2061.98	PASS	AB=0.833;AC=22;AF=0.423;AN=52;BaseQRankSum=-6.726;DP=248;FS=10.859;HRun=0;HaplotypeScore=55.2598;InbreedingCoeff=0.4952;MQ=57.23;MQ0=6;MQRankSum=1.216;QD=21.04;ReadPosRankSum=-3.347;VQSLOD=2.2124;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:2.84:0,3,14	1/1:1,0:1:2.90:16,3,0	./.	0/0:20,0:6:1.55:0,2,5	1/1:11,0:11:14.47:160,14,0	1/1:10,1:11:1.54:237,2,0	1/1:4,0:4:9.03:139,9,0	1/1:11,28:37:61.43:1280,61,0	1/1:5,0:5:8.76:77,9,0	0/0:5,0:5:8.26:0,8,43	0/0:15,0:15:11.29:0,11,56	1/1:3,0:3:2.90:16,3,0	1/1:5,0:5:8.71:47,9,0	1/1:4,0:4:8.92:110,9,0	0/0:3,0:3:9.03:0,9,110	0/0:1,0:1:3.01:0,3,37	0/0:6,0:7:8.64:0,9,55	0/0:20,0:20:2.80:0,3,42	0/0:15,0:14:13.15:0,13,69	0/0:13,0:13:11.36:0,11,56	0/0:10,0:10:7.24:0,7,32	1/1:1,0:1:2.90:16,3,0	0/0:2,0:2:3.01:0,3,37	./.	0/1:5,0:5:24.75:128,0,25	0/1:0,0:8:3.12:3,0,14	0/0:5,0:8:11.13:0,11,56	0/0:4,0:8:0.86:0,1,36
chr10	24092225	.	C	CT	15652.75	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-8.834;DP=446;FS=3.554;HRun=1;HaplotypeScore=39.2001;InbreedingCoeff=0.9365;MQ=70.68;MQ0=0;MQRankSum=-2.273;QD=39.53;ReadPosRankSum=3.691;VQSLOD=5.0023;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,12:12:33.11:494,33,0	1/1:0,10:10:30.10:450,30,0	0/0:6,0:6:17.54:0,18,194	0/0:7,0:7:11.55:0,12,189	1/1:0,24:24:66.09:935,66,0	1/1:0,11:11:33.11:494,33,0	1/1:0,9:9:24.08:360,24,0	1/1:2,32:34:93.28:1350,93,0	1/1:0,20:20:51.17:764,51,0	1/1:1,27:28:81.25:1175,81,0	1/1:1,34:35:96.24:1388,96,0	1/1:0,15:15:39.13:584,39,0	1/1:1,16:17:48.16:719,48,0	1/1:0,20:20:51.10:737,51,0	0/0:22,0:22:66.21:0,66,857	0/0:15,0:15:45.12:0,45,557	1/1:1,13:14:32.34:468,32,0	1/1:0,11:11:33.11:493,33,0	1/1:1,9:10:30.09:430,30,0	1/1:0,18:18:54.07:757,54,0	1/1:0,8:8:21.07:315,21,0	1/1:0,11:11:29.97:397,30,0	1/1:0,17:17:42.06:601,42,0	1/1:1,1:2:3.01:45,3,0	1/1:0,19:19:45.15:674,45,0	1/1:0,22:22:66.22:989,66,0	1/1:0,20:20:51.17:764,51,0	1/1:0,9:9:18.06:270,18,0
chr10	24092296	.	TTCTATCTATCTA	T	2930.89	PASS	AC=28;AF=0.538;AN=52;BaseQRankSum=-0.565;DP=431;FS=3.961;HRun=0;HaplotypeScore=164.5966;InbreedingCoeff=0.6798;MQ=63.25;MQ0=5;MQRankSum=-4.656;QD=14.65;ReadPosRankSum=0.671;VQSLOD=2.6406;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:19:10.15:0,10,360	1/1:2,3:5:9.03:303,9,0	./.	./.	1/1:20,4:24:10.59:186,11,0	1/1:10,2:12:12.04:309,12,0	1/1:12,0:12:3.01:37,3,0	0/0:33,0:33:0:0,0,0	1/1:16,3:19:15.04:299,15,0	1/1:19,2:21:9.03:267,9,0	1/1:15,4:18:12.04:307,12,0	0/0:11,0:17:30.10:0,30,740	1/1:15,2:17:12.02:254,12,0	1/1:11,1:12:3.01:57,3,0	0/0:14,0:17:5.85:0,6,215	0/0:15,0:15:24.08:0,24,1275	1/1:14,0:14:8.62:163,9,0	0/0:11,0:10:0.89:0,1,2	1/1:4,1:4:3.01:101,3,0	0/0:16,0:22:4.66:0,5,88	0/0:14,0:14:3.48:0,3,60	1/1:11,2:13:12.03:236,12,0	1/1:12,2:14:12.04:353,12,0	0/0:7,0:8:3.01:0,3,53	1/1:11,2:13:12.03:235,12,0	0/0:19,0:19:18.06:0,18,591	0/0:17,0:16:3.01:0,3,100	0/0:9,0:9:12.04:0,12,382
chr10	24092341	.	T	TCTATCTAG	1148.31	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-5.015;DP=429;FS=2.500;HRun=0;HaplotypeScore=132.2426;InbreedingCoeff=0.8434;MQ=53.14;MQ0=12;MQRankSum=3.066;QD=22.52;ReadPosRankSum=-0.188;VQSLOD=3.0142;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:25:43.18:0,43,428	0/0:6,0:6:17.81:0,18,168	0/0:14,0:4:11.40:0,11,69	0/0:15,0:1:2.84:0,3,14	0/0:19,0:19:35.69:0,36,296	0/0:12,0:12:32.87:0,33,304	0/0:11,0:11:23.91:0,24,192	0/0:22,0:16:38.93:0,39,338	0/0:17,0:17:44.72:0,45,352	0/0:12,0:11:32.01:0,32,296	0/0:13,0:12:26.80:0,27,239	0/0:22,0:22:60.04:0,60,739	0/0:17,0:17:38.84:0,39,311	0/0:13,0:13:29.82:0,30,233	0/0:13,0:13:17.80:0,18,217	0/0:17,0:17:45:0,45,679	0/0:13,0:13:26.53:0,27,180	0/0:20,0:19:44.65:0,45,324	0/0:8,0:6:11.40:0,11,89	0/0:24,0:24:62.75:0,63,620	0/0:14,0:14:23.97:0,24,200	0/0:10,0:10:26.30:0,26,188	0/0:10,0:10:23.78:0,24,219	0/0:10,0:10:23.69:0,24,173	0/0:20,0:20:56.82:0,57,514	1/1:2,21:24:59.69:806,60,0	1/1:0,17:19:3.01:88,3,0	1/1:8,0:8:21.01:386,21,0
chr10	24096370	.	G	GAA	11649.73	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=0.749;DP=493;FS=0.000;HRun=7;HaplotypeScore=81.9065;InbreedingCoeff=0.9403;MQ=78.01;MQ0=0;MQRankSum=-4.317;QD=26.72;ReadPosRankSum=1.704;VQSLOD=4.2831;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,12:15:36.07:541,36,0	1/1:2,14:16:48.08:727,48,0	0/0:21,0:20:48.07:0,48,518	0/0:4,0:4:3.01:0,3,35	1/1:6,23:29:78.17:1187,78,0	1/1:5,9:14:36.04:531,36,0	1/1:0,10:10:27.09:443,27,0	1/1:4,23:27:72.21:1112,72,0	1/1:0,15:15:45.15:738,45,0	1/1:1,0:19:42.42:149,42,0	1/1:2,0:23:50.38:187,50,0	1/1:0,0:14:34.93:123,35,0	1/1:3,20:22:66.23:1070,66,0	1/1:4,20:24:69.23:1104,69,0	0/0:16,0:16:48.12:0,48,547	0/0:16,0:16:42.12:0,42,489	1/1:4,0:24:49.91:176,50,0	1/1:2,0:13:21.13:88,21,0	1/1:7,0:23:42.55:169,43,0	1/1:2,0:23:52.87:196,53,0	1/1:1,0:11:19.96:70,20,0	1/1:2,4:6:15.05:246,15,0	1/1:4,15:19:48.15:765,48,0	1/1:3,5:9:21.06:300,21,0	1/1:6,23:29:81.19:1268,81,0	1/1:1,0:18:42.89:160,43,0	1/1:3,0:22:55.75:221,56,0	1/1:1,0:10:22.46:79,22,0
chr10	24096435	.	ATT	A	7973.67	PASS	AB=0.565;AC=27;AF=0.482;AN=56;BaseQRankSum=4.961;DP=579;FS=2.398;HRun=10;HaplotypeScore=97.4404;InbreedingCoeff=0.9482;MQ=69.11;MQ0=0;MQRankSum=-1.696;QD=25.56;ReadPosRankSum=1.313;VQSLOD=4.8874;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:64.46:0,64,998	1/1:1,12:13:39.06:421,39,0	0/0:10,0:11:23.28:0,23,273	0/0:9,0:9:12.04:0,12,177	1/1:2,27:29:81.19:891,81,0	1/1:2,16:18:45.12:502,45,0	1/1:0,19:19:54.15:602,54,0	1/1:9,35:44:99:1140,105,0	1/1:2,11:13:33:340,33,0	0/0:19,0:19:51.17:0,51,805	0/0:19,0:19:51.17:0,51,788	1/1:1,15:16:42.09:456,42,0	1/1:5,22:27:63.15:701,63,0	1/1:2,23:25:63.11:677,63,0	0/0:25,0:25:75.26:0,75,1190	0/0:12,0:12:33.11:0,33,523	0/0:25,0:25:54.18:0,54,850	0/0:14,0:15:30.57:0,31,476	0/0:18,0:19:53.64:0,54,754	0/0:32,0:32:75.24:0,75,1167	0/0:22,0:22:54.17:0,54,835	1/1:0,12:12:36.10:401,36,0	1/1:0,17:17:48.13:535,48,0	1/1:0,18:18:48.13:535,48,0	1/1:3,23:26:69.17:769,69,0	0/0:2,0:21:49.91:0,50,171	0/1:8,2:35:2.73:3,0,171	0/0:2,0:13:22.46:0,22,77
chr10	24097814	.	A	AG	437.79	PASS	AC=6;AF=0.111;AN=54;BaseQRankSum=-4.124;DP=329;FS=6.088;HRun=0;HaplotypeScore=60.5494;InbreedingCoeff=0.7504;MQ=58.60;MQ0=23;MQRankSum=-2.477;QD=11.23;ReadPosRankSum=-0.524;VQSLOD=3.0302;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:17:25.22:0,25,134	0/0:4,0:4:3.01:0,3,37	0/0:31,0:9:16.08:0,16,125	0/0:24,0:7:14.89:0,15,133	0/0:15,0:14:33.03:0,33,383	0/0:7,0:6:12.04:0,12,150	0/0:6,0:5:12.04:0,12,146	0/0:17,0:12:30.56:0,31,372	0/0:5,0:3:6.02:0,6,70	0/0:17,0:16:29.37:0,29,318	0/0:12,0:12:24.55:0,25,204	0/0:10,0:9:27.06:0,27,309	0/0:16,0:15:30.09:0,30,365	0/0:10,0:9:12.04:0,12,158	0/0:3,0:3:8.99:0,9,103	0/0:5,0:5:12.04:0,12,167	0/0:17,0:15:40.23:0,40,366	0/0:14,0:14:39.42:0,39,359	0/0:18,0:14:32.98:0,33,299	0/0:8,0:7:15.88:0,16,150	0/0:9,0:5:8.76:0,9,76	./.	0/0:1,0:1:2.97:0,3,20	0/0:4,0:4:9.03:0,9,107	0/0:17,0:17:39.99:0,40,452	1/1:3,10:10:12.71:162,13,0	1/1:4,9:12:22.98:220,23,0	1/1:2,11:12:17.94:192,18,0
chr10	24097815	.	AG	A	1467.83	PASS	AB=0.986;AC=30;AF=0.577;AN=52;BaseQRankSum=-6.365;DP=324;FS=15.453;HRun=8;HaplotypeScore=54.9378;InbreedingCoeff=0.3165;MQ=58.71;MQ0=22;MQRankSum=-2.020;QD=6.64;ReadPosRankSum=0.811;VQSLOD=0.0677;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:18,0:16:14.26:14,0,35	1/1:0,4:4:3:29,3,0	0/0:31,0:9:13.94:0,14,142	0/0:24,1:7:7.97:0,8,113	1/1:4,11:14:21.11:226,21,0	1/1:3,5:6:9.01:87,9,0	1/1:1,5:5:12.02:116,12,0	1/1:8,8:12:18.01:173,18,0	1/1:0,5:3:6.01:58,6,0	0/1:17,0:16:9.36:9,0,49	0/1:12,0:12:18.02:18,0,26	1/1:3,6:8:0.69:153,1,0	1/1:2,14:15:27.04:260,27,0	1/1:3,7:9:6:58,6,0	0/0:3,0:3:6.02:0,6,71	0/0:5,0:5:12.04:0,12,142	0/1:16,0:14:8.56:9,0,54	0/1:14,0:14:9.12:9,0,82	0/1:17,0:13:1.04:1,0,37	0/1:7,1:7:9.88:36,0,10	0/1:9,0:5:6.18:12,0,6	./.	./.	1/1:1,3:4:9.01:87,9,0	1/1:4,13:17:30.05:289,30,0	0/0:14,0:11:23.58:0,24,133	0/0:10,0:12:22.98:0,23,127	0/0:11,0:11:17.02:0,17,86
chr10	24097923	.	A	AAG	573.89	PASS	AB=0.882;AC=14;AF=0.250;AN=56;BaseQRankSum=2.121;DP=361;FS=49.023;HRun=0;HaplotypeScore=61.4506;InbreedingCoeff=-0.0395;MQ=48.16;MQ0=33;MQRankSum=4.608;QD=3.38;ReadPosRankSum=1.212;VQSLOD=0.1192;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:14:38.63:0,39,275	1/1:7,1:8:5.41:96,5,0	0/1:28,0:3:0.75:1,0,19	0/0:19,0:7:9.42:0,9,69	0/1:15,10:28:99:125,0,115	0/1:5,4:11:31.16:98,0,31	0/0:9,0:13:2.43:0,2,75	0/1:21,1:20:46.72:148,0,47	0/1:5,0:3:20.38:20,0,27	0/0:20,0:19:6.37:0,6,170	0/1:13,0:12:1.08:1,0,96	1/1:5,0:5:11.70:101,12,0	0/1:12,0:11:17.54:18,0,23	0/0:6,0:5:4.89:0,5,48	0/0:6,0:6:14.89:0,15,112	0/0:9,0:9:20.88:0,21,165	0/0:19,0:16:4.41:0,4,77	0/0:13,0:8:6.05:0,6,61	0/1:16,0:16:11.99:12,0,85	0/0:19,0:16:12.57:0,13,76	0/0:2,0:2:3.06:0,3,8	0/0:1,0:1:2.04:0,2,6	0/1:5,4:8:26.80:27,0,37	0/0:8,0:4:4.54:0,5,16	0/1:10,0:11:23.78:72,0,24	0/0:9,0:8:22.56:0,23,146	0/0:23,0:21:59.27:0,59,418	0/0:4,0:3:8.93:0,9,64
chr10	24097924	.	A	AG	289.59	PASS	AB=0.971;AC=12;AF=0.214;AN=56;BaseQRankSum=0.825;DP=362;FS=66.370;HRun=0;HaplotypeScore=58.4674;InbreedingCoeff=-0.0274;MQ=48.46;MQ0=32;MQRankSum=4.191;QD=2.03;ReadPosRankSum=3.466;VQSLOD=-0.4297;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:14:38.42:0,38,259	0/0:8,0:8:9.21:0,9,51	0/1:28,0:3:0.79:1,0,15	0/0:19,0:7:9.35:0,9,65	0/0:26,0:26:40.39:0,40,276	0/1:12,0:11:25.93:26,0,39	0/0:15,0:14:22.24:0,22,105	0/0:22,0:20:35.31:0,35,200	0/0:5,0:3:7.11:0,7,38	0/1:19,1:19:64.57:65,0,134	0/1:11,1:12:28.93:29,0,56	0/0:5,0:5:3.62:0,4,28	0/0:13,0:12:7.90:0,8,41	0/0:6,0:5:13.76:0,14,69	0/0:6,0:6:17.86:0,18,135	0/0:9,0:9:23.86:0,24,188	0/1:19,1:17:23.59:24,0,45	0/1:14,0:9:12.30:12,0,53	0/1:15,1:16:22.50:147,0,23	0/1:18,0:15:25.04:86,0,25	1/1:2,0:2:0.69:4,1,0	1/1:0,1:1:3.01:33,3,0	0/0:10,0:9:6.18:0,6,57	0/0:9,0:4:4.34:0,4,13	0/0:12,0:11:10.39:0,10,97	0/0:9,0:8:22.88:0,23,153	0/0:22,0:21:58.16:0,58,368	0/0:4,0:3:8.73:0,9,49
chr10	24097926	.	G	GAA	2504.66	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-2.427;DP=364;FS=8.023;HRun=19;HaplotypeScore=55.5918;InbreedingCoeff=0.7831;MQ=52.44;MQ0=27;MQRankSum=-1.198;QD=10.14;ReadPosRankSum=-0.468;VQSLOD=0.7745;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:14:23.64:0,24,219	1/1:8,0:8:17.52:97,18,0	0/0:29,0:4:5.88:0,6,49	0/0:20,0:8:14.31:0,14,114	1/1:26,0:26:32.88:164,33,0	1/1:12,0:11:17.95:127,18,0	1/1:15,0:14:9.19:73,9,0	1/1:23,0:21:35.31:206,35,0	1/1:5,0:3:3.47:27,3,0	1/1:11,9:19:24.83:282,25,0	1/1:6,5:11:14.91:186,15,0	1/1:4,0:5:14.17:88,14,0	1/1:3,0:12:3.48:30,3,0	1/1:6,0:5:5.55:25,6,0	0/0:8,0:8:11.55:0,12,119	0/0:8,0:8:14.76:0,15,142	1/1:9,12:18:10.63:138,11,0	1/1:5,8:10:8.67:113,9,0	1/1:6,11:18:42.80:570,43,0	1/1:7,10:15:24.07:312,24,0	1/1:1,1:2:5.23:53,5,0	1/1:1,0:1:0.47:1,0,0	1/1:11,0:10:9.28:63,9,0	1/1:8,0:4:5.12:23,5,0	1/1:12,0:11:20.11:118,20,0	0/0:8,0:7:12.02:0,12,126	0/0:23,0:21:41.50:0,42,349	0/0:4,0:3:9.02:0,9,94
chr10	24099195	.	GT	G	1457.70	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=7.389;DP=430;FS=1.934;HRun=5;HaplotypeScore=40.4583;InbreedingCoeff=0.9708;MQ=73.15;MQ0=0;MQRankSum=0.801;QD=26.99;ReadPosRankSum=2.087;VQSLOD=3.2221;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:45.14:0,45,599	0/0:7,0:7:21.06:0,21,271	0/0:5,0:5:15.05:0,15,201	0/0:12,0:11:27.09:0,27,392	0/0:23,0:23:66.22:0,66,898	0/0:24,0:24:63.21:0,63,862	0/0:6,0:6:15.03:0,15,188	0/0:34,0:34:93.28:0,93,1230	0/0:17,0:17:48.16:0,48,656	0/0:18,0:18:48.16:0,48,653	0/0:26,0:26:72.24:0,72,980	0/0:19,0:19:54.18:0,54,739	0/0:12,0:12:36.11:0,36,476	0/0:18,0:18:54.18:0,54,738	0/0:17,0:17:48.15:0,48,641	0/0:15,0:15:42.14:0,42,575	0/0:19,0:19:54.18:0,54,738	0/0:8,0:8:21.07:0,21,287	0/0:12,0:12:36.12:0,36,493	0/0:18,0:18:45.14:0,45,599	0/0:8,0:8:24.08:0,24,328	0/0:4,0:4:12.04:0,12,164	0/0:11,0:11:33.11:0,33,451	0/0:9,0:8:27.05:0,27,348	0/0:18,0:18:42.12:0,42,556	1/1:2,26:28:78.22:885,78,0	1/1:0,16:16:45.13:510,45,0	1/1:4,6:10:18.05:204,18,0
chr10	24099557	.	AAGAAAGAAACAAACAAAGAAAGAAAGAG	A	8925.03	PASS	AB=0.992;AC=43;AF=0.768;AN=56;BaseQRankSum=-0.015;DP=378;FS=3.567;HRun=0;HaplotypeScore=226.4437;InbreedingCoeff=0.2655;MQ=61.33;MQ0=10;MQRankSum=-1.378;QD=27.13;ReadPosRankSum=0.022;VQSLOD=3.1495;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:19:57.61:58,0,1242	1/1:10,0:10:15.05:437,15,0	0/0:24,0:9:20.95:0,21,234	0/1:17,0:11:20.12:20,0,136	1/1:1,20:21:14.87:145,15,0	1/1:14,0:14:30.07:784,30,0	1/1:11,0:11:26.92:667,27,0	1/1:3,18:21:50.99:711,51,0	1/1:6,0:6:9.03:182,9,0	1/1:0,16:16:38.64:812,39,0	1/1:0,22:22:23.74:233,24,0	1/1:7,0:7:21:415,21,0	1/1:8,0:8:21.03:484,21,0	1/1:10,0:10:21.04:412,21,0	0/0:10,0:10:30.09:0,30,1799	0/0:14,0:14:39.12:0,39,2045	0/1:6,0:6:31.24:239,0,31	0/1:7,0:7:8.92:235,0,9	1/1:13,0:12:30.04:655,30,0	1/1:0,22:22:11.86:112,12,0	1/1:4,0:4:5.95:105,6,0	1/1:0,14:14:5.97:70,6,0	1/1:8,0:8:24.06:505,24,0	0/1:6,0:6:7.90:13,0,8	1/1:15,0:15:24.05:663,24,0	0/1:23,0:22:99:558,0,626	1/1:14,0:13:6:281,6,0	0/1:10,0:8:99:131,0,497
chr10	24099559	.	GAA	G	833.22	PASS	AB=0.967;AC=21;AF=0.375;AN=56;BaseQRankSum=4.598;DP=367;FS=3.257;HRun=3;HaplotypeScore=112.7631;InbreedingCoeff=-0.2250;MQ=58.45;MQ0=10;MQRankSum=-7.087;QD=4.17;ReadPosRankSum=5.380;VQSLOD=-0.1261;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:20:38.92:0,39,569	0/1:10,0:10:15.02:23,0,15	0/0:24,0:8:18.45:0,18,224	0/0:17,0:10:1.68:0,2,139	0/0:20,0:20:11.91:0,12,96	1/1:13,0:13:20.31:75,20,0	0/1:10,0:10:18.17:18,0,47	0/1:18,0:18:47.24:47,0,125	0/1:6,0:6:0.54:1,0,40	0/1:16,0:16:10.85:11,0,95	0/0:22,0:22:14.92:0,15,123	0/1:7,0:7:7.33:58,0,7	0/1:7,0:7:22.87:39,0,23	0/1:9,0:9:41.71:57,0,42	0/0:10,0:10:30.05:0,30,485	0/0:14,0:14:39.01:0,39,628	0/1:6,0:6:10.64:11,0,85	0/1:7,0:7:10.69:11,0,50	0/1:12,0:11:46.07:49,0,46	0/0:22,0:22:8.94:0,9,66	0/1:3,0:3:3.20:3,0,14	0/0:14,0:14:3:0,3,25	0/1:8,0:8:5.55:6,0,86	0/1:6,0:6:6.10:6,0,13	0/1:14,0:14:5.97:35,0,6	0/1:12,11:22:66.64:297,0,67	1/1:8,7:13:29.08:213,29,0	0/1:7,3:8:34.31:34,0,67
chr10	24099563	.	GAAAC	G	4111.11	PASS	AB=0.750;AC=45;AF=0.804;AN=56;BaseQRankSum=5.966;DP=351;FS=0.698;HRun=0;HaplotypeScore=107.4533;InbreedingCoeff=0.5886;MQ=55.13;MQ0=11;MQRankSum=-3.844;QD=15.46;ReadPosRankSum=1.203;VQSLOD=3.4845;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:20:15.21:0,15,367	1/1:1,9:10:12.04:207,12,0	0/0:20,0:5:5.62:0,6,39	0/0:16,0:8:2.45:0,2,52	1/1:20,0:20:2.94:18,3,0	1/1:1,11:12:24.08:412,24,0	1/1:4,5:8:21.04:305,21,0	1/1:18,0:18:17.82:149,18,0	1/1:2,4:6:3.01:52,3,0	1/1:16,0:16:23.96:311,24,0	1/1:22,0:22:8.59:46,9,0	1/1:1,3:4:9.03:155,9,0	1/1:2,4:6:15.04:231,15,0	1/1:2,5:7:9.03:153,9,0	0/0:12,0:12:33.04:0,33,554	0/0:13,0:13:33.08:0,33,726	0/1:4,2:6:6.68:104,0,7	1/1:3,5:8:8.08:125,8,0	1/1:5,6:10:18.06:305,18,0	1/1:22,0:22:2.94:18,3,0	1/1:2,1:3:3.01:51,3,0	1/1:14,0:14:2.92:17,3,0	1/1:3,4:7:17.80:202,18,0	1/1:2,4:6:2.98:22,3,0	1/1:1,12:13:18.06:308,18,0	1/1:10,2:21:49.23:507,49,0	1/1:6,0:12:29.99:295,30,0	1/1:6,0:7:17.34:117,17,0
chr10	24099579	.	GAA	G	1044.58	PASS	AB=1.000;AC=12;AF=0.214;AN=56;BaseQRankSum=-1.200;DP=363;FS=5.321;HRun=3;HaplotypeScore=119.0922;InbreedingCoeff=0.3014;MQ=48.04;MQ0=10;MQRankSum=-2.702;QD=8.49;ReadPosRankSum=0.743;VQSLOD=0.3426;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:22:26.44:26,0,66	0/0:10,0:10:11.68:0,12,92	0/0:18,0:3:5.74:0,6,37	0/1:13,0:4:11.86:12,0,15	0/0:20,0:20:2.97:0,3,20	0/0:17,0:17:5.61:0,6,212	0/0:11,0:9:10.90:0,11,73	0/1:18,0:18:13.51:14,0,83	0/0:4,0:4:4.56:0,5,42	0/0:16,0:16:5.98:0,6,116	0/0:22,0:22:3.01:0,3,38	0/0:6,0:6:13.69:0,14,126	0/1:4,0:4:4.96:5,0,5	0/1:6,0:6:1.30:1,0,72	0/0:14,0:14:39.12:0,39,689	0/0:12,0:12:36.12:0,36,673	0/0:8,0:8:12.53:0,13,152	0/0:10,0:10:12.12:0,12,126	0/1:11,0:11:8.19:8,0,128	0/0:22,0:22:0:0,0,0	0/0:4,0:4:7.84:0,8,96	0/0:14,0:14:0:0,0,0	0/0:10,0:10:17.23:0,17,162	0/0:5,0:5:5.98:0,6,64	0/0:17,0:17:28.92:0,29,237	1/1:10,11:19:47.46:642,47,0	1/1:11,6:15:23.81:302,24,0	1/1:4,4:6:14.41:185,14,0
chr10	24099581	.	A	AAG	732.62	PASS	AB=0.958;AC=8;AF=0.148;AN=54;BaseQRankSum=0.560;DP=361;FS=3.639;HRun=0;HaplotypeScore=126.0369;InbreedingCoeff=0.6490;MQ=47.74;MQ0=10;MQRankSum=-3.884;QD=8.62;ReadPosRankSum=1.564;VQSLOD=3.5927;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:20,2:19:2.13:42,0,2	0/0:8,0:8:16.52:0,17,136	./.	0/1:13,0:4:0.11:0,0,0	0/0:20,0:20:2.97:0,3,20	0/0:16,0:16:37.06:0,37,321	0/0:11,0:9:16.74:0,17,127	0/0:18,0:18:8.98:0,9,82	0/0:4,0:4:5.99:0,6,58	0/0:16,0:16:10.63:0,11,171	0/0:22,0:22:3.01:0,3,37	0/0:6,0:6:17.98:0,18,177	0/0:4,0:4:10.77:0,11,72	0/0:6,0:6:14.01:0,14,124	0/0:13,0:13:36.11:0,36,446	0/0:12,0:12:36.12:0,36,458	0/0:8,0:8:13.37:0,13,137	0/0:11,0:11:14.92:0,15,156	0/0:12,0:12:28.04:0,28,203	0/0:22,0:22:0:0,0,0	0/0:4,0:4:8.93:0,9,69	0/0:14,0:14:0:0,0,0	0/0:10,0:10:20.98:0,21,212	0/0:7,0:7:8.89:0,9,86	0/0:15,0:15:35.92:0,36,327	1/1:15,6:19:17.29:473,17,0	1/1:10,9:17:20.96:188,21,0	1/1:10,0:8:13.81:167,14,0
chr10	24099591	.	GAA	G	493.19	PASS	AB=1.000;AC=6;AF=0.111;AN=54;BaseQRankSum=2.190;DP=368;FS=1.583;HRun=3;HaplotypeScore=128.3216;InbreedingCoeff=0.2005;MQ=47.90;MQ0=8;MQRankSum=-1.578;QD=6.09;ReadPosRankSum=3.173;VQSLOD=0.3885;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,17:18:2.93:339,3,0	0/0:7,0:7:16.18:0,16,109	./.	0/1:10,0:3:0.11:0,0,0	0/0:21,0:21:2.98:0,3,21	0/0:16,0:16:41.61:0,42,292	0/0:11,0:9:16.75:0,17,145	0/0:17,0:16:20.88:0,21,193	0/0:4,0:4:8.94:0,9,68	0/0:18,0:18:11.85:0,12,151	0/0:23,0:23:11.61:0,12,74	0/0:7,0:7:17.95:0,18,148	0/0:6,0:6:15.55:0,16,97	0/0:8,0:8:22.09:0,22,144	0/0:14,0:14:42.13:0,42,728	0/0:14,0:14:42.13:0,42,690	0/0:9,0:9:18.98:0,19,152	0/0:11,0:11:17.96:0,18,178	0/0:15,0:15:28.34:0,28,211	0/0:26,0:26:13.21:0,13,74	0/0:5,0:5:11.58:0,12,95	0/0:15,0:15:8.24:0,8,44	0/0:10,0:10:26.73:0,27,209	0/0:6,0:6:14.86:0,15,124	0/0:13,0:13:37.34:0,37,282	0/1:23,0:21:60.64:142,0,61	0/1:21,0:19:84.28:84,0,118	0/1:6,0:6:28.04:38,0,28
chr10	24099740	.	AG	A	10719.12	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=9.271;DP=418;FS=11.202;HRun=1;HaplotypeScore=76.6752;InbreedingCoeff=0.9765;MQ=62.95;MQ0=2;MQRankSum=-0.704;QD=37.61;ReadPosRankSum=0.839;VQSLOD=4.6331;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:32.59:0,33,791	1/1:0,8:8:24.08:329,24,0	0/0:24,0:13:29.99:0,30,387	0/0:17,0:12:19.22:0,19,319	1/1:0,19:19:54.14:729,54,0	1/1:0,19:20:46.55:703,47,0	1/1:1,15:15:39.13:544,39,0	1/1:3,21:21:63.15:804,63,0	1/1:0,13:13:36.12:492,36,0	1/1:0,23:23:69.21:945,69,0	1/1:0,20:20:57.19:799,57,0	1/1:0,13:13:39.13:541,39,0	1/1:0,10:10:30.10:414,30,0	1/1:0,12:12:35.98:469,36,0	0/0:14,0:14:42.14:0,42,657	0/0:13,0:13:39.13:0,39,610	1/1:0,19:19:54.18:754,54,0	1/1:3,6:9:5.95:256,6,0	1/1:0,14:14:42.11:565,42,0	1/1:0,13:13:39.13:545,39,0	1/1:0,14:14:39.13:545,39,0	1/1:0,7:7:18.06:249,18,0	1/1:0,8:8:21.41:263,21,0	1/1:0,11:11:30.10:419,30,0	1/1:0,12:12:27:353,27,0	0/0:20,1:21:18.25:0,18,848	0/0:15,0:15:39.13:0,39,600	0/0:7,0:7:21.07:0,21,327
chr10	24099762	.	GGAAGGAAAGAAA	G	4323.26	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=5.273;DP=382;FS=12.762;HRun=0;HaplotypeScore=169.0360;InbreedingCoeff=0.9592;MQ=49.34;MQ0=3;MQRankSum=-2.248;QD=27.71;ReadPosRankSum=0.135;VQSLOD=3.6781;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:43.35:0,43,859	1/1:4,3:7:21.01:435,21,0	0/0:13,0:4:11.93:0,12,91	0/0:7,0:3:3.01:0,3,33	1/1:14,2:16:43.96:464,44,0	1/1:14,0:14:38.82:329,39,0	1/1:10,0:9:20.93:196,21,0	1/1:23,0:18:32.50:243,32,0	1/1:9,0:12:8.72:141,9,0	0/0:21,0:21:57.10:0,57,1043	0/0:15,0:15:37.14:0,37,506	1/1:12,0:12:32.87:385,33,0	1/1:10,1:11:30:455,30,0	1/1:12,1:13:32.82:372,33,0	0/0:13,0:13:36.04:0,36,737	0/0:15,0:15:42.07:0,42,958	0/0:22,0:22:56.97:0,57,1075	0/0:13,0:13:27.02:0,27,596	0/0:15,0:14:32.94:0,33,626	0/0:12,0:11:30.01:0,30,435	0/0:13,0:13:39.05:0,39,1252	1/1:7,0:7:21.02:259,21,0	1/1:6,3:9:26.96:381,27,0	1/1:12,0:12:20.97:242,21,0	1/1:9,1:10:30.04:421,30,0	0/0:16,0:16:41.98:0,42,772	0/0:23,0:23:34.84:0,35,537	0/0:6,0:6:18.04:0,18,742
chr10	24099766	.	G	GGAAA	437.82	PASS	AC=8;AF=0.160;AN=50;BaseQRankSum=-3.207;DP=371;FS=4.235;HRun=0;HaplotypeScore=123.0096;InbreedingCoeff=0.6228;MQ=49.27;MQ0=3;MQRankSum=0.633;QD=6.00;ReadPosRankSum=-1.323;VQSLOD=2.4332;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:21:12.47:0,12,108	0/0:5,0:5:11.33:0,11,57	./.	./.	0/0:17,0:17:8.56:0,9,46	0/0:16,0:16:2.94:0,3,18	0/0:9,0:8:2.97:0,3,20	./.	0/0:12,0:12:16.07:0,16,115	0/0:15,0:21:29.80:0,30,259	0/0:10,0:12:10.55:0,11,82	0/0:11,0:11:5.88:0,6,36	0/0:10,0:10:11.85:0,12,84	0/0:12,0:12:14.40:0,14,84	0/0:12,0:12:15:0,15,165	0/0:14,0:14:18.01:0,18,190	1/1:19,0:19:15.58:148,16,0	1/1:14,0:14:14.22:135,14,0	0/0:16,0:15:12.02:0,12,127	0/0:12,0:11:3:0,3,25	0/0:14,0:14:21.04:0,21,278	0/0:7,0:7:3:0,3,25	0/0:10,0:10:14.12:0,14,80	0/0:13,0:13:0.96:0,1,42	0/0:10,0:10:8.56:0,9,47	1/1:16,0:16:12.02:153,12,0	1/1:9,13:24:6.02:140,6,0	0/0:6,0:7:9.02:0,9,120
chr10	24100911	.	TGAAA	T	19131.17	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=15.402;DP=562;FS=13.295;HRun=0;HaplotypeScore=148.5575;InbreedingCoeff=0.9752;MQ=77.04;MQ0=0;MQRankSum=-15.973;QD=47.12;ReadPosRankSum=1.863;VQSLOD=5.3295;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:57.20:0,57,1538	1/1:0,6:6:18.06:341,18,0	0/0:25,0:25:69.22:0,69,1772	0/0:14,0:14:39.11:0,39,941	1/1:0,40:40:99:1970,105,0	1/1:3,30:33:87.30:1650,87,0	1/1:2,14:16:42.14:793,42,0	1/1:8,22:30:66.21:1213,66,0	1/1:0,14:14:33.11:626,33,0	1/1:1,30:31:83.86:1552,84,0	1/1:2,24:26:63.22:1192,63,0	1/1:3,18:21:57.19:1078,57,0	1/1:0,16:16:45.15:853,45,0	1/1:1,16:17:42.14:796,42,0	0/0:15,0:15:45.15:0,45,1213	0/0:14,0:14:39.13:0,39,1053	1/1:0,11:11:26.65:511,27,0	1/1:3,3:6:9.03:171,9,0	1/1:0,21:21:63.22:1189,63,0	1/1:2,28:30:75.26:1404,75,0	1/1:3,8:11:15.05:264,15,0	1/1:2,24:26:69.24:1307,69,0	1/1:1,16:17:42.14:796,42,0	1/1:2,6:8:9.03:171,9,0	1/1:1,25:26:66.23:1252,66,0	0/0:30,1:31:30.38:0,30,2156	0/0:30,0:30:90.31:0,90,2361	0/0:7,0:7:18.53:0,19,486
chr10	24101279	.	TA	T	16529.49	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=16.654;DP=632;FS=1.426;HRun=1;HaplotypeScore=137.0097;InbreedingCoeff=0.9997;MQ=74.86;MQ0=0;MQRankSum=-2.690;QD=37.14;ReadPosRankSum=0.334;VQSLOD=4.4535;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:81.16:0,81,1090	1/1:0,15:15:39.13:541,39,0	0/0:13,0:12:30.08:0,30,378	0/0:19,0:19:46.86:0,47,513	1/1:0,43:43:99:1638,123,0	1/1:1,23:24:69.10:933,69,0	1/1:0,18:18:45.15:617,45,0	1/1:0,31:31:90.24:1165,90,0	1/1:0,11:11:33.11:447,33,0	1/1:1,27:28:84.16:1125,84,0	1/1:0,19:19:57.15:769,57,0	1/1:1,24:25:60.20:828,60,0	1/1:0,24:24:66.22:920,66,0	1/1:0,17:17:42.14:585,42,0	0/0:28,0:28:84.26:0,84,1166	0/0:23,0:23:69.23:0,69,979	1/1:0,18:18:48.16:668,48,0	1/1:1,10:11:30.07:389,30,0	1/1:0,21:21:63.13:794,63,0	1/1:0,24:24:63.06:787,63,0	1/1:0,15:15:36.12:501,36,0	1/1:0,30:30:87.19:1163,87,0	1/1:0,23:23:54.05:747,54,0	1/1:0,26:26:72.24:995,72,0	1/1:0,22:22:66.22:917,66,0	0/0:32,0:32:95.97:0,96,1282	0/0:31,0:31:93.28:0,93,1281	0/0:13,0:13:39.11:0,39,538
chr10	24101722	.	A	AAC	8751.80	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=13.569;DP=506;FS=3.225;HRun=0;HaplotypeScore=117.4686;InbreedingCoeff=0.9736;MQ=80.76;MQ0=1;MQRankSum=-2.900;QD=25.59;ReadPosRankSum=0.475;VQSLOD=5.9861;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:69.17:0,69,948	1/1:9,0:9:19.18:177,19,0	0/0:21,0:19:41.96:0,42,537	0/0:17,0:17:33.59:0,34,511	1/1:30,0:31:80.03:897,80,0	1/1:21,1:22:63.05:655,63,0	1/1:9,0:9:20.68:216,21,0	1/1:21,1:23:51.60:307,52,0	1/1:24,0:23:60.16:603,60,0	1/1:17,0:17:49.11:490,49,0	1/1:27,0:27:66.14:720,66,0	1/1:16,3:19:54.50:571,54,0	1/1:16,0:16:42.47:432,42,0	1/1:12,0:12:33.08:365,33,0	0/0:16,0:16:27.16:0,27,628	0/0:21,0:21:63.19:0,63,889	1/1:15,0:15:30.52:338,31,0	1/1:5,0:5:11.40:120,11,0	1/1:10,0:10:28.92:276,29,0	1/1:21,1:22:58.56:602,59,0	1/1:11,0:11:28.88:234,29,0	1/1:13,0:13:29.25:289,29,0	1/1:26,0:26:57.66:570,58,0	1/1:8,0:8:22.61:241,23,0	1/1:22,0:21:62.33:647,62,0	0/0:29,0:29:84.27:0,84,1210	0/0:33,0:33:90.30:0,90,1315	0/0:2,0:2:6.02:0,6,88
chr10	24101724	.	C	CA	13239.85	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=7.845;DP=505;FS=3.766;HRun=2;HaplotypeScore=92.3804;InbreedingCoeff=0.9743;MQ=80.12;MQ0=1;MQRankSum=-6.614;QD=38.71;ReadPosRankSum=0.604;VQSLOD=5.1313;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:57.48:0,57,568	1/1:3,6:9:27.07:375,27,0	0/0:20,0:18:24.97:0,25,454	0/0:16,0:17:17.32:0,17,510	1/1:5,27:32:81.24:1112,81,0	1/1:4,18:22:65.43:910,65,0	1/1:3,7:10:27.08:370,27,0	1/1:2,20:22:63.21:952,63,0	1/1:4,17:21:63.19:888,63,0	1/1:1,16:17:51.17:757,51,0	1/1:3,24:27:66.22:948,66,0	1/1:4,15:19:57.18:774,57,0	1/1:2,13:15:45.15:641,45,0	1/1:0,11:11:33.07:443,33,0	0/0:15,0:15:45.14:0,45,613	0/0:22,0:22:66.17:0,66,883	1/1:2,12:15:32.16:516,32,0	1/1:1,4:5:12.01:170,12,0	1/1:4,9:12:32.65:458,33,0	1/1:5,16:22:60.17:817,60,0	1/1:3,7:10:29.97:426,30,0	1/1:2,11:13:35.46:489,35,0	1/1:9,18:27:66.08:931,66,0	1/1:2,7:9:23.99:347,24,0	1/1:2,19:21:63.21:915,63,0	0/0:30,0:30:84.15:0,84,845	0/0:33,0:33:93.57:0,94,886	0/0:2,0:2:6.01:0,6,62
chr10	24101725	.	T	TC	8073.93	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=13.053;DP=517;FS=5.325;HRun=8;HaplotypeScore=118.4422;InbreedingCoeff=0.9734;MQ=79.17;MQ0=1;MQRankSum=-4.574;QD=22.81;ReadPosRankSum=1.101;VQSLOD=4.1296;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:60.02:0,60,549	1/1:4,5:9:15.03:149,15,0	0/0:20,0:18:25.57:0,26,211	0/0:17,0:17:15.41:0,15,341	1/1:7,28:35:83.97:810,84,0	1/1:6,17:23:56.61:537,57,0	1/1:4,6:10:20.98:202,21,0	1/1:22,3:25:35.23:249,35,0	1/1:5,17:21:54.07:537,54,0	1/1:3,15:18:48.10:493,48,0	1/1:3,24:27:66.13:671,66,0	1/1:6,14:20:56.89:518,57,0	1/1:2,13:15:39.04:379,39,0	1/1:1,11:12:35.65:337,36,0	0/0:15,0:15:45.02:0,45,412	0/0:21,0:21:63.03:0,63,576	1/1:4,11:15:32.75:325,33,0	1/1:3,3:6:17.01:136,17,0	1/1:6,7:12:32.82:287,33,0	1/1:5,17:22:55.75:539,56,0	1/1:3,7:10:24.39:215,24,0	1/1:3,9:12:24.51:243,25,0	1/1:10,18:28:58.86:573,59,0	1/1:2,7:9:24.03:235,24,0	1/1:5,18:22:63.95:640,64,0	0/0:29,0:29:84.03:0,84,763	0/0:33,0:33:93.04:0,93,851	0/0:2,0:2:6:0,6,55
chr10	24101797	.	G	GA	13166.82	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=5.393;DP=521;FS=0.000;HRun=7;HaplotypeScore=83.9408;InbreedingCoeff=0.9922;MQ=82.02;MQ0=0;MQRankSum=-5.022;QD=30.55;ReadPosRankSum=0.832;VQSLOD=4.7070;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:78.12:0,78,753	1/1:1,14:15:42.13:507,42,0	0/0:13,0:13:27.04:0,27,258	0/0:16,0:16:27.08:0,27,378	1/1:5,39:44:90.75:1285,91,0	1/1:2,17:19:48.15:580,48,0	1/1:2,10:12:30.05:346,30,0	1/1:9,31:40:99:1140,99,0	1/1:1,16:17:22.18:551,22,0	1/1:3,10:13:30.09:362,30,0	1/1:5,10:15:35.94:410,36,0	1/1:4,12:16:39.12:468,39,0	1/1:0,27:27:78.21:927,78,0	1/1:1,19:20:57.17:689,57,0	0/0:9,0:9:18.01:0,18,168	0/0:22,1:23:26.86:0,27,543	1/1:3,9:12:27.08:326,27,0	1/1:1,11:12:21.06:254,21,0	1/1:0,13:13:36.11:435,36,0	1/1:0,24:24:72.15:838,72,0	1/1:0,7:7:18.06:217,18,0	1/1:1,22:23:54.59:637,55,0	1/1:2,18:20:51.16:616,51,0	1/1:0,14:14:42.13:507,42,0	1/1:1,11:12:30.09:362,30,0	1/1:3,21:24:37.22:732,37,0	1/1:1,23:24:60.18:725,60,0	1/1:0,8:8:21.06:254,21,0
chr10	24102724	.	TAATAACAACAAC	T	4455.84	PASS	AB=0.935;AC=34;AF=0.630;AN=54;BaseQRankSum=1.779;DP=205;FS=17.136;HRun=0;HaplotypeScore=76.6584;InbreedingCoeff=0.2493;MQ=57.73;MQ0=2;MQRankSum=0.123;QD=26.21;ReadPosRankSum=0.123;VQSLOD=1.9029;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:7:21.06:0,21,497	1/1:0,4:4:3.01:69,3,0	0/0:9,0:9:12.08:0,12,615	0/0:1,0:1:3.01:0,3,47	1/1:0,8:8:21:460,21,0	1/1:1,12:13:9.03:296,9,0	0/0:1,0:1:3.01:0,3,44	1/1:2,23:23:66.09:1131,66,0	1/1:0,6:6:6.02:227,6,0	1/1:1,3:4:12.02:212,12,0	0/1:12,0:12:99:237,0,130	1/1:0,4:4:6.02:227,6,0	1/1:0,7:7:6.02:227,6,0	1/1:0,2:2:3.01:114,3,0	0/0:4,0:4:12.04:0,12,605	0/0:2,0:2:6.02:0,6,261	0/1:14,0:14:19.86:92,0,20	0/1:8,0:8:25.72:26,0,48	1/1:11,0:11:12.95:422,13,0	0/1:4,7:11:46.19:196,0,46	1/1:2,0:2:3.01:32,3,0	1/1:0,2:2:3.01:114,3,0	1/1:0,3:3:4.26:70,4,0	./.	1/1:0,9:9:3.01:114,3,0	0/0:10,0:10:20.69:0,21,317	0/1:15,0:15:99:135,0,377	0/1:10,0:10:54.63:55,0,337
chr10	24102725	.	A	AATAATAATG	1119.57	PASS	AB=1.000;AC=8;AF=0.148;AN=54;BaseQRankSum=-4.305;DP=209;FS=11.148;HRun=0;HaplotypeScore=83.5397;InbreedingCoeff=0.3942;MQ=60.15;MQ0=2;MQRankSum=-2.077;QD=18.98;ReadPosRankSum=-2.012;VQSLOD=1.0872;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:9,0:8:3.19:3,0,185	0/0:4,0:4:1.25:0,1,3	0/0:10,0:10:16.93:0,17,199	0/0:2,0:2:3.01:0,3,31	0/0:8,0:8:17.80:0,18,181	0/0:12,0:12:7.27:0,7,116	0/0:1,0:1:2.94:0,3,18	0/0:25,0:23:11.90:0,12,224	0/0:6,0:6:6.02:0,6,114	0/0:4,0:4:6.02:0,6,129	0/0:12,0:12:29.72:0,30,291	0/0:4,0:4:6.02:0,6,126	0/0:7,0:7:6.02:0,6,125	0/0:2,0:2:3:0,3,29	0/0:4,0:4:12.04:0,12,359	0/0:2,0:2:6.01:0,6,116	0/1:14,0:14:36.39:36,0,92	0/0:8,0:8:6.02:0,6,170	0/0:11,0:11:22.23:0,22,287	0/0:11,0:11:20.84:0,21,197	0/0:2,0:2:3.01:0,3,66	0/0:2,0:2:3.01:0,3,63	0/0:3,0:3:1.55:0,2,4	./.	0/0:9,0:9:3.01:0,3,63	1/1:1,7:10:18.30:250,18,0	1/1:14,1:15:44.67:494,45,0	1/1:10,1:11:29.78:476,30,0
chr10	24102727	.	TAACAACAAC	T	4671.87	PASS	AB=0.887;AC=42;AF=0.750;AN=56;BaseQRankSum=1.126;DP=213;FS=19.112;HRun=0;HaplotypeScore=66.5231;InbreedingCoeff=0.3899;MQ=60.62;MQ0=2;MQRankSum=-0.963;QD=25.53;ReadPosRankSum=-0.116;VQSLOD=2.4146;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:7,0:8:3.41:3,0,243	1/1:4,0:4:3:28,3,0	0/0:10,0:10:11.62:0,12,615	0/0:5,0:5:15.05:0,15,430	1/1:8,0:8:21:380,21,0	1/1:12,0:12:9.02:175,9,0	0/1:2,0:2:1.78:49,0,2	1/1:25,0:23:53.18:1000,53,0	1/1:6,0:6:6.02:147,6,0	1/1:3,1:4:12.02:230,12,0	1/1:3,10:13:18.06:384,18,0	1/1:4,0:4:6.02:147,6,0	1/1:7,0:7:6.02:147,6,0	1/1:2,0:2:3.01:73,3,0	0/0:4,0:4:12.04:0,12,429	0/0:2,0:2:6.02:0,6,219	1/1:4,8:12:6.49:149,6,0	1/1:1,9:10:2.85:90,3,0	1/1:1,10:11:30.10:716,30,0	1/1:9,2:11:21.07:383,21,0	1/1:0,2:2:3.01:90,3,0	1/1:2,0:2:3.01:73,3,0	1/1:3,0:3:4.25:29,4,0	1/1:1,0:1:3.01:51,3,0	1/1:9,0:9:3.01:73,3,0	0/0:9,0:9:17.68:0,18,193	0/1:13,0:15:99:177,0,220	0/1:9,0:11:77.52:78,0,202
chr10	24103432	.	A	AAGCAAAAGAAAAATCTGTATGGC	101121.32	PASS	AB=1.000;AC=41;AF=0.732;AN=56;BaseQRankSum=7.783;DP=783;FS=0.601;HRun=0;HaplotypeScore=446.6470;InbreedingCoeff=0.9035;MQ=61.37;MQ0=0;MQRankSum=-19.861;QD=178.03;ReadPosRankSum=0.210;VQSLOD=4.0565;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,144,8172	1/1:8,2:12:27.09:1571,27,0	0/0:27,0:26:72.22:0,72,2914	0/0:29,0:29:80.28:0,80,2961	1/1:25,15:41:96.27:6792,96,0	1/1:18,7:28:69.23:4990,69,0	1/1:22,2:28:63.21:4458,63,0	1/1:49,0:49:99:8561,138,0	1/1:21,4:26:69.24:4776,69,0	1/1:29,8:40:99:9178,108,0	1/1:26,5:33:87.30:5558,87,0	1/1:13,9:22:51.17:3489,51,0	1/1:35,7:43:99:8992,120,0	1/1:23,6:33:81.28:6473,81,0	0/0:30,0:30:87.28:0,87,4598	0/0:24,0:23:72.23:0,72,3732	1/1:14,5:20:51.14:3935,51,0	1/1:9,3:12:27.56:2183,28,0	1/1:14,5:22:48.16:3494,48,0	1/1:22,15:38:93.32:7479,93,0	1/1:4,2:8:12.04:1042,12,0	1/1:16,8:25:69.24:5228,69,0	1/1:13,4:17:51.18:3760,51,0	1/1:14,3:18:39.13:3062,39,0	1/1:19,6:24:69.24:5847,69,0	0/1:27,0:27:99:253,0,4229	0/0:31,0:31:87.28:0,87,4533	0/0:23,0:23:63.22:0,63,3734
chr10	24103710	.	T	TC	16570.53	PASS	AB=0.933;AC=41;AF=0.732;AN=56;BaseQRankSum=-8.353;DP=562;FS=4.375;HRun=0;HaplotypeScore=54.5970;InbreedingCoeff=0.9195;MQ=79.39;MQ0=0;MQRankSum=-6.222;QD=41.12;ReadPosRankSum=1.635;VQSLOD=5.4710;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:84.26:0,84,1155	1/1:0,7:7:15.05:239,15,0	0/0:25,0:25:65.34:0,65,862	0/0:5,0:5:12.04:0,12,165	1/1:1,33:34:93.32:1482,93,0	1/1:0,25:25:69.17:1073,69,0	1/1:1,14:15:36.12:575,36,0	1/1:1,19:20:57.18:887,57,0	1/1:0,15:16:42.07:640,42,0	1/1:1,34:35:99:1580,99,0	1/1:0,30:30:72.09:1086,72,0	1/1:0,20:20:45.15:719,45,0	1/1:0,27:27:78.27:1246,78,0	1/1:0,11:11:33.11:527,33,0	0/0:19,0:19:54.15:0,54,718	0/1:13,1:14:5.83:6,0,503	1/1:0,19:19:57.19:911,57,0	1/1:0,12:12:36.12:575,36,0	1/1:0,19:19:57.09:872,57,0	1/1:0,27:27:72.19:1120,72,0	1/1:0,9:9:24.08:384,24,0	1/1:1,16:17:45.07:687,45,0	1/1:0,18:18:51.17:814,51,0	1/1:0,10:10:24.08:383,24,0	1/1:0,18:18:48.16:765,48,0	0/0:26,0:26:75.25:0,75,1049	0/0:39,0:38:99:0,105,1468	0/0:16,0:16:48.16:0,48,669
chr10	24104377	.	CA	C	12037.14	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=15.501;DP=557;FS=13.702;HRun=5;HaplotypeScore=73.7621;InbreedingCoeff=0.9564;MQ=71.61;MQ0=0;MQRankSum=-3.174;QD=31.10;ReadPosRankSum=-0.090;VQSLOD=4.0381;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:81.27:0,81,1108	1/1:0,5:5:12.03:136,12,0	0/0:11,0:11:24.08:0,24,328	0/0:16,0:16:42.13:0,42,549	1/1:2,29:31:81.10:919,81,0	1/1:1,24:25:69.20:783,69,0	1/1:1,16:17:42.12:476,42,0	1/1:2,25:27:75.21:851,75,0	1/1:0,17:17:45.13:510,45,0	1/1:0,32:32:96.26:1078,96,0	1/1:0,14:14:39.11:439,39,0	1/1:0,21:21:57.16:647,57,0	1/1:1,24:25:66.19:748,66,0	1/1:1,18:19:57.16:641,57,0	0/0:32,0:32:96.31:0,96,1299	0/0:16,0:16:48.16:0,48,657	1/1:0,14:14:36.10:408,36,0	1/1:0,10:10:24.07:272,24,0	1/1:0,19:19:57.13:627,57,0	1/1:1,18:19:51.14:576,51,0	1/1:2,15:17:42.12:476,42,0	1/1:0,19:19:51.15:578,51,0	1/1:0,22:22:66.19:749,66,0	1/1:0,12:12:36.10:408,36,0	1/1:1,21:22:63.18:715,63,0	0/0:21,2:23:1.34:0,1,781	0/0:26,0:26:78.25:0,78,1051	0/0:18,0:18:42.14:0,42,575
chr10	24104515	.	TG	T	9351.66	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=15.854;DP=505;FS=1.627;HRun=1;HaplotypeScore=133.6751;InbreedingCoeff=0.9913;MQ=57.30;MQ0=1;MQRankSum=-2.407;QD=27.34;ReadPosRankSum=2.900;VQSLOD=4.8780;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:92.69:0,93,1506	1/1:2,7:9:24.01:241,24,0	0/0:9,0:7:21.04:0,21,251	0/0:12,0:11:30.09:0,30,410	1/1:5,20:25:66.12:679,66,0	1/1:2,21:23:60.15:635,60,0	1/1:2,6:8:18.05:190,18,0	1/1:8,25:33:75.18:789,75,0	1/1:2,9:11:27.07:285,27,0	1/1:2,25:27:75.19:793,75,0	1/1:2,21:23:63.16:666,63,0	1/1:3,11:14:33.08:344,33,0	1/1:3,18:21:57.10:590,57,0	1/1:0,12:12:36.09:379,36,0	0/0:20,0:20:57.16:0,57,793	0/0:15,0:15:45.10:0,45,599	1/1:2,7:9:15.04:158,15,0	1/1:0,5:5:15.04:159,15,0	1/1:1,16:17:45.10:469,45,0	1/1:0,23:23:69.07:701,69,0	1/1:0,13:13:39.10:413,39,0	1/1:1,8:9:24.06:253,24,0	1/1:2,17:19:51.13:539,51,0	1/1:3,8:11:27.06:278,27,0	1/1:6,24:30:75.19:790,75,0	0/0:31,0:30:90.26:0,90,1256	0/0:26,0:26:77.98:0,78,1086	0/0:10,0:10:27.09:0,27,391
chr10	24105213	.	C	CT	11202.26	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=6.788;DP=596;FS=3.253;HRun=8;HaplotypeScore=82.3375;InbreedingCoeff=0.9623;MQ=58.89;MQ0=0;MQRankSum=3.733;QD=27.06;ReadPosRankSum=0.540;VQSLOD=5.3258;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:75.03:0,75,686	1/1:1,6:7:18.05:208,18,0	0/0:14,0:12:2.30:0,2,158	0/0:12,0:10:18:0,18,165	1/1:5,23:27:63.11:698,63,0	1/1:2,21:22:42.12:485,42,0	1/1:1,11:12:30.09:346,30,0	1/1:4,19:23:57.09:640,57,0	1/1:1,11:10:27.08:312,27,0	1/1:3,34:37:96.26:1089,96,0	1/1:1,25:26:69.20:788,69,0	1/1:2,11:14:33.09:375,33,0	1/1:0,22:22:57.13:643,57,0	1/1:1,27:26:66.20:762,66,0	0/0:39,0:39:99:0,99,901	0/0:20,0:20:47.72:0,48,439	1/1:5,22:27:57.13:643,57,0	1/1:0,9:9:27.08:309,27,0	1/1:2,13:14:42.12:478,42,0	1/1:3,15:18:20.64:475,21,0	1/1:4,12:16:33.10:381,33,0	1/1:2,17:19:51.15:589,51,0	1/1:1,19:21:57:638,57,0	1/1:4,16:20:30.09:346,30,0	1/1:6,30:36:87.26:999,87,0	0/0:34,0:34:81.02:0,81,738	0/0:25,0:25:53.95:0,54,494	0/0:7,0:7:21.01:0,21,192
chr10	24105306	.	G	GGGGTGTGT	1610.58	PASS	AB=0.873;AC=18;AF=0.333;AN=54;BaseQRankSum=4.974;DP=466;FS=1.313;HRun=0;HaplotypeScore=125.9621;InbreedingCoeff=-0.0936;MQ=53.04;MQ0=16;MQRankSum=-3.936;QD=7.06;ReadPosRankSum=0.375;VQSLOD=2.3120;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:23:27.53:0,28,396	0/1:6,0:8:25.88:189,0,26	0/0:35,0:17:40.55:0,41,623	0/0:34,0:23:25.39:0,25,717	0/0:15,0:15:11.98:0,12,99	0/1:18,0:16:21.88:246,0,22	0/0:8,0:6:6.43:0,6,46	0/1:17,0:15:99:152,0,149	0/1:11,0:9:36.87:37,0,98	0/1:18,0:15:84.08:84,0,206	0/1:16,0:15:88.07:88,0,100	0/1:12,0:11:9.97:52,0,10	0/1:16,0:14:99:140,0,103	0/1:16,0:13:45.09:45,0,48	0/0:22,0:22:44.38:0,44,818	0/0:17,0:15:42.11:0,42,1056	./.	0/1:4,0:4:13.13:64,0,13	0/1:14,0:11:67.80:68,0,186	1/1:10,0:10:3.01:58,3,0	0/0:10,0:9:8.98:0,9,72	0/0:6,0:6:5.92:0,6,44	0/0:12,0:15:16.49:0,16,122	0/0:10,0:8:0.47:0,0,1	0/0:24,0:21:14.75:0,15,116	0/1:5,1:19:11.53:426,0,12	1/1:4,13:18:2.66:6,3,0	1/1:5,0:5:14.92:114,15,0
chr10	24105470	.	G	GTA	13630.59	PASS	AB=0.625;AC=39;AF=0.696;AN=56;BaseQRankSum=3.369;DP=626;FS=3.926;HRun=0;HaplotypeScore=100.6257;InbreedingCoeff=0.9124;MQ=48.32;MQ0=21;MQRankSum=2.327;QD=32.61;ReadPosRankSum=3.690;VQSLOD=7.0011;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:37:75.24:0,75,1087	1/1:0,11:10:23.98:449,24,0	0/0:22,0:11:29.95:0,30,388	0/0:17,0:13:36.09:0,36,499	1/1:1,24:23:42.14:787,42,0	1/1:2,23:22:36.12:674,36,0	1/1:1,11:11:18.06:317,18,0	1/1:6,5:6:14.97:192,15,0	1/1:3,11:9:21.07:393,21,0	1/1:1,33:33:93.10:1653,93,0	1/1:1,24:25:36.12:674,36,0	1/1:2,13:11:15.05:280,15,0	1/1:2,26:26:51.17:934,51,0	1/1:3,31:31:57.20:1066,57,0	0/0:28,0:26:63.20:0,63,907	0/0:29,0:27:69.23:0,69,1012	1/1:1,19:20:36.12:674,36,0	1/1:1,21:20:45.15:843,45,0	0/1:4,6:6:11.85:210,0,12	1/1:3,16:17:33.11:618,33,0	1/1:2,17:19:36.12:674,36,0	1/1:3,27:29:45.15:837,45,0	1/1:2,9:10:21.07:393,21,0	1/1:1,18:18:42.14:786,42,0	1/1:4,23:24:63.22:1180,63,0	0/0:32,0:28:34.45:0,34,1100	0/0:25,0:23:66.22:0,66,962	0/0:14,0:14:39.13:0,39,570
chr10	24105687	.	AG	A	16463.57	PASS	AB=0.524;AC=39;AF=0.696;AN=56;BaseQRankSum=16.675;DP=644;FS=15.122;HRun=1;HaplotypeScore=135.0089;InbreedingCoeff=0.9131;MQ=53.78;MQ0=4;MQRankSum=-1.848;QD=36.50;ReadPosRankSum=-0.035;VQSLOD=2.7809;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,111,1772	1/1:0,13:12:36.12:503,36,0	0/0:29,0:20:60.20:0,60,955	0/0:24,0:23:57.97:0,58,920	1/1:0,20:19:42.10:559,42,0	1/1:0,32:32:90.30:1258,90,0	1/1:0,16:16:45.15:623,45,0	1/1:2,26:18:42.10:550,42,0	1/1:0,22:22:66.22:923,66,0	1/1:1,26:27:81.26:1117,81,0	1/1:1,24:25:66.17:884,66,0	1/1:0,21:21:63.21:881,63,0	1/1:0,25:25:69.23:965,69,0	1/1:0,23:23:60.20:839,60,0	0/0:25,0:25:75.24:0,75,1174	0/0:23,0:23:69.23:0,69,1093	1/1:1,32:33:90.30:1258,90,0	1/1:0,13:13:36.12:503,36,0	0/1:1,10:11:14.79:386,0,15	1/1:0,19:19:51.17:712,51,0	1/1:0,28:28:81.27:1132,81,0	1/1:1,29:29:72.20:983,72,0	1/1:0,20:20:54.18:753,54,0	1/1:0,14:14:36.12:503,36,0	1/1:0,31:30:81.27:1131,81,0	0/0:17,1:18:12.21:0,12,764	0/0:25,0:25:75.26:0,75,1198	0/0:12,0:12:36.12:0,36,575
chr10	24105785	.	ATT	A	15825.14	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=15.334;DP=645;FS=9.837;HRun=5;HaplotypeScore=136.3680;InbreedingCoeff=0.9798;MQ=57.76;MQ0=2;MQRankSum=-3.341;QD=34.63;ReadPosRankSum=1.447;VQSLOD=3.4927;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,108,1920	1/1:0,6:5:6.02:84,6,0	0/0:17,0:17:48.12:0,48,790	0/0:23,0:23:60.20:0,60,1001	1/1:4,13:16:36.12:502,36,0	1/1:1,25:26:66.22:923,66,0	1/1:0,18:18:45.15:630,45,0	1/1:1,34:33:90.29:1239,90,0	1/1:3,22:25:42.29:846,42,0	1/1:1,35:36:99:1469,105,0	1/1:0,21:21:45.15:629,45,0	1/1:0,24:24:66.22:923,66,0	1/1:1,29:30:78.26:1091,78,0	1/1:1,24:24:66.22:923,66,0	0/0:24,0:24:72.25:0,72,1320	0/0:20,0:20:57.20:0,57,1042	1/1:3,36:39:99:1427,102,0	1/1:3,10:13:15.15:438,15,0	1/1:3,19:19:50.90:672,51,0	1/1:3,22:24:54.18:756,54,0	1/1:4,25:29:63.21:881,63,0	1/1:0,14:14:36.12:504,36,0	1/1:4,9:12:33.11:459,33,0	1/1:1,18:19:48.16:672,48,0	1/1:0,20:19:54.18:756,54,0	0/0:23,1:24:27.23:0,27,1165	0/0:29,0:29:87.30:0,87,1585	0/0:13,0:13:39.13:0,39,715
chr10	24106650	.	C	CT	9927.87	PASS	AB=1.000;AC=42;AF=0.750;AN=56;BaseQRankSum=14.625;DP=531;FS=0.377;HRun=9;HaplotypeScore=134.4639;InbreedingCoeff=0.7816;MQ=64.37;MQ0=0;MQRankSum=-6.460;QD=25.07;ReadPosRankSum=-3.174;VQSLOD=2.5774;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:95.98:0,96,833	1/1:1,5:6:15.04:166,15,0	0/1:12,0:12:14.12:14,0,43	0/1:7,0:6:13.90:14,0,36	1/1:9,39:49:99:1272,118,0	1/1:4,17:21:51.13:557,51,0	1/1:2,7:9:21.06:232,21,0	1/1:8,29:37:83.39:874,83,0	1/1:3,9:12:27.07:299,27,0	1/1:7,18:25:54.14:593,54,0	1/1:0,21:21:54.15:597,54,0	1/1:2,11:13:36.10:398,36,0	1/1:1,18:20:53.98:578,54,0	1/1:6,19:25:57.15:630,57,0	0/0:22,0:22:59.97:0,60,517	0/0:18,0:18:47.97:0,48,413	1/1:3,8:11:21.06:232,21,0	1/1:0,11:11:27.07:298,27,0	1/1:6,15:21:18.65:408,19,0	1/1:3,27:30:78.21:862,78,0	1/1:0,1:1:3.01:33,3,0	1/1:3,17:20:51.14:564,51,0	1/1:4,14:18:42.11:463,42,0	1/1:1,7:8:21.06:232,21,0	1/1:0,18:19:56.99:611,57,0	0/0:35,0:35:95.96:0,96,831	0/0:22,0:22:65.99:0,66,573	0/0:6,0:6:18:0,18,156
chr10	24107227	.	A	AC	1736.62	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-9.860;DP=674;FS=6.326;HRun=5;HaplotypeScore=99.6528;InbreedingCoeff=0.9931;MQ=86.28;MQ0=0;MQRankSum=-2.075;QD=31.57;ReadPosRankSum=1.828;VQSLOD=3.7763;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:99:0,99,1042	0/0:9,0:9:27.07:0,27,287	0/0:43,0:43:99:0,102,1040	0/0:18,0:17:37.61:0,38,377	0/0:24,0:24:72.15:0,72,761	0/0:32,0:32:90.17:0,90,929	0/0:24,0:24:63.03:0,63,627	0/0:35,0:35:87.19:0,87,916	0/0:25,0:25:72.18:0,72,773	0/0:25,0:25:69.14:0,69,724	0/0:22,0:22:63.16:0,63,676	0/0:24,0:24:69.16:0,69,732	0/0:20,0:20:51.12:0,51,547	0/0:23,0:23:69.17:0,69,741	0/0:25,0:25:69.11:0,69,707	0/0:28,0:28:75.17:0,75,797	0/0:27,0:27:78.12:0,78,807	0/0:9,0:9:26.98:0,27,265	0/0:29,0:29:66.99:0,67,685	0/0:30,0:30:90.23:0,90,964	0/0:24,0:24:69.15:0,69,727	0/0:14,0:14:39.10:0,39,419	0/0:19,0:19:54.03:0,54,562	0/0:23,0:23:66.14:0,66,691	0/0:34,0:34:99:0,99,1048	1/1:2,19:21:57.17:734,57,0	1/1:2,26:28:72.23:947,72,0	1/1:1,5:6:14.74:197,15,0
chr10	24107905	.	AC	A	17117.14	PASS	AB=0.902;AC=41;AF=0.732;AN=56;BaseQRankSum=13.835;DP=684;FS=7.126;HRun=1;HaplotypeScore=67.1231;InbreedingCoeff=0.9080;MQ=85.06;MQ0=0;MQRankSum=-6.971;QD=35.51;ReadPosRankSum=2.405;VQSLOD=5.0061;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,99,1550	1/1:0,8:8:24.08:336,24,0	0/0:39,0:39:99:0,108,1676	0/0:20,0:20:59.79:0,60,906	1/1:0,26:26:75.25:1043,75,0	1/1:0,28:28:75.25:1049,75,0	1/1:0,20:20:54.18:755,54,0	1/1:0,27:27:81.26:1117,81,0	1/1:0,18:18:48.16:671,48,0	1/1:1,36:37:99:1544,111,0	1/1:2,30:32:84.15:1102,84,0	1/1:0,22:22:63.21:881,63,0	1/1:0,33:33:90.30:1258,90,0	1/1:0,21:21:60.20:839,60,0	0/0:32,0:32:96.33:0,96,1525	0/0:33,0:33:99:0,99,1557	1/1:0,26:26:72.24:1007,72,0	1/1:0,9:9:27.09:371,27,0	1/1:0,14:14:42.14:588,42,0	1/1:2,24:26:75.21:1024,75,0	1/1:0,24:24:69.23:965,69,0	1/1:1,14:15:42.09:565,42,0	1/1:0,17:17:45.15:629,45,0	1/1:0,14:14:42.14:587,42,0	1/1:0,19:19:51.17:713,51,0	0/1:41,5:46:71.39:71,0,1811	0/0:35,0:35:99:0,105,1673	0/0:8,0:8:24.08:0,24,384
chr10	24107906	.	CA	C	6598.54	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=19.559;DP=690;FS=5.340;HRun=1;HaplotypeScore=106.6538;InbreedingCoeff=0.9989;MQ=84.85;MQ0=0;MQRankSum=-6.807;QD=14.96;ReadPosRankSum=2.787;VQSLOD=4.8654;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,99,1533	1/1:8,0:8:23.28:132,23,0	0/0:39,0:39:99:0,108,1627	0/0:20,0:20:60.10:0,60,926	1/1:27,0:27:72.58:408,73,0	1/1:28,0:28:73.11:439,73,0	1/1:21,0:21:30.19:254,30,0	1/1:28,0:28:50.93:351,51,0	1/1:19,0:19:49.50:281,49,0	1/1:37,1:38:81.77:539,82,0	1/1:30,2:32:75.24:459,75,0	1/1:22,0:22:60.77:337,61,0	1/1:33,0:33:87.17:503,87,0	1/1:21,0:21:58.01:323,58,0	0/0:32,0:32:96.29:0,96,1457	0/0:33,0:33:99:0,99,1556	1/1:26,0:26:69.87:400,70,0	1/1:9,0:9:26.63:180,27,0	1/1:14,0:14:39.96:206,40,0	1/1:25,1:26:69.91:418,70,0	1/1:24,0:24:66.67:369,67,0	1/1:14,1:15:40.50:243,40,0	1/1:17,0:17:43.68:266,44,0	1/1:14,0:14:40.53:222,41,0	1/1:19,0:19:49.20:271,49,0	0/0:47,0:47:64.88:0,65,1874	0/0:35,0:35:99:0,105,1653	0/0:8,0:8:24.08:0,24,384
chr10	24108291	.	T	TC	625.56	PASS	AB=0.538;AC=9;AF=0.161;AN=56;BaseQRankSum=-4.694;DP=500;FS=25.124;HRun=9;HaplotypeScore=72.7599;InbreedingCoeff=0.7506;MQ=73.98;MQ0=0;MQRankSum=-0.875;QD=9.34;ReadPosRankSum=-0.157;VQSLOD=0.4723;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:2,0:21:34.63:0,35,102	0/0:6,0:6:11.99:0,12,104	0/0:19,0:19:17.91:0,18,145	0/0:5,0:5:11.74:0,12,80	0/0:24,0:25:28.56:0,29,357	0/0:28,0:28:56.95:0,57,492	0/0:22,0:22:44.95:0,45,390	0/0:28,0:29:29.90:0,30,251	0/0:24,0:24:38.90:0,39,338	0/0:20,0:21:37.86:0,38,298	0/0:20,0:20:47.87:0,48,403	0/0:13,0:15:27.97:0,28,220	0/0:17,0:17:29.95:0,30,260	0/0:25,1:26:41.81:0,42,354	1/1:4,15:19:24.06:265,24,0	0/1:3,18:21:16.03:280,0,16	0/0:15,0:15:1.74:0,2,179	0/0:5,0:5:15:0,15,130	0/0:19,0:19:32.97:0,33,286	0/0:19,0:19:10.97:0,11,203	0/0:19,0:19:50.98:0,51,442	0/0:22,0:23:28.40:0,28,235	0/0:18,0:19:40.34:0,40,310	0/0:16,0:17:32.01:0,32,266	0/0:17,0:19:25.21:0,25,195	1/1:7,0:11:5.68:29,6,0	1/1:3,4:8:11.70:95,12,0	1/1:3,2:8:14.54:109,15,0
chr10	24108497	.	CT	C	10550.52	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=6.240;DP=508;FS=1.216;HRun=9;HaplotypeScore=86.9569;InbreedingCoeff=0.9836;MQ=74.40;MQ0=0;MQRankSum=-2.275;QD=23.45;ReadPosRankSum=2.502;VQSLOD=5.4791;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,13:13:39.02:357,39,0	1/1:0,7:7:15.01:137,15,0	0/0:13,0:13:27.07:0,27,295	0/0:8,0:8:20.04:0,20,191	1/1:2,23:26:68.06:610,68,0	1/1:2,18:20:54.03:494,54,0	1/1:2,10:12:27.01:247,27,0	1/1:4,21:25:60.01:545,60,0	1/1:3,15:18:39.01:357,39,0	1/1:1,23:24:69.04:632,69,0	1/1:1,19:20:54.03:494,54,0	1/1:1,15:16:39.01:357,39,0	1/1:2,21:23:60.03:549,60,0	1/1:1,21:22:57.03:522,57,0	0/0:21,0:21:54.16:0,54,623	0/0:16,0:16:39.05:0,39,426	1/1:2,16:18:42.02:384,42,0	1/1:2,14:16:39.01:357,39,0	1/1:3,10:13:29.80:260,30,0	1/1:0,29:30:89.04:794,89,0	1/1:1,7:8:21.01:192,21,0	1/1:0,15:15:42.02:384,42,0	1/1:2,24:26:69.04:632,69,0	1/1:4,14:18:42.02:384,42,0	1/1:4,23:27:66.03:604,66,0	1/1:4,19:23:57.01:518,57,0	1/1:1,24:25:69.03:632,69,0	1/1:0,5:5:12.01:110,12,0
chr10	24108590	.	T	TAA	12436.35	PASS	AB=1.000;AC=50;AF=0.893;AN=56;BaseQRankSum=-0.343;DP=563;FS=5.600;HRun=11;HaplotypeScore=93.5150;InbreedingCoeff=0.6908;MQ=68.82;MQ0=0;MQRankSum=-0.485;QD=24.15;ReadPosRankSum=-0.946;VQSLOD=4.4351;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,0:12:24.68:85,25,0	1/1:5,4:9:15.05:217,15,0	0/1:15,0:13:4.27:4,0,27	0/1:10,0:9:4.80:5,0,19	1/1:13,17:33:74.19:951,74,0	1/1:1,11:14:41.10:522,41,0	1/1:0,11:11:30.10:435,30,0	1/1:10,16:28:53.61:672,54,0	1/1:6,8:14:36.11:494,36,0	1/1:2,24:28:74.68:989,75,0	1/1:5,14:24:57.30:651,57,0	1/1:8,10:17:48.12:637,48,0	1/1:13,7:21:12.84:438,13,0	1/1:9,19:29:71.63:954,72,0	0/0:24,0:24:63.04:0,63,611	0/0:22,1:24:19.57:0,20,582	1/1:10,10:24:55.58:634,56,0	1/1:6,5:11:27.05:335,27,0	1/1:3,12:15:26.75:364,27,0	1/1:9,6:17:39.11:529,39,0	1/1:0,5:5:12.04:174,12,0	1/1:11,11:23:55.98:753,56,0	1/1:15,16:32:64.88:864,65,0	1/1:5,6:11:21.07:304,21,0	1/1:12,14:27:63.19:873,63,0	1/1:8,0:24:45.30:172,45,0	1/1:15,1:47:73.15:364,73,0	1/1:0,0:12:4.99:17,5,0
chr10	24109310	.	TA	T	2334.15	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.370;DP=557;FS=0.486;HRun=2;HaplotypeScore=51.2040;InbreedingCoeff=0.9961;MQ=84.96;MQ0=0;MQRankSum=-2.459;QD=32.88;ReadPosRankSum=1.793;VQSLOD=3.4329;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:36.12:0,36,539	0/0:7,0:7:21.07:0,21,315	0/0:23,0:23:66.22:0,66,965	0/0:12,0:12:30.10:0,30,425	0/0:32,0:32:96.33:0,96,1439	0/0:17,0:17:51.17:0,51,764	0/0:16,0:16:45.14:0,45,638	0/0:25,0:25:75.25:0,75,1107	0/0:11,0:11:33.11:0,33,494	0/0:22,0:22:66.22:0,66,989	0/0:27,0:27:81.27:0,81,1208	0/0:11,0:11:33.11:0,33,495	0/0:26,0:26:78.21:0,78,1142	0/0:28,0:28:81.27:0,81,1214	0/0:26,0:26:78.24:0,78,1129	0/0:26,0:26:78.26:0,78,1169	0/0:14,0:14:39.13:0,39,582	0/0:11,0:11:27.09:0,27,404	0/0:12,0:12:33.11:0,33,488	0/0:24,0:24:72.23:0,72,1053	0/0:11,0:11:33.11:0,33,495	0/0:21,0:21:60.20:0,60,899	0/0:24,0:24:72.24:0,72,1061	0/0:21,0:21:63.21:0,63,939	0/0:27,0:27:81.25:0,81,1187	1/1:0,23:23:66.19:841,66,0	1/1:1,39:40:99:1363,105,0	1/1:0,8:8:21.07:273,21,0
chr10	24109512	.	CA	C	178.28	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.928;DP=591;FS=0.988;HRun=9;HaplotypeScore=81.7755;InbreedingCoeff=0.9523;MQ=78.94;MQ0=0;MQRankSum=-0.032;QD=13.71;ReadPosRankSum=-1.263;VQSLOD=3.5224;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,12:13:29.83:273,30,0	0/0:6,0:6:18.05:0,18,208	0/0:34,0:23:33.02:0,33,426	0/0:45,0:26:36.20:0,36,286	0/0:30,0:30:84.24:0,84,962	0/0:20,0:20:26.83:0,27,541	0/0:12,0:12:33.09:0,33,372	0/0:25,0:25:66.10:0,66,734	0/0:12,0:12:30.09:0,30,346	0/0:26,0:26:66.15:0,66,747	0/0:27,0:27:69.20:0,69,796	0/0:19,0:19:54.16:0,54,623	0/0:25,0:25:75.01:0,75,844	0/0:20,0:20:48.11:0,48,532	0/0:31,0:31:87.26:0,87,1004	0/0:20,0:20:45.12:0,45,511	0/0:18,0:18:42.08:0,42,469	0/0:12,0:12:33.09:0,33,371	0/0:24,0:24:66.13:0,66,745	0/0:22,0:22:57.17:0,57,658	0/0:4,0:4:12.04:0,12,138	0/0:15,0:15:42.12:0,42,485	0/0:31,0:31:81.24:0,81,934	0/0:6,0:6:18.05:0,18,208	0/0:21,1:22:32.71:0,33,630	0/0:21,0:21:57.15:0,57,641	0/0:31,0:31:90.27:0,90,1038	0/0:18,0:19:50.95:0,51,547
chr10	24111560	.	TTTG	T	2779.28	PASS	AB=1.000;AC=42;AF=0.750;AN=56;BaseQRankSum=5.190;DP=580;FS=5.454;HRun=0;HaplotypeScore=121.3908;InbreedingCoeff=0.7858;MQ=66.07;MQ0=12;MQRankSum=-1.492;QD=6.16;ReadPosRankSum=-0.226;VQSLOD=2.5491;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:32.84:0,33,915	1/1:12,0:12:15.54:62,16,0	0/0:23,0:19:53.09:0,53,690	0/0:12,0:9:20.42:0,20,301	1/1:28,0:26:47.14:214,47,0	1/1:18,1:18:31.37:158,31,0	1/1:20,1:20:33.59:165,34,0	1/1:25,0:25:39.27:157,39,0	1/1:23,0:23:33.53:130,34,0	1/1:25,0:21:45.99:228,46,0	1/1:29,0:27:46.54:236,47,0	1/1:16,0:15:25.86:101,26,0	1/1:13,1:13:16.03:110,16,0	1/1:11,0:11:18.16:71,18,0	0/0:26,0:26:78.22:0,78,1513	0/0:19,0:19:54.11:0,54,888	1/1:20,0:20:28.01:114,28,0	1/1:15,0:14:17.80:68,18,0	1/1:18,0:17:24.19:133,24,0	1/1:34,0:34:69.76:349,70,0	1/1:17,0:17:25.86:101,26,0	1/1:15,1:15:31.99:171,32,0	1/1:20,0:20:22.95:90,23,0	1/1:18,0:17:33.55:130,34,0	1/1:25,0:24:26.02:108,26,0	0/1:32,0:31:35.52:36,0,51	0/0:27,0:27:8.16:0,8,78	0/1:13,0:13:34.55:42,0,35
chr10	24111561	.	TTG	T	11235.97	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=8.071;DP=577;FS=6.160;HRun=0;HaplotypeScore=82.8479;InbreedingCoeff=0.9429;MQ=66.28;MQ0=12;MQRankSum=-0.988;QD=23.70;ReadPosRankSum=0.571;VQSLOD=4.8045;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:57.59:0,58,825	1/1:0,11:11:23.96:300,24,0	0/0:24,0:20:56.43:0,56,685	0/0:12,0:9:2.53:0,3,244	1/1:3,25:26:65.57:762,66,0	1/1:2,17:18:36.09:497,36,0	1/1:1,20:20:39.10:533,39,0	1/1:2,22:24:60.07:724,60,0	1/1:1,22:23:39.13:560,39,0	1/1:11,13:20:57.11:713,57,0	1/1:1,28:27:68.28:783,68,0	1/1:0,15:14:30.10:433,30,0	1/1:3,11:13:23.64:292,24,0	1/1:1,10:11:21.07:303,21,0	0/0:26,0:26:78.23:0,78,1255	0/0:19,0:19:57.12:0,57,794	1/1:1,19:20:38.72:526,39,0	1/1:2,13:14:21.06:287,21,0	1/1:2,14:15:33.02:410,33,0	1/1:1,33:34:86.66:1047,87,0	1/1:2,15:17:30.10:433,30,0	1/1:1,15:15:39.02:494,39,0	1/1:1,19:20:26.95:388,27,0	1/1:0,18:18:39.13:561,39,0	1/1:4,21:24:36.18:487,36,0	1/1:30,2:31:56.21:370,56,0	1/1:28,1:29:30.87:195,31,0	1/1:12,1:13:11.19:138,11,0
chr10	24111562	.	TG	T	7530.22	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=9.780;DP=566;FS=6.164;HRun=1;HaplotypeScore=85.4536;InbreedingCoeff=0.9480;MQ=65.82;MQ0=12;MQRankSum=-0.282;QD=16.23;ReadPosRankSum=0.346;VQSLOD=4.7495;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:60.36:0,60,672	1/1:11,0:11:23.63:153,24,0	0/0:24,0:20:51.31:0,51,659	0/0:11,1:9:2.07:0,2,197	1/1:25,2:25:65.05:441,65,0	1/1:19,0:18:35.36:220,35,0	1/1:21,0:20:38.10:232,38,0	1/1:22,0:22:59.17:403,59,0	1/1:22,1:23:38.33:240,38,0	1/1:24,0:20:56.32:396,56,0	1/1:28,1:27:67.97:457,68,0	1/1:15,0:14:29.53:187,30,0	1/1:13,1:13:23.65:171,24,0	1/1:10,0:10:20.66:130,21,0	0/0:26,0:26:78.22:0,78,1019	0/0:19,0:19:57.12:0,57,684	1/1:19,1:20:38.39:263,38,0	1/1:15,0:14:20.70:133,21,0	1/1:14,0:13:32.63:223,33,0	1/1:33,1:34:85.87:586,86,0	1/1:16,1:17:29.60:196,30,0	1/1:16,0:15:41.33:263,41,0	1/1:19,0:19:26.54:167,27,0	1/1:18,0:17:38.35:241,38,0	1/1:23,0:22:38.50:274,38,0	1/1:14,18:31:85.55:1039,86,0	1/1:2,26:28:54.92:746,55,0	1/1:7,6:13:30.79:370,31,0
chr10	24114390	.	A	AT	2153.44	PASS	AB=0.844;AC=15;AF=0.268;AN=56;BaseQRankSum=-9.632;DP=402;FS=2.127;HRun=9;HaplotypeScore=43.7177;InbreedingCoeff=0.7076;MQ=80.17;MQ0=2;MQRankSum=-0.783;QD=16.96;ReadPosRankSum=-0.250;VQSLOD=3.2743;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:6:14.98:0,15,127	0/0:2,0:2:6:0,6,52	0/0:21,0:17:29.56:0,30,232	0/1:12,0:11:13.40:13,0,62	0/0:14,0:14:38.97:0,39,334	0/0:11,0:11:29.98:0,30,260	0/0:10,0:10:26.98:0,27,234	0/0:31,0:31:68.95:0,69,593	0/0:15,0:15:38.98:0,39,339	1/1:1,11:12:33.09:365,33,0	1/1:0,12:12:36.08:389,36,0	0/0:15,0:15:38.98:0,39,339	0/0:12,0:12:26.99:0,27,234	0/0:17,0:18:53.01:0,53,445	0/0:20,0:20:53.97:0,54,469	0/0:8,0:8:17.98:0,18,156	0/1:3,6:9:28.05:175,0,28	1/1:1,11:12:30.08:330,30,0	1/1:4,14:18:44.77:460,45,0	1/1:3,12:15:36.09:394,36,0	1/1:1,9:10:18.05:199,18,0	0/0:13,0:13:35.98:0,36,309	0/0:17,0:17:47.99:0,48,417	0/0:10,0:10:23.70:0,24,208	0/0:15,0:15:35.96:0,36,308	0/1:6,2:27:21.68:22,0,69	0/0:3,0:24:40.73:0,41,120	0/0:4,0:13:18.32:0,18,54
chr10	24114533	.	A	AAT	578.88	PASS	AC=18;AF=0.600;AN=30;BaseQRankSum=-0.441;DP=133;FS=3.938;HRun=0;HaplotypeScore=26.9674;InbreedingCoeff=0.4954;MQ=94.86;MQ0=2;MQRankSum=-1.932;QD=9.19;ReadPosRankSum=0.320;VQSLOD=2.4978;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:3,0:6:5.68:0,6,28	./.	1/1:10,0:6:2.70:27,3,0	0/0:20,0:13:9.88:0,10,72	./.	./.	./.	1/1:25,0:24:42.94:355,43,0	0/0:1,0:1:1.25:0,1,3	1/1:1,0:1:3:27,3,0	./.	./.	./.	1/1:1,0:3:2.50:9,2,0	0/0:5,0:5:8.98:0,9,90	0/0:3,0:3:4.56:0,5,40	0/0:4,0:4:0:0,0,0	1/1:6,0:6:5.44:27,5,0	./.	./.	./.	./.	./.	./.	1/1:4,0:4:2.50:9,2,0	1/1:4,3:7:6.02:95,6,0	1/1:2,3:5:6.02:95,6,0	1/1:1,1:2:3.01:48,3,0
chr10	24114661	.	AT	A	4679.52	PASS	AB=0.938;AC=50;AF=0.893;AN=56;BaseQRankSum=1.615;DP=259;FS=5.137;HRun=9;HaplotypeScore=36.8227;InbreedingCoeff=0.5711;MQ=88.75;MQ0=1;MQRankSum=-3.457;QD=20.00;ReadPosRankSum=1.192;VQSLOD=5.0151;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,5:5:12.01:110,12,0	1/1:0,2:2:6:55,6,0	0/0:11,0:11:14.88:0,15,188	0/1:14,0:12:4.08:4,0,156	1/1:0,18:18:48.02:439,48,0	1/1:3,6:9:18.01:165,18,0	1/1:0,7:7:18.01:165,18,0	1/1:2,14:16:42.01:384,42,0	1/1:2,9:11:21.01:192,21,0	1/1:0,9:9:27.01:247,27,0	1/1:0,7:7:21.01:192,21,0	1/1:0,2:2:6:55,6,0	1/1:1,9:10:24.01:220,24,0	1/1:0,6:6:18.01:165,18,0	0/1:6,1:7:9.41:9,0,155	0/0:14,0:14:39.11:0,39,442	1/1:1,6:8:20.05:171,20,0	1/1:2,5:7:15.01:137,15,0	1/1:2,13:15:39.02:357,39,0	1/1:0,11:11:32.97:294,33,0	1/1:0,6:6:18.01:165,18,0	1/1:1,8:9:24.01:220,24,0	1/1:0,8:8:17.88:165,18,0	1/1:1,4:5:6:55,6,0	1/1:1,6:7:18.01:165,18,0	1/1:1,9:10:27.01:247,27,0	1/1:3,15:18:30.01:275,30,0	1/1:2,5:7:3.47:28,3,0
chr10	24115689	.	G	GA	1446.07	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-7.722;DP=568;FS=5.013;HRun=9;HaplotypeScore=56.9216;InbreedingCoeff=0.9707;MQ=83.69;MQ0=0;MQRankSum=-1.916;QD=24.51;ReadPosRankSum=-0.316;VQSLOD=4.3437;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:59.95:0,60,521	0/0:12,0:12:32.99:0,33,287	0/0:21,0:21:28.23:0,28,316	0/0:17,0:17:38.95:0,39,329	0/0:25,0:25:50.63:0,51,601	0/0:23,1:24:26.81:0,27,462	0/0:16,0:16:44.97:0,45,386	0/0:34,0:35:86:0,86,735	0/0:17,0:17:44.99:0,45,391	0/0:24,0:24:65.97:0,66,573	0/0:24,0:24:56.97:0,57,495	0/0:11,0:11:26.98:0,27,234	0/0:18,0:18:47.98:0,48,417	0/0:20,0:20:56.97:0,57,491	0/0:21,0:21:30.96:0,31,443	0/0:17,0:17:41.97:0,42,365	0/0:20,0:20:17.79:0,18,377	0/0:4,0:4:9:0,9,78	0/0:22,0:22:53.96:0,54,467	0/0:20,1:21:20.79:0,21,410	0/0:20,0:20:56.98:0,57,495	0/0:25,0:25:71.97:0,72,621	0/0:27,0:27:71.96:0,72,621	0/0:17,0:17:41.98:0,42,365	0/0:23,1:24:35.80:0,36,540	1/1:3,18:21:34.97:592,35,0	1/1:5,27:31:71.94:796,72,0	1/1:0,6:6:18.05:199,18,0
chr10	24117474	.	G	GGTGT	2257.36	PASS	AB=0.933;AC=7;AF=0.125;AN=56;BaseQRankSum=-2.797;DP=858;FS=1.077;HRun=0;HaplotypeScore=186.6728;InbreedingCoeff=0.5016;MQ=59.47;MQ0=13;MQRankSum=-3.427;QD=16.24;ReadPosRankSum=-2.277;VQSLOD=2.9780;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:54:70.76:0,71,1418	0/1:14,0:15:2.07:2,0,183	0/0:50,0:25:3.96:0,4,64	0/1:50,0:20:3.08:15,0,3	0/0:33,0:33:45.29:0,45,613	0/0:25,0:25:19.27:0,19,250	0/0:19,0:19:21.01:0,21,272	0/0:28,0:28:31:0,31,443	0/0:26,0:24:38.99:0,39,548	0/0:33,0:34:52.08:0,52,802	0/0:23,0:23:24.06:0,24,371	0/0:29,0:30:23.37:0,23,340	0/0:23,0:23:28.25:0,28,335	0/0:34,0:33:9.78:0,10,401	0/0:33,0:34:75.16:0,75,1100	0/0:28,0:29:66.21:0,66,1028	0/0:26,0:26:37.85:0,38,487	0/0:19,0:18:16.98:0,17,232	0/0:30,0:29:11.29:0,11,661	0/0:33,0:33:59.91:0,60,888	0/0:68,0:68:46.16:0,46,1177	0/0:22,0:24:8.10:0,8,441	0/0:19,0:19:14.75:0,15,489	0/0:29,0:29:51.58:0,52,732	0/0:23,0:24:36.05:0,36,488	1/1:27,15:45:5.12:1540,5,0	0/1:12,4:15:25.66:376,0,26	1/1:5,6:12:20.86:452,21,0
chr10	24117512	.	C	CTGTG	15160.99	PASS	AB=0.789;AC=40;AF=0.714;AN=56;BaseQRankSum=-8.666;DP=932;FS=2.443;HRun=0;HaplotypeScore=183.2138;InbreedingCoeff=0.7743;MQ=51.10;MQ0=23;MQRankSum=0.479;QD=23.47;ReadPosRankSum=-0.001;VQSLOD=4.2679;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:48:93.78:0,94,1506	1/1:3,10:13:21.05:441,21,0	0/0:79,0:14:11.89:0,12,119	0/0:78,0:13:12.09:0,12,106	1/1:5,26:33:23.59:545,24,0	1/1:4,12:16:9.03:216,9,0	1/1:4,19:25:20.75:520,21,0	1/1:12,14:26:45.13:818,45,0	1/1:14,13:24:11.49:773,11,0	1/1:13,19:32:59.85:1131,60,0	1/1:6,12:19:9.01:223,9,0	1/1:4,27:32:38.81:906,39,0	1/1:3,13:21:23.97:536,24,0	1/1:12,34:48:59.72:1307,60,0	0/0:29,0:29:58.15:0,58,857	0/0:27,0:27:54.89:0,55,915	1/1:7,19:26:7.71:865,8,0	0/1:7,18:26:26.81:422,0,27	1/1:13,15:28:56.59:723,57,0	1/1:9,16:26:27.09:668,27,0	1/1:19,74:102:91.95:2130,92,0	1/1:6,16:26:28.84:675,29,0	1/1:3,13:15:18.06:446,18,0	1/1:21,18:40:62.57:1210,63,0	1/1:5,18:24:24.08:595,24,0	0/1:31,0:31:9.14:9,0,877	0/0:16,0:16:12.04:0,12,195	0/0:8,0:8:11.61:0,12,179
chr10	24117546	.	G	GGTGT	1917.93	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-1.776;DP=823;FS=5.416;HRun=0;HaplotypeScore=210.5276;InbreedingCoeff=0.7614;MQ=55.49;MQ0=11;MQRankSum=-2.966;QD=39.96;ReadPosRankSum=-1.280;VQSLOD=3.3191;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:55:99:0,123,1790	0/0:6,0:6:14.61:0,15,187	0/0:40,0:5:7.83:0,8,79	0/0:58,0:7:0.03:0,0,8	0/0:32,0:32:48.48:0,48,869	0/0:13,0:13:12.03:0,12,177	0/0:29,0:28:56.91:0,57,760	0/0:34,0:34:59.42:0,59,1162	0/0:26,0:25:56.96:0,57,772	0/0:28,0:28:30.95:0,31,937	0/0:9,0:10:14.88:0,15,227	0/0:30,0:32:43.79:0,44,876	0/0:23,0:23:37.29:0,37,670	0/0:44,0:43:74:0,74,1175	0/0:32,0:34:66.31:0,66,1363	0/0:30,0:30:72.22:0,72,1141	0/0:26,0:27:1.41:0,1,357	0/0:18,0:17:21.44:0,21,316	0/0:22,0:22:41.04:0,41,660	0/0:23,0:23:36.13:0,36,493	0/0:95,0:94:99:0,112,1864	0/0:19,0:19:23.72:0,24,348	0/0:20,0:19:8.07:0,8,447	0/0:37,0:36:56.99:0,57,933	0/0:18,0:18:35.70:0,36,511	1/1:9,15:27:7.47:1066,7,0	1/1:0,12:15:30.03:685,30,0	1/1:3,3:6:12.04:297,12,0
chr10	24117641	.	G	GGTGTGT	685.77	PASS	AB=0.942;AC=11;AF=0.196;AN=56;BaseQRankSum=-4.022;DP=828;FS=0.000;HRun=0;HaplotypeScore=254.5676;InbreedingCoeff=-0.0391;MQ=55.74;MQ0=11;MQRankSum=-0.595;QD=2.43;ReadPosRankSum=-3.772;VQSLOD=1.6701;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,24:39:21:554,21,0	0/0:4,0:4:9.03:0,9,144	0/0:41,0:11:5.22:0,5,43	0/0:44,0:13:5.11:0,5,25	0/0:31,0:31:3.85:0,4,560	0/1:18,0:17:15.54:16,0,245	0/1:32,0:32:28.53:29,0,490	0/1:35,0:33:78.21:135,0,78	0/0:23,0:21:30.62:0,31,440	0/0:19,0:19:24.33:0,24,233	0/0:23,0:22:7.57:0,8,489	0/0:37,0:38:43.65:0,44,567	0/1:24,0:24:0.61:1,0,441	0/1:31,0:31:7.21:7,0,385	0/0:32,0:32:66.10:0,66,1121	0/0:29,0:29:51.62:0,52,933	0/0:19,0:19:45.11:0,45,614	0/1:23,0:22:9.58:10,0,551	0/1:25,0:22:2.39:2,0,184	0/0:37,0:37:4.22:0,4,539	0/0:87,0:85:53.79:0,54,1493	0/0:20,0:20:34.15:0,34,393	0/0:25,0:25:15.79:0,16,416	0/0:42,0:41:50.97:0,51,751	0/0:23,0:24:18.75:0,19,294	0/1:19,0:27:24.77:25,0,42	0/1:15,0:25:47.70:48,0,111	0/0:2,0:7:4.78:0,5,67
chr10	24117663	.	AGT	A	4727.38	PASS	AB=0.942;AC=26;AF=0.464;AN=56;BaseQRankSum=-2.049;DP=836;FS=72.618;HRun=0;HaplotypeScore=194.5610;InbreedingCoeff=-0.1653;MQ=52.63;MQ0=17;MQRankSum=2.396;QD=7.71;ReadPosRankSum=-4.193;VQSLOD=1.6421;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:43:39.54:0,40,549	0/1:4,1:5:5.96:66,0,6	0/0:43,0:5:6.02:0,6,74	0/0:49,1:4:2.98:0,3,21	0/1:27,0:27:30.56:168,0,31	0/1:19,0:18:18.92:62,0,19	1/1:32,3:35:43.60:503,44,0	1/1:38,0:33:15.20:556,15,0	0/1:18,2:18:4.53:159,0,5	1/1:22,1:22:14.41:330,14,0	0/1:25,1:25:10.63:220,0,11	0/1:28,2:30:23.22:162,0,23	0/1:24,0:24:42.94:115,0,43	0/1:32,0:32:74.94:210,0,75	0/0:28,0:28:60.62:0,61,869	0/1:24,1:25:14.28:14,0,747	0/1:19,2:21:43.19:129,0,43	1/1:24,4:26:1.45:304,1,0	0/1:16,2:13:0.22:79,0,0	0/1:33,0:33:34.98:261,0,35	1/1:89,4:91:2.71:794,3,0	0/1:23,1:24:43.88:138,0,44	0/1:18,3:21:87.04:107,0,87	0/1:46,1:46:12.82:254,0,13	0/1:20,2:23:26.53:97,0,27	0/0:26,0:26:53.88:0,54,743	0/0:23,0:22:60.06:0,60,807	0/0:7,0:7:12.04:0,12,186
chr10	24122305	.	TCC	T	8030.52	PASS	AB=0.536;AC=25;AF=0.446;AN=56;BaseQRankSum=6.444;DP=541;FS=5.710;HRun=4;HaplotypeScore=96.0023;InbreedingCoeff=0.9281;MQ=59.10;MQ0=4;MQRankSum=3.378;QD=37.70;ReadPosRankSum=0.410;VQSLOD=4.0485;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,106,1949	1/1:0,12:12:30.10:442,30,0	0/0:23,0:12:36.12:0,36,646	0/0:23,0:20:57.20:0,57,1048	1/1:0,11:11:27.09:398,27,0	1/1:0,14:14:39.13:574,39,0	0/1:2,13:15:15.08:450,0,15	1/1:0,24:24:69.21:997,69,0	1/1:0,10:10:27.09:398,27,0	0/0:12,0:12:36.12:0,36,674	0/0:18,0:18:54.19:0,54,998	1/1:1,18:19:48.16:707,48,0	1/1:0,25:25:63.21:928,63,0	1/1:1,17:18:48.16:707,48,0	0/0:23,0:23:69.22:0,69,1261	0/0:22,1:23:25.05:0,25,1186	0/0:41,0:41:99:0,120,2208	0/0:18,0:18:54.18:0,54,965	0/0:22,0:19:54.17:0,54,981	0/0:22,0:22:66.23:0,66,1235	0/0:23,0:23:60.21:0,60,1124	1/1:0,13:13:36.12:530,36,0	1/1:0,22:22:63.21:928,63,0	1/1:2,13:15:33.06:486,33,0	1/1:2,13:15:33.11:486,33,0	0/0:17,0:17:51.16:0,51,922	0/0:21,0:21:60.21:0,60,1123	0/0:6,0:6:18.06:0,18,337
chr10	24123666	.	CT	C	1982.97	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-2.770;DP=606;FS=0.000;HRun=2;HaplotypeScore=101.5347;InbreedingCoeff=0.9951;MQ=74.26;MQ0=0;MQRankSum=-2.766;QD=32.51;ReadPosRankSum=-0.385;VQSLOD=3.1122;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:36.12:0,36,538	0/0:7,0:7:21.07:0,21,313	0/0:15,0:15:28.69:0,29,573	0/0:11,0:11:24.03:0,24,301	0/0:33,0:33:96.33:0,96,1438	0/0:24,0:24:72.23:0,72,1060	0/0:9,0:9:24.08:0,24,360	0/0:39,0:39:99:0,117,1719	0/0:27,0:27:75.25:0,75,1122	0/0:35,0:35:99:0,105,1574	0/0:24,0:24:72.22:0,72,1042	0/0:20,0:20:57.19:0,57,853	0/0:29,0:29:87.29:0,87,1295	0/0:34,0:34:99:0,99,1483	0/0:28,0:28:78.25:0,78,1147	0/0:13,0:13:39.13:0,39,584	0/0:12,0:12:30.08:0,30,449	0/0:8,0:8:21.07:0,21,315	0/0:17,0:17:51.16:0,51,747	0/0:37,0:37:99:0,111,1662	0/0:23,0:23:63.21:0,63,944	0/0:17,0:17:51.17:0,51,763	0/0:19,0:19:57.18:0,57,834	0/0:24,0:24:66.17:0,66,945	0/0:27,0:27:78.26:0,78,1169	1/1:1,26:27:69.21:880,69,0	1/1:1,19:20:54.18:701,54,0	1/1:0,14:14:42.14:545,42,0
chr10	24124324	.	CA	C	9010.20	PASS	AB=0.773;AC=48;AF=0.857;AN=56;BaseQRankSum=6.780;DP=457;FS=14.663;HRun=9;HaplotypeScore=48.2651;InbreedingCoeff=0.6512;MQ=75.09;MQ0=0;MQRankSum=-0.093;QD=21.71;ReadPosRankSum=1.189;VQSLOD=4.1464;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,13:13:36.02:329,36,0	1/1:2,6:8:18:165,18,0	0/1:10,0:10:21.66:22,0,91	0/0:6,0:7:6.38:0,6,52	1/1:1,21:22:63.03:577,63,0	1/1:4,23:27:63.03:577,63,0	1/1:1,8:9:21.01:192,21,0	1/1:5,27:32:78.04:713,78,0	1/1:0,14:14:42.02:384,42,0	1/1:3,19:22:54.01:489,54,0	1/1:1,17:18:48.02:439,48,0	1/1:2,16:18:45.02:412,45,0	1/1:3,20:23:44.99:412,45,0	1/1:2,10:12:24:220,24,0	0/0:20,0:20:48.13:0,48,544	0/0:15,0:15:39.11:0,39,442	1/1:1,15:16:36.02:330,36,0	1/1:1,11:12:30.02:275,30,0	1/1:4,21:25:64.58:577,65,0	1/1:0,17:17:45.01:412,45,0	1/1:0,12:12:33.02:302,33,0	0/1:1,5:6:14.86:119,0,15	1/1:3,13:16:36.02:330,36,0	1/1:0,3:3:9:82,9,0	1/1:0,17:18:50.06:445,50,0	1/1:2,19:21:54.02:494,54,0	1/1:2,29:31:69.04:632,69,0	1/1:7,3:10:9:82,9,0
chr10	24124692	.	A	ATT	9467.13	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=10.002;DP=513;FS=3.036;HRun=8;HaplotypeScore=112.0933;InbreedingCoeff=0.9845;MQ=73.12;MQ0=0;MQRankSum=-1.832;QD=21.47;ReadPosRankSum=1.975;VQSLOD=3.7197;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,30:34:78.22:1210,78,0	1/1:0,0:6:12.88:50,13,0	0/0:9,0:9:20.85:0,21,191	0/0:14,0:14:22.49:0,22,346	1/1:3,0:23:49.23:168,49,0	1/1:1,0:21:47.41:163,47,0	1/1:3,0:16:32.92:124,33,0	1/1:4,0:23:41.36:164,41,0	1/1:2,0:21:39.93:137,40,0	1/1:7,18:25:57.18:878,57,0	1/1:1,13:15:39.13:610,39,0	1/1:0,0:14:29.94:103,30,0	1/1:2,0:19:32.32:111,32,0	1/1:2,0:17:32.44:112,32,0	0/0:30,0:30:87.22:0,87,961	0/0:19,0:19:48.12:0,48,535	1/1:4,16:21:48.16:747,48,0	1/1:2,6:9:21.07:327,21,0	1/1:8,14:21:42.14:665,42,0	1/1:3,11:15:33.08:488,33,0	1/1:4,15:19:42.14:666,42,0	1/1:4,0:16:31.64:108,32,0	1/1:1,0:13:27.32:94,27,0	1/1:1,0:16:34.93:120,35,0	1/1:3,0:19:39.93:137,40,0	1/1:5,19:24:57.19:904,57,0	1/1:1,27:27:72.25:1143,72,0	1/1:0,5:5:15.05:238,15,0
chr10	24125009	.	C	CATATATATAT	1732.99	PASS	AB=1.000;AC=22;AF=0.611;AN=36;BaseQRankSum=0.674;DP=130;FS=17.927;HRun=0;HaplotypeScore=46.1777;InbreedingCoeff=0.2650;MQ=74.18;MQ0=0;MQRankSum=-3.847;QD=18.24;ReadPosRankSum=-0.516;VQSLOD=0.1166;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:6:14.98:0,15,124	1/1:2,0:2:3:25,3,0	0/1:3,0:3:0.82:1,0,41	0/1:9,0:8:3.01:3,0,19	./.	./.	./.	1/1:14,0:14:21.04:304,21,0	1/1:2,0:2:3:25,3,0	0/1:3,0:2:0:0,0,0	1/1:1,0:1:3:25,3,0	1/1:1,0:1:3:25,3,0	./.	./.	0/0:3,0:3:5.99:0,6,50	0/0:6,0:6:12.01:0,12,240	1/1:7,6:14:15.05:711,15,0	1/1:10,0:12:26.93:367,27,0	0/1:9,0:9:33.62:186,0,34	./.	./.	./.	1/1:4,0:3:3:25,3,0	./.	./.	0/0:5,0:5:11.86:0,12,113	0/1:15,0:15:99:100,0,161	0/1:6,0:6:11.99:66,0,12
chr10	24125019	.	C	CATATAT	1697.04	PASS	AB=1.000;AC=16;AF=0.667;AN=24;BaseQRankSum=-1.345;DP=104;FS=0.000;HRun=0;HaplotypeScore=36.9328;InbreedingCoeff=0.5042;MQ=81.24;MQ0=0;MQRankSum=-2.064;QD=24.96;ReadPosRankSum=-0.057;VQSLOD=2.4690;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:3,0:3:3.01:0,3,39	0/0:12,0:11:4.41:0,4,47	./.	./.	./.	1/1:8,0:8:7.36:21,7,0	./.	0/1:2,0:1:0:0,0,0	./.	./.	./.	./.	./.	0/0:4,0:4:6.02:0,6,131	1/1:9,0:9:9.50:236,10,0	1/1:14,0:14:23.99:521,24,0	0/1:8,0:8:3.47:44,0,3	./.	./.	./.	1/1:2,0:2:3:25,3,0	./.	./.	1/1:1,0:6:14.82:154,15,0	1/1:6,6:13:15.05:496,15,0	1/1:1,5:6:9.03:303,9,0
chr10	24125193	.	TCTC	T	5508.49	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=11.097;DP=437;FS=5.480;HRun=0;HaplotypeScore=65.9318;InbreedingCoeff=0.9783;MQ=66.17;MQ0=0;MQRankSum=-1.265;QD=41.11;ReadPosRankSum=1.877;VQSLOD=5.9084;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:86.62:0,87,2099	0/0:3,0:3:9.03:0,9,204	0/0:23,0:20:60.19:0,60,1244	0/0:23,0:22:48.20:0,48,1233	0/0:8,0:8:14.82:0,15,339	0/0:17,0:17:48.16:0,48,1088	0/0:16,0:16:44.98:0,45,966	0/0:19,0:19:54.19:0,54,1223	0/0:15,0:15:45.15:0,45,1020	1/1:1,14:14:39.12:623,39,0	1/1:0,11:11:27.09:450,27,0	0/0:12,0:12:36.12:0,36,816	0/0:16,0:16:45.15:0,45,1020	0/0:19,0:19:54.19:0,54,1224	0/0:13,0:13:36.11:0,36,775	0/0:14,0:14:42.14:0,42,952	1/1:0,23:23:51.17:850,51,0	1/1:0,19:18:54.18:899,54,0	1/1:1,13:14:39.12:618,39,0	1/1:1,8:9:18.02:270,18,0	1/1:0,43:43:99:1799,108,0	0/0:12,0:12:36.12:0,36,816	0/0:10,0:10:30.09:0,30,637	0/0:14,0:14:42.14:0,42,952	0/0:7,0:7:21.07:0,21,476	0/0:10,0:10:30.10:0,30,680	0/0:15,0:15:45.15:0,45,1018	0/0:4,0:4:12.04:0,12,272
chr10	24127841	.	GTTTT	G	8375.75	PASS	AB=0.528;AC=46;AF=0.821;AN=56;BaseQRankSum=-0.978;DP=359;FS=2.270;HRun=13;HaplotypeScore=72.5093;InbreedingCoeff=0.7325;MQ=74.49;MQ0=3;MQRankSum=-3.820;QD=27.46;ReadPosRankSum=5.595;VQSLOD=3.6817;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,0:8:6.22:16,6,0	1/1:0,7:7:15.03:212,15,0	0/0:21,0:14:29.28:0,29,335	0/0:13,0:8:9.89:0,10,43	1/1:2,23:25:63.17:921,63,0	1/1:3,6:9:15.01:219,15,0	1/1:2,3:5:9.01:132,9,0	1/1:5,18:23:54.04:721,54,0	1/1:2,8:10:24.07:351,24,0	1/1:1,16:17:48.16:699,48,0	1/1:2,12:15:37.34:529,37,0	1/1:1,10:11:27.08:395,27,0	1/1:2,9:11:24.06:351,24,0	1/1:1,4:5:9.03:132,9,0	0/0:10,0:12:33.10:0,33,687	0/0:6,0:8:24.07:0,24,461	1/1:0,11:12:31.35:442,31,0	1/1:1,13:14:30.07:438,30,0	1/1:2,12:14:36.10:507,36,0	1/1:8,10:19:28.25:398,28,0	1/1:0,7:7:18.04:263,18,0	1/1:1,8:10:24.05:351,24,0	1/1:1,8:9:18.06:263,18,0	1/1:0,7:7:18.06:263,18,0	1/1:2,14:17:40.36:566,40,0	0/1:1,1:15:4.35:94,0,4	1/1:2,0:21:20.38:54,20,0	0/1:2,1:14:6.85:57,0,7
chr10	24130200	.	TA	T	3723.20	PASS	AB=0.875;AC=50;AF=0.893;AN=56;BaseQRankSum=1.414;DP=230;FS=16.048;HRun=11;HaplotypeScore=28.8590;InbreedingCoeff=0.2994;MQ=61.77;MQ0=10;MQRankSum=-0.550;QD=17.16;ReadPosRankSum=3.535;VQSLOD=2.5563;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,13:14:23.96:197,24,0	1/1:0,2:2:5.99:49,6,0	0/0:8,0:2:3.48:0,3,33	0/1:9,0:8:29.69:30,0,61	1/1:2,10:11:0.97:213,1,0	1/1:2,3:5:8.98:74,9,0	1/1:1,2:3:5.99:49,6,0	1/1:3,12:15:6.61:238,7,0	1/1:0,6:6:14.98:123,15,0	1/1:2,4:6:11.98:99,12,0	1/1:1,13:14:7.28:263,7,0	1/1:1,4:5:11.99:99,12,0	1/1:0,6:6:11.98:98,12,0	1/1:1,8:9:17.97:147,18,0	0/0:5,0:5:14.98:0,15,139	0/1:1,1:3:15.79:16,0,37	1/1:0,17:17:47.95:394,48,0	1/1:1,7:7:17.98:148,18,0	1/1:1,10:11:1.28:210,1,0	1/1:1,6:7:17.98:148,18,0	1/1:2,2:3:5.89:41,6,0	1/1:0,1:1:2.99:24,3,0	1/1:1,7:7:11.90:98,12,0	1/1:1,6:7:20:151,20,0	1/1:1,10:11:29.96:246,30,0	1/1:3,13:16:40.49:324,40,0	1/1:0,7:7:17.97:147,18,0	1/1:4,4:5:11.97:99,12,0
chr10	24130678	.	TG	T	1800.77	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=3.760;DP=463;FS=5.546;HRun=1;HaplotypeScore=74.9707;InbreedingCoeff=0.9898;MQ=74.07;MQ0=1;MQRankSum=1.008;QD=34.63;ReadPosRankSum=0.984;VQSLOD=3.6337;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:54.17:0,54,803	0/0:10,0:10:30.07:0,30,435	0/0:10,0:10:27.96:0,28,375	0/0:7,0:7:18.06:0,18,265	0/0:16,0:16:48.13:0,48,687	0/0:21,0:21:63.20:0,63,942	0/0:6,0:6:18.06:0,18,276	0/0:35,0:35:99:0,105,1552	0/0:14,0:14:42.13:0,42,622	0/0:23,0:23:69.23:0,69,1057	0/0:33,0:33:99:0,99,1492	0/0:17,0:17:51.17:0,51,780	0/0:12,0:12:36.09:0,36,508	0/0:14,0:14:42.13:0,42,619	0/0:12,0:12:36.10:0,36,509	0/0:11,0:11:33.10:0,33,484	0/0:38,0:38:99:0,114,1696	0/0:17,0:17:50.70:0,51,665	0/0:22,0:22:65.96:0,66,969	0/0:20,0:20:60.19:0,60,896	0/0:13,0:13:39.12:0,39,572	0/0:7,0:7:21.06:0,21,300	0/0:10,0:10:30.09:0,30,436	0/0:8,0:8:24.08:0,24,367	0/0:17,0:17:51.10:0,51,693	1/1:0,24:23:69.17:896,69,0	1/1:0,20:20:54.18:755,54,0	1/1:0,8:8:21.07:293,21,0
chr10	24131059	.	TAC	T	312.19	PASS	AB=0.960;AC=8;AF=0.160;AN=50;BaseQRankSum=0.081;DP=515;FS=4.714;HRun=0;HaplotypeScore=84.2118;InbreedingCoeff=0.3142;MQ=67.86;MQ0=9;MQRankSum=2.184;QD=2.52;ReadPosRankSum=-1.412;VQSLOD=1.1837;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:11.98:0,12,125	0/0:5,0:5:1.25:0,1,3	./.	./.	0/1:28,1:29:14.08:14,0,114	0/0:19,0:19:10.10:0,10,182	0/1:18,1:19:17.71:26,0,18	0/0:21,0:20:2.70:0,3,7	0/0:11,0:11:11.98:0,12,99	0/0:20,0:24:23.68:0,24,225	0/0:19,0:19:18:0,18,176	0/0:22,0:22:17.98:0,18,165	0/0:14,0:11:12:0,12,122	0/0:8,0:8:2.98:0,3,22	0/1:11,1:12:14.03:14,0,171	0/1:13,0:12:36.32:36,0,83	0/0:19,0:19:26.34:0,26,222	0/0:20,0:22:25.88:0,26,224	0/0:13,0:11:17.52:0,18,135	0/0:13,0:19:18.01:0,18,188	0/0:17,0:15:14.98:0,15,125	0/0:12,0:11:8.99:0,9,81	0/0:23,0:23:17.38:0,17,139	0/0:20,0:20:5.98:0,6,47	0/0:22,0:22:20.97:0,21,195	1/1:22,11:33:23.17:198,23,0	1/1:12,5:18:17.84:162,18,0	./.
chr10	24131105	.	C	CAT	3802.06	PASS	AB=0.826;AC=30;AF=0.536;AN=56;BaseQRankSum=-0.995;DP=545;FS=1.356;HRun=0;HaplotypeScore=88.8735;InbreedingCoeff=0.4146;MQ=64.29;MQ0=19;MQRankSum=2.945;QD=10.56;ReadPosRankSum=1.988;VQSLOD=3.2506;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:24:4.76:174,5,0	1/1:1,3:4:2.84:14,3,0	0/0:24,0:14:38.80:0,39,370	0/0:12,0:9:10.36:0,10,172	0/1:6,29:35:10.38:215,0,10	0/1:14,0:13:18.93:137,0,19	1/1:17,0:17:26.87:287,27,0	1/1:25,0:21:59.29:505,59,0	1/1:2,16:18:11.83:196,12,0	0/0:26,0:25:11.40:0,11,326	0/1:20,0:20:8.39:8,0,185	0/1:4,12:17:9.05:203,0,9	0/1:17,1:15:10.68:253,0,11	0/1:10,0:10:3.74:85,0,4	0/0:17,0:17:45:0,45,469	0/0:12,0:12:35.87:0,36,337	0/1:23,0:23:3.50:4,0,239	0/0:22,0:22:7.56:0,8,221	0/0:21,0:21:46.52:0,47,405	0/0:28,0:27:27.67:0,28,372	0/0:23,0:19:23.41:0,23,251	1/1:9,0:7:18.39:140,18,0	1/1:2,22:25:11.53:336,12,0	1/1:3,15:17:8.52:122,9,0	0/1:5,24:29:28.38:267,0,28	1/1:28,0:27:40.39:417,40,0	1/1:20,0:20:48.99:321,49,0	1/1:5,0:5:14.96:119,15,0
chr10	24131537	.	TAGGA	T	13560.67	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=9.718;DP=653;FS=12.676;HRun=0;HaplotypeScore=138.2683;InbreedingCoeff=0.9951;MQ=55.06;MQ0=3;MQRankSum=-6.750;QD=48.26;ReadPosRankSum=1.690;VQSLOD=5.0923;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,111,2951	1/1:1,17:18:54.18:987,54,0	0/0:25,0:22:63.20:0,63,1470	0/0:35,0:32:93.32:0,93,2350	1/1:1,32:33:87.30:1585,87,0	1/1:2,19:20:57.20:1063,57,0	1/1:3,17:20:20.47:918,20,0	1/1:4,22:26:66.19:1143,66,0	1/1:3,17:20:54.19:1007,54,0	0/0:25,0:25:69.24:0,69,1841	0/0:20,0:20:57.20:0,57,1516	1/1:2,21:23:66.23:1231,66,0	1/1:1,17:18:51.17:951,51,0	1/1:4,24:26:72.21:1260,72,0	0/0:19,0:19:54.19:0,54,1439	0/0:22,0:22:60.21:0,60,1600	0/0:28,0:28:75.26:0,75,2000	0/0:24,0:24:60.21:0,60,1542	0/0:22,0:22:54.19:0,54,1394	0/0:27,0:27:71.60:0,72,1790	0/0:31,0:31:90.31:0,90,2390	1/1:0,19:19:54.18:988,54,0	1/1:1,16:17:45.15:815,45,0	1/1:3,18:21:45.15:830,45,0	1/1:3,14:17:42.14:784,42,0	0/0:23,0:23:60.21:0,60,1601	0/0:26,0:26:78.27:0,78,2076	0/0:5,0:5:12.04:0,12,320
chr10	24131604	.	GA	G	20837.87	PASS	AB=0.520;AC=47;AF=0.839;AN=56;BaseQRankSum=8.467;DP=671;FS=6.239;HRun=3;HaplotypeScore=87.6291;InbreedingCoeff=0.8755;MQ=56.32;MQ0=8;MQRankSum=3.361;QD=36.82;ReadPosRankSum=1.916;VQSLOD=5.2015;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,41:42:99:1545,111,0	1/1:0,14:14:39.05:502,39,0	0/0:26,0:16:45.15:0,45,715	0/0:28,0:18:44.36:0,44,728	1/1:1,18:19:36.12:502,36,0	1/1:0,23:23:48.12:640,48,0	1/1:0,22:22:54.14:733,54,0	1/1:0,16:16:48.12:647,48,0	1/1:0,21:21:57.19:797,57,0	1/1:0,32:32:96.32:1339,96,0	1/1:0,11:11:33.11:462,33,0	1/1:1,22:23:66.21:902,66,0	1/1:0,24:24:72.20:984,72,0	1/1:0,27:27:75.25:1048,75,0	0/0:23,0:23:69.24:0,69,1103	0/0:28,0:28:84.26:0,84,1298	1/1:0,34:34:90.30:1259,90,0	1/1:1,28:29:35.42:1042,35,0	1/1:1,23:22:66.22:920,66,0	1/1:1,25:26:69.19:943,69,0	1/1:0,50:50:99:1930,138,0	1/1:0,14:14:30.10:419,30,0	1/1:0,21:21:51.17:713,51,0	1/1:1,19:20:47.95:655,48,0	1/1:0,13:13:33.02:417,33,0	1/1:0,28:28:84.28:1175,84,0	1/1:0,20:20:60.20:839,60,0	0/1:1,12:13:11.37:425,0,11
chr10	24132397	.	AAT	A	287.90	PASS	AB=1.000;AC=11;AF=0.212;AN=52;BaseQRankSum=4.013;DP=255;FS=4.117;HRun=0;HaplotypeScore=65.3872;InbreedingCoeff=0.2840;MQ=82.92;MQ0=5;MQRankSum=0.190;QD=3.31;ReadPosRankSum=1.465;VQSLOD=1.7023;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:12,6:18:21.06:257,21,0	0/0:3,0:3:8.94:0,9,85	0/1:17,0:9:4.46:4,0,91	0/0:35,0:16:16.06:0,16,85	0/0:9,0:9:19.84:0,20,255	0/0:15,0:15:35.61:0,36,279	0/0:6,0:6:8.68:0,9,82	0/0:27,1:28:26.36:0,26,698	./.	0/1:5,0:5:3.90:4,0,4	1/1:7,0:7:2.91:36,3,0	0/0:4,0:4:8.98:0,9,113	0/0:9,0:9:23.53:0,24,197	0/0:4,0:4:8.89:0,9,58	0/0:2,0:2:6.02:0,6,101	0/0:3,0:3:9.03:0,9,149	0/1:11,0:12:22.70:61,0,23	0/1:9,0:9:11.61:19,0,12	1/1:12,0:12:4.25:35,4,0	0/1:7,0:7:8.09:8,0,19	./.	0/0:4,0:4:3.01:0,3,47	0/0:3,0:3:6.02:0,6,95	0/0:1,0:1:3.01:0,3,46	0/0:13,0:13:31.91:0,32,222	0/0:9,0:9:16.54:0,17,116	0/0:13,0:13:14.96:0,15,80	0/0:5,0:5:7.77:0,8,29
chr10	24132408	.	ATG	A	1124.25	PASS	AB=1.000;AC=17;AF=0.327;AN=52;BaseQRankSum=0.746;DP=251;FS=9.164;HRun=0;HaplotypeScore=66.3260;InbreedingCoeff=0.5017;MQ=81.11;MQ0=6;MQRankSum=0.474;QD=7.86;ReadPosRankSum=-0.953;VQSLOD=1.6981;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:16:29:165,29,0	0/0:4,0:4:7.74:0,8,41	0/0:17,0:8:0.86:0,1,58	0/1:36,0:15:4.08:4,0,38	0/0:13,0:13:13.49:0,13,122	0/0:17,0:17:28.57:0,29,119	0/0:5,0:5:2.83:0,3,23	0/1:26,0:26:67.58:68,0,293	./.	1/1:4,1:5:11.84:96,12,0	1/1:5,3:8:17.97:178,18,0	0/0:3,0:3:8.21:0,8,57	0/0:9,0:9:15.18:0,15,79	0/0:3,0:3:6.96:0,7,24	0/0:2,0:2:6.02:0,6,108	0/0:3,0:3:9.02:0,9,132	1/1:7,6:13:31.82:303,32,0	1/1:1,8:9:8.80:101,9,0	1/1:1,11:12:35.83:330,36,0	1/1:1,4:5:3.01:39,3,0	./.	0/0:1,0:1:2.99:0,3,24	0/0:5,0:4:5.99:0,6,50	0/0:1,0:1:2.99:0,3,24	0/0:14,0:14:19.87:0,20,86	0/0:7,0:7:7.21:0,7,36	0/1:13,0:13:10.70:11,0,11	0/0:4,0:4:2.60:0,3,6
chr10	24132410	.	GTATA	G	3219.44	PASS	AB=1.000;AC=37;AF=0.771;AN=48;BaseQRankSum=0.567;DP=255;FS=1.150;HRun=0;HaplotypeScore=65.5699;InbreedingCoeff=0.2304;MQ=80.73;MQ0=6;MQRankSum=-1.035;QD=14.18;ReadPosRankSum=1.969;VQSLOD=3.0283;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,6:17:15.05:209,15,0	1/1:1,3:4:6.02:102,6,0	0/0:17,0:8:2.80:0,3,14	0/1:37,0:16:4.77:5,0,8	1/1:6,7:13:6.02:102,6,0	1/1:2,15:17:30.10:511,30,0	1/1:2,3:5:3.01:51,3,0	1/1:9,17:26:48.09:657,48,0	./.	1/1:5,0:5:8.92:71,9,0	1/1:8,0:8:6.48:28,6,0	1/1:1,1:2:3.01:51,3,0	1/1:2,7:9:18.06:291,18,0	1/1:0,3:3:9.03:153,9,0	0/0:3,0:3:9.01:0,9,149	0/0:3,0:3:6.02:0,6,145	0/1:13,0:13:12.23:111,0,12	0/1:10,0:10:18.75:39,0,19	0/1:13,0:13:13.14:84,0,13	0/1:6,0:6:8.17:8,0,30	./.	./.	./.	1/1:2,0:2:3:25,3,0	1/1:1,13:14:30.10:510,30,0	1/1:0,0:6:12.02:113,12,0	1/1:2,0:13:17.92:156,18,0	1/1:0,0:4:9.01:84,9,0
chr10	24132425	.	TATAC	T	2423.76	PASS	AB=1.000;AC=33;AF=0.611;AN=54;BaseQRankSum=6.673;DP=232;FS=14.004;HRun=0;HaplotypeScore=64.3424;InbreedingCoeff=0.2205;MQ=74.15;MQ0=4;MQRankSum=-3.473;QD=13.69;ReadPosRankSum=6.989;VQSLOD=1.3442;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:15,0:15:33.71:92,0,34	1/1:3,0:3:6:54,6,0	0/0:11,0:5:3.31:0,3,65	0/0:24,0:10:5.96:0,6,62	0/1:10,0:10:34.20:48,0,34	0/1:17,0:17:11.06:230,0,11	0/1:6,0:6:25.24:25,0,37	0/1:21,0:21:49.96:262,0,50	0/0:3,0:3:5.98:0,6,46	1/1:1,3:4:12.03:165,12,0	1/1:3,7:10:8.98:95,9,0	1/1:1,0:1:3:26,3,0	1/1:7,0:7:17.99:168,18,0	1/1:3,0:3:9:80,9,0	0/0:5,0:5:15:0,15,189	0/0:4,0:4:12.01:0,12,179	1/1:12,1:13:29.80:349,30,0	1/1:10,0:10:9.14:181,9,0	1/1:12,1:13:27.82:350,28,0	1/1:5,0:5:0.72:78,1,0	1/1:1,0:1:2.99:24,3,0	0/0:3,0:3:8.97:0,9,69	./.	0/0:2,0:2:2.47:0,2,22	0/1:15,0:15:11.27:250,0,11	1/1:6,0:6:10.72:53,11,0	0/1:13,0:13:22.86:35,0,23	1/1:4,0:4:7.69:29,8,0
chr10	24132543	.	T	TA	9974.29	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=2.773;DP=369;FS=13.533;HRun=7;HaplotypeScore=56.8608;InbreedingCoeff=0.8972;MQ=81.88;MQ0=0;MQRankSum=-5.561;QD=30.04;ReadPosRankSum=2.494;VQSLOD=4.3035;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,7:7:18.06:217,18,0	1/1:1,8:9:24.07:290,24,0	0/0:13,0:13:23.97:0,24,217	0/0:9,0:9:26.38:0,26,231	1/1:0,11:11:33.10:399,33,0	1/1:2,20:22:57.17:689,57,0	1/1:0,8:8:21.06:254,21,0	1/1:5,23:28:69.16:805,69,0	1/1:3,9:12:1.07:281,1,0	1/1:3,18:21:54.15:638,54,0	1/1:2,11:13:33.10:399,33,0	1/1:1,11:12:27.08:326,27,0	1/1:1,15:16:42.13:507,42,0	1/1:0,7:7:21.06:254,21,0	0/0:9,0:9:24.03:0,24,226	0/0:6,0:6:15.02:0,15,145	1/1:1,7:8:18.06:217,18,0	1/1:2,11:13:32.63:421,33,0	1/1:5,16:21:48.11:564,48,0	1/1:1,17:18:42.06:489,42,0	1/1:0,2:2:6.02:72,6,0	1/1:1,8:9:18.06:217,18,0	1/1:4,11:15:30.09:362,30,0	1/1:0,11:11:30.09:362,30,0	1/1:0,13:13:36.11:435,36,0	1/1:0,20:20:60.18:725,60,0	1/1:2,23:24:37.22:724,37,0	1/1:1,10:11:27.08:326,27,0
chr10	24134355	.	G	GT	3911.51	PASS	AB=0.857;AC=32;AF=0.571;AN=56;BaseQRankSum=-8.469;DP=327;FS=5.640;HRun=9;HaplotypeScore=33.8512;InbreedingCoeff=0.7755;MQ=69.34;MQ0=1;MQRankSum=-0.118;QD=19.56;ReadPosRankSum=0.428;VQSLOD=3.2501;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,13:15:4.03:273,4,0	1/1:1,3:4:9.02:100,9,0	0/0:13,0:9:10:0,10,66	0/1:10,0:3:0.57:1,0,21	1/1:5,22:27:57.15:626,57,0	1/1:2,6:8:9.02:100,9,0	1/1:2,4:6:9.02:100,9,0	1/1:7,20:27:31.04:547,31,0	0/0:3,0:3:9:0,9,78	0/0:7,0:7:20.98:0,21,178	0/0:18,0:18:44.99:0,45,391	1/1:2,5:8:15.03:158,15,0	1/1:1,6:7:15.04:166,15,0	1/1:0,9:8:21.06:232,21,0	0/0:10,0:10:23.98:0,24,208	0/0:5,0:5:14.98:0,15,126	0/0:21,0:21:41.95:0,42,359	0/0:15,0:15:14.46:0,14,253	0/0:19,0:18:41.98:0,42,365	0/0:10,0:10:29.99:0,30,258	0/0:6,0:6:15:0,15,130	0/1:3,2:5:16.65:57,0,17	1/1:2,7:9:18.05:199,18,0	1/1:0,2:2:6.02:66,6,0	1/1:2,10:12:21.06:232,21,0	1/1:5,8:13:3.89:254,4,0	1/1:4,16:20:10.02:327,10,0	1/1:3,15:18:23.32:474,23,0
chr10	24135176	.	TG	T	2732.01	PASS	AB=0.982;AC=20;AF=0.357;AN=56;BaseQRankSum=-7.539;DP=600;FS=3.222;HRun=2;HaplotypeScore=155.4660;InbreedingCoeff=0.0597;MQ=65.02;MQ0=0;MQRankSum=-8.885;QD=7.15;ReadPosRankSum=-3.877;VQSLOD=-0.4657;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:17:47.48:325,47,0	0/0:6,0:6:13.63:0,14,46	0/0:21,0:15:17.70:0,18,408	0/0:17,0:13:16.58:0,17,258	0/1:42,0:42:41.04:41,0,157	0/0:22,0:22:15.45:0,15,105	0/1:8,0:8:10.08:10,0,29	0/1:27,2:29:65.51:105,0,66	0/1:19,1:20:20.48:20,0,90	0/1:38,1:39:97.91:98,0,98	0/0:29,0:29:8.98:0,9,136	0/0:12,0:12:20.04:0,20,66	0/1:25,0:25:47.84:48,0,118	0/1:22,0:22:19.74:20,0,95	0/0:21,0:21:60.20:0,60,890	0/0:18,0:18:46.07:0,46,737	0/0:23,0:23:30.31:0,30,172	0/0:14,0:14:13.04:0,13,85	0/1:23,1:24:50.15:50,0,68	0/1:27,1:28:31.68:32,0,117	0/1:12,0:12:6.39:6,0,45	0/1:19,0:19:31.12:31,0,85	0/1:40,0:40:42.88:43,0,165	0/0:7,0:7:14:0,14,48	0/0:28,0:28:9.51:0,10,104	1/1:4,19:23:69.17:843,69,0	1/1:3,21:24:72.21:896,72,0	1/1:0,10:10:27.09:345,27,0
chr10	24135177	.	GGT	G	908.85	PASS	AB=1.000;AC=12;AF=0.214;AN=56;BaseQRankSum=-2.772;DP=605;FS=3.332;HRun=0;HaplotypeScore=174.8925;InbreedingCoeff=0.3311;MQ=64.92;MQ0=0;MQRankSum=-9.706;QD=4.37;ReadPosRankSum=-3.376;VQSLOD=2.6952;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:5,11:16:48.01:676,48,0	0/0:6,0:6:17.91:0,18,133	0/0:21,0:15:27.42:0,27,596	0/0:17,0:13:23.84:0,24,359	0/0:40,0:41:14.22:0,14,633	0/0:24,0:24:35.85:0,36,414	0/1:8,0:8:6.86:7,0,98	0/0:28,0:29:15.06:0,15,385	0/0:20,0:20:24.34:0,24,346	0/1:39,0:39:26.89:27,0,514	0/0:31,0:31:39.81:0,40,574	0/0:12,0:12:29.82:0,30,216	0/1:24,0:24:35.45:35,0,361	0/1:23,0:23:4.64:5,0,350	0/0:20,0:20:60.21:0,60,1199	0/0:18,0:18:54.07:0,54,1014	0/0:23,0:24:47.84:0,48,510	0/0:14,0:14:21.86:0,22,268	0/0:25,0:25:3.94:0,4,316	0/0:28,0:29:48.84:0,49,517	0/0:12,0:13:8.26:0,8,194	0/0:19,0:19:0.95:0,1,309	0/1:40,0:40:21.10:21,0,576	0/0:7,0:7:18.38:0,18,132	0/0:26,0:27:40.47:0,40,436	1/1:23,0:23:39.45:152,39,0	1/1:24,0:24:38.97:135,39,0	0/1:11,0:11:14.66:15,0,21
chr10	24135198	.	AT	A	12140.80	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=6.328;DP=640;FS=7.167;HRun=9;HaplotypeScore=146.0452;InbreedingCoeff=0.9538;MQ=72.62;MQ0=1;MQRankSum=-5.474;QD=22.82;ReadPosRankSum=4.733;VQSLOD=3.4808;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,11:15:4.28:197,4,0	1/1:0,7:7:18.01:165,18,0	0/0:36,0:26:45.95:0,46,549	0/0:32,1:26:37.91:0,38,414	1/1:5,33:38:96.03:879,96,0	1/1:2,24:26:66.03:604,66,0	1/1:0,8:8:15.01:137,15,0	1/1:1,29:30:84.04:768,84,0	1/1:5,12:17:36:325,36,0	1/1:6,36:42:99:982,108,0	1/1:7,22:29:69.02:632,69,0	1/1:1,14:15:36.02:329,36,0	1/1:4,24:28:66.03:604,66,0	1/1:1,20:21:57.03:521,57,0	0/0:21,0:21:57.17:0,57,658	0/0:17,0:17:48.14:0,48,554	1/1:2,25:27:75.02:679,75,0	1/1:2,13:15:39.02:357,39,0	1/1:5,16:21:48.01:439,48,0	1/1:1,26:27:75.03:685,75,0	1/1:0,17:17:48.03:439,48,0	1/1:3,16:19:41.84:384,42,0	1/1:4,31:35:81.01:735,81,0	1/1:0,10:10:30.02:275,30,0	1/1:1,24:25:60.03:549,60,0	1/1:4,17:21:54.02:494,54,0	1/1:0,28:28:84.05:768,84,0	1/1:3,8:11:21.01:192,21,0
chr10	24135955	.	T	TA	12817.41	PASS	AB=0.638;AC=44;AF=0.815;AN=54;BaseQRankSum=12.557;DP=475;FS=1.588;HRun=0;HaplotypeScore=263.5463;InbreedingCoeff=0.7117;MQ=46.15;MQ0=14;MQRankSum=-11.516;QD=34.83;ReadPosRankSum=4.023;VQSLOD=3.9374;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:7,9:14:95.34:264,0,95	1/1:0,11:11:33.11:449,33,0	0/0:29,0:13:37.94:0,38,507	0/0:19,0:9:26.74:0,27,326	1/1:0,15:15:41.97:505,42,0	1/1:0,22:22:60.20:833,60,0	1/1:2,9:9:27.09:372,27,0	1/1:1,8:8:24.08:332,24,0	1/1:0,7:7:21.07:289,21,0	1/1:0,21:21:60.20:826,60,0	1/1:0,15:15:39.09:509,39,0	1/1:0,18:18:51.17:698,51,0	1/1:0,19:19:57.19:786,57,0	1/1:0,12:12:33.11:462,33,0	0/0:32,0:32:66.22:0,66,923	0/0:25,0:25:66.18:0,66,900	1/1:0,12:11:30.01:356,30,0	0/1:6,8:11:47.04:151,0,47	1/1:0,6:5:12.04:167,12,0	1/1:0,27:27:78.26:1069,78,0	./.	1/1:0,27:26:75.21:998,75,0	1/1:0,21:20:57.19:776,57,0	1/1:2,6:5:3.48:43,3,0	1/1:1,22:23:69.18:921,69,0	1/1:1,16:17:45.15:623,45,0	1/1:1,29:29:87.29:1190,87,0	1/1:2,5:7:14.01:198,14,0
chr10	24136488	.	TA	T	408.94	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.135;DP=444;FS=5.545;HRun=4;HaplotypeScore=52.1779;InbreedingCoeff=0.9692;MQ=70.52;MQ0=0;MQRankSum=-0.688;QD=25.56;ReadPosRankSum=-0.056;VQSLOD=2.1154;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,15:16:42.13:504,42,0	0/0:9,0:9:23.98:0,24,263	0/0:5,0:5:15.05:0,15,190	0/0:8,0:8:19.29:0,19,197	0/0:18,0:18:51.17:0,51,713	0/0:20,0:20:60.18:0,60,816	0/0:8,0:8:24.08:0,24,336	0/0:21,0:21:63.20:0,63,852	0/0:12,0:12:33.11:0,33,462	0/0:19,0:19:51.15:0,51,685	0/0:27,0:27:81.25:0,81,1101	0/0:15,0:15:45.15:0,45,630	0/0:13,0:13:36.12:0,36,504	0/0:15,0:15:42.13:0,42,571	0/0:14,0:14:39.13:0,39,546	0/0:15,0:15:39.13:0,39,546	0/0:22,0:22:64.07:0,64,846	0/0:17,0:17:48.16:0,48,669	0/0:11,0:11:33.10:0,33,446	0/0:34,0:34:99:0,102,1396	0/0:10,0:10:30.10:0,30,420	0/0:11,0:11:33.07:0,33,425	0/0:20,0:20:60.20:0,60,839	0/0:7,0:7:21.07:0,21,294	0/0:14,0:14:39.12:0,39,530	0/0:29,0:29:84.27:0,84,1161	0/0:22,0:22:63.18:0,63,845	0/0:12,0:12:36.11:0,36,487
chr10	24137433	.	TA	T	1835.43	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=4.536;DP=608;FS=4.682;HRun=10;HaplotypeScore=100.0925;InbreedingCoeff=0.9818;MQ=72.71;MQ0=0;MQRankSum=0.840;QD=18.35;ReadPosRankSum=0.890;VQSLOD=3.8739;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,16:19:44.99:391,45,0	0/0:9,0:9:20.64:0,21,130	0/0:30,0:26:39.52:0,40,354	0/0:9,0:7:10.84:0,11,102	0/0:39,0:39:74.11:0,74,596	0/0:21,0:21:56.26:0,56,372	0/0:16,0:16:22.46:0,22,249	0/0:30,0:30:84.98:0,85,507	0/0:28,0:28:69.18:0,69,758	0/0:30,0:30:75.20:0,75,829	0/0:33,0:33:78.10:0,78,835	0/0:15,0:15:22.41:0,22,240	0/0:29,0:29:76.74:0,77,503	0/0:21,0:21:34.41:0,34,331	0/0:20,0:20:45.09:0,45,475	0/0:21,0:21:57.15:0,57,630	0/0:18,0:20:53.81:0,54,556	0/0:14,0:14:35.97:0,36,368	0/0:17,0:17:45.11:0,45,485	0/0:24,0:24:54.15:0,54,597	0/0:13,0:13:36.08:0,36,388	0/0:16,1:17:15.51:0,16,217	0/0:25,0:25:46.71:0,47,407	0/0:12,0:12:32.51:0,33,213	0/0:14,0:14:38.33:0,38,246	1/1:3,27:30:50.80:670,51,0	1/1:5,35:40:77.95:675,78,0	1/1:0,11:11:29.99:260,30,0
chr10	24137740	.	TA	T	8932.61	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=-6.862;DP=618;FS=3.728;HRun=9;HaplotypeScore=98.0835;InbreedingCoeff=0.9956;MQ=79.54;MQ0=0;MQRankSum=-0.504;QD=23.69;ReadPosRankSum=1.531;VQSLOD=5.2128;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,33:36:93.05:851,93,0	1/1:0,14:14:42.02:384,42,0	0/0:15,0:15:24.30:0,24,223	0/0:18,0:18:28.16:0,28,268	1/1:4,28:32:81.04:741,81,0	1/1:1,22:23:63.03:577,63,0	1/1:1,14:15:39.02:357,39,0	1/1:4,38:42:99:1023,114,0	0/0:25,0:25:72.13:0,72,794	0/0:30,0:30:78.23:0,78,900	0/0:32,0:32:93.28:0,93,1071	1/1:3,11:14:33.01:302,33,0	1/1:3,28:31:78.04:714,78,0	1/1:1,16:17:42.02:384,42,0	0/0:23,0:23:55:0,55,716	0/0:20,0:20:57.15:0,57,648	0/0:19,0:19:51.11:0,51,573	0/0:5,0:5:15.04:0,15,173	0/0:15,0:15:42.12:0,42,485	0/0:23,1:24:41.78:0,42,734	0/0:14,0:14:39.10:0,39,441	1/1:1,19:20:53.98:486,54,0	1/1:1,21:22:60.03:549,60,0	1/1:2,16:18:48.03:439,48,0	1/1:2,34:36:93.05:851,93,0	1/1:3,16:19:16.38:395,16,0	1/1:1,25:26:65.93:604,66,0	1/1:2,10:12:30:275,30,0
chr10	24137768	.	GATA	G	7174.21	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-8.868;DP=641;FS=8.135;HRun=0;HaplotypeScore=127.4109;InbreedingCoeff=0.9888;MQ=86.62;MQ0=0;MQRankSum=-5.336;QD=41.71;ReadPosRankSum=1.415;VQSLOD=6.1852;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:90.17:0,90,1866	0/0:17,0:17:48.16:0,48,1056	0/0:29,0:29:56.83:0,57,1472	0/0:18,0:17:22.50:0,23,692	0/0:28,0:28:78.23:0,78,1597	0/0:25,0:25:72.24:0,72,1513	0/0:12,0:12:30.10:0,30,658	0/0:36,0:36:87.28:0,87,1841	1/1:2,27:29:72.25:1157,72,0	1/1:1,29:30:84.25:1296,84,0	1/1:0,38:38:99:1610,102,0	0/0:14,0:14:36.12:0,36,772	0/0:25,0:25:69.21:0,69,1439	0/0:16,0:16:39.12:0,39,818	0/0:22,0:22:57.20:0,57,1258	0/0:27,1:28:27.10:0,27,1523	1/1:1,18:19:51.17:819,51,0	1/1:2,4:6:12.04:193,12,0	1/1:1,11:12:36.12:557,36,0	1/1:1,21:22:60.20:963,60,0	1/1:2,14:16:36.12:578,36,0	0/0:23,0:23:66.23:0,66,1449	0/0:27,0:27:81.28:0,81,1786	0/0:18,0:18:51.18:0,51,1123	0/0:34,0:34:93.30:0,93,1972	0/0:20,1:21:11.97:0,12,1170	0/0:26,0:26:69.24:0,69,1500	0/0:15,0:15:45.15:0,45,993
chr10	24138604	.	G	GAA	6128.40	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-12.160;DP=512;FS=10.314;HRun=10;HaplotypeScore=81.2201;InbreedingCoeff=0.9490;MQ=75.04;MQ0=1;MQRankSum=-0.888;QD=29.32;ReadPosRankSum=-2.574;VQSLOD=3.5884;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,0:10:20.80:199,21,0	1/1:2,9:12:21.06:297,21,0	0/0:19,0:20:1.03:0,1,224	0/0:14,0:13:6.72:0,7,183	1/1:4,22:29:69.18:952,69,0	1/1:0,15:19:50.14:672,50,0	1/1:3,6:10:16.27:231,16,0	1/1:5,15:23:53.59:697,54,0	0/0:5,0:25:52.05:0,52,224	0/0:9,0:31:68.74:0,69,330	0/0:4,0:24:52.11:0,52,225	1/1:4,7:11:21.05:292,21,0	1/1:4,13:18:39.13:565,39,0	1/1:3,17:20:33.11:494,33,0	0/0:17,0:17:39.04:0,39,397	0/0:17,0:19:29.38:0,29,317	0/0:2,0:14:30.11:0,30,130	0/0:2,0:11:19.20:0,19,83	0/0:4,0:16:32.92:0,33,142	0/0:3,0:28:60.36:0,60,261	0/0:2,0:18:38.42:0,38,166	1/1:4,14:19:41.58:565,42,0	1/1:1,14:14:30.57:448,31,0	1/1:1,6:7:15.05:224,15,0	1/1:2,14:16:33.11:492,33,0	0/0:19,0:19:47.80:0,48,465	0/0:34,0:35:83.83:0,84,886	0/0:10,0:10:30.07:0,30,305
chr10	24138832	.	GA	G	5353.55	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=1.958;DP=427;FS=75.983;HRun=9;HaplotypeScore=106.1919;InbreedingCoeff=0.9714;MQ=74.89;MQ0=0;MQRankSum=2.789;QD=24.33;ReadPosRankSum=3.358;VQSLOD=-0.6668;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,6:8:18.01:165,18,0	0/0:3,0:3:9.03:0,9,104	0/0:11,0:11:21.04:0,21,215	0/0:13,0:13:7.78:0,8,171	0/0:23,0:22:51.11:0,51,573	0/0:21,0:21:60.10:0,60,663	0/0:8,0:8:21.06:0,21,241	0/0:29,0:29:80.86:0,81,840	1/1:0,13:13:36.02:329,36,0	1/1:1,24:25:75.03:682,75,0	1/1:0,24:24:63.02:576,63,0	0/0:11,0:11:27.08:0,27,310	0/0:9,0:9:26.98:0,27,276	0/0:11,0:11:27.08:0,27,311	0/0:22,0:22:63.19:0,63,727	0/0:6,0:6:18.05:0,18,208	1/1:1,8:9:18.01:165,18,0	1/1:0,8:8:21.01:192,21,0	1/1:1,18:19:49:487,49,0	1/1:3,32:35:96:869,96,0	1/1:1,12:13:36.02:329,36,0	0/0:7,0:7:18.05:0,18,208	0/0:10,0:10:30:0,30,315	0/0:9,0:9:18.05:0,18,204	0/0:14,0:14:35.97:0,36,394	1/1:2,20:22:59.98:538,60,0	1/1:7,31:38:98.91:884,99,0	1/1:3,3:6:15.01:137,15,0
chr10	24138875	.	TTTCTAGATCCAAAAGAAAAAAGA	T	20121.78	PASS	AB=0.571;AC=31;AF=0.554;AN=56;BaseQRankSum=13.654;DP=331;FS=7.535;HRun=0;HaplotypeScore=221.4346;InbreedingCoeff=0.8384;MQ=74.97;MQ0=0;MQRankSum=-12.581;QD=154.78;ReadPosRankSum=4.934;VQSLOD=3.7089;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,5:6:12.04:685,12,0	1/1:0,3:3:9.03:587,9,0	0/0:10,0:10:30.10:0,30,1808	0/0:14,0:14:39.13:0,39,2763	1/1:0,13:12:24.08:1320,24,0	1/1:0,15:15:42.14:2739,42,0	1/1:0,1:1:3.01:196,3,0	1/1:0,10:10:30.05:1365,30,0	0/0:14,0:14:39.12:0,39,3288	0/0:25,0:25:75.26:0,75,7277	0/0:34,0:34:99:0,102,10039	1/1:0,5:5:12.04:782,12,0	1/1:0,9:9:24.08:1539,24,0	1/1:0,3:3:9.03:543,9,0	0/0:18,0:18:54.19:0,54,4804	0/0:7,0:7:21.07:0,21,1840	0/0:14,0:14:36.12:0,36,3550	0/0:8,0:8:24.08:0,24,2027	0/0:15,0:15:45.09:0,45,3283	0/0:30,0:30:90.31:0,90,8482	0/0:12,0:12:36.11:0,36,2371	1/1:0,6:6:18.06:1012,18,0	1/1:0,10:10:26.84:1759,27,0	1/1:0,6:6:3.01:196,3,0	1/1:0,9:9:21.07:1369,21,0	0/1:3,9:12:99:1832,0,204	1/1:0,20:20:60.21:3886,60,0	1/1:0,2:2:6.02:312,6,0
chr10	24138979	.	CATATATATATATATATATATATATATATATATATAT	C	2892	PASS	AB=0.808;AC=18;AF=0.563;AN=32;BaseQRankSum=4.089;DP=228;FS=4.837;HRun=0;HaplotypeScore=186.7832;InbreedingCoeff=0.1588;MQ=52.79;MQ0=8;MQRankSum=-3.382;QD=32.86;ReadPosRankSum=4.019;VQSLOD=2.4618;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	1/1:3,0:4:3.90:132,4,0	./.	0/0:23,0:11:18.05:0,18,445	0/1:6,0:8:99:160,0,134	0/1:9,0:10:78.98:79,0,170	./.	0/0:17,0:17:24.07:0,24,661	./.	0/0:18,0:18:2.24:0,2,5	./.	0/1:1,0:2:84.22:84,0,91	0/1:5,0:5:71.09:124,0,71	1/1:3,0:4:3.01:90,3,0	./.	./.	./.	./.	0/0:8,0:8:1.81:0,2,5	0/0:21,0:21:0.47:0,0,1	./.	1/1:2,0:4:5.89:101,6,0	./.	./.	1/1:5,0:7:6.02:221,6,0	1/1:14,2:16:9.03:646,9,0	1/1:12,8:20:11.05:1097,11,0	1/1:6,1:7:3.01:275,3,0
chr10	24138990	.	A	AG	159.83	PASS	AC=12;AF=0.316;AN=38;BaseQRankSum=-0.679;DP=134;FS=3.023;HRun=0;HaplotypeScore=51.4458;InbreedingCoeff=0.5734;MQ=50.92;MQ0=8;MQRankSum=3.282;QD=9.99;ReadPosRankSum=-3.646;VQSLOD=2.7409;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/0:4,0:4:2.02:0,2,9	./.	0/0:23,0:11:16.48:0,16,151	0/0:6,0:6:8.48:0,8,71	0/0:9,0:9:11.62:0,12,121	./.	0/0:11,0:11:33.05:0,33,392	./.	1/1:1,2:3:9.03:109,9,0	1/1:3,0:3:5.98:47,6,0	0/0:2,0:2:5.61:0,6,51	0/0:4,0:3:5.49:0,5,34	0/0:2,0:2:2.60:0,3,10	0/0:2,0:2:3.01:0,3,40	./.	1/1:3,0:2:3:25,3,0	./.	1/1:0,2:2:6.01:62,6,0	1/1:0,3:3:3.01:39,3,0	./.	1/1:2,0:2:1.55:4,2,0	./.	./.	0/0:6,0:6:5.09:0,5,19	0/0:15,0:15:28.81:0,29,327	0/0:17,0:17:15.46:0,15,92	0/0:6,0:6:8.37:0,8,72
chr10	24139663	.	TTA	T	5098.59	PASS	AC=16;AF=0.296;AN=54;BaseQRankSum=14.540;DP=417;FS=7.415;HRun=0;HaplotypeScore=61.2529;InbreedingCoeff=0.9298;MQ=66.68;MQ0=0;MQRankSum=-0.564;QD=30.53;ReadPosRankSum=2.660;VQSLOD=6.2918;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:10:30.08:0,30,456	0/0:4,0:4:12.04:0,12,204	0/0:6,0:5:11.77:0,12,110	0/0:12,0:7:5.99:0,6,67	0/0:32,0:32:84.27:0,84,1391	0/0:23,0:23:63.22:0,63,1069	0/0:7,0:7:12.04:0,12,196	0/0:28,0:28:66.22:0,66,1071	1/1:2,11:13:24.08:312,24,0	1/1:4,25:29:75.23:960,75,0	1/1:1,20:21:51.04:606,51,0	0/0:10,0:10:30.10:0,30,510	0/0:13,0:13:36.12:0,36,600	0/0:9,0:9:21.07:0,21,343	0/0:12,0:12:36.12:0,36,612	0/0:7,0:7:18.06:0,18,306	1/1:1,25:26:66.17:839,66,0	1/1:3,21:24:54.18:702,54,0	1/1:1,13:14:39.13:507,39,0	1/1:4,27:31:72.15:898,72,0	1/1:1,8:9:21.07:273,21,0	./.	0/0:6,0:6:15.05:0,15,241	0/0:2,0:2:3.01:0,3,51	0/0:13,0:13:36.12:0,36,607	0/0:20,1:21:15.16:0,15,829	0/0:20,0:20:54.18:0,54,918	0/0:14,0:14:36.12:0,36,612
chr10	24139789	.	T	TAACA	11884.69	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-12.345;DP=494;FS=0.000;HRun=0;HaplotypeScore=72.0686;InbreedingCoeff=0.9880;MQ=72.85;MQ0=0;MQRankSum=-2.320;QD=62.88;ReadPosRankSum=-0.337;VQSLOD=6.3009;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:75.26:0,75,1400	1/1:0,7:7:18.06:480,18,0	0/0:6,0:6:15.05:0,15,279	0/0:12,0:12:27.06:0,27,448	1/1:3,19:22:57.07:1301,57,0	1/1:2,17:20:57.15:1437,57,0	1/1:0,3:3:9.03:240,9,0	1/1:6,18:24:69.24:1778,69,0	0/0:16,0:16:33.10:0,33,585	0/0:26,0:26:72.21:0,72,1308	0/0:27,0:27:75.24:0,75,1369	1/1:2,10:12:33.11:853,33,0	1/1:3,13:17:39.13:1040,39,0	1/1:2,17:19:45.15:1172,45,0	0/0:13,0:12:39.13:0,39,728	0/0:11,0:11:30.10:0,30,560	0/0:12,0:12:36.12:0,36,667	0/0:15,0:15:42.14:0,42,778	0/0:28,0:28:69.24:0,69,1279	0/0:25,0:25:75.23:0,75,1331	0/0:24,0:24:66.23:0,66,1232	1/1:2,8:11:27.09:718,27,0	1/1:4,12:16:36.04:811,36,0	1/1:1,16:17:36.12:960,36,0	1/1:2,19:21:42.14:1094,42,0	0/0:24,0:24:72.25:0,72,1336	0/0:19,0:19:57.20:0,57,1057	0/0:20,0:20:57.15:0,57,987
chr10	24141376	.	AT	A	1922.76	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=7.999;DP=597;FS=0.000;HRun=5;HaplotypeScore=59.5604;InbreedingCoeff=0.9961;MQ=74.38;MQ0=0;MQRankSum=1.208;QD=29.13;ReadPosRankSum=1.507;VQSLOD=3.9815;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,1:35:63.01:0,63,1219	0/0:9,0:9:18.05:0,18,230	0/0:16,0:15:29.64:0,30,360	0/0:19,0:20:43.93:0,44,470	0/0:34,0:34:99:0,102,1342	0/0:19,0:19:57.18:0,57,763	0/0:18,0:18:54.11:0,54,685	0/0:18,0:18:51.15:0,51,669	0/0:15,0:15:39.13:0,39,533	0/0:27,0:27:78.26:0,78,1067	0/0:21,0:21:57.15:0,57,756	0/0:19,0:19:57.19:0,57,779	0/0:17,0:17:48.16:0,48,656	0/0:22,0:22:63.21:0,63,861	0/0:20,0:20:60.19:0,60,805	0/0:11,0:11:33.10:0,33,435	0/0:26,0:26:75.24:0,75,1010	0/0:20,0:20:57.12:0,57,738	0/0:23,0:23:63.16:0,63,825	0/0:24,0:24:63.15:0,63,823	0/0:16,0:16:45.10:0,45,565	0/0:27,0:27:78.25:0,78,1053	0/0:31,0:31:84.27:0,84,1131	0/0:18,0:18:54.18:0,54,738	0/0:25,0:25:72.24:0,72,985	1/1:1,24:25:72.19:806,72,0	1/1:0,33:33:87.25:987,87,0	1/1:0,8:8:24.07:272,24,0
chr10	24141665	.	GGAGA	G	9348.52	PASS	AB=0.986;AC=39;AF=0.696;AN=56;BaseQRankSum=-4.900;DP=617;FS=29.054;HRun=0;HaplotypeScore=161.1624;InbreedingCoeff=0.2112;MQ=62.34;MQ0=2;MQRankSum=-4.013;QD=17.64;ReadPosRankSum=4.506;VQSLOD=2.9650;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:20,3:23:53.86:587,54,0	1/1:4,6:10:18.31:176,18,0	0/0:22,0:17:46.50:0,46,458	0/0:23,0:18:37.70:0,38,394	0/1:27,0:27:99:275,0,102	0/1:22,0:22:49.17:317,0,49	1/1:16,0:16:3.19:327,3,0	1/1:27,0:27:57.08:540,57,0	1/1:6,19:25:17.92:241,18,0	1/1:24,2:26:46.40:565,46,0	1/1:17,3:20:25.76:419,26,0	0/1:20,0:20:99:312,0,112	0/1:40,0:40:99:483,0,256	0/1:26,0:26:99:284,0,187	0/0:17,0:17:42.06:0,42,656	0/0:25,0:25:41.98:0,42,628	1/1:21,0:21:42.46:401,42,0	1/1:14,0:14:30.51:236,31,0	1/1:21,0:21:41.01:465,41,0	1/1:6,20:26:45.28:565,45,0	1/1:10,0:10:17.88:156,18,0	0/1:19,1:20:32.96:393,0,33	0/1:21,0:20:99:311,0,114	0/1:26,1:27:67.18:564,0,67	0/1:21,1:22:99:344,0,130	1/1:3,25:28:68.79:830,69,0	1/1:4,26:30:29.31:496,29,0	1/1:8,0:8:9.06:60,9,0
chr10	24141787	.	CA	C	1108.89	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.658;DP=554;FS=3.335;HRun=2;HaplotypeScore=124.8580;InbreedingCoeff=0.9970;MQ=74.91;MQ0=0;MQRankSum=-1.693;QD=32.61;ReadPosRankSum=0.685;VQSLOD=3.1950;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,34:34:93.30:1204,93,0	0/0:9,0:9:27.09:0,27,403	0/0:20,0:21:51.12:0,51,696	0/0:19,0:19:57.18:0,57,824	0/0:29,0:29:84.28:0,84,1239	0/0:22,0:22:66.21:0,66,968	0/0:13,0:13:36.12:0,36,539	0/0:37,0:37:99:0,105,1555	0/0:14,0:14:39.09:0,39,557	0/0:19,0:19:50.87:0,51,762	0/0:18,0:18:45.04:0,45,568	0/0:24,0:23:69.23:0,69,1033	0/0:24,0:24:72.23:0,72,1059	0/0:25,0:25:75.25:0,75,1124	0/0:15,0:15:45.15:0,45,674	0/0:17,0:17:51.17:0,51,764	0/0:14,0:14:39.13:0,39,583	0/0:13,0:13:39.13:0,39,581	0/0:23,0:23:69.23:0,69,1034	0/0:9,0:9:27.09:0,27,404	0/0:20,0:19:48.16:0,48,718	0/0:29,0:29:87.29:0,87,1296	0/0:11,0:11:33.11:0,33,494	0/0:20,0:20:60.20:0,60,899	0/0:13,0:13:39.13:0,39,584	0/0:22,0:22:60.20:0,60,880	0/0:29,0:28:81.25:0,81,1167	0/0:11,0:11:33.07:0,33,424
chr10	24142435	.	CA	C	389.20	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=1.570;DP=286;FS=6.181;HRun=4;HaplotypeScore=50.2115;InbreedingCoeff=0.6589;MQ=83.35;MQ0=0;MQRankSum=-0.948;QD=24.32;ReadPosRankSum=0.383;VQSLOD=2.2086;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,16:16:42.06:484,42,0	0/0:5,0:5:11.60:0,12,168	0/0:10,0:8:24.08:0,24,327	0/0:15,0:16:42.12:0,42,547	0/0:14,0:14:36.12:0,36,496	0/0:11,0:11:21.07:0,21,294	0/0:9,0:9:27.09:0,27,378	0/0:21,0:21:57.18:0,57,783	0/0:5,0:5:15.05:0,15,210	0/0:13,0:13:39.13:0,39,545	0/0:3,0:3:9.03:0,9,126	0/0:7,0:7:15.05:0,15,209	0/0:3,0:3:9.03:0,9,126	0/0:11,0:11:24.07:0,24,318	0/0:6,0:6:15.04:0,15,193	0/0:3,0:3:6.02:0,6,84	0/0:21,0:21:63.20:0,63,864	0/0:4,0:4:9.03:0,9,126	0/0:13,0:13:36.11:0,36,483	0/0:6,0:6:18.06:0,18,252	0/0:3,0:3:9.03:0,9,126	0/0:6,0:6:15.05:0,15,210	0/0:4,0:4:12.04:0,12,167	0/0:5,0:5:15.05:0,15,210	0/0:26,0:26:72.24:0,72,994	0/0:10,0:10:30.10:0,30,414	0/0:15,0:15:39.12:0,39,529	0/0:20,0:20:60.20:0,60,840
chr10	24148082	.	T	TA	1475.79	PASS	AB=0.780;AC=28;AF=0.500;AN=56;BaseQRankSum=-4.163;DP=213;FS=8.397;HRun=13;HaplotypeScore=36.9646;InbreedingCoeff=0.5531;MQ=62.24;MQ0=4;MQRankSum=2.457;QD=12.95;ReadPosRankSum=0.247;VQSLOD=3.0403;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:2,0:13:18.46:0,18,60	1/1:0,2:2:6.01:56,6,0	0/1:10,0:5:14.32:14,0,32	0/0:8,0:5:2.87:0,3,20	1/1:2,10:11:32.87:293,33,0	1/1:2,8:9:21.02:195,21,0	1/1:1,1:1:3:28,3,0	1/1:4,5:9:18.01:164,18,0	0/0:1,0:8:12.21:0,12,36	0/0:8,0:14:12.91:0,13,39	0/0:2,0:5:8.13:0,8,23	0/1:4,5:9:17.14:142,0,17	1/1:0,1:1:3:28,3,0	0/1:5,2:7:10.02:49,0,10	0/0:7,0:7:14.87:0,15,103	0/0:5,0:5:14.88:0,15,103	0/0:2,0:8:7.95:0,8,23	0/0:0,0:3:2.04:0,2,6	0/0:2,0:5:8.15:0,8,23	0/0:5,0:14:16.23:0,16,47	0/0:0,0:5:8.15:0,8,24	1/1:1,3:4:9.01:83,9,0	0/1:4,3:7:8.24:72,0,8	1/1:0,4:4:12.01:111,12,0	1/1:1,7:9:20.86:181,21,0	1/1:10,0:10:15.32:77,15,0	1/1:9,0:9:21.86:95,22,0	1/1:6,0:7:19.14:84,19,0
chr10	24148094	.	A	AAC	897.93	PASS	AB=0.889;AC=7;AF=0.125;AN=56;BaseQRankSum=-3.921;DP=222;FS=1.357;HRun=0;HaplotypeScore=43.8713;InbreedingCoeff=0.5556;MQ=73.54;MQ0=5;MQRankSum=-0.294;QD=20.41;ReadPosRankSum=-0.037;VQSLOD=3.5680;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:15:38.79:0,39,285	0/0:2,0:2:5.60:0,6,26	0/1:14,0:10:44:44,0,114	0/0:11,0:6:2.07:0,2,111	0/0:13,0:12:20.05:0,20,145	0/0:9,0:9:22.53:0,23,119	0/0:3,0:2:2.80:0,3,13	0/0:13,0:13:37.64:0,38,255	0/0:7,0:7:17.90:0,18,131	0/0:10,0:10:29.78:0,30,215	0/0:5,0:5:11.93:0,12,87	0/0:9,0:9:22.98:0,23,165	0/0:1,0:1:2.80:0,3,13	0/0:7,0:7:11.61:0,12,100	0/0:8,0:8:21:0,21,250	0/0:5,0:5:15.05:0,15,197	0/0:9,0:9:20.79:0,21,144	0/0:3,0:3:2.98:0,3,22	0/0:6,0:5:14.93:0,15,114	0/0:10,0:10:26.83:0,27,195	0/0:6,0:6:14.90:0,15,107	0/0:4,0:4:11.28:0,11,65	0/0:6,0:6:11.40:0,11,79	0/0:6,0:6:16.95:0,17,94	0/0:9,0:9:9.79:0,10,93	1/1:6,5:11:5.34:299,5,0	1/1:1,9:10:24.08:379,24,0	1/1:1,5:7:21.07:313,21,0
chr10	24148186	.	A	AT	143.30	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.970;DP=315;FS=6.820;HRun=0;HaplotypeScore=73.9018;InbreedingCoeff=0.6697;MQ=75.62;MQ0=1;MQRankSum=0.242;QD=10.24;ReadPosRankSum=-0.288;VQSLOD=3.1725;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,10:14:32.49:238,32,0	0/0:2,0:2:6.02:0,6,84	0/0:39,0:19:28.37:0,28,332	0/0:21,0:13:21.93:0,22,206	0/0:13,0:13:39.13:0,39,543	0/0:16,0:16:48.03:0,48,561	0/0:9,0:9:27.01:0,27,318	0/0:18,0:17:48.12:0,48,606	0/0:4,0:4:11.58:0,12,75	0/0:3,0:3:4.67:0,5,27	0/0:7,0:7:13.90:0,14,62	0/0:4,0:4:12.04:0,12,167	0/0:8,0:8:22.63:0,23,297	0/0:19,0:19:51.16:0,51,694	0/0:15,0:15:39.10:0,39,484	0/0:12,0:12:36.09:0,36,457	0/0:13,0:13:27.52:0,28,141	0/0:9,0:9:14.49:0,14,86	0/0:10,0:10:25.29:0,25,128	0/0:9,0:9:19.93:0,20,113	0/0:6,0:6:10.45:0,10,65	0/0:9,0:9:24.08:0,24,334	0/0:8,0:8:24.07:0,24,318	0/0:11,0:11:33.09:0,33,428	0/0:7,0:7:21.06:0,21,265	0/0:14,0:14:40.31:0,40,250	0/0:10,0:9:26.38:0,26,138	0/0:4,0:5:8.29:0,8,36
chr10	24148188	.	A	AAAT	4430.27	PASS	AB=1.000;AC=25;AF=0.446;AN=56;BaseQRankSum=9.904;DP=319;FS=3.251;HRun=0;HaplotypeScore=72.7284;InbreedingCoeff=0.8943;MQ=73.96;MQ0=1;MQRankSum=-6.613;QD=34.08;ReadPosRankSum=-1.489;VQSLOD=4.9413;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,0:15:36.12:725,36,0	0/0:2,0:2:6.02:0,6,99	0/0:39,0:20:22.41:0,22,331	0/1:19,0:11:1.50:1,0,164	0/0:13,0:13:39.13:0,39,643	0/0:15,0:15:45.05:0,45,621	0/0:8,0:8:24.01:0,24,319	0/0:17,0:16:45.11:0,45,631	1/1:2,2:4:11.94:178,12,0	1/1:5,1:6:2.96:150,3,0	1/1:0,7:7:17.98:331,18,0	0/0:4,0:4:12.04:0,12,199	0/0:8,0:8:21.96:0,22,351	0/0:18,0:18:54.17:0,54,847	0/0:15,0:15:36.08:0,36,516	0/0:14,0:14:36.10:0,36,530	1/1:6,7:13:23.94:549,24,0	1/1:6,3:9:14.90:253,15,0	1/1:3,5:10:27.03:488,27,0	1/1:3,4:9:27.05:421,27,0	1/1:3,3:6:17.97:242,18,0	0/0:9,0:9:27.08:0,27,411	0/0:7,0:7:21.07:0,21,348	0/0:11,0:11:33.09:0,33,500	0/0:8,0:8:24.05:0,24,327	1/1:8,1:14:42.02:528,42,0	1/1:4,2:10:29.92:422,30,0	1/1:4,0:6:9.03:142,9,0
chr10	24148210	.	C	CA	3159.86	PASS	AB=1.000;AC=25;AF=0.446;AN=56;BaseQRankSum=10.690;DP=355;FS=1.016;HRun=7;HaplotypeScore=80.1446;InbreedingCoeff=0.9027;MQ=70.90;MQ0=0;MQRankSum=-6.845;QD=19.75;ReadPosRankSum=0.067;VQSLOD=3.1557;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,16:19:36.11:435,36,0	0/0:3,0:3:9.01:0,9,87	0/0:39,0:22:24.29:0,24,353	0/1:24,0:14:18.66:19,0,124	0/0:12,0:12:30.04:0,30,290	0/0:21,0:21:63.10:0,63,608	0/0:9,0:9:21.03:0,21,202	0/0:21,0:21:54.09:0,54,521	1/1:2,4:6:12.04:145,12,0	1/1:1,6:7:15.05:181,15,0	1/1:2,10:12:30.01:321,30,0	0/0:6,0:6:18.03:0,18,174	0/0:8,0:8:18.02:0,18,174	0/0:17,0:17:48.07:0,48,463	0/0:9,0:9:24.02:0,24,226	0/0:12,0:12:36.06:0,36,347	1/1:6,8:14:21.06:253,21,0	1/1:0,11:11:18.04:205,18,0	1/1:7,7:12:24.01:272,24,0	1/1:2,6:8:24.06:277,24,0	1/1:1,7:8:18.05:215,18,0	0/0:5,0:5:15.02:0,15,145	0/0:8,0:8:21.02:0,21,197	0/0:14,0:14:39.01:0,39,367	0/0:11,0:11:30.04:0,30,289	1/1:3,15:18:45.14:543,45,0	1/1:4,6:9:30.07:336,30,0	1/1:2,7:9:16.29:184,16,0
chr10	24148273	.	A	AT	4799.49	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=4.061;DP=423;FS=30.911;HRun=0;HaplotypeScore=94.8647;InbreedingCoeff=0.9764;MQ=78.57;MQ0=0;MQRankSum=-1.652;QD=13.26;ReadPosRankSum=2.823;VQSLOD=3.3800;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:18:27.98:179,28,0	1/1:4,0:4:11.47:58,11,0	0/0:22,0:20:59.42:0,59,683	0/0:13,0:11:23.14:0,23,334	1/1:15,0:15:37.56:237,38,0	1/1:24,0:23:56.01:273,56,0	1/1:13,0:13:33.45:234,33,0	1/1:19,0:19:55.21:352,55,0	1/1:12,1:13:32.99:210,33,0	1/1:16,0:16:41.01:254,41,0	1/1:15,0:15:20.51:132,21,0	1/1:14,0:14:25.14:148,25,0	1/1:15,0:15:38.11:220,38,0	1/1:17,0:17:43.02:223,43,0	0/0:12,0:12:36.08:0,36,467	0/0:14,0:14:42.14:0,42,586	1/1:13,0:13:20.86:93,21,0	1/1:15,1:16:31.45:170,31,0	1/1:18,0:17:24.74:174,25,0	1/1:8,0:8:22.89:150,23,0	1/1:14,0:14:20.17:115,20,0	1/1:10,0:10:28.64:152,29,0	1/1:8,0:8:17.17:94,17,0	1/1:14,0:14:34.82:177,35,0	1/1:21,0:21:57.66:336,58,0	1/1:27,1:28:69.78:492,70,0	1/1:21,1:21:49.72:258,50,0	1/1:7,0:7:15.03:64,15,0
chr10	24148358	.	G	GAAA	4509.23	PASS	AB=0.792;AC=24;AF=0.429;AN=56;BaseQRankSum=1.721;DP=393;FS=1.430;HRun=10;HaplotypeScore=71.9217;InbreedingCoeff=0.8159;MQ=72.17;MQ0=0;MQRankSum=-3.387;QD=24.91;ReadPosRankSum=-1.912;VQSLOD=3.1309;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,0:13:18.83:140,19,0	0/0:5,0:5:12.02:0,12,134	0/1:10,0:10:16.80:17,0,66	0/0:4,0:4:2.99:0,3,36	0/0:26,0:26:65.95:0,66,753	0/0:23,0:24:69.09:0,69,802	0/0:8,0:8:18.05:0,18,219	0/0:25,0:26:57.03:0,57,645	1/1:2,5:7:15.05:275,15,0	1/1:9,9:18:42.12:683,42,0	1/1:3,10:17:45.05:672,45,0	0/0:7,0:7:15.03:0,15,182	0/0:9,0:10:20.94:0,21,237	0/0:20,0:20:51.09:0,51,603	0/0:16,0:18:32.71:0,33,407	0/0:10,0:11:25.42:0,25,326	1/1:4,11:15:27.09:501,27,0	1/1:3,3:6:12.04:198,12,0	0/1:4,8:14:6.45:370,0,6	1/1:4,13:18:39.06:602,39,0	1/1:5,4:9:8.99:135,9,0	0/0:13,0:13:33.06:0,33,401	0/0:13,0:13:33.08:0,33,401	0/0:15,0:15:39.08:0,39,474	0/0:12,0:12:33.08:0,33,401	1/1:11,1:22:43.05:354,43,0	1/1:12,1:20:11.37:372,11,0	1/1:1,0:12:26.40:188,26,0
chr10	24148541	.	AT	A	313.45	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.159;DP=445;FS=0.000;HRun=5;HaplotypeScore=46.6110;InbreedingCoeff=0.9230;MQ=74.04;MQ0=0;MQRankSum=-1.798;QD=20.90;ReadPosRankSum=-0.316;VQSLOD=2.5345;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,15:15:36.10:408,36,0	0/0:6,0:6:18.06:0,18,246	0/0:7,0:7:21.06:0,21,272	0/0:10,0:10:24.06:0,24,296	0/0:29,0:29:87.22:0,87,1136	0/0:21,0:21:57.19:0,57,779	0/0:11,0:11:30.10:0,30,409	0/0:24,0:24:66.21:0,66,889	0/0:18,0:18:45.15:0,45,612	0/0:18,0:18:51.17:0,51,696	0/0:22,0:22:60.19:0,60,803	0/0:11,0:11:33.11:0,33,451	0/0:22,0:22:66.22:0,66,901	0/0:23,0:23:69.23:0,69,940	0/0:24,0:24:66.21:0,66,886	0/0:12,0:12:36.12:0,36,493	0/0:19,0:19:54.15:0,54,718	0/0:15,0:15:42.14:0,42,574	0/0:24,0:24:63.21:0,63,859	0/0:21,0:21:57.18:0,57,763	0/0:12,0:12:36.10:0,36,475	0/0:7,0:7:21.07:0,21,287	0/0:7,0:7:21.07:0,21,287	0/0:3,0:3:9.03:0,9,123	0/0:18,0:18:54.18:0,54,739	0/0:19,0:19:57.19:0,57,778	0/0:19,0:19:51.16:0,51,682	0/0:8,0:8:24.08:0,24,328
chr10	24148943	.	GT	G	1260.30	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=5.441;DP=381;FS=7.876;HRun=2;HaplotypeScore=53.6021;InbreedingCoeff=0.9688;MQ=75.11;MQ0=0;MQRankSum=-3.472;QD=33.17;ReadPosRankSum=1.631;VQSLOD=3.2506;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:27.05:0,27,379	0/0:5,0:5:15.05:0,15,223	0/0:9,0:9:21.78:0,22,319	0/0:7,0:7:16.08:0,16,254	0/0:22,0:22:66.21:0,66,969	0/0:14,0:14:42.13:0,42,608	0/0:7,0:7:21.07:0,21,315	0/0:19,0:19:57.17:0,57,803	0/0:9,0:9:27.09:0,27,399	0/0:25,0:25:72.23:0,72,1047	0/0:21,0:21:63.20:0,63,924	0/0:8,0:8:18.06:0,18,270	0/0:18,0:18:51.17:0,51,764	0/0:13,0:13:30.10:0,30,448	0/0:19,0:19:57.16:0,57,811	0/0:13,0:13:39.13:0,39,585	0/0:9,0:9:21.02:0,21,288	0/0:16,0:16:45.14:0,45,656	0/0:12,0:12:33.09:0,33,457	0/0:21,0:21:63.20:0,63,926	0/0:13,0:13:27.09:0,27,405	0/0:9,0:9:27.09:0,27,405	0/0:18,0:18:51.15:0,51,739	0/0:7,0:7:21.05:0,21,278	0/0:18,0:17:48.16:0,48,718	1/1:1,20:21:60.19:777,60,0	1/1:0,13:13:36.12:467,36,0	1/1:0,4:4:12.04:155,12,0
chr10	24148973	.	C	CA	5336.30	PASS	AB=0.706;AC=46;AF=0.821;AN=56;BaseQRankSum=0.840;DP=440;FS=0.614;HRun=11;HaplotypeScore=65.7479;InbreedingCoeff=0.4818;MQ=75.54;MQ0=0;MQRankSum=0.530;QD=13.48;ReadPosRankSum=-1.046;VQSLOD=4.6586;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,8:9:15.03:152,15,0	1/1:0,8:8:17.96:161,18,0	0/0:11,0:11:15.98:0,16,110	0/1:10,0:10:3.46:3,0,18	1/1:6,16:25:13.06:425,13,0	1/1:2,17:21:50.77:484,51,0	1/1:2,8:10:24.05:244,24,0	0/1:7,13:20:15.61:393,0,16	1/1:0,0:13:22.73:114,23,0	1/1:3,1:26:58.22:315,58,0	1/1:5,4:21:44.42:300,44,0	0/1:1,10:11:11.21:79,0,11	1/1:6,22:30:33.54:485,34,0	1/1:5,12:17:6.01:61,6,0	0/0:15,2:17:11.38:0,11,271	0/0:15,0:15:35.83:0,36,278	1/1:1,0:8:2.40:13,2,0	1/1:12,0:16:19.92:111,20,0	1/1:3,1:12:17.53:103,18,0	1/1:2,2:17:43.95:256,44,0	1/1:1,0:13:14.20:71,14,0	0/1:5,4:9:25.43:131,0,25	1/1:3,14:17:15.84:342,16,0	1/1:0,7:7:15.03:152,15,0	1/1:4,18:21:27.70:446,28,0	1/1:10,0:22:46.53:245,47,0	1/1:20,0:23:33.17:208,33,0	1/1:2,1:6:7.33:41,7,0
chr10	24150361	.	ATGTGTGTGTG	A	5260.23	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=5.391;DP=519;FS=17.409;HRun=0;HaplotypeScore=158.8319;InbreedingCoeff=0.9124;MQ=62.83;MQ0=14;MQRankSum=-9.197;QD=27.98;ReadPosRankSum=1.444;VQSLOD=3.5079;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:33.10:0,33,1242	1/1:7,8:15:18.04:518,18,0	0/0:24,0:15:9.03:0,9,261	0/0:25,0:17:12.02:0,12,357	1/1:9,7:18:18.05:403,18,0	1/1:4,8:12:15.05:449,15,0	1/1:6,5:11:15.05:449,15,0	1/1:17,0:15:2.91:27,3,0	0/0:6,0:16:15.05:0,15,674	0/0:14,0:21:39.05:0,39,1704	0/0:16,0:26:30.10:0,30,1209	1/1:6,6:12:9.03:253,9,0	1/1:4,9:13:21.07:628,21,0	1/1:6,9:15:21.07:628,21,0	0/0:29,0:30:75.24:0,75,3353	0/0:8,0:8:18.06:0,18,742	0/0:13,0:20:18.06:0,18,784	0/0:8,0:8:9.03:0,9,278	0/0:14,0:14:15.05:0,15,646	0/0:18,0:34:45.14:0,45,1840	0/0:13,0:25:18.06:0,18,649	1/1:10,9:19:15.05:433,15,0	1/1:13,7:21:12.04:339,12,0	1/1:10,5:15:9.50:270,10,0	1/1:8,11:18:30.10:863,30,0	0/0:21,0:21:28.30:0,28,695	0/0:14,0:28:36.12:0,36,630	0/0:4,0:6:12.04:0,12,220
chr10	24153532	.	AG	A	491.91	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.749;DP=597;FS=0.000;HRun=1;HaplotypeScore=55.4718;InbreedingCoeff=0.9953;MQ=84.52;MQ0=0;MQRankSum=-3.747;QD=25.89;ReadPosRankSum=2.168;VQSLOD=3.4936;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:66.19:0,66,1005	0/0:14,0:14:42.14:0,42,671	0/0:20,0:20:57.14:0,57,843	0/0:16,0:16:48.15:0,48,714	0/0:26,0:26:78.23:0,78,1198	0/0:20,0:20:60.17:0,60,899	0/0:15,0:15:45.13:0,45,673	0/0:24,0:24:69.24:0,69,1103	0/0:15,0:15:45.15:0,45,719	0/0:21,0:21:63.21:0,63,1008	0/0:24,0:24:72.23:0,72,1123	0/0:25,0:25:72.25:0,72,1150	0/0:17,0:17:51.17:0,51,815	0/0:27,0:27:81.28:0,81,1292	0/0:20,0:20:60.20:0,60,959	0/0:28,0:28:84.26:0,84,1296	1/1:0,19:19:42.14:587,42,0	0/0:8,0:8:24.06:0,24,358	0/0:20,0:20:60.16:0,60,911	0/0:30,0:30:90.28:0,90,1392	0/0:8,0:8:24.08:0,24,383	0/0:15,0:15:45.15:0,45,719	0/0:36,0:36:99:0,108,1699	0/0:10,0:10:30.05:0,30,428	0/0:31,0:31:93.30:0,93,1458	0/0:33,0:33:99:0,99,1581	0/0:38,0:37:99:0,114,1781	0/0:14,0:14:39.13:0,39,623
chr10	24154076	.	T	TGAA	21077.78	PASS	AB=0.950;AC=43;AF=0.768;AN=56;BaseQRankSum=-13.443;DP=561;FS=0.762;HRun=0;HaplotypeScore=74.4406;InbreedingCoeff=0.9020;MQ=86.40;MQ0=0;MQRankSum=-7.094;QD=49.59;ReadPosRankSum=3.549;VQSLOD=6.4960;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,16:20:45.15:1004,45,0	1/1:1,7:9:24.08:524,24,0	0/0:25,0:24:56.95:0,57,862	0/0:18,0:18:48.12:0,48,728	1/1:2,16:18:51.10:1040,51,0	1/1:3,24:27:58.89:1336,59,0	1/1:3,14:17:39.01:870,39,0	1/1:10,13:26:54.14:1063,54,0	1/1:3,18:21:54.19:1186,54,0	1/1:2,21:23:57.20:1256,57,0	1/1:1,24:25:72.25:1607,72,0	1/1:2,12:14:36.12:804,36,0	1/1:3,27:30:78.07:1692,78,0	1/1:0,21:22:54.19:1205,54,0	0/0:26,0:26:78.27:0,78,1270	0/0:21,0:21:57.19:0,57,931	1/1:2,14:17:33.11:736,33,0	1/1:2,9:11:21.07:469,21,0	1/1:5,14:20:45.15:883,45,0	1/1:1,15:17:51.17:1089,51,0	1/1:3,19:22:48.16:1072,48,0	1/1:2,14:16:36.12:803,36,0	1/1:5,17:22:51.13:1089,51,0	1/1:4,11:15:26.82:601,27,0	1/1:0,13:14:33.11:737,33,0	0/1:18,1:19:9.85:10,0,825	0/0:41,0:41:99:0,117,1834	0/0:5,0:5:12.04:0,12,196
chr10	24154293	.	CT	C	6715.37	PASS	AB=1.000;AC=49;AF=0.875;AN=56;BaseQRankSum=2.382;DP=483;FS=11.636;HRun=10;HaplotypeScore=100.0536;InbreedingCoeff=0.7782;MQ=71.00;MQ0=3;MQRankSum=-4.873;QD=16.03;ReadPosRankSum=3.268;VQSLOD=4.2121;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,32:33:71.98:624,72,0	1/1:1,5:6:11.84:104,12,0	0/0:35,0:21:5.23:0,5,358	0/1:25,0:14:4.76:5,0,107	1/1:6,16:22:38.95:334,39,0	1/1:6,15:21:53.93:460,54,0	1/1:0,6:6:18:156,18,0	1/1:9,26:35:83.94:723,84,0	1/1:3,7:10:29.72:243,30,0	1/1:4,11:15:5.80:279,6,0	1/1:8,13:21:29.17:256,29,0	1/1:2,6:8:16.55:134,17,0	1/1:2,10:12:32.99:286,33,0	1/1:3,6:9:26.99:232,27,0	0/0:17,0:17:48.02:0,48,506	0/0:12,0:12:21.06:0,21,232	1/1:7,10:17:38.96:334,39,0	1/1:2,4:6:14.03:110,14,0	1/1:8,21:29:80.97:698,81,0	1/1:5,12:17:41.98:364,42,0	1/1:3,5:7:11.99:104,12,0	1/1:3,9:12:23.97:204,24,0	1/1:5,13:18:32.82:273,33,0	1/1:4,5:9:14.99:129,15,0	1/1:8,10:18:38.94:329,39,0	1/1:3,0:23:40.73:120,41,0	1/1:3,0:23:40.74:120,41,0	1/1:0,0:16:32.59:96,33,0
chr10	24154309	.	C	CT	5381.60	PASS	AB=0.773;AC=40;AF=0.714;AN=56;BaseQRankSum=3.473;DP=493;FS=2.171;HRun=9;HaplotypeScore=115.1316;InbreedingCoeff=0.7881;MQ=63.74;MQ0=6;MQRankSum=-9.968;QD=17.30;ReadPosRankSum=-2.334;VQSLOD=3.7840;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:55.99:0,56,474	1/1:2,2:4:9.02:92,9,0	0/0:41,0:17:20.81:0,21,171	0/0:33,0:15:9.55:0,10,160	1/1:6,15:21:33.08:355,33,0	1/1:4,13:17:10.01:326,10,0	1/1:6,7:13:30:302,30,0	1/1:20,16:35:24.59:464,25,0	1/1:2,7:9:27.03:278,27,0	1/1:8,8:15:24.05:256,24,0	1/1:6,14:20:32.12:335,32,0	1/1:0,10:10:29.78:296,30,0	1/1:4,8:11:21.06:232,21,0	1/1:3,8:11:21.06:231,21,0	0/0:16,0:16:32.96:0,33,286	0/1:9,2:11:9.16:9,0,158	1/1:6,10:16:33.07:356,33,0	0/1:4,3:7:17.02:57,0,17	1/1:17,10:27:42.08:446,42,0	1/1:10,5:16:18.03:184,18,0	1/1:3,4:6:6.02:66,6,0	1/1:3,9:12:24.01:242,24,0	1/1:4,14:18:33.93:349,34,0	1/1:2,8:10:15.03:157,15,0	1/1:3,14:17:33.05:349,33,0	0/0:19,0:19:50.71:0,51,429	0/0:21,0:21:47.95:0,48,413	0/0:16,0:16:35.99:0,36,313
chr10	24154535	.	AAAC	A	13504.80	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=10.187;DP=602;FS=0.391;HRun=0;HaplotypeScore=92.7397;InbreedingCoeff=0.9910;MQ=64.21;MQ0=0;MQRankSum=-0.583;QD=30.62;ReadPosRankSum=1.803;VQSLOD=4.9528;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,27:34:69.23:998,69,0	1/1:5,12:17:36.08:497,36,0	0/0:24,0:19:45.15:0,45,842	0/0:21,0:20:13.45:0,13,513	1/1:5,22:27:59.42:778,59,0	1/1:4,17:21:45.11:627,45,0	1/1:7,18:25:36.12:521,36,0	1/1:13,24:37:72.22:1005,72,0	1/1:3,19:22:51.17:738,51,0	1/1:6,20:26:60.20:866,60,0	1/1:3,13:16:39.13:564,39,0	1/1:3,17:20:48.16:694,48,0	1/1:6,14:19:45.15:651,45,0	1/1:1,23:24:57.15:801,57,0	0/0:17,0:17:36.12:0,36,737	0/0:21,1:22:19.81:0,20,1148	1/1:6,21:27:57.19:824,57,0	1/1:6,11:17:30.93:413,31,0	1/1:1,8:9:24.08:345,24,0	1/1:3,16:19:48.12:671,48,0	1/1:0,8:8:24.08:347,24,0	1/1:4,9:13:24.08:347,24,0	1/1:3,13:15:23.36:384,23,0	1/1:0,18:18:39.13:564,39,0	1/1:2,23:25:60.20:868,60,0	0/0:28,0:28:16.87:0,17,1109	0/0:40,0:40:93.27:0,93,1817	0/0:9,0:9:27.09:0,27,546
chr10	24154953	.	TA	T	17151.23	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=7.519;DP=591;FS=1.670;HRun=2;HaplotypeScore=60.4012;InbreedingCoeff=0.9670;MQ=83.06;MQ0=0;MQRankSum=-4.630;QD=36.73;ReadPosRankSum=3.060;VQSLOD=5.5126;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,29:29:78.25:1013,78,0	1/1:0,8:8:21.07:273,21,0	0/0:14,0:14:39.13:0,39,580	0/0:20,0:20:57.19:0,57,842	1/1:0,27:27:72.23:935,72,0	1/1:0,20:20:60.20:779,60,0	1/1:0,15:15:39.13:505,39,0	1/1:0,39:39:99:1519,117,0	1/1:0,20:20:57.19:740,57,0	1/1:0,29:29:87.26:1111,87,0	1/1:0,22:22:57.19:740,57,0	1/1:0,25:25:69.22:895,69,0	1/1:0,21:21:63.20:818,63,0	1/1:0,21:21:63.20:818,63,0	0/0:21,0:21:63.20:0,63,924	0/0:13,1:14:3.18:0,3,535	1/1:0,19:19:54.17:698,54,0	1/1:0,12:12:36.12:466,36,0	1/1:1,24:25:72.22:934,72,0	1/1:1,27:28:78.25:1013,78,0	1/1:1,19:20:57.19:740,57,0	1/1:0,17:17:48.16:623,48,0	1/1:1,27:28:81.26:1052,81,0	1/1:0,25:25:66.21:857,66,0	1/1:0,17:17:48.16:623,48,0	0/0:19,0:19:54.18:0,54,788	0/0:29,0:28:87.28:0,87,1281	0/0:7,0:7:21.07:0,21,315
chr10	24156562	.	CAAAT	C	8031.52	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-1.594;DP=417;FS=3.433;HRun=0;HaplotypeScore=94.9321;InbreedingCoeff=0.9923;MQ=81.09;MQ0=0;MQRankSum=-7.037;QD=45.63;ReadPosRankSum=2.720;VQSLOD=5.5731;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,11:14:24.08:454,24,0	1/1:0,4:4:12.04:227,12,0	0/0:19,0:18:40.62:0,41,753	0/0:14,0:13:29.80:0,30,714	1/1:0,20:20:54.19:1022,54,0	1/1:4,13:17:36.04:642,36,0	1/1:1,13:14:36.04:642,36,0	1/1:4,21:25:63.19:1124,63,0	0/0:10,0:10:29.68:0,30,634	0/0:16,0:16:48.16:0,48,1231	0/0:28,0:28:81.26:0,81,2109	1/1:0,6:6:15.05:284,15,0	1/1:2,15:17:39.13:738,39,0	1/1:0,10:10:27.09:511,27,0	0/0:10,0:10:30.10:0,30,802	0/0:19,0:19:57.20:0,57,1495	0/0:14,0:14:42.14:0,42,1095	0/0:17,0:17:39.05:0,39,902	0/0:15,0:15:42.08:0,42,920	0/0:23,0:23:69.22:0,69,1779	0/0:10,0:10:30.08:0,30,745	1/1:0,9:9:27.09:512,27,0	1/1:0,13:13:30.10:565,30,0	1/1:1,9:10:24.08:455,24,0	1/1:1,16:17:45.15:853,45,0	0/0:17,0:17:51.18:0,51,1293	0/0:12,0:12:36.12:0,36,962	0/0:17,0:17:51.11:0,51,1216
chr10	24156573	.	G	GA	1361.03	PASS	AB=0.543;AC=5;AF=0.089;AN=56;BaseQRankSum=-6.691;DP=423;FS=7.035;HRun=7;HaplotypeScore=94.3240;InbreedingCoeff=0.8305;MQ=77.22;MQ0=0;MQRankSum=-1.119;QD=26.17;ReadPosRankSum=0.181;VQSLOD=3.7318;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:11:27.04:0,27,260	0/0:4,0:4:12.02:0,12,115	0/0:15,0:14:33.23:0,33,324	0/0:14,0:13:21.87:0,22,202	0/0:23,0:23:60.09:0,60,578	0/0:17,0:17:42.06:0,42,404	0/0:15,0:15:39.05:0,39,370	0/0:23,0:23:42.05:0,42,404	0/0:11,0:11:24.02:0,24,226	0/0:15,0:15:39.06:0,39,377	0/0:28,0:28:84.12:0,84,805	0/0:6,0:6:15.02:0,15,144	0/0:17,0:17:45.02:0,45,423	0/0:10,0:10:21.03:0,21,202	0/0:10,0:10:24.04:0,24,232	0/0:20,0:20:57.09:0,57,550	0/0:15,0:15:33.05:0,33,318	0/0:16,0:16:39.01:0,39,366	0/0:15,0:15:44.98:0,45,416	0/0:23,0:23:63.10:0,63,608	0/0:12,0:12:33.04:0,33,313	0/0:9,0:9:24.04:0,24,231	0/0:14,0:14:35.55:0,36,327	0/0:10,0:10:27.04:0,27,260	0/0:17,0:17:45.07:0,45,433	0/1:3,16:19:3.81:512,0,4	1/1:2,13:15:33.10:399,33,0	1/1:0,18:18:48.15:580,48,0
chr10	24156759	.	C	CT	6860.11	PASS	AB=1.000;AC=34;AF=0.607;AN=56;BaseQRankSum=10.390;DP=367;FS=2.969;HRun=6;HaplotypeScore=49.2012;InbreedingCoeff=0.8657;MQ=74.55;MQ0=0;MQRankSum=3.067;QD=31.04;ReadPosRankSum=1.242;VQSLOD=5.3802;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,19:20:51.16:642,51,0	1/1:0,4:4:12.04:151,12,0	0/1:7,0:7:5.89:6,0,94	0/1:7,0:7:3.52:4,0,18	1/1:0,24:24:69.22:865,69,0	1/1:1,15:16:39.12:490,39,0	1/1:1,7:8:21.07:264,21,0	1/1:4,24:28:72.20:877,72,0	0/0:10,0:10:30.07:0,30,306	0/0:13,0:13:33.07:0,33,336	0/0:14,0:14:42.08:0,42,421	1/1:0,7:7:21.07:264,21,0	1/1:0,11:11:30.10:377,30,0	1/1:0,10:10:27.09:340,27,0	0/0:12,0:12:36.07:0,36,361	0/0:16,0:16:45.10:0,45,459	0/0:26,0:26:72.15:0,72,730	0/0:20,0:20:57.09:0,57,569	0/0:17,0:17:42.08:0,42,424	0/0:10,0:10:30.07:0,30,306	0/0:8,0:8:24.03:0,24,237	1/1:0,2:2:6.02:75,6,0	1/1:0,8:8:24.08:302,24,0	1/1:0,5:5:15.05:188,15,0	1/1:1,6:7:18.06:226,18,0	1/1:2,19:21:32.55:694,33,0	1/1:5,21:26:60.19:755,60,0	1/1:0,10:10:27.09:340,27,0
chr10	24157549	.	T	TAA	934.89	PASS	AB=0.972;AC=8;AF=0.143;AN=56;BaseQRankSum=1.199;DP=381;FS=3.270;HRun=11;HaplotypeScore=63.1013;InbreedingCoeff=0.6892;MQ=69.89;MQ0=2;MQRankSum=-1.482;QD=11.00;ReadPosRankSum=-2.477;VQSLOD=1.2278;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:15:20.88:0,21,303	0/0:2,0:3:8.75:0,9,70	0/1:22,0:18:2.83:3,0,81	0/0:12,0:8:12.22:0,12,101	0/0:16,0:16:21.87:0,22,331	0/0:8,0:9:6.60:0,7,109	0/0:9,0:9:21.02:0,21,204	0/0:17,0:18:5.04:0,5,220	0/0:17,0:18:47.76:0,48,441	0/0:13,0:13:14.96:0,15,142	0/0:11,0:11:17.60:0,18,198	0/0:9,0:9:20.99:0,21,198	0/0:17,0:18:44.75:0,45,412	0/0:13,0:14:32.72:0,33,302	0/0:21,0:22:38.80:0,39,421	0/0:14,0:15:38.75:0,39,355	0/0:18,0:18:45.03:0,45,435	0/0:6,0:5:8.60:0,9,87	0/0:9,0:11:11.76:0,12,211	0/0:13,0:13:20.96:0,21,197	0/0:9,0:10:17.13:0,17,167	0/0:12,0:12:23.95:0,24,233	0/0:11,0:11:30.04:0,30,291	0/1:15,1:17:1.65:2,0,319	0/0:12,0:12:29.76:0,30,268	1/1:4,9:15:29.56:378,30,0	1/1:6,15:23:38.58:491,39,0	1/1:3,4:8:17.52:203,18,0
chr10	24157753	.	CTT	C	5104.71	PASS	AB=0.578;AC=29;AF=0.518;AN=56;BaseQRankSum=-9.522;DP=544;FS=0.372;HRun=13;HaplotypeScore=82.4633;InbreedingCoeff=0.6425;MQ=71.60;MQ0=1;MQRankSum=-1.542;QD=15.06;ReadPosRankSum=2.143;VQSLOD=4.0509;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,13:17:35.74:332,36,0	0/0:6,1:18:1.87:0,2,100	0/0:17,0:14:26.08:0,26,237	0/0:9,0:7:12.99:0,13,115	0/1:3,2:14:26.72:27,0,89	0/1:4,2:25:9.25:9,0,131	0/1:9,1:20:3.14:3,0,67	0/0:10,1:34:29.42:0,29,177	1/1:5,13:18:32.97:320,33,0	1/1:4,17:21:50.92:481,51,0	1/1:4,15:19:35.98:349,36,0	0/0:5,0:21:42.94:0,43,181	0/0:5,1:20:7.35:0,7,111	0/0:5,0:12:17.97:0,18,76	0/0:20,0:25:65.95:0,66,768	0/0:8,0:9:23.56:0,24,293	1/1:1,17:19:38.77:361,39,0	1/1:2,19:22:53.80:506,54,0	1/1:6,10:16:27.45:260,27,0	1/1:6,14:24:35.36:388,35,0	1/1:4,27:31:69.05:669,69,0	0/1:2,2:16:24.73:25,0,61	0/1:5,1:14:3.12:3,0,86	0/0:4,1:23:22.34:0,22,189	0/0:5,1:13:8.36:0,8,48	1/1:8,14:22:41.99:407,42,0	1/1:3,26:29:74.84:710,75,0	1/1:0,9:11:20.96:253,21,0
chr10	24160755	.	GT	G	240.45	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.537;DP=427;FS=8.737;HRun=8;HaplotypeScore=38.7487;InbreedingCoeff=0.9187;MQ=71.91;MQ0=0;MQRankSum=-1.266;QD=20.04;ReadPosRankSum=0.028;VQSLOD=2.4753;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,12:12:35.98:335,36,0	0/0:10,0:10:30.08:0,30,352	0/0:8,0:8:21.05:0,21,242	0/0:5,0:5:9.03:0,9,108	0/0:23,0:23:63.17:0,63,741	0/0:27,0:27:75.22:0,75,895	0/0:9,0:9:24.07:0,24,289	0/0:27,0:27:75.23:0,75,906	0/0:9,0:9:24.07:0,24,290	0/0:13,0:13:36.10:0,36,426	0/0:19,0:19:48.14:0,48,570	0/0:9,0:9:24.07:0,24,290	0/0:12,0:12:30.09:0,30,362	0/0:13,0:13:33.09:0,33,387	0/0:12,0:12:36.11:0,36,435	0/0:9,0:9:21.05:0,21,244	0/0:31,0:31:81.25:0,81,975	0/0:18,0:18:48.10:0,48,554	0/0:27,0:27:63.15:0,63,736	0/0:15,0:15:42.13:0,42,507	0/0:8,0:8:24.05:0,24,276	0/0:11,0:11:33.09:0,33,387	0/0:17,0:17:45.13:0,45,532	0/0:6,0:6:18.06:0,18,217	0/0:18,0:18:54.17:0,54,652	0/0:20,0:20:57.12:0,57,652	0/0:32,0:32:84.23:0,84,990	0/0:7,0:7:21.02:0,21,218
chr10	24163036	.	CA	C	12709.66	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=3.985;DP=541;FS=0.000;HRun=6;HaplotypeScore=56.2665;InbreedingCoeff=0.9933;MQ=78.63;MQ0=0;MQRankSum=-3.725;QD=28.06;ReadPosRankSum=3.783;VQSLOD=5.2419;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,25:27:66.16:709,66,0	1/1:0,6:6:18.05:193,18,0	0/0:16,0:16:38.91:0,39,465	0/0:23,0:23:22.08:0,22,486	1/1:0,20:20:57.14:610,57,0	1/1:1,18:19:48.12:516,48,0	1/1:0,8:8:21.05:226,21,0	1/1:1,36:37:99:1116,105,0	1/1:1,17:18:39.10:419,39,0	1/1:2,19:21:57.14:612,57,0	1/1:2,17:19:48.12:516,48,0	1/1:1,16:17:45.11:484,45,0	1/1:3,24:27:40.60:652,41,0	1/1:2,19:21:54.14:580,54,0	0/0:18,0:18:51.17:0,51,671	0/0:31,0:30:84.27:0,84,1105	1/1:0,23:23:69.17:742,69,0	1/1:1,6:7:18.04:193,18,0	1/1:2,12:14:36.09:387,36,0	1/1:1,18:19:48.12:516,48,0	1/1:1,13:14:39.10:419,39,0	1/1:3,17:20:51.13:548,51,0	1/1:1,13:14:36.09:387,36,0	1/1:1,13:14:36.09:387,36,0	1/1:2,18:20:54.13:580,54,0	1/1:2,28:30:87.18:917,87,0	1/1:1,24:25:56.99:613,57,0	1/1:0,13:13:36.09:387,36,0
chr10	24163331	.	G	GAA	6090.44	PASS	AB=0.583;AC=45;AF=0.804;AN=56;BaseQRankSum=-2.376;DP=266;FS=2.628;HRun=6;HaplotypeScore=32.9503;InbreedingCoeff=0.7126;MQ=62.55;MQ0=6;MQRankSum=-0.136;QD=27.81;ReadPosRankSum=0.684;VQSLOD=2.9384;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:42.13:0,42,511	1/1:1,3:4:9.03:152,9,0	0/0:14,0:4:4.48:0,4,38	0/0:5,0:3:3.01:0,3,37	1/1:0,11:11:33.07:515,33,0	1/1:1,8:9:21.07:355,21,0	1/1:0,6:7:18.06:304,18,0	1/1:2,17:19:51.14:794,51,0	1/1:1,0:6:12.48:44,12,0	1/1:0,0:13:29.78:105,30,0	0/1:4,0:14:10.66:64,0,11	1/1:1,6:7:12.04:203,12,0	1/1:1,7:8:15.05:254,15,0	1/1:1,5:6:15.05:254,15,0	0/0:4,0:4:12.04:0,12,146	0/0:7,0:7:12.01:0,12,184	1/1:1,0:14:24.95:88,25,0	1/1:1,0:8:17.19:60,17,0	1/1:0,0:6:12.95:44,13,0	1/1:3,0:14:26.87:93,27,0	1/1:1,0:5:7.49:26,7,0	1/1:0,2:2:3.01:50,3,0	1/1:0,5:5:15.05:253,15,0	1/1:0,6:5:15.05:254,15,0	1/1:1,13:14:36.12:609,36,0	1/1:2,11:13:33.11:558,33,0	1/1:1,11:13:27.09:454,27,0	1/1:0,14:14:33.11:558,33,0
chr10	24163558	.	C	CT	3996.94	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-13.178;DP=480;FS=4.962;HRun=9;HaplotypeScore=65.1929;InbreedingCoeff=0.9819;MQ=78.41;MQ0=0;MQRankSum=-0.761;QD=23.93;ReadPosRankSum=0.726;VQSLOD=4.6128;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,29:35:32.12:811,32,0	0/0:13,0:13:35.99:0,36,312	0/0:16,0:16:27.45:0,27,236	0/0:15,0:15:23.96:0,24,203	0/0:20,0:20:53.25:0,53,456	0/0:22,0:22:65.99:0,66,573	0/0:12,0:12:29.81:0,30,260	0/0:21,0:21:47.87:0,48,416	1/1:3,13:16:13.06:372,13,0	1/1:2,17:19:25.06:493,25,0	1/1:3,14:17:15.97:389,16,0	0/0:11,0:11:32.98:0,33,283	0/0:15,0:15:44.97:0,45,387	0/0:21,0:22:55.99:0,56,471	0/0:23,0:23:59.96:0,60,517	0/0:17,0:18:53.03:0,53,449	1/1:3,15:18:10.04:339,10,0	1/1:2,5:7:15.04:166,15,0	1/1:2,19:21:57.15:623,57,0	1/1:5,15:20:22.08:472,22,0	1/1:1,13:14:30.08:332,30,0	0/0:14,0:14:41.97:0,42,359	0/0:7,0:7:21:0,21,182	0/0:15,0:15:35.96:0,36,309	0/0:12,0:12:35.98:0,36,309	0/0:17,0:17:47.99:0,48,417	0/0:28,0:28:71.97:0,72,625	0/0:12,0:12:32.94:0,33,275
chr10	24168538	.	A	AT	9868.48	PASS	AB=0.545;AC=47;AF=0.839;AN=56;BaseQRankSum=-7.999;DP=420;FS=10.069;HRun=8;HaplotypeScore=39.5632;InbreedingCoeff=0.8154;MQ=90.01;MQ0=1;MQRankSum=-4.229;QD=27.80;ReadPosRankSum=2.807;VQSLOD=4.7228;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,15:19:41.96:425,42,0	1/1:0,5:5:15.04:173,15,0	0/0:26,0:24:23.49:0,23,337	0/0:12,0:12:20.02:0,20,190	1/1:1,14:16:20.52:472,21,0	1/1:3,12:15:30.09:346,30,0	1/1:2,8:10:24.07:277,24,0	1/1:6,22:28:66.16:741,66,0	1/1:2,13:15:40:452,40,0	1/1:5,17:22:51.13:576,51,0	1/1:0,13:13:39.12:450,39,0	1/1:1,11:12:30.09:346,30,0	1/1:3,12:15:36.11:415,36,0	1/1:1,17:18:42.12:485,42,0	0/0:11,0:11:30.02:0,30,275	0/0:16,0:16:45.02:0,45,412	1/1:3,6:9:18.05:208,18,0	1/1:3,8:11:18.05:208,18,0	1/1:3,6:9:18.05:200,18,0	1/1:3,18:21:57.16:649,57,0	1/1:3,11:14:30.09:346,30,0	0/1:1,5:6:9.41:155,0,9	1/1:2,8:10:1.19:220,1,0	1/1:1,8:9:21.06:242,21,0	1/1:1,14:15:42.12:485,42,0	1/1:2,25:27:75.21:855,75,0	1/1:1,22:23:63.19:727,63,0	1/1:0,12:12:36.11:415,36,0
chr10	24168573	.	A	ATT	454.43	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-0.769;DP=349;FS=1.314;HRun=8;HaplotypeScore=64.2559;InbreedingCoeff=0.8977;MQ=78.61;MQ0=1;MQRankSum=-3.061;QD=22.72;ReadPosRankSum=0.635;VQSLOD=2.5477;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,13:19:36.11:549,36,0	0/0:4,0:4:12.03:0,12,134	0/0:20,0:19:27.21:0,27,308	0/0:14,0:13:17.04:0,17,172	0/0:13,0:13:27.07:0,27,301	0/0:10,0:10:24.06:0,24,266	0/0:11,0:11:27.07:0,27,300	0/0:20,0:20:39.02:0,39,393	0/0:12,0:12:36.10:0,36,399	0/0:15,0:15:39.09:0,39,434	0/0:10,0:10:21.05:0,21,234	0/0:10,0:10:27.07:0,27,301	0/0:13,0:13:36.09:0,36,401	0/0:14,0:14:42.11:0,42,468	0/0:13,0:13:33.09:0,33,368	0/0:13,0:13:30.07:0,30,334	0/0:5,0:5:12.01:0,12,122	0/0:6,0:6:18.05:0,18,200	0/0:7,0:7:18.05:0,18,199	0/0:19,0:19:51.11:0,51,549	0/0:12,0:12:27.07:0,27,300	0/0:7,0:7:21.06:0,21,234	0/0:11,0:11:21.05:0,21,234	0/0:8,0:8:21.04:0,21,233	0/0:14,0:14:42.11:0,42,468	0/0:16,0:16:39.07:0,39,423	0/0:20,0:20:54.14:0,54,599	0/0:11,0:9:27.05:0,27,288
chr10	24178668	.	CT	C	368.90	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=5.217;DP=458;FS=8.830;HRun=7;HaplotypeScore=42.5291;InbreedingCoeff=0.5910;MQ=70.09;MQ0=0;MQRankSum=-0.297;QD=15.37;ReadPosRankSum=0.875;VQSLOD=2.3699;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,15:17:45.10:459,45,0	0/0:12,0:12:33.09:0,33,392	0/1:7,0:7:13.86:14,0,129	0/0:6,0:6:5.63:0,6,70	0/0:31,0:31:87.27:0,87,1084	0/0:20,0:20:60.19:0,60,755	0/0:15,0:15:42.13:0,42,525	0/0:31,0:31:90.26:0,90,1100	0/0:8,0:8:24.08:0,24,302	0/0:22,0:22:63.20:0,63,793	0/0:17,0:17:51.16:0,51,632	0/0:19,0:19:57.18:0,57,717	0/0:10,0:10:24.08:0,24,302	0/0:14,0:14:39.12:0,39,489	0/0:9,0:9:27.09:0,27,340	0/0:22,0:22:60.18:0,60,743	0/0:19,0:19:51.13:0,51,624	0/0:10,0:10:24.08:0,24,302	0/0:26,0:26:60.19:0,60,753	0/0:40,0:40:99:0,108,1355	0/0:4,0:4:12.04:0,12,149	0/0:9,0:9:27.09:0,27,340	0/0:11,0:11:33.11:0,33,415	0/0:9,0:9:27.09:0,27,339	0/0:17,0:17:48.15:0,48,604	0/0:16,0:16:48.15:0,48,601	0/0:25,0:25:66.20:0,66,815	0/0:12,0:12:33.09:0,33,401
chr10	24181071	.	CA	C	1484.31	PASS	AB=0.718;AC=41;AF=0.732;AN=56;BaseQRankSum=3.393;DP=420;FS=2.944;HRun=16;HaplotypeScore=60.0371;InbreedingCoeff=0.3872;MQ=70.14;MQ0=5;MQRankSum=0.331;QD=4.51;ReadPosRankSum=1.631;VQSLOD=1.2964;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:19:8.19:0,8,156	1/1:0,4:4:8.83:54,9,0	0/0:16,1:8:4.52:0,5,58	0/0:18,1:9:11.55:0,12,59	1/1:7,7:17:20.66:107,21,0	0/1:11,7:18:5.65:76,0,6	0/1:7,5:14:11.79:47,0,12	1/1:12,6:19:12.76:76,13,0	1/1:4,0:7:8.12:23,8,0	1/1:7,0:18:22.43:74,22,0	1/1:6,0:20:29.10:83,29,0	0/1:10,8:18:0.47:105,0,0	1/1:6,6:13:3.27:122,3,0	1/1:11,6:20:4.37:103,4,0	0/0:15,2:18:6.99:0,7,253	0/0:16,2:18:10.44:0,10,173	1/1:1,0:8:16.08:46,16,0	1/1:3,0:4:1.99:6,2,0	1/1:3,0:11:16.28:47,16,0	1/1:4,0:21:28.41:82,28,0	1/1:5,0:10:10.12:29,10,0	1/1:2,5:8:10.78:60,11,0	0/1:5,9:14:18.94:99,0,19	1/1:6,4:10:20.50:125,21,0	1/1:10,4:15:23.61:125,24,0	1/1:11,2:13:5.53:35,6,0	1/1:18,15:34:1.62:111,2,0	0/1:10,0:11:14.39:14,0,18
chr10	24186381	.	C	CT	14212.93	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-9.348;DP=622;FS=7.761;HRun=9;HaplotypeScore=57.4269;InbreedingCoeff=0.9765;MQ=80.33;MQ0=0;MQRankSum=-2.510;QD=26.22;ReadPosRankSum=0.894;VQSLOD=5.2786;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,24:27:37.59:639,38,0	1/1:1,9:10:30.04:318,30,0	0/0:15,0:17:31.99:0,32,263	0/0:19,0:18:14.20:0,14,213	1/1:3,39:42:99:1252,117,0	1/1:1,29:30:78.21:861,78,0	1/1:0,21:21:57.15:631,57,0	1/1:7,27:34:81.18:876,81,0	1/1:8,19:27:63.16:688,63,0	1/1:1,17:18:48.13:531,48,0	1/1:4,18:22:25.08:505,25,0	1/1:1,15:16:42.11:465,42,0	1/1:3,24:27:60.16:661,60,0	1/1:1,18:19:45.12:498,45,0	0/0:22,0:23:62.02:0,62,527	0/0:21,0:21:50.98:0,51,442	1/1:0,17:17:48.13:530,48,0	1/1:7,8:15:21.02:220,21,0	1/1:3,15:18:42.09:453,42,0	1/1:3,23:26:66.14:717,66,0	1/1:2,16:18:45.12:498,45,0	1/1:5,21:26:60.16:664,60,0	1/1:6,20:26:63.15:685,63,0	1/1:2,14:15:27.07:299,27,0	1/1:1,27:28:69.19:763,69,0	1/1:4,18:22:48.13:531,48,0	1/1:4,28:32:75.20:830,75,0	1/1:1,4:5:9.02:100,9,0
chr10	24190136	.	A	AG	1811.30	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-2.369;DP=561;FS=4.598;HRun=1;HaplotypeScore=120.5232;InbreedingCoeff=0.9699;MQ=73.24;MQ0=1;MQRankSum=0.186;QD=40.25;ReadPosRankSum=0.795;VQSLOD=3.2006;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:57.18:0,57,740	0/0:12,0:12:33.11:0,33,428	0/0:21,0:20:54.15:0,54,669	0/0:22,0:21:53.25:0,53,687	0/0:35,0:35:99:0,99,1285	0/0:27,0:27:78.25:0,78,1013	0/0:16,0:16:48.16:0,48,623	0/0:24,0:23:63.20:0,63,806	0/0:14,0:14:42.14:0,42,545	0/0:23,0:23:66.19:0,66,841	0/0:19,0:19:57.17:0,57,727	0/0:24,0:24:69.22:0,69,896	0/0:22,0:22:63.20:0,63,817	0/0:23,0:23:63.20:0,63,818	1/1:0,20:20:60.20:899,60,0	1/1:0,25:25:69.23:1034,69,0	0/0:17,0:16:51.17:0,51,662	0/0:14,0:14:36.12:0,36,467	0/0:15,0:15:42.14:0,42,544	0/0:21,0:21:63.20:0,63,818	0/0:9,0:9:27.07:0,27,335	0/0:19,0:19:57.19:0,57,739	0/0:16,0:16:48.16:0,48,623	0/0:13,0:13:36.12:0,36,466	0/0:24,0:24:72.23:0,72,934	0/0:25,0:25:72.23:0,72,923	0/0:31,0:31:93.30:0,93,1205	0/0:6,0:6:9.02:0,9,103
chr10	24190500	.	C	CA	9407.23	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=-13.905;DP=524;FS=1.554;HRun=8;HaplotypeScore=49.7182;InbreedingCoeff=0.9917;MQ=70.41;MQ0=1;MQRankSum=1.932;QD=29.31;ReadPosRankSum=1.437;VQSLOD=4.9280;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,23:26:60.18:692,60,0	1/1:1,6:7:18.05:208,18,0	0/0:10,0:9:13.32:0,13,138	0/0:16,0:15:18.57:0,19,234	1/1:1,30:31:90.27:1039,90,0	1/1:1,26:26:66.20:762,66,0	1/1:2,11:14:32.93:361,33,0	1/1:4,31:35:93.24:1047,93,0	0/0:16,0:16:36:0,36,329	0/0:17,0:17:45.02:0,45,412	0/0:24,0:24:69.02:0,69,627	1/1:3,15:18:45.13:519,45,0	1/1:2,15:17:17.75:457,18,0	1/1:1,14:15:42.12:485,42,0	0/0:20,0:20:59.99:0,60,537	0/0:14,0:14:42.01:0,42,380	0/0:12,0:12:29.98:0,30,268	0/0:15,0:15:39.02:0,39,357	0/0:20,0:18:51.03:0,51,466	0/0:32,0:32:78.03:0,78,714	0/0:6,0:6:18.01:0,18,165	1/1:1,19:20:26.69:561,27,0	1/1:0,15:15:45.13:519,45,0	1/1:1,10:11:27.08:312,27,0	1/1:1,16:17:48.14:554,48,0	1/1:1,23:24:44.74:769,45,0	1/1:8,24:32:72.21:831,72,0	1/1:2,8:11:26.91:291,27,0
chr10	24191244	.	G	GA	11832.21	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-7.970;DP=551;FS=29.786;HRun=9;HaplotypeScore=48.7646;InbreedingCoeff=0.8989;MQ=61.29;MQ0=3;MQRankSum=0.855;QD=24.50;ReadPosRankSum=1.572;VQSLOD=3.2972;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:30:71.96:0,72,625	1/1:1,9:10:27.07:299,27,0	0/0:19,0:8:3:0,3,88	0/0:18,0:8:14.27:0,14,145	1/1:4,23:27:40.11:657,40,0	1/1:3,12:16:38.94:412,39,0	1/1:4,13:16:30.08:332,30,0	1/1:3,21:24:63.10:673,63,0	1/1:5,10:15:13.34:252,13,0	1/1:4,18:22:54.15:597,54,0	1/1:5,25:30:52.15:800,52,0	1/1:3,12:15:39.11:430,39,0	1/1:2,12:14:30.08:331,30,0	1/1:3,7:9:18.04:191,18,0	1/1:4,10:14:27.07:297,27,0	1/1:2,21:23:30.93:552,31,0	1/1:3,22:25:63.17:697,63,0	1/1:4,21:26:34.80:581,35,0	1/1:1,12:13:36.08:388,36,0	1/1:3,21:24:57.15:631,57,0	1/1:1,6:7:12.03:133,12,0	1/1:0,18:18:48.13:531,48,0	1/1:4,16:20:16.14:405,16,0	1/1:2,22:24:60.16:664,60,0	1/1:5,15:20:30.74:532,31,0	1/1:7,18:25:34.34:544,34,0	1/1:7,21:27:25.14:505,25,0	1/1:1,14:15:36.10:398,36,0
chr10	24191415	.	CCAAA	C	14258.77	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-0.737;DP=575;FS=0.000;HRun=0;HaplotypeScore=121.0996;InbreedingCoeff=0.8784;MQ=62.62;MQ0=5;MQRankSum=4.638;QD=26.75;ReadPosRankSum=3.943;VQSLOD=4.5389;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,20:28:24.67:515,25,0	1/1:2,7:9:21.03:314,21,0	0/0:21,0:14:15.05:0,15,308	0/0:21,0:13:12.04:0,12,236	1/1:5,25:30:69.16:1047,69,0	1/1:2,10:12:21.07:343,21,0	1/1:3,7:10:9.03:147,9,0	1/1:19,7:25:21.05:295,21,0	1/1:7,8:15:15.05:245,15,0	1/1:4,17:20:51.17:831,51,0	1/1:11,23:34:57.19:904,57,0	1/1:7,12:19:24:391,24,0	1/1:6,16:22:39.13:637,39,0	1/1:4,12:16:21.07:343,21,0	1/1:3,17:19:45.15:735,45,0	1/1:11,21:32:45.15:735,45,0	1/1:3,12:15:39.13:635,39,0	1/1:5,6:11:15.05:245,15,0	1/1:13,8:18:23.89:327,24,0	1/1:10,18:28:54.15:852,54,0	1/1:5,6:11:12.04:184,12,0	1/1:7,9:16:23.98:333,24,0	1/1:4,14:18:30.10:490,30,0	1/1:1,13:14:33.04:508,33,0	1/1:5,25:30:63.22:1029,63,0	1/1:9,21:30:60.20:972,60,0	1/1:7,24:31:54.18:881,54,0	1/1:6,8:13:8.85:326,9,0
chr10	24193320	.	A	ATC	14850.28	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-18.728;DP=665;FS=5.320;HRun=0;HaplotypeScore=69.4739;InbreedingCoeff=0.9956;MQ=81.82;MQ0=3;MQRankSum=-2.676;QD=49.83;ReadPosRankSum=3.078;VQSLOD=5.7305;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,163,2316	1/1:0,4:4:12.04:220,12,0	0/0:26,0:26:69.21:0,69,963	0/0:31,0:31:81.24:0,81,1126	1/1:1,15:15:45.15:825,45,0	1/1:1,21:23:57.20:1045,57,0	1/1:2,22:24:57.20:1045,57,0	1/1:1,21:22:60.19:1070,60,0	0/0:24,0:24:69.23:0,69,987	0/0:30,0:30:87.28:0,87,1216	0/0:14,0:14:39.13:0,39,559	1/1:1,24:26:72.25:1317,72,0	1/1:1,26:27:75.26:1374,75,0	1/1:0,28:28:81.28:1485,81,0	0/0:27,0:27:81.26:0,81,1142	0/0:25,0:25:75.25:0,75,1075	0/0:29,0:29:87.28:0,87,1226	0/0:25,0:25:72.24:0,72,1028	0/0:27,0:27:81.23:0,81,1107	0/0:13,0:13:33.11:0,33,473	0/0:41,0:41:99:0,117,1627	1/1:0,11:11:27.09:495,27,0	1/1:0,12:12:36.12:656,36,0	1/1:2,16:18:48.16:880,48,0	1/1:0,14:14:42.14:770,42,0	1/1:1,32:33:53.32:1633,53,0	1/1:0,25:25:75.26:1374,75,0	1/1:1,13:12:36.12:660,36,0
chr10	24193452	.	A	AG	10876.19	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-15.464;DP=600;FS=5.017;HRun=3;HaplotypeScore=56.6009;InbreedingCoeff=0.9814;MQ=85.64;MQ0=0;MQRankSum=-2.238;QD=36.87;ReadPosRankSum=0.570;VQSLOD=5.3074;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,135,1606	1/1:0,4:4:12.04:168,12,0	0/0:21,0:21:51.10:0,51,581	0/0:22,0:22:45.37:0,45,505	1/1:1,20:21:51.17:714,51,0	1/1:3,19:22:57.19:798,57,0	1/1:1,17:18:42.14:588,42,0	1/1:2,20:22:60.20:838,60,0	0/0:14,0:14:42.13:0,42,504	0/0:13,0:13:39.11:0,39,459	0/0:19,0:19:51.16:0,51,611	1/1:1,18:19:54.18:753,54,0	1/1:1,17:18:48.16:672,48,0	1/1:2,17:19:45.15:630,45,0	0/0:17,0:17:42.13:0,42,504	0/0:13,0:13:33.10:0,33,396	0/0:34,0:34:99:0,102,1210	0/0:24,0:24:72.22:0,72,864	0/0:16,0:16:45.14:0,45,540	0/0:19,0:19:51.16:0,51,612	0/0:46,0:46:99:0,123,1476	1/1:0,18:18:51.17:714,51,0	1/1:0,24:24:63.21:881,63,0	1/1:1,35:36:93.31:1303,93,0	1/1:0,21:21:57.19:798,57,0	1/1:2,24:26:69.12:928,69,0	1/1:0,25:25:72.24:1007,72,0	1/1:0,2:2:6.02:84,6,0
chr10	24193965	.	AT	A	4892.55	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-1.489;DP=461;FS=6.631;HRun=5;HaplotypeScore=53.5962;InbreedingCoeff=0.9644;MQ=67.56;MQ0=0;MQRankSum=0.445;QD=30.20;ReadPosRankSum=1.652;VQSLOD=5.3514;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:51.17:0,51,697	0/0:8,0:8:24.08:0,24,328	0/0:3,0:3:6.02:0,6,82	0/0:5,0:5:15.05:0,15,205	0/0:31,0:31:84.27:0,84,1132	0/0:17,0:17:48.15:0,48,640	0/0:5,0:5:15.05:0,15,205	0/0:34,0:34:93.29:0,93,1242	1/1:1,19:20:48.14:544,48,0	1/1:1,26:27:78.22:885,78,0	1/1:1,20:21:54.15:613,54,0	0/0:9,0:9:24.08:0,24,324	0/0:19,0:19:51.17:0,51,697	0/0:20,0:20:60.19:0,60,805	0/0:15,0:15:42.14:0,42,575	0/0:14,1:15:8.10:0,8,500	1/1:1,19:20:54.15:613,54,0	1/1:0,17:17:42.12:476,42,0	1/1:0,18:18:54.15:605,54,0	1/1:0,22:22:57.16:647,57,0	1/1:0,17:17:45.13:511,45,0	0/0:10,0:10:27.07:0,27,351	0/0:14,0:14:39.12:0,39,519	0/0:10,0:10:30.10:0,30,410	0/0:25,0:25:69.23:0,69,943	0/0:20,0:20:51.17:0,51,698	0/0:13,0:12:36.12:0,36,490	0/0:9,0:9:21.54:0,22,288
chr10	24194971	.	ATG	A	701.49	PASS	AB=0.983;AC=19;AF=0.339;AN=56;BaseQRankSum=1.292;DP=521;FS=36.319;HRun=0;HaplotypeScore=120.3552;InbreedingCoeff=-0.3080;MQ=66.86;MQ0=0;MQRankSum=0.463;QD=1.99;ReadPosRankSum=5.212;VQSLOD=0.4747;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:15:25.90:0,26,306	0/1:5,0:5:6.17:6,0,16	0/0:10,0:8:6.87:0,7,99	0/0:9,0:9:8.24:0,8,132	0/1:34,3:37:72.07:158,0,72	0/1:26,0:26:53.73:78,0,54	0/1:20,0:20:13.08:54,0,13	0/1:31,0:31:12.48:12,0,252	0/0:23,0:23:5.68:0,6,90	0/1:29,1:30:25.81:26,0,181	0/1:14,0:14:16.86:17,0,81	0/1:17,0:17:15.81:31,0,16	0/1:17,0:17:31.49:35,0,31	0/1:17,0:17:21:21,0,98	0/0:25,0:26:67.93:0,68,474	0/0:20,0:20:14.95:0,15,110	0/0:14,1:15:11.48:0,11,104	0/0:14,0:14:15.02:0,15,75	0/0:17,0:17:4.02:0,4,111	0/0:19,0:19:2.44:0,2,89	0/1:10,1:11:39.52:40,0,72	0/1:18,1:18:51.27:51,0,121	0/1:21,1:22:28.24:28,0,79	1/1:7,0:7:13.53:46,14,0	0/1:16,0:16:0.53:50,0,1	0/1:21,0:21:42.35:42,0,64	0/1:35,0:34:2.87:147,0,3	0/1:7,0:7:14.93:15,0,25
chr10	24194973	.	GTT	G	8017.03	PASS	AB=0.691;AC=46;AF=0.821;AN=56;BaseQRankSum=-4.717;DP=547;FS=3.130;HRun=13;HaplotypeScore=101.0634;InbreedingCoeff=0.7090;MQ=64.16;MQ0=0;MQRankSum=-0.344;QD=16.50;ReadPosRankSum=5.995;VQSLOD=4.0951;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:34.67:0,35,286	1/1:1,5:6:9.01:87,9,0	0/0:8,0:6:5.50:0,5,37	0/0:7,0:7:8.92:0,9,82	1/1:9,31:42:47.28:738,47,0	1/1:6,22:28:59.07:563,59,0	1/1:2,17:19:51.07:495,51,0	1/1:11,21:34:47.25:476,47,0	1/1:21,2:23:57.58:394,58,0	1/1:23,7:31:58.01:462,58,0	0/1:14,4:18:0.03:129,0,0	1/1:1,15:18:32.70:346,33,0	1/1:2,12:16:38.53:344,39,0	1/1:4,10:16:15.69:252,16,0	0/0:8,1:27:22.34:0,22,187	1/1:17,3:21:34.90:263,35,0	1/1:15,1:16:33.24:184,33,0	1/1:12,1:14:25.50:179,26,0	1/1:14,5:19:20.81:230,21,0	1/1:18,4:22:12.56:244,13,0	1/1:9,3:12:12.20:107,12,0	0/1:5,15:21:50.15:222,0,50	1/1:7,16:23:32.44:369,32,0	1/1:0,7:7:21.03:204,21,0	1/1:1,13:16:19.54:365,20,0	1/1:3,18:22:47.67:448,48,0	1/1:4,31:34:59.23:810,59,0	1/1:1,4:6:5.95:108,6,0
chr10	24194984	.	T	TG	2586.56	PASS	AB=0.624;AC=13;AF=0.232;AN=56;BaseQRankSum=8.122;DP=577;FS=1.240;HRun=0;HaplotypeScore=113.9326;InbreedingCoeff=0.3952;MQ=72.46;MQ0=0;MQRankSum=-2.252;QD=14.70;ReadPosRankSum=2.536;VQSLOD=4.9306;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:20.60:0,21,111	0/0:6,0:6:11.59:0,12,71	0/0:14,0:11:16.96:0,17,172	0/0:13,0:13:11.93:0,12,123	0/0:43,0:44:99:0,114,652	0/0:33,0:32:81.86:0,82,510	0/0:18,0:18:49.26:0,49,268	0/0:35,0:35:94.13:0,94,657	1/1:5,17:22:29.73:545,30,0	0/1:9,21:30:39.31:370,0,39	1/1:4,14:18:11.12:239,11,0	0/0:19,0:19:43.74:0,44,258	0/0:18,0:18:49.61:0,50,302	0/0:17,0:17:43.93:0,44,278	0/0:28,0:28:75.42:0,75,548	0/1:6,17:23:9.75:363,0,10	1/1:3,11:14:2.60:299,3,0	1/1:2,12:14:2.13:295,2,0	0/1:10,10:20:18.73:213,0,19	0/1:10,15:25:18.54:319,0,19	0/1:5,5:10:27.56:104,0,28	0/0:24,0:23:58.89:0,59,407	0/0:20,0:20:52.36:0,52,313	0/0:9,0:9:23.20:0,23,133	0/0:17,0:17:49.43:0,49,298	0/0:30,0:30:85.35:0,85,593	0/0:33,0:32:80.81:0,81,477	0/0:5,0:5:14.57:0,15,83
chr10	24194986	.	T	TGCA	6149.87	PASS	AB=0.917;AC=19;AF=0.339;AN=56;BaseQRankSum=-4.704;DP=587;FS=1.762;HRun=0;HaplotypeScore=128.0797;InbreedingCoeff=0.8546;MQ=73.51;MQ0=0;MQRankSum=-3.845;QD=32.37;ReadPosRankSum=0.976;VQSLOD=5.2073;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,7:19:9.03:173,9,0	0/0:6,0:6:6.01:0,6,75	0/0:12,0:10:9.43:0,9,313	0/0:15,0:16:9.26:0,9,157	0/0:44,0:44:81.65:0,82,945	0/0:34,0:33:72.17:0,72,865	0/0:18,0:18:45.10:0,45,484	0/0:36,0:36:87.19:0,87,1061	1/1:21,0:21:54.18:901,54,0	1/1:26,1:27:51.17:875,51,0	1/1:16,0:16:39.12:641,39,0	0/0:21,0:21:48.11:0,48,519	0/0:21,0:21:57.12:0,57,631	0/0:18,0:18:39.09:0,39,443	0/0:29,0:29:72.20:0,72,846	1/1:22,1:23:4.46:673,4,0	1/1:13,1:14:30.10:464,30,0	1/1:13,0:13:30.10:479,30,0	1/1:19,3:22:45.14:792,45,0	1/1:21,1:24:54.17:913,54,0	0/1:10,1:11:25.13:239,0,25	0/0:24,0:24:60.12:0,60,694	0/0:20,0:20:36.08:0,36,407	0/0:9,0:9:18.04:0,18,211	0/0:17,0:17:36.09:0,36,401	0/0:31,0:31:69.19:0,69,869	0/0:35,0:34:96.20:0,96,1006	0/0:5,0:5:15.02:0,15,149
chr10	24196397	.	G	GA	6319.93	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=-10.414;DP=641;FS=0.327;HRun=8;HaplotypeScore=68.0144;InbreedingCoeff=0.9163;MQ=77.19;MQ0=0;MQRankSum=-3.976;QD=25.59;ReadPosRankSum=0.926;VQSLOD=5.5548;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,27:31:69.21:796,69,0	0/0:13,0:13:39.02:0,39,357	0/0:20,0:20:41.95:0,42,369	0/1:20,0:20:13.42:13,0,224	0/0:28,0:28:72.03:0,72,659	0/0:26,0:26:63.03:0,63,577	0/0:21,0:21:57.01:0,57,517	0/0:31,0:31:78.03:0,78,711	1/1:1,19:21:60.01:672,60,0	1/1:1,23:23:69.18:776,69,0	1/1:3,17:20:42.08:470,42,0	0/0:23,0:23:60.01:0,60,545	0/0:21,0:21:48.02:0,48,439	0/0:33,0:33:87.03:0,87,792	0/0:19,0:19:50.98:0,51,454	1/1:4,23:27:60.17:684,60,0	1/1:4,19:23:54.16:623,54,0	1/1:0,5:5:15.04:173,15,0	1/1:3,12:15:36.11:416,36,0	1/1:6,35:41:96.28:1107,96,0	1/1:2,18:20:51.15:589,51,0	0/0:24,0:24:60.03:0,60,549	0/0:30,0:30:69.03:0,69,631	0/0:21,0:21:57.03:0,57,522	0/0:22,0:22:57.02:0,57,522	0/0:21,0:21:60.03:0,60,549	0/0:38,0:37:96.05:0,96,878	0/0:3,0:3:9:0,9,82
chr10	24196594	.	GGTT	G	4245.54	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=7.802;DP=656;FS=4.879;HRun=0;HaplotypeScore=90.0499;InbreedingCoeff=0.9275;MQ=62.11;MQ0=3;MQRankSum=0.977;QD=18.38;ReadPosRankSum=2.880;VQSLOD=4.3501;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:30:74.97:0,75,1057	0/0:12,0:12:18.01:0,18,262	0/0:31,0:22:18.66:0,19,437	0/1:44,0:35:2.98:3,0,628	0/0:29,0:29:62.52:0,63,764	0/0:24,0:24:56.74:0,57,772	0/0:16,0:16:36.01:0,36,653	0/0:26,0:26:62.96:0,63,934	1/1:2,12:14:24.08:356,24,0	1/1:18,5:22:53.96:581,54,0	1/1:3,13:16:15.05:222,15,0	0/0:23,0:23:66.20:0,66,1262	0/0:27,0:27:69.17:0,69,1335	0/0:25,0:25:66.19:0,66,1228	0/0:21,0:21:57.08:0,57,951	1/1:3,25:28:51.17:756,51,0	1/1:2,18:21:38.73:578,39,0	1/1:0,13:13:30.10:445,30,0	1/1:10,12:22:38.84:415,39,0	1/1:2,14:16:9.03:133,9,0	1/1:6,27:33:51.17:756,51,0	0/0:20,0:20:47.73:0,48,528	0/0:25,0:24:56.69:0,57,711	0/0:18,0:18:42.14:0,42,852	0/0:20,0:20:53.90:0,54,821	0/0:36,0:36:38.01:0,38,1013	0/0:34,0:34:86.95:0,87,1538	0/0:7,0:7:12.02:0,12,176
chr10	24196702	.	TA	T	411.35	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=4.778;DP=550;FS=7.769;HRun=1;HaplotypeScore=60.0638;InbreedingCoeff=0.6429;MQ=73.68;MQ0=0;MQRankSum=0.179;QD=15.82;ReadPosRankSum=-0.930;VQSLOD=2.7517;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:54.18:0,54,861	0/0:10,0:10:24.08:0,24,381	0/0:18,0:17:43.16:0,43,648	0/1:14,0:14:13.29:13,0,403	0/0:23,0:23:54.16:0,54,834	0/0:22,0:22:66.23:0,66,1048	0/0:23,0:23:69.24:0,69,1101	0/0:30,0:30:90.30:0,90,1416	0/0:17,0:17:45.15:0,45,707	0/0:26,0:26:75.21:0,75,1151	0/0:15,0:15:36.11:0,36,548	0/0:19,0:19:54.10:0,54,804	0/0:13,0:13:36.12:0,36,574	0/0:24,0:24:66.22:0,66,1030	1/1:0,12:12:36.12:502,36,0	0/0:19,0:19:45.15:0,45,717	0/0:16,0:16:42.14:0,42,666	0/0:5,0:5:12.04:0,12,191	0/0:17,0:17:51.16:0,51,770	0/0:37,0:37:84.28:0,84,1339	0/0:20,0:20:57.19:0,57,896	0/0:22,0:22:66.23:0,66,1053	0/0:15,0:15:36.11:0,36,545	0/0:17,0:17:45.15:0,45,703	0/0:23,0:23:63.21:0,63,1005	0/0:27,0:27:78.26:0,78,1223	0/0:35,0:35:93.28:0,93,1430	0/0:10,0:10:30.09:0,30,455
chr10	24196764	.	TG	T	347.96	PASS	AC=14;AF=0.700;AN=20;BaseQRankSum=-0.955;DP=83;FS=11.461;HRun=1;HaplotypeScore=10.2626;InbreedingCoeff=0.5505;MQ=122.35;MQ0=10;MQRankSum=-4.282;QD=16.57;ReadPosRankSum=-4.183;VQSLOD=0.9746;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,0:2:5.99:48,6,0	./.	0/0:14,0:11:33.11:0,33,518	0/0:20,0:13:33.06:0,33,514	./.	./.	1/1:2,2:3:3.01:41,3,0	1/1:0,5:5:15.04:189,15,0	./.	./.	./.	./.	./.	0/0:3,0:3:3.01:0,3,35	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	1/1:1,0:1:3.01:41,3,0	1/1:2,0:2:2.99:24,3,0	1/1:4,1:5:6.01:66,6,0	1/1:1,0:1:3.01:40,3,0
chr10	24203330	.	AG	A	455.64	PASS	AB=1.000;AC=35;AF=0.833;AN=42;BaseQRankSum=-1.223;DP=79;FS=1.255;HRun=1;HaplotypeScore=21.6547;InbreedingCoeff=0.4072;MQ=93.47;MQ0=14;MQRankSum=-2.224;QD=9.11;ReadPosRankSum=-3.314;VQSLOD=-0.0919;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:12,0:10:19.20:0,19,190	0/0:8,0:6:17.87:0,18,155	1/1:1,0:1:2.96:19,3,0	1/1:4,0:4:5.80:33,6,0	1/1:3,0:2:2.96:19,3,0	0/0:4,0:3:2.94:0,3,18	1/1:1,0:1:2.96:19,3,0	1/1:4,0:3:8.84:57,9,0	./.	./.	1/1:1,2:3:6.39:39,6,0	./.	1/1:1,0:1:2.96:19,3,0	1/1:1,2:3:8.87:57,9,0	./.	0/1:2,0:1:0:0,0,0	1/1:1,1:1:2.99:23,3,0	1/1:4,0:4:2.92:17,3,0	1/1:0,3:3:5.92:39,6,0	1/1:1,0:1:2.94:18,3,0	1/1:5,0:5:14.77:95,15,0	1/1:3,0:3:8.04:33,8,0	1/1:3,0:2:5.89:37,6,0	1/1:3,0:2:5.88:36,6,0	1/1:4,0:2:2.90:16,3,0	./.
chr10	24203333	.	A	AT	7004.50	PASS	AB=1.000;AC=50;AF=0.893;AN=56;BaseQRankSum=-1.768;DP=297;FS=24.860;HRun=0;HaplotypeScore=228.5621;InbreedingCoeff=0.4960;MQ=57.49;MQ0=12;MQRankSum=-3.765;QD=25.38;ReadPosRankSum=1.936;VQSLOD=1.7111;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,0:8:4:128,4,0	1/1:7,0:7:18.04:221,18,0	0/0:12,0:10:9.44:0,9,285	0/0:9,0:7:21.01:0,21,253	1/1:14,0:14:29:356,29,0	1/1:15,0:15:6.72:237,7,0	1/1:11,0:10:23.44:274,23,0	0/1:11,0:10:16.88:213,0,17	1/1:10,0:10:22.71:328,23,0	1/1:13,0:12:29.38:399,29,0	1/1:8,0:8:21.05:241,21,0	1/1:11,0:11:22.66:285,23,0	1/1:9,1:10:24.48:279,24,0	1/1:10,0:9:18.94:228,19,0	1/1:11,0:11:20.08:291,20,0	1/1:13,0:13:33.99:425,34,0	1/1:4,0:3:5.98:58,6,0	1/1:6,0:5:9.03:112,9,0	0/1:8,0:8:2.34:212,0,2	1/1:11,4:15:30.03:401,30,0	1/1:7,0:7:10.95:126,11,0	1/1:10,0:10:18.13:179,18,0	1/1:16,0:16:24.59:475,25,0	1/1:3,3:6:18:189,18,0	1/1:15,2:16:37.18:459,37,0	1/1:14,0:13:39.06:453,39,0	1/1:16,1:15:36.28:394,36,0	1/1:2,0:2:3.01:40,3,0
chr10	24204008	.	CT	C	2675.56	PASS	AB=0.883;AC=20;AF=0.357;AN=56;BaseQRankSum=9.468;DP=464;FS=1.312;HRun=10;HaplotypeScore=47.8471;InbreedingCoeff=0.8721;MQ=76.55;MQ0=0;MQRankSum=0.859;QD=15.65;ReadPosRankSum=2.465;VQSLOD=3.7480;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:8:15.03:0,15,157	0/0:11,0:11:30.08:0,30,332	0/1:10,1:12:6.89:7,0,107	0/0:8,0:8:14.87:0,15,143	0/0:23,0:23:63.16:0,63,689	0/0:26,2:28:34.11:0,34,604	0/0:10,0:10:27.07:0,27,298	0/0:27,0:27:63.15:0,63,687	1/1:1,4:5:12:104,12,0	1/1:3,17:20:28.76:418,29,0	1/1:3,16:19:47.98:417,48,0	0/0:18,0:18:48.12:0,48,525	0/0:17,2:19:22.06:0,22,462	0/0:9,0:9:24.04:0,24,254	0/1:18,2:20:0.97:1,0,447	1/1:1,11:12:29.01:240,29,0	1/1:2,19:21:47.99:417,48,0	1/1:1,14:15:38.99:339,39,0	1/1:5,18:23:53.98:469,54,0	1/1:6,14:20:44.01:371,44,0	1/1:0,4:4:12:104,12,0	0/0:9,0:9:24.06:0,24,266	0/0:22,0:23:65.30:0,65,656	0/0:5,0:5:15.04:0,15,166	0/0:23,1:24:28.09:0,28,538	0/0:26,1:27:28.08:0,28,532	0/0:25,0:25:66.11:0,66,698	0/0:19,0:19:39.11:0,39,431
chr10	24204531	.	C	CT	2944.52	PASS	AB=0.630;AC=19;AF=0.339;AN=56;BaseQRankSum=10.998;DP=731;FS=6.746;HRun=11;HaplotypeScore=94.8689;InbreedingCoeff=0.9050;MQ=71.22;MQ0=2;MQRankSum=0.864;QD=11.37;ReadPosRankSum=-2.117;VQSLOD=2.7054;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,1:38:54.19:0,54,581	0/0:8,0:8:17.93:0,18,139	0/0:25,0:18:22.79:0,23,156	0/0:16,0:11:11.68:0,12,97	0/0:31,3:34:25.64:0,26,556	0/0:31,0:31:83.67:0,84,650	0/0:17,1:18:11.37:0,11,263	0/0:39,0:41:66.20:0,66,498	1/1:5,2:23:39.18:305,39,0	1/1:4,1:25:37.97:300,38,0	1/1:5,2:35:75.33:439,75,0	0/0:28,0:29:58.70:0,59,442	0/0:29,1:31:43.28:0,43,505	0/0:26,0:26:32.30:0,32,392	1/1:9,20:30:67.20:652,67,0	1/1:3,0:17:31.63:157,32,0	1/1:6,1:35:51.08:352,51,0	1/1:9,0:24:11.65:176,12,0	0/1:6,1:17:15.19:122,0,15	1/1:2,1:33:80.87:465,81,0	1/1:3,1:18:34.36:191,34,0	0/0:25,0:25:68.70:0,69,531	0/0:28,0:28:62.72:0,63,487	0/0:17,0:17:44.80:0,45,348	0/0:18,0:19:39.20:0,39,288	0/0:33,1:36:34.83:0,35,517	0/0:35,0:40:87.71:0,88,660	0/0:10,0:10:23.89:0,24,186
chr10	24205016	.	C	CT	10953.97	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-15.921;DP=623;FS=2.625;HRun=7;HaplotypeScore=54.9292;InbreedingCoeff=0.9776;MQ=78.85;MQ0=0;MQRankSum=1.109;QD=31.21;ReadPosRankSum=0.102;VQSLOD=4.8588;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:63.10:0,63,608	1/1:1,11:12:33.10:399,33,0	0/0:21,0:21:47.95:0,48,431	0/0:13,0:13:9.21:0,9,197	1/1:4,32:36:93.29:1124,93,0	1/1:4,33:38:96.29:1159,96,0	1/1:0,15:15:36.11:435,36,0	1/1:3,34:37:99:1218,102,0	0/0:13,0:13:39.06:0,39,377	0/0:32,0:32:90.14:0,90,864	0/0:24,0:24:60.09:0,60,579	1/1:1,13:14:39.11:463,39,0	1/1:2,26:29:72.09:848,72,0	1/1:6,25:31:69.17:817,69,0	0/0:21,0:21:51.07:0,51,492	0/0:25,0:25:69.11:0,69,666	0/0:20,0:20:60.10:0,60,579	0/0:13,0:13:30.02:0,30,283	0/0:14,0:14:42.04:0,42,395	0/0:39,0:39:99:0,99,956	0/0:13,0:13:39.05:0,39,370	1/1:1,25:26:69.17:817,69,0	1/1:0,17:17:51.16:616,51,0	1/1:0,9:9:27.08:326,27,0	1/1:0,24:24:66.20:797,66,0	1/1:6,28:34:32.31:957,32,0	1/1:0,27:26:75.23:906,75,0	1/1:0,2:2:6.02:72,6,0
chr10	24206088	.	G	GT	1131.28	PASS	AB=0.817;AC=19;AF=0.339;AN=56;BaseQRankSum=-4.043;DP=424;FS=1.910;HRun=14;HaplotypeScore=78.9176;InbreedingCoeff=0.1675;MQ=75.06;MQ0=3;MQRankSum=1.009;QD=4.81;ReadPosRankSum=-4.172;VQSLOD=1.1607;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:2,0:11:18.27:0,18,52	0/0:9,0:9:8.75:0,9,58	0/1:28,0:14:2.12:2,0,6	0/1:13,0:8:10.92:11,0,25	0/0:15,1:19:1.20:0,1,118	0/0:27,0:27:30.46:0,30,195	0/0:4,0:4:5.85:0,6,38	0/1:18,0:19:1.74:2,0,109	0/1:6,9:15:14.53:134,0,15	1/1:11,6:19:23.79:188,24,0	0/1:7,12:19:11.07:170,0,11	0/0:13,0:13:0.16:0,0,111	0/0:15,0:16:22.60:0,23,139	0/0:14,0:15:25.31:0,25,151	0/0:4,0:20:28.49:0,28,81	1/1:2,6:9:14.87:120,15,0	1/1:1,11:13:20.95:177,21,0	0/1:2,2:4:10.27:44,0,10	0/1:9,11:22:3.59:215,0,4	1/1:5,14:19:22.09:165,22,0	0/1:6,2:11:22.96:41,0,23	0/1:6,1:8:14.58:15,0,45	0/0:16,0:16:23.92:0,24,152	0/0:7,0:7:14.69:0,15,96	0/0:15,0:16:28.43:0,28,176	0/1:18,0:18:8.09:8,0,78	0/1:15,3:18:9.29:9,0,78	0/0:15,0:16:16.50:0,17,102
chr10	24206366	.	C	CTT	7469.74	PASS	AB=0.646;AC=48;AF=0.857;AN=56;BaseQRankSum=-2.827;DP=425;FS=0.000;HRun=11;HaplotypeScore=64.9305;InbreedingCoeff=0.1486;MQ=70.31;MQ0=0;MQRankSum=-0.270;QD=17.79;ReadPosRankSum=2.173;VQSLOD=3.5686;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:5,0:12:11.12:34,0,11	1/1:3,3:7:17.52:190,18,0	0/0:4,0:3:5.71:0,6,33	0/1:10,0:9:0.68:1,0,33	1/1:4,11:18:21.02:563,21,0	1/1:1,5:6:15.05:217,15,0	0/1:1,10:11:5.02:280,0,5	1/1:9,21:38:80.17:876,80,0	0/1:3,0:11:34.72:37,0,35	1/1:4,1:18:30.95:152,31,0	1/1:7,0:20:37.27:159,37,0	0/1:2,6:10:5.54:231,0,6	1/1:6,13:21:53.15:708,53,0	1/1:3,6:11:8.43:214,8,0	1/1:4,2:17:7.02:146,7,0	1/1:3,0:17:1.35:65,1,0	0/1:4,0:14:5.65:57,0,6	1/1:2,0:21:18.21:82,18,0	1/1:3,3:25:33.83:272,34,0	1/1:5,0:20:9.34:108,9,0	1/1:1,0:4:7.49:26,7,0	1/1:3,3:8:14.54:182,15,0	1/1:8,16:28:68.61:914,69,0	1/1:0,3:3:6.02:87,6,0	1/1:3,10:15:39.33:479,39,0	1/1:3,12:16:12.50:480,13,0	1/1:2,19:24:26.56:648,27,0	1/1:7,5:15:23.05:263,23,0
chr10	24206465	.	G	GA	9340.40	PASS	AB=1.000;AC=34;AF=0.607;AN=56;BaseQRankSum=-15.742;DP=430;FS=0.777;HRun=3;HaplotypeScore=65.3899;InbreedingCoeff=0.7048;MQ=75.55;MQ0=0;MQRankSum=-1.387;QD=31.24;ReadPosRankSum=-0.364;VQSLOD=4.5428;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:36.11:0,36,431	1/1:1,8:9:24.08:336,24,0	0/0:8,0:8:18.04:0,18,195	0/0:12,0:12:16.75:0,17,268	1/1:2,33:35:99:1352,102,0	1/1:1,19:20:57.19:790,57,0	1/1:0,14:14:39.13:546,39,0	1/1:0,21:21:63.15:824,63,0	0/1:7,0:7:31.05:33,0,31	0/0:12,0:12:23.69:0,24,73	0/0:25,0:25:32.93:0,33,204	1/1:0,14:14:39.13:546,39,0	1/1:1,17:18:45.15:630,45,0	1/1:0,16:16:45.15:629,45,0	0/0:21,0:21:47.19:0,47,186	0/1:20,0:20:8.22:8,0,96	0/0:16,0:16:13.65:0,14,118	0/0:8,0:8:21.48:0,21,91	0/1:19,0:19:56.82:69,0,57	0/0:17,0:17:38.72:0,39,175	0/1:5,0:5:11.77:12,0,40	1/1:1,7:8:18.06:252,18,0	1/1:0,13:13:36.12:495,36,0	1/1:1,6:7:15.05:210,15,0	1/1:4,19:23:48.16:672,48,0	1/1:2,23:25:36.25:930,36,0	1/1:0,18:18:51.17:713,51,0	1/1:0,7:7:21.07:294,21,0
chr10	24207189	.	TA	T	3949.67	PASS	AB=0.707;AC=45;AF=0.804;AN=56;BaseQRankSum=1.383;DP=406;FS=1.695;HRun=14;HaplotypeScore=48.6354;InbreedingCoeff=-0.0010;MQ=55.45;MQ0=20;MQRankSum=1.753;QD=10.10;ReadPosRankSum=0.195;VQSLOD=2.7922;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:9,0:16:18.76:19,0,30	1/1:3,4:7:13.68:88,14,0	0/1:3,2:3:15.42:32,0,15	0/1:6,0:5:10.61:21,0,11	0/1:7,6:13:5.06:106,0,5	0/1:7,14:23:5.69:244,0,6	1/1:6,5:9:14.80:103,15,0	1/1:15,14:29:41.43:286,41,0	1/1:1,8:9:23.78:163,24,0	1/1:7,14:21:18.26:261,18,0	0/1:6,12:19:3.45:208,0,3	1/1:10,6:16:25.50:168,25,0	1/1:3,7:9:11.86:82,12,0	1/1:3,5:8:17.82:122,18,0	0/0:15,0:14:24.03:0,24,223	1/1:3,11:14:1.89:157,2,0	1/1:6,12:17:12.07:202,12,0	0/1:10,1:6:14.58:15,0,22	1/1:10,14:25:20.20:267,20,0	1/1:9,16:25:27.11:324,27,0	0/1:5,4:7:40.79:47,0,41	1/1:3,7:10:13.15:100,13,0	1/1:5,4:8:11.84:82,12,0	0/1:7,7:10:8.84:121,0,9	1/1:5,11:15:19.41:227,19,0	1/1:8,15:22:19.68:278,20,0	1/1:3,8:12:18.82:124,19,0	1/1:2,5:5:14.88:103,15,0
chr10	24208654	.	C	CAAA	306.43	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=2.745;DP=595;FS=0.000;HRun=9;HaplotypeScore=102.6074;InbreedingCoeff=0.6987;MQ=71.52;MQ0=0;MQRankSum=-2.228;QD=11.79;ReadPosRankSum=-1.052;VQSLOD=0.3162;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,7:12:24.03:399,24,0	0/0:10,0:10:27.06:0,27,325	0/0:16,0:16:14.82:0,15,255	0/1:14,0:12:4.28:4,0,126	0/0:34,0:35:99:0,99,1189	0/0:26,0:27:78.18:0,78,965	0/0:12,0:12:33.10:0,33,417	0/0:33,0:34:64.24:0,64,1014	0/0:18,0:18:51.16:0,51,644	0/0:29,0:29:75.22:0,75,937	0/0:22,0:23:55.72:0,56,702	0/0:17,0:17:45.13:0,45,559	0/0:30,0:30:72.21:0,72,909	0/0:26,0:26:75.22:0,75,946	0/0:26,0:26:66.15:0,66,834	0/0:16,0:16:45.14:0,45,568	0/0:15,0:15:36.08:0,36,446	0/0:19,0:21:59.99:0,60,687	0/0:18,0:18:39.08:0,39,481	0/0:34,0:34:93.25:0,93,1160	0/0:6,0:6:15.04:0,15,190	0/0:20,0:21:60.12:0,60,737	0/0:24,0:25:64.77:0,65,831	0/0:18,0:18:48.13:0,48,606	0/0:22,0:23:57.10:0,57,700	0/0:27,0:27:60.10:0,60,746	0/0:33,0:33:96.31:0,96,1212	0/0:9,0:9:27.09:0,27,341
chr10	24209850	.	C	CATAT	4735.08	PASS	AB=0.800;AC=24;AF=0.500;AN=48;BaseQRankSum=-6.526;DP=331;FS=2.639;HRun=0;HaplotypeScore=67.3628;InbreedingCoeff=0.7314;MQ=62.36;MQ0=8;MQRankSum=-1.689;QD=26.75;ReadPosRankSum=-1.072;VQSLOD=4.2985;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:29:69.22:0,69,1095	1/1:2,4:6:9.02:177,9,0	0/0:7,0:4:2.99:0,3,49	./.	1/1:6,7:14:8.82:162,9,0	1/1:3,13:19:32.85:691,33,0	./.	1/1:14,21:37:68.61:1409,69,0	0/0:5,0:5:9.03:0,9,105	0/1:18,0:18:5.49:5,0,267	0/0:12,0:12:14.71:0,15,153	1/1:5,3:9:11.78:237,12,0	1/1:3,5:9:8.77:161,9,0	1/1:3,2:5:3.01:75,3,0	0/0:12,0:13:23.35:0,23,515	0/0:9,0:9:24.07:0,24,278	0/0:18,0:18:28.68:0,29,344	0/0:8,0:8:13.77:0,14,176	0/0:18,0:14:5.79:0,6,240	0/0:13,0:13:26.25:0,26,321	0/0:5,0:5:9.02:0,9,99	./.	1/1:5,4:9:8.94:224,9,0	./.	1/1:5,11:18:17.80:378,18,0	0/1:3,6:9:3.79:368,0,4	1/1:4,6:13:20.77:392,21,0	1/1:4,6:9:20.56:457,21,0
chr10	24209907	.	ATG	A	3710.06	PASS	AB=0.853;AC=20;AF=0.357;AN=56;BaseQRankSum=9.208;DP=452;FS=0.460;HRun=0;HaplotypeScore=71.9608;InbreedingCoeff=0.6972;MQ=65.29;MQ0=4;MQRankSum=-0.583;QD=19.84;ReadPosRankSum=4.846;VQSLOD=3.2173;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:59.86:0,60,936	0/0:5,0:5:11.83:0,12,199	0/0:32,0:18:35.73:0,36,512	0/0:25,0:15:25.47:0,25,384	0/0:14,0:14:7.08:0,7,308	0/0:22,0:22:44.70:0,45,654	0/0:7,0:7:15.01:0,15,194	0/0:43,1:44:64.45:0,64,1466	1/1:1,10:11:21.07:265,21,0	1/1:1,21:21:60.13:702,60,0	1/1:0,16:15:45.14:567,45,0	0/0:11,0:11:23.87:0,24,390	0/0:12,0:12:36.07:0,36,518	0/0:11,0:11:30.09:0,30,470	0/0:20,0:20:54.18:0,54,891	1/1:1,11:12:27.09:340,27,0	1/1:4,13:17:24.08:302,24,0	0/1:4,5:9:23.03:136,0,23	1/1:6,11:17:30.10:378,30,0	1/1:1,22:23:54.17:681,54,0	1/1:1,11:12:24.08:302,24,0	0/0:6,0:6:18.05:0,18,269	0/0:15,0:15:39.12:0,39,604	0/0:8,0:8:15.03:0,15,222	0/1:16,1:17:1.71:2,0,512	0/1:10,1:11:13.76:14,0,325	0/1:18,2:20:20.70:21,0,704	0/0:8,0:8:21.07:0,21,349
chr10	24211604	.	C	CTT	8267.41	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-5.569;DP=600;FS=12.566;HRun=10;HaplotypeScore=76.9692;InbreedingCoeff=0.9760;MQ=73.73;MQ0=0;MQRankSum=-0.152;QD=26.00;ReadPosRankSum=-2.536;VQSLOD=2.7451;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:45:99:0,114,1132	1/1:3,6:10:14.27:188,14,0	0/0:17,0:18:4.87:0,5,151	0/0:8,0:7:14.39:0,14,125	1/1:3,8:21:56.51:578,57,0	1/1:5,22:27:60.20:895,60,0	1/1:4,11:18:35.59:452,36,0	1/1:8,20:29:63.03:768,63,0	0/0:16,0:16:39.02:0,39,385	0/0:22,0:22:48.06:0,48,488	0/0:24,0:24:60.09:0,60,609	1/1:5,15:20:30.07:424,30,0	1/1:5,15:25:25.74:307,26,0	1/1:2,27:29:66.14:935,66,0	0/0:29,0:29:66.08:0,66,665	0/0:26,0:26:75.15:0,75,763	0/0:21,0:21:54.04:0,54,540	0/0:17,0:18:47.80:0,48,461	0/0:20,0:22:26.43:0,26,367	0/0:20,0:21:59.86:0,60,591	0/0:12,0:12:30.06:0,30,305	1/1:0,12:13:30.10:425,30,0	1/1:4,17:22:35.60:485,36,0	1/1:2,15:18:21.07:313,21,0	1/1:2,17:20:42.14:610,42,0	1/1:4,19:25:53.37:680,53,0	1/1:1,23:25:62.80:868,63,0	1/1:4,7:15:29.50:341,30,0
chr10	24213965	.	G	GA	14719.49	PASS	AB=0.533;AC=49;AF=0.875;AN=56;BaseQRankSum=-4.015;DP=609;FS=2.759;HRun=8;HaplotypeScore=69.6425;InbreedingCoeff=0.8535;MQ=75.67;MQ0=0;MQRankSum=-3.700;QD=26.67;ReadPosRankSum=2.610;VQSLOD=5.7491;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,28:29:71.02:802,71,0	0/1:1,7:8:5.08:123,0,5	0/0:16,0:16:22.24:0,22,268	0/0:13,0:10:20.97:0,21,183	1/1:1,28:29:75.13:827,75,0	1/1:2,22:24:57.17:658,57,0	1/1:3,18:21:45.13:519,45,0	1/1:9,22:31:66.16:748,66,0	1/1:3,19:22:51.15:589,51,0	1/1:4,10:14:32.77:356,33,0	1/1:4,16:20:48.14:554,48,0	1/1:2,17:19:45.13:515,45,0	1/1:5,15:20:36.10:416,36,0	1/1:4,32:36:78.23:900,78,0	0/0:28,0:28:78.04:0,78,714	1/1:3,28:31:81.24:934,81,0	1/1:1,26:27:75.22:865,75,0	1/1:4,12:16:33.10:380,33,0	1/1:4,12:16:11.61:355,12,0	1/1:6,17:23:45.13:519,45,0	1/1:1,7:8:21.06:242,21,0	1/1:1,17:18:39.11:447,39,0	1/1:3,23:26:66.20:761,66,0	1/1:1,20:21:60.18:692,60,0	1/1:4,20:24:48.14:554,48,0	1/1:2,28:30:84.22:944,84,0	1/1:1,29:31:75.22:861,75,0	1/1:1,6:7:14.99:157,15,0
chr10	24216476	.	C	CAG	1908.31	PASS	AB=0.815;AC=18;AF=0.333;AN=54;BaseQRankSum=1.275;DP=619;FS=28.225;HRun=0;HaplotypeScore=172.6662;InbreedingCoeff=0.7337;MQ=53.52;MQ0=9;MQRankSum=1.386;QD=11.43;ReadPosRankSum=0.618;VQSLOD=1.9080;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:41:45.06:0,45,529	./.	0/0:11,0:5:11.75:0,12,98	0/0:33,0:19:7.69:0,8,158	0/0:18,0:17:15.03:0,15,173	0/0:21,0:19:11.86:0,12,126	0/0:24,0:22:24.04:0,24,267	0/0:24,0:21:30.09:0,30,371	1/1:4,15:19:21.07:346,21,0	1/1:12,4:14:21.53:325,22,0	1/1:8,2:8:3.01:50,3,0	0/0:31,0:28:31.37:0,31,406	0/0:24,0:23:36.11:0,36,445	0/0:34,0:33:42.11:0,42,501	0/0:49,0:48:99:0,114,1391	1/1:12,7:18:21.07:314,21,0	1/1:15,7:20:17.42:351,17,0	0/1:2,2:4:9.12:44,0,9	1/1:10,3:10:9:121,9,0	1/1:8,7:15:9.03:148,9,0	1/1:17,6:23:23.64:389,24,0	0/0:24,0:22:9.03:0,9,112	0/0:20,0:19:9.03:0,9,112	0/0:25,0:21:17.92:0,18,225	0/0:24,0:21:15.01:0,15,149	0/1:25,1:23:12.71:13,0,553	0/0:33,0:32:48.15:0,48,591	0/0:2,0:2:6.02:0,6,75
chr10	24216498	.	GAC	G	72.69	PASS	AB=0.948;AC=7;AF=0.125;AN=56;BaseQRankSum=4.617;DP=579;FS=10.455;HRun=0;HaplotypeScore=146.6270;InbreedingCoeff=-0.0240;MQ=37.50;MQ0=40;MQRankSum=-4.308;QD=0.54;ReadPosRankSum=0.497;VQSLOD=2.0048;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:34:36.01:0,36,567	1/1:7,0:5:0.47:1,0,0	0/0:20,0:3:2.87:0,3,15	0/1:41,1:13:17.77:18,0,181	0/0:17,4:19:5.91:0,6,65	0/0:20,1:16:5.91:0,6,41	0/0:15,1:12:14.23:0,14,126	0/0:19,0:7:20.99:0,21,211	0/0:17,0:16:18.96:0,19,151	0/0:9,0:8:19.32:0,19,220	0/0:11,0:4:2.98:0,3,22	0/1:27,2:27:40.26:40,0,127	0/1:20,2:20:8.46:8,0,171	0/0:24,1:23:8.82:0,9,182	0/0:47,0:45:99:0,120,2135	0/0:16,0:16:18.02:0,18,227	0/0:22,1:19:12.31:0,12,85	0/1:6,0:6:4.33:11,0,4	0/0:14,0:7:15.48:0,15,182	0/0:11,0:10:4.23:0,4,73	0/0:15,0:14:17.92:0,18,159	0/0:19,3:20:3:0,3,25	0/0:17,3:16:5.97:0,6,50	0/0:25,1:22:12.81:0,13,69	0/0:18,2:14:5.96:0,6,75	0/1:25,2:24:99:104,0,404	0/0:26,1:26:8.04:0,8,240	0/0:5,0:3:1.58:0,2,21
chr10	24216508	.	GAC	G	1327.21	PASS	AB=0.907;AC=34;AF=0.654;AN=52;BaseQRankSum=7.088;DP=527;FS=9.455;HRun=0;HaplotypeScore=122.3350;InbreedingCoeff=0.1762;MQ=30.41;MQ0=47;MQRankSum=-2.694;QD=3.23;ReadPosRankSum=0.248;VQSLOD=2.0522;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:29:2.40:0,2,132	1/1:6,2:5:0.47:1,0,0	0/1:22,0:2:0.82:1,0,38	0/1:42,0:11:9.94:10,0,170	1/1:13,6:16:2.97:20,3,0	0/1:17,5:16:0:0,0,0	1/1:10,2:9:3:28,3,0	0/1:17,0:3:19.88:20,0,46	1/1:12,0:12:4.12:18,4,0	0/0:5,0:4:8.88:0,9,81	./.	1/1:19,6:25:23.56:233,24,0	1/1:19,5:22:20.78:181,21,0	1/1:14,8:20:17.97:184,18,0	0/0:44,0:42:99:0,120,2096	0/1:10,0:13:16.27:16,0,27	0/1:16,2:15:17.70:18,0,20	1/1:6,0:6:2.84:14,3,0	0/1:11,0:5:11.05:11,0,29	0/1:10,0:9:0.02:0,0,0	0/0:7,0:5:5.88:0,6,36	./.	1/1:17,4:17:3:25,3,0	1/1:17,9:22:9.03:124,9,0	0/1:15,4:13:0:0,0,0	0/1:20,3:19:58.38:259,0,58	1/1:17,7:24:26.75:246,27,0	1/1:5,1:3:6:63,6,0
chr10	24216530	.	GAGAGAGAC	G	242.01	PASS	AB=0.985;AC=12;AF=0.273;AN=44;BaseQRankSum=3.168;DP=618;FS=0.000;HRun=0;HaplotypeScore=142.6375;InbreedingCoeff=-0.0199;MQ=25.86;MQ0=73;MQRankSum=0.268;QD=1.06;ReadPosRankSum=0.459;VQSLOD=2.4552;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:22:0:0,0,0	1/1:11,0:9:3.23:17,3,0	0/0:15,0:2:3.01:0,3,38	0/0:26,0:7:2.04:0,2,6	./.	0/0:31,0:19:5.50:0,6,40	0/1:24,0:13:0.01:0,0,0	0/0:31,0:12:30.23:0,30,255	./.	0/0:10,0:7:8.63:0,9,341	./.	0/1:25,0:24:85.20:85,0,184	0/1:27,1:22:53.04:108,0,53	0/1:26,0:23:36:61,0,36	0/0:39,0:35:51.17:0,51,1536	0/0:16,0:13:2.91:0,3,34	0/1:21,0:12:44.73:45,0,88	0/1:16,0:13:10.78:11,0,288	1/1:14,0:5:0.63:3,1,0	0/0:11,1:10:1.24:0,1,3	0/0:11,0:7:12.04:0,12,155	./.	./.	./.	0/0:24,2:18:3.01:0,3,40	0/1:31,1:23:25.02:25,0,682	0/0:26,0:23:11.89:0,12,206	0/0:7,0:4:3.01:0,3,70
chr10	24216544	.	GAC	G	90.80	PASS	AB=0.981;AC=10;AF=0.208;AN=48;BaseQRankSum=4.171;DP=699;FS=0.000;HRun=0;HaplotypeScore=119.2944;InbreedingCoeff=-0.0918;MQ=24.13;MQ0=75;MQRankSum=-0.435;QD=0.43;ReadPosRankSum=-2.754;VQSLOD=0.9647;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,1:21:0:0,0,0	0/1:14,0:11:3.99:4,0,81	0/0:7,0:2:2.98:0,3,22	0/0:9,0:2:3.40:0,3,17	0/1:29,0:20:0:0,0,0	0/0:32,0:20:5.50:0,6,54	0/0:24,0:12:2.81:0,3,18	0/0:42,0:22:58.28:0,58,725	1/1:11,2:8:2.37:8,2,0	0/0:18,0:13:8.11:0,8,299	./.	0/1:33,0:27:20.82:21,0,230	0/1:33,0:24:23.04:23,0,78	0/1:29,0:25:12.31:12,0,35	0/0:36,1:31:60.16:0,60,1032	0/1:23,3:21:43.07:52,0,43	0/0:28,2:13:1.16:0,1,93	0/1:19,1:12:64.72:65,0,197	0/1:16,0:7:20.69:21,0,22	0/0:12,0:11:1.25:0,1,3	0/0:17,0:10:12.04:0,12,212	./.	./.	./.	0/0:32,0:22:3.01:0,3,57	0/0:38,0:27:29.73:0,30,903	0/0:29,0:25:4.45:0,4,275	0/0:12,0:7:5.89:0,6,73
chr10	24216554	.	GAC	G	280.13	PASS	AB=0.934;AC=11;AF=0.239;AN=46;BaseQRankSum=3.204;DP=741;FS=0.000;HRun=0;HaplotypeScore=112.5150;InbreedingCoeff=-0.0762;MQ=23.70;MQ0=84;MQRankSum=-1.969;QD=1.11;ReadPosRankSum=-3.532;VQSLOD=0.9095;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,1:27:0:0,0,0	0/1:14,0:11:3.95:4,0,97	./.	0/0:2,0:1:0:0,0,0	0/1:32,1:22:0:0,0,0	0/0:30,1:19:5.50:0,6,58	0/0:28,0:12:2.88:0,3,47	0/0:46,0:24:41.68:0,42,801	1/1:14,2:9:5.14:45,5,0	0/1:21,2:15:70.47:70,0,355	./.	0/0:30,1:25:3.12:0,3,260	0/1:37,1:29:7.74:8,0,113	0/0:26,1:22:5.93:0,6,47	0/0:34,1:28:59.32:0,59,996	0/1:26,5:25:40.99:41,0,43	0/1:31,3:15:34.17:34,0,150	0/1:18,3:13:86.31:86,0,180	0/1:13,2:6:22.86:104,0,23	0/0:12,2:13:1.25:0,1,3	0/0:16,4:10:12.04:0,12,219	./.	./.	./.	0/0:33,0:24:3.01:0,3,57	0/0:36,1:27:5.57:0,6,936	0/1:28,0:24:3.59:4,0,300	0/0:11,1:7:5.95:0,6,75
chr10	24216562	.	GAC	G	121.79	PASS	AB=0.962;AC=9;AF=0.205;AN=44;BaseQRankSum=3.822;DP=804;FS=1.168;HRun=0;HaplotypeScore=114.8083;InbreedingCoeff=0.0482;MQ=23.40;MQ0=98;MQRankSum=-0.900;QD=0.58;ReadPosRankSum=-1.435;VQSLOD=2.1722;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,2:32:0.46:0,0,1	0/1:13,0:10:3.92:4,0,92	./.	./.	0/1:37,1:25:0:0,0,0	0/0:36,0:21:5.50:0,6,55	0/0:32,0:12:2.85:0,3,47	0/0:57,0:24:47.45:0,47,860	1/1:14,4:9:5.44:71,5,0	0/1:24,2:18:96.87:97,0,421	./.	0/0:34,0:28:16.76:0,17,244	0/0:38,0:28:10.21:0,10,103	0/1:28,1:22:6.20:6,0,48	0/0:40,0:32:51.12:0,51,986	0/1:30,4:25:29.35:29,0,46	0/1:34,1:15:6.99:7,0,159	0/0:22,0:14:5.69:0,6,196	0/1:17,0:6:16.42:19,0,16	0/0:14,1:13:1.20:0,1,3	0/0:21,1:10:12.04:0,12,201	./.	./.	./.	0/0:31,2:24:3.01:0,3,57	0/0:42,0:28:65.77:0,66,1022	0/0:30,1:26:21.98:0,22,338	0/0:13,0:8:6.01:0,6,83
chr10	24216570	.	GAGAC	G	84.04	PASS	AB=0.979;AC=13;AF=0.295;AN=44;BaseQRankSum=3.744;DP=857;FS=1.168;HRun=0;HaplotypeScore=119.8626;InbreedingCoeff=0.1478;MQ=22.65;MQ0=112;MQRankSum=-0.667;QD=0.25;ReadPosRankSum=-1.686;VQSLOD=2.0283;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:40,1:34:0.12:0,0,0	0/1:16,0:11:1.06:1,0,63	./.	./.	0/1:42,0:27:0:0,0,0	0/1:38,0:21:1.25:1,0,13	0/0:35,0:11:2.45:0,2,37	0/0:67,0:21:46.96:0,47,825	1/1:20,0:11:10.67:73,11,0	0/1:28,0:18:64.73:65,0,478	./.	0/1:33,0:27:21.66:22,0,221	0/0:38,0:28:7.33:0,7,171	1/1:31,0:23:2.54:12,3,0	0/0:41,0:31:60.20:0,60,1444	0/1:37,0:26:10.61:11,0,68	0/0:35,0:15:14.18:0,14,265	0/0:22,0:14:22.41:0,22,374	0/0:18,0:6:7.38:0,7,34	0/1:12,3:13:0.01:0,0,0	0/0:25,0:11:11.77:0,12,72	./.	./.	./.	0/0:33,0:23:3.01:0,3,80	0/0:48,0:30:49.80:0,50,1021	0/1:34,0:26:15.32:15,0,284	0/0:13,0:8:6.02:0,6,91
chr10	24216578	.	GAGAGAC	G	546.43	PASS	AB=0.965;AC=17;AF=0.386;AN=44;BaseQRankSum=2.195;DP=893;FS=3.964;HRun=0;HaplotypeScore=123.2046;InbreedingCoeff=0.1380;MQ=22.42;MQ0=124;MQRankSum=-1.853;QD=1.26;ReadPosRankSum=-0.377;VQSLOD=2.3490;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:43,0:36:0.01:0,0,0	0/0:15,1:11:5.50:0,5,24	./.	./.	0/1:41,0:26:0:0,0,0	1/1:40,1:23:0.89:2,1,0	0/1:37,0:12:0.05:0,0,0	0/0:71,0:18:27.45:0,27,296	1/1:21,3:14:11.88:144,12,0	0/1:29,3:19:99:232,0,407	./.	0/1:35,0:28:59.60:60,0,109	0/0:39,0:29:4.26:0,4,93	1/1:32,0:24:0.60:40,1,0	0/0:43,0:34:69.15:0,69,1752	0/1:32,5:25:31.56:59,0,32	0/0:33,1:15:12.68:0,13,248	0/0:23,0:15:23.94:0,24,389	0/1:20,1:6:36.18:58,0,36	0/1:17,1:16:0.05:0,0,0	0/1:27,0:13:0:0,0,0	./.	./.	./.	0/0:30,0:21:3.01:0,3,76	0/0:49,0:29:37.61:0,38,586	0/1:30,3:25:66.25:66,0,170	0/1:13,0:8:0.63:1,0,3
chr10	24216582	.	GAC	G	614.80	PASS	AB=0.963;AC=19;AF=0.432;AN=44;BaseQRankSum=3.736;DP=887;FS=34.143;HRun=0;HaplotypeScore=111.0851;InbreedingCoeff=0.0429;MQ=22.54;MQ0=122;MQRankSum=-4.909;QD=1.18;ReadPosRankSum=3.558;VQSLOD=0.2261;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:35:0.35:0,0,0	0/1:16,0:12:14:14,0,33	./.	./.	0/1:39,1:25:0:0,0,0	1/1:41,0:23:2.68:11,3,0	0/1:36,0:11:0.02:0,0,0	0/1:68,0:17:17.33:17,0,148	1/1:24,0:14:11.05:76,11,0	0/1:31,1:19:99:110,0,289	./.	0/0:34,0:27:11.38:0,11,126	0/1:35,3:29:3.23:93,0,3	1/1:32,0:24:2.58:12,3,0	0/0:48,0:39:72.08:0,72,1193	0/1:34,2:25:9.39:9,0,45	0/0:33,0:14:14.04:0,14,167	0/0:22,1:15:23.94:0,24,304	0/1:21,2:6:6.20:90,0,6	1/1:19,0:17:2.50:20,3,0	0/1:25,4:14:0:0,0,0	./.	./.	./.	0/0:27,1:20:3.01:0,3,57	0/1:49,0:28:99:161,0,182	0/1:34,1:26:19.22:127,0,19	0/0:12,0:8:5.48:0,5,32
chr10	24216584	.	CAG	C	1045.90	PASS	AB=0.858;AC=20;AF=0.476;AN=42;BaseQRankSum=3.488;DP=891;FS=29.178;HRun=0;HaplotypeScore=109.1024;InbreedingCoeff=-0.0777;MQ=22.50;MQ0=123;MQRankSum=-3.562;QD=1.88;ReadPosRankSum=3.414;VQSLOD=0.4562;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:33,11:37:0.01:0,0,0	0/1:11,3:11:17.16:33,0,17	./.	./.	./.	0/1:29,6:23:0.04:0,0,0	0/1:31,5:11:0.02:0,0,0	0/1:65,2:14:41.79:79,0,42	1/1:16,7:14:8.35:64,8,0	0/1:31,4:19:99:161,0,263	./.	0/1:23,6:26:11.21:11,0,61	1/1:18,12:28:0.18:95,0,0	1/1:16,10:24:1.01:11,1,0	0/0:47,1:40:69.21:0,69,1106	0/1:28,8:25:4.73:5,0,30	0/0:30,2:14:5.77:0,6,107	0/0:21,2:15:15.20:0,15,198	0/1:23,0:6:24.77:43,0,25	1/1:13,6:17:2.03:6,2,0	0/1:29,1:15:0:0,0,0	./.	./.	./.	0/0:17,11:21:2.86:0,3,51	0/1:35,12:28:99:444,0,111	0/1:20,11:25:29.70:210,0,30	0/0:11,1:8:4.83:0,5,52
chr10	24216588	.	G	GAGAC	407.61	PASS	AB=0.995;AC=19;AF=0.452;AN=42;BaseQRankSum=2.754;DP=912;FS=11.505;HRun=0;HaplotypeScore=119.8572;InbreedingCoeff=-0.1629;MQ=22.20;MQ0=136;MQRankSum=-2.317;QD=0.87;ReadPosRankSum=1.823;VQSLOD=1.9009;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,3:38:0.89:0,1,3	0/1:17,0:12:7.88:8,0,22	./.	./.	./.	1/1:39,0:22:0.51:1,1,0	0/1:35,0:11:0.08:0,0,0	0/0:73,0:13:17.19:0,17,100	0/1:21,0:14:10.17:61,0,10	0/1:36,0:19:51.43:51,0,360	./.	0/1:38,0:28:58.65:86,0,59	0/1:36,1:27:41.89:42,0,88	1/1:31,0:22:5.78:68,6,0	0/0:49,0:40:69.21:0,69,1236	0/1:36,0:25:13.52:42,0,14	0/0:32,0:13:11.24:0,11,174	0/0:24,0:14:20.90:0,21,290	0/1:23,0:7:34.24:34,0,117	1/1:20,0:18:0.43:1,0,0	1/1:29,0:15:0.47:1,0,0	./.	./.	./.	0/0:34,0:25:3.01:0,3,57	0/1:53,0:29:43.13:43,0,352	0/1:35,0:25:83.60:84,0,247	0/1:12,0:8:3.81:4,0,24
chr10	24216590	.	G	GAC	100.18	PASS	AB=0.919;AC=12;AF=0.286;AN=42;BaseQRankSum=3.212;DP=918;FS=1.378;HRun=0;HaplotypeScore=114.3940;InbreedingCoeff=0.0619;MQ=22.07;MQ0=142;MQRankSum=-1.609;QD=0.36;ReadPosRankSum=1.595;VQSLOD=2.3298;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:44,0:38:2.82:17,3,0	0/1:15,2:12:12.12:51,0,12	./.	./.	./.	0/0:36,2:22:0.88:0,1,2	0/1:32,0:10:0.04:0,0,1	0/0:74,0:10:26.05:0,26,159	0/1:24,0:15:13.04:13,0,36	0/0:36,0:19:5.60:0,6,352	./.	0/1:31,1:27:35.78:36,0,78	0/0:33,2:27:0.09:0,0,81	1/1:28,0:22:0.20:1,0,0	0/0:50,0:40:72.20:0,72,1034	0/0:38,0:25:3.48:0,3,45	0/0:31,0:13:12.03:0,12,163	0/0:24,0:14:16.96:0,17,242	0/0:22,0:7:12.01:0,12,120	0/0:20,1:18:2.85:0,3,18	1/1:29,0:16:0.47:1,0,0	./.	./.	./.	0/0:30,3:25:2.96:0,3,45	0/1:49,1:27:46.70:47,0,307	0/0:32,1:24:17.83:0,18,193	0/1:6,3:8:7.08:43,0,7
chr10	24216594	.	GAC	G	663.95	PASS	AB=0.984;AC=19;AF=0.452;AN=42;BaseQRankSum=3.792;DP=919;FS=7.804;HRun=0;HaplotypeScore=108.1151;InbreedingCoeff=-0.1408;MQ=21.91;MQ0=141;MQRankSum=-3.935;QD=1.28;ReadPosRankSum=1.399;VQSLOD=1.5900;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:44,0:36:2.82:17,3,0	0/1:15,0:11:15.36:15,0,28	./.	./.	./.	1/1:40,0:24:2.68:11,3,0	0/1:30,1:9:0.02:0,0,0	0/1:85,0:10:4.43:4,0,126	0/1:22,2:15:8.52:77,0,9	0/1:37,0:20:99:102,0,237	./.	0/1:36,0:25:19.15:19,0,24	1/1:37,0:27:10.84:87,11,0	0/0:29,0:22:0.77:0,1,15	0/0:48,0:38:72.22:0,72,1292	0/0:37,0:24:5.15:0,5,25	0/1:31,0:13:10.89:11,0,79	0/0:23,0:13:17.31:0,17,210	0/1:21,0:7:32.97:71,0,33	1/1:24,0:19:2.50:21,2,0	0/0:28,1:15:0.47:0,0,1	./.	./.	./.	0/0:31,1:24:2.86:0,3,54	0/1:49,2:29:99:217,0,193	0/1:30,1:22:49.74:135,0,50	0/1:13,0:8:1.47:1,0,23
chr10	24216596	.	CAG	C	158.59	PASS	AB=0.978;AC=17;AF=0.405;AN=42;BaseQRankSum=2.813;DP=927;FS=2.566;HRun=0;HaplotypeScore=110.7186;InbreedingCoeff=0.0417;MQ=21.85;MQ0=143;MQRankSum=-0.909;QD=0.36;ReadPosRankSum=1.369;VQSLOD=2.1746;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:44,1:37:0:0,0,0	0/0:15,0:11:0.48:0,0,33	./.	./.	./.	1/1:39,0:23:0.89:2,1,0	0/1:30,0:9:0.02:0,0,0	0/0:88,0:11:23.53:0,24,265	0/1:23,1:15:32.90:33,0,33	0/1:37,1:20:25.05:25,0,219	./.	1/1:36,0:25:4.61:19,5,0	1/1:35,1:26:10.66:74,11,0	0/0:29,0:22:5.38:0,5,42	0/0:50,0:40:69.22:0,69,1151	0/0:36,1:25:2.95:0,3,22	0/1:29,2:13:34.64:35,0,44	0/0:23,0:13:14.08:0,14,181	0/1:19,0:6:28.18:28,0,79	1/1:23,1:19:1.24:3,1,0	0/1:29,1:15:0:0,0,0	./.	./.	./.	0/0:32,0:24:2.85:0,3,38	0/1:50,1:28:30.12:30,0,363	0/1:32,0:23:29.41:29,0,124	0/0:11,0:7:5.48:0,5,31
chr10	24216602	.	GAGAC	G	144.75	PASS	AB=0.997;AC=13;AF=0.310;AN=42;BaseQRankSum=4.218;DP=943;FS=2.549;HRun=0;HaplotypeScore=118.8695;InbreedingCoeff=0.0477;MQ=21.76;MQ0=152;MQRankSum=-1.009;QD=0.42;ReadPosRankSum=-1.822;VQSLOD=1.6105;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:44,1:36:3.32:18,3,0	0/0:15,0:11:0.60:0,1,12	./.	./.	./.	1/1:38,1:23:2.04:7,2,0	0/1:28,0:7:0.17:0,0,0	0/0:91,1:9:27.04:0,27,399	0/1:27,0:15:31.22:31,0,55	0/1:40,1:20:36.62:37,0,419	./.	1/1:35,0:24:8.23:90,8,0	0/1:36,0:26:0.92:1,0,88	0/0:27,0:20:1.97:0,2,24	0/0:52,0:41:72.20:0,72,1698	0/0:40,0:26:1.74:0,2,26	0/0:32,0:13:5.01:0,5,54	0/1:23,0:12:1.19:1,0,144	0/1:21,0:6:20.07:20,0,97	0/0:26,0:19:2.77:0,3,14	0/0:31,0:14:0.47:0,0,1	./.	./.	./.	0/0:29,0:21:3.01:0,3,38	0/1:51,0:29:53.09:53,0,465	0/0:33,0:23:12.22:0,12,318	0/0:16,0:8:3.26:0,3,23
chr10	24216606	.	CAG	C	57.79	PASS	AB=0.931;AC=10;AF=0.238;AN=42;BaseQRankSum=3.592;DP=951;FS=0.000;HRun=0;HaplotypeScore=117.5496;InbreedingCoeff=-0.0325;MQ=21.75;MQ0=153;MQRankSum=-1.778;QD=0.19;ReadPosRankSum=-0.388;VQSLOD=2.0009;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,7:37:3.87:0,4,34	0/0:15,1:12:2.84:0,3,18	./.	./.	./.	1/1:35,1:21:0.83:2,1,0	0/1:28,0:7:0.02:0,0,0	0/0:92,0:9:27.09:0,27,422	0/1:27,2:17:30.36:30,0,85	0/0:42,2:23:32.13:0,32,442	./.	0/0:35,0:24:5.51:0,6,29	0/1:28,6:25:31.76:65,0,32	0/0:24,5:22:3.01:0,3,50	0/0:51,0:39:63.22:0,63,1085	0/0:38,1:26:2.97:0,3,50	0/0:32,1:13:1.08:0,1,17	0/0:22,0:14:6.48:0,6,68	0/1:20,2:7:3.45:3,0,96	0/0:26,1:20:2.83:0,3,19	0/1:27,2:15:0:0,0,0	./.	./.	./.	0/1:26,3:21:0:0,0,0	0/1:52,1:30:43.89:44,0,376	0/1:29,2:20:9.98:10,0,288	0/0:15,0:8:6:0,6,62
chr10	24216612	.	GAGAC	G	371.28	PASS	AB=0.936;AC=11;AF=0.262;AN=42;BaseQRankSum=2.694;DP=929;FS=7.277;HRun=0;HaplotypeScore=117.3898;InbreedingCoeff=-0.1051;MQ=21.96;MQ0=156;MQRankSum=-2.707;QD=1.18;ReadPosRankSum=-0.688;VQSLOD=1.7825;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:37:5.45:0,5,33	0/1:12,1:9:30.80:31,0,34	./.	./.	./.	1/1:35,1:20:0.89:3,1,0	0/1:25,0:5:0:0,0,0	0/0:85,0:9:27.01:0,27,507	0/1:28,0:17:49.17:49,0,107	0/0:43,0:20:37.45:0,37,588	./.	0/1:30,3:22:17.46:19,0,17	0/1:27,5:23:3.91:4,0,154	0/0:21,3:18:3.01:0,3,44	0/0:58,0:46:75.22:0,75,1795	0/0:40,1:27:5.88:0,6,79	0/0:31,0:11:2.46:0,2,52	0/0:23,0:12:19.77:0,20,163	0/1:34,1:10:32.02:32,0,265	0/0:25,2:20:5.82:0,6,54	0/0:30,1:13:0.47:0,0,1	./.	./.	./.	0/1:26,3:21:0:0,0,0	0/1:44,6:29:99:314,0,641	0/1:32,2:22:27.93:28,0,437	0/0:14,0:7:2.84:0,3,57
chr10	24216642	.	G	GAC	40.64	PASS	AB=0.934;AC=7;AF=0.175;AN=40;BaseQRankSum=2.446;DP=672;FS=0.000;HRun=0;HaplotypeScore=72.2953;InbreedingCoeff=0.0167;MQ=22.64;MQ0=121;MQRankSum=-2.721;QD=0.29;ReadPosRankSum=0.269;VQSLOD=1.3844;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,1:26:2.95:0,3,45	0/0:11,0:6:3.90:0,4,48	./.	./.	./.	0/0:22,0:14:0.89:0,1,2	0/0:17,0:4:1.25:0,1,3	0/0:50,0:3:8.57:0,9,75	0/1:25,5:19:13.56:23,0,14	0/1:25,1:12:49.54:50,0,140	./.	0/0:21,0:14:7.38:0,7,94	0/0:16,0:12:4.55:0,5,28	0/0:17,0:11:3.01:0,3,45	0/0:67,0:51:75.09:0,75,1113	0/1:26,1:19:12.51:13,0,40	./.	0/0:25,0:16:17.17:0,17,251	0/0:31,0:11:18.01:0,18,238	0/0:18,1:14:2.53:0,3,45	0/1:25,1:12:0.12:0,0,0	./.	./.	./.	1/1:18,0:15:0.47:1,0,0	0/0:34,0:17:29.78:0,30,297	0/0:21,0:10:14.77:0,15,118	0/1:11,1:8:39.80:51,0,40
chr10	24216648	.	GAC	G	50.01	PASS	AB=0.926;AC=9;AF=0.214;AN=42;BaseQRankSum=2.221;DP=554;FS=0.000;HRun=0;HaplotypeScore=56.7512;InbreedingCoeff=0.0767;MQ=23.29;MQ0=103;MQRankSum=-2.314;QD=0.36;ReadPosRankSum=-1.785;VQSLOD=1.1739;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:27,1:18:9.97:10,0,52	0/0:8,2:5:3.01:0,3,58	./.	./.	./.	1/1:12,4:10:2.37:8,2,0	0/0:14,2:4:1.25:0,1,3	0/0:36,0:1:3:0,3,25	0/0:25,0:16:2.09:0,2,19	0/1:21,1:10:43.59:44,0,70	./.	0/0:15,1:10:5.75:0,6,114	0/1:8,3:8:1.45:1,0,10	0/0:14,2:9:3.01:0,3,53	0/0:61,1:49:56.36:0,56,1283	0/0:21,2:16:2.86:0,3,57	1/1:13,1:8:2.94:18,3,0	0/0:23,0:15:29.66:0,30,343	0/0:24,0:9:14.79:0,15,242	0/0:21,0:16:2.99:0,3,58	0/1:24,0:11:0:0,0,0	./.	./.	./.	0/0:8,4:10:0:0,0,0	0/1:21,2:12:69.96:70,0,178	0/0:13,3:6:3.01:0,3,57	0/0:11,0:7:3.48:0,3,58
chr10	24216698	.	GAC	G	79.73	PASS	AB=0.969;AC=10;AF=0.333;AN=30;BaseQRankSum=2.367;DP=546;FS=11.322;HRun=0;HaplotypeScore=56.5861;InbreedingCoeff=-0.2417;MQ=20.88;MQ0=121;MQRankSum=-3.235;QD=0.40;ReadPosRankSum=-0.941;VQSLOD=-0.1610;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/0:10,0:5:2.86:0,3,19	./.	./.	./.	0/0:13,0:6:0.47:0,0,1	./.	./.	1/1:19,0:11:0.87:2,1,0	0/1:17,1:9:23.24:23,0,99	./.	0/0:10,0:5:5.90:0,6,37	./.	0/0:18,0:10:3.01:0,3,44	0/0:65,0:47:35.97:0,36,643	0/1:23,0:16:0:0,0,0	0/0:27,0:14:2.93:0,3,57	0/1:38,1:22:25.15:25,0,161	0/1:27,1:9:22.89:23,0,67	0/1:16,2:14:14.08:39,0,14	./.	./.	./.	./.	./.	0/1:27,1:10:49.36:49,0,136	0/1:11,0:5:0.53:1,0,13	0/1:12,0:9:11.64:12,0,62
chr10	24216728	.	GAC	G	190.57	PASS	AB=0.984;AC=14;AF=0.438;AN=32;BaseQRankSum=0.352;DP=636;FS=2.448;HRun=0;HaplotypeScore=63.0976;InbreedingCoeff=0.1177;MQ=19.78;MQ0=132;MQRankSum=-1.959;QD=0.85;ReadPosRankSum=0.135;VQSLOD=1.2257;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	1/1:13,0:7:2.94:18,3,0	./.	./.	./.	0/0:23,0:9:0.47:0,0,1	./.	./.	1/1:16,0:7:2.94:18,3,0	0/1:23,0:11:46.84:47,0,93	./.	0/0:12,0:4:2.74:0,3,12	./.	0/0:20,0:10:3.01:0,3,36	0/0:63,1:47:10.36:0,10,258	0/1:17,0:7:0:1,0,0	0/1:40,1:14:2.86:3,0,81	0/1:39,0:19:33.39:33,0,76	1/1:19,0:5:6.30:26,6,0	0/0:32,0:20:3.40:0,3,18	0/0:38,0:11:2.77:0,3,17	./.	./.	./.	./.	0/1:23,2:10:3.56:95,0,4	1/1:14,0:6:5.75:54,6,0	0/1:18,0:15:0.43:0,0,109
chr10	24216730	.	CAG	C	77.80	PASS	AB=0.889;AC=11;AF=0.367;AN=30;BaseQRankSum=1.229;DP=649;FS=1.421;HRun=0;HaplotypeScore=64.5430;InbreedingCoeff=0.4099;MQ=19.71;MQ0=136;MQRankSum=-1.369;QD=0.60;ReadPosRankSum=0.503;VQSLOD=1.5774;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	1/1:12,1:7:2.98:21,3,0	./.	./.	./.	0/0:22,1:9:0.47:0,0,1	./.	./.	./.	0/0:24,0:12:7.05:0,7,180	./.	0/0:11,0:4:2.92:0,3,17	./.	0/0:20,0:10:2.98:0,3,21	0/0:64,0:46:20.29:0,20,248	1/1:18,0:7:0.47:1,0,0	0/0:41,1:14:12.22:0,12,115	0/1:35,5:20:21.96:60,0,22	1/1:18,1:5:6.38:37,6,0	0/0:32,1:20:0:0,0,0	0/0:39,0:11:3.01:0,3,32	./.	./.	./.	./.	1/1:26,0:9:8.27:42,8,0	1/1:14,0:6:2.99:23,3,0	0/0:18,0:15:10.10:0,10,122
chr10	24216736	.	G	GAGAC	38.49	PASS	AB=1.000;AC=9;AF=0.281;AN=32;BaseQRankSum=3.603;DP=732;FS=0.000;HRun=0;HaplotypeScore=77.6280;InbreedingCoeff=0.2270;MQ=19.28;MQ0=160;MQRankSum=-1.594;QD=0.23;ReadPosRankSum=-0.628;VQSLOD=1.2479;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	0/0:12,1:8:2.80:0,3,27	./.	./.	./.	1/1:23,0:9:2.19:8,2,0	./.	./.	0/0:15,0:7:0.59:0,1,3	0/0:25,0:12:10.14:0,10,92	./.	0/0:16,0:9:4.62:0,5,19	./.	1/1:19,4:14:3:80,3,0	0/0:67,0:49:22.41:0,22,348	1/1:19,1:7:0.41:1,0,0	0/0:48,0:15:17.19:0,17,153	0/1:40,0:19:8.35:8,0,38	0/1:26,0:6:12.10:34,0,12	0/1:34,0:20:0:0,0,0	0/0:42,0:12:3:0,3,30	./.	./.	./.	./.	0/0:32,0:10:6.69:0,7,49	0/0:17,0:6:1.22:0,1,20	0/0:20,0:15:23.58:0,24,221
chr10	24216798	.	GAC	G	49.80	PASS	AB=0.986;AC=9;AF=0.180;AN=50;BaseQRankSum=1.366;DP=1122;FS=0.000;HRun=0;HaplotypeScore=92.6794;InbreedingCoeff=-0.0025;MQ=19.56;MQ0=227;MQRankSum=-2.047;QD=0.15;ReadPosRankSum=-1.029;VQSLOD=1.4714;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:61,0:28:8.43:0,8,81	0/1:12,0:6:7.16:7,0,21	./.	./.	0/0:62,0:35:1.02:0,1,9	0/0:31,0:10:2.02:0,2,6	0/0:46,1:8:3.01:0,3,57	0/0:91,0:7:18.01:0,18,285	./.	0/1:55,0:30:77.59:78,0,788	0/0:41,0:27:8.55:0,9,71	0/0:30,2:21:7.98:0,8,115	0/0:40,0:23:14.88:0,15,282	0/0:34,0:17:1.72:0,2,50	0/0:73,0:52:35.77:0,36,571	0/0:22,0:8:3.01:0,3,46	0/1:49,1:17:3.11:3,0,165	0/1:45,1:17:18.04:18,0,346	0/0:40,0:8:5.01:0,5,228	0/0:46,0:26:5.78:0,6,109	0/0:59,1:27:3:0,3,57	0/1:32,0:16:0:0,0,0	0/0:36,0:19:5.83:0,6,75	0/1:49,2:21:0:0,0,0	1/1:33,0:18:1.25:3,1,0	0/1:54,1:23:41.83:42,0,463	0/0:31,0:14:9.50:0,10,170	0/0:23,0:16:12.04:0,12,226
chr10	24216800	.	CAG	C	219.55	PASS	AB=0.914;AC=11;AF=0.220;AN=50;BaseQRankSum=1.842;DP=1116;FS=7.537;HRun=0;HaplotypeScore=94.3303;InbreedingCoeff=0.0590;MQ=19.54;MQ0=226;MQRankSum=-1.573;QD=0.53;ReadPosRankSum=-1.859;VQSLOD=0.8923;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:57,3:29:2.79:3,0,44	0/1:12,1:7:28.08:28,0,29	./.	./.	1/1:53,8:35:1.55:4,2,0	0/0:31,0:10:1.61:0,2,5	0/0:46,1:8:3.01:0,3,49	0/0:91,0:7:18.06:0,18,276	./.	0/1:40,13:30:99:239,0,624	0/1:31,11:28:1.97:2,0,44	0/0:30,2:21:8.86:0,9,123	0/0:39,1:23:14.88:0,15,253	0/0:33,0:17:3.01:0,3,51	0/0:68,0:49:29.67:0,30,471	0/0:21,0:8:3.01:0,3,50	0/0:49,1:18:16.10:0,16,187	0/1:43,2:16:3.20:3,0,272	0/0:40,0:8:12.04:0,12,204	0/0:29,17:25:6.02:0,6,98	0/0:56,3:27:3.01:0,3,51	1/1:28,3:16:1.82:5,2,0	0/0:32,4:20:6.02:0,6,86	0/1:52,0:21:0:0,0,0	0/0:30,3:18:0:0,0,0	0/1:51,1:23:40.30:40,0,380	0/0:29,2:15:9.50:0,10,153	0/0:23,0:16:12.04:0,12,191
chr10	24216812	.	CAG	C	84.35	PASS	AB=0.956;AC=5;AF=0.104;AN=48;BaseQRankSum=3.187;DP=1087;FS=9.399;HRun=0;HaplotypeScore=92.6234;InbreedingCoeff=0.1952;MQ=19.72;MQ0=226;MQRankSum=-0.027;QD=0.41;ReadPosRankSum=-0.716;VQSLOD=0.3251;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:55,4:34:28.80:71,0,29	0/0:13,0:7:3.01:0,3,52	./.	./.	1/1:59,1:34:3.01:40,3,0	0/0:31,0:11:2.49:0,2,7	0/0:40,0:7:2.96:0,3,19	0/0:90,0:6:15.05:0,15,192	./.	0/0:43,1:28:36.62:0,37,698	0/1:38,2:25:41.60:71,0,42	0/0:31,0:21:11.21:0,11,121	0/0:40,1:23:17.77:0,18,273	0/0:31,0:15:3.01:0,3,52	0/0:69,2:49:36.12:0,36,599	0/0:28,0:14:5.97:0,6,58	0/0:48,0:17:19.03:0,19,211	0/0:40,1:14:28.34:0,28,334	0/0:42,0:9:15.05:0,15,223	0/0:41,0:24:6.02:0,6,86	0/0:61,0:27:3.01:0,3,36	./.	0/0:35,0:19:6.02:0,6,90	0/1:47,1:21:0:0,0,0	0/0:31,0:16:0:0,0,0	0/0:52,0:23:29.70:0,30,520	0/0:28,0:13:9.50:0,10,156	0/0:26,0:17:8.99:0,9,118
chr10	24216876	.	C	CAG	434	PASS	AB=0.940;AC=11;AF=0.289;AN=38;BaseQRankSum=0.762;DP=860;FS=2.243;HRun=0;HaplotypeScore=94.6917;InbreedingCoeff=0.0170;MQ=20.55;MQ0=184;MQRankSum=-1.961;QD=1.32;ReadPosRankSum=0.506;VQSLOD=1.9263;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:67,4:40:30.21:30,0,101	0/1:12,0:5:0:0,0,0	./.	./.	./.	0/1:20,3:12:23.70:24,0,42	./.	0/1:96,5:7:18.37:240,0,18	0/0:18,0:7:0:0,0,0	0/0:45,0:14:18.65:0,19,308	./.	./.	1/1:22,2:13:2.06:34,2,0	./.	0/0:57,1:46:18.06:0,18,228	0/0:26,2:14:3.56:0,4,54	0/1:18,2:8:23.67:49,0,24	0/1:40,2:18:21.59:22,0,242	0/0:30,0:9:18.03:0,18,201	0/0:24,0:16:5.85:0,6,53	0/0:50,0:20:9.03:0,9,113	1/1:17,4:15:9.03:106,9,0	0/0:24,0:12:1.82:0,2,5	0/0:37,1:23:3.01:0,3,35	./.	0/0:49,0:22:54.15:0,54,660	0/1:13,1:10:26.25:48,0,26	./.
chr10	24216912	.	CAG	C	54.91	PASS	AB=0.965;AC=11;AF=0.250;AN=44;BaseQRankSum=0.766;DP=800;FS=8.535;HRun=0;HaplotypeScore=82.3863;InbreedingCoeff=0.2396;MQ=20.17;MQ0=170;MQRankSum=-2.098;QD=0.28;ReadPosRankSum=-3.231;VQSLOD=-0.2961;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:28:11.84:0,12,125	1/1:17,1:8:0.47:1,0,0	./.	./.	./.	0/1:31,1:14:0.07:0,0,0	0/0:26,2:8:6.02:0,6,100	./.	0/0:21,0:7:0:0,0,0	0/0:35,0:9:23.97:0,24,274	./.	0/0:19,1:8:2.97:0,3,20	0/0:30,0:18:2.11:0,2,32	1/1:17,2:11:5.91:40,6,0	0/0:58,0:46:24.08:0,24,393	0/0:17,0:7:3.01:0,3,37	1/1:31,0:12:2.92:19,3,0	0/0:41,0:17:21.05:0,21,277	0/1:28,1:13:48.74:49,0,346	0/0:17,0:11:3:0,3,26	0/0:44,2:17:3.48:0,3,51	1/1:23,0:13:1.41:3,1,0	0/0:20,1:7:3.01:0,3,39	0/0:45,0:25:12.03:0,12,132	./.	0/1:42,2:17:49.87:50,0,240	0/0:16,0:4:3.01:0,3,38	0/0:19,0:6:3.01:0,3,37
chr10	24216946	.	C	CAG	580.63	PASS	AB=0.930;AC=12;AF=0.231;AN=52;BaseQRankSum=-1.453;DP=1156;FS=37.164;HRun=0;HaplotypeScore=112.4446;InbreedingCoeff=0.0835;MQ=20.76;MQ0=280;MQRankSum=-0.219;QD=1.18;ReadPosRankSum=-1.275;VQSLOD=0.2509;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:55,0:25:4.87:17,5,0	0/1:18,4:10:8.02:8,0,33	./.	./.	0/0:54,6:28:2.89:0,3,39	0/1:38,4:19:0:0,0,0	0/0:45,1:10:3.01:0,3,39	0/1:76,12:17:18.14:495,0,18	0/0:35,0:18:5.95:0,6,74	0/0:39,0:13:16.32:0,16,265	0/0:33,0:18:0.47:0,0,1	0/0:29,2:14:5.93:0,6,73	0/1:35,2:20:0.17:0,0,132	0/0:30,6:24:8.94:0,9,100	0/0:59,0:43:48.14:0,48,600	0/0:19,0:11:2.59:0,3,14	0/1:40,0:20:1.68:2,0,155	0/0:47,0:20:13.56:0,14,258	0/1:38,1:18:23.62:24,0,221	0/0:23,0:14:6.46:0,6,49	1/1:52,1:16:0.27:1,0,0	0/1:29,2:14:0.45:0,0,0	0/0:46,2:17:5.71:0,6,44	0/0:52,2:31:2.92:0,3,8	0/0:37,5:25:18.06:0,18,234	0/1:73,4:33:99:142,0,744	0/0:36,5:22:15.64:0,16,164	0/0:30,1:13:3.01:0,3,39
chr10	24216950	.	GAGAGAC	G	62.71	PASS	AB=0.995;AC=12;AF=0.231;AN=52;BaseQRankSum=1.269;DP=1147;FS=14.801;HRun=0;HaplotypeScore=129.7019;InbreedingCoeff=-0.0282;MQ=21.20;MQ0=277;MQRankSum=-0.183;QD=0.13;ReadPosRankSum=-1.321;VQSLOD=1.8462;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:52,1:27:8.40:0,8,101	0/1:23,0:11:6.43:6,0,47	./.	./.	0/0:62,0:29:6.49:0,6,108	0/0:43,0:19:6.45:0,6,69	0/0:48,1:10:2.47:0,2,59	0/1:87,0:18:35.83:36,0,190	0/0:36,0:17:5.94:0,6,111	0/1:33,1:12:35.42:35,0,361	1/1:33,1:19:0.47:1,0,0	0/0:31,0:14:6.02:0,6,142	0/0:35,1:19:14.56:0,15,268	0/0:37,0:25:11.83:0,12,210	0/0:56,1:41:54.18:0,54,1082	0/0:24,0:11:3.01:0,3,31	0/1:42,0:21:4.30:4,0,255	0/0:42,1:17:31.26:0,31,435	0/1:39,0:17:26.91:27,0,395	0/0:26,0:14:8.93:0,9,166	1/1:57,0:15:3.01:44,3,0	0/1:31,0:14:0.07:0,0,0	0/0:49,0:17:7.84:0,8,99	0/0:55,0:30:5.91:0,6,57	0/0:47,0:25:18.06:0,18,499	0/1:76,1:33:6.72:7,0,1551	0/1:42,0:23:23:23,0,300	0/0:30,0:13:5.51:0,6,111
chr10	24216990	.	GAGAC	G	231.80	PASS	AB=0.996;AC=15;AF=0.300;AN=50;BaseQRankSum=3.746;DP=990;FS=6.744;HRun=0;HaplotypeScore=137.3371;InbreedingCoeff=0.0205;MQ=23.18;MQ0=207;MQRankSum=0.214;QD=0.49;ReadPosRankSum=-4.131;VQSLOD=0.6274;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:32,7:21:5.64:165,6,0	1/1:21,0:10:2.20:18,2,0	./.	./.	0/0:36,0:19:6.49:0,6,150	0/0:38,0:19:12.38:0,12,186	./.	0/0:94,0:23:44.86:0,45,629	0/0:28,0:17:9.42:0,9,228	0/0:39,0:25:40.74:0,41,1164	0/1:38,0:27:9.94:17,0,10	0/0:27,0:15:9.03:0,9,156	0/1:35,0:20:6.70:7,0,75	0/0:32,0:23:7.94:0,8,146	0/0:45,2:37:66.23:0,66,1716	0/0:24,1:14:8.92:0,9,138	0/1:35,0:19:9.36:9,0,267	0/1:31,0:11:64.74:65,0,184	0/1:30,1:16:46.01:46,0,485	0/0:35,0:22:6.11:0,6,233	0/1:43,0:11:0:0,0,0	0/1:28,0:15:0:0,0,0	0/0:31,0:12:3:0,3,81	0/1:41,0:20:0:0,0,0	0/1:48,0:29:19.46:19,0,377	0/1:55,1:30:7.73:8,0,1236	0/0:44,0:28:1.89:0,2,413	0/1:22,0:11:5.27:5,0,74
chr10	24216994	.	CAG	C	471.13	PASS	AB=0.980;AC=17;AF=0.354;AN=48;BaseQRankSum=6.115;DP=942;FS=5.028;HRun=0;HaplotypeScore=121.8516;InbreedingCoeff=-0.2481;MQ=23.39;MQ0=196;MQRankSum=0.925;QD=0.91;ReadPosRankSum=-4.705;VQSLOD=0.3566;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:37,2:21:10.95:64,11,0	1/1:16,3:8:0.89:3,1,0	0/0:1,0:1:2.80:0,3,13	./.	0/0:35,0:18:6.02:0,6,85	0/1:36,0:20:28.25:28,0,65	./.	0/0:89,0:21:27.01:0,27,280	0/0:27,1:17:9.50:0,10,154	0/1:39,0:25:78.09:78,0,737	0/1:36,1:26:6.77:28,0,7	0/0:22,2:14:4.44:0,4,55	0/1:28,3:16:33.39:33,0,45	0/0:32,1:23:8.04:0,8,87	0/0:43,0:35:66.23:0,66,1134	0/1:25,0:14:8.33:8,0,49	0/1:34,1:19:84.52:85,0,152	0/1:29,0:11:88.53:89,0,117	0/1:29,0:15:48.59:49,0,281	0/1:33,1:22:11.42:11,0,126	./.	0/1:25,0:13:0:0,0,0	0/0:30,0:12:3.01:0,3,52	./.	0/1:42,2:27:90.07:90,0,281	0/1:53,0:29:26.25:26,0,802	0/1:41,0:28:16.23:16,0,191	0/0:21,0:10:5.51:0,6,60
chr10	24216996	.	G	GAC	592.46	PASS	AB=0.951;AC=16;AF=0.308;AN=52;BaseQRankSum=6.411;DP=930;FS=3.369;HRun=0;HaplotypeScore=124.2213;InbreedingCoeff=-0.1691;MQ=23.68;MQ0=189;MQRankSum=0.109;QD=1.26;ReadPosRankSum=-3.932;VQSLOD=1.3310;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:22:9.96:0,10,55	1/1:18,0:7:0:0,0,0	0/0:1,0:1:2.80:0,3,13	./.	0/0:33,3:19:5.82:0,6,60	0/1:34,3:21:19.70:20,0,26	./.	0/0:83,0:18:29.91:0,30,346	0/0:28,0:17:9.50:0,10,137	0/1:37,3:26:99:150,0,679	1/1:32,3:26:7.60:49,8,0	0/1:25,0:14:21.60:22,0,37	0/1:30,2:17:7.14:7,0,45	0/0:29,2:21:7.96:0,8,63	0/0:43,1:35:66.22:0,66,1010	0/1:24,1:14:30.97:102,0,31	0/1:34,1:20:88.91:89,0,159	0/0:30,0:11:2.74:0,3,123	0/1:26,0:15:5.04:5,0,328	0/1:34,0:22:10.07:10,0,99	0/0:40,0:9:0:0,0,0	0/1:20,4:12:0.01:0,0,0	0/0:31,1:13:3.01:0,3,42	0/0:39,2:21:0:0,0,0	0/1:39,5:26:99:164,0,244	0/1:51,2:29:26.04:26,0,639	0/1:41,1:28:80.27:80,0,222	0/0:20,1:10:3.90:0,4,48
chr10	24218193	.	AT	A	5394.47	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=11.732;DP=558;FS=4.656;HRun=1;HaplotypeScore=55.1051;InbreedingCoeff=0.9982;MQ=83.97;MQ0=0;MQRankSum=-1.753;QD=39.67;ReadPosRankSum=1.576;VQSLOD=5.4710;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:57.18:0,57,888	0/0:12,0:12:36.11:0,36,552	0/0:16,0:16:48.08:0,48,696	0/0:16,0:16:48.16:0,48,731	0/0:41,0:41:99:0,120,1918	0/0:33,0:33:99:0,99,1559	0/0:15,0:15:45.15:0,45,719	0/0:29,0:29:87.29:0,87,1367	1/1:0,14:14:42.14:587,42,0	1/1:0,17:17:48.16:671,48,0	1/1:0,24:24:63.21:881,63,0	0/0:22,0:22:66.19:0,66,1008	0/0:24,0:24:72.23:0,72,1124	0/0:27,0:27:81.28:0,81,1291	0/0:29,0:29:87.26:0,87,1319	1/1:0,16:16:48.16:671,48,0	1/1:0,12:12:36.12:503,36,0	1/1:0,8:8:24.08:335,24,0	1/1:0,7:7:21.06:277,21,0	1/1:0,28:28:75.25:1049,75,0	1/1:0,10:10:30.10:420,30,0	0/0:17,0:17:51.15:0,51,767	0/0:24,0:24:54.21:0,54,1085	0/0:10,0:10:30.10:0,30,479	0/0:23,0:23:66.22:0,66,1052	0/0:18,0:18:54.18:0,54,863	0/0:40,0:40:99:0,117,1847	0/0:7,0:7:21.07:0,21,336
chr10	24218586	.	ATT	A	9889.98	PASS	AB=0.818;AC=31;AF=0.554;AN=56;BaseQRankSum=-8.689;DP=479;FS=2.217;HRun=8;HaplotypeScore=89.5744;InbreedingCoeff=0.9223;MQ=71.17;MQ0=0;MQRankSum=-1.091;QD=31.20;ReadPosRankSum=1.324;VQSLOD=5.0837;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:1,0:14:24.95:0,25,88	1/1:0,12:12:27.08:329,27,0	0/0:8,0:7:11.56:0,12,127	0/1:7,0:9:13.25:13,0,77	1/1:5,27:32:75.23:915,75,0	1/1:0,15:15:45.14:549,45,0	1/1:0,12:12:33.10:403,33,0	1/1:4,14:18:42.09:486,42,0	0/0:1,0:17:34.48:0,34,120	0/0:3,0:15:29.94:0,30,105	0/0:0,0:11:26.70:0,27,93	1/1:1,17:18:45.13:549,45,0	1/1:0,27:27:75.24:915,75,0	1/1:3,17:20:51.16:622,51,0	0/0:21,0:21:57.19:0,57,940	0/0:0,0:18:37.43:0,37,132	0/0:3,0:12:19.96:0,20,70	0/0:0,0:7:17.81:0,18,66	0/0:3,0:17:35.18:0,35,126	0/0:0,0:14:35.88:0,36,145	0/0:1,0:8:17.47:0,17,61	1/1:1,13:14:36.11:439,36,0	1/1:0,30:30:78.24:951,78,0	1/1:0,13:13:36.11:439,36,0	1/1:0,26:26:69.22:842,69,0	1/1:0,28:28:84.25:1013,84,0	1/1:3,27:30:78.24:951,78,0	1/1:0,13:13:39.12:476,39,0
chr10	24218830	.	AATATATATATATATATGTATATGTGTATATATAT	A	12089.16	PASS	AB=0.625;AC=27;AF=0.643;AN=42;BaseQRankSum=4.797;DP=260;FS=6.544;HRun=0;HaplotypeScore=214.6186;InbreedingCoeff=0.5912;MQ=67.63;MQ0=1;MQRankSum=-4.037;QD=60.15;ReadPosRankSum=5.439;VQSLOD=2.5486;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:2,0:5:53.62:382,0,54	1/1:1,3:4:3.01:261,3,0	./.	./.	1/1:14,16:30:33.09:2622,33,0	1/1:9,6:15:9.03:782,9,0	./.	1/1:24,0:24:12.01:175,12,0	0/0:2,0:2:3.01:0,3,145	./.	./.	1/1:6,4:10:6.02:521,6,0	1/1:8,2:10:3.01:261,3,0	1/1:6,5:11:6.02:520,6,0	0/0:5,0:5:9.03:0,9,827	./.	0/0:10,0:10:24.07:0,24,2134	0/0:4,0:3:6.02:0,6,419	0/0:9,0:9:21.07:0,21,1314	0/0:2,0:2:3.01:0,3,300	0/0:3,0:3:3.01:0,3,143	1/1:1,4:5:6.02:521,6,0	1/1:15,6:21:17.33:1307,17,0	./.	1/1:11,10:21:17.98:1564,18,0	1/1:14,4:18:12.04:828,12,0	1/1:12,10:22:18.06:1564,18,0	1/1:2,3:5:9.03:782,9,0
chr10	24218845	.	ATG	A	1012.92	PASS	AB=0.917;AC=39;AF=0.929;AN=42;BaseQRankSum=3.546;DP=119;FS=3.344;HRun=0;HaplotypeScore=97.0631;InbreedingCoeff=0.1930;MQ=57.46;MQ0=1;MQRankSum=-2.626;QD=9.47;ReadPosRankSum=4.263;VQSLOD=3.4279;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:4:5.68:28,6,0	1/1:3,0:3:2.84:14,3,0	./.	./.	1/1:16,0:16:29.87:141,30,0	1/1:6,0:6:8.52:42,9,0	./.	1/1:2,0:2:0.47:1,0,0	1/1:0,1:1:3.01:45,3,0	./.	./.	1/1:4,0:4:5.68:28,6,0	1/1:2,0:2:2.84:14,3,0	1/1:5,0:5:5.68:28,6,0	0/0:5,0:5:9.03:0,9,173	./.	0/1:10,1:11:16.16:98,0,16	1/1:3,1:3:1.23:66,1,0	1/1:4,3:7:16.92:209,17,0	1/1:2,0:2:2.84:14,3,0	1/1:0,2:2:3.01:45,3,0	1/1:4,0:4:5.68:28,6,0	1/1:7,0:7:8.40:61,8,0	./.	1/1:10,0:10:17.04:84,17,0	1/1:4,0:4:8.44:42,8,0	1/1:10,0:10:17.04:84,17,0	1/1:3,0:3:8.52:42,9,0
chr10	24219311	.	TACA	T	6799.68	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=5.350;DP=606;FS=2.048;HRun=0;HaplotypeScore=151.1574;InbreedingCoeff=0.9831;MQ=73.73;MQ0=0;MQRankSum=-4.925;QD=38.42;ReadPosRankSum=3.381;VQSLOD=6.0143;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:69.24:0,69,1537	0/0:7,0:7:21.07:0,21,468	0/0:15,0:15:42.13:0,42,886	0/0:23,0:23:56.24:0,56,1124	0/0:33,0:33:99:0,99,2168	0/0:24,0:24:72.25:0,72,1608	0/0:11,0:11:33.11:0,33,702	0/0:33,0:33:96.33:0,96,2143	1/1:1,18:19:51.17:832,51,0	1/1:4,22:26:66.23:1077,66,0	1/1:3,19:22:54.18:882,54,0	0/0:27,0:27:81.26:0,81,1730	0/0:26,0:26:66.23:0,66,1473	0/0:27,0:27:78.27:0,78,1737	0/0:33,0:33:96.33:0,96,2144	1/1:2,14:16:36.12:587,36,0	1/1:2,15:16:30.10:490,30,0	1/1:1,3:4:9.03:147,9,0	1/1:4,24:27:66.22:1072,66,0	1/1:1,19:20:48.16:784,48,0	1/1:2,23:25:57.19:930,57,0	0/0:23,0:23:63.22:0,63,1401	0/0:23,0:23:66.23:0,66,1474	0/0:16,0:16:44.77:0,45,1004	0/0:25,0:25:66.23:0,66,1429	0/0:22,1:23:11.19:0,11,1194	0/0:27,0:27:75.26:0,75,1627	0/0:6,0:6:18.06:0,18,402
chr10	24219402	.	C	CATGTATGTATGTATGTATGT	35770.33	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=3.058;DP=750;FS=9.911;HRun=0;HaplotypeScore=415.3721;InbreedingCoeff=0.6951;MQ=59.36;MQ0=1;MQRankSum=-8.209;QD=52.84;ReadPosRankSum=-1.043;VQSLOD=2.6336;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:24:12.04:627,12,0	1/1:11,0:11:3.01:270,3,0	0/0:18,0:15:15.02:0,15,369	0/0:20,0:19:12.15:0,12,355	1/1:26,6:32:15.14:1574,15,0	1/1:23,3:26:15.05:1389,15,0	1/1:17,0:17:12.01:498,12,0	1/1:51,0:49:75.23:2253,75,0	1/1:20,0:22:18.05:1105,18,0	1/1:39,0:40:60.20:3922,60,0	1/1:20,0:20:2.87:217,3,0	1/1:35,0:35:18.05:1076,18,0	1/1:33,7:40:34.67:3039,35,0	1/1:29,6:35:30.10:2632,30,0	0/0:34,0:34:75.23:0,75,3248	1/1:25,0:27:27.08:1398,27,0	1/1:16,0:15:14.99:759,15,0	1/1:7,0:7:4.26:184,4,0	1/1:27,0:27:15.05:493,15,0	1/1:40,0:41:30.54:1872,31,0	1/1:14,0:14:9.03:402,9,0	1/1:29,0:32:21.07:1770,21,0	1/1:22,0:23:17.62:1483,18,0	1/1:16,0:16:3.83:21,4,0	1/1:32,6:40:36.12:3291,36,0	1/1:25,5:32:39.12:2548,39,0	1/1:35,7:42:42.14:2667,42,0	1/1:5,1:6:3.01:279,3,0
chr10	24219730	.	GA	G	5078.27	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=15.777;DP=528;FS=1.990;HRun=7;HaplotypeScore=73.6339;InbreedingCoeff=0.9934;MQ=75.94;MQ0=0;MQRankSum=-2.345;QD=28.06;ReadPosRankSum=2.408;VQSLOD=5.6416;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:7:18.02:0,18,209	0/0:9,0:9:24.04:0,24,285	0/0:14,0:14:29.68:0,30,349	0/0:9,0:9:27.08:0,27,326	0/0:32,0:32:81.26:0,81,1008	0/0:28,0:28:81.26:0,81,1019	0/0:12,0:12:36.12:0,36,453	0/0:29,0:29:75.24:0,75,944	1/1:0,8:8:24.05:245,24,0	1/1:2,32:34:96.21:979,96,0	1/1:0,23:23:66.15:673,66,0	0/0:21,0:21:60.15:0,60,717	0/0:28,0:28:84.27:0,84,1057	0/0:20,0:20:57.18:0,57,717	0/0:10,0:10:30.10:0,30,377	1/1:2,20:22:60.14:612,60,0	1/1:2,18:20:51.11:520,51,0	1/1:0,7:7:18.04:184,18,0	1/1:2,17:19:51.11:520,51,0	1/1:1,35:36:96.21:978,96,0	1/1:0,12:12:36.08:367,36,0	0/0:13,0:13:39.12:0,39,491	0/0:23,0:23:60.19:0,60,755	0/0:10,0:10:27.09:0,27,340	0/0:22,0:22:54.17:0,54,679	0/0:16,1:17:14.53:0,15,498	0/0:32,0:30:93.28:0,93,1156	0/0:11,0:11:30.10:0,30,377
chr10	24220075	.	ACT	A	18953.94	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=9.474;DP=516;FS=21.151;HRun=0;HaplotypeScore=109.7437;InbreedingCoeff=0.9730;MQ=69.92;MQ0=2;MQRankSum=-9.613;QD=40.76;ReadPosRankSum=1.982;VQSLOD=4.5416;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,8:12:27.09:396,27,0	1/1:1,11:12:33.11:485,33,0	0/0:20,0:20:54.16:0,54,952	0/0:8,0:8:17.91:0,18,332	1/1:5,33:38:99:1408,102,0	1/1:1,17:18:54.18:794,54,0	1/1:0,18:18:51.17:737,51,0	1/1:3,26:29:87.29:1279,87,0	1/1:3,13:16:45.15:658,45,0	1/1:3,14:17:51.17:735,51,0	1/1:3,23:25:72.20:1033,72,0	1/1:3,14:17:48.04:616,48,0	1/1:6,19:25:69.20:972,69,0	1/1:0,20:20:60.16:858,60,0	0/0:23,0:23:66.21:0,66,1198	1/1:5,16:19:54.18:794,54,0	1/1:3,9:12:33.11:464,33,0	1/1:0,6:6:18.06:265,18,0	1/1:0,11:11:33.11:486,33,0	1/1:2,32:33:96.32:1409,96,0	1/1:0,12:12:36.12:522,36,0	1/1:2,16:18:51.17:750,51,0	1/1:2,17:19:57.18:814,57,0	1/1:0,4:4:9.03:132,9,0	1/1:3,16:19:57.19:837,57,0	1/1:1,21:22:63.21:927,63,0	1/1:1,28:28:84.28:1236,84,0	1/1:0,10:10:29.94:346,30,0
chr10	24220102	.	GA	G	14925.30	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=7.160;DP=552;FS=3.899;HRun=5;HaplotypeScore=125.8831;InbreedingCoeff=0.9929;MQ=69.35;MQ0=0;MQRankSum=-8.303;QD=29.61;ReadPosRankSum=2.220;VQSLOD=3.7458;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,13:14:33.09:374,33,0	1/1:1,8:9:24.07:272,24,0	0/0:18,0:18:39.12:0,39,515	0/0:14,0:14:23.77:0,24,346	1/1:2,33:35:87.11:982,87,0	1/1:0,20:20:57.16:646,57,0	1/1:4,10:14:27.07:306,27,0	1/1:9,28:37:84.22:943,84,0	1/1:2,20:22:57.16:646,57,0	1/1:2,13:15:39.11:442,39,0	1/1:2,27:29:78.22:882,78,0	1/1:0,17:17:51.15:578,51,0	1/1:0,25:25:75.21:850,75,0	1/1:1,24:25:69.20:782,69,0	0/0:16,0:16:48.16:0,48,656	1/1:0,19:19:57.16:646,57,0	1/1:1,17:18:45.13:508,45,0	1/1:1,7:8:21.03:226,21,0	1/1:3,9:12:27.08:306,27,0	1/1:2,36:38:99:1120,99,0	1/1:2,10:12:27.07:302,27,0	1/1:0,15:15:45.13:510,45,0	1/1:2,20:22:57.16:646,57,0	1/1:1,6:7:18.05:204,18,0	1/1:0,18:18:54.15:612,54,0	1/1:1,21:22:66.18:739,66,0	1/1:7,28:35:90.21:989,90,0	1/1:5,11:16:39.06:417,39,0
chr10	24220381	.	CAAAA	C	15430.78	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-0.822;DP=475;FS=17.166;HRun=12;HaplotypeScore=92.1531;InbreedingCoeff=0.9649;MQ=72.24;MQ0=3;MQRankSum=-4.918;QD=36.05;ReadPosRankSum=3.778;VQSLOD=2.2737;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,6:6:12.02:182,12,0	1/1:1,8:9:21.06:318,21,0	0/0:19,0:18:27.07:0,27,542	0/0:14,0:10:22.87:0,23,374	1/1:5,33:38:84.15:1235,84,0	1/1:3,25:28:66.20:991,66,0	1/1:3,10:13:31.34:457,31,0	1/1:4,23:27:60.07:877,60,0	1/1:1,8:9:24.06:363,24,0	1/1:0,20:19:57.16:818,57,0	1/1:3,22:24:60.17:907,60,0	1/1:3,16:19:42.10:635,42,0	1/1:2,21:23:54.17:817,54,0	1/1:0,11:11:33.11:499,33,0	0/0:13,0:13:36.12:0,36,838	1/1:2,14:16:39.12:590,39,0	1/1:0,13:13:35.61:544,36,0	1/1:4,6:10:15:227,15,0	1/1:1,13:14:39.12:590,39,0	1/1:4,25:29:72.20:1090,72,0	1/1:1,7:8:18.05:263,18,0	1/1:2,15:17:39.11:581,39,0	1/1:2,16:18:48.14:726,48,0	1/1:1,7:7:12.04:182,12,0	1/1:0,8:8:21.07:318,21,0	1/1:2,14:16:42.13:634,42,0	1/1:2,25:27:63.19:953,63,0	1/1:1,15:16:42.12:636,42,0
chr10	24221865	.	A	AT	6597.67	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-7.975;DP=576;FS=10.114;HRun=6;HaplotypeScore=72.8860;InbreedingCoeff=0.9900;MQ=75.49;MQ0=0;MQRankSum=-1.630;QD=31.87;ReadPosRankSum=2.225;VQSLOD=4.8502;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,26:28:72.23:904,72,0	0/0:8,0:8:24.04:0,24,240	0/0:16,0:16:28.25:0,28,227	0/0:14,0:15:8.55:0,9,176	0/0:36,0:36:99:0,105,1044	0/0:21,0:21:63.12:0,63,629	0/0:14,0:14:36.05:0,36,355	0/0:24,0:24:63.11:0,63,624	1/1:1,13:14:39.12:482,39,0	1/1:2,20:22:57.17:702,57,0	1/1:2,19:23:60.16:733,60,0	0/0:21,0:21:60.13:0,60,607	0/0:19,0:19:45.07:0,45,451	0/0:19,0:19:57.10:0,57,569	0/0:17,0:17:45.09:0,45,454	1/1:0,21:21:51.16:641,51,0	1/1:2,23:25:63.20:792,63,0	1/1:2,16:18:42.13:528,42,0	1/1:1,21:22:63.15:759,63,0	1/1:0,18:18:53.94:603,54,0	1/1:1,15:16:36.12:453,36,0	0/0:19,0:19:51.09:0,51,508	0/0:18,0:18:42.08:0,42,423	0/0:18,0:18:48.05:0,48,472	0/0:25,0:25:69.05:0,69,688	0/0:27,1:28:43.43:0,43,749	0/0:28,0:28:84.04:0,84,803	0/0:23,0:23:63.01:0,63,626
chr10	24224029	.	TA	T	11103.03	PASS	AB=1.000;AC=51;AF=0.911;AN=56;BaseQRankSum=5.651;DP=498;FS=7.068;HRun=8;HaplotypeScore=83.2486;InbreedingCoeff=0.7651;MQ=73.23;MQ0=0;MQRankSum=-5.374;QD=24.56;ReadPosRankSum=1.520;VQSLOD=5.5388;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,8:10:21.03:203,21,0	1/1:0,6:6:18.03:173,18,0	0/1:6,0:6:7.56:8,0,98	0/0:13,0:13:27.08:0,27,314	1/1:3,22:25:59.88:545,60,0	1/1:3,22:25:66.10:637,66,0	1/1:2,5:7:15.02:145,15,0	1/1:3,21:24:63.09:608,63,0	1/1:0,14:14:36.06:348,36,0	1/1:1,26:27:78.12:749,78,0	1/1:2,30:32:71.97:673,72,0	1/1:1,20:21:60.09:579,60,0	1/1:1,29:30:84.14:810,84,0	1/1:3,18:21:57.01:532,57,0	0/0:33,0:33:87.25:0,87,1040	1/1:1,16:17:39.06:377,39,0	1/1:3,6:9:15.02:145,15,0	1/1:0,14:14:42.07:405,42,0	1/1:4,14:18:42.05:402,42,0	1/1:3,23:26:63.05:600,63,0	1/1:2,11:13:33.05:319,33,0	1/1:3,16:19:51.07:486,51,0	1/1:1,9:10:27.04:260,27,0	1/1:0,6:6:18.03:174,18,0	1/1:3,14:17:48.01:452,48,0	1/1:1,23:24:66.10:637,66,0	1/1:4,25:29:81.13:781,81,0	1/1:0,2:2:6.01:58,6,0
chr10	24224077	.	CTCCTTTTG	C	17954.17	PASS	AB=0.550;AC=31;AF=0.554;AN=56;BaseQRankSum=8.976;DP=522;FS=3.934;HRun=0;HaplotypeScore=169.4803;InbreedingCoeff=0.8969;MQ=69.27;MQ0=0;MQRankSum=-16.635;QD=65.53;ReadPosRankSum=2.392;VQSLOD=4.6690;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,11:11:24.08:688,24,0	1/1:0,7:7:21.07:602,21,0	0/0:10,0:10:27.09:0,27,1164	0/0:11,0:11:29.84:0,30,986	1/1:0,29:29:66.23:1892,66,0	1/1:6,13:19:51.14:1286,51,0	1/1:3,11:14:24.08:688,24,0	1/1:6,26:32:75.20:1826,75,0	0/0:16,0:16:48.16:0,48,2094	0/0:31,0:31:93.32:0,93,3925	0/0:38,0:38:99:0,114,4904	1/1:1,13:14:39.13:1082,39,0	1/1:2,15:17:45.15:1289,45,0	1/1:1,14:15:45.15:1254,45,0	0/0:30,0:30:90.28:0,90,3664	0/0:21,0:21:60.21:0,60,2637	0/0:11,0:11:33.06:0,33,1210	0/0:17,0:17:48.12:0,48,1825	0/0:22,0:22:66.21:0,66,2669	0/0:26,0:26:78.26:0,78,3313	0/0:15,0:15:45.15:0,45,1870	1/1:8,14:22:45.14:1121,45,0	1/1:2,15:17:45.14:1228,45,0	1/1:2,7:9:10.70:342,11,0	1/1:1,14:15:36.12:1032,36,0	0/1:4,18:22:74.03:1516,0,74	1/1:6,23:29:72.25:2021,72,0	1/1:1,1:2:3.01:86,3,0
chr10	24224808	.	G	GCACACACACACA	15780.35	PASS	AB=0.994;AC=38;AF=0.679;AN=56;BaseQRankSum=6.854;DP=490;FS=13.462;HRun=0;HaplotypeScore=185.5986;InbreedingCoeff=-0.0315;MQ=65.73;MQ0=2;MQRankSum=-10.196;QD=38.21;ReadPosRankSum=-1.964;VQSLOD=3.0180;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:17:20.36:353,20,0	0/1:7,0:7:40.90:250,0,41	0/0:33,0:22:31.12:0,31,894	0/0:25,0:17:39.01:0,39,621	0/1:14,0:13:81.67:357,0,82	0/1:17,0:17:99:510,0,128	0/1:16,0:16:99:236,0,146	0/1:33,0:32:99:989,0,458	1/1:5,7:15:12.04:703,12,0	1/1:15,3:18:41.10:1559,41,0	1/1:18,2:20:17.76:640,18,0	1/1:13,0:13:18.06:793,18,0	1/1:17,0:17:5.99:659,6,0	0/1:8,0:8:14.98:124,0,15	0/0:18,0:18:48.60:0,49,1495	1/1:15,6:21:39.06:1544,39,0	1/1:13,1:14:16.56:495,17,0	1/1:5,6:12:6.49:341,6,0	1/1:13,0:12:30.09:1173,30,0	1/1:17,15:35:18.01:896,18,0	1/1:9,0:9:3.94:28,4,0	0/1:12,1:12:82.81:750,0,83	0/1:20,0:20:99:477,0,199	1/1:11,0:11:7.73:385,8,0	0/1:24,0:24:99:1379,0,157	0/1:17,0:17:99:343,0,311	0/1:21,0:21:99:547,0,225	0/1:8,0:8:78.77:252,0,79
chr10	24224812	.	G	GCACACACACACACA	19235.27	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=1.596;DP=550;FS=0.902;HRun=0;HaplotypeScore=200.3755;InbreedingCoeff=0.6567;MQ=58.79;MQ0=2;MQRankSum=-6.715;QD=40.93;ReadPosRankSum=0.037;VQSLOD=4.3276;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:18:14.89:454,15,0	1/1:4,2:11:6.02:404,6,0	0/0:32,0:22:12.04:0,12,315	0/0:24,0:15:8.99:0,9,234	1/1:8,0:22:9.03:384,9,0	1/1:9,5:22:12.04:749,12,0	1/1:11,4:20:6.02:404,6,0	1/1:33,0:32:39.39:1329,39,0	1/1:14,0:14:15.05:717,15,0	1/1:19,0:19:36.12:1519,36,0	1/1:21,0:21:20.67:622,21,0	1/1:5,6:19:18.06:1153,18,0	1/1:15,1:18:18.06:786,18,0	1/1:3,2:9:3.01:202,3,0	0/0:22,0:22:20.98:0,21,1441	1/1:20,0:20:27.09:1260,27,0	1/1:13,0:13:8.72:275,9,0	1/1:10,0:10:6.02:311,6,0	1/1:13,0:12:24.08:1085,24,0	1/1:33,0:33:15.05:743,15,0	1/1:9,0:9:3.95:53,4,0	1/1:6,6:14:18.06:1153,18,0	1/1:14,4:27:12.93:804,13,0	1/1:8,3:11:5.19:403,5,0	1/1:11,9:29:32.80:1935,33,0	1/1:13,2:26:31.15:1399,31,0	1/1:13,5:25:15.05:750,15,0	1/1:6,1:10:6.02:345,6,0
chr10	24225039	.	C	CA	12139.46	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-6.678;DP=530;FS=7.411;HRun=1;HaplotypeScore=80.0896;InbreedingCoeff=0.9963;MQ=84.43;MQ0=0;MQRankSum=-2.177;QD=43.98;ReadPosRankSum=2.430;VQSLOD=4.5711;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:57.16:0,57,758	1/1:0,9:9:27.09:431,27,0	0/0:15,0:15:41.17:0,41,549	0/0:18,0:18:54.17:0,54,727	1/1:0,25:25:75.25:1188,75,0	1/1:0,14:14:39.13:623,39,0	1/1:1,5:6:15.05:240,15,0	1/1:0,28:28:81.28:1294,81,0	0/0:17,0:17:51:0,51,681	0/0:27,0:27:81.27:0,81,1118	0/0:20,0:20:60.20:0,60,838	1/1:0,20:20:54.18:863,54,0	1/1:0,26:26:75.26:1198,75,0	1/1:1,27:28:75.19:1164,75,0	0/0:23,0:23:69.17:0,69,923	0/0:19,0:19:57.15:0,57,774	0/0:14,0:14:41.50:0,42,553	0/0:11,0:11:33.11:0,33,461	0/0:20,0:20:57.19:0,57,795	0/0:28,0:28:84.22:0,84,1132	0/0:23,0:23:66.14:0,66,881	1/1:0,18:18:48.16:767,48,0	1/1:1,17:18:45.02:719,45,0	1/1:0,9:9:24.08:384,24,0	1/1:0,21:21:54.18:863,54,0	1/1:1,19:20:18.29:845,18,0	1/1:1,19:21:60.20:938,60,0	1/1:0,13:13:39.13:623,39,0
chr10	24225772	.	TC	T	18895.16	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=1.618;DP=677;FS=0.000;HRun=5;HaplotypeScore=75.4295;InbreedingCoeff=0.9443;MQ=81.49;MQ0=0;MQRankSum=-7.052;QD=31.03;ReadPosRankSum=3.715;VQSLOD=5.3689;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,42:43:99:1222,108,0	1/1:1,4:5:6.02:68,6,0	0/0:20,0:20:36.22:0,36,666	0/0:24,0:24:54.12:0,54,679	1/1:1,28:29:84.24:949,84,0	1/1:1,24:25:72.21:817,72,0	1/1:2,26:28:72.20:817,72,0	1/1:1,40:41:99:1237,111,0	1/1:0,18:18:45.13:510,45,0	1/1:2,22:24:66.16:730,66,0	1/1:1,20:21:54.15:613,54,0	1/1:2,28:30:81.23:919,81,0	1/1:0,24:24:69.20:783,69,0	1/1:0,23:23:69.20:782,69,0	0/0:24,0:23:69.23:0,69,941	1/1:1,18:19:51.15:579,51,0	1/1:2,35:37:99:1123,99,0	1/1:0,18:18:54.15:613,54,0	1/1:0,17:17:51.15:578,51,0	1/1:2,34:36:99:1123,99,0	1/1:0,17:17:48.14:545,48,0	1/1:0,25:25:72.21:817,72,0	1/1:4,23:27:72.20:810,72,0	1/1:1,26:27:69.20:782,69,0	1/1:0,15:15:42.12:476,42,0	1/1:0,33:33:99:1120,99,0	1/1:1,23:24:69.20:783,69,0	1/1:0,3:3:9.03:101,9,0
chr10	24227552	.	AACAG	A	622.53	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.012;DP=585;FS=5.241;HRun=0;HaplotypeScore=111.2020;InbreedingCoeff=0.9433;MQ=70.13;MQ0=2;MQRankSum=0.326;QD=29.64;ReadPosRankSum=2.226;VQSLOD=3.4502;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,18:21:39.13:717,39,0	0/0:11,0:11:33.11:0,33,869	0/0:33,0:21:39.40:0,39,770	0/0:38,0:30:39.67:0,40,1044	0/0:30,0:30:81.26:0,81,1989	0/0:14,0:14:39.13:0,39,860	0/0:23,0:23:57.18:0,57,1381	0/0:27,0:27:75.26:0,75,1741	0/0:24,0:24:60.19:0,60,1507	0/0:32,0:32:93.31:0,93,2354	0/0:17,0:17:45.15:0,45,1051	0/0:21,0:21:57.04:0,57,1335	0/0:20,0:20:57.20:0,57,1426	0/0:15,0:15:39.12:0,39,963	0/0:27,0:27:75.24:0,75,1917	0/0:26,0:26:72.25:0,72,1901	0/0:16,0:16:45.02:0,45,1086	0/0:3,0:3:9.03:0,9,236	0/0:17,0:15:42.14:0,42,1083	0/0:26,0:26:75.19:0,75,1816	0/0:23,0:23:60.21:0,60,1495	0/0:11,0:11:27.09:0,27,670	0/0:16,0:16:48.16:0,48,1252	0/0:13,0:13:30.06:0,30,705	0/0:23,0:23:60.18:0,60,1517	0/0:21,0:21:60.19:0,60,1404	0/0:16,0:16:45.15:0,45,1180	0/0:20,0:20:57.20:0,57,1458
chr10	24228184	.	A	AT	7941.07	PASS	AB=1.000;AC=31;AF=0.554;AN=56;BaseQRankSum=-13.589;DP=431;FS=0.368;HRun=5;HaplotypeScore=37.3987;InbreedingCoeff=0.9020;MQ=69.65;MQ0=0;MQRankSum=1.415;QD=32.81;ReadPosRankSum=0.895;VQSLOD=4.8064;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:54.11:0,54,569	1/1:0,6:6:18.02:217,18,0	0/1:5,0:5:6.91:7,0,22	0/0:5,0:5:7.25:0,7,66	1/1:1,22:23:57.14:730,57,0	1/1:0,13:13:39.13:513,39,0	1/1:0,5:5:15.05:197,15,0	1/1:3,28:31:84.26:1091,84,0	0/0:15,0:15:45.11:0,45,483	0/0:30,0:30:81.20:0,81,871	0/0:17,0:17:45.11:0,45,484	1/1:1,11:12:27.09:355,27,0	1/1:2,20:22:51.17:671,51,0	1/1:2,9:11:27.09:355,27,0	0/0:17,0:17:45.10:0,45,476	0/0:18,0:18:54.14:0,54,580	0/0:11,0:11:33.08:0,33,355	0/0:8,0:8:24.06:0,24,257	0/0:20,0:20:57.13:0,57,604	0/0:22,0:22:66.15:0,66,701	0/0:8,0:8:24.06:0,24,258	1/1:0,15:15:39.13:513,39,0	1/1:1,19:20:54.18:710,54,0	1/1:0,3:3:6.02:79,6,0	1/1:1,23:24:60.20:789,60,0	1/1:3,27:30:22.78:1001,23,0	1/1:2,17:19:45.15:592,45,0	1/1:0,3:3:9.03:118,9,0
chr10	24229677	.	C	CCA	7471.51	PASS	AB=1.000;AC=51;AF=0.911;AN=56;BaseQRankSum=7.025;DP=576;FS=9.090;HRun=0;HaplotypeScore=205.6036;InbreedingCoeff=0.7905;MQ=58.55;MQ0=1;MQRankSum=-5.999;QD=13.99;ReadPosRankSum=2.797;VQSLOD=3.6339;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:16:41.68:350,42,0	1/1:10,0:10:22.22:113,22,0	0/1:18,0:14:7.51:8,0,245	0/0:21,0:15:37.91:0,38,389	1/1:26,0:26:49.79:319,50,0	1/1:28,0:28:70.68:378,71,0	1/1:12,0:12:30.77:169,31,0	1/1:42,0:42:99:519,104,0	1/1:25,0:25:52.78:376,53,0	1/1:24,0:24:65.57:533,66,0	1/1:27,0:27:47.68:388,48,0	1/1:25,0:25:56.39:280,56,0	1/1:25,0:25:55.40:288,55,0	1/1:23,0:23:40.78:222,41,0	0/0:21,0:21:63.20:0,63,869	1/1:28,0:28:80.48:686,80,0	1/1:10,1:11:29.69:221,30,0	1/1:10,0:10:24:225,24,0	1/1:17,0:17:44.51:343,45,0	1/1:22,0:22:50.52:347,51,0	1/1:17,3:20:20.71:209,21,0	1/1:11,0:11:28.41:161,28,0	1/1:21,0:21:39.02:252,39,0	1/1:15,0:15:29.06:159,29,0	1/1:26,0:26:65.27:351,65,0	1/1:20,0:20:47.65:249,48,0	1/1:25,0:25:61.39:291,61,0	1/1:7,0:7:8.10:34,8,0
chr10	24229680	.	C	CA	9836.94	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=6.101;DP=564;FS=4.339;HRun=1;HaplotypeScore=186.6914;InbreedingCoeff=0.9707;MQ=57.27;MQ0=1;MQRankSum=-5.768;QD=19.48;ReadPosRankSum=4.555;VQSLOD=5.1552;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,12:17:41.01:270,41,0	1/1:10,0:10:23.99:222,24,0	0/0:17,0:12:28.88:0,29,304	0/0:21,0:15:41.62:0,42,445	1/1:25,0:25:69.99:570,70,0	1/1:27,1:28:74.89:663,75,0	1/1:11,2:13:27.77:275,28,0	1/1:36,4:40:99:1127,114,0	1/1:5,18:23:43.12:305,43,0	1/1:5,19:24:61.75:371,62,0	1/1:7,18:26:46.18:286,46,0	1/1:23,1:24:68.10:532,68,0	1/1:21,3:24:59.29:526,59,0	1/1:19,4:23:44.88:425,45,0	0/0:21,0:21:63.19:0,63,846	1/1:9,18:27:73.37:478,73,0	1/1:5,6:11:19.82:148,20,0	1/1:2,6:8:18.26:141,18,0	1/1:7,10:17:27.02:237,27,0	1/1:8,14:22:49.56:312,50,0	1/1:13,7:20:18.94:157,19,0	1/1:11,0:11:30.01:268,30,0	1/1:21,1:22:52.75:430,53,0	1/1:13,1:14:35.44:309,35,0	1/1:24,1:25:68.97:631,69,0	1/1:18,1:19:56.29:504,56,0	1/1:24,1:25:68.71:582,69,0	1/1:4,3:7:8.96:69,9,0
chr10	24229685	.	CCACACA	C	4862.97	PASS	AB=1.000;AC=22;AF=0.393;AN=56;BaseQRankSum=1.302;DP=567;FS=0.379;HRun=0;HaplotypeScore=248.7701;InbreedingCoeff=0.8163;MQ=56.26;MQ0=1;MQRankSum=-11.727;QD=20.18;ReadPosRankSum=-3.013;VQSLOD=3.8874;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:15,2:17:36.12:498,36,0	0/0:11,0:11:9.53:0,10,50	0/0:15,0:10:20.87:0,21,496	0/0:22,0:16:34.03:0,34,744	0/0:30,0:30:28.63:0,29,149	0/0:30,0:30:55.43:0,55,192	0/0:11,0:11:22.79:0,23,95	0/1:42,0:42:21.02:21,0,259	1/1:22,0:22:51.10:562,51,0	1/1:23,0:23:52.21:582,52,0	1/1:23,2:25:45.07:518,45,0	0/0:23,0:23:44.41:0,44,168	0/0:22,0:22:40.65:0,41,179	0/0:23,0:23:33.02:0,33,131	0/0:20,0:20:60.19:0,60,1922	1/1:23,2:25:60.59:817,61,0	1/1:11,2:13:6.17:250,6,0	1/1:7,2:9:14.16:290,14,0	1/1:12,4:16:45.08:637,45,0	1/1:21,0:21:36.09:412,36,0	1/1:15,6:21:19.30:265,19,0	0/0:10,0:10:21.87:0,22,78	0/0:23,0:23:37.23:0,37,136	0/0:14,0:14:24.38:0,24,92	0/0:25,0:25:51.17:0,51,180	0/0:21,0:21:6.50:0,6,118	0/0:26,0:26:54.56:0,55,199	0/1:7,0:7:11.01:11,0,17
chr10	24229686	.	CACA	C	17353.82	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=6.555;DP=558;FS=12.387;HRun=0;HaplotypeScore=174.6878;InbreedingCoeff=0.9562;MQ=54.38;MQ0=1;MQRankSum=-5.051;QD=34.50;ReadPosRankSum=4.285;VQSLOD=5.0446;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,0:17:40.90:406,41,0	1/1:0,11:11:24.08:445,24,0	0/0:14,0:9:22.42:0,22,371	0/0:20,1:15:9.36:0,9,543	1/1:0,30:30:63.17:1117,63,0	1/1:1,29:30:72.25:1338,72,0	1/1:2,8:11:26.95:426,27,0	1/1:8,34:42:99:1730,106,0	1/1:3,0:21:54.06:527,54,0	1/1:3,0:23:56.41:544,56,0	1/1:6,0:25:44.20:415,44,0	1/1:1,22:23:60.21:1114,60,0	1/1:3,19:22:50.88:877,51,0	1/1:4,19:23:45.10:764,45,0	0/0:20,0:20:60.19:0,60,1312	1/1:7,0:25:73.14:698,73,0	1/1:6,0:12:13.08:210,13,0	1/1:3,0:9:20.80:216,21,0	1/1:5,0:15:45.05:450,45,0	1/1:4,0:19:39:366,39,0	1/1:13,0:20:24.76:206,25,0	1/1:0,10:10:27.56:503,28,0	1/1:1,21:22:45.15:837,45,0	1/1:1,13:14:33.07:578,33,0	1/1:2,23:25:66.17:1179,66,0	1/1:2,19:21:41.21:954,41,0	1/1:1,25:26:69.06:1245,69,0	1/1:3,4:7:12.04:207,12,0
chr10	24229845	.	A	AGT	16298.22	PASS	AB=1.000;AC=51;AF=0.911;AN=56;BaseQRankSum=1.366;DP=599;FS=3.421;HRun=0;HaplotypeScore=131.8390;InbreedingCoeff=0.7839;MQ=60.87;MQ0=1;MQRankSum=0.133;QD=29.00;ReadPosRankSum=2.761;VQSLOD=6.6813;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,16:25:39.13:658,39,0	1/1:11,0:11:30.08:330,30,0	0/0:14,0:11:25.71:0,26,307	0/1:6,0:4:15.04:15,0,24	1/1:38,0:38:96.17:1064,96,0	1/1:25,0:25:57.16:632,57,0	1/1:12,0:12:26.99:287,27,0	1/1:38,0:38:90.18:921,90,0	1/1:8,17:25:42.14:691,42,0	1/1:6,16:21:54.15:879,54,0	1/1:3,23:26:58.13:964,58,0	1/1:20,0:20:39.11:432,39,0	1/1:24,0:24:66.18:733,66,0	1/1:14,0:14:36.10:397,36,0	0/0:22,0:22:60.17:0,60,745	1/1:4,15:19:30.10:506,30,0	1/1:3,13:16:19.77:446,20,0	1/1:2,8:10:21.07:354,21,0	1/1:5,16:21:54.18:889,54,0	1/1:10,23:33:66.14:1088,66,0	1/1:2,15:17:30.10:506,30,0	1/1:19,0:19:54.15:593,54,0	1/1:28,0:28:72.20:794,72,0	1/1:16,0:16:42.12:477,42,0	1/1:31,0:31:72.19:783,72,0	1/1:25,0:25:72.17:751,72,0	1/1:24,0:24:57.17:662,57,0	1/1:17,0:17:39.11:447,39,0
chr10	24229850	.	G	GTA	19927.86	PASS	AB=1.000;AC=49;AF=0.875;AN=56;BaseQRankSum=-2.530;DP=591;FS=4.470;HRun=0;HaplotypeScore=119.8525;InbreedingCoeff=0.4462;MQ=61.27;MQ0=1;MQRankSum=1.580;QD=35.97;ReadPosRankSum=5.297;VQSLOD=6.9637;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:20:20.05:326,20,0	1/1:0,11:12:30.10:578,30,0	0/0:16,0:11:22.12:0,22,364	0/1:6,0:4:17.91:18,0,37	1/1:1,35:36:96.31:1835,96,0	1/1:1,27:28:57.20:1100,57,0	1/1:0,11:11:27.09:497,27,0	1/1:0,39:40:99:1958,120,0	1/1:22,1:23:3.08:357,3,0	0/1:22,0:21:6.05:325,0,6	1/1:25,0:25:37:481,37,0	1/1:0,19:19:39.13:752,39,0	1/1:0,23:23:66.23:1262,66,0	1/1:0,14:14:36.12:695,36,0	0/0:21,0:21:63.20:0,63,938	1/1:18,0:18:30.01:265,30,0	1/1:14,0:14:3.26:221,3,0	1/1:9,0:9:6.06:193,6,0	0/1:20,0:20:12.95:349,0,13	1/1:33,0:33:19.54:515,20,0	1/1:17,0:17:12.04:245,12,0	1/1:0,19:20:54.19:1042,54,0	1/1:0,29:29:72.25:1389,72,0	1/1:0,15:15:42.14:810,42,0	1/1:0,27:28:75.15:1405,75,0	1/1:0,25:28:81.22:1460,81,0	1/1:0,26:27:57.20:1097,57,0	1/1:0,17:17:39.13:752,39,0
chr10	24229899	.	GTA	G	3556.40	PASS	AC=18;AF=0.333;AN=54;BaseQRankSum=-8.308;DP=515;FS=0.000;HRun=0;HaplotypeScore=164.2473;InbreedingCoeff=0.9306;MQ=64.31;MQ0=0;MQRankSum=-1.344;QD=23.24;ReadPosRankSum=0.880;VQSLOD=3.8042;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:54.12:0,54,831	0/0:9,0:9:18.04:0,18,197	./.	0/0:13,0:7:8.72:0,9,66	0/0:27,0:27:69.16:0,69,759	0/0:21,0:21:45.11:0,45,487	0/0:9,0:9:24.04:0,24,251	0/0:43,0:43:99:0,102,989	1/1:3,16:19:36.08:452,36,0	1/1:3,17:20:57.08:696,57,0	1/1:7,22:29:49.08:615,49,0	0/0:15,0:15:39.11:0,39,429	0/0:27,0:27:60.09:0,60,635	0/0:15,0:15:39.08:0,39,414	0/0:14,0:14:39.09:0,39,576	1/1:5,12:17:39.06:475,39,0	1/1:5,5:10:17.84:215,18,0	1/1:3,2:5:3.01:39,3,0	1/1:10,8:18:9.13:409,9,0	1/1:2,26:28:45.14:590,45,0	1/1:4,3:7:5.68:63,6,0	0/0:12,0:12:27.07:0,27,296	0/0:17,0:17:36.07:0,36,390	0/0:14,0:14:30.03:0,30,317	0/0:25,0:25:60.15:0,60,651	0/0:29,0:29:81.17:0,81,824	0/0:28,0:28:54.08:0,54,576	0/0:12,0:12:21.06:0,21,241
chr10	24231771	.	TAC	T	298.60	PASS	AB=0.952;AC=29;AF=0.853;AN=34;BaseQRankSum=3.162;DP=644;FS=2.004;HRun=0;HaplotypeScore=171.8105;InbreedingCoeff=0.1775;MQ=52.27;MQ0=15;MQRankSum=-3.048;QD=0.76;ReadPosRankSum=2.308;VQSLOD=2.8980;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:29:2.84:14,3,0	./.	./.	./.	1/1:16,0:16:0.89:2,1,0	./.	./.	./.	1/1:11,0:11:5.68:28,6,0	1/1:22,0:22:5.68:28,6,0	./.	1/1:30,0:30:8.52:42,9,0	1/1:27,0:27:14.20:70,14,0	1/1:34,0:34:8.52:42,9,0	0/1:20,4:24:16.53:17,0,121	1/1:28,0:28:2.84:14,3,0	1/1:17,0:16:2.84:14,3,0	0/0:11,0:10:0.47:0,0,1	./.	./.	./.	1/1:30,0:29:5.68:28,6,0	0/1:21,0:20:0:0,0,0	0/1:14,0:14:0:0,0,0	1/1:31,0:31:5.68:28,6,0	1/1:22,0:22:5.68:28,6,0	1/1:38,0:38:5.68:28,6,0	./.
chr10	24231793	.	CACACACACACACACACACACACACACACACACACGT	C	13215.53	PASS	AB=1.000;AC=26;AF=0.500;AN=52;BaseQRankSum=9.532;DP=568;FS=37.744;HRun=0;HaplotypeScore=300.7703;InbreedingCoeff=0.7558;MQ=47.33;MQ0=32;MQRankSum=-3.897;QD=53.94;ReadPosRankSum=5.708;VQSLOD=1.9629;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:46:19.02:0,19,904	1/1:0,8:8:9.03:500,9,0	0/0:25,0:4:12.04:0,12,459	0/0:33,0:8:24.08:0,24,1053	1/1:0,16:16:6.02:497,6,0	1/1:2,27:28:12.04:909,12,0	0/1:6,0:5:31.96:32,0,310	1/1:3,0:1:3.01:47,3,0	0/0:16,0:16:33.11:0,33,2360	0/0:26,0:26:53.44:0,53,4426	0/1:15,0:15:19.16:19,0,664	1/1:1,21:22:15.05:1327,15,0	1/1:0,23:23:30.10:2596,30,0	1/1:3,20:21:27.09:2200,27,0	0/0:31,0:30:53.68:0,54,6249	0/0:29,0:29:32.11:0,32,2738	0/0:21,0:20:18.06:0,18,1139	0/0:13,0:11:27.98:0,28,1716	0/0:9,0:9:27.09:0,27,1445	0/0:21,0:20:30.09:0,30,2430	0/0:31,0:28:42.62:0,43,3397	1/1:1,20:20:18.06:1429,18,0	1/1:1,15:15:5.59:426,6,0	./.	1/1:0,17:17:12.04:1042,12,0	1/1:0,22:22:52.39:1157,52,0	1/1:0,24:24:11.96:1035,12,0	./.
chr10	24231811	.	CACACACACACACACACGT	C	7687.86	PASS	AB=0.955;AC=37;AF=0.685;AN=54;BaseQRankSum=8.121;DP=593;FS=13.099;HRun=0;HaplotypeScore=218.1535;InbreedingCoeff=0.0428;MQ=49.30;MQ0=44;MQRankSum=-3.036;QD=16.25;ReadPosRankSum=4.223;VQSLOD=2.4780;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:13,27:39:99:134,0,116	1/1:8,0:8:9.03:206,9,0	0/0:25,0:1:0.89:0,1,2	0/0:29,0:2:6.01:0,6,71	1/1:16,0:16:6.02:203,6,0	1/1:30,0:28:12.04:342,12,0	0/0:10,0:9:3:0,3,64	1/1:17,0:15:45.13:539,45,0	0/1:16,0:16:99:181,0,127	0/1:32,0:32:99:620,0,341	0/1:18,0:18:47.52:48,0,115	1/1:21,0:21:15.05:592,15,0	1/1:23,0:23:30.10:1126,30,0	1/1:23,0:21:27.09:898,27,0	0/0:38,0:37:72.25:0,72,3128	0/1:29,0:28:46.44:46,0,302	1/1:17,0:16:2.98:22,3,0	0/1:15,0:13:99:128,0,163	0/1:7,0:7:55.37:137,0,55	0/1:23,0:22:10.12:10,0,329	0/1:31,0:28:82.05:82,0,449	1/1:21,0:20:18.06:554,18,0	1/1:17,0:15:5.59:132,6,0	./.	1/1:17,0:17:12.04:454,12,0	1/1:22,0:22:46.02:752,46,0	1/1:24,0:24:12.04:448,12,0	1/1:6,0:3:3.01:34,3,0
chr10	24231815	.	CACACACACACACGT	C	7711.87	PASS	AB=0.983;AC=42;AF=0.778;AN=54;BaseQRankSum=5.905;DP=581;FS=5.857;HRun=0;HaplotypeScore=195.5367;InbreedingCoeff=0.3032;MQ=49.90;MQ0=43;MQRankSum=-1.023;QD=16.62;ReadPosRankSum=1.510;VQSLOD=3.5054;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:39,0:38:67.36:106,0,67	1/1:8,0:8:9.03:151,9,0	0/0:22,0:1:1.25:0,1,3	0/0:28,0:2:6.01:0,6,71	1/1:16,0:16:6.02:147,6,0	1/1:30,0:28:12.04:230,12,0	0/0:11,0:10:2.99:0,3,36	1/1:20,0:18:54.16:658,54,0	1/1:12,3:15:33.11:546,33,0	1/1:31,1:32:43.25:978,43,0	1/1:16,0:16:5.90:59,6,0	1/1:21,0:21:15.05:452,15,0	1/1:23,0:23:30.10:847,30,0	1/1:23,0:21:27.09:647,27,0	0/0:38,0:37:72.24:0,72,2444	0/1:26,2:27:81.60:126,0,82	1/1:15,0:14:3.01:74,3,0	0/1:13,0:11:34.64:177,0,35	1/1:8,0:8:20.89:235,21,0	1/1:21,0:20:5.97:51,6,0	0/1:29,0:26:32.54:318,0,33	1/1:21,0:20:18.06:414,18,0	1/1:17,0:15:5.69:87,6,0	./.	1/1:17,0:17:12.04:342,12,0	1/1:22,0:22:45.61:696,46,0	1/1:24,0:24:12.04:336,12,0	1/1:6,0:3:3.01:34,3,0
chr10	24231817	.	CACACACACACGT	C	7310.78	PASS	AB=0.848;AC=43;AF=0.796;AN=54;BaseQRankSum=5.441;DP=569;FS=2.535;HRun=0;HaplotypeScore=184.0840;InbreedingCoeff=0.3627;MQ=51.19;MQ0=43;MQRankSum=-0.704;QD=16.21;ReadPosRankSum=0.664;VQSLOD=3.6682;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:39,0:38:44.26:93,0,44	1/1:8,0:8:9.03:123,9,0	0/0:22,0:1:1.25:0,1,3	0/0:29,0:3:6.01:0,6,71	1/1:16,0:16:6.02:120,6,0	1/1:30,0:28:12.04:177,12,0	0/0:11,0:10:2.99:0,3,28	1/1:22,0:20:60.18:730,60,0	1/1:15,1:16:36.12:597,36,0	1/1:2,28:30:74.88:1054,75,0	1/1:2,14:16:6.01:60,6,0	1/1:21,0:21:15.05:383,15,0	1/1:23,0:23:30.10:709,30,0	1/1:23,0:21:27.09:531,27,0	0/0:38,0:37:72.24:0,72,2151	0/1:4,20:24:49.84:94,0,50	1/1:3,11:13:3.01:118,3,0	0/1:11,0:9:20.66:135,0,21	1/1:7,0:7:20.89:235,21,0	1/1:2,16:17:3.01:31,3,0	1/1:26,0:23:36.50:434,37,0	1/1:21,0:20:18.06:346,18,0	1/1:17,0:15:5.79:73,6,0	./.	1/1:17,0:17:12.04:287,12,0	1/1:22,0:22:45.61:668,46,0	1/1:24,0:24:11.96:281,12,0	1/1:6,0:3:3.01:34,3,0
chr10	24231827	.	CGT	C	5625.42	PASS	AB=0.773;AC=48;AF=0.889;AN=54;BaseQRankSum=5.995;DP=590;FS=6.206;HRun=0;HaplotypeScore=150.2911;InbreedingCoeff=0.4456;MQ=63.82;MQ0=38;MQRankSum=-1.409;QD=11.23;ReadPosRankSum=1.405;VQSLOD=4.4019;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:33,4:36:2.96:29,3,0	1/1:8,0:8:9.02:97,9,0	0/1:30,0:9:11.34:11,0,86	0/0:35,0:9:9.06:0,9,194	1/1:16,0:16:5.75:41,6,0	1/1:30,0:28:12.03:129,12,0	0/1:2,10:11:0:0,0,0	1/1:1,27:27:78.24:960,78,0	1/1:17,1:18:42.11:504,42,0	1/1:30,0:30:69.18:843,69,0	1/1:16,0:16:6.01:60,6,0	1/1:21,0:21:15.02:145,15,0	1/1:23,0:23:30.04:295,30,0	1/1:23,0:21:27.05:276,27,0	0/0:36,0:35:71.91:0,72,1089	1/1:24,0:23:3:30,3,0	1/1:14,0:13:3.01:30,3,0	1/1:11,0:10:20.32:262,20,0	1/1:0,11:11:32.91:373,33,0	1/1:17,0:17:3.01:31,3,0	1/1:25,0:23:36.12:470,36,0	1/1:20,0:20:18.03:182,18,0	1/1:17,0:15:6:61,6,0	./.	1/1:17,0:17:12.02:118,12,0	1/1:22,0:22:45.12:527,45,0	1/1:24,0:24:11.85:116,12,0	1/1:3,4:4:3.01:34,3,0
chr10	24233152	.	TTA	T	233.56	PASS	AC=12;AF=0.545;AN=22;BaseQRankSum=0.546;DP=121;FS=0.000;HRun=0;HaplotypeScore=19.2213;InbreedingCoeff=0.4103;MQ=97.15;MQ0=3;MQRankSum=1.273;QD=5.43;ReadPosRankSum=0.667;VQSLOD=1.3001;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	./.	1/1:12,0:7:2.94:18,3,0	0/0:29,0:10:0.47:0,0,1	0/0:3,0:3:3:0,3,25	./.	./.	0/0:9,0:8:2.97:0,3,20	0/0:4,0:4:3.01:0,3,31	1/1:1,1:2:3.01:34,3,0	./.	./.	./.	./.	./.	1/1:3,1:4:3.01:34,3,0	1/1:6,8:14:15.04:170,15,0	1/1:2,0:4:5.75:43,6,0	1/1:5,0:7:5.68:28,6,0	./.	./.	./.	./.	./.	0/0:3,0:3:1.55:0,2,4	./.	./.	./.
chr10	24233298	.	T	TA	13422.93	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-8.602;DP=353;FS=6.658;HRun=0;HaplotypeScore=31.7664;InbreedingCoeff=0.9390;MQ=100.49;MQ0=0;MQRankSum=-8.560;QD=44.01;ReadPosRankSum=4.267;VQSLOD=4.3120;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,26:27:72.25:1150,72,0	1/1:0,3:3:6.02:96,6,0	0/0:25,0:25:62.57:0,63,850	0/0:15,0:15:35.26:0,35,502	1/1:0,16:16:48.16:767,48,0	1/1:0,7:7:21.07:336,21,0	1/1:0,13:13:36.12:575,36,0	1/1:0,23:23:69.14:1002,69,0	1/1:2,7:9:18.06:288,18,0	1/1:0,10:10:30.10:480,30,0	1/1:0,8:8:24.08:384,24,0	1/1:0,7:7:21.07:336,21,0	1/1:0,10:10:30.10:474,30,0	1/1:0,8:8:21.07:336,21,0	0/0:8,0:8:21.07:0,21,292	1/1:0,11:11:30.10:480,30,0	1/1:0,23:23:66.22:1046,66,0	1/1:1,7:8:18.06:287,18,0	1/1:0,14:14:42.14:672,42,0	1/1:0,15:15:42.14:671,42,0	1/1:0,21:21:60.20:958,60,0	1/1:0,9:9:24.08:384,24,0	1/1:0,6:6:15.05:240,15,0	1/1:0,12:12:33.11:527,33,0	1/1:0,8:8:24.08:384,24,0	1/1:0,20:20:60.18:929,60,0	1/1:0,11:11:24.08:384,24,0	1/1:0,6:6:15.05:240,15,0
chr10	24233868	.	AACAACACAC	A	1784.25	PASS	AB=0.854;AC=15;AF=0.268;AN=56;BaseQRankSum=-2.154;DP=513;FS=11.305;HRun=0;HaplotypeScore=131.0117;InbreedingCoeff=0.4799;MQ=40.23;MQ0=63;MQRankSum=-2.397;QD=10.81;ReadPosRankSum=3.046;VQSLOD=1.7140;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:30:19.16:0,19,538	0/0:7,0:7:15.05:0,15,258	0/0:18,0:8:18.05:0,18,212	0/0:30,0:17:45.12:0,45,531	0/0:13,0:14:17.97:0,18,201	0/0:17,0:18:25.79:0,26,456	0/0:17,0:15:15.43:0,15,191	0/0:25,0:23:48.05:0,48,623	0/1:7,6:8:31.06:174,0,31	1/1:6,10:11:9.03:237,9,0	1/1:4,7:9:12:234,12,0	0/0:20,0:18:46.39:0,46,816	0/0:13,0:12:12.51:0,13,359	0/0:22,0:21:16.24:0,16,250	0/1:11,0:11:6.97:7,0,677	1/1:3,15:17:3.73:93,4,0	0/1:4,10:13:26.26:85,0,26	0/1:11,0:6:43.09:122,0,43	1/1:5,6:11:12.02:245,12,0	1/1:10,17:22:24.08:618,24,0	0/1:29,0:20:21.94:144,0,22	0/0:10,0:7:12.83:0,13,99	0/0:16,0:15:30.12:0,30,428	0/0:31,0:24:25.62:0,26,465	0/0:19,0:16:25.23:0,25,303	0/0:22,0:21:51.19:0,51,1040	0/0:13,0:12:22.32:0,22,384	0/0:11,0:10:20.89:0,21,452
chr10	24233871	.	A	AC	1845.51	PASS	AB=0.958;AC=21;AF=0.375;AN=56;BaseQRankSum=-3.047;DP=555;FS=161.689;HRun=1;HaplotypeScore=110.2005;InbreedingCoeff=-0.4389;MQ=38.54;MQ0=73;MQRankSum=0.901;QD=4.78;ReadPosRankSum=-0.522;VQSLOD=0.2996;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:30:64.98:0,65,617	0/1:6,0:6:86.15:113,0,86	0/0:22,0:7:18.05:0,18,212	0/0:35,0:15:45.12:0,45,531	0/1:19,0:18:47.68:48,0,110	0/1:21,0:21:74.99:217,0,75	0/1:21,1:19:55.36:112,0,55	0/1:27,0:25:99:115,0,251	0/0:10,3:8:0.17:0,0,35	0/0:11,4:10:0.54:0,1,24	0/0:9,3:9:0.82:0,1,18	0/1:22,3:18:99:282,0,170	0/1:14,1:13:49.75:50,0,75	0/1:23,0:22:33.27:106,0,33	0/0:12,0:12:31.29:0,31,374	0/0:16,1:16:2.25:0,2,28	1/1:14,0:13:3.89:32,4,0	0/1:11,1:7:28.46:28,0,69	1/1:12,0:11:5.67:43,6,0	0/1:23,5:20:18.60:38,0,19	0/1:30,3:22:82.15:82,0,107	0/0:11,0:8:12.83:0,13,99	0/1:18,0:17:99:160,0,134	0/1:31,2:27:99:102,0,101	0/1:21,0:18:87.03:87,0,141	0/1:29,1:27:99:239,0,326	0/1:13,0:12:45.37:116,0,45	0/1:11,0:10:29.14:29,0,92
chr10	24233873	.	C	CAACAACA	4759.73	PASS	AB=0.794;AC=23;AF=0.411;AN=56;BaseQRankSum=-2.480;DP=567;FS=62.298;HRun=0;HaplotypeScore=144.5176;InbreedingCoeff=-0.4221;MQ=38.03;MQ0=74;MQRankSum=-4.704;QD=11.07;ReadPosRankSum=-2.650;VQSLOD=1.4447;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:32,0:30:0.53:650,1,0	0/1:5,0:6:40.33:166,0,40	0/0:22,0:6:18.06:0,18,356	0/0:33,0:12:33.11:0,33,773	0/1:9,10:19:81.70:250,0,82	0/1:12,8:21:71.75:216,0,72	0/1:9,7:19:27.13:72,0,27	0/1:28,0:26:99:482,0,108	0/0:13,0:8:9.03:0,9,176	0/1:15,0:10:4.17:4,0,89	0/1:12,0:9:1.74:2,0,62	0/1:18,1:19:85.06:425,0,85	0/1:6,5:14:15.55:250,0,16	0/1:13,13:27:92.46:99,0,92	0/0:14,0:14:9.42:0,9,527	0/1:17,0:16:3.78:4,0,43	0/0:15,0:14:8.94:0,9,93	0/1:12,0:7:55.75:56,0,114	0/0:12,0:11:11.23:0,11,133	0/0:28,0:20:12.18:0,12,319	0/1:33,0:23:18:18,0,193	1/1:6,4:8:11.34:138,11,0	0/1:15,2:17:52.62:244,0,53	0/1:25,1:27:90.34:164,0,90	0/1:8,9:17:43.43:262,0,43	0/1:17,10:29:99:759,0,231	0/1:7,3:12:70.99:149,0,71	0/1:5,4:10:25.44:349,0,25
chr10	24234349	.	G	GCTT	16564.88	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-14.108;DP=575;FS=1.026;HRun=0;HaplotypeScore=76.3354;InbreedingCoeff=0.9994;MQ=84.22;MQ0=0;MQRankSum=-5.585;QD=53.44;ReadPosRankSum=-0.501;VQSLOD=6.8212;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:54.18:0,54,865	1/1:0,9:9:27.09:595,27,0	0/0:25,0:25:63.18:0,63,947	0/0:13,0:13:36.12:0,36,565	1/1:2,32:34:93.24:1957,93,0	1/1:2,26:28:78.23:1675,78,0	1/1:3,8:11:27.09:594,27,0	1/1:7,17:24:51.16:1032,51,0	0/0:20,0:20:60.20:0,60,964	0/0:31,0:31:90.30:0,90,1413	0/0:26,0:26:72.25:0,72,1152	1/1:1,18:19:48.16:1059,48,0	1/1:2,19:22:54.19:1190,54,0	1/1:1,14:15:42.14:926,42,0	0/0:16,0:16:45.15:0,45,723	0/0:16,0:16:42.14:0,42,668	0/0:22,0:22:63.17:0,63,979	0/0:17,0:17:42.14:0,42,674	0/0:18,0:18:54.15:0,54,802	0/0:29,0:29:78.26:0,78,1229	0/0:14,0:14:42.12:0,42,650	1/1:1,12:15:35.99:654,36,0	1/1:2,16:19:42.10:879,42,0	1/1:3,11:14:27.09:596,27,0	1/1:2,20:23:57.15:1210,57,0	1/1:2,20:26:75.20:1490,75,0	1/1:4,31:36:96.33:2111,96,0	1/1:5,10:15:27.09:595,27,0
chr10	24235173	.	T	TTTG	28339.58	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-6.655;DP=563;FS=2.862;HRun=0;HaplotypeScore=97.6000;InbreedingCoeff=0.9979;MQ=90.22;MQ0=0;MQRankSum=-10.847;QD=57.72;ReadPosRankSum=5.280;VQSLOD=6.4504;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,26:28:72.25:1552,72,0	1/1:0,7:7:21.07:459,21,0	0/0:23,0:23:62.95:0,63,995	0/0:30,0:30:83.31:0,83,1355	1/1:5,24:30:72.16:1431,72,0	1/1:1,16:17:51.17:1094,51,0	1/1:2,13:15:36.12:739,36,0	1/1:3,23:27:78.25:1690,78,0	1/1:5,11:16:42.14:879,42,0	1/1:4,14:18:48.16:1052,48,0	1/1:0,15:15:39.13:851,39,0	1/1:3,23:26:63.21:1431,63,0	1/1:4,10:15:33.11:686,33,0	1/1:2,21:23:63.22:1382,63,0	0/0:19,0:19:57.19:0,57,968	1/1:2,11:13:36.12:788,36,0	1/1:1,15:16:45.15:1013,45,0	1/1:1,12:13:39.13:881,39,0	1/1:4,18:22:57.19:1234,57,0	1/1:1,19:21:54.18:1208,54,0	1/1:1,17:19:45.15:1007,45,0	1/1:3,21:25:72.25:1551,72,0	1/1:3,21:24:72.25:1571,72,0	1/1:3,29:32:48.16:1587,48,0	1/1:0,24:24:69.24:1549,69,0	1/1:4,17:21:60.14:1253,60,0	1/1:1,13:15:39.13:858,39,0	1/1:0,9:9:27.09:597,27,0
chr10	24235212	.	A	ATGTGTGTG	5215.99	PASS	AB=1.000;AC=47;AF=0.940;AN=50;BaseQRankSum=2.315;DP=650;FS=19.213;HRun=0;HaplotypeScore=266.5673;InbreedingCoeff=0.2673;MQ=59.98;MQ0=12;MQRankSum=-3.806;QD=9.66;ReadPosRankSum=-2.972;VQSLOD=2.1334;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:28:40.81:78,0,41	./.	./.	./.	1/1:25,1:26:6:143,6,0	1/1:19,0:21:9.01:164,9,0	1/1:20,0:20:6:53,6,0	1/1:23,0:23:17.70:314,18,0	1/1:18,0:18:5.98:115,6,0	1/1:31,0:30:32.12:661,32,0	1/1:13,1:14:11.89:277,12,0	1/1:27,2:29:8.92:216,9,0	1/1:22,0:21:10.34:115,10,0	1/1:22,0:22:11.98:141,12,0	0/0:20,0:22:36.09:0,36,728	1/1:18,0:21:21.06:544,21,0	1/1:24,0:25:13.59:283,14,0	1/1:14,1:16:14.41:307,14,0	1/1:25,0:24:12.50:231,12,0	1/1:26,0:25:8.64:118,9,0	1/1:18,0:17:5.95:91,6,0	1/1:20,3:23:12.02:331,12,0	1/1:23,0:23:2.99:24,3,0	1/1:28,2:30:5.87:95,6,0	1/1:22,2:24:5.92:244,6,0	1/1:28,0:28:27.46:407,27,0	1/1:15,0:15:12.02:213,12,0	1/1:9,0:9:3.01:53,3,0
chr10	24235381	.	TG	T	1541.65	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.545;DP=524;FS=11.770;HRun=1;HaplotypeScore=53.7770;InbreedingCoeff=0.9762;MQ=81.19;MQ0=0;MQRankSum=-1.378;QD=36.71;ReadPosRankSum=2.854;VQSLOD=3.1664;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,42:42:99:1637,117,0	0/0:10,0:10:30.10:0,30,479	0/0:29,0:29:87.25:0,87,1299	0/0:37,0:36:98.85:0,99,1523	0/0:10,0:10:30.09:0,30,447	0/0:15,0:15:39.13:0,39,623	0/0:19,0:19:57.18:0,57,887	0/0:30,0:30:87.27:0,87,1344	0/0:18,0:18:54.18:0,54,862	0/0:12,0:12:36.12:0,36,556	0/0:8,0:8:24.08:0,24,384	0/0:19,0:19:54.16:0,54,818	0/0:11,0:11:33.11:0,33,527	0/0:16,0:16:48.16:0,48,766	0/0:21,0:21:63.21:0,63,997	0/0:17,0:17:45.15:0,45,718	0/0:35,0:35:99:0,102,1592	0/0:16,0:16:48.13:0,48,731	0/0:22,0:22:63.19:0,63,971	0/0:13,0:13:39.13:0,39,614	0/0:36,0:36:99:0,108,1715	0/0:6,0:6:18.06:0,18,282	0/0:7,0:7:21.06:0,21,312	0/0:28,0:28:81.28:0,81,1294	0/0:6,0:6:18.06:0,18,288	0/0:20,0:20:57.19:0,57,907	0/0:11,0:11:33.11:0,33,527	0/0:10,0:10:30.10:0,30,479
chr10	24235578	.	T	TA	5844.03	PASS	AB=0.974;AC=49;AF=0.907;AN=54;BaseQRankSum=-1.894;DP=229;FS=9.952;HRun=2;HaplotypeScore=42.3267;InbreedingCoeff=0.3929;MQ=75.59;MQ0=5;MQRankSum=-2.840;QD=27.57;ReadPosRankSum=1.075;VQSLOD=3.2762;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,8:9:12.04:173,12,0	1/1:0,3:3:9.03:129,9,0	0/0:13,0:6:6.01:0,6,65	0/1:37,1:15:10.80:11,0,22	1/1:0,7:7:12.04:173,12,0	1/1:1,3:4:8.92:129,9,0	1/1:0,1:1:3.01:43,3,0	1/1:3,31:33:93.30:1310,93,0	1/1:1,3:4:12.02:152,12,0	1/1:0,6:6:18.06:259,18,0	1/1:0,2:2:6.02:86,6,0	1/1:1,3:4:9.03:129,9,0	1/1:1,5:6:18.05:242,18,0	1/1:3,1:4:9.03:123,9,0	0/0:4,0:4:9.03:0,9,112	1/1:1,2:3:6.02:83,6,0	1/1:0,22:22:53.88:753,54,0	1/1:2,10:12:27.01:388,27,0	1/1:2,9:8:21.07:302,21,0	1/1:0,1:1:3.01:43,3,0	1/1:0,2:2:6.02:86,6,0	./.	1/1:0,1:1:3.01:43,3,0	1/1:1,0:1:3.01:43,3,0	1/1:1,10:11:21.01:258,21,0	1/1:1,4:5:15.05:215,15,0	1/1:1,10:11:30.10:431,30,0	1/1:3,7:10:18.04:240,18,0
chr10	24235585	.	C	CAT	6190.06	PASS	AB=0.831;AC=40;AF=0.833;AN=48;BaseQRankSum=-2.250;DP=229;FS=3.753;HRun=0;HaplotypeScore=45.6083;InbreedingCoeff=0.4813;MQ=75.74;MQ0=5;MQRankSum=-3.455;QD=31.26;ReadPosRankSum=-0.339;VQSLOD=6.1342;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:8:12.04:0,12,153	1/1:0,3:3:9.03:137,9,0	0/0:15,0:7:8.60:0,9,84	0/1:31,0:12:12.53:13,0,33	1/1:2,3:5:6.02:85,6,0	1/1:1,4:5:9.03:152,9,0	./.	1/1:12,24:35:87.29:1434,87,0	1/1:0,4:4:12.04:203,12,0	1/1:3,5:8:21.07:354,21,0	1/1:2,1:3:9.01:121,9,0	1/1:1,4:5:9.03:153,9,0	1/1:2,4:6:15.05:254,15,0	1/1:1,5:6:6.02:102,6,0	0/0:4,0:4:12.04:0,12,156	1/1:2,0:2:3.01:50,3,0	1/1:7,14:21:11.89:672,12,0	1/1:3,9:12:27.09:458,27,0	0/1:5,4:6:23.92:186,0,24	1/1:2,1:3:9.02:123,9,0	1/1:1,1:2:3.01:51,3,0	./.	./.	./.	1/1:3,6:9:21.06:303,21,0	1/1:2,4:6:18.06:300,18,0	1/1:0,10:11:33.11:541,33,0	1/1:0,10:10:30.10:498,30,0
chr10	24237214	.	A	AT	12585.90	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-7.573;DP=490;FS=0.661;HRun=8;HaplotypeScore=43.4525;InbreedingCoeff=0.9260;MQ=71.10;MQ0=0;MQRankSum=-0.428;QD=27.97;ReadPosRankSum=1.576;VQSLOD=5.0698;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:38.99:0,39,350	1/1:1,5:7:17.89:188,18,0	0/0:8,0:8:4.24:0,4,55	0/0:4,0:4:11.49:0,11,87	1/1:2,23:25:38.70:684,39,0	1/1:1,26:27:66.11:744,66,0	1/1:0,9:9:24.07:277,24,0	1/1:6,24:30:72.18:809,72,0	1/1:2,13:15:33.10:381,33,0	1/1:0,21:22:65.98:702,66,0	1/1:3,18:21:54.16:622,54,0	1/1:1,11:12:27.08:312,27,0	1/1:0,17:17:42.12:485,42,0	1/1:1,20:21:57.17:658,57,0	0/0:13,0:13:33:0,33,297	1/1:2,14:16:39.12:450,39,0	1/1:1,13:14:27.08:311,27,0	1/1:2,5:7:15.04:166,15,0	1/1:4,24:28:72.08:778,72,0	1/1:4,22:27:68.99:767,69,0	1/1:2,6:8:15.04:173,15,0	1/1:3,12:15:11.65:388,12,0	1/1:3,17:20:45.13:519,45,0	1/1:1,7:8:21.06:242,21,0	1/1:5,23:28:66.20:762,66,0	1/1:0,30:30:90.21:1006,90,0	1/1:3,22:25:64.09:747,64,0	1/1:3,15:18:36.11:415,36,0
chr10	24237608	.	A	AGATAGATAGATG	5905.38	PASS	AB=1.000;AC=33;AF=0.611;AN=54;BaseQRankSum=2.594;DP=655;FS=3.607;HRun=0;HaplotypeScore=194.7089;InbreedingCoeff=0.0767;MQ=51.84;MQ0=11;MQRankSum=-3.076;QD=11.44;ReadPosRankSum=3.554;VQSLOD=3.8405;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:27:18.92:0,19,231	0/1:11,0:11:11.96:152,0,12	./.	0/0:18,0:3:5.96:0,6,47	0/1:31,0:31:77.24:77,0,99	0/1:23,0:23:12.96:148,0,13	0/0:9,0:9:12.41:0,12,96	0/0:53,0:49:22.02:0,22,620	1/1:26,0:26:25.53:354,26,0	1/1:5,21:31:68.70:1141,69,0	1/1:6,21:30:5.86:36,6,0	0/1:11,0:11:18.98:49,0,19	0/1:29,0:29:44.96:304,0,45	0/1:26,0:26:56.93:143,0,57	0/0:16,0:16:42.06:0,42,935	1/1:2,26:29:9.03:537,9,0	1/1:0,17:24:3.01:179,3,0	1/1:16,0:16:20.88:211,21,0	1/1:14,0:13:27.38:426,27,0	1/1:8,23:34:22.58:295,23,0	1/1:21,0:21:34.47:284,34,0	0/1:26,0:26:22.90:346,0,23	0/1:18,0:18:38.49:38,0,39	0/1:17,0:17:18.98:51,0,19	1/1:16,0:16:12.04:214,12,0	0/1:19,0:19:99:225,0,264	1/1:36,0:36:12.04:561,12,0	0/1:28,0:27:99:135,0,296
chr10	24237620	.	A	AGATAGATAGATG	7238.93	PASS	AB=1.000;AC=37;AF=0.661;AN=56;BaseQRankSum=-4.063;DP=671;FS=1.550;HRun=0;HaplotypeScore=192.9705;InbreedingCoeff=0.3508;MQ=56.54;MQ0=10;MQRankSum=-5.381;QD=13.41;ReadPosRankSum=2.021;VQSLOD=3.6576;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:17.65:0,18,209	1/1:1,0:13:9.03:249,9,0	0/0:20,0:8:19.05:0,19,153	0/0:24,0:8:14.73:0,15,129	1/1:3,0:36:29.69:312,30,0	1/1:1,0:23:9.03:249,9,0	1/1:9,0:9:2.61:157,3,0	1/1:52,0:48:99:926,118,0	0/1:25,0:25:67.20:67,0,178	0/1:26,0:26:99:388,0,280	0/0:25,0:25:11.61:0,12,111	1/1:2,0:18:3.01:83,3,0	1/1:3,0:29:18.06:495,18,0	1/1:4,0:26:12.47:264,12,0	0/0:16,0:16:42.06:0,42,933	0/1:27,0:27:13.96:417,0,14	0/1:21,0:21:16.98:135,0,17	0/1:13,0:13:2.88:3,0,136	0/1:13,0:13:26.96:27,0,125	0/1:30,0:30:69.10:69,0,218	0/0:19,0:19:33.46:0,33,276	1/1:4,0:32:21.07:543,21,0	1/1:3,0:21:2.76:75,3,0	1/1:1,0:19:3.01:83,3,0	1/1:1,0:21:12.04:327,12,0	1/1:6,13:23:50.87:795,51,0	1/1:0,33:37:12.04:709,12,0	1/1:26,0:25:65.89:868,66,0
chr10	24244977	.	T	TGG	1231.89	PASS	AB=0.903;AC=17;AF=0.531;AN=32;BaseQRankSum=-0.028;DP=280;FS=71.818;HRun=0;HaplotypeScore=22.4677;InbreedingCoeff=0.4456;MQ=33.99;MQ0=75;MQRankSum=-4.390;QD=15.59;ReadPosRankSum=-0.562;VQSLOD=0.8309;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:3:3.01:0,3,31	./.	0/0:29,2:8:11.89:0,12,166	0/0:27,0:6:18.06:0,18,293	./.	1/1:3,3:4:9.03:181,9,0	1/1:3,2:2:6.02:121,6,0	0/1:12,1:3:39.91:113,0,40	1/1:2,2:3:9.03:159,9,0	./.	./.	1/1:2,1:2:6.02:121,6,0	1/1:1,3:3:9.03:182,9,0	1/1:5,2:4:12.04:220,12,0	0/0:32,0:26:60.20:0,60,965	./.	./.	./.	0/1:8,2:4:17.94:113,0,18	./.	./.	0/0:31,0:12:18.06:0,18,255	0/0:23,0:8:15.05:0,15,243	0/1:17,1:11:36.64:37,0,318	./.	1/1:8,1:2:6.02:122,6,0	./.	./.
chr10	24245274	.	C	CA	1197.26	PASS	AC=20;AF=0.833;AN=24;BaseQRankSum=-2.374;DP=203;FS=0.000;HRun=2;HaplotypeScore=14.2240;InbreedingCoeff=0.3839;MQ=22.44;MQ0=138;MQRankSum=-2.374;QD=17.61;ReadPosRankSum=0.817;VQSLOD=3.4101;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	1/1:2,3:3:3.01:43,3,0	0/0:2,0:1:3.01:0,3,37	0/0:7,0:1:3.01:0,3,32	1/1:4,0:1:3.01:40,3,0	1/1:6,1:1:3.01:43,3,0	./.	./.	./.	1/1:5,3:3:9.03:129,9,0	1/1:1,5:4:12.04:172,12,0	./.	./.	./.	./.	./.	./.	./.	./.	1/1:4,8:9:21.07:302,21,0	./.	1/1:1,9:8:21.07:302,21,0	1/1:1,5:4:9.03:129,9,0	./.	1/1:4,2:3:6.02:86,6,0	./.	./.	1/1:1,1:1:3.01:43,3,0
chr10	24245830	.	TG	T	109.93	PASS	AC=6;AF=1.00;AN=6;DP=50;FS=0.000;HRun=1;HaplotypeScore=14.7220;MQ=9.26;MQ0=44;QD=18.32;VQSLOD=3.5406;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	./.	./.	./.	1/1:1,1:1:3.01:35,3,0	./.	./.	./.	./.	./.	1/1:0,1:1:3.01:35,3,0	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	1/1:0,3:3:9.03:105,9,0	./.
chr10	24245975	.	TA	T	104.11	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=-3.220;DP=269;FS=18.732;HRun=15;HaplotypeScore=51.6105;InbreedingCoeff=0.4721;MQ=51.75;MQ0=11;MQRankSum=1.488;QD=4.73;ReadPosRankSum=0.061;VQSLOD=0.3890;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,12:15:28.35:197,28,0	0/0:2,0:2:5.36:0,5,22	0/0:6,0:4:4.53:0,5,43	0/1:4,0:2:0.73:1,0,3	0/0:17,0:17:40.24:0,40,165	0/0:7,0:6:10.78:0,11,44	0/0:5,0:5:8.04:0,8,33	0/0:16,0:15:25.23:0,25,105	0/0:9,0:10:19.11:0,19,83	0/0:13,0:12:21.77:0,22,94	0/0:11,0:9:16.12:0,16,66	0/0:6,0:6:14.66:0,15,63	0/0:8,0:6:10.97:0,11,48	0/0:9,0:9:25.36:0,25,130	0/0:8,0:8:20.95:0,21,172	0/0:10,0:10:27.31:0,27,122	0/0:8,0:8:13.52:0,14,56	0/0:4,0:4:8.04:0,8,33	0/0:8,0:8:4.75:0,5,44	0/0:15,0:15:32.08:0,32,132	0/0:3,0:2:2.26:0,2,10	0/0:5,0:4:8.10:0,8,33	0/0:15,0:15:32.48:0,32,140	0/0:7,0:7:8.04:0,8,33	0/0:17,0:16:27.97:0,28,118	0/0:11,0:8:21.98:0,22,101	0/0:17,0:16:27.54:0,28,125	0/0:8,0:8:16.07:0,16,66
chr10	24245987	.	A	AG	5907.99	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-5.733;DP=302;FS=19.217;HRun=0;HaplotypeScore=34.0781;InbreedingCoeff=0.7249;MQ=59.09;MQ0=7;MQRankSum=2.869;QD=21.25;ReadPosRankSum=4.464;VQSLOD=4.4053;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:17:34.82:162,35,0	1/1:0,2:2:6.02:74,6,0	0/0:9,0:6:8.26:0,8,126	0/0:5,0:2:5.67:0,6,35	1/1:1,16:17:45.06:544,45,0	1/1:2,7:8:12.02:146,12,0	1/1:0,8:8:9:110,9,0	1/1:2,15:17:36.57:396,37,0	1/1:1,8:9:21.04:236,21,0	1/1:5,10:13:13.95:317,14,0	1/1:0,12:10:20.88:216,21,0	1/1:1,0:6:5.09:74,5,0	1/1:1,7:8:11.90:109,12,0	1/1:4,6:10:12.71:235,13,0	0/0:10,0:10:29.74:0,30,310	1/1:2,8:10:23.22:267,23,0	1/1:0,6:8:14.72:156,15,0	1/1:0,4:4:9.03:110,9,0	1/1:9,3:12:15.50:218,15,0	1/1:1,21:22:59.69:581,60,0	1/1:1,2:3:5.93:54,6,0	1/1:1,8:8:14.85:143,15,0	1/1:1,16:17:15.56:377,16,0	1/1:3,5:8:9.62:112,10,0	1/1:2,13:15:36.11:432,36,0	1/1:3,7:9:18.97:269,19,0	1/1:9,9:17:29.30:350,29,0	1/1:0,8:8:18.06:220,18,0
chr10	24246303	.	CA	C	19302.77	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=5.027;DP=580;FS=0.479;HRun=2;HaplotypeScore=58.0548;InbreedingCoeff=0.9975;MQ=89.94;MQ0=0;MQRankSum=-8.369;QD=37.77;ReadPosRankSum=4.967;VQSLOD=5.1325;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,28:28:75.25:1043,75,0	1/1:0,7:7:21:270,21,0	0/0:22,0:22:63.20:0,63,960	0/0:21,0:21:57.17:0,57,882	1/1:0,37:37:99:1537,111,0	1/1:0,26:26:66.22:923,66,0	1/1:0,19:19:48.16:671,48,0	1/1:0,21:21:63.20:864,63,0	1/1:0,20:20:57.19:797,57,0	1/1:0,20:20:60.20:835,60,0	1/1:0,14:14:42.14:586,42,0	1/1:1,24:25:66.22:923,66,0	1/1:0,20:20:54.18:755,54,0	1/1:0,20:20:48.16:671,48,0	0/0:26,0:26:78.27:0,78,1246	1/1:1,15:16:38.86:516,39,0	1/1:1,17:18:48.16:671,48,0	1/1:0,12:12:33.11:461,33,0	1/1:0,14:15:41.22:585,41,0	1/1:0,15:15:42.14:577,42,0	1/1:0,14:14:42.14:587,42,0	1/1:0,22:22:63.17:852,63,0	1/1:0,26:26:78.26:1090,78,0	1/1:0,13:13:30.10:419,30,0	1/1:0,34:34:87.29:1216,87,0	1/1:0,31:31:93.30:1282,93,0	1/1:0,26:26:60.20:839,60,0	1/1:0,12:12:24.08:335,24,0
chr10	24247956	.	CAA	C	11615.93	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-4.058;DP=496;FS=5.497;HRun=10;HaplotypeScore=69.4354;InbreedingCoeff=0.9267;MQ=75.04;MQ0=0;MQRankSum=-2.112;QD=27.14;ReadPosRankSum=3.261;VQSLOD=5.0212;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:2,0:20:43.50:0,44,475	1/1:3,7:10:21.05:234,21,0	0/0:17,1:17:6.05:0,6,347	0/0:14,0:13:5.50:0,5,187	1/1:5,35:40:93.22:1037,93,0	1/1:4,13:17:30.07:334,30,0	1/1:0,15:15:36.10:401,36,0	1/1:7,29:36:87.17:951,87,0	1/1:1,15:16:42.11:468,42,0	1/1:2,18:20:54.14:601,54,0	1/1:4,17:21:48.12:535,48,0	1/1:0,14:14:36.10:401,36,0	1/1:2,18:20:48.13:535,48,0	1/1:4,9:13:14.75:225,15,0	0/0:16,0:16:45.14:0,45,694	1/1:1,16:17:39.10:435,39,0	1/1:1,9:10:27.07:295,27,0	1/1:0,10:10:30.08:334,30,0	1/1:4,13:17:36.07:392,36,0	1/1:3,25:29:77.69:845,78,0	1/1:0,7:7:21.06:234,21,0	1/1:0,8:8:24.06:268,24,0	1/1:2,12:14:33.09:368,33,0	1/1:1,7:8:21.06:234,21,0	1/1:3,18:21:51.13:569,51,0	1/1:1,18:19:54.11:581,54,0	1/1:5,26:31:75.19:836,75,0	1/1:0,15:15:45.12:501,45,0
chr10	24249443	.	TTTCTAA	T	10010.94	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=16.536;DP=684;FS=3.452;HRun=0;HaplotypeScore=149.2136;InbreedingCoeff=0.9934;MQ=62.53;MQ0=0;MQRankSum=-16.055;QD=51.34;ReadPosRankSum=2.882;VQSLOD=5.0762;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,111,3651	0/0:12,0:12:33.11:0,33,1157	0/0:31,0:31:87.28:0,87,2728	0/0:25,0:25:69.24:0,69,2238	0/0:30,0:30:81.28:0,81,2808	0/0:20,0:20:57.20:0,57,1939	0/0:20,0:20:60.20:0,60,1877	0/0:27,0:27:66.23:0,66,2218	1/1:2,24:26:63.22:1446,63,0	1/1:3,40:43:99:2688,123,0	1/1:1,17:18:39.09:843,39,0	0/0:25,0:25:69.23:0,69,2309	0/0:27,0:27:75.26:0,75,2586	0/0:25,0:25:75.26:0,75,2577	0/0:30,0:30:87.30:0,87,2958	1/1:2,26:28:69.07:1586,69,0	1/1:2,12:14:21.07:483,21,0	1/1:3,4:7:11.99:276,12,0	1/1:4,10:13:23.98:348,24,0	1/1:3,25:28:72.25:1652,72,0	1/1:3,14:17:30.10:688,30,0	0/0:38,0:38:99:0,111,3761	0/0:27,0:27:75.26:0,75,2531	0/0:23,0:23:45.15:0,45,1465	0/0:18,0:18:51.17:0,51,1678	0/0:35,0:35:96.33:0,96,3366	0/0:30,0:30:84.29:0,84,2742	0/0:9,0:9:21.07:0,21,733
chr10	24250136	.	C	CT	184.13	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-3.718;DP=568;FS=0.000;HRun=5;HaplotypeScore=61.7483;InbreedingCoeff=0.9731;MQ=73.34;MQ0=0;MQRankSum=-2.500;QD=23.02;ReadPosRankSum=-0.814;VQSLOD=2.3115;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,8:8:21.07:276,21,0	0/0:19,0:19:57.10:0,57,593	0/0:12,0:12:21.04:0,21,217	0/0:13,0:13:35.52:0,36,341	0/0:43,0:43:99:0,120,1281	0/0:31,0:31:84.21:0,84,902	0/0:11,0:11:33.08:0,33,355	0/0:32,0:32:87.19:0,87,909	0/0:17,0:17:48.12:0,48,515	0/0:30,0:30:87.18:0,87,918	0/0:24,0:24:63.16:0,63,677	0/0:18,0:18:45.11:0,45,483	0/0:33,0:33:90.19:0,90,951	0/0:13,0:13:30.07:0,30,322	0/0:22,0:22:63.16:0,63,677	0/0:16,0:16:48.12:0,48,515	0/0:14,0:14:42.11:0,42,450	0/0:5,0:5:15.04:0,15,161	0/0:17,0:17:42.10:0,42,450	0/0:28,0:28:84.21:0,84,903	0/0:20,0:20:57.14:0,57,613	0/0:16,0:16:45.11:0,45,483	0/0:20,0:20:54.14:0,54,580	0/0:8,0:8:24.06:0,24,258	0/0:27,0:26:75.19:0,75,806	0/0:25,0:25:63.15:0,63,677	0/0:36,0:36:87.17:0,87,915	0/0:10,0:10:30.08:0,30,322
chr10	24252853	.	A	AG	14338.86	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-7.357;DP=497;FS=7.870;HRun=5;HaplotypeScore=43.8367;InbreedingCoeff=0.9677;MQ=62.06;MQ0=5;MQRankSum=-0.482;QD=32.08;ReadPosRankSum=3.304;VQSLOD=5.0903;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,32:34:83.86:1174,84,0	1/1:1,5:6:15.05:197,15,0	0/0:19,0:12:32.93:0,33,314	0/0:14,0:11:29.98:0,30,283	1/1:0,21:21:57.19:749,57,0	1/1:2,13:15:33.11:434,33,0	1/1:3,16:19:45.15:586,45,0	1/1:5,17:20:45.15:591,45,0	1/1:0,12:12:27.09:355,27,0	1/1:0,11:11:33.09:419,33,0	1/1:2,12:14:39.10:496,39,0	1/1:2,15:17:36.12:474,36,0	1/1:0,13:13:39.13:513,39,0	1/1:0,19:19:36.12:474,36,0	0/0:17,0:17:51.13:0,51,546	1/1:2,12:14:33.11:434,33,0	1/1:1,30:31:81.26:1066,81,0	1/1:0,24:24:66.21:868,66,0	1/1:3,14:16:42.14:545,42,0	1/1:4,16:19:45.15:592,45,0	1/1:4,27:30:54.18:711,54,0	1/1:1,5:6:15.05:197,15,0	1/1:0,17:17:44.98:592,45,0	1/1:3,20:23:66.20:854,66,0	1/1:2,17:19:45.15:592,45,0	1/1:1,19:20:57.08:678,57,0	1/1:2,17:19:48.16:630,48,0	1/1:0,3:3:9.03:118,9,0
chr10	24255766	.	CT	C	209.40	PASS	AB=0.974;AC=4;AF=0.071;AN=56;BaseQRankSum=5.443;DP=609;FS=3.585;HRun=10;HaplotypeScore=65.3522;InbreedingCoeff=0.4396;MQ=82.76;MQ0=1;MQRankSum=1.425;QD=3.32;ReadPosRankSum=-0.033;VQSLOD=-0.4936;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:5,12:17:32.99:286,33,0	0/0:8,0:8:21.06:0,21,232	0/1:34,2:31:25.01:25,0,215	0/0:21,0:20:14.49:0,14,150	0/0:35,0:36:87.06:0,87,936	0/0:21,1:24:33.77:0,34,566	0/0:13,1:14:7:0,7,293	0/0:28,2:30:23.71:0,24,681	0/0:23,0:23:57.14:0,57,622	0/0:19,0:19:23.83:0,24,473	0/0:22,0:22:63.16:0,63,690	0/0:18,0:19:50.95:0,51,535	0/0:20,0:20:51.06:0,51,525	0/0:21,0:21:52.94:0,53,560	0/0:24,0:24:57.13:0,57,614	0/0:25,0:25:69.14:0,69,743	0/0:17,1:19:39.14:0,39,492	0/0:9,0:9:17.88:0,18,180	0/0:20,0:20:35.98:0,36,442	0/0:28,0:28:60.15:0,60,655	0/0:13,0:13:27.07:0,27,299	0/0:23,1:25:45.97:0,46,711	0/0:23,1:25:45.97:0,46,711	0/0:16,0:17:41.95:0,42,446	0/0:24,0:24:69:0,69,731	0/0:30,0:30:49.12:0,49,753	0/0:28,1:29:46.10:0,46,706	0/1:9,0:9:10.73:11,0,118
chr10	24256172	.	T	TTCTC	3417.52	PASS	AB=0.860;AC=27;AF=0.519;AN=52;BaseQRankSum=-6.102;DP=629;FS=10.238;HRun=0;HaplotypeScore=139.7543;InbreedingCoeff=0.2521;MQ=62.38;MQ0=12;MQRankSum=-1.408;QD=8.42;ReadPosRankSum=-1.959;VQSLOD=1.5827;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:23,5:30:20.50:383,21,0	0/1:7,2:10:24.70:242,0,25	./.	./.	0/1:31,3:37:22.89:318,0,23	1/1:18,6:24:8.77:153,9,0	0/1:12,6:19:21.91:64,0,22	1/1:28,0:26:8.98:99,9,0	0/0:9,0:21:27.01:0,27,243	0/0:14,0:22:15.43:0,15,137	0/0:17,0:22:9.01:0,9,84	1/1:10,5:17:17.53:305,18,0	1/1:15,5:23:15.78:255,16,0	0/1:17,5:24:34.43:143,0,34	0/0:20,0:24:21.04:0,21,251	0/0:19,0:22:7.42:0,7,105	0/1:17,0:25:4.12:4,0,97	0/1:9,0:11:39.61:79,0,40	0/0:15,0:20:10.26:0,10,86	0/0:19,0:24:14.69:0,15,137	0/0:12,0:21:21.02:0,21,195	0/1:17,5:24:27.48:265,0,27	1/1:18,5:25:8.77:153,9,0	1/1:11,6:18:8.77:153,9,0	0/1:18,1:21:41.51:321,0,42	0/1:30,1:32:0.91:327,0,1	1/1:14,8:24:6.49:141,6,0	1/1:10,0:8:2.74:12,3,0
chr10	24257746	.	GATATGTATATGTATATGT	G	1066.98	PASS	AB=1.000;AC=20;AF=0.769;AN=26;BaseQRankSum=2.822;DP=297;FS=1.561;HRun=0;HaplotypeScore=132.1161;InbreedingCoeff=0.5603;MQ=70.27;MQ0=9;MQRankSum=-0.293;QD=7.31;ReadPosRankSum=-0.384;VQSLOD=2.2422;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:12.03:0,12,328	./.	./.	./.	0/1:15,0:15:0:0,0,0	./.	1/1:6,0:6:0.47:1,0,0	./.	1/1:6,0:6:11.90:170,12,0	1/1:10,0:10:2.96:19,3,0	1/1:8,3:11:6.02:74,6,0	./.	./.	./.	0/0:9,0:9:12.01:0,12,514	./.	1/1:18,0:18:8.98:86,9,0	1/1:17,0:16:11:182,11,0	1/1:14,6:18:18.06:538,18,0	./.	./.	./.	./.	./.	0/1:5,0:5:0:0,0,0	1/1:25,0:24:5.93:72,6,0	1/1:13,0:12:3:26,3,0	./.
chr10	24257833	.	C	CAT	6139.66	PASS	AB=1.000;AC=29;AF=0.558;AN=52;BaseQRankSum=-6.856;DP=290;FS=0.524;HRun=0;HaplotypeScore=50.4687;InbreedingCoeff=0.8217;MQ=58.92;MQ0=3;MQRankSum=0.842;QD=34.30;ReadPosRankSum=-0.402;VQSLOD=6.5235;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,1:19:35.75:307,36,0	1/1:0,2:2:6.02:100,6,0	0/1:8,0:2:0:0,0,0	0/0:10,0:3:2.22:0,2,7	1/1:1,19:20:47.87:800,48,0	1/1:1,11:11:33.11:547,33,0	1/1:1,3:4:6.02:100,6,0	1/1:14,28:41:87.29:1429,87,0	0/0:3,0:3:9.03:0,9,115	0/0:8,0:8:24.08:0,24,306	0/0:7,0:7:15.05:0,15,191	1/1:0,8:8:24.08:384,24,0	1/1:0,4:4:6.02:85,6,0	1/1:0,1:1:3.01:50,3,0	0/0:12,0:12:30.10:0,30,382	0/0:4,0:4:9.03:0,9,115	0/0:17,0:17:39.80:0,40,491	0/0:16,0:16:36.05:0,36,435	0/0:21,0:20:48.15:0,48,600	0/0:8,0:8:21.07:0,21,267	0/0:5,0:4:12.04:0,12,149	./.	./.	1/1:0,1:1:3.01:50,3,0	1/1:0,5:5:15.05:251,15,0	1/1:0,17:17:51.17:847,51,0	1/1:1,15:16:42.14:687,42,0	1/1:7,12:19:30.10:500,30,0
chr10	24258296	.	C	CA	4552.02	PASS	AB=0.668;AC=47;AF=0.839;AN=56;BaseQRankSum=-1.009;DP=376;FS=7.811;HRun=11;HaplotypeScore=54.6819;InbreedingCoeff=0.3754;MQ=59.20;MQ0=8;MQRankSum=-1.053;QD=12.54;ReadPosRankSum=1.708;VQSLOD=4.1852;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:9,15:24:12.08:411,0,12	1/1:2,0:6:11.87:58,12,0	0/0:5,0:5:5.72:0,6,46	0/0:3,0:2:2.99:0,3,23	1/1:4,2:15:28.69:164,29,0	1/1:1,0:8:19.89:100,20,0	1/1:6,0:12:11.83:58,12,0	1/1:9,5:28:57.31:360,57,0	1/1:3,8:11:0.82:189,1,0	1/1:7,18:26:50.87:476,51,0	1/1:4,12:18:38.71:353,39,0	1/1:1,0:5:11.36:57,11,0	1/1:6,0:14:6.92:32,7,0	1/1:9,2:16:33.05:202,33,0	0/0:5,0:5:8.96:0,9,70	0/1:6,5:11:19.63:77,0,20	1/1:3,17:20:45.08:451,45,0	1/1:7,7:14:21.04:213,21,0	1/1:5,11:14:33.54:336,34,0	0/1:8,6:12:22.22:146,0,22	1/1:3,2:5:3.48:31,3,0	1/1:5,0:9:11.96:63,12,0	1/1:6,0:14:11.02:52,11,0	1/1:3,0:10:12.45:56,12,0	1/1:8,3:17:28.35:193,28,0	1/1:4,4:22:49.18:316,49,0	1/1:7,1:16:16.89:99,17,0	1/1:1,1:7:11.36:57,11,0
chr10	24258619	.	C	CA	12843.50	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=3.734;DP=421;FS=17.352;HRun=3;HaplotypeScore=69.6086;InbreedingCoeff=0.9653;MQ=76.85;MQ0=0;MQRankSum=-3.644;QD=33.62;ReadPosRankSum=3.071;VQSLOD=3.3377;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,21:23:63.21:833,63,0	1/1:0,10:10:27.03:327,27,0	0/0:13,0:13:27.01:0,27,305	0/0:5,0:5:15.05:0,15,178	1/1:2,23:25:55.35:797,55,0	1/1:1,20:21:53.34:783,53,0	1/1:2,10:12:27.09:355,27,0	1/1:3,22:25:66.18:826,66,0	1/1:1,13:14:33.11:436,33,0	1/1:0,18:18:54.07:659,54,0	1/1:2,18:20:49.36:615,49,0	1/1:2,14:16:39.13:517,39,0	1/1:2,16:19:51.17:665,51,0	1/1:0,12:12:30.10:396,30,0	0/0:21,0:21:57.17:0,57,684	1/1:1,8:9:21.07:277,21,0	1/1:1,15:16:45.15:593,45,0	1/1:0,11:12:33.11:436,33,0	1/1:3,10:13:30.08:379,30,0	1/1:4,16:20:45.15:595,45,0	1/1:0,10:10:24.08:317,24,0	1/1:0,3:3:9.03:119,9,0	1/1:0,10:10:27.09:356,27,0	1/1:1,7:8:18.06:237,18,0	1/1:0,11:11:30.10:396,30,0	1/1:1,18:19:54.16:694,54,0	1/1:2,27:29:75.05:990,75,0	1/1:1,6:7:20.55:247,21,0
chr10	24258967	.	TCA	T	1164.15	PASS	AB=0.879;AC=33;AF=0.750;AN=44;BaseQRankSum=1.070;DP=440;FS=0.000;HRun=0;HaplotypeScore=55.8105;InbreedingCoeff=-0.0411;MQ=72.58;MQ0=6;MQRankSum=0.279;QD=3.89;ReadPosRankSum=0.396;VQSLOD=1.2578;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:11.05:0,11,110	./.	./.	./.	0/1:22,1:23:13.31:106,0,13	0/1:17,0:17:10.99:84,0,11	1/1:6,1:8:5.85:46,6,0	./.	1/1:11,3:14:3.01:32,3,0	./.	1/1:7,3:10:6.01:62,6,0	1/1:7,4:11:9.02:96,9,0	0/1:14,1:17:29.37:77,0,29	1/1:13,1:15:5.84:46,6,0	0/0:14,0:15:15.04:0,15,191	1/1:15,1:16:5.75:44,6,0	1/1:4,4:8:12.03:128,12,0	0/1:12,5:17:27.42:55,0,27	1/1:6,2:8:3:32,3,0	0/1:16,2:18:35.06:55,0,35	1/1:18,0:18:3.01:32,3,0	1/1:9,0:11:2.84:14,3,0	./.	1/1:19,10:29:21.05:223,21,0	1/1:11,0:13:2.84:14,3,0	1/1:18,2:20:5.15:62,5,0	0/1:11,4:15:32.22:66,0,32	0/1:9,1:10:13.57:26,0,14
chr10	24259286	.	A	AT	461.27	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=-1.576;DP=499;FS=0.000;HRun=5;HaplotypeScore=69.5061;InbreedingCoeff=0.6579;MQ=76.40;MQ0=0;MQRankSum=-1.303;QD=15.91;ReadPosRankSum=1.378;VQSLOD=3.0553;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,19:19:42.14:553,42,0	0/0:10,0:10:30.08:0,30,322	0/0:13,0:13:39.09:0,39,414	0/1:10,0:10:12.21:12,0,134	0/0:30,0:30:81.18:0,81,859	0/0:20,0:20:57.08:0,57,597	0/0:25,0:25:75.17:0,75,797	0/0:25,0:25:66.12:0,66,681	0/0:13,0:13:36.08:0,36,379	0/0:17,0:17:42.10:0,42,449	0/0:23,0:23:63.16:0,63,677	0/0:13,0:13:33.08:0,33,354	0/0:13,0:13:39.01:0,39,376	0/0:18,0:18:51.09:0,51,536	0/0:14,0:14:42.11:0,42,451	0/0:12,0:11:33.06:0,33,340	0/0:23,0:23:59.75:0,60,595	0/0:8,0:8:21.01:0,21,213	0/0:26,0:26:66.16:0,66,709	0/0:29,0:29:87.18:0,87,912	0/0:14,0:14:42.06:0,42,431	0/0:13,0:13:39.08:0,39,411	0/0:25,0:25:72.15:0,72,756	0/0:11,0:11:33.04:0,33,336	0/0:19,0:19:54.14:0,54,580	0/0:15,0:15:42.11:0,42,451	0/0:33,0:33:99:0,99,1038	0/0:8,0:8:24.06:0,24,258
chr10	24259932	.	T	TA	8697.47	PASS	AB=1.000;AC=33;AF=0.589;AN=56;BaseQRankSum=-14.163;DP=438;FS=7.746;HRun=7;HaplotypeScore=36.0487;InbreedingCoeff=0.9499;MQ=63.50;MQ0=0;MQRankSum=1.865;QD=31.40;ReadPosRankSum=1.848;VQSLOD=4.5294;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,13:15:33.10:399,33,0	1/1:0,8:8:24.07:290,24,0	0/1:2,0:2:1.72:8,0,2	0/0:6,0:6:13.26:0,13,118	1/1:1,31:32:90.21:1067,90,0	1/1:4,16:20:42.09:491,42,0	1/1:0,5:5:15.05:181,15,0	1/1:2,25:27:75.15:854,75,0	0/0:12,0:12:30.03:0,30,283	0/0:14,0:14:39.06:0,39,377	0/0:28,0:28:78.11:0,78,747	1/1:0,10:10:30.09:362,30,0	1/1:0,16:16:42.13:507,42,0	1/1:0,10:10:24.07:290,24,0	0/0:22,0:22:57.07:0,57,544	0/0:13,0:13:33.04:0,33,313	0/0:13,0:13:33.03:0,33,311	0/0:10,0:10:24.04:0,24,232	0/0:17,0:17:51.07:0,51,488	0/0:18,0:18:45.07:0,45,434	0/0:8,0:8:21.02:0,21,199	1/1:1,5:6:15.05:181,15,0	1/1:0,22:22:63.19:761,63,0	1/1:1,11:12:30.09:362,30,0	1/1:3,26:29:72.22:870,72,0	1/1:2,20:22:34.22:696,34,0	1/1:0,25:25:72.22:870,72,0	1/1:2,14:16:42.13:507,42,0
chr10	24260330	.	CATATATAT	C	13466.70	PASS	AB=0.571;AC=33;AF=0.589;AN=56;BaseQRankSum=-8.126;DP=455;FS=5.198;HRun=0;HaplotypeScore=162.6343;InbreedingCoeff=0.8410;MQ=65.34;MQ0=1;MQRankSum=-10.808;QD=43.30;ReadPosRankSum=-0.817;VQSLOD=3.9272;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,0:15:8.63:46,9,0	1/1:2,8:10:18.06:437,18,0	0/0:12,0:10:5.61:0,6,62	0/0:14,0:9:1.84:0,2,6	1/1:9,33:42:57.20:1514,57,0	1/1:0,10:10:27.09:718,27,0	1/1:3,13:16:24.08:594,24,0	1/1:13,18:31:54.18:1316,54,0	0/0:2,0:7:14.94:0,15,142	0/0:5,0:22:63:0,63,627	0/0:4,0:13:23.97:0,24,201	1/1:2,14:16:36.12:947,36,0	1/1:2,17:19:36.12:957,36,0	1/1:1,13:14:30.10:797,30,0	0/0:6,0:6:15.05:0,15,553	0/0:3,0:16:29.87:0,30,243	0/0:5,0:18:32.75:0,33,259	0/0:4,0:14:29.98:0,30,277	0/1:2,0:8:12.92:13,0,83	0/0:5,0:18:35.95:0,36,323	0/0:1,0:4:5.99:0,6,50	1/1:1,10:11:21.07:558,21,0	1/1:6,27:33:54.66:1434,55,0	1/1:3,10:13:6.49:160,6,0	1/1:5,18:23:36.12:957,36,0	1/1:1,10:11:30.10:797,30,0	1/1:3,29:32:72.25:1908,72,0	1/1:4,3:7:18.01:312,18,0
chr10	24260995	.	C	CT	10385.97	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=-11.411;DP=483;FS=0.000;HRun=2;HaplotypeScore=43.5610;InbreedingCoeff=0.9958;MQ=89.71;MQ0=0;MQRankSum=-1.379;QD=35.33;ReadPosRankSum=3.129;VQSLOD=4.8459;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,37:38:90.30:1295,90,0	1/1:0,6:6:18.06:259,18,0	0/0:24,0:24:25.21:0,25,586	0/0:14,0:14:33.10:0,33,407	1/1:1,16:17:45.04:599,45,0	1/1:0,16:16:48.16:691,48,0	1/1:2,9:11:21.07:302,21,0	1/1:11,41:52:99:1577,117,0	0/0:8,0:8:24.06:0,24,284	0/0:18,0:18:54.15:0,54,641	0/0:11,0:11:30.09:0,30,372	1/1:0,16:16:45.15:648,45,0	1/1:0,20:20:60.20:858,60,0	1/1:0,17:17:39.13:560,39,0	0/0:15,0:15:45.12:0,45,532	0/0:15,0:15:42.09:0,42,483	0/0:19,0:19:54.15:0,54,654	0/0:15,0:15:45.10:0,45,540	0/0:26,0:26:75.19:0,75,890	0/0:13,0:13:39.11:0,39,469	0/0:11,0:11:30.09:0,30,372	1/1:1,10:11:27.09:389,27,0	1/1:0,7:7:18.06:259,18,0	1/1:2,8:10:24.08:345,24,0	1/1:1,19:20:51.17:733,51,0	1/1:5,18:23:54.16:758,54,0	1/1:0,21:21:54.18:767,54,0	1/1:0,9:9:24.08:345,24,0
chr10	24261088	.	C	CAT	7088.09	PASS	AB=1.000;AC=33;AF=0.589;AN=56;BaseQRankSum=-7.405;DP=362;FS=28.135;HRun=0;HaplotypeScore=70.1116;InbreedingCoeff=0.8416;MQ=110.85;MQ0=2;MQRankSum=-3.108;QD=33.12;ReadPosRankSum=2.593;VQSLOD=3.9749;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,12:18:36.12:607,36,0	1/1:0,3:3:9.03:152,9,0	0/1:20,0:19:7.99:8,0,119	0/0:47,0:40:65.77:0,66,655	1/1:4,14:18:45.15:752,45,0	1/1:1,15:16:39.13:657,39,0	1/1:1,4:6:12.04:202,12,0	1/1:8,31:41:99:1526,99,0	0/0:4,0:4:9.03:0,9,116	0/0:8,0:8:18.06:0,18,232	0/0:7,0:7:21.06:0,21,256	1/1:1,5:6:15.05:253,15,0	1/1:1,7:8:15.05:253,15,0	1/1:1,6:7:18.06:303,18,0	0/0:11,0:11:18.04:0,18,218	0/0:7,0:7:21.06:0,21,257	0/0:13,0:13:33.11:0,33,424	0/0:10,0:10:24.08:0,24,309	0/0:12,0:12:27.09:0,27,348	0/0:20,0:20:57.17:0,57,720	0/0:9,0:9:27.09:0,27,347	1/1:4,2:6:12.02:152,12,0	1/1:2,9:11:27.09:456,27,0	1/1:1,2:3:3.01:51,3,0	1/1:6,11:17:33.11:554,33,0	1/1:5,7:12:24.08:404,24,0	1/1:4,10:15:0.50:509,1,0	1/1:1,4:6:15.05:249,15,0
chr10	24261157	.	C	CACACACAT	2001.22	PASS	AB=1.000;AC=13;AF=0.325;AN=40;BaseQRankSum=3.378;DP=217;FS=17.364;HRun=0;HaplotypeScore=85.2258;InbreedingCoeff=0.5371;MQ=43.19;MQ0=9;MQRankSum=-5.663;QD=22.49;ReadPosRankSum=-3.385;VQSLOD=0.0794;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:7:0:0,0,0	./.	1/1:1,0:1:0.47:1,0,0	./.	0/0:6,6:13:0:0,0,0	1/1:7,4:13:2.60:121,3,0	0/0:6,0:6:3.01:0,3,83	0/1:31,0:38:92.96:928,0,93	0/0:1,0:1:3.01:0,3,34	0/0:4,0:4:12.03:0,12,177	0/0:4,0:4:9.03:0,9,159	./.	1/1:4,4:9:5.93:133,6,0	./.	0/0:4,0:4:12.03:0,12,263	0/0:2,0:2:6.02:0,6,109	0/0:21,0:18:35.77:0,36,489	0/0:14,0:13:36.11:0,36,606	0/0:5,0:3:9:0,9,104	0/0:10,0:10:27.05:0,27,361	0/0:3,0:3:9.03:0,9,140	./.	./.	./.	./.	1/1:4,2:6:18.01:462,18,0	1/1:7,5:13:17.32:464,17,0	1/1:3,0:2:2.99:24,3,0
chr10	24263269	.	A	AACACAC	11308.51	PASS	AB=0.767;AC=47;AF=0.839;AN=56;BaseQRankSum=0.052;DP=683;FS=10.967;HRun=0;HaplotypeScore=168.5857;InbreedingCoeff=0.5439;MQ=53.55;MQ0=8;MQRankSum=-6.847;QD=19.46;ReadPosRankSum=-2.991;VQSLOD=3.1727;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:29:7.18:0,7,271	1/1:3,7:10:14.72:317,15,0	0/1:32,0:21:0.90:1,0,13	0/0:38,0:22:12.04:0,12,227	1/1:12,17:35:32.70:605,33,0	1/1:5,11:20:23.29:514,23,0	0/1:11,7:20:9.93:239,0,10	1/1:26,0:25:37.92:403,38,0	1/1:2,0:18:20.26:268,20,0	1/1:13,2:17:27.04:538,27,0	1/1:5,3:17:8.93:143,9,0	1/1:7,14:22:23.65:594,24,0	1/1:10,16:34:39.10:971,39,0	1/1:4,11:19:22.78:463,23,0	0/0:29,0:31:75.20:0,75,1409	0/1:8,4:22:9.47:583,0,9	1/1:23,1:26:36.06:609,36,0	1/1:3,0:9:3.01:39,3,0	1/1:6,2:17:38.76:680,39,0	1/1:3,2:26:30.10:447,30,0	1/1:8,15:29:2.94:55,3,0	1/1:5,16:28:22.45:528,22,0	1/1:6,15:24:22.74:524,23,0	1/1:13,2:28:6.02:77,6,0	1/1:10,16:34:39:922,39,0	1/1:9,13:28:44.32:1045,44,0	1/1:12,12:27:28.27:611,28,0	1/1:7,4:10:5.97:134,6,0
chr10	24266380	.	A	AACACAC	1017.26	PASS	AB=1.000;AC=19;AF=0.380;AN=50;BaseQRankSum=-2.276;DP=368;FS=14.015;HRun=0;HaplotypeScore=106.4744;InbreedingCoeff=0.5092;MQ=58.19;MQ0=11;MQRankSum=-3.042;QD=6.17;ReadPosRankSum=-3.707;VQSLOD=-0.3576;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:4,0:4:6.02:0,6,86	./.	./.	0/0:18,0:17:6:0,6,64	0/0:16,0:16:11.66:0,12,147	0/0:17,0:17:6.02:0,6,98	0/1:16,0:16:0:0,0,0	1/1:14,1:15:3.01:41,3,0	1/1:16,0:16:28.89:434,29,0	0/1:18,0:18:0:0,0,0	0/0:11,0:10:5.49:0,5,104	0/0:12,0:11:9.02:0,9,134	0/0:12,0:12:3.47:0,3,27	0/0:10,0:10:12.04:0,12,221	1/1:13,11:25:4.73:68,5,0	1/1:20,0:19:6.96:135,7,0	1/1:12,0:12:9.03:180,9,0	1/1:6,1:7:3.01:81,3,0	1/1:18,0:18:6:92,6,0	1/1:10,0:10:6.02:123,6,0	0/0:8,0:8:3.01:0,3,60	0/0:11,0:13:3.90:0,4,57	0/0:6,0:5:0:0,0,0	0/1:7,0:8:14.59:15,0,128	0/0:11,0:11:15.05:0,15,262	0/0:10,0:11:18.01:0,18,259	0/0:7,0:6:3.01:0,3,59
chr10	24266424	.	C	CAGAGAG	4459.30	PASS	AB=1.000;AC=44;AF=0.786;AN=56;BaseQRankSum=5.795;DP=491;FS=28.671;HRun=0;HaplotypeScore=145.3831;InbreedingCoeff=0.5300;MQ=35.30;MQ0=22;MQRankSum=-1.919;QD=11.35;ReadPosRankSum=0.620;VQSLOD=2.3759;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:7,0:5:0:1,0,0	1/1:6,0:6:5.91:46,6,0	0/0:22,0:5:12:0,12,199	0/0:27,0:7:18.06:0,18,366	1/1:14,0:12:5.99:77,6,0	1/1:15,0:13:5.88:49,6,0	0/0:18,0:15:0.47:0,0,96	1/1:25,0:18:35.74:364,36,0	1/1:15,0:15:9.03:204,9,0	1/1:11,12:32:60.59:991,61,0	1/1:24,0:24:9.02:148,9,0	0/1:22,0:20:7.89:8,0,66	1/1:17,0:15:26.83:312,27,0	1/1:18,0:17:9.03:157,9,0	0/0:20,0:19:28.87:0,29,614	1/1:23,0:23:8.94:454,9,0	1/1:10,0:16:9.87:114,10,0	1/1:11,0:11:14.98:291,15,0	1/1:13,0:12:20.98:262,21,0	1/1:13,10:27:2.04:6,2,0	1/1:11,0:10:8.98:222,9,0	1/1:16,0:14:2.96:41,3,0	1/1:21,0:20:2.83:15,3,0	0/0:11,0:9:0:0,0,0	1/1:21,0:21:5.13:47,5,0	1/1:12,0:12:23.92:244,24,0	1/1:18,0:16:26.31:339,26,0	1/1:8,0:7:5.97:69,6,0
chr10	24266450	.	G	GGGAGGGAT	3992.25	PASS	AB=1.000;AC=34;AF=0.607;AN=56;BaseQRankSum=1.559;DP=457;FS=3.478;HRun=0;HaplotypeScore=133.2978;InbreedingCoeff=0.2089;MQ=54.79;MQ0=11;MQRankSum=-4.235;QD=12.28;ReadPosRankSum=0.741;VQSLOD=2.7594;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:9,0:8:16.03:66,0,16	1/1:7,0:7:8.76:137,9,0	0/0:36,0:20:50.60:0,51,808	0/0:29,0:11:15.22:0,15,565	0/1:15,0:13:2.28:44,0,2	1/1:14,0:13:2.94:18,3,0	0/1:14,0:13:14.94:30,0,15	0/1:30,0:25:17.61:819,0,18	0/1:13,0:13:16.96:17,0,211	0/1:31,0:31:99:196,0,544	0/0:22,0:21:29.83:0,30,390	1/1:21,0:20:5.60:74,6,0	1/1:13,0:12:11.92:412,12,0	1/1:18,0:18:15.83:397,16,0	0/0:15,0:15:45.13:0,45,1065	0/1:15,0:15:98.86:99,0,170	0/1:13,0:13:3.16:3,0,141	0/1:7,0:7:7.98:8,0,116	0/0:14,0:13:6.98:0,7,306	0/0:16,0:16:17.92:0,18,224	0/1:11,0:10:21.81:22,0,78	1/1:15,0:13:5.94:172,6,0	1/1:18,0:18:11.90:105,12,0	1/1:8,3:14:0.45:1,0,0	1/1:16,0:16:17.73:336,18,0	1/1:6,3:12:7.79:416,8,0	1/1:13,0:12:11.85:350,12,0	1/1:6,0:6:18.01:270,18,0
chr10	24266455	.	G	GGATGGAGA	5414.82	PASS	AB=0.867;AC=31;AF=0.554;AN=56;BaseQRankSum=-4.605;DP=462;FS=0.000;HRun=0;HaplotypeScore=132.5574;InbreedingCoeff=0.6948;MQ=61.85;MQ0=9;MQRankSum=-5.111;QD=19.34;ReadPosRankSum=-1.499;VQSLOD=3.5116;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:10,0:9:0.24:53,0,0	1/1:7,0:8:11.92:224,12,0	0/0:29,0:21:57.65:0,58,1007	0/0:24,0:13:31.81:0,32,635	1/1:6,7:12:5.97:87,6,0	1/1:8,6:17:3:37,3,0	0/1:5,7:15:14.94:49,0,15	1/1:11,17:29:9.91:1357,10,0	0/0:14,0:14:30.06:0,30,401	0/1:31,0:31:81.69:82,0,793	0/0:23,0:22:44.37:0,44,581	1/1:9,10:21:5.77:110,6,0	1/1:2,8:13:11.92:484,12,0	1/1:6,10:19:15.04:485,15,0	0/0:16,0:16:48.16:0,48,1235	0/0:16,0:16:21.65:0,22,300	0/0:12,0:12:24.43:0,24,315	0/0:9,0:9:19.23:0,19,211	0/0:13,0:12:27.86:0,28,468	0/0:15,0:15:26.93:0,27,385	0/0:11,0:11:19.39:0,19,208	1/1:6,8:15:6.02:210,6,0	1/1:5,11:17:11.88:176,12,0	1/1:12,1:13:2.98:25,3,0	1/1:4,12:18:24:485,24,0	1/1:9,2:11:11.15:633,11,0	1/1:3,9:15:12.04:519,12,0	1/1:4,0:6:18.06:398,18,0
chr10	24269412	.	A	ATCATT	26769.64	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-9.523;DP=545;FS=3.293;HRun=0;HaplotypeScore=88.6631;InbreedingCoeff=0.9942;MQ=71.20;MQ0=0;MQRankSum=-12.157;QD=83.66;ReadPosRankSum=-0.585;VQSLOD=6.8392;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:33.11:0,33,735	1/1:1,10:11:30.10:969,30,0	0/0:12,0:12:35.28:0,35,609	0/0:9,0:9:20.90:0,21,293	1/1:2,31:37:99:3020,102,0	1/1:4,18:24:69.24:2185,69,0	1/1:6,21:28:72.25:2256,72,0	1/1:11,16:30:90.25:2496,90,0	0/0:24,0:24:69.24:0,69,1539	0/0:18,0:18:51.18:0,51,1137	0/0:18,0:18:51.16:0,51,1087	1/1:4,6:11:27.09:841,27,0	1/1:8,16:25:66.19:2020,66,0	1/1:2,10:13:36.12:1157,36,0	0/0:17,0:17:48.15:0,48,1027	0/0:19,0:19:57.18:0,57,1220	0/0:12,0:12:36.12:0,36,785	0/0:10,0:10:27.09:0,27,600	0/0:18,0:18:45.15:0,45,975	0/0:26,0:26:78.27:0,78,1740	0/0:31,0:31:81.28:0,81,1789	1/1:5,10:15:42.14:1315,42,0	1/1:3,18:23:59.73:1920,60,0	1/1:4,10:14:39.13:1200,39,0	1/1:4,25:34:87.30:2768,87,0	1/1:4,19:27:14.35:2249,14,0	1/1:4,18:22:63.17:1919,63,0	1/1:1,4:5:15.05:456,15,0
chr10	24272772	.	CT	C	5365.88	PASS	AB=0.882;AC=31;AF=0.554;AN=56;BaseQRankSum=-8.521;DP=450;FS=0.774;HRun=9;HaplotypeScore=57.9463;InbreedingCoeff=0.8853;MQ=78.10;MQ0=0;MQRankSum=-0.163;QD=21.13;ReadPosRankSum=0.845;VQSLOD=5.3805;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:48.14:0,48,552	1/1:1,7:8:21.01:192,21,0	0/0:13,1:14:2.88:0,3,245	0/0:9,0:8:12.04:0,12,139	1/1:1,18:19:51.02:466,51,0	1/1:1,17:18:48.03:439,48,0	1/1:2,11:13:33.01:302,33,0	1/1:4,27:31:80.99:727,81,0	0/1:13,2:15:12.82:13,0,362	0/0:25,0:25:66.20:0,66,759	0/0:22,0:22:66.19:0,66,755	1/1:2,12:14:36.01:330,36,0	1/1:4,20:24:50.87:467,51,0	1/1:0,12:12:30.02:275,30,0	0/0:21,0:22:63:0,63,697	0/0:18,0:18:48.14:0,48,554	0/0:8,0:8:24.07:0,24,277	0/0:16,0:16:39.07:0,39,435	0/0:12,0:12:30.09:0,30,346	0/0:20,0:20:54.16:0,54,623	0/0:10,0:11:23.90:0,24,256	1/1:1,7:8:18.01:165,18,0	1/1:5,11:16:33:302,33,0	1/1:1,12:13:36.02:330,36,0	1/1:4,11:15:33.01:302,33,0	1/1:1,24:25:40.41:619,40,0	1/1:1,19:20:42.02:384,42,0	1/1:0,3:3:6:55,6,0
chr10	24273025	.	A	AT	9933.78	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-7.722;DP=446;FS=11.901;HRun=3;HaplotypeScore=42.6567;InbreedingCoeff=0.9448;MQ=65.57;MQ0=0;MQRankSum=3.316;QD=36.66;ReadPosRankSum=1.351;VQSLOD=4.2850;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:27.08:0,27,322	1/1:0,7:7:21.03:272,21,0	0/0:2,0:2:6.02:0,6,69	0/0:4,0:4:8.19:0,8,55	1/1:1,29:31:84.23:1143,84,0	1/1:0,18:18:42.14:588,42,0	1/1:0,6:6:12.04:168,12,0	1/1:2,30:32:90.30:1260,90,0	0/0:11,0:11:33.10:0,33,396	0/0:17,0:17:48.14:0,48,568	0/0:23,0:23:60.18:0,60,720	1/1:0,14:14:42.14:588,42,0	1/1:0,25:25:72.24:1008,72,0	1/1:2,15:17:42.14:588,42,0	0/0:18,0:18:54.15:0,54,636	0/0:17,0:17:45.14:0,45,540	0/0:17,0:17:42.11:0,42,483	0/0:12,0:12:30.09:0,30,360	0/0:18,0:18:48.15:0,48,576	0/0:25,0:25:69.21:0,69,828	0/0:1,0:1:3.01:0,3,36	1/1:1,8:9:21.07:294,21,0	1/1:1,19:20:48.16:672,48,0	1/1:0,7:7:21.07:294,21,0	1/1:1,19:20:42.14:588,42,0	1/1:2,22:24:66.22:925,66,0	1/1:1,34:35:93.31:1302,93,0	1/1:0,5:6:18.06:242,18,0
chr10	24273306	.	A	AAT	15614.20	PASS	AB=0.524;AC=29;AF=0.518;AN=56;BaseQRankSum=-16.351;DP=515;FS=13.478;HRun=0;HaplotypeScore=52.3820;InbreedingCoeff=0.9215;MQ=82.61;MQ0=3;MQRankSum=-2.000;QD=54.03;ReadPosRankSum=2.200;VQSLOD=4.4881;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:51.15:0,51,798	1/1:0,10:10:27.09:549,27,0	0/0:20,0:19:54.18:0,54,844	0/0:9,0:9:27.08:0,27,365	1/1:0,19:19:54.18:1075,54,0	1/1:1,22:23:60.21:1219,60,0	1/1:0,9:11:12.04:244,12,0	1/1:0,34:35:99:2078,105,0	0/0:18,0:18:54.17:0,54,856	0/0:21,0:21:63.22:0,63,1025	0/0:22,0:22:66.21:0,66,1045	1/1:0,16:16:48.16:975,48,0	1/1:0,18:18:51.18:1036,51,0	1/1:0,19:18:54.19:1097,54,0	0/0:23,0:23:69.24:0,69,1110	0/0:23,0:22:69.24:0,69,1123	0/0:11,0:11:30.10:0,30,489	0/0:16,0:16:48.16:0,48,782	0/0:13,0:13:39.13:0,39,629	0/0:22,0:22:66.18:0,66,1047	0/0:11,0:11:33.11:0,33,538	1/1:0,14:14:39.13:768,39,0	1/1:0,26:26:72.25:1463,72,0	1/1:0,8:8:24.08:488,24,0	1/1:0,23:24:63.22:1280,63,0	0/1:2,20:20:37.70:967,0,38	1/1:0,39:39:99:2072,102,0	1/1:0,5:5:15.05:304,15,0
chr10	24273741	.	C	CTCTGCCTT	23141.42	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-2.937;DP=704;FS=7.126;HRun=0;HaplotypeScore=155.4655;InbreedingCoeff=0.8123;MQ=60.33;MQ0=3;MQRankSum=-8.493;QD=36.10;ReadPosRankSum=4.049;VQSLOD=4.2443;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:10,17:31:33.07:958,33,0	1/1:4,9:15:18.06:590,18,0	0/0:27,0:25:35.71:0,36,723	0/0:36,0:36:36.36:0,36,1243	1/1:11,26:38:42.11:1005,42,0	1/1:6,14:21:24.08:859,24,0	1/1:6,12:19:12.04:453,12,0	1/1:30,0:38:42.13:1073,42,0	1/1:5,12:18:24.08:857,24,0	1/1:3,21:25:63.22:2038,63,0	1/1:10,8:19:8.99:149,9,0	1/1:8,11:24:15.05:587,15,0	1/1:7,38:46:46.11:2124,46,0	1/1:3,11:14:24.08:894,24,0	1/1:10,30:43:45.15:1790,45,0	1/1:11,23:38:26.19:1097,26,0	1/1:12,9:23:31.35:1133,31,0	1/1:1,6:7:6.02:252,6,0	1/1:14,13:27:45.15:1632,45,0	1/1:12,8:21:18.02:474,18,0	1/1:8,8:17:18.02:517,18,0	1/1:12,17:30:35.56:806,36,0	1/1:5,5:11:9.03:302,9,0	1/1:11,17:30:9.03:251,9,0	1/1:9,11:21:9.03:225,9,0	1/1:6,15:24:57.18:1604,57,0	1/1:9,21:33:33.07:1175,33,0	1/1:3,0:6:15.05:297,15,0
chr10	24274276	.	CA	C	619.32	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.454;DP=640;FS=0.000;HRun=5;HaplotypeScore=60.5343;InbreedingCoeff=0.9670;MQ=71.51;MQ0=1;MQRankSum=-2.392;QD=26.93;ReadPosRankSum=1.961;VQSLOD=3.5378;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:96.28:0,96,1292	0/0:8,0:8:24.08:0,24,328	0/0:38,0:35:80.80:0,81,1095	0/0:29,0:29:78.25:0,78,1038	0/0:37,0:37:99:0,108,1457	0/0:26,0:26:78.23:0,78,1030	0/0:12,0:12:33.11:0,33,451	0/0:28,0:28:72.24:0,72,984	0/0:26,0:26:75.25:0,75,1015	0/0:38,0:38:99:0,111,1494	0/0:21,0:21:63.20:0,63,846	0/0:12,0:12:36.12:0,36,492	0/0:18,0:18:48.14:0,48,637	0/0:16,0:16:45.15:0,45,615	1/1:0,23:23:63.18:714,63,0	0/0:17,0:17:45.14:0,45,600	0/0:21,0:21:51.16:0,51,681	0/0:10,0:10:27.09:0,27,369	0/0:16,0:15:39.13:0,39,533	0/0:38,0:38:99:0,114,1560	0/0:17,0:17:51.17:0,51,698	0/0:17,0:17:51.17:0,51,697	0/0:27,0:27:75.25:0,75,1026	0/0:28,0:28:75.21:0,75,1004	0/0:22,0:22:66.20:0,66,882	0/0:20,0:20:57.18:0,57,765	0/0:36,0:36:99:0,102,1394	0/0:4,0:4:12.04:0,12,164
chr10	24274406	.	A	AACACACAC	7197.55	PASS	AB=0.765;AC=36;AF=0.643;AN=56;BaseQRankSum=-6.643;DP=593;FS=0.000;HRun=0;HaplotypeScore=183.5932;InbreedingCoeff=0.2712;MQ=63.54;MQ0=11;MQRankSum=-4.894;QD=16.14;ReadPosRankSum=-2.932;VQSLOD=3.7051;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:27:10.30:321,10,0	1/1:3,5:12:18.06:676,18,0	0/0:35,0:21:0.11:0,0,1	0/0:31,0:20:2.71:0,3,13	1/1:27,3:32:26.90:516,27,0	1/1:15,5:21:10.28:371,10,0	0/1:9,4:14:15.36:131,0,15	1/1:40,0:37:34.43:625,34,0	0/0:7,0:12:6.41:0,6,80	0/1:18,0:28:62.71:63,0,79	0/1:16,0:23:25.43:25,0,251	1/1:8,4:15:27.08:771,27,0	1/1:10,6:18:18.53:709,19,0	1/1:15,2:18:6.02:223,6,0	0/0:13,0:13:24.01:0,24,524	0/0:15,0:22:11.20:0,11,218	0/1:12,0:18:31.77:32,0,71	0/1:11,0:16:39.34:39,0,73	0/0:11,0:14:1.89:0,2,110	0/1:21,0:25:43.42:43,0,157	0/0:15,0:18:0.54:0,1,179	1/1:19,2:25:27.09:867,27,0	1/1:9,3:16:1.60:95,2,0	1/1:22,0:25:15.05:377,15,0	1/1:22,1:24:12.02:317,12,0	1/1:17,1:21:29.29:672,29,0	1/1:14,4:21:9.03:310,9,0	1/1:2,0:2:2.84:14,3,0
chr10	24274510	.	CA	C	14030.28	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-6.787;DP=579;FS=59.405;HRun=7;HaplotypeScore=72.2878;InbreedingCoeff=0.9802;MQ=81.84;MQ0=0;MQRankSum=-9.630;QD=26.03;ReadPosRankSum=5.504;VQSLOD=0.5469;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,18:20:42.08:426,42,0	1/1:0,4:4:12.03:122,12,0	0/0:28,0:28:75.18:0,75,891	0/0:12,0:12:24.04:0,24,266	1/1:1,30:31:81.10:803,81,0	1/1:1,26:27:69.02:704,69,0	1/1:2,11:13:21.04:214,21,0	1/1:3,31:32:87.11:860,87,0	1/1:3,18:21:54.12:551,54,0	1/1:3,24:27:72.16:735,72,0	1/1:1,21:22:60.14:611,60,0	1/1:0,14:14:39.09:398,39,0	1/1:0,29:29:81.08:825,81,0	1/1:2,27:29:69.15:704,69,0	1/1:2,14:16:42.09:429,42,0	1/1:1,19:20:54.12:551,54,0	1/1:1,20:21:25.31:574,25,0	1/1:1,18:19:41.83:410,42,0	1/1:2,18:20:54.12:551,54,0	1/1:0,24:24:68.37:680,68,0	1/1:3,15:18:45.10:459,45,0	1/1:1,16:17:45.10:459,45,0	1/1:0,15:15:39.09:398,39,0	1/1:2,20:22:60.13:611,60,0	1/1:0,23:23:51.11:520,51,0	1/1:2,19:21:57.13:581,57,0	1/1:0,19:19:51.11:520,51,0	1/1:1,12:13:33.07:337,33,0
chr10	24274601	.	A	ATG	13645.38	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-10.668;DP=679;FS=8.601;HRun=0;HaplotypeScore=87.2995;InbreedingCoeff=0.9961;MQ=61.71;MQ0=7;MQRankSum=-1.175;QD=33.69;ReadPosRankSum=1.457;VQSLOD=6.7222;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,13:26:48.15:745,48,0	1/1:3,2:6:18.02:241,18,0	0/0:38,0:19:29.75:0,30,322	0/0:32,0:21:40.32:0,40,379	1/1:11,21:31:34.73:1060,35,0	1/1:8,21:29:34.74:1098,35,0	1/1:6,15:21:30.57:496,31,0	1/1:14,24:39:54.47:1008,54,0	0/0:17,0:17:42.13:0,42,525	0/0:29,0:29:78.21:0,78,947	0/0:22,0:22:51.14:0,51,612	1/1:6,16:22:54.18:870,54,0	1/1:13,16:29:31.69:1017,32,0	1/1:5,18:22:51.17:841,51,0	1/1:0,2:20:48.03:448,48,0	0/0:26,0:26:65.77:0,66,842	0/0:25,0:25:35.19:0,35,652	0/0:12,0:16:29.42:0,29,281	0/0:25,0:25:51.05:0,51,592	0/0:24,0:26:72.03:0,72,849	0/0:17,0:17:42.13:0,42,524	1/1:3,14:17:45.14:718,45,0	1/1:8,16:23:57.19:931,57,0	1/1:13,20:32:37.74:1124,38,0	1/1:4,12:16:42.14:691,42,0	1/1:3,22:25:62.99:1058,63,0	1/1:14,18:31:33:1051,33,0	1/1:4,5:8:15.05:247,15,0
chr10	24274772	.	AT	A	9004.32	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=12.590;DP=592;FS=2.725;HRun=7;HaplotypeScore=58.8539;InbreedingCoeff=0.9992;MQ=76.80;MQ0=0;MQRankSum=-2.476;QD=26.02;ReadPosRankSum=2.636;VQSLOD=5.6762;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:42.10:0,42,501	1/1:1,9:10:21.04:212,21,0	0/0:19,0:19:42.13:0,42,522	0/0:12,0:12:26.98:0,27,298	1/1:2,30:32:84.18:853,84,0	1/1:3,24:27:69.15:704,69,0	1/1:0,10:10:30.07:305,30,0	1/1:5,31:36:93.17:933,93,0	0/0:22,0:22:66.21:0,66,830	0/0:27,0:27:75.23:0,75,933	0/0:25,0:25:72.23:0,72,905	1/1:1,17:18:51.11:520,51,0	1/1:0,31:31:84.19:857,84,0	1/1:2,21:23:51.11:520,51,0	0/0:15,0:15:42.13:0,42,528	0/0:17,0:17:51.13:0,51,625	0/0:24,0:24:63.18:0,63,777	0/0:14,0:14:39.12:0,39,490	0/0:17,0:17:45.14:0,45,555	0/0:23,0:23:54.17:0,54,668	0/0:14,0:13:42.13:0,42,528	1/1:2,27:29:75.17:765,75,0	1/1:0,22:22:63.14:642,63,0	1/1:3,12:15:33.07:337,33,0	1/1:0,18:18:48.11:490,48,0	1/1:5,25:30:40.44:728,40,0	1/1:4,23:27:63.14:643,63,0	1/1:0,17:18:50.15:496,50,0
chr10	24276402	.	A	AG	16490.90	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=1.371;DP=674;FS=0.285;HRun=1;HaplotypeScore=78.6310;InbreedingCoeff=0.9893;MQ=79.65;MQ0=0;MQRankSum=-2.687;QD=42.18;ReadPosRankSum=3.785;VQSLOD=5.0754;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,120,1530	1/1:0,6:6:18.06:269,18,0	0/0:24,0:24:69.21:0,69,859	0/0:18,0:18:42.04:0,42,507	1/1:0,32:32:81.27:1214,81,0	1/1:1,23:23:66.22:989,66,0	1/1:0,44:44:99:1843,123,0	1/1:1,30:32:87.29:1300,87,0	0/0:23,0:23:63.19:0,63,803	0/0:22,0:22:66.21:0,66,857	0/0:8,0:8:24.08:0,24,311	1/1:1,28:29:81.27:1214,81,0	1/1:0,30:30:90.30:1347,90,0	1/1:1,33:34:99:1484,99,0	1/1:0,30:30:90.30:1349,90,0	0/0:20,0:20:60.20:0,60,779	0/0:33,0:33:96.31:0,96,1244	0/0:18,0:18:54.18:0,54,701	0/0:24,0:24:72.23:0,72,934	0/0:22,0:22:66.20:0,66,843	0/0:31,0:31:93.29:0,93,1192	1/1:1,14:15:42.14:629,42,0	1/1:0,9:9:27.09:399,27,0	1/1:0,39:39:99:1709,114,0	1/1:0,20:20:54.18:807,54,0	1/1:1,18:19:18.22:770,18,0	1/1:0,25:25:69.06:1033,69,0	1/1:0,3:3:9.03:135,9,0
chr10	24276631	.	T	TTGA	4965.64	PASS	AB=1.000;AC=49;AF=0.907;AN=54;BaseQRankSum=-0.516;DP=429;FS=5.584;HRun=0;HaplotypeScore=96.0576;InbreedingCoeff=0.5151;MQ=78.34;MQ0=9;MQRankSum=-0.003;QD=13.68;ReadPosRankSum=3.468;VQSLOD=3.9606;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:20:32.67:236,33,0	1/1:6,0:6:14.85:141,15,0	0/0:33,0:25:14.73:0,15,107	0/0:23,0:17:3.34:0,3,42	1/1:15,0:14:14.97:122,15,0	1/1:19,0:19:38.93:413,39,0	1/1:14,0:14:23.72:170,24,0	0/1:21,0:20:6.88:100,0,7	1/1:5,4:9:3.01:60,3,0	1/1:10,0:10:23.77:199,24,0	1/1:5,0:5:8.99:75,9,0	1/1:14,0:14:27.87:297,28,0	1/1:13,0:13:27.39:224,27,0	1/1:19,0:19:33.03:431,33,0	1/1:12,0:12:11.73:70,12,0	1/1:10,0:10:23.89:221,24,0	./.	1/1:2,5:7:5.95:78,6,0	1/1:9,0:8:6:54,6,0	1/1:9,3:12:8.91:91,9,0	1/1:27,1:27:38.92:383,39,0	1/1:13,0:13:21.69:187,22,0	1/1:16,0:16:16.15:125,16,0	1/1:26,0:26:32.88:282,33,0	1/1:22,0:22:35.80:316,36,0	1/1:14,0:14:29.92:265,30,0	1/1:23,0:22:38.83:348,39,0	1/1:5,0:5:6:83,6,0
chr10	24276657	.	G	GAT	364.62	PASS	AB=0.943;AC=18;AF=0.333;AN=54;BaseQRankSum=3.969;DP=346;FS=7.368;HRun=0;HaplotypeScore=99.3584;InbreedingCoeff=-0.3520;MQ=52.74;MQ0=16;MQRankSum=1.746;QD=1.65;ReadPosRankSum=3.019;VQSLOD=0.8458;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:13:27.42:0,27,183	0/1:6,1:7:14.40:21,0,14	0/0:12,0:5:14.88:0,15,209	0/0:8,0:3:6.40:0,6,48	0/1:12,2:12:15.88:19,0,16	0/1:17,2:18:36.91:91,0,37	0/1:14,0:14:5.82:6,0,75	0/1:17,0:14:0.90:1,0,357	0/1:6,0:6:8.72:9,0,36	0/0:10,0:10:1.14:0,1,164	0/0:5,0:5:8.75:0,9,49	0/1:12,2:14:52.84:53,0,72	0/1:17,0:17:13.14:13,0,78	0/1:12,3:15:25.33:94,0,25	0/0:8,2:10:16.36:0,16,101	0/0:11,0:11:13.27:0,13,184	./.	0/1:8,0:8:25.54:26,0,49	0/0:11,0:8:17.47:0,17,183	0/1:5,0:4:1.09:1,0,33	0/0:26,0:25:15.42:0,15,246	0/1:9,1:10:17.37:17,0,36	0/0:8,2:10:3.44:0,3,28	0/1:21,0:21:7.81:8,0,91	0/1:17,3:19:16.10:45,0,16	0/1:13,0:13:33.25:33,0,80	0/1:16,1:16:25.87:43,0,26	1/1:3,1:3:3.01:30,3,0
chr10	24276783	.	AT	A	11598.72	PASS	AB=1.000;AC=53;AF=0.946;AN=56;BaseQRankSum=4.351;DP=402;FS=11.666;HRun=5;HaplotypeScore=88.7566;InbreedingCoeff=0.5606;MQ=83.29;MQ0=0;MQRankSum=-6.901;QD=30.21;ReadPosRankSum=3.508;VQSLOD=4.5934;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,14:15:42.12:476,42,0	1/1:0,3:3:9.03:102,9,0	0/0:17,0:18:7.33:0,7,399	0/1:9,0:9:12.57:13,0,210	1/1:1,21:22:60.17:681,60,0	1/1:2,21:23:57.16:646,57,0	1/1:0,9:10:29.11:312,29,0	1/1:2,13:15:39.11:442,39,0	1/1:0,11:11:33.09:374,33,0	1/1:1,12:13:39.11:442,39,0	1/1:0,18:17:51.15:578,51,0	1/1:0,14:14:36.10:408,36,0	1/1:1,17:18:51.14:578,51,0	1/1:0,13:13:39.11:442,39,0	1/1:3,13:16:42.10:467,42,0	1/1:0,19:19:57.16:646,57,0	1/1:1,9:10:27.08:306,27,0	1/1:1,7:8:18.05:204,18,0	1/1:3,11:14:36.09:399,36,0	1/1:0,18:18:48.14:544,48,0	1/1:0,8:8:21.06:238,21,0	1/1:1,14:15:39.11:442,39,0	1/1:0,14:14:36.10:408,36,0	1/1:0,14:14:42.12:476,42,0	1/1:0,23:23:69.20:783,69,0	1/1:1,18:19:54.15:613,54,0	1/1:1,15:16:36.10:408,36,0	1/1:0,6:6:15.04:170,15,0
chr10	24276821	.	CT	C	3459.28	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=13.071;DP=431;FS=13.581;HRun=2;HaplotypeScore=134.0474;InbreedingCoeff=0.9824;MQ=68.92;MQ0=0;MQRankSum=-13.886;QD=30.61;ReadPosRankSum=1.671;VQSLOD=1.9363;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:57.18:0,57,823	0/0:7,0:7:21.07:0,21,304	0/0:20,0:18:51.63:0,52,738	0/0:8,0:8:24.06:0,24,326	0/0:21,0:21:60.19:0,60,855	0/0:13,0:13:39.13:0,39,565	0/0:8,0:8:24.08:0,24,348	0/0:24,0:24:69.23:0,69,974	1/1:0,12:12:33.57:385,34,0	1/1:1,16:17:48.15:586,48,0	1/1:3,13:15:45.13:520,45,0	0/0:11,0:11:30.10:0,30,433	0/0:17,0:17:51.14:0,51,711	0/0:18,0:18:54.18:0,54,769	0/0:19,0:19:57.17:0,57,789	1/1:1,23:24:72.03:807,72,0	1/1:2,6:8:21.05:232,21,0	1/1:1,4:5:9.03:102,9,0	1/1:1,5:6:15.03:172,15,0	1/1:0,18:18:45.12:514,45,0	1/1:3,4:7:14.81:139,15,0	0/0:12,0:12:36.12:0,36,498	0/0:20,0:20:57.18:0,57,799	0/0:19,0:19:57.18:0,57,808	0/0:32,0:32:96.31:0,96,1366	0/0:20,0:20:60.20:0,60,852	0/0:22,0:22:63.13:0,63,859	0/0:7,0:7:18.06:0,18,262
chr10	24276825	.	TC	T	3596.85	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=12.938;DP=431;FS=13.411;HRun=1;HaplotypeScore=133.2407;InbreedingCoeff=0.9738;MQ=67.95;MQ0=0;MQRankSum=-14.169;QD=33.62;ReadPosRankSum=1.561;VQSLOD=1.9008;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:54.13:0,54,732	0/0:7,0:7:21.07:0,21,306	0/0:19,0:17:51.02:0,51,609	0/0:7,1:8:7.07:0,7,235	0/0:22,0:22:66.11:0,66,887	0/0:16,0:16:45.09:0,45,582	0/0:8,0:8:24.08:0,24,351	0/0:23,0:23:69.18:0,69,952	1/1:0,12:12:36.01:428,36,0	1/1:1,15:16:48.11:606,48,0	1/1:1,13:13:38.98:445,39,0	0/0:13,0:13:36.07:0,36,438	0/0:17,0:17:51.09:0,51,657	0/0:18,0:18:54.18:0,54,788	0/0:19,0:19:56.96:0,57,738	1/1:0,23:23:69.17:845,69,0	1/1:3,6:9:22.35:252,22,0	1/1:1,4:5:11.86:112,12,0	1/1:0,5:5:15.04:187,15,0	1/1:0,18:18:47.94:554,48,0	1/1:1,4:5:15:168,15,0	0/0:10,0:10:30.10:0,30,436	0/0:22,0:22:63.19:0,63,886	0/0:19,0:19:57.17:0,57,792	0/0:32,0:32:96.26:0,96,1325	0/0:22,0:22:66.17:0,66,903	0/0:23,0:23:69.22:0,69,985	0/0:7,0:7:18.04:0,18,242
chr10	24276846	.	AT	A	2776.40	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=6.216;DP=449;FS=11.799;HRun=6;HaplotypeScore=126.8801;InbreedingCoeff=0.9886;MQ=54.24;MQ0=0;MQRankSum=-9.917;QD=25.24;ReadPosRankSum=0.166;VQSLOD=1.9882;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,1:23:45.58:0,46,810	0/0:7,0:7:21.07:0,21,276	0/0:11,0:10:26.97:0,27,319	0/0:10,0:8:18.06:0,18,237	0/0:25,0:25:72.23:0,72,947	0/0:15,0:15:42.13:0,42,538	0/0:9,0:9:21.07:0,21,276	0/0:29,0:29:81.23:0,81,1006	1/1:1,12:13:36.09:385,36,0	1/1:3,11:14:33.08:354,33,0	1/1:3,10:12:30.07:319,30,0	0/0:12,0:12:30.08:0,30,367	0/0:16,0:16:48.16:0,48,630	0/0:18,0:18:48.16:0,48,631	0/0:24,0:24:53.13:0,53,859	1/1:1,23:24:66.16:704,66,0	1/1:1,8:9:26.98:263,27,0	1/1:0,4:4:12.03:129,12,0	1/1:1,9:9:24.06:257,24,0	1/1:2,14:16:39.10:417,39,0	1/1:1,6:7:15.04:161,15,0	0/0:15,0:15:45.15:0,45,592	0/0:25,0:25:66.21:0,66,867	0/0:18,0:18:54.18:0,54,710	0/0:30,0:30:90.22:0,90,1162	0/0:20,0:20:60.19:0,60,776	0/0:24,0:24:72.23:0,72,941	0/0:8,0:8:21.03:0,21,245
chr10	24276954	.	CA	C	2113.62	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=17.955;DP=575;FS=1.044;HRun=1;HaplotypeScore=138.4654;InbreedingCoeff=0.7918;MQ=63.72;MQ0=0;MQRankSum=0.266;QD=6.82;ReadPosRankSum=3.419;VQSLOD=0.8747;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,124,1730	0/1:5,0:5:0.57:1,0,38	0/0:14,0:11:26.78:0,27,312	0/0:17,1:13:11.99:0,12,303	1/1:16,0:16:35.29:142,35,0	1/1:23,0:23:9.42:165,9,0	1/1:18,0:18:34.60:129,35,0	1/1:29,0:29:8.22:136,8,0	0/0:23,0:23:63.19:0,63,905	0/0:17,0:17:51.15:0,51,713	0/0:11,0:11:33.08:0,33,451	1/1:26,1:27:63.25:289,63,0	1/1:25,0:25:13.03:212,13,0	0/1:21,0:21:8.65:103,0,9	1/1:19,0:19:26.14:182,26,0	0/0:24,0:24:72.24:0,72,1056	0/0:40,0:40:99:0,117,1695	0/0:25,0:25:69.23:0,69,1026	0/0:21,0:20:54.15:0,54,764	0/0:8,0:8:21.04:0,21,290	0/0:22,0:22:63.18:0,63,888	1/1:20,0:20:48.64:194,49,0	1/1:17,0:17:10.06:89,10,0	1/1:9,0:9:21.01:85,21,0	1/1:21,1:22:27.73:177,28,0	0/1:25,0:25:40.56:112,0,41	1/1:28,1:29:23.92:258,24,0	1/1:5,0:5:13.35:57,13,0
chr10	24276955	.	AC	A	8846.20	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=15.244;DP=574;FS=1.061;HRun=5;HaplotypeScore=117.1843;InbreedingCoeff=0.9709;MQ=64.65;MQ0=0;MQRankSum=0.404;QD=28.44;ReadPosRankSum=1.634;VQSLOD=4.0251;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,120,1574	1/1:2,2:4:3.01:34,3,0	0/0:13,0:12:20.11:0,20,317	0/0:19,0:14:20.16:0,20,274	1/1:0,16:16:47.96:510,48,0	1/1:2,21:23:60.17:680,60,0	1/1:0,18:18:45.10:498,45,0	1/1:1,28:29:81.22:909,81,0	0/0:23,0:23:63.19:0,63,831	0/0:16,0:16:42.13:0,42,560	0/0:11,0:11:27.09:0,27,369	1/1:1,26:27:72.21:815,72,0	1/1:2,22:24:63.18:714,63,0	1/1:2,19:21:39.11:442,39,0	1/1:3,17:20:54.15:605,54,0	0/0:24,0:24:72.18:0,72,961	0/0:39,0:39:99:0,117,1535	0/0:25,0:25:69.19:0,69,923	0/0:22,0:21:57.12:0,57,723	0/0:8,0:8:21.06:0,21,272	0/0:22,0:22:57.11:0,57,739	1/1:0,20:20:57.16:646,57,0	1/1:1,16:17:38.96:427,39,0	1/1:1,9:10:24.07:272,24,0	1/1:2,20:22:54.15:611,54,0	1/1:5,21:26:25.16:663,25,0	1/1:4,25:29:75.21:848,75,0	1/1:0,5:5:15.04:170,15,0
chr10	24277744	.	C	CT	12736.32	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=19.787;DP=793;FS=0.879;HRun=5;HaplotypeScore=121.5384;InbreedingCoeff=0.9954;MQ=78.11;MQ0=0;MQRankSum=-0.751;QD=28.05;ReadPosRankSum=2.395;VQSLOD=3.7369;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:57.12:0,57,602	1/1:0,9:9:27.09:341,27,0	0/0:29,0:29:36.32:0,36,575	0/0:22,0:22:50.05:0,50,532	1/1:2,25:27:55.09:804,55,0	1/1:2,27:28:66.21:834,66,0	1/1:4,19:23:54.04:660,54,0	1/1:9,24:33:76.09:916,76,0	0/0:25,0:25:69.17:0,69,741	0/0:44,0:44:99:0,117,1225	0/0:34,0:34:96.20:0,96,1013	1/1:5,20:25:45.14:569,45,0	1/1:5,33:39:91.89:1116,92,0	1/1:2,19:21:51.16:646,51,0	1/1:6,2:45:93.92:550,94,0	0/0:52,0:52:99:0,150,1604	0/0:22,0:22:66.17:0,66,708	0/0:11,0:11:27.07:0,27,290	0/0:18,0:18:48.12:0,48,515	0/0:31,0:31:87.22:0,87,935	0/0:30,0:30:81.20:0,81,869	1/1:3,25:28:72.17:891,72,0	1/1:2,34:36:96.25:1179,96,0	1/1:1,20:21:45.14:571,45,0	1/1:1,33:34:84.27:1064,84,0	1/1:3,26:29:68.42:972,68,0	1/1:3,39:43:99:1474,120,0	1/1:7,5:12:12.04:152,12,0
chr10	24277749	.	TG	T	6542.80	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=20.975;DP=783;FS=0.842;HRun=1;HaplotypeScore=139.6580;InbreedingCoeff=0.9985;MQ=79.96;MQ0=0;MQRankSum=-2.256;QD=14.90;ReadPosRankSum=2.760;VQSLOD=4.8609;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:60.18:0,60,852	1/1:9,0:9:25.94:143,26,0	0/0:30,0:30:84.13:0,84,1087	0/0:25,0:25:68.23:0,68,894	1/1:27,0:27:63.52:391,64,0	1/1:27,1:27:66.74:375,67,0	1/1:21,1:22:54.42:311,54,0	1/1:27,2:29:80.82:522,81,0	0/0:24,0:24:69.23:0,69,1017	0/0:44,0:44:99:0,131,1824	0/0:34,0:34:99:0,102,1414	1/1:21,0:21:44.31:255,44,0	1/1:36,1:37:96.42:578,96,0	1/1:20,0:20:52.59:309,53,0	1/1:44,1:45:99:677,109,0	0/0:51,0:51:99:0,153,2177	0/0:23,0:23:69.21:0,69,1001	0/0:11,0:11:30.08:0,30,411	0/0:18,0:18:51.17:0,51,762	0/0:34,0:34:99:0,99,1408	0/0:30,0:30:90.25:0,90,1269	1/1:28,0:28:76.06:466,76,0	1/1:37,1:38:97.25:549,97,0	1/1:20,0:20:45.58:243,46,0	1/1:35,0:35:87.80:521,88,0	1/1:30,1:31:80.06:524,80,0	1/1:41,1:42:98.61:566,99,0	1/1:7,0:7:17.58:113,18,0
chr10	24278935	.	C	CTA	34358.91	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-9.168;DP=666;FS=1.302;HRun=0;HaplotypeScore=68.4017;InbreedingCoeff=0.9953;MQ=77.97;MQ0=0;MQRankSum=-10.315;QD=54.80;ReadPosRankSum=5.114;VQSLOD=5.3235;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,17:18:54.19:1090,54,0	1/1:1,18:19:54.18:1073,54,0	0/0:20,0:20:56.55:0,57,866	0/0:19,0:19:56.39:0,56,843	1/1:2,27:30:81.28:1639,81,0	1/1:0,33:34:90.31:1806,90,0	1/1:1,22:23:60.21:1219,60,0	1/1:0,20:21:63.21:1219,63,0	1/1:0,21:21:57.20:1158,57,0	1/1:0,26:28:84.26:1633,84,0	1/1:1,24:25:72.20:1421,72,0	1/1:0,23:24:60.21:1219,60,0	1/1:0,36:36:99:2009,99,0	1/1:1,34:35:96.33:1951,96,0	1/1:0,30:31:78.27:1584,78,0	1/1:0,25:26:69.24:1402,69,0	1/1:0,9:9:21.07:427,21,0	1/1:0,7:7:21.07:426,21,0	1/1:2,14:17:48.16:957,48,0	1/1:2,19:21:60.16:1156,60,0	1/1:0,27:29:78.27:1585,78,0	1/1:3,28:31:81.28:1595,81,0	1/1:1,22:25:68.86:1362,69,0	1/1:1,26:27:75.26:1518,75,0	1/1:1,20:21:54.19:1097,54,0	1/1:0,24:27:78.24:1498,78,0	1/1:1,28:29:87.30:1766,87,0	1/1:0,9:12:27.09:549,27,0
chr10	24280071	.	C	CACTT	12359.19	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-12.637;DP=649;FS=0.331;HRun=0;HaplotypeScore=97.0716;InbreedingCoeff=0.9933;MQ=81.54;MQ0=0;MQRankSum=-3.545;QD=66.45;ReadPosRankSum=2.338;VQSLOD=7.2212;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:45.15:0,45,837	0/0:10,0:10:30.10:0,30,559	0/0:20,0:19:42.14:0,42,739	0/0:18,0:18:21.66:0,22,572	0/0:39,0:39:99:0,117,2173	0/0:31,0:31:93.32:0,93,1729	0/0:17,0:17:51.16:0,51,899	0/0:44,0:44:99:0,126,2281	1/1:5,15:21:33.73:1152,34,0	1/1:4,17:21:60.21:1558,60,0	1/1:2,16:19:51.17:1316,51,0	0/0:14,0:14:42.14:0,42,783	0/0:25,0:25:72.25:0,72,1331	0/0:19,0:19:54.18:0,54,1001	0/0:32,0:32:93.32:0,93,1732	1/1:3,29:33:81.24:2077,81,0	1/1:1,17:18:54.19:1439,54,0	1/1:2,7:10:18.63:481,19,0	1/1:4,15:19:51.17:1255,51,0	1/1:2,26:28:81.28:2058,81,0	1/1:3,13:16:39.13:1023,39,0	0/0:23,0:23:66.21:0,66,1190	0/0:31,0:31:90.31:0,90,1658	0/0:10,0:10:30.10:0,30,557	0/0:29,0:29:78.27:0,78,1456	0/0:37,0:37:43.46:0,43,1654	0/0:42,0:42:99:0,120,2138	0/0:6,0:6:12.04:0,12,224
chr10	24280612	.	GT	G	5352.38	PASS	AB=0.933;AC=21;AF=0.375;AN=56;BaseQRankSum=-12.661;DP=667;FS=7.212;HRun=10;HaplotypeScore=121.2179;InbreedingCoeff=0.9375;MQ=70.69;MQ0=0;MQRankSum=0.018;QD=20.91;ReadPosRankSum=3.518;VQSLOD=4.1881;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,20:25:62.91:542,63,0	0/0:15,0:15:36.10:0,36,398	0/1:13,1:14:1.99:2,0,208	0/0:16,0:16:30.06:0,30,320	0/0:37,0:37:99:0,108,1181	0/0:25,0:28:68.99:0,69,723	0/0:21,0:21:48.13:0,48,528	0/0:26,1:27:34.10:0,34,597	1/1:1,12:13:35.99:313,36,0	1/1:8,31:39:92.95:804,93,0	1/1:4,24:28:65.97:573,66,0	0/0:32,0:32:90.22:0,90,974	0/0:29,0:29:78.19:0,78,851	0/0:24,0:24:66.17:0,66,722	0/0:33,0:32:87.16:0,87,930	1/1:2,28:30:80.98:703,81,0	1/1:0,20:20:56.99:495,57,0	1/1:1,11:12:29.99:260,30,0	1/1:5,21:26:32.80:514,33,0	1/1:1,33:34:95.98:833,96,0	1/1:1,14:15:35.99:313,36,0	0/0:14,0:14:39.10:0,39,425	0/0:27,1:28:54.99:0,55,792	0/0:18,0:18:42.11:0,42,465	0/0:23,0:23:63.16:0,63,690	0/0:25,0:26:68.96:0,69,699	0/0:30,1:32:55.12:0,55,823	0/0:6,1:7:6.02:0,6,66
chr10	24281604	.	TA	T	8603.23	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=3.302;DP=563;FS=14.600;HRun=1;HaplotypeScore=62.1052;InbreedingCoeff=0.9929;MQ=83.72;MQ0=0;MQRankSum=-1.245;QD=39.65;ReadPosRankSum=3.246;VQSLOD=4.0517;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,37:37:99:1468,105,0	0/0:9,0:9:27.09:0,27,432	0/0:19,0:19:57.19:0,57,878	0/0:14,0:14:42.12:0,42,620	0/0:27,0:27:81.25:0,81,1241	0/0:19,0:19:57.19:0,57,911	0/0:15,0:15:45.15:0,45,716	0/0:34,0:34:99:0,99,1516	1/1:0,13:13:36.12:504,36,0	1/1:0,24:24:72.24:1007,72,0	1/1:0,20:20:60.16:817,60,0	0/0:18,0:18:54.18:0,54,863	0/0:28,0:28:84.29:0,84,1338	0/0:23,0:23:69.24:0,69,1101	0/0:24,0:24:72.25:0,72,1148	1/1:0,19:19:48.16:671,48,0	1/1:0,19:19:57.19:797,57,0	1/1:0,21:21:57.19:797,57,0	1/1:0,16:16:48.14:652,48,0	1/1:0,33:33:93.78:1302,94,0	1/1:0,15:15:42.14:587,42,0	0/0:15,0:15:45.15:0,45,715	0/0:16,0:16:48.16:0,48,767	0/0:5,0:5:15.05:0,15,240	0/0:27,0:27:81.24:0,81,1246	0/0:25,0:25:75.26:0,75,1197	0/0:24,0:24:72.25:0,72,1151	0/0:4,0:4:12.04:0,12,192
chr10	24281785	.	A	AT	9025.10	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=-13.715;DP=515;FS=3.009;HRun=6;HaplotypeScore=52.8529;InbreedingCoeff=0.9789;MQ=73.37;MQ0=0;MQRankSum=-0.418;QD=31.12;ReadPosRankSum=1.203;VQSLOD=5.4312;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:63.11:0,63,625	1/1:1,9:10:27.03:321,27,0	0/0:10,0:10:6.15:0,6,143	0/0:15,0:13:11.34:0,11,199	1/1:1,27:28:75.15:905,75,0	1/1:2,17:19:51.16:642,51,0	1/1:1,10:11:27.09:340,27,0	1/1:4,22:26:66.21:830,66,0	0/0:8,0:8:21.05:0,21,214	0/0:23,0:23:60.12:0,60,604	0/0:30,0:30:81.18:0,81,826	1/1:4,8:12:24.08:302,24,0	1/1:3,22:25:60.19:747,60,0	1/1:2,10:12:30.10:377,30,0	1/1:2,13:15:33.11:415,33,0	0/0:16,0:16:45.09:0,45,452	0/0:20,0:20:54.11:0,54,546	0/0:25,0:25:75.11:0,75,742	0/0:14,0:14:36.08:0,36,367	0/0:30,0:30:84.17:0,84,849	0/0:10,0:10:27.06:0,27,275	1/1:1,14:15:39.04:470,39,0	1/1:1,17:18:45.06:545,45,0	1/1:1,10:11:30.10:377,30,0	1/1:2,25:27:72.23:906,72,0	1/1:1,17:18:51.16:641,51,0	1/1:4,28:32:72.23:906,72,0	1/1:3,8:11:24.01:302,24,0
chr10	24282204	.	CACACACACACACACACACAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG	C	8948.11	PASS	AB=0.967;AC=27;AF=0.500;AN=54;BaseQRankSum=3.678;DP=511;FS=0.000;HRun=0;HaplotypeScore=365.9465;InbreedingCoeff=-0.1524;MQ=39.52;MQ0=39;MQRankSum=-3.061;QD=23.12;ReadPosRankSum=3.629;VQSLOD=2.3073;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:34:23.43:0,23,1060	0/1:11,0:11:45.42:731,0,45	./.	0/0:6,0:3:9.03:0,9,222	0/1:23,0:20:12.66:256,0,13	0/1:24,0:23:28.29:286,0,28	0/1:16,0:11:6.18:61,0,6	0/0:17,0:13:21.86:0,22,231	1/1:2,12:14:10.39:1187,10,0	1/1:13,0:13:23.56:574,24,0	1/1:13,0:12:14.69:323,15,0	0/1:19,0:16:99:215,0,129	0/1:22,0:22:11.93:873,0,12	0/1:23,0:21:29.98:457,0,30	0/1:25,0:23:99:221,0,506	1/1:5,23:26:15.05:1375,15,0	0/1:12,10:20:7.37:7,0,442	0/1:11,3:12:99:422,0,609	0/1:5,0:5:84.32:84,0,454	1/1:4,16:19:12.02:586,12,0	1/1:25,0:17:6:107,6,0	0/1:15,0:13:5.72:6,0,62	0/0:15,0:14:2.96:0,3,24	0/0:26,0:22:2.78:0,3,23	0/0:19,0:18:16.97:0,17,215	0/1:25,0:24:99:470,0,283	0/1:24,0:22:99:457,0,157	0/1:6,0:4:24.85:249,0,25
chr10	24282205	.	A	AG	380.67	PASS	AB=0.968;AC=9;AF=0.167;AN=54;BaseQRankSum=0.628;DP=497;FS=4.526;HRun=0;HaplotypeScore=138.5107;InbreedingCoeff=0.2208;MQ=39.36;MQ0=39;MQRankSum=-2.089;QD=3.34;ReadPosRankSum=0.392;VQSLOD=3.1571;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:33:24:0,24,280	0/0:11,0:11:14.94:0,15,148	./.	0/0:6,0:3:9.03:0,9,124	0/0:24,0:21:11.97:0,12,130	0/0:23,0:22:8.69:0,9,79	0/0:16,0:11:15.52:0,16,181	0/0:17,0:13:39.13:0,39,523	0/0:13,0:13:5.70:0,6,16	0/1:12,0:12:52.72:180,0,53	1/1:12,1:12:15.02:146,15,0	0/0:19,0:16:26.57:0,27,316	0/0:22,0:22:11.96:0,12,107	0/0:22,0:20:14.63:0,15,110	0/0:25,0:23:9.01:0,9,95	0/1:26,1:25:7.70:37,0,8	0/0:21,2:20:9.50:0,10,123	0/1:12,1:12:10.09:10,0,269	0/1:6,0:6:43.51:44,0,71	0/1:19,0:18:9.13:48,0,9	1/1:23,0:15:6:55,6,0	0/0:14,0:12:9:0,9,99	0/0:15,0:14:3.01:0,3,40	0/0:26,0:22:3.01:0,3,38	0/0:18,0:17:20.68:0,21,276	0/0:23,0:22:34.65:0,35,700	0/0:23,0:21:41.95:0,42,503	0/0:5,0:3:6:0,6,64
chr10	24282207	.	A	AG	687.62	PASS	AB=0.910;AC=13;AF=0.250;AN=52;BaseQRankSum=-0.625;DP=478;FS=4.176;HRun=0;HaplotypeScore=131.0306;InbreedingCoeff=0.2131;MQ=38.76;MQ0=38;MQRankSum=-1.778;QD=4.12;ReadPosRankSum=-0.662;VQSLOD=3.1658;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:32:21.05:0,21,252	0/0:11,0:11:14.95:0,15,141	./.	0/0:5,0:3:9.03:0,9,121	0/0:24,0:21:8.36:0,8,43	0/1:24,0:23:20.84:38,0,21	0/0:16,0:11:12.30:0,12,58	0/0:16,0:12:35.54:0,36,395	0/0:13,0:13:6.47:0,6,21	0/1:3,9:12:69.66:337,0,70	1/1:5,7:11:14.90:231,15,0	0/0:16,0:13:19.92:0,20,128	0/0:21,0:21:8.90:0,9,59	0/1:21,0:19:23.17:23,0,31	0/0:25,0:23:9.01:0,9,95	0/1:26,0:24:3.16:3,0,11	0/0:22,0:19:9.02:0,9,124	0/0:14,0:12:9.91:0,10,294	0/1:3,1:4:37.37:37,0,74	1/1:19,0:18:4.13:106,4,0	1/1:13,7:12:3.01:47,3,0	0/1:14,0:12:6.15:6,0,34	0/1:15,0:14:0:0,0,0	./.	0/0:17,1:17:20.09:0,20,172	0/0:19,1:19:7.01:0,7,458	0/0:22,0:20:13.24:0,13,247	0/0:5,0:3:6:0,6,61
chr10	24282208	.	CACACACACACACACAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG	C	11134.04	PASS	AB=1.000;AC=41;AF=0.788;AN=52;BaseQRankSum=1.951;DP=471;FS=0.000;HRun=0;HaplotypeScore=300.9542;InbreedingCoeff=0.3679;MQ=38.52;MQ0=38;MQRankSum=-1.053;QD=30.17;ReadPosRankSum=0.358;VQSLOD=3.0330;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:32:18.06:0,18,711	1/1:1,10:11:15.05:993,15,0	./.	0/0:4,0:2:3.01:0,3,62	1/1:6,17:20:9.03:457,9,0	1/1:7,16:22:6.49:355,6,0	1/1:16,0:11:14.58:413,15,0	1/1:16,0:12:11.28:233,11,0	1/1:13,0:13:10.39:1043,10,0	1/1:12,0:12:23.24:191,23,0	1/1:12,0:11:14.31:100,14,0	1/1:16,0:13:21.05:580,21,0	1/1:3,18:21:9.03:1100,9,0	1/1:4,16:18:9.03:592,9,0	0/1:25,0:23:99:221,0,380	1/1:26,0:24:13.60:1212,14,0	0/0:22,0:19:5.02:0,5,448	0/1:14,0:12:99:375,0,537	0/1:4,0:4:13.39:13,0,453	1/1:19,0:18:12.04:454,12,0	1/1:21,0:12:3.01:36,3,0	1/1:13,0:11:6:52,6,0	0/0:3,11:13:0.35:0,0,0	./.	1/1:18,0:17:12.49:225,12,0	1/1:19,0:18:25.41:966,25,0	1/1:22,0:20:42.08:1175,42,0	1/1:5,0:3:6.02:348,6,0
chr10	24282209	.	A	AG	1013.44	PASS	AB=0.969;AC=23;AF=0.442;AN=52;BaseQRankSum=0.282;DP=457;FS=0.688;HRun=0;HaplotypeScore=123.7658;InbreedingCoeff=0.1781;MQ=38.65;MQ0=38;MQRankSum=1.819;QD=3.84;ReadPosRankSum=-4.309;VQSLOD=2.1843;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:30:18.04:0,18,223	0/0:11,0:11:7.23:0,7,54	./.	0/0:3,0:1:3.01:0,3,41	0/1:22,1:20:13.20:55,0,13	0/1:21,2:22:26.67:35,0,27	1/1:16,0:11:14.74:133,15,0	0/1:15,0:11:46.77:47,0,259	0/0:13,0:13:6.47:0,6,21	0/1:12,0:12:69.34:69,0,92	1/1:11,0:10:13.82:67,14,0	1/1:16,0:13:8.94:123,9,0	0/0:19,0:19:6.11:0,6,17	0/1:19,1:18:35.23:37,0,35	0/0:25,0:23:9.01:0,9,95	0/0:25,0:23:6.73:0,7,20	0/0:21,0:18:9.02:0,9,122	0/0:13,0:11:24.84:0,25,293	0/1:4,0:4:3.85:4,0,74	1/1:19,0:18:3.61:62,4,0	1/1:21,0:12:2.80:13,3,0	1/1:10,2:10:2.59:47,3,0	0/1:13,1:13:0:0,0,0	./.	1/1:16,1:16:11.99:107,12,0	0/1:19,0:18:99:126,0,267	0/1:21,1:20:4.14:249,0,4	0/0:5,0:3:2.84:0,3,21
chr10	24282210	.	CACACACACACACAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG	C	9247.78	PASS	AB=1.000;AC=41;AF=0.788;AN=52;BaseQRankSum=3.827;DP=451;FS=0.000;HRun=0;HaplotypeScore=278.7418;InbreedingCoeff=0.4002;MQ=38.38;MQ0=38;MQRankSum=-1.661;QD=26.05;ReadPosRankSum=0.496;VQSLOD=3.2943;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:30:18.06:0,18,591	1/1:11,0:11:15.01:904,15,0	./.	0/0:3,0:1:3.01:0,3,54	1/1:23,0:20:9.03:361,9,0	1/1:23,0:22:6.49:311,6,0	1/1:16,0:11:14.74:246,15,0	1/1:15,0:11:8.83:105,9,0	1/1:13,0:13:9.97:1001,10,0	1/1:12,0:12:16.74:87,17,0	1/1:11,0:10:9.79:51,10,0	1/1:16,0:13:18.01:400,18,0	1/1:19,0:19:9.03:1000,9,0	1/1:20,0:18:8.95:539,9,0	0/1:25,0:23:99:221,0,313	1/1:25,0:23:12.04:1180,12,0	0/0:21,0:18:4.39:0,4,464	0/1:13,0:11:99:320,0,511	0/1:4,0:4:1.29:1,0,457	1/1:19,0:18:11.95:398,12,0	1/1:20,0:12:2.98:22,3,0	1/1:9,3:10:3.27:13,3,0	0/0:14,0:13:0.20:0,0,1	./.	1/1:14,0:13:9.97:101,10,0	1/1:18,0:17:22.99:727,23,0	1/1:21,0:19:39.01:886,39,0	1/1:3,2:3:5.99:374,6,0
chr10	24282211	.	A	AG	1328.23	PASS	AB=0.909;AC=18;AF=0.360;AN=50;BaseQRankSum=-0.036;DP=425;FS=2.667;HRun=0;HaplotypeScore=112.7090;InbreedingCoeff=0.2318;MQ=38.10;MQ0=39;MQRankSum=1.168;QD=6.54;ReadPosRankSum=-4.392;VQSLOD=2.8205;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:30:18.04:0,18,223	0/1:11,0:11:32.76:33,0,45	./.	0/0:3,0:1:3.01:0,3,41	0/1:23,0:20:14.91:81,0,15	0/1:23,0:22:3.06:3,0,30	1/1:12,5:11:14.80:229,15,0	0/1:8,6:10:99:106,0,259	0/0:13,0:13:6.47:0,6,21	0/0:4,0:4:2.98:0,3,115	./.	1/1:6,8:12:8.55:191,9,0	0/0:19,0:19:6.66:0,7,21	0/1:20,0:18:3.82:4,0,39	0/0:25,0:23:9.01:0,9,95	0/0:25,0:23:6.73:0,7,20	0/0:21,0:18:9.01:0,9,113	0/0:13,0:11:21.22:0,21,243	0/0:3,0:3:6.02:0,6,83	0/0:18,0:17:0.05:0,0,3	0/0:16,0:8:0:0,0,0	1/1:8,3:9:2.84:14,3,0	0/1:14,0:13:0:0,0,0	./.	1/1:9,2:11:9.03:139,9,0	0/1:11,6:16:99:237,0,268	1/1:10,11:19:9.60:422,10,0	0/1:4,1:3:0.53:16,0,1
chr10	24282222	.	CAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG	C	6566.66	PASS	AB=0.854;AC=31;AF=0.705;AN=44;BaseQRankSum=2.285;DP=342;FS=0.000;HRun=0;HaplotypeScore=139.8241;InbreedingCoeff=0.2035;MQ=39.93;MQ0=36;MQRankSum=0.195;QD=26.37;ReadPosRankSum=1.362;VQSLOD=3.5878;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:18:3.01:36,3,0	1/1:10,1:11:9.03:773,9,0	./.	./.	1/1:22,0:19:3.01:261,3,0	1/1:21,0:20:3.48:263,3,0	0/1:9,3:6:0:0,0,0	0/0:8,0:7:0:0,0,0	1/1:14,0:13:12.10:758,12,0	0/0:3,0:3:0:0,0,0	./.	1/1:1,4:4:3.01:260,3,0	1/1:18,0:19:9.03:749,9,0	1/1:19,0:17:6.02:522,6,0	1/1:9,11:18:3.01:233,3,0	1/1:25,0:23:12.04:1013,12,0	0/0:18,0:17:2.49:0,2,384	0/1:10,0:9:99:240,0,462	0/0:3,0:3:3.01:0,3,441	1/1:18,0:17:3.01:249,3,0	./.	./.	0/0:13,0:12:0.47:0,0,1	./.	1/1:5,4:8:0.47:1,0,0	0/1:9,2:10:99:517,0,308	1/1:2,7:7:6.02:442,6,0	1/1:3,0:2:3.01:250,3,0
chr10	24282531	.	T	TC	2404.94	PASS	AB=1.000;AC=30;AF=0.536;AN=56;BaseQRankSum=12.673;DP=506;FS=1.986;HRun=0;HaplotypeScore=104.3246;InbreedingCoeff=0.8765;MQ=76.39;MQ0=0;MQRankSum=2.051;QD=8.35;ReadPosRankSum=-0.052;VQSLOD=3.8017;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:39.10:0,39,525	1/1:8,0:8:11.87:50,12,0	0/1:12,0:12:6.18:6,0,352	0/0:12,0:12:36.09:0,36,482	1/1:26,0:26:46.55:216,47,0	1/1:23,0:23:29.07:184,29,0	1/1:12,2:14:29.22:197,29,0	1/1:28,2:29:66.34:416,66,0	0/0:25,0:24:60.19:0,60,822	0/0:15,0:15:45.15:0,45,629	0/0:13,0:13:39.13:0,39,544	1/1:18,0:18:22.79:124,23,0	1/1:10,1:11:9.99:94,10,0	1/1:19,0:19:19.64:111,20,0	0/0:14,0:14:39.05:0,39,236	0/0:26,0:26:75.22:0,75,1015	0/0:17,0:17:51.16:0,51,694	0/0:17,0:17:45.15:0,45,625	0/0:18,0:18:51.17:0,51,713	0/0:29,0:29:81.26:0,81,1113	0/0:17,0:17:45.13:0,45,610	0/1:12,0:12:1.64:45,0,2	1/1:11,0:11:28.92:115,29,0	1/1:11,1:12:18.87:93,19,0	1/1:20,0:20:43.66:194,44,0	1/1:30,0:30:71.80:368,72,0	1/1:34,2:36:71.92:382,72,0	1/1:6,0:6:7.98:31,8,0
chr10	24282594	.	TG	T	5992.65	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-0.829;DP=458;FS=0.000;HRun=1;HaplotypeScore=67.7151;InbreedingCoeff=0.9952;MQ=79.38;MQ0=1;MQRankSum=-2.185;QD=38.41;ReadPosRankSum=3.981;VQSLOD=5.3622;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,16:16:39.12:545,39,0	0/0:6,0:6:15.05:0,15,239	0/0:13,0:13:36.12:0,36,540	0/0:12,0:12:33:0,33,463	0/0:21,0:21:60.19:0,60,935	0/0:22,0:22:63.21:0,63,1007	0/0:23,0:23:69.24:0,69,1100	0/0:25,0:24:69.18:0,69,1032	1/1:0,17:17:45.15:629,45,0	1/1:0,19:19:57.19:797,57,0	1/1:0,13:13:33.11:461,33,0	0/0:16,0:15:45.15:0,45,720	0/0:18,0:18:54.18:0,54,857	0/0:16,0:16:45.15:0,45,717	0/0:13,0:13:39.13:0,39,623	1/1:0,22:22:66.22:923,66,0	1/1:0,15:15:42.14:587,42,0	1/1:0,8:8:21.07:293,21,0	1/1:0,10:10:27.09:378,27,0	1/1:0,23:23:63.21:876,63,0	1/1:0,13:13:36.12:503,36,0	0/0:12,0:12:36.12:0,36,546	0/0:15,0:15:42.13:0,42,642	0/0:9,0:9:24.08:0,24,383	0/0:18,0:18:51.15:0,51,790	0/0:30,0:30:90.31:0,90,1437	0/0:26,0:26:78.27:0,78,1247	0/0:7,0:7:18.06:0,18,288
chr10	24282650	.	CA	C	140.18	PASS	AB=0.892;AC=15;AF=0.268;AN=56;BaseQRankSum=-7.667;DP=537;FS=1.754;HRun=14;HaplotypeScore=134.5086;InbreedingCoeff=-0.2491;MQ=63.31;MQ0=6;MQRankSum=4.237;QD=0.56;ReadPosRankSum=2.450;VQSLOD=0.0609;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:16:28.85:0,29,155	0/1:5,2:9:5.21:5,0,46	0/0:40,0:14:12.42:0,12,123	0/1:28,0:12:7.22:7,0,56	0/0:30,3:33:3.40:0,3,198	0/1:15,3:18:9.46:9,0,85	0/1:11,3:15:34.75:57,0,35	0/1:22,4:25:46.09:52,0,46	0/0:14,0:18:10.09:0,10,93	0/0:19,0:27:57.15:0,57,291	0/0:13,0:15:2.35:0,2,66	0/1:18,2:19:4.99:5,0,110	0/0:19,1:19:3.26:0,3,108	0/1:22,1:23:6.07:6,0,130	0/0:11,0:11:23.14:0,23,150	0/0:20,0:23:16.46:0,16,140	0/0:11,0:12:12.98:0,13,63	0/1:8,0:8:1.72:2,0,41	0/1:12,0:12:0.66:1,0,64	0/0:12,0:20:25.74:0,26,186	0/0:7,0:8:3.64:0,4,69	0/0:9,1:10:1.39:0,1,61	0/1:18,5:23:26.47:26,0,144	1/1:8,1:9:0.70:39,1,0	0/0:26,5:31:8.93:0,9,197	0/1:15,3:18:25.56:26,0,81	0/1:28,3:31:34.35:34,0,134	0/1:7,1:7:3.86:4,0,45
chr10	24282661	.	A	AAAG	10973.82	PASS	AB=0.967;AC=40;AF=0.714;AN=56;BaseQRankSum=2.054;DP=543;FS=0.483;HRun=0;HaplotypeScore=110.1734;InbreedingCoeff=0.1411;MQ=55.65;MQ0=8;MQRankSum=-1.874;QD=23.25;ReadPosRankSum=5.791;VQSLOD=4.7371;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:15:18.47:0,18,113	1/1:4,4:9:23.07:379,23,0	0/0:43,0:11:8.85:0,9,127	0/1:35,0:11:3.41:3,0,94	1/1:20,18:38:99:1453,108,0	1/1:10,6:17:46.17:626,46,0	1/1:7,2:10:29.45:278,29,0	1/1:19,7:23:47.38:521,47,0	0/1:18,0:17:96.93:111,0,97	0/1:28,0:28:99:181,0,152	0/1:14,0:14:30.75:122,0,31	1/1:9,8:19:44.34:574,44,0	1/1:10,9:20:59.68:814,60,0	1/1:7,11:21:55.31:859,55,0	0/1:5,1:10:27.93:211,0,28	0/1:19,0:19:64.32:133,0,64	0/1:14,0:14:34.83:35,0,116	0/1:10,0:9:42.46:53,0,42	0/0:12,0:11:9.03:0,9,128	0/1:20,0:20:47.07:197,0,47	0/1:8,0:8:5.89:93,0,6	1/1:5,4:10:26.90:348,27,0	1/1:13,9:22:23.86:783,24,0	1/1:4,4:8:11.90:158,12,0	1/1:17,12:31:56.16:1071,56,0	1/1:13,5:18:53.85:636,54,0	1/1:18,9:30:51.81:960,52,0	1/1:9,2:13:35.97:376,36,0
chr10	24282693	.	GAA	G	8342.36	PASS	AB=0.667;AC=31;AF=0.554;AN=56;BaseQRankSum=6.573;DP=551;FS=14.619;HRun=9;HaplotypeScore=103.7084;InbreedingCoeff=0.9494;MQ=57.16;MQ0=8;MQRankSum=-4.625;QD=27.00;ReadPosRankSum=5.329;VQSLOD=3.2342;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:18:48.12:0,48,748	1/1:2,4:6:18.05:209,18,0	0/0:39,0:12:27.92:0,28,358	0/0:41,0:15:30.26:0,30,279	1/1:5,32:37:90.25:1047,90,0	1/1:1,15:16:42.12:487,42,0	1/1:2,10:12:24.06:280,24,0	1/1:7,34:39:99:1184,102,0	0/0:16,0:16:39.13:0,39,639	0/0:27,0:28:74.91:0,75,1146	0/0:13,0:13:33.11:0,33,541	1/1:3,14:17:33.06:374,33,0	1/1:3,19:21:31.40:539,31,0	1/1:2,16:18:45.13:523,45,0	1/1:2,8:10:18.05:210,18,0	0/0:19,0:19:54.17:0,54,856	0/0:17,0:17:47.59:0,48,730	0/0:8,0:8:21.07:0,21,338	0/0:10,0:10:30.10:0,30,484	0/0:25,0:25:72.18:0,72,1070	0/0:6,0:6:12.04:0,12,197	1/1:2,9:11:30.04:333,30,0	1/1:2,12:14:30.09:349,30,0	0/1:4,4:8:1.56:92,0,2	1/1:4,24:28:66.19:768,66,0	1/1:3,16:19:51.14:586,51,0	1/1:1,32:33:72.21:836,72,0	1/1:0,17:17:45.13:524,45,0
chr10	24282788	.	T	TA	6170.17	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-6.913;DP=574;FS=1.979;HRun=6;HaplotypeScore=68.2946;InbreedingCoeff=0.9930;MQ=79.29;MQ0=1;MQRankSum=-0.660;QD=33.17;ReadPosRankSum=2.220;VQSLOD=5.0873;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,14:17:42.13:528,42,0	0/0:9,0:9:21.05:0,21,214	0/0:19,0:20:24.88:0,25,405	0/0:11,0:10:24.04:0,24,236	0/0:36,0:36:99:0,102,1040	0/0:24,0:24:63.13:0,63,636	0/0:13,0:13:30.06:0,30,306	0/0:32,0:32:81.14:0,81,815	1/1:1,20:21:57.18:717,57,0	1/1:0,30:30:87.26:1080,87,0	1/1:2,11:13:33.11:415,33,0	0/0:25,0:25:63.14:0,63,643	0/0:25,0:25:66.13:0,66,667	0/0:26,0:26:69.15:0,69,704	0/0:15,0:15:39.07:0,39,391	1/1:3,20:23:60.19:755,60,0	1/1:5,13:18:48.13:577,48,0	1/1:1,5:6:12.04:151,12,0	1/1:2,18:20:54.16:664,54,0	1/1:1,27:28:78.25:981,78,0	1/1:0,10:10:24.08:302,24,0	0/0:11,0:11:33.07:0,33,337	0/0:27,0:27:75.14:0,75,752	0/0:9,0:9:21.05:0,21,214	0/0:22,0:22:60.14:0,60,612	0/0:35,1:36:58.47:0,58,911	0/0:34,0:34:84.19:0,84,857	0/0:13,0:13:27.05:0,27,275
chr10	24282887	.	C	CT	22225.63	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-1.260;DP=583;FS=3.248;HRun=1;HaplotypeScore=70.9865;InbreedingCoeff=0.9651;MQ=80.93;MQ0=0;MQRankSum=-9.616;QD=40.71;ReadPosRankSum=5.346;VQSLOD=5.1975;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,24:25:60.20:899,60,0	1/1:0,7:7:18.06:270,18,0	0/0:15,0:15:45.12:0,45,561	0/0:22,0:22:52.58:0,53,696	1/1:0,21:21:54.14:784,54,0	1/1:0,29:29:84.28:1259,84,0	1/1:0,20:20:51.17:765,51,0	1/1:2,20:22:60.20:898,60,0	1/1:0,31:31:90.30:1349,90,0	1/1:1,23:24:69.22:1015,69,0	1/1:0,20:20:51.13:739,51,0	1/1:0,23:23:66.22:989,66,0	1/1:2,27:29:69.23:1034,69,0	1/1:1,27:28:78.26:1168,78,0	1/1:0,27:27:78.26:1169,78,0	1/1:0,29:29:72.24:1079,72,0	1/1:3,9:12:33.11:493,33,0	1/1:0,12:12:27.09:405,27,0	1/1:2,14:16:42.13:607,42,0	1/1:1,22:23:66.22:989,66,0	1/1:0,28:28:84.28:1259,84,0	1/1:0,9:9:24.08:360,24,0	1/1:0,23:23:63.21:943,63,0	1/1:0,11:11:33.11:495,33,0	1/1:0,18:18:51.13:739,51,0	1/1:1,22:23:66.22:990,66,0	1/1:0,33:33:93.32:1394,93,0	1/1:0,3:3:9.03:135,9,0
chr10	24283158	.	A	AT	11672.50	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-12.198;DP=613;FS=0.323;HRun=6;HaplotypeScore=94.9137;InbreedingCoeff=0.9963;MQ=74.38;MQ0=0;MQRankSum=1.562;QD=32.16;ReadPosRankSum=1.260;VQSLOD=4.4939;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:48.11:0,48,496	1/1:1,12:13:36.12:453,36,0	0/0:16,0:16:27.05:0,27,270	0/0:9,0:8:20.91:0,21,192	1/1:2,24:26:63.12:757,63,0	1/1:3,27:30:75.24:944,75,0	1/1:0,16:16:42.13:528,42,0	1/1:5,30:35:87.75:1095,88,0	0/0:15,0:15:42.09:0,42,429	0/0:39,0:39:99:0,102,1036	0/0:24,0:24:60.13:0,60,612	1/1:3,14:17:33.11:415,33,0	1/1:2,23:25:66.21:830,66,0	1/1:2,26:29:78.24:972,78,0	0/0:19,0:19:51.11:0,51,520	0/0:22,0:22:60.13:0,60,612	0/0:14,0:14:27.02:0,27,266	0/0:8,0:8:15.03:0,15,153	0/0:17,0:17:51.11:0,51,515	0/0:30,0:30:69.14:0,69,704	0/0:19,0:19:57.13:0,57,587	1/1:5,22:27:63.16:775,63,0	1/1:0,22:22:66.21:830,66,0	1/1:0,12:12:36.12:453,36,0	1/1:1,29:30:78.25:981,78,0	1/1:2,30:32:87.28:1095,87,0	1/1:6,35:41:99:1281,102,0	1/1:0,8:8:21.07:264,21,0
chr10	24283230	.	GCC	G	5076.75	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=18.212;DP=643;FS=1.047;HRun=2;HaplotypeScore=132.7388;InbreedingCoeff=0.9812;MQ=89.15;MQ0=0;MQRankSum=-7.055;QD=24.29;ReadPosRankSum=4.045;VQSLOD=3.7523;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,10:13:14.41:270,14,0	0/0:9,0:9:27.09:0,27,548	0/0:20,0:20:60.21:0,60,1181	0/0:33,0:33:96.28:0,96,1815	0/0:32,0:32:75.14:0,75,1508	0/0:36,0:36:99:0,102,2062	0/0:24,0:24:66.23:0,66,1341	0/0:16,0:16:48.16:0,48,969	1/1:0,15:15:45.09:463,45,0	1/1:9,38:47:79.91:1131,80,0	1/1:3,24:27:60.08:594,60,0	0/0:20,0:20:54.19:0,54,1098	0/0:26,0:26:75.26:0,75,1513	0/0:25,0:25:75.24:0,75,1473	0/0:20,0:20:60.21:0,60,1206	1/1:4,23:27:70.03:732,70,0	1/1:0,13:13:33.04:340,33,0	1/1:1,10:11:24.04:250,24,0	1/1:3,9:12:30.70:316,31,0	1/1:4,19:23:48.55:484,49,0	1/1:6,15:21:48.12:496,48,0	0/0:30,0:30:78.27:0,78,1579	0/0:24,0:24:57.20:0,57,1156	0/0:17,0:17:51.18:0,51,1036	0/0:31,0:31:90.31:0,90,1818	0/0:26,0:26:78.27:0,78,1574	0/0:42,0:42:99:0,114,2271	0/0:3,0:3:6.02:0,6,122
chr10	24283233	.	AAT	A	5190.75	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=18.080;DP=641;FS=2.289;HRun=0;HaplotypeScore=129.6664;InbreedingCoeff=0.9839;MQ=89.30;MQ0=0;MQRankSum=-4.375;QD=25.57;ReadPosRankSum=4.211;VQSLOD=5.9914;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,10:12:29.99:290,30,0	0/0:10,0:10:30.06:0,30,567	0/0:21,0:21:63.18:0,63,1145	0/0:32,0:32:90.23:0,90,1598	0/0:30,0:30:84.13:0,84,1576	0/0:35,0:35:99:0,99,1999	0/0:22,0:22:66.21:0,66,1290	0/0:15,0:15:45.15:0,45,866	1/1:0,15:15:45.09:464,45,0	1/1:8,38:46:99:1171,111,0	1/1:3,24:27:60.08:595,60,0	0/0:21,0:21:60.20:0,60,1173	0/0:25,0:25:72.25:0,72,1460	0/0:25,0:25:75.26:0,75,1522	0/0:21,0:21:63.22:0,63,1280	1/1:3,23:26:70.04:733,70,0	1/1:0,13:13:33.04:340,33,0	1/1:1,10:11:24.04:250,24,0	1/1:2,9:11:30.71:316,31,0	1/1:4,19:23:54.07:533,54,0	1/1:4,15:19:49.34:498,49,0	0/0:31,0:31:93.23:0,93,1699	0/0:23,0:23:69.19:0,69,1286	0/0:17,0:17:51.18:0,51,1035	0/0:35,0:35:99:0,102,2057	0/0:28,0:28:84.29:0,84,1671	0/0:44,0:44:99:0,123,2473	0/0:3,0:3:6.02:0,6,122
chr10	24283489	.	A	AATATCTCAGAGTGTTG	94353.85	PASS	AB=1.000;AC=51;AF=0.911;AN=56;BaseQRankSum=-1.713;DP=644;FS=3.345;HRun=0;HaplotypeScore=238.1205;InbreedingCoeff=0.8245;MQ=68.64;MQ0=0;MQRankSum=-9.097;QD=155.19;ReadPosRankSum=3.953;VQSLOD=4.6926;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,4:10:24.08:1638,24,0	1/1:3,4:8:21.07:1548,21,0	0/0:24,0:24:66.19:0,66,2501	0/0:12,0:12:27.09:0,27,978	1/1:17,8:29:57.19:3554,57,0	1/1:13,11:29:66.22:4588,66,0	1/1:11,4:15:39.13:2822,39,0	1/1:45,4:49:99:8417,138,0	1/1:15,10:31:75.26:4741,75,0	1/1:12,6:20:63.18:4001,63,0	1/1:11,9:22:42.14:2533,42,0	1/1:11,10:25:57.19:3704,57,0	1/1:15,13:29:75.26:5167,75,0	1/1:20,7:28:75.25:4350,75,0	1/1:26,14:42:99:6875,111,0	1/1:8,14:25:60.21:4474,60,0	1/1:7,3:11:18.06:809,18,0	1/1:5,0:5:12.01:522,12,0	1/1:9,8:19:54.19:3261,54,0	1/1:20,12:38:78.26:4761,78,0	1/1:8,0:8:12.04:550,12,0	1/1:16,11:32:60.20:4094,60,0	1/1:9,11:22:51.17:3850,51,0	1/1:8,6:15:30.10:1698,30,0	1/1:13,10:24:63.22:4319,63,0	1/1:17,7:26:72.24:4815,72,0	1/1:20,14:36:96.33:6952,96,0	0/1:5,0:5:2.06:309,0,2
chr10	24283752	.	T	TA	11945.78	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-1.737;DP=399;FS=8.896;HRun=6;HaplotypeScore=82.4892;InbreedingCoeff=0.7614;MQ=50.50;MQ0=0;MQRankSum=-1.722;QD=30.63;ReadPosRankSum=1.426;VQSLOD=5.1141;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,9:9:27.09:339,27,0	1/1:1,8:9:24.01:282,24,0	0/0:4,0:4:5.97:0,6,48	0/0:5,0:4:5.77:0,6,60	1/1:6,25:31:74.98:880,75,0	1/1:2,12:14:36.12:452,36,0	1/1:1,7:8:21.07:264,21,0	1/1:8,24:32:81.26:1016,81,0	1/1:2,8:10:27.09:338,27,0	1/1:1,13:14:42.13:528,42,0	1/1:3,13:16:42.13:528,42,0	1/1:2,10:12:36.11:441,36,0	1/1:5,15:20:48.14:590,48,0	1/1:5,8:13:24.08:302,24,0	1/1:4,10:14:30.08:364,30,0	1/1:3,15:18:45.14:566,45,0	1/1:1,7:8:21.07:264,21,0	1/1:2,11:13:36.11:444,36,0	1/1:5,9:13:39.10:459,39,0	1/1:7,21:28:63.19:779,63,0	1/1:2,1:3:3.01:38,3,0	1/1:3,7:10:30.04:347,30,0	1/1:3,13:16:35.99:414,36,0	1/1:2,3:5:9.03:113,9,0	1/1:4,10:14:33.04:382,33,0	1/1:5,25:30:78.23:964,78,0	1/1:4,17:22:54.17:678,54,0	1/1:0,6:6:17.93:173,18,0
chr10	24283764	.	A	AT	11698.16	PASS	AB=1.000;AC=53;AF=0.946;AN=56;BaseQRankSum=-3.309;DP=389;FS=0.000;HRun=6;HaplotypeScore=79.1505;InbreedingCoeff=0.2645;MQ=51.07;MQ0=0;MQRankSum=-1.345;QD=30.31;ReadPosRankSum=2.545;VQSLOD=5.3494;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,7:9:21.05:251,21,0	1/1:0,7:7:21.07:264,21,0	0/0:3,0:3:0.89:0,1,2	0/1:7,0:6:20.66:21,0,38	1/1:7,21:28:66.20:817,66,0	1/1:1,12:13:39.12:490,39,0	1/1:1,8:9:21.07:264,21,0	1/1:8,27:35:81.25:1006,81,0	1/1:0,11:11:33.11:415,33,0	1/1:1,13:14:39.12:490,39,0	1/1:5,10:15:33.11:415,33,0	1/1:3,11:14:33.09:402,33,0	1/1:2,16:18:48.15:603,48,0	1/1:3,8:11:27.08:329,27,0	1/1:2,12:14:33.11:415,33,0	1/1:3,16:19:48.15:603,48,0	1/1:3,10:13:30.09:372,30,0	1/1:6,8:14:33.07:393,33,0	1/1:2,15:16:45.13:552,45,0	1/1:4,21:25:57.18:716,57,0	1/1:0,1:1:3.01:38,3,0	1/1:2,7:9:21.07:264,21,0	1/1:3,8:11:27.07:326,27,0	1/1:1,2:3:6.02:75,6,0	1/1:1,12:13:30.10:375,30,0	1/1:5,24:29:75.24:939,75,0	1/1:2,18:20:51.16:637,51,0	1/1:0,6:6:18.06:226,18,0
chr10	24287163	.	C	CAAA	3840.22	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=8.354;DP=516;FS=8.019;HRun=14;HaplotypeScore=98.1350;InbreedingCoeff=0.9099;MQ=44.59;MQ0=26;MQRankSum=-10.355;QD=16.14;ReadPosRankSum=-2.327;VQSLOD=1.7845;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:27:38.37:0,38,378	1/1:3,2:5:7.16:106,7,0	0/0:27,0:5:4.99:0,5,24	0/0:32,0:6:4.29:0,4,62	1/1:20,4:26:34.37:402,34,0	1/1:14,0:15:26.68:168,27,0	1/1:8,0:6:13.63:99,14,0	1/1:20,0:15:6.99:77,7,0	0/0:12,0:14:28.41:0,28,289	0/0:22,0:24:48.19:0,48,460	0/0:18,0:20:42.15:0,42,370	1/1:8,0:8:14.85:106,15,0	1/1:11,0:12:22.32:171,22,0	1/1:12,0:12:20.57:170,21,0	1/1:12,0:14:13.32:121,13,0	0/0:22,0:25:45.83:0,46,408	0/0:32,0:35:55.27:0,55,542	0/0:17,0:14:26.22:0,26,235	0/0:19,0:19:36.76:0,37,358	0/0:14,0:15:26.48:0,26,229	0/0:19,0:18:32.64:0,33,294	1/1:7,5:13:26.92:364,27,0	1/1:16,2:20:46:409,46,0	1/1:5,1:6:8.94:90,9,0	1/1:11,5:16:40.72:442,41,0	1/1:21,5:28:10.47:570,10,0	1/1:20,2:20:37.47:371,37,0	1/1:6,2:4:12.01:174,12,0
chr10	24287178	.	GAA	G	549.17	PASS	AB=0.963;AC=20;AF=0.357;AN=56;BaseQRankSum=5.831;DP=523;FS=1.215;HRun=14;HaplotypeScore=97.9703;InbreedingCoeff=0.3183;MQ=55.10;MQ0=13;MQRankSum=-0.692;QD=2.55;ReadPosRankSum=-3.191;VQSLOD=-0.6432;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:51.17:0,51,891	0/1:4,3:7:7.27:26,0,7	0/0:38,0:13:30.18:0,30,375	0/0:42,0:14:33.29:0,33,441	0/1:27,0:27:45.68:145,0,46	0/1:12,0:12:15.13:15,0,20	1/1:7,1:7:7.97:49,8,0	1/1:23,0:18:13.26:215,13,0	0/0:15,0:15:39.08:0,39,624	0/0:27,0:27:71.86:0,72,1119	0/0:24,0:24:65.60:0,66,970	0/0:6,0:6:5.39:0,5,23	0/0:13,0:13:11.90:0,12,53	0/1:10,0:10:6.08:6,0,24	0/1:15,0:15:25.03:25,0,37	0/0:19,0:19:51.12:0,51,825	0/0:30,0:30:66.15:0,66,1072	0/0:15,0:13:30.06:0,30,469	0/0:22,0:21:63.11:0,63,970	0/0:19,0:19:45.10:0,45,679	0/0:16,0:16:42.14:0,42,732	1/1:9,2:11:6.81:70,7,0	1/1:20,0:20:7.27:43,7,0	0/1:8,0:7:9.12:27,0,9	0/1:21,0:21:2.22:2,0,42	0/1:26,0:26:63.08:63,0,129	1/1:23,0:21:2.05:13,2,0	1/1:4,0:4:5.30:23,5,0
chr10	24287180	.	A	AAG	5528.56	PASS	AB=0.624;AC=27;AF=0.482;AN=56;BaseQRankSum=5.933;DP=534;FS=10.657;HRun=0;HaplotypeScore=92.9677;InbreedingCoeff=0.6632;MQ=56.81;MQ0=13;MQRankSum=-6.675;QD=23.53;ReadPosRankSum=1.809;VQSLOD=5.2741;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:51.17:0,51,779	1/1:4,3:7:11.93:225,12,0	0/0:39,0:13:27.31:0,27,359	0/0:43,0:15:33.05:0,33,383	0/1:10,15:27:32.41:600,0,32	0/1:7,4:11:5.43:124,0,5	1/1:4,1:6:13.74:158,14,0	1/1:10,11:19:19.92:417,20,0	0/0:15,0:15:39.08:0,39,550	0/0:27,0:27:72.07:0,72,1028	0/0:26,0:26:71.60:0,72,930	1/1:3,3:6:11.94:194,12,0	1/1:4,8:12:14.98:256,15,0	1/1:7,6:13:10.83:178,11,0	0/1:4,8:15:8.91:296,0,9	0/0:19,0:19:51.12:0,51,736	0/0:30,0:30:66.15:0,66,952	0/0:15,0:14:30.06:0,30,420	0/0:25,0:24:66.14:0,66,899	0/0:19,0:19:48.11:0,48,675	0/0:18,0:18:42.14:0,42,641	1/1:3,8:11:30.01:539,30,0	1/1:12,6:19:21.08:333,21,0	1/1:4,4:7:12.01:217,12,0	0/1:6,14:22:2.48:490,0,2	0/1:10,16:26:84.27:855,0,84	1/1:10,12:21:28.01:450,28,0	1/1:0,3:4:12.03:195,12,0
chr10	24287634	.	G	GT	12465.25	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=12.058;DP=553;FS=1.853;HRun=2;HaplotypeScore=91.8333;InbreedingCoeff=0.9950;MQ=73.67;MQ0=0;MQRankSum=-1.142;QD=38.47;ReadPosRankSum=1.505;VQSLOD=5.1871;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:93.28:0,93,1140	1/1:1,16:17:48.16:691,48,0	0/0:13,0:13:30.06:0,30,333	0/0:8,0:8:14.68:0,15,135	1/1:5,39:44:99:1555,108,0	1/1:0,17:17:51.17:734,51,0	1/1:0,10:10:27.09:389,27,0	1/1:3,23:26:69.21:959,69,0	0/0:16,0:16:48.15:0,48,595	0/0:30,0:30:87.27:0,87,1079	0/0:25,0:25:72.23:0,72,892	1/1:0,18:18:48.16:690,48,0	1/1:2,19:21:57.19:821,57,0	1/1:0,17:17:51.17:734,51,0	1/1:1,22:23:63.21:907,63,0	0/0:17,0:17:48.13:0,48,582	0/0:21,0:21:54.17:0,54,669	0/0:6,0:6:18.06:0,18,223	0/0:18,0:18:54.16:0,54,658	0/0:29,0:29:81.24:0,81,991	0/0:12,0:12:36.11:0,36,446	1/1:0,12:12:30.10:432,30,0	1/1:2,21:23:63.21:907,63,0	1/1:0,8:8:18.06:259,18,0	1/1:2,23:25:66.22:950,66,0	1/1:1,22:23:43.56:925,44,0	1/1:2,24:26:72.24:1036,72,0	1/1:2,12:14:33.11:475,33,0
chr10	24287937	.	CA	C	7243.17	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=6.440;DP=470;FS=4.628;HRun=8;HaplotypeScore=92.4755;InbreedingCoeff=0.9760;MQ=67.70;MQ0=0;MQRankSum=-6.788;QD=25.06;ReadPosRankSum=-0.190;VQSLOD=5.0968;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:51.16:0,51,616	1/1:1,8:9:24.04:232,24,0	0/0:13,0:13:30:0,30,333	0/0:15,0:11:17.68:0,18,159	1/1:6,34:40:99:1043,108,0	1/1:1,21:22:63.10:608,63,0	1/1:1,7:8:24.04:232,24,0	1/1:6,27:33:87.14:840,87,0	0/0:12,0:12:27.08:0,27,326	0/0:14,0:14:36.03:0,36,395	0/0:27,0:27:72.20:0,72,850	1/1:4,11:14:39.03:364,39,0	1/1:6,19:25:54.08:521,54,0	1/1:1,7:8:21.03:203,21,0	1/1:4,19:23:63.08:602,63,0	0/0:16,0:16:42.13:0,42,507	0/0:15,0:15:39.12:0,39,471	0/0:13,0:13:36.11:0,36,434	0/0:14,0:14:30.06:0,30,347	0/0:20,0:20:60.18:0,60,725	0/0:4,0:4:6.02:0,6,72	1/1:1,9:10:27.04:261,27,0	1/1:3,18:21:54.08:521,54,0	1/1:1,6:7:15.02:145,15,0	1/1:1,13:14:39.06:377,39,0	1/1:6,20:26:66.10:637,66,0	1/1:5,17:22:57.07:543,57,0	1/1:0,6:6:12.02:116,12,0
chr10	24287974	.	T	TA	2749.96	PASS	AB=1.000;AC=47;AF=0.839;AN=56;BaseQRankSum=2.133;DP=478;FS=13.544;HRun=11;HaplotypeScore=164.1214;InbreedingCoeff=0.4619;MQ=61.18;MQ0=5;MQRankSum=-2.432;QD=6.44;ReadPosRankSum=-0.703;VQSLOD=0.2428;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,12:15:33.07:335,33,0	1/1:10,0:10:16.46:67,16,0	0/0:30,0:13:11.16:0,11,68	0/0:21,0:11:2.38:0,2,30	1/1:39,0:39:62.11:257,62,0	1/1:25,0:25:51.52:219,52,0	1/1:11,0:11:25.29:104,25,0	1/1:29,0:29:55.50:226,56,0	1/1:6,0:6:1.83:4,2,0	1/1:15,0:15:9.36:41,9,0	0/1:26,0:26:3.90:11,0,4	1/1:15,0:14:29.61:129,30,0	1/1:19,0:19:37.89:158,38,0	1/1:10,0:10:24.17:102,24,0	1/1:18,0:18:34.82:147,35,0	0/1:9,0:9:0:0,0,14	0/1:14,0:14:1.06:3,0,1	0/1:9,0:9:1.18:1,0,6	1/1:20,0:19:2.23:47,2,0	0/1:30,0:30:14.01:14,0,35	1/1:3,0:3:0.47:1,0,0	1/1:11,0:11:24.98:103,25,0	1/1:12,0:12:27.25:124,27,0	1/1:7,0:7:16.07:67,16,0	1/1:16,0:16:37.58:162,38,0	1/1:28,0:28:67.18:285,67,0	1/1:25,0:25:53.66:229,54,0	1/1:5,0:5:8.13:44,8,0
chr10	24287977	.	A	AAT	11762.54	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=7.921;DP=474;FS=9.836;HRun=0;HaplotypeScore=143.9148;InbreedingCoeff=0.9113;MQ=61.03;MQ0=5;MQRankSum=-11.744;QD=42.31;ReadPosRankSum=-0.045;VQSLOD=5.5944;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:32.43:0,32,144	1/1:4,6:10:30.01:408,30,0	0/0:29,0:12:17.57:0,18,173	0/0:20,0:10:3.64:0,4,109	1/1:13,27:40:99:1423,105,0	1/1:6,18:24:72.08:1088,72,0	1/1:1,10:11:33.10:514,33,0	1/1:11,20:31:63.48:1169,63,0	0/0:6,0:6:4:0,4,99	0/0:16,0:16:35.98:0,36,354	0/0:26,0:26:63.03:0,63,653	1/1:4,11:14:42.10:612,42,0	1/1:5,14:19:54.14:816,54,0	1/1:1,9:10:30.08:476,30,0	1/1:2,13:15:45.07:699,45,0	0/0:10,0:10:28.97:0,29,264	0/0:14,0:14:30.06:0,30,317	0/0:9,0:9:23.98:0,24,220	0/0:20,0:19:49.01:0,49,429	0/0:28,0:28:64.27:0,64,631	0/0:5,0:5:3.01:0,3,31	1/1:2,9:11:30.09:485,30,0	1/1:4,8:12:30.09:477,30,0	1/1:1,5:6:18.06:299,18,0	1/1:1,14:15:45.14:714,45,0	1/1:4,24:28:84.27:1337,84,0	1/1:10,16:26:75.16:1099,75,0	1/1:4,1:5:4.93:146,5,0
chr10	24287985	.	AC	A	3833.64	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-14.923;DP=468;FS=0.838;HRun=1;HaplotypeScore=160.5438;InbreedingCoeff=0.9260;MQ=58.11;MQ0=5;MQRankSum=11.806;QD=28.61;ReadPosRankSum=-3.031;VQSLOD=2.6443;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:35.18:0,35,222	0/0:8,0:8:23.68:0,24,168	0/0:21,1:8:9.52:0,10,91	0/0:15,0:8:4.67:0,5,85	0/0:36,0:36:85.33:0,85,624	0/0:23,0:23:66.28:0,66,483	0/0:12,0:12:13.62:0,14,212	0/0:33,0:33:93.56:0,94,764	1/1:0,4:4:9.03:125,9,0	1/1:0,17:17:51.07:593,51,0	1/1:11,16:27:73.08:874,73,0	0/0:19,0:18:53.83:0,54,423	0/0:18,0:18:53.78:0,54,415	0/0:10,0:10:27.64:0,28,195	0/0:15,0:15:41.80:0,42,315	1/1:7,2:9:19.64:251,20,0	1/1:2,14:16:30.03:371,30,0	1/1:0,7:7:18.01:226,18,0	1/1:2,20:22:47.15:651,47,0	1/1:3,24:27:67.32:701,67,0	1/1:0,5:5:3.01:42,3,0	0/0:12,0:13:36.42:0,36,251	0/0:14,0:14:25.25:0,25,266	0/0:7,0:7:20.72:0,21,144	0/0:17,0:17:30.73:0,31,327	0/0:29,0:29:86.63:0,87,681	0/0:24,0:24:69.58:0,70,515	0/0:6,0:6:17.98:0,18,150
chr10	24288015	.	C	CA	12590.85	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=12.825;DP=514;FS=0.763;HRun=2;HaplotypeScore=130.6268;InbreedingCoeff=0.9924;MQ=69.63;MQ0=0;MQRankSum=-10.974;QD=36.50;ReadPosRankSum=2.617;VQSLOD=4.3484;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:27.08:0,27,334	1/1:0,12:12:36.12:506,36,0	0/0:12,0:12:36.07:0,36,419	0/0:9,0:9:20.66:0,21,252	1/1:0,40:40:99:1577,114,0	1/1:3,23:26:69.23:974,69,0	1/1:2,11:13:33.11:450,33,0	1/1:4,31:35:93.31:1311,93,0	0/0:8,0:8:21.06:0,21,250	0/0:24,0:24:69.22:0,69,856	0/0:20,0:20:60.19:0,60,743	1/1:3,16:18:45.15:629,45,0	1/1:4,25:29:75.25:1057,75,0	1/1:0,15:15:45.15:636,45,0	1/1:2,21:23:66.22:920,66,0	0/0:14,0:14:42.13:0,42,521	0/0:15,0:15:33.07:0,33,379	0/0:6,0:6:15.03:0,15,171	0/0:22,0:21:60.16:0,60,708	0/0:23,0:23:69.10:0,69,821	0/0:7,0:7:18.06:0,18,223	1/1:6,17:23:51.12:672,51,0	1/1:2,17:19:51.17:703,51,0	1/1:0,11:11:21.52:296,22,0	1/1:2,18:20:51.17:719,51,0	1/1:5,22:27:29.02:850,29,0	1/1:1,26:27:78.21:1079,78,0	1/1:1,5:6:15.05:212,15,0
chr10	24288707	.	TGAGAGACAGAGAGAGAGAGA	T	7845.78	PASS	AB=0.580;AC=19;AF=0.396;AN=48;BaseQRankSum=9.760;DP=448;FS=35.293;HRun=0;HaplotypeScore=167.5675;InbreedingCoeff=0.6317;MQ=47.81;MQ0=17;MQRankSum=-9.671;QD=42.64;ReadPosRankSum=3.069;VQSLOD=2.3124;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:17:12.02:0,12,581	1/1:1,4:4:9.03:388,9,0	0/0:19,0:4:11.87:0,12,92	0/0:40,0:10:13.43:0,13,94	0/1:8,17:20:99:696,0,366	1/1:8,13:15:15.05:830,15,0	./.	./.	0/0:13,0:11:9.03:0,9,790	0/0:21,0:21:54.06:0,54,2426	0/0:25,0:23:51.06:0,51,2325	./.	1/1:5,16:15:21.07:1052,21,0	1/1:1,7:7:9.03:498,9,0	0/0:4,0:11:3.01:0,3,249	0/0:16,0:15:8.04:0,8,1555	0/0:20,0:20:36.03:0,36,1636	0/0:18,0:16:39.44:0,39,1704	0/0:13,0:11:27.07:0,27,1470	0/0:21,0:21:53.94:0,54,2579	0/0:18,0:18:30.02:0,30,1313	1/1:3,14:13:18.06:773,18,0	1/1:3,18:19:18.06:768,18,0	./.	1/1:3,15:13:21.07:1051,21,0	0/1:5,8:12:99:271,0,353	0/1:3,24:21:73.99:1186,0,74	1/1:1,6:5:6.02:332,6,0
chr10	24288710	.	GAGAC	G	1497.51	PASS	AB=0.946;AC=24;AF=0.500;AN=48;BaseQRankSum=8.298;DP=451;FS=9.423;HRun=0;HaplotypeScore=108.0553;InbreedingCoeff=0.5355;MQ=47.95;MQ0=21;MQRankSum=-9.174;QD=6.51;ReadPosRankSum=5.228;VQSLOD=1.3059;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:13,5:16:44.81:45,0,53	1/1:4,0:4:6.02:67,6,0	0/0:19,0:4:11.87:0,12,92	0/0:41,0:10:4:0,4,59	1/1:26,0:20:14.86:159,15,0	1/1:19,0:15:15.04:169,15,0	./.	./.	0/0:15,0:12:9.03:0,9,221	0/0:23,0:23:61.53:0,62,714	0/0:25,0:23:50.90:0,51,612	./.	1/1:19,0:15:18.05:202,18,0	1/1:8,0:7:9.03:101,9,0	0/0:14,0:11:3.01:0,3,49	0/0:17,0:16:8.78:0,9,323	0/0:22,0:21:35.92:0,36,401	0/0:18,0:16:38.94:0,39,508	0/1:14,0:12:23.05:23,0,262	0/0:21,0:21:19.92:0,20,613	0/1:19,0:18:11.79:12,0,278	1/1:17,0:13:12.03:135,12,0	1/1:20,0:19:12.03:128,12,0	./.	1/1:17,0:13:18.05:202,18,0	0/1:13,0:12:26.07:121,0,26	1/1:29,0:21:24.01:249,24,0	1/1:7,0:5:6.02:68,6,0
chr10	24288714	.	C	CAG	960.18	PASS	AB=0.847;AC=15;AF=0.326;AN=46;BaseQRankSum=-6.580;DP=441;FS=3.369;HRun=0;HaplotypeScore=103.8099;InbreedingCoeff=0.2532;MQ=48.53;MQ0=26;MQRankSum=5.148;QD=4.23;ReadPosRankSum=-2.930;VQSLOD=2.1057;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:16:2.74:0,3,12	0/0:4,0:4:5.68:0,6,28	./.	0/1:41,0:10:0:0,0,0	0/0:24,0:20:12.92:0,13,60	0/0:18,0:15:14.20:0,14,70	./.	./.	0/1:11,5:15:35.75:36,0,57	0/1:14,9:23:13.29:162,0,13	0/1:15,8:22:20.80:122,0,21	./.	0/0:16,0:15:17.04:0,17,84	0/0:8,0:7:8.52:0,9,42	0/1:15,0:12:4.10:4,0,13	0/1:11,4:14:20.78:122,0,21	1/1:12,0:18:11.48:122,11,0	1/1:15,3:16:8.09:136,8,0	1/1:12,0:10:11.49:101,11,0	0/1:22,1:23:47.16:143,0,47	1/1:14,5:19:12.03:161,12,0	0/0:16,0:13:11.36:0,11,56	0/0:19,0:19:8.99:0,9,43	./.	0/0:17,0:13:17.04:0,17,84	0/0:13,0:12:2.84:0,3,14	0/0:27,0:21:19.08:0,19,90	0/0:6,0:4:5.68:0,6,28
chr10	24289431	.	GT	G	5580.57	PASS	AB=0.886;AC=19;AF=0.339;AN=56;BaseQRankSum=12.542;DP=538;FS=9.059;HRun=4;HaplotypeScore=51.2606;InbreedingCoeff=0.9175;MQ=85.51;MQ0=0;MQRankSum=-0.849;QD=28.04;ReadPosRankSum=3.116;VQSLOD=3.9678;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:36.12:0,36,504	0/0:7,0:7:21.07:0,21,294	0/0:14,0:14:35.13:0,35,428	0/0:23,0:23:63.21:0,63,867	0/0:24,0:24:69.22:0,69,949	0/0:25,0:25:72.24:0,72,1008	0/0:13,0:13:39.10:0,39,510	0/0:31,0:31:87.28:0,87,1204	1/1:0,22:22:57.17:684,57,0	1/1:0,24:24:72.22:864,72,0	1/1:1,24:25:63.19:756,63,0	0/0:16,0:16:42.13:0,42,573	0/0:20,0:20:60.20:0,60,840	0/0:26,0:26:78.25:0,78,1075	0/0:31,0:31:90.27:0,90,1213	1/1:1,18:19:54.17:648,54,0	1/1:1,9:10:27.08:324,27,0	1/1:0,8:8:21.06:252,21,0	1/1:2,12:14:36.11:432,36,0	1/1:1,31:32:93.28:1114,93,0	1/1:0,14:14:39.12:468,39,0	0/0:16,0:16:45.14:0,45,614	0/0:19,0:19:54.18:0,54,756	0/0:18,0:18:51.16:0,51,698	0/0:10,0:10:27.09:0,27,378	0/1:27,4:31:38.59:39,0,998	0/0:27,0:27:78.26:0,78,1092	0/0:7,0:7:18.06:0,18,252
chr10	24291407	.	CA	C	4715.49	PASS	AB=0.773;AC=29;AF=0.558;AN=52;BaseQRankSum=6.389;DP=676;FS=25.557;HRun=4;HaplotypeScore=58.7241;InbreedingCoeff=0.8947;MQ=24.81;MQ0=303;MQRankSum=-3.372;QD=13.63;ReadPosRankSum=2.142;VQSLOD=2.6193;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:20:45.14:0,45,613	1/1:10,7:8:18.06:216,18,0	./.	./.	1/1:11,14:14:12.04:144,12,0	1/1:11,15:14:24.07:288,24,0	1/1:10,7:7:12.04:144,12,0	1/1:13,17:18:51.11:595,51,0	0/0:18,0:9:21.07:0,21,294	0/0:24,0:16:48.16:0,48,671	0/0:31,0:18:36.08:0,36,481	1/1:1,16:16:36.11:431,36,0	1/1:6,15:14:36.11:431,36,0	1/1:8,15:15:36.11:431,36,0	0/0:29,0:15:36.12:0,36,503	0/0:26,0:14:36.05:0,36,461	0/0:42,0:15:30.10:0,30,420	0/0:28,0:8:11.91:0,12,121	0/0:19,0:8:21.07:0,21,286	0/0:43,0:25:66.13:0,66,879	0/0:24,0:8:18.06:0,18,252	1/1:13,18:17:39.12:467,39,0	1/1:13,10:11:21.06:251,21,0	1/1:23,4:4:9.03:108,9,0	1/1:9,15:16:32.99:395,33,0	1/1:11,12:12:33.10:396,33,0	1/1:10,15:14:30.09:359,30,0	0/1:12,5:5:59.89:60,0,70
chr10	24293497	.	AG	A	2023.33	PASS	AB=0.556;AC=29;AF=0.580;AN=50;BaseQRankSum=6.391;DP=377;FS=0.615;HRun=1;HaplotypeScore=21.6199;InbreedingCoeff=0.7851;MQ=38.16;MQ0=83;MQRankSum=-5.530;QD=17.29;ReadPosRankSum=3.584;VQSLOD=3.8827;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	1/1:0,4:3:9.03:126,9,0	./.	0/0:44,0:4:12.04:0,12,176	1/1:1,10:9:9.03:126,9,0	1/1:1,9:9:12.04:168,12,0	1/1:1,3:3:6.02:84,6,0	1/1:17,3:1:2.99:24,3,0	0/0:14,0:14:24.08:0,24,383	0/0:14,0:10:30.07:0,30,453	0/0:12,0:10:21.07:0,21,335	1/1:0,5:5:9.03:126,9,0	1/1:0,6:5:12.04:167,12,0	1/1:0,9:8:18.06:251,18,0	1/1:0,6:4:9.03:126,9,0	0/0:15,0:15:24.08:0,24,383	0/0:39,0:39:75.26:0,75,1188	0/0:11,0:11:18.06:0,18,287	0/0:19,0:11:33.11:0,33,527	0/0:16,0:14:33.11:0,33,523	0/0:31,0:27:54.18:0,54,863	1/1:0,5:3:9.03:126,9,0	1/1:0,9:5:9.03:126,9,0	1/1:0,5:4:9.03:126,9,0	1/1:0,4:3:9.03:126,9,0	0/1:2,8:8:23.89:269,0,24	1/1:0,9:8:18.06:251,18,0	./.
chr10	24293857	.	TAA	T	5819.99	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=13.990;DP=395;FS=52.583;HRun=10;HaplotypeScore=99.6481;InbreedingCoeff=0.9782;MQ=60.27;MQ0=5;MQRankSum=-1.223;QD=28.39;ReadPosRankSum=1.225;VQSLOD=1.1120;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:72.16:0,72,760	1/1:0,6:6:18.05:200,18,0	0/0:12,0:11:30.96:0,31,429	0/0:8,0:3:6.02:0,6,84	1/1:1,25:26:69.18:769,69,0	1/1:1,15:16:42.11:467,42,0	1/1:2,7:9:21.06:234,21,0	1/1:3,21:23:57.06:603,57,0	0/0:16,0:16:48.08:0,48,466	0/0:21,0:21:63.02:0,63,565	0/0:13,0:13:33.01:0,33,323	1/1:0,8:8:18.05:200,18,0	1/1:0,7:7:21.06:234,21,0	1/1:3,13:16:33.09:367,33,0	1/1:0,10:10:24.06:267,24,0	0/0:17,0:17:45.09:0,45,464	0/0:13,0:13:39.10:0,39,422	0/0:10,0:10:27.06:0,27,275	0/0:17,0:16:42.05:0,42,400	0/0:26,0:25:69.12:0,69,677	0/0:11,0:9:24.05:0,24,241	1/1:1,8:9:24.06:267,24,0	1/1:2,15:17:42.11:467,42,0	1/1:0,7:7:17.95:200,18,0	1/1:0,13:13:36.10:400,36,0	1/1:1,15:16:19.21:473,19,0	1/1:1,13:14:39.11:435,39,0	1/1:0,7:7:21.06:234,21,0
chr10	24296805	.	T	TG	5203.87	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-13.110;DP=569;FS=7.083;HRun=0;HaplotypeScore=49.1167;InbreedingCoeff=0.9997;MQ=87.02;MQ0=0;MQRankSum=-3.279;QD=44.86;ReadPosRankSum=-0.128;VQSLOD=4.5743;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:54.18:0,54,754	0/0:10,0:10:30.09:0,30,402	0/0:20,0:20:60.19:0,60,818	0/0:18,0:18:48.15:0,48,653	0/0:30,0:30:90.29:0,90,1240	0/0:20,0:20:60.19:0,60,823	0/0:19,0:19:51.17:0,51,713	0/0:28,0:28:81.26:0,81,1105	1/1:0,15:15:39.13:623,39,0	0/0:34,0:34:99:0,99,1383	0/0:22,0:22:66.22:0,66,921	0/0:19,0:19:54.18:0,54,755	0/0:19,0:19:54.17:0,54,738	0/0:29,0:29:87.29:0,87,1216	0/0:18,0:18:54.18:0,54,755	0/0:20,0:20:60.20:0,60,838	1/1:0,21:21:60.20:959,60,0	1/1:0,17:17:51.17:815,51,0	1/1:0,22:22:66.22:1032,66,0	1/1:1,20:21:57.19:911,57,0	1/1:0,20:20:54.18:863,54,0	0/0:18,0:18:54.17:0,54,738	0/0:26,0:26:72.24:0,72,1007	0/0:10,0:10:30.10:0,30,420	0/0:21,0:21:63.21:0,63,878	0/0:21,0:21:63.21:0,63,880	0/0:22,0:22:63.19:0,63,862	0/0:11,0:10:30.10:0,30,420
chr10	24297408	.	A	AG	16594.78	PASS	AB=1.000;AC=39;AF=0.696;AN=56;BaseQRankSum=8.989;DP=637;FS=5.824;HRun=3;HaplotypeScore=98.9242;InbreedingCoeff=0.9172;MQ=82.79;MQ0=0;MQRankSum=-3.302;QD=35.16;ReadPosRankSum=4.237;VQSLOD=5.0231;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:12,0:12:7.36:154,7,0	1/1:1,13:15:39.10:526,39,0	0/0:16,0:16:33.17:0,33,381	0/0:24,0:23:51.94:0,52,555	1/1:0,25:25:72.17:984,72,0	1/1:2,30:31:69.23:965,69,0	1/1:1,21:22:51.17:714,51,0	0/1:38,0:38:6.68:535,0,7	0/0:19,0:19:54.14:0,54,625	1/1:1,32:33:96.32:1344,96,0	1/1:0,25:25:69.23:964,69,0	1/1:0,15:15:39.13:546,39,0	1/1:2,17:19:54.17:742,54,0	1/1:1,23:24:66.22:923,66,0	1/1:1,28:29:72.24:1007,72,0	1/1:1,25:26:72.24:1008,72,0	0/0:19,0:19:54.17:0,54,647	0/0:15,0:15:42.08:0,42,487	0/0:20,0:20:60.14:0,60,677	0/0:34,0:34:99:0,99,1165	0/0:18,0:18:54.16:0,54,638	1/1:0,21:21:63.21:872,63,0	1/1:0,26:26:75.25:1049,75,0	1/1:1,14:15:36.12:504,36,0	1/1:1,28:29:75.25:1049,75,0	1/1:0,26:26:78.20:1029,78,0	1/1:0,29:29:87.29:1218,87,0	1/1:0,11:11:33.11:462,33,0
chr10	24297411	.	G	GA	7916.37	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=16.157;DP=643;FS=3.967;HRun=2;HaplotypeScore=131.2879;InbreedingCoeff=0.9707;MQ=81.38;MQ0=0;MQRankSum=-2.974;QD=16.70;ReadPosRankSum=4.128;VQSLOD=5.1725;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,9:12:30.04:378,30,0	1/1:14,0:14:36.78:204,37,0	0/0:15,0:15:9.40:0,9,390	0/0:23,0:22:54.90:0,55,611	1/1:26,0:26:66.45:380,66,0	1/1:32,0:31:67.14:394,67,0	1/1:23,0:23:5.83:221,6,0	1/1:11,30:41:99:1396,102,0	0/0:18,0:18:51.16:0,51,632	1/1:32,0:32:91.13:469,91,0	1/1:24,0:24:66.92:390,67,0	1/1:16,0:16:16.20:195,16,0	1/1:18,0:18:52.60:314,53,0	1/1:24,0:24:42.35:352,42,0	1/1:29,0:29:70.16:426,70,0	1/1:26,0:26:46.17:364,46,0	0/0:19,0:19:54.17:0,54,669	0/0:16,0:16:40.89:0,41,516	0/0:25,0:25:63.16:0,63,744	0/0:34,0:34:99:0,99,1214	0/0:19,0:19:54.17:0,54,669	1/1:22,0:22:61.22:380,61,0	1/1:27,0:27:52.05:400,52,0	1/1:14,0:14:34.85:194,35,0	1/1:28,0:28:72.83:424,73,0	1/1:25,0:25:66.13:358,66,0	1/1:30,0:30:84.74:498,85,0	1/1:11,0:11:31.97:178,32,0
chr10	24297424	.	TG	T	1288.66	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=2.635;DP=650;FS=13.407;HRun=3;HaplotypeScore=142.7197;InbreedingCoeff=0.9986;MQ=78.89;MQ0=0;MQRankSum=-8.086;QD=29.29;ReadPosRankSum=-3.914;VQSLOD=1.0159;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,8:8:23.94:258,24,0	0/0:14,0:14:42.14:0,42,605	0/0:12,0:13:38.80:0,39,530	0/0:20,0:19:50.49:0,50,636	0/0:28,0:28:81.27:0,81,1154	0/0:29,0:28:78.25:0,78,1102	0/0:21,0:21:51.17:0,51,733	1/1:5,31:36:93.29:1152,93,0	0/0:19,0:19:54.18:0,54,777	0/0:31,0:31:90.07:0,90,1232	0/0:24,0:24:72.22:0,72,998	0/0:12,0:12:33.10:0,33,459	0/0:22,0:22:63.16:0,63,863	0/0:22,0:22:66.20:0,66,931	0/0:28,0:28:72.22:0,72,1000	0/0:31,0:31:87.27:0,87,1217	0/0:22,0:22:63.20:0,63,879	0/0:19,0:19:54.12:0,54,731	0/0:25,0:25:75.21:0,75,1024	0/0:32,0:32:96.32:0,96,1380	0/0:26,0:26:72.24:0,72,1035	0/0:23,0:23:66.16:0,66,872	0/0:34,0:34:93.31:0,93,1335	0/0:15,0:15:42.14:0,42,605	0/0:28,0:28:72.23:0,72,1019	0/0:29,0:29:87.28:0,87,1219	0/0:28,0:28:84.28:0,84,1209	0/0:11,0:11:33.11:0,33,475
chr10	24297799	.	AT	A	12725	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=11.455;DP=595;FS=9.079;HRun=4;HaplotypeScore=114.2948;InbreedingCoeff=0.9828;MQ=81.23;MQ0=0;MQRankSum=-6.757;QD=32.97;ReadPosRankSum=2.288;VQSLOD=4.0667;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:24.08:0,24,335	1/1:1,6:7:21.06:251,21,0	0/0:26,0:26:30.66:0,31,691	0/0:17,0:17:40.77:0,41,487	1/1:6,17:23:66.05:732,66,0	1/1:0,22:22:66.20:791,66,0	1/1:3,22:25:74.57:850,75,0	0/0:35,0:35:99:0,99,1297	0/0:23,0:23:69.19:0,69,914	1/1:5,31:36:93.28:1113,93,0	1/1:1,20:21:57.13:667,57,0	1/1:0,23:23:66.20:788,66,0	1/1:1,20:21:60.16:698,60,0	1/1:4,10:14:39.08:440,39,0	1/1:4,26:30:84.25:992,84,0	1/1:0,25:25:75.23:898,75,0	0/0:15,0:15:39.12:0,39,524	0/0:10,0:10:24.04:0,24,308	0/0:10,0:10:30.09:0,30,403	0/0:28,0:28:78.25:0,78,1072	0/0:29,0:29:87.29:0,87,1218	1/1:2,20:22:63.19:754,63,0	1/1:3,21:24:66.20:788,66,0	1/1:2,8:10:24.04:264,24,0	1/1:2,24:26:72.22:862,72,0	1/1:3,16:19:51.14:598,51,0	1/1:2,32:34:99:1168,99,0	1/1:2,2:4:6.02:72,6,0
chr10	24297824	.	G	GTTTTTTGTT	3066.20	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-0.834;DP=612;FS=11.101;HRun=0;HaplotypeScore=275.0252;InbreedingCoeff=0.9283;MQ=79.17;MQ0=0;MQRankSum=-2.497;QD=55.75;ReadPosRankSum=-5.690;VQSLOD=0.9279;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:7,8:15:15:540,15,0	0/0:0,0:5:11.90:0,12,133	0/0:24,0:25:31.25:0,31,946	0/0:17,0:16:38.80:0,39,718	0/0:3,0:25:63.15:0,63,967	0/0:5,0:22:57.05:0,57,894	0/0:10,0:26:32.82:0,33,668	1/1:14,11:40:81.85:2644,82,0	0/0:18,0:19:54.13:0,54,1383	0/0:5,0:31:39.76:0,40,1093	0/0:9,0:20:23.54:0,24,509	0/0:2,0:20:60.20:0,60,958	0/0:4,0:13:36.08:0,36,510	0/0:1,0:12:33.11:0,33,515	0/0:6,0:33:74.41:0,74,1402	0/0:7,0:24:48.05:0,48,940	0/0:14,0:16:48.15:0,48,1252	0/0:12,0:15:6.65:0,7,750	0/0:21,0:21:54.18:0,54,1364	0/0:29,0:29:81.18:0,81,2045	0/0:31,0:33:69.21:0,69,1932	0/0:5,0:17:41.68:0,42,581	0/0:8,0:31:81.14:0,81,1214	0/0:5,0:15:27.03:0,27,388	0/0:1,0:24:69.62:0,70,1025	0/0:6,0:20:51.16:0,51,825	0/0:6,0:33:90.55:0,91,1344	0/0:0,0:9:27.09:0,27,427
chr10	24298121	.	G	GA	1498.11	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=0.679;DP=635;FS=0.000;HRun=6;HaplotypeScore=100.4845;InbreedingCoeff=0.9899;MQ=73.26;MQ0=0;MQRankSum=-1.773;QD=26.75;ReadPosRankSum=-2.215;VQSLOD=2.4661;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,21:23:57.18:717,57,0	0/0:10,0:10:24.05:0,24,245	0/0:23,0:23:48.68:0,49,565	0/0:15,0:15:29.93:0,30,273	0/0:30,0:30:81.18:0,81,826	0/0:23,0:23:63.04:0,63,615	0/0:22,0:22:57.08:0,57,561	1/1:8,25:32:75.19:903,75,0	0/0:19,0:19:51.11:0,51,520	0/0:25,0:25:69.14:0,69,699	0/0:32,0:32:78.17:0,78,795	0/0:12,0:12:36.06:0,36,360	0/0:26,0:26:69.10:0,69,687	0/0:26,0:26:66.09:0,66,653	0/0:24,0:24:60.12:0,60,607	0/0:20,0:20:57.13:0,57,581	0/0:15,0:15:42.05:0,42,417	0/0:6,0:6:15.03:0,15,152	0/0:35,0:35:96.16:0,96,961	0/0:25,0:25:72.16:0,72,734	0/0:26,0:26:66.07:0,66,647	0/0:27,0:27:60.13:0,60,612	0/0:23,0:23:66.15:0,66,672	0/0:9,0:9:27.06:0,27,275	0/0:25,0:25:69.09:0,69,690	0/0:32,0:31:81.16:0,81,815	0/0:35,0:35:90.19:0,90,917	0/0:13,0:13:39.06:0,39,388
chr10	24298262	.	TGC	T	4875.38	PASS	AB=0.975;AC=44;AF=0.786;AN=56;BaseQRankSum=-0.887;DP=583;FS=15.352;HRun=0;HaplotypeScore=131.7105;InbreedingCoeff=-0.0649;MQ=52.66;MQ0=14;MQRankSum=0.958;QD=8.91;ReadPosRankSum=2.272;VQSLOD=3.5717;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:20,1:22:14.74:182,15,0	0/1:5,1:6:21.48:40,0,21	0/1:39,0:15:12.34:12,0,91	0/0:36,0:11:2.89:0,3,144	1/1:26,6:30:41.15:388,41,0	1/1:7,21:26:8.04:75,8,0	1/1:19,2:21:34.36:452,34,0	1/1:9,0:7:18.01:165,18,0	0/1:22,0:22:6.82:7,0,100	1/1:12,2:12:31.53:296,32,0	1/1:18,5:22:22.60:350,23,0	1/1:14,3:17:19.96:207,20,0	1/1:18,3:20:30.35:251,30,0	1/1:13,2:15:15.94:171,16,0	0/1:19,0:18:55.14:198,0,55	1/1:13,3:15:19.37:268,19,0	0/1:19,1:20:47.85:48,0,157	0/1:14,1:15:56.16:56,0,61	0/1:19,0:18:9.89:10,0,157	0/1:23,0:23:52.09:52,0,95	0/1:41,0:41:32.43:32,0,223	0/1:18,0:17:0.84:116,0,1	1/1:14,0:14:23.90:214,24,0	1/1:19,3:22:30.34:267,30,0	1/1:9,13:20:5.63:60,6,0	1/1:16,2:14:15.97:294,16,0	1/1:19,3:22:42.34:444,42,0	1/1:9,0:8:23.86:219,24,0
chr10	24298264	.	CGT	C	1716.90	PASS	AB=0.991;AC=30;AF=0.556;AN=54;BaseQRankSum=-4.974;DP=578;FS=11.811;HRun=0;HaplotypeScore=144.0227;InbreedingCoeff=-0.2185;MQ=52.86;MQ0=14;MQRankSum=0.512;QD=3.92;ReadPosRankSum=6.762;VQSLOD=0.9048;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:2.90:0,3,19	0/1:6,0:6:0.33:0,0,25	0/0:36,0:12:0:0,0,0	0/0:36,0:11:1.55:0,2,4	0/1:31,0:29:9.11:56,0,9	0/1:27,0:25:13.24:20,0,13	0/1:22,0:22:4.75:55,0,5	./.	1/1:24,0:24:19.92:180,20,0	0/1:14,0:12:20.32:59,0,20	0/1:24,0:23:13.80:87,0,14	0/1:17,0:17:13.06:26,0,13	0/1:20,0:19:17.59:18,0,41	0/1:15,0:15:14.42:14,0,23	0/0:21,0:20:3.81:0,4,238	0/1:17,0:16:37.90:68,0,38	0/1:18,3:21:53.29:182,0,53	1/1:13,1:14:29.88:254,30,0	1/1:19,0:18:18.82:144,19,0	1/1:20,1:21:6.16:221,6,0	1/1:37,3:40:6.08:249,6,0	0/0:20,0:19:2.66:0,3,37	1/1:13,0:13:2.94:20,3,0	0/1:22,0:22:11.09:35,0,11	1/1:22,0:20:1.12:17,1,0	0/1:19,0:15:58.03:64,0,58	0/1:21,0:21:55.36:55,0,68	1/1:9,0:8:2.72:37,3,0
chr10	24298283	.	G	GTGTC	2725.10	PASS	AB=0.892;AC=27;AF=0.482;AN=56;BaseQRankSum=1.436;DP=559;FS=23.270;HRun=0;HaplotypeScore=160.8113;InbreedingCoeff=-0.4188;MQ=49.41;MQ0=11;MQRankSum=1.956;QD=5.94;ReadPosRankSum=5.488;VQSLOD=0.5196;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:21.39:0,21,160	1/1:1,0:6:3.01:56,3,0	0/0:18,0:5:11.83:0,12,96	0/0:28,0:6:16.71:0,17,140	0/1:29,0:28:26.44:26,0,169	0/1:21,0:19:23:108,0,23	0/1:21,0:21:99:126,0,118	0/0:8,0:7:14.84:0,15,68	0/1:23,0:23:25.25:122,0,25	0/1:10,0:20:70.86:266,0,71	0/1:18,4:23:59.53:60,0,150	0/1:7,7:15:28.25:121,0,28	0/1:10,1:20:51.50:266,0,52	0/1:8,0:17:41.06:58,0,41	0/1:19,0:18:99:124,0,235	0/1:22,0:22:99:177,0,118	0/1:21,0:20:11.66:108,0,12	0/1:15,0:15:28.80:74,0,29	0/1:18,0:18:12.98:193,0,13	1/1:26,0:26:32.01:218,32,0	1/1:40,0:40:10.03:198,10,0	1/1:7,0:16:5.16:88,5,0	0/1:11,0:12:28.88:29,0,46	0/1:26,0:26:98.59:119,0,99	0/0:22,0:21:6.84:0,7,51	0/1:13,0:19:99:115,0,111	0/1:16,1:17:91.72:211,0,92	0/1:6,0:5:28.90:29,0,59
chr10	24298287	.	G	GTC	2607.48	PASS	AB=0.933;AC=21;AF=0.375;AN=56;BaseQRankSum=2.552;DP=561;FS=5.010;HRun=0;HaplotypeScore=151.1612;InbreedingCoeff=0.0290;MQ=51.94;MQ0=10;MQRankSum=0.530;QD=7.43;ReadPosRankSum=5.773;VQSLOD=2.9553;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:23.37:0,23,182	1/1:6,0:6:9.12:67,9,0	0/0:17,0:5:5.10:0,5,55	0/0:24,0:7:11.02:0,11,114	0/1:30,0:29:3.61:4,0,116	0/0:19,0:18:6.66:0,7,86	0/0:20,0:20:2.16:0,2,156	0/0:7,0:7:16.25:0,16,71	1/1:5,19:24:34.44:504,34,0	0/1:19,0:18:40.10:40,0,159	0/0:26,0:25:14.49:0,14,117	0/1:17,0:17:23.52:60,0,24	0/1:21,0:20:25.10:56,0,25	0/1:19,0:19:21.29:21,0,23	0/0:19,0:18:21.63:0,22,261	0/1:23,0:22:19.58:20,0,148	0/1:10,13:22:2:390,0,2	0/1:13,2:15:20.54:259,0,21	0/1:9,9:18:81.79:219,0,82	1/1:5,22:27:20.51:538,21,0	1/1:15,24:41:22.99:522,23,0	0/1:16,0:16:21.59:29,0,22	0/1:13,0:13:1.31:1,0,62	0/0:26,0:26:27.05:0,27,264	0/0:22,0:21:9.74:0,10,62	0/1:22,0:19:1.48:1,0,178	0/1:16,1:17:44.50:44,0,104	0/0:5,0:4:4.36:0,4,30
chr10	24298288	.	T	TA	194.30	PASS	AB=1.000;AC=4;AF=0.071;AN=56;BaseQRankSum=2.378;DP=553;FS=22.767;HRun=0;HaplotypeScore=152.7952;InbreedingCoeff=0.5813;MQ=51.84;MQ0=11;MQRankSum=0.389;QD=6.48;ReadPosRankSum=-4.141;VQSLOD=1.1925;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:33.06:0,33,386	0/1:6,0:6:1.48:9,0,1	0/0:17,0:5:14.02:0,14,148	0/0:24,0:7:20.74:0,21,243	0/0:29,0:28:34.88:0,35,402	0/0:19,0:18:21.05:0,21,251	0/0:20,0:20:44.92:0,45,526	1/1:2,6:7:21.01:283,21,0	0/0:23,0:23:37.45:0,37,286	0/0:19,0:18:51.19:0,51,595	0/0:26,0:25:37.74:0,38,375	0/0:17,0:17:17.58:0,18,147	0/0:21,0:20:27.43:0,27,251	0/0:18,0:18:16.24:0,16,141	0/0:18,0:17:36.05:0,36,469	0/0:22,0:21:38.13:0,38,422	0/0:23,0:22:37.58:0,38,298	0/0:15,0:15:44.02:0,44,377	0/0:19,0:19:52.89:0,53,575	0/0:27,0:27:36.40:0,36,220	0/0:40,0:40:39.41:0,39,246	0/1:16,0:16:7.31:7,0,78	0/0:12,0:12:14.59:0,15,164	0/0:25,0:25:44.81:0,45,555	0/0:22,0:21:10.11:0,10,109	0/0:22,0:19:50.68:0,51,585	0/0:16,0:16:38.87:0,39,434	0/0:4,0:3:9.02:0,9,100
chr10	24298291	.	CTGTG	C	381.13	PASS	AB=0.963;AC=10;AF=0.179;AN=56;BaseQRankSum=-3.760;DP=545;FS=8.944;HRun=0;HaplotypeScore=167.1671;InbreedingCoeff=0.0831;MQ=52.14;MQ0=9;MQRankSum=0.331;QD=2.06;ReadPosRankSum=-1.798;VQSLOD=1.7731;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:12.69:0,13,78	0/0:6,0:6:11.84:0,12,92	0/0:17,0:7:15.35:0,15,120	0/0:20,0:8:11.77:0,12,56	0/1:29,0:28:1.68:2,0,216	0/0:16,0:15:5.68:0,6,51	0/0:20,0:20:19.57:0,20,214	0/0:9,0:8:1.99:0,2,5	0/1:20,3:23:31.73:154,0,32	0/0:18,0:18:35.20:0,35,379	0/0:26,0:25:11.98:0,12,61	0/0:17,0:17:6.02:0,6,90	0/0:19,0:19:15.36:0,15,171	0/0:18,0:18:7.64:0,8,67	0/0:18,0:17:15.49:0,15,172	0/0:22,0:21:12.81:0,13,131	0/1:21,1:21:7.80:8,0,33	0/1:14,1:15:38.98:102,0,39	0/1:21,0:21:51.85:191,0,52	0/0:25,0:25:19.37:0,19,105	0/1:40,0:40:23.03:34,0,23	0/0:15,0:16:13.78:0,14,78	1/1:12,0:12:1.77:8,2,0	0/0:24,0:24:11.38:0,11,129	1/1:23,0:22:0.13:1,0,0	0/0:23,0:20:22.90:0,23,290	0/0:16,0:16:18.68:0,19,254	0/0:4,0:3:0.47:0,0,1
chr10	24298295	.	G	GTGTC	4286.56	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=-1.671;DP=550;FS=0.977;HRun=0;HaplotypeScore=158.4539;InbreedingCoeff=0.2472;MQ=52.29;MQ0=9;MQRankSum=1.187;QD=14.10;ReadPosRankSum=4.140;VQSLOD=4.6739;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:28.92:0,29,205	1/1:6,0:6:3:29,3,0	0/0:20,0:10:23.32:0,23,258	0/0:20,0:9:17.85:0,18,161	0/0:29,0:28:23.48:0,23,173	0/0:17,0:16:14.78:0,15,112	0/0:19,0:19:32.11:0,32,220	0/0:11,0:10:23.29:0,23,129	1/1:23,0:23:40.38:840,40,0	0/1:17,0:17:28.91:29,0,235	0/1:28,0:27:20.56:21,0,168	0/1:17,0:17:63.30:63,0,68	0/1:19,0:19:64.18:105,0,64	0/1:19,0:19:22.40:22,0,34	0/1:16,0:15:20.83:21,0,106	0/0:22,0:21:19.63:0,20,249	1/1:21,1:21:13.80:619,14,0	0/1:15,0:15:23.28:428,0,23	1/1:20,0:20:33.48:514,33,0	1/1:29,0:29:47.77:791,48,0	1/1:39,3:42:44.47:728,44,0	0/1:16,0:16:28.32:32,0,28	0/0:12,0:12:6.73:0,7,89	0/0:24,0:24:41.48:0,41,315	0/0:19,0:18:11.16:0,11,78	0/0:23,0:20:16.05:0,16,267	0/1:15,0:15:44.73:45,0,95	0/0:4,0:3:0.89:0,1,2
chr10	24298696	.	TGG	T	2121.06	PASS	AB=0.875;AC=20;AF=0.357;AN=56;BaseQRankSum=5.968;DP=364;FS=24.287;HRun=12;HaplotypeScore=54.8644;InbreedingCoeff=0.4772;MQ=76.20;MQ0=2;MQRankSum=-0.045;QD=11.16;ReadPosRankSum=5.729;VQSLOD=0.1467;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,14:14:33:335,33,0	0/0:5,0:5:8.52:0,9,98	0/0:15,0:11:8.85:0,9,70	0/1:15,1:16:24.74:87,0,25	0/0:9,0:10:3.01:0,3,45	0/0:17,0:17:14.90:0,15,163	0/0:16,0:18:23.55:0,24,301	1/1:10,20:30:57.93:592,58,0	1/1:1,7:8:21.05:214,21,0	0/1:7,0:7:0:0,0,0	0/0:12,0:12:5.98:0,6,48	0/0:9,0:10:11.50:0,11,96	0/0:10,0:10:3:0,3,25	0/0:12,0:12:9.01:0,9,95	0/0:10,0:13:11.01:0,11,103	0/0:11,0:13:14:0,14,131	0/1:7,7:13:1.23:171,0,1	1/1:2,3:5:9.02:91,9,0	1/1:13,4:18:20.72:194,21,0	1/1:7,14:21:41.55:405,42,0	1/1:4,6:11:20.51:176,21,0	0/0:7,0:7:2.97:0,3,20	0/0:14,0:15:2.50:0,2,9	0/1:7,1:8:15.49:15,0,125	0/0:11,0:11:11.96:0,12,155	0/1:17,1:18:18.98:19,0,87	0/1:14,0:18:3.22:3,0,202	0/0:6,0:6:6.02:0,6,89
chr10	24298790	.	C	CG	2015.20	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=4.722;DP=561;FS=0.544;HRun=1;HaplotypeScore=85.4761;InbreedingCoeff=0.9448;MQ=88.90;MQ0=1;MQRankSum=-4.200;QD=36.64;ReadPosRankSum=-4.566;VQSLOD=2.1783;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,18:19:48.12:694,48,0	0/0:7,0:7:21.07:0,21,273	0/0:22,0:22:48.83:0,49,639	0/0:19,0:19:43.38:0,43,548	0/0:27,0:27:78.25:0,78,1012	0/0:29,0:29:87.28:0,87,1129	0/0:16,0:16:48.16:0,48,623	1/1:2,33:35:99:1443,99,0	0/0:12,0:12:33.08:0,33,411	0/0:33,0:33:96.30:0,96,1232	0/0:23,0:23:69.22:0,69,896	0/0:19,0:19:54.18:0,54,700	0/0:14,0:14:42.14:0,42,545	0/0:23,0:23:66.21:0,66,857	0/0:19,0:19:57.19:0,57,740	0/0:23,0:23:66.21:0,66,857	0/0:11,0:10:27.09:0,27,350	0/0:2,0:2:6.02:0,6,78	0/0:15,0:15:42.14:0,42,545	0/0:27,0:27:81.26:0,81,1050	0/0:20,0:20:54.18:0,54,701	0/0:25,0:25:72.23:0,72,935	0/0:20,0:20:57.19:0,57,740	0/0:8,0:8:24.08:0,24,312	0/0:23,0:23:69.22:0,69,894	0/0:27,0:27:81.26:0,81,1051	0/0:32,0:32:90.29:0,90,1168	0/0:10,0:10:30.10:0,30,389
chr10	24299684	.	A	AATGT	21001	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=0.957;DP=676;FS=4.364;HRun=0;HaplotypeScore=109.5987;InbreedingCoeff=0.9856;MQ=62.05;MQ0=2;MQRankSum=-2.165;QD=46.05;ReadPosRankSum=3.549;VQSLOD=5.5523;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:48.04:0,48,714	1/1:3,4:7:12.04:286,12,0	0/0:12,0:12:14.22:0,14,250	0/0:15,0:15:30.05:0,30,403	1/1:10,36:46:86.99:1861,87,0	1/1:10,19:28:48.16:1172,48,0	1/1:8,12:22:33.11:787,33,0	0/0:47,0:47:78.26:0,78,1281	0/0:22,0:22:51.17:0,51,852	1/1:12,30:43:96.20:2232,96,0	1/1:7,17:24:42.14:1031,42,0	1/1:5,17:22:48.16:1186,48,0	1/1:6,18:24:51.11:1180,51,0	1/1:6,22:30:63.22:1552,63,0	1/1:9,19:29:51.17:1254,51,0	1/1:8,22:30:57.20:1408,57,0	0/0:16,0:16:33.07:0,33,498	0/0:17,0:17:19.39:0,19,410	0/0:9,0:9:12.04:0,12,201	0/0:33,0:33:84.24:0,84,1301	0/0:29,0:29:72.25:0,72,1200	1/1:5,14:19:27.09:662,27,0	1/1:6,16:22:42.14:1038,42,0	1/1:7,18:26:39.13:956,39,0	1/1:1,18:19:48.16:1187,48,0	1/1:7,19:26:57.18:1286,57,0	1/1:4,22:29:60.21:1477,60,0	1/1:0,8:8:18.06:445,18,0
chr10	24300027	.	A	AT	7870.60	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=10.046;DP=353;FS=25.089;HRun=1;HaplotypeScore=63.1441;InbreedingCoeff=0.9435;MQ=59.20;MQ0=4;MQRankSum=3.416;QD=36.61;ReadPosRankSum=1.025;VQSLOD=2.9308;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:63.13:0,63,769	1/1:1,2:3:6.02:90,6,0	0/0:9,0:6:18.02:0,18,195	0/0:2,0:1:3.01:0,3,39	1/1:0,30:30:81.03:1068,81,0	1/1:1,14:15:33.04:467,33,0	1/1:0,10:10:21.07:297,21,0	0/0:22,0:22:63.14:0,63,750	0/0:14,0:14:39.13:0,39,506	1/1:0,17:17:48.16:718,48,0	1/1:0,14:14:33.11:476,33,0	1/1:0,6:6:15.05:225,15,0	1/1:0,11:11:33.11:494,33,0	1/1:0,13:13:27.09:403,27,0	1/1:1,14:14:36.12:539,36,0	1/1:0,8:8:24.08:359,24,0	0/0:16,0:16:39.06:0,39,471	0/0:8,0:8:21.07:0,21,272	0/0:13,0:11:33.07:0,33,385	0/0:14,0:14:39.07:0,39,485	0/0:17,0:15:42.12:0,42,530	1/1:0,9:9:27.05:373,27,0	1/1:1,7:8:21.07:307,21,0	1/1:0,13:13:30.10:449,30,0	1/1:0,14:14:33.11:494,33,0	1/1:0,10:10:30.10:448,30,0	1/1:1,15:16:36.12:531,36,0	1/1:0,3:3:9.03:135,9,0
chr10	24300213	.	AAC	A	245.41	PASS	AB=1.000;AC=25;AF=0.833;AN=30;BaseQRankSum=3.317;DP=170;FS=2.645;HRun=0;HaplotypeScore=46.4435;InbreedingCoeff=0.2670;MQ=64.71;MQ0=10;MQRankSum=2.721;QD=3.56;ReadPosRankSum=3.317;VQSLOD=1.5033;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:15,0:10:0.89:0,1,2	./.	1/1:4,0:4:2.98:21,3,0	1/1:3,3:6:2.98:21,3,0	1/1:4,0:3:2.98:21,3,0	0/0:19,0:17:11.65:0,12,72	./.	1/1:4,0:4:3.44:22,3,0	1/1:4,1:5:2.98:21,3,0	./.	./.	./.	1/1:5,0:4:3.92:22,4,0	1/1:4,0:4:2.99:23,3,0	./.	0/1:2,0:2:0:0,0,0	./.	./.	./.	./.	1/1:8,1:9:7.77:46,8,0	1/1:3,3:6:8.93:62,9,0	1/1:4,4:7:2.98:21,3,0	1/1:4,0:4:5.90:37,6,0	1/1:8,0:7:2.45:20,2,0	./.
chr10	24300287	.	TAGAGAGAGAG	T	266.81	PASS	AC=8;AF=0.571;AN=14;BaseQRankSum=0.452;DP=86;FS=0.000;HRun=0;HaplotypeScore=29.6204;MQ=29.78;MQ0=19;MQRankSum=-0.710;QD=13.34;ReadPosRankSum=1.743;VQSLOD=0.5177;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	0/0:6,0:1:3.01:0,3,88	./.	./.	1/1:1,1:1:3.01:85,3,0	0/0:14,0:16:4.41:0,4,156	0/0:2,0:2:1.55:0,2,4	./.	./.	./.	./.	./.	./.	1/1:1,6:7:3.48:87,3,0	1/1:9,0:5:3.01:90,3,0	./.	./.	./.	./.	./.	./.	./.	./.	1/1:2,0:2:3.01:85,3,0	./.	./.
chr10	24301339	.	G	GA	10989.35	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-10.925;DP=550;FS=0.382;HRun=8;HaplotypeScore=52.7886;InbreedingCoeff=0.9974;MQ=83.83;MQ0=0;MQRankSum=-3.559;QD=26.74;ReadPosRankSum=1.481;VQSLOD=5.4651;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,23:24:63.19:727,63,0	1/1:1,6:7:18.05:208,18,0	0/0:18,0:18:35.75:0,36,294	0/0:19,0:18:32.73:0,33,290	1/1:5,17:22:26.65:546,27,0	1/1:2,21:24:60.01:672,60,0	1/1:1,17:18:42.12:485,42,0	1/1:6,1:34:77.59:415,78,0	0/0:14,0:14:39.02:0,39,357	1/1:3,15:18:45.12:510,45,0	1/1:3,21:24:38.69:685,39,0	1/1:3,15:18:45.13:518,45,0	1/1:5,19:24:57.16:649,57,0	1/1:2,18:20:48.11:540,48,0	1/1:1,24:25:66.20:762,66,0	1/1:5,22:27:44.75:768,45,0	0/0:22,0:22:60.02:0,60,549	0/0:7,0:7:21.01:0,21,192	0/0:16,0:16:48.03:0,48,439	0/0:18,0:18:47.99:0,48,430	0/0:23,2:25:34.42:0,34,569	1/1:0,10:10:27.04:297,27,0	1/1:1,14:15:39.11:442,39,0	1/1:2,18:20:48.14:554,48,0	1/1:4,22:26:32.71:630,33,0	1/1:4,14:18:42.10:473,42,0	1/1:1,21:22:54.16:623,54,0	1/1:1,14:15:42.12:485,42,0
chr10	24301447	.	CAG	C	2027.73	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.368;DP=508;FS=2.688;HRun=0;HaplotypeScore=56.7100;InbreedingCoeff=0.9969;MQ=82.92;MQ0=0;MQRankSum=-3.445;QD=36.87;ReadPosRankSum=-1.819;VQSLOD=5.0742;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,20:21:54.18:795,54,0	0/0:10,0:10:30.08:0,30,527	0/0:17,0:17:48.16:0,48,871	0/0:11,0:11:30.07:0,30,508	0/0:25,0:25:72.25:0,72,1341	0/0:25,0:25:72.25:0,72,1340	0/0:19,0:19:54.17:0,54,980	1/1:2,32:34:96.28:1354,96,0	0/0:13,0:13:39.13:0,39,723	0/0:16,0:16:48.16:0,48,891	0/0:26,0:26:75.24:0,75,1366	0/0:14,0:14:42.14:0,42,786	0/0:20,0:20:60.21:0,60,1121	0/0:21,0:21:60.21:0,60,1105	0/0:15,0:15:42.14:0,42,787	0/0:23,0:23:69.21:0,69,1229	0/0:36,0:36:99:0,105,1965	0/0:14,0:14:42.14:0,42,781	0/0:19,0:19:51.16:0,51,919	0/0:21,0:21:63.22:0,63,1180	0/0:15,0:15:45.15:0,45,843	0/0:11,0:11:33.11:0,33,609	0/0:17,0:17:51.17:0,51,955	0/0:11,0:11:30.06:0,30,526	0/0:17,0:17:51.17:0,51,946	0/0:16,0:16:48.16:0,48,894	0/0:14,0:14:39.12:0,39,687	0/0:7,0:7:21.07:0,21,393
chr10	24301551	.	AT	A	7684.18	PASS	AC=34;AF=0.630;AN=54;BaseQRankSum=10.469;DP=437;FS=3.392;HRun=5;HaplotypeScore=47.9845;InbreedingCoeff=0.9880;MQ=76.71;MQ0=0;MQRankSum=-0.583;QD=29.00;ReadPosRankSum=4.644;VQSLOD=5.0356;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:69.23:0,69,943	1/1:1,9:10:20.90:223,21,0	0/0:10,0:9:18.06:0,18,240	0/0:12,0:12:18.04:0,18,226	1/1:2,24:26:69.15:768,69,0	1/1:0,15:15:39.11:442,39,0	1/1:2,5:7:15.04:170,15,0	0/0:29,0:29:78.20:0,78,1014	0/0:7,0:7:15.05:0,15,205	1/1:1,12:13:36.08:390,36,0	1/1:0,20:20:57.16:646,57,0	1/1:0,9:9:27.08:306,27,0	1/1:0,17:17:42.12:476,42,0	1/1:2,15:17:42.12:476,42,0	1/1:1,14:15:39.11:442,39,0	1/1:1,20:21:54.15:613,54,0	0/0:29,0:29:84.24:0,84,1094	0/0:11,0:11:27.09:0,27,368	0/0:18,0:18:45.13:0,45,585	0/0:28,0:28:81.23:0,81,1061	0/0:5,0:5:15.03:0,15,188	1/1:2,11:13:33.05:360,33,0	1/1:2,15:17:39.11:442,39,0	./.	1/1:1,11:12:30.09:340,30,0	1/1:1,23:24:69.18:771,69,0	1/1:0,19:19:54.15:612,54,0	1/1:0,10:10:18.05:204,18,0
chr10	24301956	.	CTGTT	C	15367.08	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=9.094;DP=609;FS=2.432;HRun=0;HaplotypeScore=131.9235;InbreedingCoeff=0.9909;MQ=66.22;MQ0=0;MQRankSum=-7.730;QD=39.50;ReadPosRankSum=3.625;VQSLOD=5.2880;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:36:84.26:0,84,1030	1/1:3,5:8:15.05:258,15,0	0/0:13,0:13:14.95:0,15,369	0/0:12,0:11:18.06:0,18,405	1/1:2,34:36:79.17:1420,79,0	1/1:3,24:27:69.24:1217,69,0	1/1:0,12:11:33.11:580,33,0	0/0:36,0:36:84.20:0,84,969	0/0:19,0:19:48.16:0,48,1156	1/1:4,16:20:48.14:792,48,0	1/1:2,20:22:51.13:851,51,0	1/1:0,18:18:51.17:887,51,0	1/1:4,27:31:71.75:1229,72,0	1/1:2,29:31:78.20:1314,78,0	1/1:3,22:25:66.23:1161,66,0	1/1:3,22:25:48.16:847,48,0	0/0:24,0:24:60.17:0,60,1346	0/0:17,0:17:48.10:0,48,1085	0/0:18,0:18:42.13:0,42,838	0/0:25,0:25:75.24:0,75,1768	0/0:18,0:18:48.13:0,48,1093	1/1:3,19:21:54.14:889,54,0	1/1:2,14:16:33.11:580,33,0	1/1:2,7:9:15.02:234,15,0	1/1:3,14:17:30.10:516,30,0	1/1:8,24:32:72.19:1218,72,0	1/1:7,22:29:57.20:1003,57,0	1/1:0,9:9:21.07:370,21,0
chr10	24301963	.	TTTG	T	7362.66	PASS	AB=0.983;AC=31;AF=0.554;AN=56;BaseQRankSum=13.125;DP=598;FS=3.667;HRun=0;HaplotypeScore=150.8678;InbreedingCoeff=0.5715;MQ=63.58;MQ0=0;MQRankSum=-6.794;QD=19.27;ReadPosRankSum=7.448;VQSLOD=4.2679;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:33:83.80:0,84,682	1/1:6,0:6:14.99:128,15,0	0/0:15,0:13:20.17:0,20,326	0/0:11,0:9:16.79:0,17,342	0/1:38,1:39:55.64:665,0,56	1/1:24,0:24:69.04:618,69,0	1/1:13,0:12:10.27:276,10,0	0/0:35,0:35:94.85:0,95,771	0/0:21,0:21:63.16:0,63,1139	1/1:18,0:18:1.95:376,2,0	0/1:24,0:24:17.55:381,0,18	1/1:19,0:19:53.37:459,53,0	0/1:32,1:33:20.09:580,0,20	0/1:33,1:34:13.40:620,0,13	1/1:23,1:24:42.99:563,43,0	1/1:24,0:24:25.12:404,25,0	0/0:20,0:20:60.16:0,60,1132	0/0:16,0:16:48.10:0,48,926	0/0:19,0:19:57.10:0,57,845	0/0:28,0:28:84.24:0,84,1616	0/0:17,0:17:51.14:0,51,983	1/1:22,0:21:8.28:415,8,0	1/1:16,1:17:33.01:294,33,0	1/1:7,0:7:14.99:130,15,0	1/1:16,0:16:29.99:263,30,0	1/1:27,0:27:2.92:547,3,0	1/1:24,0:24:34.27:484,34,0	0/1:11,0:11:25.07:161,0,25
chr10	24302607	.	C	CCCCCGT	7618.01	PASS	AB=0.545;AC=31;AF=0.674;AN=46;BaseQRankSum=7.766;DP=308;FS=0.000;HRun=0;HaplotypeScore=53.3351;InbreedingCoeff=0.6127;MQ=16.93;MQ0=185;MQRankSum=0.478;QD=59.52;ReadPosRankSum=4.005;VQSLOD=4.8161;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:1:3.01:0,3,76	0/1:1,5:6:57.75:535,0,58	./.	./.	1/1:1,8:8:24.08:843,24,0	1/1:5,2:2:6.02:221,6,0	0/0:15,0:1:3.01:0,3,76	./.	0/0:19,0:9:24.08:0,24,606	1/1:1,8:9:27.09:983,27,0	1/1:1,4:4:12.04:438,12,0	1/1:7,3:5:9.03:329,9,0	1/1:8,6:6:15.05:546,15,0	1/1:7,2:2:6.02:218,6,0	1/1:2,2:2:6.02:221,6,0	1/1:3,3:3:9.03:331,9,0	0/0:28,0:3:9.03:0,9,227	0/0:23,0:1:3.01:0,3,76	0/0:11,0:1:3.01:0,3,76	0/0:16,0:15:42.14:0,42,1024	./.	1/1:2,6:6:18.06:659,18,0	1/1:0,5:5:15.05:549,15,0	1/1:9,1:1:3.01:110,3,0	1/1:3,9:8:24.08:882,24,0	1/1:4,3:3:9.03:331,9,0	1/1:2,4:4:12.04:421,12,0	./.
chr10	24302609	.	G	GA	3171.13	PASS	AB=0.643;AC=31;AF=0.674;AN=46;BaseQRankSum=8.064;DP=328;FS=0.000;HRun=1;HaplotypeScore=76.3019;InbreedingCoeff=0.6202;MQ=17.81;MQ0=183;MQRankSum=-1.643;QD=21.28;ReadPosRankSum=2.613;VQSLOD=3.7972;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:1:3.01:0,3,39	0/1:4,5:9:17.81:235,0,18	./.	./.	1/1:4,8:11:30.09:393,30,0	1/1:5,2:2:6.02:86,6,0	0/0:15,0:1:3.01:0,3,39	./.	0/0:19,0:9:24.08:0,24,311	1/1:4,9:12:36.09:497,36,0	1/1:2,4:5:12.04:167,12,0	1/1:7,3:5:9.03:127,9,0	1/1:8,6:6:15.05:211,15,0	1/1:6,2:2:6.02:84,6,0	1/1:2,2:2:6.02:86,6,0	1/1:3,3:3:9.03:129,9,0	0/0:26,0:3:9.03:0,9,117	0/0:23,0:1:3.01:0,3,39	0/0:10,0:1:3.01:0,3,39	0/0:16,0:15:42.13:0,42,527	./.	1/1:6,6:10:27.05:359,27,0	1/1:4,5:8:15.05:212,15,0	1/1:9,1:1:3.01:42,3,0	1/1:6,9:9:27.09:381,27,0	1/1:5,3:4:12.04:172,12,0	1/1:2,3:4:12.03:149,12,0	./.
chr10	24302617	.	GT	G	3130.61	PASS	AB=0.529;AC=33;AF=0.750;AN=44;BaseQRankSum=6.882;DP=339;FS=0.000;HRun=1;HaplotypeScore=71.8331;InbreedingCoeff=0.6043;MQ=17.14;MQ0=201;MQRankSum=-0.049;QD=17.20;ReadPosRankSum=0.830;VQSLOD=3.7450;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:30,1:1:3.01:42,3,0	0/1:1,8:9:19.05:244,0,19	./.	./.	1/1:1,11:11:27.09:372,27,0	1/1:5,2:2:6.02:83,6,0	./.	./.	0/0:17,0:8:17.88:0,18,198	1/1:2,12:12:36.12:499,36,0	1/1:1,5:5:12.04:166,12,0	1/1:6,2:3:8.99:103,9,0	1/1:8,5:6:14.96:164,15,0	1/1:7,1:2:5.98:61,6,0	1/1:2,2:2:6.02:83,6,0	1/1:5,2:3:8.99:103,9,0	0/0:27,0:3:12.04:0,12,179	0/0:22,0:1:3.01:0,3,47	0/0:12,0:1:2.98:0,3,21	0/0:13,0:12:30.10:0,30,474	./.	1/1:2,10:10:27.09:370,27,0	1/1:1,9:9:21:266,21,0	1/1:12,1:1:3.01:41,3,0	1/1:3,11:9:27.05:352,27,0	1/1:4,4:4:12.04:166,12,0	1/1:2,4:4:12.04:166,12,0	./.
chr10	24302913	.	A	AG	593.09	PASS	AC=20;AF=0.909;AN=22;DP=43;FS=0.000;HRun=5;HaplotypeScore=9.9708;InbreedingCoeff=0.0348;MQ=20.98;MQ0=16;QD=18.53;VQSLOD=1.3004;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,2:3:3.01:39,3,0	./.	./.	0/0:3,0:1:0.47:0,0,1	./.	./.	1/1:0,1:1:3.01:34,3,0	1/1:3,6:7:15.05:197,15,0	1/1:0,1:1:3.01:39,3,0	./.	1/1:0,1:1:3.01:39,3,0	./.	./.	./.	1/1:1,2:2:6.02:79,6,0	1/1:0,1:1:3.01:39,3,0	./.	./.	1/1:1,2:2:6.02:79,6,0	./.	./.	./.	./.	1/1:1,2:2:6.02:79,6,0	./.	./.	./.	1/1:2,1:1:3.01:39,3,0
chr10	24303075	.	GATA	G	150.80	PASS	AB=1.000;AC=3;AF=0.079;AN=38;BaseQRankSum=-0.364;DP=100;FS=17.573;HRun=0;HaplotypeScore=25.7341;InbreedingCoeff=0.2148;MQ=78.99;MQ0=1;MQRankSum=-1.334;QD=13.71;ReadPosRankSum=1.161;VQSLOD=1.1388;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,4:8:18.02:218,18,0	0/0:1,0:3:3.01:0,3,39	./.	0/0:2,0:2:2.98:0,3,21	0/0:1,0:1:3:0,3,27	0/0:1,0:5:3.01:0,3,39	./.	0/0:24,0:23:21.96:0,22,193	./.	0/0:2,0:2:3:0,3,29	0/0:2,0:2:2.97:0,3,20	./.	0/0:2,0:2:0:0,0,0	0/0:2,0:2:4.21:0,4,23	0/1:3,0:3:25.65:26,0,99	0/0:3,0:3:9.03:0,9,176	0/0:5,0:5:5.93:0,6,40	./.	0/0:3,0:3:3.01:0,3,57	./.	./.	./.	./.	0/0:2,0:2:0:0,0,0	0/0:4,0:4:7.75:0,8,44	0/0:2,0:2:6.02:0,6,75	0/0:1,0:1:1.82:0,2,5	0/0:5,0:5:9.03:0,9,123
chr10	24306466	.	CTGTGTGTGTGTGTG	C	1738.82	PASS	AB=0.882;AC=10;AF=0.179;AN=56;BaseQRankSum=6.599;DP=605;FS=15.407;HRun=0;HaplotypeScore=204.8462;InbreedingCoeff=0.6599;MQ=69.66;MQ0=14;MQRankSum=-5.394;QD=12.88;ReadPosRankSum=0.718;VQSLOD=1.7108;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:3.01:0,3,55	0/0:13,0:13:24.08:0,24,1020	0/0:36,0:25:6.02:0,6,171	0/0:42,0:27:3.01:0,3,42	0/0:21,0:22:24.08:0,24,1344	0/0:27,0:27:33.57:0,34,1660	0/0:23,0:23:30.09:0,30,1246	0/0:33,0:32:13.86:0,14,334	1/1:9,6:19:27.09:976,27,0	0/0:22,0:22:37.01:0,37,1761	0/0:8,0:14:27.08:0,27,1099	0/0:12,0:11:12.04:0,12,723	0/0:14,0:14:24.08:0,24,1267	0/0:18,0:18:23.82:0,24,1272	0/0:21,0:24:30.10:0,30,1511	0/0:14,0:15:30.10:0,30,1597	1/1:21,2:22:2.40:116,2,0	0/1:19,4:23:99:104,0,244	1/1:19,3:21:9.02:299,9,0	1/1:22,4:27:12.04:390,12,0	0/1:19,2:20:0:0,0,0	0/0:12,0:12:24.08:0,24,1317	0/0:18,0:20:27.09:0,27,1153	0/0:17,0:23:27.09:0,27,1292	0/0:12,0:22:15.72:0,16,1099	0/0:16,0:16:30.10:0,30,1765	0/0:28,0:28:47.78:0,48,2734	0/0:12,0:11:21.07:0,21,1272
chr10	24308462	.	TA	T	421.68	PASS	AC=2;AF=0.037;AN=54;BaseQRankSum=5.970;DP=324;FS=0.000;HRun=6;HaplotypeScore=31.7520;InbreedingCoeff=0.6597;MQ=64.42;MQ0=0;MQRankSum=-0.087;QD=22.19;ReadPosRankSum=1.880;VQSLOD=2.1934;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,18:19:48.12:516,48,0	0/0:9,0:9:24.08:0,24,315	0/0:4,0:3:6.02:0,6,79	0/0:9,0:9:18.02:0,18,195	0/0:22,0:21:54.18:0,54,710	0/0:27,0:27:75.20:0,75,950	0/0:5,0:5:12.04:0,12,158	0/0:35,0:35:93.29:0,93,1210	0/0:5,0:5:9.02:0,9,106	0/0:18,0:18:51.17:0,51,671	0/0:15,0:15:39.13:0,39,513	0/0:9,0:9:24.08:0,24,316	0/0:12,0:12:33.11:0,33,434	0/0:9,0:9:21.07:0,21,275	0/0:4,0:4:12.04:0,12,157	0/0:8,0:8:18.06:0,18,236	0/0:8,0:8:21.07:0,21,276	0/0:12,0:12:33.11:0,33,428	0/0:19,0:19:57.19:0,57,750	0/0:9,0:9:24.08:0,24,316	./.	0/0:2,0:2:6.01:0,6,65	0/0:4,0:4:12.04:0,12,158	0/0:2,0:2:6.02:0,6,79	0/0:15,0:15:33.11:0,33,434	0/0:14,0:14:39.08:0,39,483	0/0:14,0:14:36.12:0,36,473	0/0:14,0:14:39.12:0,39,501
chr10	24309376	.	A	AT	29799.75	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-9.907;DP=723;FS=2.789;HRun=0;HaplotypeScore=66.8417;InbreedingCoeff=0.9997;MQ=86.01;MQ0=0;MQRankSum=-10.817;QD=44.02;ReadPosRankSum=6.102;VQSLOD=4.8387;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:0,28:28:78.27:1246,78,0	1/1:0,20:20:54.18:863,54,0	0/0:22,0:22:61.71:0,62,760	0/0:23,0:23:60.73:0,61,772	1/1:0,30:30:84.22:1311,84,0	1/1:0,26:26:66.23:1055,66,0	1/1:1,20:21:54.18:863,54,0	1/1:1,39:40:99:1820,117,0	1/1:0,13:13:33.11:527,33,0	1/1:0,28:28:84.29:1343,84,0	1/1:0,20:21:60.20:949,60,0	1/1:0,37:37:99:1724,108,0	1/1:1,33:35:93.28:1476,93,0	1/1:1,31:32:87.30:1390,87,0	1/1:1,24:25:66.19:1055,66,0	1/1:0,25:25:66.23:1055,66,0	1/1:1,26:27:75.26:1198,75,0	1/1:0,11:11:33:495,33,0	1/1:1,27:28:81.26:1271,81,0	1/1:0,34:34:99:1630,102,0	1/1:0,24:24:66.23:1055,66,0	1/1:0,17:17:39.13:623,39,0	1/1:0,26:26:69.24:1103,69,0	1/1:0,20:20:57.19:911,57,0	1/1:0,24:24:69.24:1103,69,0	1/1:0,27:27:78.22:1197,78,0	1/1:1,38:39:99:1674,105,0	1/1:0,19:19:54.18:863,54,0
chr10	24309945	.	G	GA	15498.05	PASS	AB=0.531;AC=49;AF=0.875;AN=56;BaseQRankSum=0.296;DP=546;FS=16.178;HRun=7;HaplotypeScore=111.1098;InbreedingCoeff=0.8218;MQ=78.92;MQ0=0;MQRankSum=-3.040;QD=30.27;ReadPosRankSum=2.852;VQSLOD=3.3532;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:27.04:0,27,259	1/1:1,17:18:42.13:507,42,0	0/0:14,0:13:23.73:0,24,216	0/0:10,0:11:20.77:0,21,174	1/1:0,20:20:54.17:652,54,0	1/1:1,18:19:51.16:616,51,0	1/1:1,9:10:27.08:326,27,0	1/1:7,27:34:81.23:956,81,0	1/1:1,10:11:27.08:326,27,0	1/1:6,25:31:49.30:876,49,0	1/1:0,21:21:63.19:761,63,0	1/1:0,21:21:57.17:689,57,0	1/1:1,21:22:60.16:725,60,0	1/1:5,20:25:51.16:616,51,0	1/1:3,23:26:66.20:797,66,0	1/1:0,21:21:57.17:689,57,0	1/1:2,17:19:22.23:551,22,0	1/1:0,8:8:21.06:254,21,0	1/1:2,17:19:51.16:616,51,0	1/1:5,22:27:66.17:782,66,0	0/1:2,15:17:9.79:459,0,10	1/1:1,11:12:27.55:327,28,0	1/1:4,19:23:57.16:673,57,0	1/1:0,21:21:57.17:687,57,0	1/1:1,15:16:45.14:543,45,0	1/1:3,19:22:57.17:678,57,0	1/1:3,33:35:61.31:1022,61,0	1/1:2,11:13:7.14:370,7,0
chr10	24310656	.	CTG	C	17801.49	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=9.348;DP=509;FS=0.000;HRun=0;HaplotypeScore=192.4665;InbreedingCoeff=0.9046;MQ=62.94;MQ0=0;MQRankSum=-10.100;QD=38.95;ReadPosRankSum=2.198;VQSLOD=5.2376;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:87.27:0,87,1694	1/1:0,11:11:33.11:485,33,0	0/0:9,0:9:9.72:0,10,310	0/0:12,1:14:15.96:0,16,476	1/1:0,29:29:72.16:1032,72,0	1/1:0,28:28:78.26:1147,78,0	1/1:0,10:10:30.10:441,30,0	1/1:0,19:19:57.19:839,57,0	1/1:1,19:20:57.19:838,57,0	1/1:0,17:17:50.96:718,51,0	1/1:0,23:23:69.23:1014,69,0	1/1:0,26:26:78.26:1147,78,0	1/1:27,0:27:3.01:37,3,0	1/1:0,19:19:54.18:794,54,0	1/1:1,21:22:54.18:794,54,0	1/1:0,23:24:72.24:1058,72,0	1/1:0,14:14:42.14:618,42,0	1/1:1,5:6:12.04:177,12,0	1/1:0,17:17:51.17:750,51,0	1/1:0,19:19:54.18:794,54,0	1/1:0,8:8:18.06:265,18,0	1/1:0,20:20:57.19:838,57,0	1/1:1,18:19:57.19:838,57,0	1/1:1,11:12:30.10:441,30,0	1/1:1,14:15:33.11:485,33,0	1/1:0,18:18:54.18:794,54,0	1/1:0,23:23:69.23:1015,69,0	1/1:1,10:11:30.10:441,30,0
chr10	24310657	.	TGG	T	17812.06	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=8.639;DP=501;FS=0.000;HRun=3;HaplotypeScore=188.8867;InbreedingCoeff=0.9043;MQ=63.03;MQ0=0;MQRankSum=-9.770;QD=39.58;ReadPosRankSum=1.676;VQSLOD=4.0122;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:81.28:0,81,1555	1/1:11,0:11:33.11:485,33,0	0/0:9,0:9:9.51:0,10,268	0/0:14,0:14:16.42:0,16,417	1/1:29,0:29:72.16:1032,72,0	1/1:28,0:27:78.26:1147,78,0	1/1:10,0:10:30.10:441,30,0	1/1:19,0:19:57.19:839,57,0	1/1:19,0:19:57.19:838,57,0	1/1:17,0:17:51.04:720,51,0	1/1:23,0:23:69.23:1014,69,0	1/1:26,0:26:78.26:1147,78,0	1/1:0,26:26:3.01:46,3,0	1/1:19,0:19:54.18:794,54,0	1/1:21,0:21:54.18:794,54,0	1/1:24,0:24:72.24:1058,72,0	1/1:14,0:14:42.14:618,42,0	1/1:5,0:5:12.04:177,12,0	1/1:17,0:17:51.17:750,51,0	1/1:19,0:19:54.18:794,54,0	1/1:8,0:8:18.06:265,18,0	1/1:20,0:20:57.19:838,57,0	1/1:19,0:19:57.19:838,57,0	1/1:11,0:11:30.10:441,30,0	1/1:14,0:14:33.11:485,33,0	1/1:18,0:18:54.18:794,54,0	1/1:23,0:23:69.23:1015,69,0	1/1:10,0:10:30.10:441,30,0
chr10	24313708	.	A	AGT	4303.38	PASS	AC=48;AF=0.889;AN=54;BaseQRankSum=0.307;DP=422;FS=0.739;HRun=0;HaplotypeScore=148.8165;InbreedingCoeff=0.6645;MQ=61.02;MQ0=1;MQRankSum=-2.212;QD=12.73;ReadPosRankSum=-1.526;VQSLOD=4.3422;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:42.20:0,42,440	1/1:8,0:8:9:88,9,0	0/0:12,0:9:10.36:0,10,130	0/0:20,0:13:12.16:0,12,109	./.	1/1:10,4:14:11.97:153,12,0	1/1:15,0:15:12.01:122,12,0	1/1:19,0:19:53.82:446,54,0	1/1:7,3:10:15:166,15,0	1/1:0,16:16:20.98:198,21,0	1/1:11,4:15:11.24:115,11,0	1/1:10,0:10:9.44:77,9,0	1/1:8,3:11:2.40:151,2,0	1/1:9,3:12:13.62:109,14,0	1/1:6,1:7:5.99:50,6,0	1/1:5,2:7:9.01:104,9,0	1/1:2,19:21:6.96:78,7,0	1/1:14,3:17:44.78:430,45,0	1/1:15,1:16:38.61:415,39,0	1/1:17,0:17:20.96:171,21,0	1/1:8,2:10:3:25,3,0	1/1:17,3:20:14.89:117,15,0	1/1:12,1:13:2.94:27,3,0	1/1:11,1:12:11.93:98,12,0	1/1:11,7:18:14.03:116,14,0	1/1:14,3:17:21.12:381,21,0	1/1:15,4:19:24.21:337,24,0	1/1:12,2:14:33.41:330,33,0
chr10	24313718	.	C	CGCGT	2144.32	PASS	AB=0.970;AC=32;AF=0.593;AN=54;BaseQRankSum=6.274;DP=433;FS=2.497;HRun=0;HaplotypeScore=181.0709;InbreedingCoeff=0.2778;MQ=50.88;MQ0=5;MQRankSum=-7.647;QD=7.50;ReadPosRankSum=4.418;VQSLOD=2.4328;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:63.13:0,63,1075	1/1:6,0:6:2.99:24,3,0	0/1:9,0:4:1.03:1,0,15	0/0:16,0:8:8.98:0,9,43	0/0:21,0:21:0.71:0,1,2	1/1:13,1:14:9.03:122,9,0	1/1:16,0:16:2.62:46,3,0	0/0:9,0:9:15.35:0,15,66	1/1:11,0:10:9.01:133,9,0	0/1:16,1:17:12.47:94,0,12	0/1:15,1:16:33.71:58,0,34	0/1:11,0:11:0:0,0,0	1/1:14,1:15:11.98:156,12,0	1/1:14,1:14:1.99:48,2,0	./.	1/1:7,2:9:6.02:132,6,0	1/1:15,2:17:5.83:68,6,0	0/1:14,1:15:40.47:287,0,40	1/1:20,0:20:27.35:374,27,0	0/0:18,0:18:1.66:0,2,6	0/1:14,1:15:0:0,0,0	0/0:7,8:20:6.18:0,6,27	0/0:17,0:17:1.55:0,2,5	0/1:13,0:13:0.17:0,0,0	1/1:19,2:21:2.66:20,3,0	1/1:16,1:17:19.42:332,19,0	1/1:12,3:15:0.48:280,0,0	0/1:14,0:13:33.28:116,0,33
chr10	24313720	.	C	CGT	1217.18	PASS	AB=0.917;AC=25;AF=0.463;AN=54;BaseQRankSum=6.729;DP=436;FS=0.000;HRun=0;HaplotypeScore=177.5153;InbreedingCoeff=0.1095;MQ=50.60;MQ0=5;MQRankSum=-7.816;QD=4.61;ReadPosRankSum=6.887;VQSLOD=2.0556;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:63.11:0,63,882	1/1:6,0:6:2.99:23,3,0	0/0:8,0:3:3.45:0,3,22	0/0:16,0:8:11.48:0,11,51	0/0:20,2:21:3.30:0,3,20	1/1:10,4:14:9.03:118,9,0	1/1:16,0:16:2.55:32,3,0	0/0:11,0:11:15.34:0,15,66	1/1:8,4:11:9.01:130,9,0	0/1:17,0:17:17.84:18,0,64	0/1:13,3:16:12.46:12,0,35	0/1:11,0:11:0:0,0,0	0/1:12,3:15:14.04:85,0,14	0/0:15,1:15:7.71:0,8,35	./.	1/1:9,0:9:5.99:50,6,0	1/1:15,3:18:9.95:109,10,0	0/1:13,2:15:27.49:175,0,27	0/1:19,2:21:41.67:218,0,42	0/0:17,0:17:1.82:0,2,6	0/1:14,1:15:0:0,0,0	0/0:19,1:20:6.49:0,6,28	0/0:16,1:17:1.48:0,1,4	0/1:12,1:13:0.19:0,0,0	1/1:18,3:21:4.94:25,5,0	0/1:16,1:17:12.94:157,0,13	0/1:14,1:15:14.48:110,0,14	0/1:11,2:12:55.35:108,0,55
chr10	24313732	.	AGTGTGT	A	239.60	PASS	AB=1.000;AC=7;AF=0.130;AN=54;BaseQRankSum=-0.616;DP=453;FS=2.517;HRun=0;HaplotypeScore=191.6299;InbreedingCoeff=0.2544;MQ=47.20;MQ0=8;MQRankSum=-1.396;QD=2.26;ReadPosRankSum=-1.074;VQSLOD=2.7593;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,17:37:9.74:188,10,0	0/0:3,0:3:3.01:0,3,34	0/0:7,0:3:0:0,0,0	./.	0/0:26,0:25:19:0,19,268	0/0:13,0:13:8.52:0,9,111	0/0:16,0:16:9.97:0,10,130	0/0:17,0:16:35.70:0,36,453	0/0:11,0:10:9.50:0,10,131	0/0:18,0:18:32.04:0,32,482	0/0:14,0:14:4.88:0,5,122	0/0:13,0:13:9.02:0,9,95	0/0:16,0:16:15.03:0,15,227	0/0:13,0:12:14.10:0,14,255	0/0:11,0:10:9.02:0,9,90	0/0:11,0:11:14.91:0,15,252	0/1:20,0:19:32.51:47,0,33	0/1:12,0:12:82.89:83,0,122	0/1:22,0:22:20.16:20,0,51	0/0:18,0:18:5.67:0,6,28	1/1:15,0:14:3:25,3,0	0/0:18,0:18:7.04:0,7,61	0/0:17,0:17:2.98:0,3,33	0/0:14,0:14:6.38:0,6,55	0/0:23,0:23:14.46:0,14,168	0/0:17,0:17:30.73:0,31,468	0/0:18,0:18:37.56:0,38,552	0/0:14,0:13:21.90:0,22,291
chr10	24315066	.	AT	A	11049.28	PASS	AB=1.000;AC=51;AF=0.911;AN=56;BaseQRankSum=2.448;DP=432;FS=3.280;HRun=7;HaplotypeScore=94.6092;InbreedingCoeff=0.7271;MQ=69.21;MQ0=0;MQRankSum=-3.166;QD=26.62;ReadPosRankSum=2.605;VQSLOD=5.3247;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:8:24.08:0,24,302	1/1:0,7:7:21.05:214,21,0	0/0:9,0:9:20.28:0,20,247	0/1:3,0:3:17.57:18,0,60	1/1:0,34:34:87.19:887,87,0	1/1:1,18:19:57.12:575,57,0	1/1:1,9:10:27.06:276,27,0	1/1:3,21:24:52.41:602,52,0	1/1:1,10:11:30.07:306,30,0	1/1:2,20:22:60.13:612,60,0	1/1:1,18:19:51.11:520,51,0	1/1:0,12:12:30.07:306,30,0	1/1:0,16:16:48.11:490,48,0	1/1:0,21:21:57.13:581,57,0	1/1:2,11:13:30.06:306,30,0	1/1:2,17:19:51.12:520,51,0	1/1:1,6:7:9.91:94,10,0	1/1:0,13:13:39.09:397,39,0	1/1:6,11:17:45.08:443,45,0	1/1:2,16:18:51.11:520,51,0	1/1:1,7:8:21.05:214,21,0	1/1:3,2:5:6.01:61,6,0	1/1:2,10:12:30.07:306,30,0	1/1:1,9:10:24.05:245,24,0	1/1:2,20:22:60.13:612,60,0	1/1:2,24:26:72.12:719,72,0	1/1:2,25:27:63.14:643,63,0	1/1:0,20:20:57.13:582,57,0
chr10	24315201	.	GT	G	11331.92	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=4.949;DP=388;FS=1.818;HRun=5;HaplotypeScore=78.4388;InbreedingCoeff=0.9021;MQ=68.64;MQ0=0;MQRankSum=-3.014;QD=31.05;ReadPosRankSum=2.055;VQSLOD=5.5603;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:42.13:0,42,557	1/1:0,5:5:15.04:170,15,0	0/0:6,0:6:18.05:0,18,231	0/0:3,0:3:6.02:0,6,71	1/1:2,22:24:66.19:748,66,0	1/1:1,19:20:54.15:612,54,0	1/1:0,7:7:15.04:170,15,0	1/1:3,28:31:81.14:863,81,0	1/1:1,8:9:21.06:238,21,0	1/1:2,15:17:48.14:544,48,0	1/1:1,16:17:48.14:544,48,0	1/1:0,6:6:18.05:204,18,0	1/1:1,14:15:42.12:476,42,0	1/1:1,15:16:42.12:476,42,0	1/1:0,14:14:36.10:408,36,0	1/1:0,12:12:33.09:374,33,0	1/1:1,16:17:48.14:544,48,0	1/1:1,18:19:51.15:578,51,0	1/1:0,12:12:36.09:400,36,0	1/1:0,22:22:63.18:714,63,0	1/1:1,6:7:18.05:204,18,0	1/1:0,2:2:6.02:68,6,0	1/1:1,12:13:36.10:408,36,0	1/1:0,7:7:18.05:204,18,0	1/1:0,13:13:39.11:442,39,0	1/1:1,19:20:60.17:680,60,0	1/1:2,18:20:54.15:611,54,0	1/1:0,20:20:57.16:647,57,0
chr10	24316593	.	A	AAG	16131.28	PASS	AB=1.000;AC=51;AF=0.911;AN=56;BaseQRankSum=7.690;DP=502;FS=8.262;HRun=0;HaplotypeScore=166.7672;InbreedingCoeff=0.7174;MQ=54.59;MQ0=16;MQRankSum=-5.865;QD=36.33;ReadPosRankSum=0.781;VQSLOD=5.8000;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:34:96.21:0,96,1304	1/1:2,6:8:24.01:368,24,0	0/0:23,0:9:19.20:0,19,191	0/1:20,0:10:24.46:24,0,138	1/1:10,13:20:50.82:722,51,0	1/1:6,10:14:42:630,42,0	1/1:8,3:11:26.89:313,27,0	1/1:2,27:29:80.90:1052,81,0	1/1:4,17:21:63.08:997,63,0	1/1:9,12:21:62.81:838,63,0	1/1:7,17:23:60.03:910,60,0	1/1:9,15:21:57.01:859,57,0	1/1:7,14:19:54.06:832,54,0	1/1:9,14:21:60:866,60,0	1/1:7,15:22:60.03:915,60,0	1/1:8,8:14:38.91:544,39,0	1/1:2,9:10:24.97:423,25,0	1/1:1,8:9:21.04:338,21,0	1/1:8,9:16:47.96:645,48,0	1/1:6,13:17:51.10:787,51,0	1/1:1,4:5:9.03:140,9,0	1/1:6,7:13:33.01:484,33,0	1/1:8,12:18:50.99:763,51,0	1/1:4,5:7:15.05:244,15,0	1/1:3,13:15:45.07:676,45,0	1/1:9,11:19:48.03:721,48,0	1/1:7,15:21:60.09:932,60,0	1/1:2,2:3:6.02:106,6,0
chr10	24316634	.	GA	G	8653.95	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=8.630;DP=440;FS=11.300;HRun=7;HaplotypeScore=188.0854;InbreedingCoeff=0.8002;MQ=44.97;MQ0=4;MQRankSum=-7.173;QD=23.33;ReadPosRankSum=-0.213;VQSLOD=2.5793;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:81.25:0,81,1002	1/1:1,4:5:12.01:114,12,0	0/0:26,0:15:2.81:0,3,109	0/0:15,0:7:12.04:0,12,147	1/1:1,19:20:57.05:524,57,0	1/1:1,11:12:33.04:310,33,0	1/1:2,9:11:30.04:285,30,0	1/1:11,18:28:50.23:499,50,0	1/1:3,10:13:30.04:288,30,0	1/1:2,19:21:57.03:542,57,0	1/1:4,18:22:53.76:474,54,0	1/1:7,7:13:21.01:192,21,0	1/1:2,24:25:69.09:652,69,0	1/1:3,15:17:42.03:387,42,0	1/1:2,17:19:51.06:478,51,0	1/1:0,15:15:45.06:425,45,0	1/1:2,6:8:4.33:157,4,0	1/1:2,5:7:12.02:117,12,0	1/1:2,17:18:51.05:495,51,0	1/1:2,15:16:36.03:331,36,0	1/1:0,3:3:6.01:56,6,0	1/1:0,8:8:24.02:223,24,0	1/1:2,12:14:38.83:346,39,0	1/1:1,7:8:10.43:105,10,0	1/1:0,20:20:60.06:557,60,0	1/1:1,15:16:45.08:442,45,0	1/1:0,19:19:54.08:514,54,0	1/1:2,5:7:15.02:141,15,0
chr10	24316647	.	A	AG	3982.31	PASS	AB=0.631;AC=46;AF=0.821;AN=56;BaseQRankSum=9.992;DP=428;FS=4.492;HRun=1;HaplotypeScore=204.8467;InbreedingCoeff=0.3773;MQ=35.44;MQ0=1;MQRankSum=-7.097;QD=10.68;ReadPosRankSum=7.483;VQSLOD=1.9077;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:84.26:0,84,1155	1/1:1,3:4:11.72:69,12,0	0/0:17,0:10:1.14:0,1,134	0/0:9,0:5:9.03:0,9,126	1/1:3,19:22:49.44:247,49,0	1/1:3,12:15:33.70:183,34,0	1/1:2,7:9:22.57:133,23,0	0/1:18,8:25:99:116,0,152	1/1:7,7:14:11.84:127,12,0	1/1:5,16:21:14.86:312,15,0	1/1:8,15:23:39.63:201,40,0	1/1:2,8:9:22.27:126,22,0	0/1:6,20:25:1.29:245,0,1	1/1:5,11:15:3.56:135,4,0	1/1:4,13:17:37.81:213,38,0	1/1:1,14:15:27.29:215,27,0	1/1:3,5:8:10.01:66,10,0	1/1:1,4:5:11.83:78,12,0	1/1:6,12:17:17.04:236,17,0	1/1:4,11:14:21.24:163,21,0	1/1:1,4:5:8.34:37,8,0	1/1:2,7:9:19.32:97,19,0	1/1:2,11:13:31.76:171,32,0	1/1:7,6:13:10.53:57,11,0	1/1:3,16:19:46.29:260,46,0	0/1:6,12:18:43.76:190,0,44	0/1:7,15:22:32.29:172,0,32	1/1:2,8:10:8.06:132,8,0
chr10	24316648	.	A	AG	4158.29	PASS	AB=0.630;AC=45;AF=0.804;AN=56;BaseQRankSum=9.177;DP=439;FS=8.502;HRun=0;HaplotypeScore=211.1503;InbreedingCoeff=0.3861;MQ=35.94;MQ0=1;MQRankSum=-6.901;QD=10.80;ReadPosRankSum=7.712;VQSLOD=2.1850;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:84.28:0,84,1171	1/1:2,3:5:11.72:69,12,0	0/0:17,0:10:16.80:0,17,173	0/0:8,0:5:9.03:0,9,126	1/1:5,19:24:50.57:263,51,0	1/1:4,12:16:36.63:200,37,0	1/1:2,7:9:22.64:148,23,0	0/1:22,8:29:99:129,0,128	1/1:8,7:15:9.74:129,10,0	1/1:5,16:21:3.07:282,3,0	1/1:8,15:23:48.42:270,48,0	1/1:2,8:9:23.47:142,23,0	0/1:6,20:25:5.40:257,0,5	1/1:5,11:15:17.86:175,18,0	1/1:4,13:17:37.97:218,38,0	1/1:2,14:16:24.44:215,24,0	1/1:3,5:8:10.20:67,10,0	1/1:1,4:5:11.83:78,12,0	0/1:6,12:17:17.72:198,0,18	1/1:4,11:14:21.68:167,22,0	1/1:2,4:6:8.36:37,8,0	1/1:2,7:9:19.34:100,19,0	1/1:2,11:13:31.93:176,32,0	1/1:7,6:13:11.29:61,11,0	1/1:4,16:20:46.59:265,47,0	0/1:6,12:18:3.31:198,0,3	0/1:7,15:22:17.14:178,0,17	1/1:2,8:10:10.35:135,10,0
chr10	24316679	.	TA	T	6385.39	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=8.294;DP=376;FS=13.935;HRun=11;HaplotypeScore=160.5938;InbreedingCoeff=0.9042;MQ=53.98;MQ0=1;MQRankSum=-7.033;QD=19.47;ReadPosRankSum=2.254;VQSLOD=3.9438;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:52.97:0,53,556	1/1:1,8:9:22.31:194,22,0	0/0:14,0:10:17.33:0,17,137	0/0:11,0:10:24.02:0,24,229	1/1:3,18:21:47.82:384,48,0	1/1:1,16:17:45.81:367,46,0	1/1:0,8:8:23.95:193,24,0	1/1:6,13:18:35.53:276,36,0	1/1:0,11:11:32.96:270,33,0	1/1:4,5:9:14.93:123,15,0	1/1:5,14:19:41.86:336,42,0	1/1:4,13:17:38.90:314,39,0	1/1:3,20:23:57.80:469,58,0	1/1:3,9:12:26.95:221,27,0	1/1:3,13:16:41.79:334,42,0	1/1:2,9:11:26.94:221,27,0	1/1:1,6:7:17.43:141,17,0	1/1:3,0:3:2.98:24,3,0	1/1:2,10:10:26.96:221,27,0	1/1:1,10:11:32.89:260,33,0	1/1:0,4:5:9.84:71,10,0	1/1:1,10:12:29.94:242,30,0	1/1:1,10:11:29.94:242,30,0	1/1:3,5:8:14.90:114,15,0	1/1:3,20:23:59.86:485,60,0	1/1:2,12:15:36.83:298,37,0	1/1:2,15:17:41.92:344,42,0	1/1:1,9:10:29.95:242,30,0
chr10	24316747	.	T	TG	17407.65	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-4.477;DP=511;FS=4.201;HRun=0;HaplotypeScore=71.1751;InbreedingCoeff=0.9724;MQ=64.04;MQ0=0;MQRankSum=-4.380;QD=36.65;ReadPosRankSum=2.451;VQSLOD=4.9200;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:57.16:0,57,768	1/1:2,12:14:39.04:503,39,0	0/0:13,0:13:34.91:0,35,315	0/0:3,0:3:9.03:0,9,125	1/1:2,26:28:72.21:1007,72,0	1/1:1,19:19:50.80:681,51,0	1/1:0,11:11:30.10:428,30,0	1/1:2,43:44:88.04:1598,88,0	1/1:4,10:14:41.96:527,42,0	1/1:2,19:21:63.16:830,63,0	1/1:0,20:20:60.12:827,60,0	1/1:4,14:18:44.96:561,45,0	1/1:1,19:20:51.16:717,51,0	1/1:2,17:18:51.15:705,51,0	1/1:2,18:20:48.12:655,48,0	1/1:0,13:12:27.08:383,27,0	1/1:1,11:12:32.95:419,33,0	1/1:2,5:6:15.04:212,15,0	1/1:2,16:18:54.04:665,54,0	1/1:0,24:24:66.10:893,66,0	1/1:1,11:12:36.10:494,36,0	1/1:0,15:15:36.03:475,36,0	1/1:0,20:20:54.11:744,54,0	1/1:3,10:13:36.03:486,36,0	1/1:5,27:32:93.19:1229,93,0	1/1:0,28:28:78.25:1097,78,0	1/1:0,15:15:45.15:633,45,0	1/1:0,16:16:45.15:642,45,0
chr10	24317021	.	A	AAT	28087.88	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-7.122;DP=615;FS=1.722;HRun=0;HaplotypeScore=58.9881;InbreedingCoeff=0.9942;MQ=78.60;MQ0=3;MQRankSum=-8.116;QD=47.93;ReadPosRankSum=4.372;VQSLOD=5.7789;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,13:14:36.12:674,36,0	1/1:0,11:11:24.08:449,24,0	0/0:13,0:12:30.06:0,30,397	0/0:16,0:16:39.03:0,39,522	1/1:2,40:42:99:2110,114,0	1/1:0,21:21:51.17:955,51,0	1/1:1,19:21:57.20:1065,57,0	1/1:4,29:34:84.26:1495,84,0	1/1:1,21:23:63.22:1178,63,0	1/1:2,30:32:90.31:1675,90,0	1/1:1,17:18:42.14:778,42,0	1/1:0,20:20:57.20:1067,57,0	1/1:3,18:21:48.16:879,48,0	1/1:2,22:24:63.22:1165,63,0	1/1:1,24:25:66.23:1236,66,0	1/1:0,24:24:66.23:1236,66,0	1/1:1,23:23:57.20:1065,57,0	1/1:0,6:6:18.06:337,18,0	1/1:0,19:19:57.20:1061,57,0	1/1:0,21:21:60.21:1105,60,0	1/1:1,26:27:66.23:1236,66,0	1/1:0,14:14:39.13:728,39,0	1/1:1,13:14:33.11:617,33,0	1/1:1,17:20:39.13:730,39,0	1/1:1,24:23:63.22:1177,63,0	1/1:0,34:34:99:1880,102,0	1/1:1,31:32:81.28:1517,81,0	1/1:3,15:18:36.12:674,36,0
chr10	24317575	.	TC	T	15410.72	PASS	AB=1.000;AC=51;AF=0.911;AN=56;BaseQRankSum=-1.712;DP=590;FS=7.814;HRun=5;HaplotypeScore=62.3240;InbreedingCoeff=0.7678;MQ=80.96;MQ0=0;MQRankSum=-6.874;QD=27.72;ReadPosRankSum=7.046;VQSLOD=4.1475;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:23:25.74:26,0,80	1/1:0,9:9:24.06:272,24,0	0/0:24,0:23:62.67:0,63,730	0/0:10,0:10:23.83:0,24,317	1/1:3,25:28:72.05:771,72,0	1/1:1,16:17:48.14:543,48,0	1/1:4,8:12:12.03:136,12,0	1/1:5,21:26:49.23:671,49,0	1/1:0,15:15:42.12:476,42,0	1/1:1,27:28:81.18:881,81,0	1/1:1,24:25:66.08:717,66,0	1/1:0,18:18:48.14:544,48,0	1/1:2,29:31:78.22:882,78,0	1/1:1,28:29:75.21:847,75,0	1/1:0,25:25:72.21:816,72,0	1/1:0,23:23:60.17:680,60,0	1/1:2,19:21:57.03:626,57,0	1/1:2,15:17:45.10:496,45,0	1/1:2,14:16:39.09:426,39,0	1/1:0,20:20:57.11:631,57,0	1/1:0,19:19:33.09:374,33,0	1/1:0,25:25:69.11:753,69,0	1/1:0,18:18:48.08:528,48,0	1/1:0,10:10:30.03:324,30,0	1/1:1,21:22:54.15:610,54,0	1/1:0,33:33:99:1093,99,0	1/1:2,35:37:85:1012,85,0	1/1:1,8:9:24.07:272,24,0
chr10	24318424	.	AG	A	1096.24	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-4.084;DP=620;FS=9.081;HRun=5;HaplotypeScore=92.1040;InbreedingCoeff=0.9777;MQ=86.44;MQ0=0;MQRankSum=-3.866;QD=25.49;ReadPosRankSum=2.600;VQSLOD=2.8625;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,41:43:99:1191,105,0	0/0:6,0:6:18.06:0,18,246	0/0:28,0:28:78.19:0,78,1034	0/0:31,0:31:81.09:0,81,1064	0/0:20,0:20:57.17:0,57,762	0/0:27,0:27:75.25:0,75,1026	0/0:23,1:24:35.19:0,35,869	0/0:33,0:33:90.28:0,90,1203	0/0:14,0:14:42.14:0,42,573	0/0:33,0:33:90.27:0,90,1188	0/0:21,0:21:63.21:0,63,861	0/0:34,0:34:93.25:0,93,1234	0/0:27,0:27:69.21:0,69,925	0/0:23,0:23:57.16:0,57,759	0/0:26,0:26:72.24:0,72,985	0/0:29,0:29:84.27:0,84,1133	0/0:24,0:24:66.18:0,66,881	0/0:7,0:7:21.07:0,21,287	0/0:12,0:12:30.09:0,30,393	0/0:24,0:24:72.24:0,72,980	0/0:18,0:18:51.17:0,51,698	0/0:16,0:16:48.16:0,48,654	0/0:8,0:8:24.08:0,24,328	0/0:21,0:21:60.14:0,60,779	0/0:16,0:16:42.13:0,42,560	0/0:26,0:26:78.24:0,78,1039	0/0:23,0:22:66.22:0,66,899	0/0:6,0:6:18.06:0,18,246
chr10	24319420	.	GA	G	245.77	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-3.959;DP=568;FS=4.442;HRun=5;HaplotypeScore=106.3598;InbreedingCoeff=0.9856;MQ=82.82;MQ0=0;MQRankSum=-3.522;QD=24.58;ReadPosRankSum=1.509;VQSLOD=2.3631;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,10:10:30.09:340,30,0	0/0:8,0:8:18.06:0,18,246	0/0:14,0:14:36.12:0,36,483	0/0:21,0:21:50.65:0,51,654	0/0:29,0:29:81.25:0,81,1087	0/0:17,0:17:51.14:0,51,676	0/0:20,0:20:57.18:0,57,763	0/0:31,0:31:87.26:0,87,1159	0/0:13,0:13:39.13:0,39,534	0/0:30,0:30:84.28:0,84,1149	0/0:27,0:27:81.22:0,81,1071	0/0:23,0:23:69.23:0,69,944	0/0:21,0:21:57.14:0,57,724	0/0:26,0:26:72.24:0,72,985	0/0:16,0:16:45.14:0,45,600	0/0:21,0:21:63.14:0,63,821	0/0:15,0:15:39.13:0,39,533	0/0:10,0:10:24.08:0,24,324	0/0:16,0:16:45.15:0,45,616	0/0:36,0:36:99:0,99,1291	0/0:12,0:12:36.12:0,36,493	0/0:17,0:17:48.16:0,48,655	0/0:26,0:26:72.24:0,72,984	0/0:17,0:17:42.14:0,42,575	0/0:24,0:24:63.17:0,63,841	0/0:23,0:23:69.19:0,69,923	0/0:37,0:37:99:0,99,1333	0/0:8,0:8:21.54:0,22,288
chr10	24319505	.	A	AT	23552.49	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=7.495;DP=563;FS=3.560;HRun=3;HaplotypeScore=133.2482;InbreedingCoeff=0.9803;MQ=77.81;MQ0=0;MQRankSum=-8.910;QD=44.02;ReadPosRankSum=5.208;VQSLOD=3.3895;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,9:9:24.08:369,24,0	1/1:0,5:5:12.04:192,12,0	0/0:18,0:18:54.18:0,54,744	0/0:10,0:10:30.10:0,30,412	1/1:0,42:42:99:1854,117,0	1/1:0,26:26:72.25:1147,72,0	1/1:0,11:11:33.11:525,33,0	1/1:0,21:21:63.19:929,63,0	1/1:0,10:10:27.09:430,27,0	1/1:0,22:22:66.22:1040,66,0	1/1:1,26:27:72.25:1149,72,0	1/1:0,16:16:48.16:765,48,0	1/1:0,24:25:71.98:1126,72,0	1/1:1,20:21:60.20:944,60,0	1/1:0,17:17:48.16:753,48,0	1/1:0,19:19:57.19:907,57,0	1/1:0,15:15:39.13:610,39,0	1/1:0,10:10:27.09:428,27,0	1/1:1,17:18:54.17:839,54,0	1/1:0,33:33:90.31:1435,90,0	1/1:0,11:11:24.08:372,24,0	1/1:1,27:28:75.26:1196,75,0	1/1:0,34:34:99:1577,99,0	1/1:0,12:12:27.09:431,27,0	1/1:0,30:30:81.28:1292,81,0	1/1:0,28:28:84.25:1279,84,0	1/1:0,32:31:84.29:1340,84,0	1/1:0,13:13:39.13:622,39,0
chr10	24322100	.	CCT	C	27714.58	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=8.112;DP=773;FS=0.522;HRun=0;HaplotypeScore=164.4198;InbreedingCoeff=0.9956;MQ=86.97;MQ0=0;MQRankSum=-12.209;QD=38.71;ReadPosRankSum=8.116;VQSLOD=5.1282;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,26:26:75.21:1079,75,0	1/1:0,22:22:63.21:927,63,0	0/0:35,0:35:99:0,99,1713	0/0:22,0:22:63.03:0,63,1054	1/1:1,41:42:99:1500,102,0	1/1:0,31:31:81.27:1192,81,0	1/1:0,17:17:42.14:618,42,0	1/1:0,28:28:84.24:1162,84,0	1/1:0,19:19:51.17:751,51,0	1/1:0,33:33:99:1409,99,0	1/1:1,32:33:87.29:1280,87,0	1/1:1,31:32:87.29:1281,87,0	1/1:0,26:26:72.24:1060,72,0	1/1:0,26:26:72.24:1060,72,0	1/1:2,31:33:81.27:1191,81,0	1/1:1,18:19:39.13:574,39,0	1/1:0,32:32:93.31:1369,93,0	1/1:0,8:8:17.87:264,18,0	1/1:2,27:29:84.19:1152,84,0	1/1:2,40:42:99:1590,108,0	1/1:3,30:33:84.28:1236,84,0	1/1:1,21:22:48.16:707,48,0	1/1:1,24:25:57.19:838,57,0	1/1:1,30:31:75.25:1104,75,0	1/1:1,26:27:75.25:1104,75,0	1/1:1,35:36:99:1546,105,0	1/1:2,30:32:81.27:1192,81,0	1/1:0,12:12:36.12:530,36,0
chr10	24322354	.	T	TAGAC	29829.41	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-7.493;DP=651;FS=8.455;HRun=0;HaplotypeScore=95.8644;InbreedingCoeff=0.9796;MQ=67.65;MQ0=0;MQRankSum=-7.552;QD=48.19;ReadPosRankSum=5.552;VQSLOD=5.2853;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,14:16:30.10:754,30,0	1/1:2,10:13:21.03:529,21,0	0/0:21,0:22:43.02:0,43,615	0/0:10,0:10:27.07:0,27,434	1/1:2,36:38:87.30:2189,87,0	1/1:4,17:22:45.15:1133,45,0	1/1:5,8:13:24.08:599,24,0	1/1:14,27:42:99:2173,99,0	1/1:8,16:24:36.12:905,36,0	1/1:7,25:33:81.28:1888,81,0	1/1:3,22:27:51.18:1284,51,0	1/1:4,12:16:33.11:825,33,0	1/1:6,17:24:48.16:1202,48,0	1/1:6,12:18:36.12:891,36,0	1/1:8,25:33:57.20:1434,57,0	1/1:7,14:21:36.12:906,36,0	1/1:3,15:18:30.10:755,30,0	1/1:2,15:17:45.15:1131,45,0	1/1:6,9:16:33.10:730,33,0	1/1:9,29:40:66.23:1660,66,0	1/1:1,17:19:35.94:906,36,0	1/1:7,22:29:48.16:1208,48,0	1/1:6,20:26:48.06:1208,48,0	1/1:0,13:14:33.11:830,33,0	1/1:6,14:23:39.13:960,39,0	1/1:3,26:31:90.22:2068,90,0	1/1:7,23:30:54.19:1359,54,0	1/1:5,5:16:12.04:302,12,0
chr10	24323878	.	A	AGTGTGTGTGTGTGT	37869.34	PASS	AC=48;AF=0.889;AN=54;BaseQRankSum=-6.512;DP=608;FS=3.988;HRun=0;HaplotypeScore=220.7283;InbreedingCoeff=0.7855;MQ=53.31;MQ0=2;MQRankSum=-7.671;QD=71.72;ReadPosRankSum=4.296;VQSLOD=4.6373;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	1/1:6,2:8:6.02:406,6,0	0/0:32,0:25:39.11:0,39,1217	0/0:19,0:17:39:0,39,1336	1/1:19,5:24:18.06:1207,18,0	1/1:20,8:28:33.11:2235,33,0	1/1:17,2:19:16.18:977,16,0	1/1:38,0:34:40.93:1906,41,0	1/1:15,6:21:30.10:1868,30,0	1/1:21,5:26:51.17:2792,51,0	1/1:15,4:20:18.06:1152,18,0	1/1:23,11:34:33.11:2235,33,0	1/1:16,5:21:24.08:1607,24,0	1/1:21,9:30:33.11:2230,33,0	1/1:24,14:38:50.27:3448,50,0	1/1:12,8:22:30.10:1972,30,0	1/1:13,1:16:6.02:262,6,0	1/1:15,1:16:29.13:1457,29,0	1/1:11,0:11:18.06:817,18,0	1/1:15,9:24:27.09:1780,27,0	0/0:14,0:17:0.47:0,0,1	1/1:16,3:19:21.07:1409,21,0	1/1:8,4:13:17.91:1114,18,0	1/1:13,4:17:12.04:786,12,0	1/1:14,4:18:9.03:610,9,0	1/1:16,6:23:39.10:1680,39,0	1/1:19,12:33:51.18:3308,51,0	1/1:1,5:6:9.03:610,9,0
chr10	24324438	.	CAGTT	C	29488.91	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=4.110;DP=605;FS=7.238;HRun=0;HaplotypeScore=127.8455;InbreedingCoeff=0.9964;MQ=71.90;MQ0=5;MQRankSum=-7.458;QD=52.56;ReadPosRankSum=4.228;VQSLOD=5.5520;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:48.16:0,48,1262	1/1:0,15:15:45.15:871,45,0	0/0:21,0:20:57.19:0,57,1295	0/0:7,0:7:18.53:0,19,484	1/1:1,32:32:87.22:1574,87,0	1/1:0,29:28:84.29:1599,84,0	1/1:0,11:11:33.11:639,33,0	1/1:3,32:35:93.31:1746,93,0	1/1:1,23:24:72.20:1356,72,0	1/1:5,17:22:57.20:1104,57,0	1/1:5,21:25:63.17:1161,63,0	1/1:0,20:20:60.21:1159,60,0	1/1:2,18:20:54.19:1045,54,0	1/1:1,21:22:57.20:1098,57,0	1/1:1,21:22:63.22:1220,63,0	1/1:3,23:26:72.24:1358,72,0	1/1:1,17:18:51.17:982,51,0	1/1:0,12:12:33.11:639,33,0	1/1:1,10:11:27.09:522,27,0	1/1:1,26:26:78.27:1480,78,0	1/1:1,21:22:57.11:1066,57,0	1/1:0,25:25:75.21:1407,75,0	1/1:2,18:20:60.15:1083,60,0	1/1:0,11:11:27.05:485,27,0	1/1:0,26:26:75.26:1449,75,0	1/1:1,28:29:87.30:1677,87,0	1/1:4,40:43:99:2148,111,0	1/1:0,11:11:33.11:617,33,0
chr10	24324516	.	CCTAA	C	25567.35	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-2.400;DP=634;FS=1.161;HRun=0;HaplotypeScore=156.7990;InbreedingCoeff=0.9956;MQ=80.76;MQ0=0;MQRankSum=-7.598;QD=44.70;ReadPosRankSum=4.582;VQSLOD=5.1834;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:57.20:0,57,1430	1/1:5,8:13:27.09:496,27,0	0/0:20,0:20:48.16:0,48,1217	0/0:22,0:22:45.15:0,45,1098	1/1:6,28:34:75.24:1349,75,0	1/1:6,21:27:63.22:1159,63,0	1/1:3,12:15:36.12:660,36,0	1/1:10,31:41:93.26:1628,93,0	1/1:3,22:25:66.23:1214,66,0	1/1:4,25:29:72.24:1296,72,0	1/1:3,27:30:81.28:1489,81,0	1/1:3,10:13:27.09:497,27,0	1/1:6,22:28:57.20:1048,57,0	1/1:8,19:27:60.21:1104,60,0	1/1:3,29:32:81.28:1490,81,0	1/1:1,26:27:72.25:1325,72,0	1/1:2,13:15:32.68:606,33,0	1/1:1,11:12:33.11:607,33,0	1/1:0,9:9:27.09:496,27,0	1/1:1,18:19:51.17:938,51,0	1/1:2,13:15:33.11:607,33,0	1/1:1,20:20:51.17:938,51,0	1/1:1,26:27:66.11:1214,66,0	1/1:1,13:14:33.11:607,33,0	1/1:4,18:22:54.19:993,54,0	1/1:3,26:29:78.27:1435,78,0	1/1:7,35:42:99:2042,111,0	1/1:0,6:6:18.06:331,18,0
chr10	24325155	.	T	TA	12675.73	PASS	AB=1.000;AC=53;AF=0.946;AN=56;BaseQRankSum=-4.009;DP=367;FS=3.209;HRun=3;HaplotypeScore=41.0360;InbreedingCoeff=0.5125;MQ=71.95;MQ0=0;MQRankSum=-3.706;QD=35.02;ReadPosRankSum=2.876;VQSLOD=5.1058;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,17:19:39.13:546,39,0	1/1:0,3:3:9.03:126,9,0	0/0:5,0:5:11.84:0,12,102	0/1:6,0:6:12.56:13,0,60	1/1:0,27:27:66.11:877,66,0	1/1:0,20:20:54.18:756,54,0	1/1:0,8:8:21.07:294,21,0	1/1:1,30:31:90.30:1259,90,0	1/1:0,9:9:24.08:336,24,0	1/1:3,18:21:57.13:733,57,0	1/1:0,18:18:54.14:729,54,0	1/1:1,9:10:24.08:336,24,0	1/1:1,16:17:48.16:671,48,0	1/1:1,11:12:27.09:378,27,0	1/1:1,13:14:33.11:462,33,0	1/1:1,15:16:42.14:588,42,0	1/1:0,13:13:36.12:504,36,0	1/1:1,5:6:15.05:210,15,0	1/1:1,8:9:27.06:358,27,0	1/1:1,15:16:42.14:580,42,0	1/1:0,4:4:12.04:168,12,0	1/1:1,1:2:3.01:42,3,0	1/1:1,10:11:21.07:294,21,0	1/1:0,6:6:12.04:168,12,0	1/1:2,19:21:45.15:629,45,0	1/1:1,16:17:48.15:656,48,0	1/1:0,20:20:54.18:755,54,0	1/1:0,6:6:15.05:210,15,0
chr10	24325368	.	CT	C	5227.56	PASS	AB=0.909;AC=51;AF=0.911;AN=56;BaseQRankSum=-5.312;DP=310;FS=27.583;HRun=10;HaplotypeScore=37.8029;InbreedingCoeff=0.6076;MQ=70.06;MQ0=8;MQRankSum=-2.340;QD=18.15;ReadPosRankSum=3.339;VQSLOD=3.4573;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:2,0:13:28.56:0,29,151	1/1:0,2:2:3:26,3,0	0/1:9,1:8:9.47:9,0,109	0/0:9,0:8:14.90:0,15,129	1/1:1,12:13:29.99:260,30,0	1/1:2,16:17:41.99:365,42,0	1/1:0,5:5:12:104,12,0	1/1:7,18:24:44.98:391,45,0	1/1:0,2:2:3:26,3,0	1/1:2,5:7:14.99:130,15,0	1/1:5,10:15:26.77:234,27,0	1/1:0,9:9:12:104,12,0	1/1:1,13:14:32.99:286,33,0	1/1:2,6:7:17.99:156,18,0	1/1:1,14:15:11.96:332,12,0	1/1:1,13:13:38.99:339,39,0	1/1:8,13:20:38.99:339,39,0	1/1:1,8:8:12.04:148,12,0	1/1:4,6:7:17.99:156,18,0	1/1:0,4:4:12:104,12,0	1/1:1,5:6:11.99:104,12,0	1/1:1,5:5:9:78,9,0	1/1:2,6:6:15:130,15,0	1/1:1,8:8:18:156,18,0	1/1:2,11:13:29.98:260,30,0	1/1:2,18:19:53.99:469,54,0	1/1:4,6:10:14.94:130,15,0	1/1:0,15:15:44.99:391,45,0
chr10	24325486	.	AC	A	982.50	PASS	AC=38;AF=0.864;AN=44;BaseQRankSum=0.667;DP=93;FS=1.926;HRun=4;HaplotypeScore=27.3654;InbreedingCoeff=0.3302;MQ=36.55;MQ0=12;MQRankSum=-0.972;QD=13.10;ReadPosRankSum=2.497;VQSLOD=1.4132;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:3,0:2:0:0,0,0	1/1:0,5:5:12.02:117,12,0	0/0:7,0:3:6.02:0,6,95	./.	1/1:1,6:7:5.99:51,6,0	./.	1/1:0,1:1:3.01:41,3,0	1/1:4,0:1:0.47:1,0,0	1/1:0,2:2:3:29,3,0	1/1:2,3:5:6.13:67,6,0	1/1:2,7:9:3:28,3,0	./.	1/1:0,2:2:6.02:72,6,0	1/1:1,1:1:1.82:5,2,0	1/1:1,5:5:14.97:149,15,0	1/1:2,3:4:9.91:106,10,0	0/0:2,0:1:3.01:0,3,48	./.	1/1:1,0:1:0.47:1,0,0	1/1:2,4:6:15.02:145,15,0	./.	1/1:0,3:3:3:27,3,0	1/1:2,2:3:3:27,3,0	./.	1/1:1,2:3:2.81:29,3,0	1/1:0,3:3:5.95:46,6,0	1/1:2,4:6:15.26:115,15,0	1/1:0,1:1:3:26,3,0
chr10	24326454	.	CA	C	217.47	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.505;DP=406;FS=12.001;HRun=2;HaplotypeScore=39.2557;InbreedingCoeff=0.9705;MQ=75.14;MQ0=0;MQRankSum=-3.950;QD=27.18;ReadPosRankSum=0.376;VQSLOD=1.7500;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,8:8:24.08:311,24,0	0/0:7,0:7:21.07:0,21,315	0/0:7,0:7:21.07:0,21,296	0/0:10,0:10:20.65:0,21,265	0/0:22,0:22:63.21:0,63,941	0/0:12,0:12:33.11:0,33,494	0/0:11,0:11:30.10:0,30,449	0/0:36,0:36:99:0,99,1445	0/0:10,0:10:30.09:0,30,431	0/0:29,0:29:87.28:0,87,1268	0/0:18,0:18:54.18:0,54,809	0/0:14,0:14:42.13:0,42,611	0/0:10,0:10:30.07:0,30,426	0/0:7,0:7:18.06:0,18,270	0/0:18,0:18:51.17:0,51,764	0/0:14,0:14:42.14:0,42,629	0/0:20,0:20:60.18:0,60,871	0/0:8,0:8:24.08:0,24,360	0/0:11,0:11:30.08:0,30,427	0/0:30,0:30:90.28:0,90,1308	0/0:11,0:11:27.09:0,27,405	0/0:12,0:12:33.11:0,33,494	0/0:14,0:14:42.12:0,42,590	0/0:9,0:9:27.05:0,27,379	0/0:15,0:15:42.14:0,42,629	0/0:19,0:19:57.19:0,57,848	0/0:15,0:15:45.15:0,45,674	0/0:9,0:9:27.09:0,27,405
chr10	24326502	.	A	AACTG	387.67	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.128;DP=389;FS=1.603;HRun=0;HaplotypeScore=60.4789;InbreedingCoeff=0.7961;MQ=65.22;MQ0=0;MQRankSum=-4.100;QD=55.38;ReadPosRankSum=0.330;VQSLOD=4.4126;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,7:7:18.06:478,18,0	0/0:8,0:8:18.06:0,18,336	0/0:2,0:2:3.01:0,3,56	0/0:7,0:7:15.03:0,15,233	0/0:23,0:23:63.22:0,63,1169	0/0:16,0:16:45.15:0,45,839	0/0:8,0:7:21.06:0,21,361	0/0:36,0:36:96.32:0,96,1721	0/0:10,0:10:27.09:0,27,504	0/0:22,0:22:63.22:0,63,1176	0/0:17,0:17:48.16:0,48,896	0/0:10,0:10:27.09:0,27,501	0/0:10,0:10:30.10:0,30,553	0/0:8,0:8:15.05:0,15,280	0/0:15,0:15:39.11:0,39,662	0/0:6,0:6:18.06:0,18,336	0/0:25,0:25:72.18:0,72,1262	0/0:12,0:12:30.10:0,30,560	0/0:15,0:15:39.13:0,39,728	0/0:32,0:32:96.26:0,96,1688	0/0:10,0:10:30.10:0,30,560	0/0:6,0:6:18.06:0,18,321	0/0:12,0:12:36.12:0,36,672	0/0:11,0:11:33.11:0,33,615	0/0:10,0:10:27.09:0,27,499	0/0:21,0:21:63.19:0,63,1140	0/0:22,0:22:66.23:0,66,1230	0/0:8,0:8:24.08:0,24,448
chr10	24326516	.	CT	C	132.32	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.180;DP=357;FS=0.000;HRun=3;HaplotypeScore=36.8030;InbreedingCoeff=0.7631;MQ=64.28;MQ0=0;MQRankSum=-4.116;QD=18.90;ReadPosRankSum=-0.280;VQSLOD=2.6688;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,7:7:18.06:223,18,0	0/0:6,0:6:18.05:0,18,242	0/0:3,0:3:3:0,3,25	0/0:5,0:5:15.04:0,15,188	0/0:21,0:21:63.21:0,63,905	0/0:16,0:16:45.15:0,45,647	0/0:10,0:9:27.09:0,27,388	0/0:31,0:30:87.29:0,87,1237	0/0:9,0:9:27.09:0,27,389	0/0:20,0:20:60.19:0,60,846	0/0:12,0:12:36.11:0,36,499	0/0:9,0:9:24.08:0,24,345	0/0:9,0:9:27.09:0,27,388	0/0:5,0:5:15.05:0,15,216	0/0:12,0:12:33.11:0,33,467	0/0:8,0:8:21.07:0,21,302	0/0:23,0:23:66.22:0,66,948	0/0:12,0:12:33.11:0,33,475	0/0:14,0:14:39.09:0,39,529	0/0:30,0:30:84.27:0,84,1190	0/0:7,0:7:18.06:0,18,259	0/0:3,0:3:9.03:0,9,130	0/0:9,0:9:27.08:0,27,372	0/0:13,0:13:39.11:0,39,541	0/0:9,0:9:24.08:0,24,346	0/0:21,0:21:60.20:0,60,863	0/0:22,0:22:63.21:0,63,907	0/0:11,0:11:33.11:0,33,475
chr10	24326581	.	CT	C	312.45	PASS	AB=0.891;AC=13;AF=0.232;AN=56;BaseQRankSum=-1.007;DP=381;FS=3.106;HRun=14;HaplotypeScore=74.5781;InbreedingCoeff=-0.0028;MQ=64.74;MQ0=5;MQRankSum=1.157;QD=1.99;ReadPosRankSum=1.095;VQSLOD=-0.7000;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:10:22.36:0,22,98	0/0:10,0:10:20.98:0,21,186	0/0:15,1:9:9.06:0,9,82	0/0:19,0:11:4.59:0,5,32	0/1:19,2:21:58.20:58,0,161	0/1:10,1:9:14.72:41,0,15	0/0:9,0:8:8.32:0,8,50	1/1:10,11:22:31.57:210,32,0	0/1:8,1:9:5.19:5,0,80	0/1:16,2:19:20.57:21,0,132	0/1:15,2:17:54.74:55,0,112	0/0:9,0:9:9.85:0,10,137	0/0:8,0:8:9.11:0,9,140	0/0:6,0:6:6.01:0,6,56	0/0:15,1:15:18.37:0,18,276	0/0:11,2:13:1.13:0,1,162	0/1:25,1:27:9.51:10,0,282	0/0:15,1:16:8.24:0,8,171	0/0:10,0:11:13.67:0,14,102	0/0:20,0:20:13.89:0,14,200	1/1:0,1:1:2.98:21,3,0	0/1:6,2:8:29.15:29,0,44	0/1:9,2:11:5.61:6,0,88	0/0:7,1:7:15.81:0,16,115	0/1:10,1:11:5.61:6,0,88	0/0:25,0:26:8.60:0,9,245	0/0:14,2:16:6.36:0,6,180	0/0:11,0:11:21.02:0,21,195
chr10	24326582	.	T	TTTTTA	425.44	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=2.020;DP=396;FS=7.053;HRun=0;HaplotypeScore=118.1622;InbreedingCoeff=0.5547;MQ=63.50;MQ0=7;MQRankSum=-4.038;QD=12.89;ReadPosRankSum=-1.409;VQSLOD=1.7577;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,6:12:26.88:519,27,0	0/0:10,0:10:21.02:0,21,364	0/0:16,0:9:23.76:0,24,266	0/0:19,0:11:14.29:0,14,156	0/0:22,0:22:49.37:0,49,777	0/0:11,0:9:15.04:0,15,229	0/0:11,0:10:10.83:0,11,82	0/0:25,0:25:51.11:0,51,667	0/0:9,0:9:18.43:0,18,237	0/1:20,0:20:2.39:2,0,501	0/0:18,0:18:36.09:0,36,573	0/0:11,0:11:26.97:0,27,390	0/0:8,0:8:21.06:0,21,367	0/0:6,0:6:9.02:0,9,151	0/0:15,0:14:38.92:0,39,578	0/0:14,0:14:27.04:0,27,497	0/0:27,0:27:60.07:0,60,920	0/0:15,0:15:31.87:0,32,401	0/0:11,0:11:13.59:0,14,204	0/0:21,0:21:36.04:0,36,577	0/0:1,0:1:3.01:0,3,48	0/0:8,0:8:12.04:0,12,218	0/0:11,0:11:18:0,18,279	0/0:8,0:7:14.96:0,15,264	0/0:11,0:11:18:0,18,280	0/0:28,0:28:52.40:0,52,824	0/0:18,0:18:36.03:0,36,557	0/0:9,0:8:21.07:0,21,433
chr10	24326601	.	T	TTTC	160.88	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=1.726;DP=361;FS=4.602;HRun=0;HaplotypeScore=69.6037;InbreedingCoeff=0.7291;MQ=54.35;MQ0=11;MQRankSum=-2.157;QD=12.38;ReadPosRankSum=1.352;VQSLOD=3.0655;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:7,6:12:26:254,26,0	0/0:8,0:8:17.94:0,18,182	0/0:5,0:3:8.62:0,9,52	0/0:14,0:7:0.09:0,0,2	0/0:20,0:20:52.25:0,52,389	0/0:10,0:8:19.74:0,20,146	0/0:8,0:7:10.99:0,11,124	0/0:20,0:20:47.68:0,48,438	0/0:7,0:7:13.90:0,14,89	0/0:18,0:18:50.93:0,51,481	0/0:15,0:15:35.93:0,36,341	0/0:11,0:11:31.80:0,32,342	0/0:8,0:7:20.98:0,21,197	0/0:8,0:8:17.95:0,18,158	0/0:15,0:14:34.78:0,35,344	0/0:14,0:14:38.06:0,38,393	0/0:25,0:24:59.64:0,60,488	0/0:13,0:12:28.36:0,28,236	0/0:11,0:11:29.82:0,30,276	0/0:18,0:18:37.43:0,37,308	0/0:3,0:3:7.79:0,8,74	0/0:10,0:10:26.90:0,27,258	0/0:12,0:12:17.34:0,17,162	0/0:12,0:11:17.54:0,18,148	0/0:12,0:12:29.85:0,30,264	0/0:26,0:22:60.05:0,60,613	0/0:16,0:16:38.58:0,39,317	0/0:9,0:8:22.25:0,22,207
chr10	24326923	.	AT	A	15580.88	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=3.176;DP=581;FS=0.000;HRun=6;HaplotypeScore=57.0456;InbreedingCoeff=0.9914;MQ=68.93;MQ0=0;MQRankSum=-2.154;QD=28.85;ReadPosRankSum=3.835;VQSLOD=5.3198;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:63.15:0,63,808	1/1:0,8:8:21.05:225,21,0	0/0:12,0:12:27.54:0,28,321	0/0:6,0:6:14.70:0,15,147	1/1:2,37:39:99:1159,108,0	1/1:1,23:24:63.16:677,63,0	1/1:0,16:16:45.11:481,45,0	1/1:2,27:29:81.19:862,81,0	1/1:0,15:15:42.11:451,42,0	1/1:3,22:25:66.17:709,66,0	1/1:0,24:24:69.17:742,69,0	1/1:1,12:13:36.09:387,36,0	1/1:0,25:25:63.16:677,63,0	1/1:0,27:27:72.18:774,72,0	1/1:0,20:20:60.15:645,60,0	1/1:0,28:28:78.20:838,78,0	1/1:0,16:16:39.10:419,39,0	1/1:0,12:12:33.08:354,33,0	1/1:2,18:20:54.12:573,54,0	1/1:2,26:28:69.17:738,69,0	1/1:0,14:14:33.08:355,33,0	1/1:0,15:15:45.11:483,45,0	1/1:0,30:30:81.20:870,81,0	1/1:1,15:16:36.09:387,36,0	1/1:3,10:13:27.07:290,27,0	1/1:2,29:31:87.22:935,87,0	1/1:1,29:30:78.20:838,78,0	1/1:0,22:22:66.17:709,66,0
chr10	24327550	.	C	CAT	23262.23	PASS	AB=1.000;AC=53;AF=0.946;AN=56;BaseQRankSum=-4.886;DP=578;FS=1.432;HRun=0;HaplotypeScore=55.1606;InbreedingCoeff=0.7535;MQ=72.86;MQ0=8;MQRankSum=-4.197;QD=41.17;ReadPosRankSum=3.678;VQSLOD=6.5939;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,8:6:18.06:308,18,0	1/1:1,10:11:30.10:514,30,0	0/0:13,0:13:20.84:0,21,258	0/1:9,0:9:1.41:20,0,1	1/1:3,24:28:66.23:1132,66,0	1/1:1,22:24:63.22:1080,63,0	1/1:0,11:11:33.11:566,33,0	1/1:1,30:31:90.31:1532,90,0	1/1:3,11:13:24.08:412,24,0	1/1:3,27:30:84.28:1401,84,0	1/1:2,30:33:87.30:1492,87,0	1/1:2,16:17:39.13:669,39,0	1/1:1,24:26:72.25:1231,72,0	1/1:3,17:21:45.15:770,45,0	1/1:5,19:24:48.16:823,48,0	1/1:0,23:24:66.23:1132,66,0	1/1:4,13:17:33.11:565,33,0	1/1:2,17:21:48.14:768,48,0	1/1:2,16:16:45.15:772,45,0	1/1:1,25:26:75.26:1286,75,0	1/1:0,9:10:27.09:463,27,0	1/1:1,13:14:39.13:669,39,0	1/1:4,21:25:57.20:977,57,0	1/1:3,8:11:24.08:412,24,0	1/1:4,14:18:33.11:566,33,0	1/1:2,31:32:93.32:1592,93,0	1/1:8,32:40:84.29:1441,84,0	1/1:1,17:18:39.13:669,39,0
chr10	24328402	.	G	GTT	14832.20	PASS	AB=0.577;AC=51;AF=0.911;AN=56;BaseQRankSum=1.138;DP=580;FS=11.106;HRun=9;HaplotypeScore=120.0177;InbreedingCoeff=0.8283;MQ=77.17;MQ0=0;MQRankSum=-6.768;QD=27.22;ReadPosRankSum=4.295;VQSLOD=3.4910;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:24:34.93:120,35,0	1/1:0,6:8:17.54:222,18,0	0/0:12,0:10:11.88:0,12,111	0/0:21,0:22:41.69:0,42,428	1/1:5,27:33:80.43:1174,80,0	1/1:3,24:27:69.23:1062,69,0	1/1:6,14:21:50.08:682,50,0	1/1:10,0:31:24.18:157,24,0	1/1:1,0:21:49.91:171,50,0	1/1:2,17:19:51.16:757,51,0	1/1:7,29:40:95.30:1301,95,0	1/1:3,19:22:54.18:815,54,0	1/1:3,17:22:47.44:701,47,0	1/1:0,20:21:54.18:831,54,0	1/1:1,17:18:48.16:739,48,0	1/1:0,12:15:44.12:600,44,0	1/1:0,0:17:32.04:109,32,0	1/1:2,0:11:20.08:68,20,0	0/1:4,0:15:1.47:64,0,1	1/1:5,0:28:27.43:171,27,0	1/1:1,0:9:14.97:51,15,0	1/1:2,18:21:44.59:628,45,0	1/1:4,23:28:56.57:839,57,0	1/1:2,12:14:33.11:508,33,0	1/1:2,21:23:54.18:831,54,0	1/1:1,20:23:62.68:892,63,0	1/1:5,23:28:69.23:1062,69,0	1/1:0,6:6:18.06:277,18,0
chr10	24332917	.	GATAT	G	5838.99	PASS	AB=0.567;AC=40;AF=0.741;AN=54;BaseQRankSum=-7.275;DP=263;FS=0.755;HRun=0;HaplotypeScore=60.9567;InbreedingCoeff=0.3675;MQ=67.30;MQ0=1;MQRankSum=0.476;QD=25.61;ReadPosRankSum=-0.788;VQSLOD=4.3209;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,3:5:6.02:102,6,0	1/1:1,5:6:9.02:130,9,0	0/0:4,0:4:2.97:0,3,20	0/0:4,0:3:2.84:0,3,14	1/1:3,19:23:48.16:791,48,0	1/1:1,17:18:39.13:661,39,0	1/1:0,6:6:9.03:153,9,0	1/1:12,23:35:63.08:854,63,0	0/1:1,1:9:30.85:31,0,68	1/1:2,11:13:33.11:552,33,0	1/1:5,4:10:15.04:232,15,0	1/1:1,5:6:6.02:102,6,0	1/1:0,6:6:15.05:254,15,0	1/1:3,7:10:9.03:153,9,0	1/1:0,4:4:12.04:204,12,0	1/1:0,2:2:6.02:102,6,0	0/0:7,0:17:19.68:0,20,93	0/1:3,1:7:36.57:37,0,84	0/1:3,1:12:30.51:31,0,62	0/0:3,0:7:8.39:0,8,38	0/0:1,0:2:2.80:0,3,13	./.	1/1:2,1:3:3.01:51,3,0	1/1:0,2:2:6.02:102,6,0	1/1:1,13:14:27.09:458,27,0	1/1:2,13:16:32.30:647,32,0	1/1:4,7:11:6:102,6,0	0/1:1,7:9:3.72:93,0,4
chr10	24333436	.	AT	A	7690.26	PASS	AB=1.000;AC=51;AF=0.911;AN=56;BaseQRankSum=1.962;DP=327;FS=11.460;HRun=8;HaplotypeScore=32.5091;InbreedingCoeff=0.6657;MQ=66.73;MQ0=0;MQRankSum=-2.405;QD=24.26;ReadPosRankSum=0.302;VQSLOD=4.1279;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:8:24.07:0,24,290	1/1:1,8:9:24.04:232,24,0	0/1:5,0:5:3.39:3,0,89	0/0:2,0:2:2.94:0,3,18	1/1:3,26:29:72.10:695,72,0	1/1:3,7:10:21.03:203,21,0	1/1:2,6:8:18.02:174,18,0	1/1:3,20:23:60.09:579,60,0	1/1:0,6:6:18.03:174,18,0	1/1:0,20:20:60.10:580,60,0	1/1:2,16:18:48.07:464,48,0	1/1:1,8:9:21.03:203,21,0	1/1:1,8:9:24.03:232,24,0	1/1:2,7:9:21.03:203,21,0	1/1:1,8:9:24.04:232,24,0	1/1:1,13:14:39.06:377,39,0	1/1:0,18:18:51.03:483,51,0	1/1:2,9:11:23.99:222,24,0	1/1:2,11:13:30.04:290,30,0	1/1:2,9:11:27.04:261,27,0	1/1:1,5:6:12.02:116,12,0	1/1:0,1:1:3:29,3,0	1/1:0,11:11:30.05:290,30,0	1/1:0,3:3:6.01:58,6,0	1/1:2,12:14:30.05:290,30,0	1/1:4,16:20:48.07:464,48,0	1/1:1,14:15:39.06:377,39,0	1/1:0,16:16:48.08:464,48,0
chr10	24335460	.	G	GA	982.46	PASS	AB=0.725;AC=13;AF=0.361;AN=36;BaseQRankSum=3.058;DP=235;DS;FS=61.334;HRun=1;HaplotypeScore=24.4602;InbreedingCoeff=0.4131;MQ=27.25;MQ0=50;MQRankSum=-0.361;QD=12.13;ReadPosRankSum=1.950;VQSLOD=-0.5272;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:4:6.02:0,6,78	0/0:3,0:1:3.01:0,3,39	0/0:35,0:10:27.09:0,27,350	0/0:31,0:10:27.08:0,27,340	0/1:11,6:13:99:186,0,128	./.	./.	0/0:21,0:4:9.03:0,9,113	./.	1/1:3,3:6:12.04:173,12,0	1/1:3,9:10:9.03:134,9,0	./.	./.	./.	./.	./.	0/0:13,0:8:12.04:0,12,156	./.	./.	0/1:15,5:14:99:119,0,275	0/0:2,0:2:6.02:0,6,78	0/1:3,4:6:29.79:81,0,30	1/1:2,10:10:18.06:258,18,0	0/0:5,0:2:3.01:0,3,39	1/1:2,2:2:9.03:125,9,0	0/0:11,0:8:24.08:0,24,311	0/0:5,1:3:9.03:0,9,117	1/1:2,1:1:3.01:45,3,0
chr10	24335564	.	A	AT	219.06	PASS	AC=8;AF=0.500;AN=16;BaseQRankSum=-1.543;DP=112;FS=21.065;HRun=1;HaplotypeScore=13.1694;MQ=28.80;MQ0=50;MQRankSum=-2.270;QD=13.69;ReadPosRankSum=2.270;VQSLOD=0.6420;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:2:5.97:0,6,58	./.	0/0:28,0:9:26.57:0,27,314	0/0:19,0:7:18.06:0,18,225	./.	./.	./.	./.	0/0:1,0:1:2.94:0,3,18	./.	1/1:1,2:2:3.01:45,3,0	./.	./.	./.	./.	./.	./.	./.	./.	1/1:4,4:4:9.03:134,9,0	./.	./.	1/1:2,1:1:3.01:45,3,0	./.	1/1:0,2:2:6.02:90,6,0	./.	./.	./.
chr10	24340813	.	GCACA	G	3616.24	PASS	AB=0.772;AC=42;AF=0.840;AN=50;BaseQRankSum=2.272;DP=451;FS=16.216;HRun=0;HaplotypeScore=109.6749;InbreedingCoeff=0.3405;MQ=53.09;MQ0=18;MQRankSum=0.207;QD=9.99;ReadPosRankSum=2.770;VQSLOD=2.0081;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:33:35.85:0,36,704	1/1:5,2:8:11.86:137,12,0	./.	./.	1/1:10,3:14:9.03:142,9,0	1/1:12,1:12:7.84:99,8,0	1/1:12,12:25:27.08:406,27,0	0/0:20,0:18:23.80:0,24,373	./.	1/1:11,5:15:9.15:184,9,0	1/1:12,0:13:5.81:67,6,0	0/1:14,7:20:24.14:85,0,24	1/1:7,12:19:14.70:235,15,0	1/1:11,7:17:17.89:264,18,0	1/1:10,2:12:9.02:122,9,0	1/1:8,4:12:15.05:236,15,0	1/1:5,0:16:14.51:121,15,0	1/1:5,0:9:6.01:56,6,0	0/1:7,0:8:23.03:36,0,23	0/1:14,0:17:0.01:0,0,0	1/1:31,0:27:5.55:70,6,0	1/1:6,5:12:8.66:114,9,0	1/1:6,7:15:9.03:142,9,0	1/1:21,5:25:9.12:448,9,0	1/1:10,4:16:5.13:204,5,0	1/1:8,5:13:15.05:235,15,0	0/1:4,0:12:21.72:72,0,22	1/1:1,0:7:15.02:140,15,0
chr10	24340953	.	C	CT	11466.99	PASS	AB=0.788;AC=51;AF=0.911;AN=56;BaseQRankSum=-4.585;DP=497;FS=5.768;HRun=9;HaplotypeScore=63.3029;InbreedingCoeff=0.3510;MQ=65.02;MQ0=3;MQRankSum=-2.250;QD=24.35;ReadPosRankSum=2.555;VQSLOD=5.8402;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,15:19:45.12:498,45,0	1/1:4,8:12:33.09:362,33,0	0/1:23,0:11:7.58:8,0,23	0/0:26,0:11:8.74:0,9,80	1/1:8,18:27:42.93:665,43,0	1/1:6,13:19:48.13:524,48,0	1/1:1,19:20:54.14:595,54,0	1/1:5,20:25:57.61:621,58,0	1/1:0,9:9:24.06:265,24,0	1/1:6,12:18:51.13:559,51,0	1/1:3,13:16:45.12:495,45,0	1/1:8,14:22:51.13:561,51,0	1/1:5,10:15:27.07:298,27,0	1/1:3,19:21:51.14:562,51,0	1/1:8,6:14:33.07:355,33,0	1/1:8,7:15:36:372,36,0	1/1:7,13:20:45.09:484,45,0	0/1:7,6:13:22.06:214,0,22	0/1:10,8:19:21.93:235,0,22	1/1:4,18:22:53.84:562,54,0	1/1:4,7:12:20.25:188,20,0	1/1:3,10:13:39.09:422,39,0	1/1:5,14:19:54.13:588,54,0	1/1:3,9:11:27.06:289,27,0	1/1:6,11:17:40.35:430,40,0	1/1:3,17:20:51.14:564,51,0	1/1:2,13:14:39.11:431,39,0	1/1:5,7:12:29.82:320,30,0
chr10	24340998	.	C	CA	7097.88	PASS	AB=0.706;AC=45;AF=0.804;AN=56;BaseQRankSum=-2.821;DP=488;FS=1.991;HRun=12;HaplotypeScore=82.3396;InbreedingCoeff=0.1268;MQ=68.00;MQ0=3;MQRankSum=-1.727;QD=15.63;ReadPosRankSum=-0.377;VQSLOD=5.5470;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:16,2:18:13.66:14,0,237	1/1:3,8:12:26.85:236,27,0	0/0:13,0:9:2.32:0,2,8	0/0:21,0:13:4.64:0,5,41	1/1:9,17:29:9.10:412,9,0	1/1:5,10:15:11.16:270,11,0	0/1:9,5:16:53.75:163,0,54	1/1:9,10:20:38.88:356,39,0	1/1:6,5:11:15.02:146,15,0	1/1:5,17:22:32.12:457,32,0	1/1:7,17:25:34.95:470,35,0	0/1:3,13:16:10.97:214,0,11	1/1:10,6:16:7.98:225,8,0	1/1:10,5:16:29.48:258,29,0	1/1:1,11:12:27.04:263,27,0	1/1:2,14:17:23:371,23,0	1/1:4,14:20:25.83:380,26,0	1/1:2,7:9:21.02:198,21,0	1/1:6,14:21:28.80:411,29,0	0/1:9,4:15:23.83:122,0,24	1/1:1,6:7:18.02:171,18,0	1/1:7,8:16:14.09:276,14,0	0/1:8,16:25:18.42:356,0,18	0/1:6,5:10:0.89:149,0,1	1/1:5,15:20:11.15:270,11,0	0/1:16,8:28:0.08:310,0,0	1/1:7,16:24:17.92:383,18,0	1/1:4,7:12:23.87:219,24,0
chr10	24341200	.	AT	A	9624.29	PASS	AB=0.536;AC=51;AF=0.911;AN=56;BaseQRankSum=-5.732;DP=516;FS=0.000;HRun=10;HaplotypeScore=53.4603;InbreedingCoeff=0.8500;MQ=76.48;MQ0=1;MQRankSum=-7.059;QD=20.52;ReadPosRankSum=5.749;VQSLOD=5.0639;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,29:29:71.99:625,72,0	1/1:0,7:7:18:156,18,0	0/0:30,0:20:11.05:0,11,277	0/0:17,0:13:29.59:0,30,265	1/1:1,23:24:65.99:572,66,0	1/1:5,11:16:23.99:208,24,0	1/1:0,11:11:32.99:286,33,0	1/1:1,23:24:65.97:569,66,0	1/1:1,17:18:35.99:313,36,0	1/1:0,18:18:53.99:469,54,0	1/1:2,14:16:41.95:358,42,0	1/1:0,21:21:41.99:365,42,0	1/1:4,13:17:26.88:234,27,0	1/1:1,18:19:44.99:391,45,0	1/1:3,15:18:44.98:391,45,0	1/1:2,16:18:35.99:313,36,0	1/1:2,23:25:59.46:498,59,0	1/1:1,9:10:26.98:234,27,0	1/1:3,13:16:35.94:312,36,0	1/1:2,16:18:41.98:365,42,0	1/1:2,15:17:38.99:339,39,0	1/1:0,16:16:41.99:364,42,0	0/1:2,13:15:0.26:219,0,0	1/1:0,21:21:50.99:443,51,0	1/1:3,13:16:32.99:286,33,0	1/1:0,21:21:59.96:517,60,0	1/1:4,23:27:65.89:564,66,0	1/1:0,11:11:26.99:234,27,0
chr10	24342157	.	A	AT	9412.08	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-14.997;DP=629;FS=4.660;HRun=8;HaplotypeScore=57.2080;InbreedingCoeff=0.9982;MQ=77.54;MQ0=0;MQRankSum=-1.437;QD=28.18;ReadPosRankSum=1.021;VQSLOD=5.5037;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:93.04:0,93,851	1/1:2,10:12:27.08:312,27,0	0/0:21,0:21:35.20:0,35,340	0/0:8,0:10:22.07:0,22,175	1/1:6,27:33:78.09:845,78,0	1/1:3,19:22:57.17:658,57,0	1/1:0,17:17:51.15:589,51,0	0/0:36,1:36:49.39:0,49,700	0/0:23,0:23:66.01:0,66,595	0/0:21,0:21:57.03:0,57,521	0/0:22,0:22:66.03:0,66,600	1/1:3,23:26:41.80:733,42,0	1/1:4,20:24:54.16:623,54,0	1/1:6,20:26:60.13:674,60,0	1/1:4,22:26:63.19:727,63,0	1/1:1,22:23:57.17:658,57,0	0/0:28,0:28:84.03:0,84,764	0/0:13,0:13:33.01:0,33,302	0/0:27,0:27:72.02:0,72,656	0/0:20,0:20:44.99:0,45,403	0/0:18,0:18:42.02:0,42,384	1/1:4,21:25:57.13:643,57,0	1/1:2,18:20:29.72:596,30,0	1/1:1,20:21:63.19:725,63,0	0/0:23,0:22:60.03:0,60,549	1/1:3,20:23:66.17:739,66,0	1/1:3,23:26:60.17:682,60,0	1/1:4,6:10:18.05:208,18,0
chr10	24342444	.	T	TA	13148.53	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-3.086;DP=542;FS=11.231;HRun=9;HaplotypeScore=69.1221;InbreedingCoeff=0.9003;MQ=70.97;MQ0=0;MQRankSum=-3.836;QD=25.29;ReadPosRankSum=3.847;VQSLOD=4.9021;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,19:21:28.09:538,28,0	1/1:0,9:9:24.06:266,24,0	0/0:8,0:8:12.14:0,12,110	0/0:14,0:14:26.93:0,27,223	1/1:7,25:32:71.22:783,71,0	1/1:3,17:20:45.12:498,45,0	1/1:1,16:17:39.11:431,39,0	1/1:4,26:29:75.16:809,75,0	1/1:1,9:10:27.07:299,27,0	1/1:6,22:28:43.14:695,43,0	1/1:4,18:22:48.13:531,48,0	1/1:2,13:15:36.10:398,36,0	1/1:1,23:24:60.16:664,60,0	1/1:3,18:21:42.11:465,42,0	1/1:1,17:18:45.12:498,45,0	1/1:4,15:19:45.12:498,45,0	1/1:8,14:22:18.72:348,19,0	1/1:4,11:15:10.04:339,10,0	1/1:5,11:16:11.08:340,11,0	1/1:6,25:31:72.19:797,72,0	1/1:2,4:6:12.03:133,12,0	1/1:4,17:21:39.11:431,39,0	1/1:1,20:21:54.15:597,54,0	1/1:1,9:10:27.07:299,27,0	1/1:0,21:21:57.15:631,57,0	1/1:3,26:29:78.21:863,78,0	1/1:7,23:30:40.11:661,40,0	1/1:1,11:12:10.08:339,10,0
chr10	24344278	.	C	CA	21499.19	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-8.218;DP=570;FS=10.300;HRun=1;HaplotypeScore=52.3662;InbreedingCoeff=0.9888;MQ=94.28;MQ0=0;MQRankSum=-11.435;QD=41.42;ReadPosRankSum=6.862;VQSLOD=3.8738;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,14:14:36.12:540,36,0	1/1:1,9:10:27.09:405,27,0	0/0:22,0:22:63.20:0,63,804	0/0:29,0:29:81.26:0,81,1036	1/1:1,38:39:99:1563,108,0	1/1:0,26:26:75.25:1124,75,0	1/1:2,15:17:48.12:695,48,0	1/1:1,25:26:75.22:1063,75,0	1/1:0,11:11:33.11:495,33,0	1/1:2,17:19:54.18:802,54,0	1/1:0,23:23:66.22:989,66,0	1/1:2,12:14:33.11:495,33,0	1/1:1,29:30:84.28:1259,84,0	1/1:1,23:24:66.22:989,66,0	1/1:0,20:20:60.20:900,60,0	1/1:0,12:12:36.12:540,36,0	1/1:0,6:6:15.05:225,15,0	1/1:2,12:14:33.11:494,33,0	1/1:1,12:13:39.13:582,39,0	1/1:2,35:37:99:1549,105,0	1/1:0,20:20:51.17:764,51,0	1/1:0,19:19:54.18:810,54,0	1/1:1,14:15:42.14:630,42,0	1/1:0,21:21:63.21:944,63,0	1/1:0,25:25:75.25:1124,75,0	1/1:0,28:28:84.27:1240,84,0	1/1:4,25:29:66.18:964,66,0	1/1:0,7:7:21.07:315,21,0
chr10	24344932	.	A	AAT	476.95	PASS	AB=0.977;AC=16;AF=0.296;AN=54;BaseQRankSum=-4.361;DP=206;FS=7.257;HRun=0;HaplotypeScore=40.5675;InbreedingCoeff=0.2990;MQ=81.74;MQ0=1;MQRankSum=-0.755;QD=7.95;ReadPosRankSum=0.449;VQSLOD=1.7010;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:7:11.53:0,12,67	0/0:2,0:2:2.98:0,3,21	0/0:10,0:6:3.01:0,3,39	0/0:16,0:9:3.63:0,4,74	0/0:2,0:2:3.45:0,3,22	0/0:20,0:20:42.13:0,42,292	0/0:4,0:4:6.42:0,6,43	0/0:38,0:38:77.60:0,78,318	1/1:1,3:4:9.03:145,9,0	0/0:3,0:3:2.94:0,3,18	0/1:7,0:7:13.61:14,0,50	0/0:4,0:4:5.95:0,6,42	0/0:12,0:12:2.52:0,3,130	0/1:6,0:6:15.99:16,0,33	1/1:2,0:2:0.47:1,0,0	0/0:4,0:4:5.95:0,6,42	1/1:1,1:6:9.01:101,9,0	1/1:0,3:3:9.03:145,9,0	1/1:4,3:7:9.03:129,9,0	1/1:3,3:6:3.01:48,3,0	./.	0/0:3,0:3:2.98:0,3,21	0/0:1,0:1:2.98:0,3,21	0/0:2,0:2:2.98:0,3,21	0/0:9,0:9:20.49:0,20,135	0/0:9,0:9:14.15:0,14,94	0/1:9,0:9:1.67:2,0,122	0/1:9,1:10:24.80:25,0,126
chr10	24344939	.	ATG	A	1919.92	PASS	AB=0.986;AC=26;AF=0.481;AN=54;BaseQRankSum=-8.633;DP=182;FS=2.195;HRun=0;HaplotypeScore=32.5919;InbreedingCoeff=-0.2300;MQ=77.45;MQ0=1;MQRankSum=0.896;QD=14.54;ReadPosRankSum=-6.419;VQSLOD=1.6387;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:6,0:6:12.44:114,12,0	0/1:2,0:2:17.95:19,0,18	0/0:8,0:3:2.93:0,3,25	0/0:17,0:9:8.83:0,9,57	0/1:3,0:3:14.98:39,0,15	0/0:15,0:15:20.92:0,21,309	0/0:3,0:3:5.93:0,6,45	1/1:1,34:35:99:1426,99,0	1/1:5,0:5:3.55:45,4,0	0/1:2,0:2:15:22,0,15	0/1:6,0:6:13.60:14,0,59	0/1:3,0:3:15.99:16,0,36	0/1:8,1:9:42.90:43,0,131	0/1:3,0:3:15.98:16,0,36	1/1:2,0:2:3:25,3,0	0/1:4,0:4:15.98:16,0,36	1/1:7,0:7:3.23:41,3,0	0/0:3,0:3:5.48:0,5,17	1/1:4,0:4:2.98:23,3,0	0/0:3,0:3:0.86:0,1,2	./.	0/1:2,0:2:17.98:19,0,18	0/1:2,0:2:17.97:18,0,19	0/0:1,0:1:2.99:0,3,24	0/1:9,0:9:43.87:44,0,135	0/1:8,0:8:56.87:57,0,86	0/1:10,0:10:17.56:18,0,140	0/1:9,1:10:61.81:62,0,131
chr10	24349654	.	GT	G	4686.21	PASS	AC=52;AF=0.963;AN=54;BaseQRankSum=-2.973;DP=216;FS=16.147;HRun=10;HaplotypeScore=25.5093;InbreedingCoeff=0.5349;MQ=67.58;MQ0=0;MQRankSum=-2.973;QD=22.32;ReadPosRankSum=2.842;VQSLOD=3.5547;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,8:8:24:208,24,0	1/1:0,3:3:9:78,9,0	./.	0/0:6,0:4:8.84:0,9,55	1/1:1,9:10:26.99:234,27,0	1/1:3,16:19:44.98:391,45,0	1/1:0,6:6:18:156,18,0	1/1:7,22:29:59.94:517,60,0	1/1:2,5:7:15:130,15,0	1/1:0,8:8:24:208,24,0	1/1:1,8:9:20.97:182,21,0	1/1:0,5:5:15:130,15,0	1/1:1,7:8:20.99:182,21,0	1/1:0,7:7:18:156,18,0	1/1:0,9:9:26.99:234,27,0	1/1:0,9:9:23.99:208,24,0	1/1:0,8:8:24:208,24,0	1/1:2,4:6:13.81:110,14,0	1/1:2,9:11:23.96:205,24,0	1/1:0,3:3:9:78,9,0	1/1:0,2:2:6:52,6,0	1/1:0,2:2:6:52,6,0	1/1:0,3:3:9:78,9,0	1/1:0,1:1:3:26,3,0	1/1:0,11:11:29.99:260,30,0	1/1:1,6:7:18:156,18,0	1/1:1,8:9:24:208,24,0	1/1:1,9:10:26.99:234,27,0
chr10	24349875	.	TTATA	T	3434.23	PASS	AB=1.000;AC=46;AF=0.885;AN=52;BaseQRankSum=-4.314;DP=294;FS=4.807;HRun=0;HaplotypeScore=86.0265;InbreedingCoeff=0.3325;MQ=57.07;MQ0=2;MQRankSum=3.135;QD=14.31;ReadPosRankSum=3.945;VQSLOD=2.6923;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:13:19.96:0,20,103	1/1:4,0:4:3.58:41,4,0	./.	0/0:29,0:11:4.24:0,4,28	1/1:7,3:10:3.17:91,3,0	1/1:15,2:17:28.63:229,29,0	1/1:4,4:8:6.67:75,7,0	1/1:24,5:29:45.06:500,45,0	1/1:6,0:6:2.42:52,2,0	1/1:9,1:11:10.05:159,10,0	1/1:5,0:5:0.70:93,1,0	0/1:7,0:7:10.03:10,0,16	1/1:9,0:9:17.64:145,18,0	1/1:9,0:9:6.37:52,6,0	1/1:4,1:5:6.01:75,6,0	1/1:10,1:11:16.90:122,17,0	1/1:11,1:12:20.48:235,20,0	1/1:8,2:10:19.08:191,19,0	1/1:14,2:16:16.82:277,17,0	1/1:3,0:3:8.81:58,9,0	1/1:4,0:4:5.99:50,6,0	./.	1/1:3,0:3:6:61,6,0	1/1:6,2:8:11.95:145,12,0	0/1:9,0:9:1.54:102,0,2	1/1:14,1:15:10.10:216,10,0	1/1:12,0:13:26.82:233,27,0	1/1:15,0:15:22.51:222,23,0
chr10	24349894	.	T	TGC	2011.80	PASS	AB=0.988;AC=38;AF=0.704;AN=54;BaseQRankSum=0.918;DP=276;FS=20.309;HRun=0;HaplotypeScore=89.6404;InbreedingCoeff=-0.2210;MQ=53.06;MQ0=3;MQRankSum=2.857;QD=7.68;ReadPosRankSum=3.237;VQSLOD=1.8717;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,11:16:1.74:270,2,0	1/1:5,0:5:7.78:47,8,0	0/0:12,0:5:11.98:0,12,141	0/1:23,0:8:0.92:1,0,25	1/1:15,0:15:7.14:56,7,0	1/1:17,0:17:4.81:163,5,0	0/1:8,0:8:36.32:44,0,36	0/1:20,0:20:40.29:183,0,40	1/1:7,0:7:15.53:100,16,0	0/1:13,0:13:1.53:176,0,2	1/1:8,0:8:2.28:74,2,0	1/1:8,0:8:1.28:104,1,0	0/1:9,0:9:13.40:60,0,13	0/1:9,0:9:0.60:43,0,1	0/1:4,1:5:7.70:8,0,24	1/1:9,0:9:20.22:117,20,0	0/1:12,0:12:2.85:96,0,3	0/1:10,0:10:37.57:89,0,38	0/1:11,0:10:23.77:24,0,46	1/1:4,0:4:8.46:46,8,0	1/1:3,0:3:5.68:27,6,0	./.	1/1:3,0:3:2.84:14,3,0	0/1:7,0:7:4.53:70,0,5	1/1:5,0:5:8.58:82,9,0	0/1:11,0:11:27.52:64,0,28	0/1:12,0:12:32.80:77,0,33	0/1:12,0:11:17.73:120,0,18
chr10	24349895	.	ATG	A	1883.87	PASS	AB=0.917;AC=42;AF=0.750;AN=56;BaseQRankSum=-1.370;DP=279;FS=2.146;HRun=0;HaplotypeScore=91.4336;InbreedingCoeff=0.1483;MQ=55.10;MQ0=3;MQRankSum=3.192;QD=7.78;ReadPosRankSum=4.546;VQSLOD=2.7599;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:16:15.47:104,15,0	1/1:5,0:5:1.45:18,1,0	0/0:12,0:6:17.63:0,18,133	0/0:22,0:8:0.86:0,1,12	0/1:14,2:16:13.69:25,0,14	1/1:16,2:18:30.03:179,30,0	0/1:7,1:8:21.59:49,0,22	1/1:20,0:20:25.15:119,25,0	1/1:6,1:7:13.45:75,13,0	0/1:12,1:13:0.44:148,0,0	1/1:8,0:8:0.13:55,0,0	0/1:6,2:8:10.78:12,0,11	1/1:8,1:9:9.50:116,10,0	0/1:9,0:9:9.50:11,0,9	0/1:6,0:6:0.21:10,0,0	1/1:7,2:9:21.30:181,21,0	1/1:10,3:13:9.93:137,10,0	1/1:9,1:10:17.12:96,17,0	1/1:11,0:10:9.82:71,10,0	1/1:2,2:4:8.49:73,8,0	1/1:3,0:3:5.68:28,6,0	0/0:2,0:2:4.07:0,4,12	1/1:3,0:3:5.84:39,6,0	0/1:7,0:7:4.38:34,0,4	0/1:4,1:5:1.92:78,0,2	1/1:9,2:11:9.16:124,9,0	1/1:12,0:12:19.34:159,19,0	1/1:11,0:10:16.96:84,17,0
chr10	24353314	.	C	CT	12763.08	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-7.178;DP=462;FS=0.769;HRun=8;HaplotypeScore=41.6305;InbreedingCoeff=0.9528;MQ=72.21;MQ0=0;MQRankSum=-2.955;QD=29.54;ReadPosRankSum=3.358;VQSLOD=4.6433;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:32.99:0,33,297	1/1:1,10:11:30.09:346,30,0	0/0:7,0:8:13.10:0,13,135	0/0:7,0:7:17.74:0,18,133	1/1:2,20:22:60.05:648,60,0	1/1:1,21:22:63.19:727,63,0	1/1:0,14:14:39.12:450,39,0	1/1:4,25:29:75.15:829,75,0	1/1:0,14:14:42.12:485,42,0	1/1:4,23:27:69.20:796,69,0	1/1:2,23:25:66.20:761,66,0	1/1:3,13:16:39.12:450,39,0	1/1:3,12:15:33.10:381,33,0	1/1:3,12:15:36.11:415,36,0	1/1:1,16:17:42.12:485,42,0	1/1:3,11:14:8.64:353,9,0	1/1:2,7:9:24.07:277,24,0	1/1:1,12:13:27.08:311,27,0	1/1:6,12:18:39.12:450,39,0	1/1:1,20:21:60.18:693,60,0	1/1:2,8:10:27.04:297,27,0	1/1:2,15:17:42.12:485,42,0	1/1:3,17:20:23.69:527,24,0	1/1:2,5:7:12.04:138,12,0	1/1:2,13:15:39.12:450,39,0	1/1:1,20:21:60.18:692,60,0	1/1:1,24:25:69.21:796,69,0	1/1:0,15:15:45.13:519,45,0
chr10	24354571	.	A	AATCT	40473.54	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-8.462;DP=672;FS=0.648;HRun=0;HaplotypeScore=96.2981;InbreedingCoeff=0.9974;MQ=77.65;MQ0=2;MQRankSum=-9.776;QD=63.64;ReadPosRankSum=5.875;VQSLOD=6.3650;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,14:16:42.14:1076,42,0	1/1:2,12:16:39.13:1010,39,0	0/0:17,0:17:48.16:0,48,823	0/0:19,0:19:54.10:0,54,887	1/1:2,39:41:99:2671,102,0	1/1:3,27:30:81.28:2108,81,0	1/1:5,13:19:36.12:948,36,0	1/1:15,21:37:84.27:2122,84,0	1/1:2,21:23:66.23:1718,66,0	1/1:4,26:30:78.25:1958,78,0	1/1:2,26:29:66.23:1742,66,0	1/1:0,17:17:48.16:1266,48,0	1/1:1,28:30:81.28:2135,81,0	1/1:3,21:25:66.23:1699,66,0	1/1:3,21:24:66.23:1723,66,0	1/1:5,17:24:54.19:1406,54,0	1/1:4,15:19:48.16:1267,48,0	1/1:5,7:12:28.65:716,29,0	1/1:8,17:24:54.18:1406,54,0	1/1:1,26:28:78.27:2047,78,0	1/1:3,17:20:39.13:999,39,0	1/1:2,17:20:45.15:1188,45,0	1/1:4,20:27:56.62:1492,57,0	1/1:5,23:29:63.22:1651,63,0	1/1:2,18:19:54.19:1416,54,0	1/1:6,35:42:99:2809,111,0	1/1:3,19:23:51.17:1346,51,0	1/1:0,7:7:21.07:554,21,0
chr10	24359515	.	ATGTGTGTG	A	17892.27	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-9.896;DP=625;FS=1.946;HRun=0;HaplotypeScore=178.8688;InbreedingCoeff=0.9510;MQ=63.49;MQ0=10;MQRankSum=-11.835;QD=46.59;ReadPosRankSum=2.797;VQSLOD=4.3522;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:22:40.48:0,40,399	1/1:3,5:8:15.05:389,15,0	0/0:42,0:16:9:0,9,241	0/0:38,0:14:6.02:0,6,136	1/1:6,18:25:42.14:1057,42,0	1/1:3,18:21:42.14:1090,42,0	1/1:10,13:23:29.97:778,30,0	0/0:18,0:37:72.18:0,72,1684	0/0:7,0:18:29.97:0,30,248	1/1:8,20:29:52.47:1264,52,0	1/1:4,17:21:48.16:1246,48,0	1/1:4,18:22:45.15:1168,45,0	1/1:7,21:28:63.22:1635,63,0	1/1:5,13:18:36.12:934,36,0	1/1:7,15:22:33.11:856,33,0	1/1:5,15:20:39.13:1012,39,0	0/0:6,0:11:17.99:0,18,173	0/0:3,0:14:29.96:0,30,259	0/0:5,0:9:14.43:0,14,134	0/0:9,0:30:62.93:0,63,542	0/0:6,0:19:32.96:0,33,273	1/1:6,15:21:39.13:1012,39,0	1/1:13,20:34:60.21:1495,60,0	1/1:5,5:10:6.02:156,6,0	1/1:5,19:25:42.14:1068,42,0	1/1:7,21:29:66.16:1496,66,0	1/1:6,13:19:33.11:845,33,0	1/1:1,8:9:15.05:389,15,0
chr10	24362289	.	CTAAACCACACAAT	C	656.56	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=4.855;DP=603;FS=0.000;HRun=0;HaplotypeScore=210.7559;InbreedingCoeff=0.7071;MQ=68.40;MQ0=0;MQRankSum=-1.419;QD=17.74;ReadPosRankSum=-2.953;VQSLOD=2.1523;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:48.16:0,48,2874	0/0:9,0:9:24.08:0,24,1400	0/0:26,0:26:60.16:0,60,2688	0/0:23,0:23:63.22:0,63,3713	0/0:33,0:33:84.29:0,84,4868	0/0:31,0:31:78.27:0,78,4970	0/0:16,0:16:42.14:0,42,2560	1/1:11,9:19:27.08:750,27,0	0/0:19,0:19:51.18:0,51,3097	0/0:33,0:33:81.28:0,81,4928	0/0:22,0:22:63.22:0,63,3740	0/0:24,0:24:54.19:0,54,3183	0/0:29,0:29:87.28:0,87,5245	0/0:17,0:17:48.16:0,48,2837	0/0:17,0:17:45.15:0,45,2739	0/0:21,0:21:60.21:0,60,3688	0/0:18,0:18:48.16:0,48,2783	0/1:17,0:17:3.79:4,0,1820	0/0:19,0:19:42.14:0,42,2440	0/0:34,0:34:96.32:0,96,5656	0/0:5,0:5:12.04:0,12,704	0/0:22,0:22:66.23:0,66,3765	0/0:20,0:20:57.20:0,57,3311	0/0:17,0:17:42.14:0,42,2599	0/0:26,0:26:72.25:0,72,4086	0/0:16,0:16:45.15:0,45,2534	0/0:35,0:34:90.31:0,90,5398	0/0:14,0:14:39.13:0,39,2294
chr10	24363686	.	CA	C	13128.42	PASS	AC=50;AF=0.962;AN=52;BaseQRankSum=1.984;DP=569;FS=0.000;HRun=6;HaplotypeScore=107.2137;InbreedingCoeff=0.9450;MQ=51.79;MQ0=25;MQRankSum=-0.533;QD=24.86;ReadPosRankSum=-0.297;VQSLOD=3.6046;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:24.08:0,24,316	1/1:0,8:8:21.05:226,21,0	./.	./.	1/1:4,24:28:72.12:753,72,0	1/1:0,17:17:48.12:516,48,0	1/1:3,15:18:36.09:387,36,0	1/1:6,25:29:72.17:773,72,0	1/1:2,23:19:51.13:547,51,0	1/1:6,25:31:72.16:766,72,0	1/1:2,18:20:51.13:548,51,0	1/1:1,15:16:45.11:484,45,0	1/1:1,21:21:54.13:580,54,0	1/1:2,36:37:96.22:1022,96,0	1/1:2,24:26:66.17:709,66,0	1/1:3,14:17:36.05:374,36,0	1/1:0,16:13:29.58:321,30,0	1/1:0,16:13:36.06:375,36,0	1/1:4,11:12:21.05:225,21,0	1/1:1,25:20:45.10:483,45,0	1/1:4,7:11:14.99:148,15,0	1/1:2,19:21:51.13:548,51,0	1/1:0,21:21:57.14:612,57,0	1/1:2,21:23:57.14:613,57,0	1/1:3,18:21:51.13:548,51,0	1/1:4,21:25:60.13:636,60,0	1/1:2,25:27:75.19:806,75,0	1/1:0,9:9:12.03:129,12,0
chr10	24364600	.	AAG	A	766.27	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.454;DP=484;FS=4.356;HRun=0;HaplotypeScore=52.9099;InbreedingCoeff=0.8686;MQ=65.56;MQ0=0;MQRankSum=-0.941;QD=30.65;ReadPosRankSum=-3.168;VQSLOD=3.6739;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:36.58:0,37,622	0/0:11,0:11:30.06:0,30,482	0/0:4,0:4:6.02:0,6,103	0/0:5,0:5:12.02:0,12,172	0/0:38,0:38:99:0,108,1917	0/0:22,0:22:66.20:0,66,1130	0/0:12,0:12:36.11:0,36,615	1/1:3,22:25:63.18:861,63,0	0/0:9,0:9:27.09:0,27,484	0/0:33,0:33:99:0,99,1728	0/0:24,0:24:69.16:0,69,1099	0/0:15,0:15:45.11:0,45,729	0/0:11,0:11:33.08:0,33,539	0/0:15,0:15:45.13:0,45,758	0/0:20,0:20:57.17:0,57,975	0/0:21,0:21:60.19:0,60,1045	0/0:18,0:18:48.02:0,48,795	0/0:18,0:18:51.17:0,51,920	0/0:24,0:24:60.21:0,60,1084	0/0:20,0:20:59.23:0,59,1033	0/0:9,0:9:27.08:0,27,461	0/0:8,0:8:18.06:0,18,327	0/0:20,0:20:60.19:0,60,1059	0/0:12,0:12:36.11:0,36,615	0/0:18,0:18:54.19:0,54,973	0/0:23,0:23:66.21:0,66,1134	0/0:27,0:27:75.26:0,75,1353	0/0:9,0:9:21.02:0,21,290
chr10	24365031	.	CTG	C	1568.84	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.568;DP=645;FS=0.000;HRun=0;HaplotypeScore=76.5499;InbreedingCoeff=0.9398;MQ=86.11;MQ0=0;MQRankSum=-1.272;QD=37.35;ReadPosRankSum=-3.416;VQSLOD=4.6262;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:81.28:0,81,1474	0/0:8,0:8:24.08:0,24,440	0/0:25,0:25:66.21:0,66,1154	0/0:19,0:19:54.13:0,54,889	0/0:27,0:27:81.28:0,81,1485	0/0:26,0:26:75.26:0,75,1375	0/0:22,0:22:66.20:0,66,1149	1/1:2,40:42:99:1664,120,0	0/0:26,0:26:78.24:0,78,1370	0/0:15,0:15:45.15:0,45,823	0/0:28,0:28:84.29:0,84,1534	0/0:15,0:15:45.14:0,45,789	0/0:34,0:34:99:0,99,1793	0/0:35,0:35:99:0,99,1808	0/0:32,0:32:90.31:0,90,1637	0/0:27,0:27:78.27:0,78,1418	0/0:18,0:18:54.19:0,54,990	0/0:7,0:7:21.07:0,21,375	0/0:26,0:26:69.23:0,69,1236	0/0:27,0:27:81.28:0,81,1479	0/0:20,0:20:57.18:0,57,1014	0/0:20,0:20:60.21:0,60,1085	0/0:17,0:17:51.17:0,51,926	0/0:14,0:14:42.14:0,42,770	0/0:26,0:26:78.27:0,78,1402	0/0:29,0:29:84.29:0,84,1530	0/0:30,0:30:87.30:0,87,1583	0/0:3,0:3:9.03:0,9,165
chr10	24365641	.	A	AT	12808.88	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=15.274;DP=485;FS=7.589;HRun=2;HaplotypeScore=86.5633;InbreedingCoeff=0.9897;MQ=73.40;MQ0=0;MQRankSum=-1.301;QD=38.93;ReadPosRankSum=5.848;VQSLOD=4.6518;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:48.13:0,48,579	1/1:0,6:6:12.04:173,12,0	0/0:10,0:10:27.05:0,27,302	0/0:5,0:5:14.91:0,15,160	1/1:0,25:25:72.24:1027,72,0	1/1:0,22:22:63.21:906,63,0	1/1:0,17:17:48.16:691,48,0	0/0:32,0:32:87.27:0,87,1067	0/0:16,0:16:45.13:0,45,546	1/1:0,27:27:81.23:1111,81,0	1/1:2,20:22:51.17:734,51,0	1/1:0,16:16:48.16:691,48,0	1/1:1,19:20:54.18:776,54,0	1/1:1,13:14:33.11:475,33,0	1/1:1,12:13:30.10:432,30,0	1/1:0,9:9:24.08:345,24,0	0/0:17,0:17:48.10:0,48,576	0/0:14,0:14:39.04:0,39,444	0/0:13,0:13:39.11:0,39,462	0/0:20,0:20:60.16:0,60,717	0/0:9,0:9:24.07:0,24,295	1/1:1,18:19:48.16:681,48,0	1/1:0,26:26:66.13:950,66,0	1/1:0,6:6:18.06:259,18,0	1/1:1,22:22:66.22:950,66,0	1/1:2,34:36:99:1444,102,0	1/1:0,22:22:63.21:906,63,0	1/1:0,6:6:18.06:259,18,0
chr10	24366806	.	C	CA	732.54	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=-5.779;DP=610;FS=14.085;HRun=7;HaplotypeScore=62.7000;InbreedingCoeff=0.5621;MQ=61.11;MQ0=2;MQRankSum=0.633;QD=16.65;ReadPosRankSum=-5.210;VQSLOD=1.0835;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:33:77.09:0,77,714	0/0:10,0:10:27.04:0,27,261	0/1:13,0:6:9.03:9,0,124	0/0:22,0:18:1.90:0,2,243	0/0:32,1:33:50.89:0,51,774	0/0:24,0:24:69.09:0,69,661	0/0:9,0:9:27.02:0,27,253	1/1:7,24:31:72.64:825,73,0	0/0:13,0:13:33.03:0,33,313	0/0:22,0:22:60.10:0,60,579	0/0:18,0:18:39.05:0,39,375	0/0:16,0:16:48.06:0,48,457	0/0:23,0:23:69.09:0,69,661	0/0:35,0:35:90.14:0,90,868	0/0:24,0:24:63.10:0,63,608	0/0:16,0:16:45.06:0,45,429	0/0:21,0:23:54.07:0,54,517	0/0:21,0:22:45.80:0,46,516	0/0:16,0:15:36.05:0,36,348	0/0:31,0:31:84.13:0,84,811	0/0:21,0:21:63.10:0,63,608	0/0:21,0:21:54.04:0,54,506	0/0:31,0:31:75.11:0,75,724	0/0:18,0:19:53.09:0,53,490	0/0:22,0:22:60.08:0,60,572	0/0:31,0:30:87.14:0,87,840	0/0:27,0:27:78.06:0,78,737	0/0:3,0:3:9.01:0,9,87
chr10	24367078	.	GCACTCA	G	27467.22	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=17.825;DP=751;FS=4.877;HRun=0;HaplotypeScore=181.4860;InbreedingCoeff=0.9895;MQ=44.06;MQ0=8;MQRankSum=-17.947;QD=58.57;ReadPosRankSum=2.361;VQSLOD=5.0360;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,105,3818	1/1:1,10:11:30.10:738,30,0	0/0:27,0:16:44.74:0,45,1383	0/0:20,0:12:33.11:0,33,1174	1/1:1,26:26:60.21:1476,60,0	1/1:0,34:34:93.32:2284,93,0	1/1:1,16:17:36.12:881,36,0	0/0:33,0:32:96.33:0,96,3519	0/0:24,0:24:69.21:0,69,2499	1/1:5,21:25:63.19:1453,63,0	1/1:1,26:27:57.20:1387,57,0	1/1:3,22:25:63.22:1550,63,0	1/1:1,24:24:66.23:1624,66,0	1/1:1,35:35:84.29:2064,84,0	1/1:1,23:24:54.19:1328,54,0	1/1:2,25:27:69.24:1698,69,0	0/0:21,0:21:63.22:0,63,2209	0/0:22,0:22:57.15:0,57,1946	0/0:24,0:21:59.86:0,60,2083	0/0:30,1:31:16.46:0,16,2923	0/0:41,0:41:99:0,123,4299	1/1:3,29:32:69.24:1697,69,0	1/1:4,34:38:38.09:2081,38,0	1/1:2,18:19:45.15:1107,45,0	1/1:2,35:37:90.31:2209,90,0	1/1:3,22:25:66.20:1527,66,0	1/1:1,34:35:87.03:2141,87,0	1/1:0,3:3:9.03:222,9,0
chr10	24370158	.	GTC	G	13460.17	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=6.179;DP=463;FS=2.315;HRun=0;HaplotypeScore=58.8622;InbreedingCoeff=0.9558;MQ=74.00;MQ0=4;MQRankSum=-3.777;QD=34.34;ReadPosRankSum=7.689;VQSLOD=6.5191;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:48.13:0,48,816	1/1:1,5:6:12.04:172,12,0	0/0:11,0:11:25.96:0,26,416	0/0:14,0:14:39.07:0,39,593	1/1:2,21:23:63.21:894,63,0	1/1:1,21:22:39.13:558,39,0	1/1:0,13:14:14.87:411,15,0	0/0:30,0:30:81.25:0,81,1348	1/1:0,11:11:24.08:343,24,0	1/1:2,29:31:84.25:1180,84,0	1/1:0,21:21:60.20:858,60,0	1/1:0,15:15:39.13:558,39,0	1/1:1,15:16:26.96:382,27,0	1/1:1,24:25:63.21:901,63,0	1/1:1,16:17:36.12:515,36,0	1/1:0,14:14:42.14:601,42,0	1/1:0,10:10:24.08:336,24,0	1/1:1,9:10:27.09:385,27,0	1/1:2,13:15:39.10:509,39,0	1/1:0,20:20:50.90:730,51,0	1/1:0,12:12:30.10:429,30,0	1/1:0,11:11:27.09:378,27,0	1/1:0,14:13:27.09:386,27,0	1/1:0,10:10:27.09:387,27,0	1/1:1,15:16:36.12:515,36,0	1/1:1,25:26:75.23:1053,75,0	1/1:1,27:28:63.21:891,63,0	1/1:2,3:2:6.02:86,6,0
chr10	24372054	.	T	TA	2377.53	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-8.077;DP=454;FS=0.491;HRun=9;HaplotypeScore=49.8123;InbreedingCoeff=0.9635;MQ=81.34;MQ0=0;MQRankSum=-1.288;QD=24.26;ReadPosRankSum=0.199;VQSLOD=4.1913;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:29.98:0,30,260	0/0:11,0:11:26.99:0,27,234	0/0:21,0:15:13.01:0,13,88	0/0:17,0:18:8.93:0,9,173	0/0:22,0:22:53.85:0,54,468	0/0:23,0:23:65.96:0,66,568	0/0:12,0:12:35.99:0,36,313	0/0:21,0:21:53.81:0,54,440	1/1:1,13:14:30.08:332,30,0	0/0:20,0:20:50.98:0,51,441	0/0:14,0:14:35.97:0,36,308	0/0:12,0:12:29.98:0,30,260	0/0:15,0:15:32.98:0,33,284	0/0:13,0:13:29.96:0,30,253	0/0:23,0:23:65.99:0,66,573	0/0:23,0:23:59.98:0,60,521	1/1:1,20:21:48.13:530,48,0	1/1:3,7:11:29.65:291,30,0	1/1:0,20:20:60.13:644,60,0	1/1:5,17:22:51.03:535,51,0	1/1:1,9:10:21.06:232,21,0	0/0:8,0:8:14.99:0,15,130	0/0:12,0:12:29.98:0,30,256	0/0:6,0:6:15:0,15,130	0/0:27,0:27:68.98:0,69,597	0/0:17,0:17:47.99:0,48,417	0/0:22,0:22:53.97:0,54,468	0/0:3,0:3:9:0,9,78
chr10	24372171	.	CATAT	C	10782.36	PASS	AC=46;AF=0.885;AN=52;BaseQRankSum=-6.182;DP=316;FS=3.743;HRun=0;HaplotypeScore=58.7855;InbreedingCoeff=0.6574;MQ=66.52;MQ0=2;MQRankSum=-1.961;QD=38.10;ReadPosRankSum=2.183;VQSLOD=4.8538;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:0,0:11:27.93:0,28,127	1/1:3,2:5:3.01:52,3,0	0/0:8,0:4:0:0,0,0	0/0:10,0:6:7.78:0,8,44	1/1:0,22:22:60.21:1031,60,0	1/1:2,19:21:48.16:829,48,0	1/1:0,2:2:6.02:104,6,0	1/1:3,18:21:54.17:896,54,0	1/1:2,8:9:18.06:311,18,0	1/1:2,8:10:24.08:409,24,0	1/1:1,13:15:36.04:587,36,0	1/1:1,7:8:21.07:363,21,0	1/1:1,6:7:15.05:259,15,0	1/1:2,4:6:9.03:155,9,0	1/1:2,4:6:9.03:155,9,0	1/1:2,6:8:15.05:259,15,0	1/1:3,11:14:33.11:570,33,0	1/1:6,12:18:33.11:569,33,0	1/1:3,10:13:30.10:518,30,0	1/1:2,12:14:36.12:622,36,0	./.	1/1:1,2:3:6.02:104,6,0	1/1:3,3:6:3.01:52,3,0	./.	1/1:3,22:25:60.20:1036,60,0	1/1:1,17:18:51.17:881,51,0	1/1:2,19:22:35.36:765,35,0	1/1:4,5:9:15.05:256,15,0
chr10	24372804	.	TA	T	488.35	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.667;DP=533;FS=7.018;HRun=8;HaplotypeScore=48.9519;InbreedingCoeff=0.9717;MQ=72.56;MQ0=0;MQRankSum=-0.272;QD=18.78;ReadPosRankSum=-4.177;VQSLOD=2.0361;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:14:42.09:0,42,491	0/0:10,0:10:30.09:0,30,362	0/0:12,0:12:19.71:0,20,282	0/0:7,0:6:15.01:0,15,158	0/0:21,0:21:63.17:0,63,744	0/0:22,0:22:48.14:0,48,569	0/0:16,0:16:48.15:0,48,580	1/1:5,21:26:63.01:583,63,0	0/0:26,0:26:63.14:0,63,743	0/0:16,1:17:19.17:0,19,507	0/0:26,0:26:63.19:0,63,761	0/0:13,0:13:36.08:0,36,421	0/0:28,0:28:66.19:0,66,785	0/0:27,0:27:81.21:0,81,962	0/0:21,0:21:60.16:0,60,711	0/0:21,0:21:60.18:0,60,725	0/0:18,0:18:51.16:0,51,616	0/0:19,0:19:48.12:0,48,565	0/0:16,0:16:45.14:0,45,544	0/0:22,0:22:60.18:0,60,725	0/0:11,0:11:30.05:0,30,335	0/0:30,0:30:81.22:0,81,947	0/0:22,0:22:66.19:0,66,786	0/0:18,0:18:42.13:0,42,507	0/0:20,0:20:60.18:0,60,725	0/0:20,0:20:51.12:0,51,584	0/0:18,0:18:48.14:0,48,571	0/0:11,0:11:33.10:0,33,399
chr10	24372994	.	GA	G	8285.96	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=4.437;DP=575;FS=27.251;HRun=10;HaplotypeScore=81.3912;InbreedingCoeff=0.9599;MQ=63.49;MQ0=5;MQRankSum=-0.913;QD=19.31;ReadPosRankSum=3.591;VQSLOD=3.7766;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,46:52:99:963,111,0	1/1:0,10:10:26.99:234,27,0	0/0:14,0:6:17.12:0,17,148	0/0:20,0:16:24.84:0,25,319	1/1:4,18:22:44.99:390,45,0	1/1:2,12:14:32.99:286,33,0	1/1:3,14:17:38.99:339,39,0	1/1:6,23:27:62.98:547,63,0	0/0:15,0:15:33.07:0,33,356	1/1:2,19:21:53.93:462,54,0	1/1:2,24:26:65.98:571,66,0	1/1:4,15:19:44.03:371,44,0	1/1:2,18:20:41.99:364,42,0	1/1:3,19:22:47.98:416,48,0	1/1:2,22:24:43.46:501,43,0	1/1:2,15:16:16.17:313,16,0	0/0:26,0:26:57.13:0,57,621	0/0:18,0:18:39.10:0,39,430	0/0:17,2:20:1.90:0,2,454	0/0:19,0:19:53.97:0,54,570	0/0:13,0:13:36.10:0,36,398	1/1:4,18:22:44.99:390,45,0	1/1:3,9:12:26.03:214,26,0	1/1:6,21:27:56.47:494,56,0	1/1:4,21:25:50.98:442,51,0	1/1:2,17:19:47.99:416,48,0	1/1:2,17:19:44.99:391,45,0	1/1:1,10:11:20.99:182,21,0
chr10	24373296	.	AACACACACAC	A	763.95	PASS	AB=0.879;AC=9;AF=0.161;AN=56;BaseQRankSum=-0.009;DP=507;FS=4.150;HRun=0;HaplotypeScore=178.4683;InbreedingCoeff=0.4855;MQ=66.73;MQ0=7;MQRankSum=-2.923;QD=8.58;ReadPosRankSum=-1.935;VQSLOD=1.8651;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:36:48.14:0,48,1214	0/0:7,0:7:9.01:0,9,214	0/0:34,0:27:18.01:0,18,380	0/0:24,0:17:21.06:0,21,366	0/0:17,0:17:15.36:0,15,511	0/0:21,0:21:33.56:0,34,1123	0/0:35,0:34:59.72:0,60,1938	0/0:15,0:15:21.07:0,21,449	1/1:9,3:12:3.01:85,3,0	0/0:22,0:23:57.19:0,57,1885	0/0:13,0:13:12.04:0,12,471	0/0:23,0:22:48.16:0,48,1481	0/0:20,0:19:44.42:0,44,1139	0/0:16,0:16:21.07:0,21,529	0/0:18,0:18:24.07:0,24,775	0/0:14,0:15:35.80:0,36,1038	0/1:8,3:13:32.69:329,0,33	1/1:7,4:9:14.12:263,14,0	0/1:11,0:11:17.13:44,0,17	1/1:8,2:9:11.98:145,12,0	0/1:29,1:25:43.95:44,0,104	0/0:15,0:15:20.79:0,21,654	0/0:5,0:5:6.02:0,6,177	0/0:23,0:23:37.97:0,38,1431	0/0:18,0:18:31.91:0,32,999	0/0:10,0:9:21.07:0,21,730	0/0:11,0:11:12.64:0,13,586	0/0:18,0:17:42.14:0,42,1114
chr10	24373337	.	ACGCACG	A	1374.46	PASS	AB=0.959;AC=20;AF=0.385;AN=52;BaseQRankSum=-3.752;DP=476;FS=5.974;HRun=0;HaplotypeScore=140.0071;InbreedingCoeff=-0.1567;MQ=43.60;MQ0=23;MQRankSum=-1.773;QD=4.77;ReadPosRankSum=-3.409;VQSLOD=1.2501;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:36:26.49:0,26,354	0/1:8,0:8:17.32:17,0,52	./.	./.	0/1:15,0:14:11.80:12,0,122	0/1:20,0:19:67.67:68,0,278	0/0:33,0:31:15.40:0,15,522	0/1:20,0:18:53.63:114,0,54	0/1:13,0:12:6.40:222,0,6	0/0:17,0:17:41.43:0,41,716	0/1:10,0:10:30.74:31,0,108	0/1:24,0:23:4.95:5,0,377	0/0:17,0:16:30.68:0,31,343	0/1:22,0:22:30.63:31,0,198	0/0:18,0:17:9.30:0,9,252	0/0:24,0:24:13.20:0,13,455	1/1:10,1:10:15.05:220,15,0	1/1:10,1:9:20.12:261,20,0	1/1:3,4:6:12.02:217,12,0	0/1:4,6:10:10.29:10,0,28	0/1:33,0:21:76.78:77,0,89	0/1:15,0:16:22.37:22,0,120	0/0:8,0:8:3.01:0,3,39	0/1:26,0:26:44.20:44,0,494	0/1:26,0:26:91.33:91,0,411	0/0:15,0:13:2.42:0,2,419	0/1:11,0:12:95.35:95,0,123	0/0:13,0:12:25.84:0,26,352
chr10	24373341	.	ACG	A	1404.01	PASS	AB=0.965;AC=21;AF=0.389;AN=54;BaseQRankSum=-4.663;DP=507;FS=8.719;HRun=0;HaplotypeScore=123.3885;InbreedingCoeff=-0.3681;MQ=44.27;MQ0=22;MQRankSum=-2.880;QD=3.74;ReadPosRankSum=-4.751;VQSLOD=-0.3160;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:40:22.36:0,22,168	0/1:10,0:10:23.28:48,0,23	./.	0/0:4,0:3:1.97:0,2,38	0/1:15,0:14:18.38:18,0,42	0/1:19,1:19:87.14:87,0,134	0/1:35,0:32:41.13:41,0,211	0/1:29,0:26:4.38:222,0,4	0/1:12,3:14:4.75:145,0,5	0/0:17,0:17:24.04:0,24,320	0/1:8,1:9:30.98:31,0,40	0/1:27,0:25:59.12:59,0,101	0/0:16,0:15:21.44:0,21,159	0/1:21,0:21:33.03:33,0,97	0/1:22,0:21:38.26:38,0,91	0/0:24,0:24:3.84:0,4,227	1/1:6,5:10:14.76:131,15,0	1/1:7,3:9:5.25:153,5,0	0/1:8,1:7:18.70:113,0,19	0/0:10,0:10:5.50:0,6,42	0/1:31,7:26:32.66:33,0,70	0/1:16,0:16:43.02:72,0,43	0/0:8,0:8:2.97:0,3,20	0/1:30,1:30:62.92:63,0,209	0/1:28,0:28:99:128,0,158	0/1:18,0:16:49.15:49,0,186	0/1:11,0:11:23.24:96,0,23	0/0:12,0:10:20.29:0,20,165
chr10	24374649	.	A	AT	913.14	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-8.166;DP=613;FS=11.849;HRun=8;HaplotypeScore=56.0270;InbreedingCoeff=0.9645;MQ=78.90;MQ0=0;MQRankSum=0.812;QD=26.86;ReadPosRankSum=-5.210;VQSLOD=1.3231;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:84.01:0,84,763	0/0:10,0:10:27.01:0,27,247	0/0:19,0:19:48:0,48,431	0/0:13,0:13:20.70:0,21,190	0/0:31,0:31:87:0,87,781	0/0:23,0:23:60.02:0,60,549	0/0:14,0:14:39.02:0,39,357	1/1:4,29:34:90.09:1008,90,0	0/0:20,0:20:57.02:0,57,517	0/0:19,0:19:45.02:0,45,412	0/0:25,0:26:74.06:0,74,660	0/0:18,0:18:54.01:0,54,489	0/0:21,0:21:63.03:0,63,577	0/0:15,0:15:39.02:0,39,357	0/0:24,0:25:71.07:0,71,637	0/0:35,0:35:99:0,105,956	0/0:31,0:31:84.04:0,84,769	0/0:15,0:15:39.02:0,39,357	0/0:20,0:20:51.02:0,51,464	0/0:33,0:33:90.05:0,90,824	0/0:15,0:15:42:0,42,379	0/0:28,0:28:78.04:0,78,714	0/0:18,0:18:48.02:0,48,439	0/0:12,0:12:33.02:0,33,302	0/0:22,0:22:60.02:0,60,549	0/0:30,0:30:69.01:0,69,625	0/0:29,0:28:87.05:0,87,796	0/0:5,0:5:12.01:0,12,110
chr10	24374952	.	GAC	G	2854.65	PASS	AB=0.760;AC=14;AF=0.250;AN=56;BaseQRankSum=4.632;DP=689;FS=0.879;HRun=0;HaplotypeScore=100.8306;InbreedingCoeff=0.7756;MQ=57.92;MQ0=15;MQRankSum=-0.361;QD=15.95;ReadPosRankSum=1.860;VQSLOD=3.4257;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:30,1:31:22.07:22,0,336	0/0:8,0:8:21.05:0,21,309	0/0:36,0:13:23.48:0,23,290	0/0:60,1:19:30.44:0,30,389	0/0:24,0:24:60.20:0,60,965	0/0:27,0:27:60.19:0,60,949	0/0:24,0:24:48.15:0,48,746	0/1:5,0:25:60.26:60,0,79	1/1:4,18:22:42.13:521,42,0	0/0:23,0:23:54.18:0,54,855	0/0:24,0:24:57.17:0,57,885	0/0:25,1:26:63.21:0,63,1016	0/0:27,0:27:63.20:0,63,987	0/0:21,0:21:51.16:0,51,784	0/0:25,0:25:66.21:0,66,1050	0/0:23,0:23:48.16:0,48,787	1/1:4,27:30:33.20:643,33,0	1/1:3,10:13:9.18:280,9,0	1/1:4,12:16:35.74:404,36,0	1/1:5,15:20:39.12:483,39,0	1/1:1,18:19:51.16:632,51,0	0/0:19,0:19:48.16:0,48,787	0/0:20,0:20:45.14:0,45,697	0/0:34,2:34:72.16:0,72,1099	0/0:18,1:19:4.95:0,5,591	0/0:28,1:29:35:0,35,1011	0/0:31,1:31:41:0,41,1156	0/0:6,0:6:18.06:0,18,295
chr10	24375012	.	GACAC	G	1038.04	PASS	AC=12;AF=0.261;AN=46;BaseQRankSum=-6.213;DP=578;FS=3.900;HRun=0;HaplotypeScore=107.7569;InbreedingCoeff=0.6388;MQ=43.29;MQ0=42;MQRankSum=4.072;QD=9.11;ReadPosRankSum=2.899;VQSLOD=2.6426;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:23:5.88:90,6,0	0/0:5,0:5:2.92:0,3,17	./.	./.	0/0:26,0:25:16:0,16,203	0/0:27,0:25:14.93:0,15,154	0/0:14,0:12:0:0,0,0	0/0:38,0:30:6.64:0,7,17	1/1:15,0:15:15.04:188,15,0	0/0:16,0:15:23.26:0,23,252	0/0:15,0:13:3.01:0,3,48	0/0:20,0:17:11.80:0,12,96	0/0:23,0:23:26.73:0,27,233	0/0:19,0:17:9.48:0,9,103	0/0:23,0:21:9.50:0,10,142	0/0:23,0:22:4.49:0,4,16	1/1:27,0:25:0.05:376,0,0	1/1:11,0:10:12:134,12,0	1/1:9,4:12:12.54:118,13,0	./.	1/1:24,0:22:4.60:277,5,0	0/0:17,0:16:2.94:0,3,18	./.	./.	0/0:18,0:17:8.96:0,9,116	0/0:20,0:19:36.33:0,36,376	0/0:24,0:21:22.09:0,22,246	0/0:6,0:6:5.99:0,6,59
chr10	24375132	.	GT	G	7177.01	PASS	AB=1.000;AC=37;AF=0.661;AN=56;BaseQRankSum=2.868;DP=605;FS=18.930;HRun=11;HaplotypeScore=84.6073;InbreedingCoeff=0.9497;MQ=77.28;MQ0=0;MQRankSum=1.237;QD=18.36;ReadPosRankSum=4.129;VQSLOD=4.1619;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:30:60.24:0,60,342	1/1:2,7:9:17.98:148,18,0	0/0:25,0:25:31.89:0,32,428	0/1:14,0:14:1.53:2,0,42	1/1:2,22:24:37.40:467,37,0	1/1:2,24:26:65.89:539,66,0	1/1:3,10:13:20.97:172,21,0	0/0:29,0:25:29.94:0,30,199	0/0:20,0:20:60.15:0,60,637	1/1:2,20:22:30.94:461,31,0	1/1:4,24:28:65.90:541,66,0	1/1:2,18:20:47.90:392,48,0	1/1:7,16:23:48.46:454,48,0	1/1:4,11:15:16.20:208,16,0	1/1:1,18:19:50.94:418,51,0	1/1:2,18:20:56.90:464,57,0	0/0:24,0:24:62.89:0,63,649	0/0:17,0:17:45.11:0,45,478	0/0:19,0:20:44.94:0,45,454	0/0:27,0:27:72.18:0,72,767	0/0:21,0:22:59.88:0,60,590	1/1:3,24:28:71.90:591,72,0	1/1:2,19:21:47.83:434,48,0	1/1:3,13:15:32.95:271,33,0	1/1:3,20:23:43.15:366,43,0	1/1:5,22:27:62.87:513,63,0	1/1:1,22:24:32.98:466,33,0	1/1:6,12:18:32.93:271,33,0
chr10	24376474	.	T	TCTGGTGTCGACTG	58011.35	PASS	AB=1.000;AC=51;AF=0.911;AN=56;BaseQRankSum=-11.041;DP=430;FS=0.528;HRun=0;HaplotypeScore=137.0727;InbreedingCoeff=0.6681;MQ=86.74;MQ0=0;MQRankSum=-9.293;QD=151.07;ReadPosRankSum=7.463;VQSLOD=4.9076;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,27:32:84.29:5443,84,0	1/1:0,3:4:9.03:599,9,0	0/0:21,0:20:51.16:0,51,1700	0/0:25,0:25:69.22:0,69,2474	1/1:1,10:13:30.10:1966,30,0	1/1:0,10:10:30.10:1994,30,0	1/1:0,8:11:24.08:1553,24,0	0/1:24,0:24:54.71:55,0,300	1/1:0,15:17:45.15:2991,45,0	1/1:0,14:18:54.16:3051,54,0	1/1:0,9:13:27.09:1751,27,0	1/1:0,12:16:36.12:2393,36,0	1/1:0,19:23:60.21:3979,60,0	1/1:2,19:23:60.21:3981,60,0	1/1:1,17:21:54.19:3587,54,0	1/1:0,20:23:60.21:3972,60,0	1/1:0,7:9:21.07:1389,21,0	1/1:0,2:6:6.02:403,6,0	1/1:0,4:6:18.03:849,18,0	1/1:0,13:15:39.13:2585,39,0	1/1:0,3:9:9.03:599,9,0	1/1:0,10:14:33.11:2174,33,0	1/1:0,12:12:36.12:2388,36,0	1/1:0,8:11:13.34:993,13,0	1/1:0,11:15:33.11:2195,33,0	1/1:0,11:13:39.12:2343,39,0	1/1:1,22:24:66.23:4381,66,0	1/1:0,2:2:6.02:400,6,0
chr10	24376718	.	CT	C	22109.83	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-0.973;DP=666;FS=2.170;HRun=2;HaplotypeScore=79.1789;InbreedingCoeff=0.9541;MQ=80.87;MQ0=0;MQRankSum=-10.011;QD=35.43;ReadPosRankSum=4.422;VQSLOD=5.3813;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,30:30:81.26:1048,81,0	1/1:0,12:12:33.11:428,33,0	0/0:17,0:17:51.16:0,51,744	0/0:24,0:25:9.85:0,10,779	1/1:1,33:34:93.30:1201,93,0	1/1:0,29:29:84.27:1090,84,0	1/1:0,12:12:33.11:429,33,0	1/1:0,27:27:81.26:1050,81,0	1/1:0,28:28:78.25:1013,78,0	1/1:0,32:32:93.29:1193,93,0	1/1:0,33:33:93.30:1203,93,0	1/1:0,32:32:78.25:1013,78,0	1/1:0,20:20:57.19:740,57,0	1/1:1,13:14:33.11:428,33,0	1/1:0,35:35:87.28:1130,87,0	1/1:0,18:18:48.16:621,48,0	1/1:0,20:20:57.18:735,57,0	1/1:0,7:7:21.07:272,21,0	1/1:1,23:24:69.20:875,69,0	1/1:0,35:35:99:1280,99,0	1/1:0,5:5:12.04:156,12,0	1/1:0,23:23:63.20:803,63,0	1/1:0,38:38:99:1266,99,0	1/1:0,23:23:63.20:818,63,0	1/1:2,21:23:51.17:662,51,0	1/1:0,33:33:99:1254,99,0	1/1:0,29:29:87.28:1129,87,0	1/1:0,8:8:21.07:273,21,0
chr10	24377863	.	G	GGTGTGTGTGTGTGTGT	4926.38	PASS	AB=1.000;AC=40;AF=0.769;AN=52;BaseQRankSum=1.983;DP=452;FS=25.528;HRun=0;HaplotypeScore=176.5318;InbreedingCoeff=0.4595;MQ=59.99;MQ0=4;MQRankSum=-1.173;QD=14.97;ReadPosRankSum=1.504;VQSLOD=2.4537;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:17,0:14:0:0,0,0	1/1:4,0:4:3.01:50,3,0	0/0:33,0:21:14.32:0,14,572	0/0:40,0:23:25.68:0,26,684	1/1:23,0:22:6.02:98,6,0	0/0:18,1:18:0.47:0,0,1	1/1:12,0:12:2.98:173,3,0	1/1:29,0:29:39.02:551,39,0	./.	1/1:23,0:20:18.05:716,18,0	0/0:14,0:12:0:0,0,0	1/1:12,1:13:1.72:4,2,0	1/1:8,0:8:9.02:307,9,0	1/1:21,0:20:9.02:388,9,0	0/1:21,0:20:0:0,0,0	1/1:15,1:17:6.49:260,6,0	1/1:5,4:9:9.03:468,9,0	0/1:5,0:5:0:0,0,0	1/1:12,0:11:9.03:344,9,0	1/1:11,0:10:3.01:50,3,0	1/1:6,0:6:3.01:49,3,0	1/1:10,0:10:3:26,3,0	0/1:16,0:16:0:0,0,0	./.	1/1:22,0:22:6.01:76,6,0	1/1:18,0:16:20.66:777,21,0	1/1:17,1:15:11.53:576,12,0	1/1:7,0:7:2.80:13,3,0
chr10	24377886	.	GAGAGAGAC	G	303.93	PASS	AB=1.000;AC=14;AF=0.467;AN=30;BaseQRankSum=0.216;DP=248;FS=2.927;HRun=0;HaplotypeScore=67.3226;InbreedingCoeff=0.2427;MQ=53.02;MQ0=13;MQRankSum=-0.280;QD=4.68;ReadPosRankSum=-0.681;VQSLOD=0.8869;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:30,0:15:3.02:0,3,274	0/0:45,0:15:18.05:0,18,405	1/1:12,0:10:2.92:17,3,0	./.	./.	0/0:22,0:21:21.99:0,22,591	1/1:2,1:3:2.94:18,3,0	0/0:7,0:4:9.03:0,9,115	./.	1/1:8,0:8:3.01:45,3,0	0/1:5,0:4:2.47:8,0,2	0/0:9,1:9:0.99:0,1,3	./.	0/1:12,0:11:8.52:9,0,51	0/0:3,0:3:1.82:0,2,5	./.	1/1:4,1:5:8.93:125,9,0	./.	./.	./.	./.	./.	./.	0/1:9,0:7:48.91:84,0,49	0/1:9,0:6:2.47:66,0,2	1/1:2,0:2:3.01:44,3,0
chr10	24377888	.	GAGAGAC	G	560.65	PASS	AB=0.946;AC=18;AF=0.600;AN=30;BaseQRankSum=1.980;DP=260;FS=0.000;HRun=0;HaplotypeScore=65.9419;InbreedingCoeff=0.2495;MQ=49.07;MQ0=15;MQRankSum=-0.134;QD=6.52;ReadPosRankSum=-1.203;VQSLOD=1.4934;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:31,0:14:4.18:0,4,170	0/0:48,0:14:6.02:0,6,191	1/1:9,1:9:2.92:17,3,0	./.	./.	0/0:23,0:21:28.29:0,28,334	1/1:2,0:2:2.94:18,3,0	0/1:8,0:5:4.20:29,0,4	./.	1/1:5,3:8:3.01:63,3,0	0/1:6,1:6:11.18:23,0,11	0/1:9,1:9:0:0,0,0	./.	0/1:13,0:12:9.99:10,0,17	0/0:3,0:3:2.50:0,2,9	./.	1/1:5,0:5:2.99:61,3,0	./.	./.	./.	./.	./.	./.	1/1:8,2:7:13.72:204,14,0	1/1:10,1:7:10.15:183,10,0	1/1:0,2:2:3.01:64,3,0
chr10	24377890	.	GAGAC	G	539.83	PASS	AB=1.000;AC=19;AF=0.633;AN=30;BaseQRankSum=2.621;DP=272;FS=3.251;HRun=0;HaplotypeScore=62.3505;InbreedingCoeff=0.2123;MQ=42.56;MQ0=19;MQRankSum=-0.934;QD=5.05;ReadPosRankSum=1.333;VQSLOD=1.6447;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:32,0:12:18.52:0,19,223	0/0:48,0:12:14.96:0,15,244	1/1:11,1:10:2.92:17,3,0	./.	./.	0/1:24,0:22:63.12:63,0,146	1/1:4,0:4:2.79:18,3,0	0/1:8,0:5:7.18:45,0,7	./.	1/1:11,0:9:3.01:45,3,0	1/1:7,0:6:4.22:29,4,0	0/0:10,0:9:1.25:0,1,3	./.	1/1:11,1:11:1.87:16,2,0	0/0:4,0:4:2.37:0,2,8	./.	0/1:7,0:6:25.24:25,0,56	./.	./.	./.	./.	./.	./.	1/1:9,0:6:17.17:187,17,0	1/1:10,1:8:13.55:163,14,0	1/1:2,0:2:3.01:45,3,0
chr10	24377892	.	GAC	G	408.99	PASS	AB=0.987;AC=21;AF=0.656;AN=32;BaseQRankSum=4.296;DP=270;FS=1.229;HRun=0;HaplotypeScore=60.2995;InbreedingCoeff=0.3139;MQ=39.20;MQ0=19;MQRankSum=-1.065;QD=3.65;ReadPosRankSum=1.780;VQSLOD=1.6401;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:32,0:10:15.31:0,15,153	0/0:46,0:10:17.34:0,17,209	1/1:11,1:10:2.92:17,3,0	./.	0/0:4,1:5:0:0,0,0	0/1:23,1:22:1.65:2,0,139	1/1:5,0:5:5.87:37,6,0	0/1:7,0:5:24.60:62,0,25	./.	1/1:11,0:9:3:28,3,0	1/1:6,1:6:7.65:37,8,0	0/0:9,0:8:0.89:0,1,2	./.	1/1:12,0:11:8.48:45,8,0	1/1:4,0:4:1.82:5,2,0	./.	0/1:7,0:5:13.20:13,0,23	./.	./.	./.	./.	./.	./.	1/1:9,0:6:17.77:137,18,0	1/1:11,1:7:14.57:115,15,0	1/1:2,0:2:3:26,3,0
chr10	24377956	.	G	GAC	104.11	PASS	AB=0.961;AC=7;AF=0.184;AN=38;BaseQRankSum=-0.990;DP=377;FS=6.048;HRun=0;HaplotypeScore=57.8882;InbreedingCoeff=0.1158;MQ=30.61;MQ0=47;MQRankSum=1.567;QD=0.80;ReadPosRankSum=-2.949;VQSLOD=0.1957;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:10:0:0,0,0	0/1:2,0:2:0:0,0,0	0/0:40,0:4:5.02:0,5,90	0/1:82,0:16:12.27:12,0,100	./.	./.	0/0:9,0:8:0:0,0,0	0/1:17,5:12:99:167,0,115	0/0:10,3:13:12.25:0,12,131	0/0:14,0:8:18.05:0,18,254	./.	0/0:9,0:7:3.01:0,3,41	0/0:5,0:4:3.01:0,3,45	1/1:6,0:6:0.89:2,1,0	./.	0/0:14,0:10:5.53:0,6,52	0/0:7,1:7:2.08:0,2,15	0/0:6,0:2:3.01:0,3,44	0/0:14,0:9:20.63:0,21,230	0/1:11,0:10:0:0,0,0	./.	./.	./.	./.	./.	0/0:12,0:9:16.46:0,16,205	0/0:13,0:9:8.94:0,9,108	0/1:6,0:6:7.81:8,0,113
chr10	24377974	.	GAC	G	342.80	PASS	AB=0.722;AC=22;AF=0.579;AN=38;BaseQRankSum=1.786;DP=340;FS=12.493;HRun=0;HaplotypeScore=51.3125;InbreedingCoeff=0.1462;MQ=33.68;MQ0=49;MQRankSum=1.103;QD=1.64;ReadPosRankSum=0.860;VQSLOD=0.2412;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:6,4:8:0:0,0,0	1/1:1,1:2:0.47:1,0,0	0/0:45,0:7:10.94:0,11,117	0/1:79,0:16:6.39:6,0,75	./.	./.	0/1:4,4:6:0:0,0,0	0/0:17,0:5:3.01:0,3,55	0/0:9,4:13:9.34:0,9,95	0/1:5,8:7:2.89:135,0,3	./.	./.	1/1:3,2:4:0.47:1,0,0	0/1:2,3:4:0:0,0,0	0/1:6,7:10:0:0,0,0	1/1:9,5:10:2.22:7,2,0	0/0:6,1:6:1.55:0,2,4	1/1:6,1:3:0.29:41,0,0	0/1:11,2:8:13.01:13,0,88	1/1:12,4:11:2.04:6,2,0	./.	./.	./.	./.	./.	0/1:3,4:5:40.80:120,0,41	1/1:8,3:7:5.94:42,6,0	1/1:4,2:6:0.45:70,0,0
chr10	24377984	.	CAT	C	136.82	PASS	AB=0.949;AC=22;AF=0.647;AN=34;BaseQRankSum=2.945;DP=318;FS=8.202;HRun=0;HaplotypeScore=40.8502;InbreedingCoeff=0.0719;MQ=33.68;MQ0=50;MQRankSum=0.529;QD=0.71;ReadPosRankSum=0.717;VQSLOD=-0.1518;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:9,1:7:0:0,0,0	1/1:2,0:2:0.47:1,0,0	0/0:52,0:6:14.79:0,15,190	0/1:81,0:17:1.79:2,0,22	./.	./.	0/1:6,0:4:0:0,0,0	./.	0/0:10,0:10:2.31:0,2,13	1/1:9,2:6:7.03:30,7,0	./.	./.	1/1:3,0:2:0.47:1,0,0	./.	0/1:12,0:9:0:0,0,0	1/1:9,0:6:3.01:43,3,0	1/1:4,2:5:2.84:15,3,0	0/1:6,0:4:6.32:30,0,6	0/1:8,2:3:9.61:25,0,10	1/1:13,3:10:1.25:3,1,0	./.	./.	./.	./.	./.	0/1:6,0:4:13.36:36,0,13	1/1:9,0:6:2.88:15,3,0	0/1:4,0:4:23.52:34,0,24
chr10	24378022	.	G	GAC	653.72	PASS	AB=0.937;AC=19;AF=0.452;AN=42;BaseQRankSum=-0.589;DP=335;FS=2.230;HRun=0;HaplotypeScore=36.3908;InbreedingCoeff=-0.0538;MQ=26.09;MQ0=63;MQRankSum=-0.604;QD=3.87;ReadPosRankSum=3.632;VQSLOD=1.0246;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:15:5.34:0,5,24	0/0:3,0:3:2.98:0,3,21	./.	0/0:18,0:2:0.89:0,1,2	0/1:13,0:11:23.36:23,0,36	./.	0/1:10,0:5:17.95:34,0,18	./.	0/0:6,0:5:2.96:0,3,19	0/1:19,0:11:12.12:142,0,12	0/1:11,0:10:10.06:10,0,40	0/0:11,0:8:3:0,3,25	1/1:8,1:3:3.40:17,3,0	0/1:8,1:8:11.97:29,0,12	./.	0/1:8,1:5:0:0,0,0	1/1:9,0:4:2.84:14,3,0	0/0:9,0:4:3.01:0,3,42	0/0:13,0:3:5.96:0,6,52	./.	./.	./.	1/1:8,0:6:8.96:68,9,0	1/1:19,0:14:2.95:20,3,0	0/1:15,0:14:32.66:33,0,64	0/1:13,2:13:76.76:179,0,77	1/1:15,1:10:14.95:166,15,0	0/1:4,1:4:4.42:44,0,4
chr10	24378054	.	G	GAC	266.74	PASS	AB=0.852;AC=5;AF=0.109;AN=46;BaseQRankSum=1.584;DP=517;FS=19.910;HRun=0;HaplotypeScore=78.9686;InbreedingCoeff=0.2970;MQ=29.76;MQ0=63;MQRankSum=-1.382;QD=4.94;ReadPosRankSum=0.265;VQSLOD=1.2074;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:19:6.01:0,6,92	0/0:3,0:3:2.97:0,3,45	./.	./.	0/0:27,0:23:21.07:0,21,319	0/0:14,0:10:3.01:0,3,46	0/0:24,0:15:8.91:0,9,111	./.	1/1:2,5:6:12.04:213,12,0	0/0:50,2:41:41.80:0,42,1038	0/0:22,1:22:18.06:0,18,285	0/0:18,0:13:9.03:0,9,136	0/0:19,0:11:9.76:0,10,110	0/0:14,0:12:14.62:0,15,227	0/1:16,2:14:0:0,0,0	0/1:13,4:13:39.85:52,0,40	0/0:10,1:6:0:0,0,0	0/1:9,2:5:28.22:106,0,28	0/0:13,0:4:6:0,6,68	./.	./.	0/0:26,0:21:9.02:0,9,116	0/0:23,0:16:12.04:0,12,183	0/0:27,0:19:15.03:0,15,208	0/0:19,1:20:25.95:0,26,411	0/0:33,1:27:14.55:0,15,806	0/0:26,0:18:21.02:0,21,283	0/0:7,0:5:8.92:0,9,108
chr10	24378116	.	CAGAG	C	1722.06	PASS	AB=0.869;AC=28;AF=0.560;AN=50;BaseQRankSum=-4.809;DP=739;FS=0.000;HRun=0;HaplotypeScore=94.2164;InbreedingCoeff=0.0465;MQ=27.97;MQ0=67;MQRankSum=2.972;QD=3.32;ReadPosRankSum=-1.592;VQSLOD=1.5570;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:22,3:12:3.01:57,3,0	0/0:7,5:11:11.78:0,12,211	./.	./.	1/1:34,16:48:6.01:82,6,0	1/1:14,2:12:6.01:82,6,0	0/0:28,1:14:5.93:0,6,94	0/0:50,0:2:2.97:0,3,20	1/1:10,0:5:0.47:1,0,0	0/1:50,7:47:99:294,0,1876	1/1:29,10:35:18.02:274,18,0	0/1:24,2:21:55.20:119,0,55	0/1:22,5:22:73.26:110,0,73	1/1:14,5:15:8.30:44,8,0	0/0:28,2:24:3:0,3,26	1/1:21,1:17:2.60:10,3,0	1/1:14,0:5:2.87:32,3,0	0/0:18,0:7:9.01:0,9,140	0/1:16,0:3:17.12:28,0,17	0/0:33,0:27:0.76:0,1,3	./.	1/1:33,7:35:6.02:114,6,0	0/0:26,9:26:3.01:0,3,81	1/1:30,6:21:12.04:209,12,0	0/1:30,8:35:13.98:14,0,92	0/1:40,5:33:99:263,0,896	0/1:24,6:22:74.24:74,0,173	0/1:5,3:6:64.91:65,0,69
chr10	24378120	.	GAGAC	G	873.90	PASS	AB=0.984;AC=27;AF=0.563;AN=48;BaseQRankSum=-2.720;DP=713;FS=0.000;HRun=0;HaplotypeScore=91.6385;InbreedingCoeff=0.0101;MQ=27.25;MQ0=66;MQRankSum=1.691;QD=1.90;ReadPosRankSum=-1.321;VQSLOD=1.5875;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:11:3.01:38,3,0	0/0:13,0:12:5.03:0,5,169	./.	./.	1/1:49,0:47:3.01:38,3,0	1/1:15,0:11:3.01:39,3,0	0/0:29,0:14:5.32:0,5,113	./.	1/1:6,2:2:2.96:19,3,0	0/1:54,1:47:99:108,0,1683	1/1:36,0:31:12.03:137,12,0	0/1:25,0:20:56.79:57,0,67	0/1:26,0:21:73.72:74,0,91	1/1:17,0:13:2.46:22,2,0	0/0:27,1:22:2.22:0,2,7	1/1:21,1:17:2.98:22,3,0	1/1:13,2:5:2.97:51,3,0	0/0:15,1:6:6.02:0,6,124	0/1:18,2:4:42.05:42,0,109	0/0:9,24:27:0.76:0,1,3	./.	1/1:38,0:33:6.02:65,6,0	0/0:32,0:24:3.01:0,3,81	1/1:34,0:20:12:112,12,0	0/0:38,0:35:3.01:0,3,51	0/1:41,0:31:99:130,0,913	0/1:29,0:22:36.15:36,0,179	0/1:8,0:6:26.95:27,0,75
chr10	24378158	.	GAC	G	229.29	PASS	AB=0.959;AC=9;AF=0.265;AN=34;BaseQRankSum=-1.716;DP=554;FS=1.105;HRun=0;HaplotypeScore=60.8858;InbreedingCoeff=-0.2525;MQ=26.22;MQ0=56;MQRankSum=-0.350;QD=1.26;ReadPosRankSum=-0.659;VQSLOD=1.4911;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,1:12:2.96:0,3,19	0/1:10,0:9:11.97:12,0,32	./.	./.	./.	./.	1/1:18,1:9:3.01:30,3,0	./.	./.	0/1:35,1:28:99:176,0,476	0/1:23,1:20:13.86:14,0,99	0/0:22,1:18:5.46:0,5,33	0/1:19,1:16:14.63:15,0,61	0/0:14,0:10:1.36:0,1,2	./.	./.	0/1:14,0:5:12.61:13,0,30	0/0:12,0:4:2.98:0,3,21	0/0:17,0:1:2.94:0,3,18	0/0:47,0:38:1.04:0,1,3	./.	./.	0/0:10,0:16:2.04:0,2,6	0/0:23,0:13:3.01:0,3,58	./.	0/1:27,2:21:35.87:36,0,355	0/1:27,1:23:38.10:38,0,105	0/0:5,0:4:5.88:0,6,48
chr10	24378166	.	GAGAGAC	G	1097.19	PASS	AB=0.926;AC=22;AF=0.846;AN=26;BaseQRankSum=-2.523;DP=496;FS=2.851;HRun=0;HaplotypeScore=64.7847;InbreedingCoeff=0.0191;MQ=26.25;MQ0=51;MQRankSum=0.255;QD=5.06;ReadPosRankSum=0.069;VQSLOD=1.3968;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	1/1:9,0:8:3.01:49,3,0	./.	./.	./.	./.	./.	./.	./.	1/1:31,2:26:14.79:149,15,0	1/1:17,2:16:3.01:30,3,0	0/1:19,4:18:23.83:86,0,24	1/1:16,3:14:11.96:132,12,0	1/1:13,1:10:4.57:67,5,0	./.	1/1:9,0:8:6.01:75,6,0	0/1:13,0:5:2.33:20,0,2	./.	./.	0/0:50,0:41:0.73:0,1,2	./.	./.	./.	1/1:17,0:12:2.96:19,3,0	./.	1/1:17,3:14:11.86:152,12,0	1/1:23,6:25:21.01:271,21,0	1/1:8,0:7:14.49:132,14,0
chr10	24378172	.	C	CAG	323.27	PASS	AB=0.995;AC=18;AF=0.500;AN=36;BaseQRankSum=-0.572;DP=474;FS=8.911;HRun=0;HaplotypeScore=63.0445;InbreedingCoeff=0.0898;MQ=27.39;MQ0=53;MQRankSum=0.791;QD=1.17;ReadPosRankSum=-0.986;VQSLOD=0.1315;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/1:7,0:7:0:0,0,0	./.	./.	0/0:24,0:24:0.47:0,0,1	./.	0/0:20,0:12:3.89:0,4,34	./.	0/0:3,0:2:2.60:0,3,10	0/1:28,0:18:10.21:10,0,100	1/1:20,0:17:2.99:24,3,0	0/1:21,1:18:12.24:12,0,39	1/1:22,0:14:1.48:4,1,0	1/1:16,0:12:8.19:53,8,0	1/1:20,0:18:0.47:1,0,0	0/1:9,0:8:0.01:0,0,0	0/1:13,0:5:5.18:5,0,62	./.	0/0:16,0:1:2.37:0,2,8	0/1:49,0:41:0.05:0,0,0	./.	./.	./.	1/1:16,4:14:5.97:62,6,0	./.	0/1:20,0:15:41.73:115,0,42	0/1:31,0:26:1.84:137,0,2	0/0:9,0:8:2.84:0,3,9
chr10	24378174	.	GAGAC	G	148.21	PASS	AB=0.933;AC=11;AF=0.289;AN=38;BaseQRankSum=3.165;DP=463;FS=1.185;HRun=0;HaplotypeScore=63.5425;InbreedingCoeff=0.0292;MQ=27.44;MQ0=52;MQRankSum=-0.457;QD=0.87;ReadPosRankSum=1.787;VQSLOD=1.4133;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	1/1:6,1:7:2.37:8,2,0	./.	./.	0/0:22,0:22:2.01:0,2,31	./.	0/0:19,0:12:5.91:0,6,61	./.	0/0:3,0:2:3:0,3,29	0/0:24,0:16:7.87:0,8,153	0/0:17,0:15:5.12:0,5,23	0/1:21,1:18:10.21:10,0,65	0/0:19,2:14:9.74:0,10,70	0/1:15,0:11:16.71:17,0,20	0/0:19,1:18:5.90:0,6,39	0/1:7,2:8:3.15:3,0,11	0/0:13,0:5:8.24:0,8,91	./.	1/1:18,0:1:1.55:4,2,0	1/1:50,0:42:3.85:12,4,0	./.	0/0:12,0:10:3.01:0,3,41	./.	0/0:20,1:15:8.86:0,9,74	./.	0/1:20,1:15:71.25:105,0,71	0/1:27,2:24:22.98:100,0,23	0/0:9,0:8:11.35:0,11,78
chr10	24378214	.	GAGAGACAGAC	G	309.78	PASS	AB=0.984;AC=10;AF=0.217;AN=46;BaseQRankSum=-0.320;DP=447;FS=1.193;HRun=0;HaplotypeScore=88.3153;InbreedingCoeff=0.2041;MQ=30.72;MQ0=44;MQRankSum=-1.936;QD=3.10;ReadPosRankSum=-4.095;VQSLOD=0.3204;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/0:3,0:3:3.01:0,3,54	./.	./.	0/0:19,0:18:11.15:0,11,370	0/0:15,0:14:0:0,0,0	0/0:17,0:12:3.01:0,3,37	0/0:26,0:1:3.01:0,3,54	1/1:4,4:6:4.34:143,4,0	0/0:23,0:16:13.99:0,14,659	0/0:14,0:13:6.02:0,6,141	0/0:23,0:20:15.03:0,15,298	0/0:23,0:17:3.43:0,3,389	0/1:14,0:12:3.38:3,0,185	0/0:18,0:17:6.02:0,6,154	0/0:15,0:14:13.76:0,14,269	0/1:7,0:4:11.47:63,0,11	1/1:9,0:7:3.80:112,4,0	./.	1/1:20,9:26:5.38:88,5,0	0/0:17,0:10:1.15:0,1,3	0/0:10,0:8:3.01:0,3,85	./.	0/1:16,0:12:8.98:9,0,256	0/0:16,0:14:3.01:0,3,89	0/0:25,0:17:32.57:0,33,718	0/0:33,0:28:32.23:0,32,678	0/1:15,0:14:10.88:11,0,554
chr10	24378220	.	CAGACAG	C	173.76	PASS	AB=0.903;AC=7;AF=0.146;AN=48;BaseQRankSum=4.788;DP=491;FS=1.644;HRun=0;HaplotypeScore=84.3704;InbreedingCoeff=0.1782;MQ=30.80;MQ0=39;MQRankSum=-2.761;QD=2.09;ReadPosRankSum=-0.608;VQSLOD=1.5561;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/0:3,0:3:3.01:0,3,49	./.	./.	0/0:22,0:20:12.01:0,12,319	0/0:18,0:15:2.99:0,3,24	0/0:18,0:13:3.01:0,3,37	0/0:31,0:2:2.96:0,3,20	0/1:12,0:10:29.18:31,0,29	0/0:24,0:18:44.81:0,45,738	0/0:13,0:12:6.02:0,6,119	0/0:24,0:21:18.05:0,18,275	0/1:23,0:16:2.54:3,0,316	0/0:16,0:15:4.54:0,5,195	0/0:20,0:19:6.02:0,6,138	0/0:17,0:16:14.33:0,14,211	1/1:8,0:6:5.81:65,6,0	0/1:6,3:7:61.49:148,0,61	0/0:11,0:3:5.90:0,6,39	1/1:28,0:26:3.01:38,3,0	0/0:13,4:10:0.37:0,0,1	0/0:10,0:9:3.01:0,3,80	./.	0/0:20,0:14:18.04:0,18,320	0/0:19,0:17:3.01:0,3,80	0/0:26,0:18:34.62:0,35,672	0/0:37,0:32:41.42:0,41,645	0/0:17,0:16:30.10:0,30,549
chr10	24378240	.	GAC	G	222.47	PASS	AB=0.922;AC=9;AF=0.188;AN=48;BaseQRankSum=3.255;DP=573;FS=0.000;HRun=0;HaplotypeScore=87.2118;InbreedingCoeff=-0.1126;MQ=30.91;MQ0=47;MQRankSum=-4.743;QD=1.28;ReadPosRankSum=-1.224;VQSLOD=1.4560;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	0/0:5,0:4:3.01:0,3,58	./.	./.	0/0:18,0:16:18.06:0,18,338	0/0:17,1:15:9:0,9,138	./.	0/0:42,0:1:3.01:0,3,50	0/0:10,6:11:1.29:0,1,91	0/1:31,3:25:48.22:48,0,843	0/0:18,1:16:12.04:0,12,231	0/0:26,2:24:18.06:0,18,321	0/1:26,1:18:34.47:34,0,263	0/1:20,3:20:23.14:23,0,209	0/0:23,1:23:6.02:0,6,115	0/1:24,1:23:24.16:24,0,296	0/1:10,0:6:1.31:1,0,49	0/1:11,1:10:29.89:30,0,156	0/1:12,4:6:42.58:168,0,43	1/1:19,8:24:2.07:13,2,0	0/0:14,6:13:1.14:0,1,3	0/0:20,2:17:3.01:0,3,58	0/0:12,0:9:3.01:0,3,57	0/0:28,2:20:21.07:0,21,399	0/0:20,1:18:9.03:0,9,171	0/0:31,0:20:38.80:0,39,645	0/0:40,0:33:45.13:0,45,780	0/0:14,2:15:39.08:0,39,665
chr10	24378254	.	CAG	C	2099.91	PASS	AB=0.780;AC=23;AF=0.500;AN=46;BaseQRankSum=-7.166;DP=625;FS=0.813;HRun=0;HaplotypeScore=88.1402;InbreedingCoeff=0.2007;MQ=30.11;MQ0=46;MQRankSum=2.853;QD=5.36;ReadPosRankSum=0.379;VQSLOD=2.4094;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	1/1:5,0:5:0.47:1,0,0	./.	./.	0/1:16,5:18:21.87:104,0,22	0/1:8,14:21:28.10:33,0,28	./.	0/0:40,0:1:2.99:0,3,23	0/0:20,0:13:8.96:0,9,120	0/1:28,7:26:99:368,0,282	0/0:13,4:16:6.02:0,6,67	1/1:8,16:22:9.03:117,9,0	1/1:13,12:20:16.77:168,17,0	1/1:12,8:20:6.49:79,6,0	./.	1/1:7,20:27:14.42:168,14,0	0/0:10,2:8:8.92:0,9,88	0/0:13,0:11:19.30:0,19,263	0/0:17,0:9:23.03:0,23,209	0/0:31,0:26:0.47:0,0,1	0/1:23,0:14:0.02:0,0,0	1/1:15,4:18:3.01:36,3,0	0/0:10,3:10:3.01:0,3,33	0/1:23,10:26:46.96:139,0,47	0/1:17,10:25:27.87:28,0,57	0/1:26,10:25:99:243,0,141	1/1:22,16:30:1.94:366,2,0	1/1:6,7:14:32.89:398,33,0
chr10	24378328	.	GAGAGAGAC	G	487.18	PASS	AB=1.000;AC=9;AF=0.180;AN=50;BaseQRankSum=2.313;DP=757;FS=0.000;HRun=0;HaplotypeScore=129.4073;InbreedingCoeff=0.7109;MQ=38.10;MQ0=35;MQRankSum=0.252;QD=5.13;ReadPosRankSum=-2.086;VQSLOD=1.7636;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:32:30.10:0,30,1009	0/0:7,0:7:14.82:0,15,514	./.	./.	0/0:27,0:27:15.05:0,15,594	0/0:28,0:27:33.11:0,33,1173	0/0:19,0:15:23.94:0,24,831	0/0:75,0:30:69.03:0,69,1573	0/0:6,12:14:0:0,0,0	0/0:57,0:52:99:0,135,3807	0/0:30,0:29:26.84:0,27,843	0/0:28,0:22:42.73:0,43,1418	0/0:29,0:26:56.77:0,57,1840	0/0:19,0:18:24.08:0,24,793	0/0:27,0:25:36.12:0,36,1363	0/1:29,0:30:13.05:13,0,1713	./.	1/1:10,0:9:12.03:216,12,0	1/1:11,6:7:12.03:268,12,0	1/1:16,5:16:2.71:47,3,0	1/1:17,0:10:3.01:79,3,0	0/0:38,0:35:47.66:0,48,1588	0/0:22,0:21:21.07:0,21,630	0/0:42,0:36:42.12:0,42,1516	0/0:21,0:21:21.07:0,21,457	0/0:30,0:27:67.47:0,67,2012	0/0:36,0:35:63.21:0,63,2080	0/0:24,0:23:57.20:0,57,2089
chr10	24378334	.	GAC	G	188.20	PASS	AB=0.909;AC=7;AF=0.135;AN=52;BaseQRankSum=5.011;DP=742;FS=2.199;HRun=0;HaplotypeScore=87.2679;InbreedingCoeff=0.6784;MQ=38.99;MQ0=34;MQRankSum=-0.335;QD=2.99;ReadPosRankSum=-2.788;VQSLOD=1.1727;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:31:33.10:0,33,592	0/0:11,0:10:24.03:0,24,360	0/0:8,0:1:2.92:0,3,17	./.	0/0:27,0:27:15.05:0,15,289	0/0:28,0:27:33.09:0,33,636	0/0:20,0:16:27.04:0,27,486	0/0:69,0:27:70.98:0,71,1245	0/0:15,0:12:0:0,0,0	0/0:56,0:50:99:0,150,2508	0/0:29,0:28:29.72:0,30,541	0/0:27,0:22:42.62:0,43,772	0/0:32,0:29:59.38:0,59,1001	0/0:17,0:16:24.08:0,24,451	0/0:30,0:27:35.39:0,35,693	0/0:27,1:28:5.65:0,6,839	./.	1/1:10,1:10:15.92:168,16,0	1/1:15,0:6:11.76:97,12,0	0/1:18,2:17:9.01:37,0,9	1/1:8,9:12:2.90:16,3,0	0/0:39,0:35:47.43:0,47,909	0/0:21,0:18:24.07:0,24,426	0/0:40,0:35:48.06:0,48,849	0/0:21,0:21:26.96:0,27,375	0/0:29,0:26:65.78:0,66,1237	0/0:37,0:34:63.22:0,63,1207	0/0:22,0:21:57.19:0,57,1067
chr10	24380839	.	C	CTT	2894.69	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-4.528;DP=592;FS=2.558;HRun=10;HaplotypeScore=74.5159;InbreedingCoeff=0.9874;MQ=74.58;MQ0=0;MQRankSum=1.031;QD=22.44;ReadPosRankSum=-1.698;VQSLOD=2.9675;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:64.39:0,64,659	0/0:8,0:9:23.75:0,24,219	0/0:17,0:17:25.30:0,25,233	0/0:13,0:12:17.78:0,18,150	0/0:30,0:34:68.10:0,68,702	0/0:28,0:28:72.14:0,72,732	0/0:13,0:13:33.05:0,33,336	1/1:2,1:26:57.26:268,57,0	1/1:5,16:21:39.13:579,39,0	0/0:34,0:34:81.07:0,81,823	0/0:31,0:31:90.18:0,90,908	0/0:20,0:21:56.86:0,57,561	0/0:19,0:19:45.09:0,45,457	0/0:22,0:22:63.12:0,63,640	0/0:25,0:25:63.12:0,63,640	0/0:15,0:15:36.03:0,36,353	1/1:1,16:18:29.59:411,30,0	1/1:5,5:10:15.05:224,15,0	1/1:8,13:22:14.12:558,14,0	1/1:4,20:26:65.12:845,65,0	1/1:0,5:6:15.04:206,15,0	0/0:18,0:18:51.10:0,51,512	0/0:23,0:24:68.87:0,69,683	0/0:15,0:15:42.08:0,42,426	0/0:24,0:24:63.09:0,63,633	0/0:29,0:29:66.06:0,66,665	0/0:37,0:37:81.04:0,81,815	0/0:7,0:7:21.05:0,21,214
chr10	24390448	.	A	AT	11347.72	PASS	AB=0.601;AC=48;AF=0.857;AN=56;BaseQRankSum=-4.513;DP=552;FS=3.285;HRun=9;HaplotypeScore=60.7655;InbreedingCoeff=0.6583;MQ=64.09;MQ0=5;MQRankSum=-2.690;QD=24.14;ReadPosRankSum=5.927;VQSLOD=5.1604;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,28:31:81.69:896,82,0	1/1:0,10:10:30.08:332,30,0	0/0:22,0:10:19.14:0,19,159	0/0:18,0:12:13.16:0,13,162	1/1:6,24:30:72.19:794,72,0	1/1:1,11:12:4.02:273,4,0	0/1:5,9:14:24.29:206,0,24	0/0:42,0:42:99:0,103,881	1/1:0,6:6:12.03:133,12,0	1/1:6,22:28:72.01:768,72,0	1/1:4,18:22:31.09:566,31,0	1/1:3,6:9:15.04:164,15,0	1/1:4,13:17:36.09:393,36,0	1/1:5,11:16:42.11:459,42,0	1/1:0,24:24:66.18:730,66,0	1/1:4,7:10:15.04:166,15,0	1/1:7,23:29:61.41:664,61,0	1/1:3,15:18:35.82:397,36,0	1/1:8,10:18:38.94:409,39,0	1/1:3,25:28:46.14:735,46,0	1/1:0,5:5:15.02:153,15,0	0/1:5,11:16:7.78:235,0,8	1/1:6,16:22:45.12:498,45,0	1/1:4,12:16:27.07:299,27,0	1/1:4,26:30:75.20:829,75,0	1/1:5,23:28:63.17:697,63,0	1/1:1,16:18:41.81:445,42,0	1/1:1,7:8:11.52:108,12,0
chr10	24390625	.	A	AAACAACAACAAC	29008.49	PASS	AB=1.000;AC=51;AF=0.911;AN=56;BaseQRankSum=-3.610;DP=543;FS=3.564;HRun=0;HaplotypeScore=154.3382;InbreedingCoeff=0.6646;MQ=64.08;MQ0=5;MQRankSum=-1.263;QD=58.96;ReadPosRankSum=2.750;VQSLOD=4.2728;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,0:23:27.09:862,27,0	1/1:2,4:7:6.02:350,6,0	0/0:25,0:20:6.02:0,6,115	0/1:19,0:17:6.57:7,0,92	1/1:21,10:33:42.14:1665,42,0	1/1:5,7:12:24.08:1324,24,0	1/1:17,6:23:42.14:1859,42,0	0/0:15,0:25:15.52:0,16,267	1/1:4,0:14:18.06:943,18,0	1/1:8,13:22:42.09:1440,42,0	1/1:6,13:20:33.11:1491,33,0	1/1:10,7:18:30.10:1700,30,0	1/1:12,16:33:39.13:2135,39,0	1/1:11,9:26:30.10:1599,30,0	1/1:10,11:23:36.59:2024,37,0	1/1:7,7:15:18.06:1036,18,0	1/1:18,0:20:39.11:1083,39,0	1/1:10,4:16:6.02:242,6,0	1/1:11,0:19:26.26:764,26,0	1/1:11,0:20:29.96:1212,30,0	1/1:17,0:17:20.98:729,21,0	1/1:2,6:8:11.83:363,12,0	1/1:5,6:11:21.07:1165,21,0	1/1:11,7:21:24.08:1090,24,0	1/1:13,2:16:33.10:996,33,0	1/1:12,10:23:38.79:1570,39,0	1/1:11,5:17:12.04:672,12,0	1/1:8,3:11:12.04:688,12,0
chr10	24390911	.	CT	C	537.85	PASS	AB=0.875;AC=3;AF=0.054;AN=56;BaseQRankSum=0.861;DP=539;FS=8.271;HRun=10;HaplotypeScore=87.8909;InbreedingCoeff=0.5169;MQ=77.96;MQ0=2;MQRankSum=0.499;QD=14.54;ReadPosRankSum=-2.294;VQSLOD=2.9278;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:63.17:0,63,688	0/0:9,0:9:18.93:0,19,200	0/0:29,0:22:24.75:0,25,271	0/0:18,0:13:8.81:0,9,134	0/0:34,0:34:81.44:0,81,823	0/0:19,0:19:42.06:0,42,438	0/0:13,0:13:10.09:0,10,234	1/1:5,25:30:75.71:623,76,0	0/0:10,0:10:30.07:0,30,324	0/0:27,0:27:69.16:0,69,741	0/0:26,0:27:65.71:0,66,666	0/0:13,0:13:2:0,2,177	0/0:14,0:14:22.41:0,22,233	0/0:20,0:20:34.25:0,34,334	0/0:16,0:16:36.10:0,36,394	0/0:17,0:17:30.04:0,30,313	0/0:27,0:27:30.02:0,30,594	0/0:15,0:14:24.02:0,24,250	0/0:21,0:21:45.05:0,45,468	0/0:19,0:19:34.19:0,34,413	0/0:11,0:11:30.01:0,30,306	0/0:6,0:6:15.04:0,15,164	0/0:18,0:18:42.04:0,42,439	0/0:11,0:11:27.07:0,27,296	0/0:20,0:20:32.45:0,32,332	0/0:28,0:28:70.07:0,70,713	0/0:31,0:31:63.12:0,63,667	0/1:6,1:7:20.48:20,0,84
chr10	24390922	.	A	AT	7368.51	PASS	AB=0.657;AC=47;AF=0.839;AN=56;BaseQRankSum=-7.843;DP=560;FS=3.247;HRun=10;HaplotypeScore=68.9429;InbreedingCoeff=0.3895;MQ=71.75;MQ0=6;MQRankSum=0.076;QD=14.17;ReadPosRankSum=2.105;VQSLOD=5.2295;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,22:27:45.11:479,45,0	0/1:2,7:9:3.58:166,0,4	0/0:23,0:16:9.29:0,9,37	0/0:17,0:12:7.07:0,7,36	1/1:10,25:35:41.27:601,41,0	0/1:5,14:20:34.72:263,0,35	1/1:5,7:12:24.04:244,24,0	0/1:30,0:29:0.14:0,0,83	1/1:4,7:12:14.91:143,15,0	1/1:8,18:26:32.48:539,32,0	1/1:6,24:29:34.97:518,35,0	1/1:4,5:9:12.02:121,12,0	1/1:0,17:17:33.07:338,33,0	0/1:6,14:20:3.64:156,0,4	1/1:4,12:16:24.06:256,24,0	1/1:2,11:13:21.05:224,21,0	1/1:6,27:33:54.09:553,54,0	1/1:6,14:19:24.06:255,24,0	1/1:11,6:23:37.31:318,37,0	1/1:11,12:23:2.36:205,2,0	1/1:4,9:14:11.20:154,11,0	1/1:3,4:7:15:148,15,0	1/1:7,11:18:12.96:312,13,0	0/1:2,7:9:0.58:200,0,1	1/1:5,20:25:9.79:181,10,0	1/1:11,16:28:50.50:477,50,0	1/1:6,27:33:40.43:445,40,0	1/1:2,5:8:5.40:74,5,0
chr10	24391110	.	AACACACAC	A	13054.20	PASS	AB=0.775;AC=46;AF=0.821;AN=56;BaseQRankSum=-2.838;DP=652;FS=10.184;HRun=0;HaplotypeScore=161.7824;InbreedingCoeff=0.4343;MQ=52.00;MQ0=17;MQRankSum=-2.714;QD=23.02;ReadPosRankSum=2.165;VQSLOD=3.9921;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:37:34.78:0,35,377	1/1:4,4:8:9.03:209,9,0	0/0:18,0:9:5.83:0,6,33	0/0:28,0:15:7.94:0,8,130	1/1:8,19:27:50.87:750,51,0	1/1:6,20:26:23.78:564,24,0	1/1:9,9:20:15.05:289,15,0	1/1:31,0:30:10.71:550,11,0	0/1:7,13:20:68.09:641,0,68	1/1:1,13:14:38.52:597,39,0	1/1:6,16:22:39.05:809,39,0	1/1:5,16:21:32.09:835,32,0	1/1:5,17:21:23.12:598,23,0	1/1:3,27:31:36.55:793,37,0	1/1:6,22:28:23.13:1065,23,0	1/1:10,19:29:24.02:601,24,0	1/1:11,25:36:11.91:253,12,0	0/1:19,1:20:41.61:210,0,42	0/1:10,0:8:0.88:179,0,1	1/1:12,13:25:29.89:374,30,0	1/1:8,20:28:12.93:230,13,0	1/1:5,9:12:17.91:291,18,0	1/1:6,15:22:19.30:449,19,0	0/1:13,11:24:30.43:268,0,30	1/1:7,12:19:18.06:443,18,0	1/1:7,24:30:70.02:1255,70,0	1/1:8,21:29:32.21:744,32,0	1/1:2,3:4:3.01:61,3,0
chr10	24396262	.	AGG	A	1781.88	PASS	AB=1.000;AC=42;AF=0.808;AN=52;BaseQRankSum=-0.940;DP=262;FS=1.230;HRun=3;HaplotypeScore=51.4197;InbreedingCoeff=0.1175;MQ=46.43;MQ0=25;MQRankSum=2.828;QD=7.71;ReadPosRankSum=1.444;VQSLOD=0.2989;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:14,0:10:3.84:99,0,4	./.	1/1:6,0:1:0.47:1,0,0	0/0:18,0:4:2.79:0,3,27	1/1:8,0:8:14.98:123,15,0	1/1:20,0:18:1.76:121,2,0	0/1:13,0:10:4.93:81,0,5	1/1:14,0:14:4.82:129,5,0	0/1:8,0:8:8.09:37,0,8	0/1:7,0:7:1.26:73,0,1	./.	1/1:11,0:11:0.74:70,1,0	1/1:16,0:15:25.52:218,26,0	1/1:21,0:21:1.82:125,2,0	1/1:4,11:15:2.94:19,3,0	1/1:7,0:6:14.27:144,14,0	0/0:4,0:2:0:0,0,0	1/1:3,0:3:5.94:41,6,0	1/1:7,0:4:5.93:51,6,0	1/1:3,0:3:3:25,3,0	1/1:7,0:4:2.92:20,3,0	1/1:6,0:5:8.59:60,9,0	1/1:4,0:4:0.46:1,0,0	1/1:11,0:9:5.31:47,5,0	0/0:5,0:5:0.47:0,0,1	1/1:22,0:21:9.14:256,9,0	1/1:5,0:4:9.45:85,9,0	1/1:3,0:3:8.86:60,9,0
chr10	24397521	.	T	TA	4957.27	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-13.832;DP=640;FS=1.548;HRun=8;HaplotypeScore=76.9762;InbreedingCoeff=0.9971;MQ=69.75;MQ0=0;MQRankSum=-0.686;QD=26.80;ReadPosRankSum=-1.643;VQSLOD=4.8595;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,38:41:99:1142,99,0	0/0:12,0:12:36.02:0,36,329	0/0:16,0:15:18.63:0,19,170	0/0:17,0:16:17.68:0,18,165	0/0:29,0:29:74.96:0,75,667	0/0:34,0:34:79.35:0,79,786	0/0:25,0:25:42.37:0,42,548	1/1:5,22:26:66.20:761,66,0	1/1:0,16:16:48.14:554,48,0	0/0:33,0:33:87.04:0,87,793	0/0:20,0:20:54.01:0,54,486	0/0:27,0:27:69.03:0,69,631	0/0:29,0:29:62.23:0,62,710	0/0:17,0:17:42.01:0,42,384	0/0:35,0:35:93.04:0,93,847	0/0:22,0:22:57.02:0,57,522	1/1:2,14:16:42.12:485,42,0	1/1:9,14:23:33.10:381,33,0	1/1:7,18:25:53.98:594,54,0	1/1:2,21:23:60.04:659,60,0	1/1:1,12:12:33.10:381,33,0	0/0:13,0:13:30.01:0,30,275	0/0:21,0:21:63.03:0,63,577	0/0:12,0:12:36.02:0,36,329	0/0:21,0:21:57.03:0,57,522	0/0:32,0:31:84.03:0,84,765	0/0:23,0:21:69.03:0,69,628	0/0:16,0:16:48.03:0,48,439
chr10	24398716	.	A	AT	24517.65	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-9.197;DP=688;FS=4.704;HRun=3;HaplotypeScore=57.1471;InbreedingCoeff=0.9833;MQ=86.91;MQ0=0;MQRankSum=-10.715;QD=38.13;ReadPosRankSum=6.015;VQSLOD=4.6730;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,25:25:69.23:966,69,0	1/1:0,8:8:24.08:336,24,0	0/0:20,0:20:54.09:0,54,604	0/0:25,0:25:69.17:0,69,781	1/1:1,31:32:93.31:1302,93,0	1/1:2,24:26:69.23:966,69,0	1/1:0,16:16:45.15:630,45,0	1/1:0,23:23:69.22:950,69,0	1/1:0,26:26:72.24:1008,72,0	1/1:0,24:24:69.22:950,69,0	1/1:1,21:22:60.20:840,60,0	1/1:0,27:27:78.26:1092,78,0	1/1:3,27:30:75.25:1050,75,0	1/1:3,20:23:63.20:868,63,0	1/1:1,32:33:87.29:1219,87,0	1/1:1,29:30:84.28:1176,84,0	1/1:1,27:28:72.24:1008,72,0	1/1:1,18:19:51.17:714,51,0	1/1:3,27:30:81.25:1099,81,0	1/1:0,29:29:81.18:1090,81,0	1/1:2,20:22:57.19:798,57,0	1/1:1,23:24:69.19:944,69,0	1/1:4,19:23:57.19:798,57,0	1/1:1,15:16:39.13:546,39,0	1/1:1,24:25:72.24:1008,72,0	1/1:1,30:31:90.26:1239,90,0	1/1:4,42:47:99:1749,126,0	1/1:0,4:4:12.04:168,12,0
chr10	24399032	.	AT	A	24210.48	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-1.379;DP=773;FS=9.407;HRun=4;HaplotypeScore=77.9785;InbreedingCoeff=0.9989;MQ=79.68;MQ0=0;MQRankSum=-9.848;QD=32.81;ReadPosRankSum=5.603;VQSLOD=4.8328;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,28:34:81.25:972,81,0	1/1:1,13:14:39.12:468,39,0	0/0:18,0:18:53.54:0,54,716	0/0:16,1:17:48.14:0,48,650	1/1:1,37:38:99:1260,105,0	1/1:1,26:27:75.23:900,75,0	1/1:1,25:26:63.06:756,63,0	1/1:3,27:30:81.21:948,81,0	1/1:3,23:26:63.19:756,63,0	1/1:0,28:28:84.26:1006,84,0	1/1:2,28:30:75.09:899,75,0	1/1:0,26:26:78.24:936,78,0	1/1:1,34:35:93.29:1116,93,0	1/1:2,25:27:75.23:900,75,0	1/1:1,29:30:84.26:1008,84,0	1/1:1,38:39:99:1368,114,0	1/1:1,25:26:75.23:900,75,0	1/1:0,14:14:39.12:468,39,0	1/1:3,21:24:63.17:740,63,0	1/1:0,41:41:99:1296,108,0	1/1:1,27:28:78.24:936,78,0	1/1:0,24:24:69.21:828,69,0	1/1:1,33:34:96.29:1152,96,0	1/1:1,21:22:63.19:756,63,0	1/1:0,38:38:99:1260,105,0	1/1:3,27:30:84.09:962,84,0	1/1:1,37:38:99:1332,111,0	1/1:1,8:9:24.07:288,24,0
chr10	24399518	.	A	ATGTGTGTG	9607.45	PASS	AB=0.810;AC=44;AF=0.880;AN=50;BaseQRankSum=0.189;DP=631;FS=0.000;HRun=0;HaplotypeScore=174.6058;InbreedingCoeff=0.1782;MQ=67.67;MQ0=4;MQRankSum=-1.616;QD=17.25;ReadPosRankSum=0.401;VQSLOD=4.0598;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:36,0:34:8.73:143,9,0	1/1:9,0:9:12.04:295,12,0	./.	0/0:34,0:27:3.01:0,3,32	1/1:19,0:20:16.30:215,16,0	1/1:13,2:23:12.01:300,12,0	1/1:26,8:35:8.47:296,8,0	0/1:27,0:27:17.84:18,0,319	1/1:11,6:18:24.08:831,24,0	1/1:31,0:30:37.37:976,37,0	1/1:14,0:16:6.02:134,6,0	1/1:15,1:17:18.06:447,18,0	0/1:16,0:22:3.59:298,0,4	1/1:13,7:22:11.69:491,12,0	1/1:10,2:12:5.42:245,5,0	1/1:11,2:24:15.94:569,16,0	1/1:18,6:26:12.04:461,12,0	1/1:14,6:24:27.08:867,27,0	1/1:20,0:19:18.05:445,18,0	1/1:16,1:18:18.06:457,18,0	0/1:23,0:34:59.74:60,0,69	0/1:12,7:21:0:0,0,0	./.	1/1:19,9:29:6.02:246,6,0	1/1:8,11:20:2.99:99,3,0	1/1:26,1:34:52.41:1216,52,0	1/1:6,8:17:15.05:501,15,0	./.
chr10	24399547	.	T	TGTGTGTGT	7169.87	PASS	AB=1.000;AC=42;AF=0.875;AN=48;BaseQRankSum=-0.232;DP=573;FS=1.314;HRun=0;HaplotypeScore=153.4459;InbreedingCoeff=0.3321;MQ=46.88;MQ0=10;MQRankSum=-1.216;QD=15.32;ReadPosRankSum=1.184;VQSLOD=3.9249;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:37,0:36:8.70:143,9,0	1/1:10,0:10:9.03:172,9,0	./.	0/0:22,0:8:3.01:0,3,32	1/1:19,0:18:16.30:215,16,0	1/1:20,0:20:12.04:300,12,0	1/1:34,0:34:8.75:248,9,0	0/0:22,0:22:17.10:0,17,338	1/1:13,0:13:17.84:608,18,0	1/1:16,0:15:13.86:259,14,0	1/1:12,0:12:8.96:152,9,0	1/1:19,0:19:18.06:446,18,0	0/1:24,0:24:9.61:59,0,10	1/1:16,0:16:12.01:492,12,0	1/1:11,0:11:2.71:122,3,0	1/1:26,0:26:15.05:507,15,0	1/1:28,0:28:21.07:830,21,0	1/1:23,0:23:27.07:811,27,0	1/1:21,0:20:9.02:188,9,0	1/1:11,0:11:15.05:335,15,0	0/1:30,0:30:59.74:60,0,69	./.	./.	1/1:35,0:34:2.85:123,3,0	1/1:22,0:22:2.99:99,3,0	1/1:27,0:27:37.36:703,37,0	1/1:14,0:14:9.03:300,9,0	./.
chr10	24399728	.	AT	A	425.31	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.946;DP=609;FS=8.440;HRun=7;HaplotypeScore=61.1975;InbreedingCoeff=0.9919;MQ=73.76;MQ0=0;MQRankSum=-1.445;QD=18.49;ReadPosRankSum=-2.984;VQSLOD=2.2894;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:81.23:0,81,1003	0/0:12,0:12:33.06:0,33,396	0/0:21,0:20:44.98:0,45,527	0/0:18,0:17:19.12:0,19,456	0/0:24,0:24:69.20:0,69,844	0/0:20,0:20:54.17:0,54,679	0/0:16,0:16:42.13:0,42,528	1/1:6,17:23:51.11:520,51,0	0/0:18,0:18:54.15:0,54,660	0/0:33,0:33:90.28:0,90,1120	0/0:15,0:15:45.14:0,45,566	0/0:35,0:35:87.27:0,87,1082	0/0:23,0:23:66.21:0,66,829	0/0:26,0:26:72.22:0,72,894	0/0:29,0:29:87.25:0,87,1068	0/0:24,0:24:69.22:0,69,867	0/0:26,0:26:78.25:0,78,980	0/0:12,0:12:30.10:0,30,375	0/0:23,0:23:66.20:0,66,819	0/0:21,0:21:60.19:0,60,754	0/0:20,0:20:60.18:0,60,740	0/0:19,0:19:51.14:0,51,616	0/0:21,0:21:57.18:0,57,717	0/0:17,0:17:48.15:0,48,604	0/0:21,0:21:57.17:0,57,706	0/0:30,0:30:78.25:0,78,981	0/0:24,0:24:69.22:0,69,867	0/0:9,0:9:27.09:0,27,339
chr10	24400171	.	C	CAA	5448.63	PASS	AB=0.899;AC=44;AF=0.786;AN=56;BaseQRankSum=2.893;DP=662;FS=2.840;HRun=17;HaplotypeScore=151.4390;InbreedingCoeff=0.2929;MQ=67.68;MQ0=0;MQRankSum=-3.109;QD=8.98;ReadPosRankSum=-4.295;VQSLOD=0.8128;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:33,0:33:51.89:332,52,0	1/1:10,0:10:16.50:103,17,0	0/0:23,0:11:7.97:0,8,50	0/0:16,0:13:2.52:0,3,17	1/1:17,0:37:35.90:313,36,0	1/1:22,0:22:53.12:412,53,0	1/1:5,7:12:11.88:97,12,0	0/1:27,12:40:10.46:331,0,10	0/1:18,0:23:2.22:2,0,60	1/1:26,0:27:34.84:258,35,0	1/1:11,7:17:15.91:125,16,0	1/1:24,0:24:46.32:370,46,0	1/1:34,0:33:60.03:476,60,0	1/1:16,0:15:28.27:232,28,0	1/1:23,0:23:44.95:360,45,0	1/1:25,0:24:42.68:301,43,0	0/1:19,0:26:32.67:33,0,36	0/1:16,0:18:61.74:62,0,69	0/1:16,0:20:23.11:23,0,75	0/1:19,0:26:25.08:25,0,101	0/0:14,0:16:7.20:0,7,51	1/1:13,0:13:24.79:198,25,0	1/1:30,0:30:48.75:272,49,0	1/1:6,0:19:3:29,3,0	1/1:10,15:26:22.26:149,22,0	1/1:13,0:33:58.74:429,59,0	1/1:32,0:32:58.74:428,59,0	1/1:8,1:17:9.48:91,9,0
chr10	24403340	.	TC	T	1097.34	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=11.872;DP=505;FS=15.465;HRun=2;HaplotypeScore=64.6574;InbreedingCoeff=0.9223;MQ=87.78;MQ0=0;MQRankSum=-11.459;QD=19.60;ReadPosRankSum=2.849;VQSLOD=2.3934;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:30.08:0,30,454	0/0:4,0:4:12.04:0,12,192	0/0:23,0:23:66.22:0,66,1039	0/0:18,0:18:48.01:0,48,659	0/0:35,0:35:99:0,99,1536	0/0:24,0:24:72.23:0,72,1124	0/0:14,0:14:42.14:0,42,671	0/0:35,0:35:99:0,105,1651	1/1:1,13:14:41.88:332,42,0	0/0:24,0:24:72.23:0,72,1127	0/0:16,0:16:48.15:0,48,736	0/0:21,0:21:63.20:0,63,984	0/0:24,0:24:72.21:0,72,1093	0/0:23,0:23:69.24:0,69,1096	0/0:27,0:27:81.28:0,81,1295	0/0:24,0:24:72.21:0,72,1083	1/1:1,2:3:8.95:69,9,0	1/1:1,1:2:3.88:26,4,0	1/1:0,12:12:35.96:302,36,0	1/1:0,20:20:56.83:450,57,0	1/1:1,4:5:11.96:94,12,0	0/0:17,0:17:48.16:0,48,767	0/0:15,0:15:45.15:0,45,719	0/0:14,0:14:42.14:0,42,671	0/0:25,0:25:75.21:0,75,1121	0/0:29,0:29:87.30:0,87,1390	0/0:23,0:23:63.21:0,63,1007	0/0:2,0:2:6:0,6,72
chr10	24403343	.	ATGTG	A	1995.48	PASS	AB=0.667;AC=11;AF=0.196;AN=56;BaseQRankSum=11.760;DP=507;FS=12.480;HRun=0;HaplotypeScore=92.8311;InbreedingCoeff=0.8538;MQ=87.32;MQ0=0;MQRankSum=-11.727;QD=36.95;ReadPosRankSum=3.610;VQSLOD=3.3808;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:33.11:0,33,932	0/0:5,0:5:15.05:0,15,433	0/0:23,0:23:66.22:0,66,1716	0/0:16,0:16:45.15:0,45,1252	0/0:36,0:36:99:0,108,3126	0/0:24,0:24:72.25:0,72,2043	0/0:14,0:14:42.14:0,42,1217	0/0:38,0:38:99:0,114,3224	1/1:0,13:13:39.13:544,39,0	0/0:24,0:24:72.24:0,72,1992	0/0:16,0:16:48.16:0,48,1391	0/0:21,0:21:63.20:0,63,1764	0/0:22,0:22:66.23:0,66,1818	0/0:22,0:22:66.23:0,66,1911	0/0:28,0:28:84.29:0,84,2433	0/0:24,0:24:72.25:0,72,2086	1/1:0,2:2:6.02:86,6,0	0/1:1,1:2:11.53:36,0,12	1/1:1,11:12:36.11:502,36,0	1/1:0,20:20:60.20:833,60,0	1/1:1,4:5:12.04:167,12,0	0/0:17,0:17:51.18:0,51,1475	0/0:16,0:16:48.16:0,48,1377	0/0:14,0:14:42.14:0,42,1217	0/0:23,0:23:66.22:0,66,1851	0/0:30,0:30:90.31:0,90,2565	0/0:24,0:24:72.25:0,72,2034	0/0:4,0:4:12.04:0,12,342
chr10	24404379	.	GATATATAT	G	1506.77	PASS	AB=0.909;AC=31;AF=0.738;AN=42;BaseQRankSum=-0.103;DP=209;FS=1.931;HRun=0;HaplotypeScore=60.1636;InbreedingCoeff=0.2689;MQ=69.66;MQ0=8;MQRankSum=0.804;QD=13.10;ReadPosRankSum=3.526;VQSLOD=1.6849;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:9,0:6:0.47:0,0,1	0/0:13,0:5:3.74:0,4,12	0/0:5,0:5:3:0,3,25	./.	1/1:5,0:5:3:25,3,0	0/0:10,0:10:9.03:0,9,227	1/1:6,0:7:3.01:56,3,0	1/1:5,5:10:15.05:309,15,0	1/1:7,0:7:3.01:66,3,0	./.	1/1:5,0:5:3.01:66,3,0	1/1:1,0:1:3.01:66,3,0	1/1:4,0:4:3.01:66,3,0	1/1:4,0:4:6.02:152,6,0	1/1:10,0:9:3.01:56,3,0	1/1:3,0:7:6.02:113,6,0	1/1:14,0:20:9.03:168,9,0	0/0:25,0:26:0:0,0,0	./.	./.	1/1:7,0:7:3.01:30,3,0	./.	0/1:9,1:10:24.33:112,0,24	1/1:1,4:5:12.02:232,12,0	1/1:2,0:2:3.01:67,3,0	1/1:8,0:9:3.01:36,3,0
chr10	24404392	.	ATATATATATATATATATATATG	A	1283.57	PASS	AC=10;AF=0.185;AN=54;BaseQRankSum=-0.038;DP=160;FS=11.665;HRun=0;HaplotypeScore=70.9226;InbreedingCoeff=0.4750;MQ=57.58;MQ0=10;MQRankSum=-4.279;QD=26.20;ReadPosRankSum=0.699;VQSLOD=0.7129;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:2,0:1:3.01:0,3,46	0/0:1,0:1:0:0,0,0	0/0:6,0:3:0.47:0,0,1	0/0:11,0:3:8.94:0,9,87	0/0:4,0:4:12.03:0,12,415	0/0:8,0:8:3.01:0,3,73	0/0:1,0:1:3.01:0,3,124	0/0:4,0:4:12.03:0,12,618	1/1:2,9:11:2.84:184,3,0	0/0:8,0:8:24.08:0,24,780	0/0:5,0:4:12.04:0,12,327	./.	0/0:1,0:1:3.01:0,3,63	0/0:1,0:1:3:0,3,27	0/0:2,0:2:3.01:0,3,34	0/0:3,0:3:1.74:0,2,204	1/1:2,6:7:3.01:185,3,0	1/1:6,0:6:11.97:379,12,0	1/1:13,0:13:18.06:622,18,0	0/0:4,19:23:0.47:0,0,1	1/1:11,0:9:3.01:48,3,0	0/0:2,0:2:6:0,6,51	0/0:2,0:2:6.01:0,6,191	0/0:1,0:1:3:0,3,25	0/0:7,0:7:12.04:0,12,494	0/0:4,0:4:12.04:0,12,236	0/0:7,0:7:14.36:0,14,727	0/0:8,0:6:9.03:0,9,301
chr10	24406768	.	CT	C	274.75	PASS	AC=2;AF=0.100;AN=20;BaseQRankSum=4.150;DP=116;FS=7.906;HRun=4;HaplotypeScore=30.4606;InbreedingCoeff=0.7943;MQ=131.85;MQ0=0;MQRankSum=-3.015;QD=27.48;ReadPosRankSum=1.722;VQSLOD=1.9600;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,10:10:30.09:360,30,0	./.	0/0:18,0:18:42.11:0,42,537	0/0:9,0:9:23.98:0,24,255	./.	./.	./.	0/0:29,0:29:78.24:0,78,1061	0/0:5,0:5:15.05:0,15,210	./.	./.	./.	./.	./.	./.	./.	0/0:13,0:12:39.10:0,39,511	0/0:1,0:1:2.97:0,3,20	0/0:6,0:6:18.05:0,18,223	0/0:21,0:21:63.18:0,63,848	0/0:4,0:4:12.04:0,12,168	./.	./.	./.	./.	./.	./.	./.
chr10	24407188	.	A	ATACT	8570.76	PASS	AC=16;AF=0.800;AN=20;BaseQRankSum=-2.619;DP=142;FS=3.802;HRun=0;HaplotypeScore=73.1137;InbreedingCoeff=0.9156;MQ=99.33;MQ0=1;MQRankSum=-6.085;QD=69.12;ReadPosRankSum=2.007;VQSLOD=7.2844;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,10:10:24.08:627,24,0	./.	0/0:12,0:12:33.11:0,33,610	0/0:6,0:6:5.14:0,5,207	./.	./.	./.	1/1:11,32:44:99:3125,126,0	1/1:5,6:11:30.10:769,30,0	./.	./.	./.	./.	./.	./.	./.	1/1:2,11:13:26.70:958,27,0	1/1:1,10:11:30.10:808,30,0	1/1:3,8:11:30.10:747,30,0	1/1:1,13:14:39.13:1051,39,0	1/1:2,7:9:18.06:486,18,0	./.	./.	./.	./.	./.	./.	./.
chr10	24407330	.	T	TA	74.95	PASS	AC=10;AF=0.333;AN=30;BaseQRankSum=4.189;DP=201;FS=23.709;HRun=0;HaplotypeScore=48.7121;InbreedingCoeff=0.7711;MQ=114.57;MQ0=0;MQRankSum=-2.952;QD=6.81;ReadPosRankSum=-4.074;VQSLOD=1.1152;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:31.64:0,32,405	1/1:0,1:1:3.01:32,3,0	0/0:16,0:16:45.13:0,45,610	0/0:18,0:18:52.80:0,53,577	1/1:1,3:4:3.01:32,3,0	./.	./.	0/0:39,0:39:99:0,114,1564	0/0:21,0:21:63.21:0,63,879	./.	./.	1/1:0,1:1:2.99:23,3,0	./.	1/1:0,2:2:6:54,6,0	./.	./.	0/0:17,0:17:38.71:0,39,542	0/0:14,0:14:42.05:0,42,543	0/0:18,0:18:54.18:0,54,754	0/0:11,0:11:33.05:0,33,422	0/0:19,0:19:54.17:0,54,738	1/1:0,3:3:5.99:53,6,0	./.	./.	./.	./.	./.	./.
chr10	24407613	.	A	ATGATGATGATGATG	8811.31	PASS	AB=1.000;AC=41;AF=0.788;AN=52;BaseQRankSum=6.759;DP=211;FS=11.018;HRun=0;HaplotypeScore=137.2331;InbreedingCoeff=0.3669;MQ=53.40;MQ0=2;MQRankSum=-6.215;QD=49.50;ReadPosRankSum=6.113;VQSLOD=3.2160;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:8,0:8:0.39:227,0,0	1/1:4,1:5:6.02:357,6,0	0/0:5,0:5:14.98:0,15,256	0/0:3,0:2:6.02:0,6,263	1/1:8,0:8:2.29:175,2,0	1/1:12,2:14:16.49:728,16,0	1/1:5,0:5:12.04:252,12,0	0/0:25,0:22:60.21:0,60,1695	1/1:7,0:7:6.12:175,6,0	1/1:4,0:4:11.99:236,12,0	1/1:3,0:3:3.01:54,3,0	1/1:14,2:16:36.07:901,36,0	1/1:9,2:11:9.95:902,10,0	1/1:6,1:7:12.04:333,12,0	1/1:12,0:12:16.08:236,16,0	1/1:11,3:14:28.91:991,29,0	0/1:5,0:5:20.62:115,0,21	0/1:5,0:5:91.51:92,0,94	1/1:9,0:9:23.75:442,24,0	1/1:6,0:6:6.02:119,6,0	0/1:5,0:5:0.60:1,0,14	./.	./.	1/1:4,0:4:9.03:284,9,0	1/1:4,0:4:12.04:468,12,0	0/1:6,0:6:6.64:376,0,7	1/1:13,2:15:39.12:1035,39,0	1/1:4,1:5:9.03:313,9,0
chr10	24407626	.	AT	A	1497.35	PASS	AB=0.738;AC=18;AF=0.391;AN=46;BaseQRankSum=-1.520;DP=184;FS=11.516;HRun=1;HaplotypeScore=97.0472;InbreedingCoeff=-0.1944;MQ=36.15;MQ0=2;MQRankSum=-2.769;QD=12.58;ReadPosRankSum=2.266;VQSLOD=1.3646;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:7:11.97:0,12,141	1/1:0,3:3:9.03:125,9,0	./.	./.	1/1:1,4:5:12:138,12,0	0/1:7,8:15:93.77:203,0,94	0/0:5,0:5:12.04:0,12,163	0/0:24,0:21:57.15:0,57,725	0/0:7,0:7:9.03:0,9,123	0/1:3,1:4:29.11:29,0,106	1/1:1,1:2:6.02:83,6,0	0/1:12,4:16:99:117,0,288	0/1:5,5:10:99:170,0,99	0/1:6,2:8:65.06:65,0,101	0/1:5,4:9:99:107,0,103	0/1:5,6:11:93.32:191,0,93	0/0:5,0:5:12.04:0,12,168	0/0:2,0:2:3.01:0,3,41	0/0:7,0:7:20.28:0,20,258	0/0:6,0:6:6.02:0,6,81	./.	./.	./.	0/1:3,1:4:32.59:33,0,72	0/1:2,2:4:68.21:71,0,68	0/1:4,2:6:68.72:69,0,94	0/1:10,6:16:99:176,0,300	0/1:5,1:6:70.70:71,0,74
chr10	24407821	.	T	TAATA	19198.13	PASS	AB=0.588;AC=47;AF=0.839;AN=56;BaseQRankSum=-0.771;DP=422;FS=13.092;HRun=0;HaplotypeScore=76.7575;InbreedingCoeff=0.8034;MQ=73.25;MQ0=0;MQRankSum=-7.543;QD=56.97;ReadPosRankSum=3.627;VQSLOD=5.4661;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:45.15:0,45,823	1/1:0,4:4:9.03:237,9,0	0/0:7,0:7:11.87:0,12,157	0/0:17,0:17:34.16:0,34,467	1/1:4,18:24:48.12:1128,48,0	1/1:0,19:20:48.16:1261,48,0	1/1:2,11:14:30.10:785,30,0	0/0:45,0:45:99:0,120,1985	1/1:0,15:16:36.12:949,36,0	1/1:2,7:11:27.07:567,27,0	1/1:2,13:16:45.15:1033,45,0	1/1:1,15:16:33.11:865,33,0	1/1:2,12:17:39.13:1016,39,0	1/1:1,16:17:27.09:711,27,0	1/1:1,13:15:30.10:773,30,0	1/1:0,14:15:39.13:1027,39,0	1/1:2,9:11:24.08:613,24,0	1/1:0,5:5:15.05:396,15,0	1/1:3,21:24:72.25:1769,72,0	1/1:1,16:17:48.16:1225,48,0	0/1:3,7:10:22.53:282,0,23	1/1:0,4:4:9.03:237,9,0	1/1:0,6:6:6.02:158,6,0	1/1:0,14:14:27.09:712,27,0	1/1:0,8:8:18.06:474,18,0	1/1:1,15:18:51.15:1213,51,0	1/1:1,17:21:45.15:1178,45,0	1/1:2,11:14:24.08:589,24,0
chr10	24409748	.	T	TAG	5329.17	PASS	AC=46;AF=0.885;AN=52;BaseQRankSum=3.550;DP=188;FS=17.196;HRun=0;HaplotypeScore=240.1924;InbreedingCoeff=0.5455;MQ=43.09;MQ0=0;MQRankSum=0.129;QD=29.94;ReadPosRankSum=2.856;VQSLOD=3.9425;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,1:1:3:28,3,0	1/1:1,3:4:11.69:96,12,0	0/0:2,0:2:0:0,0,0	0/0:1,0:1:0.47:0,0,1	1/1:0,12:12:36.05:363,36,0	1/1:0,11:11:33.07:333,33,0	1/1:0,3:3:9.02:87,9,0	0/0:0,6:6:11.88:0,12,45	1/1:1,9:10:30.06:299,30,0	1/1:0,8:8:24.07:288,24,0	1/1:0,13:13:39.03:357,39,0	1/1:0,10:10:30.05:291,30,0	1/1:0,8:8:24.01:218,24,0	1/1:0,11:11:33.01:305,33,0	1/1:0,6:6:18.04:179,18,0	1/1:0,12:12:36.07:361,36,0	1/1:0,1:1:3.01:30,3,0	1/1:0,2:2:6.02:74,6,0	1/1:0,3:3:9.03:110,9,0	1/1:1,10:11:32.80:310,33,0	./.	1/1:0,9:9:27.03:248,27,0	1/1:0,8:8:24.02:219,24,0	./.	1/1:0,13:13:39.08:390,39,0	1/1:0,8:8:24.07:279,24,0	1/1:0,13:13:39.08:435,39,0	1/1:0,1:1:3.01:32,3,0
chr10	24410597	.	C	CCTT	33885.45	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=1.840;DP=749;FS=3.175;HRun=0;HaplotypeScore=133.8581;InbreedingCoeff=0.9952;MQ=50.96;MQ0=12;MQRankSum=-2.363;QD=54.13;ReadPosRankSum=2.999;VQSLOD=6.6389;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,123,1991	1/1:1,10:11:33.11:743,33,0	0/0:24,0:12:30.10:0,30,496	0/0:23,0:11:33.11:0,33,543	1/1:3,24:27:63.15:1345,63,0	1/1:2,20:23:63.17:1366,63,0	1/1:5,18:23:63.10:1242,63,0	0/0:30,0:29:75.25:0,75,1226	1/1:6,34:42:99:2147,102,0	1/1:2,14:17:45.14:974,45,0	1/1:0,13:14:39.09:805,39,0	1/1:3,34:38:99:2155,99,0	1/1:5,45:52:99:2984,138,0	1/1:0,33:35:87.30:1953,87,0	1/1:2,26:28:71.98:1562,72,0	1/1:3,34:38:99:2269,102,0	1/1:1,20:21:54.18:1193,54,0	1/1:5,24:29:55.66:1450,56,0	1/1:2,23:23:66.11:1284,66,0	1/1:3,22:25:72.20:1551,72,0	1/1:7,19:27:57.08:1166,57,0	1/1:4,14:19:48.16:978,48,0	1/1:5,16:21:39.06:801,39,0	1/1:4,22:26:57.20:1275,57,0	1/1:2,14:16:39.09:809,39,0	1/1:3,17:21:50.77:1126,51,0	1/1:5,35:41:99:2368,108,0	1/1:0,5:5:15.05:340,15,0
chr10	24412308	.	T	TA	14193.29	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-5.015;DP=588;FS=0.968;HRun=8;HaplotypeScore=65.4515;InbreedingCoeff=0.9819;MQ=62.84;MQ0=0;MQRankSum=-1.532;QD=28.50;ReadPosRankSum=4.717;VQSLOD=4.8629;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,111,1009	1/1:1,12:13:30.09:345,30,0	0/0:7,0:7:20.79:0,21,161	0/0:9,0:8:14.92:0,15,123	1/1:5,25:30:68.32:794,68,0	1/1:3,22:25:60.18:691,60,0	1/1:2,9:11:27.08:312,27,0	0/0:31,0:31:75.02:0,75,683	1/1:3,11:14:30.09:345,30,0	1/1:1,30:32:93.28:1071,93,0	1/1:1,17:18:45.06:490,45,0	1/1:1,20:21:57.17:658,57,0	1/1:3,25:28:41.74:733,42,0	1/1:3,28:31:87.20:986,87,0	1/1:0,24:24:66.20:760,66,0	1/1:4,18:22:57.17:652,57,0	1/1:1,24:25:57.17:658,57,0	1/1:3,14:17:17.78:457,18,0	1/1:7,15:22:42.12:484,42,0	1/1:5,22:28:66.03:740,66,0	1/1:2,4:6:12.04:138,12,0	1/1:0,27:27:75.22:860,75,0	1/1:3,18:21:48.09:539,48,0	1/1:0,10:10:27.08:311,27,0	1/1:0,21:21:51.15:587,51,0	1/1:0,12:12:36.09:406,36,0	1/1:0,31:31:78.09:900,78,0	1/1:1,8:9:24.07:276,24,0
chr10	24412599	.	T	TTA	1378.25	PASS	AB=1.000;AC=42;AF=0.955;AN=44;BaseQRankSum=-4.282;DP=77;FS=8.785;HRun=0;HaplotypeScore=12.9785;InbreedingCoeff=-0.1950;MQ=124.90;MQ0=0;MQRankSum=-4.440;QD=18.88;ReadPosRankSum=-3.044;VQSLOD=1.1597;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,0:3:2.97:20,3,0	1/1:1,0:1:3.01:60,3,0	0/1:9,0:9:14.11:14,0,169	0/1:7,0:8:66.84:67,0,115	1/1:1,0:1:2.97:20,3,0	./.	./.	1/1:2,0:2:6.01:70,6,0	1/1:0,4:5:3.01:60,3,0	1/1:5,0:5:9.01:112,9,0	./.	1/1:4,0:4:3:25,3,0	1/1:0,3:4:3.01:60,3,0	1/1:2,0:2:3.01:60,3,0	1/1:1,0:1:3:25,3,0	1/1:1,0:1:3.01:59,3,0	./.	1/1:5,0:5:2.97:20,3,0	1/1:0,3:4:12.04:231,12,0	./.	1/1:3,0:3:9.03:175,9,0	1/1:5,0:5:6.02:116,6,0	1/1:0,4:4:3.01:60,3,0	1/1:1,0:1:3.01:55,3,0	1/1:2,0:2:3.01:58,3,0	1/1:2,0:2:3.01:44,3,0	1/1:0,1:1:3.01:60,3,0	./.
chr10	24413172	.	AG	A	18262.86	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=9.568;DP=674;FS=2.230;HRun=3;HaplotypeScore=96.5702;InbreedingCoeff=0.9979;MQ=82.94;MQ0=0;MQRankSum=-6.545;QD=32.85;ReadPosRankSum=8.060;VQSLOD=3.8917;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:63.18:0,63,867	1/1:0,7:7:21.07:260,21,0	0/0:32,0:32:93.30:0,93,1312	0/0:16,0:16:39.13:0,39,561	1/1:1,34:35:87.22:1045,87,0	1/1:1,32:33:90.22:1095,90,0	1/1:0,16:16:39.12:483,39,0	0/0:47,0:47:99:0,135,1864	1/1:2,13:15:39.12:483,39,0	1/1:0,27:27:81.24:992,81,0	1/1:1,30:31:81.25:1002,81,0	1/1:0,30:30:81.21:985,81,0	1/1:1,27:28:78.19:946,78,0	1/1:3,18:21:51.16:631,51,0	1/1:1,31:32:84.26:1039,84,0	1/1:1,22:23:63.20:780,63,0	1/1:0,10:10:27.08:335,27,0	1/1:0,21:21:57.18:706,57,0	1/1:0,19:19:57.18:706,57,0	1/1:0,30:30:81.25:1001,81,0	1/1:0,23:23:57.18:706,57,0	1/1:0,23:23:60.15:725,60,0	1/1:2,24:26:63.20:780,63,0	1/1:0,14:14:33.10:408,33,0	1/1:1,21:22:60.19:743,60,0	1/1:1,33:34:99:1185,99,0	1/1:0,27:27:75.24:929,75,0	1/1:0,9:9:24.08:297,24,0
chr10	24414991	.	T	TA	153.63	PASS	AB=0.885;AC=4;AF=0.071;AN=56;BaseQRankSum=-1.441;DP=267;FS=2.645;HRun=10;HaplotypeScore=28.1486;InbreedingCoeff=0.2067;MQ=67.22;MQ0=3;MQRankSum=-0.082;QD=4.66;ReadPosRankSum=0.937;VQSLOD=-0.4006;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,7:9:21.05:223,21,0	0/0:2,0:2:3:0,3,25	0/0:16,0:8:13.92:0,14,89	0/0:11,0:7:4.09:0,4,84	0/0:5,0:5:11.98:0,12,98	0/0:10,0:10:29.96:0,30,244	0/1:6,1:7:20:20,0,62	0/0:40,0:41:79.71:0,80,641	0/0:8,0:8:20.97:0,21,170	0/0:1,0:1:3:0,3,25	0/0:2,0:2:3:0,3,25	0/0:7,0:7:17.98:0,18,148	0/0:15,0:15:29.95:0,30,246	0/0:12,0:12:35.95:0,36,293	0/0:4,0:4:5.99:0,6,49	0/0:5,0:5:11.98:0,12,99	0/0:20,0:20:49.35:0,49,416	0/0:15,0:15:41.77:0,42,344	0/0:16,0:16:32.93:0,33,271	0/0:3,0:3:5.99:0,6,49	0/0:3,0:3:8.99:0,9,74	0/0:1,0:1:2.99:0,3,24	0/0:4,0:4:8.99:0,9,74	0/0:13,0:13:23.93:0,24,197	0/0:8,0:8:17.92:0,18,141	0/0:9,0:9:17.97:0,18,148	0/0:3,0:3:5.99:0,6,49	0/1:15,2:17:22.03:22,0,253
chr10	24415225	.	TTA	T	788.75	PASS	AB=1.000;AC=36;AF=0.783;AN=46;BaseQRankSum=1.947;DP=153;FS=14.022;HRun=0;HaplotypeScore=43.7891;InbreedingCoeff=0.4237;MQ=92.08;MQ0=5;MQRankSum=-1.745;QD=10.66;ReadPosRankSum=3.395;VQSLOD=1.6028;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:3,0:3:6.02:0,6,99	1/1:3,0:5:11.28:53,11,0	1/1:13,0:4:0.16:0,0,0	0/0:43,0:21:10.67:0,11,96	1/1:1,0:2:5.68:27,6,0	0/1:2,0:2:5.39:7,0,5	1/1:2,0:2:5.54:25,6,0	0/0:22,0:26:38.60:0,39,409	1/1:0,1:1:3.01:37,3,0	1/1:2,0:2:3.27:14,3,0	1/1:1,0:1:2.84:14,3,0	./.	0/0:2,0:3:2.55:0,3,11	./.	1/1:2,0:2:5.60:26,6,0	0/1:3,0:3:7.02:7,0,10	1/1:3,5:8:12:132,12,0	1/1:3,5:8:18.02:208,18,0	1/1:0,4:4:12.04:147,12,0	./.	1/1:1,1:2:6.02:75,6,0	1/1:1,0:1:2.80:13,3,0	./.	1/1:1,0:1:2.84:14,3,0	1/1:6,0:6:5.60:26,6,0	./.	1/1:1,0:3:5.59:26,6,0	1/1:6,0:8:16.37:72,16,0
chr10	24415236	.	TA	T	744.67	PASS	AB=0.757;AC=30;AF=0.600;AN=50;BaseQRankSum=0.425;DP=165;FS=4.465;HRun=1;HaplotypeScore=46.6262;InbreedingCoeff=0.3749;MQ=81.67;MQ0=6;MQRankSum=-0.951;QD=7.37;ReadPosRankSum=3.061;VQSLOD=1.0366;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:3,0:3:6.02:0,6,96	1/1:2,3:5:9.61:87,10,0	0/1:14,0:4:0.16:0,0,0	0/1:42,2:18:15.07:15,0,109	0/1:1,3:4:24.47:33,0,24	1/1:0,2:2:5.50:47,6,0	1/1:0,2:2:6.02:76,6,0	0/0:30,0:30:84.37:0,84,792	0/0:1,0:1:0.47:0,0,1	0/1:0,3:3:13.68:35,0,14	1/1:0,1:1:3.01:39,3,0	./.	1/1:3,0:3:5.83:37,6,0	./.	1/1:1,2:3:6.02:77,6,0	1/1:2,1:3:5.88:54,6,0	0/0:9,0:8:6.27:0,6,54	0/0:10,0:10:13.11:0,13,95	0/0:5,0:5:6.17:0,6,16	1/1:1,0:1:0.89:2,1,0	0/0:2,0:2:0.94:0,1,3	1/1:0,1:1:3.01:38,3,0	./.	1/1:0,1:1:3.01:39,3,0	1/1:1,2:3:9.02:103,9,0	0/0:2,1:2:5.98:0,6,47	1/1:2,2:4:7.53:62,8,0	1/1:3,4:7:10.10:152,10,0
chr10	24415239	.	ATTAG	A	1137.78	PASS	AB=0.970;AC=31;AF=0.596;AN=52;BaseQRankSum=1.484;DP=165;FS=2.902;HRun=0;HaplotypeScore=48.9180;InbreedingCoeff=-0.0792;MQ=79.63;MQ0=6;MQRankSum=-2.728;QD=10.25;ReadPosRankSum=1.512;VQSLOD=1.8598;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:3,0:3:6.02:0,6,142	0/1:6,0:6:33:33,0,34	1/1:14,0:4:0.20:1,0,0	0/0:41,0:16:7.30:0,7,85	0/1:4,0:4:9.86:10,0,57	0/1:3,0:3:13.31:13,0,74	1/1:2,0:2:5.95:42,6,0	0/1:15,14:29:99:788,0,440	1/1:1,0:1:1.82:5,2,0	0/1:3,0:3:12.04:12,0,31	1/1:1,0:1:2.99:23,3,0	./.	0/0:2,0:2:2.04:0,2,6	./.	1/1:3,0:3:6.85:46,7,0	0/1:3,0:3:0.60:18,0,1	0/1:9,0:8:9.63:10,0,46	0/1:10,0:10:12.16:12,0,50	0/1:5,0:5:9.88:10,0,12	1/1:1,0:1:3.01:34,3,0	0/0:2,0:2:0.44:0,0,3	1/1:1,0:1:2.98:22,3,0	1/1:1,0:1:1.25:3,1,0	1/1:1,0:1:2.98:22,3,0	1/1:3,0:3:8.97:70,9,0	0/0:4,0:3:4.75:0,5,106	0/1:4,0:4:12.18:12,0,36	0/1:7,0:7:3.83:89,0,4
chr10	24415242	.	AG	A	990.81	PASS	AB=0.750;AC=35;AF=0.673;AN=52;BaseQRankSum=0.703;DP=162;FS=4.166;HRun=1;HaplotypeScore=42.4634;InbreedingCoeff=-0.0561;MQ=77.87;MQ0=5;MQRankSum=-2.240;QD=9.17;ReadPosRankSum=2.947;VQSLOD=1.4926;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:3,0:3:6.02:0,6,95	0/1:3,3:6:14.69:86,0,15	0/1:14,0:4:0.02:0,0,0	0/0:40,1:16:15.18:0,15,139	0/1:1,3:4:27.38:27,0,30	0/1:1,2:3:38.90:39,0,39	1/1:0,2:2:6.02:76,6,0	0/1:26,1:27:99:167,0,317	1/1:1,0:1:2.22:7,2,0	0/1:0,3:3:8.96:35,0,9	1/1:0,1:1:3.01:39,3,0	./.	1/1:2,0:2:2.84:14,3,0	./.	1/1:2,2:4:9.03:107,9,0	1/1:2,1:3:5.88:54,6,0	0/1:8,0:7:14.30:14,0,29	0/0:9,0:9:6.94:0,7,104	0/1:5,0:5:0.60:1,0,17	1/1:1,0:1:2.90:16,3,0	1/1:2,0:2:5.30:25,5,0	1/1:0,1:1:3.01:38,3,0	1/1:0,1:1:2.99:24,3,0	1/1:0,1:1:3.01:39,3,0	1/1:0,3:3:9.02:103,9,0	0/1:2,2:3:12.02:12,0,56	0/1:2,2:4:8.92:32,0,9	0/1:3,5:8:24.08:181,0,24
chr10	24415243	.	G	GTATA	1831.49	PASS	AB=1.000;AC=45;AF=0.900;AN=50;BaseQRankSum=0.203;DP=171;FS=2.071;HRun=0;HaplotypeScore=47.6865;InbreedingCoeff=0.0589;MQ=76.66;MQ0=5;MQRankSum=-2.398;QD=14.54;ReadPosRankSum=0.179;VQSLOD=2.6714;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	1/1:5,0:5:7.99:32,8,0	1/1:14,0:4:0.46:1,0,0	0/0:41,0:16:2.35:0,2,40	1/1:4,0:4:8.09:34,8,0	0/1:3,0:3:13.88:14,0,42	1/1:2,0:2:5.19:20,5,0	1/1:27,0:28:21.82:269,22,0	1/1:2,1:3:3.01:74,3,0	1/1:3,0:3:8.27:36,8,0	1/1:1,0:1:2.50:9,2,0	./.	1/1:1,0:3:2.80:13,3,0	./.	1/1:3,0:5:7.99:32,8,0	1/1:1,0:3:5.24:22,5,0	1/1:6,3:9:12.04:277,12,0	1/1:2,7:9:21.07:523,21,0	1/1:1,4:5:12.04:299,12,0	1/1:1,1:2:3.01:73,3,0	1/1:2,0:2:5.81:53,6,0	1/1:1,0:1:2.60:10,3,0	1/1:1,0:1:2.80:13,3,0	1/1:1,0:1:2.50:9,2,0	1/1:3,0:3:8.09:45,8,0	0/1:5,0:4:16.81:17,0,42	1/1:4,0:4:5.39:23,5,0	0/1:9,0:9:37.45:45,0,37
chr10	24416712	.	AAG	A	15033.94	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=14.729;DP=560;FS=0.732;HRun=0;HaplotypeScore=68.6770;InbreedingCoeff=0.9992;MQ=78.43;MQ0=2;MQRankSum=-1.238;QD=38.95;ReadPosRankSum=5.655;VQSLOD=6.6485;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:75.26:0,75,1387	1/1:0,11:11:24.08:353,24,0	0/0:13,0:14:38.87:0,39,596	0/0:12,0:12:36.09:0,36,588	1/1:0,24:24:66.18:947,66,0	1/1:0,29:28:78.26:1148,78,0	1/1:1,18:18:48.16:707,48,0	0/0:27,0:27:69.24:0,69,1251	0/0:12,0:12:36.11:0,36,643	1/1:2,14:16:42.14:618,42,0	1/1:1,22:23:63.17:904,63,0	1/1:0,28:28:78.26:1149,78,0	1/1:1,22:23:60.20:884,60,0	1/1:0,28:27:81.27:1193,81,0	1/1:1,23:24:57.19:839,57,0	1/1:0,18:18:48.16:707,48,0	0/0:21,0:21:60.21:0,60,1110	0/0:9,0:9:24.08:0,24,449	0/0:18,0:18:51.17:0,51,906	0/0:17,0:17:48.15:0,48,852	0/0:17,0:17:51.17:0,51,925	1/1:0,17:17:45.11:638,45,0	1/1:0,22:22:60.20:883,60,0	1/1:0,14:14:33.11:486,33,0	1/1:1,18:18:45.15:663,45,0	1/1:0,28:28:84.28:1237,84,0	1/1:3,30:33:84.28:1236,84,0	1/1:0,10:10:30.10:442,30,0
chr10	24417048	.	GA	G	1175.49	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.601;DP=610;FS=3.335;HRun=9;HaplotypeScore=62.2527;InbreedingCoeff=0.9762;MQ=76.37;MQ0=0;MQRankSum=-1.799;QD=21.77;ReadPosRankSum=-4.236;VQSLOD=2.6753;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:2,18:20:50.25:446,50,0	0/0:5,0:5:15.04:0,15,173	0/0:20,0:20:46.91:0,47,491	0/0:12,0:12:13.69:0,14,272	0/0:37,0:37:96.27:0,96,1090	0/0:19,0:19:54.14:0,54,612	0/0:12,0:12:27.08:0,27,312	1/1:3,31:34:93.05:851,93,0	0/0:16,0:16:37.24:0,37,498	0/0:17,0:17:51.15:0,51,589	0/0:30,0:30:78.20:0,78,872	0/0:19,0:19:51.15:0,51,589	0/0:27,0:27:66.17:0,66,749	0/0:17,0:17:45.13:0,45,519	0/0:35,0:35:96.28:0,96,1100	0/0:20,0:20:57.17:0,57,658	0/0:10,0:10:27:0,27,293	0/0:15,0:15:30.52:0,31,337	0/0:17,0:18:20.54:0,21,462	0/0:32,0:32:84.22:0,84,949	0/0:12,0:12:30.08:0,30,337	0/0:24,0:24:63.19:0,63,727	0/0:31,0:31:87.22:0,87,976	0/0:19,0:19:51.15:0,51,589	0/0:29,0:29:78.21:0,78,883	0/0:33,0:33:93.27:0,93,1066	0/0:39,0:39:99:0,117,1335	0/0:8,0:8:24.07:0,24,277
chr10	24417346	.	C	CT	18220.65	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=2.311;DP=596;FS=0.000;HRun=6;HaplotypeScore=122.5687;InbreedingCoeff=0.9372;MQ=74.25;MQ0=0;MQRankSum=-6.175;QD=31.63;ReadPosRankSum=4.111;VQSLOD=3.1179;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,18:19:42.13:513,42,0	1/1:0,6:6:18.06:226,18,0	0/0:11,0:11:30.05:0,30,298	0/0:9,0:9:6.45:0,6,144	1/1:2,36:38:99:1337,108,0	1/1:0,31:31:81.26:1019,81,0	1/1:2,10:12:27.09:340,27,0	1/1:7,24:31:58.16:814,58,0	1/1:1,10:11:24.08:302,24,0	1/1:2,28:30:81.25:1004,81,0	1/1:3,15:18:45.10:544,45,0	1/1:2,21:23:60.19:755,60,0	1/1:2,29:31:81.26:1012,81,0	1/1:1,24:25:72.23:905,72,0	1/1:2,21:23:51.16:642,51,0	1/1:0,22:22:63.20:793,63,0	1/1:0,12:12:27.09:340,27,0	1/1:4,10:14:21.28:265,21,0	1/1:1,22:23:66.19:804,66,0	1/1:2,25:27:75.24:941,75,0	1/1:4,18:22:27.97:562,28,0	1/1:1,18:19:54.16:664,54,0	1/1:2,33:35:84.27:1057,84,0	1/1:0,10:10:24.08:302,24,0	1/1:4,25:29:66.21:830,66,0	1/1:1,22:23:63.19:779,63,0	1/1:0,34:34:93.30:1170,93,0	1/1:0,8:8:24.08:302,24,0
chr10	24419750	.	GT	G	15564.50	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-2.780;DP=669;FS=10.311;HRun=7;HaplotypeScore=69.3386;InbreedingCoeff=0.9979;MQ=80.41;MQ0=0;MQRankSum=-7.987;QD=25.52;ReadPosRankSum=6.236;VQSLOD=4.5641;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:36.55:0,37,210	1/1:2,16:18:39.09:398,39,0	0/0:20,0:20:41.31:0,41,543	0/0:23,0:21:56.48:0,56,630	1/1:2,35:37:96.21:979,96,0	1/1:3,23:26:57.13:581,57,0	1/1:1,19:20:54.12:551,54,0	1/1:7,36:43:99:1057,108,0	1/1:2,18:20:48.11:489,48,0	1/1:4,26:30:78.12:774,78,0	1/1:4,34:38:99:1040,102,0	1/1:1,24:25:57.13:581,57,0	1/1:3,21:24:57.13:581,57,0	1/1:0,19:20:53.15:526,53,0	1/1:2,18:20:48.10:490,48,0	1/1:1,16:17:42.09:428,42,0	1/1:1,22:23:57.13:581,57,0	1/1:0,13:13:36.08:365,36,0	1/1:1,17:18:48.09:482,48,0	1/1:3,33:36:96.21:979,96,0	1/1:0,11:11:30.07:306,30,0	1/1:2,14:16:32.78:336,33,0	1/1:2,28:30:72.08:734,72,0	1/1:4,12:16:30.06:306,30,0	1/1:3,29:32:81.18:826,81,0	1/1:2,37:39:99:1132,111,0	1/1:1,30:31:81.18:826,81,0	1/1:0,7:7:21.05:214,21,0
chr10	24421611	.	A	AC	8462.75	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-10.830;DP=554;FS=9.146;HRun=7;HaplotypeScore=58.0677;InbreedingCoeff=0.9766;MQ=59.62;MQ0=6;MQRankSum=3.880;QD=26.78;ReadPosRankSum=3.094;VQSLOD=5.4029;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,99,948	1/1:1,6:7:12.04:145,12,0	0/0:32,0:22:50.98:0,51,479	0/0:24,0:21:54.42:0,54,486	1/1:1,14:15:45.13:536,45,0	1/1:4,10:14:20.93:253,21,0	1/1:3,14:17:39.05:453,39,0	0/0:24,0:23:54.08:0,54,521	0/0:7,0:7:14.97:0,15,135	1/1:4,12:16:33.10:399,33,0	1/1:2,13:15:36.10:420,36,0	1/1:2,18:20:42.13:503,42,0	1/1:4,23:27:57.16:670,57,0	1/1:6,33:39:67.33:1076,67,0	1/1:2,20:22:54.15:641,54,0	1/1:1,20:21:54.17:652,54,0	0/0:34,0:34:99:0,99,948	0/0:24,0:24:66.10:0,66,637	0/0:13,0:12:30.04:0,30,290	0/0:14,0:14:33.05:0,33,318	0/0:28,0:28:72.10:0,72,690	1/1:1,5:6:12.04:145,12,0	1/1:2,8:10:21.06:253,21,0	1/1:1,12:14:29.06:393,29,0	1/1:2,20:22:51.16:616,51,0	1/1:4,21:25:60.18:722,60,0	1/1:4,17:21:16.17:478,16,0	1/1:0,5:5:9.03:109,9,0
chr10	24424499	.	A	ATGTGTGTG	9511.31	PASS	AB=0.968;AC=43;AF=0.768;AN=56;BaseQRankSum=-5.277;DP=765;FS=11.000;HRun=0;HaplotypeScore=228.5240;InbreedingCoeff=0.3129;MQ=53.39;MQ0=32;MQRankSum=2.200;QD=15.15;ReadPosRankSum=0.140;VQSLOD=2.8215;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:35,0:35:14.79:203,15,0	1/1:11,1:11:11.96:213,12,0	0/0:48,0:29:6.02:0,6,73	0/0:56,0:36:3:0,3,65	1/1:26,4:27:14.50:256,15,0	1/1:23,3:26:14:380,14,0	1/1:18,3:20:26.91:597,27,0	0/1:36,0:34:21.63:304,0,22	0/1:26,0:26:30.36:30,0,63	1/1:29,1:29:30.50:546,30,0	1/1:22,2:24:12.01:157,12,0	1/1:27,4:30:33.52:827,34,0	1/1:25,2:28:42.12:953,42,0	0/1:25,0:30:48.55:194,0,49	1/1:23,8:29:21.07:672,21,0	1/1:29,5:34:42.09:1213,42,0	0/0:14,0:14:4.41:0,4,71	0/1:11,0:11:33.10:33,0,68	0/1:20,0:19:42.52:70,0,43	0/0:18,0:18:4.05:0,4,13	1/1:25,0:23:0.94:1,1,0	1/1:26,2:25:12:157,12,0	1/1:17,3:19:6:79,6,0	1/1:35,0:33:18.04:285,18,0	1/1:17,3:20:15.04:274,15,0	1/1:27,4:30:45.47:865,45,0	1/1:21,4:23:33.09:1055,33,0	1/1:4,0:4:12.02:149,12,0
chr10	24424520	.	TGTGTGTGTGTATGATGTG	T	4715.82	PASS	AB=0.993;AC=29;AF=0.518;AN=56;BaseQRankSum=-6.696;DP=806;FS=99.441;HRun=0;HaplotypeScore=311.6228;InbreedingCoeff=-0.5169;MQ=39.16;MQ0=99;MQRankSum=-3.595;QD=7.13;ReadPosRankSum=1.782;VQSLOD=-0.3029;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:38,0:36:14.65:207,15,0	0/1:11,0:10:99:220,0,131	0/0:60,0:3:6.02:0,6,124	0/0:77,0:12:8.98:0,9,241	0/1:26,0:23:99:150,0,558	0/1:27,0:26:36.71:37,0,595	0/1:27,0:25:99:194,0,955	0/1:35,0:33:99:259,0,1472	1/1:4,19:23:14.07:567,14,0	0/1:29,0:27:99:123,0,1186	0/1:22,0:22:91.23:91,0,348	0/1:35,0:33:99:272,0,1080	0/1:32,0:30:99:168,0,1277	0/1:29,0:27:99:101,0,527	0/1:31,0:29:99:202,0,381	0/1:29,0:28:99:372,0,366	0/1:14,1:15:2.58:312,0,3	0/1:11,0:12:99:298,0,113	1/1:18,0:14:15.07:264,15,0	1/1:6,12:17:3.42:120,3,0	0/1:28,0:24:0.35:0,0,0	0/1:36,0:33:68.14:68,0,1244	0/1:17,0:14:66.87:67,0,203	0/1:40,0:37:99:124,0,751	0/1:24,0:22:99:204,0,417	0/1:31,0:30:99:179,0,2017	0/1:28,0:24:99:116,0,817	0/0:8,0:8:1.10:0,1,777
chr10	24424522	.	TGTGTGTGTATGATGTG	T	4660.77	PASS	AB=1.000;AC=31;AF=0.554;AN=56;BaseQRankSum=-5.900;DP=803;FS=87.769;HRun=0;HaplotypeScore=294.6254;InbreedingCoeff=-0.4950;MQ=39.16;MQ0=100;MQRankSum=-4.146;QD=7.09;ReadPosRankSum=0.593;VQSLOD=-0.2459;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:39,0:37:14.84:205,15,0	0/1:11,0:10:99:220,0,120	0/0:61,0:3:6.02:0,6,111	0/0:76,0:11:8.98:0,9,235	0/1:26,0:23:99:150,0,499	0/1:28,0:27:47.76:48,0,569	0/1:27,0:25:99:195,0,900	0/1:33,0:31:99:276,0,1560	1/1:23,0:23:13.85:455,14,0	0/1:28,0:26:99:127,0,1077	0/1:22,0:22:88.22:88,0,394	0/1:35,0:33:99:289,0,1037	0/1:32,0:30:99:196,0,1106	0/1:30,0:28:99:106,0,568	0/1:30,0:28:99:225,0,442	0/1:31,0:30:99:406,0,488	1/1:16,0:16:3:229,3,0	0/1:12,0:12:99:280,0,128	1/1:7,5:8:15.33:309,15,0	1/1:17,1:17:3.48:91,3,0	1/1:28,0:24:0.40:1,0,0	0/1:35,0:32:68.14:68,0,1169	0/1:16,0:14:66.87:67,0,193	0/1:40,0:37:99:121,0,769	0/1:24,0:22:99:204,0,376	0/1:31,0:30:99:179,0,1913	0/1:30,0:26:99:126,0,789	0/0:8,0:8:1.10:0,1,690
chr10	24424528	.	TGTATGATGTG	T	4734.96	PASS	AB=0.989;AC=31;AF=0.554;AN=56;BaseQRankSum=-4.127;DP=792;FS=85.160;HRun=0;HaplotypeScore=250.2363;InbreedingCoeff=-0.4676;MQ=38.64;MQ0=104;MQRankSum=-3.743;QD=7.30;ReadPosRankSum=-3.886;VQSLOD=-0.6490;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:38,0:36:14.86:205,15,0	0/1:10,0:9:99:217,0,169	0/0:62,0:3:9.03:0,9,224	0/0:73,0:10:15.51:0,16,363	0/1:27,0:24:99:147,0,490	0/1:27,0:26:76.46:76,0,566	0/1:27,0:25:99:236,0,754	0/1:34,0:32:99:237,0,1709	1/1:23,0:23:12.03:297,12,0	0/1:24,0:22:99:140,0,854	0/1:21,0:21:88.32:88,0,352	0/1:36,0:34:99:328,0,1047	0/1:29,0:27:99:220,0,883	0/1:29,0:27:99:125,0,621	0/1:33,0:30:99:272,0,551	0/1:30,0:29:99:462,0,429	1/1:5,13:18:15.05:394,15,0	0/1:8,3:11:99:231,0,193	1/1:12,0:7:13.51:244,14,0	1/1:16,1:16:2.83:52,3,0	1/1:29,0:24:0.35:1,0,0	0/1:34,0:31:68.14:68,0,977	0/1:16,0:14:63.86:64,0,241	0/1:38,0:35:99:118,0,710	0/1:25,0:23:99:198,0,457	0/1:31,0:30:99:183,0,1579	0/1:30,0:26:99:132,0,716	0/0:8,0:8:1.10:0,1,532
chr10	24424538	.	GGT	G	5957.24	PASS	AB=0.822;AC=40;AF=0.714;AN=56;BaseQRankSum=-5.578;DP=716;FS=5.388;HRun=0;HaplotypeScore=171.3799;InbreedingCoeff=0.4574;MQ=39.20;MQ0=100;MQRankSum=5.964;QD=12.11;ReadPosRankSum=3.184;VQSLOD=4.3084;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:38,0:37:0.13:1,0,0	1/1:2,4:6:9.02:100,9,0	0/0:66,0:4:6.02:0,6,92	0/0:70,0:8:23.89:0,24,243	1/1:9,13:22:27.02:326,27,0	1/1:11,12:24:27.03:306,27,0	1/1:8,16:22:29.76:338,30,0	0/0:29,0:29:4.34:0,4,178	1/1:21,0:22:8.69:37,9,0	1/1:5,17:19:30.70:534,31,0	1/1:5,9:15:17.90:217,18,0	1/1:14,16:29:45.10:530,45,0	1/1:13,11:23:10.40:361,10,0	0/1:15,11:25:25.21:213,0,25	1/1:11,16:24:30.05:345,30,0	1/1:9,18:28:26.16:308,26,0	0/1:15,0:16:5.96:18,0,6	0/0:9,0:9:1.74:0,2,53	0/1:12,0:7:7.15:7,0,13	0/0:18,0:17:1.08:0,1,3	0/0:30,0:26:1.22:0,1,3	1/1:11,19:27:41.99:500,42,0	1/1:7,6:11:11.97:145,12,0	1/1:10,22:31:29.78:339,30,0	1/1:8,10:16:18.05:217,18,0	0/1:7,15:24:34.82:508,0,35	1/1:13,12:23:33.05:374,33,0	1/1:0,6:7:20.90:231,21,0
chr10	24424551	.	GTGTGTGTA	G	897.44	PASS	AB=0.932;AC=7;AF=0.125;AN=56;BaseQRankSum=0.586;DP=718;FS=4.888;HRun=0;HaplotypeScore=227.5972;InbreedingCoeff=-0.1300;MQ=44.16;MQ0=61;MQRankSum=-0.526;QD=4.80;ReadPosRankSum=-3.022;VQSLOD=2.1261;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:42,0:40:3.71:4,0,66	0/0:8,0:8:15.04:0,15,279	0/1:55,0:9:11.78:12,0,262	0/0:58,0:17:30.10:0,30,576	0/0:22,0:21:27.09:0,27,634	0/0:24,0:24:39.58:0,40,821	0/0:26,0:24:43.76:0,44,721	0/1:3,27:32:64.53:862,0,65	0/1:25,0:25:92.32:92,0,181	0/0:25,0:22:61.36:0,61,1210	0/0:19,0:19:33.05:0,33,699	0/0:30,0:29:50.74:0,51,1117	0/0:25,0:24:60.94:0,61,969	0/0:25,0:25:42.74:0,43,900	0/0:29,0:27:50.77:0,51,917	0/0:28,0:28:50.59:0,51,843	0/1:14,0:14:31.21:31,0,40	0/1:9,0:9:3.43:3,0,102	0/1:9,0:7:11.66:12,0,107	0/0:21,0:20:11.19:0,11,91	0/0:31,0:28:11.89:0,12,92	0/0:32,0:31:50.82:0,51,1068	0/0:15,0:14:20.83:0,21,336	0/0:38,0:37:47.93:0,48,934	0/0:18,0:16:26.99:0,27,598	0/0:25,0:25:68.81:0,69,1310	0/0:25,0:24:47.90:0,48,872	0/0:7,0:7:21.05:0,21,446
chr10	24424553	.	GTGTGTA	G	458.12	PASS	AB=0.998;AC=10;AF=0.179;AN=56;BaseQRankSum=4.004;DP=709;FS=0.575;HRun=0;HaplotypeScore=209.8907;InbreedingCoeff=0.0144;MQ=45.06;MQ0=51;MQRankSum=-2.101;QD=1.86;ReadPosRankSum=-2.538;VQSLOD=2.3960;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:14,28:40:21.07:146,21,0	0/0:8,0:8:15.03:0,15,185	0/1:53,0:12:2.78:3,0,299	0/0:53,0:18:30.55:0,31,554	0/0:22,1:22:35.96:0,36,404	0/0:22,0:22:39.10:0,39,518	0/1:25,0:23:5.75:6,0,356	0/1:32,0:31:99:347,0,163	0/1:22,0:22:45.21:45,0,143	0/0:24,0:22:59.40:0,59,675	0/0:19,0:19:33.03:0,33,442	0/0:28,0:27:50.72:0,51,616	0/0:26,0:25:0.59:0,1,491	0/0:26,0:26:42.20:0,42,609	0/0:30,0:28:53.72:0,54,590	0/0:28,0:28:31.11:0,31,526	0/1:13,0:13:20.36:20,0,39	0/0:9,0:9:3.35:0,3,84	0/1:9,0:7:2.43:2,0,78	0/0:22,0:21:20.32:0,20,152	0/1:34,0:31:6.86:7,0,99	0/0:31,0:30:14.91:0,15,562	0/1:15,0:14:15.13:15,0,188	0/0:37,0:36:47.18:0,47,587	0/0:18,0:16:30.03:0,30,357	0/0:25,0:25:34.33:0,34,766	0/0:25,0:24:0.19:0,0,466	0/0:8,0:8:20.28:0,20,235
chr10	24424557	.	GTA	G	1678.35	PASS	AB=0.983;AC=24;AF=0.429;AN=56;BaseQRankSum=9.973;DP=666;FS=2.723;HRun=0;HaplotypeScore=162.0247;InbreedingCoeff=-0.4708;MQ=47.51;MQ0=21;MQRankSum=0.876;QD=3.24;ReadPosRankSum=12.638;VQSLOD=0.6711;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:36,0:35:20.99:127,21,0	0/1:6,1:7:35.61:52,0,36	0/0:46,0:16:2.23:0,2,298	0/0:43,0:20:35.06:0,35,455	0/1:22,0:21:32.22:77,0,32	0/1:21,1:22:58.36:95,0,58	0/1:24,0:22:88.61:89,0,93	0/1:32,0:31:99:212,0,253	0/0:19,0:19:19.05:0,19,137	0/1:27,0:25:99:122,0,106	0/1:18,1:19:49.75:50,0,110	0/1:23,0:22:25.22:136,0,25	0/1:28,0:28:99:134,0,175	0/1:26,0:26:25.67:26,0,214	0/1:31,0:29:59.97:60,0,212	0/1:28,1:29:63.83:64,0,140	0/0:12,0:12:14.52:0,15,72	0/1:7,0:7:7.56:8,0,36	0/0:9,0:7:14.12:0,14,103	0/0:19,0:19:20.72:0,21,163	0/1:35,0:34:5.03:5,0,119	0/1:30,1:30:69.56:155,0,70	0/1:12,0:11:25.10:25,0,54	0/1:36,0:35:88.42:88,0,130	0/1:14,1:15:41.51:42,0,54	0/1:25,0:25:96.66:97,0,119	0/1:21,0:20:77.94:111,0,78	1/1:8,0:8:10.05:68,10,0
chr10	24424646	.	CGTGA	C	1188.12	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.620;DP=896;FS=22.444;HRun=0;HaplotypeScore=159.8174;InbreedingCoeff=0.9900;MQ=58.82;MQ0=4;MQRankSum=-3.904;QD=37.13;ReadPosRankSum=-4.419;VQSLOD=1.3362;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:57:99:0,126,3377	0/0:8,0:8:24.01:0,24,528	0/0:44,0:33:89.91:0,90,1801	0/0:42,0:38:95.58:0,96,1843	0/0:34,0:34:96.22:0,96,2324	0/0:24,0:24:57.15:0,57,1468	0/0:30,0:29:84.27:0,84,2104	1/1:4,28:32:81.12:1283,81,0	0/0:28,0:28:75.26:0,75,2019	0/0:41,0:41:99:0,108,2878	0/0:25,0:26:75.22:0,75,1835	0/0:30,0:29:78.25:0,78,2011	0/0:40,0:39:99:0,108,2500	0/0:38,0:38:99:0,105,2596	0/0:40,0:40:99:0,105,2669	0/0:47,0:47:99:0,135,3423	0/0:18,0:18:48.13:0,48,1157	0/0:8,0:8:21.07:0,21,565	0/0:9,0:9:24.08:0,24,606	0/0:38,0:38:99:0,105,2648	0/0:58,0:58:99:0,138,3272	0/0:37,0:37:99:0,108,2787	0/0:23,0:23:69.22:0,69,1787	0/0:46,0:46:99:0,108,2694	0/0:25,0:25:72.24:0,72,1887	0/0:35,0:35:99:0,102,2547	0/0:30,0:30:81.26:0,81,2116	0/0:8,0:8:24.08:0,24,645
chr10	24426344	.	C	CAAA	15543.48	PASS	AB=0.595;AC=48;AF=0.857;AN=56;BaseQRankSum=-7.807;DP=682;FS=0.000;HRun=10;HaplotypeScore=124.9622;InbreedingCoeff=0.6533;MQ=73.79;MQ0=3;MQRankSum=-2.768;QD=25.99;ReadPosRankSum=3.170;VQSLOD=3.1937;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:22:52.99:0,53,338	1/1:2,9:13:30.06:506,30,0	0/0:34,0:23:41.50:0,41,461	0/0:26,0:24:10.60:0,11,319	1/1:6,24:32:72.09:1204,72,0	1/1:3,18:24:46.83:781,47,0	1/1:3,11:16:25.33:449,25,0	0/1:15,0:39:34.70:129,0,35	1/1:1,0:19:44.83:343,45,0	1/1:2,22:26:72.22:1258,72,0	1/1:4,12:25:61.19:836,61,0	1/1:6,13:21:21.03:335,21,0	1/1:4,14:18:15.93:290,16,0	1/1:3,24:28:32.61:581,33,0	1/1:5,24:30:45.15:850,45,0	1/1:7,20:31:48.10:804,48,0	1/1:3,4:29:61.10:600,61,0	1/1:4,0:16:32.89:258,33,0	0/1:5,2:20:16.98:332,0,17	1/1:4,6:40:99:992,103,0	1/1:1,0:13:20.92:160,21,0	1/1:2,10:15:38.95:518,39,0	1/1:3,16:25:48.15:842,48,0	1/1:1,6:9:18.04:278,18,0	1/1:5,16:24:3.27:580,3,0	1/1:7,23:31:67.70:1086,68,0	1/1:8,28:38:60.66:1106,61,0	1/1:3,9:13:22.16:423,22,0
chr10	24426776	.	C	CAA	3869.07	PASS	AB=0.559;AC=14;AF=0.250;AN=56;BaseQRankSum=-1.929;DP=518;FS=3.474;HRun=10;HaplotypeScore=67.3213;InbreedingCoeff=0.8255;MQ=66.83;MQ0=0;MQRankSum=-0.356;QD=24.18;ReadPosRankSum=-0.467;VQSLOD=3.2852;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:7,0:26:51.72:89,0,52	0/0:6,0:7:17.75:0,18,156	0/0:14,0:16:29.24:0,29,249	0/0:11,0:11:3.21:0,3,92	0/0:28,0:30:65.56:0,66,697	0/0:25,0:26:62.76:0,63,610	0/0:7,0:7:18.04:0,18,183	1/1:16,0:30:47.90:429,48,0	1/1:3,6:10:15.04:207,15,0	0/0:23,0:24:68.85:0,69,667	0/0:22,0:23:62.83:0,63,614	0/0:16,0:18:53.58:0,54,505	0/0:23,0:23:57.07:0,57,580	0/0:16,0:16:48.08:0,48,474	0/0:19,0:19:48.03:0,48,466	0/0:10,0:10:27.06:0,27,275	1/1:1,25:28:53.54:867,54,0	1/1:2,14:17:41.63:597,42,0	0/1:1,8:10:0.10:369,0,0	1/1:5,21:29:71.17:955,71,0	1/1:2,8:10:24.08:357,24,0	0/0:11,0:11:30.06:0,30,305	0/0:20,0:21:47.84:0,48,540	0/0:15,0:15:42.09:0,42,427	0/0:17,0:18:35.79:0,36,418	0/0:18,0:19:50.81:0,51,487	0/0:32,0:32:71.74:0,72,771	0/0:11,0:11:30.06:0,30,305
chr10	24427111	.	TA	T	1078.21	PASS	AB=0.857;AC=5;AF=0.089;AN=56;BaseQRankSum=3.932;DP=548;FS=3.361;HRun=10;HaplotypeScore=64.1169;InbreedingCoeff=0.6921;MQ=73.14;MQ0=2;MQRankSum=0.793;QD=15.63;ReadPosRankSum=-1.015;VQSLOD=3.7694;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:3,27:30:62.97:547,63,0	0/1:5,1:6:11.03:11,0,107	0/0:31,0:21:15.76:0,16,292	0/0:18,0:7:8.96:0,9,84	0/0:27,0:30:80.63:0,81,848	0/0:26,0:26:66.18:0,66,730	0/0:11,0:11:24.02:0,24,245	1/1:7,26:33:74.96:648,75,0	0/0:11,0:11:26.65:0,27,268	0/0:30,0:30:90.22:0,90,981	0/0:21,0:21:42.10:0,42,456	0/0:13,0:13:36.10:0,36,398	0/0:19,0:19:54.13:0,54,586	0/0:10,0:10:24.05:0,24,258	0/0:19,0:19:51.11:0,51,553	0/0:10,0:10:24.06:0,24,266	0/0:23,0:24:72.03:0,72,774	0/0:10,1:11:1.01:0,1,231	0/0:23,0:24:59.99:0,60,637	0/0:31,0:31:87.24:0,87,962	0/0:7,0:8:20.89:0,21,213	0/0:9,0:9:27.06:0,27,290	0/0:14,0:14:36.10:0,36,398	0/0:23,0:23:60.14:0,60,653	0/0:24,1:25:40.11:0,40,660	0/0:25,0:25:53.91:0,54,714	0/0:27,0:27:69.17:0,69,754	0/0:8,0:8:24.06:0,24,265
chr10	24427631	.	C	CA	2766.24	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=-10.354;DP=734;FS=6.550;HRun=2;HaplotypeScore=72.0896;InbreedingCoeff=0.7902;MQ=73.58;MQ0=0;MQRankSum=-2.247;QD=24.48;ReadPosRankSum=-0.928;VQSLOD=2.7376;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,50:50:99:1876,132,0	0/0:10,0:10:30.09:0,30,372	0/0:24,0:24:30.40:0,30,567	0/1:34,0:34:11.68:12,0,621	0/0:34,0:34:99:0,102,1235	0/0:20,0:20:57.12:0,57,676	0/0:22,0:22:66.19:0,66,806	1/1:3,26:29:75.20:1007,75,0	0/0:30,0:30:90.27:0,90,1102	0/0:44,0:44:99:0,126,1530	0/0:16,0:16:48.12:0,48,569	0/0:29,0:29:81.25:0,81,1004	0/0:24,0:24:69.22:0,69,855	0/0:27,0:27:72.19:0,72,854	0/0:26,0:26:72.23:0,72,892	0/0:31,0:31:93.29:0,93,1153	0/0:22,0:22:63.20:0,63,781	0/0:16,0:16:42.13:0,42,520	0/0:25,0:25:72.22:0,72,882	0/0:20,0:20:60.17:0,60,720	0/0:26,0:26:66.21:0,66,817	0/0:23,0:23:62.93:0,63,755	0/0:14,0:14:42.13:0,42,521	0/0:28,0:28:84.26:0,84,1039	0/0:20,0:20:60.19:0,60,744	0/0:34,0:34:99:0,99,1226	0/0:49,0:48:99:0,144,1771	0/0:7,0:7:21.07:0,21,260
chr10	24428112	.	CTTAA	C	1059.74	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.673;DP=558;FS=4.295;HRun=0;HaplotypeScore=87.4861;InbreedingCoeff=0.9862;MQ=74.48;MQ0=0;MQRankSum=-2.715;QD=34.19;ReadPosRankSum=1.849;VQSLOD=3.6603;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,28:31:63.22:1155,63,0	0/0:8,0:8:24.08:0,24,634	0/0:14,0:14:30.10:0,30,730	0/0:14,0:14:32.85:0,33,707	0/0:30,0:30:87.30:0,87,2264	0/0:23,0:23:69.24:0,69,1783	0/0:16,0:16:45.14:0,45,1122	0/0:38,0:38:96.32:0,96,2455	0/0:13,0:13:36.12:0,36,896	0/0:19,0:19:54.19:0,54,1424	0/0:21,0:21:60.21:0,60,1496	0/0:15,0:15:33.11:0,33,832	0/0:21,0:21:60.21:0,60,1572	0/0:12,0:12:33.11:0,33,837	0/0:22,0:22:63.17:0,63,1569	0/0:16,0:16:48.16:0,48,1249	0/0:20,0:20:57.20:0,57,1485	0/0:9,0:9:27.07:0,27,579	0/0:18,0:18:51.17:0,51,1236	0/0:25,0:25:66.23:0,66,1662	0/0:11,0:11:33.11:0,33,871	0/0:10,0:10:27.09:0,27,706	0/0:21,0:21:63.22:0,63,1589	0/0:7,0:7:18.06:0,18,448	0/0:30,0:30:81.26:0,81,2025	0/0:34,0:34:99:0,102,2612	0/0:46,0:45:99:0,120,3130	0/0:14,0:14:33.11:0,33,684
chr10	24428683	.	TA	T	1339.36	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.369;DP=548;FS=0.649;HRun=1;HaplotypeScore=49.4650;InbreedingCoeff=0.9250;MQ=78.92;MQ0=1;MQRankSum=-1.208;QD=38.27;ReadPosRankSum=-4.115;VQSLOD=2.3642;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:48.16:0,48,756	0/0:6,0:6:18.06:0,18,288	0/0:12,0:12:33.11:0,33,497	0/0:13,1:14:10.83:0,11,414	0/0:38,0:38:99:0,111,1751	0/0:18,0:18:54.14:0,54,813	0/0:14,0:14:42.14:0,42,669	1/1:0,35:35:99:1434,105,0	0/0:14,0:14:42.14:0,42,671	0/0:27,0:27:81.27:0,81,1272	0/0:32,0:32:96.33:0,96,1534	0/0:16,0:16:48.15:0,48,733	0/0:19,0:19:57.18:0,57,886	0/0:16,0:16:48.16:0,48,767	0/0:21,0:21:63.20:0,63,978	0/0:21,0:21:63.21:0,63,1005	0/0:17,0:17:51.17:0,51,804	0/0:15,0:14:42.14:0,42,671	0/0:15,0:15:45.13:0,45,675	0/0:41,0:41:99:0,123,1939	0/0:13,0:13:39.13:0,39,623	0/0:18,0:18:54.18:0,54,863	0/0:21,0:21:63.20:0,63,983	0/0:8,0:8:24.08:0,24,384	0/0:18,0:18:54.18:0,54,863	0/0:28,0:28:84.28:0,84,1321	0/0:29,0:29:87.23:0,87,1315	0/0:4,0:4:12.04:0,12,192
chr10	24430554	.	C	CA	12670.33	PASS	AB=1.000;AC=47;AF=0.979;AN=48;DP=350;FS=0.000;HRun=1;HaplotypeScore=228.7460;InbreedingCoeff=0.4680;MQ=33.53;MQ0=0;QD=36.51;VQSLOD=4.0485;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,5:5:15.05:219,15,0	1/1:0,5:5:15.05:220,15,0	0/1:1,0:1:0:0,0,0	./.	1/1:8,15:23:38.53:482,39,0	1/1:1,17:18:51.10:734,51,0	1/1:2,4:6:12:154,12,0	1/1:10,25:35:90.26:1288,90,0	1/1:0,7:6:18.06:270,18,0	1/1:3,24:27:81.19:1155,81,0	1/1:3,18:21:39.13:582,39,0	1/1:2,11:13:30.07:424,30,0	1/1:0,13:13:36.09:515,36,0	1/1:3,8:10:26.99:352,27,0	1/1:2,8:9:21.07:314,21,0	1/1:0,10:9:27.09:403,27,0	1/1:0,3:3:9.03:135,9,0	./.	1/1:3,14:17:51.15:734,51,0	1/1:4,25:29:81.19:1159,81,0	./.	1/1:0,10:10:27.09:403,27,0	1/1:1,19:20:54.18:805,54,0	./.	1/1:3,12:15:42.01:553,42,0	1/1:6,17:22:54.18:800,54,0	1/1:2,20:22:60.14:835,60,0	1/1:0,3:3:9.03:134,9,0
chr10	24430584	.	G	GA	12743.26	PASS	AC=46;AF=1.000;AN=46;DP=367;FS=0.000;HRun=3;HaplotypeScore=341.3893;InbreedingCoeff=-0.0100;MQ=30.28;MQ0=0;QD=34.82;VQSLOD=2.6190;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,4:4:12.04:168,12,0	1/1:3,5:8:18.03:229,18,0	./.	./.	1/1:2,19:21:51.12:680,51,0	1/1:3,15:18:48.13:650,48,0	1/1:0,6:6:18.06:251,18,0	1/1:8,26:34:90.26:1223,90,0	1/1:0,9:8:24.05:316,24,0	1/1:5,20:25:63.18:860,63,0	1/1:1,18:19:54.14:732,54,0	1/1:1,14:15:39.10:524,39,0	1/1:2,16:18:45.15:630,45,0	1/1:1,14:14:36.12:503,36,0	1/1:0,13:12:33.08:440,33,0	1/1:1,15:15:42.11:566,42,0	1/1:1,5:5:15.05:206,15,0	./.	1/1:1,21:22:66.22:923,66,0	1/1:2,25:27:75.21:1017,75,0	./.	1/1:0,9:9:27.05:355,27,0	1/1:6,16:22:45.15:628,45,0	./.	1/1:3,9:12:27.09:377,27,0	1/1:3,16:18:42.10:565,42,0	1/1:3,23:26:63.17:859,63,0	1/1:1,1:2:3.01:42,3,0
chr10	24430612	.	G	GA	8658.94	PASS	AC=48;AF=0.923;AN=52;BaseQRankSum=1.387;DP=337;FS=1.987;HRun=2;HaplotypeScore=333.5008;InbreedingCoeff=0.6318;MQ=46.27;MQ0=0;MQRankSum=-3.463;QD=26.32;ReadPosRankSum=2.996;VQSLOD=3.6791;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,4:6:9.03:112,9,0	1/1:0,8:8:23.95:263,24,0	0/0:4,0:4:2.92:0,3,8	0/0:3,0:3:6:0,6,21	1/1:2,18:20:39.12:464,39,0	1/1:4,15:19:38.97:416,39,0	1/1:1,7:8:21.02:242,21,0	1/1:5,17:22:39.54:522,40,0	1/1:0,10:8:24:269,24,0	1/1:4,18:22:54.14:721,54,0	1/1:2,17:19:45.01:471,45,0	1/1:1,13:14:36:395,36,0	1/1:0,14:14:32.77:290,33,0	1/1:2,17:18:45.06:519,45,0	1/1:1,8:9:21.02:241,21,0	1/1:2,17:19:44.91:472,45,0	1/1:0,5:4:9.03:117,9,0	./.	1/1:1,5:6:15.05:211,15,0	1/1:2,21:23:53.87:558,54,0	1/1:0,2:2:3.44:21,3,0	1/1:0,10:10:27:292,27,0	1/1:1,15:16:38.08:369,38,0	./.	1/1:0,11:11:26.91:292,27,0	1/1:2,19:20:48.16:653,48,0	1/1:0,24:24:57.06:709,57,0	1/1:0,1:1:3.01:40,3,0
chr10	24430620	.	A	AC	4221.72	PASS	AB=0.750;AC=48;AF=0.923;AN=52;BaseQRankSum=3.038;DP=212;FS=4.089;HRun=1;HaplotypeScore=262.4064;InbreedingCoeff=0.1507;MQ=56.69;MQ0=0;MQRankSum=-0.061;QD=20.10;ReadPosRankSum=2.535;VQSLOD=4.6121;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,3:3:8.95:67,9,0	1/1:0,6:6:17.93:140,18,0	1/1:3,0:4:3.89:45,4,0	0/1:4,0:4:25.02:33,0,25	1/1:0,17:17:38.57:270,39,0	1/1:0,9:9:26.83:198,27,0	1/1:0,6:6:17.90:131,18,0	0/1:0,6:6:7.55:9,0,8	1/1:0,6:5:14.92:111,15,0	1/1:0,11:11:33.06:344,33,0	1/1:0,13:13:35.39:223,35,0	1/1:0,9:9:26.84:198,27,0	1/1:1,5:6:12.83:91,13,0	1/1:0,13:13:38.71:280,39,0	1/1:0,7:7:17.90:133,18,0	1/1:0,12:12:35.83:274,36,0	1/1:0,3:2:5.96:44,6,0	./.	1/1:0,3:3:9.02:88,9,0	1/1:0,13:13:38.80:294,39,0	0/0:0,1:1:0.47:0,0,1	1/1:0,8:8:23.78:168,24,0	1/1:0,11:11:32.46:237,32,0	./.	1/1:0,9:9:26.86:204,27,0	1/1:0,13:12:30.02:278,30,0	1/1:0,16:16:41.89:339,42,0	1/1:0,1:1:3:25,3,0
chr10	24430623	.	ATT	A	3480.93	PASS	AB=1.000;AC=48;AF=0.923;AN=52;BaseQRankSum=2.943;DP=211;FS=2.289;HRun=3;HaplotypeScore=268.5606;InbreedingCoeff=0.1167;MQ=56.82;MQ0=0;MQRankSum=-2.869;QD=16.66;ReadPosRankSum=2.147;VQSLOD=1.1918;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,3:3:8.86:57,9,0	1/1:0,6:6:17.59:110,18,0	0/1:4,0:4:45.68:46,0,57	0/1:4,0:4:6.32:56,0,6	1/1:0,17:17:36.99:187,37,0	1/1:0,9:9:26.56:168,27,0	1/1:0,6:6:17.67:109,18,0	1/1:0,6:6:4.75:13,5,0	1/1:0,6:5:14.76:92,15,0	1/1:0,11:11:32.98:290,33,0	1/1:0,13:13:34.16:168,34,0	1/1:0,9:9:26.51:163,27,0	1/1:1,5:6:12.26:74,12,0	1/1:0,13:13:37.99:221,38,0	1/1:0,7:7:17.66:108,18,0	1/1:0,12:12:35.48:232,35,0	1/1:0,3:2:5.88:36,6,0	./.	1/1:0,3:3:9.01:84,9,0	1/1:0,13:13:38.12:233,38,0	0/0:0,1:1:0:0,0,0	1/1:0,8:8:23.30:137,23,0	1/1:0,11:11:29.06:166,29,0	./.	1/1:0,9:9:26.60:171,27,0	1/1:0,13:12:29.95:247,30,0	1/1:1,15:16:41.56:293,42,0	1/1:0,1:1:2.99:23,3,0
chr10	24430633	.	GT	G	7750.38	PASS	AB=0.917;AC=50;AF=0.962;AN=52;BaseQRankSum=3.594;DP=292;FS=6.126;HRun=1;HaplotypeScore=289.9527;InbreedingCoeff=0.1297;MQ=74.92;MQ0=0;MQRankSum=-3.565;QD=26.63;ReadPosRankSum=3.618;VQSLOD=3.8914;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,4:4:9.03:111,9,0	1/1:0,11:11:29.94:310,30,0	0/1:10,1:11:23.89:24,0,75	0/1:9,1:11:4.66:62,0,5	1/1:0,25:25:39.02:469,39,0	1/1:0,10:10:30.05:366,30,0	1/1:0,12:12:29.92:314,30,0	1/1:1,9:10:16.56:163,17,0	1/1:0,6:5:15.05:192,15,0	1/1:0,18:18:54.08:652,54,0	1/1:0,17:17:36.10:445,36,0	1/1:0,11:11:27.09:344,27,0	1/1:2,6:8:20.86:203,21,0	1/1:0,13:13:39.12:488,39,0	1/1:0,7:7:18.06:232,18,0	1/1:0,12:12:36.11:455,36,0	1/1:0,5:4:8.99:96,9,0	./.	1/1:1,4:5:15.01:181,15,0	1/1:0,16:16:39.12:488,39,0	1/1:0,3:3:0.47:1,0,0	1/1:0,11:11:24.07:308,24,0	1/1:0,13:13:32.46:380,32,0	./.	1/1:1,14:15:40.16:416,40,0	1/1:0,18:17:42:477,42,0	1/1:0,17:17:42.05:515,42,0	1/1:0,2:2:5.98:59,6,0
chr10	24430637	.	TG	T	7888.63	PASS	AC=48;AF=0.923;AN=52;BaseQRankSum=4.552;DP=300;FS=15.700;HRun=2;HaplotypeScore=291.0786;InbreedingCoeff=0.6559;MQ=79.61;MQ0=2;MQRankSum=-5.586;QD=28.90;ReadPosRankSum=4.479;VQSLOD=0.3097;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,4:4:9.03:103,9,0	1/1:0,11:11:33.01:358,33,0	0/0:14,0:14:12.93:0,13,222	0/0:12,0:12:0.05:0,0,123	1/1:0,25:25:41.81:408,42,0	1/1:0,10:10:30.09:356,30,0	1/1:0,12:12:35.98:396,36,0	1/1:2,10:12:19.21:189,19,0	1/1:0,6:5:15.05:178,15,0	1/1:0,18:18:54.16:649,54,0	1/1:0,17:17:44.96:465,45,0	1/1:0,11:11:30.04:337,30,0	1/1:1,7:8:21.06:247,21,0	1/1:1,13:13:39.11:450,39,0	1/1:0,7:7:18.05:214,18,0	1/1:0,12:12:36.11:420,36,0	1/1:0,5:4:11.98:126,12,0	./.	1/1:0,5:5:15.05:186,15,0	1/1:0,16:16:47.97:506,48,0	1/1:0,3:3:2.96:19,3,0	1/1:0,11:11:32.94:340,33,0	1/1:0,13:13:38.02:383,38,0	./.	1/1:0,15:15:45.03:491,45,0	1/1:1,17:17:45.08:518,45,0	1/1:1,17:17:42.04:477,42,0	1/1:0,2:2:6.02:73,6,0
chr10	24430643	.	GA	G	7872.58	PASS	AC=50;AF=0.926;AN=54;BaseQRankSum=4.471;DP=351;FS=24.599;HRun=5;HaplotypeScore=301.5059;InbreedingCoeff=0.7400;MQ=81.13;MQ0=5;MQRankSum=-7.461;QD=24.60;ReadPosRankSum=4.251;VQSLOD=0.0890;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,6:7:9.02:101,9,0	1/1:1,11:12:27.08:304,27,0	0/0:15,0:16:32.48:0,32,330	0/0:14,1:15:6.89:0,7,286	1/1:3,24:27:39.09:429,39,0	1/1:2,8:10:24.07:269,24,0	1/1:1,11:12:33.09:371,33,0	1/1:2,15:17:25.90:321,26,0	1/1:0,7:6:18.05:202,18,0	1/1:3,17:20:54.15:603,54,0	1/1:4,16:20:45.12:501,45,0	1/1:0,14:14:33.09:369,33,0	1/1:0,8:8:21.06:236,21,0	1/1:1,15:14:39.11:437,39,0	1/1:0,9:8:18.05:202,18,0	1/1:2,12:14:30.08:336,30,0	1/1:0,7:6:15.04:168,15,0	./.	1/1:1,5:6:15.04:170,15,0	1/1:0,19:19:51.14:570,51,0	1/1:1,4:5:5.75:66,6,0	1/1:2,10:12:33.07:355,33,0	1/1:0,13:13:35.99:384,36,0	1/1:1,3:4:3.01:34,3,0	1/1:1,15:16:48.12:530,48,0	1/1:2,16:17:42.12:474,42,0	1/1:3,17:19:33.09:371,33,0	1/1:0,2:2:6.02:68,6,0
chr10	24430760	.	G	GCA	1331.62	PASS	AB=0.651;AC=12;AF=0.222;AN=54;BaseQRankSum=-8.649;DP=590;FS=9.514;HRun=0;HaplotypeScore=134.4233;InbreedingCoeff=0.5720;MQ=57.55;MQ0=9;MQRankSum=2.898;QD=9.06;ReadPosRankSum=-1.098;VQSLOD=2.8294;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:25:5.68:0,6,28	0/0:9,0:10:5.85:0,6,47	1/1:40,0:18:0.47:1,0,0	./.	0/0:22,0:24:6.42:0,6,287	0/0:18,0:18:17.97:0,18,183	0/0:23,0:23:36.08:0,36,391	0/0:22,0:23:2.84:0,3,14	0/1:9,12:22:3.28:359,0,3	0/0:29,0:31:32.75:0,33,328	0/0:12,0:14:14.71:0,15,128	0/0:23,0:24:29.59:0,30,295	0/0:18,0:18:24:0,24,250	0/0:17,0:20:44.59:0,45,427	0/0:16,0:18:18.87:0,19,378	0/0:15,0:16:0.78:0,1,282	1/1:7,8:18:18.59:275,19,0	1/1:2,0:2:5.98:47,6,0	1/1:10,9:19:15.22:303,15,0	1/1:7,8:17:3.91:213,4,0	0/1:14,14:28:83.87:282,0,84	0/0:16,0:19:25.77:0,26,231	0/0:14,0:15:23.96:0,24,249	0/0:20,0:19:39.54:0,40,421	0/0:21,0:22:23.85:0,24,234	0/0:29,0:32:62.78:0,63,642	0/0:19,0:19:10.13:0,10,277	0/0:8,0:10:26.57:0,27,242
chr10	24431440	.	CATTATTATT	C	1778.19	PASS	AC=10;AF=0.227;AN=44;BaseQRankSum=4.201;DP=265;FS=0.000;HRun=0;HaplotypeScore=77.9828;InbreedingCoeff=0.6713;MQ=73.27;MQ0=3;MQRankSum=-4.679;QD=27.36;ReadPosRankSum=-0.598;VQSLOD=2.5719;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:24.08:0,24,885	0/0:8,0:8:9.03:0,9,283	./.	./.	0/0:7,0:7:6.02:0,6,268	0/0:13,0:13:24.08:0,24,1093	./.	0/0:32,0:39:27.09:0,27,497	1/1:5,5:10:9.03:248,9,0	0/0:7,0:7:12.04:0,12,500	0/0:5,0:5:3.01:0,3,137	0/0:3,0:3:3.01:0,3,137	0/0:6,0:6:12.04:0,12,510	0/0:7,0:7:15.05:0,15,685	0/0:8,0:8:12.04:0,12,548	0/0:4,0:4:6.02:0,6,237	1/1:4,5:9:3.01:83,3,0	1/1:11,1:12:6:106,6,0	1/1:6,11:17:33.04:739,33,0	1/1:8,9:17:27.09:745,27,0	./.	./.	0/0:5,0:5:3.01:0,3,86	./.	0/0:15,0:15:21.06:0,21,755	0/0:7,0:7:6.02:0,6,273	0/0:7,0:7:6:0,6,120	0/0:14,0:14:21.07:0,21,813
chr10	24431447	.	A	ATTT	444.26	PASS	AC=2;AF=0.038;AN=52;BaseQRankSum=2.120;DP=217;FS=0.000;HRun=2;HaplotypeScore=46.4224;InbreedingCoeff=0.5528;MQ=63.61;MQ0=3;MQRankSum=0.441;QD=29.62;ReadPosRankSum=1.205;VQSLOD=1.3065;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,12:15:24.08:536,24,0	0/0:7,0:7:20.97:0,21,195	0/0:4,0:3:9:0,9,81	0/0:8,0:4:11.97:0,12,107	0/0:7,0:7:20.99:0,21,218	0/0:12,0:12:36.07:0,36,499	./.	0/0:36,0:35:99:0,102,908	0/0:9,0:9:20.92:0,21,169	0/0:6,0:6:18.04:0,18,232	0/0:4,0:4:9:0,9,100	0/0:1,0:1:3.01:0,3,50	0/0:8,0:8:21.02:0,21,250	0/0:5,0:5:15.05:0,15,250	0/0:5,0:5:15.04:0,15,225	0/0:3,0:3:9:0,9,100	0/0:8,0:8:11.78:0,12,73	0/0:10,0:10:29.72:0,30,213	0/0:15,0:15:38.81:0,39,300	0/0:13,0:13:38.92:0,39,320	./.	0/0:2,0:2:5.99:0,6,50	0/0:5,0:5:14.98:0,15,125	0/0:2,0:2:5.98:0,6,47	0/0:12,0:12:35.90:0,36,392	0/0:5,0:5:15.03:0,15,180	0/0:5,0:5:11.98:0,12,98	0/0:10,0:10:26.88:0,27,302
chr10	24433133	.	AACACACACACAC	A	4683.92	PASS	AB=0.821;AC=29;AF=0.558;AN=52;BaseQRankSum=6.738;DP=578;FS=19.965;HRun=0;HaplotypeScore=184.6647;InbreedingCoeff=0.0847;MQ=65.34;MQ0=6;MQRankSum=-3.828;QD=12.73;ReadPosRankSum=-0.486;VQSLOD=2.0503;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:18.45:0,18,228	1/1:3,3:6:3.01:103,3,0	./.	./.	0/1:16,5:21:25.12:254,0,25	0/1:13,5:18:37.03:200,0,37	0/1:14,0:15:8.80:151,0,9	0/0:28,0:26:3.01:0,3,41	0/0:9,0:11:0.85:0,1,19	0/1:21,0:21:5.45:216,0,5	1/1:8,6:14:14.92:265,15,0	1/1:12,3:16:9.50:290,10,0	0/1:17,10:27:8.36:395,0,8	1/1:8,10:18:6.02:205,6,0	1/1:12,5:17:9.03:250,9,0	1/1:9,1:20:10.41:194,10,0	0/0:14,0:20:7.80:0,8,91	0/0:6,0:6:6.49:0,6,145	0/1:16,0:20:26.20:26,0,184	0/0:11,0:16:5.48:0,5,124	0/0:30,0:29:11.98:0,12,137	1/1:18,8:26:9.09:226,9,0	0/1:20,5:24:31.22:300,0,31	1/1:13,8:21:3.01:103,3,0	1/1:8,9:17:1.03:612,1,0	0/1:23,9:32:58.18:419,0,58	0/1:13,8:22:30.48:369,0,30	1/1:10,0:10:12:106,12,0
chr10	24433181	.	CACAA	C	267.36	PASS	AB=1.000;AC=10;AF=0.179;AN=56;BaseQRankSum=9.400;DP=598;FS=27.900;HRun=0;HaplotypeScore=143.1275;InbreedingCoeff=0.2035;MQ=60.23;MQ0=22;MQRankSum=-8.155;QD=1.60;ReadPosRankSum=4.693;VQSLOD=0.8205;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:6,24:27:7.54:110,8,0	0/0:8,0:8:7.31:0,7,85	0/0:35,0:15:41.25:0,41,361	0/0:37,0:18:23.69:0,24,375	0/0:21,0:20:31.46:0,31,325	0/0:11,0:11:6.32:0,6,130	0/0:17,0:15:32.81:0,33,336	1/1:13,0:10:15.14:215,15,0	0/0:14,0:14:26.43:0,26,250	0/1:14,0:13:11.44:11,0,190	0/0:27,0:26:30.12:0,30,456	0/0:16,0:16:8.96:0,9,257	0/1:22,0:21:19.81:20,0,195	0/0:29,0:29:31.28:0,31,453	0/0:26,0:25:30.17:0,30,400	0/0:27,0:27:18.56:0,19,291	0/0:28,0:27:50.68:0,51,454	0/0:13,0:13:13.70:0,14,218	0/0:26,0:23:7.85:0,8,375	0/1:17,0:17:11.66:12,0,152	0/0:40,0:38:65.88:0,66,657	0/0:18,0:16:22.04:0,22,245	0/0:16,0:16:11.21:0,11,213	0/0:17,0:17:10.80:0,11,143	0/1:19,0:19:17.65:18,0,202	0/1:30,0:28:20.36:20,0,382	0/1:22,0:22:7.05:7,0,186	0/0:5,0:5:11.48:0,11,83
chr10	24435768	.	ACC	A	1520.02	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.773;DP=534;FS=2.106;HRun=4;HaplotypeScore=61.2598;InbreedingCoeff=0.9789;MQ=78.51;MQ0=0;MQRankSum=-0.126;QD=36.19;ReadPosRankSum=-3.760;VQSLOD=2.5719;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:66.23:0,66,1236	0/0:6,0:6:18.06:0,18,337	0/0:14,0:14:18.33:0,18,461	0/0:11,0:11:30.07:0,30,475	0/0:13,0:13:39.13:0,39,728	0/0:27,0:27:81.28:0,81,1518	0/0:18,0:18:51.17:0,51,948	1/1:5,37:42:99:1615,111,0	0/0:23,0:23:69.23:0,69,1262	0/0:22,0:22:63.22:0,63,1178	0/0:15,0:15:45.15:0,45,843	0/0:10,0:10:30.10:0,30,556	0/0:21,0:21:60.21:0,60,1115	0/0:21,0:21:60.21:0,60,1113	0/0:33,0:33:96.33:0,96,1777	0/0:28,0:28:84.28:0,84,1533	0/0:23,0:23:69.24:0,69,1293	0/0:7,0:7:21.07:0,21,384	0/0:22,0:22:60.18:0,60,1087	0/0:15,0:15:42.14:0,42,781	0/0:22,0:22:66.23:0,66,1231	0/0:10,0:10:30.09:0,30,533	0/0:11,0:11:33.11:0,33,618	0/0:15,0:15:45.15:0,45,838	0/0:19,0:19:57.17:0,57,1011	0/0:22,0:22:66.22:0,66,1191	0/0:27,0:27:81.28:0,81,1502	0/0:14,0:13:36.12:0,36,674
chr10	24435928	.	TA	T	9470.87	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-4.999;DP=533;FS=23.450;HRun=11;HaplotypeScore=59.2689;InbreedingCoeff=0.8138;MQ=75.84;MQ0=0;MQRankSum=-3.646;QD=19.33;ReadPosRankSum=4.390;VQSLOD=3.9507;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,18:22:44.93:369,45,0	1/1:1,5:6:11.98:99,12,0	0/0:21,1:17:1.95:0,2,209	0/0:19,0:15:23.74:0,24,211	1/1:4,26:30:68.90:567,69,0	1/1:0,18:18:47.95:394,48,0	1/1:2,9:11:26.95:222,27,0	1/1:6,27:34:82.39:663,82,0	1/1:2,14:17:40.99:326,41,0	1/1:5,20:25:56.89:468,57,0	1/1:3,16:22:54.05:412,54,0	1/1:1,9:10:26.97:222,27,0	1/1:5,26:31:71.87:591,72,0	1/1:3,13:17:9:269,9,0	1/1:2,16:18:47.94:394,48,0	1/1:1,19:21:34.70:417,35,0	1/1:6,12:18:30.85:248,31,0	1/1:0,4:4:11.99:99,12,0	1/1:5,7:12:20.94:168,21,0	1/1:3,21:25:58.95:474,59,0	1/1:1,6:7:17.97:148,18,0	1/1:0,19:19:50.93:419,51,0	1/1:3,15:18:48.63:379,49,0	1/1:1,9:10:23.97:197,24,0	1/1:3,16:19:41.93:345,42,0	1/1:7,33:40:99:823,102,0	1/1:5,24:30:76.82:612,77,0	1/1:0,6:6:17.98:148,18,0
chr10	24436324	.	AAC	A	2041.29	PASS	AB=0.727;AC=38;AF=0.760;AN=50;BaseQRankSum=4.028;DP=536;FS=0.791;HRun=0;HaplotypeScore=81.3034;InbreedingCoeff=0.5105;MQ=70.71;MQ0=2;MQRankSum=1.586;QD=5.64;ReadPosRankSum=1.181;VQSLOD=2.9313;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:8.74:0,9,74	1/1:6,2:8:3.01:33,3,0	./.	./.	0/0:23,0:23:32.30:0,32,375	1/1:19,1:21:32.24:265,32,0	1/1:13,5:18:3.01:33,3,0	0/0:31,0:30:18.84:0,19,113	1/1:10,0:16:5.64:27,6,0	1/1:12,2:14:5.53:64,6,0	1/1:18,0:18:26.72:226,27,0	1/1:9,8:18:8.86:79,9,0	1/1:14,1:15:14.46:133,14,0	0/0:13,0:13:12:0,12,130	1/1:7,11:19:18.35:178,18,0	1/1:11,8:18:6.02:65,6,0	1/1:9,0:15:5.64:27,6,0	0/0:11,0:11:0.47:0,0,1	1/1:20,0:23:8.52:42,9,0	1/1:12,0:26:21.66:102,22,0	./.	0/1:9,7:16:35.73:56,0,36	1/1:7,6:14:11.63:112,12,0	1/1:9,12:21:15.04:164,15,0	0/1:15,0:22:2.54:98,0,3	1/1:15,11:24:5.96:231,6,0	1/1:18,8:26:1.72:147,2,0	1/1:2,4:7:11.87:112,12,0
chr10	24437147	.	ATCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	A	2785.80	PASS	AB=0.843;AC=33;AF=0.589;AN=56;BaseQRankSum=2.530;DP=575;FS=0.667;HRun=0;HaplotypeScore=272.8017;InbreedingCoeff=0.5253;MQ=62.69;MQ0=60;MQRankSum=-4.663;QD=9.29;ReadPosRankSum=-0.467;VQSLOD=2.2670;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:21:21.07:0,21,839	1/1:2,4:6:2.98:21,3,0	0/0:45,0:9:0.71:0,1,169	0/0:73,0:22:10.74:0,11,143	1/1:3,15:14:2.97:20,3,0	1/1:9,15:20:2.98:21,3,0	1/1:14,0:11:11.88:81,12,0	0/0:10,0:7:11.88:0,12,81	0/0:19,0:19:26.30:0,26,1436	1/1:7,7:14:9.03:622,9,0	1/1:1,10:10:2.97:20,3,0	1/1:4,12:14:5.93:40,6,0	1/1:9,7:12:2.97:20,3,0	1/1:3,8:11:5.98:219,6,0	1/1:7,7:12:2.97:20,3,0	1/1:16,1:16:23.95:467,24,0	0/0:20,0:18:30.52:0,31,1629	0/0:10,0:7:12.04:0,12,733	0/0:16,0:11:21.05:0,21,912	0/0:20,0:20:32.25:0,32,1128	0/0:33,0:26:41.55:0,42,2269	1/1:6,11:15:5.45:37,5,0	0/1:18,1:15:99:112,0,478	1/1:10,20:29:4.32:30,4,0	1/1:7,10:16:2.97:20,3,0	1/1:22,0:15:29.77:219,30,0	0/1:6,16:19:0.03:792,0,0	0/1:12,0:8:99:211,0,228
chr10	24437185	.	C	CCGA	944.76	PASS	AB=0.931;AC=26;AF=0.520;AN=50;BaseQRankSum=4.782;DP=435;FS=3.719;HRun=0;HaplotypeScore=102.0408;InbreedingCoeff=0.4308;MQ=32.46;MQ0=60;MQRankSum=-3.399;QD=3.31;ReadPosRankSum=1.057;VQSLOD=1.7900;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:14:15.03:0,15,246	0/1:6,1:4:0:0,0,0	./.	./.	0/1:22,0:20:0.35:0,0,0	1/1:25,1:18:6.02:84,6,0	1/1:8,5:7:4.62:88,5,0	./.	0/0:16,0:14:15.60:0,16,265	1/1:12,1:9:11.96:133,12,0	0/1:14,0:13:0:0,0,0	0/1:18,1:14:0:0,0,0	1/1:10,2:12:9:104,9,0	1/1:14,1:13:8.75:101,9,0	0/0:18,1:12:3.01:0,3,55	1/1:7,3:5:8.96:127,9,0	0/0:13,0:11:12.03:0,12,175	0/0:9,0:6:18.06:0,18,307	0/0:11,0:7:21.07:0,21,387	0/0:19,0:15:13.16:0,13,196	0/0:23,0:12:15.05:0,15,265	0/1:17,2:14:0.01:0,0,0	0/1:9,1:6:16.15:16,0,45	1/1:36,3:31:2.19:51,2,0	1/1:17,2:14:3.01:55,3,0	1/1:7,1:4:3.01:63,3,0	0/1:23,1:22:22.59:158,0,23	0/1:9,1:3:44.99:116,0,45
chr10	24437205	.	CTGTG	C	3857.97	PASS	AB=0.862;AC=34;AF=0.680;AN=50;BaseQRankSum=-2.832;DP=529;FS=1.001;HRun=0;HaplotypeScore=113.0277;InbreedingCoeff=0.6079;MQ=36.35;MQ0=57;MQRankSum=0.475;QD=9.94;ReadPosRankSum=-2.848;VQSLOD=2.5847;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:16:20.82:0,21,153	1/1:6,1:5:3.01:43,3,0	./.	./.	0/0:23,2:25:4.84:0,5,32	1/1:27,3:23:24:334,24,0	0/1:16,2:10:25.04:41,0,25	./.	0/0:14,0:11:1.65:0,2,34	1/1:14,1:12:12.04:188,12,0	1/1:18,4:21:26.79:382,27,0	1/1:22,2:21:11.48:187,11,0	1/1:12,2:15:24.08:333,24,0	1/1:13,5:15:12.04:166,12,0	0/1:22,6:22:64.21:220,0,64	1/1:5,16:14:6.02:93,6,0	0/0:13,0:11:6.49:0,6,71	0/0:10,0:6:11.81:0,12,94	0/0:13,0:7:14.84:0,15,216	0/0:19,0:17:14.10:0,14,156	1/1:17,0:8:0.52:1,1,0	1/1:13,5:15:17.98:215,18,0	1/1:7,12:13:9.03:131,9,0	1/1:37,8:36:26.66:391,27,0	1/1:15,6:17:18.06:246,18,0	1/1:19,0:15:30.55:422,31,0	1/1:27,4:29:17.57:379,18,0	1/1:8,4:5:6.02:84,6,0
chr10	24438249	.	AT	A	8134.68	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=10.779;DP=505;FS=1.191;HRun=8;HaplotypeScore=55.1030;InbreedingCoeff=0.9931;MQ=79.48;MQ0=0;MQRankSum=-1.136;QD=24.80;ReadPosRankSum=4.001;VQSLOD=5.4808;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:39.12:0,39,471	1/1:0,15:15:45.07:435,45,0	0/0:17,0:17:10.69:0,11,240	0/0:14,0:14:28.88:0,29,279	1/1:1,26:27:75.12:724,75,0	1/1:2,26:28:75.07:715,75,0	1/1:1,12:13:33.05:319,33,0	0/0:33,0:33:78.21:0,78,914	0/0:15,0:15:45.14:0,45,543	1/1:3,15:18:45.03:426,45,0	1/1:4,14:18:42.06:405,42,0	1/1:2,12:14:33.05:318,33,0	1/1:3,15:18:42.06:405,42,0	1/1:3,14:17:42.06:406,42,0	1/1:1,12:13:36.05:348,36,0	1/1:2,21:23:29.86:572,30,0	0/0:18,0:18:54.16:0,54,641	0/0:11,0:11:29.43:0,29,320	0/0:22,0:22:60.16:0,60,703	0/0:18,0:18:54.15:0,54,633	0/0:14,0:14:39.11:0,39,461	1/1:1,8:9:24.04:232,24,0	1/1:0,13:13:39.06:377,39,0	1/1:3,13:16:36.06:348,36,0	1/1:4,15:19:39.06:376,39,0	1/1:3,22:25:66.07:629,66,0	1/1:2,29:31:81.12:782,81,0	1/1:0,11:11:33.05:319,33,0
chr10	24438393	.	AAAC	A	2877.19	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=10.308;DP=419;FS=2.352;HRun=0;HaplotypeScore=58.6272;InbreedingCoeff=0.9618;MQ=69.05;MQ0=0;MQRankSum=-2.612;QD=32.70;ReadPosRankSum=-0.565;VQSLOD=3.2566;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:27.08:0,27,522	0/0:2,0:2:6.02:0,6,110	0/0:6,0:6:9.03:0,9,182	0/0:11,0:10:18.06:0,18,379	0/0:23,0:23:69.24:0,69,1482	0/0:21,0:21:51.17:0,51,1057	0/0:10,0:10:24.08:0,24,515	0/0:21,0:21:51.16:0,51,923	1/1:0,12:12:27.09:418,27,0	0/0:19,0:19:51.17:0,51,1059	0/0:22,0:22:57.19:0,57,1224	0/0:12,0:12:36.12:0,36,765	0/0:12,0:12:30.10:0,30,636	0/0:17,0:17:45.15:0,45,939	0/0:13,0:13:39.13:0,39,756	0/0:12,0:12:36.12:0,36,719	1/1:4,7:11:21.07:325,21,0	1/1:3,8:11:21.07:313,21,0	1/1:5,13:18:42.10:593,42,0	1/1:1,21:22:60.20:911,60,0	1/1:2,12:14:33.11:503,33,0	0/0:18,0:18:54.18:0,54,1130	0/0:18,0:18:51.17:0,51,1040	0/0:6,0:6:18.04:0,18,346	0/0:19,0:19:54.18:0,54,1121	0/0:28,0:28:81.28:0,81,1706	0/0:18,0:18:48.16:0,48,1004	0/0:13,0:13:39.13:0,39,838
chr10	24439281	.	T	TC	2415.97	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-8.981;DP=606;FS=1.115;HRun=0;HaplotypeScore=56.2861;InbreedingCoeff=0.9691;MQ=67.91;MQ0=0;MQRankSum=-0.722;QD=41.65;ReadPosRankSum=-2.284;VQSLOD=3.1942;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,28:29:78.27:1244,78,0	0/0:13,0:13:39.13:0,39,546	0/0:15,0:13:36.12:0,36,492	0/0:10,0:10:29.76:0,30,374	0/0:33,0:33:96.31:0,96,1325	0/0:22,0:22:66.22:0,66,923	0/0:11,0:11:33.11:0,33,461	1/1:0,29:28:84.26:1294,84,0	0/0:23,0:23:69.19:0,69,914	0/0:28,0:28:84.27:0,84,1161	0/0:25,0:25:72.23:0,72,992	0/0:13,0:13:33.11:0,33,461	0/0:20,0:20:60.20:0,60,839	0/0:20,0:20:60.20:0,60,839	0/0:29,0:29:87.28:0,87,1198	0/0:23,0:23:69.23:0,69,965	0/0:15,0:15:45.15:0,45,629	0/0:27,0:27:75.22:0,75,1029	0/0:13,0:13:36.12:0,36,503	0/0:46,0:46:99:0,138,1894	0/0:18,0:18:51.15:0,51,680	0/0:13,0:13:39.13:0,39,545	0/0:28,0:28:81.25:0,81,1100	0/0:8,0:8:24.08:0,24,334	0/0:21,0:21:63.21:0,63,881	0/0:33,0:33:96.31:0,96,1313	0/0:38,0:38:99:0,111,1441	0/0:3,0:3:9.03:0,9,126
chr10	24440843	.	T	TA	1441.65	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-10.000;DP=417;FS=1.951;HRun=8;HaplotypeScore=49.9228;InbreedingCoeff=0.9578;MQ=76.58;MQ0=0;MQRankSum=-1.502;QD=25.74;ReadPosRankSum=-1.802;VQSLOD=3.7089;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,20:22:57.17:658,57,0	0/0:6,0:6:15.01:0,15,137	0/0:15,0:11:11.74:0,12,94	0/0:20,0:18:31.56:0,32,230	0/0:18,0:18:42.02:0,42,384	0/0:14,0:14:39.02:0,39,357	0/0:9,0:9:27.01:0,27,244	1/1:6,28:34:81.20:905,81,0	0/0:13,0:13:30.01:0,30,274	0/0:13,0:13:30:0,30,269	0/0:19,0:19:44.96:0,45,394	0/0:15,0:15:42:0,42,380	0/0:20,0:20:51.01:0,51,462	0/0:14,0:14:42.02:0,42,384	0/0:16,0:16:41.99:0,42,374	0/0:9,0:9:21:0,21,190	0/0:23,0:24:62.05:0,62,549	0/0:11,0:11:30.02:0,30,274	0/0:12,0:12:33.01:0,33,298	0/0:16,0:16:48.01:0,48,435	0/0:13,0:13:35.93:0,36,308	0/0:5,0:5:15.01:0,15,137	0/0:8,0:8:17.97:0,18,153	0/0:15,0:15:40.92:0,41,346	0/0:14,0:14:39.01:0,39,357	0/0:20,0:20:50.98:0,51,453	0/0:15,0:15:45.02:0,45,412	0/0:7,0:6:21.01:0,21,192
chr10	24441067	.	TTA	T	3623.62	PASS	AB=0.760;AC=36;AF=0.692;AN=52;BaseQRankSum=-5.826;DP=270;FS=0.000;HRun=0;HaplotypeScore=37.4580;InbreedingCoeff=0.6324;MQ=72.16;MQ0=1;MQRankSum=1.952;QD=19.17;ReadPosRankSum=1.828;VQSLOD=3.3430;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,0:2:3.01:37,3,0	1/1:0,2:2:6.02:75,6,0	./.	0/0:10,0:7:10.24:0,10,63	1/1:5,9:13:20.99:228,21,0	1/1:0,14:14:30.10:372,30,0	1/1:3,2:5:6.02:75,6,0	0/1:38,0:38:99:612,0,162	0/0:7,0:7:13.54:0,14,90	0/1:1,12:13:10.46:394,0,10	1/1:1,5:6:9.03:113,9,0	1/1:2,7:9:15.05:188,15,0	1/1:0,10:10:18.06:225,18,0	./.	1/1:2,0:2:3.01:37,3,0	1/1:3,0:3:6.02:74,6,0	0/0:12,0:12:27.33:0,27,175	0/0:9,0:9:16.29:0,16,103	0/0:11,0:11:15.77:0,16,208	0/0:8,0:8:11.44:0,11,117	0/0:12,0:12:19.88:0,20,186	1/1:3,1:4:5.99:58,6,0	1/1:2,5:7:9.03:111,9,0	1/1:1,0:1:3.01:37,3,0	1/1:5,13:19:20.90:239,21,0	1/1:7,8:15:24.07:297,24,0	1/1:5,10:15:21.07:263,21,0	1/1:1,9:10:15.05:188,15,0
chr10	24441075	.	A	ATATATG	691.93	PASS	AB=0.930;AC=11;AF=0.204;AN=54;BaseQRankSum=-5.936;DP=251;FS=5.926;HRun=0;HaplotypeScore=63.7423;InbreedingCoeff=0.3000;MQ=67.82;MQ0=1;MQRankSum=2.789;QD=8.24;ReadPosRankSum=-3.413;VQSLOD=0.0991;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:1,0:1:2.80:13,3,0	0/0:2,0:2:6.02:0,6,83	0/1:9,0:5:0:0,0,0	0/0:8,0:5:14.14:0,14,132	0/0:12,0:11:23.93:0,24,267	0/0:16,0:16:36.07:0,36,445	0/0:4,0:4:9.02:0,9,107	0/1:19,20:41:99:608,0,133	0/0:7,0:7:15.05:0,15,322	0/1:14,0:14:40.77:41,0,403	0/0:6,0:6:9.03:0,9,123	0/0:8,0:8:18.05:0,18,231	0/0:10,0:10:17.79:0,18,219	./.	1/1:1,0:1:3.01:37,3,0	1/1:3,0:3:5.75:50,6,0	0/0:12,0:12:30.10:0,30,636	0/0:8,0:8:21.07:0,21,475	0/0:8,0:8:21.05:0,21,355	0/0:6,0:6:12.04:0,12,231	0/0:10,0:10:21.07:0,21,414	0/0:4,0:4:6.02:0,6,98	0/0:6,0:6:9:0,9,105	0/1:2,0:2:17.95:31,0,18	0/0:15,0:15:21.07:0,21,291	0/1:13,0:13:47.49:47,0,155	0/0:14,0:14:24.06:0,24,312	0/0:10,0:10:18.05:0,18,232
chr10	24441083	.	GTA	G	965.49	PASS	AB=0.955;AC=17;AF=0.327;AN=52;BaseQRankSum=-2.439;DP=264;FS=8.694;HRun=0;HaplotypeScore=49.2900;InbreedingCoeff=0.5546;MQ=64.60;MQ0=1;MQRankSum=0.142;QD=10.85;ReadPosRankSum=2.443;VQSLOD=2.1059;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:2,0:2:0.47:0,0,1	0/1:2,0:2:0.58:1,0,7	./.	0/0:8,1:5:2.37:0,2,8	0/0:14,0:13:21.74:0,22,281	0/1:15,1:16:0.76:1,0,160	0/0:4,0:4:10.99:0,11,114	0/0:41,0:41:38.99:0,39,355	1/1:1,5:6:12.04:150,12,0	0/0:15,0:15:24.37:0,24,294	0/0:6,0:6:8.10:0,8,35	0/0:10,0:10:22.75:0,23,202	0/0:14,0:14:30.88:0,31,297	0/0:2,0:2:6.01:0,6,72	./.	0/0:4,0:4:6.02:0,6,90	1/1:2,12:14:24.08:300,24,0	1/1:1,5:7:17.89:201,18,0	1/1:4,6:10:18.03:204,18,0	1/1:2,4:6:6.02:75,6,0	1/1:1,8:9:12.04:150,12,0	0/1:3,0:3:6.72:15,0,7	0/1:4,1:5:4.78:30,0,5	0/0:4,0:4:9.03:0,9,138	0/0:13,0:13:19.44:0,19,91	0/1:11,0:11:5.77:6,0,122	0/0:11,0:11:21.30:0,21,123	0/0:17,1:18:7.48:0,7,224
chr10	24442063	.	GTA	G	843.92	PASS	AB=0.900;AC=3;AF=0.056;AN=54;BaseQRankSum=-5.819;DP=236;FS=0.808;HRun=0;HaplotypeScore=51.7830;InbreedingCoeff=0.2463;MQ=65.24;MQ0=1;MQRankSum=4.775;QD=22.21;ReadPosRankSum=-1.940;VQSLOD=3.0885;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:8,1:9:13.76:14,0,325	./.	0/0:7,0:6:5.49:0,5,54	0/0:20,0:8:6:0,6,61	0/0:2,0:7:8.55:0,9,54	0/0:3,0:8:11.66:0,12,86	0/0:0,0:2:5.97:0,6,47	1/1:4,25:29:75.23:932,75,0	0/0:6,0:6:9.03:0,9,150	0/0:3,0:11:17.75:0,18,143	0/0:4,0:12:5.80:0,6,39	0/0:2,0:5:8.75:0,9,65	0/0:2,0:7:12:0,12,106	0/0:5,0:10:11.54:0,12,77	0/0:1,0:6:9:0,9,80	0/0:2,0:6:11.87:0,12,92	0/0:8,0:8:21.06:0,21,349	0/0:13,0:13:30.10:0,30,488	0/0:14,0:14:27.09:0,27,449	0/0:14,0:14:33.10:0,33,491	0/0:7,0:7:15.03:0,15,223	0/0:1,0:2:2.97:0,3,20	0/0:1,0:1:2.98:0,3,21	0/0:2,0:3:2.80:0,3,13	0/0:0,0:7:14.85:0,15,121	0/0:0,0:6:5.06:0,5,41	0/0:3,0:13:20.35:0,20,171	0/0:0,0:2:3:0,3,27
chr10	24442400	.	T	TACACAC	1463.16	PASS	AB=1.000;AC=9;AF=0.173;AN=52;BaseQRankSum=-2.868;DP=376;FS=0.701;HRun=0;HaplotypeScore=93.1655;InbreedingCoeff=0.8084;MQ=80.42;MQ0=11;MQRankSum=-3.637;QD=21.21;ReadPosRankSum=-2.572;VQSLOD=2.5943;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:13.33:0,13,111	0/0:5,0:5:9.01:0,9,159	0/0:31,0:22:47.71:0,48,878	0/0:22,0:11:24.03:0,24,448	0/0:11,0:11:24.07:0,24,468	0/0:21,0:20:30.07:0,30,559	0/0:16,0:14:30.10:0,30,670	0/1:22,0:21:3.70:455,0,4	1/1:12,0:12:18.06:393,18,0	0/0:10,0:10:27.07:0,27,545	0/0:12,0:12:26.83:0,27,551	0/0:6,0:6:18.06:0,18,370	0/0:13,0:13:23.81:0,24,494	0/0:10,0:10:15.05:0,15,321	0/0:10,0:10:21.07:0,21,470	0/0:13,0:13:21.07:0,21,456	1/1:1,11:12:4.26:55,4,0	./.	1/1:11,0:11:24.06:463,24,0	1/1:12,0:11:12.04:249,12,0	./.	0/0:9,0:9:24.08:0,24,533	0/0:8,0:8:12.04:0,12,270	0/0:13,0:13:24.08:0,24,525	0/0:15,0:14:24.08:0,24,544	0/0:16,0:15:30.10:0,30,664	0/0:17,0:17:29.93:0,30,672	0/0:6,0:6:9:0,9,116
chr10	24442458	.	GCA	G	1987.36	PASS	AB=0.709;AC=27;AF=0.563;AN=48;BaseQRankSum=-0.812;DP=330;FS=22.320;HRun=0;HaplotypeScore=57.8949;InbreedingCoeff=0.1770;MQ=45.80;MQ0=40;MQRankSum=2.104;QD=7.92;ReadPosRankSum=-1.139;VQSLOD=1.0474;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:5,11:16:19.31:19,0,39	0/0:1,4:5:2.88:0,3,40	./.	./.	1/1:6,14:15:2.80:34,3,0	1/1:7,18:23:6.79:94,7,0	0/0:2,8:8:0:0,0,0	0/1:22,0:20:29.31:29,0,304	0/1:8,5:9:31.78:32,0,44	1/1:5,11:13:28.65:409,29,0	1/1:13,0:12:20.85:308,21,0	1/1:10,0:8:18.06:276,18,0	0/1:2,8:8:0:0,0,0	0/1:4,12:13:0:0,0,0	1/1:2,4:5:2.90:36,3,0	0/0:5,7:10:1.82:0,2,5	0/1:8,1:7:18.69:19,0,59	0/1:11,1:9:44.33:44,0,102	0/0:6,0:5:10.74:0,11,134	0/0:9,4:12:11.80:0,12,158	0/0:5,0:2:6.02:0,6,99	1/1:12,0:11:14.81:208,15,0	0/1:2,9:11:0.11:0,0,0	./.	1/1:5,8:9:3.01:36,3,0	0/1:5,14:16:6.12:505,0,6	1/1:0,7:7:6.02:78,6,0	./.
chr10	24442862	.	T	TACAC	9725.28	PASS	AB=0.842;AC=51;AF=0.911;AN=56;BaseQRankSum=3.730;DP=640;FS=3.731;HRun=0;HaplotypeScore=152.8802;InbreedingCoeff=0.7265;MQ=71.37;MQ0=15;MQRankSum=-4.504;QD=17.52;ReadPosRankSum=2.363;VQSLOD=4.6020;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:13,0:16:0:0,0,1	1/1:11,0:11:21.07:314,21,0	0/0:42,0:22:29.67:0,30,377	0/0:43,0:23:53.96:0,54,772	1/1:20,0:20:38.73:564,39,0	1/1:21,0:22:40.20:554,40,0	1/1:19,0:19:40.92:571,41,0	1/1:32,0:31:22.68:266,23,0	1/1:24,0:23:28.90:400,29,0	1/1:24,0:23:62.67:960,63,0	1/1:6,0:19:2.97:40,3,0	1/1:14,0:14:19.41:268,19,0	1/1:4,0:24:15.52:228,16,0	1/1:6,1:21:6.02:112,6,0	1/1:3,17:22:9.03:151,9,0	1/1:7,0:32:16.12:212,16,0	1/1:10,0:10:19.31:290,19,0	1/1:13,0:14:23.04:217,23,0	1/1:16,0:16:34.92:498,35,0	1/1:21,0:21:37.90:531,38,0	1/1:32,0:32:66.51:848,67,0	1/1:27,0:26:51.38:774,51,0	1/1:2,0:20:5.57:83,6,0	1/1:2,0:23:17.81:285,18,0	1/1:21,0:21:30.88:329,31,0	1/1:28,0:29:73.13:932,73,0	1/1:6,0:27:7.80:84,8,0	1/1:10,0:11:13.86:214,14,0
chr10	24443901	.	A	AT	16912.28	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-5.618;DP=574;FS=1.163;HRun=7;HaplotypeScore=50.3014;InbreedingCoeff=0.8911;MQ=68.72;MQ0=0;MQRankSum=-2.850;QD=30.47;ReadPosRankSum=3.555;VQSLOD=5.0856;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,19:19:51.16:616,51,0	1/1:4,12:16:33.10:399,33,0	0/0:9,0:9:15.48:0,15,141	0/0:10,0:10:7.59:0,8,61	1/1:5,26:31:69.13:798,69,0	1/1:2,18:20:54.17:652,54,0	1/1:1,18:19:48.15:580,48,0	1/1:2,31:33:93.25:1089,93,0	1/1:1,18:19:54.10:633,54,0	1/1:2,31:33:93.27:1112,93,0	1/1:3,15:18:39.12:471,39,0	1/1:3,11:14:33.10:399,33,0	1/1:0,22:22:60.18:725,60,0	1/1:1,16:17:48.14:570,48,0	1/1:4,29:32:78.24:942,78,0	1/1:3,13:16:39.12:471,39,0	1/1:1,15:16:28.92:458,29,0	1/1:2,20:22:48.15:580,48,0	1/1:1,10:11:30.09:362,30,0	1/1:2,32:34:96.22:1128,96,0	1/1:0,3:3:6.02:72,6,0	1/1:5,23:28:75.23:897,75,0	1/1:1,23:24:66.20:797,66,0	1/1:4,12:16:36.11:435,36,0	1/1:2,24:26:63.19:760,63,0	1/1:3,25:28:75.21:884,75,0	1/1:3,26:29:75.23:900,75,0	1/1:3,5:8:15.05:181,15,0
chr10	24446721	.	G	GC	16754.22	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-1.864;DP=526;FS=1.671;HRun=2;HaplotypeScore=98.1130;InbreedingCoeff=0.9377;MQ=64.98;MQ0=5;MQRankSum=-3.407;QD=35.50;ReadPosRankSum=3.532;VQSLOD=5.1218;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,31:31:78.26:1119,78,0	1/1:1,8:9:21.07:302,21,0	0/0:23,0:15:26.02:0,26,422	0/0:31,0:20:48.11:0,48,563	1/1:1,15:16:38.16:523,38,0	1/1:4,10:14:34.87:453,35,0	1/1:0,26:26:75.25:1064,75,0	1/1:2,28:29:82.20:1149,82,0	1/1:3,13:16:39.09:537,39,0	1/1:2,25:27:75.21:1079,75,0	1/1:0,5:5:15.05:204,15,0	1/1:5,19:24:51.17:717,51,0	1/1:4,11:15:39.10:525,39,0	1/1:0,18:18:48.16:690,48,0	1/1:3,18:21:45.15:633,45,0	1/1:1,22:23:63.21:900,63,0	1/1:0,19:19:57.19:819,57,0	1/1:1,10:11:33.11:466,33,0	1/1:0,13:13:39.12:544,39,0	1/1:1,15:16:39.13:544,39,0	1/1:1,20:22:48.16:679,48,0	1/1:1,22:23:56.75:806,57,0	1/1:2,14:16:45.07:604,45,0	1/1:1,23:24:45.05:648,45,0	1/1:0,20:19:45.15:634,45,0	1/1:3,15:19:45.15:640,45,0	1/1:0,11:11:27.09:388,27,0	1/1:0,2:2:6.02:86,6,0
chr10	24446728	.	C	CCACA	4481.09	PASS	AB=0.967;AC=42;AF=0.840;AN=50;BaseQRankSum=-2.788;DP=590;FS=5.006;HRun=0;HaplotypeScore=200.8129;InbreedingCoeff=0.2074;MQ=58.66;MQ0=18;MQRankSum=1.721;QD=9.49;ReadPosRankSum=-0.004;VQSLOD=4.0690;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:31:12.50:0,12,59	1/1:7,0:7:5.97:71,6,0	./.	./.	1/1:16,0:17:12.61:112,13,0	1/1:11,1:13:15.03:267,15,0	1/1:34,0:33:13.69:101,14,0	0/0:33,0:28:0:0,0,0	0/1:17,3:20:3.48:285,0,3	1/1:32,1:33:48.77:553,49,0	1/1:5,0:5:6:61,6,0	1/1:29,1:31:23.80:376,24,0	1/1:20,2:21:20.90:346,21,0	1/1:22,0:22:14.93:184,15,0	1/1:22,0:22:26.83:285,27,0	1/1:22,1:25:21:285,21,0	1/1:19,1:21:23.35:231,23,0	0/1:12,0:12:12.94:17,0,13	1/1:15,0:15:5.92:39,6,0	1/1:15,0:15:5.98:47,6,0	0/1:29,0:25:22.09:56,0,22	1/1:22,0:22:6:76,6,0	0/1:17,0:16:6.98:149,0,7	1/1:33,0:33:21.02:302,21,0	1/1:18,0:17:5.98:47,6,0	1/1:20,0:20:30.23:272,30,0	1/1:14,1:15:24:319,24,0	./.
chr10	24446809	.	C	CAA	6991.08	PASS	AB=0.761;AC=28;AF=0.500;AN=56;BaseQRankSum=-1.507;DP=624;FS=4.764;HRun=1;HaplotypeScore=152.4513;InbreedingCoeff=0.2490;MQ=53.14;MQ0=6;MQRankSum=5.837;QD=17.48;ReadPosRankSum=4.379;VQSLOD=2.7267;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:26:25.47:121,25,0	1/1:7,2:9:6.93:121,7,0	0/0:38,0:20:53.77:0,54,761	0/0:36,0:27:80.47:0,80,1134	1/1:17,6:23:22.48:386,22,0	0/1:15,7:22:35.20:353,0,35	0/1:21,6:27:87.79:330,0,88	0/0:26,0:25:36.37:0,36,407	0/0:15,0:15:42.13:0,42,557	0/1:20,1:21:53.47:277,0,53	1/1:9,8:17:42.05:455,42,0	0/1:15,8:23:31.73:498,0,32	0/1:12,6:18:39.97:345,0,40	1/1:9,12:22:1.54:580,2,0	0/1:16,11:27:24.36:560,0,24	0/1:3,8:17:11.20:309,0,11	0/0:21,0:21:51.17:0,51,696	0/0:18,0:20:54.09:0,54,707	0/0:20,0:20:53.95:0,54,709	0/0:19,0:19:50.72:0,51,615	0/0:29,0:28:41.66:0,42,554	1/1:14,2:16:17.27:225,17,0	0/1:24,9:33:13.71:556,0,14	0/1:13,14:27:31.14:609,0,31	1/1:11,6:17:26.34:352,26,0	0/1:22,2:24:18.39:310,0,18	1/1:9,9:19:28.26:416,28,0	1/1:7,4:11:15.16:190,15,0
chr10	24449051	.	GAGTTTTAT	G	23745.73	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=17.269;DP=539;FS=0.686;HRun=0;HaplotypeScore=174.0135;InbreedingCoeff=0.9906;MQ=71.64;MQ0=0;MQRankSum=-17.038;QD=72.84;ReadPosRankSum=5.767;VQSLOD=4.6228;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:66.23:0,66,2981	1/1:0,8:8:21.07:614,21,0	0/0:17,0:17:13.45:0,13,1766	0/0:17,0:17:51.18:0,51,2050	1/1:0,29:29:69.23:1909,69,0	1/1:1,24:25:69.24:2014,69,0	1/1:0,12:12:30.10:877,30,0	0/0:33,0:33:90.31:0,90,3740	0/0:15,0:15:45.15:0,45,2009	1/1:0,22:22:63.21:1782,63,0	1/1:1,23:24:57.20:1665,57,0	1/1:2,7:9:15.05:435,15,0	1/1:1,26:27:63.12:1842,63,0	1/1:0,19:19:57.20:1666,57,0	1/1:2,11:13:33.11:965,33,0	1/1:1,13:14:33.11:963,33,0	0/0:27,0:27:75.26:0,75,3233	0/0:21,0:21:60.21:0,60,2651	0/0:16,0:16:48.16:0,48,2082	0/0:29,0:29:84.29:0,84,3676	0/0:15,0:15:45.15:0,45,2029	1/1:0,19:19:42.14:1174,42,0	1/1:1,25:26:63.21:1842,63,0	1/1:1,5:6:15.05:438,15,0	1/1:0,19:19:48.16:1402,48,0	1/1:1,17:18:48.16:1351,48,0	1/1:1,27:28:74.86:2193,75,0	1/1:0,8:8:21.07:614,21,0
chr10	24449968	.	AAC	A	12390.24	PASS	AB=0.726;AC=36;AF=0.643;AN=56;BaseQRankSum=12.248;DP=560;FS=1.507;HRun=0;HaplotypeScore=83.0996;InbreedingCoeff=0.8673;MQ=76.37;MQ0=1;MQRankSum=-1.456;QD=32.52;ReadPosRankSum=5.345;VQSLOD=6.6424;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:40.47:0,40,880	1/1:1,8:8:18.02:237,18,0	0/0:21,0:18:51.12:0,51,703	0/0:21,0:18:51.67:0,52,623	1/1:5,37:41:99:1310,113,0	1/1:2,24:26:62.86:860,63,0	1/1:0,15:15:27.09:391,27,0	0/0:29,0:29:84.18:0,84,1313	0/1:9,1:10:13.39:13,0,373	1/1:0,24:24:69.19:945,69,0	1/1:0,14:14:36.03:472,36,0	1/1:4,17:21:60.19:837,60,0	1/1:1,23:24:60.17:832,60,0	1/1:2,13:15:35.79:489,36,0	1/1:1,17:18:47.80:640,48,0	0/1:3,16:19:0.02:598,0,0	0/0:23,0:23:66.16:0,66,1032	0/0:16,0:16:45.12:0,45,732	0/0:17,0:17:51.11:0,51,746	0/0:18,0:18:54.15:0,54,860	0/0:13,0:13:39.08:0,39,601	1/1:1,20:21:44.82:619,45,0	1/1:0,29:29:72.24:1042,72,0	1/1:0,4:4:9.03:130,9,0	1/1:0,29:29:72.24:1042,72,0	1/1:1,18:19:57.08:703,57,0	1/1:1,34:34:77.93:1097,78,0	1/1:0,7:7:9.03:130,9,0
chr10	24449969	.	AC	A	6494.90	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=14.684;DP=559;FS=0.702;HRun=1;HaplotypeScore=94.1726;InbreedingCoeff=0.9674;MQ=76.36;MQ0=1;MQRankSum=-1.920;QD=17.55;ReadPosRankSum=5.455;VQSLOD=5.2254;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:38.35:0,38,681	1/1:8,1:8:17.80:121,18,0	0/0:21,0:18:50.77:0,51,547	0/0:21,0:18:50.61:0,51,504	1/1:38,4:41:99:872,116,0	1/1:25,1:26:62.31:444,62,0	1/1:15,0:15:26.70:182,27,0	0/0:30,0:30:90.17:0,90,1100	0/0:10,0:10:9.78:0,10,306	1/1:24,0:23:68.37:497,68,0	1/1:14,0:14:35.58:240,36,0	1/1:19,1:20:59.43:420,59,0	1/1:24,0:24:59.34:408,59,0	1/1:14,1:15:35.65:265,36,0	1/1:17,1:18:47.53:346,48,0	1/1:17,2:19:10.70:327,11,0	0/0:22,0:22:66.06:0,66,801	0/0:15,0:15:45.13:0,45,576	0/0:17,0:17:51.10:0,51,605	0/0:18,0:18:54.14:0,54,684	0/0:13,0:13:39.07:0,39,478	1/1:20,1:21:44.55:325,45,0	1/1:29,0:29:71.21:485,71,0	1/1:4,0:4:8.90:61,9,0	1/1:29,0:29:71.21:485,71,0	1/1:18,1:19:56.55:409,57,0	1/1:34,1:34:77.19:547,77,0	1/1:7,0:7:8.90:61,9,0
chr10	24450909	.	T	TA	3497.89	PASS	AC=34;AF=0.654;AN=52;BaseQRankSum=-6.234;DP=258;FS=7.631;HRun=8;HaplotypeScore=29.9119;InbreedingCoeff=0.8532;MQ=71.15;MQ0=8;MQRankSum=-1.358;QD=25.16;ReadPosRankSum=1.886;VQSLOD=3.6708;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:45.02:0,45,411	1/1:1,7:8:15.04:173,15,0	0/0:5,0:4:5.70:0,6,45	0/0:13,0:8:7.99:0,8,53	1/1:2,12:14:30.09:346,30,0	1/1:2,7:9:18.05:208,18,0	1/1:0,2:2:6.02:69,6,0	0/0:17,0:14:42.02:0,42,381	0/0:2,0:2:6:0,6,55	1/1:1,10:11:29.30:318,29,0	1/1:2,12:13:36.11:415,36,0	1/1:1,4:5:12.03:136,12,0	1/1:1,2:3:6.02:69,6,0	1/1:2,6:8:15.04:173,15,0	1/1:0,6:5:9.03:104,9,0	1/1:0,4:4:9.03:104,9,0	0/0:22,0:22:60:0,60,542	0/0:18,0:18:33.01:0,33,373	0/0:18,0:17:42.02:0,42,384	0/0:6,0:6:12:0,12,110	./.	1/1:1,0:1:3.01:32,3,0	./.	1/1:1,5:6:15.04:173,15,0	1/1:2,10:12:30.09:346,30,0	1/1:4,7:10:21.06:242,21,0	1/1:2,9:11:21.06:242,21,0	1/1:0,14:14:30.09:346,30,0
chr10	24451165	.	GA	G	737.27	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.604;DP=575;FS=0.000;HRun=2;HaplotypeScore=99.4212;InbreedingCoeff=0.9947;MQ=81.21;MQ0=0;MQRankSum=-3.530;QD=32.06;ReadPosRankSum=-3.097;VQSLOD=2.4683;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,99,1462	0/0:13,0:13:39.13:0,39,583	0/0:14,0:14:39.13:0,39,584	0/0:16,0:16:36.12:0,36,521	0/0:22,0:22:66.19:0,66,963	0/0:27,0:27:78.24:0,78,1128	0/0:12,0:12:36.11:0,36,520	1/1:3,20:23:66.20:832,66,0	0/0:19,0:19:57.19:0,57,854	0/0:23,0:23:66.22:0,66,970	0/0:11,0:11:33.11:0,33,495	0/0:34,0:34:99:0,102,1510	0/0:20,0:20:57.19:0,57,840	0/0:27,0:27:81.27:0,81,1213	0/0:30,0:30:90.30:0,90,1349	0/0:25,0:25:75.25:0,75,1124	0/0:24,0:24:72.24:0,72,1077	0/0:12,0:12:33.11:0,33,493	0/0:20,0:20:60.19:0,60,881	0/0:18,0:18:45.15:0,45,674	0/0:27,0:27:81.27:0,81,1214	0/0:7,0:7:21.07:0,21,315	0/0:12,0:12:33.11:0,33,495	0/0:24,0:24:69.18:0,69,989	0/0:14,0:14:42.14:0,42,630	0/0:17,0:17:51.16:0,51,744	0/0:37,0:37:99:0,108,1593	0/0:13,0:13:39.13:0,39,585
chr10	24452959	.	A	ATTTTG	28078.72	PASS	AB=0.760;AC=50;AF=0.893;AN=56;BaseQRankSum=-7.078;DP=769;FS=0.806;HRun=0;HaplotypeScore=123.6745;InbreedingCoeff=0.5411;MQ=71.99;MQ0=5;MQRankSum=-5.600;QD=40.52;ReadPosRankSum=4.006;VQSLOD=4.5655;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:24:26.42:710,26,0	1/1:6,5:11:15.05:380,15,0	0/0:29,0:22:26.16:0,26,426	0/0:45,0:35:12.48:0,12,369	1/1:8,27:38:84.25:2159,84,0	1/1:14,20:34:66.23:1776,66,0	1/1:13,6:20:18.06:483,18,0	0/1:36,4:41:28.21:530,0,28	1/1:4,17:21:48.16:1339,48,0	1/1:19,10:30:36.10:909,36,0	1/1:12,11:25:42.10:1005,42,0	1/1:4,11:16:30.10:847,30,0	1/1:14,20:37:1.97:1363,2,0	1/1:11,18:29:48.16:1292,48,0	1/1:8,25:34:54.19:1536,54,0	1/1:9,13:22:27.09:768,27,0	1/1:11,19:32:42.14:1162,42,0	1/1:14,8:22:21.07:597,21,0	1/1:16,11:28:45.12:1165,45,0	1/1:16,17:33:54.15:1424,54,0	1/1:10,20:31:51.18:1424,51,0	1/1:8,10:18:30.06:710,30,0	1/1:7,18:26:48.12:1300,48,0	1/1:10,14:25:39.13:1059,39,0	1/1:9,16:28:42.14:1195,42,0	0/1:11,16:27:1.15:1324,0,1	1/1:13,21:35:4.81:1536,5,0	1/1:3,1:4:3.01:85,3,0
chr10	24452983	.	T	TGTTTC	18312.55	PASS	AB=1.000;AC=27;AF=0.482;AN=56;BaseQRankSum=11.701;DP=764;FS=14.109;HRun=0;HaplotypeScore=149.4762;InbreedingCoeff=-0.7859;MQ=74.63;MQ0=5;MQRankSum=-0.551;QD=27.05;ReadPosRankSum=13.482;VQSLOD=2.0831;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:2,23:26:34.36:976,34,0	0/1:13,0:13:99:234,0,111	0/0:38,0:30:61.58:0,62,922	0/0:48,0:36:14.85:0,15,579	0/1:47,0:47:99:1394,0,272	0/1:33,0:33:99:978,0,176	0/1:18,0:18:99:419,0,158	0/1:42,0:42:99:364,0,615	0/1:24,0:24:99:824,0,102	0/1:24,0:24:99:590,0,139	0/1:18,0:18:99:575,0,102	0/1:15,0:15:13.77:562,0,14	0/1:37,0:37:99:818,0,273	0/1:30,0:30:99:773,0,156	0/1:34,0:34:99:965,0,138	0/1:20,0:20:99:489,0,108	0/1:29,0:29:91.79:792,0,92	0/1:18,0:17:75.07:451,0,75	0/1:28,0:28:99:641,0,214	0/1:27,0:27:99:933,0,147	0/1:30,0:30:99:831,0,112	0/1:17,0:17:58.79:409,0,59	0/1:28,0:28:58.58:893,0,59	0/1:23,0:23:72.78:760,0,73	0/1:22,0:22:49.81:756,0,50	0/1:32,0:32:99:870,0,293	0/1:40,0:39:99:960,0,322	0/1:2,0:2:17.98:54,0,18
chr10	24453705	.	GAAAAA	G	7725.87	PASS	AB=0.633;AC=45;AF=0.804;AN=56;BaseQRankSum=3.078;DP=512;FS=0.000;HRun=19;HaplotypeScore=112.1429;InbreedingCoeff=0.3159;MQ=69.01;MQ0=6;MQRankSum=-0.862;QD=17.05;ReadPosRankSum=5.430;VQSLOD=0.6080;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,0:9:14.78:142,15,0	1/1:2,2:7:11.71:141,12,0	0/0:33,0:15:15.03:0,15,194	0/0:24,0:13:6:0,6,95	1/1:12,13:31:11.74:351,12,0	1/1:9,21:30:47.81:709,48,0	1/1:2,9:12:20.94:281,21,0	1/1:15,0:26:27.65:230,28,0	1/1:5,1:10:9.99:67,10,0	1/1:11,15:30:54.70:632,55,0	1/1:5,12:17:20.49:321,20,0	1/1:6,7:16:32.80:408,33,0	1/1:9,9:20:25.91:331,26,0	1/1:7,11:20:32.72:491,33,0	1/1:5,11:16:23.69:336,24,0	1/1:5,13:19:32.67:462,33,0	1/1:5,1:12:11.30:84,11,0	0/0:1,0:2:0:0,0,0	0/1:9,1:18:74.93:75,0,106	0/1:10,3:21:32.99:151,0,33	0/1:4,1:12:14.74:52,0,15	0/1:6,7:16:0.89:181,0,1	0/1:9,11:22:3.71:360,0,4	1/1:6,14:21:31.71:395,32,0	1/1:5,15:20:31.03:498,31,0	1/1:5,10:16:26.42:357,26,0	1/1:9,16:26:46.88:632,47,0	1/1:1,4:6:2.73:42,3,0
chr10	24454948	.	AT	A	83.28	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=0.529;DP=483;FS=1.314;HRun=8;HaplotypeScore=61.2973;InbreedingCoeff=0.9599;MQ=81.33;MQ0=0;MQRankSum=-2.553;QD=11.90;ReadPosRankSum=-1.054;VQSLOD=2.5388;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,6:7:18.02:174,18,0	0/0:9,0:9:27.08:0,27,321	0/0:16,0:16:33.09:0,33,383	0/0:14,0:14:30.06:0,30,342	0/0:34,0:34:90.26:0,90,1074	0/0:22,0:22:63.19:0,63,760	0/0:16,1:17:16.16:0,16,478	0/0:28,0:28:69.19:0,69,804	0/0:16,0:16:45.14:0,45,544	0/0:25,0:25:63.19:0,63,760	0/0:18,0:18:51.16:0,51,616	0/0:21,0:21:54.16:0,54,644	0/0:22,0:22:66.20:0,66,797	0/0:20,0:20:57.17:0,57,688	0/0:21,0:21:63.19:0,63,761	0/0:11,0:12:35.97:0,36,403	0/0:21,0:21:57.17:0,57,688	0/0:8,0:8:21.02:0,21,237	0/0:22,0:22:32.12:0,32,583	0/0:19,0:19:51.16:0,51,616	0/0:7,0:7:21.06:0,21,254	0/0:12,0:12:33.10:0,33,399	0/0:21,0:21:57.17:0,57,689	0/0:8,0:8:24.07:0,24,290	0/0:14,0:14:36.10:0,36,424	0/0:17,1:19:28.06:0,28,602	0/0:23,0:22:60.16:0,60,710	0/0:7,0:7:18.53:0,19,218
chr10	24454964	.	TA	T	992.23	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-1.520;DP=492;FS=1.554;HRun=2;HaplotypeScore=67.0766;InbreedingCoeff=0.9839;MQ=78.64;MQ0=0;MQRankSum=-0.586;QD=33.07;ReadPosRankSum=-4.325;VQSLOD=2.1244;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:8:24.08:0,24,360	0/0:10,0:10:30.10:0,30,450	0/0:11,0:11:33.11:0,33,465	0/0:13,0:13:30.09:0,30,424	0/0:32,0:32:96.33:0,96,1439	0/0:25,0:25:69.23:0,69,1032	0/0:15,0:15:45.15:0,45,674	1/1:0,30:30:87.24:1087,87,0	0/0:17,0:17:51.17:0,51,764	0/0:21,0:21:63.21:0,63,944	0/0:23,0:23:63.20:0,63,925	0/0:18,0:18:54.18:0,54,810	0/0:22,0:22:66.22:0,66,989	0/0:22,0:22:66.22:0,66,988	0/0:23,0:23:69.23:0,69,1034	0/0:18,0:18:54.18:0,54,807	0/0:16,0:16:48.16:0,48,719	0/0:7,0:7:18.06:0,18,270	0/0:25,0:25:72.23:0,72,1060	0/0:20,0:20:57.19:0,57,854	0/0:10,0:10:30.10:0,30,450	0/0:13,0:13:39.13:0,39,584	0/0:22,0:22:63.20:0,63,925	0/0:11,0:11:33.11:0,33,494	0/0:12,0:12:36.12:0,36,540	0/0:15,0:15:42.14:0,42,630	0/0:26,0:26:78.25:0,78,1148	0/0:7,0:7:21.07:0,21,315
chr10	24456389	.	TTTGG	T	15316.43	PASS	AB=1.000;AC=38;AF=0.679;AN=56;BaseQRankSum=13.352;DP=546;FS=0.414;HRun=0;HaplotypeScore=151.5780;InbreedingCoeff=0.8222;MQ=58.92;MQ0=1;MQRankSum=-11.260;QD=37.82;ReadPosRankSum=1.156;VQSLOD=5.0495;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:16:39.13:629,39,0	1/1:7,0:7:18.06:300,18,0	0/0:24,0:20:32.60:0,33,678	0/0:15,0:13:21.07:0,21,490	1/1:29,0:29:60.20:986,60,0	1/1:21,0:21:48.16:802,48,0	1/1:16,0:16:13.11:432,13,0	1/1:9,16:25:48.15:769,48,0	0/0:21,0:21:45.15:0,45,1112	1/1:28,0:28:48.16:780,48,0	1/1:13,1:14:33.11:538,33,0	1/1:22,0:22:57.19:948,57,0	1/1:25,0:25:60.10:967,60,0	1/1:16,0:16:39.13:652,39,0	1/1:25,0:24:60.21:997,60,0	0/1:18,0:18:26.05:701,0,26	0/0:22,0:22:42.14:0,42,1024	0/0:3,0:3:9.03:0,9,223	0/0:15,0:15:24.06:0,24,525	0/0:17,0:17:51.18:0,51,1254	0/0:24,0:24:63.22:0,63,1519	1/1:26,0:26:66.22:1085,66,0	1/1:18,0:18:45.15:748,45,0	0/1:7,0:7:16.20:138,0,16	1/1:28,0:28:66.23:1086,66,0	1/1:22,0:22:54.18:878,54,0	1/1:30,0:29:81.28:1350,81,0	1/1:12,0:12:21.86:532,22,0
chr10	24456391	.	TG	T	4618.31	PASS	AB=0.594;AC=31;AF=0.554;AN=56;BaseQRankSum=17.342;DP=544;FS=1.486;HRun=2;HaplotypeScore=155.2014;InbreedingCoeff=0.4879;MQ=57.99;MQ0=1;MQRankSum=-12.824;QD=12.32;ReadPosRankSum=5.779;VQSLOD=3.7849;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:4,12:16:12.72:219,0,13	1/1:1,6:7:20.48:122,20,0	0/0:25,0:21:53.32:0,53,796	0/0:15,0:13:33.05:0,33,439	1/1:8,22:30:50.04:398,50,0	1/1:5,14:19:15.18:242,15,0	0/1:8,9:17:62.35:125,0,62	0/0:24,0:24:10.19:0,10,252	0/0:21,0:21:60.17:0,60,851	0/1:14,13:27:36.71:261,0,37	1/1:4,10:14:9.04:162,9,0	1/1:6,17:23:24.62:295,25,0	0/1:8,19:27:10.77:276,0,11	0/1:3,13:16:10.01:160,0,10	1/1:4,20:23:42.20:310,42,0	0/1:5,13:18:0.70:236,0,1	0/0:21,0:21:57.19:0,57,829	0/0:3,0:3:9.03:0,9,135	0/0:16,0:16:45.13:0,45,629	0/0:18,0:18:54.16:0,54,770	0/0:26,0:26:78.23:0,78,1122	1/1:4,20:24:34.68:341,35,0	1/1:2,15:17:27.92:226,28,0	0/1:1,6:7:7.60:35,0,8	1/1:7,20:27:13.05:325,13,0	1/1:8,13:21:0.14:279,0,0	1/1:2,27:29:58.55:425,59,0	1/1:4,8:12:26.84:182,27,0
chr10	24456394	.	TTGG	T	8838.69	PASS	AB=0.699;AC=35;AF=0.625;AN=56;BaseQRankSum=16.540;DP=553;FS=0.331;HRun=0;HaplotypeScore=162.8927;InbreedingCoeff=0.5715;MQ=54.88;MQ0=1;MQRankSum=-12.658;QD=21.93;ReadPosRankSum=7.274;VQSLOD=4.1767;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,12:17:8.18:420,8,0	1/1:2,6:8:18.92:187,19,0	0/0:25,0:20:51.13:0,51,947	0/0:15,0:13:21.08:0,21,612	1/1:6,22:28:53.59:677,54,0	1/1:5,14:19:25.90:471,26,0	0/1:10,9:19:59.33:262,0,59	0/1:23,0:23:99:130,0,138	0/0:21,0:21:57.19:0,57,1267	0/1:13,13:26:23.38:454,0,23	1/1:3,10:13:16.48:297,16,0	1/1:8,17:25:24.71:569,25,0	1/1:8,19:27:15.91:551,16,0	1/1:4,13:17:1.98:342,2,0	1/1:5,20:24:36.04:576,36,0	0/1:5,13:18:32.66:421,0,33	0/0:20,0:20:60.06:0,60,1176	0/0:4,0:4:12.04:0,12,249	0/0:20,0:20:51.17:0,51,941	0/0:19,0:19:57.19:0,57,1313	0/0:26,0:26:78.25:0,78,1723	1/1:5,19:24:44.18:629,44,0	1/1:2,15:17:31.94:434,32,0	0/1:2,6:8:21.01:93,0,21	1/1:6,20:26:27.49:610,27,0	1/1:8,13:21:14.17:533,14,0	1/1:3,27:30:71.47:854,71,0	1/1:4,8:12:27.32:330,27,0
chr10	24456586	.	C	CA	4017.97	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-13.357;DP=680;FS=7.626;HRun=6;HaplotypeScore=68.5806;InbreedingCoeff=0.9954;MQ=66.47;MQ0=0;MQRankSum=0.143;QD=31.39;ReadPosRankSum=2.736;VQSLOD=4.2602;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:90.20:0,90,917	0/0:7,0:7:18.04:0,18,184	0/0:23,0:23:53.69:0,54,520	0/0:20,0:20:54.02:0,54,523	0/0:30,0:30:75.16:0,75,765	0/0:29,0:29:84.18:0,84,850	0/0:17,0:17:45.08:0,45,451	0/0:33,0:33:87.17:0,87,875	1/1:3,20:23:54.17:679,54,0	0/0:22,0:22:63.11:0,63,634	0/0:25,0:25:66.15:0,66,673	0/0:23,0:23:60.13:0,60,612	0/0:29,0:29:84.19:0,84,857	0/0:24,0:24:69.14:0,69,696	0/0:26,0:26:75.17:0,75,765	0/0:27,1:28:40.44:0,40,727	1/1:5,13:18:41.12:478,41,0	1/1:2,10:12:15.52:360,16,0	1/1:2,17:19:51.15:630,51,0	1/1:1,30:31:87.15:1041,87,0	1/1:4,21:25:66.21:830,66,0	0/0:27,0:27:75.16:0,75,764	0/0:23,0:23:66.13:0,66,665	0/0:26,0:26:75.17:0,75,765	0/0:34,0:34:96.22:0,96,979	0/0:22,0:22:57.13:0,57,582	0/0:34,0:34:93.21:0,93,948	0/0:16,0:16:48.11:0,48,490
chr10	24456709	.	AAG	A	1238.75	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.417;DP=573;FS=2.310;HRun=0;HaplotypeScore=84.0492;InbreedingCoeff=0.9817;MQ=78.89;MQ0=0;MQRankSum=1.239;QD=39.96;ReadPosRankSum=-5.528;VQSLOD=3.3132;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:63.22:0,63,1216	0/0:9,0:9:24.08:0,24,456	0/0:14,0:14:39.13:0,39,697	0/0:14,0:14:18.61:0,19,602	0/0:32,0:32:90.31:0,90,1735	0/0:22,0:22:66.21:0,66,1229	0/0:11,0:11:33.11:0,33,630	1/1:0,31:31:93.25:1334,93,0	0/0:18,0:18:48.16:0,48,919	0/0:26,0:26:72.21:0,72,1335	0/0:14,0:14:42.14:0,42,811	0/0:16,0:16:45.15:0,45,869	0/0:24,0:24:72.25:0,72,1377	0/0:20,0:20:60.21:0,60,1157	0/0:25,0:25:69.24:0,69,1301	0/0:20,0:20:57.19:0,57,1094	0/0:14,0:14:39.13:0,39,752	0/0:7,0:7:18.06:0,18,347	0/0:23,0:23:69.24:0,69,1320	0/0:25,0:25:72.22:0,72,1312	0/0:16,0:16:48.13:0,48,860	0/0:29,0:29:84.29:0,84,1592	0/0:26,0:26:75.26:0,75,1429	0/0:9,0:9:27.09:0,27,505	0/0:27,0:27:72.16:0,72,1300	0/0:31,0:31:87.30:0,87,1666	0/0:37,0:37:99:0,108,2028	0/0:12,0:12:36.12:0,36,694
chr10	24457334	.	AAGAT	A	8652.25	PASS	AB=0.878;AC=47;AF=0.870;AN=54;BaseQRankSum=-5.046;DP=486;FS=0.000;HRun=0;HaplotypeScore=140.5771;InbreedingCoeff=0.3818;MQ=56.54;MQ0=7;MQRankSum=4.814;QD=18.89;ReadPosRankSum=5.266;VQSLOD=4.3099;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:11:2.84:0,3,14	1/1:4,2:6:12.51:185,13,0	0/0:11,0:3:2.97:0,3,20	0/1:8,0:7:0:0,0,0	1/1:29,1:30:29.86:381,30,0	1/1:23,4:27:52.95:701,53,0	1/1:11,0:11:12:148,12,0	1/1:33,0:33:12.83:147,13,0	1/1:9,6:15:36.11:548,36,0	1/1:25,0:25:26.91:517,27,0	1/1:28,2:30:45.09:604,45,0	1/1:10,2:12:12:244,12,0	1/1:24,0:24:16.79:362,17,0	1/1:15,2:17:33.02:379,33,0	1/1:18,5:23:29.71:421,30,0	1/1:16,3:19:40.75:563,41,0	1/1:10,3:12:15.05:239,15,0	0/1:5,1:6:42.86:87,0,43	1/1:12,1:13:7.32:185,7,0	1/1:25,4:29:54.12:842,54,0	./.	1/1:9,1:10:14.94:200,15,0	1/1:17,4:21:27.08:393,27,0	1/1:5,0:5:3.01:38,3,0	1/1:28,2:30:41.35:516,41,0	1/1:17,2:19:43.73:537,44,0	1/1:23,2:25:22.40:312,22,0	0/1:5,2:7:17.10:100,0,17
chr10	24457354	.	TAG	T	85.22	PASS	AB=0.986;AC=16;AF=0.296;AN=54;BaseQRankSum=4.816;DP=488;FS=2.619;HRun=0;HaplotypeScore=171.9588;InbreedingCoeff=-0.1082;MQ=47.69;MQ0=11;MQRankSum=5.572;QD=0.37;ReadPosRankSum=9.954;VQSLOD=1.5585;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:9:7.54:0,8,129	1/1:7,0:7:4.71:12,5,0	0/0:16,0:4:6.02:0,6,100	0/0:13,0:3:0.70:0,1,39	0/0:30,0:30:10.86:0,11,220	0/0:31,0:31:3.38:0,3,184	0/0:10,0:9:4.22:0,4,67	0/0:33,0:33:81.05:0,81,955	0/1:15,0:15:25.50:26,0,38	0/1:18,1:19:9.20:9,0,227	0/1:26,4:30:7.41:7,0,48	0/1:12,0:12:7.40:7,0,10	0/0:19,0:19:25.77:0,26,301	0/0:19,0:19:11.56:0,12,136	0/1:25,0:25:3.90:4,0,83	0/1:18,0:18:12.72:13,0,51	1/1:12,0:11:8.93:25,9,0	0/1:6,0:5:0.91:1,0,91	0/1:10,0:10:30.70:31,0,99	0/1:32,0:32:41.44:41,0,121	./.	0/1:8,0:8:1.28:1,0,59	0/1:18,0:18:2.25:2,0,124	0/0:9,0:9:3.06:0,3,7	0/0:35,0:34:6.76:0,7,213	0/1:18,0:18:43.29:43,0,143	0/0:24,0:24:13.72:0,14,282	0/0:6,0:6:6.03:0,6,63
chr10	24457360	.	G	GAT	1798.47	PASS	AB=0.969;AC=35;AF=0.648;AN=54;BaseQRankSum=3.867;DP=482;FS=1.062;HRun=0;HaplotypeScore=178.4984;InbreedingCoeff=0.4715;MQ=46.82;MQ0=10;MQRankSum=7.275;QD=4.65;ReadPosRankSum=2.860;VQSLOD=3.1379;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:9:4.72:0,5,19	1/1:7,0:7:5.05:14,5,0	0/0:16,0:5:5.96:0,6,46	0/0:14,0:3:1.95:0,2,41	1/1:25,3:28:16.86:99,17,0	1/1:30,0:30:20.17:150,20,0	0/0:10,0:9:1.06:0,1,23	0/0:26,0:26:39.84:0,40,640	0/1:15,0:15:88.39:123,0,88	0/1:20,0:20:38.10:184,0,38	1/1:32,0:32:26.52:159,27,0	1/1:12,0:12:14.42:111,14,0	1/1:18,0:18:20.38:127,20,0	1/1:20,0:20:23.89:156,24,0	1/1:23,1:24:11.83:52,12,0	1/1:19,0:19:22.24:96,22,0	0/1:12,0:11:37.81:38,0,45	0/0:6,0:5:11.33:0,11,96	0/0:10,0:10:27.35:0,27,210	0/1:32,2:34:20.50:20,0,379	./.	1/1:7,0:7:7.51:21,8,0	1/1:16,0:16:15.64:95,16,0	0/1:8,1:9:0.72:2,0,1	1/1:37,1:37:30.33:187,30,0	1/1:20,0:20:21.77:173,22,0	1/1:20,0:20:16.44:84,16,0	1/1:4,2:6:11.79:84,12,0
chr10	24457364	.	GAT	G	449.78	PASS	AB=0.837;AC=16;AF=0.296;AN=54;BaseQRankSum=0.497;DP=458;FS=14.513;HRun=0;HaplotypeScore=176.0012;InbreedingCoeff=0.3701;MQ=46.17;MQ0=9;MQRankSum=0.912;QD=2.90;ReadPosRankSum=-1.264;VQSLOD=1.8128;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:7,4:9:9.42:104,9,0	1/1:4,3:7:1.62:3,2,0	0/0:15,0:4:4.22:0,4,87	0/0:13,0:2:2.39:0,2,45	0/0:19,7:26:4.26:0,4,16	0/0:24,5:29:11.69:0,12,45	0/0:6,3:8:4.86:0,5,34	0/0:23,0:23:43.14:0,43,729	1/1:13,1:14:11.85:65,12,0	0/1:18,1:19:2.19:2,0,104	0/0:26,5:31:1.90:0,2,6	0/1:8,4:12:1.35:11,0,1	0/0:15,1:16:19.73:0,20,92	0/0:14,4:18:6.83:0,7,18	0/0:19,6:25:5.55:0,6,29	1/1:13,4:17:3.67:6,4,0	1/1:9,3:11:10.18:65,10,0	0/0:5,0:4:3.07:0,3,55	0/1:9,2:11:91.68:119,0,92	0/1:22,8:32:39.18:56,0,39	./.	0/0:5,1:6:1.15:0,1,2	0/0:11,4:15:0.75:0,1,2	0/0:6,3:9:3.47:0,3,10	0/0:25,13:38:9.35:0,9,30	1/1:17,3:20:10.12:166,10,0	0/0:13,5:18:5.68:0,6,20	0/0:4,1:5:5.58:0,6,29
chr10	24457366	.	T	TAG	1247.48	PASS	AB=0.964;AC=38;AF=0.704;AN=54;BaseQRankSum=4.052;DP=468;FS=0.577;HRun=0;HaplotypeScore=178.2880;InbreedingCoeff=0.1168;MQ=45.29;MQ0=9;MQRankSum=2.056;QD=2.94;ReadPosRankSum=0.158;VQSLOD=2.7349;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:9,1:8:8.65:121,9,0	1/1:7,0:7:1.34:2,1,0	0/0:15,0:4:3.06:0,3,86	0/0:13,0:2:2.02:0,2,44	1/1:21,5:26:4.81:13,5,0	0/1:29,0:29:1.03:20,0,1	0/0:9,0:8:4.58:0,5,33	0/1:33,0:33:99:267,0,675	0/1:14,0:14:12.15:12,0,171	0/1:18,0:18:50.32:76,0,50	1/1:30,0:30:6.98:13,7,0	1/1:11,1:12:7.91:85,8,0	1/1:16,0:16:7.70:28,8,0	1/1:16,1:17:11.34:49,11,0	1/1:22,3:25:1.64:25,2,0	1/1:16,1:17:8.96:27,9,0	0/1:12,0:11:37.74:38,0,71	0/0:4,0:4:7.24:0,7,93	0/1:11,1:12:99:139,0,152	0/1:35,1:36:24.05:24,0,533	./.	1/1:6,0:6:3.70:8,4,0	1/1:15,0:15:6.98:23,7,0	0/1:7,2:9:1.20:1,0,3	1/1:36,1:36:12.21:33,12,0	1/1:17,3:20:35.76:315,36,0	1/1:17,1:18:6.48:16,6,0	1/1:3,2:5:6.17:59,6,0
chr10	24457406	.	GA	G	3486.51	PASS	AB=0.700;AC=22;AF=0.407;AN=54;BaseQRankSum=4.037;DP=490;FS=12.617;HRun=1;HaplotypeScore=207.8429;InbreedingCoeff=0.0807;MQ=48.28;MQ0=6;MQRankSum=3.023;QD=12.06;ReadPosRankSum=5.341;VQSLOD=0.9794;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:0.43:0,0,2	0/1:4,3:7:57.86:64,0,58	0/0:19,0:11:15.99:0,16,368	0/0:16,0:6:9.42:0,9,85	0/1:17,11:28:99:236,0,104	0/1:14,7:21:99:159,0,175	1/1:1,6:6:0.19:0,0,0	0/0:55,0:53:99:0,160,2410	0/0:12,0:12:11.74:0,12,179	1/1:17,10:27:33.47:675,33,0	1/1:18,10:28:22.92:299,23,0	0/1:4,6:10:50.83:51,0,76	0/0:7,2:9:8.66:0,9,78	0/1:10,6:16:99:168,0,120	0/0:10,9:19:7.72:0,8,65	0/1:4,8:12:67.15:67,0,93	0/0:7,0:7:6.02:0,6,91	0/0:5,0:5:15.05:0,15,225	0/0:19,0:17:51.03:0,51,721	0/0:28,0:28:17.60:0,18,265	./.	0/1:4,2:6:63.88:64,0,70	1/1:6,9:15:12:152,12,0	1/1:8,4:12:3.48:38,3,0	0/1:19,15:34:99:155,0,252	0/1:13,13:26:30.10:710,0,30	0/1:21,9:30:99:537,0,115	1/1:4,6:10:5.24:111,5,0
chr10	24457407	.	A	ATAG	6119.82	PASS	AB=0.993;AC=34;AF=0.630;AN=54;BaseQRankSum=1.560;DP=493;FS=4.355;HRun=0;HaplotypeScore=212.7805;InbreedingCoeff=0.5891;MQ=47.85;MQ0=6;MQRankSum=3.829;QD=18.32;ReadPosRankSum=5.042;VQSLOD=4.6189;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:10,0:10:0:0,0,0	1/1:6,0:6:3.88:104,4,0	0/0:18,0:11:18.04:0,18,395	0/0:16,0:6:8.94:0,9,85	1/1:27,3:30:20.73:393,21,0	1/1:20,1:21:3.32:260,3,0	0/1:7,0:6:0.30:1,0,0	0/0:55,0:53:99:0,156,2095	0/0:12,0:12:9.03:0,9,136	1/1:22,4:26:77.92:1322,78,0	1/1:20,8:28:23.72:429,24,0	1/1:10,0:10:2.29:113,2,0	1/1:5,5:10:11.93:241,12,0	0/1:18,0:18:47.31:233,0,47	1/1:18,1:19:6.69:57,7,0	1/1:11,0:11:6.56:117,7,0	0/0:7,0:7:5.93:0,6,41	0/0:5,0:5:15.03:0,15,201	0/0:18,0:16:47.59:0,48,558	0/0:26,0:26:10.73:0,11,146	./.	1/1:6,0:6:6.24:113,6,0	1/1:17,0:17:12.04:229,12,0	1/1:11,1:12:2.46:52,2,0	0/1:33,1:33:85.59:256,0,86	1/1:26,0:26:74.48:1129,74,0	1/1:33,0:33:18.09:824,18,0	1/1:8,2:10:15.05:245,15,0
chr10	24457413	.	A	AG	3712.98	PASS	AB=0.839;AC=32;AF=0.593;AN=54;BaseQRankSum=2.774;DP=482;FS=2.258;HRun=0;HaplotypeScore=208.6883;InbreedingCoeff=0.4995;MQ=48.89;MQ0=6;MQRankSum=3.895;QD=11.86;ReadPosRankSum=4.349;VQSLOD=4.0767;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:0.47:0,0,1	1/1:3,3:6:6.42:50,6,0	0/0:19,0:12:31.12:0,31,365	0/0:16,0:7:10.53:0,11,119	1/1:16,10:26:23.68:231,24,0	1/1:8,11:19:24.04:297,24,0	1/1:7,0:6:0.80:2,1,0	0/0:51,0:49:99:0,125,1581	0/0:14,0:14:11.71:0,12,131	0/1:16,10:26:23.72:438,0,24	1/1:20,9:29:23.73:217,24,0	1/1:9,2:11:6.90:78,7,0	0/1:11,0:11:24.37:34,0,24	0/1:12,4:16:21.25:153,0,21	1/1:12,7:19:5.34:96,5,0	1/1:8,1:9:6.12:56,6,0	0/0:7,0:7:5.99:0,6,62	0/0:4,0:4:12:0,12,145	0/0:18,0:16:47.90:0,48,562	0/0:26,0:26:4.69:0,5,126	./.	1/1:2,3:5:9:97,9,0	1/1:11,6:17:11.99:108,12,0	1/1:5,5:11:4.26:46,4,0	1/1:20,11:30:20.92:230,21,0	1/1:15,12:27:35.03:777,35,0	1/1:14,19:33:52.26:684,52,0	0/1:8,2:10:27.03:119,0,27
chr10	24457423	.	GGATATA	G	8647.22	PASS	AC=48;AF=0.923;AN=52;BaseQRankSum=-0.413;DP=451;FS=0.000;HRun=0;HaplotypeScore=192.6833;InbreedingCoeff=0.4386;MQ=50.58;MQ0=6;MQRankSum=0.570;QD=21.40;ReadPosRankSum=2.946;VQSLOD=3.8767;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,1:9:3.44:21,3,0	1/1:5,1:6:5.94:127,6,0	0/0:20,0:13:11.93:0,12,307	0/0:14,0:7:8.99:0,9,95	1/1:17,7:24:21.07:444,21,0	1/1:10,2:12:13.29:314,13,0	1/1:4,1:5:3.01:63,3,0	1/1:39,0:37:50.96:621,51,0	1/1:1,11:13:12:210,12,0	1/1:18,6:24:57.10:1117,57,0	1/1:21,7:28:30.09:596,30,0	1/1:5,7:12:3.01:61,3,0	1/1:5,6:11:3.01:58,3,0	1/1:9,5:14:14.79:317,15,0	1/1:14,3:17:2.41:63,2,0	1/1:6,4:10:8.64:190,9,0	./.	1/1:5,0:5:2.96:19,3,0	1/1:9,11:20:23.49:536,23,0	1/1:9,15:24:6.05:129,6,0	./.	1/1:2,2:4:6.02:127,6,0	1/1:9,7:16:14.85:303,15,0	1/1:10,3:13:2.97:62,3,0	1/1:18,11:29:20.50:443,21,0	1/1:17,9:27:66.22:1342,66,0	1/1:24,8:32:63.16:1237,63,0	1/1:5,5:10:14.98:247,15,0
chr10	24457426	.	TATAGATATAG	T	2265.32	PASS	AC=2;AF=0.037;AN=54;BaseQRankSum=-5.431;DP=438;FS=3.326;HRun=0;HaplotypeScore=228.6245;InbreedingCoeff=0.4236;MQ=53.13;MQ0=3;MQRankSum=-1.784;QD=59.61;ReadPosRankSum=-3.721;VQSLOD=2.6715;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:5.04:0,5,112	0/0:6,0:6:5.85:0,6,35	0/0:21,0:15:36.29:0,36,998	0/0:13,0:8:15.52:0,16,333	0/0:24,0:24:29.40:0,29,289	0/0:13,0:13:20.70:0,21,204	0/0:4,0:4:2.87:0,3,18	1/1:3,35:38:99:2359,105,0	0/0:13,0:13:14.49:0,14,189	0/0:23,0:23:64.55:0,65,596	0/0:27,0:27:35.27:0,35,326	0/0:12,0:12:7.29:0,7,133	0/0:9,0:9:6:0,6,82	0/0:14,0:14:14.69:0,15,88	0/0:16,0:16:5.95:0,6,76	0/0:10,0:10:14.83:0,15,169	0/0:5,0:5:4.82:0,5,36	0/0:5,0:5:10.58:0,11,182	0/0:20,0:20:47.56:0,48,609	0/0:23,0:23:17.76:0,18,270	./.	0/0:5,0:5:8.88:0,9,91	0/0:16,0:16:17.77:0,18,159	0/0:13,0:13:2.77:0,3,19	0/0:27,0:26:26.37:0,26,240	0/0:24,0:24:70.81:0,71,535	0/0:32,0:32:62.10:0,62,461	0/0:10,0:10:25.72:0,26,292
chr10	24458673	.	T	TCAC	596.91	PASS	AB=1.000;AC=12;AF=0.214;AN=56;BaseQRankSum=11.302;DP=576;FS=14.420;HRun=0;HaplotypeScore=91.8301;InbreedingCoeff=-0.1678;MQ=51.18;MQ0=23;MQRankSum=-5.494;QD=2.97;ReadPosRankSum=3.012;VQSLOD=0.6267;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:10,17:28:0.04:293,0,0	0/1:9,0:9:60.75:61,0,146	0/0:58,0:15:9.63:0,10,345	0/0:68,0:15:39.21:0,39,463	0/0:15,0:15:22.33:0,22,378	0/1:15,0:15:7.68:8,0,259	0/0:18,0:18:4.47:0,4,231	0/0:14,0:12:33.04:0,33,418	0/0:26,0:26:72.17:0,72,1066	0/1:19,0:19:34.98:35,0,367	0/0:12,0:11:13.60:0,14,183	0/0:27,0:26:25.30:0,25,672	0/1:24,0:24:47.93:48,0,173	0/0:23,0:23:11.60:0,12,443	0/1:26,0:26:29.87:30,0,449	0/0:18,0:18:31.89:0,32,440	0/0:15,0:15:19.19:0,19,579	0/0:8,0:8:20.96:0,21,266	0/0:13,0:11:29.85:0,30,403	0/0:11,0:11:33.06:0,33,465	0/0:31,0:30:81.24:0,81,1279	0/0:9,0:8:17.55:0,18,239	0/0:9,0:8:5.72:0,6,197	0/1:28,0:28:65.82:66,0,445	0/1:6,0:6:16.41:16,0,123	0/1:20,0:19:43.48:43,0,234	0/1:23,0:23:99:124,0,243	0/1:3,0:3:18.52:19,0,38
chr10	24458676	.	T	TCACCAC	5807.35	PASS	AB=1.000;AC=39;AF=0.722;AN=54;BaseQRankSum=-0.264;DP=569;FS=0.670;HRun=0;HaplotypeScore=98.2567;InbreedingCoeff=0.5482;MQ=51.03;MQ0=25;MQRankSum=-3.561;QD=16.45;ReadPosRankSum=-0.002;VQSLOD=3.8534;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:28:21.05:246,21,0	1/1:9,0:9:12.03:266,12,0	0/0:58,0:14:11.96:0,12,116	0/0:69,0:17:11.13:0,11,196	1/1:8,6:15:8.78:99,9,0	1/1:7,8:16:5.61:170,6,0	1/1:15,0:15:8.99:80,9,0	0/1:13,0:11:23.35:23,0,89	0/0:24,0:24:48.12:0,48,830	1/1:8,9:17:18.06:516,18,0	./.	1/1:25,1:25:11.84:220,12,0	1/1:7,17:28:18.79:452,19,0	1/1:12,12:24:6.02:142,6,0	1/1:11,12:23:18.06:501,18,0	1/1:9,9:20:3.01:75,3,0	0/1:15,0:15:27.52:28,0,511	0/1:7,0:7:6.96:7,0,148	0/0:12,0:11:6.10:0,6,183	0/0:11,0:11:18.05:0,18,323	0/0:29,0:28:51.14:0,51,965	1/1:6,2:7:3.01:70,3,0	1/1:6,2:7:3.01:71,3,0	1/1:30,0:30:39.02:608,39,0	1/1:6,0:6:12.03:289,12,0	1/1:8,11:17:33.09:840,33,0	1/1:11,10:21:33.58:955,34,0	1/1:1,2:4:6.02:149,6,0
chr10	24458678	.	A	ACCACCA	5827.44	PASS	AB=1.000;AC=39;AF=0.722;AN=54;BaseQRankSum=-0.042;DP=570;FS=1.416;HRun=0;HaplotypeScore=101.0087;InbreedingCoeff=0.5507;MQ=49.77;MQ0=25;MQRankSum=-3.506;QD=16.46;ReadPosRankSum=-0.171;VQSLOD=3.8523;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:27:21.05:246,21,0	1/1:9,0:9:12.03:266,12,0	0/0:58,0:13:11.96:0,12,116	0/0:69,0:18:11.13:0,11,196	1/1:14,0:14:8.78:99,9,0	1/1:16,0:16:5.61:170,6,0	1/1:15,0:15:8.99:80,9,0	0/1:14,0:12:23.35:23,0,89	0/0:24,0:24:48.12:0,48,830	1/1:18,0:18:18.06:516,18,0	./.	1/1:17,8:26:12.32:221,12,0	1/1:27,0:27:18.79:452,19,0	1/1:23,0:23:6.02:142,6,0	1/1:24,0:24:18.06:501,18,0	1/1:20,0:20:3.01:75,3,0	0/1:15,0:15:27.52:28,0,511	0/1:7,0:7:6.96:7,0,148	0/0:11,0:11:6.10:0,6,183	0/0:11,0:11:18.05:0,18,323	0/0:29,0:28:51.14:0,51,965	1/1:8,0:7:3.01:70,3,0	1/1:8,0:7:3.01:71,3,0	1/1:28,0:29:39.02:608,39,0	1/1:7,0:7:14.98:308,15,0	1/1:20,0:18:33.09:840,33,0	1/1:19,0:20:33.58:955,34,0	1/1:5,0:5:6.02:149,6,0
chr10	24458695	.	C	CACCACC	5910.98	PASS	AB=1.000;AC=38;AF=0.704;AN=54;BaseQRankSum=0.000;DP=590;FS=2.254;HRun=0;HaplotypeScore=121.2332;InbreedingCoeff=0.6507;MQ=60.29;MQ0=18;MQRankSum=-3.500;QD=15.89;ReadPosRankSum=-1.839;VQSLOD=4.3173;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:25:21.93:248,22,0	1/1:7,0:7:12.03:266,12,0	0/0:41,0:14:11.96:0,12,116	0/0:55,0:21:10.67:0,11,195	1/1:14,0:14:8.78:99,9,0	1/1:21,0:21:5.61:170,6,0	1/1:10,7:18:5.98:47,6,0	0/1:22,0:20:23.35:23,0,89	0/0:26,0:26:48.12:0,48,830	1/1:28,0:27:18.06:516,18,0	./.	1/1:26,0:25:12.32:221,12,0	1/1:33,0:33:18.79:452,19,0	1/1:19,0:19:9.03:216,9,0	1/1:25,0:25:18.06:501,18,0	1/1:17,0:17:3.01:75,3,0	0/0:15,0:15:26.99:0,27,544	0/1:6,0:6:6.96:7,0,148	0/0:11,0:11:6.10:0,6,183	0/0:17,0:17:17.17:0,17,321	0/0:40,0:39:51.14:0,51,965	1/1:11,0:11:3.01:70,3,0	1/1:14,0:13:3.01:71,3,0	1/1:26,0:26:39.02:608,39,0	1/1:13,0:12:12.03:289,12,0	1/1:22,0:21:33.09:840,33,0	1/1:18,0:18:36.59:1028,37,0	1/1:6,0:6:8.92:165,9,0
chr10	24460293	.	GA	G	9897.55	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-1.704;DP=452;FS=1.322;HRun=9;HaplotypeScore=45.6316;InbreedingCoeff=0.8015;MQ=76.08;MQ0=0;MQRankSum=-4.427;QD=22.91;ReadPosRankSum=2.890;VQSLOD=5.4787;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,13:16:7.40:322,7,0	1/1:0,10:10:30.02:275,30,0	0/0:15,0:12:14.74:0,15,132	0/0:4,1:5:6.01:0,6,64	1/1:6,20:26:57.02:522,57,0	1/1:4,20:24:57.03:522,57,0	1/1:2,9:11:27.01:247,27,0	1/1:4,19:23:47.85:425,48,0	1/1:1,17:18:48.03:439,48,0	1/1:3,20:23:60:543,60,0	1/1:1,20:21:60.03:549,60,0	1/1:2,8:10:21.01:192,21,0	1/1:3,18:21:51.02:467,51,0	1/1:1,15:16:39.01:357,39,0	1/1:2,14:16:39.02:357,39,0	1/1:2,13:15:7.40:322,7,0	1/1:3,8:11:22.56:196,23,0	1/1:0,3:3:9:82,9,0	1/1:0,26:26:74.99:674,75,0	1/1:1,22:23:63.03:577,63,0	1/1:0,13:13:39.02:357,39,0	1/1:2,15:18:47:407,47,0	1/1:3,9:12:27.01:247,27,0	1/1:0,7:8:20.05:171,20,0	1/1:1,19:20:48.03:439,48,0	1/1:0,14:14:42.02:384,42,0	1/1:1,28:29:81.04:741,81,0	1/1:0,5:5:9:82,9,0
chr10	24460873	.	CTCTCTCTG	C	377.66	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=2.675;DP=690;FS=3.000;HRun=0;HaplotypeScore=160.1002;InbreedingCoeff=0.6137;MQ=65.88;MQ0=33;MQRankSum=-0.702;QD=2.30;ReadPosRankSum=-4.432;VQSLOD=1.4621;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:9.09:0,9,171	0/0:9,0:9:24.08:0,24,856	0/0:107,0:26:20.93:0,21,343	0/1:144,0:34:21.20:21,0,376	0/0:19,0:19:35.84:0,36,1224	0/0:32,0:32:63.25:0,63,2779	0/0:19,0:19:36.80:0,37,1410	1/1:6,13:18:35.93:462,36,0	0/0:6,0:6:18.06:0,18,725	0/0:18,0:18:51.17:0,51,1922	0/0:17,0:17:39.10:0,39,1258	0/0:18,0:18:29.15:0,29,1522	0/0:11,0:11:27.09:0,27,908	0/0:20,0:20:51.12:0,51,1633	0/0:10,0:10:23.89:0,24,973	0/0:12,0:12:33.11:0,33,1349	0/0:12,0:11:27.06:0,27,753	0/0:15,0:15:42.09:0,42,1464	0/0:28,0:27:69.15:0,69,1870	0/0:30,0:30:78.27:0,78,2927	0/0:16,0:16:27.08:0,27,902	0/0:10,0:10:30.09:0,30,1010	0/0:17,0:17:42.52:0,43,1483	0/0:24,0:24:57.19:0,57,2051	0/0:16,0:16:45.13:0,45,1590	0/0:26,0:26:69.21:0,69,2526	0/0:10,0:10:23.97:0,24,824	0/0:13,0:13:36.12:0,36,1129
chr10	24460898	.	TTC	T	1815.74	PASS	AB=0.944;AC=16;AF=0.286;AN=56;BaseQRankSum=2.916;DP=559;FS=0.000;HRun=0;HaplotypeScore=83.8151;InbreedingCoeff=0.5832;MQ=56.02;MQ0=21;MQRankSum=0.112;QD=11.49;ReadPosRankSum=1.003;VQSLOD=2.9185;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:8:4.57:0,5,11	0/1:7,1:8:12.60:13,0,245	0/0:47,0:5:3.01:0,3,48	0/0:72,0:13:2.88:0,3,15	0/0:18,0:18:11.93:0,12,448	0/0:29,1:30:44.57:0,45,1104	0/0:19,0:20:30.94:0,31,540	0/0:15,0:15:36.43:0,36,428	1/1:6,2:9:2.98:170,3,0	0/0:25,0:25:39.63:0,40,826	0/0:21,0:21:20.54:0,21,691	0/1:15,1:16:0.71:1,0,334	0/0:15,0:15:32.18:0,32,381	0/0:17,0:17:8.28:0,8,389	0/0:14,0:14:26.52:0,27,337	0/1:16,1:16:0.71:1,0,369	1/1:9,2:10:12.92:147,13,0	1/1:10,5:15:16.45:289,16,0	1/1:13,4:14:27.05:290,27,0	1/1:21,12:34:80.94:824,81,0	1/1:8,5:13:23.88:238,24,0	0/0:7,0:7:21.06:0,21,318	0/0:12,0:12:27.05:0,27,363	0/0:24,0:24:30.88:0,31,492	0/0:16,1:17:5.47:0,5,524	0/0:26,1:27:51.99:0,52,853	0/1:18,0:18:20.30:20,0,345	0/0:10,0:10:21.05:0,21,316
chr10	24460954	.	GTT	G	8305.38	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-7.656;DP=459;FS=5.412;HRun=12;HaplotypeScore=82.0150;InbreedingCoeff=0.8337;MQ=87.57;MQ0=4;MQRankSum=-2.947;QD=21.19;ReadPosRankSum=4.811;VQSLOD=4.5078;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,0:15:24.69:107,25,0	1/1:2,6:8:14.98:152,15,0	0/0:25,0:23:32.89:0,33,398	0/0:42,0:26:2.03:0,2,293	1/1:4,10:15:21.81:267,22,0	1/1:4,18:22:48.09:488,48,0	1/1:3,9:12:19.58:237,20,0	1/1:10,17:27:50.97:500,51,0	1/1:1,6:7:15.01:153,15,0	1/1:5,15:20:45.06:449,45,0	1/1:3,21:25:56.80:561,57,0	1/1:4,10:14:33.04:335,33,0	1/1:1,11:11:27.05:275,27,0	1/1:0,14:13:33.07:336,33,0	1/1:0,10:10:27.06:275,27,0	1/1:3,12:15:33.06:336,33,0	1/1:1,8:9:24.05:244,24,0	1/1:3,12:15:33.05:328,33,0	1/1:3,10:13:27.05:275,27,0	1/1:8,15:24:41.78:408,42,0	1/1:7,5:12:18.01:180,18,0	1/1:1,5:6:15.03:153,15,0	1/1:2,9:12:23.76:278,24,0	1/1:4,7:11:26.68:248,27,0	1/1:2,14:16:39.07:397,39,0	1/1:2,19:21:57.10:573,57,0	1/1:6,23:30:56.80:631,57,0	1/1:2,5:7:12:122,12,0
chr10	24461373	.	TA	T	311.13	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=5.460;DP=426;FS=3.399;HRun=8;HaplotypeScore=43.8145;InbreedingCoeff=0.6643;MQ=79.40;MQ0=0;MQRankSum=-2.634;QD=10.73;ReadPosRankSum=0.245;VQSLOD=1.5118;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,14:15:42.07:405,42,0	0/0:7,0:7:18.06:0,18,217	0/1:14,0:13:2.73:3,0,199	0/0:11,0:11:24.68:0,25,266	0/0:27,0:27:75.23:0,75,906	0/0:21,0:21:60.18:0,60,725	0/0:16,0:16:45.14:0,45,540	0/0:21,0:21:51.13:0,51,595	0/0:14,0:14:36.11:0,36,434	0/0:28,0:28:78.24:0,78,942	0/0:11,0:11:33.09:0,33,387	0/0:14,0:14:36.10:0,36,423	0/0:13,0:13:27.08:0,27,326	0/0:15,0:15:42.12:0,42,496	0/0:19,0:19:54.17:0,54,652	0/0:14,0:14:39.12:0,39,471	0/0:5,0:5:9.03:0,9,109	0/0:13,0:13:33.10:0,33,399	0/0:17,0:17:36.11:0,36,435	0/0:14,0:14:42.13:0,42,507	0/0:9,0:9:24.06:0,24,279	0/0:4,0:4:9.03:0,9,109	0/0:19,0:19:54.16:0,54,649	0/0:12,0:12:30.04:0,30,345	0/0:17,0:17:45.14:0,45,544	0/0:24,1:25:37.22:0,37,731	0/0:26,0:26:75.22:0,75,894	0/0:5,0:5:15.05:0,15,181
chr10	24461454	.	TTGTGTGTGTG	T	5913.84	PASS	AB=0.773;AC=37;AF=0.685;AN=54;BaseQRankSum=3.559;DP=447;FS=0.827;HRun=0;HaplotypeScore=125.6566;InbreedingCoeff=0.6481;MQ=57.89;MQ0=11;MQRankSum=-4.544;QD=19.26;ReadPosRankSum=3.200;VQSLOD=3.9794;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:21:5.69:81,6,0	1/1:7,5:13:9.03:237,9,0	1/1:32,0:10:2.04:6,2,0	0/0:32,0:12:3.01:0,3,43	1/1:9,15:23:27:526,27,0	1/1:10,4:14:6.02:179,6,0	0/1:12,5:17:99:170,0,115	0/0:24,0:22:30.08:0,30,769	0/0:7,0:13:3.48:0,3,131	1/1:16,8:24:16.60:369,17,0	1/1:3,10:17:20.15:695,20,0	./.	1/1:8,4:13:12.04:338,12,0	1/1:11,2:13:6.02:179,6,0	1/1:13,8:21:12.04:358,12,0	1/1:2,4:6:9.03:268,9,0	0/0:9,0:10:9.03:0,9,269	0/0:8,0:10:9.03:0,9,243	0/0:9,0:9:4.26:0,4,11	0/0:15,0:21:21.05:0,21,820	0/0:11,0:13:9.03:0,9,374	1/1:4,4:8:8.94:122,9,0	1/1:6,6:12:6.02:179,6,0	1/1:17,0:17:8.81:185,9,0	1/1:8,7:16:18.06:517,18,0	1/1:4,9:12:21.07:475,21,0	1/1:10,12:22:28.73:851,29,0	1/1:2,2:4:6.02:179,6,0
chr10	24462109	.	A	AT	12071.49	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-13.525;DP=575;FS=1.625;HRun=7;HaplotypeScore=47.1649;InbreedingCoeff=0.9804;MQ=79.93;MQ0=0;MQRankSum=-1.662;QD=29.16;ReadPosRankSum=2.018;VQSLOD=5.3834;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,20:26:57.17:687,57,0	1/1:0,10:10:30.09:362,30,0	0/0:15,0:15:24.02:0,24,230	0/0:18,0:18:38.82:0,39,357	1/1:4,17:21:47.97:527,48,0	1/1:3,26:29:72.22:866,72,0	1/1:2,11:13:36.09:422,36,0	1/1:3,23:26:72.15:836,72,0	0/0:18,0:18:51.08:0,51,492	1/1:2,25:27:78.22:928,78,0	1/1:2,18:19:54.16:647,54,0	1/1:0,17:17:42.13:507,42,0	1/1:2,17:19:45.14:544,45,0	1/1:3,22:25:57.17:689,57,0	1/1:3,20:23:48.15:580,48,0	1/1:1,16:17:19.17:515,19,0	0/0:18,0:18:45.04:0,45,428	0/0:6,0:6:15.02:0,15,144	0/0:35,0:35:93.14:0,93,898	0/0:27,0:27:75.12:0,75,724	0/0:24,0:24:72.09:0,72,688	1/1:6,12:18:36.11:435,36,0	1/1:3,19:23:60.18:722,60,0	1/1:3,18:21:54.12:636,54,0	1/1:4,13:17:7.13:370,7,0	1/1:2,18:20:54.17:651,54,0	1/1:3,25:28:78.23:932,78,0	1/1:0,13:13:18.06:217,18,0
chr10	24465236	.	T	TG	552.59	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-5.675;DP=257;FS=10.820;HRun=6;HaplotypeScore=32.5839;InbreedingCoeff=0.8246;MQ=81.56;MQ0=0;MQRankSum=0.259;QD=17.27;ReadPosRankSum=-0.428;VQSLOD=1.6979;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:48.11:0,48,489	0/0:3,0:3:6.01:0,6,61	0/0:18,0:18:33.15:0,33,287	0/0:14,0:10:14.58:0,15,138	0/0:15,0:15:36.06:0,36,359	0/0:11,0:11:33.01:0,33,324	0/0:11,0:11:27.06:0,27,275	0/0:23,0:23:54.58:0,55,546	1/1:0,3:3:6.02:75,6,0	0/0:4,0:4:12.02:0,12,118	0/0:6,0:6:15.03:0,15,153	0/0:10,0:10:27.03:0,27,261	0/0:7,0:7:18.02:0,18,176	0/0:2,0:2:6.01:0,6,61	0/0:7,0:7:15.02:0,15,146	0/0:8,0:8:24.05:0,24,245	1/1:3,2:5:3.01:38,3,0	1/1:1,3:4:6.02:75,6,0	1/1:2,8:10:21.07:262,21,0	1/1:0,3:3:6.02:75,6,0	1/1:2,5:7:15.05:189,15,0	0/0:13,0:13:36.06:0,36,360	0/0:12,0:12:36.08:0,36,367	0/0:12,0:12:36.08:0,36,367	0/0:5,0:5:15.02:0,15,147	0/0:9,0:9:21.05:0,21,214	0/0:11,0:11:29.99:0,30,281	0/0:5,0:5:15:0,15,144
chr10	24465330	.	T	TA	156.24	PASS	AC=2;AF=0.040;AN=50;BaseQRankSum=0.959;DP=149;FS=0.000;HRun=6;HaplotypeScore=36.8181;InbreedingCoeff=0.2786;MQ=60.92;MQ0=1;MQRankSum=-1.932;QD=17.36;ReadPosRankSum=1.675;VQSLOD=2.5085;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,8:9:21.02:246,21,0	0/0:3,0:3:6.01:0,6,61	0/0:11,0:6:18.02:0,18,175	0/0:10,0:9:21.01:0,21,204	0/0:3,0:3:5.50:0,6,40	0/0:3,0:3:9:0,9,84	0/0:2,0:2:6.01:0,6,56	0/0:26,0:26:60.04:0,60,584	0/0:3,0:3:6.01:0,6,61	0/0:4,0:4:12.03:0,12,122	0/0:4,0:4:9.01:0,9,86	0/0:4,0:4:6.01:0,6,61	0/0:3,0:3:6.01:0,6,61	0/0:2,0:2:3.01:0,3,31	0/0:4,0:4:3.48:0,3,32	0/0:1,0:1:2.99:0,3,24	0/0:10,0:10:17.50:0,18,153	0/0:3,0:3:6.01:0,6,61	./.	0/0:6,0:6:15.04:0,15,159	0/0:4,0:4:9.02:0,9,92	0/0:7,0:7:9.02:0,9,92	./.	./.	0/0:5,0:5:6.48:0,6,62	0/0:2,0:2:3:0,3,31	0/0:6,0:6:12.02:0,12,122	0/0:10,0:10:24.05:0,24,244
chr10	24465342	.	T	TTAATAATAATAA	4392.77	PASS	AB=0.900;AC=40;AF=0.870;AN=46;BaseQRankSum=-2.910;DP=145;FS=6.919;HRun=0;HaplotypeScore=53.5335;InbreedingCoeff=0.1507;MQ=58.71;MQ0=0;MQRankSum=-2.165;QD=34.86;ReadPosRankSum=2.626;VQSLOD=2.7335;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,0:9:17.97:222,18,0	1/1:2,1:4:6.02:231,6,0	0/0:9,0:6:3.01:0,3,91	0/0:7,0:5:4.67:0,5,45	1/1:1,1:3:3.01:175,3,0	1/1:1,2:4:9.03:388,9,0	./.	0/1:32,0:32:11.53:12,0,1051	1/1:2,0:2:3.47:26,3,0	1/1:6,0:6:4.26:178,4,0	1/1:4,0:4:5.96:45,6,0	1/1:2,0:2:3:25,3,0	1/1:1,1:2:3.01:175,3,0	1/1:3,0:3:6.02:103,6,0	1/1:1,2:4:3.01:175,3,0	./.	1/1:1,0:14:12.04:626,12,0	1/1:1,0:4:3.01:122,3,0	1/1:3,0:3:9.03:288,9,0	1/1:2,0:5:5.99:178,6,0	1/1:3,0:3:3:27,3,0	./.	./.	./.	1/1:1,1:5:3.01:175,3,0	1/1:1,0:1:0.47:1,0,0	0/1:3,1:4:11.98:169,0,12	1/1:1,8:11:18.06:1052,18,0
chr10	24465353	.	AATG	A	1785.44	PASS	AB=1.000;AC=18;AF=0.391;AN=46;BaseQRankSum=-8.041;DP=140;FS=0.762;HRun=0;HaplotypeScore=42.9673;InbreedingCoeff=-0.0193;MQ=56.83;MQ0=0;MQRankSum=3.479;QD=15.80;ReadPosRankSum=-6.605;VQSLOD=1.4288;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:10,0:9:21.81:22,0,64	0/0:3,0:3:4.15:0,4,24	0/0:4,0:2:3.01:0,3,69	0/0:5,0:5:7.68:0,8,108	0/1:4,0:4:3.64:40,0,4	0/1:5,0:5:17.14:17,0,35	./.	1/1:1,37:38:99:1443,111,0	1/1:2,0:2:5.94:43,6,0	0/1:4,0:4:6.06:65,0,6	0/1:7,0:7:16.21:39,0,16	1/1:2,0:2:6:53,6,0	0/0:1,0:1:2.98:0,3,21	0/0:3,0:3:3.99:0,4,19	0/0:3,0:3:4.48:0,4,21	./.	0/1:14,0:14:45.08:50,0,45	0/1:5,0:5:1.09:38,0,1	0/0:3,0:3:8.99:0,9,84	0/1:4,0:4:10.36:41,0,10	1/1:1,0:1:3:27,3,0	./.	./.	./.	0/1:5,0:5:2.25:21,0,2	0/0:2,0:2:1.69:0,2,29	0/0:2,0:2:5.99:0,6,73	0/1:12,0:12:25.27:25,0,89
chr10	24466147	.	G	GA	594.83	PASS	AB=0.879;AC=7;AF=0.125;AN=56;BaseQRankSum=-3.749;DP=518;FS=1.278;HRun=13;HaplotypeScore=60.5628;InbreedingCoeff=0.1347;MQ=61.53;MQ0=4;MQRankSum=0.477;QD=3.61;ReadPosRankSum=-2.375;VQSLOD=-0.2231;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:14,33:47:5.88:512,0,6	0/0:8,0:9:10.89:0,11,67	0/0:11,0:8:2.60:0,3,27	0/0:8,0:3:5.93:0,6,40	0/1:25,0:27:20.72:21,0,223	0/0:14,1:16:0.90:0,1,141	0/0:14,0:15:0.97:0,1,142	1/1:16,3:28:22.55:160,23,0	0/0:13,0:16:9.45:0,9,172	0/1:21,2:23:1.25:1,0,137	0/1:21,3:23:18.12:18,0,174	0/0:17,1:19:3.86:0,4,163	0/0:15,0:15:24.06:0,24,152	0/0:15,0:16:22.79:0,23,149	0/0:24,0:24:44.14:0,44,300	0/0:14,0:15:28.79:0,29,191	0/0:23,1:25:16.14:0,16,312	0/0:10,0:11:28.78:0,29,188	0/0:20,0:22:42.59:0,43,273	0/0:22,0:23:37.46:0,37,249	0/0:9,0:10:21.90:0,22,135	0/1:11,0:13:5.79:6,0,61	0/0:18,0:18:26.03:0,26,172	0/0:15,0:18:40.85:0,41,249	0/0:19,0:19:35.55:0,36,242	0/0:8,0:8:11.82:0,12,81	0/0:17,2:19:35.59:0,36,245	0/0:10,1:15:4.08:0,4,138
chr10	24466808	.	GC	G	491.87	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.138;DP=496;FS=2.281;HRun=1;HaplotypeScore=47.0492;InbreedingCoeff=0.9813;MQ=68.70;MQ0=0;MQRankSum=-1.725;QD=30.74;ReadPosRankSum=0.609;VQSLOD=3.3034;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,16:16:42.14:587,42,0	0/0:10,0:10:30.09:0,30,455	0/0:12,0:12:36.11:0,36,519	0/0:6,0:6:15.01:0,15,212	0/0:30,0:30:90.29:0,90,1408	0/0:24,0:24:69.21:0,69,1076	0/0:13,0:13:39.13:0,39,623	0/0:29,0:29:84.28:0,84,1321	0/0:9,0:9:27.09:0,27,429	0/0:18,0:18:54.18:0,54,850	0/0:36,0:36:99:0,108,1679	0/0:16,0:16:48.16:0,48,767	0/0:17,0:17:51.17:0,51,807	0/0:17,0:17:51.17:0,51,815	0/0:17,0:17:51.17:0,51,811	0/0:10,0:10:30.10:0,30,479	0/0:10,0:10:30.08:0,30,454	0/0:13,0:13:39.10:0,39,592	0/0:15,0:15:45.13:0,45,674	0/0:22,0:22:66.22:0,66,1046	0/0:14,0:14:42.13:0,42,648	0/0:19,0:19:57.19:0,57,907	0/0:26,0:26:78.24:0,78,1194	0/0:11,0:11:33.10:0,33,503	0/0:23,0:23:69.24:0,69,1099	0/0:22,0:22:66.23:0,66,1055	0/0:19,0:19:57.19:0,57,910	0/0:22,0:22:66.23:0,66,1051
chr10	24467166	.	G	GA	3565.90	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-6.730;DP=548;FS=0.826;HRun=8;HaplotypeScore=60.4294;InbreedingCoeff=0.9836;MQ=85.36;MQ0=0;MQRankSum=-1.192;QD=30.48;ReadPosRankSum=-0.351;VQSLOD=3.2508;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,18:19:54.16:623,54,0	0/0:7,0:7:21.01:0,21,192	0/0:19,0:19:23.97:0,24,305	0/0:15,0:16:17.93:0,18,152	0/0:32,0:32:90.04:0,90,824	0/0:31,1:32:43.41:0,43,647	0/0:22,0:22:63.03:0,63,577	0/0:29,0:29:75.03:0,75,683	1/1:1,13:14:36.11:415,36,0	0/0:31,0:31:75.02:0,75,687	0/0:18,0:18:42.02:0,42,384	0/0:11,0:11:33.02:0,33,302	0/0:12,0:12:33.02:0,33,302	0/0:26,0:26:78.04:0,78,714	0/0:26,0:26:75.03:0,75,682	0/0:27,0:27:69.01:0,69,627	1/1:2,13:15:39.12:450,39,0	1/1:1,13:14:36.11:415,36,0	1/1:2,22:24:66.20:761,66,0	1/1:3,9:13:29.89:312,30,0	1/1:1,17:18:51.15:589,51,0	0/0:14,0:14:42.02:0,42,384	0/0:22,0:22:60.01:0,60,544	0/0:15,1:16:10.41:0,10,350	0/0:20,0:20:48:0,48,435	0/0:19,0:19:45.02:0,45,412	0/0:26,0:26:75.04:0,75,686	0/0:6,0:6:12.01:0,12,110
chr10	24467720	.	T	TA	732.61	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-0.176;DP=475;FS=1.570;HRun=8;HaplotypeScore=75.8933;InbreedingCoeff=0.9403;MQ=77.55;MQ0=0;MQRankSum=-2.019;QD=21.55;ReadPosRankSum=1.423;VQSLOD=4.1669;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,28:34:74.97:827,75,0	0/0:14,0:14:38.99:0,39,348	0/0:15,0:15:32.99:0,33,306	0/0:16,0:16:15:0,15,284	0/0:20,0:20:48.02:0,48,439	0/0:13,0:13:30.02:0,30,275	0/0:13,0:13:30.01:0,30,274	0/0:20,0:20:44.99:0,45,399	0/0:12,0:12:36.01:0,36,325	0/0:22,0:22:60.03:0,60,547	0/0:19,0:19:50.98:0,51,455	0/0:13,0:13:33.01:0,33,302	0/0:22,0:22:53.99:0,54,487	0/0:15,0:15:36.01:0,36,329	0/0:14,0:14:36:0,36,326	0/0:16,0:16:47.90:0,48,417	0/0:17,0:17:44.93:0,45,391	0/0:11,0:11:30.02:0,30,274	0/0:20,0:20:51:0,51,463	0/0:20,0:20:60.02:0,60,543	0/0:15,0:15:42.02:0,42,384	0/0:14,0:14:36.01:0,36,327	0/0:17,0:17:47.38:0,47,414	0/0:10,0:10:30:0,30,269	0/0:17,0:17:45.02:0,45,411	0/0:16,1:17:10.44:0,10,347	0/0:26,0:26:74.96:0,75,667	0/0:13,0:13:26.99:0,27,247
chr10	24467817	.	AACAC	A	1927.11	PASS	AB=0.848;AC=38;AF=0.792;AN=48;BaseQRankSum=1.015;DP=453;FS=0.000;HRun=0;HaplotypeScore=96.0567;InbreedingCoeff=-0.1900;MQ=57.11;MQ0=15;MQRankSum=-0.899;QD=5.19;ReadPosRankSum=-0.249;VQSLOD=1.8935;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:22:11.75:93,12,0	1/1:8,0:8:8.38:80,8,0	./.	./.	0/1:27,0:27:10.29:29,0,10	0/1:10,1:14:34.70:35,0,70	0/1:20,1:21:32.27:75,0,32	0/0:17,0:17:0:0,0,0	1/1:7,0:19:17.98:167,18,0	0/1:12,0:17:16.72:30,0,17	1/1:8,0:8:2.80:13,3,0	./.	0/1:15,0:16:2.54:80,0,3	0/1:10,5:16:34.84:35,0,45	1/1:5,6:11:6.02:92,6,0	1/1:9,8:18:15.04:203,15,0	1/1:8,0:11:6.01:56,6,0	1/1:8,0:15:9.01:84,9,0	1/1:10,0:8:2.96:19,3,0	1/1:13,0:19:9.01:84,9,0	./.	1/1:15,8:22:14.96:202,15,0	1/1:14,5:21:14.99:168,15,0	1/1:13,6:18:15.04:213,15,0	0/1:8,3:11:15.88:83,0,16	1/1:9,2:12:6:74,6,0	1/1:12,5:17:7.82:101,8,0	0/1:7,1:8:37.12:37,0,54
chr10	24468419	.	CAT	C	5482.06	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=12.896;DP=630;FS=10.986;HRun=0;HaplotypeScore=74.3354;InbreedingCoeff=0.9870;MQ=84.46;MQ0=1;MQRankSum=0.874;QD=41.53;ReadPosRankSum=2.669;VQSLOD=6.4576;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:93.32:0,93,1795	0/0:13,0:13:36.11:0,36,659	0/0:24,0:24:69.22:0,69,1201	0/0:20,0:21:42.78:0,43,996	0/0:27,0:27:75.26:0,75,1436	0/0:29,0:29:87.28:0,87,1646	0/0:13,0:13:36.12:0,36,687	0/0:39,0:39:99:0,117,2130	1/1:1,22:23:60.20:919,60,0	0/0:34,0:34:99:0,99,1878	0/0:16,0:16:48.16:0,48,926	0/0:25,0:25:72.23:0,72,1357	0/0:17,0:17:51.13:0,51,884	0/0:22,0:22:66.20:0,66,1199	0/0:29,0:29:84.29:0,84,1622	0/0:21,1:22:20.28:0,20,1170	1/1:0,21:21:51.17:781,51,0	1/1:1,8:9:27.05:387,27,0	1/1:0,24:23:69.23:1053,69,0	1/1:1,28:29:84.29:1286,84,0	1/1:0,26:26:69.23:1057,69,0	0/0:10,0:10:30.10:0,30,571	0/0:25,0:25:72.25:0,72,1371	0/0:17,0:17:51.16:0,51,951	0/0:22,0:22:63.20:0,63,1175	0/0:23,0:23:69.20:0,69,1236	0/0:36,0:36:99:0,105,2018	0/0:3,0:3:9.03:0,9,157
chr10	24468670	.	C	CT	1076.05	PASS	AB=0.876;AC=30;AF=0.600;AN=50;BaseQRankSum=-3.301;DP=279;FS=19.105;HRun=13;HaplotypeScore=51.5808;InbreedingCoeff=0.2217;MQ=66.02;MQ0=14;MQRankSum=-1.149;QD=5.69;ReadPosRankSum=1.757;VQSLOD=0.6101;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:4:2.90:0,3,16	1/1:4,6:9:12.90:113,13,0	0/0:23,0:4:11.65:0,12,72	0/0:30,0:9:18.51:0,19,98	1/1:9,3:12:8.96:75,9,0	0/1:12,0:11:8.58:64,0,9	0/1:3,3:6:11.57:47,0,12	0/0:18,0:18:13.65:0,14,54	0/1:4,0:4:0:0,0,0	0/1:11,7:18:2.73:99,0,3	1/1:3,4:7:8.88:70,9,0	0/1:6,1:7:11.50:42,0,11	0/1:8,0:8:17.25:35,0,17	0/1:8,1:9:2.61:113,0,3	1/1:2,4:6:8.92:66,9,0	1/1:4,2:6:11.59:89,12,0	0/0:6,0:5:2.79:0,3,13	./.	0/1:16,0:13:7.88:8,0,31	0/1:15,0:15:0:0,0,0	1/1:7,0:7:2.96:19,3,0	./.	1/1:2,4:6:9.01:84,9,0	./.	0/1:2,5:8:0.86:23,0,1	1/1:6,6:11:6.01:56,6,0	1/1:8,0:7:5.95:42,6,0	1/1:1,9:11:20.86:181,21,0
chr10	24468684	.	CT	C	172.26	PASS	AC=2;AF=0.042;AN=48;BaseQRankSum=-3.621;DP=253;FS=0.000;HRun=13;HaplotypeScore=38.8169;InbreedingCoeff=0.3893;MQ=64.88;MQ0=48;MQRankSum=-2.788;QD=7.49;ReadPosRankSum=-3.282;VQSLOD=0.6118;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:3,0:1:2.92:0,3,17	0/0:9,0:8:15.04:0,15,158	0/0:32,0:4:3:0,3,26	0/0:32,0:9:5.33:0,5,22	0/0:10,0:8:18.04:0,18,183	0/0:9,0:8:4.48:0,4,105	0/0:6,0:6:12.03:0,12,126	1/1:10,13:19:24.57:263,25,0	./.	0/0:14,0:14:21.05:0,21,217	0/0:8,0:8:6.01:0,6,61	0/0:5,0:5:8.76:0,9,75	0/0:6,0:6:14.25:0,14,101	0/0:7,1:8:12.02:0,12,117	0/0:5,0:4:9.02:0,9,93	0/0:4,0:4:11.93:0,12,111	0/0:7,0:3:2.68:0,3,11	./.	0/0:9,0:4:8.36:0,8,54	./.	0/0:6,0:4:5.69:0,6,43	0/0:1,0:1:0:0,0,0	0/0:8,0:7:14.90:0,15,155	./.	0/0:7,0:7:6.01:0,6,60	0/0:13,0:10:27.07:0,27,283	0/0:7,0:4:11.98:0,12,107	0/0:17,0:12:21.05:0,21,222
chr10	24468689	.	T	TC	79.88	PASS	AB=0.784;AC=4;AF=0.083;AN=48;BaseQRankSum=1.852;DP=247;FS=4.948;HRun=0;HaplotypeScore=36.8364;InbreedingCoeff=0.1682;MQ=56.27;MQ0=56;MQRankSum=1.193;QD=3.63;ReadPosRankSum=1.039;VQSLOD=1.8231;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:1:3.01:0,3,41	0/0:9,0:8:18.03:0,18,225	0/0:31,0:4:5.13:0,5,65	0/0:27,0:5:1.89:0,2,30	0/0:9,1:8:21.01:0,21,237	0/0:9,0:8:17.95:0,18,178	0/0:5,0:5:12.04:0,12,159	0/0:21,1:18:9.71:0,10,299	./.	0/0:14,0:13:24.05:0,24,298	0/0:9,0:7:11.93:0,12,101	0/0:5,0:5:9.03:0,9,113	0/1:4,2:6:65.66:66,0,99	0/0:6,0:6:15.02:0,15,165	0/0:5,0:4:9.03:0,9,116	0/0:5,0:4:11.90:0,12,130	1/1:4,3:3:3.01:40,3,0	./.	0/1:7,2:4:32.40:72,0,32	./.	0/0:5,2:4:4.26:0,4,44	0/0:1,0:1:0.89:0,1,2	0/0:7,0:6:14.82:0,15,190	./.	0/0:6,0:6:6.02:0,6,83	0/0:12,0:9:27.09:0,27,370	0/0:7,0:4:11.95:0,12,105	0/0:20,0:13:22.88:0,23,263
chr10	24472922	.	TATAC	T	12806.76	PASS	AB=0.692;AC=51;AF=0.911;AN=56;BaseQRankSum=-1.346;DP=639;FS=0.000;HRun=0;HaplotypeScore=139.6594;InbreedingCoeff=0.4675;MQ=59.16;MQ0=6;MQRankSum=2.950;QD=21.10;ReadPosRankSum=2.410;VQSLOD=4.6242;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:10,0:18:8.97:97,0,9	1/1:3,9:12:21.07:339,21,0	0/0:12,0:6:3.59:0,4,10	0/0:20,0:4:0.89:0,1,2	1/1:6,18:24:33.11:533,33,0	1/1:9,16:25:39.13:630,39,0	1/1:4,7:11:18.06:291,18,0	1/1:19,14:33:42.10:594,42,0	1/1:13,0:28:24.03:224,24,0	1/1:8,15:23:48.15:735,48,0	1/1:7,16:23:42.06:647,42,0	1/1:3,22:25:48.16:775,48,0	1/1:9,21:31:42.14:658,42,0	1/1:10,15:26:45.15:695,45,0	1/1:11,23:34:45.15:727,45,0	1/1:5,19:25:42.14:658,42,0	1/1:8,0:14:9.01:84,9,0	1/1:8,0:8:1.55:4,2,0	1/1:11,0:23:27.03:252,27,0	1/1:17,0:41:30.03:280,30,0	1/1:5,0:12:3:28,3,0	1/1:10,18:28:41.97:604,42,0	1/1:9,21:30:51.17:824,51,0	1/1:6,9:16:18.05:270,18,0	1/1:9,17:26:39.13:630,39,0	1/1:6,28:34:84.20:1278,84,0	1/1:13,17:31:48.16:755,48,0	1/1:2,4:6:12.04:194,12,0
chr10	24475528	.	AAT	A	281.81	PASS	AC=4;AF=0.222;AN=18;BaseQRankSum=-2.903;DP=127;FS=8.852;HRun=0;HaplotypeScore=18.6853;MQ=88.97;MQ0=1;MQRankSum=-0.073;QD=9.09;ReadPosRankSum=-2.806;VQSLOD=0.9291;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:6,0:5:2.22:0,2,7	./.	./.	./.	./.	1/1:15,9:26:32.58:332,33,0	0/0:3,0:4:3:0,3,26	./.	0/0:8,0:8:3:0,3,26	./.	./.	./.	./.	./.	1/1:4,1:5:3.01:35,3,0	0/0:2,0:13:26.99:0,27,237	0/0:2,0:2:1.55:0,2,4	0/0:2,0:3:3:0,3,26	./.	./.	./.	./.	./.	./.	./.	0/0:2,0:6:1.25:0,1,3
chr10	24475949	.	AT	A	13476.08	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=12.265;DP=619;FS=9.819;HRun=5;HaplotypeScore=60.6375;InbreedingCoeff=0.9994;MQ=75.23;MQ0=0;MQRankSum=-0.598;QD=31.41;ReadPosRankSum=4.235;VQSLOD=5.0744;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:42.13:0,42,556	1/1:0,10:10:30.09:340,30,0	0/0:10,0:10:26.44:0,26,312	0/0:12,0:12:33.04:0,33,392	1/1:2,36:38:99:1225,108,0	1/1:2,34:36:99:1157,102,0	1/1:1,11:12:27.08:306,27,0	0/0:35,0:35:96.32:0,96,1313	0/0:18,0:18:54.18:0,54,738	1/1:1,21:22:60.17:680,60,0	1/1:3,31:34:90.25:1021,90,0	1/1:0,17:17:45.13:511,45,0	1/1:1,26:27:69.20:783,69,0	1/1:0,9:9:27.08:306,27,0	1/1:0,30:30:87.25:987,87,0	1/1:0,22:22:63.18:715,63,0	0/0:16,0:16:48.10:0,48,611	0/0:18,0:18:48.16:0,48,655	0/0:24,0:24:63.21:0,63,862	0/0:23,0:23:66.22:0,66,900	0/0:20,0:20:57.19:0,57,778	1/1:0,21:21:63.18:714,63,0	1/1:0,27:27:78.22:885,78,0	1/1:0,14:14:39.11:442,39,0	1/1:1,27:28:72.20:817,72,0	1/1:2,27:29:81.23:919,81,0	1/1:0,28:28:75.21:851,75,0	1/1:1,24:25:72.21:817,72,0
chr10	24478251	.	T	TA	448.57	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-4.674;DP=522;FS=0.000;HRun=7;HaplotypeScore=48.9402;InbreedingCoeff=0.9600;MQ=76.35;MQ0=0;MQRankSum=-0.543;QD=29.90;ReadPosRankSum=0.552;VQSLOD=3.9046;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,15:15:45.14:543,45,0	0/0:8,0:8:23.99:0,24,222	0/0:9,0:9:23.98:0,24,215	0/0:12,0:12:14.11:0,14,144	0/0:33,1:34:56.85:0,57,818	0/0:23,0:23:66.10:0,66,637	0/0:15,0:15:39.05:0,39,371	0/0:29,0:29:78.11:0,78,746	0/0:14,0:14:42.06:0,42,400	0/0:26,0:26:69.04:0,69,652	0/0:33,0:33:96.15:0,96,926	0/0:16,0:16:48.08:0,48,463	0/0:26,0:26:66.05:0,66,624	0/0:26,0:26:75.12:0,75,724	0/0:20,0:20:57.07:0,57,543	0/0:18,0:18:48.07:0,48,460	0/0:12,0:12:26.98:0,27,245	0/0:14,0:14:36.06:0,36,347	0/0:14,0:14:30.03:0,30,285	0/0:28,0:28:78.07:0,78,743	0/0:7,0:7:18.03:0,18,174	0/0:18,0:18:51.08:0,51,492	0/0:20,0:20:53.97:0,54,497	0/0:14,0:14:36.01:0,36,338	0/0:24,0:24:69.08:0,69,655	0/0:15,0:15:42.07:0,42,406	0/0:25,0:25:72.05:0,72,670	0/0:7,0:7:18.03:0,18,174
chr10	24479235	.	C	CTA	15389.50	PASS	AB=0.974;AC=54;AF=0.964;AN=56;BaseQRankSum=-5.795;DP=496;FS=4.575;HRun=0;HaplotypeScore=70.7665;InbreedingCoeff=0.0238;MQ=92.30;MQ0=5;MQRankSum=-3.095;QD=31.03;ReadPosRankSum=3.166;VQSLOD=6.6828;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,12:23:48.16:813,48,0	1/1:3,2:5:9.03:156,9,0	0/1:28,0:16:9.71:10,0,92	0/1:68,1:44:77.46:192,0,77	1/1:3,18:21:51.17:883,51,0	1/1:4,9:13:36.11:595,36,0	1/1:4,12:16:24.08:416,24,0	1/1:5,36:44:99:1854,117,0	1/1:2,9:11:33.11:566,33,0	1/1:4,15:19:54.18:928,54,0	1/1:3,13:16:24.08:415,24,0	1/1:7,6:13:27.01:402,27,0	1/1:4,11:15:33.11:571,33,0	1/1:0,9:9:24.08:398,24,0	1/1:3,9:12:30.09:492,30,0	1/1:2,12:14:33.11:572,33,0	1/1:3,11:14:33.11:571,33,0	1/1:3,8:12:30.08:484,30,0	1/1:3,19:22:58.44:967,58,0	1/1:2,9:11:24.08:396,24,0	1/1:2,10:11:21.07:364,21,0	1/1:3,2:5:9.03:156,9,0	1/1:1,7:8:15.05:260,15,0	1/1:4,1:4:3.01:52,3,0	1/1:6,11:17:24.06:383,24,0	1/1:6,20:26:72.25:1233,72,0	1/1:6,13:19:42.14:712,42,0	1/1:2,9:11:33.11:548,33,0
chr10	24479238	.	T	TAG	7491.44	PASS	AB=0.969;AC=48;AF=0.857;AN=56;BaseQRankSum=-1.331;DP=511;FS=3.773;HRun=0;HaplotypeScore=103.3984;InbreedingCoeff=-0.2014;MQ=95.22;MQ0=5;MQRankSum=-1.407;QD=14.66;ReadPosRankSum=9.476;VQSLOD=3.5487;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:22:29.04:421,29,0	1/1:5,0:5:9:81,9,0	0/1:28,1:17:25.66:26,0,124	0/1:66,6:49:95.15:353,0,95	1/1:22,0:22:7.15:423,7,0	1/1:15,0:15:12.03:274,12,0	1/1:14,0:14:2.06:191,2,0	1/1:45,0:44:60.68:799,61,0	1/1:11,0:11:33.01:301,33,0	1/1:20,0:20:29.96:423,30,0	1/1:15,0:15:2.06:191,2,0	0/1:12,0:12:0.53:161,0,1	1/1:13,0:13:11.07:280,11,0	0/1:11,0:11:19.96:180,0,20	0/1:13,0:13:16.92:212,0,17	1/1:14,0:14:11.06:269,11,0	0/1:15,0:15:6.90:263,0,7	1/1:12,0:12:26.47:252,26,0	1/1:22,0:22:14.50:414,14,0	1/1:12,0:12:2:178,2,0	1/1:10,0:9:21.01:189,21,0	0/1:7,0:7:57.85:63,0,58	1/1:7,0:7:15.01:137,15,0	0/1:5,0:4:17.96:18,0,41	1/1:18,0:18:20.42:185,20,0	1/1:28,0:28:0.15:547,0,0	1/1:20,0:20:21.05:360,21,0	1/1:11,0:11:32.98:304,33,0
chr10	24479322	.	T	TC	15625.36	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-5.472;DP=523;FS=7.993;HRun=4;HaplotypeScore=62.1506;InbreedingCoeff=0.9901;MQ=60.29;MQ0=4;MQRankSum=1.333;QD=32.08;ReadPosRankSum=5.137;VQSLOD=5.0965;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,31:32:66.22:901,66,0	1/1:1,8:9:21.07:287,21,0	0/0:19,0:13:32.95:0,33,343	0/0:16,0:12:31.08:0,31,281	1/1:1,20:21:57.19:769,57,0	1/1:2,20:22:42.14:574,42,0	1/1:1,14:15:27.09:369,27,0	1/1:7,28:32:81.23:1050,81,0	1/1:2,8:10:24.08:328,24,0	1/1:4,26:30:81:1031,81,0	1/1:1,17:17:45.15:611,45,0	1/1:0,16:16:36.12:492,36,0	1/1:0,17:17:42.14:574,42,0	1/1:1,13:14:36.12:484,36,0	1/1:0,19:19:48.16:656,48,0	1/1:1,18:19:42.09:574,42,0	1/1:2,24:26:57.19:779,57,0	1/1:1,22:23:60.13:796,60,0	1/1:1,10:10:30.10:408,30,0	1/1:1,20:21:59.93:785,60,0	1/1:1,7:8:18.06:246,18,0	1/1:3,16:19:45.14:590,45,0	1/1:0,10:10:30.10:409,30,0	1/1:1,14:15:38.73:485,39,0	1/1:0,23:23:48.16:656,48,0	1/1:1,23:25:69.16:877,69,0	1/1:0,19:19:42.14:573,42,0	1/1:0,9:9:24.08:323,24,0
chr10	24482687	.	AAC	A	432.43	PASS	AB=0.945;AC=10;AF=0.179;AN=56;BaseQRankSum=-4.059;DP=506;FS=1.118;HRun=0;HaplotypeScore=107.6322;InbreedingCoeff=-0.0664;MQ=67.49;MQ0=8;MQRankSum=1.395;QD=2.49;ReadPosRankSum=-8.781;VQSLOD=0.1290;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:28:3.35:90,3,0	0/0:7,0:6:11.21:0,11,98	0/0:11,0:9:21.04:0,21,313	0/0:14,0:11:4.49:0,4,175	0/1:34,1:33:99:100,0,612	0/0:16,0:16:22.11:0,22,327	0/0:17,1:17:38.89:0,39,344	0/0:24,0:24:14.52:0,15,441	0/0:14,0:14:25.24:0,25,261	0/1:17,1:17:33.47:33,0,259	0/0:17,0:17:1.74:0,2,299	0/0:15,0:15:38.91:0,39,317	0/0:13,1:13:24.56:0,25,219	0/1:11,2:13:99:99,0,160	0/0:18,0:18:50.90:0,51,415	0/0:15,0:15:38.97:0,39,345	0/0:25,0:24:43.09:0,43,436	0/0:25,0:25:11.97:0,12,384	0/1:10,2:10:53.93:153,0,54	0/0:39,0:38:47.96:0,48,716	0/1:7,0:7:3.81:4,0,129	0/1:22,1:20:29.99:30,0,358	0/1:20,1:21:16.94:17,0,341	0/0:11,0:10:19.36:0,19,162	0/0:13,0:13:29.97:0,30,253	0/1:17,0:17:43.32:43,0,291	0/0:23,0:23:29.72:0,30,317	0/0:13,0:13:7.04:0,7,79
chr10	24482689	.	C	CAA	14992.68	PASS	AB=1.000;AC=53;AF=0.946;AN=56;BaseQRankSum=-3.654;DP=540;FS=1.147;HRun=8;HaplotypeScore=67.4173;InbreedingCoeff=0.6278;MQ=67.53;MQ0=8;MQRankSum=-3.686;QD=28.34;ReadPosRankSum=2.690;VQSLOD=4.7735;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:28:38.79:531,39,0	1/1:1,7:7:9.03:143,9,0	0/0:11,0:9:20.95:0,21,216	0/1:14,0:11:11.33:11,0,111	1/1:10,28:37:87.04:1179,87,0	1/1:2,14:17:39.13:619,39,0	1/1:6,10:17:29:368,29,0	1/1:6,0:25:45.04:158,45,0	1/1:2,12:15:32.60:485,33,0	1/1:3,14:16:45.09:681,45,0	1/1:2,16:18:45.06:653,45,0	1/1:1,15:16:39.13:600,39,0	1/1:2,13:15:30.10:476,30,0	1/1:4,10:14:40.68:590,41,0	1/1:3,15:18:42.14:667,42,0	1/1:1,11:15:32.59:466,33,0	1/1:6,19:28:51.85:712,52,0	1/1:5,19:26:55.11:761,55,0	1/1:6,9:13:27.06:383,27,0	1/1:5,38:42:99:1530,105,0	1/1:0,7:7:21.07:333,21,0	1/1:3,19:21:51.13:773,51,0	1/1:3,20:24:48.09:708,48,0	1/1:3,8:10:12.93:193,13,0	1/1:0,14:15:30.10:457,30,0	1/1:1,16:18:50.60:689,51,0	1/1:1,21:26:41.11:589,41,0	1/1:1,12:13:14.94:238,15,0
chr10	24483204	.	CA	C	14387.81	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=0.571;DP=574;FS=6.872;HRun=7;HaplotypeScore=60.5649;InbreedingCoeff=0.9446;MQ=76.68;MQ0=0;MQRankSum=-7.435;QD=26.50;ReadPosRankSum=5.572;VQSLOD=5.1598;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,20:21:50.15:495,50,0	1/1:0,11:11:30.07:306,30,0	0/0:18,0:18:48.15:0,48,589	0/0:13,0:13:21.31:0,21,243	1/1:5,19:24:48.09:490,48,0	1/1:1,25:26:75.17:765,75,0	1/1:0,8:8:24.05:245,24,0	1/1:2,23:25:69.13:691,69,0	1/1:1,32:33:78.18:796,78,0	1/1:2,33:35:96.21:980,96,0	1/1:2,23:25:66.15:673,66,0	1/1:0,24:24:72.16:735,72,0	1/1:2,19:21:57.13:582,57,0	1/1:1,20:21:57.13:582,57,0	1/1:3,24:27:66.15:673,66,0	1/1:2,21:23:60.14:612,60,0	1/1:0,20:20:54.12:551,54,0	1/1:2,15:17:45.10:459,45,0	1/1:1,22:23:66.08:653,66,0	1/1:1,19:20:51.11:520,51,0	1/1:1,3:4:6.01:61,6,0	1/1:0,22:22:57.12:582,57,0	1/1:2,15:17:39.02:398,39,0	1/1:2,11:13:33.07:337,33,0	1/1:0,14:14:36.08:367,36,0	1/1:3,22:25:66.14:673,66,0	1/1:5,30:35:87.19:888,87,0	1/1:0,9:9:27.06:275,27,0
chr10	24483542	.	A	ACACACACA	2321.76	PASS	AB=1.000;AC=33;AF=0.717;AN=46;BaseQRankSum=-4.210;DP=513;FS=3.389;HRun=0;HaplotypeScore=142.8820;InbreedingCoeff=0.2674;MQ=52.03;MQ0=14;MQRankSum=1.369;QD=7.10;ReadPosRankSum=-0.051;VQSLOD=2.6208;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:40:6.02:0,6,111	1/1:8,0:8:3.01:83,3,0	./.	./.	0/0:13,6:20:0.94:0,1,2	1/1:22,0:22:6.02:131,6,0	1/1:14,0:14:3.48:122,3,0	0/1:21,0:20:0:0,0,0	./.	1/1:18,0:18:17.17:222,17,0	1/1:16,0:15:3.01:121,3,0	0/0:18,0:18:2.91:0,3,74	1/1:12,0:12:2.99:23,3,0	1/1:11,0:10:3.01:121,3,0	1/1:16,0:16:3.01:64,3,0	1/1:19,0:19:6.02:186,6,0	0/1:29,0:29:19.85:270,0,20	0/0:10,0:10:1.82:0,2,5	1/1:9,0:8:8.99:96,9,0	1/1:22,0:22:20.86:265,21,0	1/1:30,0:30:5.21:89,5,0	0/0:19,0:17:2.18:0,2,15	1/1:17,0:17:5.23:145,5,0	0/1:24,0:24:6.95:138,0,7	./.	1/1:25,0:24:8.24:180,8,0	1/1:14,0:14:6.02:187,6,0	./.
chr10	24483565	.	CACACACACACACAG	C	724.17	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=0.368;DP=551;FS=0.000;HRun=0;HaplotypeScore=185.8521;InbreedingCoeff=0.0444;MQ=52.72;MQ0=18;MQRankSum=1.949;QD=4.19;ReadPosRankSum=-3.045;VQSLOD=2.1183;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,34:40:6.91:260,7,0	0/0:5,0:5:6.02:0,6,246	0/0:24,0:9:27.02:0,27,271	0/0:32,0:17:41.27:0,41,461	0/0:29,0:29:44.44:0,44,706	0/0:23,0:23:44.97:0,45,990	0/0:16,0:16:30.49:0,30,705	0/1:19,0:18:9.76:286,0,10	0/1:7,0:6:21.89:22,0,335	0/0:23,0:22:61.01:0,61,1924	0/0:17,0:15:21:0,21,382	0/0:18,0:18:27.02:0,27,746	0/0:15,0:15:26.97:0,27,709	0/0:12,0:12:30.01:0,30,724	0/0:15,0:15:21.06:0,21,773	0/0:18,0:18:15.04:0,15,544	0/1:28,0:28:55.08:55,0,2031	0/1:11,0:11:56.25:56,0,352	0/1:10,0:9:60.68:61,0,662	0/1:24,0:24:62.55:63,0,1683	0/1:31,0:31:63.38:63,0,986	0/0:20,0:18:18.33:0,18,590	0/0:19,0:19:29.57:0,30,879	0/0:25,0:25:44.53:0,45,1228	0/0:18,0:18:21.01:0,21,218	0/0:22,0:22:66.20:0,66,2618	0/0:14,0:14:33.04:0,33,904	0/0:13,0:10:30.05:0,30,919
chr10	24483577	.	CAG	C	1378.28	PASS	AB=1.000;AC=14;AF=0.250;AN=56;BaseQRankSum=1.126;DP=574;FS=1.033;HRun=0;HaplotypeScore=104.7966;InbreedingCoeff=0.7519;MQ=68.66;MQ0=16;MQRankSum=0.485;QD=7.83;ReadPosRankSum=2.165;VQSLOD=3.4350;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:37,0:36:5.67:51,6,0	0/0:6,0:6:7.24:0,7,53	0/0:33,0:18:53.95:0,54,505	0/0:37,0:24:62.07:0,62,598	0/0:26,0:26:47.32:0,47,391	0/0:27,0:27:55.35:0,55,465	0/0:16,0:16:32.96:0,33,324	1/1:6,15:21:49.92:412,50,0	1/1:6,0:5:14.85:111,15,0	0/0:25,0:24:59.78:0,60,544	0/0:16,0:14:29.90:0,30,250	0/0:16,0:16:21:0,21,227	0/0:16,0:16:26.88:0,27,212	0/0:14,0:14:35.97:0,36,332	0/0:16,0:16:26.98:0,27,238	0/0:19,0:19:20.99:0,21,198	0/1:28,0:28:4.20:241,0,4	1/1:11,0:11:11.15:78,11,0	1/1:14,0:13:11.31:189,11,0	0/1:27,0:27:6.06:285,0,6	1/1:32,0:32:0.78:185,1,0	0/0:19,0:17:14.95:0,15,162	0/0:18,0:18:33.08:0,33,297	0/0:21,0:21:36.33:0,36,347	0/0:18,0:18:23.98:0,24,201	0/0:29,0:28:49.41:0,49,453	0/0:15,0:15:35.92:0,36,308	0/0:11,0:8:23.94:0,24,192
chr10	24485404	.	G	GA	961.98	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-8.978;DP=563;FS=2.457;HRun=6;HaplotypeScore=52.7072;InbreedingCoeff=0.9119;MQ=64.99;MQ0=0;MQRankSum=-0.813;QD=27.49;ReadPosRankSum=-3.817;VQSLOD=2.4563;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:39.09:0,39,398	0/0:6,0:6:15.03:0,15,153	0/0:11,0:10:17.99:0,18,171	0/0:5,0:5:8.69:0,9,72	0/0:37,0:37:99:0,102,1041	0/0:18,0:18:48.07:0,48,475	0/0:19,0:19:51.10:0,51,514	1/1:6,29:35:87.24:1057,87,0	0/0:14,0:14:42.10:0,42,429	0/0:30,0:30:81.18:0,81,822	0/0:32,0:32:93.21:0,93,949	0/0:14,0:14:39.05:0,39,383	0/0:26,0:26:72.12:0,72,720	0/0:18,0:18:51.12:0,51,520	0/0:22,0:22:66.13:0,66,666	0/0:17,0:17:45.10:0,45,459	0/0:21,0:21:54.10:0,54,542	0/0:21,0:21:54.12:0,54,551	0/0:24,0:24:63.13:0,63,637	0/0:31,0:31:84.14:0,84,836	0/0:13,0:13:39.09:0,39,398	0/0:21,0:21:48.10:0,48,487	0/0:21,0:21:63.14:0,63,643	0/0:8,0:8:18.04:0,18,184	0/0:28,0:28:72.14:0,72,726	0/0:25,0:25:75.17:0,75,765	0/0:22,0:22:63.12:0,63,635	0/0:9,0:9:24.05:0,24,245
chr10	24485593	.	A	AG	1217.04	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=-7.723;DP=502;FS=0.000;HRun=2;HaplotypeScore=55.4243;InbreedingCoeff=0.7577;MQ=72.45;MQ0=0;MQRankSum=2.870;QD=27.66;ReadPosRankSum=-4.974;VQSLOD=1.8017;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:44.99:0,45,520	0/0:7,0:7:21.03:0,21,224	0/0:9,0:9:16.04:0,16,210	0/1:10,0:8:0.09:0,0,78	0/0:30,0:30:90.25:0,90,1076	0/0:20,0:20:60.16:0,60,719	0/0:6,0:6:18.05:0,18,211	1/1:2,32:34:95.96:1312,96,0	0/0:5,0:5:14.87:0,15,105	0/0:21,0:21:63.20:0,63,781	0/0:30,0:30:84.25:0,84,1019	0/0:12,0:12:36.11:0,36,446	0/0:21,0:21:57.14:0,57,668	0/0:19,0:19:57.15:0,57,678	0/0:20,0:20:57.16:0,57,686	0/0:19,0:19:51.14:0,51,607	0/0:21,0:21:59.36:0,59,403	0/0:14,0:14:38.56:0,39,256	0/0:11,0:11:23.77:0,24,164	0/0:31,0:31:88.76:0,89,591	0/0:10,0:10:23.77:0,24,165	0/0:14,0:14:42.11:0,42,498	0/0:20,0:20:60.14:0,60,687	0/0:8,0:8:21.07:0,21,260	0/0:22,0:22:60.16:0,60,708	0/0:29,0:29:81.22:0,81,964	0/0:27,0:27:81.22:0,81,967	0/0:17,0:17:45.12:0,45,543
chr10	24485595	.	GA	G	1938.24	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=9.146;DP=502;FS=2.783;HRun=8;HaplotypeScore=52.8790;InbreedingCoeff=0.8832;MQ=74.24;MQ0=0;MQRankSum=-1.084;QD=19.19;ReadPosRankSum=2.210;VQSLOD=3.6314;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:39.12:0,39,471	0/0:7,0:7:12.04:0,12,145	0/0:9,0:10:18.03:0,18,209	0/1:12,0:10:21.97:22,0,51	0/0:30,0:30:81.25:0,81,977	0/0:20,0:20:54.17:0,54,652	0/0:7,0:7:18.04:0,18,206	0/0:35,0:35:97.30:0,97,615	1/1:1,4:5:12.02:116,12,0	0/0:22,0:22:66.20:0,66,789	0/0:31,0:31:87.24:0,87,1030	0/0:12,0:12:36.11:0,36,435	0/0:19,0:19:54.12:0,54,636	0/0:19,0:19:57.16:0,57,677	0/0:20,0:20:54.16:0,54,644	0/0:18,0:18:45.14:0,45,544	1/1:2,19:21:54.09:521,54,0	1/1:1,13:14:36.06:348,36,0	1/1:1,7:8:21.03:203,21,0	1/1:2,29:31:75.06:714,75,0	1/1:1,9:10:21.03:203,21,0	0/0:14,0:14:39.11:0,39,461	0/0:20,0:20:48.14:0,48,570	0/0:7,0:7:21.06:0,21,253	0/0:22,0:22:60.17:0,60,714	0/0:27,0:27:72.22:0,72,869	0/0:29,0:29:78.21:0,78,912	0/0:17,0:17:42.10:0,42,493
chr10	24487646	.	GTGTGTGGAGA	G	1292.62	PASS	AB=0.980;AC=20;AF=0.385;AN=52;BaseQRankSum=1.123;DP=355;FS=11.891;HRun=0;HaplotypeScore=106.6049;InbreedingCoeff=-0.3433;MQ=38.33;MQ0=54;MQRankSum=-5.426;QD=5.69;ReadPosRankSum=-1.453;VQSLOD=1.2920;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:18:99:212,0,252	0/1:5,0:5:10.50:56,0,10	./.	./.	0/1:9,2:9:14.92:15,0,108	0/1:18,0:16:14.82:15,0,82	0/1:16,0:11:28.97:143,0,29	1/1:17,0:13:7.08:261,7,0	0/0:13,0:10:11.94:0,12,247	0/1:16,0:7:65.70:98,0,66	0/0:9,0:8:1.96:0,2,37	0/0:10,0:8:8.88:0,9,91	1/1:6,0:5:6.02:108,6,0	0/1:17,1:17:99:141,0,291	0/1:14,0:14:36.96:37,0,119	0/1:9,0:9:39.81:40,0,79	0/1:10,0:9:28.79:29,0,160	0/1:9,0:7:10.66:11,0,191	0/1:6,0:4:78.98:79,0,94	0/0:12,0:8:6.49:0,6,191	0/0:15,0:9:9.03:0,9,229	0/0:17,1:16:15.80:0,16,165	0/1:11,0:8:22.66:23,0,26	0/0:28,0:20:11.67:0,12,95	0/1:9,0:9:0.06:0,0,1	0/1:15,0:11:99:110,0,189	0/1:13,0:10:53.53:65,0,54	0/0:7,0:1:3.01:0,3,32
chr10	24487648	.	GTGTGGAGA	G	1827.08	PASS	AB=0.956;AC=23;AF=0.442;AN=52;BaseQRankSum=-2.432;DP=335;FS=22.621;HRun=0;HaplotypeScore=95.0997;InbreedingCoeff=-0.4453;MQ=38.47;MQ0=51;MQRankSum=-5.286;QD=7.52;ReadPosRankSum=-1.136;VQSLOD=0.0737;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:20,0:16:99:216,0,127	0/1:5,0:5:10.50:85,0,10	./.	./.	0/1:10,0:8:14.92:15,0,108	0/1:14,0:13:52.17:52,0,81	0/1:17,0:12:28.39:95,0,28	1/1:16,0:12:23.96:281,24,0	0/1:12,0:10:13.31:13,0,102	0/1:10,6:7:54.11:203,0,54	0/0:5,2:6:2.42:0,2,37	0/0:10,0:8:8.92:0,9,91	1/1:4,0:5:6.02:75,6,0	0/1:16,2:17:99:187,0,291	0/1:15,0:13:57.11:57,0,119	0/1:6,0:7:35.47:122,0,35	0/1:10,0:9:55.87:56,0,73	0/1:9,0:7:15.06:15,0,76	0/1:6,0:4:58.30:113,0,58	0/0:10,0:7:6.02:0,6,137	0/0:15,0:9:9.03:0,9,155	0/1:16,0:15:25.11:25,0,148	0/1:9,0:6:22.66:23,0,26	0/0:20,7:20:11.95:0,12,96	1/1:6,0:7:1.18:43,1,0	0/1:14,1:11:99:141,0,163	0/1:12,2:11:99:162,0,116	0/0:7,0:1:3.01:0,3,32
chr10	24487652	.	GGAGA	G	1664.92	PASS	AB=1.000;AC=23;AF=0.460;AN=50;BaseQRankSum=-1.814;DP=323;FS=23.873;HRun=0;HaplotypeScore=81.1523;InbreedingCoeff=0.0965;MQ=39.32;MQ0=52;MQRankSum=-4.233;QD=8.41;ReadPosRankSum=0.175;VQSLOD=0.8637;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:19:38.60:467,39,0	0/1:6,0:6:26.14:35,0,26	./.	./.	0/1:8,0:6:14.92:15,0,108	0/0:12,0:11:11.05:0,11,154	0/1:17,0:11:30.65:43,0,31	1/1:7,9:12:23.96:281,24,0	1/1:11,0:9:15.05:237,15,0	0/1:16,0:7:57.36:107,0,57	0/0:7,0:6:2.82:0,3,37	0/0:11,0:8:9.01:0,9,90	1/1:6,0:5:5.85:53,6,0	0/1:19,0:18:46.59:47,0,322	0/1:17,0:15:23.91:24,0,186	0/0:5,0:5:8.98:0,9,73	1/1:8,0:7:11.88:179,12,0	1/1:7,0:5:9.01:114,9,0	1/1:6,0:4:5.68:90,6,0	./.	0/0:8,0:5:0:0,0,0	0/0:16,0:15:18.16:0,18,169	0/1:9,0:6:22.66:23,0,26	0/0:25,0:19:11.94:0,12,96	0/0:5,1:7:1.25:0,1,3	0/1:15,0:11:84.72:85,0,154	0/1:14,0:11:27.86:28,0,118	0/0:7,0:1:3.01:0,3,32
chr10	24487668	.	AGAAAG	A	70.22	PASS	AB=0.927;AC=7;AF=0.135;AN=52;BaseQRankSum=2.524;DP=331;FS=0.000;HRun=0;HaplotypeScore=104.6848;InbreedingCoeff=0.3103;MQ=41.76;MQ0=43;MQRankSum=0.303;QD=1.25;ReadPosRankSum=0.436;VQSLOD=1.8746;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:20,0:17:2.96:3,0,135	0/0:6,0:6:11.63:0,12,141	./.	./.	0/0:9,0:7:15.04:0,15,301	0/0:13,0:12:17.95:0,18,294	0/0:14,0:9:12.54:0,13,203	0/0:14,0:12:17.31:0,17,138	1/1:11,1:10:2.73:17,3,0	0/0:22,0:14:20.70:0,21,278	0/0:10,0:9:11.14:0,11,119	0/0:10,0:8:17.27:0,17,235	0/0:7,0:6:6.99:0,7,33	0/0:21,0:20:41.67:0,42,764	0/0:19,0:17:35.55:0,36,582	0/0:7,0:7:19.78:0,20,261	0/1:11,1:11:35.25:53,0,35	1/1:6,0:5:10.41:85,10,0	0/1:5,1:6:30.49:30,0,57	0/0:8,2:7:2.50:0,2,9	0/0:8,1:6:7.38:0,7,34	0/0:16,0:14:20.96:0,21,409	0/0:9,0:6:7.84:0,8,87	0/0:21,0:14:18.46:0,18,333	0/0:6,0:6:6.01:0,6,73	0/0:13,0:9:20.18:0,20,336	0/0:16,0:13:25.91:0,26,373	0/0:8,0:2:5.89:0,6,72
chr10	24488254	.	GT	G	1791.54	PASS	AC=38;AF=1.000;AN=38;DP=54;FS=0.000;HRun=1;HaplotypeScore=106.7048;InbreedingCoeff=-0.0408;MQ=28.29;MQ0=0;QD=33.80;VQSLOD=3.2532;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,3:3:3:26,3,0	1/1:0,2:2:6.02:83,6,0	./.	./.	1/1:0,2:2:6.02:77,6,0	1/1:0,2:2:6.02:72,6,0	1/1:0,1:1:2.22:7,2,0	./.	1/1:0,5:5:12.04:166,12,0	1/1:0,4:4:12.04:162,12,0	1/1:0,5:5:15.04:174,15,0	1/1:0,4:4:12.04:166,12,0	./.	1/1:0,1:1:3.01:41,3,0	1/1:0,4:4:12.04:161,12,0	./.	1/1:0,1:1:3.01:35,3,0	1/1:0,2:2:3.01:42,3,0	./.	1/1:0,5:5:15.05:193,15,0	./.	1/1:0,1:1:3.01:35,3,0	1/1:0,2:2:6.01:62,6,0	1/1:0,1:1:3.01:35,3,0	./.	1/1:0,3:3:9.03:125,9,0	1/1:1,4:5:15.05:203,15,0	./.
chr10	24488259	.	AG	A	1889.10	PASS	AC=38;AF=1.000;AN=38;DP=54;FS=0.000;HRun=1;HaplotypeScore=106.2171;InbreedingCoeff=-0.0418;MQ=28.29;MQ0=0;QD=35.64;VQSLOD=3.4151;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,3:3:3.01:33,3,0	1/1:0,2:2:6.02:83,6,0	./.	./.	1/1:0,2:2:6.02:83,6,0	1/1:0,2:2:6.02:83,6,0	1/1:0,1:1:2.22:7,2,0	./.	1/1:0,5:5:12.04:166,12,0	1/1:0,4:4:12.04:162,12,0	1/1:0,5:5:15.04:194,15,0	1/1:0,4:4:12.04:166,12,0	./.	1/1:0,1:1:3.01:41,3,0	1/1:0,4:4:12.04:166,12,0	./.	1/1:0,1:1:3.01:42,3,0	1/1:0,2:2:3.01:42,3,0	./.	1/1:0,5:5:15.05:205,15,0	./.	1/1:0,1:1:3.01:42,3,0	1/1:0,2:2:6.02:75,6,0	1/1:0,1:1:3.01:42,3,0	./.	1/1:0,3:3:9.03:125,9,0	1/1:0,5:5:15.05:206,15,0	./.
chr10	24488526	.	A	AACACAC	8382.97	PASS	AB=1.000;AC=46;AF=0.852;AN=54;BaseQRankSum=-3.515;DP=481;FS=4.655;HRun=0;HaplotypeScore=109.4204;InbreedingCoeff=0.4877;MQ=56.86;MQ0=12;MQRankSum=-3.392;QD=22.24;ReadPosRankSum=-0.580;VQSLOD=4.3381;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:39:44.15:0,44,973	./.	0/0:31,0:19:17.92:0,18,274	0/0:32,0:17:11.20:0,11,184	1/1:3,2:5:6.02:196,6,0	1/1:9,5:23:11.29:272,11,0	1/1:10,10:23:17.29:705,17,0	0/1:27,0:27:88.08:88,0,112	1/1:6,5:14:18.06:497,18,0	1/1:5,3:11:9.02:224,9,0	1/1:4,0:7:3.01:52,3,0	1/1:10,8:24:23.65:757,24,0	1/1:5,2:13:15.05:322,15,0	1/1:6,5:17:24:715,24,0	1/1:12,5:22:15.05:418,15,0	1/1:5,11:19:26.34:823,26,0	1/1:6,5:16:15.05:363,15,0	1/1:17,3:20:23.86:440,24,0	1/1:14,3:22:24.03:430,24,0	1/1:3,2:8:6.02:137,6,0	0/1:18,0:18:13.82:94,0,14	1/1:2,0:3:3.01:38,3,0	1/1:0,0:5:3.01:38,3,0	1/1:7,4:18:14.64:302,15,0	1/1:2,3:9:9.03:224,9,0	1/1:9,6:21:32.98:502,33,0	1/1:10,7:20:15.02:432,15,0	1/1:8,0:8:5.26:313,5,0
chr10	24488737	.	CATATATATATATATATAT	C	3030.23	PASS	AC=36;AF=0.900;AN=40;BaseQRankSum=3.136;DP=207;FS=5.702;HRun=0;HaplotypeScore=97.8264;InbreedingCoeff=0.3368;MQ=72.95;MQ0=1;MQRankSum=-0.701;QD=22.61;ReadPosRankSum=2.608;VQSLOD=1.5371;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	1/1:4,0:4:5.95:95,6,0	1/1:6,0:5:1.55:4,2,0	0/0:21,0:9:0:0,0,0	./.	1/1:11,2:13:3.53:238,4,0	1/1:4,0:4:8.96:149,9,0	0/0:20,0:20:20.34:0,20,141	1/1:5,0:6:8.93:275,9,0	1/1:6,7:13:17.76:518,18,0	1/1:3,5:8:6.02:294,6,0	1/1:7,0:7:8.90:63,9,0	1/1:4,5:9:3.01:74,3,0	1/1:7,3:10:14.91:382,15,0	./.	./.	1/1:5,0:4:2.94:18,3,0	./.	1/1:5,0:5:2.97:20,3,0	1/1:7,0:8:11.84:179,12,0	./.	1/1:3,0:3:3:25,3,0	1/1:4,0:4:8.93:95,9,0	./.	1/1:4,6:10:9.03:204,9,0	1/1:4,5:9:14.72:350,15,0	1/1:6,3:9:3.01:147,3,0	./.
chr10	24488759	.	T	TC	91.63	PASS	AB=0.875;AC=2;AF=0.043;AN=46;BaseQRankSum=-1.759;DP=159;FS=3.163;HRun=0;HaplotypeScore=52.6341;InbreedingCoeff=0.0554;MQ=66.99;MQ0=1;MQRankSum=1.862;QD=3.16;ReadPosRankSum=-3.388;VQSLOD=2.1317;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	0/0:4,0:4:9.02:0,9,92	0/1:8,0:4:5.09:5,0,45	0/0:27,0:5:0.47:0,0,1	0/0:6,0:6:3.01:0,3,33	0/0:9,0:9:14.32:0,14,122	0/0:4,0:4:12.03:0,12,138	0/1:14,7:21:99:163,0,260	0/0:5,0:4:0.05:0,0,8	0/0:7,0:7:16.14:0,16,124	0/0:8,0:8:7.75:0,8,57	0/0:5,0:5:8.99:0,9,77	0/0:8,0:8:6.02:0,6,72	0/0:7,0:6:16.75:0,17,130	./.	0/0:1,0:1:3.01:0,3,38	0/0:2,0:2:2.04:0,2,6	./.	0/0:1,0:1:1.55:0,2,4	0/0:4,0:4:9.71:0,10,34	./.	0/0:1,0:1:2.99:0,3,23	0/0:3,0:3:9:0,9,84	./.	0/0:8,0:8:12.02:0,12,121	0/0:10,0:10:28.79:0,29,308	0/0:6,0:6:2.37:0,2,8	0/0:1,0:1:3.01:0,3,41
chr10	24488779	.	CAT	C	292.93	PASS	AB=0.667;AC=11;AF=0.220;AN=50;BaseQRankSum=-0.349;DP=181;FS=2.610;HRun=0;HaplotypeScore=49.0115;InbreedingCoeff=0.5240;MQ=62.16;MQ0=1;MQRankSum=-1.457;QD=14.65;ReadPosRankSum=0.504;VQSLOD=2.9136;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,0:2:3.01:38,3,0	0/0:3,0:3:3.01:0,3,47	0/0:11,0:4:5.93:0,6,40	0/0:19,0:3:2.60:0,3,10	0/0:8,0:8:9.03:0,9,139	0/0:6,0:6:14.08:0,14,190	0/0:3,0:3:6.02:0,6,93	0/0:24,0:24:69.23:0,69,1073	1/1:0,3:3:6.01:60,6,0	0/0:8,0:8:13.33:0,13,123	0/0:9,0:9:12.66:0,13,140	0/0:3,0:3:3:0,3,25	0/0:11,0:11:9.50:0,10,141	0/0:10,0:9:19.13:0,19,243	0/0:2,0:2:3.01:0,3,47	0/0:2,0:2:3.01:0,3,48	./.	1/1:1,1:2:5.99:57,6,0	1/1:0,6:6:18.04:209,18,0	1/1:0,5:5:6.01:64,6,0	0/1:1,1:2:0:0,0,0	0/0:1,0:1:3.01:0,3,47	./.	./.	0/0:10,0:10:6.02:0,6,94	0/0:15,0:15:34.14:0,34,446	0/0:7,0:7:8.06:0,8,92	0/0:1,0:1:3.01:0,3,47
chr10	24490592	.	T	TG	4407.82	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=17.275;DP=546;FS=16.628;HRun=1;HaplotypeScore=207.8250;InbreedingCoeff=0.9847;MQ=47.36;MQ0=0;MQRankSum=-12.719;QD=12.74;ReadPosRankSum=3.986;VQSLOD=2.2081;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:18,1:19:17.44:154,17,0	1/1:7,1:8:21.75:126,22,0	0/0:31,0:24:63.11:0,63,774	0/0:13,0:9:19.37:0,19,210	1/1:22,0:21:37.77:216,38,0	1/1:18,1:19:43.22:213,43,0	1/1:11,0:11:21.26:171,21,0	0/0:26,0:26:75.24:0,75,961	0/0:22,0:22:66.21:0,66,857	1/1:23,2:25:49.67:270,50,0	1/1:16,1:17:38.29:317,38,0	1/1:16,1:17:42.61:250,43,0	1/1:24,3:27:72.12:406,72,0	1/1:22,1:23:61.51:291,62,0	1/1:15,2:17:34.27:206,34,0	1/1:21,0:21:57.96:323,58,0	0/0:23,0:23:69.22:0,69,891	0/0:20,0:20:57.18:0,57,738	0/0:18,0:17:48.15:0,48,610	0/0:32,0:32:90.28:0,90,1154	0/0:15,0:15:45.15:0,45,584	1/1:15,0:15:37.34:165,37,0	1/1:17,0:17:37.64:180,38,0	1/1:8,0:8:8.02:34,8,0	1/1:13,2:15:38.21:265,38,0	1/1:21,1:22:54.41:319,54,0	1/1:31,0:30:68.25:353,68,0	1/1:10,2:10:21.38:148,21,0
chr10	24490596	.	AATAG	A	11864.18	PASS	AB=0.594;AC=37;AF=0.661;AN=56;BaseQRankSum=18.075;DP=528;FS=15.544;HRun=0;HaplotypeScore=209.3402;InbreedingCoeff=0.8863;MQ=48.28;MQ0=0;MQRankSum=-13.849;QD=36.28;ReadPosRankSum=4.722;VQSLOD=3.8209;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:6,13:19:24.41:565,0,24	1/1:1,7:8:24:318,24,0	0/0:30,0:23:66.22:0,66,1752	0/0:11,0:8:3.82:0,4,430	1/1:2,20:21:51.08:639,51,0	1/1:3,15:18:47.72:673,48,0	1/1:5,5:10:20.81:236,21,0	0/0:26,0:26:75.24:0,75,1882	0/0:23,0:23:69.21:0,69,1685	1/1:5,19:24:62.51:935,63,0	1/1:6,10:16:41.21:521,41,0	1/1:4,12:16:45.08:639,45,0	1/1:5,21:26:74.69:1042,75,0	1/1:2,20:22:65.67:928,66,0	1/1:5,11:16:39.01:519,39,0	1/1:2,19:21:63:899,63,0	0/0:24,0:24:72.25:0,72,1912	0/0:19,0:19:54.15:0,54,1446	0/0:18,0:17:48.16:0,48,1234	0/0:34,0:34:99:0,102,2726	0/0:16,0:16:48.16:0,48,1329	1/1:1,13:14:39.13:586,39,0	1/1:0,15:15:45.09:625,45,0	1/1:3,5:8:9.03:135,9,0	1/1:4,9:13:35.16:451,35,0	1/1:3,18:21:61.89:921,62,0	1/1:6,21:28:66.12:984,66,0	1/1:6,4:8:20.95:248,21,0
chr10	24490598	.	T	TC	1679.23	PASS	AB=0.938;AC=37;AF=0.661;AN=56;BaseQRankSum=13.259;DP=487;FS=44.819;HRun=0;HaplotypeScore=207.5507;InbreedingCoeff=0.7825;MQ=48.91;MQ0=0;MQRankSum=-10.171;QD=5.77;ReadPosRankSum=-0.232;VQSLOD=1.5850;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:14,1:15:29.38:38,0,29	1/1:7,1:8:6.34:81,6,0	0/0:30,0:23:66:0,66,879	0/0:11,0:8:21.01:0,21,256	1/1:20,0:19:20.79:154,21,0	1/1:15,1:16:14.07:97,14,0	1/1:7,0:7:4.34:36,4,0	0/0:25,0:25:75.23:0,75,1017	0/0:21,0:21:63.21:0,63,878	1/1:19,2:21:44.99:188,45,0	1/1:13,1:14:15.70:198,16,0	1/1:13,1:14:9.21:86,9,0	1/1:21,3:24:14.77:167,15,0	1/1:20,1:21:2.85:50,3,0	1/1:11,2:13:11.37:100,11,0	1/1:21,0:21:16.72:69,17,0	0/0:24,0:24:72.24:0,72,1006	0/0:18,0:18:51.17:0,51,712	0/0:18,0:17:48.16:0,48,667	0/0:33,0:33:99:0,99,1385	0/0:16,0:16:48.15:0,48,654	1/1:13,0:13:4.76:20,5,0	1/1:15,0:15:15.10:101,15,0	1/1:5,0:5:0.99:4,1,0	1/1:10,2:12:18.79:154,19,0	1/1:20,1:21:39.83:171,40,0	1/1:22,1:22:14.89:77,15,0	1/1:6,2:8:10.46:94,10,0
chr10	24490604	.	CA	C	5432.11	PASS	AB=0.578;AC=35;AF=0.625;AN=56;BaseQRankSum=17.338;DP=468;FS=0.735;HRun=3;HaplotypeScore=189.3304;InbreedingCoeff=0.7539;MQ=48.77;MQ0=0;MQRankSum=-14.985;QD=19.47;ReadPosRankSum=6.734;VQSLOD=3.9562;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:3,13:16:8.39:247,0,8	1/1:1,7:8:0.66:118,1,0	0/0:29,0:24:63.14:0,63,841	0/0:11,0:8:21.06:0,21,300	1/1:1,20:20:45.06:297,45,0	1/1:0,15:15:40.65:318,41,0	1/1:0,5:5:10.36:90,10,0	0/0:22,0:22:63.21:0,63,942	0/0:17,0:17:51.17:0,51,762	1/1:2,19:21:40.82:454,41,0	1/1:0,10:10:26.42:193,26,0	1/1:0,12:12:35.82:269,36,0	1/1:3,21:24:52.60:487,53,0	1/1:1,20:21:62.60:463,63,0	1/1:1,11:12:14.11:207,14,0	1/1:0,19:19:56.74:431,57,0	0/0:23,0:23:69.20:0,69,1005	0/0:18,0:18:51.17:0,51,749	0/0:19,0:18:51.17:0,51,746	0/0:33,0:33:96.30:0,96,1400	0/0:17,0:17:51.17:0,51,764	1/1:1,13:14:40.34:290,40,0	1/1:0,15:15:37.17:280,37,0	0/1:2,5:7:3.77:54,0,4	1/1:1,9:10:10.48:186,10,0	1/1:0,18:18:53.94:448,54,0	1/1:4,21:25:66.57:524,67,0	0/1:2,4:6:19.56:76,0,20
chr10	24490642	.	GA	G	9823.81	PASS	AB=0.880;AC=37;AF=0.661;AN=56;BaseQRankSum=14.554;DP=568;FS=1.046;HRun=5;HaplotypeScore=150.7140;InbreedingCoeff=0.9229;MQ=51.31;MQ0=1;MQRankSum=-8.191;QD=27.44;ReadPosRankSum=3.900;VQSLOD=2.8591;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:19,3:22:9.97:10,0,597	1/1:0,5:5:15.04:170,15,0	0/0:16,0:14:35.31:0,35,439	0/0:11,0:10:30.06:0,30,385	1/1:2,19:20:51.14:577,51,0	1/1:2,16:18:48.14:543,48,0	1/1:0,8:8:18.01:190,18,0	0/0:35,0:35:96.31:0,96,1286	0/0:20,0:20:60.18:0,60,799	1/1:4,28:32:84.22:941,84,0	1/1:0,16:16:42.03:458,42,0	1/1:2,13:15:39.11:442,39,0	1/1:2,28:30:81.16:901,81,0	1/1:3,20:23:60.08:662,60,0	1/1:1,13:14:33.09:374,33,0	1/1:2,20:22:60.17:679,60,0	0/0:27,1:28:41.83:0,42,934	0/0:18,0:18:54.11:0,54,684	0/0:22,0:21:63.21:0,63,862	0/0:35,0:35:99:0,102,1349	0/0:25,0:25:75.25:0,75,1026	1/1:2,14:16:39.11:441,39,0	1/1:0,17:17:45.13:509,45,0	1/1:1,15:16:42.07:460,42,0	1/1:0,15:15:45.13:510,45,0	1/1:1,24:25:72.16:801,72,0	1/1:2,30:31:84.24:951,84,0	1/1:0,11:11:18.05:204,18,0
chr10	24490768	.	TA	T	12254.33	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=14.253;DP=610;FS=18.251;HRun=7;HaplotypeScore=103.5635;InbreedingCoeff=0.9940;MQ=63.50;MQ0=0;MQRankSum=-2.251;QD=26.81;ReadPosRankSum=-0.073;VQSLOD=3.2129;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,28:29:69.16:704,69,0	1/1:1,5:6:15.03:153,15,0	0/0:14,0:14:38.48:0,38,452	0/0:16,0:15:24.08:0,24,302	1/1:1,41:42:99:1254,123,0	1/1:4,26:30:72.16:734,72,0	1/1:2,17:19:48.10:490,48,0	1/1:5,31:36:90.20:918,90,0	0/0:6,0:6:18.06:0,18,226	1/1:1,39:40:99:1157,114,0	1/1:5,22:27:66.15:673,66,0	1/1:1,12:13:33.07:337,33,0	1/1:0,20:20:60.14:612,60,0	1/1:3,18:21:54.12:551,54,0	1/1:1,21:22:57.13:581,57,0	1/1:0,20:20:54.12:550,54,0	0/0:17,0:17:48.15:0,48,604	0/0:24,0:24:72.20:0,72,888	0/0:25,0:25:60.19:0,60,755	0/0:27,0:27:78.25:0,78,981	0/0:24,0:24:57.18:0,57,717	1/1:0,11:11:27.06:275,27,0	1/1:1,14:15:39.09:398,39,0	1/1:1,10:11:30.07:306,30,0	1/1:2,17:19:51.12:520,51,0	1/1:2,32:34:96.18:969,96,0	1/1:2,33:35:87.20:887,87,0	1/1:1,6:7:18.04:184,18,0
chr10	24492482	.	TA	T	383.69	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.832;DP=533;FS=0.864;HRun=9;HaplotypeScore=76.1904;InbreedingCoeff=0.9236;MQ=63.07;MQ0=1;MQRankSum=-3.044;QD=15.35;ReadPosRankSum=0.822;VQSLOD=3.9139;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,20:25:55.09:479,55,0	0/0:4,0:4:9.03:0,9,104	0/0:17,0:17:25.31:0,25,274	0/0:14,0:10:13.90:0,14,121	0/0:19,0:19:51.10:0,51,565	0/0:23,0:23:60.18:0,60,692	0/0:13,0:14:29.21:0,29,375	0/0:34,0:34:87.22:0,87,964	0/0:21,0:21:60.17:0,60,680	0/0:24,0:24:66.15:0,66,747	0/0:24,0:24:66.14:0,66,745	0/0:19,0:19:51.15:0,51,589	0/0:16,0:16:42.03:0,42,449	0/0:26,0:26:75.19:0,75,844	0/0:14,0:14:36.09:0,36,397	0/0:15,0:15:39.11:0,39,450	0/0:18,0:18:48.10:0,48,539	0/0:17,0:17:45.13:0,45,519	0/0:24,0:22:57.15:0,57,645	0/0:23,0:23:60.18:0,60,693	0/0:9,0:9:27.08:0,27,312	0/0:15,0:15:36.05:0,36,387	0/0:11,0:11:30.09:0,30,343	0/0:12,0:12:36.09:0,36,406	0/0:19,0:19:54.15:0,54,611	0/0:31,0:31:87.26:0,87,1001	0/0:31,0:31:72.12:0,72,805	0/0:14,0:14:36.10:0,36,407
chr10	24492692	.	AAC	A	4750.44	PASS	AB=0.990;AC=47;AF=0.839;AN=56;BaseQRankSum=7.906;DP=538;FS=24.799;HRun=0;HaplotypeScore=130.3919;InbreedingCoeff=0.0422;MQ=42.09;MQ0=62;MQRankSum=-6.088;QD=8.91;ReadPosRankSum=0.935;VQSLOD=2.7903;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:7:20.40:129,20,0	1/1:9,0:7:20.90:178,21,0	0/1:70,0:13:18.31:18,0,86	0/1:84,0:15:12.83:13,0,13	1/1:33,0:32:51.76:462,52,0	1/1:6,0:5:14.94:128,15,0	1/1:7,0:6:11.91:92,12,0	1/1:28,0:26:18.39:254,18,0	0/1:9,0:8:16.95:17,0,66	1/1:27,0:21:59.32:444,59,0	1/1:17,0:16:47.72:384,48,0	1/1:9,0:6:14.61:99,15,0	1/1:13,0:10:29.54:222,30,0	1/1:14,0:14:41.65:313,42,0	1/1:10,0:10:23.24:172,23,0	1/1:14,0:14:17.95:158,18,0	0/1:8,0:7:13.05:13,0,31	0/1:12,1:10:64.89:65,0,78	0/1:39,0:27:99:122,0,256	0/1:19,0:18:46.98:47,0,228	0/0:5,0:4:8.38:0,8,90	1/1:4,0:4:11.54:82,12,0	1/1:3,4:7:14.85:109,15,0	1/1:4,3:6:8.94:71,9,0	1/1:15,0:14:41.12:305,41,0	1/1:30,0:25:53.25:456,53,0	1/1:23,0:19:51.11:375,51,0	1/1:6,0:1:2.97:20,3,0
chr10	24492693	.	AC	A	4460.66	PASS	AB=0.988;AC=47;AF=0.839;AN=56;BaseQRankSum=7.467;DP=532;FS=28.326;HRun=1;HaplotypeScore=124.0128;InbreedingCoeff=0.0390;MQ=42.20;MQ0=61;MQRankSum=-4.762;QD=8.46;ReadPosRankSum=1.038;VQSLOD=0.7731;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:7:20.36:116,20,0	1/1:6,3:7:20.83:146,21,0	0/1:71,2:13:18.65:19,0,77	0/1:80,5:16:12.91:13,0,13	1/1:22,8:29:53.95:415,54,0	1/1:3,3:5:14.89:108,15,0	1/1:4,1:5:11.88:83,12,0	1/1:27,0:25:18.32:254,18,0	0/1:9,0:8:15.88:16,0,52	1/1:21,5:20:59.45:423,59,0	1/1:11,6:16:47.61:344,48,0	1/1:8,1:6:14.66:106,15,0	1/1:11,2:10:29.53:203,30,0	1/1:12,2:14:41.65:300,42,0	1/1:10,0:10:23.67:190,24,0	1/1:5,9:14:17.82:140,18,0	0/1:8,0:7:12.74:16,0,13	0/1:13,0:10:53.78:54,0,66	0/1:38,0:26:99:123,0,220	0/1:19,0:18:52.78:53,0,215	0/0:5,0:4:8.11:0,8,77	1/1:4,0:4:11.59:73,12,0	1/1:6,1:7:14.83:100,15,0	1/1:6,0:5:8.91:61,9,0	1/1:10,5:14:41.34:288,41,0	1/1:27,3:25:53.44:455,53,0	1/1:21,2:19:50.20:346,50,0	1/1:5,1:1:2.98:21,3,0
chr10	24492700	.	AAACCAAAAAG	A	6531.70	PASS	AB=0.974;AC=34;AF=0.607;AN=56;BaseQRankSum=4.911;DP=549;FS=8.831;HRun=0;HaplotypeScore=200.6657;InbreedingCoeff=0.2195;MQ=46.23;MQ0=48;MQRankSum=-5.653;QD=21.21;ReadPosRankSum=-1.603;VQSLOD=3.1388;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:10,0:8:12.66:24,0,13	0/1:8,0:7:17.98:143,0,18	0/0:84,0:17:29.59:0,30,487	0/0:102,0:23:8.78:0,9,189	0/1:21,7:27:62.12:409,0,62	1/1:10,0:10:8.23:276,8,0	1/1:6,0:6:4.19:168,4,0	1/1:26,0:25:36.84:749,37,0	0/1:8,0:7:8.87:9,0,229	1/1:25,0:23:24.75:880,25,0	1/1:17,0:17:8.49:446,8,0	0/1:7,0:6:17.62:25,0,18	1/1:9,0:9:2.25:161,2,0	0/1:15,0:15:1.79:348,0,2	0/1:10,0:10:2.74:379,0,3	0/1:15,0:16:41.43:201,0,41	0/0:10,0:9:17.76:0,18,363	0/0:11,0:9:16.82:0,17,575	0/0:31,0:23:67.38:0,67,1569	0/1:24,0:23:6.60:7,0,1363	0/0:3,0:3:9.03:0,9,378	1/1:5,0:5:1.08:73,1,0	1/1:8,0:8:15.87:219,16,0	1/1:5,0:5:12.01:144,12,0	1/1:18,0:18:20.49:469,20,0	1/1:26,0:23:22.81:822,23,0	0/1:21,0:19:1.78:543,0,2	1/1:4,0:2:2.88:40,3,0
chr10	24492701	.	AAC	A	4208.69	PASS	AB=0.967;AC=41;AF=0.732;AN=56;BaseQRankSum=8.857;DP=544;FS=1.550;HRun=0;HaplotypeScore=155.3154;InbreedingCoeff=0.6990;MQ=47.86;MQ0=39;MQRankSum=-7.573;QD=14.51;ReadPosRankSum=2.668;VQSLOD=3.8424;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:8,1:8:10.18:10,0,67	1/1:8,0:7:20.72:162,21,0	0/0:85,0:18:26.07:0,26,344	0/0:100,0:22:17.38:0,17,187	1/1:28,0:27:49.98:413,50,0	1/1:9,1:10:20.54:162,21,0	1/1:6,0:6:14.83:108,15,0	1/1:26,0:25:13.28:242,13,0	0/1:8,0:7:5.52:6,0,107	1/1:26,0:23:60.95:441,61,0	1/1:15,2:17:50.54:383,51,0	1/1:7,0:6:8.06:58,8,0	1/1:9,0:9:22.84:169,23,0	1/1:14,0:15:37.57:273,38,0	1/1:10,0:10:26.52:176,27,0	1/1:16,0:16:21.05:158,21,0	0/1:10,0:9:0.13:0,0,147	0/0:11,0:9:1.90:0,2,254	0/0:28,0:24:62.13:0,62,912	0/0:23,0:23:39.02:0,39,743	0/0:4,0:4:9.03:0,9,173	1/1:5,0:5:14.48:94,14,0	1/1:8,0:8:13.69:101,14,0	1/1:5,0:5:11.77:71,12,0	1/1:18,0:18:45.27:316,45,0	1/1:25,0:23:65.27:469,65,0	1/1:20,0:19:52.59:378,53,0	1/1:4,0:2:2.94:19,3,0
chr10	24492702	.	AC	A	3937.37	PASS	AB=0.955;AC=40;AF=0.714;AN=56;BaseQRankSum=8.457;DP=540;FS=0.981;HRun=2;HaplotypeScore=149.6149;InbreedingCoeff=0.7461;MQ=47.96;MQ0=36;MQRankSum=-7.537;QD=14.32;ReadPosRankSum=2.864;VQSLOD=3.5513;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:8:17.13:0,17,95	1/1:4,3:7:20.54:125,21,0	0/0:87,0:18:17.02:0,17,254	0/0:101,2:22:4.77:0,5,146	1/1:19,8:27:58.89:369,59,0	1/1:8,2:10:23.53:157,24,0	1/1:5,1:6:14.79:97,15,0	1/1:21,0:21:46.88:284,47,0	0/1:8,0:7:1.45:1,0,76	1/1:21,3:23:61.04:408,61,0	1/1:13,4:17:50.37:341,50,0	1/1:6,1:6:8.68:64,9,0	1/1:7,2:9:23.12:145,23,0	1/1:10,2:15:37.80:252,38,0	1/1:10,0:10:26.38:196,26,0	1/1:12,1:15:20.49:137,20,0	0/0:8,0:8:1.30:0,1,106	0/1:9,1:9:17.78:18,0,186	0/0:25,0:24:61.78:0,62,701	0/0:23,0:23:38.76:0,39,544	0/0:4,0:4:9.03:0,9,127	1/1:3,0:5:14.54:83,15,0	1/1:7,1:8:13.43:89,13,0	1/1:5,0:5:11.73:70,12,0	1/1:15,2:18:45.86:284,46,0	1/1:21,1:23:65.12:444,65,0	1/1:15,2:19:52.51:334,53,0	1/1:3,1:2:5.92:39,6,0
chr10	24492733	.	A	AAAAAC	2172.67	PASS	AB=0.956;AC=22;AF=0.393;AN=56;BaseQRankSum=-6.360;DP=535;FS=7.702;HRun=0;HaplotypeScore=204.1965;InbreedingCoeff=0.0692;MQ=41.36;MQ0=25;MQRankSum=1.357;QD=6.56;ReadPosRankSum=1.309;VQSLOD=1.9295;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:3,0:3:2.34:15,0,2	0/1:8,0:8:2.89:3,0,30	0/1:84,0:17:8.36:8,0,30	0/0:107,0:28:13.26:0,13,118	0/1:26,0:26:16.96:17,0,50	0/0:17,0:16:11.70:0,12,87	0/1:10,0:10:17.94:23,0,18	1/1:21,0:17:8.68:41,9,0	1/1:0,7:7:3.01:85,3,0	0/1:21,0:21:29.67:30,0,65	0/1:23,0:23:52.33:52,0,75	0/0:5,0:5:5.02:0,5,20	0/0:6,0:6:12.17:0,12,66	0/0:16,0:16:7.63:0,8,149	0/0:12,0:12:13.64:0,14,61	0/1:15,0:15:5.35:5,0,6	0/1:2,5:8:12.11:79,0,12	0/1:8,1:9:3.24:178,0,3	1/1:19,3:22:20.60:553,21,0	1/1:7,14:23:25.60:1066,26,0	1/1:2,2:5:3.01:85,3,0	0/0:8,0:8:11.69:0,12,51	0/0:10,0:10:4.29:0,4,23	0/0:5,0:4:5.09:0,5,19	0/0:14,0:14:22.65:0,23,72	0/1:24,0:24:48.57:49,0,92	0/1:22,0:22:49.45:49,0,62	0/0:3,0:3:3.37:0,3,9
chr10	24492748	.	C	CAAA	8376.85	PASS	AB=1.000;AC=47;AF=0.839;AN=56;BaseQRankSum=5.874;DP=468;FS=6.208;HRun=4;HaplotypeScore=156.7901;InbreedingCoeff=0.2698;MQ=33.35;MQ0=23;MQRankSum=-2.778;QD=24.64;ReadPosRankSum=5.462;VQSLOD=1.4076;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,1:3:6.02:104,6,0	1/1:7,0:7:20.82:253,21,0	0/0:53,0:7:12.90:0,13,120	0/0:71,0:17:20.92:0,21,291	1/1:23,0:23:52.30:664,52,0	1/1:17,1:18:43.30:556,43,0	1/1:7,3:10:24.08:371,24,0	1/1:22,2:17:32.93:373,33,0	1/1:7,0:7:3.01:30,3,0	1/1:16,2:18:27.75:650,28,0	1/1:17,3:20:57.03:717,57,0	1/1:5,0:5:9.03:108,9,0	1/1:7,0:7:20.93:185,21,0	1/1:16,1:17:43.08:416,43,0	1/1:13,0:13:14.93:404,15,0	1/1:11,1:12:26.04:284,26,0	0/1:9,0:9:17.98:18,0,113	0/1:9,0:9:16.86:17,0,94	0/1:20,0:18:99:107,0,215	0/1:25,0:24:99:253,0,232	0/1:4,0:4:18.90:24,0,19	1/1:8,0:8:18.88:202,19,0	1/1:10,0:10:29.92:342,30,0	1/1:6,0:5:12.88:140,13,0	1/1:15,0:15:42.11:544,42,0	1/1:22,2:24:54.62:703,55,0	1/1:23,1:24:64.56:829,65,0	1/1:2,0:2:6.02:83,6,0
chr10	24492751	.	AAC	A	7469.11	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=9.167;DP=461;FS=2.348;HRun=0;HaplotypeScore=154.3810;InbreedingCoeff=0.8839;MQ=37.31;MQ0=16;MQRankSum=-6.077;QD=27.97;ReadPosRankSum=1.504;VQSLOD=5.7164;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,1:3:8.76:83,9,0	1/1:2,5:7:20.89:228,21,0	0/0:52,0:8:5.61:0,6,146	0/0:64,1:16:17.51:0,18,309	1/1:5,16:21:54.78:535,55,0	1/1:3,13:16:47.08:583,47,0	1/1:3,6:9:26.55:307,27,0	1/1:14,9:16:37.46:297,37,0	0/0:8,0:8:3.01:0,3,34	1/1:5,13:18:35.70:543,36,0	1/1:6,14:20:56.91:581,57,0	1/1:1,4:5:9.03:118,9,0	1/1:4,3:7:20.98:221,21,0	1/1:11,7:18:46.56:474,47,0	1/1:2,11:13:38.06:357,38,0	1/1:6,6:12:26.83:255,27,0	0/0:9,0:9:12.04:0,12,172	0/0:9,0:9:26.30:0,26,271	0/0:20,0:17:48.13:0,48,694	0/0:27,0:25:65.84:0,66,874	0/0:4,0:4:6.01:0,6,60	1/1:3,5:8:21.98:227,22,0	1/1:1,9:10:30.01:324,30,0	1/1:2,5:6:16.07:160,16,0	1/1:5,13:18:53.11:639,53,0	1/1:12,13:25:63.94:626,64,0	1/1:7,18:25:72.99:822,73,0	1/1:0,2:2:6.02:89,6,0
chr10	24492757	.	AC	A	5357.11	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=9.562;DP=431;FS=0.000;HRun=1;HaplotypeScore=155.1484;InbreedingCoeff=0.9251;MQ=44.20;MQ0=10;MQRankSum=-7.531;QD=20.37;ReadPosRankSum=3.540;VQSLOD=4.9624;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:4:11.90:97,12,0	1/1:7,1:8:23.24:178,23,0	0/0:41,1:9:15.69:0,16,165	0/0:44,0:14:17.98:0,18,219	1/1:18,3:21:38.72:395,39,0	1/1:14,2:16:47.02:377,47,0	1/1:8,1:9:26.81:224,27,0	1/1:17,6:16:26.76:230,27,0	0/0:10,0:10:9:0,9,82	1/1:16,2:18:44.45:384,44,0	1/1:17,0:18:53.43:416,53,0	1/1:4,0:4:8.25:62,8,0	1/1:5,2:7:20.45:147,20,0	1/1:13,2:15:44.32:330,44,0	1/1:11,2:13:38.16:284,38,0	1/1:9,2:11:26.83:210,27,0	0/0:10,0:10:10.57:0,11,114	0/0:10,0:10:12.35:0,12,150	0/0:19,0:16:45.29:0,45,418	0/0:26,0:24:62.28:0,62,537	0/0:5,0:5:9:0,9,92	1/1:5,3:8:22.48:177,22,0	1/1:10,1:11:29.21:227,29,0	1/1:5,2:6:14.08:86,14,0	1/1:13,6:19:56.04:480,56,0	1/1:18,4:22:54.37:407,54,0	1/1:21,6:27:78.35:591,78,0	1/1:2,0:2:6:55,6,0
chr10	24492758	.	C	CA	2574.65	PASS	AB=0.956;AC=39;AF=0.696;AN=56;BaseQRankSum=6.092;DP=432;FS=0.487;HRun=4;HaplotypeScore=164.7765;InbreedingCoeff=-0.3067;MQ=44.16;MQ0=10;MQRankSum=-3.340;QD=5.96;ReadPosRankSum=7.762;VQSLOD=-0.6396;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:5,0:5:10.15:13,0,10	1/1:8,0:8:11.36:90,11,0	0/1:40,1:7:7.19:7,0,77	0/1:40,1:13:3.75:4,0,136	0/1:21,1:22:3.52:170,0,4	1/1:16,0:16:12.93:188,13,0	1/1:9,0:9:10.73:109,11,0	0/1:22,1:16:56.46:78,0,56	0/1:9,0:9:20.19:20,0,43	1/1:18,1:19:23.32:196,23,0	1/1:18,0:18:39.76:200,40,0	1/1:4,0:4:6.29:33,6,0	1/1:7,0:7:1:25,1,0	0/1:15,0:15:2.89:56,0,3	0/1:12,1:13:2.14:95,0,2	1/1:11,0:11:2.83:67,3,0	0/1:10,0:10:4.09:4,0,63	0/1:9,2:11:72.86:99,0,73	0/1:16,4:17:99:183,0,126	0/1:26,0:24:99:265,0,173	0/1:5,0:5:5.72:6,0,63	0/1:8,0:8:20.89:54,0,21	1/1:10,1:11:9.87:83,10,0	0/1:6,0:6:14.59:21,0,15	1/1:19,0:19:8.14:175,8,0	0/1:21,1:22:29.98:135,0,30	0/1:27,1:28:0.25:301,0,0	1/1:1,1:2:5.95:43,6,0
chr10	24492759	.	AAAC	A	7916.77	PASS	AB=0.907;AC=42;AF=0.750;AN=56;BaseQRankSum=7.616;DP=431;FS=0.000;HRun=0;HaplotypeScore=159.5040;InbreedingCoeff=0.4674;MQ=44.48;MQ0=9;MQRankSum=-5.955;QD=24.51;ReadPosRankSum=2.984;VQSLOD=4.8825;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,1:6:9.33:94,9,0	1/1:3,5:8:19.61:262,20,0	0/0:42,1:7:0.25:0,0,145	0/0:41,0:14:3.35:0,3,143	0/1:9,13:22:4.70:500,0,5	1/1:3,13:16:47.17:640,47,0	1/1:3,6:9:26.51:321,27,0	1/1:16,5:16:37.01:342,37,0	0/0:9,0:9:9.03:0,9,138	1/1:9,10:19:28.83:591,29,0	1/1:4,14:18:53.57:579,54,0	1/1:2,2:4:8.06:95,8,0	1/1:4,3:7:16.36:192,16,0	1/1:9,6:15:40.95:389,41,0	1/1:4,10:14:41.33:427,41,0	1/1:6,6:12:26.90:301,27,0	0/0:10,0:10:13.26:0,13,167	0/1:9,0:9:66.94:67,0,198	0/1:21,0:18:87.73:88,0,500	0/1:26,0:24:67.12:67,0,701	0/0:5,0:5:9.03:0,9,168	1/1:3,5:8:21.73:245,22,0	1/1:3,8:11:27.05:311,27,0	1/1:4,2:5:10.46:104,10,0	1/1:7,12:19:53.60:706,54,0	1/1:11,11:22:48.83:547,49,0	1/1:11,17:28:79.32:951,79,0	1/1:1,1:2:6.02:98,6,0
chr10	24492762	.	C	CA	3908.35	PASS	AB=0.971;AC=41;AF=0.732;AN=56;BaseQRankSum=6.653;DP=407;FS=0.000;HRun=3;HaplotypeScore=151.3437;InbreedingCoeff=0.7697;MQ=46.24;MQ0=8;MQRankSum=-6.473;QD=13.67;ReadPosRankSum=3.242;VQSLOD=2.8466;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,0:6:5.89:27,6,0	1/1:6,1:7:13.43:141,13,0	0/0:36,0:8:6.90:0,7,76	0/1:32,0:12:6.17:6,0,28	1/1:18,4:22:9.11:263,9,0	1/1:13,2:15:43.88:268,44,0	1/1:6,1:7:20.51:125,21,0	1/1:12,7:16:39:279,39,0	0/0:8,0:8:8.05:0,8,69	1/1:11,4:15:34.11:307,34,0	1/1:17,0:17:43.71:224,44,0	1/1:4,0:3:4.82:30,5,0	1/1:4,3:7:12.41:89,12,0	1/1:13,3:16:28.01:171,28,0	1/1:12,3:15:41.03:250,41,0	1/1:8,3:11:26.67:201,27,0	0/0:11,0:11:4.27:0,4,87	0/0:8,0:9:8.98:0,9,129	0/0:22,0:19:42:0,42,385	0/0:28,0:26:46.53:0,47,431	0/0:5,0:5:9.02:0,9,97	1/1:6,3:9:21.21:136,21,0	1/1:9,1:10:25.53:156,26,0	1/1:3,2:4:11.02:54,11,0	1/1:13,6:19:53.83:397,54,0	1/1:14,5:19:33.37:251,33,0	1/1:20,7:27:71.66:494,72,0	1/1:2,0:2:5.89:37,6,0
chr10	24492765	.	AC	A	1589.32	PASS	AB=1.000;AC=34;AF=0.607;AN=56;BaseQRankSum=11.206;DP=406;FS=5.112;HRun=1;HaplotypeScore=155.7545;InbreedingCoeff=0.1069;MQ=48.79;MQ0=7;MQRankSum=-7.291;QD=5.70;ReadPosRankSum=6.064;VQSLOD=0.6907;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:7,0:7:21:21,0,40	1/1:7,0:7:16.09:73,16,0	0/0:30,1:8:8.98:0,9,71	0/0:23,3:7:0.94:0,1,19	1/1:22,0:22:2.56:111,3,0	1/1:15,0:15:3.54:158,4,0	1/1:8,0:8:2.14:75,2,0	0/1:21,0:18:11.26:11,0,91	0/0:8,0:8:11.60:0,12,98	0/1:18,0:18:0.14:122,0,0	1/1:18,0:18:19.37:131,19,0	1/1:4,0:3:8.75:69,9,0	1/1:7,0:7:11.42:58,11,0	1/1:14,3:17:4.30:141,4,0	0/1:15,0:15:18.55:57,0,19	1/1:12,0:12:5.77:53,6,0	0/0:11,0:11:4.61:0,5,91	0/1:10,0:10:12.60:13,0,155	0/0:20,0:17:34.56:0,35,374	0/0:28,0:26:47.43:0,47,514	0/1:6,0:6:7.11:7,0,91	0/1:9,0:9:31.34:52,0,31	1/1:9,1:10:9.76:66,10,0	0/1:5,0:4:21.69:24,0,22	1/1:20,0:20:10.55:165,11,0	0/1:19,0:19:24.93:91,0,25	0/1:27,0:27:9.55:224,0,10	1/1:2,0:2:5.83:37,6,0
chr10	24492770	.	A	AC	5911.46	PASS	AB=0.654;AC=33;AF=0.589;AN=56;BaseQRankSum=0.368;DP=411;FS=0.941;HRun=0;HaplotypeScore=141.8225;InbreedingCoeff=0.5058;MQ=56.04;MQ0=7;MQRankSum=-5.646;QD=21.11;ReadPosRankSum=6.787;VQSLOD=6.0144;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:17.92:0,18,165	0/1:3,5:8:0.48:151,0,0	0/0:28,0:8:14.85:0,15,108	0/0:25,0:11:1.46:0,1,29	0/1:7,16:23:15.02:339,0,15	1/1:2,14:16:31.12:438,31,0	1/1:2,6:8:18.81:223,19,0	1/1:8,16:21:39.74:552,40,0	0/0:8,0:8:11.95:0,12,142	1/1:5,15:20:15.05:488,15,0	1/1:8,13:21:21.69:410,22,0	1/1:2,2:3:7.26:65,7,0	0/1:1,5:6:1.96:138,0,2	0/1:7,9:16:12.56:318,0,13	0/1:5,10:15:39.58:213,0,40	1/1:6,7:13:17.45:248,17,0	0/1:9,1:10:3.22:3,0,146	0/0:9,0:9:25.13:0,25,279	0/0:20,0:17:39.69:0,40,556	0/0:27,0:25:68.51:0,69,734	0/0:5,0:5:10.84:0,11,115	1/1:1,8:9:8.53:266,9,0	1/1:3,8:11:8.38:169,8,0	1/1:0,4:4:12.03:137,12,0	1/1:0,20:20:46.37:595,46,0	0/1:11,10:21:0.54:350,0,1	1/1:7,22:29:44.54:756,45,0	1/1:1,1:2:5.93:54,6,0
chr10	24493144	.	GA	G	9084.18	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=12.738;DP=563;FS=3.523;HRun=10;HaplotypeScore=107.5221;InbreedingCoeff=0.9580;MQ=61.09;MQ0=1;MQRankSum=0.541;QD=21.08;ReadPosRankSum=3.143;VQSLOD=4.8779;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,0:19:32.59:96,33,0	1/1:0,8:9:23.03:188,23,0	0/0:12,0:9:7.72:0,8,132	0/0:10,0:10:4.17:0,4,177	1/1:3,28:31:74.95:651,75,0	1/1:2,27:29:74.98:651,75,0	1/1:0,11:11:29.99:260,30,0	1/1:9,33:42:95.87:820,96,0	0/0:15,0:15:16.59:0,17,349	1/1:1,31:32:89.92:771,90,0	1/1:3,21:24:59.93:514,60,0	1/1:3,12:15:35.98:313,36,0	1/1:0,16:16:41.99:365,42,0	1/1:2,17:19:50.98:443,51,0	1/1:1,17:18:47.99:417,48,0	1/1:0,19:19:56.99:495,57,0	0/0:14,0:14:39.09:0,39,422	0/0:18,0:18:19.19:0,19,406	0/0:23,0:23:62.99:0,63,670	0/0:29,0:31:87.02:0,87,921	0/0:7,0:8:23.90:0,24,247	1/1:2,22:24:32.85:514,33,0	1/1:2,26:28:65.99:573,66,0	1/1:2,8:10:23.99:208,24,0	1/1:0,18:18:50.98:442,51,0	1/1:4,17:21:50.92:428,51,0	1/1:4,27:31:77.97:677,78,0	1/1:3,12:14:29.98:260,30,0
chr10	24493455	.	C	CAA	701.04	PASS	AB=0.500;AC=21;AF=0.553;AN=38;BaseQRankSum=1.973;DP=143;FS=0.000;HRun=0;HaplotypeScore=24.4713;InbreedingCoeff=0.6753;MQ=54.93;MQ0=16;MQRankSum=1.293;QD=26.96;ReadPosRankSum=-5.040;VQSLOD=2.2263;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,0:2:6.01:75,6,0	1/1:1,0:1:3.01:52,3,0	0/0:10,0:4:7.80:0,8,90	0/0:16,0:6:18.06:0,18,275	./.	1/1:0,3:4:6.02:114,6,0	./.	./.	0/0:13,0:13:37.01:0,37,581	1/1:1,0:1:3.01:60,3,0	./.	1/1:2,0:2:5.99:50,6,0	0/1:0,2:2:0:0,0,0	1/1:2,0:2:6.02:102,6,0	1/1:0,2:2:3.01:55,3,0	./.	0/0:20,0:20:45.15:0,45,734	0/0:7,0:6:9.03:0,9,146	0/0:10,0:6:15.05:0,15,243	0/0:24,0:24:69.24:0,69,1116	0/0:14,0:14:39.13:0,39,600	1/1:0,3:4:6.02:98,6,0	1/1:0,3:3:3.01:61,3,0	./.	./.	1/1:3,0:3:9.03:181,9,0	./.	./.
chr10	24493545	.	A	ATC	5996.52	PASS	AB=1.000;AC=41;AF=0.732;AN=56;BaseQRankSum=10.352;DP=312;FS=8.591;HRun=0;HaplotypeScore=118.7401;InbreedingCoeff=0.8985;MQ=50.97;MQ0=16;MQRankSum=-4.650;QD=28.97;ReadPosRankSum=2.192;VQSLOD=6.6918;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:3:9.03:110,9,0	1/1:4,0:4:12:126,12,0	0/0:23,0:4:12:0,12,144	0/0:16,0:10:9.87:0,10,136	1/1:11,0:11:23.97:300,24,0	1/1:8,0:7:21.05:237,21,0	1/1:10,0:6:18.06:231,18,0	1/1:13,0:6:15.04:194,15,0	0/0:10,0:10:24.08:0,24,326	1/1:13,7:19:57.18:755,57,0	1/1:13,4:18:48.03:552,48,0	1/1:5,0:5:14.71:153,15,0	1/1:8,0:8:23.99:288,24,0	1/1:11,0:11:30.03:382,30,0	1/1:8,0:8:17.93:227,18,0	1/1:14,0:13:39.12:485,39,0	0/0:11,0:10:24.07:0,24,307	0/1:9,0:5:0.25:0,0,149	0/0:14,0:11:30.10:0,30,393	0/0:24,0:24:61.72:0,62,708	0/0:7,0:5:15.05:0,15,198	1/1:11,0:10:30.10:397,30,0	1/1:11,0:11:30.04:368,30,0	1/1:10,0:8:21:219,21,0	1/1:7,0:7:21.06:252,21,0	1/1:13,0:10:30.10:408,30,0	1/1:7,0:6:14.98:191,15,0	1/1:5,0:3:9.03:121,9,0
chr10	24493784	.	TAA	T	10233.04	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=5.614;DP=607;FS=2.529;HRun=11;HaplotypeScore=86.0177;InbreedingCoeff=0.9772;MQ=64.14;MQ0=4;MQRankSum=1.255;QD=24.25;ReadPosRankSum=5.773;VQSLOD=4.8143;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,1:25:57.75:271,58,0	1/1:0,10:11:26.70:267,27,0	0/0:18,1:20:41.59:0,42,553	0/0:11,0:10:27:0,27,342	1/1:3,20:23:45.03:479,45,0	1/1:1,25:26:66.16:702,66,0	1/1:0,17:17:45.11:479,45,0	0/0:8,0:27:46.66:0,47,173	0/0:12,0:12:33.08:0,33,483	1/1:0,26:26:75.17:791,75,0	1/1:4,22:24:54.11:575,54,0	1/1:0,22:22:63.16:670,63,0	1/1:3,25:28:66.15:701,66,0	1/1:2,17:19:42.10:447,42,0	1/1:3,18:21:45.10:479,45,0	1/1:2,17:19:4.94:465,5,0	0/0:28,0:28:78.21:0,78,1145	0/0:13,0:13:33.11:0,33,508	0/0:35,0:35:89.76:0,90,1267	0/0:23,0:25:68.64:0,69,935	0/0:13,0:13:30.06:0,30,400	1/1:4,21:24:54.11:575,54,0	1/1:2,25:26:72.18:766,72,0	1/1:3,16:19:42.10:447,42,0	1/1:2,20:22:54.12:575,54,0	1/1:1,17:18:51.13:543,51,0	1/1:2,30:34:83.68:854,84,0	1/1:5,8:13:14.95:147,15,0
chr10	24495306	.	T	TCCC	470.10	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-4.333;DP=552;FS=4.683;HRun=7;HaplotypeScore=77.0110;InbreedingCoeff=0.9430;MQ=79.80;MQ0=0;MQRankSum=-2.662;QD=22.39;ReadPosRankSum=0.077;VQSLOD=0.6337;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:9,12:21:28.65:564,29,0	0/0:4,0:4:12.04:0,12,156	0/0:15,0:15:39.10:0,39,511	0/0:11,0:11:33.08:0,33,419	0/0:29,0:29:78.25:0,78,1064	0/0:28,0:28:72.67:0,73,966	0/0:13,0:13:30.07:0,30,392	0/0:35,0:35:87.24:0,87,1145	0/0:26,0:26:72.07:0,72,917	0/0:23,0:23:57.17:0,57,778	0/0:33,0:33:78.23:0,78,1064	0/0:21,0:21:60.20:0,60,818	0/0:20,0:20:51.15:0,51,696	0/0:22,0:22:60.14:0,60,783	0/0:28,0:28:78.23:0,78,1048	0/0:19,0:19:51.15:0,51,696	0/0:12,0:12:36.12:0,36,491	0/0:6,0:6:18.03:0,18,227	0/0:28,0:28:72.20:0,72,956	0/0:29,0:29:81.26:0,81,1105	0/0:20,0:20:54.16:0,54,737	0/0:17,0:17:48.15:0,48,652	0/0:19,0:19:51.16:0,51,687	0/0:7,0:7:21.05:0,21,270	0/0:17,0:17:39.10:0,39,532	0/0:24,0:24:63.19:0,63,860	0/0:19,0:19:54.15:0,54,719	0/0:6,0:6:15.04:0,15,205
chr10	24496858	.	AT	A	9141.74	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=12.524;DP=544;FS=6.682;HRun=8;HaplotypeScore=52.7663;InbreedingCoeff=0.9964;MQ=70.58;MQ0=0;MQRankSum=-0.702;QD=26.12;ReadPosRankSum=3.638;VQSLOD=5.5510;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:33.10:0,33,399	1/1:0,10:10:30.05:290,30,0	0/0:5,0:5:15.04:0,15,178	0/0:10,0:10:27.02:0,27,308	1/1:3,27:30:69.09:666,69,0	1/1:2,21:23:63.10:608,63,0	1/1:2,12:14:33.05:319,33,0	0/0:36,0:36:96.29:0,96,1156	0/0:29,0:29:84.23:0,84,992	1/1:0,27:27:81.12:777,81,0	1/1:2,23:25:69.11:666,69,0	1/1:2,9:11:27.04:261,27,0	1/1:1,14:15:42.07:405,42,0	1/1:2,22:24:66.10:637,66,0	1/1:0,18:18:51.08:493,51,0	1/1:0,13:13:39.06:377,39,0	0/0:17,0:17:48.11:0,48,563	0/0:25,0:25:60.14:0,60,698	0/0:19,0:19:51.16:0,51,616	0/0:27,0:27:81.25:0,81,978	0/0:10,0:10:27.08:0,27,326	1/1:1,12:13:36.05:348,36,0	1/1:1,15:16:42.07:406,42,0	1/1:0,8:8:21.03:203,21,0	1/1:1,21:22:57.09:550,57,0	1/1:1,26:27:78.11:746,78,0	1/1:2,33:35:87.14:840,87,0	1/1:0,19:19:57.09:550,57,0
chr10	24497261	.	GTACAA	G	226.26	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.535;DP=601;FS=0.000;HRun=0;HaplotypeScore=106.5892;InbreedingCoeff=0.8843;MQ=90.40;MQ0=0;MQRankSum=-3.775;QD=32.32;ReadPosRankSum=0.685;VQSLOD=2.9869;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,6:7:15.05:315,15,0	0/0:7,0:7:21.07:0,21,651	0/0:24,0:24:69.24:0,69,1909	0/0:24,0:24:66.19:0,66,1890	0/0:24,0:24:72.24:0,72,2166	0/0:33,0:33:99:0,99,3005	0/0:9,0:9:24.08:0,24,744	0/0:35,0:35:93.32:0,93,2821	0/0:11,0:11:33.11:0,33,979	0/0:23,0:23:69.24:0,69,2118	0/0:34,0:34:90.31:0,90,2704	0/0:19,0:19:45.15:0,45,1352	0/0:22,0:22:57.18:0,57,1687	0/0:30,0:30:87.28:0,87,2586	0/0:23,0:23:69.24:0,69,2098	0/0:29,0:29:87.28:0,87,2604	0/0:26,0:26:75.23:0,75,2140	0/0:14,0:14:42.14:0,42,1226	0/0:21,0:21:57.20:0,57,1713	0/0:26,0:26:78.27:0,78,2364	0/0:17,0:17:51.18:0,51,1578	0/0:24,0:24:69.24:0,69,2098	0/0:20,0:20:57.20:0,57,1720	0/0:16,0:16:48.16:0,48,1463	0/0:28,0:28:84.28:0,84,2458	0/0:24,0:24:69.24:0,69,2037	0/0:26,0:26:78.27:0,78,2417	0/0:5,0:5:6.02:0,6,87
chr10	24497624	.	TAC	T	148.95	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.711;DP=375;FS=7.069;HRun=0;HaplotypeScore=46.4644;InbreedingCoeff=0.8217;MQ=78.27;MQ0=2;MQRankSum=-3.132;QD=16.55;ReadPosRankSum=0.956;VQSLOD=2.5583;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,6:8:18.06:239,18,0	0/0:6,0:6:15.05:0,15,256	0/0:18,0:15:23.27:0,23,363	0/0:17,0:13:22.49:0,22,241	0/0:27,0:27:75.17:0,75,1184	0/0:11,0:11:33.11:0,33,571	0/0:4,0:4:9.03:0,9,156	0/0:35,0:35:87.25:0,87,1373	0/0:11,0:11:30.10:0,30,515	0/0:16,0:16:36.12:0,36,621	0/0:22,0:22:60.21:0,60,1038	0/0:7,0:7:21.07:0,21,364	0/0:9,0:9:27.09:0,27,465	0/0:7,0:7:18.06:0,18,312	0/0:16,0:16:45.14:0,45,744	0/0:4,0:4:12.04:0,12,208	0/0:15,0:15:45.11:0,45,739	0/0:6,0:6:18.06:0,18,312	0/0:14,0:14:36.11:0,36,596	0/0:16,0:16:45.14:0,45,747	0/0:6,0:6:18.03:0,18,268	0/0:7,0:7:12.03:0,12,181	0/0:6,0:6:15.05:0,15,256	0/0:8,0:8:15.05:0,15,245	0/0:24,0:24:69.21:0,69,1134	0/0:22,0:22:66.23:0,66,1136	0/0:23,0:23:63.22:0,63,1080	0/0:9,0:9:27.09:0,27,467
chr10	24498241	.	T	TC	16599.44	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-14.652;DP=713;FS=2.458;HRun=6;HaplotypeScore=61.9220;InbreedingCoeff=0.9960;MQ=84.42;MQ0=0;MQRankSum=-3.146;QD=30.68;ReadPosRankSum=3.435;VQSLOD=5.4885;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,31:33:75.24:939,75,0	1/1:0,7:7:21.07:263,21,0	0/0:21,0:21:18.34:0,18,361	0/0:23,0:22:43.25:0,43,467	1/1:4,25:29:72.09:857,72,0	1/1:2,37:39:87.28:1089,87,0	1/1:6,15:21:36.12:451,36,0	1/1:1,36:37:99:1213,102,0	0/0:25,0:25:72.15:0,72,728	1/1:2,26:28:78.21:929,78,0	1/1:2,23:25:60.11:730,60,0	1/1:3,30:33:78.22:960,78,0	1/1:0,32:32:90.29:1127,90,0	1/1:2,28:30:41.72:833,42,0	1/1:1,39:40:99:1255,102,0	1/1:1,34:35:90.29:1127,90,0	0/0:22,0:22:54:0,54,514	0/0:9,0:9:21.03:0,21,208	0/0:20,0:20:42.09:0,42,428	0/0:24,0:24:69.14:0,69,697	0/0:28,0:28:75.12:0,75,748	1/1:0,15:15:45.06:543,45,0	1/1:1,18:19:45.06:542,45,0	1/1:1,23:24:66.21:826,66,0	1/1:2,23:25:50.15:773,50,0	1/1:2,24:26:69.20:837,69,0	1/1:2,34:36:87.28:1080,87,0	1/1:0,7:7:18.06:225,18,0
chr10	24498625	.	A	AT	12799.28	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-16.327;DP=652;FS=2.737;HRun=8;HaplotypeScore=56.3017;InbreedingCoeff=0.9784;MQ=79.80;MQ0=0;MQRankSum=-2.134;QD=29.09;ReadPosRankSum=4.503;VQSLOD=4.9950;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:72.01:0,72,652	1/1:0,10:10:21.06:242,21,0	0/0:18,0:18:15.45:0,15,303	0/0:12,0:12:18.94:0,19,165	1/1:5,24:29:72.17:816,72,0	1/1:5,23:28:63.19:727,63,0	1/1:0,21:21:54.16:623,54,0	0/0:32,0:33:92.08:0,92,830	0/0:30,0:30:84:0,84,758	1/1:6,30:37:96.27:1095,96,0	1/1:3,26:29:72.13:801,72,0	1/1:1,19:20:57.17:658,57,0	1/1:5,20:25:35.72:665,36,0	1/1:1,29:30:78.23:900,78,0	1/1:3,34:37:99:1177,102,0	1/1:3,21:24:5.25:568,5,0	0/0:17,0:17:48.02:0,48,439	0/0:15,0:15:39.02:0,39,357	0/0:23,0:23:54.02:0,54,494	0/0:23,0:23:69.01:0,69,622	0/0:15,0:15:45.02:0,45,412	1/1:4,13:17:39.12:450,39,0	1/1:1,16:17:48.14:554,48,0	1/1:1,22:23:63.19:727,63,0	1/1:3,24:27:66.20:762,66,0	1/1:1,23:24:66.13:717,66,0	1/1:1,23:24:66.20:762,66,0	1/1:2,16:18:48.14:554,48,0
chr10	24500992	.	T	TGAG	741.02	PASS	AB=0.727;AC=1;AF=0.018;AN=56;BaseQRankSum=5.858;DP=594;FS=0.000;HRun=0;HaplotypeScore=90.6240;InbreedingCoeff=-0.0219;MQ=70.62;MQ0=0;MQRankSum=-5.558;QD=23.16;ReadPosRankSum=-0.225;VQSLOD=3.0944;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:20,12:30:99:815,0,200	0/0:2,0:2:6.02:0,6,104	0/0:26,0:25:49.86:0,50,1056	0/0:19,0:19:38.86:0,39,653	0/0:27,0:27:78.24:0,78,1319	0/0:22,0:22:63.22:0,63,1112	0/0:20,0:20:54.18:0,54,953	0/0:26,0:26:75.26:0,75,1310	0/0:17,0:17:51.17:0,51,900	0/0:17,0:18:51.17:0,51,895	0/0:14,0:14:42.14:0,42,720	0/0:18,0:18:51.17:0,51,897	0/0:21,0:21:60.17:0,60,999	0/0:31,0:31:93.27:0,93,1551	0/0:23,0:23:66.23:0,66,1156	0/0:19,0:19:57.20:0,57,1001	0/0:39,0:39:99:0,114,2012	0/0:19,0:19:54.18:0,54,937	0/0:21,0:21:57.17:0,57,967	0/0:20,0:20:57.17:0,57,944	0/0:30,0:30:87.30:0,87,1520	0/0:13,0:13:36.12:0,36,635	0/0:19,0:19:57.19:0,57,981	0/0:22,0:22:60.19:0,60,1023	0/0:12,0:12:33.10:0,33,547	0/0:21,0:21:57.20:0,57,989	0/0:27,0:26:78.25:0,78,1347	0/0:16,0:16:48.16:0,48,847
chr10	24500994	.	C	CAGCTGA	955.97	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.362;DP=590;FS=1.867;HRun=0;HaplotypeScore=123.0876;InbreedingCoeff=0.9049;MQ=71.91;MQ0=0;MQRankSum=-4.777;QD=38.24;ReadPosRankSum=-2.463;VQSLOD=2.9599;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:13,12:23:46.17:1051,46,0	0/0:2,0:2:6.02:0,6,130	0/0:29,0:28:68.35:0,68,1284	0/0:20,0:20:44.46:0,44,817	0/0:27,0:27:75.23:0,75,1659	0/0:22,0:22:63.22:0,63,1488	0/0:20,0:20:57.18:0,57,1317	0/0:27,0:27:72.20:0,72,1407	0/0:18,0:18:51.16:0,51,1176	0/0:17,0:17:51.18:0,51,1206	0/0:14,0:14:36.11:0,36,813	0/0:17,0:17:51.15:0,51,1065	0/0:19,0:19:57.18:0,57,1320	0/0:30,0:30:87.26:0,87,1873	0/0:22,0:22:63.20:0,63,1403	0/0:20,0:20:57.17:0,57,1252	0/0:40,0:40:99:0,117,2708	0/0:19,0:19:54.11:0,54,1194	0/0:20,0:20:60.15:0,60,1174	0/0:20,0:20:57.14:0,57,1180	0/0:30,0:30:87.26:0,87,1945	0/0:13,0:13:36.12:0,36,814	0/0:20,0:20:51.13:0,51,1078	0/0:22,0:22:63.17:0,63,1370	0/0:14,0:14:33.09:0,33,698	0/0:19,0:19:51.17:0,51,1178	0/0:28,0:27:78.20:0,78,1652	0/0:16,0:16:48.16:0,48,1152
chr10	24503774	.	C	CATATATAT	3124.72	PASS	AB=0.815;AC=29;AF=0.604;AN=48;BaseQRankSum=0.520;DP=186;FS=3.878;HRun=0;HaplotypeScore=50.8141;InbreedingCoeff=0.5296;MQ=75.36;MQ0=0;MQRankSum=-5.548;QD=29.20;ReadPosRankSum=-3.064;VQSLOD=2.1633;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:1,0:8:7.73:0,8,45	1/1:1,0:4:2.37:64,2,0	0/0:7,0:5:0.64:0,1,1	./.	0/1:4,0:4:0:0,0,0	1/1:1,0:5:9.03:195,9,0	1/1:1,0:2:3.01:65,3,0	1/1:16,6:34:57.16:1596,57,0	0/0:9,0:9:15.05:0,15,354	1/1:1,0:4:6.02:130,6,0	1/1:1,0:4:6.02:130,6,0	1/1:3,0:7:3.01:65,3,0	1/1:3,0:5:3.01:65,3,0	./.	1/1:5,0:5:3:25,3,0	1/1:3,0:6:9.03:195,9,0	0/0:8,0:9:27.09:0,27,642	0/0:10,0:10:30.10:0,30,770	0/0:10,0:10:30.06:0,30,727	0/0:8,0:8:12.04:0,12,314	0/0:6,0:6:12.04:0,12,246	./.	1/1:1,0:1:3.01:92,3,0	./.	1/1:2,0:6:9.03:195,9,0	1/1:0,0:3:6.02:130,6,0	0/1:5,0:10:66.54:183,0,67	0/1:5,0:7:1.57:155,0,2
chr10	24504118	.	GA	G	366.47	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.426;DP=473;FS=0.819;HRun=9;HaplotypeScore=53.3239;InbreedingCoeff=0.8868;MQ=77.12;MQ0=0;MQRankSum=0.489;QD=15.27;ReadPosRankSum=0.904;VQSLOD=3.5794;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,21:24:22.40:459,22,0	0/0:5,0:5:12.04:0,12,138	0/0:20,0:19:8.04:0,8,159	0/0:28,0:22:31.20:0,31,320	0/0:27,0:27:72.12:0,72,776	0/0:21,0:21:60.17:0,60,684	0/0:15,0:15:39.10:0,39,439	0/0:40,0:40:99:0,99,1130	0/0:11,0:11:27.06:0,27,301	0/0:14,0:14:36.11:0,36,416	0/0:10,0:11:23.12:0,23,297	0/0:15,0:15:42.12:0,42,476	0/0:19,0:19:54.14:0,54,606	0/0:9,0:9:18.05:0,18,208	0/0:12,0:13:35.93:0,36,385	0/0:13,0:14:38.95:0,39,430	0/0:14,0:14:36.09:0,36,405	0/0:12,0:12:35.59:0,36,390	0/0:23,0:23:60.14:0,60,661	0/0:19,0:19:51.15:0,51,589	0/0:15,0:15:33.10:0,33,381	0/0:12,0:12:30.07:0,30,331	0/0:8,0:8:21.04:0,21,226	0/0:7,0:7:21.06:0,21,242	0/0:18,0:18:32.86:0,33,424	0/0:20,0:20:51.14:0,51,574	0/0:24,0:24:60.16:0,60,681	0/0:13,0:13:39.12:0,39,450
chr10	24504231	.	GA	G	6250.52	PASS	AB=0.794;AC=41;AF=0.732;AN=56;BaseQRankSum=5.984;DP=545;FS=3.605;HRun=11;HaplotypeScore=59.3526;InbreedingCoeff=0.7770;MQ=64.55;MQ0=7;MQRankSum=1.323;QD=15.43;ReadPosRankSum=2.840;VQSLOD=5.6895;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,27:32:64.62:581,65,0	1/1:0,6:6:17.98:147,18,0	0/1:20,1:11:0.79:1,0,159	0/0:22,0:9:11.54:0,12,89	1/1:6,19:24:47.90:394,48,0	0/1:1,7:8:10.90:127,0,11	1/1:1,20:21:44.94:369,45,0	1/1:5,19:23:50.30:415,50,0	0/0:14,0:14:36.51:0,37,364	1/1:3,26:28:68.88:566,69,0	1/1:4,15:19:44.93:368,45,0	1/1:3,11:14:29.92:245,30,0	1/1:3,17:20:41.94:345,42,0	1/1:5,10:15:26.95:221,27,0	1/1:5,17:22:35.95:296,36,0	1/1:3,16:20:46.98:375,47,0	0/0:22,1:23:32.24:0,32,531	0/0:20,0:20:47.73:0,48,467	0/0:29,0:26:41.19:0,41,612	0/0:30,0:31:72:0,72,741	0/1:15,2:17:7.19:7,0,336	1/1:2,13:15:35.94:294,36,0	1/1:5,18:22:41.92:344,42,0	1/1:1,16:17:29.97:246,30,0	1/1:3,20:22:41.68:344,42,0	1/1:1,10:11:29.96:246,30,0	1/1:4,13:16:29.96:246,30,0	1/1:1,5:6:8.99:74,9,0
chr10	24505583	.	C	CAT	548.35	PASS	AB=0.835;AC=31;AF=0.554;AN=56;BaseQRankSum=5.374;DP=394;FS=4.325;HRun=0;HaplotypeScore=69.0588;InbreedingCoeff=0.3839;MQ=51.91;MQ0=8;MQRankSum=4.109;QD=2.56;ReadPosRankSum=-3.542;VQSLOD=0.5568;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:2.94:0,3,18	1/1:7,0:7:0.94:1,1,0	0/0:31,0:9:7.45:0,7,136	0/0:32,0:10:3.97:0,4,82	1/1:17,0:17:14.25:93,14,0	1/1:9,1:10:3.46:24,3,0	1/1:19,0:19:3.34:20,3,0	0/0:12,0:12:35.49:0,35,257	0/0:18,0:18:2.39:0,2,16	0/1:21,0:20:99:107,0,148	1/1:14,0:13:5.95:44,6,0	1/1:11,0:11:3.47:25,3,0	0/1:10,0:10:5.38:34,0,5	1/1:9,0:9:1.89:2,2,0	1/1:5,0:5:5.99:50,6,0	1/1:9,0:9:4.32:28,4,0	0/0:13,0:13:20.63:0,21,135	0/0:10,0:10:20.75:0,21,141	0/0:17,0:15:41.46:0,41,278	0/0:23,0:23:11.30:0,11,75	0/0:10,0:9:11.92:0,12,87	1/1:16,1:17:4.40:27,4,0	1/1:11,0:10:3.01:49,3,0	1/1:10,0:10:0.47:1,0,0	1/1:11,0:11:7.41:51,7,0	0/1:7,9:15:71.88:146,0,72	0/1:9,0:8:10.10:10,0,27	0/1:1,7:8:0:0,0,0
chr10	24505591	.	T	TACAC	338.85	PASS	AB=1.000;AC=27;AF=0.482;AN=56;BaseQRankSum=2.622;DP=454;FS=3.296;HRun=0;HaplotypeScore=97.6190;InbreedingCoeff=0.5538;MQ=45.44;MQ0=8;MQRankSum=0.622;QD=1.66;ReadPosRankSum=-1.920;VQSLOD=1.5854;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,13:16:3.01:74,3,0	0/0:7,0:7:2.97:0,3,20	0/0:30,0:8:11.12:0,11,146	0/0:34,0:13:12.05:0,12,151	1/1:18,0:18:1.88:5,2,0	1/1:13,0:13:5.99:49,6,0	1/1:20,0:20:2.73:19,3,0	0/0:17,0:17:39:0,39,513	0/0:20,0:20:8.74:0,9,104	1/1:24,0:23:8.90:68,9,0	0/0:16,0:15:0.45:0,0,1	1/1:12,0:12:0.47:1,0,0	1/1:12,0:12:0.89:2,1,0	1/1:11,0:11:2.99:24,3,0	0/0:9,0:9:0.30:0,0,1	1/1:8,0:8:0.47:1,0,0	0/0:16,0:16:17.85:0,18,216	0/0:13,0:13:23.50:0,24,309	0/0:20,0:18:17.21:0,17,296	0/0:27,0:27:26.82:0,27,308	0/0:14,0:13:0.06:0,0,207	1/1:20,0:20:0.38:1,0,0	1/1:15,0:14:8.29:71,8,0	0/0:13,0:13:2.52:0,3,19	0/0:14,0:14:0.40:0,0,1	1/1:18,0:17:12.47:137,12,0	1/1:9,0:8:6.34:36,6,0	0/1:8,0:8:0:0,0,0
chr10	24505964	.	AT	A	12247.14	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=12.210;DP=713;FS=0.316;HRun=8;HaplotypeScore=71.5497;InbreedingCoeff=0.9997;MQ=75.62;MQ0=0;MQRankSum=-1.552;QD=24.40;ReadPosRankSum=4.571;VQSLOD=5.3659;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,34:36:96.15:927,96,0	1/1:1,11:12:33.05:319,33,0	0/0:19,0:19:45.02:0,45,506	0/0:14,0:14:27.07:0,27,308	1/1:2,32:34:84.12:811,84,0	1/1:0,16:16:45.07:435,45,0	1/1:1,20:21:54.08:522,54,0	0/0:35,0:35:90.27:0,90,1077	0/0:19,0:19:54.17:0,54,652	1/1:1,35:36:99:1006,105,0	1/1:3,28:31:81.13:782,81,0	1/1:3,28:31:81.12:782,81,0	1/1:3,22:25:54.08:521,54,0	1/1:2,25:27:66.10:637,66,0	1/1:6,30:36:84.13:811,84,0	1/1:4,27:31:66.10:637,66,0	0/0:29,0:29:78.23:0,78,931	0/0:11,0:11:30.09:0,30,362	0/0:23,0:23:60.18:0,60,725	0/0:32,0:32:90.23:0,90,1070	0/0:29,0:29:78.21:0,78,928	1/1:3,18:21:51.08:493,51,0	1/1:2,22:24:54.08:522,54,0	1/1:1,17:18:48.08:464,48,0	1/1:4,18:22:54.08:521,54,0	1/1:2,24:26:72.12:695,72,0	1/1:3,40:43:99:1043,108,0	1/1:1,11:12:33.05:319,33,0
chr10	24507697	.	C	CTTGTGG	21962.49	PASS	AB=0.528;AC=39;AF=0.696;AN=56;BaseQRankSum=15.303;DP=415;FS=0.000;HRun=0;HaplotypeScore=214.2852;InbreedingCoeff=0.8727;MQ=85.51;MQ0=0;MQRankSum=-14.836;QD=84.47;ReadPosRankSum=5.729;VQSLOD=5.5598;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,4:4:12.04:357,12,0	1/1:0,9:9:27.09:793,27,0	0/0:13,0:13:39.13:0,39,963	0/0:26,0:26:75.21:0,75,1702	1/1:2,17:19:43.13:1474,43,0	1/1:1,11:12:36.12:1069,36,0	1/1:1,7:8:24.07:649,24,0	1/1:1,4:5:15.05:428,15,0	0/0:21,0:21:63.21:0,63,1533	1/1:0,15:19:57.16:1602,57,0	1/1:0,10:10:30.10:881,30,0	1/1:1,9:10:30.10:865,30,0	1/1:1,16:17:51.18:1526,51,0	1/1:1,16:17:51.18:1523,51,0	1/1:1,20:21:63.22:1879,63,0	0/1:2,17:19:19.67:1544,0,20	0/0:14,0:14:42.14:0,42,1050	0/0:17,0:17:50.38:0,50,1192	0/0:10,0:10:30.09:0,30,717	0/0:34,0:34:96.33:0,96,2435	0/0:20,0:20:60.21:0,60,1505	1/1:1,10:11:33.11:914,33,0	1/1:4,14:18:37.33:1388,37,0	1/1:0,8:8:4.88:509,5,0	1/1:2,12:14:42.12:1120,42,0	1/1:1,18:19:57.20:1699,57,0	1/1:2,16:18:54.19:1559,54,0	1/1:0,2:2:6.02:182,6,0
chr10	24507698	.	A	AAT	8469.52	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=16.570;DP=410;FS=2.151;HRun=0;HaplotypeScore=237.2633;InbreedingCoeff=0.9450;MQ=85.80;MQ0=0;MQRankSum=-14.999;QD=32.96;ReadPosRankSum=8.616;VQSLOD=5.0733;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:1,4:5:12.04:149,12,0	1/1:0,9:9:27.07:321,27,0	0/0:13,0:13:39.13:0,39,624	0/0:26,0:26:78.26:0,78,1229	1/1:2,17:19:47.17:538,47,0	1/1:1,11:12:28.10:407,28,0	1/1:0,7:7:21.07:259,21,0	1/1:1,4:5:12.04:165,12,0	0/0:20,0:20:60.20:0,60,977	1/1:3,16:19:49.04:652,49,0	1/1:0,10:10:30.09:360,30,0	1/1:1,9:10:7.12:277,7,0	1/1:1,16:17:50.65:603,51,0	1/1:1,16:17:30.30:566,30,0	1/1:1,20:21:62.87:751,63,0	1/1:2,17:19:8.89:605,9,0	0/0:14,0:14:42.14:0,42,685	0/0:16,0:16:48.16:0,48,774	0/0:9,0:9:27.09:0,27,441	0/0:34,0:34:99:0,102,1617	0/0:21,0:21:60.20:0,60,972	1/1:1,10:11:25.99:331,26,0	1/1:3,14:17:18.25:457,18,0	1/1:0,8:8:17.88:211,18,0	1/1:0,12:12:36.11:444,36,0	1/1:1,18:19:54.18:707,54,0	1/1:2,16:18:45.22:590,45,0	1/1:0,2:2:6.02:78,6,0
chr10	24507701	.	A	AT	6012.40	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=16.786;DP=424;FS=8.858;HRun=0;HaplotypeScore=247.7163;InbreedingCoeff=0.9595;MQ=88.32;MQ0=0;MQRankSum=-16.038;QD=22.69;ReadPosRankSum=8.228;VQSLOD=3.2921;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:2,4:6:11.99:104,12,0	1/1:1,8:9:26.59:221,27,0	0/0:16,0:16:45.11:0,45,579	0/0:27,0:27:81.16:0,81,1091	1/1:4,17:21:47.88:391,48,0	1/1:1,11:12:32.97:282,33,0	1/1:0,7:7:20.99:181,21,0	1/1:1,4:5:14.93:138,15,0	0/0:19,0:19:57.18:0,57,780	1/1:3,16:19:48.99:495,49,0	1/1:0,10:10:29.94:245,30,0	1/1:2,8:10:17.41:201,17,0	1/1:2,16:18:46.50:403,47,0	1/1:1,16:17:40.46:388,40,0	1/1:2,20:22:62.28:540,62,0	1/1:3,17:20:54.69:472,55,0	0/0:14,0:14:42.14:0,42,585	0/0:16,0:16:48.05:0,48,604	0/0:11,0:11:30.09:0,30,404	0/0:34,0:34:99:0,102,1409	0/0:22,0:22:66.12:0,66,877	1/1:2,10:12:7.93:197,8,0	1/1:3,14:17:33.25:319,33,0	1/1:1,8:9:20.44:151,20,0	1/1:2,12:14:41.71:330,42,0	1/1:0,18:18:54.06:513,54,0	1/1:1,16:17:35.22:387,35,0	1/1:0,2:2:6.01:56,6,0
chr10	24507704	.	T	TG	11363.62	PASS	AB=0.630;AC=39;AF=0.696;AN=56;BaseQRankSum=17.404;DP=552;FS=6.601;HRun=2;HaplotypeScore=324.9211;InbreedingCoeff=0.9220;MQ=79.41;MQ0=0;MQRankSum=-16.533;QD=28.99;ReadPosRankSum=4.707;VQSLOD=3.0545;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,4:10:24.05:263,24,0	1/1:0,9:9:27.06:279,27,0	0/0:17,0:17:45.13:0,45,610	0/0:27,0:27:78.26:0,78,1090	1/1:15,16:32:65.71:823,66,0	1/1:8,11:19:48.11:512,48,0	1/1:3,7:10:30.07:315,30,0	1/1:21,4:24:75.20:852,75,0	0/0:19,0:19:57.19:0,57,797	1/1:13,16:29:84.11:967,84,0	1/1:7,12:19:51.09:523,51,0	1/1:11,9:20:60.11:620,60,0	1/1:8,16:24:64.35:687,64,0	1/1:6,16:22:66.14:676,66,0	1/1:8,21:29:80.34:898,80,0	1/1:10,17:27:57.72:785,58,0	0/0:14,0:14:42.11:0,42,567	0/0:16,0:16:39.13:0,39,545	0/0:12,0:12:36.12:0,36,500	0/0:33,0:33:99:0,99,1385	0/0:22,0:22:63.21:0,63,880	0/1:7,10:17:5.92:398,0,6	1/1:8,14:22:26.31:483,26,0	1/1:3,8:11:24.03:232,24,0	1/1:4,12:16:48.03:502,48,0	1/1:7,18:25:75.14:813,75,0	1/1:7,16:23:48.89:638,49,0	1/1:1,2:3:9.02:98,9,0
chr10	24508321	.	C	CA	9814.12	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=8.583;DP=568;FS=1.238;HRun=9;HaplotypeScore=80.1317;InbreedingCoeff=0.9375;MQ=74.74;MQ0=0;MQRankSum=0.165;QD=24.47;ReadPosRankSum=2.472;VQSLOD=5.5382;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,6:14:29.97:278,30,0	1/1:3,10:13:24.06:266,24,0	0/0:12,1:11:2.97:0,3,30	0/0:9,0:8:3.05:0,3,40	1/1:1,32:33:90.63:970,91,0	1/1:0,24:26:65.84:692,66,0	1/1:3,10:13:21.06:232,21,0	0/0:32,0:32:59.46:0,59,651	0/0:20,0:20:50.97:0,51,438	1/1:4,28:33:83.59:904,84,0	1/1:1,23:25:65.97:698,66,0	1/1:5,16:21:19.07:439,19,0	1/1:2,18:20:25.08:505,25,0	1/1:2,16:18:27.07:299,27,0	1/1:5,21:26:48.13:531,48,0	1/1:2,16:18:42.11:465,42,0	0/0:18,0:18:44.95:0,45,386	0/0:13,0:14:23.01:0,23,188	0/0:25,0:25:68.98:0,69,599	0/0:29,0:29:80.96:0,81,699	0/0:7,0:7:17.98:0,18,152	1/1:2,16:18:45.08:484,45,0	1/1:5,21:27:59.98:633,60,0	1/1:2,6:8:17.97:183,18,0	1/1:3,16:19:19.07:439,19,0	1/1:5,23:28:69.16:748,69,0	1/1:1,27:28:73.75:800,74,0	1/1:3,10:13:24:250,24,0
chr10	24508332	.	AT	A	216.37	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.784;DP=577;FS=7.774;HRun=7;HaplotypeScore=114.7746;InbreedingCoeff=0.9406;MQ=69.57;MQ0=0;MQRankSum=-2.159;QD=14.42;ReadPosRankSum=0.188;VQSLOD=2.6947;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,8:15:35.79:311,36,0	0/0:15,0:15:42.13:0,42,528	0/0:7,0:5:11.23:0,11,98	0/0:9,0:8:13.60:0,14,120	0/0:35,0:35:96.27:0,96,1160	0/0:28,0:28:72.22:0,72,889	0/0:11,0:11:27.09:0,27,340	0/0:35,0:35:72.23:0,72,898	0/0:21,0:21:57.14:0,57,688	0/0:30,0:30:74.27:0,74,912	0/0:25,0:25:69.21:0,69,852	0/0:18,0:18:45.14:0,45,566	0/0:22,0:22:60.19:0,60,754	0/0:18,0:18:36.10:0,36,438	0/0:25,0:25:60.18:0,60,744	0/0:21,0:21:57.18:0,57,715	0/0:16,0:16:45.14:0,45,562	0/0:14,0:14:33.11:0,33,414	0/0:28,0:28:78.20:0,78,951	0/0:30,0:30:90.26:0,90,1106	0/0:9,0:9:27.09:0,27,339	0/0:21,0:21:45.14:0,45,566	0/0:26,0:26:63.20:0,63,792	0/0:10,0:10:26.44:0,26,298	0/0:22,0:22:57.18:0,57,717	0/0:24,0:24:57.16:0,57,693	0/0:29,0:29:80.82:0,81,961	0/0:13,0:13:27.09:0,27,340
chr10	24508612	.	A	AGT	1145.49	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-5.758;DP=674;FS=0.721;HRun=0;HaplotypeScore=78.3705;InbreedingCoeff=0.8640;MQ=69.90;MQ0=0;MQRankSum=0.427;QD=31.82;ReadPosRankSum=-4.605;VQSLOD=3.8952;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:72.23:0,72,916	0/0:11,0:11:33.11:0,33,420	0/0:14,0:13:23.46:0,23,324	0/0:16,0:15:4.82:0,5,194	0/0:36,0:36:99:0,102,1299	0/0:20,0:20:48.15:0,48,611	0/0:20,0:20:57.18:0,57,726	1/1:11,25:36:75.26:1240,75,0	0/0:27,0:27:75.23:0,75,941	0/0:38,0:38:99:0,105,1337	0/0:31,0:31:93.30:0,93,1184	0/0:24,0:24:66.21:0,66,840	0/0:25,0:25:57.15:0,57,697	0/0:25,0:25:60.19:0,60,764	0/0:28,0:28:69.20:0,69,864	0/0:19,0:19:54.17:0,54,688	0/0:14,0:14:36.12:0,36,458	0/0:12,0:12:13.12:0,13,359	0/0:19,0:19:39.12:0,39,485	0/0:31,0:31:87.25:0,87,1081	0/0:38,0:38:99:0,108,1348	0/0:20,0:20:54.14:0,54,660	0/0:16,0:17:50.99:0,51,625	0/0:26,0:26:69.15:0,69,821	0/0:24,0:24:63.20:0,63,802	0/0:30,0:30:81.24:0,81,1009	0/0:31,0:31:81.25:0,81,1017	0/0:15,0:15:42.13:0,42,535
chr10	24511935	.	CA	C	1287.48	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=8.080;DP=720;FS=0.000;HRun=1;HaplotypeScore=66.9291;InbreedingCoeff=0.9043;MQ=77.79;MQ0=0;MQRankSum=-4.557;QD=35.76;ReadPosRankSum=2.613;VQSLOD=3.9396;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,35:36:99:1382,101,0	0/0:12,0:12:36.12:0,36,571	0/0:14,0:15:29.85:0,30,418	0/0:19,0:19:53.79:0,54,728	0/0:30,0:30:90.24:0,90,1348	0/0:25,0:25:75.16:0,75,1073	0/0:17,0:17:51.16:0,51,786	0/0:24,0:24:72.20:0,72,1039	0/0:31,0:31:93.29:0,93,1428	0/0:37,0:37:99:0,108,1570	0/0:21,0:21:63.17:0,63,927	0/0:32,0:32:96.29:0,96,1453	0/0:37,0:37:99:0,111,1668	0/0:29,0:29:87.17:0,87,1275	0/0:32,0:32:95.89:0,96,1442	0/0:29,0:29:87.30:0,87,1379	0/0:22,0:22:66.19:0,66,1001	0/0:13,0:13:39.13:0,39,619	0/0:24,0:24:72.18:0,72,1016	0/0:35,0:35:99:0,100,1455	0/0:13,0:13:36.07:0,36,541	0/0:32,0:32:96.29:0,96,1445	0/0:19,0:19:57.17:0,57,859	0/0:32,0:32:90.13:0,90,1449	0/0:32,0:32:96.29:0,96,1455	0/0:42,0:42:99:0,126,1967	0/0:28,0:28:84.24:0,84,1266	0/0:2,0:2:6:0,6,71
chr10	24513442	.	AAAATAAAT	A	351.93	PASS	AC=6;AF=0.214;AN=28;BaseQRankSum=-2.762;DP=115;FS=1.631;HRun=0;HaplotypeScore=35.5682;InbreedingCoeff=0.4711;MQ=60.96;MQ0=3;MQRankSum=0.905;QD=11.35;ReadPosRankSum=1.462;VQSLOD=1.4192;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:6:5.98:0,6,47	0/0:1,0:1:3.01:0,3,49	./.	./.	./.	0/0:8,0:8:9.03:0,9,319	./.	0/0:18,0:15:2.97:0,3,20	./.	0/0:1,0:1:3.01:0,3,122	./.	./.	0/0:4,0:4:3.01:0,3,83	./.	./.	0/0:1,0:1:1.82:0,2,5	1/1:14,0:14:11.93:123,12,0	1/1:10,0:10:11.94:114,12,0	1/1:3,4:7:12.04:223,12,0	./.	./.	./.	./.	0/0:2,0:2:3.01:0,3,90	./.	0/0:1,0:2:3.01:0,3,92	0/0:2,0:2:3.01:0,3,94	0/0:6,0:5:9.03:0,9,265
chr10	24513482	.	T	TAAAC	824.66	PASS	AB=0.878;AC=24;AF=0.500;AN=48;BaseQRankSum=-4.296;DP=119;FS=9.612;HRun=0;HaplotypeScore=23.9652;InbreedingCoeff=0.3726;MQ=53.84;MQ0=2;MQRankSum=0.551;QD=14.99;ReadPosRankSum=-0.543;VQSLOD=1.2548;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:8:20.50:0,20,137	0/0:1,0:1:3.01:0,3,49	./.	0/0:1,0:1:2.97:0,3,20	1/1:4,0:4:11.99:117,12,0	0/1:4,0:4:3.92:100,0,4	1/1:2,0:2:3:25,3,0	0/0:11,0:10:26.44:0,26,201	0/0:1,0:1:3:0,3,25	0/0:1,0:1:2.74:0,3,12	1/1:3,0:3:5.99:48,6,0	1/1:1,0:1:2.99:24,3,0	1/1:3,0:3:9:98,9,0	1/1:5,0:5:14.90:113,15,0	1/1:1,0:1:2.99:24,3,0	1/1:2,0:2:6.01:94,6,0	0/0:13,0:13:34.15:0,34,232	0/0:12,0:12:26.70:0,27,202	0/0:12,0:11:32.93:0,33,291	0/0:1,0:1:3:0,3,25	./.	./.	1/1:1,0:1:3:25,3,0	0/1:4,0:4:37.03:59,0,37	./.	1/1:2,0:2:6.01:105,6,0	0/1:3,0:3:36.97:37,0,39	0/1:1,18:20:38.68:117,0,39
chr10	24514245	.	C	CG	369.06	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-1.970;DP=445;FS=0.000;HRun=8;HaplotypeScore=46.5264;InbreedingCoeff=0.9631;MQ=80.96;MQ0=0;MQRankSum=-0.413;QD=23.07;ReadPosRankSum=0.092;VQSLOD=3.8045;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,13:16:41.96:464,42,0	0/0:16,0:16:35.70:0,36,329	0/0:15,0:15:29.60:0,30,254	0/0:11,0:11:23.92:0,24,199	0/0:27,0:27:66.01:0,66,598	0/0:16,0:16:45:0,45,406	0/0:14,0:14:41.96:0,42,367	0/0:20,0:20:36:0,36,328	0/0:13,0:13:30:0,30,274	0/0:19,0:21:49.10:0,49,424	0/0:20,0:20:45.01:0,45,411	0/0:12,0:12:29.68:0,30,258	0/0:16,0:16:42:0,42,379	0/0:18,0:18:36.01:0,36,329	0/0:11,0:11:30.01:0,30,274	0/0:13,0:13:33.02:0,33,302	0/0:15,0:15:42.02:0,42,384	0/0:12,0:12:27.01:0,27,247	0/0:7,0:7:12:0,12,110	0/0:23,0:23:50.97:0,51,458	0/0:14,0:14:39:0,39,352	0/0:15,0:15:39.01:0,39,357	0/0:18,0:18:39.01:0,39,357	0/0:11,0:11:30.02:0,30,275	0/0:13,0:13:36.02:0,36,329	0/0:21,0:21:60.03:0,60,549	0/0:25,0:25:69.04:0,69,631	0/0:12,0:12:30.01:0,30,275
chr10	24514659	.	CT	C	7347.15	PASS	AC=36;AF=0.692;AN=52;BaseQRankSum=3.202;DP=430;FS=15.383;HRun=2;HaplotypeScore=52.9321;InbreedingCoeff=0.9881;MQ=49.62;MQ0=15;MQRankSum=6.221;QD=27.11;ReadPosRankSum=3.088;VQSLOD=3.2066;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:57.18:0,57,825	1/1:0,4:4:12.04:156,12,0	./.	./.	1/1:2,22:23:45.14:577,45,0	1/1:0,11:10:14.92:195,15,0	1/1:1,17:15:21.07:272,21,0	0/0:20,0:19:51.09:0,51,698	0/0:8,0:7:21.07:0,21,313	1/1:0,16:16:42.14:544,42,0	1/1:0,10:9:21.07:271,21,0	1/1:0,14:14:30.10:389,30,0	1/1:0,15:15:39.13:505,39,0	1/1:0,20:20:42.03:545,42,0	1/1:1,13:14:24.08:311,24,0	1/1:0,18:18:41.93:545,42,0	0/0:25,0:25:72.24:0,72,1070	0/0:12,0:11:27.07:0,27,380	0/0:20,0:19:57.12:0,57,802	0/0:22,0:21:60.20:0,60,898	0/0:17,0:17:42.13:0,42,609	1/1:1,11:11:27.09:351,27,0	1/1:0,19:18:35.70:467,36,0	1/1:0,17:15:30.10:389,30,0	1/1:0,19:17:45.15:584,45,0	1/1:0,15:13:39.13:506,39,0	1/1:0,15:14:36.12:467,36,0	1/1:1,9:9:21.07:273,21,0
chr10	24514694	.	TA	T	302.06	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-0.599;DP=498;FS=6.567;HRun=3;HaplotypeScore=76.6456;InbreedingCoeff=0.9598;MQ=54.81;MQ0=3;MQRankSum=-0.298;QD=25.17;ReadPosRankSum=-2.336;VQSLOD=1.9703;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:90.24:0,90,1241	0/0:5,0:5:15.05:0,15,216	0/0:8,0:5:15.05:0,15,216	0/0:7,0:6:18.06:0,18,259	0/0:22,0:21:54.18:0,54,777	0/0:13,0:12:33.03:0,33,430	0/0:23,0:20:45.13:0,45,628	1/1:1,11:11:33.09:397,33,0	0/0:9,0:9:27.09:0,27,389	0/0:20,0:20:57.17:0,57,801	0/0:12,0:12:36.12:0,36,518	0/0:14,0:14:36.12:0,36,518	0/0:17,0:17:51.17:0,51,734	0/0:18,0:18:51.17:0,51,734	0/0:14,0:14:39.13:0,39,561	0/0:18,0:18:51.17:0,51,734	0/0:26,0:26:75.25:0,75,1074	0/0:20,0:19:51.17:0,51,734	0/0:21,0:20:57.19:0,57,821	0/0:24,0:23:63.17:0,63,883	0/0:31,0:31:78.26:0,78,1118	0/0:11,0:11:33.10:0,33,458	0/0:20,0:20:51.17:0,51,734	0/0:21,0:20:45.12:0,45,627	0/0:25,0:23:60.20:0,60,855	0/0:19,0:17:48.15:0,48,675	0/0:21,0:20:57.15:0,57,796	0/0:14,0:14:36.12:0,36,518
chr10	24515832	.	A	AT	10821.21	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-10.471;DP=542;FS=0.000;HRun=8;HaplotypeScore=53.4909;InbreedingCoeff=0.9941;MQ=85.14;MQ0=0;MQRankSum=-5.621;QD=26.46;ReadPosRankSum=0.964;VQSLOD=5.3808;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,19:21:57.17:658,57,0	1/1:0,10:11:30.09:345,30,0	0/0:19,0:19:24.77:0,25,322	0/0:16,0:16:29.85:0,30,261	1/1:2,15:17:42.04:455,42,0	1/1:1,22:23:49.96:559,50,0	1/1:4,14:18:36.11:416,36,0	1/1:7,27:34:69.18:775,69,0	0/0:17,0:17:45.02:0,45,412	1/1:1,13:14:39.04:414,39,0	1/1:4,14:18:33.06:366,33,0	1/1:2,21:23:38.73:700,39,0	1/1:6,21:27:63.19:727,63,0	1/1:3,18:21:20.67:492,21,0	1/1:2,20:22:57.17:658,57,0	1/1:0,23:23:66.20:762,66,0	0/0:22,0:22:45.01:0,45,411	0/0:18,0:18:45:0,45,412	0/0:15,0:15:26.96:0,27,247	0/0:20,0:20:48:0,48,435	0/0:6,0:6:18.01:0,18,165	1/1:1,14:15:39.12:450,39,0	1/1:5,19:24:51.15:589,51,0	1/1:0,10:10:24.07:277,24,0	1/1:2,25:27:48.14:554,48,0	1/1:2,17:19:45.08:486,45,0	1/1:4,31:35:85.50:973,85,0	1/1:1,6:7:15.04:167,15,0
chr10	24516785	.	CA	C	1534.05	PASS	AB=0.675;AC=30;AF=0.536;AN=56;BaseQRankSum=-4.130;DP=535;FS=0.000;HRun=16;HaplotypeScore=78.3114;InbreedingCoeff=0.2557;MQ=73.92;MQ0=8;MQRankSum=-1.446;QD=4.24;ReadPosRankSum=3.306;VQSLOD=1.0679;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:22:16.48:0,16,167	1/1:2,8:10:8.72:54,9,0	0/0:35,0:13:8.70:0,9,78	0/1:27,1:17:15.50:21,0,15	1/1:11,14:28:7.15:118,7,0	1/1:3,12:15:7.14:154,7,0	0/1:8,7:16:5.11:80,0,5	0/1:12,9:22:9.97:44,0,10	0/0:7,0:15:26.60:0,27,160	1/1:6,10:16:23.36:143,23,0	1/1:9,13:23:17.27:111,17,0	1/1:2,6:8:8.81:54,9,0	0/1:7,5:14:25.89:28,0,26	1/1:7,9:16:17.41:108,17,0	0/1:9,12:24:26.48:75,0,26	0/1:10,5:18:24.99:51,0,25	0/0:5,0:16:10.80:0,11,78	0/0:9,0:18:23.16:0,23,141	0/0:8,1:16:7.91:0,8,104	0/0:16,0:36:69.83:0,70,426	0/0:13,0:13:14.69:0,15,95	0/1:4,6:11:14.38:31,0,14	1/1:2,8:10:14.61:89,15,0	0/1:1,7:12:2.27:72,0,2	0/1:11,13:27:18.59:96,0,19	1/1:3,10:14:9.36:103,9,0	0/1:15,13:28:34.71:156,0,35	1/1:6,10:17:24.57:137,25,0
chr10	24517120	.	T	TG	743.46	PASS	AB=0.942;AC=15;AF=0.268;AN=56;BaseQRankSum=4.421;DP=498;FS=8.756;HRun=0;HaplotypeScore=345.7562;InbreedingCoeff=-0.3734;MQ=86.80;MQ0=1;MQRankSum=-1.739;QD=2.78;ReadPosRankSum=-0.842;VQSLOD=1.1323;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:5:11.41:0,11,60	0/1:6,0:6:9.09:9,0,29	0/0:30,0:30:79.08:0,79,1037	0/0:18,0:18:48.08:0,48,597	0/1:21,0:20:10.04:10,0,120	0/0:29,0:29:8.10:0,8,148	0/1:7,7:14:26.14:26,0,53	0/1:18,4:22:99:114,0,120	0/0:17,0:17:51.17:0,51,706	0/1:17,0:16:56.94:57,0,67	0/1:25,0:25:60.42:60,0,103	0/1:16,2:18:80.17:80,0,80	0/1:18,0:18:44.29:44,0,82	0/1:18,0:18:20.57:21,0,97	0/1:22,0:22:53.19:111,0,53	0/1:10,0:10:13.47:13,0,20	0/0:10,0:10:30.08:0,30,400	0/0:14,0:14:39.05:0,39,500	0/0:22,0:22:66.21:0,66,907	0/0:40,0:40:99:0,114,1540	0/0:14,0:14:39.13:0,39,545	0/1:12,3:15:42.65:63,0,43	0/1:18,0:18:71.76:85,0,72	0/0:6,0:6:8.41:0,8,34	0/1:21,0:20:51.02:63,0,51	0/1:19,3:22:65.47:142,0,65	0/0:23,0:23:12.92:0,13,114	0/0:3,0:3:6.66:0,7,21
chr10	24517337	.	C	CT	806.75	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-2.071;DP=519;FS=0.000;HRun=6;HaplotypeScore=83.8102;InbreedingCoeff=0.9244;MQ=86.29;MQ0=0;MQRankSum=2.498;QD=27.82;ReadPosRankSum=-4.894;VQSLOD=1.5389;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:36.08:0,36,367	0/0:7,0:7:18.04:0,18,184	0/0:26,0:24:32.73:0,33,552	0/0:17,0:17:27.07:0,27,324	0/0:26,0:26:69.13:0,69,694	0/0:23,0:23:57:0,57,548	0/0:13,0:13:36.03:0,36,355	1/1:3,26:29:78.16:902,78,0	0/0:7,0:7:21.05:0,21,214	0/0:29,0:29:78.12:0,78,779	0/0:29,0:29:72.14:0,72,727	0/0:20,0:20:60.06:0,60,590	0/0:17,0:17:45.05:0,45,443	0/0:16,0:16:45.10:0,45,459	0/0:24,0:24:66.15:0,66,673	0/0:10,0:10:27.06:0,27,275	0/0:21,0:21:60.12:0,60,605	0/0:11,0:11:18.04:0,18,184	0/0:15,0:15:45.05:0,45,443	0/0:23,0:23:66.12:0,66,660	0/0:12,0:12:30.04:0,30,293	0/0:22,0:22:54.04:0,54,529	0/0:23,0:23:63.11:0,63,630	0/0:11,0:11:33.02:0,33,318	0/0:22,0:22:57.13:0,57,581	0/0:21,0:21:60.13:0,60,606	0/0:25,0:25:72.07:0,72,706	0/0:6,0:6:9.02:0,9,91
chr10	24519294	.	GAGAA	G	8120.95	PASS	AB=0.526;AC=35;AF=0.625;AN=56;BaseQRankSum=3.624;DP=468;FS=20.017;HRun=0;HaplotypeScore=83.5318;InbreedingCoeff=0.8951;MQ=64.28;MQ0=6;MQRankSum=2.683;QD=31.72;ReadPosRankSum=7.220;VQSLOD=2.6997;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:66.10:0,66,1336	1/1:1,6:7:12.04:210,12,0	0/0:24,0:14:6.98:0,7,204	0/0:25,0:13:18.03:0,18,297	1/1:3,12:15:30.10:509,30,0	1/1:2,16:18:30.10:525,30,0	1/1:3,13:16:21.01:349,21,0	0/0:41,0:41:99:0,99,1813	0/0:10,0:10:30.09:0,30,653	1/1:3,11:14:33.10:551,33,0	1/1:1,15:16:44.98:700,45,0	1/1:2,12:14:27.02:438,27,0	1/1:0,13:13:24.08:418,24,0	1/1:1,6:7:12.04:210,12,0	1/1:1,12:13:18.06:313,18,0	1/1:0,10:10:21.07:367,21,0	0/0:19,0:19:54.19:0,54,1352	0/0:21,0:21:57.03:0,57,1145	0/0:23,0:23:60.17:0,60,1179	0/0:10,0:10:27.07:0,27,548	0/0:12,0:12:33.07:0,33,639	1/1:1,5:6:12.04:205,12,0	1/1:1,14:15:27.09:472,27,0	0/1:2,18:20:14.33:291,0,14	1/1:2,16:18:33.11:577,33,0	1/1:3,20:23:57.15:935,57,0	1/1:1,12:13:21.07:367,21,0	1/1:1,17:18:39.13:683,39,0
chr10	24520233	.	T	TAC	2403.72	PASS	AB=0.836;AC=35;AF=0.625;AN=56;BaseQRankSum=8.628;DP=816;FS=0.000;HRun=0;HaplotypeScore=194.6581;InbreedingCoeff=0.4406;MQ=53.04;MQ0=18;MQRankSum=-0.598;QD=4.92;ReadPosRankSum=3.938;VQSLOD=2.6707;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:28:8.36:56,8,0	1/1:6,0:7:3.01:46,3,0	0/0:50,0:19:2.37:0,2,8	0/0:59,0:22:5.67:0,6,65	1/1:16,2:16:10.11:106,10,0	0/1:22,2:25:23.05:128,0,23	1/1:32,4:36:2.02:231,2,0	0/0:39,0:35:32.07:0,32,316	0/0:34,0:38:62.49:0,62,621	1/1:17,1:19:27.04:222,27,0	1/1:13,0:13:5.93:49,6,0	1/1:19,3:24:16.26:169,16,0	1/1:25,0:24:17.27:148,17,0	0/1:29,0:30:11.86:82,0,12	1/1:34,2:38:21.05:167,21,0	0/1:29,0:29:28.45:168,0,28	0/0:41,0:41:37.30:0,37,810	0/1:10,7:20:38.37:222,0,38	0/0:9,0:6:8.85:0,9,79	0/0:28,0:31:17.68:0,18,411	0/0:51,0:53:86.03:0,86,939	1/1:28,3:31:11.18:143,11,0	1/1:20,0:22:8.06:90,8,0	1/1:29,2:31:5.92:47,6,0	0/1:14,3:18:1.17:123,0,1	1/1:24,2:26:21.73:208,22,0	1/1:18,1:19:1.38:183,1,0	1/1:7,0:7:0.47:1,0,0
chr10	24520262	.	ACATACT	A	3100.43	PASS	AB=0.947;AC=22;AF=0.393;AN=56;BaseQRankSum=5.261;DP=885;FS=35.209;HRun=0;HaplotypeScore=233.8054;InbreedingCoeff=-0.2905;MQ=42.48;MQ0=28;MQRankSum=-0.052;QD=6.43;ReadPosRankSum=-4.535;VQSLOD=0.6095;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:20:10.51:117,11,0	1/1:4,1:5:2.84:14,3,0	0/0:54,0:9:19.86:0,20,301	0/0:62,0:11:22.08:0,22,449	0/1:17,3:18:88.62:120,0,89	0/1:18,2:19:99:162,0,267	0/1:30,1:25:99:105,0,141	0/0:40,0:32:80.06:0,80,1242	0/0:37,0:35:90.31:0,90,2443	0/1:28,2:24:99:401,0,462	0/1:13,1:13:59.62:60,0,95	0/1:24,2:25:99:107,0,322	0/1:31,0:28:99:236,0,285	0/1:28,2:28:99:204,0,186	0/1:41,4:41:95.17:431,0,95	0/1:32,4:32:99:218,0,288	0/0:51,0:49:99:0,106,3108	0/0:29,0:29:7.60:0,8,784	0/0:15,0:9:27.04:0,27,557	0/0:33,0:33:18.14:0,18,1775	0/0:82,0:79:99:0,158,4024	0/1:30,2:29:99:163,0,298	0/1:27,0:26:56.33:56,0,86	0/1:37,0:34:65.65:130,0,66	0/1:20,1:21:99:173,0,231	0/1:33,0:29:99:355,0,224	0/1:19,1:20:99:197,0,172	1/1:3,0:3:1.21:19,1,0
chr10	24520263	.	CAT	C	1978.94	PASS	AB=0.990;AC=26;AF=0.464;AN=56;BaseQRankSum=9.362;DP=880;FS=0.796;HRun=0;HaplotypeScore=200.5237;InbreedingCoeff=0.1343;MQ=42.45;MQ0=28;MQRankSum=2.483;QD=3.93;ReadPosRankSum=-2.459;VQSLOD=2.7258;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:20:10.83:64,11,0	0/0:5,0:5:1.25:0,1,3	0/0:53,0:9:20.49:0,20,172	0/0:63,0:12:14.71:0,15,267	0/1:20,0:18:13.39:68,0,13	0/1:19,1:19:22.52:35,0,23	0/1:30,1:25:27.26:27,0,58	0/0:39,0:31:80.45:0,80,881	0/0:37,0:35:47.87:0,48,1155	0/1:30,0:24:99:177,0,121	0/1:14,0:13:10.70:82,0,11	0/1:26,0:25:18.67:124,0,19	0/1:31,0:28:2.19:152,0,2	0/1:30,0:28:16.37:110,0,16	1/1:44,0:40:35.52:271,36,0	0/1:36,0:32:71.89:116,0,72	0/0:51,0:49:95.07:0,95,1695	0/1:27,0:27:1.48:1,0,337	0/0:15,0:9:18.91:0,19,241	0/0:32,0:32:50.90:0,51,981	0/0:82,0:79:89.70:0,90,2027	1/1:32,0:29:27.60:223,28,0	1/1:27,0:26:9.92:78,10,0	1/1:36,1:34:10.74:80,11,0	0/1:20,1:21:5.57:88,0,6	1/1:33,0:29:1.40:350,1,0	0/1:20,0:20:33.65:69,0,34	1/1:3,0:3:5.95:42,6,0
chr10	24520329	.	T	TACAC	17065.42	PASS	AB=1.000;AC=37;AF=0.661;AN=56;BaseQRankSum=-2.336;DP=927;FS=8.977;HRun=0;HaplotypeScore=225.4494;InbreedingCoeff=0.9589;MQ=46.90;MQ0=20;MQRankSum=5.773;QD=32.26;ReadPosRankSum=5.321;VQSLOD=3.4385;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:10,0:9:0.22:1,0,0	1/1:1,4:5:9.03:201,9,0	0/0:49,0:16:19.53:0,20,273	0/0:36,0:18:42.14:0,42,685	1/1:2,30:32:55.54:1324,56,0	1/1:5,11:16:17.77:405,18,0	1/1:6,25:31:47.68:1098,48,0	0/0:54,0:54:99:0,123,2040	0/0:40,0:40:99:0,105,1724	1/1:15,21:32:66.38:1594,66,0	1/1:9,14:23:20.16:446,20,0	1/1:12,20:33:44.88:1043,45,0	1/1:11,20:31:45.70:1042,46,0	1/1:6,25:30:35.80:858,36,0	1/1:13,29:41:44.94:1088,45,0	1/1:10,35:44:59.77:1483,60,0	0/0:36,0:34:66.16:0,66,1132	0/0:31,0:31:78.44:0,78,1276	0/0:15,0:13:30.10:0,30,512	0/0:28,0:28:28.37:0,28,1048	0/0:106,0:103:99:0,231,3800	1/1:12,18:30:38.92:799,39,0	1/1:7,29:35:53.87:1371,54,0	1/1:16,19:34:24.08:579,24,0	1/1:9,15:24:37.37:850,37,0	1/1:13,19:29:69.22:1618,69,0	1/1:8,9:19:20.41:367,20,0	1/1:2,13:15:36.12:900,36,0
chr10	24520391	.	AAC	A	8031.42	PASS	AB=0.728;AC=34;AF=0.607;AN=56;BaseQRankSum=14.080;DP=973;FS=1.391;HRun=0;HaplotypeScore=253.6415;InbreedingCoeff=0.6719;MQ=47.08;MQ0=32;MQRankSum=3.893;QD=14.24;ReadPosRankSum=5.885;VQSLOD=4.4631;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:22:3.94:0,4,39	1/1:6,13:17:6.20:301,6,0	0/0:39,0:9:14.98:0,15,217	0/1:37,0:7:4.70:5,0,75	1/1:13,22:35:8.49:540,8,0	1/1:2,13:14:21.02:249,21,0	1/1:12,11:19:21.89:251,22,0	0/0:57,0:47:99:0,126,1913	0/0:42,0:40:99:0,99,1507	1/1:24,16:33:24.56:699,25,0	1/1:7,22:28:32.68:409,33,0	1/1:14,14:26:23.76:237,24,0	1/1:9,19:26:51.88:550,52,0	1/1:13,17:28:32.76:349,33,0	1/1:16,30:45:16:435,16,0	1/1:10,24:32:47.75:549,48,0	0/0:29,0:29:69.24:0,69,1137	0/0:37,0:37:99:0,102,1590	0/0:22,0:11:27.09:0,27,452	0/0:35,0:35:74.82:0,75,1418	0/0:125,0:125:99:0,298,4746	1/1:13,26:37:60.18:761,60,0	0/1:9,17:23:28.04:378,0,28	0/1:18,23:39:67.47:231,0,67	1/1:13,25:36:53.86:764,54,0	1/1:12,21:29:66.14:833,66,0	0/1:6,6:11:13.32:261,0,13	1/1:5,6:11:18.06:229,18,0
chr10	24520403	.	CAT	C	3787.65	PASS	AB=1.000;AC=37;AF=0.661;AN=56;BaseQRankSum=17.242;DP=928;FS=9.879;HRun=0;HaplotypeScore=245.3837;InbreedingCoeff=0.6787;MQ=47.09;MQ0=38;MQRankSum=-0.551;QD=7.15;ReadPosRankSum=6.129;VQSLOD=1.4858;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:22:40.09:40,0,104	1/1:16,0:14:24.54:126,25,0	0/0:30,0:8:0.78:0,1,229	0/1:29,0:6:21.46:21,0,124	1/1:30,0:30:37.68:296,38,0	1/1:14,0:13:18.08:101,18,0	1/1:21,0:15:21.33:115,21,0	0/0:52,0:41:99:0,114,2145	0/0:44,0:42:99:0,107,1821	1/1:37,2:30:3.25:372,3,0	1/1:27,0:26:29.10:162,29,0	1/1:21,0:19:20.05:127,20,0	1/1:27,0:25:58.81:400,59,0	1/1:27,1:24:26.47:175,26,0	1/1:38,0:37:9.72:144,10,0	1/1:31,1:29:47.84:254,48,0	0/0:39,0:38:89.68:0,90,1492	0/0:36,0:36:99:0,106,1909	0/0:23,0:10:28.34:0,28,523	0/0:39,0:39:63.26:0,63,1722	0/0:135,0:133:99:0,324,5707	1/1:35,0:32:56.86:299,57,0	1/1:28,0:25:18.66:139,19,0	0/1:38,0:36:23.64:83,0,24	1/1:32,0:30:62.10:293,62,0	1/1:30,1:26:56.87:394,57,0	1/1:11,2:11:8.49:140,8,0	1/1:8,0:8:20.35:108,20,0
chr10	24520495	.	T	TACAC	10766.36	PASS	AB=0.677;AC=35;AF=0.625;AN=56;BaseQRankSum=1.369;DP=808;FS=7.283;HRun=0;HaplotypeScore=168.1750;InbreedingCoeff=0.7140;MQ=48.19;MQ0=28;MQRankSum=-4.425;QD=26.92;ReadPosRankSum=2.352;VQSLOD=4.4774;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,19:29:14.33:268,14,0	1/1:2,0:2:3.01:49,3,0	0/0:50,0:16:28.87:0,29,336	0/0:49,0:18:42.10:0,42,606	1/1:10,10:20:30.10:694,30,0	1/1:7,9:16:23.93:537,24,0	0/1:13,8:20:19.65:463,0,20	1/1:48,0:44:80.36:1214,80,0	0/0:38,0:36:89.85:0,90,1511	0/1:14,10:23:13.99:1012,0,14	1/1:6,10:15:21.07:516,21,0	1/1:8,8:16:23.74:543,24,0	1/1:3,12:15:33.09:782,33,0	1/1:11,10:19:18.89:445,19,0	1/1:8,16:24:24.07:629,24,0	1/1:11,18:28:24:574,24,0	0/0:34,0:33:76.23:0,76,1286	0/0:24,0:24:55.96:0,56,1079	0/0:31,0:23:56.96:0,57,933	0/0:38,0:38:99:0,99,1706	0/0:105,0:101:99:0,231,3828	0/0:32,0:32:0.88:0,1,2	1/1:11,11:21:15.04:299,15,0	1/1:10,10:19:12.04:314,12,0	1/1:10,8:18:18.05:387,18,0	1/1:39,0:38:39.32:1342,39,0	1/1:5,8:14:23.63:474,24,0	0/1:2,4:6:10.37:224,0,10
chr10	24520497	.	CACACTCACACACACATATACACAG	C	11971.19	PASS	AB=0.895;AC=36;AF=0.643;AN=56;BaseQRankSum=0.604;DP=795;FS=7.847;HRun=0;HaplotypeScore=356.8357;InbreedingCoeff=0.6357;MQ=48.12;MQ0=30;MQRankSum=-0.799;QD=28.10;ReadPosRankSum=0.724;VQSLOD=1.7999;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:29:13.92:268,14,0	1/1:2,0:2:1.25:75,1,0	0/0:55,0:13:31.38:0,31,381	0/0:49,0:16:43.23:0,43,619	1/1:18,0:18:30.10:714,30,0	1/1:16,0:16:23.69:537,24,0	0/1:21,0:20:15.25:463,0,15	0/1:12,32:40:37.25:1192,0,37	0/0:36,0:34:90.29:0,90,3693	0/1:25,0:24:31.92:1250,0,32	1/1:16,0:15:21.07:516,21,0	1/1:16,0:16:27.98:603,28,0	1/1:15,0:15:32.93:782,33,0	1/1:21,0:19:16.86:441,17,0	1/1:23,0:23:24.44:654,24,0	1/1:27,0:26:24.55:587,25,0	0/0:33,0:33:84.03:0,84,2611	0/0:24,0:24:46.97:0,47,2031	0/0:28,0:21:54.07:0,54,1403	0/0:39,0:39:99:0,108,3925	0/0:104,0:101:99:0,243,9127	1/1:5,27:32:3.27:8,3,0	1/1:22,0:21:16.82:304,17,0	1/1:22,0:21:12.04:314,12,0	1/1:19,0:19:21.06:503,21,0	1/1:4,33:36:45.42:1720,45,0	1/1:14,0:14:24.55:805,25,0	0/1:7,0:7:10.70:235,0,11
chr10	24520500	.	ACT	A	896.95	PASS	AB=0.882;AC=17;AF=0.304;AN=56;BaseQRankSum=8.966;DP=781;FS=3.709;HRun=0;HaplotypeScore=178.3641;InbreedingCoeff=-0.2531;MQ=47.07;MQ0=34;MQRankSum=-3.083;QD=2.68;ReadPosRankSum=-7.788;VQSLOD=0.1624;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:27:42.02:53,0,42	1/1:1,1:2:2.84:14,3,0	0/0:58,0:12:12.68:0,13,304	0/0:50,0:16:45.61:0,46,556	0/1:15,4:19:40.86:41,0,156	0/1:12,4:16:28.14:28,0,107	0/1:15,3:17:99:111,0,106	0/1:42,0:37:72.98:192,0,73	0/0:36,1:35:93.27:0,93,1630	0/1:19,4:22:99:212,0,179	0/0:13,4:17:15.93:0,16,153	0/1:15,2:17:29.60:30,0,111	0/1:14,1:15:4.03:4,0,195	0/0:16,4:20:13.42:0,13,131	0/0:22,1:23:13.42:0,13,199	0/1:25,2:28:48.40:48,0,131	0/0:32,0:32:66.17:0,66,1404	0/0:22,1:23:14.36:0,14,1027	0/0:27,0:21:47.66:0,48,983	0/0:37,0:37:99:0,105,1771	0/0:100,0:97:99:0,203,4138	0/1:27,3:30:0:1,0,0	0/1:16,5:20:38.12:54,0,38	0/0:19,3:21:12:0,12,106	0/1:11,7:18:69.24:69,0,85	0/1:36,2:37:72.90:73,0,252	0/1:12,2:14:68.57:88,0,69	0/1:6,1:7:33.60:34,0,66
chr10	24520517	.	CACAG	C	1839.70	PASS	AB=0.868;AC=19;AF=0.339;AN=56;BaseQRankSum=7.986;DP=764;FS=1.801;HRun=0;HaplotypeScore=201.1008;InbreedingCoeff=-0.3006;MQ=49.03;MQ0=38;MQRankSum=-4.586;QD=5.11;ReadPosRankSum=-3.998;VQSLOD=1.9705;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:22,2:24:38.44:38,0,136	1/1:3,0:3:4.26:93,4,0	0/0:65,0:15:37.37:0,37,662	0/0:54,0:20:45.94:0,46,907	0/1:15,5:20:77.52:78,0,431	0/1:8,5:13:41.66:42,0,283	0/1:17,1:17:92.50:93,0,225	0/1:42,0:35:99:425,0,131	0/0:33,0:33:93.30:0,93,2293	0/1:12,3:14:99:104,0,496	0/1:15,3:17:38.97:39,0,233	0/1:9,4:13:42.01:42,0,256	0/1:16,3:17:99:144,0,364	0/0:14,5:18:11.16:0,11,281	0/1:19,2:21:20.66:21,0,580	0/1:23,6:29:86.98:87,0,341	0/0:36,0:36:90.03:0,90,2138	0/0:26,0:26:42.30:0,42,1473	0/0:27,0:23:65.54:0,66,1434	0/0:32,0:32:93.32:0,93,2380	0/0:90,0:88:99:0,221,5598	1/1:30,0:30:0.22:1,0,0	0/0:12,3:14:6:0,6,148	0/1:19,2:20:44.08:44,0,155	0/1:17,2:19:99:188,0,144	0/1:37,0:37:99:269,0,530	0/1:12,6:18:99:291,0,222	0/0:6,1:7:12.04:0,12,254
chr10	24520519	.	CAG	C	1171.05	PASS	AB=0.900;AC=18;AF=0.321;AN=56;BaseQRankSum=8.718;DP=753;FS=2.353;HRun=0;HaplotypeScore=184.7329;InbreedingCoeff=-0.2681;MQ=49.32;MQ0=35;MQRankSum=-4.761;QD=3.28;ReadPosRankSum=-4.041;VQSLOD=2.1949;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:24,2:26:53.14:53,0,100	1/1:1,2:3:4.24:66,4,0	0/0:62,0:16:29.28:0,29,414	0/0:49,1:20:43.60:0,44,643	0/1:16,4:20:47.03:47,0,306	0/1:13,0:13:7.74:8,0,216	0/1:11,6:16:31.51:32,0,182	0/1:42,0:35:60.66:224,0,61	0/0:33,0:33:93.28:0,93,1633	0/1:14,2:15:99:106,0,329	0/1:13,2:15:1.16:1,0,176	0/1:13,1:14:6.53:7,0,184	0/1:15,4:17:52.07:52,0,292	0/0:14,4:17:11.16:0,11,198	0/1:20,2:22:18.24:18,0,434	0/1:24,3:27:72.62:73,0,261	0/0:39,0:39:99:0,99,1606	0/0:26,0:26:42.79:0,43,1070	0/0:26,0:22:65.53:0,66,1057	0/0:32,0:32:93.30:0,93,1711	0/0:86,1:85:99:0,224,4110	0/1:30,0:30:0:1,0,0	0/0:14,1:14:6.02:0,6,116	0/1:14,5:18:20.33:20,0,126	0/1:17,2:19:91.64:175,0,92	0/1:37,0:37:99:251,0,443	0/1:15,3:18:99:191,0,136	0/0:6,1:7:12.01:0,12,188
chr10	24520591	.	AACACAC	A	7452.02	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=7.272;DP=750;FS=2.615;HRun=0;HaplotypeScore=211.1189;InbreedingCoeff=0.9909;MQ=44.66;MQ0=33;MQRankSum=-7.928;QD=21.41;ReadPosRankSum=-10.486;VQSLOD=1.5151;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:33:53.31:0,53,788	1/1:3,2:5:14.97:164,15,0	0/0:65,0:8:15.82:0,16,159	0/0:59,0:8:14.68:0,15,77	1/1:5,19:24:37.93:258,38,0	1/1:2,13:14:29.52:188,30,0	1/1:12,2:12:26.45:267,26,0	0/0:24,0:33:42.18:0,42,548	0/0:20,0:20:54.15:0,54,1461	1/1:19,6:22:41.85:960,42,0	1/1:6,21:26:52.99:346,53,0	1/1:4,13:17:28.64:315,29,0	1/1:12,6:16:44.84:532,45,0	1/1:10,6:15:32.71:453,33,0	1/1:6,22:26:41.03:361,41,0	1/1:14,9:23:41.24:580,41,0	0/0:37,0:37:82.35:0,82,2040	0/0:25,0:25:59.68:0,60,1393	0/0:31,0:23:63.16:0,63,1672	0/0:21,0:22:57.11:0,57,1461	0/0:66,0:65:99:0,143,3730	1/1:14,8:21:39.36:312,39,0	1/1:11,9:19:29.15:265,29,0	1/1:17,9:25:26.89:316,27,0	1/1:14,6:20:44.84:584,45,0	1/1:12,11:23:31.22:857,31,0	1/1:8,6:14:17.96:254,18,0	1/1:9,2:11:27.02:440,27,0
chr10	24520625	.	C	CT	793.71	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.780;DP=643;FS=1.890;HRun=0;HaplotypeScore=143.0364;InbreedingCoeff=0.9941;MQ=69.16;MQ0=4;MQRankSum=-0.927;QD=29.40;ReadPosRankSum=1.521;VQSLOD=3.3384;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,26:26:57.19:889,57,0	0/0:7,0:7:20.93:0,21,263	0/0:34,0:24:57.01:0,57,748	0/0:29,0:23:41.41:0,41,616	0/0:27,0:27:48.16:0,48,651	0/0:16,0:15:27.09:0,27,356	0/0:13,0:13:33.08:0,33,434	0/0:30,0:30:62.75:0,63,773	0/0:16,0:16:48.15:0,48,651	0/0:30,0:30:77.89:0,78,983	0/0:24,0:24:57.18:0,57,761	0/0:19,0:19:33.11:0,33,447	0/0:20,0:19:56.96:0,57,714	0/0:18,0:18:44.78:0,45,597	0/0:25,0:25:60.05:0,60,754	0/0:19,0:19:54.14:0,54,718	0/0:25,0:25:75.04:0,75,958	0/0:16,0:16:42.07:0,42,557	0/0:29,0:26:72.03:0,72,935	0/0:27,0:27:72.06:0,72,898	0/0:41,0:41:99:0,102,1301	0/0:21,0:21:54.17:0,54,724	0/0:29,0:29:62.98:0,63,804	0/0:19,0:19:41.97:0,42,547	0/0:26,0:26:72.07:0,72,952	0/0:25,0:24:68.51:0,69,851	0/0:17,0:17:48.14:0,48,637	0/0:14,0:14:39.13:0,39,536
chr10	24521900	.	AT	A	1109.44	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.555;DP=544;FS=1.354;HRun=5;HaplotypeScore=52.0419;InbreedingCoeff=0.9371;MQ=81.87;MQ0=0;MQRankSum=-1.641;QD=27.74;ReadPosRankSum=-5.265;VQSLOD=0.8522;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:39.13:0,39,533	0/0:4,0:4:12.04:0,12,164	0/0:17,0:17:31.32:0,31,387	0/0:15,0:15:29.35:0,29,432	0/0:25,0:25:75.25:0,75,1023	0/0:26,0:26:72.23:0,72,969	0/0:14,0:14:36.10:0,36,464	1/1:3,37:40:99:1204,108,0	0/0:14,0:14:42.14:0,42,572	0/0:29,0:29:78.25:0,78,1042	0/0:21,0:21:60.18:0,60,789	0/0:15,0:15:45.15:0,45,615	0/0:22,0:22:66.21:0,66,887	0/0:23,0:23:66.22:0,66,903	0/0:25,0:25:66.21:0,66,890	0/0:22,0:22:60.20:0,60,821	0/0:11,0:11:33.11:0,33,451	0/0:5,0:5:12.04:0,12,164	0/0:19,0:19:57.18:0,57,766	0/0:26,0:26:72.23:0,72,969	0/0:12,0:12:36.05:0,36,451	0/0:8,0:8:21.07:0,21,287	0/0:17,0:17:51.16:0,51,681	0/0:29,0:29:78.21:0,78,1031	0/0:12,0:12:36.11:0,36,466	0/0:29,0:29:87.29:0,87,1189	0/0:31,0:30:90.30:0,90,1223	0/0:19,0:19:57.19:0,57,779
chr10	24524096	.	AG	A	69.34	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.477;DP=540;FS=0.000;HRun=2;HaplotypeScore=61.2553;InbreedingCoeff=0.8820;MQ=55.52;MQ0=21;MQRankSum=-1.972;QD=6.93;ReadPosRankSum=-1.407;VQSLOD=0.1638;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,7:7:12.04:155,12,0	0/0:9,0:9:21.07:0,21,314	0/0:40,0:13:39.09:0,39,526	0/0:41,0:11:20.25:0,20,334	0/0:17,0:16:42.09:0,42,588	0/0:17,0:17:27.09:0,27,404	0/0:15,0:12:21.07:0,21,308	0/0:26,0:6:18.05:0,18,251	0/0:15,0:15:36.07:0,36,505	0/0:23,0:23:66.10:0,66,929	0/0:6,0:4:12.04:0,12,178	0/0:25,0:25:48.09:0,48,716	0/0:16,0:15:29.80:0,30,417	0/0:24,0:22:51.17:0,51,756	0/0:27,0:27:54.16:0,54,768	0/0:22,0:22:54.18:0,54,806	0/0:39,0:39:81.26:0,81,1186	0/0:12,0:12:27.05:0,27,379	0/0:18,0:15:42.07:0,42,563	0/0:15,0:14:30.10:0,30,448	0/0:34,0:33:90.16:0,90,1255	0/0:10,0:10:27.09:0,27,387	0/0:9,0:9:21.07:0,21,305	0/0:14,0:14:21.07:0,21,314	0/0:16,0:16:39.13:0,39,568	0/0:24,0:22:66.22:0,66,988	0/0:12,0:12:36.12:0,36,532	0/0:4,0:4:12.04:0,12,180
chr10	24527055	.	G	GAT	1419.10	PASS	AC=16;AF=0.444;AN=36;BaseQRankSum=7.531;DP=226;FS=66.485;HRun=0;HaplotypeScore=45.9580;InbreedingCoeff=0.7787;MQ=63.51;MQ0=5;MQRankSum=-6.993;QD=33.00;ReadPosRankSum=0.311;VQSLOD=1.1675;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	1/1:0,5:4:12.04:220,12,0	0/0:23,0:20:37.45:0,37,749	0/0:19,0:13:13.64:0,14,439	1/1:0,5:2:6.02:121,6,0	0/0:1,0:1:2.68:0,3,11	./.	./.	0/0:23,0:23:54.18:0,54,880	1/1:0,1:1:3.01:61,3,0	1/1:2,10:10:30.10:559,30,0	./.	./.	./.	./.	./.	0/0:30,0:30:75.26:0,75,1205	0/0:17,0:14:33.09:0,33,504	0/0:14,0:13:39.13:0,39,636	0/0:32,0:32:96.33:0,96,1565	0/0:13,0:12:36.09:0,36,559	1/1:0,4:2:6.02:122,6,0	1/1:1,4:2:6.02:122,6,0	0/0:2,0:2:2.50:0,2,9	1/1:0,8:4:12.04:243,12,0	./.	./.	1/1:1,2:3:6.02:122,6,0
chr10	24530405	.	TA	T	239.93	PASS	AB=0.915;AC=7;AF=0.130;AN=54;BaseQRankSum=4.625;DP=283;FS=20.741;HRun=11;HaplotypeScore=28.1527;InbreedingCoeff=0.4381;MQ=58.91;MQ0=12;MQRankSum=-0.308;QD=4.28;ReadPosRankSum=-0.637;VQSLOD=-0.1916;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,13:14:32.95:271,33,0	0/0:4,0:4:12.01:0,12,119	./.	0/1:12,0:4:6.37:6,0,33	0/0:11,0:10:24.06:0,24,256	0/0:7,0:7:21.05:0,21,223	0/0:11,0:11:27.07:0,27,288	1/1:4,11:8:8.97:74,9,0	0/0:5,0:5:12.03:0,12,128	0/0:11,0:10:24.06:0,24,256	0/0:13,0:13:27.07:0,27,288	0/0:6,0:6:15.04:0,15,160	0/1:7,1:8:6.60:7,0,135	0/0:7,0:6:17.99:0,18,166	0/0:8,0:8:21.04:0,21,218	0/0:11,0:10:27.07:0,27,288	0/0:5,0:5:12.03:0,12,128	0/1:5,1:6:9.61:10,0,110	0/0:13,0:9:17.08:0,17,172	0/0:16,0:15:45.11:0,45,480	0/0:3,0:3:9.02:0,9,96	0/0:12,0:12:36.09:0,36,384	0/0:7,2:9:2.26:0,2,214	0/0:8,0:8:15.02:0,15,151	0/0:11,0:12:32.92:0,33,334	0/0:11,0:11:27.06:0,27,282	0/0:21,0:21:48.07:0,48,493	0/0:11,1:12:8.40:0,8,278
chr10	24533792	.	TTCC	T	444.80	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.233;DP=496;FS=4.518;HRun=0;HaplotypeScore=65.0388;InbreedingCoeff=0.9792;MQ=72.85;MQ0=0;MQRankSum=-3.635;QD=29.65;ReadPosRankSum=-0.663;VQSLOD=3.4026;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,15:15:30.10:539,30,0	0/0:8,0:8:24.08:0,24,592	0/0:8,0:8:24.08:0,24,580	0/0:7,0:7:21.07:0,21,501	0/0:23,0:23:69.24:0,69,1699	0/0:18,0:18:51.18:0,51,1233	0/0:6,0:6:18.06:0,18,444	0/0:33,0:33:99:0,99,2407	0/0:14,0:14:42.14:0,42,1022	0/0:19,0:19:57.20:0,57,1406	0/0:19,0:19:57.20:0,57,1378	0/0:11,0:11:33.11:0,33,789	0/0:18,0:18:54.16:0,54,1255	0/0:13,0:13:36.12:0,36,886	0/0:22,0:22:66.23:0,66,1605	0/0:21,0:21:63.22:0,63,1557	0/0:14,0:14:42.14:0,42,988	0/0:26,0:26:75.26:0,75,1813	0/0:15,0:15:45.15:0,45,1024	0/0:30,0:30:90.31:0,90,2198	0/0:12,0:12:36.11:0,36,816	0/0:15,0:15:45.15:0,45,1088	0/0:27,0:27:81.28:0,81,1997	0/0:7,0:7:21.07:0,21,516	0/0:28,0:28:84.29:0,84,2052	0/0:16,0:16:48.16:0,48,1163	0/0:28,0:28:84.29:0,84,2043	0/0:23,0:23:69.24:0,69,1699
chr10	24535473	.	G	GTT	724.17	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.333;DP=510;FS=1.983;HRun=8;HaplotypeScore=64.0129;InbreedingCoeff=0.9329;MQ=75.89;MQ0=0;MQRankSum=-0.206;QD=31.49;ReadPosRankSum=1.730;VQSLOD=3.7785;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,18:23:54.17:819,54,0	0/0:3,0:3:9.01:0,9,91	0/0:16,0:15:39.09:0,39,429	0/0:11,0:11:22.82:0,23,216	0/0:21,0:21:36.05:0,36,401	0/0:22,0:22:48.08:0,48,524	0/0:11,0:11:30.08:0,30,334	0/0:33,0:33:78.16:0,78,869	0/0:15,0:15:42.10:0,42,468	0/0:24,0:24:69.19:0,69,769	0/0:30,0:30:78.19:0,78,869	0/0:11,0:11:24.06:0,24,267	0/0:16,0:16:48.13:0,48,535	0/0:13,0:13:33.08:0,33,368	0/0:15,0:15:39.09:0,39,435	0/0:9,0:9:27.07:0,27,301	0/0:31,0:31:87.22:0,87,970	0/0:12,0:12:33.08:0,33,368	0/0:27,0:27:57.08:0,57,623	0/0:23,0:23:57.14:0,57,635	0/0:8,0:8:24.06:0,24,268	0/0:22,0:22:63.15:0,63,691	0/0:19,0:19:48.11:0,48,535	0/0:23,0:23:51.07:0,51,559	0/0:22,0:22:60.15:0,60,667	0/0:16,0:17:30:0,30,393	0/0:26,0:26:72.15:0,72,793	0/0:7,0:7:21.06:0,21,234
chr10	24536109	.	TC	T	1121.81	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=8.429;DP=687;FS=1.475;HRun=1;HaplotypeScore=64.5399;InbreedingCoeff=0.9879;MQ=76.20;MQ0=0;MQRankSum=-3.596;QD=36.19;ReadPosRankSum=1.689;VQSLOD=4.0645;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,31:31:87.29:1217,87,0	0/0:13,0:13:39.13:0,39,624	0/0:20,0:20:41.91:0,42,836	0/0:19,0:19:57.18:0,57,856	0/0:33,0:33:99:0,99,1582	0/0:32,0:32:96.30:0,96,1489	0/0:12,0:12:36.12:0,36,576	0/0:32,0:32:96.32:0,96,1515	0/0:23,0:23:69.24:0,69,1098	0/0:34,0:34:99:0,102,1632	0/0:25,0:25:75.26:0,75,1199	0/0:26,0:26:78.25:0,78,1208	0/0:32,0:32:96.31:0,96,1504	0/0:30,0:30:90.29:0,90,1416	0/0:31,0:31:93.32:0,93,1487	0/0:17,0:17:51.17:0,51,815	0/0:20,0:20:57.19:0,57,897	0/0:6,0:6:18.06:0,18,288	0/0:31,0:31:93.29:0,93,1433	0/0:47,0:47:99:0,141,2229	0/0:23,0:23:69.24:0,69,1101	0/0:31,0:31:93.30:0,93,1464	0/0:18,0:18:54.14:0,54,829	0/0:20,0:20:60.20:0,60,954	0/0:20,0:20:60.19:0,60,937	0/0:27,0:27:81.28:0,81,1296	0/0:27,0:27:81.28:0,81,1277	0/0:7,0:7:21.05:0,21,311
chr10	24536504	.	CT	C	9723.45	PASS	AB=0.977;AC=39;AF=0.696;AN=56;BaseQRankSum=3.944;DP=714;FS=5.397;HRun=10;HaplotypeScore=85.7691;InbreedingCoeff=0.9007;MQ=67.63;MQ0=11;MQRankSum=0.223;QD=19.10;ReadPosRankSum=4.429;VQSLOD=5.5246;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,28:30:74:628,74,0	1/1:1,7:8:14.99:130,15,0	0/1:42,0:21:8.88:9,0,207	0/0:39,0:16:5.34:0,5,160	1/1:6,29:35:80.97:702,81,0	1/1:8,24:32:65.95:573,66,0	1/1:1,8:9:23.99:208,24,0	0/0:6,0:33:60.48:0,60,275	0/0:21,0:21:57.14:0,57,616	1/1:4,27:31:41.48:655,41,0	1/1:1,24:25:59.95:520,60,0	1/1:0,24:24:59.99:521,60,0	1/1:1,18:19:47.99:417,48,0	1/1:4,18:22:53.97:469,54,0	1/1:1,22:23:56.99:495,57,0	1/1:1,22:23:26.81:462,27,0	0/0:17,1:18:16.49:0,16,405	0/0:28,1:29:43.10:0,43,675	0/0:28,0:28:53.37:0,53,540	0/0:22,0:23:69.02:0,69,744	0/0:14,0:14:42.11:0,42,465	1/1:1,16:17:47.99:417,48,0	1/1:2,12:14:29.95:255,30,0	1/1:3,21:25:60.97:507,61,0	1/1:3,28:31:74.98:651,75,0	1/1:5,27:33:83:709,83,0	1/1:5,39:44:99:912,105,0	1/1:3,18:21:56.95:486,57,0
chr10	24536720	.	CA	C	6834.94	PASS	AB=0.975;AC=40;AF=0.714;AN=56;BaseQRankSum=6.797;DP=532;FS=4.520;HRun=10;HaplotypeScore=87.4224;InbreedingCoeff=0.8453;MQ=65.38;MQ0=5;MQRankSum=2.752;QD=16.79;ReadPosRankSum=2.127;VQSLOD=5.4099;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,1:21:9.31:0,9,201	1/1:0,7:7:18:156,18,0	0/1:31,0:13:8.12:8,0,81	0/1:35,1:14:5.24:5,0,56	1/1:2,23:25:68.97:596,69,0	1/1:2,21:23:53.86:457,54,0	1/1:2,11:13:35.99:311,36,0	1/1:5,0:31:54.56:159,55,0	0/0:16,1:17:24.31:0,24,380	1/1:3,20:23:44.29:495,44,0	1/1:3,14:16:41.99:364,42,0	1/1:2,10:12:32.99:284,33,0	1/1:3,13:16:35.99:312,36,0	1/1:4,15:19:45.46:391,45,0	1/1:3,14:17:41.99:365,42,0	1/1:4,13:17:39.46:340,39,0	0/0:25,0:28:63:0,63,677	0/0:18,0:18:42.08:0,42,452	0/0:16,0:15:29.57:0,30,307	0/0:15,0:15:33.09:0,33,365	0/0:10,0:10:24.05:0,24,257	1/1:3,6:9:17.99:156,18,0	1/1:0,16:16:44.99:390,45,0	1/1:1,8:9:23.92:198,24,0	1/1:1,17:18:50.99:442,51,0	1/1:2,19:21:56.98:494,57,0	1/1:4,20:24:59.98:519,60,0	1/1:3,16:19:44.98:390,45,0
chr10	24537130	.	A	AGT	744.62	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-6.434;DP=545;FS=2.970;HRun=0;HaplotypeScore=98.2615;InbreedingCoeff=0.9590;MQ=87.18;MQ0=0;MQRankSum=0.202;QD=31.03;ReadPosRankSum=-4.311;VQSLOD=4.2673;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:48.14:0,48,638	0/0:8,0:8:18.47:0,18,66	0/0:20,0:20:48.01:0,48,622	0/0:19,0:20:38.06:0,38,472	0/0:18,0:18:32.59:0,33,131	0/0:24,0:24:51.84:0,52,183	0/0:20,0:20:43.57:0,44,189	1/1:3,21:24:54.10:839,54,0	0/0:20,0:20:57.18:0,57,766	0/0:24,0:24:46.69:0,47,197	0/0:25,0:25:44.31:0,44,210	0/0:14,0:14:31.20:0,31,151	0/0:22,0:22:42.65:0,43,168	0/0:18,0:18:14.98:0,15,83	0/0:32,0:32:68.92:0,69,267	0/0:17,0:17:28.57:0,29,143	0/0:14,0:14:42.06:0,42,506	0/0:10,0:10:27.07:0,27,339	0/0:21,0:21:60.10:0,60,741	0/0:14,0:14:38.97:0,39,473	0/0:19,0:19:45.08:0,45,549	0/0:13,0:13:23.75:0,24,107	0/0:27,0:27:53.24:0,53,283	0/0:15,0:15:33.43:0,33,172	0/0:25,0:25:46.08:0,46,231	0/0:19,0:19:35.25:0,35,166	0/0:38,0:38:70.21:0,70,287	0/0:7,0:7:15.54:0,16,50
chr10	24537134	.	T	TG	9509.04	PASS	AB=1.000;AC=37;AF=0.661;AN=56;BaseQRankSum=-9.884;DP=556;FS=1.201;HRun=8;HaplotypeScore=57.0108;InbreedingCoeff=0.9110;MQ=91.30;MQ0=0;MQRankSum=-3.002;QD=24.20;ReadPosRankSum=3.611;VQSLOD=5.5429;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:54.01:0,54,488	1/1:1,7:8:21.06:242,21,0	0/0:25,0:25:58.66:0,59,498	0/0:22,0:22:35.68:0,36,294	1/1:2,16:18:39.07:434,39,0	1/1:1,23:24:66.20:762,66,0	1/1:2,21:23:26.70:561,27,0	0/1:25,0:25:12.63:88,0,13	0/0:21,0:21:60.01:0,60,544	1/1:4,17:21:51.15:587,51,0	1/1:7,15:22:24.87:554,25,0	1/1:3,11:14:30.09:346,30,0	1/1:1,20:21:32.71:630,33,0	1/1:0,17:18:47.97:534,48,0	1/1:3,30:33:81.24:935,81,0	1/1:5,15:20:17.53:437,18,0	0/0:14,0:14:30:0,30,275	0/0:10,0:10:23.96:0,24,211	0/0:22,0:22:54:0,54,488	0/0:14,0:14:36.01:0,36,329	0/0:16,0:17:35.04:0,35,307	1/1:3,9:12:24.07:277,24,0	1/1:6,19:25:26.69:561,27,0	1/1:3,14:17:8.64:353,9,0	1/1:7,17:24:42.12:485,42,0	1/1:5,15:20:39.10:441,39,0	1/1:2,39:41:47.20:1039,47,0	1/1:0,7:7:21.06:242,21,0
chr10	24541334	.	T	TGG	26855.64	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-1.545;DP=667;FS=3.256;HRun=0;HaplotypeScore=86.8272;InbreedingCoeff=0.9992;MQ=90.72;MQ0=0;MQRankSum=-4.508;QD=55.26;ReadPosRankSum=4.162;VQSLOD=5.5640;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,39:42:99:2253,111,0	1/1:0,7:8:21.07:427,21,0	0/0:25,0:25:71.45:0,71,1140	0/0:27,0:27:78.23:0,78,1206	1/1:1,23:25:63.22:1280,63,0	1/1:0,21:22:54.19:1097,54,0	1/1:1,18:20:57.20:1158,57,0	1/1:1,31:33:99:1977,99,0	0/0:14,0:14:36.12:0,36,587	1/1:0,22:22:66.23:1341,66,0	1/1:0,17:17:51.18:1036,51,0	1/1:0,26:27:75.26:1522,75,0	1/1:1,30:33:84.29:1707,84,0	1/1:1,17:18:54.19:1093,54,0	1/1:1,25:26:69.24:1402,69,0	1/1:0,16:16:48.16:976,48,0	0/0:33,0:33:96.26:0,96,1490	0/0:11,0:11:33.11:0,33,538	0/0:19,0:19:57.19:0,57,907	0/0:23,0:23:69.22:0,69,1100	0/0:29,0:29:78.27:0,78,1273	1/1:1,23:24:69.24:1402,69,0	1/1:0,14:15:42.14:853,42,0	1/1:1,23:24:66.23:1334,66,0	1/1:1,26:27:72.25:1463,72,0	1/1:1,36:38:99:2161,108,0	1/1:1,23:25:66.23:1341,66,0	1/1:1,19:24:51.18:1036,51,0
chr10	24542493	.	GTA	G	7380.78	PASS	AB=0.667;AC=37;AF=0.661;AN=56;BaseQRankSum=9.447;DP=362;FS=1.674;HRun=0;HaplotypeScore=43.6623;InbreedingCoeff=0.8213;MQ=64.06;MQ0=3;MQRankSum=0.311;QD=26.74;ReadPosRankSum=1.570;VQSLOD=5.4647;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:36.12:0,36,591	1/1:2,9:11:21.07:267,21,0	0/0:3,0:1:2.94:0,3,18	0/0:6,0:3:2.03:0,2,4	1/1:0,17:17:45.06:536,45,0	1/1:4,15:19:30.10:382,30,0	1/1:1,5:6:12.04:153,12,0	1/1:12,20:32:12.95:685,13,0	0/0:9,0:9:27.08:0,27,420	1/1:3,23:26:69.20:861,69,0	1/1:4,24:28:54.13:687,54,0	1/1:0,8:8:18.06:229,18,0	1/1:2,14:14:30.10:382,30,0	1/1:3,12:15:27.09:344,27,0	1/1:3,7:10:18.06:229,18,0	1/1:0,21:21:51.16:648,51,0	0/0:13,0:13:36.05:0,36,519	0/0:12,0:12:36.12:0,36,588	0/0:15,1:15:30.10:0,30,498	0/0:9,0:9:21.07:0,21,351	0/0:5,0:5:15.04:0,15,226	1/1:0,3:3:6.02:76,6,0	1/1:0,5:5:12.03:153,12,0	0/1:2,2:4:32.16:32,0,36	1/1:1,12:13:33.11:420,33,0	1/1:1,15:16:45.14:572,45,0	1/1:3,18:21:48.15:611,48,0	1/1:0,5:5:9.03:114,9,0
chr10	24543988	.	AAGG	A	991.01	PASS	AB=0.993;AC=41;AF=0.788;AN=52;BaseQRankSum=-0.582;DP=637;FS=4.010;HRun=0;HaplotypeScore=95.5539;InbreedingCoeff=-0.2353;MQ=25.76;MQ0=210;MQRankSum=0.076;QD=1.63;ReadPosRankSum=1.161;VQSLOD=1.3554;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:18,0:10:23.95:26,0,24	1/1:10,1:8:1.88:16,2,0	./.	./.	1/1:15,0:12:1.63:13,2,0	1/1:20,0:9:2.41:18,2,0	1/1:24,0:12:3.28:22,3,0	1/1:22,0:8:2.61:22,3,0	0/1:24,0:17:11.39:11,0,132	1/1:36,0:26:15.36:119,15,0	1/1:25,0:16:6.27:39,6,0	1/1:27,0:15:8.66:32,9,0	1/1:33,1:22:7.73:48,8,0	1/1:27,0:18:16.13:103,16,0	1/1:19,0:17:3.21:30,3,0	1/1:17,0:15:10.27:73,10,0	0/1:28,0:12:23.94:24,0,56	0/1:33,0:21:19.90:91,0,20	0/1:25,0:15:30.11:30,0,54	0/1:21,0:17:10.52:11,0,41	0/1:26,1:16:29.58:30,0,87	1/1:27,1:15:4.61:62,5,0	1/1:30,0:18:2.92:17,3,0	0/0:30,0:12:0.20:0,0,6	1/1:19,0:14:3.92:53,4,0	0/1:40,1:27:14.84:124,0,15	1/1:25,0:14:7.10:54,7,0	0/1:11,0:9:2.50:54,0,2
chr10	24544129	.	AGGAGAGGGAGAG	A	6438.57	PASS	AB=1.000;AC=32;AF=0.696;AN=46;BaseQRankSum=0.839;DP=544;FS=12.991;HRun=0;HaplotypeScore=147.7439;InbreedingCoeff=0.7233;MQ=45.12;MQ0=61;MQRankSum=0.522;QD=21.46;ReadPosRankSum=2.580;VQSLOD=3.1817;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	1/1:6,0:4:9.02:113,9,0	./.	0/0:51,0:14:6:0,6,95	1/1:9,9:17:11.84:90,12,0	1/1:16,0:13:26.99:314,27,0	1/1:35,0:29:39.12:512,39,0	./.	0/0:10,0:6:12.04:0,12,197	1/1:7,24:30:66.15:984,66,0	1/1:1,5:6:3.01:36,3,0	1/1:17,0:16:26.97:325,27,0	1/1:15,0:13:30.09:371,30,0	1/1:20,0:19:41.93:515,42,0	1/1:18,0:15:32.99:417,33,0	1/1:18,0:18:51.08:655,51,0	0/0:23,0:16:18.06:0,18,256	0/0:25,0:23:42.14:0,42,632	0/0:19,0:13:24.04:0,24,380	0/1:10,0:9:13.98:14,0,32	0/0:38,0:35:39.07:0,39,521	./.	./.	1/1:40,0:38:60.14:831,60,0	1/1:5,0:5:12.04:201,12,0	1/1:21,0:21:38.30:529,38,0	1/1:15,0:14:30.08:408,30,0	0/1:9,0:8:9.95:124,0,10
chr10	24544478	.	T	TG	9777.61	PASS	AB=0.894;AC=54;AF=0.964;AN=56;BaseQRankSum=1.558;DP=585;FS=0.000;HRun=1;HaplotypeScore=98.3602;InbreedingCoeff=-0.0349;MQ=70.84;MQ0=0;MQRankSum=-2.629;QD=16.71;ReadPosRankSum=5.764;VQSLOD=5.0388;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:20:50.50:356,51,0	1/1:11,0:11:32.42:210,32,0	0/1:15,2:16:25.23:162,0,25	0/1:14,2:15:7.31:158,0,7	1/1:17,0:17:47.25:311,47,0	1/1:32,0:32:85.72:561,86,0	1/1:21,0:21:59.29:410,59,0	1/1:36,0:36:76.02:547,76,0	1/1:23,0:23:59.09:383,59,0	1/1:25,0:25:69.98:416,70,0	1/1:21,0:21:41.78:340,42,0	1/1:16,0:16:41.37:287,41,0	1/1:19,0:19:53.23:357,53,0	1/1:20,0:20:25.35:274,25,0	1/1:34,0:34:94.23:602,94,0	1/1:18,0:18:50.32:345,50,0	1/1:29,0:29:71.20:497,71,0	1/1:16,0:17:47.54:339,48,0	1/1:22,0:22:30.88:299,31,0	1/1:25,0:25:25.14:368,25,0	1/1:10,0:10:29.53:189,30,0	1/1:18,0:18:50.14:330,50,0	1/1:17,0:17:13.74:229,14,0	1/1:13,0:13:32.55:218,33,0	1/1:20,0:20:55.90:353,56,0	1/1:28,0:28:82.14:497,82,0	1/1:15,0:15:38.46:268,38,0	1/1:24,0:24:70.99:474,71,0
chr10	24544892	.	C	CA	770.60	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-4.988;DP=647;FS=0.000;HRun=9;HaplotypeScore=118.3281;InbreedingCoeff=0.6645;MQ=63.31;MQ0=2;MQRankSum=1.563;QD=23.35;ReadPosRankSum=-4.616;VQSLOD=1.2005;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:26:17.08:0,17,95	0/0:10,0:10:26.99:0,27,233	0/0:26,0:22:34.26:0,34,290	0/0:19,0:12:25.89:0,26,196	0/0:32,0:32:86.97:0,87,754	0/0:19,0:19:53.99:0,54,467	0/0:27,2:29:2.62:0,3,475	1/1:6,27:33:79.46:865,79,0	0/0:18,0:18:16.29:0,16,48	0/0:29,0:29:74.98:0,75,651	0/0:34,0:34:88.47:0,88,773	0/0:17,0:17:44.99:0,45,391	0/0:29,0:29:83.97:0,84,728	0/0:27,0:27:65.98:0,66,573	0/0:27,0:27:59.97:0,60,521	0/0:20,0:20:53.95:0,54,460	0/0:13,0:14:8.95:0,9,31	0/0:10,0:11:8.15:0,8,24	0/0:19,0:19:34.63:0,35,101	0/0:25,0:25:42.55:0,43,124	0/0:14,0:14:4.07:0,4,12	0/0:18,0:18:41.82:0,42,364	0/0:33,0:33:53.78:0,54,692	0/0:17,0:17:35.98:0,36,311	0/0:28,0:28:71.95:0,72,623	0/0:27,0:27:74.94:0,75,645	0/0:29,0:30:77:0,77,657	0/0:15,1:16:11.80:0,12,329
chr10	24544896	.	AAAAAAC	A	2928.24	PASS	AB=0.572;AC=12;AF=0.214;AN=56;BaseQRankSum=-5.088;DP=648;FS=5.108;HRun=0;HaplotypeScore=168.7692;InbreedingCoeff=0.7595;MQ=63.40;MQ0=2;MQRankSum=-5.678;QD=23.24;ReadPosRankSum=-0.716;VQSLOD=2.8723;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:6,0:26:26.70:200,0,27	0/0:9,0:9:27.09:0,27,783	0/0:25,0:20:39.10:0,39,604	0/0:20,0:13:32.46:0,32,480	0/0:33,0:33:99:0,99,2772	0/0:18,0:18:54.18:0,54,1767	0/0:24,0:24:68.90:0,69,1803	0/0:33,0:33:85.56:0,86,1175	1/1:1,15:16:30.10:628,30,0	0/0:32,0:32:87.29:0,87,2258	0/0:37,0:37:99:0,103,2775	0/0:19,0:19:54.18:0,54,1572	0/0:30,0:30:90.30:0,90,2357	0/0:26,0:26:69.23:0,69,1840	0/0:23,0:23:66.22:0,66,2085	0/0:18,0:18:54.18:0,54,1579	0/1:3,8:11:41.68:124,0,42	1/1:1,12:13:14.53:217,15,0	1/1:2,18:20:54.09:790,54,0	1/1:0,26:26:75.04:1073,75,0	1/1:3,11:14:6.01:73,6,0	0/0:18,0:18:43.38:0,43,1086	0/0:33,0:33:93.31:0,93,2552	0/0:17,0:17:42.14:0,42,1104	0/0:29,0:29:87.28:0,87,2371	0/0:30,0:30:87.29:0,87,2396	0/0:31,0:31:90.30:0,90,2465	0/0:17,0:17:51.17:0,51,1588
chr10	24546900	.	TAAC	T	1962.41	PASS	AB=1.000;AC=27;AF=0.482;AN=56;BaseQRankSum=-2.865;DP=246;FS=0.000;HRun=0;HaplotypeScore=51.7160;InbreedingCoeff=0.0526;MQ=68.68;MQ0=2;MQRankSum=4.309;QD=11.09;ReadPosRankSum=1.287;VQSLOD=2.7837;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,11:12:18.06:289,18,0	0/1:9,0:9:43.63:44,0,78	0/0:7,0:7:14.95:0,15,132	0/0:12,0:11:13.32:0,13,210	1/1:7,0:7:14.85:109,15,0	0/0:11,0:11:23.70:0,24,176	0/1:6,0:6:7.33:83,0,7	1/1:3,33:36:95.88:933,96,0	0/0:6,0:6:0.70:0,1,107	0/1:4,0:4:26.13:34,0,26	1/1:4,0:4:8.98:73,9,0	0/0:7,0:7:8.93:0,9,63	1/1:6,0:6:14.38:116,14,0	0/1:7,0:7:10.50:33,0,10	0/1:9,0:9:16.02:16,0,34	0/0:2,0:2:2.98:0,3,21	0/1:18,0:18:59.45:59,0,68	0/1:7,0:7:26.33:51,0,26	0/1:8,0:7:36.71:37,0,37	0/0:10,0:10:1.70:0,2,109	0/0:2,0:2:5.99:0,6,50	1/1:3,0:3:5.99:50,6,0	1/1:4,0:4:8.67:61,9,0	1/1:2,0:2:2.99:24,3,0	0/1:9,0:9:17.03:17,0,32	0/1:6,0:6:48.29:62,0,48	0/0:12,0:12:8.92:0,9,64	0/1:20,0:19:47.42:47,0,199
chr10	24546903	.	C	CAATAAT	2958.09	PASS	AB=0.558;AC=34;AF=0.630;AN=54;BaseQRankSum=-0.799;DP=240;FS=12.398;HRun=0;HaplotypeScore=58.3696;InbreedingCoeff=0.5650;MQ=69.34;MQ0=2;MQRankSum=-4.347;QD=18.49;ReadPosRankSum=-1.901;VQSLOD=0.5915;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:18.06:0,18,226	1/1:5,3:8:16.27:345,16,0	0/0:7,0:7:14.73:0,15,120	0/0:12,0:11:26.92:0,27,360	1/1:5,0:5:3.45:25,3,0	1/1:1,9:12:21.07:679,21,0	1/1:4,1:5:8.98:146,9,0	1/1:35,0:35:29.60:288,30,0	0/0:6,0:6:18.03:0,18,265	1/1:1,3:4:6.49:146,6,0	1/1:3,0:3:5.97:48,6,0	1/1:0,7:7:9.03:291,9,0	1/1:7,0:7:9.86:86,10,0	1/1:5,0:5:5.41:43,5,0	1/1:2,5:9:6.01:195,6,0	1/1:1,2:4:3.01:97,3,0	0/0:16,0:16:30.06:0,30,546	0/0:8,0:8:1.15:0,1,247	0/0:9,0:8:18.06:0,18,352	0/0:7,0:7:17.23:0,17,265	0/0:2,0:2:6.01:0,6,75	1/1:2,0:2:2.99:25,3,0	1/1:3,0:3:2.97:24,3,0	./.	1/1:2,6:8:3:97,3,0	1/1:6,0:6:5.45:92,5,0	0/1:1,13:16:11.56:280,0,12	0/1:7,0:20:22.41:235,0,22
chr10	24546906	.	CAAT	C	761.79	PASS	AB=1.000;AC=13;AF=0.310;AN=42;BaseQRankSum=-5.803;DP=220;FS=6.160;HRun=0;HaplotypeScore=51.8158;InbreedingCoeff=0.6088;MQ=68.33;MQ0=2;MQRankSum=5.480;QD=8.86;ReadPosRankSum=1.753;VQSLOD=1.7974;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:12,0:12:3.03:125,0,3	0/0:8,0:8:15.05:0,15,190	./.	./.	./.	0/0:12,0:12:27.07:0,27,343	0/0:5,0:5:3.01:0,3,39	1/1:33,0:33:20.69:142,21,0	1/1:5,1:6:3.01:41,3,0	0/0:4,0:4:6.02:0,6,85	./.	0/0:6,0:6:9.03:0,9,117	0/0:7,0:7:5.93:0,6,41	0/0:4,0:4:6.01:0,6,62	0/0:7,0:7:6.02:0,6,78	0/0:3,0:3:3.01:0,3,39	1/1:4,10:14:18.03:227,18,0	1/1:2,5:7:12.04:158,12,0	1/1:3,5:7:14.72:175,15,0	1/1:5,1:6:3.01:41,3,0	./.	./.	0/0:3,0:3:2.74:0,3,12	./.	0/0:8,0:8:6.02:0,6,76	0/0:6,0:6:9.03:0,9,131	0/0:11,0:11:12.04:0,12,160	0/0:21,0:20:33.11:0,33,468
chr10	24555691	.	TC	T	68.67	PASS	AC=8;AF=0.333;AN=24;BaseQRankSum=-1.280;DP=156;FS=7.627;HRun=1;HaplotypeScore=25.0753;InbreedingCoeff=0.7427;MQ=91.79;MQ0=4;MQRankSum=-0.411;QD=9.81;ReadPosRankSum=-3.698;VQSLOD=-0.5991;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,2:2:3.01:41,3,0	./.	0/0:17,1:15:43.39:0,43,653	0/0:21,0:16:48.16:0,48,746	./.	./.	./.	1/1:1,0:1:3:26,3,0	0/0:16,0:15:45.15:0,45,716	./.	./.	./.	./.	./.	./.	./.	0/0:11,0:11:33.11:0,33,525	0/0:17,0:17:51.17:0,51,814	0/0:22,0:21:63.21:0,63,999	0/0:5,0:4:12.04:0,12,190	0/0:30,0:30:90.31:0,90,1435	./.	./.	./.	./.	1/1:2,1:2:6:65,6,0	./.	1/1:1,0:1:3.01:41,3,0
chr10	24556731	.	AACACACACACACAC	A	9172.61	PASS	AB=1.000;AC=35;AF=0.673;AN=52;BaseQRankSum=3.133;DP=368;FS=22.710;HRun=0;HaplotypeScore=146.3599;InbreedingCoeff=0.7410;MQ=61.40;MQ0=7;MQRankSum=-7.468;QD=44.74;ReadPosRankSum=1.159;VQSLOD=2.8773;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:29:15.05:489,15,0	./.	0/0:31,0:15:11.78:0,12,217	0/0:27,0:18:21.07:0,21,665	1/1:1,11:12:27.09:1047,27,0	1/1:2,2:3:3.01:119,3,0	1/1:6,5:11:3.01:119,3,0	0/1:18,0:17:99:147,0,272	0/0:10,0:19:36.11:0,36,1436	1/1:2,4:6:12.04:454,12,0	1/1:8,4:13:24.05:656,24,0	1/1:4,6:9:12.04:425,12,0	1/1:4,4:8:9.03:311,9,0	1/1:3,3:7:12.04:456,12,0	1/1:7,12:20:25.52:1045,26,0	1/1:3,7:11:18.06:694,18,0	0/0:10,0:19:24.08:0,24,1000	0/0:5,0:12:15.05:0,15,635	0/0:5,0:5:3.01:0,3,118	0/0:7,0:16:27.09:0,27,1134	0/0:20,0:22:30.10:0,30,1165	1/1:7,2:9:6.02:239,6,0	1/1:5,5:10:12.92:479,13,0	./.	1/1:1,9:10:18.02:617,18,0	1/1:6,3:7:18.03:489,18,0	1/1:6,9:17:33.11:1269,33,0	1/1:0,1:1:3.01:119,3,0
chr10	24556751	.	CACACACACACACACA	C	6250.97	PASS	AB=1.000;AC=24;AF=0.429;AN=56;BaseQRankSum=10.395;DP=368;FS=8.860;HRun=0;HaplotypeScore=154.3169;InbreedingCoeff=-0.0710;MQ=50.59;MQ0=12;MQRankSum=-8.768;QD=29.35;ReadPosRankSum=7.269;VQSLOD=2.6992;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:11,9:18:15.05:675,15,0	1/1:2,0:2:6.02:67,6,0	0/0:31,0:10:27.09:0,27,783	0/0:24,0:12:33.08:0,33,1041	0/1:18,0:18:99:667,0,157	0/1:4,0:3:39:69,0,39	0/1:9,0:9:64.16:64,0,110	0/1:24,0:22:63.97:64,0,595	0/0:23,0:23:57.18:0,57,2486	1/1:5,0:5:12.04:281,12,0	0/1:15,0:15:99:395,0,133	0/1:9,0:8:28.04:237,0,28	0/1:10,0:9:37.74:166,0,38	1/1:5,0:5:12.04:320,12,0	0/1:19,0:19:10.75:692,0,11	0/1:12,0:10:19.12:487,0,19	0/0:17,0:17:30.10:0,30,1426	0/0:12,0:11:27.09:0,27,1137	0/0:5,0:3:9.03:0,9,220	0/0:16,0:16:47.97:0,48,1825	0/0:18,0:18:45.15:0,45,1864	0/1:11,0:11:26.40:153,0,26	0/1:10,0:10:25.08:345,0,25	0/0:9,0:9:2.97:0,3,20	0/1:12,0:12:98.82:354,0,99	1/1:9,0:7:18:317,18,0	0/1:16,0:16:43.13:830,0,43	0/1:3,0:3:67.12:67,0,73
chr10	24556819	.	CT	C	3012.87	PASS	AB=0.969;AC=38;AF=0.679;AN=56;BaseQRankSum=6.745;DP=302;FS=38.367;HRun=11;HaplotypeScore=55.5503;InbreedingCoeff=0.7459;MQ=55.85;MQ0=29;MQRankSum=-3.629;QD=14.77;ReadPosRankSum=3.215;VQSLOD=1.5794;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:6:8.64:0,9,47	1/1:1,4:5:11.98:98,12,0	0/1:14,1:5:8.82:25,0,9	0/1:14,0:6:5.13:5,0,42	1/1:5,15:20:39.41:321,39,0	1/1:1,5:6:14.98:123,15,0	1/1:3,2:5:5.98:49,6,0	0/0:26,0:16:30.06:0,30,312	0/0:11,0:10:15.02:0,15,152	1/1:4,11:14:35.91:292,36,0	1/1:1,4:5:11.98:97,12,0	1/1:2,5:6:11.98:98,12,0	1/1:1,5:6:14.98:123,15,0	1/1:0,4:4:11.99:98,12,0	1/1:2,5:7:14.98:123,15,0	1/1:1,10:10:26.97:222,27,0	0/0:14,0:9:6.02:0,6,64	0/0:11,0:9:21:0,21,202	0/0:12,0:10:27.06:0,27,282	0/0:11,0:11:21.05:0,21,223	0/0:2,0:2:2.99:0,3,23	1/1:4,11:17:34.90:277,35,0	1/1:2,9:12:29:227,29,0	1/1:1,6:6:14.98:123,15,0	1/1:3,13:16:38.95:320,39,0	1/1:1,13:13:38.95:318,39,0	1/1:5,9:14:26.96:222,27,0	1/1:1,2:3:5.99:49,6,0
chr10	24556840	.	AT	A	2786.83	PASS	AB=1.000;AC=37;AF=0.685;AN=54;BaseQRankSum=5.804;DP=276;FS=18.973;HRun=10;HaplotypeScore=44.7824;InbreedingCoeff=0.7591;MQ=56.40;MQ0=30;MQRankSum=-4.750;QD=16.20;ReadPosRankSum=3.937;VQSLOD=2.3748;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:6:9.02:0,9,99	1/1:0,4:4:12:104,12,0	0/0:16,0:5:11.98:0,12,111	0/1:13,0:7:8.51:9,0,43	1/1:4,11:15:23.98:208,24,0	1/1:1,4:5:9:78,9,0	1/1:1,2:3:6:52,6,0	0/0:22,1:15:7.02:0,7,295	0/0:9,1:10:11.87:0,12,114	1/1:5,9:13:26.97:234,27,0	1/1:1,4:5:12:104,12,0	1/1:0,7:6:18:156,18,0	1/1:3,4:7:8.98:78,9,0	1/1:1,5:6:14.99:130,15,0	1/1:1,7:8:18:156,18,0	1/1:1,7:8:20.99:182,21,0	0/0:12,0:7:9.02:0,9,100	0/0:10,0:8:15.04:0,15,166	0/0:9,0:7:18.05:0,18,198	0/0:10,1:11:1.02:0,1,237	./.	1/1:5,11:16:26.90:234,27,0	1/1:2,9:11:26.99:234,27,0	1/1:2,4:5:8.99:78,9,0	1/1:1,12:13:35.99:312,36,0	1/1:2,14:14:38.99:338,39,0	1/1:3,9:12:26.97:234,27,0	1/1:1,2:2:6:52,6,0
chr10	24560014	.	TAAAAA	T	12553.44	PASS	AB=0.553;AC=37;AF=0.661;AN=56;BaseQRankSum=3.129;DP=542;FS=3.339;HRun=15;HaplotypeScore=135.4765;InbreedingCoeff=0.9146;MQ=55.87;MQ0=3;MQRankSum=-4.622;QD=34.11;ReadPosRankSum=9.464;VQSLOD=2.6000;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:5,1:26:19.97:20,0,201	1/1:1,6:8:18:271,18,0	0/0:18,0:15:20.43:0,20,378	0/0:17,0:11:24.07:0,24,430	1/1:6,25:33:72.07:1118,72,0	1/1:2,14:16:42.13:676,42,0	1/1:3,10:13:30.03:483,30,0	0/0:17,0:40:87.18:0,87,1080	0/0:9,0:12:24.08:0,24,587	1/1:4,24:28:66.49:1106,66,0	1/1:6,19:25:60.13:965,60,0	1/1:8,10:18:35.95:552,36,0	1/1:2,11:13:30.05:483,30,0	1/1:5,12:17:36.02:577,36,0	1/1:7,15:23:57.12:875,57,0	1/1:1,7:8:21.06:338,21,0	0/0:16,0:17:33.11:0,33,857	0/0:15,0:15:27.08:0,27,630	0/0:18,0:18:54.19:0,54,1407	0/0:25,0:25:72.25:0,72,1880	0/0:10,0:10:21.96:0,22,547	1/1:3,12:17:45.13:687,45,0	1/1:3,16:20:51.04:802,51,0	1/1:3,12:15:33.09:529,33,0	1/1:3,22:26:51.14:802,51,0	1/1:6,9:16:36.05:559,36,0	1/1:6,31:37:93.18:1471,93,0	1/1:4,5:9:14.96:241,15,0
chr10	24560899	.	TAA	T	7795.26	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=5.854;DP=351;FS=0.470;HRun=9;HaplotypeScore=48.0190;InbreedingCoeff=0.9580;MQ=71.78;MQ0=0;MQRankSum=1.614;QD=29.98;ReadPosRankSum=-1.011;VQSLOD=4.2961;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,15:16:42.12:489,42,0	1/1:0,8:8:24.07:280,24,0	0/0:6,0:6:15.05:0,15,229	0/0:9,0:9:6.63:0,7,189	1/1:4,18:22:54.15:629,54,0	1/1:0,7:7:18.05:210,18,0	1/1:0,4:4:12.04:140,12,0	1/1:1,22:24:66.12:733,66,0	0/0:9,0:9:27.09:0,27,440	1/1:2,22:24:66.19:769,66,0	1/1:2,20:22:57.16:664,57,0	1/1:1,6:7:15.04:175,15,0	1/1:1,12:13:30.09:350,30,0	1/1:1,7:8:18.05:210,18,0	1/1:1,6:7:15.04:175,15,0	1/1:0,13:13:33.10:385,33,0	0/0:16,0:16:48.16:0,48,788	0/0:26,0:26:69.24:0,69,1132	0/0:10,0:10:30.10:0,30,469	0/0:11,0:11:30.10:0,30,492	0/0:4,0:4:12.04:0,12,197	1/1:2,8:10:24.06:280,24,0	1/1:1,14:15:30.06:350,30,0	1/1:1,5:6:15.04:175,15,0	1/1:1,6:7:18.05:210,18,0	1/1:1,20:21:60.18:699,60,0	1/1:1,14:15:42.12:489,42,0	1/1:0,11:11:33.10:385,33,0
chr10	24560998	.	C	CA	7081.70	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-10.844;DP=392;FS=10.115;HRun=8;HaplotypeScore=39.3060;InbreedingCoeff=0.9825;MQ=62.59;MQ0=1;MQRankSum=-0.608;QD=29.51;ReadPosRankSum=3.117;VQSLOD=4.3191;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:36.01:0,36,328	1/1:0,6:6:12.04:138,12,0	0/0:17,0:13:29.96:0,30,258	0/0:16,0:12:26.86:0,27,219	1/1:0,27:28:81.03:897,81,0	1/1:2,15:17:11.65:388,12,0	1/1:1,6:7:18.05:208,18,0	0/0:29,0:29:42.88:0,43,573	0/0:12,0:12:30.01:0,30,274	1/1:2,12:14:39.11:447,39,0	1/1:4,12:16:36.11:416,36,0	1/1:0,5:5:15.04:173,15,0	1/1:0,9:9:27.08:312,27,0	1/1:1,8:9:27.08:309,27,0	1/1:1,14:15:42.12:485,42,0	1/1:3,9:12:30.09:346,30,0	0/0:17,0:17:45.01:0,45,411	0/0:18,0:18:39.89:0,40,359	0/0:12,0:12:24:0,24,219	0/0:10,0:10:30.02:0,30,275	0/0:6,0:6:15:0,15,137	1/1:1,7:9:26.87:276,27,0	1/1:4,8:12:24.07:277,24,0	1/1:0,9:9:24.07:277,24,0	1/1:2,16:18:39.12:450,39,0	1/1:1,16:17:48.14:554,48,0	1/1:1,27:28:72.21:831,72,0	1/1:0,9:9:27.05:298,27,0
chr10	24564792	.	A	ATGTGTGTG	4444.18	PASS	AB=0.907;AC=36;AF=0.692;AN=52;BaseQRankSum=-1.516;DP=488;FS=2.759;HRun=0;HaplotypeScore=157.2176;InbreedingCoeff=0.3232;MQ=62.00;MQ0=9;MQRankSum=-1.650;QD=11.66;ReadPosRankSum=-0.329;VQSLOD=3.8263;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:27:20.55:259,21,0	./.	./.	0/1:19,0:13:0:0,0,0	1/1:33,0:32:14.96:310,15,0	1/1:24,3:28:8.08:294,8,0	1/1:15,0:15:9.03:137,9,0	1/1:20,0:19:18:213,18,0	0/0:15,0:16:10.85:0,11,182	1/1:23,0:23:28.91:688,29,0	1/1:25,0:25:5.83:134,6,0	1/1:12,2:15:11.93:271,12,0	1/1:6,1:8:3.01:122,3,0	1/1:13,0:13:3.01:89,3,0	1/1:13,0:16:2.92:64,3,0	1/1:8,1:11:6.02:228,6,0	0/0:24,0:26:10.89:0,11,474	0/1:10,0:10:60.70:61,0,61	0/0:12,0:9:3.01:0,3,74	0/0:20,0:20:24.08:0,24,558	0/0:9,0:12:12.04:0,12,205	1/1:9,0:15:3.01:64,3,0	0/1:15,0:17:7.20:137,0,7	0/1:11,4:16:9.74:116,0,10	1/1:9,3:15:6.02:188,6,0	1/1:11,0:21:36.12:821,36,0	0/1:21,0:21:10.25:110,0,10	0/1:8,1:10:15.70:138,0,16
chr10	24565153	.	C	CTATA	544.77	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-0.220;DP=571;FS=5.415;HRun=0;HaplotypeScore=89.5260;InbreedingCoeff=0.9843;MQ=84.51;MQ0=0;MQRankSum=-4.023;QD=49.52;ReadPosRankSum=0.748;VQSLOD=4.4712;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,11:11:24.08:638,24,0	0/0:12,0:12:33.07:0,33,580	0/0:25,0:25:72.25:0,72,1327	0/0:13,0:12:27.07:0,27,453	0/0:26,0:26:78.27:0,78,1439	0/0:19,0:19:54.19:0,54,1008	0/0:7,0:7:18.06:0,18,336	0/0:36,0:36:99:0,102,1812	0/0:21,0:21:57.18:0,57,1005	0/0:23,0:23:54.18:0,54,967	0/0:22,0:22:57.20:0,57,1057	0/0:19,0:19:54.19:0,54,995	0/0:29,0:29:78.23:0,78,1389	0/0:19,0:19:57.20:0,57,1064	0/0:21,0:21:60.21:0,60,1103	0/0:24,0:24:72.25:0,72,1337	0/0:9,0:9:24.08:0,24,431	0/0:18,0:18:54.18:0,54,990	0/0:18,0:18:45.12:0,45,788	0/0:28,0:28:78.27:0,78,1440	0/0:12,0:12:30.10:0,30,560	0/0:18,0:18:54.19:0,54,1008	0/0:24,0:24:68.80:0,69,1259	0/0:13,0:13:39.12:0,39,673	0/0:16,0:16:45.13:0,45,794	0/0:38,0:38:99:0,111,1998	0/0:41,0:41:99:0,120,2134	0/0:8,0:8:24.08:0,24,448
chr10	24565181	.	G	GT	51.43	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.626;DP=562;FS=11.002;HRun=8;HaplotypeScore=58.5526;InbreedingCoeff=0.9442;MQ=77.67;MQ0=0;MQRankSum=-2.314;QD=4.68;ReadPosRankSum=-1.865;VQSLOD=-0.3844;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,4:11:12.04:137,12,0	0/0:10,0:10:27.01:0,27,247	0/0:24,0:23:25.12:0,25,315	0/0:15,0:12:23.94:0,24,206	0/0:30,0:30:81.01:0,81,734	0/0:16,0:16:45.02:0,45,408	0/0:6,0:6:17.99:0,18,159	0/0:34,0:33:72.02:0,72,653	0/0:24,0:24:57.02:0,57,521	0/0:23,0:23:66.04:0,66,603	0/0:22,0:22:50.99:0,51,457	0/0:12,0:12:30:0,30,270	0/0:25,0:25:72.01:0,72,654	0/0:17,0:17:48.02:0,48,436	0/0:19,0:19:51:0,51,458	0/0:22,0:22:63.02:0,63,572	0/0:8,0:8:18:0,18,165	0/0:17,0:17:32.98:0,33,296	0/0:23,0:23:66.04:0,66,604	0/0:30,0:30:80.91:0,81,717	0/0:8,0:8:24.01:0,24,220	0/0:19,0:19:54.01:0,54,489	0/0:26,0:26:63:0,63,571	0/0:10,0:10:27.01:0,27,247	0/0:16,0:16:48.03:0,48,439	0/0:37,0:37:96.03:0,96,873	0/0:45,0:45:99:0,126,1137	0/0:13,0:13:35.96:0,36,320
chr10	24567327	.	AT	A	5238.31	PASS	AB=0.555;AC=34;AF=0.607;AN=56;BaseQRankSum=9.278;DP=415;FS=33.777;HRun=9;HaplotypeScore=41.5530;InbreedingCoeff=0.8427;MQ=70.16;MQ0=3;MQRankSum=1.649;QD=22.01;ReadPosRankSum=1.961;VQSLOD=3.0622;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:69.17:0,69,782	1/1:1,7:8:18.01:165,18,0	0/0:11,0:7:9.01:0,9,91	0/0:12,0:10:12.22:0,12,160	0/1:3,10:12:7.60:193,0,8	1/1:0,11:11:27.01:247,27,0	1/1:0,10:10:24.01:220,24,0	0/0:20,0:20:42.10:0,42,472	0/0:14,0:14:39.12:0,39,450	1/1:0,19:19:57.02:518,57,0	1/1:1,16:17:45.02:411,45,0	1/1:2,10:11:32.05:280,32,0	1/1:2,13:15:36.02:329,36,0	1/1:2,9:11:20.99:192,21,0	1/1:1,10:11:30.02:275,30,0	1/1:0,5:5:12.01:110,12,0	0/0:20,0:19:51.12:0,51,574	0/0:15,0:14:2.89:0,3,313	0/0:24,0:24:39.12:0,39,450	0/0:26,0:26:60.15:0,60,671	0/0:8,0:8:21.06:0,21,242	1/1:0,9:8:18.01:165,18,0	1/1:5,12:17:32.91:302,33,0	1/1:0,17:17:45.02:412,45,0	1/1:1,14:15:36.02:330,36,0	0/1:2,10:12:1.60:241,0,2	1/1:3,18:21:51.02:467,51,0	1/1:0,15:15:42.02:383,42,0
chr10	24570286	.	G	GA	10705.67	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-13.782;DP=529;FS=0.000;HRun=6;HaplotypeScore=49.4619;InbreedingCoeff=0.9968;MQ=79.22;MQ0=0;MQRankSum=0.901;QD=30.94;ReadPosRankSum=2.986;VQSLOD=5.1558;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:69.13:0,69,694	1/1:1,6:7:18.06:226,18,0	0/0:15,0:15:25.63:0,26,233	0/0:13,0:13:18.10:0,18,191	1/1:3,30:33:90.18:1094,90,0	1/1:2,12:14:33.11:415,33,0	1/1:0,13:13:33.11:415,33,0	1/1:5,23:28:69.20:844,69,0	0/0:16,0:16:42.08:0,42,422	1/1:3,23:26:69.16:825,69,0	1/1:4,14:19:45.05:520,45,0	1/1:1,9:10:26.83:331,27,0	1/1:1,14:15:39.12:491,39,0	1/1:0,11:11:30.10:377,30,0	1/1:3,11:14:33.11:415,33,0	1/1:1,16:17:39.08:473,39,0	0/0:21,0:21:54.10:0,54,542	0/0:26,0:26:66.11:0,66,661	0/0:24,0:24:57.11:0,57,576	0/0:25,0:25:69.14:0,69,696	0/0:20,0:20:60.04:0,60,574	1/1:3,15:18:42.13:528,42,0	1/1:4,17:21:42.13:528,42,0	1/1:0,16:15:39.12:491,39,0	1/1:2,21:23:57.18:717,57,0	1/1:2,24:26:72.21:882,72,0	1/1:3,20:23:57.18:717,57,0	1/1:0,12:12:33.11:415,33,0
chr10	24572951	.	A	AGTTT	20251.87	PASS	AB=1.000;AC=38;AF=0.679;AN=56;BaseQRankSum=14.282;DP=674;FS=1.513;HRun=0;HaplotypeScore=122.4733;InbreedingCoeff=0.8197;MQ=63.77;MQ0=0;MQRankSum=-3.502;QD=40.67;ReadPosRankSum=7.044;VQSLOD=5.0204;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:23:99:317,0,113	1/1:2,10:12:18.02:394,18,0	0/0:28,0:27:61.83:0,62,944	0/0:24,0:22:65.45:0,65,1030	1/1:6,23:30:63.09:1407,63,0	1/1:7,26:33:45.20:1064,45,0	1/1:3,9:12:15.52:375,16,0	0/1:39,0:39:99:442,0,304	0/0:12,0:12:36.09:0,36,601	1/1:4,34:40:93.93:2120,94,0	1/1:1,21:22:48.04:1017,48,0	1/1:2,28:31:69.24:1721,69,0	1/1:2,22:25:50.53:1267,51,0	1/1:2,20:23:33.11:795,33,0	1/1:0,24:25:51.18:1272,51,0	1/1:0,22:22:39.13:973,39,0	0/0:24,0:24:72.16:0,72,1166	0/0:10,0:10:9.09:0,9,368	0/0:21,0:21:57.09:0,57,915	0/0:40,0:40:99:0,111,1880	0/0:16,0:16:42.14:0,42,787	1/1:4,25:30:71.58:1684,72,0	1/1:3,25:29:49.89:1288,50,0	1/1:3,9:12:21.07:524,21,0	1/1:8,18:28:20.14:593,20,0	1/1:1,25:26:73.02:1376,73,0	1/1:1,26:28:51.18:1250,51,0	1/1:0,8:8:15.05:374,15,0
chr10	24572955	.	A	AGTTT	22369.69	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=9.874;DP=657;FS=3.934;HRun=0;HaplotypeScore=117.2751;InbreedingCoeff=0.9911;MQ=63.60;MQ0=0;MQRankSum=-4.121;QD=46.31;ReadPosRankSum=3.274;VQSLOD=5.7671;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,19:25:39.13:972,39,0	1/1:12,0:12:21.02:421,21,0	0/0:26,0:25:53.31:0,53,843	0/0:26,0:24:50.02:0,50,804	1/1:33,0:33:66.13:1456,66,0	1/1:32,0:32:50.58:1099,51,0	1/1:11,0:11:18.05:399,18,0	1/1:8,31:41:99:1851,99,0	0/0:13,0:13:27.08:0,27,426	1/1:39,0:39:99:2070,99,0	1/1:21,0:21:45.07:996,45,0	1/1:29,0:29:72.23:1737,72,0	1/1:26,0:26:54.18:1298,54,0	1/1:20,0:20:33.11:799,33,0	1/1:24,0:24:54.18:1300,54,0	1/1:21,0:21:39.13:974,39,0	0/0:25,0:25:57.16:0,57,895	0/0:9,0:10:14.96:0,15,233	0/0:21,0:21:39.09:0,39,601	0/0:38,0:38:96.26:0,96,1528	0/0:14,0:14:39.13:0,39,677	1/1:27,0:27:69.15:1663,69,0	1/1:29,0:29:56.99:1313,57,0	1/1:12,0:12:21.07:524,21,0	1/1:24,0:24:22.10:595,22,0	1/1:22,0:22:60.16:1280,60,0	1/1:27,0:27:51.18:1247,51,0	1/1:8,0:8:15.05:374,15,0
chr10	24573583	.	C	CATAT	7008.82	PASS	AB=0.975;AC=42;AF=0.750;AN=56;BaseQRankSum=-2.727;DP=300;FS=11.397;HRun=0;HaplotypeScore=50.3993;InbreedingCoeff=0.6967;MQ=72.59;MQ0=3;MQRankSum=-2.266;QD=28.72;ReadPosRankSum=0.040;VQSLOD=2.8714;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,0:17:18.06:293,18,0	1/1:0,4:4:9.03:200,9,0	0/1:8,0:4:8.76:9,0,33	0/1:18,0:9:0.06:0,0,34	1/1:6,7:13:12.04:277,12,0	1/1:3,17:20:39.13:995,39,0	1/1:4,2:6:6.02:153,6,0	1/1:6,0:37:87.19:434,87,0	0/0:5,0:5:12.04:0,12,210	1/1:3,6:9:18.06:455,18,0	1/1:0,7:8:12.04:306,12,0	1/1:0,6:6:6.02:153,6,0	1/1:2,7:9:15.05:383,15,0	1/1:3,6:9:12.04:306,12,0	1/1:2,0:5:3.01:53,3,0	1/1:2,4:7:9.03:230,9,0	0/0:10,0:10:30.09:0,30,485	0/0:9,0:9:27.09:0,27,473	0/0:20,0:20:51.15:0,51,821	0/0:9,0:9:24.08:0,24,420	0/0:3,0:3:9.01:0,9,129	1/1:0,3:4:6.02:124,6,0	1/1:1,7:8:9.03:229,9,0	1/1:0,4:5:3.01:77,3,0	1/1:3,11:14:30.10:755,30,0	1/1:2,3:5:9.03:223,9,0	1/1:3,14:17:27.09:686,27,0	1/1:0,14:14:27.09:669,27,0
chr10	24575367	.	G	GA	268.53	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=-2.975;DP=498;FS=2.503;HRun=7;HaplotypeScore=47.2890;InbreedingCoeff=0.7165;MQ=79.78;MQ0=0;MQRankSum=-3.274;QD=11.68;ReadPosRankSum=1.435;VQSLOD=1.7288;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,12:13:30.09:362,30,0	0/0:5,0:5:12.01:0,12,116	0/1:10,0:10:2.70:3,0,125	0/0:16,0:16:42.05:0,42,399	0/0:21,0:21:57.09:0,57,550	0/0:31,0:31:75.10:0,75,719	0/0:13,0:13:30.03:0,30,290	0/0:30,0:30:75.09:0,75,712	0/0:23,0:23:69.08:0,69,658	0/0:18,0:18:54.09:0,54,521	0/0:15,0:15:42.04:0,42,399	0/0:27,0:27:72.10:0,72,690	0/0:28,0:28:81.12:0,81,777	0/0:20,0:20:57.09:0,57,550	0/0:19,0:19:54.09:0,54,521	0/0:19,0:19:54.08:0,54,521	0/0:18,0:18:45.07:0,45,435	0/0:10,0:10:21.21:0,21,227	0/0:17,0:17:45.03:0,45,422	0/0:17,0:17:51.08:0,51,492	0/0:18,0:18:48.04:0,48,455	0/0:10,0:10:27.04:0,27,261	0/0:15,0:15:42.05:0,42,399	0/0:11,0:11:33.05:0,33,319	0/0:21,0:21:54.04:0,54,507	0/0:19,0:19:53.45:0,53,501	0/0:27,0:27:75.07:0,75,705	0/0:7,0:7:18.03:0,18,174
chr10	24576208	.	C	CT	12362.26	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-10.916;DP=518;FS=15.398;HRun=6;HaplotypeScore=47.3510;InbreedingCoeff=0.9814;MQ=71.71;MQ0=1;MQRankSum=-1.516;QD=32.19;ReadPosRankSum=4.942;VQSLOD=3.3625;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,21:21:57.18:717,57,0	1/1:0,7:7:18.06:226,18,0	0/0:6,0:6:12.02:0,12,122	0/0:9,0:9:14.56:0,15,139	1/1:3,38:40:99:1247,102,0	1/1:3,25:27:41.62:837,42,0	1/1:1,10:11:27.09:340,27,0	0/0:28,0:28:66.11:0,66,653	0/0:11,0:11:30.07:0,30,306	1/1:4,33:37:99:1219,99,0	1/1:1,35:36:99:1283,102,0	1/1:1,11:12:27.09:340,27,0	1/1:2,13:15:36.12:453,36,0	1/1:2,14:16:36.12:453,36,0	1/1:1,16:17:45.14:566,45,0	1/1:2,16:18:45.14:566,45,0	0/0:22,0:22:57.09:0,57,573	0/0:11,0:11:24.05:0,24,245	0/0:19,0:19:42.09:0,42,429	0/0:23,0:23:66.15:0,66,671	0/0:5,0:5:15.02:0,15,146	1/1:6,8:14:24.08:302,24,0	1/1:1,23:24:69.22:868,69,0	1/1:3,6:9:18.06:226,18,0	1/1:1,24:25:63.20:793,63,0	1/1:0,20:20:60.19:755,60,0	1/1:1,27:27:81.26:1019,81,0	1/1:1,4:5:12.04:151,12,0
chr10	24577543	.	TTC	T	1663.42	PASS	AB=0.915;AC=38;AF=0.679;AN=56;BaseQRankSum=11.658;DP=453;FS=14.883;HRun=0;HaplotypeScore=144.3003;InbreedingCoeff=0.5323;MQ=59.70;MQ0=2;MQRankSum=-7.095;QD=4.95;ReadPosRankSum=0.187;VQSLOD=1.9101;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:26:1.40:44,0,1	1/1:4,0:4:5.36:23,5,0	0/0:16,0:9:8.40:0,8,185	0/0:17,0:11:5.09:0,5,97	1/1:22,0:22:35.35:148,35,0	1/1:13,0:13:9.75:38,10,0	1/1:12,0:12:13.34:75,13,0	1/1:34,0:33:35.02:232,35,0	0/0:11,0:11:30.10:0,30,474	1/1:12,0:12:0.84:73,1,0	1/1:21,0:21:23.79:97,24,0	1/1:19,0:19:13.15:113,13,0	1/1:17,0:17:22.81:95,23,0	1/1:12,0:12:17.22:93,17,0	1/1:14,0:14:18.81:80,19,0	0/1:19,0:19:35.66:82,0,36	0/0:22,1:23:24.65:0,25,819	0/1:8,2:10:44.66:45,0,253	0/1:15,4:19:99:103,0,359	0/0:22,2:24:21.64:0,22,808	0/0:11,0:11:24.07:0,24,354	1/1:6,0:6:6.45:22,6,0	1/1:21,0:21:28.67:118,29,0	1/1:4,0:3:2.68:12,3,0	1/1:13,0:13:21.43:91,21,0	1/1:17,0:17:29.62:137,30,0	1/1:21,0:21:29.86:131,30,0	0/0:15,0:15:2.10:0,2,20
chr10	24577561	.	CTCTCTT	C	3966.58	PASS	AB=0.948;AC=36;AF=0.643;AN=56;BaseQRankSum=13.193;DP=477;FS=15.612;HRun=0;HaplotypeScore=197.7274;InbreedingCoeff=0.6658;MQ=57.12;MQ0=1;MQRankSum=-5.554;QD=12.17;ReadPosRankSum=0.513;VQSLOD=1.8039;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:26:21.51:22,0,223	1/1:3,0:3:5.93:40,6,0	0/0:23,0:13:14.55:0,15,492	0/0:20,0:16:18.51:0,19,316	1/1:20,3:23:47.52:338,48,0	1/1:10,0:10:21.58:134,22,0	1/1:12,0:12:24.51:151,25,0	0/1:28,0:27:99:149,0,127	0/0:12,0:12:33.10:0,33,992	1/1:19,0:19:4.19:268,4,0	1/1:21,4:25:40.42:277,40,0	1/1:16,2:18:45.72:292,46,0	1/1:14,2:16:26.79:208,27,0	1/1:11,0:11:30.49:197,30,0	1/1:15,4:19:26:268,26,0	0/1:14,5:19:54.61:270,0,55	0/0:24,0:24:62.52:0,63,1829	0/0:11,0:11:16.11:0,16,668	0/0:21,0:21:51.09:0,51,1042	0/0:29,0:29:87.14:0,87,2105	0/0:10,0:10:27.06:0,27,705	1/1:6,2:8:4.35:98,4,0	1/1:18,0:18:32.31:216,32,0	1/1:4,4:7:14.89:107,15,0	1/1:15,2:17:34.06:230,34,0	1/1:19,1:20:36.46:343,36,0	1/1:21,1:22:53.55:358,54,0	0/1:4,0:4:0.67:1,0,46
chr10	24577563	.	CTCTT	C	9730.62	PASS	AB=0.878;AC=37;AF=0.661;AN=56;BaseQRankSum=12.248;DP=472;FS=14.010;HRun=0;HaplotypeScore=160.3116;InbreedingCoeff=0.7183;MQ=55.95;MQ0=1;MQRankSum=-5.063;QD=30.03;ReadPosRankSum=-0.472;VQSLOD=4.0994;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:25:41.63:42,0,132	1/1:0,3:3:6.02:113,6,0	0/0:24,0:14:26.15:0,26,452	0/0:18,0:15:20.95:0,21,261	1/1:6,17:23:48.07:797,48,0	1/1:4,6:10:23.93:314,24,0	1/1:2,10:12:27.09:479,27,0	1/1:27,0:26:8.77:263,9,0	0/0:11,0:11:33.10:0,33,775	1/1:12,7:19:50.85:671,51,0	1/1:12,12:24:43.43:621,43,0	1/1:6,12:18:51.05:788,51,0	1/1:6,9:15:36.01:539,36,0	1/1:2,9:11:33.04:560,33,0	1/1:8,11:19:44.73:554,45,0	0/1:8,11:19:29.91:640,0,30	0/0:23,0:24:68.03:0,68,1427	0/0:11,0:11:13.42:0,13,471	0/0:19,0:19:50.99:0,51,799	0/0:29,0:29:87.12:0,87,1670	0/0:11,0:11:30.06:0,30,585	1/1:8,1:9:8.15:209,8,0	1/1:3,15:18:33.11:611,33,0	1/1:5,3:7:11.41:138,11,0	1/1:6,11:17:34.67:532,35,0	1/1:10,10:20:59.98:903,60,0	1/1:11,12:23:65.89:922,66,0	0/1:4,0:4:32.80:33,0,34
chr10	24577565	.	CTT	C	5320.06	PASS	AB=1.000;AC=38;AF=0.679;AN=56;BaseQRankSum=13.437;DP=472;FS=6.774;HRun=3;HaplotypeScore=161.0521;InbreedingCoeff=0.6502;MQ=57.26;MQ0=1;MQRankSum=-6.108;QD=16.07;ReadPosRankSum=0.400;VQSLOD=1.7421;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:25:41.73:42,0,68	1/1:3,0:3:5.97:44,6,0	0/0:24,0:16:22.26:0,22,425	0/0:22,0:18:17.73:0,18,276	1/1:23,0:23:47.71:350,48,0	1/1:10,0:10:23.61:156,24,0	1/1:12,0:12:24.76:181,25,0	1/1:18,9:26:68.43:708,68,0	0/0:13,0:13:39.10:0,39,628	1/1:17,0:17:50.61:362,51,0	1/1:24,0:24:42.95:331,43,0	1/1:17,0:17:50.72:383,51,0	1/1:15,0:15:38.75:284,39,0	1/1:11,0:11:31.03:219,31,0	1/1:20,0:20:47.53:338,48,0	0/1:18,0:18:7.15:298,0,7	0/0:23,0:23:48.69:0,49,1006	0/1:11,0:11:16.39:16,0,295	0/0:17,0:17:9.34:0,9,497	0/0:30,0:30:81.05:0,81,1234	0/0:11,0:11:30.06:0,30,445	1/1:9,0:9:8.18:107,8,0	1/1:17,0:17:32.83:246,33,0	1/1:8,0:7:11.37:104,11,0	1/1:17,0:17:34.45:257,34,0	1/1:20,0:20:58.43:423,58,0	1/1:23,0:23:64.09:458,64,0	0/1:4,0:4:14.07:14,0,15
chr10	24577588	.	T	TG	2939.25	PASS	AB=0.512;AC=39;AF=0.696;AN=56;BaseQRankSum=13.547;DP=518;FS=6.474;HRun=6;HaplotypeScore=165.6575;InbreedingCoeff=0.8563;MQ=58.39;MQ0=2;MQRankSum=-8.429;QD=8.67;ReadPosRankSum=5.217;VQSLOD=0.2684;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:1,3:22:17.65:45,0,18	1/1:4,0:4:8.43:43,8,0	0/0:28,0:22:51.11:0,51,518	0/0:30,0:26:43.48:0,43,537	1/1:21,0:21:30.71:137,31,0	1/1:14,0:14:23.12:108,23,0	1/1:12,0:12:8.44:43,8,0	1/1:7,16:23:51.16:639,51,0	0/0:16,0:16:48.11:0,48,489	1/1:20,0:21:44.49:200,44,0	1/1:22,0:23:41.66:200,42,0	1/1:19,0:19:42.32:214,42,0	1/1:17,0:17:30.06:134,30,0	1/1:12,0:12:19.85:103,20,0	1/1:21,0:21:36.57:173,37,0	1/1:19,0:19:19.39:188,19,0	0/0:16,0:16:44.84:0,45,440	0/0:8,0:8:21.01:0,21,203	0/0:19,0:19:39.08:0,39,398	0/0:36,0:36:99:0,99,1009	0/0:25,0:25:72.13:0,72,721	1/1:13,0:13:10.97:49,11,0	1/1:19,0:19:13.24:62,13,0	1/1:10,0:10:16.68:80,17,0	1/1:20,0:20:33.41:149,33,0	1/1:21,0:21:55.86:279,56,0	1/1:27,0:27:60.98:292,61,0	1/1:1,0:1:2.74:12,3,0
chr10	24577590	.	G	GGGA	13049.77	PASS	AB=1.000;AC=37;AF=0.661;AN=56;BaseQRankSum=9.714;DP=523;FS=17.130;HRun=0;HaplotypeScore=145.6590;InbreedingCoeff=0.8595;MQ=58.90;MQ0=2;MQRankSum=-9.806;QD=40.91;ReadPosRankSum=5.715;VQSLOD=5.1569;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:17,0:17:17.23:47,0,17	1/1:2,3:5:12.01:199,12,0	0/0:28,0:22:57.12:0,57,913	0/0:33,0:28:52.59:0,53,951	1/1:1,17:18:36.12:774,36,0	1/1:4,13:17:30.10:603,30,0	1/1:3,9:12:15.05:285,15,0	0/0:24,0:24:49.93:0,50,232	0/0:16,0:16:48.16:0,48,814	1/1:4,15:19:54.18:1180,54,0	1/1:4,21:25:45.15:951,45,0	1/1:0,19:19:51.11:1033,51,0	1/1:3,14:19:36.12:793,36,0	1/1:2,9:12:24.08:458,24,0	1/1:1,18:19:42.14:889,42,0	1/1:2,18:21:3.02:1079,3,0	0/0:14,0:14:42.14:0,42,716	0/0:8,0:8:21.07:0,21,348	0/0:20,0:20:42.14:0,42,690	0/0:36,0:36:99:0,102,1703	0/0:25,0:25:75.25:0,75,1246	1/1:3,11:14:17.96:308,18,0	1/1:1,19:20:17.84:371,18,0	1/1:1,10:11:18.06:393,18,0	1/1:2,19:21:39.13:842,39,0	1/1:4,18:22:60.20:1315,60,0	1/1:1,26:27:66.23:1462,66,0	1/1:0,1:1:3.01:67,3,0
chr10	24578114	.	AC	A	4868.90	PASS	AB=0.655;AC=19;AF=0.339;AN=56;BaseQRankSum=16.377;DP=732;FS=2.412;HRun=1;HaplotypeScore=138.8972;InbreedingCoeff=-0.3367;MQ=55.86;MQ0=20;MQRankSum=3.960;QD=10.49;ReadPosRankSum=13.597;VQSLOD=0.4585;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:31:21.83:0,22,201	0/1:5,5:10:13.52:107,0,14	0/0:27,0:7:21.07:0,21,266	0/0:44,0:16:38.99:0,39,477	0/1:14,18:34:20.04:345,0,20	0/1:15,10:24:47.59:221,0,48	0/1:9,11:20:14.88:213,0,15	0/0:34,0:32:91.71:0,92,702	0/0:17,0:17:51.17:0,51,744	0/1:17,12:28:55.41:308,0,55	0/1:16,21:36:18.39:404,0,18	0/1:10,15:25:31.77:230,0,32	0/1:8,14:22:13.82:267,0,14	0/1:14,17:31:17.66:326,0,18	0/1:13,16:27:34.74:300,0,35	0/1:14,7:21:66.82:173,0,67	0/0:19,0:19:51.73:0,52,725	0/0:16,0:15:42.14:0,42,628	0/0:24,0:24:66.76:0,67,905	0/0:22,0:22:58.97:0,59,865	0/0:32,0:32:92.42:0,92,1375	0/1:10,14:25:25.31:237,0,25	0/1:8,14:23:40.55:205,0,41	0/1:10,15:25:29.84:272,0,30	1/1:10,20:30:63.85:523,64,0	0/1:16,17:32:70.44:328,0,70	0/1:19,15:34:65.44:332,0,65	0/1:5,6:11:70.19:78,0,70
chr10	24578115	.	C	CAA	1695.95	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-9.865;DP=735;FS=1.150;HRun=1;HaplotypeScore=171.9221;InbreedingCoeff=0.9922;MQ=55.96;MQ0=20;MQRankSum=1.890;QD=24.94;ReadPosRankSum=-3.998;VQSLOD=1.1022;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,25:31:34.49:758,34,0	0/0:11,0:11:27.26:0,27,121	0/0:27,0:7:20.92:0,21,172	0/0:43,0:15:17.59:0,18,249	0/0:34,0:34:94.53:0,95,443	0/0:25,0:24:65.86:0,66,307	0/0:22,0:22:51.48:0,51,222	1/1:3,32:34:86.74:1060,87,0	0/0:17,0:17:45.06:0,45,555	0/0:29,0:28:73.57:0,74,312	0/0:36,0:35:95.98:0,96,434	0/0:26,0:26:65.94:0,66,309	0/0:22,0:22:57.45:0,57,260	0/0:33,0:33:84.94:0,85,387	0/0:29,0:27:73.10:0,73,315	0/0:22,0:22:46.17:0,46,234	0/0:19,0:19:53.85:0,54,657	0/0:16,0:15:41.91:0,42,479	0/0:24,0:24:66.63:0,67,766	0/0:22,0:22:57.05:0,57,759	0/0:32,0:32:88.59:0,89,1098	0/0:25,0:25:67.71:0,68,294	0/0:23,0:23:63.74:0,64,300	0/0:25,0:25:66.42:0,66,308	0/0:30,0:30:79.43:0,79,352	0/0:32,0:31:83.78:0,84,367	0/0:32,0:32:88.77:0,89,417	0/0:11,0:11:28.14:0,28,141
chr10	24578116	.	AC	A	4844.18	PASS	AB=0.661;AC=19;AF=0.339;AN=56;BaseQRankSum=16.211;DP=731;FS=2.416;HRun=1;HaplotypeScore=139.1262;InbreedingCoeff=-0.3143;MQ=56.76;MQ0=20;MQRankSum=4.735;QD=10.35;ReadPosRankSum=13.345;VQSLOD=0.5322;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:42.33:0,42,207	0/1:6,5:11:8.80:128,0,9	0/0:27,0:7:21.07:0,21,266	0/0:44,0:16:36.10:0,36,442	0/1:16,18:34:17.47:369,0,17	0/1:15,10:24:54.79:237,0,55	0/1:11,11:22:10.11:216,0,10	0/0:37,0:35:99:0,102,858	0/0:15,0:15:45.15:0,45,669	0/1:17,12:28:90.07:307,0,90	0/1:16,21:36:17.77:405,0,18	0/1:11,15:26:28.23:231,0,28	0/1:7,14:21:9.07:245,0,9	0/1:16,17:33:26.77:327,0,27	0/1:13,16:27:29.96:300,0,30	0/1:16,7:23:78.02:181,0,78	0/0:19,0:19:51.73:0,52,726	0/0:16,0:15:42.14:0,42,628	0/0:24,0:24:66.19:0,66,898	0/0:21,0:21:56:0,56,828	0/0:31,0:31:89.41:0,89,1337	0/1:11,14:25:25:253,0,25	0/1:9,14:23:41:221,0,41	0/1:10,15:25:34.41:272,0,34	1/1:10,20:30:55.97:493,56,0	0/1:15,17:31:85.99:309,0,86	0/1:17,15:32:70.78:288,0,71	0/1:5,5:11:63.17:63,0,74
chr10	24580637	.	TG	T	420.11	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=1.787;DP=352;FS=1.824;HRun=6;HaplotypeScore=45.9703;InbreedingCoeff=0.8994;MQ=93.15;MQ0=0;MQRankSum=1.490;QD=26.26;ReadPosRankSum=-3.336;VQSLOD=2.2550;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:36.12:0,36,474	0/0:12,0:12:36.10:0,36,459	0/0:17,0:17:42.12:0,42,528	0/0:15,0:15:30.41:0,30,380	0/0:15,0:15:45.14:0,45,578	0/0:15,0:15:45.15:0,45,591	0/0:10,0:10:21.07:0,21,276	1/1:0,16:16:48.12:515,48,0	0/0:14,0:14:42.09:0,42,506	0/0:22,0:22:63.18:0,63,791	0/0:18,0:18:53.95:0,54,668	0/0:9,0:9:27.07:0,27,339	0/0:15,0:15:42.14:0,42,553	0/0:15,0:15:39.12:0,39,500	0/0:10,0:10:27.09:0,27,355	0/0:5,0:5:12.04:0,12,158	0/0:12,0:12:36.09:0,36,456	0/0:6,0:6:18.06:0,18,237	0/0:5,0:5:12.01:0,12,127	0/0:21,0:21:63.19:0,63,814	0/0:16,0:16:45.15:0,45,592	0/0:9,0:9:27.09:0,27,355	0/0:10,0:10:27.07:0,27,340	0/0:5,0:5:15.05:0,15,197	0/0:12,0:12:36.12:0,36,473	0/0:9,0:9:27.09:0,27,355	0/0:22,0:22:63.19:0,63,812	0/0:5,0:5:15.05:0,15,197
chr10	24581113	.	C	CGACT	27189.16	PASS	AB=0.564;AC=36;AF=0.643;AN=56;BaseQRankSum=-15.082;DP=690;FS=5.831;HRun=0;HaplotypeScore=108.1873;InbreedingCoeff=0.8685;MQ=90.13;MQ0=0;MQRankSum=-6.825;QD=59.11;ReadPosRankSum=4.180;VQSLOD=6.4287;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,120,2234	1/1:3,12:15:27.09:719,27,0	0/0:28,0:28:78.27:0,78,1407	0/0:29,0:29:70.76:0,71,1186	1/1:5,26:32:60.21:1598,60,0	1/1:1,21:22:54.19:1438,54,0	1/1:4,21:27:48.16:1280,48,0	1/1:12,24:37:99:2408,99,0	0/0:28,0:28:84.27:0,84,1502	1/1:3,28:31:87.28:2162,87,0	1/1:1,16:20:39.13:1039,39,0	1/1:2,13:15:36.12:959,36,0	1/1:2,16:18:45.15:1194,45,0	1/1:4,24:28:66.23:1757,66,0	1/1:3,22:25:51.18:1360,51,0	0/1:3,17:20:7.83:1152,0,8	0/0:19,0:19:54.19:0,54,1007	0/0:5,0:5:12.04:0,12,224	0/0:16,0:16:45.15:0,45,837	0/0:28,0:28:78.22:0,78,1392	0/0:35,0:35:99:0,99,1818	1/1:3,23:26:51.18:1359,51,0	1/1:1,33:33:81.19:2159,81,0	1/1:2,21:24:53.92:1439,54,0	1/1:3,17:22:45.15:1200,45,0	0/1:6,14:20:4.83:1195,0,5	1/1:3,25:31:72.17:1896,72,0	1/1:1,11:12:33.11:877,33,0
chr10	24582612	.	CCTCTCTCTCT	C	5733.86	PASS	AC=36;AF=0.667;AN=54;BaseQRankSum=9.895;DP=400;FS=42.641;HRun=0;HaplotypeScore=173.3766;InbreedingCoeff=0.7930;MQ=61.62;MQ0=8;MQRankSum=-7.944;QD=25.04;ReadPosRankSum=-0.051;VQSLOD=2.8235;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:3,0:16:3.01:0,3,74	1/1:6,7:13:12.04:362,12,0	0/0:18,0:10:3.01:0,3,42	0/0:27,0:17:20.19:0,20,321	1/1:9,4:14:6.02:160,6,0	1/1:9,5:16:15.01:382,15,0	1/1:8,2:9:3.01:90,3,0	1/1:18,0:17:20.65:145,21,0	0/0:4,0:11:27.07:0,27,567	1/1:8,5:16:32.98:632,33,0	1/1:8,2:12:6.02:181,6,0	1/1:4,4:10:6.02:181,6,0	1/1:4,4:9:12.04:361,12,0	1/1:7,5:12:14.98:373,15,0	1/1:5,7:13:15.05:451,15,0	1/1:9,6:14:15.05:451,15,0	0/0:12,0:29:48.13:0,48,1253	0/0:2,0:10:18.06:0,18,443	0/0:13,0:15:24.06:0,24,386	0/0:18,0:24:45.07:0,45,847	0/0:5,0:11:15.05:0,15,325	1/1:4,7:12:11.86:446,12,0	1/1:2,5:9:6.02:136,6,0	./.	1/1:5,10:21:15.05:452,15,0	1/1:5,3:10:16.87:397,17,0	1/1:10,3:16:21.07:522,21,0	1/1:2,0:2:2.68:11,3,0
chr10	24582673	.	GGT	G	1716.59	PASS	AB=0.867;AC=33;AF=0.589;AN=56;BaseQRankSum=7.684;DP=451;FS=3.872;HRun=0;HaplotypeScore=178.6648;InbreedingCoeff=0.5993;MQ=51.46;MQ0=21;MQRankSum=-5.896;QD=7.37;ReadPosRankSum=-2.260;VQSLOD=3.2327;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:3,0:1:0:0,0,0	1/1:3,6:9:17.86:134,18,0	0/0:52,0:15:18.20:0,18,200	0/0:58,0:26:14.36:0,14,130	1/1:7,8:15:6.43:57,6,0	1/1:8,3:10:8.90:76,9,0	1/1:9,6:12:11.69:136,12,0	0/0:16,0:14:33.11:0,33,476	0/0:11,0:11:7.28:0,7,132	1/1:9,9:17:30.09:346,30,0	1/1:3,6:9:3.15:20,3,0	1/1:4,9:12:11.40:74,11,0	1/1:6,6:12:20.80:189,21,0	1/1:9,6:14:8.78:57,9,0	1/1:11,6:17:11.74:94,12,0	0/1:6,6:12:5.59:83,0,6	0/0:27,0:27:42.83:0,43,562	0/0:14,0:14:20.39:0,20,275	0/1:13,1:13:57.94:58,0,187	0/0:13,0:13:24.03:0,24,289	0/0:14,0:14:8.33:0,8,239	1/1:8,4:12:8.87:66,9,0	1/1:5,9:13:2.77:17,3,0	0/0:6,2:8:0:0,0,0	1/1:8,8:16:8.63:59,9,0	1/1:9,4:13:22.56:208,23,0	1/1:6,4:10:18.01:190,18,0	0/1:8,0:3:20.75:41,0,21
chr10	24582684	.	GTGTGTGTGTT	G	1532.95	PASS	AB=0.987;AC=26;AF=0.464;AN=56;BaseQRankSum=1.610;DP=463;FS=0.000;HRun=0;HaplotypeScore=217.9770;InbreedingCoeff=0.0846;MQ=45.53;MQ0=24;MQRankSum=-3.909;QD=5.14;ReadPosRankSum=1.421;VQSLOD=2.0276;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:3,0:1:2.37:0,2,8	1/1:9,0:9:2.33:16,2,0	0/1:41,0:12:8.91:9,0,69	0/0:41,0:16:1.50:0,1,43	0/1:17,0:16:4.12:4,0,4	1/1:16,1:15:8.21:90,8,0	0/1:16,0:13:12.18:45,0,12	0/0:19,0:18:32.87:0,33,271	0/1:13,0:12:4.29:4,0,151	1/1:17,0:16:7.49:149,7,0	1/1:13,0:13:0.84:17,1,0	0/1:15,1:15:15.09:74,0,15	1/1:8,2:10:16.52:309,17,0	0/1:16,0:15:5.92:8,0,6	0/1:15,0:15:6.13:22,0,6	0/1:12,0:12:21.51:84,0,22	0/0:32,0:32:27.68:0,28,511	0/1:16,0:15:52.64:53,0,225	0/1:16,0:14:0.75:1,0,193	0/0:15,0:15:25.32:0,25,226	0/0:14,0:14:19.60:0,20,283	1/1:16,0:16:6.36:57,6,0	0/0:15,1:15:7.36:0,7,21	0/0:7,0:6:0.47:0,0,1	0/0:17,0:17:8:0,8,28	1/1:14,1:14:31.53:364,32,0	0/1:12,0:12:11.68:351,0,12	0/1:9,0:4:38.34:38,0,85
chr10	24582690	.	GTGTT	G	1688.38	PASS	AB=0.973;AC=31;AF=0.554;AN=56;BaseQRankSum=-0.499;DP=466;FS=10.500;HRun=0;HaplotypeScore=182.7417;InbreedingCoeff=-0.1821;MQ=40.56;MQ0=27;MQRankSum=-0.668;QD=4.41;ReadPosRankSum=4.923;VQSLOD=1.6730;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:3,0:1:2.37:0,2,8	1/1:12,0:12:2.17:16,2,0	0/1:35,0:9:8.91:9,0,69	0/0:32,0:9:1.50:0,1,42	0/1:16,0:16:3.17:3,0,3	0/1:20,0:18:10.21:71,0,10	1/1:16,0:12:0.51:44,1,0	0/0:18,0:17:32.87:0,33,271	0/1:15,0:14:32.21:145,0,32	1/1:18,0:18:42.07:241,42,0	1/1:13,0:13:0.36:22,0,0	0/1:17,0:15:15.99:24,0,16	1/1:10,0:10:17.41:132,17,0	0/1:15,0:14:4.74:16,0,5	0/1:14,0:14:7.24:7,0,8	0/1:15,0:14:14.82:37,0,15	0/1:30,0:30:99:178,0,184	0/1:14,0:13:37.98:38,0,115	0/1:14,6:16:99:122,0,100	0/1:15,1:16:71.66:72,0,83	0/1:13,1:13:92.41:92,0,94	1/1:15,0:15:6.64:50,7,0	0/0:23,0:21:10.93:0,11,40	0/0:6,0:5:0.47:0,0,1	0/1:16,0:16:9.57:10,0,30	1/1:18,0:17:42.98:281,43,0	1/1:14,0:14:23.48:197,23,0	0/1:9,0:4:21.95:37,0,22
chr10	24582693	.	TTTGTGTGTG	T	616.55	PASS	AB=0.932;AC=12;AF=0.214;AN=56;BaseQRankSum=3.884;DP=442;FS=6.501;HRun=0;HaplotypeScore=191.6639;InbreedingCoeff=-0.2165;MQ=39.43;MQ0=29;MQRankSum=-4.828;QD=3.30;ReadPosRankSum=-0.675;VQSLOD=1.6664;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:2,0:1:2.68:0,3,11	0/1:9,0:9:8.99:30,0,9	0/0:32,0:7:17.98:0,18,198	0/1:28,0:7:10.01:10,0,71	0/0:16,0:16:0.86:0,1,5	0/0:16,0:14:21.48:0,21,112	0/0:15,1:12:12.37:0,12,51	0/0:18,0:17:39.13:0,39,508	0/0:15,0:14:35.48:0,35,352	0/0:15,0:16:2.24:0,2,167	0/0:10,0:12:11.98:0,12,126	0/1:17,0:15:15.88:59,0,16	0/1:8,2:10:46.57:171,0,47	0/1:15,0:14:6.90:7,0,41	0/1:8,4:13:5.45:5,0,33	0/1:14,0:13:50.80:55,0,51	0/0:32,0:31:65.81:0,66,746	0/1:14,0:13:19.64:20,0,343	0/0:20,0:16:43.91:0,44,537	0/0:15,0:15:29.06:0,29,392	0/0:14,0:13:33.11:0,33,402	0/1:12,2:14:28.54:29,0,29	0/1:21,0:20:16.81:29,0,17	0/0:3,1:3:0:0,0,0	0/0:15,0:15:20.44:0,20,140	0/1:18,0:17:99:110,0,128	0/1:9,3:12:99:234,0,129	0/0:10,0:4:10.26:0,10,157
chr10	24582694	.	TTGTGTGTGTGTGTGTGTGTGTGTG	T	54.32	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=3.089;DP=444;FS=11.028;HRun=0;HaplotypeScore=268.0402;InbreedingCoeff=0.2940;MQ=39.34;MQ0=29;MQRankSum=-3.074;QD=0.74;ReadPosRankSum=-4.628;VQSLOD=0.6294;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:3,0:1:0:0,0,0	0/0:9,0:9:11.90:0,12,127	0/0:30,0:6:3.01:0,3,90	0/0:27,0:6:2.97:0,3,10	0/1:18,0:17:4.73:5,0,126	0/0:16,0:14:26.90:0,27,791	0/0:17,0:12:11.23:0,11,576	1/1:11,8:18:3.68:131,4,0	0/0:14,0:15:32.48:0,32,1265	0/0:16,0:16:42.14:0,42,1695	0/0:13,0:13:8.42:0,8,343	0/0:17,0:15:8.09:0,8,69	0/0:11,0:11:18.06:0,18,559	0/0:15,0:14:12.59:0,13,213	0/0:13,0:13:3.92:0,4,174	0/0:14,0:13:14.71:0,15,356	0/0:29,0:30:49.39:0,49,2775	0/0:12,0:13:27.09:0,27,1325	0/0:21,0:17:38.78:0,39,1307	0/0:13,0:14:26.35:0,26,1231	0/0:14,0:13:24.55:0,25,1170	0/1:14,0:14:1.22:1,0,333	0/1:22,0:20:0.90:1,0,39	0/0:5,0:3:0:0,0,0	0/0:15,0:15:9.53:0,10,167	0/0:18,0:17:39.13:0,39,1318	0/0:12,0:12:29.24:0,29,812	0/0:9,0:4:12.04:0,12,658
chr10	24582726	.	GTGTGTGTA	G	1955.52	PASS	AB=0.978;AC=24;AF=0.444;AN=54;BaseQRankSum=3.992;DP=347;FS=17.575;HRun=0;HaplotypeScore=152.6532;InbreedingCoeff=-0.2380;MQ=39.34;MQ0=17;MQRankSum=-1.919;QD=6.67;ReadPosRankSum=0.427;VQSLOD=1.0907;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:3,0:2:0:0,0,0	0/1:6,0:6:6.87:41,0,7	0/0:2,0:1:2.98:0,3,21	./.	0/1:21,1:20:62.63:84,0,63	0/1:20,0:19:6.07:135,0,6	1/1:15,1:13:9.59:98,10,0	0/0:10,0:9:17.89:0,18,160	0/1:17,0:17:4.77:5,0,187	0/1:14,0:14:45.68:98,0,46	0/1:16,0:16:66.74:67,0,95	0/1:13,0:11:38.34:61,0,38	1/1:8,0:8:7.76:193,8,0	1/1:13,0:12:8.72:51,9,0	0/1:10,0:10:6.42:42,0,6	0/1:7,1:7:0.95:84,0,1	0/1:22,0:21:46.79:47,0,144	0/1:16,0:15:97.39:97,0,128	0/0:9,0:8:22.16:0,22,150	0/0:13,0:13:6.05:0,6,265	0/0:10,0:9:5.59:0,6,91	1/1:13,0:13:6.22:167,6,0	0/1:20,2:21:18.38:85,0,18	0/0:5,0:4:0:0,0,0	0/1:16,0:16:44.30:97,0,44	0/1:20,1:19:44.54:262,0,45	0/1:13,1:13:20.96:375,0,21	0/1:6,0:4:18.20:18,0,100
chr10	24582728	.	GTGTGTA	G	1878.20	PASS	AB=0.977;AC=24;AF=0.444;AN=54;BaseQRankSum=3.415;DP=343;FS=9.062;HRun=0;HaplotypeScore=143.1894;InbreedingCoeff=-0.4257;MQ=39.57;MQ0=15;MQRankSum=-1.348;QD=6.28;ReadPosRankSum=2.169;VQSLOD=1.5658;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:3,0:2:0:0,0,0	0/1:6,0:6:31.05:38,0,31	0/0:2,0:1:2.98:0,3,21	./.	0/1:21,1:20:75.22:80,0,75	0/1:20,0:19:10.18:118,0,10	1/1:16,0:13:5.80:76,6,0	0/0:9,0:8:14.93:0,15,139	0/1:16,1:17:42.76:43,0,86	0/1:13,0:13:58.98:141,0,59	0/1:15,0:15:35.55:74,0,36	0/1:12,1:11:34.10:34,0,38	1/1:8,0:8:5.88:125,6,0	1/1:13,0:12:7.49:55,7,0	0/1:9,1:10:8.21:33,0,8	0/1:8,0:7:1.84:72,0,2	0/1:21,0:21:83.45:140,0,83	0/1:15,0:14:95.91:101,0,96	0/0:9,0:8:2.66:0,3,63	0/0:13,0:13:4.12:0,4,140	0/1:9,0:9:8.97:9,0,57	0/1:13,0:13:6.72:156,0,7	0/1:22,0:21:44.23:77,0,44	0/0:6,0:5:0:0,0,0	0/1:13,3:16:18.54:111,0,19	0/1:21,0:19:23.48:192,0,23	0/1:15,0:14:12.25:326,0,12	0/1:6,0:4:20.19:20,0,82
chr10	24582730	.	GTGTA	G	1932.09	PASS	AB=0.984;AC=26;AF=0.464;AN=56;BaseQRankSum=2.286;DP=343;FS=5.620;HRun=0;HaplotypeScore=132.4809;InbreedingCoeff=-0.4798;MQ=42.04;MQ0=15;MQRankSum=-0.172;QD=6.04;ReadPosRankSum=2.542;VQSLOD=2.3818;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:3,0:2:0:0,0,0	0/1:6,0:6:35.03:60,0,35	0/0:2,0:1:2.98:0,3,21	0/0:3,0:1:2.68:0,3,11	0/1:22,0:20:77.62:80,0,78	0/1:20,1:20:8:126,0,8	1/1:18,0:15:8.51:95,9,0	0/0:9,0:8:14.89:0,15,118	0/1:16,1:17:81.13:83,0,81	0/1:13,0:13:38.85:83,0,39	0/1:15,0:15:34.61:72,0,35	0/1:12,1:11:18.47:18,0,39	1/1:8,0:8:13.82:83,14,0	1/1:12,1:12:6.83:80,7,0	0/1:10,0:10:7.12:32,0,7	0/1:8,0:7:1.29:64,0,1	0/1:20,0:20:40.82:222,0,41	0/1:14,0:13:60.79:68,0,61	0/1:8,0:7:35.24:35,0,36	0/1:13,0:13:36.71:37,0,96	0/1:8,0:8:34.81:56,0,35	0/1:13,0:13:6.79:176,0,7	0/1:21,1:21:46.88:77,0,47	0/0:5,1:5:0:0,0,0	0/1:16,0:16:18.82:111,0,19	0/1:20,1:19:41.33:145,0,41	0/1:14,1:14:9.37:257,0,9	0/1:6,0:4:19.20:19,0,54
chr10	24582732	.	GTA	G	1359.29	PASS	AB=0.961;AC=26;AF=0.464;AN=56;BaseQRankSum=2.257;DP=343;FS=6.419;HRun=0;HaplotypeScore=131.4809;InbreedingCoeff=-0.4370;MQ=44.50;MQ0=12;MQRankSum=1.993;QD=4.37;ReadPosRankSum=1.851;VQSLOD=2.5179;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:2,0:2:0:0,0,0	0/1:5,1:6:29.05:71,0,29	0/0:2,0:1:2.98:0,3,21	0/0:4,0:3:1.72:0,2,20	0/1:21,2:21:45.66:88,0,46	0/1:21,0:20:10.12:126,0,10	1/1:18,0:15:7.21:66,7,0	0/0:10,0:9:0.54:0,1,83	0/1:16,0:16:3.46:3,0,86	0/1:13,0:13:47.39:60,0,47	0/1:14,1:15:17.80:82,0,18	0/1:13,0:11:11.27:11,0,38	0/1:8,0:8:1.99:29,0,2	1/1:10,4:13:9.97:97,10,0	0/1:9,1:10:6.35:19,0,6	0/1:6,1:6:1.14:72,0,1	0/1:20,0:20:74.35:101,0,74	0/1:12,0:12:36.54:37,0,76	0/1:8,0:7:18.28:18,0,67	0/0:13,0:13:3.73:0,4,110	0/1:7,0:7:13.22:13,0,44	0/1:12,1:13:1.18:126,0,1	0/1:21,1:21:35.07:49,0,35	1/1:7,0:6:2.94:18,3,0	0/1:15,2:17:10.39:79,0,10	0/1:21,0:19:51.68:126,0,52	0/1:14,1:14:4.62:185,0,5	0/1:5,0:4:22.59:23,0,25
chr10	24582734	.	A	AAGAGAG	4703.46	PASS	AB=0.933;AC=38;AF=0.704;AN=54;BaseQRankSum=3.038;DP=367;FS=13.240;HRun=0;HaplotypeScore=148.1015;InbreedingCoeff=0.6343;MQ=44.02;MQ0=12;MQRankSum=-3.791;QD=16.56;ReadPosRankSum=-2.650;VQSLOD=3.4126;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	1/1:4,2:6:9.03:204,9,0	0/0:2,0:1:2.80:0,3,13	0/1:6,0:4:12.77:13,0,20	1/1:19,6:24:17.45:307,17,0	1/1:18,2:20:11.92:369,12,0	1/1:16,3:16:9.50:214,10,0	1/1:13,0:11:15:224,15,0	0/0:17,0:17:18.06:0,18,361	1/1:13,2:15:20.24:464,20,0	1/1:13,2:16:6.13:239,6,0	0/1:11,2:11:0:0,0,0	1/1:7,0:8:9.03:131,9,0	1/1:13,0:13:12.02:236,12,0	1/1:10,2:12:7.90:195,8,0	1/1:6,1:6:5.05:97,5,0	0/0:19,0:20:21.04:0,21,375	0/0:11,0:11:15.05:0,15,292	0/0:10,0:9:3.01:0,3,42	0/0:12,0:13:27.09:0,27,540	0/0:6,0:6:9.03:0,9,186	1/1:9,3:14:17.60:411,18,0	1/1:20,4:23:6.94:181,7,0	1/1:9,0:8:6.49:114,6,0	1/1:13,5:18:14.70:318,15,0	1/1:17,3:19:1.26:383,1,0	1/1:11,3:15:10.59:485,11,0	1/1:5,1:5:6.02:118,6,0
chr10	24582790	.	TA	T	8970.43	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=10.650;DP=397;FS=25.554;HRun=4;HaplotypeScore=83.3874;InbreedingCoeff=0.9914;MQ=86.22;MQ0=0;MQRankSum=-7.574;QD=32.04;ReadPosRankSum=2.995;VQSLOD=3.0121;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,8:8:18.06:216,18,0	1/1:1,6:7:18.06:216,18,0	0/0:20,0:20:57.19:0,57,786	0/0:15,0:13:39.06:0,39,500	1/1:0,22:22:63.19:755,63,0	1/1:0,13:13:33.10:396,33,0	1/1:1,22:23:54.17:647,54,0	1/1:3,20:23:60.18:718,60,0	0/0:14,0:14:36.12:0,36,503	1/1:0,18:18:51.14:598,51,0	1/1:1,15:16:44.99:503,45,0	1/1:0,9:9:27.08:323,27,0	1/1:1,12:13:33.10:395,33,0	1/1:0,8:8:21.06:251,21,0	1/1:0,16:16:45.07:521,45,0	1/1:0,5:5:15.05:180,15,0	0/0:17,0:17:44.86:0,45,609	0/0:13,0:13:39.13:0,39,546	0/0:13,0:13:36.12:0,36,502	0/0:18,0:18:54.18:0,54,755	0/0:7,0:7:21.07:0,21,294	1/1:1,14:15:36.11:432,36,0	1/1:0,21:21:60.18:717,60,0	1/1:0,11:11:33.03:377,33,0	1/1:2,12:14:33.10:396,33,0	1/1:0,21:21:63.19:755,63,0	1/1:0,11:11:30.09:359,30,0	1/1:0,6:6:18.06:215,18,0
chr10	24583056	.	A	AT	14515.80	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=-4.259;DP=541;FS=0.397;HRun=4;HaplotypeScore=61.9076;InbreedingCoeff=0.9964;MQ=78.15;MQ0=0;MQRankSum=-4.267;QD=34.56;ReadPosRankSum=1.693;VQSLOD=5.3920;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,18:19:48.16:651,48,0	1/1:0,8:8:21.07:275,21,0	0/0:16,0:16:27.10:0,27,387	0/0:9,0:9:15.87:0,16,184	1/1:2,26:28:75.24:994,75,0	1/1:1,22:23:63.21:862,63,0	1/1:0,10:10:30.10:410,30,0	1/1:1,20:21:60.19:805,60,0	1/1:2,19:21:51.17:698,51,0	1/1:2,19:21:54.18:734,54,0	1/1:1,22:23:66.17:859,66,0	1/1:1,16:17:39.13:533,39,0	1/1:2,19:21:48.16:656,48,0	1/1:2,16:18:45.13:598,45,0	1/1:1,12:13:33.11:452,33,0	1/1:3,26:29:69.19:924,69,0	0/0:18,0:18:54.15:0,54,612	0/0:11,0:11:33.09:0,33,374	0/0:21,0:21:60.17:0,60,681	0/0:20,0:20:54.14:0,54,603	0/0:26,0:26:69.20:0,69,782	1/1:2,18:20:49.67:640,50,0	1/1:2,19:21:42.14:574,42,0	1/1:1,15:16:39.13:534,39,0	1/1:0,19:19:48.16:650,48,0	1/1:2,18:20:54.18:738,54,0	1/1:0,35:35:99:1395,102,0	1/1:0,17:17:39.13:533,39,0
chr10	24583188	.	C	CA	11401.01	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=7.601;DP=573;FS=6.313;HRun=9;HaplotypeScore=98.3255;InbreedingCoeff=0.9604;MQ=81.52;MQ0=0;MQRankSum=-0.403;QD=26.95;ReadPosRankSum=0.900;VQSLOD=4.2696;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,15:17:48.13:530,48,0	1/1:0,5:5:15.04:166,15,0	0/0:17,0:16:20.15:0,20,196	0/0:19,0:21:4.01:0,4,115	1/1:10,27:37:93.24:1017,93,0	1/1:6,22:29:72.02:770,72,0	1/1:2,13:15:33.09:365,33,0	1/1:2,19:21:57.12:613,57,0	1/1:4,20:25:66.13:710,66,0	1/1:3,15:18:45.11:490,45,0	1/1:3,16:20:50.97:545,51,0	1/1:3,8:11:27.06:292,27,0	1/1:4,6:10:18.05:199,18,0	1/1:3,18:21:54.15:597,54,0	1/1:1,11:11:30.08:332,30,0	1/1:3,19:22:51.10:551,51,0	0/0:18,0:18:44.98:0,45,390	0/0:22,0:21:59.94:0,60,515	0/0:21,0:21:56.98:0,57,495	0/0:43,0:43:98.47:0,98,1014	0/0:8,0:8:11.99:0,12,104	1/1:6,16:22:25.08:505,25,0	1/1:1,20:21:63.17:696,63,0	1/1:3,22:25:60.16:664,60,0	1/1:3,16:20:47.96:509,48,0	1/1:2,20:22:63.16:689,63,0	1/1:7,29:35:81.04:896,81,0	1/1:5,9:14:24.06:265,24,0
chr10	24584154	.	A	AC	1177.47	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.460;DP=404;FS=1.480;HRun=3;HaplotypeScore=40.6626;InbreedingCoeff=0.6995;MQ=68.70;MQ0=0;MQRankSum=-1.915;QD=36.80;ReadPosRankSum=-3.699;VQSLOD=2.3345;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:49.57:0,50,282	0/0:11,0:11:30.09:0,30,360	0/0:6,0:5:9.03:0,9,104	0/0:4,0:4:2.97:0,3,25	0/0:14,0:14:39.12:0,39,468	0/0:21,0:21:57.17:0,57,684	0/0:6,0:6:18.06:0,18,216	1/1:1,31:32:96.29:1272,96,0	0/0:12,0:12:36.11:0,36,432	0/0:15,0:15:45.14:0,45,539	0/0:20,0:20:57.17:0,57,684	0/0:7,0:7:18.06:0,18,216	0/0:5,0:5:15.05:0,15,180	0/0:14,0:14:39.12:0,39,468	0/0:13,0:13:33.10:0,33,396	0/0:9,0:9:27.07:0,27,313	0/0:21,0:21:60.18:0,60,720	0/0:13,0:13:36.11:0,36,432	0/0:19,0:19:54.17:0,54,648	0/0:30,0:30:87.25:0,87,1033	0/0:4,0:4:12.04:0,12,144	0/0:5,0:5:15.05:0,15,180	0/0:23,0:23:69.21:0,69,823	0/0:2,0:2:6.02:0,6,72	0/0:17,0:17:39.12:0,39,468	0/0:22,0:22:63.19:0,63,756	0/0:25,0:25:72.19:0,72,841	0/0:16,0:16:48.10:0,48,540
chr10	24584202	.	A	AT	546.75	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.264;DP=386;FS=4.893;HRun=6;HaplotypeScore=40.6632;InbreedingCoeff=0.6436;MQ=73.37;MQ0=0;MQRankSum=-5.129;QD=32.16;ReadPosRankSum=-2.615;VQSLOD=2.9165;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:57.09:0,57,570	0/0:11,0:11:27.06:0,27,275	0/0:8,0:8:17.97:0,18,167	0/0:5,0:5:2.97:0,3,21	0/0:22,0:22:66.15:0,66,673	0/0:20,0:20:54.11:0,54,546	0/0:7,0:7:21.05:0,21,214	1/1:0,17:17:51.16:641,51,0	0/0:13,0:13:39.09:0,39,397	0/0:19,0:19:57.12:0,57,577	0/0:23,0:23:57.09:0,57,572	0/0:6,0:6:15.01:0,15,146	0/0:8,0:8:21.05:0,21,214	0/0:20,0:20:51.11:0,51,520	0/0:13,0:12:39.07:0,39,390	0/0:6,0:6:15.01:0,15,142	0/0:19,0:19:54.12:0,54,550	0/0:13,0:13:30.04:0,30,298	0/0:21,0:21:57.11:0,57,575	0/0:23,0:23:54.10:0,54,544	0/0:5,0:5:12.02:0,12,122	0/0:2,0:2:6.01:0,6,61	0/0:18,0:18:54.12:0,54,550	0/0:1,0:1:3.01:0,3,31	0/0:13,0:13:33.07:0,33,337	0/0:15,0:15:39.08:0,39,394	0/0:21,0:21:57.09:0,57,567	0/0:15,0:15:45.10:0,45,459
chr10	24584761	.	G	GA	1194.36	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=4.303;DP=654;FS=0.546;HRun=5;HaplotypeScore=97.2394;InbreedingCoeff=0.9976;MQ=73.08;MQ0=0;MQRankSum=-2.553;QD=21.72;ReadPosRankSum=-1.687;VQSLOD=2.1608;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,29:31:75.24:987,75,0	0/0:7,0:7:21.05:0,21,226	0/0:29,0:27:54.05:0,54,626	0/0:30,0:29:44.47:0,44,559	0/0:32,0:32:87.22:0,87,934	0/0:25,0:25:66.16:0,66,709	0/0:19,0:19:51.12:0,51,545	1/1:2,1:24:61.31:329,61,0	0/0:21,0:21:60.15:0,60,645	0/0:21,0:21:57.14:0,57,613	0/0:15,0:15:39.08:0,39,411	0/0:26,0:26:72.18:0,72,774	0/0:25,0:25:69.11:0,69,713	0/0:23,0:23:60.15:0,60,645	0/0:26,0:26:72.18:0,72,773	0/0:23,0:23:63.14:0,63,668	0/0:26,0:26:65.36:0,65,754	0/0:15,0:15:42.11:0,42,451	0/0:30,0:30:78.16:0,78,822	0/0:18,0:18:51.13:0,51,548	0/0:22,0:22:63.16:0,63,677	0/0:31,0:31:84.21:0,84,902	0/0:18,0:18:45.11:0,45,484	0/0:21,0:21:54.09:0,54,568	0/0:24,0:24:60.12:0,60,635	0/0:23,0:23:69.17:0,69,742	0/0:38,0:38:99:0,108,1160	0/0:10,0:10:30.08:0,30,322
chr10	24585225	.	C	CA	1452.55	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.084;DP=684;FS=3.790;HRun=6;HaplotypeScore=69.8519;InbreedingCoeff=0.9978;MQ=91.03;MQ0=0;MQRankSum=-5.149;QD=30.91;ReadPosRankSum=0.646;VQSLOD=4.3330;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,42:47:99:1547,123,0	0/0:10,0:10:27.06:0,27,275	0/0:30,0:30:84.16:0,84,839	0/0:28,0:28:63.11:0,63,627	0/0:33,0:33:87.19:0,87,888	0/0:21,0:21:63.14:0,63,643	0/0:14,0:14:39.09:0,39,398	0/0:33,0:33:87.18:0,87,882	0/0:20,0:20:57.13:0,57,582	0/0:27,0:27:69.15:0,69,704	0/0:22,0:22:51.11:0,51,520	0/0:20,0:20:54.12:0,54,551	0/0:15,0:15:42.08:0,42,421	0/0:27,0:27:78.16:0,78,789	0/0:21,0:21:63.14:0,63,643	0/0:16,0:16:39.08:0,39,398	0/0:25,0:25:57.13:0,57,582	0/0:13,0:13:27.06:0,27,275	0/0:26,0:26:66.15:0,66,673	0/0:22,0:21:66.15:0,66,673	0/0:30,0:30:81.16:0,81,819	0/0:33,0:33:93.15:0,93,930	0/0:22,0:22:57.09:0,57,565	0/0:24,0:24:66.15:0,66,673	0/0:19,0:19:54.12:0,54,551	0/0:33,0:33:84.17:0,84,851	0/0:31,0:31:84.17:0,84,849	0/0:22,0:22:66.15:0,66,673
chr10	24585701	.	TC	T	1122.39	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=7.482;DP=543;FS=0.000;HRun=3;HaplotypeScore=50.6005;InbreedingCoeff=0.7293;MQ=56.63;MQ0=7;MQRankSum=3.118;QD=26.10;ReadPosRankSum=1.648;VQSLOD=2.8707;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,32:35:87.29:1217,87,0	0/0:12,0:12:29.93:0,30,436	0/0:8,0:4:9.03:0,9,129	0/1:7,0:3:1.41:1,0,84	0/0:24,0:24:72.25:0,72,1141	0/0:19,0:18:54.17:0,54,830	0/0:21,0:20:57.19:0,57,892	0/0:22,0:19:51.17:0,51,796	0/0:13,0:13:36.12:0,36,567	0/0:18,0:18:54.14:0,54,835	0/0:16,0:16:45.15:0,45,718	0/0:26,0:25:75.24:0,75,1167	0/0:11,0:11:33.11:0,33,510	0/0:24,0:23:69.24:0,69,1103	0/0:24,0:24:72.25:0,72,1142	0/0:12,0:12:33.10:0,33,503	0/0:23,0:23:69.24:0,69,1097	0/0:14,0:14:42.14:0,42,671	0/0:23,0:19:57.16:0,57,878	0/0:14,0:14:42.14:0,42,658	0/0:30,0:30:86.33:0,86,1372	0/0:15,0:14:42.14:0,42,671	0/0:24,0:24:72.24:0,72,1133	0/0:15,0:15:45.14:0,45,695	0/0:24,0:24:69.24:0,69,1102	0/0:28,0:28:84.28:0,84,1322	0/0:27,0:26:81.28:0,81,1291	0/0:13,0:13:36.10:0,36,549
chr10	24589422	.	TTTG	T	136.53	PASS	AB=0.667;AC=1;AF=0.018;AN=56;BaseQRankSum=5.082;DP=570;FS=7.350;HRun=0;HaplotypeScore=81.7393;InbreedingCoeff=-0.0186;MQ=66.72;MQ0=0;MQRankSum=-4.997;QD=7.58;ReadPosRankSum=-0.628;VQSLOD=1.8457;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:72.25:0,72,1624	0/0:8,0:8:21.06:0,21,452	0/0:29,0:29:72.22:0,72,1571	0/0:13,0:13:35.71:0,36,772	0/0:23,0:23:63.17:0,63,1432	0/0:23,0:23:69.20:0,69,1503	0/0:8,0:8:21.07:0,21,463	0/1:9,9:18:82.52:211,0,83	0/0:20,0:20:48.16:0,48,1098	0/0:32,0:32:96.28:0,96,2130	0/0:25,0:25:63.22:0,63,1372	0/0:14,0:14:39.13:0,39,923	0/0:14,0:14:42.14:0,42,964	0/0:22,0:22:63.20:0,63,1438	0/0:18,0:18:51.17:0,51,1148	0/0:13,0:13:39.13:0,39,917	0/0:14,0:13:24.08:0,24,568	0/0:23,0:23:57.20:0,57,1339	0/0:24,0:22:66.22:0,66,1452	0/0:26,0:26:78.24:0,78,1695	0/0:12,0:11:30.09:0,30,632	0/0:18,0:18:48.05:0,48,892	0/0:26,0:26:60.21:0,60,1389	0/0:20,0:20:39.61:0,40,906	0/0:26,0:26:75.26:0,75,1743	0/0:25,0:25:72.25:0,72,1627	0/0:31,0:31:87.30:0,87,2014	0/0:15,0:15:45.15:0,45,977
chr10	24589427	.	CT	C	45.20	PASS	AB=0.591;AC=1;AF=0.018;AN=56;BaseQRankSum=5.369;DP=562;FS=7.306;HRun=1;HaplotypeScore=56.6277;InbreedingCoeff=-0.0187;MQ=63.51;MQ0=5;MQRankSum=-5.091;QD=3.48;ReadPosRankSum=-1.152;VQSLOD=-0.5563;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:72.23:0,72,1126	0/0:7,0:7:18.06:0,18,288	0/0:23,0:23:66.22:0,66,1033	0/0:11,0:11:33.11:0,33,517	0/0:25,0:24:60.20:0,60,958	0/0:22,0:22:63.21:0,63,1007	0/0:9,0:9:21.07:0,21,335	0/1:4,9:13:59.60:120,0,60	0/0:21,0:21:48.16:0,48,767	0/0:34,0:32:96.32:0,96,1512	0/0:27,0:26:57.13:0,57,858	0/0:14,0:14:39.13:0,39,624	0/0:14,0:14:42.13:0,42,648	0/0:21,0:21:60.20:0,60,956	0/0:16,0:16:45.15:0,45,720	0/0:13,0:13:39.13:0,39,624	0/0:14,0:13:24.08:0,24,384	0/0:25,0:24:57.19:0,57,911	0/0:25,0:23:69.22:0,69,1071	0/0:24,0:24:72.23:0,72,1125	0/0:11,0:10:27.08:0,27,409	0/0:19,0:17:39.11:0,39,577	0/0:28,0:26:60.19:0,60,936	0/0:20,0:20:38.25:0,38,621	0/0:26,0:26:72.25:0,72,1151	0/0:26,0:26:75.24:0,75,1175	0/0:30,0:30:87.28:0,87,1367	0/0:15,0:15:45.09:0,45,644
chr10	24590079	.	TA	T	576.12	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.191;DP=671;FS=10.578;HRun=1;HaplotypeScore=60.1387;InbreedingCoeff=0.9545;MQ=53.51;MQ0=8;MQRankSum=-5.170;QD=22.16;ReadPosRankSum=-3.517;VQSLOD=1.8462;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:37:93.32:0,93,1484	0/0:12,0:12:36.12:0,36,575	0/0:16,0:5:15.04:0,15,219	0/0:17,0:5:12.01:0,12,192	0/0:41,0:41:99:0,117,1836	0/0:24,0:23:57.18:0,57,884	0/0:17,0:17:48.16:0,48,766	1/1:1,25:19:51.15:671,51,0	0/0:24,0:24:72.23:0,72,1123	0/0:39,0:38:99:0,114,1822	0/0:21,0:21:60.20:0,60,954	0/0:17,0:17:45.15:0,45,719	0/0:15,0:15:42.14:0,42,668	0/0:23,0:23:63.20:0,63,982	0/0:20,0:20:60.20:0,60,958	0/0:18,0:18:42.14:0,42,671	0/0:21,0:21:57.15:0,57,882	0/0:18,0:18:54.18:0,54,846	0/0:16,0:10:30.09:0,30,456	0/0:45,0:45:99:0,132,2015	0/0:17,0:17:51.17:0,51,809	0/0:19,0:19:57.19:0,57,911	0/0:31,0:31:90.14:0,90,1347	0/0:25,0:25:66.21:0,66,1030	0/0:25,0:25:72.25:0,72,1148	0/0:37,0:37:99:0,108,1698	0/0:32,0:30:90.31:0,90,1438	0/0:14,0:13:33.11:0,33,527
chr10	24590282	.	TC	T	137.79	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.272;DP=654;FS=1.525;HRun=1;HaplotypeScore=66.7508;InbreedingCoeff=0.8202;MQ=48.19;MQ0=50;MQRankSum=-3.187;QD=13.78;ReadPosRankSum=-0.878;VQSLOD=2.5040;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,7:8:18.02:228,18,0	0/0:11,0:9:27.02:0,27,383	0/0:18,0:4:9.03:0,9,137	0/0:17,0:3:9.03:0,9,138	0/0:31,0:30:51.06:0,51,703	0/0:30,0:28:54.18:0,54,826	0/0:15,0:12:20.99:0,21,271	0/0:34,0:16:45.08:0,45,631	0/0:11,0:11:30.10:0,30,458	0/0:35,0:31:93.31:0,93,1390	0/0:28,0:26:39.12:0,39,579	0/0:24,0:22:39.12:0,39,573	0/0:17,0:14:33.11:0,33,503	0/0:22,0:21:45.11:0,45,659	0/0:21,0:19:39.06:0,39,546	0/0:26,0:25:72.24:0,72,1101	0/0:33,0:32:72.13:0,72,1008	0/0:25,0:21:54.13:0,54,798	0/0:22,0:12:36.12:0,36,551	0/0:32,0:31:93.26:0,93,1396	0/0:22,0:20:57.11:0,57,840	0/0:24,0:23:54.14:0,54,780	0/0:23,0:22:45.11:0,45,653	0/0:19,0:17:7.31:0,7,403	0/0:16,0:15:30.10:0,30,459	0/0:41,0:38:99:0,114,1708	0/0:26,0:24:60.14:0,60,862	0/0:21,0:17:27.01:0,27,304
chr10	24592629	.	AACATTAT	A	1890.88	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.422;DP=669;FS=3.748;HRun=0;HaplotypeScore=191.0793;InbreedingCoeff=0.9981;MQ=70.57;MQ0=3;MQRankSum=-6.599;QD=65.20;ReadPosRankSum=-2.939;VQSLOD=3.2430;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,114,4232	0/0:14,0:14:42.14:0,42,1559	0/0:28,0:25:64.80:0,65,2434	0/0:23,0:19:48.16:0,48,1793	0/0:36,0:36:99:0,102,4022	0/0:33,0:33:93.32:0,93,3635	0/0:13,0:13:36.12:0,36,1434	1/1:2,27:29:78.26:1986,78,0	0/0:15,0:15:45.15:0,45,1818	0/0:36,0:36:99:0,105,4070	0/0:24,0:24:69.22:0,69,2489	0/0:19,0:19:51.18:0,51,2060	0/0:13,0:13:36.12:0,36,1407	0/0:20,0:20:57.20:0,57,2119	0/0:12,0:12:30.10:0,30,1211	0/0:17,0:17:45.15:0,45,1599	0/0:10,0:10:27.09:0,27,1022	0/0:17,0:17:48.16:0,48,1736	0/0:25,0:25:69.24:0,69,2740	0/0:36,0:36:99:0,105,4144	0/0:17,0:17:48.16:0,48,1897	0/0:25,0:25:75.24:0,75,2848	0/0:35,0:35:96.28:0,96,3635	0/0:15,0:15:42.14:0,42,1678	0/0:40,0:40:99:0,105,3784	0/0:34,0:33:99:0,102,4094	0/0:26,0:26:75.24:0,75,2895	0/0:17,0:16:45.15:0,45,1410
chr10	24593106	.	C	CA	640.16	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-1.291;DP=561;FS=2.838;HRun=7;HaplotypeScore=61.4490;InbreedingCoeff=0.8927;MQ=80.59;MQ0=0;MQRankSum=-1.630;QD=21.34;ReadPosRankSum=-3.972;VQSLOD=2.1354;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:33.05:0,33,319	0/0:10,0:10:24.03:0,24,232	0/0:14,0:14:19.45:0,19,205	0/0:15,0:15:31.59:0,32,289	0/0:42,0:42:99:0,114,1101	0/0:24,0:24:69.09:0,69,660	0/0:15,0:15:36.05:0,36,348	1/1:10,20:30:63.14:735,63,0	0/0:22,0:22:63.10:0,63,608	0/0:31,0:31:81.12:0,81,782	0/0:27,0:27:72.11:0,72,695	0/0:12,0:12:36.06:0,36,348	0/0:18,0:18:48.08:0,48,464	0/0:8,0:8:21.03:0,21,203	0/0:11,0:11:33.05:0,33,318	0/0:11,0:11:27.04:0,27,261	0/0:25,0:25:66.10:0,66,637	0/0:3,0:3:6:0,6,58	0/0:26,0:26:69.10:0,69,663	0/0:31,0:31:87.14:0,87,840	0/0:16,0:16:48.08:0,48,463	0/0:23,0:23:57.09:0,57,550	0/0:33,0:32:81.12:0,81,781	0/0:16,0:16:48.06:0,48,456	0/0:26,0:26:63.09:0,63,608	0/0:26,0:26:72.12:0,72,695	0/0:26,0:26:75.12:0,75,724	0/0:9,0:9:27.04:0,27,261
chr10	24593140	.	AT	A	614.17	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=0.697;DP=521;FS=10.496;HRun=6;HaplotypeScore=66.6193;InbreedingCoeff=0.9748;MQ=79.34;MQ0=0;MQRankSum=-0.897;QD=23.62;ReadPosRankSum=-3.839;VQSLOD=1.3262;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:42.09:0,42,507	0/0:6,0:6:15.05:0,15,197	0/0:13,0:12:31.28:0,31,330	0/0:17,0:17:41.70:0,42,468	0/0:28,0:28:81.24:0,81,1037	0/0:23,0:23:69.22:0,69,905	0/0:13,0:13:39.11:0,39,499	1/1:8,18:26:69.13:709,69,0	0/0:18,0:18:45.15:0,45,592	0/0:29,0:29:75.23:0,75,970	0/0:27,0:27:81.26:0,81,1063	0/0:11,0:11:33.10:0,33,421	0/0:15,0:15:42.13:0,42,540	0/0:9,0:9:27.07:0,27,339	0/0:12,0:12:33.09:0,33,418	0/0:16,0:16:45.13:0,45,578	0/0:23,0:23:63.20:0,63,829	0/0:6,0:6:18.06:0,18,236	0/0:22,0:22:57.19:0,57,748	0/0:24,0:24:54.15:0,54,693	0/0:15,0:15:45.13:0,45,576	0/0:20,0:20:57.19:0,57,750	0/0:26,0:26:78.25:0,78,1020	0/0:19,0:19:51.15:0,51,655	0/0:22,0:22:66.20:0,66,854	0/0:25,0:25:72.22:0,72,922	0/0:24,0:24:65.92:0,66,809	0/0:18,0:18:54.15:0,54,694
chr10	24594198	.	GA	G	5027.45	PASS	AB=0.776;AC=38;AF=0.679;AN=56;BaseQRankSum=3.565;DP=437;FS=0.000;HRun=10;HaplotypeScore=60.7411;InbreedingCoeff=0.8593;MQ=83.53;MQ0=1;MQRankSum=1.067;QD=18.69;ReadPosRankSum=6.531;VQSLOD=4.8783;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:22:44.48:0,44,250	1/1:0,8:8:24:208,24,0	0/0:31,1:27:40.78:0,41,368	0/1:19,1:12:22.02:22,0,98	1/1:4,16:20:44.98:390,45,0	1/1:2,7:9:20.99:182,21,0	1/1:0,8:8:21:182,21,0	0/0:25,1:26:38.66:0,39,689	1/1:2,15:17:44.79:377,45,0	1/1:3,22:25:68.94:591,69,0	0/1:6,12:18:0.22:227,0,0	1/1:0,10:10:29.99:260,30,0	1/1:1,13:14:23.91:208,24,0	1/1:0,11:11:26.99:234,27,0	1/1:2,6:8:17.99:156,18,0	1/1:0,6:6:15:130,15,0	0/0:23,0:23:60.04:0,60,638	0/0:15,1:16:13.05:0,13,370	0/0:22,0:22:57.13:0,57,611	0/0:17,0:17:35.18:0,35,383	0/0:10,0:10:27.06:0,27,291	1/1:0,12:12:29.99:260,30,0	1/1:5,12:17:23.05:274,23,0	1/1:0,5:5:12:104,12,0	1/1:3,9:12:28.80:239,29,0	1/1:4,17:22:55.77:460,56,0	1/1:1,13:14:32.99:286,33,0	1/1:4,9:13:26.98:234,27,0
chr10	24594426	.	GA	G	532.27	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.459;DP=486;FS=0.000;HRun=5;HaplotypeScore=63.4277;InbreedingCoeff=0.9536;MQ=78.03;MQ0=0;MQRankSum=0.037;QD=25.35;ReadPosRankSum=-4.360;VQSLOD=1.1635;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:42.14:0,42,567	0/0:4,0:4:12.03:0,12,149	0/0:22,0:22:48.15:0,48,643	0/0:16,0:16:42.14:0,42,567	0/0:22,0:22:60.20:0,60,809	0/0:16,0:16:42.14:0,42,574	0/0:9,0:9:21.07:0,21,287	1/1:2,19:21:57.13:627,57,0	0/0:18,0:18:54.16:0,54,710	0/0:26,0:26:75.24:0,75,1032	0/0:30,0:30:84.28:0,84,1148	0/0:14,0:14:36.12:0,36,492	0/0:11,0:11:30.10:0,30,410	0/0:16,0:16:42.14:0,42,574	0/0:12,0:12:30.10:0,30,410	0/0:14,0:14:39.13:0,39,534	0/0:21,1:22:51.17:0,51,697	0/0:18,0:18:48.12:0,48,635	0/0:24,0:24:69.19:0,69,929	0/0:31,0:31:87.28:0,87,1174	0/0:13,0:13:36.12:0,36,492	0/0:8,0:8:24.07:0,24,306	0/0:22,0:22:63.21:0,63,861	0/0:11,0:11:24.07:0,24,313	0/0:12,0:12:33.11:0,33,452	0/0:23,0:23:63.21:0,63,875	0/0:29,0:29:78.25:0,78,1050	0/0:6,0:6:18.02:0,18,225
chr10	24594466	.	G	GATAAA	13438.20	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=-7.627;DP=451;FS=4.128;HRun=0;HaplotypeScore=81.2946;InbreedingCoeff=0.8896;MQ=78.69;MQ0=2;MQRankSum=-0.494;QD=40.72;ReadPosRankSum=-0.163;VQSLOD=4.3532;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:11:17.34:219,17,0	1/1:2,3:6:9.03:260,9,0	0/0:16,0:15:2.62:0,3,94	0/0:11,0:11:13.62:0,14,170	1/1:6,16:21:42.14:1183,42,0	1/1:4,14:22:42.14:1162,42,0	1/1:7,4:11:16.35:437,16,0	1/1:32,0:28:18.06:325,18,0	1/1:7,6:13:21.07:594,21,0	1/1:13,12:26:48.16:1206,48,0	1/1:13,11:24:33.11:890,33,0	1/1:7,4:11:12.04:299,12,0	1/1:7,4:12:15.05:361,15,0	1/1:9,7:16:27.09:730,27,0	1/1:3,4:7:9.03:260,9,0	1/1:5,7:12:15.05:433,15,0	0/0:17,0:17:33.11:0,33,621	0/0:18,0:18:27.09:0,27,509	0/0:23,0:23:42.14:0,42,786	0/0:22,0:22:51.17:0,51,952	0/0:13,0:13:36.12:0,36,675	1/1:2,4:6:9.03:260,9,0	1/1:7,9:17:24.06:693,24,0	1/1:6,2:8:6.02:173,6,0	1/1:4,12:17:36.12:1039,36,0	1/1:4,16:20:51.15:1384,51,0	1/1:15,17:32:45.15:1250,45,0	1/1:2,3:5:12.01:280,12,0
chr10	24594958	.	A	ATT	685.61	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=0.122;DP=513;FS=6.461;HRun=2;HaplotypeScore=63.1831;InbreedingCoeff=0.9949;MQ=58.86;MQ0=2;MQRankSum=-4.249;QD=36.08;ReadPosRankSum=-3.074;VQSLOD=2.6068;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:1,18:19:51.04:780,51,0	0/0:11,0:11:33.10:0,33,467	0/0:25,0:12:36.12:0,36,504	0/0:20,0:20:51.15:0,51,695	0/0:29,0:28:81.22:0,81,1132	0/0:21,0:21:54.18:0,54,790	0/0:17,0:17:48.16:0,48,707	0/0:24,0:24:72.22:0,72,1008	0/0:12,0:12:36.11:0,36,510	0/0:19,0:18:51.11:0,51,707	0/0:23,0:23:69.23:0,69,1016	0/0:13,0:13:39.13:0,39,574	0/0:13,0:13:33.11:0,33,484	0/0:16,0:16:48.16:0,48,705	0/0:22,0:22:63.21:0,63,926	0/0:12,0:12:36.12:0,36,530	0/0:23,0:23:66.22:0,66,971	0/0:11,0:11:30.08:0,30,420	0/0:14,0:13:39.11:0,39,538	0/0:30,0:30:81.26:0,81,1174	0/0:12,0:12:30.10:0,30,442	0/0:18,0:18:48.14:0,48,686	0/0:26,0:26:78.26:0,78,1134	0/0:11,0:11:27.05:0,27,372	0/0:18,0:18:51.17:0,51,750	0/0:24,0:24:72.24:0,72,1061	0/0:22,0:22:63.18:0,63,888	0/0:8,0:8:24.08:0,24,353
chr10	24595008	.	T	TG	463.20	PASS	AB=0.941;AC=7;AF=0.125;AN=56;BaseQRankSum=-1.840;DP=484;FS=10.615;HRun=8;HaplotypeScore=49.6251;InbreedingCoeff=0.8593;MQ=81.29;MQ0=0;MQRankSum=-1.829;QD=9.86;ReadPosRankSum=-1.038;VQSLOD=0.5082;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:33.01:0,33,302	1/1:3,5:8:18.05:206,18,0	0/0:28,0:28:66.01:0,66,598	0/1:15,1:16:5.67:6,0,192	0/0:34,0:34:93.02:0,93,846	0/0:17,0:17:45.02:0,45,412	0/0:20,0:20:57.02:0,57,522	1/1:5,1:12:17.36:103,17,0	0/0:13,0:13:33:0,33,297	0/0:17,0:17:45.02:0,45,409	0/0:19,0:19:51.02:0,51,466	0/0:14,0:14:39.02:0,39,357	0/0:13,0:13:38.99:0,39,347	0/0:20,0:20:44.99:0,45,401	0/0:23,0:23:57.03:0,57,522	1/1:2,8:11:26.91:291,27,0	0/0:16,0:16:45.02:0,45,412	0/0:11,0:11:27.01:0,27,247	0/0:13,0:13:27.01:0,27,247	0/0:25,0:25:57.01:0,57,522	0/0:11,0:11:30.01:0,30,274	0/0:17,0:17:45.02:0,45,412	0/0:30,0:30:87.03:0,87,791	0/0:12,0:12:33.02:0,33,302	0/0:20,0:20:57.03:0,57,522	0/0:22,0:22:51.02:0,51,467	0/0:22,0:22:60.03:0,60,549	0/0:7,0:7:21.01:0,21,192
chr10	24595142	.	AACTT	A	896.80	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.252;DP=593;FS=0.909;HRun=0;HaplotypeScore=97.8714;InbreedingCoeff=0.9918;MQ=76.20;MQ0=0;MQRankSum=-4.149;QD=38.99;ReadPosRankSum=-4.242;VQSLOD=2.7380;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:69.24:0,69,1880	0/0:6,0:6:18.06:0,18,493	0/0:21,0:21:48.66:0,49,1215	0/0:21,0:21:63.08:0,63,1367	0/0:26,0:26:72.21:0,72,1911	0/0:27,0:27:81.28:0,81,2137	0/0:21,0:21:60.21:0,60,1552	1/1:5,18:23:54.17:992,54,0	0/0:19,0:19:54.19:0,54,1444	0/0:16,0:16:42.14:0,42,1142	0/0:28,0:28:84.29:0,84,2252	0/0:13,0:13:39.13:0,39,1056	0/0:13,0:13:39.13:0,39,1038	0/0:24,0:24:69.24:0,69,1818	0/0:23,0:23:66.23:0,66,1776	0/0:14,0:14:42.14:0,42,1099	0/0:24,0:24:72.25:0,72,1904	0/0:22,0:22:63.22:0,63,1659	0/0:16,0:16:38.22:0,38,1067	0/0:37,0:37:99:0,111,3032	0/0:34,0:34:99:0,102,2764	0/0:22,0:22:63.22:0,63,1726	0/0:21,0:21:60.21:0,60,1610	0/0:24,0:24:69.24:0,69,1886	0/0:16,0:16:45.15:0,45,1233	0/0:20,0:20:57.18:0,57,1481	0/0:21,0:21:60.19:0,60,1569	0/0:14,0:14:42.14:0,42,1136
chr10	24595289	.	TA	T	482.30	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=7.388;DP=528;FS=5.765;HRun=10;HaplotypeScore=53.6889;InbreedingCoeff=0.6524;MQ=64.17;MQ0=0;MQRankSum=-2.194;QD=12.69;ReadPosRankSum=-0.629;VQSLOD=2.9352;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,22:25:67.54:577,68,0	0/0:17,0:17:45.12:0,45,498	0/1:13,0:10:1.99:2,0,92	0/0:13,0:11:20.85:0,21,210	0/0:27,0:27:75.17:0,75,812	0/0:27,0:27:72.19:0,72,796	0/0:8,0:8:20.92:0,21,215	0/0:21,0:20:45.11:0,45,490	0/0:20,0:20:57.15:0,57,623	0/0:19,0:19:51.13:0,51,557	0/0:22,0:22:57.15:0,57,631	0/0:12,0:12:30.08:0,30,332	0/0:13,0:13:30.07:0,30,324	0/0:19,0:19:45.12:0,45,498	0/0:26,1:27:43.13:0,43,704	0/0:12,1:13:7.03:0,7,306	0/0:14,0:14:27.06:0,27,290	0/0:14,0:14:36.07:0,36,386	0/0:15,0:15:36.10:0,36,398	0/0:27,0:28:72:0,72,760	0/0:14,0:14:33.09:0,33,365	0/0:24,0:25:59.71:0,60,603	0/0:35,3:38:30.25:0,30,993	0/0:3,0:3:9.02:0,9,100	0/0:23,2:25:20.08:0,20,678	0/0:22,0:22:57.15:0,57,630	0/0:28,0:28:72.19:0,72,796	0/0:6,0:6:11.98:0,12,123
chr10	24597582	.	C	CA	276.48	PASS	AB=0.933;AC=5;AF=0.096;AN=52;BaseQRankSum=4.706;DP=651;FS=19.204;HRun=4;HaplotypeScore=48.9111;InbreedingCoeff=0.7583;MQ=46.89;MQ0=45;MQRankSum=-4.972;QD=8.13;ReadPosRankSum=-1.425;VQSLOD=-0.5126;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,10:9:12.04:191,12,0	0/0:12,0:11:21.07:0,21,293	./.	./.	0/0:47,0:44:99:0,99,1374	0/0:21,0:20:51.16:0,51,689	0/0:23,0:22:60.20:0,60,838	1/1:1,9:4:12.04:191,12,0	0/0:27,0:26:60.20:0,60,834	0/0:38,0:30:90.28:0,90,1240	0/0:20,0:19:42.14:0,42,584	0/0:12,0:12:33.11:0,33,456	0/0:16,0:16:42.14:0,42,586	0/0:22,0:22:54.16:0,54,732	0/0:23,0:22:54.18:0,54,753	0/0:15,0:15:39.13:0,39,545	0/0:25,0:25:57.19:0,57,788	0/1:13,1:14:11.25:11,0,385	0/0:25,0:17:51.17:0,51,712	0/0:27,0:24:51.17:0,51,705	0/0:34,0:34:96.30:0,96,1310	0/0:24,0:22:54.18:0,54,742	0/0:20,0:19:48.16:0,48,665	0/0:24,0:22:51.16:0,51,696	0/0:21,0:20:48.16:0,48,670	0/0:25,0:23:69.23:0,69,954	0/0:34,0:33:84.28:0,84,1161	0/0:10,0:10:30.10:0,30,419
chr10	24599250	.	C	CA	981.52	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-5.637;DP=555;FS=3.365;HRun=6;HaplotypeScore=57.9063;InbreedingCoeff=0.9402;MQ=63.57;MQ0=0;MQRankSum=0.402;QD=27.26;ReadPosRankSum=0.690;VQSLOD=4.1164;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,34:36:88.12:1076,88,0	0/0:4,0:4:9.02:0,9,92	0/0:26,0:22:34.61:0,35,484	0/0:25,0:23:31.88:0,32,480	0/0:32,0:32:75.06:0,75,736	0/0:26,0:26:66.15:0,66,673	0/0:16,0:16:45.04:0,45,442	0/0:19,0:19:54.11:0,54,544	0/0:16,0:16:45.10:0,45,459	0/0:24,0:24:63.12:0,63,635	0/0:22,0:22:57.11:0,57,575	0/0:13,0:13:36.08:0,36,366	0/0:18,0:18:54.12:0,54,551	0/0:21,0:21:60.14:0,60,612	0/0:23,0:23:66.15:0,66,673	0/0:19,0:19:54.12:0,54,550	0/0:14,0:14:42.10:0,42,428	0/0:15,0:15:42.10:0,42,428	0/0:26,0:26:78.16:0,78,788	0/0:17,0:17:45.10:0,45,458	0/0:18,0:18:54.12:0,54,551	0/0:20,0:20:45.10:0,45,459	0/0:23,0:23:54.10:0,54,542	0/0:13,0:13:36.08:0,36,367	0/0:20,0:20:29.33:0,29,497	0/0:20,0:20:54.10:0,54,544	0/0:22,0:22:66.15:0,66,673	0/0:7,0:7:21.05:0,21,214
chr10	24599890	.	T	TA	997.08	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-5.730;DP=409;FS=38.520;HRun=9;HaplotypeScore=40.2625;InbreedingCoeff=0.9079;MQ=63.84;MQ0=0;MQRankSum=0.256;QD=20.35;ReadPosRankSum=-0.928;VQSLOD=1.3337;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,25:28:69.19:763,69,0	0/0:6,0:6:12:0,12,104	0/0:7,0:7:8.99:0,9,78	0/0:13,0:11:26.98:0,27,232	0/0:18,0:18:50.98:0,51,440	0/0:15,0:15:35.98:0,36,312	0/0:13,0:13:26.99:0,27,234	1/1:9,12:21:33.07:355,33,0	0/0:22,0:22:56.98:0,57,495	0/0:19,0:19:47.97:0,48,413	0/0:19,0:19:56.99:0,57,495	0/0:8,0:8:14.99:0,15,130	0/0:13,0:13:32.98:0,33,283	0/0:14,0:14:35.94:0,36,305	0/0:5,0:5:12:0,12,104	0/0:5,0:5:15:0,15,130	0/0:17,0:17:47.93:0,48,406	0/0:10,0:10:23.99:0,24,208	0/0:15,0:15:41.98:0,42,363	0/0:15,0:15:38.98:0,39,339	0/0:28,0:28:68.81:0,69,583	0/0:16,0:16:29.48:0,29,259	0/0:22,0:22:53.98:0,54,466	0/0:9,0:9:20.90:0,21,173	0/0:15,0:15:35.96:0,36,307	0/0:16,0:16:35.98:0,36,309	0/0:16,0:16:44.99:0,45,390	0/0:4,0:4:12:0,12,104
chr10	24600013	.	GA	G	920.22	PASS	AB=0.600;AC=29;AF=0.906;AN=32;BaseQRankSum=-1.093;DP=77;FS=10.414;HRun=2;HaplotypeScore=19.7370;InbreedingCoeff=0.1584;MQ=54.81;MQ0=0;MQRankSum=-0.304;QD=16.73;ReadPosRankSum=-0.971;VQSLOD=1.9161;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,2:3:3.01:32,3,0	./.	1/1:1,1:1:3:26,3,0	0/0:4,0:4:4.12:0,4,19	./.	1/1:1,3:4:9.03:109,9,0	1/1:0,9:9:9.03:111,9,0	1/1:0,2:2:6:59,6,0	1/1:0,6:6:15:166,15,0	1/1:1,2:2:6.02:72,6,0	1/1:1,4:5:9.03:109,9,0	1/1:0,2:2:5.98:57,6,0	1/1:0,3:3:6.02:73,6,0	1/1:1,2:3:0.89:2,1,0	./.	./.	./.	0/1:1,2:3:7.46:63,0,7	1/1:1,3:4:6.02:74,6,0	./.	./.	1/1:0,2:2:3.01:36,3,0	./.	./.	./.	./.	1/1:3,1:4:2.98:22,3,0	./.
chr10	24601518	.	TTAAGTAAGTAAG	T	4288.51	PASS	AC=42;AF=0.840;AN=50;BaseQRankSum=0.687;DP=280;FS=18.338;HRun=0;HaplotypeScore=104.9944;InbreedingCoeff=0.4266;MQ=68.07;MQ0=2;MQRankSum=-1.405;QD=20.04;ReadPosRankSum=-0.091;VQSLOD=2.0956;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:14:12.04:301,12,0	1/1:2,3:5:6.02:178,6,0	0/0:15,0:13:6:0,6,56	./.	1/1:10,9:19:21.07:432,21,0	1/1:5,3:8:3.01:73,3,0	1/1:4,0:4:3.01:89,3,0	0/0:14,0:14:3:0,3,28	1/1:7,8:15:12.04:366,12,0	1/1:6,14:20:29.74:727,30,0	1/1:5,7:12:14.96:220,15,0	1/1:4,2:6:2.92:17,3,0	1/1:6,5:11:2.97:88,3,0	1/1:4,1:5:3.01:69,3,0	1/1:4,3:7:9.03:229,9,0	1/1:1,2:3:3.01:102,3,0	1/1:3,0:3:1.55:4,2,0	./.	1/1:6,0:7:1.55:4,2,0	0/0:1,0:9:0.43:0,0,65	0/0:15,0:15:17.95:0,18,202	1/1:3,6:9:8.95:186,9,0	1/1:5,5:10:2.84:67,3,0	1/1:7,0:7:8.02:133,8,0	1/1:5,1:15:11.16:155,11,0	1/1:6,10:16:27.02:749,27,0	1/1:9,7:15:1.49:100,1,0	./.
chr10	24601539	.	TAAGTAAGTAAGTAAG	T	820.64	PASS	AB=1.000;AC=10;AF=0.179;AN=56;BaseQRankSum=7.583;DP=261;FS=5.790;HRun=0;HaplotypeScore=112.6966;InbreedingCoeff=-0.0511;MQ=54.58;MQ0=4;MQRankSum=-5.343;QD=8.13;ReadPosRankSum=5.595;VQSLOD=1.2829;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:0,18:18:18.06:613,18,0	0/1:4,0:4:23.88:24,0,32	0/0:9,0:5:14.94:0,15,259	0/0:7,0:3:9.03:0,9,117	0/0:17,0:17:26.37:0,26,477	0/0:8,0:8:15.50:0,16,248	0/0:5,0:5:0.29:0,0,165	0/0:11,0:11:33.11:0,33,589	0/1:12,0:12:50.58:51,0,119	0/1:20,0:20:89.62:90,0,356	0/0:8,0:8:22.13:0,22,322	0/0:3,0:3:6.02:0,6,90	0/1:6,0:6:5.14:5,0,69	0/0:5,0:5:13.86:0,14,185	0/0:6,0:6:0.71:0,1,108	0/1:3,0:3:22.68:23,0,33	0/0:7,0:6:18.06:0,18,302	0/0:2,0:1:3.01:0,3,63	0/0:12,0:10:30.05:0,30,370	0/0:11,0:11:30.10:0,30,599	0/0:12,0:12:36.12:0,36,761	0/1:9,0:9:8.52:9,0,231	0/0:11,0:11:19.89:0,20,323	0/0:7,0:7:6.57:0,7,242	0/0:18,0:18:37.89:0,38,609	0/1:17,0:17:99:139,0,413	0/1:12,0:11:7.57:8,0,217	0/0:1,0:1:3:0,3,26
chr10	24602329	.	TA	T	466.62	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.550;DP=537;FS=6.194;HRun=10;HaplotypeScore=56.4147;InbreedingCoeff=0.9231;MQ=59.68;MQ0=0;MQRankSum=-1.492;QD=10.61;ReadPosRankSum=-0.622;VQSLOD=2.2534;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,15:23:32.06:390,32,0	0/0:7,0:7:18.05:0,18,199	0/0:14,1:12:24.06:0,24,256	0/0:9,1:9:15.04:0,15,165	0/0:30,0:30:69.15:0,69,738	0/0:18,0:18:48.12:0,48,522	0/0:6,0:6:18.05:0,18,199	1/1:8,13:21:8.46:190,8,0	0/0:23,0:23:60.14:0,60,650	0/0:20,0:20:48.13:0,48,531	0/0:15,1:16:10.03:0,10,330	0/0:8,0:8:24.06:0,24,265	0/0:18,0:18:45.10:0,45,487	0/0:18,0:18:51.14:0,51,564	0/0:20,0:20:54.11:0,54,574	0/0:12,0:12:33.09:0,33,365	0/0:10,0:10:27.07:0,27,299	0/0:22,0:24:54.45:0,54,588	0/0:27,0:26:53.70:0,54,618	0/0:30,1:31:41.61:0,42,642	0/0:27,0:27:72.58:0,73,757	0/0:23,0:23:63.17:0,63,697	0/0:25,0:25:50.97:0,51,544	0/0:16,0:16:39.09:0,39,423	0/0:14,0:14:36.10:0,36,398	0/0:34,1:34:90.23:0,90,987	0/0:29,0:29:72.13:0,72,765	0/0:11,0:11:33.07:0,33,355
chr10	24602436	.	CA	C	1340.95	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=10.583;DP=582;FS=8.728;HRun=7;HaplotypeScore=65.3797;InbreedingCoeff=0.9912;MQ=70.87;MQ0=0;MQRankSum=-1.852;QD=23.12;ReadPosRankSum=-1.184;VQSLOD=2.8624;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,30:34:86.68:865,87,0	0/0:5,0:5:15.04:0,15,177	0/0:27,0:27:69.14:0,69,811	0/0:18,0:17:47.73:0,48,575	0/0:23,0:23:63.19:0,63,780	0/0:25,0:25:69.22:0,69,867	0/0:12,0:12:33.09:0,33,402	1/1:3,21:24:60.10:598,60,0	0/0:24,0:24:66.19:0,66,806	0/0:24,0:24:63.18:0,63,760	0/0:33,0:33:90.27:0,90,1112	0/0:11,0:11:30.97:0,31,367	0/0:18,0:18:54.17:0,54,679	0/0:22,0:22:63.18:0,63,762	0/0:19,0:19:54.17:0,54,679	0/0:13,0:13:33.10:0,33,404	0/0:28,0:28:78.25:0,78,981	0/0:15,0:15:33.08:0,33,400	0/0:26,0:26:69.21:0,69,857	0/0:23,0:23:57.13:0,57,665	0/0:19,0:19:48.15:0,48,603	0/0:22,0:22:57.14:0,57,689	0/0:28,0:28:72.20:0,72,866	0/0:17,0:17:48.15:0,48,604	0/0:14,0:14:42.13:0,42,527	0/0:18,0:18:51.16:0,51,630	0/0:24,0:23:66.21:0,66,830	0/0:16,0:16:42.13:0,42,528
chr10	24602926	.	TTA	T	206.45	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.849;DP=290;FS=2.172;HRun=0;HaplotypeScore=44.5477;InbreedingCoeff=0.7532;MQ=60.77;MQ0=1;MQRankSum=0.114;QD=29.49;ReadPosRankSum=0.576;VQSLOD=4.1923;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,7:7:21.07:298,21,0	0/0:4,0:4:9.02:0,9,155	0/0:3,0:3:5.93:0,6,56	0/0:7,0:4:7.69:0,8,104	0/0:13,0:13:39.04:0,39,610	0/0:9,0:9:27.08:0,27,440	0/0:7,0:7:21:0,21,329	0/0:18,0:18:42.09:0,42,682	0/0:13,0:13:36.11:0,36,622	0/0:12,0:12:36.02:0,36,530	0/0:13,0:13:30.08:0,30,518	0/0:6,0:6:15.05:0,15,259	0/0:10,0:10:30.09:0,30,492	0/0:7,0:7:21:0,21,329	0/0:11,0:11:30.08:0,30,477	0/0:10,0:10:30.07:0,30,464	0/0:7,0:7:21.07:0,21,363	0/0:14,0:14:39.13:0,39,674	0/0:14,0:13:39.07:0,39,563	0/0:18,0:18:54.09:0,54,829	0/0:25,0:25:75.24:0,75,1257	0/0:12,0:12:30.10:0,30,517	0/0:11,0:11:29.94:0,30,450	0/0:10,0:10:24.07:0,24,414	0/0:4,0:4:12.04:0,12,207	0/0:10,0:10:27.07:0,27,423	0/0:7,0:7:21.03:0,21,331	0/0:8,0:7:21.07:0,21,342
chr10	24610298	.	T	TA	10275.29	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-13.303;DP=580;FS=0.000;HRun=8;HaplotypeScore=51.9504;InbreedingCoeff=0.9973;MQ=58.75;MQ0=2;MQRankSum=2.428;QD=26.01;ReadPosRankSum=-0.295;VQSLOD=5.1810;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:34:96.05:0,96,878	1/1:1,8:9:24.07:277,24,0	0/0:18,0:13:35:0,35,297	0/0:14,0:12:30:0,30,268	1/1:4,16:21:23.48:491,23,0	1/1:3,20:22:51.15:589,51,0	1/1:2,10:12:30.09:346,30,0	1/1:8,26:32:75.17:826,75,0	1/1:2,18:19:48.14:554,48,0	1/1:4,19:23:57.14:639,57,0	1/1:3,22:25:32.63:600,33,0	1/1:0,15:15:42.12:485,42,0	1/1:6,20:25:57.17:657,57,0	1/1:2,9:11:24.07:277,24,0	1/1:0,20:20:54.16:623,54,0	1/1:1,17:19:44.97:499,45,0	0/0:40,0:39:99:0,113,1010	0/0:22,1:23:22.41:0,22,459	0/0:22,0:22:57.01:0,57,516	0/0:16,0:16:42.02:0,42,383	0/0:16,0:16:45.02:0,45,412	1/1:1,24:25:66.15:747,66,0	1/1:1,11:12:30.09:346,30,0	1/1:1,11:12:30.09:343,30,0	1/1:0,19:19:51.15:589,51,0	1/1:4,19:22:54.15:614,54,0	1/1:7,18:27:43.87:532,44,0	1/1:0,7:7:21.06:242,21,0
chr10	24610505	.	G	GT	1098.37	PASS	AB=0.991;AC=29;AF=0.518;AN=56;BaseQRankSum=-0.497;DP=308;FS=99.547;HRun=1;HaplotypeScore=65.1071;InbreedingCoeff=0.2923;MQ=72.59;MQ0=2;MQRankSum=0.402;QD=5.04;ReadPosRankSum=3.130;VQSLOD=-0.6240;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:12:4.09:35,4,0	0/1:5,0:5:8.84:27,0,9	0/0:17,0:11:29.95:0,30,358	0/0:19,0:12:12.60:0,13,100	0/1:16,0:16:8.93:91,0,9	0/1:9,0:10:4.97:5,0,12	1/1:14,1:17:25.81:162,26,0	0/0:8,0:8:0.50:0,0,24	1/1:21,2:23:23.72:157,24,0	0/1:10,0:10:9.78:29,0,10	1/1:9,0:9:5.01:48,5,0	0/1:4,0:4:6.15:8,0,6	1/1:8,1:9:2.98:71,3,0	1/1:10,1:11:17.72:120,18,0	0/1:20,0:20:9.57:100,0,10	0/0:7,0:7:7.02:0,7,21	0/0:16,0:16:39.08:0,39,475	0/0:3,0:3:8.96:0,9,96	0/0:5,0:5:8.81:0,9,75	0/0:5,0:5:15.03:0,15,173	0/0:8,0:8:18.05:0,18,214	0/1:10,1:11:17.57:53,0,18	0/1:10,0:10:3.67:17,0,4	0/1:16,0:16:5.85:21,0,6	1/1:7,0:7:11.91:92,12,0	1/1:8,0:8:6.72:48,7,0	1/1:16,1:18:25.37:173,25,0	1/1:2,0:2:2.98:22,3,0
chr10	24610506	.	CGGGG	C	541.39	PASS	AB=0.950;AC=11;AF=0.196;AN=56;BaseQRankSum=-4.972;DP=323;FS=3.365;HRun=15;HaplotypeScore=72.6001;InbreedingCoeff=0.6032;MQ=73.44;MQ0=3;MQRankSum=-1.159;QD=9.67;ReadPosRankSum=2.800;VQSLOD=-0.5222;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:12.04:0,12,179	0/0:5,0:5:15.05:0,15,246	0/1:17,0:10:18.46:18,0,91	0/0:22,0:14:29.74:0,30,385	0/0:19,0:19:35.49:0,35,536	0/0:11,0:11:21.48:0,21,291	0/0:18,0:18:37.48:0,37,574	0/0:8,0:8:3.01:0,3,46	0/0:23,0:23:30.09:0,30,487	0/0:10,0:10:12.04:0,12,192	0/0:9,0:9:5.71:0,6,109	0/0:5,0:5:6.02:0,6,113	0/0:9,0:9:15.05:0,15,272	0/0:10,0:10:15.05:0,15,253	0/0:21,0:21:24.08:0,24,420	0/0:7,0:7:9.03:0,9,167	1/1:3,11:16:33.02:415,33,0	1/1:0,2:3:5.95:64,6,0	1/1:0,4:4:5.97:81,6,0	1/1:2,2:5:8.98:105,9,0	1/1:8,0:9:1.10:3,1,0	0/0:11,0:11:24.08:0,24,413	0/0:10,0:10:6.02:0,6,102	0/0:16,0:16:18.06:0,18,315	0/0:6,0:6:9.03:0,9,158	0/0:10,0:10:15.01:0,15,201	0/0:19,0:19:30.09:0,30,476	0/0:3,0:3:3.01:0,3,51
chr10	24610516	.	G	GC	2639.91	PASS	AB=0.697;AC=38;AF=0.679;AN=56;BaseQRankSum=-2.322;DP=352;FS=46.594;HRun=0;HaplotypeScore=55.7073;InbreedingCoeff=0.5581;MQ=72.00;MQ0=4;MQRankSum=2.096;QD=10.91;ReadPosRankSum=4.664;VQSLOD=1.9188;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:3,0:18:3.93:64,0,4	1/1:2,3:5:7.21:122,7,0	0/0:26,0:13:19.37:0,19,162	0/0:26,0:14:17.90:0,18,191	1/1:3,15:18:20.55:216,21,0	1/1:10,0:10:15.55:191,16,0	1/1:3,22:25:33.42:401,33,0	1/1:5,0:5:2.84:18,3,0	1/1:4,16:21:11.63:273,12,0	1/1:1,5:7:11.47:72,11,0	1/1:2,6:8:8.97:74,9,0	0/1:2,2:4:26.02:28,0,26	1/1:2,6:10:8.49:115,8,0	1/1:1,12:14:15.04:172,15,0	0/1:4,9:15:35.29:149,0,35	0/1:4,0:4:2.93:70,0,3	0/0:21,0:21:52.86:0,53,339	0/0:10,0:10:29.71:0,30,222	0/0:8,0:8:14.78:0,15,103	0/0:9,0:9:20.69:0,21,147	0/0:10,0:10:20.91:0,21,169	1/1:7,2:9:9.04:144,9,0	1/1:1,7:8:5.79:67,6,0	1/1:3,15:18:5.34:114,5,0	1/1:1,8:10:9.02:92,9,0	1/1:2,6:8:7.12:104,7,0	1/1:3,15:19:10.60:311,11,0	1/1:0,5:5:3.01:34,3,0
chr10	24611028	.	AG	A	1470.23	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=10.359;DP=645;FS=11.845;HRun=2;HaplotypeScore=66.7541;InbreedingCoeff=0.9702;MQ=76.64;MQ0=0;MQRankSum=-1.985;QD=26.73;ReadPosRankSum=1.478;VQSLOD=2.1027;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,51:55:99:1565,138,0	0/0:18,0:18:54.18:0,54,808	0/0:33,0:32:78.21:0,78,1193	0/0:30,0:25:68.95:0,69,889	0/0:16,0:16:45.13:0,45,647	0/0:16,0:16:48.14:0,48,679	0/0:21,0:21:60.20:0,60,899	0/0:25,0:25:75.25:0,75,1106	0/0:19,0:19:57.19:0,57,852	0/0:28,0:28:81.26:0,81,1178	0/0:19,0:19:57.18:0,57,834	0/0:19,0:19:57.19:0,57,853	0/0:18,0:18:54.18:0,54,806	0/0:18,0:18:54.18:0,54,808	0/0:19,0:19:57.19:0,57,838	0/0:21,0:21:63.17:0,63,899	0/0:28,0:28:81.27:0,81,1212	0/0:17,0:17:51.17:0,51,763	0/0:18,0:18:54.14:0,54,745	0/0:13,0:13:39.13:0,39,584	0/0:49,0:49:99:0,138,2048	0/0:25,0:25:75.24:0,75,1103	0/0:15,0:15:45.15:0,45,673	0/0:31,0:31:93.22:0,93,1298	0/0:17,0:17:51.16:0,51,744	0/0:31,0:31:90.30:0,90,1348	0/0:22,0:22:63.21:0,63,939	0/0:4,0:4:12.04:0,12,180
chr10	24611297	.	G	GT	3554.84	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-10.180;DP=472;FS=2.626;HRun=1;HaplotypeScore=45.8894;InbreedingCoeff=0.9956;MQ=80.89;MQ0=0;MQRankSum=-1.237;QD=39.50;ReadPosRankSum=-0.559;VQSLOD=3.7252;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,102,1266	0/0:9,0:9:23.93:0,24,272	0/0:21,0:21:49.45:0,49,668	0/0:24,0:24:62.14:0,62,834	0/0:9,0:9:23.78:0,24,281	0/0:19,0:19:51.13:0,51,631	0/0:10,0:10:30.10:0,30,389	0/0:34,0:34:99:0,99,1247	0/0:25,0:25:72.21:0,72,917	0/0:21,0:21:63.20:0,63,816	0/0:14,0:14:39.03:0,39,468	0/0:13,0:13:33.11:0,33,428	0/0:9,0:9:24.06:0,24,296	0/0:17,0:17:51.16:0,51,653	0/0:13,0:13:39.13:0,39,506	0/0:15,0:15:45.15:0,45,584	1/1:0,18:18:51.17:763,51,0	1/1:1,13:14:18.20:518,18,0	1/1:1,17:18:54.11:714,54,0	1/1:0,25:25:72.14:1021,72,0	1/1:1,14:15:36.12:539,36,0	0/0:12,0:12:30.10:0,30,389	0/0:18,0:18:51.17:0,51,658	0/0:11,0:11:30.10:0,30,389	0/0:10,0:10:30.10:0,30,389	0/0:18,0:18:54.16:0,54,686	0/0:18,0:18:54.18:0,54,699	0/0:8,0:8:24.06:0,24,296
chr10	24612297	.	C	CTTTG	15398.31	PASS	AB=0.631;AC=38;AF=0.679;AN=56;BaseQRankSum=2.827;DP=589;FS=6.451;HRun=0;HaplotypeScore=137.7247;InbreedingCoeff=0.8072;MQ=68.09;MQ0=2;MQRankSum=-9.655;QD=38.59;ReadPosRankSum=1.591;VQSLOD=5.1682;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,8:16:21.07:463,21,0	1/1:3,8:11:18.06:433,18,0	0/0:24,0:21:12.04:0,12,193	0/0:23,0:20:15.04:0,15,221	0/1:14,17:31:34.63:1094,0,35	1/1:14,20:34:45.15:1083,45,0	1/1:0,5:5:12.04:272,12,0	0/0:37,0:37:54.14:0,54,798	1/1:10,12:22:33.11:794,33,0	1/1:9,23:33:72.25:1716,72,0	1/1:11,15:27:36.12:811,36,0	1/1:10,7:17:24.08:545,24,0	1/1:10,12:24:39.13:921,39,0	1/1:9,9:20:21.07:505,21,0	1/1:4,11:16:30.10:722,30,0	1/1:7,9:17:27.09:650,27,0	0/0:19,0:19:35.61:0,36,542	0/0:13,0:13:18.04:0,18,256	0/0:21,0:21:36.11:0,36,559	0/0:32,0:33:72.23:0,72,1122	0/0:20,0:20:39.12:0,39,606	1/1:6,9:15:24.08:578,24,0	1/1:5,18:22:45.15:1058,45,0	1/1:3,5:8:12.04:289,12,0	1/1:6,7:13:21.07:504,21,0	1/1:10,17:28:11.73:1301,12,0	0/1:11,17:29:33.73:1298,0,34	1/1:5,5:10:15.05:361,15,0
chr10	24613911	.	A	AGTGTGT	3016.57	PASS	AB=0.817;AC=36;AF=0.692;AN=52;BaseQRankSum=-1.982;DP=549;FS=5.269;HRun=0;HaplotypeScore=129.1584;InbreedingCoeff=0.4082;MQ=56.40;MQ0=21;MQRankSum=-3.224;QD=8.50;ReadPosRankSum=-1.386;VQSLOD=1.8443;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:18:6.02:0,6,84	1/1:3,3:7:5.09:164,5,0	./.	./.	0/1:13,0:19:28.39:32,0,28	1/1:11,8:24:9.03:224,9,0	0/0:18,5:24:0.88:0,1,2	1/1:24,0:24:2.13:53,2,0	1/1:11,7:20:8.25:173,8,0	1/1:11,3:17:15.22:381,15,0	1/1:17,0:17:5.88:67,6,0	1/1:9,6:15:5.69:182,6,0	1/1:5,5:14:3.01:95,3,0	1/1:14,0:14:6.02:165,6,0	1/1:9,5:17:5.56:151,6,0	1/1:8,2:18:17.85:335,18,0	0/0:16,0:19:26.33:0,26,411	0/1:12,0:12:8.44:8,0,186	0/0:19,0:18:9:0,9,110	0/0:22,0:25:27.09:0,27,482	0/0:31,0:32:30.08:0,30,573	1/1:12,7:24:2.53:94,3,0	0/1:11,5:17:0:0,0,0	1/1:14,1:15:8.95:188,9,0	1/1:12,1:22:9.50:180,10,0	0/1:20,0:30:15.18:424,0,15	1/1:12,7:22:6.80:165,7,0	1/1:3,1:5:3.01:96,3,0
chr10	24614330	.	G	GTCTA	11201.33	PASS	AB=0.875;AC=39;AF=0.722;AN=54;BaseQRankSum=-8.674;DP=585;FS=1.869;HRun=0;HaplotypeScore=114.0972;InbreedingCoeff=0.6010;MQ=67.04;MQ0=2;MQRankSum=0.735;QD=24.78;ReadPosRankSum=-1.214;VQSLOD=4.7063;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:19:9.03:156,9,0	1/1:11,2:13:15:215,15,0	0/0:24,0:21:3:0,3,29	./.	1/1:11,23:36:4.41:954,4,0	1/1:7,11:20:24.08:568,24,0	1/1:8,8:16:15.05:352,15,0	0/1:35,0:35:4.56:5,0,95	1/1:7,13:20:27.09:625,27,0	1/1:17,14:31:42.14:952,42,0	1/1:10,4:33:36.30:471,36,0	1/1:4,5:11:12.04:284,12,0	1/1:4,11:16:27.09:638,27,0	1/1:5,11:16:27.09:640,27,0	0/0:18,0:18:36.11:0,36,541	1/1:6,15:22:36.12:853,36,0	0/0:11,0:12:6.01:0,6,56	0/1:5,0:10:29.86:30,0,122	0/0:18,0:27:20.33:0,20,192	0/0:5,0:28:49.01:0,49,520	0/0:2,0:9:15.02:0,15,140	1/1:5,22:27:48.16:1137,48,0	0/1:10,15:25:18.68:541,0,19	1/1:0,5:5:6.02:142,6,0	1/1:11,0:20:12.04:204,12,0	1/1:10,15:25:1.79:965,2,0	1/1:10,14:28:32.54:774,33,0	1/1:13,10:22:30.10:696,30,0
chr10	24616068	.	C	CA	12197.93	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-12.726;DP=607;FS=5.299;HRun=6;HaplotypeScore=52.4871;InbreedingCoeff=0.9981;MQ=56.80;MQ0=14;MQRankSum=5.009;QD=32.10;ReadPosRankSum=3.531;VQSLOD=5.1803;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,22:25:51.10:622,51,0	1/1:1,11:12:30.09:365,30,0	0/0:36,0:14:27.03:0,27,263	0/0:23,0:11:23.87:0,24,232	1/1:1,39:40:99:1361,111,0	1/1:1,16:17:51.16:638,51,0	1/1:1,7:8:21.07:264,21,0	0/0:36,0:35:93.19:0,93,942	1/1:2,16:18:45.14:566,45,0	1/1:7,21:28:66.13:809,66,0	1/1:0,20:20:60.19:755,60,0	1/1:0,13:13:39.12:491,39,0	1/1:1,17:18:51.16:640,51,0	1/1:2,16:18:45.14:564,45,0	1/1:0,11:11:33.11:415,33,0	1/1:1,18:19:45.14:566,45,0	0/0:28,0:27:78.17:0,78,795	0/0:43,0:43:99:0,117,1193	0/0:21,0:18:51.10:0,51,514	0/0:30,0:30:87.20:0,87,888	0/0:9,0:9:27.05:0,27,269	1/1:2,14:16:42.13:519,42,0	1/1:2,22:24:60.19:755,60,0	1/1:1,16:17:42.13:528,42,0	1/1:1,14:15:42.13:528,42,0	1/1:2,19:21:57.18:717,57,0	1/1:3,26:30:63.20:792,63,0	1/1:0,9:9:24.08:302,24,0
chr10	24617751	.	C	CA	589.90	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-3.085;DP=498;FS=5.855;HRun=7;HaplotypeScore=45.2055;InbreedingCoeff=0.7911;MQ=57.69;MQ0=16;MQRankSum=1.713;QD=26.81;ReadPosRankSum=-0.608;VQSLOD=3.9011;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,19:22:57.17:685,57,0	0/0:8,0:8:18.03:0,18,174	0/0:15,0:4:3:0,3,29	0/0:18,0:9:20.89:0,21,184	0/0:32,0:32:78.12:0,78,753	0/0:20,0:20:60.08:0,60,574	0/0:6,0:6:18.01:0,18,168	0/0:24,0:19:51.08:0,51,492	0/0:16,0:16:45.07:0,45,435	0/0:25,0:25:66.09:0,66,633	0/0:18,0:18:54.09:0,54,521	0/0:15,0:15:42.06:0,42,406	0/0:12,0:12:36.06:0,36,348	0/0:19,0:19:57.09:0,57,550	0/0:11,0:11:24.04:0,24,232	0/0:10,0:10:27.03:0,27,255	0/0:26,0:26:66.07:0,66,637	0/0:27,0:27:54.22:0,54,668	0/0:23,0:19:48.07:0,48,464	0/0:28,0:28:69.10:0,69,666	0/0:13,0:13:33.04:0,33,312	0/0:18,0:18:39.03:0,39,366	0/0:26,0:26:75.09:0,75,713	0/0:7,0:7:21.03:0,21,202	0/0:15,0:15:36.04:0,36,342	0/0:15,0:15:42.07:0,42,406	0/0:26,0:25:72.10:0,72,689	0/0:3,0:3:9.01:0,9,87
chr10	24619124	.	TAA	T	4233.14	PASS	AB=0.600;AC=38;AF=0.679;AN=56;BaseQRankSum=-1.259;DP=428;FS=2.212;HRun=15;HaplotypeScore=56.6887;InbreedingCoeff=0.7831;MQ=60.21;MQ0=2;MQRankSum=2.124;QD=13.31;ReadPosRankSum=6.166;VQSLOD=3.6148;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:8,2:26:12.67:13,0,91	1/1:1,4:5:8.97:79,9,0	0/0:18,0:12:17.26:0,17,189	0/0:12,0:9:14.99:0,15,153	1/1:5,18:24:32.57:335,33,0	0/1:5,7:14:15.13:133,0,15	1/1:2,8:10:14.99:132,15,0	0/0:10,0:20:45:0,45,439	1/1:6,10:16:26.93:237,27,0	1/1:5,18:23:50.82:448,51,0	1/1:6,17:23:35.72:317,36,0	1/1:3,5:9:11.65:91,12,0	1/1:6,11:19:11.72:150,12,0	1/1:2,7:10:14.72:117,15,0	1/1:6,6:12:11.86:105,12,0	1/1:3,9:12:23.96:211,24,0	0/0:14,0:15:35.94:0,36,354	0/0:9,0:10:21.06:0,21,259	0/0:11,0:12:29.55:0,30,330	0/0:16,0:16:35.65:0,36,394	0/0:3,0:4:8.50:0,8,73	1/1:3,10:13:26.88:238,27,0	1/1:2,16:18:41.95:370,42,0	1/1:1,3:4:6:53,6,0	1/1:4,15:20:38.95:344,39,0	1/1:6,15:23:26.47:321,26,0	1/1:7,14:22:32.36:318,32,0	1/1:5,9:15:26.66:223,27,0
chr10	24622290	.	TG	T	1598.71	PASS	AC=8;AF=0.148;AN=54;BaseQRankSum=-11.053;DP=469;FS=0.000;HRun=10;HaplotypeScore=84.6555;InbreedingCoeff=0.9029;MQ=78.01;MQ0=2;MQRankSum=-4.641;QD=18.59;ReadPosRankSum=1.535;VQSLOD=4.2346;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:3.12:0,3,15	0/0:6,0:6:11.50:0,12,60	0/0:15,1:15:15.99:0,16,358	0/0:18,0:17:23.53:0,24,215	0/0:34,0:34:61.68:0,62,307	0/0:25,0:25:42.98:0,43,236	0/0:14,0:14:23.19:0,23,116	0/0:19,0:19:39.10:0,39,178	0/0:16,0:16:23:0,23,119	0/0:17,0:17:17.25:0,17,80	0/0:17,0:17:33.57:0,34,179	0/0:12,0:13:25.88:0,26,134	0/0:8,0:8:8.68:0,9,49	0/0:21,0:21:37.03:0,37,188	0/0:14,0:14:22.86:0,23,132	0/0:9,0:10:25.88:0,26,135	1/1:3,16:19:41.99:365,42,0	./.	1/1:5,16:21:47.98:417,48,0	1/1:2,27:30:80.02:683,80,0	1/1:3,12:16:35.02:292,35,0	0/0:27,0:27:42.63:0,43,223	0/0:22,0:22:36.93:0,37,185	0/0:10,0:10:28.65:0,29,150	0/0:12,0:12:11.50:0,12,60	0/0:15,0:15:25.45:0,25,155	0/0:22,0:25:45.44:0,45,227	0/0:6,0:5:11.50:0,12,60
chr10	24622299	.	G	GGA	9769.23	PASS	AC=42;AF=0.778;AN=54;BaseQRankSum=-12.494;DP=451;FS=10.218;HRun=0;HaplotypeScore=71.2717;InbreedingCoeff=0.9413;MQ=77.56;MQ0=2;MQRankSum=-2.804;QD=29.25;ReadPosRankSum=1.739;VQSLOD=6.1755;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,8:13:4.76:65,5,0	1/1:0,4:5:12.04:203,12,0	0/0:18,0:16:30.06:0,30,446	0/0:15,0:14:21.10:0,21,270	1/1:1,26:31:68.74:1008,69,0	1/1:1,21:23:42.04:676,42,0	1/1:0,12:13:26.96:404,27,0	1/1:1,16:21:56.67:713,57,0	1/1:0,16:16:26.98:421,27,0	1/1:2,11:16:23.52:431,24,0	1/1:2,15:20:35.52:469,36,0	1/1:1,11:12:27.09:451,27,0	1/1:1,7:8:9.03:152,9,0	1/1:0,18:20:39:625,39,0	1/1:1,11:14:23.96:345,24,0	1/1:1,9:11:27.09:452,27,0	0/0:19,0:19:50.64:0,51,363	./.	0/0:17,0:17:50.50:0,51,350	0/0:32,0:32:91.69:0,92,646	0/0:16,0:16:38.69:0,39,274	1/1:3,17:22:47.91:702,48,0	1/1:0,23:26:38.93:604,39,0	1/1:1,10:11:27.09:455,27,0	1/1:0,6:7:12.04:201,12,0	1/1:2,12:14:38.09:468,38,0	1/1:5,15:22:47.95:723,48,0	1/1:1,8:8:12.04:203,12,0
chr10	24624327	.	TACAC	T	4354.89	PASS	AB=0.902;AC=45;AF=0.833;AN=54;BaseQRankSum=-1.572;DP=408;FS=28.170;HRun=0;HaplotypeScore=73.8256;InbreedingCoeff=0.2107;MQ=66.94;MQ0=10;MQRankSum=3.071;QD=12.66;ReadPosRankSum=3.511;VQSLOD=2.7237;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:16,0:17:0:0,0,0	1/1:6,3:8:3.01:47,3,0	0/0:18,0:13:0.47:0,0,1	./.	1/1:9,6:17:8.54:242,9,0	1/1:8,4:13:8.39:102,8,0	1/1:9,4:13:12.04:187,12,0	0/0:23,0:22:18.06:0,18,372	1/1:5,4:9:9.03:140,9,0	1/1:9,8:17:27.05:359,27,0	1/1:9,7:16:15.05:213,15,0	1/1:2,6:8:15.05:234,15,0	1/1:9,4:15:15.02:192,15,0	1/1:3,5:9:8.82:140,9,0	0/1:11,0:13:40.98:41,0,53	1/1:3,5:10:4.28:201,4,0	1/1:14,8:22:24.08:375,24,0	0/1:11,0:11:70.72:71,0,74	1/1:8,2:10:6.02:94,6,0	0/1:11,1:12:2.71:66,0,3	0/1:12,2:13:40.81:41,0,51	1/1:3,5:9:9.02:122,9,0	1/1:7,5:13:15.05:234,15,0	1/1:6,8:14:21.07:328,21,0	1/1:16,7:25:21.06:290,21,0	1/1:16,4:20:12.04:179,12,0	1/1:4,10:16:26.99:384,27,0	1/1:7,1:7:6.01:75,6,0
chr10	24626210	.	GA	G	8018.06	PASS	AB=0.764;AC=42;AF=0.750;AN=56;BaseQRankSum=4.381;DP=608;FS=19.865;HRun=11;HaplotypeScore=73.4619;InbreedingCoeff=0.7683;MQ=79.29;MQ0=3;MQRankSum=-0.351;QD=17.10;ReadPosRankSum=4.129;VQSLOD=4.0692;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,21:24:59.87:487,60,0	1/1:0,10:10:29.97:246,30,0	0/0:38,1:27:25:0,25,378	0/1:34,2:24:23.01:23,0,228	1/1:5,21:27:50.39:417,50,0	1/1:4,18:23:49.98:400,50,0	0/1:5,13:18:22.03:254,0,22	1/1:8,25:33:65.88:538,66,0	1/1:5,21:26:62.92:517,63,0	1/1:1,13:14:38.95:320,39,0	1/1:6,19:27:54.48:430,54,0	1/1:3,16:19:47.94:394,48,0	1/1:5,16:21:18.95:362,19,0	1/1:1,20:21:56.93:468,57,0	1/1:5,21:26:34.74:486,35,0	1/1:5,11:16:35.94:295,36,0	0/0:14,0:14:42.11:0,42,448	0/0:10,2:13:2.25:0,2,207	0/0:20,0:20:42.10:0,42,445	0/0:29,2:31:56.54:0,57,795	0/0:21,0:21:40.91:0,41,414	1/1:3,20:23:56.92:468,57,0	1/1:2,21:23:56.93:468,57,0	1/1:2,13:16:35:277,35,0	1/1:1,8:9:23.97:197,24,0	1/1:4,16:21:43.78:351,44,0	1/1:3,23:27:55.61:449,56,0	1/1:1,7:8:20.97:172,21,0
chr10	24626829	.	T	TTG	3219.44	PASS	AB=1.000;AC=37;AF=0.661;AN=56;BaseQRankSum=7.178;DP=454;FS=13.731;HRun=0;HaplotypeScore=85.2604;InbreedingCoeff=0.7412;MQ=52.15;MQ0=28;MQRankSum=3.182;QD=11.42;ReadPosRankSum=-2.167;VQSLOD=2.0092;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:63.81:0,64,557	1/1:8,0:6:14.86:126,15,0	0/0:17,0:10:27.07:0,27,326	0/0:13,0:7:21.06:0,21,242	1/1:28,0:27:38.14:421,38,0	1/1:20,0:18:28.81:318,29,0	1/1:24,0:23:3.70:120,4,0	0/0:19,0:18:42.03:0,42,473	1/1:16,0:16:27.04:305,27,0	1/1:12,0:12:21.05:217,21,0	1/1:15,0:15:33.09:372,33,0	1/1:13,0:13:6.02:72,6,0	1/1:7,0:7:3.01:36,3,0	1/1:18,0:17:5.26:108,5,0	1/1:8,0:7:18.01:189,18,0	1/1:13,0:13:4.61:64,5,0	0/0:27,0:24:22.16:0,22,456	0/0:18,0:17:26.67:0,27,292	0/0:10,0:10:24.08:0,24,298	0/0:16,0:14:26.77:0,27,293	0/0:23,0:16:10.46:0,10,338	1/1:14,0:14:30.08:332,30,0	1/1:13,0:12:1.83:31,2,0	0/1:22,0:21:6.07:331,0,6	1/1:4,11:15:0.46:1,0,0	1/1:12,0:11:26.86:244,27,0	1/1:19,0:17:9.49:98,9,0	1/1:4,0:2:3.01:35,3,0
chr10	24626832	.	T	TGA	5918.85	PASS	AB=0.738;AC=29;AF=0.518;AN=56;BaseQRankSum=0.123;DP=463;FS=40.696;HRun=0;HaplotypeScore=79.4932;InbreedingCoeff=0.4573;MQ=55.14;MQ0=23;MQRankSum=3.831;QD=21.92;ReadPosRankSum=-1.328;VQSLOD=2.9753;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:31:64.75:0,65,847	1/1:2,6:6:15.05:226,15,0	0/0:18,0:11:30.07:0,30,434	0/0:14,0:8:24.05:0,24,330	1/1:4,26:29:26.14:627,26,0	1/1:17,3:18:21.89:574,22,0	1/1:3,18:22:9.70:215,10,0	0/0:20,0:19:54.07:0,54,721	0/1:16,0:16:6.71:497,0,7	1/1:0,12:12:33.03:499,33,0	1/1:0,15:15:33.11:583,33,0	1/1:13,0:13:5.84:101,6,0	1/1:7,0:7:3.01:53,3,0	0/1:7,11:17:42.88:199,0,43	0/1:7,1:7:2.88:306,0,3	0/1:3,11:14:2.71:102,0,3	0/0:25,0:23:57.07:0,57,735	0/0:18,0:17:42:0,42,501	0/0:11,0:11:30.05:0,30,412	0/0:17,0:15:27.09:0,27,398	0/0:22,0:17:39.10:0,39,533	1/1:2,12:14:8.17:525,8,0	0/1:2,12:13:14.68:52,0,15	0/1:22,0:21:79.12:643,0,79	0/0:15,1:15:2.68:0,3,11	1/1:3,9:12:30.06:495,30,0	0/1:4,16:18:27.07:165,0,27	1/1:4,0:3:3.01:58,3,0
chr10	24627006	.	ACG	A	444.28	PASS	AC=24;AF=0.632;AN=38;BaseQRankSum=3.317;DP=175;FS=0.880;HRun=0;HaplotypeScore=33.8592;InbreedingCoeff=0.6911;MQ=112.06;MQ0=0;MQRankSum=-2.715;QD=19.32;ReadPosRankSum=-5.889;VQSLOD=1.6087;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:1,1:2:5.97:49,6,0	1/1:2,0:2:6:55,6,0	0/0:27,0:27:78.21:0,78,1410	0/0:18,0:18:49.62:0,50,969	1/1:1,0:1:2.97:20,3,0	./.	1/1:1,0:1:3:29,3,0	1/1:4,0:4:9.02:103,9,0	1/1:1,0:1:3.01:39,3,0	./.	1/1:3,0:3:6.02:77,6,0	1/1:1,0:1:3:25,3,0	./.	1/1:2,0:2:5.93:40,6,0	1/1:0,2:2:5.95:43,6,0	./.	0/0:22,0:22:66.20:0,66,1299	0/0:17,0:16:48.16:0,48,972	0/0:21,0:21:63.22:0,63,1255	0/0:25,0:25:75.26:0,75,1468	0/0:20,0:20:57.20:0,57,1155	./.	./.	./.	./.	1/1:1,0:1:3.01:45,3,0	1/1:2,1:3:8.95:71,9,0	./.
chr10	24629629	.	A	AT	11769.41	PASS	AB=1.000;AC=43;AF=0.768;AN=56;BaseQRankSum=-10.799;DP=434;FS=6.326;HRun=5;HaplotypeScore=44.5368;InbreedingCoeff=0.8928;MQ=68.51;MQ0=0;MQRankSum=1.717;QD=33.82;ReadPosRankSum=0.208;VQSLOD=4.9369;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,20:21:54.18:710,54,0	1/1:0,9:9:27.09:355,27,0	0/0:11,0:10:11.51:0,12,93	0/1:6,0:6:12.13:19,0,12	1/1:3,19:22:54.18:711,54,0	1/1:1,19:20:21.93:639,22,0	1/1:2,9:11:21.07:276,21,0	1/1:1,33:34:99:1261,99,0	1/1:1,9:10:21.07:276,21,0	1/1:2,13:15:39.13:513,39,0	1/1:1,18:19:54.18:708,54,0	1/1:1,19:20:60.19:782,60,0	1/1:0,11:11:30.10:395,30,0	1/1:0,12:12:30.10:395,30,0	1/1:1,10:11:30.10:395,30,0	1/1:2,7:9:24.07:303,24,0	0/0:19,0:19:57.12:0,57,603	0/0:18,0:18:42.10:0,42,451	0/0:6,0:6:15.04:0,15,161	0/0:22,0:22:66.12:0,66,687	0/0:10,0:10:30.08:0,30,322	1/1:1,9:10:27.09:355,27,0	1/1:2,17:19:42.14:553,42,0	1/1:1,10:11:30.10:395,30,0	1/1:3,23:26:72.23:942,72,0	1/1:2,17:19:51.14:643,51,0	1/1:0,22:22:57.19:750,57,0	1/1:1,10:11:30.10:395,30,0
chr10	24629684	.	TGATAGATA	T	9186.24	PASS	AB=1.000;AC=37;AF=0.712;AN=52;BaseQRankSum=-3.024;DP=545;FS=0.000;HRun=0;HaplotypeScore=175.6279;InbreedingCoeff=0.8139;MQ=55.73;MQ0=8;MQRankSum=-4.569;QD=26.17;ReadPosRankSum=1.414;VQSLOD=4.3883;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:25:37.01:0,37,1256	1/1:7,4:11:15.05:358,15,0	./.	./.	1/1:21,9:30:21.07:490,21,0	1/1:9,6:16:21.07:506,21,0	1/1:10,2:13:3.01:74,3,0	0/0:33,0:30:6.02:0,6,88	1/1:7,6:12:24.08:566,24,0	1/1:17,9:26:35.58:828,36,0	1/1:21,4:25:30.10:658,30,0	1/1:17,1:18:9.03:218,9,0	1/1:11,7:19:27.09:657,27,0	1/1:8,1:9:9.03:218,9,0	1/1:8,9:18:27.09:669,27,0	1/1:4,11:15:15.05:372,15,0	0/0:13,0:20:15.52:0,16,265	0/0:12,0:19:21.54:0,22,466	0/0:9,0:12:21.96:0,22,547	0/0:16,0:26:19.43:0,19,388	0/0:10,0:13:12.04:0,12,230	1/1:11,6:16:12.04:296,12,0	1/1:16,3:19:21.53:408,22,0	0/1:5,0:6:18.65:125,0,19	1/1:19,7:25:30.10:702,30,0	1/1:18,4:22:21.07:488,21,0	1/1:23,8:31:42.14:989,42,0	1/1:10,7:17:24.08:565,24,0
chr10	24631307	.	G	GA	706.67	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-5.906;DP=550;FS=14.229;HRun=8;HaplotypeScore=51.1511;InbreedingCoeff=0.9617;MQ=79.23;MQ0=0;MQRankSum=-1.850;QD=26.17;ReadPosRankSum=-4.124;VQSLOD=1.5086;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:57.02:0,57,522	0/0:7,0:7:21.01:0,21,192	0/0:13,0:13:11.58:0,12,151	0/0:22,0:22:51.02:0,51,464	0/0:22,0:22:57.02:0,57,521	0/0:25,0:25:66.03:0,66,604	0/0:11,0:11:27:0,27,243	1/1:3,23:27:72.03:802,72,0	0/0:24,0:24:66.02:0,66,604	0/0:16,0:16:42.02:0,42,384	0/0:15,0:15:41.94:0,42,373	0/0:23,0:23:60.02:0,60,549	0/0:23,0:23:63.03:0,63,577	0/0:18,0:18:48.01:0,48,435	0/0:26,0:26:59.96:0,60,541	0/0:12,0:12:30:0,30,271	0/0:28,0:29:80.04:0,80,712	0/0:23,0:23:60.03:0,60,549	0/0:24,0:24:60.03:0,60,549	0/0:21,0:21:54.01:0,54,488	0/0:21,0:21:60.03:0,60,549	0/0:13,0:13:38.96:0,39,348	0/0:14,0:14:36.01:0,36,329	0/0:22,0:22:54.02:0,54,494	0/0:18,0:18:53.99:0,54,481	0/0:25,0:25:69.03:0,69,628	0/0:21,0:20:54.01:0,54,490	0/0:12,0:12:36.02:0,36,329
chr10	24631441	.	G	GTTTT	6473.85	PASS	AB=1.000;AC=41;AF=0.732;AN=56;BaseQRankSum=-3.601;DP=538;FS=4.493;HRun=11;HaplotypeScore=85.5304;InbreedingCoeff=0.6478;MQ=64.83;MQ0=9;MQRankSum=-1.357;QD=16.43;ReadPosRankSum=-0.292;VQSLOD=2.3505;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:24:13.23:0,13,375	1/1:4,9:13:9.03:209,9,0	0/1:28,0:9:15.31:15,0,23	0/1:34,0:16:22.13:23,0,22	1/1:9,14:25:48.66:752,49,0	1/1:1,14:17:27.09:561,27,0	1/1:1,6:10:11.87:178,12,0	0/1:31,0:31:29.04:29,0,178	1/1:1,16:18:14.79:284,15,0	1/1:12,3:16:35.59:490,36,0	1/1:4,10:17:20.90:309,21,0	1/1:0,13:14:12.04:266,12,0	1/1:1,9:10:9.03:207,9,0	1/1:15,2:17:41.13:556,41,0	1/1:1,16:18:11.96:230,12,0	1/1:1,1:11:9.03:184,9,0	0/0:34,0:34:73.51:0,74,1111	0/0:26,0:28:63.17:0,63,717	0/0:30,0:29:70.30:0,70,792	0/0:14,0:16:32.78:0,33,426	0/0:11,0:11:9.19:0,9,345	1/1:2,12:16:21.86:283,22,0	1/1:4,11:16:13.77:315,14,0	1/1:2,14:17:9.03:208,9,0	1/1:6,1:7:12.98:124,13,0	1/1:7,14:25:47.71:682,48,0	1/1:5,13:19:21.03:362,21,0	1/1:3,3:8:9.03:208,9,0
chr10	24631615	.	CCCTG	C	3962.69	PASS	AB=1.000;AC=42;AF=0.778;AN=54;BaseQRankSum=7.308;DP=313;FS=0.000;HRun=0;HaplotypeScore=71.9872;InbreedingCoeff=0.7538;MQ=85.60;MQ0=1;MQRankSum=-3.949;QD=18.96;ReadPosRankSum=3.341;VQSLOD=3.1305;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,0:7:14.98:241,15,0	./.	0/0:19,0:16:29.20:0,29,541	0/1:29,0:25:13.32:13,0,720	1/1:2,0:2:5.98:47,6,0	1/1:10,1:11:23.97:243,24,0	1/1:22,0:22:50.94:440,51,0	1/1:1,14:15:45:721,45,0	1/1:8,0:8:18:164,18,0	1/1:3,0:3:5.93:40,6,0	1/1:3,0:3:8.86:62,9,0	1/1:10,0:10:20.74:177,21,0	1/1:8,0:8:20.99:201,21,0	1/1:10,0:10:23.95:204,24,0	1/1:6,0:6:11.88:98,12,0	1/1:6,1:7:17.80:152,18,0	0/0:29,0:29:84.29:0,84,1838	0/0:18,0:18:24.22:0,24,1098	0/0:7,0:7:15.05:0,15,345	0/1:2,0:2:0:0,0,0	0/0:30,0:30:72.33:0,72,1407	1/1:2,0:2:3.01:31,3,0	1/1:5,1:6:11.99:109,12,0	1/1:29,0:29:28.06:351,28,0	1/1:8,0:8:23.93:209,24,0	1/1:8,0:8:20.90:186,21,0	1/1:7,0:7:17.97:152,18,0	1/1:5,0:5:14.97:122,15,0
chr10	24631619	.	G	GT	6354.38	PASS	AB=0.986;AC=42;AF=0.778;AN=54;BaseQRankSum=-0.925;DP=311;FS=1.572;HRun=1;HaplotypeScore=52.4092;InbreedingCoeff=0.7315;MQ=79.13;MQ0=4;MQRankSum=-2.943;QD=29.97;ReadPosRankSum=3.057;VQSLOD=4.6521;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,8:9:14.98:180,15,0	./.	0/0:15,0:12:29.20:0,29,358	0/1:33,0:24:23.15:23,0,497	1/1:1,2:3:6.02:96,6,0	1/1:2,9:11:24.08:369,24,0	1/1:1,21:22:51.17:813,51,0	1/1:15,0:15:44.89:475,45,0	1/1:1,7:8:21.07:335,21,0	1/1:0,2:2:6.02:96,6,0	1/1:1,3:4:9.03:144,9,0	1/1:0,9:10:21.05:324,21,0	1/1:0,7:7:21.07:335,21,0	1/1:2,10:12:24.08:382,24,0	1/1:1,4:5:12.04:191,12,0	1/1:1,6:7:21.02:292,21,0	0/0:29,0:29:87.26:0,87,1196	0/0:17,1:18:6.44:0,6,660	0/0:7,0:7:16.03:0,16,232	0/1:1,0:1:0:0,0,0	0/0:30,0:30:70.57:0,71,984	1/1:0,2:2:3.01:48,3,0	1/1:1,5:6:12.04:191,12,0	1/1:1,25:27:51.17:814,51,0	1/1:0,8:8:24.08:384,24,0	1/1:0,7:7:21.07:335,21,0	1/1:0,7:7:18.06:287,18,0	1/1:0,5:5:15.05:240,15,0
chr10	24631767	.	C	CAGA	1882.43	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-6.977;DP=474;FS=7.970;HRun=0;HaplotypeScore=66.8736;InbreedingCoeff=0.9946;MQ=94.96;MQ0=0;MQRankSum=-3.082;QD=58.83;ReadPosRankSum=-0.110;VQSLOD=4.8103;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,17:18:48.13:1058,48,0	0/0:8,0:8:24.08:0,24,406	0/0:25,0:25:69.21:0,69,1126	0/0:22,0:22:53.21:0,53,849	0/0:9,0:9:24.08:0,24,409	0/0:17,0:17:45.15:0,45,763	0/0:20,0:20:60.21:0,60,1023	1/1:2,12:14:42.14:946,42,0	0/0:16,0:16:45.15:0,45,767	0/0:17,0:17:48.16:0,48,794	0/0:10,0:10:30.09:0,30,478	0/0:15,0:15:42.14:0,42,715	0/0:21,0:21:63.22:0,63,1070	0/0:17,0:17:48.15:0,48,792	0/0:21,0:20:63.22:0,63,1074	0/0:20,0:20:57.20:0,57,972	0/0:25,0:25:72.25:0,72,1228	0/0:17,0:17:51.12:0,51,812	0/0:9,0:9:27.08:0,27,435	0/0:11,0:11:33.11:0,33,563	0/0:31,0:31:93.26:0,93,1503	0/0:11,0:11:33.10:0,33,537	0/0:12,0:12:33.11:0,33,563	0/0:20,0:20:57.18:0,57,946	0/0:18,0:18:54.18:0,54,921	0/0:21,0:21:60.19:0,60,994	0/0:22,0:22:63.18:0,63,1020	0/0:7,0:7:21.07:0,21,358
chr10	24632349	.	GA	G	7480.55	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-10.114;DP=592;FS=8.114;HRun=10;HaplotypeScore=72.3888;InbreedingCoeff=0.9604;MQ=74.36;MQ0=6;MQRankSum=-0.198;QD=20.33;ReadPosRankSum=6.988;VQSLOD=4.8504;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:66.17:0,66,721	1/1:0,6:6:18:156,18,0	0/0:45,2:21:5.40:0,5,230	0/0:28,0:20:33.14:0,33,385	1/1:5,31:36:86.87:745,87,0	1/1:2,23:25:59.98:521,60,0	1/1:2,9:11:20.99:182,21,0	0/0:2,0:25:59.47:0,59,294	1/1:2,18:20:44.99:391,45,0	1/1:0,25:25:74.99:651,75,0	1/1:2,31:33:61.07:703,61,0	1/1:0,7:7:18:156,18,0	1/1:3,14:17:32.98:286,33,0	1/1:2,13:15:35.99:312,36,0	1/1:3,15:18:35.99:313,36,0	1/1:3,15:18:32.96:286,33,0	0/0:5,0:28:59.84:0,60,304	0/0:5,0:11:14.50:0,15,91	0/0:3,0:24:60.46:0,60,313	0/0:6,0:33:77.90:0,78,436	0/0:1,0:4:8.56:0,9,43	1/1:2,12:14:29.93:253,30,0	1/1:3,13:16:38.98:339,39,0	1/1:1,9:10:20.98:182,21,0	1/1:5,20:25:59.98:521,60,0	1/1:0,17:17:50.91:428,51,0	1/1:1,23:24:56.99:495,57,0	1/1:2,29:31:12.82:560,13,0
chr10	24634989	.	C	CA	556.92	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.822;DP=595;FS=14.948;HRun=9;HaplotypeScore=67.8078;InbreedingCoeff=0.9562;MQ=82.91;MQ0=0;MQRankSum=2.069;QD=17.97;ReadPosRankSum=-4.950;VQSLOD=1.3886;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:50.99:0,51,443	0/0:13,0:14:34.99:0,35,287	0/0:15,0:16:21.96:0,22,227	0/0:20,0:20:14.47:0,14,188	0/0:30,0:30:77.47:0,77,659	0/0:27,0:27:70.11:0,70,601	0/0:12,0:13:25.92:0,26,214	1/1:8,23:31:43.49:652,43,0	0/0:21,0:21:44.98:0,45,391	0/0:32,0:32:78.79:0,79,656	0/0:23,0:23:64.54:0,65,551	0/0:17,0:17:44.96:0,45,387	0/0:32,2:34:22.33:0,22,606	0/0:26,0:26:62.97:0,63,547	0/0:24,0:24:56.96:0,57,495	0/0:24,0:24:62.97:0,63,546	0/0:25,0:25:65.94:0,66,564	0/0:14,0:14:38.98:0,39,338	0/0:26,0:26:56.83:0,57,479	0/0:27,0:27:68.08:0,68,597	0/0:9,0:9:16.54:0,17,134	0/0:16,0:16:41.78:0,42,331	0/0:16,0:16:20.72:0,21,271	0/0:15,0:15:35.98:0,36,313	0/0:19,0:19:47.97:0,48,416	0/0:20,0:20:47.82:0,48,416	0/0:28,0:28:71.95:0,72,620	0/0:8,0:8:20.99:0,21,182
chr10	24635217	.	TCACC	T	3414.44	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=12.463;DP=761;FS=2.228;HRun=0;HaplotypeScore=123.5253;InbreedingCoeff=0.9959;MQ=86.51;MQ0=0;MQRankSum=-5.613;QD=49.48;ReadPosRankSum=-1.431;VQSLOD=4.1275;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,38:39:99:1897,99,0	0/0:6,0:6:18.04:0,18,425	0/0:29,0:29:74.88:0,75,1897	0/0:22,0:22:66.22:0,66,1637	0/0:35,0:35:99:0,105,2794	0/0:22,0:22:63.22:0,63,1718	0/0:24,0:24:72.23:0,72,1835	1/1:1,29:30:87.24:1517,87,0	0/0:30,0:30:90.31:0,90,2390	0/0:37,0:37:99:0,111,2971	0/0:24,0:24:72.24:0,72,1868	0/0:26,0:26:78.27:0,78,2118	0/0:40,0:40:99:0,120,3253	0/0:36,0:36:99:0,102,2697	0/0:35,0:35:99:0,102,2721	0/0:27,0:27:78.27:0,78,2109	0/0:24,0:24:72.25:0,72,1903	0/0:17,0:17:51.18:0,51,1397	0/0:20,0:20:57.18:0,57,1445	0/0:26,0:26:78.27:0,78,2089	0/0:40,0:40:99:0,111,2981	0/0:27,0:27:81.28:0,81,2171	0/0:23,0:23:69.24:0,69,1860	0/0:23,0:23:69.24:0,69,1889	0/0:19,0:19:57.20:0,57,1524	0/0:29,0:29:78.27:0,78,2078	0/0:34,0:33:99:0,102,2722	0/0:17,0:17:51.18:0,51,1326
chr10	24639932	.	TGA	T	303.71	PASS	AB=1.000;AC=32;AF=0.696;AN=46;BaseQRankSum=5.162;DP=566;FS=12.910;HRun=0;HaplotypeScore=165.7930;InbreedingCoeff=0.3361;MQ=62.35;MQ0=16;MQRankSum=-1.963;QD=0.83;ReadPosRankSum=-2.988;VQSLOD=1.1117;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:21:15.99:0,16,97	0/1:7,0:7:0.65:1,0,6	./.	./.	1/1:21,0:21:4.62:11,5,0	1/1:23,0:21:3.59:9,4,0	./.	./.	0/0:7,0:7:2.80:0,3,13	0/0:28,0:27:4.10:0,4,54	1/1:27,0:27:2.80:8,3,0	1/1:27,0:27:6.56:17,7,0	1/1:27,0:27:6.27:49,6,0	1/1:17,0:17:8.35:27,8,0	1/1:18,0:18:3.11:8,3,0	1/1:19,0:19:6.43:21,6,0	0/1:19,0:19:22.91:23,0,39	1/1:16,3:19:9.95:135,10,0	0/0:14,0:14:5.85:0,6,48	1/1:20,2:24:5.99:50,6,0	0/1:12,0:12:7.03:12,0,7	1/1:25,0:25:2.13:6,2,0	1/1:13,0:12:1.25:3,1,0	1/1:20,0:19:0.34:1,0,0	1/1:20,0:20:8.82:22,9,0	0/0:16,0:16:9.42:0,9,59	0/1:25,0:24:8.82:37,0,9	./.
chr10	24639952	.	AGAG	A	246.39	PASS	AB=0.829;AC=15;AF=0.268;AN=56;BaseQRankSum=10.842;DP=460;FS=14.413;HRun=0;HaplotypeScore=154.1969;InbreedingCoeff=-0.1763;MQ=41.03;MQ0=42;MQRankSum=-9.242;QD=1.05;ReadPosRankSum=9.627;VQSLOD=0.5317;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:25:39.19:0,39,532	1/1:3,2:5:4.56:23,5,0	0/0:22,0:9:24.07:0,24,288	0/0:19,0:8:11.45:0,11,100	0/1:15,3:18:10.04:10,0,77	0/1:15,3:13:22.54:26,0,23	0/0:4,0:4:2.76:0,3,14	0/0:15,0:14:42.05:0,42,499	0/0:5,0:5:7.30:0,7,40	0/0:19,1:18:18.14:0,18,268	0/1:14,3:16:1.39:1,0,75	0/1:13,5:18:20.65:21,0,98	0/1:17,8:23:80.13:80,0,190	0/1:8,5:13:43.36:43,0,59	0/1:10,3:12:12.90:13,0,30	0/1:13,4:16:36.68:37,0,105	0/0:21,0:19:30.28:0,30,369	0/0:23,0:20:52.25:0,52,578	0/0:10,0:10:25.80:0,26,363	0/0:24,0:23:41.97:0,42,498	0/0:13,0:12:21.06:0,21,278	0/1:17,2:17:5.53:6,0,60	0/1:12,1:11:0.55:1,0,43	0/1:23,1:17:5.49:5,0,11	0/1:11,4:15:15.59:41,0,16	0/0:14,1:12:9.25:0,9,126	0/1:13,7:18:84.30:84,0,99	0/0:7,0:6:14.58:0,15,99
chr10	24639963	.	G	GAC	165.11	PASS	AB=0.964;AC=8;AF=0.154;AN=52;BaseQRankSum=7.219;DP=402;FS=6.615;HRun=0;HaplotypeScore=143.1351;InbreedingCoeff=0.0779;MQ=36.13;MQ0=46;MQRankSum=-5.186;QD=1.53;ReadPosRankSum=7.045;VQSLOD=1.4159;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:25,5:27:91.01:208,0,91	0/0:5,0:5:1.13:0,1,10	0/0:8,0:1:2.99:0,3,24	./.	0/0:15,0:15:7.13:0,7,62	1/1:17,0:11:0.69:3,1,0	./.	0/0:21,0:19:56.44:0,56,395	0/0:6,0:6:5.73:0,6,35	0/0:16,0:13:30.48:0,30,151	0/0:15,0:14:3.66:0,4,25	0/0:16,0:16:9.94:0,10,63	0/1:21,0:19:9.33:9,0,66	0/1:11,0:11:6.40:6,0,8	0/0:12,0:11:1.15:0,1,5	0/0:12,0:11:1.32:0,1,27	0/0:21,0:19:27.20:0,27,239	0/0:25,0:22:58.08:0,58,422	0/0:12,0:12:32.82:0,33,285	0/0:22,0:21:25.15:0,25,199	0/0:13,0:10:11.97:0,12,94	0/0:16,0:14:3.71:0,4,27	0/0:9,0:7:1.59:0,2,12	0/0:21,0:14:0.47:0,0,2	1/1:12,0:12:0.70:7,1,0	0/0:14,0:11:19.23:0,19,90	0/1:17,0:15:20.54:35,0,21	0/0:5,0:4:3.46:0,3,28
chr10	24639983	.	GACAGAGAC	G	4147.52	PASS	AB=1.000;AC=45;AF=0.865;AN=52;BaseQRankSum=0.397;DP=436;FS=10.787;HRun=0;HaplotypeScore=180.4824;InbreedingCoeff=0.2712;MQ=36.02;MQ0=43;MQRankSum=3.202;QD=10.24;ReadPosRankSum=-4.179;VQSLOD=0.5229;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:32,0:29:20.47:20,0,35	1/1:7,0:7:3.87:64,4,0	./.	./.	1/1:16,0:15:23.74:291,24,0	1/1:16,0:11:12.90:168,13,0	1/1:14,0:13:9.03:149,9,0	0/0:25,0:21:41.33:0,41,466	1/1:11,0:11:5.83:99,6,0	1/1:15,0:12:12.40:263,12,0	1/1:18,0:16:14.73:158,15,0	1/1:21,0:21:26.56:322,27,0	1/1:24,0:22:17.02:250,17,0	1/1:13,0:13:14.18:108,14,0	1/1:13,0:12:6.38:67,6,0	1/1:16,0:15:7.57:101,8,0	0/1:19,0:17:36.84:219,0,37	1/1:15,0:12:26.20:206,26,0	0/1:12,0:11:99:162,0,112	1/1:8,10:17:4.30:20,4,0	1/1:17,0:14:12.04:186,12,0	1/1:18,0:15:8.94:116,9,0	1/1:12,0:10:14.96:208,15,0	1/1:26,0:19:7.51:101,8,0	1/1:12,0:12:17.51:132,18,0	1/1:22,0:19:37.65:534,38,0	1/1:18,0:15:13.16:203,13,0	0/0:2,0:1:2.74:0,3,12
chr10	24640488	.	T	TC	1326.25	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=8.857;DP=658;FS=13.601;HRun=0;HaplotypeScore=68.6840;InbreedingCoeff=0.9778;MQ=68.28;MQ0=0;MQRankSum=-1.196;QD=37.89;ReadPosRankSum=0.640;VQSLOD=2.4227;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,34:35:93.31:1421,93,0	0/0:7,0:7:21.07:0,21,294	0/0:10,0:10:28.29:0,28,332	0/0:5,0:5:15.02:0,15,179	0/0:31,0:31:90.27:0,90,1198	0/0:29,0:29:84.26:0,84,1129	0/0:27,0:27:81.25:0,81,1112	0/0:39,0:39:99:0,111,1509	0/0:18,0:18:54.16:0,54,724	0/0:24,0:24:72.24:0,72,994	0/0:26,0:26:78.25:0,78,1076	0/0:30,0:30:84.22:0,84,1120	0/0:26,0:26:78.16:0,78,1045	0/0:32,0:32:96.25:0,96,1274	0/0:38,0:38:99:0,111,1502	0/0:29,0:29:87.28:0,87,1198	0/0:14,0:14:42.14:0,42,587	0/0:15,0:15:45.12:0,45,609	0/0:21,0:21:60.20:0,60,837	0/0:24,0:23:69.22:0,69,946	0/0:22,0:22:66.21:0,66,893	0/0:23,0:23:69.20:0,69,930	0/0:20,0:20:60.19:0,60,821	0/0:28,0:28:81.22:0,81,1053	0/0:22,0:22:66.20:0,66,891	0/0:32,0:32:93.29:0,93,1255	0/0:23,0:23:66.22:0,66,922	0/0:8,0:8:24.08:0,24,335
chr10	24642237	.	G	GA	669.96	PASS	AC=2;AF=0.100;AN=20;BaseQRankSum=-4.123;DP=241;FS=1.823;HRun=6;HaplotypeScore=35.1215;InbreedingCoeff=0.7129;MQ=114.58;MQ0=0;MQRankSum=-0.806;QD=25.77;ReadPosRankSum=2.262;VQSLOD=3.2540;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,23:26:60.19:755,60,0	./.	0/0:20,0:20:41.10:0,41,351	0/0:21,0:21:25.04:0,25,410	0/0:4,0:4:2.96:0,3,19	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	0/0:39,0:39:99:0,111,1115	0/0:38,0:38:99:0,111,1115	0/0:27,0:27:66.13:0,66,667	0/0:18,0:18:51.11:0,51,520	0/0:24,0:24:69.14:0,69,696	./.	./.	./.	./.	./.	0/0:2,0:2:2.96:0,3,19	./.
chr10	24644844	.	T	TGC	67.73	PASS	AB=0.790;AC=8;AF=0.143;AN=56;BaseQRankSum=8.188;DP=628;FS=1.925;HRun=0;HaplotypeScore=201.5873;InbreedingCoeff=-0.1850;MQ=48.77;MQ0=6;MQRankSum=-9.402;QD=0.42;ReadPosRankSum=3.566;VQSLOD=2.6346;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:53.81:0,54,512	0/1:7,1:8:9.51:10,0,89	0/0:26,0:12:32.12:0,32,448	0/0:34,0:14:20.55:0,21,316	0/1:25,8:33:4.15:4,0,358	0/1:9,3:12:9.34:9,0,172	0/0:19,0:18:17.31:0,17,363	0/0:26,0:24:66.87:0,67,783	0/0:16,4:20:4.31:0,4,297	0/0:22,2:24:0.49:0,0,410	0/1:9,5:14:20.41:20,0,195	0/0:12,2:14:11.45:0,11,247	0/0:17,4:21:12.61:0,13,439	0/1:19,6:25:35.58:36,0,400	0/0:20,3:23:26.81:0,27,454	0/1:14,6:19:59.77:60,0,206	0/0:33,0:33:68.73:0,69,623	0/0:29,0:29:68.71:0,69,688	0/0:25,0:25:13.49:0,13,451	0/0:23,0:22:45.92:0,46,499	0/0:18,0:18:24.25:0,24,394	0/0:14,4:18:5.75:0,6,305	0/0:20,1:21:35.60:0,36,347	0/0:22,2:24:16.96:0,17,442	0/0:26,4:30:13.04:0,13,547	0/1:18,8:26:39.70:40,0,348	0/1:16,8:23:15.80:16,0,330	0/0:11,1:12:13.33:0,13,299
chr10	24644858	.	T	TTTTTG	15927.97	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-5.767;DP=671;FS=1.940;HRun=0;HaplotypeScore=183.4723;InbreedingCoeff=0.9751;MQ=51.32;MQ0=9;MQRankSum=-5.386;QD=38.20;ReadPosRankSum=3.617;VQSLOD=4.6566;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:48.08:0,48,751	1/1:6,2:8:9.03:210,9,0	0/0:31,0:17:23.27:0,23,331	0/0:35,0:13:9.01:0,9,155	1/1:23,12:36:57.19:1417,57,0	1/1:7,5:13:21.07:568,21,0	1/1:12,7:18:15.05:422,15,0	0/0:29,0:28:36.11:0,36,602	1/1:18,2:21:24.08:573,24,0	1/1:13,9:21:30.10:731,30,0	1/1:10,6:16:30.09:703,30,0	1/1:9,7:16:18.06:499,18,0	1/1:12,12:28:48.16:1290,48,0	1/1:11,10:22:45.15:1199,45,0	1/1:13,8:22:27.09:739,27,0	1/1:11,7:17:30.10:810,30,0	0/0:39,0:39:72.07:0,72,1149	0/0:30,0:30:57.13:0,57,983	0/0:24,0:22:42.12:0,42,693	0/0:23,0:22:39.10:0,39,667	0/0:14,0:14:21.07:0,21,367	1/1:13,9:25:41.96:911,42,0	1/1:11,9:21:27.09:718,27,0	1/1:14,13:27:31.35:745,31,0	1/1:17,14:33:48.16:1306,48,0	1/1:16,9:28:54.16:1328,54,0	1/1:18,12:30:42.14:1088,42,0	1/1:4,7:10:24.08:671,24,0
chr10	24644960	.	TTTG	T	2638.60	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=-9.815;DP=525;FS=19.366;HRun=0;HaplotypeScore=104.8316;InbreedingCoeff=0.2870;MQ=64.47;MQ0=8;MQRankSum=5.885;QD=8.38;ReadPosRankSum=7.986;VQSLOD=0.6883;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:23.85:0,24,179	1/1:3,0:3:5.98:46,6,0	0/0:34,0:26:27.51:0,28,360	0/0:32,0:20:27.14:0,27,295	1/1:12,0:12:20.95:169,21,0	1/1:7,0:7:17.96:145,18,0	0/1:23,0:21:53.36:227,0,53	0/0:25,0:27:50.86:0,51,426	0/1:16,0:16:45.34:76,0,45	1/1:10,0:8:11.61:95,12,0	1/1:10,0:9:8.93:72,9,0	0/1:30,0:30:67.40:217,0,67	0/1:21,0:20:91.57:144,0,92	0/1:29,0:29:99:221,0,192	0/1:26,0:26:31.93:247,0,32	0/1:21,0:21:99:152,0,136	0/0:35,0:37:80.96:0,81,784	0/0:32,0:32:42.89:0,43,552	0/0:10,0:9:18.01:0,18,163	0/0:12,0:12:8.99:0,9,76	0/0:11,0:11:18.47:0,18,182	1/1:10,0:10:11.98:99,12,0	1/1:9,0:9:23.97:198,24,0	0/1:41,0:41:99:229,0,230	1/1:13,0:13:14.93:122,15,0	1/1:4,10:14:26.93:217,27,0	0/1:19,0:19:97.26:147,0,97	1/1:1,0:1:2.80:13,3,0
chr10	24646177	.	TG	T	488.47	PASS	AB=0.907;AC=11;AF=0.196;AN=56;BaseQRankSum=2.442;DP=465;FS=18.572;HRun=10;HaplotypeScore=74.8528;InbreedingCoeff=0.1705;MQ=81.36;MQ0=0;MQRankSum=-4.657;QD=3.46;ReadPosRankSum=0.366;VQSLOD=-0.3279;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:7,0:21:26.45:78,26,0	0/0:7,0:7:15.04:0,15,166	0/0:17,0:16:16.51:0,17,253	0/0:24,2:26:4.21:0,4,400	0/0:20,0:20:24.05:0,24,257	0/1:18,0:18:2.15:2,0,192	0/1:15,2:17:12.75:13,0,318	1/1:7,21:28:54.84:470,55,0	0/1:15,2:17:16.05:16,0,272	0/1:9,1:11:13.94:14,0,87	0/0:14,0:14:12.49:0,12,332	0/0:14,0:14:26.95:0,27,235	0/0:20,0:20:30.05:0,30,315	0/1:10,2:12:27.04:27,0,147	0/0:27,0:27:30.07:0,30,324	0/0:21,0:21:48.08:0,48,510	0/0:15,0:15:27.03:0,27,278	0/1:8,1:9:11.02:11,0,118	0/1:7,1:8:8.03:8,0,130	0/0:14,0:14:15.49:0,15,150	0/0:8,0:8:11.97:0,12,132	0/0:13,0:13:30.06:0,30,321	0/0:15,0:15:30.05:0,30,313	0/0:19,0:19:42.06:0,42,447	0/0:12,1:13:1:0,1,224	0/0:19,1:20:3.96:0,4,242	0/0:28,2:30:8.04:0,8,528	0/0:10,0:10:21.06:0,21,232
chr10	24646194	.	GGATA	G	4962.12	PASS	AB=0.662;AC=35;AF=0.673;AN=52;BaseQRankSum=-1.169;DP=462;FS=8.288;HRun=0;HaplotypeScore=96.4379;InbreedingCoeff=0.5479;MQ=69.03;MQ0=5;MQRankSum=2.189;QD=15.04;ReadPosRankSum=2.290;VQSLOD=3.8472;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:24.08:0,24,523	0/0:6,0:6:9:0,9,162	./.	./.	1/1:10,5:15:12.04:184,12,0	0/1:7,11:19:43.69:304,0,44	1/1:14,8:22:18.06:277,18,0	1/1:32,0:29:0.47:1,0,0	1/1:10,9:19:21.07:323,21,0	1/1:9,6:15:18.03:229,18,0	0/1:7,5:12:58.11:126,0,58	1/1:7,7:14:18.06:276,18,0	1/1:8,8:16:20.97:323,21,0	1/1:4,7:11:21.07:323,21,0	1/1:12,12:24:33.11:507,33,0	1/1:10,11:21:32.98:507,33,0	0/0:11,0:15:6.02:0,6,100	0/0:8,0:10:3.01:0,3,52	0/0:9,0:8:3.01:0,3,52	0/0:10,0:17:14.06:0,14,211	0/0:15,0:15:2.83:0,3,52	1/1:7,6:13:15.05:231,15,0	0/1:7,6:14:24.42:216,0,24	1/1:11,6:17:12.04:185,12,0	1/1:8,2:10:6.02:92,6,0	1/1:10,12:22:33.06:442,33,0	1/1:18,8:26:15.05:231,15,0	1/1:4,4:8:12.04:185,12,0
chr10	24646577	.	AAGTCAGATACTT	A	763.18	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.631;DP=713;FS=11.199;HRun=0;HaplotypeScore=266.9778;InbreedingCoeff=0.9421;MQ=88.20;MQ0=0;MQRankSum=-4.801;QD=42.40;ReadPosRankSum=-0.175;VQSLOD=1.8993;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,11:18:24.08:856,24,0	0/0:6,0:6:9.03:0,9,538	0/0:26,0:26:54.18:0,54,2560	0/0:26,0:27:54.16:0,54,2426	0/0:39,0:39:93.30:0,93,5255	0/0:36,0:36:90.31:0,90,5177	0/0:15,0:15:27.09:0,27,1305	0/0:42,0:42:99:0,102,5026	0/0:28,0:28:66.21:0,66,3705	0/0:39,0:39:93.32:0,93,4987	0/0:20,0:20:51.18:0,51,2999	0/0:31,0:31:81.26:0,81,4239	0/0:26,0:26:72.23:0,72,3972	0/0:34,0:34:90.29:0,90,5201	0/0:23,0:23:57.20:0,57,3290	0/0:32,0:32:84.29:0,84,4910	0/0:26,0:26:66.23:0,66,3736	0/0:14,0:14:33.11:0,33,1855	0/0:17,0:17:45.15:0,45,2434	0/0:24,0:24:57.18:0,57,3147	0/0:33,0:33:87.26:0,87,4511	0/0:20,0:20:57.20:0,57,3280	0/0:27,0:27:69.24:0,69,3686	0/0:19,0:19:45.15:0,45,2627	0/0:18,0:18:42.14:0,42,2487	0/0:28,0:28:72.25:0,72,3901	0/0:28,0:28:78.25:0,78,4256	0/0:17,0:17:48.16:0,48,2778
chr10	24648492	.	CA	C	2801.95	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=10.259;DP=444;FS=9.076;HRun=5;HaplotypeScore=42.8695;InbreedingCoeff=0.9869;MQ=87.39;MQ0=1;MQRankSum=-2.587;QD=28.89;ReadPosRankSum=-0.854;VQSLOD=3.0147;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:72.20:0,72,964	0/0:3,0:3:9.03:0,9,123	0/0:18,0:18:42.14:0,42,564	0/0:22,0:22:25.13:0,25,619	0/0:19,0:19:54.18:0,54,738	0/0:21,0:21:60.19:0,60,805	0/0:11,0:11:33.10:0,33,437	1/1:2,25:26:72.18:799,72,0	0/0:11,0:11:30.10:0,30,410	0/0:17,0:17:36.12:0,36,493	0/0:19,0:19:51.14:0,51,652	0/0:13,0:13:36.12:0,36,492	0/0:18,0:18:45.14:0,45,601	0/0:13,0:13:36.10:0,36,475	0/0:13,0:13:36.11:0,36,477	0/0:16,0:16:48.16:0,48,657	1/1:0,11:11:30.09:340,30,0	1/1:1,13:14:36.10:408,36,0	1/1:1,11:12:36.07:387,36,0	1/1:0,16:16:45.13:510,45,0	1/1:0,17:17:48.14:545,48,0	0/0:10,0:10:30.10:0,30,409	0/0:14,0:14:39.11:0,39,515	0/0:21,0:21:63.21:0,63,862	0/0:11,0:11:30.10:0,30,411	0/0:16,0:16:42.14:0,42,575	0/0:26,0:26:75.25:0,75,1025	0/0:8,0:8:24.08:0,24,328
chr10	24648871	.	A	ATT	5569.56	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-2.416;DP=514;FS=0.000;HRun=10;HaplotypeScore=99.8707;InbreedingCoeff=0.8021;MQ=79.19;MQ0=0;MQRankSum=-5.449;QD=11.60;ReadPosRankSum=4.875;VQSLOD=2.3609;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,0:14:33.02:314,33,0	1/1:1,0:5:9.98:35,10,0	0/0:17,0:17:32.86:0,33,275	0/0:17,0:17:16.43:0,16,180	1/1:3,1:29:60.78:252,61,0	1/1:1,1:21:45.43:194,45,0	1/1:1,0:9:17.47:61,17,0	1/1:10,13:24:45.10:606,45,0	1/1:0,0:21:22.23:79,22,0	1/1:4,0:19:37.92:145,38,0	1/1:4,0:19:33.38:136,33,0	1/1:4,0:23:34.93:123,35,0	1/1:2,0:22:49.91:175,50,0	1/1:1,0:17:18.45:103,18,0	1/1:4,0:18:32.44:114,32,0	1/1:3,0:28:59.89:210,60,0	1/1:1,6:7:21.07:309,21,0	1/1:1,8:10:11.53:143,12,0	1/1:7,9:19:15.08:511,15,0	1/1:2,17:20:50.61:699,51,0	1/1:0,8:9:27.08:386,27,0	1/1:1,1:10:22.97:115,23,0	1/1:4,0:18:3.15:79,3,0	1/1:1,2:11:20.99:142,21,0	1/1:3,1:29:39.57:204,40,0	1/1:3,0:24:41.84:165,42,0	1/1:9,0:38:14.89:185,15,0	1/1:1,0:15:4.93:83,5,0
chr10	24649733	.	C	CAAAAAA	12252.57	PASS	AB=0.971;AC=54;AF=0.964;AN=56;BaseQRankSum=-0.699;DP=630;FS=5.219;HRun=15;HaplotypeScore=163.7427;InbreedingCoeff=0.1819;MQ=71.86;MQ0=2;MQRankSum=-2.373;QD=19.45;ReadPosRankSum=-0.596;VQSLOD=1.8299;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:23:28.65:632,29,0	1/1:3,0:7:11.78:231,12,0	0/1:31,0:20:2:2,0,20	0/1:17,0:14:32.10:32,0,37	1/1:16,0:36:66.42:932,66,0	1/1:9,0:23:19.86:400,20,0	1/1:13,0:15:15.03:284,15,0	1/1:10,0:22:39.05:366,39,0	1/1:17,1:18:17.42:350,17,0	1/1:22,0:23:45.08:718,45,0	1/1:16,0:31:56.37:839,56,0	1/1:7,0:13:23.44:454,23,0	1/1:16,0:31:30.07:583,30,0	1/1:17,0:14:33.07:621,33,0	1/1:13,0:27:24.06:443,24,0	1/1:6,9:23:14.92:302,15,0	1/1:6,0:20:9.03:154,9,0	1/1:7,0:17:18.06:417,18,0	1/1:15,9:23:36.12:725,36,0	1/1:16,0:31:56.04:854,56,0	1/1:4,0:14:10.25:141,10,0	1/1:14,0:24:27.04:428,27,0	1/1:6,4:16:11.95:219,12,0	1/1:8,0:25:2.77:304,3,0	1/1:17,0:28:38.09:662,38,0	1/1:28,0:26:50.12:731,50,0	1/1:29,0:29:18.05:317,18,0	1/1:6,0:6:7.27:112,7,0
chr10	24651184	.	TTCCCCGAG	T	5718.26	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=12.002;DP=494;FS=8.016;HRun=0;HaplotypeScore=127.0147;InbreedingCoeff=0.9793;MQ=77.27;MQ0=0;MQRankSum=-9.340;QD=53.44;ReadPosRankSum=-1.077;VQSLOD=3.6399;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,111,3607	0/0:5,0:5:12.04:0,12,528	0/0:14,0:14:33.06:0,33,1143	0/0:15,0:14:36.59:0,37,1484	0/0:22,0:22:60.19:0,60,2388	0/0:21,0:21:51.18:0,51,2236	0/0:16,0:16:45.15:0,45,1825	1/1:1,15:16:45.14:1096,45,0	0/0:10,0:9:21.03:0,21,811	0/0:16,0:15:42.14:0,42,1786	0/0:17,0:17:30.10:0,30,1317	0/0:26,0:26:68.73:0,69,2922	0/0:23,0:23:57.04:0,57,2195	0/0:21,0:21:51.12:0,51,1952	0/0:19,0:19:45.14:0,45,1850	0/0:20,0:20:51.13:0,51,2112	1/1:6,22:27:48.16:1297,48,0	1/1:1,11:12:27.09:755,27,0	1/1:1,20:21:60.17:1503,60,0	1/1:1,19:18:38.96:814,39,0	1/1:2,8:10:9.50:252,10,0	0/0:6,0:6:18.06:0,18,769	0/0:16,0:16:39.13:0,39,1672	0/0:15,0:15:45.15:0,45,1920	0/0:13,0:13:33.11:0,33,1432	0/0:25,0:25:75.24:0,75,2944	0/0:19,0:19:51.06:0,51,1897	0/0:10,0:10:21.07:0,21,924
chr10	24651309	.	C	CT	5685.14	PASS	AB=0.852;AC=39;AF=0.696;AN=56;BaseQRankSum=-12.202;DP=454;FS=18.002;HRun=10;HaplotypeScore=63.1287;InbreedingCoeff=0.7761;MQ=70.87;MQ0=9;MQRankSum=4.010;QD=17.55;ReadPosRankSum=1.509;VQSLOD=3.8112;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:41.92:0,42,342	1/1:3,7:8:18.03:192,18,0	0/1:17,0:13:15.46:15,0,107	0/1:16,0:14:0.98:1,0,20	1/1:3,21:24:31.40:321,31,0	1/1:7,9:16:35.93:345,36,0	1/1:3,7:10:21.05:224,21,0	0/0:4,0:25:35.43:0,35,101	1/1:4,11:13:30.08:320,30,0	1/1:3,8:11:24.06:256,24,0	1/1:0,18:19:15.03:160,15,0	1/1:1,12:13:33.08:352,33,0	1/1:2,13:15:23.85:255,24,0	1/1:4,10:13:24.02:244,24,0	1/1:1,14:15:39.10:416,39,0	1/1:0,14:14:39.10:416,39,0	0/0:3,0:24:36.17:0,36,104	0/0:2,0:16:19.76:0,20,58	0/0:4,0:18:20.35:0,20,64	0/0:3,0:15:20.15:0,20,57	0/0:0,0:9:18.11:0,18,52	1/1:2,10:12:18.05:192,18,0	1/1:4,11:16:14.87:140,15,0	1/1:0,8:7:18.05:192,18,0	1/1:5,11:15:19.86:197,20,0	1/1:4,29:32:84.10:849,84,0	1/1:6,16:22:10.30:487,10,0	0/1:1,4:5:9.61:113,0,10
chr10	24651744	.	AT	A	1187.74	PASS	AB=0.868;AC=15;AF=0.313;AN=48;BaseQRankSum=9.542;DP=530;FS=12.205;HRun=1;HaplotypeScore=81.6607;InbreedingCoeff=-0.0672;MQ=63.92;MQ0=20;MQRankSum=-2.753;QD=4.29;ReadPosRankSum=2.211;VQSLOD=-0.7268;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:23:6.30:6,0,270	0/1:7,1:8:15.34:15,0,235	0/0:25,0:20:26.39:0,26,396	0/0:23,1:17:14.31:0,14,271	0/1:24,3:27:38.72:39,0,736	0/0:23,0:22:36.12:0,36,502	0/0:23,0:22:57.11:0,57,775	./.	0/1:25,4:29:61.46:61,0,460	0/0:26,2:25:5.51:0,6,883	0/1:22,11:30:99:215,0,455	0/1:12,1:13:15.45:15,0,234	0/1:17,5:22:99:124,0,474	0/1:29,5:33:81.62:82,0,457	0/0:28,0:28:54.85:0,55,685	0/0:16,0:16:27.09:0,27,375	1/1:2,17:15:27.08:317,27,0	1/1:3,16:10:27.08:320,27,0	./.	./.	./.	0/1:8,2:9:57.52:58,0,149	0/1:22,2:22:18:18,0,587	0/1:11,5:14:74.35:74,0,307	0/0:25,1:25:31.81:0,32,781	0/0:24,0:24:63.12:0,63,831	0/0:22,0:22:36.12:0,36,500	0/0:10,0:10:30.10:0,30,428
chr10	24653236	.	G	GT	233.73	PASS	AB=1.000;AC=9;AF=0.188;AN=48;BaseQRankSum=0.161;DP=475;FS=1.342;HRun=5;HaplotypeScore=59.7735;InbreedingCoeff=0.7692;MQ=47.52;MQ0=27;MQRankSum=-3.579;QD=7.54;ReadPosRankSum=0.723;VQSLOD=-0.3337;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,4:4:12:138,12,0	0/0:17,0:16:48.12:0,48,515	0/1:12,0:6:4.65:5,0,129	./.	0/0:29,0:27:72.18:0,72,772	0/0:15,0:14:30.08:0,30,322	0/0:26,0:25:72.18:0,72,773	./.	0/0:25,0:25:60.15:0,60,644	0/0:21,0:20:60.14:0,60,638	0/0:17,0:16:45.11:0,45,483	0/0:24,0:24:62.92:0,63,676	0/0:37,0:37:90.22:0,90,965	0/0:21,0:20:51.13:0,51,548	0/0:26,0:25:63.16:0,63,676	0/0:24,0:21:57.14:0,57,611	1/1:3,4:4:3.01:39,3,0	1/1:2,0:2:3:27,3,0	1/1:1,5:4:12.04:158,12,0	./.	./.	0/0:20,0:20:57.14:0,57,612	0/0:20,0:17:45.11:0,45,482	0/0:12,0:12:30.08:0,30,322	0/0:25,0:25:75.19:0,75,805	0/0:27,0:24:69.17:0,69,742	0/0:23,0:22:63.16:0,63,676	0/0:12,0:11:33.08:0,33,355
chr10	24655223	.	AACATACAC	A	4551.51	PASS	AB=0.997;AC=33;AF=0.589;AN=56;BaseQRankSum=12.688;DP=564;FS=0.000;HRun=0;HaplotypeScore=183.5358;InbreedingCoeff=-0.4021;MQ=63.04;MQ0=6;MQRankSum=-8.632;QD=9.12;ReadPosRankSum=-0.309;VQSLOD=3.7795;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:26:2.76:168,3,0	1/1:7,0:7:15.01:176,15,0	0/0:31,0:22:34.05:0,34,406	0/0:21,0:17:0.35:0,0,212	0/1:23,0:23:62.97:204,0,63	0/1:25,0:25:99:188,0,164	0/0:13,0:13:17:0,17,194	0/1:22,0:21:59.51:317,0,60	0/1:20,0:20:79.85:323,0,80	0/1:29,0:28:99:202,0,249	0/1:19,0:19:13.13:13,0,148	0/1:18,0:18:99:170,0,150	0/1:23,0:23:99:221,0,160	0/1:19,0:20:99:116,0,257	0/1:34,0:34:99:233,0,200	0/1:16,0:16:66.05:66,0,273	1/1:0,11:11:6.02:168,6,0	1/1:1,11:12:9.03:253,9,0	1/1:2,0:10:22.20:225,22,0	1/1:3,16:19:2.92:17,3,0	1/1:2,14:16:3.01:40,3,0	0/1:31,0:31:99:303,0,236	0/1:10,0:10:61.84:62,0,67	0/1:22,0:20:90.42:185,0,90	0/1:28,0:28:99:260,0,264	0/1:17,0:17:97.69:98,0,239	0/1:32,0:32:99:373,0,271	1/1:9,0:9:0.06:173,0,0
chr10	24655227	.	TACACACACAC	T	9464.75	PASS	AB=0.692;AC=43;AF=0.827;AN=52;BaseQRankSum=1.395;DP=560;FS=0.000;HRun=0;HaplotypeScore=185.2168;InbreedingCoeff=0.5982;MQ=61.79;MQ0=8;MQRankSum=-2.584;QD=22.01;ReadPosRankSum=3.696;VQSLOD=3.8003;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:20.98:0,21,322	1/1:0,6:7:15.05:390,15,0	./.	0/0:20,0:16:2.98:0,3,22	1/1:6,17:23:24.08:547,24,0	1/1:11,12:24:18.06:516,18,0	1/1:13,0:13:3.01:73,3,0	0/0:24,0:21:18.06:0,18,580	1/1:8,10:18:27.09:789,27,0	1/1:14,14:27:36:721,36,0	1/1:7,11:19:2.93:86,3,0	1/1:8,9:17:14.41:444,14,0	1/1:9,14:25:17.58:514,18,0	1/1:16,5:21:15.05:389,15,0	1/1:14,19:34:24.08:665,24,0	1/1:12,4:17:9.03:248,9,0	1/1:11,0:11:6.01:60,6,0	1/1:11,0:11:9.02:124,9,0	1/1:9,0:8:1.22:2,1,0	./.	0/0:16,0:16:5.75:0,6,105	1/1:15,17:32:26.82:802,27,0	1/1:4,7:11:6.49:180,6,0	1/1:15,7:20:15.52:416,16,0	1/1:16,13:29:24.08:708,24,0	0/1:10,8:18:66.72:342,0,67	1/1:19,11:31:11.75:1004,12,0	1/1:1,8:9:15.05:446,15,0
chr10	24655953	.	TA	T	17504.76	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-0.914;DP=762;FS=0.597;HRun=8;HaplotypeScore=82.2608;InbreedingCoeff=0.9988;MQ=77.76;MQ0=0;MQRankSum=-5.064;QD=24.79;ReadPosRankSum=3.885;VQSLOD=5.4137;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:57.16:0,57,677	1/1:1,8:9:24.04:232,24,0	0/0:16,0:16:30.75:0,31,362	0/0:17,0:17:31.11:0,31,304	1/1:1,33:34:99:956,99,0	1/1:1,24:25:69.11:666,69,0	1/1:0,23:23:66.11:637,66,0	1/1:3,28:31:84.13:811,84,0	1/1:4,29:33:84.13:811,84,0	1/1:4,31:35:93.15:898,93,0	1/1:1,25:26:75.12:724,75,0	1/1:5,26:31:72.11:695,72,0	1/1:5,23:28:60.09:579,60,0	1/1:0,31:31:93.15:898,93,0	1/1:4,43:47:99:1043,108,0	1/1:3,35:38:99:1014,105,0	1/1:4,21:25:63.10:608,63,0	1/1:3,11:14:30.05:290,30,0	1/1:4,22:26:66.04:621,66,0	1/1:8,29:37:84.12:811,84,0	1/1:1,22:23:63.10:608,63,0	1/1:2,15:17:42.06:406,42,0	1/1:1,22:23:60.10:580,60,0	1/1:3,19:22:51.08:493,51,0	1/1:2,20:22:51.08:493,51,0	1/1:1,28:29:84.11:804,84,0	1/1:9,44:53:99:1159,120,0	1/1:1,23:24:69.11:666,69,0
chr10	24656277	.	T	TC	23829.07	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-5.323;DP=674;FS=0.572;HRun=2;HaplotypeScore=82.8581;InbreedingCoeff=0.9970;MQ=87.36;MQ0=0;MQRankSum=-10.201;QD=38.13;ReadPosRankSum=6.714;VQSLOD=4.5854;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,12:12:36.12:518,36,0	1/1:0,14:14:33.11:473,33,0	0/0:25,0:25:72.21:0,72,867	0/0:24,0:24:63.13:0,63,743	1/1:1,40:41:99:1643,117,0	1/1:0,28:28:78.26:1123,78,0	1/1:0,8:8:21.07:302,21,0	1/1:2,33:35:99:1379,102,0	1/1:0,15:15:39.13:561,39,0	1/1:2,29:31:87.25:1212,87,0	1/1:1,30:31:90.30:1288,90,0	1/1:1,24:25:57.19:820,57,0	1/1:1,29:30:81.27:1166,81,0	1/1:0,21:21:60.20:860,60,0	1/1:3,27:30:75.25:1075,75,0	1/1:0,28:28:78.26:1123,78,0	1/1:0,24:24:63.21:907,63,0	1/1:0,13:13:33.07:452,33,0	1/1:2,19:21:57.19:807,57,0	1/1:1,36:37:96.32:1372,96,0	1/1:0,11:11:27.09:389,27,0	1/1:1,17:18:51.17:734,51,0	1/1:0,23:23:60.20:864,60,0	1/1:1,21:22:60.20:863,60,0	1/1:1,27:28:72.24:1036,72,0	1/1:3,21:24:64.44:878,64,0	1/1:1,38:39:92.97:1338,93,0	1/1:0,16:16:45.15:648,45,0
chr10	24656876	.	AGCCGCC	A	7367.10	PASS	AB=0.832;AC=26;AF=0.464;AN=56;BaseQRankSum=16.980;DP=873;FS=87.200;HRun=0;HaplotypeScore=346.8436;InbreedingCoeff=-0.8655;MQ=66.04;MQ0=0;MQRankSum=-13.141;QD=9.02;ReadPosRankSum=3.079;VQSLOD=-0.0837;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:32,10:41:99:551,0,1612	0/1:8,1:10:90.13:90,0,395	0/0:28,1:29:31.65:0,32,1843	0/0:26,0:25:31.96:0,32,1739	0/1:22,7:29:99:217,0,1408	0/1:13,7:20:99:438,0,1006	0/1:32,7:39:77.95:78,0,1869	0/1:31,2:33:54.61:55,0,1825	0/1:33,8:41:99:490,0,2589	0/1:21,3:24:99:138,0,1375	0/1:9,2:11:53.05:53,0,803	0/1:34,10:44:99:594,0,2320	0/1:43,5:48:75.14:75,0,2967	0/1:37,3:40:99:220,0,2642	0/1:41,14:55:99:858,0,2893	0/1:24,9:33:99:537,0,2132	0/1:14,9:23:99:362,0,759	0/1:21,4:25:99:259,0,1280	0/1:23,4:27:99:222,0,1289	0/1:21,3:23:90.16:90,0,1288	0/1:53,14:67:99:255,0,2061	0/1:13,5:18:99:305,0,983	0/1:16,3:19:99:155,0,788	0/1:45,17:62:99:257,0,2962	0/1:20,1:21:16.86:17,0,1332	0/1:16,7:23:99:439,0,1027	0/1:24,9:33:99:555,0,1739	0/1:4,2:6:55.75:56,0,373
chr10	24656935	.	ACAACC	A	6131.67	PASS	AB=0.845;AC=23;AF=0.411;AN=56;BaseQRankSum=16.730;DP=1165;FS=2.834;HRun=0;HaplotypeScore=586.5506;InbreedingCoeff=-0.6907;MQ=50.80;MQ0=1;MQRankSum=-13.642;QD=6.52;ReadPosRankSum=11.710;VQSLOD=-0.2006;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:32,3:34:11.66:12,0,1063	0/1:9,5:14:99:160,0,490	0/0:40,0:37:99:0,108,2755	0/0:28,0:25:39.76:0,40,2026	0/1:34,11:45:99:293,0,1385	0/1:32,6:38:99:131,0,1890	0/1:47,4:51:99:154,0,2066	0/0:57,0:57:93.26:0,93,2914	0/1:40,16:56:99:654,0,1671	0/1:31,12:43:99:587,0,1764	0/1:17,1:17:56.13:56,0,322	0/1:46,11:57:99:445,0,2075	0/1:56,10:66:99:467,0,2205	0/1:53,10:63:99:434,0,1852	0/1:62,9:70:99:440,0,3381	0/1:36,20:56:99:713,0,2158	0/1:32,4:36:99:174,0,1827	0/1:37,3:40:99:151,0,2354	0/0:29,1:29:7.29:0,7,1434	0/1:9,5:14:99:110,0,308	0/0:68,0:69:80.59:0,81,2827	0/1:17,9:26:99:218,0,900	0/1:18,5:23:99:121,0,707	0/1:69,5:74:5.80:6,0,3048	0/1:15,10:25:99:188,0,619	0/1:28,5:33:99:200,0,1639	0/1:43,10:53:99:397,0,2718	0/1:3,0:3:21.01:21,0,54
chr10	24657206	.	C	CATAG	31657.34	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-6.624;DP=554;FS=2.292;HRun=0;HaplotypeScore=80.8515;InbreedingCoeff=0.9859;MQ=70.70;MQ0=7;MQRankSum=-7.184;QD=59.62;ReadPosRankSum=5.022;VQSLOD=6.6268;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,11:17:29.78:791,30,0	1/1:1,13:14:39.13:1027,39,0	0/0:11,0:11:24.07:0,24,400	0/0:12,0:12:28.99:0,29,363	1/1:2,26:28:72.25:1891,72,0	1/1:3,25:28:72.25:1873,72,0	1/1:0,10:11:27.09:713,27,0	1/1:13,18:32:66.20:1564,66,0	1/1:1,15:16:45.15:1183,45,0	1/1:6,17:24:54.09:1308,54,0	1/1:0,16:18:36.12:923,36,0	1/1:2,19:20:54.19:1420,54,0	1/1:5,12:17:36.12:950,36,0	1/1:1,18:18:42.14:1108,42,0	1/1:0,19:19:51.18:1345,51,0	1/1:2,22:22:54.19:1421,54,0	1/1:2,21:22:60.21:1574,60,0	1/1:3,13:16:39.13:1030,39,0	1/1:6,19:24:66.21:1631,66,0	1/1:1,16:17:42.14:1105,42,0	1/1:1,10:11:27.09:713,27,0	1/1:1,16:17:48.16:1265,48,0	1/1:1,12:13:24.08:632,24,0	1/1:4,10:13:21.07:555,21,0	1/1:1,26:25:54.19:1421,54,0	1/1:6,25:33:78.19:1859,78,0	1/1:5,31:35:75.26:1959,75,0	1/1:3,5:8:15.05:396,15,0
chr10	24657299	.	T	TAG	4257.83	PASS	AB=1.000;AC=44;AF=0.846;AN=52;BaseQRankSum=-0.676;DP=348;FS=2.507;HRun=0;HaplotypeScore=107.1499;InbreedingCoeff=0.2510;MQ=68.29;MQ0=7;MQRankSum=-1.333;QD=14.48;ReadPosRankSum=5.761;VQSLOD=4.8462;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:14:4.31:21,4,0	1/1:0,9:9:11.91:198,12,0	0/0:19,0:5:5.33:0,5,34	0/0:33,0:22:8.41:0,8,140	1/1:9,15:23:23.81:407,24,0	1/1:1,13:14:11.73:203,12,0	1/1:1,7:5:8.86:153,9,0	0/1:33,0:29:3.03:3,0,136	1/1:2,5:7:11.40:160,11,0	1/1:6,10:15:32.15:502,32,0	1/1:6,17:23:23.69:408,24,0	1/1:2,1:3:3.01:36,3,0	1/1:3,11:14:23.78:399,24,0	1/1:5,5:10:11.91:204,12,0	1/1:2,4:6:2.88:51,3,0	1/1:1,3:4:5.85:102,6,0	0/1:14,0:14:35.51:36,0,64	0/1:10,0:10:20.57:21,0,29	0/1:15,0:14:18.82:19,0,59	1/1:12,0:10:3.66:18,4,0	1/1:4,0:4:0.89:2,1,0	./.	1/1:4,4:8:9.03:153,9,0	./.	1/1:3,10:13:8.73:144,9,0	1/1:4,13:16:40.49:649,40,0	1/1:4,7:11:14.49:251,14,0	1/1:2,2:4:8.96:120,9,0
chr10	24657301	.	T	TAG	6914.23	PASS	AC=48;AF=0.923;AN=52;BaseQRankSum=-3.969;DP=345;FS=0.000;HRun=0;HaplotypeScore=96.5612;InbreedingCoeff=0.4901;MQ=65.27;MQ0=7;MQRankSum=0.598;QD=23.68;ReadPosRankSum=3.751;VQSLOD=5.4829;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,3:14:5.76:69,6,0	1/1:9,0:9:11.91:198,12,0	0/0:19,0:5:5.57:0,6,30	0/0:30,0:20:12.09:0,12,110	1/1:24,0:23:23.91:408,24,0	1/1:14,0:14:11.73:203,12,0	1/1:8,0:5:8.86:153,9,0	1/1:4,29:28:78.23:1281,78,0	1/1:7,0:7:11.91:166,12,0	1/1:17,0:16:21.10:465,21,0	1/1:23,0:23:23.69:407,24,0	1/1:2,0:2:3.01:36,3,0	1/1:14,0:14:23.78:406,24,0	1/1:9,0:9:12.04:204,12,0	1/1:6,0:6:2.88:51,3,0	1/1:4,0:4:5.85:102,6,0	1/1:9,5:14:23.95:399,24,0	1/1:8,3:11:11.87:347,12,0	1/1:9,7:15:39.06:569,39,0	1/1:7,6:11:5.89:104,6,0	1/1:3,1:4:3.01:52,3,0	./.	1/1:7,0:7:9.03:153,9,0	./.	1/1:13,0:13:8.73:142,9,0	1/1:16,0:15:39.13:646,39,0	1/1:9,0:9:14.99:251,15,0	1/1:4,0:4:6.02:102,6,0
chr10	24657308	.	AT	A	837.20	PASS	AB=0.945;AC=36;AF=0.692;AN=52;BaseQRankSum=-0.411;DP=310;FS=0.000;HRun=1;HaplotypeScore=100.6655;InbreedingCoeff=0.0714;MQ=63.50;MQ0=7;MQRankSum=1.617;QD=3.22;ReadPosRankSum=-1.668;VQSLOD=-0.7295;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,2:13:2.43:10,2,0	1/1:9,0:9:7.91:26,8,0	0/0:17,0:4:5.92:0,6,29	0/0:26,0:18:11.80:0,12,175	0/1:16,5:20:13.14:34,0,13	0/1:14,0:14:1.51:2,0,20	0/1:8,0:5:0.80:1,0,22	0/1:31,0:26:61.31:133,0,61	0/1:6,0:6:16.15:16,0,17	0/1:12,0:11:12.79:78,0,13	1/1:17,1:18:3.14:46,3,0	0/0:2,0:2:3:0,3,32	1/1:12,0:12:19.83:74,20,0	0/1:6,2:8:7.46:7,0,15	1/1:4,1:5:2.37:9,2,0	1/1:3,0:3:4.83:18,5,0	1/1:8,4:12:20.58:107,21,0	1/1:4,5:9:21.27:118,21,0	0/1:13,3:15:73.46:96,0,73	1/1:11,3:12:5.06:20,5,0	1/1:5,0:5:2.60:10,3,0	./.	1/1:5,2:7:7.49:27,7,0	./.	0/1:12,0:12:9.17:42,0,9	1/1:13,1:13:12.42:72,12,0	1/1:7,1:8:11.56:39,12,0	0/1:2,0:2:3.64:4,0,11
chr10	24657329	.	AGATAGATAGAT	A	2423.82	PASS	AB=0.931;AC=37;AF=0.771;AN=48;BaseQRankSum=-1.772;DP=319;FS=0.000;HRun=0;HaplotypeScore=160.3925;InbreedingCoeff=0.1754;MQ=43.17;MQ0=8;MQRankSum=-1.303;QD=9.66;ReadPosRankSum=-0.009;VQSLOD=2.5870;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:17,0:16:39.85:40,0,43	1/1:8,0:8:8.92:137,9,0	./.	./.	0/0:23,0:22:0.94:0,1,2	1/1:17,0:17:5.85:63,6,0	1/1:11,0:8:6:52,6,0	1/1:9,0:6:3.01:46,3,0	1/1:9,0:9:3.25:47,3,0	1/1:15,0:14:36.96:441,37,0	1/1:17,0:17:2.85:28,3,0	0/0:4,0:4:0.47:0,0,1	1/1:10,0:10:11.60:145,12,0	1/1:9,0:9:8.48:80,8,0	./.	0/0:4,0:4:3.01:0,3,42	1/1:11,0:11:3.01:46,3,0	1/1:6,0:6:12.04:183,12,0	1/1:14,0:13:21.06:302,21,0	0/1:10,11:19:0:0,0,0	0/1:7,0:7:17.98:40,0,18	./.	1/1:9,0:9:2.58:27,3,0	1/1:2,0:2:3:28,3,0	0/1:15,0:15:0:0,0,0	1/1:21,0:20:30.29:544,30,0	1/1:12,0:12:16.92:162,17,0	0/1:11,0:10:3.63:123,0,4
chr10	24657332	.	TA	T	525.11	PASS	AB=0.882;AC=12;AF=0.250;AN=48;BaseQRankSum=1.532;DP=316;FS=2.757;HRun=1;HaplotypeScore=147.3668;InbreedingCoeff=-0.1278;MQ=38.59;MQ0=6;MQRankSum=-0.897;QD=4.38;ReadPosRankSum=-2.474;VQSLOD=-0.4307;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:16:3.01:0,3,46	0/0:8,0:8:9.03:0,9,138	./.	0/0:10,0:5:5.75:0,6,45	0/0:17,6:22:12.02:0,12,166	0/0:17,0:17:9.03:0,9,142	0/1:9,2:8:27.82:28,0,84	0/0:10,0:8:21.17:0,21,293	0/0:9,0:9:1.95:0,2,42	0/1:14,0:13:99:124,0,231	0/1:17,1:18:5.29:5,0,132	0/0:4,0:4:3:0,3,48	0/1:11,0:11:69.19:70,0,69	0/1:7,3:10:44.20:44,0,81	./.	0/0:5,0:5:6.01:0,6,64	0/0:9,2:11:3.01:0,3,45	0/0:5,0:5:15.05:0,15,224	0/0:12,0:11:30.10:0,30,461	./.	0/0:7,0:7:9.03:0,9,140	./.	1/1:8,1:9:2.89:20,3,0	1/1:1,1:2:2.97:20,3,0	0/0:15,0:15:2.84:0,3,48	0/1:20,3:22:99:178,0,399	0/1:11,0:11:50.86:51,0,88	0/1:4,7:10:76.60:117,0,77
chr10	24657336	.	TA	T	416.21	PASS	AB=0.766;AC=11;AF=0.220;AN=50;BaseQRankSum=1.805;DP=313;FS=0.000;HRun=1;HaplotypeScore=145.7447;InbreedingCoeff=-0.0358;MQ=39.03;MQ0=5;MQRankSum=-0.053;QD=3.93;ReadPosRankSum=1.378;VQSLOD=0.2120;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:16:8.83:0,9,76	0/0:8,0:8:8.87:0,9,58	./.	0/0:8,0:3:2.92:0,3,17	0/0:22,0:21:11.99:0,12,138	0/0:9,7:16:9.02:0,9,117	0/1:10,1:8:31.77:32,0,80	0/0:12,0:11:32.95:0,33,367	0/0:4,5:9:1.86:0,2,16	0/1:7,7:13:73.50:112,0,73	0/1:13,3:16:13.26:13,0,49	0/0:4,1:5:3.89:0,4,50	0/1:6,5:11:16.14:63,0,16	0/1:8,2:10:50.13:50,0,54	0/0:7,4:11:0.88:0,1,2	0/0:6,0:6:9.02:0,9,102	0/0:9,0:9:2.92:0,3,17	0/0:5,0:5:11.84:0,12,78	0/0:14,0:12:35.72:0,36,279	./.	0/0:6,0:6:8.99:0,9,94	./.	1/1:4,4:8:2.91:22,3,0	1/1:2,0:2:2.98:22,3,0	0/0:14,2:16:5.74:0,6,64	0/1:16,7:22:99:172,0,172	0/1:5,6:11:26.37:62,0,26	0/0:12,0:11:14.24:0,14,112
chr10	24657337	.	AGAT	A	3207.62	PASS	AB=0.980;AC=43;AF=0.860;AN=50;BaseQRankSum=1.445;DP=312;FS=2.972;HRun=0;HaplotypeScore=138.8336;InbreedingCoeff=0.2657;MQ=39.01;MQ0=5;MQRankSum=-0.258;QD=11.75;ReadPosRankSum=3.060;VQSLOD=3.0802;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:16:5.01:90,5,0	1/1:7,0:7:8.90:137,9,0	./.	./.	1/1:22,0:21:5.55:91,6,0	1/1:16,0:16:6.01:63,6,0	1/1:10,2:9:8.83:81,9,0	0/1:11,0:10:27.81:28,0,131	1/1:9,0:9:3.48:47,3,0	1/1:15,0:14:12.66:438,13,0	0/1:15,1:16:1.13:24,0,1	1/1:4,1:5:3.01:46,3,0	1/1:11,0:11:17.89:199,18,0	1/1:7,3:10:11.73:110,12,0	1/1:8,3:11:3.01:46,3,0	0/0:6,0:6:9.03:0,9,126	1/1:10,0:10:3.01:46,3,0	1/1:5,0:5:12.04:184,12,0	1/1:13,0:11:30.09:439,30,0	0/1:21,0:19:0:0,0,0	1/1:7,0:7:7.27:95,7,0	./.	1/1:7,1:8:2.70:28,3,0	1/1:1,1:2:3:28,3,0	0/0:16,0:16:3.01:0,3,41	1/1:19,3:21:41.59:654,42,0	1/1:11,0:11:17.25:178,17,0	1/1:12,0:11:18.06:274,18,0
chr10	24657340	.	T	TA	3740.23	PASS	AB=0.923;AC=43;AF=0.896;AN=48;BaseQRankSum=1.805;DP=311;FS=0.000;HRun=1;HaplotypeScore=126.7865;InbreedingCoeff=0.2955;MQ=40.01;MQ0=3;MQRankSum=0.012;QD=14.61;ReadPosRankSum=2.742;VQSLOD=3.4252;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,15:16:7.84:93,8,0	1/1:0,7:7:8.73:139,9,0	./.	./.	1/1:3,17:19:15.02:181,15,0	1/1:1,14:15:5.84:63,6,0	1/1:4,8:9:9:81,9,0	0/1:11,1:11:99:114,0,139	1/1:1,8:9:2.86:46,3,0	1/1:2,14:15:27.21:489,27,0	1/1:3,12:15:3.62:50,4,0	1/1:2,2:4:3.01:46,3,0	1/1:2,10:12:21.04:245,21,0	1/1:6,4:10:12.01:110,12,0	1/1:3,8:11:3.01:46,3,0	0/0:6,1:7:12.04:0,12,166	1/1:0,11:11:3.01:47,3,0	1/1:1,4:5:12.04:182,12,0	1/1:5,9:12:15.20:418,15,0	./.	1/1:0,7:7:9.03:136,9,0	./.	1/1:1,7:8:2.79:28,3,0	1/1:1,1:2:3:28,3,0	0/0:4,11:15:3.01:0,3,41	1/1:7,16:22:47.62:736,48,0	1/1:3,10:13:18.01:197,18,0	1/1:2,11:12:18.06:265,18,0
chr10	24659073	.	T	TA	15389.12	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-8.328;DP=592;FS=10.681;HRun=8;HaplotypeScore=49.8803;InbreedingCoeff=0.9024;MQ=76.94;MQ0=0;MQRankSum=-5.670;QD=27.58;ReadPosRankSum=3.362;VQSLOD=4.9196;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:7:15.01:0,15,137	1/1:1,10:11:30.05:331,30,0	0/0:10,0:10:27:0,27,240	0/0:17,0:17:29.38:0,29,321	1/1:6,21:26:63.19:726,63,0	1/1:3,24:27:69.21:796,69,0	1/1:2,10:12:5.63:319,6,0	1/1:6,28:34:84.22:950,84,0	1/1:3,17:20:48.14:554,48,0	1/1:5,18:23:54.12:593,54,0	1/1:1,28:29:75.18:851,75,0	1/1:2,21:23:63.19:727,63,0	1/1:6,24:30:54.16:623,54,0	1/1:3,23:26:54.16:623,54,0	1/1:1,29:30:81.24:935,81,0	1/1:4,20:24:54.14:623,54,0	1/1:4,19:23:54.12:608,54,0	1/1:1,9:10:27.08:309,27,0	1/1:6,8:14:3.61:249,4,0	1/1:3,33:35:96.29:1108,96,0	1/1:1,7:9:23.90:257,24,0	1/1:2,14:16:39.12:450,39,0	1/1:5,15:20:45.13:519,45,0	1/1:2,11:13:30.09:346,30,0	1/1:3,19:22:54.16:623,54,0	1/1:2,27:29:81.21:914,81,0	1/1:5,25:29:47.76:803,48,0	1/1:4,16:20:46.79:552,47,0
chr10	24659401	.	G	GTT	13925.27	PASS	AB=0.950;AC=54;AF=0.964;AN=56;BaseQRankSum=-3.368;DP=436;FS=2.018;HRun=8;HaplotypeScore=49.0712;InbreedingCoeff=0.2504;MQ=66.11;MQ0=0;MQRankSum=-0.221;QD=31.94;ReadPosRankSum=1.794;VQSLOD=4.6573;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,0:7:15.03:157,15,0	1/1:3,10:14:32.60:482,33,0	0/1:8,0:6:18.75:19,0,76	0/1:4,0:3:0:0,0,0	1/1:5,20:27:65.63:927,66,0	1/1:2,17:19:42.14:667,42,0	1/1:2,6:8:16.61:242,17,0	1/1:7,0:32:63.98:259,64,0	1/1:2,13:15:39.13:619,39,0	1/1:3,19:23:59.67:889,60,0	1/1:4,17:21:42.10:639,42,0	1/1:2,10:12:36.06:520,36,0	1/1:1,12:16:42.11:621,42,0	1/1:1,14:16:30.10:476,30,0	1/1:1,10:12:23.57:342,24,0	1/1:1,15:17:44.64:675,45,0	1/1:1,10:12:27.09:421,27,0	1/1:1,5:6:6.02:95,6,0	1/1:5,16:21:48.16:758,48,0	1/1:6,20:26:59.57:913,60,0	1/1:2,3:5:9.03:143,9,0	1/1:0,6:8:23.95:298,24,0	1/1:1,15:16:39.13:619,39,0	1/1:1,8:9:18.06:286,18,0	1/1:3,12:18:29.07:398,29,0	1/1:6,17:23:54.05:825,54,0	1/1:3,19:22:54.18:857,54,0	1/1:0,16:18:53.15:779,53,0
chr10	24659747	.	CA	C	5738.58	PASS	AB=0.860;AC=39;AF=0.696;AN=56;BaseQRankSum=2.272;DP=532;FS=5.343;HRun=12;HaplotypeScore=70.0772;InbreedingCoeff=0.7325;MQ=75.82;MQ0=4;MQRankSum=-3.337;QD=15.68;ReadPosRankSum=3.768;VQSLOD=5.9276;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:1,0:14:22.73:0,23,114	1/1:1,10:11:26.89:209,27,0	0/0:36,0:18:28.91:0,29,225	0/0:30,1:16:5.69:0,6,75	1/1:2,17:19:44.80:348,45,0	1/1:2,19:22:46.86:354,47,0	1/1:2,8:10:20.92:162,21,0	0/0:23,0:25:54.82:0,55,529	1/1:4,17:21:47.81:371,48,0	1/1:8,25:34:48.51:536,49,0	1/1:4,20:24:59.72:459,60,0	1/1:5,11:16:32.36:240,32,0	1/1:2,16:18:29.88:232,30,0	0/1:5,5:11:6.50:62,0,7	1/1:4,17:21:35.86:279,36,0	1/1:4,15:20:23.04:307,23,0	0/0:18,1:19:2.89:0,3,345	0/1:5,0:6:7.13:7,0,63	0/1:12,1:14:6.28:6,0,280	0/0:29,0:30:69.31:0,69,646	0/0:8,0:11:11.86:0,12,106	1/1:0,9:9:23.90:185,24,0	1/1:4,20:24:59.75:464,60,0	1/1:1,7:8:17.93:139,18,0	1/1:2,16:18:38.82:302,39,0	1/1:2,19:21:56.78:441,57,0	1/1:5,22:29:55.94:427,56,0	1/1:1,9:10:26.89:209,27,0
chr10	24660062	.	A	AC	207.37	PASS	AC=18;AF=0.474;AN=38;BaseQRankSum=5.519;DP=119;FS=33.874;HRun=0;HaplotypeScore=28.4655;InbreedingCoeff=0.4630;MQ=183.74;MQ0=2;MQRankSum=-3.642;QD=10.91;ReadPosRankSum=-3.795;VQSLOD=1.3458;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:63.18:0,63,846	./.	0/0:31,0:31:90.29:0,90,1240	0/0:30,0:30:83.91:0,84,1116	1/1:0,1:1:3:26,3,0	1/1:1,0:1:2.94:18,3,0	0/0:2,0:2:0:0,0,0	0/0:1,0:1:0:0,0,0	./.	1/1:3,1:4:2.98:28,3,0	1/1:0,2:2:6:51,6,0	1/1:1,0:1:2.92:17,3,0	0/0:1,0:1:0:0,0,0	1/1:0,1:1:3.01:36,3,0	./.	./.	./.	./.	./.	1/1:1,1:2:5.97:55,6,0	./.	0/0:2,0:2:0:0,0,0	./.	0/0:1,1:2:0:0,0,0	0/0:4,0:4:0:0,0,0	1/1:2,1:3:2.99:23,3,0	1/1:1,2:3:6.01:63,6,0	0/0:2,0:2:0:0,0,0
chr10	24660064	.	A	AT	9218.73	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=12.057;DP=386;FS=0.472;HRun=1;HaplotypeScore=256.8335;InbreedingCoeff=0.8969;MQ=103.61;MQ0=2;MQRankSum=-12.948;QD=30.23;ReadPosRankSum=2.721;VQSLOD=4.2214;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:63.18:0,63,801	1/1:2,0:2:4.24:28,4,0	0/0:30,0:30:90.29:0,90,1154	0/0:29,0:29:78.25:0,78,1009	1/1:8,1:9:16.56:191,17,0	1/1:18,0:18:47.97:537,48,0	1/1:11,0:11:33.06:426,33,0	1/1:23,0:23:60.58:740,61,0	1/1:19,0:18:50.36:618,50,0	1/1:17,1:18:51.07:564,51,0	1/1:6,2:8:24.05:298,24,0	1/1:11,0:10:26.89:252,27,0	1/1:16,0:16:44.68:555,45,0	1/1:12,1:13:35.86:389,36,0	1/1:18,0:18:47.90:485,48,0	1/1:16,0:16:41.84:435,42,0	1/1:6,0:6:14.88:179,15,0	1/1:2,0:2:5.99:48,6,0	1/1:10,0:10:27.05:287,27,0	1/1:15,1:16:41.90:495,42,0	1/1:9,1:9:21.03:259,21,0	1/1:8,0:8:21:243,21,0	1/1:6,0:6:17.93:173,18,0	1/1:6,1:6:14.96:152,15,0	1/1:19,0:19:52.38:687,52,0	1/1:13,1:14:39.05:438,39,0	1/1:11,2:13:30.56:380,31,0	1/1:12,0:12:35.96:361,36,0
chr10	24661341	.	C	CTAT	23326.68	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-4.352;DP=452;FS=12.338;HRun=0;HaplotypeScore=62.9666;InbreedingCoeff=0.9239;MQ=67.57;MQ0=0;MQRankSum=-4.332;QD=53.62;ReadPosRankSum=2.748;VQSLOD=6.0546;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,12:13:30.10:652,30,0	1/1:2,8:10:24.08:529,24,0	0/0:8,0:8:17.91:0,18,224	0/0:9,0:8:13.98:0,14,165	1/1:3,28:33:75.26:1650,75,0	1/1:1,16:18:45.15:992,45,0	1/1:0,10:10:27.09:596,27,0	1/1:10,19:31:78.24:1622,78,0	1/1:0,10:10:27.09:596,27,0	1/1:4,10:15:33.10:687,33,0	1/1:2,18:20:54.18:1159,54,0	1/1:2,17:21:45.15:992,45,0	1/1:2,10:12:27.09:566,27,0	1/1:7,15:23:48.16:1057,48,0	1/1:4,13:17:36.12:794,36,0	1/1:1,11:12:33.11:728,33,0	1/1:1,11:12:30.10:661,30,0	1/1:2,8:10:24.08:529,24,0	1/1:5,16:21:60.16:1244,60,0	1/1:1,25:28:75.26:1640,75,0	1/1:2,5:7:15.05:331,15,0	1/1:1,3:4:9.03:198,9,0	1/1:3,7:10:18.06:397,18,0	1/1:0,4:4:12.04:264,12,0	1/1:3,23:26:69.24:1522,69,0	1/1:3,18:20:54.19:1156,54,0	1/1:5,32:38:99:2300,105,0	1/1:2,7:9:21.07:463,21,0
chr10	24661636	.	GT	G	14537.80	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-1.664;DP=667;FS=2.184;HRun=8;HaplotypeScore=126.7912;InbreedingCoeff=0.9874;MQ=81.07;MQ0=1;MQRankSum=-7.375;QD=23.79;ReadPosRankSum=7.907;VQSLOD=2.9923;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:1,25:26:66.11:637,66,0	1/1:0,7:7:21.03:203,21,0	0/0:35,2:34:46.39:0,46,718	0/0:19,0:19:23.45:0,23,282	1/1:9,24:33:66.09:637,66,0	1/1:2,21:23:63.10:608,63,0	1/1:2,13:15:36.06:348,36,0	1/1:4,38:42:99:1047,111,0	1/1:1,16:17:45.07:434,45,0	1/1:4,23:27:69.10:666,69,0	1/1:3,20:23:51.08:492,51,0	1/1:3,16:19:45.07:434,45,0	1/1:2,27:29:81.13:780,81,0	1/1:1,23:24:63.10:608,63,0	1/1:3,27:30:78.12:753,78,0	1/1:0,31:31:84.14:811,84,0	1/1:1,17:18:51.08:492,51,0	1/1:1,6:7:15.02:145,15,0	1/1:3,17:20:48.07:463,48,0	1/1:2,29:31:78.01:734,78,0	1/1:2,15:17:39.06:377,39,0	1/1:3,17:20:48.08:463,48,0	1/1:2,16:18:42.07:406,42,0	1/1:0,28:28:72.12:695,72,0	1/1:1,22:23:51:492,51,0	1/1:6,30:36:90.14:869,90,0	1/1:5,28:33:75.11:723,75,0	1/1:0,14:14:23.99:222,24,0
chr10	24661951	.	CA	C	5458.13	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-4.021;DP=708;FS=7.256;HRun=2;HaplotypeScore=92.8497;InbreedingCoeff=0.9986;MQ=83.24;MQ0=0;MQRankSum=-2.846;QD=36.88;ReadPosRankSum=0.685;VQSLOD=4.9894;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:84.25:0,84,1230	0/0:8,0:8:24.08:0,24,358	0/0:31,0:31:87.28:0,87,1271	0/0:31,0:31:87.25:0,87,1240	0/0:28,0:28:84.26:0,84,1233	0/0:36,0:36:99:0,108,1578	0/0:22,0:22:66.22:0,66,989	1/1:0,32:32:96.27:1204,96,0	0/0:17,0:17:51.17:0,51,764	0/0:31,0:31:90.30:0,90,1350	0/0:25,0:24:75.23:0,75,1087	0/0:23,0:23:69.23:0,69,1023	0/0:34,0:34:99:0,102,1505	0/0:28,0:28:84.28:0,84,1250	0/0:34,0:34:99:0,102,1529	0/0:21,0:21:63.20:0,63,926	1/1:0,22:22:63.20:818,63,0	1/1:1,11:12:30.10:389,30,0	1/1:0,26:26:78.22:982,78,0	1/1:0,37:37:99:1441,111,0	1/1:1,18:19:48.16:623,48,0	0/0:34,0:34:99:0,99,1484	0/0:25,0:25:75.25:0,75,1124	0/0:14,0:14:42.14:0,42,630	0/0:14,0:14:42.14:0,42,630	0/0:35,0:35:99:0,102,1529	0/0:34,0:34:99:0,102,1489	0/0:7,0:7:21.07:0,21,315
chr10	24662527	.	C	CATATATATATATATATATATATATAT	3726.14	PASS	AB=1.000;AC=25;AF=0.893;AN=28;BaseQRankSum=-1.101;DP=102;FS=2.191;HRun=0;HaplotypeScore=66.1730;InbreedingCoeff=0.1388;MQ=74.25;MQ0=0;MQRankSum=-1.443;QD=48.39;ReadPosRankSum=1.101;VQSLOD=2.0965;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	1/1:2,0:2:6.01:99,6,0	0/0:3,0:3:4.26:0,4,137	0/1:11,0:5:21.11:27,0,21	./.	1/1:3,0:3:0.47:1,0,0	./.	1/1:22,0:22:42.12:1377,42,0	1/1:5,0:5:2.99:24,3,0	1/1:2,0:2:3.01:59,3,0	./.	./.	./.	1/1:2,0:2:2.99:24,3,0	./.	./.	1/1:6,0:6:15.03:848,15,0	1/1:3,0:3:6.02:495,6,0	./.	1/1:3,0:3:3.01:50,3,0	./.	./.	./.	./.	1/1:4,0:4:3.01:45,3,0	./.	1/1:3,0:3:2.99:24,3,0	1/1:4,1:11:6.02:654,6,0
chr10	24663393	.	A	ACT	5054.82	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-11.844;DP=508;FS=26.642;HRun=0;HaplotypeScore=109.7827;InbreedingCoeff=0.9814;MQ=96.72;MQ0=0;MQRankSum=-0.358;QD=44.34;ReadPosRankSum=0.003;VQSLOD=3.5259;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,17:21:38.74:834,39,0	0/0:10,0:10:27.09:0,27,397	0/0:30,0:30:78.24:0,78,1110	0/0:20,0:20:51.12:0,51,719	0/0:18,0:18:38.56:0,39,573	0/0:21,0:21:57.18:0,57,819	0/0:26,0:26:75.24:0,75,1084	1/1:7,19:26:60.15:1055,60,0	0/0:19,0:19:57.18:0,57,818	0/0:13,0:13:30.10:0,30,440	0/0:13,0:13:29.65:0,30,440	0/0:17,0:17:45.15:0,45,662	0/0:31,0:31:84.27:0,84,1215	0/0:28,0:28:81.27:0,81,1193	0/0:18,0:18:51.14:0,51,727	0/0:20,0:20:60.20:0,60,884	1/1:0,26:27:72.25:1348,72,0	1/1:0,3:3:9.03:168,9,0	1/1:3,10:13:33.07:582,33,0	1/1:1,14:15:42.14:787,42,0	1/1:2,7:9:15.05:281,15,0	0/0:7,0:7:18.03:0,18,227	0/0:7,0:7:14.96:0,15,221	0/0:16,0:16:45.14:0,45,640	0/0:24,0:24:72.24:0,72,1058	0/0:14,0:14:36.12:0,36,528	0/0:33,0:33:99:0,99,1426	0/0:9,0:9:27.09:0,27,391
chr10	24663649	.	G	GT	3985.14	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-10.663;DP=477;FS=7.542;HRun=5;HaplotypeScore=45.2336;InbreedingCoeff=0.9918;MQ=79.38;MQ0=0;MQRankSum=-2.019;QD=32.94;ReadPosRankSum=-2.479;VQSLOD=2.9281;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:57.14:0,57,612	0/0:10,0:10:30.08:0,30,322	0/0:12,0:12:30.07:0,30,321	0/0:13,0:13:14.53:0,15,323	0/0:22,0:22:57.14:0,57,613	0/0:21,0:20:63.16:0,63,677	0/0:12,0:12:33.08:0,33,355	1/1:5,27:32:81.25:1049,81,0	0/0:10,0:10:24.06:0,24,258	0/0:18,0:18:45.11:0,45,484	0/0:19,0:19:51.13:0,51,548	0/0:15,0:15:45.11:0,45,484	0/0:28,0:28:84.21:0,84,903	0/0:19,0:19:57.14:0,57,613	0/0:13,0:13:39.08:0,39,411	0/0:13,0:13:30.07:0,30,322	1/1:4,16:20:47.53:611,48,0	1/1:2,13:15:39.13:513,39,0	1/1:6,9:15:27.09:351,27,0	1/1:0,27:27:78.18:988,78,0	1/1:0,12:12:36.12:473,36,0	0/0:6,0:6:15.04:0,15,161	0/0:12,0:12:33.97:0,34,357	0/0:11,0:11:30.08:0,30,322	0/0:29,0:29:81.20:0,81,871	0/0:18,0:18:54.14:0,54,581	0/0:22,0:22:60.15:0,60,645	0/0:12,0:12:27.07:0,27,290
chr10	24665884	.	T	TACACAC	4751.89	PASS	AB=0.823;AC=48;AF=0.923;AN=52;BaseQRankSum=-2.189;DP=442;FS=1.456;HRun=0;HaplotypeScore=113.6302;InbreedingCoeff=0.1255;MQ=58.60;MQ0=14;MQRankSum=-2.549;QD=12.64;ReadPosRankSum=-1.365;VQSLOD=3.3639;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:14,0:14:2.69:3,0,36	1/1:1,0:5:3.70:41,4,0	./.	./.	1/1:15,0:15:2.99:24,3,0	1/1:10,15:26:17.90:574,18,0	1/1:13,2:15:21.07:466,21,0	1/1:32,0:31:25.20:234,25,0	1/1:9,0:9:8.98:77,9,0	1/1:3,0:7:6:82,6,0	0/1:9,0:20:45.81:138,0,46	1/1:7,3:10:6.02:136,6,0	1/1:3,5:8:6.02:193,6,0	1/1:3,0:10:6.02:77,6,0	1/1:6,0:13:3.01:38,3,0	1/1:7,0:14:15.05:248,15,0	0/0:15,0:25:0.65:0,1,242	1/1:12,0:12:11.06:147,11,0	1/1:7,0:11:20.21:265,20,0	1/1:6,13:21:15.05:480,15,0	1/1:20,0:17:12.01:162,12,0	1/1:5,5:12:3.01:97,3,0	1/1:3,2:7:6.02:194,6,0	1/1:22,0:20:15.03:202,15,0	1/1:12,0:15:24.07:357,24,0	1/1:9,0:19:26.99:338,27,0	1/1:17,0:26:0.99:105,1,0	1/1:3,0:9:6.02:77,6,0
chr10	24665920	.	CACAT	C	895.09	PASS	AB=1.000;AC=8;AF=0.143;AN=56;BaseQRankSum=-3.868;DP=443;FS=6.134;HRun=0;HaplotypeScore=97.3050;InbreedingCoeff=0.0482;MQ=58.04;MQ0=12;MQRankSum=-0.275;QD=6.83;ReadPosRankSum=-0.781;VQSLOD=1.7342;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:0,6:6:6.02:125,6,0	0/0:7,0:6:14.06:0,14,229	0/0:22,0:13:26.01:0,26,266	0/0:22,0:6:8.17:0,8,117	0/0:18,0:18:32.20:0,32,279	0/0:31,0:31:59.91:0,60,701	0/0:18,0:18:40.50:0,41,476	0/1:31,0:29:99:263,0,239	0/0:11,0:11:26.96:0,27,341	0/0:10,0:10:24.06:0,24,308	0/0:23,0:23:51.75:0,52,580	0/0:10,0:10:23.96:0,24,263	0/0:12,0:12:27:0,27,324	0/0:8,0:8:9.03:0,9,172	0/0:11,0:11:15.03:0,15,219	0/0:12,0:12:27.05:0,27,424	0/1:29,0:29:99:183,0,342	0/1:12,0:12:28.03:129,0,28	0/1:16,0:14:76.23:179,0,76	0/1:19,0:19:93.62:101,0,94	0/1:18,0:14:49.03:49,0,94	0/0:8,0:8:6.01:0,6,90	0/0:6,0:6:11.76:0,12,150	0/0:20,0:18:27:0,27,428	0/0:13,0:12:36.08:0,36,614	0/0:16,0:16:47.12:0,47,654	0/0:18,0:18:32.77:0,33,459	0/0:16,0:16:32.94:0,33,346
chr10	24666514	.	TA	T	2317.71	PASS	AB=0.919;AC=16;AF=0.286;AN=56;BaseQRankSum=10.975;DP=563;FS=1.814;HRun=10;HaplotypeScore=58.1394;InbreedingCoeff=0.7916;MQ=74.57;MQ0=0;MQRankSum=-0.958;QD=15.77;ReadPosRankSum=-2.092;VQSLOD=3.4490;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,8:9:21:182,21,0	0/0:11,0:11:24.06:0,24,265	0/1:12,1:13:8.56:9,0,163	0/1:9,1:10:19.74:20,0,71	0/0:40,0:40:99:0,108,1184	0/0:22,0:22:63.17:0,63,697	0/0:18,0:18:51.14:0,51,564	1/1:8,28:35:83.86:711,84,0	0/0:18,0:18:48.12:0,48,523	0/0:27,0:27:72.19:0,72,796	0/0:22,0:22:57.13:0,57,620	0/0:19,1:20:34.11:0,34,605	0/0:28,0:28:72.19:0,72,796	0/0:17,0:17:51.05:0,51,526	0/0:30,0:30:66.18:0,66,730	0/0:20,0:19:54.14:0,54,590	1/1:3,11:14:26.99:234,27,0	1/1:2,8:10:23.98:208,24,0	1/1:5,10:16:32.02:266,32,0	1/1:3,27:30:77.98:677,78,0	1/1:1,8:9:23.99:208,24,0	0/0:18,0:18:48.13:0,48,531	0/0:16,1:17:16.06:0,16,405	0/0:5,0:5:12.03:0,12,133	0/0:23,1:23:39.94:0,40,644	0/0:29,0:29:72.17:0,72,781	0/0:39,0:39:76.26:0,76,1069	0/0:9,1:10:1.02:0,1,239
chr10	24666886	.	TA	T	1444.98	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.520;DP=571;FS=7.486;HRun=1;HaplotypeScore=65.6149;InbreedingCoeff=0.9919;MQ=88.33;MQ0=0;MQRankSum=-1.979;QD=38.03;ReadPosRankSum=-4.051;VQSLOD=2.0574;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:48.16:0,48,766	0/0:9,0:9:27.08:0,27,408	0/0:28,0:27:73.79:0,74,1100	0/0:16,0:16:45.06:0,45,662	0/0:31,0:31:90.29:0,90,1414	0/0:18,0:18:54.18:0,54,863	0/0:20,0:20:60.15:0,60,883	1/1:0,38:38:99:1540,114,0	0/0:9,0:9:27.08:0,27,398	0/0:25,0:25:75.23:0,75,1137	0/0:21,0:21:63.19:0,63,959	0/0:22,0:22:66.18:0,66,982	0/0:25,0:25:75.24:0,75,1172	0/0:24,0:24:72.16:0,72,1097	0/0:28,0:28:84.27:0,84,1319	0/0:26,0:26:78.27:0,78,1246	0/0:17,0:17:47.72:0,48,701	0/0:7,0:7:21.07:0,21,332	0/0:24,0:24:72.22:0,72,1078	0/0:22,0:22:66.16:0,66,981	0/0:16,0:16:48.14:0,48,721	0/0:17,0:17:51.17:0,51,808	0/0:16,0:16:48.16:0,48,765	0/0:17,0:17:51.16:0,51,790	0/0:22,0:22:66.23:0,66,1053	0/0:16,0:16:48.16:0,48,766	0/0:32,0:32:96.28:0,96,1452	0/0:9,0:9:24.08:0,24,383
chr10	24667694	.	C	CTGTTTGTT	707.91	PASS	AB=0.677;AC=1;AF=0.018;AN=56;BaseQRankSum=0.783;DP=599;FS=8.520;HRun=0;HaplotypeScore=148.1078;InbreedingCoeff=0.0941;MQ=69.02;MQ0=0;MQRankSum=-4.786;QD=33.71;ReadPosRankSum=-1.583;VQSLOD=2.7319;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:11,7:21:10.28:782,0,10	0/0:12,0:12:27.09:0,27,619	0/0:18,0:17:20.83:0,21,343	0/0:21,0:20:24.08:0,24,476	0/0:30,0:30:78.24:0,78,1801	0/0:35,0:35:75.22:0,75,1746	0/0:14,0:14:30.09:0,30,695	0/0:31,0:31:39.09:0,39,649	0/0:14,0:14:30.09:0,30,658	0/0:18,0:18:30.10:0,30,733	0/0:23,0:23:30.07:0,30,644	0/0:22,0:22:40.19:0,40,1230	0/0:30,0:30:57.15:0,57,1302	0/0:22,0:22:51.15:0,51,1184	0/0:36,0:36:75.25:0,75,1779	0/0:30,0:30:72.25:0,72,1842	0/0:28,0:27:3.19:0,3,1368	0/0:19,0:19:33.06:0,33,679	0/0:24,0:23:30.09:0,30,634	0/0:16,0:16:42.13:0,42,932	0/0:18,0:18:48.15:0,48,1086	0/0:11,0:11:21.07:0,21,494	0/0:12,0:12:21.06:0,21,485	0/0:19,0:19:45.14:0,45,1088	0/0:13,0:13:30.10:0,30,691	0/0:23,0:23:39.12:0,39,813	0/0:29,0:29:63.18:0,63,1435	0/0:10,0:10:19.62:0,20,465
chr10	24668034	.	TTA	T	228.08	PASS	AC=2;AF=0.040;AN=50;BaseQRankSum=3.883;DP=207;FS=1.347;HRun=0;HaplotypeScore=34.3177;InbreedingCoeff=0.4331;MQ=89.01;MQ0=3;MQRankSum=-1.947;QD=22.81;ReadPosRankSum=-0.034;VQSLOD=3.6236;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,10:10:24.08:320,24,0	./.	0/0:11,0:5:5.90:0,6,52	0/0:26,0:17:17.21:0,17,150	0/0:10,0:10:24.08:0,24,416	0/0:15,0:15:39.13:0,39,667	0/0:1,0:1:3.01:0,3,46	0/0:34,0:34:75.26:0,75,1292	0/0:4,0:4:12.04:0,12,208	0/0:3,0:3:9.03:0,9,156	0/0:2,0:2:3.01:0,3,37	0/0:3,0:3:6.02:0,6,104	0/0:7,0:7:18.06:0,18,309	0/0:1,0:1:3.01:0,3,48	0/0:6,0:6:15.05:0,15,254	0/0:9,0:9:27.09:0,27,449	0/0:12,0:12:36.12:0,36,623	0/0:7,0:7:18.06:0,18,311	0/0:6,0:6:18.06:0,18,297	0/0:3,0:3:9.03:0,9,152	0/0:2,0:2:5.98:0,6,72	./.	0/0:3,0:3:9.03:0,9,153	./.	0/0:8,0:8:18.06:0,18,295	0/0:9,0:9:24.07:0,24,390	0/0:10,0:10:24.08:0,24,411	0/0:5,0:5:15.05:0,15,248
chr10	24668420	.	TATA	T	108.14	PASS	AB=0.767;AC=2;AF=0.036;AN=56;BaseQRankSum=4.838;DP=611;FS=7.878;HRun=0;HaplotypeScore=88.7787;InbreedingCoeff=-0.0367;MQ=79.73;MQ0=0;MQRankSum=4.708;QD=3.73;ReadPosRankSum=-3.029;VQSLOD=0.1283;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:17:54.19:0,54,1248	0/0:9,0:9:27.09:0,27,638	0/1:8,6:14:99:179,0,259	0/1:12,2:15:15.68:16,0,453	0/0:29,0:29:87.27:0,87,1948	0/0:35,0:35:99:0,102,2360	0/0:26,0:26:75.26:0,75,1726	0/0:28,0:28:81.27:0,81,1858	0/0:25,0:25:75.26:0,75,1772	0/0:26,0:26:78.27:0,78,1817	0/0:23,0:23:69.24:0,69,1630	0/0:27,0:27:78.27:0,78,1843	0/0:28,0:28:84.25:0,84,1829	0/0:24,0:24:72.23:0,72,1611	0/0:23,0:23:69.24:0,69,1591	0/0:23,0:23:66.23:0,66,1561	0/0:20,0:20:60.21:0,60,1409	0/0:8,0:8:21.07:0,21,496	0/0:25,0:25:69.24:0,69,1599	0/0:26,0:26:78.27:0,78,1838	0/0:15,0:15:45.15:0,45,1063	0/0:14,0:14:42.13:0,42,947	0/0:22,0:22:66.23:0,66,1560	0/0:15,0:15:45.15:0,45,987	0/0:24,0:23:69.24:0,69,1631	0/0:32,0:32:96.33:0,96,2221	0/0:21,0:21:63.22:0,63,1489	0/0:16,0:16:42.62:0,43,993
chr10	24669933	.	TTA	T	4673.50	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=13.308;DP=623;FS=2.802;HRun=0;HaplotypeScore=70.4567;InbreedingCoeff=0.9681;MQ=68.53;MQ0=0;MQRankSum=0.474;QD=39.94;ReadPosRankSum=-0.367;VQSLOD=6.4327;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:69.21:0,69,1165	0/0:13,0:13:39.09:0,39,640	0/0:8,0:8:12.05:0,12,304	0/0:4,0:4:6.46:0,6,75	0/0:41,0:41:99:0,120,1905	0/0:25,0:25:75.24:0,75,1294	0/0:14,0:14:42.11:0,42,671	1/1:0,31:31:93.25:1304,93,0	0/0:23,0:23:66.19:0,66,1081	0/0:38,0:38:99:0,108,1859	0/0:36,0:36:99:0,105,1857	0/0:20,0:20:57.20:0,57,1015	0/0:30,0:30:85.14:0,85,1411	0/0:24,0:24:69.14:0,69,1049	0/0:29,0:29:87.12:0,87,1409	0/0:24,0:24:72.22:0,72,1212	1/1:0,19:19:45.15:688,45,0	1/1:0,7:7:15.05:229,15,0	1/1:0,20:20:60.14:851,60,0	1/1:1,25:26:75.19:1096,75,0	1/1:0,14:14:33.11:505,33,0	0/0:19,0:19:57.17:0,57,945	0/0:33,0:33:99:0,99,1731	0/0:12,0:12:36.11:0,36,617	0/0:28,0:28:84.26:0,84,1450	0/0:27,0:27:81.23:0,81,1368	0/0:29,0:29:87.27:0,87,1494	0/0:5,0:5:14.98:0,15,205
chr10	24670886	.	GA	G	10911.28	PASS	AB=0.966;AC=44;AF=0.786;AN=56;BaseQRankSum=7.893;DP=641;FS=9.027;HRun=10;HaplotypeScore=63.5274;InbreedingCoeff=0.7758;MQ=68.73;MQ0=1;MQRankSum=-0.087;QD=20.32;ReadPosRankSum=4.715;VQSLOD=5.4423;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,20:24:26.81:462,27,0	1/1:0,5:5:15:130,15,0	0/1:25,2:22:11.48:11,0,321	0/1:9,0:9:12.48:12,0,83	1/1:3,41:44:99:1016,117,0	1/1:6,42:48:95.75:1054,96,0	1/1:1,18:19:50.99:443,51,0	1/1:5,26:31:74.97:651,75,0	1/1:3,27:30:74.98:651,75,0	1/1:6,23:29:68.96:595,69,0	1/1:5,17:22:44.97:391,45,0	1/1:3,22:25:40.93:522,41,0	1/1:4,33:37:92.98:807,93,0	1/1:2,14:16:41.99:365,42,0	1/1:3,26:29:74.98:651,75,0	1/1:1,24:25:68.98:599,69,0	0/0:28,0:28:63.17:0,63,696	0/0:15,0:15:33.01:0,33,330	0/0:20,0:20:54.15:0,54,597	0/0:28,0:28:75.19:0,75,821	0/0:12,1:13:7.03:0,7,305	1/1:2,15:17:44.99:391,45,0	1/1:1,16:17:47.99:417,48,0	1/1:0,5:5:15:130,15,0	1/1:1,20:21:53.99:469,54,0	1/1:3,16:19:50.99:442,51,0	1/1:4,22:26:59.97:521,60,0	1/1:0,12:12:21:182,21,0
chr10	24671650	.	TATATATATATATATATAC	T	2262.18	PASS	AB=1.000;AC=26;AF=0.619;AN=42;BaseQRankSum=3.907;DP=220;FS=7.112;HRun=0;HaplotypeScore=95.5772;InbreedingCoeff=0.1151;MQ=59.23;MQ0=17;MQRankSum=0.451;QD=17.01;ReadPosRankSum=1.451;VQSLOD=0.9660;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	1/1:3,0:3:3.01:96,3,0	0/0:30,0:9:6.28:0,6,52	0/0:46,0:8:2.94:0,3,24	0/1:7,0:7:0:0,0,0	1/1:4,7:11:9.03:450,9,0	./.	0/1:17,0:16:99:116,0,610	1/1:4,0:4:3.01:99,3,0	0/1:10,0:10:16.69:161,0,17	./.	0/1:3,0:3:1.20:38,0,1	1/1:9,0:9:6.02:193,6,0	0/0:4,0:4:6.02:0,6,75	1/1:9,0:9:6.02:194,6,0	1/1:4,0:4:2.98:22,3,0	0/1:13,0:13:60.15:88,0,60	0/1:8,0:8:3.94:4,0,204	0/1:5,0:5:22.27:30,0,22	0/0:1,0:1:3.01:0,3,54	0/1:1,0:1:0:0,0,0	./.	./.	./.	1/1:5,0:5:3.01:60,3,0	1/1:14,0:14:29.94:452,30,0	1/1:10,0:10:12.04:385,12,0	./.
chr10	24671652	.	TATATATATATATATAC	T	2979.60	PASS	AB=0.931;AC=28;AF=0.667;AN=42;BaseQRankSum=3.589;DP=214;FS=2.473;HRun=0;HaplotypeScore=85.6245;InbreedingCoeff=0.2424;MQ=62.11;MQ0=17;MQRankSum=0.748;QD=22.40;ReadPosRankSum=1.641;VQSLOD=2.0420;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	1/1:0,3:3:3.01:136,3,0	0/0:25,0:7:5.52:0,6,40	0/0:47,0:9:2.52:0,3,23	0/1:2,5:7:0:0,0,0	1/1:10,0:10:9.03:349,9,0	./.	0/1:16,0:15:99:117,0,465	1/1:1,3:4:3.01:136,3,0	1/1:2,8:10:14.97:250,15,0	./.	1/1:3,0:3:8.96:69,9,0	1/1:1,8:9:6.02:272,6,0	0/0:3,0:3:5.59:0,6,35	1/1:3,6:9:6.02:272,6,0	1/1:5,0:5:5.97:44,6,0	0/1:13,0:13:19.85:167,0,20	0/1:8,0:8:7.73:8,0,104	0/1:7,0:6:2.45:94,0,2	0/0:1,0:1:3.01:0,3,31	0/1:1,0:1:0:0,0,0	./.	./.	./.	1/1:5,0:5:3.01:83,3,0	1/1:2,11:13:29.94:566,30,0	1/1:1,9:10:12.04:544,12,0	./.
chr10	24671656	.	TATATATATATAC	T	2839.21	PASS	AB=1.000;AC=37;AF=0.841;AN=44;BaseQRankSum=1.529;DP=208;FS=0.000;HRun=0;HaplotypeScore=82.2731;InbreedingCoeff=0.2717;MQ=63.98;MQ0=17;MQRankSum=1.053;QD=19.18;ReadPosRankSum=0.622;VQSLOD=1.9231;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:6,0:6:5.99:48,6,0	1/1:3,0:3:3.01:89,3,0	0/0:22,0:5:6.22:0,6,43	0/0:38,0:8:1.53:0,2,20	0/1:7,0:7:0:0,0,0	1/1:10,0:10:9.03:266,9,0	./.	0/1:21,0:20:99:258,0,235	1/1:4,0:4:3.01:89,3,0	1/1:10,0:10:13.21:158,13,0	./.	1/1:4,0:4:11.95:91,12,0	1/1:9,0:9:6.02:178,6,0	1/1:3,0:3:2.98:22,3,0	1/1:9,0:9:6.02:178,6,0	1/1:5,0:5:5.97:44,6,0	1/1:10,2:12:12.04:370,12,0	1/1:9,0:9:4.85:96,5,0	1/1:2,4:5:8.95:169,9,0	1/1:1,0:1:2.98:22,3,0	0/1:1,0:1:0:0,0,0	./.	./.	./.	1/1:5,0:5:3.01:89,3,0	1/1:13,0:13:29.94:425,30,0	1/1:10,0:10:12.04:355,12,0	./.
chr10	24671666	.	TAC	T	1621.79	PASS	AB=1.000;AC=42;AF=0.875;AN=48;BaseQRankSum=-0.500;DP=173;FS=1.577;HRun=0;HaplotypeScore=52.5351;InbreedingCoeff=0.3218;MQ=75.60;MQ0=9;MQRankSum=0.383;QD=12.01;ReadPosRankSum=1.540;VQSLOD=3.0965;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,0:3:5.99:48,6,0	1/1:3,0:3:2.96:19,3,0	0/0:15,0:5:4.12:0,4,34	0/0:23,0:8:1.18:0,1,20	0/1:6,0:6:0:0,0,0	1/1:7,0:7:8.87:56,9,0	1/1:1,0:1:2.98:22,3,0	1/1:3,25:27:55.38:534,55,0	1/1:3,0:3:2.96:19,3,0	1/1:8,0:8:11.89:85,12,0	./.	1/1:6,0:6:17.93:137,18,0	1/1:8,0:8:5.91:38,6,0	1/1:1,0:1:2.98:22,3,0	1/1:6,0:6:5.91:38,6,0	1/1:4,0:4:5.97:44,6,0	1/1:9,0:10:5.19:51,5,0	1/1:6,0:7:14.37:121,14,0	1/1:5,0:4:11.90:85,12,0	1/1:3,0:3:5.97:45,6,0	0/1:1,0:1:0:0,0,0	./.	1/1:1,0:1:2.99:23,3,0	./.	1/1:4,0:4:5.94:42,6,0	1/1:11,0:11:29.78:216,30,0	1/1:9,0:9:11.82:76,12,0	./.
chr10	24671668	.	C	CAT	2643.42	PASS	AB=1.000;AC=42;AF=0.875;AN=48;BaseQRankSum=-2.104;DP=178;FS=0.000;HRun=0;HaplotypeScore=47.7241;InbreedingCoeff=0.3917;MQ=75.43;MQ0=8;MQRankSum=-0.738;QD=18.62;ReadPosRankSum=1.070;VQSLOD=3.3855;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,0:5:5.99:48,6,0	1/1:3,0:3:2.04:6,2,0	0/0:14,0:4:8.43:0,8,67	0/0:21,0:8:3.90:0,4,35	0/1:8,0:8:0:0,0,0	1/1:7,0:7:3.53:8,4,0	1/1:1,0:1:3.01:46,3,0	1/1:28,0:27:72.69:1061,73,0	1/1:3,0:3:2.22:7,2,0	1/1:8,0:8:11.83:155,12,0	./.	1/1:6,0:6:18.06:272,18,0	1/1:10,0:10:4.26:13,4,0	1/1:1,0:1:3.01:47,3,0	1/1:6,0:6:4.59:15,5,0	1/1:4,0:4:6.02:95,6,0	1/1:4,7:11:6.96:23,7,0	1/1:7,0:7:18.01:247,18,0	1/1:5,0:4:10.85:138,11,0	1/1:3,0:3:6.02:94,6,0	0/1:1,0:1:0:0,0,0	./.	1/1:1,0:1:3.01:47,3,0	./.	1/1:4,0:4:5.38:54,5,0	1/1:11,0:11:28.01:349,28,0	1/1:9,0:9:7.51:24,8,0	./.
chr10	24672507	.	GA	G	3682.14	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=10.098;DP=702;FS=1.312;HRun=2;HaplotypeScore=69.7112;InbreedingCoeff=0.9995;MQ=77.97;MQ0=0;MQRankSum=-1.296;QD=34.74;ReadPosRankSum=0.269;VQSLOD=3.8198;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:57.19:0,57,854	0/0:15,0:15:45.05:0,45,605	0/0:21,0:21:56.23:0,56,738	0/0:13,0:13:36.08:0,36,481	0/0:34,0:34:99:0,99,1459	0/0:29,0:29:87.28:0,87,1284	0/0:28,0:28:81.23:0,81,1149	0/0:35,0:35:99:0,99,1484	0/0:21,0:21:60.20:0,60,889	0/0:27,0:27:75.23:0,75,1093	0/0:22,0:22:63.20:0,63,925	0/0:27,0:27:81.27:0,81,1196	0/0:35,0:35:99:0,99,1458	0/0:33,0:33:96.32:0,96,1433	0/0:34,0:34:99:0,102,1504	0/0:33,0:33:99:0,99,1479	1/1:0,26:26:69.22:896,69,0	1/1:0,9:9:24.08:312,24,0	1/1:0,21:21:60.14:723,60,0	1/1:0,26:26:69.22:895,69,0	1/1:0,24:24:66.21:856,66,0	0/0:22,0:22:66.22:0,66,984	0/0:23,0:23:66.22:0,66,985	0/0:18,0:18:51.16:0,51,743	0/0:26,0:26:78.25:0,78,1150	0/0:34,0:34:96.27:0,96,1413	0/0:33,0:33:99:0,99,1464	0/0:13,0:13:39.08:0,39,558
chr10	24675373	.	CTCATTTAGGAAT	C	670.68	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.963;DP=700;FS=14.145;HRun=0;HaplotypeScore=253.7805;InbreedingCoeff=0.9468;MQ=76.91;MQ0=0;MQRankSum=5.385;QD=18.63;ReadPosRankSum=-4.988;VQSLOD=0.0914;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,111,5652	0/0:8,0:8:18.06:0,18,1051	0/0:18,0:17:15.05:0,15,513	0/0:20,0:20:27.08:0,27,1077	0/0:36,0:36:78.25:0,78,3967	0/0:24,0:24:66.19:0,66,3241	0/0:20,0:20:39.12:0,39,1765	1/1:11,25:36:74.82:766,75,0	0/0:23,0:23:63.22:0,63,3389	0/0:28,0:28:57.20:0,57,3054	0/0:15,0:15:42.12:0,42,2059	0/0:26,0:26:63.20:0,63,3160	0/0:33,0:33:87.27:0,87,4190	0/0:33,0:33:78.27:0,78,4192	0/0:41,0:41:84.28:0,84,4338	0/0:35,0:35:87.27:0,87,3711	0/0:20,0:20:39.12:0,39,1801	0/0:20,0:20:51.14:0,51,2462	0/0:22,0:22:51.16:0,51,2408	0/0:25,0:25:63.21:0,63,3478	0/0:34,0:34:78.25:0,78,4012	0/0:16,0:16:36.12:0,36,1793	0/0:21,0:21:51.11:0,51,2602	0/0:19,0:19:36.12:0,36,1873	0/0:24,0:24:48.16:0,48,2698	0/0:17,0:17:45.14:0,45,2009	0/0:32,0:32:69.24:0,69,3380	0/0:8,0:7:12:0,12,424
chr10	24676004	.	A	AT	8498.78	PASS	AB=0.561;AC=36;AF=0.643;AN=56;BaseQRankSum=-0.093;DP=577;FS=8.290;HRun=10;HaplotypeScore=64.2813;InbreedingCoeff=0.8615;MQ=75.96;MQ0=0;MQRankSum=-0.960;QD=21.68;ReadPosRankSum=3.513;VQSLOD=5.7204;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:56.90:0,57,465	0/1:3,7:10:3.59:169,0,4	0/0:14,0:14:12.27:0,12,161	0/0:10,0:10:16.46:0,16,120	1/1:4,19:23:29.49:519,29,0	1/1:5,23:28:57.14:608,57,0	1/1:5,13:18:11.45:327,11,0	0/0:35,0:36:79.86:0,80,634	1/1:0,20:20:45.06:467,45,0	1/1:2,10:12:6.27:240,6,0	1/1:0,10:10:27.07:288,27,0	1/1:6,21:28:26.48:483,26,0	1/1:4,30:34:72.18:767,72,0	1/1:4,18:22:51.06:529,51,0	1/1:6,26:32:66.17:704,66,0	1/1:3,18:21:45.01:464,45,0	0/0:31,0:31:86.90:0,87,714	0/0:15,0:16:46.99:0,47,375	0/0:20,0:20:53.86:0,54,435	0/0:18,1:20:20.97:0,21,365	0/0:17,0:17:32.95:0,33,271	1/1:0,9:9:18.05:192,18,0	0/1:1,7:8:3.59:171,0,4	1/1:5,17:23:44.95:462,45,0	1/1:2,17:19:39.10:416,39,0	1/1:4,27:31:78.20:831,78,0	1/1:10,23:36:43.99:639,44,0	1/1:0,8:8:21.05:224,21,0
chr10	24677902	.	G	GA	706.13	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=-6.038;DP=726;FS=0.780;HRun=7;HaplotypeScore=83.0347;InbreedingCoeff=0.6590;MQ=75.90;MQ0=4;MQRankSum=-3.090;QD=16.42;ReadPosRankSum=1.130;VQSLOD=3.6184;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,24:26:66.20:797,66,0	0/0:12,0:12:36.05:0,36,342	0/1:17,0:17:12.89:13,0,229	0/0:25,0:25:53.52:0,54,473	0/0:42,0:41:99:0,111,1066	0/0:24,0:24:60.08:0,60,572	0/0:16,0:16:42.05:0,42,399	0/0:38,0:38:99:0,99,956	0/0:30,0:30:78.12:0,78,753	0/0:30,0:30:77.49:0,77,752	0/0:23,0:23:66.10:0,66,637	0/0:33,0:32:87.14:0,87,839	0/0:37,0:37:93.12:0,93,887	0/0:29,0:29:66.09:0,66,637	0/0:28,0:28:72.11:0,72,695	0/0:31,0:31:81.11:0,81,776	0/0:21,0:21:57.06:0,57,543	0/0:15,0:15:39.06:0,39,375	0/0:20,0:20:57.08:0,57,546	0/0:40,0:40:99:0,108,1043	0/0:25,0:25:66.10:0,66,636	0/0:30,0:30:84.13:0,84,811	0/0:14,0:14:36.06:0,36,347	0/0:15,0:15:36.05:0,36,348	0/0:40,0:39:99:0,105,1007	0/0:25,0:25:69.11:0,69,666	0/0:30,0:28:63.05:0,63,593	0/0:9,0:9:27.04:0,27,260
chr10	24677983	.	CAT	C	22128.86	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=14.604;DP=719;FS=0.608;HRun=0;HaplotypeScore=88.0613;InbreedingCoeff=0.9971;MQ=87.54;MQ0=5;MQRankSum=-4.445;QD=44.61;ReadPosRankSum=5.003;VQSLOD=6.4177;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:96.31:0,96,1908	1/1:0,13:13:36.12:586,36,0	0/0:27,0:27:81.23:0,81,1529	0/0:22,0:22:66.23:0,66,1336	1/1:0,24:23:66.23:1074,66,0	1/1:0,22:22:63.22:1024,63,0	1/1:0,25:25:69.24:1123,69,0	0/0:34,0:34:99:0,102,1980	1/1:0,25:25:72.25:1172,72,0	1/1:0,34:34:99:1617,102,0	1/1:0,15:15:32.90:498,33,0	1/1:0,28:27:69.24:1122,69,0	1/1:0,33:33:96.33:1562,96,0	1/1:0,33:33:87.30:1417,87,0	1/1:0,37:37:99:1759,108,0	1/1:0,38:38:99:1760,108,0	0/0:24,0:24:69.24:0,69,1401	0/0:8,0:8:24.08:0,24,443	0/0:15,0:15:42.14:0,42,850	0/0:35,0:35:99:0,105,2031	0/0:24,0:24:72.25:0,72,1450	1/1:0,26:26:75.26:1211,75,0	1/1:0,17:17:42.14:683,42,0	1/1:0,24:24:69.24:1124,69,0	1/1:0,29:28:78.27:1270,78,0	1/1:0,29:29:78.23:1222,78,0	1/1:0,39:37:99:1659,102,0	1/1:0,5:5:15.05:244,15,0
chr10	24679077	.	GAATGA	G	21468.47	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=10.971;DP=672;FS=1.860;HRun=0;HaplotypeScore=147.4348;InbreedingCoeff=0.9914;MQ=77.57;MQ0=0;MQRankSum=-11.572;QD=46.17;ReadPosRankSum=6.123;VQSLOD=4.9274;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:81.28:0,81,2367	1/1:0,10:10:15.05:308,15,0	0/0:25,0:25:60.21:0,60,1736	0/0:15,0:15:42.14:0,42,1271	1/1:3,26:29:57.13:1152,57,0	1/1:2,31:33:63.22:1324,63,0	1/1:2,12:14:18.06:350,18,0	0/0:32,0:32:87.28:0,87,2467	1/1:2,21:23:54.19:1116,54,0	1/1:2,24:26:72.24:1461,72,0	1/1:1,15:16:39.13:830,39,0	1/1:0,25:25:57.20:1192,57,0	1/1:2,37:39:69.24:1460,69,0	1/1:0,23:23:57.13:1138,57,0	1/1:0,36:36:90.31:1879,90,0	1/1:0,26:26:66.23:1371,66,0	0/0:24,0:24:69.24:0,69,2049	0/0:14,0:14:39.13:0,39,1197	0/0:19,0:19:54.16:0,54,1518	0/0:28,0:28:81.28:0,81,2476	0/0:21,0:21:57.20:0,57,1781	1/1:1,19:20:51.17:1055,51,0	1/1:1,29:30:68.52:1437,69,0	1/1:0,22:22:36.06:721,36,0	1/1:0,26:26:63.22:1330,63,0	1/1:0,25:25:72.16:1392,72,0	1/1:2,36:38:81.25:1698,81,0	1/1:0,4:4:12.04:255,12,0
chr10	24680713	.	G	GTA	1594.58	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-9.406;DP=658;FS=10.331;HRun=0;HaplotypeScore=76.2946;InbreedingCoeff=0.9821;MQ=67.52;MQ0=0;MQRankSum=0.270;QD=37.08;ReadPosRankSum=-5.557;VQSLOD=3.6157;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:63.20:0,63,817	0/0:12,0:12:33.09:0,33,414	0/0:15,0:15:22.72:0,23,372	0/0:16,0:15:24.82:0,25,240	0/0:47,0:47:99:0,129,1613	0/0:30,0:30:81.13:0,81,931	0/0:12,0:12:27.09:0,27,351	1/1:5,38:43:99:1689,114,0	0/0:23,0:23:63.13:0,63,755	0/0:29,0:29:71.99:0,72,861	0/0:34,0:34:93.23:0,93,1144	0/0:26,0:26:66.21:0,66,857	0/0:27,0:27:81.23:0,81,1022	0/0:25,0:25:69.18:0,69,849	0/0:23,0:23:60.17:0,60,750	0/0:24,0:24:63.13:0,63,744	0/0:9,0:9:21.07:0,21,272	0/0:8,0:8:18:0,18,199	0/0:19,0:19:45.12:0,45,545	0/0:36,0:36:93.28:0,93,1178	0/0:18,0:18:36.10:0,36,452	0/0:21,0:21:53.96:0,54,674	0/0:21,0:21:57.16:0,57,712	0/0:21,0:21:60.18:0,60,764	0/0:32,0:32:87.25:0,87,1115	0/0:24,0:24:71.95:0,72,874	0/0:29,0:29:78.24:0,78,998	0/0:11,0:11:32.99:0,33,371
chr10	24681754	.	G	GGA	5202.25	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=10.790;DP=674;FS=1.378;HRun=0;HaplotypeScore=87.0619;InbreedingCoeff=0.9967;MQ=80.54;MQ0=0;MQRankSum=-3.408;QD=44.09;ReadPosRankSum=2.780;VQSLOD=6.5969;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,14:16:36.12:630,36,0	0/0:16,0:16:45.15:0,45,630	0/0:25,0:25:62.86:0,63,824	0/0:19,0:19:48.16:0,48,663	0/0:29,0:29:84.28:0,84,1174	0/0:35,0:35:96.31:0,96,1326	0/0:29,0:29:78.26:0,78,1092	0/0:39,0:39:99:0,99,1356	0/0:18,0:18:54.18:0,54,754	0/0:24,0:24:63.20:0,63,867	0/0:20,0:20:51.17:0,51,714	0/0:25,0:25:72.23:0,72,993	0/0:33,0:33:93.27:0,93,1280	0/0:33,0:33:96.30:0,96,1309	0/0:28,0:28:75.25:0,75,1048	0/0:40,0:39:99:0,108,1508	1/1:1,12:13:33.11:594,33,0	1/1:3,15:18:45.15:810,45,0	1/1:3,13:16:39.13:702,39,0	1/1:4,34:39:99:1764,99,0	1/1:2,14:16:39.13:702,39,0	0/0:19,0:19:57.19:0,57,798	0/0:21,0:21:47.75:0,48,672	0/0:20,0:20:51.14:0,51,694	0/0:22,0:22:63.21:0,63,882	0/0:18,0:18:54.18:0,54,756	0/0:38,0:38:99:0,108,1513	0/0:5,0:5:15.05:0,15,205
chr10	24683041	.	A	ATT	11334.33	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-12.756;DP=421;FS=0.416;HRun=8;HaplotypeScore=51.0333;InbreedingCoeff=0.9480;MQ=66.47;MQ0=2;MQRankSum=0.516;QD=38.68;ReadPosRankSum=2.842;VQSLOD=4.6605;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:54.14:0,54,602	1/1:0,13:13:36.12:572,36,0	0/0:6,0:6:12.03:0,12,131	0/0:5,0:5:6.01:0,6,65	1/1:1,17:18:51.17:810,51,0	1/1:2,17:20:42.14:667,42,0	1/1:3,10:14:32.60:485,33,0	0/0:34,0:34:81.18:0,81,903	1/1:0,8:8:24.08:381,24,0	1/1:2,14:18:47.62:678,48,0	1/1:2,16:20:53.64:723,54,0	1/1:1,10:11:30.10:470,30,0	1/1:1,19:21:54.18:839,54,0	1/1:1,10:12:30.10:468,30,0	1/1:3,9:12:27.09:429,27,0	1/1:5,14:20:44.64:675,45,0	0/0:14,0:14:36.09:0,36,401	0/0:9,0:9:24.06:0,24,267	0/0:15,0:15:36.07:0,36,394	0/0:25,0:25:75.20:0,75,836	0/0:1,0:1:3.01:0,3,33	1/1:1,10:11:30.06:448,30,0	1/1:2,10:13:29.59:437,30,0	1/1:0,7:7:18.06:286,18,0	1/1:2,21:23:63.20:979,63,0	1/1:2,11:14:33.11:524,33,0	1/1:3,20:25:62.69:942,63,0	1/1:2,11:11:33.11:523,33,0
chr10	24684535	.	CTTATTG	C	5981.56	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=0.498;DP=612;FS=3.740;HRun=0;HaplotypeScore=148.2765;InbreedingCoeff=0.9468;MQ=68.66;MQ0=3;MQRankSum=-11.535;QD=50.27;ReadPosRankSum=-0.329;VQSLOD=4.4901;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,30:30:72.25:1722,72,0	0/0:8,0:8:21.07:0,21,683	0/0:9,0:9:14.27:0,14,267	0/0:15,0:14:42.03:0,42,809	0/0:23,0:23:63.21:0,63,2069	0/0:24,0:24:66.22:0,66,2133	0/0:24,0:24:69.20:0,69,2056	0/0:38,0:38:99:0,111,3362	0/0:19,0:19:51.17:0,51,1632	0/0:28,0:28:84.27:0,84,2557	0/0:38,0:38:99:0,108,3097	0/0:19,0:19:57.20:0,57,1884	0/0:20,0:20:57.19:0,57,1782	0/0:27,0:27:72.24:0,72,2370	0/0:41,0:41:99:0,120,3746	0/0:20,0:20:60.21:0,60,1929	1/1:1,16:16:36.12:830,36,0	1/1:0,8:8:9.03:216,9,0	1/1:0,21:21:60.14:1123,60,0	1/1:1,35:36:93.24:2020,93,0	1/1:1,6:6:3.01:71,3,0	0/0:10,0:10:30.09:0,30,901	0/0:17,0:17:51.17:0,51,1612	0/0:16,0:16:45.13:0,45,1330	0/0:24,0:24:72.23:0,72,2307	0/0:31,0:31:93.30:0,93,2944	0/0:23,0:23:60.15:0,60,1784	0/0:19,0:19:48.15:0,48,1469
chr10	24684541	.	GT	G	205.23	PASS	AB=1.000;AC=10;AF=0.179;AN=56;BaseQRankSum=13.399;DP=628;FS=11.427;HRun=10;HaplotypeScore=113.8496;InbreedingCoeff=0.7217;MQ=68.41;MQ0=3;MQRankSum=-13.359;QD=1.53;ReadPosRankSum=0.946;VQSLOD=-0.5418;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:32,0:32:43.48:122,43,0	0/0:7,0:7:18.05:0,18,199	0/0:13,0:12:16.26:0,16,153	0/0:17,0:16:31.44:0,31,255	0/0:21,1:22:37.09:0,37,620	0/0:23,1:24:34.08:0,34,587	0/0:21,0:22:56.99:0,57,611	0/0:39,0:39:99:0,102,1097	0/0:19,0:19:47.92:0,48,511	0/0:25,0:25:62.61:0,63,695	0/0:32,2:34:32.10:0,32,779	0/0:19,0:19:54.14:0,54,596	0/0:26,0:26:66.16:0,66,721	0/0:25,0:25:65.46:0,65,689	0/0:43,0:43:99:0,111,1209	0/0:22,0:22:57.14:0,57,622	1/1:20,0:19:22.08:64,22,0	0/1:11,0:11:9.08:9,0,15	0/1:25,0:25:19.89:32,0,20	1/1:38,0:38:45.32:127,45,0	1/1:8,0:7:3.37:9,3,0	0/0:9,0:9:24.06:0,24,265	0/0:19,0:19:45.10:0,45,487	0/0:14,0:14:33.07:0,33,355	0/0:25,0:25:69.18:0,69,757	0/0:32,0:32:90.24:0,90,993	0/0:20,1:21:31.05:0,31,556	0/0:17,0:17:36.03:0,36,376
chr10	24686054	.	T	TC	2735.97	PASS	AB=0.957;AC=13;AF=0.232;AN=56;BaseQRankSum=-11.026;DP=626;FS=2.494;HRun=8;HaplotypeScore=62.5135;InbreedingCoeff=0.8607;MQ=81.59;MQ0=0;MQRankSum=-0.657;QD=19.54;ReadPosRankSum=-2.735;VQSLOD=2.8284;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:0,0:18:28.52:0,29,84	0/0:8,0:8:21.01:0,21,191	0/1:21,1:22:27.81:28,0,313	0/0:23,0:23:32.90:0,33,288	0/0:23,0:23:54.01:0,54,490	0/0:32,0:32:90:0,90,812	0/0:20,0:21:53.04:0,53,467	1/1:12,24:36:44.70:739,45,0	0/0:22,0:22:60.02:0,60,549	0/0:26,0:27:68.05:0,68,610	0/0:19,0:19:54.02:0,54,494	0/0:25,0:25:72.04:0,72,658	0/0:25,0:25:60.01:0,60,549	0/0:24,0:24:72.03:0,72,655	0/0:34,0:34:93.03:0,93,851	0/0:28,0:28:81.04:0,81,741	1/1:0,12:12:30.09:346,30,0	1/1:4,11:15:30.09:346,30,0	1/1:6,9:15:2.62:284,3,0	1/1:1,21:22:51.15:588,51,0	1/1:0,18:18:51.15:589,51,0	0/0:22,0:22:60.03:0,60,547	0/0:26,0:26:69.02:0,69,627	0/0:16,0:17:48:0,48,433	0/0:20,0:20:48.01:0,48,438	0/0:30,0:30:87.02:0,87,788	0/0:31,0:31:78.02:0,78,709	0/0:11,0:11:33.02:0,33,302
chr10	24686439	.	TC	T	87.69	PASS	AB=0.647;AC=1;AF=0.019;AN=52;BaseQRankSum=2.055;DP=309;FS=3.614;HRun=4;HaplotypeScore=48.7397;InbreedingCoeff=-0.0254;MQ=44.50;MQ0=12;MQRankSum=-1.497;QD=7.97;ReadPosRankSum=-0.691;VQSLOD=0.0145;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:5,6:10:22.76:162,0,23	0/0:3,0:3:9.03:0,9,126	./.	./.	0/0:15,0:13:14.22:0,14,283	0/0:7,0:6:15.05:0,15,210	0/0:5,0:5:15.04:0,15,193	0/0:20,0:20:50.90:0,51,703	0/0:8,0:7:18.06:0,18,252	0/0:17,0:17:48.16:0,48,672	0/0:15,0:13:27.09:0,27,364	0/0:13,0:13:35.95:0,36,476	0/0:11,0:11:33.11:0,33,454	0/0:17,0:17:42.14:0,42,586	0/0:16,0:15:33.11:0,33,461	0/0:11,0:11:21.03:0,21,272	0/0:19,0:18:45.15:0,45,629	0/0:3,0:3:9.03:0,9,126	0/0:24,0:20:57.14:0,57,764	0/0:12,0:12:27.09:0,27,375	0/0:9,0:8:24.08:0,24,336	0/0:7,0:7:18.06:0,18,247	0/0:11,0:11:30.09:0,30,395	0/0:11,0:11:21.07:0,21,292	0/0:9,0:8:14.40:0,14,209	0/0:10,0:10:27.09:0,27,378	0/0:18,0:18:48.15:0,48,655	0/0:4,0:3:6.02:0,6,84
chr10	24686450	.	G	GAA	5705.46	PASS	AB=1.000;AC=53;AF=0.946;AN=56;BaseQRankSum=-1.439;DP=458;FS=0.000;HRun=16;HaplotypeScore=154.5983;InbreedingCoeff=0.4827;MQ=42.09;MQ0=12;MQRankSum=0.092;QD=12.82;ReadPosRankSum=-0.418;VQSLOD=2.2561;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:17,4:21:35.43:335,35,0	1/1:4,0:4:9.87:82,10,0	0/1:7,0:3:0:0,0,0	0/0:12,0:4:2.22:0,2,7	1/1:21,0:22:39.45:372,39,0	1/1:16,0:18:42.02:404,42,0	1/1:8,0:10:19.22:166,19,0	1/1:30,1:33:51.72:392,52,0	1/1:12,1:12:14.16:105,14,0	1/1:18,0:20:26.99:256,27,0	1/1:20,0:21:35.98:330,36,0	1/1:13,0:14:24.71:198,25,0	1/1:11,0:14:18.03:178,18,0	1/1:14,1:15:23.76:213,24,0	1/1:15,0:21:19.45:272,19,0	1/1:15,1:18:34.72:333,35,0	1/1:18,2:21:17.48:161,17,0	1/1:5,0:5:4.80:27,5,0	1/1:14,1:17:24.17:192,24,0	1/1:15,4:20:25.21:235,25,0	1/1:6,0:5:2.97:20,3,0	1/1:13,0:14:14.50:111,15,0	1/1:9,0:11:15.03:150,15,0	1/1:8,0:12:17.98:165,18,0	1/1:12,2:14:24.03:244,24,0	1/1:28,0:27:39.46:362,39,0	1/1:14,1:20:32.80:313,33,0	1/1:4,1:6:9.01:86,9,0
chr10	24686471	.	C	CAAAA	8706.54	PASS	AB=0.673;AC=50;AF=0.893;AN=56;BaseQRankSum=-4.505;DP=514;FS=11.741;HRun=11;HaplotypeScore=106.7257;InbreedingCoeff=0.6219;MQ=57.54;MQ0=12;MQRankSum=-4.081;QD=18.97;ReadPosRankSum=2.514;VQSLOD=1.9918;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:13,1:26:29.59:376,30,0	1/1:1,3:5:15.05:285,15,0	0/0:32,0:12:32.29:0,32,402	0/0:23,0:11:8.47:0,8,166	1/1:15,10:26:35.52:594,36,0	1/1:7,11:19:32.71:628,33,0	1/1:7,2:10:10.59:202,11,0	0/1:20,0:37:11:11,0,92	1/1:3,2:6:9.03:176,9,0	1/1:8,10:20:39.11:766,39,0	1/1:13,7:26:44.13:659,44,0	1/1:12,3:13:21.93:377,22,0	1/1:7,4:13:8.64:133,9,0	1/1:8,5:14:11.33:152,11,0	1/1:15,7:24:26.18:476,26,0	1/1:13,6:22:17.98:364,18,0	1/1:8,0:18:4.67:157,5,0	1/1:6,0:11:9.73:65,10,0	1/1:9,0:20:19.50:130,19,0	1/1:10,0:19:28.22:180,28,0	0/1:1,0:2:0:0,0,0	1/1:9,3:13:14.54:224,15,0	1/1:6,10:16:21.15:412,21,0	1/1:5,5:10:20.68:337,21,0	1/1:9,0:12:18.36:185,18,0	1/1:13,13:28:51.21:914,51,0	1/1:20,1:21:34.76:567,35,0	1/1:2,3:7:17.73:333,18,0
chr10	24686910	.	C	CCT	894.37	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-2.445;DP=816;FS=14.006;HRun=0;HaplotypeScore=149.3481;InbreedingCoeff=0.9926;MQ=67.80;MQ0=3;MQRankSum=1.179;QD=23.54;ReadPosRankSum=-3.951;VQSLOD=2.5561;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:90.29:0,90,1128	0/0:10,0:10:21.05:0,21,252	0/0:44,0:29:51.13:0,51,607	0/0:60,0:38:23.16:0,23,464	0/0:27,0:27:69.21:0,69,857	0/0:21,0:21:54.17:0,54,679	0/0:29,0:29:75.23:0,75,933	1/1:16,19:38:63.18:989,63,0	0/0:23,0:23:53.94:0,54,665	0/0:16,0:16:42.13:0,42,530	0/0:30,0:30:60.18:0,60,742	0/0:32,0:32:87.27:0,87,1085	0/0:36,0:36:87.25:0,87,1052	0/0:23,0:23:63.17:0,63,764	0/0:41,1:42:67.69:0,68,1362	0/0:38,0:38:99:0,102,1226	0/0:35,0:33:65.89:0,66,799	0/0:24,0:24:51.07:0,51,625	0/0:25,0:25:60.19:0,60,757	0/0:19,0:19:42.13:0,42,524	0/0:32,0:32:84.27:0,84,1060	0/0:22,0:22:60.16:0,60,720	0/0:23,0:23:54.16:0,54,668	0/0:33,0:33:64.07:0,64,862	0/0:23,0:22:60.17:0,60,741	0/0:31,0:31:78.24:0,78,974	0/0:28,0:28:63.20:0,63,794	0/0:14,0:14:27.98:0,28,371
chr10	24687111	.	CT	C	3698.87	PASS	AB=0.715;AC=45;AF=0.804;AN=56;BaseQRankSum=-0.344;DP=616;FS=4.386;HRun=15;HaplotypeScore=87.2644;InbreedingCoeff=0.5812;MQ=70.31;MQ0=1;MQRankSum=-0.967;QD=6.86;ReadPosRankSum=4.142;VQSLOD=3.1270;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:31:36.58:106,37,0	1/1:2,3:5:8.84:58,9,0	0/0:25,3:21:12:0,12,147	0/1:13,1:8:14.10:28,0,14	1/1:9,10:21:21.34:119,21,0	1/1:7,17:28:4.58:243,5,0	0/1:9,7:19:8.35:103,0,8	1/1:11,0:34:36.99:106,37,0	1/1:7,15:22:6.15:166,6,0	1/1:14,11:26:31.34:195,31,0	1/1:4,19:24:41.17:269,41,0	1/1:4,15:20:34.52:217,35,0	1/1:9,16:26:26.35:172,26,0	1/1:6,11:19:6.23:132,6,0	1/1:13,26:43:63.93:388,64,0	0/1:5,19:25:6.35:209,0,6	1/1:5,0:19:20.34:58,20,0	1/1:3,0:11:15.36:44,15,0	1/1:2,0:14:20.34:58,20,0	1/1:2,0:18:21.99:63,22,0	1/1:3,0:11:10:28,10,0	1/1:6,17:26:43.87:265,44,0	1/1:8,19:28:10.97:190,11,0	1/1:6,13:21:15.81:216,16,0	1/1:8,24:34:22.78:265,23,0	0/0:4,1:16:21.61:0,22,222	0/0:12,0:27:34.19:0,34,193	0/0:5,0:6:9.72:0,10,66
chr10	24687463	.	AGTGT	A	2244.67	PASS	AB=0.857;AC=33;AF=0.688;AN=48;BaseQRankSum=-3.668;DP=446;FS=7.441;HRun=0;HaplotypeScore=84.2898;InbreedingCoeff=0.6045;MQ=66.47;MQ0=21;MQRankSum=1.195;QD=8.60;ReadPosRankSum=1.114;VQSLOD=1.7185;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:17:6:0,6,67	1/1:9,0:9:8.87:102,9,0	./.	./.	./.	1/1:18,0:17:21.05:261,21,0	1/1:17,0:20:2.61:34,3,0	0/0:21,0:20:3.48:0,3,36	1/1:8,0:8:3.01:45,3,0	1/1:14,0:14:12.04:160,12,0	1/1:12,0:12:6.02:78,6,0	1/1:14,0:13:8.99:132,9,0	1/1:13,0:13:12.04:148,12,0	1/1:15,0:15:6.02:88,6,0	1/1:26,0:26:27.04:362,27,0	1/1:13,0:13:12.01:140,12,0	0/0:21,0:20:18.03:0,18,259	0/0:11,0:8:5.93:0,6,59	0/0:15,0:15:6.02:0,6,106	0/0:15,0:14:9.03:0,9,136	0/0:10,0:10:9.03:0,9,134	1/1:16,0:17:12.04:161,12,0	./.	1/1:18,0:16:18.01:238,18,0	1/1:26,0:23:21.01:272,21,0	0/1:15,0:17:9.46:71,0,9	1/1:11,0:11:5.01:77,5,0	1/1:9,0:7:3.01:41,3,0
chr10	24688163	.	G	GTTA	2052.07	PASS	AB=0.667;AC=33;AF=0.750;AN=44;BaseQRankSum=0.166;DP=258;FS=0.000;HRun=0;HaplotypeScore=39.4410;InbreedingCoeff=0.4337;MQ=73.98;MQ0=0;MQRankSum=-1.400;QD=10.80;ReadPosRankSum=-1.087;VQSLOD=2.0414;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:5:6.02:0,6,80	./.	./.	0/0:6,0:6:0:0,0,0	1/1:4,0:7:3.01:35,3,0	0/1:6,6:12:21.77:271,0,22	1/1:3,0:3:3.01:39,3,0	1/1:50,0:50:34.23:362,34,0	./.	1/1:14,0:14:15:177,15,0	1/1:14,0:14:6.02:75,6,0	1/1:2,5:7:9.03:174,9,0	1/1:2,3:5:6.02:116,6,0	1/1:3,4:7:12.04:231,12,0	1/1:8,2:10:6.02:116,6,0	1/1:4,3:7:6.02:116,6,0	1/1:15,0:14:8.15:75,8,0	1/1:6,1:10:8.92:114,9,0	1/1:6,0:7:3.01:39,3,0	1/1:9,0:9:6.02:98,6,0	./.	./.	./.	1/1:1,1:2:3.01:58,3,0	1/1:11,0:11:6.02:90,6,0	0/0:7,0:7:9.03:0,9,119	0/0:9,0:9:12.04:0,12,159	0/0:9,0:9:3.01:0,3,40
chr10	24689629	.	GT	G	6105.38	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=6.538;DP=447;FS=3.178;HRun=10;HaplotypeScore=53.7631;InbreedingCoeff=0.9492;MQ=79.85;MQ0=2;MQRankSum=-0.800;QD=19.89;ReadPosRankSum=1.960;VQSLOD=5.8351;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:78.18:0,78,846	1/1:0,10:10:26.99:234,27,0	0/0:22,0:16:8.61:0,9,121	0/0:21,0:13:22.36:0,22,159	1/1:2,23:25:68.97:598,69,0	1/1:0,14:14:38.99:339,39,0	1/1:1,7:8:21:182,21,0	1/1:7,0:30:46.85:138,47,0	1/1:1,9:10:6.49:211,6,0	1/1:3,13:16:41.98:364,42,0	1/1:1,17:18:53.95:460,54,0	1/1:1,14:15:32.99:287,33,0	1/1:3,8:11:17.96:156,18,0	1/1:0,8:8:21:182,21,0	1/1:3,13:16:32.99:287,33,0	1/1:3,21:24:59.97:521,60,0	0/0:21,0:21:54.15:0,54,597	0/0:8,0:8:21.03:0,21,218	0/0:19,0:19:54.15:0,54,597	0/0:15,0:15:45.09:0,45,475	0/0:5,0:5:15.03:0,15,158	1/1:1,6:7:14.99:130,15,0	1/1:3,15:18:38.98:338,39,0	1/1:0,4:4:12:104,12,0	1/1:0,21:21:50.99:443,51,0	1/1:1,22:23:65.94:566,66,0	1/1:4,22:26:29.77:488,30,0	1/1:0,3:3:9:78,9,0
chr10	24692149	.	A	ATC	715.35	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.876;DP=800;FS=7.120;HRun=0;HaplotypeScore=96.1801;InbreedingCoeff=0.9954;MQ=88.90;MQ0=0;MQRankSum=-4.660;QD=42.08;ReadPosRankSum=0.529;VQSLOD=4.9876;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,15:17:45.15:810,45,0	0/0:22,0:22:57.19:0,57,796	0/0:36,0:36:99:0,102,1379	0/0:34,0:34:90.27:0,90,1216	0/0:38,0:38:99:0,105,1452	0/0:32,0:32:69.21:0,69,947	0/0:24,0:24:72.21:0,72,971	0/0:41,0:41:99:0,111,1474	0/0:30,0:30:90.29:0,90,1242	0/0:34,0:34:99:0,99,1356	0/0:23,0:23:66.20:0,66,906	0/0:41,0:41:99:0,117,1635	0/0:38,0:38:99:0,111,1537	0/0:29,0:29:84.25:0,84,1141	0/0:30,0:30:87.28:0,87,1200	0/0:29,0:29:84.28:0,84,1177	0/0:18,0:18:51.16:0,51,697	0/0:8,0:8:21.07:0,21,294	0/0:13,0:13:30.09:0,30,406	0/0:30,0:30:81.27:0,81,1135	0/0:26,0:26:75.17:0,75,1004	0/0:25,0:25:69.22:0,69,949	0/0:27,0:27:69.23:0,69,961	0/0:28,0:28:81.23:0,81,1096	0/0:31,0:31:87.22:0,87,1158	0/0:34,0:34:99:0,102,1424	0/0:41,0:39:99:0,114,1582	0/0:21,0:21:39.11:0,39,526
chr10	24694144	.	GAA	G	12440.65	PASS	AB=0.760;AC=42;AF=0.750;AN=56;BaseQRankSum=-14.450;DP=624;FS=1.250;HRun=11;HaplotypeScore=88.7568;InbreedingCoeff=0.7959;MQ=69.85;MQ0=3;MQRankSum=-1.683;QD=24.88;ReadPosRankSum=0.769;VQSLOD=4.8873;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:1,2:13:35.39:35,0,49	1/1:3,10:13:30.07:319,30,0	0/0:10,0:10:9.03:0,9,131	0/1:14,0:11:9.77:10,0,184	1/1:3,41:45:99:1173,105,0	1/1:2,23:24:66.16:702,66,0	1/1:4,18:22:51.11:543,51,0	1/1:4,17:22:51.08:531,51,0	1/1:2,15:17:42.10:447,42,0	1/1:2,26:28:78.15:812,78,0	1/1:3,17:20:42.07:447,42,0	1/1:0,20:20:54.14:575,54,0	1/1:0,27:28:69.12:790,69,0	1/1:0,24:24:66.17:702,66,0	1/1:2,25:27:63.14:671,63,0	1/1:1,24:25:60.15:639,60,0	0/0:3,0:26:57.39:0,57,197	0/0:5,0:23:23.85:0,24,130	0/0:4,1:19:9.52:0,10,121	0/0:6,0:35:61.03:0,61,265	0/0:1,0:11:22.92:0,23,88	1/1:2,12:15:24:311,24,0	1/1:1,19:20:48.12:511,48,0	1/1:2,17:18:36.08:383,36,0	1/1:2,29:31:78.19:830,78,0	1/1:2,24:26:69.17:734,69,0	1/1:3,33:36:90.22:958,90,0	1/1:0,10:10:30.08:319,30,0
chr10	24694762	.	AT	A	6590.98	PASS	AC=50;AF=0.926;AN=54;BaseQRankSum=-5.429;DP=419;FS=12.694;HRun=9;HaplotypeScore=41.7559;InbreedingCoeff=0.7003;MQ=66.81;MQ0=9;MQRankSum=2.126;QD=18.99;ReadPosRankSum=2.918;VQSLOD=3.9403;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,7:10:15:137,15,0	1/1:2,6:8:12:109,12,0	0/0:35,0:11:13.71:0,14,117	0/0:35,0:16:9.91:0,10,189	1/1:0,22:22:57.03:520,57,0	1/1:0,16:16:36.02:329,36,0	1/1:1,10:11:15.01:137,15,0	1/1:7,32:39:93:844,93,0	1/1:0,4:4:6:55,6,0	1/1:0,12:12:36.02:330,36,0	1/1:4,6:10:23.85:206,24,0	1/1:0,5:5:6:55,6,0	1/1:3,12:14:21.01:192,21,0	1/1:1,7:8:12.01:110,12,0	1/1:2,7:9:9:82,9,0	1/1:2,5:7:15.01:137,15,0	1/1:4,23:27:49.89:536,50,0	1/1:2,22:24:60.03:549,60,0	1/1:6,15:21:45:407,45,0	1/1:0,10:10:27.01:246,27,0	./.	1/1:1,2:3:6:55,6,0	1/1:3,2:5:5.99:55,6,0	1/1:0,6:6:9:82,9,0	1/1:4,19:23:45.02:412,45,0	1/1:1,19:20:57:512,57,0	1/1:4,15:19:24.01:219,24,0	1/1:0,13:13:30.02:275,30,0
chr10	24697903	.	TA	T	1834.66	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=2.919;DP=536;FS=4.337;HRun=8;HaplotypeScore=61.4426;InbreedingCoeff=0.9711;MQ=79.89;MQ0=0;MQRankSum=0.029;QD=20.61;ReadPosRankSum=-1.475;VQSLOD=3.3584;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:36.08:0,36,411	0/0:11,0:11:27.08:0,27,326	0/0:21,0:21:45.14:0,45,535	0/0:12,0:12:15.05:0,15,181	0/0:27,0:27:75.23:0,75,900	0/0:17,0:17:48.14:0,48,569	0/0:15,0:15:39.11:0,39,460	1/1:1,14:15:42.01:384,42,0	0/0:15,0:15:45.13:0,45,533	0/0:36,0:36:99:0,99,1188	0/0:23,0:23:57.17:0,57,689	0/0:20,0:20:57.17:0,57,689	0/0:27,0:27:78.20:0,78,918	0/0:19,0:19:54.17:0,54,652	0/0:20,0:20:60.17:0,60,714	0/0:16,0:16:45.14:0,45,543	1/1:3,11:14:24.03:232,24,0	1/1:0,5:5:15.02:145,15,0	1/1:4,15:19:45.03:426,45,0	1/1:4,29:33:81.08:773,81,0	1/1:0,3:3:6.01:58,6,0	0/0:20,0:20:51.14:0,51,595	0/0:17,0:17:39.11:0,39,459	0/0:10,0:10:30.08:0,30,350	0/0:30,0:30:81.25:0,81,978	0/0:23,0:23:66.19:0,66,787	0/0:34,0:34:90.26:0,90,1072	0/0:19,0:19:54.17:0,54,650
chr10	24699512	.	CA	C	17486.82	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=0.539;DP=673;FS=5.539;HRun=6;HaplotypeScore=73.1835;InbreedingCoeff=0.9614;MQ=75.47;MQ0=0;MQRankSum=-5.029;QD=27.67;ReadPosRankSum=2.953;VQSLOD=5.6260;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:30.10:0,30,395	1/1:3,16:19:48.12:516,48,0	0/0:14,0:14:6.07:0,6,363	0/0:15,0:14:30.07:0,30,367	1/1:3,32:35:93.23:998,93,0	1/1:3,25:28:66.17:709,66,0	1/1:0,17:17:48.12:516,48,0	1/1:6,35:41:99:1128,105,0	1/1:2,23:25:63.16:677,63,0	1/1:4,28:32:84.21:901,84,0	1/1:0,15:15:42.10:449,42,0	1/1:2,15:17:39.10:419,39,0	1/1:1,29:30:77.98:838,78,0	1/1:3,23:26:57.14:612,57,0	1/1:3,24:27:69.17:742,69,0	1/1:3,29:32:78.19:838,78,0	1/1:2,23:25:69.17:741,69,0	1/1:1,16:17:48.12:516,48,0	1/1:1,16:17:48.08:498,48,0	1/1:1,33:34:96.24:1030,96,0	1/1:1,13:14:39.10:419,39,0	1/1:2,24:26:69.17:742,69,0	1/1:2,20:22:60.15:643,60,0	1/1:1,13:14:39.10:419,39,0	1/1:3,27:30:63.16:677,63,0	1/1:6,33:39:99:1045,99,0	1/1:2,31:32:54.30:928,54,0	1/1:0,17:17:45.11:484,45,0
chr10	24700301	.	TGAGAGAGAGAGGGAGA	T	4963.77	PASS	AB=0.901;AC=44;AF=0.815;AN=54;BaseQRankSum=5.168;DP=521;FS=15.727;HRun=0;HaplotypeScore=230.5004;InbreedingCoeff=0.3992;MQ=75.27;MQ0=6;MQRankSum=0.268;QD=11.06;ReadPosRankSum=4.626;VQSLOD=2.1293;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:41.83:0,42,597	1/1:5,0:5:3.01:68,3,0	0/1:32,0:23:51.72:52,0,122	0/1:49,0:31:85.03:85,0,92	1/1:18,2:20:17.17:117,17,0	1/1:4,21:25:10.67:66,11,0	1/1:19,0:19:11.61:75,12,0	0/0:28,0:28:56.65:0,57,576	1/1:13,0:13:3.01:93,3,0	0/1:8,12:20:20.55:327,0,21	1/1:19,3:22:35.58:245,36,0	1/1:7,20:26:8.95:246,9,0	1/1:9,2:12:32.85:537,33,0	1/1:14,2:16:23.65:174,24,0	1/1:16,5:21:43.59:282,44,0	1/1:15,1:16:23.16:384,23,0	1/1:10,0:11:19.57:119,20,0	1/1:6,1:7:14.89:268,15,0	1/1:11,0:11:23.86:232,24,0	1/1:15,2:18:7.83:95,8,0	1/1:13,0:13:8.93:64,9,0	./.	1/1:14,0:14:26.87:251,27,0	0/1:4,0:13:0:0,0,0	1/1:12,1:13:0.25:154,0,0	1/1:3,23:26:22.87:467,23,0	1/1:25,0:25:41.56:564,42,0	0/0:3,0:2:3:0,3,27
chr10	24700303	.	AGAGAGAGAGG	A	4199.13	PASS	AB=1.000;AC=46;AF=0.821;AN=56;BaseQRankSum=6.333;DP=523;FS=10.922;HRun=0;HaplotypeScore=196.8342;InbreedingCoeff=0.3828;MQ=74.67;MQ0=7;MQRankSum=-1.052;QD=9.25;ReadPosRankSum=4.459;VQSLOD=1.4617;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:36.58:0,37,379	1/1:1,4:5:3.01:32,3,0	0/1:32,0:23:64.27:64,0,120	0/1:50,0:31:76.80:77,0,99	0/1:21,0:21:25.57:97,0,26	1/1:24,1:25:10.46:50,10,0	1/1:19,0:19:11.61:75,12,0	0/0:27,0:27:56.95:0,57,496	1/1:1,12:13:2.96:62,3,0	1/1:16,0:16:12.96:262,13,0	1/1:23,0:23:37.96:254,38,0	1/1:27,0:26:8.95:176,9,0	1/1:12,0:12:31.10:387,31,0	1/1:15,0:15:20.64:132,21,0	1/1:22,0:22:43.41:282,43,0	1/1:16,1:17:34.95:360,35,0	1/1:12,0:12:18.62:117,19,0	1/1:6,1:7:11.92:188,12,0	1/1:11,0:11:23.86:212,24,0	1/1:19,0:19:4.95:80,5,0	1/1:13,0:13:10.18:67,10,0	0/0:18,0:18:3.01:0,3,47	1/1:15,0:14:26.79:190,27,0	0/1:13,0:13:0:0,0,0	1/1:14,0:14:3.06:157,3,0	1/1:25,0:25:20.21:381,20,0	1/1:24,1:25:47.75:480,48,0	1/1:3,0:2:2.92:17,3,0
chr10	24700309	.	AGAGG	A	3901.71	PASS	AB=1.000;AC=45;AF=0.804;AN=56;BaseQRankSum=5.754;DP=499;FS=9.115;HRun=0;HaplotypeScore=164.5873;InbreedingCoeff=0.4803;MQ=71.17;MQ0=7;MQRankSum=-0.975;QD=9.12;ReadPosRankSum=2.011;VQSLOD=2.4005;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:25:40.66:0,41,306	0/0:4,0:4:1.25:0,1,3	0/1:30,0:21:59.81:60,0,120	0/1:46,0:28:77.47:77,0,93	1/1:15,2:17:4.66:102,5,0	1/1:22,1:23:10.27:49,10,0	1/1:18,0:18:11.61:75,12,0	0/0:24,0:24:39.09:0,39,436	1/1:13,0:13:2.80:46,3,0	1/1:18,0:18:38.69:316,39,0	1/1:20,2:22:36.47:248,36,0	1/1:26,0:25:11.91:123,12,0	1/1:10,3:12:31.01:266,31,0	1/1:12,2:14:26.55:169,27,0	1/1:20,0:20:46.41:307,46,0	1/1:17,1:18:34.99:267,35,0	1/1:9,0:9:22.25:137,22,0	1/1:5,1:6:12.39:127,12,0	1/1:8,0:8:23.86:192,24,0	1/1:18,1:19:5.63:81,6,0	1/1:11,1:12:11.87:82,12,0	0/0:2,14:16:2.74:0,3,12	1/1:15,1:15:26.79:190,27,0	0/1:12,0:12:0:0,0,0	1/1:14,0:14:3.99:159,4,0	1/1:24,0:24:42.08:407,42,0	1/1:23,3:26:41.34:386,41,0	1/1:1,2:2:3.01:37,3,0
chr10	24700311	.	AGG	A	3569.77	PASS	AB=0.992;AC=48;AF=0.857;AN=56;BaseQRankSum=5.856;DP=489;FS=1.246;HRun=3;HaplotypeScore=155.5171;InbreedingCoeff=0.3017;MQ=69.24;MQ0=9;MQRankSum=-1.156;QD=7.73;ReadPosRankSum=1.462;VQSLOD=0.3557;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:24:22.57:23,0,213	1/1:4,0:4:2.74:12,3,0	0/1:29,0:21:51.95:52,0,123	0/1:43,0:24:73.44:73,0,96	1/1:15,0:15:20.38:142,20,0	1/1:23,0:23:10.27:49,10,0	1/1:1,17:18:11.61:75,12,0	0/0:23,0:23:38.14:0,38,437	1/1:13,0:13:2.80:16,3,0	1/1:17,0:17:38.80:294,39,0	1/1:21,1:22:36.05:246,36,0	1/1:25,0:24:14.81:102,15,0	1/1:13,0:12:30.61:190,31,0	1/1:13,1:14:25.64:157,26,0	1/1:19,1:20:46.52:307,47,0	1/1:17,1:18:33.93:213,34,0	1/1:8,0:8:23.07:141,23,0	1/1:6,0:6:14.06:78,14,0	1/1:8,0:8:23.35:161,23,0	1/1:19,0:19:5.92:81,6,0	1/1:12,0:12:11.87:82,12,0	1/1:17,0:16:2.99:24,3,0	1/1:14,1:14:26.79:190,27,0	0/1:12,0:12:0:0,0,0	1/1:14,0:14:4.04:159,4,0	1/1:24,0:24:42.15:382,42,0	1/1:24,2:26:45.94:320,46,0	0/0:4,0:2:2.37:0,2,8
chr10	24700356	.	GACAGAGACAGAGAC	G	2825.75	PASS	AB=0.996;AC=30;AF=0.577;AN=52;BaseQRankSum=-2.053;DP=447;FS=17.719;HRun=0;HaplotypeScore=214.3150;InbreedingCoeff=0.0330;MQ=37.58;MQ0=21;MQRankSum=3.001;QD=8.03;ReadPosRankSum=-2.959;VQSLOD=0.7689;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:15,0:12:14.95:15,0,298	0/0:4,0:4:2.04:0,2,6	1/1:6,0:1:0.47:1,0,0	./.	0/1:21,0:21:36.55:167,0,37	1/1:26,0:25:12.25:153,12,0	0/1:10,0:8:20.31:20,0,54	1/1:4,0:1:3.01:60,3,0	1/1:13,0:13:13.10:235,13,0	0/1:18,0:18:99:245,0,293	1/1:26,0:26:16.66:101,17,0	1/1:21,0:19:3.92:129,4,0	0/1:17,0:16:56.19:198,0,56	0/1:11,0:11:81.22:81,0,90	1/1:19,0:19:6.10:151,6,0	1/1:15,0:14:18.29:182,18,0	0/0:14,0:14:26.24:0,26,239	0/1:14,0:13:20.54:21,0,238	0/0:18,0:16:35.29:0,35,589	0/0:22,0:22:40.69:0,41,448	0/0:11,0:9:2.71:0,3,41	0/1:16,0:14:27:70,0,27	1/1:13,11:23:0.46:2,0,0	./.	1/1:23,0:19:21.03:241,21,0	0/1:27,0:27:99:651,0,309	0/1:25,0:26:61.85:266,0,62	0/0:3,0:2:6.01:0,6,55
chr10	24700364	.	C	CAG	49.32	PASS	AB=0.989;AC=12;AF=0.214;AN=56;BaseQRankSum=0.894;DP=469;FS=2.281;HRun=0;HaplotypeScore=173.5955;InbreedingCoeff=0.1444;MQ=40.82;MQ0=22;MQRankSum=-0.844;QD=0.30;ReadPosRankSum=-0.048;VQSLOD=2.9746;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:11:14.98:0,15,202	0/0:5,0:5:2.88:0,3,30	0/1:14,0:3:0.01:0,0,0	0/0:25,0:5:3.18:0,3,16	0/1:20,0:20:2.21:2,0,48	0/1:26,0:25:9.04:9,0,59	0/0:10,1:9:7.73:0,8,51	0/1:5,0:2:0:0,0,0	0/0:13,0:13:9.76:0,10,84	0/0:17,0:17:10.81:0,11,199	0/0:28,1:29:14.63:0,15,87	1/1:23,0:21:10.82:74,11,0	0/1:16,0:15:20.13:20,0,103	0/1:9,1:10:33.22:33,0,70	0/1:20,0:20:6.65:7,0,58	0/0:15,0:14:12.70:0,13,96	0/0:16,0:16:19.66:0,20,117	0/0:14,0:13:17.52:0,18,136	0/0:16,0:14:31.54:0,32,283	0/0:21,0:21:36.25:0,36,197	0/0:10,0:8:1.72:0,2,5	0/0:13,0:11:8.68:0,9,53	0/0:24,0:23:0.26:0,0,1	1/1:8,0:8:0.47:1,0,0	0/1:25,0:21:24.01:24,0,42	0/0:27,0:27:29.40:0,29,300	0/0:27,1:28:2.72:0,3,201	0/0:3,0:3:2.88:0,3,8
chr10	24700374	.	G	GAC	1880.16	PASS	AB=0.930;AC=14;AF=0.250;AN=56;BaseQRankSum=-3.237;DP=519;FS=10.049;HRun=0;HaplotypeScore=169.4683;InbreedingCoeff=0.4718;MQ=45.69;MQ0=23;MQRankSum=-1.470;QD=12.62;ReadPosRankSum=-0.012;VQSLOD=2.5033;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:18,0:15:1.91:2,0,72	0/0:7,0:7:8.92:0,9,67	0/0:25,0:7:10.83:0,11,96	0/0:38,0:10:4.45:0,4,39	0/0:22,0:22:19.62:0,20,207	0/0:28,0:29:29.71:0,30,300	0/1:13,0:11:5.40:5,0,91	0/0:12,0:10:26.68:0,27,197	0/0:14,0:14:26.98:0,27,288	0/0:15,0:15:32.03:0,32,337	0/0:30,0:30:27.81:0,28,304	0/0:19,0:17:3.52:0,4,71	0/0:17,0:16:24.49:0,24,250	0/1:13,0:13:9.72:10,0,107	0/0:22,0:22:22.57:0,23,240	0/0:15,0:14:17.33:0,17,191	1/1:3,18:22:23.15:541,23,0	0/1:5,13:17:3.74:312,0,4	1/1:5,4:8:7.57:230,8,0	1/1:5,16:21:45.98:821,46,0	1/1:1,8:9:5.79:111,6,0	0/0:11,0:10:14.93:0,15,172	0/1:22,0:21:0.12:0,0,0	0/0:10,0:10:3.45:0,3,23	0/0:28,0:24:30.32:0,30,293	0/0:27,0:27:36.96:0,37,536	0/0:29,0:29:55.02:0,55,523	0/1:3,0:3:4.77:5,0,18
chr10	24702006	.	G	GT	11952.33	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-8.939;DP=638;FS=3.968;HRun=8;HaplotypeScore=89.6051;InbreedingCoeff=0.9889;MQ=71.07;MQ0=1;MQRankSum=-0.646;QD=28.26;ReadPosRankSum=2.587;VQSLOD=5.0475;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:54.02:0,54,494	1/1:0,4:4:12.04:138,12,0	0/0:28,0:21:11.60:0,12,359	0/0:11,0:11:26.80:0,27,232	1/1:3,32:36:93.03:1025,93,0	1/1:4,20:25:57.17:658,57,0	1/1:1,25:27:69.04:776,69,0	0/0:40,2:42:20.74:0,21,695	1/1:4,15:19:39.12:450,39,0	1/1:5,30:35:81.18:901,81,0	1/1:5,18:23:48.10:536,48,0	1/1:2,14:16:42.07:460,42,0	1/1:1,21:22:60.18:692,60,0	1/1:3,28:31:88.50:1007,89,0	1/1:2,20:21:57.17:658,57,0	1/1:2,21:23:48.14:554,48,0	0/0:26,0:26:65.96:0,66,602	0/0:15,0:15:45.02:0,45,412	0/0:19,0:19:45.02:0,45,411	0/0:29,0:29:84.05:0,84,768	0/0:22,0:22:54.43:0,54,484	1/1:1,14:15:39.12:450,39,0	1/1:6,22:29:63.01:706,63,0	1/1:0,17:17:48.14:554,48,0	1/1:2,20:22:57.17:655,57,0	1/1:1,20:21:60.18:693,60,0	1/1:4,21:25:60.18:693,60,0	1/1:0,11:11:30.09:346,30,0
chr10	24702078	.	CTA	C	185.94	PASS	AB=0.993;AC=11;AF=0.196;AN=56;BaseQRankSum=-2.803;DP=702;FS=1.954;HRun=0;HaplotypeScore=223.9026;InbreedingCoeff=-0.0660;MQ=83.47;MQ0=0;MQRankSum=-3.130;QD=0.71;ReadPosRankSum=-10.515;VQSLOD=0.1457;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:90.24:0,90,987	0/0:6,0:6:12.19:0,12,36	0/0:26,0:26:72.25:0,72,1431	0/0:20,0:20:54.19:0,54,1064	0/0:30,0:30:39.13:0,39,197	0/0:32,0:32:59.15:0,59,181	0/1:23,0:23:10.54:11,0,51	0/1:31,0:31:41.60:42,0,99	0/0:27,0:27:29.11:0,29,119	1/1:19,2:21:3.64:79,4,0	0/0:25,0:25:39.15:0,39,147	0/0:17,0:17:5.60:0,6,64	0/1:33,1:34:45.08:45,0,153	0/0:33,1:34:15.73:0,16,142	0/1:37,0:37:14.64:15,0,106	0/1:24,1:25:27.61:28,0,56	0/1:27,0:27:8.27:8,0,119	0/0:20,0:20:8.69:0,9,74	0/1:20,0:20:44.31:75,0,44	0/0:28,0:28:33.36:0,33,208	0/1:23,0:23:0.58:1,0,94	0/1:22,0:22:23.33:23,0,113	0/0:22,0:22:18.43:0,18,113	0/0:21,0:21:41.57:0,42,120	0/0:26,0:26:43.26:0,43,139	0/0:32,0:32:15.97:0,16,57	0/0:34,0:34:60.97:0,61,186	0/0:9,0:9:14.76:0,15,49
chr10	24702419	.	CGTGCGTGTGTGTGT	C	3013.71	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-3.600;DP=742;FS=0.000;HRun=0;HaplotypeScore=350.3001;InbreedingCoeff=0.9316;MQ=66.59;MQ0=5;MQRankSum=-4.955;QD=21.53;ReadPosRankSum=0.368;VQSLOD=1.3769;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:26.69:0,27,1260	0/0:9,0:9:12.51:0,13,439	0/0:20,0:15:38.23:0,38,362	0/0:22,0:19:28.69:0,29,275	0/0:26,0:26:69.21:0,69,3300	0/0:28,0:28:72.09:0,72,2363	0/0:36,0:35:27.09:0,27,1254	0/0:35,0:33:96.02:0,96,1608	0/0:26,0:25:63.16:0,63,2551	0/0:29,0:28:75.10:0,75,2017	0/0:10,0:10:21.04:0,21,631	0/0:38,0:38:98.87:0,99,3478	0/0:32,0:31:78.67:0,79,2700	0/0:18,0:18:45.14:0,45,1932	0/0:29,0:29:78.18:0,78,2401	0/0:27,0:26:69.68:0,70,2323	1/1:5,24:32:15.01:810,15,0	1/1:0,26:26:9.03:379,9,0	1/1:2,22:26:57.18:829,57,0	1/1:0,19:19:30.10:1140,30,0	1/1:6,31:35:2.94:18,3,0	0/0:21,0:21:41.73:0,42,1645	0/0:17,0:17:42.09:0,42,1338	0/0:38,0:37:93.69:0,94,3151	0/0:31,0:28:66.19:0,66,2554	0/0:33,0:32:92.99:0,93,3187	0/0:18,0:17:54.14:0,54,1674	0/0:15,0:15:42.08:0,42,1620
chr10	24702421	.	TGC	T	632.56	PASS	AB=0.988;AC=13;AF=0.232;AN=56;BaseQRankSum=0.735;DP=746;FS=3.595;HRun=0;HaplotypeScore=220.5005;InbreedingCoeff=0.7020;MQ=64.86;MQ0=5;MQRankSum=-3.977;QD=2.86;ReadPosRankSum=-5.598;VQSLOD=0.8466;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:48,0:48:5.06:5,0,92	0/1:9,0:9:4.24:17,0,4	0/0:19,0:14:38.23:0,38,303	0/0:20,0:17:28.60:0,29,239	0/0:27,0:27:71.99:0,72,812	0/1:26,1:27:8.46:8,0,431	0/0:36,0:35:23.15:0,23,274	0/0:34,0:32:36.22:0,36,544	0/0:25,0:24:32.15:0,32,573	0/0:28,1:28:43.42:0,43,592	0/0:10,0:10:19.82:0,20,184	0/0:37,1:38:81.20:0,81,945	0/0:32,1:32:32.54:0,33,571	0/0:18,1:19:33.90:0,34,422	0/0:30,0:30:71.03:0,71,622	0/0:25,0:24:50.25:0,50,556	1/1:32,0:32:19.06:142,19,0	1/1:26,0:26:8.93:63,9,0	1/1:26,0:26:28.28:346,28,0	1/1:19,0:19:29.70:203,30,0	1/1:34,0:32:2.94:18,3,0	0/0:23,0:23:36.07:0,36,409	0/0:17,0:17:33.09:0,33,375	0/0:40,0:39:51.67:0,52,631	0/0:31,0:28:64.89:0,65,618	0/0:36,1:36:97.35:0,97,934	0/0:18,0:17:12.20:0,12,323	0/0:14,0:14:35.44:0,35,374
chr10	24702423	.	C	CAT	5271.03	PASS	AB=0.899;AC=38;AF=0.679;AN=56;BaseQRankSum=-1.364;DP=745;FS=19.867;HRun=0;HaplotypeScore=206.9582;InbreedingCoeff=0.6221;MQ=62.03;MQ0=6;MQRankSum=6.610;QD=9.43;ReadPosRankSum=3.246;VQSLOD=3.2125;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:20,23:49:90.87:91,0,99	1/1:4,6:10:8.74:85,9,0	0/0:18,0:12:15.30:0,15,162	0/1:17,0:14:11.31:11,0,67	1/1:29,1:30:24.70:180,25,0	0/1:28,0:28:2.64:321,0,3	1/1:11,23:34:10.25:31,10,0	0/0:27,0:32:43.79:0,44,502	1/1:24,0:24:22.44:232,22,0	1/1:30,0:29:52.10:486,52,0	1/1:11,0:11:17.02:173,17,0	1/1:38,1:39:41.89:423,42,0	0/1:28,1:28:3.01:234,0,3	1/1:21,1:22:0.40:106,0,0	1/1:29,1:30:61.45:520,61,0	1/1:25,0:24:51.24:335,51,0	0/0:31,0:31:18.19:0,18,87	0/0:26,0:26:8.35:0,8,42	0/0:24,0:24:51.65:0,52,313	0/0:19,0:19:20.92:0,21,106	0/0:34,0:32:2.92:0,3,19	1/1:24,0:24:32.33:169,32,0	1/1:17,0:17:24.84:206,25,0	1/1:38,2:39:65.47:416,65,0	1/1:28,1:26:36.69:350,37,0	1/1:35,2:36:38.21:492,38,0	1/1:16,2:17:33.88:266,34,0	1/1:14,0:14:9.72:141,10,0
chr10	24702453	.	TGC	T	4910.96	PASS	AB=0.944;AC=25;AF=0.446;AN=56;BaseQRankSum=-7.244;DP=797;FS=16.541;HRun=0;HaplotypeScore=199.6426;InbreedingCoeff=-0.5243;MQ=55.14;MQ0=6;MQRankSum=0.134;QD=7.53;ReadPosRankSum=-2.758;VQSLOD=2.4496;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:53,0:52:31:137,0,31	1/1:8,1:9:6.97:56,7,0	0/0:25,0:16:13.77:0,14,252	0/0:21,0:15:17.42:0,17,277	0/1:39,1:40:99:237,0,126	0/1:25,2:27:29.42:279,0,29	0/1:41,0:39:11.79:378,0,12	0/1:32,0:31:12.64:13,0,377	0/1:26,3:28:93.84:251,0,94	0/1:30,2:31:17.51:357,0,18	0/1:9,2:11:5.02:103,0,5	0/1:35,1:36:99:293,0,127	0/1:29,4:32:62.35:364,0,62	0/1:35,1:36:33.99:358,0,34	0/1:25,5:30:23.77:433,0,24	0/1:15,2:16:46.01:117,0,46	0/0:45,0:45:29.11:0,29,294	0/1:19,0:19:0.55:1,0,83	0/0:18,0:18:28.08:0,28,196	0/1:24,0:24:26.50:40,0,26	0/0:36,0:36:5.70:0,6,85	0/1:23,0:23:40.08:99,0,40	0/1:15,1:16:35.21:153,0,35	0/1:41,3:43:39.70:359,0,40	0/1:24,5:26:78.88:208,0,79	0/1:33,1:33:83.06:215,0,83	1/1:19,4:22:1.49:340,1,0	0/1:13,1:14:56.93:122,0,57
chr10	24702837	.	G	GA	2259.71	PASS	AB=0.529;AC=11;AF=0.196;AN=56;BaseQRankSum=-4.363;DP=466;FS=1.516;HRun=9;HaplotypeScore=107.8757;InbreedingCoeff=0.8621;MQ=78.05;MQ0=1;MQRankSum=-5.855;QD=23.54;ReadPosRankSum=-2.361;VQSLOD=2.4887;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:35.93:0,36,303	0/0:11,0:11:32.99:0,33,286	0/0:18,0:19:35.65:0,36,292	0/0:16,0:15:31.78:0,32,255	0/0:28,0:28:71.96:0,72,620	0/0:21,0:20:50.97:0,51,442	0/0:13,0:13:38.99:0,39,339	1/1:8,10:18:6.87:279,7,0	0/0:13,0:13:32.98:0,33,285	0/0:15,0:15:38.99:0,39,339	0/0:14,0:14:38.99:0,39,338	0/0:6,0:6:18:0,18,156	0/0:22,0:22:59.99:0,60,521	0/0:18,0:18:50.75:0,51,423	0/0:13,0:13:38.99:0,39,338	0/0:18,0:18:47.98:0,48,416	1/1:5,14:19:54.12:583,54,0	1/1:4,11:15:36.10:398,36,0	1/1:2,13:15:39.11:431,39,0	1/1:5,14:20:50.95:534,51,0	0/1:1,8:9:1.99:208,0,2	0/0:13,0:13:32.98:0,33,286	0/0:15,1:16:2.83:0,3,253	0/0:19,1:20:8.81:0,9,305	0/0:15,0:14:32.97:0,33,286	0/0:29,0:29:74.95:0,75,648	0/0:26,0:26:55.99:0,56,474	0/0:6,0:6:18:0,18,156
chr10	24702863	.	GA	G	14068.79	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=2.875;DP=423;FS=0.741;HRun=2;HaplotypeScore=102.4649;InbreedingCoeff=0.9626;MQ=79.21;MQ0=0;MQRankSum=-8.361;QD=35.89;ReadPosRankSum=3.807;VQSLOD=4.9442;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,12:15:39.04:465,39,0	1/1:0,11:11:33.11:428,33,0	0/0:15,0:15:42.12:0,42,591	0/0:16,0:16:38.59:0,39,494	1/1:4,29:33:87.24:1077,87,0	1/1:1,20:20:60.19:769,60,0	1/1:1,11:12:36.12:463,36,0	1/1:1,16:17:48.16:623,48,0	1/1:1,7:8:24.08:311,24,0	1/1:1,12:13:39.12:491,39,0	1/1:2,19:21:63.12:789,63,0	1/1:0,6:6:18.06:233,18,0	1/1:2,14:16:45.15:582,45,0	1/1:1,19:20:57.18:731,57,0	1/1:0,7:7:21.07:266,21,0	1/1:1,14:15:45.15:582,45,0	1/1:0,12:12:33.11:426,33,0	1/1:2,11:13:36.98:452,37,0	1/1:1,12:13:36.12:466,36,0	1/1:1,14:15:42.14:542,42,0	1/1:0,5:5:9.03:116,9,0	1/1:3,13:16:45.08:556,45,0	1/1:2,11:13:36.12:462,36,0	1/1:0,13:13:30.10:389,30,0	1/1:1,16:16:48.09:597,48,0	1/1:1,27:28:84.23:1065,84,0	1/1:2,21:23:69.13:844,69,0	1/1:0,9:9:27.09:346,27,0
chr10	24702902	.	TCCC	T	8015.75	PASS	AC=40;AF=0.741;AN=54;BaseQRankSum=4.280;DP=379;FS=5.871;HRun=13;HaplotypeScore=145.9264;InbreedingCoeff=0.8906;MQ=67.22;MQ0=3;MQRankSum=-7.188;QD=28.22;ReadPosRankSum=5.324;VQSLOD=2.8360;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,14:18:44.98:505,45,0	1/1:1,9:10:27.08:328,27,0	0/0:13,0:7:3.68:0,4,15	0/0:20,0:16:32.85:0,33,354	1/1:4,31:35:78.22:946,78,0	1/1:3,12:15:32.92:401,33,0	1/1:2,9:11:24.07:292,24,0	0/0:8,0:8:0:0,0,0	1/1:3,5:8:14.90:182,15,0	1/1:4,10:14:29.27:363,29,0	1/1:1,16:17:42.09:510,42,0	1/1:0,5:5:15.05:179,15,0	1/1:2,11:13:30.08:365,30,0	1/1:3,18:21:50.90:566,51,0	1/1:0,6:6:18.06:219,18,0	1/1:5,9:14:26.93:328,27,0	0/0:10,0:13:28.16:0,28,262	0/0:8,0:10:17.49:0,17,163	0/0:13,0:15:5.48:0,5,29	0/0:12,0:13:14.59:0,15,139	./.	1/1:1,11:12:32.99:392,33,0	1/1:4,9:13:27:311,27,0	1/1:0,5:5:12.04:146,12,0	1/1:3,12:14:32.81:401,33,0	1/1:4,19:23:60.08:708,60,0	1/1:5,14:20:44.96:546,45,0	1/1:0,9:9:27.08:328,27,0
chr10	24703616	.	GGT	G	1281.78	PASS	AB=0.992;AC=25;AF=0.446;AN=56;BaseQRankSum=2.137;DP=659;FS=0.000;HRun=0;HaplotypeScore=218.9589;InbreedingCoeff=-0.3464;MQ=55.67;MQ0=7;MQRankSum=1.011;QD=2.55;ReadPosRankSum=2.581;VQSLOD=2.5167;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:26:0.74:0,1,4	0/1:9,0:9:4.53:55,0,5	0/0:30,0:17:4.89:0,5,69	0/0:30,0:21:3.01:0,3,43	0/1:42,0:42:13.49:40,0,13	0/1:16,0:16:33.83:54,0,34	1/1:20,0:19:5.98:37,6,0	0/1:28,5:32:13.45:95,0,13	1/1:22,0:22:10.42:91,10,0	0/1:26,0:25:85.87:86,0,87	0/1:19,0:19:14.97:39,0,15	0/1:28,0:28:63.27:76,0,63	0/1:20,0:20:25.81:111,0,26	0/1:26,0:26:18.21:100,0,18	0/1:35,0:34:52.05:61,0,52	0/1:22,0:22:8.12:79,0,8	0/1:11,0:11:1.03:1,0,8	0/0:10,0:10:8.91:0,9,62	0/0:23,0:23:5:0,5,36	0/0:17,0:16:2.04:0,2,6	0/0:19,0:19:3:0,3,26	0/1:28,0:28:9.03:69,0,9	1/1:27,0:27:1.24:3,1,0	1/1:22,0:21:2.92:18,3,0	0/1:29,0:29:27.77:28,0,57	0/1:32,0:32:61.06:165,0,61	0/1:23,0:23:56.59:119,0,57	0/1:12,0:12:27.92:104,0,28
chr10	24703644	.	TGTGC	T	1774.45	PASS	AB=0.980;AC=39;AF=0.696;AN=56;BaseQRankSum=5.170;DP=718;FS=8.035;HRun=0;HaplotypeScore=297.4485;InbreedingCoeff=0.1008;MQ=36.72;MQ0=11;MQRankSum=-1.910;QD=3.10;ReadPosRankSum=1.334;VQSLOD=0.8809;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:28:1.07:0,1,20	1/1:13,0:12:5.16:46,5,0	0/0:50,0:14:22.86:0,23,220	0/0:46,0:14:10.30:0,10,120	0/1:35,2:38:11.54:51,0,12	1/1:22,1:23:1.36:10,1,0	0/1:21,1:21:1.67:24,0,2	0/1:28,0:27:63.33:63,0,120	0/1:27,1:28:12.26:73,0,12	1/1:30,0:29:40.98:376,41,0	0/0:17,3:20:1.49:0,1,4	0/1:32,0:32:50.96:80,0,51	1/1:21,0:21:19.54:107,20,0	1/1:27,0:28:11.61:80,12,0	1/1:40,1:40:0.70:11,1,0	1/1:25,1:26:8.77:43,9,0	1/1:14,0:14:10.20:94,10,0	0/1:11,0:11:18.51:38,0,19	1/1:14,0:14:8.59:159,9,0	0/1:15,0:14:1.51:7,0,2	0/1:22,0:22:16.57:21,0,17	1/1:34,0:33:0.14:2,0,0	1/1:20,3:23:3.01:49,3,0	0/1:18,1:19:0.34:0,0,1	1/1:27,0:27:1.89:10,2,0	1/1:26,3:29:29.44:383,29,0	1/1:19,2:21:2.73:129,3,0	1/1:13,0:13:7.88:64,8,0
chr10	24703646	.	TGC	T	4632.46	PASS	AB=0.851;AC=46;AF=0.821;AN=56;BaseQRankSum=3.196;DP=713;FS=3.011;HRun=0;HaplotypeScore=275.1845;InbreedingCoeff=0.1948;MQ=36.20;MQ0=13;MQRankSum=1.592;QD=7.61;ReadPosRankSum=1.668;VQSLOD=3.9250;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:28:3.24:69,3,0	1/1:8,5:12:5.62:131,6,0	0/0:53,0:16:28.74:0,29,272	0/0:51,0:15:12.55:0,13,171	1/1:24,12:36:12.44:134,12,0	0/1:15,7:23:18.44:135,0,18	1/1:16,5:20:14.41:123,14,0	0/1:28,0:27:61.42:98,0,61	1/1:18,10:28:24.76:252,25,0	1/1:24,6:29:43.64:536,44,0	1/1:14,6:20:6.01:88,6,0	1/1:21,11:32:4.72:239,5,0	1/1:11,9:20:12.52:245,13,0	1/1:15,13:28:9.53:246,10,0	1/1:26,14:39:17.93:223,18,0	1/1:16,8:24:17.76:217,18,0	1/1:14,0:14:17.14:122,17,0	0/1:10,1:11:0.45:62,0,0	1/1:14,0:14:30.96:195,31,0	0/1:15,0:14:1.40:7,0,1	1/1:21,0:21:3.45:24,3,0	1/1:21,12:32:12.04:183,12,0	1/1:16,6:22:2.88:15,3,0	1/1:12,6:18:2.70:42,3,0	0/1:16,10:26:15.54:138,0,16	1/1:19,9:28:27.69:585,28,0	0/1:13,8:21:11.49:294,0,11	1/1:7,6:13:20.87:229,21,0
chr10	24703648	.	C	CGTGTAT	5287.39	PASS	AB=0.975;AC=38;AF=0.679;AN=56;BaseQRankSum=2.772;DP=742;FS=1.304;HRun=0;HaplotypeScore=334.0957;InbreedingCoeff=0.1921;MQ=35.37;MQ0=13;MQRankSum=-1.016;QD=9.44;ReadPosRankSum=2.390;VQSLOD=2.9613;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:27:2.59:6,0,3	1/1:13,2:14:6.24:73,6,0	0/0:52,0:14:35.85:0,36,617	0/0:52,0:16:41.66:0,42,560	1/1:36,5:41:2.94:60,3,0	0/0:26,2:28:3.04:0,3,20	1/1:20,0:20:6.13:122,6,0	0/1:29,0:28:99:128,0,195	0/1:27,2:29:8.14:169,0,8	1/1:26,2:27:62.20:1224,62,0	0/0:19,1:20:2.12:0,2,5	0/1:31,3:34:29.43:248,0,29	1/1:17,3:20:24.94:439,25,0	1/1:29,1:31:15.56:272,16,0	1/1:43,2:44:3.67:45,4,0	1/1:20,6:26:14.70:224,15,0	1/1:14,0:14:1.90:164,2,0	0/1:11,0:11:29.67:99,0,30	0/1:13,0:13:24.84:209,0,25	1/1:16,0:15:3.35:31,3,0	0/1:20,0:20:0.65:23,0,1	1/1:31,2:32:1.78:23,2,0	1/1:19,2:22:3.01:49,3,0	0/1:17,1:18:0.41:0,0,1	0/0:26,1:27:1.36:0,1,4	1/1:27,3:30:57.61:1064,58,0	1/1:22,2:24:18.03:505,18,0	1/1:12,0:12:11.14:110,11,0
chr10	24703649	.	G	GTGTA	2996.32	PASS	AB=0.973;AC=29;AF=0.518;AN=56;BaseQRankSum=2.041;DP=769;FS=6.526;HRun=0;HaplotypeScore=342.3454;InbreedingCoeff=-0.0034;MQ=35.59;MQ0=13;MQRankSum=-2.431;QD=6.04;ReadPosRankSum=0.823;VQSLOD=1.1798;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:26:1.76:12,2,0	0/1:15,0:14:4.50:4,0,15	0/0:52,0:14:35.88:0,36,556	0/0:55,0:17:37.11:0,37,547	0/1:41,0:41:25.84:26,0,39	0/0:28,0:28:2.29:0,2,8	1/1:21,0:20:1.31:40,1,0	0/1:39,0:38:99:808,0,182	0/1:28,0:28:31.76:46,0,32	1/1:28,0:27:15.65:300,16,0	0/0:21,0:21:2.80:0,3,7	0/1:34,0:34:56.04:56,0,67	0/1:21,0:21:14.80:84,0,15	1/1:31,0:31:8.69:123,9,0	0/0:44,0:43:0.36:0,0,3	1/1:26,0:26:5.37:18,5,0	0/1:15,0:15:4.61:243,0,5	0/1:8,3:12:22.34:126,0,22	1/1:8,10:21:4.12:621,4,0	1/1:6,10:17:5.53:72,6,0	1/1:22,0:22:2.94:46,3,0	0/0:34,0:33:2.96:0,3,27	1/1:22,0:22:2.99:24,3,0	0/1:18,1:19:0:0,0,0	0/0:26,0:26:3.75:0,4,44	0/1:31,0:31:46.03:355,0,46	0/1:25,0:25:99:144,0,106	0/0:12,0:12:4.72:0,5,24
chr10	24703650	.	TGC	T	1822.49	PASS	AB=1.000;AC=46;AF=0.821;AN=56;BaseQRankSum=5.531;DP=762;FS=3.518;HRun=0;HaplotypeScore=325.9139;InbreedingCoeff=0.2625;MQ=36.49;MQ0=13;MQRankSum=0.038;QD=2.92;ReadPosRankSum=1.595;VQSLOD=1.3125;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:25:0.38:0,0,7	1/1:13,1:14:4.91:47,5,0	0/0:53,1:16:41.80:0,42,609	0/0:58,0:18:42.17:0,42,647	1/1:41,0:41:5.81:30,6,0	1/1:28,0:28:6.12:22,6,0	0/1:21,0:20:7.93:20,0,8	0/1:40,0:39:47.22:47,0,477	1/1:28,0:28:18.86:103,19,0	1/1:25,2:26:29.57:295,30,0	1/1:21,0:21:0.29:3,0,0	0/1:33,0:33:47.04:71,0,47	1/1:21,0:21:20.82:107,21,0	1/1:30,0:30:12.81:114,13,0	1/1:42,0:41:0.02:7,0,0	1/1:26,0:26:10.58:72,11,0	1/1:15,0:15:17.17:119,17,0	1/1:12,0:12:11.43:88,11,0	1/1:20,0:20:37.43:272,37,0	1/1:18,0:17:1.53:22,2,0	1/1:21,0:21:4.39:26,4,0	1/1:31,2:32:0.73:9,1,0	1/1:22,0:22:2.22:7,2,0	1/1:19,0:19:0.86:3,1,0	1/1:25,0:25:1.13:22,1,0	1/1:30,0:30:43.28:294,43,0	0/1:25,0:25:1.47:83,0,1	1/1:11,0:11:15.81:82,16,0
chr10	24703655	.	GTA	G	1808.52	PASS	AB=0.991;AC=35;AF=0.625;AN=56;BaseQRankSum=6.120;DP=786;FS=0.000;HRun=0;HaplotypeScore=334.3752;InbreedingCoeff=-0.1039;MQ=37.03;MQ0=14;MQRankSum=-0.317;QD=2.91;ReadPosRankSum=2.500;VQSLOD=1.6966;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:21:0.06:0,0,7	0/1:15,0:14:13.75:14,0,37	0/0:56,0:16:42.09:0,42,755	0/0:64,0:20:24.64:0,25,875	0/1:43,0:43:18.68:20,0,19	0/1:27,2:29:39.81:40,0,57	1/1:23,1:23:10.43:67,10,0	0/1:42,0:41:99:123,0,157	1/1:27,1:28:4.92:81,5,0	1/1:29,1:29:34.51:307,35,0	0/1:25,0:25:1.11:80,0,1	0/1:32,0:32:40.28:61,0,40	1/1:20,0:20:18.38:97,18,0	0/1:28,0:28:32.36:45,0,32	0/1:42,0:41:5.33:5,0,13	1/1:28,0:28:3.60:92,4,0	1/1:15,0:16:16.43:112,16,0	1/1:12,0:12:10.11:87,10,0	1/1:22,0:22:32.64:276,33,0	1/1:19,0:18:1.66:21,2,0	1/1:23,0:22:7.85:49,8,0	0/1:32,2:33:10.65:11,0,45	0/0:22,0:22:0.47:0,0,1	1/1:19,0:19:3.77:10,4,0	0/1:24,0:24:40.51:60,0,41	0/1:29,0:29:14.45:154,0,14	0/1:28,0:28:18.86:110,0,19	0/1:10,0:10:25.24:47,0,25
chr10	24703657	.	A	ATGTGTGTG	10656.36	PASS	AB=1.000;AC=48;AF=0.889;AN=54;BaseQRankSum=3.754;DP=801;FS=2.307;HRun=0;HaplotypeScore=358.2938;InbreedingCoeff=0.5381;MQ=37.14;MQ0=17;MQRankSum=1.504;QD=16.27;ReadPosRankSum=0.531;VQSLOD=2.5527;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,19:28:3.06:9,3,0	1/1:15,0:14:11.83:132,12,0	0/0:56,0:16:41.17:0,41,911	0/0:67,0:20:53.59:0,54,980	1/1:44,0:44:12.50:106,13,0	1/1:29,0:29:11.63:155,12,0	1/1:25,0:24:15.76:137,16,0	1/1:43,0:42:99:2454,108,0	1/1:27,0:27:29.48:259,29,0	1/1:31,0:30:81.14:1067,81,0	1/1:26,0:26:21.02:267,21,0	0/1:34,0:34:8.14:244,0,8	1/1:21,0:21:26.96:434,27,0	1/1:27,0:29:21.07:426,21,0	1/1:41,0:41:6.02:85,6,0	1/1:27,0:28:27.02:330,27,0	1/1:14,0:16:16.58:476,17,0	0/1:12,0:12:3.46:240,0,3	1/1:24,0:22:62.49:1265,62,0	1/1:17,0:16:11.55:203,12,0	1/1:20,0:23:8.12:213,8,0	1/1:32,0:32:11.99:147,12,0	./.	1/1:17,0:18:9:97,9,0	1/1:23,0:24:11.84:113,12,0	1/1:27,0:27:71.95:908,72,0	1/1:28,0:29:53.99:736,54,0	1/1:9,0:9:12.03:153,12,0
chr10	24703659	.	GTA	G	1520.64	PASS	AB=0.800;AC=21;AF=0.389;AN=54;BaseQRankSum=3.069;DP=805;FS=31.887;HRun=0;HaplotypeScore=338.6677;InbreedingCoeff=-0.3656;MQ=37.42;MQ0=17;MQRankSum=-3.217;QD=2.96;ReadPosRankSum=4.857;VQSLOD=1.3211;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:28:5.97:0,6,55	1/1:10,4:14:5.95:52,6,0	0/0:59,1:18:48.14:0,48,820	0/0:67,0:20:43.44:0,43,809	0/1:31,10:44:45.46:57,0,45	0/0:23,4:27:10.89:0,11,99	0/1:16,7:23:15.76:71,0,16	0/1:26,0:42:99:127,0,672	0/1:20,7:27:47.59:99,0,48	0/1:24,5:31:99:226,0,311	0/1:19,6:26:2.31:2,0,165	0/1:28,8:36:63.98:64,0,117	0/1:13,9:22:95.71:154,0,96	0/1:21,5:27:73.90:107,0,74	1/1:29,11:41:5.90:61,6,0	0/1:22,6:28:89.58:90,0,123	0/1:13,0:15:5.47:5,0,112	0/1:11,0:11:17.48:17,0,77	0/0:22,0:22:4.99:0,5,378	0/0:18,0:17:16.30:0,16,171	0/0:24,0:24:13.10:0,13,149	0/1:21,10:32:16.39:40,0,16	./.	0/0:17,3:20:9.50:0,10,126	0/1:19,6:25:35.39:35,0,79	0/1:23,4:28:99:256,0,231	0/1:24,5:30:99:175,0,271	0/1:4,3:8:37.88:38,0,71
chr10	24703675	.	CTG	C	4006.46	PASS	AB=0.639;AC=35;AF=0.625;AN=56;BaseQRankSum=4.645;DP=843;FS=2.845;HRun=0;HaplotypeScore=320.7364;InbreedingCoeff=0.6785;MQ=41.40;MQ0=15;MQRankSum=2.198;QD=7.35;ReadPosRankSum=4.925;VQSLOD=2.8682;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:10.95:0,11,151	0/1:6,7:12:0:0,0,0	0/0:50,0:18:25.32:0,25,382	0/0:64,0:21:45.06:0,45,600	1/1:17,28:45:12.43:157,12,0	1/1:6,22:28:0.68:142,1,0	0/1:9,16:25:7.41:34,0,7	0/0:46,0:45:99:0,112,1584	1/1:9,15:24:8.80:116,9,0	1/1:13,22:35:33.44:838,33,0	1/1:7,20:27:18.05:234,18,0	1/1:12,26:38:12.11:225,12,0	0/1:12,13:25:5.89:151,0,6	1/1:9,20:29:7.50:225,7,0	1/1:15,31:45:2.91:39,3,0	1/1:8,25:33:7.32:219,7,0	0/0:16,0:16:25.66:0,26,402	0/0:13,0:13:26.02:0,26,334	0/0:30,0:28:69.54:0,70,1017	0/0:18,0:17:16.83:0,17,252	0/0:30,0:27:35.82:0,36,594	1/1:16,15:31:3:39,3,0	1/1:5,15:20:3.01:39,3,0	1/1:12,20:31:9.02:117,9,0	1/1:8,19:27:11.40:125,11,0	1/1:5,18:24:35.41:611,35,0	1/1:6,29:35:35.65:540,36,0	1/1:4,4:8:11.88:155,12,0
chr10	24703685	.	GTA	G	1403.30	PASS	AB=0.995;AC=20;AF=0.357;AN=56;BaseQRankSum=11.096;DP=843;FS=0.899;HRun=0;HaplotypeScore=307.5094;InbreedingCoeff=-0.0893;MQ=42.75;MQ0=14;MQRankSum=-2.100;QD=2.78;ReadPosRankSum=8.099;VQSLOD=1.3195;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:14.56:0,15,209	0/0:13,0:12:5.65:0,6,48	0/0:43,0:16:43.35:0,43,564	0/0:62,0:22:25.56:0,26,635	0/1:43,0:43:35.88:36,0,74	0/1:30,0:30:30.54:41,0,31	0/1:26,0:26:2.59:3,0,63	0/0:48,0:47:99:0,111,1688	0/1:24,0:24:29.19:67,0,29	0/1:38,0:38:22.44:334,0,22	0/1:30,0:30:25.26:63,0,25	1/1:33,1:34:20.30:122,20,0	0/1:25,1:26:46.88:89,0,47	0/1:30,0:30:18.57:92,0,19	0/1:41,0:40:8.48:8,0,19	0/1:35,0:35:45.88:103,0,46	0/0:16,0:16:26.44:0,26,476	0/0:15,0:15:13.51:0,14,405	0/0:30,0:28:74.71:0,75,1193	0/0:18,0:17:22.82:0,23,344	0/0:30,0:27:45.11:0,45,767	0/0:30,1:31:0.59:0,1,81	0/1:21,0:21:8.18:8,0,18	1/1:31,0:30:8.58:45,9,0	0/1:27,1:29:23.58:24,0,57	0/1:24,0:24:15.52:222,0,16	1/1:33,0:33:43.08:252,43,0	0/1:9,0:8:8.11:66,0,8
chr10	24704111	.	TCAAACACACACACA	T	5105.63	PASS	AB=0.981;AC=30;AF=0.536;AN=56;BaseQRankSum=6.015;DP=507;FS=3.800;HRun=0;HaplotypeScore=199.8402;InbreedingCoeff=0.6702;MQ=60.95;MQ0=6;MQRankSum=-4.149;QD=16.52;ReadPosRankSum=2.359;VQSLOD=3.9542;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:65.93:0,66,2889	1/1:3,1:4:6.02:174,6,0	0/0:29,0:16:16.89:0,17,164	0/1:32,0:20:0.52:1,0,314	0/0:14,0:14:2.37:0,2,8	1/1:22,0:22:17.03:567,17,0	0/1:18,0:18:99:298,0,125	0/0:30,0:30:63.12:0,63,994	1/1:13,0:13:9.03:150,9,0	1/1:14,1:15:21.72:285,22,0	1/1:20,0:20:6.65:112,7,0	0/0:12,0:12:5.49:0,5,45	1/1:21,1:22:51.02:773,51,0	1/1:19,1:20:12.04:321,12,0	1/1:19,1:20:20.65:525,21,0	1/1:14,1:15:18.06:410,18,0	0/0:21,0:21:35.94:0,36,802	0/0:14,0:14:33.03:0,33,810	0/0:18,0:18:39.10:0,39,1249	0/0:13,0:13:27.04:0,27,943	0/0:12,0:12:27.01:0,27,558	1/1:15,0:15:9.03:187,9,0	1/1:19,0:19:7.29:179,7,0	0/1:11,1:12:0:0,0,0	0/1:16,0:16:12.38:155,0,12	1/1:15,0:15:29.68:316,30,0	1/1:30,1:30:26.09:652,26,0	0/0:1,0:1:2.37:0,2,8
chr10	24704116	.	CACACACACACAA	C	7788.70	PASS	AB=0.856;AC=33;AF=0.589;AN=56;BaseQRankSum=4.538;DP=525;FS=3.523;HRun=0;HaplotypeScore=174.5005;InbreedingCoeff=0.6035;MQ=60.35;MQ0=9;MQRankSum=-4.146;QD=23.75;ReadPosRankSum=3.833;VQSLOD=4.1351;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:61.84:0,62,2778	1/1:2,3:5:6.01:185,6,0	0/0:29,0:16:16.89:0,17,164	0/1:32,0:20:0.57:1,0,229	1/1:2,14:16:9.03:108,9,0	1/1:14,6:20:47.51:955,48,0	0/1:15,2:16:78.22:376,0,78	0/0:32,0:31:78.16:0,78,1359	1/1:2,12:14:9.03:287,9,0	1/1:4,11:15:30:418,30,0	1/1:6,14:20:15.05:308,15,0	0/0:13,0:13:2.66:0,3,9	1/1:15,6:21:49.88:1106,50,0	1/1:3,14:17:12.04:345,12,0	1/1:3,17:20:20.75:705,21,0	1/1:3,12:15:18.06:603,18,0	0/0:22,0:22:36.38:0,36,687	0/0:19,0:19:32.99:0,33,693	0/0:19,0:19:45.05:0,45,1162	0/0:15,0:15:35.50:0,36,866	0/0:13,0:13:27.01:0,27,509	1/1:2,14:16:9.03:323,9,0	1/1:4,16:20:7.29:315,7,0	0/1:10,3:13:11.95:18,0,12	0/1:4,12:16:17.37:292,0,17	1/1:1,15:15:35.88:514,36,0	1/1:9,24:33:25.76:923,26,0	0/1:2,0:2:6.97:7,0,61
chr10	24704118	.	CACACACACAA	C	5647.68	PASS	AB=0.924;AC=34;AF=0.607;AN=56;BaseQRankSum=5.616;DP=517;FS=2.129;HRun=0;HaplotypeScore=164.5466;InbreedingCoeff=0.5752;MQ=59.24;MQ0=9;MQRankSum=-3.791;QD=17.17;ReadPosRankSum=3.130;VQSLOD=3.9948;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:46.14:0,46,2377	1/1:5,0:5:6.01:138,6,0	0/0:29,0:15:16.89:0,17,164	0/1:31,0:19:0.62:1,0,205	1/1:15,0:15:8.70:49,9,0	1/1:20,0:20:50.90:723,51,0	0/1:17,0:16:99:290,0,100	0/0:32,0:31:81.12:0,81,1299	1/1:13,0:13:9.03:187,9,0	1/1:14,0:14:29.77:320,30,0	1/1:19,0:19:14.72:184,15,0	0/1:2,11:13:2.08:30,0,2	1/1:19,2:21:22.60:840,23,0	1/1:16,0:16:12.04:250,12,0	1/1:20,0:20:20.86:511,21,0	1/1:14,0:14:18.06:422,18,0	0/0:23,0:23:39.28:0,39,613	0/0:21,0:21:29.67:0,30,582	0/0:19,0:19:48.04:0,48,1081	0/0:15,0:15:31.45:0,31,747	0/0:14,0:14:26.68:0,27,458	1/1:15,0:15:9.03:223,9,0	1/1:19,0:19:7.34:215,7,0	0/1:12,0:12:11.95:18,0,12	0/1:15,0:15:40.10:192,0,40	1/1:16,0:15:31.75:387,32,0	1/1:32,0:31:26.10:662,26,0	0/1:2,0:2:6.97:7,0,37
chr10	24704128	.	A	AACACAC	2203.17	PASS	AB=1.000;AC=30;AF=0.577;AN=52;BaseQRankSum=-4.464;DP=546;FS=4.816;HRun=0;HaplotypeScore=167.0145;InbreedingCoeff=0.1751;MQ=52.90;MQ0=10;MQRankSum=-0.665;QD=6.22;ReadPosRankSum=-1.494;VQSLOD=2.4575;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:37:31.21:0,31,679	0/0:4,0:4:5.99:0,6,69	./.	./.	1/1:15,0:15:8.70:48,9,0	0/1:23,0:23:66.81:67,0,207	1/1:18,0:18:9.95:70,10,0	0/0:38,0:37:13.73:0,14,336	0/1:14,0:14:1.26:1,0,60	0/1:15,0:15:73.30:77,0,73	0/1:16,0:16:15.53:20,0,16	1/1:12,0:12:1.86:6,2,0	0/1:27,0:27:99:115,0,221	0/1:17,0:17:6.65:7,0,74	0/1:24,0:24:10.05:10,0,204	0/0:14,0:14:21.06:0,21,267	1/1:14,1:25:12.04:211,12,0	1/1:10,8:22:6.50:196,7,0	1/1:11,8:21:30.06:679,30,0	1/1:2,11:18:27.55:584,28,0	1/1:8,4:18:6.49:129,6,0	0/0:17,0:17:11.99:0,12,131	0/1:18,0:18:14.06:14,0,53	1/1:15,0:16:3.41:19,3,0	0/1:14,0:14:2.54:3,0,98	0/1:17,0:16:25.21:62,0,25	0/0:27,0:26:17.13:0,17,269	1/1:3,0:3:5.98:55,6,0
chr10	24704693	.	GATGAGGTCTCAGA	G	27411.89	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=15.581;DP=514;FS=1.676;HRun=0;HaplotypeScore=215.9464;InbreedingCoeff=0.9772;MQ=66.83;MQ0=0;MQRankSum=-16.115;QD=81.58;ReadPosRankSum=6.548;VQSLOD=4.3973;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:26:75.24:0,75,4547	1/1:0,7:7:18.06:726,18,0	0/0:18,0:18:45.15:0,45,2027	0/0:18,0:18:42.12:0,42,2170	1/1:6,23:29:63.22:2479,63,0	1/1:4,22:26:60.21:2419,60,0	1/1:7,5:12:15.05:605,15,0	0/0:26,0:26:72.25:0,72,4265	1/1:2,15:17:42.14:1693,42,0	1/1:6,14:20:42.14:1647,42,0	1/1:6,9:15:21.07:846,21,0	1/1:2,11:13:27.09:1088,27,0	1/1:2,11:13:24.08:967,24,0	1/1:4,10:14:24.08:948,24,0	1/1:7,24:31:63.22:2540,63,0	1/1:3,18:21:38.81:1572,39,0	0/0:16,0:16:48.16:0,48,2863	0/0:11,0:11:30.99:0,31,1661	0/0:13,0:13:39.13:0,39,2301	0/0:25,0:25:72.25:0,72,4332	0/0:24,0:23:72.25:0,72,4546	1/1:3,17:20:42.14:1693,42,0	1/1:5,20:25:45:1812,45,0	1/1:2,9:11:18.06:726,18,0	1/1:1,11:12:33.11:1330,33,0	1/1:2,17:19:51.18:2023,51,0	1/1:9,17:26:51.18:2056,51,0	1/1:0,5:5:6.02:242,6,0
chr10	24705960	.	GCACACA	G	1451.98	PASS	AB=0.793;AC=28;AF=0.667;AN=42;BaseQRankSum=5.027;DP=444;FS=9.251;HRun=0;HaplotypeScore=109.3101;InbreedingCoeff=0.3571;MQ=56.65;MQ0=14;MQRankSum=-0.333;QD=6.05;ReadPosRankSum=-0.834;VQSLOD=1.5716;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:20,8:28:2.69:57,3,0	1/1:3,1:4:3.01:60,3,0	./.	./.	1/1:12,8:19:3.01:60,3,0	./.	./.	0/0:24,0:24:0.89:0,1,2	0/1:13,2:14:3.39:54,0,3	1/1:10,7:17:13.94:264,14,0	./.	1/1:8,5:13:6.02:116,6,0	1/1:13,6:19:1.60:58,2,0	1/1:12,2:14:3.01:60,3,0	1/1:6,0:8:3.01:40,3,0	1/1:5,6:11:9.03:179,9,0	0/1:11,1:18:39.27:39,0,205	0/0:10,0:14:18.02:0,18,231	0/0:13,0:13:6:0,6,52	0/0:6,0:10:6.02:0,6,81	0/0:27,0:34:26.14:0,26,312	1/1:5,6:11:6.49:122,6,0	./.	1/1:11,10:21:6.02:117,6,0	1/1:13,8:22:9.03:162,9,0	1/1:12,5:17:0.17:195,0,0	./.	0/0:2,0:2:0.89:0,1,2
chr10	24706162	.	A	AT	7803	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-11.009;DP=417;FS=2.355;HRun=7;HaplotypeScore=37.0568;InbreedingCoeff=0.9543;MQ=71.29;MQ0=0;MQRankSum=-0.189;QD=30.60;ReadPosRankSum=3.431;VQSLOD=4.7554;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:62.89:0,63,592	1/1:0,5:5:15.05:181,15,0	0/0:8,0:8:15.02:0,15,143	0/0:4,0:4:6:0,6,57	1/1:4,29:33:87.22:1035,87,0	1/1:0,15:15:42.13:507,42,0	1/1:0,7:7:21.06:254,21,0	0/0:31,0:31:75.10:0,75,720	1/1:0,7:7:15.05:181,15,0	1/1:1,18:19:54.17:652,54,0	1/1:2,17:19:48.11:564,48,0	1/1:0,8:8:21.06:254,21,0	1/1:3,15:19:51.12:590,51,0	1/1:1,8:9:21.06:254,21,0	1/1:1,11:12:27.08:326,27,0	1/1:0,12:12:27.08:326,27,0	0/0:21,0:21:54.02:0,54,506	0/0:26,0:26:69.08:0,69,658	0/0:20,0:20:54.09:0,54,521	0/0:27,0:27:78.13:0,78,753	0/0:3,0:3:9.01:0,9,87	1/1:0,4:4:12.04:145,12,0	1/1:2,14:16:39.04:452,39,0	1/1:1,4:5:12.04:145,12,0	1/1:2,18:20:42.13:507,42,0	1/1:0,14:14:42.13:507,42,0	1/1:1,21:21:57.09:669,57,0	1/1:2,7:9:21.06:254,21,0
chr10	24706490	.	CTAG	C	5108.88	PASS	AB=0.886;AC=38;AF=0.760;AN=50;BaseQRankSum=-0.496;DP=512;FS=4.538;HRun=0;HaplotypeScore=92.4581;InbreedingCoeff=0.5844;MQ=67.94;MQ0=9;MQRankSum=0.252;QD=14.43;ReadPosRankSum=1.004;VQSLOD=3.8619;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	1/1:4,4:8:15.05:196,15,0	./.	./.	1/1:19,3:22:0.78:143,1,0	1/1:15,6:21:19.22:396,19,0	1/1:7,2:9:3.01:39,3,0	0/1:34,0:31:8.48:21,0,8	1/1:10,2:12:12.04:157,12,0	1/1:15,6:20:33.10:410,33,0	1/1:19,2:21:29.87:350,30,0	1/1:13,9:22:36.12:471,36,0	1/1:8,10:19:30.10:388,30,0	1/1:13,7:20:33.10:421,33,0	1/1:22,9:31:5.80:599,6,0	1/1:9,4:13:21.03:248,21,0	0/0:10,0:15:6.02:0,6,74	0/0:12,0:19:12:0,12,138	0/0:15,0:15:6.02:0,6,115	0/0:10,0:24:8.46:0,8,103	0/0:15,0:24:15.05:0,15,224	1/1:6,2:8:12.04:157,12,0	1/1:12,4:15:14.64:166,15,0	0/1:12,5:17:21.93:154,0,22	1/1:6,6:12:6.02:78,6,0	1/1:11,1:12:14.94:173,15,0	1/1:18,6:25:33.07:407,33,0	1/1:11,0:11:14.61:133,15,0
chr10	24706560	.	C	CAGCAGCAAT	10560.83	PASS	AC=38;AF=0.704;AN=54;BaseQRankSum=3.471;DP=558;FS=0.589;HRun=0;HaplotypeScore=151.6582;InbreedingCoeff=0.8462;MQ=55.34;MQ0=22;MQRankSum=-9.513;QD=30.70;ReadPosRankSum=-0.019;VQSLOD=4.2287;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	1/1:3,5:8:6.02:259,6,0	0/0:27,0:9:18:0,18,297	0/0:32,0:15:33.10:0,33,653	1/1:9,11:21:12.83:316,13,0	1/1:8,8:18:8.92:384,9,0	1/1:4,4:8:6.02:246,6,0	0/0:46,0:45:69.22:0,69,1558	1/1:4,9:15:18.06:750,18,0	1/1:10,6:18:30.09:695,30,0	1/1:6,8:17:11.93:140,12,0	1/1:7,9:19:12.03:401,12,0	1/1:11,16:28:18.06:741,18,0	1/1:10,11:22:27.09:1081,27,0	1/1:13,14:30:24.07:891,24,0	1/1:6,7:14:9.03:373,9,0	0/0:19,0:19:39.13:0,39,921	0/0:16,0:15:33.09:0,33,821	0/0:9,0:8:15.05:0,15,421	0/0:28,0:28:66.23:0,66,1699	0/0:30,0:27:42.14:0,42,1133	1/1:4,4:8:9.03:274,9,0	1/1:4,7:11:4.26:117,4,0	1/1:8,5:15:2.90:124,3,0	1/1:5,14:23:15.05:634,15,0	1/1:7,18:25:46.05:1207,46,0	1/1:10,23:35:39.13:1658,39,0	1/1:2,2:4:6.02:268,6,0
chr10	24707189	.	AAAG	A	18314.04	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=11.808;DP=690;FS=0.980;HRun=0;HaplotypeScore=115.9355;InbreedingCoeff=0.9996;MQ=83.16;MQ0=0;MQRankSum=-6.949;QD=41.34;ReadPosRankSum=4.676;VQSLOD=6.1536;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:37:99:0,108,2339	1/1:2,7:9:24.08:377,24,0	0/0:32,0:32:72.49:0,72,1356	0/0:28,0:28:54.07:0,54,1149	1/1:6,25:31:78.26:1192,78,0	1/1:4,21:25:69.24:1090,69,0	1/1:2,22:24:48.16:761,48,0	0/0:41,0:41:99:0,114,2424	1/1:3,20:23:66.22:1041,66,0	1/1:4,18:22:63.21:975,63,0	1/1:6,14:20:54.18:847,54,0	1/1:1,21:22:66.23:1047,66,0	1/1:6,26:32:81.23:1250,81,0	1/1:6,22:28:72.20:1102,72,0	1/1:3,21:24:66.22:1046,66,0	1/1:5,18:23:60.16:903,60,0	0/0:23,0:23:54.14:0,54,1116	0/0:13,0:13:30.07:0,30,611	0/0:17,0:17:45.15:0,45,891	0/0:23,0:23:57.20:0,57,1229	0/0:32,0:32:87.25:0,87,1763	1/1:1,19:20:54.18:829,54,0	1/1:3,19:22:60.20:950,60,0	1/1:5,13:18:42.14:663,42,0	1/1:2,22:24:69.19:1060,69,0	1/1:2,29:31:87.24:1304,87,0	1/1:6,19:25:66.22:1032,66,0	1/1:4,16:20:54.18:845,54,0
chr10	24707273	.	CT	C	15870.51	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=10.026;DP=574;FS=1.280;HRun=2;HaplotypeScore=65.9581;InbreedingCoeff=0.9910;MQ=63.80;MQ0=0;MQRankSum=-0.036;QD=34.96;ReadPosRankSum=5.409;VQSLOD=4.9789;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,102,1487	1/1:0,6:6:12.04:156,12,0	0/0:24,0:23:63.13:0,63,895	0/0:19,0:19:47.34:0,47,721	1/1:3,18:21:60.19:778,60,0	1/1:0,23:23:66.21:856,66,0	1/1:0,21:21:57.19:740,57,0	0/0:40,0:40:99:0,117,1736	1/1:2,19:21:57.16:724,57,0	1/1:3,28:31:84.26:1075,84,0	1/1:1,15:16:36.12:467,36,0	1/1:0,16:16:48.16:622,48,0	1/1:3,17:20:54.17:688,54,0	1/1:1,18:19:48.16:623,48,0	1/1:0,27:27:75.24:973,75,0	1/1:2,17:19:57.17:726,57,0	1/1:0,14:14:33.11:428,33,0	1/1:1,12:13:33.11:428,33,0	1/1:1,16:17:45.15:584,45,0	1/1:0,22:22:63.20:818,63,0	1/1:1,22:23:60.19:779,60,0	1/1:3,13:16:32.78:428,33,0	1/1:4,9:13:35.76:434,36,0	1/1:2,19:21:57.19:740,57,0	1/1:1,16:17:51.17:661,51,0	1/1:0,22:22:66.21:857,66,0	1/1:1,25:26:69.22:895,69,0	1/1:0,10:10:30.10:389,30,0
chr10	24708212	.	C	CT	5500.52	PASS	AB=0.684;AC=33;AF=0.589;AN=56;BaseQRankSum=-7.357;DP=720;FS=0.792;HRun=13;HaplotypeScore=94.5450;InbreedingCoeff=0.3532;MQ=71.43;MQ0=0;MQRankSum=-1.824;QD=10.81;ReadPosRankSum=1.730;VQSLOD=4.6004;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:49,2:54:47.89:0,48,598	0/1:3,8:13:2.32:133,0,2	0/0:21,0:19:0.84:0,1,97	0/0:11,1:11:7.04:0,7,29	1/1:10,22:33:45.18:476,45,0	0/1:8,11:20:5.29:229,0,5	0/1:5,15:21:3.35:290,0,3	0/0:5,0:24:33.81:0,34,97	0/1:7,11:18:12.68:168,0,13	1/1:4,24:29:59.25:564,59,0	1/1:4,17:22:23.76:189,24,0	1/1:6,25:31:36.93:336,37,0	1/1:11,17:30:25.74:236,26,0	1/1:6,22:28:30.51:279,31,0	1/1:6,11:17:27.03:251,27,0	1/1:10,16:26:18.41:305,18,0	0/0:32,1:34:46.16:0,46,312	0/1:21,1:22:11.82:12,0,187	0/0:33,1:34:34.03:0,34,369	0/1:27,3:31:18.69:19,0,121	0/0:23,1:28:15.79:0,16,222	1/1:4,8:13:4.17:163,4,0	0/1:7,21:29:7.97:342,0,8	0/1:15,20:35:81:327,0,81	1/1:5,16:23:22.17:322,22,0	1/1:12,14:26:41.11:345,41,0	1/1:10,20:28:45.05:418,45,0	0/1:6,6:12:5.56:97,0,6
chr10	24708259	.	CCTTGTGGTGT	C	449.04	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=0.707;DP=571;FS=0.000;HRun=0;HaplotypeScore=164.7271;InbreedingCoeff=0.9928;MQ=87.66;MQ0=0;MQRankSum=-3.690;QD=44.90;ReadPosRankSum=-2.384;VQSLOD=3.0027;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,117,5913	0/0:11,0:11:30.09:0,30,1278	0/0:18,0:18:54.17:0,54,2241	0/0:23,0:23:54.16:0,54,2249	0/0:29,0:29:81.28:0,81,4149	0/0:21,0:21:54.16:0,54,2558	0/0:24,0:24:63.07:0,63,2679	1/1:6,4:10:27.01:543,27,0	0/0:17,0:17:33.11:0,33,1748	0/0:25,0:25:63.22:0,63,3306	0/0:16,0:16:42.14:0,42,2167	0/0:17,0:17:36.12:0,36,1892	0/0:17,0:17:36.11:0,36,1764	0/0:21,0:21:48.16:0,48,2486	0/0:18,0:18:51.18:0,51,2656	0/0:19,0:19:45.15:0,45,2253	0/0:28,0:28:81.26:0,81,3939	0/0:18,0:18:54.19:0,54,2741	0/0:19,0:19:51.18:0,51,2527	0/0:19,0:19:54.19:0,54,2835	0/0:29,0:29:84.27:0,84,4125	0/0:16,0:16:45.15:0,45,2278	0/0:16,0:16:42.60:0,43,1966	0/0:32,0:32:78.27:0,78,4082	0/0:14,0:14:27.09:0,27,1315	0/0:20,0:20:51.16:0,51,2561	0/0:22,0:22:57.20:0,57,3018	0/0:8,0:8:20.99:0,21,852
chr10	24710430	.	T	TACAC	4198.49	PASS	AB=1.000;AC=20;AF=0.357;AN=56;BaseQRankSum=-12.079;DP=664;FS=44.482;HRun=0;HaplotypeScore=235.1249;InbreedingCoeff=0.5464;MQ=55.72;MQ0=12;MQRankSum=7.651;QD=12.10;ReadPosRankSum=0.630;VQSLOD=1.4103;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,13:28:23.80:473,24,0	0/0:12,0:12:22.62:0,23,253	0/0:40,0:18:2.99:0,3,35	0/1:52,0:25:24.94:25,0,221	0/0:26,0:26:19.74:0,20,210	0/1:20,0:22:3.49:3,0,317	0/0:13,0:13:6.90:0,7,72	1/1:40,0:39:59.93:589,60,0	0/0:17,0:18:16.44:0,16,348	0/1:18,0:18:0.68:1,0,240	0/1:20,0:20:32.82:33,0,251	0/0:12,0:12:21.06:0,21,252	0/0:24,0:24:8.19:0,8,403	0/0:21,0:21:13.70:0,14,360	0/0:23,0:23:27:0,27,320	0/0:30,0:31:48.61:0,49,533	1/1:9,13:24:24.08:582,24,0	1/1:16,2:20:16.33:500,16,0	1/1:8,14:23:45.45:666,45,0	1/1:9,20:35:6.61:956,7,0	1/1:6,13:21:15.04:364,15,0	0/1:23,0:24:1.85:2,0,379	0/0:16,0:16:20.48:0,20,225	0/1:17,0:17:4.01:4,0,131	0/0:26,0:26:40.91:0,41,456	0/0:23,0:23:20.98:0,21,237	0/0:23,0:23:26.98:0,27,461	0/0:9,0:9:5.99:0,6,67
chr10	24710476	.	C	CAA	6435.47	PASS	AB=1.000;AC=37;AF=0.661;AN=56;BaseQRankSum=-2.965;DP=719;FS=3.718;HRun=1;HaplotypeScore=221.8503;InbreedingCoeff=0.6335;MQ=45.90;MQ0=12;MQRankSum=3.524;QD=13.49;ReadPosRankSum=0.343;VQSLOD=1.7276;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:31:66.06:0,66,903	1/1:15,0:15:2.08:143,2,0	0/0:41,0:22:46.41:0,46,689	0/0:53,0:19:41.23:0,41,524	1/1:29,0:29:21.17:365,21,0	1/1:24,0:24:8.83:336,9,0	1/1:7,0:7:5.73:97,6,0	0/1:29,0:29:99:237,0,219	0/1:24,0:24:9.13:232,0,9	1/1:34,0:35:61.33:694,61,0	1/1:33,1:33:36.48:506,36,0	1/1:17,0:17:5.88:207,6,0	1/1:25,0:25:6.70:225,7,0	1/1:27,0:27:11.86:342,12,0	1/1:25,0:25:14.95:348,15,0	1/1:27,0:27:8.88:325,9,0	0/0:20,0:20:53.67:0,54,636	0/0:15,0:15:35.87:0,36,429	0/0:21,0:20:54.06:0,54,759	0/0:38,0:38:93.28:0,93,1337	0/0:22,0:21:38.82:0,39,574	0/1:24,0:24:15.35:230,0,15	1/1:17,0:17:21.93:310,22,0	1/1:14,1:17:4.80:220,5,0	1/1:30,0:30:4.22:407,4,0	1/1:28,1:29:51.81:594,52,0	1/1:31,1:32:10.30:369,10,0	1/1:10,0:10:21.07:248,21,0
chr10	24710612	.	AC	A	3621.20	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=8.312;DP=617;FS=4.340;HRun=2;HaplotypeScore=59.0708;InbreedingCoeff=0.9995;MQ=84.85;MQ0=0;MQRankSum=-0.215;QD=35.16;ReadPosRankSum=-0.474;VQSLOD=3.8095;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:54.18:0,54,809	0/0:14,0:14:42.12:0,42,607	0/0:21,0:21:60.16:0,60,843	0/0:20,0:20:52.98:0,53,739	0/0:35,0:35:99:0,102,1529	0/0:26,0:26:78.20:0,78,1121	0/0:19,0:19:57.19:0,57,854	0/0:30,0:30:90.30:0,90,1331	0/0:20,0:20:60.20:0,60,899	0/0:32,0:32:96.32:0,96,1420	0/0:27,0:27:81.27:0,81,1213	0/0:15,0:15:45.15:0,45,674	0/0:24,0:24:69.23:0,69,1031	0/0:23,0:23:69.22:0,69,1013	0/0:20,0:20:60.16:0,60,873	0/0:21,0:21:63.20:0,63,924	1/1:0,24:24:72.23:935,72,0	1/1:0,8:8:24.08:311,24,0	1/1:0,19:19:57.19:739,57,0	1/1:2,21:23:57.19:740,57,0	1/1:0,29:29:69.22:896,69,0	0/0:15,0:15:45.11:0,45,614	0/0:23,0:23:69.22:0,69,1009	0/0:22,0:22:63.21:0,63,942	0/0:20,0:20:60.20:0,60,899	0/0:22,0:22:66.22:0,66,989	0/0:32,0:32:93.30:0,93,1372	0/0:14,0:14:42.14:0,42,630
chr10	24711626	.	G	GA	16654.97	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-6.660;DP=549;FS=4.575;HRun=6;HaplotypeScore=60.5352;InbreedingCoeff=0.9120;MQ=88.96;MQ0=0;MQRankSum=-8.925;QD=32.72;ReadPosRankSum=4.613;VQSLOD=5.0632;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,13:16:33.11:415,33,0	1/1:4,7:11:18.06:226,18,0	0/0:17,0:17:39.06:0,39,388	0/0:22,0:23:32.71:0,33,465	1/1:0,27:27:81.19:995,81,0	1/1:1,16:17:42.13:528,42,0	1/1:2,12:14:39.12:490,39,0	1/1:4,28:32:87.24:1045,87,0	1/1:2,20:22:60.19:755,60,0	1/1:0,17:17:51.16:641,51,0	1/1:0,25:25:75.20:926,75,0	1/1:2,17:19:48.15:604,48,0	1/1:3,19:22:42.09:682,42,0	1/1:3,18:21:51.16:641,51,0	1/1:1,13:14:36.12:453,36,0	1/1:2,14:16:39.12:491,39,0	1/1:1,15:16:45.14:566,45,0	1/1:1,11:12:33.11:415,33,0	1/1:2,19:21:57.17:703,57,0	1/1:3,26:29:75.24:941,75,0	1/1:2,9:11:27.09:338,27,0	1/1:1,17:18:48.15:604,48,0	1/1:1,25:26:72.23:905,72,0	1/1:2,19:21:45.14:566,45,0	1/1:1,13:14:39.12:491,39,0	1/1:0,33:33:99:1218,99,0	1/1:6,27:33:77.98:979,78,0	1/1:1,1:2:3.01:38,3,0
chr10	24713754	.	T	TA	2930.80	PASS	AB=0.917;AC=11;AF=0.196;AN=56;BaseQRankSum=-12.473;DP=721;FS=4.115;HRun=10;HaplotypeScore=100.1080;InbreedingCoeff=0.8768;MQ=71.52;MQ0=0;MQRankSum=-1.142;QD=19.41;ReadPosRankSum=-0.139;VQSLOD=3.8076;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:45:67.22:0,67,197	0/1:10,1:11:8.04:8,0,145	0/0:17,0:17:32.26:0,32,231	0/0:8,0:7:5.98:0,6,49	0/0:25,1:27:35.94:0,36,486	0/0:25,0:25:65.90:0,66,539	0/0:30,0:30:77.83:0,78,627	0/0:37,0:37:87.89:0,88,691	0/0:25,0:25:56.90:0,57,462	0/0:29,0:29:68.87:0,69,558	0/0:25,0:25:59.86:0,60,483	0/0:21,0:23:63.96:0,64,499	0/0:19,0:20:49.94:0,50,396	0/0:29,0:29:68.91:0,69,566	0/0:34,0:34:77.59:0,78,772	0/0:19,0:19:53.91:0,54,438	1/1:3,21:24:60.15:640,60,0	1/1:5,12:17:15.85:303,16,0	1/1:6,19:25:60.13:624,60,0	1/1:15,28:43:45.77:797,46,0	1/1:6,25:31:69.17:736,69,0	0/0:20,0:21:40.97:0,41,326	0/0:26,0:26:62.90:0,63,515	0/0:21,0:21:59.90:0,60,487	0/0:27,0:27:74.46:0,74,595	0/0:36,0:36:83.88:0,84,688	0/0:28,0:28:65.89:0,66,538	0/0:18,0:18:50.89:0,51,412
chr10	24714034	.	T	TTTTC	7960.13	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-5.192;DP=681;FS=24.579;HRun=0;HaplotypeScore=134.8945;InbreedingCoeff=0.9863;MQ=87.12;MQ0=0;MQRankSum=-7.025;QD=75.10;ReadPosRankSum=0.691;VQSLOD=3.9150;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:66.23:0,66,1382	0/0:13,0:13:36.12:0,36,755	0/0:38,0:38:99:0,114,2261	0/0:14,0:15:26.20:0,26,711	0/0:19,0:19:57.20:0,57,1195	0/0:33,0:33:93.32:0,93,1950	0/0:31,0:31:93.29:0,93,1874	0/0:37,0:37:99:0,111,2278	0/0:23,0:23:66.21:0,66,1318	0/0:31,0:31:90.30:0,90,1846	0/0:24,0:24:72.25:0,72,1504	0/0:17,0:17:48.16:0,48,1004	0/0:28,0:28:81.28:0,81,1698	0/0:34,0:34:99:0,102,2139	0/0:31,0:31:87.30:0,87,1824	0/0:20,0:20:57.18:0,57,1158	1/1:2,22:26:62.90:1805,63,0	1/1:2,14:18:48.16:1380,48,0	1/1:5,11:16:45.15:1305,45,0	1/1:1,25:27:81.28:2304,81,0	1/1:5,13:19:42.14:1166,42,0	0/0:16,0:16:45.15:0,45,943	0/0:21,0:21:63.22:0,63,1319	0/0:31,0:31:90.31:0,90,1854	0/0:24,0:24:72.23:0,72,1469	0/0:32,0:32:90.29:0,90,1816	0/0:31,0:31:90.31:0,90,1883	0/0:3,0:3:9.03:0,9,189
chr10	24715042	.	TCTTTCTTCCTTTC	T	22243.80	PASS	AB=0.823;AC=50;AF=0.893;AN=56;BaseQRankSum=7.849;DP=627;FS=0.000;HRun=0;HaplotypeScore=236.0790;InbreedingCoeff=0.6249;MQ=59.51;MQ0=1;MQRankSum=-7.284;QD=39.37;ReadPosRankSum=6.788;VQSLOD=3.8452;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,3:11:12.04:447,12,0	1/1:4,6:10:6.02:224,6,0	0/1:15,0:11:5.89:6,0,381	0/0:24,0:19:27.51:0,28,577	1/1:5,17:22:38.91:809,39,0	1/1:3,16:19:24.08:872,24,0	1/1:8,14:22:15.05:550,15,0	0/0:37,0:37:66.20:0,66,1923	1/1:4,7:11:24.08:828,24,0	1/1:13,27:40:68.93:1764,69,0	1/1:10,22:32:45.07:1476,45,0	1/1:1,18:19:36.12:1321,36,0	1/1:8,23:31:33.11:1230,33,0	1/1:7,23:30:33.11:1166,33,0	1/1:10,17:27:27.09:1006,27,0	1/1:1,13:14:21.01:767,21,0	1/1:16,0:15:13.33:379,13,0	0/1:9,11:20:2.33:161,0,2	1/1:10,11:19:29.99:465,30,0	1/1:8,10:18:33.10:1143,33,0	1/1:6,14:20:3.01:104,3,0	1/1:9,27:36:39.04:1172,39,0	1/1:4,21:25:36.12:1316,36,0	1/1:5,12:17:12.04:379,12,0	1/1:1,24:25:48.16:1740,48,0	1/1:9,23:32:52.36:1264,52,0	1/1:8,13:21:27.09:981,27,0	1/1:7,3:10:24.08:673,24,0
chr10	24715065	.	T	TTCC	5230.05	PASS	AB=0.983;AC=26;AF=0.464;AN=56;BaseQRankSum=3.825;DP=609;FS=0.804;HRun=0;HaplotypeScore=196.9437;InbreedingCoeff=-0.6551;MQ=53.15;MQ0=1;MQRankSum=-5.601;QD=10.63;ReadPosRankSum=7.285;VQSLOD=3.8730;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:12,1:12:99:135,0,233	1/1:8,0:8:5.96:45,6,0	0/0:22,0:16:18.62:0,19,553	0/0:29,0:18:39.05:0,39,545	0/1:24,0:24:99:133,0,504	0/1:19,0:19:99:209,0,148	0/1:19,0:19:99:151,0,197	0/0:39,0:39:99:0,111,1777	0/1:14,1:15:99:206,0,302	0/1:34,0:34:99:361,0,620	0/1:25,0:25:68.25:488,0,68	0/1:19,0:19:99:185,0,102	0/0:27,0:27:2.35:0,2,276	0/1:28,0:28:99:330,0,212	0/1:19,0:19:65.60:66,0,189	0/1:14,0:14:40:278,0,40	0/1:19,2:20:99:279,0,527	0/1:19,0:19:99:128,0,178	0/1:12,0:10:99:267,0,116	0/1:20,0:20:25.36:25,0,466	1/1:15,0:15:1.05:65,1,0	0/1:30,0:31:99:233,0,282	0/1:25,0:25:99:285,0,148	0/1:21,1:22:95.23:95,0,282	0/1:29,0:29:99:195,0,247	0/1:32,0:32:99:488,0,468	0/1:18,0:18:99:215,0,143	0/1:10,1:11:99:366,0,115
chr10	24715147	.	T	TTTCC	2638.21	PASS	AB=0.953;AC=22;AF=0.440;AN=50;BaseQRankSum=-0.288;DP=651;FS=24.387;HRun=0;HaplotypeScore=112.9634;InbreedingCoeff=0.7344;MQ=56.30;MQ0=7;MQRankSum=-0.273;QD=8.74;ReadPosRankSum=0.220;VQSLOD=0.5379;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:20:9.18:76,9,0	0/0:4,0:4:3.01:0,3,46	./.	./.	0/0:38,0:38:42.13:0,42,618	0/0:14,0:14:18.03:0,18,231	0/0:23,0:23:24.06:0,24,337	./.	1/1:13,10:23:18.06:417,18,0	0/0:30,0:29:30.09:0,30,438	0/0:17,0:17:36.06:0,36,467	0/0:20,0:20:24.08:0,24,363	0/0:27,0:27:33.06:0,33,452	0/0:30,0:30:48.16:0,48,729	0/0:26,0:26:51.17:0,51,768	0/0:24,0:24:54.16:0,54,758	1/1:29,0:27:16.96:147,17,0	1/1:20,0:19:6:51,6,0	1/1:15,0:13:3.01:41,3,0	1/1:33,0:33:23.35:159,23,0	1/1:14,0:15:8.17:74,8,0	0/0:20,0:20:15.05:0,15,221	0/0:26,0:26:45.13:0,45,644	0/1:50,0:49:21.53:22,0,413	1/1:30,5:35:20.38:619,20,0	0/1:26,3:28:19.08:401,0,19	1/1:13,6:19:24.08:546,24,0	1/1:6,6:11:12.04:279,12,0
chr10	24715169	.	TC	T	122.78	PASS	AB=0.667;AC=1;AF=0.019;AN=54;BaseQRankSum=3.287;DP=578;FS=13.493;HRun=2;HaplotypeScore=72.2779;InbreedingCoeff=-0.0248;MQ=54.38;MQ0=18;MQRankSum=-0.426;QD=8.77;ReadPosRankSum=-2.823;VQSLOD=-0.6439;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:21:50.59:0,51,678	0/0:6,0:6:15.05:0,15,216	./.	0/0:7,0:4:4.97:0,5,60	0/0:27,0:27:81.26:0,81,1173	0/0:16,0:16:48.14:0,48,660	0/0:20,0:20:60.15:0,60,828	0/1:7,7:11:80.01:197,0,80	0/0:22,0:22:45.10:0,45,545	0/0:27,0:26:78.26:0,78,1141	0/0:17,0:17:51.13:0,51,696	0/0:21,0:21:63.21:0,63,925	0/0:21,0:21:63.21:0,63,928	0/0:26,0:26:78.22:0,78,1120	0/0:30,0:30:90.22:0,90,1280	0/0:29,0:28:87.28:0,87,1261	0/0:25,0:23:62.02:0,62,876	0/0:14,0:13:33.09:0,33,453	0/0:17,0:8:24.04:0,24,307	0/0:32,0:31:89.06:0,89,1170	0/0:18,0:17:34.05:0,34,477	0/0:19,0:19:57.17:0,57,793	0/0:21,0:21:62.86:0,63,863	0/0:44,0:42:99:0,118,1676	0/0:32,0:32:93.24:0,93,1186	0/0:25,0:24:66.17:0,66,862	0/0:13,0:13:39.07:0,39,443	0/0:9,0:8:14.98:0,15,130
chr10	24715450	.	GA	G	2082.46	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=9.068;DP=637;FS=0.000;HRun=7;HaplotypeScore=67.6201;InbreedingCoeff=0.9802;MQ=82.00;MQ0=1;MQRankSum=-0.871;QD=22.15;ReadPosRankSum=-0.509;VQSLOD=2.9749;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:88.14:0,88,1075	0/0:5,0:5:11.98:0,12,131	0/0:24,0:22:53.43:0,53,631	0/0:23,0:23:32.54:0,33,500	0/0:28,0:28:75.21:0,75,912	0/0:27,0:27:78.25:0,78,976	0/0:21,0:21:60.15:0,60,713	0/0:32,0:32:81.24:0,81,985	0/0:18,0:18:48.14:0,48,589	0/0:28,1:29:53.65:0,54,960	0/0:17,0:17:45.13:0,45,550	0/0:27,0:27:76.14:0,76,960	0/0:21,0:21:57.16:0,57,698	0/0:21,0:21:60.19:0,60,749	0/0:28,0:28:75.23:0,75,927	0/0:29,0:29:87.26:0,87,1073	1/1:3,27:30:78.17:794,78,0	1/1:2,10:12:22.32:253,22,0	1/1:2,13:15:39:356,39,0	1/1:3,21:24:51.10:518,51,0	1/1:0,13:13:33.08:336,33,0	0/0:30,0:30:78.12:0,78,913	0/0:29,0:29:75.24:0,75,936	0/0:15,0:15:11.42:0,11,376	0/0:16,0:16:39.12:0,39,488	0/0:31,1:32:56.69:0,57,1022	0/0:33,0:32:90.28:0,90,1112	0/0:5,0:5:15.05:0,15,187
chr10	24716114	.	TAGGG	T	18628.08	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=1.813;DP=434;FS=6.915;HRun=0;HaplotypeScore=81.1153;InbreedingCoeff=0.9299;MQ=82.32;MQ0=4;MQRankSum=-6.597;QD=48.38;ReadPosRankSum=8.556;VQSLOD=4.2262;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,28:29:72.25:1395,72,0	1/1:0,6:6:18.06:349,18,0	0/0:16,0:16:40.02:0,40,980	0/0:13,0:13:39.11:0,39,876	1/1:0,16:16:42.10:776,42,0	1/1:1,32:33:90.31:1744,90,0	1/1:0,10:10:27.09:523,27,0	0/0:20,0:20:57.20:0,57,1562	1/1:3,20:23:60.21:1162,60,0	1/1:0,14:14:39.13:756,39,0	1/1:0,6:6:18.06:348,18,0	1/1:2,16:18:36.12:697,36,0	1/1:0,14:13:33.11:639,33,0	1/1:2,16:18:45.15:872,45,0	1/1:2,22:24:60.21:1163,60,0	1/1:1,17:17:48.16:930,48,0	1/1:2,13:15:4.48:553,4,0	1/1:1,9:10:24.08:465,24,0	1/1:2,11:12:30.10:581,30,0	1/1:0,10:9:27.09:523,27,0	1/1:0,14:14:36.12:698,36,0	1/1:0,7:7:15.05:290,15,0	1/1:0,4:4:12.04:232,12,0	1/1:0,17:17:39.13:736,39,0	1/1:1,8:8:24.08:465,24,0	1/1:0,22:21:60.21:1163,60,0	1/1:2,22:24:48.16:930,48,0	1/1:0,11:11:33.11:638,33,0
chr10	24716337	.	A	AAT	5087.04	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-4.131;DP=239;FS=13.083;HRun=0;HaplotypeScore=32.2278;InbreedingCoeff=0.5188;MQ=90.11;MQ0=2;MQRankSum=-3.170;QD=29.58;ReadPosRankSum=4.294;VQSLOD=5.1271;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,9:10:21.07:354,21,0	1/1:0,4:4:9.03:152,9,0	0/0:8,0:5:0.47:0,0,1	0/0:27,0:18:21.89:0,22,201	1/1:4,11:15:33.11:506,33,0	1/1:0,8:9:18.06:304,18,0	1/1:1,0:1:2.99:24,3,0	0/0:32,0:32:63.17:0,63,773	1/1:1,5:6:12.04:190,12,0	1/1:4,7:11:21.07:343,21,0	1/1:2,8:10:24.08:362,24,0	1/1:0,3:3:6.02:101,6,0	1/1:0,5:5:15.05:253,15,0	1/1:2,3:5:3.01:51,3,0	1/1:0,7:8:12.04:202,12,0	1/1:0,4:3:9.03:152,9,0	1/1:1,3:20:48.04:474,48,0	1/1:3,0:6:6:53,6,0	1/1:4,0:12:18.89:151,19,0	1/1:0,0:5:8.98:75,9,0	1/1:2,0:2:2.98:22,3,0	1/1:2,0:2:6.01:74,6,0	1/1:1,2:3:6.02:101,6,0	1/1:1,0:1:3.01:44,3,0	1/1:0,4:4:12.04:202,12,0	1/1:3,1:4:6.02:87,6,0	1/1:0,15:15:36.12:607,36,0	1/1:0,6:6:12.04:202,12,0
chr10	24716944	.	CATAAAGAAATAAATAAATACATAAATAAATACATAAATAA	C	8119.60	PASS	AC=48;AF=0.923;AN=52;BaseQRankSum=7.888;DP=334;FS=7.681;HRun=0;HaplotypeScore=244.9132;InbreedingCoeff=0.4883;MQ=40.41;MQ0=0;MQRankSum=-6.814;QD=27.52;ReadPosRankSum=6.561;VQSLOD=1.8827;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:1,15:16:3.01:287,3,0	1/1:9,0:9:24.07:296,24,0	0/0:5,0:2:6.02:0,6,299	./.	1/1:10,0:10:18.05:228,18,0	1/1:9,0:9:15.03:169,15,0	1/1:6,0:6:6.02:86,6,0	0/0:31,0:31:84.28:0,84,5494	1/1:13,0:13:27.08:320,27,0	1/1:3,11:14:16.61:499,17,0	1/1:1,31:32:12.04:1010,12,0	1/1:1,12:13:6.02:616,6,0	1/1:7,0:7:15.05:179,15,0	1/1:3,12:15:3.01:308,3,0	1/1:6,0:6:18.05:214,18,0	1/1:0,14:14:6.02:616,6,0	1/1:7,0:7:15.04:172,15,0	./.	1/1:4,0:4:6.01:68,6,0	1/1:1,23:24:6.02:594,6,0	1/1:7,0:7:7.26:113,7,0	1/1:9,0:9:15.04:172,15,0	1/1:3,20:23:6.02:565,6,0	1/1:8,0:8:3:25,3,0	1/1:14,0:14:27.08:321,27,0	1/1:3,16:19:28.27:902,28,0	1/1:13,0:13:21.05:248,21,0	1/1:3,0:3:9.03:111,9,0
chr10	24717075	.	A	AAT	2426.23	PASS	AB=1.000;AC=35;AF=0.648;AN=54;BaseQRankSum=6.877;DP=385;FS=2.013;HRun=0;HaplotypeScore=120.2210;InbreedingCoeff=0.7692;MQ=62.77;MQ0=11;MQRankSum=-2.581;QD=10.83;ReadPosRankSum=2.648;VQSLOD=3.7173;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:8:3.84:0,4,21	./.	0/0:25,0:17:36.41:0,36,400	0/0:29,0:11:18.66:0,19,164	1/1:25,0:25:2.94:18,3,0	1/1:13,0:13:23.10:187,23,0	1/1:15,0:13:20.95:179,21,0	0/0:29,0:29:54.79:0,55,527	1/1:7,0:8:17.05:152,17,0	1/1:11,0:11:31.27:347,31,0	1/1:18,0:18:20.96:172,21,0	1/1:8,0:8:3:25,3,0	0/1:11,0:10:0:0,0,0	1/1:8,0:8:17.90:164,18,0	1/1:10,0:10:8.92:67,9,0	1/1:11,1:11:17.99:160,18,0	0/0:10,0:9:5.87:0,6,44	0/0:6,0:5:2.84:0,3,23	0/0:16,0:16:30.55:0,31,249	0/0:20,0:18:18.20:0,18,221	0/0:11,0:10:8.92:0,9,89	1/1:10,0:9:17.99:174,18,0	1/1:19,0:18:17.24:145,17,0	1/1:5,0:5:2.99:24,3,0	1/1:8,1:8:5.96:55,6,0	1/1:15,2:17:49.72:521,50,0	1/1:15,0:15:9.03:119,9,0	1/1:10,0:10:16.09:108,16,0
chr10	24717076	.	A	ATATCTCTC	4794.44	PASS	AB=0.761;AC=38;AF=0.679;AN=56;BaseQRankSum=4.818;DP=430;FS=3.343;HRun=0;HaplotypeScore=165.2759;InbreedingCoeff=0.6151;MQ=59.95;MQ0=11;MQRankSum=-3.038;QD=16.42;ReadPosRankSum=0.705;VQSLOD=4.3211;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:9,0:9:13:15,0,13	1/1:4,7:11:6.02:205,6,0	0/0:25,0:17:36.41:0,36,400	0/0:29,0:11:16.34:0,16,214	1/1:5,0:28:2.94:18,3,0	1/1:16,0:17:23.02:186,23,0	1/1:18,0:16:27.39:345,27,0	0/0:31,0:31:40.31:0,40,754	1/1:9,0:10:17.05:226,17,0	1/1:13,0:16:46.30:1152,46,0	1/1:18,0:18:20.96:172,21,0	1/1:8,1:9:3:25,3,0	0/1:1,8:9:0:0,0,0	1/1:8,0:9:17.90:189,18,0	1/1:10,1:11:8.92:67,9,0	1/1:9,2:12:17.99:213,18,0	0/1:11,0:10:22.71:23,0,70	0/0:6,0:5:9.01:0,9,126	0/0:15,0:15:11.81:0,12,320	0/0:21,0:19:44.13:0,44,435	0/0:11,0:10:14.95:0,15,223	1/1:14,0:13:20.94:192,21,0	1/1:21,0:20:16.69:167,17,0	1/1:7,0:7:2.99:24,3,0	1/1:9,1:10:5.97:109,6,0	1/1:17,1:19:51.20:1132,51,0	0/1:1,13:15:4.40:217,0,4	1/1:12,0:12:18.58:118,19,0
chr10	24717106	.	CTGTG	C	123.46	PASS	AB=1.000;AC=4;AF=0.105;AN=38;BaseQRankSum=-2.494;DP=344;FS=0.000;HRun=0;HaplotypeScore=118.4945;InbreedingCoeff=0.3505;MQ=35.94;MQ0=15;MQRankSum=1.800;QD=1.93;ReadPosRankSum=-0.941;VQSLOD=1.7532;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:10,0:9:0:0,0,0	0/0:12,0:11:6.96:0,7,84	./.	./.	0/0:19,0:19:3.01:0,3,46	./.	0/0:18,0:16:9.50:0,10,143	1/1:30,5:33:14.67:207,15,0	0/0:7,0:7:5.90:0,6,43	0/0:14,0:14:23.74:0,24,261	0/0:16,0:14:6:0,6,71	./.	./.	./.	0/0:6,0:6:2.99:0,3,24	./.	./.	./.	0/0:9,0:10:12.93:0,13,172	0/1:19,0:17:0:0,0,0	0/0:8,0:7:2.94:0,3,18	0/0:14,0:11:2.99:0,3,24	0/0:24,0:22:2.04:0,2,6	0/0:8,0:6:3.01:0,3,47	0/0:13,0:12:7.93:0,8,46	0/0:19,0:19:23.99:0,24,316	0/0:11,0:11:11.97:0,12,151	0/0:10,0:9:2.60:0,3,10
chr10	24717116	.	G	GGTGTGTGTGTGTGTA	1564.19	PASS	AB=0.961;AC=23;AF=0.442;AN=52;BaseQRankSum=-2.498;DP=342;FS=14.601;HRun=0;HaplotypeScore=153.7327;InbreedingCoeff=-0.0785;MQ=34.75;MQ0=14;MQRankSum=3.002;QD=6.66;ReadPosRankSum=-1.647;VQSLOD=1.5850;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/1:14,0:13:7.06:62,0,7	./.	0/0:10,0:3:8.68:0,9,73	1/1:17,0:18:5.94:42,6,0	0/1:16,0:15:32.57:200,0,33	0/1:15,0:13:25.49:77,0,25	0/0:24,0:22:66.21:0,66,1129	0/1:7,0:7:9.97:10,0,101	0/1:14,0:15:99:199,0,511	1/1:15,0:13:8.99:116,9,0	1/1:7,0:6:2.99:24,3,0	0/1:11,0:11:3.23:35,0,3	0/0:2,0:8:0:0,0,0	1/1:4,0:9:2.99:24,3,0	0/1:9,0:7:17.98:18,0,50	0/0:8,0:7:14.97:0,15,152	0/0:6,0:6:8.97:0,9,83	0/1:10,0:10:99:235,0,153	0/0:20,0:18:11.87:0,12,144	0/0:8,0:8:17.95:0,18,199	1/1:14,0:12:5.97:46,6,0	0/1:20,0:19:0:0,0,0	0/0:7,0:5:2.37:0,2,8	0/1:12,2:19:33.22:33,0,65	0/1:16,0:17:99:439,0,407	0/1:9,0:9:47.60:48,0,135	0/1:7,0:6:49.37:107,0,49
chr10	24717820	.	CAATAAATA	C	10776.63	PASS	AB=1.000;AC=48;AF=0.889;AN=54;BaseQRankSum=0.784;DP=364;FS=4.354;HRun=0;HaplotypeScore=257.2327;InbreedingCoeff=0.4750;MQ=44.54;MQ0=3;MQRankSum=-8.532;QD=33.26;ReadPosRankSum=6.731;VQSLOD=4.0903;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:8,0:8:17.78:178,18,0	1/1:8,0:8:22.47:162,22,0	./.	0/0:3,0:3:6.02:0,6,89	1/1:9,8:17:44.87:771,45,0	1/1:13,7:20:44.83:728,45,0	1/1:3,1:4:11.95:172,12,0	0/0:37,0:37:90.29:0,90,2778	1/1:5,2:7:14.21:270,14,0	1/1:12,1:13:35.73:408,36,0	1/1:9,4:13:29.36:338,29,0	1/1:12,5:17:44.47:621,44,0	1/1:11,3:14:38.85:655,39,0	1/1:16,4:20:56.15:711,56,0	1/1:9,3:12:32.29:527,32,0	1/1:12,2:14:32.56:453,33,0	1/1:5,0:5:2.87:26,3,0	0/1:14,0:14:62.99:294,0,63	1/1:10,0:8:17.93:204,18,0	1/1:17,0:17:41.83:651,42,0	1/1:4,0:4:5.92:41,6,0	1/1:10,0:10:26.68:274,27,0	1/1:13,4:17:40.56:570,41,0	1/1:9,0:9:6.36:94,6,0	1/1:12,4:15:44.53:648,45,0	1/1:16,8:24:62.72:1062,63,0	1/1:22,1:21:62.58:757,63,0	0/1:8,0:7:86.01:161,0,86
chr10	24717824	.	AAATAAATAAATTAATT	A	13226.68	PASS	AB=0.876;AC=46;AF=0.852;AN=54;BaseQRankSum=-3.289;DP=348;FS=1.843;HRun=0;HaplotypeScore=305.7088;InbreedingCoeff=0.3077;MQ=43.52;MQ0=6;MQRankSum=-6.404;QD=42.39;ReadPosRankSum=7.380;VQSLOD=2.7833;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,2:7:17.78:269,18,0	0/1:7,0:8:24.48:152,0,24	./.	0/0:3,0:3:9.03:0,9,150	1/1:15,0:16:44.87:921,45,0	1/1:17,1:19:44.83:882,45,0	1/1:4,0:4:11.95:226,12,0	0/0:33,0:33:93.30:0,93,4708	0/1:6,0:7:24.10:285,0,24	1/1:11,1:12:28.64:437,29,0	1/1:11,0:11:8.57:386,9,0	1/1:15,1:16:35.89:672,36,0	1/1:10,2:14:38.85:788,39,0	1/1:17,1:20:23.64:795,24,0	1/1:10,0:12:11.31:615,11,0	1/1:13,1:14:20.81:490,21,0	1/1:4,0:4:2.97:26,3,0	0/1:11,3:13:65.09:478,0,65	1/1:10,1:7:17.93:283,18,0	1/1:9,8:17:41.83:1221,42,0	1/1:3,0:3:5.92:41,6,0	1/1:8,1:10:26.68:339,27,0	1/1:13,0:15:14.54:688,15,0	1/1:8,0:8:6.23:104,6,0	1/1:12,1:14:31.25:781,31,0	1/1:19,2:22:62.72:1253,63,0	1/1:17,1:20:62.58:943,63,0	0/1:10,1:10:99:151,0,320
chr10	24717865	.	TTA	T	10823.85	PASS	AC=48;AF=0.889;AN=54;BaseQRankSum=10.288;DP=346;FS=0.590;HRun=0;HaplotypeScore=274.0428;InbreedingCoeff=0.7702;MQ=57.36;MQ0=2;MQRankSum=-10.947;QD=38.25;ReadPosRankSum=9.018;VQSLOD=3.7599;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,3:4:10.02:77,10,0	1/1:0,7:10:29.58:361,30,0	0/0:13,0:10:26.38:0,26,373	0/0:13,0:10:2:0,2,109	1/1:0,20:21:60.08:822,60,0	1/1:0,22:22:63.21:943,63,0	1/1:0,5:5:15.05:214,15,0	0/0:37,0:37:81.26:0,81,1702	1/1:0,9:11:29.50:381,30,0	1/1:0,9:11:32.81:435,33,0	1/1:0,12:13:38.87:544,39,0	1/1:1,12:15:41.66:551,42,0	1/1:0,13:13:39.13:576,39,0	1/1:0,13:15:44.73:605,45,0	1/1:0,16:17:50.91:727,51,0	1/1:0,8:10:23.66:294,24,0	1/1:0,0:1:3.01:35,3,0	1/1:1,4:7:17.62:222,18,0	1/1:4,2:6:12.21:160,12,0	1/1:0,12:19:57.07:729,57,0	./.	1/1:0,5:5:15.05:225,15,0	1/1:0,13:15:44.67:590,45,0	1/1:0,5:5:3.01:45,3,0	1/1:0,15:16:47.95:691,48,0	1/1:0,17:17:51.17:767,51,0	1/1:1,16:18:50.97:714,51,0	1/1:0,1:5:14.65:115,15,0
chr10	24717868	.	T	TC	5293.54	PASS	AB=0.818;AC=47;AF=0.870;AN=54;BaseQRankSum=9.689;DP=403;FS=0.000;HRun=0;HaplotypeScore=303.3540;InbreedingCoeff=0.7706;MQ=55.44;MQ0=2;MQRankSum=-9.858;QD=15.62;ReadPosRankSum=8.077;VQSLOD=4.1894;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,1:6:8.89:62,9,0	1/1:7,3:10:29.14:180,29,0	0/0:13,0:10:29.65:0,30,352	0/0:14,0:11:20.53:0,21,233	1/1:28,1:29:73.68:407,74,0	1/1:25,0:25:66.66:385,67,0	1/1:7,0:7:18.55:107,19,0	0/0:36,0:36:99:0,108,1408	1/1:13,2:15:34.67:209,35,0	1/1:10,2:12:26.47:204,26,0	1/1:17,1:18:49.61:328,50,0	1/1:15,2:17:46.76:301,47,0	1/1:15,0:15:43.32:241,43,0	1/1:16,2:18:48.79:278,49,0	1/1:17,1:18:51.71:305,52,0	1/1:9,2:11:23.38:150,23,0	1/1:2,1:3:8.90:75,9,0	1/1:8,2:10:23.38:151,23,0	0/1:7,2:7:23.94:89,0,24	1/1:17,7:24:64.47:413,64,0	./.	1/1:7,0:7:17.36:102,17,0	1/1:14,2:16:45.81:268,46,0	1/1:7,0:7:8.77:56,9,0	1/1:17,1:18:48.92:273,49,0	1/1:17,0:17:49.15:286,49,0	1/1:20,1:21:54.17:317,54,0	1/1:2,4:6:10.73:106,11,0
chr10	24717877	.	T	TTTCC	9413.89	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=0.219;DP=457;FS=1.138;HRun=0;HaplotypeScore=313.7363;InbreedingCoeff=0.8500;MQ=64.52;MQ0=1;MQRankSum=-7.636;QD=24.45;ReadPosRankSum=5.629;VQSLOD=3.9183;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,0:7:10.75:98,11,0	1/1:10,0:10:27.56:368,28,0	0/0:18,0:15:35.98:0,36,549	0/0:18,0:15:15.18:0,15,334	1/1:31,1:32:66.96:718,67,0	1/1:26,0:26:44.95:475,45,0	1/1:7,0:7:7.05:60,7,0	0/0:36,0:36:99:0,99,1656	1/1:14,2:16:40.53:480,41,0	1/1:14,2:16:30.04:517,30,0	1/1:18,1:19:38.52:536,39,0	1/1:18,0:20:35.10:435,35,0	1/1:18,0:18:37.25:359,37,0	1/1:17,2:19:35.24:430,35,0	1/1:18,1:19:49.09:566,49,0	1/1:13,0:13:26.23:301,26,0	1/1:3,0:3:8.28:45,8,0	1/1:12,0:12:27.38:304,27,0	1/1:11,0:10:16.54:270,17,0	1/1:29,0:29:82.86:962,83,0	1/1:2,0:2:3:26,3,0	1/1:9,0:9:24.57:213,25,0	1/1:16,0:16:39.45:512,39,0	1/1:9,0:9:12.40:123,12,0	1/1:20,1:21:44.62:532,45,0	1/1:19,0:19:19.80:288,20,0	1/1:23,0:24:55.49:575,55,0	1/1:7,0:8:11.33:219,11,0
chr10	24717879	.	T	TC	2316.30	PASS	AB=0.765;AC=19;AF=0.339;AN=56;BaseQRankSum=12.282;DP=457;FS=4.456;HRun=0;HaplotypeScore=298.5619;InbreedingCoeff=-0.5502;MQ=67.82;MQ0=1;MQRankSum=-7.642;QD=7.24;ReadPosRankSum=-2.018;VQSLOD=2.5195;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:4,3:7:30.23:30,0,87	0/0:9,1:10:5.94:0,6,264	0/0:19,0:16:39.04:0,39,515	0/0:20,0:17:21.28:0,21,389	0/1:23,8:31:99:193,0,584	0/1:15,10:25:99:291,0,407	0/1:2,5:7:64.50:155,0,65	0/0:34,0:34:99:0,99,1339	0/1:14,3:17:61.66:62,0,327	0/1:13,3:16:99:109,0,351	0/1:15,4:19:50.80:51,0,423	0/1:13,6:20:99:237,0,307	0/1:11,7:18:99:140,0,359	0/1:13,6:19:99:123,0,339	0/1:13,5:18:99:112,0,376	0/1:10,2:12:36.37:36,0,237	0/0:3,0:3:5.36:0,5,80	0/0:11,0:11:26.95:0,27,289	0/1:8,3:10:60.96:61,0,250	0/0:30,0:30:85.29:0,85,876	0/0:2,0:2:3.01:0,3,41	0/1:7,2:9:20.65:21,0,243	0/1:12,7:19:99:196,0,262	0/0:7,1:8:8.93:0,9,98	0/1:14,6:20:99:110,0,392	0/1:8,11:19:99:388,0,226	0/1:18,6:24:99:122,0,529	0/1:7,2:9:37.49:37,0,98
chr10	24720283	.	T	TC	24358.76	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-9.150;DP=663;FS=16.764;HRun=2;HaplotypeScore=59.5972;InbreedingCoeff=0.9943;MQ=83.78;MQ0=0;MQRankSum=-6.716;QD=41.01;ReadPosRankSum=6.889;VQSLOD=2.6685;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,44:47:99:1857,129,0	1/1:0,12:12:36.12:518,36,0	0/0:17,0:17:45.14:0,45,558	0/0:21,0:21:51.14:0,51,615	1/1:0,33:33:99:1425,99,0	1/1:0,22:22:60.20:864,60,0	1/1:0,27:27:75.25:1080,75,0	0/0:31,0:31:87.26:0,87,1069	1/1:0,20:20:57.19:821,57,0	1/1:2,26:29:84.24:1180,84,0	1/1:0,15:15:45.15:647,45,0	1/1:1,18:19:54.18:777,54,0	1/1:0,23:24:72.24:1033,72,0	1/1:1,19:20:54.18:778,54,0	1/1:0,38:38:99:1512,105,0	1/1:0,22:22:63.21:907,63,0	1/1:0,31:31:93.31:1339,93,0	1/1:1,13:14:36.12:518,36,0	1/1:0,17:17:51.17:732,51,0	1/1:1,31:32:87.29:1252,87,0	1/1:1,19:20:57.19:821,57,0	1/1:0,26:26:75.25:1080,75,0	1/1:0,19:19:54.18:777,54,0	1/1:0,25:25:72.24:1037,72,0	1/1:0,24:24:69.23:993,69,0	1/1:1,27:28:84.28:1203,84,0	1/1:2,23:25:69.23:990,69,0	1/1:0,5:5:15.05:216,15,0
chr10	24720827	.	AT	A	15006.83	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=4.119;DP=533;FS=27.062;HRun=2;HaplotypeScore=87.1878;InbreedingCoeff=0.9840;MQ=72.25;MQ0=0;MQRankSum=-3.886;QD=33.42;ReadPosRankSum=5.947;VQSLOD=2.8789;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:27.27:0,27,163	1/1:0,5:5:15.05:193,15,0	0/0:13,0:13:13.08:0,13,403	0/0:7,0:7:18.06:0,18,250	1/1:0,34:34:96.20:1202,96,0	1/1:0,21:21:57.18:731,57,0	1/1:1,16:17:48.16:617,48,0	0/0:38,0:38:99:0,111,1384	1/1:0,12:12:33.11:426,33,0	1/1:0,25:25:75.03:928,75,0	1/1:0,16:16:45.02:539,45,0	1/1:0,14:14:39.13:502,39,0	1/1:1,14:15:26.97:348,27,0	1/1:0,25:25:57.18:732,57,0	1/1:1,17:18:45.04:558,45,0	1/1:0,18:18:45.15:579,45,0	1/1:0,23:23:54.18:696,54,0	1/1:1,11:12:24.08:309,24,0	1/1:0,23:23:69.19:850,69,0	1/1:0,25:25:75.18:945,75,0	1/1:1,13:14:36.12:464,36,0	1/1:2,29:31:59.85:909,60,0	1/1:0,21:21:50.84:657,51,0	1/1:0,14:14:36.12:464,36,0	1/1:0,19:19:51.17:657,51,0	1/1:0,22:22:63.20:812,63,0	1/1:0,18:18:48.16:618,48,0	1/1:0,7:7:21.07:270,21,0
chr10	24722118	.	ACTCT	A	2364.12	PASS	AB=1.000;AC=33;AF=0.611;AN=54;BaseQRankSum=-1.290;DP=477;FS=1.728;HRun=0;HaplotypeScore=122.1964;InbreedingCoeff=0.5476;MQ=72.81;MQ0=16;MQRankSum=3.053;QD=11.00;ReadPosRankSum=3.569;VQSLOD=3.2414;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:24.08:0,24,413	1/1:6,0:6:8.94:93,9,0	0/0:53,0:26:3.01:0,3,39	0/0:67,0:21:0.38:0,0,2	1/1:7,2:9:11.95:134,12,0	1/1:7,0:7:10.50:91,11,0	1/1:22,0:21:14.44:129,14,0	0/0:26,0:26:21.05:0,21,294	1/1:11,1:12:17.75:175,18,0	1/1:14,1:15:22.66:295,23,0	1/1:10,0:9:12.26:197,12,0	0/1:9,0:9:11.01:36,0,11	0/1:11,0:10:12.11:64,0,12	1/1:5,0:5:8.99:105,9,0	1/1:12,2:14:20.89:223,21,0	1/1:12,1:13:11.90:112,12,0	0/0:9,0:9:15.05:0,15,257	0/0:5,0:5:6.91:0,7,111	0/0:18,0:18:15.01:0,15,265	0/0:24,0:32:1.60:0,2,32	0/0:14,0:14:3.01:0,3,36	./.	0/1:11,0:10:15.62:16,0,32	1/1:12,0:12:2.97:22,3,0	1/1:15,2:16:23.58:287,24,0	1/1:16,1:18:21.41:372,21,0	1/1:14,1:15:6.23:111,6,0	1/1:8,0:8:10.25:83,10,0
chr10	24722527	.	C	CTTT	4124.09	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=5.201;DP=261;FS=30.421;HRun=12;HaplotypeScore=80.4849;InbreedingCoeff=0.6315;MQ=60.22;MQ0=1;MQRankSum=-4.189;QD=18.17;ReadPosRankSum=-0.437;VQSLOD=0.0140;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,0:16:17.15:65,17,0	1/1:0,0:1:3.01:43,3,0	0/0:8,0:8:8.73:0,9,70	0/0:5,0:3:3.01:0,3,34	1/1:5,3:8:11.88:113,12,0	1/1:3,4:8:21.05:308,21,0	1/1:7,1:8:14.95:172,15,0	0/0:21,0:21:22.92:0,23,397	1/1:9,2:13:32.88:362,33,0	1/1:7,2:9:14.93:142,15,0	1/1:5,2:8:11.96:137,12,0	1/1:4,3:7:8.94:95,9,0	1/1:5,1:6:14.91:154,15,0	1/1:9,2:11:23.94:286,24,0	1/1:10,1:12:20.88:201,21,0	1/1:7,6:14:32.96:424,33,0	1/1:5,0:11:10.68:42,11,0	1/1:3,0:10:12.23:77,12,0	1/1:8,0:14:7.48:17,7,0	1/1:5,0:10:4.62:10,5,0	1/1:2,0:5:1.25:3,1,0	1/1:4,1:6:9.03:135,9,0	1/1:3,2:6:17.95:211,18,0	1/1:7,1:8:2.97:20,3,0	1/1:3,2:5:14.95:189,15,0	1/1:9,3:12:24.88:330,25,0	1/1:8,4:13:30:422,30,0	1/1:3,2:5:9.03:165,9,0
chr10	24722590	.	GT	G	2111.39	PASS	AB=0.786;AC=46;AF=0.920;AN=50;BaseQRankSum=5.177;DP=129;FS=0.000;HRun=3;HaplotypeScore=21.5876;InbreedingCoeff=0.1989;MQ=41.78;MQ0=4;MQRankSum=-2.714;QD=20.11;ReadPosRankSum=2.736;VQSLOD=2.9160;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,4:3:6.02:74,6,0	1/1:0,2:2:6.02:74,6,0	./.	0/1:7,0:3:0.51:1,0,1	1/1:0,6:6:9.03:111,9,0	1/1:0,8:7:9.03:109,9,0	1/1:0,6:6:12.04:148,12,0	0/0:18,0:17:51.13:0,51,693	1/1:0,4:4:9.03:111,9,0	1/1:1,4:5:12.04:147,12,0	1/1:0,6:5:9.03:111,9,0	1/1:0,2:2:3.01:37,3,0	1/1:1,3:4:3.01:35,3,0	1/1:0,5:5:15.05:185,15,0	1/1:0,4:4:6.02:74,6,0	./.	0/1:1,3:3:17.97:31,0,18	1/1:0,2:2:6.02:74,6,0	1/1:0,9:8:24.08:297,24,0	1/1:0,1:1:3.01:37,3,0	./.	1/1:1,3:4:6.02:74,6,0	1/1:3,1:4:3:27,3,0	1/1:0,4:4:6.02:74,6,0	1/1:0,2:2:6.02:74,6,0	1/1:0,7:7:21.02:241,21,0	1/1:0,3:3:3.01:37,3,0	1/1:0,2:2:3.01:37,3,0
chr10	24729581	.	TG	T	10482.28	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=9.193;DP=580;FS=9.934;HRun=9;HaplotypeScore=140.7651;InbreedingCoeff=0.9281;MQ=85.80;MQ0=10;MQRankSum=-5.955;QD=21.18;ReadPosRankSum=7.495;VQSLOD=3.3598;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,30:30:77.94:704,78,0	1/1:2,2:3:5.98:55,6,0	0/0:26,0:28:47.55:0,48,565	0/0:24,0:24:41.18:0,41,583	1/1:1,18:19:51.01:467,51,0	1/1:2,24:24:68.95:621,69,0	1/1:4,18:22:50.86:447,51,0	0/0:33,0:33:75.57:0,76,411	1/1:2,16:17:44.99:412,45,0	1/1:4,23:28:71.83:635,72,0	1/1:0,13:12:27.01:247,27,0	1/1:4,15:18:44.89:401,45,0	1/1:1,20:19:50.94:456,51,0	1/1:4,25:28:71.98:654,72,0	1/1:1,20:21:56.95:511,57,0	1/1:6,12:14:29.88:264,30,0	1/1:2,17:19:50.96:458,51,0	1/1:4,14:19:30.09:388,30,0	1/1:8,10:17:32.78:289,33,0	1/1:3,10:14:29.98:271,30,0	1/1:7,19:25:53.54:475,54,0	1/1:4,14:18:35.96:329,36,0	1/1:4,19:23:56.97:515,57,0	1/1:3,18:20:54.01:494,54,0	1/1:0,15:15:42.02:384,42,0	1/1:3,15:18:44.95:411,45,0	1/1:10,19:29:59.82:538,60,0	1/1:0,4:2:6:55,6,0
chr10	24729647	.	AC	A	3230.05	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=5.542;DP=570;FS=8.906;HRun=2;HaplotypeScore=82.0401;InbreedingCoeff=0.9962;MQ=61.09;MQ0=10;MQRankSum=-2.902;QD=32.96;ReadPosRankSum=0.910;VQSLOD=3.3195;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:33:87.25:0,87,1279	0/0:14,0:13:39.13:0,39,584	0/0:27,0:23:69.23:0,69,1006	0/0:17,0:16:42.14:0,42,623	0/0:20,0:20:60.18:0,60,858	0/0:26,0:24:72.24:0,72,1070	0/0:17,0:17:48.15:0,48,698	0/0:29,0:29:87.28:0,87,1284	0/0:20,0:19:57.19:0,57,854	0/0:25,0:25:72.23:0,72,1058	0/0:12,0:12:36.12:0,36,538	0/0:18,0:17:51.17:0,51,764	0/0:15,0:13:39.09:0,39,559	0/0:22,0:21:63.21:0,63,944	0/0:20,0:20:60.20:0,60,899	0/0:17,0:13:39.13:0,39,585	1/1:1,19:20:48.03:609,48,0	1/1:1,14:15:45.13:569,45,0	1/1:1,21:21:63.20:817,63,0	1/1:2,14:16:45.12:555,45,0	1/1:1,24:24:66.21:857,66,0	0/0:14,0:14:39.12:0,39,563	0/0:25,0:25:75.24:0,75,1102	0/0:25,0:24:60.20:0,60,899	0/0:19,0:19:54.18:0,54,809	0/0:19,0:19:54.17:0,54,791	0/0:26,0:25:75.25:0,75,1122	0/0:9,0:7:15.05:0,15,225
chr10	24731733	.	A	AGT	6600.52	PASS	AB=0.639;AC=40;AF=0.714;AN=56;BaseQRankSum=0.117;DP=719;FS=7.745;HRun=0;HaplotypeScore=111.3904;InbreedingCoeff=0.1938;MQ=49.00;MQ0=29;MQRankSum=1.129;QD=11.36;ReadPosRankSum=1.980;VQSLOD=4.0789;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:31:57.59:0,58,667	0/1:8,4:11:2.24:108,0,2	0/0:26,0:7:2.84:0,3,15	0/0:48,0:9:9.75:0,10,53	0/1:6,22:28:15.25:271,0,15	1/1:6,15:19:10.85:151,11,0	0/1:15,24:38:48.97:268,0,49	0/0:31,0:30:24.18:0,24,295	1/1:7,8:13:10.36:199,10,0	1/1:20,11:28:51.97:752,52,0	0/1:3,9:12:27.44:88,0,27	1/1:6,17:21:18.06:293,18,0	0/1:12,13:25:50.73:163,0,51	1/1:20,5:24:19.92:376,20,0	1/1:3,24:28:12.04:195,12,0	1/1:18,2:20:7.95:267,8,0	1/1:25,6:30:38.91:545,39,0	0/1:9,12:22:21.61:179,0,22	0/1:14,13:25:29.39:468,0,29	1/1:23,7:30:35.02:523,35,0	1/1:27,8:30:21.07:324,21,0	1/1:6,9:16:6.02:97,6,0	1/1:15,2:17:17.71:240,18,0	1/1:9,16:24:3.01:49,3,0	1/1:9,9:17:3.01:49,3,0	1/1:9,18:27:12.05:615,12,0	0/1:16,16:31:27.94:89,0,28	1/1:4,12:16:18.06:292,18,0
chr10	24731763	.	A	AGTGAGT	3591.89	PASS	AB=0.952;AC=43;AF=0.796;AN=54;BaseQRankSum=0.109;DP=637;FS=7.990;HRun=0;HaplotypeScore=147.9490;InbreedingCoeff=0.0164;MQ=43.82;MQ0=36;MQRankSum=3.309;QD=6.07;ReadPosRankSum=0.258;VQSLOD=1.9171;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:35,0:35:99:139,0,354	0/1:12,0:11:23.06:47,0,23	0/0:5,0:2:0.89:0,1,2	./.	1/1:21,0:21:2.98:129,3,0	1/1:22,0:20:14.43:161,14,0	1/1:36,0:32:14.14:219,14,0	0/0:31,0:26:9.45:0,9,138	1/1:15,0:14:11.45:183,11,0	1/1:23,0:20:8.57:241,9,0	1/1:12,0:11:16.93:164,17,0	1/1:29,0:27:28.57:241,29,0	1/1:26,0:27:15.25:214,15,0	1/1:13,10:22:2.18:90,2,0	1/1:27,0:27:12.95:105,13,0	0/1:10,7:20:13.91:126,0,14	0/1:31,0:31:24.92:165,0,25	0/1:19,0:18:17.81:98,0,18	1/1:24,0:21:7.54:218,8,0	1/1:29,0:29:9:132,9,0	0/1:42,0:38:45.63:62,0,46	1/1:15,0:13:4.89:50,5,0	1/1:9,5:18:11.51:134,12,0	1/1:28,0:25:6.86:45,7,0	1/1:16,0:15:6.01:34,6,0	1/1:25,0:24:34.65:393,35,0	0/1:25,0:23:0.04:76,0,0	1/1:9,0:9:14.98:125,15,0
chr10	24731765	.	T	TGA	2909.61	PASS	AB=0.979;AC=30;AF=0.556;AN=54;BaseQRankSum=-2.692;DP=632;FS=0.000;HRun=0;HaplotypeScore=130.8178;InbreedingCoeff=-0.3818;MQ=43.39;MQ0=36;MQRankSum=4.980;QD=5.19;ReadPosRankSum=1.570;VQSLOD=2.7963;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:36,0:35:99:135,0,176	0/1:12,0:11:19.65:20,0,38	0/0:4,0:2:2.74:0,3,12	./.	0/1:21,0:20:27.02:102,0,27	1/1:22,0:20:9.65:83,10,0	0/1:38,0:34:27.91:151,0,28	0/0:31,0:26:52.82:0,53,256	0/1:14,0:13:11.69:89,0,12	0/1:23,0:20:32.08:189,0,32	1/1:12,0:11:2.61:56,3,0	0/1:30,0:28:89.72:126,0,90	0/1:28,0:27:16.81:96,0,17	0/1:24,0:22:16:51,0,16	0/1:27,0:27:38.84:55,0,39	0/1:20,0:20:42.33:82,0,42	1/1:17,13:30:32.70:385,33,0	0/1:18,1:18:5.20:167,0,5	1/1:26,0:22:14.31:344,14,0	1/1:13,13:28:29.58:359,30,0	0/1:21,19:37:29.88:152,0,30	0/1:16,0:14:33.78:40,0,34	0/1:17,0:16:9.47:24,0,9	0/0:30,0:26:8.76:0,9,58	0/1:19,0:17:8.11:8,0,37	0/1:25,0:24:57.25:183,0,57	0/1:24,0:22:34.70:50,0,35	1/1:8,0:8:14.98:125,15,0
chr10	24731956	.	GC	G	13017.18	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=8.435;DP=608;FS=3.618;HRun=1;HaplotypeScore=94.9020;InbreedingCoeff=0.9943;MQ=70.08;MQ0=1;MQRankSum=-0.959;QD=35.57;ReadPosRankSum=6.069;VQSLOD=4.7273;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,120,1892	1/1:0,12:12:36.12:503,36,0	0/0:30,0:26:75.14:0,75,1109	0/0:32,0:31:83.44:0,83,1198	1/1:0,22:22:60.13:815,60,0	1/1:0,22:22:54.18:755,54,0	1/1:0,29:29:75.25:1049,75,0	0/0:32,0:32:96.32:0,96,1511	1/1:0,34:34:90.22:1232,90,0	1/1:1,9:10:27.09:377,27,0	1/1:0,14:14:42.14:587,42,0	1/1:0,22:22:57.19:796,57,0	1/1:0,21:21:45.15:629,45,0	1/1:0,26:26:69.23:964,69,0	1/1:0,20:20:45.15:629,45,0	1/1:0,11:11:21.07:293,21,0	0/0:31,0:31:93.27:0,93,1436	0/0:12,0:12:36.12:0,36,574	0/0:19,0:18:51.15:0,51,778	0/0:20,0:20:60.19:0,60,933	0/0:26,0:26:78.27:0,78,1244	1/1:0,17:17:48.16:671,48,0	1/1:0,19:19:48.16:671,48,0	1/1:0,22:22:57.19:797,57,0	1/1:0,18:18:39.13:545,39,0	1/1:0,17:17:51.16:697,51,0	1/1:0,26:26:60.20:838,60,0	1/1:0,4:4:12.04:168,12,0
chr10	24732085	.	G	GT	16679.42	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-14.830;DP=604;FS=11.296;HRun=1;HaplotypeScore=53.4911;InbreedingCoeff=0.9974;MQ=80.40;MQ0=0;MQRankSum=-3.222;QD=41.59;ReadPosRankSum=4.234;VQSLOD=4.4233;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:72.23:0,72,934	1/1:1,5:6:15.05:225,15,0	0/0:17,0:17:51.16:0,51,657	0/0:13,0:13:29.61:0,30,388	1/1:0,19:19:48.16:719,48,0	1/1:0,28:28:72.24:1079,72,0	1/1:0,14:14:42.14:630,42,0	0/0:36,0:36:96.31:0,96,1246	1/1:0,28:28:81.27:1214,81,0	1/1:2,26:28:82.83:1208,83,0	1/1:0,20:20:60.20:899,60,0	1/1:0,17:17:48.16:720,48,0	1/1:1,21:22:63.21:944,63,0	1/1:0,27:27:78.26:1169,78,0	1/1:0,19:19:54.18:810,54,0	1/1:1,20:21:57.19:854,57,0	0/0:18,0:18:51.17:0,51,661	0/0:18,0:18:51.17:0,51,660	0/0:27,0:27:78.22:0,78,983	0/0:33,0:33:90.29:0,90,1168	0/0:17,0:17:51.15:0,51,647	1/1:2,27:29:66.18:954,66,0	1/1:1,21:22:57.19:854,57,0	1/1:0,17:17:45.15:675,45,0	1/1:0,17:17:51.17:764,51,0	1/1:0,25:25:75.25:1120,75,0	1/1:0,27:26:81.27:1214,81,0	1/1:1,14:15:42.10:629,42,0
chr10	24733760	.	CTG	C	8351.68	PASS	AB=0.986;AC=42;AF=0.750;AN=56;BaseQRankSum=9.017;DP=567;FS=20.686;HRun=0;HaplotypeScore=71.7400;InbreedingCoeff=0.8584;MQ=65.63;MQ0=7;MQRankSum=3.954;QD=20.67;ReadPosRankSum=2.444;VQSLOD=3.4672;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,19:24:33.10:398,33,0	1/1:1,3:4:9.03:109,9,0	0/1:34,1:21:2.88:3,0,384	0/0:31,0:20:23.97:0,24,400	1/1:3,33:35:84.14:970,84,0	1/1:3,20:24:56.85:631,57,0	1/1:2,14:15:24.03:275,24,0	0/0:22,0:22:30.10:0,30,453	1/1:2,10:11:24.07:291,24,0	1/1:2,16:18:48.12:560,48,0	1/1:9,11:21:53.97:610,54,0	1/1:3,11:14:24.07:289,24,0	1/1:3,17:20:42.06:491,42,0	1/1:1,13:14:30.05:347,30,0	1/1:4,9:13:21.06:255,21,0	1/1:4,13:17:27.08:328,27,0	0/0:35,0:34:72.22:0,72,1126	0/0:21,0:21:50.09:0,50,790	0/1:17,0:17:3.15:3,0,439	0/0:21,0:21:57.19:0,57,910	0/0:33,0:33:81.22:0,81,1229	1/1:3,9:12:21.06:255,21,0	1/1:1,20:21:48.15:582,48,0	1/1:3,12:15:24.07:291,24,0	1/1:8,21:29:47.98:582,48,0	1/1:6,12:17:25.12:377,25,0	1/1:0,18:19:47.98:560,48,0	1/1:0,4:4:12.04:146,12,0
chr10	24733880	.	G	GA	1962.52	PASS	AB=0.776;AC=37;AF=0.661;AN=56;BaseQRankSum=-3.503;DP=358;FS=3.861;HRun=11;HaplotypeScore=59.6042;InbreedingCoeff=0.4016;MQ=37.30;MQ0=36;MQRankSum=2.579;QD=7.76;ReadPosRankSum=0.283;VQSLOD=2.0485;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:14:7.43:0,7,21	1/1:1,5:5:15.03:152,15,0	0/0:13,0:2:2.92:0,3,19	0/0:13,0:2:1.55:0,2,4	1/1:7,4:11:15.38:128,15,0	1/1:11,5:14:20.92:182,21,0	1/1:7,0:6:5.84:39,6,0	0/0:9,0:18:12.54:0,13,91	1/1:9,3:10:8.98:81,9,0	1/1:12,10:21:4.57:337,5,0	0/1:8,4:11:8.20:107,0,8	1/1:8,3:10:8.98:81,9,0	1/1:4,7:11:3.48:31,3,0	1/1:8,2:9:6.01:61,6,0	0/1:4,2:4:0:0,0,0	1/1:2,9:10:21.04:213,21,0	0/0:22,0:15:1.46:0,1,6	0/1:13,0:10:2.99:3,0,18	0/0:6,0:4:4.41:0,4,15	0/0:11,0:7:5.97:0,6,19	1/1:13,0:8:0.13:9,0,0	1/1:4,6:10:12.50:123,12,0	1/1:15,2:15:7.26:64,7,0	1/1:7,2:5:3.01:30,3,0	0/1:14,7:21:20.05:140,0,20	0/1:5,7:12:0.96:107,0,1	1/1:12,3:12:14.96:132,15,0	1/1:5,3:5:11.92:99,12,0
chr10	24733890	.	A	ATG	677.60	PASS	AB=0.885;AC=9;AF=0.161;AN=56;BaseQRankSum=-3.213;DP=430;FS=0.873;HRun=0;HaplotypeScore=97.8260;InbreedingCoeff=0.6399;MQ=37.62;MQ0=45;MQRankSum=-0.120;QD=10.42;ReadPosRankSum=3.252;VQSLOD=3.1059;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:15:17.84:0,18,139	0/0:5,0:5:15.02:0,15,154	0/0:31,0:4:9.03:0,9,115	0/0:25,0:3:3.55:0,4,34	0/0:18,0:17:36.55:0,37,367	0/0:18,0:16:33.81:0,34,307	0/0:9,0:8:10.02:0,10,64	0/0:25,0:20:53.40:0,53,451	0/0:15,0:13:23.77:0,24,208	0/0:25,0:24:56.35:0,56,612	0/0:11,0:10:29.74:0,30,297	0/0:12,0:11:20.94:0,21,199	0/0:14,0:12:11.91:0,12,96	0/0:12,0:11:20.95:0,21,206	0/0:6,0:4:8.62:0,9,57	0/0:12,0:10:24.02:0,24,260	0/1:20,3:13:9.05:147,0,9	1/1:11,2:10:1.62:60,2,0	1/1:4,6:8:3.50:260,3,0	1/1:7,3:6:8.93:159,9,0	1/1:5,4:5:12.02:189,12,0	0/0:11,0:11:21.84:0,22,213	0/0:17,0:15:26.96:0,27,300	0/0:11,0:6:5.81:0,6,49	0/0:24,0:24:46.92:0,47,458	0/0:16,0:14:34.15:0,34,340	0/0:19,0:16:41.72:0,42,389	0/0:10,0:7:17.92:0,18,159
chr10	24733946	.	C	CAG	440.40	PASS	AB=0.737;AC=8;AF=0.143;AN=56;BaseQRankSum=3.816;DP=486;FS=6.254;HRun=0;HaplotypeScore=112.9491;InbreedingCoeff=0.1824;MQ=56.71;MQ0=17;MQRankSum=-1.295;QD=5.65;ReadPosRankSum=-2.310;VQSLOD=2.2992;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:18:0.92:2,1,0	0/0:4,0:4:6.02:0,6,71	0/0:41,0:9:9.96:0,10,137	0/0:48,0:15:11.81:0,12,162	0/0:25,0:25:35.53:0,36,399	0/0:19,0:18:23.59:0,24,243	0/0:9,0:9:6.02:0,6,69	0/0:25,0:23:21.05:0,21,238	0/0:14,0:13:15.02:0,15,170	0/0:30,0:29:17.98:0,18,515	0/0:15,0:15:24.92:0,25,274	0/0:14,0:14:21.04:0,21,232	0/0:17,0:13:14.45:0,14,180	0/0:14,0:14:24:0,24,249	0/0:6,0:5:5.72:0,6,70	0/0:13,0:12:30.06:0,30,330	0/1:9,4:10:20.26:174,0,20	1/1:6,0:6:5.49:35,5,0	0/1:10,1:10:23.27:98,0,23	0/1:8,9:19:17.26:214,0,17	0/1:4,5:8:27.02:41,0,27	0/0:16,0:14:30.09:0,30,353	0/0:16,0:16:23.82:0,24,259	0/0:11,0:7:9.03:0,9,106	0/0:17,0:18:20.63:0,21,203	0/0:23,0:20:33.07:0,33,369	0/0:17,0:17:17.75:0,18,211	0/0:11,0:10:7.42:0,7,228
chr10	24734058	.	CATT	C	20985.01	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=7.362;DP=574;FS=21.206;HRun=0;HaplotypeScore=122.4362;InbreedingCoeff=0.9974;MQ=73.87;MQ0=0;MQRankSum=-5.082;QD=41.07;ReadPosRankSum=8.872;VQSLOD=3.3732;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:1,23:24:51.17:868,51,0	1/1:0,8:8:21.07:358,21,0	0/0:16,0:16:48.05:0,48,917	0/0:11,0:11:33.02:0,33,614	1/1:0,41:41:99:1686,99,0	1/1:2,25:26:60.21:1021,60,0	1/1:1,11:12:27.09:460,27,0	0/0:36,0:36:99:0,108,2428	1/1:0,20:20:51.17:868,51,0	1/1:1,25:26:75.26:1277,75,0	1/1:0,27:27:69.24:1176,69,0	1/1:1,16:17:36.12:613,36,0	1/1:0,28:28:60.21:1019,60,0	1/1:1,18:19:48.16:816,48,0	1/1:1,20:20:54.18:920,54,0	1/1:0,13:13:30.10:511,30,0	1/1:0,15:15:36.09:613,36,0	1/1:1,13:14:33.08:532,33,0	1/1:0,12:12:33.11:562,33,0	1/1:1,31:32:78.27:1329,78,0	1/1:0,17:17:39.13:665,39,0	1/1:0,20:20:54.18:920,54,0	1/1:1,23:24:48.16:816,48,0	1/1:0,13:13:33.58:563,34,0	1/1:1,30:31:72.25:1226,72,0	1/1:0,21:20:57.15:940,57,0	1/1:0,14:14:39.13:664,39,0	1/1:0,15:15:33.11:562,33,0
chr10	24734341	.	A	AT	19248.12	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-8.306;DP=626;FS=1.105;HRun=5;HaplotypeScore=55.3528;InbreedingCoeff=0.9743;MQ=72.99;MQ0=0;MQRankSum=-4.064;QD=34.13;ReadPosRankSum=7.283;VQSLOD=3.9090;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,12:12:30.10:395,30,0	1/1:0,6:6:18.06:237,18,0	0/0:10,0:10:26.98:0,27,274	0/0:12,0:12:12:0,12,197	1/1:3,35:38:93.23:1202,93,0	1/1:3,30:33:81.26:1066,81,0	1/1:1,17:18:51.17:671,51,0	0/0:40,0:40:99:0,114,1207	1/1:2,21:23:51.17:671,51,0	1/1:1,27:28:81.25:1047,81,0	1/1:3,28:32:78.21:996,78,0	1/1:0,12:12:36.12:474,36,0	1/1:2,21:23:60.20:790,60,0	1/1:4,26:30:72.23:947,72,0	1/1:0,20:20:57.19:750,57,0	1/1:2,27:29:75.24:986,75,0	1/1:1,19:20:51.17:671,51,0	1/1:1,13:14:33.11:434,33,0	1/1:0,18:18:51.15:655,51,0	1/1:3,35:38:96.23:1223,96,0	1/1:2,14:16:33.11:434,33,0	1/1:0,23:22:66.21:868,66,0	1/1:1,27:28:69.22:908,69,0	1/1:1,19:20:54.18:711,54,0	1/1:0,19:19:57.19:750,57,0	1/1:2,24:26:72.23:946,72,0	1/1:2,32:33:96.31:1259,96,0	1/1:0,4:4:12.04:158,12,0
chr10	24735553	.	T	TTCTC	29053.35	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=3.016;DP=482;FS=23.272;HRun=0;HaplotypeScore=116.4398;InbreedingCoeff=0.9412;MQ=38.79;MQ0=7;MQRankSum=-7.404;QD=70.18;ReadPosRankSum=4.379;VQSLOD=4.6403;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,19:28:63.22:1609,63,0	1/1:1,3:4:9.03:251,9,0	0/0:25,0:18:42.14:0,42,815	0/0:24,0:20:60.20:0,60,1131	1/1:3,16:19:54.19:1368,54,0	1/1:4,21:25:72.25:1978,72,0	1/1:4,19:23:66.23:1721,66,0	0/0:19,0:19:54.18:0,54,1040	1/1:10,9:19:45.14:1076,45,0	1/1:1,16:17:51.13:1359,51,0	1/1:7,9:15:42.13:952,42,0	1/1:2,25:27:81.28:2233,81,0	1/1:3,14:17:51.17:1376,51,0	1/1:4,11:16:39.13:1032,39,0	1/1:3,16:18:48.16:1292,48,0	1/1:5,13:18:54.17:1307,54,0	1/1:6,10:16:39.13:1051,39,0	1/1:6,8:14:36.12:889,36,0	1/1:4,6:8:21.07:532,21,0	1/1:0,14:14:42.14:1169,42,0	1/1:3,7:10:27.09:714,27,0	1/1:2,15:16:48.16:1251,48,0	1/1:1,15:16:42.14:1088,42,0	1/1:2,7:9:21.05:523,21,0	1/1:4,7:11:33.11:793,33,0	1/1:6,16:22:66.23:1675,66,0	1/1:3,18:23:63.20:1653,63,0	1/1:2,1:3:6.02:162,6,0
chr10	24735565	.	A	AT	2195.64	PASS	AB=0.969;AC=33;AF=0.589;AN=56;BaseQRankSum=9.546;DP=469;FS=2.906;HRun=0;HaplotypeScore=168.2162;InbreedingCoeff=0.0518;MQ=43.14;MQ0=3;MQRankSum=-9.401;QD=6.07;ReadPosRankSum=11.374;VQSLOD=1.7982;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:47.22:0,47,369	0/1:4,0:4:0.92:1,0,28	0/0:30,0:23:60.09:0,60,765	0/0:26,0:23:53.84:0,54,730	0/1:15,0:15:6.24:35,0,6	0/1:28,0:28:23.74:24,0,171	0/1:20,0:21:20.11:20,0,119	0/0:26,0:26:69.21:0,69,944	0/1:15,0:15:8.04:28,0,8	0/1:14,0:14:4.18:58,0,4	1/1:11,0:10:1.21:30,1,0	0/1:28,0:28:41.81:77,0,42	1/1:16,0:16:23.53:103,24,0	1/1:15,0:15:20.63:79,21,0	0/1:20,0:19:17.60:47,0,18	0/1:15,0:15:17.12:48,0,17	1/1:5,14:19:37.99:468,38,0	0/1:5,10:15:3.19:245,0,3	1/1:3,6:5:9.03:109,9,0	1/1:3,9:12:24.07:293,24,0	1/1:2,14:16:39.12:474,39,0	1/1:18,0:18:15.62:82,16,0	1/1:12,0:12:6.73:27,7,0	0/1:10,0:10:7.92:8,0,30	1/1:8,0:8:4.17:26,4,0	0/1:21,0:21:43.71:44,0,80	0/1:20,0:20:42.02:42,0,78	0/0:5,0:5:0.55:0,1,2
chr10	24735566	.	C	CG	10284.21	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=7.979;DP=475;FS=11.834;HRun=6;HaplotypeScore=141.5885;InbreedingCoeff=0.8987;MQ=44.12;MQ0=2;MQRankSum=-7.776;QD=26.44;ReadPosRankSum=5.438;VQSLOD=3.1025;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,1:23:25.03:147,25,0	1/1:3,1:4:6.02:74,6,0	0/0:32,0:25:48.06:0,48,542	0/0:26,0:23:58.63:0,59,548	1/1:3,12:15:36.09:436,36,0	1/1:7,21:28:57.18:708,57,0	1/1:6,14:20:35.03:480,35,0	0/0:28,0:28:62.25:0,62,641	1/1:1,12:14:41.96:500,42,0	1/1:0,13:13:36.12:452,36,0	1/1:1,11:12:23.82:301,24,0	1/1:4,24:28:66.21:826,66,0	1/1:0,15:15:42.13:520,42,0	1/1:2,15:17:42.13:527,42,0	1/1:1,18:19:48.15:603,48,0	1/1:1,14:15:39.12:488,39,0	1/1:19,0:19:39.12:487,39,0	1/1:15,0:16:17.13:270,17,0	1/1:9,0:5:9.03:112,9,0	1/1:12,0:12:24.08:300,24,0	1/1:17,0:17:45.12:537,45,0	1/1:3,15:18:42.13:524,42,0	1/1:3,8:11:21.07:264,21,0	1/1:3,7:10:15.03:188,15,0	1/1:2,6:8:21.06:257,21,0	1/1:4,16:20:48.15:603,48,0	1/1:4,15:19:48.15:603,48,0	1/1:1,5:6:6.02:75,6,0
chr10	24735709	.	TTTTG	T	6912.16	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=3.905;DP=349;FS=69.974;HRun=0;HaplotypeScore=75.5834;InbreedingCoeff=0.8106;MQ=59.77;MQ0=4;MQRankSum=-0.088;QD=25.79;ReadPosRankSum=5.007;VQSLOD=2.0741;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,11:18:36.12:576,36,0	1/1:4,5:9:15.05:244,15,0	0/0:19,0:16:12.04:0,12,253	0/0:19,0:13:14.17:0,14,292	1/1:6,8:14:32.92:399,33,0	1/1:7,4:11:21.06:311,21,0	1/1:4,4:8:7.78:115,8,0	0/0:25,0:25:39.08:0,39,846	1/1:3,6:9:21.06:318,21,0	1/1:2,9:10:27.06:411,27,0	1/1:2,7:9:20.99:284,21,0	1/1:3,9:12:30.03:446,30,0	1/1:3,7:10:12.04:195,12,0	1/1:1,4:5:15.05:231,15,0	1/1:8,6:14:18.06:293,18,0	1/1:5,6:11:18.06:282,18,0	1/1:7,0:11:11.86:111,12,0	1/1:12,0:14:8.62:57,9,0	1/1:7,0:9:3:28,3,0	1/1:1,0:6:14.51:121,15,0	0/0:17,0:18:2.95:0,3,20	1/1:6,7:13:21.07:342,21,0	1/1:4,5:9:18.06:287,18,0	1/1:7,10:17:27.04:410,27,0	1/1:3,10:13:36.06:510,36,0	1/1:8,6:14:21.04:314,21,0	1/1:7,5:12:27.03:385,27,0	1/1:1,5:6:15.05:244,15,0
chr10	24735772	.	AT	A	4443.71	PASS	AB=0.741;AC=50;AF=0.893;AN=56;BaseQRankSum=3.891;DP=254;FS=29.491;HRun=10;HaplotypeScore=53.0179;InbreedingCoeff=0.5168;MQ=64.66;MQ0=2;MQRankSum=-3.332;QD=19.93;ReadPosRankSum=6.490;VQSLOD=3.4386;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,10:12:26.98:234,27,0	1/1:2,2:4:8.97:73,9,0	0/1:13,2:10:22.05:22,0,145	0/0:13,0:8:17.71:0,18,153	1/1:1,11:12:26.99:234,27,0	1/1:0,4:4:12:104,12,0	1/1:0,7:7:21:182,21,0	0/0:17,1:18:19.07:0,19,438	1/1:1,5:6:15:130,15,0	1/1:1,13:12:32.99:286,33,0	1/1:2,5:7:11.98:104,12,0	1/1:0,10:10:29.99:260,30,0	1/1:0,7:7:21:182,21,0	1/1:0,5:5:15:130,15,0	1/1:1,12:13:35.99:312,36,0	1/1:1,4:5:11.99:104,12,0	1/1:1,8:9:23.99:208,24,0	1/1:1,3:4:0.19:67,0,0	1/1:2,6:8:17.95:149,18,0	1/1:2,4:6:14.99:128,15,0	1/1:0,9:9:26.99:234,27,0	1/1:2,5:7:17.98:153,18,0	1/1:1,6:6:15:130,15,0	1/1:2,12:14:29.88:260,30,0	1/1:2,14:16:41.99:364,42,0	1/1:1,4:5:11.99:104,12,0	0/1:4,8:12:6.19:181,0,6	1/1:1,4:5:12:104,12,0
chr10	24736888	.	TTG	T	1276.49	PASS	AB=0.928;AC=35;AF=0.729;AN=48;BaseQRankSum=-0.899;DP=420;FS=9.841;HRun=0;HaplotypeScore=167.1790;InbreedingCoeff=0.4400;MQ=44.68;MQ0=16;MQRankSum=-0.890;QD=4.62;ReadPosRankSum=-1.437;VQSLOD=2.3199;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:18:0,18,172	1/1:8,5:13:9.02:97,9,0	./.	./.	1/1:15,2:18:2.83:14,3,0	0/1:14,1:15:11.96:69,0,12	0/1:18,2:22:23.69:116,0,24	./.	1/1:7,3:10:3.01:32,3,0	1/1:12,7:18:15:140,15,0	1/1:12,8:19:11.95:114,12,0	1/1:4,3:8:3.01:32,3,0	1/1:5,10:14:9.02:97,9,0	1/1:13,1:13:3.01:32,3,0	1/1:5,9:14:3.01:32,3,0	1/1:9,9:18:12.03:129,12,0	0/0:13,0:17:11.93:0,12,91	0/0:12,0:14:23.90:0,24,220	0/0:13,0:12:5.95:0,6,42	0/1:13,0:13:5.91:6,0,51	0/0:20,0:19:17.70:0,18,177	1/1:10,0:10:2.99:24,3,0	./.	1/1:14,4:18:15:145,15,0	1/1:6,1:8:5.85:46,6,0	1/1:13,8:22:11.61:102,12,0	1/1:6,8:14:15.04:161,15,0	1/1:3,0:3:5.98:47,6,0
chr10	24737214	.	AAGAAGT	A	32907.80	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=10.556;DP=621;FS=5.029;HRun=0;HaplotypeScore=195.4579;InbreedingCoeff=0.9436;MQ=75.50;MQ0=0;MQRankSum=-13.554;QD=60.60;ReadPosRankSum=7.045;VQSLOD=4.5241;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,18:18:48.16:1180,48,0	1/1:0,15:15:36.12:886,36,0	0/0:23,0:23:60.21:0,60,1988	0/0:22,0:22:60.20:0,60,1830	1/1:1,32:33:72.12:1659,72,0	1/1:3,31:34:81.28:1992,81,0	1/1:3,19:22:45.15:1106,45,0	0/0:33,0:33:99:0,99,3231	1/1:4,20:24:48.16:1181,48,0	1/1:1,31:32:93.32:2283,93,0	1/1:1,23:24:57.20:1399,57,0	1/1:0,24:24:63.18:1496,63,0	1/1:3,22:25:63.22:1550,63,0	1/1:3,25:28:72.25:1770,72,0	1/1:4,31:35:90.31:2213,90,0	1/1:1,27:28:78.27:1918,78,0	1/1:4,9:13:23.70:590,24,0	1/1:0,7:7:15.05:369,15,0	1/1:4,15:19:48.15:1131,48,0	1/1:0,21:21:63.18:1496,63,0	1/1:1,4:5:9.03:221,9,0	1/1:0,15:15:42.14:1032,42,0	1/1:3,25:28:72.25:1770,72,0	1/1:2,6:8:12.04:295,12,0	1/1:0,13:13:36.12:885,36,0	1/1:4,25:29:75.22:1735,75,0	1/1:1,38:40:99:2529,105,0	1/1:0,3:3:9.03:221,9,0
chr10	24738202	.	ATCC	A	19254.89	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=6.300;DP=574;FS=2.367;HRun=0;HaplotypeScore=111.3506;InbreedingCoeff=0.9973;MQ=64.25;MQ0=0;MQRankSum=-5.357;QD=50.14;ReadPosRankSum=4.245;VQSLOD=7.3025;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:87.30:0,87,2114	1/1:0,10:10:27.09:503,27,0	0/0:22,0:19:54.06:0,54,1183	0/0:20,0:18:51.18:0,51,1236	1/1:1,23:24:60.20:1074,60,0	1/1:0,19:19:51.17:950,51,0	1/1:0,18:18:51.17:950,51,0	0/0:25,0:25:75.26:0,75,1814	1/1:0,25:25:75.26:1392,75,0	1/1:0,23:23:66.19:1191,66,0	1/1:0,17:17:48.12:858,48,0	1/1:0,13:13:39.13:726,39,0	1/1:0,20:20:60.21:1114,60,0	1/1:0,24:24:63.22:1174,63,0	1/1:0,27:27:75.21:1360,75,0	1/1:0,23:23:60.21:1117,60,0	0/0:12,0:12:36.12:0,36,856	0/0:11,0:11:33.11:0,33,812	0/0:23,0:22:66.23:0,66,1590	0/0:28,0:28:81.28:0,81,1996	0/0:19,0:19:54.19:0,54,1277	1/1:0,18:19:48.16:892,48,0	1/1:0,17:17:36.12:671,36,0	1/1:0,16:16:41.82:781,42,0	1/1:0,16:16:39.09:689,39,0	1/1:0,28:28:84.26:1501,84,0	1/1:0,38:38:99:2032,111,0	1/1:0,7:7:15.05:280,15,0
chr10	24741198	.	AT	A	8558.81	PASS	AB=0.800;AC=54;AF=0.964;AN=56;BaseQRankSum=2.309;DP=460;FS=2.907;HRun=1;HaplotypeScore=239.1724;InbreedingCoeff=-0.0365;MQ=52.40;MQ0=0;MQRankSum=-0.956;QD=18.61;ReadPosRankSum=5.008;VQSLOD=4.9349;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,23:25:60.66:474,61,0	1/1:1,4:5:8.97:71,9,0	1/1:5,0:5:14.38:84,14,0	0/1:8,0:8:18.52:40,0,19	1/1:3,12:15:26.81:209,27,0	1/1:3,13:16:36.31:279,36,0	1/1:4,17:21:47.71:371,48,0	1/1:2,28:30:69.35:604,69,0	1/1:0,21:21:59.80:480,60,0	1/1:3,10:13:18.62:227,19,0	1/1:3,10:13:32.89:266,33,0	1/1:5,19:24:51.76:406,52,0	1/1:0,22:22:62.85:505,63,0	1/1:2,12:14:36.74:283,37,0	1/1:3,18:21:53.88:431,54,0	1/1:2,20:22:39.80:424,40,0	0/1:5,10:15:1.35:205,0,1	1/1:0,6:6:17.91:135,18,0	1/1:4,17:21:18.44:332,18,0	1/1:1,19:20:51.65:394,52,0	1/1:4,10:14:18.27:131,18,0	1/1:3,16:19:50.90:420,51,0	1/1:0,13:13:38.82:313,39,0	1/1:4,13:17:29.86:239,30,0	1/1:2,9:11:26.94:215,27,0	1/1:6,19:25:62.63:472,63,0	1/1:0,22:22:62.79:503,63,0	1/1:0,2:2:5.98:47,6,0
chr10	24742205	.	GA	G	6157.08	PASS	AB=0.972;AC=53;AF=0.946;AN=56;BaseQRankSum=7.045;DP=733;FS=17.935;HRun=1;HaplotypeScore=124.0754;InbreedingCoeff=-0.0791;MQ=78.17;MQ0=0;MQRankSum=-2.161;QD=8.40;ReadPosRankSum=10.227;VQSLOD=-0.2331;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:28:42.43:246,42,0	1/1:7,0:7:19.04:86,19,0	0/1:22,1:23:75.31:75,0,84	0/1:21,1:21:58.62:110,0,59	1/1:35,0:35:43.88:350,44,0	1/1:38,0:38:23.77:302,24,0	1/1:19,0:19:16.93:153,17,0	1/1:27,0:27:25.01:160,25,0	1/1:21,0:21:47.13:224,47,0	1/1:25,0:25:28.07:151,28,0	1/1:32,1:33:60.31:343,60,0	1/1:21,1:22:2.16:192,2,0	1/1:37,0:37:63.81:386,64,0	1/1:28,0:28:36.84:227,37,0	1/1:32,0:32:22.90:255,23,0	1/1:20,0:20:37.19:152,37,0	1/1:22,0:22:28.05:193,28,0	1/1:21,0:21:47.83:243,48,0	1/1:23,0:23:1.52:129,2,0	1/1:34,1:35:42.97:373,43,0	1/1:19,0:19:37.50:161,37,0	1/1:33,0:33:10.88:275,11,0	1/1:32,0:32:51.55:300,52,0	1/1:14,0:14:6.40:97,6,0	1/1:32,0:32:23.72:234,24,0	1/1:38,0:38:90.11:332,90,0	0/1:27,0:27:26.69:187,0,27	1/1:20,0:20:49.04:219,49,0
chr10	24743211	.	GA	G	8534.21	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=7.980;DP=497;FS=10.039;HRun=9;HaplotypeScore=79.9334;InbreedingCoeff=0.9863;MQ=74.71;MQ0=0;MQRankSum=1.690;QD=24.31;ReadPosRankSum=4.505;VQSLOD=5.0768;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:17:41.94:0,42,455	1/1:1,8:9:21.01:192,21,0	0/0:12,0:12:12.02:0,12,127	0/0:8,0:8:11.85:0,12,106	1/1:1,24:25:66.02:603,66,0	1/1:0,12:12:36.02:330,36,0	1/1:2,6:8:15:137,15,0	0/0:18,0:18:45.11:0,45,503	1/1:0,14:14:36.02:330,36,0	1/1:2,22:24:34.40:564,34,0	1/1:1,23:24:63.03:577,63,0	1/1:1,18:19:54.03:494,54,0	1/1:1,15:16:29.83:394,30,0	1/1:1,18:19:48.03:439,48,0	1/1:0,14:14:39.02:357,39,0	1/1:3,15:18:39.02:357,39,0	0/0:22,0:22:57.12:0,57,634	0/0:16,0:16:36.11:0,36,414	0/0:22,1:23:35.72:0,36,664	0/0:21,0:21:60.17:0,60,682	0/0:9,0:9:24.07:0,24,277	1/1:0,15:15:39.01:356,39,0	1/1:0,15:15:45.02:411,45,0	1/1:1,13:14:33.02:302,33,0	1/1:1,34:35:99:906,99,0	1/1:0,21:21:63.03:577,63,0	1/1:2,33:35:96.05:879,96,0	1/1:2,12:14:36.01:329,36,0
chr10	24744101	.	TA	T	6171.27	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=6.490;DP=490;FS=0.966;HRun=11;HaplotypeScore=60.8364;InbreedingCoeff=0.9113;MQ=72.91;MQ0=1;MQRankSum=-2.219;QD=17.34;ReadPosRankSum=3.391;VQSLOD=5.7801;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,0:24:36.66:106,37,0	1/1:2,4:6:5.98:49,6,0	0/0:21,1:14:8.27:0,8,111	0/0:18,1:13:10.83:0,11,63	1/1:5,22:27:65.85:540,66,0	1/1:2,15:17:41.94:345,42,0	1/1:2,15:17:38.95:320,39,0	1/1:6,17:23:44.75:359,45,0	1/1:1,8:9:11.98:99,12,0	1/1:2,21:23:59.79:491,60,0	1/1:7,16:23:47.92:393,48,0	1/1:0,15:15:44.95:369,45,0	1/1:2,11:13:26.90:222,27,0	1/1:2,16:19:46.98:375,47,0	1/1:1,15:16:41.95:345,42,0	1/1:2,19:21:53.93:443,54,0	0/0:23,0:22:63.13:0,63,661	0/0:20,0:20:54.12:0,54,567	0/0:21,2:23:1.74:0,2,400	0/0:16,0:17:29.94:0,30,296	0/0:10,0:10:27.03:0,27,271	1/1:2,14:16:32.94:271,33,0	1/1:0,14:14:35.96:296,36,0	1/1:3,5:9:14.97:123,15,0	1/1:3,9:12:20.95:172,21,0	1/1:3,14:17:32.89:264,33,0	1/1:7,16:23:47.92:394,48,0	1/1:3,9:12:23.93:197,24,0
chr10	24744524	.	CG	C	12427.14	PASS	AB=0.867;AC=53;AF=0.946;AN=56;BaseQRankSum=3.757;DP=340;FS=18.361;HRun=1;HaplotypeScore=270.5818;InbreedingCoeff=0.6002;MQ=69.01;MQ0=0;MQRankSum=-6.325;QD=37.77;ReadPosRankSum=5.045;VQSLOD=-0.2066;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,10:10:30.10:411,30,0	1/1:0,9:9:27.09:365,27,0	0/0:11,0:10:19.31:0,19,82	0/1:10,2:12:42.81:43,0,75	1/1:0,17:17:48.16:660,48,0	1/1:0,9:9:27.09:371,27,0	1/1:0,10:10:30.10:414,30,0	1/1:0,28:28:72.24:998,72,0	1/1:0,8:8:24.08:323,24,0	1/1:0,19:19:54.18:741,54,0	1/1:0,13:13:39.13:535,39,0	1/1:0,10:10:30.10:414,30,0	1/1:0,13:13:39.13:539,39,0	1/1:0,9:9:27.09:372,27,0	1/1:0,13:13:39.13:531,39,0	1/1:0,10:10:30.10:415,30,0	1/1:0,7:6:12.04:166,12,0	1/1:0,8:8:24.08:329,24,0	1/1:0,10:9:24.08:325,24,0	1/1:0,14:14:42.14:575,42,0	1/1:0,4:4:12.03:154,12,0	1/1:0,17:17:48.16:653,48,0	1/1:0,18:18:54.18:738,54,0	1/1:0,8:8:18.06:247,18,0	1/1:0,16:16:48.16:659,48,0	1/1:0,13:13:39.13:539,39,0	1/1:0,18:18:51.17:705,51,0	1/1:0,5:5:15.05:207,15,0
chr10	24744531	.	ACC	A	11113.68	PASS	AB=1.000;AC=53;AF=0.946;AN=56;BaseQRankSum=5.213;DP=351;FS=11.387;HRun=5;HaplotypeScore=282.0138;InbreedingCoeff=0.7021;MQ=72.21;MQ0=0;MQRankSum=-6.224;QD=32.98;ReadPosRankSum=5.345;VQSLOD=1.1043;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,10:10:30.10:397,30,0	1/1:1,8:9:24.07:328,24,0	0/0:14,0:13:21.62:0,22,251	0/1:13,0:12:3.53:4,0,143	1/1:1,16:17:45.13:602,45,0	1/1:1,9:10:27.09:364,27,0	1/1:3,8:11:24.08:332,24,0	1/1:4,24:28:63.16:872,63,0	1/1:1,7:8:21.06:290,21,0	1/1:1,18:19:51.14:685,51,0	1/1:1,13:14:39.12:519,39,0	1/1:1,9:10:27.08:368,27,0	1/1:3,10:13:30.07:407,30,0	1/1:1,8:9:24.07:327,24,0	1/1:2,11:13:36.03:469,36,0	1/1:1,10:11:30.10:416,30,0	1/1:3,4:6:11.92:123,12,0	1/1:2,6:8:18.85:250,19,0	1/1:3,8:10:24.01:301,24,0	1/1:1,13:14:39.11:526,39,0	1/1:1,4:5:11.99:144,12,0	1/1:4,13:17:39.11:534,39,0	1/1:1,17:18:54.18:733,54,0	1/1:1,7:8:15.05:201,15,0	1/1:1,16:17:48.16:659,48,0	1/1:3,11:14:36.11:479,36,0	1/1:1,17:18:48.15:660,48,0	1/1:2,3:5:9.01:124,9,0
chr10	24744540	.	TC	T	6496.35	PASS	AB=0.828;AC=54;AF=0.964;AN=56;BaseQRankSum=-0.061;DP=462;FS=2.712;HRun=1;HaplotypeScore=292.4446;InbreedingCoeff=-0.0402;MQ=70.24;MQ0=0;MQRankSum=-2.026;QD=14.06;ReadPosRankSum=4.091;VQSLOD=4.6367;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:14:21.62:141,22,0	1/1:10,0:10:26.69:181,27,0	0/1:13,4:16:88.26:104,0,88	0/1:9,2:11:21.78:69,0,22	1/1:22,0:22:48.65:326,49,0	1/1:18,0:18:38.36:249,38,0	1/1:15,0:15:40.70:264,41,0	1/1:36,0:36:47.72:484,48,0	1/1:15,0:15:14.82:171,15,0	1/1:24,0:24:49.74:346,50,0	1/1:21,0:21:42.39:287,42,0	1/1:18,0:18:35.46:234,35,0	1/1:14,0:14:32.59:222,33,0	1/1:12,0:12:26.60:177,27,0	1/1:20,0:20:49.09:330,49,0	1/1:17,0:17:38.54:259,39,0	1/1:8,0:7:20.63:132,21,0	1/1:10,0:10:23.51:148,24,0	1/1:17,0:17:24.35:207,24,0	1/1:19,0:19:45.27:297,45,0	1/1:7,0:7:14.70:92,15,0	1/1:17,0:17:46.85:301,47,0	1/1:22,0:22:54.39:379,54,0	1/1:9,0:9:20.63:134,21,0	1/1:23,0:23:45.30:300,45,0	1/1:18,0:18:49.29:286,49,0	1/1:24,0:24:23.04:295,23,0	1/1:4,0:4:11.87:80,12,0
chr10	24745555	.	T	TA	25663.79	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-7.576;DP=671;FS=6.927;HRun=6;HaplotypeScore=57.8137;InbreedingCoeff=0.9916;MQ=82.36;MQ0=0;MQRankSum=-8.942;QD=40.35;ReadPosRankSum=5.333;VQSLOD=2.5033;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,15:16:39.13:584,39,0	1/1:0,5:5:15.05:225,15,0	0/0:20,0:20:51.16:0,51,660	0/0:15,0:15:42.13:0,42,535	1/1:0,41:41:99:1738,120,0	1/1:1,27:28:63.21:941,63,0	1/1:1,25:26:57.19:854,57,0	1/1:0,36:36:99:1488,105,0	1/1:0,22:22:66.22:988,66,0	1/1:1,36:37:99:1606,103,0	1/1:0,37:37:99:1562,105,0	1/1:0,15:15:39.13:572,39,0	1/1:2,26:28:72.24:1079,72,0	1/1:2,22:24:60.20:899,60,0	1/1:2,21:23:57.19:854,57,0	1/1:1,19:20:54.18:809,54,0	1/1:1,22:23:63.21:944,63,0	1/1:1,12:13:36.07:499,36,0	1/1:0,21:22:66.21:957,66,0	1/1:0,34:34:99:1459,99,0	1/1:1,16:17:36.12:540,36,0	1/1:0,19:19:51.17:764,51,0	1/1:0,30:30:81.26:1202,81,0	1/1:0,15:15:39.13:585,39,0	1/1:0,23:23:66.22:989,66,0	1/1:1,29:30:87.28:1276,87,0	1/1:0,32:32:90.30:1349,90,0	1/1:0,20:20:60.20:899,60,0
chr10	24753862	.	TC	T	8408.10	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-0.597;DP=237;FS=18.884;HRun=3;HaplotypeScore=152.1977;InbreedingCoeff=0.5734;MQ=37.08;MQ0=0;MQRankSum=-2.753;QD=35.93;ReadPosRankSum=2.468;VQSLOD=2.5855;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,8:8:24.07:294,24,0	1/1:0,7:7:21.07:255,21,0	0/0:1,0:1:3.01:0,3,43	0/0:2,0:1:3.01:0,3,36	1/1:0,20:20:54.17:655,54,0	1/1:1,17:18:54.17:666,54,0	1/1:0,5:5:12.04:148,12,0	1/1:0,7:7:21.07:258,21,0	1/1:0,6:6:18.06:222,18,0	1/1:0,12:13:37.36:449,37,0	1/1:0,14:14:39.12:482,39,0	1/1:0,3:3:9.03:111,9,0	1/1:0,5:5:15.05:185,15,0	1/1:0,11:11:33.10:408,33,0	1/1:0,10:10:30.09:367,30,0	1/1:0,6:6:18.06:220,18,0	1/1:0,4:4:12.04:148,12,0	1/1:0,3:3:9.03:111,9,0	1/1:0,10:10:30.09:371,30,0	1/1:0,11:11:33.10:408,33,0	1/1:0,3:3:9.03:111,9,0	1/1:0,5:5:15.05:179,15,0	1/1:0,9:9:27.08:330,27,0	1/1:0,3:3:3.82:67,4,0	1/1:0,14:14:42.13:517,42,0	1/1:0,16:16:48.15:592,48,0	1/1:0,21:21:63.20:779,63,0	1/1:0,2:2:6.02:74,6,0
chr10	24753909	.	G	GTCTGGGATTCCT	31244.92	PASS	AB=0.792;AC=37;AF=0.661;AN=56;BaseQRankSum=2.403;DP=368;FS=91.933;HRun=0;HaplotypeScore=345.8638;InbreedingCoeff=0.9099;MQ=60.13;MQ0=0;MQRankSum=-7.268;QD=128.05;ReadPosRankSum=3.052;VQSLOD=1.7414;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:28.34:0,28,1018	1/1:2,5:7:15.05:928,15,0	0/0:9,0:9:23.97:0,24,870	0/0:14,0:14:39.10:0,39,1205	1/1:8,15:24:52.03:2741,52,0	1/1:13,7:20:53.32:2305,53,0	1/1:6,3:9:21.03:830,21,0	0/0:25,0:25:72.20:0,72,2336	1/1:7,3:10:30.10:1648,30,0	1/1:13,9:23:63.22:3263,63,0	1/1:5,6:11:33.11:1640,33,0	1/1:6,1:7:21.07:844,21,0	1/1:3,3:6:15.05:760,15,0	1/1:13,5:18:53.91:2209,54,0	1/1:6,6:12:32.28:1878,32,0	1/1:5,5:10:23.10:1317,23,0	0/0:6,0:6:18.06:0,18,663	0/0:15,0:15:24.22:0,24,1460	0/0:12,0:12:33.11:0,33,1220	0/0:19,0:19:54.19:0,54,1942	0/0:14,0:14:39.12:0,39,1332	1/1:2,4:6:10.35:738,10,0	1/1:9,6:15:45.11:1997,45,0	1/1:3,2:5:8.99:255,9,0	1/1:10,9:19:54.16:2555,54,0	0/1:14,5:19:4.04:1888,0,4	1/1:12,7:20:60.12:2923,60,0	1/1:1,2:3:9.03:525,9,0
chr10	24754386	.	T	TA	7653.62	PASS	AB=0.772;AC=38;AF=0.679;AN=56;BaseQRankSum=-10.577;DP=534;FS=0.396;HRun=11;HaplotypeScore=68.1139;InbreedingCoeff=0.6643;MQ=68.63;MQ0=0;MQRankSum=-0.706;QD=18.99;ReadPosRankSum=3.236;VQSLOD=5.8421;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:20:42.89:0,43,311	1/1:0,8:8:21.04:213,21,0	0/1:9,0:8:11.70:12,0,41	0/1:14,0:13:22.69:23,0,91	1/1:10,30:40:63.91:821,64,0	1/1:7,11:18:27.05:274,27,0	1/1:1,17:19:53.94:532,54,0	0/0:27,3:30:25.19:0,25,442	1/1:1,17:18:42.08:426,42,0	1/1:5,20:25:51.06:508,51,0	1/1:6,18:25:47.89:460,48,0	0/1:3,8:11:22.43:159,0,22	1/1:2,24:26:42.90:616,43,0	1/1:0,18:18:39.04:385,39,0	1/1:0,7:8:23.88:227,24,0	1/1:4,16:21:47.93:471,48,0	0/0:0,0:18:36.67:0,37,106	0/0:2,0:7:10.18:0,10,29	0/0:9,0:23:29.74:0,30,85	0/0:4,0:25:38.68:0,39,112	0/0:0,0:8:14.26:0,14,41	1/1:5,17:23:50.90:491,51,0	1/1:3,19:24:26.98:421,27,0	1/1:4,10:14:23.45:240,23,0	0/1:4,11:16:7.52:280,0,8	1/1:7,16:23:10.61:457,11,0	1/1:9,24:33:10.77:471,11,0	1/1:1,6:8:17.87:167,18,0
chr10	24756788	.	T	TTCTCTC	1116.88	PASS	AB=1.000;AC=31;AF=0.620;AN=50;BaseQRankSum=1.244;DP=443;FS=8.385;HRun=0;HaplotypeScore=94.8086;InbreedingCoeff=0.4954;MQ=44.96;MQ0=8;MQRankSum=-0.479;QD=4.81;ReadPosRankSum=-2.746;VQSLOD=0.4308;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:3.85:0,4,410	1/1:10,0:10:6.49:114,6,0	0/0:24,0:8:2.40:0,2,31	0/0:31,0:11:1.55:0,2,7	1/1:19,1:19:5.95:68,6,0	./.	1/1:6,2:9:0.47:1,0,0	0/0:28,0:25:7.06:0,7,312	1/1:11,1:12:9.03:153,9,0	1/1:18,0:18:15.09:191,15,0	1/1:15,0:15:5.99:50,6,0	1/1:10,0:10:3.48:60,3,0	1/1:18,0:18:7.83:88,8,0	1/1:19,0:19:8.64:55,9,0	1/1:19,0:18:3.46:37,3,0	./.	0/0:20,0:20:18.82:0,19,304	0/0:4,0:4:0.47:0,0,1	0/0:16,0:14:6.42:0,6,205	0/1:17,0:17:0:0,0,0	0/0:1,0:6:3.01:0,3,53	0/0:12,0:13:2.97:0,3,20	1/1:14,0:14:3.01:45,3,0	./.	1/1:15,2:18:3.01:40,3,0	1/1:16,1:17:20.72:262,21,0	1/1:13,0:13:2.94:20,3,0	1/1:2,0:2:3.01:77,3,0
chr10	24756808	.	CTCTGTGTGTGTATGTGTGTGTGTG	C	773.52	PASS	AB=1.000;AC=9;AF=0.167;AN=54;BaseQRankSum=-0.720;DP=365;FS=1.032;HRun=0;HaplotypeScore=130.0830;InbreedingCoeff=0.5034;MQ=35.07;MQ0=16;MQRankSum=0.650;QD=17.58;ReadPosRankSum=0.181;VQSLOD=1.8787;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:43.07:0,43,1985	0/0:6,0:6:8.92:0,9,204	0/0:14,0:2:5.84:0,6,34	0/0:18,0:3:3.01:0,3,56	0/0:21,0:19:5.94:0,6,42	0/1:13,0:12:0.59:1,0,21	0/0:16,0:16:13.40:0,13,715	0/0:19,0:16:43.94:0,44,1309	0/0:11,0:10:12.03:0,12,522	0/0:13,0:12:20.50:0,20,725	0/0:10,0:10:12.90:0,13,463	0/0:11,0:10:7.35:0,7,53	0/0:13,0:13:6.88:0,7,166	0/0:22,0:20:14.80:0,15,722	0/0:14,0:13:3.90:0,4,171	./.	1/1:15,0:15:23.59:413,24,0	1/1:1,0:1:2.92:17,3,0	1/1:2,6:6:18.02:402,18,0	0/0:0,9:10:0:0,0,0	1/1:7,0:5:3.01:73,3,0	0/0:11,0:11:2.81:0,3,25	0/0:15,0:15:11.25:0,11,587	0/0:13,0:13:2.99:0,3,24	0/0:17,0:17:3.01:0,3,191	0/0:15,0:14:29.96:0,30,1122	0/0:15,0:15:9.44:0,9,100	0/0:2,0:2:6.02:0,6,331
chr10	24756810	.	CTG	C	397.68	PASS	AB=0.976;AC=27;AF=0.614;AN=44;BaseQRankSum=3.139;DP=358;FS=1.053;HRun=0;HaplotypeScore=71.1569;InbreedingCoeff=0.3414;MQ=34.67;MQ0=14;MQRankSum=1.395;QD=2.13;ReadPosRankSum=0.633;VQSLOD=1.2650;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,1:29:10.17:0,10,207	1/1:6,0:6:2.96:19,3,0	0/0:13,0:2:2.97:0,3,20	0/0:16,0:2:3.01:0,3,33	./.	0/1:12,0:11:0.01:0,0,0	1/1:16,0:16:12.17:89,12,0	0/0:19,0:16:37.60:0,38,391	1/1:9,1:10:7.98:54,8,0	0/1:12,1:12:10.93:47,0,11	1/1:7,1:8:5.82:49,6,0	0/0:10,1:11:0.94:0,1,3	1/1:14,0:14:5.77:30,6,0	1/1:22,0:20:8.93:70,9,0	1/1:12,2:13:2.72:17,3,0	./.	0/0:15,0:15:2.62:0,3,25	./.	1/1:8,0:6:4.22:18,4,0	./.	./.	0/0:11,0:11:2.91:0,3,20	1/1:14,1:15:1.58:17,2,0	./.	1/1:17,0:17:2.97:20,3,0	0/1:15,0:14:21.11:69,0,21	1/1:14,0:14:1.08:3,1,0	1/1:2,0:2:5.56:30,6,0
chr10	24756818	.	GTA	G	342.90	PASS	AB=0.934;AC=30;AF=0.652;AN=46;BaseQRankSum=2.997;DP=338;FS=0.942;HRun=0;HaplotypeScore=68.2056;InbreedingCoeff=0.2823;MQ=34.54;MQ0=16;MQRankSum=1.689;QD=1.64;ReadPosRankSum=1.352;VQSLOD=1.2506;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:15.58:0,16,183	1/1:7,0:7:2.04:6,2,0	0/0:6,0:1:2.90:0,3,16	0/0:10,0:2:3:0,3,28	./.	0/1:11,1:11:0.01:0,0,0	1/1:16,1:17:6.71:24,7,0	0/0:18,0:15:34.03:0,34,319	1/1:11,0:10:6.04:28,6,0	0/1:11,0:9:14.22:34,0,14	1/1:8,0:8:2.19:9,2,0	0/0:15,1:15:1.36:0,1,4	0/1:14,0:14:5.85:6,0,14	1/1:20,0:18:8.13:37,8,0	1/1:11,0:10:2.54:11,3,0	./.	1/1:11,0:11:9.81:66,10,0	./.	1/1:9,0:6:14.90:116,15,0	./.	1/1:7,0:5:2.99:24,3,0	0/1:6,3:9:0:0,0,0	0/1:13,1:14:1.67:15,0,2	./.	1/1:17,1:18:1.55:4,2,0	0/1:14,0:12:17.50:25,0,17	1/1:13,1:14:2.76:17,3,0	1/1:1,1:2:5.99:51,6,0
chr10	24756853	.	TGTGTGC	T	145.43	PASS	AB=1.000;AC=25;AF=0.521;AN=48;BaseQRankSum=3.952;DP=273;FS=0.000;HRun=0;HaplotypeScore=49.4415;InbreedingCoeff=0.1733;MQ=33.88;MQ0=19;MQRankSum=-0.134;QD=0.94;ReadPosRankSum=0.872;VQSLOD=0.8697;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:19:12.85:0,13,328	1/1:5,0:5:2.04:6,2,0	0/0:6,0:2:6.01:0,6,71	0/0:12,0:2:5.69:0,6,43	./.	1/1:9,0:8:2.70:20,3,0	0/1:17,0:17:6.02:6,0,12	0/0:12,0:12:29.29:0,29,339	0/1:8,0:7:11.73:34,0,12	0/1:8,0:6:2.86:25,0,3	1/1:7,0:7:1.35:4,1,0	0/0:15,0:14:1.83:0,2,4	0/1:11,0:11:7.07:7,0,38	1/1:21,1:20:3.75:29,4,0	0/0:11,1:11:2.50:0,2,9	0/1:5,0:4:0:0,0,0	1/1:7,0:7:2.97:26,3,0	./.	0/1:12,0:11:0.32:0,0,100	./.	0/0:5,0:2:2.98:0,3,21	1/1:5,1:6:0.47:1,0,0	0/1:8,0:8:11.41:11,0,25	./.	1/1:11,0:10:2.97:20,3,0	0/0:8,0:5:0.26:0,0,15	1/1:14,2:16:2.85:54,3,0	1/1:2,0:1:3:29,3,0
chr10	24756855	.	TGTGC	T	420.43	PASS	AB=0.681;AC=30;AF=0.625;AN=48;BaseQRankSum=4.882;DP=270;FS=0.000;HRun=0;HaplotypeScore=46.2171;InbreedingCoeff=0.4547;MQ=33.99;MQ0=18;MQRankSum=1.672;QD=2.86;ReadPosRankSum=0.971;VQSLOD=1.3125;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:19:12.85:0,13,240	1/1:5,0:5:3:25,3,0	0/0:6,0:2:5.95:0,6,57	0/0:12,0:2:5.69:0,6,59	./.	1/1:9,0:8:2.84:20,3,0	1/1:15,2:17:9.90:77,10,0	0/0:13,0:13:31.54:0,32,211	1/1:8,0:7:3.48:34,3,0	1/1:8,0:6:3.90:51,4,0	1/1:6,1:7:5.78:45,6,0	0/0:11,3:13:0.94:0,1,2	0/1:5,6:11:12.20:12,0,19	1/1:19,1:19:10.83:90,11,0	0/0:12,0:11:2.04:0,2,6	0/1:3,2:4:0:0,0,0	1/1:7,0:7:2.34:8,2,0	./.	0/0:12,0:11:14.38:0,14,115	./.	0/0:5,0:2:2.98:0,3,21	1/1:6,0:6:0.47:1,0,0	1/1:7,1:8:5.69:39,6,0	./.	1/1:10,0:9:2.96:19,3,0	1/1:8,0:5:10.50:73,11,0	1/1:16,0:16:2.76:23,3,0	1/1:2,0:1:3.01:47,3,0
chr10	24756857	.	TGC	T	872.63	PASS	AB=0.773;AC=28;AF=0.636;AN=44;BaseQRankSum=3.796;DP=264;FS=2.439;HRun=0;HaplotypeScore=43.8822;InbreedingCoeff=0.5995;MQ=40.59;MQ0=18;MQRankSum=1.782;QD=6.42;ReadPosRankSum=0.683;VQSLOD=2.7566;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:18:12.21:0,12,140	1/1:1,3:4:3.01:41,3,0	0/0:7,0:3:8.70:0,9,63	0/0:13,0:3:8.49:0,8,60	./.	1/1:6,3:8:2.97:20,3,0	1/1:3,14:17:12.47:146,12,0	0/0:13,0:13:19.86:0,20,115	1/1:2,5:6:5.93:57,6,0	1/1:3,5:6:8.52:104,9,0	1/1:2,5:7:6.02:84,6,0	./.	1/1:10,1:11:7.92:44,8,0	1/1:15,5:19:11.67:141,12,0	./.	0/1:5,0:4:0:0,0,0	0/0:7,0:7:2.60:0,3,11	./.	0/0:12,0:11:26.69:0,27,129	./.	0/0:5,0:2:2.98:0,3,21	0/1:1,5:6:0:0,0,0	1/1:1,6:7:11.97:143,12,0	./.	1/1:1,8:8:3.01:36,3,0	1/1:3,5:5:12.01:146,12,0	1/1:3,13:16:2.90:18,3,0	1/1:1,1:1:3.01:40,3,0
chr10	24758038	.	G	GTTCAAGGCTTTA	56892.54	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-3.346;DP=615;FS=3.986;HRun=0;HaplotypeScore=192.3119;InbreedingCoeff=0.9463;MQ=78.27;MQ0=0;MQRankSum=-13.910;QD=112.44;ReadPosRankSum=3.116;VQSLOD=5.1021;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:75.24:0,75,2544	1/1:5,10:21:44.93:2258,45,0	0/0:29,0:29:63.20:0,63,1866	0/0:29,0:29:64.89:0,65,1750	1/1:13,8:24:57.20:2281,57,0	1/1:13,11:24:66.23:3390,66,0	1/1:17,14:32:75.26:3915,75,0	0/0:24,0:24:48.16:0,48,1525	1/1:8,1:13:27.09:1112,27,0	1/1:14,6:24:63.13:2667,63,0	1/1:6,2:12:24.08:900,24,0	1/1:6,15:21:57.20:3157,57,0	1/1:13,15:32:69.24:3857,69,0	1/1:13,11:27:63.22:3217,63,0	1/1:6,7:15:36.08:1758,36,0	1/1:13,7:24:48.16:2309,48,0	1/1:6,5:11:12.04:722,12,0	1/1:6,3:9:11.83:306,12,0	1/1:16,7:24:63.20:2717,63,0	1/1:17,14:32:90.19:4011,90,0	1/1:8,2:10:21.06:858,21,0	1/1:10,8:19:48.16:2311,48,0	1/1:8,11:25:44.56:2301,45,0	1/1:5,9:16:30.10:1527,30,0	1/1:17,10:27:72.25:3435,72,0	1/1:20,12:34:87.30:4237,87,0	1/1:11,15:28:66.23:3497,66,0	1/1:2,0:2:4.83:148,5,0
chr10	24759959	.	CTG	C	519.41	PASS	AB=0.932;AC=9;AF=0.161;AN=56;BaseQRankSum=4.232;DP=586;FS=29.051;HRun=0;HaplotypeScore=138.0303;InbreedingCoeff=0.5034;MQ=56.80;MQ0=17;MQRankSum=-0.321;QD=4.52;ReadPosRankSum=-3.313;VQSLOD=0.8203;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:32.80:0,33,781	0/0:8,1:9:15.23:0,15,132	0/0:9,0:5:8.91:0,9,70	0/1:24,0:15:6.68:7,0,77	0/0:33,0:32:50.91:0,51,548	0/0:31,0:31:11.16:0,11,423	0/0:14,0:10:14.86:0,15,131	0/0:38,0:38:56.57:0,57,1263	0/0:14,0:14:8.99:0,9,98	0/0:25,0:23:19.51:0,20,324	0/0:21,0:21:33.61:0,34,316	0/0:18,0:18:31.57:0,32,198	0/0:15,0:15:38.12:0,38,290	0/0:19,0:19:39.28:0,39,303	0/0:26,0:26:16.75:0,17,428	0/0:21,0:21:38.95:0,39,307	0/1:14,2:16:39.04:56,0,39	1/1:15,0:11:15.16:99,15,0	1/1:16,0:16:3.24:88,3,0	1/1:25,1:25:50.80:366,51,0	0/1:16,1:15:7.06:49,0,7	0/0:18,0:16:43.12:0,43,346	0/0:13,0:12:1.51:0,2,71	0/0:26,0:24:11.71:0,12,274	0/0:18,0:18:46.15:0,46,429	0/0:29,0:26:15.22:0,15,609	0/0:32,0:32:20.60:0,21,191	0/0:12,0:9:16.50:0,16,192
chr10	24771373	.	TAA	T	2579.40	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=8.887;DP=579;FS=4.045;HRun=10;HaplotypeScore=92.6351;InbreedingCoeff=0.9811;MQ=61.96;MQ0=1;MQRankSum=-0.371;QD=25.29;ReadPosRankSum=2.330;VQSLOD=3.7379;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:57.11:0,57,825	0/0:8,0:8:21.06:0,21,312	0/0:7,0:6:15.05:0,15,218	0/0:9,0:7:9.03:0,9,143	0/0:32,0:34:83.26:0,83,1255	0/0:20,0:21:56.67:0,57,843	0/0:15,0:15:39.12:0,39,597	0/0:28,0:29:65.71:0,66,1008	0/0:17,0:17:39.12:0,39,597	0/0:30,0:31:87.29:0,87,1362	0/0:17,0:18:47.64:0,48,705	0/0:18,0:18:54.18:0,54,857	0/0:27,0:27:81.28:0,81,1283	0/0:19,0:20:50.64:0,51,744	0/0:29,0:29:81.25:0,81,1241	0/0:21,0:22:62.70:0,63,961	1/1:0,19:19:48.12:535,48,0	1/1:4,20:24:57.14:635,57,0	1/1:5,14:19:42.11:468,42,0	1/1:4,26:30:77.93:848,78,0	1/1:1,8:9:24.06:268,24,0	0/0:12,0:12:30.10:0,30,476	0/0:14,0:14:36.11:0,36,544	0/0:16,0:16:29.58:0,30,382	0/0:32,0:32:93.30:0,93,1430	0/0:23,0:24:66.22:0,66,1029	0/0:41,0:41:99:0,99,1524	0/0:12,0:12:30.10:0,30,476
chr10	24777776	.	A	AT	868.04	PASS	AC=26;AF=1.000;AN=26;DP=77;FS=0.000;HRun=1;HaplotypeScore=8.2017;InbreedingCoeff=-0.1341;MQ=17.63;MQ0=47;QD=16.69;VQSLOD=3.3198;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	./.	1/1:0,2:2:6.02:90,6,0	1/1:4,3:4:11.99:153,12,0	./.	1/1:2,1:1:3.01:45,3,0	1/1:3,1:2:3.01:39,3,0	./.	1/1:1,1:1:3.01:45,3,0	1/1:0,2:2:6.02:89,6,0	1/1:1,1:1:3.01:45,3,0	1/1:2,2:2:5.99:66,6,0	1/1:2,2:2:5.95:63,6,0	1/1:6,0:2:3.01:31,3,0	./.	1/1:6,0:1:3:28,3,0	1/1:3,0:2:5.93:46,6,0	./.	./.	./.	./.	./.	./.	1/1:4,3:5:15.02:201,15,0	./.
chr10	24777777	.	T	TA	454.88	PASS	AC=24;AF=0.923;AN=26;BaseQRankSum=-1.531;DP=74;FS=0.000;HRun=2;HaplotypeScore=10.0746;InbreedingCoeff=0.1009;MQ=17.34;MQ0=46;MQRankSum=0.191;QD=9.68;ReadPosRankSum=2.487;VQSLOD=1.3546;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:2,0:1:2.97:0,3,20	./.	./.	./.	./.	1/1:3,0:3:5.99:48,6,0	1/1:7,0:4:7.19:71,7,0	./.	1/1:3,0:1:3:25,3,0	./.	./.	1/1:2,0:1:2.99:24,3,0	1/1:2,0:2:5.99:50,6,0	1/1:2,0:1:3:25,3,0	1/1:4,0:2:2.97:25,3,0	1/1:4,0:2:1.84:22,2,0	1/1:4,2:2:3.01:48,3,0	./.	1/1:5,1:1:3.01:48,3,0	1/1:1,2:2:6.02:82,6,0	./.	./.	./.	./.	./.	./.	1/1:5,0:3:8.98:71,9,0	./.
chr10	24778038	.	T	TA	612.18	PASS	AC=28;AF=0.933;AN=30;BaseQRankSum=0.717;DP=53;FS=0.000;HRun=2;HaplotypeScore=52.6311;InbreedingCoeff=0.3662;MQ=88.61;MQ0=1;MQRankSum=-2.377;QD=17.49;ReadPosRankSum=1.622;VQSLOD=3.6252;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,3:3:9.03:111,9,0	./.	0/0:7,0:5:5.94:0,6,41	./.	./.	./.	1/1:1,0:1:0.89:2,1,0	./.	1/1:2,0:2:0.89:2,1,0	./.	./.	1/1:2,0:2:1.77:5,2,0	1/1:3,0:3:5.38:25,5,0	./.	1/1:3,0:3:2.66:7,3,0	1/1:1,0:1:2.92:17,3,0	./.	1/1:0,2:2:6.02:74,6,0	1/1:1,5:5:12.04:146,12,0	1/1:0,7:7:21.07:262,21,0	1/1:0,1:1:3.01:37,3,0	./.	./.	1/1:2,0:2:0.89:2,1,0	./.	./.	1/1:1,0:1:1.25:3,1,0	1/1:1,0:1:1.55:4,2,0
chr10	24778039	.	AT	A	337.38	PASS	AC=28;AF=0.933;AN=30;BaseQRankSum=1.094;DP=52;FS=0.000;HRun=1;HaplotypeScore=54.0135;InbreedingCoeff=0.2072;MQ=89.43;MQ0=1;MQRankSum=-2.377;QD=9.64;ReadPosRankSum=1.622;VQSLOD=1.1296;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,0:3:7.49:28,7,0	./.	0/0:1,3:5:5.93:0,6,44	./.	./.	./.	1/1:0,1:1:2.96:19,3,0	./.	1/1:1,1:2:2.96:19,3,0	./.	./.	1/1:0,2:2:5.91:38,6,0	1/1:0,3:3:8.88:58,9,0	./.	1/1:0,3:3:8.87:57,9,0	1/1:0,1:1:2.97:20,3,0	./.	1/1:2,0:2:4.99:19,5,0	1/1:5,1:5:9.91:37,10,0	1/1:7,0:7:17.34:62,17,0	1/1:1,0:1:2.50:9,2,0	./.	./.	1/1:0,2:2:2.94:18,3,0	./.	./.	1/1:0,1:1:2.97:20,3,0	1/1:0,1:1:2.98:21,3,0
chr10	24778046	.	AT	A	342.89	PASS	AC=30;AF=0.938;AN=32;BaseQRankSum=-0.571;DP=52;FS=4.102;HRun=1;HaplotypeScore=57.2826;InbreedingCoeff=0.2028;MQ=74.85;MQ0=1;MQRankSum=-1.444;QD=8.16;ReadPosRankSum=-0.101;VQSLOD=0.8134;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,0:3:3.74:10,4,0	./.	0/0:4,0:2:3.01:0,3,38	./.	./.	./.	1/1:0,1:2:5.92:39,6,0	./.	1/1:1,1:2:5.92:39,6,0	./.	./.	1/1:0,2:2:5.91:38,6,0	1/1:0,3:3:8.88:58,9,0	1/1:1,1:1:2.97:20,3,0	1/1:1,3:4:11.84:78,12,0	1/1:1,1:2:2.97:20,3,0	./.	1/1:2,0:2:3.11:9,3,0	1/1:7,0:6:6.48:18,6,0	1/1:7,0:7:6.81:19,7,0	1/1:1,0:1:1.25:3,1,0	./.	./.	1/1:0,2:2:5.90:37,6,0	./.	./.	1/1:1,1:2:2.97:20,3,0	1/1:0,1:1:2.97:20,3,0
chr10	24778068	.	T	TA	556.10	PASS	AB=1.000;AC=11;AF=0.324;AN=34;BaseQRankSum=-1.057;DP=70;FS=49.373;HRun=8;HaplotypeScore=59.5173;InbreedingCoeff=0.4751;MQ=72.94;MQ0=2;MQRankSum=-1.105;QD=14.26;ReadPosRankSum=0.498;VQSLOD=0.1440;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,1:4:3.01:35,3,0	./.	0/1:11,0:7:1.02:1,0,38	0/0:3,0:2:5.92:0,6,41	./.	1/1:1,0:1:0.47:1,0,0	0/0:4,0:4:6:0,6,54	./.	0/0:2,0:2:3:0,3,27	0/0:2,0:2:6:0,6,54	./.	0/0:2,0:2:3:0,3,27	0/0:3,0:3:5.99:0,6,52	./.	0/0:4,0:4:12:0,12,107	0/0:2,0:2:3:0,3,27	./.	1/1:0,2:2:6.02:69,6,0	1/1:4,8:12:27.08:311,27,0	1/1:2,7:9:24.03:257,24,0	./.	./.	./.	0/0:2,0:2:6:0,6,54	./.	./.	0/0:2,0:2:6:0,6,54	0/0:1,0:1:3:0,3,27
chr10	24778081	.	GCGCA	G	211.15	PASS	AB=1.000;AC=18;AF=0.818;AN=22;BaseQRankSum=0.938;DP=77;FS=1.810;HRun=0;HaplotypeScore=49.6965;InbreedingCoeff=-0.1471;MQ=69.09;MQ0=12;MQRankSum=1.120;QD=4.22;ReadPosRankSum=-0.635;VQSLOD=1.4180;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:2,1:2:3.01:51,3,0	./.	0/1:15,0:7:24.03:24,0,30	0/1:6,0:2:0.53:1,0,22	./.	./.	1/1:2,1:3:2.96:19,3,0	./.	./.	1/1:0,2:2:5.78:31,6,0	./.	./.	1/1:2,1:2:2.94:18,3,0	./.	./.	./.	0/1:4,0:2:6.46:6,0,14	1/1:2,0:2:5.95:42,6,0	0/1:9,0:9:14.09:69,0,14	./.	./.	./.	./.	./.	./.	./.	1/1:1,1:2:2.97:20,3,0	1/1:1,0:1:2.97:20,3,0
chr10	24778850	.	A	AGG	2689.65	PASS	AB=0.792;AC=21;AF=0.375;AN=56;BaseQRankSum=7.478;DP=541;FS=8.161;HRun=1;HaplotypeScore=210.8200;InbreedingCoeff=-0.6153;MQ=55.32;MQ0=7;MQRankSum=-8.009;QD=7.39;ReadPosRankSum=8.846;VQSLOD=-0.5346;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:18,5:23:99:108,0,158	0/1:2,2:4:6.95:62,0,7	0/0:43,0:15:32.39:0,32,318	0/0:58,0:20:13.35:0,13,255	0/1:18,11:29:50.03:173,0,50	0/1:7,4:11:47.59:127,0,48	0/1:15,5:18:92.43:183,0,92	0/0:29,0:28:62.94:0,63,761	0/1:13,2:15:62.04:62,0,112	0/1:20,5:25:99:231,0,99	0/1:14,8:22:99:161,0,115	0/1:6,4:10:16.87:111,0,17	0/1:13,4:17:87.31:87,0,151	0/1:11,4:15:92.91:127,0,93	0/1:9,8:17:7.67:277,0,8	0/1:12,6:18:65.42:161,0,65	0/0:7,0:7:15.45:0,15,93	0/1:10,0:9:24.20:24,0,78	0/1:19,0:19:37.06:37,0,234	0/0:10,0:9:4.31:0,4,28	0/0:13,0:13:4.81:0,5,35	0/1:15,5:20:48.33:185,0,48	0/1:15,6:21:60.27:176,0,60	0/0:10,3:12:0.64:0,1,76	0/1:10,6:16:35.75:145,0,36	0/1:22,2:24:76.17:76,0,227	0/1:13,7:20:99:211,0,112	0/1:5,3:8:21.08:119,0,21
chr10	24778870	.	A	AGAG	14173.37	PASS	AB=0.613;AC=49;AF=0.875;AN=56;BaseQRankSum=4.887;DP=584;FS=8.169;HRun=0;HaplotypeScore=200.2558;InbreedingCoeff=0.7316;MQ=61.33;MQ0=7;MQRankSum=-9.759;QD=34.15;ReadPosRankSum=1.825;VQSLOD=4.7594;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,19:24:48.15:979,48,0	1/1:3,2:5:9.03:172,9,0	0/0:56,0:24:37.97:0,38,644	0/0:81,0:32:37.65:0,38,634	1/1:8,16:25:8.55:191,9,0	1/1:1,14:15:36.12:764,36,0	0/1:7,12:17:26.48:556,0,26	0/0:31,0:30:78.26:0,78,1171	1/1:3,9:13:29.13:555,29,0	1/1:8,18:27:58.75:1199,59,0	1/1:3,19:23:30.10:635,30,0	1/1:2,10:13:30.10:638,30,0	1/1:6,6:13:27.05:527,27,0	1/1:4,8:12:24.08:501,24,0	1/1:6,12:19:30.06:573,30,0	1/1:5,10:16:30:638,30,0	1/1:1,7:9:17.16:381,17,0	1/1:6,4:10:1.70:123,2,0	1/1:6,9:16:27.55:498,28,0	1/1:2,5:8:11.79:255,12,0	1/1:1,15:17:21.07:445,21,0	1/1:11,13:26:33.11:676,33,0	1/1:7,14:21:42.06:805,42,0	1/1:5,10:16:12:210,12,0	1/1:7,13:20:30.06:585,30,0	1/1:9,11:21:51.15:986,51,0	1/1:4,11:16:39.05:775,39,0	1/1:2,7:10:24.08:510,24,0
chr10	24779561	.	T	TCTC	7918.41	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-11.912;DP=528;FS=14.626;HRun=0;HaplotypeScore=81.1391;InbreedingCoeff=0.9332;MQ=96.26;MQ0=0;MQRankSum=-4.006;QD=49.18;ReadPosRankSum=-1.043;VQSLOD=5.6722;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,45:49:96.33:2174,96,0	0/0:3,0:3:9.03:0,9,150	0/0:26,0:26:60.10:0,60,981	0/0:33,0:33:90.01:0,90,1349	0/0:10,0:10:27.09:0,27,450	0/0:24,0:24:69.24:0,69,1146	0/0:18,0:18:54.18:0,54,893	1/1:6,26:34:93.27:1818,93,0	0/0:16,0:16:45.15:0,45,750	0/0:11,0:11:30.10:0,30,500	0/0:15,0:15:42.14:0,42,696	0/0:20,0:20:60.21:0,60,1000	0/0:20,0:20:51.16:0,51,824	0/0:31,0:31:93.32:0,93,1549	0/0:16,0:16:42.14:0,42,700	0/0:21,0:21:51.17:0,51,850	1/1:2,22:24:63.22:1428,63,0	1/1:1,3:4:4.88:134,5,0	1/1:3,16:19:51.18:1122,51,0	1/1:1,7:9:5.71:87,6,0	1/1:2,20:22:51.18:1156,51,0	0/0:4,0:4:9.03:0,9,146	0/0:7,0:7:21.07:0,21,337	0/0:22,0:22:66.23:0,66,1100	0/0:8,0:8:24.05:0,24,371	0/0:19,0:19:51.17:0,51,846	0/0:30,0:30:81.22:0,81,1293	0/0:13,0:13:36.12:0,36,599
chr10	24780243	.	G	GAGAGAGAA	7893.02	PASS	AB=1.000;AC=40;AF=0.714;AN=56;BaseQRankSum=2.764;DP=612;FS=1.692;HRun=0;HaplotypeScore=150.2096;InbreedingCoeff=0.5533;MQ=58.31;MQ0=16;MQRankSum=-3.288;QD=17.20;ReadPosRankSum=5.198;VQSLOD=3.8489;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:11.51:0,12,203	1/1:7,0:7:3.01:70,3,0	0/0:35,0:15:14.24:0,14,93	0/0:41,0:15:12.55:0,13,136	1/1:5,30:37:23.10:496,23,0	1/1:18,0:18:6.21:281,6,0	1/1:17,0:18:28.69:463,29,0	0/0:34,0:31:41.73:0,42,347	1/1:21,0:21:26.98:287,27,0	1/1:23,0:23:56.74:812,57,0	1/1:21,0:20:1.41:303,1,0	1/1:15,0:15:12.04:243,12,0	1/1:27,0:27:26.85:603,27,0	1/1:21,0:21:20.34:374,20,0	1/1:20,0:20:18.06:383,18,0	1/1:14,0:14:18.06:421,18,0	0/0:12,0:12:19.69:0,20,140	0/1:9,0:9:23.53:24,0,60	0/1:16,0:16:3.16:3,0,183	0/1:25,0:24:16.62:17,0,85	0/0:7,0:6:8.83:0,9,56	1/1:22,0:22:24.91:559,25,0	1/1:34,0:34:33.06:658,33,0	1/1:13,0:13:9.03:135,9,0	0/1:27,0:27:18.70:324,0,19	1/1:28,0:28:71.99:980,72,0	1/1:28,0:28:10.16:369,10,0	1/1:15,0:13:5.95:88,6,0
chr10	24780245	.	G	GAGAGAA	11268.39	PASS	AB=0.849;AC=37;AF=0.661;AN=56;BaseQRankSum=-3.426;DP=633;FS=0.000;HRun=0;HaplotypeScore=123.6702;InbreedingCoeff=0.7013;MQ=58.11;MQ0=16;MQRankSum=-1.820;QD=24.60;ReadPosRankSum=5.043;VQSLOD=4.1094;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:16.24:0,16,230	1/1:0,8:8:5.97:123,6,0	0/0:35,0:15:17.19:0,17,113	0/0:38,0:13:11.36:0,11,134	0/1:34,1:35:55.28:321,0,55	1/1:3,15:21:19.56:484,20,0	1/1:5,13:19:27.71:672,28,0	0/0:34,0:31:62.07:0,62,442	1/1:21,0:21:26.77:414,27,0	1/1:3,19:24:50.10:1127,50,0	1/1:5,17:23:27.43:539,27,0	1/1:2,12:16:14.94:379,15,0	1/1:3,21:27:32.87:945,33,0	1/1:6,13:21:26.79:618,27,0	1/1:2,18:22:20.82:588,21,0	1/1:2,14:17:18.35:627,18,0	0/0:12,0:12:19.13:0,19,141	0/0:7,0:7:11.33:0,11,88	0/0:17,0:17:10.45:0,10,229	0/1:27,0:26:10.61:11,0,122	0/0:8,0:7:8.83:0,9,56	1/1:4,18:22:30.85:836,31,0	1/1:2,29:34:30.24:817,30,0	1/1:5,8:15:3.45:206,3,0	1/1:4,23:29:10.63:538,11,0	1/1:4,23:30:75.43:1352,75,0	1/1:3,22:27:10.17:554,10,0	0/1:5,14:17:3.66:118,0,4
chr10	24780247	.	G	GAGAA	7194.48	PASS	AB=0.973;AC=28;AF=0.500;AN=56;BaseQRankSum=2.980;DP=626;FS=0.000;HRun=0;HaplotypeScore=122.1494;InbreedingCoeff=0.2000;MQ=57.43;MQ0=17;MQRankSum=-2.769;QD=15.92;ReadPosRankSum=8.547;VQSLOD=3.5608;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:14.47:0,14,246	0/1:8,0:8:10.59:52,0,11	0/0:34,0:14:20.22:0,20,150	0/0:39,0:13:11.64:0,12,135	0/1:35,1:36:99:263,0,109	1/1:21,0:21:2.18:247,2,0	1/1:16,2:18:26.79:539,27,0	0/0:35,0:32:67.36:0,67,485	1/1:4,17:22:20.02:714,20,0	0/1:22,0:22:27.55:499,0,28	0/1:23,1:24:58.36:333,0,58	0/1:13,1:14:2.14:240,0,2	0/1:26,0:27:1.55:490,0,2	0/1:22,0:22:27.83:303,0,28	1/1:21,1:22:5.54:355,6,0	1/1:17,0:17:20.93:375,21,0	0/0:12,0:12:19.63:0,20,142	0/0:6,0:6:14.70:0,15,93	0/0:16,0:16:12.69:0,13,256	0/1:28,0:27:7.62:8,0,149	0/0:8,0:7:12.30:0,12,81	0/1:20,0:20:6.41:424,0,6	1/1:32,1:33:30.91:542,31,0	0/1:13,2:15:1.33:228,0,1	0/1:28,0:28:7.64:310,0,8	1/1:28,1:29:24.48:848,24,0	1/1:25,1:26:10.17:359,10,0	0/1:19,0:17:30.62:67,0,31
chr10	24780249	.	G	GAGAA	3225.28	PASS	AB=0.976;AC=29;AF=0.518;AN=56;BaseQRankSum=8.294;DP=622;FS=1.462;HRun=0;HaplotypeScore=137.3981;InbreedingCoeff=-0.3678;MQ=57.00;MQ0=17;MQRankSum=-6.679;QD=6.62;ReadPosRankSum=11.080;VQSLOD=1.0793;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:17.15:0,17,233	0/1:7,0:7:10.98:24,0,11	0/0:34,0:12:13.87:0,14,142	0/0:42,0:15:24.11:0,24,228	0/1:37,0:37:56.69:57,0,119	0/1:21,0:21:25.76:123,0,26	1/1:18,0:19:5.24:235,5,0	0/0:36,0:33:64.34:0,64,457	1/1:23,0:23:9.11:285,9,0	0/1:21,0:21:99:146,0,130	0/1:26,0:25:99:127,0,118	0/1:14,0:14:3.04:102,0,3	0/1:26,0:27:2.34:271,0,2	0/1:19,0:20:32.42:150,0,32	0/1:19,0:20:4.21:168,0,4	1/1:17,0:17:2.20:156,2,0	0/1:12,0:12:62.56:100,0,63	0/1:6,0:6:5.59:139,0,6	0/1:18,0:18:87.43:87,0,143	0/1:15,10:27:94.21:115,0,94	0/1:8,0:7:10.41:70,0,10	0/1:19,0:19:27.89:185,0,28	1/1:33,0:33:4.01:229,4,0	0/1:15,0:15:22.97:73,0,23	0/1:26,0:26:46.47:125,0,46	0/1:26,0:26:99:251,0,139	1/1:25,0:25:0.79:150,1,0	0/1:19,0:17:15.82:16,0,50
chr10	24781308	.	TG	T	16602.09	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=12.552;DP=606;FS=3.282;HRun=1;HaplotypeScore=71.3649;InbreedingCoeff=0.9969;MQ=86.25;MQ0=0;MQRankSum=-4.638;QD=38.88;ReadPosRankSum=4.447;VQSLOD=5.5395;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:39.13:0,39,623	1/1:0,9:9:27.05:356,27,0	0/0:21,0:21:63.21:0,63,984	0/0:18,0:18:47.36:0,47,681	1/1:0,30:30:81.18:1083,81,0	1/1:0,28:28:81.27:1133,81,0	1/1:0,12:12:27.09:378,27,0	0/0:36,0:36:99:0,108,1725	1/1:0,21:21:63.21:881,63,0	1/1:0,19:19:57.19:797,57,0	1/1:0,25:25:72.20:985,72,0	1/1:0,21:21:57.19:797,57,0	1/1:0,29:29:78.26:1091,78,0	1/1:0,33:33:90.30:1259,90,0	1/1:0,28:28:75.25:1049,75,0	1/1:0,26:26:63.21:881,63,0	0/0:14,0:14:42.12:0,42,637	0/0:8,0:8:24.08:0,24,378	0/0:18,0:18:54.16:0,54,837	0/0:31,0:31:93.32:0,93,1479	0/0:20,0:20:60.19:0,60,935	1/1:0,23:23:63.21:881,63,0	1/1:0,25:25:72.24:1007,72,0	1/1:0,5:5:15.05:210,15,0	1/1:0,19:19:54.18:755,54,0	1/1:0,36:36:99:1508,108,0	1/1:0,25:25:72.24:1004,72,0	1/1:0,13:13:39.13:545,39,0
chr10	24782382	.	G	GAT	10811.07	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-1.863;DP=412;FS=10.180;HRun=0;HaplotypeScore=50.9344;InbreedingCoeff=0.9331;MQ=66.38;MQ0=1;MQRankSum=-0.371;QD=38.61;ReadPosRankSum=3.862;VQSLOD=6.5297;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:39.13:0,39,507	1/1:0,5:5:15.05:255,15,0	0/0:4,0:4:2.79:0,3,27	0/0:5,0:4:6.85:0,7,50	1/1:2,26:29:63.22:1071,63,0	1/1:2,12:14:33.11:561,33,0	1/1:3,3:6:9.03:153,9,0	0/0:32,0:32:81.23:0,81,1024	1/1:2,12:14:30.10:510,30,0	1/1:3,24:26:69.23:1149,69,0	1/1:4,16:20:33.11:561,33,0	1/1:0,8:8:21.07:357,21,0	1/1:3,12:16:36.12:608,36,0	1/1:2,11:13:33.11:560,33,0	1/1:2,17:19:45.15:766,45,0	1/1:1,12:13:30.10:510,30,0	0/0:22,0:22:63.15:0,63,782	0/0:11,0:11:27.09:0,27,351	0/0:20,0:20:51.15:0,51,647	0/0:16,0:16:48.16:0,48,624	0/0:8,0:8:24.06:0,24,296	1/1:1,5:6:9.03:153,9,0	1/1:1,7:9:21.07:357,21,0	1/1:2,7:9:18.06:306,18,0	1/1:2,9:11:27.09:459,27,0	1/1:2,21:24:63.19:1044,63,0	1/1:1,20:21:51.17:868,51,0	1/1:2,13:15:33.11:561,33,0
chr10	24782579	.	A	AT	629.87	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-5.572;DP=497;FS=0.838;HRun=7;HaplotypeScore=49.8346;InbreedingCoeff=0.9637;MQ=76.68;MQ0=0;MQRankSum=-2.748;QD=26.24;ReadPosRankSum=1.428;VQSLOD=4.1732;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,22:24:60.18:725,60,0	0/0:9,0:9:24.04:0,24,232	0/0:20,0:19:29.94:0,30,293	0/0:27,0:22:41.40:0,41,362	0/0:29,0:29:84.13:0,84,811	0/0:21,0:21:54.08:0,54,521	0/0:13,0:13:33.04:0,33,319	0/0:25,0:25:54.07:0,54,522	0/0:16,0:16:42.06:0,42,405	0/0:18,0:18:51.08:0,51,492	0/0:25,0:25:66.09:0,66,632	0/0:10,0:10:30.05:0,30,290	0/0:14,0:14:39.06:0,39,377	0/0:7,0:7:21.02:0,21,197	0/0:22,0:22:57.07:0,57,544	0/0:9,0:9:24.04:0,24,232	0/0:27,0:27:69.10:0,69,666	0/0:13,0:13:24.04:0,24,232	0/0:23,0:23:69.11:0,69,666	0/0:29,0:29:81.12:0,81,777	0/0:9,0:9:18.02:0,18,174	0/0:9,0:9:27.04:0,27,261	0/0:10,0:10:27.03:0,27,255	0/0:7,0:7:15.02:0,15,145	0/0:18,0:18:51.08:0,51,492	0/0:22,0:22:60.08:0,60,574	0/0:22,0:22:63.04:0,63,597	0/0:19,0:19:57.09:0,57,550
chr10	24784171	.	GA	G	6976.22	PASS	AB=0.544;AC=38;AF=0.679;AN=56;BaseQRankSum=7.271;DP=556;FS=5.577;HRun=11;HaplotypeScore=58.4954;InbreedingCoeff=0.7819;MQ=63.65;MQ0=4;MQRankSum=0.995;QD=18.07;ReadPosRankSum=2.765;VQSLOD=6.0646;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:93.21:0,93,978	1/1:3,3:6:5.98:49,6,0	0/0:13,0:8:1.08:0,1,157	0/0:21,0:16:14.89:0,15,149	1/1:4,18:22:53.93:443,54,0	1/1:2,15:17:41.95:345,42,0	1/1:2,12:14:32.96:271,33,0	1/1:7,20:27:59.89:487,60,0	0/1:1,9:10:2.02:192,0,2	1/1:9,19:28:65.89:538,66,0	1/1:4,15:19:41.94:345,42,0	1/1:2,11:13:32.96:271,33,0	1/1:4,22:26:64.16:520,64,0	1/1:2,16:18:41.93:345,42,0	1/1:7,20:27:15.93:337,16,0	1/1:2,12:14:6.96:264,7,0	0/0:20,0:20:45.08:0,45,468	0/0:16,1:17:20.94:0,21,267	0/0:21,1:22:20.28:0,20,393	0/0:27,1:31:56.19:0,56,760	0/0:8,0:8:8.96:0,9,82	1/1:7,14:21:44.93:369,45,0	1/1:8,19:27:24.83:411,25,0	0/1:4,14:18:47.80:273,0,48	1/1:3,14:17:35.95:296,36,0	1/1:3,24:27:65.87:539,66,0	1/1:3,24:27:33.94:485,34,0	1/1:0,8:8:23.97:197,24,0
chr10	24785670	.	T	TA	438.19	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=-3.915;DP=524;FS=0.880;HRun=9;HaplotypeScore=52.3565;InbreedingCoeff=0.6175;MQ=73.69;MQ0=0;MQRankSum=-0.321;QD=14.61;ReadPosRankSum=0.914;VQSLOD=3.4604;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,17:19:48.13:531,48,0	0/0:16,0:16:41.95:0,42,357	0/1:11,0:11:8.94:9,0,156	0/0:5,1:6:5.96:0,6,44	0/0:26,0:26:59.95:0,60,517	0/0:23,0:23:62.98:0,63,547	0/0:9,0:9:26.98:0,27,230	0/0:29,0:30:69.16:0,69,583	0/0:15,0:15:32.98:0,33,286	0/0:22,0:22:59.99:0,60,521	0/0:20,0:20:50.96:0,51,439	0/0:22,0:22:65.95:0,66,565	0/0:22,0:23:62:0,62,521	0/0:15,0:15:32.97:0,33,284	0/0:18,0:18:50.99:0,51,443	0/0:14,0:14:35.97:0,36,308	0/0:15,0:15:41.97:0,42,360	0/0:13,0:14:38.02:0,38,318	0/0:17,0:19:46:0,46,367	0/0:39,1:40:56.74:0,57,716	0/0:7,0:7:14.99:0,15,130	0/0:20,0:20:50.96:0,51,438	0/0:26,0:26:71.97:0,72,623	0/0:14,0:14:26.98:0,27,234	0/0:20,0:20:44.98:0,45,391	0/0:21,0:21:59.98:0,60,521	0/0:28,0:30:79.03:0,79,657	0/0:7,0:8:23.03:0,23,188
chr10	24789167	.	TA	T	3759.16	PASS	AB=0.581;AC=46;AF=0.821;AN=56;BaseQRankSum=-3.918;DP=372;FS=12.492;HRun=12;HaplotypeScore=43.7758;InbreedingCoeff=0.5893;MQ=59.02;MQ0=1;MQRankSum=-3.707;QD=12.33;ReadPosRankSum=5.782;VQSLOD=1.6799;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,24:32:59.71:464,60,0	1/1:0,4:4:11.76:83,12,0	0/0:11,0:5:6.01:0,6,61	0/0:13,0:8:11.50:0,12,95	1/1:8,14:22:35.59:255,36,0	1/1:1,6:7:14.94:115,15,0	1/1:1,4:5:5.96:46,6,0	0/0:12,0:28:49.30:0,49,279	1/1:2,11:13:23.90:184,24,0	1/1:2,11:13:29.56:220,30,0	1/1:6,12:18:35.58:260,36,0	1/1:3,14:17:35.86:277,36,0	1/1:7,12:19:23.71:177,24,0	1/1:4,4:8:8.24:68,8,0	0/0:15,0:15:0:0,0,0	1/1:0,13:13:26.90:208,27,0	1/1:4,12:16:14.48:104,14,0	1/1:4,9:13:14.93:116,15,0	1/1:5,5:10:14.93:116,15,0	0/1:4,10:14:0.57:171,0,1	0/1:3,8:11:8.87:77,0,9	1/1:1,7:8:20.92:160,21,0	1/1:5,2:7:5.96:46,6,0	1/1:0,11:11:11.85:85,12,0	1/1:0,10:10:23.91:185,24,0	1/1:5,5:10:14.91:112,15,0	1/1:6,14:20:27.65:209,28,0	1/1:4,0:4:2.98:23,3,0
chr10	24789287	.	A	AG	651.72	PASS	AB=1.000;AC=40;AF=0.741;AN=54;BaseQRankSum=2.960;DP=154;FS=0.842;HRun=0;HaplotypeScore=28.2040;InbreedingCoeff=0.3037;MQ=68.28;MQ0=20;MQRankSum=0.879;QD=7.67;ReadPosRankSum=-4.608;VQSLOD=2.1431;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:41:99:0,102,1225	0/0:1,0:1:0:0,0,0	0/0:12,0:9:20.08:0,20,169	0/1:8,0:5:2.46:2,0,20	1/1:5,3:8:5.47:91,5,0	0/0:3,0:2:0:0,0,0	./.	1/1:10,0:9:1.23:20,1,0	1/1:2,0:2:1.48:6,1,0	1/1:0,2:2:6.01:62,6,0	1/1:4,0:3:5.38:40,5,0	1/1:3,1:2:2.91:32,3,0	0/0:2,0:1:0:0,0,0	1/1:0,3:3:3.01:34,3,0	0/0:6,0:6:10.41:0,10,28	0/1:2,0:2:3.98:19,0,4	1/1:4,0:2:2.96:21,3,0	1/1:1,3:4:2.05:30,2,0	1/1:1,1:2:2.81:34,3,0	1/1:2,0:1:3:25,3,0	1/1:3,0:3:2.89:27,3,0	1/1:3,0:1:3:26,3,0	1/1:2,0:1:3:28,3,0	1/1:5,0:2:6.01:57,6,0	1/1:1,1:2:2.85:32,3,0	1/1:5,0:4:5.59:62,6,0	1/1:3,1:2:2.87:32,3,0	1/1:6,0:4:11.81:106,12,0
chr10	24789289	.	A	AGAT	9119.81	PASS	AB=1.000;AC=49;AF=0.875;AN=56;BaseQRankSum=6.449;DP=323;FS=14.553;HRun=0;HaplotypeScore=159.3528;InbreedingCoeff=0.7475;MQ=54.12;MQ0=15;MQRankSum=-4.753;QD=35.21;ReadPosRankSum=0.199;VQSLOD=4.5993;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:41:99:0,111,1844	1/1:4,0:5:8.79:165,9,0	0/0:12,0:9:17.47:0,17,294	0/0:8,0:5:8.69:0,9,87	1/1:18,0:18:47.75:597,48,0	1/1:14,0:14:36.01:598,36,0	1/1:7,0:6:18.06:304,18,0	0/1:11,0:10:20.19:103,0,20	1/1:8,1:9:23.86:373,24,0	1/1:14,0:14:36.03:633,36,0	1/1:7,4:10:17.98:310,18,0	1/1:13,0:11:33.08:592,33,0	1/1:8,0:7:21.04:330,21,0	1/1:9,0:9:18.01:301,18,0	1/1:6,0:6:15.71:62,16,0	1/1:16,0:16:44.97:800,45,0	1/1:10,0:9:23.97:379,24,0	1/1:8,0:8:11.85:191,12,0	1/1:9,0:9:24.08:390,24,0	1/1:12,0:11:26.98:434,27,0	1/1:11,0:11:8.59:113,9,0	1/1:7,0:7:18:286,18,0	1/1:10,0:9:27.08:471,27,0	1/1:11,0:9:23.85:385,24,0	1/1:7,0:7:14.93:236,15,0	1/1:14,0:13:32.97:459,33,0	1/1:12,0:9:27:428,27,0	1/1:7,0:5:14.84:179,15,0
chr10	24790024	.	GA	G	1035.33	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.230;DP=560;FS=0.595;HRun=8;HaplotypeScore=52.1659;InbreedingCoeff=0.9740;MQ=68.87;MQ0=0;MQRankSum=0.515;QD=19.91;ReadPosRankSum=-2.678;VQSLOD=2.5446;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,22:26:60.09:579,60,0	0/0:10,0:10:30.09:0,30,362	0/0:10,0:10:16:0,16,197	0/0:13,0:11:11.68:0,12,215	0/0:27,0:27:63.66:0,64,762	0/0:25,0:25:60.18:0,60,724	0/0:13,0:13:39.12:0,39,471	1/1:4,22:26:59.28:577,59,0	0/0:16,0:16:45.13:0,45,534	0/0:29,0:29:81.25:0,81,978	0/0:24,0:24:57.17:0,57,689	0/0:18,0:18:48.15:0,48,577	0/0:27,0:27:81.21:0,81,943	0/0:28,0:28:75.23:0,75,906	0/0:18,0:18:51.16:0,51,613	0/0:24,0:24:69.21:0,69,832	0/0:17,0:17:42.13:0,42,507	0/0:29,0:29:78.22:0,78,927	0/0:13,0:13:30.09:0,30,362	0/0:26,0:26:75.21:0,75,884	0/0:13,0:13:36.11:0,36,435	0/0:12,0:12:33.10:0,33,399	0/0:27,0:27:81.24:0,81,967	0/0:14,0:14:42.13:0,42,507	0/0:22,0:22:60.18:0,60,723	0/0:21,0:21:57.14:0,57,664	0/0:25,0:25:72.21:0,72,857	0/0:7,0:7:21.06:0,21,254
chr10	24791742	.	A	ATGTGTGTG	13239.02	PASS	AB=0.647;AC=43;AF=0.768;AN=56;BaseQRankSum=-9.155;DP=586;FS=0.000;HRun=0;HaplotypeScore=189.5433;InbreedingCoeff=0.4459;MQ=57.42;MQ0=4;MQRankSum=-8.553;QD=28.41;ReadPosRankSum=-0.664;VQSLOD=4.1616;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:21,0:28:34:34,0,172	1/1:3,4:8:4:243,4,0	0/0:32,0:20:12.35:0,12,151	0/0:32,0:14:6.57:0,7,154	1/1:2,10:15:6.02:196,6,0	1/1:3,11:18:18.06:691,18,0	1/1:6,14:25:30.10:1077,30,0	0/1:18,0:34:90.48:241,0,90	1/1:3,10:14:30.10:1226,30,0	1/1:8,6:22:24.67:673,25,0	1/1:7,6:15:3.48:127,3,0	1/1:7,13:29:15.05:545,15,0	1/1:4,20:28:33.11:1306,33,0	1/1:1,8:14:15.05:554,15,0	1/1:2,0:29:42.13:820,42,0	1/1:6,11:25:21.07:718,21,0	0/1:4,0:16:0.27:0,0,161	0/1:5,0:11:5.50:5,0,47	0/1:1,0:5:9.23:9,0,33	0/0:6,0:33:39.33:0,39,308	0/0:4,0:23:40.50:0,40,279	1/1:2,7:10:11.91:383,12,0	1/1:5,5:14:1.96:432,2,0	1/1:3,5:13:6.02:176,6,0	1/1:9,11:23:21.13:696,21,0	1/1:9,18:34:61.95:2055,62,0	1/1:6,16:30:30.10:941,30,0	1/1:2,0:4:6.01:90,6,0
chr10	24794204	.	AC	A	5016.50	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=10.700;DP=768;FS=0.000;HRun=2;HaplotypeScore=80.5541;InbreedingCoeff=0.9998;MQ=85.72;MQ0=0;MQRankSum=-4.666;QD=34.13;ReadPosRankSum=2.851;VQSLOD=5.1334;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:59,0:59:99:0,178,2628	0/0:16,0:16:48.15:0,48,697	0/0:28,0:28:81.27:0,81,1182	0/0:27,0:27:71.24:0,71,983	0/0:33,0:33:96.31:0,96,1418	0/0:30,0:30:87.29:0,87,1303	0/0:18,0:18:54.18:0,54,807	0/0:47,0:47:99:0,138,2047	0/0:25,0:25:75.19:0,75,1073	0/0:30,0:30:87.29:0,87,1283	0/0:22,0:22:63.21:0,63,943	0/0:27,0:27:81.26:0,81,1194	0/0:32,0:32:96.33:0,96,1434	0/0:28,0:28:81.26:0,81,1191	1/1:1,39:40:99:1403,108,0	0/0:27,0:27:81.27:0,81,1213	1/1:0,21:21:45.15:584,45,0	1/1:0,12:12:33.11:428,33,0	1/1:0,20:20:60.20:779,60,0	1/1:0,23:23:66.21:849,66,0	1/1:0,31:31:75.24:974,75,0	0/0:23,0:23:69.19:0,69,990	0/0:24,0:24:72.19:0,72,1050	0/0:20,0:20:60.19:0,60,878	0/0:26,0:26:78.26:0,78,1169	0/0:27,0:27:81.27:0,81,1214	0/0:42,0:42:99:0,120,1750	0/0:10,0:10:30.09:0,30,430
chr10	24794335	.	CTTGTATGGTA	C	5815.60	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=10.560;DP=739;FS=0.490;HRun=0;HaplotypeScore=261.5536;InbreedingCoeff=0.9920;MQ=80.71;MQ0=0;MQRankSum=-12.391;QD=59.95;ReadPosRankSum=0.377;VQSLOD=4.1355;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,111,5582	0/0:12,0:12:36.12:0,36,1550	0/0:21,0:21:31.74:0,32,2462	0/0:20,0:20:51.56:0,52,2120	0/0:35,0:35:99:0,105,4470	0/0:32,0:32:96.29:0,96,3559	0/0:23,0:23:69.21:0,69,2813	0/0:37,0:37:99:0,111,5597	0/0:28,0:28:84.28:0,84,3659	0/0:37,0:37:99:0,111,4670	0/0:21,0:21:63.20:0,63,2666	0/0:28,0:28:81.28:0,81,3602	0/0:30,0:30:90.30:0,90,3854	0/0:24,0:24:72.25:0,72,3086	0/0:33,0:33:99:0,99,5196	0/0:29,0:29:84.27:0,84,3356	1/1:2,15:17:33.11:1053,33,0	1/1:1,13:14:12.04:407,12,0	1/1:3,11:14:33.07:1037,33,0	1/1:0,35:34:78.27:2505,78,0	1/1:2,15:17:30.10:814,30,0	0/0:28,0:28:81.27:0,81,3367	0/0:34,0:34:99:0,99,4122	0/0:27,0:27:78.26:0,78,3373	0/0:25,0:25:72.22:0,72,2899	0/0:31,0:31:93.31:0,93,3935	0/0:39,0:39:99:0,117,5181	0/0:8,0:8:24.08:0,24,1083
chr10	24794692	.	TAAA	T	14637.28	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-5.114;DP=575;FS=13.269;HRun=13;HaplotypeScore=113.6333;InbreedingCoeff=0.9234;MQ=64.48;MQ0=0;MQRankSum=-1.559;QD=26.71;ReadPosRankSum=4.270;VQSLOD=2.4725;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,9:13:21.01:251,21,0	1/1:1,7:8:11.99:146,12,0	0/0:13,0:11:6.09:0,6,223	0/0:13,0:12:23.26:0,23,356	1/1:1,20:22:47.88:546,48,0	1/1:4,20:25:54.02:626,54,0	1/1:2,19:21:36.07:438,36,0	1/1:4,23:27:61.93:735,62,0	1/1:3,11:14:33.06:401,33,0	1/1:7,24:31:72.18:872,72,0	1/1:5,23:28:63.02:747,63,0	1/1:1,10:11:27.07:328,27,0	1/1:2,24:26:54.09:657,54,0	1/1:3,18:21:51.11:615,51,0	1/1:2,0:21:52.94:321,53,0	1/1:1,19:20:54.14:657,54,0	1/1:4,22:27:54.05:636,54,0	1/1:1,12:13:33.05:398,33,0	1/1:3,19:22:54.11:656,54,0	1/1:4,22:26:66.08:783,66,0	1/1:1,12:13:30.06:365,30,0	1/1:5,23:28:66.16:801,66,0	1/1:2,16:18:35.73:412,36,0	1/1:3,17:20:45.12:547,45,0	1/1:0,24:24:57.08:693,57,0	1/1:6,18:24:54.09:656,54,0	1/1:3,28:31:84.25:1021,84,0	1/1:2,10:12:27.08:328,27,0
chr10	24795342	.	C	CA	3215.28	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-3.905;DP=726;FS=1.505;HRun=1;HaplotypeScore=69.9020;InbreedingCoeff=0.9935;MQ=86.36;MQ0=0;MQRankSum=-3.681;QD=40.70;ReadPosRankSum=-2.263;VQSLOD=3.3825;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,24:25:66.23:1055,66,0	0/0:9,0:9:24.08:0,24,335	0/0:26,0:26:68.96:0,69,945	0/0:23,0:23:30.94:0,31,682	0/0:36,0:36:99:0,105,1463	0/0:19,0:19:57.15:0,57,774	0/0:19,0:19:54.18:0,54,750	1/1:1,26:27:78.27:1248,78,0	0/0:25,0:25:75.25:0,75,1042	0/0:34,0:34:99:0,102,1426	0/0:23,0:23:63.21:0,63,867	0/0:33,0:33:96.32:0,96,1337	0/0:32,0:32:96.28:0,96,1319	0/0:28,0:28:84.28:0,84,1169	1/1:1,26:27:66.23:1055,66,0	0/0:33,0:33:99:0,99,1383	0/0:28,0:28:84.28:0,84,1174	0/0:19,0:19:57.19:0,57,797	0/0:23,0:23:69.23:0,69,961	0/0:31,0:31:90.30:0,90,1257	0/0:35,0:35:99:0,105,1464	0/0:37,0:37:99:0,105,1446	0/0:19,0:19:54.18:0,54,752	0/0:35,0:35:99:0,99,1384	0/0:25,0:25:75.25:0,75,1048	0/0:18,0:18:54.18:0,54,753	0/0:32,0:31:93.31:0,93,1292	0/0:5,0:5:15.05:0,15,209
chr10	24796492	.	G	GGTTT	19003.63	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=3.065;DP=655;FS=0.000;HRun=0;HaplotypeScore=153.8781;InbreedingCoeff=0.9125;MQ=63.05;MQ0=0;MQRankSum=-7.038;QD=32.48;ReadPosRankSum=0.478;VQSLOD=4.8519;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,10:20:17.10:733,17,0	1/1:18,0:18:42.14:686,42,0	0/0:26,0:24:22.07:0,22,323	0/0:13,0:12:6.02:0,6,88	1/1:33,0:33:57.12:886,57,0	1/1:28,0:28:57.19:930,57,0	1/1:22,0:22:12.04:197,12,0	1/1:21,15:36:14.20:1282,14,0	1/1:18,0:18:39.13:647,39,0	1/1:26,0:26:60.20:980,60,0	1/1:31,0:31:63.21:1020,63,0	1/1:20,0:20:27.09:444,27,0	1/1:24,0:24:42.14:696,42,0	1/1:24,0:24:45.15:735,45,0	0/0:31,0:31:75.25:0,75,1197	1/1:28,0:28:54.18:871,54,0	1/1:9,15:24:42.14:1020,42,0	1/1:10,8:19:18.53:438,19,0	1/1:11,7:19:30.10:654,30,0	1/1:11,30:41:90.31:2186,90,0	1/1:9,7:16:21.07:510,21,0	1/1:29,0:29:60.20:1007,60,0	1/1:24,0:24:45.15:729,45,0	1/1:9,0:9:18.06:294,18,0	1/1:21,0:21:39.13:638,39,0	1/1:24,0:24:33.11:539,33,0	1/1:22,0:22:45.15:735,45,0	1/1:9,0:9:9.03:147,9,0
chr10	24796499	.	T	TTGTTTGTG	34762.13	PASS	AB=1.000;AC=43;AF=0.768;AN=56;BaseQRankSum=-6.870;DP=708;FS=0.000;HRun=0;HaplotypeScore=143.0290;InbreedingCoeff=0.2866;MQ=59.66;MQ0=0;MQRankSum=-8.911;QD=54.49;ReadPosRankSum=7.771;VQSLOD=4.3594;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:20,0:20:99:131,0,103	1/1:0,15:15:42.14:1810,42,0	0/0:24,0:20:41.14:0,41,686	0/0:14,0:13:23.82:0,24,289	1/1:4,27:38:71.90:2465,72,0	1/1:2,25:30:57.20:2456,57,0	1/1:5,16:26:12.04:517,12,0	0/1:30,0:30:99:259,0,150	1/1:3,13:19:39.13:1676,39,0	1/1:2,24:32:84.17:3123,84,0	1/1:2,30:36:83.77:2844,84,0	1/1:2,16:22:27.09:1158,27,0	1/1:1,19:24:42.14:1806,42,0	1/1:2,20:24:45.15:1938,45,0	0/0:32,0:32:92.87:0,93,2145	1/1:3,26:36:57.20:2441,57,0	0/1:25,0:25:99:165,0,112	0/1:20,0:20:55.47:73,0,55	0/1:18,0:18:99:166,0,133	0/1:38,0:38:48.83:375,0,49	0/1:16,0:16:27.65:86,0,28	1/1:3,26:35:66.01:2602,66,0	1/1:4,19:27:45.15:1930,45,0	1/1:1,8:11:18.06:775,18,0	1/1:2,18:27:39.13:1681,39,0	1/1:5,19:29:68.77:1944,69,0	1/1:2,22:26:47.99:1952,48,0	1/1:0,9:14:9.03:388,9,0
chr10	24797080	.	CT	C	12775.61	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=0.650;DP=503;FS=3.288;HRun=7;HaplotypeScore=50.6717;InbreedingCoeff=0.9626;MQ=80.36;MQ0=0;MQRankSum=-6.634;QD=26.73;ReadPosRankSum=5.015;VQSLOD=5.2290;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,6:8:15.03:153,15,0	1/1:1,10:11:27.04:267,27,0	0/0:15,0:15:37:0,37,455	0/0:10,0:10:13.40:0,13,188	1/1:1,25:26:72.16:734,72,0	1/1:0,25:25:72.16:735,72,0	1/1:1,6:7:15.03:153,15,0	1/1:6,23:29:69.09:684,69,0	1/1:2,15:17:42.09:429,42,0	1/1:4,23:27:69.15:703,69,0	1/1:1,15:16:45.10:459,45,0	1/1:0,18:18:51.12:520,51,0	1/1:1,16:17:48.11:490,48,0	1/1:0,19:19:57.13:582,57,0	1/1:2,28:30:84.19:857,84,0	1/1:2,23:25:63.14:643,63,0	1/1:2,21:23:57.13:582,57,0	1/1:0,13:13:39.09:398,39,0	1/1:2,14:16:42.06:414,42,0	1/1:3,24:27:66.14:668,66,0	1/1:0,6:6:15.03:153,15,0	1/1:3,13:16:39.08:398,39,0	1/1:1,13:14:39.09:398,39,0	1/1:0,10:10:27.06:275,27,0	1/1:0,17:17:48.11:490,48,0	1/1:1,15:16:45.10:459,45,0	1/1:1,31:32:81.18:826,81,0	1/1:3,10:13:30.07:305,30,0
chr10	24797229	.	AT	A	8202.33	PASS	AB=0.909;AC=37;AF=0.661;AN=56;BaseQRankSum=11.542;DP=533;FS=2.027;HRun=9;HaplotypeScore=55.7992;InbreedingCoeff=0.9139;MQ=73.43;MQ0=0;MQRankSum=-0.503;QD=23.64;ReadPosRankSum=3.460;VQSLOD=5.7007;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:36.11:0,36,415	1/1:0,8:8:21.01:192,21,0	0/1:9,1:10:29.42:29,0,89	0/0:15,0:15:14.82:0,15,327	1/1:0,31:31:87.04:796,87,0	1/1:2,19:21:57.03:522,57,0	1/1:2,10:12:30.01:275,30,0	0/0:41,0:41:82.16:0,82,1082	1/1:0,9:9:27.01:247,27,0	1/1:3,24:27:75.01:677,75,0	1/1:0,27:27:69.02:632,69,0	1/1:0,15:15:39.02:357,39,0	1/1:0,19:19:48.03:439,48,0	1/1:0,16:16:48.03:439,48,0	0/0:22,1:23:38.73:0,39,700	1/1:2,13:15:39.02:357,39,0	0/0:29,0:29:72.17:0,72,814	0/0:18,0:18:51.15:0,51,589	0/0:13,0:13:39.11:0,39,443	0/0:25,0:25:66.20:0,66,762	0/0:7,0:7:21.06:0,21,242	1/1:1,24:25:69.03:632,69,0	1/1:1,24:25:57.03:522,57,0	1/1:0,6:6:18.01:165,18,0	1/1:2,28:30:75.04:687,75,0	1/1:2,18:20:54.03:494,54,0	1/1:2,21:23:63.03:577,63,0	1/1:1,7:8:18.01:165,18,0
chr10	24799158	.	G	GA	11208.64	PASS	AB=0.875;AC=53;AF=0.981;AN=54;BaseQRankSum=-3.354;DP=359;FS=7.261;HRun=5;HaplotypeScore=68.2713;InbreedingCoeff=-0.0279;MQ=62.03;MQ0=0;MQRankSum=-0.632;QD=31.31;ReadPosRankSum=2.872;VQSLOD=5.5596;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,14:15:42.06:514,42,0	1/1:2,3:5:9.03:118,9,0	1/1:2,4:6:12.04:158,12,0	0/1:5,1:7:14.39:93,0,14	1/1:2,19:21:46.10:587,46,0	1/1:1,14:15:41.97:474,42,0	1/1:1,8:9:24.05:298,24,0	1/1:3,12:15:36.12:473,36,0	1/1:2,12:14:36.05:436,36,0	1/1:4,19:23:57.19:751,57,0	1/1:2,14:16:37.03:451,37,0	1/1:1,11:12:30.05:375,30,0	1/1:0,6:6:18.06:236,18,0	1/1:1,17:18:51:592,51,0	1/1:1,21:22:60.02:711,60,0	1/1:2,10:12:30.03:357,30,0	1/1:0,9:9:21.07:276,21,0	1/1:1,5:6:12.04:158,12,0	1/1:0,6:6:18.06:237,18,0	1/1:1,25:26:75.16:947,75,0	1/1:0,4:4:9.03:118,9,0	1/1:2,8:10:24.01:278,24,0	1/1:1,13:14:30.05:375,30,0	1/1:1,4:5:9.03:119,9,0	1/1:1,21:22:60.08:732,60,0	1/1:1,11:12:33.11:434,33,0	1/1:1,27:28:72.16:909,72,0	./.
chr10	24799759	.	T	TCACACACACACACA	3967.47	PASS	AB=0.850;AC=34;AF=0.739;AN=46;BaseQRankSum=-1.968;DP=588;FS=15.134;HRun=0;HaplotypeScore=208.4277;InbreedingCoeff=0.5904;MQ=47.18;MQ0=34;MQRankSum=-1.691;QD=10.20;ReadPosRankSum=0.606;VQSLOD=1.5769;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:27:17.92:0,18,449	./.	./.	./.	1/1:21,0:21:6.02:84,6,0	1/1:25,0:21:9.50:191,10,0	1/1:24,0:20:3.07:66,3,0	1/1:32,0:32:7.27:105,7,0	1/1:10,5:19:2.91:199,3,0	1/1:21,0:19:28.33:675,28,0	./.	1/1:18,0:13:2.82:62,3,0	1/1:13,0:12:11.04:201,11,0	1/1:31,0:31:21.04:275,21,0	0/1:12,0:21:7.59:37,0,8	1/1:22,0:19:12.04:254,12,0	0/0:19,0:19:32.90:0,33,736	0/1:15,0:17:0.95:1,0,331	0/0:12,0:11:7.87:0,8,75	0/0:13,0:14:18.06:0,18,393	0/0:40,0:38:24.07:0,24,606	1/1:23,0:21:15.05:415,15,0	1/1:15,0:13:3.01:93,3,0	1/1:26,0:22:6.42:104,6,0	1/1:17,0:12:3.01:39,3,0	1/1:16,0:14:30.10:676,30,0	1/1:26,0:23:21.06:491,21,0	./.
chr10	24800734	.	T	TA	25139.20	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-6.745;DP=661;FS=0.583;HRun=1;HaplotypeScore=73.6065;InbreedingCoeff=0.9945;MQ=82.86;MQ0=0;MQRankSum=-9.811;QD=40.81;ReadPosRankSum=4.870;VQSLOD=5.1638;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,32:34:90.30:1348,90,0	1/1:0,9:9:24.08:360,24,0	0/0:18,0:18:48.14:0,48,583	0/0:27,0:27:75.12:0,75,891	1/1:0,29:29:87.29:1304,87,0	1/1:0,27:27:75.22:1100,75,0	1/1:1,23:24:63.21:944,63,0	1/1:2,26:28:81.27:1206,81,0	1/1:2,16:18:48.16:714,48,0	1/1:0,17:17:51.16:744,51,0	1/1:0,30:30:72.24:1079,72,0	1/1:1,22:24:53.62:890,54,0	1/1:1,40:42:99:1715,117,0	1/1:0,26:26:72.24:1079,72,0	1/1:1,24:25:75.20:1096,75,0	1/1:0,21:21:60.20:899,60,0	1/1:0,32:32:90.30:1349,90,0	1/1:0,7:7:18.06:270,18,0	1/1:1,17:18:51.15:741,51,0	1/1:3,31:34:90.22:1292,90,0	1/1:0,27:27:69.23:1034,69,0	1/1:0,19:19:57.19:854,57,0	1/1:0,12:12:30.10:450,30,0	1/1:0,27:27:69.23:1034,69,0	1/1:1,20:21:57.19:848,57,0	1/1:1,25:26:75.22:1082,75,0	1/1:0,27:27:78.26:1169,78,0	1/1:0,12:12:36.12:539,36,0
chr10	24801276	.	A	AT	1106.38	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-5.256;DP=554;FS=1.291;HRun=9;HaplotypeScore=70.8774;InbreedingCoeff=0.9531;MQ=75.86;MQ0=1;MQRankSum=-1.820;QD=22.13;ReadPosRankSum=-2.419;VQSLOD=3.5680;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,24:28:66.18:730,66,0	0/0:7,0:7:11.98:0,12,104	0/0:11,0:11:26.98:0,27,230	0/0:11,0:11:22.97:0,23,192	0/0:27,2:28:11.60:0,12,552	0/0:19,0:19:53.99:0,54,469	0/0:13,0:13:38.99:0,39,338	1/1:6,16:22:45.12:498,45,0	0/0:19,1:20:17.78:0,18,379	0/0:24,0:24:56.95:0,57,491	0/0:18,0:18:41.94:0,42,361	0/0:19,0:19:50.97:0,51,439	0/0:29,0:29:74.94:0,75,646	0/0:18,0:18:44.96:0,45,391	0/0:4,0:23:36.66:0,37,108	0/0:14,0:14:38.99:0,39,339	0/0:25,0:25:62.98:0,63,547	0/0:15,0:15:32.99:0,33,286	0/0:16,0:16:26.94:0,27,230	0/0:34,0:34:86.95:0,87,752	0/0:24,0:23:53.97:0,54,469	0/0:20,0:20:44.96:0,45,391	0/0:19,0:19:50.98:0,51,442	0/0:18,0:18:47.95:0,48,410	0/0:25,0:25:62.96:0,63,544	0/0:19,0:19:47.97:0,48,411	0/0:25,0:25:68.01:0,68,579	0/0:8,0:8:14.99:0,15,130
chr10	24801381	.	ATT	A	4043.54	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=14.165;DP=531;FS=9.645;HRun=4;HaplotypeScore=69.1662;InbreedingCoeff=0.9491;MQ=67.94;MQ0=0;MQRankSum=-0.853;QD=38.51;ReadPosRankSum=-3.023;VQSLOD=1.9298;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:72.25:0,72,1349	0/0:9,0:9:27.09:0,27,506	0/0:6,0:6:12.04:0,12,210	0/0:5,0:5:3.66:0,4,68	0/0:28,0:28:78.27:0,78,1457	0/0:25,0:25:75.22:0,75,1370	0/0:19,0:19:57.20:0,57,1068	1/1:1,21:22:63.20:908,63,0	0/0:15,0:15:45.15:0,45,843	0/0:32,0:32:96.25:0,96,1696	0/0:26,0:26:72.24:0,72,1319	0/0:20,0:20:60.21:0,60,1124	0/0:24,0:24:72.25:0,72,1348	0/0:21,0:21:60.21:0,60,1124	0/0:14,0:14:42.14:0,42,787	0/0:15,0:15:42.14:0,42,759	1/1:0,19:19:45.15:663,45,0	1/1:2,6:8:18.06:265,18,0	1/1:0,12:12:36.12:529,36,0	1/1:2,27:29:78.26:1148,78,0	1/1:1,14:15:36.12:530,36,0	0/0:18,0:18:54.19:0,54,1006	0/0:24,0:24:72.24:0,72,1311	0/0:8,0:8:24.08:0,24,450	0/0:30,0:30:90.31:0,90,1686	0/0:25,0:25:75.26:0,75,1405	0/0:34,0:34:99:0,102,1865	0/0:3,0:3:9.03:0,9,169
chr10	24801793	.	CGT	C	335.03	PASS	AB=0.934;AC=4;AF=0.071;AN=56;BaseQRankSum=6.154;DP=794;FS=11.711;HRun=0;HaplotypeScore=127.5759;InbreedingCoeff=-0.0805;MQ=63.95;MQ0=7;MQRankSum=-3.021;QD=4.09;ReadPosRankSum=-5.216;VQSLOD=-0.2065;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:58,3:61:99:0,153,3000	0/0:13,0:13:39.13:0,39,742	0/0:46,0:29:70.75:0,71,1462	0/0:39,1:29:32.34:0,32,1101	0/0:39,0:39:99:0,108,2126	0/0:23,0:23:66.11:0,66,1310	0/0:30,0:30:87.28:0,87,1674	0/1:29,16:44:99:397,0,1543	0/0:33,0:32:99:0,99,1973	0/0:33,0:33:99:0,99,1972	0/0:34,0:34:96.29:0,96,1818	0/0:34,0:34:99:0,99,1901	0/0:38,0:38:99:0,114,2254	0/0:30,0:30:90.31:0,90,1801	0/0:30,0:30:52.94:0,53,800	0/0:36,0:36:99:0,108,2079	0/1:15,0:16:13.98:14,0,432	0/0:8,0:7:8.50:0,8,168	0/1:13,0:13:6.73:7,0,572	0/0:19,0:19:11.77:0,12,151	0/0:16,0:16:5.95:0,6,122	0/0:22,0:22:20.92:0,21,1173	0/0:23,0:23:66.21:0,66,1272	0/0:23,0:23:69.24:0,69,1365	0/0:26,0:26:75.26:0,75,1515	0/0:25,0:25:72.24:0,72,1335	0/0:29,0:29:87.30:0,87,1721	0/1:8,0:8:19.95:20,0,343
chr10	24801798	.	T	TCACACACACA	6063.66	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=6.530;DP=839;FS=1.996;HRun=0;HaplotypeScore=239.1197;InbreedingCoeff=0.8284;MQ=61.81;MQ0=7;MQRankSum=-8.614;QD=26.95;ReadPosRankSum=-5.679;VQSLOD=3.1576;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:63,0:63:99:0,138,3793	0/0:13,0:13:36.12:0,36,1052	0/0:54,0:36:20.76:0,21,1129	0/1:44,0:31:9.24:9,0,718	0/0:36,0:36:81.28:0,81,2312	0/0:22,0:22:45.10:0,45,1345	0/0:29,0:29:75.26:0,75,2243	1/1:45,0:44:99:1803,99,0	0/0:32,0:31:90.31:0,90,2720	0/0:32,0:32:93.32:0,93,2593	0/0:33,0:33:87.30:0,87,2498	0/0:35,0:35:96.28:0,96,2594	0/0:36,0:37:99:0,102,2760	0/0:33,0:33:90.31:0,90,2635	1/1:3,0:34:42.14:1278,42,0	0/0:37,0:37:90.31:0,90,2646	1/1:6,9:21:20.99:931,21,0	1/1:5,4:8:3.48:153,3,0	1/1:5,10:20:54.14:1578,54,0	1/1:2,17:25:6.02:305,6,0	1/1:10,12:27:2.04:6,2,0	0/0:19,0:20:42.14:0,42,1157	0/0:23,0:23:54.19:0,54,1458	0/0:24,0:24:66.17:0,66,1783	0/0:26,0:26:48.16:0,48,1474	0/0:29,0:29:50.86:0,51,1686	0/0:28,0:28:75.26:0,75,2242	0/0:8,0:8:15.02:0,15,361
chr10	24803054	.	TA	T	1196.98	PASS	AB=0.511;AC=11;AF=0.204;AN=54;BaseQRankSum=9.443;DP=545;FS=12.422;HRun=2;HaplotypeScore=48.4121;InbreedingCoeff=0.8066;MQ=56.88;MQ0=18;MQRankSum=-6.030;QD=12.60;ReadPosRankSum=-1.006;VQSLOD=0.6362;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:36.12:0,36,539	0/0:7,0:7:21.07:0,21,314	0/0:23,0:7:11.06:0,11,186	0/0:17,0:2:3.01:0,3,43	0/0:23,0:23:60.20:0,60,899	0/0:31,1:31:78.25:0,78,1148	0/0:19,0:17:45.11:0,45,649	1/1:0,6:1:3.01:39,3,0	0/0:17,2:17:45.15:0,45,673	0/0:23,0:23:63.21:0,63,944	0/0:23,0:23:66.22:0,66,988	0/0:16,0:16:42.14:0,42,629	0/0:25,1:26:54.18:0,54,808	0/0:23,0:23:57.15:0,57,829	1/1:0,27:25:33.11:428,33,0	0/0:25,1:25:63.21:0,63,944	1/1:0,16:12:15.03:194,15,0	1/1:1,13:13:12.04:156,12,0	./.	0/1:1,23:24:2.84:463,0,3	1/1:0,8:8:6.02:77,6,0	0/0:23,0:23:63.17:0,63,919	0/0:27,0:27:75.25:0,75,1124	0/0:13,0:13:33.11:0,33,495	0/0:26,0:26:72.23:0,72,1079	0/0:26,0:26:78.26:0,78,1169	0/0:29,1:29:87.25:0,87,1276	0/0:7,0:7:18.06:0,18,270
chr10	24807293	.	T	TA	1453.81	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-5.706;DP=760;FS=1.355;HRun=1;HaplotypeScore=81.4127;InbreedingCoeff=0.9665;MQ=59.79;MQ0=3;MQRankSum=0.755;QD=36.35;ReadPosRankSum=2.033;VQSLOD=4.0610;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,38:40:99:1549,105,0	0/0:10,0:10:30.10:0,30,390	0/0:20,0:6:11.85:0,12,155	0/0:23,0:10:27.09:0,27,348	0/0:35,0:35:99:0,102,1322	0/0:40,0:40:99:0,117,1488	0/0:25,0:25:75.21:0,75,955	0/0:34,0:32:84.27:0,84,1090	0/0:22,0:22:66.21:0,66,856	0/0:23,0:23:69.22:0,69,883	0/0:9,0:9:27.09:0,27,351	0/0:27,0:27:81.21:0,81,1028	0/0:25,0:25:69.22:0,69,895	0/0:21,0:21:63.20:0,63,816	0/0:42,0:41:99:0,123,1597	0/0:22,0:22:63.20:0,63,818	0/0:37,0:37:99:0,108,1398	0/0:24,0:24:69.22:0,69,883	0/0:27,0:23:66.21:0,66,856	0/0:24,0:24:72.23:0,72,935	0/0:44,0:44:99:0,126,1636	0/0:27,0:27:72.23:0,72,935	0/0:20,0:20:57.18:0,57,736	0/0:27,0:27:72.23:0,72,932	0/0:22,0:22:66.21:0,66,857	0/0:34,0:34:99:0,102,1313	0/0:45,0:45:99:0,132,1713	0/0:11,0:11:33.11:0,33,428
chr10	24807547	.	C	CT	11574.04	PASS	AB=1.000;AC=39;AF=0.696;AN=56;BaseQRankSum=-16.125;DP=652;FS=11.772;HRun=8;HaplotypeScore=71.3059;InbreedingCoeff=0.9462;MQ=66.55;MQ0=0;MQRankSum=-0.833;QD=26.61;ReadPosRankSum=4.966;VQSLOD=4.6482;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,27:33:75.22:866,75,0	1/1:0,6:6:15.04:173,15,0	0/1:15,0:13:1.82:2,0,127	0/0:15,0:16:28.22:0,28,224	1/1:4,31:37:95.91:1053,96,0	1/1:2,34:36:99:1177,102,0	1/1:3,15:18:20.67:492,21,0	0/0:43,0:43:96.01:0,96,875	1/1:2,14:16:39.12:450,39,0	1/1:3,23:27:66.20:762,66,0	1/1:2,15:18:41.91:450,42,0	1/1:1,11:12:30.09:346,30,0	1/1:2,23:25:60.17:692,60,0	1/1:2,18:20:45.13:519,45,0	0/0:38,0:38:99:0,105,954	1/1:1,18:19:54.16:623,54,0	0/0:18,0:18:44.97:0,45,398	0/0:29,0:29:78.47:0,78,706	0/0:21,0:21:54.03:0,54,493	0/0:29,0:29:81.03:0,81,736	0/0:23,0:23:60.50:0,60,550	1/1:1,15:16:45.13:519,45,0	1/1:5,18:23:48.14:552,48,0	1/1:6,26:31:72.21:831,72,0	1/1:3,15:19:38.70:426,39,0	1/1:5,10:14:33.08:371,33,0	1/1:7,23:30:57.15:647,57,0	1/1:0,18:18:54.16:623,54,0
chr10	24807829	.	C	CA	11425.43	PASS	AB=0.625;AC=47;AF=0.839;AN=56;BaseQRankSum=4.874;DP=553;FS=5.854;HRun=9;HaplotypeScore=79.9647;InbreedingCoeff=0.8551;MQ=79.39;MQ0=0;MQRankSum=-2.280;QD=24.84;ReadPosRankSum=5.636;VQSLOD=5.1336;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,0:25:55.68:299,56,0	0/1:2,3:5:13.70:87,0,14	0/0:11,0:11:14.76:0,15,148	0/0:16,0:17:16.98:0,17,205	1/1:6,25:31:72.15:781,72,0	1/1:3,18:21:35.27:574,35,0	1/1:2,17:19:48.13:529,48,0	0/0:47,0:47:99:0,111,964	1/1:2,14:16:45.12:492,45,0	1/1:6,17:23:31.40:556,31,0	1/1:4,27:31:35.69:814,36,0	1/1:3,6:9:21.05:227,21,0	1/1:0,15:15:42.11:463,42,0	1/1:1,20:21:57.15:629,57,0	0/0:18,0:18:53.89:0,54,459	1/1:1,16:17:45.12:496,45,0	1/1:5,14:19:30.06:321,30,0	1/1:1,8:8:18.05:199,18,0	1/1:4,14:18:13.03:363,13,0	1/1:3,26:29:72.07:755,72,0	1/1:3,21:26:62.97:666,63,0	1/1:1,8:9:24.06:265,24,0	1/1:3,12:15:33.09:364,33,0	1/1:0,13:13:33.09:364,33,0	1/1:3,20:23:31.42:570,31,0	1/1:4,23:27:66.17:720,66,0	1/1:4,23:27:57.42:629,57,0	1/1:3,9:12:24.06:265,24,0
chr10	24807946	.	ACTT	A	869.25	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.419;DP=570;FS=0.854;HRun=0;HaplotypeScore=81.7787;InbreedingCoeff=0.9740;MQ=89.41;MQ0=0;MQRankSum=-4.054;QD=33.43;ReadPosRankSum=3.036;VQSLOD=4.2100;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:66.18:0,66,1410	0/0:6,0:6:18.03:0,18,352	0/0:22,0:22:60.21:0,60,1247	0/0:22,0:22:63.21:0,63,1250	0/0:27,0:27:81.28:0,81,1789	0/0:26,0:26:78.27:0,78,1721	0/0:18,0:18:42.14:0,42,928	0/0:45,0:45:99:0,126,2763	0/0:20,0:20:57.18:0,57,1196	0/0:20,0:20:51.17:0,51,1044	0/0:16,0:16:48.16:0,48,1060	0/0:13,0:13:36.11:0,36,732	0/0:23,0:23:69.24:0,69,1505	0/0:28,0:28:81.28:0,81,1746	1/1:0,26:26:60.20:964,60,0	0/0:27,0:27:78.27:0,78,1699	0/0:12,0:12:36.12:0,36,773	0/0:14,0:14:39.13:0,39,856	0/0:12,0:12:30.10:0,30,662	0/0:29,0:29:87.30:0,87,1916	0/0:22,0:22:63.20:0,63,1349	0/0:6,0:6:15.05:0,15,310	0/0:17,0:17:51.18:0,51,1126	0/0:23,0:23:66.23:0,66,1415	0/0:18,0:18:51.18:0,51,1126	0/0:21,0:21:60.21:0,60,1325	0/0:25,0:25:69.24:0,69,1501	0/0:9,0:9:24.07:0,24,468
chr10	24809378	.	A	ATGTTCTACCTAACAGCACAAAG	26240.71	PASS	AB=0.636;AC=53;AF=0.981;AN=54;BaseQRankSum=0.135;DP=266;FS=24.616;HRun=0;HaplotypeScore=327.7715;InbreedingCoeff=-0.0336;MQ=79.15;MQ0=0;MQRankSum=-2.503;QD=99.02;ReadPosRankSum=1.923;VQSLOD=3.3156;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,0:8:21.07:655,21,0	1/1:7,0:7:18.05:665,18,0	1/1:4,0:8:7.89:975,8,0	0/1:6,1:14:16.83:1722,0,17	1/1:8,0:8:21.07:615,21,0	1/1:15,0:15:30.10:1364,30,0	1/1:6,0:6:18.05:545,18,0	1/1:13,0:13:33.11:1219,33,0	1/1:14,0:14:36.12:1816,36,0	1/1:14,0:14:33.11:1321,33,0	1/1:14,0:14:39.13:1812,39,0	1/1:11,0:11:18.06:894,18,0	1/1:12,0:12:22.30:890,22,0	1/1:17,0:17:42.14:2030,42,0	1/1:10,0:11:18.06:879,18,0	1/1:6,0:7:15.05:841,15,0	1/1:9,0:9:21.04:929,21,0	./.	1/1:5,0:5:9.03:290,9,0	1/1:11,0:11:33.11:1357,33,0	1/1:6,0:6:12.92:154,13,0	1/1:7,0:8:15.05:923,15,0	1/1:7,0:7:15.05:577,15,0	1/1:5,0:5:12.04:736,12,0	1/1:7,0:7:15.03:340,15,0	1/1:12,0:12:30.10:1578,30,0	1/1:12,0:12:27.09:881,27,0	1/1:4,0:4:6.02:233,6,0
chr10	24809379	.	T	TGTTCTACCTAACAATGT	2483.97	PASS	AB=0.718;AC=26;AF=0.929;AN=28;BaseQRankSum=-2.348;DP=49;FS=2.722;HRun=0;HaplotypeScore=23.2633;InbreedingCoeff=-0.1940;MQ=140.45;MQ0=0;MQRankSum=-1.973;QD=65.37;ReadPosRankSum=-1.409;VQSLOD=2.6849;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	1/1:2,0:2:6.01:84,6,0	0/1:2,0:4:4.15:294,0,4	0/1:7,1:10:28.87:1067,0,29	./.	./.	1/1:2,0:2:6.01:72,6,0	1/1:2,0:2:6.02:104,6,0	./.	1/1:4,0:4:9.03:203,9,0	1/1:2,0:2:6.02:112,6,0	./.	./.	1/1:2,0:2:3.01:56,3,0	./.	./.	1/1:2,0:2:2.98:22,3,0	./.	./.	1/1:3,0:3:9.03:274,9,0	1/1:1,0:1:3.01:42,3,0	./.	./.	./.	1/1:1,0:1:2.99:23,3,0	1/1:2,0:2:6.02:160,6,0	1/1:1,0:1:3.01:57,3,0	./.
chr10	24810162	.	GT	G	1222.48	PASS	AB=0.808;AC=12;AF=0.214;AN=56;BaseQRankSum=7.863;DP=366;FS=5.198;HRun=11;HaplotypeScore=38.6836;InbreedingCoeff=0.8048;MQ=71.80;MQ0=0;MQRankSum=1.034;QD=12.87;ReadPosRankSum=0.090;VQSLOD=2.7634;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:13,0:13:0.47:0,0,191	0/0:8,0:8:18.04:0,18,191	0/0:11,0:8:12.03:0,12,125	0/0:13,0:10:5.98:0,6,53	0/0:17,1:18:14.44:0,14,352	0/0:20,0:21:56.97:0,57,584	0/0:8,0:8:24.06:0,24,255	0/0:21,0:22:48.58:0,49,505	0/0:14,0:14:36.08:0,36,376	0/0:14,0:14:36.09:0,36,384	0/0:12,0:12:27.07:0,27,288	0/0:9,0:9:21.05:0,21,224	0/0:19,0:19:48.12:0,48,512	0/0:14,0:14:33.07:0,33,344	1/1:4,10:14:26.96:222,27,0	0/0:7,0:7:18.05:0,18,192	1/1:2,13:16:37.99:301,38,0	1/1:0,13:12:26.97:222,27,0	1/1:1,13:14:38.87:310,39,0	0/1:6,10:16:5.04:170,0,5	1/1:1,8:9:20.97:172,21,0	0/0:4,0:4:6.02:0,6,64	0/0:10,0:11:21.04:0,21,217	0/0:6,0:6:18.05:0,18,192	0/0:11,0:11:24.06:0,24,256	0/0:17,0:18:47.94:0,48,487	0/0:23,0:23:57.09:0,57,579	0/0:8,0:8:20.97:0,21,223
chr10	24810631	.	ATC	A	117.22	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.165;DP=545;FS=1.586;HRun=0;HaplotypeScore=91.6740;InbreedingCoeff=0.9771;MQ=87.73;MQ0=0;MQRankSum=-2.760;QD=23.44;ReadPosRankSum=2.098;VQSLOD=4.0090;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:36.12:0,36,695	0/0:9,0:9:27.08:0,27,489	0/0:25,0:24:66.22:0,66,1178	0/0:15,0:15:25.88:0,26,650	0/0:24,0:24:72.25:0,72,1391	0/0:33,0:33:99:0,99,1893	0/0:14,0:14:39.12:0,39,711	0/0:34,0:33:99:0,99,1847	0/0:21,0:21:63.22:0,63,1217	0/0:21,0:21:63.22:0,63,1217	0/0:24,0:24:72.25:0,72,1391	0/0:25,0:25:75.26:0,75,1440	0/0:27,0:27:81.28:0,81,1564	0/0:13,0:13:39.13:0,39,753	1/1:0,5:5:15.05:206,15,0	0/0:23,0:23:66.23:0,66,1275	0/0:12,0:12:33.11:0,33,636	0/0:14,0:14:39.10:0,39,716	0/0:16,0:16:48.16:0,48,927	0/0:24,0:24:72.25:0,72,1370	0/0:16,0:16:48.16:0,48,927	0/0:18,0:18:54.19:0,54,1035	0/0:18,0:18:54.19:0,54,1035	0/0:18,0:18:54.19:0,54,1029	0/0:17,0:17:51.17:0,51,985	0/0:25,0:25:72.23:0,72,1357	0/0:31,0:31:93.32:0,93,1787	0/0:9,0:9:21.04:0,21,406
chr10	24810716	.	ATCT	A	704.57	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.792;DP=620;FS=3.514;HRun=0;HaplotypeScore=82.1728;InbreedingCoeff=0.9976;MQ=83.80;MQ0=0;MQRankSum=-2.077;QD=39.14;ReadPosRankSum=2.031;VQSLOD=4.6008;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:36.08:0,36,768	0/0:13,0:13:39.13:0,39,866	0/0:20,0:21:57.19:0,57,1177	0/0:18,0:18:48.10:0,48,954	0/0:32,0:32:96.33:0,96,2158	0/0:32,0:32:96.33:0,96,2176	0/0:15,0:15:45.15:0,45,1018	0/0:40,0:40:99:0,114,2573	0/0:22,0:22:60.21:0,60,1360	0/0:27,0:27:81.27:0,81,1733	0/0:19,0:19:54.19:0,54,1224	0/0:27,0:27:78.27:0,78,1767	0/0:36,0:36:99:0,99,2166	0/0:22,0:22:66.23:0,66,1492	1/1:0,18:18:48.16:799,48,0	0/0:25,0:25:75.26:0,75,1674	0/0:14,0:14:42.10:0,42,885	0/0:14,0:14:39.13:0,39,876	0/0:24,0:24:69.23:0,69,1438	0/0:30,0:30:90.27:0,90,1975	0/0:26,0:26:78.27:0,78,1724	0/0:19,0:19:57.20:0,57,1242	0/0:15,0:15:42.14:0,42,952	0/0:16,0:16:45.15:0,45,1020	0/0:26,0:26:75.25:0,75,1633	0/0:25,0:25:69.24:0,69,1529	0/0:24,0:21:69.24:0,69,1542	0/0:8,0:8:24.08:0,24,544
chr10	24811523	.	AAAAAC	A	2565.30	PASS	AB=0.654;AC=8;AF=0.143;AN=56;BaseQRankSum=10.045;DP=655;FS=9.859;HRun=0;HaplotypeScore=132.7855;InbreedingCoeff=0.6819;MQ=75.09;MQ0=1;MQRankSum=-7.974;QD=29.49;ReadPosRankSum=-0.450;VQSLOD=2.8593;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:81.27:0,81,2055	0/0:5,0:5:12.04:0,12,351	0/0:23,0:21:33.10:0,33,560	0/0:35,0:31:54.39:0,54,1174	0/0:48,0:48:99:0,123,3422	0/0:26,0:25:57.18:0,57,1539	0/0:15,0:15:36.12:0,36,1051	0/0:32,0:32:66.22:0,66,1770	0/0:18,0:18:33.11:0,33,964	0/0:27,0:27:75.23:0,75,1955	0/0:27,0:27:75.26:0,75,2120	0/0:22,0:22:60.20:0,60,1639	0/0:22,0:22:51.17:0,51,1400	0/0:26,0:26:60.20:0,60,1644	0/0:32,0:32:75.26:0,75,2137	0/0:32,0:32:78.23:0,78,2011	0/1:5,13:18:25.70:326,0,26	0/1:5,3:8:30.19:249,0,30	1/1:6,17:23:51.17:931,51,0	1/1:4,21:25:63.13:1074,63,0	1/1:5,8:13:8.99:136,9,0	0/0:14,0:14:36.12:0,36,997	0/0:23,0:23:48.16:0,48,1325	0/0:18,0:18:54.18:0,54,1425	0/0:21,0:21:60.16:0,60,1631	0/0:30,0:30:75.26:0,75,2092	0/0:32,0:32:87.26:0,87,2286	0/0:9,0:9:27.09:0,27,719
chr10	24812360	.	ATTCCCAGGGTCTCACAC	A	2138.60	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.502;DP=552;FS=1.019;HRun=0;HaplotypeScore=240.9408;InbreedingCoeff=0.9813;MQ=91.12;MQ0=0;MQRankSum=-6.461;QD=112.56;ReadPosRankSum=2.332;VQSLOD=3.3672;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:22:69.24:0,69,5119	0/0:5,0:5:15.05:0,15,1156	0/0:18,0:18:48.16:0,48,3111	0/0:28,0:28:75.22:0,75,4814	0/0:27,0:27:69.22:0,69,5371	0/0:32,0:32:93.32:0,93,7279	0/0:15,0:15:45.15:0,45,3368	0/0:25,0:25:66.21:0,66,4309	0/0:15,0:15:45.15:0,45,3489	0/0:20,0:20:60.21:0,60,4720	0/0:25,0:25:75.26:0,75,5780	0/0:19,0:19:48.16:0,48,3829	0/0:23,0:23:69.22:0,69,4906	0/0:15,0:15:42.14:0,42,3216	1/1:1,18:19:45.15:2233,45,0	0/0:19,0:19:57.20:0,57,4552	0/0:19,0:18:57.20:0,57,4384	0/0:14,0:14:39.13:0,39,3025	0/0:33,0:33:99:0,99,6752	0/0:22,0:22:66.23:0,66,5298	0/0:17,0:17:51.18:0,51,4251	0/0:8,0:8:24.07:0,24,1677	0/0:17,0:17:48.16:0,48,3844	0/0:13,0:13:39.13:0,39,2754	0/0:20,0:20:60.20:0,60,4479	0/0:22,0:22:66.23:0,66,5473	0/0:30,0:30:87.26:0,87,5814	0/0:9,0:9:27.09:0,27,2106
chr10	24812647	.	G	GA	14579.91	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-6.449;DP=524;FS=0.000;HRun=7;HaplotypeScore=46.0254;InbreedingCoeff=0.9398;MQ=74.63;MQ0=0;MQRankSum=-5.747;QD=29.39;ReadPosRankSum=4.024;VQSLOD=4.9018;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,16:17:36.11:435,36,0	1/1:1,8:9:24.07:290,24,0	0/0:21,0:21:41.69:0,42,364	0/0:7,0:6:12.01:0,12,113	1/1:2,30:32:78.24:939,78,0	1/1:3,16:19:48.15:580,48,0	1/1:1,13:14:33.10:398,33,0	1/1:5,27:32:55.26:926,55,0	1/1:3,12:15:30.09:362,30,0	1/1:3,24:28:75.09:874,75,0	1/1:2,26:28:78.24:940,78,0	1/1:4,12:16:36.11:427,36,0	1/1:1,16:17:42.13:507,42,0	1/1:0,12:12:30.09:362,30,0	1/1:1,22:23:54.17:652,54,0	1/1:1,22:23:51.16:616,51,0	1/1:2,12:14:30.09:362,30,0	1/1:1,10:12:33.03:380,33,0	1/1:2,18:20:31.19:637,31,0	1/1:2,32:34:96.18:1111,96,0	1/1:0,5:5:15.05:181,15,0	1/1:1,8:9:24.07:290,24,0	1/1:0,22:22:57.17:689,57,0	1/1:1,6:7:18.06:217,18,0	1/1:3,25:28:66.20:797,66,0	1/1:4,28:32:81.22:954,81,0	1/1:2,20:22:45.14:544,45,0	1/1:2,4:6:9.03:109,9,0
chr10	24813462	.	G	GTT	10757.73	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=9.433;DP=647;FS=11.578;HRun=9;HaplotypeScore=111.8202;InbreedingCoeff=0.9895;MQ=77.69;MQ0=5;MQRankSum=-0.122;QD=23.49;ReadPosRankSum=2.018;VQSLOD=3.0152;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,24:26:45.11:666,45,0	1/1:18,0:18:42.04:422,42,0	0/0:25,0:21:39.04:0,39,403	0/0:19,0:17:9.04:0,9,272	1/1:37,0:37:61.12:810,61,0	1/1:27,0:25:60.11:595,60,0	1/1:16,0:16:36.07:358,36,0	1/1:30,0:29:46.82:650,47,0	1/1:17,0:17:42.08:422,42,0	1/1:18,0:18:48.02:432,48,0	1/1:19,0:19:51.10:512,51,0	1/1:30,0:30:72.13:709,72,0	1/1:29,0:29:53.52:646,54,0	1/1:25,0:25:57.02:554,57,0	0/0:34,0:35:84.12:0,84,939	1/1:18,0:18:45.06:442,45,0	0/0:27,0:27:69.16:0,69,734	0/0:17,0:17:48.09:0,48,499	0/0:22,0:22:60.13:0,60,625	0/0:31,0:31:83.22:0,83,868	0/0:13,0:13:36.07:0,36,375	1/1:29,0:29:62.22:697,62,0	1/1:19,0:20:51.02:520,51,0	1/1:17,0:16:48.09:476,48,0	1/1:29,1:30:55.18:639,55,0	1/1:22,0:22:40.71:473,41,0	1/1:21,0:21:51.10:512,51,0	1/1:7,0:7:21.05:224,21,0
chr10	24813471	.	T	TTA	19661.92	PASS	AB=1.000;AC=39;AF=0.696;AN=56;BaseQRankSum=-12.655;DP=649;FS=13.445;HRun=0;HaplotypeScore=76.3333;InbreedingCoeff=0.9148;MQ=77.60;MQ0=5;MQRankSum=-1.580;QD=42.47;ReadPosRankSum=3.705;VQSLOD=5.5996;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:26:38.77:245,0,39	1/1:0,17:17:44.96:798,45,0	0/0:22,0:18:50.60:0,51,576	0/0:20,0:19:40.18:0,40,530	1/1:1,33:35:87.21:1581,87,0	1/1:0,23:21:60.21:1117,60,0	1/1:1,15:17:36.12:670,36,0	1/1:1,31:33:72.35:1481,72,0	1/1:0,16:16:42.14:781,42,0	1/1:0,19:20:60.13:961,60,0	1/1:0,17:17:51.17:943,51,0	1/1:0,28:29:71.92:1339,72,0	1/1:0,29:31:65.99:1181,66,0	1/1:0,25:27:57.18:1027,57,0	0/0:37,0:37:99:0,110,1436	1/1:1,18:20:45.15:821,45,0	0/0:24,0:24:69.23:0,69,983	0/0:16,0:16:48.12:0,48,661	0/0:24,0:24:69.13:0,69,872	0/0:29,0:29:87.28:0,87,1211	0/0:13,0:13:36.12:0,36,513	1/1:0,25:26:78.05:1334,78,0	1/1:1,23:24:50.86:944,51,0	1/1:0,18:18:48.16:889,48,0	1/1:1,25:27:66.06:1176,66,0	1/1:0,18:23:68.83:1035,69,0	1/1:0,24:24:51.17:949,51,0	1/1:0,7:7:21.07:390,21,0
chr10	24814195	.	T	TA	18458.56	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=0.635;DP=657;FS=2.473;HRun=7;HaplotypeScore=155.8626;InbreedingCoeff=0.9340;MQ=66.23;MQ0=0;MQRankSum=-5.390;QD=29.07;ReadPosRankSum=2.854;VQSLOD=2.8505;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,0:18:40.34:210,40,0	1/1:1,4:5:8.99:92,9,0	0/0:10,0:10:11.28:0,11,139	0/0:11,0:12:16.60:0,17,150	1/1:4,28:32:60.10:692,60,0	1/1:5,20:25:63.16:742,63,0	1/1:3,14:17:45.09:516,45,0	1/1:5,23:28:72.20:855,72,0	1/1:7,26:33:84.17:979,84,0	1/1:7,22:29:75.23:902,75,0	1/1:4,22:26:63.19:760,63,0	1/1:0,30:30:87.23:1035,87,0	1/1:5,24:29:69.18:818,69,0	1/1:2,29:31:87.23:1033,87,0	1/1:3,31:34:90.28:1087,90,0	1/1:6,21:27:40.20:752,40,0	1/1:1,15:16:42.12:496,42,0	1/1:0,20:20:51.16:611,51,0	1/1:1,16:17:45.07:502,45,0	1/1:4,33:37:96.29:1160,96,0	1/1:2,21:24:60.17:714,60,0	1/1:2,21:23:54.04:603,54,0	1/1:10,21:31:63.13:719,63,0	1/1:2,8:10:18.01:201,18,0	1/1:4,29:33:87.21:1014,87,0	1/1:2,21:23:66.20:797,66,0	1/1:4,25:29:84.24:1001,84,0	1/1:0,8:8:15.03:169,15,0
chr10	24814224	.	G	GA	16917.55	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=8.031;DP=642;FS=3.116;HRun=2;HaplotypeScore=150.8120;InbreedingCoeff=0.9950;MQ=62.15;MQ0=0;MQRankSum=-12.170;QD=39.71;ReadPosRankSum=1.527;VQSLOD=4.2925;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:42.11:0,42,502	1/1:0,10:10:30.10:423,30,0	0/0:9,0:9:27.08:0,27,335	0/0:14,0:14:38.61:0,39,455	1/1:4,32:36:99:1435,102,0	1/1:0,24:24:72.24:1027,72,0	1/1:3,8:11:27.09:386,27,0	0/0:41,0:41:99:0,111,1367	1/1:1,31:32:90.30:1285,90,0	1/1:1,23:24:69.23:989,69,0	1/1:1,25:26:75.25:1064,75,0	1/1:1,30:31:90.30:1275,90,0	1/1:3,25:28:75.25:1064,75,0	1/1:2,27:29:78.26:1103,78,0	0/0:31,0:31:81.23:0,81,990	1/1:1,30:31:90.30:1284,90,0	0/0:16,0:16:45.14:0,45,557	0/0:17,0:17:48.15:0,48,594	0/0:28,0:28:81.25:0,81,998	0/0:29,0:29:84.26:0,84,1040	0/0:15,0:15:42.13:0,42,521	1/1:1,18:19:57.19:807,57,0	1/1:2,22:24:69.19:956,69,0	1/1:2,11:13:30.10:429,30,0	1/1:4,29:33:87.29:1201,87,0	1/1:3,19:22:60.20:862,60,0	1/1:3,25:28:81.27:1158,81,0	1/1:2,3:5:12.04:169,12,0
chr10	24815284	.	CAT	C	1915.40	PASS	AB=1.000;AC=18;AF=0.409;AN=44;BaseQRankSum=-4.445;DP=201;FS=4.434;HRun=0;HaplotypeScore=40.3323;InbreedingCoeff=0.4653;MQ=71.22;MQ0=0;MQRankSum=3.263;QD=17.10;ReadPosRankSum=0.821;VQSLOD=3.1192;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:2,0:2:2.99:0,3,23	./.	0/1:16,0:8:3.92:4,0,69	0/0:9,0:5:4.56:0,5,41	0/0:3,0:7:2.67:0,3,12	0/0:4,0:6:4.25:0,4,29	./.	1/1:6,29:35:84.25:1019,84,0	0/0:3,0:6:6:0,6,53	0/0:3,0:3:3.01:0,3,41	0/1:4,0:4:0:0,0,0	0/0:7,0:7:3:0,3,25	0/0:1,0:2:2.99:0,3,24	1/1:7,0:7:2.60:10,3,0	1/1:2,2:4:6.02:74,6,0	0/0:3,0:4:3:0,3,26	1/1:1,13:14:24.08:295,24,0	1/1:2,13:15:24.08:295,24,0	1/1:2,7:9:21.05:245,21,0	1/1:4,2:6:6.02:74,6,0	1/1:0,2:2:3.01:37,3,0	./.	./.	0/0:1,0:1:3:0,3,29	./.	./.	0/0:4,0:4:0:0,0,0	0/0:11,0:17:3:0,3,26
chr10	24816285	.	C	CT	7974.03	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-15.833;DP=655;FS=4.251;HRun=1;HaplotypeScore=59.0924;InbreedingCoeff=0.9935;MQ=95.14;MQ0=0;MQRankSum=-1.418;QD=40.89;ReadPosRankSum=1.060;VQSLOD=5.4480;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,123,1533	0/0:7,0:7:21.05:0,21,257	0/0:31,0:31:83.54:0,84,996	0/0:29,0:29:68.92:0,69,854	0/0:22,0:22:66.21:0,66,856	0/0:33,0:33:99:0,99,1267	0/0:21,0:21:60.19:0,60,779	1/1:2,34:36:99:1486,105,0	0/0:19,0:19:57.12:0,57,692	0/0:24,0:24:72.23:0,72,921	0/0:17,0:17:51.12:0,51,632	0/0:21,0:21:63.17:0,63,784	0/0:24,0:24:72.23:0,72,922	0/0:23,0:23:60.19:0,60,779	1/1:1,32:33:93.30:1374,93,0	0/0:19,0:19:57.19:0,57,740	1/1:0,38:38:99:1484,99,0	1/1:0,11:11:27.09:404,27,0	1/1:1,26:26:78.25:1132,78,0	1/1:0,27:27:78.26:1169,78,0	1/1:3,20:23:63.20:925,63,0	0/0:19,0:19:57.16:0,57,712	0/0:24,0:24:69.22:0,69,888	0/0:18,0:18:51.17:0,51,662	0/0:20,0:20:57.16:0,57,723	0/0:23,0:23:63.20:0,63,818	0/0:20,0:20:60.17:0,60,762	0/0:4,0:4:12.01:0,12,139
chr10	24816573	.	G	GTTT	5590.90	PASS	AB=0.548;AC=47;AF=0.839;AN=56;BaseQRankSum=-1.918;DP=601;FS=2.632;HRun=9;HaplotypeScore=139.0656;InbreedingCoeff=0.3804;MQ=76.93;MQ0=0;MQRankSum=-5.238;QD=10.17;ReadPosRankSum=4.264;VQSLOD=1.2500;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:3,15:21:48.08:818,48,0	1/1:1,0:9:11.34:40,11,0	0/0:26,0:24:15:0,15,361	0/0:23,0:18:31.49:0,31,336	0/1:6,0:28:2.45:69,0,2	1/1:2,0:22:23.67:51,24,0	1/1:1,0:13:8.48:19,8,0	1/1:8,21:31:75.08:1136,75,0	1/1:1,0:18:18.69:40,19,0	1/1:0,0:20:29.94:93,30,0	1/1:3,0:17:19.19:58,19,0	1/1:3,0:14:12.46:27,12,0	1/1:3,0:29:26.16:56,26,0	0/1:3,0:27:11.02:25,0,11	1/1:2,15:17:36.12:710,36,0	1/1:0,0:13:14.95:32,15,0	1/1:6,0:34:64.01:485,64,0	1/1:3,0:16:29.89:230,30,0	1/1:7,1:25:53.43:449,53,0	1/1:0,1:18:50.78:420,51,0	1/1:0,2:20:44.87:417,45,0	0/1:4,0:24:13.50:24,0,14	1/1:3,0:19:22.38:92,22,0	1/1:2,0:22:23.67:52,24,0	1/1:1,0:24:27.17:96,27,0	0/1:6,0:31:0.83:86,0,1	1/1:4,0:22:16.20:35,16,0	0/1:3,0:16:20.70:30,0,21
chr10	24817288	.	T	TAA	13788.46	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=6.936;DP=631;FS=2.474;HRun=10;HaplotypeScore=99.2010;InbreedingCoeff=0.9984;MQ=73.73;MQ0=1;MQRankSum=-1.960;QD=32.52;ReadPosRankSum=2.419;VQSLOD=5.2479;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,23:25:51.17:761,51,0	1/1:1,9:10:18.06:268,18,0	0/0:22,0:22:25.86:0,26,335	0/0:16,0:16:36.03:0,36,357	1/1:2,22:26:66.05:870,66,0	1/1:5,14:21:36.11:504,36,0	1/1:1,15:16:42.14:627,42,0	0/0:28,0:28:60.98:0,61,605	1/1:2,18:22:47.23:664,47,0	1/1:4,13:18:39.13:581,39,0	1/1:3,23:28:65.66:887,66,0	1/1:4,15:20:44.64:636,45,0	1/1:5,21:26:57.19:851,57,0	1/1:2,21:23:56.68:815,57,0	0/0:27,0:27:63.10:0,63,640	1/1:6,16:23:45.15:673,45,0	0/0:27,0:27:72.10:0,72,721	0/0:13,0:13:33.04:0,33,327	0/0:24,0:26:57.79:0,58,607	0/0:32,0:33:80.57:0,81,844	0/0:15,0:15:42.09:0,42,427	1/1:3,18:22:51.17:746,51,0	1/1:2,22:25:56.68:815,57,0	1/1:1,15:16:48.16:712,48,0	1/1:2,20:24:45.15:670,45,0	1/1:3,22:26:69.21:1003,69,0	1/1:5,33:38:81.01:1199,81,0	1/1:0,12:14:36.11:504,36,0
chr10	24817571	.	GGT	G	14553.43	PASS	AB=1.000;AC=44;AF=0.786;AN=56;BaseQRankSum=-13.773;DP=509;FS=4.523;HRun=0;HaplotypeScore=86.2518;InbreedingCoeff=0.3935;MQ=71.34;MQ0=0;MQRankSum=-2.991;QD=29.88;ReadPosRankSum=3.872;VQSLOD=6.7995;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,11:11:30.10:486,30,0	1/1:0,11:11:30.06:453,30,0	0/0:12,0:11:33.01:0,33,534	0/0:5,0:5:15.05:0,15,303	1/1:0,26:26:62.63:941,63,0	1/1:0,16:16:39.13:632,39,0	1/1:1,13:14:13.53:467,14,0	0/1:38,0:38:78.82:79,0,498	1/1:0,17:17:39.13:632,39,0	1/1:0,14:14:42.13:659,42,0	1/1:0,20:20:54.18:855,54,0	1/1:0,18:18:45.15:730,45,0	1/1:0,27:27:75.24:1215,75,0	1/1:0,21:21:48.16:767,48,0	0/1:2,0:23:20.68:32,0,21	1/1:0,15:15:45.10:699,45,0	0/1:1,0:26:13.72:14,0,33	0/1:4,0:18:1.78:2,0,46	0/1:6,0:24:15.38:157,0,15	0/1:2,0:18:19.67:47,0,20	0/0:2,0:5:6.10:0,6,28	1/1:0,8:8:21.07:340,21,0	1/1:0,14:14:36.07:549,36,0	1/1:0,11:11:30.10:485,30,0	1/1:0,17:17:42.14:677,42,0	1/1:0,27:27:81.28:1305,81,0	1/1:0,27:27:72.03:1164,72,0	1/1:0,26:26:72.25:1165,72,0
chr10	24817854	.	GTC	G	2642.92	PASS	AB=0.552;AC=35;AF=0.625;AN=56;BaseQRankSum=3.490;DP=431;FS=3.578;HRun=0;HaplotypeScore=114.4299;InbreedingCoeff=0.6891;MQ=50.64;MQ0=26;MQRankSum=2.372;QD=12.29;ReadPosRankSum=4.913;VQSLOD=3.5585;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,3:13:2.70:39,3,0	1/1:2,6:8:9.03:120,9,0	0/0:18,0:6:13.26:0,13,147	0/0:10,0:5:2.80:0,3,31	1/1:5,10:14:6.02:80,6,0	1/1:2,7:7:6.02:73,6,0	1/1:5,12:15:23.87:294,24,0	0/0:38,0:33:81.21:0,81,1228	1/1:0,5:5:6.02:80,6,0	1/1:4,8:12:24.08:318,24,0	1/1:1,14:15:6.02:80,6,0	1/1:1,8:9:12.04:159,12,0	1/1:2,6:8:12.04:160,12,0	1/1:0,12:12:9.03:120,9,0	0/0:31,0:30:40.68:0,41,701	0/1:3,13:15:35.17:145,0,35	0/0:34,0:33:41.54:0,42,947	0/0:21,0:21:18.63:0,19,257	0/0:13,0:11:30.05:0,30,411	0/0:20,0:20:6.91:0,7,98	0/0:24,0:18:36.70:0,37,570	1/1:3,9:10:3.01:40,3,0	1/1:0,9:9:5.92:80,6,0	1/1:7,8:13:6.02:80,6,0	0/0:1,6:7:3.01:0,3,46	1/1:2,12:12:36.12:478,36,0	1/1:2,13:15:15.03:179,15,0	1/1:0,10:10:24.08:319,24,0
chr10	24817872	.	GTC	G	110.92	PASS	AB=0.926;AC=4;AF=0.077;AN=52;BaseQRankSum=-0.152;DP=555;FS=1.408;HRun=0;HaplotypeScore=215.7986;InbreedingCoeff=0.4314;MQ=42.84;MQ0=25;MQRankSum=0.900;QD=2.09;ReadPosRankSum=1.565;VQSLOD=2.0920;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:18:8.06:0,8,108	1/1:4,4:8:9.03:121,9,0	./.	./.	0/1:22,0:20:0.02:0,0,0	0/0:18,0:16:9.82:0,10,301	0/0:24,0:20:11.75:0,12,108	0/0:35,1:30:37.95:0,38,770	0/0:11,0:11:17.78:0,18,272	0/0:15,0:14:29.21:0,29,440	0/0:23,0:23:2.90:0,3,53	0/0:20,0:20:20.40:0,20,264	0/0:21,0:21:27.96:0,28,412	0/0:19,0:19:12.48:0,12,185	0/0:28,0:27:40.66:0,41,744	0/1:19,4:21:85.56:86,0,191	0/0:38,0:37:69.69:0,70,986	0/0:25,0:25:24.02:0,24,267	0/0:13,0:11:31.89:0,32,409	0/0:24,0:24:12.04:0,12,156	0/0:29,0:21:33.07:0,33,441	0/0:14,0:12:6.90:0,7,89	0/0:26,0:26:30.01:0,30,464	0/0:17,0:15:12.51:0,13,213	0/0:13,0:13:11.66:0,12,186	0/0:24,0:21:34.04:0,34,517	0/0:26,0:26:32.38:0,32,433	0/0:12,0:12:16.55:0,17,212
chr10	24817882	.	CTCTCTG	C	1928.90	PASS	AB=0.975;AC=22;AF=0.423;AN=52;BaseQRankSum=-8.406;DP=597;FS=2.272;HRun=0;HaplotypeScore=264.1377;InbreedingCoeff=-0.3238;MQ=41.93;MQ0=26;MQRankSum=3.748;QD=4.34;ReadPosRankSum=2.742;VQSLOD=2.4224;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:16:4.85:0,5,37	1/1:8,0:8:5.79:38,6,0	./.	./.	0/1:27,0:25:23.97:39,0,24	0/0:25,0:24:11.89:0,12,385	0/1:23,0:18:16.72:89,0,17	1/1:39,0:33:26.50:178,26,0	0/0:14,0:14:22.80:0,23,314	0/1:18,0:17:49.70:50,0,284	0/1:28,0:27:13.28:13,0,118	0/1:21,0:21:17.20:17,0,240	0/0:25,0:25:21.60:0,22,479	0/1:18,0:18:33.93:34,0,123	1/1:29,1:29:1.09:488,1,0	0/1:22,0:20:38.74:39,0,185	0/1:43,0:42:48.51:404,0,49	0/1:25,0:25:85.04:91,0,85	0/1:17,0:15:9.48:87,0,9	0/1:9,19:28:13.92:56,0,14	0/1:30,0:22:15.05:228,0,15	0/1:16,0:14:13.99:14,0,77	0/0:28,0:28:11.13:0,11,385	0/1:18,0:15:22.88:23,0,236	0/0:13,0:13:14.62:0,15,193	0/1:23,0:20:99:115,0,365	0/0:26,0:26:22.99:0,23,485	0/1:10,0:10:84.78:85,0,145
chr10	24817884	.	CTCTG	C	1682.04	PASS	AB=0.974;AC=20;AF=0.385;AN=52;BaseQRankSum=-7.018;DP=601;FS=0.000;HRun=0;HaplotypeScore=254.0229;InbreedingCoeff=-0.4545;MQ=41.94;MQ0=27;MQRankSum=3.124;QD=3.75;ReadPosRankSum=1.422;VQSLOD=1.5658;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:16:7.92:0,8,42	1/1:9,0:9:5.79:38,6,0	./.	./.	0/1:26,0:24:35.79:39,0,36	0/0:25,0:24:11.63:0,12,404	0/1:23,0:18:35.98:88,0,36	0/1:41,0:35:7.23:170,0,7	0/0:12,0:12:23.22:0,23,355	0/1:20,0:19:21.62:22,0,450	0/1:27,0:26:12.59:13,0,135	0/1:21,0:21:17.32:17,0,265	0/0:25,0:25:9.64:0,10,559	0/1:18,0:18:33.92:34,0,133	0/1:32,0:31:99:307,0,150	0/1:23,0:21:35.72:36,0,180	0/1:41,2:42:32.23:449,0,32	0/1:11,14:25:31.36:31,0,152	0/1:15,1:14:11.85:128,0,12	0/1:28,0:28:6.72:62,0,7	0/1:30,0:22:20.22:168,0,20	0/1:16,0:14:11.21:11,0,81	0/0:29,0:29:11.32:0,11,470	0/1:17,0:14:22.88:23,0,251	0/0:14,0:14:17.54:0,18,238	0/1:23,0:20:99:115,0,445	0/0:25,0:25:23.08:0,23,574	0/1:11,0:10:84.78:85,0,135
chr10	24817919	.	TCTCTCTCACA	T	3436.51	PASS	AB=0.951;AC=8;AF=0.143;AN=56;BaseQRankSum=-9.632;DP=730;FS=3.825;HRun=0;HaplotypeScore=321.8640;InbreedingCoeff=0.0522;MQ=46.03;MQ0=29;MQRankSum=3.566;QD=13.17;ReadPosRankSum=-5.735;VQSLOD=1.1596;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:19,0:14:2.04:2,0,2	0/0:9,0:9:15.05:0,15,221	0/0:25,0:10:27.09:0,27,466	0/0:38,0:11:27.09:0,27,577	0/0:34,0:33:29.86:0,30,501	0/0:38,0:37:60.62:0,61,1104	0/0:20,0:17:9.46:0,9,128	0/1:18,32:46:23.91:1271,0,24	0/0:23,0:23:35.57:0,36,606	0/0:26,0:25:68.69:0,69,1163	0/0:23,0:22:11.51:0,12,228	0/0:23,0:23:32.63:0,33,579	0/0:28,0:28:40.93:0,41,878	0/0:14,0:14:17.98:0,18,344	0/1:34,0:32:61.14:61,0,273	0/0:23,0:22:30.47:0,30,568	0/1:48,0:47:58.76:648,0,59	0/1:31,0:31:99:458,0,184	0/1:18,0:17:3.49:320,0,3	0/1:29,0:29:14.47:251,0,14	0/1:32,0:26:4.29:425,0,4	0/0:16,0:15:17.55:0,18,286	0/0:34,0:34:40.30:0,40,809	0/0:25,0:22:33.11:0,33,633	0/0:13,0:13:20.20:0,20,396	0/0:24,0:23:58.20:0,58,1069	0/0:25,0:25:51:0,51,1014	0/0:8,0:8:18.06:0,18,391
chr10	24817925	.	TCA	T	1841.31	PASS	AB=0.948;AC=9;AF=0.161;AN=56;BaseQRankSum=-9.815;DP=756;FS=10.938;HRun=0;HaplotypeScore=261.7044;InbreedingCoeff=0.3241;MQ=48.23;MQ0=27;MQRankSum=3.218;QD=8.18;ReadPosRankSum=-4.378;VQSLOD=0.8615;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:18:5.03:0,5,30	0/0:9,0:9:14.88:0,15,110	0/0:27,0:12:26.99:0,27,250	0/0:40,0:13:32.89:0,33,324	0/0:35,0:34:32.95:0,33,291	0/0:38,0:38:59.92:0,60,700	0/0:27,0:24:20.76:0,21,164	1/1:42,0:38:80.64:618,81,0	0/0:26,0:26:41.71:0,42,497	0/0:28,0:27:74.92:0,75,823	0/0:25,0:24:17.54:0,18,215	0/0:23,0:23:17.55:0,18,378	0/0:28,0:28:38.22:0,38,617	0/0:15,0:15:20.97:0,21,251	0/1:27,3:29:30.21:229,0,30	0/0:27,0:26:29.50:0,29,322	0/1:42,2:43:63.86:327,0,64	0/1:28,1:29:41.02:235,0,41	1/1:20,0:19:15.69:244,16,0	0/1:27,0:28:6.45:118,0,6	0/1:30,2:27:14.28:221,0,14	0/0:16,0:15:2.52:0,3,164	0/0:38,0:38:42.05:0,42,578	0/0:28,0:25:36.04:0,36,433	0/0:16,0:16:23.67:0,24,311	0/0:27,0:26:66.44:0,66,775	0/0:27,0:27:51.03:0,51,658	0/0:8,0:8:17.99:0,18,203
chr10	24818138	.	TC	T	994.85	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.940;DP=771;FS=11.084;HRun=1;HaplotypeScore=97.9742;InbreedingCoeff=0.9959;MQ=82.85;MQ0=0;MQRankSum=-1.747;QD=31.09;ReadPosRankSum=3.160;VQSLOD=2.2770;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,32:31:84.27:1090,84,0	0/0:8,0:8:24.07:0,24,353	0/0:21,0:21:57.12:0,57,839	0/0:28,0:27:78.23:0,78,1162	0/0:28,0:28:84.03:0,84,1179	0/0:33,0:33:96.31:0,96,1473	0/0:21,0:21:63.20:0,63,963	0/0:39,0:39:99:0,117,1791	0/0:36,0:36:99:0,108,1686	0/0:42,0:42:99:0,126,1853	0/0:21,0:21:63.20:0,63,952	0/0:25,0:25:72.23:0,72,1098	0/0:49,0:49:99:0,144,2172	0/0:30,0:30:90.28:0,90,1362	0/0:34,0:34:96.31:0,96,1477	0/0:33,0:33:99:0,99,1524	0/0:20,0:20:60.17:0,60,894	0/0:16,0:16:45.11:0,45,677	0/0:20,0:20:60.17:0,60,894	0/0:23,0:23:69.23:0,69,1076	0/0:35,0:35:99:0,105,1615	0/0:32,0:32:96.31:0,96,1465	0/0:22,0:22:60.14:0,60,909	0/0:29,0:29:84.27:0,84,1291	0/0:22,0:22:66.21:0,66,1010	0/0:32,0:32:96.28:0,96,1467	0/0:32,0:31:93.25:0,93,1414	0/0:8,0:8:23.99:0,24,322
chr10	24819498	.	G	GA	4226.86	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-13.048;DP=668;FS=13.500;HRun=9;HaplotypeScore=63.1461;InbreedingCoeff=0.9986;MQ=83.76;MQ0=0;MQRankSum=-2.226;QD=26.09;ReadPosRankSum=-0.333;VQSLOD=4.1779;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:95.97:0,96,833	0/0:11,0:11:26.98:0,27,234	0/0:26,0:26:49.97:0,50,398	0/0:21,0:20:29.76:0,30,240	0/0:20,0:20:53.96:0,54,465	0/0:25,0:25:65.97:0,66,573	0/0:19,0:19:50.98:0,51,443	1/1:6,18:24:57.14:618,57,0	0/0:16,0:17:29.02:0,29,240	0/0:26,0:26:65.97:0,66,571	0/0:32,0:32:68.96:0,69,599	0/0:29,0:29:74.96:0,75,647	0/0:23,0:23:65.99:0,66,573	0/0:21,0:21:53.97:0,54,465	1/1:2,22:24:57.15:631,57,0	0/0:28,0:28:77.98:0,78,677	1/1:3,23:26:72.15:777,72,0	1/1:0,11:11:21.06:232,21,0	1/1:4,18:23:56.90:575,57,0	1/1:5,34:40:99:1067,99,0	1/1:2,11:14:26.13:326,26,0	0/0:26,0:26:68.98:0,69,599	0/0:23,0:23:62.97:0,63,547	0/0:21,0:21:50.96:0,51,439	0/0:21,0:21:53.96:0,54,465	0/0:27,0:27:68.97:0,69,596	0/0:40,0:40:99:0,105,911	0/0:13,0:13:32.99:0,33,286
chr10	24820383	.	A	AT	11942.08	PASS	AB=1.000;AC=53;AF=0.946;AN=56;BaseQRankSum=-5.278;DP=433;FS=3.335;HRun=7;HaplotypeScore=41.3573;InbreedingCoeff=0.7896;MQ=69.26;MQ0=0;MQRankSum=-0.173;QD=28.71;ReadPosRankSum=3.806;VQSLOD=5.1971;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,12:14:39.11:459,39,0	1/1:1,6:7:18.06:217,18,0	0/0:17,0:13:21.20:0,21,163	0/1:9,0:8:0.66:1,0,39	1/1:2,35:37:99:1200,103,0	1/1:1,13:14:36.11:435,36,0	1/1:3,7:10:18.06:217,18,0	1/1:6,22:28:66.19:783,66,0	1/1:1,7:8:18.06:217,18,0	1/1:2,18:20:51.16:616,51,0	1/1:2,16:18:42.09:491,42,0	1/1:1,15:16:42.13:507,42,0	1/1:0,17:17:45.14:543,45,0	1/1:0,12:12:36.11:434,36,0	1/1:0,8:8:24.07:290,24,0	1/1:2,12:14:30.09:362,30,0	1/1:2,18:20:54.16:646,54,0	1/1:2,11:13:27.08:326,27,0	1/1:3,13:16:42.13:506,42,0	1/1:4,18:22:54.16:647,54,0	1/1:0,7:7:15.05:181,15,0	1/1:2,7:9:18.06:217,18,0	1/1:0,10:10:21.06:254,21,0	1/1:1,5:6:12.04:145,12,0	1/1:2,20:21:51.16:616,51,0	1/1:3,13:16:39.12:471,39,0	1/1:1,27:28:63.19:760,63,0	1/1:0,15:15:33.10:399,33,0
chr10	24820564	.	C	CAA	2422.62	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-3.134;DP=447;FS=2.794;HRun=11;HaplotypeScore=82.2757;InbreedingCoeff=0.9141;MQ=70.27;MQ0=0;MQRankSum=-1.683;QD=22.02;ReadPosRankSum=-1.453;VQSLOD=3.0927;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,0:11:18.02:170,18,0	0/0:6,0:8:8.93:0,9,131	0/0:20,0:17:1.79:0,2,102	0/0:11,0:6:6.79:0,7,40	0/0:30,0:30:74.84:0,75,699	0/0:24,0:24:57.04:0,57,552	0/0:10,0:12:20.68:0,21,236	1/1:9,0:15:17.24:211,17,0	0/0:15,0:16:38.77:0,39,361	0/0:14,0:15:26.69:0,27,244	0/0:17,0:20:19.09:0,19,364	0/0:15,0:16:38.75:0,39,355	0/0:20,0:22:52:0,52,476	0/0:7,0:8:8.84:0,9,124	1/1:1,5:8:20.50:214,20,0	0/0:14,0:15:32.69:0,33,287	1/1:3,19:22:36.12:522,36,0	1/1:0,8:10:26.06:321,26,0	1/1:3,11:16:38.53:449,39,0	1/1:5,14:21:50.45:572,50,0	1/1:1,4:6:14.53:167,15,0	0/0:8,0:11:9.55:0,10,121	0/0:18,0:18:51.08:0,51,494	0/0:7,0:7:21.03:0,21,204	0/0:19,0:19:51.06:0,51,495	0/0:19,0:18:41.99:0,42,407	0/0:26,0:30:77.28:0,77,754	0/0:14,0:14:36.06:0,36,349
chr10	24821530	.	TAC	T	3932.96	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=6.048;DP=336;FS=84.164;HRun=0;HaplotypeScore=67.7533;InbreedingCoeff=0.9204;MQ=73.97;MQ0=2;MQRankSum=0.748;QD=26.05;ReadPosRankSum=5.974;VQSLOD=0.9246;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:9.28:0,9,151	1/1:1,3:4:9.03:111,9,0	0/0:25,0:15:27.66:0,28,392	0/0:30,0:26:45.78:0,46,596	1/1:1,14:15:36.11:443,36,0	1/1:1,12:13:30.01:335,30,0	1/1:0,7:7:21.07:258,21,0	0/0:28,0:28:60.15:0,60,651	1/1:0,3:3:6.02:74,6,0	1/1:3,10:13:30.08:357,30,0	1/1:0,11:11:23.99:261,24,0	1/1:3,7:10:9.03:108,9,0	1/1:0,6:6:12.04:143,12,0	1/1:0,5:5:15.05:185,15,0	0/0:12,0:12:24.03:0,24,242	1/1:1,5:6:9.03:111,9,0	0/0:22,0:22:54.12:0,54,592	0/0:9,0:9:12.02:0,12,125	0/0:15,0:14:24.06:0,24,258	0/0:19,0:19:48.12:0,48,518	0/0:14,0:14:36.02:0,36,365	1/1:0,3:3:8.99:94,9,0	1/1:2,10:12:27.04:312,27,0	1/1:1,4:5:12.04:148,12,0	1/1:2,10:12:24.07:293,24,0	1/1:1,5:6:15.05:185,15,0	1/1:2,9:11:18.06:221,18,0	1/1:1,8:9:24.08:295,24,0
chr10	24821600	.	AACACACAC	A	1116.87	PASS	AB=0.892;AC=25;AF=0.781;AN=32;BaseQRankSum=-0.188;DP=203;FS=5.416;HRun=0;HaplotypeScore=60.0458;InbreedingCoeff=-0.0443;MQ=45.82;MQ0=12;MQRankSum=0.886;QD=9.15;ReadPosRankSum=-0.510;VQSLOD=1.0428;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:5:1.55:0,2,4	0/0:1,1:2:0.47:0,0,1	./.	./.	1/1:8,3:11:3.01:50,3,0	./.	1/1:2,1:3:2.97:24,3,0	1/1:29,0:29:7.43:85,7,0	1/1:4,0:4:9.01:126,9,0	0/1:6,0:7:10.97:74,0,11	./.	1/1:5,0:5:3:25,3,0	0/1:6,0:8:14.47:50,0,14	1/1:5,0:4:6:72,6,0	1/1:10,0:10:9.03:129,9,0	./.	1/1:6,0:11:2.15:66,2,0	0/1:7,0:7:53.18:115,0,53	1/1:8,0:10:12.04:274,12,0	1/1:6,0:6:3.48:65,3,0	./.	./.	./.	./.	./.	./.	./.	1/1:2,2:4:3.01:58,3,0
chr10	24821628	.	CACACACACACATATATATATATATAT	C	1824.23	PASS	AB=0.917;AC=20;AF=0.625;AN=32;BaseQRankSum=1.205;DP=154;FS=7.305;HRun=0;HaplotypeScore=100.3043;InbreedingCoeff=0.1232;MQ=36.32;MQ0=14;MQRankSum=1.587;QD=18.24;ReadPosRankSum=2.399;VQSLOD=1.2559;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:5:3.89:0,4,29	./.	./.	./.	1/1:5,0:5:3:25,3,0	./.	0/0:3,0:3:3.46:0,3,25	0/1:26,0:26:53.94:191,0,54	1/1:4,0:4:5.50:58,6,0	0/1:7,0:6:15.03:15,0,54	./.	0/1:5,0:5:0:0,0,0	0/0:7,0:7:0.96:0,1,84	1/1:4,0:3:2.99:23,3,0	1/1:1,8:9:9.03:596,9,0	./.	1/1:15,0:15:0.58:96,1,0	0/1:4,4:7:60.96:292,0,61	1/1:9,0:7:15.05:482,15,0	1/1:5,0:5:6.01:114,6,0	./.	./.	./.	./.	./.	0/0:1,0:1:2.97:0,3,20	./.	1/1:3,0:3:3.01:42,3,0
chr10	24821864	.	TC	T	11832.47	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=8.385;DP=559;FS=29.796;HRun=1;HaplotypeScore=56.8204;InbreedingCoeff=0.9826;MQ=86.60;MQ0=0;MQRankSum=-3.185;QD=38.29;ReadPosRankSum=4.386;VQSLOD=2.7684;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:78.27:0,78,1247	1/1:0,10:10:27.09:378,27,0	0/0:17,0:17:51.17:0,51,791	0/0:21,0:21:60.19:0,60,889	1/1:0,14:14:39.13:545,39,0	1/1:0,23:23:57.19:797,57,0	1/1:0,17:17:51.17:713,51,0	0/0:31,0:31:93.31:0,93,1466	1/1:0,22:22:57.19:797,57,0	1/1:0,22:22:66.17:884,66,0	1/1:0,8:8:24.08:336,24,0	1/1:0,14:14:39.13:546,39,0	1/1:0,24:24:69.23:965,69,0	1/1:0,31:31:84.28:1175,84,0	0/0:37,0:37:99:0,108,1723	1/1:0,23:23:66.22:923,66,0	0/0:36,0:36:99:0,108,1726	0/0:13,0:13:39.13:0,39,623	0/0:16,0:16:48.14:0,48,722	0/0:21,0:21:63.21:0,63,1007	0/0:32,0:32:96.33:0,96,1531	1/1:0,17:17:45.15:629,45,0	1/1:0,13:13:36.12:504,36,0	1/1:0,22:22:57.19:797,57,0	1/1:0,8:8:24.08:336,24,0	1/1:1,22:23:18.26:796,18,0	1/1:0,16:16:45.15:629,45,0	1/1:0,2:2:6.02:84,6,0
chr10	24823423	.	CT	C	755.06	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.878;DP=725;FS=2.626;HRun=5;HaplotypeScore=76.2306;InbreedingCoeff=0.9887;MQ=81.04;MQ0=0;MQRankSum=-3.887;QD=22.88;ReadPosRankSum=2.467;VQSLOD=2.7737;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:75.25:0,75,1023	0/0:6,0:6:18.06:0,18,241	0/0:38,0:37:89.12:0,89,1069	0/0:41,0:32:67.46:0,67,803	0/0:23,0:23:69.20:0,69,909	0/0:32,0:31:96.26:0,96,1289	0/0:26,0:26:72.23:0,72,968	0/0:41,0:41:99:0,117,1516	0/0:16,0:16:45.15:0,45,608	0/0:19,0:19:57.18:0,57,755	0/0:28,0:28:84.17:0,84,1076	0/0:20,0:20:57.17:0,57,751	0/0:30,0:30:87.25:0,87,1143	0/0:33,0:33:96.29:0,96,1278	1/1:1,32:33:75.21:850,75,0	0/0:29,0:29:75.23:0,75,996	0/0:24,0:24:66.12:0,66,862	0/0:14,0:15:21.78:0,22,436	0/0:23,0:23:60.14:0,60,774	0/0:22,0:22:60.16:0,60,769	0/0:21,0:21:57.19:0,57,778	0/0:19,0:19:54.16:0,54,708	0/0:22,0:22:60.19:0,60,804	0/0:21,0:21:63.20:0,63,845	0/0:40,0:40:99:0,111,1441	0/0:27,0:27:72.22:0,72,957	0/0:30,0:30:90.26:0,90,1195	0/0:19,0:19:50.64:0,51,648
chr10	24823865	.	AC	A	797.51	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=8.207;DP=709;FS=0.000;HRun=3;HaplotypeScore=71.7712;InbreedingCoeff=0.9899;MQ=71.27;MQ0=0;MQRankSum=-2.162;QD=33.23;ReadPosRankSum=1.556;VQSLOD=4.0119;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:96.30:0,96,1357	0/0:8,0:8:24.08:0,24,346	0/0:23,0:23:65.65:0,66,838	0/0:21,0:21:54.18:0,54,777	0/0:27,0:27:81.23:0,81,1110	0/0:26,0:26:61.23:0,61,1063	0/0:32,0:32:90.19:0,90,1233	0/0:23,0:23:60.19:0,60,847	0/0:28,0:28:81.20:0,81,1075	0/0:29,0:29:84.27:0,84,1177	0/0:19,0:19:57.18:0,57,801	0/0:30,0:30:90.28:0,90,1262	0/0:27,0:27:78.23:0,78,1084	0/0:33,0:33:93.31:0,93,1329	1/1:0,24:24:72.23:892,72,0	0/0:28,0:28:84.27:0,84,1191	0/0:34,0:34:93.23:0,93,1312	0/0:12,0:12:36.12:0,36,518	0/0:20,0:20:60.20:0,60,864	0/0:21,0:21:63.16:0,63,865	0/0:46,0:46:99:0,132,1898	0/0:16,0:16:48.15:0,48,672	0/0:16,0:16:48.16:0,48,689	0/0:35,0:35:99:0,105,1487	0/0:22,0:22:66.20:0,66,917	0/0:41,0:41:99:0,117,1644	0/0:28,0:28:83.87:0,84,1169	0/0:6,0:6:18.06:0,18,257
chr10	24826611	.	GA	G	2949.15	PASS	AB=1.000;AC=12;AF=0.214;AN=56;BaseQRankSum=12.474;DP=622;FS=0.000;HRun=6;HaplotypeScore=59.7466;InbreedingCoeff=0.8006;MQ=75.67;MQ0=0;MQRankSum=0.400;QD=20.92;ReadPosRankSum=-1.594;VQSLOD=2.5400;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:36.12:0,36,470	0/0:13,0:13:39.11:0,39,495	0/1:15,0:16:7.91:8,0,163	0/1:18,0:17:21.95:22,0,274	0/0:48,0:48:99:0,138,1748	0/0:25,0:25:63.20:0,63,822	0/0:21,0:21:54.17:0,54,693	0/0:19,0:19:51.13:0,51,627	0/0:17,0:17:51.12:0,51,634	0/0:28,0:28:75.24:0,75,969	0/0:27,0:27:72.23:0,72,939	0/0:25,0:25:72.14:0,72,906	0/0:21,0:21:60.20:0,60,784	0/0:15,0:15:42.12:0,42,535	0/0:22,0:22:66.19:0,66,833	0/0:17,0:17:51.15:0,51,651	1/1:1,24:25:63.16:676,63,0	1/1:0,19:19:51.13:547,51,0	1/1:1,22:23:66.13:685,66,0	1/1:1,30:31:90.23:966,90,0	1/1:1,8:9:21.05:225,21,0	0/0:25,0:25:75.24:0,75,980	0/0:24,0:24:66.21:0,66,860	0/0:19,0:19:51.17:0,51,664	0/0:24,0:24:69.16:0,69,857	0/0:26,0:26:78.24:0,78,1005	0/0:27,0:27:78.21:0,78,964	0/0:25,0:25:63.19:0,63,809
chr10	24827629	.	G	GA	15830.84	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-8.397;DP=550;FS=5.113;HRun=4;HaplotypeScore=61.0012;InbreedingCoeff=0.9907;MQ=76.10;MQ0=0;MQRankSum=-4.259;QD=32.84;ReadPosRankSum=5.240;VQSLOD=5.2456;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,26:28:66.22:902,66,0	1/1:1,10:11:27.09:369,27,0	0/0:20,0:19:14.85:0,15,460	0/0:15,0:15:30.94:0,31,321	1/1:3,24:29:72.20:957,72,0	1/1:3,23:27:66.22:900,66,0	1/1:2,19:21:42.14:574,42,0	1/1:4,23:28:75.24:999,75,0	1/1:0,15:15:36.12:492,36,0	1/1:3,16:19:51.17:694,51,0	1/1:1,17:18:39.13:533,39,0	1/1:1,13:14:33.11:451,33,0	1/1:1,15:16:36.12:492,36,0	1/1:3,10:13:24.08:328,24,0	0/0:33,0:33:99:0,99,1102	1/1:1,15:16:39.13:533,39,0	1/1:1,27:28:75.25:1025,75,0	1/1:0,14:14:39.13:531,39,0	1/1:1,14:15:42.14:574,42,0	1/1:0,27:27:75.21:1004,75,0	1/1:1,10:11:24.08:327,24,0	1/1:4,15:19:42.14:571,42,0	1/1:1,12:13:24.08:328,24,0	1/1:2,18:20:42.14:574,42,0	1/1:2,13:15:27.09:369,27,0	1/1:3,17:20:51.12:661,51,0	1/1:3,23:26:63.21:861,63,0	1/1:0,19:19:57.19:779,57,0
chr10	24827799	.	T	TG	244.75	PASS	AB=0.885;AC=4;AF=0.071;AN=56;BaseQRankSum=-4.661;DP=585;FS=0.000;HRun=10;HaplotypeScore=123.9238;InbreedingCoeff=-0.0435;MQ=75.05;MQ0=1;MQRankSum=1.098;QD=2.95;ReadPosRankSum=-2.369;VQSLOD=-0.0404;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:34:32.65:0,33,88	0/0:9,0:9:12.72:0,13,34	0/1:17,1:19:24.16:75,0,24	0/1:15,0:16:2.35:2,0,15	0/0:26,0:26:32.08:0,32,86	0/0:22,0:21:34.26:0,34,102	0/0:16,0:16:16.55:0,17,43	0/1:18,0:18:11.52:12,0,22	0/0:17,0:17:18.15:0,18,49	0/0:28,0:28:34.59:0,35,107	0/0:25,0:25:31.58:0,32,108	0/0:16,0:16:23.84:0,24,64	0/0:16,0:16:24.31:0,24,63	0/0:11,0:11:19.49:0,19,75	0/1:9,20:29:16.21:255,0,16	0/0:22,0:22:35.90:0,36,109	0/0:25,0:25:40.68:0,41,132	0/0:9,0:9:14.98:0,15,42	0/0:23,0:23:25.83:0,26,70	0/0:24,0:24:35.40:0,35,122	0/0:17,0:17:22.24:0,22,60	0/0:19,0:19:19.94:0,20,53	0/0:18,0:18:25.44:0,25,68	0/0:19,0:19:23.59:0,24,63	0/0:36,0:36:47.19:0,47,125	0/0:29,0:29:36.19:0,36,120	0/0:30,0:30:42.23:0,42,111	0/0:10,0:10:10.89:0,11,29
chr10	24827808	.	GGA	G	2613.01	PASS	AB=0.956;AC=41;AF=0.732;AN=56;BaseQRankSum=4.779;DP=572;FS=1.597;HRun=0;HaplotypeScore=114.9239;InbreedingCoeff=0.1968;MQ=71.97;MQ0=1;MQRankSum=-3.216;QD=5.10;ReadPosRankSum=7.655;VQSLOD=2.1790;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:36,0:37:70.80:496,71,0	1/1:8,0:8:10.88:27,11,0	0/0:18,0:18:28.05:0,28,513	0/0:13,0:12:35.59:0,36,331	1/1:25,1:26:41.55:194,42,0	1/1:26,1:26:6.33:116,6,0	0/1:15,1:16:6.42:57,0,6	0/1:17,0:17:35.29:146,0,35	1/1:16,0:16:11.83:31,12,0	1/1:24,0:24:17.76:174,18,0	0/1:27,0:27:10.06:41,0,10	1/1:15,1:16:21.67:88,22,0	1/1:16,1:17:28.12:138,28,0	0/1:13,1:14:20.58:130,0,21	0/0:29,0:29:54.05:0,54,668	0/1:20,1:21:0.63:75,0,1	0/1:24,1:25:21.23:76,0,21	1/1:7,2:9:14.06:105,14,0	0/1:15,2:17:13.83:126,0,14	0/1:21,0:21:52.70:53,0,60	1/1:19,2:21:21.83:125,22,0	1/1:17,1:18:17.94:80,18,0	1/1:21,0:21:19.65:49,20,0	1/1:21,0:21:20.37:49,20,0	1/1:31,1:32:40.80:136,41,0	0/1:20,2:22:16.51:113,0,17	1/1:28,1:29:35.82:138,36,0	1/1:9,0:9:9.33:23,9,0
chr10	24827809	.	GA	G	12361.88	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-5.010;DP=569;FS=8.620;HRun=3;HaplotypeScore=72.2740;InbreedingCoeff=0.9849;MQ=72.79;MQ0=1;MQRankSum=-2.808;QD=24.24;ReadPosRankSum=5.123;VQSLOD=3.5742;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,0:37:49.95:166,50,0	1/1:0,8:8:21.07:259,21,0	0/0:18,0:18:45.49:0,45,417	0/0:14,0:13:30.65:0,31,245	1/1:1,25:26:68.84:732,69,0	1/1:3,24:27:53.89:605,54,0	1/1:1,14:15:27:314,27,0	1/1:13,4:17:13.61:280,14,0	1/1:0,16:16:32.89:382,33,0	1/1:1,23:24:69.12:764,69,0	1/1:2,25:27:45.09:536,45,0	1/1:2,14:16:39.04:461,39,0	1/1:3,14:17:48.01:538,48,0	1/1:8,6:14:20.62:317,21,0	0/0:27,0:27:50.52:0,51,457	1/1:2,19:21:54.08:646,54,0	1/1:3,22:25:57.09:684,57,0	1/1:2,7:9:23.90:252,24,0	1/1:3,13:16:44.96:500,45,0	1/1:1,20:21:50.98:589,51,0	1/1:2,19:21:35.94:403,36,0	1/1:1,17:18:33.02:386,33,0	1/1:0,21:21:41.82:513,42,0	1/1:0,21:21:39.59:481,40,0	1/1:1,31:32:78.16:939,78,0	1/1:5,17:22:48.49:567,48,0	1/1:1,28:29:69.06:826,69,0	1/1:0,9:9:18.06:222,18,0
chr10	24828592	.	CAGAATT	C	28614.84	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=7.489;DP=527;FS=2.901;HRun=0;HaplotypeScore=141.1533;InbreedingCoeff=0.9424;MQ=64.36;MQ0=0;MQRankSum=-10.120;QD=59.49;ReadPosRankSum=0.078;VQSLOD=5.2782;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,8:11:21.07:462,21,0	1/1:0,10:10:30.10:675,30,0	0/0:10,0:10:27.09:0,27,897	0/0:14,0:14:36.11:0,36,1198	1/1:5,25:30:78.24:1666,78,0	1/1:1,26:27:75.26:1772,75,0	1/1:1,13:14:39.13:855,39,0	1/1:4,26:30:78.25:1696,78,0	1/1:3,17:20:51.17:1205,51,0	1/1:3,24:27:75.24:1688,75,0	1/1:2,11:13:30.10:709,30,0	1/1:6,16:22:51.15:1156,51,0	1/1:5,18:23:57.20:1321,57,0	1/1:2,17:19:54.19:1250,54,0	0/0:22,0:22:60.21:0,60,2116	1/1:1,23:24:69.24:1629,69,0	1/1:3,8:11:21.07:496,21,0	1/1:1,6:7:15.05:320,15,0	1/1:2,2:4:6.02:142,6,0	1/1:6,28:34:84.29:1984,84,0	1/1:2,5:7:12.04:283,12,0	1/1:1,17:18:54.16:1194,54,0	1/1:2,17:19:54.19:1273,54,0	1/1:2,8:10:21.96:498,22,0	1/1:3,26:29:72.25:1701,72,0	1/1:1,23:24:69.17:1487,69,0	1/1:6,34:40:99:2657,117,0	1/1:0,7:7:21.07:496,21,0
chr10	24828666	.	AT	A	10378.59	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=5.272;DP=501;FS=13.154;HRun=9;HaplotypeScore=86.0038;InbreedingCoeff=0.9500;MQ=74.07;MQ0=0;MQRankSum=-4.535;QD=22.66;ReadPosRankSum=1.169;VQSLOD=4.5591;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,7:9:20.95:182,21,0	1/1:1,10:11:29.97:266,30,0	0/0:13,0:13:19.01:0,19,225	0/0:9,0:9:18.05:0,18,212	1/1:7,27:34:69:631,69,0	1/1:5,11:16:36:325,36,0	1/1:3,6:8:24.01:219,24,0	1/1:8,29:37:87.02:791,87,0	1/1:2,13:15:39.01:357,39,0	1/1:5,19:24:60.03:549,60,0	1/1:2,22:24:34.34:559,34,0	1/1:1,15:16:45.02:412,45,0	1/1:2,19:21:54.03:494,54,0	1/1:0,18:18:54.03:494,54,0	0/0:21,0:21:60.18:0,60,692	1/1:2,12:14:36.02:329,36,0	1/1:1,22:23:63.03:576,63,0	1/1:1,13:14:38.99:349,39,0	1/1:3,9:12:27:247,27,0	1/1:3,28:31:75.02:686,75,0	1/1:0,3:3:6:55,6,0	1/1:4,18:22:51.02:467,51,0	1/1:1,18:19:44.98:411,45,0	1/1:1,5:6:14.96:129,15,0	1/1:4,11:15:39.02:357,39,0	1/1:5,16:21:51.02:467,51,0	1/1:3,29:32:83.91:759,84,0	1/1:0,12:12:29.97:266,30,0
chr10	24829308	.	A	AGTACCCAATGAAAAACAAT	1800.51	PASS	AB=0.741;AC=22;AF=0.917;AN=24;BaseQRankSum=-2.239;DP=30;FS=5.579;HRun=0;HaplotypeScore=29.2682;InbreedingCoeff=-0.2468;MQ=159.53;MQ0=0;MQRankSum=-1.173;QD=66.69;ReadPosRankSum=-0.036;VQSLOD=1.6772;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	1/1:1,0:1:3.01:90,3,0	0/1:2,0:5:68.26:379,0,68	0/1:5,1:6:29.25:483,0,29	1/1:1,0:1:3:25,3,0	./.	./.	./.	./.	./.	1/1:1,0:1:3:25,3,0	1/1:2,0:2:6.01:132,6,0	./.	./.	./.	./.	./.	./.	1/1:1,0:1:3.01:136,3,0	1/1:1,0:1:3.01:125,3,0	./.	1/1:1,0:1:2.99:24,3,0	1/1:2,0:2:6.02:224,6,0	./.	1/1:1,0:1:3.01:109,3,0	1/1:5,0:5:12.02:136,12,0	./.	./.
chr10	24829370	.	A	AT	7058.97	PASS	AB=1.000;AC=39;AF=0.696;AN=56;BaseQRankSum=-7.224;DP=413;FS=10.937;HRun=10;HaplotypeScore=45.7926;InbreedingCoeff=0.8914;MQ=47.20;MQ0=0;MQRankSum=-4.960;QD=21.85;ReadPosRankSum=0.392;VQSLOD=5.0663;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:23.93:0,24,197	1/1:0,5:5:12.03:128,12,0	0/1:2,0:3:0.03:0,0,22	0/0:6,0:6:17.20:0,17,130	1/1:6,26:33:57.14:607,57,0	1/1:0,13:13:36.09:384,36,0	1/1:1,9:10:27.03:275,27,0	1/1:6,9:15:30.08:320,30,0	1/1:1,16:17:42.07:436,42,0	1/1:5,12:16:14.45:359,14,0	1/1:4,14:17:14.47:359,14,0	1/1:2,17:19:26.46:475,26,0	1/1:1,17:18:48.12:511,48,0	1/1:4,13:17:33.04:339,33,0	0/0:14,0:14:32.94:0,33,271	1/1:3,23:26:41.50:635,41,0	0/0:8,0:8:20.96:0,21,172	0/0:4,0:4:11.99:0,12,99	0/0:8,0:8:20.96:0,21,172	0/0:36,0:38:88.89:0,89,720	0/0:1,0:1:3:0,3,25	1/1:4,11:16:21.36:207,21,0	1/1:5,13:18:8.37:270,8,0	1/1:2,3:5:9.49:97,9,0	1/1:4,15:19:37.22:350,37,0	1/1:1,14:16:41.94:430,42,0	1/1:8,18:27:53.97:557,54,0	1/1:0,11:11:30.08:320,30,0
chr10	24829720	.	C	CA	545.90	PASS	AB=0.945;AC=10;AF=0.179;AN=56;BaseQRankSum=2.214;DP=558;FS=4.215;HRun=2;HaplotypeScore=179.9872;InbreedingCoeff=0.0285;MQ=58.90;MQ0=2;MQRankSum=-3.566;QD=2.70;ReadPosRankSum=0.452;VQSLOD=-0.0599;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:35,0:36:48.24:449,48,0	0/0:6,0:6:10.76:0,11,53	0/0:28,0:17:44.74:0,45,486	0/0:20,0:17:20.84:0,21,288	0/1:18,1:19:24.37:24,0,98	0/0:17,0:16:2.02:0,2,110	0/1:20,1:21:39.89:40,0,80	0/1:21,0:21:0.98:1,0,59	0/0:19,0:16:6.40:0,6,108	0/0:26,1:26:15.15:0,15,146	0/1:16,2:17:38.38:38,0,66	0/0:19,0:18:25.11:0,25,127	0/1:24,1:24:23.77:24,0,159	0/1:26,3:27:95.82:96,0,136	0/0:18,0:18:37.56:0,38,309	0/0:24,0:24:28:0,28,170	0/0:27,0:27:72.22:0,72,869	0/0:12,0:12:21.39:0,21,280	0/0:22,0:22:48.77:0,49,496	0/0:25,0:25:62.57:0,63,690	0/0:12,0:12:33.07:0,33,385	0/1:16,1:17:2.30:2,0,89	0/1:15,1:16:11.17:11,0,47	0/0:12,0:12:13.22:0,13,57	0/0:15,0:14:18.95:0,19,84	0/0:23,0:22:12.59:0,13,75	0/0:19,0:19:32.99:0,33,155	0/0:9,0:9:15.19:0,15,60
chr10	24829724	.	AAC	A	895.63	PASS	AB=0.998;AC=24;AF=0.429;AN=56;BaseQRankSum=-3.043;DP=573;FS=1.311;HRun=0;HaplotypeScore=190.5385;InbreedingCoeff=-0.3528;MQ=59.93;MQ0=2;MQRankSum=-0.556;QD=1.93;ReadPosRankSum=-8.605;VQSLOD=0.1822;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:38,0:38:21.28:149,21,0	0/0:6,0:6:7.13:0,7,78	0/0:26,0:16:33.24:0,33,482	0/0:23,0:19:30.56:0,31,340	0/1:23,0:23:21.58:22,0,144	0/0:18,0:18:3.15:0,3,146	0/1:21,0:21:46.84:47,0,98	1/1:11,9:20:21.48:254,21,0	0/1:19,0:16:16.61:17,0,157	0/1:29,0:28:1.21:1,0,150	0/1:19,0:18:17.59:18,0,93	0/1:20,0:19:13.76:14,0,133	0/1:26,0:25:46.88:47,0,205	0/1:31,0:29:16.05:16,0,201	1/1:22,0:22:8.43:147,8,0	0/1:22,0:22:16.87:17,0,194	0/1:29,1:30:25.14:25,0,294	0/0:11,0:11:3.34:0,3,93	0/1:23,0:23:21.77:22,0,136	0/1:28,0:28:29.81:30,0,252	0/0:10,0:10:29.58:0,30,196	0/1:16,0:16:33.21:33,0,105	0/1:14,0:14:52.05:59,0,52	0/1:12,0:12:13.25:13,0,59	0/0:16,0:15:3.60:0,4,86	0/1:22,0:21:49.69:82,0,50	0/1:19,0:19:31.53:32,0,149	0/1:9,0:9:17.13:17,0,55
chr10	24829730	.	A	AC	951.59	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=1.332;DP=570;FS=3.099;HRun=0;HaplotypeScore=185.8265;InbreedingCoeff=0.6302;MQ=63.96;MQ0=2;MQRankSum=-2.924;QD=15.86;ReadPosRankSum=3.327;VQSLOD=4.7060;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,22:38:83.90:1041,84,0	0/0:6,0:6:15.03:0,15,170	0/0:25,0:17:33.95:0,34,422	0/0:23,0:18:32.59:0,33,306	0/0:24,0:24:34.35:0,34,525	0/0:19,0:19:51.52:0,52,547	0/0:23,0:23:44.45:0,44,496	0/0:19,0:19:42.15:0,42,412	0/0:19,0:16:42.08:0,42,456	0/0:31,0:31:83.05:0,83,799	0/0:18,0:17:13.18:0,13,326	0/0:18,0:17:47.96:0,48,483	0/0:27,0:26:39.25:0,39,583	0/0:31,0:29:29.34:0,29,601	0/1:22,0:22:15.22:15,0,150	0/0:20,0:20:52.02:0,52,558	0/0:30,0:30:79.81:0,80,911	0/0:14,0:14:35.87:0,36,353	0/0:23,0:23:18.10:0,18,495	0/0:25,0:25:75.05:0,75,846	0/0:10,0:10:30.10:0,30,388	0/0:15,0:15:29.40:0,29,392	0/0:13,0:13:29.48:0,29,318	0/0:12,0:12:24.86:0,25,240	0/0:13,0:12:32.93:0,33,336	0/0:22,0:21:62.70:0,63,554	0/0:21,0:21:51.08:0,51,549	0/0:9,0:9:27:0,27,267
chr10	24829762	.	A	AG	20919.94	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-2.222;DP=581;FS=18.642;HRun=1;HaplotypeScore=105.2459;InbreedingCoeff=0.9937;MQ=83.03;MQ0=0;MQRankSum=-8.149;QD=40.62;ReadPosRankSum=3.995;VQSLOD=2.9407;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,26:30:60.20:898,60,0	1/1:0,7:7:18.06:269,18,0	0/0:23,0:22:34.13:0,34,598	0/0:19,0:18:44.98:0,45,540	1/1:1,29:30:81.27:1214,81,0	1/1:0,25:25:63.21:944,63,0	1/1:0,18:17:51.17:764,51,0	1/1:5,24:29:75.25:1117,75,0	1/1:1,18:18:48.16:707,48,0	1/1:2,24:26:75.25:1124,75,0	1/1:0,25:25:75.25:1121,75,0	1/1:0,21:21:60.20:897,60,0	1/1:1,20:21:60.20:897,60,0	1/1:2,25:27:75.25:1123,75,0	0/0:24,0:24:57.19:0,57,740	1/1:0,17:17:51.17:764,51,0	1/1:1,28:29:81.24:1190,81,0	1/1:1,9:10:27.09:402,27,0	1/1:4,17:21:57.17:825,57,0	1/1:0,35:35:99:1528,102,0	1/1:1,13:14:39.13:584,39,0	1/1:1,12:13:36.12:539,36,0	1/1:2,14:16:42.06:599,42,0	1/1:0,16:16:45.15:674,45,0	1/1:0,20:20:57.19:854,57,0	1/1:0,17:17:48.16:719,48,0	1/1:0,23:23:60.20:897,60,0	1/1:0,6:6:18.06:270,18,0
chr10	24830399	.	CA	C	9456.39	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-1.699;DP=522;FS=2.681;HRun=8;HaplotypeScore=57.9402;InbreedingCoeff=0.9805;MQ=72.29;MQ0=0;MQRankSum=0.066;QD=25.42;ReadPosRankSum=2.613;VQSLOD=5.7533;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:8:24.05:0,24,276	1/1:2,6:8:15.02:145,15,0	0/0:10,0:10:27.07:0,27,304	0/0:5,0:5:5.97:0,6,44	1/1:2,29:32:89.12:836,89,0	1/1:0,19:19:54.09:521,54,0	1/1:1,10:11:30.05:290,30,0	0/0:17,0:17:48.15:0,48,580	1/1:0,8:8:21.03:203,21,0	1/1:1,28:29:84.10:799,84,0	1/1:5,24:29:66.09:637,66,0	1/1:1,15:16:36.06:348,36,0	1/1:1,19:20:51.08:492,51,0	1/1:0,17:17:51.08:492,51,0	0/0:17,0:17:45.14:0,45,544	1/1:0,14:14:39.06:377,39,0	0/0:18,0:18:51.16:0,51,613	0/0:20,0:20:45.13:0,45,531	0/0:10,0:10:30.09:0,30,362	0/0:31,0:31:87.27:0,87,1051	0/0:14,0:14:39.10:0,39,458	1/1:3,15:18:45.07:434,45,0	1/1:1,26:27:69.02:666,69,0	1/1:1,10:11:30.05:290,30,0	1/1:1,25:26:69.11:666,69,0	1/1:3,29:32:87.14:840,87,0	1/1:3,39:42:99:1072,111,0	1/1:0,13:13:36.06:348,36,0
chr10	24830500	.	C	CA	1444.12	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-6.508;DP=478;FS=8.735;HRun=9;HaplotypeScore=46.2778;InbreedingCoeff=0.9912;MQ=78.41;MQ0=0;MQRankSum=-0.379;QD=20.63;ReadPosRankSum=-0.164;VQSLOD=3.5814;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:7:21:0,21,182	0/0:12,0:12:35.99:0,36,313	0/0:12,0:13:28.08:0,28,227	0/0:12,0:12:21.45:0,21,180	0/0:24,0:24:53.95:0,54,463	0/0:18,0:20:37.98:0,38,314	0/0:11,0:11:24.47:0,24,209	0/0:28,0:28:71.96:0,72,622	0/0:18,0:18:50.97:0,51,439	0/0:13,0:13:29.98:0,30,259	0/0:23,0:23:62.98:0,63,547	0/0:16,0:17:47.02:0,47,394	0/0:22,0:23:62.02:0,62,524	0/0:24,0:24:59.94:0,60,515	0/0:26,0:26:68.94:0,69,588	0/0:14,0:14:35.99:0,36,313	1/1:1,9:11:26.91:280,27,0	1/1:2,10:12:21.06:231,21,0	1/1:2,12:14:36.09:391,36,0	1/1:7,20:27:33.93:550,34,0	1/1:0,6:6:15.04:166,15,0	0/0:9,0:9:23.99:0,24,208	0/0:25,0:25:62.97:0,63,544	0/0:8,0:9:22.99:0,23,179	0/0:22,0:22:65.98:0,66,570	0/0:17,0:17:47.98:0,48,414	0/0:29,0:29:86.97:0,87,752	0/0:12,0:12:32.99:0,33,286
chr10	24830742	.	T	TA	14306.66	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-7.975;DP=516;FS=0.643;HRun=5;HaplotypeScore=47.8512;InbreedingCoeff=0.9525;MQ=76.34;MQ0=0;MQRankSum=-3.212;QD=30.64;ReadPosRankSum=1.580;VQSLOD=5.1549;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,22:22:51.16:655,51,0	1/1:0,5:5:14.96:171,15,0	0/0:9,0:9:14.65:0,15,113	0/0:13,0:13:9.30:0,9,201	1/1:2,29:31:87.10:1058,87,0	1/1:3,22:25:57.19:732,57,0	1/1:3,16:19:39.13:498,39,0	1/1:6,26:32:78.21:961,78,0	1/1:4,16:20:36.12:462,36,0	1/1:1,11:12:30.08:369,30,0	1/1:3,25:28:66.09:803,66,0	1/1:2,20:22:54.18:694,54,0	1/1:1,17:18:48.16:616,48,0	1/1:1,15:16:45.15:577,45,0	0/0:26,0:26:55.79:0,56,726	1/1:1,19:20:48.16:617,48,0	1/1:1,17:18:42.11:522,42,0	1/1:1,7:7:18:211,18,0	1/1:3,11:14:33.07:384,33,0	1/1:4,22:26:66.10:808,66,0	1/1:0,9:9:24.08:308,24,0	1/1:3,9:12:24.08:308,24,0	1/1:1,23:25:63.17:792,63,0	1/1:1,5:6:12.04:154,12,0	1/1:2,18:20:51.16:651,51,0	1/1:0,20:20:57.16:704,57,0	1/1:2,22:24:60.08:769,60,0	1/1:0,15:15:39.07:481,39,0
chr10	24831588	.	C	CCT	2444.54	PASS	AB=0.556;AC=23;AF=0.411;AN=56;BaseQRankSum=0.234;DP=536;FS=3.203;HRun=0;HaplotypeScore=95.7129;InbreedingCoeff=-0.2226;MQ=64.33;MQ0=6;MQRankSum=-0.991;QD=6.81;ReadPosRankSum=6.469;VQSLOD=2.9535;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:4,1:27:27.88:231,0,28	0/1:2,0:8:36.87:43,0,37	0/0:18,0:10:26.42:0,26,263	0/0:12,0:10:23.13:0,23,323	1/1:4,0:28:21.03:280,21,0	0/1:2,0:17:37.56:104,0,38	0/1:2,0:17:3.11:91,0,3	0/0:5,0:28:18.23:0,18,219	0/1:2,0:16:17.85:152,0,18	0/1:3,0:14:52.82:112,0,53	0/1:4,0:17:43.42:157,0,43	0/1:3,0:17:13.01:155,0,13	0/1:5,0:14:47.23:89,0,47	0/1:6,0:19:72.19:72,0,126	0/0:9,0:10:30.08:0,30,411	0/1:3,0:12:12.46:71,0,12	0/0:3,0:30:55.63:0,56,237	0/0:5,0:28:53.08:0,53,200	0/1:4,0:16:2.38:2,0,137	0/0:10,0:36:10.90:0,11,297	0/0:3,0:14:28.98:0,29,137	0/1:2,0:14:54.06:78,0,54	0/1:7,0:26:99:162,0,120	0/1:2,0:16:30.36:84,0,30	1/1:1,0:12:4.68:137,5,0	0/1:5,0:24:74.39:192,0,74	0/1:3,0:25:36.43:223,0,36	1/1:1,0:17:22.28:181,22,0
chr10	24834986	.	C	CA	13319.19	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-2.996;DP=430;FS=1.234;HRun=5;HaplotypeScore=58.6190;InbreedingCoeff=0.9325;MQ=65.85;MQ0=0;MQRankSum=-4.729;QD=32.57;ReadPosRankSum=3.379;VQSLOD=5.3890;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,15:16:39.13:513,39,0	1/1:0,6:6:15.05:197,15,0	0/0:10,0:9:15.45:0,15,179	0/0:11,0:9:10.54:0,11,124	1/1:3,35:38:99:1369,105,0	1/1:0,19:19:54.18:710,54,0	1/1:1,13:14:33.11:434,33,0	1/1:6,24:30:72.20:904,72,0	1/1:0,11:11:30.10:394,30,0	1/1:3,22:25:63.20:825,63,0	1/1:1,13:14:35.88:473,36,0	1/1:2,12:14:33.11:434,33,0	1/1:1,15:16:45.15:591,45,0	1/1:2,15:17:42.14:547,42,0	1/1:3,10:13:24.08:316,24,0	1/1:2,13:15:27.09:355,27,0	1/1:3,14:17:42.14:550,42,0	1/1:1,11:12:27.09:355,27,0	1/1:2,17:19:51.12:637,51,0	1/1:1,12:13:24.07:302,24,0	1/1:0,11:11:21.07:276,21,0	1/1:0,4:4:12.04:158,12,0	1/1:1,12:13:33.11:434,33,0	1/1:0,7:7:15.05:197,15,0	1/1:0,21:21:63.20:829,63,0	1/1:2,18:20:57.17:733,57,0	1/1:4,9:13:30.10:390,30,0	1/1:0,11:11:30.06:394,30,0
chr10	24835184	.	CAGTCCTGGCAGGACCA	C	20901.70	PASS	AC=50;AF=0.926;AN=54;BaseQRankSum=5.242;DP=294;FS=0.823;HRun=0;HaplotypeScore=192.8697;InbreedingCoeff=0.6312;MQ=60.65;MQ0=0;MQRankSum=-7.672;QD=78.58;ReadPosRankSum=6.151;VQSLOD=4.3303;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,10:18:18.06:849,18,0	./.	0/0:10,0:10:30.10:0,30,1619	0/0:18,0:18:41.73:0,42,1860	1/1:1,11:12:15.05:710,15,0	1/1:6,11:17:27.09:1274,27,0	1/1:5,11:16:27.09:1276,27,0	1/1:2,6:8:18.04:618,18,0	1/1:1,12:13:33.11:1561,33,0	1/1:1,11:12:30.06:1028,30,0	1/1:0,3:3:3.01:142,3,0	1/1:1,7:8:18.53:852,19,0	1/1:3,14:17:39.13:1845,39,0	1/1:3,14:18:36.12:1693,36,0	1/1:2,5:7:15.05:709,15,0	1/1:1,8:9:24.08:1135,24,0	1/1:4,4:8:9.02:426,9,0	1/1:7,5:12:9.03:426,9,0	1/1:6,8:14:24.06:1016,24,0	1/1:3,5:8:6.02:284,6,0	1/1:2,4:6:6.02:233,6,0	1/1:0,3:3:6.02:284,6,0	1/1:1,1:2:3.01:142,3,0	1/1:2,5:7:6.02:284,6,0	1/1:7,5:12:15.05:709,15,0	1/1:2,13:15:36.12:1703,36,0	1/1:6,9:15:27.09:1277,27,0	1/1:2,4:6:9.03:426,9,0
chr10	24835379	.	TATC	T	15805.89	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=1.986;DP=384;FS=16.775;HRun=0;HaplotypeScore=97.1971;InbreedingCoeff=0.8906;MQ=76.51;MQ0=0;MQRankSum=-7.499;QD=44.03;ReadPosRankSum=3.793;VQSLOD=5.7136;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,19:20:45.15:767,45,0	1/1:0,10:10:27.09:460,27,0	0/0:13,0:13:33.11:0,33,624	0/0:12,0:12:27.09:0,27,550	1/1:0,25:24:69.24:1174,69,0	1/1:2,15:17:45.15:766,45,0	1/1:0,13:13:33.11:562,33,0	1/1:1,21:22:63.15:1003,63,0	1/1:1,11:12:27.09:460,27,0	1/1:2,21:23:57.20:968,57,0	1/1:1,21:22:60.21:1022,60,0	1/1:0,8:8:24.08:409,24,0	1/1:0,12:12:36.12:613,36,0	1/1:0,11:11:27.09:460,27,0	1/1:1,13:14:36.12:613,36,0	1/1:1,4:5:12.04:204,12,0	1/1:0,11:11:27.05:429,27,0	1/1:1,17:18:45.15:767,45,0	1/1:4,16:20:48.16:818,48,0	1/1:0,11:11:30.10:511,30,0	1/1:0,2:2:3.01:51,3,0	1/1:0,7:7:21.07:358,21,0	1/1:1,7:8:21.07:357,21,0	1/1:1,10:11:21.03:327,21,0	1/1:1,20:21:60.21:1021,60,0	1/1:1,15:16:45.15:767,45,0	1/1:0,14:14:36.12:613,36,0	1/1:0,6:6:18.06:307,18,0
chr10	24835510	.	T	TGC	2180.88	PASS	AB=0.977;AC=38;AF=0.679;AN=56;BaseQRankSum=7.788;DP=487;FS=1.091;HRun=0;HaplotypeScore=176.2848;InbreedingCoeff=0.0104;MQ=51.79;MQ0=2;MQRankSum=-8.677;QD=5.52;ReadPosRankSum=4.645;VQSLOD=3.1367;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:27:11.15:30,0,11	1/1:5,0:5:4.74:16,5,0	0/0:33,0:24:56.41:0,56,701	0/0:30,0:27:65.51:0,66,897	0/0:9,0:7:2.33:0,2,24	0/0:20,0:20:4.13:0,4,47	0/1:18,0:18:14.17:14,0,16	0/1:29,0:25:99:174,0,198	1/1:18,0:18:17.10:61,17,0	0/1:25,0:25:96.57:132,0,97	0/1:7,0:7:1.81:2,0,18	1/1:26,0:26:2.53:78,3,0	0/1:19,0:19:46.10:50,0,46	1/1:15,0:15:10.15:44,10,0	1/1:15,0:15:0.51:51,1,0	0/1:9,0:9:29.08:39,0,29	1/1:3,16:19:6.57:336,7,0	1/1:5,15:20:47.37:707,47,0	1/1:8,3:11:0.63:144,1,0	0/1:12,5:17:4.61:112,0,5	1/1:3,14:17:0.12:139,0,0	0/1:7,0:7:5.21:5,0,33	1/1:10,0:10:8.70:37,9,0	1/1:15,0:15:3.38:11,3,0	1/1:25,0:25:6.73:36,7,0	0/1:20,0:20:73.42:73,0,122	1/1:18,0:18:6.81:22,7,0	1/1:3,0:3:2.99:24,3,0
chr10	24835514	.	T	TGTGCGCGC	8812.70	PASS	AB=0.993;AC=47;AF=0.839;AN=56;BaseQRankSum=5.382;DP=474;FS=11.455;HRun=0;HaplotypeScore=174.0728;InbreedingCoeff=0.1877;MQ=52.73;MQ0=2;MQRankSum=-7.719;QD=21.60;ReadPosRankSum=4.414;VQSLOD=3.2654;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:26:30.04:224,0,30	1/1:5,0:5:6.02:195,6,0	0/0:36,0:27:64.41:0,64,1234	0/0:30,0:27:54.13:0,54,1141	1/1:7,0:6:6.01:62,6,0	1/1:19,0:19:2.87:39,3,0	1/1:18,0:18:18.06:412,18,0	0/1:31,0:27:23.99:680,0,24	1/1:17,0:17:21.07:667,21,0	1/1:23,0:23:10.05:644,10,0	1/1:6,0:6:3.01:91,3,0	1/1:25,0:25:29.86:929,30,0	1/1:17,0:17:12.04:396,12,0	1/1:15,0:15:21.07:649,21,0	1/1:15,0:15:26.93:787,27,0	1/1:10,0:10:18.06:533,18,0	0/1:17,0:17:23.80:145,0,24	1/1:19,0:19:47.78:519,48,0	0/1:11,0:11:7.95:199,0,8	0/1:13,0:13:12.12:22,0,12	1/1:17,0:18:8.35:95,8,0	1/1:5,0:5:6.02:187,6,0	1/1:9,0:9:2.95:19,3,0	1/1:14,0:14:8.11:224,8,0	1/1:25,0:25:12.03:275,12,0	1/1:19,0:19:17.22:442,17,0	1/1:18,0:18:9.02:288,9,0	1/1:1,4:5:3.01:90,3,0
chr10	24835516	.	T	TGTGTGTGTGTGCGCGCGC	22099.43	PASS	AB=0.957;AC=42;AF=0.750;AN=56;BaseQRankSum=-7.143;DP=557;FS=8.398;HRun=0;HaplotypeScore=207.2897;InbreedingCoeff=0.3824;MQ=53.23;MQ0=1;MQRankSum=-6.752;QD=49.11;ReadPosRankSum=2.636;VQSLOD=3.2003;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:29:32.91:1335,0,33	1/1:1,4:7:6.02:528,6,0	0/0:34,0:26:73.11:0,73,1868	0/0:30,0:27:68.95:0,69,1723	0/0:2,1:9:0:0,0,0	1/1:11,1:21:3.48:51,3,0	1/1:3,11:32:9.03:792,9,0	1/1:17,0:32:84.20:2494,84,0	1/1:4,10:19:21.07:1849,21,0	1/1:12,0:25:58.01:2458,58,0	1/1:0,3:7:3.01:260,3,0	1/1:6,9:32:29.30:2456,29,0	1/1:4,6:21:15.05:963,15,0	1/1:4,5:22:21.07:1819,21,0	1/1:7,0:19:24.08:1146,24,0	1/1:3,4:8:18.06:1343,18,0	0/0:18,0:18:21.51:0,22,246	0/1:19,0:19:99:360,0,164	0/1:13,0:13:99:263,0,170	0/0:14,0:14:9.03:0,9,148	0/1:18,0:18:68.97:69,0,77	1/1:1,1:5:6.02:524,6,0	1/1:5,0:10:2.48:23,2,0	1/1:4,5:17:5.15:425,5,0	1/1:2,10:36:6.02:518,6,0	1/1:7,0:24:30.77:1449,31,0	1/1:1,5:25:11.29:800,11,0	1/1:4,0:5:3.01:177,3,0
chr10	24835517	.	GCGC	G	631.20	PASS	AB=0.907;AC=11;AF=0.196;AN=56;BaseQRankSum=0.275;DP=448;FS=0.761;HRun=0;HaplotypeScore=166.3213;InbreedingCoeff=-0.1371;MQ=55.91;MQ0=1;MQRankSum=-3.159;QD=3.73;ReadPosRankSum=-1.829;VQSLOD=2.1973;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:20,6:27:40.43:40,0,135	0/0:6,0:6:6.02:0,6,77	0/0:33,0:26:74.28:0,74,1638	0/0:30,0:27:71.60:0,72,1474	0/0:10,0:8:3.88:0,4,20	0/0:10,7:18:5.98:0,6,80	0/1:25,0:25:32.34:32,0,60	0/1:25,6:28:99:317,0,1043	0/1:12,0:12:5.26:5,0,182	0/1:19,3:24:99:266,0,467	1/1:4,0:4:3.01:37,3,0	0/0:20,0:20:32.16:0,32,384	0/1:11,0:11:14.26:14,0,149	0/1:15,0:15:18.06:18,0,246	0/0:16,0:16:25.11:0,25,310	0/0:7,1:8:12.88:0,13,214	0/0:18,0:18:23.90:0,24,419	0/0:19,0:19:51.13:0,51,858	0/0:13,0:13:36.08:0,36,646	0/0:15,0:15:12.04:0,12,238	0/0:18,0:18:14.95:0,15,289	0/0:2,0:2:6.02:0,6,77	0/1:6,0:8:12.66:13,0,37	0/0:11,0:11:6.53:0,7,108	0/0:22,0:22:5.02:0,5,103	0/1:10,1:11:28.17:28,0,322	0/0:15,0:15:12.04:0,12,171	0/0:5,0:5:3.01:0,3,64
chr10	24835641	.	T	TG	22206.62	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=4.669;DP=686;FS=13.805;HRun=2;HaplotypeScore=128.2777;InbreedingCoeff=0.9961;MQ=58.88;MQ0=1;MQRankSum=-6.336;QD=35.76;ReadPosRankSum=5.722;VQSLOD=2.9004;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,30:35:73.13:1037,73,0	1/1:1,7:8:20.98:275,21,0	0/0:30,0:27:75.21:0,75,897	0/0:35,0:28:75.19:0,75,886	1/1:0,24:24:60.16:837,60,0	1/1:0,16:16:42.14:604,42,0	1/1:1,15:16:30.78:579,31,0	1/1:2,32:34:93.30:1313,93,0	1/1:1,37:37:99:1417,99,0	1/1:0,27:27:72.23:1017,72,0	1/1:0,15:15:39.04:529,39,0	1/1:0,33:33:93.31:1332,93,0	1/1:4,28:32:78.26:1116,78,0	1/1:0,30:30:81.27:1159,81,0	1/1:2,28:30:78.26:1110,78,0	1/1:0,22:22:54.18:776,54,0	1/1:1,10:11:27.09:388,27,0	1/1:5,15:20:31.49:616,31,0	1/1:1,19:20:60.16:814,60,0	1/1:1,26:27:72.17:1010,72,0	1/1:3,38:40:87.29:1252,87,0	1/1:1,14:15:33.11:474,33,0	1/1:2,13:15:27.06:388,27,0	1/1:1,21:22:51.04:734,51,0	1/1:1,23:24:63.21:899,63,0	1/1:1,26:27:69.23:987,69,0	1/1:1,27:28:75.25:1069,75,0	1/1:0,11:11:33.11:475,33,0
chr10	24835932	.	C	CT	19786.57	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=3.835;DP=533;FS=12.974;HRun=1;HaplotypeScore=197.1933;InbreedingCoeff=0.9858;MQ=73.92;MQ0=0;MQRankSum=-8.400;QD=39.89;ReadPosRankSum=6.038;VQSLOD=1.7971;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,11:11:33.11:493,33,0	1/1:0,11:11:33.11:493,33,0	0/0:17,0:17:30.04:0,30,471	0/0:20,0:20:54.09:0,54,651	1/1:4,24:28:57.01:978,57,0	1/1:1,22:23:69.20:1008,69,0	1/1:4,10:14:42.06:571,42,0	1/1:5,27:32:87.25:1258,87,0	1/1:3,20:23:63.21:935,63,0	1/1:3,23:26:69.23:1026,69,0	1/1:3,19:22:55.98:798,56,0	1/1:3,23:26:69.23:1031,69,0	1/1:2,19:21:63.18:907,63,0	1/1:1,15:16:48.15:698,48,0	1/1:2,27:29:84.24:1203,84,0	1/1:4,18:22:60.13:842,60,0	1/1:2,15:17:42.68:644,43,0	1/1:2,6:8:24.08:351,24,0	1/1:3,13:16:42.14:627,42,0	1/1:2,17:19:54.14:769,54,0	1/1:1,5:5:14.96:174,15,0	1/1:3,23:26:66.21:957,66,0	1/1:1,17:18:54.18:798,54,0	1/1:3,11:14:32.32:479,32,0	1/1:2,22:24:63.21:943,63,0	1/1:4,10:14:39.05:534,39,0	1/1:2,22:24:72.21:1053,72,0	1/1:3,3:6:17.98:217,18,0
chr10	24835952	.	G	GCAAT	30589.57	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=7.131;DP=538;FS=3.982;HRun=0;HaplotypeScore=215.7191;InbreedingCoeff=0.9604;MQ=73.59;MQ0=0;MQRankSum=-10.221;QD=61.55;ReadPosRankSum=3.745;VQSLOD=5.4086;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,7:14:33.11:709,33,0	1/1:1,9:10:30.10:773,30,0	0/0:19,0:19:51.17:0,51,904	0/0:22,0:22:63.14:0,63,1060	1/1:5,23:28:75.23:1446,75,0	1/1:9,18:27:72.24:1717,72,0	1/1:4,10:14:36.12:901,36,0	1/1:11,15:26:75.26:1946,75,0	1/1:4,18:22:60.20:1484,60,0	1/1:5,22:27:72.25:1869,72,0	1/1:3,18:21:51.17:1262,51,0	1/1:3,18:21:60.19:1514,60,0	1/1:5,13:18:48.16:1192,48,0	1/1:0,14:14:42.14:1118,42,0	1/1:8,17:25:63.21:1457,63,0	1/1:9,15:24:63.21:1450,63,0	1/1:2,11:13:36.12:885,36,0	1/1:4,2:6:15.05:361,15,0	1/1:10,16:26:69.23:1692,69,0	1/1:4,14:18:51.15:1162,51,0	1/1:4,6:9:12.04:232,12,0	1/1:11,18:29:66.22:1393,66,0	1/1:4,14:18:45.15:1055,45,0	1/1:5,11:16:27.09:643,27,0	1/1:4,17:21:54.18:1264,54,0	1/1:8,13:21:54.18:1366,54,0	1/1:5,18:23:60.19:1482,60,0	1/1:3,1:4:12.02:217,12,0
chr10	24835973	.	G	GT	18414.31	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=8.393;DP=545;FS=7.721;HRun=1;HaplotypeScore=207.7816;InbreedingCoeff=0.9774;MQ=75.02;MQ0=0;MQRankSum=-10.784;QD=37.35;ReadPosRankSum=3.490;VQSLOD=3.5740;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,16:17:45.11:646,45,0	1/1:4,8:12:36.11:518,36,0	0/0:29,0:29:84.24:0,84,1040	0/0:23,0:23:57.17:0,57,708	1/1:4,25:29:62.67:822,63,0	1/1:0,19:19:54.11:757,54,0	1/1:6,9:15:30.06:414,30,0	1/1:3,16:19:57.18:815,57,0	1/1:3,13:16:45.15:672,45,0	1/1:1,28:29:81.27:1205,81,0	1/1:3,20:23:57.15:822,57,0	1/1:1,17:18:54.18:804,54,0	1/1:3,16:19:51.13:734,51,0	1/1:4,13:17:48.03:639,48,0	1/1:4,18:22:51.14:736,51,0	1/1:3,17:20:48.16:715,48,0	1/1:3,5:8:17.97:218,18,0	1/1:1,3:4:12:154,12,0	1/1:9,17:26:72.24:1063,72,0	1/1:0,29:29:84.19:1169,84,0	1/1:0,12:12:30.06:424,30,0	1/1:2,19:22:54.14:777,54,0	1/1:3,12:15:36.04:484,36,0	1/1:2,18:20:42.10:600,42,0	1/1:4,18:22:54.05:714,54,0	1/1:1,24:25:69.23:1032,69,0	1/1:0,27:27:78.26:1167,78,0	1/1:1,7:8:21.07:314,21,0
chr10	24836096	.	CAG	C	3076.88	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=3.235;DP=660;FS=1.433;HRun=0;HaplotypeScore=149.1818;InbreedingCoeff=0.9983;MQ=64.62;MQ0=0;MQRankSum=-2.618;QD=33.44;ReadPosRankSum=0.224;VQSLOD=5.5022;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:66.23:0,66,1203	0/0:10,0:10:30.10:0,30,548	0/0:28,0:28:34.13:0,34,997	0/0:26,1:25:22.19:0,22,902	0/0:33,0:33:87.26:0,87,1527	0/0:23,0:23:69.24:0,69,1257	0/0:25,0:25:63.20:0,63,1119	0/0:30,0:30:81.27:0,81,1449	0/0:17,0:17:48.16:0,48,875	0/0:27,0:27:78.27:0,78,1421	0/0:27,0:27:69.24:0,69,1257	0/0:27,0:27:66.21:0,66,1165	0/0:35,0:35:98.85:0,99,1798	0/0:31,0:31:84.27:0,84,1506	0/0:23,0:23:57.20:0,57,1041	0/0:25,0:25:60.14:0,60,1029	1/1:1,14:15:42.14:599,42,0	1/1:0,10:10:27.09:385,27,0	1/1:0,22:22:60.04:768,60,0	1/1:0,18:18:39.13:558,39,0	1/1:1,26:26:66.22:943,66,0	0/0:26,0:26:66.23:0,66,1199	0/0:29,0:29:84.27:0,84,1505	0/0:13,0:13:24.03:0,24,408	0/0:22,0:22:54.19:0,54,978	0/0:21,0:21:57.15:0,57,1009	0/0:27,0:27:54.66:0,55,981	0/0:17,0:17:36.11:0,36,628
chr10	24836141	.	CAT	C	6148.51	PASS	AB=1.000;AC=46;AF=0.821;AN=56;BaseQRankSum=0.304;DP=521;FS=2.347;HRun=0;HaplotypeScore=174.1110;InbreedingCoeff=0.4223;MQ=51.05;MQ0=4;MQRankSum=2.015;QD=13.03;ReadPosRankSum=0.291;VQSLOD=4.8210;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:15:3.28:72,3,0	1/1:13,2:15:41.24:289,41,0	0/0:24,0:11:26.95:0,27,417	0/0:21,0:9:23.97:0,24,324	1/1:25,1:26:17.92:260,18,0	1/1:20,2:22:32.59:265,33,0	1/1:18,3:21:28.20:381,28,0	0/1:21,0:21:69.77:179,0,70	1/1:8,0:8:9.03:79,9,0	1/1:16,0:16:40.35:267,40,0	1/1:22,3:25:47.74:368,48,0	1/1:15,1:16:35.30:244,35,0	1/1:25,2:27:36.43:384,36,0	1/1:28,1:29:77.42:606,77,0	0/1:23,0:23:52.96:91,0,53	1/1:21,0:21:26.70:340,27,0	1/1:8,0:9:8.73:97,9,0	0/0:3,0:4:9.96:0,10,51	0/1:20,0:18:76.42:109,0,76	0/1:14,0:18:19.54:105,0,20	1/1:16,0:15:1.95:53,2,0	1/1:23,2:25:44.71:377,45,0	1/1:18,0:17:38.16:243,38,0	1/1:13,1:14:32.34:234,32,0	1/1:16,7:23:45.41:427,45,0	1/1:13,1:14:31.17:242,31,0	1/1:18,0:18:25.04:197,25,0	1/1:10,2:12:20.94:238,21,0
chr10	24836143	.	T	TGA	5528.53	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-0.118;DP=552;FS=0.766;HRun=0;HaplotypeScore=204.1890;InbreedingCoeff=0.8931;MQ=50.00;MQ0=5;MQRankSum=3.853;QD=11.06;ReadPosRankSum=2.890;VQSLOD=4.7134;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:18,1:19:19.97:208,20,0	1/1:15,0:15:23.51:107,24,0	0/0:28,0:14:29.80:0,30,391	0/0:24,0:11:26.83:0,27,291	1/1:26,0:26:33.20:242,33,0	1/1:20,0:20:18.58:82,19,0	1/1:22,0:22:30.50:175,30,0	1/1:19,2:21:51.29:595,51,0	1/1:7,0:7:8.50:57,8,0	1/1:18,0:18:31.38:201,31,0	1/1:25,0:25:15.98:134,16,0	1/1:17,0:17:27.20:150,27,0	1/1:24,0:24:39.86:312,40,0	1/1:29,0:29:42.73:325,43,0	1/1:22,2:24:40.23:394,40,0	1/1:22,0:22:23.97:213,24,0	1/1:12,0:12:22.58:180,23,0	1/1:6,0:6:10.74:93,11,0	1/1:26,0:24:60.50:478,60,0	1/1:25,0:25:39.92:379,40,0	1/1:18,1:18:8.66:72,9,0	1/1:24,0:24:21.80:90,22,0	1/1:16,0:15:28.08:170,28,0	1/1:14,0:14:14.77:92,15,0	1/1:23,0:23:39.80:184,40,0	1/1:15,0:15:36.41:293,36,0	1/1:19,0:19:25.59:171,26,0	1/1:12,0:12:27.90:134,28,0
chr10	24836173	.	TAA	T	10387.61	PASS	AB=0.895;AC=51;AF=0.911;AN=56;BaseQRankSum=3.417;DP=513;FS=2.344;HRun=4;HaplotypeScore=135.5806;InbreedingCoeff=0.7296;MQ=53.78;MQ0=2;MQRankSum=-2.908;QD=23.08;ReadPosRankSum=4.922;VQSLOD=2.6567;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:12,1:13:11.29:135,11,0	1/1:0,13:13:33.11:460,33,0	0/0:37,0:22:56.83:0,57,978	0/0:26,0:14:35.20:0,35,466	1/1:2,22:24:21.07:299,21,0	1/1:0,15:15:30.10:422,30,0	1/1:0,26:26:38.80:514,39,0	1/1:4,21:25:64.81:845,65,0	1/1:0,7:7:6.02:88,6,0	1/1:0,24:24:60.01:756,60,0	1/1:1,18:19:33.10:451,33,0	1/1:0,15:15:22.88:305,23,0	1/1:2,17:19:33.06:454,33,0	1/1:0,21:21:45.15:650,45,0	0/1:15,2:17:4.63:143,0,5	1/1:1,19:20:27.09:395,27,0	1/1:12,0:12:9.22:187,9,0	1/1:7,0:7:13.67:172,14,0	1/1:10,1:10:18.89:236,19,0	1/1:25,1:26:43.26:428,43,0	1/1:13,0:12:11.72:150,12,0	1/1:11,16:27:56.67:780,57,0	1/1:0,13:13:27.09:393,27,0	1/1:2,14:16:16.41:376,16,0	1/1:2,19:21:51.12:669,51,0	1/1:1,13:14:33.11:447,33,0	1/1:0,17:17:18.06:252,18,0	1/1:1,14:15:27.09:380,27,0
chr10	24836345	.	T	TAA	13190.71	PASS	AC=50;AF=0.926;AN=54;BaseQRankSum=4.383;DP=363;FS=1.159;HRun=0;HaplotypeScore=181.5328;InbreedingCoeff=0.8262;MQ=66.16;MQ0=0;MQRankSum=-6.087;QD=38.35;ReadPosRankSum=4.734;VQSLOD=5.2666;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,2:4:6.02:82,6,0	1/1:1,11:12:30.10:420,30,0	0/0:8,0:8:18.66:0,19,230	0/0:11,0:11:13.59:0,14,152	1/1:2,16:18:54.09:750,54,0	1/1:2,15:17:51.17:744,51,0	1/1:1,5:6:15.05:210,15,0	1/1:2,8:10:27.09:406,27,0	1/1:1,15:16:45.15:613,45,0	1/1:2,22:24:69.21:969,69,0	1/1:1,13:14:36.12:500,36,0	1/1:2,11:13:33.11:464,33,0	1/1:2,16:18:31.31:650,31,0	1/1:3,10:13:33.11:457,33,0	1/1:1,20:21:63.19:856,63,0	1/1:1,16:17:51.16:701,51,0	1/1:0,5:5:15.05:215,15,0	1/1:2,2:4:6.43:86,6,0	1/1:0,8:8:24.08:352,24,0	1/1:0,25:26:78.19:1072,78,0	./.	1/1:0,17:19:54.14:726,54,0	1/1:0,17:19:51.17:700,51,0	1/1:2,2:4:8.93:74,9,0	1/1:2,17:19:57.10:758,57,0	1/1:0,14:14:42.14:604,42,0	1/1:3,17:20:48.13:651,48,0	1/1:0,3:3:9.03:130,9,0
chr10	24836346	.	C	CAACTCA	34784.27	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=0.749;DP=440;FS=0.000;HRun=0;HaplotypeScore=170.1916;InbreedingCoeff=0.7951;MQ=57.54;MQ0=0;MQRankSum=-5.127;QD=82.04;ReadPosRankSum=3.386;VQSLOD=5.9759;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,2:6:9.03:274,9,0	1/1:1,11:12:33.11:1011,33,0	0/0:7,0:7:7.49:0,7,337	0/0:7,0:9:11.63:0,12,203	1/1:6,16:23:63.69:1929,64,0	1/1:6,15:21:60.68:1801,61,0	1/1:4,5:9:24.08:743,24,0	1/1:7,8:15:44.88:1206,45,0	1/1:4,15:19:54.17:1576,54,0	1/1:3,22:25:75.26:2281,75,0	1/1:5,13:18:48.16:1476,48,0	1/1:5,11:16:45.14:1270,45,0	1/1:8,15:24:63.22:1875,63,0	1/1:6,10:17:48.15:1390,48,0	1/1:5,19:24:66.23:2007,66,0	1/1:3,16:19:57.20:1744,57,0	1/1:3,5:8:21.54:625,22,0	1/1:3,2:5:15.05:446,15,0	1/1:1,8:9:27.09:854,27,0	1/1:5,25:30:81.28:2488,81,0	1/1:1,0:1:3.01:93,3,0	1/1:8,17:25:66.23:2006,66,0	1/1:7,17:24:60.16:1742,60,0	1/1:4,2:8:18.06:585,18,0	1/1:3,17:20:54.19:1657,54,0	1/1:7,14:21:60.20:1758,60,0	1/1:5,16:22:57.15:1668,57,0	1/1:0,3:3:9.03:279,9,0
chr10	24836611	.	T	TTG	26584.04	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-0.982;DP=706;FS=5.651;HRun=0;HaplotypeScore=174.0943;InbreedingCoeff=0.9262;MQ=73.35;MQ0=0;MQRankSum=-7.303;QD=42.00;ReadPosRankSum=6.991;VQSLOD=5.0135;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,22:24:38.87:801,39,0	1/1:0,20:20:54.18:913,54,0	0/0:45,0:36:88.59:0,89,1020	0/0:28,0:19:32.41:0,32,396	1/1:0,29:29:84.21:1342,84,0	1/1:2,33:35:84.28:1478,84,0	1/1:1,19:20:48.16:824,48,0	1/1:2,27:30:84.13:1265,84,0	1/1:0,24:24:63.22:1092,63,0	1/1:0,34:34:96.33:1690,96,0	1/1:1,24:26:71.89:1046,72,0	1/1:1,24:25:57.19:974,57,0	1/1:0,30:30:75.26:1291,75,0	1/1:0,29:29:69.24:1200,69,0	1/1:0,19:19:45.15:789,45,0	1/1:4,29:33:78.25:1371,78,0	1/1:0,13:13:30.10:527,30,0	1/1:2,9:11:3.92:398,4,0	1/1:1,22:22:63.14:957,63,0	1/1:0,34:35:84.08:1372,84,0	1/1:0,12:12:27.09:461,27,0	1/1:2,27:29:74.99:1191,75,0	1/1:1,15:16:42.14:735,42,0	1/1:0,20:20:54.19:951,54,0	1/1:0,21:22:45.15:761,45,0	1/1:1,22:24:69.07:1071,69,0	1/1:3,29:34:81.26:1404,81,0	1/1:0,14:14:39.13:679,39,0
chr10	24837100	.	AC	A	5440.82	PASS	AB=0.500;AC=48;AF=0.857;AN=56;BaseQRankSum=10.230;DP=387;FS=3.325;HRun=1;HaplotypeScore=262.4562;InbreedingCoeff=0.6796;MQ=88.36;MQ0=0;MQRankSum=-10.084;QD=16.10;ReadPosRankSum=9.797;VQSLOD=4.1754;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,11:11:21.64:140,22,0	0/1:0,3:3:1.95:29,0,2	0/0:27,0:27:80.63:0,81,1196	0/0:20,0:20:57.19:0,57,891	1/1:0,14:14:19.90:178,20,0	1/1:1,20:21:57.44:362,57,0	1/1:2,12:14:31.82:187,32,0	1/1:0,26:26:72.61:462,73,0	1/1:0,13:13:27.54:214,28,0	1/1:2,18:20:56.48:396,56,0	1/1:0,9:9:20.50:122,21,0	1/1:0,13:13:24.71:201,25,0	1/1:0,14:14:33.31:237,33,0	1/1:0,19:19:49.85:315,50,0	1/1:0,13:13:38.45:249,38,0	1/1:0,20:20:46.24:324,46,0	1/1:0,6:6:10.67:61,11,0	0/0:1,1:2:2.99:0,3,23	1/1:0,9:9:26.81:191,27,0	1/1:1,11:12:18.17:160,18,0	1/1:1,6:7:15.63:96,16,0	1/1:0,14:14:32.08:201,32,0	1/1:0,13:13:31.27:197,31,0	1/1:0,8:8:18.54:112,19,0	1/1:1,14:16:30.88:228,31,0	1/1:0,18:18:53.48:366,53,0	1/1:0,20:20:59.18:388,59,0	0/1:0,5:5:12.29:25,0,12
chr10	24837102	.	AAGATATAG	A	20895.98	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=10.950;DP=383;FS=16.243;HRun=0;HaplotypeScore=258.1947;InbreedingCoeff=0.8658;MQ=88.65;MQ0=0;MQRankSum=-10.977;QD=62.19;ReadPosRankSum=7.779;VQSLOD=3.0216;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:0,11:11:30.02:570,30,0	1/1:0,3:3:9.03:167,9,0	0/0:27,0:27:81.28:0,81,3552	0/0:20,0:20:57.17:0,57,2265	1/1:0,14:14:42.13:832,42,0	1/1:0,20:20:60.21:1312,60,0	1/1:2,12:14:36.12:772,36,0	1/1:0,26:26:75.26:1682,75,0	1/1:0,13:13:39.13:841,39,0	1/1:1,18:19:54.19:1255,54,0	1/1:0,9:9:24.08:511,24,0	1/1:0,13:13:39.13:828,39,0	1/1:0,14:14:42.14:920,42,0	1/1:0,19:19:54.19:1193,54,0	1/1:0,13:13:39.13:883,39,0	1/1:0,20:20:60.20:1293,60,0	1/1:0,6:6:12.04:256,12,0	1/1:1,1:2:3.01:56,3,0	1/1:0,9:9:27.09:630,27,0	1/1:0,11:11:30.10:615,30,0	1/1:1,6:7:17.85:336,18,0	1/1:0,14:14:42.14:883,42,0	1/1:0,13:13:36.12:781,36,0	1/1:0,8:8:24.08:482,24,0	1/1:1,14:15:45.15:950,45,0	1/1:0,18:18:54.19:1244,54,0	1/1:0,20:20:60.21:1363,60,0	1/1:0,5:5:15.05:241,15,0
chr10	24837130	.	A	AT	16776.43	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=6.942;DP=523;FS=6.686;HRun=3;HaplotypeScore=249.0566;InbreedingCoeff=0.9357;MQ=65.52;MQ0=0;MQRankSum=-8.238;QD=33.89;ReadPosRankSum=4.193;VQSLOD=3.1025;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,22:25:57.15:772,57,0	1/1:0,5:5:12.04:168,12,0	0/0:16,0:16:42.10:0,42,475	0/0:12,0:12:30.03:0,30,322	1/1:3,19:22:57.08:739,57,0	1/1:3,17:20:45.08:603,45,0	1/1:4,22:26:57.15:765,57,0	1/1:4,37:41:99:1479,108,0	1/1:2,14:16:36.12:502,36,0	1/1:2,26:28:78.25:1069,78,0	1/1:1,17:18:45.15:626,45,0	1/1:2,14:16:33.11:459,33,0	1/1:2,20:23:57.19:789,57,0	1/1:2,22:24:63.21:876,63,0	1/1:2,23:25:63.21:877,63,0	1/1:3,21:24:63.21:878,63,0	1/1:4,7:11:18.06:251,18,0	1/1:0,4:4:9.03:126,9,0	1/1:3,22:25:66.18:887,66,0	1/1:2,13:15:33.11:460,33,0	1/1:0,12:12:27.09:376,27,0	1/1:2,16:18:48.09:645,48,0	1/1:2,15:17:45.15:627,45,0	1/1:0,10:10:24.04:313,24,0	1/1:0,19:19:51.17:710,51,0	1/1:3,21:24:63.19:859,63,0	1/1:3,20:23:54.18:751,54,0	1/1:0,4:4:12.04:168,12,0
chr10	24837357	.	A	AGAGGCAGAATCACCGAGCCCCAT	11706.13	PASS	AB=0.732;AC=50;AF=0.962;AN=52;BaseQRankSum=1.190;DP=185;FS=15.530;HRun=0;HaplotypeScore=257.1473;InbreedingCoeff=-0.0902;MQ=61.66;MQ0=0;MQRankSum=-2.390;QD=63.62;ReadPosRankSum=1.630;VQSLOD=2.9614;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:9,0:9:12.51:521,13,0	1/1:1,0:1:3.01:93,3,0	0/1:3,1:5:13.96:438,0,14	0/1:2,0:3:17.27:68,0,17	1/1:2,0:3:9.03:203,9,0	1/1:8,0:7:12.04:670,12,0	1/1:5,0:5:9.03:264,9,0	1/1:18,0:18:48.13:1100,48,0	1/1:11,0:11:24.08:768,24,0	1/1:3,0:3:6.02:210,6,0	1/1:3,0:3:6.38:128,6,0	1/1:8,0:9:16.45:470,16,0	1/1:15,0:15:27.08:834,27,0	1/1:12,0:12:18.06:725,18,0	1/1:12,0:13:36.12:1325,36,0	1/1:9,0:10:18.06:675,18,0	1/1:4,0:4:6.01:190,6,0	1/1:2,0:2:3.01:94,3,0	1/1:6,0:6:12.04:360,12,0	1/1:5,0:5:5.98:74,6,0	./.	1/1:5,0:5:9.03:269,9,0	1/1:6,0:6:6.02:173,6,0	1/1:6,0:6:12.04:487,12,0	1/1:6,0:7:14.26:333,14,0	1/1:5,0:5:15.05:532,15,0	1/1:9,0:10:18.06:703,18,0	./.
chr10	24839303	.	A	AACACACAC	16250.01	PASS	AB=1.000;AC=53;AF=0.946;AN=56;BaseQRankSum=-3.076;DP=595;FS=10.196;HRun=0;HaplotypeScore=192.7423;InbreedingCoeff=0.3087;MQ=57.23;MQ0=7;MQRankSum=-2.042;QD=28.97;ReadPosRankSum=1.600;VQSLOD=3.4404;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,0:21:12.04:201,12,0	1/1:4,2:6:12.02:303,12,0	0/0:33,0:22:1.52:0,2,255	0/1:24,0:15:7.48:7,0,50	1/1:24,10:34:32.44:833,32,0	1/1:11,9:22:15.05:535,15,0	1/1:26,5:32:33.10:966,33,0	1/1:20,0:20:32.95:478,33,0	1/1:18,3:21:4.07:363,4,0	1/1:21,4:25:36.12:1167,36,0	1/1:8,4:13:11.39:403,11,0	1/1:8,13:24:26.77:958,27,0	1/1:22,5:27:36.12:1340,36,0	1/1:15,1:17:21.05:444,21,0	1/1:21,0:32:23.31:731,23,0	1/1:17,4:21:21.07:757,21,0	1/1:16,0:17:18.02:435,18,0	1/1:7,0:6:5.94:41,6,0	1/1:17,0:17:23.99:432,24,0	1/1:19,0:22:32.79:854,33,0	1/1:13,0:13:5.80:44,6,0	1/1:14,13:31:26.93:1003,27,0	1/1:6,11:20:24.08:877,24,0	1/1:14,3:18:11.74:242,12,0	1/1:19,2:21:17.92:443,18,0	1/1:18,3:22:42.05:1055,42,0	1/1:21,4:26:39.13:1214,39,0	1/1:5,0:5:3.01:124,3,0
chr10	24839365	.	AAGAGAGAG	A	1314.78	PASS	AB=1.000;AC=11;AF=0.204;AN=54;BaseQRankSum=-0.816;DP=557;FS=33.234;HRun=0;HaplotypeScore=176.4713;InbreedingCoeff=0.7695;MQ=48.62;MQ0=19;MQRankSum=-1.646;QD=13.15;ReadPosRankSum=-2.521;VQSLOD=1.3284;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:23:31.55:0,32,641	0/0:5,0:5:15.05:0,15,260	./.	0/0:39,0:8:0:0,0,0	0/0:25,0:24:15.05:0,15,399	0/0:18,0:17:21.79:0,22,649	0/0:24,0:23:23.67:0,24,543	0/0:24,0:22:24.96:0,25,451	0/0:15,0:17:18.06:0,18,352	0/0:22,0:21:29.99:0,30,566	0/0:12,0:12:17.65:0,18,453	0/0:18,0:18:6.02:0,6,149	0/0:24,0:25:37.80:0,38,752	0/0:16,0:16:11.67:0,12,230	0/0:27,0:34:69.22:0,69,1899	0/0:17,0:18:15.05:0,15,380	1/1:11,7:19:12.04:282,12,0	1/1:6,0:5:9.03:196,9,0	1/1:16,4:20:9.13:266,9,0	1/1:16,15:32:38.95:620,39,0	1/1:4,0:5:6.02:103,6,0	0/0:19,0:18:3.78:0,4,26	0/0:16,0:15:5.68:0,6,190	0/1:17,0:16:0:0,0,0	0/0:15,0:14:13.55:0,14,388	0/0:17,0:17:39.13:0,39,1032	0/0:16,0:23:30.07:0,30,639	0/0:4,0:4:9.03:0,9,292
chr10	24839768	.	CA	C	3119.11	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=10.760;DP=687;FS=4.307;HRun=4;HaplotypeScore=88.7502;InbreedingCoeff=0.9988;MQ=78.10;MQ0=0;MQRankSum=-13.057;QD=29.71;ReadPosRankSum=-2.016;VQSLOD=2.8813;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:81.26:0,81,1120	0/0:9,0:9:27.09:0,27,378	0/0:17,0:17:45.14:0,45,603	0/0:17,0:17:41.37:0,41,519	0/0:39,0:39:99:0,111,1520	0/0:34,0:34:99:0,102,1397	0/0:19,0:19:57.17:0,57,780	0/0:28,0:28:84.27:0,84,1161	0/0:25,0:25:75.18:0,75,992	0/0:37,0:37:99:0,108,1513	0/0:23,0:23:69.22:0,69,951	0/0:22,0:22:63.20:0,63,864	0/0:28,0:28:84.26:0,84,1143	0/0:28,0:28:81.26:0,81,1118	1/1:1,18:19:54.17:647,54,0	0/0:29,0:29:78.25:0,78,1077	1/1:0,11:11:30.09:356,30,0	1/1:1,12:13:36.11:431,36,0	1/1:1,27:28:78.23:924,78,0	1/1:3,21:24:60.17:703,60,0	1/1:1,9:10:21.06:246,21,0	0/0:27,0:27:81.27:0,81,1133	0/0:23,0:23:60.20:0,60,839	0/0:19,0:19:57.19:0,57,797	0/0:33,0:32:99:0,99,1386	0/0:32,0:32:96.30:0,96,1314	0/0:51,0:51:99:0,147,2008	0/0:14,0:14:36.12:0,36,503
chr10	24839777	.	A	ATTTT	3719.04	PASS	AB=0.541;AC=11;AF=0.196;AN=56;BaseQRankSum=8.871;DP=682;FS=2.376;HRun=9;HaplotypeScore=136.4557;InbreedingCoeff=0.9227;MQ=75.82;MQ0=0;MQRankSum=-10.772;QD=34.76;ReadPosRankSum=-2.027;VQSLOD=1.3561;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:93.27:0,93,1319	0/0:9,0:9:24.06:0,24,351	0/0:17,0:17:42.11:0,42,547	0/0:13,0:13:23.60:0,24,287	0/0:36,0:36:96.18:0,96,1361	0/0:35,0:35:99:0,105,1533	0/0:21,0:21:55.04:0,55,770	0/0:35,0:35:87.16:0,87,1221	0/0:26,0:26:75.21:0,75,1077	0/0:36,0:37:99:0,99,1391	0/0:22,0:23:64.45:0,64,907	0/0:20,0:20:57.18:0,57,834	0/0:26,0:27:58.06:0,58,1036	0/0:27,0:27:72.15:0,72,1009	0/1:3,0:20:0.74:1,0,23	0/0:25,0:25:72.23:0,72,1053	1/1:5,6:11:15.05:359,15,0	1/1:8,5:13:24.06:511,24,0	1/1:16,13:29:31.48:1100,31,0	1/1:10,16:28:66.22:1462,66,0	1/1:2,4:6:12.04:287,12,0	0/0:27,0:28:84.24:0,84,1187	0/0:20,0:20:51.15:0,51,746	0/0:19,0:19:54.18:0,54,790	0/0:32,0:31:75.19:0,75,1096	0/0:33,0:33:87.23:0,87,1236	0/0:53,0:53:99:0,153,2218	0/0:7,0:7:17.98:0,18,217
chr10	24840846	.	GTTCT	G	1214.55	PASS	AB=0.950;AC=10;AF=0.179;AN=56;BaseQRankSum=3.716;DP=392;FS=5.658;HRun=0;HaplotypeScore=77.1563;InbreedingCoeff=0.8093;MQ=78.32;MQ0=6;MQRankSum=-3.328;QD=14.99;ReadPosRankSum=2.502;VQSLOD=2.4169;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:29.91:0,30,248	0/0:6,0:5:15.01:0,15,184	0/0:20,0:15:31.33:0,31,377	0/0:33,0:21:50.04:0,50,497	0/0:11,0:11:33.03:0,33,356	0/0:15,0:15:38.99:0,39,364	0/0:11,0:11:29.88:0,30,245	0/0:16,0:16:38.50:0,38,409	0/0:7,0:7:13.81:0,14,109	0/0:13,0:13:39.07:0,39,505	0/0:20,0:19:53.98:0,54,484	0/0:17,0:17:45.03:0,45,522	0/0:14,0:13:32.93:0,33,384	0/0:16,0:16:41.87:0,42,424	0/1:15,0:15:0.56:213,0,1	0/0:18,0:18:47.92:0,48,496	1/1:9,0:8:14.92:150,15,0	0/1:8,1:8:9.30:79,0,9	1/1:11,1:12:30.78:277,31,0	1/1:0,20:22:32.87:537,33,0	1/1:14,0:13:14.58:124,15,0	0/0:16,0:16:38.99:0,39,357	0/0:15,0:15:38.87:0,39,317	0/0:5,0:5:11.90:0,12,110	0/0:16,0:16:44.93:0,45,381	0/0:13,0:12:36.01:0,36,379	0/0:11,0:11:29.96:0,30,348	0/0:6,0:6:17.95:0,18,145
chr10	24840886	.	T	TTA	1445.32	PASS	AB=0.571;AC=11;AF=0.196;AN=56;BaseQRankSum=8.044;DP=404;FS=1.387;HRun=0;HaplotypeScore=80.7034;InbreedingCoeff=0.7833;MQ=61.23;MQ0=8;MQRankSum=-4.815;QD=20.95;ReadPosRankSum=-2.193;VQSLOD=3.4669;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:7:9.94:0,10,105	0/0:12,0:10:27.07:0,27,377	0/0:26,0:10:22.21:0,22,241	0/0:57,0:19:17.40:0,17,488	0/0:23,0:23:34.81:0,35,456	0/0:18,0:18:26.80:0,27,360	0/0:11,0:11:15.05:0,15,227	0/0:12,0:12:30.90:0,31,452	0/0:10,0:10:8.87:0,9,126	0/0:19,0:19:57.09:0,57,763	0/0:10,0:9:17.98:0,18,228	0/0:11,0:11:14.71:0,15,208	0/0:12,0:11:18.91:0,19,226	0/0:15,0:15:24.07:0,24,332	0/1:3,9:12:25.95:150,0,26	0/0:8,0:8:11.35:0,11,115	1/1:2,5:7:8.92:71,9,0	1/1:3,2:4:9.03:141,9,0	1/1:4,6:10:30.08:406,30,0	1/1:22,0:22:63.02:747,63,0	1/1:1,12:13:9.02:98,9,0	0/0:11,0:11:15.04:0,15,209	0/0:13,0:12:15.05:0,15,231	0/0:9,0:9:9.01:0,9,110	0/0:12,0:11:18.06:0,18,281	0/0:13,0:12:36.11:0,36,502	0/0:21,0:21:56.83:0,57,697	0/0:5,0:5:15.05:0,15,217
chr10	24841676	.	AAT	A	3114.63	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=13.289;DP=621;FS=4.886;HRun=0;HaplotypeScore=91.8235;InbreedingCoeff=0.9951;MQ=79.50;MQ0=0;MQRankSum=-4.669;QD=33.49;ReadPosRankSum=0.521;VQSLOD=5.9924;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:96.33:0,96,1737	0/0:15,0:15:45.15:0,45,825	0/0:14,0:14:39.13:0,39,657	0/0:16,0:16:45.07:0,45,752	0/0:24,0:24:69.22:0,69,1216	0/0:29,0:29:84.27:0,84,1476	0/0:25,0:25:75.24:0,75,1338	0/0:30,0:30:87.30:0,87,1586	0/0:24,0:24:66.23:0,66,1194	0/0:24,0:24:69.24:0,69,1261	0/0:18,0:18:51.16:0,51,896	0/0:25,0:25:75.26:0,75,1362	0/0:26,0:26:75.26:0,75,1365	0/0:25,0:25:69.24:0,69,1258	0/0:29,0:29:87.30:0,87,1583	0/0:29,0:29:81.25:0,81,1425	1/1:1,9:10:21.07:301,21,0	1/1:2,9:11:27.09:387,27,0	1/1:0,18:18:54.17:756,54,0	1/1:1,28:29:72.24:1030,72,0	1/1:1,24:25:57.19:816,57,0	0/0:24,0:24:66.21:0,66,1180	0/0:19,0:19:57.18:0,57,1008	0/0:34,0:34:96.33:0,96,1740	0/0:25,0:25:69.24:0,69,1265	0/0:13,0:13:39.13:0,39,687	0/0:21,0:21:60.21:0,60,1092	0/0:5,0:5:15.05:0,15,275
chr10	24842055	.	T	TA	673.69	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-5.264;DP=573;FS=4.523;HRun=9;HaplotypeScore=58.6585;InbreedingCoeff=0.9445;MQ=76.14;MQ0=0;MQRankSum=-0.842;QD=22.46;ReadPosRankSum=1.099;VQSLOD=4.5919;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:22:59.03:0,59,501	0/0:15,0:15:35.99:0,36,313	0/0:20,0:20:15.84:0,16,241	0/0:15,0:13:20.62:0,21,165	0/0:23,0:23:62.99:0,63,547	0/0:23,0:23:65.98:0,66,571	0/0:20,0:20:53.97:0,54,464	0/0:28,0:28:71.97:0,72,622	0/0:14,0:14:38.99:0,39,339	0/0:20,0:20:56.97:0,57,493	0/0:21,1:22:17.79:0,18,383	0/0:18,1:19:14.79:0,15,354	0/0:28,0:28:80.97:0,81,699	0/0:22,0:22:59.33:0,59,499	1/1:4,26:30:49.15:769,49,0	0/0:17,0:18:40.99:0,41,345	0/0:19,0:19:53.01:0,53,445	0/0:12,0:12:29.99:0,30,260	0/0:29,0:29:80.52:0,81,693	0/0:26,0:26:68.98:0,69,599	0/0:9,0:9:20.97:0,21,177	0/0:13,0:13:32.97:0,33,282	0/0:21,0:21:56.96:0,57,491	0/0:25,0:25:68.98:0,69,598	0/0:20,1:21:20.80:0,21,410	0/0:19,1:20:20.81:0,21,410	0/0:29,0:30:83:0,83,705	0/0:8,0:8:24:0,24,208
chr10	24842310	.	CGTGTGTGTGTGTGTGTGTGTGTGT	C	4134.11	PASS	AB=0.587;AC=10;AF=0.179;AN=56;BaseQRankSum=6.691;DP=695;FS=12.731;HRun=0;HaplotypeScore=363.4841;InbreedingCoeff=0.6942;MQ=61.68;MQ0=21;MQRankSum=-4.481;QD=27.38;ReadPosRankSum=-0.685;VQSLOD=0.7027;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:36:34.88:0,35,2073	0/0:12,0:12:21.07:0,21,1198	0/0:26,0:15:9.68:0,10,250	0/0:37,0:23:29.77:0,30,1139	0/0:23,0:23:51.18:0,51,4165	0/0:19,0:20:45.15:0,45,3441	0/0:27,0:28:56.27:0,56,4077	0/0:23,0:21:48.16:0,48,3031	0/0:14,0:18:39.13:0,39,3523	0/0:17,0:18:45.15:0,45,4070	0/0:17,0:19:39.11:0,39,2579	0/0:26,0:27:58.30:0,58,3789	0/0:28,0:28:54.17:0,54,4108	0/0:21,0:24:39.13:0,39,3149	0/1:12,0:40:41.95:859,0,42	0/0:36,0:39:75.69:0,76,5878	1/1:10,17:27:3:190,3,0	0/1:3,7:10:51.94:367,0,52	1/1:11,12:19:35.96:855,36,0	1/1:5,15:20:23.82:918,24,0	1/1:30,0:29:38.89:944,39,0	0/0:19,0:20:42.14:0,42,3033	0/0:15,0:15:36.12:0,36,2385	0/0:36,0:40:96.32:0,96,8156	0/0:25,0:26:54.18:0,54,5079	0/0:12,0:23:60.18:0,60,3785	0/0:13,0:23:51.65:0,52,3269	0/0:5,0:7:15.64:0,16,814
chr10	24842324	.	TG	T	472.51	PASS	AB=1.000;AC=8;AF=0.143;AN=56;BaseQRankSum=8.493;DP=702;FS=0.693;HRun=1;HaplotypeScore=117.9688;InbreedingCoeff=0.3381;MQ=50.64;MQ0=25;MQRankSum=-5.636;QD=3.94;ReadPosRankSum=1.388;VQSLOD=0.3509;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:35:50.31:0,50,674	0/0:11,0:11:27.09:0,27,370	0/0:26,0:10:20.28:0,20,297	0/0:41,0:17:44.81:0,45,542	0/0:24,0:24:56.80:0,57,841	0/0:22,0:22:55.05:0,55,761	0/0:29,0:29:69.65:0,70,871	0/0:23,0:21:62.42:0,62,875	0/0:25,0:23:55.33:0,55,662	0/0:19,0:18:54:0,54,740	0/0:24,0:24:59.18:0,59,746	0/0:32,0:31:76.30:0,76,1013	0/0:27,0:27:72.24:0,72,1026	0/0:26,0:24:45:0,45,579	0/1:34,0:33:21.33:21,0,49	0/0:39,0:38:82.86:0,83,1097	1/1:19,0:19:3:25,3,0	0/1:8,0:8:20.97:63,0,21	0/1:18,0:13:5.55:111,0,6	0/1:15,0:15:21.82:55,0,22	1/1:13,13:24:4.54:329,5,0	0/0:21,0:21:48.43:0,48,647	0/0:18,0:17:42.98:0,43,555	0/0:49,0:48:99:0,117,1580	0/0:25,0:25:59.22:0,59,838	0/0:26,0:25:62.37:0,62,575	0/0:26,0:25:55.89:0,56,548	0/0:11,0:11:25.61:0,26,271
chr10	24842479	.	GGAGAGA	G	7436.60	PASS	AB=1.000;AC=38;AF=0.679;AN=56;BaseQRankSum=-2.866;DP=667;FS=1.187;HRun=0;HaplotypeScore=203.7815;InbreedingCoeff=0.7459;MQ=64.04;MQ0=23;MQRankSum=-1.688;QD=18.36;ReadPosRankSum=1.848;VQSLOD=4.4646;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:27.58:0,28,439	1/1:5,5:10:21.07:404,21,0	0/0:49,0:24:6.01:0,6,64	0/0:79,0:34:9.26:0,9,64	1/1:12,9:21:4.70:69,5,0	1/1:14,8:22:23.30:456,23,0	1/1:14,6:20:26.98:489,27,0	0/0:29,0:32:48.76:0,49,488	1/1:7,9:16:18.06:356,18,0	1/1:13,6:19:30.10:585,30,0	1/1:17,4:21:15:227,15,0	1/1:23,6:29:43.54:738,44,0	1/1:15,6:21:20.58:412,21,0	1/1:8,12:19:33.11:555,33,0	0/0:21,0:21:21.07:0,21,522	1/1:14,13:27:42.14:813,42,0	0/1:15,0:15:15.06:15,0,95	0/0:10,0:8:16.58:0,17,192	0/0:20,0:17:30.48:0,30,311	0/1:22,0:21:5.99:6,0,126	0/0:18,0:18:6.28:0,6,36	1/1:14,9:24:14.51:239,15,0	1/1:8,12:20:9.02:150,9,0	1/1:23,6:29:18.06:343,18,0	1/1:13,10:22:20.98:348,21,0	1/1:14,7:20:39.13:757,39,0	1/1:12,6:18:15.09:422,15,0	1/1:4,0:3:3.01:54,3,0
chr10	24842507	.	AGATG	A	1073.19	PASS	AB=0.993;AC=20;AF=0.357;AN=56;BaseQRankSum=-1.414;DP=610;FS=20.982;HRun=0;HaplotypeScore=201.9721;InbreedingCoeff=0.0655;MQ=46.49;MQ0=55;MQRankSum=1.081;QD=2.79;ReadPosRankSum=-2.799;VQSLOD=0.4557;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:29:99:106,0,464	0/0:8,0:8:15.29:0,15,100	0/1:48,0:7:17.64:18,0,63	0/1:80,0:11:5.73:6,0,58	0/0:27,0:27:35.75:0,36,494	0/1:19,0:19:10.22:10,0,248	0/1:22,0:22:13.04:13,0,452	0/0:27,0:26:44.32:0,44,887	0/0:18,0:17:24.92:0,25,213	0/0:18,0:18:30.38:0,30,411	0/1:14,0:14:9.55:10,0,186	0/1:24,0:24:80.05:80,0,331	0/0:20,0:19:16.89:0,17,307	0/0:22,0:20:14.85:0,15,257	0/0:16,0:15:19.09:0,19,347	0/0:29,0:29:12.78:0,13,408	0/1:12,1:13:7.36:94,0,7	1/1:8,0:6:9.03:130,9,0	1/1:13,2:13:15.44:307,15,0	1/1:17,2:18:13.74:182,14,0	1/1:12,0:11:14.80:196,15,0	0/1:17,0:17:28.65:29,0,55	0/0:18,0:18:3.50:0,4,181	0/1:24,0:24:51.70:52,0,285	0/0:19,0:19:8.83:0,9,218	0/1:23,0:22:11.60:12,0,435	0/1:16,0:16:5.11:5,0,261	0/0:3,0:3:8.89:0,9,100
chr10	24842509	.	ATG	A	1237.61	PASS	AB=0.958;AC=21;AF=0.375;AN=56;BaseQRankSum=-2.053;DP=604;FS=17.057;HRun=0;HaplotypeScore=189.8503;InbreedingCoeff=0.0756;MQ=46.68;MQ0=55;MQRankSum=0.365;QD=3.07;ReadPosRankSum=-4.065;VQSLOD=0.8485;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:21,8:29:99:235,0,382	0/0:7,0:7:17.47:0,17,151	0/1:45,1:7:26.27:26,0,50	0/1:74,0:11:4.79:5,0,116	0/0:25,1:26:35.87:0,36,514	0/1:19,0:19:7.68:8,0,293	0/1:21,1:22:2.27:2,0,524	0/1:27,1:27:1.53:2,0,847	0/0:18,0:17:28.50:0,28,265	0/0:19,0:19:30.38:0,30,632	0/1:14,1:15:7.59:8,0,246	0/1:22,0:22:99:113,0,379	0/0:19,1:19:29.89:0,30,376	0/0:23,0:21:24.94:0,25,349	0/0:17,0:16:16.56:0,17,232	0/0:27,1:28:28.28:0,28,537	0/1:13,2:15:5.93:109,0,6	1/1:6,1:5:9.03:130,9,0	1/1:11,2:11:14.11:235,14,0	1/1:16,4:19:11.86:203,12,0	1/1:10,2:11:14.86:196,15,0	0/1:16,0:16:41.95:42,0,69	0/1:18,0:18:8.29:8,0,179	0/1:24,0:24:76.06:76,0,285	0/0:19,0:19:8.70:0,9,238	0/0:21,0:20:17.11:0,17,548	0/1:15,0:15:12.02:12,0,305	0/0:3,0:3:9.02:0,9,113
chr10	24842519	.	AGATG	A	764.75	PASS	AB=0.950;AC=10;AF=0.179;AN=56;BaseQRankSum=5.539;DP=616;FS=7.062;HRun=0;HaplotypeScore=207.0048;InbreedingCoeff=0.7385;MQ=48.25;MQ0=57;MQRankSum=-4.906;QD=10.20;ReadPosRankSum=-1.263;VQSLOD=2.3412;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:41.83:0,42,817	0/0:7,0:7:18.06:0,18,337	0/0:58,0:9:8.21:0,8,238	0/0:89,0:15:7.04:0,7,218	0/0:27,0:27:38.94:0,39,1003	0/0:20,0:20:41.72:0,42,810	0/0:23,0:23:9.78:0,10,1049	0/0:25,0:24:63.20:0,63,1342	0/0:20,0:19:39.06:0,39,729	0/0:19,0:19:50.21:0,50,1232	0/0:15,0:15:23.69:0,24,591	0/0:21,0:21:51.06:0,51,965	0/0:18,0:17:39:0,39,830	0/0:23,0:21:40.86:0,41,869	0/1:17,0:16:7.37:7,0,129	0/0:28,0:28:66.05:0,66,1301	1/1:8,8:16:31.04:418,31,0	1/1:3,2:3:7.73:58,8,0	1/1:6,5:10:24.17:340,24,0	1/1:10,7:16:5.03:90,5,0	0/1:8,1:8:0.19:0,0,0	0/0:18,0:18:17.09:0,17,369	0/0:16,0:16:14.92:0,15,347	0/0:25,0:25:32.92:0,33,820	0/0:22,0:22:39.13:0,39,767	0/0:21,0:20:60.12:0,60,1330	0/0:15,0:15:26.97:0,27,660	0/0:3,0:3:9.03:0,9,203
chr10	24842521	.	ATG	A	558.85	PASS	AB=0.967;AC=11;AF=0.196;AN=56;BaseQRankSum=5.988;DP=618;FS=6.995;HRun=0;HaplotypeScore=194.9810;InbreedingCoeff=0.6825;MQ=48.37;MQ0=59;MQRankSum=-5.466;QD=3.41;ReadPosRankSum=-1.000;VQSLOD=2.0382;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,1:28:42.24:0,42,664	0/0:7,0:7:18.06:0,18,290	0/0:58,0:9:14.86:0,15,202	0/1:88,0:15:6.52:7,0,147	0/0:27,0:27:38.89:0,39,773	0/0:20,0:20:41.86:0,42,680	0/0:22,0:22:47.83:0,48,880	0/0:23,0:21:63.21:0,63,1098	0/0:18,1:18:39.04:0,39,625	0/0:19,0:19:50.19:0,50,1012	0/0:17,0:17:23.68:0,24,442	0/0:19,0:20:51.06:0,51,835	0/0:18,0:17:38.94:0,39,686	0/0:24,0:22:43.87:0,44,764	0/1:17,0:16:14.78:15,0,99	0/0:28,0:28:66.07:0,66,1150	1/1:15,1:16:29.75:301,30,0	1/1:5,0:3:6.93:55,7,0	1/1:9,2:10:25.53:243,26,0	1/1:17,0:16:5.39:92,5,0	0/1:8,1:8:0.17:0,0,0	0/0:18,0:18:17.08:0,17,285	0/0:17,0:17:17.19:0,17,300	0/0:26,0:25:32.92:0,33,641	0/0:23,0:22:39.13:0,39,645	0/0:21,0:20:60.12:0,60,1098	0/0:16,0:16:30.02:0,30,589	0/0:3,0:3:9.03:0,9,161
chr10	24842523	.	GGA	G	139.94	PASS	AB=1.000;AC=4;AF=0.071;AN=56;BaseQRankSum=6.023;DP=622;FS=0.897;HRun=0;HaplotypeScore=196.9553;InbreedingCoeff=0.4357;MQ=48.64;MQ0=58;MQRankSum=-4.699;QD=3.11;ReadPosRankSum=-0.876;VQSLOD=2.6940;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:28.59:0,29,403	0/0:7,0:7:9.03:0,9,151	0/0:58,0:9:17.07:0,17,217	0/0:87,0:15:7.52:0,8,120	0/0:27,0:27:42.08:0,42,673	0/0:22,0:22:24.06:0,24,404	0/0:22,0:22:38.70:0,39,607	0/0:23,0:21:45.10:0,45,643	0/0:19,0:18:24.06:0,24,403	0/0:19,0:19:53.80:0,54,770	0/0:18,0:18:24.08:0,24,404	0/0:20,0:20:41.73:0,42,649	0/0:18,0:17:33.10:0,33,524	0/0:26,0:24:33.11:0,33,549	1/1:5,12:16:20.68:199,21,0	0/0:27,0:27:56.78:0,57,902	0/1:16,0:16:5.95:24,0,6	0/0:6,0:4:2.88:0,3,19	0/1:12,0:11:29.66:30,0,37	0/0:17,0:16:1.29:0,1,4	0/0:10,0:9:0:0,0,0	0/0:17,0:17:15.05:0,15,251	0/0:17,0:17:15.05:0,15,252	0/0:26,0:25:33.11:0,33,551	0/0:23,0:22:30.02:0,30,472	0/0:20,0:19:57.13:0,57,887	0/0:16,0:16:32.61:0,33,526	0/0:3,0:3:6.02:0,6,101
chr10	24842534	.	GAC	G	72.79	PASS	AB=0.919;AC=6;AF=0.107;AN=56;BaseQRankSum=4.570;DP=588;FS=0.000;HRun=0;HaplotypeScore=188.8656;InbreedingCoeff=0.1918;MQ=51.34;MQ0=32;MQRankSum=-4.383;QD=0.91;ReadPosRankSum=-4.417;VQSLOD=0.8301;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:26:26.10:26,0,362	0/0:8,0:8:9.03:0,9,164	0/0:41,0:9:18.09:0,18,203	0/0:73,0:15:5.13:0,5,119	0/0:24,0:24:39.12:0,39,706	0/0:22,0:21:23.82:0,24,441	0/0:21,0:21:38.82:0,39,641	0/0:21,0:15:25.37:0,25,570	0/0:16,0:15:24.05:0,24,443	0/0:19,0:19:49.61:0,50,734	0/0:20,0:20:24.08:0,24,447	0/0:20,0:20:46.31:0,46,705	0/0:18,0:17:32.14:0,32,550	0/0:24,0:22:35.33:0,35,608	1/1:17,0:16:19.92:103,20,0	0/0:28,0:28:58.36:0,58,972	0/1:16,1:17:5.73:6,0,139	0/1:5,1:4:14.80:29,0,15	0/1:12,2:13:33.86:34,0,127	0/0:13,1:15:5.01:0,5,38	0/0:11,2:12:2.96:0,3,19	0/0:15,0:15:15.05:0,15,272	0/0:15,0:15:17.27:0,17,280	0/0:25,0:24:35.47:0,35,584	0/0:24,0:23:26.83:0,27,504	0/0:22,0:21:53.73:0,54,902	0/0:19,0:19:32.33:0,32,557	0/0:3,0:3:6.02:0,6,115
chr10	24842554	.	CAGAGACAGAG	C	2075.19	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=-5.619;DP=572;FS=3.470;HRun=0;HaplotypeScore=201.1011;InbreedingCoeff=-0.0199;MQ=55.67;MQ0=24;MQRankSum=-1.643;QD=9.48;ReadPosRankSum=-6.773;VQSLOD=0.6750;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:35.37:0,35,350	0/0:7,0:7:6.01:0,6,73	0/0:34,0:11:6.53:0,7,140	0/0:72,0:18:20.59:0,21,189	0/1:26,0:25:99:246,0,523	0/0:22,0:21:20.99:0,21,272	0/0:24,0:24:26.85:0,27,297	1/1:33,0:25:21.99:629,22,0	0/0:15,0:15:21.01:0,21,324	0/1:17,0:17:99:103,0,499	0/1:20,0:19:58.90:59,0,201	0/1:20,0:20:27.85:28,0,501	0/0:14,0:14:26.94:0,27,332	0/0:20,0:19:20.57:0,21,498	1/1:10,6:16:33.10:748,33,0	0/0:30,0:30:53.80:0,54,648	0/1:21,0:21:99:137,0,221	0/1:8,0:7:46.74:85,0,47	0/0:10,0:9:9.76:0,10,111	0/1:12,0:12:16.38:16,0,54	0/1:12,0:11:14.28:43,0,14	0/0:9,0:9:15.04:0,15,210	0/1:12,0:12:11.12:11,0,146	0/0:23,0:21:33.07:0,33,476	0/0:22,0:21:27.06:0,27,386	0/1:18,0:17:97.75:98,0,456	0/0:22,0:22:25.13:0,25,299	0/1:4,0:4:40.46:40,0,81
chr10	24842560	.	CAGAG	C	7776.97	PASS	AB=0.837;AC=48;AF=0.857;AN=56;BaseQRankSum=-5.606;DP=572;FS=6.382;HRun=0;HaplotypeScore=134.6998;InbreedingCoeff=0.2735;MQ=62.72;MQ0=25;MQRankSum=1.172;QD=17.48;ReadPosRankSum=5.867;VQSLOD=4.0572;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:28:35.37:35,0,49	1/1:2,3:5:3.01:50,3,0	0/0:45,0:11:14.88:0,15,203	0/0:82,0:25:9.01:0,9,202	1/1:20,5:24:46.49:724,46,0	1/1:5,16:20:15.05:251,15,0	1/1:7,15:22:9.02:127,9,0	1/1:27,0:20:10.45:560,10,0	1/1:2,13:15:14.94:250,15,0	1/1:3,11:15:33.08:499,33,0	1/1:10,10:19:11.83:186,12,0	1/1:12,7:20:36.12:571,36,0	1/1:5,10:15:17.70:300,18,0	1/1:8,11:18:21.07:348,21,0	1/1:13,0:13:30.02:408,30,0	1/1:7,19:27:16.13:603,16,0	0/1:22,0:22:4.91:314,0,5	0/1:8,0:7:31.79:114,0,32	1/1:11,0:10:11.82:137,12,0	1/1:11,0:11:7.43:93,7,0	1/1:11,0:10:5.58:67,6,0	0/1:0,8:9:13:185,0,13	1/1:3,8:11:12.04:200,12,0	1/1:3,19:20:33.11:551,33,0	1/1:3,19:22:21.07:351,21,0	1/1:16,4:18:35.78:588,36,0	1/1:8,13:21:1.21:187,1,0	1/1:5,0:5:6.01:75,6,0
chr10	24842564	.	G	GAC	3547.35	PASS	AB=0.875;AC=21;AF=0.375;AN=56;BaseQRankSum=-4.546;DP=589;FS=0.000;HRun=0;HaplotypeScore=139.4893;InbreedingCoeff=0.1040;MQ=63.64;MQ0=25;MQRankSum=-1.351;QD=13.34;ReadPosRankSum=-1.022;VQSLOD=3.3533;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:37.34:0,37,221	0/0:4,0:4:5.67:0,6,36	0/0:51,0:18:12.86:0,13,220	0/0:91,0:29:25.96:0,26,264	0/1:19,7:25:99:354,0,165	0/0:21,0:20:16.38:0,16,80	0/0:20,0:20:17.24:0,17,114	0/1:15,18:27:67.22:652,0,67	0/0:15,0:15:16.20:0,16,74	0/1:16,0:16:99:126,0,161	0/1:20,0:19:62.56:63,0,98	0/1:17,2:20:99:114,0,112	0/0:14,0:14:21.71:0,22,102	0/1:19,0:18:3.20:3,0,119	1/1:8,4:12:30.10:511,30,0	0/0:26,0:26:9.83:0,10,172	1/1:6,16:22:44.47:753,44,0	0/1:4,4:7:16.88:151,0,17	1/1:7,3:9:6.20:224,6,0	1/1:4,8:12:8.90:169,9,0	1/1:3,10:13:6:111,6,0	0/0:9,0:9:13.72:0,14,73	0/1:9,0:9:11.16:11,0,42	0/0:22,0:20:4.58:0,5,87	0/0:22,0:21:24.74:0,25,128	0/1:13,7:18:99:249,0,110	0/1:18,0:18:9.26:9,0,94	0/1:6,1:7:17.95:48,0,18
chr10	24842674	.	GAAA	G	3052.34	PASS	AB=0.798;AC=40;AF=0.714;AN=56;BaseQRankSum=1.046;DP=410;FS=12.544;HRun=16;HaplotypeScore=66.5836;InbreedingCoeff=0.6028;MQ=44.35;MQ0=23;MQRankSum=-2.451;QD=11.79;ReadPosRankSum=4.580;VQSLOD=-0.4280;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:13,3:21:24.23:49,0,24	1/1:5,1:6:8.90:82,9,0	0/0:23,0:2:0:0,0,0	0/0:27,0:1:0:0,0,0	1/1:8,7:16:26.75:260,27,0	1/1:8,8:15:26.99:289,27,0	1/1:4,3:8:13.11:124,13,0	0/0:20,0:19:14.20:0,14,60	1/1:5,1:8:1.39:29,1,0	1/1:9,2:9:2.79:32,3,0	1/1:9,8:19:22.40:266,22,0	1/1:7,1:7:11.86:100,12,0	1/1:6,3:11:11.73:99,12,0	1/1:7,3:12:11.88:125,12,0	1/1:9,4:14:27.32:294,27,0	1/1:2,3:6:13.42:132,13,0	0/0:22,0:22:36.04:0,36,495	0/0:12,0:12:27.05:0,27,385	0/1:16,1:16:11.06:11,0,223	0/0:20,1:22:9.80:0,10,516	0/0:16,0:16:21.06:0,21,326	1/1:8,5:13:23.87:255,24,0	1/1:10,5:14:26.83:264,27,0	1/1:7,3:10:7.79:88,8,0	1/1:2,7:9:23.95:244,24,0	1/1:10,5:16:23.81:243,24,0	1/1:7,6:13:20.56:210,21,0	1/1:1,1:2:1.39:29,1,0
chr10	24842695	.	CAA	C	4783.97	PASS	AB=0.626;AC=38;AF=0.679;AN=56;BaseQRankSum=-0.546;DP=497;FS=11.769;HRun=14;HaplotypeScore=84.2784;InbreedingCoeff=0.8120;MQ=51.05;MQ0=26;MQRankSum=-3.034;QD=14.67;ReadPosRankSum=2.560;VQSLOD=2.8007;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:12,11:21:34.90:270,35,0	1/1:3,6:8:14.98:139,15,0	0/0:32,0:7:17.98:0,18,178	0/0:29,0:10:12.02:0,12,122	1/1:4,17:24:41.48:460,41,0	1/1:4,11:16:18.95:282,19,0	1/1:4,6:10:17.95:166,18,0	1/1:7,2:19:34.69:162,35,0	1/1:3,7:10:17.98:166,18,0	1/1:2,11:14:28.47:299,28,0	1/1:9,15:25:8.33:380,8,0	0/1:5,11:16:9.33:229,0,9	1/1:4,6:10:14.95:139,15,0	1/1:6,12:18:38.25:311,38,0	0/0:22,0:20:45.07:0,45,543	1/1:3,11:14:32.63:289,33,0	0/0:11,0:23:21.51:0,22,237	0/0:15,0:15:23.99:0,24,259	0/0:11,0:15:35.88:0,36,371	0/0:10,0:23:48.06:0,48,515	0/0:2,0:9:14.97:0,15,130	1/1:7,8:14:20.93:194,21,0	1/1:7,7:14:2.78:74,3,0	1/1:4,5:10:8.79:130,9,0	1/1:7,11:20:22.07:274,22,0	1/1:3,16:21:50.50:440,51,0	1/1:2,16:18:36.01:333,36,0	0/1:3,2:5:1.31:46,0,1
chr10	24843302	.	TA	T	2013.90	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=10.131;DP=648;FS=3.267;HRun=9;HaplotypeScore=62.4196;InbreedingCoeff=0.9869;MQ=71.67;MQ0=0;MQRankSum=-0.601;QD=22.13;ReadPosRankSum=1.212;VQSLOD=4.5791;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:45.05:0,45,490	0/0:13,0:13:39.11:0,39,442	0/0:9,0:9:18.90:0,19,225	0/0:8,1:9:14.99:0,15,146	0/0:42,0:42:99:0,111,1273	0/0:22,0:22:51.14:0,51,578	0/0:19,0:19:45.12:0,45,510	0/0:24,1:25:57.17:0,57,658	0/0:26,0:26:72.18:0,72,803	0/0:28,0:28:78.22:0,78,884	0/0:25,0:25:69.19:0,69,786	0/0:22,0:22:57.16:0,57,649	0/0:34,0:34:90.26:0,90,1029	0/0:30,0:31:87.09:0,87,982	0/0:22,0:22:57.17:0,57,658	0/0:26,0:26:72.20:0,72,823	1/1:2,20:22:54.03:494,54,0	1/1:1,8:9:24.01:220,24,0	1/1:2,12:14:35.98:322,36,0	1/1:2,34:36:99:906,99,0	1/1:0,10:10:27.01:247,27,0	0/0:24,0:24:72.21:0,72,831	0/0:34,0:34:87.26:0,87,1004	0/0:27,0:26:78.22:0,78,891	0/0:35,0:35:99:0,99,1143	0/0:26,0:26:72.21:0,72,831	0/0:36,0:36:99:0,102,1147	0/0:5,0:5:12.04:0,12,138
chr10	24844073	.	TA	T	1966.51	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=10.057;DP=454;FS=0.000;HRun=3;HaplotypeScore=41.7431;InbreedingCoeff=0.9259;MQ=69.80;MQ0=0;MQRankSum=0.372;QD=30.25;ReadPosRankSum=0.855;VQSLOD=2.7266;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:48.14:0,48,661	0/0:10,0:10:30.07:0,30,379	0/0:6,0:6:1.89:0,2,35	0/0:5,0:5:11.28:0,11,81	0/0:31,0:31:90.27:0,90,1241	0/0:13,0:13:39.10:0,39,520	0/0:9,0:9:27.08:0,27,370	0/0:23,0:23:63.19:0,63,862	0/0:12,0:12:36.04:0,36,442	0/0:21,0:21:63.18:0,63,884	0/0:34,0:34:99:0,99,1415	0/0:18,0:18:54.16:0,54,756	0/0:35,0:35:96.31:0,96,1361	0/0:10,0:10:30.07:0,30,394	0/0:19,0:19:57.19:0,57,820	0/0:16,0:16:48.14:0,48,658	1/1:1,19:20:45.14:556,45,0	1/1:0,4:4:9.03:111,9,0	1/1:0,12:12:36.11:446,36,0	1/1:1,23:24:69.18:838,69,0	1/1:0,5:5:15.05:186,15,0	0/0:13,0:13:39.10:0,39,524	0/0:14,0:14:42.14:0,42,588	0/0:14,0:14:31.18:0,31,550	0/0:18,0:18:51.15:0,51,699	0/0:22,0:22:66.21:0,66,930	0/0:24,0:24:72.20:0,72,978	0/0:6,0:6:18.01:0,18,217
chr10	24846900	.	GCTCTCT	G	891.07	PASS	AB=1.000;AC=25;AF=0.543;AN=46;BaseQRankSum=0.609;DP=534;FS=8.658;HRun=0;HaplotypeScore=135.4625;InbreedingCoeff=0.3110;MQ=64.74;MQ0=10;MQRankSum=-3.101;QD=3.93;ReadPosRankSum=-0.099;VQSLOD=1.9069;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:25:0:0,0,0	./.	./.	0/0:39,0:18:1.36:0,1,3	0/0:24,3:27:0:0,0,0	1/1:15,1:17:2.56:41,3,0	1/1:19,1:21:3:42,3,0	0/0:23,0:21:0.47:0,0,1	1/1:18,1:20:6.02:102,6,0	1/1:18,0:18:3.26:75,3,0	0/0:16,0:14:0:0,0,0	1/1:11,2:13:9.03:170,9,0	1/1:14,0:16:6.02:84,6,0	0/1:12,0:12:0:0,0,0	0/0:25,0:26:21.07:0,21,544	1/1:18,1:19:3.01:61,3,0	0/1:20,0:19:3.68:25,0,4	0/1:10,0:10:52.10:52,0,70	0/0:20,0:19:3.01:0,3,31	0/0:15,0:15:6.02:0,6,79	0/0:38,0:37:0.47:0,0,1	1/1:21,1:22:2.22:72,2,0	./.	./.	1/1:12,0:13:2.95:19,3,0	./.	1/1:15,2:16:9.03:163,9,0	1/1:3,1:5:6.02:102,6,0
chr10	24846947	.	CT	C	239.38	PASS	AB=0.910;AC=8;AF=0.143;AN=56;BaseQRankSum=4.778;DP=471;FS=6.922;HRun=2;HaplotypeScore=88.1380;InbreedingCoeff=0.4977;MQ=35.42;MQ0=35;MQRankSum=-3.852;QD=4.20;ReadPosRankSum=-0.441;VQSLOD=0.0761;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:16,1:17:19.54:20,0,101	0/0:5,0:4:1.61:0,2,73	0/0:60,2:8:21.03:0,21,255	0/0:77,4:17:3.56:0,4,371	0/0:12,0:11:11.99:0,12,128	0/0:11,0:11:22.31:0,22,158	0/0:21,0:19:32.43:0,32,371	0/0:20,0:18:53.79:0,54,598	0/0:11,0:10:22.14:0,22,191	0/0:16,0:14:41.14:0,41,346	0/0:12,0:10:5.86:0,6,79	0/0:16,0:15:28.89:0,29,274	0/0:9,1:10:17.75:0,18,136	0/0:13,0:11:15.15:0,15,198	0/0:11,2:13:8.55:0,9,208	0/0:8,0:7:20.45:0,20,224	1/1:6,3:9:19.73:119,20,0	1/1:6,0:6:14.11:99,14,0	0/1:12,2:13:16.67:98,0,17	1/1:5,6:9:7:47,7,0	0/0:22,0:20:2.54:0,3,16	0/0:10,2:12:11.72:0,12,105	0/0:8,0:7:11.80:0,12,130	0/0:15,0:14:9.70:0,10,120	0/0:8,0:8:11.68:0,12,122	0/0:13,0:12:32.68:0,33,315	0/0:14,0:13:22.12:0,22,173	0/0:10,0:7:20.04:0,20,214
chr10	24846949	.	TC	T	431.77	PASS	AB=0.799;AC=10;AF=0.179;AN=56;BaseQRankSum=3.604;DP=476;FS=4.879;HRun=7;HaplotypeScore=87.9738;InbreedingCoeff=0.7333;MQ=35.32;MQ0=36;MQRankSum=-4.742;QD=5.68;ReadPosRankSum=-1.349;VQSLOD=0.1932;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:15,1:16:7.96:8,0,128	0/0:5,0:4:5.78:0,6,90	0/0:66,0:8:18.05:0,18,215	0/0:82,0:17:19.72:0,20,405	0/0:12,0:11:11.83:0,12,148	0/0:11,0:11:14.71:0,15,150	0/0:22,0:19:29.79:0,30,365	0/0:19,0:17:39.12:0,39,491	0/0:11,0:10:17.91:0,18,207	0/0:16,0:14:21.04:0,21,241	0/0:13,0:11:9.27:0,9,94	0/0:16,0:15:33.26:0,33,346	0/0:10,0:10:18.30:0,18,168	0/0:13,0:11:11.66:0,12,201	0/0:15,0:15:21.92:0,22,249	0/0:9,0:8:21.06:0,21,253	1/1:7,2:9:19.40:148,19,0	1/1:3,2:5:14.99:136,15,0	1/1:10,5:14:26.20:231,26,0	1/1:8,2:9:6.90:63,7,0	0/1:10,11:19:0.36:0,0,1	0/0:13,0:12:8.74:0,9,96	0/0:8,0:7:11.84:0,12,148	0/0:14,0:13:14.38:0,14,131	0/0:8,0:8:12.04:0,12,145	0/0:13,0:12:32.94:0,33,337	0/0:14,0:13:24.12:0,24,240	0/0:10,0:7:21.05:0,21,244
chr10	24846991	.	TCTCTCTCTCC	T	2318.47	PASS	AB=0.986;AC=25;AF=0.446;AN=56;BaseQRankSum=-3.650;DP=503;FS=6.614;HRun=0;HaplotypeScore=163.5988;InbreedingCoeff=-0.5511;MQ=41.18;MQ0=42;MQRankSum=3.345;QD=6.92;ReadPosRankSum=-7.003;VQSLOD=-0.3573;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:15,3:18:5.80:427,0,6	0/1:5,0:4:10.95:11,0,112	0/0:62,0:7:7.20:0,7,114	0/0:70,0:14:19.36:0,19,256	0/1:19,0:18:55.65:92,0,56	0/1:13,0:13:72.58:73,0,280	0/1:22,0:18:78.35:78,0,395	0/1:14,0:12:76.97:77,0,169	0/1:11,0:11:58.91:59,0,208	0/1:16,0:14:70.06:70,0,489	0/1:17,0:17:85.93:86,0,145	0/1:16,0:15:16.92:17,0,408	0/1:12,0:12:34.88:35,0,255	0/1:12,0:12:30.98:31,0,348	0/0:14,0:14:3.62:0,4,103	0/1:8,0:8:52.95:53,0,268	0/1:13,3:16:99:382,0,121	0/1:7,0:6:94.47:130,0,94	1/1:8,0:5:14.36:177,14,0	1/1:24,0:24:32.17:256,32,0	0/0:6,2:8:0:0,0,1	0/1:21,0:21:41.01:41,0,274	0/1:14,0:13:85.75:86,0,138	0/0:13,0:9:9.50:0,10,199	0/1:14,0:14:89.45:89,0,161	0/1:23,0:21:49.66:50,0,1014	0/1:16,0:16:62.56:63,0,303	0/1:9,0:8:94.75:95,0,178
chr10	24846999	.	TCC	T	4586.69	PASS	AB=0.986;AC=45;AF=0.804;AN=56;BaseQRankSum=-1.061;DP=500;FS=19.501;HRun=4;HaplotypeScore=120.7784;InbreedingCoeff=0.2047;MQ=46.58;MQ0=33;MQRankSum=4.713;QD=12.57;ReadPosRankSum=1.216;VQSLOD=0.9903;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:18:18.22:218,18,0	1/1:4,0:4:11.96:109,12,0	0/0:66,0:12:13.79:0,14,197	0/0:65,0:14:6.03:0,6,97	1/1:16,1:16:30.35:242,30,0	1/1:8,2:10:14.19:156,14,0	1/1:21,2:20:9.96:228,10,0	0/1:15,0:13:10.79:181,0,11	0/1:10,0:10:0.35:61,0,0	1/1:14,0:13:9.50:219,9,0	1/1:19,0:19:22.39:207,22,0	1/1:13,2:14:29.79:280,30,0	1/1:12,1:13:26.56:227,27,0	1/1:13,0:13:29.25:262,29,0	1/1:2,13:15:2.91:46,3,0	1/1:5,3:8:24.03:267,24,0	0/1:12,0:15:23.16:163,0,23	0/1:6,0:6:32.34:45,0,32	1/1:7,0:5:14.35:114,14,0	1/1:25,0:25:31.03:225,31,0	0/1:7,0:8:0:0,0,0	1/1:19,2:21:35.68:316,36,0	1/1:16,0:15:29.86:236,30,0	1/1:10,0:9:11.92:110,12,0	1/1:13,0:13:25.59:209,26,0	0/1:22,0:21:29.64:251,0,30	0/1:16,0:17:27.24:77,0,27	1/1:9,0:8:1.07:137,1,0
chr10	24847006	.	CTT	C	1997.93	PASS	AB=1.000;AC=33;AF=0.589;AN=56;BaseQRankSum=-2.865;DP=533;FS=0.515;HRun=2;HaplotypeScore=133.2581;InbreedingCoeff=0.2792;MQ=52.06;MQ0=31;MQRankSum=4.477;QD=6.30;ReadPosRankSum=6.450;VQSLOD=0.0547;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:17,0:17:5.05:111,0,5	1/1:3,1:4:11.53:85,12,0	0/0:78,0:20:56.24:0,56,785	0/0:68,0:17:20.13:0,20,238	1/1:18,0:18:34.65:169,35,0	1/1:10,0:10:22.06:121,22,0	0/1:22,0:19:49.78:86,0,50	0/1:17,0:15:48.39:48,0,64	0/1:11,0:11:8.55:41,0,9	0/1:14,0:13:41.24:58,0,41	1/1:18,0:18:23.05:129,23,0	0/1:15,0:15:13.22:122,0,13	1/1:14,1:16:7.02:134,7,0	0/1:15,0:15:6.92:101,0,7	0/1:19,0:19:13.62:14,0,163	1/1:13,2:15:6.18:197,6,0	0/0:18,0:18:13.08:0,13,71	0/0:5,0:4:8.15:0,8,39	0/0:11,0:9:12.42:0,12,96	0/0:25,0:25:23.75:0,24,95	0/0:10,0:10:8.71:0,9,33	1/1:19,0:19:7.60:101,8,0	1/1:16,0:15:1.23:93,1,0	1/1:11,0:10:14.04:90,14,0	1/1:12,0:12:8.07:100,8,0	1/1:21,0:19:22.74:200,23,0	1/1:14,0:16:24.49:128,24,0	0/1:11,0:10:7.25:58,0,7
chr10	24847007	.	TTC	T	7099.58	PASS	AB=0.804;AC=50;AF=0.893;AN=56;BaseQRankSum=1.922;DP=533;FS=10.654;HRun=0;HaplotypeScore=117.6039;InbreedingCoeff=0.6003;MQ=52.08;MQ0=30;MQRankSum=1.261;QD=16.36;ReadPosRankSum=5.790;VQSLOD=4.2923;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,14:17:36.03:420,36,0	1/1:1,3:4:12.04:145,12,0	0/0:79,0:21:49.59:0,50,599	0/1:69,0:17:11.72:12,0,98	1/1:3,15:18:44.57:516,45,0	1/1:0,10:10:24.07:293,24,0	1/1:8,14:19:23.83:293,24,0	0/1:6,11:15:1.28:340,0,1	1/1:3,7:11:23.53:228,24,0	1/1:3,10:13:27.08:330,27,0	1/1:3,16:19:35.79:439,36,0	1/1:4,10:14:30.03:346,30,0	1/1:6,10:16:22.86:237,23,0	1/1:2,12:15:26.66:313,27,0	0/0:20,0:20:10.02:0,10,257	1/1:4,11:15:33.08:380,33,0	1/1:5,0:18:28.45:143,28,0	1/1:4,0:4:2.84:14,3,0	1/1:5,0:9:13.30:60,13,0	1/1:1,0:25:28.87:141,29,0	1/1:4,0:10:10.20:44,10,0	1/1:4,15:19:42.02:478,42,0	1/1:4,11:15:32.78:380,33,0	1/1:4,7:10:15.03:170,15,0	1/1:1,11:12:27.08:330,27,0	1/1:5,15:19:47.72:568,48,0	1/1:3,13:16:23.98:262,24,0	1/1:2,9:10:18.06:220,18,0
chr10	24850730	.	GT	G	15159.54	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-3.838;DP=528;FS=0.000;HRun=5;HaplotypeScore=55.1020;InbreedingCoeff=0.8955;MQ=76.38;MQ0=0;MQRankSum=-8.259;QD=30.20;ReadPosRankSum=5.196;VQSLOD=4.9168;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,17:18:51.14:577,51,0	1/1:1,7:8:21.06:238,21,0	0/0:17,0:17:48.16:0,48,633	0/0:9,0:9:24.08:0,24,326	1/1:1,17:18:45.13:507,45,0	1/1:1,24:25:69.20:781,69,0	1/1:1,12:13:30.09:340,30,0	1/1:4,33:37:99:1091,99,0	1/1:0,23:23:63.18:714,63,0	1/1:0,21:21:63.14:690,63,0	1/1:1,22:23:60.17:679,60,0	1/1:1,21:22:57.16:646,57,0	1/1:1,19:20:54.15:612,54,0	1/1:0,23:23:66.19:748,66,0	1/1:0,20:20:60.17:680,60,0	1/1:0,22:22:60.17:680,60,0	1/1:0,17:17:48.14:544,48,0	1/1:3,6:9:5.70:68,6,0	1/1:1,13:14:39.11:442,39,0	1/1:1,16:17:48.14:544,48,0	1/1:0,19:19:57.16:646,57,0	1/1:1,15:16:45.13:509,45,0	1/1:1,15:16:45.13:510,45,0	1/1:0,17:17:39.11:441,39,0	1/1:1,22:23:57.16:646,57,0	1/1:2,24:26:72.19:806,72,0	1/1:2,30:32:84.24:952,84,0	1/1:0,3:3:6.02:68,6,0
chr10	24850947	.	A	ATGTCTCAAAACCATCACAACAGGAC	2074.48	PASS	AB=0.763;AC=22;AF=0.917;AN=24;BaseQRankSum=-2.167;DP=41;FS=13.819;HRun=0;HaplotypeScore=37.6572;InbreedingCoeff=-0.1351;MQ=152.80;MQ0=0;MQRankSum=-0.241;QD=62.86;ReadPosRankSum=-0.642;VQSLOD=0.6803;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/1:5,0:9:1.50:977,0,2	0/1:4,1:5:29.87:568,0,30	1/1:3,0:3:3.01:92,3,0	1/1:4,0:4:6.02:141,6,0	./.	1/1:1,0:1:3:27,3,0	./.	1/1:2,0:2:0.47:1,0,0	1/1:1,0:1:3.01:92,3,0	./.	./.	./.	./.	./.	./.	./.	1/1:4,0:4:5.97:46,6,0	1/1:1,0:1:3:25,3,0	1/1:1,0:1:3.01:39,3,0	1/1:1,0:1:3.01:73,3,0	./.	./.	./.	./.	1/1:1,0:1:3.01:73,3,0	./.
chr10	24852511	.	GT	G	7781.90	PASS	AB=0.745;AC=28;AF=0.500;AN=56;BaseQRankSum=19.497;DP=864;FS=18.038;HRun=2;HaplotypeScore=154.7842;InbreedingCoeff=-1.0000;MQ=67.53;MQ0=0;MQRankSum=-13.808;QD=9.01;ReadPosRankSum=0.150;VQSLOD=1.2006;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:33,11:44:99:229,0,1244	0/1:5,6:11:99:164,0,195	0/1:17,3:20:68.90:69,0,483	0/1:25,2:26:31.81:32,0,602	0/1:26,26:52:99:599,0,1002	0/1:31,18:49:99:340,0,1222	0/1:28,8:36:99:167,0,1152	0/1:26,22:47:99:664,0,859	0/1:17,11:28:99:306,0,570	0/1:22,13:35:99:401,0,855	0/1:12,13:25:99:289,0,389	0/1:21,10:31:99:295,0,851	0/1:19,12:31:99:268,0,724	0/1:12,10:22:99:253,0,412	0/1:17,16:33:99:379,0,676	0/1:17,10:27:99:271,0,666	0/1:25,14:39:99:389,0,918	0/1:17,6:23:99:131,0,649	0/1:14,9:23:99:266,0,514	0/1:24,14:38:99:394,0,948	0/1:19,6:25:99:123,0,756	0/1:16,8:24:99:247,0,499	0/1:16,8:24:99:202,0,607	0/1:18,8:26:99:197,0,732	0/1:20,12:32:99:334,0,806	0/1:30,11:41:99:290,0,1206	0/1:26,13:38:99:354,0,968	0/1:7,4:11:99:129,0,198
chr10	24852567	.	CACAT	C	4170.63	PASS	AB=0.997;AC=34;AF=0.607;AN=56;BaseQRankSum=-3.714;DP=560;FS=0.447;HRun=0;HaplotypeScore=144.1545;InbreedingCoeff=-0.3458;MQ=52.57;MQ0=14;MQRankSum=1.804;QD=8.51;ReadPosRankSum=-2.449;VQSLOD=2.6076;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:37,0:36:99:126,0,102	0/1:11,0:10:30.68:80,0,31	0/0:38,0:22:56.74:0,57,558	0/0:32,0:21:40.30:0,40,446	0/1:18,0:17:36.54:163,0,37	0/1:29,0:27:31.98:197,0,32	1/1:18,0:17:24.34:192,24,0	1/1:19,0:16:39.29:318,39,0	0/1:16,0:14:43.10:78,0,43	0/1:15,0:16:99:135,0,104	1/1:9,0:9:5.92:41,6,0	0/1:20,0:19:51.37:86,0,51	0/1:13,0:13:43.07:118,0,43	0/1:17,0:17:25.26:25,0,75	0/1:24,0:24:99:143,0,203	0/1:13,0:12:55.90:56,0,111	1/1:29,0:29:48.93:306,49,0	1/1:17,2:18:43.16:381,43,0	1/1:11,0:11:26.94:228,27,0	1/1:30,2:31:67.37:562,67,0	1/1:19,0:18:32.20:263,32,0	0/1:11,0:9:5.07:59,0,5	0/1:13,0:13:63.18:63,0,82	0/1:28,0:28:53.59:135,0,54	0/1:20,0:18:40.80:59,0,41	0/1:22,0:21:99:172,0,213	0/1:14,0:14:99:105,0,155	0/1:12,0:12:78.99:79,0,132
chr10	24852569	.	CAT	C	5609.84	PASS	AB=0.995;AC=45;AF=0.804;AN=56;BaseQRankSum=-0.702;DP=548;FS=16.513;HRun=0;HaplotypeScore=122.0728;InbreedingCoeff=0.1852;MQ=50.28;MQ0=14;MQRankSum=0.075;QD=11.69;ReadPosRankSum=-2.507;VQSLOD=3.3081;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:37,0:36:7.89:165,8,0	1/1:11,0:10:0.97:82,1,0	0/0:37,0:20:56.57:0,57,557	0/0:31,0:20:40.30:0,40,446	1/1:18,0:17:12.46:198,12,0	1/1:28,0:26:32.59:252,33,0	1/1:16,0:15:26.66:217,27,0	1/1:18,0:15:41.84:341,42,0	1/1:17,0:15:18.39:139,18,0	0/1:16,0:16:4.22:179,0,4	1/1:9,0:9:5.92:41,6,0	1/1:17,0:16:14:121,14,0	1/1:13,0:13:9.64:165,10,0	1/1:16,0:16:2.35:57,2,0	0/1:24,1:25:3.94:310,0,4	0/1:13,0:12:34.08:80,0,34	1/1:20,6:26:56.86:610,57,0	1/1:16,3:18:47.37:441,47,0	1/1:10,0:10:26.94:228,27,0	1/1:30,2:31:77.85:707,78,0	1/1:18,1:18:32.69:306,33,0	1/1:12,0:10:14.91:119,15,0	0/1:13,0:13:3.75:68,0,4	1/1:28,0:28:23.03:177,23,0	1/1:21,0:19:15.23:142,15,0	0/1:22,0:21:28.10:245,0,28	0/1:12,0:12:25.86:127,0,26	0/1:12,0:12:6.81:91,0,7
chr10	24853806	.	TTCTCTCTCTCTCTCTC	T	518.94	PASS	AC=8;AF=0.174;AN=46;BaseQRankSum=0.815;DP=454;FS=11.643;HRun=0;HaplotypeScore=171.9159;InbreedingCoeff=0.6152;MQ=61.39;MQ0=6;MQRankSum=-0.484;QD=6.41;ReadPosRankSum=1.306;VQSLOD=2.1422;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:18.04:0,18,426	0/0:7,0:7:9.03:0,9,512	0/0:14,0:9:1.25:0,1,3	./.	0/0:18,0:18:3.01:0,3,201	0/0:19,0:18:12.04:0,12,527	0/0:10,0:11:12.04:0,12,473	0/0:25,0:25:17.08:0,17,106	0/0:8,0:7:6.02:0,6,299	0/0:16,0:16:24.08:0,24,1083	./.	0/0:18,0:17:15.03:0,15,792	0/0:19,0:19:18.06:0,18,764	0/0:12,0:12:12.02:0,12,455	0/0:28,0:28:27.09:0,27,1668	0/0:13,0:13:6:0,6,211	1/1:18,0:18:9:229,9,0	./.	1/1:16,0:16:2.99:26,3,0	1/1:17,2:22:8.06:267,8,0	1/1:17,8:25:3.48:121,3,0	./.	0/0:11,0:11:6.02:0,6,325	0/0:16,0:19:27.09:0,27,1335	./.	0/0:22,0:22:12.04:0,12,491	0/0:21,0:21:33.11:0,33,1801	0/0:5,0:4:3.01:0,3,119
chr10	24859478	.	A	AACACACACACACACACACACACAC	25859.23	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-4.069;DP=522;FS=14.541;HRun=0;HaplotypeScore=286.9580;InbreedingCoeff=0.5545;MQ=62.85;MQ0=0;MQRankSum=-5.867;QD=56.22;ReadPosRankSum=3.525;VQSLOD=2.2441;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:31:15.05:979,15,0	1/1:7,0:7:3.01:333,3,0	0/0:31,0:26:25.31:0,25,1048	0/0:31,0:27:42:0,42,1341	1/1:21,0:21:12.51:903,13,0	1/1:6,1:14:6.02:663,6,0	1/1:29,0:29:36.08:1649,36,0	1/1:31,0:31:60.18:2117,60,0	1/1:12,1:16:9.03:764,9,0	1/1:18,0:17:24.07:1797,24,0	1/1:9,2:15:2.01:295,2,0	1/1:11,2:23:12.04:1272,12,0	1/1:9,1:21:9.03:879,9,0	1/1:21,0:21:27.08:1953,27,0	1/1:21,0:21:15.03:795,15,0	1/1:16,0:16:24:1427,24,0	1/1:4,2:12:9.03:910,9,0	1/1:11,0:11:16.54:656,17,0	1/1:16,0:15:21.05:966,21,0	1/1:18,0:18:6.02:359,6,0	1/1:12,0:12:8.99:341,9,0	1/1:10,0:10:2.99:24,3,0	1/1:11,0:10:8.99:320,9,0	1/1:13,0:21:4.23:335,4,0	1/1:13,0:13:12.02:653,12,0	1/1:22,0:22:39.13:2673,39,0	1/1:11,0:19:18.06:1699,18,0	1/1:9,0:9:18.04:1097,18,0
chr10	24860563	.	AC	A	1247.47	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.768;DP=688;FS=5.576;HRun=1;HaplotypeScore=63.3242;InbreedingCoeff=0.9825;MQ=86.28;MQ0=0;MQRankSum=-3.481;QD=34.65;ReadPosRankSum=2.519;VQSLOD=3.6095;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:84.29:0,84,1340	0/0:13,0:13:39.11:0,39,597	0/0:28,0:28:81.21:0,81,1216	0/0:22,0:22:66.19:0,66,996	0/0:28,0:28:84.29:0,84,1333	0/0:20,0:20:60.20:0,60,954	0/0:22,0:22:66.21:0,66,1026	0/0:34,0:34:99:0,102,1587	0/0:28,0:28:84.29:0,84,1333	0/0:23,0:23:69.24:0,69,1102	0/0:20,0:20:60.19:0,60,935	0/0:24,0:24:72.21:0,72,1103	0/0:27,0:27:78.24:0,78,1219	0/0:18,0:18:51.16:0,51,791	1/1:0,36:36:96.32:1342,96,0	0/0:33,0:33:99:0,99,1523	0/0:25,0:25:69.21:0,69,1077	0/0:11,0:11:24.08:0,24,383	0/0:23,0:23:69.22:0,69,1054	0/0:32,0:32:96.33:0,96,1532	0/0:21,0:21:63.21:0,63,1003	0/0:31,0:31:93.32:0,93,1484	0/0:32,0:32:96.33:0,96,1534	0/0:14,0:14:42.10:0,42,643	0/0:26,0:26:78.27:0,78,1242	0/0:28,0:28:81.28:0,81,1294	0/0:35,0:35:99:0,105,1622	0/0:5,0:5:15.05:0,15,240
chr10	24861036	.	AATATATATATAT	A	19894.35	PASS	AB=1.000;AC=49;AF=0.942;AN=52;BaseQRankSum=-2.438;DP=381;FS=0.000;HRun=0;HaplotypeScore=150.5753;InbreedingCoeff=0.5063;MQ=62.27;MQ0=1;MQRankSum=-2.438;QD=53.77;ReadPosRankSum=2.011;VQSLOD=4.4254;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,8:16:12.04:382,12,0	1/1:1,0:1:2.98:22,3,0	0/0:8,0:8:5.99:0,6,73	0/1:15,0:7:0:0,0,0	1/1:7,14:22:36.05:1019,36,0	1/1:3,12:15:24.08:858,24,0	1/1:4,2:6:3.01:107,3,0	1/1:14,16:30:48.08:1242,48,0	1/1:2,6:8:15.05:537,15,0	1/1:5,11:16:29.95:813,30,0	1/1:2,17:19:45.11:1323,45,0	1/1:5,6:11:18.06:644,18,0	1/1:4,12:16:24.08:859,24,0	1/1:2,5:7:12.04:429,12,0	1/1:3,15:18:39.13:1326,39,0	1/1:4,10:14:30.10:1073,30,0	1/1:3,10:13:12.04:429,12,0	1/1:2,4:6:12.04:373,12,0	1/1:3,15:18:45.11:1353,45,0	1/1:5,19:24:42.14:1398,42,0	./.	./.	1/1:5,5:10:12.04:429,12,0	1/1:2,3:5:3.01:95,3,0	1/1:9,11:20:27.09:936,27,0	1/1:4,16:20:48.16:1621,48,0	1/1:5,24:29:48.16:1716,48,0	1/1:1,10:11:27.09:911,27,0
chr10	24863031	.	CATAT	C	5114.80	PASS	AB=0.893;AC=43;AF=0.860;AN=50;BaseQRankSum=-3.767;DP=290;FS=5.762;HRun=0;HaplotypeScore=87.1209;InbreedingCoeff=0.1163;MQ=64.21;MQ0=6;MQRankSum=1.079;QD=20.38;ReadPosRankSum=0.769;VQSLOD=4.1435;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	1/1:1,5:6:6.02:103,6,0	./.	0/0:19,0:8:2.63:0,3,38	1/1:4,13:18:9.01:126,9,0	1/1:7,8:15:15.05:257,15,0	1/1:1,5:6:6.02:102,6,0	1/1:17,26:43:53.43:1420,53,0	1/1:0,2:2:6.02:103,6,0	1/1:3,4:7:18.05:253,18,0	1/1:2,9:11:12.04:196,12,0	1/1:2,4:6:6.02:103,6,0	1/1:5,5:9:9.03:146,9,0	1/1:3,2:5:6.02:86,6,0	1/1:3,0:5:5.95:46,6,0	1/1:3,3:6:12.02:169,12,0	0/1:11,0:12:15.97:16,0,51	0/1:6,0:6:8.97:13,0,9	0/1:9,0:9:31.69:32,0,97	0/1:10,0:11:6.70:7,0,9	0/1:3,0:5:0:0,0,0	1/1:1,4:5:6.02:103,6,0	1/1:1,4:5:3.01:46,3,0	./.	1/1:2,6:8:21.04:302,21,0	1/1:0,5:5:15.05:245,15,0	1/1:9,10:17:25.19:424,25,0	1/1:4,21:24:48.16:817,48,0
chr10	24863051	.	C	CAT	4961.64	PASS	AB=1.000;AC=45;AF=0.900;AN=50;BaseQRankSum=-4.943;DP=286;FS=1.353;HRun=0;HaplotypeScore=98.8798;InbreedingCoeff=0.2611;MQ=52.61;MQ0=7;MQRankSum=0.558;QD=18.31;ReadPosRankSum=-2.157;VQSLOD=4.4042;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,0:6:5.36:23,5,0	1/1:2,3:5:6.02:101,6,0	1/1:10,0:1:1.25:3,1,0	0/1:21,0:6:0:0,0,0	1/1:12,3:15:5.94:101,6,0	1/1:6,9:15:32.50:458,32,0	1/1:5,2:7:6.02:102,6,0	1/1:51,0:51:99:811,102,0	1/1:1,2:3:6.02:102,6,0	1/1:4,4:8:15.05:241,15,0	1/1:4,4:8:12.04:188,12,0	1/1:4,2:6:9.03:148,9,0	1/1:1,7:8:12.04:190,12,0	1/1:3,2:5:12.04:162,12,0	1/1:8,0:8:11.55:67,12,0	1/1:2,3:5:9.03:144,9,0	0/1:11,0:11:29.02:75,0,29	./.	0/1:12,0:12:2.30:2,0,102	0/0:7,0:7:1.82:0,2,5	./.	1/1:2,3:5:6.02:89,6,0	1/1:1,2:3:3.01:51,3,0	./.	1/1:1,11:12:27.09:444,27,0	1/1:3,3:6:12.04:200,12,0	1/1:10,9:16:30.08:449,30,0	1/1:5,16:20:48.16:810,48,0
chr10	24863057	.	TATAC	T	1628.12	PASS	AB=1.000;AC=15;AF=0.288;AN=52;BaseQRankSum=-4.611;DP=280;FS=2.139;HRun=0;HaplotypeScore=105.8426;InbreedingCoeff=0.1669;MQ=54.61;MQ0=7;MQRankSum=-6.249;QD=12.24;ReadPosRankSum=-5.522;VQSLOD=1.5796;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:7:8.76:0,9,78	0/0:6,0:6:9.03:0,9,143	1/1:9,0:1:1.25:3,1,0	0/0:18,0:5:2.94:0,3,18	0/0:13,0:13:8.76:0,9,116	0/0:18,0:18:42.12:0,42,626	0/0:6,0:6:5.89:0,6,108	1/1:24,27:51:99:1564,108,0	0/0:2,0:2:6.02:0,6,96	0/0:6,0:6:7.89:0,8,184	0/0:7,0:7:12.90:0,13,148	0/0:5,0:5:9.03:0,9,142	0/1:9,0:8:11.19:11,0,117	0/1:5,0:5:10.82:11,0,142	1/1:8,0:8:10.61:44,11,0	0/0:5,0:5:9.03:0,9,127	0/0:12,0:12:2.65:0,3,46	1/1:1,0:1:2.97:20,3,0	0/1:15,0:14:47.39:47,0,112	0/1:7,0:7:1.57:4,0,2	./.	0/1:3,0:3:17.69:18,0,43	0/0:3,0:3:5.99:0,6,72	./.	0/0:13,0:13:6.41:0,6,348	0/1:7,0:7:10.36:10,0,143	0/1:18,0:15:43.01:43,0,366	0/0:20,0:20:48.16:0,48,750
chr10	24863059	.	TAC	T	1213.60	PASS	AB=1.000;AC=19;AF=0.365;AN=52;BaseQRankSum=-1.406;DP=275;FS=2.935;HRun=0;HaplotypeScore=96.9002;InbreedingCoeff=0.0442;MQ=57.12;MQ0=7;MQRankSum=-7.164;QD=7.27;ReadPosRankSum=-3.718;VQSLOD=2.5840;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:7,0:7:4.43:4,0,11	0/0:6,0:6:8.88:0,9,61	0/0:8,0:1:1.25:0,1,3	0/0:20,0:6:2.96:0,3,19	0/0:13,0:13:8.66:0,9,58	0/0:18,0:18:41.37:0,41,306	0/0:5,0:5:5.88:0,6,59	1/1:49,0:49:99:819,109,0	0/0:3,0:3:5.75:0,6,42	0/1:7,0:7:9.68:10,0,123	0/1:7,0:7:16.87:17,0,50	0/0:4,0:4:8.96:0,9,75	0/1:8,0:7:19.37:19,0,39	0/1:5,0:5:14.93:15,0,65	1/1:2,5:7:12.04:182,12,0	0/0:4,0:4:1.88:0,2,36	0/1:12,0:12:6.79:36,0,7	1/1:2,0:2:5.87:36,6,0	1/1:15,0:14:12.85:158,13,0	0/1:7,0:7:0.98:14,0,1	./.	0/1:3,0:3:14.94:18,0,15	0/0:3,0:3:5.97:0,6,45	./.	0/1:14,0:14:11.17:11,0,188	0/1:7,0:7:9.45:9,0,88	0/1:17,0:14:21.85:22,0,219	0/0:20,0:20:46.88:0,47,296
chr10	24863061	.	CAT	C	668.49	PASS	AB=0.875;AC=11;AF=0.212;AN=52;BaseQRankSum=-1.192;DP=260;FS=0.742;HRun=0;HaplotypeScore=92.1876;InbreedingCoeff=0.6706;MQ=60.75;MQ0=7;MQRankSum=-7.166;QD=7.86;ReadPosRankSum=-2.308;VQSLOD=2.9991;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:6,1:7:0.48:31,0,0	0/0:6,0:6:9.03:0,9,131	0/0:7,0:1:0.89:0,1,2	0/0:21,0:7:3:0,3,31	0/0:11,0:11:9.03:0,9,128	0/0:19,0:19:43.68:0,44,592	0/0:4,0:4:6.02:0,6,96	1/1:42,0:42:57.42:236,57,0	0/0:4,0:4:9.03:0,9,130	0/0:7,0:7:17.99:0,18,242	0/0:7,0:7:14.53:0,15,177	0/0:3,0:3:9.03:0,9,136	0/0:8,0:7:8.52:0,9,101	0/0:4,0:4:9.01:0,9,119	1/1:7,0:7:11.93:90,12,0	0/0:5,0:5:11.78:0,12,146	1/1:11,1:12:12.47:123,12,0	1/1:2,0:2:6.01:65,6,0	1/1:7,8:14:26.86:281,27,0	0/0:3,4:7:2.04:0,2,6	./.	0/0:3,0:3:3.01:0,3,44	0/0:3,0:3:6.02:0,6,89	./.	0/0:13,0:13:25.33:0,25,379	0/0:6,0:6:11.53:0,12,153	0/0:15,0:12:27.09:0,27,412	0/0:17,0:17:48.16:0,48,667
chr10	24863063	.	T	TATAC	595.50	PASS	AB=1.000;AC=9;AF=0.180;AN=50;BaseQRankSum=-3.312;DP=267;FS=6.288;HRun=0;HaplotypeScore=101.2644;InbreedingCoeff=0.6008;MQ=60.90;MQ0=7;MQRankSum=-2.969;QD=12.95;ReadPosRankSum=-0.406;VQSLOD=2.7441;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:7,0:7:3.19:7,0,3	0/0:6,0:6:9.03:0,9,139	1/1:7,0:1:2.50:9,2,0	0/0:21,0:7:2.99:0,3,23	0/0:11,0:11:9.03:0,9,129	0/0:19,0:19:44.77:0,45,571	0/0:4,0:4:6.02:0,6,83	0/0:47,0:47:99:0,119,834	0/0:4,0:4:9.03:0,9,118	0/0:7,0:7:20.78:0,21,252	0/0:7,0:7:17.65:0,18,215	0/0:3,0:3:9.03:0,9,126	0/0:9,0:8:11.70:0,12,120	0/0:4,0:4:11.63:0,12,155	0/0:7,0:7:11.99:0,12,104	0/0:5,0:5:12.04:0,12,166	1/1:4,8:14:4.41:259,4,0	1/1:2,0:2:6.01:65,6,0	1/1:14,1:14:38.54:386,39,0	./.	./.	0/0:3,0:3:2.97:0,3,42	0/0:3,0:3:6.02:0,6,84	./.	0/0:13,0:13:31.87:0,32,374	0/0:7,0:7:17.49:0,17,185	0/0:15,0:12:32.63:0,33,407	0/0:17,0:17:48.16:0,48,644
chr10	24864060	.	TA	T	14369.79	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=7.283;DP=594;FS=1.173;HRun=4;HaplotypeScore=61.4517;InbreedingCoeff=0.9809;MQ=71.57;MQ0=0;MQRankSum=-1.279;QD=32.00;ReadPosRankSum=2.443;VQSLOD=5.4613;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,10:11:27.08:324,27,0	1/1:0,9:9:27.08:324,27,0	0/0:15,0:15:39.10:0,39,511	0/0:5,0:5:6.02:0,6,84	1/1:0,33:33:93.28:1114,93,0	1/1:2,27:29:78.24:935,78,0	1/1:1,12:13:21.06:252,21,0	1/1:5,29:34:87.19:977,87,0	1/1:0,15:15:45.14:540,45,0	1/1:2,27:29:81.25:971,81,0	1/1:1,28:29:72.22:863,72,0	1/1:0,18:18:54.17:648,54,0	1/1:0,32:32:96.29:1151,96,0	1/1:0,17:17:51.16:612,51,0	0/0:22,0:22:57.18:0,57,778	1/1:2,24:26:72.22:864,72,0	0/0:19,0:19:51.14:0,51,694	0/0:13,0:13:36.12:0,36,490	0/0:21,0:21:60.13:0,60,754	0/0:37,0:37:99:0,105,1442	0/0:13,0:13:39.13:0,39,546	1/1:3,18:21:54.06:627,54,0	1/1:0,22:22:60.18:718,60,0	1/1:1,14:15:42.13:504,42,0	1/1:3,22:25:57.17:683,57,0	1/1:2,20:22:60.18:719,60,0	1/1:2,39:41:99:1259,105,0	1/1:0,8:8:24.07:288,24,0
chr10	24865225	.	A	AC	8823.65	PASS	AB=0.750;AC=51;AF=0.911;AN=56;BaseQRankSum=-5.782;DP=368;FS=22.733;HRun=0;HaplotypeScore=84.0452;InbreedingCoeff=0.5383;MQ=65.24;MQ0=0;MQRankSum=-6.570;QD=25.43;ReadPosRankSum=3.685;VQSLOD=3.7385;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:10,0:10:1.71:5,2,0	1/1:0,11:11:33.09:384,33,0	0/1:6,0:9:0.44:0,0,47	0/0:4,0:8:3.32:0,3,30	1/1:0,27:27:45.12:529,45,0	1/1:0,25:25:72.22:868,72,0	1/1:0,7:7:18.03:202,18,0	1/1:17,0:17:0.13:4,0,0	1/1:0,8:8:21.06:253,21,0	1/1:0,18:17:51.13:554,51,0	1/1:0,16:16:39.07:427,39,0	1/1:0,12:12:26.98:293,27,0	1/1:0,17:17:33.10:389,33,0	1/1:0,12:12:36.11:439,36,0	0/0:12,0:13:2.83:0,3,22	1/1:0,15:15:39.12:471,39,0	1/1:0,4:4:3.01:32,3,0	1/1:2,2:4:9:88,9,0	1/1:0,4:4:12.02:120,12,0	1/1:0,22:22:66.19:774,66,0	1/1:0,2:2:3:29,3,0	1/1:3,17:20:54.17:653,54,0	1/1:0,20:20:42.09:485,42,0	1/1:0,7:7:8.99:88,9,0	1/1:0,23:23:66.19:774,66,0	1/1:0,16:16:45.10:468,45,0	1/1:0,11:11:21.06:242,21,0	1/1:0,10:10:21.06:253,21,0
chr10	24865226	.	T	TTTCCAGAGGGTAATTT	30295.68	PASS	AB=0.778;AC=55;AF=0.982;AN=56;BaseQRankSum=0.837;DP=351;FS=12.480;HRun=0;HaplotypeScore=442.3518;InbreedingCoeff=-0.0422;MQ=60.31;MQ0=0;MQRankSum=-2.252;QD=86.31;ReadPosRankSum=1.295;VQSLOD=4.0561;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,0:10:24.08:997,24,0	1/1:11,0:11:27.09:1099,27,0	1/1:3,0:6:5.45:493,5,0	0/1:5,1:7:1.42:837,0,1	1/1:25,0:25:50.92:1405,51,0	1/1:24,0:24:41.83:1706,42,0	1/1:6,0:6:12.04:549,12,0	1/1:17,0:17:48.16:2365,48,0	1/1:8,0:8:7.84:377,8,0	1/1:18,0:17:42.24:1635,42,0	1/1:16,0:16:39.09:1603,39,0	1/1:12,0:12:27.09:1266,27,0	1/1:15,0:15:22.79:896,23,0	1/1:12,0:12:18.06:828,18,0	1/1:13,0:13:33.11:1577,33,0	1/1:15,0:15:27.09:1488,27,0	1/1:4,0:4:3.01:85,3,0	1/1:3,0:3:6.02:166,6,0	1/1:3,0:3:9.03:349,9,0	1/1:22,0:22:42.10:1948,42,0	1/1:2,0:2:3.01:130,3,0	1/1:19,0:19:42.06:1971,42,0	1/1:19,0:19:36.55:1666,37,0	1/1:7,0:7:12.04:493,12,0	1/1:23,0:23:30.10:1562,30,0	1/1:15,0:15:39.61:1954,40,0	1/1:9,0:9:8.06:185,8,0	1/1:10,0:10:12.04:666,12,0
chr10	24865699	.	AT	A	6472.09	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=7.171;DP=485;FS=7.558;HRun=13;HaplotypeScore=86.0813;InbreedingCoeff=0.9314;MQ=64.54;MQ0=0;MQRankSum=0.125;QD=18.44;ReadPosRankSum=4.068;VQSLOD=5.1922;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:38.93:0,39,365	1/1:0,10:10:29.83:219,30,0	0/0:9,0:7:5.68:0,6,58	0/0:18,0:15:23.45:0,23,156	1/1:3,34:37:92.38:678,92,0	1/1:3,19:22:56.60:415,57,0	1/1:2,13:15:38.74:284,39,0	1/1:7,14:23:25.25:295,25,0	1/1:1,16:17:44.69:324,45,0	1/1:3,16:19:47.71:350,48,0	1/1:1,18:19:50.68:371,51,0	1/1:3,17:20:50.65:372,51,0	1/1:2,19:21:56.59:411,57,0	1/1:1,16:17:44.73:328,45,0	0/0:22,0:22:47.85:0,48,415	1/1:0,14:14:41.76:306,42,0	0/0:13,0:13:23.99:0,24,219	0/0:12,1:13:2.01:0,2,150	0/0:15,0:15:23.96:0,24,220	0/0:17,2:20:22.94:0,23,357	0/0:11,0:11:26.99:0,27,248	1/1:1,14:15:35.76:262,36,0	1/1:2,18:20:50.66:371,51,0	1/1:1,11:12:26.82:197,27,0	1/1:5,22:27:62.52:459,63,0	1/1:1,18:19:53.66:393,54,0	1/1:2,20:22:53.57:393,54,0	1/1:0,2:2:5.97:44,6,0
chr10	24867472	.	T	TAA	12774.88	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-11.537;DP=572;FS=5.109;HRun=8;HaplotypeScore=67.0023;InbreedingCoeff=0.9942;MQ=80.24;MQ0=0;MQRankSum=-2.374;QD=32.51;ReadPosRankSum=3.712;VQSLOD=5.0403;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,0:20:40.40:149,40,0	1/1:0,10:10:27.09:429,27,0	0/0:17,0:17:33.04:0,33,354	0/0:12,0:12:23.83:0,24,235	1/1:2,24:27:65.99:857,66,0	1/1:7,17:24:36.12:571,36,0	1/1:2,10:12:27.09:429,27,0	0/0:22,0:22:60.14:0,60,657	1/1:2,10:13:32.60:483,33,0	1/1:6,24:31:75.21:1152,75,0	1/1:3,17:22:56.03:724,56,0	1/1:2,12:14:33.11:524,33,0	1/1:2,22:24:54.18:857,54,0	1/1:1,24:25:66.23:1048,66,0	0/0:20,0:20:57.15:0,57,634	1/1:4,11:17:26.58:390,27,0	0/0:22,0:22:60.15:0,60,669	0/0:14,0:14:33.08:0,33,366	0/0:20,0:20:51.11:0,51,568	0/0:29,0:29:78.17:0,78,859	0/0:23,0:23:60.16:0,60,669	1/1:3,18:22:51.13:782,51,0	1/1:1,24:25:56.76:905,57,0	1/1:2,18:20:45.15:705,45,0	1/1:1,25:26:60.20:952,60,0	1/1:6,15:22:45.14:677,45,0	1/1:1,29:30:60.20:952,60,0	1/1:0,9:9:12.04:190,12,0
chr10	24869435	.	C	CACA	33371.38	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-1.717;DP=526;FS=1.779;HRun=0;HaplotypeScore=111.1751;InbreedingCoeff=0.9971;MQ=72.65;MQ0=2;MQRankSum=-7.938;QD=66.48;ReadPosRankSum=4.493;VQSLOD=5.9687;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,18:19:54.19:1261,54,0	1/1:0,9:9:27.09:642,27,0	0/0:15,0:15:42.14:0,42,715	0/0:7,0:9:24.06:0,24,329	1/1:1,25:26:78.27:1821,78,0	1/1:2,17:18:54.19:1251,54,0	1/1:4,12:16:48.12:1000,48,0	1/1:0,18:21:60.17:1305,60,0	1/1:1,16:17:48.16:1137,48,0	1/1:2,17:19:57.20:1323,57,0	1/1:0,25:25:75.26:1775,75,0	1/1:0,18:18:54.19:1268,54,0	1/1:2,16:17:51.16:1159,51,0	1/1:1,16:17:51.16:1157,51,0	1/1:1,14:14:39.12:876,39,0	1/1:0,12:12:36.12:854,36,0	1/1:3,21:24:69.21:1573,69,0	1/1:0,13:13:36.12:853,36,0	1/1:0,14:15:42.14:978,42,0	1/1:1,25:28:78.27:1821,78,0	1/1:0,18:17:51.18:1209,51,0	1/1:2,19:21:60.19:1358,60,0	1/1:4,16:20:54.14:1170,54,0	1/1:0,13:13:36.12:854,36,0	1/1:4,21:25:75.25:1692,75,0	1/1:1,31:33:99:2258,99,0	1/1:2,30:32:96.31:2209,96,0	1/1:1,8:9:24.08:567,24,0
chr10	24869561	.	G	GA	1651.88	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-3.312;DP=627;FS=27.257;HRun=8;HaplotypeScore=84.2609;InbreedingCoeff=0.9918;MQ=71.74;MQ0=0;MQRankSum=-2.054;QD=25.81;ReadPosRankSum=0.446;VQSLOD=2.0462;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,29:35:73.91:874,74,0	0/0:9,0:9:24.01:0,24,220	0/0:14,0:14:23.94:0,24,217	0/0:6,0:6:18:0,18,162	0/0:26,0:26:66:0,66,599	0/0:22,0:22:60:0,60,540	0/0:23,0:23:60.03:0,60,549	0/0:26,0:26:59.99:0,60,538	0/0:20,0:20:48.01:0,48,435	0/0:28,0:28:75.04:0,75,686	0/0:29,1:30:72.02:0,72,659	0/0:16,0:16:30.01:0,30,275	0/0:26,0:26:66.02:0,66,604	0/0:25,0:25:57.01:0,57,517	1/1:3,26:29:78.23:900,78,0	0/0:15,0:15:42.02:0,42,384	0/0:35,0:35:93.04:0,93,851	0/0:13,0:13:30.01:0,30,274	0/0:16,0:16:30:0,30,272	0/0:26,0:26:69.04:0,69,632	0/0:23,0:23:60.01:0,60,543	0/0:30,0:30:81.04:0,81,741	0/0:28,0:28:69.01:0,69,626	0/0:18,0:18:39.02:0,39,357	0/0:21,0:21:48.01:0,48,439	0/0:22,0:22:51.02:0,51,467	0/0:37,0:37:84.02:0,84,764	0/0:8,0:8:24.01:0,24,220
chr10	24871914	.	T	TG	1862.11	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-1.450;DP=459;FS=11.508;HRun=7;HaplotypeScore=51.7808;InbreedingCoeff=0.9400;MQ=74.14;MQ0=2;MQRankSum=-1.376;QD=16.19;ReadPosRankSum=-1.091;VQSLOD=1.9810;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,28:34:37.22:721,37,0	0/0:2,0:2:6.01:0,6,58	0/0:25,0:20:38.97:0,39,362	0/0:30,0:24:21.58:0,22,298	0/0:16,0:16:42.07:0,42,404	0/0:24,0:24:66.10:0,66,636	0/0:16,0:16:45.02:0,45,425	1/1:4,14:18:42.10:493,42,0	0/0:22,0:22:60.09:0,60,579	0/0:21,0:21:54.09:0,54,521	0/0:7,0:7:21.03:0,21,203	0/0:20,0:20:48.07:0,48,463	0/0:15,0:15:42.07:0,42,405	0/0:18,0:18:48.05:0,48,456	1/1:4,11:15:36.08:412,36,0	0/0:27,0:27:66.06:0,66,624	1/1:1,0:8:17.25:88,17,0	1/1:0,0:5:14.38:74,14,0	1/1:4,1:9:17.45:102,17,0	1/1:2,1:8:11.50:59,12,0	1/1:5,1:18:22.67:116,23,0	0/0:14,0:14:33.03:0,33,311	0/0:12,0:12:27.01:0,27,249	0/0:10,0:10:27.04:0,27,261	0/0:22,0:22:57.08:0,57,550	0/0:17,0:17:45.07:0,45,434	0/0:24,0:24:54.07:0,54,515	0/0:2,0:2:3:0,3,29
chr10	24872033	.	G	GA	22174.21	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-7.906;DP=633;FS=9.737;HRun=2;HaplotypeScore=61.9682;InbreedingCoeff=0.9975;MQ=68.46;MQ0=0;MQRankSum=-3.978;QD=38.03;ReadPosRankSum=7.443;VQSLOD=4.0675;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,39:40:99:1467,102,0	1/1:1,8:9:21.07:301,21,0	0/0:30,0:29:80.95:0,81,918	0/0:20,0:20:35.80:0,36,538	1/1:0,21:21:60.20:864,60,0	1/1:0,25:25:72.24:1034,72,0	1/1:0,18:18:48.16:691,48,0	1/1:2,28:30:84.26:1171,84,0	1/1:0,23:23:66.22:950,66,0	1/1:1,20:21:60.20:862,60,0	1/1:2,16:18:33.11:475,33,0	1/1:3,20:23:54.18:777,54,0	1/1:0,26:26:78.26:1122,78,0	1/1:2,30:32:81.27:1166,81,0	1/1:0,31:31:87.29:1251,87,0	1/1:1,31:32:87.29:1252,87,0	1/1:1,21:22:54.01:748,54,0	1/1:0,15:15:36.12:514,36,0	1/1:0,12:12:36.11:498,36,0	1/1:0,25:25:75.22:1053,75,0	1/1:4,17:21:42.14:605,42,0	1/1:0,21:21:57.19:820,57,0	1/1:1,18:19:51.17:734,51,0	1/1:1,24:25:69.23:993,69,0	1/1:0,19:19:48.16:691,48,0	1/1:1,16:17:48.14:670,48,0	1/1:1,23:25:66.22:948,66,0	1/1:0,13:13:36.12:518,36,0
chr10	24873029	.	A	AATAT	3078.04	PASS	AC=14;AF=0.269;AN=52;BaseQRankSum=-0.865;DP=256;FS=0.552;HRun=0;HaplotypeScore=45.5421;InbreedingCoeff=0.7817;MQ=89.38;MQ0=1;MQRankSum=0.057;QD=31.73;ReadPosRankSum=-0.155;VQSLOD=3.0901;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,5:6:9.03:230,9,0	0/0:1,0:1:3.01:0,3,45	0/0:9,0:5:9.01:0,9,102	0/0:22,0:16:5.69:0,6,103	0/0:17,0:17:39.10:0,39,652	0/0:11,0:11:30.09:0,30,492	./.	1/1:9,0:41:90.12:443,90,0	0/0:7,0:7:21.07:0,21,368	0/0:9,0:9:27.09:0,27,472	0/0:4,0:4:9.03:0,9,158	0/0:6,0:6:12.03:0,12,183	0/0:5,0:5:15.03:0,15,234	0/0:2,0:2:6.02:0,6,105	1/1:2,2:5:11.83:242,12,0	0/0:5,0:5:15.05:0,15,258	1/1:1,17:18:42.14:1072,42,0	1/1:1,10:11:24.08:613,24,0	1/1:4,8:14:29.64:580,30,0	./.	1/1:0,2:2:3.01:77,3,0	0/0:3,0:3:6.02:0,6,105	0/0:6,0:6:18.03:0,18,258	0/0:2,0:2:3.01:0,3,53	0/0:2,0:2:6.01:0,6,73	0/0:20,0:20:54.18:0,54,917	0/0:12,0:12:33.10:0,33,546	0/0:13,0:13:36.06:0,36,529
chr10	24873348	.	A	ATGTGTGTG	13555.58	PASS	AC=50;AF=0.926;AN=54;BaseQRankSum=-2.727;DP=573;FS=1.343;HRun=0;HaplotypeScore=156.0468;InbreedingCoeff=0.6043;MQ=57.07;MQ0=15;MQRankSum=2.510;QD=28.36;ReadPosRankSum=2.398;VQSLOD=4.1407;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:36:18.89:284,19,0	1/1:3,3:6:8.99:268,9,0	0/0:47,0:17:12.03:0,12,154	0/0:36,0:15:11.24:0,11,166	1/1:12,7:22:14.92:419,15,0	1/1:15,14:34:27.09:890,27,0	1/1:13,6:22:15.03:539,15,0	1/1:25,0:22:24.07:398,24,0	1/1:8,13:23:4.94:939,5,0	1/1:7,8:14:39.08:833,39,0	1/1:3,6:12:18.06:529,18,0	1/1:2,10:14:12.04:475,12,0	1/1:7,6:17:15.05:540,15,0	1/1:5,16:22:18.06:731,18,0	1/1:10,0:19:3.01:104,3,0	1/1:9,5:16:21.07:748,21,0	1/1:13,0:13:9.43:141,9,0	1/1:7,0:7:14.21:309,14,0	1/1:24,0:24:42.03:750,42,0	1/1:11,0:10:3.01:48,3,0	./.	1/1:7,2:9:3.01:124,3,0	1/1:7,6:15:11.63:495,12,0	1/1:9,9:19:14.99:359,15,0	1/1:11,14:30:36.12:1388,36,0	1/1:14,7:24:38.33:835,38,0	1/1:14,15:33:30.10:1180,30,0	1/1:4,4:9:8.77:229,9,0
chr10	24874769	.	GTA	G	2768.57	PASS	AC=32;AF=0.615;AN=52;BaseQRankSum=-8.948;DP=241;FS=0.000;HRun=0;HaplotypeScore=42.1115;InbreedingCoeff=0.7666;MQ=71.34;MQ0=3;MQRankSum=1.983;QD=22.15;ReadPosRankSum=1.891;VQSLOD=3.5355;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:3,0:6:5.99:0,6,48	1/1:0,1:1:3.01:38,3,0	0/0:6,0:5:2.59:0,3,10	0/0:14,0:9:5.64:0,6,27	1/1:3,10:13:26.57:314,27,0	1/1:1,14:15:42.13:535,42,0	./.	0/0:35,0:35:66.37:0,66,1333	1/1:0,8:8:15.05:191,15,0	1/1:1,6:7:18.05:216,18,0	1/1:1,4:5:6.02:76,6,0	./.	1/1:1,10:11:24.08:305,24,0	1/1:2,8:10:15.05:191,15,0	0/0:1,0:2:6:0,6,53	1/1:1,6:7:9.03:115,9,0	0/0:2,0:8:17.61:0,18,159	0/0:2,0:15:31.26:0,31,269	0/0:5,0:10:19.52:0,20,156	0/0:2,0:4:8.99:0,9,76	0/0:2,0:9:17.99:0,18,155	1/1:1,1:2:3.01:38,3,0	1/1:3,3:6:9.03:115,9,0	1/1:1,1:2:3.01:38,3,0	1/1:1,6:7:12.04:153,12,0	1/1:2,11:13:30.08:366,30,0	1/1:1,9:10:15.05:191,15,0	1/1:0,8:8:6.02:76,6,0
chr10	24875790	.	A	AGT	2196.98	PASS	AB=0.921;AC=13;AF=0.232;AN=56;BaseQRankSum=-0.651;DP=761;FS=9.971;HRun=0;HaplotypeScore=221.8238;InbreedingCoeff=0.4659;MQ=48.11;MQ0=33;MQRankSum=-2.592;QD=9.94;ReadPosRankSum=-0.107;VQSLOD=2.0148;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:24:7.36:0,7,89	0/0:8,0:8:8.85:0,9,109	0/0:62,0:16:4.13:0,4,40	0/0:56,0:18:5.95:0,6,84	0/1:29,0:31:15.85:16,0,280	0/0:22,0:25:11.18:0,11,214	0/0:16,0:17:22.59:0,23,292	0/0:33,0:34:35.10:0,35,496	0/0:29,0:29:47.75:0,48,499	0/0:28,0:29:48.72:0,49,553	0/1:19,0:21:4.51:5,0,102	0/0:26,0:28:15.12:0,15,278	0/0:22,0:22:28.04:0,28,269	0/0:20,0:20:11.08:0,11,275	0/0:11,0:35:16.25:0,16,78	0/0:23,0:23:16.40:0,16,329	1/1:15,19:34:14.92:692,15,0	1/1:4,8:12:23.67:340,24,0	1/1:14,9:22:23.49:316,23,0	1/1:10,16:27:26.31:674,26,0	0/1:9,17:25:45.63:311,0,46	0/1:25,0:26:7.69:8,0,159	0/0:31,0:33:29.62:0,30,457	0/0:19,0:21:15.38:0,15,306	0/0:30,0:32:13.79:0,14,278	0/0:29,0:29:55.40:0,55,718	0/1:21,0:21:4.91:5,0,266	0/0:9,0:9:18.06:0,18,218
chr10	24875824	.	T	TGTGTGTGA	9965.19	PASS	AB=0.863;AC=46;AF=0.821;AN=56;BaseQRankSum=-2.142;DP=581;FS=19.653;HRun=0;HaplotypeScore=266.4743;InbreedingCoeff=0.3829;MQ=34.09;MQ0=30;MQRankSum=-1.885;QD=21.16;ReadPosRankSum=1.471;VQSLOD=2.5279;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:12,0:18:5.63:76,6,0	1/1:1,9:10:9.50:307,10,0	0/0:50,0:5:6.02:0,6,157	0/0:46,0:8:3.01:0,3,171	1/1:17,10:28:17.73:569,18,0	1/1:8,9:18:10.47:304,10,0	1/1:14,2:16:10.96:230,11,0	0/1:27,0:26:22.53:23,0,566	1/1:20,5:25:26.20:493,26,0	1/1:18,4:22:32.92:1074,33,0	0/0:4,8:14:0:0,0,0	1/1:8,17:26:12.09:443,12,0	1/1:11,3:14:14.92:395,15,0	1/1:14,4:18:6.81:108,7,0	1/1:18,0:27:2.03:70,2,0	0/1:17,9:26:2.22:446,0,2	1/1:15,4:19:20.83:558,21,0	1/1:8,1:9:9.41:414,9,0	1/1:11,1:12:6.46:343,6,0	1/1:14,5:19:20.27:491,20,0	1/1:19,2:18:10.59:219,11,0	1/1:6,13:19:8.18:302,8,0	1/1:16,9:25:17.47:359,17,0	0/1:12,2:14:0.27:0,0,0	1/1:2,10:13:8.69:379,9,0	1/1:12,12:24:57.19:1883,57,0	1/1:9,7:16:10.12:479,10,0	0/1:4,1:5:0:0,0,0
chr10	24875837	.	GTA	G	354.33	PASS	AB=0.976;AC=16;AF=0.286;AN=56;BaseQRankSum=-2.416;DP=479;FS=58.191;HRun=0;HaplotypeScore=170.9165;InbreedingCoeff=-0.2997;MQ=31.74;MQ0=11;MQRankSum=5.248;QD=1.30;ReadPosRankSum=-1.240;VQSLOD=0.6211;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:9.37:0,9,86	0/0:7,0:7:8.92:0,9,104	0/0:23,0:3:6.02:0,6,116	0/0:25,0:6:7.99:0,8,110	0/1:28,0:28:5.74:6,0,35	0/0:16,0:16:23.01:0,23,143	1/1:14,1:15:0.32:71,0,0	0/0:27,0:26:70.88:0,71,1004	0/1:21,1:22:57.67:70,0,58	0/1:19,1:20:83.31:83,0,385	0/0:14,0:14:2.51:0,3,6	0/1:24,0:24:21.96:22,0,50	0/1:13,0:13:5.48:5,0,144	0/0:16,0:16:11.04:0,11,117	0/0:26,0:26:5.56:0,6,46	0/1:26,0:26:24.41:24,0,179	0/1:10,2:12:61.16:61,0,92	0/1:9,0:9:9.39:9,0,147	0/1:13,0:13:8.02:8,0,399	0/1:15,0:15:37.70:42,0,38	0/1:15,1:15:12.83:32,0,13	0/1:14,0:15:7.90:8,0,27	0/1:21,0:21:35.36:35,0,79	0/0:8,1:9:1.71:0,2,5	0/0:10,0:10:9.56:0,10,37	0/1:23,1:24:19.60:20,0,566	0/0:12,0:12:6.93:0,7,119	0/0:5,0:5:2.22:0,2,7
chr10	24878608	.	A	AGAG	3080	PASS	AB=0.989;AC=34;AF=0.607;AN=56;BaseQRankSum=-1.988;DP=597;FS=10.041;HRun=0;HaplotypeScore=154.1049;InbreedingCoeff=0.1212;MQ=57.78;MQ0=12;MQRankSum=0.448;QD=6.71;ReadPosRankSum=-1.040;VQSLOD=2.0723;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:20:10.61:154,11,0	1/1:11,0:11:0.62:113,1,0	0/1:35,0:11:1.56:2,0,146	0/0:40,0:18:12.21:0,12,163	1/1:26,0:26:4.29:123,4,0	0/1:25,0:25:4.64:55,0,5	1/1:12,0:12:27.01:335,27,0	0/0:24,0:24:51.12:0,51,717	0/1:19,1:20:0.58:48,0,1	1/1:28,0:28:35.72:830,36,0	0/1:22,0:22:13.81:143,0,14	0/0:10,0:10:4.35:0,4,12	1/1:25,0:25:13.78:157,14,0	1/1:26,1:27:8.28:127,8,0	1/1:20,0:20:6.61:123,7,0	0/1:24,0:24:1.63:14,0,2	0/1:20,0:20:42.66:43,0,103	0/0:16,0:16:1.16:0,1,166	0/1:16,0:16:81.68:104,0,82	0/0:11,0:11:17.69:0,18,120	0/0:37,0:37:1.05:0,1,364	1/1:8,0:8:2.98:64,3,0	0/1:22,0:22:18.23:188,0,18	1/1:17,1:18:4.68:86,5,0	0/1:24,0:24:7.75:56,0,8	1/1:22,0:22:3.50:293,3,0	0/1:25,1:26:27.15:87,0,27	1/1:6,0:6:4.73:99,5,0
chr10	24878620	.	AGAAGAGGAGGAGAAG	A	12286.05	PASS	AB=1.000;AC=39;AF=0.696;AN=56;BaseQRankSum=10.300;DP=567;FS=7.677;HRun=0;HaplotypeScore=190.1843;InbreedingCoeff=0.8128;MQ=49.05;MQ0=14;MQRankSum=-6.094;QD=31.83;ReadPosRankSum=3.948;VQSLOD=3.0875;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:4,13:17:4.45:327,4,0	1/1:2,8:10:11.96:453,12,0	0/0:32,0:7:12.52:0,13,380	0/0:30,0:9:12.52:0,13,316	1/1:1,22:23:14.95:288,15,0	1/1:0,21:21:12.04:530,12,0	0/1:13,0:13:3.78:474,0,4	0/0:19,0:19:48.15:0,48,1292	1/1:1,21:22:15.05:573,15,0	1/1:0,31:31:75.46:1424,75,0	1/1:1,22:23:20.96:617,21,0	1/1:1,10:10:9.03:404,9,0	1/1:1,23:24:8.55:394,9,0	1/1:2,24:26:21.07:843,21,0	1/1:1,17:18:12.04:524,12,0	1/1:0,21:21:9.03:403,9,0	0/0:21,0:20:28.72:0,29,966	0/0:16,0:16:9.10:0,9,1488	0/0:16,0:14:41.50:0,42,896	0/0:10,0:10:30.09:0,30,816	0/0:37,0:37:99:0,104,2815	1/1:0,10:10:17.93:520,18,0	1/1:1,20:21:27.09:955,27,0	1/1:2,16:18:6.02:213,6,0	1/1:0,22:22:18.06:792,18,0	1/1:3,21:23:47.31:1467,47,0	1/1:2,25:27:7.72:695,8,0	1/1:0,4:4:9.03:392,9,0
chr10	24879143	.	GC	G	231.32	PASS	AC=4;AF=0.083;AN=48;BaseQRankSum=0.698;DP=146;FS=15.442;HRun=5;HaplotypeScore=29.8960;InbreedingCoeff=0.4131;MQ=39.14;MQ0=9;MQRankSum=1.222;QD=16.52;ReadPosRankSum=1.885;VQSLOD=1.7611;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,9:7:18.05:204,18,0	0/0:1,0:1:3.01:0,3,41	./.	0/0:11,0:1:3.01:0,3,41	0/0:6,0:6:18.06:0,18,246	0/0:5,0:4:9.03:0,9,123	0/0:12,0:11:24.07:0,24,315	0/0:9,0:4:12.04:0,12,164	0/0:3,0:3:9.03:0,9,115	0/0:8,0:8:24.08:0,24,328	0/0:5,0:5:12.04:0,12,164	./.	0/0:2,0:2:6.02:0,6,82	0/0:5,0:4:12.04:0,12,164	1/1:0,4:4:12.03:136,12,0	0/0:4,0:4:5.71:0,6,77	0/0:3,0:3:6.02:0,6,82	./.	0/0:5,0:1:3.01:0,3,41	0/0:4,0:3:6.02:0,6,82	0/0:3,0:3:2.97:0,3,20	0/0:8,0:8:24.07:0,24,304	0/0:8,0:8:24.07:0,24,305	0/0:4,0:4:3.01:0,3,41	./.	0/0:5,0:4:9.03:0,9,123	0/0:4,0:3:2.87:0,3,41	0/0:2,0:2:3.01:0,3,36
chr10	24880126	.	GAAGAA	G	61.79	PASS	AC=2;AF=0.053;AN=38;BaseQRankSum=0.511;DP=748;FS=0.000;HRun=0;HaplotypeScore=30.3910;InbreedingCoeff=0.3505;MQ=9.50;MQ0=608;MQRankSum=-2.415;QD=2.94;ReadPosRankSum=0.123;VQSLOD=0.9615;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:2:3.01:0,3,54	0/0:28,0:3:9.03:0,9,299	./.	./.	0/0:64,0:4:9.03:0,9,298	0/0:21,0:3:9.03:0,9,299	0/0:15,0:1:3.01:0,3,100	./.	0/0:19,0:3:9.03:0,9,255	0/0:26,0:9:27.09:0,27,894	0/0:51,0:6:18.06:0,18,554	0/0:14,0:2:6.02:0,6,199	0/0:13,0:5:15.05:0,15,455	0/0:15,0:3:9.02:0,9,224	./.	0/0:17,0:8:24.08:0,24,753	./.	./.	1/1:16,5:2:6.02:140,6,0	./.	./.	0/0:54,0:4:12.04:0,12,371	0/0:64,0:4:12.04:0,12,275	0/0:35,0:2:6.02:0,6,199	0/0:53,0:3:9.03:0,9,214	0/0:14,0:3:9.03:0,9,299	0/0:14,0:5:15.05:0,15,498	./.
chr10	24881797	.	TA	T	5310.18	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=10.332;DP=342;FS=3.696;HRun=8;HaplotypeScore=32.4652;InbreedingCoeff=0.8917;MQ=57.20;MQ0=12;MQRankSum=1.485;QD=21.67;ReadPosRankSum=3.078;VQSLOD=4.4169;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,13:17:33.04:319,33,0	1/1:0,3:3:6.01:58,6,0	1/1:6,0:5:2.67:11,3,0	0/0:6,0:2:3.01:0,3,32	1/1:2,17:18:48.07:463,48,0	1/1:2,12:13:36.06:348,36,0	1/1:0,8:8:24.04:232,24,0	0/0:23,0:21:57.14:0,57,657	1/1:1,10:11:21.03:203,21,0	1/1:2,14:15:39.06:377,39,0	1/1:1,9:10:27.04:261,27,0	1/1:1,7:8:15.02:145,15,0	1/1:3,10:12:30.05:290,30,0	1/1:3,14:15:33.05:319,33,0	1/1:0,10:10:24.04:231,24,0	1/1:1,9:10:24.04:232,24,0	0/0:14,0:14:36.09:0,36,422	0/0:16,0:16:45.14:0,45,542	0/0:19,0:16:48.11:0,48,562	0/0:12,0:12:36.11:0,36,435	0/0:7,0:7:12.04:0,12,145	1/1:1,12:13:36.06:347,36,0	1/1:3,11:13:24.04:232,24,0	1/1:2,3:4:9.01:87,9,0	1/1:4,19:22:51.08:493,51,0	1/1:1,7:8:21.03:203,21,0	1/1:0,13:13:36.06:347,36,0	1/1:3,4:7:12.01:116,12,0
chr10	24882756	.	T	TA	1240.89	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-2.450;DP=377;FS=2.184;HRun=8;HaplotypeScore=85.4954;InbreedingCoeff=0.8722;MQ=82.34;MQ0=3;MQRankSum=-4.981;QD=23.41;ReadPosRankSum=0.031;VQSLOD=4.0009;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:18:44.96:0,45,412	0/0:5,0:5:5.86:0,6,55	0/0:25,0:22:53.02:0,53,460	0/0:22,0:19:0.79:0,1,240	0/0:9,0:9:27:0,27,243	0/0:15,0:15:14.97:0,15,137	0/0:18,0:18:44.99:0,45,406	0/0:23,0:23:57.03:0,57,521	0/0:14,0:14:30.01:0,30,274	0/0:17,0:18:44.06:0,44,396	0/0:18,0:18:51.03:0,51,467	0/0:10,0:10:24.01:0,24,220	0/0:11,0:11:27.01:0,27,244	0/0:11,0:11:30.01:0,30,274	0/0:12,0:12:26.99:0,27,242	0/0:14,0:14:36.01:0,36,329	1/1:3,12:15:33.10:381,33,0	1/1:2,7:9:21.06:242,21,0	1/1:1,3:4:9.03:104,9,0	1/1:1,12:13:36.09:406,36,0	1/1:1,11:12:24.07:277,24,0	0/0:5,0:5:12.01:0,12,110	0/0:14,0:14:38.99:0,39,347	0/0:16,0:16:36.01:0,36,329	0/0:6,0:6:14.99:0,15,137	0/0:19,0:19:42.01:0,42,384	0/0:13,0:13:39.02:0,39,357	0/0:5,0:5:5.99:0,6,55
chr10	24882791	.	C	CAG	4179.21	PASS	AB=0.763;AC=29;AF=0.518;AN=56;BaseQRankSum=-4.142;DP=354;FS=29.482;HRun=0;HaplotypeScore=91.8234;InbreedingCoeff=0.4964;MQ=51.13;MQ0=21;MQRankSum=4.289;QD=20.49;ReadPosRankSum=1.437;VQSLOD=1.4325;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:22:47.28:0,47,338	0/1:3,5:8:44.01:44,0,65	0/0:18,0:4:6.02:0,6,92	0/0:15,0:4:8.88:0,9,98	0/1:13,0:12:14.07:206,0,14	0/1:2,11:12:11.64:53,0,12	1/1:19,0:18:30.31:392,30,0	0/0:27,0:26:50.13:0,50,410	1/1:9,0:8:18.50:241,19,0	0/1:3,11:14:1.55:224,0,2	1/1:16,0:16:38.98:505,39,0	0/1:10,0:10:14.18:162,0,14	1/1:6,0:6:17.05:145,17,0	1/1:11,1:12:21.99:255,22,0	0/0:11,0:10:21.89:0,22,176	1/1:8,1:8:5.55:200,6,0	0/0:14,0:14:8.10:0,8,130	0/0:9,0:9:21.25:0,21,143	0/0:8,0:7:16.95:0,17,99	0/0:8,0:8:14.87:0,15,110	0/0:16,0:15:20.08:0,20,186	1/1:7,1:6:15.78:209,16,0	1/1:10,0:10:24.02:317,24,0	1/1:15,3:18:23.20:388,23,0	0/1:7,0:6:1.28:106,0,1	0/1:7,11:15:7.15:384,0,7	1/1:12,0:12:26.93:313,27,0	1/1:2,0:1:3.01:37,3,0
chr10	24882926	.	ATCTC	A	770.78	PASS	AB=1.000;AC=15;AF=0.341;AN=44;BaseQRankSum=-0.312;DP=191;FS=6.065;HRun=0;HaplotypeScore=52.9556;InbreedingCoeff=0.4712;MQ=97.95;MQ0=7;MQRankSum=-0.521;QD=16.06;ReadPosRankSum=1.467;VQSLOD=2.2237;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:12.01:0,12,146	./.	0/0:22,0:14:0:0,0,0	0/0:31,0:21:10.31:0,10,58	./.	0/0:5,0:5:3.01:0,3,49	0/0:7,0:6:12.01:0,12,160	1/1:7,4:9:12.04:185,12,0	./.	0/0:6,0:6:3.01:0,3,43	0/0:10,0:10:3.01:0,3,50	0/0:4,0:4:12.02:0,12,174	0/0:5,0:4:2.99:0,3,23	./.	1/1:2,0:2:3.01:46,3,0	./.	1/1:4,0:3:3.01:37,3,0	0/1:6,0:5:25.58:74,0,26	1/1:3,0:4:6.02:74,6,0	1/1:4,0:4:6.02:92,6,0	0/0:5,0:5:0.47:0,0,1	0/0:3,0:3:3.01:0,3,38	0/0:5,0:5:6.02:0,6,100	0/0:8,0:8:3.01:0,3,50	0/0:8,0:8:5.99:0,6,101	1/1:7,0:7:6.02:94,6,0	./.	1/1:10,0:9:27.02:310,27,0
chr10	24882956	.	CTATATATATATATATATATA	C	67.23	PASS	AC=4;AF=0.40;AN=10;BaseQRankSum=1.231;DP=97;FS=0.000;HRun=0;HaplotypeScore=45.8861;MQ=71.47;MQ0=6;MQRankSum=-1.231;QD=6.72;ReadPosRankSum=0.358;VQSLOD=0.8298;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	./.	./.	./.	0/0:9,0:6:2.37:0,2,8	./.	./.	./.	./.	./.	./.	./.	./.	0/0:8,0:7:3.01:0,3,31	0/0:5,0:3:3.01:0,3,73	1/1:2,0:3:2.04:6,2,0	./.	./.	./.	./.	./.	./.	./.	./.	1/1:7,0:7:2.65:131,3,0
chr10	24883404	.	TCAACAACAATAACAACAACAA	T	930.28	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=-0.762;DP=488;FS=0.000;HRun=0;HaplotypeScore=254.3087;InbreedingCoeff=0.5850;MQ=57.61;MQ0=6;MQRankSum=2.299;QD=16.61;ReadPosRankSum=-0.439;VQSLOD=2.0015;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:1,17:18:6.02:333,6,0	0/0:7,0:7:15.05:0,15,708	0/0:27,0:13:29.21:0,29,795	0/0:29,0:13:23.08:0,23,1220	0/0:23,0:23:19.07:0,19,1622	0/0:20,0:20:27.09:0,27,1240	0/0:17,0:17:9.03:0,9,421	0/1:19,0:19:48.78:49,0,1513	0/0:16,0:16:21.07:0,21,986	0/0:13,0:12:19.12:0,19,1158	0/0:21,0:21:14.86:0,15,1269	0/0:11,0:11:15.05:0,15,738	0/0:19,0:19:21.07:0,21,1031	0/0:19,0:19:24.08:0,24,1092	1/1:4,14:19:12.04:664,12,0	0/0:14,0:14:24.08:0,24,1150	0/0:24,0:24:51.03:0,51,3092	0/0:9,0:9:2.07:0,2,1469	0/0:18,0:18:39.10:0,39,2481	0/0:17,0:17:42.12:0,42,2924	0/0:14,0:14:27.07:0,27,1813	0/0:17,0:18:16.10:0,16,1913	0/0:16,0:16:21.44:0,21,595	0/0:14,0:14:9.03:0,9,344	0/0:11,0:11:18.06:0,18,851	0/0:19,0:19:25.16:0,25,1900	0/0:25,0:24:36.59:0,37,1690	0/0:11,0:11:18.06:0,18,884
chr10	24883408	.	CAACAAT	C	9590.09	PASS	AB=0.783;AC=42;AF=0.750;AN=56;BaseQRankSum=0.319;DP=473;FS=2.980;HRun=0;HaplotypeScore=110.0813;InbreedingCoeff=0.7307;MQ=55.36;MQ0=6;MQRankSum=-3.801;QD=26.94;ReadPosRankSum=1.432;VQSLOD=4.6621;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:18:6.02:81,6,0	1/1:1,5:6:15.05:342,15,0	0/0:27,0:12:29.08:0,29,350	0/0:29,0:13:26.07:0,26,409	1/1:0,23:23:56.42:654,56,0	1/1:2,17:19:27.09:613,27,0	1/1:4,13:17:9.03:192,9,0	1/1:18,0:18:29.97:303,30,0	1/1:2,12:14:21.07:465,21,0	1/1:1,12:12:32.92:578,33,0	1/1:0,21:21:44.53:588,45,0	1/1:2,9:11:15.05:340,15,0	1/1:1,16:17:21.07:478,21,0	1/1:1,17:18:23.88:532,24,0	1/1:18,0:18:12.04:180,12,0	1/1:0,14:14:24.08:547,24,0	0/0:24,0:24:9.61:0,10,830	0/0:9,0:9:2.02:0,2,416	0/1:16,0:16:10.61:11,0,630	0/0:15,0:15:20.77:0,21,923	0/0:13,0:13:27.02:0,27,514	1/1:1,17:18:47.94:901,48,0	1/1:1,13:14:17.85:316,18,0	0/1:3,10:13:9.70:76,0,10	1/1:1,12:13:18.06:394,18,0	1/1:0,20:20:56.73:852,57,0	1/1:1,23:24:33.03:737,33,0	1/1:3,8:11:18.06:411,18,0
chr10	24883411	.	CAAT	C	4664.31	PASS	AB=1.000;AC=43;AF=0.768;AN=56;BaseQRankSum=8.337;DP=465;FS=2.313;HRun=0;HaplotypeScore=104.2500;InbreedingCoeff=0.7404;MQ=55.18;MQ0=6;MQRankSum=-4.714;QD=13.56;ReadPosRankSum=1.031;VQSLOD=4.1962;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:19:5.95:43,6,0	1/1:6,0:6:15.02:141,15,0	0/0:27,0:12:29.08:0,29,307	0/0:31,0:14:22.37:0,22,345	1/1:23,0:23:52.26:346,52,0	1/1:18,0:18:27.03:256,27,0	1/1:15,0:15:8.98:76,9,0	1/1:0,19:19:56.91:534,57,0	1/1:12,0:12:20.97:187,21,0	1/1:13,0:12:32.84:281,33,0	1/1:21,0:21:38.01:280,38,0	1/1:10,0:10:15.01:138,15,0	1/1:16,0:16:21.02:196,21,0	1/1:18,0:18:23.85:218,24,0	1/1:17,0:17:11.97:96,12,0	1/1:14,0:14:24.03:225,24,0	0/0:25,0:25:4.96:0,5,469	0/0:10,0:10:2.02:0,2,230	0/1:16,0:16:7.90:8,0,394	0/0:15,0:15:1.95:0,2,494	0/0:13,0:13:27.02:0,27,327	1/1:18,0:18:43.31:388,43,0	1/1:13,0:13:15.27:124,15,0	1/1:12,0:12:7.46:48,7,0	1/1:12,0:12:17.96:158,18,0	1/1:20,0:20:55.22:452,55,0	1/1:24,0:23:32.92:299,33,0	1/1:8,0:8:18.02:170,18,0
chr10	24883414	.	T	TAAC	2703.71	PASS	AB=1.000;AC=24;AF=0.429;AN=56;BaseQRankSum=-10.830;DP=467;FS=13.817;HRun=0;HaplotypeScore=111.2450;InbreedingCoeff=-0.0194;MQ=54.87;MQ0=6;MQRankSum=7.260;QD=8.92;ReadPosRankSum=-6.401;VQSLOD=-0.7324;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:4.62:0,5,20	0/0:5,0:5:14.80:0,15,97	0/0:27,0:12:2.98:0,3,21	0/0:31,0:14:2.17:0,2,54	0/1:24,0:24:32.73:81,0,33	0/0:17,0:17:11.83:0,12,127	0/1:13,0:13:9.31:26,0,9	0/1:19,0:19:8.29:18,0,8	0/1:12,0:12:12.64:13,0,77	0/1:13,0:12:35.68:59,0,36	0/1:21,0:21:25.58:26,0,73	0/1:9,0:9:15.03:15,0,44	0/0:16,0:16:6.41:0,6,103	0/1:17,0:17:11.12:11,0,81	0/0:15,0:15:11.90:0,12,84	0/0:14,0:14:23.70:0,24,155	1/1:5,23:28:39.05:717,39,0	1/1:3,8:11:15.05:293,15,0	1/1:4,10:14:30.10:528,30,0	1/1:2,13:16:39.08:670,39,0	1/1:4,8:13:15.05:294,15,0	0/0:19,0:20:3.72:0,4,150	0/1:14,0:14:2.29:2,0,49	0/1:11,0:11:10.46:10,0,14	0/1:13,0:13:0.99:1,0,80	0/1:22,0:22:77.24:77,0,99	0/1:25,0:24:28.56:29,0,92	0/1:8,0:8:4.03:4,0,49
chr10	24884190	.	CTTTTTTGTGT	C	2555.86	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=0.331;DP=481;FS=0.000;HRun=0;HaplotypeScore=189.2871;InbreedingCoeff=0.9933;MQ=76.29;MQ0=0;MQRankSum=-8.228;QD=63.90;ReadPosRankSum=0.094;VQSLOD=3.3956;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,15:22:39.13:1169,39,0	0/0:10,0:10:27.09:0,27,1085	0/0:17,0:17:47.18:0,47,1920	0/0:12,0:12:30.10:0,30,1018	0/0:17,0:17:43.96:0,44,1806	0/0:19,0:19:51.18:0,51,2213	0/0:19,0:19:51.07:0,51,1985	0/0:41,0:41:96.33:0,96,4557	0/0:19,0:19:45.15:0,45,1959	0/0:19,0:19:48.16:0,48,2067	0/0:11,0:11:27.09:0,27,1193	0/0:9,0:9:27.05:0,27,1055	0/0:17,0:17:26.18:0,26,1957	0/0:11,0:11:33.11:0,33,1428	1/1:1,17:18:48.16:1508,48,0	0/0:21,0:21:35.21:0,35,2285	0/0:20,0:20:54.14:0,54,2617	0/0:10,0:10:24.08:0,24,1232	0/0:20,0:20:57.20:0,57,2786	0/0:23,0:23:60.21:0,60,2979	0/0:13,0:13:36.12:0,36,1814	0/0:13,0:13:33.11:0,33,1340	0/0:26,0:26:66.17:0,66,2634	0/0:12,0:12:27.09:0,27,1159	0/0:14,0:14:33.11:0,33,1356	0/0:16,0:16:45.15:0,45,1947	0/0:23,0:23:63.22:0,63,2657	0/0:9,0:9:21.07:0,21,914
chr10	24886156	.	CT	C	17860.06	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-1.361;DP=624;FS=9.564;HRun=5;HaplotypeScore=59.8924;InbreedingCoeff=0.9823;MQ=78.38;MQ0=0;MQRankSum=-8.771;QD=30.17;ReadPosRankSum=5.720;VQSLOD=4.7231;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,38:41:99:1259,111,0	1/1:2,10:12:30.08:340,30,0	0/0:18,0:18:48.16:0,48,644	0/0:14,0:14:31.76:0,32,414	1/1:1,22:23:60.17:680,60,0	1/1:0,27:27:72.21:817,72,0	1/1:0,4:4:12.03:136,12,0	1/1:3,25:28:75.17:823,75,0	1/1:0,14:14:42.12:476,42,0	1/1:0,34:34:99:1139,102,0	1/1:1,30:31:87.25:987,87,0	1/1:1,18:19:54.15:612,54,0	1/1:1,22:23:63.18:714,63,0	1/1:1,28:29:84.24:953,84,0	1/1:1,18:19:45.13:510,45,0	1/1:0,23:23:63.18:715,63,0	1/1:0,16:16:42.12:476,42,0	1/1:0,19:19:54.15:612,54,0	1/1:7,16:23:48.10:523,48,0	1/1:1,31:32:93.26:1054,93,0	1/1:2,11:13:24.07:272,24,0	1/1:1,21:22:54.15:612,54,0	1/1:0,22:22:63.18:714,63,0	1/1:2,11:13:27.08:306,27,0	1/1:1,26:27:66.19:748,66,0	1/1:1,18:19:54.15:613,54,0	1/1:2,32:34:93.27:1054,93,0	1/1:3,22:25:63.18:714,63,0
chr10	24886878	.	CAAATAAAT	C	225.66	PASS	AC=8;AF=0.250;AN=32;BaseQRankSum=2.214;DP=264;FS=12.739;HRun=0;HaplotypeScore=63.7024;InbreedingCoeff=0.4550;MQ=65.41;MQ0=0;MQRankSum=-2.020;QD=4.42;ReadPosRankSum=-1.748;VQSLOD=-0.2722;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,2:12:3.01:73,3,0	0/0:5,0:5:6.02:0,6,243	./.	./.	./.	0/0:10,0:10:12.04:0,12,486	0/0:3,0:3:3.01:0,3,51	./.	0/0:8,0:8:6.02:0,6,243	./.	./.	0/0:2,0:3:6:0,6,144	0/0:8,0:8:3.01:0,3,121	0/0:10,0:10:3.01:0,3,121	./.	./.	1/1:14,4:18:3.01:73,3,0	1/1:8,2:10:3.01:69,3,0	1/1:9,2:10:6.02:116,6,0	./.	./.	./.	./.	0/0:5,0:5:3.01:0,3,76	0/0:4,0:4:6.02:0,6,243	0/0:9,0:9:9.02:0,9,270	0/0:17,0:23:11.95:0,12,93	0/0:23,0:23:42.14:0,42,1584
chr10	24887369	.	CT	C	476.54	PASS	AB=0.940;AC=5;AF=0.089;AN=56;BaseQRankSum=-0.157;DP=586;FS=0.690;HRun=1;HaplotypeScore=192.6214;InbreedingCoeff=0.2030;MQ=51.72;MQ0=13;MQRankSum=2.509;QD=5.54;ReadPosRankSum=0.660;VQSLOD=0.3127;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,1:30:3.71:0,4,125	0/0:8,0:8:9:0,9,83	0/0:13,0:5:15.05:0,15,206	0/0:9,1:7:14.59:0,15,182	0/0:24,0:24:12.66:0,13,105	0/0:25,0:25:18.05:0,18,216	0/1:13,0:13:21.13:21,0,249	0/0:44,0:40:99:0,120,1817	0/0:22,0:22:9.03:0,9,107	0/0:22,0:21:58.55:0,59,673	0/0:30,0:30:27.41:0,27,295	0/0:20,0:20:12.88:0,13,157	0/1:27,2:29:99:179,0,364	0/0:18,0:18:11.53:0,12,145	0/0:22,0:22:22.87:0,23,378	0/0:15,0:15:6.02:0,6,92	0/0:21,0:21:15.05:0,15,230	0/0:12,0:12:15.05:0,15,227	0/0:22,0:16:48.16:0,48,704	0/0:16,0:16:21.73:0,22,215	0/0:13,0:12:26.31:0,26,372	0/0:17,0:17:9.55:0,10,106	0/0:14,0:14:5.03:0,5,30	1/1:12,1:13:11.65:94,12,0	0/0:30,0:29:11.52:0,12,113	0/0:31,0:31:61.53:0,62,737	0/1:27,4:31:99:300,0,420	0/0:20,0:20:35.90:0,36,511
chr10	24887374	.	TATC	T	5270.99	PASS	AB=0.983;AC=23;AF=0.426;AN=54;BaseQRankSum=-7.358;DP=603;FS=0.467;HRun=0;HaplotypeScore=189.7766;InbreedingCoeff=-0.0297;MQ=56.97;MQ0=12;MQRankSum=0.410;QD=12.52;ReadPosRankSum=-1.594;VQSLOD=4.4114;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:20,11:30:4.08:114,4,0	0/0:8,0:8:8.67:0,9,51	0/0:15,0:8:18.05:0,18,238	0/0:14,0:11:18.63:0,19,218	0/0:27,0:27:19.98:0,20,140	0/0:24,0:24:14.99:0,15,136	1/1:13,0:13:19.38:192,19,0	0/1:45,0:41:59:1244,0,59	0/0:24,0:24:9.01:0,9,88	0/1:25,0:24:99:156,0,220	0/1:30,0:30:33.87:91,0,34	0/0:17,0:17:0.47:0,0,2	0/1:27,2:29:75.93:415,0,76	0/1:19,0:19:36.05:40,0,36	0/1:23,0:23:99:112,0,320	./.	0/0:19,0:18:8.89:0,9,60	1/1:1,11:12:15.05:229,15,0	0/1:21,0:16:38.83:406,0,39	0/1:19,0:19:44.24:44,0,69	0/1:15,0:14:9.07:380,0,9	0/0:19,0:19:11.31:0,11,69	0/1:15,0:15:8.85:9,0,9	1/1:12,1:13:11.80:122,12,0	0/1:30,0:29:7.33:7,0,38	0/1:30,1:31:13.55:617,0,14	1/1:18,12:30:74.46:869,74,0	0/1:17,3:20:85.68:223,0,86
chr10	24887377	.	C	CTATCTATCATCT	11765.07	PASS	AB=0.735;AC=46;AF=0.852;AN=54;BaseQRankSum=-5.586;DP=618;FS=10.683;HRun=0;HaplotypeScore=223.1514;InbreedingCoeff=0.2822;MQ=57.42;MQ0=9;MQRankSum=-2.768;QD=20.86;ReadPosRankSum=5.026;VQSLOD=2.4722;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:30:10.77:113,11,0	1/1:0,7:8:9.03:402,9,0	0/0:17,0:10:21.07:0,21,338	0/1:15,0:13:8.80:9,0,249	0/1:2,24:29:44.29:274,0,44	1/1:0,0:24:15.05:474,15,0	1/1:12,0:13:27.48:392,27,0	1/1:10,0:40:59.34:765,59,0	1/1:1,0:25:9.03:274,9,0	1/1:3,16:25:69.18:1700,69,0	1/1:0,0:29:8.77:292,9,0	1/1:0,0:17:2.68:61,3,0	1/1:16,1:30:56.51:1538,57,0	1/1:4,0:22:3.61:75,4,0	0/0:9,0:21:17.75:0,18,256	./.	1/1:2,0:19:8.95:69,9,0	0/1:11,0:12:8.90:9,0,271	1/1:2,0:18:22.32:215,22,0	1/1:1,0:22:8.02:94,8,0	0/1:0,0:14:37.20:102,0,37	1/1:0,16:18:1.06:328,1,0	1/1:0,12:16:6.02:211,6,0	1/1:11,0:15:12.01:243,12,0	1/1:2,0:30:5.88:270,6,0	1/1:2,0:32:87.09:2031,87,0	1/1:27,0:31:69.19:1414,69,0	1/1:5,0:19:24.01:409,24,0
chr10	24887557	.	CTT	C	7767.48	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-4.815;DP=617;FS=5.019;HRun=12;HaplotypeScore=158.1732;InbreedingCoeff=0.9409;MQ=62.96;MQ0=5;MQRankSum=1.033;QD=20.71;ReadPosRankSum=2.368;VQSLOD=2.7209;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:11,3:59:15.39:0,15,433	1/1:0,5:5:12.03:122,12,0	0/0:13,0:10:19.48:0,19,145	0/0:12,0:8:11.82:0,12,64	1/1:7,24:34:52.90:589,53,0	1/1:2,13:15:39.08:397,39,0	1/1:6,15:24:19.67:369,20,0	0/0:10,0:18:22.70:0,23,113	1/1:2,12:14:33.07:336,33,0	1/1:8,20:30:59.30:577,59,0	1/1:1,14:19:41.17:358,41,0	1/1:4,14:18:33.04:336,33,0	1/1:5,17:22:42.06:427,42,0	1/1:3,21:23:60.13:610,60,0	0/0:3,0:15:27.45:0,27,97	1/1:2,15:19:41.55:461,42,0	0/0:7,0:25:34.93:0,35,123	0/0:5,0:23:40.69:0,41,175	0/0:4,1:18:1.68:0,2,82	0/0:7,1:23:7.66:0,8,127	0/0:6,1:31:24.98:0,25,168	1/1:5,16:21:41.80:408,42,0	1/1:4,20:25:47.66:469,48,0	1/1:0,28:29:66.15:671,66,0	1/1:4,18:22:42.05:426,42,0	1/1:5,15:20:42.02:426,42,0	1/1:1,21:22:53.55:548,54,0	1/1:0,10:11:17.78:235,18,0
chr10	24889441	.	GT	G	10016.23	PASS	AB=0.571;AC=47;AF=0.839;AN=56;BaseQRankSum=-1.972;DP=542;FS=8.098;HRun=10;HaplotypeScore=57.3974;InbreedingCoeff=0.8035;MQ=71.93;MQ0=0;MQRankSum=-2.327;QD=20.48;ReadPosRankSum=2.857;VQSLOD=5.7375;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:20:33.74:0,34,188	0/1:1,3:4:21.18:66,0,21	0/0:11,0:11:9.18:0,9,120	0/0:6,0:6:3.89:0,4,35	1/1:3,30:33:80.96:703,81,0	1/1:3,29:32:71.98:625,72,0	1/1:2,12:14:32.98:287,33,0	1/1:6,25:31:74.95:645,75,0	1/1:0,12:12:35.99:312,36,0	1/1:3,20:23:59.95:516,60,0	1/1:2,27:29:74.96:651,75,0	1/1:0,18:18:38.99:339,39,0	1/1:1,13:14:32.98:286,33,0	1/1:3,14:17:35.99:313,36,0	0/0:16,0:16:42.11:0,42,465	1/1:1,12:13:32.99:286,33,0	1/1:2,16:18:41.99:365,42,0	1/1:1,14:15:38.96:332,39,0	1/1:7,17:24:50.92:430,51,0	1/1:4,23:27:31.93:512,32,0	1/1:0,5:5:15:130,15,0	1/1:5,17:22:50.98:443,51,0	1/1:4,23:27:68.98:599,69,0	1/1:1,8:9:23.99:208,24,0	1/1:6,16:22:44.99:391,45,0	1/1:7,25:32:74.96:651,75,0	1/1:9,31:40:85.24:752,85,0	1/1:2,6:8:20.92:174,21,0
chr10	24892018	.	CT	C	4363.41	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=11.850;DP=536;FS=7.147;HRun=1;HaplotypeScore=51.4322;InbreedingCoeff=0.9880;MQ=79.06;MQ0=2;MQRankSum=-1.332;QD=37.62;ReadPosRankSum=0.529;VQSLOD=4.8187;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:60.08:0,60,901	0/0:7,0:7:21.07:0,21,336	0/0:18,0:17:41.93:0,42,637	0/0:12,0:12:33.07:0,33,480	0/0:38,0:38:99:0,111,1693	0/0:15,0:15:45.14:0,45,688	0/0:9,0:9:27.07:0,27,397	1/1:0,33:31:90.27:1207,90,0	0/0:19,0:19:57.18:0,57,885	0/0:33,0:33:99:0,99,1548	0/0:31,0:31:93.30:0,93,1462	0/0:14,0:14:42.12:0,42,625	0/0:21,0:21:63.21:0,63,999	0/0:26,0:26:78.25:0,78,1216	0/0:12,0:12:36.12:0,36,573	0/0:18,0:18:51.16:0,51,784	1/1:0,24:24:69.23:964,69,0	1/1:0,6:6:11.77:138,12,0	1/1:0,19:18:51.17:713,51,0	1/1:0,26:26:75.25:1047,75,0	1/1:1,7:7:21.07:294,21,0	0/0:12,0:12:36.12:0,36,575	0/0:26,0:26:78.24:0,78,1187	0/0:5,0:5:15.05:0,15,239	0/0:26,0:26:75.26:0,75,1197	0/0:29,0:29:87.29:0,87,1349	0/0:19,0:19:54.17:0,54,836	0/0:9,0:9:27.09:0,27,431
chr10	24892281	.	C	CA	4212.68	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-14.174;DP=607;FS=18.018;HRun=7;HaplotypeScore=85.6902;InbreedingCoeff=0.9986;MQ=87.95;MQ0=0;MQRankSum=-0.524;QD=29.46;ReadPosRankSum=-3.128;VQSLOD=2.6432;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:60.09:0,60,579	0/0:9,0:9:21.03:0,21,203	0/0:30,0:30:73.85:0,74,689	0/0:24,0:24:53.83:0,54,492	0/0:18,0:18:51.08:0,51,492	0/0:14,0:14:39.06:0,39,377	0/0:28,0:28:75.11:0,75,724	1/1:3,23:26:66.19:784,66,0	0/0:26,0:26:69:0,69,646	0/0:23,0:23:54.07:0,54,517	0/0:19,0:19:54.08:0,54,521	0/0:27,0:27:69.10:0,69,664	0/0:23,0:23:69.11:0,69,666	0/0:22,0:22:63.10:0,63,608	0/0:26,0:26:63.06:0,63,600	0/0:22,0:22:57.08:0,57,550	1/1:3,28:31:78.22:930,78,0	1/1:2,16:18:33.10:399,33,0	1/1:1,26:27:78.24:942,78,0	1/1:1,11:13:35.98:413,36,0	1/1:3,25:28:63.15:745,63,0	0/0:16,0:16:33.04:0,33,319	0/0:17,0:17:42.06:0,42,406	0/0:28,0:28:75.11:0,75,724	0/0:18,0:18:51.08:0,51,493	0/0:23,0:23:51.07:0,51,492	0/0:20,0:20:60.10:0,60,579	0/0:8,0:8:24.04:0,24,232
chr10	24892358	.	ACAACAACAG	A	661.59	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=3.227;DP=724;FS=4.550;HRun=0;HaplotypeScore=216.2930;InbreedingCoeff=0.7142;MQ=57.03;MQ0=21;MQRankSum=-0.965;QD=16.96;ReadPosRankSum=-3.858;VQSLOD=2.2303;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:34:81.06:0,81,2933	0/0:9,0:9:27.09:0,27,920	0/0:49,0:15:14.83:0,15,234	0/0:69,0:34:55.70:0,56,1002	0/0:17,0:16:36.09:0,36,1013	0/0:21,0:20:45.12:0,45,1146	0/0:34,0:34:78.27:0,78,2374	1/1:5,15:20:45.09:756,45,0	0/0:25,0:25:63.18:0,63,1877	0/0:23,0:23:48.10:0,48,1375	0/0:17,0:16:36.12:0,36,925	0/0:23,0:23:54.17:0,54,1878	0/0:26,0:26:66.17:0,66,2106	0/0:26,0:26:60.19:0,60,2099	0/0:36,0:36:93.32:0,93,3208	0/0:35,0:35:93.32:0,93,3114	0/0:32,0:32:72.23:0,72,2097	0/1:19,0:19:3.36:3,0,726	0/0:23,0:20:36.11:0,36,838	0/0:19,0:17:45.15:0,45,1238	0/0:40,0:38:92.48:0,92,2875	0/0:11,0:9:18.06:0,18,496	0/0:15,0:15:21.07:0,21,568	0/0:36,0:36:87.19:0,87,2956	0/0:14,0:14:33.10:0,33,1145	0/0:21,0:21:51.17:0,51,1579	0/0:19,0:19:48.16:0,48,1692	0/0:10,0:10:24.06:0,24,828
chr10	24892705	.	CA	C	3882.49	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=3.299;DP=390;FS=38.986;HRun=2;HaplotypeScore=57.9908;InbreedingCoeff=0.9779;MQ=79.59;MQ0=0;MQRankSum=-0.912;QD=36.98;ReadPosRankSum=-0.236;VQSLOD=0.8831;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:60.20:0,60,897	0/0:4,0:4:12.04:0,12,180	0/0:8,0:8:24.08:0,24,338	0/0:10,0:10:26.98:0,27,372	0/0:15,0:15:45.15:0,45,673	0/0:25,0:25:72.24:0,72,1077	0/0:11,0:11:33.11:0,33,493	1/1:0,29:29:87.28:1130,87,0	0/0:14,0:14:39.12:0,39,565	0/0:18,0:18:54.18:0,54,809	0/0:11,0:11:33.11:0,33,492	0/0:10,0:10:27.07:0,27,382	0/0:11,0:11:33.11:0,33,477	0/0:15,0:15:45.14:0,45,652	0/0:13,0:13:39.13:0,39,585	0/0:10,0:10:30.10:0,30,446	1/1:0,18:18:51.17:662,51,0	1/1:1,3:4:9.03:117,9,0	1/1:1,18:19:54.16:688,54,0	1/1:0,15:15:42.14:545,42,0	1/1:0,20:20:57.19:740,57,0	0/0:12,0:12:36.10:0,36,504	0/0:7,0:7:21.07:0,21,315	0/0:6,0:6:18.04:0,18,249	0/0:22,0:22:66.22:0,66,988	0/0:8,0:8:24.08:0,24,360	0/0:22,0:20:66.21:0,66,968	0/0:11,0:11:33.11:0,33,495
chr10	24893905	.	A	AT	23954.68	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-7.897;DP=579;FS=4.721;HRun=1;HaplotypeScore=52.3362;InbreedingCoeff=0.9928;MQ=84.11;MQ0=0;MQRankSum=-9.332;QD=43.95;ReadPosRankSum=4.680;VQSLOD=4.6122;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,12:12:30.10:479,30,0	1/1:0,8:8:24.08:384,24,0	0/0:15,0:15:18.16:0,18,495	0/0:19,0:19:49.04:0,49,653	1/1:0,19:19:51.17:815,51,0	1/1:0,28:28:78.27:1247,78,0	1/1:0,13:13:36.12:575,36,0	1/1:1,31:32:93.28:1416,93,0	1/1:1,16:17:48.16:767,48,0	1/1:0,36:36:99:1722,108,0	1/1:0,36:36:96.33:1535,96,0	1/1:0,24:24:69.24:1103,69,0	1/1:0,23:23:66.23:1055,66,0	1/1:0,29:29:75:1199,75,0	1/1:0,22:22:60.20:959,60,0	1/1:0,12:12:36.12:576,36,0	1/1:0,11:11:33.11:527,33,0	1/1:1,9:10:24.08:383,24,0	1/1:0,24:24:72.25:1144,72,0	1/1:1,36:38:99:1571,99,0	1/1:1,10:11:30.10:480,30,0	1/1:0,19:19:54.18:863,54,0	1/1:0,18:18:48.16:767,48,0	1/1:0,11:11:30.10:480,30,0	1/1:0,21:21:63.21:1007,63,0	1/1:0,22:22:63.20:980,63,0	1/1:0,31:31:78.27:1247,78,0	1/1:0,18:18:42.14:671,42,0
chr10	24895283	.	TAAC	T	9485.33	PASS	AB=0.833;AC=46;AF=0.885;AN=52;BaseQRankSum=-3.305;DP=656;FS=3.797;HRun=0;HaplotypeScore=120.5803;InbreedingCoeff=0.4795;MQ=65.17;MQ0=5;MQRankSum=0.130;QD=16.67;ReadPosRankSum=0.922;VQSLOD=4.7711;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,14:21:33.11:439,33,0	1/1:3,8:11:21.07:280,21,0	0/0:20,0:14:3.01:0,3,58	0/1:32,0:24:12.38:12,0,32	1/1:15,15:30:45.15:593,45,0	1/1:7,17:24:33.11:439,33,0	1/1:6,3:9:6.02:80,6,0	./.	1/1:11,18:29:48.16:639,48,0	1/1:14,20:35:60.15:761,60,0	1/1:10,8:18:27.09:359,27,0	1/1:11,10:22:30.06:380,30,0	1/1:10,16:26:39.09:500,39,0	1/1:10,18:28:54.18:718,54,0	0/0:23,0:23:33.11:0,33,415	1/1:14,14:28:36.12:479,36,0	1/1:16,0:24:14.83:101,15,0	./.	1/1:15,0:22:14.88:105,15,0	1/1:14,0:30:38.08:260,38,0	1/1:11,0:15:2.98:21,3,0	1/1:12,6:18:18.06:239,18,0	1/1:9,14:23:29.93:399,30,0	1/1:5,14:19:36.12:479,36,0	0/1:10,10:20:82.56:326,0,83	1/1:18,17:34:48.10:639,48,0	1/1:8,22:30:56.88:758,57,0	1/1:4,16:20:36.12:479,36,0
chr10	24895322	.	C	CAAT	2156.26	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-5.213;DP=716;FS=1.363;HRun=0;HaplotypeScore=157.7708;InbreedingCoeff=0.9847;MQ=74.21;MQ0=11;MQRankSum=-1.975;QD=15.85;ReadPosRankSum=-3.489;VQSLOD=3.1106;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:77.89:0,78,685	0/0:10,0:10:26.97:0,27,257	0/0:44,0:31:86.05:0,86,891	0/0:30,0:20:33.83:0,34,380	0/0:37,0:36:94.16:0,94,846	0/0:31,0:31:71.93:0,72,648	0/0:15,0:15:41.91:0,42,353	1/1:26,0:26:68.94:595,69,0	0/0:24,0:24:66.08:0,66,640	0/0:36,0:36:99:0,102,975	0/0:24,0:23:68.94:0,69,615	0/0:29,0:29:83.98:0,84,749	0/0:26,0:26:65.22:0,65,585	0/0:30,0:30:84.07:0,84,797	1/1:0,24:25:33.11:761,33,0	0/0:21,0:21:57.05:0,57,542	1/1:19,0:19:25:202,25,0	1/1:3,0:3:8.91:61,9,0	1/1:19,0:18:26.52:241,27,0	1/1:27,0:27:14.20:236,14,0	1/1:17,0:17:34.82:255,35,0	0/0:22,0:22:65.94:0,66,571	0/0:28,0:28:74.89:0,75,667	0/0:23,0:23:51.93:0,52,491	0/0:24,0:24:66.04:0,66,645	0/0:31,0:30:87.12:0,87,838	0/0:39,0:38:99:0,108,987	0/0:27,0:27:52.22:0,52,567
chr10	24896035	.	A	AG	1386.85	PASS	AB=0.819;AC=9;AF=0.161;AN=56;BaseQRankSum=2.395;DP=731;FS=69.562;HRun=1;HaplotypeScore=195.7503;InbreedingCoeff=-0.0081;MQ=56.96;MQ0=49;MQRankSum=-0.829;QD=10.05;ReadPosRankSum=-1.256;VQSLOD=-0.3219;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:11,17:25:17.97:397,0,18	0/0:9,0:9:14.91:0,15,180	0/0:72,0:25:62.41:0,62,741	0/0:81,0:27:38.33:0,38,499	0/0:24,0:23:45.24:0,45,573	0/0:27,0:26:51.69:0,52,484	0/0:31,0:29:52:0,52,614	0/1:14,3:17:99:165,0,206	0/0:17,0:12:30.21:0,30,334	0/0:30,0:24:65.34:0,65,724	0/0:27,0:26:43.83:0,44,549	0/0:21,0:18:48.23:0,48,523	0/0:27,0:24:39.57:0,40,517	0/0:33,0:32:78.25:0,78,1019	0/1:25,6:27:55.52:388,0,56	0/0:29,0:26:63.32:0,63,788	0/1:10,2:9:62.08:62,0,100	0/1:6,1:6:45.95:59,0,46	0/1:11,1:7:67.24:67,0,109	0/1:16,7:21:48.49:342,0,48	1/1:4,4:7:2.41:45,2,0	0/0:16,0:13:31.30:0,31,401	0/0:28,0:25:53.89:0,54,610	0/0:23,0:17:41.57:0,42,520	0/0:26,0:26:57.05:0,57,638	0/0:30,0:28:80.92:0,81,1042	0/0:28,0:28:63.33:0,63,774	0/0:12,0:10:12.87:0,13,171
chr10	24896039	.	AGAGG	A	1074.76	PASS	AB=0.917;AC=11;AF=0.196;AN=56;BaseQRankSum=3.594;DP=746;FS=5.421;HRun=0;HaplotypeScore=237.3800;InbreedingCoeff=0.1383;MQ=51.66;MQ0=57;MQRankSum=-6.463;QD=4.91;ReadPosRankSum=-5.782;VQSLOD=0.7264;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:23:27.15:113,0,27	0/0:9,0:9:22.28:0,22,301	0/0:64,0:20:12.54:0,13,591	0/1:74,0:22:21.35:21,0,521	0/0:24,0:23:31.58:0,32,751	0/0:27,0:27:15.69:0,16,614	0/0:33,0:31:57.23:0,57,761	0/1:18,1:20:95.55:96,0,369	0/0:21,0:15:30.06:0,30,503	0/0:33,0:27:63.35:0,63,1091	0/0:28,0:28:44.70:0,45,878	0/0:21,0:20:37.51:0,38,671	0/0:26,0:22:10.41:0,10,494	0/0:31,0:30:42.27:0,42,1241	0/1:26,3:26:18.33:420,0,18	0/0:29,0:26:37.40:0,37,1076	0/1:10,1:9:50.26:50,0,138	1/1:7,1:6:10.24:107,10,0	0/1:15,1:9:55.62:56,0,142	0/1:17,6:22:58.93:340,0,59	1/1:7,0:6:4.38:23,4,0	0/0:17,0:14:30.46:0,30,619	0/0:30,0:28:30.85:0,31,844	0/0:26,0:17:44.70:0,45,858	0/0:27,0:29:41.73:0,42,976	0/0:29,0:27:80.39:0,80,1404	0/0:30,0:29:46.21:0,46,962	0/0:12,0:10:13.11:0,13,323
chr10	24896438	.	TG	T	5723	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=7.053;DP=632;FS=5.726;HRun=4;HaplotypeScore=72.6849;InbreedingCoeff=0.9997;MQ=76.96;MQ0=0;MQRankSum=-1.850;QD=32.52;ReadPosRankSum=-1.254;VQSLOD=4.8529;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,40:40:99:1279,108,0	0/0:10,0:10:30.08:0,30,401	0/0:15,0:14:39.08:0,39,504	0/0:23,0:23:56.34:0,56,679	0/0:29,0:29:87.28:0,87,1201	0/0:27,0:27:75.24:0,75,1032	0/0:24,0:24:69.23:0,69,966	1/1:2,22:24:66.15:755,66,0	0/0:20,0:20:60.17:0,60,798	0/0:30,0:30:78.25:0,78,1062	0/0:25,0:25:66.20:0,66,900	0/0:20,0:20:60.17:0,60,804	0/0:27,0:27:81.23:0,81,1083	0/0:21,0:21:60.20:0,60,840	1/1:0,25:25:69.21:828,69,0	0/0:27,0:27:81.25:0,81,1101	1/1:0,20:20:54.17:648,54,0	1/1:0,12:12:30.09:360,30,0	1/1:0,21:21:63.18:738,63,0	1/1:0,22:22:60.18:720,60,0	1/1:1,11:12:33.10:396,33,0	0/0:17,0:17:45.15:0,45,624	0/0:18,0:18:51.17:0,51,713	0/0:22,0:22:66.18:0,66,902	0/0:29,0:29:78.25:0,78,1073	0/0:28,0:28:81.27:0,81,1124	0/0:32,0:31:96.31:0,96,1327	0/0:12,0:12:36.12:0,36,497
chr10	24896785	.	CT	C	3634.30	PASS	AB=0.913;AC=17;AF=0.304;AN=56;BaseQRankSum=-5.200;DP=507;FS=4.668;HRun=10;HaplotypeScore=66.6674;InbreedingCoeff=0.8775;MQ=71.09;MQ0=5;MQRankSum=0.714;QD=17.99;ReadPosRankSum=1.466;VQSLOD=4.5428;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,26:29:68.98:599,69,0	0/0:7,0:7:18.05:0,18,199	0/1:19,2:14:17.49:17,0,22	0/0:17,0:12:9.01:0,9,85	0/0:16,1:17:16.06:0,16,405	0/0:17,1:18:25.09:0,25,496	0/0:9,0:9:24.02:0,24,252	1/1:9,18:28:55.88:456,56,0	0/0:14,0:14:30.07:0,30,323	0/0:20,0:19:33.08:0,33,358	0/0:17,1:18:16.04:0,16,397	0/0:18,1:18:22.03:0,22,452	0/0:20,0:20:48.10:0,48,513	0/0:16,0:16:30.07:0,30,323	1/1:1,25:28:73.06:611,73,0	0/0:13,0:13:39.09:0,39,423	1/1:4,29:33:79.82:701,80,0	1/1:6,15:21:38.97:338,39,0	1/1:2,14:16:41.98:365,42,0	1/1:3,8:11:23.99:208,24,0	1/1:1,14:15:38.99:339,39,0	0/0:16,0:16:42.08:0,42,446	0/0:22,0:22:41.67:0,42,425	0/0:13,0:13:39.11:0,39,431	0/0:27,2:29:20.08:0,20,672	0/0:18,1:18:10.02:0,10,328	0/0:16,0:16:39.11:0,39,431	0/0:2,0:2:6.02:0,6,66
chr10	24896942	.	GT	G	7043.63	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=6.819;DP=469;FS=2.134;HRun=8;HaplotypeScore=52.3827;InbreedingCoeff=0.9928;MQ=79.87;MQ0=0;MQRankSum=-2.635;QD=24.54;ReadPosRankSum=4.035;VQSLOD=5.5139;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:63.17:0,63,738	1/1:0,5:5:11.83:116,12,0	0/0:21,0:21:41.43:0,41,403	0/0:8,0:9:18.05:0,18,210	1/1:2,18:20:54.04:512,54,0	1/1:4,12:16:33.05:319,33,0	1/1:0,10:10:27.04:261,27,0	0/0:24,0:24:63.16:0,63,727	1/1:1,13:14:30.05:290,30,0	1/1:0,27:27:81.12:777,81,0	1/1:1,15:16:38.21:375,38,0	1/1:1,14:15:42.07:405,42,0	1/1:1,21:22:57.05:550,57,0	1/1:0,14:14:36.06:348,36,0	0/0:21,0:21:60.13:0,60,679	1/1:0,10:10:27.04:261,27,0	0/0:25,0:25:69.18:0,69,808	0/0:12,0:12:36.11:0,36,435	0/0:16,0:16:39.12:0,39,469	0/0:20,0:20:60.16:0,60,701	0/0:12,0:12:33.09:0,33,386	1/1:0,10:10:24.03:232,24,0	1/1:0,12:12:30.05:290,30,0	1/1:0,8:8:24.04:232,24,0	1/1:1,26:27:63.09:608,63,0	1/1:2,21:23:63.09:603,63,0	1/1:4,22:26:54.09:521,54,0	1/1:0,12:12:36.06:347,36,0
chr10	24897252	.	A	ATGTGTGTG	13640.02	PASS	AB=1.000;AC=49;AF=0.875;AN=56;BaseQRankSum=-4.615;DP=614;FS=5.669;HRun=0;HaplotypeScore=172.5150;InbreedingCoeff=0.4242;MQ=56.11;MQ0=18;MQRankSum=-3.774;QD=25.12;ReadPosRankSum=-0.864;VQSLOD=3.8453;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:27:39.06:0,39,872	1/1:5,4:9:13.22:450,13,0	0/0:43,0:16:3:0,3,77	0/1:38,0:17:0.76:1,0,50	1/1:14,0:12:12.02:206,12,0	1/1:17,4:30:21.06:651,21,0	1/1:10,0:10:18.05:403,18,0	0/1:24,0:23:3.99:341,0,4	1/1:8,13:21:5.99:146,6,0	1/1:9,2:19:32.67:641,33,0	1/1:7,13:22:17.72:705,18,0	1/1:10,14:25:30.10:1181,30,0	1/1:6,9:16:18.95:675,19,0	1/1:4,19:25:21.07:809,21,0	1/1:25,0:24:3.94:253,4,0	1/1:4,13:19:27.09:1056,27,0	1/1:25,0:25:17.95:511,18,0	1/1:8,0:8:3.01:102,3,0	1/1:25,0:24:6.94:131,7,0	1/1:19,0:19:9.01:207,9,0	0/1:14,0:13:7.90:15,0,8	1/1:2,8:14:15.05:512,15,0	1/1:4,9:14:11.91:437,12,0	1/1:8,12:23:9.03:373,9,0	1/1:11,15:28:24.08:875,24,0	1/1:12,17:27:63.15:1383,63,0	1/1:26,4:32:60.85:1328,61,0	1/1:4,7:11:6.01:249,6,0
chr10	24897253	.	T	TGG	1973.95	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=10.390;DP=619;FS=0.000;HRun=1;HaplotypeScore=172.8346;InbreedingCoeff=-0.0881;MQ=56.08;MQ0=18;MQRankSum=-9.694;QD=4.50;ReadPosRankSum=1.994;VQSLOD=-0.6187;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:31:57.07:0,57,708	0/1:10,0:9:15.34:15,0,20	0/0:43,0:16:44.83:0,45,427	0/0:39,0:17:35.27:0,35,473	0/0:14,0:12:2.38:0,2,84	0/1:30,0:30:18.01:18,0,135	0/1:10,0:10:12.73:13,0,96	1/1:23,0:22:45.91:421,46,0	0/0:21,0:21:5.84:0,6,77	0/1:19,0:19:15.81:16,0,214	0/1:22,0:22:7.58:34,0,8	0/1:25,0:25:39.95:48,0,40	0/1:16,0:16:29.14:29,0,29	0/1:24,0:24:31.25:31,0,44	1/1:25,0:24:36.36:262,36,0	0/1:19,0:19:1.47:46,0,1	1/1:26,0:26:11.41:388,11,0	1/1:8,0:8:10.78:74,11,0	1/1:25,0:24:13.69:335,14,0	1/1:6,13:19:20.13:147,20,0	1/1:14,0:13:19.95:131,20,0	0/1:14,0:14:20.80:21,0,33	0/1:14,0:14:9.34:33,0,9	0/1:24,0:24:9.77:10,0,17	0/1:28,0:28:32.42:32,0,147	0/1:33,0:28:35.84:36,0,277	0/0:31,0:31:0.63:0,1,319	0/1:11,0:11:7.20:7,0,17
chr10	24897256	.	G	GTGTGTGTGTGTGTGTGTGTC	7798.23	PASS	AB=0.991;AC=35;AF=0.625;AN=56;BaseQRankSum=4.477;DP=640;FS=5.717;HRun=0;HaplotypeScore=297.5637;InbreedingCoeff=-0.1555;MQ=55.64;MQ0=18;MQRankSum=-6.217;QD=15.05;ReadPosRankSum=1.924;VQSLOD=3.0412;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:33:47.79:0,48,1868	0/1:10,0:10:8.16:63,0,8	0/0:45,0:17:11.98:0,12,173	0/0:41,0:18:15.01:0,15,164	0/1:15,0:13:35.88:47,0,36	0/1:29,0:29:52.20:85,0,52	0/1:12,0:12:9.43:138,0,9	0/1:26,0:26:2.07:927,0,2	0/1:21,0:21:15.69:16,0,16	0/1:19,0:19:92.82:93,0,135	1/1:23,0:23:14.41:83,14,0	1/1:26,0:26:7.50:240,8,0	0/1:15,0:16:9.89:96,0,10	0/1:25,0:25:21.08:103,0,21	1/1:23,0:22:21.04:753,21,0	1/1:19,0:19:3.72:157,4,0	1/1:26,0:26:48.04:1872,48,0	1/1:3,5:11:6.02:560,6,0	1/1:25,0:25:35.92:890,36,0	1/1:20,0:19:11.83:565,12,0	1/1:12,0:13:12.03:174,12,0	0/1:15,0:15:16.52:147,0,17	0/1:14,0:14:31.55:38,0,32	0/1:24,0:24:7.88:37,0,8	0/1:27,0:27:35.07:82,0,35	0/1:33,0:28:31.36:365,0,31	0/1:31,0:31:78.04:232,0,78	1/1:11,0:11:5.84:33,6,0
chr10	24897278	.	CTG	C	523.48	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-0.878;DP=636;FS=0.000;HRun=0;HaplotypeScore=144.5574;InbreedingCoeff=0.8320;MQ=46.91;MQ0=21;MQRankSum=3.883;QD=8.58;ReadPosRankSum=1.480;VQSLOD=3.4335;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,29:33:36.91:454,37,0	0/0:13,0:12:14.70:0,15,217	0/0:47,0:17:32.49:0,32,514	0/0:47,0:17:23.30:0,23,188	0/0:21,0:19:30.92:0,31,403	0/0:25,0:25:35.83:0,36,478	0/0:16,0:16:39.01:0,39,479	0/0:34,0:33:63.21:0,63,923	0/0:18,0:18:21.54:0,22,321	0/0:17,0:17:2.19:0,2,455	0/0:23,0:23:25.33:0,25,353	0/0:20,0:20:26.75:0,27,337	0/0:16,0:16:21.54:0,22,307	0/0:20,0:20:24.08:0,24,347	1/1:27,0:26:19.67:189,20,0	0/0:18,0:18:27.08:0,27,386	0/0:25,0:25:41.78:0,42,503	0/0:6,0:6:9.03:0,9,126	0/0:24,0:24:42.13:0,42,563	0/0:19,0:18:11.96:0,12,123	0/0:13,0:12:12.17:0,12,114	0/0:14,0:14:18.06:0,18,250	0/0:15,0:15:24.29:0,24,328	0/0:23,0:23:21.48:0,21,296	0/0:22,0:22:32.85:0,33,463	0/0:33,0:28:52.98:0,53,783	0/0:32,1:33:28.31:0,28,776	0/0:13,0:13:18.06:0,18,249
chr10	24898125	.	C	CA	16811.17	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-5.370;DP=685;FS=21.994;HRun=7;HaplotypeScore=82.8405;InbreedingCoeff=0.9854;MQ=62.27;MQ0=0;MQRankSum=-0.667;QD=25.28;ReadPosRankSum=3.188;VQSLOD=3.3906;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,24:34:25.14:714,25,0	1/1:3,14:17:42.13:507,42,0	0/0:11,0:10:24.03:0,24,229	0/0:9,0:8:13.41:0,13,167	1/1:4,23:27:46.24:831,46,0	1/1:1,26:27:78.24:942,78,0	1/1:1,18:19:45.14:544,45,0	1/1:7,1:26:52.78:287,53,0	1/1:2,12:14:30.09:362,30,0	1/1:6,31:37:93.28:1113,93,0	1/1:4,21:25:60.14:708,60,0	1/1:3,17:20:48.15:579,48,0	1/1:2,35:37:99:1232,102,0	1/1:5,16:21:48.15:580,48,0	1/1:3,33:36:99:1200,101,0	1/1:0,19:19:54.17:652,54,0	1/1:7,1:30:52.96:287,53,0	1/1:6,0:22:42.25:228,42,0	1/1:5,0:26:45.10:281,45,0	1/1:2,1:31:69.64:377,70,0	1/1:6,0:19:37.38:190,37,0	1/1:1,16:17:42.05:507,42,0	1/1:3,21:24:66.17:782,66,0	1/1:4,13:17:33.06:382,33,0	1/1:5,21:26:31.21:659,31,0	1/1:6,32:38:99:1190,99,0	1/1:4,37:41:79.35:1240,79,0	1/1:1,12:13:36.11:435,36,0
chr10	24899256	.	TACA	T	3932.72	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=2.791;DP=475;FS=1.589;HRun=0;HaplotypeScore=125.0694;InbreedingCoeff=0.9758;MQ=72.96;MQ0=0;MQRankSum=-10.605;QD=41.40;ReadPosRankSum=-2.480;VQSLOD=4.3101;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:48.16:0,48,1042	0/0:8,0:8:24.08:0,24,536	0/0:10,0:10:27.09:0,27,576	0/0:11,0:11:30.10:0,30,633	0/0:30,0:30:87.28:0,87,1901	0/0:21,0:21:57.18:0,57,1230	0/0:8,0:8:24.07:0,24,474	1/1:2,22:24:66.23:1074,66,0	0/0:10,0:10:30.10:0,30,670	0/0:33,0:33:93.31:0,93,2011	0/0:19,0:19:57.20:0,57,1273	0/0:9,0:9:27.09:0,27,580	0/0:19,0:19:54.19:0,54,1200	0/0:17,0:17:48.16:0,48,1073	0/0:18,0:18:54.19:0,54,1201	0/0:16,0:16:48.16:0,48,1049	1/1:1,13:14:32.79:538,33,0	1/1:1,8:9:24.08:392,24,0	1/1:5,16:20:45.15:735,45,0	1/1:0,23:23:69.24:1125,69,0	1/1:1,3:4:5.98:69,6,0	0/0:8,0:8:24.08:0,24,536	0/0:18,0:18:51.18:0,51,1139	0/0:9,0:9:27.09:0,27,603	0/0:29,0:29:78.27:0,78,1725	0/0:20,0:20:57.18:0,57,1175	0/0:27,0:27:72.25:0,72,1544	0/0:22,0:22:63.22:0,63,1396
chr10	24901846	.	GT	G	1346.92	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.116;DP=593;FS=0.000;HRun=1;HaplotypeScore=57.3968;InbreedingCoeff=0.9741;MQ=78.72;MQ0=0;MQRankSum=-1.846;QD=36.40;ReadPosRankSum=1.165;VQSLOD=3.7684;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,20:20:60.20:839,60,0	0/0:6,0:6:18.06:0,18,284	0/0:18,0:18:51.14:0,51,744	0/0:10,0:10:11.14:0,11,375	0/0:34,0:34:99:0,102,1608	0/0:22,0:22:66.23:0,66,1055	0/0:20,0:20:60.20:0,60,957	0/0:35,0:35:99:0,105,1617	0/0:23,0:23:69.24:0,69,1099	0/0:25,0:25:75.26:0,75,1200	0/0:30,0:30:90.28:0,90,1389	0/0:11,0:11:33.11:0,33,528	0/0:29,0:29:87.30:0,87,1377	0/0:15,0:15:45.15:0,45,720	1/1:0,17:17:45.15:629,45,0	0/0:17,0:17:51.15:0,51,789	0/0:13,0:13:36.12:0,36,575	0/0:13,0:13:33.11:0,33,527	0/0:19,0:19:57.17:0,57,886	0/0:30,0:30:90.29:0,90,1414	0/0:11,0:11:33.11:0,33,528	0/0:29,0:29:87.30:0,87,1389	0/0:43,0:43:99:0,129,2039	0/0:7,0:7:21.07:0,21,336	0/0:24,0:24:72.23:0,72,1129	0/0:28,0:28:81.28:0,81,1296	0/0:33,0:33:99:0,99,1536	0/0:11,0:11:26.69:0,27,407
chr10	24902579	.	A	AGT	13134.92	PASS	AB=0.714;AC=51;AF=0.911;AN=56;BaseQRankSum=2.847;DP=723;FS=3.363;HRun=0;HaplotypeScore=209.0638;InbreedingCoeff=0.7553;MQ=54.41;MQ0=5;MQRankSum=1.060;QD=20.11;ReadPosRankSum=4.411;VQSLOD=5.1632;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:39,0:39:52.07:754,52,0	1/1:11,0:11:24.08:338,24,0	0/0:30,0:18:39.09:0,39,461	0/0:40,0:23:37.33:0,37,451	1/1:26,0:26:51.04:704,51,0	1/1:23,0:22:32.99:419,33,0	1/1:23,0:21:26.75:371,27,0	1/1:35,0:35:5.57:831,6,0	1/1:28,0:28:19.97:696,20,0	1/1:40,0:39:53.44:1205,53,0	1/1:27,0:27:27.24:329,27,0	1/1:38,0:38:75.20:1031,75,0	1/1:19,0:19:30.07:375,30,0	1/1:20,0:20:41.95:531,42,0	1/1:13,14:27:18.06:233,18,0	1/1:25,1:25:15.89:405,16,0	1/1:23,1:24:29.61:253,30,0	1/1:9,0:10:11.60:78,12,0	1/1:17,0:17:36.06:442,36,0	1/1:30,0:30:57.99:792,58,0	1/1:37,0:37:19.76:140,20,0	1/1:22,0:22:44.97:566,45,0	1/1:26,0:27:38.66:491,39,0	0/1:18,12:30:5.01:86,0,5	1/1:20,0:20:35.91:450,36,0	1/1:23,0:23:57.92:755,58,0	1/1:24,0:24:51.36:618,51,0	1/1:7,0:7:15.37:242,15,0
chr10	24902583	.	T	TGT	13089.95	PASS	AB=1.000;AC=50;AF=0.893;AN=56;BaseQRankSum=2.913;DP=722;FS=2.410;HRun=0;HaplotypeScore=202.8817;InbreedingCoeff=0.6440;MQ=53.80;MQ0=5;MQRankSum=1.417;QD=20.05;ReadPosRankSum=3.004;VQSLOD=5.0221;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:38,0:38:63.45:782,63,0	1/1:11,0:11:24.08:338,24,0	0/0:30,0:18:39.09:0,39,461	0/0:39,0:22:37.33:0,37,451	1/1:27,0:27:51.04:704,51,0	1/1:24,0:23:32.99:419,33,0	1/1:21,0:19:26.92:371,27,0	0/1:42,0:42:12.43:714,0,12	1/1:26,0:26:19.97:696,20,0	1/1:41,0:40:54.32:1207,54,0	1/1:14,10:25:27.24:329,27,0	1/1:38,0:38:75.20:1031,75,0	1/1:18,0:18:30.07:375,30,0	1/1:19,0:19:41.95:531,42,0	1/1:27,0:27:18.06:233,18,0	1/1:28,0:27:15.89:405,16,0	1/1:25,0:25:35.54:306,36,0	1/1:11,0:11:11.60:78,12,0	1/1:16,0:16:36.06:442,36,0	1/1:29,0:29:57.99:792,58,0	1/1:37,0:37:19.76:140,20,0	1/1:22,0:22:44.97:566,45,0	1/1:25,0:26:39.01:491,39,0	0/1:28,0:28:5.01:86,0,5	1/1:20,0:20:35.91:450,36,0	1/1:23,0:23:57.18:743,57,0	1/1:24,0:24:51.36:618,51,0	1/1:7,0:7:15.37:242,15,0
chr10	24902587	.	T	TTC	131.14	PASS	AB=0.991;AC=10;AF=0.179;AN=56;BaseQRankSum=8.379;DP=738;FS=52.096;HRun=0;HaplotypeScore=257.5244;InbreedingCoeff=-0.0303;MQ=52.73;MQ0=5;MQRankSum=-7.411;QD=0.66;ReadPosRankSum=-2.674;VQSLOD=0.5528;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:13.56:0,14,132	0/1:11,0:11:18.56:44,0,19	0/0:28,0:16:36.13:0,36,672	0/0:39,0:22:62.55:0,63,888	0/0:27,0:27:17.73:0,18,112	0/0:24,1:24:20.23:0,20,150	0/1:22,1:21:13.55:41,0,14	0/0:41,0:41:99:0,101,947	0/0:27,0:27:0.85:0,1,76	0/1:40,0:39:0.18:0,0,401	0/1:23,0:23:3.72:4,0,54	0/0:39,0:39:0.54:0,1,112	0/1:17,0:17:26.78:27,0,146	0/0:18,1:19:0.42:0,0,76	1/1:23,3:26:7.95:78,8,0	0/1:28,1:28:35.53:36,0,195	0/0:27,0:27:8.66:0,9,196	0/0:11,0:11:15:0,15,141	0/0:15,0:15:29.06:0,29,268	0/0:32,0:32:11.23:0,11,246	0/0:37,0:37:35.67:0,36,383	0/0:24,0:24:21.16:0,21,246	0/0:28,0:28:10.84:0,11,75	0/0:29,0:29:4.18:0,4,38	0/1:22,0:22:28.68:29,0,145	0/0:25,0:25:31.03:0,31,277	0/0:25,0:25:10.09:0,10,208	0/1:8,0:8:1.48:1,0,66
chr10	24902588	.	GTGTT	G	4736.91	PASS	AB=0.996;AC=34;AF=0.607;AN=56;BaseQRankSum=-1.564;DP=737;FS=4.181;HRun=0;HaplotypeScore=248.5586;InbreedingCoeff=-0.2918;MQ=52.62;MQ0=5;MQRankSum=3.915;QD=7.05;ReadPosRankSum=-3.050;VQSLOD=3.5248;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:41,0:41:27.26:319,27,0	0/1:10,0:10:17.59:73,0,18	0/0:27,0:15:31.88:0,32,286	0/0:38,0:21:10.02:0,10,263	0/1:27,0:27:5.24:247,0,5	0/1:25,0:24:11.57:203,0,12	1/1:23,0:21:0.48:148,0,0	0/1:40,0:40:99:290,0,206	0/1:27,0:27:0.38:249,0,0	0/1:40,0:39:99:254,0,292	1/1:23,0:23:13.31:147,13,0	0/1:39,0:39:99:161,0,223	0/1:17,0:17:46.11:125,0,46	1/1:19,0:19:26.41:211,26,0	0/1:26,0:26:2.50:115,0,2	0/1:29,0:28:51.30:171,0,51	0/1:26,2:28:20:189,0,20	1/1:11,0:11:9.04:42,9,0	0/1:15,0:15:2.45:189,0,2	1/1:31,1:32:47.65:414,48,0	1/1:36,1:37:13.73:104,14,0	1/1:24,0:24:19:254,19,0	0/1:29,0:29:11.92:194,0,12	0/1:29,0:29:6.66:7,0,43	0/1:23,0:23:31.91:198,0,32	0/1:25,0:25:99:172,0,106	0/1:25,0:25:70.46:160,0,70	0/1:8,0:8:39.10:102,0,39
chr10	24902590	.	GTT	G	6637.30	PASS	AB=0.928;AC=48;AF=0.857;AN=56;BaseQRankSum=-0.306;DP=737;FS=9.025;HRun=3;HaplotypeScore=227.3168;InbreedingCoeff=0.3780;MQ=51.57;MQ0=5;MQRankSum=3.877;QD=9.85;ReadPosRankSum=-2.154;VQSLOD=-0.0447;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:40,2:42:42.52:364,43,0	1/1:10,0:10:15.20:104,15,0	0/0:25,0:13:31.88:0,32,286	0/0:38,0:21:10.03:0,10,266	1/1:25,2:27:38.31:288,38,0	1/1:22,2:23:9.56:214,10,0	1/1:21,2:21:30.12:196,30,0	0/1:42,0:42:99:323,0,136	1/1:25,2:27:28.14:301,28,0	0/1:37,1:37:44.18:299,0,44	1/1:23,0:23:24.97:161,25,0	1/1:39,0:39:13.65:248,14,0	1/1:15,1:16:9.45:155,9,0	1/1:18,1:19:32.34:226,32,0	1/1:27,0:27:22.29:161,22,0	1/1:28,1:28:18.15:239,18,0	1/1:6,22:28:15.97:328,16,0	1/1:1,10:11:12.86:157,13,0	0/1:11,6:17:3.97:361,0,4	1/1:3,29:32:49.76:667,50,0	1/1:4,34:38:21.28:402,21,0	1/1:23,1:24:48.88:324,49,0	1/1:29,1:30:28.78:256,29,0	0/1:29,0:29:13.02:13,0,14	1/1:22,1:23:26.79:243,27,0	1/1:25,0:25:6.48:246,6,0	1/1:22,1:23:30.81:253,31,0	1/1:8,0:8:9.02:108,9,0
chr10	24902591	.	T	TG	6679.66	PASS	AB=0.832;AC=36;AF=0.643;AN=56;BaseQRankSum=4.462;DP=715;FS=63.974;HRun=1;HaplotypeScore=215.9003;InbreedingCoeff=-0.2112;MQ=51.72;MQ0=6;MQRankSum=5.521;QD=10.23;ReadPosRankSum=5.624;VQSLOD=0.9694;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:28,11:39:19.05:538,19,0	1/1:6,4:10:23.59:211,24,0	0/0:25,0:13:39.13:0,39,531	0/0:37,0:20:50.58:0,51,549	1/1:22,4:27:50.57:437,51,0	0/1:21,3:23:45.91:247,0,46	0/1:19,4:21:2.70:180,0,3	0/1:39,0:40:99:140,0,497	0/1:20,7:27:19.91:301,0,20	0/1:27,10:36:99:575,0,105	1/1:19,3:22:15.23:283,15,0	1/1:23,17:40:29.72:590,30,0	0/1:9,6:15:25.33:87,0,25	1/1:14,4:18:37.51:325,38,0	0/1:19,7:26:37.95:185,0,38	0/1:19,8:26:54.65:222,0,55	1/1:28,0:28:24.87:119,25,0	0/1:11,0:11:7.01:32,0,7	0/1:17,0:17:61.54:120,0,62	1/1:32,0:32:52.37:470,52,0	1/1:37,0:37:0.30:59,0,0	0/1:15,8:23:39.62:322,0,40	1/1:22,5:27:10.40:331,10,0	0/1:20,7:27:22.70:54,0,23	0/1:17,6:23:18.21:242,0,18	0/1:19,4:23:95.35:270,0,95	0/1:15,7:22:4.34:219,0,4	0/1:6,2:8:0.60:120,0,1
chr10	24902592	.	T	TTCGTGTGTG	7056.91	PASS	AB=0.949;AC=35;AF=0.625;AN=56;BaseQRankSum=-0.319;DP=721;FS=5.179;HRun=0;HaplotypeScore=292.0657;InbreedingCoeff=0.6022;MQ=51.39;MQ0=6;MQRankSum=1.308;QD=14.37;ReadPosRankSum=3.271;VQSLOD=2.4957;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:42,0:43:5.47:204,0,5	1/1:9,0:10:17.53:171,18,0	0/0:25,0:13:39.10:0,39,499	0/0:37,0:20:42.92:0,43,513	1/1:26,0:26:35.52:325,36,0	0/1:22,0:22:5.67:176,0,6	1/1:21,0:21:32.46:366,32,0	0/0:39,0:39:58.80:0,59,806	1/1:24,2:27:39.67:498,40,0	1/1:33,1:36:13.95:955,14,0	1/1:20,1:21:5.16:38,5,0	1/1:30,6:39:63.46:1115,63,0	1/1:15,0:16:17.39:208,17,0	1/1:19,0:19:23.10:165,23,0	1/1:20,0:25:13.49:164,13,0	1/1:22,2:26:1.34:302,1,0	0/0:29,0:29:23.79:0,24,516	0/0:12,0:12:11.87:0,12,206	0/0:18,0:18:28.98:0,29,508	0/0:33,0:33:58.43:0,58,647	0/0:37,0:37:20.47:0,20,446	0/1:22,1:23:1.27:175,0,1	1/1:26,0:26:26.31:221,26,0	1/1:26,2:28:4.72:97,5,0	1/1:20,1:23:38.77:439,39,0	0/1:23,0:24:22.81:549,0,23	1/1:21,1:23:45.72:569,46,0	0/1:7,1:8:18.35:319,0,18
chr10	24902593	.	T	TC	2349.80	PASS	AB=0.856;AC=22;AF=0.393;AN=56;BaseQRankSum=2.423;DP=726;FS=91.571;HRun=0;HaplotypeScore=237.8693;InbreedingCoeff=-0.3355;MQ=51.24;MQ0=6;MQRankSum=2.707;QD=4.75;ReadPosRankSum=8.486;VQSLOD=-0.3143;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:35,10:46:99:115,0,121	1/1:7,3:10:15.41:107,15,0	0/0:25,0:13:39.11:0,39,509	0/0:37,0:20:44.07:0,44,492	1/1:22,4:26:35.49:253,35,0	0/1:20,2:21:71.98:74,0,72	0/1:22,2:22:35.50:124,0,35	0/0:38,0:38:96.72:0,97,1084	0/1:23,4:27:29.39:197,0,29	0/1:31,6:36:99:445,0,162	0/1:19,2:21:7.98:8,0,36	0/1:31,8:39:60.28:243,0,60	0/1:10,6:16:46.06:46,0,69	0/1:15,4:19:16.45:113,0,16	0/1:23,2:25:8.61:9,0,110	0/1:22,4:25:64.26:64,0,132	0/0:29,0:29:28.12:0,28,147	0/0:12,0:12:13.68:0,14,87	0/0:18,0:18:47.23:0,47,335	0/0:33,0:33:57.99:0,58,242	0/0:39,0:39:29.25:0,29,150	0/1:16,7:23:93.81:94,0,139	0/1:23,5:28:55.18:100,0,55	0/1:23,5:28:16.63:17,0,54	0/1:21,3:24:91.48:91,0,123	0/1:21,3:24:99:238,0,170	0/1:18,5:23:99:122,0,141	0/1:6,1:7:32.33:61,0,32
chr10	24903608	.	ATG	A	12756.69	PASS	AB=0.519;AC=35;AF=0.625;AN=56;BaseQRankSum=20.806;DP=712;FS=18.215;HRun=0;HaplotypeScore=200.7864;InbreedingCoeff=0.9227;MQ=85.74;MQ0=0;MQRankSum=-13.454;QD=31.19;ReadPosRankSum=5.991;VQSLOD=4.1711;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,114,2272	1/1:0,8:8:24.07:285,24,0	0/0:27,0:27:77.82:0,78,1381	0/0:32,0:32:72.27:0,72,1636	1/1:0,27:31:62.77:756,63,0	1/1:1,21:22:57.97:681,58,0	1/1:3,20:23:58.86:613,59,0	0/0:48,0:48:99:0,144,2798	0/1:1,12:14:21.81:414,0,22	1/1:0,34:37:99:1321,102,0	1/1:0,20:21:52.48:593,52,0	1/1:1,22:23:66.20:796,66,0	1/1:3,22:26:63.24:801,63,0	1/1:2,26:28:81.04:898,81,0	0/0:37,0:37:99:0,111,2172	1/1:2,31:33:96.26:1147,96,0	0/0:24,0:24:72.25:0,72,1459	0/0:11,0:10:30.10:0,30,608	0/0:17,0:16:48.14:0,48,882	0/0:33,0:33:99:0,99,1913	0/0:35,0:35:99:0,105,1995	1/1:0,18:20:48.14:572,48,0	1/1:4,20:25:60.73:675,61,0	1/1:1,14:15:33.99:405,34,0	1/1:1,18:19:51.15:619,51,0	1/1:1,22:23:69.19:861,69,0	1/1:1,33:34:93.27:1117,93,0	1/1:1,6:7:18.05:203,18,0
chr10	24903613	.	GA	G	10479.69	PASS	AB=0.538;AC=35;AF=0.625;AN=56;BaseQRankSum=20.817;DP=701;FS=9.386;HRun=2;HaplotypeScore=196.4150;InbreedingCoeff=0.9477;MQ=87.03;MQ0=0;MQRankSum=-11.911;QD=26.20;ReadPosRankSum=5.206;VQSLOD=3.3371;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,1:39:96.42:0,96,1613	1/1:0,8:8:24.03:229,24,0	0/0:27,0:27:72.24:0,72,1049	0/0:32,0:33:96.26:0,96,1344	1/1:4,27:31:65.93:631,66,0	1/1:1,21:22:62.51:586,63,0	1/1:0,20:20:53.78:461,54,0	0/0:45,0:45:99:0,132,1960	0/1:2,12:14:2.90:362,0,3	1/1:3,34:37:99:1111,102,0	1/1:2,20:22:52.50:519,52,0	1/1:1,22:23:69.09:667,69,0	1/1:2,22:24:63.01:625,63,0	1/1:2,26:28:80.36:740,80,0	0/0:38,0:38:99:0,111,1606	1/1:0,31:31:93.08:906,93,0	0/0:22,0:22:66.22:0,66,986	0/0:12,0:11:27.09:0,27,404	0/0:17,0:16:48.16:0,48,718	0/0:31,0:31:90.21:0,90,1246	0/0:37,0:37:99:0,104,1511	1/1:1,19:20:50.96:476,51,0	1/1:3,20:23:61.38:532,61,0	1/1:0,14:14:35.76:342,36,0	1/1:0,18:18:48.06:466,48,0	1/1:4,22:26:78.08:782,78,0	1/1:0,33:33:93.01:884,93,0	1/1:0,6:6:18.01:161,18,0
chr10	24904145	.	TA	T	19887.19	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=3.085;DP=531;FS=11.489;HRun=1;HaplotypeScore=94.1141;InbreedingCoeff=0.9984;MQ=77.27;MQ0=3;MQRankSum=-7.763;QD=39.07;ReadPosRankSum=5.332;VQSLOD=4.2556;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,25:25:72.24:1005,72,0	1/1:0,10:11:33.09:443,33,0	0/0:12,0:12:36.08:0,36,531	0/0:10,0:10:27.03:0,27,351	1/1:0,21:21:57.19:796,57,0	1/1:0,19:19:57.17:778,57,0	1/1:0,10:10:30.10:419,30,0	1/1:0,23:24:69.15:903,69,0	1/1:0,22:22:54.16:736,54,0	1/1:0,20:20:60.11:810,60,0	1/1:0,17:17:48.16:671,48,0	1/1:0,18:18:54.18:754,54,0	1/1:0,19:19:51.17:712,51,0	1/1:0,22:22:63.21:881,63,0	1/1:0,21:21:60.20:838,60,0	1/1:0,16:17:48.12:633,48,0	1/1:0,17:17:48.16:671,48,0	1/1:0,13:13:33.11:460,33,0	1/1:0,20:20:60.15:800,60,0	1/1:0,27:27:72.24:1004,72,0	1/1:0,21:21:63.21:881,63,0	1/1:0,10:10:30.10:419,30,0	1/1:0,12:12:33.09:461,33,0	1/1:0,14:14:39.13:545,39,0	1/1:0,25:24:72.24:1005,72,0	1/1:0,37:37:99:1516,111,0	1/1:0,31:31:93.29:1279,93,0	1/1:0,12:12:36.09:468,36,0
chr10	24904357	.	TTA	T	15654.74	PASS	AB=1.000;AC=51;AF=0.911;AN=56;BaseQRankSum=1.066;DP=522;FS=0.000;HRun=0;HaplotypeScore=112.3214;InbreedingCoeff=0.7155;MQ=63.34;MQ0=4;MQRankSum=0.521;QD=31.82;ReadPosRankSum=3.895;VQSLOD=6.7578;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,21:22:26.26:710,26,0	1/1:0,11:11:30.10:459,30,0	0/0:17,0:8:20.09:0,20,293	0/0:13,0:8:11.85:0,12,119	1/1:0,32:32:96.08:1314,96,0	1/1:0,18:18:48.16:735,48,0	1/1:0,12:12:36.12:550,36,0	1/1:22,0:21:26.16:70,26,0	1/1:0,24:24:63.21:963,63,0	1/1:0,27:27:80.85:1183,81,0	1/1:0,15:15:42.10:615,42,0	1/1:0,12:12:30.10:459,30,0	1/1:0,15:15:45.15:689,45,0	1/1:0,18:18:51.17:777,51,0	1/1:1,20:21:57.19:872,57,0	1/1:1,21:22:57.18:873,57,0	1/1:21,0:21:26.43:71,26,0	0/1:23,0:23:20.46:51,0,20	1/1:22,0:20:31.62:152,32,0	1/1:26,0:26:35.76:96,36,0	1/1:3,0:3:3.11:8,3,0	1/1:1,6:6:18.06:275,18,0	1/1:0,14:14:39.13:597,39,0	1/1:2,5:7:21.05:281,21,0	1/1:1,21:22:60.20:919,60,0	1/1:1,33:34:99:1469,99,0	1/1:3,26:29:63.21:963,63,0	1/1:1,12:12:33.11:505,33,0
chr10	24904358	.	TA	T	9328.54	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=2.508;DP=513;FS=0.000;HRun=1;HaplotypeScore=122.3252;InbreedingCoeff=0.9283;MQ=62.40;MQ0=4;MQRankSum=0.530;QD=19.35;ReadPosRankSum=3.968;VQSLOD=5.1054;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:22:33.82:230,34,0	1/1:11,0:11:28.75:153,29,0	0/0:15,0:7:21.06:0,21,274	0/0:15,0:9:14.87:0,15,135	1/1:32,0:32:92.56:518,93,0	1/1:18,0:18:46:245,46,0	1/1:12,0:12:34.50:183,35,0	1/1:0,22:21:60.15:783,60,0	1/1:24,0:24:60.40:321,60,0	1/1:27,0:27:77.57:424,78,0	1/1:15,0:15:40.31:217,40,0	1/1:12,0:12:28.75:153,29,0	1/1:15,0:15:43.13:230,43,0	1/1:18,0:18:48.77:257,49,0	1/1:20,0:20:54.63:290,55,0	1/1:21,0:21:54.60:291,55,0	1/1:0,21:21:51.17:712,51,0	1/1:1,21:22:21.43:816,21,0	1/1:1,20:19:57.11:704,57,0	1/1:0,25:25:72.20:984,72,0	1/1:0,3:3:6.02:84,6,0	1/1:7,0:6:17.25:92,17,0	1/1:14,0:14:37.38:199,37,0	1/1:7,0:7:20.37:128,20,0	1/1:21,0:21:57.53:307,58,0	1/1:33,0:33:95.05:520,95,0	1/1:26,0:25:60.38:320,60,0	1/1:13,0:12:31.63:168,32,0
chr10	24904532	.	GGC	G	19002.83	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=8.960;DP=639;FS=1.416;HRun=0;HaplotypeScore=90.8856;InbreedingCoeff=0.9971;MQ=65.88;MQ0=1;MQRankSum=-0.033;QD=43.79;ReadPosRankSum=6.626;VQSLOD=6.2256;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,40:40:99:1614,99,0	1/1:0,19:19:51.65:832,52,0	0/0:30,0:24:72.20:0,72,1270	0/0:32,0:29:50.34:0,50,1365	1/1:0,29:29:84.29:1361,84,0	1/1:0,24:24:60.20:979,60,0	1/1:0,29:29:75.26:1223,75,0	0/0:25,0:25:75.24:0,75,1447	1/1:1,27:28:81.28:1320,81,0	1/1:1,26:27:81.27:1288,81,0	1/1:0,14:14:39.13:636,39,0	1/1:0,19:19:45.15:734,45,0	1/1:0,25:25:72.25:1164,72,0	1/1:0,20:20:60.20:978,60,0	1/1:0,28:28:69.24:1126,69,0	1/1:0,21:21:51.17:832,51,0	0/0:38,0:38:99:0,114,2271	0/0:18,0:18:54.19:0,54,1089	0/0:14,0:12:27.09:0,27,548	0/0:16,0:16:45.15:0,45,901	0/0:32,0:32:93.30:0,93,1828	1/1:0,15:15:45.15:734,45,0	1/1:0,14:14:36.12:587,36,0	1/1:0,22:22:54.18:881,54,0	1/1:0,19:19:51.17:832,51,0	1/1:0,18:18:54.17:857,54,0	1/1:0,18:18:48.16:782,48,0	1/1:0,5:5:15.05:245,15,0
chr10	24905542	.	GA	G	17559.09	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-1.144;DP=695;FS=0.000;HRun=7;HaplotypeScore=160.2221;InbreedingCoeff=0.9946;MQ=76.20;MQ0=0;MQRankSum=-7.927;QD=26.40;ReadPosRankSum=5.254;VQSLOD=2.7559;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,36:37:87.20:887,87,0	1/1:0,14:14:42.10:428,42,0	0/0:18,0:18:26.43:0,26,400	0/0:12,0:12:26.56:0,27,286	1/1:2,40:42:99:1162,114,0	1/1:1,34:35:96.22:979,96,0	1/1:3,18:21:48.10:490,48,0	1/1:1,22:23:66.09:646,66,0	1/1:0,25:25:63.14:642,63,0	1/1:4,27:31:81.18:826,81,0	1/1:0,21:21:63.14:641,63,0	1/1:0,30:30:81.18:826,81,0	1/1:1,27:28:75.17:765,75,0	1/1:6,27:33:72.16:734,72,0	1/1:3,24:27:60.13:612,60,0	1/1:4,20:24:57.13:582,57,0	1/1:2,30:32:84.19:857,84,0	1/1:5,8:13:24.05:245,24,0	1/1:4,25:29:75.17:765,75,0	1/1:1,26:27:78.18:795,78,0	1/1:1,17:18:45.10:459,45,0	1/1:1,19:20:57.13:581,57,0	1/1:0,32:32:90.20:915,90,0	1/1:0,11:11:24.05:245,24,0	1/1:1,19:20:54.12:551,54,0	1/1:3,28:31:87.19:886,87,0	1/1:3,31:34:81.18:826,81,0	1/1:0,7:7:21.05:214,21,0
chr10	24905727	.	AG	A	632.48	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=-2.786;DP=676;FS=6.868;HRun=1;HaplotypeScore=178.1226;InbreedingCoeff=0.6781;MQ=82.96;MQ0=0;MQRankSum=-3.429;QD=11.71;ReadPosRankSum=-0.517;VQSLOD=1.6428;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,32:34:86.54:726,87,0	0/0:4,0:4:8.59:0,9,44	0/0:19,0:19:54.16:0,54,807	0/1:20,0:20:4.89:5,0,568	0/0:23,0:23:62.05:0,62,306	0/0:31,0:31:76.31:0,76,378	0/0:23,0:23:57.71:0,58,312	0/0:30,0:30:73.56:0,74,420	0/0:28,0:28:77.08:0,77,389	0/0:25,0:25:69.91:0,70,425	0/0:26,0:26:68.36:0,68,342	0/0:33,0:33:84.93:0,85,428	0/0:30,0:30:74.29:0,74,382	0/0:24,0:24:54.13:0,54,269	0/0:27,0:27:67.48:0,67,332	0/0:22,0:22:53.51:0,54,269	0/0:24,0:24:65.36:0,65,325	0/0:12,0:12:27.27:0,27,123	0/0:25,0:25:68.74:0,69,361	0/0:28,0:28:71.33:0,71,362	0/0:30,0:30:71.36:0,71,360	0/0:19,0:19:50.62:0,51,249	0/0:13,0:13:37.01:0,37,185	0/0:22,0:22:57.05:0,57,287	0/0:27,0:27:77.15:0,77,400	0/0:23,0:23:66.86:0,67,384	0/0:41,0:41:99:0,104,504	0/0:13,0:13:32.55:0,33,146
chr10	24905728	.	GCA	G	27885.34	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-4.555;DP=667;FS=1.415;HRun=0;HaplotypeScore=92.8204;InbreedingCoeff=0.9703;MQ=83.35;MQ0=0;MQRankSum=-9.626;QD=44.40;ReadPosRankSum=5.830;VQSLOD=6.3117;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:34,0:34:84.26:1251,84,0	1/1:0,4:4:9.03:147,9,0	0/0:20,0:20:53.67:0,54,965	0/0:19,0:19:32.74:0,33,710	1/1:0,23:23:66.23:1077,66,0	1/1:0,31:31:81.28:1322,81,0	1/1:0,22:22:57.19:930,57,0	1/1:0,28:28:81.26:1267,81,0	1/1:0,28:28:81.28:1322,81,0	1/1:0,25:25:69.21:1095,69,0	1/1:0,26:26:72.25:1175,72,0	1/1:0,32:32:90.31:1464,90,0	1/1:0,28:28:75.26:1224,75,0	1/1:0,23:23:60.20:978,60,0	1/1:0,27:27:72.25:1164,72,0	1/1:0,22:22:57.19:926,57,0	1/1:0,24:24:69.24:1126,69,0	1/1:0,12:12:30.10:486,30,0	1/1:0,25:25:75.26:1211,75,0	1/1:1,26:27:75.26:1214,75,0	1/1:1,29:30:75.26:1224,75,0	1/1:0,19:19:54.18:881,54,0	1/1:0,13:13:39.13:636,39,0	1/1:0,22:22:60.20:979,60,0	1/1:0,27:27:81.28:1322,81,0	1/1:0,22:22:66.23:1074,66,0	1/1:0,40:41:99:1805,111,0	1/1:0,13:13:36.12:587,36,0
chr10	24905729	.	CA	C	4443.89	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=4.234;DP=666;FS=3.222;HRun=1;HaplotypeScore=163.3372;InbreedingCoeff=0.8961;MQ=83.38;MQ0=0;MQRankSum=-9.606;QD=7.09;ReadPosRankSum=6.005;VQSLOD=2.1572;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,32:33:83.58:706,84,0	1/1:4,0:4:6.66:21,7,0	0/0:20,0:20:53.85:0,54,787	0/0:19,0:19:6.06:0,6,596	1/1:23,0:23:48.84:154,49,0	1/1:31,0:31:59.95:189,60,0	1/1:22,0:22:42.18:133,42,0	1/1:28,0:28:50.34:155,50,0	1/1:28,0:28:59.95:189,60,0	1/1:25,0:25:48.18:150,48,0	1/1:26,0:26:53.28:168,53,0	1/1:32,0:32:65.63:206,66,0	1/1:28,0:28:55.51:175,56,0	1/1:23,0:23:44.40:140,44,0	1/1:27,0:27:50.36:157,50,0	1/1:22,0:22:41.21:129,41,0	1/1:24,0:24:51.06:161,51,0	1/1:12,0:12:21.23:66,21,0	1/1:25,0:25:52.40:163,52,0	1/1:26,0:27:54.53:171,55,0	1/1:30,0:30:55.36:174,55,0	1/1:19,0:19:39.96:126,40,0	1/1:13,0:13:28.86:91,29,0	1/1:22,0:22:44.40:140,44,0	1/1:27,0:27:59.95:189,60,0	1/1:22,0:22:48.04:150,48,0	1/1:41,0:41:82.15:259,82,0	1/1:13,0:13:26.64:84,27,0
chr10	24906159	.	A	AG	26861.23	PASS	AB=1.000;AC=53;AF=0.946;AN=56;BaseQRankSum=-3.703;DP=655;FS=0.000;HRun=3;HaplotypeScore=107.1406;InbreedingCoeff=0.6496;MQ=78.02;MQ0=0;MQRankSum=-9.694;QD=42.17;ReadPosRankSum=7.389;VQSLOD=2.7662;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,27:28:72.25:1151,72,0	1/1:0,10:10:30.10:480,30,0	0/1:31,0:30:13.70:14,0,879	0/0:18,0:17:14.38:0,14,535	1/1:0,27:27:75.25:1185,75,0	1/1:0,24:24:69.24:1103,69,0	1/1:0,18:17:51.17:810,51,0	1/1:2,30:32:93.30:1450,93,0	1/1:0,28:28:78.27:1247,78,0	1/1:1,26:27:78.25:1220,78,0	1/1:0,22:22:63.21:1005,63,0	1/1:0,14:14:36.12:576,36,0	1/1:1,15:16:45.15:709,45,0	1/1:0,21:21:57.19:911,57,0	1/1:0,28:28:78.27:1247,78,0	1/1:0,16:16:36.12:576,36,0	1/1:0,24:24:69.24:1103,69,0	1/1:0,9:9:27.09:431,27,0	1/1:3,19:22:63.21:989,63,0	1/1:2,29:30:90.31:1439,90,0	1/1:0,27:27:75.26:1199,75,0	1/1:1,31:32:87.30:1391,87,0	1/1:2,25:27:75.26:1199,75,0	1/1:0,23:23:63.21:1007,63,0	1/1:1,15:16:42.14:672,42,0	1/1:2,26:28:81.23:1268,81,0	1/1:1,40:41:99:1813,114,0	1/1:0,14:14:42.14:668,42,0
chr10	24907001	.	G	GAGCTGATTGTAGAGAGAATTAGTAAA	2458.01	PASS	AB=0.611;AC=16;AF=0.889;AN=18;BaseQRankSum=-0.180;DP=31;FS=15.441;HRun=0;HaplotypeScore=34.6604;MQ=155.67;MQ0=0;MQRankSum=-0.300;QD=117.05;ReadPosRankSum=-0.419;VQSLOD=1.4324;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/1:1,0:5:4.77:954,0,5	0/1:3,1:6:13.28:1087,0,13	1/1:1,0:1:3.01:50,3,0	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	1/1:2,0:2:6.01:104,6,0	./.	1/1:1,0:1:3.01:72,3,0	./.	1/1:1,0:1:3.01:50,3,0	./.	./.	1/1:2,0:2:6:54,6,0	1/1:1,0:1:3:25,3,0	1/1:2,0:2:6.02:142,6,0
chr10	24908173	.	TA	T	10585.58	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=2.655;DP=428;FS=0.000;HRun=8;HaplotypeScore=80.8061;InbreedingCoeff=0.9833;MQ=68.83;MQ0=0;MQRankSum=-5.990;QD=25.82;ReadPosRankSum=2.517;VQSLOD=5.4652;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,15:15:45.07:434,45,0	1/1:0,7:7:21.03:203,21,0	0/0:9,0:9:18.05:0,18,214	0/0:9,0:9:21.06:0,21,247	1/1:3,28:31:72.11:693,72,0	1/1:1,15:16:45.07:434,45,0	1/1:1,11:12:30.05:290,30,0	1/1:5,16:21:48.07:463,48,0	1/1:0,9:9:26.99:251,27,0	1/1:0,18:18:54.05:512,54,0	1/1:1,10:11:30.05:288,30,0	1/1:0,19:19:54.09:521,54,0	1/1:2,15:17:48.05:455,48,0	1/1:0,14:14:42.07:405,42,0	1/1:1,16:17:48.07:462,48,0	1/1:1,13:14:36.06:347,36,0	1/1:0,12:12:33.05:318,33,0	1/1:1,5:6:18.01:167,18,0	1/1:1,22:23:60.05:573,60,0	1/1:4,21:25:45.83:560,46,0	1/1:1,10:11:27.04:261,27,0	1/1:3,9:12:24.04:232,24,0	1/1:0,16:16:45.07:434,45,0	1/1:0,9:9:24.03:232,24,0	1/1:1,15:16:45.07:434,45,0	1/1:2,17:19:51.07:487,51,0	1/1:0,30:30:87.14:840,87,0	1/1:0,10:10:30.05:290,30,0
chr10	24908256	.	C	CAAA	10067.07	PASS	AB=1.000;AC=38;AF=0.679;AN=56;BaseQRankSum=-8.097;DP=454;FS=16.637;HRun=5;HaplotypeScore=114.3414;InbreedingCoeff=0.8133;MQ=71.62;MQ0=0;MQRankSum=-2.641;QD=32.27;ReadPosRankSum=-3.256;VQSLOD=1.4928;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:32.56:0,33,278	1/1:3,1:4:9.03:144,9,0	0/0:10,0:10:8.01:0,8,170	0/0:8,0:8:15.05:0,15,221	1/1:12,9:22:52.36:864,52,0	1/1:8,4:12:33.03:471,33,0	1/1:2,12:15:27.09:518,27,0	0/1:32,0:32:13.06:13,0,231	1/1:6,5:11:30.56:526,31,0	1/1:11,6:20:49.38:715,49,0	1/1:8,5:13:26.53:386,27,0	1/1:8,7:16:37:662,37,0	1/1:9,7:20:44.94:794,45,0	1/1:8,2:10:21.07:374,21,0	0/0:29,0:29:36.34:0,36,421	1/1:7,9:19:42.60:739,43,0	0/0:27,0:27:35.10:0,35,207	0/0:14,0:14:32.87:0,33,140	0/0:17,0:17:42.93:0,43,186	0/0:18,0:19:35.23:0,35,150	0/1:13,0:13:33.96:34,0,90	1/1:7,5:14:30.06:456,30,0	1/1:10,11:21:59.92:900,60,0	1/1:6,2:9:14.83:194,15,0	1/1:7,4:12:27.02:380,27,0	1/1:14,6:21:46.01:745,46,0	1/1:10,6:16:39.08:615,39,0	1/1:0,10:11:27.09:538,27,0
chr10	24908261	.	AT	A	8050.93	PASS	AB=0.975;AC=50;AF=0.893;AN=56;BaseQRankSum=0.773;DP=455;FS=0.588;HRun=1;HaplotypeScore=95.6387;InbreedingCoeff=0.3300;MQ=71.63;MQ0=0;MQRankSum=-0.748;QD=18.05;ReadPosRankSum=-3.676;VQSLOD=3.9447;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:17,0:17:26.47:26,0,72	0/1:4,0:4:3.68:32,0,4	0/1:8,1:9:5.57:6,0,123	0/0:9,0:9:15.03:0,15,214	1/1:21,0:21:42.32:220,42,0	1/1:13,0:13:31.21:205,31,0	1/1:15,0:15:29.64:204,30,0	1/1:0,34:34:99:1318,102,0	1/1:12,0:12:30.32:185,30,0	1/1:19,0:19:40.53:277,41,0	1/1:14,0:14:25.38:146,25,0	1/1:14,0:14:35.89:218,36,0	1/1:21,0:21:42.54:230,43,0	1/1:9,0:9:19.78:111,20,0	0/1:29,0:29:74.93:93,0,75	1/1:17,0:17:44:254,44,0	1/1:0,26:26:66.15:877,66,0	1/1:0,15:15:36.12:492,36,0	1/1:2,14:16:48.09:645,48,0	1/1:8,12:20:57.08:700,57,0	1/1:5,9:14:31.87:441,32,0	1/1:14,0:14:23.38:136,23,0	1/1:23,0:23:58.55:343,59,0	1/1:7,0:7:17.71:115,18,0	1/1:15,0:15:32.16:216,32,0	1/1:20,0:20:35.20:212,35,0	1/1:17,0:16:33.67:200,34,0	1/1:11,0:11:26.08:147,26,0
chr10	24908459	.	AT	A	2769.76	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-3.772;DP=541;FS=7.403;HRun=8;HaplotypeScore=169.0642;InbreedingCoeff=0.9892;MQ=71.79;MQ0=1;MQRankSum=0.239;QD=21.81;ReadPosRankSum=-2.051;VQSLOD=1.5264;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:42.10:0,42,483	0/0:11,0:11:27.08:0,27,322	0/0:9,0:8:10.83:0,11,101	0/0:15,0:15:27.01:0,27,283	0/0:35,0:35:93.26:0,93,1091	0/0:27,0:27:78.16:0,78,892	0/0:13,0:13:30.08:0,30,348	1/1:7,25:32:75.07:707,75,0	0/0:14,0:14:26.59:0,27,385	0/0:28,0:28:73.09:0,73,820	0/0:20,0:20:51.14:0,51,598	0/0:18,0:18:53.97:0,54,587	0/0:23,0:23:51.57:0,52,580	0/0:16,0:16:36.08:0,36,417	0/0:28,0:28:78.20:0,78,897	0/0:12,0:12:36.08:0,36,417	1/1:1,21:22:54.09:521,54,0	1/1:1,10:11:26.99:250,27,0	1/1:6,16:22:48.03:447,48,0	1/1:2,25:27:72.06:685,72,0	1/1:1,12:13:36.06:347,36,0	0/0:16,0:16:45.10:0,45,524	0/0:31,0:31:87.16:0,87,975	0/0:12,0:12:33.10:0,33,395	0/0:21,0:21:60.16:0,60,697	0/0:22,0:22:66.16:0,66,762	0/0:21,0:20:60.13:0,60,680	0/0:7,0:7:18.06:0,18,216
chr10	24910353	.	A	ATTGTTTTGTT	36016.61	PASS	AB=1.000;AC=51;AF=0.911;AN=56;BaseQRankSum=-3.619;DP=675;FS=1.720;HRun=0;HaplotypeScore=175.7763;InbreedingCoeff=0.6733;MQ=64.31;MQ0=1;MQRankSum=-7.156;QD=58.00;ReadPosRankSum=5.365;VQSLOD=4.6993;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:25:36.09:445,36,0	1/1:3,8:11:27.09:1240,27,0	0/0:26,0:24:4.15:0,4,273	0/1:28,0:17:2.09:2,0,443	1/1:24,13:38:48.16:1961,48,0	1/1:15,10:27:27.09:1348,27,0	1/1:15,2:17:21.07:1046,21,0	0/0:28,0:28:39.13:0,39,1099	1/1:14,7:22:42.14:1852,42,0	1/1:21,14:37:57.15:2058,57,0	1/1:24,8:34:51.13:2127,51,0	1/1:10,7:18:27.09:1302,27,0	1/1:22,8:30:57.20:2527,57,0	1/1:16,8:25:36.08:1654,36,0	1/1:17,0:25:24.08:985,24,0	1/1:13,9:24:36.12:1796,36,0	1/1:18,5:25:12.04:422,12,0	1/1:6,3:12:9.03:382,9,0	1/1:9,8:19:30.08:1201,30,0	1/1:15,15:31:45.15:2197,45,0	1/1:6,0:6:4.21:23,4,0	1/1:10,4:15:15.05:696,15,0	1/1:8,10:20:42.14:2010,42,0	1/1:11,3:14:18.06:883,18,0	1/1:21,12:35:33.11:1648,33,0	1/1:21,15:38:75.23:3445,75,0	1/1:21,14:35:54.19:2617,54,0	1/1:8,1:9:3.01:150,3,0
chr10	24911913	.	TGGG	T	18719.49	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-2.742;DP=594;FS=2.868;HRun=10;HaplotypeScore=127.5134;InbreedingCoeff=0.9085;MQ=62.88;MQ0=0;MQRankSum=-6.051;QD=35.66;ReadPosRankSum=4.231;VQSLOD=3.9396;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:33:68.76:0,69,571	1/1:1,7:8:21.07:287,21,0	0/0:20,0:21:4.31:0,4,384	0/0:14,0:14:27.08:0,27,455	1/1:2,20:22:54.16:723,54,0	1/1:2,16:18:45.15:614,45,0	1/1:2,13:15:33.10:450,33,0	1/1:4,13:17:36.10:491,36,0	1/1:1,16:17:48.15:655,48,0	1/1:2,37:39:99:1433,105,0	1/1:2,25:27:75.25:1017,75,0	1/1:0,20:20:60.20:813,60,0	1/1:4,21:25:63.20:859,63,0	1/1:3,31:34:93.30:1269,93,0	1/1:2,22:24:63.20:859,63,0	1/1:3,15:18:45.14:614,45,0	1/1:0,14:14:39.13:532,39,0	1/1:1,8:9:24.08:328,24,0	1/1:3,11:14:33.10:450,33,0	1/1:1,25:26:75.24:1018,75,0	1/1:0,14:14:42.14:573,42,0	1/1:1,26:27:72.24:982,72,0	1/1:2,23:25:63.68:855,64,0	1/1:2,15:17:38.86:531,39,0	1/1:2,32:34:93.31:1264,93,0	1/1:4,23:27:69.22:942,69,0	1/1:4,27:31:81.21:1079,81,0	1/1:1,2:3:6.01:82,6,0
chr10	24912040	.	A	AC	16360.33	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-4.504;DP=432;FS=18.519;HRun=0;HaplotypeScore=68.8293;InbreedingCoeff=0.9281;MQ=75.15;MQ0=0;MQRankSum=-9.134;QD=41.42;ReadPosRankSum=2.953;VQSLOD=3.2107;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,7:7:15.05:239,15,0	1/1:1,5:6:12.04:191,12,0	0/0:16,0:14:48.14:0,48,640	0/0:21,0:9:51.17:0,51,713	1/1:0,21:21:49.50:777,49,0	1/1:0,21:21:60.18:952,60,0	1/1:1,11:12:27.09:430,27,0	1/1:1,20:21:60.20:957,60,0	1/1:0,10:10:30.10:477,30,0	1/1:1,25:26:78.25:1221,78,0	1/1:0,20:20:57.19:906,57,0	1/1:1,8:9:24.08:381,24,0	1/1:0,20:20:57.19:907,57,0	1/1:1,9:10:21.05:310,21,0	1/1:1,14:15:36.12:572,36,0	1/1:0,11:11:30.10:477,30,0	1/1:2,11:13:30.10:477,30,0	1/1:0,4:4:12.04:191,12,0	1/1:1,16:17:48.15:729,48,0	1/1:2,21:23:63.21:1002,63,0	1/1:0,5:5:12.04:191,12,0	1/1:0,22:22:66.22:1039,66,0	1/1:0,19:19:45.13:711,45,0	1/1:1,6:7:15.05:239,15,0	1/1:3,18:21:41.82:668,42,0	1/1:0,23:23:63.10:983,63,0	1/1:0,27:27:69.24:1095,69,0	1/1:0,5:5:15.05:239,15,0
chr10	24913770	.	ACACACACACG	A	9514.75	PASS	AB=1.000;AC=39;AF=0.750;AN=52;BaseQRankSum=11.761;DP=690;FS=1.637;HRun=0;HaplotypeScore=228.2321;InbreedingCoeff=0.8204;MQ=56.34;MQ0=13;MQRankSum=-9.711;QD=21.92;ReadPosRankSum=1.998;VQSLOD=4.0583;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:43:61.67:0,62,2676	1/1:2,5:7:9.01:188,9,0	./.	./.	1/1:16,13:29:6.02:178,6,0	1/1:20,12:31:15.05:413,15,0	1/1:21,5:25:5.75:160,6,0	0/0:22,0:21:15.04:0,15,296	1/1:10,15:25:24.08:695,24,0	1/1:13,9:22:30.09:731,30,0	1/1:6,10:16:15.05:424,15,0	1/1:12,15:27:24.08:680,24,0	1/1:9,14:23:20.82:560,21,0	1/1:11,14:25:30.10:843,30,0	1/1:9,13:22:23.95:665,24,0	1/1:7,9:15:18.06:488,18,0	0/0:26,0:25:30.10:0,30,1186	0/1:22,0:22:1.92:2,0,1412	0/0:17,0:15:24.08:0,24,945	0/0:39,0:39:72.25:0,72,2796	0/0:41,0:39:63.22:0,63,2440	1/1:10,9:19:12.04:355,12,0	1/1:7,12:19:8.78:266,9,0	1/1:15,7:21:9.03:216,9,0	1/1:8,12:20:27.09:766,27,0	1/1:11,14:25:45.10:977,45,0	1/1:8,19:27:29.31:887,29,0	1/1:9,0:8:2.98:22,3,0
chr10	24914766	.	AAG	A	1165.76	PASS	AB=0.989;AC=29;AF=0.518;AN=56;BaseQRankSum=7.433;DP=461;FS=4.698;HRun=0;HaplotypeScore=140.1524;InbreedingCoeff=-0.5577;MQ=48.37;MQ0=16;MQRankSum=1.827;QD=2.63;ReadPosRankSum=1.924;VQSLOD=2.2117;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:21:24.97:25,0,321	0/1:10,0:10:6.54:18,0,7	0/1:18,0:7:12.29:12,0,21	0/1:18,0:7:3.79:4,0,7	0/1:25,0:23:8.74:58,0,9	1/1:11,0:10:10.16:32,10,0	0/0:14,0:11:1.57:0,2,72	0/1:20,1:18:32.80:52,0,33	0/1:13,0:13:28.33:28,0,44	0/1:20,0:19:32.58:41,0,33	1/1:21,0:21:6.15:63,6,0	1/1:16,1:16:8.46:116,8,0	0/1:12,0:11:5.29:18,0,5	0/1:11,0:10:7.50:8,0,55	0/1:12,0:12:5.60:88,0,6	0/1:18,0:17:13.21:33,0,13	0/1:21,3:22:99:140,0,109	0/1:7,0:6:6.54:7,0,31	0/1:22,0:20:26.70:114,0,27	0/1:18,2:20:2.79:137,0,3	0/1:16,0:15:4.93:10,0,5	0/1:12,0:12:7.18:56,0,7	0/1:16,0:16:37.30:37,0,46	0/1:21,0:20:14.53:61,0,15	0/1:15,0:14:11.25:46,0,11	0/1:23,0:21:36:36,0,41	0/1:18,0:18:46.92:73,0,47	0/0:4,0:2:2.90:0,3,20
chr10	24914768	.	GAA	G	6032.83	PASS	AB=1.000;AC=49;AF=0.907;AN=54;BaseQRankSum=0.748;DP=461;FS=24.543;HRun=15;HaplotypeScore=127.7882;InbreedingCoeff=0.5541;MQ=48.54;MQ0=16;MQRankSum=-0.426;QD=14.54;ReadPosRankSum=4.879;VQSLOD=1.8964;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:24:47.82:0,48,499	1/1:3,7:10:17.51:157,18,0	0/1:19,0:7:14.16:14,0,54	0/0:18,0:7:1.35:0,1,32	1/1:6,20:24:53.24:470,53,0	1/1:1,10:10:29.99:264,30,0	1/1:8,6:11:8.83:79,9,0	1/1:8,11:16:33.76:262,34,0	1/1:5,7:12:23.85:199,24,0	1/1:6,12:17:32.59:288,33,0	1/1:3,18:21:45.74:416,46,0	1/1:4,13:16:41.96:363,42,0	1/1:2,10:11:26.99:237,27,0	1/1:5,6:10:17.72:158,18,0	1/1:9,2:12:22.96:139,23,0	1/1:3,14:16:35.91:315,36,0	1/1:21,3:22:15.54:205,16,0	1/1:3,4:6:8.99:79,9,0	1/1:11,11:21:5.06:254,5,0	1/1:12,7:20:19.30:224,19,0	1/1:5,10:15:11.84:94,12,0	1/1:2,10:12:29.93:257,30,0	1/1:5,12:17:29.81:261,30,0	1/1:6,16:21:7.13:320,7,0	1/1:5,11:15:30.57:281,31,0	1/1:6,15:19:44.52:394,45,0	1/1:8,10:18:34.84:301,35,0	./.
chr10	24914782	.	AAG	A	723.75	PASS	AB=0.988;AC=28;AF=0.500;AN=56;BaseQRankSum=6.217;DP=486;FS=0.443;HRun=0;HaplotypeScore=157.5727;InbreedingCoeff=-0.3411;MQ=54.53;MQ0=9;MQRankSum=-3.728;QD=1.83;ReadPosRankSum=9.519;VQSLOD=1.1000;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:24:37.59:0,38,492	0/1:9,0:9:14.29:14,0,34	0/0:33,0:13:23.07:0,23,194	0/0:28,0:14:38.22:0,38,251	0/1:28,0:26:44.72:45,0,92	0/1:12,0:11:12.08:16,0,12	0/1:10,0:9:0.94:1,0,62	0/1:21,0:21:0.19:0,0,163	1/1:8,0:8:16.05:82,16,0	0/1:22,0:21:19.61:20,0,145	1/1:19,0:19:6.49:52,6,0	0/1:19,0:18:26.61:27,0,47	0/1:16,0:15:21.63:22,0,92	0/1:8,0:8:23.14:31,0,23	0/1:13,1:14:61.17:79,0,61	0/1:16,0:16:26.59:30,0,27	0/1:16,1:16:24.66:25,0,79	1/1:7,0:6:10.42:39,10,0	0/1:28,2:28:56.51:57,0,146	0/1:19,1:20:36.85:37,0,44	0/1:14,0:13:10.63:11,0,23	0/1:11,0:11:0.32:57,0,0	0/1:16,0:16:35.48:35,0,59	0/1:25,0:24:59.55:60,0,99	0/1:20,0:20:35.98:36,0,107	0/1:21,0:21:24.04:24,0,96	1/1:13,0:13:21.40:89,21,0	0/0:3,0:3:8.88:0,9,57
chr10	24914804	.	T	TAC	601.87	PASS	AB=0.983;AC=22;AF=0.440;AN=50;BaseQRankSum=-0.424;DP=529;FS=6.745;HRun=0;HaplotypeScore=184.2442;InbreedingCoeff=0.0085;MQ=52.13;MQ0=12;MQRankSum=0.462;QD=2.10;ReadPosRankSum=-0.182;VQSLOD=2.1702;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:17:2.80:13,3,0	0/1:10,0:10:4.99:5,0,10	./.	./.	0/1:33,0:31:33.94:34,0,40	0/1:16,0:15:6.33:30,0,6	1/1:13,0:10:3.46:25,3,0	./.	0/1:12,0:11:10.75:12,0,11	0/0:24,0:24:1.31:0,1,46	0/0:23,0:23:2.84:0,3,14	0/1:17,0:16:1.03:1,0,15	0/1:18,0:18:11.66:12,0,80	1/1:12,2:14:5.93:72,6,0	0/1:13,1:14:49.72:118,0,50	0/0:21,0:21:2.35:0,2,21	0/0:17,0:20:9.73:0,10,41	0/0:2,0:4:5.68:0,6,28	0/0:11,0:17:1.01:0,1,31	0/0:12,0:16:2.98:0,3,21	0/1:16,0:18:0:0,0,0	0/0:20,0:20:4.90:0,5,24	0/0:20,0:19:5.52:0,6,19	0/1:30,0:30:10.88:11,0,68	1/1:26,1:28:11.08:134,11,0	0/1:23,3:25:37.39:206,0,37	1/1:11,1:12:2.84:14,3,0	1/1:4,2:5:5.38:53,5,0
chr10	24914854	.	CACACACACAT	C	1702.53	PASS	AB=0.998;AC=20;AF=0.357;AN=56;BaseQRankSum=3.349;DP=623;FS=7.460;HRun=0;HaplotypeScore=194.4527;InbreedingCoeff=-0.2275;MQ=48.96;MQ0=55;MQRankSum=2.806;QD=4.43;ReadPosRankSum=-1.469;VQSLOD=1.1943;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,13:19:2.24:8,2,0	0/1:8,0:8:13.24:13,0,197	0/0:26,0:5:0.47:0,0,277	0/1:27,0:6:18.51:19,0,121	0/1:36,0:33:99:296,0,620	0/1:20,0:17:99:387,0,313	1/1:15,0:13:3:27,3,0	0/1:29,0:19:2.01:2,0,323	0/0:13,0:12:3.01:0,3,146	0/1:29,0:23:99:285,0,359	0/1:19,0:19:99:194,0,116	0/0:21,0:20:12.04:0,12,326	0/0:20,0:18:24.26:0,24,691	0/0:15,0:14:6.23:0,6,172	0/0:12,0:12:14.98:0,15,551	0/1:21,0:21:99:165,0,413	0/0:27,0:27:48.10:0,48,1788	0/0:13,0:11:9.15:0,9,770	0/0:22,0:19:4.99:0,5,717	0/0:29,0:28:63.22:0,63,2114	0/0:41,0:35:57.46:0,57,1809	0/1:19,0:18:7.94:8,0,295	0/1:17,0:14:15.65:16,0,322	0/1:37,0:36:53.88:54,0,688	0/1:33,0:33:24.16:24,0,306	0/1:24,0:21:99:154,0,960	1/1:19,0:17:6.02:74,6,0	0/1:8,0:7:59.96:132,0,60
chr10	24914860	.	C	CAT	2161.20	PASS	AB=0.940;AC=18;AF=0.321;AN=56;BaseQRankSum=4.666;DP=644;FS=0.491;HRun=0;HaplotypeScore=142.4035;InbreedingCoeff=-0.2253;MQ=52.28;MQ0=51;MQRankSum=3.368;QD=5.73;ReadPosRankSum=0.881;VQSLOD=3.3474;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:18:5.83:0,6,37	0/0:7,0:7:1.46:0,1,36	0/0:29,0:7:14.45:0,14,169	0/1:32,0:10:8.96:9,0,111	0/1:34,2:33:74.77:419,0,75	0/1:23,0:20:15.63:468,0,16	1/1:6,10:14:2.82:23,3,0	0/0:27,0:19:43.78:0,44,399	0/0:14,0:13:3:0,3,29	0/1:29,3:27:99:320,0,160	0/1:17,1:18:16.21:192,0,16	0/0:20,0:19:11.66:0,12,103	0/1:23,0:21:30.69:31,0,197	0/1:14,0:13:1.49:1,0,18	0/0:14,0:14:7.54:0,8,89	0/1:20,1:21:59.29:206,0,59	0/0:28,0:28:77.36:0,77,966	0/0:12,0:11:30.04:0,30,411	0/0:22,0:20:47.52:0,48,495	0/0:29,0:29:66.19:0,66,943	0/0:43,0:37:59.37:0,59,774	0/1:17,4:20:37.95:101,0,38	0/1:18,0:15:19.98:99,0,20	0/1:16,18:35:24.74:25,0,208	0/1:32,0:32:46.53:47,0,50	0/1:21,2:20:99:159,0,162	1/1:4,18:20:5.91:65,6,0	0/1:10,0:9:11.05:152,0,11
chr10	24914862	.	CAT	C	715.17	PASS	AB=0.995;AC=24;AF=0.429;AN=56;BaseQRankSum=4.188;DP=641;FS=9.884;HRun=0;HaplotypeScore=139.5975;InbreedingCoeff=-0.2440;MQ=52.72;MQ0=50;MQRankSum=0.164;QD=1.71;ReadPosRankSum=-1.713;VQSLOD=1.7594;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:19,1:18:6:67,6,0	0/1:7,0:7:13.08:13,0,36	0/0:30,0:7:20.13:0,20,228	0/0:33,0:11:22.68:0,23,156	0/1:35,0:32:74.09:90,0,74	1/1:22,0:19:0.43:77,0,0	0/1:17,0:15:13.47:19,0,13	0/1:28,0:22:59.94:60,0,361	0/0:13,0:12:3.01:0,3,48	0/1:31,0:26:92.71:93,0,136	0/1:18,0:18:27.55:28,0,40	0/1:20,0:19:6.15:6,0,44	0/0:23,0:21:7:0,7,71	0/1:14,0:13:11.33:11,0,15	0/0:14,0:14:14.69:0,15,134	0/1:17,1:18:9.74:10,0,116	0/1:27,1:28:22.97:23,0,902	0/1:13,0:12:9.62:10,0,379	0/1:24,0:21:7.57:8,0,440	0/0:29,0:29:19.92:0,20,1040	0/0:44,0:38:65.70:0,66,1030	0/1:21,0:20:44.48:68,0,44	0/1:17,0:14:31.76:41,0,32	0/0:35,1:35:11.26:0,11,179	0/1:31,0:31:29.42:76,0,29	0/1:23,0:20:54.94:55,0,189	1/1:22,0:20:5.90:61,6,0	1/1:10,0:9:9.16:65,9,0
chr10	24914864	.	T	TACAC	5463	PASS	AB=0.830;AC=36;AF=0.643;AN=56;BaseQRankSum=3.630;DP=638;FS=28.560;HRun=0;HaplotypeScore=131.5575;InbreedingCoeff=0.6406;MQ=53.67;MQ0=48;MQRankSum=2.021;QD=12.82;ReadPosRankSum=-0.447;VQSLOD=2.7673;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:19:1.41:0,1,4	1/1:7,0:7:8.60:80,9,0	0/0:31,0:9:18.75:0,19,234	0/1:34,0:12:48.82:49,0,225	1/1:33,0:30:39.34:804,39,0	1/1:24,0:21:45.12:868,45,0	1/1:16,0:14:6.01:100,6,0	1/1:9,0:22:5.62:172,6,0	1/1:2,10:12:2.97:20,3,0	0/1:30,0:25:2.37:716,0,2	1/1:16,2:18:18.05:358,18,0	0/0:6,12:19:1.49:0,1,4	1/1:13,10:22:6.49:126,6,0	0/1:5,8:12:0.01:0,0,0	0/1:8,0:14:0:0,0,0	1/1:18,0:18:26.88:555,27,0	0/0:27,0:27:60.43:0,60,986	0/0:13,0:12:25.91:0,26,390	0/0:24,0:21:31.53:0,32,464	0/0:30,0:31:72.20:0,72,1092	0/0:44,0:38:65.84:0,66,1004	1/1:20,0:19:14.72:224,15,0	1/1:13,1:12:15.03:279,15,0	1/1:35,0:34:16.70:164,17,0	1/1:12,18:30:6.01:99,6,0	1/1:23,1:21:29.27:457,29,0	1/1:22,0:20:5.75:102,6,0	1/1:10,0:9:15.02:290,15,0
chr10	24915350	.	G	GT	9420.94	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-4.690;DP=526;FS=2.753;HRun=9;HaplotypeScore=76.9974;InbreedingCoeff=0.9904;MQ=73.75;MQ0=0;MQRankSum=-1.893;QD=26.10;ReadPosRankSum=3.488;VQSLOD=5.3602;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:41.99:0,42,365	1/1:0,11:11:30.04:318,30,0	0/0:15,0:15:22.37:0,22,193	0/0:12,0:12:15.70:0,16,166	1/1:4,27:32:81.01:862,81,0	1/1:3,16:19:25.11:505,25,0	1/1:1,11:12:30.08:332,30,0	0/0:25,0:25:62.97:0,63,544	1/1:1,14:15:39.11:431,39,0	1/1:3,25:28:75.18:813,75,0	1/1:2,28:30:75.20:824,75,0	1/1:3,14:17:36.10:398,36,0	1/1:4,14:18:42.11:464,42,0	1/1:2,14:16:42.11:462,42,0	1/1:5,8:14:26.91:280,27,0	1/1:4,16:20:19.07:439,19,0	0/0:11,0:11:26.95:0,27,225	0/0:8,0:8:17.99:0,18,156	0/0:28,0:28:71.33:0,71,605	0/0:38,0:38:95.91:0,96,821	0/0:11,0:11:32.99:0,33,286	1/1:1,6:7:18.05:199,18,0	1/1:6,18:24:54.15:596,54,0	1/1:4,5:9:15.04:166,15,0	1/1:3,15:18:39.11:431,39,0	1/1:5,24:29:72.19:796,72,0	1/1:6,27:32:52.16:804,52,0	1/1:0,9:9:27.07:299,27,0
chr10	24915464	.	TA	T	2256.03	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=10.042;DP=442;FS=0.000;HRun=9;HaplotypeScore=43.2932;InbreedingCoeff=0.9858;MQ=73.75;MQ0=1;MQRankSum=0.036;QD=20.89;ReadPosRankSum=-1.288;VQSLOD=3.2278;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:1,0:11:25.57:0,26,130	0/0:10,0:10:24.07:0,24,277	0/0:12,0:11:23.92:0,24,215	0/0:10,0:9:13.73:0,14,164	0/0:27,0:28:72.05:0,72,810	0/0:18,0:18:30.56:0,31,502	0/0:13,0:13:39.10:0,39,439	1/1:3,22:25:65.97:586,66,0	0/0:15,0:15:33.10:0,33,381	0/0:20,0:20:57.15:0,57,641	0/0:20,0:20:60.16:0,60,680	0/0:15,0:15:42.10:0,42,464	0/0:17,0:17:42.12:0,42,485	0/0:10,0:10:27.08:0,27,312	0/0:16,0:16:45.06:0,45,494	0/0:13,0:13:36.11:0,36,415	1/1:0,9:9:24.01:220,24,0	1/1:5,16:21:24.49:388,24,0	1/1:2,17:19:51.01:462,51,0	1/1:2,25:27:74.95:676,75,0	1/1:3,4:7:12:110,12,0	0/0:9,0:9:27.08:0,27,312	0/0:17,0:17:45.12:0,45,509	0/0:9,0:9:27.08:0,27,312	0/0:20,0:20:57.17:0,57,658	0/0:18,0:18:45.13:0,45,519	0/0:26,0:26:69.19:0,69,786	0/0:7,0:7:21.06:0,21,242
chr10	24917005	.	A	AT	19282.29	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-9.642;DP=589;FS=1.270;HRun=4;HaplotypeScore=49.2831;InbreedingCoeff=0.9858;MQ=87.13;MQ0=0;MQRankSum=-7.241;QD=35.84;ReadPosRankSum=5.156;VQSLOD=4.7801;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:27.08:0,27,305	1/1:0,4:4:12.04:164,12,0	0/0:21,0:21:42.10:0,42,467	0/0:20,0:20:52.86:0,53,530	1/1:0,32:32:96.32:1313,96,0	1/1:3,35:38:90.30:1231,90,0	1/1:0,10:10:27.09:369,27,0	1/1:4,25:29:75.25:1025,75,0	1/1:1,9:10:24.08:328,24,0	1/1:3,26:29:81.27:1099,81,0	1/1:5,23:28:66.13:861,66,0	1/1:0,23:23:63.21:862,63,0	1/1:0,17:17:48.16:656,48,0	1/1:0,18:18:51.17:697,51,0	1/1:3,25:28:72.24:985,72,0	1/1:2,25:27:69.23:944,69,0	1/1:1,17:18:45.15:616,45,0	1/1:1,10:11:30.10:410,30,0	1/1:2,21:23:63.20:845,63,0	1/1:2,28:30:84.19:1107,84,0	1/1:0,12:12:30.10:410,30,0	1/1:2,15:17:36.12:493,36,0	1/1:1,22:23:60.20:821,60,0	1/1:1,14:15:42.14:575,42,0	1/1:1,34:35:96.32:1313,96,0	1/1:2,21:23:63.19:844,63,0	1/1:2,29:31:75.25:1026,75,0	1/1:0,7:7:21.07:287,21,0
chr10	24917707	.	A	ATT	16283.95	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-8.646;DP=468;FS=2.228;HRun=7;HaplotypeScore=49.2535;InbreedingCoeff=0.9396;MQ=83.35;MQ0=2;MQRankSum=-4.876;QD=38.32;ReadPosRankSum=3.836;VQSLOD=4.4442;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:42.11:0,42,489	1/1:0,7:7:21.07:345,21,0	0/0:15,0:15:20.64:0,21,393	0/0:12,0:12:30.04:0,30,317	1/1:6,25:32:78.27:1261,78,0	1/1:4,24:28:60.20:985,60,0	1/1:1,12:13:33.11:541,33,0	1/1:3,26:29:78.24:1229,78,0	1/1:2,16:18:45.15:739,45,0	1/1:1,21:22:63.20:989,63,0	1/1:2,19:21:54.18:886,54,0	1/1:0,9:9:27.09:443,27,0	1/1:2,14:16:45.15:722,45,0	1/1:2,9:11:21.07:345,21,0	1/1:1,11:12:27.09:443,27,0	1/1:2,23:25:66.23:1083,66,0	1/1:1,6:7:15.05:246,15,0	1/1:2,4:6:12.04:197,12,0	1/1:2,12:15:39.13:611,39,0	1/1:2,13:15:36.12:591,36,0	1/1:1,2:3:6.02:98,6,0	1/1:2,14:16:42.14:689,42,0	1/1:5,12:17:26.95:443,27,0	1/1:2,11:13:27.09:443,27,0	1/1:2,20:20:45.15:739,45,0	1/1:6,20:26:60.20:985,60,0	1/1:6,29:35:57.19:936,57,0	1/1:0,7:7:18.06:295,18,0
chr10	24918036	.	AT	A	2152.36	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-1.078;DP=486;FS=1.004;HRun=7;HaplotypeScore=167.2370;InbreedingCoeff=0.9817;MQ=67.14;MQ0=0;MQRankSum=-6.096;QD=21.74;ReadPosRankSum=-0.824;VQSLOD=1.5178;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:84.21:0,84,1025	0/0:13,0:13:39.11:0,39,476	0/0:12,0:11:13.67:0,14,254	0/0:12,0:11:19.81:0,20,259	0/0:28,0:28:78.21:0,78,945	0/0:29,0:29:84.26:0,84,1047	0/0:10,0:10:18.04:0,18,211	1/1:12,28:40:84.13:840,84,0	0/0:20,0:20:60.18:0,60,737	0/0:27,0:27:75.23:0,75,923	0/0:22,0:22:63.16:0,63,768	0/0:20,0:20:57.17:0,57,699	0/0:19,0:19:51.11:0,51,595	0/0:18,0:18:41.92:0,42,524	0/0:19,0:19:57.16:0,57,688	0/0:14,0:14:39.12:0,39,486	1/1:2,9:11:24.05:242,24,0	1/1:0,7:7:15.03:150,15,0	1/1:1,15:16:45.09:454,45,0	1/1:0,16:16:45.09:453,45,0	1/1:0,9:9:20.99:201,21,0	0/0:10,0:10:27.08:0,27,333	0/0:16,0:16:45.14:0,45,562	0/0:14,0:14:42.13:0,42,519	0/0:15,0:15:42.13:0,42,524	0/0:15,0:15:42.13:0,42,522	0/0:17,0:17:38.99:0,39,481	0/0:8,0:8:11.80:0,12,149
chr10	24918229	.	T	TC	18946.59	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=10.821;DP=593;FS=5.076;HRun=2;HaplotypeScore=134.8238;InbreedingCoeff=0.9958;MQ=68.45;MQ0=2;MQRankSum=-3.489;QD=36.86;ReadPosRankSum=4.825;VQSLOD=4.0245;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,102,1408	1/1:0,13:13:27.09:404,27,0	0/0:23,0:23:63.08:0,63,790	0/0:21,0:20:54.18:0,54,745	1/1:1,11:12:24.08:358,24,0	1/1:1,22:23:51.17:761,51,0	1/1:0,27:27:66.22:981,66,0	1/1:0,20:19:57.17:823,57,0	1/1:0,19:19:51.17:762,51,0	1/1:0,26:26:72.16:1037,72,0	1/1:0,11:11:27.09:400,27,0	1/1:1,21:22:57.11:849,57,0	1/1:0,26:26:72.24:1052,72,0	1/1:0,34:34:84.28:1252,84,0	1/1:0,37:37:99:1646,111,0	1/1:1,26:26:63.06:935,63,0	1/1:0,25:25:60.16:895,60,0	1/1:0,21:21:63.21:939,63,0	1/1:0,11:12:30.07:423,30,0	1/1:0,13:13:27.09:401,27,0	1/1:0,25:25:59.63:894,60,0	1/1:0,12:12:27.09:400,27,0	1/1:0,13:13:27.09:404,27,0	1/1:0,31:31:62.78:942,63,0	1/1:0,15:15:36.05:508,36,0	1/1:1,23:24:65.89:948,66,0	1/1:0,14:14:42.14:622,42,0	1/1:0,12:12:21.07:310,21,0
chr10	24918649	.	C	CAG	5817.86	PASS	AC=44;AF=0.880;AN=50;BaseQRankSum=10.367;DP=350;FS=5.986;HRun=0;HaplotypeScore=88.7684;InbreedingCoeff=0.6299;MQ=37.00;MQ0=2;MQRankSum=-9.276;QD=22.29;ReadPosRankSum=-0.081;VQSLOD=4.8884;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,135,1960	1/1:2,8:10:21.07:390,21,0	0/0:20,0:14:33.11:0,33,468	0/0:18,0:11:21.07:0,21,302	1/1:8,21:25:21.07:386,21,0	1/1:1,7:7:6.02:108,6,0	1/1:2,5:6:6.02:108,6,0	1/1:2,3:5:3.01:56,3,0	1/1:2,8:9:9.03:168,9,0	1/1:3,14:14:33.11:600,33,0	1/1:1,19:18:27.09:504,27,0	1/1:0,5:2:6.02:112,6,0	1/1:2,9:11:8.99:132,9,0	1/1:2,3:5:6.02:92,6,0	1/1:0,9:8:6.02:108,6,0	1/1:0,12:7:3.01:53,3,0	1/1:0,2:2:3.01:56,3,0	1/1:2,2:4:6.02:82,6,0	./.	1/1:0,16:12:18.06:332,18,0	./.	1/1:6,17:21:30.10:550,30,0	1/1:4,21:22:36.12:671,36,0	./.	1/1:1,13:12:24.08:444,24,0	1/1:3,10:12:27.09:473,27,0	1/1:2,6:8:9.03:168,9,0	1/1:0,8:5:12.04:224,12,0
chr10	24918816	.	A	AG	8119.66	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=12.409;DP=375;FS=99.462;HRun=2;HaplotypeScore=134.9096;InbreedingCoeff=0.8599;MQ=68.51;MQ0=0;MQRankSum=-13.119;QD=29.31;ReadPosRankSum=0.595;VQSLOD=-0.1727;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,137,1741	1/1:2,8:10:18.06:256,18,0	0/0:27,0:26:65.33:0,65,776	0/0:25,0:23:54.17:0,54,700	1/1:2,15:17:27.09:388,27,0	1/1:3,12:15:30.10:432,30,0	1/1:0,12:12:33.07:451,33,0	1/1:2,8:10:18.06:251,18,0	1/1:3,7:10:27.05:364,27,0	1/1:1,11:12:21.07:302,21,0	1/1:1,6:7:15.05:211,15,0	1/1:1,8:9:24.08:346,24,0	1/1:0,18:18:39.13:564,39,0	1/1:0,9:9:24.08:345,24,0	1/1:2,17:19:54.14:741,54,0	1/1:0,7:7:18.06:259,18,0	1/1:0,4:4:12.04:172,12,0	1/1:1,4:5:12.04:162,12,0	1/1:1,6:7:15.03:189,15,0	1/1:4,14:18:36.12:522,36,0	1/1:1,6:7:11.85:149,12,0	1/1:1,5:6:6.02:87,6,0	1/1:2,10:12:18.06:254,18,0	1/1:0,9:9:8.82:126,9,0	1/1:1,20:21:48.12:670,48,0	1/1:0,13:13:30.10:432,30,0	1/1:4,9:13:27.05:361,27,0	1/1:0,7:7:6.02:86,6,0
chr10	24919221	.	TA	T	14123.80	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=10.215;DP=629;FS=1.998;HRun=4;HaplotypeScore=85.3920;InbreedingCoeff=0.9907;MQ=86.68;MQ0=0;MQRankSum=-6.724;QD=31.04;ReadPosRankSum=5.970;VQSLOD=4.8937;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:39.13:0,39,546	1/1:1,11:12:30.09:360,30,0	0/0:21,0:21:54.08:0,54,642	0/0:36,0:36:74.69:0,75,959	1/1:2,26:28:66.20:788,66,0	1/1:3,20:23:57.17:683,57,0	1/1:0,22:22:63.19:756,63,0	0/0:33,0:33:90.29:0,90,1244	1/1:1,22:23:60.18:720,60,0	1/1:3,25:28:75.23:899,75,0	1/1:3,30:33:81.25:969,81,0	1/1:1,14:15:42.13:504,42,0	1/1:4,33:37:99:1186,99,0	1/1:2,26:28:63.19:755,63,0	1/1:1,36:37:93.29:1116,93,0	1/1:1,22:23:66.20:791,66,0	0/0:13,0:13:36.12:0,36,503	0/0:10,0:10:30.08:0,30,401	0/0:15,0:15:42.14:0,42,588	0/0:12,0:12:36.11:0,36,487	0/0:20,0:20:60.20:0,60,840	1/1:1,20:21:54.17:647,54,0	1/1:3,16:19:42.08:500,42,0	1/1:0,21:21:63.19:756,63,0	1/1:2,28:30:78.24:932,78,0	1/1:0,16:16:48.15:575,48,0	1/1:1,34:35:90.28:1079,90,0	1/1:0,4:4:9.03:108,9,0
chr10	24919397	.	T	TC	2905.34	PASS	AB=0.712;AC=20;AF=0.357;AN=56;BaseQRankSum=10.574;DP=559;FS=46.600;HRun=2;HaplotypeScore=221.1619;InbreedingCoeff=-0.3900;MQ=81.19;MQ0=3;MQRankSum=-11.526;QD=10.02;ReadPosRankSum=2.851;VQSLOD=-0.6775;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:84.25:0,84,1026	0/1:4,6:10:62.22:75,0,62	0/0:49,0:35:84.20:0,84,1008	0/0:66,0:53:99:0,114,1319	0/1:12,16:28:0.70:311,0,1	0/1:7,12:19:99:461,0,169	0/1:2,10:12:13.04:277,0,13	0/0:30,0:30:80.06:0,80,972	0/1:6,4:10:99:148,0,107	0/1:10,4:14:96.38:96,0,264	0/1:8,12:20:48.74:236,0,49	0/1:9,2:11:63.18:63,0,168	0/1:12,4:16:99:131,0,258	0/1:4,3:7:99:108,0,127	0/1:8,1:9:24.68:25,0,167	0/1:14,4:18:99:124,0,397	0/0:23,0:23:69.22:0,69,855	0/0:10,0:10:27.08:0,27,334	0/0:23,0:23:66.19:0,66,795	0/0:22,0:22:54.17:0,54,669	0/0:17,0:17:48.13:0,48,582	0/1:23,9:32:99:232,0,465	0/1:6,11:17:68.91:179,0,69	1/1:1,3:4:1.25:78,1,0	0/1:13,10:23:99:133,0,295	0/1:10,5:15:99:99,0,228	0/1:13,3:16:92.14:92,0,242	0/1:1,8:9:19.09:198,0,19
chr10	24919406	.	CTGTG	C	2365.83	PASS	AB=0.756;AC=17;AF=0.304;AN=56;BaseQRankSum=10.456;DP=523;FS=26.370;HRun=0;HaplotypeScore=247.3529;InbreedingCoeff=-0.4208;MQ=82.63;MQ0=3;MQRankSum=-7.012;QD=9.74;ReadPosRankSum=2.488;VQSLOD=1.5482;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:72.03:0,72,1992	0/1:5,4:9:45.25:45,0,252	0/0:49,0:36:54.86:0,55,1869	0/0:61,0:51:99:0,109,2466	0/1:14,12:26:99:366,0,205	0/1:8,4:12:99:207,0,407	0/1:2,6:8:93.18:148,0,93	0/0:29,0:29:84.28:0,84,1741	0/1:7,4:11:99:212,0,270	0/1:12,2:14:99:100,0,648	0/1:11,8:19:99:203,0,143	0/1:10,2:12:91.02:91,0,436	0/1:12,4:16:99:178,0,693	0/1:4,2:6:98.61:99,0,261	0/0:7,0:7:15.05:0,15,354	0/1:15,3:18:99:131,0,892	0/0:26,0:26:72.23:0,72,1489	0/0:9,0:9:27.09:0,27,593	0/0:22,0:22:62.97:0,63,1243	0/0:24,0:24:69.24:0,69,1478	0/0:18,0:18:51.18:0,51,1093	0/1:24,7:31:99:277,0,1010	0/1:7,6:13:99:191,0,185	0/0:1,2:3:0:0,0,0	0/1:15,5:20:99:154,0,775	0/1:8,3:11:37.32:37,0,485	0/1:12,1:13:29.53:30,0,550	0/1:1,3:4:55.12:55,0,67
chr10	24919413	.	C	CCA	1866.75	PASS	AB=0.774;AC=17;AF=0.315;AN=54;BaseQRankSum=9.497;DP=550;FS=31.325;HRun=0;HaplotypeScore=263.4626;InbreedingCoeff=-0.4595;MQ=79.77;MQ0=2;MQRankSum=-8.140;QD=6.89;ReadPosRankSum=0.989;VQSLOD=1.3881;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:66.04:0,66,929	0/1:6,4:10:33.56:34,0,185	0/0:55,0:40:60.48:0,60,1044	0/0:61,0:48:81.63:0,82,1052	0/1:17,12:29:99:331,0,149	0/1:8,4:12:99:175,0,248	0/1:2,5:8:73.15:104,0,73	0/0:30,0:30:82.54:0,83,1228	0/1:10,4:14:99:168,0,183	0/1:13,2:15:72.37:72,0,422	0/1:15,7:23:99:187,0,139	0/1:10,2:12:69.38:69,0,280	0/1:14,4:18:99:146,0,403	0/1:4,2:6:83.33:83,0,122	0/0:8,0:8:11.72:0,12,182	0/1:16,3:19:99:105,0,521	0/0:25,0:25:66.20:0,66,986	0/0:9,0:9:26.91:0,27,356	0/0:19,0:19:57.14:0,57,775	0/0:24,0:24:66.22:0,66,1006	0/0:18,0:18:54.13:0,54,778	0/1:27,8:35:99:246,0,484	0/1:8,6:14:99:152,0,125	./.	0/1:18,4:22:77.09:77,0,538	0/1:9,3:12:13.76:14,0,314	0/1:16,1:17:16.45:16,0,376	0/1:2,3:5:43.03:43,0,75
chr10	24919426	.	CCCA	C	1679.75	PASS	AB=0.769;AC=19;AF=0.339;AN=56;BaseQRankSum=10.090;DP=540;FS=18.440;HRun=0;HaplotypeScore=255.0592;InbreedingCoeff=-0.4278;MQ=77.12;MQ0=5;MQRankSum=-8.007;QD=5.53;ReadPosRankSum=-3.781;VQSLOD=1.0430;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:71.99:0,72,1571	0/1:5,5:10:60.68:61,0,206	0/0:51,1:38:63.29:0,63,1669	0/1:57,1:42:30.98:31,0,1228	0/1:18,11:29:99:152,0,200	0/1:8,4:12:99:209,0,282	0/1:2,5:7:55:96,0,55	0/0:34,0:34:94.95:0,95,2314	0/1:8,5:13:99:200,0,151	0/1:13,1:14:21.07:21,0,415	0/1:10,11:21:89.43:89,0,121	0/1:10,2:12:83.75:84,0,182	0/1:15,5:20:99:246,0,276	0/1:3,2:5:68.11:92,0,68	0/0:7,1:8:11.93:0,12,102	0/1:15,3:18:99:119,0,407	0/0:26,0:26:78.25:0,78,1852	0/0:11,0:11:33.09:0,33,760	0/0:16,0:16:45.15:0,45,1098	0/0:25,0:25:60.19:0,60,1422	0/0:18,0:18:54.17:0,54,1264	0/1:25,7:32:99:233,0,319	0/1:7,5:12:33.48:33,0,94	1/1:1,1:2:1.25:3,1,0	0/1:16,4:20:91.32:91,0,458	0/1:9,2:11:29.90:30,0,327	0/0:14,3:17:2.21:0,2,298	0/1:2,3:5:38.08:47,0,38
chr10	24919442	.	T	TCTCG	6274.97	PASS	AB=0.848;AC=23;AF=0.426;AN=54;BaseQRankSum=12.764;DP=504;FS=49.405;HRun=0;HaplotypeScore=303.9042;InbreedingCoeff=0.1296;MQ=73.89;MQ0=6;MQRankSum=-10.599;QD=25.30;ReadPosRankSum=3.506;VQSLOD=3.1801;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:69.67:0,70,1292	0/1:5,4:9:4.44:343,0,4	0/0:49,0:32:25.65:0,26,1007	0/0:54,0:31:23.62:0,24,670	1/1:16,11:27:29.40:409,29,0	0/1:8,5:13:15.42:373,0,15	0/1:4,0:4:40.66:65,0,41	0/0:32,0:32:75.24:0,75,1412	1/1:11,2:13:17.61:372,18,0	0/1:12,3:15:99:514,0,185	0/1:23,4:27:94.46:364,0,94	1/1:7,2:9:0.03:193,0,0	0/1:17,1:18:50.55:430,0,51	0/0:3,0:3:0:0,0,0	0/1:5,0:5:16.36:175,0,16	1/1:7,4:11:24.03:476,24,0	0/0:29,0:30:75.23:0,75,1449	0/0:8,0:8:24.08:0,24,478	0/0:12,0:12:36.11:0,36,648	0/0:19,0:19:54.19:0,54,1077	0/0:18,0:18:42.36:0,42,893	1/1:23,8:31:39.01:699,39,0	1/1:11,4:15:14.78:236,15,0	./.	0/1:15,6:21:61.42:830,0,61	0/1:10,2:12:34.01:281,0,34	0/1:11,3:14:55.82:413,0,56	0/1:3,1:4:34.11:102,0,34
chr10	24919447	.	T	TCCTCTCC	7524.08	PASS	AC=36;AF=0.667;AN=54;BaseQRankSum=11.692;DP=392;FS=23.617;HRun=0;HaplotypeScore=184.1793;InbreedingCoeff=0.8755;MQ=79.12;MQ0=6;MQRankSum=-11.337;QD=51.18;ReadPosRankSum=2.632;VQSLOD=3.0346;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:72.72:0,73,1858	1/1:1,4:5:14.92:463,15,0	0/0:49,0:28:72.90:0,73,1378	0/0:53,0:30:26.30:0,26,878	1/1:4,10:15:23.16:459,23,0	1/1:5,5:10:21.07:607,21,0	1/1:2,0:2:6.01:130,6,0	0/0:28,0:28:81.25:0,81,1775	1/1:3,2:5:12.04:363,12,0	1/1:8,3:11:16.72:633,17,0	1/1:19,4:23:27.05:626,27,0	1/1:1,2:3:5.98:123,6,0	1/1:5,0:7:21.06:450,21,0	1/1:2,0:2:3.01:70,3,0	1/1:1,0:1:3:27,3,0	1/1:2,4:6:12:354,12,0	0/0:28,0:28:76.49:0,76,1892	0/0:12,0:12:36.05:0,36,756	0/0:11,0:11:33.10:0,33,784	0/0:20,0:20:60.21:0,60,1621	0/0:18,0:18:51.18:0,51,1363	1/1:7,8:15:25.13:717,25,0	1/1:8,4:12:13.99:376,14,0	./.	1/1:8,6:15:45.13:1203,45,0	1/1:4,2:6:15:314,15,0	1/1:4,3:7:17.81:450,18,0	1/1:1,1:2:6.02:158,6,0
chr10	24919448	.	T	TC	560.77	PASS	AB=1.000;AC=25;AF=0.463;AN=54;BaseQRankSum=8.305;DP=393;FS=1.079;HRun=0;HaplotypeScore=176.8111;InbreedingCoeff=0.2987;MQ=78.95;MQ0=6;MQRankSum=-7.239;QD=4.01;ReadPosRankSum=-1.127;VQSLOD=3.0645;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:72.15:0,72,956	1/1:4,1:5:0.38:26,0,0	0/0:48,0:28:49.81:0,50,712	0/0:53,0:29:11.93:0,12,441	0/1:15,0:15:43.15:43,0,65	1/1:10,0:10:2.50:62,2,0	1/1:1,1:2:5.85:43,6,0	0/0:27,0:27:75.14:0,75,906	0/1:5,0:5:6.53:13,0,7	1/1:11,2:13:4.56:130,5,0	0/1:23,0:23:31.49:31,0,82	0/0:3,0:3:4.97:0,5,18	1/1:6,0:6:13.09:63,13,0	1/1:2,1:3:2.90:16,3,0	1/1:1,0:1:2.84:14,3,0	0/0:6,0:6:9.61:0,10,33	0/0:27,0:27:71.90:0,72,937	0/0:12,0:12:36:0,36,384	0/0:12,0:12:33.10:0,33,446	0/0:21,0:21:60.19:0,60,817	0/0:18,0:18:51.15:0,51,684	0/1:15,0:15:52.99:53,0,62	0/1:12,0:12:38.20:38,0,56	./.	1/1:15,0:15:6.05:117,6,0	0/1:6,0:6:8.76:17,0,9	1/1:7,0:7:0.64:54,1,0	0/1:2,0:2:1.99:7,0,2
chr10	24919539	.	TTC	T	2827.58	PASS	AB=0.946;AC=39;AF=0.722;AN=54;BaseQRankSum=3.416;DP=419;FS=5.133;HRun=0;HaplotypeScore=104.0827;InbreedingCoeff=0.4869;MQ=60.45;MQ0=17;MQRankSum=-0.992;QD=10.43;ReadPosRankSum=-0.257;VQSLOD=2.8834;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:69.23:0,69,1019	0/0:4,0:4:0.42:0,0,0	0/0:54,0:31:28.94:0,29,583	0/0:47,0:23:39.07:0,39,548	0/1:12,0:12:0.11:0,0,0	0/1:5,0:5:0:0,0,0	1/1:11,0:11:2.94:18,3,0	1/1:5,14:19:27.62:482,28,0	0/1:3,0:3:0:0,0,0	1/1:12,0:12:20.47:129,20,0	1/1:8,0:8:2.80:14,3,0	1/1:7,0:7:3.31:11,3,0	1/1:4,0:4:2.91:18,3,0	0/1:7,0:7:0:0,0,0	1/1:9,0:9:0.44:1,0,0	1/1:8,0:8:1.23:3,1,0	1/1:25,0:25:56.31:570,56,0	1/1:22,2:24:48.91:578,49,0	1/1:8,11:19:38.37:425,38,0	0/1:8,12:19:7.80:116,0,8	1/1:21,0:19:38.51:511,39,0	0/1:11,0:11:0.11:0,0,0	1/1:9,0:10:1.25:2,1,0	./.	1/1:12,0:12:0.38:2,0,0	1/1:11,0:11:8.88:58,9,0	0/1:10,0:10:0.02:0,0,0	1/1:3,0:3:2.97:20,3,0
chr10	24919548	.	T	TG	229.10	PASS	AB=0.893;AC=22;AF=0.440;AN=50;BaseQRankSum=7.914;DP=371;FS=5.806;HRun=0;HaplotypeScore=93.7350;InbreedingCoeff=0.5394;MQ=57.90;MQ0=22;MQRankSum=-6.264;QD=2.79;ReadPosRankSum=-1.353;VQSLOD=2.2903;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:37:72.20:0,72,974	1/1:2,1:3:5.90:37,6,0	0/0:45,0:23:31.05:0,31,593	0/0:41,0:17:48.12:0,48,645	./.	1/1:4,0:4:8.72:49,9,0	1/1:7,0:7:5.68:35,6,0	0/0:22,0:22:63.75:0,64,518	1/1:3,0:3:2.88:15,3,0	0/1:9,0:8:5.87:6,0,11	1/1:4,1:5:2.74:26,3,0	0/1:3,2:5:0.76:56,0,1	0/0:3,0:3:0.47:0,0,1	./.	1/1:8,1:9:5.88:48,6,0	0/1:5,1:6:9.53:10,0,12	0/0:27,0:27:58.65:0,59,408	0/0:22,0:22:63.89:0,64,453	0/0:21,0:18:49.40:0,49,377	0/0:20,0:19:38.60:0,39,325	0/0:25,0:23:57.72:0,58,402	0/1:7,0:7:0:0,0,0	1/1:5,1:7:5.69:59,6,0	./.	1/1:8,1:9:2.88:34,3,0	1/1:8,0:7:4.16:11,4,0	0/0:10,0:10:0.47:0,0,1	0/0:1,0:1:2.37:0,2,8
chr10	24919552	.	T	TTG	2070.22	PASS	AB=1.000;AC=43;AF=0.935;AN=46;BaseQRankSum=0.468;DP=443;FS=0.000;HRun=0;HaplotypeScore=128.8127;InbreedingCoeff=0.1722;MQ=52.34;MQ0=27;MQRankSum=0.026;QD=5.93;ReadPosRankSum=-1.091;VQSLOD=3.0637;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:22,14:39:6.01:170,6,0	1/1:6,0:7:5.99:49,6,0	./.	./.	1/1:7,0:7:3.87:25,4,0	0/1:10,0:9:0:1,0,0	1/1:12,0:12:5.80:32,6,0	1/1:29,0:29:11.99:114,12,0	./.	1/1:11,0:9:3:25,3,0	1/1:10,0:11:2.88:18,3,0	1/1:8,0:8:8.99:74,9,0	0/1:6,0:6:0:0,0,0	0/1:9,0:8:0:0,0,0	1/1:14,0:15:8.93:66,9,0	./.	1/1:23,0:30:30.87:486,31,0	1/1:20,0:24:30.36:296,30,0	1/1:18,0:16:11.77:119,12,0	1/1:16,0:18:15.05:206,15,0	1/1:25,0:24:13.01:289,13,0	1/1:10,0:10:3:25,3,0	1/1:8,0:10:2.93:25,3,0	1/1:8,0:8:2.93:25,3,0	1/1:9,0:10:2.60:26,3,0	1/1:11,0:10:8.86:57,9,0	1/1:15,0:14:2.84:14,3,0	./.
chr10	24919594	.	A	ATG	1091.83	PASS	AB=0.767;AC=24;AF=0.545;AN=44;BaseQRankSum=4.855;DP=355;FS=14.102;HRun=0;HaplotypeScore=79.0087;InbreedingCoeff=0.6769;MQ=63.53;MQ0=13;MQRankSum=-5.673;QD=10.20;ReadPosRankSum=-1.399;VQSLOD=2.0673;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:52.25:0,52,864	1/1:0,4:4:3.01:36,3,0	0/0:31,0:15:41.95:0,42,493	0/0:23,0:14:32.92:0,33,420	0/0:1,9:11:1.98:0,2,5	./.	1/1:1,8:9:6.02:92,6,0	0/0:21,0:21:63.14:0,63,863	./.	1/1:1,6:7:18.06:270,18,0	1/1:6,6:12:2.75:47,3,0	1/1:2,6:8:6.02:91,6,0	./.	./.	1/1:0,10:10:3.01:52,3,0	./.	0/0:26,0:26:25.58:0,26,419	0/0:18,0:18:14.09:0,14,305	0/1:9,0:9:1.77:2,0,151	0/0:14,0:13:22.76:0,23,175	0/0:21,0:21:29.03:0,29,511	./.	1/1:4,3:7:2.95:55,3,0	0/1:1,7:8:0:0,0,0	1/1:11,2:13:12.04:200,12,0	1/1:3,5:8:20.97:232,21,0	1/1:9,0:8:11.07:118,11,0	1/1:0,3:3:3.01:57,3,0
chr10	24920584	.	AG	A	412.12	PASS	AC=10;AF=0.833;AN=12;BaseQRankSum=1.774;DP=230;FS=6.486;HRun=3;HaplotypeScore=29.2332;MQ=12.36;MQ0=159;MQRankSum=-0.591;QD=5.28;ReadPosRankSum=-1.877;VQSLOD=-0.3223;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:17:36.12:0,36,517	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	1/1:17,2:1:3.01:35,3,0	1/1:13,1:5:3.01:36,3,0	1/1:8,5:4:12.04:144,12,0	1/1:0,9:8:21.06:246,21,0	1/1:20,3:2:3.01:35,3,0	./.	./.	./.	./.	./.	./.	./.
chr10	24920906	.	CA	C	2072.97	PASS	AC=12;AF=0.600;AN=20;BaseQRankSum=-1.900;DP=180;FS=14.196;HRun=8;HaplotypeScore=67.3089;InbreedingCoeff=0.8289;MQ=80.81;MQ0=6;MQRankSum=-2.100;QD=22.05;ReadPosRankSum=1.218;VQSLOD=2.9427;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:48.03:0,48,531	./.	0/0:34,0:15:37.58:0,38,336	0/0:30,0:13:1.75:0,2,111	./.	./.	./.	1/1:2,23:25:63.06:594,63,0	./.	./.	./.	./.	./.	./.	./.	./.	1/1:3,15:18:36.05:348,36,0	1/1:1,15:16:36.02:339,36,0	1/1:2,15:17:45.04:423,45,0	1/1:1,13:14:39:365,39,0	1/1:0,4:4:12.02:116,12,0	./.	./.	./.	./.	0/0:1,0:1:2.96:0,3,19	./.	./.
chr10	24921496	.	A	AT	12208.59	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=17.376;DP=548;FS=1.948;HRun=0;HaplotypeScore=215.8101;InbreedingCoeff=0.9961;MQ=76.63;MQ0=0;MQRankSum=-14.587;QD=33.82;ReadPosRankSum=4.734;VQSLOD=4.1483;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:90.27:0,90,1238	1/1:3,4:7:14.50:181,14,0	0/0:19,0:19:57.13:0,57,737	0/0:16,0:16:39.12:0,39,514	1/1:2,19:21:42.14:568,42,0	1/1:0,23:23:66.22:890,66,0	1/1:4,13:17:39.13:525,39,0	0/0:29,0:29:87.29:0,87,1217	1/1:1,20:21:46.37:658,46,0	1/1:1,20:21:57.14:778,57,0	1/1:1,13:14:33.10:428,33,0	1/1:2,14:16:39.97:571,40,0	1/1:2,17:19:50.55:693,51,0	1/1:0,17:17:48.16:662,48,0	1/1:3,26:29:72.20:963,72,0	1/1:1,18:19:53.68:736,54,0	0/0:14,0:14:42.14:0,42,587	0/0:12,0:12:36.12:0,36,503	0/0:19,0:19:57.19:0,57,797	0/0:26,0:26:78.26:0,78,1089	0/0:20,0:20:60.20:0,60,839	1/1:2,23:25:55.60:771,56,0	1/1:2,19:22:45.15:609,45,0	1/1:2,8:10:23.70:306,24,0	1/1:1,28:28:75.24:1014,75,0	1/1:1,17:18:45.15:621,45,0	1/1:2,23:25:68.73:946,69,0	1/1:1,7:8:21.07:290,21,0
chr10	24921595	.	A	AC	4509.31	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=0.904;DP=562;FS=1.258;HRun=4;HaplotypeScore=133.6616;InbreedingCoeff=0.9857;MQ=74.38;MQ0=0;MQRankSum=1.189;QD=36.66;ReadPosRankSum=-0.543;VQSLOD=2.9681;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:45.13:0,45,510	0/0:4,0:4:12.03:0,12,136	0/0:19,0:19:42.06:0,42,448	0/0:12,0:12:33.56:0,34,373	0/0:30,0:30:90.24:0,90,1010	0/0:19,0:19:54.15:0,54,612	0/0:16,0:16:39.04:0,39,415	1/1:2,21:23:63.20:842,63,0	0/0:14,0:14:39.07:0,39,423	0/0:30,0:29:90.25:0,90,1007	0/0:37,0:37:99:0,105,1162	0/0:16,0:16:36.10:0,36,408	0/0:20,0:20:57.13:0,57,632	0/0:21,0:21:59.98:0,60,624	1/1:1,24:25:63.21:850,63,0	0/0:27,0:27:78.21:0,78,872	1/1:1,15:16:45.15:615,45,0	1/1:2,2:4:11.99:130,12,0	1/1:1,22:23:66.19:884,66,0	1/1:0,24:24:72.24:984,72,0	1/1:1,7:8:15.05:205,15,0	0/0:26,0:26:69.11:0,69,765	0/0:28,0:28:84.24:0,84,952	0/0:14,0:14:33.09:0,33,374	0/0:17,0:17:45.13:0,45,510	0/0:30,0:30:90.26:0,90,1020	0/0:23,0:22:63.11:0,63,697	0/0:18,0:18:54.15:0,54,612
chr10	24924572	.	T	TTG	10214.96	PASS	AB=0.605;AC=49;AF=0.875;AN=56;BaseQRankSum=-5.152;DP=612;FS=4.632;HRun=0;HaplotypeScore=144.5011;InbreedingCoeff=0.6848;MQ=58.13;MQ0=16;MQRankSum=-1.697;QD=22.25;ReadPosRankSum=4.447;VQSLOD=5.1448;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,11:23:33.11:549,33,0	1/1:3,2:5:6.02:96,6,0	0/0:59,0:37:62.95:0,63,732	0/0:63,0:30:59.86:0,60,691	1/1:2,9:11:18.06:299,18,0	1/1:2,19:21:27.05:443,27,0	1/1:8,18:25:7.29:661,7,0	1/1:9,18:26:57.19:947,57,0	1/1:4,12:16:11.82:199,12,0	1/1:3,8:10:24.08:397,24,0	1/1:8,8:16:12.04:197,12,0	1/1:3,19:21:33.11:531,33,0	1/1:6,22:28:48.14:735,48,0	1/1:6,8:14:18.06:299,18,0	0/0:31,0:31:81.22:0,81,1041	1/1:4,16:20:25.90:393,26,0	1/1:8,20:27:54.17:853,54,0	1/1:5,9:14:30.06:456,30,0	1/1:10,9:18:18.36:371,18,0	1/1:6,7:12:12.01:200,12,0	0/1:9,16:25:48.65:322,0,49	1/1:3,12:14:15.05:249,15,0	1/1:4,7:11:9.03:150,9,0	1/1:8,15:23:21.07:335,21,0	1/1:5,11:15:14.38:249,14,0	1/1:7,15:22:9.69:634,10,0	1/1:4,19:22:38.49:602,38,0	1/1:2,6:8:3.01:50,3,0
chr10	24924589	.	AGTGTGTGTGTGTGTGT	A	4023.76	PASS	AB=0.902;AC=31;AF=0.574;AN=54;BaseQRankSum=3.437;DP=553;FS=3.225;HRun=0;HaplotypeScore=262.6220;InbreedingCoeff=0.1852;MQ=47.95;MQ0=29;MQRankSum=-2.620;QD=11.12;ReadPosRankSum=1.047;VQSLOD=2.5322;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:12.98:0,13,777	0/1:5,1:6:7.32:54,0,7	0/0:42,0:22:7.16:0,7,393	0/0:50,0:22:12.04:0,12,349	1/1:10,0:10:2.99:25,3,0	1/1:15,5:19:7.96:208,8,0	1/1:24,1:24:6.56:115,7,0	0/1:23,0:23:11.96:12,0,211	1/1:15,0:13:8.13:66,8,0	1/1:14,1:14:21.06:409,21,0	0/0:9,2:11:0.47:0,0,1	1/1:18,3:21:17.24:393,17,0	1/1:9,10:21:19.68:964,20,0	0/1:13,2:13:2.59:105,0,3	0/0:32,0:30:54.15:0,54,1276	1/1:17,4:20:20.05:449,20,0	0/1:25,0:24:91.41:187,0,91	0/1:14,0:14:57.24:57,0,202	0/1:14,0:14:59.45:59,0,108	0/1:14,0:13:13.48:13,0,15	0/0:26,0:22:9.01:0,9,144	0/1:13,3:15:18.51:19,0,41	0/1:6,2:8:0.15:0,0,0	0/1:17,1:17:64.44:64,0,67	0/1:10,4:13:0.04:0,0,1	1/1:19,1:20:14.23:502,14,0	1/1:18,2:19:15.02:321,15,0	./.
chr10	24924609	.	TGTGTGTGTGTGTGTGTGAGA	T	5467.91	PASS	AB=0.986;AC=33;AF=0.611;AN=54;BaseQRankSum=2.409;DP=468;FS=2.533;HRun=0;HaplotypeScore=238.7950;InbreedingCoeff=-0.0237;MQ=35.21;MQ0=36;MQRankSum=-1.260;QD=14.50;ReadPosRankSum=2.539;VQSLOD=3.2873;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:12.98:0,13,777	0/1:6,0:5:8.50:54,0,9	0/0:15,0:3:9.03:0,9,397	0/0:23,0:4:12.04:0,12,349	0/1:10,0:9:0.81:82,0,1	0/1:21,0:20:14.42:211,0,14	1/1:16,0:14:9.23:187,9,0	0/1:19,0:17:58.15:58,0,244	0/1:15,1:13:3.02:151,0,3	1/1:12,0:10:21.07:495,21,0	0/1:14,1:13:5.85:43,0,6	1/1:18,2:19:19.31:501,19,0	1/1:22,1:23:11.49:1039,11,0	1/1:17,0:14:2.80:181,3,0	0/1:28,0:28:9.72:10,0,1244	1/1:18,2:20:32.23:689,32,0	0/1:20,0:19:91.34:255,0,91	0/1:12,0:12:17.51:18,0,312	0/1:16,0:16:99:106,0,223	0/1:15,0:14:31.61:54,0,32	0/0:24,0:17:11.05:0,11,150	0/1:18,0:17:35.07:58,0,35	1/1:5,1:6:5.58:52,6,0	0/1:18,0:17:65.25:104,0,65	1/1:12,0:9:5.19:39,5,0	1/1:21,0:19:12.81:691,13,0	1/1:13,1:13:19.26:392,19,0	./.
chr10	24924648	.	GAGAGAGAGAGAGAGAA	G	612.57	PASS	AB=0.996;AC=19;AF=0.352;AN=54;BaseQRankSum=-3.236;DP=463;FS=11.324;HRun=0;HaplotypeScore=234.3197;InbreedingCoeff=-0.2483;MQ=45.26;MQ0=27;MQRankSum=-3.191;QD=2.12;ReadPosRankSum=-7.306;VQSLOD=-0.7209;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	./.	0/0:6,0:5:0.47:0,0,1	0/1:13,0:4:10.23:10,0,15	0/1:17,0:6:0.21:0,0,43	0/1:15,0:14:13.55:14,0,740	0/1:24,0:23:53.72:54,0,736	0/1:17,0:16:15.74:16,0,723	0/1:20,0:19:99:117,0,204	0/1:14,0:13:5.59:6,0,888	0/0:14,0:12:4.53:0,5,694	0/1:18,0:16:26.35:26,0,595	0/1:18,0:18:2.68:3,0,736	0/0:18,0:17:14.35:0,14,699	0/1:14,0:12:11.15:11,0,383	1/1:9,12:19:1.07:349,1,0	0/1:19,0:19:24.60:25,0,862	0/0:21,0:21:39.90:0,40,1213	0/0:11,0:10:18.04:0,18,590	0/0:20,0:15:18.40:0,18,462	0/0:18,0:17:42.58:0,43,981	0/0:21,0:18:34.31:0,34,784	0/1:17,0:15:5.94:6,0,579	0/0:11,0:11:9.39:0,9,593	0/1:25,0:24:25.17:25,0,1095	0/1:15,0:11:27.89:28,0,458	0/0:25,0:22:27.40:0,27,1310	0/1:12,0:11:48.83:49,0,325	1/1:9,0:6:2.97:20,3,0
chr10	24924660	.	GAGAA	G	4755.50	PASS	AB=1.000;AC=47;AF=0.870;AN=54;BaseQRankSum=-1.235;DP=487;FS=0.000;HRun=0;HaplotypeScore=149.7515;InbreedingCoeff=-0.1182;MQ=54.93;MQ0=24;MQRankSum=4.459;QD=9.93;ReadPosRankSum=5.727;VQSLOD=3.5371;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	1/1:5,0:4:1.47:5,1,0	0/1:28,0:9:35.39:35,0,47	0/1:33,0:14:15.50:16,0,43	1/1:16,0:15:8.32:130,8,0	1/1:20,0:20:34.59:251,35,0	1/1:15,1:15:5.79:169,6,0	1/1:29,0:28:75.27:630,75,0	1/1:14,1:14:7.95:146,8,0	1/1:13,1:12:24.56:210,25,0	1/1:16,0:14:24.26:297,24,0	1/1:16,0:16:28.18:246,28,0	1/1:16,1:16:21.48:247,21,0	1/1:13,0:11:11.94:103,12,0	1/1:18,0:16:1.05:83,1,0	1/1:18,1:19:39.20:291,39,0	0/1:21,0:21:76:76,0,107	0/1:11,0:10:7.71:8,0,72	0/1:20,0:17:49.85:50,0,186	0/1:18,0:17:40.50:40,0,106	0/1:22,0:19:99:114,0,153	1/1:15,1:15:26.59:248,27,0	1/1:11,0:10:12.03:169,12,0	1/1:27,0:26:45.11:303,45,0	1/1:15,0:13:23.41:232,23,0	1/1:24,0:22:53.36:446,53,0	1/1:11,0:11:29.53:192,30,0	1/1:8,0:6:2.97:20,3,0
chr10	24924662	.	GAA	G	5624.85	PASS	AB=1.000;AC=43;AF=0.796;AN=54;BaseQRankSum=-1.839;DP=489;FS=0.518;HRun=3;HaplotypeScore=134.1568;InbreedingCoeff=0.5441;MQ=56.43;MQ0=24;MQRankSum=3.971;QD=13.75;ReadPosRankSum=4.169;VQSLOD=1.9509;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	1/1:2,3:4:2.33:11,2,0	0/1:29,0:10:38.22:38,0,46	0/1:33,0:14:16.55:17,0,43	1/1:16,0:15:21.83:221,22,0	1/1:19,0:19:41.59:369,42,0	1/1:18,0:17:18.95:271,19,0	1/1:28,0:27:80.80:683,81,0	1/1:16,0:15:26.19:262,26,0	1/1:14,0:12:26.67:255,27,0	1/1:16,0:14:24.92:278,25,0	1/1:18,0:18:31.42:329,31,0	1/1:16,1:16:21.86:249,22,0	1/1:11,2:11:17.62:150,18,0	1/1:17,0:15:0.88:45,1,0	1/1:16,1:17:41.87:389,42,0	0/0:21,0:21:28.89:0,29,184	0/0:11,0:10:15.87:0,16,103	0/1:21,0:18:48.11:48,0,229	0/0:17,0:17:36.26:0,36,196	0/0:23,0:20:9.37:0,9,204	1/1:16,0:15:23.54:261,24,0	1/1:11,0:10:24.42:226,24,0	1/1:26,2:27:45.47:492,45,0	1/1:14,0:12:25.43:275,25,0	1/1:24,0:22:59.43:503,59,0	1/1:10,1:11:29.66:235,30,0	1/1:2,6:6:2.97:20,3,0
chr10	24929177	.	GTATATATATATATATATATATATATATA	G	360.77	PASS	AC=2;AF=0.063;AN=32;BaseQRankSum=1.935;DP=159;FS=3.072;HRun=0;HaplotypeScore=88.8930;InbreedingCoeff=0.1902;MQ=64.52;MQ0=9;MQRankSum=-2.090;QD=32.80;ReadPosRankSum=2.348;VQSLOD=1.5759;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:4:3.01:0,3,183	0/0:3,0:3:3.01:0,3,191	0/0:11,0:5:8.76:0,9,197	0/0:39,0:6:6.02:0,6,123	./.	0/0:4,0:4:9.02:0,9,517	0/0:3,0:3:3.01:0,3,113	0/0:24,0:24:57.18:0,57,2595	./.	0/0:4,0:4:3:0,3,28	./.	./.	./.	0/0:2,0:2:3.01:0,3,140	1/1:6,5:11:6.02:437,6,0	./.	0/0:7,0:7:6.02:0,6,435	0/0:4,0:4:9.03:0,9,442	0/0:5,0:5:3:0,3,26	./.	./.	./.	./.	./.	0/0:5,0:5:9.03:0,9,623	./.	0/0:6,0:6:3.01:0,3,88	0/0:4,0:4:12.04:0,12,1025
chr10	24929350	.	A	AAT	317.95	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-3.544;DP=270;FS=0.000;HRun=0;HaplotypeScore=29.1588;InbreedingCoeff=0.5705;MQ=69.47;MQ0=1;MQRankSum=-1.026;QD=26.50;ReadPosRankSum=0.170;VQSLOD=3.7966;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:54.13:0,54,689	0/0:2,0:2:6.01:0,6,66	0/0:8,0:7:11.71:0,12,125	0/0:3,0:3:6.01:0,6,66	0/0:14,0:14:39.13:0,39,512	0/0:20,0:20:57.17:0,57,733	0/0:5,0:5:12.04:0,12,158	0/0:27,0:27:57.18:0,57,737	0/0:5,0:5:15.05:0,15,197	0/0:9,0:8:27.09:0,27,355	0/0:7,0:7:21.07:0,21,276	0/0:8,0:8:24.07:0,24,303	0/0:9,0:9:24.07:0,24,303	0/0:8,0:8:24.07:0,24,302	1/1:2,10:11:24.08:411,24,0	0/0:3,0:3:6.02:0,6,79	0/0:10,0:10:30.10:0,30,394	0/0:11,0:11:27.04:0,27,332	0/0:15,0:15:42.13:0,42,540	0/0:8,0:8:24.06:0,24,301	0/0:3,0:3:9.03:0,9,118	0/0:2,0:2:3:0,3,27	0/0:3,0:3:9.01:0,9,91	0/0:12,0:12:33.11:0,33,433	0/0:14,0:14:39.10:0,39,482	0/0:13,0:13:33.11:0,33,433	0/0:8,0:8:21.07:0,21,276	0/0:11,0:11:33.09:0,33,418
chr10	24929738	.	C	CT	702.48	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-1.183;DP=622;FS=1.715;HRun=7;HaplotypeScore=72.9125;InbreedingCoeff=0.9722;MQ=82.59;MQ0=0;MQRankSum=-2.431;QD=29.27;ReadPosRankSum=0.229;VQSLOD=4.0529;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:81.09:0,81,775	0/0:14,0:14:39.06:0,39,376	0/0:17,0:17:33:0,33,300	0/0:20,0:20:33.03:0,33,302	0/0:34,0:34:96.09:0,96,912	0/0:30,0:30:90.15:0,90,869	0/0:8,0:8:18:0,18,167	0/0:22,0:22:51.06:0,51,488	0/0:20,0:20:54.09:0,54,521	0/0:29,0:29:75.12:0,75,724	0/0:26,0:26:75.10:0,75,718	0/0:22,0:22:63.10:0,63,608	0/0:32,0:32:90.09:0,90,860	0/0:25,0:25:72.12:0,72,695	1/1:2,22:24:66.20:797,66,0	0/0:22,0:22:60.08:0,60,573	0/0:16,0:16:48.08:0,48,463	0/0:17,0:17:48.08:0,48,463	0/0:21,0:21:57.08:0,57,546	0/0:19,0:19:57.09:0,57,550	0/0:25,0:25:57.07:0,57,544	0/0:30,0:30:84.11:0,84,800	0/0:22,0:22:66.09:0,66,631	0/0:8,0:8:21.03:0,21,203	0/0:21,0:21:60.08:0,60,575	0/0:31,0:31:87.13:0,87,837	0/0:28,0:28:78.10:0,78,742	0/0:5,0:5:15.02:0,15,145
chr10	24929969	.	CT	C	5887.10	PASS	AB=0.739;AC=50;AF=0.893;AN=56;BaseQRankSum=-4.259;DP=429;FS=0.000;HRun=13;HaplotypeScore=47.3317;InbreedingCoeff=0.5817;MQ=69.16;MQ0=1;MQRankSum=-1.496;QD=14.50;ReadPosRankSum=4.606;VQSLOD=5.1723;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,14:20:34.81:247,35,0	1/1:2,8:10:23.84:175,24,0	0/1:12,1:11:5.13:5,0,61	0/0:6,0:4:0.67:0,1,24	1/1:5,26:31:65.51:481,66,0	1/1:4,20:24:47.70:350,48,0	1/1:0,6:7:19.93:137,20,0	1/1:5,18:24:46.70:334,47,0	1/1:1,9:10:23.85:175,24,0	1/1:6,21:27:64.60:463,65,0	1/1:5,16:24:48.29:339,48,0	1/1:2,11:16:35.93:236,36,0	1/1:0,4:5:10.99:72,11,0	1/1:2,10:12:20.87:153,21,0	0/0:4,0:17:23.04:0,23,142	1/1:0,15:15:41.76:306,42,0	1/1:6,7:13:14.85:109,15,0	1/1:3,7:10:11.91:88,12,0	0/1:2,8:11:0.23:151,0,0	1/1:3,13:16:35.04:261,35,0	1/1:2,5:7:11.89:88,12,0	1/1:2,11:13:9.60:233,10,0	1/1:5,16:22:43.74:312,44,0	1/1:1,8:9:17.88:131,18,0	1/1:0,11:13:33.90:231,34,0	1/1:6,22:28:59.52:437,60,0	1/1:3,14:17:32.80:241,33,0	1/1:1,6:7:17.89:131,18,0
chr10	24932248	.	A	AT	1580.14	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-5.969;DP=618;FS=3.706;HRun=3;HaplotypeScore=64.1883;InbreedingCoeff=0.9801;MQ=75.64;MQ0=0;MQRankSum=-2.530;QD=35.11;ReadPosRankSum=1.025;VQSLOD=4.3511;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,42:45:99:1675,120,0	0/0:5,0:5:15.05:0,15,180	0/0:18,0:18:21.61:0,22,482	0/0:31,0:31:53.80:0,54,842	0/0:19,0:19:48.13:0,48,564	0/0:22,0:22:66.19:0,66,780	0/0:23,0:23:66.19:0,66,781	0/0:29,0:29:78.23:0,78,928	0/0:15,0:15:42.08:0,42,468	0/0:19,0:19:48.13:0,48,556	0/0:15,0:15:39.12:0,39,467	0/0:25,0:25:69.14:0,69,788	0/0:21,0:21:63.16:0,63,731	0/0:20,0:20:60.18:0,60,720	0/0:20,0:20:57.17:0,57,673	0/0:27,0:27:78.24:0,78,936	0/0:45,0:45:99:0,132,1567	0/0:19,0:19:51.12:0,51,595	0/0:19,0:19:54.16:0,54,645	0/0:14,0:14:42.13:0,42,504	0/0:40,0:40:99:0,117,1389	0/0:15,0:15:45.11:0,45,514	0/0:10,0:10:30.09:0,30,360	0/0:23,0:23:69.20:0,69,815	0/0:25,0:25:69.21:0,69,827	0/0:25,0:25:66.20:0,66,792	0/0:18,0:18:48.15:0,48,576	0/0:11,0:11:33.06:0,33,380
chr10	24932410	.	A	ATATC	1269.12	PASS	AB=1.000;AC=14;AF=0.304;AN=46;BaseQRankSum=-4.172;DP=378;FS=0.000;HRun=0;HaplotypeScore=74.3748;InbreedingCoeff=0.6170;MQ=65.01;MQ0=13;MQRankSum=0.807;QD=11.04;ReadPosRankSum=-2.455;VQSLOD=1.8658;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:17,0:17:13.86:14,0,18	0/0:2,0:5:3.47:0,3,29	./.	./.	0/0:11,0:17:15.02:0,15,140	0/0:15,0:15:15.05:0,15,228	0/0:9,0:9:5.04:0,5,69	0/1:27,0:27:0:0,0,0	0/0:8,0:11:9.01:0,9,84	0/0:7,0:13:18.02:0,18,167	0/0:17,0:17:24.08:0,24,365	0/0:13,0:13:15.03:0,15,228	./.	./.	1/1:6,4:10:12.04:279,12,0	0/0:11,0:14:9.01:0,9,84	1/1:14,9:23:21.07:488,21,0	0/0:13,0:13:18.06:0,18,270	./.	1/1:5,5:10:12.04:277,12,0	1/1:7,2:9:3.01:70,3,0	1/1:8,6:14:12.04:276,12,0	0/0:22,0:22:33.11:0,33,485	0/0:7,0:7:6.02:0,6,91	0/0:18,0:18:32.97:0,33,469	0/0:7,0:10:3.11:0,3,9	0/0:8,0:14:2.90:0,3,28	1/1:3,0:5:2.94:18,3,0
chr10	24932529	.	TAGAGAG	T	470.13	PASS	AB=1.000;AC=7;AF=0.140;AN=50;BaseQRankSum=-0.836;DP=196;FS=4.508;HRun=0;HaplotypeScore=69.8745;InbreedingCoeff=0.2997;MQ=54.18;MQ0=6;MQRankSum=-2.582;QD=10.22;ReadPosRankSum=0.922;VQSLOD=1.5385;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:1,2:3:3:26,3,0	0/0:2,0:2:5.89:0,6,89	0/0:17,0:3:6.88:0,7,55	0/1:19,0:7:6.20:6,0,44	0/0:5,0:5:3.01:0,3,74	0/0:6,0:5:2.99:0,3,72	0/0:4,0:4:6.02:0,6,129	1/1:16,4:18:29.87:545,30,0	0/0:4,0:4:3.01:0,3,63	0/0:12,0:11:29.31:0,29,473	0/0:9,0:9:5.96:0,6,141	1/1:4,0:4:0.04:0,0,0	0/0:4,0:3:3.01:0,3,73	0/0:4,0:4:6.02:0,6,137	./.	0/0:6,0:6:5.74:0,6,88	0/0:11,0:9:15.01:0,15,351	0/0:5,0:5:9.03:0,9,229	0/0:3,0:3:9.03:0,9,211	0/0:5,0:5:3.01:0,3,75	0/0:1,0:1:3.01:0,3,75	./.	0/0:6,0:6:2.92:0,3,75	./.	0/0:14,0:14:21.07:0,21,491	0/0:7,0:7:17.32:0,17,444	0/0:8,0:7:22.03:0,22,390	0/0:7,0:7:17.98:0,18,306
chr10	24932556	.	ATG	A	181.20	PASS	AB=0.893;AC=9;AF=0.167;AN=54;BaseQRankSum=4.078;DP=311;FS=3.178;HRun=0;HaplotypeScore=76.0833;InbreedingCoeff=-0.0565;MQ=67.51;MQ0=7;MQRankSum=-4.771;QD=2.63;ReadPosRankSum=-1.396;VQSLOD=1.6394;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:5,0:5:32.79:33,0,42	0/1:3,1:4:27.54:28,0,93	0/0:30,0:9:13.23:0,13,208	0/0:50,0:19:12.73:0,13,244	0/0:8,2:10:18.06:0,18,287	0/0:4,4:7:6.02:0,6,106	0/0:5,1:6:12.51:0,13,208	0/0:26,0:25:39.64:0,40,1061	1/1:4,0:4:3.01:37,3,0	0/1:14,2:15:82.77:83,0,412	0/0:11,4:15:15.52:0,16,249	0/1:10,3:13:10.51:11,0,305	0/0:5,0:4:6.02:0,6,105	0/0:6,0:6:15.05:0,15,240	0/0:7,0:7:9.03:0,9,148	0/1:8,1:9:20.92:21,0,187	0/0:12,0:11:30.06:0,30,479	0/0:6,0:6:15.05:0,15,255	0/0:7,0:6:11.02:0,11,231	0/0:8,0:8:6.02:0,6,109	0/0:3,0:3:9.03:0,9,152	./.	0/0:8,1:9:11.97:0,12,186	0/1:7,0:7:57.12:57,0,74	0/0:13,3:16:22.38:0,22,380	0/0:8,0:8:24.08:0,24,379	0/1:9,2:10:46.71:47,0,326	0/0:7,0:7:15.05:0,15,259
chr10	24932618	.	CTA	C	265.27	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.178;DP=356;FS=3.507;HRun=0;HaplotypeScore=50.2473;InbreedingCoeff=0.9180;MQ=98.17;MQ0=0;MQRankSum=-1.662;QD=22.11;ReadPosRankSum=-0.621;VQSLOD=3.4984;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,12:12:24.08:359,24,0	0/0:8,0:8:24.07:0,24,429	0/0:20,0:20:57.18:0,57,1016	0/0:19,0:19:48.09:0,48,832	0/0:18,0:18:51.17:0,51,983	0/0:9,0:9:24.08:0,24,463	0/0:7,0:7:21.07:0,21,406	0/0:30,0:30:90.31:0,90,1728	0/0:11,0:11:33.11:0,33,626	0/0:12,0:12:36.12:0,36,661	0/0:11,0:11:33.10:0,33,594	0/0:18,0:18:51.17:0,51,985	0/0:13,0:13:36.12:0,36,695	0/0:11,0:11:33.11:0,33,637	0/0:12,0:12:24.08:0,24,463	0/0:16,0:16:48.16:0,48,917	0/0:16,0:16:45.14:0,45,834	0/0:10,0:10:24.08:0,24,463	0/0:9,0:9:24.07:0,24,431	0/0:11,0:11:30.10:0,30,579	0/0:16,0:16:48.16:0,48,926	0/0:3,0:3:9.03:0,9,173	0/0:8,0:8:21.07:0,21,405	0/0:10,0:10:30.10:0,30,579	0/0:17,0:17:51.17:0,51,976	0/0:10,0:10:30.10:0,30,579	0/0:13,0:13:39.13:0,39,730	0/0:6,0:6:18.06:0,18,347
chr10	24933951	.	CGT	C	343.70	PASS	AB=0.978;AC=5;AF=0.089;AN=56;BaseQRankSum=7.416;DP=642;FS=0.756;HRun=0;HaplotypeScore=93.6116;InbreedingCoeff=0.3775;MQ=62.69;MQ0=3;MQRankSum=1.113;QD=2.75;ReadPosRankSum=-0.212;VQSLOD=1.7471;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:40,1:41:12.38:190,0,12	0/0:6,0:6:18.05:0,18,270	0/0:24,0:10:10.73:0,11,84	0/0:26,0:13:8.18:0,8,105	0/0:29,1:30:42.72:0,43,982	0/0:28,0:28:61.87:0,62,987	0/0:23,0:23:48.10:0,48,669	0/0:21,0:21:57.17:0,57,851	0/0:15,0:15:43.36:0,43,623	0/0:18,0:18:50.70:0,51,711	0/0:16,0:16:42.13:0,42,651	0/0:27,2:29:34.46:0,34,1053	0/0:23,0:23:54.10:0,54,775	0/0:25,1:26:37.44:0,37,1050	1/1:28,3:31:28.37:206,28,0	0/0:24,0:24:60.14:0,60,882	0/1:31,0:31:62.36:62,0,934	0/0:15,0:15:28.98:0,29,362	0/1:21,1:22:1.66:2,0,431	0/0:26,0:26:54.93:0,55,978	0/0:31,0:31:78.10:0,78,1060	0/0:17,0:17:39.12:0,39,619	0/0:15,0:15:39:0,39,592	0/0:29,0:29:78.21:0,78,1200	0/0:13,0:13:38.84:0,39,580	0/0:30,0:31:75.21:0,75,1120	0/0:19,0:19:48.13:0,48,739	0/0:12,0:12:24.08:0,24,380
chr10	24933964	.	GTA	G	340.55	PASS	AB=1.000;AC=4;AF=0.071;AN=56;BaseQRankSum=9.815;DP=694;FS=10.174;HRun=0;HaplotypeScore=99.4908;InbreedingCoeff=0.4256;MQ=61.35;MQ0=12;MQRankSum=0.310;QD=3.58;ReadPosRankSum=-3.386;VQSLOD=0.3798;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:46,0:46:99:123,0,166	0/0:6,0:6:15.02:0,15,247	0/0:52,0:13:14.10:0,14,277	0/0:38,0:20:14.51:0,15,245	0/0:30,0:30:20.75:0,21,988	0/0:25,0:25:43.63:0,44,1105	0/0:19,0:19:40.16:0,40,837	0/0:25,0:25:74.72:0,75,957	0/0:17,0:17:27.40:0,27,693	0/0:21,0:21:60.17:0,60,992	0/0:20,0:20:53.79:0,54,833	0/0:27,0:27:61.95:0,62,1210	0/0:20,0:20:60.15:0,60,994	0/0:27,0:27:63.10:0,63,1242	1/1:31,3:34:11.94:311,12,0	0/0:21,1:22:63.15:0,63,1011	0/0:35,0:35:40.44:0,40,1234	0/1:15,0:15:15.24:15,0,400	0/0:18,0:17:36.76:0,37,532	0/0:27,0:27:50.24:0,50,1213	0/0:32,0:32:90.16:0,90,1375	0/0:15,0:15:45.08:0,45,731	0/0:18,0:18:53.88:0,54,764	0/0:29,0:29:84.18:0,84,1359	0/0:14,0:14:29.37:0,29,653	0/0:30,0:30:90.25:0,90,1493	0/0:20,0:20:60.10:0,60,932	0/0:11,0:11:29.72:0,30,469
chr10	24934688	.	A	AT	9075.61	PASS	AB=0.593;AC=37;AF=0.661;AN=56;BaseQRankSum=-13.463;DP=527;FS=3.781;HRun=9;HaplotypeScore=48.2506;InbreedingCoeff=0.9076;MQ=78.42;MQ0=1;MQRankSum=-0.483;QD=27.17;ReadPosRankSum=3.973;VQSLOD=4.9850;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,102,861	1/1:0,7:7:15.04:166,15,0	0/0:13,0:13:13.40:0,13,121	0/0:13,0:13:23.94:0,24,200	1/1:1,21:22:63.13:683,63,0	1/1:1,18:20:50.97:545,51,0	1/1:2,14:16:36.10:398,36,0	0/0:33,1:34:35.73:0,36,534	1/1:3,20:23:60.16:664,60,0	1/1:4,19:23:60.16:661,60,0	1/1:1,15:16:39.11:431,39,0	1/1:2,10:12:30.08:332,30,0	1/1:2,16:18:45.12:498,45,0	0/1:5,11:16:19.02:266,0,19	1/1:0,17:17:48.13:531,48,0	1/1:3,10:12:21.06:232,21,0	0/0:22,0:22:53.95:0,54,463	0/0:9,0:9:20.99:0,21,182	0/0:21,0:21:59.98:0,60,518	0/0:31,0:31:83.97:0,84,729	0/0:13,0:13:38.99:0,39,339	1/1:0,12:12:33.09:365,33,0	1/1:4,25:29:46.14:737,46,0	1/1:2,13:15:13.05:372,13,0	1/1:0,23:23:66.17:723,66,0	1/1:2,21:23:63.16:688,63,0	1/1:3,18:21:57.11:617,57,0	1/1:2,5:7:15.04:166,15,0
chr10	24935213	.	GA	G	12514.94	PASS	AB=0.559;AC=51;AF=0.911;AN=56;BaseQRankSum=-2.050;DP=648;FS=1.661;HRun=10;HaplotypeScore=79.6697;InbreedingCoeff=0.7266;MQ=73.37;MQ0=0;MQRankSum=-3.426;QD=20.25;ReadPosRankSum=2.999;VQSLOD=5.7675;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:16:20.36:60,20,0	1/1:1,14:15:41.99:364,42,0	0/0:18,0:17:39.09:0,39,408	0/0:12,0:11:12.03:0,12,133	1/1:5,23:28:62.96:546,63,0	1/1:4,28:33:49.83:650,50,0	1/1:1,22:23:62.99:547,63,0	1/1:6,20:26:59.97:520,60,0	1/1:3,16:19:41.98:364,42,0	1/1:4,21:26:34.83:520,35,0	1/1:1,26:28:71:605,71,0	1/1:2,18:20:53.99:469,54,0	1/1:5,27:32:44.80:618,45,0	1/1:4,17:21:47.99:417,48,0	1/1:1,24:25:71.98:625,72,0	1/1:1,16:17:41.98:364,42,0	0/1:4,15:19:24.35:270,0,24	1/1:5,17:21:44.99:390,45,0	1/1:1,17:18:20.80:406,21,0	1/1:2,23:25:62.96:546,63,0	1/1:3,21:24:56.98:495,57,0	1/1:5,25:30:71.97:625,72,0	1/1:5,17:22:47.98:417,48,0	1/1:3,13:16:5.81:279,6,0	1/1:2,25:27:68.02:579,68,0	1/1:4,30:35:61.82:750,62,0	1/1:4,29:33:77.98:677,78,0	1/1:1,17:18:47.94:410,48,0
chr10	24936210	.	GT	G	11899.25	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=11.980;DP=592;FS=2.948;HRun=6;HaplotypeScore=57.0778;InbreedingCoeff=0.9944;MQ=86.65;MQ0=0;MQRankSum=-3.552;QD=28.81;ReadPosRankSum=5.005;VQSLOD=5.3055;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,16:19:45.11:483,45,0	1/1:0,10:10:27.07:290,27,0	0/0:19,0:19:42.44:0,42,526	0/0:20,0:20:44.25:0,44,551	1/1:3,23:26:69.13:728,69,0	1/1:2,25:27:72.18:773,72,0	1/1:1,16:17:45.11:484,45,0	0/0:32,0:32:96.29:0,96,1215	1/1:4,21:25:60.15:645,60,0	1/1:0,20:20:57.13:605,57,0	1/1:1,19:20:54.13:580,54,0	1/1:2,21:23:63.16:677,63,0	1/1:1,15:16:42.11:451,42,0	1/1:0,21:21:60.15:644,60,0	1/1:0,27:27:78.20:838,78,0	1/1:2,20:22:57.14:612,57,0	0/0:26,0:26:75.20:0,75,967	0/0:11,0:11:27.09:0,27,355	0/0:19,0:19:45.15:0,45,592	0/0:29,0:29:81.25:0,81,1044	0/0:23,0:23:63.10:0,63,750	1/1:1,23:24:66.16:709,66,0	1/1:1,25:26:69.17:741,69,0	1/1:0,11:11:30.08:322,30,0	1/1:1,19:20:51.13:548,51,0	1/1:1,26:28:83.23:866,83,0	1/1:1,25:26:72.18:773,72,0	1/1:0,5:5:12.03:129,12,0
chr10	24936669	.	G	GT	996.24	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-8.652;DP=593;FS=1.592;HRun=4;HaplotypeScore=100.3993;InbreedingCoeff=0.9983;MQ=89.05;MQ0=0;MQRankSum=-1.367;QD=29.30;ReadPosRankSum=-3.434;VQSLOD=1.7644;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:63.18:0,63,714	0/0:15,0:15:36.10:0,36,408	0/0:18,0:18:48.13:0,48,538	0/0:29,0:29:69.49:0,69,745	0/0:16,0:16:42.12:0,42,476	0/0:18,0:18:48.14:0,48,544	0/0:21,0:21:57.16:0,57,647	1/1:4,30:34:81.26:1091,81,0	0/0:23,0:23:66.19:0,66,749	0/0:19,0:19:57.16:0,57,646	0/0:17,0:17:51.13:0,51,568	0/0:27,0:27:75.21:0,75,851	0/0:28,0:28:78.21:0,78,875	0/0:21,0:21:60.17:0,60,680	0/0:34,0:34:99:0,102,1156	0/0:17,0:17:51.15:0,51,578	0/0:19,0:19:48.09:0,48,523	0/0:11,0:11:33.05:0,33,359	0/0:13,0:13:36.10:0,36,408	0/0:27,0:27:81.23:0,81,917	0/0:11,0:11:27.05:0,27,285	0/0:24,0:24:69.20:0,69,781	0/0:22,0:22:63.18:0,63,713	0/0:27,0:27:78.22:0,78,884	0/0:21,0:21:60.17:0,60,681	0/0:18,0:18:54.14:0,54,604	0/0:29,0:29:81.23:0,81,918	0/0:13,0:13:36.10:0,36,408
chr10	24937731	.	GT	G	9774.81	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-1.307;DP=499;FS=10.871;HRun=9;HaplotypeScore=82.2877;InbreedingCoeff=0.9450;MQ=78.79;MQ0=0;MQRankSum=-1.753;QD=23.44;ReadPosRankSum=5.806;VQSLOD=4.6296;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:13:36.02:0,36,386	1/1:1,15:16:45.02:412,45,0	0/0:15,1:16:4.50:0,4,233	0/0:10,0:10:19.47:0,19,213	1/1:1,38:39:99:925,102,0	1/1:4,15:19:36.01:330,36,0	1/1:2,17:19:48.01:439,48,0	0/0:7,0:32:71.46:0,71,387	1/1:2,20:22:60.03:549,60,0	1/1:4,22:26:65.99:597,66,0	1/1:2,19:21:57.03:522,57,0	1/1:1,6:7:12.01:110,12,0	1/1:0,17:17:45.02:412,45,0	1/1:0,16:16:45.02:412,45,0	0/0:0,0:11:28.41:0,28,144	1/1:3,14:17:42.02:384,42,0	1/1:1,12:13:30.02:275,30,0	1/1:1,4:5:12.01:109,12,0	1/1:1,17:18:19.42:427,19,0	1/1:2,30:32:86.92:777,87,0	1/1:0,14:14:36.02:330,36,0	1/1:3,19:22:19.40:432,19,0	1/1:0,18:18:48.01:439,48,0	1/1:0,5:5:15.01:137,15,0	1/1:0,14:14:42.02:384,42,0	1/1:0,16:16:48.03:439,48,0	1/1:1,22:23:54.03:494,54,0	1/1:0,18:18:48.03:439,48,0
chr10	24938078	.	C	CTTT	17439.04	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-2.362;DP=639;FS=2.467;HRun=8;HaplotypeScore=110.6195;InbreedingCoeff=0.9883;MQ=82.55;MQ0=0;MQRankSum=-3.726;QD=39.82;ReadPosRankSum=3.374;VQSLOD=4.4232;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:66.16:0,66,867	1/1:3,6:9:18.02:318,18,0	0/0:28,0:28:45.08:0,45,687	0/0:11,0:11:24.07:0,24,301	1/1:8,32:46:99:1898,108,0	1/1:5,15:19:36.12:728,36,0	1/1:2,11:13:26.82:545,27,0	0/0:44,0:44:99:0,111,1366	1/1:5,22:27:54.14:1047,54,0	1/1:4,20:25:66.18:1198,66,0	1/1:3,18:24:63.09:1021,63,0	1/1:1,12:15:35.86:706,36,0	1/1:4,25:29:57.20:1152,57,0	1/1:3,21:27:59.85:1004,60,0	1/1:6,0:22:53.13:352,53,0	1/1:2,12:14:31.35:603,31,0	0/0:24,0:24:48.05:0,48,593	0/0:4,0:4:9.02:0,9,118	0/0:16,0:16:45.14:0,45,591	0/0:31,0:31:84.26:0,84,1103	0/0:18,0:18:51.11:0,51,636	1/1:1,17:22:57.09:1004,57,0	1/1:5,19:25:57.13:1069,57,0	1/1:1,12:13:21.07:424,21,0	1/1:2,16:19:41.99:763,42,0	1/1:4,22:27:70.77:1307,71,0	1/1:7,32:42:89.75:1713,90,0	1/1:0,11:19:30.10:589,30,0
chr10	24938650	.	CA	C	17195.64	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=0.414;DP=507;FS=3.287;HRun=2;HaplotypeScore=50.9459;InbreedingCoeff=0.9868;MQ=72.15;MQ0=0;MQRankSum=-3.443;QD=36.43;ReadPosRankSum=3.669;VQSLOD=5.2838;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:51.17:0,51,762	1/1:0,5:5:15.05:195,15,0	0/0:8,0:8:17.94:0,18,200	0/0:9,0:9:27.01:0,27,308	1/1:1,23:24:69.22:895,69,0	1/1:0,23:23:57.19:739,57,0	1/1:0,13:13:33.11:429,33,0	1/1:0,35:35:99:1359,105,0	1/1:0,23:23:66.21:857,66,0	1/1:1,31:32:93.30:1207,93,0	1/1:1,29:30:78.25:1012,78,0	1/1:0,21:21:63.20:818,63,0	1/1:0,17:17:51.17:662,51,0	1/1:0,13:13:39.13:506,39,0	1/1:0,25:25:69.22:896,69,0	1/1:0,18:18:48.16:623,48,0	1/1:1,17:18:45.15:584,45,0	1/1:1,11:12:33.11:428,33,0	1/1:0,14:14:42.10:512,42,0	1/1:0,17:17:48.16:623,48,0	1/1:1,14:15:42.14:545,42,0	1/1:0,9:9:27.09:351,27,0	1/1:0,8:8:24.08:311,24,0	1/1:0,7:7:18.06:234,18,0	1/1:0,15:15:39.13:504,39,0	1/1:1,35:36:99:1349,105,0	1/1:0,28:28:78.25:1012,78,0	1/1:0,14:14:42.14:545,42,0
chr10	24938947	.	A	AACACAC	8122.93	PASS	AB=1.000;AC=39;AF=0.813;AN=48;BaseQRankSum=-2.073;DP=451;FS=10.188;HRun=0;HaplotypeScore=120.5148;InbreedingCoeff=0.6840;MQ=68.81;MQ0=14;MQRankSum=-2.350;QD=25.15;ReadPosRankSum=3.101;VQSLOD=4.1655;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:18:26.65:224,27,0	1/1:5,0:5:11.89:182,12,0	0/0:26,0:20:13.25:0,13,253	0/0:25,0:14:13.01:0,13,153	1/1:3,9:12:3.01:73,3,0	1/1:18,0:18:21.07:511,21,0	1/1:19,0:19:27.07:587,27,0	1/1:27,0:26:26.68:401,27,0	1/1:14,0:14:33.11:659,33,0	1/1:28,0:28:51.14:960,51,0	./.	1/1:12,0:12:15.04:303,15,0	1/1:12,0:12:30.10:614,30,0	1/1:1,7:8:3.01:67,3,0	./.	1/1:18,0:18:30.09:662,30,0	0/1:9,0:8:0.17:0,0,0	1/1:8,0:7:9.92:206,10,0	1/1:19,0:16:6.02:69,6,0	./.	0/0:5,0:5:2.96:0,3,19	1/1:14,0:13:24.06:528,24,0	./.	0/0:11,0:23:2.55:0,3,19	1/1:12,0:12:24.07:550,24,0	1/1:9,13:22:37.77:706,38,0	1/1:28,0:28:32.47:645,32,0	1/1:4,0:17:6.02:176,6,0
chr10	24939322	.	C	CT	19163.73	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-14.665;DP=649;FS=9.081;HRun=0;HaplotypeScore=57.2528;InbreedingCoeff=0.9993;MQ=87.58;MQ0=0;MQRankSum=-2.204;QD=44.78;ReadPosRankSum=5.856;VQSLOD=4.2426;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:33.11:0,33,449	1/1:1,8:9:21.07:335,21,0	0/0:26,0:26:78.23:0,78,1055	0/0:20,0:20:57.16:0,57,740	1/1:1,29:30:84.29:1342,84,0	1/1:0,25:25:75.26:1199,75,0	1/1:0,22:22:51.17:816,51,0	0/0:33,0:33:90.25:0,90,1219	1/1:0,25:25:72.25:1151,72,0	1/1:1,31:32:96.33:1520,96,0	1/1:0,17:17:48.16:767,48,0	1/1:0,18:18:54.18:864,54,0	1/1:0,29:29:84.29:1343,84,0	1/1:1,30:31:78.27:1246,78,0	0/0:31,0:31:90.30:0,90,1258	1/1:0,27:27:81.28:1295,81,0	0/0:19,0:19:51.17:0,51,703	0/0:13,0:13:39.13:0,39,541	0/0:24,0:24:72.23:0,72,989	0/0:19,0:18:51.17:0,51,711	0/0:25,0:25:69.22:0,69,947	1/1:2,22:24:66.23:1055,66,0	1/1:0,23:23:57.19:911,57,0	1/1:0,15:15:42.14:672,42,0	1/1:0,23:23:66.23:1055,66,0	1/1:0,28:28:84.29:1341,84,0	1/1:0,33:33:90.20:1438,90,0	1/1:0,17:17:51.17:815,51,0
chr10	24939655	.	A	AT	12899.79	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=8.216;DP=526;FS=25.718;HRun=4;HaplotypeScore=69.7225;InbreedingCoeff=0.9828;MQ=71.20;MQ0=0;MQRankSum=0.838;QD=36.86;ReadPosRankSum=4.357;VQSLOD=2.8509;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:24.05:0,24,263	1/1:0,7:7:21.07:287,21,0	0/0:16,0:17:37.68:0,38,432	0/0:2,0:2:6.01:0,6,62	1/1:3,25:28:75.25:1026,75,0	1/1:0,16:16:45.15:615,45,0	1/1:0,8:8:24.08:328,24,0	0/0:28,0:28:81.21:0,81,902	1/1:0,12:12:36.12:492,36,0	1/1:1,21:22:63.21:861,63,0	1/1:1,25:26:75.25:1026,75,0	1/1:1,12:13:30.10:410,30,0	1/1:0,20:20:60.20:819,60,0	1/1:3,15:18:39.13:533,39,0	0/0:16,0:16:39.11:0,39,442	1/1:0,18:18:54.18:739,54,0	0/0:23,0:23:63.18:0,63,714	0/0:20,0:20:51.14:0,51,578	0/0:20,0:20:60.17:0,60,681	0/0:26,0:26:78.22:0,78,885	0/0:15,0:15:42.12:0,42,476	1/1:0,15:15:36.12:492,36,0	1/1:2,24:26:66.18:903,66,0	1/1:0,9:9:27.09:369,27,0	1/1:2,26:28:75.25:1026,75,0	1/1:1,26:27:56.80:1043,57,0	1/1:4,31:35:90.30:1231,90,0	1/1:2,20:22:51.17:698,51,0
chr10	24940114	.	A	AG	11179.77	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-7.065;DP=508;FS=8.271;HRun=7;HaplotypeScore=55.8709;InbreedingCoeff=0.9699;MQ=95.41;MQ0=0;MQRankSum=-9.231;QD=25.29;ReadPosRankSum=5.955;VQSLOD=4.6959;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:21.92:0,22,205	1/1:0,5:5:15.05:181,15,0	0/0:30,0:29:68.96:0,69,646	0/0:27,0:27:65.49:0,65,589	1/1:3,36:39:90.28:1086,90,0	1/1:0,27:27:69.21:834,69,0	1/1:2,16:18:28.63:507,29,0	1/1:20,0:20:13.53:123,14,0	1/1:3,13:16:39.12:471,39,0	1/1:1,19:20:57.17:688,57,0	1/1:1,13:14:36.11:435,36,0	1/1:1,19:20:48.15:580,48,0	1/1:2,13:15:39.12:471,39,0	1/1:4,24:28:54.17:652,54,0	1/1:4,0:19:34.43:175,34,0	1/1:1,13:14:36.11:435,36,0	1/1:1,0:9:20.09:102,20,0	1/1:3,0:6:11.50:58,12,0	1/1:1,1:13:31.44:169,31,0	1/1:2,1:21:51.89:285,52,0	1/1:2,1:14:28.75:146,29,0	1/1:1,12:13:33.10:399,33,0	1/1:2,9:11:24.07:290,24,0	1/1:0,17:17:48.15:580,48,0	1/1:0,22:22:54.17:652,54,0	1/1:4,12:16:36.11:434,36,0	1/1:2,30:32:35.33:993,35,0	1/1:0,12:12:36.11:435,36,0
chr10	24941249	.	G	GA	15510.46	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-0.423;DP=544;FS=1.214;HRun=7;HaplotypeScore=66.8384;InbreedingCoeff=0.9784;MQ=82.92;MQ0=0;MQRankSum=-5.987;QD=31.78;ReadPosRankSum=6.802;VQSLOD=3.6414;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,22:25:60.17:715,60,0	1/1:0,3:3:9.03:109,9,0	0/0:16,0:16:36.03:0,36,339	0/0:18,0:18:44.77:0,45,392	1/1:2,33:35:99:1196,99,0	1/1:1,20:21:51.16:616,51,0	1/1:1,14:15:36.11:435,36,0	0/0:22,0:22:57.06:0,57,541	1/1:0,15:15:42.13:507,42,0	1/1:5,17:22:51.14:602,51,0	1/1:1,20:21:57.17:688,57,0	1/1:1,23:24:60.18:725,60,0	1/1:3,20:23:54.17:652,54,0	1/1:3,13:16:30.09:362,30,0	1/1:1,13:14:36.11:435,36,0	1/1:1,12:13:33.10:399,33,0	1/1:0,30:30:87.27:1051,87,0	1/1:3,22:25:66.20:795,66,0	1/1:1,12:13:39.12:470,39,0	1/1:0,29:29:87.19:1019,87,0	1/1:0,12:12:36.11:435,36,0	1/1:1,17:18:51.16:616,51,0	1/1:0,18:19:54:630,54,0	1/1:1,20:21:51.16:616,51,0	1/1:2,21:23:63.14:744,63,0	1/1:1,22:23:63.18:750,63,0	1/1:2,18:20:54.17:652,54,0	1/1:0,8:8:24.07:290,24,0
chr10	24941355	.	GGAGGAAGA	G	2438.25	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.511;DP=594;FS=12.270;HRun=0;HaplotypeScore=157.6162;InbreedingCoeff=0.9803;MQ=61.15;MQ0=0;MQRankSum=-6.662;QD=62.52;ReadPosRankSum=-1.561;VQSLOD=2.5602;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:87.28:0,87,3448	0/0:7,0:7:18.06:0,18,744	0/0:33,0:24:57.20:0,57,2174	0/0:30,0:25:51.64:0,52,1962	0/0:20,0:20:51.18:0,51,2047	0/0:18,0:18:51.09:0,51,1911	0/0:21,0:21:57.18:0,57,2159	1/1:0,18:18:54.07:1097,54,0	0/0:19,0:19:54.17:0,54,2113	0/0:18,0:18:48.16:0,48,1901	0/0:17,0:17:45.14:0,45,1688	0/0:20,0:20:57.20:0,57,2464	0/0:18,0:18:51.18:0,51,2181	0/0:27,0:27:72.23:0,72,2656	1/1:0,21:21:54.19:1463,54,0	0/0:18,0:18:51.18:0,51,2035	0/0:24,0:24:72.23:0,72,2784	0/0:21,0:21:57.20:0,57,2282	0/0:21,0:21:51.17:0,51,2030	0/0:21,0:21:57.18:0,57,2300	0/0:34,0:34:93.32:0,93,3808	0/0:18,0:18:51.18:0,51,2078	0/0:23,0:23:60.21:0,60,2487	0/0:32,0:32:87.30:0,87,3612	0/0:18,0:18:51.18:0,51,2035	0/0:18,0:18:39.13:0,39,1526	0/0:25,0:25:72.23:0,72,2839	0/0:4,0:4:12.04:0,12,437
chr10	24941720	.	GC	G	7775.68	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-2.566;DP=405;FS=1.373;HRun=9;HaplotypeScore=85.6774;InbreedingCoeff=0.8005;MQ=59.71;MQ0=0;MQRankSum=-2.477;QD=20.41;ReadPosRankSum=3.527;VQSLOD=5.4661;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:10:5.06:0,5,21	1/1:1,4:5:12.01:110,12,0	0/0:6,0:5:9.02:0,9,96	0/0:8,0:6:8.60:0,9,79	1/1:4,11:15:24.01:219,24,0	1/1:4,14:18:38.83:357,39,0	1/1:1,14:15:39:357,39,0	1/1:8,18:26:59.91:540,60,0	1/1:1,17:18:47.80:439,48,0	1/1:5,7:12:17.93:164,18,0	1/1:2,3:5:5.98:55,6,0	1/1:1,16:17:45.02:412,45,0	1/1:1,11:12:33:301,33,0	1/1:1,22:23:57.03:521,57,0	1/1:1,18:19:48.02:434,48,0	1/1:1,13:14:36:329,36,0	1/1:3,21:24:48.01:436,48,0	1/1:3,16:19:48.01:436,48,0	1/1:5,14:18:41.87:364,42,0	1/1:4,5:9:5.97:54,6,0	1/1:6,8:14:8.98:82,9,0	1/1:0,13:13:30.01:274,30,0	1/1:0,8:8:17.80:164,18,0	1/1:1,8:9:24.01:220,24,0	1/1:4,11:15:29.94:274,30,0	1/1:3,16:19:48.02:439,48,0	1/1:2,21:23:63.03:576,63,0	1/1:2,8:10:24.01:220,24,0
chr10	24941732	.	ACC	A	2714.03	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=5.339;DP=425;FS=3.536;HRun=8;HaplotypeScore=112.3800;InbreedingCoeff=0.9470;MQ=63.03;MQ0=0;MQRankSum=-11.645;QD=20.72;ReadPosRankSum=0.806;VQSLOD=2.3183;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:30.36:0,30,366	0/0:4,0:4:9.03:0,9,152	0/0:6,0:6:17.21:0,17,174	0/0:10,0:8:14.22:0,14,181	0/0:14,0:14:30:0,30,369	0/0:17,0:17:38.79:0,39,587	0/0:17,0:17:45.13:0,45,695	1/1:8,17:25:51.13:609,51,0	0/0:19,0:19:56.78:0,57,884	0/0:12,0:12:30.09:0,30,472	0/0:5,0:5:12.02:0,12,152	0/0:18,0:18:51.15:0,51,776	0/0:11,0:11:33.07:0,33,486	0/0:26,0:26:70.37:0,70,1077	1/1:0,20:20:54.16:652,54,0	0/0:15,0:15:42.14:0,42,683	1/1:4,19:23:39.11:472,39,0	1/1:3,20:23:39.11:472,39,0	1/1:6,16:21:45.08:519,45,0	1/1:1,5:6:6.02:72,6,0	1/1:0,12:12:8.80:109,9,0	0/0:15,0:15:42.10:0,42,591	0/0:10,0:10:27.06:0,27,354	0/0:13,0:13:30.09:0,30,456	0/0:11,0:11:24.08:0,24,383	0/0:20,0:20:51.12:0,51,708	0/0:23,0:23:60.18:0,60,931	0/0:9,0:9:27.07:0,27,398
chr10	24944926	.	CTTATT	C	9455.65	PASS	AB=0.714;AC=43;AF=0.860;AN=50;BaseQRankSum=0.670;DP=389;FS=4.689;HRun=0;HaplotypeScore=110.3992;InbreedingCoeff=0.6488;MQ=79.41;MQ0=1;MQRankSum=-4.485;QD=30.60;ReadPosRankSum=4.028;VQSLOD=4.5609;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:45.15:0,45,1259	1/1:2,6:8:15.05:283,15,0	0/0:21,0:18:19.16:0,19,279	0/0:31,0:19:12.85:0,13,269	1/1:9,17:26:51.17:905,51,0	1/1:4,16:20:42.14:773,42,0	1/1:2,5:7:9.03:170,9,0	1/1:15,17:32:51.16:845,51,0	1/1:5,6:11:9.03:170,9,0	1/1:6,16:22:48.12:805,48,0	1/1:4,17:21:33.11:583,33,0	1/1:4,1:5:3.01:57,3,0	1/1:3,8:11:18.06:340,18,0	1/1:1,6:7:15.05:280,15,0	1/1:1,4:5:3.01:57,3,0	1/1:4,8:12:21.07:397,21,0	0/1:6,4:10:19.34:258,0,19	./.	1/1:8,11:19:33.11:624,33,0	1/1:8,12:20:45.14:806,45,0	./.	./.	1/1:4,7:11:11.92:227,12,0	1/1:1,0:1:3:25,3,0	1/1:10,8:18:21.07:397,21,0	1/1:7,10:17:30.09:495,30,0	1/1:4,14:18:30.10:567,30,0	1/1:0,8:8:21.07:394,21,0
chr10	24945018	.	AC	A	4355.68	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=10.687;DP=439;FS=11.930;HRun=1;HaplotypeScore=52.4108;InbreedingCoeff=0.9921;MQ=76.85;MQ0=0;MQRankSum=-2.739;QD=39.96;ReadPosRankSum=-2.628;VQSLOD=3.2932;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:45.13:0,45,673	0/0:8,0:8:24.08:0,24,373	0/0:6,0:6:18.05:0,18,262	0/0:15,0:15:42.12:0,42,603	0/0:25,0:25:72.21:0,72,1076	0/0:22,0:22:66.22:0,66,1032	0/0:7,0:7:21.06:0,21,304	1/1:0,33:33:99:1332,99,0	0/0:13,0:13:36.12:0,36,562	0/0:18,0:18:54.18:0,54,844	0/0:30,0:30:90.30:0,90,1367	0/0:11,0:11:33.11:0,33,516	0/0:10,0:10:27.09:0,27,419	0/0:8,0:8:21.07:0,21,328	1/1:0,11:11:33.11:456,33,0	0/0:9,0:9:27.06:0,27,377	1/1:0,8:8:24.08:334,24,0	1/1:0,5:5:15.05:209,15,0	1/1:0,16:16:48.16:671,48,0	1/1:1,22:23:66.21:892,66,0	1/1:0,13:13:33.11:461,33,0	0/0:15,0:15:45.15:0,45,702	0/0:23,0:23:66.14:0,66,998	0/0:7,0:7:21.07:0,21,328	0/0:16,0:16:48.15:0,48,728	0/0:22,0:22:63.20:0,63,960	0/0:28,0:27:78.22:0,78,1193	0/0:22,0:22:66.20:0,66,1007
chr10	24945362	.	CT	C	3855.44	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-1.134;DP=436;FS=37.245;HRun=14;HaplotypeScore=118.8533;InbreedingCoeff=0.9336;MQ=60.50;MQ0=8;MQRankSum=-1.744;QD=14.28;ReadPosRankSum=5.128;VQSLOD=1.6223;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:35.56:0,36,279	1/1:1,7:8:20.81:144,21,0	0/0:15,0:8:7.29:0,7,30	0/0:25,0:10:3.47:0,3,32	1/1:7,16:23:44.40:308,44,0	1/1:6,10:16:29.58:205,30,0	1/1:2,5:7:14.87:103,15,0	0/0:13,0:21:29.99:0,30,167	1/1:5,9:14:29.55:205,30,0	1/1:7,20:27:58.81:409,59,0	1/1:4,15:19:38.61:267,39,0	1/1:6,9:15:32.35:218,32,0	1/1:8,10:18:32.51:224,33,0	1/1:6,13:19:37.59:252,38,0	0/0:3,0:10:13.73:0,14,66	1/1:4,5:9:14.66:102,15,0	0/0:15,0:20:15.19:0,15,72	0/0:11,0:11:19.12:0,19,100	0/0:7,0:18:30.82:0,31,161	0/0:7,0:15:20.08:0,20,112	0/0:2,0:9:8.18:0,8,37	1/1:3,6:9:17.76:122,18,0	1/1:6,15:21:47.39:325,47,0	1/1:4,6:9:14.81:103,15,0	1/1:4,7:11:17.66:123,18,0	1/1:5,17:22:52.78:359,53,0	1/1:4,11:15:35.56:244,36,0	1/1:0,7:7:20.83:144,21,0
chr10	24945393	.	TTTTTGGATCTTTTTTTTTTTTTC	T	12123.87	PASS	AB=1.000;AC=47;AF=0.839;AN=56;BaseQRankSum=0.771;DP=325;FS=15.379;HRun=0;HaplotypeScore=164.5548;InbreedingCoeff=0.4873;MQ=54.83;MQ0=17;MQRankSum=-0.080;QD=58.29;ReadPosRankSum=2.316;VQSLOD=3.5612;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:19,0:19:14.66:15,0,2640	1/1:1,2:3:6.02:363,6,0	0/0:51,0:13:32.12:0,32,630	0/0:54,0:18:36.28:0,36,374	1/1:13,2:15:4.58:496,5,0	1/1:3,2:4:12.04:480,12,0	1/1:4,0:4:5.98:79,6,0	1/1:10,0:10:23.98:452,24,0	1/1:7,1:6:8.89:298,9,0	1/1:10,9:19:53.77:2068,54,0	1/1:5,1:6:14.97:315,15,0	1/1:4,4:8:20.89:859,21,0	1/1:4,0:4:8.96:291,9,0	1/1:4,4:8:20.98:850,21,0	1/1:7,0:7:11.81:179,12,0	1/1:1,2:3:9.03:420,9,0	0/1:17,0:16:1.52:107,0,2	0/0:12,0:11:15.13:0,15,217	0/1:5,0:5:8.57:89,0,9	1/1:7,0:7:11.89:213,12,0	1/1:4,0:4:3.97:54,4,0	1/1:6,2:8:17.71:545,18,0	1/1:5,5:10:30.09:1161,30,0	1/1:5,2:6:18.01:553,18,0	1/1:3,2:5:9.03:296,9,0	1/1:8,3:10:27.08:858,27,0	1/1:9,3:12:10.62:784,11,0	1/1:2,1:3:9.03:297,9,0
chr10	24945402	.	C	CT	91.73	PASS	AB=0.903;AC=5;AF=0.089;AN=56;BaseQRankSum=-3.326;DP=320;FS=2.460;HRun=13;HaplotypeScore=117.6159;InbreedingCoeff=0.1165;MQ=54.96;MQ0=14;MQRankSum=0.437;QD=1.11;ReadPosRankSum=-2.989;VQSLOD=-0.1092;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:13,9:22:14.10:161,0,14	0/0:3,0:3:4.44:0,4,13	0/1:46,0:13:9.55:10,0,50	0/0:46,0:18:9.56:0,10,54	0/0:15,0:15:14.49:0,14,50	0/0:7,0:5:10.33:0,10,30	0/0:5,0:5:2.51:0,3,7	0/0:12,0:12:5.53:0,6,40	0/0:11,0:9:6.20:0,6,18	0/0:17,0:17:34.65:0,35,101	0/0:6,0:6:8.15:0,8,23	0/0:7,0:7:14.02:0,14,41	0/0:4,0:4:7.18:0,7,20	0/0:7,0:7:12.77:0,13,38	0/0:6,0:5:8.15:0,8,23	0/0:4,0:3:6.48:0,6,19	0/0:14,0:14:9.22:0,9,28	1/1:8,0:7:1.88:5,2,0	0/1:6,0:6:9.24:10,0,9	0/0:6,0:6:8.62:0,9,24	0/0:4,0:4:2:0,2,6	0/0:11,0:11:6.45:0,6,22	0/0:12,0:11:21.29:0,21,63	0/0:8,0:8:10.55:0,11,31	0/0:7,0:6:8.33:0,8,24	0/0:10,0:9:15.83:0,16,46	0/0:11,0:11:15.22:0,15,44	0/0:3,0:3:6.29:0,6,18
chr10	24945413	.	TTTC	T	2571.69	PASS	AB=0.985;AC=44;AF=0.786;AN=56;BaseQRankSum=3.540;DP=378;FS=7.285;HRun=0;HaplotypeScore=122.1601;InbreedingCoeff=0.4881;MQ=55.97;MQ0=14;MQRankSum=-3.396;QD=9.60;ReadPosRankSum=5.787;VQSLOD=2.4408;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:61.38:0,61,824	1/1:5,0:5:6.01:61,6,0	0/0:39,0:11:22.89:0,23,215	0/0:37,0:14:26.10:0,26,195	0/1:18,0:18:48.32:128,0,48	1/1:9,0:7:13.50:88,13,0	1/1:4,1:5:2.50:9,2,0	1/1:18,1:19:20.41:190,20,0	0/1:17,0:15:6.20:44,0,6	1/1:18,1:19:50.31:431,50,0	1/1:11,0:11:18.88:94,19,0	1/1:10,1:11:20.02:179,20,0	1/1:6,0:6:10.02:47,10,0	1/1:8,0:8:22.85:168,23,0	1/1:9,0:8:9.98:35,10,0	1/1:6,0:5:8.51:70,9,0	1/1:15,0:15:18.11:78,18,0	0/0:9,0:7:1.97:0,2,28	0/1:11,0:10:0.88:67,0,1	1/1:11,0:11:20.46:102,20,0	1/1:8,0:7:5.38:26,5,0	0/1:15,1:16:3.93:94,0,4	1/1:15,0:14:36.14:269,36,0	1/1:9,0:9:16.45:106,16,0	1/1:8,0:7:10.49:57,10,0	1/1:15,0:13:19.70:171,20,0	1/1:13,1:14:16.39:170,16,0	1/1:3,0:3:8:49,8,0
chr10	24945414	.	TTC	T	5114.16	PASS	AB=0.762;AC=49;AF=0.875;AN=56;BaseQRankSum=1.293;DP=376;FS=7.489;HRun=0;HaplotypeScore=109.6272;InbreedingCoeff=0.4716;MQ=56.25;MQ0=14;MQRankSum=-2.298;QD=16.29;ReadPosRankSum=5.360;VQSLOD=4.2191;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:33.61:0,34,526	1/1:5,0:5:6:51,6,0	0/1:35,0:10:7.39:7,0,98	0/0:38,0:14:15.01:0,15,111	0/1:7,11:18:5.63:249,0,6	1/1:4,5:7:15.03:169,15,0	1/1:1,4:5:5.95:57,6,0	1/1:9,10:19:47.94:512,48,0	1/1:2,15:15:12:143,12,0	1/1:12,7:19:55.56:512,56,0	1/1:1,10:11:20.94:216,21,0	1/1:5,6:11:21.02:219,21,0	1/1:1,5:6:11.95:132,12,0	1/1:7,2:9:26.98:263,27,0	1/1:0,9:8:12.04:157,12,0	1/1:3,3:5:9.01:90,9,0	1/1:4,11:15:20.46:230,20,0	0/1:4,4:6:1.48:30,0,1	1/1:9,2:10:27.41:216,27,0	1/1:0,11:11:23.98:255,24,0	1/1:2,7:7:5.94:57,6,0	1/1:5,11:16:7.56:167,8,0	1/1:10,6:15:41.87:422,42,0	1/1:2,7:9:17.98:187,18,0	1/1:3,5:7:12.03:144,12,0	1/1:5,10:13:29.24:290,29,0	1/1:6,8:14:25.88:236,26,0	1/1:1,2:3:9.02:104,9,0
chr10	24945415	.	TC	T	3139.33	PASS	AB=0.947;AC=51;AF=0.911;AN=56;BaseQRankSum=2.667;DP=367;FS=0.962;HRun=3;HaplotypeScore=110.8821;InbreedingCoeff=0.4515;MQ=56.74;MQ0=15;MQRankSum=-2.146;QD=10.00;ReadPosRankSum=2.838;VQSLOD=1.5829;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:8.52:0,9,275	1/1:2,3:5:5.85:34,6,0	0/0:33,0:10:1.80:0,2,65	0/1:32,1:14:8.91:9,0,38	1/1:16,2:18:25.24:210,25,0	1/1:9,0:7:14.66:87,15,0	1/1:5,0:5:2.92:17,3,0	1/1:19,0:19:47.68:297,48,0	1/1:16,1:15:11.75:70,12,0	1/1:18,1:19:52.87:346,53,0	1/1:11,0:11:20.67:130,21,0	1/1:11,0:11:20.44:118,20,0	1/1:6,0:6:11.34:59,11,0	1/1:9,0:9:26.51:174,27,0	1/1:9,0:8:11.70:69,12,0	1/1:6,0:5:8.79:52,9,0	1/1:13,0:15:20.48:122,20,0	1/1:6,0:5:2.84:14,3,0	1/1:8,3:10:29.82:260,30,0	1/1:11,0:11:23.46:146,23,0	1/1:9,0:7:5.87:35,6,0	1/1:15,1:16:17.60:106,18,0	1/1:17,0:16:43.92:298,44,0	1/1:9,0:9:17.58:105,18,0	1/1:8,0:7:11.75:70,12,0	1/1:14,1:13:29.53:209,30,0	1/1:12,2:14:26.37:170,26,0	1/1:3,0:3:8.81:53,9,0
chr10	24946551	.	G	GA	4127.94	PASS	AC=14;AF=0.259;AN=54;BaseQRankSum=-11.545;DP=365;FS=44.821;HRun=7;HaplotypeScore=68.9786;InbreedingCoeff=0.9469;MQ=95.96;MQ0=0;MQRankSum=-0.869;QD=32.50;ReadPosRankSum=-1.343;VQSLOD=0.4824;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:54.07:0,54,514	0/0:2,0:2:5.91:0,6,40	0/0:17,0:17:29.98:0,30,272	0/0:21,0:21:48.53:0,49,459	0/0:17,0:17:43.88:0,44,259	0/0:11,0:11:32.29:0,32,194	0/0:13,0:13:12.09:0,12,141	1/1:3,21:24:63.15:724,63,0	0/0:13,0:13:32.36:0,32,200	0/0:9,0:9:25.83:0,26,150	0/0:10,0:10:26.46:0,26,163	0/0:10,0:10:20.50:0,20,121	0/0:10,0:10:26.57:0,27,174	0/0:12,0:12:30.30:0,30,186	1/1:0,14:14:39.12:471,39,0	0/0:6,0:6:12.06:0,12,67	1/1:2,10:12:30.09:362,30,0	1/1:3,11:14:33.10:399,33,0	1/1:2,26:28:81.25:976,81,0	1/1:1,24:25:69.21:834,69,0	1/1:0,10:10:30.09:362,30,0	0/0:3,0:3:5.87:0,6,34	./.	0/0:10,0:10:22.12:0,22,132	0/0:11,0:11:29.49:0,29,192	0/0:18,0:18:45.89:0,46,244	0/0:20,0:20:47.12:0,47,303	0/0:7,0:7:20.53:0,21,123
chr10	24946875	.	TA	T	8525.64	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=16.673;DP=543;FS=21.145;HRun=9;HaplotypeScore=121.2008;InbreedingCoeff=0.9558;MQ=72.26;MQ0=0;MQRankSum=-0.005;QD=23.29;ReadPosRankSum=1.827;VQSLOD=3.5865;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,1:27:41.70:0,42,719	1/1:0,1:1:3:27,3,0	0/0:10,0:10:21.05:0,21,232	0/0:18,0:18:36.08:0,36,393	1/1:2,18:20:53.98:486,54,0	1/1:2,15:17:45.02:412,45,0	1/1:2,13:15:35.97:321,36,0	1/1:4,23:27:69.03:631,69,0	1/1:2,17:19:51.03:467,51,0	1/1:5,17:22:57.03:520,57,0	1/1:4,15:19:22.25:383,22,0	1/1:3,15:18:45.02:412,45,0	1/1:2,12:14:36.02:329,36,0	1/1:0,12:12:33.02:301,33,0	1/1:2,19:21:54.03:494,54,0	1/1:1,14:15:42.02:384,42,0	0/0:33,0:33:81.24:0,81,935	0/0:8,0:8:12.04:0,12,138	0/0:16,0:16:42.12:0,42,485	0/0:44,0:44:99:0,123,1411	0/0:21,0:21:63.16:0,63,708	1/1:2,22:24:60.03:549,60,0	1/1:1,22:23:60.03:548,60,0	1/1:1,6:7:9.48:83,9,0	1/1:5,13:18:25.18:339,25,0	1/1:1,18:19:54.03:494,54,0	1/1:3,31:34:90.52:825,91,0	1/1:2,19:21:57.03:521,57,0
chr10	24947790	.	A	AG	956.39	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-2.616;DP=622;FS=0.760;HRun=1;HaplotypeScore=97.2516;InbreedingCoeff=0.9393;MQ=60.39;MQ0=4;MQRankSum=-3.747;QD=36.78;ReadPosRankSum=-4.755;VQSLOD=2.1008;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,132,1697	0/0:10,0:10:30.06:0,30,369	0/0:19,0:15:42.09:0,42,488	0/0:14,0:10:12.01:0,12,220	0/0:20,0:20:57.16:0,57,711	0/0:24,0:24:60.20:0,60,779	0/0:26,0:26:75.24:0,75,973	1/1:3,23:25:72.23:1051,72,0	0/0:22,0:21:48.16:0,48,623	0/0:22,0:22:63.20:0,63,818	0/0:15,0:13:30.10:0,30,389	0/0:23,0:23:60.16:0,60,742	0/0:20,0:20:54.18:0,54,700	0/0:21,0:21:51.15:0,51,647	0/0:12,0:12:24.06:0,24,297	0/0:18,0:18:42.14:0,42,545	0/0:36,0:36:99:0,99,1285	0/0:40,0:40:99:0,111,1438	0/0:23,0:17:51.16:0,51,650	0/0:22,0:22:63.20:0,63,818	0/0:37,0:37:99:0,111,1435	0/0:17,0:17:51.15:0,51,647	0/0:17,0:17:51.15:0,51,646	0/0:26,0:26:72.23:0,72,933	0/0:18,0:18:54.18:0,54,701	0/0:20,0:19:51.16:0,51,649	0/0:18,0:18:48.16:0,48,619	0/0:4,0:4:12.04:0,12,156
chr10	24951143	.	TG	T	1117.66	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.879;DP=493;FS=1.496;HRun=4;HaplotypeScore=48.9901;InbreedingCoeff=0.9880;MQ=88.98;MQ0=0;MQRankSum=-2.507;QD=31.93;ReadPosRankSum=-4.114;VQSLOD=2.0138;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:24:55.56:0,56,833	0/0:10,0:10:27.09:0,27,378	0/0:25,0:25:69.65:0,70,913	0/0:15,0:15:44.40:0,44,518	0/0:25,0:25:75.25:0,75,1045	0/0:16,0:16:48.16:0,48,671	0/0:10,0:10:30.10:0,30,420	1/1:1,34:35:99:1213,102,0	0/0:16,0:16:48.15:0,48,656	0/0:16,0:16:48.16:0,48,670	0/0:13,0:13:39.13:0,39,545	0/0:8,0:8:21.07:0,21,293	0/0:17,0:17:45.15:0,45,630	0/0:11,0:11:33.11:0,33,462	0/0:13,0:13:36.11:0,36,487	0/0:20,0:20:60.20:0,60,840	0/0:34,0:34:96.31:0,96,1328	0/0:25,0:25:69.22:0,69,946	0/0:18,0:18:51.15:0,51,692	0/0:19,0:19:57.18:0,57,781	0/0:16,0:16:39.13:0,39,546	0/0:8,0:8:24.08:0,24,336	0/0:9,0:9:24.08:0,24,336	0/0:9,0:9:27.09:0,27,378	0/0:26,0:26:72.20:0,72,970	0/0:22,0:22:63.20:0,63,865	0/0:23,0:23:69.22:0,69,949	0/0:10,0:10:27.09:0,27,375
chr10	24952913	.	CT	C	263.10	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=-3.888;DP=519;FS=0.969;HRun=8;HaplotypeScore=160.9025;InbreedingCoeff=0.6753;MQ=73.90;MQ0=0;MQRankSum=-0.617;QD=9.07;ReadPosRankSum=-0.435;VQSLOD=0.5982;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,15:16:19.26:354,19,0	0/0:4,0:4:8.87:0,9,60	0/0:13,0:13:21.57:0,22,286	0/1:13,0:12:3.77:4,0,134	0/0:36,0:36:76.36:0,76,479	0/0:23,0:23:61.70:0,62,384	0/0:20,0:20:55.67:0,56,346	0/0:26,0:26:63.18:0,63,343	0/0:15,0:15:38.21:0,38,240	0/0:18,0:18:45.45:0,45,236	0/0:22,0:22:46.95:0,47,289	0/0:13,0:13:32.22:0,32,193	0/0:21,0:21:55.75:0,56,340	0/0:21,0:21:58.77:0,59,360	0/0:27,0:26:73.46:0,73,462	0/0:12,0:12:32.24:0,32,198	0/0:16,0:16:42.13:0,42,507	0/0:17,0:17:39.12:0,39,471	0/0:19,0:19:50.76:0,51,615	0/0:21,0:21:57.16:0,57,677	0/0:5,0:5:15.05:0,15,181	0/0:21,0:21:52.87:0,53,331	0/0:24,0:24:61.71:0,62,385	0/0:7,0:7:20.54:0,21,126	0/0:27,0:27:72.93:0,73,426	0/0:23,0:23:60.20:0,60,321	0/0:28,0:28:76.27:0,76,460	0/0:11,0:11:26.65:0,27,182
chr10	24953607	.	A	AT	2495.85	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-11.399;DP=632;FS=0.000;HRun=9;HaplotypeScore=92.3034;InbreedingCoeff=0.9965;MQ=74.98;MQ0=0;MQRankSum=-0.178;QD=26.27;ReadPosRankSum=1.261;VQSLOD=3.5861;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:53.94:0,54,462	0/0:10,0:10:26.99:0,27,234	0/0:29,0:27:43.54:0,44,373	0/0:25,2:24:25.26:0,25,360	0/0:34,0:34:98.96:0,99,855	0/0:25,0:26:71.02:0,71,604	0/0:19,0:19:47.98:0,48,417	0/0:37,0:37:83.90:0,84,717	0/0:19,0:19:56.97:0,57,491	0/0:38,0:38:99:0,108,935	0/0:27,0:27:68.96:0,69,595	0/0:18,2:20:23.80:0,24,436	0/0:21,0:21:59.99:0,60,521	0/0:24,0:24:65.98:0,66,573	0/0:22,0:22:53.97:0,54,465	0/0:11,0:11:26.98:0,27,231	1/1:5,15:20:42.11:462,42,0	1/1:0,8:9:26.91:279,27,0	1/1:4,21:25:63.17:697,63,0	1/1:0,32:32:93.17:1000,93,0	1/1:1,8:9:21.06:232,21,0	0/0:16,0:16:44.99:0,45,391	0/0:21,0:21:59.98:0,60,521	0/0:8,0:8:21:0,21,182	0/0:31,0:31:77.97:0,78,677	0/0:32,0:32:83.96:0,84,729	0/0:26,0:27:64.97:0,65,548	0/0:17,0:17:47.98:0,48,417
chr10	24954046	.	GCAGA	G	4692.24	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-0.354;DP=385;FS=1.115;HRun=0;HaplotypeScore=73.5700;InbreedingCoeff=0.9023;MQ=61.39;MQ0=13;MQRankSum=-0.568;QD=19.47;ReadPosRankSum=1.031;VQSLOD=4.6206;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:32.90:0,33,264	1/1:5,0:5:14.79:152,15,0	0/0:26,0:13:22.33:0,22,259	0/0:56,0:27:29.09:0,29,347	1/1:0,1:17:23.62:159,24,0	1/1:0,0:15:2.96:19,3,0	1/1:11,2:12:35.84:291,36,0	1/1:17,0:17:38.38:328,38,0	1/1:9,0:8:23.90:194,24,0	1/1:11,0:11:26.16:268,26,0	1/1:20,0:20:48:420,48,0	1/1:9,0:9:23.87:188,24,0	1/1:10,1:11:29.90:268,30,0	1/1:1,12:13:5.93:50,6,0	1/1:8,0:8:24:211,24,0	1/1:9,0:9:26.87:234,27,0	0/0:9,0:9:20.38:0,20,154	0/0:6,0:5:11.99:0,12,115	0/0:9,0:9:23.53:0,24,213	0/0:15,0:14:35.54:0,36,322	0/0:6,0:5:11.96:0,12,95	1/1:17,0:17:47.75:420,48,0	1/1:11,0:11:29.98:254,30,0	1/1:17,0:17:37.49:324,37,0	1/1:11,0:11:33.01:313,33,0	1/1:9,0:9:24.50:223,24,0	1/1:9,1:11:32.77:287,33,0	1/1:5,1:5:1.50:89,1,0
chr10	24954123	.	G	GGA	216.17	PASS	AB=0.983;AC=14;AF=0.292;AN=48;BaseQRankSum=2.708;DP=304;FS=1.239;HRun=0;HaplotypeScore=59.5461;InbreedingCoeff=0.0968;MQ=26.06;MQ0=72;MQRankSum=-1.259;QD=1.63;ReadPosRankSum=-3.926;VQSLOD=0.6365;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:16:4.83:0,5,55	./.	./.	./.	0/0:6,0:5:0:0,0,0	1/1:8,0:6:1.55:4,2,0	0/1:19,0:13:10.66:92,0,11	0/0:12,0:8:15.23:0,15,131	1/1:9,6:10:2.70:35,3,0	0/1:10,0:5:14.55:15,0,54	0/1:11,0:7:0:0,0,0	0/1:12,0:8:4.42:4,0,57	0/1:13,1:9:44.74:77,0,45	0/0:8,0:5:6:0,6,56	0/1:11,0:7:0:0,0,0	0/0:7,0:4:0.48:0,0,23	0/0:18,0:13:17.06:0,17,198	0/0:7,0:4:8.53:0,9,88	0/0:13,0:6:18.06:0,18,248	0/0:17,0:11:2.86:0,3,22	0/0:16,0:7:3.01:0,3,49	./.	0/1:9,0:7:0:0,0,0	0/0:13,0:8:0:0,0,0	1/1:9,2:8:1.24:3,1,0	0/1:12,1:7:32.75:94,0,33	0/0:8,0:5:2.97:0,3,20	0/0:14,0:2:3.01:0,3,40
chr10	24954153	.	G	GGA	6196.92	PASS	AB=0.827;AC=37;AF=0.661;AN=56;BaseQRankSum=2.773;DP=474;FS=0.517;HRun=0;HaplotypeScore=80.1969;InbreedingCoeff=0.6897;MQ=50.82;MQ0=41;MQRankSum=2.492;QD=18.55;ReadPosRankSum=4.080;VQSLOD=4.9184;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:20:17.49:0,17,259	1/1:4,0:3:8.98:123,9,0	0/0:12,0:5:11.54:0,12,157	0/0:22,0:7:18.04:0,18,224	1/1:13,0:13:13.82:424,14,0	1/1:4,9:14:2.23:18,2,0	1/1:19,2:18:22.41:492,22,0	0/1:26,0:25:65.75:66,0,618	1/1:19,0:16:29.76:434,30,0	1/1:15,2:16:9.34:554,9,0	1/1:18,0:15:36.04:565,36,0	0/1:6,16:21:0:0,0,0	0/1:17,2:16:21.74:321,0,22	1/1:15,0:15:20.73:278,21,0	1/1:12,0:10:27.06:364,27,0	1/1:11,0:8:21.07:352,21,0	0/0:19,0:15:26.97:0,27,320	0/0:9,0:7:17.99:0,18,201	0/0:11,0:10:27.08:0,27,368	0/0:27,0:23:41.89:0,42,588	0/0:17,0:14:9.03:0,9,133	1/1:1,11:13:8.90:60,9,0	1/1:15,0:15:29.80:510,30,0	1/1:7,11:16:2.96:34,3,0	1/1:17,0:15:35.97:547,36,0	1/1:5,17:21:17.83:784,18,0	1/1:4,15:17:9.63:124,10,0	1/1:16,0:4:5.17:147,5,0
chr10	24954715	.	CTGTT	C	22623.44	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=15.978;DP=635;FS=1.928;HRun=0;HaplotypeScore=174.1193;InbreedingCoeff=0.9950;MQ=77.04;MQ0=0;MQRankSum=-15.058;QD=48.55;ReadPosRankSum=2.683;VQSLOD=5.1354;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:33.11:0,33,822	1/1:1,9:10:30.10:527,30,0	0/0:24,0:24:63.22:0,63,1602	0/0:19,0:19:54.18:0,54,1224	1/1:4,20:24:63.18:1110,63,0	1/1:5,18:22:54.18:995,54,0	1/1:3,12:15:42.14:782,42,0	1/1:7,26:33:90.30:1637,90,0	1/1:2,18:20:57.20:1051,57,0	1/1:6,28:34:87.29:1595,87,0	1/1:6,24:30:66.23:1230,66,0	1/1:2,23:25:72.25:1342,72,0	1/1:3,27:30:84.29:1565,84,0	1/1:5,27:32:84.29:1565,84,0	1/1:2,28:30:87.30:1622,87,0	1/1:3,17:20:54.19:1007,54,0	0/0:17,0:17:51.18:0,51,1357	0/0:7,0:7:21.07:0,21,550	0/0:16,0:16:42.13:0,42,987	0/0:33,0:33:96.33:0,96,2426	0/0:42,0:42:99:0,120,3129	1/1:2,14:16:45.15:825,45,0	1/1:6,17:23:54.18:994,54,0	1/1:1,10:11:17.38:334,17,0	1/1:0,20:20:60.21:1118,60,0	1/1:6,16:22:48.16:877,48,0	1/1:4,36:40:99:2179,117,0	1/1:4,4:8:15.05:269,15,0
chr10	24954738	.	AC	A	18031.24	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=17.201;DP=633;FS=1.466;HRun=1;HaplotypeScore=153.1773;InbreedingCoeff=0.9960;MQ=83.96;MQ0=0;MQRankSum=-14.195;QD=38.86;ReadPosRankSum=3.356;VQSLOD=4.4609;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:27.07:0,27,399	1/1:0,9:9:27.09:377,27,0	0/0:28,0:28:80.03:0,80,1217	0/0:23,0:23:63.21:0,63,971	1/1:0,25:25:72.15:961,72,0	1/1:0,23:23:60.20:838,60,0	1/1:0,16:16:45.15:629,45,0	1/1:0,27:27:81.27:1132,81,0	1/1:0,21:21:63.17:858,63,0	1/1:0,28:28:84.28:1174,84,0	1/1:0,21:21:57.15:773,57,0	1/1:0,25:25:66.18:899,66,0	1/1:1,36:37:99:1535,111,0	1/1:0,31:31:90.30:1257,90,0	1/1:1,31:32:90.26:1222,90,0	1/1:1,20:21:54.13:717,54,0	0/0:15,0:15:42.10:0,42,617	0/0:8,0:8:21.07:0,21,335	0/0:15,0:15:45.15:0,45,718	0/0:31,0:31:93.30:0,93,1464	0/0:40,0:40:99:0,117,1842	1/1:0,22:22:57.15:774,57,0	1/1:1,17:18:48.15:653,48,0	1/1:1,11:12:24.08:335,24,0	1/1:0,26:26:72.24:1005,72,0	1/1:0,22:22:66.22:922,66,0	1/1:0,43:43:99:1761,126,0	1/1:1,4:5:15.05:208,15,0
chr10	24955293	.	AC	A	501.34	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-3.714;DP=560;FS=1.990;HRun=4;HaplotypeScore=86.3218;InbreedingCoeff=0.9676;MQ=72.08;MQ0=1;MQRankSum=0.991;QD=26.39;ReadPosRankSum=-3.677;VQSLOD=1.4467;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:42.05:0,42,545	0/0:18,0:18:54.14:0,54,666	0/0:11,0:8:22.68:0,23,227	0/0:9,0:9:17.81:0,18,182	0/0:33,0:33:98.10:0,98,1217	0/0:21,0:21:63.17:0,63,781	0/0:7,0:7:21.06:0,21,260	1/1:1,18:19:54.10:596,54,0	0/0:15,0:15:42.11:0,42,516	0/0:29,0:29:87.24:0,87,1045	0/0:28,0:28:84.17:0,84,978	0/0:20,0:20:60.19:0,60,769	0/0:22,0:22:63.12:0,63,751	0/0:16,0:16:48.12:0,48,608	0/0:26,0:26:69.21:0,69,875	0/0:12,0:12:30.08:0,30,365	0/0:23,0:23:63.17:0,63,805	0/0:9,0:9:20.88:0,21,186	0/0:16,0:16:41.58:0,42,521	0/0:45,0:45:99:0,135,1732	0/0:8,0:8:19.97:0,20,267	0/0:22,0:22:63.17:0,63,781	0/0:31,0:31:87.21:0,87,1068	0/0:8,0:8:18.05:0,18,222	0/0:22,0:22:66.17:0,66,819	0/0:32,0:32:93.26:0,93,1127	0/0:27,0:27:81.19:0,81,991	0/0:15,0:15:36.10:0,36,452
chr10	24955813	.	AACACAC	A	123.03	PASS	AC=2;AF=0.037;AN=54;BaseQRankSum=-1.249;DP=464;FS=0.000;HRun=0;HaplotypeScore=123.8913;InbreedingCoeff=0.6009;MQ=63.57;MQ0=8;MQRankSum=-2.113;QD=4.39;ReadPosRankSum=-0.930;VQSLOD=2.2736;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:15.02:0,15,253	0/0:9,0:9:19.62:0,20,480	0/0:19,0:11:3.01:0,3,63	./.	0/0:29,0:28:47.12:0,47,1055	0/0:20,0:19:18.06:0,18,476	0/0:18,0:17:18.05:0,18,345	1/1:24,4:28:12.04:209,12,0	0/0:14,0:13:24.08:0,24,673	0/0:14,0:14:18.03:0,18,463	0/0:14,0:12:12.02:0,12,270	0/0:6,0:6:9.03:0,9,251	0/0:22,0:22:30.10:0,30,817	0/0:15,0:15:15.05:0,15,418	0/0:12,0:12:9.03:0,9,233	0/0:17,0:17:18.06:0,18,497	0/0:5,0:10:15.05:0,15,371	0/0:10,0:9:11.99:0,12,159	0/0:12,0:16:22.01:0,22,448	0/0:16,0:24:21.05:0,21,472	0/0:5,0:12:9.03:0,9,222	0/0:16,0:16:14.06:0,14,247	0/0:18,0:18:23.83:0,24,468	0/0:15,0:15:12.04:0,12,299	0/0:15,0:15:24.08:0,24,686	0/0:19,0:19:30.10:0,30,853	0/0:23,0:22:27.09:0,27,698	0/0:11,0:11:24.07:0,24,566
chr10	24955851	.	C	CATAT	7976.11	PASS	AB=0.916;AC=43;AF=0.768;AN=56;BaseQRankSum=-4.089;DP=490;FS=1.937;HRun=0;HaplotypeScore=108.6453;InbreedingCoeff=0.4043;MQ=64.75;MQ0=7;MQRankSum=0.365;QD=18.86;ReadPosRankSum=4.984;VQSLOD=4.6588;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:28.76:0,29,335	1/1:1,11:12:18.06:412,18,0	0/0:14,0:10:28.89:0,29,411	0/0:14,0:10:3.67:0,4,236	1/1:7,30:37:37.73:830,38,0	1/1:4,11:15:12.04:266,12,0	1/1:20,0:19:18.31:345,18,0	1/1:31,0:28:46.94:768,47,0	1/1:2,14:15:21.07:526,21,0	1/1:3,0:13:29.55:352,30,0	1/1:5,12:16:9.50:187,10,0	1/1:3,6:10:6.02:151,6,0	1/1:6,17:24:28.65:685,29,0	1/1:4,13:17:13.40:296,13,0	1/1:2,0:12:11.25:198,11,0	1/1:1,17:19:15.02:379,15,0	0/1:11,0:10:67.09:67,0,107	0/1:10,0:10:10.09:10,0,164	0/1:13,0:13:19.83:20,0,255	0/0:16,0:16:12.11:0,12,408	0/1:13,0:13:6.06:6,0,160	1/1:5,11:16:6.02:145,6,0	1/1:7,14:21:8.60:228,9,0	1/1:6,0:12:2.80:13,3,0	1/1:2,18:20:21.07:530,21,0	1/1:7,19:28:19.50:907,20,0	0/1:6,14:21:30.16:358,0,30	1/1:4,6:12:12.04:297,12,0
chr10	24956232	.	GA	G	9531.63	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=13.007;DP=573;FS=2.071;HRun=9;HaplotypeScore=71.3164;InbreedingCoeff=0.9491;MQ=68.10;MQ0=0;MQRankSum=-0.218;QD=23.89;ReadPosRankSum=5.995;VQSLOD=5.1420;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:25,1:26:41.72:0,42,724	1/1:1,11:12:1.40:267,1,0	0/0:6,0:6:14.07:0,14,138	0/0:13,0:12:26.46:0,26,255	1/1:6,32:38:58.43:789,58,0	1/1:2,14:16:7.42:322,7,0	1/1:1,12:13:36.02:330,36,0	0/0:28,0:28:72.19:0,72,813	1/1:1,17:18:45.02:412,45,0	1/1:1,23:24:69.02:625,69,0	1/1:1,25:26:66.02:604,66,0	1/1:2,15:17:38.30:356,38,0	1/1:0,23:23:66.04:604,66,0	1/1:1,20:21:54.03:494,54,0	1/1:1,18:20:53.06:473,53,0	1/1:0,19:19:57.03:522,57,0	0/0:24,0:24:72.17:0,72,806	0/0:7,0:7:21.06:0,21,240	0/0:22,0:22:60.13:0,60,650	0/0:36,0:36:94.82:0,95,1067	0/0:12,0:12:33.10:0,33,381	1/1:2,15:17:45.02:412,45,0	1/1:2,20:22:57.03:522,57,0	1/1:1,8:9:21:192,21,0	1/1:2,28:30:78.03:714,78,0	1/1:1,30:31:87.04:796,87,0	1/1:1,31:32:90.05:824,90,0	1/1:1,10:11:30.01:275,30,0
chr10	24957713	.	TAAA	T	9916.93	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=5.469;DP=562;FS=9.967;HRun=13;HaplotypeScore=102.4738;InbreedingCoeff=0.9680;MQ=70.93;MQ0=0;MQRankSum=-1.925;QD=25.89;ReadPosRankSum=5.467;VQSLOD=3.1556;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:20:42.59:0,43,707	1/1:0,7:7:18.05:219,18,0	0/0:25,0:17:27.01:0,27,339	0/0:15,0:12:15.51:0,16,231	1/1:7,25:32:66.08:803,66,0	1/1:2,17:19:42.10:511,42,0	1/1:3,15:18:36.07:438,36,0	0/0:11,0:34:77.81:0,78,718	1/1:3,12:16:36.03:419,36,0	1/1:5,28:34:87.11:1010,87,0	1/1:3,28:34:74.83:838,75,0	1/1:0,17:18:51.09:601,51,0	1/1:1,18:20:51.05:586,51,0	1/1:0,16:16:39.12:474,39,0	1/1:2,15:17:27.06:328,27,0	1/1:2,16:18:42.12:511,42,0	0/0:12,0:13:36.10:0,36,624	0/0:10,0:14:39.11:0,39,641	0/0:13,0:21:48.04:0,48,676	0/0:19,0:23:57.14:0,57,953	0/0:13,0:13:30.09:0,30,543	1/1:2,12:14:30.03:365,30,0	1/1:2,20:22:54.14:657,54,0	1/1:3,7:10:21.05:255,21,0	1/1:8,19:27:44.64:530,45,0	1/1:5,18:23:51.08:606,51,0	1/1:8,27:35:60.13:730,60,0	1/1:2,1:3:2.95:36,3,0
chr10	24959207	.	AG	A	982.24	PASS	AB=0.926;AC=19;AF=0.365;AN=52;BaseQRankSum=-2.150;DP=171;FS=1.939;HRun=9;HaplotypeScore=64.8768;InbreedingCoeff=0.5387;MQ=83.84;MQ0=0;MQRankSum=-1.703;QD=10.56;ReadPosRankSum=5.266;VQSLOD=2.3693;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,9:13:29.98:264,30,0	./.	0/1:13,1:11:15.78:16,0,76	0/1:9,2:11:24.73:56,0,25	0/0:6,0:6:6.73:0,7,43	0/0:5,0:5:6.31:0,6,35	0/0:3,0:4:11.85:0,12,78	1/1:3,3:5:6:54,6,0	0/0:6,0:6:9.97:0,10,55	0/0:1,0:1:2.90:0,3,16	1/1:2,0:2:0.47:1,0,0	0/0:7,0:7:4.17:0,4,12	0/0:2,0:3:4.19:0,4,21	0/0:5,0:5:5.28:0,5,28	0/0:3,0:4:5.80:0,6,41	0/0:10,0:10:23.81:0,24,177	1/1:3,6:8:12:110,12,0	1/1:0,8:8:18.01:164,18,0	1/1:1,4:5:12.01:110,12,0	1/1:1,5:6:14.97:129,15,0	1/1:8,9:16:29.80:247,30,0	0/0:3,0:3:6:0,6,54	0/1:2,0:2:0:0,0,0	0/0:4,0:5:2.09:0,2,5	0/0:5,0:6:7.02:0,7,33	0/0:5,0:5:6.30:0,6,35	0/0:7,0:7:11.82:0,12,97	./.
chr10	24959221	.	TA	T	2274.12	PASS	AB=0.640;AC=42;AF=0.808;AN=52;BaseQRankSum=1.403;DP=133;FS=3.687;HRun=3;HaplotypeScore=50.8647;InbreedingCoeff=0.3222;MQ=79.55;MQ0=1;MQRankSum=-3.356;QD=19.11;ReadPosRankSum=1.814;VQSLOD=3.3286;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,10:12:24.07:287,24,0	./.	0/0:9,0:6:8.66:0,9,79	0/1:6,2:8:55.83:69,0,56	0/1:2,3:4:0.45:0,0,0	1/1:0,5:5:12.04:144,12,0	1/1:0,4:4:11.96:103,12,0	1/1:0,7:5:15.05:185,15,0	1/1:0,5:5:14.77:136,15,0	1/1:1,0:1:3.01:35,3,0	0/0:0,3:3:0.47:0,0,1	1/1:1,2:3:5.80:48,6,0	1/1:0,2:2:3.01:34,3,0	0/1:3,4:7:6.32:85,0,6	1/1:1,1:2:5.23:40,5,0	1/1:4,5:9:22.05:165,22,0	1/1:1,7:7:15:166,15,0	1/1:2,4:6:15.05:184,15,0	1/1:1,5:6:18.04:200,18,0	1/1:0,5:5:15.05:181,15,0	1/1:2,10:11:9.03:110,9,0	1/1:1,0:1:1.82:5,2,0	0/0:0,2:2:0:0,0,0	0/1:0,1:1:0:0,0,0	1/1:1,3:4:9.03:111,9,0	1/1:0,1:1:3.01:37,3,0	1/1:4,1:5:9.94:60,10,0	./.
chr10	24959230	.	AT	A	383.10	PASS	AB=0.965;AC=39;AF=0.813;AN=48;BaseQRankSum=3.782;DP=133;FS=4.039;HRun=1;HaplotypeScore=57.5880;InbreedingCoeff=0.0810;MQ=77.11;MQ0=1;MQRankSum=-5.025;QD=2.92;ReadPosRankSum=4.369;VQSLOD=-0.0971;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:10,0:10:15.68:16,0,18	./.	0/1:6,0:5:1.54:2,0,45	0/1:6,0:6:16.19:16,0,76	1/1:3,0:2:4.19:13,4,0	0/1:10,0:10:11.36:11,0,12	1/1:4,0:4:5.85:17,6,0	1/1:7,0:5:4.73:11,5,0	1/1:4,1:5:11.88:64,12,0	./.	0/1:3,1:4:2.05:26,0,2	1/1:3,1:4:7.71:43,8,0	1/1:1,0:1:1.82:5,2,0	1/1:7,0:7:16.76:98,17,0	1/1:4,0:4:0.36:10,0,0	1/1:8,1:9:8.79:65,9,0	0/1:6,0:6:1.12:4,0,1	1/1:4,0:4:1.41:5,1,0	0/1:6,0:6:0.72:1,0,8	1/1:5,0:5:8.57:27,9,0	1/1:12,0:11:5.67:16,6,0	1/1:2,0:2:3.59:10,4,0	0/1:3,0:3:0.63:1,0,5	./.	1/1:4,0:4:6.34:17,6,0	0/1:4,0:4:1.94:2,0,5	1/1:3,0:3:6.29:19,6,0	./.
chr10	24959232	.	GA	G	3807.58	PASS	AB=0.800;AC=45;AF=0.938;AN=48;BaseQRankSum=-1.421;DP=126;FS=8.045;HRun=1;HaplotypeScore=43.2851;InbreedingCoeff=0.2859;MQ=72.19;MQ0=1;MQRankSum=-3.697;QD=32.27;ReadPosRankSum=3.019;VQSLOD=2.6009;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,10:10:21.07:293,21,0	./.	0/0:7,0:4:6.07:0,6,37	0/1:3,0:4:10.45:10,0,33	1/1:0,3:2:6.02:84,6,0	1/1:0,9:9:24.08:335,24,0	1/1:0,3:3:9.03:126,9,0	1/1:0,9:7:21.04:259,21,0	1/1:1,4:5:15.05:208,15,0	./.	1/1:1,3:4:5.76:83,6,0	1/1:1,3:4:9.03:124,9,0	1/1:0,1:1:3.01:42,3,0	1/1:1,6:7:21.07:287,21,0	1/1:0,4:4:12.04:168,12,0	1/1:1,7:8:21.07:290,21,0	1/1:0,5:5:12.04:168,12,0	1/1:0,4:4:12.04:168,12,0	1/1:0,6:6:18.06:251,18,0	1/1:0,4:4:12.04:167,12,0	1/1:0,12:11:9.03:126,9,0	1/1:0,2:2:6.02:84,6,0	1/1:0,3:3:5.53:83,6,0	./.	1/1:0,4:4:12.04:159,12,0	1/1:0,4:4:12.04:168,12,0	1/1:0,3:3:9.03:125,9,0	./.
chr10	24960756	.	CATGT	C	21404.33	PASS	AB=0.973;AC=49;AF=0.875;AN=56;BaseQRankSum=-0.574;DP=664;FS=4.160;HRun=0;HaplotypeScore=125.0410;InbreedingCoeff=0.8344;MQ=73.17;MQ0=1;MQRankSum=-6.168;QD=36.22;ReadPosRankSum=8.861;VQSLOD=4.4100;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:45.14:0,45,1093	1/1:1,14:14:30.10:526,30,0	0/0:29,0:29:72.16:0,72,1340	0/0:25,0:23:50.92:0,51,1087	1/1:0,24:24:51.17:894,51,0	1/1:3,23:26:51.17:894,51,0	1/1:2,15:17:30.10:524,30,0	0/1:35,1:36:47.94:171,0,48	1/1:2,15:17:39.13:683,39,0	1/1:3,27:30:78.24:1296,78,0	1/1:0,28:28:66.23:1140,66,0	1/1:0,26:26:60.21:1051,60,0	1/1:7,21:29:60.21:1050,60,0	1/1:2,16:18:45.15:788,45,0	1/1:2,19:21:51.17:894,51,0	1/1:4,24:28:66.23:1157,66,0	1/1:2,11:13:27.09:473,27,0	1/1:1,7:8:21.07:368,21,0	1/1:10,13:23:38.98:499,39,0	1/1:2,28:30:72.25:1259,72,0	1/1:4,28:32:66.23:1157,66,0	1/1:2,27:29:66.23:1156,66,0	1/1:5,27:32:63.21:1074,63,0	1/1:1,15:16:39.13:683,39,0	1/1:2,22:24:48.16:841,48,0	1/1:5,25:30:75.26:1303,75,0	1/1:8,23:31:63.22:1104,63,0	1/1:0,8:8:24.08:420,24,0
chr10	24960765	.	ATG	A	6195	PASS	AB=0.996;AC=35;AF=0.625;AN=56;BaseQRankSum=13.207;DP=655;FS=10.745;HRun=0;HaplotypeScore=153.1864;InbreedingCoeff=-0.1146;MQ=69.28;MQ0=1;MQRankSum=-6.461;QD=10.57;ReadPosRankSum=12.902;VQSLOD=2.1576;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:45.14:0,45,834	0/1:15,0:14:6.63:113,0,7	0/0:30,0:30:87.18:0,87,1363	0/0:20,0:18:50.93:0,51,868	1/1:25,0:25:48.41:249,48,0	0/1:25,0:25:21.29:190,0,21	0/1:16,0:17:6.71:111,0,7	1/1:1,33:34:99:1334,102,0	0/1:20,0:20:53.14:142,0,53	0/1:29,0:29:8.87:291,0,9	0/1:32,0:32:18.01:232,0,18	1/1:26,0:26:56.82:287,57,0	1/1:23,0:23:35.95:263,36,0	1/1:17,0:17:24.74:195,25,0	0/1:23,0:23:21.77:193,0,22	1/1:26,0:26:27.65:279,28,0	1/1:14,0:14:11.65:113,12,0	0/1:9,0:9:14.03:78,0,14	0/1:18,0:18:82.47:176,0,82	0/1:33,0:33:34.82:269,0,35	1/1:32,0:32:7.56:256,8,0	0/1:29,0:29:6.82:248,0,7	0/1:35,0:35:99:201,0,128	1/1:16,0:16:15.15:162,15,0	0/1:24,0:24:24.25:178,0,24	1/1:26,0:26:34.91:311,35,0	0/1:29,0:29:44.08:234,0,44	0/1:9,0:9:12.09:89,0,12
chr10	24963079	.	A	AGATGATATGAACGTGTACTTGGATG	1991.63	PASS	AB=0.750;AC=22;AF=0.917;AN=24;BaseQRankSum=-3.688;DP=46;FS=21.992;HRun=0;HaplotypeScore=34.7955;InbreedingCoeff=-0.2344;MQ=145.84;MQ0=0;MQRankSum=-2.019;QD=56.90;ReadPosRankSum=-0.673;VQSLOD=-0.0132;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/1:4,1:7:11.10:925,0,11	0/1:6,0:8:62.60:367,0,63	1/1:2,0:2:6.02:99,6,0	./.	1/1:2,0:2:6:64,6,0	1/1:3,0:3:6.02:127,6,0	./.	1/1:2,0:2:3.01:75,3,0	1/1:1,0:1:3:25,3,0	1/1:3,0:3:3.01:74,3,0	./.	1/1:3,0:3:6:98,6,0	./.	1/1:1,0:1:3:26,3,0	1/1:1,0:1:3:25,3,0	./.	./.	./.	./.	./.	./.	./.	./.	1/1:2,0:2:6.02:173,6,0	./.	./.
chr10	24964761	.	AG	A	3196.18	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=10.831;DP=522;FS=3.997;HRun=1;HaplotypeScore=48.0265;InbreedingCoeff=0.9951;MQ=93.76;MQ0=0;MQRankSum=-3.821;QD=37.16;ReadPosRankSum=0.624;VQSLOD=3.8420;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:45.13:0,45,691	0/0:15,0:15:45.14:0,45,698	0/0:26,0:26:75.17:0,75,1143	0/0:21,0:21:60.03:0,60,844	0/0:26,0:26:78.27:0,78,1241	0/0:13,0:13:39.13:0,39,623	0/0:11,0:11:33.10:0,33,501	0/0:27,0:27:78.25:0,78,1206	0/0:17,0:17:48.16:0,48,767	0/0:17,0:17:51.16:0,51,793	0/0:21,0:21:63.21:0,63,1007	0/0:24,0:24:72.25:0,72,1148	0/0:21,0:21:63.21:0,63,1007	0/0:26,0:26:78.27:0,78,1247	0/0:21,0:21:63.21:0,63,1003	0/0:15,0:15:42.14:0,42,669	1/1:0,14:14:33.11:461,33,0	1/1:0,7:7:21.07:291,21,0	1/1:0,21:21:63.21:878,63,0	1/1:0,25:25:75.22:1028,75,0	1/1:0,19:19:51.17:713,51,0	0/0:16,0:16:48.16:0,48,767	0/0:11,0:11:30.09:0,30,456	0/0:18,0:18:51.17:0,51,809	0/0:16,0:16:48.16:0,48,768	0/0:27,0:27:81.28:0,81,1292	0/0:27,0:27:81.26:0,81,1268	0/0:5,0:5:15.05:0,15,240
chr10	24968899	.	G	GA	7748.34	PASS	AB=0.579;AC=37;AF=0.661;AN=56;BaseQRankSum=7.964;DP=620;FS=0.375;HRun=9;HaplotypeScore=113.2510;InbreedingCoeff=0.8713;MQ=57.01;MQ0=9;MQRankSum=-0.377;QD=19.32;ReadPosRankSum=2.108;VQSLOD=4.3145;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,29:35:19.98:660,20,0	1/1:3,4:7:6.02:66,6,0	0/0:22,0:6:6.14:0,6,54	0/0:22,0:8:7.65:0,8,61	1/1:6,27:32:59.48:623,59,0	0/1:3,8:11:1.97:208,0,2	1/1:3,11:13:30.08:332,30,0	0/0:32,1:33:21.37:0,21,512	1/1:2,11:12:12.03:133,12,0	1/1:10,20:30:54.08:562,54,0	1/1:4,16:20:42.07:447,42,0	1/1:3,15:18:33.09:365,33,0	1/1:7,20:27:22.07:472,22,0	1/1:3,12:14:8.11:156,8,0	0/0:20,0:20:41.96:0,42,365	1/1:3,21:24:25:477,25,0	0/0:26,0:27:72.16:0,72,598	0/0:24,0:25:55.09:0,55,471	0/0:23,0:23:53.95:0,54,466	0/0:29,0:30:70.99:0,71,601	0/0:16,0:16:5.92:0,6,279	1/1:5,15:20:33.09:365,33,0	1/1:4,19:22:42.11:462,42,0	1/1:1,15:16:45.12:498,45,0	1/1:6,16:21:38.90:399,39,0	1/1:7,20:25:54.15:597,54,0	1/1:8,27:33:66.18:728,66,0	1/1:2,6:6:18.05:199,18,0
chr10	24968917	.	G	GA	955.54	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-7.592;DP=661;FS=7.424;HRun=10;HaplotypeScore=155.5505;InbreedingCoeff=0.9090;MQ=60.67;MQ0=5;MQRankSum=-1.177;QD=22.22;ReadPosRankSum=-2.688;VQSLOD=1.8117;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:61.36:0,61,517	0/0:8,0:8:14.96:0,15,119	0/0:27,0:9:17.86:0,18,148	0/0:27,0:13:17.14:0,17,130	0/0:27,1:27:9.82:0,10,478	0/0:14,0:14:35.92:0,36,291	0/0:17,0:16:35.95:0,36,294	1/1:12,31:43:99:1050,102,0	0/0:18,0:17:35.92:0,36,288	0/0:31,0:31:74.75:0,75,602	0/0:18,0:18:41.90:0,42,337	0/0:20,0:20:18.93:0,19,355	0/0:28,0:28:62.89:0,63,517	0/0:19,0:18:32.93:0,33,268	0/0:18,0:18:47.93:0,48,394	0/0:27,0:26:50.80:0,51,409	0/0:22,0:23:43.87:0,44,351	0/0:21,0:20:30.40:0,30,247	0/0:26,1:27:40.16:0,40,532	0/0:27,0:28:58.92:0,59,471	0/0:16,0:16:44.93:0,45,366	0/0:16,0:16:32.60:0,33,254	0/0:22,0:21:44.75:0,45,353	0/0:22,0:22:53.92:0,54,440	0/0:24,0:24:50.90:0,51,415	0/0:33,0:31:74.78:0,75,610	0/0:47,1:46:99:0,108,879	0/0:6,0:6:17.97:0,18,147
chr10	24969582	.	T	TA	1169.60	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-8.737;DP=721;FS=5.076;HRun=2;HaplotypeScore=64.5301;InbreedingCoeff=0.9998;MQ=82.67;MQ0=0;MQRankSum=0.183;QD=30.78;ReadPosRankSum=-5.417;VQSLOD=1.4693;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:84.17:0,84,968	0/0:15,0:15:45.13:0,45,545	0/0:35,0:34:77.27:0,77,902	0/0:15,0:15:35.94:0,36,346	0/0:31,0:31:90.09:0,90,1055	0/0:31,0:31:90.19:0,90,1065	0/0:16,0:16:45.11:0,45,531	1/1:2,36:38:99:1264,108,0	0/0:22,0:22:66.19:0,66,802	0/0:29,0:29:87.25:0,87,1048	0/0:21,0:21:63.19:0,63,768	0/0:40,0:40:99:0,117,1372	0/0:27,0:27:81.24:0,81,986	0/0:31,0:31:90.22:0,90,1052	0/0:28,0:28:84.19:0,84,982	0/0:33,0:33:96.28:0,96,1162	0/0:24,0:24:69.20:0,69,839	0/0:19,0:19:57.16:0,57,689	0/0:22,0:22:59.93:0,60,617	0/0:30,0:30:90.24:0,90,1074	0/0:20,0:20:57.12:0,57,663	0/0:19,0:19:54.16:0,54,657	0/0:26,0:26:72.21:0,72,876	0/0:26,0:26:75.18:0,75,896	0/0:27,0:27:75.18:0,75,909	0/0:20,0:20:57.16:0,57,685	0/0:26,0:26:75.22:0,75,913	0/0:19,0:19:54.06:0,54,645
chr10	24970568	.	GA	G	9434.10	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=14.116;DP=474;FS=2.259;HRun=6;HaplotypeScore=65.0089;InbreedingCoeff=0.9578;MQ=69.15;MQ0=0;MQRankSum=-0.764;QD=28.50;ReadPosRankSum=5.360;VQSLOD=5.2609;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,13:16:36.09:387,36,0	1/1:1,9:10:27.07:290,27,0	0/0:8,0:8:21.94:0,22,254	0/0:5,0:5:2.70:0,3,55	1/1:3,30:33:87.22:934,87,0	1/1:3,14:17:42.11:451,42,0	1/1:0,10:10:24.06:258,24,0	0/0:38,0:38:99:0,99,1296	1/1:0,11:11:27.07:290,27,0	1/1:2,24:26:69.17:742,69,0	1/1:0,18:18:54.14:579,54,0	1/1:1,17:18:51.13:548,51,0	1/1:2,28:30:78.20:838,78,0	1/1:0,16:16:48.12:516,48,0	0/0:20,0:20:57.14:0,57,728	1/1:0,18:18:42.11:451,42,0	0/0:12,0:12:33.09:0,33,417	0/0:15,0:15:45.15:0,45,591	0/0:14,0:14:39.12:0,39,496	0/0:23,0:23:66.21:0,66,854	0/0:8,0:8:15.05:0,15,197	1/1:0,8:8:24.06:258,24,0	1/1:1,19:20:51.13:548,51,0	1/1:0,10:10:30.08:322,30,0	1/1:1,15:16:45.11:484,45,0	1/1:0,23:23:69.15:731,69,0	1/1:3,25:28:65.96:709,66,0	1/1:0,3:3:9.02:97,9,0
chr10	24971123	.	G	GA	14527.06	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-6.449;DP=600;FS=0.000;HRun=5;HaplotypeScore=68.8237;InbreedingCoeff=0.9954;MQ=76.51;MQ0=0;MQRankSum=-0.418;QD=34.02;ReadPosRankSum=3.527;VQSLOD=5.1114;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,14:14:39.13:513,39,0	1/1:0,9:9:24.02:295,24,0	0/0:12,0:12:21.51:0,22,216	0/0:12,0:12:22.36:0,22,226	1/1:3,30:33:80.83:918,81,0	1/1:2,27:29:81.26:1056,81,0	1/1:0,12:12:30.10:395,30,0	0/0:33,0:33:87.20:0,87,923	1/1:2,17:19:45.15:588,45,0	1/1:0,24:24:72.22:932,72,0	1/1:2,27:29:81.22:1046,81,0	1/1:1,25:26:66.21:868,66,0	1/1:2,35:37:87.28:1145,87,0	1/1:1,18:19:51.17:670,51,0	0/0:35,0:35:99:0,102,1096	1/1:0,17:17:45.15:592,45,0	0/0:12,0:12:33.07:0,33,348	0/0:8,0:8:24.06:0,24,257	0/0:17,0:17:29.24:0,29,436	0/0:23,0:23:69.16:0,69,733	0/0:21,0:21:54.13:0,54,580	1/1:1,21:22:57.19:750,57,0	1/1:1,27:28:78.25:1025,78,0	1/1:0,10:10:27.09:355,27,0	1/1:0,36:36:90.29:1184,90,0	1/1:2,25:27:75.23:972,75,0	1/1:2,29:31:78.25:1026,78,0	1/1:0,5:5:15.05:197,15,0
chr10	24972500	.	AT	A	453.24	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.152;DP=571;FS=6.363;HRun=6;HaplotypeScore=55.0284;InbreedingCoeff=0.9254;MQ=85.02;MQ0=0;MQRankSum=-2.276;QD=20.60;ReadPosRankSum=0.427;VQSLOD=2.7594;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,18:22:51.12:548,51,0	0/0:6,0:6:18.06:0,18,237	0/0:18,1:19:15.95:0,16,539	0/0:16,0:16:46.01:0,46,543	0/0:29,0:29:84.26:0,84,1092	0/0:19,0:19:57.18:0,57,747	0/0:17,0:17:48.16:0,48,631	0/0:35,0:35:96.31:0,96,1263	0/0:18,0:18:42.12:0,42,536	0/0:30,0:30:84.27:0,84,1105	0/0:25,0:25:72.23:0,72,947	0/0:15,0:15:45.12:0,45,559	0/0:28,0:28:75.23:0,75,969	0/0:30,0:30:81.19:0,81,1017	0/0:21,0:21:63.19:0,63,815	0/0:32,0:32:96.31:0,96,1263	0/0:13,0:13:39.13:0,39,513	0/0:4,0:4:9.03:0,9,118	0/0:26,0:26:69.22:0,69,907	0/0:25,0:25:72.23:0,72,947	0/0:18,0:18:54.18:0,54,711	0/0:11,0:11:30.09:0,30,381	0/0:17,0:17:51.17:0,51,671	0/0:15,0:15:42.14:0,42,553	0/0:17,0:17:51.14:0,51,654	0/0:16,0:16:45.15:0,45,592	0/0:36,0:35:99:0,105,1377	0/0:11,0:11:27.09:0,27,355
chr10	24973148	.	C	CA	14454.48	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-2.111;DP=512;FS=21.401;HRun=7;HaplotypeScore=59.2568;InbreedingCoeff=0.9750;MQ=85.46;MQ0=0;MQRankSum=-8.364;QD=30.11;ReadPosRankSum=3.192;VQSLOD=3.2473;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,0:15:28.27:140,28,0	1/1:0,4:4:12.04:145,12,0	0/0:20,0:20:48.03:0,48,448	0/0:12,0:12:29.69:0,30,286	1/1:2,17:19:45.14:544,45,0	1/1:1,26:27:63.19:761,63,0	1/1:2,8:10:21.06:254,21,0	1/1:5,28:33:84.22:988,84,0	1/1:4,14:18:42.13:507,42,0	1/1:2,21:23:63.18:749,63,0	1/1:2,28:30:75.19:890,75,0	1/1:0,11:11:33.10:399,33,0	1/1:0,18:18:51.16:616,51,0	1/1:2,21:23:57.17:689,57,0	1/1:2,21:23:54.17:652,54,0	1/1:2,19:21:57.17:689,57,0	1/1:0,13:13:36.11:435,36,0	1/1:3,12:15:33.10:398,33,0	1/1:0,25:25:75.23:906,75,0	1/1:2,24:26:66.13:766,66,0	1/1:2,18:20:54.17:652,54,0	1/1:4,6:10:20.09:224,20,0	1/1:0,12:12:36.11:435,36,0	1/1:4,16:20:22.18:551,22,0	1/1:2,12:14:33.10:399,33,0	1/1:1,18:19:54.17:652,54,0	1/1:2,21:24:63.19:761,63,0	1/1:0,7:7:21.06:254,21,0
chr10	24973429	.	GTCTT	G	8937.58	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=11.818;DP=369;FS=1.366;HRun=0;HaplotypeScore=65.3175;InbreedingCoeff=0.9224;MQ=71.67;MQ0=0;MQRankSum=-1.656;QD=42.16;ReadPosRankSum=4.177;VQSLOD=4.9335;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:7:21.07:0,21,546	1/1:1,4:5:9.03:162,9,0	0/0:7,0:7:12.04:0,12,296	0/0:8,0:8:14.83:0,15,414	1/1:1,19:20:48.16:862,48,0	1/1:2,11:13:27.09:485,27,0	1/1:1,9:10:24.08:431,24,0	0/0:43,0:42:99:0,108,2616	1/1:1,4:5:9.03:162,9,0	1/1:1,17:18:54.16:890,54,0	1/1:5,22:27:51.17:916,51,0	1/1:0,7:7:12.04:216,12,0	1/1:0,9:9:24.08:431,24,0	1/1:2,13:15:30.10:539,30,0	0/0:12,0:12:27.09:0,27,702	1/1:0,10:10:21.07:377,21,0	0/0:15,0:15:42.14:0,42,1039	0/0:15,0:15:7.34:0,7,909	0/0:20,0:20:48.16:0,48,1236	0/0:22,0:22:66.23:0,66,1703	0/0:8,0:8:24.08:0,24,588	1/1:0,1:1:3.01:54,3,0	1/1:2,11:13:30.10:539,30,0	1/1:0,4:4:9.03:162,9,0	1/1:2,11:13:33.11:593,33,0	1/1:0,20:20:60.19:1041,60,0	1/1:0,11:11:27.09:485,27,0	1/1:0,11:11:33.11:593,33,0
chr10	24973562	.	CA	C	289.13	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=4.394;DP=370;FS=5.269;HRun=8;HaplotypeScore=36.7619;InbreedingCoeff=0.5555;MQ=63.16;MQ0=0;MQRankSum=0.131;QD=16.06;ReadPosRankSum=0.679;VQSLOD=2.9721;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:37.48:0,37,228	0/0:6,0:6:18.05:0,18,207	0/0:3,0:3:2.74:0,3,12	0/1:3,0:3:17.33:17,0,23	0/0:13,0:13:33.10:0,33,399	0/0:15,0:15:36.10:0,36,424	0/0:11,0:11:33.10:0,33,398	0/0:25,0:25:60.16:0,60,704	0/0:11,0:11:33.10:0,33,398	0/0:16,0:16:48.15:0,48,580	0/0:20,0:20:29.94:0,30,591	0/0:10,0:10:30.09:0,30,362	0/0:16,0:16:48.14:0,48,575	0/0:19,0:19:54.15:0,54,635	1/1:2,13:15:39.06:377,39,0	0/0:10,0:10:27.08:0,27,326	0/0:13,0:13:36.10:0,36,424	0/0:18,0:18:54.17:0,54,651	0/0:10,0:10:27.08:0,27,326	0/0:14,0:14:36.10:0,36,423	0/0:3,0:3:9.03:0,9,109	0/0:6,0:6:18.06:0,18,217	0/0:15,0:15:45.14:0,45,538	0/0:6,0:6:15.05:0,15,181	0/0:21,0:21:54.17:0,54,652	0/0:20,0:20:54.17:0,54,651	0/0:27,0:26:69.18:0,69,810	0/0:8,0:8:24.05:0,24,276
chr10	24973570	.	ATAT	A	539.75	PASS	AC=2;AF=0.037;AN=54;BaseQRankSum=4.926;DP=364;FS=0.000;HRun=0;HaplotypeScore=49.9952;InbreedingCoeff=0.8504;MQ=62.07;MQ0=0;MQRankSum=1.042;QD=28.41;ReadPosRankSum=0.495;VQSLOD=3.1477;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,19:19:39.13:634,39,0	0/0:5,0:5:15.05:0,15,329	./.	0/0:2,0:2:5.48:0,5,32	0/0:11,0:11:33.11:0,33,723	0/0:12,0:12:36.12:0,36,783	0/0:13,0:13:27.09:0,27,575	0/0:23,0:23:69.23:0,69,1436	0/0:12,0:12:33.11:0,33,706	0/0:17,0:17:51.18:0,51,1107	0/0:18,0:18:54.19:0,54,1178	0/0:11,0:11:33.11:0,33,720	0/0:18,0:18:48.15:0,48,987	0/0:19,0:19:57.20:0,57,1212	0/0:15,0:15:45.14:0,45,700	0/0:10,0:10:27.09:0,27,576	0/0:11,0:11:33.11:0,33,722	0/0:18,0:18:54.19:0,54,1183	0/0:10,0:10:30.09:0,30,578	0/0:15,0:15:39.13:0,39,803	0/0:5,0:5:15.05:0,15,309	0/0:7,0:7:21.07:0,21,444	0/0:15,0:15:45.15:0,45,986	0/0:7,0:7:15.05:0,15,329	0/0:18,0:18:51.18:0,51,1117	0/0:21,0:21:60.21:0,60,1278	0/0:22,0:21:57.20:0,57,1216	0/0:7,0:7:21.07:0,21,439
chr10	24975543	.	AT	A	721.46	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.565;DP=623;FS=1.661;HRun=5;HaplotypeScore=59.4044;InbreedingCoeff=0.9925;MQ=74.45;MQ0=0;MQRankSum=-0.403;QD=27.75;ReadPosRankSum=1.382;VQSLOD=3.8246;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,25:25:72.20:816,72,0	0/0:14,0:14:42.14:0,42,575	0/0:11,0:11:33.10:0,33,427	0/0:12,0:12:23.67:0,24,297	0/0:33,0:33:96.30:0,96,1284	0/0:18,0:18:54.14:0,54,717	0/0:17,0:17:51.16:0,51,683	0/0:40,0:40:99:0,114,1541	0/0:11,0:11:30.09:0,30,396	0/0:23,0:23:69.21:0,69,913	0/0:40,0:40:99:0,117,1598	0/0:23,0:23:63.17:0,63,827	0/0:33,0:33:96.31:0,96,1297	0/0:19,0:19:54.18:0,54,738	0/0:26,0:26:78.25:0,78,1052	0/0:24,0:24:66.22:0,66,903	0/0:19,0:19:45.12:0,45,596	0/0:12,0:12:33.11:0,33,451	0/0:14,0:14:39.13:0,39,530	0/0:38,0:38:99:0,108,1477	0/0:14,0:14:39.13:0,39,534	0/0:18,0:18:54.17:0,54,723	0/0:29,0:29:87.29:0,87,1190	0/0:15,0:15:39.13:0,39,533	0/0:25,0:25:75.24:0,75,999	0/0:31,0:31:87.28:0,87,1177	0/0:31,0:31:84.28:0,84,1149	0/0:7,0:7:21.07:0,21,287
chr10	24975655	.	GA	G	5465.34	PASS	AB=0.553;AC=39;AF=0.696;AN=56;BaseQRankSum=8.607;DP=508;FS=0.455;HRun=13;HaplotypeScore=58.9483;InbreedingCoeff=0.8231;MQ=73.40;MQ0=0;MQRankSum=-0.081;QD=13.43;ReadPosRankSum=1.440;VQSLOD=5.2527;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,0:18:19.87:58,20,0	1/1:2,8:10:20.87:153,21,0	1/1:9,2:10:8.89:64,9,0	0/0:9,0:8:7.36:0,7,66	1/1:3,14:18:40.76:290,41,0	1/1:6,14:20:41.70:302,42,0	1/1:2,8:11:22.01:157,22,0	1/1:8,1:39:62.90:194,63,0	1/1:3,16:19:12.57:255,13,0	1/1:2,19:25:33.59:382,34,0	0/1:4,16:21:5.98:243,0,6	1/1:5,13:21:17.67:234,18,0	1/1:1,22:23:62.64:460,63,0	1/1:3,20:25:32.51:393,33,0	0/0:23,0:23:48.07:0,48,462	1/1:8,24:32:62.58:456,63,0	0/0:11,0:11:30.05:0,30,292	0/0:10,0:10:23.99:0,24,224	0/0:15,0:15:24.01:0,24,220	0/0:18,1:21:35.23:0,35,454	0/0:9,0:10:23.86:0,24,213	1/1:4,10:14:29.78:218,30,0	1/1:2,20:22:27.33:365,27,0	1/1:1,4:6:10.98:72,11,0	1/1:3,9:12:0.65:168,1,0	1/1:4,27:31:68.42:497,68,0	1/1:2,26:29:53.04:503,53,0	0/0:2,0:2:0:0,0,0
chr10	24976856	.	A	AGTC	2841.29	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=9.080;DP=696;FS=0.582;HRun=0;HaplotypeScore=100.1852;InbreedingCoeff=0.9696;MQ=71.59;MQ0=0;MQRankSum=-4.242;QD=66.08;ReadPosRankSum=1.573;VQSLOD=5.1964;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,42:43:99:2936,126,0	0/0:11,0:11:33.09:0,33,527	0/0:20,0:20:54.15:0,54,854	0/0:15,0:15:42.09:0,42,650	0/0:33,0:33:99:0,99,1658	0/0:26,0:26:75.26:0,75,1316	0/0:26,0:26:75.25:0,75,1291	0/0:26,0:26:75.23:0,75,1220	0/0:25,0:25:75.24:0,75,1294	0/0:21,0:21:60.19:0,60,1009	0/0:25,0:25:72.22:0,72,1215	0/0:24,0:24:72.20:0,72,1186	0/0:27,0:27:78.25:0,78,1341	0/0:36,0:36:99:0,105,1824	0/0:32,0:32:96.33:0,96,1688	0/0:29,0:29:81.28:0,81,1425	0/0:28,0:28:81.24:0,81,1361	0/0:9,0:10:30.03:0,30,464	0/0:20,0:20:57.17:0,57,928	0/0:35,0:35:99:0,105,1794	0/0:24,0:24:72.23:0,72,1231	0/0:17,0:17:49.97:0,50,823	0/0:26,0:26:75.26:0,75,1321	0/0:34,0:34:96.33:0,96,1688	0/0:24,0:24:69.22:0,69,1171	0/0:27,0:27:81.27:0,81,1403	0/0:28,0:27:84.27:0,84,1447	0/0:4,0:4:12.04:0,12,212
chr10	24977006	.	G	GTT	855.05	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=3.736;DP=611;FS=11.016;HRun=10;HaplotypeScore=84.8049;InbreedingCoeff=0.7404;MQ=75.33;MQ0=1;MQRankSum=2.027;QD=13.57;ReadPosRankSum=-4.511;VQSLOD=0.0795;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,16:19:23.07:409,23,0	0/0:9,0:9:17.98:0,18,183	0/0:13,0:13:8.97:0,9,91	0/1:12,0:11:15.95:16,0,93	0/0:26,0:27:65.82:0,66,652	0/0:26,0:27:59.41:0,59,718	0/0:20,0:21:50.79:0,51,490	1/1:32,0:32:66.34:559,66,0	0/0:15,0:15:45.08:0,45,450	0/0:23,0:23:66.12:0,66,659	0/0:20,0:20:54.07:0,54,541	0/0:21,0:21:54.08:0,54,542	0/0:33,0:33:84.13:0,84,845	0/0:25,0:25:69.08:0,69,686	0/0:29,0:28:78.14:0,78,793	0/0:32,0:32:78.09:0,78,779	0/0:26,0:26:66.03:0,66,652	0/0:14,0:14:36.06:0,36,366	0/0:24,0:25:62.69:0,63,598	0/0:22,0:22:51.03:0,51,513	0/0:20,0:19:48.09:0,48,485	0/0:7,0:7:11.97:0,12,116	0/0:22,0:23:56.82:0,57,559	0/0:13,0:13:30.05:0,30,302	0/0:33,0:34:83.71:0,84,819	0/0:25,0:25:62.84:0,63,639	0/0:39,0:39:81.89:0,82,914	0/0:5,0:5:12.02:0,12,122
chr10	24977016	.	T	TTA	1379.91	PASS	AB=0.900;AC=5;AF=0.089;AN=56;BaseQRankSum=-3.712;DP=611;FS=6.854;HRun=0;HaplotypeScore=84.8042;InbreedingCoeff=0.7440;MQ=72.65;MQ0=1;MQRankSum=1.874;QD=25.09;ReadPosRankSum=-3.815;VQSLOD=3.3126;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:18:10.10:193,10,0	0/0:9,0:9:24.03:0,24,297	0/0:12,0:12:14.17:0,14,195	0/1:8,0:8:13.52:14,0,86	0/0:30,0:30:90.11:0,90,1067	0/0:30,0:30:82.46:0,82,1079	0/0:19,0:19:57.07:0,57,699	1/1:0,28:28:84.18:1296,84,0	0/0:17,0:17:51.15:0,51,677	0/0:24,0:24:72.15:0,72,915	0/0:22,0:22:41.91:0,42,721	0/0:21,0:21:63.07:0,63,795	0/0:34,0:34:98.93:0,99,1184	0/0:27,0:27:74.63:0,75,940	0/0:32,0:31:93.23:0,93,1207	0/0:27,0:28:81.22:0,81,1089	0/0:24,0:24:72.16:0,72,943	0/0:16,0:16:46.83:0,47,563	0/0:25,0:25:74.99:0,75,911	0/0:22,0:22:60.13:0,60,777	0/0:17,0:16:47.60:0,48,609	0/0:6,0:6:18.01:0,18,197	0/0:21,0:21:59.94:0,60,741	0/0:12,0:12:33.09:0,33,441	0/0:35,0:35:99:0,99,1256	0/0:27,0:27:55.54:0,56,851	0/0:41,0:41:99:0,120,1414	0/0:5,0:5:12.04:0,12,159
chr10	24979420	.	TA	T	14276.32	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=13.069;DP=606;FS=6.383;HRun=1;HaplotypeScore=61.5743;InbreedingCoeff=0.9981;MQ=87.18;MQ0=0;MQRankSum=-1.975;QD=38.07;ReadPosRankSum=3.746;VQSLOD=5.4413;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:63.21:0,63,982	1/1:0,9:9:24.08:336,24,0	0/0:18,0:18:24.23:0,24,744	0/0:22,0:22:34.85:0,35,838	1/1:0,21:21:63.17:858,63,0	1/1:0,33:33:90.30:1258,90,0	1/1:0,13:13:33.11:461,33,0	0/0:40,0:40:99:0,120,1805	1/1:0,16:16:33.11:461,33,0	1/1:0,27:27:81.25:1114,81,0	1/1:0,13:13:36.08:480,36,0	1/1:0,23:23:66.22:923,66,0	1/1:0,27:27:78.05:1089,78,0	1/1:0,18:18:51.17:711,51,0	0/0:27,0:27:81.28:0,81,1267	1/1:0,25:25:63.21:881,63,0	0/0:17,0:17:48.16:0,48,750	0/0:12,0:12:36.10:0,36,536	0/0:23,0:23:69.23:0,69,1067	0/0:24,0:24:72.23:0,72,1103	0/0:26,0:26:78.27:0,78,1216	1/1:0,23:23:60.11:795,60,0	1/1:0,22:22:60.20:839,60,0	1/1:0,22:22:66.22:923,66,0	1/1:0,23:23:57.19:797,57,0	1/1:0,21:21:60.14:799,60,0	1/1:0,33:33:93.31:1299,93,0	1/1:0,6:6:18.06:252,18,0
chr10	24980051	.	A	ATGG	2390.65	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-7.615;DP=670;FS=11.831;HRun=0;HaplotypeScore=111.9203;InbreedingCoeff=0.9990;MQ=81.86;MQ0=0;MQRankSum=-5.155;QD=62.91;ReadPosRankSum=-5.194;VQSLOD=3.0538;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:57.20:0,57,1002	0/0:12,0:12:36.12:0,36,635	0/0:21,0:21:60.21:0,60,1043	0/0:16,0:16:33.22:0,33,725	0/0:31,0:31:90.31:0,90,1571	0/0:31,0:31:87.30:0,87,1528	0/0:15,0:15:45.14:0,45,766	1/1:8,28:38:99:2486,111,0	0/0:24,0:24:72.23:0,72,1231	0/0:23,0:23:63.22:0,63,1112	0/0:26,0:26:75.24:0,75,1295	0/0:23,0:23:69.20:0,69,1129	0/0:32,0:32:96.33:0,96,1682	0/0:32,0:32:93.30:0,93,1613	0/0:32,0:32:96.33:0,96,1689	0/0:23,0:23:66.20:0,66,1104	0/0:22,0:22:63.19:0,63,1080	0/0:22,0:22:60.21:0,60,1058	0/0:14,0:14:39.13:0,39,688	0/0:32,0:32:96.33:0,96,1694	0/0:23,0:23:69.24:0,69,1206	0/0:24,0:24:72.22:0,72,1216	0/0:23,0:23:66.21:0,66,1132	0/0:10,0:10:30.10:0,30,526	0/0:28,0:28:84.27:0,84,1444	0/0:21,0:21:63.21:0,63,1083	0/0:37,0:37:99:0,105,1791	0/0:15,0:15:45.15:0,45,794
chr10	24980554	.	AT	A	1077.29	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=1.835;DP=518;FS=4.002;HRun=6;HaplotypeScore=68.8677;InbreedingCoeff=0.9784;MQ=70.17;MQ0=0;MQRankSum=1.153;QD=24.48;ReadPosRankSum=-3.853;VQSLOD=1.7948;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:2,8:10:21.05:226,21,0	0/0:8,0:8:21.07:0,21,276	0/0:10,0:10:27.06:0,27,322	0/0:9,0:9:16.29:0,16,196	0/0:30,0:30:84.26:0,84,1083	0/0:25,0:25:69.22:0,69,907	0/0:11,0:11:33.11:0,33,434	1/1:3,31:34:93.17:972,93,0	0/0:17,0:17:45.11:0,45,548	0/0:24,0:24:72.21:0,72,909	0/0:25,0:25:72.23:0,72,945	0/0:15,0:15:39.12:0,39,500	0/0:18,0:18:51.15:0,51,656	0/0:16,0:16:48.16:0,48,631	0/0:22,0:22:63.20:0,63,828	0/0:22,0:22:63.20:0,63,829	0/0:17,0:17:51.17:0,51,670	0/0:8,0:8:24.08:0,24,316	0/0:17,0:17:42.14:0,42,553	0/0:26,0:26:75.23:0,75,972	0/0:8,0:8:24.08:0,24,316	0/0:5,0:5:15.05:0,15,197	0/0:24,0:24:72.21:0,72,919	0/0:14,0:14:36.12:0,36,474	0/0:26,0:26:75.24:0,75,987	0/0:36,0:36:99:0,105,1368	0/0:31,0:31:87.23:0,87,1112	0/0:10,0:10:27.09:0,27,355
chr10	24982682	.	C	CCA	903.25	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-5.709;DP=579;FS=4.235;HRun=0;HaplotypeScore=69.6802;InbreedingCoeff=0.9670;MQ=93.16;MQ0=0;MQRankSum=-2.362;QD=33.45;ReadPosRankSum=0.692;VQSLOD=5.7454;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,22:27:60.20:998,60,0	0/0:8,0:8:24.06:0,24,295	0/0:36,0:36:86.45:0,86,1129	0/0:26,0:26:60.12:0,60,724	0/0:30,0:30:63.18:0,63,782	0/0:22,0:22:60.19:0,60,771	0/0:21,0:21:54.01:0,54,670	0/0:25,0:25:57.18:0,57,733	0/0:12,0:12:36.12:0,36,463	0/0:25,0:25:69.22:0,69,888	0/0:22,0:22:54.18:0,54,694	0/0:20,0:20:54.16:0,54,681	0/0:22,0:22:66.21:0,66,848	0/0:22,0:22:63.20:0,63,811	0/0:26,0:26:75.24:0,75,965	0/0:21,0:21:54.18:0,54,695	0/0:19,0:19:54.15:0,54,669	0/0:14,0:14:36.12:0,36,463	0/0:11,0:11:27.07:0,27,332	0/0:24,0:24:54.18:0,54,695	0/0:20,0:20:54.17:0,54,681	0/0:18,0:18:48.16:0,48,617	0/0:15,0:15:42.14:0,42,540	0/0:18,0:18:48.16:0,48,618	0/0:24,0:24:66.16:0,66,816	0/0:20,0:20:57.17:0,57,718	0/0:27,0:27:66.21:0,66,849	0/0:4,0:4:12.01:0,12,126
chr10	24982974	.	TTTTTG	T	10528.99	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-6.489;DP=573;FS=0.460;HRun=0;HaplotypeScore=122.1790;InbreedingCoeff=0.9514;MQ=65.76;MQ0=3;MQRankSum=0.946;QD=30.61;ReadPosRankSum=3.727;VQSLOD=4.8233;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:15.25:0,15,770	1/1:2,7:9:21.07:385,21,0	0/0:18,0:10:8.24:0,8,167	0/0:22,0:15:12.02:0,12,193	1/1:8,18:26:42.10:734,42,0	1/1:6,16:22:30.10:550,30,0	1/1:8,9:17:12.04:220,12,0	0/0:27,0:24:21.49:0,21,200	1/1:3,10:13:21.07:385,21,0	1/1:11,20:31:63.17:1113,63,0	1/1:13,13:26:35.99:555,36,0	1/1:6,14:20:33.11:605,33,0	1/1:6,18:24:51.17:935,51,0	1/1:5,10:15:24.08:440,24,0	0/0:6,0:20:33.11:0,33,721	1/1:4,14:18:30.10:550,30,0	0/0:10,0:31:48.14:0,48,980	0/0:7,0:18:26.24:0,26,491	0/0:15,0:22:27:0,27,384	0/0:16,0:29:51.12:0,51,962	0/0:6,0:17:27.09:0,27,590	1/1:2,14:16:36.12:658,36,0	1/1:9,10:19:27.09:495,27,0	1/1:4,7:11:9.03:165,9,0	1/1:7,16:23:36.12:660,36,0	1/1:4,18:22:54.18:978,54,0	1/1:5,21:25:54.19:990,54,0	1/1:2,4:6:6.02:110,6,0
chr10	24983999	.	CA	C	1112.15	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=8.478;DP=806;FS=3.715;HRun=5;HaplotypeScore=84.9231;InbreedingCoeff=0.9358;MQ=61.64;MQ0=0;MQRankSum=0.098;QD=27.80;ReadPosRankSum=-4.633;VQSLOD=1.5827;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,102,1394	0/0:17,0:17:45.15:0,45,616	0/0:36,1:28:65.37:0,65,750	0/0:27,0:20:9.50:0,9,525	0/0:38,0:38:99:0,105,1435	0/0:33,0:33:96.32:0,96,1310	0/0:25,0:25:75.25:0,75,1022	1/1:1,39:40:99:1207,113,0	0/0:19,0:19:54.17:0,54,722	0/0:34,0:34:93.29:0,93,1241	0/0:22,0:22:60.20:0,60,819	0/0:29,0:29:84.28:0,84,1149	0/0:41,0:41:99:0,114,1545	0/0:29,0:29:87.29:0,87,1190	0/0:32,0:32:93.31:0,93,1271	0/0:32,0:32:93.30:0,93,1257	0/0:22,0:22:54.17:0,54,736	0/0:16,0:16:45.15:0,45,608	0/0:19,0:18:51.16:0,51,678	0/0:37,0:37:99:0,108,1460	0/0:28,0:28:81.27:0,81,1107	0/0:28,0:28:81.26:0,81,1092	0/0:33,0:33:87.29:0,87,1189	0/0:21,0:21:60.20:0,60,821	0/0:31,0:31:87.27:0,87,1166	0/0:30,0:30:90.30:0,90,1230	0/0:44,0:44:99:0,126,1698	0/0:6,0:6:15.01:0,15,184
chr10	24985109	.	C	CTACATACA	13458.32	PASS	AC=48;AF=0.960;AN=50;BaseQRankSum=-1.082;DP=586;FS=1.348;HRun=0;HaplotypeScore=161.9380;InbreedingCoeff=0.5543;MQ=59.43;MQ0=3;MQRankSum=-3.254;QD=25.78;ReadPosRankSum=-0.541;VQSLOD=4.1919;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:27:38.94:340,39,0	1/1:3,3:7:9.03:366,9,0	./.	./.	1/1:23,9:32:17.92:649,18,0	1/1:8,0:23:32.93:270,33,0	1/1:10,0:14:11.98:99,12,0	1/1:47,0:47:17.98:195,18,0	1/1:6,4:13:15.03:512,15,0	1/1:18,13:32:51.17:1838,51,0	1/1:15,7:22:18.06:731,18,0	1/1:12,8:22:15.05:609,15,0	1/1:15,8:23:18.06:731,18,0	1/1:12,3:16:9.03:365,9,0	0/0:15,0:15:27.09:0,27,645	1/1:15,7:22:9.03:366,9,0	1/1:15,4:20:12.04:398,12,0	1/1:13,3:17:6.02:237,6,0	1/1:14,1:15:18.02:474,18,0	1/1:20,15:35:39.13:1561,39,0	./.	1/1:9,5:15:12.04:460,12,0	1/1:7,7:15:18.06:715,18,0	1/1:10,2:13:6.02:233,6,0	1/1:16,10:27:18.06:731,18,0	1/1:17,8:26:33.11:1218,33,0	1/1:17,0:28:29.58:239,30,0	1/1:10,0:10:3.01:122,3,0
chr10	24985620	.	TA	T	7810	PASS	AB=0.872;AC=39;AF=0.696;AN=56;BaseQRankSum=3.839;DP=628;FS=1.981;HRun=10;HaplotypeScore=77.3075;InbreedingCoeff=0.8899;MQ=69.79;MQ0=1;MQRankSum=0.134;QD=17.75;ReadPosRankSum=6.089;VQSLOD=5.2442;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,0:33:52.42:164,52,0	1/1:2,9:11:26.99:234,27,0	0/1:29,5:24:83.73:84,0,238	0/0:21,0:14:24.69:0,25,241	1/1:4,28:32:74.96:650,75,0	1/1:7,21:28:62.96:547,63,0	1/1:2,17:19:35.99:313,36,0	0/0:36,1:37:64.13:0,64,922	1/1:4,20:24:50.89:443,51,0	1/1:3,17:20:53.98:468,54,0	1/1:2,13:15:32.98:287,33,0	1/1:0,16:16:44.99:390,45,0	1/1:1,22:23:59.98:521,60,0	1/1:5,17:22:41.21:346,41,0	0/0:25,0:24:60.16:0,60,664	1/1:1,20:21:50.98:443,51,0	0/0:26,0:26:72.18:0,72,788	0/0:14,0:14:39.05:0,39,411	0/0:27,0:30:77.86:0,78,812	0/0:26,0:26:46.80:0,47,738	0/0:9,0:9:21.05:0,21,224	1/1:2,17:19:50.99:442,51,0	1/1:1,21:22:50.98:443,51,0	1/1:4,13:17:38.99:339,39,0	1/1:4,16:20:3.67:251,4,0	1/1:2,25:27:44.77:613,45,0	1/1:1,24:25:65.99:573,66,0	1/1:2,10:12:29.98:260,30,0
chr10	24985781	.	CT	C	1643.08	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=9.650;DP=638;FS=12.526;HRun=1;HaplotypeScore=61.0377;InbreedingCoeff=0.8497;MQ=90.80;MQ0=0;MQRankSum=-2.230;QD=37.34;ReadPosRankSum=-3.832;VQSLOD=1.3160;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:75.26:0,75,1196	0/0:8,0:8:24.08:0,24,384	0/0:26,0:26:78.22:0,78,1184	0/0:24,0:24:69.19:0,69,1053	0/0:28,0:27:84.26:0,84,1294	0/0:31,0:31:93.32:0,93,1472	0/0:28,0:28:84.29:0,84,1343	1/1:0,44:44:99:1738,129,0	0/0:29,0:29:87.26:0,87,1319	0/0:20,0:20:60.20:0,60,959	0/0:11,0:11:33.11:0,33,528	0/0:21,0:21:63.21:0,63,1007	0/0:25,0:25:72.23:0,72,1115	0/0:22,0:22:66.19:0,66,984	0/0:22,0:22:66.22:0,66,1041	0/0:24,0:24:72.22:0,72,1126	0/0:26,0:25:78.24:0,78,1220	0/0:11,0:11:33.11:0,33,527	0/0:14,0:14:39.13:0,39,617	0/0:21,0:21:63.21:0,63,1007	0/0:28,0:28:84.27:0,84,1291	0/0:21,0:21:63.20:0,63,966	0/0:16,0:16:48.16:0,48,767	0/0:22,0:22:66.23:0,66,1054	0/0:28,0:28:84.29:0,84,1331	0/0:30,0:30:90.29:0,90,1397	0/0:29,0:29:87.28:0,87,1366	0/0:1,0:1:2.98:0,3,21
chr10	24986710	.	A	AT	12589.64	PASS	AB=0.563;AC=49;AF=0.875;AN=56;BaseQRankSum=-7.851;DP=531;FS=3.487;HRun=9;HaplotypeScore=47.2232;InbreedingCoeff=0.7602;MQ=71.35;MQ0=1;MQRankSum=-2.622;QD=25.18;ReadPosRankSum=3.169;VQSLOD=5.5493;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:2,0:13:23.65:0,24,68	1/1:0,6:6:18.05:199,18,0	0/0:12,0:12:22.58:0,23,217	0/0:6,0:6:6.76:0,7,71	1/1:4,34:38:96.10:1008,96,0	1/1:1,20:21:54.15:597,54,0	1/1:2,4:6:6.02:66,6,0	1/1:6,30:36:90.16:949,90,0	1/1:4,22:26:60.16:664,60,0	1/1:3,19:22:51.14:564,51,0	1/1:2,27:30:80.97:850,81,0	1/1:3,17:20:48.13:531,48,0	1/1:5,25:30:66.18:730,66,0	1/1:1,19:20:48.13:531,48,0	1/1:5,15:20:39.11:431,39,0	1/1:3,14:17:39.11:431,39,0	1/1:1,10:12:29.91:313,30,0	0/1:2,7:9:8.01:148,0,8	1/1:5,16:21:48.13:531,48,0	1/1:8,23:32:68.95:718,69,0	1/1:1,7:8:18.05:199,18,0	1/1:1,19:20:31.10:571,31,0	1/1:1,17:18:48.13:531,48,0	1/1:1,5:6:12.03:133,12,0	1/1:1,12:14:32.92:346,33,0	1/1:5,26:31:32.10:803,32,0	1/1:4,22:26:8.05:545,8,0	1/1:4,6:10:18.05:199,18,0
chr10	24987038	.	TC	T	943.62	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.474;DP=633;FS=7.496;HRun=2;HaplotypeScore=63.6816;InbreedingCoeff=0.9808;MQ=69.60;MQ0=0;MQRankSum=-0.729;QD=33.70;ReadPosRankSum=-3.220;VQSLOD=2.1406;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:69.22:0,69,1012	0/0:13,0:13:36.12:0,36,539	0/0:16,0:15:42.14:0,42,629	0/0:24,0:24:62.78:0,63,849	0/0:23,0:23:69.20:0,69,971	0/0:25,0:25:75.24:0,75,1102	0/0:23,0:23:69.22:0,69,1011	1/1:0,28:28:81.25:1038,81,0	0/0:19,0:19:57.14:0,57,828	0/0:26,0:26:78.26:0,78,1153	0/0:21,0:21:63.20:0,63,925	0/0:24,0:24:72.24:0,72,1059	0/0:31,0:31:90.30:0,90,1346	0/0:35,0:35:99:0,105,1544	0/0:33,0:33:99:0,99,1484	0/0:33,0:33:99:0,99,1424	0/0:11,0:11:33.07:0,33,445	0/0:14,0:14:21.77:0,22,425	0/0:16,0:16:48.16:0,48,718	0/0:35,0:35:99:0,105,1551	0/0:20,0:20:60.20:0,60,899	0/0:25,0:25:75.25:0,75,1124	0/0:18,0:18:54.11:0,54,777	0/0:16,0:16:45.15:0,45,671	0/0:24,0:24:72.24:0,72,1065	0/0:23,0:23:69.23:0,69,1033	0/0:28,0:28:84.28:0,84,1254	0/0:5,0:5:15.05:0,15,221
chr10	24990025	.	A	AT	1220.56	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-4.300;DP=416;FS=1.385;HRun=8;HaplotypeScore=65.1739;InbreedingCoeff=0.9702;MQ=71.44;MQ0=0;MQRankSum=-0.640;QD=21.04;ReadPosRankSum=-1.226;VQSLOD=3.2159;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:18:42.57:209,43,0	0/0:8,0:8:20.25:0,20,159	0/0:8,0:7:14.16:0,14,149	0/0:17,0:16:29.23:0,29,225	0/0:22,0:22:65.55:0,66,571	0/0:28,0:28:84.03:0,84,763	0/0:14,0:14:38.66:0,39,335	1/1:6,34:40:99:1133,102,0	0/0:12,0:12:33.02:0,33,302	0/0:19,0:19:53.99:0,54,493	0/0:14,0:14:33.01:0,33,302	0/0:11,0:11:27.01:0,27,247	0/0:10,0:10:30.02:0,30,274	0/0:10,0:10:29.81:0,30,259	0/0:15,0:15:42:0,42,380	0/0:12,0:12:33.02:0,33,302	0/0:14,0:14:42.01:0,42,380	0/0:11,0:11:29.85:0,30,263	0/0:19,0:18:51.01:0,51,463	0/0:17,0:17:42.02:0,42,384	0/0:6,0:6:17.99:0,18,159	0/0:9,0:9:24.01:0,24,219	0/0:13,0:13:38.89:0,39,344	0/0:6,0:6:14.91:0,15,126	0/0:19,0:19:54.02:0,54,490	0/0:15,0:15:41.92:0,42,369	0/0:22,0:22:56.60:0,57,498	0/0:7,0:7:21.01:0,21,192
chr10	24990033	.	T	TTGA	950.84	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-3.221;DP=441;FS=17.715;HRun=0;HaplotypeScore=89.2830;InbreedingCoeff=0.9472;MQ=76.84;MQ0=0;MQRankSum=-3.285;QD=45.28;ReadPosRankSum=-1.567;VQSLOD=3.5330;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,16:21:45.15:1046,45,0	0/0:7,0:7:20.99:0,21,179	0/0:11,0:10:15.03:0,15,335	0/0:20,0:19:43.35:0,43,587	0/0:26,0:26:69.32:0,69,600	0/0:29,0:29:84.85:0,85,723	0/0:16,0:16:39.32:0,39,333	0/0:40,0:40:83.16:0,83,634	0/0:15,0:15:27.15:0,27,272	0/0:20,0:20:53.36:0,53,430	0/0:13,0:13:35.47:0,35,286	0/0:10,0:10:26.96:0,27,225	0/0:13,0:13:30.25:0,30,262	0/0:11,0:11:28.39:0,28,253	0/0:14,0:14:42.14:0,42,704	0/0:14,0:14:34.21:0,34,280	0/0:15,0:15:45.13:0,45,712	0/0:12,0:12:34.67:0,35,545	0/0:18,0:18:51.17:0,51,857	0/0:17,0:17:45.14:0,45,738	0/0:6,0:6:18.04:0,18,279	0/0:9,0:9:25.22:0,25,203	0/0:15,0:15:41.12:0,41,351	0/0:6,0:6:14.53:0,15,134	0/0:20,0:20:56.43:0,56,459	0/0:15,0:15:42.35:0,42,335	0/0:21,0:21:33.11:0,33,456	0/0:7,0:7:21.01:0,21,188
chr10	24990661	.	A	AAC	23125.56	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-14.018;DP=627;FS=5.532;HRun=0;HaplotypeScore=68.4537;InbreedingCoeff=0.9932;MQ=81.31;MQ0=0;MQRankSum=-2.184;QD=48.79;ReadPosRankSum=2.705;VQSLOD=6.0310;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,22:23:60.21:1138,60,0	1/1:0,7:7:15.05:284,15,0	0/0:21,0:21:59.76:0,60,811	0/0:11,0:12:17.90:0,18,261	1/1:1,30:31:90.14:1635,90,0	1/1:2,21:23:51.17:985,51,0	1/1:2,16:18:42.14:811,42,0	1/1:2,32:35:99:1894,102,0	1/1:0,20:21:48.16:927,48,0	1/1:2,22:25:69.24:1317,69,0	1/1:1,19:20:51.17:958,51,0	1/1:1,21:23:57.19:1071,57,0	1/1:2,34:37:99:1892,99,0	1/1:0,29:29:78.27:1506,78,0	0/0:23,0:23:66.20:0,66,988	1/1:3,13:16:30.01:577,30,0	0/0:20,0:20:51.13:0,51,755	0/0:21,0:21:60.20:0,60,919	0/0:15,0:15:42.14:0,42,642	0/0:28,0:28:81.28:0,81,1240	0/0:13,0:13:36.11:0,36,532	1/1:3,17:20:51.17:979,51,0	1/1:1,29:30:72.25:1391,72,0	1/1:0,21:21:60.21:1158,60,0	1/1:2,22:25:57.20:1101,57,0	1/1:0,35:35:99:2020,105,0	1/1:1,26:27:63.22:1216,63,0	1/1:0,7:7:15.05:265,15,0
chr10	24991648	.	TG	T	526.23	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.336;DP=597;FS=12.759;HRun=1;HaplotypeScore=95.9133;InbreedingCoeff=0.9902;MQ=72.90;MQ0=0;MQRankSum=-6.506;QD=23.92;ReadPosRankSum=0.298;VQSLOD=2.4217;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,22:22:53.94:621,54,0	0/0:12,0:12:36.12:0,36,535	0/0:15,0:15:36.09:0,36,497	0/0:11,0:11:30.09:0,30,413	0/0:21,0:21:63.13:0,63,914	0/0:18,0:18:51.17:0,51,756	0/0:19,0:19:57.04:0,57,766	0/0:33,0:33:96.25:0,96,1292	0/0:21,0:21:60.19:0,60,873	0/0:38,0:38:99:0,108,1539	0/0:29,0:29:84.23:0,84,1207	0/0:28,0:28:84.11:0,84,1198	0/0:20,0:20:60.17:0,60,847	0/0:23,0:23:63.09:0,63,871	0/0:29,0:29:87.23:0,87,1261	0/0:21,0:21:60.13:0,60,867	0/0:26,0:26:72.20:0,72,1051	0/0:10,0:10:27.09:0,27,400	0/0:19,0:19:54.13:0,54,762	0/0:16,0:16:45.13:0,45,653	0/0:29,0:29:78.19:0,78,1137	0/0:25,0:25:69.67:0,70,991	0/0:13,0:13:36.10:0,36,517	0/0:15,0:15:42.04:0,42,550	0/0:23,0:23:69.22:0,69,1012	0/0:19,0:19:57.18:0,57,831	0/0:36,0:36:99:0,108,1586	0/0:6,0:6:18.06:0,18,268
chr10	24991850	.	G	GA	632.76	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-7.011;DP=508;FS=0.000;HRun=10;HaplotypeScore=232.4035;InbreedingCoeff=0.6381;MQ=61.61;MQ0=0;MQRankSum=-1.605;QD=19.77;ReadPosRankSum=-3.996;VQSLOD=0.2223;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:20.90:0,21,165	0/0:7,0:9:22.84:0,23,167	0/0:12,0:12:7.52:0,8,50	0/0:7,0:9:0.06:0,0,29	0/0:23,1:24:25.03:0,25,398	0/0:16,0:17:40.94:0,41,320	0/0:14,0:14:32.84:0,33,258	1/1:12,20:32:74.85:727,75,0	0/0:15,0:14:26.83:0,27,212	0/0:30,0:30:62.85:0,63,508	0/0:24,1:26:13.33:0,13,333	0/0:16,0:18:42.93:0,43,322	0/0:18,0:18:50.79:0,51,400	0/0:20,0:21:55.76:0,56,423	0/0:28,0:28:68.44:0,68,512	0/0:18,0:18:47.51:0,48,359	0/0:11,0:12:26.41:0,26,179	0/0:3,0:3:5.95:0,6,43	0/0:11,0:11:20.93:0,21,172	0/0:32,0:34:66.86:0,67,521	0/0:8,0:8:14.57:0,15,115	0/0:20,1:21:28.19:0,28,344	0/0:21,1:22:22.84:0,23,384	0/0:12,0:12:20.63:0,21,142	0/0:27,0:27:74.77:0,75,604	0/0:11,0:11:26.95:0,27,221	0/0:43,0:43:99:0,104,867	0/0:4,0:4:11.41:0,11,75
chr10	24992166	.	G	GT	509.67	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=0.890;DP=611;FS=2.036;HRun=7;HaplotypeScore=61.7786;InbreedingCoeff=0.9930;MQ=86.24;MQ0=0;MQRankSum=-0.597;QD=24.27;ReadPosRankSum=-2.884;VQSLOD=2.7696;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:45.07:0,45,434	0/0:8,0:8:24.04:0,24,232	0/0:32,0:32:66.03:0,66,621	0/0:12,0:12:22.67:0,23,193	0/0:28,0:28:69.07:0,69,654	0/0:29,0:29:81.09:0,81,770	0/0:15,0:15:42.05:0,42,399	1/1:3,18:21:51.14:605,51,0	0/0:23,0:23:63.09:0,63,608	0/0:28,0:28:78.10:0,78,746	0/0:27,0:27:57.08:0,57,550	0/0:21,0:21:60.10:0,60,579	0/0:31,0:31:87.13:0,87,840	0/0:18,0:18:45.06:0,45,434	0/0:29,0:29:84.14:0,84,811	0/0:22,0:22:60.07:0,60,573	0/0:29,0:29:87.14:0,87,840	0/0:20,0:20:60.10:0,60,579	0/0:15,0:15:39.06:0,39,377	0/0:31,0:31:81.12:0,81,782	0/0:14,0:14:42.07:0,42,406	0/0:29,0:29:69.08:0,69,659	0/0:18,0:18:42.06:0,42,405	0/0:16,0:17:50.11:0,50,469	0/0:23,0:23:60.08:0,60,574	0/0:22,0:22:63.10:0,63,608	0/0:25,0:25:69.08:0,69,659	0/0:8,0:8:24.04:0,24,232
chr10	24992641	.	A	AT	734.08	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-5.832;DP=702;FS=6.986;HRun=5;HaplotypeScore=64.5104;InbreedingCoeff=0.9966;MQ=81.50;MQ0=0;MQRankSum=-3.031;QD=31.92;ReadPosRankSum=-0.028;VQSLOD=4.0925;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,23:23:63.20:829,63,0	0/0:11,0:11:30.08:0,30,322	0/0:19,0:19:45.06:0,45,461	0/0:17,0:17:24.53:0,25,377	0/0:40,0:40:99:0,111,1178	0/0:26,0:26:78.18:0,78,829	0/0:21,0:21:63.16:0,63,677	0/0:32,0:32:84.21:0,84,903	0/0:18,0:18:48.12:0,48,516	0/0:32,0:32:90.22:0,90,962	0/0:20,0:20:60.15:0,60,645	0/0:22,0:22:63.16:0,63,677	0/0:25,0:25:75.19:0,75,804	0/0:33,0:33:96.22:0,96,1023	0/0:27,0:27:78.19:0,78,838	0/0:26,0:26:72.16:0,72,766	0/0:44,0:44:99:0,117,1226	0/0:25,0:25:69.15:0,69,730	0/0:28,0:28:69.16:0,69,735	0/0:35,0:35:99:0,99,1064	0/0:20,0:20:57.14:0,57,613	0/0:28,0:28:84.21:0,84,903	0/0:17,0:17:48.10:0,48,507	0/0:20,0:20:54.11:0,54,570	0/0:25,0:25:75.17:0,75,798	0/0:30,1:31:53.76:0,54,928	0/0:28,0:28:78.18:0,78,830	0/0:9,0:9:27.07:0,27,290
chr10	24994706	.	AT	A	2064.46	PASS	AB=0.762;AC=16;AF=0.286;AN=56;BaseQRankSum=5.138;DP=475;FS=9.661;HRun=10;HaplotypeScore=58.7229;InbreedingCoeff=0.8121;MQ=66.13;MQ0=2;MQRankSum=-0.976;QD=13.58;ReadPosRankSum=-0.017;VQSLOD=2.6259;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:54.13:0,54,587	0/0:9,0:9:27.07:0,27,299	0/0:12,0:11:24.03:0,24,249	0/0:7,0:6:15:0,15,146	0/0:23,0:23:63.14:0,63,680	0/0:17,0:17:45.10:0,45,482	0/1:5,1:6:11.02:11,0,118	1/1:11,0:33:43.73:129,44,0	0/0:15,0:15:39.11:0,39,431	0/0:25,0:25:69.19:0,69,763	0/0:20,0:20:48.07:0,48,509	0/0:14,0:14:39.11:0,39,431	0/0:17,0:17:51.14:0,51,562	0/0:15,0:15:39.07:0,39,413	1/1:3,17:20:41.98:365,42,0	0/0:16,0:16:42.07:0,42,451	1/1:4,23:27:62.96:547,63,0	1/1:3,16:19:47.97:417,48,0	1/1:5,14:19:41.98:365,42,0	1/1:4,14:18:8.81:305,9,0	1/1:2,4:6:11.98:104,12,0	0/1:1,1:2:20.04:20,0,27	0/0:18,0:18:39.09:0,39,423	0/0:11,0:12:32.92:0,33,346	0/0:24,0:23:54.15:0,54,597	0/0:20,0:20:48.13:0,48,531	0/0:23,0:22:51.13:0,51,555	0/0:15,0:15:30.08:0,30,332
chr10	24995134	.	CTT	C	1229.18	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.693;DP=632;FS=17.721;HRun=9;HaplotypeScore=76.2140;InbreedingCoeff=0.9951;MQ=76.57;MQ0=1;MQRankSum=3.449;QD=26.15;ReadPosRankSum=-5.132;VQSLOD=0.5265;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:93.20:0,93,1415	0/0:8,0:8:21.07:0,21,343	0/0:24,0:24:48.82:0,49,782	0/0:15,0:13:29.08:0,29,398	0/0:26,0:26:72.25:0,72,1180	0/0:18,0:18:39.12:0,39,593	0/0:22,0:22:60.20:0,60,985	1/1:8,39:47:99:1324,114,0	0/0:18,0:18:51:0,51,768	0/0:25,0:25:72.25:0,72,1177	0/0:20,0:20:60.20:0,60,976	0/0:25,0:25:75.23:0,75,1182	0/0:27,0:27:78.25:0,78,1256	0/0:22,0:22:60.20:0,60,975	0/0:21,0:21:63.17:0,63,1003	0/0:23,0:23:66.23:0,66,1080	0/0:35,0:35:96.33:0,96,1565	0/0:17,0:16:45.14:0,45,714	0/0:15,0:16:44.62:0,45,653	0/0:28,0:28:81.28:0,81,1321	0/0:15,0:15:42.08:0,42,572	0/0:14,0:14:39.12:0,39,617	0/0:20,0:20:48.16:0,48,786	0/0:28,0:28:84.28:0,84,1355	0/0:17,0:17:45.15:0,45,739	0/0:22,0:22:60.19:0,60,942	0/0:26,0:26:75.23:0,75,1182	0/0:19,0:19:51.08:0,51,687
chr10	24998360	.	G	GAA	8435	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=6.357;DP=512;FS=8.525;HRun=11;HaplotypeScore=87.8254;InbreedingCoeff=0.9319;MQ=76.23;MQ0=8;MQRankSum=-3.038;QD=24.96;ReadPosRankSum=0.676;VQSLOD=4.2361;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:12:23.22:0,23,232	1/1:2,15:18:44.63:602,45,0	0/0:17,0:16:20.62:0,21,184	0/0:19,0:19:38.96:0,39,354	1/1:4,22:27:63.78:781,64,0	1/1:4,16:20:39.13:550,39,0	1/1:3,12:16:35.61:487,36,0	0/0:9,0:20:24.79:0,25,108	1/1:2,14:16:33.11:478,33,0	1/1:7,15:23:43.42:549,43,0	1/1:8,21:31:63.57:836,64,0	1/1:3,7:12:20.56:264,21,0	1/1:3,12:17:32.59:427,33,0	1/1:4,10:17:28.28:341,28,0	0/0:14,0:14:42.07:0,42,407	1/1:4,10:14:1:362,1,0	0/0:17,0:16:39:0,39,378	0/0:11,0:11:30.03:0,30,285	0/0:17,0:21:10.46:0,10,354	0/0:27,0:27:56.94:0,57,543	0/0:15,0:15:35.99:0,36,349	1/1:2,10:16:35.59:436,36,0	1/1:15,11:28:29.90:654,30,0	1/1:0,12:12:29.59:400,30,0	1/1:3,17:21:32.60:433,33,0	1/1:4,12:16:36.09:468,36,0	1/1:6,14:20:26.83:361,27,0	1/1:3,1:4:2.50:9,2,0
chr10	24998559	.	TA	T	8357.06	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=10.392;DP=452;FS=5.169;HRun=8;HaplotypeScore=45.1856;InbreedingCoeff=0.9903;MQ=76.89;MQ0=0;MQRankSum=0.108;QD=25.48;ReadPosRankSum=5.194;VQSLOD=5.1365;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,17:18:45.07:435,45,0	1/1:0,7:7:21.03:203,21,0	0/0:10,0:10:13.58:0,14,127	0/0:8,0:8:18.05:0,18,214	1/1:2,22:24:66.04:626,66,0	1/1:2,19:21:57.09:550,57,0	1/1:0,7:7:18.03:174,18,0	0/0:25,0:25:63.19:0,63,752	1/1:1,12:13:36.06:348,36,0	1/1:3,20:23:60.07:572,60,0	1/1:2,16:18:48:451,48,0	1/1:0,10:10:30.05:290,30,0	1/1:2,22:24:57.09:550,57,0	1/1:1,16:17:45.02:425,45,0	0/0:15,0:15:39.11:0,39,460	1/1:0,13:13:36.06:348,36,0	0/0:10,0:10:24.07:0,24,289	0/0:11,0:11:33.10:0,33,398	0/0:12,0:12:36.11:0,36,435	0/0:20,0:20:54.15:0,54,641	0/0:13,0:13:36.11:0,36,435	1/1:2,19:21:57.09:550,57,0	1/1:2,22:24:66.11:637,66,0	1/1:1,6:7:15.02:145,15,0	1/1:2,20:22:57.09:551,57,0	1/1:1,18:19:54.08:517,54,0	1/1:4,20:24:54.08:521,54,0	1/1:0,16:16:48.08:464,48,0
chr10	24998892	.	C	CT	781.59	PASS	AB=0.974;AC=7;AF=0.125;AN=56;BaseQRankSum=-2.097;DP=539;FS=1.406;HRun=10;HaplotypeScore=54.4254;InbreedingCoeff=0.6437;MQ=68.61;MQ0=0;MQRankSum=-0.212;QD=8.98;ReadPosRankSum=-3.411;VQSLOD=1.3590;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,15:18:39.05:403,39,0	0/0:9,0:9:20.95:0,21,169	0/1:20,0:14:3.73:4,0,81	0/1:6,0:3:0:0,0,0	0/0:32,0:32:89.83:0,90,732	0/0:24,0:24:65.92:0,66,542	0/0:11,0:11:17.96:0,18,148	1/1:15,16:31:7.85:488,8,0	0/1:11,1:12:5.04:5,0,170	0/0:17,0:17:41.94:0,42,343	0/0:16,0:16:38.94:0,39,318	0/0:17,0:19:34.97:0,35,277	0/0:20,0:20:47.90:0,48,391	0/0:15,0:15:12.63:0,13,248	0/0:18,0:18:35.88:0,36,289	0/0:23,0:23:41.17:0,41,425	0/0:12,0:12:32.96:0,33,271	0/0:20,0:20:40.17:0,40,441	0/0:21,0:22:55.96:0,56,449	0/0:25,0:26:64.94:0,65,523	0/0:17,0:17:44.93:0,45,369	0/0:15,0:15:35.95:0,36,296	0/0:25,0:25:62.92:0,63,517	0/0:11,0:11:23.94:0,24,197	0/0:23,0:23:65.91:0,66,542	0/0:30,0:32:90.97:0,91,726	0/0:32,0:31:68.91:0,69,566	0/0:13,0:13:35.96:0,36,296
chr10	24998903	.	CA	C	240.33	PASS	AB=1.000;AC=4;AF=0.071;AN=56;BaseQRankSum=5.352;DP=512;FS=6.452;HRun=9;HaplotypeScore=55.2206;InbreedingCoeff=0.5456;MQ=73.04;MQ0=0;MQRankSum=0.311;QD=5.11;ReadPosRankSum=-0.204;VQSLOD=0.1825;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:42.06:0,42,465	0/0:8,0:8:21.06:0,21,242	0/1:22,0:17:15.09:15,0,107	0/1:8,0:5:0.13:0,0,21	0/0:35,0:36:99:0,102,1140	0/0:22,0:22:60.15:0,60,673	0/0:9,0:9:27.07:0,27,302	0/0:23,0:23:38.47:0,38,618	0/0:10,0:10:27.08:0,27,311	0/0:17,0:17:48.14:0,48,553	0/0:15,0:15:33.09:0,33,373	0/0:15,0:15:36.10:0,36,407	0/0:16,0:16:48.14:0,48,554	0/0:17,0:17:45.12:0,45,505	1/1:1,15:16:35.99:329,36,0	0/0:22,0:22:54.05:0,54,605	0/0:13,0:13:39.07:0,39,426	0/0:21,0:21:51.06:0,51,558	0/0:20,0:20:54.16:0,54,617	0/0:25,0:25:72.15:0,72,790	0/0:17,0:17:42.12:0,42,485	0/0:13,0:13:33.10:0,33,381	0/0:23,0:23:63.19:0,63,727	0/0:10,0:10:30.09:0,30,346	0/0:22,0:22:54.16:0,54,623	0/0:35,0:35:99:0,99,1130	0/0:26,0:26:75.21:0,75,857	0/0:12,0:12:36.11:0,36,415
chr10	25000611	.	C	CT	17352.68	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-7.287;DP=636;FS=30.031;HRun=8;HaplotypeScore=55.5933;InbreedingCoeff=0.9661;MQ=75.67;MQ0=0;MQRankSum=-6.973;QD=28.54;ReadPosRankSum=4.345;VQSLOD=3.1529;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,37:39:99:1212,105,0	1/1:1,8:10:9.16:290,9,0	0/0:16,0:16:35.01:0,35,298	0/0:12,0:12:23.96:0,24,212	1/1:3,33:36:87.26:1004,87,0	1/1:3,26:29:72.21:831,72,0	1/1:6,17:23:48.14:554,48,0	1/1:4,28:32:81.17:890,81,0	1/1:2,15:17:42.12:485,42,0	1/1:1,22:23:66.20:762,66,0	1/1:1,17:18:51.11:574,51,0	1/1:4,18:22:48.14:554,48,0	1/1:3,24:27:60.18:692,60,0	1/1:3,21:24:57.17:658,57,0	1/1:1,16:17:45.13:519,45,0	1/1:1,17:18:48.14:554,48,0	1/1:4,31:36:90.10:1019,90,0	1/1:2,16:18:48.14:552,48,0	1/1:8,23:32:47.54:759,48,0	1/1:1,23:24:66.08:718,66,0	1/1:1,26:27:69.21:796,69,0	1/1:1,18:20:54.16:618,54,0	1/1:2,17:19:48.14:554,48,0	1/1:4,14:18:33.10:381,33,0	1/1:3,19:22:29.70:596,30,0	1/1:2,22:24:66.18:751,66,0	1/1:3,23:27:72.21:824,72,0	1/1:0,6:6:18.05:208,18,0
chr10	25001846	.	CA	C	458.49	PASS	AC=26;AF=0.722;AN=36;BaseQRankSum=2.470;DP=123;FS=3.183;HRun=2;HaplotypeScore=7.2302;InbreedingCoeff=0.3234;MQ=22.72;MQ0=28;MQRankSum=-0.995;QD=9.97;ReadPosRankSum=-0.332;VQSLOD=1.2165;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:3:6.02:0,6,86	./.	./.	./.	./.	1/1:0,2:2:3.01:37,3,0	1/1:4,1:3:2.94:18,3,0	./.	1/1:1,1:2:3.01:37,3,0	1/1:0,2:1:3.01:37,3,0	1/1:2,1:2:3.01:37,3,0	./.	./.	1/1:0,5:5:3.01:37,3,0	0/0:5,0:3:3.01:0,3,44	1/1:0,4:3:6.02:74,6,0	0/0:11,0:3:3.01:0,3,44	./.	./.	0/0:7,0:1:3.01:0,3,43	0/0:6,0:1:2.97:0,3,20	1/1:0,2:1:3.01:37,3,0	1/1:1,4:5:3.01:37,3,0	1/1:1,3:3:3.01:37,3,0	1/1:3,1:1:3.01:37,3,0	1/1:2,2:2:3.01:37,3,0	1/1:0,4:4:9.03:111,9,0	./.
chr10	25005349	.	CTA	C	452.93	PASS	AB=0.853;AC=10;AF=0.263;AN=38;BaseQRankSum=4.701;DP=1061;FS=0.000;HRun=0;HaplotypeScore=19.4399;InbreedingCoeff=-0.3694;MQ=10.67;MQ0=867;MQRankSum=0.627;QD=1.28;ReadPosRankSum=1.520;VQSLOD=0.7863;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	0/0:111,2:2:3.01:0,3,58	./.	./.	0/0:97,4:7:6.02:0,6,115	0/1:15,8:12:61.64:62,0,432	./.	./.	0/1:10,4:6:41.65:126,0,42	0/1:45,5:10:15.67:16,0,471	0/1:133,0:2:0:0,0,0	0/0:18,0:5:9.03:0,9,173	0/0:15,2:7:15.05:0,15,289	0/1:17,2:11:27.80:28,0,271	0/1:11,3:7:79.67:80,0,103	0/1:12,4:7:73.67:74,0,194	0/0:14,0:6:6.02:0,6,115	0/0:11,0:3:9.03:0,9,173	./.	./.	./.	0/0:53,2:7:6.02:0,6,115	0/0:86,1:6:3.01:0,3,58	./.	0/0:91,1:5:3.01:0,3,58	0/1:16,3:6:30.84:31,0,216	0/1:26,11:11:70.22:70,0,266	0/1:27,2:5:48.75:83,0,49
chr10	25011373	.	GGA	G	2938.99	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=11.172;DP=594;FS=2.642;HRun=0;HaplotypeScore=70.1537;InbreedingCoeff=0.9967;MQ=85.03;MQ0=0;MQRankSum=0.734;QD=34.99;ReadPosRankSum=1.234;VQSLOD=5.8630;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:48.16:0,48,860	0/0:6,0:6:18.06:0,18,323	0/0:28,0:28:67.47:0,67,1205	0/0:22,0:22:50.74:0,51,801	0/0:38,0:38:99:0,105,1799	0/0:32,0:32:93.32:0,93,1666	0/0:10,0:10:30.09:0,30,504	0/0:26,0:26:72.22:0,72,1179	0/0:19,0:19:57.18:0,57,966	0/0:29,0:29:81.25:0,81,1321	0/0:25,0:25:75.24:0,75,1314	0/0:23,0:23:69.18:0,69,1103	0/0:22,0:22:66.21:0,66,1150	0/0:18,0:18:54.14:0,54,871	0/0:18,0:18:54.12:0,54,904	0/0:16,0:16:45.14:0,45,760	1/1:0,17:17:39.13:546,39,0	1/1:0,7:7:21.07:294,21,0	1/1:1,18:19:54.14:701,54,0	1/1:1,27:28:81.23:1111,81,0	1/1:1,12:13:33.11:462,33,0	0/0:22,0:22:60.21:0,60,1072	0/0:24,0:24:63.20:0,63,1098	0/0:9,0:9:27.09:0,27,484	0/0:26,0:25:78.25:0,78,1365	0/0:31,0:31:90.29:0,90,1537	0/0:34,0:34:96.33:0,96,1712	0/0:14,0:14:42.12:0,42,696
chr10	25012801	.	T	TA	10447.57	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-11.553;DP=536;FS=1.801;HRun=9;HaplotypeScore=56.3392;InbreedingCoeff=0.9940;MQ=72.31;MQ0=0;MQRankSum=-1.183;QD=26.79;ReadPosRankSum=0.931;VQSLOD=5.3632;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,19:21:45.12:498,45,0	1/1:1,7:8:18.05:194,18,0	0/0:17,0:17:16.42:0,16,290	0/0:9,0:9:26.97:0,27,229	1/1:1,27:29:77.97:783,78,0	1/1:3,16:19:22.07:472,22,0	1/1:3,11:14:30.08:332,30,0	0/0:5,0:26:38.50:0,38,116	1/1:2,15:18:46.20:482,46,0	1/1:3,16:19:48.10:519,48,0	1/1:0,30:30:78.13:835,78,0	1/1:2,17:19:48.13:531,48,0	1/1:2,23:25:63.17:697,63,0	1/1:5,13:18:45.12:498,45,0	0/0:22,2:24:26.81:0,27,462	1/1:2,23:25:40.12:664,40,0	0/0:14,0:14:35.99:0,36,313	0/0:9,1:10:17.96:0,18,156	0/0:18,0:18:53.99:0,54,469	0/0:20,0:20:53.97:0,54,469	0/0:8,0:8:20.99:0,21,182	1/1:3,19:22:54.06:570,54,0	1/1:0,16:16:42.11:458,42,0	1/1:3,16:18:45.12:498,45,0	1/1:2,26:28:69.19:763,69,0	1/1:6,19:25:60.16:657,60,0	1/1:2,17:19:45.12:498,45,0	1/1:0,16:16:45.12:498,45,0
chr10	25014802	.	AACACACACAC	A	2566.44	PASS	AB=0.983;AC=31;AF=0.738;AN=42;BaseQRankSum=0.683;DP=509;FS=4.904;HRun=0;HaplotypeScore=147.7508;InbreedingCoeff=0.1682;MQ=69.13;MQ0=23;MQRankSum=-1.106;QD=8.97;ReadPosRankSum=2.795;VQSLOD=2.2740;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	0/0:43,0:22:0.47:0,0,1	1/1:21,0:21:3.43:20,3,0	0/1:18,0:18:24.86:25,0,65	0/0:16,2:17:0:0,0,0	./.	1/1:14,1:16:6.02:136,6,0	1/1:19,1:19:15.05:386,15,0	./.	1/1:16,0:16:12:225,12,0	1/1:21,0:21:12.04:301,12,0	1/1:11,3:15:3.48:70,3,0	1/1:20,0:21:9.46:171,9,0	1/1:15,1:16:5.60:166,6,0	0/0:19,0:17:2.92:0,3,17	1/1:13,0:12:6.02:140,6,0	0/0:5,0:5:2.80:0,3,6	1/1:5,0:5:3.01:88,3,0	0/1:19,0:18:57.95:58,0,82	./.	1/1:16,4:19:9.90:192,10,0	1/1:10,0:9:0.47:1,0,0	1/1:20,0:20:3.01:77,3,0	0/1:17,0:16:99:308,0,107	./.	1/1:13,0:14:12.04:315,12,0
chr10	25014840	.	CACACACACACACAGAG	C	6081.79	PASS	AB=0.985;AC=37;AF=0.661;AN=56;BaseQRankSum=2.376;DP=555;FS=4.178;HRun=0;HaplotypeScore=176.2090;InbreedingCoeff=0.0223;MQ=49.56;MQ0=36;MQRankSum=2.651;QD=12.59;ReadPosRankSum=2.096;VQSLOD=3.5789;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:23:27.09:0,27,484	1/1:6,0:5:6.02:78,6,0	0/0:10,0:1:3.01:0,3,56	0/0:20,0:5:11.93:0,12,181	1/1:29,0:29:2.79:25,3,0	0/1:19,1:19:74.51:75,0,94	1/1:19,0:17:17.41:225,17,0	0/0:15,0:13:23.91:0,24,294	1/1:15,0:14:11.34:245,11,0	1/1:29,0:26:29.93:976,30,0	0/1:24,1:24:16.96:27,0,17	1/1:26,1:27:13.48:326,13,0	0/1:21,1:22:3.25:374,0,3	1/1:25,0:24:13.63:493,14,0	0/1:29,1:28:7.05:270,0,7	0/1:20,0:20:41.91:564,0,42	0/1:19,0:17:38.18:129,0,38	1/1:13,0:11:2.64:242,3,0	0/1:11,0:11:20.94:229,0,21	0/1:16,0:16:17.85:339,0,18	0/1:15,0:13:38.61:39,0,171	1/1:19,0:19:1.86:32,2,0	1/1:17,2:18:23.99:377,24,0	1/1:18,0:15:2.99:24,3,0	1/1:19,1:18:6.02:116,6,0	0/1:27,0:25:99:542,0,204	0/1:25,0:25:1.08:25,0,1	1/1:13,0:13:12.04:310,12,0
chr10	25014842	.	CACACACACACAGAG	C	8194.62	PASS	AB=0.838;AC=43;AF=0.768;AN=56;BaseQRankSum=1.983;DP=549;FS=0.717;HRun=0;HaplotypeScore=157.5803;InbreedingCoeff=0.3406;MQ=49.95;MQ0=36;MQRankSum=2.086;QD=17.22;ReadPosRankSum=3.302;VQSLOD=3.6835;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:23:27.09:0,27,475	1/1:5,0:5:6.02:78,6,0	0/0:12,0:1:3.01:0,3,56	0/0:19,0:7:17.95:0,18,284	1/1:9,20:29:6.96:104,7,0	0/1:6,13:18:87.32:100,0,87	1/1:18,0:16:17.75:334,18,0	0/0:15,0:13:23.91:0,24,294	1/1:16,1:15:14.37:356,14,0	1/1:27,0:23:62.42:1145,62,0	1/1:9,16:24:3.01:33,3,0	1/1:9,18:27:13.82:432,14,0	1/1:4,19:23:11.45:489,11,0	1/1:25,0:24:34.04:534,34,0	1/1:9,20:27:12.92:345,13,0	0/1:19,1:20:6.69:743,0,7	0/1:18,0:16:2.91:204,0,3	1/1:13,0:11:24.08:392,24,0	1/1:11,0:11:0.02:253,0,0	1/1:17,0:17:35.39:495,35,0	0/1:15,0:13:99:122,0,128	1/1:7,13:20:6.02:67,6,0	1/1:19,1:19:30.97:600,31,0	1/1:4,13:14:0.47:1,0,0	1/1:4,16:18:6.02:161,6,0	0/1:12,15:25:99:731,0,156	1/1:2,19:21:4.05:61,4,0	1/1:2,10:12:12.04:415,12,0
chr10	25014852	.	CAGAG	C	6371.53	PASS	AB=0.981;AC=44;AF=0.786;AN=56;BaseQRankSum=2.762;DP=563;FS=0.000;HRun=0;HaplotypeScore=122.6334;InbreedingCoeff=0.5962;MQ=58.11;MQ0=33;MQRankSum=1.767;QD=14.38;ReadPosRankSum=6.725;VQSLOD=4.1769;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:22:30.10:0,30,481	1/1:3,0:8:9.03:112,9,0	0/0:20,0:6:15.05:0,15,244	0/0:23,0:14:25.95:0,26,339	1/1:27,0:27:6.28:66,6,0	1/1:18,0:17:9.03:105,9,0	1/1:18,0:18:27.09:423,27,0	0/0:35,0:32:73.32:0,73,1023	1/1:16,0:14:16.96:227,17,0	1/1:8,18:22:50.42:798,50,0	1/1:23,0:22:3.01:33,3,0	1/1:25,0:25:14.84:178,15,0	1/1:21,0:21:11.85:155,12,0	1/1:22,0:21:33.11:509,33,0	1/1:27,0:25:11.90:149,12,0	1/1:18,0:18:45.15:661,45,0	1/1:20,0:18:32.60:398,33,0	1/1:10,0:8:18.06:252,18,0	1/1:5,8:13:24.02:366,24,0	1/1:16,0:17:42.14:651,42,0	0/1:15,0:13:35.01:158,0,35	1/1:20,0:20:6.02:67,6,0	1/1:19,0:18:30.57:441,31,0	0/0:16,0:14:3.01:0,3,50	1/1:20,0:18:6.02:73,6,0	0/1:25,0:24:27.94:409,0,28	1/1:21,0:21:6.01:64,6,0	1/1:12,0:12:5.96:78,6,0
chr10	25017086	.	TA	T	1226.45	PASS	AB=0.939;AC=4;AF=0.071;AN=56;BaseQRankSum=5.220;DP=695;FS=1.988;HRun=4;HaplotypeScore=81.1044;InbreedingCoeff=0.4932;MQ=77.20;MQ0=0;MQRankSum=-2.638;QD=16.80;ReadPosRankSum=-3.758;VQSLOD=2.6931;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,102,1421	0/0:12,0:12:36.12:0,36,500	0/1:13,1:14:35.82:36,0,318	0/1:16,1:17:5.02:5,0,416	0/0:27,0:27:72.19:0,72,970	0/0:29,0:29:87.28:0,87,1201	0/0:29,0:29:78.26:0,78,1091	1/1:6,36:42:99:1295,108,0	0/0:25,0:25:72.23:0,72,993	0/0:24,0:24:72.21:0,72,972	0/0:20,0:20:60.20:0,60,833	0/0:20,0:20:54.17:0,54,739	0/0:32,0:32:93.30:0,93,1281	0/0:36,0:36:96.32:0,96,1343	0/0:34,0:34:99:0,102,1427	0/0:24,0:24:72.24:0,72,1005	0/0:19,0:19:54.14:0,54,719	0/0:8,0:7:18.06:0,18,252	0/0:23,0:23:60.17:0,60,804	0/0:47,0:47:99:0,138,1932	0/0:19,0:19:57.16:0,57,763	0/0:25,0:25:69.19:0,69,937	0/0:14,0:14:42.14:0,42,587	0/0:37,0:37:99:0,105,1470	0/0:17,0:17:51.17:0,51,714	0/0:29,0:29:81.27:0,81,1131	0/0:32,0:32:93.29:0,93,1283	0/0:6,0:6:18.06:0,18,252
chr10	25017226	.	A	AT	14683.52	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=13.499;DP=713;FS=3.079;HRun=7;HaplotypeScore=100.6773;InbreedingCoeff=0.9995;MQ=81.17;MQ0=0;MQRankSum=-1.656;QD=30.28;ReadPosRankSum=4.503;VQSLOD=4.1653;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,14:18:42.13:507,42,0	1/1:3,9:12:27.08:326,27,0	0/0:16,0:17:29.67:0,30,291	0/0:18,0:19:45.07:0,45,432	1/1:5,22:27:66.17:782,66,0	1/1:1,30:31:87.27:1051,87,0	1/1:5,19:24:57.17:688,57,0	0/0:36,0:36:87.13:0,87,840	1/1:3,28:31:75.23:906,75,0	1/1:5,31:36:93.29:1123,93,0	1/1:2,28:30:81.25:979,81,0	1/1:4,17:21:48.15:580,48,0	1/1:2,28:30:84.26:1012,84,0	1/1:5,25:30:69.21:825,69,0	0/0:30,0:30:81.11:0,81,777	1/1:0,23:23:60.18:725,60,0	0/0:22,0:22:66.08:0,66,630	0/0:10,0:10:30.01:0,30,281	0/0:21,0:21:60.09:0,60,575	0/0:37,0:37:99:0,102,958	0/0:36,0:36:96.15:0,96,927	1/1:1,33:34:87.27:1051,87,0	1/1:1,20:21:57.17:688,57,0	1/1:0,13:13:34.35:401,34,0	1/1:3,22:25:44.17:739,44,0	1/1:3,23:26:69.20:821,69,0	1/1:4,35:40:92.34:1153,92,0	1/1:1,12:13:27.08:326,27,0
chr10	25017995	.	A	AC	9626.30	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-11.285;DP=585;FS=0.000;HRun=7;HaplotypeScore=68.1112;InbreedingCoeff=0.9974;MQ=84.95;MQ0=1;MQRankSum=-2.398;QD=28.07;ReadPosRankSum=4.801;VQSLOD=5.1682;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,12:13:29.76:337,30,0	1/1:2,11:13:18.06:217,18,0	0/0:54,0:43:47.59:0,48,488	0/0:40,0:28:41.04:0,41,341	1/1:2,18:20:51.16:616,51,0	1/1:2,16:18:42.13:505,42,0	1/1:9,16:25:65.96:725,66,0	0/0:27,0:27:72.03:0,72,671	1/1:0,9:9:24.07:290,24,0	1/1:2,19:21:50.97:544,51,0	1/1:2,16:18:42.08:488,42,0	1/1:1,16:17:45.14:543,45,0	1/1:3,18:21:48.15:580,48,0	1/1:3,13:16:33.10:399,33,0	0/0:21,0:21:54.06:0,54,516	1/1:1,18:19:51.16:615,51,0	0/0:29,0:29:87.12:0,87,833	0/0:11,0:11:33.02:0,33,310	0/0:17,0:17:33.01:0,33,302	0/0:17,0:17:51.03:0,51,471	0/0:25,0:25:69.02:0,69,641	1/1:5,16:21:42.04:482,42,0	1/1:1,17:18:45.06:543,45,0	1/1:1,10:11:30.09:362,30,0	1/1:2,11:13:21.06:253,21,0	1/1:4,17:21:51.15:606,51,0	1/1:1,36:37:90.28:1087,90,0	1/1:0,12:12:36.11:435,36,0
chr10	25018343	.	AAC	A	720.13	PASS	AB=1.000;AC=13;AF=0.260;AN=50;BaseQRankSum=-0.440;DP=512;FS=2.703;HRun=0;HaplotypeScore=93.0246;InbreedingCoeff=0.6871;MQ=66.80;MQ0=9;MQRankSum=1.197;QD=5.00;ReadPosRankSum=2.309;VQSLOD=2.8270;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:35,0:34:3.15:3,0,210	0/0:9,0:9:14.99:0,15,132	./.	./.	0/0:20,0:20:23.71:0,24,187	0/0:17,0:17:9.45:0,9,74	0/0:17,0:24:7.19:0,7,54	./.	0/0:18,0:18:17.92:0,18,139	0/0:27,0:26:26.96:0,27,244	0/0:9,0:9:2.99:0,3,23	0/0:14,0:14:14.99:0,15,139	0/0:13,0:13:9:0,9,85	0/0:12,0:22:5.89:0,6,52	1/1:10,3:13:9.02:96,9,0	0/0:14,0:19:6.47:0,6,52	1/1:8,7:18:23.56:202,24,0	1/1:8,3:11:14.22:125,14,0	1/1:16,1:18:5.85:46,6,0	1/1:13,5:17:15.04:160,15,0	1/1:23,6:31:26.73:252,27,0	0/0:13,0:18:6.22:0,6,36	0/0:17,0:16:5.99:0,6,48	0/0:19,0:19:14.96:0,15,119	0/0:6,0:16:5.98:0,6,48	0/0:20,0:19:27.75:0,28,227	0/0:20,0:20:21.81:0,22,177	0/0:7,0:7:3:0,3,26
chr10	25020928	.	GAGAAA	G	9860.10	PASS	AB=0.583;AC=37;AF=0.661;AN=56;BaseQRankSum=3.189;DP=674;FS=6.532;HRun=0;HaplotypeScore=116.2384;InbreedingCoeff=0.9013;MQ=70.04;MQ0=20;MQRankSum=6.658;QD=26.65;ReadPosRankSum=3.880;VQSLOD=4.0716;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,29:31:27.09:523,27,0	1/1:4,4:8:6.02:116,6,0	0/0:52,0:22:11.05:0,11,220	0/0:76,0:22:14.06:0,14,106	1/1:4,27:31:74.86:1110,75,0	1/1:4,24:28:21.07:407,21,0	0/1:4,10:14:1.44:142,0,1	0/0:51,0:51:95.07:0,95,1391	1/1:1,10:11:21.07:404,21,0	1/1:7,17:24:51.07:894,51,0	1/1:7,21:27:51.16:733,51,0	1/1:0,15:15:15.05:291,15,0	1/1:4,17:21:15.05:291,15,0	1/1:3,14:17:21.07:392,21,0	0/0:16,0:16:42.14:0,42,1047	1/1:1,12:13:21.07:407,21,0	0/0:20,0:20:51.08:0,51,937	0/0:26,0:26:65.99:0,66,1198	0/0:27,0:25:54.10:0,54,1214	0/0:29,0:29:75.21:0,75,1431	0/0:5,0:5:9.02:0,9,150	1/1:2,14:16:39.13:638,39,0	1/1:1,17:18:32.90:543,33,0	1/1:0,9:9:9.03:174,9,0	1/1:1,20:21:39.13:751,39,0	1/1:6,24:30:72.25:1294,72,0	1/1:4,12:16:18.06:349,18,0	1/1:1,18:19:21.07:402,21,0
chr10	25021357	.	C	CTATA	6085.19	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-10.260;DP=637;FS=2.034;HRun=0;HaplotypeScore=101.2942;InbreedingCoeff=0.9948;MQ=92.13;MQ0=0;MQRankSum=-3.660;QD=61.47;ReadPosRankSum=1.655;VQSLOD=6.9185;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:60.19:0,60,1071	0/0:8,0:8:21.05:0,21,316	0/0:23,0:23:57.18:0,57,995	0/0:33,0:33:87.25:0,87,1446	0/0:17,0:17:42.14:0,42,784	0/0:32,0:32:90.29:0,90,1630	0/0:16,0:16:48.16:0,48,887	0/0:42,0:42:99:0,111,1991	0/0:20,0:20:60.19:0,60,1089	0/0:17,0:17:42.10:0,42,728	0/0:18,0:18:48.14:0,48,825	0/0:31,0:31:87.27:0,87,1552	0/0:25,0:25:72.23:0,72,1312	0/0:27,0:27:81.28:0,81,1512	0/0:22,0:22:63.22:0,63,1175	0/0:27,0:27:72.25:0,72,1344	1/1:2,22:24:66.23:1759,66,0	1/1:1,8:9:24.08:639,24,0	1/1:4,11:18:48.15:1152,48,0	1/1:3,27:32:63.22:1677,63,0	1/1:5,10:16:33.11:858,33,0	0/0:19,0:19:45.13:0,45,763	0/0:33,0:33:78.19:0,78,1351	0/0:22,0:22:60.21:0,60,1120	0/0:14,0:14:39.13:0,39,728	0/0:32,0:32:93.32:0,93,1730	0/0:30,0:30:84.29:0,84,1559	0/0:7,0:7:15.05:0,15,280
chr10	25021610	.	G	GA	887.27	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-7.519;DP=592;FS=4.596;HRun=8;HaplotypeScore=56.7707;InbreedingCoeff=0.9653;MQ=84.11;MQ0=0;MQRankSum=-1.430;QD=26.10;ReadPosRankSum=-3.566;VQSLOD=3.0415;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:42.01:0,42,381	0/0:10,0:10:27.01:0,27,247	0/0:23,0:23:56.88:0,57,507	0/0:12,0:12:24:0,24,217	0/0:28,0:28:81.04:0,81,740	0/0:29,0:29:78.04:0,78,714	0/0:13,0:13:33.02:0,33,302	1/1:5,28:34:90.49:982,90,0	0/0:11,0:11:30.01:0,30,271	0/0:15,0:15:45.02:0,45,408	0/0:24,0:24:63.03:0,63,577	0/0:19,0:19:48.02:0,48,439	0/0:19,0:19:41.96:0,42,376	0/0:19,0:19:51.01:0,51,463	0/0:25,0:25:62.99:0,63,565	0/0:21,0:21:50.99:0,51,458	0/0:21,0:21:62.98:0,63,563	0/0:18,0:18:45.02:0,45,411	0/0:19,0:19:54.02:0,54,491	0/0:37,0:37:99:0,105,956	0/0:6,0:6:15.01:0,15,137	0/0:23,0:23:56.99:0,57,512	0/0:29,0:29:84.02:0,84,761	0/0:15,0:15:38.99:0,39,351	0/0:23,0:23:60.03:0,60,549	0/0:32,0:32:81.04:0,81,741	0/0:45,0:45:99:0,105,956	0/0:7,0:7:14.99:0,15,131
chr10	25022133	.	TAAAGC	T	149.74	PASS	AB=0.943;AC=8;AF=0.154;AN=52;BaseQRankSum=3.190;DP=188;FS=1.472;HRun=0;HaplotypeScore=74.8629;InbreedingCoeff=-0.1201;MQ=88.28;MQ0=1;MQRankSum=-3.014;QD=2.63;ReadPosRankSum=-4.384;VQSLOD=0.3476;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:6,0:6:37.49:37,0,272	0/0:1,0:1:3.01:0,3,90	0/0:10,0:8:6.75:0,7,65	0/1:18,0:13:35.35:35,0,68	0/0:6,1:7:17.96:0,18,320	0/0:12,0:12:31.61:0,32,664	0/0:2,1:2:2.97:0,3,20	0/0:27,0:27:81.24:0,81,2229	0/0:5,0:5:14.97:0,15,260	0/0:5,0:5:10.52:0,11,218	0/0:2,0:2:3.01:0,3,64	0/0:4,0:4:4.65:0,5,86	1/1:1,0:1:0.89:2,1,0	0/0:3,1:4:8.98:0,9,157	0/0:2,0:2:6.02:0,6,194	0/0:5,1:6:12.04:0,12,330	0/0:14,0:14:42.14:0,42,1350	0/0:7,0:7:21.07:0,21,661	0/0:8,0:8:20.76:0,21,671	0/0:10,0:10:30.10:0,30,958	0/0:2,0:2:6.02:0,6,194	./.	0/0:1,0:1:2.97:0,3,20	./.	0/1:9,0:9:46.23:46,0,419	0/1:4,1:5:61.21:61,0,199	0/1:10,0:9:42.64:43,0,454	0/1:6,1:7:44.08:44,0,397
chr10	25022138	.	C	CATATATAT	5664.51	PASS	AC=30;AF=0.625;AN=48;BaseQRankSum=-1.390;DP=192;FS=2.534;HRun=0;HaplotypeScore=69.1681;InbreedingCoeff=0.7224;MQ=90.83;MQ0=1;MQRankSum=-8.156;QD=66.64;ReadPosRankSum=0.880;VQSLOD=4.7027;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,0:7:15.05:317,15,0	1/1:1,0:1:3.01:66,3,0	0/0:12,0:9:4.16:0,4,23	0/0:21,0:14:2.12:0,2,11	1/1:3,2:5:3.01:83,3,0	1/1:6,5:12:21.07:767,21,0	./.	0/0:23,0:23:51.18:0,51,1299	1/1:3,2:5:9.03:316,9,0	1/1:0,4:4:12.04:506,12,0	1/1:0,1:1:3.01:127,3,0	1/1:2,2:4:6.02:232,6,0	1/1:2,1:3:6.02:192,6,0	1/1:2,0:4:6.02:146,6,0	0/0:2,0:2:3.01:0,3,79	1/1:5,1:6:6.02:191,6,0	0/0:15,0:15:42.13:0,42,1039	0/0:8,0:8:15.05:0,15,397	0/0:8,0:9:20.60:0,21,501	0/0:10,0:10:30.10:0,30,793	0/0:3,0:3:9.01:0,9,183	./.	./.	./.	1/1:3,5:9:24.07:774,24,0	1/1:2,2:5:15.04:411,15,0	1/1:3,6:10:21.07:756,21,0	1/1:3,5:8:24.08:779,24,0
chr10	25022150	.	TAAAGC	T	469.34	PASS	AB=0.882;AC=10;AF=0.179;AN=56;BaseQRankSum=-0.223;DP=234;FS=0.000;HRun=0;HaplotypeScore=87.6026;InbreedingCoeff=-0.2701;MQ=84.37;MQ0=2;MQRankSum=-3.438;QD=6.10;ReadPosRankSum=-2.437;VQSLOD=1.4167;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:7:12:0,12,45	0/1:2,0:2:47.03:60,0,47	0/1:11,0:9:35.98:36,0,50	0/0:18,0:12:8.60:0,9,57	0/1:6,1:7:48.61:49,0,159	0/1:11,1:12:59.76:60,0,139	0/0:4,1:4:8.95:0,9,123	0/0:27,0:27:81.28:0,81,1728	0/1:5,2:7:91.55:119,0,92	0/0:8,0:8:6.30:0,6,218	0/0:3,0:3:4.26:0,4,56	0/0:2,2:4:4.17:0,4,20	0/0:4,0:4:10.03:0,10,87	0/1:4,1:5:36.79:37,0,63	0/0:3,0:2:3.01:0,3,57	0/1:2,2:4:12.88:57,0,13	0/0:15,0:15:45.14:0,45,936	0/0:8,0:8:23.97:0,24,404	0/0:12,0:12:32.79:0,33,659	0/0:15,0:15:45.15:0,45,854	0/0:6,0:6:18.06:0,18,328	0/0:1,0:1:3.01:0,3,53	0/0:1,1:2:3.01:0,3,53	0/0:2,0:2:6.02:0,6,105	0/1:9,1:10:42.38:42,0,171	0/1:7,0:7:9.44:9,0,160	0/0:16,0:15:22.09:0,22,361	0/1:10,1:11:99:139,0,198
chr10	25022153	.	AG	A	252.90	PASS	AB=0.977;AC=16;AF=0.286;AN=56;BaseQRankSum=9.363;DP=240;FS=2.555;HRun=1;HaplotypeScore=75.7780;InbreedingCoeff=-0.2100;MQ=79.49;MQ0=2;MQRankSum=-8.278;QD=2.26;ReadPosRankSum=3.469;VQSLOD=-0.6428;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:7,0:7:0.86:24,0,1	0/1:2,0:2:18.43:18,0,39	0/1:10,0:7:25.45:25,0,61	0/0:18,1:12:8.29:0,8,66	0/1:7,0:7:14.88:15,0,133	0/1:10,2:12:78.76:79,0,82	0/0:6,0:5:8.90:0,9,104	0/0:31,0:31:92.05:0,92,1285	0/1:6,1:7:30.03:30,0,76	0/1:8,0:8:6.75:7,0,176	0/1:4,0:4:6.47:6,0,39	1/1:3,0:4:5.09:19,5,0	0/1:4,0:4:0.33:0,0,82	0/1:6,0:6:31.75:32,0,68	0/0:2,0:1:3.01:0,3,45	0/1:4,0:4:5.59:30,0,6	0/0:14,0:14:42.14:0,42,623	0/0:9,0:9:23.57:0,24,320	0/0:12,0:12:33.10:0,33,486	0/0:16,0:16:45.15:0,45,659	0/0:6,0:6:18.06:0,18,262	0/0:2,0:2:3.01:0,3,45	0/0:2,0:2:3.01:0,3,45	0/0:2,0:2:6.02:0,6,89	0/1:10,0:10:42.22:42,0,101	0/0:7,0:7:0.13:0,0,128	0/1:15,1:15:7.32:7,0,279	0/1:11,0:11:62.04:62,0,155
chr10	25023336	.	A	ATT	1655.71	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-1.942;DP=666;FS=2.502;HRun=5;HaplotypeScore=76.6345;InbreedingCoeff=0.9929;MQ=78.29;MQ0=0;MQRankSum=-1.215;QD=28.55;ReadPosRankSum=-3.705;VQSLOD=2.5022;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,0:23:47.41:168,47,0	0/0:8,0:8:21.06:0,21,267	0/0:15,0:15:36.11:0,36,446	0/0:15,0:15:32.96:0,33,382	0/0:49,0:49:99:0,132,1682	0/0:32,0:32:90.29:0,90,1147	0/0:14,0:14:39.12:0,39,497	1/1:4,31:35:93.32:1609,93,0	0/0:27,0:27:75.20:0,75,935	0/0:41,0:40:99:0,120,1511	0/0:46,0:46:99:0,123,1531	0/0:20,0:20:51.16:0,51,649	0/0:26,0:26:72.21:0,72,904	0/0:21,0:21:60.19:0,60,764	0/0:25,0:25:69.22:0,69,879	0/0:22,0:22:57.18:0,57,727	0/0:23,0:23:51.16:0,51,650	0/0:10,0:10:27.09:0,27,343	0/0:26,0:26:69.22:0,69,880	0/0:45,0:44:99:0,123,1535	0/0:12,0:12:36.12:0,36,459	0/0:19,0:19:57.18:0,57,726	0/0:19,0:19:54.17:0,54,688	0/0:13,0:13:36.11:0,36,459	0/0:17,0:17:48.12:0,48,585	0/0:30,0:31:74.89:0,75,1023	0/0:26,0:26:78.25:0,78,992	0/0:6,0:6:18.06:0,18,229
chr10	25024177	.	AGAGT	A	4701.21	PASS	AB=0.971;AC=45;AF=0.833;AN=54;BaseQRankSum=1.918;DP=534;FS=0.726;HRun=0;HaplotypeScore=142.8873;InbreedingCoeff=0.1902;MQ=35.22;MQ0=26;MQRankSum=0.750;QD=9.75;ReadPosRankSum=2.995;VQSLOD=4.1443;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:4,20:22:1.36:0,1,3	1/1:4,4:8:5.98:57,6,0	0/1:84,0:16:69.81:70,0,420	0/1:101,0:14:18.54:19,0,507	1/1:7,8:15:8.21:100,8,0	1/1:3,15:18:9.21:197,9,0	1/1:5,7:12:11.92:133,12,0	0/1:23,2:24:4.50:4,0,1572	1/1:2,9:10:9.03:163,9,0	1/1:5,9:13:36.08:599,36,0	0/0:0,11:10:0:0,0,0	1/1:1,12:13:9.12:196,9,0	1/1:3,11:14:22.02:383,22,0	1/1:7,10:17:17.76:296,18,0	1/1:11,8:19:10.29:150,10,0	1/1:4,22:26:22.81:491,23,0	1/1:12,3:15:23.91:368,24,0	1/1:3,1:4:8.81:99,9,0	1/1:4,2:4:0.99:160,1,0	./.	1/1:13,1:13:6:83,6,0	1/1:5,12:16:5.55:120,6,0	0/0:0,13:13:1.22:0,1,2	1/1:10,7:17:17.46:294,17,0	1/1:2,9:11:3.01:30,3,0	1/1:4,3:7:21.06:365,21,0	1/1:3,4:7:15.05:281,15,0	1/1:4,1:5:5.96:43,6,0
chr10	25024179	.	AGT	A	2889.07	PASS	AC=40;AF=0.769;AN=52;BaseQRankSum=3.776;DP=540;FS=10.473;HRun=0;HaplotypeScore=141.8010;InbreedingCoeff=0.6406;MQ=34.53;MQ0=30;MQRankSum=-0.495;QD=10.99;ReadPosRankSum=2.515;VQSLOD=2.5973;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,2:22:0.94:0,1,2	1/1:4,3:7:3.01:48,3,0	0/0:90,0:16:31.18:0,31,345	0/0:108,0:14:34.58:0,35,384	1/1:16,1:17:14.17:149,14,0	1/1:18,0:17:7.38:110,7,0	1/1:12,0:12:11.85:92,12,0	0/0:24,0:23:27.63:0,28,1028	1/1:11,0:10:9.03:112,9,0	1/1:13,1:13:36:391,36,0	0/0:11,0:10:0:0,0,0	1/1:13,0:13:10.82:124,11,0	1/1:13,1:14:22.44:268,22,0	1/1:17,0:17:17.14:185,17,0	1/1:15,2:17:5.21:64,5,0	1/1:27,0:27:25.33:321,25,0	1/1:13,1:14:24.32:235,24,0	1/1:3,1:4:6.02:72,6,0	1/1:8,0:4:11.99:131,12,0	./.	1/1:11,2:12:3.01:39,3,0	1/1:17,0:16:5.55:75,6,0	0/0:13,0:13:1.41:0,1,2	1/1:15,1:16:14:195,14,0	1/1:11,0:11:2.94:18,3,0	1/1:5,1:6:18.06:227,18,0	1/1:7,0:7:15.04:178,15,0	./.
chr10	25024195	.	AAT	A	3879.18	PASS	AB=0.917;AC=52;AF=0.929;AN=56;BaseQRankSum=4.015;DP=537;FS=26.388;HRun=0;HaplotypeScore=133.8532;InbreedingCoeff=0.1343;MQ=34.10;MQ0=26;MQRankSum=2.188;QD=7.56;ReadPosRankSum=1.712;VQSLOD=1.7668;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,10:25:8.74:103,9,0	1/1:3,3:6:2.97:20,3,0	0/1:63,7:7:46.09:114,0,46	0/1:79,7:9:70.76:71,0,186	1/1:10,11:22:8.54:74,9,0	1/1:7,15:21:3.92:51,4,0	1/1:4,9:12:6.02:71,6,0	0/0:23,1:24:36.96:0,37,859	1/1:3,7:11:12.04:159,12,0	1/1:1,16:15:42.12:544,42,0	1/1:4,6:8:2.94:27,3,0	1/1:4,10:14:18.04:213,18,0	1/1:1,16:17:16.87:195,17,0	1/1:5,10:15:20.84:239,21,0	1/1:0,18:18:2.47:28,2,0	1/1:8,22:30:30.06:354,30,0	1/1:8,8:17:22.85:237,23,0	1/1:5,0:5:5.43:85,5,0	1/1:4,8:8:24.05:294,24,0	1/1:4,2:5:9.03:135,9,0	1/1:5,13:17:2.88:45,3,0	1/1:0,18:17:3.01:46,3,0	1/1:6,7:13:5.71:90,6,0	1/1:11,8:19:10.93:163,11,0	1/1:1,8:9:3:25,3,0	1/1:5,5:10:25.38:296,25,0	1/1:0,7:7:15.03:162,15,0	1/1:0,3:3:3.01:38,3,0
chr10	25025608	.	TAC	T	53.56	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=1.346;DP=631;FS=1.242;HRun=0;HaplotypeScore=145.9348;InbreedingCoeff=0.5728;MQ=55.90;MQ0=9;MQRankSum=-0.100;QD=1.98;ReadPosRankSum=1.209;VQSLOD=2.7269;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:75.13:0,75,1009	0/0:5,0:5:8.62:0,9,91	0/0:36,0:14:12:0,12,140	0/0:34,0:13:13.94:0,14,201	0/0:24,0:24:44.75:0,45,498	0/0:20,0:20:44.50:0,45,567	0/0:23,0:23:50.86:0,51,696	0/0:24,0:24:47.72:0,48,528	0/0:13,0:13:33.03:0,33,382	0/0:32,0:32:70.58:0,71,913	0/1:16,0:16:14.54:15,0,278	0/0:15,0:15:24.40:0,24,343	0/0:12,0:13:18.98:0,19,312	0/0:18,1:18:21.97:0,22,473	1/1:6,5:11:12.02:136,12,0	0/0:15,0:15:32.96:0,33,442	0/0:30,1:30:38.03:0,38,544	0/0:26,0:26:55.84:0,56,521	0/0:17,0:16:41.86:0,42,436	0/0:19,0:18:26.99:0,27,275	0/0:30,0:28:51.06:0,51,631	0/0:23,0:23:42.11:0,42,586	0/0:21,0:21:51.19:0,51,647	0/0:40,0:39:80.07:0,80,1009	0/0:21,0:21:47.97:0,48,660	0/0:30,0:30:71.68:0,72,910	0/0:21,0:21:35.81:0,36,441	0/0:14,0:14:30.08:0,30,420
chr10	25025623	.	G	GCA	501	PASS	AB=1.000;AC=10;AF=0.185;AN=54;BaseQRankSum=0.988;DP=597;FS=1.351;HRun=0;HaplotypeScore=162.0608;InbreedingCoeff=0.2151;MQ=51.31;MQ0=18;MQRankSum=-0.961;QD=2.75;ReadPosRankSum=-3.989;VQSLOD=1.8500;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:28,5:33:38.58:455,39,0	0/0:6,0:6:1.94:0,2,22	./.	0/1:30,0:7:0:0,0,0	0/1:24,0:24:23.08:23,0,75	0/0:25,0:23:18.55:0,19,121	0/0:24,0:24:17.34:0,17,114	1/1:21,0:19:17.58:120,18,0	0/1:9,0:9:16.68:19,0,17	0/0:26,0:25:23.40:0,23,147	0/0:13,0:13:11.83:0,12,64	0/0:15,0:15:2.22:0,2,30	0/1:11,0:11:10.23:10,0,75	0/0:21,0:20:4.17:0,4,87	0/0:11,0:10:8.13:0,8,37	0/0:13,0:13:7.79:0,8,45	0/0:26,0:25:18.35:0,18,113	0/0:26,0:26:34.89:0,35,146	0/0:22,0:18:25.79:0,26,100	0/0:14,0:13:16.50:0,17,63	0/0:33,0:30:18.57:0,19,75	0/0:21,0:21:4.75:0,5,24	0/0:26,0:25:21.03:0,21,133	0/0:34,0:33:1.21:0,1,106	0/0:21,0:21:18.76:0,19,87	0/1:37,0:37:7.19:7,0,248	0/1:17,0:17:2.85:3,0,26	0/0:14,0:14:0.88:0,1,44
chr10	25025641	.	ACACG	A	1314.34	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=-7.185;DP=634;FS=11.493;HRun=0;HaplotypeScore=188.2183;InbreedingCoeff=0.2674;MQ=53.23;MQ0=23;MQRankSum=-0.478;QD=3.39;ReadPosRankSum=-5.792;VQSLOD=-0.2757;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:35,0:35:67.99:169,0,68	0/1:7,0:7:24.20:24,0,70	1/1:33,0:2:2.04:6,2,0	0/1:46,0:8:23.08:25,0,23	0/0:29,0:29:20.94:0,21,388	0/0:26,0:24:17.63:0,18,350	0/0:22,0:22:4.36:0,4,299	0/1:19,0:16:99:114,0,111	0/0:13,0:13:20.60:0,21,290	0/1:21,0:20:99:118,0,216	0/1:12,0:12:10.78:11,0,99	0/0:17,0:17:34.32:0,34,339	0/1:13,0:13:18.89:19,0,124	0/0:25,1:26:21.03:0,21,457	1/1:3,11:12:8.56:169,9,0	0/1:15,0:15:0.39:0,0,193	1/1:26,0:26:37.89:165,38,0	1/1:27,1:28:29.75:177,30,0	1/1:29,0:23:44.23:264,44,0	1/1:14,0:13:18.07:83,18,0	1/1:33,0:30:21.91:104,22,0	0/0:20,0:20:29.71:0,30,327	0/0:24,0:23:16.43:0,16,295	0/0:25,0:25:14.24:0,14,336	0/0:20,0:20:33.93:0,34,418	0/1:42,0:42:51.70:52,0,665	0/0:14,0:14:2.41:0,2,211	0/0:10,0:10:4.73:0,5,168
chr10	25025643	.	ACG	A	3673.49	PASS	AB=0.988;AC=30;AF=0.536;AN=56;BaseQRankSum=-10.818;DP=634;FS=8.203;HRun=0;HaplotypeScore=165.9371;InbreedingCoeff=-0.0968;MQ=55.25;MQ0=23;MQRankSum=-1.290;QD=6.72;ReadPosRankSum=-6.378;VQSLOD=0.8247;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:33,2:35:5.32:195,0,5	0/1:7,0:7:10.06:43,0,10	1/1:36,0:2:3.28:9,3,0	0/1:48,0:10:6.03:28,0,6	0/1:29,0:29:32.90:33,0,81	0/1:26,0:24:3.43:3,0,95	0/1:22,0:22:1.49:1,0,70	0/1:19,0:16:70.86:127,0,71	0/0:13,0:13:19.98:0,20,124	0/1:21,0:20:35.47:140,0,35	0/1:12,0:12:17.39:70,0,17	0/1:17,0:17:18.97:19,0,70	0/1:11,1:12:28.32:64,0,28	0/1:26,0:26:14.43:14,0,123	1/1:14,0:12:8.58:69,9,0	0/1:15,0:15:3.06:3,0,52	1/1:5,21:26:41.73:602,42,0	1/1:2,25:27:38.78:652,39,0	1/1:7,20:22:64.25:688,64,0	1/1:2,13:14:21.07:317,21,0	1/1:5,26:28:24.04:339,24,0	0/0:20,0:20:23.84:0,24,106	0/0:24,0:23:10.04:0,10,92	0/1:26,0:26:34.95:35,0,84	0/0:20,0:20:6.12:0,6,92	0/1:42,0:42:99:184,0,190	0/1:13,1:14:37.25:37,0,45	0/0:10,0:10:5.10:0,5,57
chr10	25025645	.	G	GCA	4829.42	PASS	AB=0.989;AC=54;AF=0.964;AN=56;BaseQRankSum=1.385;DP=646;FS=6.613;HRun=0;HaplotypeScore=173.8585;InbreedingCoeff=0.0167;MQ=55.06;MQ0=22;MQRankSum=1.977;QD=7.48;ReadPosRankSum=1.514;VQSLOD=3.7563;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:28,6:34:36.17:413,36,0	1/1:8,0:8:1.62:54,2,0	1/1:37,0:2:0.83:10,1,0	0/1:41,0:9:10.43:10,0,79	1/1:31,0:31:18.52:153,19,0	1/1:28,0:26:26.07:128,26,0	1/1:21,0:21:33.15:165,33,0	1/1:7,13:17:1.65:425,2,0	1/1:14,0:14:13.61:68,14,0	1/1:21,0:20:26.76:276,27,0	1/1:13,0:13:15.59:79,16,0	1/1:18,0:18:11.09:81,11,0	0/1:12,0:12:2.83:97,0,3	1/1:26,1:27:20.25:168,20,0	1/1:14,1:13:8.20:36,8,0	1/1:16,0:16:18.45:79,18,0	1/1:24,1:25:37.96:237,38,0	1/1:27,0:27:24.12:202,24,0	1/1:26,0:21:47.68:506,48,0	1/1:16,0:15:20.45:159,20,0	1/1:32,0:29:26.46:172,26,0	1/1:21,0:21:24.59:134,25,0	1/1:24,0:23:27.32:131,27,0	1/1:26,1:27:21.78:92,22,0	1/1:21,0:21:25:185,25,0	1/1:41,1:42:39.87:586,40,0	1/1:16,0:16:20.01:101,20,0	1/1:10,0:10:18.33:82,18,0
chr10	25025657	.	T	TCA	7356.61	PASS	AB=0.588;AC=36;AF=0.643;AN=56;BaseQRankSum=-2.989;DP=670;FS=2.156;HRun=0;HaplotypeScore=168.9841;InbreedingCoeff=0.8076;MQ=60.48;MQ0=15;MQRankSum=1.932;QD=18.16;ReadPosRankSum=2.962;VQSLOD=5.2175;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:21,6:27:28.87:335,29,0	1/1:2,3:5:12.01:165,12,0	0/0:52,0:13:13.06:0,13,150	0/0:61,0:23:15.20:0,15,457	1/1:11,20:32:30.02:436,30,0	1/1:8,19:26:24.08:380,24,0	1/1:9,15:24:18.06:293,18,0	0/0:17,0:15:6.70:0,7,102	1/1:2,12:15:18.02:280,18,0	1/1:8,15:23:48.03:648,48,0	1/1:9,4:13:9.92:137,10,0	1/1:3,16:20:29.86:450,30,0	1/1:9,3:12:24.08:376,24,0	1/1:10,14:25:33.07:501,33,0	0/0:15,0:13:11.92:0,12,131	1/1:2,13:15:18.01:283,18,0	0/0:24,0:24:36.05:0,36,354	0/0:25,0:25:39.54:0,40,403	0/0:28,0:25:52.66:0,53,514	0/0:14,0:14:26.55:0,27,258	0/0:29,0:29:20.90:0,21,202	1/1:2,20:22:27.37:426,27,0	0/1:8,16:24:42.17:178,0,42	1/1:6,22:28:21.06:320,21,0	1/1:3,21:24:36.10:561,36,0	1/1:13,26:41:49.28:1129,49,0	0/1:4,10:15:7.93:261,0,8	1/1:3,10:13:12.04:196,12,0
chr10	25025727	.	C	CAG	2849.86	PASS	AB=0.971;AC=47;AF=0.870;AN=54;BaseQRankSum=-0.773;DP=555;FS=3.010;HRun=0;HaplotypeScore=144.8666;InbreedingCoeff=0.2341;MQ=67.21;MQ0=12;MQRankSum=1.431;QD=6.03;ReadPosRankSum=0.213;VQSLOD=3.5027;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:26,7:33:5.27:421,5,0	1/1:7,0:7:2.93:25,3,0	1/1:28,0:17:0.47:1,0,0	./.	1/1:15,0:15:2.19:55,2,0	1/1:23,0:23:6.48:68,6,0	1/1:16,0:16:3.84:21,4,0	0/0:18,0:18:2.04:0,2,6	1/1:12,0:12:4.34:52,4,0	1/1:32,0:32:27.69:220,28,0	1/1:10,0:12:14.96:123,15,0	1/1:14,0:14:14.81:146,15,0	1/1:18,0:18:11.89:92,12,0	1/1:18,0:17:14.97:123,15,0	1/1:12,0:12:3.48:42,3,0	1/1:19,0:19:15.34:115,15,0	0/1:19,0:21:1.09:220,0,1	1/1:17,0:20:20.73:135,21,0	1/1:25,0:23:0.68:148,1,0	1/1:24,1:26:27.01:313,27,0	1/1:13,2:15:11.98:134,12,0	0/0:13,0:13:0:0,0,0	0/1:13,0:13:0:0,0,0	1/1:15,0:15:5.80:52,6,0	1/1:21,0:21:9:78,9,0	1/1:28,0:29:21.94:151,22,0	1/1:20,0:20:21.64:181,22,0	0/1:7,0:5:1.27:16,0,1
chr10	25026595	.	G	GA	13087.61	PASS	AB=0.538;AC=51;AF=0.911;AN=56;BaseQRankSum=-7.129;DP=569;FS=6.576;HRun=9;HaplotypeScore=56.7647;InbreedingCoeff=0.6802;MQ=78.40;MQ0=0;MQRankSum=-5.557;QD=24.24;ReadPosRankSum=2.301;VQSLOD=5.7815;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,0:11:17.93:87,18,0	1/1:3,13:16:36.10:398,36,0	0/0:15,0:16:23.38:0,23,187	0/0:12,0:13:17.31:0,17,217	1/1:4,24:29:46.10:724,46,0	1/1:1,27:28:69.19:763,69,0	1/1:7,14:21:42.11:465,42,0	1/1:11,24:35:69.17:754,69,0	1/1:2,10:12:30.08:332,30,0	1/1:4,22:27:69.02:743,69,0	1/1:2,20:22:57.15:630,57,0	1/1:2,10:12:4.03:272,4,0	1/1:4,16:21:51.14:563,51,0	1/1:3,9:12:4.03:273,4,0	1/1:2,17:20:44.95:479,45,0	1/1:4,15:20:44.95:479,45,0	1/1:0,14:14:36.10:398,36,0	1/1:1,11:12:33.09:365,33,0	1/1:6,16:22:51.11:549,51,0	1/1:7,25:32:51.94:723,52,0	1/1:2,7:10:23.90:246,24,0	1/1:2,20:24:54.11:583,54,0	1/1:3,20:25:19.06:439,19,0	1/1:1,12:12:33.09:365,33,0	1/1:4,23:28:54.15:597,54,0	1/1:5,21:27:62.99:668,63,0	1/1:5,27:31:81.22:895,81,0	0/1:2,12:14:16.01:296,0,16
chr10	25027779	.	G	GT	550.77	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-3.553;DP=464;FS=3.968;HRun=8;HaplotypeScore=70.4265;InbreedingCoeff=0.9118;MQ=73.98;MQ0=1;MQRankSum=-1.034;QD=14.49;ReadPosRankSum=-1.618;VQSLOD=3.4389;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:4,14:19:26.91:291,27,0	0/0:5,0:5:15.01:0,15,137	0/0:18,0:16:22.04:0,22,257	0/0:16,0:13:21.71:0,22,175	0/0:29,0:29:81.04:0,81,741	0/0:17,0:17:45.01:0,45,412	0/0:10,0:10:27.01:0,27,247	1/1:8,10:19:33.10:380,33,0	0/0:13,0:13:5.22:0,5,198	0/0:16,0:16:36:0,36,327	0/0:23,0:23:63.02:0,63,569	0/0:16,0:17:38.03:0,38,329	0/0:17,0:17:48.01:0,48,434	0/0:16,0:16:41.93:0,42,368	0/0:22,0:22:63.03:0,63,576	0/0:13,0:13:36.02:0,36,329	0/0:24,0:24:68.97:0,69,616	0/0:9,0:9:15:0,15,137	0/0:24,0:24:54.02:0,54,494	0/0:20,0:20:50.92:0,51,455	0/0:10,0:10:30:0,30,269	0/0:8,0:8:24:0,24,216	0/0:17,1:18:16.39:0,16,399	0/0:15,0:15:42.02:0,42,384	0/0:17,0:17:42.01:0,42,384	0/0:20,1:21:19.39:0,19,429	0/0:15,0:15:42.01:0,42,381	0/0:12,0:12:23.97:0,24,212
chr10	25028242	.	G	GT	1036.10	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-6.452;DP=466;FS=14.768;HRun=8;HaplotypeScore=45.0571;InbreedingCoeff=0.9691;MQ=79.05;MQ0=0;MQRankSum=-0.987;QD=24.67;ReadPosRankSum=-3.515;VQSLOD=1.5755;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,10:12:27.07:302,27,0	0/0:6,0:6:18.01:0,18,165	0/0:13,0:13:18.95:0,19,236	0/0:7,0:8:15:0,15,137	0/0:26,0:26:69.03:0,69,632	0/0:28,0:28:75.03:0,75,686	0/0:6,0:6:18.01:0,18,165	1/1:4,26:30:75.21:855,75,0	0/0:14,0:14:39.02:0,39,357	0/0:13,0:13:36.02:0,36,329	0/0:30,0:30:87.05:0,87,796	0/0:11,0:11:33.01:0,33,298	0/0:18,0:18:48.01:0,48,435	0/0:11,0:12:35.06:0,35,308	0/0:12,0:12:36.02:0,36,330	0/0:18,0:18:48.02:0,48,439	0/0:24,0:24:69.03:0,69,632	0/0:13,0:13:26.22:0,26,245	0/0:23,0:23:60.02:0,60,549	0/0:26,0:26:57.01:0,57,522	0/0:13,0:13:36.02:0,36,329	0/0:8,0:8:21:0,21,192	0/0:17,0:17:45:0,45,405	0/0:12,0:12:35.97:0,36,321	0/0:8,0:8:21.01:0,21,192	0/0:20,1:21:22.40:0,22,460	0/0:37,0:37:99:0,108,988	0/0:7,0:7:18:0,18,165
chr10	25028366	.	TA	T	450.20	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.557;DP=436;FS=4.000;HRun=1;HaplotypeScore=39.5005;InbreedingCoeff=0.9299;MQ=64.09;MQ0=0;MQRankSum=0.161;QD=32.16;ReadPosRankSum=2.155;VQSLOD=3.2673;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:27.01:0,27,341	0/0:3,0:3:9.02:0,9,113	0/0:13,0:12:33:0,33,401	0/0:7,0:7:18.03:0,18,239	0/0:19,0:19:57.11:0,57,733	0/0:18,0:18:54.17:0,54,767	0/0:10,0:10:30.09:0,30,420	0/0:34,0:34:99:0,102,1439	0/0:12,0:12:33.11:0,33,483	0/0:22,0:22:66.20:0,66,916	0/0:20,0:20:60.15:0,60,819	0/0:13,0:13:39.10:0,39,532	0/0:14,0:14:42.11:0,42,575	0/0:10,0:10:30.10:0,30,437	1/1:0,14:14:39.13:545,39,0	0/0:16,0:16:48.15:0,48,683	0/0:20,0:20:60.16:0,60,832	0/0:22,0:22:66.15:0,66,897	0/0:15,0:15:45.13:0,45,607	0/0:22,0:22:66.18:0,66,909	0/0:7,0:7:21.07:0,21,307	0/0:14,0:14:42.14:0,42,614	0/0:11,0:11:33.08:0,33,457	0/0:9,0:9:27.07:0,27,375	0/0:14,0:14:42.11:0,42,577	0/0:23,0:23:69.23:0,69,1008	0/0:35,0:35:99:0,105,1432	0/0:9,0:9:27.09:0,27,394
chr10	25029403	.	C	CTG	981.98	PASS	AB=0.909;AC=22;AF=0.458;AN=48;BaseQRankSum=-0.074;DP=464;FS=11.377;HRun=0;HaplotypeScore=87.1633;InbreedingCoeff=0.1009;MQ=51.32;MQ0=23;MQRankSum=-1.397;QD=3.79;ReadPosRankSum=-2.626;VQSLOD=0.5788;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:2.99:0,3,23	0/1:10,0:10:0.67:66,0,1	./.	./.	0/0:18,0:18:3:0,3,32	1/1:12,0:12:2.98:21,3,0	1/1:18,0:16:2.97:20,3,0	./.	0/1:12,4:16:9.29:197,0,9	1/1:23,1:24:17.94:205,18,0	0/1:18,0:17:0:0,0,0	1/1:7,2:8:3.01:44,3,0	0/1:13,7:21:1.93:116,0,2	0/0:15,0:14:0.47:0,0,1	0/0:10,0:18:2.22:0,2,7	0/1:13,7:20:22.45:77,0,22	0/0:14,0:15:2.84:0,3,14	0/0:7,0:8:2.84:0,3,14	./.	0/0:17,0:17:0.47:0,0,1	0/0:16,0:16:2.98:0,3,22	1/1:15,0:14:7.53:61,8,0	0/1:17,0:16:22.51:38,0,23	1/1:9,13:23:6.02:88,6,0	0/0:10,1:11:3:0,3,32	0/1:21,0:21:32.61:33,0,62	1/1:15,1:26:8.71:68,9,0	0/1:8,0:8:7.56:79,0,8
chr10	25029453	.	G	GTG	845.90	PASS	AB=0.957;AC=22;AF=0.458;AN=48;BaseQRankSum=-1.641;DP=361;FS=2.651;HRun=0;HaplotypeScore=100.1078;InbreedingCoeff=0.1308;MQ=47.09;MQ0=15;MQRankSum=-0.325;QD=3.93;ReadPosRankSum=1.345;VQSLOD=2.3879;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:16:2.92:0,3,23	0/1:9,0:9:0.20:67,0,0	./.	./.	0/0:13,0:12:1.26:0,1,29	1/1:10,0:10:2.81:21,3,0	1/1:15,0:14:2.86:20,3,0	./.	0/1:14,0:14:9.46:197,0,9	1/1:18,0:17:15.40:166,15,0	0/1:14,0:13:0:0,0,0	1/1:7,0:7:3.01:44,3,0	0/1:16,0:16:2.40:115,0,2	0/1:11,5:18:0.04:0,0,0	0/0:20,0:20:4.26:0,4,13	0/1:26,0:25:25.95:75,0,26	0/0:10,0:9:2.84:0,3,14	0/0:3,0:2:2.84:0,3,14	./.	0/0:8,0:7:0.34:0,0,1	0/0:11,0:10:2.98:0,3,22	1/1:9,0:9:7.53:61,8,0	0/1:10,0:11:22.51:38,0,23	1/1:20,0:20:6.02:88,6,0	0/0:9,0:9:2.99:0,3,32	0/0:14,0:14:0.88:0,1,66	1/1:24,0:23:5.62:44,6,0	0/1:2,0:3:10.57:38,0,11
chr10	25029454	.	AAT	A	354.97	PASS	AB=1.000;AC=11;AF=0.212;AN=52;BaseQRankSum=-1.273;DP=358;FS=4.430;HRun=0;HaplotypeScore=93.4566;InbreedingCoeff=0.6418;MQ=47.17;MQ0=15;MQRankSum=1.984;QD=5.22;ReadPosRankSum=1.452;VQSLOD=2.6875;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,13:16:5.89:76,6,0	0/0:9,0:9:24.07:0,24,364	./.	0/0:9,0:2:2.04:0,2,6	0/0:13,0:12:18.06:0,18,254	0/0:10,0:10:9.03:0,9,136	0/1:15,0:14:7.81:8,0,370	0/0:20,0:16:33.06:0,33,429	0/0:13,0:13:18.06:0,18,268	0/0:18,0:17:39.13:0,39,631	0/0:15,0:13:18.06:0,18,271	0/0:7,0:7:18.05:0,18,248	0/0:16,0:16:15.80:0,16,322	0/0:18,0:18:21.07:0,21,296	0/0:21,0:21:30.10:0,30,445	0/0:26,0:25:45.14:0,45,617	1/1:3,7:9:5.98:75,6,0	./.	1/1:1,7:7:21.07:265,21,0	1/1:0,7:6:2.81:38,3,0	1/1:4,7:10:3.01:38,3,0	0/0:8,0:8:5.93:0,6,54	0/0:11,0:11:9.03:0,9,121	0/0:20,0:20:24.07:0,24,357	0/0:9,0:9:24.08:0,24,395	0/0:14,0:14:33.10:0,33,522	0/0:23,0:22:32.98:0,33,477	0/0:3,0:3:3.01:0,3,38
chr10	25029469	.	TCA	T	452.51	PASS	AC=2;AF=0.038;AN=52;BaseQRankSum=-0.263;DP=338;FS=0.000;HRun=0;HaplotypeScore=96.5643;InbreedingCoeff=0.4125;MQ=51.51;MQ0=7;MQRankSum=0.186;QD=23.82;ReadPosRankSum=-2.398;VQSLOD=3.5312;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:5.98:0,6,47	0/0:10,0:10:17.95:0,18,269	0/0:13,0:5:15.02:0,15,224	0/0:20,0:10:24.06:0,24,376	0/0:9,0:9:12.04:0,12,201	0/0:9,0:9:3.01:0,3,51	0/0:12,0:12:24.08:0,24,376	1/1:4,15:17:44.17:545,44,0	0/0:9,0:9:6.01:0,6,68	0/0:15,0:14:26.88:0,27,417	0/0:14,0:13:13.29:0,13,204	0/0:8,0:8:9.02:0,9,128	0/0:20,0:20:21:0,21,319	0/0:15,0:15:9.03:0,9,143	0/0:16,0:16:18.05:0,18,280	0/0:24,0:23:14.40:0,14,210	0/0:8,0:8:3.01:0,3,33	./.	0/0:10,0:10:26.81:0,27,332	0/0:8,0:7:3.01:0,3,37	0/0:7,0:7:3.01:0,3,36	0/0:7,0:7:0:0,0,0	0/0:9,0:9:3.01:0,3,51	0/0:16,0:16:15.05:0,15,244	0/0:10,0:10:12.04:0,12,202	0/0:15,0:14:35.53:0,36,494	0/0:20,0:20:36.12:0,36,603	./.
chr10	25029492	.	C	CAT	300.23	PASS	AB=0.921;AC=14;AF=0.280;AN=50;BaseQRankSum=5.147;DP=329;FS=7.267;HRun=0;HaplotypeScore=123.7618;InbreedingCoeff=0.0529;MQ=39.81;MQ0=3;MQRankSum=-4.173;QD=2.16;ReadPosRankSum=-1.435;VQSLOD=1.8406;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:8,3:11:0:1,0,0	0/0:7,0:7:11.78:0,12,180	0/0:7,0:4:12.04:0,12,182	0/0:11,0:7:21.07:0,21,317	0/0:15,2:17:11.27:0,11,178	0/0:15,0:15:1.84:0,2,44	0/0:8,2:11:14.78:0,15,206	0/0:14,0:14:2.98:0,3,527	1/1:5,1:6:0.47:1,0,0	0/1:21,1:20:99:149,0,479	0/0:15,2:16:7.66:0,8,113	0/1:7,1:8:5.22:5,0,43	0/0:18,2:20:10.46:0,10,206	0/1:13,0:13:1.77:2,0,40	0/0:17,1:18:8.52:0,9,134	0/1:22,2:24:22.32:22,0,80	1/1:6,0:6:0.47:1,0,0	./.	0/1:10,0:8:24.95:25,0,245	1/1:11,1:12:0.47:1,0,0	./.	0/1:5,1:6:0.01:0,0,0	0/0:5,1:6:3.01:0,3,45	0/0:11,0:11:11.78:0,12,181	0/0:8,2:10:9.03:0,9,133	0/1:20,1:19:99:200,0,385	0/0:19,0:19:25.59:0,26,367	./.
chr10	25030182	.	G	GT	2491.74	PASS	AB=0.975;AC=46;AF=0.821;AN=56;BaseQRankSum=-2.157;DP=530;FS=5.753;HRun=11;HaplotypeScore=108.6041;InbreedingCoeff=0.0260;MQ=58.89;MQ0=11;MQRankSum=-0.381;QD=4.83;ReadPosRankSum=-0.579;VQSLOD=1.6864;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:19:8.91:75,9,0	1/1:8,0:8:0.94:1,1,0	0/1:33,0:17:47.75:80,0,48	0/1:36,0:18:19.49:19,0,75	1/1:23,3:26:20.03:188,20,0	1/1:26,0:26:7.66:36,8,0	1/1:10,1:12:2.16:57,2,0	1/1:29,0:26:37.35:130,37,0	0/1:12,0:12:12.11:36,0,12	1/1:3,16:19:26.62:291,27,0	1/1:8,7:16:16.28:152,16,0	1/1:9,5:15:23.57:189,24,0	1/1:8,10:18:3.80:206,4,0	1/1:19,3:22:15.29:124,15,0	0/1:14,0:26:5.81:60,0,6	1/1:13,0:13:4.53:15,5,0	0/1:12,0:20:17.05:29,0,17	0/0:4,0:14:14.03:0,14,40	1/1:14,0:20:6.85:60,7,0	0/1:16,0:24:2.28:53,0,2	0/1:5,0:12:5.95:6,0,17	1/1:3,7:10:14.98:150,15,0	1/1:12,1:13:4.34:44,4,0	0/1:9,2:11:3.16:23,0,3	1/1:15,1:16:5.91:46,6,0	1/1:22,0:22:40.53:299,41,0	1/1:10,13:21:20.24:245,20,0	1/1:9,0:9:2.90:16,3,0
chr10	25030187	.	T	TG	785.37	PASS	AB=0.963;AC=18;AF=0.321;AN=56;BaseQRankSum=-0.383;DP=525;FS=0.433;HRun=0;HaplotypeScore=111.5994;InbreedingCoeff=-0.2062;MQ=55.17;MQ0=13;MQRankSum=-0.740;QD=2.42;ReadPosRankSum=6.413;VQSLOD=2.1871;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:18,0:18:11.14:11,0,17	0/0:8,0:8:5.98:0,6,47	0/0:31,0:14:16.07:0,16,178	0/0:31,0:14:26.71:0,27,233	0/1:25,0:25:14.28:34,0,14	0/0:26,0:26:16.34:0,16,99	0/0:12,0:12:5.69:0,6,75	0/0:28,0:25:69.62:0,70,483	0/0:13,0:13:8.20:0,8,84	0/1:22,0:21:25.02:25,0,115	0/1:15,0:15:0.97:1,0,107	0/1:17,0:17:4.63:5,0,119	0/1:18,0:18:7.63:8,0,113	0/1:23,0:23:4.08:4,0,23	0/1:17,8:24:1:215,0,1	0/1:15,0:14:0.76:1,0,7	0/1:17,5:22:32.56:139,0,33	0/1:12,0:12:13.77:31,0,14	0/1:16,4:19:5.70:181,0,6	1/1:13,11:24:8.24:191,8,0	0/1:10,0:10:21.87:27,0,22	0/1:11,0:11:29.16:29,0,32	0/0:14,0:13:6.03:0,6,79	0/0:12,0:11:11.90:0,12,125	0/0:16,0:16:0.15:0,0,44	0/1:22,0:22:3.40:3,0,112	0/1:25,0:23:23.86:24,0,112	0/0:9,0:9:2.22:0,2,7
chr10	25030189	.	T	TTTTTTTGTTTTG	11598.05	PASS	AB=0.813;AC=48;AF=0.857;AN=56;BaseQRankSum=-6.359;DP=562;FS=3.779;HRun=0;HaplotypeScore=155.9111;InbreedingCoeff=0.0779;MQ=54.75;MQ0=13;MQRankSum=-1.842;QD=21.88;ReadPosRankSum=-1.082;VQSLOD=4.0284;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:2,0:20:8.24:276,8,0	1/1:1,5:10:5.81:189,6,0	0/1:29,0:13:3.57:4,0,73	0/0:32,0:13:10.66:0,11,114	1/1:4,0:28:26.96:298,27,0	1/1:1,0:29:12.04:490,12,0	1/1:4,0:16:14.53:472,15,0	1/1:5,0:24:56.67:419,57,0	0/1:2,0:15:17.69:279,0,18	1/1:22,0:21:46.05:480,46,0	1/1:16,0:16:33.74:506,34,0	1/1:15,1:16:42.27:629,42,0	1/1:18,0:19:13.81:550,14,0	1/1:4,0:24:14.34:310,14,0	0/1:18,0:25:23.38:1057,0,23	1/1:2,8:20:3.89:178,4,0	1/1:16,0:22:10.59:789,11,0	0/1:11,0:11:34.30:56,0,34	1/1:15,0:18:5.87:634,6,0	0/1:14,0:25:19.68:1205,0,20	0/1:10,0:11:17.98:293,0,18	1/1:12,0:12:21.16:157,21,0	1/1:4,0:18:5.38:280,5,0	1/1:12,0:11:17.99:317,18,0	1/1:2,0:16:5.51:150,6,0	1/1:2,0:27:61.28:805,61,0	1/1:26,0:24:36.83:634,37,0	1/1:0,0:11:3.01:141,3,0
chr10	25030648	.	GAAC	G	984.31	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-1.911;DP=670;FS=5.720;HRun=0;HaplotypeScore=130.0991;InbreedingCoeff=0.9989;MQ=76.79;MQ0=0;MQRankSum=-4.162;QD=41.01;ReadPosRankSum=-2.392;VQSLOD=4.3968;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,108,2474	0/0:13,0:13:39.13:0,39,916	0/0:22,0:22:66.15:0,66,1369	0/0:22,0:21:60.13:0,60,1185	0/0:31,0:31:93.31:0,93,2128	0/0:27,0:27:81.26:0,81,1825	0/0:18,0:18:54.17:0,54,1195	1/1:2,22:23:63.20:1079,63,0	0/0:24,0:24:72.25:0,72,1678	0/0:29,0:29:87.28:0,87,1970	0/0:25,0:25:72.23:0,72,1657	0/0:21,0:21:63.20:0,63,1423	0/0:23,0:23:66.23:0,66,1531	0/0:23,0:23:69.22:0,69,1567	0/0:18,0:18:48.15:0,48,1089	0/0:22,0:22:66.22:0,66,1477	0/0:16,0:16:45.15:0,45,1064	0/0:10,0:10:30.06:0,30,658	0/0:26,0:26:75.25:0,75,1615	0/0:40,0:40:99:0,117,2723	0/0:25,0:25:69.20:0,69,1558	0/0:21,0:21:63.19:0,63,1377	0/0:35,0:35:99:0,105,2368	0/0:21,0:21:63.14:0,63,1324	0/0:29,0:29:87.27:0,87,1945	0/0:29,0:29:84.28:0,84,1946	0/0:29,0:29:84.27:0,84,1916	0/0:10,0:10:30.10:0,30,709
chr10	25030661	.	GT	G	3227.04	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=5.551;DP=659;FS=0.804;HRun=6;HaplotypeScore=86.0889;InbreedingCoeff=0.9995;MQ=76.33;MQ0=0;MQRankSum=-0.769;QD=24.82;ReadPosRankSum=1.684;VQSLOD=3.5061;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:87.24:0,87,1112	0/0:12,0:12:36.12:0,36,474	0/0:21,0:21:45.14:0,45,571	0/0:18,0:18:38.42:0,38,455	0/0:31,0:31:93.23:0,93,1173	0/0:25,0:25:72.23:0,72,947	0/0:19,0:19:48.16:0,48,631	0/0:28,0:28:81.26:0,81,1053	0/0:22,0:22:60.20:0,60,789	0/0:32,0:32:93.29:0,93,1208	0/0:26,0:26:66.18:0,66,826	0/0:22,0:22:66.21:0,66,868	0/0:21,0:21:63.20:0,63,822	0/0:25,0:25:75.23:0,75,972	1/1:2,20:22:48.12:516,48,0	0/0:23,0:23:69.21:0,69,893	1/1:1,16:17:45.11:484,45,0	1/1:0,13:13:33.08:355,33,0	1/1:4,12:16:36.05:387,36,0	1/1:3,37:40:99:1126,105,0	1/1:1,21:22:51.13:548,51,0	0/0:22,0:22:66.21:0,66,855	0/0:35,0:35:99:0,102,1341	0/0:15,0:15:45.14:0,45,578	0/0:26,0:26:72.20:0,72,918	0/0:31,0:31:87.27:0,87,1129	0/0:33,0:33:96.28:0,96,1231	0/0:8,0:8:24.08:0,24,316
chr10	25033951	.	G	GT	1176.54	PASS	AB=0.836;AC=10;AF=0.179;AN=56;BaseQRankSum=2.688;DP=587;FS=4.157;HRun=2;HaplotypeScore=109.4701;InbreedingCoeff=0.6831;MQ=67.29;MQ0=1;MQRankSum=-3.989;QD=11.42;ReadPosRankSum=-2.055;VQSLOD=1.3814;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:75.21:0,75,910	0/0:2,0:2:6.02:0,6,73	0/0:13,0:10:14.82:0,15,149	0/0:12,0:11:21.94:0,22,213	0/0:36,0:36:99:0,108,1287	0/0:26,0:26:63.19:0,63,765	0/0:12,0:12:30.05:0,30,348	0/0:37,0:37:96.30:0,96,1176	0/0:13,0:13:27.08:0,27,327	0/0:33,0:33:93.29:0,93,1131	0/0:32,0:32:87.26:0,87,1043	0/0:24,0:24:63.19:0,63,761	0/0:19,0:19:51.16:0,51,618	0/0:25,0:25:69.20:0,69,816	0/1:14,1:16:11.78:12,0,109	0/0:21,0:21:48.15:0,48,581	1/1:7,5:12:23.53:228,24,0	0/1:13,5:17:36.14:164,0,36	1/1:12,5:15:16.03:238,16,0	1/1:13,18:34:46.69:663,47,0	1/1:5,1:6:3:31,3,0	0/0:19,0:19:57.17:0,57,678	0/0:26,0:26:78.24:0,78,945	0/0:6,0:6:15.05:0,15,181	0/0:28,0:28:84.24:0,84,1006	0/0:28,0:28:75.23:0,75,913	0/0:30,0:30:87.06:0,87,1027	0/0:12,0:12:36.11:0,36,435
chr10	25033954	.	AT	A	9230.77	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-10.460;DP=574;FS=21.980;HRun=10;HaplotypeScore=78.4741;InbreedingCoeff=0.9367;MQ=68.37;MQ0=1;MQRankSum=4.772;QD=22.03;ReadPosRankSum=3.632;VQSLOD=3.8985;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:75.05:0,75,802	1/1:0,2:2:6:52,6,0	0/0:12,0:8:8.96:0,9,84	0/0:14,0:13:26.56:0,27,241	1/1:1,35:36:99:911,105,0	1/1:3,22:25:53.98:469,54,0	1/1:3,7:10:17.99:156,18,0	1/1:8,27:35:80.91:692,81,0	1/1:1,11:12:26.99:234,27,0	1/1:1,30:31:89.98:781,90,0	1/1:4,28:32:71.95:624,72,0	1/1:1,23:25:59.02:501,59,0	1/1:2,18:20:44.98:391,45,0	1/1:0,24:24:65.99:573,66,0	0/0:18,0:18:15.61:0,16,349	1/1:1,20:21:44.99:391,45,0	0/0:11,0:11:14.68:0,15,73	0/0:16,0:15:21.21:0,21,158	0/0:17,0:15:32.61:0,33,208	0/0:33,0:33:71.89:0,72,406	0/0:6,0:6:2.84:0,3,14	1/1:1,19:20:50.97:441,51,0	1/1:4,22:26:35.80:540,36,0	1/1:0,5:6:15:130,15,0	1/1:0,27:27:80.98:703,81,0	1/1:3,23:26:68.98:599,69,0	1/1:1,28:29:83.98:729,84,0	1/1:0,12:12:35.99:313,36,0
chr10	25033992	.	CTCT	C	3050.40	PASS	AB=0.571;AC=11;AF=0.196;AN=56;BaseQRankSum=3.784;DP=597;FS=1.557;HRun=0;HaplotypeScore=114.0488;InbreedingCoeff=0.8780;MQ=71.42;MQ0=0;MQRankSum=-4.466;QD=33.89;ReadPosRankSum=0.310;VQSLOD=4.1165;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:63.22:0,63,1395	0/0:7,0:7:21.07:0,21,469	0/0:24,0:23:60.01:0,60,1194	0/0:20,0:18:17.28:0,17,692	0/0:43,0:43:99:0,123,2612	0/0:26,0:26:63.22:0,63,1385	0/0:19,0:19:54.18:0,54,1161	0/0:25,0:25:66.23:0,66,1412	0/0:16,0:16:48.16:0,48,1017	0/0:34,0:34:96.33:0,96,2135	0/0:27,0:27:78.07:0,78,1741	0/0:26,0:26:75.26:0,75,1674	0/0:22,0:22:60.19:0,60,1276	0/0:26,0:26:72.21:0,72,1550	1/1:2,16:18:45.15:734,45,0	0/0:22,0:22:63.20:0,63,1342	1/1:0,8:8:18.06:294,18,0	0/1:3,9:12:38.61:319,0,39	1/1:2,13:13:33.11:488,33,0	1/1:6,24:30:69.23:1102,69,0	1/1:1,6:7:18.06:292,18,0	0/0:24,0:24:72.25:0,72,1605	0/0:23,0:23:69.24:0,69,1503	0/0:8,0:8:21.54:0,22,468	0/0:25,0:25:75.26:0,75,1651	0/0:31,0:31:90.31:0,90,2001	0/0:31,0:31:90.31:0,90,2008	0/0:6,0:6:18.06:0,18,402
chr10	25035875	.	T	TG	991.92	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-2.933;DP=639;FS=8.564;HRun=7;HaplotypeScore=92.0927;InbreedingCoeff=0.9617;MQ=68.36;MQ0=1;MQRankSum=-0.528;QD=26.10;ReadPosRankSum=0.995;VQSLOD=3.7922;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,33:38:90.28:1087,90,0	0/0:6,0:6:11.99:0,12,108	0/0:40,0:33:65.09:0,65,608	0/0:16,0:15:35.10:0,35,340	0/0:14,0:14:36.05:0,36,347	0/0:25,0:25:54.07:0,54,519	0/0:16,0:16:45.05:0,45,428	0/0:33,0:33:84.13:0,84,807	0/0:21,0:21:51.06:0,51,488	0/0:23,0:24:56.45:0,56,527	0/0:15,0:15:36.04:0,36,342	0/0:28,0:28:78.09:0,78,743	0/0:33,0:33:93.14:0,93,898	0/0:17,0:17:48.08:0,48,464	0/0:33,0:33:87.10:0,87,829	0/0:22,0:22:63.09:0,63,605	0/0:15,0:15:39.01:0,39,367	0/0:20,1:21:20.89:0,21,477	0/0:26,0:26:60.09:0,60,579	0/0:23,0:23:63.09:0,63,608	0/0:39,0:39:90.12:0,90,865	0/0:22,0:22:57.08:0,57,545	0/0:17,0:17:45.05:0,45,429	0/0:17,0:17:42.06:0,42,405	0/0:19,0:19:51.07:0,51,487	0/0:24,0:24:69.11:0,69,666	0/0:28,0:28:81.11:0,81,773	0/0:7,0:7:21.03:0,21,202
chr10	25037907	.	G	GTT	8492.46	PASS	AB=0.556;AC=47;AF=0.839;AN=56;BaseQRankSum=-4.316;DP=444;FS=9.851;HRun=11;HaplotypeScore=61.6825;InbreedingCoeff=0.8386;MQ=78.91;MQ0=1;MQRankSum=-3.297;QD=23.33;ReadPosRankSum=2.520;VQSLOD=3.5718;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,9:16:17.97:235,18,0	1/1:1,4:6:14.54:182,15,0	0/0:15,0:14:15.24:0,15,173	0/0:17,0:15:23.62:0,24,217	1/1:4,14:19:41.58:550,42,0	1/1:2,17:22:59.17:779,59,0	1/1:1,7:8:18.06:261,18,0	0/0:29,0:29:67.21:0,67,624	1/1:3,9:12:27.09:380,27,0	1/1:3,16:21:50.63:664,51,0	1/1:4,6:11:20.51:245,21,0	1/1:3,10:15:35.09:446,35,0	1/1:1,12:13:27.09:390,27,0	1/1:1,12:13:21.07:304,21,0	0/0:18,0:18:21.12:0,21,383	1/1:1,16:18:44.59:593,45,0	1/1:1,0:23:44.92:154,45,0	1/1:3,0:9:12.48:43,12,0	1/1:4,0:18:33.42:142,33,0	0/1:4,0:20:16.77:91,0,17	1/1:2,0:16:26.77:91,27,0	1/1:2,6:9:14.37:158,14,0	1/1:2,11:16:33.36:416,33,0	1/1:1,8:11:23.05:278,23,0	1/1:3,9:12:27.09:391,27,0	1/1:3,13:18:40.96:498,41,0	1/1:4,24:26:69.23:999,69,0	1/1:4,4:9:15.05:202,15,0
chr10	25039364	.	GT	G	16134.46	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=13.422;DP=598;FS=0.324;HRun=1;HaplotypeScore=89.7446;InbreedingCoeff=0.9829;MQ=90.45;MQ0=0;MQRankSum=-6.261;QD=39.45;ReadPosRankSum=6.707;VQSLOD=4.6393;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,28:28:81.27:1132,81,0	1/1:0,9:9:21.07:294,21,0	0/0:19,0:19:57.19:0,57,891	0/0:29,0:29:56.87:0,57,1118	1/1:0,30:30:87.29:1217,87,0	1/1:0,30:30:87.29:1217,87,0	1/1:0,14:14:36.12:504,36,0	0/0:31,0:31:90.28:0,90,1376	1/1:0,23:23:63.21:881,63,0	1/1:0,27:27:81.27:1133,81,0	1/1:0,20:20:51.17:713,51,0	1/1:0,16:16:45.15:629,45,0	1/1:0,24:24:66.22:923,66,0	1/1:0,21:21:57.19:797,57,0	0/0:19,0:19:57.17:0,57,865	1/1:0,26:26:78.26:1091,78,0	0/0:18,0:18:51.17:0,51,813	0/0:9,0:9:27.09:0,27,431	0/0:22,0:22:60.19:0,60,935	0/0:21,0:21:63.20:0,63,980	0/0:21,0:21:57.19:0,57,906	1/1:0,17:17:51.17:713,51,0	1/1:0,23:23:66.22:923,66,0	1/1:0,21:21:60.20:839,60,0	1/1:0,22:22:63.21:881,63,0	1/1:0,22:22:66.19:903,66,0	1/1:0,34:34:90.30:1259,90,0	1/1:0,2:2:6.02:84,6,0
chr10	25039878	.	CA	C	10837.25	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=4.113;DP=608;FS=1.082;HRun=10;HaplotypeScore=67.1624;InbreedingCoeff=0.9847;MQ=68.81;MQ0=3;MQRankSum=-1.297;QD=21.25;ReadPosRankSum=4.817;VQSLOD=5.5393;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:55.37:0,55,585	1/1:1,13:14:23.99:208,24,0	0/0:20,1:15:17.26:0,17,141	0/0:23,0:16:17.61:0,18,196	1/1:3,33:36:99:861,100,0	1/1:2,13:16:41.03:345,41,0	1/1:4,15:19:38.99:339,39,0	0/0:29,0:30:75.19:0,75,823	1/1:4,18:22:47.98:417,48,0	1/1:2,26:28:74.97:651,75,0	1/1:2,27:29:56.69:629,57,0	1/1:3,16:19:41.98:365,42,0	1/1:2,22:24:59.98:521,60,0	1/1:3,21:24:59.98:520,60,0	1/1:1,22:23:56.99:495,57,0	1/1:2,22:24:62.98:547,63,0	1/1:1,14:15:29.99:260,30,0	1/1:3,4:7:12:104,12,0	1/1:3,18:21:53.96:462,54,0	1/1:2,22:24:56.96:494,57,0	1/1:1,8:9:23.99:208,24,0	1/1:2,18:20:50.99:443,51,0	1/1:2,27:29:77.88:677,78,0	1/1:2,14:16:41.99:365,42,0	1/1:2,25:27:65.98:573,66,0	1/1:4,24:27:71.98:625,72,0	1/1:7,18:25:53.97:468,54,0	1/1:1,10:11:29.99:260,30,0
chr10	25040916	.	CAA	C	6019.30	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-0.027;DP=323;FS=1.101;HRun=10;HaplotypeScore=57.7015;InbreedingCoeff=0.9480;MQ=71.19;MQ0=0;MQRankSum=-1.033;QD=27.74;ReadPosRankSum=3.598;VQSLOD=4.8945;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,9:9:27.07:301,27,0	1/1:1,6:7:18.04:201,18,0	0/0:6,0:6:9.03:0,9,143	0/0:9,0:8:12.01:0,12,136	1/1:2,17:19:36.06:401,36,0	1/1:0,15:15:42.11:468,42,0	1/1:2,7:9:15.04:167,15,0	0/0:8,0:24:42.93:0,43,164	1/1:1,7:8:21.05:234,21,0	1/1:1,9:10:27.07:301,27,0	1/1:0,21:21:57.14:635,57,0	1/1:0,3:3:9.02:100,9,0	1/1:1,15:16:42.11:468,42,0	1/1:0,9:9:27.07:301,27,0	0/0:13,0:13:36.12:0,36,571	1/1:0,9:9:24.06:268,24,0	0/0:1,0:10:22.46:0,22,77	0/0:0,0:6:14.97:0,15,51	0/0:2,0:18:40.17:0,40,141	0/0:2,0:15:29.94:0,30,103	0/0:2,0:5:7.49:0,7,26	1/1:1,7:8:21.05:234,21,0	1/1:1,13:14:30.07:334,30,0	1/1:2,5:7:15.04:167,15,0	1/1:3,15:18:39.10:435,39,0	1/1:0,16:16:48.13:534,48,0	1/1:1,12:13:30.07:334,30,0	1/1:1,5:6:12.03:134,12,0
chr10	25041027	.	TA	T	1537.69	PASS	AC=8;AF=0.154;AN=52;BaseQRankSum=-8.293;DP=311;FS=3.245;HRun=9;HaplotypeScore=56.0801;InbreedingCoeff=0.8974;MQ=71.01;MQ0=0;MQRankSum=-0.976;QD=21.66;ReadPosRankSum=0.762;VQSLOD=4.4137;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:4:12.03:0,12,135	0/0:12,0:12:30.07:0,30,328	0/0:12,0:7:20.91:0,21,192	0/0:6,0:5:7.64:0,8,51	0/0:27,0:27:81.21:0,81,896	0/0:14,0:15:35.96:0,36,379	0/0:8,0:8:15.04:0,15,168	0/0:19,0:19:42.09:0,42,458	0/0:8,0:8:18.04:0,18,190	0/0:21,0:21:42.06:0,42,567	0/0:14,0:14:33.09:0,33,370	0/0:5,0:5:15.04:0,15,168	0/0:11,0:11:33.09:0,33,369	0/0:7,0:7:18.04:0,18,192	0/0:4,0:4:12.04:0,12,138	0/0:7,0:8:23.93:0,24,250	1/1:0,17:17:45.02:412,45,0	1/1:2,8:10:24.01:220,24,0	1/1:1,16:17:47.99:430,48,0	1/1:2,25:27:71.89:633,72,0	./.	./.	0/0:5,0:5:9.02:0,9,100	0/0:3,0:3:6.02:0,6,67	0/0:14,0:14:33.07:0,33,359	0/0:17,0:17:48.59:0,49,533	0/0:14,0:14:33.09:0,33,371	0/0:6,0:6:12.03:0,12,129
chr10	25041038	.	C	CT	6962.54	PASS	AC=36;AF=0.692;AN=52;BaseQRankSum=-11.193;DP=322;FS=0.485;HRun=4;HaplotypeScore=42.1031;InbreedingCoeff=0.9349;MQ=78.25;MQ0=0;MQRankSum=-0.217;QD=33.00;ReadPosRankSum=2.907;VQSLOD=5.0213;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,4:5:9.03:123,9,0	1/1:1,12:13:24.08:328,24,0	0/0:11,0:7:20.55:0,21,212	0/0:7,1:8:8.89:0,9,72	1/1:2,31:33:90.29:1209,90,0	1/1:0,13:13:36.12:491,36,0	1/1:0,6:6:15.05:205,15,0	0/0:18,0:18:48.13:0,48,536	1/1:1,8:9:18.06:246,18,0	1/1:2,18:20:54.17:720,54,0	1/1:1,15:16:42.13:549,42,0	1/1:0,6:6:15.05:205,15,0	1/1:1,11:12:33.11:451,33,0	1/1:0,7:7:18.06:245,18,0	0/0:5,0:5:12.03:0,12,136	1/1:0,10:10:24.08:327,24,0	0/0:19,0:19:51.13:0,51,556	0/0:9,0:9:27.03:0,27,264	0/0:16,0:16:33.04:0,33,349	0/0:24,0:24:60.15:0,60,653	./.	./.	1/1:0,3:3:9.03:123,9,0	1/1:0,3:3:6.02:82,6,0	1/1:0,13:13:33.11:451,33,0	1/1:2,17:19:51.17:696,51,0	1/1:1,11:12:23.78:328,24,0	1/1:3,8:11:17.13:183,17,0
chr10	25041422	.	GA	G	2558.20	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=10.895;DP=625;FS=0.809;HRun=8;HaplotypeScore=64.4281;InbreedingCoeff=0.9747;MQ=78.82;MQ0=0;MQRankSum=-2.088;QD=21.32;ReadPosRankSum=1.445;VQSLOD=3.8603;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:20:53.59:260,54,0	0/0:4,0:4:9.03:0,9,109	0/0:19,0:19:47.50:0,48,492	0/0:17,0:17:24.77:0,25,392	0/0:33,0:33:81.25:0,81,974	0/0:23,1:24:34.22:0,34,695	0/0:17,0:17:51.16:0,51,616	0/0:38,0:38:96.29:0,96,1160	0/0:16,0:16:45.14:0,45,544	0/0:36,0:36:66.19:0,66,779	0/0:23,0:23:66.20:0,66,794	0/0:19,0:19:54.15:0,54,641	0/0:29,0:29:84.23:0,84,993	0/0:25,0:25:66.20:0,66,797	0/0:20,0:21:57.03:0,57,655	0/0:16,0:16:39.12:0,39,471	1/1:2,17:19:45.07:434,45,0	1/1:1,7:8:18.02:174,18,0	1/1:1,17:18:51.07:486,51,0	1/1:4,33:37:93.14:898,93,0	1/1:1,17:18:51.08:492,51,0	0/0:23,0:23:54.17:0,54,651	0/0:22,0:22:57.17:0,57,689	0/0:20,0:20:60.18:0,60,725	0/0:30,0:30:78.24:0,78,942	0/0:32,0:32:84.26:0,84,1015	0/0:37,0:37:99:0,102,1232	0/0:4,0:4:9.03:0,9,109
chr10	25043291	.	CAA	C	6807.91	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-5.362;DP=350;FS=4.525;HRun=12;HaplotypeScore=46.4531;InbreedingCoeff=0.6034;MQ=66.01;MQ0=6;MQRankSum=0.182;QD=21.82;ReadPosRankSum=3.161;VQSLOD=3.9824;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,26:31:66.10:666,66,0	1/1:0,1:1:3.01:31,3,0	0/0:24,0:7:9:0,9,111	0/0:13,0:9:17.34:0,17,162	1/1:1,15:15:39.08:397,39,0	1/1:2,15:17:36.07:366,36,0	1/1:2,7:9:18.03:183,18,0	1/1:1,15:16:41.93:412,42,0	1/1:1,7:8:21.05:214,21,0	1/1:2,12:14:36.08:366,36,0	1/1:2,19:22:54.10:549,54,0	1/1:1,5:7:13.84:127,14,0	1/1:3,7:9:15.02:153,15,0	1/1:0,9:9:21.05:214,21,0	1/1:5,6:12:0.14:171,0,0	1/1:0,6:6:15.03:153,15,0	1/1:3,13:16:36.06:366,36,0	1/1:4,6:10:5.71:113,6,0	1/1:6,17:23:54.09:549,54,0	1/1:1,8:10:26.80:256,27,0	1/1:2,6:8:15.03:153,15,0	1/1:0,1:1:3.01:31,3,0	1/1:3,1:4:2.99:31,3,0	1/1:1,5:6:15.03:153,15,0	1/1:1,11:12:24.04:244,24,0	1/1:3,14:17:39.05:388,39,0	1/1:5,14:20:40.85:384,41,0	1/1:2,4:6:14.98:142,15,0
chr10	25045055	.	AG	A	4065.89	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-6.552;DP=604;FS=2.324;HRun=4;HaplotypeScore=109.4663;InbreedingCoeff=0.9964;MQ=65.45;MQ0=1;MQRankSum=-0.749;QD=31.76;ReadPosRankSum=0.760;VQSLOD=3.2830;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,102,1380	0/0:17,0:17:48.16:0,48,665	0/0:28,0:25:26.08:0,26,698	0/0:29,0:26:61.84:0,62,835	0/0:23,0:23:63.21:0,63,880	0/0:17,0:17:39.12:0,39,530	0/0:29,0:29:72.23:0,72,991	0/0:28,0:28:75.24:0,75,1034	0/0:26,0:26:75.25:0,75,1036	0/0:21,0:21:51.17:0,51,710	0/0:23,0:23:60.20:0,60,840	0/0:19,0:19:50.88:0,51,698	0/0:18,0:18:51.17:0,51,703	0/0:22,0:22:66.22:0,66,908	1/1:0,28:28:78.24:930,78,0	0/0:20,0:20:54.18:0,54,756	1/1:3,22:25:60.18:719,60,0	1/1:4,11:15:36.11:429,36,0	1/1:2,13:15:39.12:468,39,0	1/1:2,23:25:72.21:850,72,0	1/1:1,19:20:57.15:669,57,0	0/0:24,0:24:60.20:0,60,840	0/0:23,0:23:60.20:0,60,840	0/0:20,0:20:54.18:0,54,746	0/0:11,0:11:30.09:0,30,400	0/0:18,0:18:54.18:0,54,753	0/0:14,0:13:39.13:0,39,544	0/0:6,0:6:15.05:0,15,207
chr10	25045074	.	A	AG	13534.71	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-11.900;DP=587;FS=2.554;HRun=4;HaplotypeScore=88.3792;InbreedingCoeff=0.9991;MQ=66.34;MQ0=0;MQRankSum=-4.461;QD=35.34;ReadPosRankSum=3.657;VQSLOD=5.0417;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,30:34:75.25:1019,75,0	1/1:1,13:14:39.13:533,39,0	0/0:30,0:29:62.08:0,62,662	0/0:27,0:24:55.80:0,56,629	1/1:5,24:29:75.25:1023,75,0	1/1:2,12:14:42.14:573,42,0	1/1:5,19:24:57.18:764,57,0	0/0:27,0:27:70.79:0,71,831	1/1:4,23:27:78.24:1037,78,0	1/1:1,19:20:54.18:735,54,0	1/1:1,22:23:63.21:861,63,0	1/1:2,16:18:45.15:608,45,0	1/1:2,16:18:54.12:687,54,0	1/1:5,18:23:63.19:843,63,0	0/0:28,0:28:78.20:0,78,873	1/1:1,19:20:51.17:697,51,0	0/0:21,0:21:60.17:0,60,680	0/0:14,0:14:36.10:0,36,408	0/0:13,0:13:36.10:0,36,408	0/0:26,0:26:75.21:0,75,848	0/0:18,0:18:48.13:0,48,544	1/1:2,24:26:66.22:899,66,0	1/1:4,22:26:72.20:963,72,0	1/1:5,11:16:39.12:507,39,0	1/1:4,12:16:42.14:566,42,0	1/1:5,13:18:42.14:567,42,0	1/1:3,7:10:27.09:366,27,0	1/1:1,6:7:21.07:287,21,0
chr10	25045120	.	T	TA	10956.62	PASS	AB=0.625;AC=49;AF=0.875;AN=56;BaseQRankSum=-4.560;DP=514;FS=8.128;HRun=10;HaplotypeScore=80.7827;InbreedingCoeff=0.7914;MQ=69.41;MQ0=0;MQRankSum=-7.849;QD=24.29;ReadPosRankSum=5.002;VQSLOD=4.7016;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:12,12:24:14.55:351,15,0	0/1:4,6:10:0.58:200,0,1	0/0:22,0:21:29.88:0,30,245	0/0:15,0:15:15.98:0,16,151	1/1:5,25:32:65.83:668,66,0	1/1:2,16:18:42.11:448,42,0	1/1:2,16:18:51.13:543,51,0	0/0:4,0:26:39.63:0,40,114	1/1:2,19:21:51.13:544,51,0	1/1:8,13:21:1.72:409,2,0	1/1:6,18:24:51.13:544,51,0	1/1:4,10:14:8.44:295,8,0	1/1:4,11:15:36.09:383,36,0	1/1:6,15:21:54.09:550,54,0	1/1:1,21:22:66.16:697,66,0	1/1:4,9:13:30.08:320,30,0	1/1:8,8:17:33.07:344,33,0	1/1:1,12:13:36.09:384,36,0	1/1:7,12:19:42.03:427,42,0	1/1:1,22:24:68.97:705,69,0	1/1:2,7:10:27.01:268,27,0	1/1:3,8:12:33.04:333,33,0	1/1:5,18:23:7.85:494,8,0	1/1:3,8:11:18.05:192,18,0	1/1:4,23:28:72.01:750,72,0	1/1:3,11:15:14.97:342,15,0	1/1:1,16:17:51.13:543,51,0	1/1:0,9:9:21.52:225,22,0
chr10	25046515	.	G	GAAGA	1607.44	PASS	AB=1.000;AC=4;AF=0.071;AN=56;BaseQRankSum=-1.937;DP=517;FS=10.263;HRun=0;HaplotypeScore=124.6338;InbreedingCoeff=0.3901;MQ=61.25;MQ0=3;MQRankSum=-1.292;QD=23.30;ReadPosRankSum=-5.618;VQSLOD=1.3207;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:44.29:0,44,733	0/0:4,0:4:5.36:0,5,144	0/0:28,0:21:11.55:0,12,526	0/0:28,0:16:10.55:0,11,324	0/0:26,0:26:64.54:0,65,927	0/0:18,0:18:5.07:0,5,565	0/0:13,0:12:30.09:0,30,472	1/1:11,31:42:93.23:1692,93,0	0/0:17,0:17:22.82:0,23,544	0/0:17,0:16:22.91:0,23,639	0/0:20,0:20:53.38:0,53,834	0/0:16,0:16:42.13:0,42,661	0/0:20,0:20:51.11:0,51,772	0/1:16,0:16:9.65:10,0,519	0/0:13,0:13:33.10:0,33,550	0/0:9,0:9:15.05:0,15,260	0/0:22,0:22:55.01:0,55,858	0/0:21,0:21:30.13:0,30,660	0/0:23,0:23:57.14:0,57,855	0/0:16,0:16:33.09:0,33,515	0/0:17,0:17:39.09:0,39,624	0/0:17,0:17:45.13:0,45,714	0/0:20,0:20:37.86:0,38,630	0/0:12,0:12:22.17:0,22,412	0/0:22,0:22:45.11:0,45,723	0/0:12,0:12:30.10:0,30,524	0/0:15,0:15:21.37:0,21,556	0/1:8,0:8:16.89:17,0,178
chr10	25048873	.	TGTG	T	19853.73	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=16.896;DP=689;FS=4.449;HRun=0;HaplotypeScore=130.1678;InbreedingCoeff=0.9993;MQ=78.18;MQ0=0;MQRankSum=-9.297;QD=45.02;ReadPosRankSum=6.210;VQSLOD=6.5664;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,34:34:93.32:1571,93,0	1/1:0,16:16:45.15:767,45,0	0/0:27,0:27:59.30:0,59,1488	0/0:33,0:33:90.17:0,90,1785	1/1:1,39:40:96.33:1607,96,0	1/1:0,23:23:66.23:1125,66,0	1/1:0,25:25:66.23:1125,66,0	0/0:43,0:43:99:0,126,2693	1/1:1,15:16:39.13:665,39,0	1/1:0,30:30:90.26:1448,90,0	1/1:1,22:23:60.21:1023,60,0	1/1:1,23:24:66.23:1125,66,0	1/1:0,23:23:66.23:1112,66,0	1/1:0,17:17:42.14:716,42,0	0/0:25,0:25:72.25:0,72,1640	1/1:0,29:29:84.29:1432,84,0	0/0:31,0:31:90.31:0,90,2047	0/0:13,0:13:39.13:0,39,895	0/0:18,0:18:48.16:0,48,1040	0/0:35,0:35:99:0,99,2236	0/0:23,0:23:63.22:0,63,1392	1/1:0,28:28:72.25:1227,72,0	1/1:0,18:18:45.15:767,45,0	1/1:0,12:12:21.07:358,21,0	1/1:2,22:24:57.20:972,57,0	1/1:0,21:21:63.19:1036,63,0	1/1:0,28:28:75.26:1265,75,0	1/1:0,10:10:30.10:512,30,0
chr10	25050219	.	G	GA	14535.17	PASS	AB=0.600;AC=51;AF=0.911;AN=56;BaseQRankSum=-5.274;DP=650;FS=3.470;HRun=8;HaplotypeScore=75.1361;InbreedingCoeff=0.7739;MQ=85.81;MQ0=1;MQRankSum=-8.574;QD=23.87;ReadPosRankSum=4.452;VQSLOD=5.5742;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,0:22:39.88:207,40,0	1/1:1,5:6:12.04:138,12,0	0/0:23,0:23:44.94:0,45,395	0/0:18,0:18:32.57:0,33,268	1/1:2,27:30:81.07:915,81,0	1/1:3,31:34:93.11:1050,93,0	0/1:6,12:18:12.76:373,0,13	1/1:6,30:36:87.25:993,87,0	1/1:0,19:19:54.16:623,54,0	1/1:3,18:21:54.16:623,54,0	1/1:4,17:21:48.10:539,48,0	1/1:0,21:21:63.19:727,63,0	1/1:6,26:32:78.23:900,78,0	1/1:6,20:26:29.71:595,30,0	1/1:5,1:25:47.95:239,48,0	1/1:3,22:25:62.74:727,63,0	1/1:2,0:10:19.92:101,20,0	1/1:5,0:20:48.29:245,48,0	1/1:3,1:26:68.80:387,69,0	1/1:3,2:31:74.03:396,74,0	1/1:1,0:18:42.71:220,43,0	1/1:4,25:29:78.22:885,78,0	1/1:5,22:27:56.72:657,57,0	1/1:0,19:19:57.17:658,57,0	1/1:4,24:28:63.19:727,63,0	1/1:4,22:26:66.20:762,66,0	1/1:9,19:29:57:638,57,0	1/1:2,6:8:18.05:208,18,0
chr10	25052389	.	GAAAAT	G	5384.38	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-11.577;DP=477;FS=8.013;HRun=0;HaplotypeScore=115.2280;InbreedingCoeff=0.9941;MQ=69.64;MQ0=0;MQRankSum=-2.373;QD=48.51;ReadPosRankSum=1.659;VQSLOD=4.7053;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:42.14:0,42,1026	0/0:8,0:8:21.07:0,21,495	0/0:13,0:13:27.09:0,27,800	0/0:8,0:8:15.52:0,16,353	0/0:33,0:33:87.30:0,87,2132	0/0:12,0:12:36.12:0,36,889	0/0:10,0:10:30.10:0,30,711	0/0:29,0:29:78.27:0,78,1821	0/0:13,0:13:36.12:0,36,897	0/0:23,0:23:54.18:0,54,1225	0/0:20,0:20:57.20:0,57,1369	0/0:15,0:15:45.15:0,45,1110	0/0:24,0:24:69.24:0,69,1690	0/0:16,0:16:48.16:0,48,1183	1/1:2,22:24:60.21:1205,60,0	0/0:19,0:18:57.20:0,57,1416	1/1:2,16:18:39.13:791,39,0	1/1:0,15:15:42.14:852,42,0	1/1:0,18:18:54.14:982,54,0	1/1:3,23:26:57.13:1067,57,0	1/1:1,9:10:24.08:487,24,0	0/0:8,0:8:24.08:0,24,601	0/0:21,0:21:48.16:0,48,1162	0/0:10,0:10:27.09:0,27,665	0/0:16,0:16:48.16:0,48,1158	0/0:23,0:23:63.22:0,63,1504	0/0:23,0:23:66.23:0,66,1637	0/0:7,0:7:21.07:0,21,541
chr10	25052443	.	TTCAATGTGTCCTA	T	1485.89	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.858;DP=511;FS=3.496;HRun=0;HaplotypeScore=210.7200;InbreedingCoeff=0.8186;MQ=73.49;MQ0=0;MQRankSum=-2.533;QD=67.54;ReadPosRankSum=-2.351;VQSLOD=3.2407;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:54.18:0,54,3277	0/0:4,0:4:12.04:0,12,804	0/0:12,0:12:33.11:0,33,1818	0/0:9,0:9:24.08:0,24,1145	0/0:36,0:36:99:0,108,6815	0/0:14,0:14:42.11:0,42,2378	0/0:14,0:14:39.13:0,39,2260	1/1:6,16:22:48.14:1581,48,0	0/0:18,0:18:54.19:0,54,3202	0/0:29,0:29:81.27:0,81,5093	0/0:13,0:13:39.13:0,39,2612	0/0:16,0:16:48.16:0,48,3134	0/0:27,0:27:81.28:0,81,5009	0/0:18,0:18:54.19:0,54,3503	0/0:24,0:24:66.23:0,66,4130	0/0:18,0:17:54.19:0,54,3299	0/0:21,0:21:57.19:0,57,3319	0/0:16,0:16:48.16:0,48,3153	0/0:29,0:29:84.28:0,84,4572	0/0:30,0:30:87.30:0,87,5169	0/0:7,0:7:18.06:0,18,1035	0/0:15,0:15:45.15:0,45,2822	0/0:24,0:24:72.20:0,72,4185	0/0:7,0:7:21.07:0,21,1195	0/0:20,0:20:60.21:0,60,3841	0/0:19,0:19:51.17:0,51,2936	0/0:26,0:26:78.27:0,78,4930	0/0:3,0:3:3.01:0,3,201
chr10	25054612	.	AT	A	240.80	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.610;DP=534;FS=0.000;HRun=7;HaplotypeScore=52.5124;InbreedingCoeff=0.8764;MQ=66.01;MQ0=0;MQRankSum=0.364;QD=18.52;ReadPosRankSum=-0.485;VQSLOD=2.9720;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,12:13:33.07:335,33,0	0/0:6,0:6:18.06:0,18,226	0/0:7,0:7:5.56:0,6,167	0/0:7,0:7:18.06:0,18,224	0/0:41,0:41:99:0,114,1419	0/0:21,0:21:60.18:0,60,741	0/0:12,0:12:27.09:0,27,339	0/0:29,0:29:78.24:0,78,966	0/0:15,0:15:42.12:0,42,516	0/0:13,0:13:39.12:0,39,489	0/0:23,0:23:63.19:0,63,779	0/0:13,0:13:36.11:0,36,450	0/0:23,0:23:66.21:0,66,829	0/0:22,0:22:57.18:0,57,717	0/0:21,0:21:60.19:0,60,755	0/0:22,0:22:66.19:0,66,805	0/0:28,0:28:75.21:0,75,925	0/0:14,0:14:36.11:0,36,448	0/0:23,0:23:69.19:0,69,848	0/0:25,0:25:72.22:0,72,895	0/0:7,0:7:18.04:0,18,212	0/0:18,0:18:48.13:0,48,579	0/0:26,0:26:75.24:0,75,941	0/0:16,0:16:44.17:0,44,533	0/0:23,0:23:63.19:0,63,780	0/0:19,0:19:54.16:0,54,665	0/0:35,0:35:96.30:0,96,1194	0/0:12,0:12:27.03:0,27,321
chr10	25055443	.	TAGAA	T	11942.07	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=8.433;DP=510;FS=2.247;HRun=0;HaplotypeScore=151.2351;InbreedingCoeff=0.9650;MQ=69.15;MQ0=1;MQRankSum=-2.921;QD=37.20;ReadPosRankSum=5.763;VQSLOD=5.1569;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,16:18:23.35:439,23,0	1/1:4,10:14:30.09:532,30,0	0/0:28,0:22:50.97:0,51,1177	0/0:18,0:16:34.48:0,34,667	1/1:2,17:19:39.13:722,39,0	1/1:1,25:26:48.16:891,48,0	1/1:2,10:12:21.07:397,21,0	0/0:26,0:25:69.24:0,69,1813	1/1:1,12:13:36.11:646,36,0	1/1:0,17:17:51.06:858,51,0	1/1:0,15:15:21.07:384,21,0	1/1:1,18:19:36.12:673,36,0	1/1:3,20:23:42.14:791,42,0	1/1:1,17:18:42.14:797,42,0	0/0:34,0:34:92.77:0,93,1669	1/1:1,16:17:42.14:794,42,0	0/0:18,0:18:48.11:0,48,1177	0/0:15,0:15:15.08:0,15,879	0/0:11,0:11:30.07:0,30,680	0/0:28,0:28:80.99:0,81,1651	0/0:9,0:9:21.46:0,21,446	1/1:2,9:11:24.05:406,24,0	1/1:0,13:13:23.98:445,24,0	1/1:2,7:9:3.01:57,3,0	1/1:1,24:25:57.20:1062,57,0	1/1:3,16:19:48.15:875,48,0	1/1:1,25:26:48.16:888,48,0	1/1:0,7:7:15.05:284,15,0
chr10	25055472	.	A	AGT	451.69	PASS	AB=0.939;AC=10;AF=0.179;AN=56;BaseQRankSum=5.901;DP=486;FS=26.042;HRun=0;HaplotypeScore=183.5649;InbreedingCoeff=-0.2394;MQ=54.33;MQ0=11;MQRankSum=-3.708;QD=2.40;ReadPosRankSum=-2.050;VQSLOD=0.7132;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:1.71:0,2,336	0/0:13,0:13:5.72:0,6,414	0/0:28,0:8:24.08:0,24,353	0/0:18,0:9:15.07:0,15,118	0/0:13,0:13:24.06:0,24,352	0/0:22,0:22:47.05:0,47,510	0/0:8,1:8:16.96:0,17,234	0/0:27,0:26:73.48:0,73,1153	0/1:9,5:14:51.99:52,0,359	0/0:14,0:14:13.17:0,13,344	0/1:21,0:21:58.40:58,0,195	0/1:15,2:17:39.72:40,0,355	0/1:12,1:13:64.59:65,0,375	0/0:16,0:16:5.20:0,5,596	0/0:28,0:28:61.54:0,62,672	0/1:17,0:17:15.71:16,0,367	0/0:23,0:22:22.33:0,22,395	0/0:13,0:13:29.74:0,30,401	0/0:20,0:17:16:0,16,502	0/0:17,0:17:37.75:0,38,471	0/0:7,0:7:9.03:0,9,147	0/1:18,0:18:11.05:11,0,178	0/1:21,0:21:1.41:1,0,302	0/0:6,0:6:5.70:0,6,97	0/1:21,2:23:99:116,0,581	0/1:18,1:19:91.76:92,0,621	0/1:24,1:25:99:138,0,548	0/0:6,0:5:15.05:0,15,244
chr10	25055489	.	TAGATAGATAGATAGATAGAC	T	3588.61	PASS	AB=0.982;AC=21;AF=0.375;AN=56;BaseQRankSum=-4.019;DP=520;FS=4.403;HRun=0;HaplotypeScore=316.3051;InbreedingCoeff=-0.3833;MQ=46.84;MQ0=12;MQRankSum=4.568;QD=10.00;ReadPosRankSum=-6.831;VQSLOD=0.5841;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:19,1:21:45.02:287,0,45	1/1:8,0:8:9.03:235,9,0	0/0:17,0:5:5.50:0,5,68	0/0:13,0:4:6.48:0,6,74	0/1:18,0:18:72.20:72,0,187	0/1:24,0:24:44.68:45,0,559	0/1:12,0:11:56.93:57,0,144	0/1:35,0:34:99:203,0,641	0/1:16,0:16:60.97:69,0,61	0/1:16,0:16:73.82:74,0,165	0/0:20,0:20:15.88:0,16,157	0/1:16,0:16:90.05:147,0,90	0/1:19,0:19:99:283,0,134	0/1:15,0:15:48.36:67,0,48	0/0:31,0:31:37.61:0,38,351	0/1:12,5:17:63.07:936,0,63	0/0:20,0:19:7.12:0,7,192	0/1:14,0:14:60.12:60,0,280	0/1:17,0:13:60.65:61,0,208	0/0:17,0:17:20.39:0,20,192	0/0:9,0:9:7.66:0,8,268	0/1:20,0:20:10.12:60,0,10	0/0:26,0:26:10.91:0,11,82	0/0:8,0:8:0.98:0,1,87	0/1:28,0:28:99:135,0,293	0/1:23,0:23:67.75:374,0,68	0/1:35,0:34:99:379,0,336	1/1:5,0:5:5.99:48,6,0
chr10	25055493	.	TAGATAGATAGATAGAC	T	9671.70	PASS	AB=1.000;AC=40;AF=0.714;AN=56;BaseQRankSum=-0.727;DP=517;FS=0.643;HRun=0;HaplotypeScore=261.3097;InbreedingCoeff=0.1901;MQ=49.96;MQ0=10;MQRankSum=-0.057;QD=21.03;ReadPosRankSum=-0.154;VQSLOD=3.3285;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:21,0:22:48.53:161,0,49	1/1:7,0:7:8.92:104,9,0	0/0:17,0:8:14.26:0,14,156	0/0:11,0:4:4.72:0,5,50	0/1:17,0:17:63.61:117,0,64	0/1:23,0:23:99:227,0,99	1/1:12,0:11:11.96:95,12,0	0/1:37,0:36:99:302,0,173	1/1:15,0:15:24.04:429,24,0	1/1:19,0:19:31.12:505,31,0	1/1:9,11:20:24.04:423,24,0	1/1:15,2:17:30.05:583,30,0	1/1:17,2:19:47.94:755,48,0	1/1:14,2:16:30.01:370,30,0	1/1:31,0:31:15.40:329,15,0	0/1:16,0:16:26.49:592,0,26	0/0:18,0:18:8.05:0,8,91	0/1:14,0:14:81.07:81,0,105	0/1:17,0:13:31.25:277,0,31	1/1:16,0:16:16.85:180,17,0	0/0:11,0:11:5.15:0,5,117	1/1:0,18:18:9.03:260,9,0	1/1:7,18:25:15.98:255,16,0	0/1:9,0:9:61.20:68,0,61	1/1:24,4:28:42.01:949,42,0	1/1:19,3:22:49.28:1104,49,0	1/1:30,5:34:71.92:1456,72,0	1/1:5,0:5:5.99:48,6,0
chr10	25055497	.	TAGATAGATAGAC	T	9915.56	PASS	AB=0.970;AC=46;AF=0.821;AN=56;BaseQRankSum=0.636;DP=510;FS=7.407;HRun=0;HaplotypeScore=227.1360;InbreedingCoeff=0.3796;MQ=50.71;MQ0=8;MQRankSum=-0.401;QD=21.01;ReadPosRankSum=1.751;VQSLOD=2.9510;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:22:21.63:147,0,22	1/1:7,0:7:8.87:58,9,0	0/0:16,0:10:23.14:0,23,248	0/0:9,0:4:4.72:0,5,50	1/1:14,3:17:32.93:265,33,0	1/1:15,7:22:54.05:989,54,0	1/1:13,0:12:11.99:100,12,0	1/1:36,0:35:59.06:463,59,0	1/1:14,0:14:26.56:232,27,0	1/1:11,8:19:48.11:1085,48,0	1/1:18,0:18:20.73:238,21,0	1/1:16,0:16:29.61:327,30,0	1/1:19,0:19:44.71:517,45,0	1/1:16,0:16:29.98:254,30,0	1/1:7,23:30:33.11:1098,33,0	1/1:16,0:16:28.62:471,29,0	0/1:17,0:18:6.92:16,0,7	0/1:13,1:14:48.20:171,0,48	1/1:6,12:14:39:571,39,0	1/1:2,15:17:18.06:600,18,0	0/0:13,0:13:2.09:0,2,36	1/1:18,0:18:8.95:133,9,0	1/1:24,0:24:11.53:64,12,0	0/1:8,0:8:19.65:20,0,42	1/1:28,0:28:41.68:494,42,0	1/1:21,0:21:50.61:665,51,0	1/1:38,0:37:74.76:889,75,0	1/1:3,0:3:5.99:48,6,0
chr10	25055501	.	TAGATAGAC	T	7354.27	PASS	AB=0.851;AC=49;AF=0.875;AN=56;BaseQRankSum=-1.435;DP=493;FS=0.000;HRun=0;HaplotypeScore=200.6154;InbreedingCoeff=0.4384;MQ=51.53;MQ0=6;MQRankSum=0.131;QD=15.58;ReadPosRankSum=3.160;VQSLOD=3.4224;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:21:11.64:160,12,0	1/1:7,0:7:8.88:60,9,0	0/0:14,0:12:29.14:0,29,305	0/0:7,0:4:7.73:0,8,87	1/1:16,0:16:32.93:265,33,0	1/1:24,0:24:59.95:627,60,0	1/1:13,0:12:17.20:132,17,0	1/1:31,0:30:64.58:477,65,0	1/1:13,0:13:12.96:143,13,0	1/1:21,0:21:54.10:770,54,0	1/1:18,0:18:18.96:156,19,0	1/1:16,0:16:27.02:233,27,0	1/1:19,0:19:32.50:401,32,0	1/1:15,0:15:32.84:260,33,0	1/1:27,0:27:33.04:605,33,0	1/1:15,0:15:32.79:386,33,0	0/1:3,13:16:1.84:154,0,2	0/1:15,0:15:25.28:180,0,25	1/1:16,0:14:38.99:408,39,0	1/1:17,0:17:18.06:325,18,0	1/1:3,11:14:3.40:18,3,0	1/1:18,0:18:8.88:96,9,0	0/1:23,0:23:1.34:30,0,1	1/1:8,0:8:3.81:27,4,0	1/1:27,0:27:29.81:324,30,0	1/1:20,0:20:13.30:417,13,0	1/1:37,0:36:61.15:655,61,0	1/1:5,0:3:5.99:48,6,0
chr10	25056624	.	T	TAAA	12763.66	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-7.507;DP=552;FS=13.035;HRun=9;HaplotypeScore=82.4017;InbreedingCoeff=0.9905;MQ=78.84;MQ0=0;MQRankSum=-2.327;QD=33.95;ReadPosRankSum=0.620;VQSLOD=2.6401;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,0:15:23.91:184,24,0	1/1:2,9:11:21.07:409,21,0	0/0:17,0:17:33.02:0,33,387	0/0:14,0:14:18.25:0,18,264	1/1:4,28:36:92.03:1451,92,0	1/1:4,14:18:17.23:515,17,0	1/1:4,9:17:36.04:582,36,0	0/0:3,0:25:57.82:0,58,358	1/1:4,12:16:27.09:533,27,0	1/1:15,15:32:77.42:1241,77,0	1/1:3,10:15:36.06:625,36,0	1/1:3,9:12:24.08:468,24,0	1/1:3,17:21:42.06:807,42,0	1/1:7,10:18:30.06:532,30,0	0/0:28,0:28:78.22:0,78,983	1/1:5,13:20:30.08:556,30,0	0/0:16,0:16:39.11:0,39,492	0/0:14,0:14:39.12:0,39,492	0/0:16,0:16:39.11:0,39,481	0/0:31,0:31:81.21:0,81,997	0/0:15,0:15:45.14:0,45,569	1/1:4,18:22:51:785,51,0	1/1:4,14:20:36.59:699,37,0	1/1:0,9:9:27.05:493,27,0	1/1:5,12:19:30.04:511,30,0	1/1:8,17:29:63.15:1073,63,0	1/1:8,23:35:62.17:1079,62,0	1/1:2,6:10:12.04:221,12,0
chr10	25059029	.	A	AT	12924.15	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-13.675;DP=552;FS=18.468;HRun=8;HaplotypeScore=51.9396;InbreedingCoeff=0.9966;MQ=72.11;MQ0=0;MQRankSum=-1.160;QD=30.20;ReadPosRankSum=0.098;VQSLOD=3.1669;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,21:23:57.17:658,57,0	1/1:0,8:8:24.07:277,24,0	0/0:8,0:8:18.01:0,18,165	0/0:7,0:7:18.82:0,19,151	1/1:1,16:17:51.15:587,51,0	1/1:0,28:28:84.25:969,84,0	1/1:1,17:18:48.14:554,48,0	1/1:5,27:32:81.19:895,81,0	1/1:0,18:18:54.16:623,54,0	1/1:2,21:23:63.19:727,63,0	1/1:1,20:21:54.12:608,54,0	1/1:1,22:23:54.16:623,54,0	1/1:2,24:27:75.22:858,75,0	1/1:1,17:18:45.13:519,45,0	0/0:20,0:20:57.02:0,57,517	1/1:2,23:25:69.21:796,69,0	0/0:21,0:21:51.02:0,51,467	0/0:14,0:14:36.02:0,36,329	0/0:10,0:11:26.05:0,26,226	0/0:30,0:30:87.05:0,87,796	0/0:13,0:13:35.83:0,36,318	1/1:1,16:17:48.14:554,48,0	1/1:1,12:13:29.90:346,30,0	1/1:3,20:23:57.17:658,57,0	1/1:3,18:21:29.70:596,30,0	1/1:5,31:36:90.26:1030,90,0	1/1:1,24:25:63.18:719,63,0	1/1:2,10:12:30.06:325,30,0
chr10	25059763	.	T	TC	17696.93	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=3.198;DP=673;FS=2.193;HRun=1;HaplotypeScore=211.5011;InbreedingCoeff=0.9971;MQ=66.74;MQ0=0;MQRankSum=-5.811;QD=41.06;ReadPosRankSum=3.214;VQSLOD=4.3175;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:34:66.65:0,67,923	1/1:0,8:8:24.08:359,24,0	0/0:24,0:24:60.13:0,60,749	0/0:19,0:18:44.89:0,45,525	1/1:5,23:28:72.24:1075,72,0	1/1:0,33:33:93.32:1392,93,0	1/1:3,20:23:60.63:873,61,0	0/0:40,0:40:99:0,117,1514	1/1:1,22:24:69.19:996,69,0	1/1:6,27:33:93.28:1350,93,0	1/1:1,21:22:60.08:895,60,0	1/1:2,19:21:55.23:830,55,0	1/1:3,33:36:99:1480,99,0	1/1:0,32:32:93.32:1391,93,0	0/0:27,0:27:66.21:0,66,856	1/1:0,14:14:42.07:581,42,0	0/0:19,0:19:45.10:0,45,564	0/0:14,0:14:33.11:0,33,428	0/0:19,0:19:57.19:0,57,740	0/0:37,0:37:99:0,102,1321	0/0:8,0:8:15.05:0,15,195	1/1:3,20:23:66.14:938,66,0	1/1:3,27:30:84.74:1237,85,0	1/1:5,11:16:39.51:515,40,0	1/1:1,26:27:78.26:1168,78,0	1/1:2,26:28:81.27:1195,81,0	1/1:1,23:24:69.23:1016,69,0	1/1:0,9:9:27.09:405,27,0
chr10	25059790	.	C	CTTTTCTTTCTT	40655.44	PASS	AB=0.738;AC=44;AF=0.786;AN=56;BaseQRankSum=3.134;DP=646;FS=15.949;HRun=0;HaplotypeScore=216.6076;InbreedingCoeff=0.1462;MQ=47.83;MQ0=6;MQRankSum=-2.369;QD=66.43;ReadPosRankSum=3.143;VQSLOD=3.0964;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:12,0:33:80.44:2051,0,80	1/1:5,8:14:32.62:1000,33,0	0/0:18,0:11:20.65:0,21,420	0/0:16,0:13:16.44:0,16,457	1/1:10,15:31:51.85:1813,52,0	1/1:14,13:28:74.64:2584,75,0	1/1:12,8:21:59.60:1851,60,0	0/1:27,0:42:99:1066,0,301	1/1:4,9:14:41.97:1773,42,0	1/1:15,14:30:81.75:2641,82,0	1/1:5,12:21:44.90:1771,45,0	1/1:5,15:23:44.98:2199,45,0	1/1:17,11:28:71.75:2303,72,0	1/1:19,11:34:83.49:2427,83,0	0/1:10,0:22:99:1111,0,117	1/1:4,7:12:23.95:1035,24,0	0/1:9,0:23:43.66:1152,0,44	0/1:10,0:10:42.78:412,0,43	0/1:14,0:23:95.69:896,0,96	0/1:14,0:25:99:1390,0,175	0/1:8,0:8:61.70:246,0,62	1/1:10,10:23:44.71:1483,45,0	1/1:11,12:26:51.20:1805,51,0	1/1:3,12:18:30.02:1514,30,0	1/1:12,14:30:47.73:1629,48,0	1/1:12,14:28:68.63:2439,69,0	1/1:5,12:20:32.94:1248,33,0	1/1:13,3:16:26.98:816,27,0
chr10	25059798	.	T	TC	2883.66	PASS	AB=0.977;AC=24;AF=0.429;AN=56;BaseQRankSum=13.162;DP=643;FS=14.021;HRun=0;HaplotypeScore=238.8585;InbreedingCoeff=-0.0577;MQ=42.40;MQ0=8;MQRankSum=-7.031;QD=6.64;ReadPosRankSum=6.449;VQSLOD=1.7642;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:34:65.65:0,66,375	0/1:16,0:16:68.52:69,0,110	0/0:16,0:9:20.65:0,21,233	0/1:13,0:10:22.62:23,0,211	0/1:31,0:31:99:121,0,151	0/1:25,1:26:4.52:293,0,5	0/1:22,1:22:52.76:201,0,53	0/0:42,0:39:99:0,110,1059	1/1:16,0:16:6.21:137,6,0	1/1:33,0:32:3.15:298,3,0	0/1:23,1:23:21.85:165,0,22	1/1:22,0:22:13.73:121,14,0	0/1:29,1:29:99:230,0,213	0/1:33,0:33:99:216,0,198	0/0:21,0:21:54.33:0,54,368	0/1:15,0:15:57.30:57,0,104	0/0:21,0:20:36.96:0,37,254	0/0:12,0:11:14.62:0,15,93	0/0:25,0:25:65.23:0,65,611	0/0:28,0:26:70.07:0,70,492	0/0:9,0:9:17.82:0,18,122	0/1:24,0:24:36.92:176,0,37	0/1:23,1:24:20.70:190,0,21	0/1:18,0:18:9.16:84,0,9	1/1:26,0:26:23.65:183,24,0	0/1:26,0:26:88.76:225,0,89	1/1:20,0:20:5.55:119,6,0	0/1:12,2:14:99:154,0,169
chr10	25060473	.	C	CT	23127.17	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-1.158;DP=662;FS=4.171;HRun=3;HaplotypeScore=92.5490;InbreedingCoeff=0.9988;MQ=81.55;MQ0=0;MQRankSum=-10.198;QD=37.36;ReadPosRankSum=5.761;VQSLOD=4.6559;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,31:32:84.25:1155,84,0	1/1:1,8:9:27.09:368,27,0	0/0:23,0:23:57.12:0,57,664	0/0:20,0:20:54.14:0,54,620	1/1:0,25:25:75.17:989,75,0	1/1:0,26:26:78.26:1071,78,0	1/1:2,17:19:45.15:617,45,0	1/1:2,24:26:66.22:923,66,0	1/1:1,14:15:39.13:535,39,0	1/1:0,25:25:75.25:1028,75,0	1/1:3,28:31:78.21:1050,78,0	1/1:1,15:16:42.14:577,42,0	1/1:2,33:35:93.31:1274,93,0	1/1:0,21:21:63.21:861,63,0	1/1:0,25:25:72.24:1008,72,0	1/1:0,20:20:60.20:824,60,0	1/1:2,20:22:57.19:798,57,0	1/1:1,19:20:54.17:739,54,0	1/1:3,13:16:36.09:456,36,0	1/1:3,47:50:99:1848,132,0	1/1:0,22:22:60.20:840,60,0	1/1:2,20:22:57.15:755,57,0	1/1:0,26:26:75.25:1026,75,0	1/1:0,15:15:45.15:617,45,0	1/1:3,25:27:75.25:1032,75,0	1/1:0,33:33:99:1310,99,0	1/1:0,28:28:77.84:1055,78,0	1/1:0,11:11:27.09:370,27,0
chr10	25061016	.	G	GGA	9693.95	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-11.947;DP=724;FS=6.448;HRun=0;HaplotypeScore=94.2294;InbreedingCoeff=0.9947;MQ=71.30;MQ0=1;MQRankSum=1.647;QD=36.86;ReadPosRankSum=3.049;VQSLOD=6.9168;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,44:50:99:1849,105,0	0/0:17,0:17:51.08:0,51,678	0/0:26,0:24:57.84:0,58,671	0/0:21,0:18:38.54:0,39,486	0/0:24,0:24:72.13:0,72,948	0/0:22,0:22:63.20:0,63,938	0/0:32,0:32:93.29:0,93,1370	1/1:2,31:32:87.15:1256,87,0	0/0:24,0:24:72.24:0,72,1086	0/0:32,0:32:87.19:0,87,1113	0/0:13,0:13:30.07:0,30,398	0/0:34,0:34:93.30:0,93,1389	0/0:30,0:30:87.25:0,87,1261	0/0:27,0:26:75.24:0,75,1104	1/1:1,31:32:63.21:1111,63,0	0/0:28,0:28:81.26:0,81,1208	1/1:1,34:36:81.27:1428,81,0	1/1:1,14:15:36.06:598,36,0	1/1:0,16:18:51.05:721,51,0	1/1:1,21:22:57.07:903,57,0	1/1:0,55:56:99:1828,105,0	0/0:24,0:24:69.17:0,69,928	0/0:16,0:16:45.13:0,45,644	0/0:29,0:29:81.23:0,81,1171	0/0:21,0:22:56.85:0,57,706	0/0:16,0:16:39.10:0,39,523	0/0:20,0:20:54.17:0,54,801	0/0:4,0:4:12.04:0,12,181
chr10	25061450	.	ATT	A	10472.61	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=12.100;DP=484;FS=2.085;HRun=7;HaplotypeScore=61.9951;InbreedingCoeff=0.9832;MQ=68.33;MQ0=1;MQRankSum=-0.906;QD=33.46;ReadPosRankSum=2.692;VQSLOD=4.8169;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:81.26:0,81,1382	1/1:1,6:7:18.06:229,18,0	0/0:5,0:5:11.30:0,11,158	0/0:9,0:9:15.36:0,15,253	1/1:2,27:29:72.22:917,72,0	1/1:2,20:22:57.18:727,57,0	1/1:1,12:13:30.10:382,30,0	0/0:26,0:26:66.23:0,66,1146	1/1:1,6:6:15.05:191,15,0	1/1:2,22:24:66.21:841,66,0	1/1:0,31:31:87.28:1104,87,0	1/1:0,12:12:30.10:382,30,0	1/1:0,14:14:33.11:421,33,0	1/1:0,13:13:39.12:497,39,0	0/0:17,0:17:48.16:0,48,836	1/1:1,4:5:12.03:153,12,0	0/0:15,0:15:45.15:0,45,787	0/0:21,0:21:60.21:0,60,1049	0/0:11,0:11:30.09:0,30,497	0/0:26,0:26:75.26:0,75,1311	0/0:14,0:14:39.13:0,39,679	1/1:0,13:13:33.06:402,33,0	1/1:1,18:19:48.15:612,48,0	1/1:0,8:8:21.07:268,21,0	1/1:1,28:29:84.22:1052,84,0	1/1:3,20:23:60.19:764,60,0	1/1:3,32:35:93.29:1185,93,0	1/1:0,9:9:27.09:344,27,0
chr10	25062341	.	A	ATT	13254.44	PASS	AC=50;AF=0.926;AN=54;BaseQRankSum=-5.622;DP=466;FS=14.265;HRun=7;HaplotypeScore=61.8625;InbreedingCoeff=0.9756;MQ=80.44;MQ0=0;MQRankSum=-6.778;QD=29.99;ReadPosRankSum=3.272;VQSLOD=3.2854;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,0:19:44.92:158,45,0	1/1:1,6:7:21.07:341,21,0	0/0:16,0:15:33.06:0,33,358	0/0:8,0:8:14.06:0,14,132	1/1:0,21:22:63.22:1033,63,0	1/1:1,18:19:48.16:788,48,0	1/1:1,10:11:27.09:443,27,0	1/1:7,0:28:52.17:215,52,0	1/1:0,15:16:47.65:747,48,0	1/1:1,24:26:75.25:1215,75,0	1/1:2,20:22:60.20:975,60,0	1/1:3,13:16:39.13:640,39,0	1/1:5,16:21:48.16:788,48,0	1/1:1,13:14:33.11:542,33,0	1/1:2,0:20:37.90:143,38,0	1/1:2,13:17:41.57:649,42,0	1/1:2,0:12:22.46:79,22,0	1/1:2,0:17:34.93:123,35,0	1/1:4,0:24:45.41:173,45,0	1/1:1,0:16:37.91:144,38,0	1/1:2,0:17:34.93:123,35,0	1/1:1,5:6:15.05:246,15,0	1/1:0,17:18:53.67:845,54,0	1/1:2,8:11:23.05:313,23,0	1/1:1,16:17:45.15:739,45,0	1/1:4,16:20:48.12:735,48,0	1/1:4,22:26:66.22:1057,66,0	./.
chr10	25064906	.	G	GC	27854.02	PASS	AB=1.000;AC=55;AF=0.982;AN=56;BaseQRankSum=-2.978;DP=631;FS=11.787;HRun=0;HaplotypeScore=127.5542;InbreedingCoeff=-0.0275;MQ=52.83;MQ0=0;MQRankSum=-2.948;QD=44.14;ReadPosRankSum=1.607;VQSLOD=2.8248;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,22:25:66.22:1052,66,0	1/1:0,12:12:36.12:574,36,0	1/1:2,1:4:0.32:49,0,0	0/1:4,0:5:28.26:88,0,28	1/1:3,33:36:99:1599,102,0	1/1:5,27:32:93.30:1452,93,0	1/1:3,22:25:72.25:1146,72,0	1/1:12,21:33:87.23:1293,87,0	1/1:2,32:33:99:1602,102,0	1/1:3,25:28:84.29:1340,84,0	1/1:2,23:25:75.24:1172,75,0	1/1:3,17:20:60.19:918,60,0	1/1:4,21:25:72.23:1099,72,0	1/1:0,19:19:57.19:909,57,0	1/1:2,23:25:75.22:1148,75,0	1/1:3,20:23:69.24:1098,69,0	1/1:2,20:22:57.19:897,57,0	1/1:1,6:7:21.07:336,21,0	1/1:2,15:17:51.14:787,51,0	1/1:0,18:18:54.18:845,54,0	1/1:2,12:14:27.09:431,27,0	1/1:1,26:27:81.28:1279,81,0	1/1:3,22:26:66.21:1018,66,0	1/1:4,19:22:60.19:918,60,0	1/1:3,30:33:96.30:1493,96,0	1/1:1,29:30:90.31:1436,90,0	1/1:5,29:34:99:1541,99,0	1/1:2,7:9:21.07:335,21,0
chr10	25066503	.	GCAGACAGACAGACAGA	G	8291.44	PASS	AB=1.000;AC=33;AF=0.589;AN=56;BaseQRankSum=3.678;DP=560;FS=4.329;HRun=0;HaplotypeScore=240.5307;InbreedingCoeff=0.7108;MQ=57.09;MQ0=9;MQRankSum=-1.770;QD=28.20;ReadPosRankSum=-0.488;VQSLOD=3.5544;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:72.22:0,72,2283	1/1:3,0:3:6.01:119,6,0	0/0:42,0:22:35.79:0,36,779	0/0:25,0:19:18.93:0,19,350	1/1:15,0:15:2.82:30,3,0	1/1:14,0:13:15:236,15,0	1/1:20,0:20:24.05:525,24,0	0/0:17,0:15:28.18:0,28,300	1/1:17,0:17:33.09:976,33,0	0/1:26,0:26:99:863,0,370	1/1:10,0:10:6.02:147,6,0	1/1:19,0:19:33.11:928,33,0	1/1:14,0:14:26.69:535,27,0	1/1:18,0:18:30.08:847,30,0	0/0:18,0:18:21.02:0,21,407	1/1:18,0:18:29.12:707,29,0	0/0:23,0:22:55.03:0,55,1975	0/0:22,0:22:6.02:0,6,175	0/0:22,0:22:48.15:0,48,1690	0/0:8,0:17:12.04:0,12,636	0/0:40,0:38:78.16:0,78,3007	0/1:22,0:22:0:0,0,0	1/1:14,0:14:2.76:42,3,0	0/1:25,0:25:83.96:153,0,84	1/1:17,1:18:18.05:519,18,0	1/1:4,16:20:44.09:868,44,0	1/1:15,0:15:27.09:666,27,0	1/1:6,0:6:6.02:130,6,0
chr10	25066508	.	CAG	C	120.53	PASS	AB=0.966;AC=12;AF=0.214;AN=56;BaseQRankSum=6.825;DP=521;FS=12.724;HRun=0;HaplotypeScore=152.3982;InbreedingCoeff=-0.0802;MQ=54.66;MQ0=11;MQRankSum=-7.168;QD=0.81;ReadPosRankSum=-1.790;VQSLOD=1.6323;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:38:72.09:0,72,1212	0/0:3,0:3:5.69:0,6,53	0/0:34,0:17:30.79:0,31,611	0/0:24,0:17:39.12:0,39,457	0/1:13,0:13:3.36:3,0,37	0/1:13,1:13:19.45:19,0,192	0/0:16,1:17:15.76:0,16,242	0/0:17,0:15:42.02:0,42,518	0/1:15,0:15:43.59:44,0,162	0/0:26,0:26:48.79:0,49,704	1/1:7,0:7:5.87:34,6,0	0/1:14,1:16:3.52:4,0,224	0/1:12,0:12:35.83:36,0,234	0/0:17,0:17:10.48:0,10,258	0/0:19,0:19:32.40:0,32,353	0/1:19,0:18:26.19:26,0,223	0/0:23,0:22:57.19:0,57,963	0/0:22,0:22:8.99:0,9,110	0/0:21,0:21:54.18:0,54,900	0/0:13,0:13:15.05:0,15,253	0/0:37,0:35:84.26:0,84,1439	0/0:20,0:20:20.90:0,21,296	0/1:14,0:14:7.99:8,0,59	0/0:22,1:23:14.90:0,15,204	0/0:16,0:16:26.42:0,26,233	0/1:19,0:19:45.78:46,0,361	0/1:13,1:14:35.34:35,0,185	0/1:5,1:6:7.97:8,0,59
chr10	25066514	.	GACAGACAGACAGACAGAC	G	9568.91	PASS	AB=0.780;AC=32;AF=0.571;AN=56;BaseQRankSum=3.707;DP=506;FS=3.363;HRun=0;HaplotypeScore=225.1930;InbreedingCoeff=0.6549;MQ=49.83;MQ0=14;MQRankSum=-1.653;QD=35.57;ReadPosRankSum=-0.996;VQSLOD=3.2974;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:39:72.22:0,72,2476	1/1:3,0:3:6.01:143,6,0	0/0:27,0:13:35.88:0,36,779	0/0:18,0:11:18.93:0,19,350	1/1:2,11:14:2.87:63,3,0	1/1:12,2:12:18.02:343,18,0	1/1:22,0:20:37.33:694,37,0	0/0:17,0:15:31.06:0,31,315	1/1:10,6:17:31.72:1198,32,0	0/1:6,22:27:99:979,0,394	1/1:6,1:7:5.81:153,6,0	1/1:11,5:16:35.69:1185,36,0	1/1:7,3:10:29.82:677,30,0	1/1:12,3:16:33.09:1026,33,0	0/0:20,0:20:27.04:0,27,573	1/1:13,2:16:33.10:881,33,0	0/0:24,0:23:57.62:0,58,2271	0/0:20,0:20:6.02:0,6,209	0/0:20,0:20:57.14:0,57,1848	0/0:13,0:13:12.04:0,12,690	0/0:38,0:35:78.17:0,78,3318	0/1:3,10:14:0:0,0,0	1/1:2,11:13:5.74:97,6,0	0/1:26,0:24:85.07:152,0,85	1/1:13,1:15:18.05:556,18,0	0/1:18,0:18:11.23:703,0,11	1/1:13,0:13:16.76:650,17,0	1/1:5,0:5:5.81:68,6,0
chr10	25066516	.	CAGACAGACAGACAG	C	7787.55	PASS	AB=0.982;AC=32;AF=0.571;AN=56;BaseQRankSum=4.273;DP=501;FS=2.054;HRun=0;HaplotypeScore=201.4084;InbreedingCoeff=0.6632;MQ=49.26;MQ0=16;MQRankSum=-0.814;QD=29.39;ReadPosRankSum=-0.031;VQSLOD=4.2057;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:39:72.22:0,72,2181	1/1:3,0:3:6.01:119,6,0	0/0:27,0:13:35.79:0,36,779	0/0:14,0:9:18.93:0,19,350	1/1:14,0:14:2.74:20,3,0	1/1:13,0:11:17.37:215,17,0	1/1:23,0:21:34.99:597,35,0	0/0:16,0:14:31.06:0,31,315	1/1:17,0:17:31.18:855,31,0	0/1:27,0:26:99:824,0,368	1/1:1,6:7:6.02:177,6,0	1/1:16,0:16:35.48:851,35,0	1/1:11,0:10:22.14:495,22,0	1/1:16,0:16:33.08:829,33,0	0/0:20,0:20:27.04:0,27,443	1/1:16,0:15:32.92:674,33,0	0/0:23,0:22:57.93:0,58,1916	0/0:20,0:20:6.02:0,6,148	0/0:22,0:22:62.98:0,63,1763	0/0:14,0:13:12.04:0,12,602	0/0:39,0:36:81.38:0,81,2897	0/1:12,0:12:0:0,0,0	0/1:12,0:13:22.19:22,0,24	0/1:27,0:24:85.86:152,0,86	1/1:15,0:15:18.05:505,18,0	1/1:18,0:18:11.63:706,12,0	1/1:12,0:12:27.40:649,27,0	1/1:4,0:4:6.01:98,6,0
chr10	25066530	.	GAC	G	1136.91	PASS	AB=0.931;AC=27;AF=0.519;AN=52;BaseQRankSum=4.495;DP=527;FS=7.968;HRun=0;HaplotypeScore=152.7844;InbreedingCoeff=0.1909;MQ=45.57;MQ0=26;MQRankSum=-4.445;QD=3.59;ReadPosRankSum=2.095;VQSLOD=2.2392;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:45:2.20:23,2,0	1/1:2,1:3:3.01:33,3,0	1/1:9,0:4:0.47:1,0,0	./.	1/1:15,0:14:2.98:32,3,0	0/1:10,2:10:12.71:78,0,13	1/1:18,9:22:17.64:251,18,0	./.	1/1:15,4:19:7.72:143,8,0	0/1:30,0:27:11.49:64,0,11	0/1:9,0:9:10.65:11,0,38	1/1:14,4:18:2.12:142,2,0	0/1:12,1:12:59.18:74,0,59	0/1:15,4:19:25.55:80,0,26	0/0:27,0:26:14.22:0,14,132	0/1:13,3:15:2.36:161,0,2	0/0:28,0:27:35.73:0,36,385	0/0:3,0:28:3:0,3,28	0/0:19,0:19:8.72:0,9,50	0/0:19,0:18:11.60:0,12,108	0/0:45,0:41:36.10:0,36,335	0/1:13,0:12:0:0,0,0	0/1:12,0:12:5.31:27,0,5	1/1:20,5:20:3.01:33,3,0	1/1:16,2:18:12.49:124,12,0	0/0:19,0:19:20.97:0,21,243	0/1:12,1:12:17.91:18,0,156	0/0:6,0:6:8.96:0,9,102
chr10	25066618	.	T	TA	14207.13	PASS	AB=0.941;AC=37;AF=0.661;AN=56;BaseQRankSum=-1.852;DP=601;FS=0.000;HRun=0;HaplotypeScore=72.1112;InbreedingCoeff=0.9241;MQ=86.77;MQ0=1;MQRankSum=-3.058;QD=41.66;ReadPosRankSum=4.020;VQSLOD=5.4272;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:78.18:0,78,1062	1/1:0,7:7:18.06:288,18,0	0/0:14,0:14:42.13:0,42,572	0/0:31,0:31:84.02:0,84,1088	1/1:0,18:18:54.18:852,54,0	1/1:1,18:19:57.19:910,57,0	1/1:0,27:27:72.24:1140,72,0	0/0:39,0:39:99:0,111,1464	1/1:0,21:21:60.20:957,60,0	1/1:0,18:18:54.15:817,54,0	1/1:0,14:14:36.03:543,36,0	1/1:1,29:31:90.26:1391,90,0	1/1:0,16:16:45.15:719,45,0	1/1:0,20:20:54.18:863,54,0	0/0:29,0:29:81.27:0,81,1130	1/1:0,19:19:54.18:862,54,0	0/0:38,0:38:99:0,111,1488	0/1:15,1:16:11.78:12,0,424	0/0:21,0:21:63.20:0,63,853	0/0:23,0:23:69.22:0,69,934	0/0:34,0:33:90.30:0,90,1243	1/1:0,16:16:45.15:718,45,0	1/1:0,18:18:45.07:688,45,0	1/1:1,17:17:39.13:622,39,0	1/1:0,17:17:48.16:766,48,0	1/1:1,19:20:57.19:910,57,0	1/1:0,13:13:36.12:575,36,0	1/1:1,12:13:36.12:575,36,0
chr10	25067000	.	GTC	G	1564.21	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.122;DP=570;FS=2.217;HRun=0;HaplotypeScore=65.9740;InbreedingCoeff=0.9376;MQ=92.98;MQ0=0;MQRankSum=-4.590;QD=37.24;ReadPosRankSum=1.160;VQSLOD=5.7418;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,42:42:99:1659,102,0	0/0:7,0:7:21.07:0,21,426	0/0:23,0:23:69.22:0,69,1288	0/0:25,0:25:65.33:0,65,1195	0/0:10,0:10:30.10:0,30,605	0/0:20,0:20:60.18:0,60,1145	0/0:23,0:23:69.15:0,69,1250	0/0:34,0:34:96.30:0,96,1781	0/0:22,0:22:66.23:0,66,1320	0/0:15,0:15:45.15:0,45,911	0/0:18,0:18:54.16:0,54,1022	0/0:20,0:20:60.18:0,60,1146	0/0:35,0:35:99:0,105,2035	0/0:24,0:24:72.25:0,72,1458	0/0:18,0:18:54.16:0,54,1023	0/0:27,0:27:81.28:0,81,1635	0/0:24,0:24:72.23:0,72,1400	0/0:14,0:14:42.14:0,42,834	0/0:23,0:23:66.18:0,66,1198	0/0:4,0:4:12.04:0,12,237	0/0:37,0:37:99:0,111,2181	0/0:4,0:4:12.04:0,12,243	0/0:10,0:10:30.10:0,30,595	0/0:15,0:15:45.15:0,45,913	0/0:18,0:18:54.19:0,54,1071	0/0:19,0:19:54.17:0,54,1031	0/0:27,0:27:81.28:0,81,1621	0/0:12,0:12:36.08:0,36,619
chr10	25067656	.	C	CT	13411.48	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-13.764;DP=554;FS=11.095;HRun=4;HaplotypeScore=51.0881;InbreedingCoeff=0.9929;MQ=71.81;MQ0=0;MQRankSum=-0.790;QD=37.15;ReadPosRankSum=4.197;VQSLOD=4.2061;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:33.09:0,33,374	1/1:0,11:11:33.11:452,33,0	0/0:9,0:9:27.01:0,27,280	0/0:9,0:9:24.02:0,24,256	1/1:0,25:25:75.21:1005,75,0	1/1:0,21:21:60.20:820,60,0	1/1:2,9:11:24.08:328,24,0	0/0:34,0:34:93.26:0,93,1054	1/1:3,13:16:42.14:574,42,0	1/1:2,32:34:99:1331,99,0	1/1:0,29:29:87.29:1189,87,0	1/1:1,8:9:24.08:328,24,0	1/1:2,27:29:78.25:1052,78,0	1/1:3,20:23:54.18:738,54,0	0/0:25,0:25:72.21:0,72,817	1/1:2,15:17:11.11:540,11,0	0/0:26,0:26:75.21:0,75,850	0/0:22,0:22:60.17:0,60,680	0/0:14,0:14:42.12:0,42,477	0/0:31,0:31:90.26:0,90,1020	0/0:9,0:9:24.05:0,24,262	1/1:0,15:15:42.14:575,42,0	1/1:2,18:20:51.17:698,51,0	1/1:1,14:15:42.14:575,42,0	1/1:3,19:22:54.18:739,54,0	1/1:2,28:30:84.24:1115,84,0	1/1:0,23:23:66.22:903,66,0	1/1:0,11:11:33.11:451,33,0
chr10	25067729	.	CATAG	C	680.82	PASS	AB=0.993;AC=14;AF=0.318;AN=44;BaseQRankSum=4.472;DP=550;FS=14.278;HRun=0;HaplotypeScore=132.3711;InbreedingCoeff=0.2106;MQ=60.53;MQ0=8;MQRankSum=-1.937;QD=3.20;ReadPosRankSum=-4.001;VQSLOD=0.4084;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:20:7.76:0,8,119	0/0:14,0:14:6.01:0,6,76	./.	./.	0/1:23,1:23:11.99:121,0,12	0/0:23,0:23:8.82:0,9,185	0/0:14,0:13:6:0,6,74	./.	0/1:17,0:18:17.45:17,0,32	1/1:25,0:25:5.60:38,6,0	1/1:22,2:24:12.04:168,12,0	0/0:15,0:14:15.37:0,15,180	0/0:23,0:24:2.76:0,3,93	1/1:21,1:22:18.06:237,18,0	0/0:25,0:24:2.50:0,2,9	1/1:21,1:20:15.04:191,15,0	./.	./.	0/1:13,0:11:10.27:20,0,10	0/0:35,0:35:7.49:0,7,28	./.	0/0:17,0:17:10.37:0,10,112	0/0:25,0:24:1.73:0,2,144	0/0:14,0:15:10.25:0,10,142	0/0:19,0:19:12.02:0,12,150	0/1:23,0:25:19.29:19,0,46	0/1:28,0:27:7.71:8,0,125	0/1:12,0:12:7.32:7,0,71
chr10	25067735	.	TAG	T	124.32	PASS	AB=0.706;AC=1;AF=0.018;AN=56;BaseQRankSum=4.858;DP=526;FS=2.803;HRun=0;HaplotypeScore=112.0880;InbreedingCoeff=-0.0221;MQ=56.83;MQ0=12;MQRankSum=-3.457;QD=10.36;ReadPosRankSum=-2.205;VQSLOD=3.1598;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,1:22:26.15:0,26,467	0/0:14,0:14:36.11:0,36,525	0/0:13,0:10:30.10:0,30,419	0/0:7,0:4:9.03:0,9,128	0/0:22,0:21:36.39:0,36,491	0/0:24,0:24:51.17:0,51,792	0/0:13,0:12:30.08:0,30,438	0/0:23,0:19:57.14:0,57,767	0/0:17,0:17:22.56:0,23,592	0/0:22,0:22:61.78:0,62,797	0/0:24,0:22:36.63:0,37,481	0/0:15,0:14:42.13:0,42,651	0/0:24,0:22:54.17:0,54,798	0/0:21,0:21:35.46:0,35,429	0/0:22,0:21:48.16:0,48,687	0/0:19,0:17:31.66:0,32,409	0/0:12,0:12:24:0,24,323	0/0:14,1:13:30.10:0,30,423	0/0:13,0:10:25.50:0,26,335	0/0:33,1:34:57.05:0,57,802	0/0:14,0:14:15.05:0,15,214	0/0:18,0:18:42.14:0,42,646	0/0:23,0:22:47.94:0,48,711	0/0:14,1:15:24.08:0,24,399	0/0:20,0:19:45.15:0,45,702	0/0:22,0:22:15.38:0,15,768	0/0:24,1:24:17.52:0,18,829	0/1:7,5:12:99:199,0,169
chr10	25067773	.	GAT	G	128.91	PASS	AB=0.875;AC=2;AF=0.037;AN=54;BaseQRankSum=0.123;DP=636;FS=2.616;HRun=0;HaplotypeScore=190.5071;InbreedingCoeff=-0.0372;MQ=53.75;MQ0=15;MQRankSum=-1.821;QD=4.77;ReadPosRankSum=-0.360;VQSLOD=2.5484;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:18.52:0,19,502	0/0:12,0:12:26.93:0,27,301	0/0:11,0:5:12.02:0,12,152	0/1:12,0:6:5.21:5,0,37	0/0:33,0:31:63.29:0,63,871	0/0:37,0:35:75.09:0,75,1086	0/0:9,0:8:15.04:0,15,226	0/0:10,0:6:18.06:0,18,260	0/0:17,0:16:35.32:0,35,470	0/0:25,0:23:63.09:0,63,785	0/0:40,0:38:77.92:0,78,915	0/0:21,0:20:52.59:0,53,765	0/0:43,0:39:87.14:0,87,1040	0/0:21,0:19:33.94:0,34,421	0/1:10,5:15:93.46:203,0,93	0/0:20,0:18:32.30:0,32,354	0/0:15,0:15:21.47:0,21,323	0/0:16,0:14:14.63:0,15,358	0/0:11,0:11:18.85:0,19,353	0/0:33,0:32:48.95:0,49,607	./.	0/0:28,0:27:61.47:0,61,773	0/0:31,0:30:69.22:0,69,1032	0/0:26,0:24:34.93:0,35,540	0/0:25,0:24:53.82:0,54,745	0/0:26,0:26:64.05:0,64,932	0/0:39,0:38:94.23:0,94,1104	0/0:22,0:22:62.31:0,62,875
chr10	25067775	.	TA	T	1075.98	PASS	AB=0.863;AC=16;AF=0.296;AN=54;BaseQRankSum=2.612;DP=630;FS=1.042;HRun=1;HaplotypeScore=171.8045;InbreedingCoeff=-0.3966;MQ=53.64;MQ0=15;MQRankSum=4.156;QD=2.59;ReadPosRankSum=2.703;VQSLOD=-0.2127;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,1:27:37.55:0,38,512	0/1:6,5:11:99:124,0,225	0/0:11,0:5:12.04:0,12,176	0/1:13,0:7:10.17:10,0,75	0/1:30,4:32:41.28:41,0,865	0/1:30,7:35:43.18:43,0,980	0/0:9,0:8:15.03:0,15,212	0/0:10,0:6:18.06:0,18,267	0/1:14,2:15:15.65:16,0,406	0/1:19,3:20:49.02:49,0,674	0/1:33,6:37:99:104,0,892	0/1:18,3:20:25.71:26,0,643	0/1:33,9:38:99:254,0,894	0/0:19,2:19:2.76:0,3,426	0/1:14,0:14:1.81:2,0,118	0/1:17,4:19:74.83:75,0,332	0/0:15,0:15:24.04:0,24,339	0/0:16,0:14:32.69:0,33,433	0/0:11,0:11:32.40:0,32,409	0/0:31,0:31:54.01:0,54,685	./.	0/1:21,7:27:99:164,0,651	0/0:31,0:30:69.09:0,69,1014	0/1:22,4:24:5.40:5,0,474	0/1:22,3:24:22.69:23,0,643	0/1:26,2:27:2.12:2,0,936	0/1:28,10:37:99:285,0,980	0/0:21,1:22:24.77:0,25,854
chr10	25067777	.	GATAGATAGATAGAGAT	G	10242.55	PASS	AB=0.998;AC=28;AF=0.519;AN=54;BaseQRankSum=-3.517;DP=630;FS=0.354;HRun=0;HaplotypeScore=283.4861;InbreedingCoeff=-0.5092;MQ=56.38;MQ0=13;MQRankSum=0.531;QD=17.54;ReadPosRankSum=-4.042;VQSLOD=2.8542;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:27:99:383,0,309	0/1:11,0:11:99:255,0,284	0/0:14,0:7:3.05:0,3,199	0/0:16,0:9:14.24:0,14,149	0/1:34,0:32:99:915,0,260	0/1:37,0:35:99:390,0,1317	0/0:8,0:7:11.91:0,12,312	1/1:8,0:6:9.03:135,9,0	0/1:17,0:16:99:160,0,499	0/1:22,0:20:88.01:612,0,88	0/1:38,0:36:99:714,0,343	0/1:21,0:20:99:237,0,669	0/1:41,0:37:99:859,0,443	0/1:22,0:20:99:332,0,370	1/1:16,0:16:21.27:304,21,0	0/1:21,0:19:99:246,0,295	0/1:15,0:15:93.77:285,0,94	0/1:16,0:14:4.89:256,0,5	1/1:8,1:11:23.14:523,23,0	1/1:19,7:29:45.15:766,45,0	./.	0/1:27,0:26:99:463,0,608	0/1:30,0:29:99:226,0,1143	0/1:26,0:24:99:179,0,563	0/1:25,0:24:99:434,0,482	0/1:27,0:27:99:640,0,522	0/1:38,0:37:99:883,0,968	0/1:22,0:22:44.65:45,0,1103
chr10	25067785	.	GATAGAGAT	G	15705.88	PASS	AB=0.998;AC=34;AF=0.630;AN=54;BaseQRankSum=-0.883;DP=659;FS=4.682;HRun=0;HaplotypeScore=205.7293;InbreedingCoeff=-0.1554;MQ=57.38;MQ0=15;MQRankSum=1.924;QD=25.96;ReadPosRankSum=6.544;VQSLOD=3.7715;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:29,1:29:99:380,0,120	0/1:13,0:13:86.65:309,0,87	0/0:20,0:11:15.08:0,15,378	0/0:18,0:10:9.36:0,9,161	1/1:33,4:34:38.90:1289,39,0	0/1:37,0:35:99:666,0,244	0/0:8,0:6:5.79:0,6,92	1/1:8,0:6:9.03:135,9,0	0/1:18,0:16:76.78:215,0,77	1/1:20,0:18:49.01:791,49,0	1/1:33,5:36:87.30:1510,87,0	0/1:21,0:20:99:434,0,185	0/1:43,0:39:34.43:1244,0,34	1/1:18,3:19:48.16:852,48,0	1/1:16,0:16:20.15:422,20,0	1/1:25,2:25:51.15:856,51,0	0/1:14,0:14:14.49:243,0,14	1/1:14,0:11:16.25:277,16,0	1/1:12,0:12:13.81:426,14,0	1/1:28,1:28:22.36:544,22,0	./.	0/1:27,0:26:99:662,0,110	0/1:33,0:32:99:729,0,189	0/1:26,0:23:99:365,0,136	0/1:35,0:34:89.77:988,0,90	0/1:27,0:25:21.55:816,0,22	0/1:38,0:37:99:1121,0,104	0/1:21,0:21:51.95:430,0,52
chr10	25067789	.	GAGAT	G	17773.16	PASS	AB=1.000;AC=49;AF=0.907;AN=54;BaseQRankSum=-0.249;DP=648;FS=29.357;HRun=0;HaplotypeScore=158.9191;InbreedingCoeff=0.8619;MQ=58.36;MQ0=15;MQRankSum=2.012;QD=29.62;ReadPosRankSum=4.543;VQSLOD=3.2108;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:29:21.01:427,21,0	1/1:14,0:14:24.06:360,24,0	0/0:20,0:11:15.08:0,15,378	0/0:20,0:11:17.54:0,18,185	1/1:38,1:36:87.26:1329,87,0	1/1:34,3:35:65.92:995,66,0	0/1:6,0:4:0:0,0,0	1/1:8,0:6:9.03:135,9,0	1/1:16,3:17:27.09:429,27,0	1/1:20,0:18:51.17:805,51,0	1/1:41,0:39:99:1506,99,0	1/1:20,0:19:9.28:456,9,0	1/1:40,2:38:91.46:1394,91,0	1/1:20,0:18:39.13:584,39,0	1/1:11,0:11:27.09:432,27,0	1/1:27,0:25:45.09:652,45,0	1/1:14,0:14:19.73:265,20,0	1/1:12,2:11:16.40:277,16,0	1/1:10,0:10:27.09:417,27,0	1/1:24,0:23:33.11:527,33,0	./.	1/1:26,1:26:57.18:893,57,0	1/1:28,4:31:66.21:1040,66,0	1/1:24,2:23:30.10:460,30,0	1/1:33,1:33:69.22:1091,69,0	1/1:23,2:23:63.21:1013,63,0	1/1:34,5:38:93.23:1473,93,0	1/1:18,3:21:54.06:813,54,0
chr10	25067842	.	GAT	G	138.64	PASS	AC=2;AF=0.038;AN=52;BaseQRankSum=1.231;DP=830;FS=14.218;HRun=0;HaplotypeScore=267.5595;InbreedingCoeff=0.9090;MQ=51.04;MQ0=28;MQRankSum=-4.313;QD=8.66;ReadPosRankSum=-0.196;VQSLOD=1.9874;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:30:22.29:0,22,401	0/0:16,0:16:33.06:0,33,510	./.	./.	0/0:58,0:55:99:0,141,2213	0/0:40,0:39:87.03:0,87,1460	0/0:16,0:13:24.08:0,24,358	1/1:11,5:5:15.05:227,15,0	0/0:38,0:34:54.18:0,54,860	0/0:36,0:32:96.31:0,96,1525	0/0:54,0:54:99:0,129,2142	0/0:34,0:33:63.20:0,63,1097	0/0:57,0:53:99:0,141,2361	0/0:28,0:27:51.12:0,51,806	0/0:28,0:28:51.16:0,51,901	0/0:38,0:37:74.53:0,75,1267	0/0:15,0:15:15.05:0,15,214	0/0:16,0:13:27.05:0,27,356	0/0:16,0:15:33.19:0,33,519	0/0:28,0:27:51.14:0,51,690	0/0:9,0:9:9.01:0,9,108	0/0:39,0:38:48.08:0,48,764	0/0:44,0:42:78.27:0,78,1366	0/0:27,0:24:37.37:0,37,614	0/0:46,0:46:99:0,99,1758	0/0:40,0:36:98.83:0,99,1607	0/0:37,0:37:91.67:0,92,1350	0/0:13,0:12:33.11:0,33,483
chr10	25067861	.	A	AGAT	6239.16	PASS	AB=0.831;AC=18;AF=0.321;AN=56;BaseQRankSum=-0.669;DP=665;FS=30.327;HRun=0;HaplotypeScore=180.7907;InbreedingCoeff=-0.4907;MQ=50.93;MQ0=18;MQRankSum=3.755;QD=12.02;ReadPosRankSum=4.411;VQSLOD=2.8555;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:21,0:20:7.69:8,0,81	0/1:9,3:12:27.88:227,0,28	0/0:7,0:4:12.04:0,12,184	0/0:3,0:2:3.01:0,3,43	0/1:35,5:37:99:534,0,244	0/1:23,8:30:99:465,0,194	0/1:17,0:14:98.74:99,0,248	0/0:33,0:19:57.19:0,57,872	0/1:18,16:30:99:283,0,170	0/1:12,13:23:99:523,0,364	0/1:38,3:41:99:423,0,939	0/1:20,9:28:19.84:20,0,690	0/1:34,3:34:99:325,0,979	0/1:18,5:23:99:391,0,148	0/0:28,0:28:51.12:0,51,808	0/1:23,7:29:82:703,0,82	0/0:12,0:12:12.49:0,12,191	0/0:15,0:13:26.96:0,27,357	0/0:13,0:11:25.77:0,26,397	0/0:21,0:20:26.12:0,26,391	0/0:9,0:8:15.05:0,15,229	0/1:23,0:25:34.49:34,0,368	0/1:24,17:39:99:143,0,689	0/1:19,2:18:99:195,0,129	0/1:22,16:38:99:398,0,846	0/1:23,9:29:99:1019,0,165	0/1:18,4:22:99:449,0,278	0/0:5,0:4:9.03:0,9,142
chr10	25067880	.	A	AGAG	1192.57	PASS	AB=0.911;AC=10;AF=0.185;AN=54;BaseQRankSum=6.106;DP=576;FS=7.419;HRun=0;HaplotypeScore=179.7064;InbreedingCoeff=0.0203;MQ=53.17;MQ0=12;MQRankSum=3.335;QD=6.59;ReadPosRankSum=-1.276;VQSLOD=2.2133;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:18,0:17:1.94:2,0,51	1/1:4,2:6:9.76:100,10,0	0/0:14,0:7:15.04:0,15,232	0/0:9,0:5:4.69:0,5,95	0/1:23,7:28:11.37:474,0,11	0/1:22,5:26:37.65:279,0,38	0/0:9,0:7:14.87:0,15,103	0/0:45,0:29:60.27:0,60,530	0/1:19,7:23:35.71:268,0,36	0/0:18,0:18:31.83:0,32,266	0/0:34,0:34:61.22:0,61,525	0/0:24,0:23:40.09:0,40,338	0/0:34,0:30:69.86:0,70,599	0/0:17,0:17:9.42:0,9,86	0/0:34,0:34:19.03:0,19,391	0/1:18,4:22:66.24:148,0,66	0/0:13,0:13:17.67:0,18,125	0/0:10,0:9:17.96:0,18,148	0/1:13,0:12:43.22:43,0,159	0/0:25,0:24:19.73:0,20,268	0/0:10,0:9:14.88:0,15,104	0/0:21,0:21:25.99:0,26,153	0/0:33,0:31:40.81:0,41,340	0/1:17,0:15:10.23:10,0,81	0/0:29,0:29:30.52:0,31,335	0/1:22,0:21:5.94:6,0,135	0/0:15,0:15:20.43:0,20,155	./.
chr10	25067899	.	T	TATAG	5509.54	PASS	AB=0.955;AC=35;AF=0.729;AN=48;BaseQRankSum=-4.556;DP=488;FS=2.950;HRun=0;HaplotypeScore=135.7400;InbreedingCoeff=0.4484;MQ=58.45;MQ0=10;MQRankSum=1.771;QD=16.06;ReadPosRankSum=1.968;VQSLOD=4.2635;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:20,0:19:0.97:1,0,250	./.	0/0:16,0:9:18.90:0,19,238	0/0:13,0:8:6.58:0,7,40	0/1:19,0:18:0:0,0,0	0/1:18,0:16:5.80:6,0,17	1/1:6,0:5:5.79:37,6,0	0/0:21,0:34:13.49:0,13,207	0/1:18,0:15:0:0,0,0	1/1:17,0:17:20.34:150,20,0	1/1:13,0:13:11.63:77,12,0	1/1:19,0:18:2.99:25,3,0	./.	1/1:16,0:16:4.61:18,5,0	1/1:7,27:35:45.15:1103,45,0	1/1:13,0:12:3.47:26,3,0	1/1:4,13:16:33.11:808,33,0	0/1:6,5:9:25.45:415,0,25	1/1:2,13:15:39.09:902,39,0	1/1:18,14:31:60.17:1297,60,0	1/1:2,8:9:21.07:515,21,0	0/1:10,0:10:0:0,0,0	./.	0/1:14,0:12:0.15:0,0,1	1/1:12,0:11:2.84:14,3,0	1/1:17,0:14:5.96:45,6,0	./.	1/1:5,0:5:8.93:70,9,0
chr10	25067940	.	T	TATAG	5611.94	PASS	AB=0.842;AC=34;AF=0.739;AN=46;BaseQRankSum=-4.520;DP=506;FS=1.422;HRun=0;HaplotypeScore=144.8305;InbreedingCoeff=0.2675;MQ=53.47;MQ0=27;MQRankSum=3.302;QD=15.99;ReadPosRankSum=0.930;VQSLOD=4.3209;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:19,0:19:10.69:11,0,36	0/0:7,0:7:18.05:0,18,249	./.	./.	1/1:5,10:15:12.04:277,12,0	1/1:10,0:10:6.02:100,6,0	./.	./.	1/1:7,4:6:15.05:346,15,0	1/1:18,8:26:42.14:874,42,0	1/1:13,0:13:6.01:67,6,0	1/1:4,1:8:3.01:52,3,0	1/1:10,5:11:24.04:485,24,0	0/1:12,6:17:83.02:455,0,83	0/0:32,0:32:24.14:0,24,546	0/0:16,0:15:24.51:0,25,361	1/1:19,7:25:18.06:416,18,0	1/1:6,5:12:7.69:271,8,0	1/1:20,0:18:3.01:52,3,0	1/1:23,15:38:23.30:495,23,0	1/1:10,0:9:2.53:66,3,0	1/1:11,0:14:18:262,18,0	0/1:14,0:14:0:0,0,0	./.	1/1:14,0:13:7.55:94,8,0	0/1:21,4:20:99:546,0,175	0/1:10,9:20:13.68:367,0,14	0/1:12,3:14:99:376,0,104
chr10	25070047	.	C	CA	697.47	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=-8.316;DP=622;FS=0.000;HRun=7;HaplotypeScore=106.8490;InbreedingCoeff=0.6235;MQ=81.82;MQ0=0;MQRankSum=0.158;QD=17.44;ReadPosRankSum=-6.748;VQSLOD=1.5621;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:54:0,54,233	0/1:6,0:6:13.10:13,0,27	0/0:21,0:21:30.99:0,31,381	0/0:16,0:16:33.05:0,33,318	0/0:33,0:33:77.29:0,77,336	0/0:26,0:26:65.09:0,65,281	0/0:21,0:21:21.19:0,21,152	1/1:11,23:34:69.62:788,70,0	0/0:26,0:26:55.28:0,55,250	0/0:34,0:34:26.38:0,26,219	0/0:10,0:10:27.02:0,27,121	0/0:20,0:20:50.35:0,50,207	0/0:34,0:34:69.87:0,70,309	0/0:22,0:22:21.53:0,22,178	0/0:18,0:18:42.20:0,42,182	0/0:21,0:21:50.98:0,51,216	0/0:18,0:18:41.43:0,41,172	0/0:19,0:19:45.30:0,45,217	0/0:20,0:20:25.80:0,26,141	0/0:24,0:24:39.81:0,40,211	0/0:26,0:26:29.39:0,29,182	0/0:25,0:25:11.77:0,12,184	0/0:23,0:23:55.61:0,56,264	0/0:18,0:18:15.81:0,16,143	0/0:23,0:23:50.82:0,51,204	0/0:25,0:25:60.96:0,61,267	0/0:33,0:33:80.03:0,80,334	0/0:5,0:5:13.55:0,14,58
chr10	25070270	.	GGAA	G	19417.42	PASS	AB=1.000;AC=46;AF=0.821;AN=56;BaseQRankSum=0.852;DP=656;FS=6.440;HRun=0;HaplotypeScore=119.1122;InbreedingCoeff=0.2597;MQ=71.63;MQ0=2;MQRankSum=-3.847;QD=32.36;ReadPosRankSum=7.868;VQSLOD=4.3226;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:20:4.69:157,5,0	1/1:0,7:7:21.07:381,21,0	0/0:30,0:19:14.40:0,14,453	0/0:25,0:15:36.05:0,36,522	1/1:1,31:34:90:1421,90,0	1/1:0,23:24:48.16:860,48,0	1/1:1,21:23:51.07:872,51,0	0/1:31,0:31:99:195,0,142	1/1:0,25:27:69.23:1192,69,0	1/1:2,34:37:99:1749,108,0	1/1:0,18:18:47.94:721,48,0	1/1:0,21:22:54.15:946,54,0	1/1:0,22:22:48.16:861,48,0	1/1:0,30:31:81.28:1432,81,0	0/1:35,0:35:31.39:271,0,31	1/1:0,24:24:57.20:1040,57,0	0/1:14,0:14:12.87:107,0,13	0/1:14,0:14:7.57:102,0,8	0/1:17,0:17:24.49:136,0,24	1/1:35,0:35:57.90:371,58,0	0/1:10,0:10:24.24:66,0,24	1/1:0,21:21:47.98:786,48,0	1/1:7,14:21:58.34:848,58,0	1/1:0,17:18:41.97:725,42,0	1/1:1,12:16:42.14:691,42,0	1/1:0,31:33:96.08:1482,96,0	1/1:0,28:31:74.75:1282,75,0	1/1:0,13:15:42.14:724,42,0
chr10	25070271	.	GAAA	G	14226.34	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-4.291;DP=658;FS=17.346;HRun=13;HaplotypeScore=138.8080;InbreedingCoeff=0.9884;MQ=72.21;MQ0=2;MQRankSum=-4.822;QD=23.71;ReadPosRankSum=6.828;VQSLOD=1.8093;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,19:20:45.12:547,45,0	1/1:7,0:7:21.03:204,21,0	0/0:31,0:20:32.41:0,32,483	0/0:27,0:16:33.09:0,33,451	1/1:33,0:34:61.25:753,61,0	1/1:24,0:24:48.04:463,48,0	1/1:23,0:23:39.26:448,39,0	1/1:10,20:31:52.89:645,53,0	1/1:27,0:27:69.06:670,69,0	1/1:37,0:37:80.30:856,80,0	1/1:18,0:18:21.12:353,21,0	1/1:22,0:22:47.57:494,48,0	1/1:22,0:22:48.09:488,48,0	1/1:31,0:31:81.13:808,81,0	1/1:4,30:35:79.57:982,80,0	1/1:24,0:24:57.09:546,57,0	1/1:2,12:14:30.07:365,30,0	1/1:2,12:14:33.09:401,33,0	1/1:3,13:17:41.98:480,42,0	1/1:1,33:35:96.16:1149,96,0	1/1:2,8:10:24.06:292,24,0	1/1:21,0:21:25.30:400,25,0	1/1:21,0:21:17.48:381,17,0	1/1:18,0:18:34.87:373,35,0	1/1:16,0:16:41.99:392,42,0	1/1:33,0:33:36.02:628,36,0	1/1:31,0:31:65.35:699,65,0	1/1:15,0:15:42.05:409,42,0
chr10	25071299	.	ATGTGTGTGTGTGTGTG	A	4195.94	PASS	AB=0.923;AC=13;AF=0.241;AN=54;BaseQRankSum=3.003;DP=639;FS=12.169;HRun=0;HaplotypeScore=258.6641;InbreedingCoeff=0.6344;MQ=59.42;MQ0=20;MQRankSum=-5.305;QD=25.90;ReadPosRankSum=-0.357;VQSLOD=0.7558;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:21:12:0,12,150	0/0:10,0:10:14.87:0,15,593	0/0:32,0:22:15.02:0,15,256	0/0:40,0:29:26.99:0,27,508	0/0:19,0:17:24.06:0,24,598	0/0:16,0:16:14.95:0,15,590	0/0:31,0:31:35.72:0,36,1276	1/1:17,5:21:10.69:145,11,0	0/0:21,0:20:29.46:0,29,788	0/0:38,0:36:51.17:0,51,2052	0/0:13,0:13:9.03:0,9,201	0/0:16,0:27:15.02:0,15,384	0/0:16,0:28:31.86:0,32,776	0/0:15,0:17:29.98:0,30,717	1/1:11,18:27:30.43:1743,30,0	0/0:26,0:26:48.13:0,48,1260	1/1:20,3:22:29.63:866,30,0	0/1:12,2:14:99:461,0,130	0/1:15,1:17:11.13:233,0,11	1/1:8,4:12:18.05:606,18,0	1/1:31,0:30:6.02:115,6,0	./.	0/0:22,0:20:21.07:0,21,763	0/0:37,0:35:32.82:0,33,1042	0/1:12,0:13:27.13:27,0,280	0/0:18,0:17:36.12:0,36,1501	0/0:22,0:29:36.73:0,37,1137	0/0:4,0:5:9.01:0,9,259
chr10	25071391	.	C	CGT	5959.56	PASS	AB=0.576;AC=12;AF=0.214;AN=56;BaseQRankSum=-8.798;DP=710;FS=2.208;HRun=0;HaplotypeScore=109.0007;InbreedingCoeff=0.7945;MQ=53.66;MQ0=23;MQRankSum=-4.151;QD=27.21;ReadPosRankSum=0.185;VQSLOD=5.7260;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:36:84.23:0,84,1013	0/0:7,0:7:15.05:0,15,185	0/0:49,0:11:6.01:0,6,68	0/0:56,0:16:15.80:0,16,117	0/0:19,0:19:54.15:0,54,651	0/0:18,0:18:54.05:0,54,632	0/0:29,0:29:72.20:0,72,870	1/1:9,15:24:12.70:666,13,0	0/0:21,0:21:51.09:0,51,585	0/0:17,0:17:42.11:0,42,488	0/0:16,0:17:44.52:0,45,501	0/0:23,0:23:66.12:0,66,789	0/0:22,0:22:48.45:0,48,566	0/0:27,0:27:69.03:0,69,809	1/1:14,11:24:39.12:609,39,0	0/0:23,0:23:54.15:0,54,639	1/1:2,33:35:84.29:1368,84,0	1/1:3,15:17:36.12:586,36,0	1/1:10,6:14:19.31:285,19,0	0/1:9,17:27:3.24:763,0,3	0/1:14,59:73:10.88:1683,0,11	0/0:17,0:17:45.14:0,45,547	0/0:11,0:11:30.09:0,30,368	0/0:32,0:32:33.10:0,33,610	0/0:21,0:21:45.35:0,45,530	0/0:19,0:19:42.12:0,42,506	0/0:20,0:20:45.09:0,45,537	0/0:5,0:5:9.91:0,10,144
chr10	25071432	.	TTG	T	642.67	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.101;DP=705;FS=1.755;HRun=0;HaplotypeScore=105.6415;InbreedingCoeff=0.9515;MQ=58.58;MQ0=8;MQRankSum=1.804;QD=21.42;ReadPosRankSum=4.367;VQSLOD=3.9653;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,25:29:59.93:738,60,0	0/0:8,0:8:18.06:0,18,301	0/0:33,0:17:37.11:0,37,491	0/0:32,0:13:23.21:0,23,326	0/0:20,0:20:48.15:0,48,773	0/0:16,0:16:42.14:0,42,698	0/0:23,0:23:45.14:0,45,687	0/0:37,0:37:87.22:0,87,1375	0/0:21,0:20:50.84:0,51,808	0/0:23,0:23:63.20:0,63,1002	0/0:22,0:22:63.20:0,63,1018	0/0:25,0:25:66.21:0,66,1071	0/0:31,0:31:81.22:0,81,1249	0/0:27,0:27:69.21:0,69,1105	0/0:26,0:25:66.21:0,66,1060	0/0:31,0:31:75.22:0,75,1159	0/0:38,0:38:84.23:0,84,1320	0/0:22,0:21:47.64:0,48,780	0/0:17,0:15:32.21:0,32,426	0/0:27,0:26:66.20:0,66,1032	0/0:62,0:61:99:0,111,1644	0/0:15,0:15:36.12:0,36,596	0/0:13,0:13:33.10:0,33,513	0/0:33,0:33:81.21:0,81,1312	0/0:24,1:25:55.24:0,55,973	0/0:17,0:16:42.14:0,42,682	0/0:26,0:26:66.89:0,67,1128	0/0:5,0:5:10.85:0,11,146
chr10	25071836	.	GA	G	11567.75	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-2.512;DP=551;FS=14.979;HRun=9;HaplotypeScore=55.1931;InbreedingCoeff=0.9306;MQ=72.56;MQ0=0;MQRankSum=-4.615;QD=22.37;ReadPosRankSum=4.117;VQSLOD=4.2402;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,14:14:39.02:357,39,0	1/1:2,9:11:15:136,15,0	0/0:17,0:17:26.77:0,27,254	0/0:17,0:11:15.04:0,15,173	1/1:2,28:30:74.88:660,75,0	1/1:1,26:27:72.04:659,72,0	1/1:2,22:24:51.02:467,51,0	1/1:9,25:34:71.94:641,72,0	1/1:1,15:16:36.02:330,36,0	1/1:0,21:21:62.98:560,63,0	1/1:1,20:21:57.03:521,57,0	1/1:2,16:18:39.02:357,39,0	1/1:2,12:14:36.02:330,36,0	1/1:1,23:24:60.03:549,60,0	1/1:3,17:19:51.03:467,51,0	1/1:2,18:20:39.02:357,39,0	1/1:1,22:23:60.03:549,60,0	1/1:1,10:11:24.01:220,24,0	1/1:3,16:19:48:431,48,0	1/1:5,22:27:66.03:604,66,0	1/1:0,13:13:36.02:330,36,0	1/1:1,15:16:39.01:355,39,0	1/1:1,12:13:33.02:302,33,0	1/1:1,13:14:33.02:302,33,0	1/1:3,22:25:60.02:549,60,0	1/1:2,24:26:72.04:658,72,0	1/1:2,32:34:90.05:823,90,0	1/1:0,2:2:6:55,6,0
chr10	25072250	.	CT	C	6678.86	PASS	AB=1.000;AC=37;AF=0.661;AN=56;BaseQRankSum=11.446;DP=462;FS=0.412;HRun=9;HaplotypeScore=48.3164;InbreedingCoeff=0.9122;MQ=67.84;MQ0=1;MQRankSum=0.675;QD=21.90;ReadPosRankSum=4.300;VQSLOD=5.2469;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:18:48.12:0,48,535	1/1:1,5:6:15.01:137,15,0	0/1:8,0:7:21.46:21,0,25	0/0:11,0:10:23.55:0,24,239	1/1:7,21:28:59.96:540,60,0	1/1:3,18:21:51.03:467,51,0	1/1:2,15:17:45.02:412,45,0	0/0:25,0:25:66.16:0,66,739	1/1:1,9:10:27.01:247,27,0	1/1:2,21:23:60.02:549,60,0	1/1:1,16:17:48.02:439,48,0	1/1:2,18:20:51.02:467,51,0	1/1:1,13:14:33.01:302,33,0	1/1:4,15:19:39.01:357,39,0	0/0:11,0:11:25.32:0,25,280	1/1:0,24:24:62.93:577,63,0	0/0:13,0:13:27.08:0,27,312	0/0:19,0:19:48.08:0,48,527	0/0:14,0:14:30.08:0,30,338	0/0:33,0:33:84.21:0,84,935	0/0:12,0:12:30.08:0,30,336	1/1:2,8:10:21:192,21,0	1/1:1,13:14:33.01:302,33,0	1/1:0,10:10:27.01:247,27,0	1/1:4,23:27:66.03:604,66,0	1/1:1,16:17:45:406,45,0	1/1:5,11:16:33.01:302,33,0	1/1:0,4:4:12.01:110,12,0
chr10	25072388	.	CTT	C	5368.35	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=2.954;DP=427;FS=2.450;HRun=12;HaplotypeScore=60.7178;InbreedingCoeff=0.9750;MQ=67.52;MQ0=0;MQRankSum=0.387;QD=20.81;ReadPosRankSum=5.164;VQSLOD=4.2537;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:69.15:0,69,929	1/1:1,5:6:9.01:92,9,0	0/0:9,0:8:14.34:0,14,143	0/0:20,0:16:31.80:0,32,325	1/1:3,16:20:38.64:365,39,0	1/1:2,15:17:39.07:397,39,0	1/1:2,7:9:21.03:214,21,0	0/0:17,0:17:42.13:0,42,587	1/1:1,13:14:36.06:366,36,0	1/1:1,14:16:41.80:409,42,0	1/1:3,12:15:23.98:244,24,0	1/1:1,18:19:36.08:366,36,0	1/1:2,13:15:36.07:366,36,0	1/1:3,15:18:36.07:366,36,0	0/0:11,0:12:29.57:0,30,374	1/1:0,23:23:51.11:519,51,0	0/0:28,0:28:80.74:0,81,1129	0/0:13,0:15:35.06:0,35,426	0/0:14,0:14:21.07:0,21,312	0/0:15,0:15:42.34:0,42,519	0/0:10,0:13:28.51:0,29,313	1/1:1,8:9:21.04:213,21,0	1/1:1,8:9:16.73:174,17,0	1/1:1,7:9:20.76:195,21,0	1/1:3,18:22:27.06:407,27,0	1/1:7,11:20:32.66:299,33,0	1/1:2,11:14:29.80:286,30,0	1/1:0,3:3:9.02:92,9,0
chr10	25072605	.	A	AT	801.51	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-7.966;DP=545;FS=0.735;HRun=8;HaplotypeScore=65.7147;InbreedingCoeff=0.9710;MQ=82.08;MQ0=0;MQRankSum=1.679;QD=25.86;ReadPosRankSum=-4.422;VQSLOD=2.4091;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:57.02:0,57,521	0/0:7,0:7:21:0,21,188	0/0:15,0:15:21.83:0,22,240	0/0:16,0:16:38.99:0,39,348	0/0:27,0:27:75.01:0,75,681	0/0:22,0:22:57.03:0,57,522	0/0:19,0:19:51.03:0,51,466	1/1:3,28:31:56.76:896,57,0	0/0:12,0:12:33.02:0,33,302	0/0:17,0:16:42.02:0,42,384	0/0:23,0:23:63.03:0,63,577	0/0:23,0:23:63.03:0,63,576	0/0:19,0:19:48.02:0,48,439	0/0:23,0:23:63.03:0,63,576	0/0:15,0:15:42.02:0,42,384	0/0:20,0:20:48.02:0,48,439	0/0:27,0:27:71.97:0,72,645	0/0:9,0:9:20.98:0,21,186	0/0:20,0:20:42.01:0,42,381	0/0:35,0:35:93.03:0,93,847	0/0:14,0:14:42.02:0,42,384	0/0:20,0:20:51.03:0,51,467	0/0:19,0:19:51.01:0,51,462	0/0:13,0:13:33.02:0,33,302	0/0:19,1:20:25.41:0,25,487	0/0:23,0:23:63.01:0,63,570	0/0:28,0:28:81.04:0,81,741	0/0:7,0:7:14.98:0,15,137
chr10	25072883	.	T	TTTTG	14159.20	PASS	AB=0.670;AC=34;AF=0.607;AN=56;BaseQRankSum=-13.834;DP=647;FS=1.427;HRun=0;HaplotypeScore=111.2799;InbreedingCoeff=0.8149;MQ=63.73;MQ0=5;MQRankSum=1.033;QD=33.01;ReadPosRankSum=-0.365;VQSLOD=4.2972;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:54.13:0,54,782	1/1:4,5:9:15.05:356,15,0	0/0:13,0:8:6.02:0,6,87	0/0:21,0:19:12.21:0,12,181	1/1:8,21:29:57.15:1302,57,0	1/1:12,15:28:39.13:909,39,0	1/1:5,11:16:33.11:784,33,0	0/0:23,0:23:17.91:0,18,244	1/1:12,20:32:39.13:926,39,0	0/1:15,13:28:5.16:835,0,5	0/1:10,11:21:61.51:538,0,62	1/1:10,12:23:27.09:641,27,0	1/1:12,15:27:33.11:780,33,0	1/1:22,9:31:24.08:570,24,0	0/0:7,0:25:51.06:0,51,475	1/1:12,19:32:24.42:1113,24,0	0/0:12,0:24:26.26:0,26,217	0/0:8,0:19:27.02:0,27,248	0/0:9,0:15:14.97:0,15,127	0/0:6,0:22:42.04:0,42,387	0/0:11,0:28:51.06:0,51,475	1/1:9,13:23:42.14:985,42,0	1/1:12,14:26:30.49:713,30,0	1/1:7,20:28:36.12:855,36,0	1/1:5,5:10:12.04:285,12,0	1/1:10,13:23:42.12:908,42,0	1/1:11,18:29:3.95:1089,4,0	1/1:3,8:11:24.08:570,24,0
chr10	25073056	.	CAA	C	1208.49	PASS	AB=0.944;AC=17;AF=0.304;AN=56;BaseQRankSum=2.061;DP=482;FS=4.760;HRun=16;HaplotypeScore=76.3482;InbreedingCoeff=0.8166;MQ=71.36;MQ0=0;MQRankSum=6.740;QD=8.45;ReadPosRankSum=7.215;VQSLOD=1.0865;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,2:26:55.31:263,55,0	0/0:6,0:6:18.05:0,18,208	0/0:25,0:22:38.79:0,39,419	0/1:16,0:13:8.06:8,0,89	0/0:17,0:24:45.89:0,46,447	0/0:12,0:24:23.99:0,24,258	0/0:14,0:14:30.07:0,30,323	1/1:4,9:13:14.74:120,15,0	0/0:26,0:26:54.53:0,55,582	0/0:19,0:24:53.96:0,54,531	0/0:19,0:19:41.86:0,42,377	0/0:11,0:11:27:0,27,295	0/0:20,0:21:51.09:0,51,567	0/0:16,0:16:33.09:0,33,379	1/1:7,10:17:0.38:152,0,0	0/0:21,0:24:42.08:0,42,482	1/1:5,3:8:2.76:25,3,0	1/1:3,10:13:6.96:181,7,0	1/1:2,8:10:17.74:146,18,0	1/1:5,13:21:24.19:263,24,0	1/1:8,6:18:30.55:241,31,0	0/0:6,0:11:24.74:0,25,251	0/0:6,0:11:17.80:0,18,183	0/0:9,0:9:9.01:0,9,85	0/0:13,0:13:29.91:0,30,280	0/0:29,0:29:57.07:0,57,617	0/0:19,0:19:41.98:0,42,429	0/0:9,0:7:14.98:0,15,146
chr10	25073059	.	A	AAA	4822.06	PASS	AB=1.000;AC=37;AF=0.661;AN=56;BaseQRankSum=4.939;DP=486;FS=14.569;HRun=13;HaplotypeScore=140.2925;InbreedingCoeff=0.8581;MQ=69.41;MQ0=0;MQRankSum=-7.073;QD=14.93;ReadPosRankSum=-7.698;VQSLOD=-0.3555;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:53.27:0,53,225	1/1:6,0:6:15.02:142,15,0	0/0:24,0:19:23.54:0,24,162	0/1:19,0:15:2:2,0,20	1/1:23,0:22:44.94:406,45,0	1/1:24,0:24:19.26:175,19,0	1/1:13,0:13:24:224,24,0	0/0:12,0:12:11.15:0,11,47	1/1:25,0:25:48.47:442,48,0	1/1:25,0:24:48.06:427,48,0	1/1:13,4:18:31.17:265,31,0	1/1:12,0:12:24.03:227,24,0	1/1:21,0:21:48.04:451,48,0	1/1:13,0:13:30.02:280,30,0	0/0:19,0:19:18.04:0,18,79	1/1:25,0:24:36:330,36,0	0/0:12,0:12:4.78:0,5,22	0/0:17,0:17:1.46:0,1,69	0/0:11,0:11:13.96:0,14,57	0/0:24,0:24:29.86:0,30,134	0/0:17,0:17:36.93:0,37,154	1/1:10,0:10:22.23:195,22,0	1/1:11,0:11:15.01:140,15,0	1/1:10,0:10:9.01:84,9,0	1/1:14,0:14:18.73:141,19,0	1/1:26,0:26:45.07:452,45,0	1/1:19,0:19:42.03:392,42,0	1/1:9,0:7:7.20:46,7,0
chr10	25073240	.	A	ATTGT	28980.18	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-7.265;DP=474;FS=25.832;HRun=0;HaplotypeScore=60.1188;InbreedingCoeff=0.9556;MQ=72.42;MQ0=1;MQRankSum=-7.151;QD=64.26;ReadPosRankSum=4.717;VQSLOD=4.0061;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,17:19:45.15:1090,45,0	1/1:0,7:7:18.06:486,18,0	0/0:14,0:15:45.13:0,45,738	0/0:8,0:8:12.10:0,12,301	1/1:1,20:21:51.17:1333,51,0	1/1:2,14:16:48.16:1252,48,0	1/1:1,10:12:30.10:808,30,0	1/1:7,33:42:99:2760,114,0	1/1:1,11:12:30.10:808,30,0	1/1:3,13:16:36.12:970,36,0	1/1:1,20:22:48.16:1292,48,0	1/1:0,16:16:45.15:1213,45,0	1/1:0,8:9:21.07:566,21,0	1/1:1,12:13:30.10:809,30,0	1/1:0,15:15:42.14:1132,42,0	1/1:1,18:20:42.14:1132,42,0	1/1:1,14:16:27.56:687,28,0	1/1:1,12:15:33.11:888,33,0	1/1:2,5:12:33.09:763,33,0	1/1:2,23:25:72.25:1898,72,0	1/1:0,7:6:18.06:486,18,0	1/1:0,14:14:39.09:990,39,0	1/1:4,18:26:57.07:1360,57,0	1/1:1,6:9:11.68:323,12,0	1/1:1,22:24:63.22:1699,63,0	1/1:2,26:29:84.29:2213,84,0	1/1:0,14:17:39.13:1051,39,0	1/1:2,12:14:36.12:969,36,0
chr10	25073428	.	C	CAGATAGATAGAT	10337.75	PASS	AC=38;AF=0.731;AN=52;BaseQRankSum=-5.998;DP=618;FS=3.574;HRun=0;HaplotypeScore=158.2586;InbreedingCoeff=0.7571;MQ=61.88;MQ0=11;MQRankSum=-5.491;QD=23.60;ReadPosRankSum=-1.502;VQSLOD=3.5105;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:18:7.99:240,8,0	1/1:2,7:10:6.02:349,6,0	0/0:27,0:22:5.94:0,6,41	./.	1/1:13,13:25:3.01:140,3,0	1/1:7,14:22:12.04:699,12,0	1/1:12,0:10:6.02:141,6,0	1/1:40,0:37:39.05:623,39,0	1/1:3,9:17:6.02:349,6,0	1/1:12,20:35:51.14:1669,51,0	1/1:16,2:19:6.02:251,6,0	1/1:6,14:23:12.04:699,12,0	1/1:9,14:28:6.02:349,6,0	1/1:12,15:33:15.05:873,15,0	0/0:32,0:32:63.20:0,63,1865	1/1:8,16:33:9.03:524,9,0	0/0:27,0:26:19.55:0,20,1040	0/0:15,0:15:23.67:0,24,594	0/0:19,0:15:21.07:0,21,700	0/0:26,0:26:36.11:0,36,1081	0/0:16,0:16:30.10:0,30,898	1/1:9,1:10:6.02:225,6,0	1/1:9,1:9:3.01:174,3,0	1/1:8,4:12:9.03:421,9,0	1/1:8,19:28:9.03:524,9,0	1/1:11,10:29:54.11:1253,54,0	1/1:18,2:20:27.06:837,27,0	./.
chr10	25073523	.	CATAG	C	1355.13	PASS	AB=0.821;AC=20;AF=0.417;AN=48;BaseQRankSum=-3.273;DP=533;FS=7.618;HRun=0;HaplotypeScore=157.8540;InbreedingCoeff=0.1220;MQ=43.21;MQ0=46;MQRankSum=0.421;QD=4.46;ReadPosRankSum=-5.451;VQSLOD=-0.1969;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:14:5:0,5,47	0/0:8,0:8:2.98:0,3,21	./.	./.	0/0:14,0:14:2.96:0,3,19	0/0:19,0:18:2.98:0,3,23	0/1:13,0:10:0.01:0,0,0	./.	0/0:11,0:10:2.98:0,3,22	0/1:13,0:13:15.26:22,0,15	0/0:9,0:11:2.37:0,2,8	0/0:18,0:19:2.92:0,3,17	0/0:20,0:20:5.97:0,6,44	1/1:19,0:22:2.62:11,3,0	1/1:20,10:32:15.05:231,15,0	1/1:22,0:22:3:28,3,0	0/1:25,10:32:8.13:331,0,8	1/1:7,8:14:12.04:185,12,0	0/1:8,3:8:12.97:84,0,13	0/1:22,20:37:13.87:427,0,14	1/1:12,5:17:5.77:92,6,0	0/0:11,0:12:3:0,3,25	1/1:10,0:17:1.53:4,2,0	0/1:10,0:11:0:0,0,0	0/1:16,0:20:10.64:22,0,11	0/0:17,0:17:14.81:0,15,101	0/1:12,0:27:19.08:54,0,19	./.
chr10	25073672	.	GATAC	G	1640.01	PASS	AB=0.950;AC=13;AF=0.241;AN=54;BaseQRankSum=3.150;DP=676;FS=3.358;HRun=0;HaplotypeScore=187.2880;InbreedingCoeff=-0.1175;MQ=42.82;MQ0=30;MQRankSum=-5.030;QD=5.39;ReadPosRankSum=-1.452;VQSLOD=2.7423;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:34:46.89:0,47,959	0/0:5,0:5:6.47:0,6,155	0/0:19,0:4:9.42:0,9,67	./.	0/0:46,0:43:45.26:0,45,874	0/0:27,0:25:36.07:0,36,617	0/0:10,0:5:9.01:0,9,155	1/1:37,0:22:59.77:477,60,0	0/0:14,0:12:19.29:0,19,403	0/1:43,0:42:99:190,0,778	0/1:29,0:28:10.02:10,0,668	0/0:18,0:18:4.26:0,4,328	0/0:19,0:16:32.58:0,33,589	0/0:39,0:38:60.01:0,60,951	0/1:28,8:33:99:450,0,393	0/0:35,0:33:24.01:0,24,334	0/1:26,0:23:57.99:94,0,58	0/1:11,0:8:15.98:27,0,16	0/1:9,0:4:32.35:38,0,32	0/1:38,0:38:99:129,0,219	0/0:20,0:17:16.20:0,16,174	0/1:7,10:16:9.42:197,0,9	0/0:30,0:30:43.75:0,44,916	0/0:14,0:14:17.99:0,18,223	0/1:18,0:18:9.43:9,0,457	0/1:34,0:32:99:145,0,424	0/0:30,0:27:42.94:0,43,681	0/1:6,0:6:27.93:28,0,70
chr10	25073680	.	AATACATAG	A	4486.35	PASS	AB=0.916;AC=21;AF=0.389;AN=54;BaseQRankSum=-1.146;DP=640;FS=9.629;HRun=0;HaplotypeScore=195.2164;InbreedingCoeff=0.0235;MQ=42.34;MQ0=29;MQRankSum=-2.319;QD=11.53;ReadPosRankSum=-3.678;VQSLOD=2.0694;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:31:33.91:0,34,823	1/1:4,1:5:3:77,3,0	0/0:22,0:5:2.49:0,2,6	./.	0/1:38,5:42:58.11:399,0,58	0/1:23,1:21:10.90:11,0,83	0/1:6,0:4:0:0,0,0	0/0:42,0:28:60.03:0,60,627	1/1:11,1:12:6.02:135,6,0	0/1:38,5:42:65.65:1157,0,66	0/1:22,2:23:1.04:306,0,1	0/1:13,4:17:56.45:282,0,56	0/1:17,1:16:31.53:45,0,32	0/1:33,2:34:94.99:180,0,95	0/0:34,0:31:42.14:0,42,830	0/1:30,2:31:17.05:32,0,17	0/0:23,0:20:17.91:0,18,464	0/0:12,0:8:8.80:0,9,146	0/0:9,0:3:8.99:0,9,172	0/0:37,0:37:44.94:0,45,1042	0/0:19,0:17:24.08:0,24,523	1/1:16,0:16:17.82:134,18,0	1/1:28,2:30:20.93:313,21,0	0/0:9,1:10:2.90:0,3,67	0/1:11,4:15:2.49:199,0,2	0/1:28,5:31:32.38:1061,0,32	0/1:28,2:28:27.96:141,0,28	0/1:6,0:6:13.03:13,0,13
chr10	25073728	.	GATAGATAGATA	G	3583.71	PASS	AB=1.000;AC=43;AF=0.796;AN=54;BaseQRankSum=-2.856;DP=553;FS=0.000;HRun=0;HaplotypeScore=166.1322;InbreedingCoeff=0.3195;MQ=39.01;MQ0=20;MQRankSum=1.482;QD=6.99;ReadPosRankSum=2.119;VQSLOD=1.8573;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:15:6.15:94,6,0	0/1:5,0:5:0.01:0,0,0	0/0:20,0:1:3.01:0,3,34	0/0:5,0:2:2.23:0,2,21	0/1:39,0:38:0:0,0,0	1/1:24,0:19:1.34:92,1,0	1/1:7,0:5:3.01:32,3,0	1/1:16,0:11:14.40:171,14,0	0/0:10,0:7:0:0,0,0	1/1:9,28:36:64.81:1236,65,0	1/1:20,0:19:5.59:99,6,0	1/1:11,0:11:6:57,6,0	1/1:13,0:11:5.95:93,6,0	1/1:29,0:27:2.81:28,3,0	0/1:25,0:21:0:0,0,0	0/1:31,0:27:0:0,0,0	1/1:21,0:16:7.45:119,7,0	1/1:16,0:7:4.26:48,4,0	1/1:13,0:7:2.66:328,3,0	0/1:31,0:31:0:0,0,1	1/1:21,0:16:5.81:144,6,0	1/1:8,0:7:2.88:25,3,0	1/1:30,0:28:2.68:25,3,0	1/1:8,0:5:3:25,3,0	1/1:15,0:15:5.94:150,6,0	1/1:38,0:36:44.49:562,44,0	1/1:35,0:32:17.84:258,18,0	./.
chr10	25073736	.	GATA	G	3631.24	PASS	AB=0.591;AC=42;AF=0.778;AN=54;BaseQRankSum=-2.050;DP=504;FS=0.000;HRun=0;HaplotypeScore=117.5341;InbreedingCoeff=0.3446;MQ=38.31;MQ0=21;MQRankSum=0.604;QD=7.81;ReadPosRankSum=2.525;VQSLOD=2.3824;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:13,5:13:0.99:83,0,1	0/1:1,3:4:0:0,0,0	0/0:19,0:1:3.01:0,3,33	0/0:5,0:2:2.48:0,2,23	0/1:8,28:35:0:0,0,0	1/1:4,20:19:7.85:106,8,0	1/1:1,5:4:3.01:50,3,0	1/1:14,0:9:15.04:211,15,0	0/0:8,2:7:0:0,0,0	1/1:30,0:30:66.43:988,66,0	1/1:5,11:15:5.67:100,6,0	1/1:5,5:10:6.02:100,6,0	1/1:4,6:8:6.02:100,6,0	1/1:26,0:25:2.77:45,3,0	0/1:5,19:20:0:0,0,0	0/1:4,26:27:0:0,0,0	1/1:16,2:13:11.65:123,12,0	1/1:3,11:5:4.20:22,4,0	1/1:6,7:7:16.87:251,17,0	0/1:4,25:28:0:0,0,1	1/1:8,13:15:5.86:100,6,0	1/1:2,5:5:3.01:50,3,0	1/1:0,29:27:2.76:50,3,0	1/1:2,5:3:3.01:50,3,0	1/1:2,8:10:6.02:100,6,0	1/1:4,29:31:52.90:804,53,0	1/1:3,33:33:17.87:300,18,0	./.
chr10	25073739	.	A	AG	1971.11	PASS	AB=0.912;AC=41;AF=0.788;AN=52;BaseQRankSum=-2.541;DP=464;FS=1.901;HRun=0;HaplotypeScore=107.9557;InbreedingCoeff=0.3133;MQ=37.18;MQ0=20;MQRankSum=1.134;QD=4.63;ReadPosRankSum=3.042;VQSLOD=3.2113;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:11,8:14:6.52:83,0,7	./.	0/0:18,0:1:3.01:0,3,34	0/0:5,0:2:2.13:0,2,22	0/1:29,2:29:0:0,0,0	1/1:20,1:17:4.30:23,4,0	1/1:5,0:4:2.94:18,3,0	1/1:5,6:7:15.05:236,15,0	0/0:2,5:6:0:0,0,0	1/1:31,0:30:55.61:549,56,0	1/1:13,1:13:4.25:22,4,0	1/1:6,4:10:5.94:43,6,0	1/1:9,0:9:8.91:72,9,0	1/1:2,19:20:2.78:45,3,0	0/1:20,1:17:0.04:0,0,0	0/1:26,1:24:0:0,0,0	1/1:8,10:13:12.90:167,13,0	1/1:12,2:5:4.99:25,5,0	1/1:12,1:7:14.23:101,14,0	0/1:25,0:24:0:0,0,1	1/1:17,1:12:3.11:8,3,0	1/1:7,0:4:2.94:18,3,0	1/1:30,0:27:2.61:15,3,0	1/1:5,2:3:2.94:18,3,0	1/1:8,1:9:3.11:8,3,0	1/1:31,0:28:52.11:552,52,0	1/1:33,0:32:14.45:70,14,0	./.
chr10	25073854	.	GGATA	G	405.97	PASS	AB=0.864;AC=16;AF=0.333;AN=48;BaseQRankSum=-0.059;DP=601;FS=1.934;HRun=0;HaplotypeScore=176.7988;InbreedingCoeff=0.2612;MQ=38.42;MQ0=43;MQRankSum=-0.992;QD=1.60;ReadPosRankSum=-0.135;VQSLOD=2.7258;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,1:35:20.34:0,20,194	0/0:16,0:15:15.03:0,15,261	./.	./.	0/0:20,0:20:21.05:0,21,377	1/1:3,2:3:2.99:24,3,0	0/0:12,2:10:0:0,0,0	0/0:53,0:36:15.28:0,15,100	0/0:16,4:17:7.86:0,8,140	0/1:25,1:23:4.69:5,0,657	./.	0/0:29,0:27:39.12:0,39,708	0/1:20,6:20:9.05:33,0,9	0/0:27,0:26:24.05:0,24,386	1/1:31,10:40:2.42:22,2,0	1/1:3,6:8:3.01:38,3,0	0/0:20,1:16:12:0,12,111	0/0:9,2:9:3.85:0,4,19	0/1:14,3:10:18.30:40,0,18	1/1:31,8:33:14.84:124,15,0	1/1:16,4:15:2.99:24,3,0	0/1:28,0:24:3.59:4,0,131	0/0:11,4:9:5.98:0,6,47	./.	0/0:26,3:26:36.09:0,36,669	0/1:19,6:18:99:159,0,171	0/1:12,6:13:78.57:79,0,133	0/0:4,0:4:12.04:0,12,241
chr10	25073883	.	G	GATAC	349.31	PASS	AB=1.000;AC=13;AF=0.260;AN=50;BaseQRankSum=1.103;DP=645;FS=5.547;HRun=0;HaplotypeScore=157.7185;InbreedingCoeff=0.3243;MQ=33.32;MQ0=98;MQRankSum=-0.036;QD=1.76;ReadPosRankSum=-1.385;VQSLOD=2.1852;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:29:23.28:0,23,173	0/0:16,0:15:15.05:0,15,262	./.	./.	0/0:25,0:23:27.04:0,27,381	0/0:9,0:4:2.99:0,3,24	0/0:13,0:8:5.99:0,6,50	0/0:54,0:31:63.64:0,64,415	0/0:27,0:19:12.03:0,12,158	0/0:31,0:27:66.32:0,66,772	./.	0/0:38,0:29:39.12:0,39,684	0/1:26,0:17:15.20:15,0,27	0/0:37,0:31:24.05:0,24,371	1/1:31,0:24:11.89:89,12,0	1/1:16,0:10:0.89:2,1,0	0/0:19,0:10:16.57:0,17,180	0/1:11,0:7:5.68:6,0,47	0/1:20,0:11:45.27:89,0,45	1/1:30,2:25:25.67:208,26,0	1/1:10,2:10:5.99:50,6,0	0/0:38,0:26:2.46:0,2,247	0/0:14,0:7:6.01:0,6,81	0/0:19,0:13:0:0,0,0	0/0:37,0:30:36.10:0,36,593	0/1:30,0:20:29.24:29,0,308	0/1:21,0:12:5.37:5,0,108	0/0:12,0:8:15.02:0,15,249
chr10	25073891	.	G	GATAC	630.46	PASS	AB=0.985;AC=17;AF=0.354;AN=48;BaseQRankSum=-0.423;DP=607;FS=2.707;HRun=0;HaplotypeScore=131.8080;InbreedingCoeff=0.1808;MQ=31.84;MQ0=101;MQRankSum=-3.109;QD=2.10;ReadPosRankSum=-1.683;VQSLOD=2.3183;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,2:28:22.34:0,22,155	0/0:15,0:14:15.01:0,15,248	./.	./.	0/0:25,0:22:21.04:0,21,294	1/1:9,0:3:2.99:24,3,0	0/0:11,0:5:0:0,0,0	0/1:46,0:25:11.98:12,0,93	0/0:25,1:18:12:0,12,149	0/1:30,0:24:7.83:8,0,560	./.	0/0:39,0:28:39.12:0,39,666	0/1:22,0:12:8.99:49,0,9	0/0:33,0:27:24.05:0,24,371	1/1:30,0:21:2.98:23,3,0	1/1:16,0:10:3.01:38,3,0	0/0:17,0:9:11.93:0,12,93	0/0:12,0:8:3.78:0,4,19	0/1:18,0:9:9.34:103,0,9	1/1:29,1:22:14.84:124,15,0	1/1:11,0:8:2.99:24,3,0	0/1:36,0:22:7.43:7,0,78	0/0:13,1:6:5.98:0,6,47	./.	0/0:35,0:28:36.07:0,36,550	0/1:28,2:19:99:285,0,145	0/1:20,1:12:80.31:80,0,108	0/0:12,0:8:3.51:0,4,215
chr10	25073895	.	GATAC	G	182.55	PASS	AB=0.989;AC=16;AF=0.320;AN=50;BaseQRankSum=2.736;DP=578;FS=6.382;HRun=0;HaplotypeScore=122.1813;InbreedingCoeff=0.1266;MQ=31.09;MQ0=99;MQRankSum=-4.553;QD=0.58;ReadPosRankSum=-1.871;VQSLOD=1.2327;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:38,0:28:2.92:3,0,232	0/0:13,0:12:14.98:0,15,202	./.	./.	0/0:25,0:21:16.30:0,16,319	0/0:9,0:3:0:0,0,0	0/0:9,1:3:0:0,0,0	0/1:38,4:22:52.59:53,0,80	0/0:23,0:15:8.81:0,9,88	0/0:30,0:23:29.69:0,30,530	0/1:11,0:8:0:0,0,0	0/0:36,0:26:36.04:0,36,592	1/1:20,0:10:3.48:49,3,0	0/0:33,0:25:17.97:0,18,260	0/1:28,0:19:0.02:0,0,0	1/1:17,0:10:2.97:20,3,0	0/0:16,0:8:8.94:0,9,79	0/1:11,0:7:12.33:14,0,12	0/1:17,0:8:16.55:17,0,65	1/1:30,0:21:2.77:16,3,0	./.	0/1:34,0:20:28.60:29,0,217	0/0:15,0:7:2.79:0,3,46	0/1:17,0:12:0:0,0,0	0/0:34,0:27:30.02:0,30,491	0/1:29,0:17:65.56:66,0,124	0/1:18,0:11:44.70:45,0,65	0/0:12,0:8:15.02:0,15,241
chr10	25073923	.	CATAG	C	2757.55	PASS	AB=0.806;AC=38;AF=0.792;AN=48;BaseQRankSum=-2.358;DP=502;FS=0.000;HRun=0;HaplotypeScore=98.8369;InbreedingCoeff=-0.0031;MQ=29.52;MQ0=97;MQRankSum=4.827;QD=6.22;ReadPosRankSum=-3.610;VQSLOD=0.8183;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:20,3:14:6.96:124,7,0	1/1:3,6:8:3.01:54,3,0	./.	./.	1/1:22,7:23:23.57:379,24,0	./.	1/1:8,1:2:3:25,3,0	0/0:28,0:8:0.66:0,1,32	0/1:17,7:15:18.97:19,0,47	0/1:27,5:24:99:405,0,175	0/1:7,5:8:0.03:0,0,0	1/1:18,8:16:6.01:108,6,0	1/1:10,7:9:5.93:71,6,0	1/1:21,7:20:2.97:54,3,0	1/1:23,7:19:9:162,9,0	1/1:9,4:6:6.02:97,6,0	1/1:7,6:7:15:222,15,0	0/1:6,1:5:30.70:31,0,130	0/1:11,3:6:95.60:96,0,108	1/1:16,11:18:8.96:161,9,0	1/1:9,5:11:3.01:54,3,0	1/1:25,7:18:11.96:186,12,0	1/1:7,1:3:3.01:54,3,0	./.	1/1:25,3:21:5.99:74,6,0	0/1:20,7:14:99:326,0,163	1/1:15,6:10:12.02:184,12,0	0/0:9,0:5:3.01:0,3,65
chr10	25073998	.	TAGAC	T	17251.43	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=5.677;DP=735;FS=1.019;HRun=0;HaplotypeScore=161.9827;InbreedingCoeff=0.9399;MQ=53.02;MQ0=8;MQRankSum=0.811;QD=27.74;ReadPosRankSum=7.910;VQSLOD=4.4001;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:31:62.90:0,63,1404	1/1:2,3:5:6.02:100,6,0	0/0:22,0:17:23.53:0,24,348	0/0:21,0:18:30.84:0,31,373	1/1:16,21:35:57.18:925,57,0	1/1:8,11:16:33.11:550,33,0	1/1:6,15:20:30.10:499,30,0	0/0:37,0:37:81.17:0,81,1600	1/1:6,26:31:51.14:849,51,0	1/1:19,19:36:84.28:1362,84,0	1/1:9,9:18:33.10:523,33,0	1/1:8,25:32:51.17:850,51,0	1/1:8,29:36:54.15:867,54,0	1/1:5,29:34:51.17:847,51,0	1/1:8,39:45:72.23:1199,72,0	1/1:9,24:30:75.23:1165,75,0	1/1:13,8:18:21.07:340,21,0	1/1:6,6:11:20.93:286,21,0	1/1:3,6:9:24.04:362,24,0	1/1:13,17:29:60.13:964,60,0	1/1:4,16:19:21.07:350,21,0	1/1:9,16:23:36.12:597,36,0	1/1:9,14:22:57.16:894,57,0	1/1:3,21:22:39.13:649,39,0	1/1:5,30:34:49.03:801,49,0	1/1:11,25:34:19.34:1375,19,0	1/1:11,16:23:45.13:721,45,0	1/1:2,3:5:6.48:177,6,0
chr10	25074350	.	T	TA	6870.79	PASS	AB=0.545;AC=37;AF=0.661;AN=56;BaseQRankSum=-10.809;DP=455;FS=4.209;HRun=9;HaplotypeScore=40.3857;InbreedingCoeff=0.8399;MQ=59.43;MQ0=5;MQRankSum=3.602;QD=24.80;ReadPosRankSum=1.504;VQSLOD=5.4804;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,22:27:31.11:571,31,0	1/1:1,5:6:12.03:133,12,0	0/0:15,0:8:14.99:0,15,130	0/0:13,0:7:5.99:0,6,52	1/1:7,16:23:40.92:478,41,0	1/1:1,13:14:36.10:398,36,0	1/1:1,11:12:12.42:281,12,0	0/0:42,0:41:99:0,105,910	1/1:1,16:17:42.11:465,42,0	1/1:2,15:16:45.12:498,45,0	1/1:1,15:16:42.07:451,42,0	1/1:3,12:15:7.34:306,7,0	1/1:1,12:13:30.08:332,30,0	1/1:2,15:17:45.12:493,45,0	0/0:14,0:13:35.99:0,36,312	1/1:1,13:14:36.10:398,36,0	0/0:31,0:31:74.98:0,75,651	0/0:8,0:8:17.99:0,18,156	0/0:23,0:20:47.97:0,48,414	0/0:26,0:26:68.98:0,69,599	0/0:5,0:5:11.99:0,12,104	1/1:0,1:1:3.01:33,3,0	0/1:1,5:6:7.99:148,0,8	1/1:1,6:7:15.04:166,15,0	1/1:4,13:17:16.06:402,16,0	1/1:5,22:27:63.14:680,63,0	1/1:3,20:23:31.31:571,31,0	1/1:2,2:4:6.02:66,6,0
chr10	25074956	.	AAT	A	528.41	PASS	AB=0.938;AC=12;AF=0.300;AN=40;BaseQRankSum=-2.022;DP=131;FS=11.933;HRun=0;HaplotypeScore=22.1553;InbreedingCoeff=0.3461;MQ=75.90;MQ0=1;MQRankSum=0.301;QD=11.49;ReadPosRankSum=3.515;VQSLOD=1.6066;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:4:9.03:0,9,148	./.	0/0:9,0:7:9.02:0,9,116	./.	0/0:2,0:2:2.50:0,2,9	./.	0/0:2,0:2:2.92:0,3,17	0/0:21,0:21:28.92:0,29,120	0/0:3,0:3:5.49:0,5,33	./.	0/0:2,0:2:3:0,3,25	./.	0/0:2,0:2:3:0,3,25	0/0:1,0:1:3:0,3,25	1/1:4,3:7:3.01:39,3,0	./.	1/1:3,14:17:27.09:347,27,0	1/1:0,4:4:12.04:154,12,0	0/1:6,1:7:32.59:33,0,44	1/1:1,0:1:3.01:38,3,0	1/1:1,4:5:3.01:39,3,0	0/0:1,0:1:2.80:0,3,13	0/0:2,0:2:3:0,3,25	./.	0/0:7,0:7:2.50:0,2,9	0/1:5,0:5:5.34:5,0,6	./.	0/0:3,0:3:4.44:0,4,13
chr10	25074967	.	AT	A	692.51	PASS	AC=16;AF=0.471;AN=34;BaseQRankSum=-1.987;DP=99;FS=5.557;HRun=2;HaplotypeScore=25.8873;InbreedingCoeff=0.5119;MQ=64.19;MQ0=3;MQRankSum=-1.131;QD=23.08;ReadPosRankSum=-1.399;VQSLOD=2.6528;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:3,0:3:9.01:0,9,113	./.	0/0:8,0:4:6.01:0,6,70	0/0:24,0:4:3.10:0,3,48	1/1:0,2:2:3.01:38,3,0	./.	1/1:1,0:1:2.98:21,3,0	1/1:11,5:16:44.73:521,45,0	1/1:0,1:1:3.01:38,3,0	./.	./.	./.	./.	./.	0/0:3,0:3:1.25:0,1,3	./.	0/0:17,0:17:17.23:0,17,110	0/0:5,0:5:7.99:0,8,52	0/0:3,0:3:4.26:0,4,45	0/0:1,0:1:0.89:0,1,2	0/0:4,0:4:1.25:0,1,3	1/1:1,0:1:3:25,3,0	./.	./.	1/1:0,3:3:3.01:38,3,0	1/1:1,2:3:6:52,6,0	./.	1/1:3,0:3:6.02:80,6,0
chr10	25074968	.	T	TA	778.58	PASS	AB=0.960;AC=17;AF=0.500;AN=34;BaseQRankSum=-3.002;DP=98;FS=5.557;HRun=1;HaplotypeScore=24.9509;InbreedingCoeff=0.5093;MQ=63.08;MQ0=3;MQRankSum=-1.826;QD=14.42;ReadPosRankSum=-1.684;VQSLOD=2.2171;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:3,0:3:9.01:0,9,107	./.	0/0:7,0:3:6.01:0,6,67	0/1:23,1:4:0.84:1,0,44	1/1:2,0:2:3.01:38,3,0	./.	1/1:1,0:1:2.98:21,3,0	1/1:6,10:16:45.15:621,45,0	1/1:1,0:1:3.01:38,3,0	./.	./.	./.	./.	./.	0/0:3,0:3:2.92:0,3,17	./.	0/0:17,0:17:32.34:0,32,236	0/0:5,0:5:14.71:0,15,108	0/0:3,0:3:5.93:0,6,59	0/0:1,0:1:0.89:0,1,2	0/0:4,0:4:2.92:0,3,17	1/1:1,0:1:3:25,3,0	./.	./.	1/1:3,0:3:3.01:38,3,0	1/1:3,0:3:5.80:40,6,0	./.	1/1:0,3:3:6.02:81,6,0
chr10	25074974	.	AT	A	397.92	PASS	AC=6;AF=0.273;AN=22;BaseQRankSum=-0.394;DP=95;FS=0.000;HRun=2;HaplotypeScore=32.3349;InbreedingCoeff=0.5459;MQ=64.43;MQ0=3;MQRankSum=-3.675;QD=22.11;ReadPosRankSum=-1.339;VQSLOD=2.9347;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:2,0:2:6.01:0,6,70	./.	0/0:9,0:2:3.01:0,3,40	0/0:33,0:6:6.49:0,6,67	./.	./.	./.	1/1:3,10:13:35.70:406,36,0	./.	./.	./.	./.	./.	./.	0/0:1,0:1:3.01:0,3,39	./.	0/0:17,0:17:39.13:0,39,567	0/0:5,0:5:15.05:0,15,217	0/0:3,0:3:5.61:0,6,55	./.	0/0:4,0:4:3.01:0,3,40	./.	./.	./.	./.	1/1:1,1:2:2.60:10,3,0	./.	1/1:2,1:3:6.02:80,6,0
chr10	25075003	.	TAAAA	T	904.69	PASS	AC=14;AF=0.583;AN=24;BaseQRankSum=-3.483;DP=116;FS=22.606;HRun=5;HaplotypeScore=49.9221;InbreedingCoeff=0.6722;MQ=88.43;MQ0=2;MQRankSum=0.364;QD=32.31;ReadPosRankSum=-1.617;VQSLOD=-0.4632;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	1/1:1,0:1:2.99:23,3,0	0/0:12,0:2:5.89:0,6,38	0/0:38,1:14:10.80:0,11,140	./.	./.	./.	1/1:1,17:18:50.92:661,51,0	./.	1/1:1,0:1:3.01:39,3,0	./.	1/1:1,0:1:3.01:49,3,0	./.	./.	./.	./.	0/0:19,0:19:48.15:0,48,1183	0/0:8,0:8:24.08:0,24,568	0/0:6,0:6:15.05:0,15,332	./.	./.	./.	./.	./.	1/1:2,0:2:3.01:51,3,0	1/1:3,0:3:9.03:127,9,0	1/1:2,0:2:6.02:72,6,0	./.
chr10	25075136	.	C	CCTGGGAT	2220.01	PASS	AC=28;AF=0.609;AN=46;BaseQRankSum=-0.705;DP=172;FS=2.626;HRun=0;HaplotypeScore=50.2422;InbreedingCoeff=0.6724;MQ=101.60;MQ0=0;MQRankSum=-4.196;QD=55.50;ReadPosRankSum=-1.309;VQSLOD=3.1903;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:63.22:0,63,1598	./.	0/0:15,0:15:22.40:0,22,517	0/0:13,0:13:24.77:0,25,672	1/1:0,2:2:3.01:119,3,0	1/1:4,0:4:9.03:239,9,0	1/1:1,6:9:18.06:716,18,0	0/0:19,0:19:57.10:0,57,1114	1/1:0,1:2:3.01:119,3,0	1/1:0,2:2:6.02:169,6,0	./.	1/1:4,0:4:3.01:36,3,0	1/1:3,0:3:6.02:152,6,0	1/1:3,0:3:6.01:103,6,0	0/0:1,0:1:3.01:0,3,78	./.	0/0:9,0:9:24.08:0,24,623	0/0:4,0:4:12:0,12,254	0/0:12,0:12:30.08:0,30,603	./.	0/0:37,0:37:99:0,105,2403	./.	1/1:1,0:1:3.01:39,3,0	1/1:3,0:3:5.93:110,6,0	1/1:0,1:1:3.01:119,3,0	1/1:1,1:2:6.02:239,6,0	1/1:0,1:2:3.01:114,3,0	1/1:2,0:2:6.02:115,6,0
chr10	25075138	.	T	TGG	596.53	PASS	AB=0.853;AC=21;AF=0.457;AN=46;BaseQRankSum=5.756;DP=176;FS=3.021;HRun=1;HaplotypeScore=37.3427;InbreedingCoeff=0.3210;MQ=100.14;MQ0=0;MQRankSum=-6.024;QD=15.30;ReadPosRankSum=0.712;VQSLOD=0.8110;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:63.21:0,63,959	./.	0/0:15,0:15:41.48:0,41,582	0/0:15,0:15:39.10:0,39,575	1/1:2,0:2:2.83:24,3,0	0/1:4,0:4:74.66:95,0,75	1/1:9,0:9:20.95:171,21,0	0/0:21,0:21:60.20:0,60,901	1/1:2,0:2:2.99:24,3,0	0/1:2,0:2:18.53:19,0,37	./.	0/1:2,2:4:29.80:30,0,38	0/1:1,2:3:38.14:52,0,38	1/1:2,0:2:6.01:79,6,0	0/0:1,0:1:3.01:0,3,46	./.	0/0:9,0:9:24.08:0,24,368	0/0:4,0:4:12:0,12,158	0/0:10,0:10:30.10:0,30,458	./.	0/0:38,0:38:99:0,105,1606	./.	0/0:1,0:1:3.01:0,3,46	0/1:3,0:3:17.94:18,0,40	1/1:1,0:1:2.99:24,3,0	1/1:2,0:2:5.99:49,6,0	1/1:3,0:3:3.01:55,3,0	1/1:2,0:2:6.02:115,6,0
chr10	25075237	.	A	AAT	531.07	PASS	AB=0.960;AC=19;AF=0.528;AN=36;BaseQRankSum=-3.003;DP=138;FS=16.448;HRun=0;HaplotypeScore=35.9567;InbreedingCoeff=0.4880;MQ=94.04;MQ0=4;MQRankSum=-0.531;QD=10.21;ReadPosRankSum=1.454;VQSLOD=1.5414;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:15.05:0,15,185	./.	./.	0/0:25,0:12:6.55:0,7,56	./.	1/1:0,4:3:12.04:195,12,0	./.	0/1:23,1:24:12.84:13,0,369	1/1:2,1:3:3.01:49,3,0	0/0:0,0:1:2.84:0,3,14	./.	1/1:2,1:3:3.01:49,3,0	1/1:2,0:2:3.01:47,3,0	1/1:3,1:4:3.01:49,3,0	0/0:2,0:2:3.01:0,3,36	1/1:0,2:2:3.01:49,3,0	0/0:12,0:12:33.05:0,33,362	0/0:8,0:9:20.90:0,21,236	0/0:6,0:6:9.03:0,9,110	./.	0/0:3,0:3:6.02:0,6,74	./.	./.	./.	./.	1/1:3,1:4:6.02:80,6,0	1/1:3,1:4:3.01:49,3,0	1/1:2,0:2:6.02:85,6,0
chr10	25075301	.	A	AAT	406.35	PASS	AC=8;AF=0.308;AN=26;BaseQRankSum=-0.749;DP=103;FS=5.074;HRun=0;HaplotypeScore=38.7668;InbreedingCoeff=0.5296;MQ=100.06;MQ0=4;MQRankSum=-1.756;QD=20.32;ReadPosRankSum=1.382;VQSLOD=3.2173;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:6:15.04:0,15,173	./.	0/0:14,1:8:2.42:0,2,12	0/0:25,0:9:5.92:0,6,46	./.	./.	./.	0/0:29,0:29:75.23:0,75,942	./.	./.	./.	./.	./.	0/0:1,0:1:0:0,0,0	0/0:1,0:1:3.01:0,3,39	./.	1/1:5,7:12:21.04:310,21,0	1/1:3,2:4:6.02:101,6,0	1/1:1,0:1:3.01:50,3,0	1/1:1,1:2:3.01:50,3,0	./.	./.	./.	./.	0/0:0,0:2:5.68:0,6,28	./.	0/0:0,0:1:2.84:0,3,14	0/0:0,0:2:5.68:0,6,28
chr10	25075348	.	T	TTA	805.29	PASS	AC=10;AF=0.357;AN=28;BaseQRankSum=-2.380;DP=74;FS=8.387;HRun=0;HaplotypeScore=40.8844;InbreedingCoeff=0.4643;MQ=106.91;MQ0=0;MQRankSum=0.766;QD=22.37;ReadPosRankSum=-2.490;VQSLOD=1.9914;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:3,0:3:9.03:0,9,109	./.	./.	0/0:16,0:12:3.07:0,3,30	./.	1/1:1,0:1:2.98:22,3,0	./.	1/1:12,14:27:48.16:775,48,0	1/1:0,0:1:3:26,3,0	./.	./.	./.	1/1:1,0:1:2.90:16,3,0	./.	0/0:0,0:1:2.84:0,3,14	./.	0/0:2,0:6:11.36:0,11,56	0/0:2,0:2:2.84:0,3,14	0/0:1,0:3:5.68:0,6,28	0/0:0,0:1:0:0,0,0	./.	./.	./.	./.	0/0:2,0:2:0:0,0,0	./.	0/0:1,0:1:2.68:0,3,11	1/1:4,0:6:3.57:71,4,0
chr10	25075393	.	A	AAT	5258.64	PASS	AC=48;AF=0.923;AN=52;BaseQRankSum=-1.837;DP=137;FS=11.775;HRun=0;HaplotypeScore=25.2857;InbreedingCoeff=0.4501;MQ=56.94;MQ0=0;MQRankSum=-0.094;QD=41.08;ReadPosRankSum=-1.527;VQSLOD=4.9474;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:6:15.05:0,15,193	./.	0/0:1,0:1:3.01:0,3,37	./.	1/1:0,1:1:3.01:51,3,0	1/1:1,5:6:12.35:249,12,0	1/1:0,1:1:3.01:51,3,0	1/1:4,25:29:78.25:1283,78,0	1/1:2,6:8:24.08:392,24,0	1/1:1,3:4:12.04:202,12,0	1/1:0,5:5:12.04:188,12,0	1/1:1,1:2:6.02:89,6,0	1/1:3,4:7:21.01:284,21,0	1/1:0,2:2:6.02:101,6,0	1/1:0,0:3:9:80,9,0	1/1:1,4:5:15.05:242,15,0	1/1:3,5:9:14.98:220,15,0	1/1:0,5:5:9.03:152,9,0	1/1:1,2:3:6.02:101,6,0	1/1:0,7:7:21.07:354,21,0	1/1:0,1:1:3.01:51,3,0	1/1:1,1:2:6.01:62,6,0	1/1:3,1:4:12:125,12,0	1/1:2,2:4:12.04:182,12,0	1/1:0,3:3:9.03:138,9,0	1/1:1,7:8:24.07:381,24,0	1/1:1,4:5:12.04:202,12,0	1/1:3,1:4:8.47:77,8,0
chr10	25075468	.	G	GA	4092.66	PASS	AB=0.573;AC=34;AF=0.607;AN=56;BaseQRankSum=-5.187;DP=235;FS=59.187;HRun=8;HaplotypeScore=26.6227;InbreedingCoeff=0.7987;MQ=67.37;MQ0=0;MQRankSum=0.542;QD=29.23;ReadPosRankSum=1.239;VQSLOD=-0.6407;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:24.01:0,24,220	1/1:0,3:3:9.03:104,9,0	0/0:2,0:2:5.79:0,6,38	0/0:4,0:4:5.99:0,6,55	1/1:0,9:9:27.08:312,27,0	1/1:0,11:12:32.93:361,33,0	1/1:0,7:7:18.05:208,18,0	0/0:28,0:28:69.02:0,69,631	1/1:3,7:10:24.06:267,24,0	1/1:3,6:11:26.74:270,27,0	1/1:1,7:8:18.01:193,18,0	1/1:0,8:8:24.07:277,24,0	1/1:2,7:10:27.07:304,27,0	1/1:1,6:7:21.05:233,21,0	0/0:7,0:7:21.01:0,21,192	1/1:0,8:8:24.07:277,24,0	0/0:10,0:10:24.01:0,24,220	0/0:8,0:8:18.01:0,18,164	0/0:8,0:8:21.01:0,21,192	0/0:12,0:12:30.01:0,30,275	0/0:7,0:7:20.99:0,21,186	1/1:0,6:6:18.01:193,18,0	0/1:2,7:9:3.40:218,0,3	1/1:0,4:4:9.03:104,9,0	1/1:2,6:8:21.06:242,21,0	1/1:1,10:11:30.09:342,30,0	0/1:2,5:7:9.41:155,0,9	1/1:0,2:2:3.01:35,3,0
chr10	25075872	.	G	GT	9765.54	PASS	AB=0.800;AC=36;AF=0.643;AN=56;BaseQRankSum=-11.409;DP=540;FS=3.871;HRun=9;HaplotypeScore=54.2437;InbreedingCoeff=0.8444;MQ=78.81;MQ0=0;MQRankSum=-1.040;QD=25.43;ReadPosRankSum=2.880;VQSLOD=5.6614;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:45.41:0,45,384	1/1:0,6:6:18.05:199,18,0	0/0:20,0:18:27:0,27,293	0/1:12,0:12:22.27:22,0,85	1/1:3,33:37:78.98:1052,79,0	1/1:2,20:23:63:678,63,0	1/1:3,11:15:26.86:279,27,0	0/0:34,0:35:79.99:0,80,682	1/1:2,14:16:39.11:431,39,0	1/1:3,22:25:63.17:695,63,0	1/1:1,20:22:59.95:629,60,0	1/1:1,11:12:24.06:266,24,0	1/1:4,19:23:28.20:538,28,0	1/1:7,23:30:74.94:809,75,0	0/0:20,0:20:50.97:0,51,443	1/1:1,18:19:22.07:472,22,0	0/0:11,0:11:29.95:0,30,253	0/0:11,0:11:29.95:0,30,253	0/0:7,0:7:21:0,21,182	0/0:22,0:22:59.99:0,60,521	0/0:10,0:10:26.98:0,27,234	1/1:0,18:18:42.07:449,42,0	1/1:2,20:22:45.12:498,45,0	1/1:2,15:17:45.12:498,45,0	1/1:1,15:16:39.11:431,39,0	1/1:3,26:30:57.96:837,58,0	1/1:4,31:35:81.22:896,81,0	0/1:2,4:6:14.02:88,0,14
chr10	25078531	.	T	TAAC	852.67	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=-4.636;DP=754;FS=9.250;HRun=0;HaplotypeScore=119.5987;InbreedingCoeff=0.6760;MQ=69.32;MQ0=1;MQRankSum=1.524;QD=12.01;ReadPosRankSum=-2.965;VQSLOD=2.1613;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,18:34:2.86:522,3,0	0/0:10,0:10:27.09:0,27,369	0/0:28,0:25:12.25:0,12,107	0/0:22,0:21:29.08:0,29,313	0/0:40,0:40:99:0,99,1272	0/0:43,0:43:78.20:0,78,1029	0/0:23,0:24:48.11:0,48,615	1/1:16,15:31:41.96:427,42,0	0/0:24,0:24:26.16:0,26,614	0/0:30,0:30:57.14:0,57,732	0/0:32,0:32:43.24:0,43,731	0/0:20,0:20:38.93:0,39,472	0/0:29,0:29:72.17:0,72,929	0/0:33,0:33:56.19:0,56,909	0/0:35,0:35:63.08:0,63,789	0/0:24,0:24:51.17:0,51,697	0/0:24,0:24:45.15:0,45,607	0/1:6,0:6:22.20:22,0,69	0/0:19,0:19:32.76:0,33,429	0/0:30,0:32:87.24:0,87,1152	0/0:24,0:24:29.72:0,30,372	0/0:26,0:26:64.86:0,65,798	0/0:23,0:23:39.04:0,39,509	0/0:32,0:31:57.16:0,57,745	0/0:23,0:23:38.84:0,39,469	0/0:36,0:36:72.20:0,72,963	0/0:37,0:37:84.23:0,84,1087	0/0:13,0:13:30.10:0,30,407
chr10	25078858	.	GT	G	2834.30	PASS	AB=0.958;AC=13;AF=0.232;AN=56;BaseQRankSum=-8.769;DP=550;FS=3.303;HRun=1;HaplotypeScore=94.3901;InbreedingCoeff=0.8676;MQ=70.46;MQ0=3;MQRankSum=-1.416;QD=24.65;ReadPosRankSum=-0.788;VQSLOD=3.4013;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,0:6:9.85:74,10,0	0/0:13,0:13:38.95:0,39,476	0/0:20,0:18:25.04:0,25,438	0/0:15,0:13:5.61:0,6,239	0/0:39,0:39:99:0,116,1393	0/0:24,0:24:69.06:0,69,889	0/0:18,0:18:53.92:0,54,645	0/0:21,0:21:62.85:0,63,756	0/0:12,0:12:35.77:0,36,417	0/0:31,0:31:92.80:0,93,1077	0/0:28,0:28:81.07:0,81,1024	0/0:17,0:17:45.08:0,45,575	0/0:16,0:16:44.62:0,45,541	0/0:23,0:23:68.68:0,69,826	0/1:22,1:23:61.55:74,0,62	0/0:19,0:19:56.98:0,57,683	1/1:0,22:22:63.21:872,63,0	1/1:1,12:13:30.10:407,30,0	1/1:2,17:16:48.10:606,48,0	1/1:2,18:18:50.75:621,51,0	1/1:0,12:11:27.09:368,27,0	0/0:20,0:20:60.04:0,60,753	0/0:15,0:15:45.15:0,45,590	0/0:14,0:14:41.84:0,42,478	0/0:24,0:24:71.91:0,72,859	0/0:23,0:23:68.58:0,69,813	0/0:36,0:36:99:0,108,1333	0/0:6,0:6:18.06:0,18,240
chr10	25080533	.	GA	G	1109.57	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.782;DP=588;FS=1.505;HRun=1;HaplotypeScore=55.7896;InbreedingCoeff=0.9937;MQ=82.71;MQ0=0;MQRankSum=-0.337;QD=35.79;ReadPosRankSum=-4.129;VQSLOD=2.2786;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:66.22:0,66,1051	0/0:9,0:9:27.09:0,27,428	0/0:20,0:20:57.61:0,58,826	0/0:12,0:12:33.08:0,33,485	0/0:28,0:28:81.26:0,81,1256	0/0:24,0:24:72.25:0,72,1151	0/0:21,0:21:63.21:0,63,1007	1/1:0,31:31:90.25:1204,90,0	0/0:14,0:14:42.13:0,42,648	0/0:16,0:16:48.16:0,48,768	0/0:24,0:24:69.22:0,69,1079	0/0:19,0:19:57.19:0,57,911	0/0:28,0:28:84.23:0,84,1287	0/0:21,0:21:63.21:0,63,1005	0/0:19,0:19:57.18:0,57,886	0/0:30,0:30:90.31:0,90,1439	0/0:31,0:31:90.28:0,90,1439	0/0:10,0:10:27.09:0,27,431	0/0:20,0:20:57.19:0,57,907	0/0:25,0:25:72.23:0,72,1128	0/0:17,0:17:51.14:0,51,788	0/0:26,0:26:78.24:0,78,1199	0/0:26,0:26:72.25:0,72,1150	0/0:17,0:17:51.13:0,51,787	0/0:17,0:17:48.16:0,48,765	0/0:22,0:22:66.21:0,66,1031	0/0:32,0:32:96.29:0,96,1485	0/0:7,0:7:21.07:0,21,335
chr10	25082476	.	T	TA	10731.05	PASS	AB=0.587;AC=47;AF=0.839;AN=56;BaseQRankSum=-7.894;DP=573;FS=2.446;HRun=10;HaplotypeScore=62.3503;InbreedingCoeff=0.5790;MQ=84.99;MQ0=0;MQRankSum=-2.636;QD=21.68;ReadPosRankSum=0.872;VQSLOD=5.8687;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,1:36:41.53:0,42,527	0/1:1,9:9:0.57:200,0,1	0/0:26,1:27:33.38:0,33,306	0/0:14,0:14:6.31:0,6,51	1/1:2,24:28:71.57:635,72,0	1/1:3,11:14:2.43:231,2,0	1/1:2,14:16:36.09:384,36,0	1/1:6,15:21:23.40:425,23,0	1/1:3,17:20:26.61:446,27,0	1/1:6,16:22:20.62:406,21,0	1/1:4,22:25:41.27:582,41,0	1/1:2,13:16:36.04:371,36,0	1/1:1,11:12:27.07:288,27,0	1/1:2,18:20:23.48:455,23,0	1/1:3,22:26:57.14:606,57,0	1/1:2,15:17:42.11:448,42,0	1/1:7,32:39:21.69:801,22,0	1/1:0,14:14:42.11:448,42,0	0/1:6,7:13:22.27:178,0,22	1/1:5,19:25:54.05:550,54,0	0/1:7,17:24:4.13:371,0,4	1/1:1,17:18:36.01:359,36,0	1/1:2,17:19:30.08:320,30,0	1/1:2,22:25:66:686,66,0	1/1:5,15:19:11.45:327,11,0	1/1:0,21:22:62.97:638,63,0	1/1:5,21:25:48.12:511,48,0	1/1:0,2:2:6.02:64,6,0
chr10	25082709	.	TACACAC	T	5144.73	PASS	AB=0.810;AC=39;AF=0.848;AN=46;BaseQRankSum=-1.922;DP=518;FS=2.875;HRun=0;HaplotypeScore=137.6356;InbreedingCoeff=0.2979;MQ=57.69;MQ0=20;MQRankSum=1.853;QD=13.23;ReadPosRankSum=1.491;VQSLOD=3.6763;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:17:3.41:0,3,58	./.	./.	./.	./.	1/1:15,2:18:30.10:606,30,0	0/0:13,6:19:3.01:0,3,32	0/1:18,0:15:0:0,0,0	1/1:7,0:9:12.04:242,12,0	1/1:13,7:20:27.09:547,27,0	1/1:9,5:13:0.89:2,1,0	0/1:12,4:19:37.18:401,0,37	1/1:9,3:14:24.97:427,25,0	1/1:12,12:24:3.01:61,3,0	1/1:12,0:18:3.01:38,3,0	1/1:11,3:15:18.03:296,18,0	1/1:16,0:14:6.02:84,6,0	1/1:13,0:10:3.01:42,3,0	1/1:16,5:21:15.01:215,15,0	1/1:23,1:23:9.91:184,10,0	1/1:21,1:23:6.02:109,6,0	1/1:10,1:12:15.50:266,16,0	./.	1/1:26,3:29:9.03:167,9,0	1/1:12,4:16:19.31:367,19,0	1/1:15,12:27:36.12:694,36,0	1/1:16,3:18:18.06:347,18,0	0/1:6,4:10:33.88:51,0,34
chr10	25082737	.	CACACACACACACACAG	C	741.37	PASS	AB=0.960;AC=6;AF=0.111;AN=54;BaseQRankSum=-2.525;DP=618;FS=11.164;HRun=0;HaplotypeScore=224.6650;InbreedingCoeff=0.1205;MQ=42.52;MQ0=50;MQRankSum=-0.809;QD=5.84;ReadPosRankSum=-7.302;VQSLOD=-0.6170;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:14:7.37:0,7,136	0/0:11,0:9:4.23:0,4,26	0/0:4,0:2:3.01:0,3,71	./.	0/0:20,0:18:0.24:0,0,51	0/0:29,0:25:14.55:0,15,761	0/0:20,0:20:9.50:0,10,201	1/1:16,0:14:29.59:197,30,0	0/0:19,0:18:18.04:0,18,328	0/0:33,0:28:27.13:0,27,1414	0/0:15,0:13:6.87:0,7,217	0/0:35,0:32:43.03:0,43,1076	0/0:22,0:21:18.78:0,19,489	0/0:30,0:27:12.32:0,12,319	0/1:30,0:28:33.18:135,0,33	0/0:22,0:20:27.02:0,27,503	0/1:20,3:18:39.83:383,0,40	0/1:18,1:15:98.85:139,0,99	0/0:22,0:19:18.14:0,18,604	0/0:18,0:16:17.19:0,17,427	0/1:37,0:30:12.52:13,0,108	0/0:20,0:18:11.42:0,11,369	0/0:19,0:16:9.03:0,9,210	0/0:43,0:38:9.17:0,9,272	0/0:23,0:19:18.94:0,19,548	0/0:35,0:32:44.75:0,45,1521	0/0:17,0:15:21.53:0,22,401	0/0:7,0:7:12.02:0,12,282
chr10	25082763	.	GAGAC	G	4421.09	PASS	AB=0.823;AC=37;AF=0.712;AN=52;BaseQRankSum=-8.077;DP=658;FS=7.654;HRun=0;HaplotypeScore=158.5304;InbreedingCoeff=0.4690;MQ=42.98;MQ0=58;MQRankSum=5.300;QD=8.55;ReadPosRankSum=-0.395;VQSLOD=3.6482;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:22:1.33:0,1,67	1/1:8,2:8:3.01:48,3,0	./.	./.	1/1:22,3:21:15:189,15,0	1/1:20,3:20:16.80:231,17,0	1/1:20,0:19:21.02:242,21,0	0/0:27,0:22:35.64:0,36,274	1/1:8,13:20:4.08:51,4,0	1/1:21,19:34:15.11:672,15,0	1/1:15,0:14:18:216,18,0	0/1:16,18:31:31.21:88,0,31	1/1:26,2:27:42.05:546,42,0	1/1:24,2:23:20.52:227,21,0	0/0:27,0:24:5.55:0,6,100	1/1:9,15:22:2.51:48,3,0	0/0:30,0:24:33.56:0,34,472	0/0:21,0:17:19.62:0,20,568	1/1:18,2:13:17.98:211,18,0	1/1:5,9:12:5.05:25,5,0	0/1:39,4:34:94.73:322,0,95	1/1:21,1:20:24.51:316,25,0	1/1:17,2:16:5.99:50,6,0	1/1:22,28:46:9.03:145,9,0	1/1:10,15:22:9.03:146,9,0	0/1:32,4:32:20.84:504,0,21	1/1:6,16:20:8.85:144,9,0	0/0:2,0:2:3.01:0,3,64
chr10	25082765	.	GAC	G	2346.99	PASS	AB=0.991;AC=29;AF=0.558;AN=52;BaseQRankSum=-5.570;DP=661;FS=22.840;HRun=0;HaplotypeScore=155.1464;InbreedingCoeff=-0.1299;MQ=42.77;MQ0=58;MQRankSum=5.509;QD=4.55;ReadPosRankSum=1.429;VQSLOD=1.6983;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:21:2.24:0,2,50	1/1:10,0:8:3:25,3,0	./.	./.	1/1:26,0:22:14.96:122,15,0	0/1:22,0:19:9.65:142,0,10	1/1:20,0:19:20.64:169,21,0	0/0:29,0:24:26.58:0,27,172	1/1:21,0:20:4.22:27,4,0	0/1:40,0:34:99:338,0,135	0/1:15,0:14:12.35:123,0,12	0/1:33,1:31:24.90:25,0,158	0/1:28,0:27:59.59:295,0,60	1/1:25,0:22:13.05:138,13,0	0/0:25,4:26:5.70:0,6,50	0/1:23,0:21:16.43:16,0,21	0/0:32,0:26:36.75:0,37,332	0/0:22,0:18:14.59:0,15,323	0/1:20,0:13:37.58:155,0,38	1/1:14,0:12:5.05:25,5,0	0/1:42,1:34:59.84:157,0,60	1/1:22,0:20:5.39:184,5,0	1/1:19,0:16:8.99:75,9,0	0/1:50,0:46:54.71:55,0,59	0/1:25,0:22:18:57,0,18	0/1:33,1:30:99:297,0,153	0/1:21,1:20:7.90:66,0,8	0/1:3,0:3:20.14:20,0,35
chr10	25082789	.	G	GAC	1462.15	PASS	AB=0.864;AC=11;AF=0.196;AN=56;BaseQRankSum=3.049;DP=700;FS=1.243;HRun=0;HaplotypeScore=130.1759;InbreedingCoeff=0.2910;MQ=51.10;MQ0=52;MQRankSum=-4.313;QD=6.56;ReadPosRankSum=2.072;VQSLOD=3.5212;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:19,16:23:27.67:99,0,28	0/0:9,0:7:9:0,9,105	1/1:14,0:2:2.50:9,2,0	0/0:21,0:10:15.04:0,15,192	0/0:20,0:17:1.22:0,1,309	0/0:19,0:18:23.50:0,23,256	0/0:17,0:16:27.01:0,27,314	0/0:37,0:32:52.37:0,52,532	0/0:22,0:22:17.82:0,18,211	0/1:32,0:28:82.93:83,0,447	0/0:15,0:14:29.98:0,30,338	0/0:34,0:33:36.05:0,36,464	0/1:24,0:23:3.21:3,0,445	0/0:22,0:21:30.01:0,30,358	1/1:13,11:21:8.84:155,9,0	0/0:23,0:22:23.89:0,24,302	1/1:15,17:24:5.31:739,5,0	0/1:13,17:23:99:414,0,150	0/0:29,0:21:40.30:0,40,577	0/0:19,0:18:30.09:0,30,428	0/0:46,0:39:62.72:0,63,729	0/0:16,0:14:27.40:0,27,269	0/0:18,0:16:24.05:0,24,298	0/0:50,0:46:32.91:0,33,404	0/0:23,0:21:17.96:0,18,191	0/1:31,0:30:99:101,0,661	0/0:28,0:27:33.29:0,33,386	0/0:7,0:6:9.03:0,9,117
chr10	25082820	.	AG	A	164.64	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.682;DP=733;FS=1.087;HRun=6;HaplotypeScore=121.4212;InbreedingCoeff=0.8694;MQ=68.58;MQ0=16;MQRankSum=-0.441;QD=6.86;ReadPosRankSum=-1.739;VQSLOD=-0.0461;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:23:4.71:0,5,257	0/0:8,0:8:21.07:0,21,276	0/0:41,0:24:51.95:0,52,645	0/0:54,0:36:62.79:0,63,706	0/0:13,0:13:33.57:0,34,420	0/0:18,0:18:40.01:0,40,515	0/0:23,0:23:60.14:0,60,789	0/0:26,0:25:50.37:0,50,686	0/0:20,0:20:32.50:0,33,400	0/0:21,0:21:51.17:0,51,670	0/0:17,0:17:48.12:0,48,584	0/0:29,0:29:57.18:0,57,748	0/0:25,1:25:69.17:0,69,854	0/0:31,0:31:90.25:0,90,1164	1/1:4,20:23:23.57:258,24,0	0/0:26,0:26:45.60:0,46,565	0/0:29,0:23:63.20:0,63,826	0/0:29,0:24:41.24:0,41,586	0/0:22,0:22:66.21:0,66,864	0/0:21,0:21:49.36:0,49,615	0/0:49,0:49:99:0,99,1255	0/0:23,0:23:63.19:0,63,814	0/0:17,0:17:45.11:0,45,552	0/0:52,0:52:66.06:0,66,831	0/0:18,0:18:24.07:0,24,303	0/0:33,0:33:73.10:0,73,987	0/0:27,0:27:45.06:0,45,585	0/0:6,0:6:18.06:0,18,237
chr10	25083311	.	CA	C	605.88	PASS	AB=0.880;AC=12;AF=0.214;AN=56;BaseQRankSum=8.299;DP=604;FS=0.000;HRun=14;HaplotypeScore=70.4766;InbreedingCoeff=0.3856;MQ=70.06;MQ0=0;MQRankSum=-0.182;QD=3.33;ReadPosRankSum=1.752;VQSLOD=-0.0940;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,18:22:22.21:265,22,0	0/0:6,0:6:15.01:0,15,136	0/0:12,0:12:20.45:0,20,144	0/1:12,0:11:2.07:2,0,45	0/0:31,2:36:39.57:0,40,598	0/1:22,3:27:6.38:6,0,427	0/1:15,4:19:37.34:37,0,247	0/0:32,3:37:17.25:0,17,549	0/1:13,2:15:2.17:2,0,251	0/0:18,3:22:0.66:0,1,268	0/0:15,0:15:32.92:0,33,287	0/0:17,0:17:42.01:0,42,375	0/0:31,0:33:71.63:0,72,608	0/0:19,1:24:9.56:0,10,338	1/1:2,0:26:40.73:119,41,0	0/0:17,0:19:38.87:0,39,345	0/0:2,0:14:28.72:0,29,166	0/0:7,0:15:29.05:0,29,194	1/1:14,16:32:28.65:314,29,0	0/0:17,1:21:7.60:0,8,254	0/0:16,0:17:28.67:0,29,232	0/0:16,0:16:38.99:0,39,343	0/0:24,1:27:18.82:0,19,422	0/1:17,2:21:9.81:10,0,260	0/0:25,1:25:33.45:0,33,443	0/0:28,4:33:57.27:0,57,635	0/0:25,3:32:6.79:0,7,439	0/1:7,1:8:4.69:5,0,93
chr10	25084283	.	CA	C	452.50	PASS	AB=0.900;AC=3;AF=0.054;AN=56;BaseQRankSum=4.441;DP=498;FS=9.338;HRun=10;HaplotypeScore=61.1673;InbreedingCoeff=0.7063;MQ=74.44;MQ0=0;MQRankSum=-1.320;QD=10.06;ReadPosRankSum=1.298;VQSLOD=1.7921;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,25:27:62.97:547,63,0	0/0:5,0:5:12.03:0,12,133	0/0:17,0:18:26.37:0,26,213	0/1:15,1:18:2.15:2,0,158	0/0:14,0:14:33.09:0,33,365	0/0:26,0:26:66.17:0,66,723	0/0:17,1:18:19.07:0,19,438	0/0:6,0:26:51.89:0,52,307	0/0:16,1:17:22.08:0,22,472	0/0:20,0:21:41.18:0,41,492	0/0:15,0:15:45.12:0,45,498	0/0:11,0:11:30.08:0,30,332	0/0:18,1:20:30.93:0,31,552	0/0:13,0:14:35.93:0,36,379	0/0:18,0:18:51.14:0,51,564	0/0:21,0:22:50.97:0,51,545	0/0:5,0:15:31.76:0,32,173	0/0:0,0:11:14.34:0,14,72	0/0:13,0:14:35.92:0,36,371	0/0:26,0:26:37.25:0,37,638	0/0:18,0:18:42.11:0,42,465	0/0:19,0:21:62.96:0,63,664	0/0:8,0:8:15.04:0,15,166	0/0:18,0:18:42.11:0,42,465	0/0:21,0:21:57.15:0,57,631	0/0:27,1:28:49.14:0,49,770	0/0:18,0:18:45.11:0,45,490	0/0:10,0:10:24.05:0,24,257
chr10	25084348	.	TAC	T	317.03	PASS	AB=0.964;AC=16;AF=0.308;AN=52;BaseQRankSum=2.983;DP=407;FS=0.000;HRun=0;HaplotypeScore=69.3623;InbreedingCoeff=-0.3773;MQ=66.66;MQ0=14;MQRankSum=0.518;QD=1.39;ReadPosRankSum=0.621;VQSLOD=1.0977;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:20:4.74:17,5,0	0/0:2,0:1:3.01:0,3,45	./.	./.	0/0:11,0:11:5.59:0,6,159	0/1:18,1:18:53.84:54,0,170	0/1:24,0:24:18.56:19,0,243	0/1:26,2:28:26.07:55,0,26	0/0:8,0:7:3.01:0,3,43	0/1:14,0:14:16.15:16,0,156	0/1:9,1:10:19.65:20,0,42	0/1:8,1:9:24.64:25,0,152	0/0:11,0:11:9.01:0,9,114	0/1:9,0:9:24.16:24,0,60	0/0:15,0:15:6.49:0,6,76	0/0:10,0:10:3.01:0,3,42	0/0:15,1:16:4.30:0,4,66	0/1:10,2:9:23.40:48,0,23	0/0:8,0:8:9.02:0,9,117	0/1:14,0:13:24.24:24,0,81	0/0:21,0:18:15.04:0,15,193	0/0:15,0:15:9.03:0,9,123	0/1:8,0:8:6.32:6,0,183	0/1:14,0:14:17.58:18,0,74	0/0:18,0:16:10.14:0,10,108	0/1:18,1:19:99:102,0,197	0/1:17,0:17:24.64:25,0,80	0/1:11,0:11:9.59:10,0,20
chr10	25084389	.	ACG	A	2700.64	PASS	AB=0.965;AC=24;AF=0.462;AN=52;BaseQRankSum=2.185;DP=444;FS=1.969;HRun=0;HaplotypeScore=76.2436;InbreedingCoeff=-0.0099;MQ=48.12;MQ0=23;MQRankSum=-1.728;QD=8.31;ReadPosRankSum=-0.801;VQSLOD=3.0967;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:22,11:32:38.38:492,38,0	0/0:4,0:3:3.01:0,3,53	0/0:16,0:3:9.03:0,9,167	./.	0/1:16,1:15:42.02:42,0,88	0/0:22,0:22:1.85:0,2,73	0/1:28,0:28:1.74:2,0,188	1/1:6,21:26:60.88:746,61,0	./.	0/1:14,0:14:89.89:122,0,90	1/1:10,1:11:5.85:58,6,0	0/1:11,1:12:30.81:31,0,175	0/1:9,0:9:20.56:21,0,48	0/0:10,0:10:3:0,3,27	0/0:9,0:9:10.11:0,10,92	0/0:8,0:8:1.55:0,2,4	1/1:12,9:20:42.01:572,42,0	1/1:10,3:8:14.92:147,15,0	0/1:8,0:6:21.04:21,0,62	0/0:14,0:13:7.60:0,8,40	0/1:23,0:21:41.74:42,0,215	0/1:19,0:19:0.01:0,0,89	0/1:6,3:8:40.22:40,0,83	0/1:21,0:20:7.98:8,0,40	0/1:19,0:16:52.10:66,0,52	0/1:22,1:23:52.89:335,0,53	0/0:12,0:12:6.89:0,7,53	1/1:18,0:17:16.87:116,17,0
chr10	25084391	.	G	GCA	2752.53	PASS	AB=0.723;AC=33;AF=0.635;AN=52;BaseQRankSum=-0.181;DP=455;FS=0.816;HRun=0;HaplotypeScore=77.7785;InbreedingCoeff=0.0487;MQ=48.91;MQ0=21;MQRankSum=-1.122;QD=7.17;ReadPosRankSum=-1.187;VQSLOD=3.0868;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:32,0:31:26.37:203,26,0	0/0:5,0:4:3.01:0,3,31	0/0:17,0:3:9.03:0,9,111	./.	0/1:9,6:13:24.88:123,0,25	0/1:8,12:21:8.84:9,0,29	0/1:12,16:29:15.49:15,0,65	1/1:25,0:24:24.95:349,25,0	./.	1/1:7,8:15:22.13:295,22,0	0/1:3,8:11:0:0,0,0	0/1:12,0:12:5.20:189,0,5	1/1:2,10:12:6.02:96,6,0	1/1:1,10:11:3.01:49,3,0	0/0:9,0:10:9.01:0,9,109	0/1:1,7:9:0.10:0,0,0	0/1:22,0:21:15.24:120,0,15	1/1:10,0:7:3.59:9,4,0	1/1:5,5:8:12.02:158,12,0	0/0:5,9:13:2.22:0,2,7	0/1:12,13:23:99:124,0,126	0/1:5,14:19:30.90:43,0,31	0/1:9,0:8:24.17:112,0,24	1/1:6,15:21:6.02:89,6,0	0/1:9,11:17:27.75:59,0,28	1/1:9,16:25:55:671,55,0	1/1:2,10:12:6.02:98,6,0	1/1:6,12:17:9.65:93,10,0
chr10	25084430	.	A	AAG	982.71	PASS	AB=1.000;AC=5;AF=0.093;AN=54;BaseQRankSum=-2.456;DP=419;FS=27.466;HRun=0;HaplotypeScore=71.6099;InbreedingCoeff=0.6437;MQ=60.05;MQ0=6;MQRankSum=-0.481;QD=15.60;ReadPosRankSum=-1.598;VQSLOD=1.5301;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:56.18:0,56,426	0/0:8,0:8:15.04:0,15,194	0/1:27,0:13:4.60:5,0,264	0/0:27,0:15:32.04:0,32,455	0/0:19,0:18:50.93:0,51,572	0/0:24,0:24:33.02:0,33,390	0/0:22,0:22:38.88:0,39,491	1/1:17,6:23:53.09:733,53,0	0/0:8,0:8:6.02:0,6,81	0/0:16,0:16:28.32:0,28,341	0/0:9,0:9:18.02:0,18,219	0/0:7,0:7:15.05:0,15,201	0/0:15,0:15:21.05:0,21,263	0/0:12,0:12:18.01:0,18,209	1/1:2,11:13:24.03:367,24,0	0/0:9,0:9:3.51:0,4,77	0/0:23,0:23:42.82:0,43,184	0/0:5,0:5:11.10:0,11,35	0/0:13,0:13:33.57:0,34,426	0/0:4,0:4:2.77:0,3,20	0/0:18,0:18:26.80:0,27,319	0/0:14,0:14:19.90:0,20,218	0/0:7,0:7:18.02:0,18,216	0/0:13,0:12:12.03:0,12,144	0/0:17,0:15:30.04:0,30,355	0/0:17,0:17:41.45:0,41,439	0/0:14,0:14:24.84:0,25,324	./.
chr10	25084435	.	A	AG	663.96	PASS	AB=1.000;AC=6;AF=0.107;AN=56;BaseQRankSum=2.982;DP=439;FS=11.835;HRun=8;HaplotypeScore=65.3839;InbreedingCoeff=0.4990;MQ=63.13;MQ0=4;MQRankSum=-1.292;QD=8.97;ReadPosRankSum=1.369;VQSLOD=0.6180;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:26:23.67:0,24,74	0/0:8,0:8:21.01:0,21,191	0/0:25,0:14:26.29:0,26,228	0/0:29,0:17:19.76:0,20,326	0/0:20,0:19:48.01:0,48,434	0/0:23,0:23:33.01:0,33,302	0/0:25,0:25:48:0,48,433	0/1:28,0:28:64.57:79,0,65	0/0:9,0:9:6:0,6,55	0/0:13,0:13:33.02:0,33,302	0/0:12,0:12:24:0,24,219	0/0:6,0:6:15.01:0,15,137	0/0:15,0:15:21:0,21,192	0/0:11,0:11:15:0,15,137	0/1:15,0:15:12.05:34,0,12	0/0:9,0:9:6:0,6,55	1/1:6,17:23:45.13:512,45,0	1/1:1,7:8:15.04:173,15,0	0/0:14,0:14:33.01:0,33,302	0/0:7,0:7:8.79:0,9,82	0/0:18,0:18:23.98:0,24,214	0/0:17,0:17:27:0,27,247	0/0:8,0:8:17.99:0,18,160	0/0:13,0:12:8.96:0,9,74	0/0:16,0:15:24.01:0,24,219	0/0:16,0:16:24.01:0,24,219	0/0:17,0:17:10.64:0,11,275	0/0:8,0:8:2.99:0,3,27
chr10	25087264	.	AT	A	425.53	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.040;DP=584;FS=0.000;HRun=7;HaplotypeScore=53.6867;InbreedingCoeff=0.9788;MQ=72.64;MQ0=0;MQRankSum=-0.422;QD=25.03;ReadPosRankSum=2.519;VQSLOD=3.9104;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:57.18:0,57,717	0/0:11,0:11:30.10:0,30,377	0/0:14,0:14:36.09:0,36,414	0/0:6,0:6:15.05:0,15,189	0/0:29,0:29:75.24:0,75,943	0/0:29,0:29:72.22:0,72,893	0/0:16,0:16:42.13:0,42,528	0/0:35,0:35:87.21:0,87,1072	0/0:20,0:20:51.16:0,51,642	0/0:32,0:32:84.26:0,84,1038	0/0:29,0:29:81.26:0,81,1019	0/0:23,0:23:63.20:0,63,793	0/0:28,0:28:75.20:0,75,914	0/0:20,0:20:60.19:0,60,755	1/1:0,17:17:51.12:520,51,0	0/0:16,0:16:42.13:0,42,527	0/0:11,0:11:30.10:0,30,376	0/0:16,0:16:45.14:0,45,561	0/0:16,0:16:45.14:0,45,555	0/0:39,0:39:99:0,99,1245	0/0:8,0:8:21.07:0,21,264	0/0:20,0:20:57.18:0,57,717	0/0:24,0:24:72.23:0,72,904	0/0:13,0:13:36.12:0,36,453	0/0:23,0:23:63.20:0,63,793	0/0:24,0:24:66.21:0,66,830	0/0:27,0:26:75.24:0,75,943	0/0:18,0:18:30.10:0,30,377
chr10	25088792	.	G	GA	463.44	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-2.859;DP=470;FS=0.000;HRun=9;HaplotypeScore=72.3016;InbreedingCoeff=0.6551;MQ=58.32;MQ0=0;MQRankSum=-0.263;QD=19.31;ReadPosRankSum=-0.514;VQSLOD=3.5530;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,19:24:31.06:558,31,0	0/0:12,0:12:32.99:0,33,286	0/0:11,0:11:23.98:0,24,205	0/0:13,0:13:26.99:0,27,234	0/0:18,0:18:44.98:0,45,390	0/0:15,1:16:3.63:0,4,254	0/0:10,0:10:20.99:0,21,182	0/0:11,0:11:26.97:0,27,232	0/0:18,0:18:35.75:0,36,304	0/0:26,1:27:39.25:0,39,558	0/0:22,0:22:38.82:0,39,336	0/0:18,0:18:38.97:0,39,337	0/0:17,0:17:44.98:0,45,389	0/0:21,0:21:47.06:0,47,412	0/0:13,0:13:29.99:0,30,259	0/0:12,0:12:29.98:0,30,260	0/0:19,0:19:44.99:0,45,390	0/0:22,0:22:53.98:0,54,468	0/0:15,0:16:41.03:0,41,345	0/0:25,0:25:35.73:0,36,513	0/0:6,0:6:8.99:0,9,78	0/0:23,0:23:44.90:0,45,386	0/0:21,0:21:50.92:0,51,432	0/0:13,0:13:32.90:0,33,277	0/0:21,0:21:56.89:0,57,485	0/0:23,0:23:62.80:0,63,531	0/0:15,0:15:5.98:0,6,279	0/0:3,0:3:2.99:0,3,26
chr10	25094156	.	ACGCG	A	314.62	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.237;DP=671;FS=8.263;HRun=0;HaplotypeScore=167.5933;InbreedingCoeff=0.6862;MQ=77.48;MQ0=7;MQRankSum=-1.710;QD=12.10;ReadPosRankSum=-5.213;VQSLOD=1.0678;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:34.13:0,34,744	0/0:7,0:7:12.04:0,12,145	0/0:34,0:25:33.27:0,33,602	0/0:27,0:22:31.19:0,31,366	0/0:27,0:26:60.12:0,60,773	0/0:21,0:21:48.15:0,48,598	0/0:33,0:33:39.06:0,39,767	1/1:10,16:26:37.23:409,37,0	0/0:24,0:24:51.16:0,51,654	0/0:20,0:20:57.08:0,57,714	0/0:19,0:19:25.41:0,25,560	0/0:28,0:28:50.26:0,50,804	0/0:21,0:21:48.14:0,48,605	0/0:25,0:25:69.18:0,69,870	0/0:22,0:22:60.15:0,60,742	0/0:20,0:20:35.31:0,35,522	0/0:45,0:45:1.27:0,1,1600	0/0:16,0:16:17.13:0,17,517	0/0:13,0:12:23.90:0,24,273	0/0:23,0:23:45.14:0,45,611	0/0:32,0:31:51.57:0,52,753	0/0:13,0:13:39.11:0,39,530	0/0:27,0:27:50.67:0,51,603	0/0:28,0:28:57.18:0,57,741	0/0:31,0:31:51.97:0,52,831	0/0:28,0:28:74.85:0,75,865	0/0:28,0:27:68.97:0,69,817	0/0:3,0:3:3.01:0,3,35
chr10	25094164	.	GCA	G	11112.50	PASS	AB=0.981;AC=48;AF=0.857;AN=56;BaseQRankSum=-9.034;DP=693;FS=0.000;HRun=0;HaplotypeScore=115.3235;InbreedingCoeff=0.6780;MQ=70.07;MQ0=9;MQRankSum=3.299;QD=18.87;ReadPosRankSum=5.357;VQSLOD=4.7568;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:18,12:33:51.13:505,51,0	1/1:0,11:11:12.04:148,12,0	0/0:40,0:25:31.65:0,32,240	0/1:25,0:19:19.97:20,0,123	1/1:7,20:26:33.10:406,33,0	1/1:1,19:20:45.14:553,45,0	1/1:7,22:30:43.45:473,43,0	0/1:24,0:24:10.69:11,0,86	1/1:1,24:25:48.15:590,48,0	1/1:6,15:21:36.14:527,36,0	1/1:6,14:21:23.91:272,24,0	1/1:7,17:26:38.77:434,39,0	1/1:3,23:26:39.12:479,39,0	1/1:5,22:27:51.16:627,51,0	1/1:7,17:24:60.07:689,60,0	1/1:4,17:22:29.92:346,30,0	0/0:46,0:46:99:0,114,1654	0/0:18,0:18:37.58:0,38,463	1/1:3,9:11:26.92:273,27,0	1/1:2,18:20:36.11:443,36,0	1/1:3,32:35:54:641,54,0	1/1:5,10:15:21.07:258,21,0	1/1:1,26:27:47.98:589,48,0	1/1:3,25:28:48.15:590,48,0	1/1:3,29:33:62.82:728,63,0	1/1:4,24:28:71.97:771,72,0	1/1:3,22:24:57.18:701,57,0	1/1:0,2:2:3.01:37,3,0
chr10	25094218	.	GA	G	1255.25	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=4.359;DP=642;FS=0.562;HRun=7;HaplotypeScore=92.1622;InbreedingCoeff=0.9975;MQ=85.90;MQ0=3;MQRankSum=-4.016;QD=22.42;ReadPosRankSum=2.121;VQSLOD=3.4771;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,21:24:48.10:490,48,0	0/0:15,0:15:36.12:0,36,453	0/0:20,0:20:36.54:0,37,515	0/0:26,0:24:60.17:0,60,714	0/0:29,0:28:78.22:0,78,954	0/0:28,0:28:81.26:0,81,1019	0/0:26,0:26:48.14:0,48,592	0/0:26,0:26:69.68:0,70,847	0/0:22,0:22:48.14:0,48,591	0/0:16,0:16:42.13:0,42,525	0/0:14,0:14:33.11:0,33,413	0/0:22,0:22:60.18:0,60,743	0/0:23,0:23:45.14:0,45,566	0/0:25,0:25:63.20:0,63,792	1/1:1,31:32:87.19:887,87,0	0/0:19,0:19:36.12:0,36,453	0/0:22,0:22:54.17:0,54,679	0/0:19,0:19:57.18:0,57,715	0/0:20,0:20:51.16:0,51,630	0/0:17,0:17:45.14:0,45,566	0/0:40,0:39:81.23:0,81,991	0/0:20,0:20:51.15:0,51,629	0/0:23,0:23:54.12:0,54,648	0/0:23,0:23:42.09:0,42,510	0/0:27,0:27:48.15:0,48,604	0/0:27,0:27:75.24:0,75,942	0/0:28,0:28:78.21:0,78,963	0/0:9,0:9:21.07:0,21,264
chr10	25095970	.	C	CGTGTGT	4721.38	PASS	AB=0.938;AC=44;AF=0.846;AN=52;BaseQRankSum=-1.772;DP=687;FS=3.971;HRun=0;HaplotypeScore=160.6711;InbreedingCoeff=0.1039;MQ=63.97;MQ0=10;MQRankSum=-0.209;QD=7.83;ReadPosRankSum=-0.484;VQSLOD=3.7415;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:32:15.32:44,0,15	1/1:9,0:9:15.02:229,15,0	./.	./.	0/1:24,0:24:10.32:172,0,10	1/1:14,8:26:6.02:134,6,0	1/1:23,0:22:11.99:145,12,0	1/1:31,0:30:17.80:137,18,0	1/1:9,9:21:4.19:100,4,0	0/1:25,0:25:30.06:244,0,30	0/1:12,0:14:52.49:67,0,52	1/1:11,13:28:6.01:121,6,0	1/1:12,0:24:6.02:132,6,0	1/1:30,0:30:23.90:373,24,0	1/1:19,11:37:9.03:230,9,0	1/1:11,13:29:17.61:441,18,0	0/0:15,0:16:3.01:0,3,36	0/1:12,0:13:0.34:0,0,0	1/1:16,0:16:21.88:199,22,0	1/1:10,10:30:2.27:95,2,0	1/1:45,0:42:57.07:732,57,0	0/1:16,0:24:0:0,0,0	1/1:3,11:17:6.02:134,6,0	1/1:15,16:36:5.71:84,6,0	1/1:14,0:14:5.56:101,6,0	1/1:21,0:21:17.04:228,17,0	1/1:18,0:18:29.88:352,30,0	1/1:13,0:13:14.96:225,15,0
chr10	25096774	.	GA	G	933.21	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.645;DP=567;FS=7.907;HRun=6;HaplotypeScore=54.5958;InbreedingCoeff=0.9875;MQ=93.40;MQ0=0;MQRankSum=-5.413;QD=22.76;ReadPosRankSum=2.602;VQSLOD=2.6628;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,17:21:48.11:508,48,0	0/0:7,0:7:18.06:0,18,234	0/0:23,0:21:51.95:0,52,587	0/0:31,0:31:55.65:0,56,737	0/0:22,0:22:66.19:0,66,829	0/0:29,0:29:87.27:0,87,1116	0/0:12,0:12:36.09:0,36,439	0/0:38,0:38:99:0,108,1361	0/0:13,0:13:39.13:0,39,507	0/0:23,0:23:66.20:0,66,827	0/0:24,0:24:60.20:0,60,779	0/0:16,0:16:45.14:0,45,572	0/0:19,0:19:48.16:0,48,622	0/0:17,0:17:51.12:0,51,631	1/1:2,18:20:51.13:547,51,0	0/0:14,0:14:36.12:0,36,468	0/0:23,0:23:63.16:0,63,785	0/0:26,0:26:69.19:0,69,866	0/0:11,0:11:33.04:0,33,363	0/0:23,0:23:63.08:0,63,776	0/0:17,0:17:51.17:0,51,662	0/0:26,0:26:78.20:0,78,958	0/0:17,0:17:48.15:0,48,618	0/0:15,0:15:45.13:0,45,570	0/0:18,0:18:54.16:0,54,688	0/0:21,0:21:57.18:0,57,727	0/0:34,0:34:99:0,99,1231	0/0:5,0:5:15.05:0,15,195
chr10	25098155	.	A	ACTCT	5798.21	PASS	AB=0.650;AC=51;AF=0.944;AN=54;BaseQRankSum=-1.649;DP=554;FS=4.442;HRun=0;HaplotypeScore=137.7605;InbreedingCoeff=0.2608;MQ=63.51;MQ0=3;MQRankSum=-2.191;QD=11.46;ReadPosRankSum=-1.876;VQSLOD=4.1604;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:31:33.04:0,33,306	1/1:7,0:7:3.01:70,3,0	1/1:12,0:8:1.25:3,1,0	./.	1/1:18,0:20:2.71:52,3,0	1/1:18,2:31:6.16:123,6,0	1/1:9,0:10:2.74:12,3,0	1/1:29,0:29:6.02:75,6,0	1/1:14,0:20:12.04:203,12,0	1/1:15,0:26:33.07:547,33,0	1/1:16,1:25:9.03:175,9,0	1/1:11,1:12:9.03:175,9,0	1/1:19,0:23:20.99:315,21,0	1/1:11,2:14:8.79:175,9,0	1/1:16,0:22:8.80:156,9,0	1/1:6,1:12:9.03:162,9,0	0/1:18,18:39:10.91:714,0,11	1/1:6,4:10:11.78:214,12,0	1/1:21,0:22:13.29:261,13,0	1/1:13,7:18:5.94:123,6,0	1/1:11,0:11:5.54:108,6,0	1/1:14,0:19:2.25:11,2,0	1/1:25,0:25:18.04:321,18,0	1/1:7,11:20:23.50:509,23,0	1/1:9,5:14:6.02:142,6,0	1/1:16,1:23:39.60:718,40,0	1/1:19,0:24:20.47:382,20,0	1/1:9,0:8:5.04:53,5,0
chr10	25098284	.	AT	A	7860.77	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=2.613;DP=487;FS=2.840;HRun=10;HaplotypeScore=77.0763;InbreedingCoeff=0.9676;MQ=81.19;MQ0=0;MQRankSum=-1.424;QD=20.26;ReadPosRankSum=1.992;VQSLOD=5.9228;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,15:16:32.99:286,33,0	1/1:1,3:4:8.99:78,9,0	0/0:15,1:16:18.19:0,18,207	0/0:21,0:21:33.31:0,33,283	1/1:5,14:19:41.99:365,42,0	1/1:2,28:31:74.02:631,74,0	1/1:4,11:15:26.98:234,27,0	1/1:4,27:32:82.99:704,83,0	1/1:0,21:21:53.99:469,54,0	1/1:2,20:22:59.99:520,60,0	1/1:6,13:19:40.74:362,41,0	1/1:1,16:17:38.99:339,39,0	1/1:2,18:20:50.99:443,51,0	1/1:4,9:12:17.99:156,18,0	0/0:22,0:22:56.99:0,57,611	1/1:0,14:14:38.99:338,39,0	0/0:26,0:26:66.18:0,66,728	0/0:14,0:14:39.11:0,39,431	1/1:7,18:25:53.96:465,54,0	1/1:1,20:21:56.25:493,56,0	1/1:1,6:7:12:104,12,0	1/1:1,11:12:29.98:260,30,0	1/1:0,11:11:14.78:130,15,0	1/1:2,11:13:29.98:260,30,0	1/1:2,8:10:17.99:156,18,0	1/1:1,19:20:53.99:467,54,0	1/1:1,18:19:50.99:443,51,0	1/1:0,7:7:18:156,18,0
chr10	25098727	.	GA	G	13042.99	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=7.253;DP=589;FS=1.223;HRun=5;HaplotypeScore=63.4098;InbreedingCoeff=0.9959;MQ=85.09;MQ0=0;MQRankSum=-3.210;QD=28.73;ReadPosRankSum=2.933;VQSLOD=5.3834;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,105,1417	1/1:0,7:7:18.05:204,18,0	0/0:23,0:23:53.40:0,53,602	0/0:22,0:21:52.21:0,52,573	1/1:3,24:27:69.19:782,69,0	1/1:1,29:30:66.19:749,66,0	1/1:2,28:30:78.22:885,78,0	1/1:1,26:27:78.19:866,78,0	1/1:1,19:20:54.15:612,54,0	1/1:2,24:26:66.17:740,66,0	1/1:3,9:12:27.08:306,27,0	1/1:3,22:25:60.17:681,60,0	1/1:2,24:26:72.21:816,72,0	1/1:1,20:21:48.11:544,48,0	0/0:21,0:21:60.19:0,60,806	1/1:0,24:24:69.20:783,69,0	0/0:20,0:20:57.18:0,57,763	0/0:13,0:13:33.11:0,33,451	1/1:0,22:22:66.17:736,66,0	1/1:0,17:17:51.10:564,51,0	1/1:2,23:25:54.15:612,54,0	1/1:3,12:15:30.08:340,30,0	1/1:2,19:21:57.16:646,57,0	1/1:4,11:15:24.07:272,24,0	1/1:2,12:14:33.09:374,33,0	1/1:3,19:22:57.16:647,57,0	1/1:1,20:20:60.17:681,60,0	1/1:0,7:7:18.05:204,18,0
chr10	25099115	.	GA	G	1219.34	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=7.637;DP=462;FS=0.000;HRun=8;HaplotypeScore=47.4400;InbreedingCoeff=0.9145;MQ=76.25;MQ0=1;MQRankSum=-2.751;QD=22.17;ReadPosRankSum=-3.093;VQSLOD=2.3250;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,14:15:30.05:290,30,0	0/0:10,0:10:27.08:0,27,326	0/0:13,0:11:26.11:0,26,292	0/0:18,0:17:37.64:0,38,418	0/0:32,0:32:87.19:0,87,1023	0/0:17,0:17:42.13:0,42,507	0/0:14,0:14:42.13:0,42,507	1/1:3,22:25:66.11:637,66,0	0/0:10,0:10:30.09:0,30,362	0/0:20,0:20:51.15:0,51,608	0/0:17,0:17:48.15:0,48,580	0/0:7,0:7:21:0,21,235	0/0:21,0:21:63.18:0,63,750	0/0:14,0:14:42.13:0,42,507	1/1:0,15:15:45.07:435,45,0	0/0:23,0:23:60.17:0,60,713	0/0:23,0:23:69.21:0,69,834	0/0:21,0:21:51.16:0,51,616	0/0:21,0:21:48.15:0,48,580	0/0:19,0:19:57.16:0,57,677	0/0:13,0:13:36.11:0,36,435	0/0:1,0:1:3.01:0,3,36	0/0:13,0:13:39.11:0,39,463	0/0:5,0:5:15.05:0,15,181	0/0:20,0:20:57.17:0,57,678	0/0:27,0:27:72.22:0,72,870	0/0:25,0:25:72.22:0,72,870	0/0:3,0:3:9:0,9,85
chr10	25101065	.	AC	A	575.56	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.574;DP=582;FS=4.972;HRun=1;HaplotypeScore=93.4553;InbreedingCoeff=0.9977;MQ=85.89;MQ0=0;MQRankSum=-3.034;QD=33.86;ReadPosRankSum=-0.144;VQSLOD=3.1713;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:57.11:0,57,788	0/0:13,0:13:39.11:0,39,550	0/0:21,0:21:59.98:0,60,757	0/0:17,0:17:50.82:0,51,594	0/0:31,0:31:90.30:0,90,1306	0/0:25,0:25:75.22:0,75,1057	0/0:12,0:12:36.12:0,36,526	0/0:43,0:43:99:0,126,1770	0/0:18,0:18:54.18:0,54,785	0/0:29,0:29:84.22:0,84,1141	0/0:28,0:28:81.27:0,81,1184	0/0:14,0:14:42.12:0,42,594	0/0:19,0:19:57.19:0,57,831	0/0:20,0:20:60.20:0,60,875	1/1:0,17:17:48.16:670,48,0	0/0:19,0:19:54.18:0,54,789	0/0:17,0:17:51.17:0,51,743	0/0:17,0:17:51.07:0,51,677	0/0:20,0:20:60.15:0,60,803	0/0:21,0:21:63.16:0,63,877	0/0:8,0:8:24.08:0,24,350	0/0:23,0:23:69.19:0,69,950	0/0:29,0:29:87.26:0,87,1229	0/0:16,0:16:48.14:0,48,682	0/0:22,0:22:66.17:0,66,888	0/0:27,0:27:81.25:0,81,1149	0/0:20,0:20:60.15:0,60,818	0/0:16,0:16:48.02:0,48,605
chr10	25101368	.	CTT	C	19427.58	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=13.340;DP=710;FS=5.184;HRun=4;HaplotypeScore=89.9704;InbreedingCoeff=0.9937;MQ=85.21;MQ0=3;MQRankSum=-4.012;QD=38.17;ReadPosRankSum=5.366;VQSLOD=3.9947;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,111,2065	1/1:0,11:10:21.07:309,21,0	0/0:25,0:25:66.01:0,66,1110	0/0:22,0:22:63.21:0,63,1106	1/1:0,28:28:69.23:1016,69,0	1/1:0,25:25:66.22:972,66,0	1/1:0,19:19:42.14:619,42,0	0/0:43,0:43:99:0,126,2350	1/1:0,27:27:72.24:1060,72,0	1/1:1,21:22:63.21:925,63,0	1/1:0,17:17:48.16:707,48,0	1/1:0,25:25:63.21:928,63,0	1/1:1,29:30:75.25:1104,75,0	1/1:0,30:28:75.25:1105,75,0	0/0:29,0:29:87.30:0,87,1625	1/1:0,18:18:48.16:707,48,0	0/0:28,0:28:84.27:0,84,1535	0/0:16,0:16:48.16:0,48,886	1/1:1,16:17:45.12:634,45,0	1/1:0,35:35:96.32:1412,96,0	1/1:0,31:31:87.29:1281,87,0	1/1:2,23:25:66.22:972,66,0	1/1:0,29:29:72.24:1061,72,0	1/1:0,33:33:93.31:1370,93,0	1/1:1,21:22:48.16:707,48,0	1/1:0,34:34:99:1478,102,0	1/1:1,23:24:60.20:884,60,0	1/1:3,4:7:12.04:177,12,0
chr10	25102055	.	TATAA	T	17657.69	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=3.441;DP=451;FS=1.872;HRun=0;HaplotypeScore=84.0792;InbreedingCoeff=0.8757;MQ=62.69;MQ0=1;MQRankSum=-1.508;QD=44.93;ReadPosRankSum=0.910;VQSLOD=5.2745;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,13:15:30.10:592,30,0	1/1:1,3:4:9.03:179,9,0	0/0:5,0:4:9.02:0,9,95	0/0:2,0:2:2.99:0,3,23	1/1:2,28:30:72.20:1392,72,0	1/1:0,18:18:51.18:1016,51,0	1/1:0,9:9:12.04:239,12,0	1/1:4,32:36:96.16:1455,96,0	1/1:1,12:13:27.09:538,27,0	1/1:0,18:19:57.14:1014,57,0	1/1:1,22:23:57.15:1092,57,0	1/1:0,8:8:24.08:478,24,0	1/1:0,25:25:47.92:954,48,0	1/1:0,13:13:33.11:656,33,0	0/0:18,0:18:32.59:0,33,93	1/1:1,14:15:33.11:657,33,0	0/0:15,0:15:42.10:0,42,1085	0/0:18,0:18:54.19:0,54,1475	1/1:2,14:16:42.06:671,42,0	1/1:1,29:29:81.28:1586,81,0	1/1:0,5:5:12.04:239,12,0	1/1:0,10:10:18.06:358,18,0	1/1:2,16:18:36.12:670,36,0	1/1:0,2:2:3.01:60,3,0	1/1:0,24:24:54.18:1032,54,0	1/1:3,22:25:69.21:1288,69,0	1/1:1,17:18:35.87:716,36,0	1/1:0,17:17:39.13:777,39,0
chr10	25102057	.	TAA	T	7518.05	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=9.153;DP=434;FS=13.053;HRun=4;HaplotypeScore=101.0479;InbreedingCoeff=0.8496;MQ=62.47;MQ0=1;MQRankSum=-0.711;QD=19.08;ReadPosRankSum=2.071;VQSLOD=1.6745;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:13:29.77:214,30,0	1/1:3,0:3:8.95:66,9,0	0/0:6,0:5:9.01:0,9,85	0/0:1,0:1:2.68:0,3,11	1/1:29,0:29:68.59:502,69,0	1/1:18,0:18:50.71:372,51,0	1/1:9,0:9:11.93:87,12,0	1/1:32,0:32:95.48:769,95,0	1/1:12,0:12:26.85:197,27,0	1/1:18,0:19:56.42:409,56,0	1/1:22,0:22:53.66:390,54,0	1/1:8,0:8:23.86:175,24,0	1/1:25,0:25:47.46:349,47,0	1/1:13,0:13:32.81:240,33,0	1/1:0,18:18:48.16:705,48,0	1/1:14,0:14:32.82:243,33,0	0/0:15,0:15:42.07:0,42,675	0/0:18,0:18:54.17:0,54,950	1/1:14,0:14:35.76:262,36,0	1/1:30,0:29:80.50:588,80,0	1/1:5,0:5:11.93:88,12,0	1/1:10,0:10:17.90:131,18,0	1/1:17,0:17:35.73:257,36,0	1/1:2,0:2:2.98:22,3,0	1/1:24,0:24:53.61:387,54,0	1/1:23,0:23:68.55:519,69,0	1/1:17,0:17:35.32:263,35,0	1/1:17,0:17:38.78:285,39,0
chr10	25104047	.	T	TAATAAATA	5005.87	PASS	AB=1.000;AC=41;AF=0.932;AN=44;BaseQRankSum=-1.253;DP=256;FS=3.074;HRun=0;HaplotypeScore=74.9928;InbreedingCoeff=0.2275;MQ=72.80;MQ0=2;MQRankSum=1.552;QD=23.61;ReadPosRankSum=0.318;VQSLOD=4.1085;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:10,0:12:0.33:0,0,17	1/1:5,1:6:3.01:123,3,0	./.	0/0:8,0:5:2.99:0,3,23	1/1:7,2:9:9.03:226,9,0	1/1:10,3:13:21.06:557,21,0	1/1:2,0:2:3.01:59,3,0	1/1:35,0:35:45.11:859,45,0	1/1:8,3:11:9.03:367,9,0	1/1:9,1:10:9.03:262,9,0	./.	1/1:4,1:5:3.01:123,3,0	1/1:2,0:2:3.01:59,3,0	./.	1/1:8,0:9:1.32:4,1,0	1/1:4,1:5:3.01:123,3,0	1/1:11,5:18:12.04:416,12,0	1/1:7,0:16:17.96:147,18,0	1/1:8,2:10:12:325,12,0	1/1:9,1:10:3.01:123,3,0	./.	1/1:5,1:6:3.01:123,3,0	./.	./.	1/1:8,1:9:6.02:197,6,0	1/1:8,1:9:6.02:244,6,0	1/1:5,1:6:3.01:124,3,0	1/1:4,4:8:15.05:547,15,0
chr10	25104094	.	T	TAAGTA	11147.22	PASS	AC=44;AF=0.880;AN=50;BaseQRankSum=-3.942;DP=203;FS=5.194;HRun=0;HaplotypeScore=46.0037;InbreedingCoeff=0.6748;MQ=52.87;MQ0=1;MQRankSum=-3.774;QD=67.97;ReadPosRankSum=-0.718;VQSLOD=4.7586;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,7:11:20.86:583,21,0	1/1:2,1:2:6.02:132,6,0	./.	0/0:5,0:3:6.02:0,6,76	1/1:2,5:7:12.04:379,12,0	1/1:3,7:10:30.10:773,30,0	./.	1/1:13,17:27:54.17:1400,54,0	1/1:1,4:5:15.05:474,15,0	1/1:3,7:10:30.10:893,30,0	1/1:1,4:6:15.05:438,15,0	1/1:1,2:3:6.02:190,6,0	1/1:0,2:2:6.02:190,6,0	1/1:0,2:2:6.02:190,6,0	1/1:1,5:6:18.06:513,18,0	1/1:1,1:2:6.02:132,6,0	0/0:16,0:16:42.14:0,42,868	0/0:16,0:16:39.13:0,39,822	1/1:3,13:16:42.12:1203,42,0	1/1:0,3:3:9.03:284,9,0	./.	1/1:1,2:3:9.03:227,9,0	1/1:0,2:2:6.02:153,6,0	1/1:0,2:2:3.01:95,3,0	1/1:2,7:11:24.08:663,24,0	1/1:0,5:6:18.06:539,18,0	1/1:4,5:10:27.09:746,27,0	1/1:0,10:12:30.10:950,30,0
chr10	25106170	.	A	AGAC	24131.57	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-4.703;DP=454;FS=0.000;HRun=0;HaplotypeScore=84.6667;InbreedingCoeff=0.9317;MQ=67.08;MQ0=1;MQRankSum=-3.783;QD=59.00;ReadPosRankSum=2.887;VQSLOD=6.4741;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,28:29:63.21:1551,63,0	1/1:1,6:7:18.06:443,18,0	0/0:14,0:13:36.10:0,36,615	0/0:8,0:8:20.43:0,20,244	1/1:1,27:27:63.22:1551,63,0	1/1:2,24:26:51.18:1256,51,0	1/1:1,9:11:21.07:517,21,0	1/1:2,28:32:90.31:2177,90,0	1/1:0,11:11:30.10:739,30,0	1/1:0,21:23:69.20:1612,69,0	1/1:0,23:23:51.18:1256,51,0	1/1:0,8:8:24.08:591,24,0	1/1:2,12:14:36.12:887,36,0	1/1:1,14:15:36.12:885,36,0	1/1:0,13:14:33.11:813,33,0	1/1:0,12:12:30.10:739,30,0	0/0:19,0:19:44.80:0,45,942	0/0:4,0:4:12.04:0,12,224	1/1:1,17:18:51.18:1254,51,0	1/1:0,21:21:48.16:1182,48,0	1/1:0,7:7:6.02:148,6,0	1/1:0,9:10:21.07:517,21,0	1/1:0,10:10:18.06:443,18,0	1/1:1,7:8:9.31:222,9,0	1/1:0,20:20:51.18:1256,51,0	1/1:1,24:26:75.26:1821,75,0	1/1:3,26:31:81.28:1975,81,0	1/1:0,4:4:12.04:296,12,0
chr10	25106377	.	T	TTCC	23290.33	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-2.935;DP=475;FS=5.281;HRun=0;HaplotypeScore=69.6351;InbreedingCoeff=0.9598;MQ=85.78;MQ0=0;MQRankSum=-6.816;QD=56.26;ReadPosRankSum=4.317;VQSLOD=6.9983;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,22:25:63.22:1425,63,0	1/1:1,2:3:6.02:138,6,0	0/0:24,0:24:41.18:0,41,870	0/0:12,0:12:30.07:0,30,467	1/1:1,18:20:45.15:1020,45,0	1/1:2,16:18:48.16:1092,48,0	1/1:1,8:9:21.07:484,21,0	1/1:10,28:39:99:2169,105,0	1/1:0,17:18:48.16:1093,48,0	1/1:1,17:18:51.18:1165,51,0	1/1:0,16:16:36.12:814,36,0	1/1:0,14:14:39.13:899,39,0	1/1:2,9:11:30.10:679,30,0	1/1:2,22:24:54.19:1231,54,0	1/1:2,13:16:42.14:942,42,0	1/1:1,15:16:42.14:968,42,0	0/0:16,0:16:48.14:0,48,789	0/0:9,0:9:27.09:0,27,456	1/1:1,18:20:57.20:1304,57,0	1/1:1,23:27:48.16:1105,48,0	1/1:2,8:11:24.08:553,24,0	1/1:1,11:12:26.88:621,27,0	1/1:1,14:17:30.10:689,30,0	1/1:1,3:4:12:227,12,0	1/1:2,9:11:30.10:677,30,0	1/1:2,31:33:93.32:2144,93,0	1/1:2,20:23:57.20:1296,57,0	1/1:0,8:8:24.08:553,24,0
chr10	25106728	.	GAGCCCAGGGTC	G	20055.16	PASS	AC=46;AF=0.920;AN=50;BaseQRankSum=7.176;DP=509;FS=4.311;HRun=0;HaplotypeScore=131.0348;InbreedingCoeff=0.8244;MQ=33.72;MQ0=38;MQRankSum=-7.229;QD=46.00;ReadPosRankSum=1.150;VQSLOD=4.5918;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:8,11:11:15.05:535,15,0	1/1:0,6:5:12.04:428,12,0	./.	./.	1/1:2,26:23:30.03:976,30,0	1/1:1,17:16:24.01:767,24,0	1/1:5,11:14:12.04:428,12,0	1/1:4,21:23:63.14:1862,63,0	1/1:0,20:20:42.14:1464,42,0	1/1:0,16:11:27.09:931,27,0	1/1:1,12:12:12.04:390,12,0	1/1:4,14:15:24.08:855,24,0	1/1:2,24:26:33.11:1177,33,0	1/1:3,19:19:21.07:749,21,0	1/1:3,23:25:30:945,30,0	1/1:1,24:25:42.14:1497,42,0	0/0:41,0:38:48.11:0,48,2019	0/0:20,0:19:22.38:0,22,910	1/1:2,22:23:60.08:1578,60,0	1/1:2,23:22:27.02:788,27,0	1/1:6,9:9:3.01:107,3,0	1/1:0,17:16:39.13:1389,39,0	1/1:1,9:9:9.50:322,10,0	1/1:3,13:13:18.06:608,18,0	1/1:3,14:14:12.44:288,12,0	1/1:0,16:15:42.09:1329,42,0	1/1:1,17:16:18.06:642,18,0	./.
chr10	25107802	.	A	AT	150.70	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-1.644;DP=277;FS=18.450;HRun=8;HaplotypeScore=41.2480;InbreedingCoeff=0.5125;MQ=54.39;MQ0=4;MQRankSum=-0.888;QD=13.70;ReadPosRankSum=0.496;VQSLOD=1.5074;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:39.02:0,39,357	0/0:3,0:3:9:0,9,82	0/0:9,0:2:6:0,6,55	0/0:9,0:3:1.55:0,2,4	0/0:19,0:18:39:0,39,352	0/0:10,0:10:23.94:0,24,209	0/0:5,0:5:12.01:0,12,110	0/0:23,0:20:42.21:0,42,351	0/0:8,0:8:21:0,21,188	0/0:13,0:13:33:0,33,298	0/0:15,0:15:39.01:0,39,357	0/0:1,0:1:3:0,3,27	0/0:7,0:7:18.01:0,18,165	0/0:4,0:4:9:0,9,82	1/1:2,9:11:21.06:242,21,0	0/0:2,0:2:6:0,6,52	0/0:13,0:13:30.02:0,30,274	0/0:13,0:13:21.01:0,21,192	0/0:10,0:9:27.01:0,27,247	0/0:12,0:12:30.01:0,30,275	0/0:11,0:11:24.01:0,24,220	0/0:5,0:5:6:0,6,55	0/0:3,0:3:9:0,9,82	0/0:3,0:3:6:0,6,55	0/0:10,0:10:24.01:0,24,220	0/0:19,0:17:45:0,45,405	0/0:12,0:12:27.01:0,27,246	0/0:6,0:6:18.01:0,18,165
chr10	25107918	.	C	CT	41.32	PASS	AC=2;AF=0.143;AN=14;BaseQRankSum=2.958;DP=74;FS=13.725;HRun=0;HaplotypeScore=37.8987;MQ=79.41;MQ0=2;MQRankSum=-2.958;QD=10.33;ReadPosRankSum=0.888;VQSLOD=2.4571;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:13,0:10:24.07:0,24,308	0/0:26,0:15:12.10:0,12,355	0/0:1,0:1:3.01:0,3,37	./.	./.	0/0:4,0:1:2.97:0,3,20	./.	./.	./.	./.	./.	./.	1/1:0,4:4:12.01:119,12,0	./.	0/0:15,0:15:39.13:0,39,545	0/0:5,0:5:15.05:0,15,210	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.
chr10	25107919	.	CTAA	C	72.75	PASS	AC=2;AF=0.167;AN=12;BaseQRankSum=2.906;DP=74;FS=14.916;HRun=0;HaplotypeScore=42.4390;MQ=79.42;MQ0=0;MQRankSum=-2.279;QD=18.19;ReadPosRankSum=1.192;VQSLOD=1.4961;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:15,0:11:23.91:0,24,495	0/0:27,0:15:39.09:0,39,787	0/0:1,0:1:0.47:0,0,1	./.	./.	./.	./.	./.	./.	./.	./.	./.	1/1:0,4:4:12.04:149,12,0	./.	0/0:15,0:15:39.13:0,39,907	0/0:5,0:5:15.05:0,15,365	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.
chr10	25113202	.	CTGGAAT	C	3798.54	PASS	AC=18;AF=0.818;AN=22;BaseQRankSum=4.519;DP=392;FS=94.691;HRun=0;HaplotypeScore=96.5024;InbreedingCoeff=0.8059;MQ=12.33;MQ0=301;MQRankSum=-0.972;QD=25.32;ReadPosRankSum=1.399;VQSLOD=-0.5707;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	1/1:5,3:3:9.03:221,9,0	./.	./.	1/1:9,11:12:30.10:738,30,0	./.	./.	./.	./.	1/1:19,3:2:6.02:148,6,0	1/1:9,5:6:15.05:332,15,0	./.	./.	./.	./.	./.	0/0:37,0:7:18.02:0,18,568	0/0:20,0:3:6.02:0,6,196	./.	1/1:12,11:12:33.11:774,33,0	./.	./.	1/1:8,6:6:18.06:404,18,0	./.	1/1:9,7:8:18.06:443,18,0	1/1:17,4:4:12.04:295,12,0	./.	1/1:6,6:7:18.06:443,18,0
chr10	25113213	.	TCAGG	T	3112.03	PASS	AC=18;AF=0.818;AN=22;BaseQRankSum=4.260;DP=398;FS=85.868;HRun=0;HaplotypeScore=91.0960;InbreedingCoeff=0.7612;MQ=11.68;MQ0=317;MQRankSum=0.000;QD=22.23;ReadPosRankSum=1.957;VQSLOD=0.1840;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	1/1:3,3:3:9.03:188,9,0	./.	./.	1/1:7,11:11:30.10:627,30,0	./.	./.	./.	./.	1/1:17,3:2:6.02:126,6,0	1/1:8,5:5:15.05:277,15,0	./.	./.	./.	./.	./.	0/0:40,0:6:18.06:0,18,489	0/0:24,0:3:3.01:0,3,87	./.	1/1:12,11:11:33.11:653,33,0	./.	./.	1/1:10,6:6:18.06:338,18,0	./.	1/1:5,7:6:18.06:376,18,0	1/1:17,4:4:12.04:251,12,0	./.	1/1:5,6:6:18.06:377,18,0
chr10	25113967	.	T	TG	4958.39	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=5.606;DP=699;FS=5.187;HRun=0;HaplotypeScore=160.6984;InbreedingCoeff=0.9572;MQ=75.55;MQ0=0;MQRankSum=0.108;QD=8.13;ReadPosRankSum=1.666;VQSLOD=4.9181;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:20:9.31:93,9,0	1/1:17,0:17:37.65:161,38,0	0/0:13,0:13:39.12:0,39,510	0/0:15,0:15:40.33:0,40,504	1/1:31,0:31:64.72:260,65,0	1/1:25,1:26:60.73:283,61,0	1/1:30,0:30:49.19:217,49,0	1/1:30,0:30:39.91:177,40,0	1/1:28,0:28:50.66:186,51,0	1/1:36,0:34:89.58:454,90,0	1/1:27,0:27:56.54:228,57,0	1/1:16,0:16:24.97:103,25,0	1/1:39,0:39:73.21:280,73,0	1/1:28,1:29:54.26:255,54,0	0/0:28,0:28:76.88:0,77,515	1/1:24,1:25:47.65:219,48,0	0/0:25,0:25:75.25:0,75,1048	0/0:8,0:8:21.03:0,21,268	1/1:19,0:19:14.22:120,14,0	1/1:38,0:38:82.88:313,83,0	1/1:32,0:32:57.32:216,57,0	1/1:21,0:21:50.17:201,50,0	1/1:30,0:30:47.24:244,47,0	1/1:13,0:13:22.15:85,22,0	1/1:26,0:26:60.03:222,60,0	1/1:34,1:35:73.18:375,73,0	1/1:37,0:37:67.36:249,67,0	1/1:5,0:5:5.85:17,6,0
chr10	25114056	.	T	TC	23664.30	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=10.035;DP=643;FS=11.732;HRun=0;HaplotypeScore=199.7854;InbreedingCoeff=0.9985;MQ=86.49;MQ0=0;MQRankSum=-9.770;QD=42.03;ReadPosRankSum=5.774;VQSLOD=1.8822;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,24:24:45.15:718,45,0	1/1:1,9:10:27.09:431,27,0	0/0:27,0:27:78.23:0,78,1035	0/0:24,0:24:69.23:0,69,952	1/1:1,24:25:66.21:1054,66,0	1/1:1,24:25:72.25:1150,72,0	1/1:1,19:20:48.16:765,48,0	1/1:1,21:22:63.21:998,63,0	1/1:2,24:26:69.24:1102,69,0	1/1:1,21:22:63.21:1007,63,0	1/1:0,25:25:66.23:1054,66,0	1/1:1,18:19:45.15:719,45,0	1/1:0,26:26:75.25:1182,75,0	1/1:0,29:29:81.28:1293,81,0	1/1:1,36:37:99:1675,105,0	1/1:0,24:24:60.20:959,60,0	0/0:21,0:21:60.19:0,60,822	0/0:8,0:8:24.08:0,24,336	1/1:2,13:15:39.13:623,39,0	1/1:3,34:37:93.32:1485,93,0	1/1:0,13:13:36.12:575,36,0	1/1:0,22:22:60.20:957,60,0	1/1:0,27:27:69.24:1101,69,0	1/1:1,14:15:39.13:623,39,0	1/1:1,23:24:54.18:863,54,0	1/1:2,28:30:87.30:1390,87,0	1/1:2,35:38:99:1553,99,0	1/1:0,8:8:24.08:384,24,0
chr10	25114675	.	A	AACACAC	444.20	PASS	AB=1.000;AC=9;AF=0.173;AN=52;BaseQRankSum=-3.834;DP=526;FS=4.559;HRun=0;HaplotypeScore=181.2604;InbreedingCoeff=0.4403;MQ=56.68;MQ0=8;MQRankSum=0.031;QD=4.68;ReadPosRankSum=-1.619;VQSLOD=2.1509;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:18,0:17:0.87:1,0,64	0/0:8,0:8:3.01:0,3,42	./.	./.	0/0:24,0:24:18.06:0,18,242	0/0:23,0:23:17.54:0,18,219	0/0:17,0:17:2.96:0,3,19	0/0:27,0:24:2.11:0,2,18	0/0:12,0:12:12.04:0,12,167	0/0:20,0:20:2.24:0,2,16	0/0:11,0:11:6.02:0,6,83	0/0:17,0:16:9.03:0,9,125	0/0:17,0:17:23.47:0,23,302	0/0:14,0:14:15.05:0,15,209	0/0:27,0:27:30.28:0,30,325	0/0:20,0:20:23.81:0,24,305	1/1:11,9:25:9:290,9,0	1/1:7,0:8:13.86:245,14,0	0/1:18,0:18:2.29:2,0,36	0/0:27,0:27:14.04:0,14,177	0/1:14,0:14:0:0,0,0	0/0:13,0:13:6.02:0,6,84	0/0:17,0:17:6.02:0,6,84	1/1:12,0:12:2.98:24,3,0	0/0:18,0:18:21.03:0,21,271	0/0:23,0:23:18.74:0,19,204	0/0:30,0:29:17.59:0,18,244	0/0:5,0:5:3.01:0,3,61
chr10	25114695	.	CACACACACACACACACAT	C	7551.64	PASS	AB=0.975;AC=33;AF=0.589;AN=56;BaseQRankSum=7.878;DP=550;FS=16.275;HRun=0;HaplotypeScore=245.6604;InbreedingCoeff=0.1244;MQ=51.93;MQ0=11;MQRankSum=-1.853;QD=18.74;ReadPosRankSum=3.982;VQSLOD=2.2829;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:20:17.34:0,17,1663	0/1:6,2:8:12:144,0,12	0/0:20,0:8:6.01:0,6,109	0/0:33,0:18:29.94:0,30,660	1/1:27,1:28:19.94:619,20,0	1/1:21,1:22:20.75:640,21,0	0/1:13,0:13:23.91:24,0,81	0/1:21,0:18:22.66:23,0,436	1/1:14,1:15:12.04:419,12,0	0/1:20,0:20:15.66:146,0,16	1/1:15,0:15:8.61:204,9,0	1/1:16,0:15:9.03:309,9,0	1/1:22,0:22:23.54:718,24,0	0/1:18,0:18:8.10:566,0,8	0/0:29,0:29:36.12:0,36,1537	0/1:22,0:22:10.25:691,0,10	0/0:30,0:30:42.11:0,42,1658	0/0:14,0:14:31.83:0,32,1148	0/1:11,1:12:61.68:201,0,62	1/1:23,0:23:19.82:483,20,0	1/1:20,0:20:1.49:108,1,0	1/1:14,0:14:6.02:219,6,0	0/1:21,0:21:14.58:171,0,15	0/1:16,0:16:56.87:57,0,242	1/1:16,1:17:21.07:627,21,0	0/1:27,0:27:55.91:625,0,56	0/1:24,0:24:34.39:515,0,34	1/1:9,0:8:8.39:43,8,0
chr10	25114697	.	CACACACACACACACAT	C	11905.31	PASS	AB=0.873;AC=41;AF=0.732;AN=56;BaseQRankSum=2.872;DP=546;FS=15.990;HRun=0;HaplotypeScore=210.8927;InbreedingCoeff=0.6405;MQ=52.06;MQ0=11;MQRankSum=-1.634;QD=29.25;ReadPosRankSum=2.055;VQSLOD=2.7361;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:20:16.65:0,17,1390	1/1:8,0:8:6.01:141,6,0	0/0:16,0:5:6.01:0,6,79	0/0:29,0:15:29.94:0,30,512	1/1:12,16:28:23.04:848,23,0	1/1:9,13:22:22.79:839,23,0	0/1:5,8:13:55.29:70,0,55	0/1:21,0:18:64.71:65,0,228	1/1:5,10:15:12.04:523,12,0	1/1:4,14:18:35.64:469,36,0	1/1:4,12:16:11.97:326,12,0	1/1:7,9:15:9.03:387,9,0	1/1:3,19:22:26.10:1098,26,0	1/1:12,5:17:31.13:838,31,0	0/0:28,0:28:36.12:0,36,1223	1/1:7,17:24:24.05:1085,24,0	0/0:30,0:30:42.11:0,42,1395	0/0:14,0:14:31:0,31,926	1/1:13,0:13:17.87:261,18,0	1/1:6,17:23:32.48:846,32,0	1/1:20,0:20:32.84:309,33,0	1/1:5,9:14:6.02:251,6,0	1/1:5,16:21:8.83:297,9,0	0/1:16,0:16:99:296,0,102	1/1:4,14:18:21.07:867,21,0	1/1:9,18:27:54.02:1094,54,0	1/1:10,14:24:17.52:813,18,0	1/1:11,0:10:17.91:184,18,0
chr10	25114707	.	CACACAT	C	5557.74	PASS	AB=1.000;AC=45;AF=0.804;AN=56;BaseQRankSum=4.247;DP=476;FS=7.077;HRun=0;HaplotypeScore=146.5287;InbreedingCoeff=0.6644;MQ=55.89;MQ0=7;MQRankSum=-3.033;QD=14.40;ReadPosRankSum=3.695;VQSLOD=3.0196;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:22:65.05:116,0,65	1/1:5,0:5:2.99:46,3,0	0/0:12,0:4:11.98:0,12,111	0/0:24,0:17:32.87:0,33,315	1/1:21,0:21:23.95:312,24,0	1/1:18,0:18:20.35:292,20,0	0/0:11,0:11:2.80:0,3,13	1/1:23,0:20:24.22:300,24,0	1/1:13,0:13:12.04:184,12,0	1/1:15,0:15:23.30:188,23,0	1/1:13,0:13:11.89:127,12,0	1/1:12,0:11:9.03:138,9,0	1/1:22,0:22:26.46:383,26,0	1/1:16,0:16:35.83:399,36,0	1/1:21,4:25:31.25:361,31,0	1/1:23,0:23:24.08:369,24,0	0/0:28,0:28:35.17:0,35,567	0/0:14,0:14:0.51:0,1,254	1/1:11,0:11:23.95:221,24,0	1/1:20,0:20:20.09:284,20,0	1/1:19,0:19:35.71:266,36,0	1/1:12,0:12:6.02:92,6,0	1/1:17,0:17:8.96:110,9,0	1/1:13,0:13:23.73:172,24,0	1/1:17,0:17:6.32:262,6,0	1/1:22,0:22:52.98:526,53,0	1/1:18,0:18:17.91:277,18,0	1/1:8,0:7:17.88:135,18,0
chr10	25114709	.	CACAT	C	5038.04	PASS	AB=1.000;AC=47;AF=0.839;AN=56;BaseQRankSum=4.439;DP=430;FS=9.632;HRun=0;HaplotypeScore=122.5526;InbreedingCoeff=0.7226;MQ=58.41;MQ0=7;MQRankSum=-1.991;QD=14.19;ReadPosRankSum=3.879;VQSLOD=3.8711;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:22,1:22:31.05:335,31,0	1/1:2,0:2:3.01:32,3,0	0/0:12,0:4:11.98:0,12,111	0/0:25,0:17:35.84:0,36,354	1/1:17,0:17:23.93:228,24,0	1/1:15,0:16:21.44:210,21,0	0/0:10,0:10:2.94:0,3,18	1/1:24,0:21:21.35:349,21,0	1/1:11,0:11:12.03:128,12,0	1/1:14,0:14:23.32:188,23,0	1/1:12,0:12:11.88:99,12,0	1/1:11,0:10:9.02:96,9,0	1/1:20,0:20:26.54:271,27,0	1/1:13,0:14:38.77:354,39,0	1/1:6,19:25:33.11:543,33,0	1/1:17,0:17:24.06:257,24,0	0/0:28,0:28:33.75:0,34,433	0/1:14,0:14:0.65:1,0,219	1/1:9,0:9:17.53:198,18,0	1/1:19,0:19:13.85:221,14,0	1/1:16,0:16:35.73:266,36,0	1/1:10,0:10:6.02:64,6,0	1/1:16,0:16:8.95:83,9,0	1/1:10,0:10:23.73:171,24,0	1/1:15,0:15:1.20:173,1,0	1/1:18,0:18:46.31:443,46,0	1/1:14,0:14:18.03:193,18,0	1/1:8,0:7:17.88:135,18,0
chr10	25115906	.	CTG	C	3233.06	PASS	AB=0.989;AC=39;AF=0.722;AN=54;BaseQRankSum=-6.899;DP=621;FS=24.540;HRun=0;HaplotypeScore=162.7287;InbreedingCoeff=-0.4012;MQ=40.41;MQ0=23;MQRankSum=5.000;QD=5.31;ReadPosRankSum=-1.661;VQSLOD=1.5484;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:26,1:23:13.63:73,14,0	0/1:10,0:10:12.73:13,0,29	0/1:40,0:5:12.96:13,0,15	0/1:66,0:11:30.71:31,0,39	1/1:20,0:20:10.92:96,11,0	0/1:25,0:25:9.70:138,0,10	1/1:26,0:23:0.48:205,0,0	0/1:30,0:21:94.79:179,0,95	1/1:18,0:18:14.49:121,14,0	0/1:23,0:20:17.10:276,0,17	1/1:19,0:17:14.97:122,15,0	1/1:17,0:17:5.41:134,5,0	0/1:31,1:29:45.66:346,0,46	0/1:16,0:16:13.10:69,0,13	1/1:20,1:20:17.96:164,18,0	1/1:12,0:12:2.99:25,3,0	0/1:10,0:8:37.34:65,0,37	0/1:18,0:16:71.48:105,0,71	0/1:25,0:24:99:236,0,109	0/1:17,0:16:0.02:103,0,0	./.	1/1:27,1:26:20.97:175,21,0	0/1:16,0:16:6.19:106,0,6	1/1:22,0:18:6.93:51,7,0	1/1:24,0:22:17.97:151,18,0	0/1:18,0:16:39.06:184,0,39	0/1:20,0:20:22.07:179,0,22	1/1:3,0:3:2.97:20,3,0
chr10	25115924	.	GTC	G	2127.05	PASS	AB=0.870;AC=41;AF=0.759;AN=54;BaseQRankSum=-0.968;DP=565;FS=14.061;HRun=0;HaplotypeScore=168.8708;InbreedingCoeff=0.4628;MQ=33.89;MQ0=41;MQRankSum=4.078;QD=5.61;ReadPosRankSum=-0.740;VQSLOD=2.5083;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:24:7.65:35,8,0	0/1:7,2:9:7.56:63,0,8	0/0:59,0:3:5.93:0,6,59	0/0:82,0:9:11.62:0,12,85	1/1:11,4:15:4.96:72,5,0	1/1:17,6:22:3.15:120,3,0	1/1:15,4:15:12.47:119,12,0	0/0:20,0:11:8.61:0,9,48	1/1:13,3:16:12.61:108,13,0	0/1:20,2:18:7.69:178,0,8	1/1:10,5:13:3.81:39,4,0	1/1:12,2:14:6.32:73,6,0	1/1:19,6:22:28.47:262,28,0	0/1:18,3:21:0.02:184,0,0	1/1:14,0:17:8.61:61,9,0	1/1:7,2:9:2.87:15,3,0	0/0:7,0:6:6.62:0,7,96	0/0:11,0:13:17.21:0,17,137	1/1:15,2:16:11.98:121,12,0	1/1:1,11:12:6.02:70,6,0	1/1:11,1:10:5.93:73,6,0	1/1:16,5:19:5.92:62,6,0	1/1:8,3:11:12.71:132,13,0	1/1:14,4:16:0.83:2,1,0	1/1:16,4:18:9.01:96,9,0	1/1:14,4:16:12.38:304,12,0	1/1:10,3:13:8.33:94,8,0	./.
chr10	25115943	.	T	TC	1091.23	PASS	AB=0.800;AC=16;AF=0.286;AN=56;BaseQRankSum=4.467;DP=681;FS=5.304;HRun=0;HaplotypeScore=186.2638;InbreedingCoeff=-0.1396;MQ=41.18;MQ0=55;MQRankSum=-6.800;QD=3.49;ReadPosRankSum=-4.122;VQSLOD=2.2518;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,6:27:3.73:0,4,84	0/0:5,2:7:10.01:0,10,125	0/1:95,0:10:75.48:75,0,102	0/0:128,1:18:1.95:0,2,204	0/0:11,2:15:12.87:0,13,83	0/1:21,1:28:29.08:29,0,166	0/1:15,1:15:26.28:26,0,151	0/0:36,0:36:7.09:0,7,668	0/1:11,1:14:15.71:16,0,258	0/1:16,6:24:99:293,0,285	0/1:16,3:20:1.24:1,0,221	0/1:6,2:14:58.41:142,0,58	0/1:13,7:19:99:150,0,228	0/1:13,0:15:16.69:17,0,241	1/1:9,1:19:24.33:180,24,0	0/0:4,1:9:8.26:0,8,67	0/0:10,0:8:13.31:0,13,130	0/0:13,0:10:24.08:0,24,306	0/1:7,2:9:66.87:146,0,67	0/0:18,1:18:22.61:0,23,247	0/0:11,3:15:10.26:0,10,93	0/0:12,6:20:14.21:0,14,162	0/0:11,2:14:15.93:0,16,147	0/0:15,2:18:11.43:0,11,143	0/0:9,1:16:9.81:0,10,64	0/1:14,1:17:65.80:66,0,236	0/1:7,3:10:58.64:59,0,103	1/1:1,0:1:3.01:47,3,0
chr10	25115955	.	GTC	G	1724.61	PASS	AB=0.990;AC=30;AF=0.536;AN=56;BaseQRankSum=-4.775;DP=767;FS=21.448;HRun=0;HaplotypeScore=212.0419;InbreedingCoeff=-0.1324;MQ=44.68;MQ0=49;MQRankSum=5.611;QD=3.56;ReadPosRankSum=1.038;VQSLOD=1.3717;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:37,0:34:4.23:79,4,0	1/1:9,0:9:0.28:16,0,0	0/0:96,0:13:3.08:0,3,91	0/0:138,0:24:14.06:0,14,93	1/1:19,0:19:8.36:66,8,0	0/1:35,1:34:43.84:85,0,44	0/1:21,0:19:6.96:36,0,7	0/1:58,4:57:54.14:445,0,54	0/1:16,0:17:11.29:92,0,11	0/1:28,0:27:99:117,0,224	1/1:18,3:20:4.54:104,5,0	0/1:15,0:15:44.76:45,0,121	0/1:23,0:21:81.62:82,0,82	0/1:17,0:17:23.34:23,0,141	0/0:21,0:19:18.40:0,18,465	1/1:10,1:11:5.26:61,5,0	0/0:8,0:7:8.55:0,9,115	0/0:12,0:9:24.08:0,24,389	0/1:13,0:10:42.09:42,0,114	1/1:21,1:21:7.52:100,8,0	0/1:22,0:18:30.31:45,0,30	0/1:21,0:20:3.97:4,0,7	1/1:16,0:16:9.12:42,9,0	0/1:20,0:18:8.16:30,0,8	1/1:18,1:17:9.12:58,9,0	0/1:22,0:22:42.97:280,0,43	0/1:13,0:13:30.66:38,0,31	0/0:1,0:1:3.01:0,3,49
chr10	25115972	.	T	TC	121.25	PASS	AB=0.903;AC=5;AF=0.089;AN=56;BaseQRankSum=1.571;DP=835;FS=12.873;HRun=0;HaplotypeScore=231.1305;InbreedingCoeff=-0.0881;MQ=45.91;MQ0=44;MQRankSum=-6.909;QD=1.96;ReadPosRankSum=-4.618;VQSLOD=0.7098;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:33:18.46:0,18,274	0/0:9,1:10:21.06:0,21,274	0/0:99,0:13:26.79:0,27,309	0/0:134,0:17:15.78:0,16,174	0/0:26,0:26:23.66:0,24,312	0/0:34,2:36:18.20:0,18,615	0/0:17,0:17:23.85:0,24,323	0/0:90,1:86:67.54:0,68,2199	0/0:17,0:17:42.11:0,42,532	0/0:26,0:25:72.12:0,72,956	0/0:23,1:24:17.47:0,17,515	0/0:18,0:18:16.98:0,17,404	0/0:24,0:22:40.73:0,41,606	0/0:15,1:16:33.65:0,34,386	0/1:21,0:19:4.79:5,0,377	0/0:9,1:11:17.65:0,18,234	0/1:8,2:9:19.29:170,0,19	0/1:13,0:11:9.69:10,0,271	0/0:23,0:21:33.77:0,34,569	0/0:25,1:26:59.65:0,60,718	0/0:23,2:21:24.08:0,24,323	0/0:20,0:19:20.66:0,21,315	0/0:18,0:18:22.91:0,23,296	0/0:22,1:22:17.12:0,17,237	0/0:17,0:16:25.89:0,26,324	0/0:30,0:31:90.12:0,90,1168	0/1:14,0:14:13.27:13,0,222	0/1:2,1:3:31.92:32,0,71
chr10	25115984	.	CTGT	C	345.57	PASS	AB=0.961;AC=8;AF=0.143;AN=56;BaseQRankSum=4.409;DP=795;FS=29.970;HRun=0;HaplotypeScore=227.6667;InbreedingCoeff=0.3795;MQ=43.85;MQ0=45;MQRankSum=-5.887;QD=2.47;ReadPosRankSum=-2.852;VQSLOD=0.9910;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:37:25.09:0,25,426	0/1:11,0:11:4.66:5,0,246	0/1:69,1:10:28.78:29,0,158	0/0:98,0:10:10.97:0,11,128	0/0:24,0:24:29.86:0,30,453	0/0:34,0:32:27.67:0,28,994	0/1:19,2:19:3.14:3,0,434	0/0:82,1:76:99:0,149,3060	0/0:19,0:19:38.98:0,39,597	0/0:30,1:29:26.74:0,27,1077	0/0:24,0:23:38.99:0,39,735	0/0:20,0:20:6.71:0,7,451	0/0:23,0:22:55.85:0,56,780	0/1:16,1:17:9.75:10,0,355	0/0:22,1:22:12.65:0,13,496	0/0:14,1:14:22.04:0,22,276	1/1:9,2:10:8.77:188,9,0	1/1:6,4:7:17.99:242,18,0	0/0:21,0:20:8.99:0,9,639	0/0:31,0:30:68.32:0,68,879	0/0:28,0:23:28.47:0,28,428	0/0:17,0:15:26.80:0,27,440	0/0:21,0:20:24.85:0,25,430	0/0:21,3:23:23.78:0,24,409	0/0:19,0:17:26.09:0,26,408	0/0:32,1:33:43.46:0,43,1326	0/0:15,0:14:5.42:0,5,250	0/0:7,0:7:8.31:0,8,52
chr10	25115987	.	T	TC	327.08	PASS	AB=0.948;AC=9;AF=0.161;AN=56;BaseQRankSum=3.829;DP=798;FS=28.133;HRun=0;HaplotypeScore=214.8451;InbreedingCoeff=0.0993;MQ=42.09;MQ0=43;MQRankSum=-4.952;QD=1.86;ReadPosRankSum=-3.613;VQSLOD=1.2151;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:36:26.13:0,26,278	0/0:11,0:11:20.02:0,20,217	0/1:63,0:7:6.42:6,0,112	0/0:88,0:7:5.90:0,6,65	0/0:28,0:29:27.08:0,27,343	0/0:35,0:34:13.82:0,14,640	0/1:20,0:19:10.87:11,0,277	0/0:76,0:70:99:0,132,1975	0/0:22,1:23:39.01:0,39,474	0/0:29,0:27:4.61:0,5,843	0/0:27,0:26:43.65:0,44,490	0/1:18,0:18:4.41:4,0,341	0/0:22,0:21:53.96:0,54,636	0/1:20,0:20:5.03:5,0,296	0/0:24,0:22:20.54:0,21,367	0/0:14,0:14:20.57:0,21,219	0/1:8,4:11:15.16:173,0,15	1/1:7,3:7:18.05:230,18,0	0/1:23,0:23:3.84:4,0,476	0/0:33,0:32:50.59:0,51,534	0/0:27,3:25:12.81:0,13,264	0/0:18,0:16:23.84:0,24,277	0/0:24,0:23:23.80:0,24,275	0/0:26,0:25:24.01:0,24,315	0/0:16,0:15:25.68:0,26,271	0/0:35,0:35:18.75:0,19,1049	0/0:16,0:15:28.69:0,29,258	0/1:8,0:7:23.61:24,0,29
chr10	25115997	.	C	CTGT	346.42	PASS	AB=0.869;AC=3;AF=0.056;AN=54;BaseQRankSum=1.294;DP=784;FS=2.650;HRun=0;HaplotypeScore=221.7461;InbreedingCoeff=-0.0642;MQ=41.80;MQ0=41;MQRankSum=-3.211;QD=7.87;ReadPosRankSum=-1.703;VQSLOD=2.7262;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:40:30.30:0,30,478	0/0:14,0:14:26.90:0,27,396	0/0:45,0:3:8.70:0,9,96	./.	0/0:30,0:30:32.66:0,33,522	0/0:40,0:38:39.36:0,39,1028	0/0:22,0:21:26.96:0,27,438	0/0:59,0:53:99:0,104,2030	0/0:27,0:27:42.14:0,42,678	0/0:30,0:28:79.79:0,80,1240	0/0:24,0:23:35.80:0,36,577	0/0:19,0:19:38.56:0,39,549	0/0:25,0:24:54.06:0,54,870	0/0:21,0:21:38.88:0,39,625	0/0:22,0:22:32.50:0,33,492	0/0:16,0:15:21.78:0,22,310	0/1:10,2:11:99:240,0,133	0/1:8,4:9:86.66:188,0,87	0/1:20,0:19:17.78:18,0,624	0/0:36,0:35:38.49:0,38,647	0/0:33,0:27:20.44:0,20,336	0/0:24,0:22:38.54:0,39,630	0/0:28,0:27:26.46:0,26,425	0/0:25,0:24:19.09:0,19,333	0/0:16,0:14:23.92:0,24,404	0/0:40,0:40:99:0,108,1637	0/0:22,0:21:33.10:0,33,479	0/0:11,0:7:9.03:0,9,131
chr10	25116029	.	CTCTCTT	C	4807.82	PASS	AB=0.936;AC=32;AF=0.571;AN=56;BaseQRankSum=-3.945;DP=542;FS=26.209;HRun=0;HaplotypeScore=136.0039;InbreedingCoeff=-0.2422;MQ=61.43;MQ0=14;MQRankSum=0.301;QD=10.04;ReadPosRankSum=3.705;VQSLOD=1.6928;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:31,0:29:78.99:79,0,364	1/1:9,1:10:16.62:215,17,0	0/0:22,0:19:26.06:0,26,312	0/0:19,0:12:12.40:0,12,188	0/1:20,2:22:32.02:96,0,32	0/1:28,0:26:99:137,0,519	0/1:22,0:21:15.68:200,0,16	1/1:14,0:13:4.99:174,5,0	1/1:20,0:20:10.92:66,11,0	0/1:19,0:18:99:323,0,122	0/1:17,1:18:53.40:150,0,53	0/1:14,0:14:99:130,0,109	0/1:24,0:24:99:141,0,468	0/1:11,0:11:45.31:154,0,45	1/1:3,19:22:11.77:243,12,0	0/1:17,0:16:25.76:165,0,26	0/0:11,0:11:8.47:0,8,148	0/0:11,0:9:2.34:0,2,133	0/1:12,2:13:31.38:255,0,31	1/1:22,2:23:4.52:274,5,0	0/1:28,0:23:10.32:243,0,10	0/1:20,0:20:99:204,0,125	0/1:5,15:20:15.67:63,0,16	1/1:17,0:17:8.87:84,9,0	0/1:15,0:15:32.45:168,0,32	1/1:1,29:30:70.40:795,70,0	1/1:24,1:24:49.64:439,50,0	0/1:7,7:11:8.99:9,0,38
chr10	25116031	.	CTCTT	C	5318.54	PASS	AB=0.958;AC=41;AF=0.732;AN=56;BaseQRankSum=-3.691;DP=522;FS=15.457;HRun=0;HaplotypeScore=115.9213;InbreedingCoeff=0.3127;MQ=65.69;MQ0=12;MQRankSum=-1.042;QD=11.69;ReadPosRankSum=2.884;VQSLOD=3.1579;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:31,0:29:96.90:97,0,154	1/1:8,2:10:20.45:255,20,0	0/0:24,0:21:32.02:0,32,358	0/0:21,0:14:15.36:0,15,207	1/1:8,11:19:15.26:134,15,0	0/1:28,0:28:99:205,0,280	1/1:19,1:19:28.35:234,28,0	1/1:13,0:12:20.40:192,20,0	1/1:6,12:18:9.10:117,9,0	0/1:16,4:19:49.66:492,0,50	1/1:17,0:17:23.78:187,24,0	0/1:12,2:14:17.33:242,0,17	0/1:25,0:25:99:145,0,208	1/1:11,2:13:7.41:195,7,0	1/1:20,0:20:9.24:125,9,0	1/1:13,1:14:35.69:316,36,0	0/0:11,0:11:29.62:0,30,249	0/0:11,0:9:14.32:0,14,188	1/1:14,0:14:18.36:299,18,0	1/1:20,2:21:41.90:396,42,0	1/1:28,0:23:12.84:248,13,0	0/1:21,0:21:35.66:258,0,36	1/1:19,0:19:4.11:32,4,0	1/1:11,0:11:8.56:71,9,0	1/1:13,0:13:26.90:224,27,0	1/1:29,0:29:49.11:480,49,0	1/1:23,0:22:44.58:365,45,0	0/1:13,0:10:9.25:9,0,24
chr10	25116033	.	CTT	C	5180.77	PASS	AB=1.000;AC=45;AF=0.804;AN=56;BaseQRankSum=-1.488;DP=501;FS=32.996;HRun=5;HaplotypeScore=99.0177;InbreedingCoeff=0.6062;MQ=70.02;MQ0=10;MQRankSum=-1.490;QD=12.08;ReadPosRankSum=4.831;VQSLOD=0.4077;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:27,3:28:22:214,22,0	1/1:9,0:9:20.70:181,21,0	0/0:25,0:22:28.29:0,28,352	0/0:24,0:17:17.14:0,17,238	1/1:17,0:17:8.86:62,9,0	0/1:28,0:28:57.35:254,0,57	1/1:21,1:21:35.85:303,36,0	1/1:12,0:12:26.94:226,27,0	1/1:17,0:17:5.63:44,6,0	0/1:18,0:17:4.19:346,0,4	1/1:13,0:13:20.88:163,21,0	1/1:11,1:12:23.92:206,24,0	1/1:22,1:23:8.38:327,8,0	1/1:11,1:12:23.71:189,24,0	1/1:19,0:19:8.80:78,9,0	1/1:14,1:15:29.69:237,30,0	0/0:11,0:11:32.91:0,33,293	0/0:12,0:10:20.62:0,21,200	1/1:15,0:15:32.94:277,33,0	1/1:20,0:19:38.83:321,39,0	1/1:24,0:20:32.94:271,33,0	1/1:21,0:21:35.92:386,36,0	1/1:18,0:18:4.58:32,5,0	1/1:11,0:11:8.76:70,9,0	1/1:11,0:11:26.97:225,27,0	1/1:29,0:29:47.96:407,48,0	1/1:21,0:20:44.30:351,44,0	0/1:12,0:10:11.52:12,0,15
chr10	25116437	.	AAC	A	1543.11	PASS	AB=1.000;AC=37;AF=0.771;AN=48;BaseQRankSum=-3.488;DP=446;FS=7.614;HRun=0;HaplotypeScore=64.9391;InbreedingCoeff=0.4630;MQ=72.63;MQ0=26;MQRankSum=2.221;QD=5.57;ReadPosRankSum=1.241;VQSLOD=1.3585;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:30:14.93:0,15,115	1/1:9,0:9:3.05:42,3,0	./.	./.	0/1:13,0:13:17.96:19,0,18	1/1:11,0:10:2.98:21,3,0	1/1:21,0:19:14.94:117,15,0	./.	1/1:14,0:12:11.81:89,12,0	0/0:11,0:11:14.87:0,15,110	1/1:14,0:14:1.99:42,2,0	1/1:15,0:14:2.90:16,3,0	1/1:9,0:9:11.86:81,12,0	1/1:7,0:7:8.97:71,9,0	1/1:18,0:18:23.88:181,24,0	0/1:19,0:18:10:77,0,10	0/0:24,0:22:20.94:0,21,165	0/0:6,0:5:11.84:0,12,84	1/1:20,0:19:8.92:69,9,0	./.	1/1:22,0:19:20.64:153,21,0	1/1:13,0:13:11.81:85,12,0	1/1:9,0:9:5.99:48,6,0	0/1:19,0:17:7.06:91,0,7	1/1:12,0:12:17.95:144,18,0	1/1:11,0:11:20.94:174,21,0	1/1:12,0:12:14.92:113,15,0	1/1:9,0:6:8.96:69,9,0
chr10	25116481	.	CAGAGAG	C	1962.43	PASS	AB=0.935;AC=28;AF=0.667;AN=42;BaseQRankSum=-1.506;DP=488;FS=7.451;HRun=0;HaplotypeScore=114.8427;InbreedingCoeff=0.3381;MQ=44.23;MQ0=35;MQRankSum=2.760;QD=6.77;ReadPosRankSum=-0.152;VQSLOD=1.6582;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	1/1:9,0:9:3.01:59,3,0	./.	./.	./.	0/1:13,0:12:8.79:9,0,64	1/1:31,0:25:5.86:109,6,0	0/0:28,0:26:0.89:0,1,2	1/1:15,0:12:9.03:180,9,0	0/0:11,0:11:2.99:0,3,24	1/1:8,0:14:5.95:68,6,0	0/1:6,0:5:0:0,0,0	1/1:19,0:19:17.80:334,18,0	0/0:14,0:14:3.53:0,4,41	1/1:21,0:20:12.56:79,13,0	0/0:12,9:19:0.19:0,0,0	0/1:25,0:22:3.80:327,0,4	0/0:8,0:6:1.25:0,1,3	1/1:11,1:11:3.01:60,3,0	1/1:20,0:17:8.87:57,9,0	1/1:35,0:29:18.06:334,18,0	./.	0/1:13,0:20:0:0,0,0	./.	./.	1/1:14,4:17:8.96:176,9,0	1/1:21,0:21:11.75:220,12,0	1/1:10,0:8:3.01:59,3,0
chr10	25117324	.	G	GA	16384.29	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-10.697;DP=562;FS=0.000;HRun=6;HaplotypeScore=45.6577;InbreedingCoeff=0.9936;MQ=92.50;MQ0=0;MQRankSum=-6.672;QD=33.51;ReadPosRankSum=2.995;VQSLOD=4.5777;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,23:24:69.18:849,69,0	1/1:0,10:10:30.10:377,30,0	0/0:30,0:30:69.12:0,69,693	0/0:16,0:16:30.03:0,30,295	1/1:3,20:23:57.17:704,57,0	1/1:1,21:22:63.20:793,63,0	1/1:1,13:14:27.09:340,27,0	1/1:5,30:35:90.27:1116,90,0	1/1:1,19:20:54.17:679,54,0	1/1:5,12:17:36.12:453,36,0	1/1:1,28:29:78.21:963,78,0	1/1:1,12:13:24.08:302,24,0	1/1:2,19:21:57.18:705,57,0	1/1:1,11:12:33.11:415,33,0	1/1:1,20:21:60.19:755,60,0	1/1:1,22:23:60.19:755,60,0	0/0:20,1:21:25.41:0,25,568	0/0:6,0:6:15.03:0,15,153	1/1:5,23:28:75.20:921,75,0	1/1:1,27:28:78.25:981,78,0	1/1:0,15:15:45.14:566,45,0	1/1:1,14:15:42.13:528,42,0	1/1:0,20:20:57.13:717,57,0	1/1:1,28:29:81.26:1019,81,0	1/1:0,14:14:42.13:528,42,0	1/1:5,24:29:75.24:935,75,0	1/1:0,17:17:51.16:642,51,0	1/1:0,10:10:27.09:340,27,0
chr10	25118065	.	C	CT	5447.30	PASS	AB=0.670;AC=34;AF=0.607;AN=56;BaseQRankSum=-7.550;DP=672;FS=9.150;HRun=13;HaplotypeScore=94.4260;InbreedingCoeff=0.3057;MQ=76.31;MQ0=1;MQRankSum=2.112;QD=10.44;ReadPosRankSum=0.162;VQSLOD=3.6351;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:39:74.62:0,75,495	1/1:5,12:18:29.20:301,29,0	0/0:24,0:23:2.82:0,3,91	0/1:10,0:9:8.19:12,0,8	0/1:17,22:40:1.04:399,0,1	1/1:5,13:21:19.69:203,20,0	1/1:5,16:21:27.41:380,27,0	0/0:27,0:27:20.51:0,21,141	1/1:3,14:17:33.04:306,33,0	0/1:10,17:29:0.24:281,0,0	1/1:6,16:25:13.81:283,14,0	0/1:5,17:23:11.29:179,0,11	1/1:7,21:31:7.87:260,8,0	1/1:16,7:24:32.08:317,32,0	0/0:1,0:22:38.69:0,39,113	1/1:3,15:19:32.87:293,33,0	0/0:16,0:16:23.63:0,24,164	0/0:21,0:21:22.15:0,22,214	0/1:9,13:23:4.61:246,0,5	1/1:17,18:35:8.25:314,8,0	0/1:10,8:19:31.85:152,0,32	0/1:7,13:21:10.67:195,0,11	1/1:5,14:21:25.10:212,25,0	1/1:8,19:29:3.39:317,3,0	0/1:10,15:27:5.45:216,0,5	1/1:8,13:23:7.53:234,8,0	0/1:11,20:30:1.44:279,0,1	0/1:9,5:14:24.91:68,0,25
chr10	25119081	.	C	CG	18457.21	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=-14.603;DP=640;FS=3.048;HRun=3;HaplotypeScore=56.7279;InbreedingCoeff=0.9984;MQ=80.90;MQ0=0;MQRankSum=-2.534;QD=37.98;ReadPosRankSum=4.150;VQSLOD=5.2029;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:81.25:0,81,968	1/1:0,14:14:36.12:502,36,0	0/0:16,0:16:44.96:0,45,501	0/0:15,0:15:37.61:0,38,397	1/1:0,33:34:90.28:1240,90,0	1/1:0,15:15:45.15:630,45,0	1/1:4,19:23:57.18:798,57,0	0/0:36,0:36:93.28:0,93,1114	1/1:0,18:18:54.18:756,54,0	1/1:2,23:25:69.23:965,69,0	1/1:2,23:25:69.23:963,69,0	1/1:1,19:20:51.17:714,51,0	1/1:0,20:20:60.20:840,60,0	1/1:1,19:20:57.19:798,57,0	0/0:22,0:22:60.18:0,60,720	1/1:1,21:22:54.18:756,54,0	0/0:20,0:20:60.18:0,60,720	0/0:16,0:16:45.14:0,45,540	1/1:1,27:28:78.23:1068,78,0	1/1:3,32:35:90.30:1259,90,0	1/1:1,32:33:86.89:1217,87,0	1/1:0,27:27:78.26:1090,78,0	1/1:0,24:24:69.23:966,69,0	1/1:2,25:27:69.23:964,69,0	1/1:0,7:7:18.06:252,18,0	1/1:0,32:31:93.04:1213,93,0	1/1:1,26:27:75.25:1048,75,0	1/1:0,10:10:30.10:420,30,0
chr10	25120771	.	G	GA	12429.62	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=-11.104;DP=518;FS=1.514;HRun=7;HaplotypeScore=48.5089;InbreedingCoeff=0.9787;MQ=73.42;MQ0=0;MQRankSum=-2.644;QD=29.74;ReadPosRankSum=2.637;VQSLOD=5.2357;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:54.08:0,54,521	1/1:0,10:10:30.09:362,30,0	0/0:8,0:8:12.01:0,12,114	0/0:8,0:9:12.24:0,12,83	1/1:4,37:41:99:1288,108,0	1/1:3,19:22:51.16:616,51,0	1/1:0,10:10:24.07:290,24,0	0/0:20,0:20:44.35:0,44,423	1/1:0,7:7:21.06:254,21,0	1/1:5,17:22:48.15:580,48,0	1/1:5,23:28:69.21:830,69,0	1/1:2,11:13:27.08:326,27,0	1/1:1,23:24:63.19:761,63,0	1/1:4,9:13:30.07:348,30,0	0/0:12,0:12:30.04:0,30,290	1/1:0,18:18:51.16:616,51,0	0/0:27,0:27:78.12:0,78,752	0/0:4,0:4:12.02:0,12,116	1/1:6,21:27:65.56:768,66,0	1/1:0,26:26:78.21:927,78,0	1/1:2,17:19:45.14:544,45,0	1/1:3,16:19:39.08:455,39,0	1/1:2,16:18:39.12:471,39,0	1/1:2,15:17:45.14:544,45,0	1/1:2,18:20:51.16:616,51,0	1/1:4,25:28:75.20:892,75,0	1/1:3,27:30:63.19:761,63,0	1/1:0,5:5:15.05:181,15,0
chr10	25120876	.	AG	A	13299.53	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=9.829;DP=573;FS=4.016;HRun=6;HaplotypeScore=94.9330;InbreedingCoeff=0.9948;MQ=85.89;MQ0=0;MQRankSum=-5.412;QD=27.88;ReadPosRankSum=5.940;VQSLOD=4.7692;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:84.24:0,84,1071	1/1:2,10:12:24.06:257,24,0	0/0:17,0:17:48.16:0,48,627	0/0:23,0:23:48.63:0,49,627	1/1:1,26:27:75.19:806,75,0	1/1:0,31:31:84.21:903,84,0	1/1:6,13:19:36.09:387,36,0	0/0:26,0:25:63.20:0,63,814	1/1:2,13:15:36.09:387,36,0	1/1:0,25:25:72.18:773,72,0	1/1:2,23:25:63.16:677,63,0	1/1:0,17:17:48.12:515,48,0	1/1:0,17:17:51.13:547,51,0	1/1:0,16:16:42.11:451,42,0	1/1:2,14:16:36.09:387,36,0	1/1:0,18:18:51.13:547,51,0	1/1:3,20:23:57.14:613,57,0	1/1:1,12:13:36.09:387,36,0	1/1:1,19:20:57.12:597,57,0	1/1:3,25:28:69.17:741,69,0	1/1:0,12:12:33.08:355,33,0	1/1:2,19:21:48.51:490,49,0	1/1:1,14:15:39.10:419,39,0	1/1:1,16:17:42.11:451,42,0	1/1:5,18:23:60.12:635,60,0	1/1:4,25:29:78.18:825,78,0	1/1:0,32:32:93.20:988,93,0	1/1:0,6:6:15.04:161,15,0
chr10	25121451	.	A	AT	780.41	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-8.390;DP=587;FS=5.091;HRun=8;HaplotypeScore=53.1076;InbreedingCoeff=0.9912;MQ=82.78;MQ0=0;MQRankSum=-1.437;QD=25.17;ReadPosRankSum=-0.101;VQSLOD=4.2952;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:42.02:0,42,384	0/0:8,0:8:21:0,21,192	0/0:23,0:23:48:0,48,435	0/0:10,0:10:23.93:0,24,198	0/0:33,0:33:90.03:0,90,819	0/0:29,0:29:81.04:0,81,741	0/0:10,0:10:24:0,24,220	0/0:39,0:39:93.02:0,93,844	0/0:15,0:15:39:0,39,353	0/0:43,0:43:99:0,120,1096	0/0:30,0:30:84:0,84,754	0/0:13,0:13:36.02:0,36,330	0/0:20,0:20:51:0,51,461	0/0:15,0:15:36.01:0,36,330	0/0:16,0:16:42.02:0,42,384	0/0:14,0:14:39.01:0,39,352	1/1:1,21:22:60.18:692,60,0	1/1:1,8:9:18.05:208,18,0	0/0:18,0:18:45:0,45,412	0/0:29,0:29:87.03:0,87,792	0/0:16,0:17:44.04:0,44,385	0/0:27,0:27:81.04:0,81,741	0/0:19,0:19:54.03:0,54,494	0/0:15,0:15:42.02:0,42,384	0/0:28,0:28:75.01:0,75,681	0/0:31,0:31:84.02:0,84,769	0/0:26,0:26:72.02:0,72,654	0/0:12,0:12:36.02:0,36,329
chr10	25121625	.	G	GA	21676.64	PASS	AC=50;AF=0.926;AN=54;BaseQRankSum=0.245;DP=589;FS=25.498;HRun=1;HaplotypeScore=80.7142;InbreedingCoeff=0.9829;MQ=89.27;MQ0=0;MQRankSum=-10.523;QD=39.70;ReadPosRankSum=6.780;VQSLOD=2.6898;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,20:20:54.18:809,54,0	1/1:0,10:10:24.08:360,24,0	0/0:21,0:21:60.15:0,60,729	0/0:22,0:22:60.16:0,60,730	1/1:0,20:20:60.20:899,60,0	1/1:0,26:26:69.23:1034,69,0	1/1:1,18:19:30.10:450,30,0	1/1:0,30:31:93.20:1325,93,0	1/1:0,28:28:72.24:1079,72,0	1/1:1,21:22:63.21:944,63,0	1/1:1,15:16:42.06:601,42,0	1/1:0,24:24:63.21:944,63,0	1/1:0,24:24:69.23:1034,69,0	1/1:0,14:14:33.11:495,33,0	1/1:0,24:24:63.21:944,63,0	1/1:0,18:18:48.16:719,48,0	1/1:2,15:17:39.13:572,39,0	1/1:0,5:5:12.04:180,12,0	1/1:1,15:16:45.13:637,45,0	1/1:0,34:34:99:1446,102,0	1/1:0,21:21:54.18:809,54,0	1/1:1,23:24:63.17:916,63,0	1/1:0,19:19:51.17:764,51,0	1/1:0,22:22:66.22:989,66,0	1/1:0,22:22:63.21:944,63,0	1/1:0,33:33:99:1441,99,0	1/1:1,36:37:90.30:1341,90,0	./.
chr10	25121776	.	C	CT	1311.84	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-8.357;DP=619;FS=0.000;HRun=8;HaplotypeScore=79.7799;InbreedingCoeff=0.9359;MQ=78.93;MQ0=2;MQRankSum=-1.946;QD=24.29;ReadPosRankSum=1.174;VQSLOD=4.2377;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:32.96:0,33,302	0/0:14,1:15:7.40:0,7,322	0/0:45,0:33:43.58:0,44,367	0/0:24,0:15:6.09:0,6,80	0/0:32,0:33:95.07:0,95,852	0/0:17,0:18:41.05:0,41,363	0/0:19,0:19:51.02:0,51,463	0/0:21,0:21:38.86:0,39,345	0/0:22,0:22:57.03:0,57,522	0/0:32,0:32:93.05:0,93,851	0/0:23,0:23:63:0,63,564	0/0:17,0:17:48.02:0,48,435	0/0:14,0:14:39:0,39,348	0/0:17,0:17:45.02:0,45,412	1/1:4,12:16:33.10:381,33,0	0/0:22,0:22:66.02:0,66,599	1/1:4,21:25:57.17:658,57,0	1/1:0,13:13:36.11:415,36,0	0/0:22,0:22:63.03:0,63,576	0/0:31,0:31:90:0,90,811	0/0:13,0:13:36:0,36,325	0/0:23,0:23:66.02:0,66,600	0/0:23,0:23:63.03:0,63,576	0/0:15,0:15:42:0,42,379	0/0:23,0:22:63.02:0,63,577	0/0:40,1:41:76.41:0,76,946	0/0:32,0:31:90.02:0,90,815	0/0:8,0:8:21.01:0,21,192
chr10	25122431	.	G	GA	12410.41	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=-13.157;DP=579;FS=2.252;HRun=8;HaplotypeScore=49.3195;InbreedingCoeff=0.9895;MQ=75.90;MQ0=0;MQRankSum=-0.978;QD=27.89;ReadPosRankSum=3.802;VQSLOD=5.2330;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:54:0,54,488	1/1:0,7:7:18.05:208,18,0	0/0:17,0:17:38.53:0,39,353	0/0:7,0:7:15.01:0,15,137	1/1:3,27:30:81.24:935,81,0	1/1:1,23:24:66.20:762,66,0	1/1:2,15:17:39.12:450,39,0	0/0:26,0:26:66.02:0,66,604	1/1:3,18:21:51.15:588,51,0	1/1:3,23:26:72.20:819,72,0	1/1:3,24:27:69.16:781,69,0	1/1:0,19:19:48.14:554,48,0	1/1:4,15:19:45.08:504,45,0	1/1:2,14:17:36.11:413,36,0	0/0:26,0:26:69.02:0,69,626	1/1:3,14:17:33.10:381,33,0	0/0:23,0:23:60.02:0,60,549	0/0:16,0:16:45.02:0,45,412	1/1:2,14:16:42.12:485,42,0	1/1:5,34:39:99:1118,102,0	1/1:0,4:4:12.04:138,12,0	1/1:1,22:23:54.16:623,54,0	1/1:6,28:35:78.06:880,78,0	1/1:5,16:21:45.13:519,45,0	1/1:2,24:26:35.72:665,36,0	1/1:4,19:24:60.01:672,60,0	1/1:4,19:24:57:638,57,0	1/1:1,8:9:24.07:277,24,0
chr10	25123152	.	AGT	A	2599.37	PASS	AB=0.881;AC=36;AF=0.818;AN=44;BaseQRankSum=-0.926;DP=524;FS=1.241;HRun=0;HaplotypeScore=82.7668;InbreedingCoeff=0.3963;MQ=60.10;MQ0=11;MQRankSum=3.511;QD=7.12;ReadPosRankSum=0.905;VQSLOD=2.7423;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:22:3.11:0,3,8	./.	./.	./.	1/1:19,0:17:2.98:21,3,0	1/1:21,5:26:26.73:238,27,0	1/1:20,1:20:6.65:86,7,0	0/0:31,0:29:8.76:0,9,52	1/1:14,2:16:9.02:96,9,0	1/1:27,1:27:12.02:119,12,0	1/1:12,0:12:2.94:18,3,0	1/1:15,2:17:12.03:128,12,0	1/1:20,3:23:33.08:347,33,0	1/1:13,1:15:8.86:78,9,0	0/1:16,3:20:26.12:142,0,26	1/1:17,4:21:15.04:160,15,0	1/1:15,0:13:5.52:25,6,0	0/0:13,0:12:5.27:0,5,34	./.	./.	0/1:24,2:24:0.08:197,0,0	1/1:22,6:27:21.04:216,21,0	./.	1/1:18,4:23:44.94:459,45,0	1/1:12,3:16:7.19:161,7,0	1/1:12,0:11:3.01:32,3,0	1/1:18,0:17:11.86:104,12,0	1/1:7,1:8:9.02:96,9,0
chr10	25123235	.	ATG	A	7540.17	PASS	AB=0.781;AC=44;AF=0.786;AN=56;BaseQRankSum=-2.802;DP=523;FS=38.002;HRun=0;HaplotypeScore=99.9537;InbreedingCoeff=0.0425;MQ=48.52;MQ0=52;MQRankSum=1.992;QD=16.29;ReadPosRankSum=2.130;VQSLOD=3.0884;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,16:25:34.95:590,35,0	1/1:3,5:8:18.06:225,18,0	1/1:51,0:7:2.37:8,2,0	0/0:43,0:6:3.01:0,3,47	1/1:5,14:17:42.12:512,42,0	1/1:8,13:20:0.69:482,1,0	1/1:8,8:14:5.10:264,5,0	0/1:49,0:42:43.86:197,0,44	1/1:2,12:14:35.91:449,36,0	0/1:11,6:17:53.37:187,0,53	1/1:3,8:10:27.07:324,27,0	1/1:5,9:14:30.09:370,30,0	1/1:8,9:17:36.09:423,36,0	0/1:8,12:19:12.26:473,0,12	0/1:13,2:14:52.64:53,0,253	1/1:4,5:9:15.05:188,15,0	0/1:11,1:12:16.88:17,0,251	0/0:16,0:16:48.10:0,48,723	0/1:9,4:11:17.79:135,0,18	0/1:2,10:13:20.06:271,0,20	1/1:14,15:25:42.05:487,42,0	1/1:5,12:17:31.08:442,31,0	1/1:4,7:11:12.02:240,12,0	1/1:8,9:17:30.09:369,30,0	1/1:3,10:13:33.11:412,33,0	0/1:7,5:12:49.04:235,0,49	1/1:2,3:5:9.03:113,9,0	1/1:4,2:6:6.02:75,6,0
chr10	25123260	.	ATG	A	723.49	PASS	AB=0.974;AC=7;AF=0.125;AN=56;BaseQRankSum=-4.276;DP=524;FS=2.546;HRun=0;HaplotypeScore=138.9137;InbreedingCoeff=0.5528;MQ=47.40;MQ0=50;MQRankSum=-1.195;QD=6.96;ReadPosRankSum=1.239;VQSLOD=3.0290;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:22:33.11:0,33,500	0/0:8,0:8:24.08:0,24,370	0/1:44,0:7:1.16:1,0,168	0/0:48,0:7:14.92:0,15,185	0/0:28,0:26:63.14:0,63,939	0/0:22,0:21:57.09:0,57,870	0/0:14,0:12:21.05:0,21,317	0/0:23,0:20:39.80:0,40,732	0/0:16,0:16:39:0,39,545	0/0:14,0:12:29.30:0,29,354	0/0:11,0:10:27.08:0,27,389	0/0:20,0:20:46.05:0,46,666	0/0:15,0:15:20.66:0,21,484	0/0:20,0:19:51.14:0,51,742	0/1:8,0:8:24.91:25,0,87	0/0:10,0:10:23.60:0,24,315	1/1:6,5:11:13.52:161,14,0	1/1:3,18:21:54.17:662,54,0	0/0:15,0:7:14.26:0,14,203	0/1:16,1:15:2.05:2,0,457	0/0:46,0:40:47.75:0,48,727	0/0:18,0:19:33.09:0,33,480	0/0:10,0:9:27.09:0,27,437	0/0:18,0:18:19.98:0,20,303	0/0:12,0:12:33.10:0,33,509	0/0:16,0:15:36.66:0,37,526	0/0:6,0:5:15.05:0,15,244	0/0:3,0:3:6.02:0,6,97
chr10	25123285	.	GTA	G	3441.16	PASS	AB=0.979;AC=36;AF=0.643;AN=56;BaseQRankSum=5.652;DP=515;FS=22.663;HRun=0;HaplotypeScore=141.7754;InbreedingCoeff=-0.0457;MQ=46.18;MQ0=47;MQRankSum=-0.764;QD=7.48;ReadPosRankSum=3.915;VQSLOD=1.4719;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:20,2:18:27.96:157,28,0	1/1:9,2:11:6.03:203,6,0	1/1:43,0:5:3.95:37,4,0	0/1:44,0:4:12.10:12,0,19	0/1:25,1:24:21.04:137,0,21	0/1:18,0:18:48.03:164,0,48	1/1:17,1:16:36.76:173,37,0	0/0:17,0:15:21.92:0,22,337	0/1:14,1:15:2.74:218,0,3	1/1:13,2:13:37.01:254,37,0	1/1:14,0:12:0.87:92,1,0	0/1:17,1:18:28.18:202,0,28	1/1:12,3:15:11.22:255,11,0	0/1:18,1:18:15.80:160,0,16	0/1:5,0:5:8.95:9,0,132	0/1:11,1:12:1.51:114,0,2	0/0:13,0:12:20.06:0,20,439	0/0:24,1:25:68.58:0,69,1175	0/1:15,0:5:2.61:3,0,81	0/1:17,0:15:16.27:112,0,16	0/1:48,1:44:10.33:281,0,10	1/1:17,0:17:28.09:221,28,0	0/1:11,0:10:21.78:93,0,22	1/1:13,1:14:24.06:149,24,0	0/1:9,0:9:17.71:33,0,18	1/1:22,1:22:24:266,24,0	0/1:8,0:8:7.63:64,0,8	1/1:2,0:2:5.82:33,6,0
chr10	25123287	.	ATG	A	8450.83	PASS	AC=46;AF=0.852;AN=54;BaseQRankSum=-1.408;DP=513;FS=0.665;HRun=0;HaplotypeScore=125.9603;InbreedingCoeff=0.8474;MQ=46.00;MQ0=48;MQRankSum=1.776;QD=20.61;ReadPosRankSum=-1.321;VQSLOD=4.4908;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,10:18:29.23:306,29,0	1/1:3,8:11:30.04:342,30,0	1/1:45,0:5:2.74:12,3,0	./.	1/1:5,20:24:50.70:536,51,0	1/1:5,13:18:36.71:467,37,0	1/1:5,13:16:39.12:488,39,0	0/0:18,0:15:6:0,6,51	1/1:6,9:15:36.10:431,36,0	1/1:5,11:13:39.12:482,39,0	1/1:6,10:14:30.03:334,30,0	1/1:7,11:18:41.92:496,42,0	1/1:4,10:14:35.90:429,36,0	1/1:7,13:19:42.04:476,42,0	0/0:5,0:5:9.03:0,9,144	1/1:5,7:12:21.23:254,21,0	0/0:12,0:12:24.55:0,25,384	0/0:25,0:25:65.48:0,65,1011	1/1:14,1:6:6.02:75,6,0	1/1:7,8:14:35.77:386,36,0	1/1:9,37:41:59.61:669,60,0	1/1:1,16:17:48.07:564,48,0	1/1:4,7:10:24.03:281,24,0	1/1:3,11:14:26.69:295,27,0	1/1:6,3:10:17.96:177,18,0	1/1:6,15:21:57:670,57,0	1/1:1,6:7:18.01:207,18,0	1/1:0,2:2:6.02:75,6,0
chr10	25123301	.	GTT	G	2452.26	PASS	AB=0.988;AC=28;AF=0.500;AN=56;BaseQRankSum=-1.957;DP=552;FS=4.203;HRun=3;HaplotypeScore=159.4677;InbreedingCoeff=-0.1618;MQ=42.69;MQ0=53;MQRankSum=4.817;QD=6.27;ReadPosRankSum=9.331;VQSLOD=-0.4173;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:20,0:18:2.40:76,0,2	0/1:13,0:13:28.06:112,0,28	0/0:52,0:6:6.79:0,7,62	0/0:53,0:6:4.97:0,5,91	0/1:28,0:27:48.77:102,0,49	1/1:15,0:15:33.26:177,33,0	1/1:24,0:24:28.06:132,28,0	0/0:8,0:5:8.09:0,8,47	1/1:16,0:15:2.24:173,2,0	1/1:17,0:16:1.37:147,1,0	1/1:13,0:13:8.27:103,8,0	0/1:22,1:22:39.23:200,0,39	0/1:16,0:16:3.31:167,0,3	0/1:18,0:17:3.08:122,0,3	0/0:7,0:7:14.97:0,15,210	0/1:13,0:13:27.06:63,0,27	0/0:14,0:12:18.70:0,19,447	0/0:27,0:27:53:0,53,1067	0/1:9,0:4:17.44:17,0,19	0/1:20,0:19:41.29:90,0,41	0/1:49,1:45:22.47:242,0,22	0/1:20,0:20:24.46:142,0,24	1/1:10,1:9:19.63:103,20,0	0/1:18,0:18:28.43:90,0,28	0/1:10,1:11:8.89:52,0,9	0/1:23,1:23:18.95:225,0,19	0/1:9,0:9:20.67:55,0,21	0/1:3,0:3:10.10:29,0,10
chr10	25123312	.	ATG	A	152.85	PASS	AB=0.925;AC=7;AF=0.125;AN=56;BaseQRankSum=3.492;DP=621;FS=0.817;HRun=0;HaplotypeScore=195.6642;InbreedingCoeff=0.1996;MQ=43.44;MQ0=52;MQRankSum=-5.876;QD=1.42;ReadPosRankSum=-1.636;VQSLOD=2.5915;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:11,0:20:8.06:8,0,138	0/0:13,0:13:27.09:0,27,429	0/0:62,0:11:33.03:0,33,407	0/0:61,1:10:23.22:0,23,276	0/1:28,2:29:1.71:2,0,617	0/0:23,0:23:23.14:0,23,461	0/0:26,0:27:26.70:0,27,411	0/0:15,0:11:18.30:0,18,135	0/0:17,0:16:33.08:0,33,501	0/1:16,2:17:11.25:11,0,422	0/0:16,0:16:23.20:0,23,379	0/0:22,0:21:46.07:0,46,657	0/0:18,0:18:27.88:0,28,456	0/0:17,0:18:33.05:0,33,437	1/1:0,9:9:21.02:235,21,0	0/1:16,1:17:5.88:6,0,374	0/0:14,0:12:6.02:0,6,278	0/0:25,0:25:36.32:0,36,559	0/0:9,0:5:9.03:0,9,143	0/0:23,1:23:33.02:0,33,481	0/0:46,0:42:29.77:0,30,713	0/0:22,1:23:18.19:0,18,734	0/0:13,0:11:18.03:0,18,238	0/0:21,0:21:26.65:0,27,470	0/0:16,0:16:12.04:0,12,186	0/0:24,0:24:27.65:0,28,622	0/1:12,1:13:9.21:9,0,277	0/0:3,0:3:6.02:0,6,95
chr10	25123338	.	GGTGTAT	G	13983.30	PASS	AB=0.889;AC=47;AF=0.839;AN=56;BaseQRankSum=1.823;DP=671;FS=0.000;HRun=0;HaplotypeScore=184.6189;InbreedingCoeff=0.3191;MQ=43.78;MQ0=42;MQRankSum=0.991;QD=26.04;ReadPosRankSum=2.095;VQSLOD=4.3458;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:27,1:27:21.66:160,22,0	1/1:3,8:11:33.07:628,33,0	0/0:61,0:16:8.47:0,8,474	0/0:72,0:15:19.47:0,19,405	1/1:10,17:27:57.44:927,57,0	1/1:6,18:24:51.14:1069,51,0	1/1:9,15:25:38.62:543,39,0	0/1:38,0:36:37.86:38,0,1191	1/1:7,14:21:56.92:954,57,0	0/1:7,10:17:2.55:600,0,3	1/1:5,14:22:38.10:653,38,0	1/1:11,10:21:53.95:861,54,0	1/1:10,3:13:35.83:447,36,0	1/1:5,11:18:35.95:571,36,0	1/1:18,0:18:32.78:148,33,0	1/1:5,18:24:44.19:854,44,0	0/1:14,0:11:66.87:67,0,99	0/1:20,0:20:74.69:75,0,253	1/1:3,6:7:14.24:273,14,0	1/1:6,24:29:72.14:1362,72,0	0/1:28,6:32:77.79:293,0,78	1/1:9,14:23:45.10:826,45,0	1/1:6,6:11:23.73:416,24,0	1/1:10,15:25:26.78:490,27,0	1/1:5,12:17:32.66:516,33,0	1/1:15,2:18:44.95:577,45,0	1/1:3,13:16:29.72:545,30,0	1/1:1,2:3:6:92,6,0
chr10	25123339	.	GTGTA	G	9269.76	PASS	AB=0.993;AC=48;AF=0.857;AN=56;BaseQRankSum=5.079;DP=673;FS=1.135;HRun=0;HaplotypeScore=187.0162;InbreedingCoeff=0.3410;MQ=43.76;MQ0=42;MQRankSum=1.335;QD=17.26;ReadPosRankSum=1.469;VQSLOD=4.7881;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:12,16:27:0.37:564,0,0	1/1:11,0:11:33.05:345,33,0	0/0:63,0:17:11.47:0,11,455	0/0:73,0:15:16.46:0,16,338	1/1:27,0:27:59.44:556,59,0	1/1:24,0:24:52.66:554,53,0	1/1:24,1:25:39.02:400,39,0	0/1:43,0:37:42.29:42,0,745	1/1:21,0:21:53.91:523,54,0	1/1:19,0:17:21.93:371,22,0	1/1:22,0:22:33.26:311,33,0	1/1:20,0:20:53.90:509,54,0	1/1:13,0:13:35.80:312,36,0	1/1:18,0:18:35.94:355,36,0	1/1:2,16:18:39.13:705,39,0	1/1:23,0:23:44.55:463,45,0	0/1:13,0:10:57.20:66,0,57	0/1:20,0:20:97.47:97,0,149	1/1:9,0:7:14.32:146,14,0	1/1:31,0:30:64.16:692,64,0	0/1:35,1:32:22.14:209,0,22	1/1:24,0:23:44.25:417,44,0	1/1:12,0:11:23.81:244,24,0	1/1:25,0:25:26.87:279,27,0	1/1:17,1:17:32.75:331,33,0	1/1:18,0:18:44.94:422,45,0	1/1:16,0:16:29.76:299,30,0	1/1:3,0:3:6:57,6,0
chr10	25126926	.	T	TATTTATTTATTTATTTATTT	10600.83	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=3.062;DP=263;FS=12.258;HRun=0;HaplotypeScore=100.6153;InbreedingCoeff=0.5786;MQ=66.32;MQ0=0;MQRankSum=-3.718;QD=51.46;ReadPosRankSum=-2.432;VQSLOD=2.2301;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:69.18:0,69,2177	1/1:0,0:4:12.04:460,12,0	0/0:2,0:2:2.69:0,3,40	0/0:5,0:5:3.76:0,4,63	1/1:0,0:11:24.90:328,25,0	1/1:0,0:12:6.02:399,6,0	1/1:1,0:8:21.07:597,21,0	1/1:0,0:21:55.05:1361,55,0	1/1:0,0:4:6.02:399,6,0	1/1:0,0:12:25.42:642,25,0	1/1:0,0:5:9.03:287,9,0	1/1:1,0:11:21.07:769,21,0	1/1:1,0:8:6.02:399,6,0	1/1:0,0:8:3.01:205,3,0	1/1:0,2:12:3.01:259,3,0	1/1:1,0:6:6.02:410,6,0	0/0:25,0:25:72.23:0,72,2985	0/0:2,0:2:6.02:0,6,209	1/1:0,0:14:42.14:1016,42,0	1/1:1,0:10:14.98:352,15,0	1/1:1,0:3:9.03:216,9,0	1/1:0,0:2:3.01:194,3,0	1/1:0,0:4:6.41:223,6,0	1/1:1,0:3:3.01:44,3,0	1/1:0,0:12:3.01:205,3,0	1/1:0,0:4:12.04:402,12,0	1/1:2,0:20:12.04:820,12,0	1/1:0,0:7:9.03:615,9,0
chr10	25128034	.	AAGAATTAAACTAAAG	A	827.88	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=4.410;DP=621;FS=5.822;HRun=0;HaplotypeScore=244.5811;InbreedingCoeff=0.9441;MQ=87.29;MQ0=0;MQRankSum=-4.502;QD=75.26;ReadPosRankSum=1.317;VQSLOD=2.4336;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:78.27:0,78,5306	0/0:5,0:5:15.05:0,15,1090	0/0:26,0:26:75.17:0,75,4441	0/0:16,0:16:36.12:0,36,2004	0/0:25,0:25:72.23:0,72,4623	0/0:29,0:29:87.30:0,87,5710	0/0:21,0:21:60.21:0,60,3637	0/0:33,0:33:96.32:0,96,6394	0/0:19,0:19:57.20:0,57,4148	0/0:29,0:29:87.30:0,87,6305	0/0:34,0:34:99:0,102,6833	0/0:22,0:22:63.22:0,63,4255	0/0:25,0:25:72.23:0,72,4698	0/0:20,0:20:60.21:0,60,3767	0/0:19,0:19:51.17:0,51,3634	0/0:20,0:20:60.21:0,60,4022	1/1:2,6:8:12.04:535,12,0	1/1:0,3:3:9.03:401,9,0	0/0:18,0:18:51.17:0,51,3371	0/0:27,0:27:78.27:0,78,5584	0/0:19,0:19:51.18:0,51,3709	0/0:25,0:25:75.26:0,75,5266	0/0:26,0:26:75.26:0,75,5073	0/0:15,0:15:42.14:0,42,2645	0/0:32,0:32:93.31:0,93,6047	0/0:26,0:26:78.27:0,78,5552	0/0:41,0:41:99:0,123,8138	0/0:11,0:11:33.11:0,33,2138
chr10	25128967	.	ACTAGCCAT	A	36531.12	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=15.924;DP=693;FS=3.990;HRun=0;HaplotypeScore=261.6389;InbreedingCoeff=0.9876;MQ=82.42;MQ0=0;MQRankSum=-19.435;QD=77.07;ReadPosRankSum=7.564;VQSLOD=4.4541;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,147,6282	1/1:1,11:12:27.09:790,27,0	0/0:35,0:35:99:0,105,4251	0/0:33,0:33:90.78:0,91,3851	1/1:1,21:22:63.22:1839,63,0	1/1:2,30:32:84.29:2458,84,0	1/1:1,22:23:60.21:1756,60,0	0/0:41,0:41:99:0,120,4841	1/1:0,35:35:99:2985,102,0	1/1:3,23:26:69.24:2019,69,0	1/1:2,14:16:42.14:1229,42,0	1/1:1,34:35:84.29:2454,84,0	1/1:1,30:31:90.31:2634,90,0	1/1:3,23:26:69.71:2020,70,0	0/0:29,0:29:84.29:0,84,3498	1/1:0,21:21:63.22:1844,63,0	0/0:15,0:15:45.15:0,45,2039	0/0:16,0:16:45.15:0,45,1944	1/1:1,15:16:45.14:1150,45,0	1/1:0,28:28:81.28:2371,81,0	1/1:4,9:13:18.06:524,18,0	1/1:2,22:24:66.23:1929,66,0	1/1:1,15:16:41.50:1222,42,0	1/1:3,12:15:26.83:770,27,0	1/1:1,22:23:63.22:1839,63,0	1/1:0,31:31:93.32:2723,93,0	1/1:5,20:25:60.21:1713,60,0	1/1:0,4:4:9.03:263,9,0
chr10	25129414	.	TAATC	T	833.11	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-4.472;DP=592;FS=4.440;HRun=0;HaplotypeScore=173.6853;InbreedingCoeff=0.8419;MQ=75.44;MQ0=3;MQRankSum=-3.912;QD=37.87;ReadPosRankSum=-3.093;VQSLOD=3.2437;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,102,2251	0/0:12,0:12:36.11:0,36,864	0/0:29,0:20:57.18:0,57,1336	0/0:26,0:24:57.61:0,58,1320	0/0:22,0:22:63.21:0,63,1454	0/0:23,0:23:60.19:0,60,1503	0/0:28,0:28:84.27:0,84,2016	1/1:1,21:21:54.14:928,54,0	0/0:30,0:30:84.27:0,84,1939	0/0:22,0:22:60.19:0,60,1471	0/0:15,0:15:37.66:0,38,751	0/0:12,0:12:30.10:0,30,758	0/0:28,0:28:83.74:0,84,1900	0/0:19,0:19:44.52:0,45,962	0/0:15,0:15:45.15:0,45,1010	0/0:24,0:24:72.22:0,72,1685	0/0:26,0:26:61.15:0,61,1416	0/0:9,0:9:7.42:0,7,490	0/0:9,0:9:27.07:0,27,592	0/0:22,0:22:60.21:0,60,1532	0/0:27,0:27:69.13:0,69,1643	0/0:23,0:23:63.12:0,63,1293	0/0:21,0:21:56.09:0,56,1403	0/0:22,0:22:63.18:0,63,1496	0/0:18,0:18:54.12:0,54,1280	0/0:25,0:25:71.71:0,72,1541	0/0:19,0:19:47.74:0,48,1093	0/0:4,0:4:6.02:0,6,162
chr10	25129426	.	GCACA	G	7319.97	PASS	AB=0.720;AC=43;AF=0.896;AN=48;BaseQRankSum=-0.467;DP=566;FS=5.740;HRun=0;HaplotypeScore=137.5702;InbreedingCoeff=0.6563;MQ=64.96;MQ0=10;MQRankSum=1.841;QD=15.51;ReadPosRankSum=2.310;VQSLOD=3.9227;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:39:24.03:223,24,0	1/1:7,3:11:12.03:169,12,0	./.	./.	1/1:11,8:21:12.46:286,12,0	1/1:14,5:20:15.04:216,15,0	1/1:20,7:26:18.06:283,18,0	0/0:25,0:23:15.02:0,15,201	1/1:11,12:28:48.13:658,48,0	1/1:11,6:18:18.04:244,18,0	1/1:6,6:14:24.07:331,24,0	1/1:4,9:14:8.59:270,9,0	1/1:15,12:28:45.15:680,45,0	1/1:5,10:17:8.11:395,8,0	1/1:8,0:14:18.02:168,18,0	1/1:16,3:24:20.60:387,21,0	1/1:18,0:28:12.01:112,12,0	0/0:9,0:9:4.78:0,5,25	./.	1/1:15,4:20:15.04:216,15,0	1/1:15,11:26:21.07:330,21,0	0/1:11,2:18:1.43:242,0,1	1/1:14,5:20:15.04:216,15,0	1/1:8,19:27:48.16:754,48,0	1/1:10,7:18:11.14:317,11,0	1/1:13,10:23:33.11:510,33,0	1/1:7,9:17:20.90:311,21,0	./.
chr10	25129596	.	CTGTT	C	5032.72	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=6.844;DP=705;FS=3.768;HRun=0;HaplotypeScore=125.9783;InbreedingCoeff=0.9785;MQ=80.10;MQ0=0;MQRankSum=-5.140;QD=49.83;ReadPosRankSum=4.027;VQSLOD=5.8250;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,40:40:99:2068,108,0	0/0:5,0:5:15.05:0,15,411	0/0:26,0:26:78.27:0,78,2082	0/0:20,0:20:60.16:0,60,1518	0/0:35,0:35:99:0,105,2757	0/0:31,0:31:90.31:0,90,2420	0/0:29,0:29:84.23:0,84,2083	0/0:44,0:44:99:0,120,3284	0/0:33,0:33:99:0,99,2708	0/0:29,0:29:84.29:0,84,2278	0/0:19,0:19:54.19:0,54,1481	0/0:24,0:24:69.24:0,69,1890	0/0:29,0:29:81.25:0,81,2016	0/0:25,0:25:75.26:0,75,1970	1/1:1,28:29:75.26:1453,75,0	0/0:25,0:25:69.24:0,69,1883	1/1:1,28:29:69.24:1337,69,0	1/1:0,3:3:9.03:174,9,0	0/0:19,0:19:54.19:0,54,1455	0/0:32,0:32:93.32:0,93,2542	0/0:11,0:11:33.11:0,33,904	0/0:29,0:29:84.27:0,84,2217	0/0:35,0:35:99:0,105,2820	0/0:9,0:9:24.08:0,24,658	0/0:18,0:18:54.19:0,54,1472	0/0:29,0:29:84.28:0,84,2219	0/0:35,0:35:99:0,102,2738	0/0:13,0:13:39.13:0,39,999
chr10	25132074	.	GA	G	9715.84	PASS	AB=0.702;AC=52;AF=0.929;AN=56;BaseQRankSum=-4.446;DP=623;FS=13.559;HRun=11;HaplotypeScore=83.4980;InbreedingCoeff=0.4748;MQ=74.84;MQ0=0;MQRankSum=-5.278;QD=15.95;ReadPosRankSum=5.212;VQSLOD=4.3241;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,0:23:36.66:106,37,0	1/1:2,12:14:29.92:241,30,0	0/1:13,3:14:28.14:28,0,184	0/0:13,0:13:20.73:0,21,229	1/1:8,30:37:77.81:634,78,0	1/1:3,21:25:29.98:442,30,0	1/1:4,13:17:32.96:271,33,0	1/1:6,0:28:39.05:108,39,0	1/1:4,20:26:61.01:480,61,0	1/1:5,23:28:34.31:485,34,0	1/1:11,14:25:32.92:271,33,0	1/1:4,19:23:56.91:468,57,0	1/1:2,35:37:95.88:788,96,0	1/1:5,15:20:44.94:369,45,0	1/1:2,11:14:30.43:247,30,0	1/1:4,27:31:77.89:640,78,0	1/1:1,0:18:28.51:82,29,0	1/1:1,0:13:18.33:53,18,0	1/1:4,18:22:44.93:443,45,0	1/1:3,23:26:64.85:515,65,0	1/1:3,18:21:41.94:345,42,0	1/1:4,28:32:80.89:665,81,0	1/1:0,19:19:47.94:394,48,0	0/1:2,7:9:8.01:148,0,8	1/1:0,16:17:40.99:326,41,0	1/1:7,21:28:59.82:483,60,0	1/1:4,28:32:36.91:510,37,0	1/1:0,7:7:20.98:172,21,0
chr10	25132449	.	A	AAAG	288.85	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.749;DP=533;FS=8.215;HRun=0;HaplotypeScore=94.4558;InbreedingCoeff=0.7757;MQ=54.28;MQ0=7;MQRankSum=-3.357;QD=24.07;ReadPosRankSum=-1.910;VQSLOD=2.5911;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:72.01:0,72,1103	0/0:2,0:2:3.01:0,3,47	0/0:19,0:6:17.19:0,17,214	0/0:21,0:9:9.50:0,10,176	0/0:22,0:22:54.18:0,54,856	0/0:23,0:21:53.84:0,54,856	0/0:18,0:18:51.15:0,51,784	1/1:7,5:11:18.06:379,18,0	0/0:28,0:28:66.70:0,67,1035	0/0:24,0:24:54.18:0,54,849	0/0:16,0:16:36.12:0,36,570	0/0:15,0:15:39.13:0,39,618	0/0:21,0:21:57.19:0,57,902	0/0:18,0:17:36.07:0,36,571	0/0:28,0:27:60.35:0,60,536	0/0:19,0:19:45.15:0,45,714	0/0:29,0:29:64.58:0,65,1096	0/0:13,0:13:36.12:0,36,560	0/0:14,0:12:21.04:0,21,307	0/0:19,0:19:42.13:0,42,643	0/0:26,0:26:63.21:0,63,997	0/0:12,0:12:33.11:0,33,523	0/0:17,0:17:42.13:0,42,665	0/0:21,0:20:45.10:0,45,655	0/0:21,0:20:48.15:0,48,739	0/0:23,0:23:59.26:0,59,823	0/0:15,0:15:33.10:0,33,523	0/0:6,0:6:12.04:0,12,202
chr10	25132511	.	GGAAGGAAT	G	6402.80	PASS	AB=0.994;AC=33;AF=0.589;AN=56;BaseQRankSum=-6.069;DP=578;FS=114.020;HRun=0;HaplotypeScore=152.7027;InbreedingCoeff=-0.3139;MQ=58.61;MQ0=13;MQRankSum=0.225;QD=12.20;ReadPosRankSum=-1.310;VQSLOD=-0.6292;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:28,1:29:69.71:596,70,0	1/1:9,0:9:2.02:63,2,0	0/0:16,0:13:36.02:0,36,374	0/0:13,0:9:23.98:0,24,246	1/1:2,17:19:3.83:134,4,0	0/1:19,0:19:99:294,0,174	1/1:21,0:21:47.63:378,48,0	1/1:15,0:11:32.90:275,33,0	0/1:25,1:25:62.78:376,0,63	0/1:22,0:21:99:327,0,279	0/1:15,0:15:99:143,0,177	0/1:19,0:19:99:205,0,259	0/1:28,0:28:99:301,0,479	0/0:24,0:23:5.79:0,6,37	0/1:26,0:24:99:272,0,136	1/1:15,0:15:2.96:19,3,0	0/1:35,0:35:99:356,0,238	0/1:17,0:17:96.57:97,0,344	0/1:19,0:14:17.88:239,0,18	0/1:27,0:26:57.35:191,0,57	1/1:36,0:35:12.90:420,13,0	0/1:18,0:18:21.67:216,0,22	0/1:16,0:16:56.47:231,0,56	0/1:17,0:16:31.98:154,0,32	0/1:22,0:22:99:359,0,145	1/1:21,1:21:36.73:439,37,0	0/1:17,0:16:7.83:8,0,8	0/1:15,1:16:16.77:310,0,17
chr10	25132515	.	GGAAT	G	8173.93	PASS	AB=0.991;AC=43;AF=0.768;AN=56;BaseQRankSum=-4.944;DP=581;FS=55.089;HRun=0;HaplotypeScore=113.9317;InbreedingCoeff=0.0145;MQ=62.68;MQ0=9;MQRankSum=-1.429;QD=14.97;ReadPosRankSum=1.847;VQSLOD=2.3818;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:27:71.74:496,72,0	1/1:0,9:9:14.83:132,15,0	0/0:19,0:16:44.30:0,44,458	0/0:16,0:12:32.78:0,33,332	1/1:17,1:18:26.33:159,26,0	0/1:18,0:18:80.32:295,0,80	1/1:22,0:22:59.37:455,59,0	1/1:15,0:11:32.90:275,33,0	1/1:22,5:26:61.54:609,62,0	0/1:23,0:23:92.51:399,0,93	0/1:14,0:14:98.88:170,0,99	0/1:19,0:19:99:229,0,169	0/1:28,0:28:99:381,0,237	1/1:1,23:23:3.01:57,3,0	0/1:25,0:23:23.51:310,0,24	1/1:0,15:15:2.96:19,3,0	0/1:38,0:38:24.94:454,0,25	0/1:16,0:16:99:120,0,155	1/1:3,12:14:32.95:275,33,0	1/1:2,25:26:48.18:373,48,0	1/1:37,0:36:71.71:607,72,0	1/1:17,0:17:0.93:273,1,0	1/1:17,0:17:2.85:296,3,0	1/1:15,0:15:23.87:241,24,0	0/1:21,2:23:17.29:517,0,17	1/1:1,21:22:62.55:596,63,0	1/1:0,18:18:5.64:71,6,0	1/1:16,0:16:38.96:366,39,0
chr10	25132738	.	A	AT	1042.65	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-4.880;DP=686;FS=0.651;HRun=7;HaplotypeScore=75.5931;InbreedingCoeff=0.9391;MQ=76.15;MQ0=0;MQRankSum=-0.929;QD=25.43;ReadPosRankSum=2.553;VQSLOD=4.3479;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:87.12:0,87,840	0/0:14,0:14:36.04:0,36,342	0/0:9,0:10:5.07:0,5,184	0/0:18,0:18:33:0,33,308	0/0:31,0:31:93.13:0,93,892	0/0:34,0:34:96.14:0,96,921	0/0:20,0:20:48.05:0,48,457	0/0:35,0:44:99:0,103,602	0/0:31,0:31:84.10:0,84,798	0/0:25,0:25:75.12:0,75,721	0/0:28,0:28:72.11:0,72,695	0/0:23,0:23:57.08:0,57,550	0/0:26,0:26:63.09:0,63,608	0/0:26,0:26:63.05:0,63,597	0/0:39,0:39:99:0,111,1071	0/0:19,0:19:48.08:0,48,464	1/1:4,16:20:38.99:450,39,0	1/1:1,20:21:60.18:715,60,0	0/0:23,0:23:69.11:0,69,666	0/0:19,0:19:45.06:0,45,429	0/0:28,0:28:75.11:0,75,724	0/0:22,0:22:53.96:0,54,508	0/0:17,0:17:45.07:0,45,434	0/0:23,0:23:69.09:0,69,659	0/0:28,0:28:78.10:0,78,745	0/0:20,0:20:48.06:0,48,459	0/0:29,0:28:78.08:0,78,744	0/0:15,0:15:33.04:0,33,318
chr10	25133078	.	CT	C	1378.09	PASS	AB=0.929;AC=7;AF=0.125;AN=56;BaseQRankSum=8.455;DP=562;FS=0.000;HRun=8;HaplotypeScore=58.7724;InbreedingCoeff=0.8531;MQ=84.95;MQ0=0;MQRankSum=-1.362;QD=15.48;ReadPosRankSum=-2.109;VQSLOD=3.1369;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:20.77:0,21,154	0/0:10,0:10:27.08:0,27,326	0/1:23,1:26:0.66:1,0,389	0/0:22,0:22:34.25:0,34,424	0/0:31,0:31:84.25:0,84,1003	0/0:28,0:28:78.20:0,78,909	0/0:18,0:18:48.12:0,48,558	1/1:4,29:33:84.06:795,84,0	0/0:12,0:12:36.11:0,36,435	0/0:26,0:26:66.20:0,66,789	0/0:30,0:30:81.25:0,81,978	0/0:9,0:9:24.07:0,24,290	0/0:22,0:22:66.19:0,66,786	0/0:14,0:14:39.10:0,39,449	0/0:19,0:19:51.14:0,51,604	0/0:18,0:18:54.13:0,54,620	1/1:0,15:15:42.07:406,42,0	1/1:3,12:15:33.05:319,33,0	0/0:13,0:13:33.09:0,33,390	0/0:22,0:22:60.17:0,60,704	0/0:17,0:16:45.14:0,45,544	0/0:29,0:29:84.23:0,84,992	0/0:24,0:24:66.19:0,66,788	0/0:15,0:15:39.11:0,39,460	0/0:24,0:24:66.20:0,66,797	0/0:22,0:22:54.17:0,54,652	0/0:32,0:32:87.24:0,87,1020	0/0:2,0:2:3.01:0,3,36
chr10	25133427	.	CTTCAA	C	2072.11	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=8.855;DP=528;FS=9.871;HRun=0;HaplotypeScore=96.1494;InbreedingCoeff=0.9578;MQ=87.65;MQ0=0;MQRankSum=-8.720;QD=40.63;ReadPosRankSum=-0.782;VQSLOD=2.8381;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,9:10:21.07:456,21,0	0/0:6,0:6:18.06:0,18,551	0/0:28,0:28:84.26:0,84,2483	0/0:13,0:13:33.11:0,33,894	0/0:30,0:30:90.31:0,90,2879	0/0:25,0:25:75.26:0,75,2497	0/0:26,0:26:78.27:0,78,2543	1/1:0,14:14:36.12:804,36,0	0/0:18,0:18:54.19:0,54,1786	0/0:21,0:21:63.22:0,63,2041	0/0:22,0:22:66.23:0,66,2131	0/0:21,0:21:63.22:0,63,2071	0/0:21,0:21:63.20:0,63,2023	0/0:23,0:23:69.24:0,69,2270	1/1:0,17:17:27.09:628,27,0	0/0:25,0:25:75.26:0,75,2468	1/1:0,4:4:9.03:209,9,0	1/1:1,5:6:6.02:140,6,0	0/0:21,0:21:63.21:0,63,1917	0/0:14,0:14:42.14:0,42,1399	0/0:14,0:14:39.13:0,39,1268	0/0:19,0:19:57.20:0,57,1847	0/0:20,0:20:60.19:0,60,1868	0/0:19,0:19:57.20:0,57,1861	0/0:20,0:20:60.21:0,60,1953	0/0:33,0:33:99:0,99,3228	0/0:27,0:27:81.28:0,81,2599	0/0:11,0:11:30.10:0,30,945
chr10	25133551	.	G	GA	2203.65	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=11.051;DP=505;FS=12.442;HRun=2;HaplotypeScore=62.1640;InbreedingCoeff=0.9908;MQ=92.89;MQ0=0;MQRankSum=-4.749;QD=31.48;ReadPosRankSum=-1.600;VQSLOD=1.6640;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,15:15:33.08:452,33,0	0/0:10,0:10:30.09:0,30,372	0/0:26,0:26:71.85:0,72,828	0/0:20,0:20:12.24:0,12,385	0/0:18,0:18:51.16:0,51,632	0/0:27,0:26:78.24:0,78,966	0/0:15,0:15:45.14:0,45,558	1/1:3,15:18:39.12:544,39,0	0/0:17,0:17:51.13:0,51,606	0/0:19,0:19:51.16:0,51,632	0/0:15,0:15:45.14:0,45,558	0/0:23,0:23:66.21:0,66,818	0/0:21,0:21:60.19:0,60,743	0/0:16,0:16:48.15:0,48,595	1/1:0,10:10:30.10:432,30,0	0/0:25,0:25:75.21:0,75,905	1/1:0,16:16:48.16:691,48,0	1/1:1,10:11:17.93:259,18,0	0/0:20,0:20:60.16:0,60,709	0/0:21,0:21:63.20:0,63,781	0/0:19,0:19:57.18:0,57,706	0/0:19,0:19:51.15:0,51,620	0/0:18,0:18:54.17:0,54,669	0/0:16,0:16:45.12:0,45,544	0/0:12,0:12:36.11:0,36,446	0/0:22,0:22:66.19:0,66,795	0/0:23,0:23:66.21:0,66,818	0/0:13,0:13:36.11:0,36,446
chr10	25133732	.	CA	C	409.07	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.448;DP=303;FS=3.197;HRun=4;HaplotypeScore=49.3648;InbreedingCoeff=0.8499;MQ=100.84;MQ0=0;MQRankSum=-2.590;QD=27.27;ReadPosRankSum=-2.954;VQSLOD=1.5900;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:33.11:0,33,462	0/0:2,0:2:6.02:0,6,84	0/0:14,0:15:38.87:0,39,469	0/0:19,0:19:56.97:0,57,693	0/0:13,0:13:39.13:0,39,544	0/0:11,0:11:27.09:0,27,378	0/0:11,0:11:27.09:0,27,376	1/1:0,15:15:42.13:504,42,0	0/0:10,0:9:27.09:0,27,377	0/0:13,0:13:39.13:0,39,533	0/0:12,0:12:27.09:0,27,378	0/0:7,0:7:21.07:0,21,294	0/0:10,0:10:30.10:0,30,420	0/0:7,0:7:21.06:0,21,277	0/0:6,0:6:15.01:0,15,188	0/0:16,0:16:48.13:0,48,638	0/0:20,0:20:57.19:0,57,793	0/0:13,0:13:36.12:0,36,504	0/0:5,0:5:15.05:0,15,209	0/0:8,0:8:21.07:0,21,294	0/0:6,0:6:18.06:0,18,252	0/0:6,0:6:18.06:0,18,252	0/0:13,0:13:39.13:0,39,546	0/0:7,0:7:21.07:0,21,293	0/0:11,0:11:30.10:0,30,419	0/0:9,0:9:27.09:0,27,378	0/0:14,0:14:42.13:0,42,571	0/0:13,0:13:36.12:0,36,504
chr10	25133778	.	CATTATATAT	C	201.64	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=2.779;DP=195;FS=7.359;HRun=0;HaplotypeScore=59.0537;InbreedingCoeff=0.5450;MQ=92.50;MQ0=4;MQRankSum=-2.470;QD=13.44;ReadPosRankSum=1.005;VQSLOD=0.6849;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:5:10.56:0,11,156	0/0:2,0:2:6.02:0,6,294	0/0:11,0:10:20.99:0,21,184	0/0:24,0:13:23.53:0,24,186	0/0:8,0:8:24.01:0,24,566	0/0:6,0:6:15.02:0,15,371	0/0:3,0:3:9.02:0,9,319	1/1:9,0:9:4.52:24,5,0	0/0:5,0:5:15.01:0,15,368	0/0:6,0:6:15.04:0,15,404	0/0:5,0:5:12:0,12,223	0/0:4,0:4:12.01:0,12,225	0/0:4,0:4:12.01:0,12,344	0/0:3,0:3:6.02:0,6,294	1/1:2,4:6:9.03:277,9,0	0/0:13,0:13:39.05:0,39,1082	0/0:15,0:15:41.24:0,41,977	0/0:14,0:14:42.02:0,42,1073	0/0:6,0:6:18.02:0,18,342	0/0:5,0:5:15.01:0,15,369	0/0:2,0:2:6:0,6,171	0/0:4,0:4:9:0,9,171	0/0:4,0:4:11.99:0,12,100	0/0:2,0:2:6:0,6,171	0/0:4,0:4:12.02:0,12,278	0/0:2,0:2:3:0,3,27	0/0:9,0:9:26.96:0,27,581	0/0:13,0:13:35.87:0,36,720
chr10	25133822	.	T	TTA	1285.81	PASS	AC=6;AF=0.111;AN=54;BaseQRankSum=3.937;DP=188;FS=15.763;HRun=0;HaplotypeScore=29.0192;InbreedingCoeff=0.6773;MQ=86.87;MQ0=3;MQRankSum=-2.014;QD=34.75;ReadPosRankSum=3.003;VQSLOD=4.2897;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,6:6:12.04:204,12,0	0/0:3,0:3:9.03:0,9,116	0/0:11,0:7:7.82:0,8,68	0/0:18,0:10:4.64:0,5,32	0/0:11,0:11:24.06:0,24,285	0/0:2,0:2:6.02:0,6,78	0/0:3,0:3:6.01:0,6,64	./.	0/0:3,0:3:6.02:0,6,78	0/0:4,0:4:12.04:0,12,156	0/0:4,0:4:12.04:0,12,155	0/0:3,0:3:9.03:0,9,117	0/0:4,0:4:12.04:0,12,156	0/0:4,0:4:12.04:0,12,156	0/0:8,0:8:21.07:0,21,273	0/0:10,0:10:30.07:0,30,361	1/1:1,13:14:27.09:459,27,0	1/1:2,14:17:45.15:759,45,0	0/0:6,0:6:18.05:0,18,222	0/0:10,0:10:30.10:0,30,390	0/0:3,0:3:3.01:0,3,39	0/0:2,0:2:6.02:0,6,78	0/0:4,0:4:12.03:0,12,145	0/0:4,0:4:12.04:0,12,156	0/0:7,0:7:18.04:0,18,218	0/0:8,0:8:24.08:0,24,312	0/0:10,0:10:27.07:0,27,334	0/0:8,0:8:24.08:0,24,311
chr10	25134620	.	G	GT	17483.75	PASS	AC=50;AF=0.926;AN=54;BaseQRankSum=-1.482;DP=534;FS=1.700;HRun=0;HaplotypeScore=90.3740;InbreedingCoeff=0.9621;MQ=74.57;MQ0=0;MQRankSum=-7.963;QD=34.42;ReadPosRankSum=5.293;VQSLOD=4.2944;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,14:15:39.13:532,39,0	1/1:0,5:5:9.03:125,9,0	0/0:16,0:16:27.10:0,27,571	0/0:10,0:10:27.03:0,27,328	1/1:1,36:37:84.28:1153,84,0	1/1:0,31:31:78.26:1066,78,0	1/1:4,13:17:35.51:465,36,0	./.	1/1:1,13:14:39.13:537,39,0	1/1:1,28:29:87.28:1186,87,0	1/1:1,12:13:16.30:214,16,0	1/1:1,13:14:36.12:483,36,0	1/1:2,22:24:48.63:652,49,0	1/1:1,18:19:54.18:744,54,0	1/1:0,15:15:42.14:569,42,0	1/1:1,14:15:39.13:532,39,0	1/1:0,28:28:78.26:1086,78,0	1/1:0,13:13:33.11:454,33,0	1/1:4,25:29:78.26:1080,78,0	1/1:0,32:32:86.67:1141,87,0	1/1:0,14:14:36.12:499,36,0	1/1:1,19:20:48.16:662,48,0	1/1:0,24:24:56.66:782,57,0	1/1:0,11:11:30.10:411,30,0	1/1:1,27:28:75.25:1034,75,0	1/1:1,27:28:84.18:1122,84,0	1/1:2,19:21:47:631,47,0	1/1:0,12:12:24.08:325,24,0
chr10	25134621	.	G	GTT	11942.78	PASS	AC=50;AF=0.926;AN=54;BaseQRankSum=1.785;DP=536;FS=1.630;HRun=2;HaplotypeScore=121.3607;InbreedingCoeff=0.9778;MQ=75.17;MQ0=0;MQRankSum=-8.193;QD=23.46;ReadPosRankSum=4.771;VQSLOD=3.5854;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:14,1:15:38.95:345,39,0	1/1:5,0:5:11.98:108,12,0	0/0:17,0:17:30.16:0,30,601	0/0:10,0:10:30.09:0,30,384	1/1:36,1:37:83.72:721,84,0	1/1:31,0:31:77.93:702,78,0	1/1:15,1:17:35.40:322,35,0	./.	1/1:14,0:14:41.96:381,42,0	1/1:30,0:30:86.92:811,87,0	1/1:12,0:12:17.96:156,18,0	1/1:13,1:14:36.02:366,36,0	1/1:23,0:23:47.98:448,48,0	1/1:19,0:19:54:501,54,0	1/1:16,0:16:42:392,42,0	1/1:15,0:15:38.98:354,39,0	1/1:28,0:28:70.45:708,70,0	1/1:13,0:13:33.04:315,33,0	1/1:29,0:29:84.13:827,84,0	1/1:32,0:32:86.60:712,87,0	1/1:13,0:13:36.06:354,36,0	1/1:21,0:21:47.92:432,48,0	1/1:24,0:24:62.75:520,63,0	1/1:11,0:11:30.01:283,30,0	1/1:28,0:28:77.84:697,78,0	1/1:27,1:28:84.02:813,84,0	1/1:23,0:23:53.79:459,54,0	1/1:11,0:11:24:215,24,0
chr10	25134736	.	TCTC	T	7374.76	PASS	AB=0.533;AC=49;AF=0.907;AN=54;BaseQRankSum=3.571;DP=595;FS=0.612;HRun=0;HaplotypeScore=126.3434;InbreedingCoeff=0.7417;MQ=64.28;MQ0=12;MQRankSum=-3.748;QD=13.73;ReadPosRankSum=6.540;VQSLOD=4.0721;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:19:42.54:307,43,0	1/1:12,0:12:32.73:236,33,0	0/0:35,0:25:53.15:0,53,582	0/0:23,0:16:12.10:0,12,258	1/1:33,1:32:60.96:482,61,0	0/1:4,28:32:10.89:33,0,11	1/1:18,1:16:47.76:366,48,0	./.	1/1:22,1:20:40.24:290,40,0	1/1:23,0:20:11.80:292,12,0	1/1:17,0:16:12.97:259,13,0	1/1:25,3:26:53.77:419,54,0	1/1:20,0:19:44.61:340,45,0	1/1:16,0:14:15.29:196,15,0	1/1:21,0:17:35.70:269,36,0	1/1:18,1:19:35.68:275,36,0	1/1:37,1:34:38.67:408,39,0	1/1:16,0:14:29.88:231,30,0	1/1:17,0:15:26.67:225,27,0	1/1:24,0:23:58.08:414,58,0	1/1:14,0:14:35.87:287,36,0	1/1:18,0:17:17.67:228,18,0	1/1:14,1:12:29.74:212,30,0	1/1:13,0:9:13.55:115,14,0	1/1:18,1:18:40.09:294,40,0	1/1:23,0:20:41.65:366,42,0	1/1:33,0:32:79.98:584,80,0	1/1:19,2:21:29.96:247,30,0
chr10	25134833	.	CTTG	C	2589.71	PASS	AB=0.938;AC=20;AF=0.385;AN=52;BaseQRankSum=2.914;DP=1110;FS=4.471;HRun=0;HaplotypeScore=262.3388;InbreedingCoeff=-0.6136;MQ=25.28;MQ0=128;MQRankSum=-1.487;QD=2.85;ReadPosRankSum=-2.618;VQSLOD=1.6054;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:22:6.13:0,6,410	0/1:18,0:14:99:114,0,233	0/0:2,0:1:2.74:0,3,12	0/0:1,0:1:2.98:0,3,22	0/1:64,7:63:99:215,0,660	0/1:27,1:22:57.06:57,0,311	0/1:37,7:23:99:109,0,269	./.	0/1:57,2:28:29.58:30,0,285	0/1:64,12:61:99:450,0,1505	0/1:30,15:37:51.57:52,0,412	0/1:39,1:26:47.62:48,0,338	0/1:29,2:22:34.51:35,0,410	0/1:29,1:23:40.95:41,0,316	0/1:33,0:20:13.92:14,0,243	0/0:38,0:29:6.75:0,7,363	0/0:54,0:24:8.96:0,9,123	./.	0/1:12,0:6:10.79:11,0,57	0/1:64,3:61:99:177,0,1126	0/1:10,0:2:0:0,0,0	0/1:51,3:49:99:159,0,594	0/1:56,10:59:99:535,0,568	0/1:37,0:12:4.62:5,0,71	0/1:60,3:53:99:246,0,382	0/1:63,4:42:99:205,0,1062	0/1:51,8:45:99:229,0,965	0/0:35,0:27:11.35:0,11,246
chr10	25134872	.	CTTG	C	1921.82	PASS	AB=0.930;AC=16;AF=0.320;AN=50;BaseQRankSum=1.227;DP=1113;FS=26.551;HRun=0;HaplotypeScore=274.7600;InbreedingCoeff=-0.4948;MQ=23.60;MQ0=148;MQRankSum=-1.345;QD=2.69;ReadPosRankSum=-0.127;VQSLOD=1.2938;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:27:35.09:0,35,567	0/0:31,0:25:43.16:0,43,262	./.	./.	0/1:64,6:60:99:183,0,322	0/1:19,4:14:99:141,0,108	0/0:45,0:23:6.71:0,7,189	./.	0/0:63,0:33:26.33:0,26,342	0/1:59,6:52:99:412,0,466	0/1:33,2:32:99:103,0,201	0/1:37,1:21:82.70:83,0,278	0/1:34,2:26:99:107,0,106	0/1:26,14:26:74.76:75,0,292	0/1:30,0:19:26.49:96,0,26	0/1:23,2:18:9.79:72,0,10	0/0:61,0:30:3.02:0,3,265	0/1:39,0:17:4.27:4,0,99	0/0:17,0:7:7.73:0,8,111	0/1:67,3:61:99:226,0,501	0/0:15,0:4:3.01:0,3,41	0/0:54,2:51:52.30:0,52,592	0/1:53,2:51:34.23:34,0,398	0/0:49,0:17:8.51:0,9,69	0/1:49,2:41:76.22:76,0,359	0/1:57,6:39:99:254,0,268	0/1:41,6:36:99:173,0,324	0/1:26,1:17:25.69:26,0,39
chr10	25134875	.	GTTC	G	2080.45	PASS	AB=0.930;AC=17;AF=0.340;AN=50;BaseQRankSum=-1.886;DP=1125;FS=59.488;HRun=0;HaplotypeScore=271.9015;InbreedingCoeff=-0.4402;MQ=23.40;MQ0=152;MQRankSum=-1.251;QD=2.82;ReadPosRankSum=-1.453;VQSLOD=0.3170;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:30:28.53:0,29,498	0/1:29,1:24:4.53:5,0,88	./.	./.	0/1:63,6:59:99:194,0,230	0/1:23,0:14:67.33:81,0,67	0/0:41,2:20:9.71:0,10,128	./.	0/0:63,1:36:5.98:0,6,202	0/1:56,9:52:99:479,0,360	0/1:31,4:32:99:132,0,145	0/1:36,3:22:47.12:47,0,229	0/1:36,2:27:24.96:126,0,25	0/1:40,1:26:42.06:42,0,206	0/1:30,1:20:26.82:134,0,27	1/1:19,4:16:6.02:68,6,0	0/0:63,0:32:17.69:0,18,264	0/0:42,0:20:12.13:0,12,205	0/0:17,0:7:2.98:0,3,45	0/1:65,8:64:99:284,0,438	0/0:17,0:5:3.01:0,3,60	0/1:51,7:52:52.62:53,0,323	0/1:51,5:52:54.44:54,0,342	0/0:50,0:17:4.19:0,4,73	0/1:44,3:39:99:156,0,174	0/1:56,6:38:99:188,0,182	0/1:43,5:37:99:183,0,313	0/0:26,0:16:0.53:0,1,29
chr10	25134887	.	CTTG	C	1161.40	PASS	AB=0.987;AC=21;AF=0.420;AN=50;BaseQRankSum=-0.007;DP=1150;FS=7.807;HRun=0;HaplotypeScore=244.7537;InbreedingCoeff=-0.7032;MQ=22.42;MQ0=203;MQRankSum=-0.957;QD=1.14;ReadPosRankSum=-5.826;VQSLOD=0.1834;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:30:15.87:0,16,558	0/0:25,0:18:14.33:0,14,218	./.	./.	0/1:69,0:56:99:128,0,121	0/1:25,0:15:35.15:35,0,87	0/1:43,0:19:16.38:16,0,137	./.	0/1:68,0:41:30.86:31,0,147	0/1:66,0:49:99:151,0,281	0/1:31,0:28:78.83:79,0,93	0/1:40,0:19:19.14:19,0,264	0/1:40,0:28:12.85:13,0,115	0/1:45,0:28:12.18:12,0,251	0/1:24,12:19:20.55:271,0,21	0/1:26,0:15:13.53:21,0,14	0/1:70,0:37:62.32:62,0,296	0/1:45,0:21:20.91:21,0,175	0/0:17,0:5:13.20:0,13,114	0/1:68,0:57:95.90:96,0,329	0/0:19,0:5:3.01:0,3,49	0/1:58,0:49:27.66:28,0,306	0/1:51,0:42:89.09:89,0,254	0/1:60,0:20:2.74:3,0,79	0/1:40,0:32:61.12:61,0,79	0/1:64,1:33:32.86:33,0,237	0/1:51,0:39:99:104,0,198	0/1:21,0:12:9.05:32,0,9
chr10	25135026	.	T	TTCCTTC	238.64	PASS	AB=1.000;AC=3;AF=0.056;AN=54;BaseQRankSum=0.524;DP=564;FS=0.000;HRun=0;HaplotypeScore=113.8822;InbreedingCoeff=0.5851;MQ=60.84;MQ0=0;MQRankSum=-1.243;QD=5.30;ReadPosRankSum=-2.088;VQSLOD=1.7797;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:5,10:17:12:317,12,0	0/0:6,0:6:15.02:0,15,226	0/0:28,0:19:27.10:0,27,498	0/1:28,0:19:19.59:20,0,367	0/0:22,0:21:42.13:0,42,843	0/0:13,0:13:33.11:0,33,680	0/0:25,0:24:57.14:0,57,1122	./.	0/0:25,0:24:63.22:0,63,1274	0/0:32,0:29:69.17:0,69,1335	0/0:15,0:12:24.08:0,24,508	0/0:21,0:18:39.13:0,39,824	0/0:29,0:28:60.09:0,60,1205	0/0:17,0:15:33.10:0,33,660	0/0:32,0:30:60.21:0,60,1258	0/0:19,0:19:33.11:0,33,676	0/0:17,0:16:42.07:0,42,782	0/0:16,0:16:31.92:0,32,637	0/0:16,0:16:27.08:0,27,531	0/0:23,0:23:42.14:0,42,848	0/0:20,0:20:51.16:0,51,992	0/0:17,0:16:21.05:0,21,364	0/0:28,0:24:45.11:0,45,908	0/0:16,0:16:42.14:0,42,873	0/0:23,0:23:39.13:0,39,777	0/0:28,0:26:63.22:0,63,1321	0/0:27,0:27:57.20:0,57,1203	0/0:4,0:4:9.03:0,9,191
chr10	25135742	.	AG	A	602.43	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.373;DP=681;FS=4.634;HRun=1;HaplotypeScore=68.4770;InbreedingCoeff=0.9840;MQ=68.96;MQ0=1;MQRankSum=-4.475;QD=26.19;ReadPosRankSum=-3.072;VQSLOD=2.6270;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,108,1646	0/0:10,0:10:30.10:0,30,475	0/0:19,0:18:49.17:0,49,676	0/0:22,0:22:63.07:0,63,852	0/0:28,0:28:84.23:0,84,1262	0/0:23,0:23:69.22:0,69,1078	0/0:23,0:23:69.21:0,69,1067	1/1:6,17:21:15.37:691,15,0	0/0:30,0:30:90.31:0,90,1434	0/0:32,0:32:96.26:0,96,1450	0/0:20,0:20:60.20:0,60,956	0/0:23,0:23:69.22:0,69,1077	0/0:39,0:39:99:0,117,1793	0/0:32,0:32:96.27:0,96,1458	0/0:26,0:26:72.21:0,72,1101	0/0:20,0:20:60.19:0,60,932	0/0:12,0:12:36.12:0,36,574	0/0:29,0:28:84.18:0,84,1254	0/0:16,0:16:48.14:0,48,717	0/0:29,0:29:84.24:0,84,1272	0/0:28,0:28:84.27:0,84,1314	0/0:22,0:22:66.20:0,66,1017	0/0:19,0:19:57.13:0,57,805	0/0:26,0:26:78.15:0,78,1166	0/0:33,0:33:99:0,99,1415	0/0:30,0:30:90.27:0,90,1347	0/0:21,0:21:63.20:0,63,981	0/0:10,0:10:30.06:0,30,429
chr10	25136026	.	C	CA	19986	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-8.969;DP=568;FS=1.367;HRun=3;HaplotypeScore=50.0172;InbreedingCoeff=0.9956;MQ=87.28;MQ0=0;MQRankSum=-10.142;QD=37.78;ReadPosRankSum=5.195;VQSLOD=4.7247;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,17:18:45.15:630,45,0	1/1:0,7:7:18.53:253,19,0	0/0:21,0:21:60.17:0,60,704	0/0:18,0:18:51.07:0,51,568	1/1:1,22:23:63.12:839,63,0	1/1:1,27:28:78.26:1092,78,0	1/1:0,14:14:42.14:588,42,0	1/1:4,31:35:90.29:1243,90,0	1/1:2,23:25:63.21:882,63,0	1/1:0,19:19:57.18:782,57,0	1/1:1,19:20:54.14:734,54,0	1/1:2,21:23:63.21:879,63,0	1/1:2,28:30:81.27:1135,81,0	1/1:0,25:25:72.24:1008,72,0	1/1:1,24:25:66.22:924,66,0	1/1:2,27:29:75.25:1051,75,0	1/1:0,14:14:42.14:588,42,0	1/1:1,14:15:45.14:614,45,0	1/1:3,19:22:60.19:816,60,0	1/1:0,19:19:57.19:798,57,0	1/1:1,10:11:30.10:420,30,0	1/1:0,15:15:42.14:588,42,0	1/1:0,18:18:52.42:717,52,0	1/1:1,14:15:39.13:546,39,0	1/1:0,16:16:42.14:588,42,0	1/1:0,22:22:66.22:925,66,0	1/1:1,28:29:66.22:924,66,0	1/1:0,12:12:30.10:420,30,0
chr10	25136903	.	CT	C	1070.57	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.593;DP=542;FS=3.487;HRun=1;HaplotypeScore=51.1389;InbreedingCoeff=0.9377;MQ=76.70;MQ0=0;MQRankSum=-2.549;QD=36.92;ReadPosRankSum=-3.994;VQSLOD=2.3235;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,126,1927	0/0:6,0:6:18.06:0,18,283	0/0:15,0:15:42.09:0,42,599	0/0:18,0:18:48.12:0,48,738	0/0:22,0:22:66.23:0,66,1054	0/0:31,0:31:90.31:0,90,1436	0/0:21,0:21:60.16:0,60,889	1/1:2,27:29:87.26:1165,87,0	0/0:13,0:13:39.13:0,39,623	0/0:17,0:17:51.17:0,51,797	0/0:15,0:15:39.12:0,39,600	0/0:17,0:17:51.15:0,51,751	0/0:11,0:11:33.10:0,33,502	0/0:22,0:22:66.18:0,66,981	0/0:20,0:20:60.19:0,60,936	0/0:22,0:21:66.21:0,66,1031	0/0:28,0:28:84.27:0,84,1311	0/0:17,0:17:51.17:0,51,807	0/0:14,0:14:42.14:0,42,661	0/0:16,0:16:48.16:0,48,761	0/0:23,0:23:66.20:0,66,1028	0/0:19,0:19:57.18:0,57,884	0/0:13,0:13:39.13:0,39,622	0/0:24,0:24:72.23:0,72,1127	0/0:26,0:26:78.23:0,78,1197	0/0:21,0:21:54.18:0,54,842	0/0:17,0:17:51.17:0,51,815	0/0:3,0:3:9.03:0,9,144
chr10	25136939	.	TA	T	887.31	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.456;DP=552;FS=2.574;HRun=1;HaplotypeScore=57.2401;InbreedingCoeff=0.8908;MQ=67.58;MQ0=0;MQRankSum=-0.702;QD=32.86;ReadPosRankSum=-3.247;VQSLOD=2.4950;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:63.20:0,63,979	0/0:10,0:10:30.05:0,30,428	0/0:5,1:6:9.46:0,9,206	0/0:9,0:10:11.15:0,11,151	0/0:26,0:26:78.20:0,78,1167	0/0:24,0:24:69.04:0,69,1018	0/0:22,0:22:66.17:0,66,962	1/1:4,23:27:75.20:982,75,0	0/0:16,0:16:48.15:0,48,743	0/0:24,0:24:69.23:0,69,1075	0/0:20,0:20:57.19:0,57,910	0/0:24,0:24:72.22:0,72,1100	0/0:11,0:11:33.10:0,33,504	0/0:21,0:21:60.18:0,60,911	0/0:28,0:28:84.27:0,84,1313	0/0:18,0:17:54.18:0,54,862	0/0:27,0:27:78.19:0,78,1147	0/0:22,0:22:66.22:0,66,1034	0/0:10,0:10:30.10:0,30,476	0/0:17,0:17:48.16:0,48,751	0/0:20,0:20:60.18:0,60,932	0/0:13,0:13:39.12:0,39,596	0/0:21,0:21:60.17:0,60,901	0/0:29,0:29:87.26:0,87,1339	0/0:33,0:33:99:0,99,1579	0/0:22,0:22:66.20:0,66,992	0/0:24,0:24:72.17:0,72,1049	0/0:4,0:4:12.04:0,12,191
chr10	25136965	.	GAA	G	733.06	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.976;DP=576;FS=4.685;HRun=2;HaplotypeScore=74.1275;InbreedingCoeff=0.9441;MQ=78.82;MQ0=0;MQRankSum=-4.167;QD=38.58;ReadPosRankSum=-3.948;VQSLOD=2.6301;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:57.18:0,57,1122	0/0:9,0:9:27.09:0,27,548	0/0:24,0:24:72.23:0,72,1317	0/0:15,0:15:45.11:0,45,781	0/0:26,0:26:78.26:0,78,1546	0/0:20,0:20:60.17:0,60,1101	0/0:19,0:19:57.20:0,57,1137	1/1:4,15:19:54.17:828,54,0	0/0:17,0:17:51.14:0,51,961	0/0:29,0:29:87.30:0,87,1765	0/0:18,0:18:53.95:0,54,991	0/0:24,0:24:72.23:0,72,1392	0/0:13,0:13:36.11:0,36,695	0/0:21,0:21:60.18:0,60,1145	0/0:28,0:28:84.29:0,84,1702	0/0:17,0:16:51.18:0,51,1031	0/0:29,0:29:84.24:0,84,1557	0/0:21,0:21:63.16:0,63,1187	0/0:12,0:12:36.10:0,36,648	0/0:27,0:27:75.20:0,75,1442	0/0:19,0:18:51.15:0,51,987	0/0:17,0:17:51.16:0,51,1000	0/0:23,0:23:66.19:0,66,1200	0/0:32,0:32:90.29:0,90,1786	0/0:31,0:31:90.31:0,90,1814	0/0:25,0:25:75.25:0,75,1490	0/0:19,0:19:57.18:0,57,1114	0/0:3,0:3:9.03:0,9,183
chr10	25137458	.	A	AACACACACACACAC	17813.90	PASS	AB=1.000;AC=51;AF=0.944;AN=54;BaseQRankSum=0.272;DP=580;FS=0.000;HRun=0;HaplotypeScore=243.2739;InbreedingCoeff=0.3744;MQ=56.04;MQ0=9;MQRankSum=-1.247;QD=33.93;ReadPosRankSum=2.858;VQSLOD=3.8112;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:32,0:38:3.03:146,3,0	1/1:6,0:6:12.02:356,12,0	0/0:31,0:20:5.95:0,6,58	./.	1/1:27,6:34:11.04:736,11,0	1/1:25,0:24:21.19:783,21,0	0/1:20,0:20:24.83:701,0,25	1/1:22,0:21:20.99:416,21,0	1/1:16,0:17:12.04:525,12,0	1/1:10,2:12:21.06:749,21,0	1/1:21,1:23:14.83:850,15,0	1/1:17,4:21:23.77:1413,24,0	1/1:19,1:20:15.05:703,15,0	1/1:17,0:17:15.05:727,15,0	1/1:10,0:17:17.84:416,18,0	1/1:20,4:22:17.88:994,18,0	1/1:15,0:19:21.03:444,21,0	1/1:15,0:20:4.11:484,4,0	1/1:9,0:8:9.03:383,9,0	1/1:17,2:21:12.04:699,12,0	1/1:19,0:18:0.14:0,0,0	1/1:13,2:15:12.04:699,12,0	1/1:14,0:14:17.82:748,18,0	1/1:20,0:20:12.04:566,12,0	1/1:21,2:23:14.83:874,15,0	1/1:31,0:31:45.14:1520,45,0	1/1:20,2:25:32.23:1687,32,0	1/1:5,0:5:8.99:193,9,0
chr10	25137508	.	G	GA	208.51	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.263;DP=496;FS=4.802;HRun=6;HaplotypeScore=104.5482;InbreedingCoeff=0.9667;MQ=62.27;MQ0=2;MQRankSum=-4.553;QD=23.17;ReadPosRankSum=-2.545;VQSLOD=1.7599;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:26:51.06:0,51,502	0/0:10,0:10:30.05:0,30,296	0/0:26,0:23:39.96:0,40,496	0/0:12,0:11:26.98:0,27,249	0/0:28,0:28:57.40:0,57,597	0/0:19,0:19:54.07:0,54,532	0/0:18,0:18:42.07:0,42,426	1/1:1,8:9:24.08:302,24,0	0/0:14,0:14:39.08:0,39,391	0/0:24,0:24:66.15:0,66,673	0/0:20,0:20:41.27:0,41,425	0/0:22,0:22:57.13:0,57,581	0/0:14,0:14:36.08:0,36,367	0/0:15,0:15:32.92:0,33,313	0/0:19,0:19:48.06:0,48,476	0/0:16,0:15:36.08:0,36,366	0/0:18,0:19:47.14:0,47,464	0/0:20,0:20:16.32:0,16,332	0/0:8,0:8:24.04:0,24,239	0/0:22,0:22:60.13:0,60,611	0/0:17,0:17:42.09:0,42,427	0/0:15,0:15:39.06:0,39,386	0/0:21,0:21:50.96:0,51,492	0/0:13,0:13:34.63:0,35,335	0/0:20,0:19:48.11:0,48,489	0/0:18,0:18:54.06:0,54,528	0/0:26,0:26:66.13:0,66,661	0/0:5,0:5:15.03:0,15,153
chr10	25138134	.	AT	A	582.98	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.868;DP=430;FS=19.287;HRun=5;HaplotypeScore=77.3744;InbreedingCoeff=0.9485;MQ=73.44;MQ0=0;MQRankSum=-1.276;QD=21.59;ReadPosRankSum=-3.885;VQSLOD=1.3740;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:36.12:0,36,489	0/0:11,0:11:30.09:0,30,390	0/0:10,0:9:12.48:0,12,290	0/0:13,0:13:20.25:0,20,195	0/0:26,0:26:72.16:0,72,912	0/0:17,0:17:48.13:0,48,618	0/0:6,0:6:18.06:0,18,244	1/1:5,22:26:60.17:678,60,0	0/0:15,0:15:36.10:0,36,475	0/0:16,0:16:39.12:0,39,508	0/0:21,0:21:57.19:0,57,769	0/0:11,0:11:30.06:0,30,362	0/0:16,0:16:48.12:0,48,596	0/0:17,0:17:48.10:0,48,576	0/0:10,0:10:24.08:0,24,328	0/0:10,0:10:30.10:0,30,409	0/0:7,0:7:21.07:0,21,287	0/0:12,0:12:36.10:0,36,472	0/0:9,0:9:20.95:0,21,243	0/0:17,0:17:48.15:0,48,636	0/0:17,0:17:48.14:0,48,637	0/0:15,0:15:36.12:0,36,487	0/0:18,0:18:39.09:0,39,482	0/0:14,0:14:36.11:0,36,477	0/0:23,0:23:60.18:0,60,801	0/0:21,0:21:54.16:0,54,697	0/0:19,0:19:57.16:0,57,745	0/0:15,0:15:27.04:0,27,347
chr10	25138205	.	G	GC	156.44	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.485;DP=407;FS=38.629;HRun=6;HaplotypeScore=52.5779;InbreedingCoeff=0.9274;MQ=62.38;MQ0=2;MQRankSum=-3.581;QD=11.17;ReadPosRankSum=-1.767;VQSLOD=-0.3516;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:21:54.12:0,54,550	0/0:6,0:6:12.02:0,12,122	0/0:14,0:11:23.52:0,24,237	0/0:15,0:10:14.25:0,14,127	0/0:22,0:22:56.99:0,57,566	0/0:11,0:11:30.05:0,30,298	0/0:14,0:13:33.07:0,33,336	1/1:4,10:13:21.05:249,21,0	0/0:15,0:15:42.09:0,42,428	0/0:8,0:8:24.04:0,24,236	0/0:14,0:14:36.08:0,36,367	0/0:9,0:9:24.04:0,24,238	0/0:10,0:10:27.06:0,27,275	0/0:18,0:18:48.11:0,48,489	0/0:9,0:9:21.04:0,21,214	0/0:14,0:14:42.08:0,42,422	0/0:23,0:23:69.14:0,69,695	0/0:17,0:17:48.11:0,48,487	0/0:11,0:11:30.07:0,30,305	0/0:15,0:15:45.07:0,45,444	0/0:36,0:36:99:0,99,992	0/0:7,0:7:18.03:0,18,178	0/0:12,0:12:30.05:0,30,299	0/0:14,0:13:39.09:0,39,397	0/0:14,0:14:36.08:0,36,367	0/0:20,0:20:51.11:0,51,520	0/0:14,0:14:39.07:0,39,390	0/0:9,0:8:24.05:0,24,245
chr10	25138805	.	CT	C	8290.17	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=7.288;DP=472;FS=2.253;HRun=9;HaplotypeScore=82.8102;InbreedingCoeff=0.9088;MQ=65.83;MQ0=5;MQRankSum=2.667;QD=19.55;ReadPosRankSum=5.124;VQSLOD=5.1464;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,30:30:81.04:741,81,0	1/1:1,8:9:21.01:192,21,0	0/0:7,0:6:12.03:0,12,132	0/0:9,0:7:8.51:0,9,75	1/1:5,27:32:75.02:684,75,0	1/1:1,18:18:36.02:329,36,0	1/1:2,12:14:30:274,30,0	0/0:32,0:31:78.22:0,78,889	1/1:3,8:11:21.01:192,21,0	1/1:1,15:16:45.02:412,45,0	1/1:5,18:24:45.01:412,45,0	1/1:1,14:15:27.01:247,27,0	1/1:4,10:13:24.01:220,24,0	1/1:0,11:11:30.02:274,30,0	1/1:2,13:14:5.49:223,5,0	1/1:4,6:7:15.01:137,15,0	1/1:2,23:25:35.82:473,36,0	1/1:3,15:18:31.83:280,32,0	1/1:3,13:16:39:351,39,0	1/1:3,16:19:39.01:356,39,0	1/1:1,9:10:24.01:220,24,0	1/1:1,6:7:15.01:137,15,0	1/1:5,11:15:30.01:274,30,0	1/1:2,18:20:48.02:439,48,0	1/1:1,15:16:24.01:220,24,0	1/1:3,14:17:42:379,42,0	1/1:4,21:24:51.03:467,51,0	1/1:1,13:13:39.02:357,39,0
chr10	25139664	.	T	TGG	10188.19	PASS	AB=1.000;AC=36;AF=0.643;AN=56;BaseQRankSum=12.276;DP=682;FS=3.779;HRun=2;HaplotypeScore=163.6214;InbreedingCoeff=-0.2409;MQ=55.63;MQ0=1;MQRankSum=-1.718;QD=16.25;ReadPosRankSum=11.770;VQSLOD=0.7802;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:45,0:45:51.61:678,0,52	0/1:8,0:8:3.99:131,0,4	0/0:28,0:23:62.93:0,63,851	0/0:26,0:26:67.22:0,67,842	0/1:25,0:25:17.76:378,0,18	0/1:24,0:24:32.73:410,0,33	0/1:19,0:19:26.91:279,0,27	0/1:29,0:20:99:161,0,191	0/1:35,0:35:33.71:571,0,34	1/1:27,0:27:20.12:529,20,0	1/1:16,0:16:4.87:229,5,0	1/1:34,0:34:71.01:801,71,0	1/1:25,0:25:10.59:441,11,0	0/1:31,0:31:44.76:465,0,45	1/1:37,0:37:86.79:731,87,0	0/1:30,0:30:68.81:463,0,69	1/1:22,0:22:29.04:429,29,0	0/1:26,0:26:20.85:425,0,21	0/1:14,0:13:50.87:200,0,51	0/1:15,0:15:39.79:197,0,40	1/1:33,4:37:8.08:542,8,0	1/1:20,0:20:0.90:316,1,0	1/1:16,0:16:32.99:313,33,0	0/1:19,0:19:4.82:276,0,5	0/1:21,0:21:0.20:335,0,0	1/1:15,0:15:11.96:263,12,0	0/1:31,0:31:33.64:593,0,34	0/1:6,0:6:32.56:33,0,52
chr10	25139665	.	G	GGA	22437.67	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=2.837;DP=692;FS=10.572;HRun=0;HaplotypeScore=129.3829;InbreedingCoeff=0.9428;MQ=55.26;MQ0=1;MQRankSum=-5.578;QD=35.06;ReadPosRankSum=4.950;VQSLOD=6.7471;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:47,0:47:90.31:1493,90,0	1/1:8,0:8:18.06:289,18,0	0/0:26,0:23:50.27:0,50,670	0/0:26,0:25:57.85:0,58,694	1/1:23,3:26:48.16:811,48,0	1/1:24,0:24:54.17:877,54,0	1/1:19,0:19:39.13:648,39,0	1/1:29,0:20:25.02:404,25,0	1/1:31,4:35:75.26:1244,75,0	1/1:27,1:28:78.26:1294,78,0	1/1:16,0:16:28.94:478,29,0	1/1:33,0:33:93.32:1560,93,0	1/1:25,1:26:57.18:925,57,0	1/1:33,0:33:66.68:1069,67,0	1/1:36,0:36:96.25:1507,96,0	1/1:31,0:31:75.23:1158,75,0	1/1:22,0:22:51.17:850,51,0	1/1:27,0:27:57.19:950,57,0	1/1:15,0:14:31.05:502,31,0	1/1:15,0:15:27.09:453,27,0	1/1:37,0:37:78.22:1252,78,0	1/1:20,0:20:42.14:680,42,0	1/1:16,1:17:39.11:601,39,0	1/1:20,0:20:42.11:653,42,0	1/1:23,0:23:48.14:748,48,0	1/1:15,0:15:36.12:605,36,0	1/1:32,0:32:78.27:1289,78,0	1/1:6,0:6:6.02:97,6,0
chr10	25139672	.	G	GA	10113.03	PASS	AB=0.600;AC=46;AF=0.821;AN=56;BaseQRankSum=10.503;DP=630;FS=3.972;HRun=1;HaplotypeScore=145.0203;InbreedingCoeff=0.2612;MQ=55.12;MQ0=0;MQRankSum=-4.964;QD=17.17;ReadPosRankSum=10.686;VQSLOD=4.3532;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,34:41:86.75:720,87,0	0/1:1,7:8:4.52:113,0,5	0/0:21,0:20:53.28:0,53,714	0/0:20,0:20:58.02:0,58,737	1/1:7,17:24:47.26:367,47,0	1/1:2,19:21:51.31:421,51,0	0/1:3,13:16:0.71:292,0,1	0/1:7,11:13:21.95:163,0,22	0/1:10,25:35:25.93:530,0,26	1/1:5,23:28:28.52:588,29,0	1/1:3,11:14:29.46:234,29,0	1/1:3,30:33:52.20:745,52,0	1/1:9,16:25:16.29:394,16,0	1/1:7,21:29:12.47:441,12,0	1/1:6,31:38:50.90:687,51,0	1/1:7,21:28:31.61:506,32,0	1/1:6,16:22:29.79:399,30,0	1/1:7,19:26:10.89:426,11,0	0/1:10,7:16:78.85:178,0,79	1/1:1,10:11:26.98:236,27,0	1/1:9,26:35:50.87:595,51,0	1/1:2,17:19:39.97:295,40,0	1/1:5,12:17:38.67:290,39,0	0/1:6,12:18:26.86:265,0,27	1/1:8,13:21:46.36:364,46,0	1/1:2,12:14:0.37:278,0,0	1/1:7,22:29:16.31:536,16,0	1/1:0,2:2:5.99:50,6,0
chr10	25139673	.	G	GT	10157.62	PASS	AB=0.670;AC=50;AF=0.893;AN=56;BaseQRankSum=9.581;DP=626;FS=10.374;HRun=0;HaplotypeScore=145.1516;InbreedingCoeff=0.5417;MQ=55.05;MQ0=0;MQRankSum=-3.708;QD=17.30;ReadPosRankSum=10.313;VQSLOD=5.6077;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,34:41:66.93:697,67,0	1/1:1,7:8:4.74:118,5,0	0/0:20,0:19:57.15:0,57,703	0/0:19,0:19:47.73:0,48,688	1/1:7,17:24:23.73:332,24,0	1/1:2,19:21:31.51:398,32,0	1/1:4,13:17:28.93:324,29,0	0/1:7,11:13:61.35:157,0,61	1/1:10,25:35:33:567,33,0	1/1:5,23:28:21.90:571,22,0	1/1:2,11:13:26.33:207,26,0	1/1:3,30:33:70.63:763,71,0	1/1:8,15:24:28.83:372,29,0	1/1:8,21:29:21.13:444,21,0	1/1:7,31:38:67.36:686,67,0	1/1:7,21:28:55.47:555,55,0	1/1:6,16:22:50.84:423,51,0	1/1:7,19:26:5.75:414,6,0	0/1:11,7:16:57:200,0,57	1/1:1,10:11:26.98:236,27,0	1/1:7,26:33:40.23:560,40,0	1/1:2,17:19:43.02:319,43,0	1/1:3,12:15:24.09:212,24,0	1/1:7,12:19:21.26:313,21,0	1/1:8,13:21:46.35:362,46,0	1/1:2,12:14:28.27:333,28,0	1/1:8,22:30:24.85:544,25,0	1/1:0,2:2:5.99:50,6,0
chr10	25140146	.	G	GGAGTGGAT	2302.90	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-6.040;DP=579;FS=1.887;HRun=0;HaplotypeScore=143.6427;InbreedingCoeff=0.9904;MQ=71.04;MQ0=0;MQRankSum=-5.604;QD=95.95;ReadPosRankSum=-3.211;VQSLOD=3.7797;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,99,2727	0/0:6,0:6:18.04:0,18,404	0/0:24,0:24:68.59:0,69,1643	0/0:33,0:33:93.21:0,93,2064	0/0:21,0:21:63.22:0,63,1768	0/0:26,0:26:69.18:0,69,1826	0/0:22,0:22:63.17:0,63,1568	1/1:5,17:23:69.22:2398,69,0	0/0:12,0:12:36.12:0,36,1054	0/0:12,0:12:33.11:0,33,945	0/0:13,0:13:33.07:0,33,862	0/0:30,0:30:84.28:0,84,2205	0/0:17,0:17:51.16:0,51,1345	0/0:25,0:25:72.22:0,72,1976	0/0:21,0:21:63.22:0,63,1845	0/0:25,0:25:75.26:0,75,2121	0/0:24,0:24:66.19:0,66,1783	0/0:23,0:23:66.13:0,66,1607	0/0:18,0:18:54.18:0,54,1447	0/0:21,0:21:60.20:0,60,1611	0/0:24,0:24:72.22:0,72,1944	0/0:15,0:15:42.13:0,42,1032	0/0:18,0:18:54.18:0,54,1516	0/0:17,0:17:51.16:0,51,1388	0/0:18,0:18:48.15:0,48,1320	0/0:28,0:28:81.26:0,81,2282	0/0:18,0:18:54.14:0,54,1311	0/0:9,0:9:27.09:0,27,791
chr10	25140218	.	AAG	A	1310.63	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.413;DP=451;FS=45.550;HRun=0;HaplotypeScore=61.8299;InbreedingCoeff=0.9413;MQ=88.95;MQ0=0;MQRankSum=0.127;QD=37.45;ReadPosRankSum=-5.262;VQSLOD=0.6202;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:72.24:0,72,1251	0/0:4,0:4:12.04:0,12,220	0/0:21,0:21:60.17:0,60,1046	0/0:21,0:19:20.47:0,20,664	0/0:34,0:34:99:0,102,1825	0/0:16,0:16:48.14:0,48,847	0/0:12,0:12:27.09:0,27,490	1/1:1,34:35:99:1405,102,0	0/0:7,0:7:18.06:0,18,330	0/0:11,0:11:33.11:0,33,597	0/0:15,0:15:45.15:0,45,815	0/0:17,0:17:45.15:0,45,820	0/0:11,0:11:27.09:0,27,485	0/0:15,0:15:42.14:0,42,741	0/0:18,0:18:45.15:0,45,814	0/0:16,0:16:45.14:0,45,795	0/0:22,0:22:63.22:0,63,1144	0/0:15,0:15:42.14:0,42,749	0/0:14,0:14:36.12:0,36,659	0/0:20,0:20:60.19:0,60,1059	0/0:7,0:7:21.07:0,21,385	0/0:8,0:8:21.06:0,21,356	0/0:13,0:13:39.13:0,39,712	0/0:7,0:7:18.06:0,18,330	0/0:19,0:19:57.20:0,57,1043	0/0:20,0:20:60.21:0,60,1096	0/0:14,0:14:36.12:0,36,659	0/0:12,0:12:33.09:0,33,570
chr10	25140269	.	A	AAAATT	1103.37	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-4.750;DP=342;FS=57.254;HRun=0;HaplotypeScore=99.8680;InbreedingCoeff=0.7262;MQ=63.45;MQ0=0;MQRankSum=-5.651;QD=39.41;ReadPosRankSum=-4.259;VQSLOD=0.6010;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:69.71:0,70,1321	0/0:7,0:7:18.06:0,18,357	0/0:5,0:4:12.04:0,12,236	0/0:9,0:9:14.97:0,15,241	0/0:27,0:26:66.23:0,66,1276	0/0:18,0:18:54.19:0,54,1057	0/0:4,0:4:12.04:0,12,238	1/1:20,8:27:51.12:1198,51,0	0/0:4,0:4:12.04:0,12,238	0/0:10,0:10:27.09:0,27,536	0/0:9,0:9:24.08:0,24,476	0/0:10,0:10:30.09:0,30,560	0/0:8,0:8:21.07:0,21,405	0/0:9,0:9:27.09:0,27,521	0/0:12,0:12:30.09:0,30,529	0/0:11,0:11:33.11:0,33,654	0/0:20,0:20:54.18:0,54,1055	0/0:14,0:14:39.13:0,39,774	0/0:11,0:11:33.11:0,33,655	0/0:10,0:10:24.08:0,24,448	0/0:1,0:1:3.01:0,3,60	0/0:4,0:4:12.04:0,12,238	0/0:12,0:12:33.10:0,33,620	0/0:4,0:4:12.04:0,12,238	0/0:28,0:28:78.27:0,78,1516	0/0:19,0:19:51.17:0,51,966	0/0:13,0:13:36.12:0,36,700	0/0:8,0:8:21.07:0,21,417
chr10	25140422	.	A	ATT	7237.52	PASS	AB=1.000;AC=49;AF=0.942;AN=52;BaseQRankSum=0.280;DP=269;FS=9.119;HRun=3;HaplotypeScore=48.3571;InbreedingCoeff=0.4414;MQ=60.77;MQ0=0;MQRankSum=-1.459;QD=27.41;ReadPosRankSum=3.936;VQSLOD=2.9546;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,10:11:24.04:405,24,0	1/1:4,0:4:12.02:120,12,0	0/0:3,0:3:9.03:0,9,125	./.	1/1:19,0:19:48.03:472,48,0	1/1:15,0:15:12.15:306,12,0	1/1:6,0:6:18.04:180,18,0	1/1:40,0:40:72.09:976,72,0	1/1:6,0:6:15.03:151,15,0	1/1:9,0:9:24.02:218,24,0	1/1:6,0:6:15.03:150,15,0	1/1:10,0:10:24.05:239,24,0	1/1:8,0:8:24.05:240,24,0	1/1:7,0:7:18.04:180,18,0	1/1:5,0:5:12.03:127,12,0	1/1:6,0:6:15.03:149,15,0	1/1:0,16:16:39.13:715,39,0	1/1:1,9:10:21.07:384,21,0	0/1:8,0:8:8.92:134,0,9	1/1:11,0:11:33.07:343,33,0	1/1:2,0:2:6.01:60,6,0	./.	1/1:4,0:4:12.02:121,12,0	1/1:1,0:1:3.01:31,3,0	1/1:9,0:9:27.05:264,27,0	1/1:9,0:9:24.02:224,24,0	1/1:21,0:21:35.18:521,35,0	1/1:21,0:21:48.12:527,48,0
chr10	25140424	.	T	TTA	11562.58	PASS	AC=50;AF=0.962;AN=52;BaseQRankSum=-0.970;DP=285;FS=13.760;HRun=0;HaplotypeScore=36.8095;InbreedingCoeff=0.6253;MQ=62.56;MQ0=0;MQRankSum=-2.978;QD=41.29;ReadPosRankSum=1.813;VQSLOD=5.5964;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:9,0:9:21:197,21,0	1/1:0,4:4:12.04:220,12,0	0/0:4,0:4:9.01:0,9,109	./.	1/1:2,18:20:48.16:840,48,0	1/1:1,14:15:33.11:605,33,0	1/1:1,6:7:18.06:330,18,0	1/1:10,34:44:99:1881,108,0	1/1:1,5:6:15.05:275,15,0	1/1:1,9:10:27.07:463,27,0	1/1:1,6:8:15.05:275,15,0	1/1:0,10:10:24.08:440,24,0	1/1:0,8:8:24.08:440,24,0	1/1:0,7:7:18.06:330,18,0	1/1:0,5:5:12.04:220,12,0	1/1:1,5:7:15.05:275,15,0	1/1:17,0:17:39.05:365,39,0	1/1:11,0:11:21.04:214,21,0	1/1:2,7:9:24.05:378,24,0	1/1:0,11:12:33.11:601,33,0	1/1:0,2:2:6.02:110,6,0	./.	1/1:0,4:5:12.04:220,12,0	1/1:0,1:1:3.01:55,3,0	1/1:0,9:9:27.09:495,27,0	1/1:0,9:9:27.08:465,27,0	1/1:1,21:23:54.19:990,54,0	1/1:2,19:22:48.16:878,48,0
chr10	25143580	.	GT	G	14850.82	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-4.637;DP=704;FS=16.851;HRun=9;HaplotypeScore=118.3901;InbreedingCoeff=0.9995;MQ=79.02;MQ0=0;MQRankSum=-2.832;QD=23.46;ReadPosRankSum=2.499;VQSLOD=3.7225;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,23:25:66.03:604,66,0	1/1:1,15:16:42.01:384,42,0	0/0:20,0:20:30.07:0,30,333	0/0:16,0:16:33.09:0,33,381	1/1:0,25:25:66.03:604,66,0	1/1:0,25:25:72.04:659,72,0	1/1:2,20:22:57.03:522,57,0	1/1:5,38:44:99:1033,114,0	1/1:2,26:28:72.02:659,72,0	1/1:4,34:38:99:933,102,0	1/1:1,25:26:69.03:631,69,0	1/1:1,19:20:57.03:522,57,0	1/1:6,42:48:99:1106,107,0	1/1:2,24:26:69.03:632,69,0	1/1:7,30:37:81.02:741,81,0	1/1:4,22:26:66.03:604,66,0	0/0:1,0:22:56.82:0,57,289	0/0:1,0:13:31.39:0,31,166	1/1:1,10:11:30.02:274,30,0	1/1:3,24:27:69.03:632,69,0	1/1:0,23:23:63.03:577,63,0	1/1:1,16:17:42.02:384,42,0	1/1:4,18:22:54.02:494,54,0	1/1:3,22:25:66.03:604,66,0	1/1:3,23:26:69.03:632,69,0	1/1:5,19:24:54.01:494,54,0	1/1:4,29:33:78.04:714,78,0	1/1:4,15:19:45.02:412,45,0
chr10	25143746	.	CT	C	23630.88	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=4.120;DP=666;FS=0.000;HRun=1;HaplotypeScore=121.0004;InbreedingCoeff=0.9970;MQ=91.77;MQ0=0;MQRankSum=-11.880;QD=39.25;ReadPosRankSum=7.083;VQSLOD=3.8505;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,22:22:60.16:817,60,0	1/1:1,10:11:30.09:404,30,0	0/0:29,0:29:78.32:0,78,1207	0/0:35,0:35:46.47:0,46,1083	1/1:0,27:27:78.26:1086,78,0	1/1:0,25:25:69.23:965,69,0	1/1:0,20:20:54.18:755,54,0	1/1:0,38:38:99:1549,111,0	1/1:0,37:37:96.32:1343,96,0	1/1:1,31:32:96.31:1326,96,0	1/1:0,18:18:54.18:755,54,0	1/1:0,19:19:51.17:713,51,0	1/1:0,38:38:99:1552,111,0	1/1:0,24:24:66.22:923,66,0	1/1:0,34:34:90.30:1259,90,0	1/1:0,23:23:66.22:923,66,0	1/1:0,15:15:42.14:587,42,0	1/1:0,7:7:21.07:294,21,0	1/1:0,12:12:36.12:498,36,0	1/1:0,21:21:60.20:833,60,0	1/1:0,35:35:99:1385,99,0	1/1:0,18:18:45.15:629,45,0	1/1:0,22:22:63.21:881,63,0	1/1:0,20:20:57.19:797,57,0	1/1:0,25:25:72.24:1007,72,0	1/1:0,20:20:60.20:838,60,0	1/1:0,30:30:81.19:1133,81,0	1/1:0,9:9:27.09:378,27,0
chr10	25144428	.	G	GTA	2180.87	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=0.439;DP=606;FS=16.789;HRun=0;HaplotypeScore=113.0483;InbreedingCoeff=0.9798;MQ=86.76;MQ0=0;MQRankSum=-6.119;QD=47.41;ReadPosRankSum=-5.336;VQSLOD=1.6385;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:90.23:0,90,1241	0/0:7,0:7:21.07:0,21,309	0/0:22,0:22:36.42:0,36,610	0/0:21,0:21:47.29:0,47,711	0/0:29,0:29:84.26:0,84,1212	0/0:23,0:23:63.21:0,63,924	0/0:24,0:24:69.19:0,69,971	1/1:5,41:45:99:2276,128,0	0/0:20,0:20:57.15:0,57,814	0/0:13,0:13:36.12:0,36,514	0/0:16,0:16:42.14:0,42,617	0/0:25,0:25:72.24:0,72,1059	0/0:34,0:34:99:0,99,1434	0/0:19,0:19:54.16:0,54,770	0/0:23,0:23:69.19:0,69,957	0/0:19,0:19:57.19:0,57,839	0/0:19,0:19:57.14:0,57,795	0/0:17,0:17:51.08:0,51,684	0/0:21,0:21:63.20:0,63,888	0/0:25,0:25:66.17:0,66,909	0/0:25,0:25:72.19:0,72,997	0/0:13,0:13:39.13:0,39,570	0/0:10,0:10:30.09:0,30,422	0/0:16,0:16:48.13:0,48,666	0/0:25,0:25:75.21:0,75,1062	0/0:23,0:23:66.18:0,66,913	0/0:36,0:36:99:0,108,1541	0/0:5,0:5:15.05:0,15,221
chr10	25144638	.	TA	T	13494.47	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=3.848;DP=550;FS=3.056;HRun=2;HaplotypeScore=70.0757;InbreedingCoeff=0.9806;MQ=76.06;MQ0=0;MQRankSum=-2.286;QD=33.99;ReadPosRankSum=3.398;VQSLOD=5.1821;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:84.27:0,84,1238	1/1:0,11:11:33.11:428,33,0	0/0:14,0:13:6.71:0,7,390	0/0:13,0:13:33.05:0,33,385	1/1:0,35:35:99:1210,99,0	1/1:0,17:17:39.13:506,39,0	1/1:0,12:12:36.12:466,36,0	0/0:35,0:35:99:0,105,1539	1/1:2,9:11:21.07:273,21,0	1/1:2,18:20:54.17:699,54,0	1/1:1,20:21:57.14:719,57,0	1/1:2,26:28:66.21:857,66,0	1/1:0,22:22:60.19:778,60,0	1/1:1,15:16:45.15:584,45,0	0/0:23,0:23:69.22:0,69,1008	1/1:0,18:18:45.15:584,45,0	0/0:25,0:25:75.23:0,75,1083	0/0:15,0:15:45.15:0,45,674	1/1:1,21:22:63.19:802,63,0	1/1:1,21:22:57.19:740,57,0	1/1:0,12:12:33.11:428,33,0	1/1:1,14:15:35.99:426,36,0	1/1:1,25:26:69.10:895,69,0	1/1:0,11:11:30.10:389,30,0	1/1:1,20:21:57.19:740,57,0	1/1:0,19:19:54.17:688,54,0	1/1:1,31:32:81.26:1051,81,0	1/1:0,6:6:18.06:233,18,0
chr10	25145349	.	GTTC	G	1031.37	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.751;DP=591;FS=1.707;HRun=0;HaplotypeScore=81.2708;InbreedingCoeff=0.9640;MQ=88.41;MQ0=0;MQRankSum=-5.709;QD=38.20;ReadPosRankSum=-2.370;VQSLOD=3.4083;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:33:99:0,99,2107	0/0:13,0:13:39.13:0,39,871	0/0:30,0:30:84.26:0,84,1774	0/0:16,0:16:42.14:0,42,912	0/0:21,0:21:54.17:0,54,1147	0/0:19,0:19:54.17:0,54,1141	0/0:24,0:24:66.23:0,66,1458	1/1:3,24:27:72.22:1126,72,0	0/0:20,0:20:60.21:0,60,1340	0/0:22,0:22:63.22:0,63,1353	0/0:5,0:5:12.04:0,12,268	0/0:25,0:25:69.23:0,69,1500	0/0:21,0:21:63.22:0,63,1407	0/0:17,0:17:48.16:0,48,1072	0/0:27,0:27:81.28:0,81,1810	0/0:31,0:31:93.32:0,93,2044	0/0:30,0:30:87.27:0,87,1795	0/0:8,0:8:19.93:0,20,467	0/0:24,0:24:69.24:0,69,1512	0/0:21,0:21:57.20:0,57,1256	0/0:26,0:26:75.25:0,75,1634	0/0:11,0:11:33.11:0,33,737	0/0:15,0:15:45.09:0,45,938	0/0:29,0:28:84.29:0,84,1876	0/0:13,0:13:36.12:0,36,770	0/0:18,0:18:51.18:0,51,1128	0/0:35,0:33:99:0,102,2253	0/0:9,0:9:27.08:0,27,560
chr10	25145961	.	CT	C	8795.74	PASS	AB=0.833;AC=45;AF=0.804;AN=56;BaseQRankSum=8.450;DP=530;FS=43.361;HRun=10;HaplotypeScore=61.2157;InbreedingCoeff=0.8571;MQ=62.20;MQ0=2;MQRankSum=1.138;QD=20.41;ReadPosRankSum=1.519;VQSLOD=2.6750;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:40.30:0,40,597	1/1:0,9:9:26.99:234,27,0	0/0:9,0:7:15.47:0,15,150	0/1:4,1:5:20.21:20,0,27	1/1:2,26:28:43.37:594,43,0	1/1:2,19:21:53.98:469,54,0	1/1:3,8:11:17.99:156,18,0	1/1:12,20:31:29.75:488,30,0	1/1:2,17:19:47.98:417,48,0	1/1:3,25:28:41.79:592,42,0	1/1:0,17:17:41.99:365,42,0	1/1:1,15:16:41.99:364,42,0	1/1:2,14:16:41.97:364,42,0	1/1:0,16:16:47.99:417,48,0	0/0:27,0:27:75.20:0,75,830	1/1:4,17:21:47.98:417,48,0	0/0:20,0:20:47.82:0,48,507	0/0:19,0:18:48.11:0,48,521	1/1:8,13:20:5.77:279,6,0	1/1:4,22:26:62.98:547,63,0	1/1:1,8:8:20.99:182,21,0	1/1:3,23:26:65.98:573,66,0	1/1:1,18:19:50.99:443,51,0	1/1:3,7:12:15.98:182,16,0	1/1:2,23:25:65.98:573,66,0	1/1:4,18:22:53.98:469,54,0	1/1:5,20:25:53.97:469,54,0	1/1:0,7:7:21:182,21,0
chr10	25146532	.	CACACACACACACAA	C	4138.49	PASS	AB=1.000;AC=46;AF=0.821;AN=56;BaseQRankSum=-1.120;DP=506;FS=0.000;HRun=0;HaplotypeScore=152.0658;InbreedingCoeff=-0.0324;MQ=58.43;MQ0=19;MQRankSum=0.597;QD=8.46;ReadPosRankSum=0.691;VQSLOD=2.4751;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:20:54.41:92,0,54	1/1:6,0:6:11.97:96,12,0	0/1:21,0:12:11.10:28,0,11	0/1:26,0:15:11.78:12,0,23	0/1:20,0:20:8.94:267,0,9	1/1:22,1:23:12.04:280,12,0	1/1:20,0:20:3.01:45,3,0	0/1:15,0:14:41.30:64,0,41	1/1:16,1:15:12.51:314,13,0	1/1:16,0:16:27:198,27,0	1/1:14,0:14:2.42:11,2,0	1/1:16,0:16:6.02:127,6,0	1/1:13,1:14:22.30:261,22,0	1/1:10,1:9:22.95:168,23,0	0/0:17,0:17:3.01:0,3,41	1/1:27,0:27:20.94:431,21,0	0/1:23,0:22:35.90:36,0,589	0/1:23,0:22:45.28:45,0,1003	1/1:12,0:9:23.76:174,24,0	1/1:13,1:13:27.44:255,27,0	1/1:17,0:15:16.37:242,16,0	1/1:25,0:25:8.86:85,9,0	1/1:20,0:20:2.90:38,3,0	0/1:21,0:21:0:0,0,0	1/1:3,11:13:3.01:121,3,0	1/1:23,0:22:46.30:427,46,0	1/1:23,1:24:11.35:260,11,0	1/1:5,0:5:3.01:63,3,0
chr10	25146534	.	CACACACACACAA	C	5930.90	PASS	AB=0.923;AC=48;AF=0.857;AN=56;BaseQRankSum=-3.736;DP=505;FS=0.000;HRun=0;HaplotypeScore=130.9840;InbreedingCoeff=0.0413;MQ=55.91;MQ0=21;MQRankSum=0.746;QD=12.15;ReadPosRankSum=-0.002;VQSLOD=3.5942;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:20:14.71:291,0,15	1/1:6,0:6:11.97:96,12,0	0/1:20,0:10:11.10:28,0,11	0/1:27,0:13:11.78:12,0,23	1/1:18,3:21:41.93:516,42,0	1/1:3,20:23:12.04:380,12,0	1/1:5,15:20:3.01:89,3,0	1/1:15,0:14:12.76:103,13,0	1/1:7,10:15:14.99:356,15,0	1/1:14,0:14:29.79:303,30,0	1/1:2,11:13:2.68:55,3,0	1/1:0,16:16:6.02:215,6,0	1/1:14,0:14:26.51:282,27,0	1/1:11,0:9:26.92:236,27,0	0/0:17,0:17:2.84:0,3,14	1/1:2,24:26:20.94:741,21,0	0/1:23,0:22:73.62:74,0,396	0/1:23,0:22:68.43:68,0,763	1/1:12,0:9:23.89:218,24,0	1/1:15,0:14:32.57:361,33,0	1/1:19,0:17:22.37:229,22,0	1/1:7,18:25:8.99:153,9,0	1/1:2,18:20:2.56:75,3,0	0/1:3,17:20:0:0,0,0	1/1:15,0:13:3.01:89,3,0	1/1:4,19:22:47.77:538,48,0	1/1:4,19:23:11.56:316,12,0	1/1:0,5:5:3.01:108,3,0
chr10	25146538	.	CACACACAA	C	4606.84	PASS	AB=0.994;AC=51;AF=0.911;AN=56;BaseQRankSum=-2.195;DP=498;FS=0.000;HRun=0;HaplotypeScore=110.8954;InbreedingCoeff=-0.0305;MQ=54.98;MQ0=21;MQRankSum=1.675;QD=9.25;ReadPosRankSum=-0.149;VQSLOD=3.3107;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:21:32.47:255,32,0	1/1:6,0:6:11.97:96,12,0	0/1:17,0:6:24.97:25,0,33	0/1:30,0:13:10.89:11,0,24	1/1:21,0:21:47.80:413,48,0	1/1:23,0:23:12.04:217,12,0	1/1:19,0:19:3.01:43,3,0	1/1:14,0:13:26.01:168,26,0	1/1:16,0:14:14.98:228,15,0	1/1:16,0:16:35.76:269,36,0	1/1:13,0:13:2.49:18,2,0	1/1:16,0:16:6.02:123,6,0	1/1:13,0:13:29.50:255,29,0	1/1:12,0:10:29.90:235,30,0	1/1:2,15:17:2.88:55,3,0	1/1:25,0:25:20.94:418,21,0	0/1:22,0:21:99:132,0,135	0/1:23,0:22:86.98:87,0,336	1/1:12,0:9:26.89:214,27,0	1/1:15,0:14:32.83:263,33,0	1/1:20,0:18:25.37:218,25,0	1/1:23,0:23:8.90:69,9,0	1/1:19,0:19:2.69:29,3,0	0/1:19,0:19:0:0,0,0	1/1:14,0:12:3.01:61,3,0	1/1:23,0:22:47.80:447,48,0	1/1:21,0:21:11.49:196,11,0	1/1:5,0:5:3.01:62,3,0
chr10	25146544	.	CAA	C	4401.92	PASS	AB=1.000;AC=52;AF=0.929;AN=56;BaseQRankSum=-1.429;DP=490;FS=0.000;HRun=3;HaplotypeScore=79.6017;InbreedingCoeff=0.0682;MQ=53.11;MQ0=22;MQRankSum=1.901;QD=9.31;ReadPosRankSum=1.901;VQSLOD=1.5959;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:22:41.50:326,42,0	1/1:5,0:5:11.97:96,12,0	0/1:14,0:5:24.97:25,0,33	0/1:33,0:8:11.52:12,0,23	1/1:20,0:20:47.65:357,48,0	1/1:24,0:23:11.84:77,12,0	1/1:17,0:17:2.94:18,3,0	1/1:17,0:16:40.88:292,41,0	1/1:16,0:14:14.84:102,15,0	1/1:5,9:14:38.75:292,39,0	1/1:11,0:11:2.94:18,3,0	1/1:16,0:16:5.93:39,6,0	1/1:17,0:17:41.38:307,41,0	1/1:14,0:12:32.89:259,33,0	1/1:17,0:16:2.79:17,3,0	1/1:24,0:24:20.64:136,21,0	1/1:21,2:22:41.79:380,42,0	1/1:22,2:23:39.62:426,40,0	1/1:7,5:9:26.84:203,27,0	1/1:15,0:14:32.87:261,33,0	1/1:19,0:17:25.40:211,25,0	1/1:21,0:21:8.84:58,9,0	1/1:18,0:18:2.69:16,3,0	0/0:17,0:17:0:0,0,0	1/1:13,0:11:2.96:19,3,0	1/1:20,0:19:47.76:364,48,0	1/1:20,0:20:11.56:71,12,0	1/1:5,0:5:2.97:20,3,0
chr10	25147168	.	AGCTC	A	848.32	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.471;DP=485;FS=7.126;HRun=0;HaplotypeScore=75.9653;InbreedingCoeff=0.9786;MQ=80.28;MQ0=0;MQRankSum=-6.527;QD=56.55;ReadPosRankSum=-2.160;VQSLOD=4.1664;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:48.16:0,48,1391	0/0:11,0:11:33.11:0,33,956	0/0:15,0:16:42.10:0,42,1198	0/0:11,0:11:33.03:0,33,837	0/0:31,0:31:93.31:0,93,2556	0/0:23,0:23:69.24:0,69,2000	0/0:7,0:7:21.07:0,21,609	1/1:0,15:15:45.15:943,45,0	0/0:12,0:12:36.12:0,36,1043	0/0:26,0:26:75.26:0,75,2125	0/0:30,0:30:90.31:0,90,2607	0/0:12,0:12:36.12:0,36,1042	0/0:20,0:20:60.21:0,60,1722	0/0:15,0:15:45.15:0,45,1304	0/0:18,0:18:54.19:0,54,1542	0/0:18,0:18:54.19:0,54,1556	0/0:15,0:15:45.15:0,45,1302	0/0:13,0:13:39.13:0,39,1124	0/0:22,0:22:66.23:0,66,1842	0/0:37,0:37:99:0,111,3187	0/0:12,0:12:36.12:0,36,1022	0/0:9,0:9:27.09:0,27,763	0/0:17,0:17:51.18:0,51,1478	0/0:5,0:5:15.05:0,15,435	0/0:18,0:18:54.19:0,54,1565	0/0:20,0:20:60.21:0,60,1724	0/0:23,0:23:69.24:0,69,1981	0/0:13,0:13:39.13:0,39,1130
chr10	25147335	.	GT	G	20365.75	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=5.784;DP=642;FS=6.695;HRun=2;HaplotypeScore=68.1235;InbreedingCoeff=0.8537;MQ=70.16;MQ0=0;MQRankSum=-5.532;QD=35.30;ReadPosRankSum=3.849;VQSLOD=5.3681;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,32:32:81.26:1048,81,0	1/1:0,10:10:27.09:351,27,0	0/0:20,0:20:54.13:0,54,747	0/0:9,0:9:23.57:0,24,320	1/1:0,30:30:90.29:1168,90,0	1/1:1,26:27:69.22:896,69,0	1/1:0,11:11:30.10:389,30,0	1/1:1,34:35:99:1304,102,0	1/1:0,22:22:66.21:857,66,0	1/1:0,32:32:96.31:1243,96,0	1/1:1,27:28:81.26:1051,81,0	1/1:0,18:18:45.15:584,45,0	1/1:0,32:32:90.29:1168,90,0	1/1:0,39:39:99:1285,99,0	0/0:36,0:36:99:0,108,1611	1/1:0,26:26:69.22:896,69,0	1/1:0,22:22:63.20:818,63,0	1/1:1,7:8:2.13:250,2,0	1/1:1,23:24:69.20:865,69,0	1/1:0,20:20:57.14:719,57,0	1/1:0,23:23:60.20:779,60,0	1/1:0,11:11:30.10:385,30,0	1/1:0,13:13:33.11:429,33,0	1/1:0,12:12:33.11:428,33,0	1/1:1,29:29:87.28:1127,87,0	1/1:1,32:33:96.28:1218,96,0	1/1:0,27:27:69.22:896,69,0	1/1:1,11:12:0.11:213,0,0
chr10	25147556	.	GC	G	1058.47	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.247;DP=728;FS=0.000;HRun=2;HaplotypeScore=71.5907;InbreedingCoeff=0.9972;MQ=78.24;MQ0=0;MQRankSum=-2.035;QD=32.07;ReadPosRankSum=-2.755;VQSLOD=2.5148;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,114,1700	0/0:8,0:8:24.08:0,24,360	0/0:14,0:14:42.06:0,42,602	0/0:17,0:17:47.99:0,48,686	0/0:33,0:33:99:0,99,1423	0/0:32,0:32:96.26:0,96,1374	0/0:28,0:28:84.26:0,84,1236	1/1:3,30:33:90.28:1153,90,0	0/0:28,0:28:84.27:0,84,1221	0/0:27,0:27:75.25:0,75,1124	0/0:24,0:24:69.21:0,69,992	0/0:27,0:27:78.26:0,78,1168	0/0:38,0:38:99:0,114,1707	0/0:29,0:29:87.26:0,87,1261	0/0:34,0:34:99:0,99,1464	0/0:30,0:30:87.27:0,87,1280	0/0:27,0:27:81.27:0,81,1211	0/0:12,0:12:33.11:0,33,494	0/0:12,0:12:33.11:0,33,477	0/0:32,0:32:96.33:0,96,1439	0/0:26,0:26:75.25:0,75,1121	0/0:11,0:11:33.09:0,33,457	0/0:24,0:24:60.19:0,60,862	0/0:24,0:24:69.23:0,69,1033	0/0:29,0:29:84.21:0,84,1187	0/0:35,0:35:99:0,102,1507	0/0:41,0:41:99:0,123,1843	0/0:14,0:14:42.14:0,42,629
chr10	25148289	.	CT	C	909.41	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-4.138;DP=758;FS=2.526;HRun=3;HaplotypeScore=134.9832;InbreedingCoeff=0.9918;MQ=91.51;MQ0=0;MQRankSum=-3.214;QD=32.48;ReadPosRankSum=1.252;VQSLOD=2.8734;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,120,1725	0/0:11,0:11:33.11:0,33,457	0/0:32,0:32:90.28:0,90,1261	0/0:32,0:32:92.63:0,93,1267	0/0:32,0:32:96.31:0,96,1360	0/0:31,0:31:87.29:0,87,1253	0/0:32,0:32:93.31:0,93,1335	0/0:38,0:38:99:0,108,1541	0/0:20,0:20:60.19:0,60,845	0/0:35,0:35:99:0,105,1489	0/0:18,0:18:54.18:0,54,778	0/0:28,0:28:81.25:0,81,1132	0/0:36,0:36:99:0,102,1449	0/0:29,0:29:87.28:0,87,1236	1/1:0,28:28:81.25:1004,81,0	0/0:21,0:21:63.20:0,63,890	0/0:30,0:30:90.27:0,90,1266	0/0:13,0:13:39.13:0,39,561	0/0:22,0:22:60.20:0,60,860	0/0:27,0:27:81.27:0,81,1167	0/0:35,0:35:99:0,105,1506	0/0:28,0:28:81.27:0,81,1166	0/0:16,0:16:48.16:0,48,691	0/0:34,0:34:96.31:0,96,1356	0/0:20,0:20:60.20:0,60,864	0/0:35,0:35:99:0,99,1426	0/0:27,0:26:81.27:0,81,1166	0/0:8,0:8:18.06:0,18,259
chr10	25149688	.	A	AG	1452.01	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-8.296;DP=591;FS=0.613;HRun=2;HaplotypeScore=100.3577;InbreedingCoeff=0.9856;MQ=78.01;MQ0=0;MQRankSum=-1.583;QD=33.77;ReadPosRankSum=-4.112;VQSLOD=2.2454;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:39.06:0,39,429	0/0:7,0:7:21.01:0,21,225	0/0:22,0:22:56.49:0,56,630	0/0:13,0:13:26.14:0,26,235	0/0:32,0:32:96.28:0,96,1170	0/0:37,0:37:99:0,105,1228	0/0:7,0:7:21.05:0,21,247	1/1:4,39:43:99:1547,117,0	0/0:25,0:25:69.17:0,69,805	0/0:19,0:19:48.11:0,48,566	0/0:30,0:30:84.25:0,84,1027	0/0:22,0:22:63.17:0,63,754	0/0:30,0:30:86.93:0,87,979	0/0:20,0:20:57.15:0,57,670	0/0:19,0:19:54.12:0,54,621	0/0:21,0:21:63.15:0,63,732	0/0:23,0:23:69.17:0,69,806	0/0:14,0:14:38.95:0,39,402	0/0:21,0:21:57.09:0,57,645	0/0:30,0:30:90.25:0,90,1080	0/0:23,0:23:69.19:0,69,832	0/0:22,0:22:63.18:0,63,757	0/0:20,0:20:60.13:0,60,682	0/0:7,0:7:21.07:0,21,260	0/0:20,0:20:57.15:0,57,673	0/0:20,0:20:57.15:0,57,682	0/0:17,0:17:51.11:0,51,573	0/0:11,0:11:27.03:0,27,303
chr10	25149798	.	CT	C	10388.45	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=10.037;DP=555;FS=10.462;HRun=8;HaplotypeScore=142.9107;InbreedingCoeff=0.9894;MQ=75.82;MQ0=0;MQRankSum=2.359;QD=23.88;ReadPosRankSum=1.991;VQSLOD=3.4298;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:51.14:0,51,604	1/1:1,12:13:36.06:348,36,0	0/0:9,0:9:21.03:0,21,221	0/0:13,0:13:16.29:0,16,171	1/1:3,32:35:96.15:927,96,0	1/1:3,28:31:75.12:724,75,0	1/1:2,12:14:24.04:232,24,0	1/1:9,23:32:67.04:639,67,0	1/1:1,15:16:45.07:435,45,0	1/1:2,19:21:54.08:522,54,0	1/1:4,20:24:54.07:521,54,0	1/1:1,20:21:54.09:521,54,0	1/1:1,14:15:39.06:377,39,0	1/1:1,12:13:33.05:319,33,0	0/0:25,0:25:69.20:0,69,823	1/1:3,16:19:45.07:435,45,0	0/0:22,0:22:66.19:0,66,785	0/0:29,0:29:75.19:0,75,883	1/1:3,19:22:57.03:536,57,0	1/1:1,29:30:81.13:782,81,0	1/1:2,9:11:27.04:261,27,0	1/1:2,10:12:30.05:290,30,0	1/1:1,17:18:42.06:405,42,0	1/1:4,9:13:27.04:261,27,0	1/1:1,18:19:51.08:493,51,0	1/1:1,21:22:63.10:608,63,0	1/1:4,24:28:66.10:637,66,0	1/1:1,5:6:12.02:116,12,0
chr10	25150368	.	TTCTC	T	1882.16	PASS	AB=0.938;AC=37;AF=0.740;AN=50;BaseQRankSum=-0.050;DP=576;FS=21.727;HRun=0;HaplotypeScore=101.1018;InbreedingCoeff=0.4206;MQ=67.05;MQ0=13;MQRankSum=0.212;QD=4.46;ReadPosRankSum=0.292;VQSLOD=0.6208;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:29:2.29:30,2,0	1/1:10,0:10:3:25,3,0	./.	./.	1/1:14,4:18:9.03:139,9,0	1/1:20,1:21:9.01:100,9,0	1/1:15,5:19:6.01:76,6,0	0/1:47,0:45:0.03:0,0,0	1/1:12,2:14:3.01:46,3,0	0/0:16,0:16:2.74:0,3,12	1/1:20,0:20:5.69:54,6,0	0/1:28,2:30:99:115,0,218	1/1:15,6:21:14:325,14,0	0/1:12,0:13:33.60:34,0,74	1/1:10,5:16:13.30:191,13,0	0/0:21,0:22:11.78:0,12,223	0/0:17,0:17:6.91:0,7,123	0/0:13,0:17:15.05:0,15,247	1/1:22,0:21:3:39,3,0	0/0:16,0:19:5.65:0,6,29	1/1:14,0:14:5.38:47,5,0	1/1:14,2:16:6.02:92,6,0	1/1:16,3:18:6.02:92,6,0	1/1:10,6:17:17.41:201,17,0	1/1:14,0:13:8.37:74,8,0	1/1:25,2:28:11.39:128,11,0	1/1:20,7:29:17.54:224,18,0	./.
chr10	25150883	.	TA	T	516.74	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.288;DP=549;FS=0.926;HRun=2;HaplotypeScore=117.4952;InbreedingCoeff=0.9361;MQ=78.70;MQ0=0;MQRankSum=-6.902;QD=20.67;ReadPosRankSum=-2.488;VQSLOD=2.9663;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:72.22:0,72,1056	0/0:7,0:7:21.07:0,21,315	0/0:21,0:21:63.17:0,63,869	0/0:10,0:10:27.09:0,27,380	0/0:28,0:28:81.27:0,81,1209	0/0:25,0:25:75.25:0,75,1121	0/0:10,0:10:30.10:0,30,446	1/1:10,15:25:47.20:612,47,0	0/0:13,0:13:39.13:0,39,583	0/0:23,0:23:69.23:0,69,1022	0/0:29,0:29:87.27:0,87,1263	0/0:10,0:10:30.10:0,30,447	0/0:19,0:19:57.19:0,57,851	0/0:17,0:17:51.17:0,51,761	0/0:33,0:33:96.33:0,96,1439	0/0:23,0:23:69.23:0,69,1032	0/0:23,0:23:66.16:0,66,989	0/0:17,0:17:48.16:0,48,719	0/0:21,0:21:60.18:0,60,875	0/0:29,0:29:87.29:0,87,1301	0/0:12,0:12:36.12:0,36,539	0/0:17,0:17:51.17:0,51,764	0/0:21,0:21:63.21:0,63,944	0/0:7,0:7:21.07:0,21,315	0/0:22,0:22:63.21:0,63,944	0/0:27,0:27:72.23:0,72,1058	0/0:30,0:30:90.28:0,90,1319	0/0:5,0:5:9.03:0,9,121
chr10	25150884	.	A	ATAACGAATAT	2458.94	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-0.634;DP=551;FS=1.685;HRun=0;HaplotypeScore=221.8260;InbreedingCoeff=0.9355;MQ=78.74;MQ0=0;MQRankSum=-7.545;QD=106.91;ReadPosRankSum=-2.608;VQSLOD=3.4435;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:72.22:0,72,2059	0/0:7,0:7:21.07:0,21,654	0/0:21,0:21:63.18:0,63,1482	0/0:10,0:10:24.89:0,25,708	0/0:29,0:29:81.28:0,81,2505	0/0:25,0:25:75.26:0,75,2322	0/0:11,0:11:30.10:0,30,752	1/1:17,6:23:69.15:2554,69,0	0/0:13,0:13:39.13:0,39,1200	0/0:24,0:24:69.24:0,69,2240	0/0:29,0:29:87.28:0,87,2615	0/0:10,0:10:30.10:0,30,926	0/0:19,0:19:57.20:0,57,1796	0/0:18,0:18:51.17:0,51,1476	0/0:33,0:33:96.33:0,96,3038	0/0:23,0:23:69.24:0,69,2117	0/0:23,0:23:66.23:0,66,2109	0/0:16,0:16:48.16:0,48,1498	0/0:20,0:20:60.18:0,60,1657	0/0:29,0:29:87.30:0,87,2806	0/0:12,0:12:36.12:0,36,1256	0/0:18,0:18:51.18:0,51,1624	0/0:21,0:21:63.22:0,63,2025	0/0:7,0:7:21.07:0,21,674	0/0:21,0:21:63.22:0,63,1920	0/0:27,0:27:72.23:0,72,2232	0/0:32,0:32:90.29:0,90,2843	0/0:5,0:5:9.03:0,9,241
chr10	25150913	.	TA	T	690.81	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-3.210;DP=550;FS=0.818;HRun=2;HaplotypeScore=124.1456;InbreedingCoeff=0.9407;MQ=76.16;MQ0=0;MQRankSum=-2.975;QD=24.67;ReadPosRankSum=-3.292;VQSLOD=2.5437;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:72.21:0,72,1024	0/0:11,0:11:33.09:0,33,451	0/0:16,0:16:39.11:0,39,553	0/0:10,0:10:29.65:0,30,382	0/0:27,0:27:81.27:0,81,1196	0/0:30,0:30:90.26:0,90,1271	0/0:12,0:12:36.12:0,36,533	1/1:4,24:28:66.10:786,66,0	0/0:16,0:16:46.04:0,46,668	0/0:27,0:27:81.27:0,81,1182	0/0:27,0:27:81.16:0,81,1097	0/0:14,0:14:42.12:0,42,583	0/0:17,0:17:51.16:0,51,734	0/0:22,0:22:66.22:0,66,977	0/0:41,0:41:99:0,123,1800	0/0:21,0:21:60.16:0,60,831	0/0:23,0:23:63.19:0,63,909	0/0:18,0:18:54.12:0,54,754	0/0:17,0:17:51.11:0,51,693	0/0:26,0:26:78.25:0,78,1134	0/0:8,0:8:24.08:0,24,355	0/0:16,0:16:48.09:0,48,684	0/0:17,0:17:51.07:0,51,706	0/0:8,0:8:24.08:0,24,354	0/0:19,0:19:57.16:0,57,804	0/0:23,0:23:66.21:0,66,943	0/0:29,0:28:84.25:0,84,1202	0/0:3,0:3:9.03:0,9,133
chr10	25151002	.	G	GA	504.48	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.262;DP=551;FS=9.461;HRun=0;HaplotypeScore=64.6516;InbreedingCoeff=0.9947;MQ=92.65;MQ0=0;MQRankSum=-6.730;QD=25.22;ReadPosRankSum=-2.710;VQSLOD=3.2252;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:96.29:0,96,1304	0/0:13,0:13:39.11:0,39,525	0/0:25,0:26:74.42:0,74,979	0/0:21,0:21:50.30:0,50,699	0/0:23,0:23:60.17:0,60,802	0/0:33,0:33:96.31:0,96,1326	0/0:21,0:21:63.21:0,63,881	1/1:0,20:20:57.06:599,57,0	0/0:10,0:10:30.07:0,30,384	0/0:26,0:26:78.24:0,78,1054	0/0:26,0:26:72.24:0,72,1005	0/0:17,0:17:51.17:0,51,712	0/0:18,0:18:54.15:0,54,720	0/0:11,0:11:30.08:0,30,400	0/0:23,0:23:69.23:0,69,964	0/0:19,0:19:57.19:0,57,795	0/0:26,0:26:78.21:0,78,1036	0/0:17,0:17:48.16:0,48,669	0/0:14,0:14:39.13:0,39,545	0/0:16,0:16:48.16:0,48,669	0/0:15,0:15:42.14:0,42,584	0/0:19,0:19:54.17:0,54,739	0/0:19,0:19:51.17:0,51,710	0/0:14,0:14:39.11:0,39,527	0/0:19,0:19:57.18:0,57,779	0/0:26,0:26:72.24:0,72,1005	0/0:19,0:19:57.19:0,57,796	0/0:8,0:8:21.07:0,21,294
chr10	25151003	.	C	CATGG	1163.37	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.422;DP=566;FS=8.816;HRun=0;HaplotypeScore=101.5673;InbreedingCoeff=0.9935;MQ=92.41;MQ0=0;MQRankSum=-7.984;QD=48.47;ReadPosRankSum=-3.153;VQSLOD=3.4828;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:95.85:0,96,1803	0/0:13,0:13:39.13:0,39,768	0/0:27,0:27:78.18:0,78,1467	0/0:21,0:21:54.11:0,54,940	0/0:24,0:24:60.17:0,60,1146	0/0:33,0:33:99:0,99,1973	0/0:21,0:21:63.22:0,63,1306	1/1:9,15:24:68.79:1258,69,0	0/0:8,0:8:24:0,24,404	0/0:26,0:26:78.24:0,78,1482	0/0:26,0:26:72.25:0,72,1506	0/0:18,0:18:51.16:0,51,997	0/0:18,0:18:54.14:0,54,1053	0/0:14,0:14:33.09:0,33,617	0/0:25,0:25:69.21:0,69,1371	0/0:20,0:20:57.18:0,57,1105	0/0:24,0:24:72.21:0,72,1396	0/0:18,0:18:48.15:0,48,927	0/0:13,0:13:39.13:0,39,778	0/0:19,0:19:48.16:0,48,974	0/0:16,0:16:45.14:0,45,904	0/0:19,0:19:54.17:0,54,1094	0/0:20,0:20:54.14:0,54,1037	0/0:13,0:13:39.09:0,39,761	0/0:20,0:20:57.18:0,57,1141	0/0:25,0:25:75.25:0,75,1535	0/0:20,0:20:57.20:0,57,1194	0/0:8,0:8:21.07:0,21,440
chr10	25151649	.	TC	T	611.14	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.274;DP=641;FS=3.138;HRun=3;HaplotypeScore=62.6115;InbreedingCoeff=0.9994;MQ=90.49;MQ0=0;MQRankSum=-5.544;QD=26.57;ReadPosRankSum=-2.767;VQSLOD=2.2964;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:42.14:0,42,604	0/0:10,0:10:30.10:0,30,432	0/0:30,0:30:87.25:0,87,1177	0/0:20,0:20:54.12:0,54,700	0/0:27,0:27:81.24:0,81,1129	0/0:31,0:31:93.31:0,93,1337	0/0:19,0:19:57.19:0,57,820	1/1:3,20:23:57.18:706,57,0	0/0:23,0:23:69.23:0,69,993	0/0:31,0:31:93.31:0,93,1339	0/0:31,0:31:93.29:0,93,1301	0/0:20,0:20:57.16:0,57,783	0/0:15,0:15:42.14:0,42,604	0/0:22,0:22:63.20:0,63,888	0/0:28,0:27:81.26:0,81,1148	0/0:27,0:27:81.26:0,81,1148	0/0:22,0:21:66.15:0,66,874	0/0:24,0:24:66.22:0,66,950	0/0:14,0:14:42.14:0,42,603	0/0:25,0:25:72.24:0,72,1037	0/0:20,0:20:54.18:0,54,777	0/0:23,0:23:66.22:0,66,950	0/0:21,0:21:63.21:0,63,904	0/0:18,0:18:54.15:0,54,755	0/0:16,0:16:48.16:0,48,691	0/0:34,0:34:99:0,102,1452	0/0:36,0:36:99:0,108,1553	0/0:15,0:15:45.15:0,45,647
chr10	25151781	.	A	ATTC	1111.33	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-4.616;DP=652;FS=3.188;HRun=0;HaplotypeScore=92.6661;InbreedingCoeff=0.9050;MQ=86.07;MQ0=0;MQRankSum=-4.340;QD=52.92;ReadPosRankSum=-3.835;VQSLOD=4.4971;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:50.07:0,50,709	0/0:13,0:13:36.10:0,36,546	0/0:20,0:20:45.12:0,45,634	0/0:24,0:25:60.14:0,60,899	0/0:36,0:36:99:0,105,1642	0/0:24,0:24:69.22:0,69,1067	0/0:16,0:16:39.12:0,39,595	1/1:4,17:21:57.20:1206,57,0	0/0:18,0:18:51.17:0,51,809	0/0:49,0:49:99:0,141,2234	0/0:23,0:23:54.17:0,54,833	0/0:16,0:16:45.15:0,45,714	0/0:24,0:24:57.19:0,57,904	0/0:18,0:18:54.16:0,54,831	0/0:25,0:25:72.23:0,72,1106	0/0:13,0:13:39.12:0,39,596	0/0:22,0:22:66.18:0,66,997	0/0:20,0:20:54.16:0,54,830	0/0:19,0:19:54.18:0,54,834	0/0:35,0:35:99:0,105,1612	0/0:12,0:12:36.12:0,36,571	0/0:27,0:27:66.22:0,66,1044	0/0:32,0:32:90.26:0,90,1355	0/0:23,0:23:63.17:0,63,929	0/0:34,0:34:99:0,99,1547	0/0:30,0:30:81.26:0,81,1242	0/0:34,0:34:84.22:0,84,1238	0/0:3,0:3:6.02:0,6,95
chr10	25151901	.	A	AAG	19139.45	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=-5.124;DP=635;FS=17.079;HRun=0;HaplotypeScore=102.9964;InbreedingCoeff=0.9984;MQ=86.35;MQ0=1;MQRankSum=-3.039;QD=39.14;ReadPosRankSum=4.952;VQSLOD=5.7117;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:48.92:0,49,631	1/1:2,8:10:21.07:351,21,0	0/0:26,0:26:51.13:0,51,609	0/0:18,0:17:29.89:0,30,292	1/1:3,22:25:69.24:1152,69,0	1/1:1,31:32:84.28:1370,84,0	1/1:5,13:18:32.47:510,32,0	0/0:25,0:25:66.15:0,66,801	1/1:2,19:22:48.16:803,48,0	1/1:3,31:34:93.27:1471,93,0	1/1:6,24:30:72.16:1157,72,0	1/1:1,14:15:42.14:702,42,0	1/1:4,22:26:63.22:1053,63,0	1/1:3,22:26:66.23:1103,66,0	0/0:30,0:30:81.25:0,81,1019	1/1:3,18:21:51.17:853,51,0	0/0:14,0:14:39.08:0,39,455	0/0:11,0:11:30.10:0,30,382	1/1:3,12:15:36.12:603,36,0	1/1:4,22:25:63.22:1053,63,0	1/1:4,11:15:27.09:452,27,0	1/1:3,21:24:60.21:1004,60,0	1/1:7,24:31:57.19:953,57,0	1/1:3,13:16:39.13:652,39,0	1/1:7,20:27:57.19:953,57,0	1/1:9,25:34:75.26:1250,75,0	1/1:4,26:30:78.27:1292,78,0	1/1:1,11:11:24.08:401,24,0
chr10	25153487	.	AT	A	6255.44	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=7.131;DP=560;FS=10.994;HRun=3;HaplotypeScore=169.7956;InbreedingCoeff=0.9349;MQ=58.79;MQ0=0;MQRankSum=-9.111;QD=13.81;ReadPosRankSum=1.239;VQSLOD=3.1218;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:28.72:0,29,225	1/1:10,3:13:32.97:216,33,0	0/0:12,0:11:33.06:0,33,447	0/0:12,0:12:15.10:0,15,162	1/1:35,2:37:84.52:452,85,0	1/1:22,1:23:50.03:223,50,0	1/1:11,3:14:35.91:217,36,0	1/1:21,5:26:68.97:529,69,0	1/1:15,2:17:40.72:241,41,0	1/1:17,4:21:56.62:375,57,0	1/1:20,6:26:59.30:420,59,0	1/1:23,2:25:54.65:288,55,0	1/1:20,2:22:45.96:239,46,0	1/1:12,2:14:30.27:130,30,0	0/0:25,0:25:57.03:0,57,649	1/1:25,0:25:61.48:310,61,0	0/0:25,0:25:69.02:0,69,889	0/0:19,0:19:53.95:0,54,665	1/1:11,4:15:37.18:307,37,0	1/1:14,3:17:36.54:245,37,0	1/1:5,0:4:8.03:57,8,0	1/1:20,1:21:54.63:334,55,0	1/1:26,3:29:57:341,57,0	1/1:11,0:11:0.62:41,1,0	1/1:23,2:25:55.22:296,55,0	1/1:26,1:27:68.55:413,69,0	1/1:20,5:25:53.37:355,53,0	1/1:13,2:15:32.90:226,33,0
chr10	25153498	.	A	AACAAG	30150.21	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=4.218;DP=600;FS=0.517;HRun=0;HaplotypeScore=140.6515;InbreedingCoeff=0.9177;MQ=59.56;MQ0=0;MQRankSum=-9.890;QD=56.67;ReadPosRankSum=1.123;VQSLOD=5.2051;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,0:19:23.98:479,24,0	1/1:4,7:12:27.08:697,27,0	0/0:17,0:16:45.03:0,45,698	0/0:8,0:8:15.74:0,16,187	1/1:2,30:34:93.25:2596,93,0	1/1:3,22:26:51.07:1482,51,0	1/1:4,13:19:33.11:893,33,0	1/1:7,24:40:99:2373,113,0	1/1:3,13:16:42.13:1183,42,0	1/1:6,17:26:72.14:1889,72,0	1/1:6,21:28:71.96:1759,72,0	1/1:4,21:28:59.92:1682,60,0	1/1:4,17:22:40.64:1223,41,0	1/1:3,14:19:42.14:1250,42,0	1/1:1,0:29:42.31:369,42,0	1/1:1,22:23:54.17:1627,54,0	0/0:25,0:25:69.21:0,69,1305	0/0:18,0:18:42.13:0,42,852	1/1:5,12:20:53.51:1199,54,0	1/1:3,14:17:45.07:1154,45,0	1/1:1,4:5:2.80:90,3,0	1/1:1,12:18:45.13:1256,45,0	1/1:6,17:27:56.49:1495,56,0	1/1:2,8:13:5.56:140,6,0	1/1:2,18:22:56.59:1510,57,0	1/1:1,18:20:56.92:1543,57,0	1/1:7,16:27:47.53:1363,48,0	1/1:3,15:22:30.10:897,30,0
chr10	25154851	.	ATCT	A	1564.61	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.982;DP=617;FS=4.123;HRun=0;HaplotypeScore=93.3410;InbreedingCoeff=0.9983;MQ=76.73;MQ0=0;MQRankSum=-3.238;QD=41.17;ReadPosRankSum=1.429;VQSLOD=5.0302;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:42.14:0,42,931	0/0:9,0:9:24.08:0,24,532	0/0:11,0:11:29.59:0,30,550	0/0:19,0:19:49.65:0,50,973	0/0:27,0:26:78:0,78,1652	0/0:28,0:28:84.29:0,84,1840	0/0:17,0:17:48.16:0,48,1064	0/0:38,0:38:99:0,114,2352	0/0:20,0:20:54.17:0,54,1156	0/0:26,0:26:78.27:0,78,1709	0/0:18,0:18:51.17:0,51,1082	0/0:20,0:20:60.19:0,60,1266	0/0:22,0:22:66.19:0,66,1362	0/0:20,0:20:60.21:0,60,1319	0/0:21,0:21:57.17:0,57,1181	0/0:23,0:23:66.21:0,66,1412	1/1:0,26:26:75.26:1224,75,0	1/1:3,9:12:30.07:462,30,0	0/0:21,0:21:60.19:0,60,1291	0/0:29,0:29:87.30:0,87,1886	0/0:21,0:21:63.22:0,63,1397	0/0:24,0:24:69.22:0,69,1472	0/0:22,0:22:66.23:0,66,1454	0/0:20,0:18:57.18:0,57,1223	0/0:26,0:26:78.27:0,78,1708	0/0:28,0:28:81.23:0,81,1750	0/0:38,0:38:99:0,111,2449	0/0:14,0:14:39.13:0,39,865
chr10	25154943	.	G	GA	12704.24	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-5.507;DP=563;FS=0.000;HRun=9;HaplotypeScore=96.7913;InbreedingCoeff=0.9872;MQ=78.52;MQ0=0;MQRankSum=-1.709;QD=25.06;ReadPosRankSum=0.751;VQSLOD=4.6833;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,17:18:48.13:530,48,0	1/1:0,12:12:30.08:332,30,0	0/0:19,0:19:24.83:0,25,205	0/0:13,0:12:21.34:0,21,162	1/1:5,28:33:76.48:805,76,0	1/1:4,32:37:70.04:984,70,0	1/1:3,16:19:45.12:498,45,0	1/1:5,28:34:60.98:865,61,0	1/1:0,8:9:26.91:280,27,0	1/1:3,19:22:57.12:611,57,0	1/1:4,20:24:54.11:584,54,0	1/1:2,15:17:42.06:457,42,0	1/1:6,23:29:60.15:656,60,0	1/1:1,19:20:48.13:531,48,0	1/1:2,16:18:42.11:465,42,0	1/1:5,13:18:13.05:372,13,0	0/0:2,0:12:20.37:0,20,60	0/0:1,0:12:22.41:0,22,66	1/1:6,18:24:31.08:563,31,0	1/1:5,26:31:49.13:754,49,0	1/1:1,10:11:27.07:299,27,0	1/1:7,17:24:30.08:331,30,0	1/1:1,15:16:42.11:465,42,0	1/1:4,8:11:21.06:232,21,0	1/1:1,21:22:63.17:697,63,0	1/1:3,20:23:57.15:630,57,0	1/1:5,17:22:36.08:398,36,0	1/1:1,11:12:33.09:365,33,0
chr10	25156999	.	AT	A	509.24	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.526;DP=566;FS=9.348;HRun=9;HaplotypeScore=53.1756;InbreedingCoeff=0.8813;MQ=69.76;MQ0=0;MQRankSum=-1.082;QD=19.59;ReadPosRankSum=-0.568;VQSLOD=3.4387;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,24:26:66.03:604,66,0	0/0:7,0:7:21.06:0,21,242	0/0:6,0:6:9.02:0,9,100	0/0:11,0:10:12.02:0,12,124	0/0:36,0:36:99:0,102,1177	0/0:18,0:18:48.13:0,48,544	0/0:11,0:11:30.08:0,30,336	0/0:26,0:26:57.17:0,57,657	0/0:14,0:14:36.11:0,36,416	0/0:23,1:25:38.56:0,39,678	0/0:27,0:27:81.24:0,81,935	0/0:30,0:30:78.23:0,78,900	0/0:17,0:17:48.14:0,48,554	0/0:15,0:16:44.97:0,45,499	0/0:22,0:22:63.18:0,63,717	0/0:17,1:18:17.67:0,18,457	0/0:13,0:13:33.06:0,33,366	0/0:21,1:22:35.70:0,36,654	0/0:23,0:23:57.17:0,57,658	0/0:33,2:35:38.34:0,38,949	0/0:6,0:6:12.04:0,12,138	0/0:17,0:17:45.12:0,45,511	0/0:27,0:27:78.21:0,78,882	0/0:21,0:21:54.16:0,54,623	0/0:21,0:21:60.18:0,60,693	0/0:27,0:27:75.22:0,75,866	0/0:27,0:27:72.20:0,72,821	0/0:17,0:17:30.09:0,30,344
chr10	25157231	.	A	AT	12325.32	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-9.013;DP=573;FS=0.465;HRun=9;HaplotypeScore=55.6449;InbreedingCoeff=0.9919;MQ=78.92;MQ0=0;MQRankSum=-2.035;QD=25.00;ReadPosRankSum=1.379;VQSLOD=5.5635;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:74.98:0,75,650	1/1:0,6:7:17.88:180,18,0	0/0:12,0:12:20.66:0,21,181	0/0:16,0:16:32.85:0,33,273	1/1:2,29:31:64.14:882,64,0	1/1:4,20:24:63.16:690,63,0	1/1:3,19:22:57.15:631,57,0	1/1:7,0:36:82.83:439,83,0	1/1:3,13:16:36.10:398,36,0	1/1:5,16:21:51.13:559,51,0	1/1:3,14:17:42.11:460,42,0	1/1:2,21:23:51.14:564,51,0	1/1:5,9:14:29.90:324,30,0	1/1:6,14:20:45.12:496,45,0	0/0:26,0:26:71.97:0,72,625	1/1:1,15:16:45.12:498,45,0	1/1:2,20:23:66.01:710,66,0	1/1:2,25:27:75.20:830,75,0	1/1:6,12:19:38.94:412,39,0	1/1:3,24:27:46.14:737,46,0	1/1:2,9:11:21.06:232,21,0	1/1:0,15:15:42.03:438,42,0	1/1:1,21:23:33.90:572,34,0	1/1:5,15:20:19.07:439,19,0	1/1:4,19:23:54.15:597,54,0	1/1:4,14:18:39.08:414,39,0	1/1:8,21:29:34.07:591,34,0	1/1:2,9:11:21.06:232,21,0
chr10	25158619	.	G	GT	762.06	PASS	AB=0.923;AC=3;AF=0.054;AN=56;BaseQRankSum=-5.583;DP=678;FS=2.595;HRun=8;HaplotypeScore=62.3066;InbreedingCoeff=0.6523;MQ=74.76;MQ0=0;MQRankSum=-5.646;QD=18.59;ReadPosRankSum=2.118;VQSLOD=3.6538;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,28:29:75.21:855,75,0	0/0:6,0:6:17.99:0,18,159	0/0:15,0:15:26.90:0,27,231	0/0:18,0:18:41.69:0,42,358	0/0:32,0:32:84.03:0,84,764	0/0:36,0:36:99:0,99,896	0/1:11,1:12:7.61:8,0,192	0/0:29,0:29:63:0,63,569	0/0:25,0:25:66.01:0,66,600	0/0:37,0:37:99:0,105,961	0/0:22,0:22:63.03:0,63,576	0/0:25,0:25:66.03:0,66,604	0/0:30,0:30:81.03:0,81,741	0/0:21,0:21:57.03:0,57,521	0/0:28,0:28:75.03:0,75,686	0/0:25,0:25:66.01:0,66,600	0/0:14,0:14:42:0,42,378	0/0:22,0:22:57.02:0,57,522	0/0:30,0:30:68.97:0,69,615	0/0:43,0:43:99:0,111,1004	0/0:18,0:18:54.03:0,54,494	0/0:21,0:21:60.01:0,60,543	0/0:35,0:35:90.05:0,90,824	0/0:20,0:20:54.01:0,54,488	0/0:35,0:35:99:0,99,906	0/0:18,0:18:45.02:0,45,412	0/0:29,0:29:78:0,78,703	0/0:3,0:3:9:0,9,82
chr10	25159089	.	CTG	C	18398.47	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=10.800;DP=540;FS=8.276;HRun=0;HaplotypeScore=68.8965;InbreedingCoeff=0.9966;MQ=71.21;MQ0=7;MQRankSum=-1.446;QD=44.55;ReadPosRankSum=5.785;VQSLOD=6.2167;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:25:78.27:0,78,1575	1/1:0,8:8:18.06:294,18,0	0/0:9,0:9:27.09:0,27,463	0/0:7,0:7:18.06:0,18,356	1/1:0,28:28:78.27:1259,78,0	1/1:0,25:23:63.22:1028,63,0	1/1:0,23:23:57.19:930,57,0	0/0:30,0:30:90.31:0,90,1811	1/1:0,21:20:54.18:878,54,0	1/1:0,31:31:90.29:1444,90,0	1/1:0,21:21:63.22:1027,63,0	1/1:0,15:15:39.13:636,39,0	1/1:0,20:19:51.17:832,51,0	1/1:0,19:19:54.18:881,54,0	0/0:18,0:18:54.17:0,54,1061	1/1:0,13:13:39.13:636,39,0	0/0:18,0:18:54.19:0,54,1097	0/0:19,0:19:54.19:0,54,1083	1/1:0,11:11:33.11:539,33,0	1/1:0,37:37:99:1654,102,0	1/1:0,11:11:33.11:538,33,0	1/1:0,24:24:66.23:1075,66,0	1/1:0,18:17:48.16:783,48,0	1/1:0,11:11:33.11:538,33,0	1/1:0,25:23:69.24:1126,69,0	1/1:0,18:18:54.18:881,54,0	1/1:0,24:24:57.19:929,57,0	1/1:0,10:10:30.10:489,30,0
chr10	25162003	.	TA	T	181.32	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.851;DP=397;FS=3.123;HRun=7;HaplotypeScore=35.4433;InbreedingCoeff=0.9049;MQ=80.60;MQ0=0;MQRankSum=-2.930;QD=15.11;ReadPosRankSum=0.479;VQSLOD=2.6454;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,11:12:27.06:275,27,0	0/0:6,0:6:15.03:0,15,174	0/0:16,0:16:42.13:0,42,527	0/0:11,0:11:21.01:0,21,230	0/0:28,0:28:78.25:0,78,977	0/0:17,0:17:48.14:0,48,589	0/0:7,0:7:18.06:0,18,226	0/0:33,0:33:84.18:0,84,1002	0/0:13,0:13:39.12:0,39,491	0/0:17,0:17:48.15:0,48,593	0/0:18,0:18:45.14:0,45,554	0/0:12,0:12:33.09:0,33,402	0/0:13,0:13:36.12:0,36,453	0/0:17,0:17:45.13:0,45,552	0/0:15,0:15:45.14:0,45,566	0/0:7,0:7:21.07:0,21,264	0/0:16,0:16:39.12:0,39,491	0/0:12,0:12:36.10:0,36,440	0/0:17,0:17:45.13:0,45,554	0/0:17,0:17:48.12:0,48,565	0/0:15,0:15:36.09:0,36,438	0/0:12,0:12:30.08:0,30,364	0/0:9,0:9:18.06:0,18,227	0/0:7,0:7:21.02:0,21,246	0/0:12,0:12:36.12:0,36,453	0/0:19,0:19:54.16:0,54,658	0/0:16,0:16:48.14:0,48,590	0/0:3,0:3:9.03:0,9,113
chr10	25163850	.	GGAGAGAGAGAGAGAGA	G	7655.82	PASS	AB=0.938;AC=39;AF=0.780;AN=50;BaseQRankSum=6.794;DP=565;FS=51.713;HRun=0;HaplotypeScore=221.2100;InbreedingCoeff=0.6447;MQ=72.98;MQ0=15;MQRankSum=-5.564;QD=19.24;ReadPosRankSum=2.539;VQSLOD=2.4911;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:6.02:0,6,159	1/1:4,7:11:5.95:261,6,0	./.	./.	1/1:16,5:25:20.15:955,20,0	1/1:15,1:16:9.03:304,9,0	1/1:6,1:10:6.02:234,6,0	0/0:27,0:27:12.02:0,12,168	1/1:13,4:15:12.04:524,12,0	1/1:16,4:20:8.21:160,8,0	1/1:19,6:25:9.03:356,9,0	1/1:16,8:20:9.03:393,9,0	1/1:17,8:26:12.04:504,12,0	1/1:12,8:20:12.04:504,12,0	0/0:20,0:20:21.54:0,22,1172	1/1:16,1:22:5.81:242,6,0	0/0:22,0:21:35.29:0,35,1750	0/0:5,0:5:9:0,9,428	0/1:14,1:15:4.76:124,0,5	1/1:15,7:22:18.05:785,18,0	./.	1/1:14,9:23:11.95:299,12,0	1/1:16,8:25:11.98:392,12,0	1/1:13,11:25:12.04:412,12,0	1/1:14,8:21:6.02:262,6,0	1/1:15,3:17:6.01:262,6,0	1/1:16,6:20:15.05:635,15,0	1/1:6,0:6:3.01:47,3,0
chr10	25165727	.	C	CT	11255.73	PASS	AB=0.841;AC=49;AF=0.875;AN=56;BaseQRankSum=-9.127;DP=664;FS=4.834;HRun=9;HaplotypeScore=73.6098;InbreedingCoeff=0.4966;MQ=78.37;MQ0=4;MQRankSum=-1.332;QD=19.08;ReadPosRankSum=1.892;VQSLOD=5.2833;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:20,0:20:21.43:36,0,21	1/1:2,12:14:33.09:364,33,0	0/0:53,0:26:28.59:0,29,214	0/1:32,1:19:25.14:25,0,59	1/1:4,34:38:45.36:828,45,0	1/1:2,25:27:40.15:669,40,0	1/1:6,11:17:4.31:272,4,0	1/1:12,25:37:52.01:705,52,0	1/1:3,15:19:41.95:443,42,0	1/1:5,18:23:51.09:541,51,0	1/1:1,25:27:68.05:678,68,0	1/1:2,18:20:30.08:330,30,0	1/1:3,13:16:7.04:298,7,0	1/1:3,16:19:27.07:298,27,0	0/0:20,0:20:53.95:0,54,459	1/1:4,15:19:42.11:463,42,0	1/1:2,19:21:18.95:437,19,0	1/1:0,15:15:36.10:396,36,0	1/1:7,8:17:9:267,9,0	1/1:5,33:40:84.05:913,84,0	1/1:4,10:14:27.07:298,27,0	0/1:5,21:26:0.23:398,0,0	1/1:5,26:32:54.88:559,55,0	1/1:1,5:6:12.03:132,12,0	1/1:5,21:26:22.10:470,22,0	1/1:4,20:24:57.13:612,57,0	1/1:5,19:24:42.04:462,42,0	1/1:2,14:16:33.09:364,33,0
chr10	25166406	.	AT	A	325.83	PASS	AC=2;AF=0.037;AN=54;BaseQRankSum=3.642;DP=502;FS=6.686;HRun=8;HaplotypeScore=49.1594;InbreedingCoeff=0.7885;MQ=65.65;MQ0=3;MQRankSum=2.565;QD=18.10;ReadPosRankSum=-2.501;VQSLOD=2.5999;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:54.17:0,54,652	0/0:10,0:10:24.07:0,24,290	0/0:10,0:8:8.96:0,9,74	./.	0/0:37,0:37:90.27:0,90,1077	0/0:21,0:21:57.16:0,57,676	0/0:13,0:13:36.09:0,36,422	1/1:3,15:18:44.94:420,45,0	0/0:25,0:25:66.20:0,66,794	0/0:18,0:18:51.14:0,51,600	0/0:21,0:21:60.18:0,60,725	0/0:18,0:18:51.16:0,51,616	0/0:23,0:23:60.17:0,60,712	0/0:17,0:17:48.15:0,48,576	0/0:22,0:22:63.19:0,63,761	0/0:14,0:14:33.09:0,33,389	0/0:15,0:15:39.12:0,39,470	0/0:10,0:10:27.08:0,27,326	0/0:19,0:19:54.17:0,54,651	0/0:37,0:37:99:0,108,1283	0/0:10,1:11:4.11:0,4,323	0/0:13,0:13:36.11:0,36,435	0/0:14,1:15:13.11:0,13,425	0/0:11,0:11:33.10:0,33,397	0/0:22,0:22:54.14:0,54,629	0/0:26,0:26:72.21:0,72,860	0/0:26,0:26:72.18:0,72,848	0/0:4,0:4:12.02:0,12,133
chr10	25166595	.	C	CAAAACA	15701.88	PASS	AB=0.871;AC=49;AF=0.875;AN=56;BaseQRankSum=4.747;DP=616;FS=3.631;HRun=0;HaplotypeScore=240.2444;InbreedingCoeff=0.7844;MQ=52.84;MQ0=3;MQRankSum=-8.250;QD=29.40;ReadPosRankSum=2.747;VQSLOD=4.3884;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:27:99:277,0,366	1/1:9,0:14:37.16:564,37,0	0/0:24,0:18:44.04:0,44,471	0/0:31,0:21:34.01:0,34,505	1/1:26,0:41:99:1410,106,0	1/1:21,0:28:70.06:1118,70,0	1/1:6,0:13:12.04:224,12,0	1/1:24,0:30:31.22:595,31,0	1/1:17,0:21:57.45:881,57,0	1/1:7,1:22:38.16:509,38,0	1/1:15,0:23:54.73:645,55,0	1/1:14,0:21:61.39:650,61,0	1/1:17,0:26:72.48:897,72,0	1/1:15,0:21:52.64:619,53,0	0/0:27,0:27:75.21:0,75,1499	1/1:17,0:25:61.60:790,62,0	1/1:5,1:16:8.49:375,8,0	1/1:7,0:7:8.89:154,9,0	1/1:15,0:22:52.36:414,52,0	1/1:22,0:30:73.53:1094,74,0	1/1:5,0:9:16.97:100,17,0	1/1:10,0:18:43.31:484,43,0	1/1:15,0:24:54.56:659,55,0	1/1:14,0:21:44.90:759,45,0	1/1:10,0:16:46.88:678,47,0	1/1:13,0:26:64.55:808,65,0	1/1:16,0:22:56.11:889,56,0	1/1:6,0:7:11.70:110,12,0
chr10	25166597	.	A	AAAC	12557.51	PASS	AB=0.898;AC=43;AF=0.768;AN=56;BaseQRankSum=8.270;DP=616;FS=0.865;HRun=0;HaplotypeScore=220.9746;InbreedingCoeff=0.3247;MQ=51.90;MQ0=3;MQRankSum=-10.483;QD=23.38;ReadPosRankSum=6.217;VQSLOD=4.1955;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:28:82.68:83,0,223	1/1:9,5:14:35.90:483,36,0	0/0:23,0:17:48.99:0,49,697	0/0:30,0:20:43.48:0,43,587	1/1:27,15:42:95.57:1070,96,0	1/1:18,11:29:47.43:801,47,0	0/1:7,4:11:11.29:218,0,11	0/1:30,0:29:26.25:511,0,26	1/1:12,10:22:57.31:722,57,0	0/1:17,3:20:2.67:247,0,3	1/1:18,5:23:54.21:509,54,0	1/1:19,3:22:31.49:549,31,0	1/1:17,9:26:71.53:724,72,0	1/1:12,8:21:49.42:637,49,0	0/0:26,0:26:78.24:0,78,1266	1/1:16,7:23:59.63:549,60,0	1/1:16,0:16:26.83:309,27,0	1/1:8,0:7:17.13:169,17,0	0/1:22,2:24:10.08:316,0,10	1/1:20,10:30:63.14:806,63,0	0/1:11,0:11:26.07:76,0,26	0/1:13,6:19:18.74:462,0,19	1/1:20,5:24:31:572,31,0	1/1:12,9:21:42.42:524,42,0	1/1:9,6:16:45.94:607,46,0	1/1:23,4:26:15.22:630,15,0	1/1:11,11:22:55.21:774,55,0	1/1:4,3:7:11.52:210,12,0
chr10	25166599	.	AAAC	A	6268.76	PASS	AB=0.955;AC=27;AF=0.482;AN=56;BaseQRankSum=-6.594;DP=581;FS=4.138;HRun=0;HaplotypeScore=224.4109;InbreedingCoeff=-0.5299;MQ=54.32;MQ0=3;MQRankSum=1.139;QD=12.69;ReadPosRankSum=-9.476;VQSLOD=1.8727;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:26:63.02:464,63,0	0/1:12,0:12:61.96:62,0,73	0/0:23,0:18:53.85:0,54,1031	0/0:27,0:19:41.20:0,41,839	0/1:39,3:42:99:594,0,152	0/1:24,0:25:99:302,0,192	0/0:11,0:11:5.16:0,5,39	0/1:24,0:23:57.52:58,0,79	0/1:18,3:21:99:222,0,115	0/1:20,0:20:74.61:261,0,75	0/1:19,1:21:49.54:423,0,50	0/1:15,6:22:23.66:539,0,24	0/1:24,2:26:95.17:377,0,95	0/1:20,0:20:87.54:109,0,88	0/0:26,0:26:78.22:0,78,1798	0/1:22,1:23:99:284,0,136	0/1:15,0:15:7.06:7,0,60	0/1:8,0:7:13.48:72,0,13	0/1:23,0:23:37.58:366,0,38	0/1:25,2:29:99:361,0,131	1/1:10,0:10:11.68:162,12,0	0/1:18,0:19:74.26:300,0,74	0/1:19,3:22:64.23:372,0,64	0/1:17,1:19:88.40:136,0,88	0/1:13,0:15:50.51:167,0,51	0/1:22,3:26:68.17:387,0,68	0/1:19,1:20:99:199,0,123	1/1:4,0:4:3.86:46,4,0
chr10	25166600	.	AAC	A	3136.20	PASS	AB=0.905;AC=27;AF=0.482;AN=56;BaseQRankSum=-8.549;DP=569;FS=6.529;HRun=0;HaplotypeScore=224.6459;InbreedingCoeff=-0.4614;MQ=54.35;MQ0=3;MQRankSum=1.126;QD=6.47;ReadPosRankSum=-8.955;VQSLOD=-0.3130;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,0:26:65.18:346,65,0	0/1:11,1:12:13.26:13,0,85	0/0:22,0:18:50.38:0,50,881	0/0:25,1:19:38.67:0,39,653	0/1:36,5:41:99:210,0,129	0/1:21,2:23:77.47:135,0,77	0/0:11,0:11:10.35:0,10,67	1/1:23,1:23:21.50:369,21,0	0/1:18,3:21:67.71:68,0,105	0/1:19,1:20:48.45:142,0,48	0/1:16,5:21:14.71:191,0,15	0/1:19,3:22:37.46:214,0,37	0/1:20,5:25:60.21:151,0,60	0/1:18,2:20:27.33:27,0,151	0/0:25,0:25:75.19:0,75,1450	0/1:17,5:22:46.10:114,0,46	0/1:16,0:16:2.04:194,0,2	1/1:8,0:7:8.16:135,8,0	0/1:17,6:23:30.58:260,0,31	0/1:26,2:28:49.96:134,0,50	0/1:7,1:8:4.02:65,0,4	0/1:17,2:19:65.09:105,0,65	0/1:20,3:22:25.99:113,0,26	0/1:17,1:18:33.43:52,0,33	0/1:15,0:15:28.70:29,0,66	0/1:24,2:25:68.98:131,0,69	0/1:18,2:20:84.64:85,0,126	0/1:4,0:4:18.24:18,0,66
chr10	25166601	.	AC	A	4623.19	PASS	AB=0.990;AC=45;AF=0.804;AN=56;BaseQRankSum=3.271;DP=566;FS=34.243;HRun=3;HaplotypeScore=214.7879;InbreedingCoeff=0.4862;MQ=54.46;MQ0=3;MQRankSum=-3.563;QD=9.36;ReadPosRankSum=3.214;VQSLOD=0.3110;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:26:64.61:278,65,0	0/1:11,0:11:5.91:47,0,6	0/0:22,0:18:42.76:0,43,645	0/0:25,0:18:22.34:0,22,353	1/1:42,0:42:31.75:311,32,0	1/1:22,0:22:46.26:227,46,0	0/1:11,0:11:4.23:4,0,19	1/1:15,8:24:66.07:535,66,0	1/1:22,0:22:9.84:154,10,0	1/1:19,1:20:12.28:197,12,0	1/1:21,0:21:30.50:208,31,0	1/1:22,0:22:33.93:251,34,0	1/1:25,0:25:44.82:251,45,0	0/1:18,1:19:22.19:70,0,22	0/0:25,0:25:75.16:0,75,1002	1/1:22,0:22:48.52:229,49,0	1/1:12,4:16:26.92:167,27,0	1/1:6,2:7:17.02:111,17,0	1/1:21,0:21:35.76:304,36,0	1/1:28,0:28:40.02:227,40,0	1/1:7,0:7:14.80:107,15,0	1/1:19,0:19:15.77:194,16,0	1/1:23,0:22:37.81:164,38,0	1/1:18,0:18:25.79:121,26,0	1/1:16,0:16:17.66:115,18,0	1/1:26,0:25:27.48:232,27,0	0/1:20,0:20:15.29:109,0,15	0/1:4,0:4:10.20:10,0,33
chr10	25166602	.	C	CAAAAAAAAA	25767.59	PASS	AB=1.000;AC=49;AF=0.875;AN=56;BaseQRankSum=2.048;DP=567;FS=2.247;HRun=6;HaplotypeScore=219.1036;InbreedingCoeff=0.8020;MQ=54.36;MQ0=3;MQRankSum=-7.504;QD=51.85;ReadPosRankSum=0.301;VQSLOD=0.4256;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:25:29.97:30,0,709	1/1:9,3:12:30.09:823,30,0	0/0:22,0:18:48.83:0,49,1037	0/0:23,0:16:9.80:0,10,548	1/1:31,11:42:99:2345,117,0	1/1:11,11:22:56.11:1745,56,0	1/1:9,2:11:15.04:415,15,0	1/1:25,0:24:67.35:658,67,0	1/1:16,7:23:66.04:1524,66,0	1/1:17,3:20:51.13:1043,51,0	1/1:17,4:21:58.69:1207,59,0	1/1:21,1:22:65.93:1017,66,0	1/1:18,7:25:72.21:1730,72,0	1/1:17,3:20:51.11:1070,51,0	0/0:25,0:25:68.42:0,68,1966	1/1:15,7:22:63.18:1549,63,0	1/1:17,0:17:27.51:482,28,0	1/1:8,0:7:17.98:243,18,0	1/1:20,1:21:60.05:820,60,0	1/1:19,9:28:77.73:1849,78,0	1/1:8,0:8:18.01:261,18,0	1/1:17,2:19:56.82:939,57,0	1/1:20,3:22:55.75:923,56,0	1/1:11,7:18:42.04:1188,42,0	1/1:11,5:16:47.54:1038,48,0	1/1:23,2:24:71.79:1149,72,0	1/1:13,7:20:54.63:1507,55,0	1/1:4,0:4:12.04:213,12,0
chr10	25168147	.	AAC	A	2788.70	PASS	AB=0.579;AC=41;AF=0.976;AN=42;BaseQRankSum=1.683;DP=140;FS=0.000;HRun=0;HaplotypeScore=52.0154;InbreedingCoeff=-0.1047;MQ=32.61;MQ0=10;MQRankSum=-1.391;QD=22.86;ReadPosRankSum=1.195;VQSLOD=3.8189;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:3,8:9:2.90:244,0,3	1/1:0,2:2:6.02:88,6,0	./.	./.	1/1:0,7:7:15.05:220,15,0	1/1:0,2:2:3.01:44,3,0	./.	./.	./.	1/1:1,3:4:9.03:132,9,0	1/1:0,14:13:35.95:428,36,0	1/1:0,3:1:3.01:44,3,0	1/1:0,5:5:12.04:176,12,0	./.	1/1:0,3:3:9.03:132,9,0	1/1:1,3:4:5.99:65,6,0	1/1:1,4:5:9.03:132,9,0	1/1:3,4:6:9.03:132,9,0	1/1:6,2:1:3.01:44,3,0	1/1:0,10:8:21.03:285,21,0	1/1:1,6:6:3.01:44,3,0	1/1:0,5:5:9.03:130,9,0	1/1:0,11:9:21.03:284,21,0	1/1:1,2:3:2.96:19,3,0	1/1:0,6:2:6.02:88,6,0	1/1:0,2:1:3.01:44,3,0	1/1:0,3:3:6.02:88,6,0	./.
chr10	25168179	.	A	AG	1916.33	PASS	AC=36;AF=0.900;AN=40;BaseQRankSum=0.910;DP=97;FS=0.000;HRun=4;HaplotypeScore=82.7571;InbreedingCoeff=0.2555;MQ=25.89;MQ0=4;MQRankSum=-0.146;QD=23.95;ReadPosRankSum=2.183;VQSLOD=2.3864;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,1:4:3.01:40,3,0	1/1:1,1:2:3.01:40,3,0	1/1:4,0:1:3.01:30,3,0	0/0:7,0:2:4.50:0,4,22	1/1:2,4:6:12.04:152,12,0	./.	./.	./.	./.	0/0:3,0:3:0.47:0,0,1	1/1:4,7:11:21.07:281,21,0	1/1:0,3:2:6.02:80,6,0	1/1:1,5:6:12.93:162,13,0	./.	1/1:2,2:4:8.99:100,9,0	1/1:2,1:3:8.95:81,9,0	1/1:1,2:3:6.02:80,6,0	1/1:0,4:4:12.04:161,12,0	1/1:3,2:3:6.02:79,6,0	1/1:1,7:7:21.07:280,21,0	./.	1/1:1,2:3:6.02:80,6,0	1/1:1,8:7:18.06:240,18,0	./.	1/1:0,3:1:3.01:40,3,0	1/1:0,1:1:3.01:41,3,0	1/1:0,1:1:3.01:40,3,0	./.
chr10	25168214	.	ACAT	A	2393.64	PASS	AB=0.666;AC=30;AF=0.789;AN=38;BaseQRankSum=-0.154;DP=84;FS=0.000;HRun=0;HaplotypeScore=60.7825;InbreedingCoeff=0.0006;MQ=24.01;MQ0=22;MQRankSum=-0.997;QD=37.40;ReadPosRankSum=1.586;VQSLOD=3.9971;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	1/1:0,1:1:3.01:56,3,0	0/0:3,0:1:3.01:0,3,43	./.	0/1:2,4:6:33.76:220,0,34	./.	./.	1/1:1,2:1:3.01:56,3,0	./.	0/1:2,1:2:44.02:50,0,44	0/1:2,7:8:26.50:365,0,27	1/1:0,2:2:6.02:111,6,0	1/1:0,4:4:12.04:219,12,0	1/1:1,1:1:3.01:56,3,0	1/1:0,2:2:6.02:111,6,0	1/1:1,5:5:15.05:278,15,0	./.	0/0:3,0:1:3.01:0,3,38	1/1:1,1:1:3.01:56,3,0	1/1:0,7:7:21.07:390,21,0	./.	1/1:0,3:3:6.02:111,6,0	1/1:1,5:5:15.05:270,15,0	./.	0/1:2,1:2:41.06:50,0,41	1/1:1,1:1:3.01:56,3,0	1/1:2,1:1:3.01:56,3,0	./.
chr10	25170350	.	T	TAC	6247.58	PASS	AB=0.567;AC=41;AF=0.732;AN=56;BaseQRankSum=-9.036;DP=345;FS=48.929;HRun=0;HaplotypeScore=46.0296;InbreedingCoeff=0.8578;MQ=84.39;MQ0=2;MQRankSum=-1.009;QD=28.66;ReadPosRankSum=6.042;VQSLOD=3.4660;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:33.08:0,33,392	1/1:2,2:4:9.03:144,9,0	0/0:18,0:17:24.07:0,24,291	0/0:25,0:19:17.19:0,17,136	1/1:0,18:18:33.11:538,33,0	1/1:1,5:6:15.05:245,15,0	1/1:7,9:16:18.06:294,18,0	0/0:31,0:31:50.72:0,51,798	1/1:2,6:8:15.05:245,15,0	1/1:5,8:13:24.08:387,24,0	1/1:0,11:11:30.10:489,30,0	1/1:4,8:12:12.04:195,12,0	1/1:9,2:11:21.04:286,21,0	0/1:4,13:17:6.83:410,0,7	0/0:9,0:9:12.01:0,12,123	1/1:3,5:8:15.05:245,15,0	0/0:14,0:14:23.98:0,24,268	0/0:12,0:13:20.90:0,21,235	1/1:5,8:13:24.01:348,24,0	1/1:2,7:9:18.06:294,18,0	1/1:0,4:4:6.02:98,6,0	1/1:3,10:13:15.05:245,15,0	1/1:3,7:10:18.06:294,18,0	1/1:2,7:8:12.04:196,12,0	1/1:2,6:8:15.04:223,15,0	1/1:2,8:10:24.04:338,24,0	1/1:2,10:12:27.09:440,27,0	1/1:0,6:6:18.06:294,18,0
chr10	25170386	.	C	CAT	927.44	PASS	AB=1.000;AC=6;AF=0.130;AN=46;BaseQRankSum=-3.840;DP=167;FS=32.284;HRun=0;HaplotypeScore=42.8399;InbreedingCoeff=0.2868;MQ=56.76;MQ0=2;MQRankSum=-3.629;QD=17.50;ReadPosRankSum=-3.372;VQSLOD=0.6871;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:18.06:0,18,228	0/0:2,0:2:3:0,3,25	./.	0/0:10,0:4:2.97:0,3,21	0/0:7,0:7:3.01:0,3,38	0/0:3,0:3:6.02:0,6,76	0/0:2,0:2:6.02:0,6,76	1/1:22,10:32:62.34:830,62,0	0/0:5,0:5:12.04:0,12,153	0/0:8,0:8:15.05:0,15,191	0/0:8,0:8:12.04:0,12,151	./.	0/0:2,0:2:3.01:0,3,38	0/0:3,0:3:6.01:0,6,63	1/1:0,5:5:12.04:201,12,0	0/0:4,0:4:9.03:0,9,115	0/0:10,1:12:2.54:0,3,38	0/1:9,0:9:2.89:3,0,156	0/0:10,0:9:15.03:0,15,170	0/0:3,0:3:9.03:0,9,115	./.	./.	0/0:3,0:3:3:0,3,25	./.	0/1:7,0:7:9.71:10,0,124	0/0:2,0:2:3.01:0,3,38	0/0:7,0:7:18.04:0,18,213	0/0:5,0:5:6.02:0,6,75
chr10	25170404	.	TAC	T	265.27	PASS	AB=0.971;AC=8;AF=0.200;AN=40;BaseQRankSum=-0.210;DP=112;FS=2.106;HRun=0;HaplotypeScore=35.2375;InbreedingCoeff=0.0122;MQ=51.95;MQ0=4;MQRankSum=-0.322;QD=5.10;ReadPosRankSum=-1.722;VQSLOD=1.8220;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:29.60:0,30,360	./.	1/1:2,0:1:2.37:8,2,0	./.	0/0:1,0:1:2.99:0,3,24	0/0:1,0:1:2.99:0,3,24	0/0:2,0:2:6:0,6,51	0/1:26,4:29:99:313,0,202	0/1:5,0:5:8.95:9,0,131	0/0:6,0:6:14.98:0,15,132	./.	./.	0/0:2,0:2:2.99:0,3,23	0/0:1,0:1:3:0,3,25	0/0:6,0:6:5.63:0,6,276	0/0:3,0:3:9:0,9,100	0/0:9,0:9:2.28:0,2,20	0/1:9,0:9:3.33:3,0,123	0/0:5,0:3:5.99:0,6,50	0/0:3,0:3:8.99:0,9,75	./.	./.	./.	./.	0/1:4,0:4:16.79:17,0,63	0/0:1,0:1:3:0,3,28	0/0:2,0:2:5.99:0,6,49	1/1:2,0:2:2.97:20,3,0
chr10	25170524	.	G	GT	6907.06	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=2.280;DP=319;FS=16.931;HRun=3;HaplotypeScore=51.4009;InbreedingCoeff=0.8669;MQ=102.82;MQ0=0;MQRankSum=-5.350;QD=29.39;ReadPosRankSum=5.989;VQSLOD=2.8879;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,14:18:35.34:581,35,0	1/1:1,2:3:6.02:77,6,0	0/0:21,0:21:39.20:0,39,538	0/0:16,0:16:21.74:0,22,369	1/1:3,12:15:30.05:368,30,0	1/1:1,15:16:39.12:498,39,0	1/1:1,6:7:15.05:191,15,0	0/0:23,0:23:56.50:0,57,286	1/1:0,12:12:30.10:384,30,0	1/1:3,6:9:18.55:239,19,0	1/1:0,9:9:24.04:291,24,0	1/1:1,14:15:33.04:400,33,0	1/1:3,8:11:21.86:269,22,0	1/1:1,8:9:17.92:207,18,0	0/0:23,0:23:69.15:0,69,798	1/1:0,3:3:9.03:115,9,0	1/1:4,13:17:39.04:480,39,0	1/1:1,13:14:30.10:383,30,0	1/1:0,7:7:21.05:255,21,0	1/1:2,15:17:45.14:578,45,0	1/1:1,6:7:15.05:192,15,0	0/0:1,0:1:0.47:0,0,1	1/1:0,6:6:15.05:193,15,0	1/1:0,4:4:12.04:154,12,0	1/1:1,3:4:9.03:115,9,0	1/1:2,9:11:24.07:292,24,0	1/1:2,16:18:41.64:537,42,0	1/1:1,2:3:9.03:109,9,0
chr10	25171997	.	CGAGA	C	120.37	PASS	AB=0.913;AC=6;AF=0.120;AN=50;BaseQRankSum=1.792;DP=471;FS=38.914;HRun=0;HaplotypeScore=82.3855;InbreedingCoeff=0.3707;MQ=73.92;MQ0=7;MQRankSum=-0.646;QD=1.42;ReadPosRankSum=0.499;VQSLOD=-0.2973;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:17:18.03:0,18,296	./.	./.	0/1:34,0:19:0:0,0,0	0/0:27,0:27:21.03:0,21,363	0/0:16,0:16:18.06:0,18,371	0/0:9,0:9:9:0,9,142	./.	1/1:8,4:12:6.02:92,6,0	0/0:19,0:19:12.04:0,12,208	0/0:13,0:12:6.02:0,6,101	0/0:10,0:10:9.03:0,9,184	0/0:18,0:18:15.02:0,15,236	0/1:15,4:19:33.88:80,0,34	0/0:18,0:18:3.01:0,3,61	0/0:14,0:13:11.99:0,12,221	1/1:14,0:20:6.01:56,6,0	0/0:10,0:10:3.01:0,3,53	0/0:14,0:13:7.84:0,8,140	0/0:25,0:25:6.02:0,6,113	0/0:11,0:11:5.99:0,6,49	0/0:9,0:9:6.02:0,6,132	0/0:29,0:28:2.88:0,3,63	0/0:17,0:17:21.06:0,21,329	0/0:19,0:19:21.07:0,21,401	0/0:16,0:16:10.84:0,11,122	0/0:15,0:16:23.77:0,24,389	0/0:14,0:13:9.03:0,9,181
chr10	25172147	.	TC	T	1139.80	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.554;DP=629;FS=17.729;HRun=1;HaplotypeScore=57.5680;InbreedingCoeff=0.9955;MQ=87.97;MQ0=0;MQRankSum=-1.532;QD=36.77;ReadPosRankSum=-5.034;VQSLOD=0.7771;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:84.29:0,84,1338	0/0:15,0:15:45.15:0,45,719	0/0:22,0:22:66.19:0,66,1018	0/0:26,0:26:66.95:0,67,1015	0/0:25,0:25:75.22:0,75,1150	0/0:29,0:29:87.30:0,87,1367	0/0:28,0:28:84.27:0,84,1316	1/1:0,31:31:93.27:1235,93,0	0/0:13,0:13:39.12:0,39,600	0/0:26,0:26:75.24:0,75,1159	0/0:11,0:11:33.11:0,33,527	0/0:23,0:23:69.22:0,69,1079	0/0:25,0:25:75.26:0,75,1198	0/0:26,0:26:78.22:0,78,1174	0/0:29,0:29:87.28:0,87,1366	0/0:14,0:14:42.13:0,42,648	0/0:17,0:17:51.17:0,51,814	0/0:14,0:13:36.12:0,36,562	0/0:26,0:26:78.08:0,78,1138	0/0:20,0:20:60.17:0,60,912	0/0:23,0:23:66.23:0,66,1051	0/0:26,0:26:75.26:0,75,1198	0/0:27,0:27:81.28:0,81,1292	0/0:16,0:16:45.15:0,45,718	0/0:22,0:22:66.23:0,66,1053	0/0:28,0:28:84.28:0,84,1318	0/0:31,0:31:93.32:0,93,1486	0/0:7,0:7:21.07:0,21,329
chr10	25173499	.	AG	A	5872.48	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-4.368;DP=304;FS=2.141;HRun=8;HaplotypeScore=43.7567;InbreedingCoeff=0.8703;MQ=78.57;MQ0=2;MQRankSum=-1.745;QD=23.40;ReadPosRankSum=4.703;VQSLOD=4.9408;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,17:18:45.07:434,45,0	1/1:0,3:3:9.01:87,9,0	0/0:28,1:18:23.04:0,23,310	0/0:24,0:13:15.31:0,15,141	1/1:0,8:8:24.04:231,24,0	1/1:0,8:8:21.03:203,21,0	1/1:1,7:8:21.03:203,21,0	1/1:1,0:16:23.91:72,24,0	1/1:0,11:11:30.05:290,30,0	1/1:0,7:7:21.02:198,21,0	1/1:0,8:8:20.98:193,21,0	1/1:2,8:10:24.04:232,24,0	1/1:0,6:6:15.02:145,15,0	1/1:1,10:11:21.03:203,21,0	1/1:0,8:8:24.04:231,24,0	1/1:2,8:10:24.03:230,24,0	1/1:0,12:12:33.05:319,33,0	1/1:0,3:3:9.01:87,9,0	1/1:3,3:6:9.01:87,9,0	1/1:3,10:13:26.73:234,27,0	1/1:1,7:8:18.03:174,18,0	1/1:1,19:20:53.83:521,54,0	1/1:2,6:8:15.02:145,15,0	1/1:1,7:8:21.03:203,21,0	1/1:0,12:12:33.05:318,33,0	1/1:0,9:9:27.04:256,27,0	1/1:0,14:14:42.07:405,42,0	1/1:0,6:6:18.03:174,18,0
chr10	25174905	.	AAC	A	1387.27	PASS	AB=0.976;AC=16;AF=0.296;AN=54;BaseQRankSum=0.362;DP=534;FS=0.586;HRun=0;HaplotypeScore=107.3160;InbreedingCoeff=0.4079;MQ=70.14;MQ0=15;MQRankSum=-1.090;QD=6.19;ReadPosRankSum=0.480;VQSLOD=2.7367;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:22,1:23:30.99:320,31,0	0/0:7,0:7:13.83:0,14,158	0/0:48,1:27:19.19:0,19,205	0/1:37,1:14:20.59:29,0,21	0/0:32,2:34:32.48:0,32,462	0/1:18,0:18:1.54:2,0,225	0/1:15,1:16:39.04:39,0,234	1/1:14,10:23:37.61:354,38,0	0/0:18,0:18:29.89:0,30,334	0/0:7,0:7:14.86:0,15,168	0/0:19,1:20:26.80:0,27,285	0/0:15,0:15:12.84:0,13,110	0/0:18,0:18:18.02:0,18,229	0/0:14,0:14:12.02:0,12,149	0/0:12,0:12:26.88:0,27,365	0/0:14,0:14:17.97:0,18,187	1/1:12,3:15:2.15:156,2,0	1/1:10,3:12:27.08:312,27,0	0/1:15,1:15:11.29:11,0,239	0/0:26,1:25:10.35:0,10,271	0/0:19,0:17:27.06:0,27,368	0/0:16,1:17:0.41:0,0,300	0/1:18,0:18:12.60:13,0,185	0/0:14,0:14:23.84:0,24,211	0/0:23,0:23:51.83:0,52,525	1/1:6,10:16:10.27:314,10,0	0/1:27,0:27:8.07:8,0,225	./.
chr10	25174929	.	GACAC	G	5246.41	PASS	AB=0.753;AC=40;AF=0.800;AN=50;BaseQRankSum=2.047;DP=516;FS=3.108;HRun=0;HaplotypeScore=123.2091;InbreedingCoeff=0.5310;MQ=55.30;MQ0=22;MQRankSum=3.010;QD=13.92;ReadPosRankSum=2.893;VQSLOD=4.7264;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:10.65:0,11,104	1/1:3,2:5:6.02:97,6,0	./.	./.	1/1:9,22:31:2.03:269,2,0	1/1:12,2:14:23.56:367,24,0	1/1:19,1:20:36.11:525,36,0	0/0:36,0:33:50.39:0,50,628	1/1:13,0:13:30.04:395,30,0	1/1:3,8:11:20.87:255,21,0	0/1:7,12:20:2.94:179,0,3	1/1:2,18:20:8.94:146,9,0	1/1:5,14:18:2.50:48,3,0	1/1:12,0:12:6.01:71,6,0	0/0:15,0:15:41.50:0,42,746	1/1:4,6:10:8.70:108,9,0	0/1:16,0:18:14.66:79,0,15	0/0:12,0:12:0.10:0,0,18	1/1:10,5:13:13.61:131,14,0	1/1:8,19:25:21.06:306,21,0	1/1:25,0:23:33.14:409,33,0	1/1:6,9:17:18.04:238,18,0	1/1:5,15:20:15.04:216,15,0	1/1:3,17:20:18.06:292,18,0	1/1:21,4:26:17.78:681,18,0	1/1:11,2:13:21.02:247,21,0	1/1:7,12:19:4.77:186,5,0	./.
chr10	25174955	.	CACAT	C	2119.30	PASS	AB=0.974;AC=23;AF=0.411;AN=56;BaseQRankSum=8.778;DP=521;FS=26.081;HRun=0;HaplotypeScore=130.6442;InbreedingCoeff=-0.3581;MQ=60.40;MQ0=18;MQRankSum=-0.074;QD=5.79;ReadPosRankSum=8.861;VQSLOD=0.4187;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:21:24.91:0,25,230	0/1:3,0:3:13:38,0,13	0/0:24,0:10:24.84:0,25,215	0/0:29,0:15:32.89:0,33,309	0/1:28,0:28:87.52:126,0,88	0/1:14,1:15:56.67:204,0,57	1/1:17,0:17:5.66:212,6,0	0/0:33,0:31:70.93:0,71,1077	0/1:15,0:15:38.18:162,0,38	0/1:10,0:9:15.45:108,0,15	0/1:20,0:20:39.92:88,0,40	0/1:23,0:23:53.41:53,0,100	0/1:18,0:17:12.28:12,0,69	0/1:9,8:17:32.51:33,0,120	0/0:19,0:19:39.20:0,39,895	0/1:10,0:10:37.30:37,0,57	0/0:21,0:21:23.55:0,24,245	0/1:11,0:10:3.13:3,0,100	0/1:14,0:11:30.99:31,0,130	1/1:21,0:20:20.90:184,21,0	0/1:27,0:26:92.73:177,0,93	0/1:12,1:13:2.51:142,0,3	0/1:22,0:21:33.18:99,0,33	0/1:22,0:22:72.89:144,0,73	0/1:22,1:23:13.68:307,0,14	0/1:17,0:16:60.56:61,0,117	0/1:20,0:20:63.32:63,0,151	0/0:8,0:8:20.91:0,21,162
chr10	25175004	.	TA	T	894.59	PASS	AB=0.905;AC=5;AF=0.089;AN=56;BaseQRankSum=5.969;DP=545;FS=5.904;HRun=9;HaplotypeScore=69.5976;InbreedingCoeff=0.8007;MQ=67.14;MQ0=1;MQRankSum=-3.110;QD=14.67;ReadPosRankSum=1.384;VQSLOD=3.8258;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:2,0:30:74.05:0,74,385	0/0:6,0:6:18.05:0,18,208	0/0:19,0:19:15.03:0,15,258	0/0:16,0:13:22.78:0,23,260	0/0:25,0:25:66.20:0,66,762	0/0:15,0:16:47.97:0,48,534	0/0:15,0:15:45.09:0,45,504	0/0:35,0:35:90.17:0,90,992	0/0:20,0:20:54.16:0,54,623	0/0:8,0:8:21.06:0,21,242	0/0:19,0:19:45.13:0,45,519	0/0:16,0:16:36.11:0,36,415	0/0:17,0:17:33.10:0,33,381	0/0:21,1:22:32.71:0,33,630	0/0:24,0:24:63.19:0,63,727	0/0:21,0:22:63.65:0,64,720	1/1:1,25:26:69.04:631,69,0	1/1:2,14:16:42.02:383,42,0	0/0:19,0:19:51.15:0,51,589	0/0:16,0:16:42.12:0,42,485	0/0:13,0:13:33.08:0,33,370	0/0:11,0:11:30.09:0,30,346	0/0:18,0:18:45.12:0,45,509	0/0:27,0:27:51.14:0,51,578	0/1:17,2:19:6.80:7,0,428	0/0:27,0:27:78.18:0,78,885	0/0:23,0:23:66.17:0,66,743	0/0:19,0:19:45.13:0,45,519
chr10	25178924	.	CAGACAGAA	C	266.13	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=3.594;DP=794;FS=6.526;HRun=0;HaplotypeScore=189.2422;InbreedingCoeff=0.9084;MQ=83.72;MQ0=0;MQRankSum=-4.205;QD=10.24;ReadPosRankSum=-0.157;VQSLOD=2.0182;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,157,5844	0/0:11,0:11:30.10:0,30,1115	0/0:40,0:40:81.28:0,81,2532	0/0:28,0:28:44.80:0,45,1458	0/0:34,0:34:93.31:0,93,3558	0/0:25,0:25:63.20:0,63,2305	0/0:32,0:32:81.28:0,81,3286	0/0:32,0:32:78.27:0,78,2903	0/0:32,0:32:60.38:0,60,2629	0/0:29,0:30:72.25:0,72,2783	0/0:24,0:24:66.23:0,66,2526	0/0:36,0:36:81.28:0,81,3155	0/0:29,0:29:75.26:0,75,2932	0/0:31,0:31:81.28:0,81,3187	0/0:36,0:36:96.32:0,96,3666	0/0:35,0:35:96.30:0,96,3711	1/1:6,14:20:9.03:237,9,0	1/1:6,0:6:6.02:132,6,0	0/0:23,0:23:57.19:0,57,2042	0/0:37,0:37:84.29:0,84,3255	0/0:42,0:42:99:0,105,4238	0/0:25,0:25:63.19:0,63,2377	0/0:17,0:17:42.14:0,42,1495	0/0:32,0:32:90.31:0,90,3681	0/0:26,0:26:69.22:0,69,2558	0/0:22,0:22:60.21:0,60,2264	0/0:27,0:27:66.21:0,66,2511	0/0:8,0:8:24.08:0,24,863
chr10	25183590	.	A	AT	204.97	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=1.503;DP=371;FS=1.190;HRun=9;HaplotypeScore=65.8009;InbreedingCoeff=0.5631;MQ=74.45;MQ0=0;MQRankSum=-3.031;QD=15.77;ReadPosRankSum=-0.193;VQSLOD=3.7322;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,11:13:27.07:298,27,0	0/0:2,0:2:6:0,6,52	0/0:7,0:7:2.58:0,3,59	0/0:6,0:6:7.40:0,7,40	0/0:13,0:13:5.62:0,6,210	0/0:23,0:23:56.99:0,57,495	0/0:13,0:13:32.97:0,33,282	0/0:28,0:28:74.96:0,75,646	0/0:11,0:11:26.99:0,27,234	0/0:12,0:12:29.99:0,30,258	0/0:23,0:23:47.97:0,48,417	0/0:8,0:8:20.98:0,21,179	0/0:17,0:17:41.99:0,42,364	0/0:13,0:13:38.97:0,39,334	0/0:7,0:7:18:0,18,156	0/0:9,0:9:14.97:0,15,127	0/0:28,0:28:77.98:0,78,677	0/0:21,0:21:41.97:0,42,365	0/0:12,0:12:32.97:0,33,281	0/0:22,0:22:53.97:0,54,469	0/0:6,0:6:14.98:0,15,126	0/0:3,0:3:9:0,9,78	0/0:15,0:15:38.97:0,39,339	0/0:3,0:3:6:0,6,52	0/0:14,0:14:35.99:0,36,313	0/0:11,0:11:29.99:0,30,260	0/0:27,0:27:65.98:0,66,573	0/0:4,0:4:12:0,12,104
chr10	25183613	.	TA	T	8912.06	PASS	AB=1.000;AC=51;AF=0.911;AN=56;BaseQRankSum=1.774;DP=356;FS=5.031;HRun=7;HaplotypeScore=43.8353;InbreedingCoeff=0.6948;MQ=78.95;MQ0=0;MQRankSum=-3.578;QD=26.45;ReadPosRankSum=3.581;VQSLOD=5.3138;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,10:11:30.06:302,30,0	1/1:0,4:4:9.02:92,9,0	0/0:10,0:10:8.42:0,8,174	0/1:6,0:7:28.49:28,0,54	1/1:0,17:17:48.11:490,48,0	1/1:2,17:19:42.09:429,42,0	1/1:2,9:11:27.06:276,27,0	1/1:0,25:25:75.17:764,75,0	1/1:1,11:12:24.05:245,24,0	1/1:0,11:11:33.07:337,33,0	1/1:0,16:16:48.11:490,48,0	1/1:1,9:10:24.05:245,24,0	1/1:2,11:13:27.06:275,27,0	1/1:2,14:16:42.10:429,42,0	0/0:9,0:9:24.08:0,24,300	1/1:1,9:10:24.05:245,24,0	1/1:2,21:23:63.14:643,63,0	1/1:1,14:15:39.09:398,39,0	1/1:1,13:14:39.05:387,39,0	1/1:0,18:18:54.12:547,54,0	1/1:1,6:7:18.04:183,18,0	1/1:0,6:6:18.04:183,18,0	1/1:0,17:17:45.10:457,45,0	1/1:0,3:3:9.02:92,9,0	1/1:0,13:13:36.08:367,36,0	1/1:0,8:8:24.05:245,24,0	1/1:2,23:25:60.13:612,60,0	1/1:1,5:6:15.03:153,15,0
chr10	25184061	.	T	TTA	1566.15	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=-8.543;DP=459;FS=2.162;HRun=0;HaplotypeScore=52.1485;InbreedingCoeff=0.6578;MQ=71.81;MQ0=0;MQRankSum=-1.012;QD=31.96;ReadPosRankSum=-4.592;VQSLOD=3.8285;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:87.27:0,87,1084	0/0:11,0:11:33.11:0,33,416	0/1:10,0:8:0:0,0,0	0/0:5,0:5:6.02:0,6,69	0/0:25,0:25:51.16:0,51,644	0/0:14,0:14:42.13:0,42,530	0/0:10,0:10:21.07:0,21,265	1/1:4,34:39:99:1660,105,0	0/0:10,0:10:18.05:0,18,214	0/0:19,0:19:33.09:0,33,390	0/0:30,0:30:84.26:0,84,1047	0/0:6,0:6:15.05:0,15,189	0/0:13,0:13:36.12:0,36,454	0/0:12,0:12:30.09:0,30,367	0/0:14,0:14:39.09:0,39,454	0/0:15,0:15:33.10:0,33,405	0/0:26,0:26:66.21:0,66,832	0/0:28,1:29:31.45:0,31,917	0/0:20,0:20:30.30:0,30,399	0/0:21,0:21:51.15:0,51,630	0/0:10,0:10:12.03:0,12,140	0/0:5,0:5:12.03:0,12,139	0/0:9,0:9:27.07:0,27,328	0/0:1,0:1:3.01:0,3,38	0/0:26,0:26:48.24:0,48,823	0/0:28,0:28:78.24:0,78,973	0/0:17,0:17:45.07:0,45,536	0/0:3,0:3:6.02:0,6,76
chr10	25188711	.	A	AC	1631.73	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-9.109;DP=755;FS=0.628;HRun=2;HaplotypeScore=71.3432;InbreedingCoeff=0.9979;MQ=87.04;MQ0=0;MQRankSum=-4.463;QD=40.79;ReadPosRankSum=1.367;VQSLOD=3.9048;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,40:40:99:1727,108,0	0/0:13,0:13:39.13:0,39,545	0/0:27,0:27:75.20:0,75,998	0/0:25,0:25:71.46:0,71,880	0/0:25,0:25:75.23:0,75,1023	0/0:25,0:25:72.24:0,72,1006	0/0:15,0:15:42.10:0,42,565	0/0:30,0:30:90.28:0,90,1225	0/0:26,0:26:78.24:0,78,1073	0/0:43,0:43:99:0,126,1697	0/0:18,0:18:51.17:0,51,708	0/0:27,0:27:81.26:0,81,1114	0/0:41,0:41:99:0,123,1716	0/0:25,0:25:75.23:0,75,1030	0/0:33,0:33:99:0,99,1333	0/0:36,0:36:99:0,105,1450	0/0:30,0:30:87.27:0,87,1194	0/0:18,0:18:51.17:0,51,713	0/0:19,0:19:55.43:0,55,759	0/0:40,0:40:99:0,120,1658	0/0:35,0:35:99:0,105,1445	0/0:24,0:24:72.22:0,72,989	0/0:22,0:22:66.22:0,66,919	0/0:24,0:24:72.24:0,72,1002	0/0:31,0:31:93.31:0,93,1301	0/0:26,0:26:78.25:0,78,1074	0/0:29,0:29:87.29:0,87,1216	0/0:8,0:8:24.08:0,24,336
chr10	25189558	.	GA	G	10343.73	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=10.016;DP=556;FS=3.719;HRun=9;HaplotypeScore=80.1248;InbreedingCoeff=0.9718;MQ=77.44;MQ0=0;MQRankSum=-2.127;QD=23.56;ReadPosRankSum=2.063;VQSLOD=5.7796;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,1:24:41.72:0,42,713	1/1:2,12:14:33.01:302,33,0	0/0:14,0:14:4.73:0,5,280	0/0:15,0:15:26.55:0,27,264	1/1:3,25:28:71.98:650,72,0	1/1:2,31:33:84.05:769,84,0	1/1:0,11:11:27.01:247,27,0	1/1:1,28:28:49.40:700,49,0	1/1:5,18:23:51.02:467,51,0	1/1:0,20:20:60.03:549,60,0	1/1:1,23:24:65.98:596,66,0	1/1:0,15:15:42.02:384,42,0	1/1:3,10:13:24.01:220,24,0	1/1:1,16:17:48.02:439,48,0	0/0:20,0:20:45.13:0,45,519	1/1:0,14:14:39.02:357,39,0	0/0:25,0:25:69.50:0,69,815	0/0:19,0:19:54.16:0,54,620	1/1:0,11:11:33:296,33,0	1/1:4,24:28:68.98:621,69,0	1/1:0,13:13:36.02:329,36,0	1/1:1,13:14:39.01:357,39,0	1/1:0,16:16:42.02:384,42,0	1/1:3,24:27:63.03:576,63,0	1/1:4,18:22:51.02:467,51,0	1/1:1,23:24:68.98:619,69,0	1/1:2,26:28:75.04:686,75,0	1/1:3,12:15:36.02:329,36,0
chr10	25189795	.	GA	G	14619.92	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=8.958;DP=507;FS=6.958;HRun=1;HaplotypeScore=50.0282;InbreedingCoeff=0.9980;MQ=85.48;MQ0=0;MQRankSum=-3.945;QD=38.27;ReadPosRankSum=3.362;VQSLOD=5.1925;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,17:17:39.13:543,39,0	1/1:0,9:9:24.08:335,24,0	0/0:21,0:21:53.34:0,53,822	0/0:11,0:11:26.26:0,26,431	1/1:0,22:22:60.01:786,60,0	1/1:0,21:21:54.18:753,54,0	1/1:0,18:18:33.11:460,33,0	0/0:22,0:22:66.21:0,66,1013	1/1:0,23:23:66.22:921,66,0	1/1:0,17:17:51.17:710,51,0	1/1:0,17:17:48.16:669,48,0	1/1:0,13:13:39.13:545,39,0	1/1:0,24:24:69.23:963,69,0	1/1:0,15:15:45.15:628,45,0	0/0:41,0:41:99:0,120,1912	1/1:0,17:17:48.16:670,48,0	0/0:21,0:21:63.21:0,63,1005	0/0:9,0:9:27.09:0,27,431	1/1:0,15:15:42.12:552,42,0	1/1:0,24:24:69.16:921,69,0	1/1:0,11:11:33.11:458,33,0	1/1:0,11:11:27.09:377,27,0	1/1:1,18:19:57.15:768,57,0	1/1:1,15:16:48.12:648,48,0	1/1:0,16:16:45.15:628,45,0	1/1:0,21:21:63.17:857,63,0	1/1:0,28:28:81.27:1131,81,0	1/1:0,8:8:21.07:293,21,0
chr10	25191462	.	A	AC	26568.02	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-12.512;DP=707;FS=1.768;HRun=0;HaplotypeScore=63.8254;InbreedingCoeff=0.9911;MQ=91.47;MQ0=0;MQRankSum=-9.076;QD=44.35;ReadPosRankSum=3.629;VQSLOD=5.3583;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,35:35:99:1628,102,0	1/1:0,12:12:27.09:431,27,0	0/0:35,0:35:91.92:0,92,1256	0/0:27,0:27:63.97:0,64,865	1/1:2,13:15:36.12:575,36,0	1/1:0,25:25:69.24:1103,69,0	1/1:0,27:27:75.26:1199,75,0	1/1:1,29:29:87.28:1366,87,0	1/1:0,30:30:84.29:1343,84,0	1/1:0,24:24:72.19:1096,72,0	1/1:0,16:16:45.15:717,45,0	1/1:1,28:29:84.29:1342,84,0	1/1:1,32:33:99:1571,99,0	1/1:0,31:31:87.30:1390,87,0	1/1:1,28:29:78.27:1247,78,0	1/1:0,26:26:75.26:1199,75,0	0/0:23,0:23:69.23:0,69,963	0/0:23,0:23:69.23:0,69,965	1/1:0,16:16:48.11:694,48,0	1/1:0,14:14:33.11:527,33,0	1/1:2,37:39:99:1726,108,0	1/1:0,19:19:51.17:803,51,0	1/1:0,19:19:51.17:815,51,0	1/1:1,25:26:72.25:1150,72,0	1/1:0,22:22:60.20:959,60,0	1/1:0,30:30:90.25:1386,90,0	1/1:0,48:48:99:2109,132,0	1/1:0,4:4:12.04:192,12,0
chr10	25193314	.	ATGTG	A	15919.48	PASS	AB=0.625;AC=43;AF=0.768;AN=56;BaseQRankSum=-4.677;DP=836;FS=3.287;HRun=0;HaplotypeScore=214.2635;InbreedingCoeff=0.8960;MQ=55.56;MQ0=15;MQRankSum=2.405;QD=25.59;ReadPosRankSum=3.761;VQSLOD=4.8709;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:27:50.72:0,51,1133	1/1:4,11:14:30.10:491,30,0	0/0:45,0:20:16.73:0,17,257	0/0:49,0:23:18.06:0,18,350	1/1:4,20:25:50.99:834,51,0	1/1:11,15:27:20.57:720,21,0	1/1:12,15:27:39.26:580,39,0	1/1:18,0:42:50.86:390,51,0	1/1:14,23:38:59.60:1090,60,0	1/1:13,25:40:78.12:1209,78,0	1/1:6,16:23:33.11:537,33,0	1/1:11,20:31:51.17:835,51,0	1/1:12,20:32:48.16:785,48,0	1/1:7,15:22:36.44:544,36,0	0/0:15,0:43:34.20:0,34,536	1/1:7,25:34:72.16:1121,72,0	0/0:10,0:27:57.20:0,57,1047	0/0:10,0:22:44.67:0,45,662	1/1:8,4:13:18.02:248,18,0	1/1:16,15:31:42.14:677,42,0	0/1:16,22:40:12.03:818,0,12	1/1:9,22:31:60.02:981,60,0	1/1:8,17:27:41.50:790,42,0	1/1:10,32:43:34.87:1091,35,0	1/1:8,11:20:29.94:458,30,0	1/1:7,16:27:57.16:825,57,0	1/1:7,12:22:43.95:650,44,0	1/1:3,7:10:15.05:246,15,0
chr10	25193826	.	TA	T	17531.63	PASS	AC=54;AF=1.000;AN=54;DP=494;FS=0.000;HRun=1;HaplotypeScore=194.1389;InbreedingCoeff=-0.0068;MQ=47.07;MQ0=0;QD=35.49;VQSLOD=4.2553;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,20:21:54.13:664,54,0	1/1:0,9:9:27.09:350,27,0	1/1:3,0:3:6.02:79,6,0	./.	1/1:2,19:21:60.10:722,60,0	1/1:2,28:30:88.47:1095,88,0	1/1:0,18:18:51.17:660,51,0	1/1:3,34:37:99:1350,106,0	1/1:0,19:19:57.15:720,57,0	1/1:2,17:19:54.64:687,55,0	1/1:0,22:22:62.90:715,63,0	1/1:0,11:11:33.11:427,33,0	1/1:3,22:25:72.67:891,73,0	1/1:3,13:16:46.01:559,46,0	1/1:2,31:33:99:1254,99,0	1/1:0,18:18:54.18:699,54,0	1/1:2,11:13:31.41:372,31,0	1/1:1,4:5:12.92:158,13,0	1/1:3,10:13:36.10:440,36,0	1/1:3,21:24:72.12:857,72,0	1/1:1,11:12:27:312,27,0	1/1:1,15:16:45.10:551,45,0	1/1:0,18:18:54.13:681,54,0	1/1:1,12:13:30.94:372,31,0	1/1:2,23:25:72.23:932,72,0	1/1:0,24:24:72.23:931,72,0	1/1:2,24:26:78.21:978,78,0	1/1:3,0:3:8.98:74,9,0
chr10	25195132	.	TGA	T	269.69	PASS	AB=0.950;AC=25;AF=0.500;AN=50;BaseQRankSum=3.720;DP=390;FS=10.480;HRun=0;HaplotypeScore=52.1360;InbreedingCoeff=0.4455;MQ=72.47;MQ0=7;MQRankSum=1.372;QD=1.36;ReadPosRankSum=0.786;VQSLOD=0.2823;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:15:9:0,9,92	0/0:13,0:12:0:0,0,0	./.	./.	1/1:22,0:22:2.22:7,2,0	1/1:17,0:20:11.48:60,11,0	1/1:11,1:12:3:32,3,0	0/0:25,0:25:14.84:0,15,101	1/1:8,1:10:5.85:46,6,0	0/0:14,0:14:2.90:0,3,16	0/1:14,3:16:1.30:49,0,1	1/1:10,1:11:3:32,3,0	1/1:9,0:11:5.62:37,6,0	0/0:9,0:12:3:0,3,26	0/0:13,0:13:5.99:0,6,48	1/1:7,4:12:11.86:110,12,0	./.	1/1:11,0:13:2.84:14,3,0	1/1:18,0:18:0.88:2,1,0	0/1:18,0:17:0:0,0,0	0/0:15,0:14:3:0,3,26	1/1:9,0:9:1.82:5,2,0	0/0:8,0:8:2.99:0,3,24	0/0:15,0:14:15.04:0,15,201	1/1:8,0:9:2.84:14,3,0	0/0:9,0:9:3.90:0,4,46	0/1:17,0:17:4.62:5,0,74	0/0:6,0:6:11.99:0,12,113
chr10	25196601	.	AACACACACAGACACAC	A	13062.03	PASS	AB=0.865;AC=43;AF=0.796;AN=54;BaseQRankSum=2.390;DP=702;FS=0.580;HRun=0;HaplotypeScore=298.8039;InbreedingCoeff=0.6452;MQ=62.80;MQ0=15;MQRankSum=-0.281;QD=26.71;ReadPosRankSum=2.661;VQSLOD=3.3102;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:13.12:0,13,698	1/1:7,4:11:24.05:635,24,0	0/0:53,0:23:36.90:0,37,606	0/0:55,0:37:18.81:0,19,1203	1/1:16,1:16:23.82:178,24,0	1/1:14,5:21:29.95:590,30,0	1/1:8,8:26:11.97:171,12,0	1/1:13,0:36:57.15:450,57,0	1/1:16,5:21:24.07:689,24,0	1/1:7,14:21:47.95:1319,48,0	1/1:4,12:16:6.02:267,6,0	1/1:16,15:31:14.54:669,15,0	1/1:23,7:31:54.01:1219,54,0	1/1:14,4:19:26.92:360,27,0	0/0:34,0:33:40.47:0,40,1105	1/1:25,5:32:60.08:1458,60,0	0/1:12,0:14:13.32:217,0,13	0/1:9,1:10:4.30:225,0,4	1/1:11,1:10:23.96:307,24,0	1/1:21,7:28:35.94:494,36,0	./.	1/1:16,7:23:20.91:165,21,0	1/1:11,0:21:9.03:213,9,0	0/1:19,3:23:9.96:110,0,10	1/1:11,4:14:24.01:444,24,0	1/1:15,5:21:51.03:1270,51,0	1/1:19,8:27:47.86:1114,48,0	1/1:9,1:10:18.03:496,18,0
chr10	25196609	.	CAG	C	4301.12	PASS	AB=0.824;AC=42;AF=0.778;AN=54;BaseQRankSum=0.105;DP=682;FS=3.752;HRun=0;HaplotypeScore=231.3308;InbreedingCoeff=0.6237;MQ=50.13;MQ0=17;MQRankSum=2.707;QD=9.27;ReadPosRankSum=3.417;VQSLOD=4.0875;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:15.77:0,16,193	1/1:10,1:11:2.02:105,2,0	0/0:47,0:17:36.86:0,37,353	0/0:43,0:25:18.41:0,18,411	1/1:14,2:15:14.13:165,14,0	1/1:21,3:23:8.03:178,8,0	1/1:24,0:24:11.67:73,12,0	1/1:28,0:27:61.02:436,61,0	0/1:13,6:19:35.08:65,0,35	1/1:18,3:21:15.39:271,15,0	1/1:12,4:16:6:51,6,0	1/1:19,8:27:10.11:102,10,0	1/1:26,3:29:25.74:325,26,0	1/1:17,3:20:14.74:175,15,0	0/0:33,2:34:28.48:0,28,264	1/1:26,3:29:33.90:434,34,0	1/1:12,0:11:14.60:99,15,0	1/1:13,0:13:5.63:125,6,0	1/1:12,0:10:16.54:180,17,0	0/1:28,4:30:2.11:220,0,2	./.	1/1:22,2:23:22.48:169,22,0	0/0:13,8:21:2.40:0,2,8	1/1:26,2:28:8.80:123,9,0	1/1:16,2:17:4.67:172,5,0	1/1:19,1:20:45.03:387,45,0	1/1:26,4:29:22.30:308,22,0	1/1:10,1:11:13.68:136,14,0
chr10	25196622	.	AC	A	1077.26	PASS	AB=0.890;AC=22;AF=0.393;AN=56;BaseQRankSum=10.916;DP=718;FS=4.615;HRun=1;HaplotypeScore=252.7417;InbreedingCoeff=-0.2198;MQ=41.54;MQ0=32;MQRankSum=-6.674;QD=2.47;ReadPosRankSum=6.038;VQSLOD=-0.4929;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:32.45:0,32,344	0/1:10,3:13:62:99,0,62	0/0:33,0:7:18.06:0,18,225	0/0:25,0:10:27.97:0,28,362	0/1:13,2:14:28.43:28,0,91	0/0:29,1:27:24.33:0,24,308	0/0:29,0:28:13.80:0,14,135	0/0:47,0:44:97.78:0,98,1175	0/1:19,0:19:45.33:147,0,45	0/1:28,2:30:99:127,0,283	1/1:21,0:20:1.41:2,1,0	1/1:25,2:27:4.50:46,5,0	0/1:31,5:34:84.63:85,0,292	0/1:20,3:21:46.93:47,0,131	0/0:40,0:39:35.95:0,36,417	0/1:20,3:23:61.76:62,0,232	0/0:14,0:12:13.26:0,13,130	0/0:15,0:15:38.12:0,38,442	0/1:21,0:17:23.62:24,0,364	0/1:26,5:28:99:121,0,263	0/1:34,0:32:0:0,0,0	0/1:18,5:22:26.75:53,0,27	1/1:21,0:21:11.24:113,11,0	0/1:19,6:25:8.65:9,0,42	0/1:13,5:17:72.90:73,0,155	0/1:15,3:17:56.18:56,0,207	0/1:23,3:25:99:103,0,197	0/1:12,1:12:45.88:46,0,81
chr10	25196625	.	CACACACACACACACACAGAGAG	C	14600.08	PASS	AB=1.000;AC=40;AF=0.714;AN=56;BaseQRankSum=6.746;DP=721;FS=1.604;HRun=0;HaplotypeScore=360.2325;InbreedingCoeff=0.2219;MQ=41.87;MQ0=35;MQRankSum=-1.364;QD=24.17;ReadPosRankSum=2.591;VQSLOD=2.6853;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:46,0:46:6.65:7,0,511	1/1:12,0:12:30.08:857,30,0	0/0:30,0:6:9.03:0,9,271	0/0:22,0:9:19.31:0,19,893	1/1:14,0:13:12.40:216,12,0	0/1:32,0:28:55.46:473,0,55	0/1:28,0:27:16.58:82,0,17	0/1:50,0:46:42.41:42,0,677	1/1:22,0:22:27.09:930,27,0	0/1:31,0:31:18.82:1552,0,19	1/1:24,0:23:16.29:469,16,0	1/1:27,0:27:17.64:895,18,0	1/1:36,0:34:63.10:1372,63,0	1/1:24,0:22:18.03:293,18,0	0/0:41,0:40:31.67:0,32,979	1/1:22,0:22:51.14:1495,51,0	0/1:14,0:12:99:133,0,178	0/1:14,0:14:99:136,0,373	0/1:21,0:17:99:440,0,122	1/1:31,0:28:29.99:646,30,0	1/1:36,0:35:6.49:76,6,0	1/1:21,0:20:9.50:183,9,0	1/1:14,7:22:12.93:371,13,0	0/0:23,0:23:3.76:0,4,17	1/1:17,0:16:13.34:722,13,0	1/1:19,0:17:22.04:1220,22,0	1/1:28,0:27:45.11:1380,45,0	1/1:12,0:11:2.10:611,2,0
chr10	25196627	.	CACACACACACACACAGAGAG	C	12709.39	PASS	AB=0.978;AC=42;AF=0.750;AN=56;BaseQRankSum=7.468;DP=685;FS=3.122;HRun=0;HaplotypeScore=330.0321;InbreedingCoeff=0.2056;MQ=43.32;MQ0=34;MQRankSum=0.768;QD=21.36;ReadPosRankSum=2.568;VQSLOD=2.9725;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:45,0:45:83.39:83,0,337	1/1:10,1:11:28.90:683,29,0	0/0:27,0:5:9.03:0,9,197	0/0:21,0:8:21.07:0,21,853	1/1:10,1:12:12.40:185,12,0	1/1:26,0:25:9.68:526,10,0	0/1:25,0:24:0.78:66,0,1	0/1:51,0:45:99:186,0,404	1/1:15,6:21:27.08:754,27,0	0/1:29,3:32:32.46:1283,0,32	1/1:20,4:23:16.21:412,16,0	1/1:20,7:27:21.52:768,22,0	1/1:27,2:28:54.08:1074,54,0	1/1:20,3:21:22.13:283,22,0	0/0:42,0:41:25.64:0,26,760	1/1:19,3:22:50.18:1222,50,0	0/1:13,0:11:99:189,0,170	0/1:14,0:14:99:220,0,311	0/1:18,0:15:99:356,0,112	1/1:23,4:24:29.12:530,29,0	1/1:38,0:36:6.96:77,7,0	1/1:19,2:20:12.50:172,13,0	1/1:23,0:23:15.93:360,16,0	0/1:18,2:20:22.33:31,0,22	1/1:16,2:17:15.12:582,15,0	1/1:15,1:14:21.36:997,21,0	1/1:18,4:21:45.12:1121,45,0	1/1:13,0:11:4.28:550,4,0
chr10	25196637	.	CACACAGAGAGAGAGAG	C	2584.95	PASS	AB=0.995;AC=21;AF=0.375;AN=56;BaseQRankSum=10.476;DP=672;FS=5.025;HRun=0;HaplotypeScore=342.1008;InbreedingCoeff=-0.3213;MQ=41.57;MQ0=27;MQRankSum=-6.394;QD=5.55;ReadPosRankSum=8.459;VQSLOD=0.9871;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:11,29:40:13.29:487,13,0	0/1:11,0:12:31.10:100,0,31	0/0:10,0:1:3.01:0,3,175	0/0:20,0:7:15.02:0,15,438	0/0:15,0:15:22.24:0,22,186	0/1:31,0:27:25.67:26,0,553	0/0:27,0:26:27.07:0,27,511	0/1:45,0:39:96.38:96,0,639	1/1:23,0:23:20.60:209,21,0	0/1:34,0:34:99:328,0,360	0/1:23,0:22:80.88:139,0,81	0/1:28,0:28:38.27:228,0,38	0/1:32,0:30:99:111,0,127	0/0:21,0:19:0.98:0,1,83	0/0:40,0:39:10.43:0,10,194	0/1:24,0:24:99:231,0,128	0/1:10,0:9:28.63:29,0,213	0/0:11,0:11:21.03:0,21,575	0/1:21,0:18:42.92:43,0,296	0/1:25,0:23:34.76:35,0,51	0/0:40,0:38:14.11:0,14,81	0/1:24,0:24:4.43:4,0,77	0/1:25,0:25:4.64:107,0,5	0/0:22,0:22:5.95:0,6,25	0/1:19,0:19:67.03:67,0,146	0/1:19,0:17:99:207,0,126	0/1:21,0:20:38:183,0,38	0/1:10,0:8:99:117,0,153
chr10	25196639	.	CACAGAG	C	6838.62	PASS	AB=1.000;AC=49;AF=0.875;AN=56;BaseQRankSum=-1.112;DP=669;FS=5.363;HRun=0;HaplotypeScore=260.8554;InbreedingCoeff=0.6488;MQ=41.72;MQ0=27;MQRankSum=2.211;QD=10.82;ReadPosRankSum=-0.191;VQSLOD=3.1357;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:39,0:39:12.43:148,12,0	1/1:12,0:12:26.23:248,26,0	0/0:9,0:2:6.02:0,6,103	0/0:17,0:7:14.93:0,15,194	1/1:16,0:16:25.79:309,26,0	1/1:32,0:28:19.39:457,19,0	1/1:27,0:26:26.76:376,27,0	1/1:40,0:34:15.72:206,16,0	1/1:24,0:24:18.65:139,19,0	1/1:34,0:34:27.25:516,27,0	1/1:23,0:22:14.96:211,15,0	1/1:27,0:27:32.57:335,33,0	1/1:32,0:30:37.04:403,37,0	1/1:22,0:20:20.37:240,20,0	1/1:5,35:39:8.59:168,9,0	1/1:24,0:24:50.62:545,51,0	0/1:11,0:10:19.40:19,0,127	0/0:11,0:11:4.10:0,4,187	1/1:22,0:19:22.14:236,22,0	1/1:25,0:23:15.40:225,15,0	1/1:42,0:40:20.82:267,21,0	1/1:25,0:24:22.95:265,23,0	1/1:23,0:23:20.63:228,21,0	1/1:22,0:22:3.43:73,3,0	1/1:19,0:19:28.41:341,28,0	1/1:20,0:18:37.01:407,37,0	1/1:21,0:20:32.67:329,33,0	1/1:10,0:8:12.03:146,12,0
chr10	25196641	.	CAGAGAG	C	9490.47	PASS	AB=0.961;AC=46;AF=0.821;AN=56;BaseQRankSum=-0.782;DP=668;FS=0.000;HRun=0;HaplotypeScore=255.0650;InbreedingCoeff=0.6775;MQ=41.54;MQ0=25;MQRankSum=1.690;QD=15.41;ReadPosRankSum=1.104;VQSLOD=3.6125;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:38,0:39:12.43:207,12,0	1/1:10,1:12:23.87:363,24,0	0/0:7,0:2:6.02:0,6,164	0/0:14,0:5:9.03:0,9,233	1/1:14,1:17:29.94:526,30,0	0/1:32,1:29:10.95:241,0,11	1/1:28,0:28:26.74:189,27,0	1/1:32,1:33:18.01:312,18,0	1/1:12,12:24:20.87:238,21,0	1/1:28,2:33:44.86:770,45,0	1/1:17,4:21:14.96:301,15,0	1/1:24,0:26:24.08:460,24,0	1/1:26,5:30:35.89:585,36,0	1/1:19,0:20:20.60:401,21,0	0/1:37,0:38:13.85:103,0,14	1/1:22,0:24:47.75:824,48,0	0/0:18,0:17:14.98:0,15,259	0/0:13,0:13:23.08:0,23,373	1/1:18,1:19:17.88:362,18,0	1/1:24,0:24:23.57:396,24,0	1/1:31,0:36:20.82:432,21,0	1/1:22,1:24:23.01:444,23,0	1/1:19,1:22:20.73:354,21,0	1/1:20,0:22:5.98:124,6,0	1/1:14,1:19:32.94:557,33,0	1/1:16,1:18:32.20:549,32,0	1/1:18,1:21:32.97:527,33,0	1/1:6,3:8:14.98:227,15,0
chr10	25197536	.	AT	A	549.90	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.091;DP=593;FS=0.000;HRun=6;HaplotypeScore=99.8327;InbreedingCoeff=0.9422;MQ=82.00;MQ0=0;MQRankSum=-3.580;QD=23.91;ReadPosRankSum=3.410;VQSLOD=2.9461;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,23:23:60.11:645,60,0	0/0:10,0:10:30.10:0,30,395	0/0:19,0:19:44.09:0,44,505	0/0:14,0:15:36.11:0,36,456	0/0:35,0:35:99:0,105,1321	0/0:28,0:28:69.21:0,69,893	0/0:24,0:24:69.21:0,69,893	0/0:38,0:38:99:0,105,1333	0/0:17,0:17:48.15:0,48,619	0/0:23,0:23:63.18:0,63,788	0/0:20,0:20:57.19:0,57,750	0/0:18,0:18:48.16:0,48,632	0/0:25,0:25:69.22:0,69,907	0/0:18,0:18:51.14:0,51,642	0/0:20,0:20:57.19:0,57,750	0/0:19,0:19:57.19:0,57,750	0/0:13,0:13:33.09:0,33,419	0/0:11,0:11:30.10:0,30,393	0/0:25,0:25:75.23:0,75,973	0/0:41,0:41:99:0,120,1558	0/0:8,0:8:24.06:0,24,301	0/0:32,0:32:90.29:0,90,1184	0/0:25,0:25:72.22:0,72,930	0/0:16,0:16:45.15:0,45,592	0/0:19,0:19:54.15:0,54,683	0/0:24,0:24:69.19:0,69,889	0/0:24,0:24:69.22:0,69,904	0/0:3,0:3:9.03:0,9,118
chr10	25201069	.	C	CG	966.38	PASS	AB=0.988;AC=28;AF=0.500;AN=56;BaseQRankSum=3.808;DP=573;FS=0.725;HRun=3;HaplotypeScore=90.5482;InbreedingCoeff=-0.4671;MQ=78.92;MQ0=3;MQRankSum=-0.536;QD=2.11;ReadPosRankSum=6.873;VQSLOD=-0.7294;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:36:16.01:0,16,163	1/1:2,0:2:2.22:7,2,0	0/0:18,0:14:25.05:0,25,244	0/0:28,0:21:30.13:0,30,283	0/1:24,1:25:83.03:89,0,83	0/1:21,0:21:37.73:38,0,138	0/1:17,0:18:19:59,0,19	0/1:21,2:23:40.27:40,0,181	0/1:12,0:12:10.87:34,0,11	0/1:15,0:15:31.93:32,0,72	0/1:21,0:21:45.18:62,0,45	1/1:17,0:17:3.14:66,3,0	0/1:14,0:14:26.37:40,0,26	1/1:23,0:23:12.78:97,13,0	0/0:32,0:32:93.16:0,93,1054	0/1:23,0:23:35.46:35,0,86	0/1:20,0:20:43.21:70,0,43	0/1:21,0:21:54.91:55,0,83	0/1:22,0:22:46.50:46,0,102	0/1:27,0:27:62.73:70,0,63	0/1:16,0:16:36.62:37,0,37	0/1:27,0:27:40.90:104,0,41	0/1:19,0:19:22.05:22,0,88	0/1:29,0:29:48.10:48,0,166	0/1:14,1:15:17.08:17,0,59	0/1:24,0:24:7.45:7,0,155	0/1:14,0:14:17.16:17,0,54	1/1:10,0:10:11.98:36,12,0
chr10	25201072	.	G	GT	9170.44	PASS	AB=0.590;AC=47;AF=0.839;AN=56;BaseQRankSum=-9.400;DP=577;FS=5.888;HRun=10;HaplotypeScore=63.1688;InbreedingCoeff=0.5445;MQ=76.69;MQ0=4;MQRankSum=-1.839;QD=18.30;ReadPosRankSum=1.292;VQSLOD=5.7343;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,2:37:59.41:333,59,0	1/1:1,2:3:3.01:32,3,0	0/0:17,0:12:21.70:0,22,176	0/0:27,0:20:21.28:0,21,164	1/1:5,19:24:45.06:458,45,0	0/1:8,13:21:25.33:368,0,25	1/1:2,16:18:36.09:382,36,0	1/1:12,13:26:44.25:391,44,0	1/1:1,10:12:29.91:302,30,0	1/1:3,12:15:33.08:351,33,0	1/1:4,16:20:47.11:471,47,0	1/1:2,15:17:36.09:381,36,0	1/1:2,11:13:30.08:320,30,0	1/1:1,21:22:51.13:544,51,0	0/0:32,0:32:83.85:0,84,689	1/1:5,17:22:42.10:448,42,0	1/1:3,19:22:10.05:497,10,0	0/1:5,15:21:4.30:349,0,4	1/1:8,15:23:23.89:427,24,0	1/1:6,20:26:20.84:390,21,0	1/1:2,15:17:5.44:263,5,0	1/1:7,24:31:60.62:636,61,0	1/1:10,9:19:4.49:319,4,0	1/1:7,21:30:7.55:458,8,0	0/1:4,9:14:5.71:143,0,6	1/1:6,17:24:50.50:477,50,0	1/1:4,13:17:23.89:238,24,0	1/1:0,6:6:18.05:192,18,0
chr10	25201208	.	AT	A	402.46	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.138;DP=570;FS=6.036;HRun=1;HaplotypeScore=58.5867;InbreedingCoeff=0.8591;MQ=88.19;MQ0=0;MQRankSum=-2.088;QD=21.18;ReadPosRankSum=1.915;VQSLOD=3.6973;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,105,1678	0/0:4,0:4:9.03:0,9,143	0/0:28,0:28:81.24:0,81,1249	0/0:14,0:14:36.09:0,36,534	0/0:17,0:17:51.16:0,51,792	0/0:24,0:24:72.25:0,72,1151	0/0:17,0:17:48.15:0,48,742	0/0:34,0:34:99:0,99,1516	0/0:12,0:12:36.12:0,36,575	0/0:19,0:19:57.19:0,57,890	0/0:12,0:12:33.04:0,33,495	0/0:30,0:30:90.29:0,90,1415	0/0:25,0:25:75.26:0,75,1190	0/0:21,0:21:63.21:0,63,1007	1/1:0,19:19:56.93:497,57,0	0/0:25,0:25:69.22:0,69,1080	0/0:17,0:17:51.17:0,51,812	0/0:20,0:20:60.20:0,60,959	0/0:22,0:22:66.22:0,66,1034	0/0:20,0:20:54.18:0,54,862	0/0:24,0:24:72.23:0,72,1128	0/0:12,0:12:36.12:0,36,567	0/0:18,0:18:51.07:0,51,759	0/0:21,0:21:60.20:0,60,954	0/0:16,0:16:48.16:0,48,766	0/0:25,0:25:75.20:0,75,1169	0/0:37,0:37:99:0,111,1764	0/0:2,0:2:6.02:0,6,96
chr10	25201210	.	GA	G	403.17	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.331;DP=569;FS=4.572;HRun=1;HaplotypeScore=60.5056;InbreedingCoeff=0.8591;MQ=87.59;MQ0=0;MQRankSum=-2.149;QD=21.22;ReadPosRankSum=2.047;VQSLOD=3.8720;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,105,1678	0/0:4,0:4:9.03:0,9,144	0/0:29,0:29:84.28:0,84,1321	0/0:12,0:12:33.11:0,33,527	0/0:16,0:16:48.15:0,48,744	0/0:25,0:25:75.23:0,75,1153	0/0:16,0:16:45.14:0,45,696	0/0:31,0:31:93.29:0,93,1425	0/0:12,0:12:36.11:0,36,549	0/0:19,0:19:57.19:0,57,885	0/0:13,0:13:36.12:0,36,572	0/0:31,0:31:93.29:0,93,1441	0/0:24,0:24:72.25:0,72,1149	0/0:21,0:21:63.21:0,63,996	1/1:0,19:19:56.93:498,57,0	0/0:24,0:24:66.23:0,66,1056	0/0:17,0:17:51.16:0,51,791	0/0:20,0:20:60.20:0,60,959	0/0:21,0:21:63.21:0,63,985	0/0:20,0:20:54.18:0,54,863	0/0:24,0:24:72.23:0,72,1126	0/0:13,0:13:39.12:0,39,600	0/0:19,0:19:54.15:0,54,813	0/0:23,0:23:63.21:0,63,998	0/0:16,0:16:48.16:0,48,766	0/0:25,0:25:75.26:0,75,1199	0/0:38,0:37:99:0,110,1771	0/0:2,0:2:6.02:0,6,96
chr10	25201523	.	A	AGGAAC	16372.20	PASS	AB=0.829;AC=52;AF=0.963;AN=54;BaseQRankSum=-2.755;DP=285;FS=5.621;HRun=0;HaplotypeScore=66.5005;InbreedingCoeff=-0.0495;MQ=57.32;MQ0=0;MQRankSum=-2.913;QD=57.45;ReadPosRankSum=1.112;VQSLOD=4.8421;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,0:8:21.07:472,21,0	1/1:1,0:7:18.06:366,18,0	0/1:5,0:6:28.92:149,0,29	0/1:3,1:4:20.58:93,0,21	1/1:0,0:11:24.08:536,24,0	1/1:1,0:10:24.08:571,24,0	1/1:1,0:15:40.38:776,40,0	1/1:5,0:18:48.15:1155,48,0	1/1:0,0:11:30.10:644,30,0	1/1:1,0:11:33.11:904,33,0	1/1:0,0:6:15.05:341,15,0	1/1:1,0:11:24.07:527,24,0	1/1:1,0:9:27.09:587,27,0	1/1:0,0:8:24.05:518,24,0	1/1:0,0:15:33.07:653,33,0	1/1:1,0:11:36.12:824,36,0	1/1:1,0:4:12.04:238,12,0	./.	1/1:1,0:13:36.12:943,36,0	1/1:0,0:15:45.15:1039,45,0	1/1:1,0:7:9.02:151,9,0	1/1:0,0:17:36.12:789,36,0	1/1:1,0:16:43.66:942,44,0	1/1:2,0:9:6.01:99,6,0	1/1:0,0:13:36.12:832,36,0	1/1:1,0:14:42.14:1153,42,0	1/1:1,0:12:33.11:823,33,0	1/1:0,0:3:9.03:245,9,0
chr10	25203298	.	AAT	A	4210.55	PASS	AB=0.867;AC=41;AF=0.788;AN=52;BaseQRankSum=0.905;DP=310;FS=4.179;HRun=0;HaplotypeScore=47.0499;InbreedingCoeff=0.5144;MQ=85.18;MQ0=6;MQRankSum=4.115;QD=17.84;ReadPosRankSum=0.396;VQSLOD=4.4456;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:16,0:16:10.24:10,0,360	1/1:0,4:4:6.02:73,6,0	0/1:15,0:10:0.29:0,0,38	0/0:34,0:20:6.26:0,6,70	1/1:3,10:13:23.86:252,24,0	1/1:2,14:16:29.76:339,30,0	./.	1/1:17,21:38:66.13:751,66,0	1/1:0,4:4:12.04:146,12,0	1/1:0,8:8:23.43:252,23,0	1/1:0,7:7:18.06:218,18,0	1/1:3,3:6:1.67:66,2,0	1/1:5,4:9:9.03:109,9,0	1/1:1,3:5:8.86:87,9,0	0/0:10,0:10:21.07:0,21,339	1/1:2,2:3:6.02:73,6,0	0/0:17,0:17:42.14:0,42,660	0/0:7,0:7:15.01:0,15,190	1/1:5,5:11:17.86:174,18,0	1/1:2,5:7:15.01:166,15,0	1/1:2,0:4:5.85:50,6,0	1/1:2,1:3:3.01:36,3,0	1/1:2,2:4:6.02:73,6,0	./.	1/1:3,12:15:33.10:400,33,0	1/1:7,6:12:3.07:167,3,0	1/1:4,13:17:36.11:436,36,0	0/1:5,10:15:15.29:331,0,15
chr10	25205371	.	GGT	G	1345.07	PASS	AB=0.827;AC=31;AF=0.646;AN=48;BaseQRankSum=2.573;DP=573;FS=0.869;HRun=0;HaplotypeScore=75.3910;InbreedingCoeff=0.0199;MQ=68.06;MQ0=13;MQRankSum=1.660;QD=3.40;ReadPosRankSum=2.529;VQSLOD=1.9751;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	1/1:4,3:7:3.01:32,3,0	./.	./.	0/1:18,9:28:18.70:124,0,19	0/1:22,8:30:32.21:66,0,32	0/1:15,3:18:7.97:26,0,8	0/0:25,0:25:0:0,0,0	0/1:13,2:15:19.12:112,0,19	1/1:19,0:19:9.32:72,9,0	0/1:12,6:19:34.18:37,0,34	0/1:8,3:11:52.12:52,0,53	0/1:14,0:14:17.65:18,0,38	0/0:15,0:15:14.96:0,15,183	0/1:23,2:26:19.13:19,0,258	1/1:12,7:19:12.02:128,12,0	0/0:19,0:22:11.57:0,12,164	0/0:19,0:19:25.99:0,26,238	./.	0/1:13,4:18:31.98:55,0,32	1/1:23,6:29:2.99:32,3,0	1/1:6,4:9:9.02:96,9,0	1/1:13,4:17:5.85:46,6,0	1/1:19,12:30:15.03:160,15,0	1/1:21,9:32:21.18:189,21,0	1/1:11,6:16:9.01:96,9,0	1/1:17,6:22:8.92:96,9,0	1/1:11,0:10:5.38:40,5,0
chr10	25208168	.	TA	T	10553.81	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=0.046;DP=513;FS=16.840;HRun=9;HaplotypeScore=50.9741;InbreedingCoeff=0.9848;MQ=64.38;MQ0=0;MQRankSum=-3.511;QD=22.41;ReadPosRankSum=4.003;VQSLOD=3.8426;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,17:19:45.02:412,45,0	1/1:1,13:14:36.02:330,36,0	0/0:16,0:15:32.51:0,33,403	0/0:12,0:8:21.06:0,21,239	1/1:4,18:22:48.01:439,48,0	1/1:2,20:22:45.02:412,45,0	1/1:2,10:12:22.57:265,23,0	1/1:5,17:22:51:462,51,0	1/1:0,14:14:36.02:330,36,0	1/1:2,15:17:45.01:408,45,0	1/1:4,23:27:66.03:604,66,0	1/1:2,13:15:30.01:274,30,0	1/1:0,16:16:48.03:439,48,0	1/1:4,18:22:51.02:467,51,0	0/0:14,0:14:42.12:0,42,485	1/1:4,23:27:41.46:552,41,0	1/1:3,20:23:57.03:522,57,0	1/1:0,12:12:30.02:275,30,0	1/1:2,22:24:63.02:575,63,0	1/1:2,25:27:72.03:659,72,0	1/1:3,9:12:27:247,27,0	1/1:1,8:9:24.01:220,24,0	1/1:1,12:13:36.02:329,36,0	1/1:2,4:6:12.01:110,12,0	1/1:0,23:23:60.03:549,60,0	1/1:2,22:24:66.03:604,66,0	1/1:4,30:34:78.03:714,78,0	1/1:2,13:15:39.02:357,39,0
chr10	25208675	.	G	GA	14147.59	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-6.390;DP=601;FS=11.462;HRun=8;HaplotypeScore=62.3003;InbreedingCoeff=0.9870;MQ=72.11;MQ0=0;MQRankSum=-4.250;QD=27.58;ReadPosRankSum=1.073;VQSLOD=4.9116;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:77.39:0,77,688	1/1:0,4:4:12.03:137,12,0	0/0:18,0:18:17.93:0,18,205	0/0:16,0:16:32.92:0,33,291	1/1:6,19:25:57.07:627,57,0	1/1:3,17:21:51.15:585,51,0	1/1:1,20:21:57.17:658,57,0	1/1:10,24:34:47.74:767,48,0	1/1:0,21:21:45.13:519,45,0	1/1:5,18:23:51.13:577,51,0	1/1:3,18:21:57.17:653,57,0	1/1:1,22:23:57.17:658,57,0	1/1:0,22:22:63.19:725,63,0	1/1:3,16:19:45.13:519,45,0	0/0:26,0:26:69.03:0,69,631	1/1:1,17:18:51.15:588,51,0	1/1:2,19:21:48.14:554,48,0	1/1:1,7:8:19.35:239,19,0	1/1:4,16:21:51.15:588,51,0	1/1:4,26:30:75.19:847,75,0	1/1:2,18:20:42.12:484,42,0	1/1:4,16:20:45.09:504,45,0	1/1:0,23:23:66.19:755,66,0	1/1:1,24:25:60.18:692,60,0	1/1:0,28:28:72.21:826,72,0	1/1:5,21:26:35.71:640,36,0	1/1:5,24:29:38.73:694,39,0	1/1:1,9:10:27.08:312,27,0
chr10	25209025	.	A	AGGGCCCAGAGCT	27948	PASS	AB=0.732;AC=54;AF=0.964;AN=56;BaseQRankSum=2.717;DP=296;FS=5.004;HRun=0;HaplotypeScore=271.4922;InbreedingCoeff=-0.0515;MQ=63.48;MQ0=0;MQRankSum=-3.317;QD=94.42;ReadPosRankSum=2.939;VQSLOD=4.1484;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:20:48.16:1693,48,0	1/1:9,0:9:27.09:1002,27,0	0/1:3,2:5:14.51:441,0,15	0/1:5,0:9:70.62:437,0,71	1/1:18,0:18:32.62:1035,33,0	1/1:6,0:6:18.04:574,18,0	1/1:9,0:9:27.09:980,27,0	1/1:2,0:2:6.02:178,6,0	1/1:13,0:14:42.14:1470,42,0	1/1:15,0:15:45.15:1909,45,0	1/1:10,0:10:16.61:530,17,0	1/1:10,0:10:30.10:1100,30,0	1/1:13,0:13:39.13:1332,39,0	1/1:16,0:16:48.16:1712,48,0	1/1:12,0:12:36.12:1297,36,0	1/1:5,0:5:15.05:551,15,0	1/1:9,0:9:21.53:688,22,0	1/1:7,0:7:21.03:737,21,0	1/1:6,0:6:15.05:658,15,0	1/1:14,0:15:42.14:1354,42,0	1/1:3,0:3:6.02:224,6,0	1/1:8,0:8:21.07:751,21,0	1/1:12,0:12:27.09:901,27,0	1/1:2,0:2:2.99:24,3,0	1/1:21,0:21:63.15:2035,63,0	1/1:11,0:11:33.11:1352,33,0	1/1:22,0:22:63.18:2189,63,0	1/1:7,0:7:21.07:795,21,0
chr10	25209112	.	AC	A	1581.39	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=3.594;DP=548;FS=0.000;HRun=1;HaplotypeScore=100.2089;InbreedingCoeff=0.9688;MQ=66.39;MQ0=0;MQRankSum=0.954;QD=36.78;ReadPosRankSum=0.076;VQSLOD=3.4765;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:72.13:0,72,998	0/0:11,0:11:30.10:0,30,429	0/0:8,0:8:9.04:0,9,205	0/0:9,0:10:23.02:0,23,265	0/0:33,0:33:84.24:0,84,1186	0/0:30,0:30:84.21:0,84,1181	0/0:14,0:14:42.14:0,42,599	0/0:30,0:30:90.19:0,90,1208	0/0:21,0:21:57.19:0,57,830	1/1:0,21:21:63.18:836,63,0	1/1:0,22:22:63.21:867,63,0	0/0:17,0:17:51.15:0,51,720	0/0:18,0:18:54.18:0,54,786	0/0:22,0:22:66.14:0,66,914	0/0:20,0:20:60.20:0,60,875	0/0:16,0:16:45.13:0,45,637	0/0:22,0:22:54.15:0,54,765	0/0:17,0:17:45.15:0,45,655	0/0:18,0:18:54.11:0,54,741	0/0:21,0:21:60:0,60,783	0/0:12,0:12:36.06:0,36,482	0/0:12,0:12:33.09:0,33,461	0/0:13,0:13:39.02:0,39,534	0/0:10,0:10:30.08:0,30,418	0/0:24,0:24:69.10:0,69,918	0/0:32,1:33:57.86:0,58,1325	0/0:30,0:30:89.84:0,90,1198	0/0:15,0:15:42.14:0,42,608
chr10	25209464	.	CATATATATATAT	C	2097.17	PASS	AB=0.992;AC=30;AF=0.556;AN=54;BaseQRankSum=5.350;DP=378;FS=0.000;HRun=0;HaplotypeScore=128.5318;InbreedingCoeff=0.2410;MQ=66.92;MQ0=3;MQRankSum=-4.928;QD=7.68;ReadPosRankSum=5.205;VQSLOD=1.6549;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:7:5.83:0,6,47	./.	0/0:13,0:12:2.83:0,3,20	0/0:15,0:8:8.58:0,9,112	1/1:24,0:24:7.11:43,7,0	1/1:17,0:17:3.01:82,3,0	0/0:7,0:7:5.99:0,6,49	0/0:12,0:11:5.89:0,6,94	1/1:5,0:5:3.01:82,3,0	0/1:21,0:21:62.57:63,0,96	0/1:14,0:14:9.47:23,0,9	1/1:17,0:17:12.04:327,12,0	1/1:18,0:18:3.01:82,3,0	1/1:11,0:11:3.01:82,3,0	1/1:30,0:30:9.03:257,9,0	0/1:18,0:19:13.05:168,0,13	1/1:6,7:13:3.01:107,3,0	1/1:3,9:12:12.04:428,12,0	0/0:2,0:6:8.69:0,9,66	1/1:10,0:10:2.51:81,3,0	0/0:15,0:16:9.44:0,9,72	0/1:5,0:5:0.05:0,0,0	1/1:14,0:14:4.26:42,4,0	1/1:4,0:4:0.47:1,0,0	0/1:23,0:23:40.35:73,0,40	0/0:9,0:14:0.39:0,0,2	0/1:16,0:15:36.36:310,0,36	0/0:13,0:13:2.99:0,3,23
chr10	25209468	.	TATATATATATATATATATATATGTATGTGTATATATATATAC	T	5554.46	PASS	AB=1.000;AC=26;AF=0.481;AN=54;BaseQRankSum=5.456;DP=336;FS=6.477;HRun=0;HaplotypeScore=209.9988;InbreedingCoeff=0.2029;MQ=63.93;MQ0=5;MQRankSum=-2.716;QD=24.36;ReadPosRankSum=4.106;VQSLOD=2.6907;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:5:5.99:0,6,48	./.	0/0:11,0:9:5.67:0,6,35	0/0:17,0:7:7:0,7,190	1/1:20,0:20:6.82:371,7,0	1/1:16,0:16:3.01:215,3,0	0/0:6,0:6:5.99:0,6,49	0/0:10,0:8:9.03:0,9,377	1/1:3,0:3:3.01:215,3,0	0/1:21,0:21:99:187,0,250	0/1:12,0:12:6.83:283,0,7	1/1:17,0:17:12.04:860,12,0	1/1:16,0:16:3.89:217,4,0	1/1:9,0:9:3.01:215,3,0	1/1:1,26:27:8.90:954,9,0	0/1:17,0:17:44.46:418,0,44	0/0:12,0:12:3.01:0,3,282	0/0:12,0:12:12.04:0,12,858	0/0:6,0:6:4.80:0,5,44	0/1:11,0:11:33.06:323,0,33	0/0:13,0:13:8.97:0,9,71	0/0:5,0:5:2.47:0,2,25	1/1:12,0:12:6.02:245,6,0	1/1:3,0:3:0.47:1,0,0	0/1:19,0:19:40.21:206,0,40	1/1:9,0:9:0.07:1,0,0	0/1:16,0:15:31.91:842,0,32	0/0:9,0:9:2.99:0,3,23
chr10	25209472	.	TATATATATATATATATATGTATGTGTATATATATATAC	T	8296.55	PASS	AB=0.600;AC=39;AF=0.750;AN=52;BaseQRankSum=0.774;DP=314;FS=1.096;HRun=0;HaplotypeScore=162.8090;InbreedingCoeff=0.4870;MQ=59.32;MQ0=8;MQRankSum=2.360;QD=34.14;ReadPosRankSum=3.362;VQSLOD=3.2007;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:7:6.02:0,6,703	./.	0/0:9,0:6:2.87:0,3,15	0/0:21,0:7:5.23:0,5,171	1/1:3,16:19:11.71:671,12,0	1/1:3,13:16:3.01:290,3,0	./.	0/0:11,0:9:21.06:0,21,1096	1/1:1,2:3:3.01:290,3,0	1/1:3,17:20:29.79:625,30,0	1/1:3,9:12:6.02:421,6,0	1/1:1,18:19:12.04:1160,12,0	1/1:5,10:15:3.90:291,4,0	1/1:1,8:9:3.01:290,3,0	1/1:27,0:27:9.03:800,9,0	1/1:2,13:15:9:601,9,0	0/0:8,0:8:3.01:0,3,253	0/0:9,0:9:12.04:0,12,770	1/1:5,0:5:12.03:181,12,0	1/1:10,2:12:12.04:590,12,0	1/1:12,0:12:5.68:99,6,0	1/1:3,0:3:6.01:75,6,0	1/1:1,11:12:6.02:333,6,0	1/1:2,0:2:3:25,3,0	1/1:3,15:18:2.67:290,3,0	1/1:7,0:7:5.75:96,6,0	0/1:5,10:14:0.84:1145,0,1	1/1:2,0:2:3:25,3,0
chr10	25209474	.	TATATATATATATATATGTATGTGTATATATATATAC	T	6745.25	PASS	AB=1.000;AC=38;AF=0.731;AN=52;BaseQRankSum=3.530;DP=308;FS=1.141;HRun=0;HaplotypeScore=153.5837;InbreedingCoeff=0.5212;MQ=58.99;MQ0=9;MQRankSum=0.724;QD=28.70;ReadPosRankSum=3.426;VQSLOD=3.6191;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:6:6.02:0,6,652	./.	0/0:10,0:6:2.87:0,3,15	0/0:21,0:7:5.23:0,5,150	1/1:19,0:19:11.87:526,12,0	1/1:14,0:14:3.01:254,3,0	./.	0/0:12,0:10:21.06:0,21,956	1/1:3,0:3:3.01:254,3,0	1/1:19,0:19:25.99:383,26,0	1/1:12,0:12:6.02:348,6,0	1/1:19,0:19:12.04:1015,12,0	1/1:14,0:14:3.90:255,4,0	1/1:8,0:8:3.01:254,3,0	1/1:27,0:27:9.03:758,9,0	1/1:15,0:15:9.03:577,9,0	0/0:8,0:8:3.01:0,3,231	0/0:9,0:9:12.04:0,12,706	1/1:5,0:5:8.75:46,9,0	1/1:5,6:11:11.85:445,12,0	1/1:12,0:12:5.44:27,5,0	1/1:3,0:3:2.80:13,3,0	1/1:12,0:12:6.02:283,6,0	0/1:2,0:2:0:0,0,0	1/1:18,0:18:2.84:254,3,0	1/1:6,0:6:2.77:38,3,0	1/1:14,0:13:12.04:1015,12,0	0/1:2,0:2:0:0,0,0
chr10	25209497	.	GTA	G	419.76	PASS	AB=0.731;AC=29;AF=0.725;AN=40;BaseQRankSum=4.468;DP=279;FS=3.772;HRun=0;HaplotypeScore=88.5683;InbreedingCoeff=0.4201;MQ=60.42;MQ0=17;MQRankSum=-0.030;QD=2.19;ReadPosRankSum=2.609;VQSLOD=1.2431;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:4:1.72:5,2,0	./.	0/0:8,0:4:0.13:0,0,17	0/0:30,0:10:11.70:0,12,123	1/1:17,0:16:6.93:30,7,0	1/1:13,0:13:2.84:14,3,0	./.	0/1:12,7:15:92.25:198,0,92	1/1:2,0:2:2.84:14,3,0	1/1:18,0:17:2.84:14,3,0	1/1:9,0:9:5.68:27,6,0	1/1:18,0:18:11.36:56,11,0	1/1:10,0:10:2.84:14,3,0	1/1:8,0:8:2.84:14,3,0	1/1:26,0:26:8.52:42,9,0	1/1:14,0:14:5.68:28,6,0	0/0:14,0:14:21.07:0,21,345	0/0:14,0:14:21.07:0,21,326	./.	1/1:8,0:8:5.68:28,6,0	./.	./.	0/0:11,0:11:2.98:0,3,21	./.	1/1:15,0:15:2.84:14,3,0	./.	1/1:11,0:10:11.36:56,11,0	./.
chr10	25209510	.	C	CAT	104.25	PASS	AB=1.000;AC=14;AF=0.280;AN=50;BaseQRankSum=-3.228;DP=311;FS=1.595;HRun=0;HaplotypeScore=86.4060;InbreedingCoeff=0.4564;MQ=57.80;MQ0=16;MQRankSum=2.632;QD=2.17;ReadPosRankSum=-1.825;VQSLOD=1.8266;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:0,9:9:9.03:151,9,0	1/1:2,0:2:2.98:22,3,0	0/1:8,0:3:0.01:0,0,0	0/0:28,0:10:7.26:0,7,73	0/0:17,0:16:5.64:0,6,27	0/0:13,0:13:2.80:0,3,13	0/1:6,0:6:0:0,0,0	0/0:21,0:18:41.47:0,41,428	0/0:2,0:2:2.80:0,3,13	0/0:18,0:17:3.74:0,4,15	0/0:9,0:9:5.68:0,6,27	0/0:18,0:18:10.99:0,11,49	0/0:10,0:10:2.80:0,3,13	0/0:8,0:8:2.80:0,3,13	0/0:26,0:26:8.39:0,8,40	0/0:13,0:13:5.60:0,6,26	0/0:16,0:16:24.08:0,24,308	0/0:14,0:14:27.07:0,27,344	1/1:7,0:4:0.47:1,0,0	0/0:8,0:8:5.64:0,6,28	1/1:6,0:6:3.27:23,3,0	./.	./.	1/1:4,0:4:3.44:21,3,0	0/0:15,0:15:2.80:0,3,13	1/1:6,0:6:1.41:3,1,0	0/0:11,0:10:11.14:0,11,52	./.
chr10	25209514	.	T	TC	70.58	PASS	AB=0.759;AC=1;AF=0.019;AN=52;BaseQRankSum=-1.769;DP=328;FS=3.057;HRun=0;HaplotypeScore=85.7752;InbreedingCoeff=-0.0238;MQ=56.51;MQ0=16;MQRankSum=-3.384;QD=3.21;ReadPosRankSum=-1.338;VQSLOD=2.7902;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:11.65:0,12,91	0/0:2,0:2:3.01:0,3,41	0/0:7,0:2:3:0,3,26	0/0:22,0:8:9.41:0,9,84	0/0:19,0:18:12.49:0,12,133	0/0:14,0:14:2.50:0,2,9	0/0:7,0:7:6:0,6,63	0/1:14,7:19:99:144,0,454	0/0:2,0:2:2.50:0,2,9	0/0:19,0:18:11.53:0,12,133	0/0:10,0:10:6.02:0,6,67	0/0:18,0:18:9.98:0,10,36	0/0:12,0:12:8.50:0,9,74	0/0:9,0:9:5.48:0,5,32	0/0:26,0:26:7.49:0,7,27	0/0:13,0:13:4.99:0,5,18	0/0:17,0:17:24.08:0,24,335	0/0:14,0:14:27.09:0,27,377	0/0:10,0:7:18.06:0,18,249	0/0:10,0:10:11.51:0,12,107	0/0:7,0:7:3.95:0,4,43	0/0:5,0:5:6.01:0,6,66	./.	0/0:4,0:4:3.01:0,3,41	0/0:15,0:15:2.50:0,2,9	0/0:8,0:8:18.06:0,18,248	0/0:12,0:11:12.97:0,13,59	./.
chr10	25209533	.	TCA	T	591.91	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=1.069;DP=365;FS=12.960;HRun=0;HaplotypeScore=90.6904;InbreedingCoeff=0.7515;MQ=69.74;MQ0=4;MQRankSum=3.213;QD=26.91;ReadPosRankSum=-1.866;VQSLOD=3.5701;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:24.03:0,24,411	0/0:4,0:4:12.04:0,12,204	0/0:17,0:16:30.53:0,31,575	0/0:15,0:12:9.24:0,9,155	0/0:19,0:18:33.11:0,33,557	0/0:11,0:11:15.05:0,15,253	0/0:9,0:9:23.83:0,24,376	1/1:6,16:22:54.16:687,54,0	0/0:8,0:8:21.07:0,21,359	0/0:15,0:14:36.12:0,36,603	0/0:11,0:11:24.08:0,24,406	0/0:13,0:13:14.79:0,15,216	0/0:13,0:13:24.08:0,24,407	0/0:6,0:6:9.03:0,9,154	0/0:16,0:16:18.06:0,18,302	0/0:13,0:13:24.08:0,24,410	0/0:19,0:19:48.16:0,48,812	0/0:15,0:15:30.10:0,30,513	0/0:15,0:12:33.11:0,33,566	0/0:18,0:18:42.14:0,42,713	0/0:12,0:12:26.94:0,27,440	0/0:9,0:9:27.09:0,27,452	0/0:17,0:17:21.07:0,21,360	0/0:9,0:9:17.85:0,18,305	0/0:15,0:15:24.08:0,24,411	0/0:14,0:14:42.03:0,42,669	0/0:11,0:11:24.01:0,24,352	0/0:2,0:2:6.02:0,6,103
chr10	25210504	.	TTTAC	T	2169.74	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.539;DP=524;FS=1.985;HRun=0;HaplotypeScore=83.9144;InbreedingCoeff=0.9764;MQ=89.58;MQ0=0;MQRankSum=-4.191;QD=45.20;ReadPosRankSum=-2.417;VQSLOD=3.3186;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:30.10:0,30,799	0/0:9,0:9:24.08:0,24,648	0/0:23,0:23:10.17:0,10,1511	0/0:17,0:17:38.47:0,38,911	0/0:38,0:38:99:0,111,2963	0/0:19,0:19:57.20:0,57,1530	0/0:9,0:9:27.09:0,27,720	1/1:1,23:24:69.24:1286,69,0	0/0:15,0:15:45.14:0,45,1146	0/0:21,0:21:63.22:0,63,1691	0/0:30,0:29:90.31:0,90,2420	0/0:17,0:17:48.16:0,48,1249	0/0:27,0:27:81.28:0,81,2158	0/0:14,0:14:42.14:0,42,1122	0/0:21,0:21:57.20:0,57,1539	0/0:20,0:20:57.20:0,57,1539	1/1:1,17:18:39.13:740,39,0	1/1:1,5:6:15.05:285,15,0	0/0:17,0:17:45.13:0,45,1137	0/0:28,0:28:78.27:0,78,2085	0/0:19,0:19:57.20:0,57,1481	0/0:13,0:13:39.13:0,39,1053	0/0:19,0:19:57.20:0,57,1509	0/0:11,0:11:27.09:0,27,708	0/0:25,0:25:72.25:0,72,1924	0/0:22,0:22:66.23:0,66,1748	0/0:15,0:14:45.15:0,45,1175	0/0:15,0:15:45.15:0,45,1207
chr10	25211293	.	C	CA	1569.04	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-9.038;DP=657;FS=9.577;HRun=8;HaplotypeScore=63.3952;InbreedingCoeff=0.9979;MQ=80.65;MQ0=1;MQRankSum=-1.432;QD=24.14;ReadPosRankSum=-1.331;VQSLOD=3.5660;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:68.98:0,69,618	0/0:10,0:10:24.01:0,24,220	0/0:21,0:19:33.10:0,33,318	0/0:20,0:21:39.82:0,40,332	0/0:32,0:32:84.03:0,84,769	0/0:33,0:32:90.04:0,90,823	0/0:12,0:12:23.99:0,24,214	1/1:8,21:29:66.11:708,66,0	0/0:22,0:22:54:0,54,490	0/0:42,0:42:99:0,108,981	0/0:27,0:27:75.04:0,75,686	0/0:26,0:26:66.03:0,66,604	0/0:29,0:29:72.03:0,72,659	0/0:25,0:25:75.01:0,75,679	0/0:19,0:19:48.02:0,48,439	0/0:20,0:20:54.03:0,54,494	1/1:1,16:17:48.14:554,48,0	1/1:3,16:19:39.12:450,39,0	0/0:18,0:18:41.92:0,42,382	0/0:33,0:33:93.05:0,93,851	0/0:12,0:12:29.55:0,30,274	0/0:28,0:30:73.11:0,73,644	0/0:25,0:25:72.04:0,72,659	0/0:17,0:17:50.96:0,51,452	0/0:26,1:27:31.40:0,31,538	0/0:17,0:17:42.01:0,42,384	0/0:37,0:37:90.01:0,90,819	0/0:11,0:13:31.08:0,31,259
chr10	25211832	.	G	GC	3185.99	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-13.242;DP=609;FS=9.147;HRun=0;HaplotypeScore=54.9409;InbreedingCoeff=0.9990;MQ=76.96;MQ0=0;MQRankSum=-1.485;QD=43.64;ReadPosRankSum=-1.249;VQSLOD=3.1652;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:69.20:0,69,926	0/0:17,0:17:51.16:0,51,697	0/0:20,0:18:53.75:0,54,641	0/0:17,0:16:41.58:0,42,474	0/0:35,0:35:99:0,102,1424	0/0:18,0:18:54.18:0,54,754	0/0:17,0:17:51.17:0,51,713	1/1:0,23:23:69.22:1078,69,0	0/0:24,0:24:72.09:0,72,962	0/0:32,0:32:93.30:0,93,1280	0/0:26,0:26:75.24:0,75,1031	0/0:18,0:18:54.18:0,54,755	0/0:27,0:27:81.25:0,81,1097	0/0:21,0:21:63.21:0,63,880	0/0:21,0:21:63.20:0,63,863	0/0:26,0:26:75.25:0,75,1047	1/1:0,23:23:69.24:1101,69,0	1/1:1,26:27:72.25:1150,72,0	0/0:18,0:18:54.15:0,54,719	0/0:30,0:30:87.27:0,87,1182	0/0:11,0:11:33.07:0,33,410	0/0:19,0:19:57.16:0,57,761	0/0:22,0:22:66.18:0,66,859	0/0:10,0:10:30.10:0,30,419	0/0:15,0:15:45.14:0,45,612	0/0:23,0:23:69.22:0,69,949	0/0:33,0:33:99:0,99,1346	0/0:12,0:12:24.08:0,24,335
chr10	25212883	.	G	GA	16726.45	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-8.346;DP=619;FS=0.650;HRun=8;HaplotypeScore=53.4909;InbreedingCoeff=0.9886;MQ=76.48;MQ0=0;MQRankSum=-4.453;QD=28.89;ReadPosRankSum=1.217;VQSLOD=5.1507;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,17:20:51.15:582,51,0	1/1:1,6:7:15.04:173,15,0	0/0:10,0:10:26.75:0,27,230	0/0:13,0:13:17.81:0,18,158	1/1:6,33:40:50.13:1038,50,0	1/1:3,23:26:63.19:727,63,0	1/1:4,13:17:36.11:416,36,0	1/1:3,31:34:90.25:1028,90,0	1/1:0,24:24:69.20:796,69,0	1/1:2,30:32:90.21:1014,90,0	1/1:3,30:34:96.16:1071,96,0	1/1:0,15:15:39.12:450,39,0	1/1:4,14:18:42.09:471,42,0	1/1:6,18:24:45.13:520,45,0	0/0:17,0:17:48.02:0,48,439	1/1:3,14:17:39.12:450,39,0	1/1:2,18:20:51.15:589,51,0	1/1:2,11:14:36.40:388,36,0	1/1:2,28:30:84.25:969,84,0	1/1:2,33:35:96.24:1092,96,0	1/1:1,6:7:21.05:233,21,0	1/1:3,20:23:57.17:658,57,0	1/1:2,26:28:78.23:900,78,0	1/1:1,9:10:24.07:277,24,0	1/1:5,25:29:75.22:866,75,0	1/1:2,18:20:54.14:611,54,0	1/1:5,30:36:81.23:925,81,0	1/1:0,18:18:42.12:485,42,0
chr10	25214456	.	C	CTGTG	6106.87	PASS	AB=0.675;AC=40;AF=0.741;AN=54;BaseQRankSum=-4.645;DP=494;FS=0.000;HRun=0;HaplotypeScore=102.4140;InbreedingCoeff=0.5192;MQ=50.53;MQ0=12;MQRankSum=-0.293;QD=15.34;ReadPosRankSum=3.502;VQSLOD=4.0469;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:12:3:0,3,28	1/1:2,5:7:6.02:145,6,0	0/0:18,0:9:9.03:0,9,134	0/0:24,0:15:20.03:0,20,231	1/1:17,13:31:7.56:382,8,0	1/1:23,6:29:26.54:474,27,0	1/1:10,5:15:3.01:72,3,0	1/1:28,0:26:17.13:354,17,0	0/1:5,8:13:7.18:275,0,7	0/1:10,10:19:66.89:488,0,67	1/1:12,7:20:20.47:382,20,0	1/1:10,6:17:6.49:145,6,0	1/1:3,13:16:21.52:430,22,0	1/1:2,13:16:14.72:299,15,0	0/1:10,0:18:0:0,0,0	1/1:7,11:18:15.05:345,15,0	0/0:7,0:19:8.97:0,9,76	0/0:2,0:13:9.01:0,9,84	./.	1/1:4,11:16:6.02:130,6,0	1/1:7,4:10:8.82:158,9,0	1/1:12,1:13:14.57:221,15,0	0/1:8,5:12:0.26:157,0,0	1/1:10,14:22:3.27:74,3,0	1/1:7,10:18:14.79:286,15,0	1/1:10,14:25:25.83:510,26,0	1/1:6,11:18:23.55:418,24,0	1/1:0,10:10:15.05:362,15,0
chr10	25214472	.	G	GTGTA	4136.69	PASS	AB=1.000;AC=27;AF=0.500;AN=54;BaseQRankSum=1.394;DP=521;FS=4.590;HRun=0;HaplotypeScore=118.1311;InbreedingCoeff=-0.1658;MQ=45.05;MQ0=30;MQRankSum=-0.756;QD=10.80;ReadPosRankSum=5.333;VQSLOD=2.4833;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:13:2.62:0,3,49	0/1:6,0:6:9.96:87,0,10	0/0:36,0:7:15.02:0,15,223	0/0:34,0:14:19.51:0,20,341	0/1:29,0:28:57.49:225,0,57	0/1:25,0:25:85.02:245,0,85	0/1:14,0:14:36.66:37,0,51	1/1:9,17:24:34.39:675,34,0	0/1:14,0:14:48.33:176,0,48	0/1:15,0:14:99:317,0,114	0/1:26,0:25:4.07:218,0,4	0/1:17,0:16:31.85:109,0,32	1/1:18,0:17:19.47:293,19,0	1/1:16,0:16:11.57:198,12,0	0/0:17,0:17:2.99:0,3,24	1/1:18,0:18:0.20:247,0,0	0/0:18,0:17:14.07:0,14,150	0/0:13,0:13:14.03:0,14,128	./.	0/1:18,0:18:14.94:78,0,15	0/1:10,0:9:16.28:87,0,16	0/1:19,0:17:49.47:114,0,49	1/1:17,0:15:5.83:97,6,0	0/1:23,0:21:36.89:37,0,47	0/1:16,0:16:6.94:163,0,7	0/1:28,0:28:99:245,0,116	0/1:18,0:18:3.90:244,0,4	1/1:10,0:10:15.05:244,15,0
chr10	25214583	.	G	GA	7269.41	PASS	AC=52;AF=1.000;AN=52;BaseQRankSum=-2.317;DP=325;FS=3.252;HRun=7;HaplotypeScore=242.7209;InbreedingCoeff=-0.0042;MQ=31.67;MQ0=0;MQRankSum=0.403;QD=22.37;ReadPosRankSum=2.159;VQSLOD=1.6777;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:22:44.48:246,44,0	1/1:1,4:5:12.04:145,12,0	./.	./.	1/1:2,9:11:26.29:297,26,0	1/1:5,15:20:37.59:459,38,0	1/1:2,9:11:27:293,27,0	1/1:2,7:9:24.03:288,24,0	1/1:3,7:10:18.06:217,18,0	1/1:2,11:12:30.09:352,30,0	1/1:3,7:10:12.30:145,12,0	1/1:4,9:13:24.03:273,24,0	1/1:4,8:12:21.01:225,21,0	1/1:6,6:12:21.05:244,21,0	1/1:4,10:14:30.01:329,30,0	1/1:0,12:12:32.84:371,33,0	1/1:2,13:15:31.14:369,31,0	1/1:4,6:10:15.44:150,15,0	1/1:5,4:8:11.18:143,11,0	1/1:4,8:12:21.06:253,21,0	1/1:4,0:4:2.99:24,3,0	1/1:2,11:13:33.02:379,33,0	1/1:3,6:9:15:165,15,0	1/1:4,11:15:21.06:254,21,0	1/1:5,11:16:30.09:362,30,0	1/1:11,12:23:57.10:657,57,0	1/1:7,11:19:35.98:412,36,0	1/1:0,6:6:18.06:217,18,0
chr10	25214684	.	GA	G	1397.75	PASS	AB=0.923;AC=9;AF=0.161;AN=56;BaseQRankSum=7.745;DP=505;FS=0.907;HRun=11;HaplotypeScore=71.5109;InbreedingCoeff=0.7627;MQ=53.83;MQ0=9;MQRankSum=-3.508;QD=11.65;ReadPosRankSum=0.644;VQSLOD=3.3556;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:38:61.07:178,61,0	0/0:7,0:7:18.05:0,18,191	0/0:9,0:2:6.01:0,6,58	0/0:9,0:3:5.98:0,6,48	0/0:29,0:29:47.88:0,48,465	0/0:15,2:17:20.57:0,21,386	0/0:16,1:16:20.32:0,20,405	1/1:3,12:14:29.96:246,30,0	0/0:10,0:12:35.76:0,36,332	0/0:20,0:19:42.02:0,42,426	0/0:21,0:20:39.10:0,39,413	0/0:12,0:11:21.05:0,21,224	0/0:17,0:16:35.92:0,36,365	0/0:12,0:12:27.07:0,27,288	0/1:11,1:11:22.14:22,0,190	0/0:9,1:10:5.40:0,5,251	1/1:6,26:32:77.55:627,78,0	1/1:3,20:23:59.88:488,60,0	0/0:6,0:6:12.02:0,12,122	0/0:15,0:16:32.24:0,32,378	0/0:20,0:18:39.56:0,40,410	0/0:12,0:13:6.17:0,6,216	0/0:21,0:21:24.81:0,25,415	0/0:38,0:36:87.22:0,87,926	0/0:21,1:21:39.05:0,39,396	0/0:25,0:23:57.08:0,57,582	0/0:20,0:20:27.07:0,27,393	0/0:9,0:8:18.04:0,18,190
chr10	25215069	.	C	CGG	3966.76	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=0.961;DP=246;FS=0.000;HRun=8;HaplotypeScore=67.3401;InbreedingCoeff=0.8062;MQ=57.87;MQ0=0;MQRankSum=-3.243;QD=21.92;ReadPosRankSum=-3.133;VQSLOD=1.7527;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,0:9:18.81:164,19,0	1/1:2,1:3:5.98:67,6,0	0/0:12,0:11:27.38:0,27,258	0/0:12,0:10:19.28:0,19,202	1/1:7,2:9:9.01:120,9,0	1/1:1,2:4:8.52:104,9,0	1/1:3,2:5:15.04:215,15,0	0/0:10,0:10:6:0,6,65	1/1:2,4:6:14.91:154,15,0	1/1:6,5:12:24.42:299,24,0	1/1:4,3:7:9.01:119,9,0	1/1:6,3:9:15.07:188,15,0	1/1:6,3:9:23.67:337,24,0	1/1:7,1:9:11.48:115,11,0	1/1:8,2:11:18.48:235,18,0	1/1:5,1:6:11.48:115,11,0	0/0:18,0:17:33:0,33,351	0/0:13,0:13:30.06:0,30,334	1/1:4,3:7:14.53:177,15,0	1/1:6,2:8:9.02:121,9,0	1/1:8,2:11:11.91:135,12,0	1/1:3,6:9:21.06:311,21,0	1/1:6,4:12:26.06:333,26,0	1/1:4,4:8:11.97:160,12,0	1/1:7,2:9:12.03:169,12,0	1/1:1,6:6:6.02:93,6,0	1/1:2,3:5:9.02:121,9,0	1/1:3,1:4:10.57:116,11,0
chr10	25215111	.	AT	A	1275.57	PASS	AB=0.972;AC=38;AF=0.679;AN=56;BaseQRankSum=-2.127;DP=234;FS=5.723;HRun=1;HaplotypeScore=59.1021;InbreedingCoeff=0.0625;MQ=56.87;MQ0=1;MQRankSum=1.490;QD=6.07;ReadPosRankSum=7.070;VQSLOD=0.6757;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:4:11.98:0,12,115	0/1:5,0:5:13.93:26,0,14	0/0:8,0:6:11.99:0,12,123	0/0:12,0:8:13.84:0,14,139	1/1:11,0:11:17.27:73,17,0	0/1:12,0:12:16.09:51,0,16	1/1:7,1:8:15.15:102,15,0	1/1:12,0:12:22.69:96,23,0	0/1:4,1:5:13.59:23,0,14	1/1:3,0:3:6.57:25,7,0	0/1:9,0:9:21.53:22,0,34	1/1:7,1:8:21.64:140,22,0	0/1:9,0:9:28.45:56,0,28	0/1:9,1:10:0.53:89,0,1	1/1:6,0:6:9.59:39,10,0	1/1:4,2:6:13.11:102,13,0	0/1:10,0:10:9.24:35,0,9	0/1:6,0:6:18.58:19,0,23	0/1:7,0:6:2.16:2,0,55	0/1:10,1:11:5.26:68,0,5	1/1:8,0:8:17.81:72,18,0	0/1:8,0:8:4.40:49,0,4	0/1:11,0:11:15.36:38,0,15	1/1:3,0:3:7.65:33,8,0	1/1:13,0:13:3.96:55,4,0	1/1:8,0:8:15.09:60,15,0	1/1:9,1:10:18.85:68,19,0	1/1:9,2:11:22.48:104,22,0
chr10	25215112	.	TG	T	4920.84	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-3.172;DP=240;FS=12.742;HRun=6;HaplotypeScore=50.0235;InbreedingCoeff=0.8079;MQ=56.87;MQ0=1;MQRankSum=1.987;QD=22.78;ReadPosRankSum=3.325;VQSLOD=3.2934;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:1,0:4:11.62:0,12,69	1/1:2,3:5:8.76:96,9,0	0/0:8,0:6:11.99:0,12,129	0/0:12,0:8:13.02:0,13,149	1/1:1,10:11:27.04:278,27,0	1/1:3,10:13:33.07:347,33,0	1/1:3,5:8:21.01:213,21,0	1/1:1,11:12:33.07:345,33,0	1/1:3,3:6:9:96,9,0	1/1:0,3:3:9.02:97,9,0	1/1:3,6:9:12.03:129,12,0	1/1:2,7:9:24.05:251,24,0	1/1:3,7:10:18.04:191,18,0	1/1:2,8:10:21.05:222,21,0	1/1:1,6:7:12.03:129,12,0	1/1:2,4:6:15.03:154,15,0	1/1:2,8:10:15.04:161,15,0	1/1:1,5:6:11.98:129,12,0	1/1:2,5:6:6.01:64,6,0	1/1:3,8:11:21.04:219,21,0	1/1:0,8:8:21.05:226,21,0	1/1:1,7:8:21.05:225,21,0	1/1:2,9:11:21.05:226,21,0	1/1:1,3:4:9.02:97,9,0	1/1:0,13:13:24.06:254,24,0	1/1:0,8:8:21.05:226,21,0	1/1:1,9:10:24.04:257,24,0	1/1:2,9:11:27.07:289,27,0
chr10	25216801	.	T	TA	521.07	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-3.216;DP=488;FS=8.424;HRun=7;HaplotypeScore=45.4608;InbreedingCoeff=0.9675;MQ=77.95;MQ0=0;MQRankSum=-1.836;QD=24.81;ReadPosRankSum=1.541;VQSLOD=3.6567;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,20:21:51.16:616,51,0	0/0:10,0:10:30.05:0,30,289	0/0:16,0:14:27.02:0,27,260	0/0:12,0:12:17.48:0,17,156	0/0:25,0:25:66.08:0,66,631	0/0:24,0:24:69.09:0,69,656	0/0:14,0:14:39.06:0,39,376	0/0:30,0:30:84.11:0,84,802	0/0:20,0:20:54.08:0,54,521	0/0:15,0:15:42.06:0,42,406	0/0:25,0:25:72.09:0,72,686	0/0:16,0:16:45.07:0,45,435	0/0:12,0:12:36.06:0,36,348	0/0:19,0:19:54.97:0,55,524	0/0:18,0:18:54.08:0,54,516	0/0:11,0:11:30.05:0,30,290	0/0:15,0:15:45.06:0,45,428	0/0:9,0:9:21.03:0,21,203	0/0:17,0:17:45.07:0,45,434	0/0:30,0:30:75.09:0,75,714	0/0:5,0:5:15.02:0,15,145	0/0:14,0:14:42.07:0,42,406	0/0:17,0:17:45.07:0,45,434	0/0:13,0:13:39.05:0,39,370	0/0:30,0:31:77.13:0,77,724	0/0:18,0:18:51.06:0,51,483	0/0:23,0:23:66.11:0,66,637	0/0:8,0:8:23.86:0,24,202
chr10	25217008	.	TCCCTTCAG	T	594.09	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.029;DP=535;FS=1.307;HRun=0;HaplotypeScore=173.5011;InbreedingCoeff=0.9738;MQ=92.20;MQ0=0;MQRankSum=-3.985;QD=54.01;ReadPosRankSum=-1.075;VQSLOD=3.5678;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,8:11:24.08:687,24,0	0/0:5,0:5:15.05:0,15,671	0/0:25,0:25:63.17:0,63,2459	0/0:23,0:23:66.22:0,66,2492	0/0:20,0:20:60.21:0,60,2531	0/0:32,0:32:90.31:0,90,3899	0/0:10,0:10:30.09:0,30,1229	0/0:24,0:24:69.23:0,69,2820	0/0:17,0:17:48.16:0,48,2086	0/0:24,0:24:69.23:0,69,2854	0/0:25,0:25:69.23:0,69,2977	0/0:20,0:20:60.19:0,60,2574	0/0:17,0:17:51.18:0,51,2281	0/0:18,0:18:54.17:0,54,2303	0/0:22,0:22:66.21:0,66,2783	0/0:25,0:25:75.24:0,75,3138	0/0:13,0:13:39.13:0,39,1659	0/0:6,0:6:18.06:0,18,805	0/0:25,0:25:69.24:0,69,2932	0/0:30,0:30:87.30:0,87,3744	0/0:13,0:13:39.13:0,39,1689	0/0:25,0:25:72.25:0,72,3075	0/0:11,0:11:33.11:0,33,1458	0/0:19,0:19:48.16:0,48,2073	0/0:13,0:13:39.13:0,39,1744	0/0:14,0:14:42.14:0,42,1824	0/0:31,0:31:93.32:0,93,4117	0/0:17,0:17:51.17:0,51,2188
chr10	25217033	.	T	TG	84.33	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.812;DP=587;FS=1.352;HRun=4;HaplotypeScore=89.1859;InbreedingCoeff=0.9931;MQ=79.55;MQ0=0;MQRankSum=-3.600;QD=10.54;ReadPosRankSum=0.841;VQSLOD=1.0883;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,4:8:20.85:176,21,0	0/0:8,0:8:24.07:0,24,272	0/0:29,0:25:58.91:0,59,656	0/0:23,0:22:59:0,59,568	0/0:19,0:19:54.14:0,54,602	0/0:28,0:28:75.19:0,75,832	0/0:15,0:15:42.09:0,42,459	0/0:27,0:27:72.19:0,72,796	0/0:16,0:16:45.05:0,45,485	0/0:26,0:26:75.20:0,75,837	0/0:27,0:27:78.20:0,78,872	0/0:23,0:23:63.16:0,63,703	0/0:19,0:19:51.12:0,51,560	0/0:25,0:25:72.19:0,72,801	0/0:25,0:25:69.18:0,69,772	0/0:25,0:25:75.17:0,75,829	0/0:19,0:19:54.13:0,54,600	0/0:12,0:11:30.03:0,30,325	0/0:20,0:20:54.12:0,54,583	0/0:27,0:27:78.20:0,78,867	0/0:17,0:17:48.12:0,48,533	0/0:27,0:27:78.21:0,78,874	0/0:16,0:16:48.13:0,48,536	0/0:20,0:20:60.10:0,60,638	0/0:20,0:20:60.17:0,60,680	0/0:17,0:17:42.08:0,42,463	0/0:34,0:34:99:0,99,1122	0/0:15,0:15:45.13:0,45,509
chr10	25217292	.	TA	T	955.17	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=8.066;DP=648;FS=0.000;HRun=2;HaplotypeScore=62.7832;InbreedingCoeff=0.9988;MQ=82.89;MQ0=0;MQRankSum=-4.184;QD=28.09;ReadPosRankSum=1.942;VQSLOD=3.2876;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,33:34:81.26:1050,81,0	0/0:14,0:14:42.11:0,42,598	0/0:24,0:24:55.47:0,55,763	0/0:21,0:21:50.56:0,51,671	0/0:22,0:22:66.22:0,66,976	0/0:32,0:32:93.29:0,93,1337	0/0:21,0:21:60.17:0,60,832	0/0:30,0:30:84.26:0,84,1192	0/0:24,0:24:72.20:0,72,1007	0/0:26,0:26:78.25:0,78,1122	0/0:18,0:18:54.15:0,54,743	0/0:9,0:9:27.06:0,27,360	0/0:26,0:26:78.25:0,78,1132	0/0:22,0:22:60.17:0,60,829	0/0:29,0:29:87.25:0,87,1215	0/0:27,0:27:81.25:0,81,1160	0/0:24,0:24:72.18:0,72,1018	0/0:13,0:13:39.10:0,39,553	0/0:21,0:21:60.19:0,60,856	0/0:35,0:35:99:0,105,1495	0/0:28,0:28:81.24:0,81,1157	0/0:23,0:23:69.22:0,69,1003	0/0:23,0:23:66.21:0,66,957	0/0:20,0:20:60.19:0,60,869	0/0:17,0:17:48.16:0,48,709	0/0:13,0:13:39.13:0,39,576	0/0:35,0:34:99:0,105,1485	0/0:17,0:17:48.16:0,48,710
chr10	25219068	.	T	TG	770.63	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.781;DP=552;FS=1.586;HRun=8;HaplotypeScore=67.8421;InbreedingCoeff=0.9878;MQ=79.73;MQ0=0;MQRankSum=-2.041;QD=30.83;ReadPosRankSum=1.016;VQSLOD=3.3183;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,117,1071	0/0:11,0:11:27.01:0,27,247	0/0:20,0:19:40.35:0,40,360	0/0:12,0:12:23.89:0,24,196	0/0:27,0:27:34.60:0,35,569	0/0:17,0:18:50.06:0,50,445	0/0:17,0:17:45.02:0,45,412	0/0:26,0:25:53.96:0,54,478	0/0:18,0:18:51.02:0,51,467	0/0:22,0:22:54.02:0,54,492	0/0:22,0:22:63.03:0,63,576	0/0:13,0:13:36.02:0,36,330	0/0:21,0:21:59.99:0,60,541	0/0:14,0:14:29.95:0,30,266	1/1:0,25:25:75.22:866,75,0	0/0:19,0:19:51:0,51,461	0/0:32,0:32:93.05:0,93,851	0/0:9,0:9:24.01:0,24,220	0/0:22,0:22:42.01:0,42,384	0/0:20,0:20:51:0,51,462	0/0:12,0:12:26.99:0,27,242	0/0:20,0:20:42.01:0,42,384	0/0:21,1:22:21.11:0,21,409	0/0:22,0:22:57.03:0,57,522	0/0:21,0:21:60.03:0,60,549	0/0:21,0:21:51.02:0,51,466	0/0:13,0:13:39.02:0,39,357	0/0:9,0:9:27.01:0,27,247
chr10	25219761	.	CAT	C	2857.64	PASS	AC=38;AF=0.760;AN=50;BaseQRankSum=-0.374;DP=224;FS=10.983;HRun=0;HaplotypeScore=33.2872;InbreedingCoeff=0.6693;MQ=83.84;MQ0=2;MQRankSum=2.743;QD=24.22;ReadPosRankSum=2.962;VQSLOD=2.9522;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,8:11:18.06:234,18,0	1/1:0,2:2:6.02:78,6,0	0/0:15,0:11:15.96:0,16,149	0/0:19,0:14:6.13:0,6,98	1/1:2,8:10:21.03:254,21,0	1/1:1,8:9:21.07:273,21,0	1/1:0,1:1:3.01:39,3,0	0/0:30,0:30:72.25:0,72,1207	1/1:0,5:5:15.05:195,15,0	1/1:2,6:8:18.06:234,18,0	1/1:1,2:3:3.01:39,3,0	1/1:1,3:4:9.03:117,9,0	1/1:0,3:3:6.02:78,6,0	1/1:0,3:3:6.02:78,6,0	0/0:1,0:1:3.01:0,3,51	1/1:0,3:2:3.01:39,3,0	0/0:4,0:26:53.99:0,54,485	0/0:2,0:11:12.01:0,12,107	1/1:2,13:15:39.13:506,39,0	./.	1/1:2,3:5:6.02:78,6,0	./.	1/1:3,1:4:3.01:39,3,0	./.	1/1:1,7:8:18.06:234,18,0	1/1:1,2:3:6.02:78,6,0	1/1:4,3:7:6.02:78,6,0	1/1:0,14:14:27.09:351,27,0
chr10	25221034	.	G	GTTGAC	41273.35	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-8.809;DP=652;FS=3.275;HRun=0;HaplotypeScore=107.4672;InbreedingCoeff=0.9928;MQ=57.43;MQ0=0;MQRankSum=-6.401;QD=73.05;ReadPosRankSum=6.687;VQSLOD=6.1177;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,43:51:99:3539,120,0	1/1:2,6:10:21.03:600,21,0	0/0:28,0:27:78.25:0,78,1532	0/0:24,0:24:63.20:0,63,1274	1/1:0,19:21:57.20:1743,57,0	1/1:4,27:32:87.30:2729,87,0	1/1:2,13:15:39.09:1144,39,0	0/0:35,0:35:99:0,102,2118	1/1:5,17:27:57.16:1632,57,0	1/1:2,17:21:63.19:1860,63,0	1/1:2,14:17:42.14:1259,42,0	1/1:10,16:28:66.22:1938,66,0	1/1:6,22:28:63.22:1976,63,0	1/1:4,17:22:54.18:1572,54,0	1/1:6,17:25:63.11:1921,63,0	1/1:4,15:24:57.16:1606,57,0	1/1:4,17:21:57.20:1792,57,0	1/1:4,12:20:41.88:1247,42,0	1/1:5,16:25:72.19:2006,72,0	1/1:3,17:22:54.10:1477,54,0	1/1:2,19:24:57.15:1702,57,0	1/1:4,14:19:48.16:1438,48,0	1/1:5,12:18:39.09:1179,39,0	1/1:1,16:18:41.83:1234,42,0	1/1:5,12:18:42.14:1188,42,0	1/1:5,17:25:69.21:1978,69,0	1/1:2,19:22:63.22:2027,63,0	1/1:4,6:10:15.05:484,15,0
chr10	25224723	.	AG	A	827.96	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.937;DP=556;FS=0.821;HRun=1;HaplotypeScore=50.1753;InbreedingCoeff=0.9949;MQ=75.39;MQ0=0;MQRankSum=-1.169;QD=34.50;ReadPosRankSum=0.358;VQSLOD=3.2115;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:27.09:0,27,431	0/0:10,0:10:30.10:0,30,479	0/0:12,0:12:36.11:0,36,518	0/0:13,0:13:39.12:0,39,585	0/0:23,0:23:69.24:0,69,1100	0/0:27,0:27:78.24:0,78,1218	0/0:9,0:9:27.08:0,27,402	0/0:32,0:32:96.31:0,96,1474	0/0:19,0:19:57.19:0,57,904	0/0:29,0:29:87.29:0,87,1371	0/0:28,0:28:84.29:0,84,1341	0/0:17,0:17:51.17:0,51,815	0/0:23,0:23:69.22:0,69,1079	0/0:27,0:27:81.26:0,81,1272	1/1:0,24:24:66.22:923,66,0	0/0:15,0:15:45.15:0,45,719	0/0:17,0:17:48.16:0,48,739	0/0:14,0:14:33.08:0,33,497	0/0:15,0:15:45.12:0,45,653	0/0:33,0:33:99:0,99,1559	0/0:9,0:9:27.09:0,27,432	0/0:17,0:17:51.12:0,51,786	0/0:21,0:21:63.20:0,63,984	0/0:9,0:9:27.09:0,27,432	0/0:21,0:21:63.21:0,63,1007	0/0:31,0:31:93.30:0,93,1444	0/0:38,0:38:99:0,111,1770	0/0:14,0:14:42.14:0,42,671
chr10	25226560	.	AATC	A	1284.51	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.373;DP=653;FS=6.097;HRun=0;HaplotypeScore=89.0723;InbreedingCoeff=0.9986;MQ=91.72;MQ0=0;MQRankSum=-4.792;QD=38.92;ReadPosRankSum=2.012;VQSLOD=4.5318;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:96.33:0,96,2201	0/0:9,0:9:27.09:0,27,639	0/0:23,0:23:68.98:0,69,1274	0/0:30,0:31:78.87:0,79,1766	0/0:36,0:36:99:0,108,2532	0/0:28,0:28:81.28:0,81,1894	0/0:15,0:15:42.14:0,42,991	0/0:38,0:37:99:0,114,2604	0/0:18,0:18:51.17:0,51,1201	0/0:42,0:42:99:0,126,2932	0/0:29,0:29:84.29:0,84,1942	0/0:18,0:18:54.19:0,54,1276	0/0:21,0:21:63.22:0,63,1487	0/0:17,0:17:51.16:0,51,1158	0/0:26,0:26:78.24:0,78,1750	0/0:15,0:15:45.14:0,45,998	1/1:0,22:22:54.18:930,54,0	1/1:0,11:11:27.09:476,27,0	0/0:18,0:18:51.18:0,51,1187	0/0:26,0:26:78.27:0,78,1821	0/0:11,0:11:33.11:0,33,779	0/0:13,0:13:39.12:0,39,833	0/0:23,0:23:69.22:0,69,1570	0/0:18,0:18:54.14:0,54,1149	0/0:28,0:28:84.29:0,84,1902	0/0:37,0:37:99:0,111,2539	0/0:36,0:36:99:0,108,2412	0/0:12,0:12:32.91:0,33,754
chr10	25227822	.	AT	A	477.99	PASS	AC=8;AF=0.148;AN=54;BaseQRankSum=0.548;DP=295;FS=16.777;HRun=10;HaplotypeScore=37.9323;InbreedingCoeff=0.7135;MQ=57.58;MQ0=35;MQRankSum=-1.030;QD=9.96;ReadPosRankSum=1.968;VQSLOD=0.6957;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,8:10:19.23:155,19,0	./.	0/0:24,0:7:11.78:0,12,96	0/0:20,0:6:5.88:0,6,44	0/0:13,0:13:35.76:0,36,369	0/0:8,0:7:19.25:0,19,187	0/0:4,0:2:5.95:0,6,50	0/0:31,0:29:69.02:0,69,743	0/0:4,0:2:3.01:0,3,33	0/0:18,0:18:51.12:0,51,550	0/0:6,0:6:15.03:0,15,158	0/0:4,0:3:9.02:0,9,99	0/0:9,0:9:27.07:0,27,297	0/0:5,0:5:15.04:0,15,165	1/1:2,1:3:3:26,3,0	0/0:4,0:2:3.01:0,3,33	1/1:8,12:17:29.99:260,30,0	1/1:6,8:10:20.99:182,21,0	0/0:16,0:13:33.09:0,33,363	0/0:9,0:9:18.48:0,18,180	0/0:3,0:2:6.02:0,6,66	0/0:3,0:3:6.02:0,6,66	0/0:6,0:6:11.97:0,12,116	0/0:9,0:7:11.02:0,11,92	0/0:9,0:9:18.05:0,18,198	0/0:15,0:14:29.95:0,30,327	0/0:11,0:10:30.08:0,30,326	0/0:14,0:10:21:0,21,217
chr10	25227833	.	A	AT	2757.47	PASS	AB=0.579;AC=39;AF=0.722;AN=54;BaseQRankSum=-6.755;DP=279;FS=13.874;HRun=10;HaplotypeScore=26.3193;InbreedingCoeff=0.6005;MQ=46.29;MQ0=53;MQRankSum=2.871;QD=17.02;ReadPosRankSum=1.940;VQSLOD=2.2917;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:10:16.03:0,16,76	./.	0/0:18,0:4:6:0,6,52	0/0:16,0:3:2.84:0,3,14	1/1:1,15:14:36.09:391,36,0	1/1:5,5:7:18.02:185,18,0	1/1:4,1:2:5.98:53,6,0	0/0:31,0:27:49.50:0,49,414	1/1:2,1:1:3.01:33,3,0	1/1:8,8:15:1.02:231,1,0	1/1:3,4:7:9.02:100,9,0	1/1:5,0:3:3.01:33,3,0	1/1:2,8:10:27.02:283,27,0	1/1:2,3:5:9.02:100,9,0	0/0:2,0:2:6:0,6,51	1/1:2,1:1:3.01:33,3,0	0/0:23,0:14:32.98:0,33,282	0/0:15,0:10:26.99:0,27,229	1/1:6,8:11:21.06:232,21,0	1/1:3,3:6:9.02:97,9,0	1/1:1,2:2:6.02:66,6,0	1/1:1,1:2:3.01:33,3,0	1/1:1,4:5:9.02:99,9,0	1/1:4,0:2:2.16:23,2,0	0/1:3,8:10:8.06:133,0,8	1/1:3,8:10:26.66:276,27,0	1/1:4,10:12:30.08:330,30,0	1/1:4,8:7:18.05:199,18,0
chr10	25236413	.	C	CG	2125.30	PASS	AB=0.948;AC=47;AF=0.839;AN=56;BaseQRankSum=-1.363;DP=462;FS=19.645;HRun=2;HaplotypeScore=69.0695;InbreedingCoeff=0.5348;MQ=36.80;MQ0=55;MQRankSum=3.416;QD=6.52;ReadPosRankSum=1.386;VQSLOD=-0.6133;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:25:27.14:123,27,0	0/1:8,1:9:32.49:36,0,32	0/0:59,0:5:12:0,12,122	0/0:57,0:8:17.92:0,18,182	0/1:16,1:13:3.05:55,0,3	1/1:10,0:8:9.93:55,10,0	1/1:13,1:13:17.23:96,17,0	0/0:20,0:7:18.06:0,18,219	1/1:13,0:13:12.61:69,13,0	1/1:12,0:9:21.77:136,22,0	1/1:15,1:16:19.16:100,19,0	1/1:9,0:8:8.55:52,9,0	1/1:16,0:15:23.04:112,23,0	1/1:6,1:6:3.60:29,4,0	0/1:11,0:10:1.09:13,0,1	1/1:9,0:8:6.91:41,7,0	1/1:11,1:12:21.94:132,22,0	1/1:9,1:7:9.65:71,10,0	1/1:5,0:4:7.60:36,8,0	1/1:13,0:12:6.78:77,7,0	1/1:9,0:5:11.20:57,11,0	1/1:13,0:12:14.51:103,15,0	1/1:9,1:10:21.55:152,22,0	1/1:19,0:15:14.64:78,15,0	1/1:20,1:21:39.27:224,39,0	1/1:17,0:14:33.84:179,34,0	1/1:15,2:17:26.11:196,26,0	1/1:9,0:7:15.47:57,15,0
chr10	25237051	.	C	CATTA	20909.56	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-8.285;DP=382;FS=3.190;HRun=0;HaplotypeScore=49.4319;InbreedingCoeff=0.8833;MQ=67.41;MQ0=2;MQRankSum=-3.695;QD=62.42;ReadPosRankSum=4.574;VQSLOD=6.0499;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,15:15:42.01:931,42,0	1/1:1,4:5:12.04:317,12,0	0/0:6,0:6:12.04:0,12,213	0/0:8,0:8:14.82:0,15,138	1/1:1,18:19:48.12:1207,48,0	1/1:2,18:20:57.20:1463,57,0	1/1:0,2:3:6.02:158,6,0	0/0:33,0:33:81.27:0,81,1455	1/1:0,8:8:21.07:554,21,0	1/1:3,20:23:69.24:1700,69,0	1/1:1,14:15:38.99:783,39,0	1/1:0,13:14:30.10:791,30,0	1/1:1,12:12:33.11:870,33,0	1/1:2,5:7:12:257,12,0	1/1:1,11:12:30.06:732,30,0	1/1:2,13:14:33.11:871,33,0	1/1:1,8:9:18.06:475,18,0	1/1:0,6:7:15.05:396,15,0	1/1:1,14:16:45.14:1081,45,0	1/1:7,26:33:72.25:1899,72,0	1/1:0,4:4:12.04:317,12,0	1/1:3,6:9:15.01:336,15,0	1/1:0,11:10:27.05:653,27,0	1/1:0,3:3:9.03:238,9,0	1/1:0,13:13:33.07:811,33,0	1/1:2,10:12:30.10:753,30,0	1/1:4,18:22:60.20:1500,60,0	1/1:3,22:25:72.72:1818,73,0
chr10	25243337	.	T	TTC	4185.74	PASS	AC=54;AF=0.964;AN=56;BaseQRankSum=1.688;DP=300;FS=5.911;HRun=0;HaplotypeScore=361.8528;InbreedingCoeff=0.3483;MQ=40.67;MQ0=0;MQRankSum=-1.445;QD=14.09;ReadPosRankSum=1.578;VQSLOD=2.7530;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:14:21:182,21,0	1/1:10,0:10:18:178,18,0	1/1:4,0:4:2.37:8,2,0	0/0:3,0:3:2.83:0,3,24	1/1:13,1:14:15.95:137,16,0	1/1:9,0:9:9:78,9,0	1/1:7,0:7:14.37:114,14,0	1/1:13,0:12:20.62:165,21,0	1/1:8,0:8:13.56:118,14,0	1/1:21,1:22:35.96:342,36,0	1/1:22,1:23:39.44:332,39,0	1/1:9,1:10:12.01:109,12,0	1/1:7,0:7:12.02:130,12,0	1/1:12,0:12:14.93:132,15,0	1/1:6,1:7:14.93:121,15,0	1/1:8,1:9:9:78,9,0	1/1:3,0:3:5.94:43,6,0	1/1:5,0:5:6.48:56,6,0	1/1:8,0:8:12:107,12,0	1/1:20,0:20:33.02:335,33,0	1/1:9,0:9:17.98:188,18,0	1/1:20,0:20:39.47:344,39,0	1/1:7,0:7:14.99:130,15,0	1/1:8,0:8:12:106,12,0	1/1:15,1:16:26.98:250,27,0	1/1:10,0:10:6.02:91,6,0	1/1:16,1:17:31.57:290,32,0	1/1:5,0:4:3:25,3,0
chr10	25245198	.	AATCACAGG	A	22148.61	PASS	AC=40;AF=0.741;AN=54;BaseQRankSum=15.728;DP=673;FS=17.148;HRun=0;HaplotypeScore=182.8025;InbreedingCoeff=0.9805;MQ=54.39;MQ0=4;MQRankSum=-12.020;QD=45.29;ReadPosRankSum=4.805;VQSLOD=2.8955;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,132,4737	1/1:3,6:9:9.03:247,9,0	0/0:23,0:18:39.05:0,39,785	0/0:25,0:25:66.03:0,66,1669	1/1:2,17:19:39.09:843,39,0	1/1:3,17:20:33.07:837,33,0	1/1:7,20:27:30.10:724,30,0	0/0:23,0:22:69.24:0,69,2438	1/1:6,25:31:36.12:973,36,0	1/1:4,26:31:81.26:2040,81,0	1/1:1,29:30:69.06:1482,69,0	1/1:1,22:23:54.18:1468,54,0	1/1:3,21:24:45.15:1236,45,0	1/1:3,24:27:33.11:886,33,0	0/0:15,0:15:45.15:0,45,1579	1/1:2,27:29:69.24:1873,69,0	0/0:30,0:30:87.28:0,87,3240	0/0:23,0:23:69.24:0,69,2693	1/1:9,18:24:54.15:1107,54,0	1/1:2,28:30:81.18:1676,81,0	1/1:5,19:24:12.04:281,12,0	1/1:5,19:24:42.10:989,42,0	1/1:1,26:27:56.94:1320,57,0	1/1:3,16:19:14.99:300,15,0	1/1:2,13:15:30.10:817,30,0	1/1:5,30:35:89.84:2082,90,0	1/1:2,16:18:36.12:966,36,0	./.
chr10	25246768	.	TC	T	11441.06	PASS	AB=1.000;AC=53;AF=0.946;AN=56;BaseQRankSum=4.362;DP=493;FS=18.115;HRun=1;HaplotypeScore=315.8905;InbreedingCoeff=0.3840;MQ=35.23;MQ0=0;MQRankSum=-0.640;QD=23.64;ReadPosRankSum=4.957;VQSLOD=0.8071;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,15:16:35.94:309,36,0	1/1:0,9:8:24.02:222,24,0	0/0:9,0:7:1.63:0,2,78	0/1:14,0:12:6.55:147,0,7	1/1:1,25:25:51.88:470,52,0	1/1:1,15:15:34.59:355,35,0	1/1:0,14:14:42.02:373,42,0	1/1:4,17:20:55.60:601,56,0	1/1:0,19:19:57.05:528,57,0	1/1:1,26:26:74.78:782,75,0	1/1:2,29:30:86.05:705,86,0	1/1:1,17:18:48.53:460,49,0	1/1:2,18:20:55.23:484,55,0	1/1:1,16:17:46.36:415,46,0	1/1:2,26:28:76.36:681,76,0	1/1:1,22:22:60.46:542,60,0	1/1:0,8:8:24:213,24,0	1/1:3,9:12:32.50:319,33,0	1/1:1,7:7:21.05:234,21,0	1/1:2,29:30:75.90:699,76,0	1/1:1,4:5:14.90:119,15,0	1/1:0,15:14:38.98:338,39,0	1/1:0,23:19:48.88:417,49,0	1/1:1,11:12:20.71:150,21,0	1/1:0,12:12:36:318,36,0	1/1:1,17:16:44.75:479,45,0	1/1:0,39:39:93.29:1051,93,0	1/1:1,1:2:1.98:28,2,0
chr10	25246791	.	TG	T	8013.78	PASS	AC=52;AF=1.000;AN=52;BaseQRankSum=0.694;DP=527;FS=11.708;HRun=2;HaplotypeScore=361.3956;InbreedingCoeff=-0.0168;MQ=30.80;MQ0=0;MQRankSum=-0.377;QD=15.24;ReadPosRankSum=5.625;VQSLOD=2.0738;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:12,0:12:8.76:161,9,0	1/1:10,0:9:26.65:180,27,0	./.	./.	1/1:32,0:29:63.60:468,64,0	1/1:22,0:20:47.30:313,47,0	1/1:16,0:16:18.17:211,18,0	1/1:28,0:28:18.80:361,19,0	1/1:24,1:25:24.88:377,25,0	1/1:27,0:26:30.68:391,31,0	1/1:35,0:33:88.20:666,88,0	1/1:20,0:20:48.20:319,48,0	1/1:16,0:16:11.95:165,12,0	1/1:17,1:18:6.60:252,7,0	1/1:30,0:30:41.24:506,41,0	1/1:23,1:23:66.08:464,66,0	1/1:10,0:10:20.60:128,21,0	1/1:13,0:13:34.97:198,35,0	1/1:9,0:9:5.52:108,6,0	1/1:40,0:39:91.59:635,92,0	1/1:7,0:7:13.65:94,14,0	1/1:18,0:17:40.52:298,41,0	1/1:24,0:19:50.66:379,51,0	1/1:10,1:11:20.78:156,21,0	1/1:14,0:14:24.49:248,24,0	1/1:21,0:20:19.72:277,20,0	1/1:41,0:40:79.95:623,80,0	1/1:2,0:2:5.87:35,6,0
chr10	25247394	.	A	AACAC	13188.93	PASS	AB=0.729;AC=43;AF=0.768;AN=56;BaseQRankSum=-5.817;DP=542;FS=0.743;HRun=0;HaplotypeScore=92.2194;InbreedingCoeff=0.4466;MQ=67.81;MQ0=4;MQRankSum=1.420;QD=28.24;ReadPosRankSum=2.979;VQSLOD=4.7753;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:17:5.62:89,6,0	1/1:4,11:15:20.67:504,21,0	0/1:43,0:30:0.56:1,0,153	0/0:26,0:20:11.89:0,12,198	1/1:7,16:26:39.13:939,39,0	1/1:12,12:27:32.85:734,33,0	1/1:2,4:7:8.77:157,9,0	0/0:31,0:32:27.08:0,27,395	1/1:5,6:12:20.81:446,21,0	1/1:9,15:24:45.35:935,45,0	1/1:5,11:20:26.83:590,27,0	1/1:4,6:10:17.80:356,18,0	1/1:5,19:24:51.18:1228,51,0	0/1:3,12:16:15.19:654,0,15	1/1:11,0:22:18.84:82,19,0	1/1:4,12:18:35.86:808,36,0	0/0:10,0:11:2.38:0,2,50	0/0:1,0:4:9.01:0,9,84	0/1:7,2:10:33.26:227,0,33	0/1:20,18:39:67.19:1030,0,67	1/1:4,6:11:9.03:217,9,0	1/1:4,6:9:15.05:361,15,0	1/1:9,13:24:35.95:810,36,0	1/1:5,4:8:9.03:217,9,0	1/1:5,10:17:23.55:458,24,0	1/1:5,16:26:62.10:1158,62,0	1/1:5,12:21:29.77:707,30,0	0/1:7,8:15:24.23:482,0,24
chr10	25247406	.	C	CACACACACAA	503.12	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=12.998;DP=592;FS=6.970;HRun=0;HaplotypeScore=193.3929;InbreedingCoeff=-0.2267;MQ=62.76;MQ0=6;MQRankSum=-0.816;QD=1.49;ReadPosRankSum=12.385;VQSLOD=-0.2816;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,14:25:4.24:301,4,0	0/1:16,0:16:3.54:4,0,57	0/0:58,0:29:47.51:0,48,688	0/0:35,0:23:47.56:0,48,655	0/1:31,0:31:13.61:14,0,86	0/1:24,0:24:6.69:7,0,105	0/0:10,0:10:7.64:0,8,102	0/0:32,0:31:68.93:0,69,1135	0/1:11,0:11:9.60:10,0,45	0/1:28,0:27:83.41:83,0,183	0/1:21,0:21:11.43:11,0,44	0/0:15,0:14:9.51:0,10,143	0/1:23,0:23:20.43:32,0,20	0/1:16,0:16:81.08:81,0,98	0/0:21,0:21:33.02:0,33,345	0/1:17,0:17:15.14:15,0,59	0/0:12,0:11:8.70:0,9,156	0/0:6,0:6:14.98:0,15,259	0/1:15,0:15:11.72:12,0,218	0/0:36,0:36:3.46:0,3,396	0/0:15,0:15:5.30:0,5,89	1/1:9,0:8:2.54:11,3,0	0/1:22,0:22:9.30:9,0,94	0/1:11,0:10:1.25:1,0,38	0/1:19,0:19:1.06:1,0,100	0/1:25,0:24:53.87:54,0,161	0/1:24,0:24:1.69:2,0,100	0/0:15,0:15:2.88:0,3,172
chr10	25247640	.	G	GA	209.90	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-1.000;DP=488;FS=1.297;HRun=6;HaplotypeScore=53.4381;InbreedingCoeff=0.9595;MQ=81.96;MQ0=0;MQRankSum=-2.862;QD=19.08;ReadPosRankSum=0.193;VQSLOD=3.0620;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:57.12:0,57,581	0/0:10,0:10:30.05:0,30,299	0/0:29,0:29:70.48:0,70,692	0/0:15,0:15:35.25:0,35,325	0/0:27,0:27:72.15:0,72,734	0/0:24,0:24:57.12:0,57,581	0/0:20,0:20:48.06:0,48,489	0/0:15,0:15:36.96:0,37,364	0/0:18,0:18:51.12:0,51,520	0/0:24,0:24:69.14:0,69,696	0/0:19,0:19:48.11:0,48,490	0/0:15,0:15:42.09:0,42,428	0/0:15,0:15:39.09:0,39,397	0/0:17,0:17:45.10:0,45,458	0/0:12,0:12:33.08:0,33,337	0/0:19,0:19:54.11:0,54,545	1/1:0,4:4:9.03:113,9,0	1/1:1,6:7:18.02:209,18,0	0/0:21,0:21:48.10:0,48,489	0/0:22,0:22:66.15:0,66,673	0/0:17,0:17:45.10:0,45,459	0/0:9,0:9:18.04:0,18,184	0/0:21,0:21:54.12:0,54,551	0/0:9,0:9:27.06:0,27,275	0/0:15,0:15:42.07:0,42,420	0/0:22,0:22:60.13:0,60,612	0/0:24,0:24:60.13:0,60,612	0/0:13,0:13:36.08:0,36,367
chr10	25253568	.	G	GA	1121.82	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-6.288;DP=695;FS=6.126;HRun=8;HaplotypeScore=65.2845;InbreedingCoeff=0.8762;MQ=90.25;MQ0=0;MQRankSum=-3.142;QD=24.39;ReadPosRankSum=2.681;VQSLOD=4.5452;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,41:46:99:1217,108,0	0/0:13,1:14:4.38:0,4,290	0/0:31,0:32:64.90:0,65,557	0/0:31,0:29:53.21:0,53,456	0/0:36,0:36:99:0,99,905	0/0:27,0:27:75.03:0,75,686	0/0:20,0:20:47.98:0,48,429	0/0:25,0:25:72:0,72,646	0/0:28,0:28:75.03:0,75,682	0/0:29,0:29:78.03:0,78,711	0/0:28,0:29:71.05:0,71,632	0/0:19,0:19:54:0,54,485	0/0:25,0:25:66.03:0,66,604	0/0:26,0:26:75.04:0,75,686	0/0:20,0:20:51.02:0,51,467	0/0:19,0:19:51.01:0,51,462	0/0:16,0:16:44.96:0,45,398	0/0:18,0:18:45:0,45,406	0/0:20,0:20:51.02:0,51,463	0/0:40,0:40:99:0,102,925	0/0:14,0:14:36.02:0,36,329	0/0:25,0:25:69.03:0,69,631	0/0:29,0:29:81.01:0,81,731	0/0:15,0:15:39.02:0,39,357	0/0:22,1:23:28.39:0,28,503	0/0:28,0:28:78.02:0,78,707	0/0:26,0:26:66.02:0,66,598	0/0:15,0:15:32.97:0,33,294
chr10	25253943	.	AT	A	1016.36	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=6.783;DP=625;FS=0.000;HRun=8;HaplotypeScore=60.2850;InbreedingCoeff=0.9977;MQ=82.72;MQ0=0;MQRankSum=-2.093;QD=21.62;ReadPosRankSum=0.622;VQSLOD=3.8904;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:63.19:0,63,760	0/0:9,0:9:21.06:0,21,254	0/0:18,0:18:42.11:0,42,473	0/0:19,0:19:44.96:0,45,493	0/0:29,1:30:58.29:0,58,985	0/0:17,0:17:51.14:0,51,595	0/0:19,0:19:54.16:0,54,641	0/0:25,0:25:54.15:0,54,632	0/0:23,0:23:40.38:0,40,702	0/0:29,0:29:78.23:0,78,930	0/0:23,0:23:63.18:0,63,751	0/0:17,0:17:45.14:0,45,544	0/0:16,0:16:39.11:0,39,460	0/0:26,0:26:69.20:0,69,821	1/1:2,21:23:60.09:579,60,0	0/0:19,0:19:54.12:0,54,625	1/1:2,13:15:36.06:348,36,0	1/1:1,8:9:24.04:232,24,0	0/0:27,0:27:72.21:0,72,859	0/0:26,0:26:66.20:0,66,797	0/0:28,0:28:72.21:0,72,858	0/0:26,0:26:75.23:0,75,906	0/0:35,0:35:99:0,105,1238	0/0:21,0:21:54.12:0,54,636	0/0:21,0:21:60.18:0,60,725	0/0:33,0:33:55.54:0,56,950	0/0:27,0:27:75.23:0,75,906	0/0:20,0:20:54.17:0,54,652
chr10	25257001	.	CA	C	11036.25	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=10.981;DP=620;FS=0.384;HRun=9;HaplotypeScore=62.1754;InbreedingCoeff=0.9985;MQ=57.12;MQ0=2;MQRankSum=3.214;QD=23.28;ReadPosRankSum=3.757;VQSLOD=5.5868;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,14:23:41.99:383,42,0	1/1:0,11:11:27.01:247,27,0	0/0:14,0:9:27.06:0,27,291	0/0:14,0:12:21.06:0,21,242	1/1:1,32:33:90.04:823,90,0	1/1:4,23:27:63.03:577,63,0	1/1:1,16:17:42.02:385,42,0	0/0:28,0:28:69.20:0,69,788	1/1:0,13:13:39.02:357,39,0	1/1:0,21:20:57.02:517,57,0	1/1:1,22:23:63.03:576,63,0	1/1:3,11:14:30.01:274,30,0	1/1:1,18:19:51.03:467,51,0	1/1:1,15:16:39.02:357,39,0	0/0:32,0:32:90.26:0,90,1029	1/1:1,21:22:54.03:494,54,0	0/0:34,0:34:81.24:0,81,933	0/0:23,0:24:62.96:0,63,679	1/1:0,10:10:30.02:275,30,0	1/1:2,19:21:57.03:522,57,0	1/1:0,29:29:84.05:769,84,0	1/1:3,27:30:72.02:659,72,0	1/1:4,18:22:51.02:467,51,0	1/1:3,18:21:48.02:439,48,0	1/1:2,22:24:63.03:577,63,0	1/1:2,23:25:69.04:631,69,0	1/1:2,34:37:98.09:884,98,0	1/1:1,15:16:39.01:357,39,0
chr10	25258029	.	C	CA	960.76	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-1.664;DP=546;FS=0.588;HRun=10;HaplotypeScore=60.1336;InbreedingCoeff=0.9720;MQ=66.50;MQ0=0;MQRankSum=-1.553;QD=17.47;ReadPosRankSum=0.554;VQSLOD=4.1163;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:0,0:22:42.78:0,43,124	0/0:9,0:9:26.97:0,27,222	0/0:15,0:14:8.97:0,9,73	0/0:14,0:14:15.06:0,15,125	0/0:28,0:29:67.16:0,67,537	0/0:27,0:27:71.91:0,72,591	0/0:11,0:11:26.95:0,27,222	0/0:31,0:31:74.84:0,75,610	0/0:18,0:18:41.93:0,42,343	0/0:24,0:24:62.89:0,63,515	0/0:27,0:27:65.71:0,66,527	0/0:12,0:12:29.96:0,30,246	0/0:20,0:20:44.91:0,45,366	0/0:13,0:13:38.96:0,39,320	1/1:3,0:17:30.05:157,30,0	0/0:19,0:19:50.73:0,51,405	1/1:2,19:21:48.12:512,48,0	1/1:2,15:17:42.05:435,42,0	0/0:19,0:19:46.72:0,47,369	0/0:33,0:33:77.89:0,78,640	0/0:17,0:17:27.56:0,28,349	0/0:17,0:17:50.85:0,51,410	0/0:20,0:20:41.93:0,42,345	0/0:11,0:11:26.97:0,27,222	0/0:27,0:27:65.90:0,66,542	0/0:18,0:19:49.95:0,50,397	0/0:20,0:20:53.76:0,54,422	0/0:15,0:15:35.94:0,36,296
chr10	25258206	.	GA	G	1268.86	PASS	AB=0.521;AC=3;AF=0.054;AN=56;BaseQRankSum=5.606;DP=603;FS=2.978;HRun=2;HaplotypeScore=73.3971;InbreedingCoeff=0.6256;MQ=60.64;MQ0=4;MQRankSum=2.140;QD=30.21;ReadPosRankSum=2.537;VQSLOD=3.3765;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:96.28:0,96,1407	0/0:5,0:5:15.05:0,15,225	0/0:30,0:20:57.17:0,57,812	0/0:30,0:24:60.16:0,60,832	0/0:31,0:31:87.28:0,87,1282	0/0:27,0:27:81.26:0,81,1192	0/0:15,0:15:45.15:0,45,674	0/0:35,0:35:99:0,99,1411	0/0:20,0:20:60.19:0,60,879	0/0:28,0:28:81.26:0,81,1192	0/0:22,0:22:60.20:0,60,899	0/0:12,0:12:36.12:0,36,540	0/0:18,0:18:54.18:0,54,808	0/0:14,0:14:42.13:0,42,609	0/0:18,0:18:51.17:0,51,765	0/0:18,0:18:54.18:0,54,808	0/1:2,23:25:16.42:785,0,16	1/1:1,16:17:12.45:584,12,0	0/0:25,0:23:66.22:0,66,988	0/0:34,0:34:99:0,102,1526	0/0:19,0:19:57.19:0,57,854	0/0:23,0:23:69.23:0,69,1033	0/0:17,0:17:51.17:0,51,764	0/0:15,0:15:36.12:0,36,538	0/0:19,0:19:57.19:0,57,854	0/0:20,0:20:60.20:0,60,882	0/0:23,0:23:69.23:0,69,1034	0/0:11,0:11:33.09:0,33,473
chr10	25258812	.	T	TA	390.47	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=-1.541;DP=564;FS=0.000;HRun=8;HaplotypeScore=57.7338;InbreedingCoeff=0.6827;MQ=62.69;MQ0=1;MQRankSum=-1.328;QD=13.95;ReadPosRankSum=1.004;VQSLOD=3.1865;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,15:17:42.12:485,42,0	0/0:13,0:13:36.02:0,36,329	0/0:9,0:7:18.01:0,18,165	0/0:6,0:4:7.69:0,8,80	0/0:31,0:30:74.96:0,75,676	0/0:28,0:28:74.99:0,75,678	0/0:13,0:13:35.94:0,36,318	0/0:22,0:22:63.01:0,63,572	0/0:22,0:22:59.96:0,60,533	0/0:35,0:35:84.01:0,84,769	0/0:19,0:18:42.01:0,42,379	0/0:22,0:22:62.98:0,63,568	0/0:14,0:14:35.99:0,36,320	0/0:18,0:18:51.02:0,51,463	0/0:11,0:11:30.01:0,30,274	0/0:18,0:18:45.01:0,45,408	0/0:22,0:22:44.03:0,44,457	0/0:27,0:27:68.99:0,69,621	0/0:23,0:23:63.03:0,63,577	0/0:29,0:29:78.04:0,78,714	0/0:10,0:10:27.01:0,27,247	0/0:18,0:18:42.01:0,42,384	0/0:26,0:24:66.03:0,66,604	0/1:11,0:11:3.60:4,0,144	0/0:23,0:23:51.84:0,52,587	0/0:26,1:27:31.40:0,31,542	0/0:32,0:32:84.02:0,84,763	0/0:18,0:18:54.03:0,54,494
chr10	25258814	.	A	AC	39.17	PASS	AB=0.846;AC=3;AF=0.054;AN=56;BaseQRankSum=6.288;DP=569;FS=0.818;HRun=0;HaplotypeScore=60.5039;InbreedingCoeff=0.5492;MQ=62.66;MQ0=1;MQRankSum=-1.197;QD=1.40;ReadPosRankSum=0.364;VQSLOD=1.5598;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:16,1:17:12.98:103,13,0	0/0:13,0:13:36.12:0,36,503	0/0:9,0:7:14.22:0,14,213	0/0:6,0:4:3.34:0,3,117	0/0:28,2:29:84.21:0,84,1114	0/0:29,0:29:79.13:0,79,1061	0/0:14,0:14:42.11:0,42,547	0/0:23,0:23:69.21:0,69,932	0/0:22,0:22:66.20:0,66,887	0/0:32,0:32:67.44:0,67,1228	0/0:18,0:18:45.14:0,45,612	0/0:23,0:23:69.21:0,69,931	0/0:14,0:14:42.12:0,42,553	0/0:19,0:19:54.17:0,54,739	0/0:11,0:11:33.10:0,33,446	0/0:17,0:17:51.16:0,51,683	0/0:21,0:21:51.77:0,52,777	0/0:29,0:29:58.24:0,58,987	0/0:24,0:24:69.22:0,69,934	0/0:29,0:29:87.26:0,87,1168	0/0:10,0:10:30.09:0,30,404	0/0:17,0:17:51.14:0,51,663	0/0:25,2:25:72.22:0,72,967	0/1:9,2:11:36.45:36,0,227	0/0:25,0:25:71.90:0,72,960	0/0:29,1:30:70.81:0,71,978	0/0:31,0:31:93.28:0,93,1251	0/0:18,0:18:54.18:0,54,753
chr10	25260002	.	AAC	A	591.81	PASS	AC=18;AF=0.900;AN=20;BaseQRankSum=1.085;DP=206;FS=0.000;HRun=0;HaplotypeScore=56.5837;InbreedingCoeff=0.1602;MQ=8.17;MQ0=189;MQRankSum=0.651;QD=10.57;ReadPosRankSum=-0.868;VQSLOD=2.5630;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	./.	./.	./.	./.	./.	1/1:8,1:1:3.01:45,3,0	1/1:2,1:1:3.01:46,3,0	./.	./.	./.	./.	1/1:6,1:1:3.01:46,3,0	./.	./.	./.	1/1:0,1:1:3.01:46,3,0	./.	1/1:2,1:1:3.01:46,3,0	1/1:3,1:1:3.01:45,3,0	0/0:9,0:1:2.99:0,3,24	1/1:1,4:4:12.04:172,12,0	1/1:7,2:2:6.02:91,6,0	1/1:12,3:3:9.03:137,9,0	./.
chr10	25260096	.	CTG	C	1733.50	PASS	AC=38;AF=1.000;AN=38;DP=271;FS=0.000;HRun=0;HaplotypeScore=160.5099;InbreedingCoeff=-0.0691;MQ=14.42;MQ0=202;QD=11.11;VQSLOD=3.3536;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	1/1:0,5:5:15.02:142,15,0	./.	./.	1/1:8,3:3:9.01:82,9,0	1/1:5,2:2:6.01:56,6,0	1/1:7,2:2:6.01:57,6,0	./.	1/1:6,2:2:3:28,3,0	1/1:6,3:3:9.02:91,9,0	1/1:2,7:7:18.01:165,18,0	1/1:4,2:2:6.01:56,6,0	1/1:4,2:2:6.01:55,6,0	1/1:1,2:2:3:27,3,0	1/1:6,3:3:9.01:84,9,0	1/1:4,4:4:12.01:111,12,0	./.	./.	./.	1/1:3,8:8:24.03:226,24,0	./.	1/1:8,4:4:12.01:112,12,0	1/1:7,4:4:12.01:110,12,0	1/1:0,2:2:5.50:36,5,0	1/1:4,7:7:21.02:198,21,0	1/1:5,2:2:6.01:61,6,0	1/1:8,4:4:12.01:110,12,0	./.
chr10	25260100	.	GA	G	411.01	PASS	AB=0.500;AC=37;AF=0.925;AN=40;BaseQRankSum=2.375;DP=270;FS=0.000;HRun=1;HaplotypeScore=168.6507;InbreedingCoeff=0.2882;MQ=14.66;MQ0=199;MQRankSum=0.468;QD=2.65;ReadPosRankSum=2.375;VQSLOD=-0.2886;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	1/1:0,5:5:11.86:40,12,0	./.	./.	1/1:8,3:3:7.11:24,7,0	1/1:5,2:2:4.74:16,5,0	1/1:7,2:2:4.74:16,5,0	./.	1/1:5,2:2:2.37:8,2,0	1/1:6,3:3:7.49:27,7,0	1/1:2,7:7:14.23:46,14,0	1/1:4,2:2:4.74:16,5,0	1/1:4,2:2:4.74:16,5,0	1/1:1,2:2:2.37:8,2,0	1/1:6,3:3:7.11:24,7,0	1/1:4,4:4:9.49:31,9,0	./.	0/0:13,1:3:3.01:0,3,46	./.	1/1:3,8:8:18.97:64,19,0	./.	1/1:8,4:4:9.49:32,9,0	1/1:7,4:4:9.49:31,9,0	0/1:0,2:2:2.60:3,0,5	1/1:4,7:7:16.60:56,17,0	1/1:5,2:2:5.09:19,5,0	1/1:8,4:4:9.49:31,9,0	./.
chr10	25260102	.	TTACACCTCACA	T	5722.71	PASS	AB=0.933;AC=39;AF=0.975;AN=40;BaseQRankSum=1.525;DP=266;FS=0.000;HRun=0;HaplotypeScore=162.4345;InbreedingCoeff=-0.0897;MQ=14.77;MQ0=195;MQRankSum=-0.440;QD=33.86;ReadPosRankSum=1.681;VQSLOD=4.0746;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	1/1:0,5:5:15.05:441,15,0	./.	./.	1/1:8,3:3:9.03:263,9,0	1/1:5,2:2:6.02:177,6,0	1/1:7,2:2:6.02:176,6,0	./.	1/1:5,2:2:3.01:88,3,0	1/1:6,3:3:9.03:270,9,0	1/1:2,7:7:18.06:523,18,0	1/1:4,2:2:6.02:175,6,0	1/1:4,2:2:6.02:176,6,0	1/1:1,2:2:3.01:88,3,0	1/1:6,3:3:9.03:266,9,0	1/1:4,4:4:12.04:349,12,0	./.	0/1:13,1:3:19.98:20,0,122	./.	1/1:3,8:8:24.08:705,24,0	./.	1/1:8,4:4:12.04:353,12,0	1/1:7,4:4:12.04:350,12,0	1/1:0,2:2:6.02:155,6,0	1/1:4,7:7:21.07:616,21,0	1/1:5,2:2:6.02:181,6,0	1/1:8,4:4:12.04:350,12,0	./.
chr10	25260139	.	AAAC	A	8065.82	PASS	AC=52;AF=1.000;AN=52;DP=284;FS=0.000;HRun=0;HaplotypeScore=200.7537;InbreedingCoeff=-0.0184;MQ=23.78;MQ0=101;QD=30.10;VQSLOD=4.4718;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,9:9:24.08:412,24,0	1/1:0,6:6:18.06:309,18,0	./.	./.	1/1:5,12:12:29.95:418,30,0	1/1:0,15:15:42.10:689,42,0	1/1:9,4:4:6.02:102,6,0	1/1:4,2:2:6.02:103,6,0	1/1:5,8:8:18.06:309,18,0	1/1:5,9:9:24.08:412,24,0	1/1:1,12:12:30.10:507,30,0	1/1:1,7:7:21.07:360,21,0	1/1:1,5:5:15.01:226,15,0	1/1:0,6:6:15.05:257,15,0	1/1:4,5:5:15.05:258,15,0	1/1:2,5:5:15.05:258,15,0	1/1:6,4:4:11.99:173,12,0	1/1:5,5:5:12.04:207,12,0	1/1:3,6:6:14.93:164,15,0	1/1:2,16:16:36.07:585,36,0	1/1:6,1:1:2.97:20,3,0	1/1:4,10:10:30.10:515,30,0	1/1:4,10:10:30.06:483,30,0	1/1:0,2:2:5.97:70,6,0	1/1:3,6:6:18.06:309,18,0	1/1:2,5:5:15.05:255,15,0	1/1:7,10:10:30.10:511,30,0	1/1:1,3:3:9.03:155,9,0
chr10	25262540	.	TC	T	2117.32	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.404;DP=569;FS=1.690;HRun=2;HaplotypeScore=82.3271;InbreedingCoeff=0.9909;MQ=69.76;MQ0=0;MQRankSum=1.603;QD=33.61;ReadPosRankSum=2.874;VQSLOD=3.9867;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,102,1462	0/0:9,0:9:27.06:0,27,381	0/0:14,0:14:42.03:0,42,559	0/0:15,0:15:41.97:0,42,532	0/0:20,0:20:57.13:0,57,806	0/0:22,0:22:66.21:0,66,967	0/0:27,0:27:78.04:0,78,1078	0/0:19,0:19:51.17:0,51,763	0/0:19,0:19:57.10:0,57,801	0/0:22,0:22:60.19:0,60,880	0/0:14,0:14:39.05:0,39,536	0/0:20,0:20:57.19:0,57,853	0/0:27,0:27:78.17:0,78,1096	0/0:20,0:20:60.14:0,60,871	0/0:15,0:15:45.15:0,45,673	0/0:17,0:17:51.12:0,51,730	1/1:1,34:35:96.27:1226,96,0	1/1:0,28:28:78.25:1012,78,0	0/0:12,0:12:36.11:0,36,519	0/0:11,0:11:33.11:0,33,494	0/0:67,0:67:99:0,192,2823	0/0:16,0:16:48.11:0,48,690	0/0:11,0:11:33.10:0,33,475	0/0:16,0:16:42.06:0,42,600	0/0:13,0:13:39.08:0,39,539	0/0:20,0:20:60.18:0,60,876	0/0:18,0:18:54.14:0,54,766	0/0:5,0:5:15.05:0,15,218
chr10	25267591	.	CAA	C	10451.90	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-3.886;DP=501;FS=17.600;HRun=11;HaplotypeScore=69.6012;InbreedingCoeff=0.9813;MQ=75.23;MQ0=2;MQRankSum=-1.039;QD=25.74;ReadPosRankSum=4.090;VQSLOD=3.0377;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,19:20:53.39:574,53,0	1/1:0,7:8:20.79:204,21,0	0/0:14,0:15:23.23:0,23,232	0/0:6,0:6:9.39:0,9,99	1/1:1,27:27:69.12:734,69,0	1/1:1,27:28:72.18:766,72,0	1/1:2,7:10:14.98:215,15,0	0/0:32,0:32:66.19:0,66,930	1/1:0,13:13:36.09:383,36,0	1/1:4,15:19:45.08:479,45,0	1/1:4,27:31:75.15:798,75,0	1/1:3,13:16:36.08:383,36,0	1/1:4,14:18:38.81:414,39,0	1/1:0,13:13:39.10:415,39,0	0/0:0,0:10:24.04:0,24,230	1/1:4,12:15:27.04:287,27,0	0/0:1,0:14:30.05:0,30,287	0/0:6,0:16:36.08:0,36,402	1/1:2,14:16:42.10:447,42,0	1/1:1,29:30:84.19:894,84,0	1/1:1,10:11:24.06:255,24,0	1/1:2,12:14:30.05:319,30,0	1/1:2,20:22:54.12:575,54,0	1/1:2,13:15:39.09:415,39,0	1/1:4,20:25:57.11:607,57,0	1/1:2,18:20:51.05:522,51,0	1/1:4,19:22:54.13:575,54,0	1/1:4,6:10:17.98:192,18,0
chr10	25268131	.	T	TCAATGATCATGACAGTT	23446.23	PASS	AB=0.667;AC=55;AF=0.982;AN=56;BaseQRankSum=0.000;DP=219;FS=10.820;HRun=0;HaplotypeScore=255.8163;InbreedingCoeff=-0.0580;MQ=57.32;MQ0=0;MQRankSum=-1.622;QD=107.06;ReadPosRankSum=1.294;VQSLOD=2.8528;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:15:30.08:1243,30,0	1/1:2,0:2:6.02:444,6,0	1/1:2,1:4:6.02:469,6,0	0/1:2,0:4:14.17:376,0,14	1/1:9,0:9:17.93:413,18,0	1/1:16,0:16:31.92:1462,32,0	1/1:4,0:4:12.04:754,12,0	1/1:8,0:8:21.07:1486,21,0	1/1:6,0:6:13.28:529,13,0	1/1:9,0:9:23.75:1050,24,0	1/1:11,0:11:21.07:1173,21,0	1/1:10,0:10:27.09:1653,27,0	1/1:7,0:7:15.05:583,15,0	1/1:9,0:9:22.32:1223,22,0	1/1:7,0:7:15.05:649,15,0	1/1:4,0:4:9.03:481,9,0	1/1:6,0:6:12.04:600,12,0	1/1:2,0:2:4.26:82,4,0	1/1:5,0:5:15.03:402,15,0	1/1:14,0:14:28.34:1092,28,0	1/1:3,0:3:3.01:221,3,0	1/1:13,0:13:30.10:1308,30,0	1/1:11,0:11:27.09:1760,27,0	1/1:6,0:6:3.01:221,3,0	1/1:13,0:13:24.08:1406,24,0	1/1:10,0:10:18.53:1292,19,0	1/1:9,0:9:15.05:1035,15,0	1/1:2,0:2:3.48:40,3,0
chr10	25268643	.	TGG	T	3717.29	PASS	AB=1.000;AC=42;AF=0.750;AN=56;BaseQRankSum=-1.500;DP=459;FS=11.261;HRun=4;HaplotypeScore=98.5173;InbreedingCoeff=0.5109;MQ=66.00;MQ0=15;MQRankSum=-0.647;QD=10.47;ReadPosRankSum=2.060;VQSLOD=-0.2984;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:30:18.72:338,19,0	1/1:7,0:7:13.33:116,13,0	0/0:21,0:15:38.97:0,39,367	0/0:21,0:13:38.91:0,39,376	1/1:14,0:13:20.94:169,21,0	1/1:21,0:22:45.35:360,45,0	1/1:9,0:9:26.94:218,27,0	0/0:26,0:24:65.79:0,66,591	1/1:23,0:23:1.85:172,2,0	1/1:22,0:20:14.30:263,14,0	1/1:7,11:18:2.12:15,2,0	1/1:9,0:9:22.10:157,22,0	0/1:13,0:11:1.44:111,0,1	1/1:15,0:15:19.83:159,20,0	0/1:13,0:13:33.45:154,0,33	0/1:14,0:14:12.27:48,0,12	0/0:21,0:21:28.50:0,29,307	0/0:15,0:15:13.16:0,13,193	1/1:17,0:17:19.02:350,19,0	1/1:5,11:14:4.57:22,5,0	1/1:18,0:18:22.52:176,23,0	1/1:6,0:6:5.78:46,6,0	1/1:12,0:11:7.24:52,7,0	1/1:15,0:15:26.78:196,27,0	1/1:7,0:7:3.84:21,4,0	1/1:6,14:19:13.79:239,14,0	1/1:23,0:23:5.78:282,6,0	0/1:12,0:11:6.63:53,0,7
chr10	25268645	.	G	GT	118.23	PASS	AB=0.907;AC=10;AF=0.179;AN=56;BaseQRankSum=4.543;DP=467;FS=26.151;HRun=0;HaplotypeScore=112.2608;InbreedingCoeff=-0.0841;MQ=63.21;MQ0=19;MQRankSum=-1.707;QD=0.77;ReadPosRankSum=-3.500;VQSLOD=-0.5649;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,1:33:18.87:0,19,180	0/0:8,0:8:20.04:0,20,109	0/0:19,0:13:39.06:0,39,490	0/0:21,0:13:39.13:0,39,543	0/1:14,1:14:4.95:5,0,96	0/0:22,0:22:38.80:0,39,198	0/0:10,0:9:20.15:0,20,93	0/0:27,0:24:66.03:0,66,869	0/1:24,1:24:9.70:10,0,102	0/1:23,0:21:44.85:45,0,127	0/1:19,1:20:12.66:13,0,50	0/0:9,0:9:1.67:0,2,76	0/1:12,1:11:26.34:26,0,83	0/1:13,1:14:9.39:9,0,46	0/0:13,0:13:1.21:0,1,100	0/1:11,4:15:3.23:71,0,3	0/0:22,0:22:38.60:0,39,608	0/0:14,0:14:33:0,33,427	0/0:16,0:16:9.49:0,9,149	1/1:16,0:14:1.80:13,2,0	0/0:17,0:16:23.43:0,23,126	0/0:8,0:8:2.27:0,2,17	0/0:12,1:12:8.54:0,9,44	0/0:16,0:16:2.02:0,2,89	0/0:5,0:5:0.83:0,1,15	0/0:18,1:18:8.27:0,8,159	0/0:20,1:22:0.99:0,1,226	0/1:8,4:11:18.56:55,0,19
chr10	25268646	.	GGTGT	G	194.49	PASS	AC=4;AF=0.077;AN=52;BaseQRankSum=-1.688;DP=517;FS=0.000;HRun=0;HaplotypeScore=141.4646;InbreedingCoeff=0.4317;MQ=59.71;MQ0=19;MQRankSum=1.907;QD=5.12;ReadPosRankSum=1.450;VQSLOD=2.4231;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:37:15.43:0,15,239	0/0:11,0:11:6.02:0,6,75	./.	./.	0/0:17,0:17:4.06:0,4,20	0/0:26,0:26:9.26:0,9,94	0/0:16,0:15:1.36:0,1,2	0/0:28,0:25:15.04:0,15,176	0/0:24,0:24:12.02:0,12,146	0/0:28,0:26:36.37:0,36,460	0/0:20,0:21:3.01:0,3,52	0/0:13,0:13:4.57:0,5,50	0/0:12,0:11:7.44:0,7,164	0/0:14,0:15:9.16:0,9,131	0/0:12,0:12:21.04:0,21,346	0/0:19,0:23:19.42:0,19,303	1/1:14,10:24:14.03:204,14,0	1/1:9,5:14:5.55:93,6,0	0/0:18,0:18:5.95:0,6,60	0/0:16,0:14:8.99:0,9,102	0/0:20,0:19:3.90:0,4,52	0/0:9,0:9:6.49:0,6,108	0/0:12,0:12:2.43:0,2,10	0/0:17,0:16:3.11:0,3,8	0/0:6,0:6:3:0,3,28	0/0:18,0:18:17.99:0,18,268	0/0:22,0:24:25.54:0,26,364	0/0:8,0:11:21.07:0,21,340
chr10	25269061	.	T	TA	10089.48	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-6.753;DP=529;FS=2.835;HRun=10;HaplotypeScore=56.0529;InbreedingCoeff=0.9654;MQ=79.63;MQ0=0;MQRankSum=-1.727;QD=22.98;ReadPosRankSum=3.353;VQSLOD=5.7614;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,0:27:48.29:242,48,0	1/1:1,10:11:27.07:288,27,0	0/0:13,0:14:11.45:0,11,66	0/0:11,0:12:15.56:0,16,124	1/1:4,19:23:57.05:571,57,0	1/1:6,17:23:51.09:532,51,0	1/1:1,9:10:27.07:288,27,0	0/0:34,0:34:79.89:0,80,643	1/1:2,12:14:11.45:327,11,0	1/1:5,14:19:39.09:409,39,0	1/1:5,15:20:17.42:379,17,0	1/1:0,17:18:44.95:462,45,0	1/1:2,13:15:33.08:352,33,0	1/1:2,18:20:42.07:436,42,0	1/1:5,0:14:25.77:137,26,0	1/1:1,17:18:48.12:512,48,0	0/0:21,0:21:56.60:0,57,452	0/0:9,0:9:26.97:0,27,221	1/1:3,7:10:21.05:224,21,0	1/1:3,20:24:65.83:635,66,0	1/1:1,12:13:11.45:327,11,0	1/1:3,24:28:68.90:702,69,0	1/1:3,16:20:48.08:500,48,0	1/1:1,12:13:27.07:288,27,0	1/1:2,23:25:41.56:647,42,0	1/1:2,25:27:75.15:783,75,0	1/1:7,21:28:35.50:576,35,0	1/1:2,17:19:16.63:475,17,0
chr10	25271102	.	TC	T	272.43	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.425;DP=728;FS=3.457;HRun=7;HaplotypeScore=124.0673;InbreedingCoeff=0.9907;MQ=69.01;MQ0=13;MQRankSum=-0.367;QD=18.16;ReadPosRankSum=0.590;VQSLOD=2.4949;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:90.23:0,90,1090	0/0:12,0:12:33.03:0,33,383	0/0:63,0:27:54.05:0,54,579	0/0:77,1:40:17.84:0,18,603	0/0:26,0:26:66.19:0,66,813	0/0:30,0:30:81.25:0,81,1005	0/0:21,0:21:63.18:0,63,776	0/0:20,0:19:39.08:0,39,473	0/0:37,0:37:99:0,100,1236	0/0:37,0:37:99:0,102,1259	0/0:21,0:20:60.19:0,60,755	0/0:17,0:17:48.12:0,48,577	0/0:26,0:26:75.16:0,75,894	0/0:26,0:26:75.24:0,75,944	1/1:1,14:15:36.08:367,36,0	0/0:17,0:17:48.15:0,48,604	0/0:15,0:15:36.09:0,36,437	0/0:14,0:14:36.59:0,37,453	0/0:19,0:19:48.10:0,48,560	0/0:22,0:22:54.57:0,55,679	0/0:20,0:20:57.17:0,57,696	0/0:29,0:29:78.23:0,78,957	0/0:18,0:18:51.16:0,51,640	0/0:20,0:21:51.15:0,51,630	0/0:24,0:24:63.20:0,63,792	0/0:26,0:26:75.24:0,75,944	0/0:29,0:29:78.25:0,78,981	0/0:13,0:13:32.66:0,33,415
chr10	25272774	.	AGAGGGATGGCAAGAAAGC	A	2243.34	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.670;DP=683;FS=3.422;HRun=0;HaplotypeScore=307.1007;InbreedingCoeff=0.9987;MQ=74.30;MQ0=0;MQRankSum=-5.905;QD=83.09;ReadPosRankSum=1.606;VQSLOD=2.7296;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:47:99:0,141,10217	0/0:15,0:15:45.15:0,45,3958	0/0:15,0:15:39.13:0,39,2180	0/0:17,0:17:41.25:0,41,2761	0/0:29,0:29:75.24:0,75,5504	0/0:21,0:21:63.18:0,63,4339	0/0:28,0:28:72.19:0,72,4473	0/0:30,0:30:90.29:0,90,6000	0/0:23,0:23:66.23:0,66,4811	0/0:22,0:22:66.22:0,66,5052	0/0:27,0:26:68.90:0,69,5418	0/0:24,0:24:72.23:0,72,5461	0/0:26,0:26:75.15:0,75,4601	0/0:22,0:22:65.99:0,66,4365	1/1:0,27:26:45.15:2338,45,0	0/0:28,0:28:84.29:0,84,6649	0/0:25,0:25:63.22:0,63,5105	0/0:9,0:9:27.09:0,27,1757	0/0:28,0:28:84.26:0,84,5874	0/0:21,0:20:57.20:0,57,4309	0/0:45,0:45:99:0,132,9754	0/0:24,0:24:60.21:0,60,4713	0/0:20,0:20:48.16:0,48,3956	0/0:28,0:28:75.25:0,75,6131	0/0:18,0:18:51.16:0,51,4205	0/0:22,0:22:66.22:0,66,4869	0/0:29,0:29:87.30:0,87,6722	0/0:12,0:12:36.12:0,36,2975
chr10	25273940	.	C	CA	194.17	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.451;DP=627;FS=21.174;HRun=4;HaplotypeScore=81.8839;InbreedingCoeff=0.9641;MQ=53.12;MQ0=10;MQRankSum=-3.197;QD=12.14;ReadPosRankSum=-0.108;VQSLOD=1.0496;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:54.15:0,54,612	0/0:11,0:11:24.07:0,24,272	0/0:24,0:11:30.08:0,30,340	0/0:23,0:14:39.03:0,39,410	0/0:38,0:38:99:0,99,1104	0/0:22,0:21:39.11:0,39,442	0/0:8,0:8:21.06:0,21,238	0/0:27,0:24:57.16:0,57,647	0/0:13,0:13:27.08:0,27,306	0/0:31,0:30:75.20:0,75,842	0/0:29,0:29:78.21:0,78,874	0/0:17,0:17:30:0,30,340	0/0:17,0:17:42.12:0,42,476	0/0:22,0:22:36.10:0,36,407	1/1:3,13:11:20.76:286,21,0	0/0:13,0:13:21.06:0,21,238	0/0:33,0:33:46.66:0,47,816	0/0:15,0:15:39.11:0,39,442	0/0:15,0:8:18.05:0,18,204	0/0:51,0:51:99:0,144,1623	0/0:8,0:8:21.06:0,21,238	0/0:29,0:29:87.23:0,87,976	0/0:27,0:27:69.18:0,69,771	0/0:21,0:21:48.14:0,48,544	0/0:21,0:21:57.16:0,57,646	0/0:25,0:25:72.21:0,72,817	0/0:36,0:34:75.21:0,75,849	0/0:7,0:7:18.05:0,18,204
chr10	25274283	.	A	AG	725.17	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-4.258;DP=623;FS=4.488;HRun=2;HaplotypeScore=59.2263;InbreedingCoeff=0.9841;MQ=63.99;MQ0=1;MQRankSum=2.178;QD=30.22;ReadPosRankSum=1.057;VQSLOD=3.1197;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:87.20:0,87,1046	0/0:7,0:7:21.07:0,21,260	0/0:27,0:25:69.20:0,69,837	0/0:20,0:18:48.15:0,48,585	0/0:29,0:29:78.25:0,78,966	0/0:18,0:18:54.17:0,54,669	0/0:9,0:9:18.05:0,18,212	0/0:33,0:33:87.25:0,87,1050	0/0:20,0:20:57.17:0,57,694	0/0:23,0:23:66.21:0,66,818	0/0:27,0:27:72.21:0,72,879	0/0:17,0:17:48.15:0,48,595	0/0:23,0:23:66.17:0,66,781	0/0:15,0:15:39.11:0,39,473	1/1:1,23:24:57.19:820,57,0	0/0:19,0:19:54.16:0,54,657	0/0:40,0:40:99:0,108,1338	0/0:20,0:20:57.16:0,57,705	0/0:19,0:19:57.18:0,57,706	0/0:33,0:33:96.30:0,96,1190	0/0:36,0:36:99:0,102,1249	0/0:25,0:25:66.21:0,66,818	0/0:21,0:21:63.20:0,63,779	0/0:17,0:17:48.11:0,48,577	0/0:21,0:21:60.18:0,60,732	0/0:18,0:18:51.15:0,51,622	0/0:24,0:24:72.20:0,72,867	0/0:7,0:7:21.05:0,21,247
chr10	25274604	.	GTT	G	443.85	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.063;DP=704;FS=0.000;HRun=2;HaplotypeScore=79.5268;InbreedingCoeff=0.9898;MQ=54.00;MQ0=11;MQRankSum=3.058;QD=36.99;ReadPosRankSum=2.223;VQSLOD=3.7972;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,120,2424	0/0:10,0:10:27.09:0,27,547	0/0:20,0:10:27.09:0,27,549	0/0:17,0:6:18.06:0,18,354	0/0:36,0:36:99:0,102,1938	0/0:31,0:31:93.32:0,93,1859	0/0:19,0:19:57.15:0,57,1073	0/0:39,0:30:90.29:0,90,1778	0/0:31,0:31:93.32:0,93,1890	0/0:24,0:24:72.25:0,72,1444	0/0:24,0:24:63.04:0,63,1115	0/0:21,0:21:63.22:0,63,1260	0/0:23,0:23:69.24:0,69,1402	0/0:24,0:24:72.25:0,72,1463	1/1:0,12:12:33.11:538,33,0	0/0:19,0:19:57.20:0,57,1159	0/0:23,0:23:66.18:0,66,1299	0/0:34,0:33:93.30:0,93,1849	0/0:20,0:12:39.13:0,39,772	0/0:23,0:23:66.15:0,66,1228	0/0:18,0:18:54.19:0,54,1097	0/0:34,0:34:99:0,99,1909	0/0:29,0:29:84.20:0,84,1613	0/0:31,0:31:81.28:0,81,1634	0/0:29,0:29:78.22:0,78,1542	0/0:25,0:24:72.25:0,72,1443	0/0:31,0:30:90.30:0,90,1782	0/0:16,0:16:48.16:0,48,975
chr10	25275339	.	C	CT	467.02	PASS	AB=0.932;AC=4;AF=0.071;AN=56;BaseQRankSum=6.432;DP=625;FS=2.057;HRun=0;HaplotypeScore=75.9702;InbreedingCoeff=0.4997;MQ=57.72;MQ0=0;MQRankSum=-1.989;QD=7.66;ReadPosRankSum=-2.691;VQSLOD=3.0903;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:54.18:0,54,754	0/0:9,0:9:24.05:0,24,314	0/0:25,0:25:74.22:0,74,930	0/0:19,0:18:26.61:0,27,646	0/0:22,0:22:63.19:0,63,859	0/0:24,0:24:69.23:0,69,963	0/0:13,0:13:36.11:0,36,487	0/0:37,0:36:99:0,105,1454	0/0:27,0:27:81.27:0,81,1132	0/0:33,0:33:96.31:0,96,1314	0/0:23,0:23:60.20:0,60,838	0/0:17,0:17:51.17:0,51,713	0/0:25,0:25:72.21:0,72,985	0/0:24,0:24:72.20:0,72,981	1/1:2,17:19:36.12:557,36,0	0/0:20,0:19:57.19:0,57,796	0/0:24,0:24:72.20:0,72,982	0/1:27,2:29:6.30:6,0,1043	0/0:13,0:13:39.11:0,39,526	0/0:37,0:37:99:0,102,1401	0/1:12,1:13:11.47:11,0,424	0/0:21,0:21:57.14:0,57,751	0/0:20,0:20:57.10:0,57,752	0/0:20,0:20:57.15:0,57,796	0/0:24,0:24:66.22:0,66,903	0/0:29,0:29:84.27:0,84,1159	0/0:25,0:25:75.25:0,75,1047	0/0:12,0:12:33.11:0,33,461
chr10	25275362	.	G	GATTTAACAGAT	2024.50	PASS	AB=1.000;AC=4;AF=0.071;AN=56;BaseQRankSum=3.828;DP=642;FS=7.824;HRun=0;HaplotypeScore=198.4461;InbreedingCoeff=0.4567;MQ=57.07;MQ0=8;MQRankSum=-5.678;QD=28.12;ReadPosRankSum=-1.767;VQSLOD=1.8908;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:58.07:0,58,1800	0/0:9,0:9:27.09:0,27,889	0/0:38,0:33:77.61:0,78,1993	0/0:22,0:18:48.16:0,48,1470	0/0:16,0:16:39.13:0,39,1302	0/0:26,0:26:75.24:0,75,2400	0/0:15,0:15:30.96:0,31,1127	0/0:43,0:40:99:0,102,3027	0/0:28,0:28:81.28:0,81,2627	0/0:35,0:35:99:0,102,3266	0/0:26,0:26:78.23:0,78,2386	0/0:15,0:15:39.13:0,39,1305	0/0:27,0:27:69.22:0,69,2110	0/0:16,0:16:42.14:0,42,1382	1/1:7,15:22:39.13:1940,39,0	0/0:22,0:22:60.21:0,60,2053	0/1:25,0:25:99:159,0,1393	0/1:25,0:25:41.18:41,0,1819	0/0:17,0:15:42.13:0,42,1284	0/0:35,0:35:99:0,99,3298	0/0:15,0:15:39.13:0,39,1250	0/0:22,0:22:57.20:0,57,1859	0/0:14,0:14:42.14:0,42,1384	0/0:20,0:20:51.16:0,51,1599	0/0:24,0:24:54.19:0,54,1872	0/0:23,0:23:66.23:0,66,2226	0/0:32,0:32:93.31:0,93,3060	0/0:6,0:6:15.05:0,15,500
chr10	25276115	.	AG	A	7394.48	PASS	AB=1.000;AC=55;AF=0.982;AN=56;BaseQRankSum=3.577;DP=516;FS=14.058;HRun=5;HaplotypeScore=97.2168;InbreedingCoeff=-0.0110;MQ=67.78;MQ0=0;MQRankSum=-1.173;QD=14.33;ReadPosRankSum=3.896;VQSLOD=3.3004;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:25:67.14:394,67,0	1/1:13,0:13:17.86:173,18,0	1/1:6,0:6:10.67:46,11,0	0/1:4,0:4:3.81:26,0,4	1/1:2,16:18:38.78:298,39,0	1/1:15,0:15:33.91:213,34,0	1/1:12,0:12:31.84:173,32,0	1/1:5,43:48:98.63:690,99,0	1/1:15,0:15:32.08:188,32,0	1/1:25,0:25:65.17:346,65,0	1/1:16,0:16:43.67:246,44,0	1/1:15,0:15:43.60:253,44,0	1/1:13,0:13:34.92:197,35,0	1/1:28,0:28:45.32:367,45,0	1/1:31,0:31:72.73:415,73,0	1/1:19,0:19:26.75:270,27,0	1/1:19,0:19:52.51:305,53,0	1/1:8,0:8:17.52:101,18,0	1/1:22,0:22:57.33:302,57,0	1/1:22,0:22:52.50:301,52,0	1/1:7,0:7:20.30:111,20,0	1/1:20,0:20:52.59:317,53,0	1/1:23,0:23:55.45:323,55,0	1/1:11,0:11:31.87:174,32,0	1/1:18,0:18:38.03:229,38,0	1/1:35,0:35:89.18:468,89,0	1/1:18,0:18:48.68:297,49,0	1/1:10,0:10:29.13:174,29,0
chr10	25276195	.	T	TTG	971.30	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-0.877;DP=672;FS=10.642;HRun=0;HaplotypeScore=107.0430;InbreedingCoeff=0.9738;MQ=60.02;MQ0=5;MQRankSum=-0.533;QD=31.33;ReadPosRankSum=-0.316;VQSLOD=4.9820;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,120,1496	0/0:6,0:6:15.05:0,15,190	0/0:35,0:20:46:0,46,542	0/0:30,0:16:32.27:0,32,375	0/0:33,0:33:84.27:0,84,1069	0/0:17,0:17:36.10:0,36,445	0/0:15,0:15:36.12:0,36,458	0/0:24,0:24:63.17:0,63,767	0/0:17,0:17:39.12:0,39,496	0/0:25,0:25:63.19:0,63,791	0/0:13,0:13:30.10:0,30,382	0/0:23,0:23:60.19:0,60,763	0/0:28,0:28:75.24:0,75,948	0/0:22,0:22:51.16:0,51,648	1/1:9,22:31:66.21:1066,66,0	0/0:20,0:20:45.13:0,45,560	0/0:24,0:24:27.38:0,27,551	0/0:10,0:10:30.05:0,30,363	0/0:24,0:21:45.14:0,45,573	0/0:24,0:24:60.19:0,60,763	0/0:48,0:46:99:0,117,1489	0/0:23,0:23:63.20:0,63,802	0/0:19,0:19:42.12:0,42,520	0/0:24,0:24:54.16:0,54,688	0/0:33,0:32:69.18:0,69,878	0/0:35,0:35:90.25:0,90,1105	0/0:11,0:11:30.10:0,30,381	0/0:7,0:7:18.06:0,18,229
chr10	25276317	.	C	CGTGTGTGTGT	6832.28	PASS	AB=0.880;AC=47;AF=0.870;AN=54;BaseQRankSum=-1.334;DP=694;FS=4.362;HRun=0;HaplotypeScore=230.2354;InbreedingCoeff=0.4555;MQ=45.13;MQ0=8;MQRankSum=-1.010;QD=10.73;ReadPosRankSum=3.279;VQSLOD=3.6280;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:47,1:48:20.33:377,20,0	./.	0/1:18,0:10:0:0,0,0	0/1:28,0:13:0:0,0,0	0/0:5,0:15:0.94:0,1,2	1/1:17,0:16:3:25,3,0	1/1:22,0:22:3.57:100,4,0	0/0:33,0:33:11.87:0,12,269	1/1:30,0:32:19.78:322,20,0	1/1:34,0:34:56.99:1098,57,0	1/1:15,0:14:6.02:113,6,0	1/1:34,1:34:12:195,12,0	1/1:30,1:31:34.67:583,35,0	1/1:28,0:28:8.44:192,8,0	1/1:24,0:24:5.92:95,6,0	1/1:17,1:18:18.86:396,19,0	1/1:21,0:23:20.10:338,20,0	1/1:11,0:11:6.02:210,6,0	1/1:24,0:21:38.79:721,39,0	1/1:22,0:22:15:220,15,0	1/1:68,0:64:9.96:188,10,0	1/1:24,0:23:3.01:67,3,0	1/1:14,0:13:2.79:23,3,0	1/1:23,0:23:6.45:71,6,0	0/1:11,13:24:0:0,0,0	1/1:26,0:26:46.59:819,47,0	1/1:13,0:12:16.61:290,17,0	1/1:11,0:8:16.43:388,16,0
chr10	25276746	.	GC	G	702.48	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.421;DP=837;FS=10.216;HRun=2;HaplotypeScore=77.0249;InbreedingCoeff=0.9997;MQ=55.29;MQ0=36;MQRankSum=-0.547;QD=25.09;ReadPosRankSum=-2.073;VQSLOD=1.9440;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:58:99:0,171,2503	0/0:13,0:13:39.13:0,39,584	0/0:41,0:15:35.25:0,35,503	0/0:30,0:17:38.31:0,38,594	0/0:25,0:25:75.25:0,75,1123	0/0:29,0:29:81.26:0,81,1180	0/0:24,0:23:69.13:0,69,952	0/0:30,0:25:75.23:0,75,1069	0/0:36,0:36:99:0,102,1524	0/0:39,0:39:99:0,117,1713	0/0:24,0:24:72.23:0,72,1058	0/0:22,0:22:63.18:0,63,883	0/0:35,0:35:99:0,99,1475	0/0:27,0:27:72.24:0,72,1077	1/1:0,28:28:63.17:797,63,0	0/0:20,0:20:60.20:0,60,898	0/0:30,0:30:87.23:0,87,1238	0/0:23,0:23:66.22:0,66,988	0/0:26,0:17:51.15:0,51,724	0/0:28,0:28:84.22:0,84,1228	0/0:57,0:57:99:0,157,2316	0/0:35,0:35:99:0,105,1499	0/0:24,0:24:69.15:0,69,1005	0/0:24,0:23:50.37:0,50,1011	0/0:27,0:27:78.12:0,78,1099	0/0:34,0:34:99:0,102,1525	0/0:29,0:29:87.29:0,87,1296	0/0:19,0:18:54.18:0,54,808
chr10	25281010	.	T	TA	222.50	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-3.032;DP=581;FS=0.000;HRun=5;HaplotypeScore=59.2090;InbreedingCoeff=0.8713;MQ=78.07;MQ0=0;MQRankSum=-2.171;QD=17.12;ReadPosRankSum=1.748;VQSLOD=2.9372;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,12:13:24.08:316,24,0	0/0:4,0:4:12.03:0,12,129	0/0:20,0:20:43.74:0,44,426	0/0:17,0:16:20.95:0,21,204	0/0:36,0:36:99:0,99,1051	0/0:30,0:30:90.22:0,90,959	0/0:15,0:15:39.08:0,39,410	0/0:24,0:23:57.10:0,57,585	0/0:26,0:26:72.18:0,72,774	0/0:25,0:25:60.14:0,60,640	0/0:27,0:27:75.19:0,75,805	0/0:19,0:19:54.12:0,54,572	0/0:35,0:35:96.24:0,96,1031	0/0:15,0:15:39.08:0,39,411	0/0:18,0:18:50.15:0,50,515	0/0:19,0:19:48.11:0,48,509	0/0:17,0:17:48.09:0,48,498	0/0:8,0:8:20.92:0,21,188	0/0:15,0:15:36.06:0,36,377	0/0:33,0:33:90.13:0,90,946	0/0:21,0:21:63.15:0,63,670	0/0:26,0:26:75.15:0,75,778	0/0:19,0:19:48.12:0,48,516	0/0:12,0:12:30.07:0,30,322	0/0:21,0:21:63.16:0,63,677	0/0:25,0:25:66.16:0,66,709	0/0:38,0:36:99:0,102,1089	0/0:2,0:2:6.02:0,6,64
chr10	25281687	.	T	TAA	1146.24	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.283;DP=614;FS=2.690;HRun=7;HaplotypeScore=91.8681;InbreedingCoeff=0.9929;MQ=82.99;MQ0=0;MQRankSum=-1.424;QD=23.39;ReadPosRankSum=0.737;VQSLOD=2.6017;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,0:23:49.91:176,50,0	0/0:9,0:9:27.08:0,27,315	0/0:18,0:18:30.08:0,30,347	0/0:16,0:17:16.78:0,17,350	0/0:23,0:23:63.17:0,63,724	0/0:28,0:28:78.20:0,78,886	0/0:18,0:18:51.11:0,51,572	0/0:37,0:37:99:0,99,1144	0/0:26,0:26:63.15:0,63,723	0/0:27,0:27:75.21:0,75,873	0/0:28,0:28:78.22:0,78,908	0/0:19,0:19:57.11:0,57,621	0/0:24,0:24:69.20:0,69,804	0/0:23,0:23:63.18:0,63,734	1/1:1,24:25:68.63:1092,69,0	0/0:13,0:13:39.10:0,39,444	0/0:16,0:16:48.14:0,48,559	0/0:13,0:13:33.10:0,33,384	0/0:28,0:28:69.18:0,69,804	0/0:33,0:33:90.22:0,90,1033	0/0:14,0:14:36.10:0,36,419	0/0:23,0:23:63.18:0,63,734	0/0:27,0:27:72.20:0,72,839	0/0:12,0:12:27.06:0,27,304	0/0:16,0:16:45.11:0,45,515	0/0:26,0:26:72.19:0,72,829	0/0:35,0:35:99:0,99,1153	0/0:12,0:12:36.11:0,36,419
chr10	25286383	.	A	AAGAG	2222.02	PASS	AB=0.815;AC=44;AF=0.846;AN=52;BaseQRankSum=-2.332;DP=500;FS=6.006;HRun=0;HaplotypeScore=107.2911;InbreedingCoeff=0.1187;MQ=58.19;MQ0=9;MQRankSum=0.875;QD=5.35;ReadPosRankSum=2.312;VQSLOD=1.4277;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:16:11.70:80,12,0	1/1:8,0:11:3.01:50,3,0	0/0:25,0:13:0:0,0,0	./.	0/1:17,0:26:1.81:2,0,2	1/1:14,0:13:3.01:67,3,0	1/1:16,0:16:12.03:196,12,0	0/1:29,0:29:0:0,0,0	0/1:11,9:21:37.80:64,0,38	1/1:26,0:26:22.86:340,23,0	1/1:17,0:22:3.01:38,3,0	1/1:14,0:14:12.01:239,12,0	1/1:21,0:21:5.94:42,6,0	1/1:17,0:17:6.02:77,6,0	0/1:17,2:21:26.80:64,0,27	1/1:12,0:13:15.04:262,15,0	1/1:7,0:9:5.65:28,6,0	1/1:6,0:7:4.96:19,5,0	1/1:9,0:7:3.48:68,3,0	0/0:18,0:22:1.83:0,2,4	1/1:6,10:18:3.01:70,3,0	1/1:14,0:16:1.51:5,2,0	./.	1/1:15,0:21:5.74:82,6,0	1/1:14,0:14:3.01:67,3,0	1/1:17,0:17:16.54:194,17,0	1/1:21,0:22:15.02:201,15,0	1/1:13,0:12:3.01:65,3,0
chr10	25286921	.	C	CT	975.93	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-0.975;DP=507;FS=10.389;HRun=7;HaplotypeScore=65.8390;InbreedingCoeff=0.9520;MQ=85.06;MQ0=0;MQRankSum=-1.805;QD=28.70;ReadPosRankSum=-1.344;VQSLOD=3.3604;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,32:34:90.23:1071,90,0	0/0:10,0:10:24.04:0,24,232	0/0:18,0:18:48.01:0,48,444	0/0:14,0:15:20.03:0,20,277	0/0:38,0:38:99:0,114,1095	0/0:26,0:26:72.10:0,72,690	0/0:12,0:12:36.05:0,36,342	0/0:29,0:29:75.11:0,75,724	0/0:19,0:19:51.08:0,51,492	0/0:28,0:28:72.11:0,72,695	0/0:26,0:26:75.12:0,75,724	0/0:11,0:11:30.05:0,30,290	0/0:10,0:10:24.03:0,24,231	0/0:12,0:12:36.06:0,36,348	0/0:16,0:16:45.06:0,45,429	0/0:17,0:17:45.07:0,45,435	0/0:15,0:15:32.98:0,33,299	0/0:7,0:6:18.03:0,18,174	0/0:22,0:22:54.07:0,54,517	0/0:21,0:21:60.10:0,60,579	0/0:5,0:5:12.02:0,12,116	0/0:14,0:14:42.07:0,42,406	0/0:24,0:24:63.09:0,63,608	0/0:11,0:11:27.04:0,27,261	0/0:17,0:17:51.07:0,51,487	0/0:21,0:21:60.08:0,60,575	0/0:18,0:18:51.08:0,51,493	0/0:11,0:11:33.05:0,33,319
chr10	25289489	.	A	AT	21901.29	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=1.326;DP=580;FS=11.182;HRun=0;HaplotypeScore=75.3440;InbreedingCoeff=0.9968;MQ=71.94;MQ0=0;MQRankSum=-2.520;QD=43.37;ReadPosRankSum=7.519;VQSLOD=3.6083;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,20:20:51.17:787,51,0	1/1:0,6:6:18.06:282,18,0	0/0:17,0:17:45.13:0,45,592	0/0:18,0:18:51.11:0,51,663	1/1:0,27:27:72.24:1116,72,0	1/1:0,23:23:66.22:1032,66,0	1/1:1,17:18:51.17:798,51,0	0/0:40,0:40:99:0,120,1606	1/1:0,17:17:45.15:704,45,0	1/1:0,24:24:72.25:1127,72,0	1/1:2,21:23:63.21:976,63,0	1/1:0,18:18:54.18:845,54,0	1/1:0,22:21:54.18:843,54,0	1/1:1,17:18:48.16:750,48,0	1/1:1,23:24:69.23:1079,69,0	1/1:0,19:19:54.18:845,54,0	1/1:0,16:16:48.16:750,48,0	1/1:0,24:24:63.21:985,63,0	1/1:1,19:20:57.11:780,57,0	1/1:0,19:19:54.18:845,54,0	1/1:0,14:14:42.14:657,42,0	1/1:0,22:22:63.13:956,63,0	1/1:0,19:19:57.19:892,57,0	1/1:0,11:12:33.11:516,33,0	1/1:0,20:20:48.16:751,48,0	1/1:0,34:34:99:1569,102,0	1/1:1,35:36:99:1548,99,0	1/1:0,10:10:30.10:469,30,0
chr10	25290005	.	G	GA	16822.29	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-10.480;DP=689;FS=9.966;HRun=8;HaplotypeScore=66.1807;InbreedingCoeff=0.9904;MQ=62.17;MQ0=0;MQRankSum=-1.776;QD=28.04;ReadPosRankSum=5.556;VQSLOD=4.6205;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:50.98:0,51,459	1/1:4,8:12:27.08:309,27,0	0/0:18,0:17:35.84:0,36,313	0/0:20,0:19:45.48:0,45,408	1/1:3,32:35:87.26:1004,87,0	1/1:4,18:23:47.97:534,48,0	1/1:3,23:26:66.20:762,66,0	0/0:28,1:29:49.42:0,49,706	1/1:2,21:23:60.18:692,60,0	1/1:8,18:26:56.99:628,57,0	1/1:3,16:19:14.66:423,15,0	1/1:2,23:25:63.18:718,63,0	1/1:0,20:20:60.18:693,60,0	1/1:2,26:28:69.21:796,69,0	1/1:6,33:39:87.26:1004,87,0	1/1:4,27:31:78.23:894,78,0	1/1:2,13:15:33.10:381,33,0	1/1:2,17:19:45.10:505,45,0	1/1:1,16:19:47.79:503,48,0	1/1:2,32:34:90.06:954,90,0	1/1:2,30:32:87.26:1004,87,0	1/1:2,32:34:93.23:1058,93,0	1/1:4,21:25:53.94:614,54,0	1/1:4,18:22:48.14:554,48,0	1/1:2,25:27:73.46:834,73,0	1/1:4,26:30:81.21:919,81,0	1/1:4,27:30:75.22:865,75,0	1/1:0,5:5:15.04:173,15,0
chr10	25291272	.	GTCATAAA	G	20053.30	PASS	AC=48;AF=0.889;AN=54;BaseQRankSum=7.004;DP=468;FS=29.507;HRun=0;HaplotypeScore=143.1411;InbreedingCoeff=0.9336;MQ=70.42;MQ0=2;MQRankSum=-11.422;QD=51.29;ReadPosRankSum=6.107;VQSLOD=2.6178;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,20:24:45.15:1053,45,0	1/1:2,7:9:15.05:369,15,0	0/0:26,0:25:62.42:0,62,1952	0/0:20,0:17:36:0,36,1126	1/1:0,25:25:57.19:1312,57,0	1/1:3,18:21:45.15:1082,45,0	1/1:7,14:21:33.11:815,33,0	0/0:26,0:26:63.20:0,63,2262	1/1:1,15:16:36.12:892,36,0	1/1:2,17:19:51.18:1242,51,0	1/1:0,13:13:30.10:740,30,0	1/1:2,12:14:30.10:742,30,0	1/1:1,13:14:38.88:959,39,0	1/1:2,12:14:33.11:818,33,0	1/1:4,16:20:42.14:1025,42,0	1/1:2,9:11:24.08:595,24,0	1/1:2,7:9:18.06:419,18,0	1/1:3,5:8:6.02:149,6,0	1/1:6,14:19:39.11:797,39,0	1/1:3,12:15:36.12:853,36,0	./.	1/1:1,19:19:51.18:1228,51,0	1/1:3,18:21:42.12:1022,42,0	1/1:3,7:10:9.03:223,9,0	1/1:2,20:22:51.18:1264,51,0	1/1:4,16:20:45.15:1115,45,0	1/1:3,14:17:33.11:818,33,0	1/1:0,8:8:21.07:520,21,0
chr10	25293123	.	G	GAA	5013.04	PASS	AB=0.959;AC=38;AF=0.679;AN=56;BaseQRankSum=4.105;DP=488;FS=8.882;HRun=1;HaplotypeScore=70.4109;InbreedingCoeff=0.1556;MQ=57.61;MQ0=24;MQRankSum=4.770;QD=13.16;ReadPosRankSum=3.187;VQSLOD=1.5628;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:26:44.94:0,45,371	1/1:10,0:10:21.38:171,21,0	0/0:21,0:15:31.43:0,31,297	0/0:24,0:16:9.09:0,9,154	1/1:13,0:12:17.34:182,17,0	1/1:15,0:13:14.64:226,15,0	1/1:15,0:11:21:187,21,0	0/0:35,0:35:99:0,100,775	1/1:16,0:16:29.10:248,29,0	0/1:20,0:18:33.37:266,0,33	1/1:18,0:17:31.55:284,32,0	0/1:16,0:15:11.77:169,0,12	1/1:14,0:13:5.26:178,5,0	0/1:6,13:19:13.20:13,0,18	1/1:15,0:15:38.11:319,38,0	1/1:14,0:13:4.34:234,4,0	0/1:18,0:17:56.98:226,0,57	0/1:12,0:11:24.68:76,0,25	0/1:21,0:18:99:210,0,103	1/1:18,0:18:32.81:281,33,0	0/1:13,0:13:8.03:77,0,8	1/1:14,0:13:27.63:243,28,0	1/1:13,0:13:25.54:212,26,0	1/1:16,0:15:30.79:275,31,0	1/1:21,0:20:46.56:437,47,0	0/1:24,0:21:24.82:304,0,25	0/1:13,0:13:15.55:153,0,16	0/1:13,0:8:39.34:42,0,39
chr10	25293523	.	TG	T	17994.10	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=4.223;DP=598;FS=17.404;HRun=1;HaplotypeScore=65.3013;InbreedingCoeff=0.9950;MQ=79.82;MQ0=0;MQRankSum=-7.154;QD=39.20;ReadPosRankSum=6.745;VQSLOD=2.8922;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,157,2481	1/1:0,6:6:15.05:210,15,0	0/0:28,0:28:84.20:0,84,1237	0/0:28,0:28:66.34:0,66,1144	1/1:0,15:15:39.09:523,39,0	1/1:0,20:20:57.19:797,57,0	1/1:0,19:19:54.18:755,54,0	0/0:31,0:31:93.28:0,93,1392	1/1:0,23:23:66.22:923,66,0	1/1:0,18:18:54.18:755,54,0	1/1:0,16:16:39.13:545,39,0	1/1:0,19:19:51.17:713,51,0	1/1:0,23:23:63.21:881,63,0	1/1:0,16:16:42.14:587,42,0	1/1:0,27:27:81.27:1133,81,0	1/1:0,24:24:66.22:923,66,0	1/1:0,32:32:84.28:1175,84,0	1/1:0,12:12:36.12:503,36,0	1/1:0,24:24:72.23:987,72,0	1/1:0,15:15:45.12:607,45,0	1/1:0,28:28:81.27:1133,81,0	1/1:0,9:9:27.05:355,27,0	1/1:0,13:13:36.07:480,36,0	1/1:0,32:32:90.30:1258,90,0	1/1:0,12:12:36.12:503,36,0	1/1:0,24:24:72.22:989,72,0	1/1:0,21:21:60.20:839,60,0	1/1:0,11:11:30.06:419,30,0
chr10	25294488	.	G	GTGTGTGTGTT	5264.13	PASS	AB=1.000;AC=25;AF=0.446;AN=56;BaseQRankSum=9.098;DP=459;FS=44.541;HRun=0;HaplotypeScore=175.7648;InbreedingCoeff=-0.5646;MQ=54.93;MQ0=6;MQRankSum=-7.815;QD=14.70;ReadPosRankSum=-0.457;VQSLOD=2.6811;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:6,10:23:12.04:471,12,0	0/1:8,0:8:33.89:321,0,34	0/0:22,0:12:35.88:0,36,356	0/0:22,0:17:47.93:0,48,499	0/1:21,0:20:70.50:70,0,113	0/1:23,0:21:99:330,0,136	0/1:26,0:25:90.69:326,0,91	0/0:32,0:31:79.17:0,79,1170	0/1:12,0:12:17.09:17,0,115	0/1:14,0:14:99:222,0,114	0/1:25,0:25:99:126,0,154	0/1:13,0:13:39.91:104,0,40	0/1:15,0:15:52.81:535,0,53	0/0:10,0:9:5.87:0,6,48	0/1:16,0:16:99:208,0,117	0/1:14,0:14:80.81:207,0,81	0/1:16,0:15:55.82:452,0,56	0/1:10,0:10:48.89:118,0,49	0/1:8,0:8:81.76:306,0,82	0/1:10,0:10:90.78:96,0,91	0/1:8,0:7:26.39:26,0,84	1/1:5,0:5:2.56:50,3,0	0/1:13,0:12:89.80:144,0,90	0/0:15,0:15:17.88:0,18,146	0/1:23,0:21:78.29:232,0,78	0/1:19,0:19:99:676,0,104	0/1:21,0:21:99:147,0,216	0/1:15,0:15:79.50:79,0,197
chr10	25296855	.	T	TAC	22779.94	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=-15.084;DP=648;FS=13.553;HRun=0;HaplotypeScore=61.4281;InbreedingCoeff=0.9997;MQ=81.75;MQ0=2;MQRankSum=-3.844;QD=46.87;ReadPosRankSum=6.932;VQSLOD=5.3032;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:36.12:0,36,504	1/1:0,10:10:30.10:540,30,0	0/0:24,0:24:63.20:0,63,853	0/0:21,0:21:45.19:0,45,739	1/1:1,30:33:84.29:1513,84,0	1/1:1,26:26:72.25:1296,72,0	1/1:2,16:19:51.17:897,51,0	0/0:33,0:33:90.28:0,90,1215	1/1:2,12:14:33.11:594,33,0	1/1:0,30:30:90.29:1591,90,0	1/1:1,16:17:36.12:648,36,0	1/1:3,17:21:48.16:865,48,0	1/1:2,20:22:57.20:1025,57,0	1/1:3,21:24:51.17:917,51,0	0/0:21,0:20:63.21:0,63,881	1/1:2,14:16:36.12:648,36,0	0/0:24,0:24:69.21:0,69,947	0/0:24,0:24:66.19:0,66,897	1/1:4,24:28:78.25:1348,78,0	1/1:2,26:28:81.28:1459,81,0	1/1:1,18:19:54.19:973,54,0	1/1:2,18:19:51.17:918,51,0	1/1:1,25:26:75.26:1350,75,0	1/1:0,18:17:45.15:810,45,0	1/1:0,21:21:57.20:1027,57,0	1/1:2,37:39:99:1953,111,0	1/1:4,37:41:99:1869,105,0	1/1:3,10:13:30.10:540,30,0
chr10	25297314	.	TA	T	9329.40	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=9.764;DP=486;FS=0.000;HRun=7;HaplotypeScore=49.0101;InbreedingCoeff=0.9707;MQ=78.21;MQ0=0;MQRankSum=-0.188;QD=26.89;ReadPosRankSum=5.413;VQSLOD=4.8627;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:63.19:0,63,779	1/1:0,5:5:15.03:153,15,0	0/0:15,0:15:6.67:0,7,275	0/0:10,0:10:27.05:0,27,310	1/1:3,20:23:60.05:598,60,0	1/1:3,21:24:57.13:582,57,0	1/1:1,8:9:24.05:245,24,0	0/0:27,0:27:60.14:0,60,716	1/1:1,16:17:45.10:459,45,0	1/1:1,29:30:90.18:907,90,0	1/1:1,24:25:72.16:735,72,0	1/1:2,8:10:21.05:214,21,0	1/1:0,16:16:42.10:428,42,0	1/1:0,10:10:30.07:306,30,0	0/0:19,0:19:51.15:0,51,628	1/1:1,7:8:21.05:214,21,0	0/0:21,0:21:57.16:0,57,699	0/0:24,0:24:63.20:0,63,792	1/1:2,17:19:51.08:510,51,0	1/1:1,24:25:63.14:643,63,0	1/1:1,16:17:45.10:459,45,0	1/1:3,11:14:27.05:275,27,0	1/1:0,15:15:42.10:428,42,0	1/1:0,4:4:12.03:122,12,0	1/1:2,20:22:60.13:612,60,0	1/1:1,18:19:54.12:551,54,0	1/1:4,24:28:69.15:704,69,0	1/1:0,7:7:18.04:184,18,0
chr10	25297430	.	T	TA	357.20	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=-3.307;DP=496;FS=4.594;HRun=8;HaplotypeScore=52.2940;InbreedingCoeff=0.5495;MQ=76.37;MQ0=0;MQRankSum=-0.323;QD=12.32;ReadPosRankSum=0.720;VQSLOD=2.5111;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:69.03:0,69,631	0/0:10,0:10:24:0,24,220	0/0:9,0:9:2.71:0,3,81	0/1:13,0:12:7.97:8,0,145	0/0:17,0:17:45.02:0,45,412	0/0:23,0:23:66.04:0,66,604	0/0:6,0:6:18.01:0,18,165	0/0:26,0:26:59.98:0,60,538	0/0:16,0:16:33:0,33,302	0/0:26,1:27:40.41:0,40,622	0/0:28,0:28:75.04:0,75,686	0/0:8,0:8:24.01:0,24,220	0/0:21,0:21:60.01:0,60,544	0/0:10,0:10:27:0,27,242	1/1:2,14:16:39.12:450,39,0	0/0:8,0:8:18.01:0,18,165	0/0:18,0:18:48.02:0,48,439	0/0:34,0:34:78.08:0,78,704	0/0:25,0:25:50.97:0,51,458	0/0:31,0:31:78.01:0,78,709	0/0:8,0:8:20.99:0,21,187	0/0:19,0:19:54.03:0,54,494	0/0:18,0:18:51.01:0,51,461	0/0:10,0:10:26.94:0,27,234	0/0:14,0:14:42.02:0,42,384	0/0:31,0:31:84.02:0,84,765	0/0:22,0:22:66:0,66,594	0/0:2,0:2:6:0,6,55
chr10	25299511	.	C	CTT	1121.90	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=-2.650;DP=734;FS=0.000;HRun=8;HaplotypeScore=103.2538;InbreedingCoeff=0.6565;MQ=66.03;MQ0=1;MQRankSum=-0.429;QD=24.39;ReadPosRankSum=0.177;VQSLOD=2.8746;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,34:39:77.75:1194,78,0	0/0:15,0:15:33.06:0,33,368	0/0:11,0:10:16.95:0,17,148	0/1:6,0:6:15.09:34,0,15	0/0:30,0:30:84.22:0,84,936	0/0:31,0:31:84.20:0,84,926	0/0:14,0:14:33.07:0,33,368	0/0:39,0:39:99:0,99,1065	0/0:31,0:31:87.23:0,87,969	0/0:29,0:29:78.07:0,78,849	0/0:22,0:22:57.14:0,57,635	0/0:27,0:27:60.11:0,60,649	0/0:31,0:31:81.18:0,81,890	0/0:26,0:26:60.12:0,60,669	0/0:36,0:36:90.19:0,90,985	0/0:22,0:22:57.13:0,57,626	0/0:21,0:22:59.82:0,60,612	0/0:27,0:27:78.12:0,78,853	0/0:27,0:27:69.07:0,69,706	0/0:38,0:38:99:0,99,1101	0/0:40,0:40:99:0,111,1235	0/0:20,0:20:54.13:0,54,601	0/0:28,0:28:72.16:0,72,793	0/0:26,0:26:72.19:0,72,803	0/0:22,0:22:63.14:0,63,693	0/0:32,1:33:33.56:0,34,813	0/0:22,0:22:60.10:0,60,646	0/0:19,0:19:54.14:0,54,599
chr10	25300698	.	AAG	A	600.72	PASS	AB=0.970;AC=23;AF=0.605;AN=38;BaseQRankSum=1.170;DP=638;FS=8.897;HRun=0;HaplotypeScore=179.5786;InbreedingCoeff=0.1977;MQ=56.78;MQ0=6;MQRankSum=-1.679;QD=1.83;ReadPosRankSum=0.316;VQSLOD=1.4742;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:40,0:40:16.76:108,0,17	0/0:7,0:7:0.35:0,0,1	./.	./.	./.	1/1:19,0:19:2.49:9,2,0	./.	0/0:35,0:34:11.26:0,11,60	1/1:21,0:21:4.82:32,5,0	1/1:33,0:33:2.45:35,2,0	./.	1/1:19,0:19:12:102,12,0	1/1:22,0:22:6:52,6,0	1/1:27,0:26:2.27:24,2,0	1/1:19,7:26:8.91:88,9,0	0/1:18,0:18:5.01:95,0,5	1/1:21,0:21:1.37:75,1,0	0/1:12,0:14:7.34:47,0,7	0/1:20,0:19:15.40:17,0,15	./.	0/0:28,0:28:4.23:0,4,26	./.	./.	0/1:18,0:18:0:0,0,0	0/0:18,0:17:2.99:0,3,23	0/0:36,0:36:8.23:0,8,62	1/1:29,0:28:5.89:40,6,0	./.
chr10	25300727	.	AGAGAGAGAGAGAGAGAGAGG	A	6752.59	PASS	AB=0.766;AC=40;AF=0.769;AN=52;BaseQRankSum=8.764;DP=582;FS=1.735;HRun=0;HaplotypeScore=301.2246;InbreedingCoeff=0.6241;MQ=44.21;MQ0=16;MQRankSum=1.490;QD=15.01;ReadPosRankSum=0.681;VQSLOD=3.4240;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:42:66.45:0,66,1272	1/1:8,0:7:12.02:206,12,0	./.	./.	1/1:23,0:23:15.01:187,15,0	1/1:26,0:26:29.29:350,29,0	1/1:19,0:14:2.99:24,3,0	0/0:26,0:24:56.14:0,56,589	1/1:22,0:22:29.73:426,30,0	1/1:6,25:29:14.08:766,14,0	1/1:25,2:27:20.77:196,21,0	1/1:15,2:17:38.90:838,39,0	1/1:4,15:19:5.32:284,5,0	1/1:22,1:23:30.07:520,30,0	0/0:28,0:28:27.22:0,27,373	1/1:19,0:19:33.08:740,33,0	0/1:21,0:20:29.63:30,0,1052	0/0:14,0:13:26.97:0,27,724	1/1:3,18:21:52.51:537,53,0	1/1:3,16:18:3.55:41,4,0	1/1:26,0:26:23.53:397,24,0	1/1:5,16:21:2.95:19,3,0	0/1:3,22:24:0:0,0,0	0/0:15,0:14:1.22:0,1,3	1/1:22,0:20:3.90:46,4,0	1/1:3,26:28:65.44:762,65,0	1/1:5,23:27:5.77:324,6,0	1/1:4,0:2:5.97:59,6,0
chr10	25300745	.	AGG	A	3742.69	PASS	AB=0.861;AC=43;AF=0.768;AN=56;BaseQRankSum=9.234;DP=548;FS=2.504;HRun=3;HaplotypeScore=173.7876;InbreedingCoeff=0.3762;MQ=43.97;MQ0=16;MQRankSum=1.527;QD=7.37;ReadPosRankSum=0.957;VQSLOD=0.3501;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:38,0:36:47.29:47,0,273	1/1:9,1:9:17.92:140,18,0	0/0:4,0:3:8.93:0,9,65	0/0:5,0:3:8.64:0,9,54	1/1:20,3:23:20.86:166,21,0	1/1:16,5:21:24.29:183,24,0	0/1:4,15:16:0:0,0,0	0/0:31,0:30:48.63:0,49,476	1/1:17,6:22:32.92:288,33,0	1/1:27,0:25:51.42:396,51,0	1/1:16,5:21:11.85:101,12,0	1/1:10,5:15:32.87:334,33,0	1/1:15,0:15:5.79:88,6,0	1/1:16,7:23:35.62:285,36,0	0/1:26,1:26:26.95:27,0,159	1/1:15,7:22:50.08:475,50,0	0/1:18,2:19:31.26:31,0,221	0/1:13,0:12:30.38:30,0,111	1/1:18,0:18:44.34:345,44,0	1/1:17,0:16:2.80:19,3,0	1/1:20,1:21:26.86:217,27,0	1/1:17,0:17:2.96:19,3,0	0/1:23,0:22:0:0,0,0	1/1:16,3:18:11.53:98,12,0	0/1:6,13:17:0:0,0,0	1/1:28,0:27:27.69:313,28,0	1/1:24,0:22:5.90:74,6,0	1/1:5,0:3:8.92:64,9,0
chr10	25300856	.	C	CAG	23840.99	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-11.353;DP=736;FS=3.795;HRun=0;HaplotypeScore=98.9013;InbreedingCoeff=0.9973;MQ=70.42;MQ0=5;MQRankSum=-4.009;QD=42.27;ReadPosRankSum=6.510;VQSLOD=6.6490;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,27:30:63.22:1131,63,0	1/1:1,9:10:20.98:360,21,0	0/0:37,0:35:40.91:0,41,830	0/0:38,0:35:69.56:0,70,925	1/1:2,29:31:75.24:1349,75,0	1/1:2,28:30:78.27:1402,78,0	1/1:2,22:24:51.17:918,51,0	0/0:46,0:46:99:0,120,1587	1/1:4,30:33:78.27:1401,78,0	1/1:1,32:33:93.23:1542,93,0	1/1:0,17:17:39.13:702,39,0	1/1:1,23:24:60.21:1078,60,0	1/1:1,22:23:60.21:1076,60,0	1/1:0,32:35:90.31:1611,90,0	0/0:25,0:25:57.19:0,57,797	1/1:1,19:20:45.15:808,45,0	0/0:19,0:19:48.16:0,48,671	0/0:7,0:7:21.05:0,21,272	1/1:1,18:21:60.18:1010,60,0	1/1:3,24:27:59.79:1047,60,0	1/1:4,21:25:53.95:972,54,0	1/1:3,29:32:75.26:1348,75,0	1/1:2,21:22:54.18:963,54,0	1/1:1,21:22:27.09:486,27,0	1/1:1,29:31:81.28:1458,81,0	1/1:3,36:37:99:1777,102,0	1/1:2,20:23:57.19:1025,57,0	1/1:3,7:10:21.07:377,21,0
chr10	25301604	.	CACAT	C	3040.10	PASS	AB=0.970;AC=30;AF=0.536;AN=56;BaseQRankSum=3.025;DP=476;FS=9.076;HRun=0;HaplotypeScore=144.2219;InbreedingCoeff=-0.0996;MQ=60.23;MQ0=7;MQRankSum=-0.862;QD=8.49;ReadPosRankSum=3.654;VQSLOD=2.3415;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:30:13.69:14,0,317	0/1:11,0:11:13.72:25,0,14	0/0:24,0:16:21.06:0,21,297	0/0:19,0:12:23.22:0,23,283	1/1:18,0:17:4.32:127,4,0	0/1:19,0:19:12.94:214,0,13	0/1:17,2:18:3.64:165,0,4	0/0:24,0:24:65.86:0,66,560	0/1:15,0:15:95.34:95,0,105	0/1:18,0:17:14.78:209,0,15	1/1:10,0:10:5.99:50,6,0	1/1:13,0:13:0.59:141,1,0	0/1:13,1:14:5.56:208,0,6	1/1:17,0:16:2.60:164,3,0	0/0:19,0:19:45.05:0,45,732	0/1:16,0:16:29.90:196,0,30	0/0:20,0:19:42.02:0,42,693	0/0:12,0:11:23.92:0,24,349	0/1:13,1:14:44.19:247,0,44	1/1:16,0:16:0.87:137,1,0	1/1:17,0:17:4.17:140,4,0	1/1:15,0:15:19.46:142,19,0	0/1:11,1:11:21.01:50,0,21	0/1:23,0:23:34.25:187,0,34	0/1:18,1:19:20.90:36,0,21	0/1:12,1:13:18.60:216,0,19	1/1:20,0:20:0.54:294,1,0	0/1:9,0:9:1.56:150,0,2
chr10	25301606	.	CAT	C	5676.73	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=10.596;DP=484;FS=7.846;HRun=0;HaplotypeScore=125.5081;InbreedingCoeff=0.9343;MQ=59.00;MQ0=9;MQRankSum=1.030;QD=17.05;ReadPosRankSum=1.662;VQSLOD=4.2883;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:33:2.79:0,3,263	1/1:11,0:11:11.70:82,12,0	0/0:24,0:16:21.14:0,21,298	0/0:18,0:11:23.22:0,23,283	1/1:14,2:15:16.77:124,17,0	1/1:19,0:19:49.17:400,49,0	1/1:18,0:16:25.46:193,25,0	0/0:24,0:24:68.61:0,69,572	1/1:17,0:17:40.89:344,41,0	1/1:17,2:18:47.86:439,48,0	1/1:10,0:10:9:94,9,0	1/1:13,0:13:29.84:230,30,0	1/1:11,3:14:32.40:292,32,0	1/1:16,1:16:47.74:435,48,0	0/0:19,0:19:13.72:0,14,463	1/1:14,3:17:41.76:383,42,0	0/0:20,0:19:41.78:0,42,506	0/0:12,0:11:22.27:0,22,221	1/1:14,1:15:26.03:323,26,0	1/1:14,3:17:32.84:247,33,0	1/1:16,1:17:29.87:241,30,0	1/1:16,0:16:20.92:183,21,0	1/1:14,0:13:14.68:99,15,0	1/1:20,3:23:56.56:563,57,0	1/1:18,0:18:14.95:119,15,0	1/1:13,0:13:38.02:287,38,0	1/1:17,3:20:49.97:401,50,0	1/1:7,2:9:22.45:199,22,0
chr10	25301608	.	TAC	T	598.66	PASS	AB=0.961;AC=22;AF=0.407;AN=54;BaseQRankSum=0.160;DP=491;FS=11.923;HRun=0;HaplotypeScore=142.9226;InbreedingCoeff=-0.1098;MQ=54.75;MQ0=10;MQRankSum=-0.687;QD=1.99;ReadPosRankSum=5.219;VQSLOD=1.3575;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:20,13:35:23.90:125,0,24	0/0:11,0:11:1.77:0,2,5	0/0:22,0:14:0:0,0,0	./.	0/0:20,0:19:3.26:0,3,11	0/1:20,0:20:23.75:24,0,25	0/0:18,0:16:5.85:0,6,20	0/0:23,0:23:2.97:0,3,20	0/1:18,0:18:13.65:14,0,68	1/1:19,0:18:0.12:73,0,0	1/1:9,0:9:3:26,3,0	0/0:13,0:13:3.99:0,4,11	0/1:14,0:14:1.49:49,0,1	1/1:16,0:15:7.09:71,7,0	0/1:16,4:20:63.57:64,0,256	0/1:17,0:17:10.46:46,0,10	0/0:12,0:19:30.03:0,30,341	0/1:10,0:13:0.57:1,0,81	0/1:14,0:14:19.24:19,0,43	0/1:16,0:16:31.86:32,0,33	0/1:18,0:18:6.14:6,0,7	1/1:16,0:16:2.98:21,3,0	0/0:13,0:12:4.23:0,4,15	1/1:23,0:23:1.74:111,2,0	0/0:19,0:19:4.47:0,4,11	0/0:15,0:14:2.65:0,3,32	0/1:21,0:21:24.96:25,0,27	0/1:9,0:9:6.25:32,0,6
chr10	25301652	.	C	CGT	8040.09	PASS	AB=1.000;AC=39;AF=0.750;AN=52;BaseQRankSum=5.660;DP=554;FS=4.230;HRun=0;HaplotypeScore=110.5328;InbreedingCoeff=0.7951;MQ=58.73;MQ0=28;MQRankSum=-0.825;QD=22.21;ReadPosRankSum=1.710;VQSLOD=5.3055;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:40:69.08:0,69,771	1/1:5,0:5:8.88:104,9,0	0/0:26,0:3:1.25:0,1,3	0/0:21,0:5:3.01:0,3,31	1/1:6,16:22:5.66:78,6,0	1/1:17,0:17:32.98:416,33,0	1/1:8,21:27:11.80:125,12,0	0/0:30,0:29:78.25:0,78,1004	1/1:18,1:19:44.93:523,45,0	1/1:8,17:24:57.11:809,57,0	./.	1/1:12,0:12:23.86:290,24,0	1/1:16,0:16:31.03:384,31,0	1/1:15,0:14:35.80:426,36,0	0/0:22,0:22:49.02:0,49,576	1/1:21,0:21:42.05:542,42,0	0/0:29,0:29:62.89:0,63,774	0/1:12,0:11:8.01:8,0,92	1/1:5,9:14:33.11:458,33,0	1/1:25,1:26:56.48:769,56,0	1/1:22,0:22:41.98:591,42,0	./.	1/1:18,0:17:20.97:230,21,0	1/1:26,0:26:50.58:576,51,0	1/1:21,1:22:27.08:394,27,0	1/1:4,16:19:47.95:665,48,0	1/1:10,2:12:29.04:360,29,0	1/1:9,0:9:23.65:292,24,0
chr10	25304373	.	GA	G	272.55	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=0.809;DP=645;FS=3.803;HRun=7;HaplotypeScore=83.3152;InbreedingCoeff=0.9618;MQ=78.24;MQ0=0;MQRankSum=-0.087;QD=18.17;ReadPosRankSum=-0.156;VQSLOD=3.4338;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,15:15:36.08:367,36,0	0/0:9,0:9:27.09:0,27,339	0/0:19,0:19:11.94:0,12,348	0/0:14,0:14:26.39:0,26,260	0/0:33,0:33:81.22:0,81,998	0/0:37,0:37:99:0,102,1270	0/0:24,0:24:69.22:0,69,868	0/0:32,0:32:87.27:0,87,1084	0/0:19,0:19:57.17:0,57,704	0/0:32,0:32:93.30:0,93,1170	0/0:20,0:20:48.15:0,48,604	0/0:22,0:22:60.18:0,60,742	0/0:24,0:24:63.20:0,63,789	0/0:20,0:20:57.18:0,57,717	0/0:32,0:32:87.27:0,87,1082	0/0:17,0:17:51.15:0,51,629	0/0:22,0:22:59.84:0,60,736	0/0:8,0:8:21.07:0,21,264	0/0:17,0:17:51.16:0,51,642	0/0:44,0:44:99:0,114,1354	0/0:21,0:21:60.18:0,60,742	0/0:31,0:31:72.19:0,72,888	0/0:25,0:25:63.16:0,63,774	0/0:17,0:17:51.16:0,51,642	0/0:22,0:21:60.19:0,60,754	0/0:28,0:28:78.24:0,78,970	0/0:33,0:32:93.30:0,93,1167	0/0:8,0:8:24.08:0,24,302
chr10	25306362	.	AT	A	899.06	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.228;DP=412;FS=0.000;HRun=5;HaplotypeScore=41.9617;InbreedingCoeff=0.9439;MQ=85.57;MQ0=0;MQRankSum=-0.421;QD=25.69;ReadPosRankSum=0.482;VQSLOD=2.1506;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,19:20:57.16:646,57,0	0/0:7,0:7:18.06:0,18,245	0/0:17,0:17:48.15:0,48,635	0/0:10,0:10:10.96:0,11,307	0/0:19,0:19:57.19:0,57,780	0/0:17,0:17:51.17:0,51,695	0/0:12,0:12:36.10:0,36,475	0/0:24,0:23:63.21:0,63,859	0/0:17,0:17:45.15:0,45,616	0/0:14,0:14:39.12:0,39,508	0/0:24,0:24:66.20:0,66,872	0/0:13,0:13:39.13:0,39,533	0/0:12,0:12:36.12:0,36,493	0/0:10,0:10:27.09:0,27,365	1/1:1,14:15:33.09:374,33,0	0/0:10,0:10:30.09:0,30,395	0/0:21,0:21:57.19:0,57,780	0/0:11,0:11:21.07:0,21,284	0/0:10,0:10:24.07:0,24,312	0/0:14,0:14:39.10:0,39,493	0/0:17,0:17:51.17:0,51,697	0/0:12,0:12:30.10:0,30,410	0/0:12,0:12:36.11:0,36,471	0/0:13,0:13:36.12:0,36,490	0/0:11,0:11:33.11:0,33,451	0/0:21,0:21:54.16:0,54,710	0/0:23,0:23:63.18:0,63,842	0/0:6,0:6:9.03:0,9,123
chr10	25306596	.	TA	T	5778.64	PASS	AB=0.786;AC=46;AF=0.821;AN=56;BaseQRankSum=3.379;DP=370;FS=1.857;HRun=10;HaplotypeScore=40.8535;InbreedingCoeff=0.7585;MQ=73.21;MQ0=4;MQRankSum=-0.293;QD=19.72;ReadPosRankSum=4.480;VQSLOD=5.2463;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:21.04:0,21,223	1/1:0,4:4:9:78,9,0	0/0:35,0:20:35.02:0,35,295	0/1:16,0:10:1.61:2,0,73	1/1:1,17:18:41.93:358,42,0	1/1:1,17:18:47.99:416,48,0	1/1:0,5:5:15:130,15,0	0/0:24,0:24:66.17:0,66,723	0/1:3,9:12:8.62:180,0,9	1/1:1,15:16:44.99:390,45,0	1/1:2,14:16:38.99:338,39,0	1/1:0,12:12:29.99:260,30,0	1/1:1,5:6:12:104,12,0	1/1:0,13:13:29.99:260,30,0	0/0:8,0:8:21.05:0,21,229	1/1:2,4:6:8.99:78,9,0	1/1:1,16:17:41.99:365,42,0	1/1:2,17:19:35.99:312,36,0	1/1:2,23:25:68.98:599,69,0	1/1:1,10:11:26.90:225,27,0	1/1:1,6:7:14.99:130,15,0	1/1:1,5:6:14.99:129,15,0	1/1:1,8:9:15:130,15,0	1/1:0,3:3:9:78,9,0	1/1:0,15:15:38.99:339,39,0	1/1:1,19:20:56.95:487,57,0	1/1:1,14:15:35.99:312,36,0	1/1:0,4:4:9:78,9,0
chr10	25306712	.	CAA	C	6725.36	PASS	AB=0.875;AC=43;AF=0.768;AN=56;BaseQRankSum=-1.425;DP=417;FS=11.711;HRun=11;HaplotypeScore=62.1431;InbreedingCoeff=0.8654;MQ=76.55;MQ0=0;MQRankSum=-3.624;QD=22.42;ReadPosRankSum=5.423;VQSLOD=2.8566;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:29.93:0,30,380	1/1:1,4:5:12.02:128,12,0	0/1:22,2:23:10.82:11,0,390	0/0:17,0:10:15.42:0,15,179	1/1:0,24:24:69.16:734,69,0	1/1:4,12:17:27.01:343,27,0	1/1:0,6:6:15.04:160,15,0	0/0:30,0:33:81.08:0,81,1112	1/1:0,10:10:27.07:287,27,0	1/1:4,9:13:27.06:287,27,0	1/1:2,13:15:33.05:344,33,0	1/1:2,11:13:24.05:255,24,0	1/1:0,8:8:21.05:223,21,0	1/1:2,12:15:27.04:342,27,0	0/0:2,0:18:34.93:0,35,120	1/1:3,16:19:20.59:423,21,0	0/0:2,0:27:54.08:0,54,512	0/0:5,0:8:18.02:0,18,183	1/1:2,19:22:59.84:599,60,0	1/1:0,13:13:39.10:414,39,0	1/1:0,6:6:18.05:192,18,0	1/1:0,9:9:24.05:255,24,0	1/1:4,8:12:21.03:223,21,0	1/1:0,8:8:12.03:128,12,0	1/1:3,12:15:30.07:319,30,0	1/1:1,19:21:59.87:611,60,0	1/1:4,14:18:35.95:383,36,0	1/1:1,2:3:6.01:64,6,0
chr10	25306824	.	AACAAAGGTTACAAAGGTC	A	15324.06	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=12.274;DP=308;FS=15.525;HRun=0;HaplotypeScore=184.6283;InbreedingCoeff=0.8549;MQ=83.37;MQ0=0;MQRankSum=-11.438;QD=78.99;ReadPosRankSum=3.789;VQSLOD=3.6863;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:69.23:0,69,5252	1/1:0,2:2:6.02:310,6,0	0/0:12,0:12:33.11:0,33,1747	0/0:14,0:14:36.12:0,36,2213	1/1:3,5:8:6.02:224,6,0	1/1:5,8:13:24.08:1153,24,0	1/1:3,6:9:18.06:602,18,0	0/0:23,0:23:69.24:0,69,4860	1/1:3,7:10:21.07:908,21,0	1/1:2,3:5:9.02:224,9,0	1/1:1,9:10:15.05:577,15,0	1/1:8,11:18:24.08:1215,24,0	1/1:3,8:11:30.10:1523,30,0	1/1:4,9:13:24.08:1156,24,0	0/0:18,0:18:54.17:0,54,4035	1/1:1,10:10:27.09:1393,27,0	0/0:16,0:16:42.13:0,42,2997	0/0:5,0:5:15.05:0,15,1311	1/1:3,5:8:12.04:619,12,0	1/1:4,6:10:18.06:672,18,0	1/1:4,4:8:9.03:263,9,0	1/1:0,2:2:6.02:228,6,0	1/1:0,13:12:30.10:1177,30,0	1/1:4,6:10:5.74:227,6,0	1/1:1,5:6:12.04:595,12,0	1/1:5,10:15:30.10:1330,30,0	1/1:3,7:10:15.05:774,15,0	1/1:0,1:1:3.01:155,3,0
chr10	25307116	.	A	ATAGT	19239.12	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=9.127;DP=463;FS=46.348;HRun=0;HaplotypeScore=138.7243;InbreedingCoeff=0.9397;MQ=71.35;MQ0=1;MQRankSum=-11.327;QD=62.67;ReadPosRankSum=3.669;VQSLOD=3.5984;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:75.26:0,75,1398	1/1:0,2:2:6.02:159,6,0	0/0:21,0:22:38.67:0,39,823	0/0:14,0:13:27.09:0,27,502	1/1:4,20:24:60.06:1406,60,0	1/1:5,14:19:54.19:1431,54,0	1/1:1,9:10:24.08:638,24,0	0/0:40,0:39:99:0,102,1864	1/1:2,8:10:21.07:556,21,0	1/1:3,14:17:48.14:1219,48,0	1/1:11,14:25:60.20:1533,60,0	1/1:5,10:15:36.12:955,36,0	1/1:5,9:14:39.12:935,39,0	1/1:1,7:8:21.07:554,21,0	0/0:22,0:22:63.22:0,63,1176	1/1:4,11:15:39.13:1035,39,0	0/0:23,0:23:56.71:0,57,1054	0/0:8,0:8:21.07:0,21,392	1/1:4,8:12:36.08:896,36,0	1/1:9,21:30:81.28:2137,81,0	1/1:4,5:9:15.05:398,15,0	1/1:4,12:16:42.14:1047,42,0	1/1:2,9:11:24.08:637,24,0	1/1:3,11:14:3.15:263,3,0	1/1:4,9:13:33.11:876,33,0	1/1:6,7:13:27.09:666,27,0	1/1:11,11:23:66.13:1579,66,0	1/1:6,1:7:12.04:320,12,0
chr10	25307140	.	C	CA	9881.89	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=15.293;DP=461;FS=36.385;HRun=3;HaplotypeScore=158.6314;InbreedingCoeff=0.9821;MQ=48.31;MQ0=1;MQRankSum=-13.703;QD=30.50;ReadPosRankSum=-0.857;VQSLOD=1.4719;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:81.25:0,81,994	1/1:2,2:4:11.80:117,12,0	0/0:14,0:13:18.24:0,18,248	0/0:9,0:7:21.07:0,21,257	1/1:2,15:17:44.13:468,44,0	1/1:6,17:23:65.60:759,66,0	1/1:1,12:13:35.58:404,36,0	0/0:34,0:33:82.54:0,83,1064	1/1:1,7:8:23.94:308,24,0	1/1:3,18:21:62.85:773,63,0	1/1:2,18:20:53.42:655,53,0	1/1:2,15:17:47.72:586,48,0	1/1:5,12:17:38.87:486,39,0	1/1:1,6:7:20.85:238,21,0	0/0:26,0:26:78.20:0,78,950	1/1:2,12:14:36.01:487,36,0	0/0:21,0:21:51.14:0,51,619	0/0:5,0:5:15.05:0,15,186	1/1:5,10:15:39.07:474,39,0	1/1:5,22:27:65.84:855,66,0	1/1:5,4:9:15.68:148,16,0	1/1:5,14:19:44.44:529,44,0	1/1:6,14:20:44.40:463,44,0	1/1:2,13:15:25.48:300,25,0	1/1:4,12:16:38.72:463,39,0	1/1:5,13:18:50.74:581,51,0	1/1:1,18:19:55.99:639,56,0	1/1:1,4:5:14.88:149,15,0
chr10	25307146	.	AC	A	4235.83	PASS	AB=0.841;AC=28;AF=0.500;AN=56;BaseQRankSum=9.537;DP=459;FS=16.081;HRun=1;HaplotypeScore=173.6581;InbreedingCoeff=-0.0041;MQ=43.99;MQ0=1;MQRankSum=-9.684;QD=12.80;ReadPosRankSum=3.321;VQSLOD=2.5565;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:78.16:0,78,1110	1/1:3,1:4:11.72:89,12,0	0/0:9,0:8:20.28:0,20,279	0/0:8,0:6:18.05:0,18,257	0/1:12,4:16:31.28:148,0,31	0/1:21,3:24:26.08:374,0,26	1/1:11,4:15:29.19:201,29,0	0/0:32,0:31:93.31:0,93,1405	0/1:7,1:8:13:112,0,13	1/1:18,5:23:60.58:429,61,0	0/1:15,5:20:8.96:199,0,9	0/1:15,4:19:65.42:214,0,65	0/1:13,6:19:8.84:358,0,9	0/1:8,0:8:12.76:109,0,13	0/0:27,0:27:81.22:0,81,1174	1/1:11,4:15:26.33:195,26,0	0/0:19,0:19:51.15:0,51,751	0/0:6,0:6:18.01:0,18,241	1/1:11,4:15:2.02:293,2,0	0/1:23,1:24:47.06:173,0,47	0/1:7,2:9:2.81:87,0,3	0/1:15,2:17:36.34:116,0,36	0/1:15,5:20:33.54:282,0,34	0/1:11,4:15:58.64:59,0,66	0/1:10,5:15:37.74:188,0,38	1/1:15,5:20:5.86:344,6,0	0/1:15,5:20:99:169,0,106	1/1:3,2:5:14.70:99,15,0
chr10	25307147	.	C	CAAA	13821.44	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=14.405;DP=464;FS=26.608;HRun=3;HaplotypeScore=164.4125;InbreedingCoeff=0.9610;MQ=45.85;MQ0=1;MQRankSum=-12.066;QD=41.38;ReadPosRankSum=-1.782;VQSLOD=2.2793;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:54.62:0,55,1012	1/1:2,2:4:12:197,12,0	0/0:9,0:8:15.02:0,15,239	0/0:9,0:7:17.89:0,18,253	1/1:7,9:16:41.67:548,42,0	1/1:11,14:25:72.17:1247,72,0	1/1:8,7:15:38.68:562,39,0	0/0:33,0:32:93.31:0,93,1448	1/1:4,4:8:23.93:429,24,0	1/1:8,14:22:63.17:1213,63,0	1/1:6,13:19:50.59:829,51,0	1/1:12,7:19:50.93:780,51,0	1/1:10,9:19:54.01:880,54,0	1/1:4,5:9:24.06:368,24,0	0/0:27,0:27:75.24:0,75,1165	1/1:6,10:16:36.09:712,36,0	0/0:20,0:20:45.15:0,45,714	0/0:6,0:6:4.76:0,5,217	1/1:9,6:15:42.11:708,42,0	1/1:6,18:24:63.04:1047,63,0	1/1:7,3:10:20.97:227,21,0	1/1:9,7:16:35.81:535,36,0	1/1:11,9:20:53.71:668,54,0	1/1:8,7:15:27.03:360,27,0	1/1:11,5:16:35.83:518,36,0	1/1:13,7:20:56.85:878,57,0	1/1:11,9:21:56.50:909,57,0	1/1:3,2:5:14.95:208,15,0
chr10	25307170	.	AC	A	564.51	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-2.090;DP=454;FS=11.375;HRun=2;HaplotypeScore=137.4942;InbreedingCoeff=0.9766;MQ=68.26;MQ0=0;MQRankSum=1.680;QD=28.23;ReadPosRankSum=2.185;VQSLOD=2.0786;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:66.22:0,66,987	0/0:10,0:10:27.08:0,27,384	0/0:10,0:10:25.85:0,26,358	0/0:11,0:11:30.07:0,30,388	0/0:13,0:13:39.13:0,39,582	0/0:24,0:24:66.20:0,66,965	0/0:22,0:21:57.19:0,57,833	0/0:32,0:32:93.29:0,93,1336	0/0:11,0:11:33.11:0,33,494	0/0:22,0:22:63.21:0,63,936	0/0:13,0:13:33.11:0,33,492	0/0:16,0:16:45.15:0,45,665	0/0:17,0:17:51.17:0,51,750	0/0:12,0:12:36.12:0,36,538	0/0:25,0:25:75.23:0,75,1100	0/0:13,0:13:33.11:0,33,494	1/1:1,15:16:42.08:525,42,0	1/1:0,4:4:12.04:156,12,0	0/0:15,0:15:39.13:0,39,579	0/0:16,0:16:45.15:0,45,671	0/0:9,0:9:24.08:0,24,359	0/0:22,0:22:54.18:0,54,807	0/0:18,0:18:51.17:0,51,763	0/0:19,0:19:39.13:0,39,583	0/0:12,0:12:36.12:0,36,538	0/0:22,0:22:66.22:0,66,982	0/0:22,0:22:63.21:0,63,937	0/0:6,0:6:18.06:0,18,269
chr10	25308043	.	A	AGGAAAGGGAAAG	21590.61	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=6.636;DP=649;FS=2.753;HRun=0;HaplotypeScore=220.6670;InbreedingCoeff=0.9666;MQ=47.31;MQ0=26;MQRankSum=-9.525;QD=55.08;ReadPosRankSum=-0.519;VQSLOD=4.2636;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:43.75:0,44,2124	1/1:5,0:5:12.04:308,12,0	0/0:72,0:17:29.51:0,30,535	0/0:74,0:15:25.34:0,25,504	1/1:28,0:28:51.13:1130,51,0	1/1:19,0:19:40.85:1168,41,0	1/1:14,0:13:36.99:827,37,0	0/0:18,0:18:27.05:0,27,722	1/1:15,0:15:39.08:1063,39,0	1/1:25,0:24:59.48:1443,59,0	1/1:18,0:17:41.97:1058,42,0	1/1:14,0:14:33.07:892,33,0	1/1:19,0:19:48.09:1242,48,0	1/1:14,0:14:39.06:785,39,0	0/0:23,0:23:54.16:0,54,1485	1/1:19,0:18:42.09:1141,42,0	0/0:28,0:28:69.19:0,69,2165	0/0:9,0:9:7.09:0,7,397	1/1:27,0:27:69.08:1449,69,0	1/1:26,0:25:57.16:1502,57,0	1/1:10,4:15:21.07:768,21,0	1/1:25,0:25:60.19:1554,60,0	1/1:19,0:18:37.94:899,38,0	1/1:17,0:17:26.80:580,27,0	1/1:16,0:16:32.63:792,33,0	1/1:21,0:19:48.16:1339,48,0	1/1:25,0:25:52.99:1532,53,0	1/1:10,0:7:9.03:120,9,0
chr10	25308052	.	A	AAG	862.86	PASS	AB=0.933;AC=35;AF=0.729;AN=48;BaseQRankSum=-3.338;DP=693;FS=18.450;HRun=0;HaplotypeScore=219.3237;InbreedingCoeff=0.3183;MQ=44.63;MQ0=30;MQRankSum=1.190;QD=1.87;ReadPosRankSum=-3.711;VQSLOD=0.4811;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:34:10.08:0,10,46	1/1:9,0:9:3.01:42,3,0	./.	0/1:62,0:11:0:0,0,0	1/1:28,1:29:6.02:77,6,0	1/1:20,0:20:3:25,3,0	1/1:22,0:21:6.32:65,6,0	1/1:24,0:23:1.25:3,1,0	./.	1/1:27,0:25:6.02:88,6,0	1/1:20,2:21:12.02:154,12,0	1/1:14,1:16:3.01:44,3,0	1/1:16,1:19:5.81:57,6,0	1/1:16,1:20:3.01:44,3,0	0/0:12,0:21:30.52:0,31,152	0/1:17,2:20:22.25:80,0,22	0/0:21,0:31:22.73:0,23,111	0/0:8,0:8:2.92:0,3,17	1/1:32,0:31:3.01:43,3,0	1/1:27,0:27:3.01:44,3,0	1/1:17,0:16:6.02:88,6,0	1/1:24,0:24:3.01:35,3,0	./.	0/0:14,3:21:3:0,3,33	1/1:18,4:23:3.01:44,3,0	1/1:23,0:20:3:27,3,0	0/1:23,1:24:42.47:42,0,53	./.
chr10	25308053	.	AG	A	3741.16	PASS	AB=0.826;AC=20;AF=0.357;AN=56;BaseQRankSum=13.924;DP=673;FS=1.366;HRun=1;HaplotypeScore=174.3089;InbreedingCoeff=-0.5431;MQ=45.54;MQ0=30;MQRankSum=-8.716;QD=8.99;ReadPosRankSum=-3.487;VQSLOD=-0.0856;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:60:0,60,729	0/1:7,1:8:24.61:25,0,92	0/0:61,0:12:32.98:0,33,355	0/0:62,0:11:24.43:0,24,271	0/1:23,6:29:99:218,0,131	0/1:13,6:19:81.69:253,0,82	0/1:16,3:19:99:185,0,116	0/0:26,0:25:57.94:0,58,704	0/1:10,6:16:49.98:243,0,50	0/1:17,6:21:99:133,0,501	0/1:14,8:21:84.73:232,0,85	0/1:8,5:14:7.23:216,0,7	0/1:13,5:18:99:208,0,125	0/1:20,1:23:84.08:115,0,84	0/0:22,0:22:34.03:0,34,338	0/1:18,5:23:99:229,0,190	0/0:32,0:32:63.86:0,64,635	0/0:8,0:8:15.68:0,16,186	0/1:23,4:26:99:130,0,450	0/1:19,8:28:91.94:352,0,92	0/1:16,0:15:30.69:31,0,39	0/1:14,8:23:23.13:400,0,23	0/1:16,5:19:23.90:203,0,24	0/1:18,2:20:42.70:43,0,60	0/1:17,4:22:52.19:175,0,52	0/1:18,3:18:99:134,0,323	0/1:14,6:21:99:218,0,219	0/0:11,1:8:8.78:0,9,143
chr10	25308496	.	A	AT	112.52	PASS	AB=0.813;AC=2;AF=0.036;AN=56;BaseQRankSum=3.415;DP=323;FS=11.222;HRun=0;HaplotypeScore=65.1156;InbreedingCoeff=-0.0489;MQ=83.76;MQ0=0;MQRankSum=3.844;QD=3.88;ReadPosRankSum=-3.746;VQSLOD=0.6926;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:54.17:0,54,739	0/0:11,0:11:33.11:0,33,460	0/1:10,5:15:99:173,0,308	0/1:12,2:14:28.17:28,0,390	0/0:22,0:22:56.32:0,56,737	0/0:10,0:10:30.10:0,30,418	0/0:8,0:8:21.07:0,21,289	0/0:26,0:26:78.26:0,78,1091	0/0:9,0:9:27.09:0,27,377	0/0:11,0:11:33.11:0,33,459	0/0:13,0:13:39.07:0,39,500	0/0:6,0:6:18.06:0,18,250	0/0:7,0:7:21.07:0,21,293	0/0:9,0:9:27.08:0,27,355	0/0:24,0:24:69.22:0,69,949	0/0:10,0:10:30.10:0,30,418	0/0:16,0:16:48.16:0,48,670	0/0:9,0:9:24.08:0,24,334	0/0:12,0:12:33.11:0,33,460	0/0:12,0:12:30.10:0,30,418	0/0:3,0:3:3.01:0,3,42	0/0:3,0:3:9.03:0,9,125	0/0:5,0:5:15.01:0,15,187	0/0:7,0:7:15.05:0,15,209	0/0:4,0:4:12.04:0,12,167	0/0:14,0:14:42.13:0,42,571	0/0:16,0:16:48.11:0,48,647	0/0:9,0:9:21.07:0,21,293
chr10	25308966	.	TGTCAC	T	26179.88	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=12.807;DP=631;FS=10.244;HRun=0;HaplotypeScore=184.5374;InbreedingCoeff=0.9950;MQ=86.62;MQ0=0;MQRankSum=-16.149;QD=56.54;ReadPosRankSum=4.171;VQSLOD=4.6948;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:81.28:0,81,2567	1/1:0,11:11:30.10:650,30,0	0/0:29,0:29:87.30:0,87,2622	0/0:29,0:29:81.28:0,81,2314	1/1:0,32:32:84.25:1771,84,0	1/1:1,21:22:54.19:1172,54,0	1/1:2,12:14:33.11:716,33,0	0/0:31,0:31:90.31:0,90,2782	1/1:3,16:19:48.16:1042,48,0	1/1:0,24:24:69.22:1454,69,0	1/1:3,30:33:84.20:1732,84,0	1/1:1,16:17:48.16:1040,48,0	1/1:0,24:24:66.23:1428,66,0	1/1:0,19:19:54.15:1127,54,0	0/0:21,0:21:63.20:0,63,1880	1/1:1,18:19:54.19:1170,54,0	0/0:24,0:24:68.96:0,69,2162	0/0:7,0:7:15.05:0,15,429	1/1:3,8:11:24.08:484,24,0	1/1:3,24:27:72.25:1535,72,0	1/1:0,13:13:33.07:663,33,0	1/1:2,24:26:72.25:1557,72,0	1/1:0,30:30:81.28:1752,81,0	1/1:1,11:12:17.90:345,18,0	1/1:0,22:22:63.22:1366,63,0	1/1:0,25:25:75.26:1596,75,0	1/1:1,34:35:90.31:1953,90,0	1/1:0,28:28:75.26:1627,75,0
chr10	25309163	.	TG	T	19882.62	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=18.711;DP=729;FS=20.109;HRun=2;HaplotypeScore=177.2754;InbreedingCoeff=0.9705;MQ=82.71;MQ0=0;MQRankSum=-6.204;QD=36.96;ReadPosRankSum=5.493;VQSLOD=2.1339;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,108,1617	1/1:0,2:2:6.02:78,6,0	0/0:33,0:33:96.31:0,96,1415	0/0:30,0:30:78.69:0,79,1091	1/1:0,34:34:99:1280,99,0	1/1:0,23:23:69.22:896,69,0	1/1:0,28:28:72.23:935,72,0	0/0:31,0:31:93.32:0,93,1393	1/1:0,25:25:75.24:970,75,0	1/1:0,28:28:81.26:1052,81,0	1/1:1,20:21:57.19:740,57,0	1/1:0,27:27:75.24:973,75,0	1/1:0,19:19:57.19:739,57,0	1/1:0,20:20:54.18:700,54,0	0/0:35,0:35:99:0,105,1573	1/1:0,25:25:72.23:935,72,0	0/0:20,0:20:60.20:0,60,899	0/0:3,0:2:9.03:0,9,135	1/1:0,13:13:39.10:489,39,0	1/1:0,35:35:99:1324,102,0	1/1:1,38:39:99:1286,99,0	1/1:0,31:31:90.29:1169,90,0	1/1:0,35:35:99:1324,102,0	1/1:1,18:19:51.16:658,51,0	1/1:0,19:19:57.19:740,57,0	1/1:0,32:32:96.29:1228,96,0	1/1:1,37:38:99:1432,111,0	1/1:0,25:25:72.23:935,72,0
chr10	25310068	.	C	CAAA	4755.45	PASS	AB=0.944;AC=45;AF=0.804;AN=56;BaseQRankSum=6.196;DP=439;FS=3.777;HRun=16;HaplotypeScore=175.4066;InbreedingCoeff=0.6575;MQ=46.51;MQ0=6;MQRankSum=-5.557;QD=13.28;ReadPosRankSum=-5.735;VQSLOD=0.1039;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:10,23:37:14.17:194,14,0	1/1:9,0:9:6.02:87,6,0	0/0:15,0:5:4.67:0,5,28	0/0:14,0:4:8.35:0,8,56	1/1:23,0:23:30.02:353,30,0	1/1:15,0:15:21.04:265,21,0	1/1:10,0:10:11.77:133,12,0	0/1:12,0:17:21.07:31,0,21	1/1:19,0:18:20.98:235,21,0	1/1:17,0:15:18.89:224,19,0	1/1:16,0:16:16.60:189,17,0	1/1:8,0:8:6.02:77,6,0	1/1:12,0:12:12.04:156,12,0	1/1:7,0:7:6.02:79,6,0	0/0:21,0:21:7.85:0,8,106	1/1:10,0:8:17.96:195,18,0	0/0:8,0:16:17.01:0,17,101	0/0:6,0:12:11.97:0,12,81	1/1:12,0:10:12.04:171,12,0	1/1:30,0:29:52.68:645,53,0	1/1:3,0:3:3.01:43,3,0	1/1:17,0:16:27.08:345,27,0	1/1:19,0:19:17.08:209,17,0	1/1:14,0:14:6.49:84,6,0	1/1:17,0:16:17.74:182,18,0	1/1:22,0:21:36.54:485,37,0	1/1:14,0:14:24.05:294,24,0	1/1:9,0:9:6.02:79,6,0
chr10	25310089	.	GAGAATGA	G	8537.94	PASS	AC=40;AF=0.741;AN=54;BaseQRankSum=7.726;DP=321;FS=5.237;HRun=0;HaplotypeScore=83.4731;InbreedingCoeff=0.8444;MQ=63.89;MQ0=1;MQRankSum=-9.988;QD=41.65;ReadPosRankSum=4.415;VQSLOD=4.3091;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:24.08:0,24,922	1/1:2,7:9:11.92:295,12,0	0/0:14,0:9:24:0,24,539	0/0:16,0:12:30.10:0,30,1135	1/1:3,13:16:18.06:423,18,0	1/1:1,6:7:18.06:443,18,0	1/1:1,3:4:6.02:148,6,0	0/0:15,0:15:21.07:0,21,729	1/1:3,8:11:21.07:517,21,0	1/1:4,10:12:30.10:717,30,0	1/1:1,9:10:24.08:591,24,0	1/1:1,1:2:3.01:74,3,0	1/1:2,7:9:15.05:369,15,0	1/1:1,4:5:3.01:74,3,0	0/0:19,0:19:42.14:0,42,1540	1/1:4,4:6:12.04:296,12,0	0/0:13,0:12:30.08:0,30,1065	0/0:13,0:13:30.08:0,30,1060	1/1:1,7:8:21.04:439,21,0	1/1:4,18:21:48.16:1182,48,0	./.	1/1:4,10:13:30.10:726,30,0	1/1:6,4:10:6.02:148,6,0	1/1:1,11:12:15.05:370,15,0	1/1:5,2:6:6.02:148,6,0	1/1:9,13:21:42.13:987,42,0	1/1:3,7:10:18.06:443,18,0	1/1:1,3:4:6.02:148,6,0
chr10	25310213	.	C	CT	1176	PASS	AB=0.959;AC=18;AF=0.321;AN=56;BaseQRankSum=6.212;DP=333;FS=12.593;HRun=0;HaplotypeScore=103.4382;InbreedingCoeff=-0.3480;MQ=40.85;MQ0=27;MQRankSum=-3.152;QD=6.57;ReadPosRankSum=1.666;VQSLOD=2.9104;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:21:29.72:0,30,413	0/1:7,0:7:35.74:40,0,36	0/0:7,0:4:12.04:0,12,165	0/0:12,0:2:6.02:0,6,83	0/1:10,3:13:65.12:138,0,65	0/1:9,2:10:77.88:78,0,109	0/0:10,0:7:9.03:0,9,124	0/0:17,0:14:42.14:0,42,580	0/1:8,1:9:55.52:78,0,56	0/1:10,0:9:5.94:6,0,228	0/1:11,0:10:33.68:34,0,112	0/1:10,0:9:64.89:127,0,65	0/1:7,0:7:19.28:19,0,147	0/0:7,0:7:9.03:0,9,124	0/0:20,0:20:23.73:0,24,284	0/1:8,0:7:14.90:81,0,15	0/0:20,0:18:26.96:0,27,338	0/0:14,0:12:27.30:0,27,345	0/0:6,0:6:12.04:0,12,164	0/1:19,0:19:41.45:41,0,350	0/0:17,0:14:12.04:0,12,165	0/1:12,0:11:99:115,0,106	0/1:14,3:16:86.84:161,0,87	0/1:14,1:14:70.73:75,0,71	0/1:15,0:15:99:153,0,219	0/1:7,0:6:62.25:62,0,130	1/1:5,0:5:5.81:90,6,0	0/1:3,0:2:35.44:38,0,35
chr10	25310492	.	C	CAT	16950.68	PASS	AB=0.591;AC=45;AF=0.804;AN=56;BaseQRankSum=-8.349;DP=566;FS=0.938;HRun=0;HaplotypeScore=68.4520;InbreedingCoeff=0.8170;MQ=74.32;MQ0=1;MQRankSum=-1.990;QD=36.69;ReadPosRankSum=5.078;VQSLOD=6.6944;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:69.22:0,69,878	1/1:2,9:11:21.07:351,21,0	0/0:16,0:16:26.11:0,26,301	0/0:15,0:15:30.09:0,30,366	1/1:5,20:26:48.16:801,48,0	1/1:3,26:29:40.07:1217,40,0	1/1:1,11:12:27.09:451,27,0	0/0:27,0:27:63.15:0,63,773	1/1:2,25:27:37.06:1166,37,0	1/1:5,26:31:78.22:1240,78,0	1/1:4,17:22:1.34:564,1,0	0/1:4,9:13:13.90:327,0,14	1/1:1,19:20:51.17:853,51,0	1/1:6,18:25:48.16:803,48,0	0/0:21,0:20:42.10:0,42,507	1/1:1,11:12:27.09:452,27,0	1/1:4,1:19:39.03:371,39,0	1/1:1,0:13:33.02:307,33,0	1/1:0,17:16:48.13:751,48,0	1/1:3,31:34:84.29:1405,84,0	1/1:1,13:14:36.12:602,36,0	1/1:5,20:25:60.20:987,60,0	1/1:5,15:20:45.15:731,45,0	1/1:4,14:18:3.94:614,4,0	1/1:4,21:25:54.18:903,54,0	1/1:4,20:24:60.21:999,60,0	1/1:2,14:16:39.13:652,39,0	1/1:0,8:8:24.08:401,24,0
chr10	25311129	.	GT	G	9177.14	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=2.508;DP=636;FS=1.191;HRun=7;HaplotypeScore=78.5585;InbreedingCoeff=0.9871;MQ=75.39;MQ0=7;MQRankSum=1.819;QD=25.85;ReadPosRankSum=5.658;VQSLOD=5.0944;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:56.29:0,56,676	1/1:1,6:7:12.02:122,12,0	0/0:73,0:38:47.75:0,48,598	0/0:92,0:42:12.36:0,12,389	1/1:2,21:23:63.14:640,63,0	1/1:2,24:26:69.15:702,69,0	1/1:2,11:13:24.05:245,24,0	0/0:29,0:29:80.07:0,80,985	1/1:2,12:14:30.07:306,30,0	1/1:1,16:17:48.11:489,48,0	1/1:5,19:24:54.12:551,54,0	1/1:0,12:12:36.08:367,36,0	1/1:1,17:18:48.11:490,48,0	1/1:2,14:16:39.09:398,39,0	0/0:25,0:25:72.23:0,72,905	1/1:0,12:12:36.08:367,36,0	0/0:21,0:22:63.02:0,63,752	0/0:13,0:13:39.12:0,39,491	1/1:1,13:14:39.09:398,39,0	1/1:0,25:25:72.12:721,72,0	1/1:4,16:20:53.60:516,54,0	1/1:1,14:15:36.04:356,36,0	1/1:0,16:16:39.09:398,39,0	1/1:0,14:14:33.08:337,33,0	1/1:1,15:16:42.10:429,42,0	1/1:4,16:20:48.10:490,48,0	1/1:2,23:25:66.15:673,66,0	1/1:0,8:8:18.04:183,18,0
chr10	25312094	.	CA	C	7207.85	PASS	AB=0.524;AC=41;AF=0.732;AN=56;BaseQRankSum=3.227;DP=502;FS=4.159;HRun=11;HaplotypeScore=55.2856;InbreedingCoeff=0.8501;MQ=76.85;MQ0=1;MQRankSum=-1.012;QD=18.82;ReadPosRankSum=6.138;VQSLOD=5.3871;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:33.03:0,33,332	1/1:2,4:6:11.98:99,12,0	0/0:22,0:16:21.32:0,21,185	0/0:15,0:16:5.56:0,6,101	1/1:3,31:34:86.30:688,86,0	1/1:4,14:18:35.95:296,36,0	0/1:1,9:11:2.98:174,0,3	0/0:29,0:29:78.12:0,78,788	1/1:3,13:16:38.95:320,39,0	1/1:4,21:27:66.98:527,67,0	1/1:0,13:13:38.86:312,39,0	1/1:0,16:17:43.99:351,44,0	1/1:2,16:18:41.95:345,42,0	1/1:2,17:19:41.94:345,42,0	0/0:3,0:19:31.28:0,31,157	1/1:0,19:19:44.95:369,45,0	0/0:15,0:15:39.03:0,39,401	0/0:3,0:4:8.84:0,9,70	1/1:5,15:21:49.96:400,50,0	1/1:4,24:28:68.65:543,69,0	1/1:0,6:6:17.98:148,18,0	1/1:2,12:15:37.99:302,38,0	1/1:3,18:21:13.34:333,13,0	1/1:2,10:12:23.97:197,24,0	1/1:2,16:19:0.02:196,0,0	1/1:4,16:20:18.95:362,19,0	1/1:2,24:26:36.94:510,37,0	1/1:0,17:17:47.95:394,48,0
chr10	25312202	.	GC	G	16747.30	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=9.810;DP=568;FS=3.721;HRun=1;HaplotypeScore=56.7289;InbreedingCoeff=0.9959;MQ=83.69;MQ0=0;MQRankSum=-3.931;QD=38.77;ReadPosRankSum=6.194;VQSLOD=4.9500;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:54.18:0,54,859	1/1:0,9:9:24.08:336,24,0	0/0:25,0:25:71.44:0,71,1085	0/0:19,0:19:57.14:0,57,826	1/1:0,28:28:81.27:1132,81,0	1/1:0,26:26:75.25:1049,75,0	1/1:0,10:10:24.08:336,24,0	0/0:31,0:31:93.31:0,93,1465	1/1:0,20:20:60.20:837,60,0	1/1:4,14:18:54.18:746,54,0	1/1:0,24:24:66.22:923,66,0	1/1:0,16:16:39.13:545,39,0	1/1:0,19:19:54.18:755,54,0	1/1:2,9:11:33.06:438,33,0	0/0:16,0:16:48.16:0,48,767	1/1:0,18:18:48.16:671,48,0	0/0:16,0:16:48.13:0,48,728	0/0:9,0:9:24.06:0,24,358	1/1:0,24:24:72.21:971,72,0	1/1:0,45:45:99:1674,123,0	1/1:0,5:5:15.05:210,15,0	1/1:0,15:15:42.14:587,42,0	1/1:0,27:27:78.26:1091,78,0	1/1:0,17:17:48.16:671,48,0	1/1:0,29:29:69.23:965,69,0	1/1:0,19:19:57.19:797,57,0	1/1:0,36:36:99:1384,99,0	1/1:0,16:16:45.15:629,45,0
chr10	25312755	.	TA	T	10881.13	PASS	AB=1.000;AC=43;AF=0.768;AN=56;BaseQRankSum=12.133;DP=541;FS=0.000;HRun=7;HaplotypeScore=86.9885;InbreedingCoeff=0.8865;MQ=68.40;MQ0=0;MQRankSum=1.727;QD=24.79;ReadPosRankSum=3.335;VQSLOD=5.1453;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:30.09:0,30,371	1/1:0,7:7:17.99:171,18,0	0/1:8,0:7:9.22:9,0,61	0/0:6,0:5:5.94:0,6,41	1/1:4,31:35:86.97:854,87,0	1/1:5,24:29:70.88:739,71,0	1/1:0,7:7:21.05:214,21,0	0/0:33,0:33:87.24:0,87,1034	1/1:4,22:26:48.10:488,48,0	1/1:2,27:29:81.06:793,81,0	1/1:1,21:22:63.05:617,63,0	1/1:2,14:16:36.07:366,36,0	1/1:1,21:22:63.14:641,63,0	1/1:0,12:12:27.06:275,27,0	0/0:19,0:19:51.15:0,51,621	1/1:1,11:12:30.06:305,30,0	0/0:19,0:19:54.17:0,54,665	0/0:14,0:14:29.95:0,30,334	1/1:2,18:20:51.03:480,51,0	1/1:1,30:31:87.04:851,87,0	1/1:0,11:11:30.06:305,30,0	1/1:1,19:20:54.07:538,54,0	1/1:2,22:24:60.07:598,60,0	1/1:2,12:14:30.06:305,30,0	1/1:3,19:22:51.11:519,51,0	1/1:2,20:22:59.93:567,60,0	1/1:1,38:39:96.21:975,96,0	1/1:2,9:11:27.05:274,27,0
chr10	25313299	.	CAG	C	1123.17	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-4.521;DP=622;FS=0.000;HRun=0;HaplotypeScore=111.3691;InbreedingCoeff=0.9898;MQ=87.80;MQ0=0;MQRankSum=-4.925;QD=40.11;ReadPosRankSum=0.616;VQSLOD=5.3514;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,28:28:75.26:1218,75,0	0/0:11,0:11:33.11:0,33,614	0/0:23,0:24:69.09:0,69,1264	0/0:20,0:20:51.04:0,51,977	0/0:29,0:29:87.27:0,87,1567	0/0:25,0:25:72.22:0,72,1284	0/0:18,0:18:54.17:0,54,982	0/0:38,0:38:99:0,114,2110	0/0:28,0:28:84.26:0,84,1516	0/0:29,0:29:87.18:0,87,1560	0/0:31,0:31:93.32:0,93,1739	0/0:17,0:17:51.16:0,51,907	0/0:24,0:24:72.25:0,72,1348	0/0:18,0:18:54.17:0,54,991	0/0:19,0:19:57.18:0,57,1106	0/0:8,0:8:24.08:0,24,453	0/0:26,0:26:78.24:0,78,1494	0/0:19,0:19:57.15:0,57,1069	0/0:16,0:16:48.14:0,48,863	0/0:39,0:39:99:0,114,2081	0/0:19,0:19:54.16:0,54,972	0/0:25,0:25:75.24:0,75,1378	0/0:20,0:20:60.18:0,60,1063	0/0:17,0:17:51.16:0,51,938	0/0:17,0:17:51.17:0,51,966	0/0:25,0:25:75.26:0,75,1413	0/0:26,0:25:78.24:0,78,1406	0/0:6,0:6:18.06:0,18,340
chr10	25313462	.	TA	T	9603.18	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=4.458;DP=540;FS=1.757;HRun=9;HaplotypeScore=57.8588;InbreedingCoeff=0.9957;MQ=76.74;MQ0=0;MQRankSum=-2.364;QD=23.65;ReadPosRankSum=3.945;VQSLOD=5.6349;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:2,0:24:56.97:0,57,299	1/1:2,9:11:24.01:220,24,0	0/0:11,0:11:24.07:0,24,276	0/0:14,0:14:24.06:0,24,269	1/1:2,24:26:54.01:494,54,0	1/1:1,17:18:48.02:439,48,0	1/1:2,13:15:36.02:330,36,0	0/0:27,0:27:72.20:0,72,820	1/1:1,27:28:75.04:686,75,0	1/1:2,20:22:60.02:545,60,0	1/1:1,28:29:81.04:741,81,0	1/1:1,15:16:42.02:384,42,0	1/1:1,22:23:66.03:604,66,0	1/1:1,16:17:45.02:412,45,0	0/0:22,0:22:63.13:0,63,704	1/1:1,9:10:27.01:247,27,0	0/0:24,0:24:66.15:0,66,738	0/0:12,0:12:36.09:0,36,404	1/1:2,16:18:47.97:431,48,0	1/1:1,23:24:60.02:549,60,0	1/1:0,13:13:39.02:357,39,0	1/1:2,18:19:45.02:412,45,0	1/1:0,12:13:38.06:335,38,0	1/1:4,17:21:48.02:439,48,0	1/1:0,16:16:39.02:357,39,0	1/1:2,25:27:75.04:686,75,0	1/1:1,31:32:87.05:796,87,0	1/1:1,6:7:15.01:137,15,0
chr10	25313819	.	TCTTCTCCTCCTCCTCCCCCTC	T	15329.70	PASS	AB=0.606;AC=41;AF=0.732;AN=56;BaseQRankSum=7.692;DP=361;FS=21.587;HRun=0;HaplotypeScore=151.6699;InbreedingCoeff=0.7516;MQ=42.13;MQ0=33;MQRankSum=-5.662;QD=59.42;ReadPosRankSum=3.400;VQSLOD=3.0745;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:84.21:0,84,6177	1/1:2,0:2:6.02:188,6,0	0/0:23,0:4:11.91:0,12,411	0/0:17,0:5:12.93:0,13,387	1/1:3,11:14:6.02:209,6,0	1/1:2,9:10:18.06:1025,18,0	1/1:5,0:5:14.97:416,15,0	0/0:12,0:6:15.04:0,15,385	1/1:0,15:15:12.04:678,12,0	1/1:3,11:13:24.01:1038,24,0	1/1:0,20:20:27.05:1216,27,0	1/1:0,8:8:9.03:514,9,0	1/1:0,12:12:18.06:1002,18,0	1/1:0,13:13:9.03:529,9,0	0/0:8,0:8:24.08:0,24,1967	1/1:2,19:21:30.02:1430,30,0	0/0:10,0:7:20.09:0,20,1104	0/0:4,0:4:8.95:0,9,68	1/1:2,11:11:32.80:1018,33,0	1/1:2,19:19:24.08:1229,24,0	1/1:8,2:7:9.02:307,9,0	1/1:1,10:11:12.04:632,12,0	1/1:0,10:10:12.04:612,12,0	1/1:3,3:6:0.47:1,0,0	1/1:1,15:15:21.07:1132,21,0	0/1:7,13:18:91.44:1310,0,91	1/1:0,11:11:4.77:312,5,0	1/1:1,3:4:9.03:530,9,0
chr10	25313909	.	TTCTTTCTCTC	T	3503.79	PASS	AB=0.891;AC=34;AF=0.680;AN=50;BaseQRankSum=1.946;DP=547;FS=9.605;HRun=0;HaplotypeScore=172.0766;InbreedingCoeff=0.5005;MQ=52.12;MQ0=19;MQRankSum=-3.361;QD=12.34;ReadPosRankSum=3.727;VQSLOD=2.0440;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:37:95.83:0,96,2573	1/1:8,3:11:2.77:112,3,0	0/0:49,0:16:22.27:0,22,317	0/0:84,0:37:24.31:0,24,751	1/1:16,12:29:1.15:17,1,0	1/1:8,8:17:2.20:88,2,0	0/0:0,15:14:1.72:0,2,3	0/0:24,0:23:63.13:0,63,1172	1/1:8,8:16:2.37:95,2,0	1/1:10,7:16:23.44:488,23,0	0/1:18,6:25:1.56:134,0,2	1/1:9,4:15:2.12:135,2,0	1/1:7,7:15:20.82:579,21,0	1/1:8,5:12:4.35:106,4,0	0/0:13,0:12:29.87:0,30,650	1/1:12,6:18:14.91:269,15,0	1/1:7,0:6:8.98:72,9,0	0/1:3,0:3:31.83:32,0,52	1/1:12,2:10:26.98:463,27,0	1/1:10,9:18:9.96:65,10,0	./.	1/1:16,5:23:2.94:43,3,0	0/0:11,7:18:1.72:0,2,4	./.	1/1:9,6:16:2.94:18,3,0	1/1:10,5:16:19.45:690,19,0	1/1:7,2:9:2.41:97,2,0	./.
chr10	25313940	.	TCA	T	237.72	PASS	AB=1.000;AC=9;AF=0.173;AN=52;BaseQRankSum=-1.619;DP=447;FS=0.000;HRun=0;HaplotypeScore=174.2726;InbreedingCoeff=0.3940;MQ=30.83;MQ0=13;MQRankSum=3.794;QD=2.73;ReadPosRankSum=2.470;VQSLOD=2.4180;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:30,6:35:29.99:321,30,0	0/0:10,0:10:17.11:0,17,95	0/0:24,0:2:2.98:0,3,22	0/0:22,0:4:8.50:0,9,65	0/0:33,0:32:5.49:0,5,24	0/0:22,0:22:3.99:0,4,19	1/1:16,0:14:0.47:1,0,0	0/1:13,0:10:4.97:5,0,88	0/0:18,0:18:11.79:0,12,65	0/0:19,0:16:30.54:0,31,240	0/0:20,0:20:1.07:0,1,22	0/0:14,0:14:10.44:0,10,49	0/0:16,0:16:19.93:0,20,117	0/0:13,0:11:3.62:0,4,14	0/0:13,0:12:18.02:0,18,202	0/0:11,0:11:4.91:0,5,20	0/1:6,0:5:0.04:0,0,0	1/1:4,0:3:3.11:16,3,0	0/0:10,0:8:22.45:0,22,237	0/0:20,0:19:3.33:0,3,19	./.	0/0:24,0:24:14.58:0,15,73	0/0:17,0:17:2.73:0,3,24	0/1:12,0:12:0:0,0,0	0/0:19,0:19:5.59:0,6,31	0/0:16,0:16:30.41:0,30,232	0/0:11,0:10:20.87:0,21,130	./.
chr10	25313965	.	CAT	C	306.84	PASS	AB=0.991;AC=27;AF=0.482;AN=56;BaseQRankSum=-1.653;DP=533;FS=4.333;HRun=0;HaplotypeScore=181.3352;InbreedingCoeff=-0.0661;MQ=34.97;MQ0=16;MQRankSum=4.139;QD=0.86;ReadPosRankSum=-2.758;VQSLOD=1.9373;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:37:0.51:0,1,131	0/1:11,0:11:6.07:6,0,101	0/0:38,0:6:12.20:0,12,111	0/0:37,0:8:10.01:0,10,226	0/1:36,0:35:15.59:17,0,16	0/1:27,1:28:11.32:20,0,11	0/1:14,0:12:0.02:0,0,0	0/0:16,0:14:42.02:0,42,622	0/0:19,0:19:7.44:0,7,128	0/1:20,1:19:87.48:87,0,225	1/1:19,0:19:1.11:3,1,0	0/0:12,0:12:4.15:0,4,15	0/1:16,0:16:1.94:2,0,110	0/1:17,0:15:7.30:17,0,7	0/1:18,0:17:6.26:64,0,6	0/1:11,0:11:18.20:18,0,21	1/1:8,0:7:2.41:10,2,0	1/1:5,0:5:8.21:45,8,0	0/0:15,0:11:8.35:0,8,322	0/1:19,0:18:9.51:10,0,41	1/1:15,0:14:5.82:43,6,0	0/1:26,0:26:7.26:7,0,124	1/1:20,0:20:3.54:27,4,0	0/1:13,0:13:0:0,0,0	0/1:21,0:21:2.56:3,0,36	0/1:20,0:20:39.16:39,0,307	0/1:14,1:14:22.31:22,0,136	1/1:3,1:3:3.22:13,3,0
chr10	25313967	.	T	TACACACAC	4964.07	PASS	AB=0.865;AC=41;AF=0.732;AN=56;BaseQRankSum=-1.494;DP=534;FS=0.000;HRun=0;HaplotypeScore=190.4194;InbreedingCoeff=0.6285;MQ=35.49;MQ0=16;MQRankSum=-1.197;QD=12.26;ReadPosRankSum=0.912;VQSLOD=3.1971;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:20,0:38:16.56:48,0,17	1/1:4,5:11:7.49:232,7,0	0/0:38,0:6:7.52:0,8,83	0/0:37,0:8:14.24:0,14,149	1/1:31,2:33:21:276,21,0	1/1:25,2:28:8.68:86,9,0	1/1:12,1:12:5.98:56,6,0	0/0:18,0:16:32.99:0,33,472	1/1:12,6:18:24:596,24,0	1/1:21,0:19:50.81:620,51,0	1/1:18,1:19:4.32:135,4,0	0/1:11,1:12:0:0,0,0	1/1:16,1:17:11.93:303,12,0	1/1:15,2:15:7.29:118,7,0	0/0:12,0:17:27.09:0,27,463	1/1:9,2:11:6:136,6,0	0/1:8,0:7:1.92:2,0,48	0/0:4,0:5:8.89:0,9,103	1/1:16,0:12:23.91:249,24,0	1/1:18,1:19:14.90:156,15,0	1/1:15,0:14:8.52:93,9,0	1/1:24,3:27:14.89:231,15,0	1/1:20,0:20:12.02:157,12,0	0/0:13,0:13:1.25:0,1,3	1/1:14,5:20:12.04:261,12,0	1/1:18,1:20:41.23:514,41,0	1/1:14,1:14:32.97:624,33,0	1/1:4,0:3:6:70,6,0
chr10	25317073	.	A	AG	21309.62	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-11.558;DP=701;FS=1.418;HRun=2;HaplotypeScore=69.0237;InbreedingCoeff=0.9999;MQ=97.41;MQ0=0;MQRankSum=-8.286;QD=41.30;ReadPosRankSum=5.871;VQSLOD=4.4675;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,138,1714	1/1:1,11:12:36.11:520,36,0	0/0:33,0:33:93.13:0,93,1111	0/0:36,0:36:96.15:0,96,1173	1/1:7,22:29:81.26:1188,81,0	1/1:2,14:16:48.15:699,48,0	1/1:1,28:29:75.25:1124,75,0	0/0:38,0:38:93.28:0,93,1171	1/1:0,25:25:66.22:988,66,0	1/1:3,19:22:63.20:916,63,0	1/1:2,20:22:63.21:943,63,0	1/1:2,23:25:66.22:980,66,0	1/1:4,25:29:87.27:1254,87,0	1/1:1,17:18:54.17:788,54,0	0/0:31,0:31:90.25:0,90,1124	1/1:2,19:20:63.21:934,63,0	1/1:1,25:26:66.22:989,66,0	1/1:0,25:25:72.24:1069,72,0	1/1:3,18:21:57.17:832,57,0	1/1:0,26:26:75.16:1072,75,0	1/1:4,29:33:90.29:1329,90,0	1/1:1,13:14:36.12:529,36,0	1/1:3,16:19:54.17:788,54,0	1/1:1,16:17:48.16:719,48,0	1/1:3,22:25:72.21:1037,72,0	1/1:1,25:26:75.25:1118,75,0	1/1:6,17:23:63.21:930,63,0	1/1:1,12:13:39.11:563,39,0
chr10	25317159	.	GC	G	19357.64	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=12.089;DP=727;FS=2.108;HRun=2;HaplotypeScore=104.7808;InbreedingCoeff=0.9985;MQ=89.28;MQ0=0;MQRankSum=-6.710;QD=37.30;ReadPosRankSum=6.462;VQSLOD=4.4297;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,135,1954	1/1:1,21:22:63.19:802,63,0	0/0:19,0:19:51.09:0,51,698	0/0:35,0:35:99:0,105,1501	1/1:2,30:32:84.26:1076,84,0	1/1:0,19:19:57.19:739,57,0	1/1:1,21:22:48.16:623,48,0	0/0:31,0:31:93.31:0,93,1375	1/1:1,12:13:39.13:506,39,0	1/1:0,44:44:99:1714,132,0	1/1:1,22:23:66.16:837,66,0	1/1:0,17:17:51.17:662,51,0	1/1:0,31:31:87.28:1129,87,0	1/1:0,22:22:60.20:779,60,0	0/0:29,0:29:84.28:0,84,1257	1/1:0,19:19:57.19:740,57,0	0/0:31,0:31:87.28:0,87,1281	0/0:15,0:14:45.15:0,45,663	1/1:0,26:26:75.21:944,75,0	1/1:0,12:12:36.12:467,36,0	1/1:0,45:45:99:1752,135,0	1/1:0,28:28:81.26:1052,81,0	1/1:0,28:28:84.27:1091,84,0	1/1:1,17:18:51.08:640,51,0	1/1:1,26:27:81.26:1051,81,0	1/1:1,31:32:96.30:1233,96,0	1/1:0,33:33:99:1285,99,0	1/1:0,6:6:18.06:234,18,0
chr10	25317838	.	CT	C	14680.20	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=10.454;DP=652;FS=8.213;HRun=7;HaplotypeScore=104.8431;InbreedingCoeff=0.9982;MQ=77.48;MQ0=0;MQRankSum=-4.448;QD=27.14;ReadPosRankSum=5.726;VQSLOD=4.2681;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:69.02:0,69,813	1/1:1,8:9:21.05:214,21,0	0/0:18,0:17:36.11:0,36,436	0/0:15,0:15:42.11:0,42,498	1/1:4,45:48:99:1255,123,0	1/1:0,23:23:63.14:643,63,0	1/1:2,9:11:27.06:275,27,0	0/0:34,0:34:93.30:0,93,1166	1/1:1,23:24:66.15:673,66,0	1/1:0,31:31:87.19:883,87,0	1/1:2,25:27:69.15:703,69,0	1/1:1,30:31:84.19:857,84,0	1/1:2,28:30:72.16:733,72,0	1/1:0,27:27:81.18:826,81,0	0/0:20,0:20:57.18:0,57,717	1/1:1,34:35:93.21:949,93,0	1/1:3,24:26:66.15:673,66,0	1/1:0,8:8:24.05:245,24,0	1/1:4,16:20:48.10:488,48,0	1/1:1,28:29:84.19:857,84,0	1/1:1,20:21:57.13:581,57,0	1/1:2,20:22:60.14:612,60,0	1/1:1,24:25:66.15:673,66,0	1/1:2,21:23:63.14:643,63,0	1/1:1,16:17:39.09:398,39,0	1/1:0,15:15:45.10:459,45,0	1/1:2,24:26:72.16:734,72,0	1/1:1,10:11:30.07:306,30,0
chr10	25318037	.	A	AGT	11382.04	PASS	AB=0.789;AC=45;AF=0.804;AN=56;BaseQRankSum=4.464;DP=553;FS=9.133;HRun=0;HaplotypeScore=146.1352;InbreedingCoeff=0.6842;MQ=57.94;MQ0=11;MQRankSum=-4.135;QD=25.87;ReadPosRankSum=2.711;VQSLOD=5.8223;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:14,4:18:14.08:200,14,0	1/1:1,2:2:6.02:98,6,0	0/0:30,0:14:25.23:0,25,247	0/0:37,0:16:8.97:0,9,122	1/1:13,7:20:30:488,30,0	1/1:10,6:16:33.06:484,33,0	1/1:23,4:25:6.29:523,6,0	0/0:28,0:28:50.18:0,50,587	1/1:16,8:24:33.11:536,33,0	1/1:6,9:15:33.11:535,33,0	1/1:5,3:8:15.05:239,15,0	1/1:16,8:23:41.89:650,42,0	0/1:11,9:20:0.85:469,0,1	1/1:9,13:21:17.36:653,17,0	0/0:18,0:18:42.13:0,42,517	1/1:13,10:23:46.98:777,47,0	1/1:16,1:14:27.09:418,27,0	0/1:11,1:12:2.66:262,0,3	1/1:11,3:14:21.03:299,21,0	1/1:14,7:21:38.33:567,38,0	1/1:20,5:20:17.87:293,18,0	1/1:5,7:12:11.12:277,11,0	1/1:7,11:18:39.08:629,39,0	0/1:16,8:22:5.88:402,0,6	1/1:14,13:27:43.24:674,43,0	1/1:11,5:17:39.05:563,39,0	1/1:6,13:19:51.17:820,51,0	1/1:2,10:12:33.10:527,33,0
chr10	25318052	.	GAA	G	2335.56	PASS	AB=0.880;AC=28;AF=0.500;AN=56;BaseQRankSum=1.278;DP=532;FS=2.437;HRun=2;HaplotypeScore=183.2118;InbreedingCoeff=-0.4556;MQ=45.68;MQ0=23;MQRankSum=-4.836;QD=5.47;ReadPosRankSum=-1.594;VQSLOD=-0.5372;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:14,1:13:38.78:58,0,39	1/1:3,0:2:5.42:23,5,0	0/0:34,1:12:6.01:0,6,328	0/1:36,2:10:62.51:63,0,163	0/1:15,2:17:13.32:62,0,13	0/1:13,2:15:55.27:127,0,55	0/1:21,5:25:37.27:185,0,37	0/0:36,0:35:58.98:0,59,1612	0/1:13,1:14:30.48:30,0,104	0/0:14,1:14:28.45:0,28,155	1/1:6,2:8:5.85:74,6,0	0/1:18,4:21:31.08:158,0,31	0/1:13,3:16:38.72:39,0,137	0/1:20,2:21:56.48:56,0,123	0/0:18,1:19:51.15:0,51,928	0/1:15,4:19:42.99:115,0,43	1/1:7,9:13:29.77:386,30,0	0/1:7,8:14:33.60:227,0,34	0/1:16,1:10:38.61:39,0,144	0/1:11,6:16:69.95:80,0,70	0/1:22,1:18:14.47:87,0,14	0/1:15,1:15:9.59:150,0,10	1/1:15,2:16:24.48:146,24,0	0/1:17,3:18:43.03:90,0,43	0/1:24,1:25:19.44:138,0,19	0/1:12,3:15:16.33:16,0,187	0/1:15,2:17:99:139,0,147	0/1:13,1:14:13.65:14,0,108
chr10	25318054	.	A	ATG	2518.40	PASS	AB=0.931;AC=42;AF=0.750;AN=56;BaseQRankSum=6.586;DP=557;FS=2.078;HRun=0;HaplotypeScore=201.7326;InbreedingCoeff=0.3260;MQ=44.50;MQ0=23;MQRankSum=-4.996;QD=6.00;ReadPosRankSum=4.259;VQSLOD=3.0897;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:11,5:14:35.32:35,0,38	1/1:3,0:3:4.99:17,5,0	0/0:37,0:12:5.67:0,6,59	0/0:42,0:11:10.33:0,10,96	1/1:19,0:19:14.21:85,14,0	1/1:12,1:13:20.49:194,20,0	0/1:27,0:26:4.66:51,0,5	0/0:38,0:38:61.12:0,61,722	1/1:14,2:16:20.88:176,21,0	1/1:15,0:16:27.34:231,27,0	1/1:9,0:9:3.11:9,3,0	1/1:22,0:22:3.08:122,3,0	1/1:18,0:18:23.76:207,24,0	1/1:21,1:22:33.06:271,33,0	0/0:19,0:19:39.09:0,39,452	1/1:19,0:20:24.88:187,25,0	0/1:17,0:14:8.25:23,0,8	1/1:16,0:15:3.64:41,4,0	0/1:14,1:9:11.40:87,0,11	1/1:15,1:15:12.96:96,13,0	0/1:24,0:19:9.03:22,0,9	1/1:16,0:15:2.69:48,3,0	1/1:17,0:16:13.29:55,13,0	1/1:19,0:18:6.73:58,7,0	1/1:26,0:27:18.35:125,18,0	1/1:13,0:15:20.05:124,20,0	1/1:17,0:17:36.54:267,37,0	0/1:13,0:14:6.20:154,0,6
chr10	25318060	.	G	GTGTGCA	527.46	PASS	AB=0.987;AC=25;AF=0.446;AN=56;BaseQRankSum=8.444;DP=570;FS=24.825;HRun=0;HaplotypeScore=239.3019;InbreedingCoeff=-0.4312;MQ=39.52;MQ0=30;MQRankSum=-7.139;QD=1.36;ReadPosRankSum=8.062;VQSLOD=0.9489;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:14:11:0,11,120	1/1:6,0:5:4.59:15,5,0	0/0:40,0:10:23.91:0,24,242	0/0:50,0:9:13.61:0,14,211	0/1:20,0:19:12.19:12,0,88	0/1:16,0:16:27.80:28,0,86	0/1:27,0:27:27.54:28,0,79	0/0:39,0:37:99:0,102,1963	0/0:15,0:16:0.97:0,1,207	0/1:21,0:20:86.74:87,0,123	1/1:10,0:10:1.87:7,2,0	0/1:19,0:19:34.53:57,0,35	0/1:15,0:15:8.75:55,0,9	0/1:23,0:22:44.42:44,0,45	0/0:19,0:19:48.16:0,48,1032	0/1:19,0:19:32.88:33,0,55	0/1:16,1:14:13.38:13,0,290	0/1:15,0:14:30.13:30,0,183	0/1:16,0:9:6.34:6,0,126	0/1:16,0:15:6.27:6,0,78	0/1:25,1:19:27.44:27,0,30	0/1:20,0:19:12.03:12,0,78	1/1:15,0:14:2.62:37,3,0	0/1:15,2:15:15.43:15,0,20	0/1:27,0:27:31.31:31,0,116	0/1:13,0:13:47.07:47,0,231	0/1:15,0:15:18.88:85,0,19	0/1:14,0:14:4.78:5,0,205
chr10	25318062	.	G	GTGTGTGAA	798.96	PASS	AB=0.985;AC=20;AF=0.357;AN=56;BaseQRankSum=4.841;DP=572;FS=1.447;HRun=0;HaplotypeScore=250.0395;InbreedingCoeff=-0.1007;MQ=39.46;MQ0=31;MQRankSum=-6.286;QD=2.73;ReadPosRankSum=0.521;VQSLOD=2.5373;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:15:11.25:0,11,138	1/1:6,0:5:1.72:4,2,0	0/0:43,0:10:10.26:0,10,109	0/0:50,0:9:17.94:0,18,236	0/0:20,0:19:10.54:0,11,84	0/1:15,0:15:1.73:2,0,107	0/1:29,0:28:9.77:10,0,14	0/0:39,0:37:93.40:0,93,1975	0/0:16,0:16:10.91:0,11,127	0/1:21,0:20:41.94:42,0,112	1/1:9,0:9:0.45:1,0,0	0/1:19,0:18:17.29:30,0,17	0/1:15,0:15:9.21:9,0,38	0/1:23,0:22:4.88:5,0,6	0/0:19,0:19:42.14:0,42,1068	0/1:19,0:19:17.56:18,0,23	1/1:18,1:16:18.61:368,19,0	0/1:11,4:14:47.06:412,0,47	0/1:15,0:8:2.30:2,0,75	0/0:16,0:15:7.86:0,8,36	0/0:24,0:19:2.44:0,2,29	0/0:19,0:18:5.46:0,5,89	0/1:15,0:14:9:11,0,9	0/1:17,0:15:7.35:7,0,18	0/1:27,0:27:0.21:0,0,111	0/1:13,0:13:8.26:8,0,144	0/1:16,0:16:12.30:12,0,39	0/0:14,0:14:14.43:0,14,220
chr10	25318070	.	GTGAA	G	1940.14	PASS	AB=0.979;AC=29;AF=0.518;AN=56;BaseQRankSum=-0.581;DP=561;FS=1.069;HRun=0;HaplotypeScore=220.8568;InbreedingCoeff=-0.4103;MQ=37.61;MQ0=37;MQRankSum=-1.614;QD=4.39;ReadPosRankSum=-4.137;VQSLOD=1.7758;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:19,0:16:25.97:26,0,122	1/1:7,0:6:5.51:69,6,0	0/1:41,0:8:13.55:14,0,130	0/0:50,0:6:3.83:0,4,161	0/1:17,1:17:12.73:123,0,13	0/1:17,0:17:20.35:64,0,20	0/1:28,0:26:11.48:99,0,11	0/0:37,0:35:99:0,99,2186	0/1:16,0:16:42.18:64,0,42	0/1:22,0:21:68.68:69,0,90	1/1:9,1:10:5.20:78,5,0	0/1:17,0:17:60.17:60,0,60	0/1:15,1:16:43.31:48,0,43	0/1:21,0:21:48.83:128,0,49	0/0:17,0:17:42.14:0,42,987	0/1:16,0:16:5.94:140,0,6	0/1:17,0:15:33.62:34,0,45	0/1:15,0:14:14.16:111,0,14	0/0:15,0:8:11.88:0,12,90	0/1:16,0:15:14.40:56,0,14	0/1:24,1:21:25.84:64,0,26	0/1:18,0:17:13.67:50,0,14	1/1:15,0:14:15.03:204,15,0	1/1:15,2:15:10.85:114,11,0	1/1:27,1:28:3.52:165,4,0	0/1:12,0:12:23.53:24,0,105	0/1:16,0:16:50.21:73,0,50	0/1:9,4:13:47.70:229,0,48
chr10	25318072	.	GAA	G	3050.12	PASS	AB=0.929;AC=41;AF=0.732;AN=56;BaseQRankSum=5.443;DP=517;FS=3.045;HRun=2;HaplotypeScore=193.6000;InbreedingCoeff=-0.0727;MQ=35.79;MQ0=37;MQRankSum=-4.822;QD=6.57;ReadPosRankSum=5.062;VQSLOD=0.5274;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:16,1:14:22.89:23,0,125	1/1:7,0:6:5.51:69,6,0	0/1:41,1:6:16.56:17,0,113	0/1:42,5:6:22.68:23,0,141	1/1:17,0:16:7.03:154,7,0	1/1:17,0:17:13.61:147,14,0	0/1:24,1:23:11.81:124,0,12	0/0:37,0:35:99:0,99,1775	1/1:14,1:15:15.49:126,15,0	0/1:19,2:20:23.66:173,0,24	1/1:8,1:9:5.29:78,5,0	0/1:13,2:15:7.76:130,0,8	1/1:14,0:14:29.89:169,30,0	1/1:19,0:19:31.18:251,31,0	0/0:16,0:16:42.14:0,42,777	1/1:13,0:13:23.12:211,23,0	0/1:14,2:14:28.88:84,0,29	0/1:13,2:14:28.34:57,0,28	0/1:14,0:7:35.10:35,0,68	1/1:15,0:14:18.07:113,18,0	0/1:22,1:19:36.71:74,0,37	1/1:13,2:14:1.19:65,1,0	1/1:13,1:13:14.79:204,15,0	1/1:13,1:12:10.13:109,10,0	1/1:24,0:24:16.49:199,16,0	0/1:8,1:9:46.46:75,0,46	1/1:13,1:14:31.53:206,32,0	1/1:9,2:11:0.20:299,0,0
chr10	25318073	.	AAT	A	1819.82	PASS	AB=1.000;AC=40;AF=0.714;AN=56;BaseQRankSum=8.761;DP=520;FS=18.643;HRun=0;HaplotypeScore=197.8448;InbreedingCoeff=0.1966;MQ=33.81;MQ0=37;MQRankSum=-7.083;QD=4.47;ReadPosRankSum=1.237;VQSLOD=1.8523;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:14:4.07:0,4,156	1/1:7,0:6:8.77:54,9,0	0/0:44,0:7:0.09:0,0,148	0/1:49,0:5:3.92:4,0,99	1/1:17,0:16:8.81:86,9,0	1/1:17,0:17:23.06:122,23,0	1/1:24,1:23:19.60:126,20,0	0/0:36,0:34:98.86:0,99,1653	1/1:15,0:15:18.44:92,18,0	0/1:21,0:20:60.95:136,0,61	1/1:9,0:9:5.58:37,6,0	1/1:16,0:16:16.73:107,17,0	1/1:13,1:14:17.67:98,18,0	1/1:19,0:19:27.82:138,28,0	0/0:16,0:16:42.04:0,42,726	1/1:12,0:12:24.96:138,25,0	0/1:18,0:16:34.61:35,0,118	0/1:15,0:14:36.22:36,0,80	0/1:14,0:7:28.95:29,0,33	1/1:14,0:13:7.01:29,7,0	0/1:23,0:19:17.34:31,0,17	1/1:15,0:14:15.70:76,16,0	1/1:14,0:13:19.66:116,20,0	1/1:14,0:12:7.56:43,8,0	1/1:22,2:24:31.04:175,31,0	0/1:9,0:9:37.37:37,0,73	1/1:14,0:14:28.37:138,28,0	0/1:11,0:11:12.70:109,0,13
chr10	25318074	.	ATG	A	2911.08	PASS	AB=0.941;AC=40;AF=0.714;AN=56;BaseQRankSum=8.042;DP=526;FS=4.581;HRun=0;HaplotypeScore=195.8465;InbreedingCoeff=0.3667;MQ=33.66;MQ0=38;MQRankSum=-6.758;QD=8.11;ReadPosRankSum=2.507;VQSLOD=2.8025;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:14:8.78:0,9,149	1/1:3,4:6:8.94:71,9,0	0/0:45,0:8:16.81:0,17,194	0/0:51,0:5:6:0,6,68	1/1:12,5:16:9.46:87,9,0	1/1:14,3:17:20.71:208,21,0	1/1:18,8:24:24.54:212,25,0	0/0:37,0:35:81.72:0,82,1285	1/1:12,4:16:23.64:190,24,0	0/1:17,5:21:77.25:329,0,77	1/1:4,5:9:2.97:20,3,0	1/1:14,2:16:20.59:180,21,0	1/1:10,4:14:27.35:230,27,0	1/1:15,3:18:29.68:233,30,0	0/0:16,0:16:33.11:0,33,551	1/1:11,1:12:15.44:141,15,0	0/1:18,0:16:19.83:20,0,139	0/1:15,0:14:52.69:53,0,95	0/1:13,1:7:7.26:83,0,7	1/1:10,4:13:14.96:91,15,0	1/1:21,3:20:13.46:69,13,0	1/1:11,4:14:17.71:158,18,0	1/1:14,0:13:2.74:36,3,0	1/1:12,1:12:1.32:4,1,0	1/1:20,4:24:27.39:252,27,0	0/1:8,1:9:38.23:93,0,38	1/1:10,4:14:32.91:292,33,0	0/1:10,0:11:23.89:41,0,24
chr10	25318076	.	G	GAA	5484.82	PASS	AB=0.816;AC=36;AF=0.643;AN=56;BaseQRankSum=6.653;DP=542;FS=14.734;HRun=0;HaplotypeScore=191.6127;InbreedingCoeff=0.4335;MQ=33.26;MQ0=38;MQRankSum=-8.607;QD=16.08;ReadPosRankSum=-0.741;VQSLOD=3.2524;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:14:14.22:0,14,196	1/1:6,1:6:14.88:111,15,0	0/0:44,0:8:17.97:0,18,210	0/0:52,0:4:11.70:0,12,126	1/1:9,7:16:7.37:169,7,0	1/1:11,6:17:23.71:363,24,0	1/1:18,9:25:8.28:259,8,0	0/0:39,0:37:99:0,102,1558	1/1:9,6:15:3.88:257,4,0	0/1:17,6:22:77.10:386,0,77	1/1:7,2:9:4.36:37,4,0	0/1:12,7:17:10.97:312,0,11	1/1:7,7:14:23.45:456,23,0	1/1:10,9:18:32.90:545,33,0	0/0:17,0:17:39.05:0,39,595	1/1:4,7:11:24.42:329,24,0	0/0:16,0:14:18.61:0,19,204	0/0:14,0:13:17.35:0,17,173	0/1:11,2:7:60.41:117,0,60	1/1:8,8:15:1.96:231,2,0	0/1:25,2:23:20.30:83,0,20	1/1:11,5:15:11.82:192,12,0	1/1:6,9:14:19.30:153,19,0	0/1:11,3:13:0.79:36,0,1	1/1:11,14:25:39.59:395,40,0	1/1:8,3:11:0:280,0,0	1/1:5,9:14:34.40:612,34,0	0/1:8,2:11:48.96:158,0,49
chr10	25318084	.	GTGCA	G	852.18	PASS	AB=0.983;AC=19;AF=0.339;AN=56;BaseQRankSum=2.388;DP=570;FS=0.000;HRun=0;HaplotypeScore=213.5137;InbreedingCoeff=-0.2597;MQ=30.91;MQ0=38;MQRankSum=-2.314;QD=2.76;ReadPosRankSum=-1.867;VQSLOD=2.3269;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:18,0:15:43.45:43,0,209	0/0:6,0:5:9.01:0,9,105	0/0:57,0:9:25.93:0,26,387	0/0:59,0:3:2.63:0,3,37	0/1:18,1:18:33.09:33,0,48	0/1:17,1:18:20.57:21,0,201	0/1:27,3:28:93.34:136,0,93	0/0:40,0:38:77.81:0,78,2102	0/1:16,0:16:10.53:11,0,240	0/1:23,0:22:64.74:65,0,333	0/0:12,0:12:3.48:0,3,42	0/1:18,0:16:4.22:4,0,215	0/1:16,0:16:49.08:49,0,207	0/1:19,0:18:21.70:22,0,293	0/0:20,0:20:33.11:0,33,814	0/0:12,1:13:13.81:0,14,204	0/1:17,0:14:73.42:73,0,262	0/1:12,0:11:44.13:44,0,88	0/0:11,0:9:26.06:0,26,283	0/1:15,1:15:99:131,0,102	1/1:20,6:23:7.92:202,8,0	0/1:16,0:15:95.86:96,0,106	0/0:17,0:16:9.04:0,9,116	1/1:13,1:12:5.44:51,5,0	0/1:24,0:23:20.99:21,0,245	0/0:9,1:9:20.32:0,20,236	0/0:16,0:15:16.01:0,16,270	0/1:7,0:7:11.15:11,0,87
chr10	25318085	.	TGC	T	1094.55	PASS	AB=0.987;AC=37;AF=0.661;AN=56;BaseQRankSum=9.618;DP=562;FS=9.242;HRun=0;HaplotypeScore=204.2936;InbreedingCoeff=0.0176;MQ=30.94;MQ0=34;MQRankSum=-7.359;QD=2.81;ReadPosRankSum=3.317;VQSLOD=1.3420;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:17,0:15:21:21,0,160	1/1:5,0:5:4.71:22,5,0	0/0:57,0:9:20.07:0,20,262	0/0:59,0:5:5.99:0,6,76	1/1:18,1:18:8.61:31,9,0	1/1:18,0:18:1.62:73,2,0	1/1:30,0:28:26.25:128,26,0	0/0:36,0:34:78.15:0,78,1629	1/1:16,0:16:11.51:65,12,0	0/1:21,2:22:99:189,0,113	1/1:12,0:12:1.19:3,1,0	0/1:18,0:16:10.35:69,0,10	0/1:15,1:16:14.71:80,0,15	1/1:19,0:18:17.76:73,18,0	0/0:20,0:20:35.84:0,36,644	0/1:13,0:13:25.31:33,0,25	0/1:17,0:14:43.55:44,0,155	0/1:12,0:11:30.20:30,0,69	0/1:10,0:9:16.42:16,0,76	1/1:16,0:15:11.24:42,11,0	1/1:26,0:23:13.67:65,14,0	1/1:14,1:14:14.67:65,15,0	0/1:16,0:15:9.56:10,0,35	1/1:14,0:12:5.75:39,6,0	1/1:24,0:23:2.72:80,3,0	0/1:10,0:9:15.62:16,0,33	1/1:16,0:15:2.68:65,3,0	0/1:7,0:7:8.05:8,0,29
chr10	25318086	.	GCA	G	596.19	PASS	AB=0.920;AC=19;AF=0.339;AN=56;BaseQRankSum=3.284;DP=557;FS=0.000;HRun=0;HaplotypeScore=203.2919;InbreedingCoeff=-0.2335;MQ=31.12;MQ0=34;MQRankSum=-4.616;QD=2.00;ReadPosRankSum=0.057;VQSLOD=2.5384;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:15,1:14:37.55:38,0,168	0/0:5,0:5:6.28:0,6,33	0/0:60,0:9:25.84:0,26,317	0/0:59,0:4:6.02:0,6,83	0/1:18,1:18:10.13:14,0,10	0/1:16,2:18:32.18:32,0,62	0/1:29,1:28:0.25:70,0,0	0/0:37,1:36:65.96:0,66,1853	0/1:13,3:16:19.40:19,0,63	0/1:20,2:21:99:114,0,163	0/0:12,0:12:3.34:0,3,16	0/1:17,1:16:26.23:26,0,100	0/1:16,0:16:16.03:16,0,115	0/1:18,1:18:12.71:13,0,60	0/0:19,0:19:33.11:0,33,617	0/0:13,0:13:6.61:0,7,110	0/1:10,5:14:84.44:84,0,163	0/1:6,2:8:62.33:63,0,62	0/0:9,1:9:11.31:0,11,186	0/1:16,0:15:26.66:59,0,27	1/1:22,2:21:5.83:106,6,0	0/1:14,1:14:22.85:23,0,24	0/0:15,1:15:5.80:0,6,80	1/1:14,0:12:4.89:47,5,0	0/1:24,0:23:16.39:16,0,79	0/0:10,0:9:10.13:0,10,141	0/0:17,0:16:24.99:0,25,162	0/1:6,1:7:14.09:14,0,43
chr10	25318102	.	A	ATGTG	2096.04	PASS	AB=0.991;AC=38;AF=0.679;AN=56;BaseQRankSum=3.643;DP=559;FS=21.656;HRun=0;HaplotypeScore=199.9046;InbreedingCoeff=0.2350;MQ=33.25;MQ0=36;MQRankSum=-1.923;QD=5.70;ReadPosRankSum=2.200;VQSLOD=0.9113;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:15,0:13:11.49:61,0,11	1/1:6,0:6:6.16:47,6,0	0/0:46,0:8:12.04:0,12,181	0/0:48,0:2:6.02:0,6,89	1/1:22,0:21:1.35:62,1,0	1/1:18,0:18:7.19:77,7,0	1/1:26,0:24:5.90:68,6,0	0/0:34,0:29:66.21:0,66,1064	1/1:20,0:19:4.39:59,4,0	0/1:24,0:23:30.63:225,0,31	0/1:14,0:15:0.48:1,0,0	0/1:17,0:16:24.97:39,0,25	0/1:18,0:18:4.43:78,0,4	1/1:19,0:18:0.40:23,0,0	0/0:19,0:17:0.29:0,0,257	1/1:12,0:12:8.81:89,9,0	1/1:9,8:18:20.07:301,20,0	1/1:12,0:10:11.54:186,12,0	1/1:12,0:10:21.63:225,22,0	1/1:17,0:16:3.31:28,3,0	0/0:29,0:23:3.06:0,3,9	1/1:15,0:14:1.41:46,1,0	0/1:18,0:17:9.93:10,0,11	0/0:13,0:11:0.47:0,0,1	1/1:21,0:20:5.69:50,6,0	1/1:17,0:14:19.43:264,19,0	1/1:15,0:14:18.86:229,19,0	1/1:9,0:8:1.28:81,1,0
chr10	25318105	.	TGTGTGA	T	2525.26	PASS	AB=0.969;AC=40;AF=0.714;AN=56;BaseQRankSum=6.216;DP=552;FS=0.000;HRun=0;HaplotypeScore=199.1328;InbreedingCoeff=0.2586;MQ=33.75;MQ0=36;MQRankSum=-3.095;QD=6.11;ReadPosRankSum=0.454;VQSLOD=1.9820;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:15,0:13:32.77:41,0,33	0/1:6,0:6:18.70:19,0,62	0/0:44,0:7:11.93:0,12,91	0/0:44,0:2:5.86:0,6,37	0/1:23,1:23:4.50:127,0,4	0/1:14,2:16:12.32:104,0,12	1/1:25,1:24:16.02:108,16,0	0/0:32,0:27:53.14:0,53,595	1/1:20,0:19:14.49:102,14,0	1/1:24,0:23:37.72:359,38,0	0/1:15,0:15:0.77:9,0,1	0/1:16,2:16:5.61:51,0,6	1/1:17,1:18:28.32:211,28,0	1/1:18,1:18:14.42:125,14,0	0/0:19,0:17:20.95:0,21,200	1/1:12,0:12:15.54:100,16,0	0/1:19,0:18:45.53:46,0,216	0/1:14,0:12:12.17:12,0,202	1/1:14,0:12:25.84:202,26,0	1/1:17,0:16:19.91:136,20,0	1/1:29,0:23:4.19:22,4,0	1/1:13,1:13:10.22:63,10,0	1/1:17,2:17:23.18:243,23,0	1/1:14,0:12:4.82:24,5,0	1/1:18,2:19:15.62:228,16,0	1/1:15,0:12:10.42:152,10,0	1/1:16,0:15:7.84:123,8,0	1/1:9,0:8:2.07:91,2,0
chr10	25318107	.	TGTGA	T	5416.87	PASS	AB=0.872;AC=42;AF=0.750;AN=56;BaseQRankSum=6.920;DP=561;FS=0.561;HRun=0;HaplotypeScore=183.9978;InbreedingCoeff=0.4056;MQ=34.58;MQ0=35;MQRankSum=-3.047;QD=12.63;ReadPosRankSum=-0.512;VQSLOD=4.4991;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:15,0:13:6.91:58,0,7	0/1:5,1:6:2.14:85,0,2	0/0:41,0:6:11.93:0,12,91	0/0:40,0:2:5.86:0,6,37	1/1:21,4:24:32.83:360,33,0	1/1:13,4:17:9.98:225,10,0	1/1:24,2:24:24.96:213,25,0	0/0:32,0:27:54.95:0,55,623	1/1:11,10:19:17.99:265,18,0	1/1:14,9:22:53.62:578,54,0	1/1:7,9:16:17.61:239,18,0	0/1:11,7:16:2.11:99,0,2	1/1:13,5:18:32.87:443,33,0	1/1:17,2:18:14.60:166,15,0	0/0:19,0:17:20.83:0,21,203	1/1:4,8:12:17.97:245,18,0	0/1:20,0:19:60.54:61,0,132	0/1:15,0:13:33.40:33,0,147	0/1:8,9:15:10.33:241,0,10	1/1:13,6:18:26.21:383,26,0	1/1:28,2:24:3.75:65,4,0	1/1:10,4:13:9.90:140,10,0	1/1:17,2:17:23.33:360,23,0	1/1:12,3:13:4.89:63,5,0	1/1:17,4:20:24.68:255,25,0	1/1:15,2:14:17.98:286,18,0	1/1:12,5:16:39.44:395,39,0	1/1:9,0:8:19.77:157,20,0
chr10	25318109	.	TGA	T	3830.43	PASS	AB=1.000;AC=44;AF=0.786;AN=56;BaseQRankSum=8.063;DP=557;FS=0.583;HRun=0;HaplotypeScore=181.4704;InbreedingCoeff=0.5115;MQ=35.07;MQ0=35;MQRankSum=-1.818;QD=8.81;ReadPosRankSum=-0.119;VQSLOD=3.3562;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:14:10.69:73,11,0	1/1:2,4:6:15.44:177,15,0	0/0:36,0:5:11.93:0,12,91	0/0:38,0:2:5.86:0,6,37	1/1:24,1:24:32.50:241,33,0	1/1:19,0:19:35.18:242,35,0	1/1:25,0:23:23.33:152,23,0	0/0:30,0:25:54.73:0,55,604	1/1:18,1:17:17.79:124,18,0	1/1:20,3:22:53.55:404,54,0	1/1:20,0:20:23.30:157,23,0	0/1:18,0:16:2.21:67,0,2	1/1:18,0:18:32.36:243,32,0	1/1:18,0:17:17.44:125,17,0	0/0:18,0:16:20.84:0,21,178	1/1:12,0:12:17.86:130,18,0	0/1:21,0:20:39.98:59,0,40	0/1:15,0:13:57.34:57,0,83	0/1:17,0:15:12.76:181,0,13	1/1:19,0:18:28.36:209,28,0	1/1:30,0:24:5.11:37,5,0	1/1:14,0:13:9.79:76,10,0	1/1:20,0:18:28.97:237,29,0	1/1:17,0:15:4.39:28,4,0	1/1:21,0:20:25.66:167,26,0	1/1:17,0:14:33.97:243,34,0	1/1:17,0:16:38.74:271,39,0	1/1:8,0:7:20.13:130,20,0
chr10	25318111	.	A	AGTGT	651.67	PASS	AB=1.000;AC=26;AF=0.500;AN=52;BaseQRankSum=-6.518;DP=549;FS=0.000;HRun=0;HaplotypeScore=196.8093;InbreedingCoeff=-0.1108;MQ=35.66;MQ0=34;MQRankSum=3.068;QD=1.71;ReadPosRankSum=-4.768;VQSLOD=1.2155;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:16:2.29:0,2,6	0/0:6,0:6:14.61:0,15,101	./.	./.	0/1:23,0:22:5.95:90,0,6	0/1:19,0:19:32.51:74,0,33	1/1:25,0:23:6.77:46,7,0	0/1:32,0:27:0:0,0,0	0/1:19,0:17:9.50:10,0,28	0/1:24,0:23:3.29:3,0,74	1/1:21,0:21:13.05:93,13,0	0/0:17,0:15:3:0,3,25	0/1:17,0:17:5.78:6,0,99	0/1:19,0:18:16.08:29,0,16	1/1:9,9:18:3.01:71,3,0	0/1:11,0:11:0.65:1,0,41	1/1:20,0:19:13.55:96,14,0	0/1:15,0:13:32.61:33,0,97	0/0:17,0:15:5.99:0,6,50	0/1:18,0:17:31.64:62,0,32	0/0:27,0:21:4.06:0,4,19	0/0:14,0:13:4.35:0,4,29	0/1:20,0:17:46.43:65,0,46	1/1:16,0:14:4.99:25,5,0	0/1:21,0:20:10.04:10,0,70	0/1:17,0:14:14.83:47,0,15	0/1:17,0:16:17.36:17,0,40	1/1:8,0:7:3.85:22,4,0
chr10	25318209	.	GTT	G	10160.58	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=4.004;DP=536;FS=1.306;HRun=10;HaplotypeScore=80.0119;InbreedingCoeff=0.9617;MQ=70.76;MQ0=3;MQRankSum=0.188;QD=26.74;ReadPosRankSum=5.448;VQSLOD=4.9464;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:60.12:0,60,851	1/1:0,4:4:12.03:134,12,0	0/0:29,0:19:15.32:0,15,375	0/0:26,0:18:5.44:0,5,337	1/1:5,27:31:78.19:869,78,0	1/1:1,15:16:42.11:468,42,0	1/1:2,15:17:39.09:435,39,0	0/0:24,0:24:54.17:0,54,815	1/1:0,11:11:24.06:267,24,0	1/1:1,24:25:68.74:733,69,0	1/1:4,23:27:63.07:684,63,0	1/1:1,12:13:27.07:301,27,0	1/1:1,15:15:27.07:301,27,0	1/1:1,15:16:41.75:466,42,0	0/0:12,0:13:38.62:0,39,580	1/1:0,14:14:39.11:434,39,0	0/0:19,0:20:53.65:0,54,766	0/0:21,0:21:51.15:0,51,748	1/1:6,12:18:11.50:366,11,0	1/1:2,30:32:87.16:954,87,0	1/1:2,17:19:42.11:468,42,0	1/1:1,18:19:51.13:569,51,0	1/1:3,11:14:42.08:449,42,0	1/1:3,10:13:21.05:234,21,0	1/1:3,18:21:51.12:569,51,0	1/1:2,16:18:48.11:523,48,0	1/1:2,23:25:63.16:702,63,0	1/1:0,10:10:21.06:234,21,0
chr10	25318424	.	T	TAC	21633.33	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-3.631;DP=554;FS=3.350;HRun=0;HaplotypeScore=83.3251;InbreedingCoeff=0.9853;MQ=81.60;MQ0=0;MQRankSum=-5.884;QD=46.62;ReadPosRankSum=6.056;VQSLOD=6.4015;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:36.11:0,36,511	1/1:0,5:5:9.03:150,9,0	0/0:17,0:17:27.60:0,28,550	0/0:16,0:17:47.55:0,48,571	1/1:2,20:22:48.16:872,48,0	1/1:0,32:32:90.31:1684,90,0	1/1:3,20:23:51.17:954,51,0	0/0:24,0:24:63.21:0,63,910	1/1:0,18:18:48.16:899,48,0	1/1:3,19:23:60.21:1117,60,0	1/1:0,21:21:48.16:897,48,0	1/1:1,17:18:48.16:899,48,0	1/1:0,19:19:51.17:955,51,0	1/1:1,14:15:39.13:730,39,0	0/0:19,0:19:51.16:0,51,732	1/1:0,17:17:42.14:786,42,0	1/1:1,27:30:60.21:1123,60,0	1/1:1,17:19:54.19:1000,54,0	1/1:0,16:16:48.14:840,48,0	1/1:2,17:19:41.16:835,41,0	1/1:1,21:22:51.17:955,51,0	1/1:2,11:12:21.07:393,21,0	1/1:0,21:21:57.07:1065,57,0	1/1:3,18:21:51.17:955,51,0	1/1:0,17:17:45.15:841,45,0	1/1:0,32:32:93.05:1722,93,0	1/1:0,28:30:75.26:1403,75,0	1/1:0,10:10:30.10:561,30,0
chr10	25319581	.	AACACAC	A	42.02	PASS	AB=0.765;AC=5;AF=0.114;AN=44;BaseQRankSum=-0.361;DP=424;FS=5.368;HRun=0;HaplotypeScore=108.8157;InbreedingCoeff=0.3963;MQ=68.98;MQ0=13;MQRankSum=-1.780;QD=1.14;ReadPosRankSum=0.174;VQSLOD=1.8290;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:0.47:0,0,1	0/0:6,0:6:2.95:0,3,77	./.	./.	0/0:13,0:13:14.99:0,15,195	0/0:25,0:23:21.05:0,21,518	0/0:18,0:18:15.05:0,15,317	./.	./.	0/0:13,0:12:9.03:0,9,267	0/0:19,0:20:6.01:0,6,108	0/0:15,0:15:9.03:0,9,165	0/0:14,0:13:15.05:0,15,310	0/0:18,0:18:6.02:0,6,165	0/1:9,4:13:13.45:54,0,13	0/0:12,0:12:14.97:0,15,201	1/1:14,0:14:2.99:26,3,0	1/1:8,0:9:6:65,6,0	./.	0/0:16,0:16:12.04:0,12,318	0/0:10,0:10:18.06:0,18,391	0/0:10,0:10:2.85:0,3,79	0/0:19,0:18:11.91:0,12,287	0/0:23,0:22:21.07:0,21,493	0/0:18,0:17:14.99:0,15,280	0/0:15,0:15:12:0,12,202	0/0:13,0:12:5.50:0,5,126	./.
chr10	25319637	.	C	CAA	5926.95	PASS	AB=0.774;AC=38;AF=0.679;AN=56;BaseQRankSum=-1.755;DP=486;FS=4.995;HRun=3;HaplotypeScore=86.8597;InbreedingCoeff=0.6802;MQ=65.32;MQ0=15;MQRankSum=0.626;QD=17.03;ReadPosRankSum=0.192;VQSLOD=1.9273;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:41.69:0,42,321	1/1:5,0:5:9.02:98,9,0	0/0:25,0:16:35.15:0,35,362	0/0:30,0:17:34.16:0,34,380	1/1:19,0:19:38.88:350,39,0	0/1:24,0:22:10.49:239,0,10	1/1:23,0:23:45.38:390,45,0	0/0:14,0:13:35.95:0,36,308	1/1:12,0:12:27.90:243,28,0	0/1:18,1:18:4.24:350,0,4	1/1:19,1:19:47.23:424,47,0	1/1:19,0:19:28.48:252,28,0	1/1:17,0:16:34.41:277,34,0	0/1:2,12:15:15.73:48,0,16	0/0:13,0:13:26.97:0,27,225	1/1:11,0:10:22.11:199,22,0	0/0:26,0:26:59.10:0,59,424	0/0:10,0:10:20.77:0,21,152	1/1:26,0:26:62.94:560,63,0	1/1:15,0:15:36.51:387,37,0	1/1:18,0:15:38.88:377,39,0	1/1:10,0:10:24.03:248,24,0	1/1:15,0:15:27.88:266,28,0	1/1:22,0:21:44:412,44,0	0/1:8,12:22:11.38:48,0,11	1/1:5,17:21:51.77:451,52,0	1/1:12,0:11:27.90:256,28,0	1/1:2,0:2:6:52,6,0
chr10	25320282	.	GT	G	9087.12	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=7.229;DP=532;FS=0.846;HRun=9;HaplotypeScore=53.1362;InbreedingCoeff=0.9301;MQ=57.41;MQ0=2;MQRankSum=3.847;QD=22.89;ReadPosRankSum=2.799;VQSLOD=5.6583;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:2,0:18:42.74:0,43,222	1/1:0,8:8:18.01:165,18,0	0/0:11,0:4:6.02:0,6,69	0/0:11,0:6:5.98:0,6,54	1/1:2,18:20:51.01:465,51,0	1/1:2,21:23:57.03:522,57,0	1/1:2,13:15:33:302,33,0	0/0:22,1:23:38.72:0,39,683	1/1:7,15:22:45.02:412,45,0	1/1:1,17:18:19.41:432,19,0	1/1:4,20:24:60.02:549,60,0	1/1:3,14:17:42.01:384,42,0	1/1:0,12:12:36.02:330,36,0	1/1:1,17:18:51.03:467,51,0	0/0:37,0:38:99:0,102,1177	1/1:0,15:15:42.02:384,42,0	0/0:23,0:23:62.59:0,63,681	0/0:10,0:10:27.08:0,27,312	1/1:5,14:16:4.39:290,4,0	1/1:2,37:39:99:960,105,0	1/1:0,12:12:36.02:330,36,0	1/1:0,26:26:69.03:631,69,0	1/1:3,24:27:66.03:604,66,0	1/1:3,5:8:15.01:137,15,0	1/1:0,14:14:42.02:384,42,0	1/1:7,20:27:60.02:549,60,0	1/1:2,22:24:60.03:549,60,0	1/1:1,8:9:26.98:240,27,0
chr10	25320463	.	AT	A	9368.78	PASS	AB=0.556;AC=41;AF=0.732;AN=56;BaseQRankSum=2.173;DP=546;FS=1.716;HRun=9;HaplotypeScore=64.4041;InbreedingCoeff=0.8927;MQ=75.01;MQ0=0;MQRankSum=-1.230;QD=23.78;ReadPosRankSum=4.270;VQSLOD=5.6154;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:54.11:0,54,598	0/1:1,4:5:22.45:70,0,22	0/0:16,0:13:10.82:0,11,230	0/0:20,0:17:31.27:0,31,444	1/1:1,24:25:66.03:604,66,0	1/1:1,23:24:57.03:522,57,0	1/1:2,10:12:30.01:275,30,0	0/0:33,0:33:75.69:0,76,867	1/1:2,14:16:42.02:384,42,0	1/1:1,29:30:84:758,84,0	1/1:3,24:27:66.02:604,66,0	1/1:1,16:17:45.02:412,45,0	1/1:2,17:19:45.02:412,45,0	1/1:2,23:25:69.03:632,69,0	0/0:24,0:24:57.17:0,57,658	1/1:1,18:19:51.02:467,51,0	0/0:24,0:24:66.13:0,66,736	0/0:14,0:14:32.80:0,33,336	1/1:1,8:9:10.43:203,10,0	1/1:2,28:30:72.02:659,72,0	1/1:0,9:9:24.01:220,24,0	1/1:1,15:17:47.06:418,47,0	1/1:1,15:16:45.02:412,45,0	1/1:1,14:15:17:356,17,0	1/1:1,20:21:60.03:549,60,0	1/1:0,20:20:60.01:543,60,0	1/1:3,20:23:54.02:494,54,0	1/1:1,14:15:35.47:375,35,0
chr10	25321729	.	A	AG	16141.21	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=-11.465;DP=611;FS=28.410;HRun=0;HaplotypeScore=56.2970;InbreedingCoeff=0.9996;MQ=74.67;MQ0=5;MQRankSum=-2.948;QD=38.62;ReadPosRankSum=4.401;VQSLOD=2.9460;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,99,1326	1/1:1,12:13:36.04:500,36,0	0/0:16,0:14:36.08:0,36,443	0/0:24,0:22:48.12:0,48,608	1/1:0,25:25:72.11:1000,72,0	1/1:2,14:15:42.08:595,42,0	1/1:2,13:14:33.11:483,33,0	0/0:42,0:42:99:0,126,1632	1/1:1,25:26:66.22:964,66,0	1/1:0,28:28:84.23:1155,84,0	1/1:1,14:14:39.13:570,39,0	1/1:1,18:19:51.17:746,51,0	1/1:0,20:19:48.16:701,48,0	1/1:0,22:22:51.17:746,51,0	0/0:36,0:36:99:0,108,1424	1/1:1,16:17:39.13:571,39,0	0/0:28,0:28:84.26:0,84,1138	0/0:12,0:12:36.08:0,36,452	1/1:2,22:24:72.22:997,72,0	1/1:0,19:20:60.13:842,60,0	1/1:0,21:21:54.18:790,54,0	1/1:0,23:23:66.07:912,66,0	1/1:0,23:23:69.23:1010,69,0	1/1:1,15:15:33.11:483,33,0	1/1:0,15:15:45.15:659,45,0	1/1:0,27:27:81.24:1147,81,0	1/1:2,22:24:60.20:876,60,0	1/1:0,9:9:27.09:395,27,0
chr10	25322102	.	TTA	T	7259.52	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=2.700;DP=318;FS=1.255;HRun=0;HaplotypeScore=45.5412;InbreedingCoeff=0.8314;MQ=75.05;MQ0=1;MQRankSum=2.051;QD=31.43;ReadPosRankSum=3.881;VQSLOD=6.4076;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:8:24.08:0,24,390	1/1:2,6:8:15.05:191,15,0	0/0:11,0:8:5.98:0,6,68	0/0:10,0:6:11.86:0,12,96	1/1:14,11:25:57.17:705,57,0	1/1:7,11:18:48.13:585,48,0	1/1:0,3:3:9.03:115,9,0	0/0:32,0:32:78.26:0,78,1267	1/1:0,6:6:12.04:153,12,0	1/1:7,10:17:48.14:590,48,0	1/1:4,7:11:30.10:381,30,0	1/1:1,3:4:9.03:115,9,0	1/1:2,11:13:30.10:382,30,0	1/1:1,8:9:18.06:229,18,0	0/0:4,0:7:9:0,9,80	1/1:0,5:5:15.05:191,15,0	0/0:5,0:10:13.74:0,14,101	0/0:6,0:9:12:0,12,114	1/1:3,9:12:36.12:458,36,0	1/1:6,7:13:30.07:354,30,0	1/1:0,2:2:3.01:38,3,0	1/1:3,1:4:3.01:38,3,0	1/1:0,11:11:27.09:344,27,0	1/1:0,1:1:3.01:38,3,0	1/1:3,8:11:33.09:406,33,0	1/1:5,8:12:30.10:382,30,0	1/1:1,25:26:69.22:878,69,0	1/1:1,18:19:54.17:687,54,0
chr10	25322116	.	G	GTA	421.65	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=0.544;DP=325;FS=0.000;HRun=0;HaplotypeScore=74.5670;InbreedingCoeff=0.7225;MQ=66.75;MQ0=1;MQRankSum=-1.990;QD=16.87;ReadPosRankSum=0.676;VQSLOD=3.4013;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:24.08:0,24,308	0/0:6,0:6:15.05:0,15,186	0/1:7,0:4:0:0,0,0	0/0:9,0:5:8.69:0,9,75	0/0:24,0:24:48.11:0,48,557	0/0:16,0:16:27.23:0,27,434	0/0:5,0:5:15.05:0,15,189	0/0:38,0:38:99:0,99,1235	0/0:6,0:6:15.05:0,15,187	0/0:17,0:17:42.13:0,42,521	0/0:14,0:14:33.09:0,33,394	0/0:5,0:5:12.04:0,12,149	0/0:11,0:11:30.09:0,30,364	0/0:8,0:8:21.07:0,21,262	0/0:6,0:6:9.70:0,10,116	0/0:7,0:7:21.04:0,21,236	1/1:9,4:13:21.03:302,21,0	1/1:0,5:5:15.05:235,15,0	0/0:16,0:16:36.11:0,36,443	0/0:7,0:7:21.07:0,21,260	0/0:2,0:2:3.01:0,3,37	0/0:2,0:2:6.02:0,6,76	0/0:14,0:14:39.11:0,39,475	0/0:2,0:2:6.01:0,6,62	0/0:14,0:14:39.10:0,39,463	0/0:13,0:12:27.09:0,27,341	0/0:28,0:27:78.24:0,78,963	0/0:20,0:20:60.19:0,60,735
chr10	25322195	.	C	CA	9461.60	PASS	AB=1.000;AC=43;AF=0.768;AN=56;BaseQRankSum=-10.578;DP=382;FS=0.000;HRun=7;HaplotypeScore=43.2928;InbreedingCoeff=0.8675;MQ=72.48;MQ0=0;MQRankSum=-0.596;QD=31.86;ReadPosRankSum=2.994;VQSLOD=4.4947;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:45.06:0,45,429	1/1:1,4:5:12.04:145,12,0	0/0:7,0:7:15.02:0,15,145	0/1:7,0:7:18.81:19,0,77	1/1:2,23:25:72.22:868,72,0	1/1:2,17:19:51.16:616,51,0	1/1:2,6:8:18.06:217,18,0	0/0:24,0:24:57.08:0,57,550	1/1:0,8:8:24.07:290,24,0	1/1:2,20:22:60.16:700,60,0	1/1:1,25:26:75.18:879,75,0	1/1:0,8:8:21.06:254,21,0	1/1:0,15:15:45.14:544,45,0	1/1:3,5:8:21.06:254,21,0	0/0:15,0:15:45.07:0,45,435	1/1:0,7:7:21.06:254,21,0	0/0:2,0:18:30.55:0,31,90	0/0:1,0:6:9.97:0,10,29	1/1:1,16:17:48.11:555,48,0	1/1:1,15:16:45.14:544,45,0	1/1:0,5:5:9.03:109,9,0	1/1:1,12:13:36.11:435,36,0	1/1:2,7:9:24.07:290,24,0	1/1:0,9:9:27.08:326,27,0	1/1:2,14:16:42.60:509,43,0	1/1:5,13:18:42.13:505,42,0	1/1:8,17:25:66.20:788,66,0	1/1:2,8:10:30.09:362,30,0
chr10	25323327	.	CTCTCTGTCTCTG	C	12413.72	PASS	AB=0.879;AC=43;AF=0.768;AN=56;BaseQRankSum=4.437;DP=538;FS=0.000;HRun=0;HaplotypeScore=212.2676;InbreedingCoeff=0.5973;MQ=55.42;MQ0=13;MQRankSum=0.240;QD=31.03;ReadPosRankSum=4.922;VQSLOD=3.6767;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:19,0:19:10.27:17,0,10	1/1:2,0:2:6.02:194,6,0	0/0:35,0:23:4.40:0,4,156	0/0:27,0:16:11.39:0,11,193	1/1:16,0:16:12.04:359,12,0	1/1:24,0:23:35.49:857,35,0	1/1:19,0:18:30.08:694,30,0	0/0:37,0:35:54.18:0,54,1445	1/1:19,0:19:45.13:1136,45,0	1/1:12,14:25:39.13:919,39,0	1/1:6,12:18:3.48:71,3,0	1/1:17,0:16:33.11:900,33,0	1/1:28,0:28:54.18:1376,54,0	1/1:27,0:27:33.08:769,33,0	0/0:27,0:27:27.08:0,27,769	1/1:18,0:19:48.16:1358,48,0	0/0:12,0:11:6:0,6,63	1/1:2,0:2:2.94:18,3,0	0/1:14,0:14:7.11:333,0,7	1/1:12,11:23:6.02:124,6,0	1/1:19,0:18:17.67:243,18,0	1/1:14,0:14:9.03:255,9,0	0/1:6,8:14:0:0,0,0	1/1:21,0:21:8.28:200,8,0	1/1:9,0:9:15.05:408,15,0	1/1:7,20:25:53.99:1294,54,0	1/1:16,0:16:27.09:695,27,0	1/1:6,0:6:6.02:192,6,0
chr10	25323333	.	G	GTC	81.66	PASS	AB=0.908;AC=8;AF=0.143;AN=56;BaseQRankSum=5.806;DP=539;FS=0.000;HRun=0;HaplotypeScore=191.1262;InbreedingCoeff=0.3245;MQ=51.01;MQ0=15;MQRankSum=-5.660;QD=1.02;ReadPosRankSum=-2.107;VQSLOD=2.4326;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:18:4.58:90,5,0	0/1:2,0:2:7.57:8,0,35	0/0:28,0:16:20.63:0,21,337	0/0:24,0:13:13.98:0,14,244	0/0:15,0:15:12.04:0,12,164	0/0:24,0:23:41.96:0,42,567	0/0:19,0:16:32.84:0,33,423	0/0:38,0:36:99:0,99,1174	0/1:21,0:21:47.35:47,0,386	0/1:23,0:22:34.30:34,0,426	0/0:18,0:18:9.03:0,9,122	0/0:17,0:16:13.66:0,14,364	0/0:30,0:30:19.10:0,19,742	0/0:27,0:27:23.18:0,23,626	0/0:30,0:30:39.07:0,39,467	0/0:20,0:21:13.18:0,13,468	0/1:4,7:11:0.97:8,0,1	1/1:3,0:3:2.96:19,3,0	0/0:11,0:11:18.23:0,18,288	0/0:23,0:23:18.05:0,18,244	0/0:21,0:20:24.08:0,24,328	0/0:15,0:15:14.88:0,15,179	0/0:14,0:14:8.66:0,9,101	0/0:20,0:20:8.65:0,9,123	0/0:11,0:11:14.98:0,15,202	0/0:27,0:25:14.89:0,15,498	0/0:19,0:19:7.32:0,7,344	0/0:7,0:6:11.97:0,12,140
chr10	25323337	.	CTG	C	939.92	PASS	AB=0.931;AC=16;AF=0.286;AN=56;BaseQRankSum=5.386;DP=557;FS=1.794;HRun=0;HaplotypeScore=193.9923;InbreedingCoeff=-0.2367;MQ=48.73;MQ0=19;MQRankSum=-4.952;QD=3.29;ReadPosRankSum=-3.382;VQSLOD=2.3649;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:7,11:17:14.87:207,15,0	0/1:2,0:2:9.94:10,0,25	0/0:24,0:12:28.42:0,28,385	0/0:21,0:11:8.33:0,8,298	0/0:15,1:16:11.79:0,12,94	0/0:23,2:24:19.93:0,20,469	0/0:18,3:18:7.27:0,7,303	0/0:44,0:40:99:0,111,1751	0/1:19,2:21:99:118,0,180	0/1:23,1:23:99:130,0,287	0/0:17,2:18:8.74:0,9,84	0/1:18,1:18:40.49:40,0,218	0/1:28,3:31:61.48:61,0,448	0/1:25,3:28:31.37:31,0,477	0/0:31,0:31:39.07:0,39,607	0/1:21,3:24:95.68:96,0,226	0/1:11,1:11:14.50:19,0,14	0/0:3,0:3:1.25:0,1,3	0/1:9,2:11:39.07:39,0,201	0/0:18,4:22:17.81:0,18,215	0/0:19,2:20:24.07:0,24,325	0/1:16,1:16:8.36:8,0,153	0/0:11,1:12:8.69:0,9,120	0/1:18,4:22:15.17:15,0,72	0/0:9,3:12:13.47:0,13,74	0/1:31,0:28:99:147,0,210	0/1:17,1:18:99:138,0,218	0/1:8,0:7:38.54:39,0,102
chr10	25323345	.	GTC	G	5071.16	PASS	AB=0.799;AC=24;AF=0.429;AN=56;BaseQRankSum=4.857;DP=547;FS=9.764;HRun=0;HaplotypeScore=182.9759;InbreedingCoeff=-0.3477;MQ=43.82;MQ0=21;MQRankSum=2.239;QD=12.07;ReadPosRankSum=10.084;VQSLOD=2.8255;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:17,0:16:9.10:37,0,9	0/1:2,1:3:12.84:59,0,13	0/0:12,0:4:6.02:0,6,110	0/0:17,0:8:6.81:0,7,177	0/1:12,9:21:47.62:150,0,48	1/1:20,5:24:8.62:385,9,0	0/1:21,5:23:65.33:330,0,65	0/0:40,0:35:99:0,102,1783	0/1:12,9:21:46:419,0,46	0/1:25,1:25:99:392,0,268	1/1:16,2:17:3.48:35,3,0	0/1:13,8:20:99:335,0,130	0/1:15,12:27:6.07:495,0,6	0/1:14,10:25:1.84:283,0,2	0/0:28,0:28:27.08:0,27,456	0/1:14,10:24:99:529,0,154	0/0:13,0:12:5.52:0,6,24	0/0:3,0:3:2.37:0,2,8	0/1:4,6:10:31.99:158,0,32	0/1:21,2:22:34.08:57,0,34	1/1:18,4:20:17.94:193,18,0	0/1:12,5:16:92.67:93,0,149	0/0:13,1:14:8.73:0,9,149	0/1:20,5:24:81.57:82,0,94	0/1:11,1:12:18.82:193,0,19	0/1:31,1:29:99:522,0,155	0/1:9,8:17:60.88:270,0,61	0/1:7,1:6:47.06:54,0,47
chr10	25323349	.	CTG	C	1726.84	PASS	AB=0.998;AC=27;AF=0.482;AN=56;BaseQRankSum=8.870;DP=536;FS=6.994;HRun=0;HaplotypeScore=193.2264;InbreedingCoeff=-0.4170;MQ=43.38;MQ0=21;MQRankSum=2.135;QD=3.98;ReadPosRankSum=9.594;VQSLOD=0.2928;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,7:16:8.85:115,9,0	1/1:3,0:3:4.03:26,4,0	0/0:8,0:3:6.02:0,6,114	0/0:13,0:7:9.99:0,10,127	0/1:23,0:23:38.85:62,0,39	0/1:23,0:22:32.35:113,0,32	0/1:26,0:23:96.39:96,0,157	0/0:41,0:36:99:0,105,1758	0/1:22,0:22:99:160,0,111	0/1:26,0:25:99:129,0,334	0/1:20,1:20:9.07:9,0,25	0/1:21,0:20:99:110,0,198	0/1:27,0:27:75.28:187,0,75	0/1:20,0:20:51.22:87,0,51	0/0:27,0:27:24.07:0,24,429	0/1:25,0:25:99:209,0,205	0/1:13,0:12:0.99:1,0,1	1/1:3,0:3:5.12:19,5,0	0/1:11,0:10:47.69:48,0,85	0/1:21,0:20:21.75:22,0,49	0/1:22,0:20:13.26:42,0,13	0/1:17,0:15:33.05:33,0,194	0/0:13,0:13:8.73:0,9,168	0/1:25,0:24:26.86:27,0,109	1/1:12,0:12:0.18:71,0,0	0/1:32,0:29:99:198,0,215	0/1:16,0:16:93.84:94,0,115	0/1:8,0:6:24.61:27,0,25
chr10	25323351	.	GTCTCTGTCTGTC	G	7575.24	PASS	AB=0.977;AC=36;AF=0.643;AN=56;BaseQRankSum=7.996;DP=535;FS=7.425;HRun=0;HaplotypeScore=237.6841;InbreedingCoeff=0.2509;MQ=43.32;MQ0=21;MQRankSum=0.859;QD=17.95;ReadPosRankSum=9.357;VQSLOD=1.7956;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:17:7.17:26,7,0	1/1:2,1:3:6.02:143,6,0	0/0:7,0:3:5.98:0,6,69	0/0:9,0:5:3.44:0,3,21	1/1:19,2:23:7.43:190,7,0	1/1:22,0:21:25.05:405,25,0	0/1:27,0:24:30.93:337,0,31	0/0:41,0:36:98.72:0,99,1216	1/1:15,6:21:34.71:858,35,0	0/1:25,1:25:99:409,0,100	0/1:20,1:20:9.48:39,0,9	1/1:19,2:20:11.84:540,12,0	1/1:22,3:27:50.76:901,51,0	1/1:16,1:20:24.98:553,25,0	0/0:28,0:28:21.07:0,21,418	1/1:19,5:24:33.69:944,34,0	0/0:15,0:14:5.93:0,6,57	1/1:3,0:3:5.23:35,5,0	0/1:13,0:12:53.07:148,0,53	0/1:20,0:20:15.33:63,0,15	0/1:22,0:20:5.15:51,0,5	0/1:16,1:15:8.08:163,0,8	0/0:13,0:13:8.34:0,8,74	0/1:25,0:24:10.20:87,0,10	1/1:11,1:12:7.21:239,7,0	1/1:31,1:29:4.12:696,4,0	1/1:13,1:16:24.87:573,25,0	1/1:7,1:6:9.96:173,10,0
chr10	25323355	.	CTG	C	2036.94	PASS	AB=0.979;AC=25;AF=0.446;AN=56;BaseQRankSum=9.333;DP=544;FS=16.375;HRun=0;HaplotypeScore=193.5977;InbreedingCoeff=-0.4331;MQ=43.22;MQ0=23;MQRankSum=0.418;QD=4.76;ReadPosRankSum=7.681;VQSLOD=1.0613;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:18:2.23:0,2,18	0/1:4,0:4:13.20:26,0,13	0/0:5,1:2:5.98:0,6,60	0/0:6,0:2:2.97:0,3,20	0/1:22,1:23:23.58:90,0,24	0/1:22,0:22:21.91:162,0,22	0/1:28,0:25:99:115,0,131	0/0:42,0:37:85.33:0,85,1596	0/1:20,1:21:90.15:188,0,90	0/1:28,1:28:99:106,0,346	0/1:21,2:22:8.69:9,0,47	0/1:20,1:20:93.31:132,0,93	0/1:29,1:29:74.26:229,0,74	0/1:20,0:20:69.95:124,0,70	0/0:28,0:28:21.07:0,21,399	0/1:23,0:24:96.43:231,0,96	1/1:14,2:15:5.64:32,6,0	1/1:3,0:3:5.75:56,6,0	0/1:11,0:10:47.32:47,0,119	0/1:20,1:20:23.06:23,0,36	0/1:19,0:16:19.43:19,0,38	0/1:18,0:16:57.15:57,0,124	0/0:14,1:15:14.70:0,15,195	0/1:26,0:24:41.83:42,0,56	1/1:12,0:12:7.55:89,8,0	0/1:33,0:30:99:267,0,213	0/1:15,0:15:83.56:100,0,84	0/1:8,0:6:1.85:51,0,2
chr10	25323361	.	GTC	G	2941.27	PASS	AB=0.793;AC=37;AF=0.740;AN=50;BaseQRankSum=0.462;DP=558;FS=0.000;HRun=0;HaplotypeScore=200.8959;InbreedingCoeff=0.1151;MQ=44.28;MQ0=24;MQRankSum=0.851;QD=6.55;ReadPosRankSum=3.597;VQSLOD=2.9530;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:20:5.68:0,6,41	0/1:4,3:7:17.31:55,0,17	./.	./.	1/1:13,8:22:6.02:67,6,0	1/1:15,8:22:8.83:101,9,0	1/1:22,7:28:27.82:277,28,0	0/0:39,0:34:17.96:0,18,209	1/1:13,7:20:27.07:297,27,0	0/1:22,8:29:13.84:287,0,14	1/1:20,3:22:8.86:76,9,0	1/1:12,4:17:23.49:223,23,0	0/1:24,8:31:17.33:267,0,17	1/1:13,8:22:0.02:129,0,0	./.	1/1:15,9:26:33.18:324,33,0	0/0:16,0:15:10.17:0,10,75	1/1:3,0:3:2.97:20,3,0	1/1:13,1:11:2.28:33,2,0	1/1:18,3:22:6:67,6,0	1/1:19,0:17:0.97:28,1,0	0/1:12,6:15:19.28:129,0,19	0/1:14,1:16:16.01:16,0,206	1/1:20,6:25:17.10:142,17,0	1/1:9,3:12:5.85:47,6,0	1/1:30,5:32:26.33:274,26,0	0/1:11,7:18:0.96:154,0,1	0/1:8,1:6:7.93:79,0,8
chr10	25324226	.	T	TA	862.65	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.640;DP=583;FS=1.662;HRun=4;HaplotypeScore=54.3706;InbreedingCoeff=0.9941;MQ=78.17;MQ0=0;MQRankSum=-1.020;QD=30.81;ReadPosRankSum=2.521;VQSLOD=3.9653;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:81.20:0,81,906	0/0:15,0:15:39.09:0,39,432	0/0:18,0:18:45.02:0,45,491	0/0:9,0:9:17.63:0,18,200	0/0:29,0:29:87.24:0,87,979	0/0:16,0:15:42.12:0,42,476	0/0:21,0:21:48.12:0,48,534	0/0:30,0:30:84.24:0,84,952	0/0:24,0:24:69.20:0,69,782	0/0:18,0:18:48.14:0,48,544	0/0:27,0:27:75.21:0,75,850	0/0:22,0:22:60.17:0,60,680	0/0:19,0:19:57.16:0,57,647	0/0:21,0:21:60.15:0,60,668	0/0:28,0:28:72.18:0,72,805	0/0:18,0:18:48.12:0,48,535	1/1:2,13:15:39.13:533,39,0	1/1:1,12:13:33.11:451,33,0	0/0:15,0:15:45.12:0,45,504	0/0:28,0:28:84.21:0,84,932	0/0:20,0:20:45.13:0,45,510	0/0:18,0:18:51.15:0,51,578	0/0:23,0:23:63.17:0,63,708	0/0:8,0:8:24.01:0,24,247	0/0:21,0:21:63.15:0,63,690	0/0:34,0:34:96.26:0,96,1081	0/0:32,0:32:84.21:0,84,933	0/0:12,0:12:36.10:0,36,408
chr10	25324731	.	G	GT	913.12	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-6.402;DP=583;FS=12.357;HRun=3;HaplotypeScore=56.2931;InbreedingCoeff=0.9986;MQ=85.91;MQ0=0;MQRankSum=-3.769;QD=36.52;ReadPosRankSum=1.580;VQSLOD=3.3281;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,25:25:72.24:1008,72,0	0/0:11,0:11:30.08:0,30,350	0/0:18,0:18:48.14:0,48,567	0/0:21,0:21:60.14:0,60,684	0/0:29,0:29:81.21:0,81,938	0/0:31,0:31:87.27:0,87,1044	0/0:18,0:18:51.14:0,51,600	0/0:26,0:26:78.20:0,78,899	0/0:19,0:19:54.15:0,54,636	0/0:23,0:23:63.13:0,63,720	0/0:24,0:24:54.16:0,54,648	0/0:25,0:25:69.21:0,69,824	0/0:13,0:13:39.12:0,39,468	0/0:13,0:13:30.09:0,30,360	0/0:21,0:21:57.16:0,57,674	0/0:19,0:19:51.16:0,51,612	0/0:15,0:15:39.11:0,39,455	0/0:14,0:14:36.09:0,36,420	0/0:21,0:21:54.15:0,54,637	0/0:26,0:26:75.23:0,75,899	0/0:21,0:21:57.12:0,57,647	0/0:18,0:18:51.15:0,51,603	0/0:25,0:25:75.23:0,75,900	0/0:20,0:20:60.18:0,60,719	0/0:21,0:21:60.15:0,60,695	0/0:24,0:24:66.19:0,66,782	0/0:30,0:30:90.28:0,90,1077	0/0:12,0:12:36.11:0,36,432
chr10	25324767	.	C	CT	1232.75	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-8.086;DP=608;FS=0.000;HRun=4;HaplotypeScore=60.2765;InbreedingCoeff=0.9995;MQ=82.71;MQ0=0;MQRankSum=-3.410;QD=35.22;ReadPosRankSum=0.857;VQSLOD=3.9612;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:81.23:0,81,917	0/0:10,0:10:30.09:0,30,340	0/0:18,0:18:54.12:0,54,593	0/0:24,0:24:51.06:0,51,549	0/0:26,0:26:75.20:0,75,839	0/0:24,0:24:63.18:0,63,715	0/0:23,0:23:66.17:0,66,738	0/0:38,0:38:99:0,105,1176	0/0:15,0:15:42.12:0,42,476	0/0:20,0:20:60.16:0,60,673	0/0:22,0:22:63.18:0,63,714	0/0:25,0:25:66.17:0,66,739	0/0:17,0:17:45.11:0,45,500	0/0:18,0:18:51.15:0,51,579	0/0:15,0:15:45.13:0,45,510	0/0:16,0:16:48.14:0,48,545	1/1:0,21:21:60.20:821,60,0	1/1:0,14:14:39.13:534,39,0	0/0:15,0:15:42.11:0,42,468	0/0:28,0:28:81.20:0,81,905	0/0:28,0:28:75.20:0,75,840	0/0:25,0:25:75.21:0,75,851	0/0:28,0:28:78.22:0,78,884	0/0:21,0:21:57.16:0,57,647	0/0:26,0:26:69.20:0,69,782	0/0:22,0:22:57.16:0,57,647	0/0:25,0:25:69.16:0,69,756	0/0:13,0:13:33.09:0,33,374
chr10	25325512	.	TA	T	496.87	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.749;DP=679;FS=3.823;HRun=11;HaplotypeScore=68.8264;InbreedingCoeff=0.5884;MQ=76.27;MQ0=0;MQRankSum=-2.896;QD=17.75;ReadPosRankSum=0.942;VQSLOD=4.8102;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,1:45:86.46:0,86,1102	0/0:15,0:15:33.07:0,33,345	0/0:17,1:17:4.80:0,5,173	0/0:19,0:19:1.47:0,1,171	0/0:26,1:27:32.33:0,32,511	0/0:25,1:26:42.40:0,42,643	0/0:23,0:23:66.17:0,66,704	0/0:31,0:31:75.17:0,75,792	0/0:23,0:23:51.11:0,51,531	0/0:21,2:23:10.75:0,11,486	0/0:24,1:25:44.44:0,44,635	0/0:24,0:25:62.93:0,63,632	0/0:37,0:37:96.17:0,96,995	0/0:29,0:29:69.05:0,69,701	1/1:4,24:28:71.91:591,72,0	0/0:17,0:17:36.08:0,36,378	0/0:30,2:32:47.71:0,48,702	0/0:20,0:21:59.94:0,60,609	0/0:13,1:14:11.44:0,11,324	0/0:27,0:28:28.92:0,29,607	0/0:12,1:13:5.43:0,5,263	0/0:34,1:35:67.78:0,68,889	0/0:18,0:18:50.33:0,50,512	0/0:23,0:23:63.13:0,63,656	0/0:12,1:13:5.41:0,5,250	0/0:25,0:25:66.17:0,66,703	0/0:35,2:38:37.72:0,38,782	0/0:8,0:8:21.05:0,21,224
chr10	25326059	.	AGAGAGAGAGAGAGAGAG	A	2610.54	PASS	AB=1.000;AC=38;AF=0.704;AN=54;BaseQRankSum=6.411;DP=507;FS=20.867;HRun=0;HaplotypeScore=145.7518;InbreedingCoeff=0.3252;MQ=48.06;MQ0=75;MQRankSum=0.357;QD=7.04;ReadPosRankSum=1.424;VQSLOD=1.5867;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:13:3.01:38,3,0	1/1:4,8:12:3.01:143,3,0	0/0:21,0:8:18.53:0,19,239	0/0:29,0:12:26.73:0,27,315	1/1:16,0:10:2.65:37,3,0	0/1:13,0:6:18.91:32,0,19	1/1:18,0:12:9.03:114,9,0	0/0:26,0:24:48.63:0,49,784	1/1:15,1:16:9.02:259,9,0	1/1:19,0:13:1.55:68,2,0	1/1:10,0:7:6.02:76,6,0	1/1:18,0:13:6.01:76,6,0	1/1:21,0:12:6.01:76,6,0	1/1:18,0:15:5.99:76,6,0	0/0:20,0:18:40.02:0,40,676	1/1:14,0:12:6.02:203,6,0	1/1:19,1:16:5.34:281,5,0	0/1:18,0:10:19.82:67,0,20	1/1:19,0:16:30.35:370,30,0	1/1:21,0:18:6.02:76,6,0	1/1:15,0:8:3.01:38,3,0	./.	0/1:16,0:12:23.11:23,0,139	0/0:16,0:11:3.01:0,3,67	0/1:19,0:13:27.76:67,0,28	1/1:19,0:11:5.85:61,6,0	1/1:26,0:17:23.97:594,24,0	0/0:7,0:4:2.74:0,3,12
chr10	25326061	.	AGAGAGAGAGAGAGAG	A	2724.26	PASS	AB=1.000;AC=41;AF=0.759;AN=54;BaseQRankSum=6.353;DP=511;FS=26.268;HRun=0;HaplotypeScore=135.7009;InbreedingCoeff=0.4672;MQ=48.98;MQ0=76;MQRankSum=-0.178;QD=7.26;ReadPosRankSum=1.678;VQSLOD=1.1014;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:12:6.02:76,6,0	1/1:11,0:11:3.01:111,3,0	0/0:19,0:8:21.54:0,22,279	0/0:28,0:13:4.66:0,5,290	1/1:20,0:12:5.66:76,6,0	1/1:14,0:6:3.01:38,3,0	1/1:18,0:12:9.03:114,9,0	0/0:27,0:25:54.63:0,55,734	1/1:6,11:17:8.41:313,8,0	1/1:19,0:12:3.03:71,3,0	1/1:10,0:7:6.02:76,6,0	1/1:17,0:12:9.03:114,9,0	1/1:21,0:12:6.02:76,6,0	1/1:17,0:14:5.98:76,6,0	0/0:20,0:18:40.01:0,40,626	1/1:16,0:13:9.03:195,9,0	1/1:21,0:16:9.77:255,10,0	1/1:18,0:10:1.42:69,1,0	1/1:22,0:19:38.35:447,38,0	1/1:20,0:17:6.02:76,6,0	1/1:15,0:8:3.01:38,3,0	./.	0/1:16,0:11:18.92:32,0,19	0/0:16,0:10:3.01:0,3,38	1/1:16,0:10:6.02:76,6,0	1/1:19,0:11:5.90:62,6,0	1/1:27,0:17:22.21:486,22,0	0/0:7,0:4:0:0,0,0
chr10	25326075	.	AG	A	3046.56	PASS	AC=42;AF=0.840;AN=50;BaseQRankSum=5.734;DP=417;FS=43.255;HRun=2;HaplotypeScore=49.7317;InbreedingCoeff=0.7038;MQ=58.68;MQ0=85;MQRankSum=-0.787;QD=11.00;ReadPosRankSum=2.805;VQSLOD=-0.5204;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,9:5:9.03:114,9,0	1/1:8,0:8:2.84:14,3,0	0/0:28,0:13:35.91:0,36,478	0/0:35,0:22:41.47:0,41,496	1/1:4,15:10:20.88:267,21,0	1/1:4,6:1:3.01:38,3,0	1/1:6,8:6:18.06:229,18,0	0/0:29,0:28:81.13:0,81,934	1/1:12,0:12:8.69:66,9,0	1/1:3,10:4:12.03:140,12,0	1/1:2,3:2:6.02:76,6,0	1/1:4,7:5:12.04:152,12,0	1/1:5,10:6:12.04:152,12,0	1/1:3,7:6:6.02:76,6,0	0/0:22,0:21:51.17:0,51,677	1/1:3,5:5:8.86:89,9,0	1/1:7,13:14:21.39:226,21,0	1/1:5,8:5:9.01:99,9,0	1/1:2,20:16:45.14:563,45,0	1/1:4,9:7:9.03:114,9,0	1/1:2,10:6:6.02:76,6,0	./.	1/1:2,9:4:4.87:74,5,0	./.	1/1:2,9:4:12.04:152,12,0	1/1:3,10:3:9.03:114,9,0	1/1:7,16:12:32.81:369,33,0	./.
chr10	25326579	.	A	AT	389.92	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-4.458;DP=546;FS=3.459;HRun=8;HaplotypeScore=52.9509;InbreedingCoeff=0.9858;MQ=83.61;MQ0=0;MQRankSum=-1.201;QD=22.94;ReadPosRankSum=-2.874;VQSLOD=3.1532;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:63.47:0,63,745	0/0:9,0:9:21:0,21,192	0/0:18,0:18:38.38:0,38,338	0/0:15,0:15:22.32:0,22,267	0/0:19,0:19:54.03:0,54,494	0/0:27,0:27:78.04:0,78,714	0/0:15,0:15:45.01:0,45,407	0/0:34,0:34:90:0,90,810	0/0:15,0:15:35.28:0,35,322	0/0:23,0:23:63.03:0,63,577	0/0:24,0:24:72.03:0,72,654	0/0:16,0:16:48.03:0,48,439	0/0:21,0:21:54:0,54,488	0/0:16,0:16:45.02:0,45,412	1/1:3,14:17:42.12:485,42,0	0/0:9,0:9:24.01:0,24,219	0/0:25,0:25:71.97:0,72,645	0/0:19,0:19:49.84:0,50,443	0/0:26,0:26:57:0,57,514	0/0:15,0:16:38.05:0,38,335	0/0:13,0:13:33.02:0,33,302	0/0:11,0:11:33.02:0,33,302	0/0:17,0:17:45.01:0,45,407	0/0:27,0:27:66.03:0,66,604	0/0:11,0:11:20.90:0,21,180	0/0:34,0:34:99:0,99,902	0/0:24,0:24:63.03:0,63,577	0/0:15,0:15:39.02:0,39,357
chr10	25326859	.	G	GT	10718.39	PASS	AB=1.000;AC=47;AF=0.839;AN=56;BaseQRankSum=-8.395;DP=542;FS=11.474;HRun=7;HaplotypeScore=53.2729;InbreedingCoeff=0.8219;MQ=79.02;MQ0=2;MQRankSum=-1.830;QD=24.70;ReadPosRankSum=6.595;VQSLOD=3.8485;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:42.05:0,42,399	1/1:0,9:9:24.07:290,24,0	0/0:37,0:27:38.37:0,38,364	0/0:24,0:20:4.74:0,5,185	1/1:3,25:28:68.88:729,69,0	1/1:1,19:20:51.16:616,51,0	1/1:0,14:14:24.07:290,24,0	0/0:25,0:25:54.06:0,54,513	1/1:2,11:13:27.08:326,27,0	1/1:4,27:31:78.04:857,78,0	1/1:2,15:17:32.97:349,33,0	1/1:2,8:11:23.94:268,24,0	1/1:0,12:12:18.06:217,18,0	1/1:1,11:12:30.09:362,30,0	0/1:25,0:25:53.13:75,0,53	1/1:2,19:21:39.12:471,39,0	1/1:3,21:24:48.14:579,48,0	1/1:2,17:19:45.08:526,45,0	1/1:3,13:16:36.03:367,36,0	1/1:3,23:26:66.07:746,66,0	1/1:1,11:12:27.08:326,27,0	1/1:0,14:14:33.10:399,33,0	1/1:1,17:18:48.15:580,48,0	1/1:1,11:12:15.05:181,15,0	1/1:1,21:22:45.14:543,45,0	1/1:2,27:29:81.12:899,81,0	1/1:2,20:22:39.12:471,39,0	1/1:1,6:7:21.06:251,21,0
chr10	25328133	.	AT	A	10827.35	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=6.332;DP=520;FS=2.354;HRun=8;HaplotypeScore=53.2783;InbreedingCoeff=0.9836;MQ=81.77;MQ0=0;MQRankSum=-3.388;QD=24.44;ReadPosRankSum=7.053;VQSLOD=4.5675;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,17:18:51.08:492,51,0	1/1:0,7:7:21.03:203,21,0	0/0:13,0:13:30.09:0,30,357	0/0:19,0:18:25.74:0,26,382	1/1:4,26:30:78.12:753,78,0	1/1:5,19:24:48.07:464,48,0	1/1:2,13:15:30.04:290,30,0	0/0:45,0:45:99:0,111,1313	1/1:0,15:15:42.07:406,42,0	1/1:1,22:23:66.11:637,66,0	1/1:4,17:21:51.08:491,51,0	1/1:1,8:9:24.51:233,25,0	1/1:4,11:15:33.05:319,33,0	1/1:1,15:16:39.06:377,39,0	1/1:2,16:18:42.07:406,42,0	1/1:3,18:21:48.07:464,48,0	1/1:4,15:19:45.07:435,45,0	1/1:0,9:9:24.04:232,24,0	1/1:1,19:20:57.08:544,57,0	1/1:2,18:20:51.08:492,51,0	1/1:1,21:22:51.08:493,51,0	1/1:2,10:12:30.04:289,30,0	1/1:1,13:14:36.06:348,36,0	1/1:2,4:6:12.01:116,12,0	1/1:0,25:25:72.12:695,72,0	1/1:0,22:22:66.11:637,66,0	1/1:4,29:33:84.13:811,84,0	1/1:2,7:9:21.03:203,21,0
chr10	25328760	.	T	TTTTTCAAC	27707.90	PASS	AB=1.000;AC=47;AF=0.839;AN=56;BaseQRankSum=12.146;DP=516;FS=11.506;HRun=0;HaplotypeScore=212.1537;InbreedingCoeff=0.8325;MQ=82.70;MQ0=0;MQRankSum=-13.798;QD=67.09;ReadPosRankSum=4.545;VQSLOD=3.9030;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:12,0:12:24.08:710,24,0	1/1:10,0:10:30.10:898,30,0	0/0:25,0:25:37.75:0,38,1567	0/0:25,0:25:69.07:0,69,1515	1/1:18,0:18:33.06:904,33,0	1/1:21,1:22:45.15:1327,45,0	1/1:22,0:22:31.18:1274,31,0	0/0:24,0:24:63.19:0,63,1575	1/1:15,0:15:30.10:891,30,0	1/1:23,0:23:28.19:1429,28,0	1/1:11,0:11:17.99:464,18,0	1/1:19,0:19:54.19:1634,54,0	1/1:25,0:25:48.25:2036,48,0	1/1:28,0:28:69.24:1998,69,0	0/0:29,0:29:81.27:0,81,2173	1/1:27,0:27:78.27:2311,78,0	1/1:9,0:9:24.08:685,24,0	0/1:11,0:11:28.37:671,0,28	1/1:13,1:14:30.10:923,30,0	1/1:16,1:17:33.11:950,33,0	1/1:14,0:14:21.39:402,21,0	1/1:12,0:12:24.08:699,24,0	1/1:11,0:11:30.10:845,30,0	1/1:20,0:20:51.10:1332,51,0	1/1:7,0:7:6.02:179,6,0	1/1:29,1:30:78.24:2114,78,0	1/1:32,0:32:90.31:2676,90,0	1/1:3,0:4:12.04:354,12,0
chr10	25328763	.	G	GTCAACTTGAC	55085.39	PASS	AB=0.545;AC=47;AF=0.839;AN=56;BaseQRankSum=-6.943;DP=518;FS=3.150;HRun=0;HaplotypeScore=129.1601;InbreedingCoeff=0.8589;MQ=81.91;MQ0=0;MQRankSum=-13.569;QD=132.10;ReadPosRankSum=4.521;VQSLOD=6.0291;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,8:15:36.12:1902,36,0	1/1:3,7:11:30.10:1631,30,0	0/0:25,0:26:25.27:0,25,1858	0/0:23,0:23:62.41:0,62,1873	1/1:5,7:16:30.10:1434,30,0	1/1:2,10:17:42.14:2290,42,0	1/1:4,11:20:42.14:2168,42,0	0/0:25,0:25:75.25:0,75,2237	1/1:5,9:18:42.14:2237,42,0	1/1:14,12:29:84.29:4097,84,0	1/1:7,5:15:36.12:1587,36,0	1/1:3,16:21:57.20:3116,57,0	1/1:5,20:26:75.26:3896,75,0	1/1:1,18:21:57.20:2991,57,0	0/0:27,0:27:81.28:0,81,2746	1/1:1,22:28:72.25:3863,72,0	1/1:2,6:8:21.07:1063,21,0	0/1:2,8:12:14.13:1289,0,14	1/1:3,6:10:27.09:1357,27,0	1/1:10,7:20:45.15:2453,45,0	1/1:4,4:10:24.03:1054,24,0	1/1:4,7:11:33.11:1740,33,0	1/1:3,8:12:36.12:1687,36,0	1/1:2,17:21:57.19:2764,57,0	1/1:3,2:8:15.05:788,15,0	1/1:6,16:26:72.25:3522,72,0	1/1:7,27:36:99:5498,102,0	1/1:3,3:6:12.04:657,12,0
chr10	25328910	.	TGGATTCTA	T	1306.38	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.679;DP=642;FS=0.940;HRun=0;HaplotypeScore=156.4745;InbreedingCoeff=0.9793;MQ=78.34;MQ0=0;MQRankSum=-6.595;QD=52.26;ReadPosRankSum=2.111;VQSLOD=3.1902;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:45.12:0,45,1737	0/0:11,0:11:33.11:0,33,1318	0/0:28,0:28:66.22:0,66,2567	0/0:24,0:23:60.20:0,60,2344	0/0:28,0:28:72.22:0,72,2944	0/0:32,0:32:93.31:0,93,3902	0/0:21,0:21:60.19:0,60,2463	0/0:22,0:22:60.20:0,60,2312	0/0:20,0:20:57.18:0,57,2321	0/0:35,0:35:96.30:0,96,3684	0/0:22,0:22:57.18:0,57,2303	0/0:24,0:24:69.18:0,69,2712	0/0:18,0:18:54.19:0,54,2336	0/0:20,0:20:48.14:0,48,1844	1/1:2,23:25:51.18:1401,51,0	0/0:25,0:25:72.24:0,72,2820	0/0:20,0:20:57.15:0,57,2250	0/0:7,0:7:21.07:0,21,885	0/0:21,0:21:60.17:0,60,2247	0/0:30,0:30:81.26:0,81,3394	0/0:23,0:23:63.22:0,63,2611	0/0:31,0:31:72.22:0,72,2845	0/0:26,0:26:75.24:0,75,2979	0/0:10,0:10:26.98:0,27,1016	0/0:20,0:20:60.20:0,60,2415	0/0:30,0:30:90.27:0,90,3164	0/0:42,0:41:99:0,123,5090	0/0:5,0:5:15.05:0,15,570
chr10	25331731	.	AAGAC	A	1049.12	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-6.430;DP=791;FS=11.910;HRun=0;HaplotypeScore=265.1272;InbreedingCoeff=0.7748;MQ=58.30;MQ0=1;MQRankSum=5.820;QD=22.32;ReadPosRankSum=0.911;VQSLOD=1.6799;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,36:47:69.71:1144,70,0	0/0:6,0:6:6.02:0,6,100	0/0:30,0:25:35.94:0,36,618	0/0:34,0:28:19.14:0,19,507	0/0:29,0:29:36.11:0,36,565	0/0:38,0:38:72.24:0,72,1177	0/0:22,0:22:27.09:0,27,433	0/0:41,0:41:66.21:0,66,1438	0/0:31,0:31:57.08:0,57,954	0/0:32,0:33:57.18:0,57,873	0/0:29,0:29:48.16:0,48,801	0/0:36,0:36:60.20:0,60,1000	0/0:27,0:27:51.17:0,51,854	0/0:30,0:30:51.17:0,51,851	0/0:39,0:39:60.21:0,60,1001	0/0:39,0:39:63.22:0,63,1053	0/0:25,0:25:24.08:0,24,400	0/0:12,0:12:9.02:0,9,120	0/0:18,0:18:27.54:0,28,407	0/0:30,0:30:54.18:0,54,900	0/0:26,0:26:12.04:0,12,200	0/0:46,0:46:57.19:0,57,945	0/0:15,0:15:18.06:0,18,299	0/0:17,0:17:15.03:0,15,225	0/0:18,0:18:36.12:0,36,601	0/0:38,0:38:84.29:0,84,1408	0/0:31,0:31:48.16:0,48,802	0/0:4,0:4:9.03:0,9,138
chr10	25331737	.	G	GACAGACAA	44076.25	PASS	AB=0.606;AC=46;AF=0.821;AN=56;BaseQRankSum=-10.172;DP=928;FS=5.381;HRun=0;HaplotypeScore=173.4985;InbreedingCoeff=0.7432;MQ=56.62;MQ0=1;MQRankSum=-8.945;QD=56.87;ReadPosRankSum=4.322;VQSLOD=4.2585;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:81.69:0,82,1397	1/1:1,7:9:8.99:279,9,0	0/0:36,0:26:50.95:0,51,837	0/0:35,0:28:26.98:0,27,569	1/1:2,27:37:59.82:1598,60,0	1/1:4,35:42:72.25:3063,72,0	1/1:1,22:28:27.09:1120,27,0	0/0:35,0:35:81.23:0,81,1716	1/1:4,26:33:60.16:2451,60,0	1/1:4,26:39:99:2500,99,0	1/1:2,23:30:68.91:2176,69,0	1/1:5,30:41:60.21:2582,60,0	1/1:4,25:35:51.18:2178,51,0	1/1:0,28:36:51.18:2197,51,0	1/1:3,35:42:60.21:2572,60,0	1/1:3,32:44:66.23:2806,66,0	1/1:3,24:30:27.09:1164,27,0	0/1:3,8:18:11.73:225,0,12	1/1:4,16:27:51.66:1615,52,0	1/1:3,27:39:83.91:2533,84,0	1/1:4,23:37:21.03:792,21,0	1/1:11,34:51:89.83:2674,90,0	1/1:1,15:23:20.83:795,21,0	1/1:1,16:25:12.04:517,12,0	1/1:0,18:22:36.12:1552,36,0	1/1:2,31:40:99:4382,120,0	1/1:7,25:42:47.91:2060,48,0	0/1:2,2:4:56.61:247,0,57
chr10	25333011	.	C	CA	684.29	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-3.296;DP=571;FS=0.000;HRun=6;HaplotypeScore=58.7220;InbreedingCoeff=0.9727;MQ=79.08;MQ0=0;MQRankSum=-0.404;QD=28.51;ReadPosRankSum=0.458;VQSLOD=4.1240;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:19:57.13:0,57,581	0/0:12,0:12:36.08:0,36,367	0/0:18,0:17:17.99:0,18,189	0/0:12,0:12:24.05:0,24,241	0/0:30,0:30:81.15:0,81,812	0/0:25,0:25:66.03:0,66,652	0/0:15,0:15:45.10:0,45,459	0/0:36,0:36:90.17:0,90,903	0/0:17,0:17:44.93:0,45,459	0/0:20,0:20:59.71:0,60,581	0/0:32,0:32:90.20:0,90,918	0/0:27,0:27:69.14:0,69,697	0/0:36,0:36:99:0,99,996	0/0:16,0:16:42.08:0,42,423	1/1:2,22:24:63.19:779,63,0	0/0:23,0:23:60.14:0,60,612	0/0:10,0:9:30.07:0,30,306	0/0:5,0:5:15.03:0,15,153	0/0:23,0:23:63.13:0,63,638	0/0:24,0:24:66.15:0,66,673	0/0:20,0:20:54.12:0,54,551	0/0:23,0:23:60.13:0,60,611	0/0:17,0:17:42.03:0,42,415	0/0:13,0:13:33.07:0,33,337	0/0:19,0:19:54.12:0,54,550	0/0:14,0:14:39.09:0,39,399	0/0:31,0:30:78.16:0,78,789	0/0:9,0:9:27.06:0,27,275
chr10	25333099	.	T	TG	21380.53	PASS	AB=1.000;AC=51;AF=0.911;AN=56;BaseQRankSum=-9.546;DP=586;FS=0.000;HRun=1;HaplotypeScore=50.3341;InbreedingCoeff=0.8347;MQ=86.48;MQ0=0;MQRankSum=-7.871;QD=40.11;ReadPosRankSum=6.780;VQSLOD=4.3719;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,17:17:45.15:674,45,0	1/1:0,11:11:30.10:450,30,0	0/0:29,0:29:87.26:0,87,1100	0/1:11,0:10:2.11:2,0,259	1/1:4,31:35:90.30:1349,90,0	1/1:0,30:30:87.29:1304,87,0	1/1:1,9:10:27.09:405,27,0	0/0:24,0:24:66.21:0,66,845	1/1:0,22:22:66.22:989,66,0	1/1:1,36:37:99:1600,111,0	1/1:0,27:27:69.23:1034,69,0	1/1:1,13:14:39.13:585,39,0	1/1:1,26:27:75.25:1122,75,0	1/1:1,14:15:39.13:584,39,0	1/1:1,12:14:42.12:590,42,0	1/1:1,21:22:51.17:764,51,0	1/1:0,11:11:30.10:449,30,0	1/1:0,8:8:21.07:315,21,0	1/1:0,17:17:51.16:744,51,0	1/1:0,35:35:99:1475,99,0	1/1:1,12:13:33.11:495,33,0	1/1:0,31:31:84.28:1259,84,0	1/1:0,28:28:75.25:1124,75,0	1/1:0,13:13:33.11:495,33,0	1/1:1,26:27:75.25:1124,75,0	1/1:0,36:36:99:1594,108,0	1/1:1,19:20:51.17:764,51,0	1/1:0,2:2:6.02:90,6,0
chr10	25333239	.	GC	G	18834.17	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=2.444;DP=585;FS=6.655;HRun=1;HaplotypeScore=61.6563;InbreedingCoeff=0.9926;MQ=93.36;MQ0=0;MQRankSum=-8.095;QD=37.22;ReadPosRankSum=8.212;VQSLOD=4.0165;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,13:13:33.11:461,33,0	1/1:0,8:8:21.07:293,21,0	0/0:23,0:23:59.38:0,59,940	0/0:26,0:26:77.96:0,78,1103	1/1:0,32:32:90.21:1213,90,0	1/1:0,19:19:57.19:795,57,0	1/1:0,16:16:42.14:587,42,0	0/0:30,0:30:90.30:0,90,1416	1/1:0,20:20:51.17:713,51,0	1/1:0,25:25:75.08:1018,75,0	1/1:1,22:23:60.07:783,60,0	1/1:0,16:16:36.12:496,36,0	1/1:0,30:30:84.15:1146,84,0	1/1:0,27:27:75.25:1048,75,0	1/1:0,22:22:57.19:797,57,0	1/1:0,15:15:45.15:629,45,0	1/1:0,18:18:48.16:663,48,0	1/1:0,13:13:33.09:434,33,0	1/1:0,26:26:75.22:997,75,0	1/1:0,24:24:66.22:922,66,0	1/1:0,13:13:39.13:545,39,0	1/1:0,14:14:42.10:565,42,0	1/1:0,26:26:60.20:838,60,0	1/1:0,20:20:54.18:753,54,0	1/1:0,27:27:72.24:1006,72,0	1/1:1,25:26:78.17:997,78,0	1/1:1,27:28:69.23:949,69,0	1/1:0,5:5:15.01:188,15,0
chr10	25333654	.	A	AGTGT	6276.32	PASS	AB=0.844;AC=48;AF=0.889;AN=54;BaseQRankSum=-4.177;DP=558;FS=0.000;HRun=0;HaplotypeScore=118.7163;InbreedingCoeff=0.3879;MQ=68.31;MQ0=8;MQRankSum=2.439;QD=12.78;ReadPosRankSum=0.590;VQSLOD=4.3000;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:31,0:28:15.05:233,15,0	1/1:7,0:9:20.54:258,21,0	0/0:18,0:11:2.22:0,2,7	./.	1/1:24,10:35:20.58:416,21,0	0/1:12,7:22:10.08:266,0,10	1/1:18,5:24:8.71:177,9,0	0/1:23,0:23:17.82:18,0,20	1/1:12,2:15:26.83:457,27,0	1/1:14,6:23:14.72:194,15,0	1/1:8,7:15:11.31:261,11,0	1/1:9,3:16:14.52:236,15,0	1/1:16,2:17:16.70:295,17,0	1/1:9,5:17:12.04:273,12,0	0/0:13,0:21:21.50:0,21,196	1/1:13,1:19:8.72:103,9,0	1/1:18,0:19:14.72:218,15,0	1/1:15,0:15:21.07:338,21,0	1/1:19,0:18:15.04:207,15,0	1/1:18,0:19:8.82:96,9,0	1/1:31,1:31:28.69:496,29,0	1/1:14,1:15:8.04:100,8,0	1/1:4,0:10:5.75:82,6,0	1/1:13,11:24:17.80:365,18,0	1/1:22,3:26:35.86:631,36,0	1/1:22,2:25:22.61:329,23,0	1/1:6,6:14:8.77:153,9,0	1/1:3,0:3:5.81:75,6,0
chr10	25333770	.	AT	A	10305.93	PASS	AB=0.857;AC=51;AF=0.911;AN=56;BaseQRankSum=1.732;DP=545;FS=1.423;HRun=10;HaplotypeScore=92.4570;InbreedingCoeff=0.6763;MQ=75.28;MQ0=0;MQRankSum=-2.414;QD=20.49;ReadPosRankSum=6.337;VQSLOD=4.7881;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,29:33:74.97:651,75,0	1/1:0,10:10:26.99:234,27,0	0/1:10,2:12:25.49:25,0,164	0/0:14,1:17:2.72:0,3,151	1/1:0,22:22:53.96:468,54,0	1/1:3,10:13:26.99:234,27,0	1/1:2,12:14:32.99:286,33,0	0/0:24,1:25:28.09:0,28,538	1/1:2,17:19:50.99:443,51,0	1/1:1,20:21:59.99:521,60,0	1/1:1,25:26:68.98:599,69,0	1/1:0,15:16:38.03:319,38,0	1/1:1,26:27:65.98:573,66,0	1/1:2,15:17:38.99:339,39,0	1/1:3,22:26:59.01:501,59,0	1/1:3,30:33:83.91:720,84,0	1/1:1,18:19:18.73:384,19,0	1/1:1,7:9:17.03:136,17,0	1/1:0,14:14:41.99:363,42,0	1/1:3,16:20:40.98:345,41,0	1/1:1,24:25:62.99:547,63,0	1/1:1,12:13:32.99:287,33,0	1/1:4,16:20:41.97:365,42,0	1/1:1,14:17:46.06:377,46,0	1/1:4,18:23:50.02:423,50,0	1/1:3,16:19:44.95:385,45,0	1/1:1,26:27:68.98:599,69,0	1/1:1,7:8:21:182,21,0
chr10	25334288	.	AAGG	A	24434.65	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=7.159;DP=796;FS=5.440;HRun=0;HaplotypeScore=164.5891;InbreedingCoeff=0.9940;MQ=65.80;MQ0=3;MQRankSum=-4.522;QD=35.52;ReadPosRankSum=8.706;VQSLOD=4.6395;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:10,51:61:99:1868,123,0	1/1:0,11:11:30.10:455,30,0	0/0:32,0:26:47.17:0,47,778	0/0:35,0:28:57.19:0,57,1159	1/1:4,22:26:60.07:818,60,0	1/1:2,15:17:36.12:546,36,0	1/1:3,17:20:45.15:684,45,0	0/0:40,0:40:81.25:0,81,1538	1/1:2,27:29:81.28:1230,81,0	1/1:3,28:31:84.23:1228,84,0	1/1:2,20:22:60.16:886,60,0	1/1:5,30:35:81.27:1231,81,0	1/1:3,30:33:75.25:1138,75,0	1/1:6,29:35:84.16:1274,84,0	1/1:1,32:33:90.30:1357,90,0	1/1:2,36:38:99:1550,102,0	1/1:8,19:27:48.15:710,48,0	1/1:1,14:15:33.11:501,33,0	1/1:6,17:23:51.16:753,51,0	1/1:2,22:24:69.15:997,69,0	1/1:5,31:36:81.27:1231,81,0	1/1:0,27:27:66.22:995,66,0	1/1:5,33:38:85.87:1317,86,0	1/1:5,30:35:72.24:1094,72,0	1/1:1,20:21:51.17:774,51,0	1/1:1,20:21:60.18:885,60,0	1/1:2,22:24:45.06:684,45,0	1/1:0,6:6:15.05:228,15,0
chr10	25336202	.	T	TA	685.46	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-1.903;DP=283;FS=3.865;HRun=8;HaplotypeScore=56.3465;InbreedingCoeff=0.8344;MQ=62.80;MQ0=1;MQRankSum=-3.003;QD=18.53;ReadPosRankSum=-1.055;VQSLOD=3.2211;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,10:14:29.99:318,30,0	0/0:6,0:6:12:0,12,110	0/0:14,0:10:17.34:0,17,137	0/0:8,1:5:8.98:0,9,81	0/0:23,0:23:63.03:0,63,576	0/0:16,0:16:45.02:0,45,412	0/0:4,0:4:3:0,3,27	0/0:24,0:24:60.01:0,60,543	0/0:6,0:6:15.01:0,15,137	0/0:13,0:13:33.01:0,33,300	0/0:14,0:14:24:0,24,220	0/0:6,0:6:15.01:0,15,137	0/0:5,0:5:12.01:0,12,110	0/0:5,0:5:15.01:0,15,137	1/1:3,0:6:11.53:72,12,0	0/0:4,0:4:12.01:0,12,110	1/1:4,8:12:24.07:277,24,0	1/1:1,4:5:15.04:173,15,0	0/0:16,0:13:29.80:0,30,254	0/0:7,0:7:12:0,12,111	0/0:6,0:6:12:0,12,110	0/0:7,0:7:12:0,12,110	0/0:5,0:5:9:0,9,82	0/0:7,0:7:18.01:0,18,165	0/0:15,0:15:36:0,36,325	0/0:18,0:18:38.99:0,39,357	0/0:11,0:12:35.06:0,35,309	0/0:3,0:3:9:0,9,82
chr10	25336226	.	T	TA	7974.68	PASS	AB=1.000;AC=51;AF=0.911;AN=56;BaseQRankSum=-3.669;DP=302;FS=4.022;HRun=5;HaplotypeScore=36.2865;InbreedingCoeff=0.7629;MQ=71.25;MQ0=0;MQRankSum=-2.186;QD=30.09;ReadPosRankSum=3.196;VQSLOD=4.8491;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,9:12:24.08:316,24,0	1/1:0,5:5:14.88:152,15,0	0/1:9,0:6:0.08:0,0,50	0/0:12,0:8:17.76:0,18,160	1/1:1,31:32:84:992,84,0	1/1:0,16:16:42.14:553,42,0	1/1:0,6:6:12.04:158,12,0	0/0:24,0:24:57.10:0,57,586	1/1:0,6:6:15.05:197,15,0	1/1:3,14:17:48.10:562,48,0	1/1:2,13:15:39.08:486,39,0	1/1:0,3:3:9.03:118,9,0	1/1:0,8:8:15.05:197,15,0	1/1:0,9:9:15.05:197,15,0	1/1:0,4:4:12.04:158,12,0	1/1:3,4:7:12.04:157,12,0	1/1:1,9:10:20.98:253,21,0	1/1:3,3:6:6.49:79,6,0	1/1:2,10:11:30.10:392,30,0	1/1:0,9:9:27.02:325,27,0	1/1:0,5:5:15.05:197,15,0	1/1:0,3:3:9.03:118,9,0	1/1:1,8:9:18.06:237,18,0	1/1:1,10:11:24.08:316,24,0	1/1:1,15:16:42.14:553,42,0	1/1:0,17:17:51.17:671,51,0	1/1:2,10:12:30.10:393,30,0	1/1:0,5:5:15.05:197,15,0
chr10	25338862	.	T	TATAA	2410.73	PASS	AC=28;AF=0.737;AN=38;BaseQRankSum=-5.228;DP=232;FS=7.757;HRun=0;HaplotypeScore=47.2745;InbreedingCoeff=0.6138;MQ=56.76;MQ0=1;MQRankSum=2.431;QD=17.99;ReadPosRankSum=-3.496;VQSLOD=1.0470;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:12.04:0,12,185	./.	./.	./.	1/1:8,3:11:9:161,9,0	1/1:8,5:13:18.02:371,18,0	./.	./.	0/0:8,0:8:12.04:0,12,185	1/1:3,4:7:10.28:214,10,0	1/1:3,1:4:3.01:70,3,0	./.	1/1:8,6:14:12.04:281,12,0	1/1:5,5:10:12.04:281,12,0	0/0:5,0:5:3.01:0,3,46	1/1:4,1:5:3.01:70,3,0	0/0:7,0:15:21.02:0,21,196	0/0:5,0:7:6.01:0,6,56	1/1:13,0:12:12.03:220,12,0	./.	1/1:7,1:8:3.01:70,3,0	1/1:5,1:6:3.01:70,3,0	./.	./.	1/1:4,0:7:3.01:52,3,0	1/1:10,4:15:15.03:274,15,0	1/1:8,6:14:9.03:211,9,0	1/1:2,5:7:3.91:203,4,0
chr10	25340377	.	TG	T	2094.99	PASS	AB=0.533;AC=7;AF=0.130;AN=54;BaseQRankSum=10.519;DP=564;FS=1.026;HRun=3;HaplotypeScore=51.8635;InbreedingCoeff=0.8135;MQ=56.92;MQ0=15;MQRankSum=-0.910;QD=25.24;ReadPosRankSum=1.694;VQSLOD=2.9467;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,19:22:25.26:592,25,0	0/0:8,0:8:24.08:0,24,345	0/0:10,0:5:12.04:0,12,164	./.	0/0:28,0:28:81.23:0,81,1111	0/0:22,0:21:63.20:0,63,888	0/0:9,0:9:24.08:0,24,344	0/0:37,0:34:96.32:0,96,1381	0/0:13,0:13:39.12:0,39,544	0/0:28,0:28:78.26:0,78,1108	0/0:23,0:23:63.18:0,63,879	0/0:16,0:16:48.14:0,48,656	0/0:25,0:25:72.18:0,72,977	0/0:18,0:18:54.17:0,54,760	1/1:1,15:16:42.13:520,42,0	0/0:16,0:16:48.16:0,48,690	1/1:3,18:21:7.99:551,8,0	0/1:3,21:24:11.15:574,0,11	0/0:24,0:21:60.20:0,60,854	0/0:31,0:31:90.29:0,90,1277	0/0:17,0:17:51.15:0,51,714	0/0:12,0:12:36.07:0,36,494	0/0:20,0:20:60.19:0,60,837	0/0:20,0:20:57.19:0,57,820	0/0:28,0:28:84.27:0,84,1189	0/0:27,0:27:72.23:0,72,1011	0/0:27,0:25:78.25:0,78,1102	0/0:12,0:11:33.06:0,33,418
chr10	25341851	.	G	GC	24246.26	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-9.786;DP=662;FS=4.162;HRun=0;HaplotypeScore=54.5220;InbreedingCoeff=0.9957;MQ=60.93;MQ0=0;MQRankSum=1.045;QD=41.95;ReadPosRankSum=8.038;VQSLOD=4.1567;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,31:31:72.19:1119,72,0	1/1:0,13:13:39.05:592,39,0	0/0:22,0:21:63.17:0,63,830	0/0:21,0:19:17.76:0,18,659	1/1:1,26:27:72.25:1149,72,0	1/1:1,22:22:57.19:909,57,0	1/1:0,11:11:27.09:426,27,0	0/0:40,0:39:99:0,114,1536	1/1:2,15:17:42.14:670,42,0	1/1:0,25:25:75.19:1095,75,0	1/1:0,21:21:57.11:867,57,0	1/1:0,14:14:42.14:671,42,0	1/1:0,27:27:78.27:1245,78,0	1/1:1,19:20:48.16:764,48,0	1/1:0,19:19:48.16:766,48,0	1/1:0,26:26:66.23:1052,66,0	1/1:2,33:35:96.24:1482,96,0	1/1:1,31:32:93.25:1451,93,0	1/1:0,25:23:69.16:1019,69,0	1/1:1,34:35:99:1538,99,0	1/1:1,17:18:42.14:671,42,0	1/1:0,10:10:24.08:383,24,0	1/1:1,20:21:54.18:853,54,0	1/1:0,15:15:45.15:717,45,0	1/1:0,26:26:72.25:1149,72,0	1/1:2,37:39:99:1786,114,0	1/1:1,33:33:81.28:1287,81,0	1/1:3,11:14:42:587,42,0
chr10	25343069	.	TG	T	10110.80	PASS	AB=0.957;AC=49;AF=0.875;AN=56;BaseQRankSum=-4.424;DP=587;FS=20.635;HRun=10;HaplotypeScore=68.2031;InbreedingCoeff=0.8689;MQ=75.66;MQ0=0;MQRankSum=-3.442;QD=19.04;ReadPosRankSum=6.076;VQSLOD=3.7914;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:22:19.24:0,19,110	1/1:1,7:8:18:156,18,0	0/1:21,1:19:3.34:3,0,209	0/0:19,0:19:10.92:0,11,243	1/1:2,10:12:23.97:208,24,0	1/1:6,18:25:47.02:397,47,0	1/1:1,24:26:59.03:501,59,0	0/0:15,0:15:21.48:0,21,219	1/1:3,23:26:59.98:521,60,0	1/1:7,16:23:44.98:390,45,0	1/1:2,8:10:20.99:182,21,0	1/1:4,20:24:51.46:444,51,0	1/1:3,20:23:59.98:521,60,0	1/1:3,28:31:77.98:677,78,0	1/1:1,17:18:47.99:417,48,0	1/1:1,21:22:30.97:443,31,0	1/1:3,23:27:68.01:579,68,0	1/1:5,21:26:40.78:522,41,0	1/1:6,7:13:23.98:208,24,0	1/1:3,22:26:59.01:500,59,0	1/1:2,33:35:77.98:677,78,0	1/1:3,19:22:50.42:442,50,0	1/1:4,10:14:23.99:208,24,0	1/1:2,23:26:31.58:493,32,0	1/1:1,15:17:38.03:318,38,0	1/1:2,23:25:62.96:543,63,0	1/1:0,23:24:71.02:605,71,0	1/1:0,6:6:18:156,18,0
chr10	25345068	.	TAC	T	8498.38	PASS	AB=0.763;AC=44;AF=0.815;AN=54;BaseQRankSum=1.044;DP=473;FS=2.212;HRun=0;HaplotypeScore=63.2928;InbreedingCoeff=0.7985;MQ=60.22;MQ0=7;MQRankSum=0.275;QD=23.09;ReadPosRankSum=5.762;VQSLOD=5.2342;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:50.19:0,50,278	1/1:0,14:14:36.12:463,36,0	0/1:17,0:2:0.84:1,0,27	./.	1/1:3,26:29:60.19:772,60,0	1/1:2,17:19:36.12:463,36,0	1/1:0,8:8:15.05:193,15,0	0/0:38,0:38:93.18:0,93,1390	1/1:2,7:9:12.04:154,12,0	1/1:0,18:18:51.14:619,51,0	1/1:2,14:16:24.08:309,24,0	1/1:3,10:13:18.06:232,18,0	1/1:2,16:18:39.13:502,39,0	1/1:1,14:15:27.09:347,27,0	1/1:6,15:21:30.08:372,30,0	1/1:1,12:13:27.09:348,27,0	0/0:21,0:20:42.88:0,43,290	0/0:14,0:14:14.90:0,15,157	1/1:5,6:10:18.06:228,18,0	1/1:4,29:33:78.24:990,78,0	1/1:2,10:12:21.07:270,21,0	1/1:2,13:15:30.10:386,30,0	1/1:2,15:17:29.90:386,30,0	1/1:3,4:7:6.02:77,6,0	1/1:0,23:23:48.16:617,48,0	1/1:4,10:14:22.58:375,23,0	0/1:2,19:21:1.52:317,0,2	1/1:1,4:5:6.02:77,6,0
chr10	25345080	.	CGT	C	1194.97	PASS	AB=0.951;AC=9;AF=0.161;AN=56;BaseQRankSum=-4.159;DP=486;FS=0.605;HRun=0;HaplotypeScore=90.9493;InbreedingCoeff=0.6054;MQ=62.87;MQ0=8;MQRankSum=-0.755;QD=12.85;ReadPosRankSum=1.462;VQSLOD=3.3788;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,19:23:51.16:643,51,0	0/0:14,0:14:26.24:0,26,89	0/0:23,0:5:14.99:0,15,155	0/1:14,0:5:4.74:5,0,26	0/0:27,0:27:44.75:0,45,182	0/0:20,0:20:33.91:0,34,233	0/0:9,0:9:16.01:0,16,101	0/0:40,0:40:75.18:0,75,1190	0/0:10,0:10:18.30:0,18,166	0/0:19,0:19:43.04:0,43,258	0/0:18,0:18:31.31:0,31,249	0/0:11,0:11:10.18:0,10,88	0/0:19,0:19:36.02:0,36,218	0/0:16,0:16:22.06:0,22,113	0/0:18,1:19:9.40:0,9,194	0/0:12,0:12:21.09:0,21,76	1/1:4,14:17:39.12:492,39,0	1/1:4,10:14:15.05:189,15,0	0/1:12,0:11:3.62:4,0,134	0/0:31,0:31:33.32:0,33,202	0/0:13,0:13:23.96:0,24,188	0/0:14,0:14:27.55:0,28,136	0/0:18,0:18:30.46:0,30,214	0/0:5,0:4:5.19:0,5,21	0/0:27,0:27:51.50:0,51,317	0/1:10,1:11:10.51:11,0,87	0/0:21,0:21:30.49:0,30,195	0/0:7,0:7:12.94:0,13,109
chr10	25346602	.	TA	T	12586.93	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=6.960;DP=624;FS=9.219;HRun=6;HaplotypeScore=87.6427;InbreedingCoeff=0.9926;MQ=63.85;MQ0=0;MQRankSum=1.010;QD=27.36;ReadPosRankSum=5.716;VQSLOD=4.7069;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:72.23:0,72,935	1/1:1,7:8:18.04:193,18,0	0/0:14,0:13:33.08:0,33,408	0/0:31,0:31:84.10:0,84,1050	1/1:5,31:36:86.88:910,87,0	1/1:2,17:19:33.08:355,33,0	1/1:2,22:24:57.14:613,57,0	0/0:31,0:30:81.26:0,81,1062	1/1:0,21:21:57.14:612,57,0	1/1:1,28:29:84.21:903,84,0	1/1:2,22:24:63.16:677,63,0	1/1:1,19:20:54.14:580,54,0	1/1:2,16:18:48.12:516,48,0	1/1:0,21:21:60.15:645,60,0	0/0:26,0:26:78.25:0,78,1025	1/1:0,16:16:45.02:483,45,0	0/0:19,0:19:54.13:0,54,684	0/0:15,0:15:26.79:0,27,330	1/1:5,17:22:36.86:469,37,0	1/1:1,29:30:81.20:869,81,0	1/1:0,28:28:69.17:742,69,0	1/1:1,24:25:66.16:708,66,0	1/1:0,17:17:48.12:516,48,0	1/1:0,19:19:42.11:451,42,0	1/1:3,21:24:63.16:677,63,0	1/1:1,21:22:63.14:667,63,0	1/1:2,29:31:81.20:871,81,0	1/1:2,4:6:12.03:129,12,0
chr10	25347694	.	TAAAC	T	2159.62	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.558;DP=556;FS=10.072;HRun=0;HaplotypeScore=91.9093;InbreedingCoeff=0.9980;MQ=64.27;MQ0=2;MQRankSum=-2.550;QD=41.53;ReadPosRankSum=3.548;VQSLOD=3.8490;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:63.21:0,63,1613	0/0:11,0:11:33.10:0,33,849	0/0:25,0:22:63.16:0,63,1479	0/0:17,0:17:41.86:0,42,1060	0/0:27,0:27:81.28:0,81,2179	0/0:18,0:18:54.19:0,54,1479	0/0:13,0:13:39.13:0,39,1042	0/0:18,0:18:51.17:0,51,1293	0/0:14,0:14:42.13:0,42,1069	0/0:31,0:31:90.31:0,90,2417	0/0:20,0:20:60.20:0,60,1581	0/0:13,0:13:36.12:0,36,986	0/0:20,0:20:60.21:0,60,1620	0/0:29,0:29:87.30:0,87,2294	1/1:0,16:16:39.13:755,39,0	0/0:18,0:18:54.19:0,54,1479	1/1:1,18:19:39.13:755,39,0	1/1:3,13:17:23.19:792,23,0	0/0:16,0:15:45.15:0,45,1112	0/0:31,0:31:93.32:0,93,2536	0/0:19,0:19:54.19:0,54,1457	0/0:19,0:19:57.20:0,57,1544	0/0:28,0:28:81.28:0,81,2207	0/0:11,0:11:30.10:0,30,821	0/0:23,0:23:66.21:0,66,1720	0/0:26,0:26:78.27:0,78,2052	0/0:27,0:26:81.26:0,81,2139	0/0:8,0:8:24.08:0,24,657
chr10	25348974	.	T	TG	22463.77	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-0.397;DP=646;FS=8.231;HRun=3;HaplotypeScore=82.8674;InbreedingCoeff=0.9984;MQ=62.88;MQ0=1;MQRankSum=-2.234;QD=37.75;ReadPosRankSum=6.300;VQSLOD=4.3874;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,23:25:63.21:878,63,0	1/1:1,9:10:27.09:378,27,0	0/0:10,0:8:24.07:0,24,283	0/0:12,0:13:36.09:0,36,408	1/1:2,30:32:84.28:1174,84,0	1/1:2,29:31:84.28:1168,84,0	1/1:4,23:27:59.53:876,60,0	0/0:28,0:28:63.17:0,63,736	1/1:0,19:19:54.18:756,54,0	1/1:1,28:29:84.28:1174,84,0	1/1:2,18:20:57.19:794,57,0	1/1:1,27:28:75.25:1050,75,0	1/1:1,27:28:78.26:1092,78,0	1/1:0,17:17:51.17:714,51,0	1/1:0,32:32:90.30:1256,90,0	1/1:0,18:18:51.17:714,51,0	1/1:0,18:18:51.17:714,51,0	1/1:1,10:11:33.03:418,33,0	1/1:3,16:18:45.12:596,45,0	1/1:1,22:23:63.21:881,63,0	1/1:0,21:21:57.19:798,57,0	1/1:1,31:32:87.29:1217,87,0	1/1:2,28:29:84.28:1175,84,0	1/1:1,31:32:87.29:1218,87,0	1/1:1,14:15:39.13:544,39,0	1/1:3,32:35:99:1325,99,0	1/1:2,29:31:84.28:1176,84,0	1/1:0,12:12:27.09:378,27,0
chr10	25349966	.	AAAG	A	445.98	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=2.001;DP=581;FS=10.792;HRun=0;HaplotypeScore=140.7589;InbreedingCoeff=0.8610;MQ=75.49;MQ0=1;MQRankSum=-2.634;QD=26.23;ReadPosRankSum=0.476;VQSLOD=3.3436;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,114,2543	0/0:9,0:9:27.09:0,27,612	0/0:25,0:23:50.65:0,51,1065	0/0:27,0:26:71.93:0,72,1455	0/0:25,0:25:72.25:0,72,1624	0/0:21,0:21:60.21:0,60,1353	0/0:30,0:30:81.26:0,81,1748	0/0:26,0:26:72.23:0,72,1537	0/0:21,0:21:63.22:0,63,1424	0/0:31,0:31:93.32:0,93,2068	0/0:26,0:26:72.25:0,72,1632	0/0:21,0:21:63.22:0,63,1428	0/0:22,0:22:66.23:0,66,1494	0/0:15,0:15:45.15:0,45,992	0/0:24,0:24:72.25:0,72,1617	0/0:17,0:17:48.16:0,48,1088	1/1:1,9:10:17.80:299,18,0	1/1:1,6:7:1.04:251,1,0	0/0:10,0:10:27.09:0,27,598	0/0:21,0:21:63.22:0,63,1407	0/0:16,0:16:48.16:0,48,1070	0/0:14,0:14:39.13:0,39,883	0/0:22,0:22:60.19:0,60,1316	0/0:14,0:14:42.14:0,42,952	0/0:14,0:14:42.14:0,42,952	0/0:30,0:30:90.31:0,90,2015	0/0:33,0:33:96.33:0,96,2139	0/0:10,0:9:30.10:0,30,668
chr10	25350081	.	C	CA	317.34	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-2.647;DP=615;FS=9.868;HRun=7;HaplotypeScore=59.6037;InbreedingCoeff=0.9775;MQ=85.51;MQ0=0;MQRankSum=-3.406;QD=18.67;ReadPosRankSum=-0.115;VQSLOD=2.4036;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,114,1100	0/0:9,0:9:24.03:0,24,232	0/0:24,0:25:45.85:0,46,411	0/0:20,0:19:12.98:0,13,282	0/0:24,0:24:66.08:0,66,630	0/0:20,0:20:54.09:0,54,521	0/0:21,0:21:60.05:0,60,561	0/0:30,0:30:75.07:0,75,710	0/0:20,0:21:57.02:0,57,533	0/0:34,0:34:81.13:0,81,782	0/0:29,0:29:75.10:0,75,719	0/0:22,0:22:63.08:0,63,599	0/0:27,0:27:72.11:0,72,694	0/0:22,0:22:60.09:0,60,579	0/0:34,0:34:96.13:0,96,916	0/0:15,0:15:42.07:0,42,405	1/1:2,7:9:18.06:217,18,0	1/1:1,7:8:18.06:217,18,0	0/0:13,0:13:33.05:0,33,318	0/0:32,0:32:90.13:0,90,863	0/0:26,0:26:33.08:0,33,601	0/0:21,0:21:54.06:0,54,510	0/0:19,0:19:51.08:0,51,492	0/0:13,0:13:39.06:0,39,377	0/0:22,0:22:60.08:0,60,571	0/0:20,0:20:57.08:0,57,543	0/0:26,0:26:72.08:0,72,683	0/0:13,0:13:39.06:0,39,377
chr10	25355111	.	G	GGCAAATGCTT	56248.42	PASS	AC=42;AF=0.778;AN=54;BaseQRankSum=-3.904;DP=746;FS=1.902;HRun=0;HaplotypeScore=238.1924;InbreedingCoeff=0.9794;MQ=44.26;MQ0=3;MQRankSum=-16.816;QD=103.59;ReadPosRankSum=-1.499;VQSLOD=4.7786;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:52:99:0,141,4048	1/1:5,6:12:30.10:1473,30,0	0/0:31,0:24:58.53:0,59,1648	0/0:25,0:19:42.14:0,42,1340	1/1:10,35:48:99:5140,117,0	1/1:10,13:22:63.22:3021,63,0	1/1:17,14:29:60.21:2695,60,0	0/0:31,0:31:84.29:0,84,2636	1/1:10,18:34:84.25:4116,84,0	1/1:9,12:22:57.16:2555,57,0	1/1:10,13:24:51.13:2362,51,0	1/1:8,16:25:63.22:2987,63,0	1/1:9,12:21:54.18:2375,54,0	1/1:11,17:29:78.19:3627,78,0	1/1:11,18:33:84.21:3874,84,0	1/1:13,14:28:66.16:2829,66,0	0/0:38,0:38:10.70:0,11,3260	0/0:26,0:26:72.25:0,72,2185	1/1:8,8:13:33.11:1474,33,0	1/1:12,8:21:42.14:1804,42,0	1/1:4,3:7:8.99:319,9,0	1/1:7,21:29:72.24:3494,72,0	1/1:12,10:22:53.97:2091,54,0	1/1:8,9:18:33.11:1363,33,0	1/1:6,12:19:48.16:2357,48,0	1/1:16,14:25:66.22:2992,66,0	1/1:13,16:34:69.24:3299,69,0	./.
chr10	25357118	.	C	CT	5849.89	PASS	AB=0.795;AC=44;AF=0.815;AN=54;BaseQRankSum=3.714;DP=450;FS=3.604;HRun=10;HaplotypeScore=84.7086;InbreedingCoeff=0.7334;MQ=75.78;MQ0=0;MQRankSum=-3.258;QD=15.48;ReadPosRankSum=4.248;VQSLOD=5.4897;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,18:22:48.12:512,48,0	1/1:6,0:6:14.72:92,15,0	0/0:13,0:12:17.90:0,18,147	0/0:11,0:11:23.89:0,24,189	1/1:31,0:31:48.91:404,49,0	1/1:28,0:28:73.24:433,73,0	0/1:8,0:8:28.59:66,0,29	0/0:33,0:35:69.81:0,70,551	1/1:14,0:14:38.17:228,38,0	1/1:31,0:31:57.74:376,58,0	1/1:19,0:19:46.97:281,47,0	1/1:10,0:10:29.32:175,29,0	1/1:16,0:16:44.38:304,44,0	1/1:13,0:13:32.30:194,32,0	0/0:1,0:13:22.41:0,22,65	1/1:9,0:9:23.46:139,23,0	0/1:5,16:23:11.87:367,0,12	1/1:3,8:11:18.05:192,18,0	1/1:21,1:22:51.88:303,52,0	1/1:22,0:22:52.85:317,53,0	1/1:4,0:4:8.87:63,9,0	1/1:13,0:13:32.24:190,32,0	1/1:15,0:15:43.90:255,44,0	1/1:4,0:4:11.73:69,12,0	1/1:19,0:19:52.70:313,53,0	1/1:23,0:23:60.44:324,60,0	1/1:15,0:15:41.21:252,41,0	./.
chr10	25357127	.	T	TG	12007.31	PASS	AB=1.000;AC=45;AF=0.804;AN=56;BaseQRankSum=-2.669;DP=453;FS=1.116;HRun=0;HaplotypeScore=64.4770;InbreedingCoeff=0.6226;MQ=77.07;MQ0=0;MQRankSum=-1.444;QD=31.19;ReadPosRankSum=5.788;VQSLOD=4.6916;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:20,0:20:12.39:57,0,12	1/1:1,9:10:17.97:226,18,0	0/0:10,0:10:16.12:0,16,273	0/0:14,1:15:22.18:0,22,320	1/1:1,28:29:79.43:1053,79,0	1/1:0,28:29:75.24:1032,75,0	1/1:2,8:10:12.47:205,12,0	0/0:29,0:29:84.55:0,85,1062	1/1:1,13:14:39.13:544,39,0	1/1:2,28:30:86.28:1198,86,0	1/1:1,18:19:50.83:674,51,0	1/1:1,10:11:30.10:418,30,0	1/1:0,16:16:45.15:623,45,0	1/1:0,13:13:33.11:460,33,0	0/0:14,0:14:38.12:0,38,234	1/1:0,9:9:24.08:335,24,0	0/1:21,0:21:31.55:32,0,99	0/1:11,0:11:8.72:19,0,9	1/1:3,16:20:30.48:708,30,0	1/1:0,22:22:57.09:770,57,0	1/1:1,3:4:9.03:123,9,0	1/1:0,11:11:33.11:460,33,0	1/1:1,19:20:50.91:662,51,0	1/1:0,5:5:12.04:167,12,0	1/1:0,21:21:54.18:752,54,0	1/1:0,22:22:63.21:878,63,0	1/1:0,17:17:42.14:586,42,0	1/1:1,0:1:3:25,3,0
chr10	25357953	.	TTGA	T	10473.91	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=9.148;DP=333;FS=3.741;HRun=0;HaplotypeScore=73.1588;InbreedingCoeff=0.9450;MQ=81.96;MQ0=0;MQRankSum=-5.868;QD=43.10;ReadPosRankSum=1.933;VQSLOD=6.3347;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:69.22:0,69,1547	1/1:0,4:4:12.04:203,12,0	0/0:14,0:14:16.44:0,16,652	0/0:14,0:13:25.33:0,25,592	1/1:2,10:12:33.11:554,33,0	1/1:2,13:14:36.12:610,36,0	1/1:0,14:14:42.14:716,42,0	0/0:12,0:12:30.10:0,30,692	1/1:0,12:12:33.11:563,33,0	1/1:2,13:15:39.13:662,39,0	1/1:2,6:8:15.05:256,15,0	1/1:1,9:10:27.09:459,27,0	1/1:3,11:14:36.12:611,36,0	1/1:1,14:15:42.14:715,42,0	0/0:13,0:13:39.12:0,39,855	1/1:2,8:10:24.08:409,24,0	0/0:8,0:8:24.08:0,24,546	0/0:5,0:5:12.04:0,12,247	1/1:0,4:4:12.04:205,12,0	1/1:1,8:9:24.08:409,24,0	1/1:1,19:20:41.82:714,42,0	1/1:0,13:13:33.07:529,33,0	1/1:1,17:18:39.13:665,39,0	1/1:3,10:13:24.08:409,24,0	1/1:1,9:10:27.09:456,27,0	1/1:0,11:11:33.11:562,33,0	1/1:0,15:15:42.14:716,42,0	1/1:0,1:1:3.01:51,3,0
chr10	25358321	.	G	GA	11762.86	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=-7.496;DP=535;FS=5.618;HRun=6;HaplotypeScore=55.4608;InbreedingCoeff=0.9964;MQ=93.75;MQ0=0;MQRankSum=-1.684;QD=32.58;ReadPosRankSum=4.743;VQSLOD=4.8263;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:78.18:0,78,795	1/1:0,5:5:15.05:189,15,0	0/0:19,0:19:35.95:0,36,355	0/0:29,0:29:66.08:0,66,650	1/1:2,16:18:42.09:510,42,0	1/1:3,23:26:60.19:755,60,0	1/1:1,11:12:27.09:340,27,0	0/0:34,0:34:93.21:0,93,949	1/1:3,17:20:51.16:642,51,0	1/1:2,15:17:45.14:566,45,0	1/1:0,13:13:39.12:491,39,0	1/1:2,13:15:36.12:453,36,0	1/1:0,21:21:60.19:755,60,0	1/1:2,22:24:60.19:755,60,0	0/0:23,0:23:57.11:0,57,575	1/1:0,19:19:51.16:642,51,0	0/0:21,0:21:60.13:0,60,612	0/0:22,0:22:60.10:0,60,601	1/1:1,22:23:66.18:813,66,0	1/1:3,16:19:42.13:528,42,0	1/1:2,22:24:63.20:793,63,0	1/1:0,11:11:30.10:377,30,0	1/1:0,11:11:33.11:415,33,0	1/1:0,9:9:27.09:340,27,0	1/1:0,15:15:39.12:491,39,0	1/1:1,17:18:48.13:589,48,0	1/1:2,29:31:75.24:944,75,0	1/1:0,10:10:30.10:377,30,0
chr10	25358901	.	A	ATAGT	13831.59	PASS	AB=1.000;AC=43;AF=0.768;AN=56;BaseQRankSum=-1.782;DP=708;FS=6.043;HRun=0;HaplotypeScore=120.7866;InbreedingCoeff=0.7699;MQ=71.17;MQ0=2;MQRankSum=2.261;QD=23.72;ReadPosRankSum=3.305;VQSLOD=4.0943;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:20:17.67:0,18,109	1/1:5,5:10:14.92:251,15,0	0/1:17,0:14:1.89:2,0,57	0/0:14,0:11:5.88:0,6,46	1/1:7,30:37:81.01:1618,81,0	1/1:34,1:35:9.02:128,9,0	1/1:12,7:20:9.03:210,9,0	0/0:36,0:36:45.04:0,45,472	1/1:15,18:35:39.13:928,39,0	1/1:18,21:39:63.15:1239,63,0	1/1:16,14:31:41.76:631,42,0	1/1:9,11:22:33.11:771,33,0	1/1:11,18:33:27.09:622,27,0	1/1:12,15:28:21.07:498,21,0	0/0:12,0:36:39.05:0,39,369	1/1:11,18:30:30.10:714,30,0	0/0:1,0:10:8.94:0,9,70	0/0:4,0:9:3:0,3,28	1/1:20,5:25:20.96:282,21,0	1/1:12,25:38:74.83:1304,75,0	1/1:5,14:20:1.21:492,1,0	1/1:10,13:24:30.77:555,31,0	1/1:9,9:20:2.61:427,3,0	1/1:6,14:20:24.08:571,24,0	1/1:11,17:28:42.14:1000,42,0	1/1:10,13:23:39.04:633,39,0	1/1:12,28:40:36.12:848,36,0	1/1:7,0:7:12:106,12,0
chr10	25358933	.	C	CTAGT	14099.08	PASS	AB=1.000;AC=42;AF=0.778;AN=54;BaseQRankSum=3.852;DP=627;FS=2.919;HRun=0;HaplotypeScore=120.4695;InbreedingCoeff=0.4987;MQ=60.17;MQ0=5;MQRankSum=1.138;QD=26.01;ReadPosRankSum=4.505;VQSLOD=4.2949;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:21,0:21:73.97:74,0,189	1/1:8,0:8:14.90:249,15,0	0/0:3,0:2:6.01:0,6,59	./.	1/1:40,0:40:77.34:1595,77,0	1/1:12,23:36:4.88:150,5,0	1/1:15,0:15:12.71:304,13,0	0/0:35,0:35:90.15:0,90,1344	1/1:27,0:27:44.55:981,45,0	1/1:30,0:30:61.88:1233,62,0	1/1:24,0:24:43.03:631,43,0	1/1:21,0:21:36.49:794,36,0	1/1:31,0:31:32.87:665,33,0	1/1:24,0:24:23.81:523,24,0	0/0:35,0:35:69.22:0,69,1147	1/1:24,0:24:29.91:714,30,0	0/1:16,0:16:22.15:22,0,244	0/0:7,0:7:9.03:0,9,134	1/1:17,0:14:12.83:217,13,0	1/1:34,0:34:78.24:1331,78,0	0/1:29,0:28:8.87:503,0,9	1/1:20,0:20:0.79:526,1,0	0/1:20,0:20:2.45:436,0,2	1/1:18,0:18:24.04:572,24,0	1/1:24,0:24:41.96:945,42,0	1/1:21,0:21:38.81:640,39,0	1/1:33,0:33:36.52:864,37,0	1/1:9,0:9:14.45:128,14,0
chr10	25361580	.	T	TGGAAATC	6136.48	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-5.491;DP=620;FS=0.000;HRun=0;HaplotypeScore=161.0693;InbreedingCoeff=0.9953;MQ=85.40;MQ0=0;MQRankSum=-12.266;QD=90.24;ReadPosRankSum=-1.952;VQSLOD=5.1095;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,8:18:36.12:1204,36,0	0/0:14,0:14:42.14:0,42,1131	0/0:20,0:20:51.65:0,52,1329	0/0:21,0:21:60.19:0,60,1463	0/0:21,0:21:60.21:0,60,1614	0/0:30,0:30:90.31:0,90,2406	0/0:22,0:22:60.21:0,60,1609	0/0:21,0:21:60.20:0,60,1562	0/0:22,0:22:66.23:0,66,1739	0/0:23,0:23:63.21:0,63,1643	0/0:25,0:25:69.24:0,69,1812	0/0:21,0:21:63.22:0,63,1633	0/0:27,0:27:81.28:0,81,2180	0/0:19,0:19:57.20:0,57,1506	1/1:7,22:30:87.30:3138,87,0	0/0:28,0:28:81.25:0,81,2031	1/1:3,9:13:30.10:1090,30,0	1/1:4,3:7:18.06:705,18,0	0/0:25,0:25:69.24:0,69,1845	0/0:23,0:23:69.22:0,69,1795	0/0:23,0:23:69.24:0,69,1849	0/0:26,0:26:78.27:0,78,2022	0/0:25,0:25:72.25:0,72,1941	0/0:17,0:17:48.16:0,48,1273	0/0:30,0:30:90.30:0,90,2344	0/0:29,0:29:87.30:0,87,2346	0/0:34,0:34:96.33:0,96,2572	0/0:6,0:6:18.06:0,18,469
chr10	25362071	.	T	TA	1014.21	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=7.275;DP=499;FS=9.497;HRun=0;HaplotypeScore=90.3447;InbreedingCoeff=0.8249;MQ=71.59;MQ0=0;MQRankSum=-1.485;QD=18.44;ReadPosRankSum=1.362;VQSLOD=5.5519;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,5:11:29.80:322,30,0	0/0:11,0:11:30.10:0,30,419	0/0:13,0:11:17.84:0,18,207	0/0:12,0:9:11.25:0,11,139	0/0:42,0:42:99:0,119,1636	0/0:13,0:13:33.09:0,33,420	0/0:8,0:8:21.06:0,21,277	0/0:36,0:36:99:0,99,1338	0/0:12,0:12:33.11:0,33,461	0/0:17,0:17:48.15:0,48,646	0/0:36,0:36:99:0,108,1495	0/0:10,0:10:30.04:0,30,364	0/0:17,0:17:48.16:0,48,668	0/0:15,0:15:45.09:0,45,590	0/1:12,0:12:14.19:14,0,131	0/0:12,0:12:36.11:0,36,487	1/1:15,6:21:52.70:539,53,0	1/1:11,0:11:29.21:286,29,0	0/0:19,0:19:51.01:0,51,662	0/0:23,0:23:69.22:0,69,942	0/0:10,0:10:24.08:0,24,335	0/0:19,0:19:51.16:0,51,696	0/0:22,0:22:63.19:0,63,848	0/0:10,0:10:30.10:0,30,418	0/0:25,0:25:66.20:0,66,902	0/0:24,0:24:66.21:0,66,891	0/0:31,0:31:84.26:0,84,1139	0/0:7,0:7:18.06:0,18,252
chr10	25362081	.	G	GA	8492.34	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=-10.785;DP=499;FS=10.470;HRun=9;HaplotypeScore=69.8520;InbreedingCoeff=0.9912;MQ=71.07;MQ0=0;MQRankSum=1.632;QD=22.12;ReadPosRankSum=1.297;VQSLOD=5.3453;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:11:18.69:0,19,79	1/1:2,8:10:24.06:265,24,0	0/0:13,0:11:20.06:0,20,178	0/0:12,0:8:20.57:0,21,151	1/1:6,33:40:95.88:1010,96,0	1/1:1,2:19:31.25:156,31,0	1/1:0,0:10:22.73:114,23,0	0/0:32,0:32:71.97:0,72,625	1/1:0,12:12:30.08:332,30,0	1/1:2,14:17:44.95:476,45,0	1/1:4,31:35:53.45:893,53,0	1/1:1,0:10:25.52:127,26,0	1/1:2,1:18:39.97:218,40,0	1/1:1,15:16:48.06:515,48,0	0/0:2,0:13:18.66:0,19,56	1/1:0,10:10:30.08:332,30,0	0/0:16,0:22:40.54:0,41,151	0/0:11,0:12:25.17:0,25,105	1/1:2,14:16:42.11:464,42,0	1/1:1,22:23:66.14:717,66,0	1/1:2,11:13:21.06:232,21,0	1/1:0,2:19:42.73:218,43,0	1/1:1,1:20:42.78:232,43,0	1/1:0,0:8:22.73:114,23,0	1/1:3,21:24:51.14:564,51,0	1/1:6,21:27:63.17:697,63,0	1/1:5,22:28:36.95:619,37,0	1/1:3,6:9:18.05:199,18,0
chr10	25362223	.	G	GAA	8076.94	PASS	AB=0.769;AC=42;AF=0.750;AN=56;BaseQRankSum=-4.280;DP=543;FS=0.989;HRun=13;HaplotypeScore=78.0620;InbreedingCoeff=0.6738;MQ=77.10;MQ0=1;MQRankSum=1.300;QD=18.53;ReadPosRankSum=1.132;VQSLOD=4.3143;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:37:41.46:0,41,487	1/1:2,8:11:17.99:207,18,0	0/0:17,0:15:2.87:0,3,92	0/1:16,0:13:1.36:1,0,58	1/1:7,18:29:32.15:599,32,0	1/1:2,8:13:20.04:221,20,0	1/1:1,9:11:21.07:281,21,0	0/1:25,0:27:1.27:1,0,317	1/1:1,8:10:21.02:264,21,0	1/1:7,12:23:23.65:506,24,0	1/1:9,12:23:50.64:638,51,0	0/1:3,1:9:14.87:66,0,15	1/1:11,16:28:38.61:476,39,0	1/1:4,12:17:17.49:187,17,0	0/0:21,0:24:28.71:0,29,260	1/1:3,13:17:29.53:354,30,0	0/0:17,0:19:23.45:0,23,343	0/0:9,0:9:14.97:0,15,154	1/1:5,13:21:38.10:547,38,0	1/1:8,13:27:52.58:574,53,0	1/1:2,12:16:18.02:213,18,0	1/1:4,17:22:50.49:595,50,0	1/1:6,10:20:23.04:250,23,0	1/1:0,10:10:21.07:285,21,0	0/1:4,15:24:3.82:413,0,4	1/1:20,6:27:57.12:687,57,0	1/1:6,24:32:52.63:629,53,0	1/1:2,0:2:6.02:80,6,0
chr10	25364263	.	G	GGGTT	1247.73	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-6.388;DP=466;FS=4.962;HRun=0;HaplotypeScore=79.8302;InbreedingCoeff=0.9144;MQ=98.29;MQ0=0;MQRankSum=-3.187;QD=65.67;ReadPosRankSum=2.168;VQSLOD=5.9383;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:75.23:0,75,1311	0/0:7,0:7:21.07:0,21,388	0/0:25,0:25:62.17:0,62,1101	0/0:28,0:28:68.93:0,69,1136	0/0:7,0:7:18.06:0,18,319	0/0:19,0:19:54.19:0,54,999	0/0:26,0:26:78.25:0,78,1411	0/0:24,0:24:60.20:0,60,1052	0/0:21,0:21:60.17:0,60,1027	0/0:14,0:14:42.14:0,42,777	0/0:8,0:8:21.07:0,21,371	0/0:19,0:19:51.17:0,51,933	0/0:16,0:16:48.15:0,48,855	0/0:19,0:19:57.20:0,57,1042	1/1:0,19:19:51.18:1343,51,0	0/0:19,0:19:57.19:0,57,1030	0/0:25,0:25:69.23:0,69,1239	0/0:13,0:13:36.12:0,36,655	0/0:15,0:15:42.14:0,42,757	0/0:5,0:5:15.04:0,15,249	0/0:17,0:17:48.15:0,48,846	0/0:9,0:9:27.08:0,27,454	0/0:8,0:8:24.08:0,24,444	0/0:14,0:14:36.12:0,36,650	0/0:16,0:16:39.02:0,39,721	0/0:13,0:13:36.12:0,36,666	0/0:30,0:30:84.29:0,84,1554	0/0:3,0:3:9.03:0,9,167
chr10	25365887	.	AT	A	929.27	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=9.050;DP=537;FS=3.636;HRun=6;HaplotypeScore=60.6631;InbreedingCoeff=0.9757;MQ=77.97;MQ0=0;MQRankSum=-1.860;QD=14.52;ReadPosRankSum=0.386;VQSLOD=3.1090;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,13:15:24.06:257,24,0	0/0:6,0:6:18.05:0,18,220	0/0:25,0:17:31.73:0,32,251	0/0:26,0:23:41.16:0,41,419	0/0:23,0:23:66.19:0,66,839	0/0:25,0:25:72.19:0,72,900	0/0:11,0:11:30.07:0,30,365	0/0:39,0:39:99:0,105,1295	0/0:22,0:22:60.64:0,61,770	0/0:14,0:14:39.07:0,39,481	0/0:18,0:18:51.12:0,51,627	0/0:24,1:25:36.98:0,37,734	0/0:14,0:14:39.13:0,39,511	0/0:17,0:17:48.13:0,48,590	1/1:30,0:30:65.16:445,65,0	0/0:10,0:9:30.06:0,30,352	1/1:3,7:10:18.04:192,18,0	1/1:0,9:9:18.05:193,18,0	0/0:24,0:24:65.67:0,66,782	0/0:39,0:40:99:0,111,1342	0/0:4,0:4:9.03:0,9,118	0/0:16,0:16:48.08:0,48,558	0/0:20,0:20:57.15:0,57,704	0/0:16,0:16:42.03:0,42,497	0/0:21,0:21:63.20:0,63,827	0/0:21,0:21:60.18:0,60,765	0/0:25,0:25:69.15:0,69,821	0/0:11,0:11:24.08:0,24,314
chr10	25365892	.	TTA	T	897.64	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.386;DP=534;FS=3.733;HRun=0;HaplotypeScore=70.6509;InbreedingCoeff=0.7326;MQ=79.54;MQ0=0;MQRankSum=0.251;QD=30.95;ReadPosRankSum=1.025;VQSLOD=5.4047;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:3.77:0,4,8	0/0:6,0:6:18.05:0,18,304	0/0:25,0:17:33:0,33,403	0/0:27,0:24:38.87:0,39,741	0/0:22,0:22:66.20:0,66,1251	0/0:26,0:26:78.17:0,78,1361	0/0:12,0:12:36.06:0,36,574	0/0:38,0:38:99:0,114,1972	0/0:21,0:21:62.98:0,63,1156	0/0:13,0:13:39.08:0,39,732	0/0:18,0:18:54.17:0,54,972	0/0:25,0:25:61.27:0,61,1170	0/0:14,0:14:42.12:0,42,797	0/0:18,0:18:54.13:0,54,903	1/1:1,28:29:66.07:992,66,0	0/0:11,0:10:33.06:0,33,517	0/0:8,0:8:5.81:0,6,28	0/0:10,0:10:2.83:0,3,6	0/0:23,0:23:67.08:0,67,1153	0/0:41,0:41:99:0,123,2086	0/0:4,0:4:12.02:0,12,203	0/0:16,0:16:48.13:0,48,840	0/0:20,0:20:60.16:0,60,1056	0/0:14,0:14:42.08:0,42,742	0/0:21,0:21:63.22:0,63,1250	0/0:21,0:21:63.20:0,63,1182	0/0:27,0:27:81.15:0,81,1283	0/0:11,0:11:24.08:0,24,472
chr10	25366714	.	TA	T	7746.27	PASS	AB=0.556;AC=49;AF=0.875;AN=56;BaseQRankSum=4.239;DP=373;FS=0.000;HRun=9;HaplotypeScore=39.1740;InbreedingCoeff=0.7492;MQ=74.51;MQ0=0;MQRankSum=-1.369;QD=22.92;ReadPosRankSum=4.510;VQSLOD=4.9379;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,28:30:74.94:669,75,0	1/1:0,6:6:15.01:137,15,0	0/0:5,0:5:12.03:0,12,134	0/0:11,0:11:8.76:0,9,82	1/1:3,15:18:45.02:412,45,0	1/1:1,10:11:24.01:220,24,0	1/1:0,4:4:9:82,9,0	0/0:18,1:19:43.28:0,43,572	1/1:2,8:10:21.01:192,21,0	1/1:0,23:23:69.02:624,69,0	1/1:1,12:13:36.02:329,36,0	1/1:1,18:19:54.02:494,54,0	1/1:1,9:10:24.01:220,24,0	1/1:2,10:12:24.01:220,24,0	1/1:1,15:16:36.01:329,36,0	1/1:2,12:14:27.01:247,27,0	1/1:0,20:20:51.03:467,51,0	1/1:0,13:13:39.02:357,39,0	1/1:1,8:9:24.01:220,24,0	1/1:1,17:18:51.03:467,51,0	0/1:1,4:5:25.38:46,0,25	1/1:0,3:3:9:82,9,0	1/1:0,10:10:30.02:275,30,0	1/1:0,3:3:9:82,9,0	1/1:1,9:10:21.01:192,21,0	1/1:2,19:21:56.98:513,57,0	1/1:4,28:32:43.37:652,43,0	1/1:0,8:8:24.01:220,24,0
chr10	25366874	.	AAAAAG	A	9056.84	PASS	AB=1.000;AC=43;AF=0.768;AN=56;BaseQRankSum=7.483;DP=531;FS=1.461;HRun=0;HaplotypeScore=101.8190;InbreedingCoeff=0.7987;MQ=63.76;MQ0=7;MQRankSum=3.033;QD=25.95;ReadPosRankSum=3.471;VQSLOD=4.6211;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:75.04:0,75,1766	1/1:5,0:5:6:51,6,0	0/1:32,0:15:2.09:9,0,2	0/0:47,0:18:4.16:0,4,198	1/1:7,13:20:39.01:567,39,0	1/1:4,13:17:21.07:397,21,0	1/1:5,6:11:9.03:132,9,0	0/0:28,0:28:60.16:0,60,1187	1/1:1,11:12:30.10:567,30,0	1/1:4,14:18:42.14:752,42,0	1/1:4,8:12:21.07:278,21,0	1/1:2,19:21:39.07:737,39,0	1/1:3,14:17:30.10:554,30,0	1/1:2,11:13:24.08:433,24,0	0/0:16,0:16:45.15:0,45,949	1/1:3,15:18:33.11:623,33,0	0/0:36,0:34:75.21:0,75,1614	0/0:22,0:22:44.11:0,44,1015	1/1:8,10:18:30.02:417,30,0	1/1:3,10:13:26.99:402,27,0	1/1:2,4:6:1.55:160,2,0	1/1:2,5:7:9.03:129,9,0	1/1:2,13:15:20.60:372,21,0	1/1:2,16:18:21.07:397,21,0	1/1:3,11:14:18.06:340,18,0	1/1:5,16:21:48.16:849,48,0	1/1:6,25:31:34.95:834,35,0	1/1:2,8:9:3.01:57,3,0
chr10	25367430	.	C	CT	14621.33	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-8.539;DP=558;FS=1.285;HRun=8;HaplotypeScore=51.7769;InbreedingCoeff=0.9972;MQ=78.86;MQ0=0;MQRankSum=-4.702;QD=28.73;ReadPosRankSum=4.369;VQSLOD=4.8771;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,18:20:51.11:573,51,0	1/1:0,12:13:32.93:361,33,0	0/0:15,0:14:20.56:0,21,261	0/0:10,0:10:30:0,30,269	1/1:5,34:39:73.07:1083,73,0	1/1:6,27:33:53.77:873,54,0	1/1:1,17:18:42.12:485,42,0	0/0:24,0:24:56.31:0,56,520	1/1:2,17:19:49.39:557,49,0	1/1:4,15:19:45.13:519,45,0	1/1:0,15:15:39.07:435,39,0	1/1:1,19:20:58.06:660,58,0	1/1:2,15:17:45.13:511,45,0	1/1:0,17:17:48.14:554,48,0	1/1:0,18:18:51.15:589,51,0	1/1:1,16:17:39.12:450,39,0	1/1:3,14:17:37.97:448,38,0	1/1:1,9:10:24.07:277,24,0	1/1:4,16:20:48.13:544,48,0	1/1:2,18:20:54.16:623,54,0	1/1:3,13:16:39.12:450,39,0	1/1:0,17:17:39.12:450,39,0	1/1:2,25:27:63.19:727,63,0	1/1:4,14:18:47.16:516,47,0	1/1:3,23:26:51.15:589,51,0	1/1:1,28:29:84.24:962,84,0	1/1:2,30:31:84.05:969,84,0	1/1:0,12:12:36.11:415,36,0
chr10	25367864	.	T	TC	4545.04	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-13.724;DP=759;FS=2.935;HRun=0;HaplotypeScore=68.4288;InbreedingCoeff=0.9984;MQ=80.43;MQ0=0;MQRankSum=-4.117;QD=45.00;ReadPosRankSum=2.453;VQSLOD=5.1637;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,41:42:99:1822,114,0	0/0:10,0:10:30.10:0,30,419	0/0:22,0:21:60.20:0,60,824	0/0:23,0:23:59.36:0,59,753	0/0:39,0:39:99:0,117,1634	0/0:26,0:26:78.25:0,78,1076	0/0:29,0:29:84.27:0,84,1159	0/0:27,0:27:78.25:0,78,1077	0/0:24,0:24:69.22:0,69,948	0/0:35,0:35:99:0,102,1399	0/0:33,0:33:96.31:0,96,1323	0/0:28,0:28:81.24:0,81,1080	0/0:28,0:28:84.27:0,84,1159	0/0:24,0:24:72.23:0,72,992	0/0:30,0:30:90.29:0,90,1241	0/0:21,0:21:63.21:0,63,881	1/1:0,33:33:96.33:1535,96,0	1/1:2,24:26:75.26:1188,75,0	0/0:17,0:17:51.17:0,51,713	0/0:39,0:39:99:0,105,1468	0/0:29,0:29:87.29:0,87,1213	0/0:25,0:25:72.24:0,72,1007	0/0:21,0:21:63.21:0,63,880	0/0:29,0:29:87.29:0,87,1216	0/0:28,0:28:84.27:0,84,1159	0/0:30,0:30:90.29:0,90,1243	0/0:32,0:32:90.30:0,90,1259	0/0:9,0:9:21.07:0,21,294
chr10	25368235	.	CT	C	1234.21	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=10.591;DP=623;FS=0.568;HRun=7;HaplotypeScore=59.1175;InbreedingCoeff=0.9677;MQ=70.16;MQ0=0;MQRankSum=-2.185;QD=23.29;ReadPosRankSum=1.739;VQSLOD=3.5861;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,23:25:63.14:643,63,0	0/0:8,0:8:24.08:0,24,300	0/0:14,0:14:30.09:0,30,366	0/0:5,0:5:8.99:0,9,98	0/0:27,0:27:72.22:0,72,893	0/0:32,0:32:90.28:0,90,1120	0/0:26,0:26:78.23:0,78,946	0/0:41,0:41:99:0,114,1428	0/0:26,0:26:69.21:0,69,855	0/0:25,0:25:72.22:0,72,891	0/0:25,0:25:66.18:0,66,804	0/0:22,0:22:63.20:0,63,791	0/0:23,0:23:69.21:0,69,854	0/0:16,0:16:39.12:0,39,491	0/0:31,0:31:84.26:0,84,1045	0/0:26,0:26:78.25:0,78,980	1/1:0,16:16:42.10:428,42,0	1/1:1,11:12:30.07:306,30,0	0/0:14,0:14:36.12:0,36,453	0/0:35,0:35:99:0,99,1221	0/0:22,0:22:51.16:0,51,642	0/0:30,0:30:87.27:0,87,1083	0/0:17,0:17:45.14:0,45,555	0/0:18,0:18:45.14:0,45,566	0/0:25,0:25:69.22:0,69,865	0/0:34,0:34:93.29:0,93,1157	0/0:24,0:24:69.22:0,69,865	0/0:4,0:4:12.04:0,12,151
chr10	25368603	.	TGG	T	4739.74	PASS	AB=0.961;AC=35;AF=0.625;AN=56;BaseQRankSum=-6.469;DP=492;FS=36.261;HRun=5;HaplotypeScore=89.0458;InbreedingCoeff=-0.2263;MQ=64.21;MQ0=24;MQRankSum=-1.593;QD=11.21;ReadPosRankSum=5.669;VQSLOD=0.0618;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,0:5:5.98:48,6,0	0/1:6,5:11:37.65:38,0,72	0/0:20,0:9:20.16:0,20,227	0/0:25,0:11:18.75:0,19,154	1/1:3,17:20:6:59,6,0	0/1:24,0:24:99:244,0,117	0/1:20,0:19:48.71:250,0,49	0/0:24,0:23:39.20:0,39,549	0/1:15,0:15:71.27:153,0,71	0/1:23,0:22:14.20:347,0,14	0/1:10,1:11:26.73:144,0,27	0/1:23,0:21:58.36:280,0,58	0/1:11,0:11:29.08:113,0,29	0/1:16,0:15:99:123,0,136	1/1:16,0:16:20.97:171,21,0	0/1:19,0:19:63.40:190,0,63	1/1:17,0:16:3.99:131,4,0	1/1:15,0:15:25.05:212,25,0	1/1:9,0:8:24.01:213,24,0	0/1:22,1:23:40.92:276,0,41	1/1:17,1:17:6.43:317,6,0	1/1:2,11:13:6.02:84,6,0	0/1:23,1:23:15.85:235,0,16	0/1:27,2:26:69.98:332,0,70	0/1:20,1:20:72.92:264,0,73	1/1:17,0:15:1.98:218,2,0	0/1:16,0:16:57.47:206,0,57	1/1:7,0:4:11.96:94,12,0
chr10	25368605	.	GGGGTGTGTGTGT	G	2695.47	PASS	AB=0.998;AC=23;AF=0.411;AN=56;BaseQRankSum=-9.747;DP=508;FS=10.648;HRun=0;HaplotypeScore=182.5840;InbreedingCoeff=-0.4618;MQ=63.69;MQ0=27;MQRankSum=1.102;QD=7.00;ReadPosRankSum=-0.489;VQSLOD=1.6114;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,0:5:5.98:48,6,0	0/0:11,0:11:21.07:0,21,938	0/0:20,0:9:20.19:0,20,259	0/0:25,0:11:20.95:0,21,162	0/0:19,0:19:6.02:0,6,179	0/1:26,0:26:80.24:80,0,2277	0/1:20,0:19:99:157,0,970	0/0:25,0:24:42.25:0,42,950	0/1:16,0:16:72.55:73,0,1087	0/1:24,0:23:99:202,0,1360	0/1:12,0:12:90.95:91,0,773	0/1:23,0:21:82.35:82,0,1547	0/0:10,0:10:1.64:0,2,803	0/1:16,0:15:24.75:25,0,1192	1/1:0,16:16:24.03:814,24,0	0/1:19,0:19:99:161,0,973	0/1:17,0:15:99:100,0,533	0/1:16,0:15:81.50:82,0,543	0/1:10,0:9:99:159,0,233	0/1:26,0:26:99:140,0,2049	0/1:20,0:19:69.40:69,0,1344	0/0:12,0:13:9.03:0,9,285	0/1:25,0:24:94.63:95,0,1047	0/1:30,0:27:99:153,0,1625	0/1:22,0:21:53.66:54,0,1879	0/1:16,0:14:88.35:88,0,892	0/1:16,0:16:99:111,0,931	0/1:9,0:6:75.69:76,0,210
chr10	25369005	.	AATAGATAG	A	11234.47	PASS	AB=1.000;AC=41;AF=0.820;AN=50;BaseQRankSum=6.210;DP=525;FS=3.631;HRun=0;HaplotypeScore=137.1936;InbreedingCoeff=0.7401;MQ=70.15;MQ0=3;MQRankSum=-5.160;QD=27.27;ReadPosRankSum=-0.378;VQSLOD=4.4831;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:21:14.98:0,15,178	1/1:6,6:12:15.05:372,15,0	./.	./.	1/1:14,14:28:42.06:928,42,0	1/1:5,0:15:21.07:391,21,0	1/1:10,0:12:6.02:87,6,0	0/1:27,0:25:13.83:14,0,95	1/1:7,5:12:15.05:372,15,0	1/1:16,19:35:57.07:1126,57,0	1/1:6,13:19:35.99:726,36,0	1/1:8,10:18:21.07:521,21,0	1/1:12,16:28:39.13:966,39,0	1/1:8,9:17:15.05:372,15,0	0/0:18,0:18:30.10:0,30,1117	1/1:11,10:21:27.09:670,27,0	0/0:11,0:11:30.10:0,30,1132	0/0:11,0:11:12.04:0,12,377	1/1:16,6:19:18:317,18,0	1/1:8,11:19:31.88:667,32,0	1/1:3,3:6:2.97:20,3,0	1/1:9,7:16:18.01:391,18,0	1/1:10,8:18:18.06:447,18,0	./.	1/1:13,15:28:33.11:812,33,0	1/1:5,10:15:27.08:621,27,0	1/1:12,28:40:54.19:1340,54,0	1/1:2,1:3:3.01:74,3,0
chr10	25369281	.	TA	T	7356.40	PASS	AB=0.966;AC=45;AF=0.804;AN=56;BaseQRankSum=6.341;DP=504;FS=5.710;HRun=10;HaplotypeScore=59.0439;InbreedingCoeff=0.8788;MQ=76.00;MQ0=2;MQRankSum=-1.853;QD=18.25;ReadPosRankSum=4.008;VQSLOD=5.5496;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:56.95:0,57,587	1/1:2,6:8:14.99:130,15,0	0/0:26,0:17:38.15:0,38,335	0/1:27,1:21:9.71:10,0,91	1/1:4,22:26:59.77:502,60,0	1/1:0,21:21:41.99:365,42,0	1/1:1,8:9:20.99:182,21,0	0/0:21,2:23:14.16:0,14,604	1/1:1,8:9:18:156,18,0	1/1:3,28:31:50.80:670,51,0	1/1:3,9:12:26.99:234,27,0	1/1:6,14:20:41.98:365,42,0	1/1:1,14:15:29.99:260,30,0	1/1:1,9:11:26.03:214,26,0	1/1:3,16:19:47.98:417,48,0	1/1:1,12:13:29.99:260,30,0	0/0:24,0:24:69.13:0,69,731	0/0:7,0:7:12.02:0,12,125	1/1:0,14:14:41.99:364,42,0	1/1:3,15:18:44.99:390,45,0	1/1:2,12:14:23.99:208,24,0	1/1:2,13:15:32.94:279,33,0	1/1:3,10:13:20.86:182,21,0	1/1:2,13:15:23.99:208,24,0	1/1:5,22:27:53.97:469,54,0	1/1:2,21:23:62.97:546,63,0	1/1:2,24:26:68.98:599,69,0	1/1:0,15:16:41.03:345,41,0
chr10	25369866	.	A	AT	842.27	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-1.693;DP=593;FS=6.417;HRun=5;HaplotypeScore=92.5726;InbreedingCoeff=0.9905;MQ=76.54;MQ0=0;MQRankSum=-3.881;QD=26.32;ReadPosRankSum=2.000;VQSLOD=3.2425;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,13:17:33.11:430,33,0	0/0:7,0:7:18.04:0,18,193	0/0:14,0:14:33.04:0,33,341	0/0:19,0:19:51.36:0,51,537	0/0:37,0:37:96.22:0,96,1024	0/0:30,0:30:75.19:0,75,806	0/0:13,0:13:33.08:0,33,355	0/0:25,0:25:63.14:0,63,671	0/0:28,0:28:78.20:0,78,838	0/0:20,0:20:60.15:0,60,645	0/0:24,0:24:72.15:0,72,752	0/0:32,0:32:87.17:0,87,911	0/0:23,0:23:66.16:0,66,709	0/0:23,0:23:66.16:0,66,702	0/0:24,0:24:63.15:0,63,677	0/0:15,0:15:45.11:0,45,484	1/1:0,10:10:27.09:355,27,0	1/1:0,5:5:15.05:197,15,0	0/0:11,0:11:30.07:0,30,322	0/0:35,0:35:99:0,99,1063	0/0:18,0:18:51.13:0,51,548	0/0:17,0:17:45.11:0,45,484	0/0:25,0:25:72.18:0,72,773	0/0:13,0:13:33.08:0,33,355	0/0:19,0:19:54.14:0,54,580	0/0:31,0:31:84.19:0,84,890	0/0:42,0:42:99:0,114,1224	0/0:16,0:16:35.45:0,35,386
chr10	25371232	.	A	AGG	8569.46	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=15.408;DP=421;FS=17.061;HRun=0;HaplotypeScore=198.2990;InbreedingCoeff=0.9367;MQ=82.11;MQ0=0;MQRankSum=-14.994;QD=41.00;ReadPosRankSum=8.767;VQSLOD=2.9339;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,159,2523	1/1:0,6:6:18.06:268,18,0	0/0:29,0:28:81.17:0,81,1157	0/0:22,0:21:57.90:0,58,890	1/1:5,8:13:33.09:481,33,0	1/1:0,13:13:39.13:579,39,0	1/1:1,4:5:12.04:172,12,0	0/0:44,0:44:99:0,111,1756	1/1:1,14:15:45.13:641,45,0	1/1:3,6:9:23.91:344,24,0	1/1:1,7:8:24.07:325,24,0	1/1:1,10:11:33.11:482,33,0	1/1:3,10:13:36.12:540,36,0	1/1:1,13:14:36.12:515,36,0	0/0:24,0:24:72.25:0,72,1172	1/1:2,12:14:39.13:575,39,0	0/0:21,0:21:63.22:0,63,1028	0/0:19,0:19:54.08:0,54,797	1/1:0,5:5:15.05:227,15,0	1/1:2,15:17:51.17:752,51,0	1/1:1,1:2:3.01:43,3,0	1/1:0,11:11:33.11:477,33,0	1/1:3,6:9:27.06:357,27,0	1/1:3,5:8:15.05:208,15,0	1/1:0,9:9:27.09:398,27,0	1/1:2,6:8:24.08:382,24,0	1/1:1,15:16:48.16:717,48,0	1/1:1,2:3:6.02:88,6,0
chr10	25371233	.	A	AGTG	6833.57	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=16.913;DP=407;FS=16.082;HRun=0;HaplotypeScore=206.1161;InbreedingCoeff=0.9345;MQ=83.01;MQ0=0;MQRankSum=-15.817;QD=35.04;ReadPosRankSum=10.022;VQSLOD=3.0170;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,157,2854	1/1:0,6:6:18.06:237,18,0	0/0:28,0:27:78.26:0,78,1372	0/0:22,0:21:63.11:0,63,1090	1/1:2,8:10:29.82:333,30,0	1/1:0,13:13:39.12:496,39,0	1/1:0,4:4:12.04:145,12,0	0/0:46,0:46:99:0,123,2136	1/1:0,14:14:42.13:526,42,0	1/1:2,6:8:19.09:222,19,0	1/1:0,7:7:21.06:252,21,0	1/1:1,10:11:33.09:387,33,0	1/1:2,10:12:35.99:403,36,0	1/1:1,11:14:36.11:434,36,0	0/0:24,0:24:72.25:0,72,1332	1/1:1,12:13:39.11:473,39,0	0/0:21,0:21:63.22:0,63,1175	0/0:18,0:18:51.13:0,51,895	1/1:0,5:5:15.05:202,15,0	1/1:2,15:17:51.14:609,51,0	1/1:1,1:2:3.01:37,3,0	1/1:0,11:11:33.10:400,33,0	1/1:1,6:7:18.52:215,19,0	1/1:1,5:6:15.03:165,15,0	1/1:0,9:9:27.09:339,27,0	1/1:2,6:8:24.06:293,24,0	1/1:1,15:16:48.13:587,48,0	1/1:0,2:2:6.02:78,6,0
chr10	25371236	.	A	ATGTGTG	16504.59	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=16.440;DP=395;FS=9.155;HRun=0;HaplotypeScore=187.6628;InbreedingCoeff=0.9343;MQ=82.68;MQ0=0;MQRankSum=-15.895;QD=88.26;ReadPosRankSum=10.460;VQSLOD=4.0178;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,154,3847	1/1:0,6:6:18.06:566,18,0	0/0:26,0:26:75.25:0,75,1780	0/0:21,0:20:60.17:0,60,1370	1/1:1,8:9:26.45:739,26,0	1/1:0,13:13:39.13:1214,39,0	1/1:0,4:4:12.04:368,12,0	0/0:45,0:45:99:0,132,3300	1/1:1,14:15:45.15:1348,45,0	1/1:1,6:7:18.06:575,18,0	1/1:0,7:7:21.07:645,21,0	1/1:0,10:10:30.10:922,30,0	1/1:0,10:10:30.10:916,30,0	1/1:2,12:15:39.13:1143,39,0	0/0:24,0:24:69.24:0,69,1769	1/1:0,12:12:36.12:1110,36,0	0/0:22,0:22:63.22:0,63,1608	0/0:17,0:17:51.18:0,51,1303	1/1:0,5:5:15.05:475,15,0	1/1:1,15:16:46.97:1392,47,0	1/1:0,1:1:3.01:92,3,0	1/1:0,11:11:33.11:1009,33,0	1/1:0,6:6:18.06:550,18,0	1/1:1,5:6:15.05:446,15,0	1/1:0,9:9:27.09:837,27,0	1/1:0,6:6:18.06:567,18,0	1/1:1,15:16:48.13:1403,48,0	1/1:1,2:3:6.49:189,6,0
chr10	25371355	.	AC	A	956.76	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.919;DP=800;FS=0.000;HRun=2;HaplotypeScore=82.7222;InbreedingCoeff=0.9901;MQ=72.22;MQ0=0;MQRankSum=0.339;QD=32.99;ReadPosRankSum=2.449;VQSLOD=3.7332;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,123,1817	0/0:8,0:8:24.08:0,24,360	0/0:35,0:35:99:0,102,1396	0/0:31,0:31:75.25:0,75,1220	0/0:29,0:29:81.27:0,81,1214	0/0:31,0:31:90.29:0,90,1327	0/0:31,0:31:90.29:0,90,1316	0/0:38,0:38:99:0,108,1489	0/0:33,0:33:96.25:0,96,1378	0/0:34,0:34:93.30:0,93,1373	0/0:31,0:31:93.31:0,93,1391	0/0:26,0:26:69.13:0,69,963	0/0:37,0:37:99:0,108,1607	0/0:25,0:25:75.25:0,75,1104	1/1:0,29:29:81.26:1052,81,0	0/0:35,0:35:99:0,105,1527	0/0:25,0:25:72.24:0,72,1078	0/0:21,0:21:63.17:0,63,907	0/0:20,0:20:60.16:0,60,868	0/0:30,0:30:87.29:0,87,1301	0/0:32,0:32:81.27:0,81,1209	0/0:23,0:23:69.23:0,69,1033	0/0:17,0:17:51.16:0,51,742	0/0:36,0:36:99:0,108,1517	0/0:24,0:24:72.24:0,72,1079	0/0:30,0:30:90.30:0,90,1331	0/0:40,0:40:99:0,120,1740	0/0:6,0:6:18.06:0,18,270
chr10	25371427	.	GA	G	2310.96	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=7.138;DP=712;FS=28.717;HRun=2;HaplotypeScore=66.9717;InbreedingCoeff=0.9969;MQ=75.82;MQ0=0;MQRankSum=-1.514;QD=33.98;ReadPosRankSum=1.210;VQSLOD=1.6661;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,40:40:99:1402,108,0	0/0:19,0:19:57.18:0,57,828	0/0:27,0:27:81.27:0,81,1203	0/0:21,0:20:57.17:0,57,818	0/0:20,0:20:60.14:0,60,836	0/0:33,0:33:90.20:0,90,1243	0/0:34,0:34:99:0,102,1507	0/0:34,0:34:99:0,102,1511	0/0:22,0:22:66.21:0,66,966	0/0:35,0:35:99:0,102,1529	0/0:26,0:26:78.26:0,78,1169	0/0:22,0:22:63.21:0,63,944	0/0:32,0:32:93.30:0,93,1372	0/0:17,0:17:45.14:0,45,656	0/0:24,0:24:66.22:0,66,989	0/0:33,0:33:99:0,99,1459	1/1:0,18:18:51.17:662,51,0	1/1:0,10:10:30.10:389,30,0	0/0:16,0:16:48.16:0,48,719	0/0:33,0:33:99:0,99,1459	0/0:28,0:28:84.28:0,84,1259	0/0:25,0:25:75.25:0,75,1124	0/0:19,0:19:57.19:0,57,854	0/0:31,0:31:93.30:0,93,1371	0/0:19,0:19:57.18:0,57,835	0/0:36,0:36:99:0,108,1618	0/0:32,0:32:96.25:0,96,1340	0/0:6,0:6:18.06:0,18,268
chr10	25372417	.	G	GAT	1321.62	PASS	AB=0.956;AC=20;AF=0.385;AN=52;BaseQRankSum=0.093;DP=344;FS=10.650;HRun=0;HaplotypeScore=82.1154;InbreedingCoeff=-0.4237;MQ=72.78;MQ0=2;MQRankSum=-1.657;QD=5.53;ReadPosRankSum=-0.437;VQSLOD=1.4240;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:14,0:14:38.94:39,0,76	0/0:5,0:5:9.01:0,9,101	0/0:7,0:6:13.54:0,14,135	0/0:21,0:15:20.86:0,21,233	0/1:9,14:23:93.04:93,0,133	0/0:17,0:17:18.06:0,18,257	0/0:6,0:6:9.02:0,9,114	0/0:35,0:35:99:0,99,1401	0/1:5,0:5:36.95:43,0,37	0/1:23,0:23:99:150,0,611	0/1:15,0:15:58.83:59,0,85	1/1:4,0:4:3.01:49,3,0	0/1:8,0:8:26.78:27,0,77	0/1:11,0:11:23.32:95,0,23	0/0:7,0:7:2.96:0,3,42	0/1:7,0:7:39.72:40,0,77	0/1:10,0:10:30.37:30,0,156	0/1:10,0:10:47.99:48,0,74	0/1:19,0:17:99:125,0,322	0/1:12,0:12:30.71:31,0,161	./.	./.	1/1:6,0:6:3:25,3,0	0/0:2,0:2:3.01:0,3,31	0/1:10,9:19:32.84:33,0,221	0/1:21,0:21:99:292,0,370	0/1:20,0:20:99:188,0,221	0/1:12,0:11:99:108,0,171
chr10	25372419	.	T	TAT	1365.68	PASS	AB=0.979;AC=20;AF=0.385;AN=52;BaseQRankSum=0.154;DP=346;FS=12.054;HRun=0;HaplotypeScore=81.5444;InbreedingCoeff=-0.4237;MQ=71.74;MQ0=2;MQRankSum=-2.887;QD=5.69;ReadPosRankSum=-2.172;VQSLOD=1.2071;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:14,0:14:38.94:39,0,76	0/0:5,0:5:9.01:0,9,101	0/0:9,0:7:13.54:0,14,135	0/0:19,0:13:20.86:0,21,233	0/1:24,0:24:93.04:93,0,133	0/0:17,0:17:18.06:0,18,257	0/0:6,0:6:9.02:0,9,114	0/0:36,0:36:99:0,99,1401	0/1:5,0:5:36.95:43,0,37	0/1:23,0:23:99:197,0,608	0/1:14,0:14:58.83:59,0,85	1/1:4,0:4:3.01:49,3,0	0/1:8,0:8:26.78:27,0,77	0/1:15,0:15:23.32:95,0,23	0/0:7,0:7:2.96:0,3,42	0/1:7,0:7:39.72:40,0,77	0/1:9,0:9:30.37:30,0,156	0/1:5,4:10:47.99:48,0,74	0/1:19,0:18:99:122,0,358	0/1:10,0:10:30.71:31,0,161	./.	./.	1/1:5,0:5:3:25,3,0	0/0:4,0:4:3.01:0,3,31	0/1:20,0:20:32.84:33,0,221	0/1:21,0:21:99:292,0,370	0/1:20,0:20:99:188,0,221	0/1:12,0:11:99:108,0,171
chr10	25372442	.	TTTA	T	106.90	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.540;DP=310;FS=2.391;HRun=0;HaplotypeScore=71.5551;InbreedingCoeff=0.6287;MQ=75.63;MQ0=1;MQRankSum=-1.456;QD=15.27;ReadPosRankSum=-0.874;VQSLOD=3.2226;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:27.09:0,27,595	0/0:5,0:5:15.05:0,15,319	0/0:7,0:7:20.28:0,20,378	0/0:13,0:10:5.24:0,5,71	0/0:20,0:20:60.21:0,60,1322	0/0:15,0:15:45.15:0,45,982	0/0:4,0:4:12.04:0,12,252	0/0:28,0:28:72.24:0,72,1519	0/0:2,0:2:6.02:0,6,132	0/0:24,0:24:63.22:0,63,1388	0/0:13,0:13:39.13:0,39,860	0/0:3,0:3:9.03:0,9,198	0/0:7,0:7:21.07:0,21,463	0/0:15,0:15:42.14:0,42,886	1/1:3,4:7:12.03:193,12,0	0/0:4,0:4:12.04:0,12,265	0/0:11,0:11:33.11:0,33,703	0/0:8,0:8:18.06:0,18,350	0/0:21,0:21:48.16:0,48,1059	0/0:12,0:12:36.12:0,36,771	0/0:2,0:2:6.02:0,6,132	0/0:7,0:7:21:0,21,415	0/0:7,0:7:21.07:0,21,447	0/0:6,0:6:18.06:0,18,397	0/0:21,0:21:63.22:0,63,1378	0/0:14,0:14:39.13:0,39,840	0/0:16,0:16:45.15:0,45,990	0/0:8,0:8:21.07:0,21,459
chr10	25373861	.	TC	T	135.64	PASS	AC=4;AF=0.077;AN=52;BaseQRankSum=3.486;DP=588;FS=3.367;HRun=2;HaplotypeScore=87.2238;InbreedingCoeff=0.9482;MQ=48.03;MQ0=17;MQRankSum=-3.920;QD=10.43;ReadPosRankSum=-3.151;VQSLOD=0.6405;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,3:3:9.03:104,9,0	0/0:13,0:11:27.09:0,27,404	0/0:19,1:12:27.04:0,27,342	0/0:21,0:16:43.96:0,44,621	0/0:33,0:33:54.17:0,54,786	0/0:29,0:26:66.22:0,66,979	0/0:16,0:15:30.10:0,30,447	0/0:34,0:30:87.25:0,87,1228	0/0:22,0:21:54.01:0,54,775	0/0:21,0:21:60.20:0,60,898	0/0:26,0:25:48.12:0,48,692	0/0:24,0:22:54.05:0,54,806	0/0:32,0:29:56.98:0,57,819	0/0:25,0:24:59.78:0,60,831	1/1:1,7:6:12.04:139,12,0	0/0:23,0:23:53.97:0,54,775	./.	./.	0/0:24,0:19:57.18:0,57,826	0/0:32,0:27:69.19:0,69,986	0/0:31,0:30:78.24:0,78,1129	0/0:26,0:24:51.17:0,51,763	0/0:21,0:19:33.11:0,33,491	0/0:11,0:11:30.10:0,30,448	0/0:30,0:29:72.21:0,72,1052	0/0:25,0:23:62.95:0,63,903	0/0:25,0:25:56.78:0,57,851	0/0:10,1:10:21.07:0,21,314
chr10	25374995	.	AC	A	564.69	PASS	AB=0.542;AC=4;AF=0.077;AN=52;BaseQRankSum=3.058;DP=482;FS=51.806;HRun=1;HaplotypeScore=64.2442;InbreedingCoeff=0.4173;MQ=50.82;MQ0=18;MQRankSum=-6.102;QD=23.53;ReadPosRankSum=-0.824;VQSLOD=0.1837;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:1,8:9:17.92:193,0,18	0/0:9,0:9:24.08:0,24,383	./.	./.	0/0:16,0:16:33.11:0,33,526	0/0:21,0:21:48.15:0,48,732	0/0:16,0:14:33.09:0,33,499	0/0:27,0:21:63.20:0,63,982	0/0:20,0:20:45.14:0,45,695	0/0:27,0:25:75.26:0,75,1199	0/0:21,0:20:50.84:0,51,776	0/0:21,0:21:51.17:0,51,815	0/0:20,0:20:35.87:0,36,549	0/0:20,0:19:51.17:0,51,805	1/1:0,10:10:30.09:356,30,0	0/0:23,0:23:66.13:0,66,927	0/0:1,0:1:3.01:0,3,47	0/1:1,4:5:32.65:129,0,33	0/0:17,0:14:42.13:0,42,649	0/0:20,0:19:54.17:0,54,839	0/0:10,0:10:30.10:0,30,477	0/0:23,0:23:38.93:0,39,606	0/0:23,0:22:48.16:0,48,737	0/0:12,0:12:36.12:0,36,575	0/0:27,0:27:62.99:0,63,978	0/0:23,0:21:57.19:0,57,909	0/0:31,0:30:69.24:0,69,1100	0/0:9,0:9:27.09:0,27,431
chr10	25376213	.	GA	G	11369.07	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=14.337;DP=605;FS=16.513;HRun=7;HaplotypeScore=92.2241;InbreedingCoeff=0.9987;MQ=82.00;MQ0=0;MQRankSum=-2.356;QD=25.90;ReadPosRankSum=3.117;VQSLOD=3.6836;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,99,1229	1/1:0,7:7:21.05:214,21,0	0/0:20,0:20:31.42:0,31,507	0/0:24,0:22:38.35:0,38,405	1/1:0,17:17:51.11:518,51,0	1/1:4,23:27:57.13:582,57,0	1/1:1,17:18:45.10:459,45,0	0/0:28,0:28:72.21:0,72,883	1/1:1,18:19:48.11:490,48,0	1/1:0,34:34:99:1010,102,0	1/1:0,19:19:57.13:579,57,0	1/1:0,17:17:48.11:490,48,0	1/1:3,22:25:60.14:612,60,0	1/1:3,14:17:39.09:398,39,0	0/0:20,0:20:57.18:0,57,717	1/1:0,17:17:45.10:459,45,0	0/0:24,0:24:69.19:0,69,838	0/0:14,0:14:42.13:0,42,528	1/1:0,24:24:72.15:726,72,0	1/1:2,24:26:69.15:703,69,0	1/1:2,19:21:48.11:490,48,0	1/1:2,15:17:30.06:306,30,0	1/1:2,21:23:54.12:550,54,0	1/1:2,20:22:51.12:520,51,0	1/1:0,21:21:54.12:551,54,0	1/1:1,27:28:78.17:795,78,0	1/1:6,23:29:66.14:673,66,0	1/1:2,9:11:24.05:245,24,0
chr10	25377730	.	G	GA	8532.19	PASS	AB=0.643;AC=45;AF=0.804;AN=56;BaseQRankSum=-8.322;DP=472;FS=0.000;HRun=10;HaplotypeScore=54.2327;InbreedingCoeff=0.3937;MQ=70.17;MQ0=0;MQRankSum=-2.846;QD=20.12;ReadPosRankSum=3.189;VQSLOD=5.5814;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,8:10:15.04:160,15,0	0/1:1,5:7:9.77:95,0,10	0/1:6,1:8:16.27:16,0,72	0/0:6,0:5:5.92:0,6,43	1/1:7,28:35:34.69:708,35,0	1/1:1,21:22:60.15:640,60,0	1/1:2,6:8:15.04:160,15,0	0/0:22,0:22:47.91:0,48,392	1/1:3,14:17:30.08:320,30,0	1/1:7,14:22:20.43:410,20,0	1/1:5,10:15:30.08:320,30,0	1/1:2,16:18:45.11:479,45,0	1/1:3,13:16:11.45:327,11,0	1/1:5,18:23:48.12:512,48,0	0/0:19,1:20:21.93:0,22,384	1/1:2,17:19:48.06:498,48,0	1/1:4,12:16:14.45:359,14,0	1/1:5,7:12:9.02:96,9,0	1/1:5,11:17:26.65:296,27,0	1/1:3,22:25:65.94:627,66,0	0/1:5,13:18:25.81:368,0,26	1/1:3,17:20:39.01:390,39,0	0/1:5,7:12:28.24:139,0,28	1/1:1,5:6:15.04:160,15,0	1/1:4,17:21:30.08:320,30,0	0/1:4,11:15:10.11:303,0,10	1/1:7,27:34:25.85:668,26,0	1/1:2,5:7:15.04:160,15,0
chr10	25379740	.	ATG	A	1767.20	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=5.744;DP=572;FS=6.071;HRun=0;HaplotypeScore=83.0584;InbreedingCoeff=0.9954;MQ=82.87;MQ0=0;MQRankSum=-4.677;QD=42.08;ReadPosRankSum=2.587;VQSLOD=5.5870;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,25:25:66.23:1077,66,0	0/0:7,0:7:21.07:0,21,427	0/0:20,0:20:45.42:0,45,783	0/0:12,0:12:32.78:0,33,571	0/0:30,0:30:90.30:0,90,1778	0/0:23,0:23:66.23:0,66,1322	0/0:15,0:15:45.12:0,45,834	0/0:31,0:31:93.32:0,93,1861	0/0:14,0:14:42.14:0,42,853	0/0:30,0:30:90.31:0,90,1829	0/0:19,0:19:57.20:0,57,1157	0/0:18,0:18:54.19:0,54,1071	0/0:24,0:24:72.25:0,72,1441	0/0:26,0:26:78.27:0,78,1585	0/0:25,0:25:75.26:0,75,1507	0/0:21,0:21:63.22:0,63,1280	1/1:0,11:11:33.11:538,33,0	1/1:0,6:6:18.06:294,18,0	0/0:15,0:15:45.15:0,45,914	0/0:30,0:30:90.31:0,90,1817	0/0:28,0:28:81.26:0,81,1609	0/0:23,0:23:69.24:0,69,1391	0/0:20,0:20:60.21:0,60,1218	0/0:13,0:13:39.13:0,39,792	0/0:15,0:15:45.15:0,45,908	0/0:27,0:27:81.28:0,81,1621	0/0:27,0:26:81.26:0,81,1591	0/0:17,0:17:51.18:0,51,1036
chr10	25380373	.	A	ATG	1692.46	PASS	AB=0.850;AC=25;AF=0.481;AN=52;BaseQRankSum=-2.805;DP=527;FS=5.337;HRun=0;HaplotypeScore=83.7054;InbreedingCoeff=-0.3573;MQ=61.58;MQ0=8;MQRankSum=1.238;QD=4.31;ReadPosRankSum=-0.619;VQSLOD=1.8772;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:33:8.14:0,8,41	0/1:4,0:4:14.35:58,0,14	./.	./.	0/1:17,7:25:26.13:38,0,26	0/0:15,3:19:2.98:0,3,22	0/1:18,6:24:12.99:80,0,13	0/1:24,0:24:0:0,0,0	0/1:13,2:17:14.33:79,0,14	0/1:18,0:18:13.27:38,0,13	0/1:14,7:21:12.17:120,0,12	1/1:19,1:20:3.40:247,3,0	0/1:19,1:20:20.99:161,0,21	0/1:10,8:17:49.13:117,0,49	0/0:7,0:16:17.03:0,17,84	0/1:18,1:19:67.51:68,0,80	0/0:16,0:21:1.42:0,1,12	0/0:6,0:11:4.61:0,5,26	1/1:17,3:20:9.01:111,9,0	0/1:16,3:19:92.18:92,0,107	0/1:13,5:17:5.53:39,0,6	0/1:16,7:21:43.48:76,0,43	1/1:4,2:7:3.01:44,3,0	1/1:11,5:17:9:129,9,0	0/1:18,7:24:18.61:38,0,19	0/1:16,1:17:19.79:38,0,20	0/1:14,11:25:5.01:171,0,5	0/1:10,1:11:38.68:91,0,39
chr10	25381219	.	C	CT	8020.99	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-1.642;DP=347;FS=0.000;HRun=2;HaplotypeScore=33.6251;InbreedingCoeff=0.4383;MQ=40.34;MQ0=10;MQRankSum=-1.732;QD=23.87;ReadPosRankSum=0.440;VQSLOD=4.3172;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,16:18:36.12:512,36,0	1/1:0,5:5:6.02:86,6,0	0/0:5,0:1:0:0,0,0	0/0:5,0:2:2.62:0,3,20	1/1:1,9:9:18.02:235,18,0	1/1:1,13:11:15.05:216,15,0	1/1:2,13:13:24.08:336,24,0	1/1:4,22:26:66.09:879,66,0	1/1:2,8:9:18.06:259,18,0	1/1:3,13:16:42.11:574,42,0	1/1:0,18:16:20.98:248,21,0	1/1:0,12:7:15.05:215,15,0	1/1:0,15:14:15.05:216,15,0	1/1:1,11:8:12.04:172,12,0	1/1:0,6:3:6.02:86,6,0	1/1:0,10:8:18.06:259,18,0	1/1:0,15:14:33.11:474,33,0	1/1:0,2:2:6.02:86,6,0	1/1:1,13:11:33.11:473,33,0	1/1:3,14:17:21.54:287,22,0	1/1:0,12:12:21.02:262,21,0	1/1:2,8:8:9.03:129,9,0	1/1:0,11:10:24.08:345,24,0	1/1:1,12:11:9.03:130,9,0	1/1:2,24:26:48.16:682,48,0	1/1:0,15:15:45.15:647,45,0	1/1:1,12:6:12.04:173,12,0	1/1:0,1:1:3.01:43,3,0
chr10	25382020	.	TA	T	1382.16	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=4.462;DP=533;FS=3.870;HRun=3;HaplotypeScore=60.5307;InbreedingCoeff=0.9945;MQ=74.05;MQ0=0;MQRankSum=-1.077;QD=30.71;ReadPosRankSum=1.177;VQSLOD=3.5777;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,19:20:54.17:669,54,0	0/0:9,0:9:21.06:0,21,284	0/0:9,0:9:27.09:0,27,389	0/0:11,0:11:25.56:0,26,304	0/0:24,0:24:72.23:0,72,1018	0/0:21,0:21:57.19:0,57,820	0/0:25,0:25:75.22:0,75,1036	0/0:24,0:24:69.21:0,69,946	0/0:19,0:19:54.15:0,54,740	0/0:28,0:28:78.26:0,78,1120	0/0:20,0:20:60.17:0,60,827	0/0:22,0:22:66.19:0,66,914	0/0:32,0:32:96.31:0,96,1363	0/0:13,0:13:39.12:0,39,543	0/0:21,0:21:63.20:0,63,891	0/0:18,0:18:54.17:0,54,759	1/1:0,18:18:54.10:650,54,0	1/1:0,7:7:18:205,18,0	0/0:17,0:17:51.17:0,51,734	0/0:30,0:30:87.22:0,87,1227	0/0:20,0:20:60.20:0,60,864	0/0:13,0:13:39.13:0,39,561	0/0:28,0:28:84.27:0,84,1191	0/0:21,0:21:63.19:0,63,888	0/0:16,0:16:45.15:0,45,648	0/0:15,0:15:45.14:0,45,632	0/0:22,0:22:66.20:0,66,930	0/0:10,0:10:30.10:0,30,432
chr10	25390608	.	AT	A	498.77	PASS	AB=0.960;AC=9;AF=0.643;AN=14;BaseQRankSum=3.021;DP=86;FS=11.262;HRun=1;HaplotypeScore=64.2218;MQ=87.17;MQ0=9;MQRankSum=-2.480;QD=12.17;ReadPosRankSum=2.555;VQSLOD=1.0469;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,3:3:9.03:125,9,0	./.	0/0:16,3:11:11.26:0,11,135	0/1:23,1:12:30.85:31,0,39	./.	./.	./.	0/0:22,0:21:59.32:0,59,731	./.	./.	./.	./.	./.	./.	1/1:1,0:1:2.97:20,3,0	./.	1/1:2,4:4:12.04:166,12,0	1/1:1,6:7:18.53:251,19,0	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.
chr10	25390624	.	C	CAAAAA	696.22	PASS	AB=1.000;AC=10;AF=0.714;AN=14;BaseQRankSum=3.475;DP=86;FS=10.051;HRun=10;HaplotypeScore=90.7454;MQ=100.66;MQ0=1;MQRankSum=-2.313;QD=11.80;ReadPosRankSum=1.087;VQSLOD=-0.7406;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,1:4:9.02:160,9,0	./.	0/1:14,0:12:1.83:21,0,2	0/1:25,0:14:10.97:11,0,76	./.	./.	./.	0/0:26,0:26:63.07:0,63,934	./.	./.	./.	./.	./.	./.	1/1:0,0:1:3.01:71,3,0	./.	1/1:4,2:6:12.04:280,12,0	1/1:4,2:6:14.97:241,15,0	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.
chr10	25390662	.	TCTTTACTAAAAAAAAAAAAAAAAAAAA	T	114.44	PASS	AC=2;AF=0.143;AN=14;BaseQRankSum=1.873;DP=139;FS=1.770;HRun=0;HaplotypeScore=250.8614;MQ=98.29;MQ0=8;MQRankSum=-0.391;QD=8.80;ReadPosRankSum=-0.772;VQSLOD=2.5953;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:6:6.02:0,6,266	./.	0/0:48,0:14:41.81:0,42,1012	0/0:35,0:14:28.15:0,28,509	./.	./.	./.	0/0:18,0:18:54.19:0,54,2883	./.	1/1:0,13:13:21.19:196,21,0	./.	./.	./.	./.	./.	./.	0/0:9,0:9:24.08:0,24,2070	0/0:6,0:5:15.05:0,15,749	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.
chr10	25391617	.	CCTT	C	22283.96	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=12.717;DP=664;FS=9.706;HRun=0;HaplotypeScore=107.0272;InbreedingCoeff=0.9993;MQ=78.61;MQ0=0;MQRankSum=-7.092;QD=44.39;ReadPosRankSum=5.709;VQSLOD=5.9626;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,105,2386	1/1:0,9:9:24.08:409,24,0	0/0:22,0:22:66.21:0,66,1389	0/0:15,0:15:30.14:0,30,805	1/1:1,35:36:96.33:1600,96,0	1/1:3,20:22:48.16:802,48,0	1/1:0,23:23:54.18:921,54,0	0/0:34,0:34:90.30:0,90,1935	1/1:0,17:17:48.16:817,48,0	1/1:0,31:31:93.30:1548,93,0	1/1:0,17:17:45.15:767,45,0	1/1:2,23:25:57.19:972,57,0	1/1:1,22:23:66.23:1125,66,0	1/1:0,19:19:51.17:870,51,0	0/0:29,0:29:84.29:0,84,1908	1/1:0,20:20:57.20:972,57,0	0/0:11,0:11:33.11:0,33,761	0/0:16,0:16:45.15:0,45,1027	1/1:2,18:20:54.17:885,54,0	1/1:0,30:30:84.29:1432,84,0	1/1:0,12:12:27.09:460,27,0	1/1:1,26:27:78.26:1294,78,0	1/1:2,33:35:80.93:1381,81,0	1/1:0,19:19:45.15:767,45,0	1/1:1,29:30:72.25:1228,72,0	1/1:2,30:32:90.29:1483,90,0	1/1:0,37:37:99:1841,108,0	1/1:0,16:17:42.14:712,42,0
chr10	25392213	.	CTTTG	C	14535.33	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=3.807;DP=558;FS=3.468;HRun=0;HaplotypeScore=100.4055;InbreedingCoeff=0.9479;MQ=75.61;MQ0=3;MQRankSum=-3.431;QD=30.09;ReadPosRankSum=7.454;VQSLOD=4.4782;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,16:25:33.11:541,33,0	1/1:1,7:8:18.06:295,18,0	0/0:27,0:25:26.96:0,27,588	0/0:20,0:19:18.99:0,19,487	1/1:10,28:38:75.25:1186,75,0	1/1:4,14:18:33.11:541,33,0	1/1:10,9:19:21.07:344,21,0	0/0:28,0:28:45.15:0,45,1072	1/1:6,13:21:42.13:646,42,0	1/1:5,19:24:60.20:982,60,0	1/1:8,14:22:39.13:637,39,0	1/1:4,12:16:27.09:442,27,0	1/1:4,10:14:21.07:344,21,0	1/1:5,16:22:42.14:667,42,0	1/1:1,14:15:36.12:589,36,0	1/1:7,15:21:30.10:492,30,0	1/1:8,13:21:33.11:541,33,0	1/1:6,2:7:6.02:98,6,0	1/1:14,13:27:39.13:639,39,0	1/1:7,21:28:60.20:982,60,0	1/1:2,8:10:24.08:393,24,0	1/1:4,21:25:57.19:934,57,0	1/1:5,11:16:30.10:491,30,0	1/1:4,7:11:18.06:295,18,0	1/1:7,19:26:54.18:885,54,0	1/1:2,8:10:24.08:393,24,0	1/1:8,18:26:54.18:885,54,0	1/1:4,6:10:18.06:295,18,0
chr10	25395893	.	T	TTACACAC	5578.39	PASS	AB=0.685;AC=26;AF=0.464;AN=56;BaseQRankSum=13.476;DP=652;FS=3.784;HRun=0;HaplotypeScore=161.0085;InbreedingCoeff=-0.5993;MQ=58.88;MQ0=3;MQRankSum=-10.823;QD=10.29;ReadPosRankSum=4.510;VQSLOD=3.7167;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:31:99:235,0,156	0/1:8,0:9:81.25:125,0,81	0/0:26,0:19:48:0,48,608	0/0:37,0:25:71.42:0,71,868	0/1:6,0:24:99:114,0,191	0/1:4,0:26:99:280,0,128	0/1:13,3:31:99:203,0,310	0/0:22,0:27:38.36:0,38,865	0/1:8,1:20:95.57:96,0,245	0/1:13,0:32:99:328,0,342	0/1:3,0:19:59.67:224,0,60	0/1:8,0:31:99:451,0,176	0/1:6,0:25:99:219,0,167	0/1:9,0:23:99:213,0,274	1/1:2,0:21:11.93:244,12,0	0/1:8,0:26:99:554,0,208	0/1:7,0:27:99:283,0,107	0/1:14,0:12:99:100,0,204	0/1:19,0:19:87.44:87,0,419	0/1:8,1:24:99:213,0,203	0/1:10,0:16:57.54:58,0,137	0/1:6,0:19:43.81:44,0,175	0/0:6,0:19:15.05:0,15,193	1/1:2,0:15:6.02:124,6,0	0/1:4,1:22:14.32:402,0,14	0/1:31,0:31:99:306,0,422	0/1:5,0:24:26.12:573,0,26	0/1:4,0:7:99:103,0,136
chr10	25400005	.	G	GTC	14508.38	PASS	AB=0.522;AC=49;AF=0.875;AN=56;BaseQRankSum=-7.275;DP=578;FS=5.934;HRun=0;HaplotypeScore=129.5321;InbreedingCoeff=0.7814;MQ=68.39;MQ0=21;MQRankSum=-2.141;QD=32.82;ReadPosRankSum=4.751;VQSLOD=7.1065;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,19:20:33.11:600,33,0	1/1:2,4:6:6.02:110,6,0	0/0:46,0:23:43.93:0,44,595	0/0:75,0:38:55.60:0,56,912	1/1:6,15:21:36.12:643,36,0	1/1:3,13:16:44.72:740,45,0	1/1:7,10:17:21.07:384,21,0	1/1:1,25:26:72.13:1111,72,0	1/1:3,10:13:26.11:445,26,0	0/1:2,22:24:11.40:1043,0,11	1/1:1,17:18:27.09:494,27,0	1/1:6,6:12:7.16:226,7,0	1/1:5,10:16:30.08:536,30,0	1/1:4,13:17:21.07:379,21,0	0/0:15,0:14:42.14:0,42,615	1/1:6,11:17:31.97:561,32,0	1/1:3,22:25:57.19:1035,57,0	1/1:1,3:4:12:185,12,0	1/1:3,20:24:48.36:930,48,0	1/1:1,15:16:24.08:432,24,0	1/1:7,23:27:45.15:806,45,0	1/1:3,15:17:30.10:549,30,0	1/1:5,18:23:42.10:697,42,0	1/1:8,14:22:18.06:311,18,0	1/1:5,13:17:30.10:549,30,0	1/1:2,12:14:42.10:734,42,0	1/1:4,7:10:21.07:374,21,0	1/1:5,8:13:36.12:638,36,0
chr10	25400041	.	TCTCTCTCTCTCTCTCTCTCTCTCTC	T	2136.79	PASS	AB=0.980;AC=32;AF=0.571;AN=56;BaseQRankSum=2.788;DP=358;FS=38.353;HRun=0;HaplotypeScore=189.2442;InbreedingCoeff=0.1758;MQ=31.78;MQ0=67;MQRankSum=-3.916;QD=8.79;ReadPosRankSum=-1.629;VQSLOD=1.1666;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:8:4.51:0,5,29	0/1:3,0:3:4.36:27,0,4	0/0:8,0:2:5.99:0,6,58	0/0:28,0:1:3.01:0,3,35	1/1:18,1:18:2.21:49,2,0	0/1:11,1:9:3.07:112,0,3	0/1:16,0:13:5.83:58,0,6	1/1:11,0:6:17.96:163,18,0	1/1:6,1:6:11.96:196,12,0	0/1:10,0:6:99:132,0,574	1/1:14,0:13:3.13:23,3,0	0/1:9,0:6:8.37:136,0,8	1/1:10,0:8:8.99:122,9,0	1/1:11,0:11:4.99:81,5,0	0/0:19,0:16:36.11:0,36,1908	0/1:13,0:10:3.71:90,0,4	0/0:20,0:16:36.12:0,36,1678	0/0:10,0:3:6.01:0,6,57	0/1:6,1:5:0.38:280,0,0	1/1:10,0:8:5.69:40,6,0	0/1:18,0:11:0.35:5,0,0	1/1:12,1:12:0.77:17,1,0	0/0:17,2:15:6.47:0,6,20	1/1:16,0:17:0.77:17,1,0	0/1:16,0:11:65.91:66,0,209	1/1:5,0:5:15.05:250,15,0	1/1:10,1:10:23.98:409,24,0	0/1:10,0:7:25.87:26,0,124
chr10	25400044	.	CT	C	559.70	PASS	AB=0.918;AC=29;AF=0.558;AN=52;BaseQRankSum=5.953;DP=378;FS=5.566;HRun=1;HaplotypeScore=163.5788;InbreedingCoeff=0.1343;MQ=29.34;MQ0=61;MQRankSum=-5.113;QD=2.35;ReadPosRankSum=2.426;VQSLOD=-0.2970;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,2:7:1.84:11,2,0	1/1:3,0:3:2.82:27,3,0	./.	./.	0/1:18,2:19:0.20:1,0,0	0/1:12,1:10:2.93:25,0,3	0/1:11,6:14:19.76:52,0,20	1/1:4,6:6:18.06:220,18,0	1/1:6,1:6:5.05:45,5,0	0/1:13,1:10:29.81:30,0,120	0/1:12,1:12:0.36:1,0,0	0/1:11,0:8:2.47:2,0,45	0/1:10,1:9:9.82:32,0,10	1/1:12,0:11:5.23:30,5,0	0/0:18,0:15:25.19:0,25,253	0/1:12,2:11:3.99:7,0,4	0/0:20,0:16:11.07:0,11,396	1/1:9,1:3:2.93:31,3,0	0/1:6,0:5:15.57:24,0,16	0/0:14,0:12:1.97:0,2,7	1/1:13,5:11:0.75:4,1,0	0/0:18,3:20:1.93:0,2,13	0/0:19,3:18:3.72:0,4,27	0/1:17,3:20:0.27:0,0,0	0/0:17,2:14:2.85:0,3,40	1/1:6,1:7:13.55:95,14,0	1/1:11,1:11:7.67:55,8,0	0/1:10,0:7:4.42:4,0,105
chr10	25400046	.	CT	C	456.79	PASS	AB=0.957;AC=22;AF=0.423;AN=52;BaseQRankSum=4.613;DP=386;FS=2.987;HRun=1;HaplotypeScore=170.1688;InbreedingCoeff=0.0125;MQ=29.62;MQ0=60;MQRankSum=-3.638;QD=2.34;ReadPosRankSum=3.589;VQSLOD=-0.1934;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,2:8:1.95:12,2,0	0/1:5,0:5:9.94:13,0,10	./.	./.	0/0:19,0:18:1.35:0,1,8	0/1:13,1:11:19.28:24,0,19	0/1:17,1:15:24.29:44,0,24	1/1:11,0:7:4.19:204,4,0	1/1:7,0:6:6.01:63,6,0	0/1:17,0:13:17.68:18,0,159	0/1:12,2:13:0.36:1,0,0	0/0:12,0:9:11.44:0,11,96	0/1:11,0:9:22.07:22,0,38	1/1:13,0:11:5.74:51,6,0	0/0:19,0:15:25.19:0,25,252	0/0:15,0:12:10.48:0,10,67	0/0:19,0:15:8.06:0,8,375	1/1:9,1:3:1.24:37,1,0	0/1:5,1:5:22.93:56,0,23	0/0:13,1:12:4.65:0,5,19	1/1:15,3:11:0.75:4,1,0	0/0:22,0:21:2.05:0,2,34	0/0:21,1:18:4.28:0,4,26	0/1:20,1:21:0.27:0,0,0	0/0:21,0:16:5.07:0,5,47	0/1:7,0:7:30.91:31,0,33	0/1:12,0:11:12.18:17,0,12	0/0:10,0:7:1.51:0,2,128
chr10	25400066	.	C	CGT	3754.89	PASS	AB=0.968;AC=38;AF=0.731;AN=52;BaseQRankSum=3.956;DP=483;FS=30.715;HRun=0;HaplotypeScore=207.3171;InbreedingCoeff=0.3078;MQ=34.27;MQ0=45;MQRankSum=-2.912;QD=9.73;ReadPosRankSum=-2.630;VQSLOD=1.6883;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:20:19.96:0,20,143	1/1:5,1:6:15.45:138,15,0	./.	./.	1/1:26,1:26:29.97:276,30,0	0/1:17,0:14:41.90:132,0,42	1/1:21,0:18:21.58:165,22,0	0/0:29,0:22:48.60:0,49,377	1/1:10,0:9:11.38:132,11,0	0/1:18,1:16:77.53:384,0,78	1/1:15,2:16:8.58:89,9,0	1/1:16,1:14:19.51:236,20,0	1/1:13,1:12:2.20:181,2,0	1/1:14,3:16:17.20:161,17,0	0/0:23,0:19:42.13:0,42,570	1/1:15,1:13:3.86:167,4,0	0/0:22,0:18:39.07:0,39,495	0/1:10,0:5:5.05:14,0,5	0/1:11,1:10:23.95:173,0,24	1/1:23,0:21:20.98:280,21,0	1/1:21,0:15:9.02:111,9,0	0/1:26,2:27:12.32:168,0,12	1/1:22,3:21:8.15:60,8,0	1/1:21,4:25:2.97:20,3,0	0/1:25,0:20:14.51:188,0,15	1/1:13,1:14:22.82:363,23,0	1/1:14,0:13:13.44:218,13,0	1/1:8,0:6:2.66:99,3,0
chr10	25400073	.	TG	T	215.15	PASS	AC=2;AF=0.037;AN=54;BaseQRankSum=-0.097;DP=583;FS=8.240;HRun=1;HaplotypeScore=231.6265;InbreedingCoeff=0.8026;MQ=36.58;MQ0=39;MQRankSum=0.115;QD=7.97;ReadPosRankSum=-1.561;VQSLOD=-0.2326;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,7:24:35.66:309,36,0	0/0:10,0:10:23.91:0,24,338	./.	0/0:5,0:2:5.95:0,6,55	0/0:31,0:31:47.61:0,48,711	0/0:21,0:18:33.06:0,33,519	0/0:24,0:21:29.33:0,29,444	0/0:34,0:26:68.47:0,68,918	0/0:11,0:10:24.01:0,24,300	0/0:24,0:20:59.54:0,60,813	0/0:24,0:23:23.74:0,24,339	0/0:20,0:17:38.76:0,39,544	0/0:19,0:18:34.64:0,35,509	0/0:19,0:18:31.86:0,32,428	0/0:24,0:20:43.88:0,44,315	0/0:18,0:16:17.84:0,18,452	0/0:20,0:17:39.13:0,39,566	0/0:13,0:8:22.29:0,22,209	0/0:23,0:20:51.92:0,52,714	0/0:27,0:26:53.90:0,54,818	0/0:29,0:22:11.15:0,11,182	0/0:31,0:30:38.42:0,38,588	0/0:26,0:23:17.40:0,17,223	0/0:29,0:29:8.69:0,9,129	0/0:28,0:24:41.65:0,42,606	0/0:18,0:18:51.02:0,51,699	0/0:16,0:16:38.53:0,39,530	0/0:10,0:8:18.03:0,18,228
chr10	25400374	.	T	TA	13620.51	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=5.246;DP=545;FS=6.561;HRun=0;HaplotypeScore=93.7703;InbreedingCoeff=0.9804;MQ=65.29;MQ0=0;MQRankSum=-1.714;QD=29.87;ReadPosRankSum=7.254;VQSLOD=4.3068;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,31:34:77.15:966,77,0	1/1:5,6:11:27.28:298,27,0	0/0:10,0:8:20.86:0,21,193	0/0:13,0:11:8.09:0,8,206	1/1:0,25:25:68.97:751,69,0	1/1:2,18:20:34.45:547,34,0	1/1:0,12:12:26.95:305,27,0	0/0:28,0:28:84.23:0,84,1103	1/1:2,10:12:36.01:400,36,0	1/1:1,20:21:59.87:686,60,0	1/1:1,39:40:99:1282,107,0	1/1:0,18:18:48.14:565,48,0	1/1:2,20:22:53.18:645,53,0	1/1:0,10:10:27.08:326,27,0	0/0:20,0:20:60.18:0,60,793	1/1:4,12:16:40.06:497,40,0	0/0:18,0:18:44.27:0,44,254	1/1:2,12:14:30.80:401,31,0	1/1:1,13:14:36.87:441,37,0	1/1:1,29:30:69.14:795,69,0	1/1:3,12:15:30.55:368,31,0	1/1:0,19:19:48.09:559,48,0	1/1:2,19:21:43.25:538,43,0	1/1:1,7:8:20.71:251,21,0	1/1:4,27:31:63.29:791,63,0	1/1:0,27:26:81.22:963,81,0	1/1:5,16:21:60.14:707,60,0	1/1:0,15:15:45.14:538,45,0
chr10	25400466	.	G	GT	12304.23	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-9.806;DP=532;FS=4.390;HRun=7;HaplotypeScore=67.9213;InbreedingCoeff=0.8845;MQ=81.90;MQ0=0;MQRankSum=-2.664;QD=29.16;ReadPosRankSum=1.092;VQSLOD=5.6089;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,15:18:45.09:520,45,0	1/1:2,6:8:18.06:217,18,0	0/0:17,0:18:33.29:0,33,307	0/0:17,0:17:1.40:0,1,134	1/1:3,26:29:84.22:996,84,0	1/1:1,22:23:63.15:745,63,0	1/1:4,13:17:1.11:294,1,0	0/0:6,0:26:36.19:0,36,105	1/1:1,13:14:33.10:399,33,0	1/1:4,19:24:60.18:724,60,0	1/1:4,18:22:57.13:672,57,0	1/1:5,8:13:28.89:319,29,0	1/1:7,15:23:63.16:726,63,0	1/1:0,21:21:60.18:725,60,0	0/0:25,0:25:60.09:0,60,579	1/1:2,11:13:33.10:399,33,0	0/0:23,0:23:60.06:0,60,571	1/1:1,4:5:12.04:142,12,0	1/1:5,12:18:41.95:470,42,0	1/1:8,28:36:76.11:898,76,0	1/1:2,10:12:33.04:370,33,0	1/1:5,12:17:42.08:476,42,0	1/1:9,14:23:48.14:569,48,0	1/1:0,6:6:18.06:217,18,0	1/1:8,16:24:57.15:673,57,0	1/1:3,14:17:48.15:579,48,0	1/1:5,27:32:78.24:938,78,0	1/1:1,6:7:21.04:238,21,0
chr10	25401166	.	C	CAA	14149.80	PASS	AB=1.000;AC=49;AF=0.875;AN=56;BaseQRankSum=-4.115;DP=568;FS=4.455;HRun=9;HaplotypeScore=75.2625;InbreedingCoeff=0.8097;MQ=80.36;MQ0=3;MQRankSum=-5.662;QD=28.64;ReadPosRankSum=3.418;VQSLOD=5.1570;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,16:18:36.12:554,36,0	1/1:0,8:9:27.09:398,27,0	0/1:17,0:20:35.34:35,0,329	0/0:16,0:15:35.23:0,35,340	1/1:4,11:19:44.08:567,44,0	1/1:3,7:11:24.03:325,24,0	1/1:2,14:19:41.11:571,41,0	0/0:29,0:31:54.01:0,54,678	1/1:4,21:24:60.20:922,60,0	1/1:7,10:17:7.14:457,7,0	1/1:7,14:21:42.01:559,42,0	1/1:0,24:25:48.16:739,48,0	1/1:3,22:25:66.11:939,66,0	1/1:1,22:23:54.18:831,54,0	0/0:27,0:27:63.13:0,63,670	1/1:3,24:28:54.18:814,54,0	1/1:3,16:21:51.12:723,51,0	1/1:0,10:13:26.06:323,26,0	1/1:3,15:19:42.14:625,42,0	1/1:9,17:27:59.57:802,60,0	1/1:1,13:14:24.08:369,24,0	1/1:2,7:12:29.02:360,29,0	1/1:1,11:13:24.07:349,24,0	1/1:4,22:26:39.09:573,39,0	1/1:3,23:26:48.16:722,48,0	1/1:5,17:22:51.16:763,51,0	1/1:3,26:28:36.12:554,36,0	1/1:2,9:11:18.95:273,19,0
chr10	25401206	.	AAAGGGAAGGG	A	547.18	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=-1.046;DP=675;FS=7.033;HRun=0;HaplotypeScore=284.7297;InbreedingCoeff=0.6280;MQ=67.60;MQ0=11;MQRankSum=3.847;QD=14.79;ReadPosRankSum=-1.383;VQSLOD=1.3224;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:36.12:0,36,1036	0/0:9,0:9:21.04:0,21,382	0/0:59,0:42:62.34:0,62,808	0/0:54,0:32:12.18:0,12,378	0/0:20,0:20:45.07:0,45,1038	0/0:16,0:16:36.11:0,36,1021	0/0:22,0:20:45.12:0,45,1265	1/1:9,16:25:48.08:630,48,0	0/0:27,0:27:57.15:0,57,1529	0/0:20,0:20:48.16:0,48,1206	0/0:23,0:23:60.20:0,60,1536	0/0:25,0:25:42.13:0,42,1047	0/0:29,0:29:72.24:0,72,2073	0/0:33,0:33:72.19:0,72,1993	0/0:30,0:29:66.23:0,66,2960	0/0:33,0:32:84.27:0,84,2187	0/0:19,0:19:51.17:0,51,1056	0/1:12,0:11:22.54:23,0,113	0/0:14,0:13:32.98:0,33,642	0/0:16,0:16:42.13:0,42,1152	0/0:15,0:14:21.02:0,21,412	0/0:21,0:20:51.17:0,51,1290	0/0:19,0:19:41.99:0,42,915	0/0:27,0:26:39.13:0,39,774	0/0:24,0:24:42.13:0,42,1289	0/0:20,0:20:55.06:0,55,1142	0/0:33,0:33:66.23:0,66,2053	0/0:10,0:10:18.06:0,18,443
chr10	25404365	.	TA	T	10502.51	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-0.295;DP=510;FS=7.711;HRun=10;HaplotypeScore=74.7776;InbreedingCoeff=0.7671;MQ=78.57;MQ0=1;MQRankSum=-3.176;QD=22.25;ReadPosRankSum=4.516;VQSLOD=5.4813;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,22:25:62.98:547,63,0	1/1:0,13:13:38.99:339,39,0	0/0:15,0:15:0.56:0,1,245	0/0:11,0:12:0.03:0,0,206	1/1:2,29:32:83:709,83,0	1/1:2,18:20:53.99:469,54,0	1/1:3,12:15:35.99:313,36,0	1/1:3,21:24:62.95:540,63,0	1/1:1,14:15:41.99:365,42,0	1/1:2,18:20:53.94:459,54,0	1/1:2,26:28:77.98:677,78,0	1/1:2,16:17:14.81:357,15,0	1/1:3,19:22:53.98:469,54,0	1/1:2,11:13:32.99:286,33,0	0/0:11,0:11:27.06:0,27,291	1/1:0,18:18:53.99:469,54,0	1/1:2,16:18:11.81:331,12,0	1/1:3,11:14:18.90:247,19,0	1/1:1,11:12:29.82:278,30,0	1/1:3,26:29:77.98:677,78,0	1/1:1,9:10:23.99:208,24,0	1/1:2,12:14:35.98:313,36,0	1/1:1,16:17:41.99:365,42,0	1/1:0,8:8:21:182,21,0	1/1:1,23:24:65.99:573,66,0	1/1:4,20:24:56.96:495,57,0	1/1:3,22:25:45.47:550,45,0	1/1:3,11:14:32.97:286,33,0
chr10	25404532	.	A	AACAC	11530.57	PASS	AB=0.614;AC=44;AF=0.786;AN=56;BaseQRankSum=-3.433;DP=624;FS=4.400;HRun=0;HaplotypeScore=105.5666;InbreedingCoeff=0.2431;MQ=67.43;MQ0=22;MQRankSum=1.342;QD=21.92;ReadPosRankSum=0.838;VQSLOD=4.6342;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,0:18:2.98:22,3,0	0/1:4,7:12:35.99:204,0,36	0/0:41,0:19:5.98:0,6,49	0/0:40,0:27:5.67:0,6,73	1/1:15,11:30:30.10:666,30,0	0/1:8,11:27:6.95:632,0,7	0/1:8,13:25:11.19:623,0,11	1/1:24,0:27:30.11:295,30,0	1/1:4,8:12:18.06:432,18,0	1/1:12,16:29:53.54:881,54,0	1/1:4,9:13:15.05:335,15,0	0/1:9,11:22:12.33:674,0,12	1/1:9,8:20:20.37:373,20,0	1/1:8,10:21:26.82:588,27,0	0/0:15,0:17:20.55:0,21,439	1/1:7,14:27:50.64:1042,51,0	1/1:13,2:24:3.81:149,4,0	1/1:8,5:15:8.86:183,9,0	1/1:7,1:8:11.92:133,12,0	1/1:13,10:25:24.08:457,24,0	1/1:10,17:36:24.52:679,25,0	1/1:7,3:10:3.01:72,3,0	1/1:17,11:30:14.79:301,15,0	1/1:4,13:19:39.13:936,39,0	0/1:7,8:18:22.35:352,0,22	1/1:6,8:15:26.81:496,27,0	0/1:7,6:14:25.73:314,0,26	1/1:2,10:13:30.10:691,30,0
chr10	25405092	.	TCATGCATGGAA	T	340.59	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=0.886;DP=626;FS=13.193;HRun=0;HaplotypeScore=315.0226;InbreedingCoeff=0.9301;MQ=73.62;MQ0=0;MQRankSum=-1.637;QD=10.02;ReadPosRankSum=1.142;VQSLOD=0.8584;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:15.48:0,15,231	0/0:6,0:6:18.06:0,18,304	0/0:19,0:18:52.23:0,52,1590	0/0:28,0:27:54.02:0,54,1460	0/0:20,0:19:41.93:0,42,642	0/0:15,0:15:34.04:0,34,492	0/0:20,0:20:47.88:0,48,689	0/0:27,0:27:75.26:0,75,3039	0/0:29,0:29:56.20:0,56,763	0/0:25,0:25:64.44:0,64,898	0/0:12,0:12:29.89:0,30,404	0/0:25,0:25:45.58:0,46,617	0/0:27,0:27:47.18:0,47,455	0/0:30,0:30:63.34:0,63,774	0/0:54,0:54:99:0,154,7187	0/0:39,0:39:71.42:0,71,956	1/1:8,26:34:14.66:429,15,0	0/0:8,0:8:21.02:0,21,305	0/0:18,0:18:42.12:0,42,756	0/0:23,0:23:52.21:0,52,873	0/0:22,0:22:21.35:0,21,526	0/0:27,0:27:66.11:0,66,830	0/0:16,0:16:38.06:0,38,522	0/0:16,0:16:17.89:0,18,257	0/0:27,0:27:52.70:0,53,835	0/0:16,0:16:37.35:0,37,508	0/0:17,0:17:39.06:0,39,561	0/0:7,0:7:15.05:0,15,239
chr10	25405290	.	ACATGCATGGAT	A	5952.61	PASS	AB=0.926;AC=22;AF=0.393;AN=56;BaseQRankSum=2.263;DP=763;FS=11.298;HRun=0;HaplotypeScore=330.2783;InbreedingCoeff=-0.5405;MQ=47.43;MQ0=27;MQRankSum=-6.220;QD=11.45;ReadPosRankSum=-7.106;VQSLOD=1.1551;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:31,0:31:99:344,0,741	0/1:12,0:12:99:124,0,851	0/1:30,0:5:18.71:19,0,49	0/0:38,0:4:6.02:0,6,120	0/1:10,19:29:99:108,0,474	0/1:14,0:14:71.59:72,0,901	0/1:19,0:19:99:107,0,852	0/0:39,0:37:99:0,99,3549	0/1:27,0:27:99:239,0,1020	0/1:27,0:27:99:631,0,922	0/0:13,10:23:3.15:0,3,703	0/1:36,0:36:99:493,0,923	0/1:24,0:24:99:434,0,595	0/1:20,0:20:33.64:34,0,893	0/0:55,0:55:99:0,153,7449	0/1:39,0:39:99:299,0,978	0/0:35,0:35:99:0,99,3990	0/1:10,0:10:59.78:60,0,311	0/1:14,15:26:99:558,0,549	0/1:18,0:18:99:261,0,569	0/0:35,0:32:8.91:0,9,921	0/1:15,24:39:28.82:29,0,863	0/1:18,0:18:99:372,0,705	0/0:17,1:18:7.47:0,7,248	0/1:29,0:29:99:544,0,879	0/1:14,20:34:99:661,0,784	0/1:28,0:28:99:366,0,974	1/1:7,0:7:15.05:199,15,0
chr10	25406410	.	G	GA	493.77	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-4.081;DP=525;FS=9.228;HRun=8;HaplotypeScore=57.6606;InbreedingCoeff=0.8786;MQ=78.76;MQ0=1;MQRankSum=-1.312;QD=22.44;ReadPosRankSum=-0.873;VQSLOD=3.4401;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:38.83:0,39,336	0/0:11,0:11:30.01:0,30,275	0/0:34,0:22:25.77:0,26,232	0/0:27,0:18:17.84:0,18,149	0/0:34,0:34:89.71:0,90,803	0/0:14,0:14:33.01:0,33,302	0/0:16,0:16:48.01:0,48,434	0/0:22,0:22:56.79:0,57,497	0/0:16,0:16:42.02:0,42,384	0/0:22,0:22:53.92:0,54,482	0/0:23,0:24:65.06:0,65,581	0/0:18,0:18:51.03:0,51,466	0/0:15,0:15:26.98:0,27,240	0/0:26,0:26:75.02:0,75,678	0/0:13,0:13:39.02:0,39,357	0/0:14,0:14:7.53:0,8,269	1/1:2,20:22:51.15:589,51,0	0/0:12,0:12:36.02:0,36,329	0/0:19,0:19:47.95:0,48,426	0/0:32,0:32:93.05:0,93,850	0/0:5,0:5:12:0,12,110	0/0:18,0:18:47.99:0,48,432	0/0:16,0:16:36:0,36,326	0/0:8,0:8:18.01:0,18,165	0/0:22,0:22:55.95:0,56,522	0/0:19,0:19:51.01:0,51,459	0/0:22,0:24:49.06:0,49,463	0/0:7,0:7:18.01:0,18,165
chr10	25407841	.	A	AT	21055.25	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-14.707;DP=721;FS=2.335;HRun=0;HaplotypeScore=62.7872;InbreedingCoeff=0.9990;MQ=90.00;MQ0=0;MQRankSum=-5.935;QD=37.67;ReadPosRankSum=7.434;VQSLOD=4.2544;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,13:13:27.09:395,27,0	1/1:1,10:11:24.08:351,24,0	0/0:36,0:36:97.46:0,97,1236	0/0:21,0:21:56.28:0,56,765	1/1:0,35:35:93.18:1297,93,0	1/1:0,33:33:87.24:1245,87,0	1/1:0,16:16:39.13:570,39,0	0/0:41,0:41:99:0,120,1569	1/1:0,21:21:57.19:833,57,0	1/1:1,38:39:99:1538,111,0	1/1:0,20:20:54.03:735,54,0	1/1:0,23:23:54.18:789,54,0	1/1:2,27:29:78.24:1117,78,0	1/1:0,16:16:45.15:658,45,0	0/0:37,0:37:99:0,111,1500	1/1:0,28:28:81.27:1185,81,0	0/0:27,0:27:81.15:0,81,1046	1/1:0,14:14:27.09:394,27,0	1/1:0,24:24:72.14:920,72,0	1/1:0,38:38:99:1345,99,0	1/1:1,14:15:36.12:526,36,0	1/1:0,23:23:54.10:762,54,0	1/1:0,36:36:99:1491,102,0	1/1:0,28:28:72.24:1053,72,0	1/1:1,25:26:66.22:965,66,0	1/1:0,32:32:96.26:1307,96,0	1/1:0,25:25:72.24:1053,72,0	1/1:0,14:14:36.12:525,36,0
chr10	25408317	.	C	CTGTGTGTGTGTG	5497.55	PASS	AB=1.000;AC=51;AF=0.981;AN=52;BaseQRankSum=-1.650;DP=490;FS=5.159;HRun=0;HaplotypeScore=166.6815;InbreedingCoeff=0.0880;MQ=57.62;MQ0=12;MQRankSum=1.361;QD=12.30;ReadPosRankSum=-1.402;VQSLOD=3.5748;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:26:8.87:165,9,0	1/1:10,0:10:9.03:147,9,0	./.	./.	1/1:34,0:34:21.07:496,21,0	1/1:10,0:23:0.87:2,1,0	1/1:13,0:13:6.02:233,6,0	1/1:36,0:35:29.95:539,30,0	1/1:7,0:7:3.01:44,3,0	1/1:14,0:14:24.08:578,24,0	1/1:16,0:15:2.90:63,3,0	1/1:12,0:12:6.02:187,6,0	1/1:13,0:13:4.56:83,5,0	1/1:17,0:15:6.02:136,6,0	1/1:12,0:14:2.37:8,2,0	1/1:7,2:12:6.02:289,6,0	1/1:22,0:21:2.42:6,2,0	1/1:15,0:15:21.54:628,22,0	1/1:12,0:11:4.57:157,5,0	1/1:26,0:25:5.98:140,6,0	1/1:18,0:17:3.01:61,3,0	1/1:14,0:14:9.03:177,9,0	1/1:11,0:11:0.10:0,0,0	1/1:15,0:13:9.03:173,9,0	1/1:24,0:23:11.12:151,11,0	1/1:20,0:19:33.11:816,33,0	1/1:4,1:12:3.01:174,3,0	0/1:10,0:8:25.24:45,0,25
chr10	25408357	.	G	GTGTGTGTGTGTG	3776.26	PASS	AB=1.000;AC=52;AF=0.929;AN=56;BaseQRankSum=-2.008;DP=356;FS=0.000;HRun=0;HaplotypeScore=120.2016;InbreedingCoeff=0.1666;MQ=53.04;MQ0=12;MQRankSum=-0.976;QD=11.07;ReadPosRankSum=1.382;VQSLOD=2.0693;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:22:6.83:132,7,0	1/1:6,0:6:6.02:95,6,0	0/0:15,0:7:0.60:0,1,2	0/1:12,0:5:0:0,0,0	1/1:26,0:26:20.95:430,21,0	0/1:21,0:21:0.38:0,0,0	1/1:6,0:6:3:62,3,0	1/1:19,0:19:5.88:36,6,0	1/1:4,0:4:3.01:44,3,0	1/1:12,0:12:18.06:411,18,0	1/1:12,0:11:2.92:63,3,0	1/1:5,0:6:2.85:77,3,0	1/1:8,0:8:2.95:80,3,0	1/1:6,0:5:3.01:62,3,0	1/1:9,0:8:2.37:8,2,0	1/1:6,0:6:6.02:289,6,0	1/1:4,0:11:4.73:99,5,0	1/1:12,0:12:12.51:285,13,0	1/1:11,0:12:4.26:61,4,0	1/1:15,0:15:5.89:141,6,0	1/1:9,0:8:3.01:61,3,0	1/1:8,0:8:9.03:177,9,0	1/1:4,0:5:0.10:0,0,0	1/1:10,0:7:9.03:173,9,0	1/1:13,14:34:12.73:154,13,0	1/1:21,0:20:30.24:640,30,0	1/1:15,0:14:3.01:174,3,0	1/1:9,0:8:3:26,3,0
chr10	25408364	.	GTA	G	772.07	PASS	AB=0.933;AC=4;AF=0.071;AN=56;BaseQRankSum=1.916;DP=363;FS=10.639;HRun=0;HaplotypeScore=74.9146;InbreedingCoeff=0.3025;MQ=57.61;MQ0=9;MQRankSum=2.110;QD=14.30;ReadPosRankSum=-2.618;VQSLOD=2.0192;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:33.05:0,33,525	0/0:6,0:6:9.03:0,9,152	0/0:16,0:8:3.41:0,3,19	0/1:12,0:6:7.13:7,0,18	0/0:27,0:27:54.18:0,54,897	0/0:22,0:22:24.08:0,24,396	0/0:6,0:6:5.89:0,6,101	1/1:3,23:26:69.20:859,69,0	0/0:4,0:4:9.03:0,9,148	0/0:11,0:11:30.10:0,30,505	0/0:13,0:12:24.05:0,24,354	0/0:6,0:6:9.03:0,9,152	0/0:7,0:7:14.84:0,15,216	0/0:8,0:7:18.06:0,18,300	0/0:10,0:10:27.09:0,27,445	0/0:5,0:5:6.02:0,6,87	0/0:15,0:12:11.51:0,12,100	0/0:10,0:10:24.08:0,24,388	0/0:11,0:11:30.10:0,30,491	0/0:15,0:15:17.85:0,18,269	0/0:7,0:7:9.03:0,9,149	0/0:7,0:7:15.05:0,15,253	0/0:6,0:6:5.98:0,6,97	0/0:8,0:6:9.03:0,9,139	0/0:33,1:33:35.74:0,36,604	0/0:22,0:21:51.17:0,51,829	0/1:14,1:14:14.53:15,0,290	0/0:11,0:9:16.28:0,16,190
chr10	25410351	.	TG	T	953.89	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-5.167;DP=639;FS=12.990;HRun=2;HaplotypeScore=112.2925;InbreedingCoeff=0.9931;MQ=81.00;MQ0=2;MQRankSum=-0.708;QD=28.91;ReadPosRankSum=1.364;VQSLOD=2.0884;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:62.98:0,63,543	0/0:21,0:21:63:0,63,557	0/0:27,0:23:41.16:0,41,433	0/0:34,0:25:46.63:0,47,590	0/0:22,0:23:65.98:0,66,582	0/0:25,0:25:59.96:0,60,513	0/0:21,0:21:59.94:0,60,511	0/0:25,0:24:72.19:0,72,969	0/0:19,0:19:38.99:0,39,338	0/0:21,0:21:62.97:0,63,574	0/0:19,0:19:56.99:0,57,495	0/0:23,0:23:59.97:0,60,531	0/0:28,0:28:74.94:0,75,648	0/0:34,0:34:80.99:0,81,722	0/0:27,0:27:81.26:0,81,1189	0/0:26,0:26:77.98:0,78,677	1/1:2,31:33:81.26:1049,81,0	0/0:19,0:19:50.98:0,51,440	0/0:23,0:23:59.99:0,60,521	0/0:30,0:30:86.80:0,87,755	0/0:12,0:11:23.97:0,24,209	0/0:25,0:25:72.01:0,72,647	0/0:15,0:15:38.85:0,39,335	0/0:9,0:8:20.97:0,21,176	0/0:21,0:21:50.99:0,51,458	0/0:20,0:20:56.94:0,57,505	0/0:24,0:23:57.47:0,57,499	0/0:10,0:10:29.82:0,30,243
chr10	25410353	.	G	GT	12725.60	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-11.816;DP=649;FS=1.357;HRun=8;HaplotypeScore=72.6265;InbreedingCoeff=0.9952;MQ=82.38;MQ0=3;MQRankSum=-1.458;QD=25.60;ReadPosRankSum=2.650;VQSLOD=5.7008;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,1:25:59.66:303,60,0	1/1:2,19:21:57.13:643,57,0	0/0:31,0:26:33.99:0,34,288	0/0:39,0:27:34.64:0,35,260	1/1:3,19:23:57.02:626,57,0	1/1:5,19:25:44.97:499,45,0	1/1:3,18:22:54.16:622,54,0	0/0:23,0:23:54:0,54,486	1/1:0,20:20:39.12:450,39,0	1/1:4,17:21:54.12:592,54,0	1/1:1,19:20:54.16:623,54,0	1/1:6,16:23:41.96:465,42,0	1/1:4,25:29:66.18:751,66,0	1/1:3,29:33:72.08:811,72,0	0/0:27,0:27:78.04:0,78,714	1/1:1,26:27:75.22:866,75,0	0/0:31,0:31:70.10:0,70,264	1/1:1,18:19:51.15:589,51,0	1/1:4,17:21:51.13:575,51,0	1/1:4,25:29:69.13:770,69,0	1/1:1,13:13:23.77:276,24,0	1/1:3,23:26:66.14:733,66,0	1/1:0,15:15:39.11:450,39,0	1/1:2,9:10:15.04:173,15,0	1/1:5,17:22:36.11:415,36,0	1/1:2,17:19:51.15:588,51,0	1/1:1,20:21:56.66:629,57,0	1/1:2,8:10:24.07:277,24,0
chr10	25411002	.	TGATAGATAGATA	T	3741.91	PASS	AB=0.927;AC=33;AF=0.717;AN=46;BaseQRankSum=-0.053;DP=608;FS=6.437;HRun=0;HaplotypeScore=226.7056;InbreedingCoeff=0.2043;MQ=65.20;MQ0=4;MQRankSum=-1.111;QD=8.91;ReadPosRankSum=0.306;VQSLOD=1.6859;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:21:18.26:18,0,67	1/1:6,1:7:3.01:45,3,0	./.	0/0:14,0:12:0:0,0,0	1/1:23,5:28:5.70:142,6,0	1/1:18,8:26:3.01:101,3,0	1/1:19,0:20:3.01:92,3,0	0/0:32,0:32:15.05:0,15,202	1/1:7,7:14:6.02:202,6,0	1/1:26,4:29:15.05:421,15,0	1/1:17,1:18:8.71:144,9,0	1/1:16,7:23:12.03:327,12,0	0/1:29,0:32:99:160,0,152	0/1:21,0:21:48.61:119,0,49	./.	0/1:12,3:16:24.10:218,0,24	0/0:24,0:24:24.08:0,24,908	0/1:11,1:12:34.78:112,0,35	./.	1/1:14,0:21:3.01:92,3,0	1/1:18,0:18:6.02:116,6,0	1/1:28,1:29:3.01:46,3,0	1/1:18,5:23:15.05:364,15,0	./.	0/0:29,0:29:48.14:0,48,943	1/1:20,3:23:15.05:485,15,0	1/1:22,15:37:18:537,18,0	./.
chr10	25411622	.	CTCTCTCTCTCTCTCTCTCTCTCTCTCT	C	6874.27	PASS	AB=0.885;AC=40;AF=0.714;AN=56;BaseQRankSum=5.731;DP=279;FS=8.302;HRun=0;HaplotypeScore=163.6916;InbreedingCoeff=0.6663;MQ=43.12;MQ0=23;MQRankSum=-6.697;QD=41.16;ReadPosRankSum=-4.440;VQSLOD=1.8880;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:24:13.93:0,14,2191	1/1:1,2:3:6.02:446,6,0	0/0:6,0:2:3.01:0,3,120	0/0:9,0:2:5.98:0,6,196	1/1:11,0:11:9.13:118,9,0	1/1:10,1:9:20.90:374,21,0	1/1:9,0:8:14.88:156,15,0	0/0:20,0:19:55.73:0,56,2601	0/1:7,3:10:32.67:754,0,33	1/1:7,0:6:15.05:180,15,0	1/1:8,1:9:8:327,8,0	1/1:5,1:5:14.97:392,15,0	1/1:9,2:11:33.03:930,33,0	0/1:4,0:4:0.08:0,0,0	0/0:25,0:25:32.19:0,32,1954	1/1:7,2:9:23.91:598,24,0	0/0:16,0:16:36.12:0,36,2876	1/1:8,0:5:15.05:179,15,0	1/1:2,1:3:9.03:109,9,0	1/1:5,1:6:8.94:89,9,0	1/1:9,0:7:2.97:20,3,0	1/1:8,1:8:14.27:404,14,0	0/0:10,0:10:0.46:0,0,1	1/1:6,0:6:12.72:81,13,0	1/1:7,0:7:16.55:104,17,0	1/1:8,2:10:30.09:799,30,0	1/1:14,1:14:36.07:593,36,0	1/1:3,1:1:3.01:223,3,0
chr10	25411645	.	TCTCTCC	T	398.75	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=2.010;DP=326;FS=40.810;HRun=0;HaplotypeScore=146.3943;InbreedingCoeff=0.0062;MQ=48.63;MQ0=13;MQRankSum=4.070;QD=3.35;ReadPosRankSum=5.336;VQSLOD=0.9673;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:16:31.58:0,32,232	0/1:7,0:7:35.90:36,0,47	0/0:10,0:5:4.36:0,4,65	0/0:12,0:5:4.95:0,5,49	0/0:18,0:18:0.77:0,1,2	0/0:14,0:13:12.57:0,13,198	0/0:12,0:12:26.69:0,27,178	1/1:14,0:14:31.59:276,32,0	0/1:11,0:11:46.98:47,0,107	0/0:14,0:14:40.77:0,41,267	0/1:15,0:15:14.20:14,0,42	0/1:7,0:7:5.08:5,0,98	0/1:11,0:11:45.97:46,0,109	0/0:9,0:9:11.55:0,12,77	1/1:3,18:21:1.41:45,1,0	0/1:13,0:13:17.03:17,0,148	0/0:11,0:11:23.82:0,24,353	0/0:8,0:7:20.85:0,21,152	0/0:9,0:8:20.82:0,21,148	0/0:10,0:10:8.87:0,9,63	0/0:12,0:11:2.97:0,3,20	0/1:7,0:6:14.75:19,0,15	0/0:15,0:15:15.70:0,16,99	0/0:8,0:8:12.34:0,12,81	0/0:8,0:8:22.51:0,23,140	0/1:8,0:8:28.09:28,0,88	0/0:19,0:18:23.06:0,23,270	0/1:5,0:3:15.45:15,0,33
chr10	25411648	.	CT	C	4098.42	PASS	AB=0.593;AC=45;AF=0.804;AN=56;BaseQRankSum=3.970;DP=341;FS=28.754;HRun=1;HaplotypeScore=127.1619;InbreedingCoeff=0.6071;MQ=50.82;MQ0=11;MQRankSum=-5.976;QD=15.47;ReadPosRankSum=-1.269;VQSLOD=1.8863;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:15:3.33:75,3,0	1/1:2,5:7:14.95:136,15,0	0/0:12,0:6:8.30:0,8,71	0/0:13,0:5:0.77:0,1,23	1/1:1,17:18:0.47:1,0,0	1/1:4,10:13:27.27:213,27,0	1/1:1,12:13:29.75:222,30,0	0/0:15,0:15:35.89:0,36,230	1/1:3,8:11:26.81:216,27,0	1/1:3,11:14:36.11:426,36,0	0/1:5,11:16:19.79:33,0,20	1/1:2,6:8:20.90:179,21,0	1/1:4,8:12:32.91:310,33,0	1/1:0,9:9:8.99:91,9,0	0/0:21,0:21:1.88:0,2,6	1/1:3,11:14:35.80:298,36,0	0/0:15,0:15:17.76:0,18,168	1/1:0,7:7:21.06:251,21,0	1/1:3,6:8:18.06:217,18,0	1/1:3,7:10:9.03:108,9,0	1/1:3,9:12:5.96:45,6,0	1/1:2,5:6:5.97:58,6,0	1/1:2,14:16:3.44:21,3,0	1/1:3,6:9:14.85:100,15,0	1/1:0,8:8:19.52:123,20,0	1/1:4,6:10:30:309,30,0	1/1:6,14:19:51.11:575,51,0	1/1:3,2:3:9:94,9,0
chr10	25411649	.	TCC	T	206.21	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=-4.481;DP=368;FS=4.423;HRun=6;HaplotypeScore=150.2389;InbreedingCoeff=0.5927;MQ=50.33;MQ0=11;MQRankSum=4.403;QD=5.73;ReadPosRankSum=1.546;VQSLOD=-0.1875;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:16:38.41:0,38,266	0/0:8,0:8:13.66:0,14,86	0/0:12,0:6:4.93:0,5,66	0/0:14,0:6:4.95:0,5,49	0/0:18,0:18:0.88:0,1,2	0/0:14,0:13:35.69:0,36,226	0/0:15,0:15:32.66:0,33,224	1/1:3,12:15:35.91:300,36,0	0/0:14,0:14:29.36:0,29,190	0/0:17,0:17:46.74:0,47,314	0/0:19,0:19:15.25:0,15,91	0/0:9,0:9:21.69:0,22,148	0/0:13,0:13:29.77:0,30,198	0/0:9,0:9:11.52:0,12,78	0/1:21,0:21:0.32:1,0,0	0/0:15,0:15:35.19:0,35,235	0/0:17,0:17:38.30:0,38,295	0/0:7,0:7:20.85:0,21,152	0/0:8,0:8:20.82:0,21,148	0/0:11,0:11:8.91:0,9,63	0/0:12,0:13:8.97:0,9,72	0/0:9,0:8:7.29:0,7,42	0/0:16,0:16:15.28:0,15,99	0/0:9,0:10:17.62:0,18,125	0/0:8,0:8:22.51:0,23,140	0/0:12,0:12:25.43:0,25,165	0/0:19,0:19:48.70:0,49,323	0/0:6,0:4:10.20:0,10,71
chr10	25411661	.	TG	T	5988.74	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=3.759;DP=427;FS=6.078;HRun=9;HaplotypeScore=154.4691;InbreedingCoeff=0.8604;MQ=60.02;MQ0=1;MQRankSum=-5.664;QD=17.26;ReadPosRankSum=4.216;VQSLOD=3.6056;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,19:26:51:466,51,0	1/1:1,8:9:21.01:191,21,0	0/0:12,0:8:5.87:0,6,109	0/0:14,0:9:7.72:0,8,84	1/1:4,21:25:18:165,18,0	1/1:2,13:15:36.02:329,36,0	1/1:2,18:20:47.86:438,48,0	0/0:20,0:21:11.46:0,11,93	1/1:2,14:16:39.01:354,39,0	1/1:2,18:20:51:461,51,0	1/1:2,20:22:23.30:219,23,0	1/1:1,9:10:30.02:274,30,0	1/1:2,12:14:39:351,39,0	1/1:2,8:10:14.84:137,15,0	0/0:17,0:17:9:0,9,83	1/1:0,15:15:39.02:357,39,0	0/0:3,0:15:25.73:0,26,150	1/1:0,9:9:24.01:220,24,0	1/1:4,8:11:5.23:198,5,0	1/1:8,6:14:8.98:82,9,0	1/1:4,8:12:9:82,9,0	1/1:1,8:9:12:110,12,0	1/1:4,17:21:20.69:192,21,0	1/1:1,11:12:18.02:165,18,0	1/1:0,10:10:24.01:219,24,0	1/1:2,13:15:36.01:329,36,0	1/1:3,21:24:53.92:486,54,0	1/1:1,6:7:18:165,18,0
chr10	25412020	.	G	GAA	9982.46	PASS	AB=0.556;AC=47;AF=0.839;AN=56;BaseQRankSum=0.274;DP=440;FS=1.798;HRun=10;HaplotypeScore=63.5974;InbreedingCoeff=0.8975;MQ=72.28;MQ0=3;MQRankSum=-3.479;QD=26.91;ReadPosRankSum=4.071;VQSLOD=4.9540;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:26:49.66:175,50,0	1/1:0,3:4:12.04:173,12,0	0/0:19,0:14:38.46:0,38,343	0/0:11,0:8:20.45:0,20,176	1/1:4,17:21:48.16:715,48,0	1/1:5,7:14:26.06:325,26,0	1/1:4,10:17:35.61:490,36,0	0/0:22,0:23:65.87:0,66,653	1/1:2,12:17:39.08:524,39,0	1/1:3,9:15:29.58:396,30,0	1/1:4,17:23:42.10:594,42,0	1/1:5,11:15:24.08:358,24,0	1/1:2,13:17:45.14:639,45,0	1/1:2,18:20:36.12:538,36,0	0/0:16,0:15:42.08:0,42,421	1/1:2,11:13:32.60:456,33,0	1/1:4,0:23:39.93:140,40,0	1/1:6,15:21:39.13:580,39,0	1/1:4,15:23:62.14:825,62,0	1/1:1,10:13:29.07:369,29,0	1/1:2,5:8:18.02:243,18,0	1/1:5,5:11:18.05:252,18,0	1/1:8,9:15:30.10:436,30,0	1/1:1,6:7:21.07:302,21,0	1/1:1,8:11:26.57:351,27,0	1/1:5,12:18:48.11:642,48,0	0/1:2,6:10:0.43:334,0,0	1/1:3,2:6:9.03:126,9,0
chr10	25412233	.	G	GT	9603.47	PASS	AB=1.000;AC=43;AF=0.768;AN=56;BaseQRankSum=5.874;DP=447;FS=0.000;HRun=8;HaplotypeScore=68.4639;InbreedingCoeff=0.9230;MQ=73.14;MQ0=0;MQRankSum=-1.855;QD=27.76;ReadPosRankSum=4.990;VQSLOD=4.9627;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,20:22:51.15:589,51,0	1/1:0,9:9:27.08:312,27,0	0/0:6,0:6:11.03:0,11,84	0/1:8,0:8:0.82:1,0,69	1/1:1,25:26:69.68:795,70,0	1/1:0,20:20:51.15:588,51,0	1/1:3,4:7:12.04:138,12,0	0/0:34,0:34:81.03:0,81,741	1/1:4,17:21:51.15:588,51,0	1/1:2,6:8:18.05:208,18,0	1/1:1,24:25:69.20:793,69,0	1/1:3,15:18:42.12:484,42,0	1/1:1,17:18:51.15:587,51,0	1/1:2,18:20:57.16:649,57,0	0/0:17,0:17:47.97:0,48,425	1/1:1,11:12:33.10:381,33,0	0/0:23,0:23:63.03:0,63,577	1/1:2,8:10:15.04:173,15,0	1/1:6,10:16:36.06:400,36,0	1/1:3,23:26:41.66:704,42,0	1/1:0,12:12:30.09:346,30,0	1/1:1,12:13:36.11:415,36,0	0/0:12,0:12:30.25:0,30,152	0/0:9,0:9:18.41:0,18,93	1/1:1,16:17:42.12:485,42,0	1/1:2,17:19:51.15:588,51,0	1/1:4,8:12:15.04:173,15,0	1/1:0,7:7:18.05:208,18,0
chr10	25413209	.	GTCTCTCTCTTTC	G	6893	PASS	AB=0.958;AC=50;AF=0.893;AN=56;BaseQRankSum=-0.589;DP=508;FS=3.713;HRun=0;HaplotypeScore=150.2030;InbreedingCoeff=0.2660;MQ=65.25;MQ0=10;MQRankSum=-0.950;QD=15.08;ReadPosRankSum=0.582;VQSLOD=3.8540;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:19,0:19:69.41:197,0,69	1/1:4,0:4:8.99:75,9,0	0/0:22,0:14:0.72:0,1,220	0/0:29,0:9:4.93:0,5,73	1/1:25,0:26:57.47:475,57,0	1/1:23,0:23:50.78:490,51,0	1/1:18,0:18:30.07:233,30,0	1/1:23,0:22:51.06:474,51,0	1/1:3,16:18:6.02:166,6,0	1/1:17,0:17:42.03:393,42,0	1/1:3,22:25:5.11:23,5,0	1/1:3,15:18:3.35:58,3,0	1/1:5,16:21:12.04:346,12,0	1/1:20,0:20:46.34:362,46,0	1/1:14,0:14:2.68:11,3,0	1/1:2,15:17:3.90:110,4,0	1/1:13,0:13:28.40:239,28,0	0/1:10,0:10:43.28:216,0,43	1/1:25,0:24:65.77:613,66,0	1/1:19,0:19:44.89:366,45,0	1/1:25,0:25:56.85:480,57,0	1/1:6,2:8:13.70:104,14,0	1/1:15,0:15:35.97:323,36,0	1/1:15,0:16:14.98:123,15,0	1/1:24,0:24:57.84:504,58,0	1/1:13,1:14:35.98:398,36,0	1/1:3,0:16:2.87:25,3,0	1/1:5,0:4:11.83:88,12,0
chr10	25413211	.	CTCTCTCTT	C	6680.82	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=0.173;DP=492;FS=1.126;HRun=0;HaplotypeScore=117.1864;InbreedingCoeff=0.4777;MQ=65.44;MQ0=10;MQRankSum=-1.413;QD=15.15;ReadPosRankSum=1.015;VQSLOD=3.6034;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:19:38.87:307,39,0	1/1:4,0:4:8.99:75,9,0	0/0:22,0:14:0.79:0,1,220	0/0:29,0:9:4.93:0,5,73	1/1:25,0:25:54.78:440,55,0	1/1:23,0:23:50.78:487,51,0	1/1:16,0:16:32.94:372,33,0	1/1:22,0:21:51.06:474,51,0	1/1:19,0:18:5.75:74,6,0	1/1:16,0:16:42.03:393,42,0	1/1:24,0:24:5.05:21,5,0	1/1:18,0:18:2.61:12,3,0	1/1:21,0:21:11.78:180,12,0	1/1:17,0:17:48.09:383,48,0	1/1:2,13:15:3.01:81,3,0	1/1:16,0:16:3.90:65,4,0	1/1:13,0:13:28.44:239,28,0	1/1:11,0:10:13.16:202,13,0	1/1:25,0:24:65.76:570,66,0	1/1:19,0:19:44.89:366,45,0	1/1:23,0:23:56.84:458,57,0	1/1:8,0:8:13.23:104,13,0	1/1:14,0:14:35.95:297,36,0	1/1:13,0:13:14.98:123,15,0	1/1:25,0:24:57.84:516,58,0	1/1:14,0:14:35.99:351,36,0	1/1:16,0:15:0.75:2,1,0	1/1:5,0:4:11.83:88,12,0
chr10	25413719	.	TACACAC	T	3378.78	PASS	AB=0.783;AC=38;AF=0.760;AN=50;BaseQRankSum=1.443;DP=508;FS=2.399;HRun=0;HaplotypeScore=114.5575;InbreedingCoeff=0.3045;MQ=64.93;MQ0=7;MQRankSum=-3.309;QD=9.21;ReadPosRankSum=-0.711;VQSLOD=2.0155;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:33:24.06:0,24,353	1/1:4,1:5:3.01:60,3,0	./.	./.	1/1:18,13:31:24.48:364,24,0	1/1:18,7:24:9.02:158,9,0	1/1:13,0:16:6.02:84,6,0	./.	0/1:7,1:12:24.36:58,0,24	0/1:20,4:23:29.59:210,0,30	1/1:11,0:15:0.89:2,1,0	1/1:7,5:12:6.02:121,6,0	1/1:13,8:21:12.08:355,12,0	1/1:8,0:8:3.01:59,3,0	1/1:8,0:15:18.06:243,18,0	1/1:16,6:22:12.04:242,12,0	0/1:18,0:25:1.22:1,0,29	0/1:11,4:15:7.92:54,0,8	0/0:13,0:13:0.47:0,0,1	1/1:12,5:17:9.03:160,9,0	0/0:10,0:10:3.01:0,3,42	1/1:9,6:15:6.02:121,6,0	1/1:8,5:12:6.02:121,6,0	1/1:9,4:13:6.02:121,6,0	1/1:7,12:20:18.06:318,18,0	1/1:13,3:16:9.03:181,9,0	1/1:16,9:26:18.06:345,18,0	0/0:12,0:12:2.99:0,3,24
chr10	25414787	.	T	TC	18815.20	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=11.802;DP=664;FS=1.683;HRun=4;HaplotypeScore=133.9148;InbreedingCoeff=0.9882;MQ=85.96;MQ0=0;MQRankSum=-5.878;QD=35.23;ReadPosRankSum=4.902;VQSLOD=2.9918;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,39:42:99:1444,108,0	1/1:0,10:10:27.09:369,27,0	0/0:28,0:28:72.18:0,72,786	0/0:16,0:16:10.14:0,10,309	1/1:0,28:28:69.23:942,69,0	1/1:1,20:21:51.17:698,51,0	1/1:1,21:22:45.15:615,45,0	0/0:26,0:26:69.19:0,69,782	1/1:0,20:20:57.19:780,57,0	1/1:1,25:27:75.21:1001,75,0	1/1:1,20:21:57.19:778,57,0	1/1:1,25:26:72.24:985,72,0	1/1:1,33:34:93.31:1271,93,0	1/1:1,18:19:54.18:738,54,0	0/0:36,0:36:99:0,105,1191	1/1:1,22:23:69.23:943,69,0	0/0:24,0:23:72.17:0,72,796	1/1:0,9:9:24.08:328,24,0	1/1:4,18:22:60.18:802,60,0	1/1:1,27:28:81.21:1080,81,0	1/1:3,20:23:60.13:798,60,0	1/1:0,23:23:63.21:855,63,0	1/1:2,19:21:42.13:574,42,0	1/1:1,18:19:42.14:574,42,0	1/1:3,27:30:60.20:819,60,0	1/1:2,26:28:75.25:1025,75,0	1/1:2,27:29:75.25:1025,75,0	1/1:0,9:9:27.09:369,27,0
chr10	25416086	.	AT	A	985.97	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=6.524;DP=471;FS=3.452;HRun=1;HaplotypeScore=44.7252;InbreedingCoeff=0.6994;MQ=73.05;MQ0=0;MQRankSum=-0.344;QD=26.65;ReadPosRankSum=-3.378;VQSLOD=2.5424;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:33.11:0,33,516	0/0:14,0:14:42.13:0,42,634	0/0:6,0:6:12.34:0,12,192	0/1:9,0:9:4.37:4,0,153	0/0:25,0:25:75.24:0,75,1137	0/0:18,0:18:54.18:0,54,845	0/0:12,0:12:36.12:0,36,563	1/1:0,28:28:81.24:1080,81,0	0/0:13,0:13:39.13:0,39,607	0/0:18,0:18:54.17:0,54,812	0/0:19,0:19:57.15:0,57,824	0/0:13,0:13:39.13:0,39,610	0/0:29,0:29:87.30:0,87,1360	0/0:12,0:12:36.12:0,36,550	0/0:26,0:26:78.24:0,78,1174	0/0:14,0:14:42.14:0,42,657	0/0:19,0:19:57.17:0,57,866	0/0:12,0:12:36.12:0,36,549	0/0:19,0:19:57.15:0,57,831	0/0:16,0:16:48.16:0,48,749	0/0:12,0:12:36.12:0,36,550	0/0:7,0:7:21.04:0,21,284	0/0:22,0:22:66.22:0,66,1031	0/0:11,0:11:32.94:0,33,420	0/0:20,0:20:60.17:0,60,880	0/0:26,0:26:78.24:0,78,1179	0/0:31,0:31:93.28:0,93,1396	0/0:9,0:9:27.05:0,27,375
chr10	25416284	.	A	AG	15154.02	PASS	AB=1.000;AC=47;AF=0.839;AN=56;BaseQRankSum=-1.493;DP=546;FS=3.217;HRun=0;HaplotypeScore=88.7348;InbreedingCoeff=0.9125;MQ=69.43;MQ0=1;MQRankSum=-0.380;QD=33.45;ReadPosRankSum=4.183;VQSLOD=4.5556;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,20:21:28.30:621,28,0	1/1:0,8:8:24.08:357,24,0	0/0:16,0:9:7.95:0,8,221	0/1:18,0:15:0.10:0,0,219	1/1:1,30:31:86.31:1165,86,0	1/1:3,26:29:62.69:924,63,0	1/1:0,9:9:24.08:357,24,0	0/0:33,0:34:89.47:0,89,746	1/1:0,11:12:18.06:257,18,0	1/1:2,24:26:78.23:1108,78,0	1/1:0,24:24:71.24:925,71,0	1/1:1,13:14:32.85:490,33,0	1/1:0,27:27:51.17:755,51,0	1/1:0,13:13:36.12:532,36,0	0/0:28,0:28:84.27:0,84,1158	1/1:1,16:17:48.15:694,48,0	0/0:1,0:15:38.36:0,38,164	1/1:1,19:20:48.15:684,48,0	1/1:1,12:13:31.96:427,32,0	1/1:1,29:30:76.28:1000,76,0	1/1:0,7:7:21.07:312,21,0	1/1:0,15:15:41.38:460,41,0	1/1:0,17:17:48.63:713,49,0	1/1:1,14:15:23.82:357,24,0	1/1:0,21:21:51.17:757,51,0	1/1:0,29:29:86.45:1203,86,0	1/1:3,21:24:29.18:609,29,0	1/1:0,13:13:30.10:446,30,0
chr10	25416285	.	AG	A	8814.71	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=6.100;DP=539;FS=1.887;HRun=1;HaplotypeScore=110.0941;InbreedingCoeff=0.9412;MQ=69.42;MQ0=1;MQRankSum=-1.592;QD=18.48;ReadPosRankSum=2.437;VQSLOD=5.3252;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:21:47.45:323,47,0	1/1:8,0:8:23.82:168,24,0	0/0:16,0:9:4.47:0,4,191	0/0:18,0:15:29.01:0,29,306	1/1:30,0:30:87.29:598,87,0	1/1:28,0:28:66.75:470,67,0	1/1:9,0:9:23.86:173,24,0	1/1:2,33:35:82.40:1153,82,0	1/1:12,0:12:17.67:116,18,0	1/1:26,0:26:75.58:546,76,0	1/1:24,0:24:66.75:429,67,0	1/1:14,0:14:35.78:262,36,0	1/1:27,0:27:50.37:347,50,0	1/1:13,0:13:35.71:252,36,0	0/0:28,0:28:84.25:0,84,1109	1/1:17,0:17:45.94:323,46,0	1/1:15,0:15:41.47:272,41,0	1/1:19,0:19:42.77:271,43,0	1/1:12,0:12:25.54:217,26,0	1/1:28,0:28:82.66:557,83,0	1/1:7,0:7:20.82:144,21,0	1/1:14,0:14:41.13:264,41,0	1/1:17,0:17:47.26:324,47,0	1/1:15,0:15:26.81:193,27,0	1/1:21,0:21:50.69:366,51,0	1/1:29,0:29:84.16:577,84,0	1/1:23,0:23:37.51:274,38,0	1/1:13,0:13:29.60:197,30,0
chr10	25416286	.	G	GAA	14639.26	PASS	AB=1.000;AC=47;AF=0.839;AN=56;BaseQRankSum=-1.966;DP=542;FS=3.337;HRun=7;HaplotypeScore=99.9775;InbreedingCoeff=0.8607;MQ=69.24;MQ0=1;MQRankSum=-0.498;QD=31.48;ReadPosRankSum=3.645;VQSLOD=4.7038;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:21:45.15:602,45,0	1/1:8,0:8:24.08:330,24,0	0/0:16,0:9:24.61:0,25,217	0/0:18,0:15:17.06:0,17,284	1/1:30,0:30:87.28:1174,87,0	1/1:27,1:28:69.21:924,69,0	1/1:9,0:9:24.08:335,24,0	0/1:36,0:36:23.13:23,0,92	1/1:12,0:12:18.04:228,18,0	1/1:24,2:26:78.26:1105,78,0	1/1:24,0:24:65.43:871,65,0	1/1:14,0:14:36.11:490,36,0	1/1:27,0:27:54.13:716,54,0	1/1:13,0:13:36.12:493,36,0	0/0:28,0:28:81.27:0,81,1079	1/1:16,1:17:48.16:677,48,0	0/0:15,0:15:36.12:0,36,142	1/1:19,0:19:48.63:634,49,0	1/1:13,0:13:33.57:451,34,0	1/1:28,0:28:75.20:982,75,0	1/1:7,0:7:21.07:286,21,0	1/1:13,0:13:36.11:465,36,0	1/1:17,0:17:49.04:656,49,0	1/1:15,0:15:27.08:355,27,0	1/1:21,0:21:51.17:710,51,0	1/1:30,0:30:84.25:1155,84,0	1/1:23,1:24:30.23:579,30,0	1/1:13,0:13:30.10:399,30,0
chr10	25418094	.	TA	T	10484.33	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=5.159;DP=486;FS=9.044;HRun=8;HaplotypeScore=113.1886;InbreedingCoeff=0.9563;MQ=72.93;MQ0=3;MQRankSum=-0.793;QD=25.63;ReadPosRankSum=4.565;VQSLOD=4.0297;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,21:21:60.10:579,60,0	1/1:0,8:8:24.04:232,24,0	0/0:10,1:12:26.75:0,27,292	0/0:14,0:13:10.38:0,10,170	1/1:3,25:28:75.12:724,75,0	1/1:3,14:15:38.98:364,39,0	1/1:2,14:15:36.06:348,36,0	0/0:26,0:26:66.19:0,66,778	1/1:1,17:18:51.08:492,51,0	1/1:2,22:24:66.10:637,66,0	1/1:3,15:18:45.07:434,45,0	1/1:2,9:11:24.03:232,24,0	1/1:1,19:20:54.08:521,54,0	1/1:2,24:26:69.10:666,69,0	0/0:12,0:12:36.11:0,36,435	1/1:1,14:15:42.07:406,42,0	0/0:1,0:13:34.50:0,35,175	1/1:1,3:4:9.01:87,9,0	1/1:0,16:16:48.05:452,48,0	1/1:2,24:26:66.09:636,66,0	1/1:1,5:6:15.02:145,15,0	1/1:3,21:24:60.09:579,60,0	1/1:2,24:26:72.12:695,72,0	1/1:2,3:5:9.01:87,9,0	1/1:0,23:23:69.11:666,69,0	1/1:2,13:15:39.05:372,39,0	1/1:3,33:36:99:956,99,0	1/1:0,6:6:18.03:174,18,0
chr10	25421839	.	AT	A	427.01	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.268;DP=404;FS=1.521;HRun=9;HaplotypeScore=41.6745;InbreedingCoeff=0.7971;MQ=66.43;MQ0=17;MQRankSum=-0.468;QD=16.42;ReadPosRankSum=-4.318;VQSLOD=2.3324;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:24:60.18:0,60,692	0/0:5,0:5:12.02:0,12,128	0/0:13,0:8:15.02:0,15,156	0/0:4,0:4:3.01:0,3,32	0/0:14,0:14:38.95:0,39,430	0/0:15,0:15:45.13:0,45,519	0/0:17,0:15:42.05:0,42,456	1/1:7,19:25:57.02:522,57,0	0/0:13,0:13:33.10:0,33,381	0/0:10,0:10:27.03:0,27,296	0/0:19,0:19:54.16:0,54,618	0/0:15,1:16:20.36:0,20,420	0/0:12,0:12:33.10:0,33,381	0/0:10,0:10:27.08:0,27,312	0/0:2,0:15:37.23:0,37,206	0/0:8,0:8:24.07:0,24,277	0/0:18,0:14:42.12:0,42,483	0/0:16,0:16:38.70:0,39,424	0/0:14,0:13:30.09:0,30,346	0/0:16,0:16:45.09:0,45,504	0/0:16,0:13:30.07:0,30,336	0/0:14,0:14:36.11:0,36,415	0/0:14,0:13:33.10:0,33,381	0/0:14,0:14:36.11:0,36,415	0/0:11,0:10:27.04:0,27,297	0/0:20,0:20:51.15:0,51,589	0/0:17,0:15:14.69:0,15,422	0/0:10,0:9:27.08:0,27,312
chr10	25425155	.	AACACACACACACACAC	A	965.06	PASS	AB=0.833;AC=3;AF=0.054;AN=56;BaseQRankSum=0.309;DP=425;FS=1.296;HRun=0;HaplotypeScore=203.4833;InbreedingCoeff=0.3684;MQ=48.89;MQ0=5;MQRankSum=-1.927;QD=35.74;ReadPosRankSum=1.983;VQSLOD=2.4590;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:22:9.02:0,9,203	0/0:5,0:5:9.03:0,9,266	0/0:12,0:7:6.02:0,6,128	0/0:7,0:5:3:0,3,29	0/0:25,0:25:23.53:0,24,561	0/0:18,0:18:23.95:0,24,473	0/0:11,0:11:24.07:0,24,679	0/0:21,0:20:24.08:0,24,742	0/0:17,0:16:26.29:0,26,430	0/0:24,0:24:18.93:0,19,967	0/0:20,0:19:11.87:0,12,195	0/0:12,0:11:21.03:0,21,394	0/0:12,0:12:26.94:0,27,419	0/0:8,0:8:9.03:0,9,224	1/1:6,6:12:18.06:745,18,0	0/0:15,0:15:26.82:0,27,512	0/1:12,0:15:61.03:323,0,61	0/0:14,0:13:33.11:0,33,947	0/0:12,0:12:18.06:0,18,415	0/0:27,0:27:36.12:0,36,850	0/0:12,0:12:6.02:0,6,164	0/0:15,0:15:11.89:0,12,132	0/0:12,0:12:5.62:0,6,187	0/0:8,0:8:12.04:0,12,360	0/0:14,0:14:9.03:0,9,172	0/0:19,0:19:51.09:0,51,1365	0/0:23,0:23:29.47:0,29,502	0/0:13,0:13:12.04:0,12,457
chr10	25425189	.	CACACACACAT	C	5096.37	PASS	AB=0.996;AC=41;AF=0.732;AN=56;BaseQRankSum=6.711;DP=489;FS=6.365;HRun=0;HaplotypeScore=154.3180;InbreedingCoeff=-0.0711;MQ=53.00;MQ0=10;MQRankSum=-2.801;QD=11.33;ReadPosRankSum=5.822;VQSLOD=2.2791;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:24:21.41:0,21,186	1/1:4,0:4:3.01:41,3,0	0/1:14,0:8:2.21:2,0,111	0/0:14,0:4:12:0,12,120	1/1:29,2:31:6.49:140,6,0	1/1:16,1:17:4.09:327,4,0	0/1:12,0:11:74.50:176,0,75	0/1:24,0:22:47.04:47,0,440	0/1:16,0:16:8.98:237,0,9	0/1:18,0:17:9.97:305,0,10	1/1:20,1:21:9.03:183,9,0	1/1:15,0:14:8.71:122,9,0	1/1:12,1:13:21.07:360,21,0	1/1:11,0:11:5.81:89,6,0	0/1:18,0:18:99:221,0,158	1/1:14,2:16:0.93:392,1,0	0/1:20,0:20:84.41:133,0,84	0/1:20,0:19:99:236,0,143	1/1:13,0:12:22.12:272,22,0	1/1:28,0:28:8.10:315,8,0	1/1:14,0:13:3.01:40,3,0	1/1:10,1:11:8.94:149,9,0	0/1:16,0:16:17.95:35,0,18	1/1:11,0:11:14.94:131,15,0	1/1:26,1:27:9.03:128,9,0	0/1:21,1:22:51.23:498,0,51	1/1:26,2:28:27.09:487,27,0	0/1:10,0:10:32.16:32,0,122
chr10	25425191	.	CACACACAT	C	8111.02	PASS	AB=0.799;AC=42;AF=0.750;AN=56;BaseQRankSum=5.281;DP=465;FS=10.648;HRun=0;HaplotypeScore=125.6541;InbreedingCoeff=0.1056;MQ=55.04;MQ0=10;MQRankSum=-3.253;QD=19.93;ReadPosRankSum=4.751;VQSLOD=3.2175;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:22:3.94:0,4,104	1/1:0,2:2:3.01:86,3,0	0/1:14,0:8:2.31:2,0,111	0/0:15,0:5:14.99:0,15,144	1/1:4,24:28:11.97:158,12,0	1/1:3,14:17:21.07:586,21,0	0/1:9,2:10:31.39:267,0,31	0/0:20,0:18:2.16:0,2,374	0/1:2,13:15:17.51:494,0,18	1/1:3,11:13:26.98:441,27,0	1/1:2,17:19:9.03:240,9,0	1/1:1,14:14:8.82:258,9,0	1/1:2,11:13:21.07:584,21,0	1/1:0,10:10:5.81:165,6,0	0/1:19,0:19:99:135,0,181	1/1:4,13:17:20.90:565,21,0	0/1:20,0:20:84.75:91,0,85	0/1:18,2:19:45.80:403,0,46	1/1:2,13:14:35.86:533,36,0	1/1:1,27:28:24.08:691,24,0	1/1:2,11:12:3.01:86,3,0	1/1:10,0:10:8.93:116,9,0	1/1:2,12:14:3.01:86,3,0	1/1:8,1:9:17.94:200,18,0	1/1:2,24:26:9.03:253,9,0	0/1:3,17:20:8.10:859,0,8	1/1:2,26:29:27.09:736,27,0	0/1:2,7:9:53.83:77,0,54
chr10	25425443	.	T	TACACACAC	8078.73	PASS	AC=52;AF=1.000;AN=52;DP=480;FS=0.000;HRun=0;HaplotypeScore=156.4141;InbreedingCoeff=-0.0452;MQ=55.28;MQ0=6;QD=18.70;VQSLOD=4.1529;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:28:14.97:387,15,0	1/1:7,0:7:14.64:209,15,0	./.	./.	1/1:25,0:25:24.04:416,24,0	1/1:24,0:23:24.06:510,24,0	1/1:9,1:9:9.03:255,9,0	1/1:29,0:28:23.24:277,23,0	1/1:12,0:11:14.26:289,14,0	1/1:17,0:17:18.05:322,18,0	1/1:22,0:21:3.01:58,3,0	1/1:3,2:9:6.02:163,6,0	1/1:7,0:7:6.02:146,6,0	1/1:9,0:9:18.03:353,18,0	1/1:11,0:10:18.06:315,18,0	1/1:9,2:11:18.53:509,19,0	1/1:17,0:17:8.82:134,9,0	1/1:11,1:13:12.02:213,12,0	1/1:25,0:24:38.25:752,38,0	1/1:11,3:17:3.90:125,4,0	1/1:17,0:14:12.04:344,12,0	1/1:16,0:16:15.03:334,15,0	1/1:7,5:15:5.98:185,6,0	1/1:17,0:17:6.45:189,6,0	1/1:14,7:23:12.04:410,12,0	1/1:24,0:24:29.78:582,30,0	1/1:12,3:19:15.05:447,15,0	1/1:5,0:5:6.02:157,6,0
chr10	25428173	.	TAA	T	9496.37	PASS	AB=0.909;AC=49;AF=0.875;AN=56;BaseQRankSum=1.346;DP=441;FS=0.000;HRun=12;HaplotypeScore=59.9220;InbreedingCoeff=0.8339;MQ=74.81;MQ0=3;MQRankSum=-2.225;QD=23.45;ReadPosRankSum=2.165;VQSLOD=4.5066;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:13:39.13:0,39,563	1/1:1,6:7:18.04:183,18,0	0/0:10,0:10:18.03:0,18,214	0/1:8,1:8:8.91:9,0,113	1/1:3,18:21:54.11:549,54,0	1/1:1,21:22:54.12:549,54,0	1/1:2,9:11:24.05:244,24,0	1/1:5,25:30:59.99:648,60,0	1/1:3,14:17:42.09:427,42,0	1/1:2,14:16:42.08:427,42,0	1/1:1,16:18:44.82:439,45,0	1/1:1,13:14:33.07:336,33,0	1/1:1,13:14:33.06:336,33,0	1/1:1,15:16:36.07:366,36,0	0/0:12,0:12:30.10:0,30,446	1/1:1,20:20:57.13:580,57,0	1/1:4,12:16:33.04:336,33,0	1/1:0,3:3:9.02:92,9,0	1/1:0,15:15:45.06:447,45,0	1/1:3,18:20:51.10:519,51,0	1/1:1,15:15:33.07:336,33,0	1/1:1,11:13:35.81:348,36,0	1/1:5,17:22:42.06:427,42,0	1/1:1,9:11:20.78:266,21,0	1/1:4,15:19:43.79:456,44,0	1/1:1,18:19:54.12:549,54,0	1/1:8,13:22:26.72:327,27,0	1/1:1,10:11:30.07:305,30,0
chr10	25429134	.	G	GCACACACACACACA	6657.99	PASS	AB=1.000;AC=45;AF=0.833;AN=54;BaseQRankSum=-5.352;DP=649;FS=0.000;HRun=0;HaplotypeScore=248.1486;InbreedingCoeff=0.3919;MQ=55.25;MQ0=15;MQRankSum=2.158;QD=12.59;ReadPosRankSum=-0.211;VQSLOD=3.4488;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:39:6.02:0,6,79	0/1:9,0:9:0:0,0,0	1/1:32,0:23:0.89:2,1,0	./.	1/1:21,0:20:6.02:91,6,0	1/1:16,0:16:0.89:3,1,0	1/1:29,0:28:1.68:48,2,0	0/0:15,0:15:2.97:0,3,21	1/1:28,0:28:24.06:659,24,0	1/1:23,0:23:15.04:261,15,0	1/1:11,0:10:3.48:61,3,0	0/1:22,0:22:5.25:36,0,5	1/1:20,0:20:15.05:473,15,0	1/1:15,4:23:3.01:199,3,0	1/1:24,0:24:9.01:179,9,0	1/1:35,0:34:19:602,19,0	0/0:20,0:29:16.50:0,17,617	1/1:17,0:16:11.15:161,11,0	1/1:13,0:13:6.02:176,6,0	1/1:14,0:14:9.48:196,9,0	0/1:47,0:45:52.99:454,0,53	1/1:26,0:26:6.02:158,6,0	1/1:24,0:23:11.76:332,12,0	1/1:26,0:26:15.03:310,15,0	1/1:18,0:17:3.95:48,4,0	1/1:22,0:22:33.96:702,34,0	1/1:18,0:16:23.29:794,23,0	1/1:11,0:11:16.29:712,16,0
chr10	25430049	.	GA	G	8893.36	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=1.927;DP=622;FS=0.411;HRun=8;HaplotypeScore=112.9898;InbreedingCoeff=0.8961;MQ=78.96;MQ0=4;MQRankSum=-2.674;QD=18.26;ReadPosRankSum=-0.639;VQSLOD=3.7978;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,99,1195	1/1:11,1:12:29.32:203,29,0	0/0:42,0:26:37.16:0,37,342	0/0:23,0:13:1.79:0,2,98	1/1:37,0:37:87.37:567,87,0	1/1:18,5:23:60.38:429,60,0	1/1:19,1:20:57.69:414,58,0	1/1:17,9:26:56.15:484,56,0	1/1:28,0:28:51.01:486,51,0	1/1:25,1:26:62.79:534,63,0	1/1:22,2:24:54.50:377,55,0	1/1:15,2:17:31.79:308,32,0	1/1:14,1:15:17.93:183,18,0	1/1:23,0:23:59.69:397,60,0	0/0:16,0:16:48.10:0,48,545	1/1:25,0:25:68.39:509,68,0	0/0:14,0:14:38.97:0,39,338	1/1:15,1:16:39.69:280,40,0	1/1:18,2:20:55.91:431,56,0	1/1:17,0:17:43.70:294,44,0	1/1:9,2:11:26.82:218,27,0	1/1:15,2:17:37.41:289,37,0	1/1:22,4:26:58.09:524,58,0	1/1:20,0:20:21.74:291,22,0	1/1:18,1:19:41.41:311,41,0	1/1:20,6:26:77.33:657,77,0	1/1:30,2:32:81.05:579,81,0	1/1:6,1:7:1.18:128,1,0
chr10	25430644	.	CGTGT	C	1939.77	PASS	AB=0.843;AC=41;AF=0.820;AN=50;BaseQRankSum=0.169;DP=547;FS=1.732;HRun=0;HaplotypeScore=94.6121;InbreedingCoeff=0.1431;MQ=59.42;MQ0=13;MQRankSum=0.838;QD=4.71;ReadPosRankSum=1.003;VQSLOD=1.6916;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:42:50.50:0,50,654	0/1:11,1:12:18.76:40,0,19	./.	./.	1/1:12,5:16:2.98:47,3,0	0/1:16,1:19:0.54:81,0,1	1/1:21,5:26:5.75:93,6,0	./.	1/1:5,9:15:12.04:186,12,0	1/1:10,0:10:5.85:63,6,0	1/1:11,9:20:9.33:140,9,0	0/0:20,0:22:17.77:0,18,252	1/1:9,6:17:9.02:121,9,0	1/1:16,0:22:5.68:39,6,0	1/1:9,0:16:3:28,3,0	1/1:13,8:21:11.42:148,11,0	0/1:12,2:19:38.47:96,0,38	0/1:4,3:8:37.54:38,0,79	1/1:17,0:14:8:51,8,0	1/1:17,0:17:11.98:117,12,0	0/1:46,0:45:12.18:136,0,12	1/1:17,0:18:5.82:66,6,0	1/1:11,6:17:5.72:62,6,0	1/1:9,13:22:15.52:233,16,0	1/1:9,3:12:3.01:47,3,0	1/1:12,5:17:17.61:161,18,0	1/1:12,0:12:4.72:34,5,0	1/1:8,0:7:4.16:53,4,0
chr10	25434612	.	A	AAAAC	24359.10	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-1.051;DP=646;FS=4.805;HRun=0;HaplotypeScore=150.7571;InbreedingCoeff=0.9909;MQ=65.55;MQ0=7;MQRankSum=-3.264;QD=45.45;ReadPosRankSum=2.144;VQSLOD=5.5038;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:23:55.36:0,55,893	1/1:9,2:11:27.09:469,27,0	0/0:22,0:13:37.69:0,38,484	0/0:19,0:14:36.02:0,36,521	1/1:27,7:34:84.28:1420,84,0	1/1:24,0:24:72.23:1279,72,0	1/1:19,0:18:50.92:801,51,0	1/1:38,0:38:99:1634,99,0	1/1:24,3:27:78.26:1341,78,0	1/1:21,3:24:69.18:1303,69,0	1/1:26,1:27:75.22:1167,75,0	1/1:24,3:27:78.08:1251,78,0	1/1:21,8:29:78.26:1312,78,0	1/1:18,6:24:66.20:1069,66,0	0/0:28,0:27:72.10:0,72,1109	1/1:14,5:19:54.18:886,54,0	0/0:17,0:17:18.73:0,19,460	1/1:17,0:17:39.06:589,39,0	1/1:18,1:18:48.16:883,48,0	1/1:19,6:25:69.23:1125,69,0	1/1:17,0:17:36.05:564,36,0	1/1:17,4:21:63.19:1044,63,0	1/1:15,4:19:51.16:753,51,0	1/1:16,2:18:36.99:592,37,0	1/1:22,6:28:84.28:1404,84,0	1/1:24,8:32:84.27:1696,84,0	1/1:28,4:33:89.70:1527,90,0	1/1:2,2:4:12.04:252,12,0
chr10	25434658	.	G	GATAA	5583.93	PASS	AB=0.893;AC=31;AF=0.554;AN=56;BaseQRankSum=4.139;DP=646;FS=0.000;HRun=0;HaplotypeScore=218.1468;InbreedingCoeff=-0.2777;MQ=51.00;MQ0=9;MQRankSum=1.389;QD=9.50;ReadPosRankSum=3.609;VQSLOD=3.8943;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:19:13.54:0,14,359	0/1:9,2:11:40.49:59,0,40	0/0:3,0:2:3.01:0,3,49	0/0:7,0:5:8.99:0,9,87	0/1:30,7:37:71.45:227,0,71	0/1:32,0:32:28.06:132,0,28	0/1:16,0:16:47.69:48,0,87	1/1:38,0:37:53.17:527,53,0	0/1:14,3:17:42.36:188,0,42	1/1:29,2:31:71.80:820,72,0	0/1:34,0:35:92.07:92,0,129	0/1:17,3:20:77.34:77,0,103	0/1:17,7:24:23.77:289,0,24	0/1:23,6:29:35.45:242,0,35	0/0:28,0:26:18.01:0,18,340	0/1:15,5:20:40.69:83,0,41	0/1:17,0:17:18.25:18,0,132	0/1:20,0:20:21.90:154,0,22	1/1:25,0:20:31.35:362,31,0	0/1:32,6:38:33.29:339,0,33	1/1:10,0:10:13.17:118,13,0	0/1:19,4:23:74.69:170,0,75	0/1:30,4:32:63.96:76,0,64	0/1:18,1:19:28.59:54,0,29	0/1:22,5:27:93.07:120,0,93	1/1:28,0:28:55.71:796,56,0	1/1:31,0:31:39.01:448,39,0	1/1:6,0:6:9.02:145,9,0
chr10	25434668	.	T	TGATA	12335.26	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=4.925;DP=648;FS=3.853;HRun=0;HaplotypeScore=181.6984;InbreedingCoeff=0.8455;MQ=54.01;MQ0=7;MQRankSum=-2.008;QD=21.91;ReadPosRankSum=1.606;VQSLOD=4.3173;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:21.05:0,21,225	1/1:3,10:13:15.05:322,15,0	0/0:10,0:8:24.08:0,24,396	0/0:9,0:8:21.06:0,21,299	1/1:11,18:32:37.01:833,37,0	1/1:4,22:33:17.89:373,18,0	1/1:6,7:15:8.96:157,9,0	1/1:15,0:28:59.99:1044,60,0	1/1:3,11:18:10.65:172,11,0	1/1:3,23:30:69.64:1560,70,0	1/1:3,20:33:32.51:759,33,0	1/1:3,9:18:6.02:139,6,0	1/1:9,12:27:23.95:458,24,0	1/1:6,22:32:14.59:231,15,0	0/0:24,0:27:33.01:0,33,847	1/1:6,14:23:9.03:215,9,0	0/0:13,0:15:18.05:0,18,279	1/1:10,1:19:33.79:482,34,0	1/1:6,15:19:48.07:947,48,0	1/1:8,25:37:51.18:1197,51,0	1/1:7,0:12:8.99:229,9,0	1/1:6,11:19:18.43:416,18,0	1/1:6,23:32:17.94:420,18,0	1/1:4,10:18:6.02:143,6,0	1/1:8,14:25:9.92:208,10,0	1/1:7,20:30:72.07:1437,72,0	1/1:10,24:36:24.03:516,24,0	1/1:3,6:9:3.01:77,3,0
chr10	25434675	.	TAGAC	T	187.05	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-0.105;DP=640;FS=1.210;HRun=0;HaplotypeScore=201.9769;InbreedingCoeff=0.6639;MQ=59.15;MQ0=6;MQRankSum=-2.141;QD=8.13;ReadPosRankSum=-0.267;VQSLOD=2.6541;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,17:22:17.97:277,18,0	0/0:14,0:14:23.10:0,23,353	0/0:14,0:12:36.03:0,36,677	0/0:14,0:13:27.72:0,28,628	0/0:29,0:29:37.95:0,38,341	0/0:30,0:30:4.59:0,5,243	0/0:12,0:12:11.95:0,12,160	0/0:31,0:30:73.84:0,74,781	0/0:16,0:16:14.23:0,14,106	0/0:27,0:27:73.29:0,73,1112	0/0:34,0:34:42.56:0,43,502	0/0:15,0:16:9.02:0,9,110	0/0:24,0:26:21.03:0,21,320	0/0:31,0:31:17.91:0,18,195	0/0:31,0:29:43.30:0,43,1407	0/0:22,0:22:15.05:0,15,279	0/0:15,0:15:24.03:0,24,501	0/0:20,0:20:17.43:0,17,293	0/0:21,0:19:45.12:0,45,630	0/0:34,0:36:57.01:0,57,691	0/0:12,0:12:12:0,12,217	0/0:18,0:18:29.10:0,29,383	0/0:31,0:30:23.47:0,23,364	0/0:18,0:18:10.88:0,11,129	0/0:23,0:23:17.88:0,18,258	0/0:32,0:32:88.19:0,88,1193	0/0:35,0:35:39.04:0,39,611	0/0:8,0:8:6.02:0,6,123
chr10	25434877	.	C	CT	12280.77	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-10.869;DP=557;FS=10.888;HRun=7;HaplotypeScore=49.6863;InbreedingCoeff=0.9386;MQ=65.87;MQ0=0;MQRankSum=-2.872;QD=29.10;ReadPosRankSum=3.462;VQSLOD=4.7948;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:23:59.13:0,59,556	1/1:1,3:4:3.01:36,3,0	0/0:17,0:15:33.91:0,34,286	0/0:15,0:12:25.88:0,26,217	1/1:1,35:37:98.40:1212,98,0	1/1:1,19:20:48.15:580,48,0	1/1:3,5:8:12.04:145,12,0	0/0:34,0:34:93.12:0,93,886	1/1:2,14:16:33.10:399,33,0	1/1:1,25:27:75.20:874,75,0	1/1:1,34:35:96.29:1153,96,0	1/1:2,10:12:27.08:326,27,0	1/1:1,14:16:42.13:507,42,0	1/1:6,12:18:43.66:488,44,0	0/0:24,0:24:57.09:0,57,551	1/1:1,15:16:33.10:399,33,0	0/0:22,0:22:57.05:0,57,537	1/1:4,14:18:33.10:399,33,0	1/1:4,15:19:45.11:520,45,0	1/1:2,28:30:78.24:940,78,0	1/1:0,4:4:9.03:109,9,0	1/1:1,14:15:36.07:414,36,0	1/1:3,14:17:36.11:435,36,0	1/1:1,7:8:15.05:181,15,0	1/1:1,33:34:81.25:978,81,0	1/1:2,34:36:99:1207,102,0	1/1:0,25:25:69.21:833,69,0	1/1:2,5:7:12.04:145,12,0
chr10	25436017	.	GTGA	G	466.29	PASS	AB=1.000;AC=6;AF=0.107;AN=56;BaseQRankSum=0.412;DP=652;FS=0.909;HRun=0;HaplotypeScore=165.1070;InbreedingCoeff=0.2610;MQ=61.07;MQ0=4;MQRankSum=1.789;QD=3.59;ReadPosRankSum=-0.142;VQSLOD=2.7904;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:23,6:29:41.92:525,42,0	0/0:8,0:8:9.01:0,9,111	0/0:22,0:17:11.87:0,12,168	0/0:26,0:24:16.90:0,17,256	0/1:28,0:28:2.04:2,0,436	0/1:23,0:22:10.37:10,0,370	0/0:19,0:19:15.05:0,15,294	0/0:27,0:24:36.11:0,36,548	0/0:21,0:21:29.96:0,30,378	0/0:29,0:29:60.19:0,60,1070	0/0:21,0:21:33.06:0,33,520	0/1:22,0:22:12.59:13,0,319	0/0:26,0:26:27.90:0,28,378	0/0:20,0:20:21.06:0,21,370	0/0:26,0:26:27.08:0,27,488	0/0:23,0:23:33.10:0,33,603	0/0:22,0:22:33.10:0,33,579	0/0:10,0:10:21.54:0,22,382	0/0:20,0:18:33.10:0,33,536	0/0:30,1:31:12.76:0,13,666	0/0:29,0:29:39.13:0,39,737	0/0:34,0:34:51.11:0,51,841	0/0:25,0:25:33.06:0,33,537	0/0:19,0:19:18.02:0,18,244	0/0:29,0:28:48.14:0,48,816	0/1:28,0:28:37.45:37,0,625	0/0:28,0:28:42.06:0,42,609	0/0:7,0:7:9.03:0,9,141
chr10	25436049	.	AGTGGTGGTGGTGGTGGTG	A	12695.29	PASS	AC=42;AF=0.808;AN=52;BaseQRankSum=3.275;DP=571;FS=16.987;HRun=0;HaplotypeScore=234.5797;InbreedingCoeff=0.6940;MQ=43.75;MQ0=34;MQRankSum=-4.059;QD=27.84;ReadPosRankSum=3.444;VQSLOD=2.4733;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:23.63:0,24,1086	1/1:1,5:6:8.99:313,9,0	./.	0/0:19,0:7:0.47:0,0,1	1/1:7,22:28:24.08:969,24,0	1/1:11,11:20:12.04:586,12,0	./.	0/0:13,0:12:17.99:0,18,320	1/1:8,10:16:15.05:734,15,0	1/1:16,14:30:30.06:1023,30,0	1/1:10,11:21:11.01:513,11,0	1/1:7,13:20:15.05:620,15,0	1/1:5,17:22:33.07:1259,33,0	1/1:7,16:23:5.98:167,6,0	0/0:9,0:18:3.01:0,3,115	1/1:10,12:22:3.01:147,3,0	0/0:13,0:12:20.94:0,21,836	1/1:6,3:9:6.02:293,6,0	1/1:21,7:21:21.05:792,21,0	1/1:10,18:28:24.08:1174,24,0	1/1:21,0:16:6:75,6,0	1/1:15,19:33:12.04:587,12,0	1/1:12,19:30:9.03:440,9,0	1/1:6,12:18:6.02:293,6,0	1/1:15,10:24:6.02:293,6,0	1/1:12,6:17:15.03:611,15,0	1/1:8,14:22:24.08:1173,24,0	1/1:1,8:9:15.05:633,15,0
chr10	25438245	.	TAA	T	10259.85	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-1.004;DP=493;FS=6.918;HRun=11;HaplotypeScore=68.0988;InbreedingCoeff=0.9196;MQ=67.31;MQ0=2;MQRankSum=-1.375;QD=24.55;ReadPosRankSum=2.088;VQSLOD=4.5164;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:2,0:22:44.79:0,45,154	1/1:4,7:11:18.03:192,18,0	0/0:15,0:13:22.01:0,22,315	0/0:5,0:5:5.88:0,6,82	1/1:2,34:35:99:1025,99,0	1/1:1,22:23:60.15:639,60,0	1/1:2,10:12:2.27:288,2,0	1/1:7,0:29:49.60:222,50,0	1/1:0,16:16:42.11:447,42,0	1/1:5,21:26:60.13:632,60,0	1/1:4,17:21:48.08:511,48,0	1/1:1,12:13:24.06:255,24,0	1/1:0,18:18:51.13:543,51,0	1/1:2,16:18:36.09:383,36,0	0/0:17,0:18:50.66:0,51,744	1/1:3,15:18:39.03:470,39,0	0/0:15,0:15:42.14:0,42,643	1/1:1,6:7:15.03:159,15,0	1/1:3,15:18:45.09:470,45,0	1/1:1,22:22:54.11:575,54,0	1/1:3,7:10:18.04:192,18,0	1/1:1,8:9:21.05:224,21,0	1/1:2,17:19:48.10:511,48,0	1/1:0,9:9:18.05:192,18,0	1/1:0,15:15:45.11:479,45,0	1/1:3,27:30:81.20:862,81,0	1/1:1,16:17:42.09:447,42,0	1/1:2,18:20:51.09:543,51,0
chr10	25439436	.	GT	G	9558.72	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=13.660;DP=570;FS=0.000;HRun=3;HaplotypeScore=146.2639;InbreedingCoeff=0.8824;MQ=55.14;MQ0=1;MQRankSum=-8.111;QD=20.83;ReadPosRankSum=3.204;VQSLOD=4.3696;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,16:16:27.07:289,27,0	1/1:0,5:4:9.02:99,9,0	0/0:27,1:24:33.41:0,33,780	0/0:21,1:15:4.01:0,4,472	1/1:2,22:24:42.11:463,42,0	1/1:0,24:24:60.16:657,60,0	1/1:1,8:8:18.05:195,18,0	1/1:8,24:29:60.04:621,60,0	1/1:4,23:27:39.10:429,39,0	1/1:4,21:25:57.16:635,57,0	1/1:6,10:16:27.53:291,28,0	1/1:2,15:17:27.07:296,27,0	1/1:3,16:19:30.80:352,31,0	1/1:6,20:26:50.03:549,50,0	0/0:22,0:22:60.20:0,60,862	1/1:4,23:27:51.14:563,51,0	0/0:39,0:39:99:0,114,1616	1/1:2,5:7:12.03:132,12,0	1/1:0,12:11:30.08:332,30,0	1/1:6,19:25:50.10:563,50,0	1/1:4,2:6:3.01:32,3,0	1/1:5,19:24:34.82:425,35,0	1/1:1,22:22:39.09:421,39,0	1/1:0,10:9:18.05:198,18,0	1/1:4,18:21:52:546,52,0	1/1:3,11:14:33.06:352,33,0	1/1:3,24:27:51.13:555,51,0	1/1:3,18:21:48.74:566,49,0
chr10	25439605	.	T	TA	690.30	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-6.924;DP=674;FS=15.396;HRun=5;HaplotypeScore=56.2879;InbreedingCoeff=0.8083;MQ=53.51;MQ0=24;MQRankSum=-6.632;QD=31.38;ReadPosRankSum=-3.420;VQSLOD=1.3424;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:81.18:0,81,857	0/0:9,0:9:24.06:0,24,258	0/0:27,1:4:3:0,3,32	0/0:34,0:6:9.02:0,9,92	0/0:29,0:29:69.17:0,69,742	0/0:26,0:26:72.18:0,72,773	0/0:21,0:21:39.09:0,39,418	1/1:1,21:21:60.19:785,60,0	0/0:18,0:17:42.09:0,42,443	0/0:31,0:31:84.20:0,84,895	0/0:33,0:33:90.22:0,90,967	0/0:17,0:17:45.11:0,45,484	0/0:19,0:19:48.12:0,48,516	0/0:24,0:24:60.13:0,60,637	0/0:21,0:21:63.16:0,63,677	0/0:24,0:24:57.14:0,57,611	0/0:26,0:26:72.15:0,72,763	0/0:25,0:25:66.16:0,66,709	0/0:27,0:20:48.08:0,48,502	0/0:33,0:33:87.21:0,87,935	0/0:16,0:15:39.10:0,39,419	0/0:25,0:24:66.16:0,66,709	0/0:19,0:19:54.14:0,54,579	0/0:20,0:19:54.13:0,54,580	0/0:27,0:27:72.16:0,72,764	0/0:29,0:28:81.20:0,81,870	0/0:24,0:24:72.18:0,72,774	0/0:15,0:15:45.11:0,45,484
chr10	25442736	.	CT	C	8868.18	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=1.475;DP=441;FS=5.946;HRun=9;HaplotypeScore=66.8014;InbreedingCoeff=0.9447;MQ=73.89;MQ0=1;MQRankSum=-4.651;QD=22.23;ReadPosRankSum=3.120;VQSLOD=5.8418;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,8:8:24.01:220,24,0	1/1:0,6:6:15.01:137,15,0	0/0:11,0:10:21.06:0,21,242	0/0:9,0:10:30:0,30,309	1/1:8,32:40:90.02:824,90,0	1/1:4,16:20:48.02:439,48,0	1/1:2,12:14:36.02:330,36,0	1/1:7,28:35:78.02:714,78,0	1/1:3,11:14:30.01:275,30,0	1/1:1,15:16:42.01:384,42,0	1/1:5,22:27:63.03:576,63,0	1/1:0,4:4:12.01:110,12,0	1/1:3,13:16:33.02:302,33,0	1/1:0,8:8:21.01:192,21,0	0/0:7,0:7:12.04:0,12,139	1/1:3,4:7:5.99:55,6,0	0/0:14,0:14:33.10:0,33,381	1/1:3,11:14:33.01:302,33,0	1/1:4,8:12:21:192,21,0	1/1:3,22:25:66.03:604,66,0	1/1:0,14:14:36.02:330,36,0	1/1:0,9:9:24.01:220,24,0	1/1:1,19:20:50.98:467,51,0	1/1:1,8:9:24.01:220,24,0	1/1:3,19:22:54.02:494,54,0	1/1:2,21:23:63.03:577,63,0	1/1:1,20:21:54.03:494,54,0	1/1:0,15:15:45.02:412,45,0
chr10	25443926	.	T	TACAG	2529.59	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-7.387;DP=594;FS=0.000;HRun=0;HaplotypeScore=89.0627;InbreedingCoeff=0.9907;MQ=65.77;MQ0=1;MQRankSum=-3.849;QD=63.24;ReadPosRankSum=0.554;VQSLOD=5.4664;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,27:27:69.24:1846,69,0	0/0:6,0:6:18.03:0,18,307	0/0:26,0:26:72.20:0,72,1235	0/0:22,0:21:57.13:0,57,1019	0/0:21,0:21:60.21:0,60,1122	0/0:33,0:32:90.31:0,90,1698	0/0:22,0:22:66.18:0,66,1187	0/0:46,0:46:99:0,135,2439	0/0:25,0:24:75.23:0,75,1359	0/0:30,0:30:87.26:0,87,1609	0/0:23,0:23:66.21:0,66,1215	0/0:7,0:7:18.06:0,18,342	0/0:12,0:12:33.11:0,33,625	0/0:24,0:24:69.21:0,69,1246	0/0:19,0:18:51.15:0,51,904	0/0:22,0:22:66.21:0,66,1221	1/1:0,12:13:30.10:805,30,0	0/0:12,0:12:36.10:0,36,649	0/0:21,0:21:57.19:0,57,1045	0/0:33,0:33:93.32:0,93,1765	0/0:33,0:33:99:0,99,1801	0/0:13,0:13:39.12:0,39,708	0/0:18,0:18:48.15:0,48,878	0/0:10,0:10:30.09:0,30,535	0/0:19,0:19:54.19:0,54,1007	0/0:18,0:18:51.17:0,51,930	0/0:28,0:28:78.26:0,78,1434	0/0:11,0:11:30.10:0,30,568
chr10	25444134	.	C	CT	2799.62	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=3.549;DP=564;FS=3.028;HRun=0;HaplotypeScore=82.7130;InbreedingCoeff=0.9925;MQ=83.87;MQ0=0;MQRankSum=-3.100;QD=40.57;ReadPosRankSum=2.884;VQSLOD=4.4398;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,42:42:99:1771,111,0	0/0:7,0:7:21.07:0,21,293	0/0:18,0:18:20.89:0,21,631	0/0:20,0:20:55.40:0,55,691	0/0:8,0:8:21.07:0,21,293	0/0:19,0:19:57.18:0,57,779	0/0:16,0:16:48.12:0,48,639	0/0:24,0:24:66.18:0,66,892	0/0:16,0:16:48.15:0,48,653	0/0:26,0:26:74.98:0,75,999	0/0:21,0:21:60.15:0,60,814	0/0:21,0:21:60.08:0,60,773	0/0:21,0:21:63.08:0,63,811	0/0:22,0:22:63.21:0,63,878	0/0:20,0:20:60.19:0,60,820	0/0:13,0:13:39.13:0,39,532	1/1:0,27:27:72.25:1150,72,0	0/0:13,0:13:39.10:0,39,523	0/0:17,0:17:50.90:0,51,599	0/0:30,0:30:84.18:0,84,1111	0/0:15,0:15:42.08:0,42,547	0/0:16,0:16:48.16:0,48,669	0/0:21,0:21:56.99:0,57,705	0/0:34,0:34:99:0,102,1352	0/0:21,0:21:60.20:0,60,837	0/0:21,0:21:63.20:0,63,862	0/0:26,0:26:75.18:0,75,1021	0/0:9,0:9:24.08:0,24,333
chr10	25444543	.	CA	C	11777.55	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=3.179;DP=653;FS=0.000;HRun=10;HaplotypeScore=104.0157;InbreedingCoeff=0.9918;MQ=63.43;MQ0=2;MQRankSum=-0.138;QD=21.22;ReadPosRankSum=4.186;VQSLOD=4.7174;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,99,1078	1/1:1,7:8:18:156,18,0	0/0:15,0:10:23.73:0,24,212	0/0:17,0:9:15:0,15,138	1/1:3,21:24:32.77:509,33,0	1/1:4,21:25:53.97:469,54,0	1/1:3,18:21:47.99:417,48,0	1/1:5,22:27:65.98:573,66,0	1/1:1,21:22:59.99:521,60,0	1/1:3,27:30:80.92:693,81,0	1/1:1,23:24:62.97:547,63,0	1/1:7,17:24:27.13:416,27,0	1/1:0,25:25:68.99:599,69,0	1/1:5,25:30:65.97:573,66,0	1/1:2,26:28:68.98:599,69,0	1/1:1,18:19:50.99:443,51,0	0/0:7,0:27:51.45:0,51,279	1/1:1,24:25:71.98:625,72,0	1/1:3,15:18:44.97:384,45,0	1/1:2,30:32:80.83:693,81,0	1/1:3,21:24:56.98:495,57,0	1/1:4,22:26:35.49:470,35,0	1/1:6,18:24:47.97:417,48,0	1/1:0,14:14:41.99:365,42,0	1/1:0,16:16:41.99:365,42,0	1/1:7,20:27:29.80:488,30,0	1/1:3,29:32:83.98:729,84,0	1/1:0,9:9:26.99:234,27,0
chr10	25445204	.	TC	T	1706.92	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.731;DP=740;FS=5.631;HRun=1;HaplotypeScore=77.2120;InbreedingCoeff=0.9935;MQ=85.55;MQ0=0;MQRankSum=-2.602;QD=33.47;ReadPosRankSum=1.948;VQSLOD=3.4386;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,50:51:99:1802,129,0	0/0:7,0:7:21.07:0,21,336	0/0:34,0:33:89.74:0,90,1290	0/0:19,0:19:56.40:0,56,859	0/0:34,0:34:99:0,102,1607	0/0:23,0:23:66.22:0,66,1054	0/0:32,0:32:87.26:0,87,1316	0/0:17,0:17:51.17:0,51,815	0/0:39,0:39:99:0,114,1787	0/0:26,0:26:78.24:0,78,1204	0/0:17,0:17:51.17:0,51,815	0/0:34,0:34:96.31:0,96,1499	0/0:28,0:28:78.25:0,78,1215	0/0:38,0:38:99:0,114,1777	0/0:27,0:27:81.28:0,81,1295	0/0:25,0:25:75.25:0,75,1168	0/0:23,0:23:66.22:0,66,1042	0/0:10,0:10:30.10:0,30,474	0/0:31,0:31:90.28:0,90,1392	0/0:28,0:28:84.27:0,84,1312	0/0:42,0:42:99:0,120,1864	0/0:23,0:23:69.22:0,69,1059	0/0:26,0:26:78.27:0,78,1247	0/0:26,0:26:69.24:0,69,1102	0/0:20,0:20:60.20:0,60,951	0/0:25,0:25:75.23:0,75,1171	0/0:27,0:27:78.25:0,78,1219	0/0:8,0:8:24.08:0,24,384
chr10	25445349	.	T	TCAAGGTGGGAG	83298.13	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-9.011;DP=838;FS=0.891;HRun=0;HaplotypeScore=178.9834;InbreedingCoeff=0.9569;MQ=74.84;MQ0=0;MQRankSum=-14.150;QD=110.77;ReadPosRankSum=6.251;VQSLOD=5.0830;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,24:47:84.29:4632,84,0	1/1:0,5:8:15.05:862,15,0	0/0:31,0:31:90.31:0,90,2977	0/0:23,0:23:62.29:0,62,1831	1/1:7,21:47:87.06:4010,87,0	1/1:5,18:30:66.23:3658,66,0	1/1:8,16:36:69.24:3827,69,0	1/1:9,8:30:87.27:4213,87,0	1/1:6,20:34:72.25:4059,72,0	1/1:8,26:40:99:6009,114,0	1/1:4,12:19:48.16:2753,48,0	1/1:6,16:38:63.22:3247,63,0	1/1:9,17:37:81.28:4085,81,0	1/1:10,18:39:84.29:4601,84,0	0/0:32,0:32:96.32:0,96,3305	1/1:7,17:31:72.25:3963,72,0	1/1:8,7:17:39.13:1974,39,0	1/1:1,6:8:21.07:1192,21,0	1/1:9,6:26:72.15:2706,72,0	1/1:9,17:34:66.23:3612,66,0	1/1:9,7:25:36.12:2063,36,0	1/1:13,14:37:66.10:3257,66,0	1/1:4,15:29:51.16:2929,51,0	1/1:4,10:22:33.07:1662,33,0	1/1:9,23:42:78.15:4471,78,0	1/1:7,17:37:99:5062,108,0	1/1:4,22:36:72.25:4135,72,0	1/1:2,0:2:6.02:317,6,0
chr10	25446278	.	T	TCC	1772.55	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-7.954;DP=736;FS=0.000;HRun=3;HaplotypeScore=103.9011;InbreedingCoeff=0.9940;MQ=78.94;MQ0=1;MQRankSum=-3.140;QD=41.22;ReadPosRankSum=0.923;VQSLOD=3.0010;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,41:42:99:1867,102,0	0/0:12,0:12:36.12:0,36,503	0/0:19,0:19:48.14:0,48,614	0/0:20,0:20:24.63:0,25,485	0/0:34,0:34:99:0,102,1318	0/0:33,0:33:96.29:0,96,1307	0/0:18,0:18:51.17:0,51,713	0/0:34,0:34:93.27:0,93,1228	0/0:25,0:25:75.24:0,75,1030	0/0:26,0:26:78.12:0,78,1038	0/0:22,0:22:63.20:0,63,862	0/0:28,0:28:84.20:0,84,1073	0/0:28,0:28:81.24:0,81,1097	0/0:23,0:23:69.19:0,69,913	0/0:32,0:32:90.30:0,90,1258	0/0:25,0:25:75.24:0,75,1032	0/0:21,0:21:63.19:0,63,860	0/0:18,0:18:51.17:0,51,713	0/0:18,0:18:54.17:0,54,735	0/0:45,0:45:99:0,129,1715	0/0:23,0:23:63.18:0,63,844	0/0:32,0:32:90.26:0,90,1207	0/0:18,0:18:51.16:0,51,695	0/0:26,0:26:78.24:0,78,1071	0/0:29,0:29:87.25:0,87,1165	0/0:32,0:32:84.23:0,84,1113	0/0:42,0:42:99:0,120,1605	0/0:10,0:10:21.03:0,21,271
chr10	25447482	.	TGTGTGTGTGTGTGTG	T	1200.56	PASS	AB=1.000;AC=3;AF=0.079;AN=38;BaseQRankSum=-2.479;DP=170;FS=8.650;HRun=0;HaplotypeScore=67.5128;InbreedingCoeff=0.2700;MQ=37.47;MQ0=24;MQRankSum=-1.111;QD=31.59;ReadPosRankSum=-0.434;VQSLOD=0.7771;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:8:11.28:0,11,440	0/0:1,0:1:3.01:0,3,100	./.	0/0:25,0:3:8.39:0,8,151	0/0:7,0:6:6.02:0,6,123	./.	./.	1/1:11,22:31:14.12:1265,14,0	0/0:2,0:1:0:0,0,0	0/0:4,0:3:9.03:0,9,166	0/0:2,0:2:3.01:0,3,63	./.	0/0:1,0:1:3.01:0,3,57	0/0:2,0:2:3.01:0,3,36	0/0:4,0:4:9.03:0,9,626	0/0:2,0:2:6.02:0,6,198	0/0:16,0:14:13.40:0,13,486	0/0:7,0:5:9:0,9,150	0/0:2,0:1:0:0,0,0	0/0:3,0:3:6.02:0,6,174	./.	./.	./.	./.	./.	0/0:4,0:4:9.92:0,10,233	0/1:5,0:5:28.85:29,0,117	0/0:3,0:3:6.02:0,6,172
chr10	25447492	.	TGTGTG	T	1826.81	PASS	AB=1.000;AC=30;AF=0.789;AN=38;BaseQRankSum=-1.186;DP=176;FS=1.500;HRun=0;HaplotypeScore=39.8046;InbreedingCoeff=0.1923;MQ=37.00;MQ0=33;MQRankSum=-0.625;QD=19.03;ReadPosRankSum=-1.639;VQSLOD=2.3796;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:9,0:9:28.33:28,0,37	1/1:1,0:1:3:25,3,0	./.	0/0:29,0:3:1:0,1,75	1/1:5,0:4:6.02:124,6,0	0/0:2,5:7:0:0,0,0	./.	1/1:27,0:23:60.18:748,60,0	./.	1/1:1,4:4:12.04:223,12,0	1/1:2,0:2:3.01:62,3,0	./.	1/1:1,0:1:3.01:62,3,0	1/1:2,0:2:3.01:38,3,0	0/0:3,0:3:9.03:0,9,258	1/1:3,0:3:9:88,9,0	0/1:16,0:12:32.09:32,0,52	1/1:6,0:4:9.03:141,9,0	1/1:4,0:2:3.01:38,3,0	1/1:2,1:3:5.81:75,6,0	./.	./.	./.	./.	./.	1/1:4,0:4:11.83:127,12,0	1/1:5,1:5:8.39:85,8,0	1/1:2,0:2:5.94:44,6,0
chr10	25447494	.	TGTG	T	1925.84	PASS	AB=1.000;AC=35;AF=0.795;AN=44;BaseQRankSum=0.197;DP=182;FS=6.454;HRun=0;HaplotypeScore=35.5235;InbreedingCoeff=0.3077;MQ=38.22;MQ0=33;MQRankSum=0.365;QD=18.52;ReadPosRankSum=-1.752;VQSLOD=1.9113;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,0:10:9.85:112,10,0	1/1:2,0:2:6.02:88,6,0	0/0:29,0:1:3.01:0,3,30	0/0:29,0:3:0.98:0,1,73	1/1:1,4:4:6.02:75,6,0	0/0:7,0:7:0:0,0,0	./.	1/1:27,0:23:60.08:663,60,0	1/1:3,0:2:3.01:38,3,0	1/1:5,0:4:12.04:156,12,0	1/1:0,3:3:3.01:37,3,0	./.	1/1:1,0:1:3.01:38,3,0	1/1:2,0:2:3.01:38,3,0	0/0:3,0:3:9.03:0,9,188	1/1:3,0:3:9.03:137,9,0	0/1:16,0:12:10.79:73,0,11	1/1:6,0:4:9.03:114,9,0	1/1:3,0:1:3.01:38,3,0	1/1:3,0:3:6.02:75,6,0	1/1:2,0:1:3.01:38,3,0	./.	./.	./.	./.	1/1:4,0:4:11.98:133,12,0	1/1:6,0:5:9.01:100,9,0	1/1:3,0:3:6.02:88,6,0
chr10	25447496	.	TG	T	1748.24	PASS	AC=36;AF=0.857;AN=42;BaseQRankSum=0.548;DP=179;FS=3.859;HRun=2;HaplotypeScore=33.0740;InbreedingCoeff=0.4139;MQ=38.58;MQ0=32;MQRankSum=0.509;QD=17.31;ReadPosRankSum=0.020;VQSLOD=3.4012;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,7:9:13.26:190,13,0	1/1:0,2:2:6.01:66,6,0	0/0:29,0:1:3.01:0,3,30	0/0:29,0:3:4.42:0,4,73	1/1:5,0:4:5.81:32,6,0	./.	./.	1/1:25,0:22:57.85:581,58,0	1/1:3,0:2:3.01:38,3,0	1/1:5,0:4:11.83:94,12,0	1/1:3,0:3:2.90:16,3,0	./.	1/1:0,1:1:2.88:15,3,0	1/1:0,2:2:3.01:38,3,0	0/0:3,0:3:9.03:0,9,121	1/1:0,3:3:9:89,9,0	1/1:6,10:12:13.80:129,14,0	1/1:0,5:4:8.89:91,9,0	1/1:2,1:1:3.01:38,3,0	1/1:1,2:3:5.88:53,6,0	1/1:1,1:1:3.01:38,3,0	./.	./.	./.	./.	1/1:1,4:5:15.04:178,15,0	1/1:2,4:5:9.02:111,9,0	1/1:0,3:3:6.01:65,6,0
chr10	25447497	.	G	GT	1410.25	PASS	AB=1.000;AC=34;AF=0.773;AN=44;BaseQRankSum=-1.987;DP=179;FS=0.000;HRun=1;HaplotypeScore=34.3894;InbreedingCoeff=0.4409;MQ=39.18;MQ0=32;MQRankSum=2.731;QD=13.06;ReadPosRankSum=-1.660;VQSLOD=1.5258;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,1:9:12.55:120,13,0	1/1:2,0:2:6.01:66,6,0	0/0:29,0:1:3.01:0,3,31	0/0:29,0:3:5.99:0,6,76	0/1:5,0:4:0:0,0,0	0/1:8,0:8:0:0,0,0	./.	1/1:25,2:24:32.42:509,32,0	1/1:2,1:2:3.01:38,3,0	1/1:5,0:4:6.46:61,6,0	0/1:3,0:3:0:0,0,0	./.	0/1:1,0:1:0:0,0,0	1/1:2,0:2:3.01:38,3,0	0/0:3,0:3:8.90:0,9,60	1/1:3,0:3:6.12:47,6,0	1/1:10,3:9:13.98:131,14,0	1/1:5,0:4:6.02:76,6,0	1/1:3,0:1:3.01:38,3,0	1/1:3,0:3:3.01:38,3,0	1/1:2,0:1:3.01:38,3,0	./.	./.	./.	./.	1/1:5,0:5:14.93:155,15,0	1/1:5,1:5:9.03:122,9,0	1/1:3,0:3:5.05:44,5,0
chr10	25448381	.	C	CATG	2907.28	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-7.265;DP=617;FS=0.000;HRun=0;HaplotypeScore=98.9041;InbreedingCoeff=0.9967;MQ=74.98;MQ0=0;MQRankSum=-2.528;QD=54.85;ReadPosRankSum=-3.380;VQSLOD=4.4775;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,21:23:57.20:1313,57,0	0/0:12,0:12:30.10:0,30,503	0/0:13,0:13:36.10:0,36,567	0/0:9,0:9:21.07:0,21,326	0/0:29,0:29:84.27:0,84,1392	0/0:30,0:30:87.30:0,87,1463	0/0:13,0:13:39.13:0,39,665	1/1:3,25:29:84.24:1716,84,0	0/0:21,0:21:60.18:0,60,971	0/0:31,0:31:90.30:0,90,1505	0/0:22,0:22:66.21:0,66,1096	0/0:21,0:21:57.15:0,57,912	0/0:37,0:37:99:0,105,1754	0/0:22,0:22:66.23:0,66,1126	0/0:26,0:26:78.25:0,78,1291	0/0:21,0:21:63.22:0,63,1072	0/0:24,0:24:69.24:0,69,1176	0/0:11,0:11:30.10:0,30,511	0/0:19,0:19:57.19:0,57,931	0/0:29,0:29:87.30:0,87,1480	0/0:20,0:20:51.17:0,51,862	0/0:21,0:21:63.22:0,63,1074	0/0:30,0:30:84.29:0,84,1427	0/0:10,0:10:27.09:0,27,456	0/0:21,0:21:60.17:0,60,972	0/0:30,0:30:90.30:0,90,1496	0/0:30,0:30:90.27:0,90,1489	0/0:12,0:12:36.12:0,36,614
chr10	25448921	.	A	AGAT	1409.26	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-2.446;DP=667;FS=12.091;HRun=0;HaplotypeScore=93.3004;InbreedingCoeff=0.9986;MQ=80.98;MQ0=0;MQRankSum=-2.999;QD=48.60;ReadPosRankSum=-4.019;VQSLOD=3.7086;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:63.22:0,63,1025	0/0:9,0:9:27.09:0,27,441	0/0:20,0:21:46.67:0,47,671	0/0:16,0:16:39.10:0,39,583	0/0:29,0:29:81.25:0,81,1272	0/0:26,0:26:75.24:0,75,1189	0/0:16,0:16:45.14:0,45,709	1/1:3,24:29:72.22:1504,72,0	0/0:29,0:29:87.28:0,87,1389	0/0:29,0:29:84.28:0,84,1343	0/0:27,0:27:69.24:0,69,1122	0/0:24,0:24:66.21:0,66,1053	0/0:27,0:27:78.24:0,78,1224	0/0:22,0:22:60.20:0,60,965	0/0:28,0:28:81.28:0,81,1321	0/0:23,0:23:66.21:0,66,1045	0/0:25,0:25:69.24:0,69,1117	0/0:13,0:12:33.08:0,33,510	0/0:20,0:20:57.19:0,57,926	0/0:29,0:29:84.28:0,84,1347	0/0:24,0:24:72.23:0,72,1145	0/0:26,0:26:72.23:0,72,1147	0/0:25,0:25:75.26:0,75,1218	0/0:19,0:19:54.18:0,54,882	0/0:33,0:33:90.31:0,90,1469	0/0:29,0:29:81.27:0,81,1302	0/0:26,0:26:72.21:0,72,1103	0/0:19,0:19:51.16:0,51,778
chr10	25449671	.	A	AT	23299.61	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-0.867;DP=701;FS=0.000;HRun=1;HaplotypeScore=83.0674;InbreedingCoeff=0.9716;MQ=87.79;MQ0=0;MQRankSum=-6.753;QD=39.90;ReadPosRankSum=2.852;VQSLOD=5.4013;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:8:24.06:0,24,295	1/1:0,15:15:45.15:674,45,0	0/0:28,0:28:65.31:0,65,806	0/0:20,0:20:57.14:0,57,679	1/1:1,42:43:99:1725,117,0	1/1:1,29:30:81.27:1213,81,0	1/1:1,17:18:36.12:539,36,0	1/1:0,34:34:99:1488,102,0	1/1:0,17:17:33.11:494,33,0	1/1:1,29:30:87.25:1261,87,0	1/1:0,29:29:87.12:1213,87,0	1/1:0,23:23:57.19:854,57,0	1/1:0,35:35:96.28:1438,96,0	1/1:0,23:23:63.21:934,63,0	0/0:31,0:31:87.26:0,87,1102	1/1:1,25:25:75.25:1124,75,0	0/0:30,0:30:90.26:0,90,1150	1/1:1,8:9:5.19:337,5,0	1/1:2,23:25:69.21:995,69,0	1/1:0,36:36:99:1407,99,0	1/1:1,24:25:60.20:899,60,0	1/1:1,27:28:69.59:983,70,0	1/1:0,38:38:99:1617,108,0	1/1:0,18:18:51.17:764,51,0	1/1:1,19:20:48.16:719,48,0	1/1:0,29:29:87.28:1285,87,0	1/1:1,20:21:57.19:843,57,0	1/1:1,11:12:33.11:494,33,0
chr10	25451513	.	G	GAACACCCA	29503.16	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-5.279;DP=315;FS=13.638;HRun=0;HaplotypeScore=68.5766;InbreedingCoeff=0.8699;MQ=53.91;MQ0=4;MQRankSum=-8.453;QD=109.27;ReadPosRankSum=1.031;VQSLOD=5.2894;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,10:17:41.81:1658,42,0	1/1:0,5:7:15.05:692,15,0	0/0:9,0:6:9.44:0,9,218	0/0:16,0:11:21.43:0,21,559	1/1:4,12:17:39:1493,39,0	1/1:2,7:7:21.07:869,21,0	1/1:3,3:4:9.03:415,9,0	1/1:4,0:4:9.03:412,9,0	1/1:2,2:4:9.03:415,9,0	1/1:3,3:8:24.07:993,24,0	1/1:2,9:11:30.10:1376,30,0	1/1:2,10:13:33.11:1512,33,0	1/1:2,7:12:24.08:1104,24,0	1/1:1,7:8:24.08:1102,24,0	0/0:19,0:19:54.19:0,54,1559	1/1:6,10:17:48.16:2212,48,0	1/1:1,9:12:30.10:1384,30,0	1/1:1,5:6:18.06:781,18,0	1/1:4,4:11:33.06:997,33,0	1/1:3,8:13:30.10:1336,30,0	1/1:0,3:3:9.03:415,9,0	1/1:3,13:17:48.16:2186,48,0	1/1:3,9:13:33.11:1470,33,0	1/1:2,4:7:18.06:746,18,0	1/1:1,10:11:33.11:1519,33,0	1/1:6,9:17:51.15:2115,51,0	1/1:2,13:18:42.14:1888,42,0	1/1:2,1:3:9.03:414,9,0
chr10	25451638	.	T	TA	792.65	PASS	AB=0.907;AC=6;AF=0.107;AN=56;BaseQRankSum=-1.566;DP=518;FS=8.687;HRun=10;HaplotypeScore=58.1112;InbreedingCoeff=0.5458;MQ=72.95;MQ0=1;MQRankSum=-0.584;QD=9.44;ReadPosRankSum=-2.769;VQSLOD=1.1757;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:11,26:37:0.20:651,0,0	0/1:5,1:9:9.93:10,0,113	0/1:18,0:18:0.39:0,0,83	0/0:11,0:12:8.16:0,8,93	0/0:22,1:25:17.03:0,17,322	0/0:15,0:15:38.96:0,39,320	0/0:13,0:13:29.93:0,30,240	1/1:4,3:17:37.77:243,38,0	0/0:20,0:20:30.54:0,31,391	0/0:26,0:27:64.86:0,65,520	0/0:20,1:23:26.93:0,27,410	0/0:18,0:18:44.93:0,45,369	0/0:15,0:15:29.93:0,30,246	0/0:15,0:15:38.88:0,39,308	0/0:16,0:17:49.98:0,50,400	0/0:21,0:21:53.91:0,54,443	0/0:21,0:22:49.91:0,50,393	0/0:17,0:17:47.94:0,48,394	0/0:22,0:23:64.95:0,65,521	0/0:22,0:23:55.95:0,56,449	0/0:12,0:12:32.94:0,33,268	0/0:27,0:27:62.90:0,63,517	0/0:11,0:11:29.88:0,30,239	0/0:8,0:8:17.98:0,18,148	0/0:16,1:18:18:0,18,343	0/0:19,1:20:18.90:0,19,358	0/0:18,0:18:47.93:0,48,394	0/0:14,0:14:38.94:0,39,317
chr10	25452224	.	CAAAAA	C	7230.74	PASS	AB=0.643;AC=45;AF=0.804;AN=56;BaseQRankSum=1.325;DP=460;FS=21.821;HRun=18;HaplotypeScore=99.3153;InbreedingCoeff=0.7392;MQ=74.73;MQ0=1;MQRankSum=-4.373;QD=20.14;ReadPosRankSum=8.049;VQSLOD=0.5261;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,0:20:23.50:231,24,0	1/1:1,5:6:15.02:218,15,0	0/0:20,0:12:8.84:0,9,112	0/0:21,0:14:5.61:0,6,48	1/1:11,14:28:27.06:385,27,0	1/1:8,15:24:46.79:627,47,0	1/1:3,8:12:17.38:226,17,0	0/0:14,0:22:22.83:0,23,203	1/1:2,4:6:5.94:87,6,0	1/1:8,11:19:32.45:458,32,0	1/1:8,5:18:30.81:306,31,0	1/1:5,7:14:19.74:235,20,0	1/1:4,7:12:23.51:312,24,0	1/1:3,1:5:8.87:116,9,0	0/0:16,0:19:54.18:0,54,1157	1/1:5,5:10:8.73:130,9,0	0/0:10,0:18:17.44:0,17,129	1/1:3,7:11:14.93:218,15,0	1/1:9,5:15:19.62:251,20,0	1/1:9,18:29:52.83:731,53,0	1/1:2,1:3:2.95:43,3,0	1/1:8,9:17:3.21:283,3,0	0/1:8,8:18:6.13:181,0,6	1/1:1,4:7:15.02:188,15,0	1/1:5,21:28:53.76:755,54,0	1/1:7,7:15:20.68:271,21,0	1/1:5,16:23:38.11:516,38,0	1/1:5,10:18:20.49:462,20,0
chr10	25452388	.	TTTG	T	7033.51	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-0.933;DP=543;FS=4.881;HRun=0;HaplotypeScore=85.2707;InbreedingCoeff=0.7912;MQ=71.75;MQ0=3;MQRankSum=2.690;QD=17.11;ReadPosRankSum=1.301;VQSLOD=4.4162;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:32.77:0,33,306	1/1:1,7:8:18.06:241,18,0	0/0:19,0:17:3.01:0,3,55	0/0:25,0:23:2.99:0,3,23	1/1:8,19:28:47.92:560,48,0	1/1:7,8:16:24.04:302,24,0	1/1:4,13:17:26.98:319,27,0	1/1:29,1:30:15.02:160,15,0	1/1:5,9:14:24.08:322,24,0	1/1:8,9:17:24.06:293,24,0	1/1:12,11:24:15.06:273,15,0	1/1:2,8:10:21.07:281,21,0	1/1:4,7:12:17.98:202,18,0	1/1:8,7:15:18.06:241,18,0	0/0:23,0:23:2.29:0,2,615	1/1:5,6:11:9.03:121,9,0	0/0:13,0:34:57.17:0,57,744	1/1:7,11:17:5.80:300,6,0	1/1:18,5:22:15.05:201,15,0	1/1:12,10:22:30.06:383,30,0	1/1:7,5:12:9.03:121,9,0	1/1:5,11:16:26.96:320,27,0	1/1:7,5:13:18.03:222,18,0	1/1:9,11:20:27.09:359,27,0	1/1:12,15:26:39.13:522,39,0	1/1:7,17:24:54.08:666,54,0	1/1:7,10:17:20.89:260,21,0	1/1:6,9:17:32.97:365,33,0
chr10	25453227	.	ATATATGTATG	A	231.82	PASS	AB=0.949;AC=11;AF=0.250;AN=44;BaseQRankSum=5.612;DP=134;FS=8.654;HRun=0;HaplotypeScore=50.0820;InbreedingCoeff=0.0244;MQ=76.26;MQ0=2;MQRankSum=-4.076;QD=3.01;ReadPosRankSum=2.230;VQSLOD=0.1667;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:4,5:9:0.06:0,0,0	./.	0/0:4,0:3:3.01:0,3,46	0/1:15,0:10:3.46:3,0,27	0/0:3,0:3:6:0,6,72	0/1:12,0:12:55.26:55,0,264	./.	1/1:10,0:10:12.87:143,13,0	./.	0/0:4,0:4:12.04:0,12,204	0/0:2,0:2:3.01:0,3,50	./.	0/0:3,0:3:3.01:0,3,48	0/1:3,0:3:17.98:46,0,18	./.	0/0:3,0:3:6.02:0,6,98	1/1:14,0:14:4.95:42,5,0	0/0:6,0:6:12.04:0,12,173	0/1:5,0:5:22.03:22,0,67	0/0:2,0:2:3:0,3,28	0/0:1,0:1:3.01:0,3,51	0/0:1,0:1:3.01:0,3,32	0/0:5,0:5:9:0,9,97	0/1:3,0:3:28.96:29,0,59	0/1:6,0:6:17.05:17,0,156	./.	0/0:6,0:6:11.63:0,12,152	0/0:11,0:10:27.08:0,27,388
chr10	25453233	.	GTATGTATATATATATATATATATA	G	633.31	PASS	AB=1.000;AC=8;AF=0.182;AN=44;BaseQRankSum=5.278;DP=123;FS=21.577;HRun=0;HaplotypeScore=88.4565;InbreedingCoeff=0.0441;MQ=70.00;MQ0=2;MQRankSum=-1.751;QD=14.73;ReadPosRankSum=0.728;VQSLOD=0.2579;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:8.97:0,9,72	./.	0/0:4,0:3:2.99:0,3,23	0/0:12,0:7:5.84:0,6,37	0/0:2,0:2:2.99:0,3,24	0/1:12,0:12:99:212,0,120	./.	1/1:1,12:13:7.65:250,8,0	./.	0/0:4,0:4:9.49:0,9,94	0/0:2,0:2:3.01:0,3,48	./.	0/0:1,0:1:2.99:0,3,24	1/1:3,0:3:3.01:41,3,0	./.	0/0:2,0:2:5.99:0,6,49	0/0:14,0:14:26.97:0,27,499	0/0:4,0:4:11.95:0,12,144	0/1:5,0:5:29.08:110,0,29	0/0:1,0:1:3.01:0,3,32	0/0:1,0:1:3.01:0,3,69	0/0:2,0:2:3:0,3,25	0/0:3,0:3:3:0,3,25	0/1:3,0:3:17.98:77,0,18	0/1:7,0:7:60.99:61,0,111	./.	0/0:6,0:6:11.98:0,12,106	0/0:11,0:10:26.85:0,27,223
chr10	25453237	.	GTATATATATATATATATATATA	G	831.14	PASS	AB=0.857;AC=13;AF=0.542;AN=24;BaseQRankSum=0.113;DP=108;FS=3.512;HRun=0;HaplotypeScore=79.3664;InbreedingCoeff=0.3966;MQ=67.82;MQ0=3;MQRankSum=-2.152;QD=20.27;ReadPosRankSum=1.813;VQSLOD=1.4381;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	0/0:10,0:5:3.01:0,3,31	./.	1/1:6,6:12:6.02:349,6,0	./.	0/0:13,0:13:12.79:0,13,198	./.	1/1:3,0:4:7.22:78,7,0	./.	./.	./.	1/1:1,0:2:3.01:73,3,0	./.	./.	0/0:13,0:13:12.69:0,13,271	0/0:4,0:4:3.01:0,3,39	1/1:3,1:4:5.97:207,6,0	./.	0/0:1,0:1:2.68:0,3,11	./.	./.	1/1:1,0:3:3.01:113,3,0	0/1:5,0:6:26.02:100,0,26	./.	./.	1/1:10,0:9:3.94:16,4,0
chr10	25453384	.	CA	C	4707.70	PASS	AB=0.556;AC=45;AF=0.804;AN=56;BaseQRankSum=-2.305;DP=331;FS=39.717;HRun=10;HaplotypeScore=42.1042;InbreedingCoeff=0.8516;MQ=76.40;MQ0=6;MQRankSum=-0.909;QD=19.95;ReadPosRankSum=4.979;VQSLOD=2.9773;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:53.10:0,53,537	1/1:1,7:8:20.99:182,21,0	0/0:30,0:20:38.87:0,39,305	0/0:17,0:9:11.74:0,12,73	1/1:2,16:18:41.92:357,42,0	1/1:2,10:12:26.99:234,27,0	1/1:1,7:8:14.99:130,15,0	0/0:6,0:16:27.09:0,27,149	1/1:0,9:9:24:208,24,0	1/1:1,8:9:23.95:201,24,0	1/1:2,11:13:16.38:198,16,0	1/1:0,7:7:21:182,21,0	1/1:3,10:13:26.91:234,27,0	1/1:0,7:7:21:182,21,0	0/0:7,0:7:15.03:0,15,159	1/1:2,9:11:23.99:208,24,0	1/1:2,12:14:29.99:260,30,0	1/1:5,14:19:41.98:364,42,0	1/1:0,8:8:23.87:198,24,0	1/1:2,6:8:17.99:156,18,0	1/1:2,9:11:23.98:208,24,0	1/1:1,3:4:8.99:77,9,0	1/1:3,8:11:20.99:182,21,0	0/1:2,8:10:12.18:135,0,12	1/1:0,6:6:15:130,15,0	1/1:0,10:10:29.99:260,30,0	1/1:0,11:11:29.99:260,30,0	1/1:2,7:8:17.99:156,18,0
chr10	25453981	.	CTAAAA	C	3658.01	PASS	AC=36;AF=0.857;AN=42;BaseQRankSum=5.287;DP=383;FS=0.000;HRun=0;HaplotypeScore=70.9863;InbreedingCoeff=0.4756;MQ=82.99;MQ0=3;MQRankSum=2.028;QD=13.91;ReadPosRankSum=0.242;VQSLOD=2.3405;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:22:11.34:138,11,0	./.	./.	0/0:25,0:13:0:0,0,0	1/1:8,2:10:3.01:53,3,0	1/1:10,15:25:36.12:641,36,0	1/1:5,2:7:3.01:53,3,0	1/1:24,0:24:1.25:3,1,0	1/1:4,1:5:3.01:53,3,0	./.	1/1:13,6:19:9.03:160,9,0	./.	./.	./.	0/0:10,0:10:6.02:0,6,167	1/1:8,5:13:9.03:160,9,0	0/0:25,0:25:36.11:0,36,910	1/1:10,10:20:27.09:481,27,0	1/1:14,6:20:18.04:290,18,0	1/1:11,2:13:6.02:106,6,0	1/1:2,1:3:3.01:53,3,0	1/1:3,2:5:3.01:53,3,0	1/1:4,1:5:3.01:53,3,0	./.	1/1:11,4:15:12.04:214,12,0	1/1:11,7:18:21.06:342,21,0	1/1:14,6:20:15.05:267,15,0	1/1:5,14:19:30.10:535,30,0
chr10	25454736	.	TACAC	T	4425.37	PASS	AB=0.830;AC=43;AF=0.827;AN=52;BaseQRankSum=-2.688;DP=563;FS=2.610;HRun=0;HaplotypeScore=106.9641;InbreedingCoeff=0.5016;MQ=66.68;MQ0=9;MQRankSum=0.601;QD=10.06;ReadPosRankSum=1.087;VQSLOD=4.1536;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:32:11.03:0,11,130	1/1:1,1:2:2.97:20,3,0	./.	0/1:25,0:18:0:0,0,0	1/1:10,10:21:15.01:175,15,0	1/1:10,10:20:9.03:140,9,0	1/1:8,12:21:9.03:139,9,0	./.	0/0:9,0:14:8.23:0,8,37	1/1:12,9:23:27.07:362,27,0	1/1:6,6:11:6.02:93,6,0	1/1:11,4:15:15.67:196,16,0	1/1:9,10:19:6.02:93,6,0	1/1:7,4:11:9.50:128,10,0	0/0:12,0:21:6.91:0,7,107	1/1:8,19:27:21.54:327,22,0	0/1:14,6:20:6.98:196,0,7	0/1:16,7:25:1.02:529,0,1	1/1:15,6:21:12.04:183,12,0	1/1:12,11:23:11.87:186,12,0	1/1:17,5:22:18.06:279,18,0	1/1:11,6:19:25.53:324,26,0	1/1:9,10:19:6.02:93,6,0	1/1:18,13:31:15.05:232,15,0	1/1:3,9:14:18.03:235,18,0	1/1:11,7:18:15.05:217,15,0	1/1:6,12:19:15.52:233,16,0	1/1:4,5:8:3.01:46,3,0
chr10	25455740	.	TAGGG	T	1242.03	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.696;DP=773;FS=4.011;HRun=0;HaplotypeScore=117.1702;InbreedingCoeff=0.9992;MQ=57.04;MQ0=10;MQRankSum=0.525;QD=42.83;ReadPosRankSum=0.100;VQSLOD=4.0934;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,153,3940	0/0:12,0:12:36.12:0,36,952	0/0:28,0:12:36.04:0,36,874	0/0:22,0:13:30.10:0,30,751	0/0:28,0:26:81.28:0,81,2175	0/0:16,0:15:48.16:0,48,1284	0/0:17,0:17:48.16:0,48,1315	0/0:37,0:37:99:0,99,2521	0/0:30,0:30:87.28:0,87,2326	0/0:26,0:26:72.25:0,72,1936	0/0:17,0:17:51.16:0,51,1331	0/0:18,0:18:51.18:0,51,1396	0/0:36,0:36:99:0,105,2766	0/0:31,0:31:90.31:0,90,2453	0/0:40,0:40:99:0,114,3113	0/0:31,0:31:87.29:0,87,2328	1/1:1,28:29:69.24:1337,69,0	0/0:24,0:24:63.19:0,63,1665	0/0:16,0:15:45.15:0,45,1220	0/0:37,0:37:99:0,111,2972	0/0:32,0:32:93.32:0,93,2533	0/0:30,0:30:77.07:0,77,2058	0/0:21,0:21:63.22:0,63,1719	0/0:38,0:38:99:0,114,3086	0/0:28,0:28:84.28:0,84,2241	0/0:31,0:31:87.28:0,87,2241	0/0:30,0:30:90.31:0,90,2452	0/0:16,0:16:48.13:0,48,1196
chr10	25458438	.	CAT	C	1140.55	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.216;DP=668;FS=2.501;HRun=0;HaplotypeScore=78.2266;InbreedingCoeff=0.9838;MQ=82.58;MQ0=1;MQRankSum=-4.888;QD=39.33;ReadPosRankSum=2.200;VQSLOD=5.7520;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,28:29:84.28:1235,84,0	0/0:10,0:10:30.09:0,30,530	0/0:24,0:24:72.18:0,72,1250	0/0:25,0:25:75.21:0,75,1299	0/0:27,0:27:81.28:0,81,1508	0/0:37,0:37:99:0,105,1966	0/0:20,0:20:60.21:0,60,1123	0/0:38,0:38:99:0,111,2010	0/0:21,0:21:60.21:0,60,1100	0/0:25,0:25:75.25:0,75,1372	0/0:26,0:26:72.23:0,72,1309	0/0:17,0:17:51.16:0,51,923	0/0:24,0:24:72.23:0,72,1315	0/0:20,0:20:60.21:0,60,1115	0/0:37,0:37:99:0,108,1938	0/0:19,0:19:57.20:0,57,1052	0/0:27,0:27:81.28:0,81,1515	0/0:14,0:14:33.11:0,33,617	0/0:21,0:21:63.21:0,63,1129	0/0:30,0:30:87.28:0,87,1589	0/0:23,0:22:66.23:0,66,1225	0/0:24,0:24:72.25:0,72,1333	0/0:27,0:27:81.25:0,81,1453	0/0:21,0:21:63.22:0,63,1179	0/0:17,0:17:51.17:0,51,954	0/0:31,0:31:93.26:0,93,1586	0/0:28,0:28:84.29:0,84,1554	0/0:6,0:6:15.05:0,15,257
chr10	25459752	.	A	ACG	597.78	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.239;DP=639;FS=1.032;HRun=0;HaplotypeScore=81.3339;InbreedingCoeff=0.9914;MQ=92.76;MQ0=0;MQRankSum=-3.795;QD=45.98;ReadPosRankSum=-1.946;VQSLOD=4.4009;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,126,2023	0/0:7,0:7:18.06:0,18,293	0/0:28,0:28:84.29:0,84,1350	0/0:26,0:26:52.66:0,53,926	0/0:13,0:13:39.13:0,39,634	0/0:21,0:21:63.17:0,63,955	0/0:28,0:28:81.26:0,81,1295	1/1:0,12:13:39.10:693,39,0	0/0:31,0:31:90.29:0,90,1428	0/0:14,0:14:39.13:0,39,635	0/0:11,0:11:33.10:0,33,508	0/0:28,0:28:84.29:0,84,1370	0/0:28,0:28:84.27:0,84,1346	0/0:30,0:30:87.28:0,87,1389	0/0:35,0:35:99:0,105,1639	0/0:20,0:20:57.19:0,57,929	0/0:22,0:22:66.23:0,66,1077	0/0:20,0:20:57.19:0,57,930	0/0:20,0:20:54.18:0,54,878	0/0:16,0:16:48.15:0,48,754	0/0:36,0:36:99:0,105,1610	0/0:12,0:12:33.10:0,33,514	0/0:16,0:16:48.16:0,48,783	0/0:20,0:20:60.18:0,60,953	0/0:22,0:22:60.17:0,60,927	0/0:22,0:22:66.23:0,66,1077	0/0:43,0:43:99:0,129,2078	0/0:15,0:15:45.09:0,45,635
chr10	25460048	.	TGG	T	1332.91	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=2.302;DP=392;FS=0.000;HRun=10;HaplotypeScore=63.3701;InbreedingCoeff=0.6580;MQ=74.50;MQ0=1;MQRankSum=-0.764;QD=17.09;ReadPosRankSum=5.345;VQSLOD=1.6196;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,34:37:68.90:747,69,0	0/0:8,0:8:18.05:0,18,261	0/0:9,0:12:10.84:0,11,122	0/0:9,0:8:3.19:0,3,149	0/0:15,0:16:32.36:0,32,404	0/0:13,0:16:29.02:0,29,310	0/0:34,0:39:67.07:0,67,1276	0/1:11,0:11:10.55:11,0,11	0/0:7,0:7:21.04:0,21,268	0/0:8,0:8:12.03:0,12,171	0/0:11,0:12:23.55:0,24,318	0/0:12,0:15:37.30:0,37,360	0/0:5,0:5:14.96:0,15,163	0/0:13,0:13:27.09:0,27,424	0/0:12,0:12:24.07:0,24,355	0/0:13,0:13:27.54:0,28,372	1/1:3,26:29:63.11:702,63,0	0/0:22,0:20:56.50:0,57,773	0/0:10,0:10:12.03:0,12,168	0/0:3,0:4:6.02:0,6,95	0/0:12,0:12:16.24:0,16,170	0/0:10,0:11:17.55:0,18,245	0/0:7,0:7:12.03:0,12,167	0/0:16,0:16:36.08:0,36,484	0/0:17,0:18:26.57:0,27,367	0/0:9,0:9:21.04:0,21,301	0/0:9,0:9:11.52:0,12,130	0/0:10,0:10:26.94:0,27,241
chr10	25460056	.	GGGC	G	246.28	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=5.627;DP=377;FS=12.229;HRun=0;HaplotypeScore=72.5362;InbreedingCoeff=0.6321;MQ=72.40;MQ0=2;MQRankSum=-4.123;QD=8.80;ReadPosRankSum=-2.731;VQSLOD=1.1873;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:35:29.68:0,30,157	0/0:7,0:7:21.07:0,21,400	0/1:14,0:11:5.84:6,0,174	0/0:9,0:7:11.46:0,11,160	0/0:11,0:11:33.08:0,33,530	0/0:18,0:18:41.90:0,42,548	0/0:42,0:42:99:0,110,1824	1/1:6,8:14:29.62:340,30,0	0/0:8,0:8:21.07:0,21,421	0/0:8,0:8:15.93:0,16,276	0/0:11,0:11:24.05:0,24,411	0/0:15,0:15:30.27:0,30,494	0/0:6,0:6:18.04:0,18,284	0/0:13,0:13:27.05:0,27,512	0/0:8,0:8:24.08:0,24,464	0/0:11,0:11:24.17:0,24,457	0/0:27,0:27:48.78:0,49,165	0/0:21,0:19:60.09:0,60,1076	0/0:11,0:11:23.91:0,24,312	0/0:5,0:5:11.90:0,12,159	0/0:13,0:13:23.40:0,23,307	0/0:8,0:8:18.05:0,18,318	0/0:6,0:6:15.02:0,15,242	0/0:13,0:13:33.10:0,33,636	0/0:12,0:12:30.09:0,30,547	0/0:8,0:8:24.04:0,24,416	0/0:10,0:10:19.49:0,19,256	0/0:12,0:12:34.77:0,35,455
chr10	25460071	.	T	TGC	105.73	PASS	AC=4;AF=0.074;AN=54;BaseQRankSum=1.839;DP=358;FS=13.680;HRun=0;HaplotypeScore=66.2570;InbreedingCoeff=0.5863;MQ=72.87;MQ0=2;MQRankSum=-3.353;QD=5.03;ReadPosRankSum=-1.340;VQSLOD=0.5552;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:38:59.76:0,60,668	./.	1/1:9,0:4:0.47:1,0,0	0/0:15,0:11:0.94:0,1,4	0/0:8,0:8:15.03:0,15,170	0/0:17,0:17:45.07:0,45,495	0/0:45,0:46:84.05:0,84,980	1/1:7,5:12:12.04:191,12,0	0/0:7,0:7:9.01:0,9,109	0/0:6,0:6:9.03:0,9,109	0/0:7,0:7:15.05:0,15,182	0/0:13,0:13:12.04:0,12,145	0/0:8,0:8:18.04:0,18,206	0/0:9,0:9:12.04:0,12,145	0/0:8,0:8:15.02:0,15,159	0/0:8,0:8:9.02:0,9,109	0/0:26,0:26:42.11:0,42,494	0/0:21,0:19:45.14:0,45,544	0/0:9,0:9:9.03:0,9,109	0/0:6,0:7:14.70:0,15,145	0/0:16,0:16:27.05:0,27,313	0/0:9,0:9:18.05:0,18,207	0/0:3,0:3:9:0,9,86	0/0:12,0:12:24.06:0,24,278	0/0:6,0:6:6.02:0,6,73	0/0:11,0:11:27.05:0,27,288	0/0:9,0:9:15.02:0,15,158	0/0:12,0:12:33.10:0,33,397
chr10	25461418	.	A	AACC	543.62	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=-0.661;DP=422;FS=13.833;HRun=0;HaplotypeScore=61.7250;InbreedingCoeff=0.7732;MQ=60.43;MQ0=9;MQRankSum=-0.047;QD=6.80;ReadPosRankSum=-2.175;VQSLOD=0.4577;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,20:29:30.06:550,30,0	0/0:5,0:5:12.02:0,12,133	0/0:20,0:12:5.89:0,6,53	0/1:24,0:14:0:0,0,0	0/0:14,0:13:11.69:0,12,145	0/0:20,0:20:23.69:0,24,272	0/0:11,0:11:24.03:0,24,291	1/1:18,0:17:9.38:61,9,0	0/0:15,0:15:26.97:0,27,293	0/0:8,0:8:9.02:0,9,99	0/0:17,0:17:21.01:0,21,221	0/0:24,0:24:45.11:0,45,567	0/0:11,0:11:24.05:0,24,294	0/0:23,0:23:45.06:0,45,554	0/0:20,0:20:36.06:0,36,426	0/0:22,0:22:51.03:0,51,607	1/1:9,0:9:5.97:60,6,0	0/0:9,0:9:17.94:0,18,184	0/0:11,0:11:7.74:0,8,94	0/0:11,0:11:24.01:0,24,258	0/0:22,0:22:29.90:0,30,263	0/0:9,0:8:18.02:0,18,197	0/0:9,0:10:18.01:0,18,209	0/0:12,0:11:24.06:0,24,310	0/0:15,0:15:33.06:0,33,386	0/0:11,0:10:12.02:0,12,135	0/0:15,0:15:24.04:0,24,278	0/0:6,0:6:9:0,9,90
chr10	25461646	.	AAT	A	1008.37	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.424;DP=574;FS=7.337;HRun=0;HaplotypeScore=71.4675;InbreedingCoeff=0.9972;MQ=76.76;MQ0=0;MQRankSum=2.687;QD=27.25;ReadPosRankSum=-3.737;VQSLOD=3.5599;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:84.29:0,84,1456	0/0:9,0:9:27.09:0,27,473	0/0:17,0:18:33.19:0,33,577	0/0:12,0:12:29.89:0,30,446	0/0:28,0:28:72.24:0,72,1232	0/0:30,0:30:84.28:0,84,1410	0/0:16,0:16:42.11:0,42,636	1/1:9,28:37:84.25:1103,84,0	0/0:14,0:14:33.11:0,33,578	0/0:22,0:22:62.24:0,62,1028	0/0:20,0:20:54.18:0,54,928	0/0:14,0:14:39.13:0,39,651	0/0:24,0:24:69.24:0,69,1200	0/0:20,0:20:54.18:0,54,938	0/0:14,0:14:36.11:0,36,588	0/0:21,0:21:60.20:0,60,995	0/0:37,0:37:99:0,102,1708	0/0:15,0:15:39.13:0,39,658	0/0:24,0:24:63.22:0,63,1088	0/0:16,0:16:45.15:0,45,776	0/0:26,0:26:69.24:0,69,1183	0/0:17,0:17:42.13:0,42,695	0/0:23,0:23:60.21:0,60,1022	0/0:12,0:12:33.11:0,33,565	0/0:15,0:15:42.14:0,42,728	0/0:17,0:17:36.12:0,36,626	0/0:27,0:27:81.26:0,81,1352	0/0:16,0:16:48.16:0,48,784
chr10	25463108	.	T	TA	412.49	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-4.984;DP=486;FS=0.000;HRun=7;HaplotypeScore=52.2558;InbreedingCoeff=0.8258;MQ=81.10;MQ0=0;MQRankSum=-2.287;QD=17.93;ReadPosRankSum=3.166;VQSLOD=3.2192;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,18:23:42.13:507,42,0	0/0:3,0:3:9.01:0,9,87	0/0:23,0:18:35.13:0,35,279	0/0:22,0:16:31.33:0,31,241	0/0:33,0:33:84.12:0,84,809	0/0:11,0:11:30.04:0,30,284	0/0:10,0:10:30.05:0,30,290	0/0:26,0:26:75.09:0,75,711	0/0:5,0:5:15.02:0,15,145	0/0:19,0:19:57.09:0,57,550	0/0:18,0:18:51.07:0,51,491	0/0:16,0:16:45.07:0,45,434	0/0:20,0:20:51.04:0,51,492	0/0:8,0:8:21.03:0,21,203	0/0:12,0:12:27.04:0,27,261	0/0:15,0:15:39.06:0,39,376	0/0:19,0:19:48.07:0,48,463	0/0:10,0:10:5.17:0,5,201	0/0:33,0:33:78.03:0,78,732	0/0:22,0:22:57.09:0,57,550	0/0:7,0:7:21.03:0,21,203	0/0:9,0:9:24.04:0,24,232	0/0:15,0:15:42.06:0,42,405	0/0:16,0:16:42.02:0,42,396	0/0:25,0:25:69.11:0,69,666	0/0:20,0:20:54.07:0,54,514	0/0:29,0:29:75.08:0,75,712	0/0:17,0:17:39.06:0,39,376
chr10	25463333	.	TGCC	T	1600.49	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.587;DP=645;FS=11.735;HRun=0;HaplotypeScore=91.4140;InbreedingCoeff=0.9909;MQ=87.16;MQ0=0;MQRankSum=-5.187;QD=42.12;ReadPosRankSum=3.066;VQSLOD=4.5045;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,38:38:93.28:1695,93,0	0/0:6,0:6:18.06:0,18,444	0/0:20,0:20:60.21:0,60,1455	0/0:24,0:24:69.19:0,69,1493	0/0:32,0:32:96.33:0,96,2264	0/0:15,0:15:45.15:0,45,1100	0/0:26,0:26:78.24:0,78,1797	0/0:39,0:39:99:0,114,2759	0/0:9,0:9:27.09:0,27,658	0/0:26,0:26:78.27:0,78,1905	0/0:25,0:25:72.23:0,72,1724	0/0:27,0:27:81.28:0,81,1944	0/0:27,0:27:81.28:0,81,1971	0/0:22,0:22:66.21:0,66,1578	0/0:29,0:29:87.28:0,87,2071	0/0:26,0:26:78.25:0,78,1843	0/0:25,0:25:75.26:0,75,1848	0/0:12,0:12:36.08:0,36,802	0/0:18,0:18:54.18:0,54,1256	0/0:24,0:24:69.24:0,69,1674	0/0:30,0:30:90.31:0,90,2190	0/0:14,0:14:42.13:0,42,985	0/0:16,0:16:48.16:0,48,1125	0/0:23,0:23:69.24:0,69,1642	0/0:24,0:24:72.25:0,72,1747	0/0:28,0:28:84.28:0,84,2022	0/0:25,0:24:75.26:0,75,1789	0/0:15,0:15:45.14:0,45,1031
chr10	25463661	.	G	GA	446.28	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-4.821;DP=521;FS=7.632;HRun=9;HaplotypeScore=51.4869;InbreedingCoeff=0.9262;MQ=70.22;MQ0=1;MQRankSum=-0.498;QD=23.49;ReadPosRankSum=0.234;VQSLOD=4.2518;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,16:19:50.73:541,51,0	0/0:8,0:8:17.99:0,18,156	0/0:17,0:15:12.41:0,12,239	0/0:6,0:6:11.74:0,12,98	0/0:35,0:35:71.51:0,72,782	0/0:20,0:20:56.98:0,57,495	0/0:14,0:14:38.99:0,39,339	0/0:34,0:34:83.97:0,84,729	0/0:16,0:16:44.97:0,45,387	0/0:20,0:20:56.99:0,57,494	0/0:23,0:23:65.86:0,66,561	0/0:21,0:21:59.98:0,60,521	0/0:16,0:16:38.94:0,39,331	0/0:10,0:10:29.99:0,30,260	0/0:22,0:22:59.98:0,60,521	0/0:17,0:17:44.96:0,45,387	0/0:20,0:20:50.98:0,51,443	0/0:11,0:11:17.96:0,18,151	0/0:20,0:20:44.97:0,45,386	0/0:27,1:28:42.26:0,42,592	0/0:11,0:11:26.99:0,27,234	0/0:11,0:11:32.97:0,33,281	0/0:15,0:15:38.99:0,39,339	0/0:13,0:13:35.99:0,36,312	0/0:19,0:19:47.98:0,48,415	0/0:19,0:19:53.99:0,54,469	0/0:38,0:38:92.94:0,93,807	0/0:18,0:18:47.98:0,48,417
chr10	25465157	.	G	GGAGAT	3389.52	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.694;DP=571;FS=10.595;HRun=0;HaplotypeScore=110.2151;InbreedingCoeff=0.9982;MQ=78.76;MQ0=0;MQRankSum=-9.617;QD=82.67;ReadPosRankSum=-1.535;VQSLOD=5.1824;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:54.19:0,54,1258	0/0:9,0:9:27.09:0,27,626	0/0:19,0:18:51:0,51,1103	0/0:18,0:18:51.17:0,51,1099	0/0:33,0:33:96.32:0,96,2186	0/0:26,0:26:78.27:0,78,1817	0/0:22,0:22:66.20:0,66,1486	1/1:11,12:24:69.24:2161,69,0	0/0:11,0:11:33.10:0,33,718	0/0:19,0:19:57.19:0,57,1274	0/0:21,0:21:63.21:0,63,1423	0/0:19,0:19:57.17:0,57,1277	0/0:25,0:25:72.25:0,72,1644	0/0:16,0:16:48.16:0,48,1112	0/0:29,0:29:81.28:0,81,1861	0/0:22,0:22:66.23:0,66,1532	1/1:7,10:17:42.11:1228,42,0	0/0:8,0:8:24.08:0,24,533	0/0:19,0:18:51.17:0,51,1142	0/0:30,0:30:90.30:0,90,2021	0/0:19,0:19:57.18:0,57,1254	0/0:21,0:21:63.22:0,63,1467	0/0:18,0:18:51.18:0,51,1188	0/0:17,0:17:51.13:0,51,1117	0/0:25,0:25:75.26:0,75,1702	0/0:21,0:21:63.20:0,63,1357	0/0:31,0:31:90.31:0,90,2017	0/0:13,0:13:39.12:0,39,858
chr10	25465174	.	A	AT	1140.03	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-2.512;DP=537;FS=12.651;HRun=7;HaplotypeScore=59.5127;InbreedingCoeff=0.9939;MQ=72.30;MQ0=0;MQRankSum=-5.565;QD=23.27;ReadPosRankSum=-3.360;VQSLOD=1.6284;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:51.02:0,51,481	0/0:11,0:11:33.05:0,33,319	0/0:25,0:24:42.15:0,42,472	0/0:10,0:10:23.79:0,24,213	0/0:35,0:35:96.10:0,96,907	0/0:23,0:23:69.11:0,69,666	0/0:18,0:18:51.08:0,51,492	1/1:9,19:28:57.17:687,57,0	0/0:15,0:15:45.07:0,45,434	0/0:15,0:15:39.05:0,39,373	0/0:21,0:21:63.10:0,63,608	0/0:17,0:17:47.55:0,48,437	0/0:19,0:19:51.08:0,51,492	0/0:18,0:18:51.08:0,51,492	0/0:27,0:27:81.13:0,81,782	0/0:19,0:19:51.07:0,51,487	1/1:4,17:21:48.15:575,48,0	0/0:9,0:9:27.04:0,27,260	0/0:18,0:17:48:0,48,445	0/0:22,0:22:54.08:0,54,520	0/0:16,0:16:42.07:0,42,406	0/0:14,0:14:42.07:0,42,405	0/0:19,0:19:54.07:0,54,515	0/0:17,0:17:48.08:0,48,463	0/0:22,0:22:57.09:0,57,550	0/0:19,0:19:48.07:0,48,463	0/0:31,0:31:87.13:0,87,838	0/0:9,0:9:18.03:0,18,174
chr10	25466057	.	TGATA	T	1219.34	PASS	AB=1.000;AC=21;AF=0.404;AN=52;BaseQRankSum=1.645;DP=582;FS=0.683;HRun=0;HaplotypeScore=196.5764;InbreedingCoeff=-0.2910;MQ=54.93;MQ0=4;MQRankSum=4.286;QD=3.03;ReadPosRankSum=4.409;VQSLOD=2.2593;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:21:14.92:0,15,140	0/0:13,0:13:4.89:0,5,89	./.	./.	0/1:31,0:33:10.05:10,0,62	1/1:20,0:20:7.74:58,8,0	0/0:12,0:13:3.01:0,3,46	0/0:35,0:33:11.43:0,11,119	0/1:21,0:21:9.83:10,0,150	0/1:25,0:25:99:162,0,293	0/1:29,0:29:99:140,0,152	0/1:20,0:20:22.26:22,0,59	0/0:15,0:15:0.47:0,0,1	0/1:26,0:25:10.12:10,0,60	1/1:12,11:23:30.10:469,30,0	0/0:14,0:14:0.65:0,1,42	0/0:21,0:20:27.01:0,27,448	0/1:23,0:23:8.87:9,0,61	0/1:10,0:9:31.93:32,0,38	0/1:33,0:33:99:117,0,125	0/1:12,0:12:13.11:13,0,39	0/1:23,0:23:21.94:22,0,120	0/0:26,0:26:4.15:0,4,40	1/1:9,0:11:11.70:73,12,0	0/1:27,0:28:31.04:61,0,31	0/1:23,0:24:60.97:61,0,132	0/1:20,0:19:52.46:62,0,52	0/1:12,0:10:41.23:41,0,67
chr10	25466060	.	TA	T	801.44	PASS	AB=0.578;AC=1;AF=0.018;AN=56;BaseQRankSum=1.557;DP=587;FS=13.064;HRun=1;HaplotypeScore=182.9249;InbreedingCoeff=-0.0205;MQ=54.58;MQ0=5;MQRankSum=-3.898;QD=21.66;ReadPosRankSum=-1.599;VQSLOD=1.6912;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:40.27:0,40,452	0/0:14,0:14:29.61:0,30,442	0/0:12,0:9:24.06:0,24,330	0/0:8,0:7:21.07:0,21,304	0/0:30,0:30:32.66:0,33,448	0/0:18,0:17:14.30:0,14,171	0/0:17,0:16:18.05:0,18,246	0/1:10,27:34:91.91:876,0,92	0/0:22,0:22:35.85:0,36,475	0/0:26,1:25:66.80:0,67,844	0/0:27,1:28:44.40:0,44,526	0/0:20,0:20:29.81:0,30,394	0/0:16,0:15:27.07:0,27,354	0/0:26,0:24:44.88:0,45,641	0/0:21,0:21:21.53:0,22,417	0/0:14,0:14:27.09:0,27,392	0/0:21,0:20:43.16:0,43,721	0/0:25,0:24:60.07:0,60,791	0/0:9,1:9:21.01:0,21,260	0/0:35,0:34:68.52:0,69,846	0/0:12,0:11:15.04:0,15,201	0/0:24,0:23:44.71:0,45,626	0/0:25,0:25:47.57:0,48,698	0/0:13,0:12:21.50:0,22,241	0/0:27,0:27:48.11:0,48,623	0/0:26,0:26:78.11:0,78,1015	0/0:22,0:20:48.08:0,48,622	0/0:12,0:10:30.06:0,30,363
chr10	25466084	.	TA	T	2899.24	PASS	AB=0.830;AC=19;AF=0.339;AN=56;BaseQRankSum=-5.036;DP=626;FS=0.000;HRun=1;HaplotypeScore=211.2300;InbreedingCoeff=-0.5319;MQ=46.52;MQ0=10;MQRankSum=4.632;QD=6.33;ReadPosRankSum=-2.458;VQSLOD=-0.6584;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:33.05:0,33,386	0/1:6,4:10:32.22:32,0,169	0/0:6,0:3:6.02:0,6,83	0/0:3,0:3:6.02:0,6,86	0/1:23,9:32:99:252,0,261	0/1:12,8:19:25.13:25,0,159	0/1:12,6:17:99:147,0,118	0/0:38,0:31:84.01:0,84,1026	0/1:13,8:20:99:193,0,221	0/1:38,0:36:99:443,0,668	0/1:40,0:40:50.50:50,0,200	0/1:14,9:23:54.46:54,0,136	0/1:6,10:15:88.47:185,0,88	0/1:16,9:23:99:129,0,357	0/0:22,0:22:44.60:0,45,481	0/1:22,0:22:12.63:13,0,211	0/0:16,0:15:35.59:0,36,506	0/0:19,0:18:21.62:0,22,445	0/1:17,0:14:99:209,0,234	0/1:25,17:41:99:413,0,588	0/1:14,0:13:9.04:9,0,107	0/0:19,7:25:6.27:0,6,306	0/1:16,8:24:87.48:87,0,419	0/0:10,2:11:18.04:0,18,206	0/1:21,4:25:99:121,0,371	0/1:24,0:24:99:349,0,356	0/1:26,0:26:23.85:24,0,337	0/1:12,9:19:99:320,0,319
chr10	25466085	.	A	AGAT	5100.59	PASS	AB=0.877;AC=25;AF=0.446;AN=56;BaseQRankSum=1.445;DP=629;FS=0.436;HRun=0;HaplotypeScore=224.0218;InbreedingCoeff=-0.5543;MQ=46.64;MQ0=10;MQRankSum=3.363;QD=9.36;ReadPosRankSum=4.288;VQSLOD=4.3306;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:26:58.45:58,0,184	0/1:9,0:10:73.54:74,0,166	0/0:7,0:3:6.02:0,6,85	0/0:3,0:3:3.01:0,3,41	0/1:32,0:32:99:278,0,127	1/1:20,0:19:8.82:104,9,0	0/1:18,0:18:32.38:152,0,32	0/0:37,0:30:56.70:0,57,782	0/1:21,0:20:99:274,0,130	0/1:24,13:36:99:639,0,124	0/1:21,19:40:20.45:318,0,20	0/1:23,1:24:74.36:134,0,74	1/1:15,0:14:17.27:217,17,0	0/1:24,0:22:99:154,0,243	0/0:22,0:22:62.88:0,63,749	0/1:8,13:22:18.67:19,0,127	0/0:15,0:14:31.35:0,31,482	0/1:16,3:18:63.15:63,0,248	0/1:10,7:14:99:245,0,122	0/1:41,0:40:99:555,0,198	0/1:10,4:13:56.86:78,0,57	0/1:22,7:28:98.87:109,0,99	0/1:24,0:24:90.65:91,0,333	0/1:12,0:11:32.37:71,0,32	0/1:24,0:24:99:217,0,149	0/1:12,12:25:11.71:638,0,12	0/1:15,11:27:72.48:185,0,72	0/1:22,0:20:74.48:429,0,74
chr10	25466093	.	AGATAGAT	A	4856.44	PASS	AB=0.926;AC=23;AF=0.411;AN=56;BaseQRankSum=-5.484;DP=626;FS=2.099;HRun=0;HaplotypeScore=254.1693;InbreedingCoeff=-0.5850;MQ=47.65;MQ0=9;MQRankSum=0.039;QD=8.85;ReadPosRankSum=-0.490;VQSLOD=2.9814;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:30:99:121,0,140	0/0:9,0:9:8.49:0,8,171	0/0:9,0:5:14.99:0,15,174	0/0:4,0:1:3.01:0,3,42	0/1:22,8:30:42.41:42,0,331	0/1:17,2:18:47.90:279,0,48	0/1:16,1:16:30.58:31,0,153	0/1:35,0:28:98.33:152,0,98	0/1:18,3:20:93.47:93,0,442	0/1:37,3:38:99:673,0,1054	0/1:34,6:40:99:406,0,416	0/1:21,4:25:99:118,0,258	0/1:13,1:13:33.87:34,0,282	0/1:21,2:21:99:137,0,230	0/0:21,0:21:52.80:0,53,545	0/0:20,0:20:8.51:0,9,48	0/0:14,0:13:15.31:0,15,234	0/1:14,1:14:66.82:67,0,211	0/1:16,1:14:99:161,0,359	0/1:37,3:39:99:551,0,670	0/1:11,2:12:60.03:60,0,145	0/1:26,2:28:99:274,0,172	0/1:26,0:26:14.46:14,0,318	1/1:11,1:11:14.92:323,15,0	0/1:23,0:23:99:288,0,309	0/1:30,0:30:99:408,0,1098	0/1:26,4:30:99:358,0,305	0/1:19,1:19:99:266,0,489
chr10	25466097	.	AGAT	A	2453.02	PASS	AB=0.933;AC=24;AF=0.429;AN=56;BaseQRankSum=1.254;DP=618;FS=0.909;HRun=0;HaplotypeScore=236.2482;InbreedingCoeff=-0.6140;MQ=48.75;MQ0=8;MQRankSum=0.976;QD=4.48;ReadPosRankSum=-3.391;VQSLOD=1.5785;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:30:83.10:83,0,186	0/1:7,2:9:41.44:41,0,101	0/0:10,0:6:14.96:0,15,174	0/0:5,0:2:6.02:0,6,74	0/0:28,0:28:7.17:0,7,355	0/1:17,2:18:24.94:143,0,25	0/1:16,1:16:30.58:31,0,153	0/1:34,0:29:99:314,0,259	0/1:20,1:20:47.35:47,0,339	0/1:39,3:40:99:256,0,1000	0/1:38,2:40:99:193,0,279	0/1:23,0:23:10.34:10,0,214	0/0:15,0:14:16.83:0,17,349	0/1:19,1:18:90.48:90,0,186	0/1:21,0:21:5.34:5,0,331	0/1:17,5:22:78.88:85,0,79	0/0:13,0:12:10.60:0,11,276	0/1:13,0:12:13.63:14,0,89	0/1:13,2:12:39.98:40,0,315	0/1:39,3:41:99:250,0,673	0/1:11,1:11:16.49:16,0,99	0/1:28,1:29:88.48:88,0,132	0/1:16,9:25:99:250,0,252	1/1:10,1:10:13.88:122,14,0	0/1:20,1:21:99:130,0,276	0/1:29,2:31:99:171,0,927	0/1:27,3:30:99:153,0,323	0/1:20,0:20:75.53:76,0,461
chr10	25466108	.	AGAT	A	204.59	PASS	AB=0.975;AC=6;AF=0.107;AN=56;BaseQRankSum=6.580;DP=608;FS=1.354;HRun=0;HaplotypeScore=254.8170;InbreedingCoeff=0.1211;MQ=53.02;MQ0=5;MQRankSum=-6.020;QD=1.57;ReadPosRankSum=-3.729;VQSLOD=2.1147;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:24,3:27:14.44:14,0,111	0/0:7,0:7:8.54:0,9,173	0/0:17,0:11:19.28:0,19,420	0/0:11,0:6:9.10:0,9,155	0/0:28,1:29:30.57:0,31,655	0/0:18,0:17:3.64:0,4,71	0/0:16,0:15:15.05:0,15,314	0/1:32,0:27:99:135,0,167	0/0:19,0:18:16.22:0,16,469	0/0:42,0:40:1.16:0,1,1511	0/1:41,0:41:43.67:44,0,381	0/0:25,0:25:13.92:0,14,339	0/0:16,0:15:27.09:0,27,612	0/0:20,0:18:21.54:0,22,477	0/0:21,0:21:56.15:0,56,1131	0/0:22,0:22:18.06:0,18,313	1/1:9,0:8:8.97:113,9,0	0/0:14,0:14:16.95:0,17,285	0/0:15,0:14:5.04:0,5,649	0/0:36,1:36:35.66:0,36,1204	0/0:13,0:12:6.94:0,7,201	0/0:26,0:26:10.64:0,11,272	0/0:26,0:26:32.09:0,32,657	0/0:8,0:7:0.89:0,1,3	0/0:16,0:16:21.54:0,22,477	0/0:29,0:29:6.28:0,6,1385	0/0:30,1:31:6.14:0,6,655	0/1:21,0:21:18.97:19,0,770
chr10	25466143	.	GGATA	G	671.61	PASS	AB=1.000;AC=9;AF=0.180;AN=50;BaseQRankSum=-0.499;DP=570;FS=0.973;HRun=0;HaplotypeScore=232.0051;InbreedingCoeff=0.7839;MQ=56.93;MQ0=4;MQRankSum=-0.199;QD=6.65;ReadPosRankSum=1.223;VQSLOD=2.7070;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:8.73:0,9,229	0/0:6,0:6:8.94:0,9,143	0/0:32,0:18:25.53:0,26,617	0/0:20,0:9:12.18:0,12,58	0/0:22,0:22:30.10:0,30,765	./.	1/1:4,7:11:9.03:158,9,0	0/0:16,0:15:30.09:0,30,393	0/0:17,0:16:27.09:0,27,585	0/0:29,0:29:69.28:0,69,1607	0/0:32,0:32:15.04:0,15,329	1/1:8,19:27:11.99:210,12,0	0/0:23,0:21:33.06:0,33,827	0/0:25,0:23:24.08:0,24,612	0/0:23,0:23:60.15:0,60,1418	0/0:22,0:22:12.03:0,12,306	./.	0/1:12,0:12:4.07:4,0,171	0/0:12,0:11:21.07:0,21,518	0/0:39,0:38:57.19:0,57,1451	0/0:7,0:6:5.40:0,5,152	1/1:7,20:27:12.03:183,12,0	1/1:8,16:24:15.05:263,15,0	./.	0/0:16,0:16:21.06:0,21,533	0/0:34,0:33:78.22:0,78,1765	0/0:29,0:28:39.12:0,39,928	0/0:20,0:20:45.02:0,45,1075
chr10	25466156	.	GACAT	G	161.50	PASS	AB=0.939;AC=12;AF=0.240;AN=50;BaseQRankSum=6.095;DP=538;FS=18.363;HRun=0;HaplotypeScore=203.0807;InbreedingCoeff=0.5358;MQ=50.83;MQ0=7;MQRankSum=-3.556;QD=1.14;ReadPosRankSum=-1.553;VQSLOD=1.4643;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:10.44:0,10,253	0/0:5,0:5:5.95:0,6,102	0/0:28,0:13:16.52:0,17,622	0/0:17,0:6:6.88:0,7,55	0/0:25,0:25:30.10:0,30,838	./.	1/1:7,0:7:7.79:37,8,0	1/1:11,0:10:1.02:13,1,0	0/0:15,0:14:21.05:0,21,499	0/1:31,1:32:99:134,0,1505	0/0:27,1:28:12.04:0,12,333	1/1:24,2:26:5.53:22,6,0	0/0:21,1:21:25.12:0,25,809	0/0:25,0:23:23.86:0,24,659	0/0:23,0:23:69.24:0,69,1801	0/0:16,0:15:11.75:0,12,335	./.	0/1:9,1:10:69.28:69,0,153	0/0:11,0:9:24.01:0,24,507	0/0:37,3:40:57.18:0,57,1455	0/0:6,0:6:5.40:0,5,167	1/1:30,1:31:5.02:13,5,0	1/1:25,0:25:6.85:15,7,0	./.	0/0:17,0:18:20.91:0,21,494	0/0:30,0:29:10.46:0,10,1675	0/0:29,0:27:42.13:0,42,1040	0/0:20,0:20:23.19:0,23,1152
chr10	25466191	.	GAT	G	2780.43	PASS	AB=0.791;AC=35;AF=0.673;AN=52;BaseQRankSum=1.070;DP=585;FS=2.240;HRun=0;HaplotypeScore=176.1501;InbreedingCoeff=0.1071;MQ=32.07;MQ0=15;MQRankSum=0.434;QD=5.43;ReadPosRankSum=-4.063;VQSLOD=2.1069;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,4:23:13.48:0,13,198	1/1:6,1:5:3.01:41,3,0	0/0:10,0:3:9.01:0,9,131	./.	1/1:25,11:30:5.90:75,6,0	1/1:11,6:14:3.01:30,3,0	1/1:16,1:15:2.21:12,2,0	1/1:7,11:11:30.10:426,30,0	1/1:13,5:13:5.90:85,6,0	0/1:26,9:34:99:420,0,361	1/1:17,7:24:9.03:129,9,0	0/1:16,8:22:0.06:0,0,35	1/1:19,8:23:22.49:233,22,0	1/1:16,8:20:6.74:77,7,0	0/0:20,2:21:54.09:0,54,901	1/1:14,5:14:6:67,6,0	0/0:7,1:8:2.03:0,2,9	0/1:12,1:13:66.34:66,0,140	0/1:8,0:8:93.89:94,0,107	1/1:33,13:42:11.76:110,12,0	1/1:7,1:7:3.01:42,3,0	0/1:17,17:32:11.07:18,0,11	0/1:29,10:33:0:0,0,0	./.	1/1:16,8:21:2.99:23,3,0	0/1:15,12:24:99:541,0,147	0/1:23,8:23:13.31:345,0,13	0/1:9,7:13:40.71:101,0,41
chr10	25466193	.	T	TG	661.39	PASS	AB=0.842;AC=24;AF=0.444;AN=54;BaseQRankSum=1.645;DP=593;FS=0.000;HRun=0;HaplotypeScore=188.4008;InbreedingCoeff=-0.1342;MQ=31.53;MQ0=14;MQRankSum=-1.495;QD=1.57;ReadPosRankSum=-4.578;VQSLOD=1.3792;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:23:15.99:0,16,183	1/1:7,0:5:2.84:14,3,0	0/0:9,0:3:9.03:0,9,125	./.	0/1:27,8:31:3.45:3,0,21	1/1:16,0:15:2.41:9,2,0	1/1:13,0:12:2.18:9,2,0	0/1:25,0:18:10.26:29,0,10	1/1:14,1:14:4.34:43,4,0	0/1:23,8:33:99:256,0,362	0/0:17,4:25:1.34:0,1,4	0/0:19,1:22:8.66:0,9,89	0/1:17,7:24:37.69:78,0,38	0/1:16,5:20:0.63:5,0,1	0/0:23,0:22:54.04:0,54,752	0/0:14,2:14:7.36:0,7,50	1/1:6,1:8:2.36:9,2,0	0/1:12,0:14:40.37:40,0,123	0/1:8,0:8:19.15:19,0,176	0/1:39,5:44:6.95:7,0,38	0/0:7,0:7:1.55:0,2,4	0/1:33,0:33:14.50:14,0,55	0/0:32,4:31:2.85:0,3,25	0/1:1,2:5:0:0,0,0	0/1:22,3:22:16.01:18,0,16	0/1:23,4:24:99:200,0,185	0/1:24,4:21:39.25:39,0,49	0/1:14,1:12:9.04:9,0,81
chr10	25466195	.	TAG	T	974.69	PASS	AB=0.963;AC=27;AF=0.500;AN=54;BaseQRankSum=2.097;DP=593;FS=12.997;HRun=0;HaplotypeScore=187.1758;InbreedingCoeff=-0.0008;MQ=31.35;MQ0=14;MQRankSum=-0.492;QD=2.20;ReadPosRankSum=0.688;VQSLOD=1.9986;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:24:18.29:0,18,296	1/1:7,0:5:2.99:24,3,0	0/0:6,0:2:6.02:0,6,93	./.	0/1:35,1:30:15.23:19,0,15	1/1:18,0:15:2.74:12,3,0	0/0:14,0:11:1.82:0,2,6	0/1:30,0:23:99:158,0,158	1/1:17,0:14:3.49:45,3,0	0/1:33,1:33:99:141,0,587	1/1:24,1:25:8.83:54,9,0	0/1:22,0:20:0.21:0,0,50	0/1:28,0:24:1.30:61,0,1	1/1:24,0:20:5.82:27,6,0	0/0:26,0:25:54.16:0,54,975	1/1:17,0:12:2.76:17,3,0	0/0:9,0:9:3.66:0,4,25	0/1:14,0:14:10.20:10,0,253	0/1:6,2:8:80.12:80,0,120	1/1:46,1:43:2.01:24,2,0	1/1:7,1:7:2.92:17,3,0	0/0:34,0:32:2.59:0,3,20	0/1:32,3:29:0:0,0,0	0/0:5,1:6:2.04:0,2,6	0/0:25,0:22:2.77:0,3,9	0/1:25,2:24:99:245,0,230	0/1:29,0:21:35.45:163,0,35	0/1:16,0:13:23.45:23,0,109
chr10	25466200	.	AGAT	A	2883.38	PASS	AB=0.968;AC=34;AF=0.654;AN=52;BaseQRankSum=-1.906;DP=622;FS=4.402;HRun=0;HaplotypeScore=194.1930;InbreedingCoeff=-0.2988;MQ=31.62;MQ0=15;MQRankSum=3.718;QD=5.09;ReadPosRankSum=-5.439;VQSLOD=1.1928;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:29:70.52:71,0,160	1/1:7,0:5:3.01:45,3,0	0/1:5,0:2:10.53:11,0,36	./.	1/1:40,0:34:17.53:208,18,0	0/1:20,0:17:17.23:17,0,40	1/1:15,0:12:2.43:15,2,0	0/0:32,0:25:41.80:0,42,593	0/1:18,3:16:21.34:188,0,21	0/1:26,8:33:99:601,0,361	1/1:21,4:25:5.91:93,6,0	0/1:24,0:22:18.64:19,0,33	1/1:26,1:23:20.36:269,20,0	1/1:23,0:19:3.52:17,4,0	0/1:24,1:24:54.60:55,0,622	1/1:18,1:14:2.73:46,3,0	0/0:12,0:12:6.27:0,6,53	0/1:15,0:15:52.25:52,0,294	0/1:10,0:8:6.21:6,0,276	0/1:46,0:42:37.56:52,0,38	./.	0/1:34,1:33:32.83:69,0,33	1/1:38,0:32:6.02:90,6,0	1/1:5,2:7:3:29,3,0	1/1:22,4:23:8.56:131,9,0	0/1:28,1:26:99:522,0,192	0/1:27,1:20:40.23:255,0,40	0/1:18,0:15:98.06:176,0,98
chr10	25466250	.	TAG	T	381.58	PASS	AB=0.833;AC=4;AF=0.071;AN=56;BaseQRankSum=6.328;DP=686;FS=6.210;HRun=0;HaplotypeScore=161.2551;InbreedingCoeff=-0.0803;MQ=54.87;MQ0=12;MQRankSum=-6.134;QD=3.67;ReadPosRankSum=-4.426;VQSLOD=0.4722;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,1:35:44.13:0,44,689	0/0:9,4:11:21.07:0,21,319	0/0:18,0:10:26.61:0,27,314	0/0:18,0:13:13.49:0,13,174	0/0:21,7:24:27.07:0,27,406	0/0:17,2:16:14.89:0,15,237	0/0:18,2:21:18.94:0,19,275	0/1:22,10:26:89.77:394,0,90	0/0:20,3:18:33.10:0,33,531	0/1:34,4:38:64.01:64,0,1127	0/0:20,2:22:33.11:0,33,502	0/0:27,1:26:25.53:0,26,458	0/0:32,2:31:62.73:0,63,925	0/0:21,1:19:16.65:0,17,281	0/0:23,0:22:3.33:0,3,616	0/0:21,5:21:29.94:0,30,476	0/1:18,2:19:0.04:0,0,135	0/0:14,1:14:23.51:0,24,375	0/1:7,2:10:22.16:22,0,187	0/0:41,6:44:62.57:0,63,973	0/0:13,0:14:27.09:0,27,429	0/0:25,3:27:30.10:0,30,464	0/0:26,5:25:24.06:0,24,357	0/0:9,0:10:6.02:0,6,100	0/0:26,8:31:56.86:0,57,882	0/0:30,1:30:21.40:0,21,1048	0/0:19,4:16:24.61:0,25,507	0/0:11,3:12:24.01:0,24,352
chr10	25466298	.	TGATA	T	4839.75	PASS	AB=0.947;AC=23;AF=0.442;AN=52;BaseQRankSum=-0.356;DP=627;FS=0.000;HRun=0;HaplotypeScore=150.2667;InbreedingCoeff=0.8262;MQ=52.13;MQ0=16;MQRankSum=-0.580;QD=17.41;ReadPosRankSum=-0.330;VQSLOD=4.5299;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:23.49:0,23,461	1/1:7,3:10:9.03:138,9,0	./.	./.	0/0:13,0:13:21.07:0,21,464	0/0:15,0:14:21.07:0,21,490	0/0:17,0:16:12.02:0,12,177	0/0:40,0:30:2.50:0,2,9	1/1:10,7:16:24.08:368,24,0	1/1:24,7:31:27.09:414,27,0	1/1:16,8:24:27.55:394,28,0	0/0:25,0:25:15.04:0,15,301	0/0:25,0:32:36.12:0,36,584	0/0:17,0:21:17.08:0,17,259	1/1:8,19:27:54.18:827,54,0	0/0:28,0:26:27.09:0,27,603	1/1:9,0:15:2.99:28,3,0	0/0:15,0:15:21.02:0,21,384	0/0:5,0:9:13.91:0,14,141	0/0:29,0:40:54.16:0,54,901	0/0:14,0:20:33.11:0,33,603	1/1:12,5:16:17.78:254,18,0	0/1:17,1:18:27.41:27,0,312	0/0:9,0:9:8.76:0,9,210	1/1:20,16:36:33.07:505,33,0	1/1:22,7:30:8.10:349,8,0	1/1:14,12:27:54.14:801,54,0	1/1:14,11:25:47.72:735,48,0
chr10	25466604	.	TAC	T	3092.20	PASS	AB=0.863;AC=40;AF=0.741;AN=54;BaseQRankSum=1.606;DP=525;FS=4.078;HRun=0;HaplotypeScore=78.8860;InbreedingCoeff=0.1868;MQ=68.61;MQ0=9;MQRankSum=0.109;QD=7.67;ReadPosRankSum=-0.134;VQSLOD=2.7660;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:34:6:0,6,51	1/1:4,0:6:2.84:14,3,0	./.	0/0:37,0:21:5.85:0,6,55	1/1:8,7:16:20.83:201,21,0	0/1:16,3:20:27.32:101,0,27	1/1:6,0:6:2.82:33,3,0	0/1:25,0:23:33.05:85,0,33	1/1:13,10:24:33.78:302,34,0	0/1:12,1:11:1.10:39,0,1	1/1:8,5:15:11.86:113,12,0	1/1:7,6:15:23.73:224,24,0	1/1:8,11:19:13.46:193,13,0	1/1:10,7:18:18.05:198,18,0	0/1:18,1:20:3:3,0,336	1/1:9,8:19:11.69:94,12,0	0/0:10,0:19:18.87:0,19,154	0/1:9,3:12:7.04:85,0,7	0/1:9,1:10:20.82:27,0,21	1/1:14,6:22:14.70:127,15,0	1/1:15,9:25:26.64:258,27,0	1/1:6,5:13:17.88:179,18,0	1/1:12,7:19:23.26:230,23,0	0/1:15,7:22:21:205,0,21	1/1:10,3:13:6.02:66,6,0	0/1:12,3:17:15.28:118,0,15	1/1:9,8:17:23.89:262,24,0	1/1:3,7:11:11.70:94,12,0
chr10	25466704	.	G	GTA	1457.37	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=-8.880;DP=615;FS=2.212;HRun=0;HaplotypeScore=74.5442;InbreedingCoeff=0.7569;MQ=61.90;MQ0=0;MQRankSum=1.781;QD=30.36;ReadPosRankSum=-5.552;VQSLOD=3.4486;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:93.18:0,93,1165	0/0:11,0:11:33.11:0,33,445	0/1:6,0:5:3.60:4,0,4	0/0:7,0:4:7.02:0,7,35	0/0:32,0:32:90.26:0,90,1167	0/0:24,0:22:63.15:0,63,799	0/0:10,0:10:27.09:0,27,364	1/1:8,33:42:99:1552,102,0	0/0:19,0:19:57.16:0,57,737	0/0:32,0:32:81.21:0,81,1024	0/0:16,0:16:48.16:0,48,648	0/0:16,0:16:47.96:0,48,557	0/0:27,0:27:73.42:0,73,909	0/0:28,0:28:78.23:0,78,1020	0/0:25,0:25:75.19:0,75,948	0/0:21,0:21:60.14:0,60,745	0/0:10,0:10:30.10:0,30,405	0/0:10,0:10:24.04:0,24,303	0/0:27,0:27:69.19:0,69,871	0/0:37,0:37:99:0,102,1327	0/0:24,0:24:63.18:0,63,819	0/0:27,0:27:75.18:0,75,959	0/0:20,0:20:57.16:0,57,738	0/0:17,0:17:42.11:0,42,534	0/0:25,0:25:66.17:0,66,843	0/0:22,0:22:63.21:0,63,849	0/0:24,0:24:66.14:0,66,820	0/0:20,0:20:45.13:0,45,590
chr10	25467017	.	GT	G	2566.17	PASS	AB=1.000;AC=40;AF=0.714;AN=56;BaseQRankSum=5.165;DP=584;FS=2.850;HRun=2;HaplotypeScore=133.5106;InbreedingCoeff=0.1689;MQ=74.87;MQ0=0;MQRankSum=2.472;QD=4.88;ReadPosRankSum=2.952;VQSLOD=0.9346;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:20,0:20:3.50:27,0,4	0/1:15,0:15:5.22:23,0,5	0/0:18,0:16:28.31:0,28,411	0/0:17,0:15:36.05:0,36,498	0/1:31,0:31:19.82:71,0,20	1/1:23,0:23:14.58:82,15,0	1/1:9,0:9:8.38:40,8,0	1/1:36,0:36:78.29:316,78,0	0/1:18,0:18:5.11:41,0,5	1/1:30,0:30:42.91:217,43,0	0/1:13,0:13:9.86:29,0,10	1/1:23,0:23:21.71:109,22,0	0/1:14,0:14:15.82:42,0,16	1/1:28,0:28:25.54:116,26,0	0/0:23,0:23:66.20:0,66,946	1/1:24,0:24:15.01:65,15,0	1/1:1,19:20:51.16:654,51,0	1/1:15,0:15:3.14:26,3,0	1/1:21,0:21:2.67:136,3,0	1/1:24,0:24:22.49:93,22,0	1/1:10,0:10:8.17:23,8,0	0/1:21,0:20:0.68:67,0,1	0/1:28,0:27:12.10:18,0,12	0/1:9,0:9:7.42:64,0,7	1/1:23,0:23:12.96:77,13,0	1/1:22,0:22:48.43:189,48,0	0/1:31,0:30:0.32:93,0,0	1/1:18,0:18:4.80:110,5,0
chr10	25467269	.	A	AAC	727.65	PASS	AB=0.970;AC=25;AF=0.568;AN=44;BaseQRankSum=-1.319;DP=587;FS=15.381;HRun=0;HaplotypeScore=113.5637;InbreedingCoeff=-0.0422;MQ=49.34;MQ0=19;MQRankSum=-1.900;QD=2.12;ReadPosRankSum=0.973;VQSLOD=1.2163;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:28:5.59:0,6,26	0/1:4,0:4:0:0,0,0	./.	./.	0/1:21,2:23:28.86:29,0,72	1/1:22,1:21:2.66:38,3,0	0/0:21,0:20:8.63:0,9,94	./.	0/1:12,2:15:22.80:32,0,23	1/1:21,0:19:6.01:65,6,0	1/1:13,0:12:2.90:16,3,0	0/1:15,0:15:0:0,0,0	0/1:26,0:25:20.06:20,0,62	1/1:15,4:21:5.49:87,5,0	0/1:17,0:17:1.42:37,0,1	0/1:33,3:35:75.50:186,0,75	0/1:22,0:22:23.22:40,0,23	1/1:12,0:10:5.82:33,6,0	./.	1/1:10,2:12:3.01:44,3,0	0/0:22,0:19:3:0,3,31	./.	0/0:14,4:16:0:0,0,0	1/1:24,4:27:15.03:188,15,0	./.	0/1:19,0:19:1.14:17,0,1	0/1:25,0:23:4.03:4,0,26	0/1:10,0:10:15.96:16,0,25
chr10	25469156	.	CA	C	1174.19	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.648;DP=575;FS=17.312;HRun=8;HaplotypeScore=55.1954;InbreedingCoeff=0.9944;MQ=82.27;MQ0=0;MQRankSum=-1.410;QD=23.02;ReadPosRankSum=-3.112;VQSLOD=1.5447;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:66.19:0,66,784	0/0:10,0:10:21.06:0,21,251	0/0:20,0:20:48.12:0,48,542	0/0:11,0:11:21.06:0,21,245	0/0:27,0:27:81.23:0,81,957	0/0:25,0:25:72.22:0,72,870	0/0:19,0:19:51.16:0,51,615	1/1:5,34:39:99:977,102,0	0/0:17,0:17:48.15:0,48,580	0/0:26,0:26:63.19:0,63,752	0/0:20,0:20:60.18:0,60,725	0/0:17,0:17:45.14:0,45,544	0/0:18,0:18:51.14:0,51,604	0/0:18,0:18:54.17:0,54,652	0/0:20,0:20:54.17:0,54,652	0/0:22,0:22:48.13:0,48,569	1/1:0,12:12:33.05:319,33,0	0/0:13,0:13:33.10:0,33,399	0/0:25,0:25:60.15:0,60,709	0/0:24,0:24:60.18:0,60,725	0/0:23,0:23:63.19:0,63,761	0/0:10,0:10:24.07:0,24,290	0/0:16,0:16:39.11:0,39,461	0/0:24,0:24:63.19:0,63,761	0/0:26,0:26:72.22:0,72,870	0/0:27,0:27:81.24:0,81,969	0/0:28,0:28:78.24:0,78,941	0/0:12,0:12:36.11:0,36,435
chr10	25470299	.	A	AG	1789.86	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-7.819;DP=632;FS=2.581;HRun=0;HaplotypeScore=59.1684;InbreedingCoeff=0.9974;MQ=76.22;MQ0=0;MQRankSum=-1.444;QD=31.40;ReadPosRankSum=-2.687;VQSLOD=2.6247;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:84.21:0,84,1109	0/0:9,0:9:24.08:0,24,332	0/0:21,0:21:60.03:0,60,674	0/0:10,0:11:31.83:0,32,370	0/0:30,0:30:79.33:0,79,1198	0/0:31,0:31:90.28:0,90,1216	0/0:13,0:13:29.06:0,29,474	1/1:0,31:31:90.16:1122,90,0	0/0:20,0:20:60.17:0,60,799	0/0:28,0:28:84.27:0,84,1155	0/0:25,0:25:74.84:0,75,1011	0/0:17,0:17:51.14:0,51,674	0/0:27,0:27:81.25:0,81,1093	0/0:25,0:25:72.23:0,72,972	0/0:29,0:29:87.24:0,87,1143	0/0:22,0:21:63.17:0,63,841	1/1:0,26:26:54.18:789,54,0	0/0:9,0:9:23.98:0,24,318	0/0:20,0:20:57.17:0,57,776	0/0:23,0:23:66.20:0,66,896	0/0:22,0:22:66.20:0,66,898	0/0:18,0:18:54.15:0,54,705	0/0:25,0:25:75.23:0,75,1010	0/0:20,0:20:57.15:0,57,755	0/0:22,0:22:63.19:0,63,846	0/0:31,0:31:93.28:0,93,1236	0/0:34,0:34:99:0,99,1358	0/0:15,0:15:45.15:0,45,621
chr10	25471217	.	CTT	C	6206.46	PASS	AB=0.964;AC=49;AF=0.907;AN=54;BaseQRankSum=-1.304;DP=391;FS=23.506;HRun=12;HaplotypeScore=62.9789;InbreedingCoeff=0.6754;MQ=73.26;MQ0=4;MQRankSum=-1.130;QD=17.63;ReadPosRankSum=2.910;VQSLOD=1.9386;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,0:10:24.19:100,24,0	1/1:0,10:10:23.96:242,24,0	0/1:26,1:10:7.85:8,0,47	0/0:23,0:15:16.25:0,16,195	1/1:2,24:26:54.52:601,55,0	1/1:1,14:15:39.08:397,39,0	1/1:1,2:3:6.01:61,6,0	1/1:32,0:32:19.01:308,19,0	1/1:1,9:10:24.01:234,24,0	1/1:6,11:18:35.76:344,36,0	1/1:3,9:12:24.04:240,24,0	1/1:3,7:10:23.91:227,24,0	1/1:2,15:17:33.06:329,33,0	1/1:1,8:8:12.02:122,12,0	0/0:14,0:15:39.12:0,39,545	1/1:1,9:10:21.04:214,21,0	1/1:20,0:21:43.93:221,44,0	1/1:3,8:11:17.84:183,18,0	1/1:2,9:11:7.64:242,8,0	1/1:1,13:15:35.64:343,36,0	./.	1/1:1,6:7:15.02:149,15,0	1/1:1,10:11:21.04:211,21,0	1/1:0,3:3:6.01:61,6,0	1/1:2,16:18:41.98:402,42,0	1/1:1,14:15:39.06:395,39,0	1/1:1,18:20:35.81:347,36,0	1/1:1,10:11:8.08:225,8,0
chr10	25471228	.	TTC	T	1912.28	PASS	AB=0.996;AC=34;AF=0.607;AN=56;BaseQRankSum=5.397;DP=418;FS=11.217;HRun=0;HaplotypeScore=83.5930;InbreedingCoeff=-0.1435;MQ=72.09;MQ0=4;MQRankSum=-0.189;QD=5.03;ReadPosRankSum=8.686;VQSLOD=0.5507;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:13:27.95:190,28,0	1/1:10,0:10:21.29:93,21,0	0/1:33,0:12:1.01:1,0,38	0/1:31,0:20:10.43:10,0,178	0/1:28,0:28:8.68:131,0,9	1/1:15,0:15:8.73:77,9,0	0/1:5,0:5:3.42:3,0,23	0/0:22,0:22:3.46:0,3,165	0/1:10,0:10:1.69:55,0,2	1/1:12,0:12:20.44:86,20,0	0/1:13,1:14:32.20:74,0,32	1/1:10,0:10:1.10:65,1,0	1/1:18,1:19:20.87:94,21,0	0/1:9,0:8:10.68:26,0,11	0/0:14,0:14:41.94:0,42,507	0/1:10,0:10:3.05:22,0,3	1/1:3,21:24:48:604,48,0	0/1:10,0:10:16.02:22,0,16	0/1:10,0:10:12.36:31,0,12	0/1:20,0:20:85.38:105,0,85	0/0:2,0:2:5.98:0,6,47	1/1:6,1:7:0.04:67,0,0	0/1:11,0:11:3.82:51,0,4	0/1:4,0:4:11.88:12,0,16	1/1:18,1:19:2.03:117,2,0	0/1:18,0:18:60.66:64,0,61	0/1:21,0:21:1.79:48,0,2	0/1:16,0:16:16.11:16,0,112
chr10	25471230	.	CT	C	136.66	PASS	AB=0.930;AC=4;AF=0.071;AN=56;BaseQRankSum=3.793;DP=421;FS=1.872;HRun=12;HaplotypeScore=85.8033;InbreedingCoeff=0.3519;MQ=71.90;MQ0=4;MQRankSum=-1.046;QD=3.25;ReadPosRankSum=-1.474;VQSLOD=0.3713;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,13:13:26.83:226,27,0	0/1:9,1:10:4.75:5,0,144	0/0:33,0:13:22.78:0,23,160	0/0:32,0:20:0.28:0,0,129	0/0:28,0:28:66.05:0,66,639	0/0:15,0:15:42.05:0,42,415	0/0:5,0:5:12.03:0,12,125	0/0:22,0:22:41.38:0,41,340	0/0:10,0:10:26.99:0,27,260	0/0:13,0:13:23.88:0,24,224	0/0:14,0:14:7.50:0,7,268	0/0:9,0:10:20.08:0,20,212	0/1:18,1:19:12.13:12,0,288	0/0:9,0:8:15.01:0,15,147	0/0:14,0:14:36.10:0,36,398	0/0:10,0:10:24.06:0,24,251	0/0:22,0:23:17:0,17,58	0/0:10,0:10:24.53:0,25,249	0/0:10,0:10:14.75:0,15,188	0/0:20,0:20:50.32:0,50,472	0/0:2,0:2:6.02:0,6,66	0/0:7,0:7:13.24:0,13,113	0/0:11,0:11:20.06:0,20,203	0/0:4,0:4:9.01:0,9,89	0/0:20,0:20:39.05:0,39,441	0/0:16,1:18:15.96:0,16,364	0/0:21,0:21:42.06:0,42,417	0/0:16,0:16:42.10:0,42,444
chr10	25471426	.	GT	G	703.46	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.924;DP=583;FS=14.314;HRun=3;HaplotypeScore=61.9886;InbreedingCoeff=0.9600;MQ=57.17;MQ0=1;MQRankSum=-1.403;QD=24.26;ReadPosRankSum=0.733;VQSLOD=2.0081;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:90.21:0,90,1222	0/0:6,0:6:15.05:0,15,216	0/0:13,0:10:27.09:0,27,381	0/0:28,0:23:66.21:0,66,913	0/0:23,0:23:66.22:0,66,950	0/0:16,0:16:45.11:0,45,625	0/0:22,0:21:54.14:0,54,754	1/1:0,4:3:9.03:111,9,0	0/0:23,0:23:51.13:0,51,711	0/0:15,0:15:36.12:0,36,519	0/0:17,0:17:51.17:0,51,734	0/0:23,0:23:54.03:0,54,736	0/0:19,0:19:54.16:0,54,758	0/0:15,0:15:36.12:0,36,518	0/0:28,0:28:69.19:0,69,970	0/0:32,0:32:93.23:0,93,1291	1/1:2,23:24:57.18:706,57,0	0/0:37,0:35:96.32:0,96,1380	0/0:17,0:16:45.15:0,45,648	0/0:18,0:18:51.17:0,51,733	0/0:37,0:37:99:0,108,1529	0/0:9,0:9:27.09:0,27,389	0/0:17,0:17:45.15:0,45,646	0/0:25,0:25:60.20:0,60,861	0/0:18,0:18:54.18:0,54,777	0/0:28,0:28:78.25:0,78,1101	0/0:19,0:19:54.18:0,54,777	0/0:13,0:13:39.13:0,39,561
chr10	25471906	.	G	GT	4917.29	PASS	AB=0.663;AC=38;AF=0.679;AN=56;BaseQRankSum=-8.250;DP=371;FS=1.126;HRun=12;HaplotypeScore=44.2914;InbreedingCoeff=0.4899;MQ=69.84;MQ0=1;MQRankSum=1.176;QD=16.78;ReadPosRankSum=0.766;VQSLOD=5.7297;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:22:28.02:0,28,82	1/1:0,10:10:27.04:262,27,0	0/1:14,0:9:1.67:2,0,2	0/0:8,1:8:4.44:0,4,23	0/1:8,12:21:23.61:302,0,24	1/1:2,11:13:24.04:233,24,0	0/0:7,0:8:16.91:0,17,115	0/0:5,0:12:15.18:0,15,57	1/1:0,10:11:20.87:189,21,0	1/1:3,15:18:45.07:438,45,0	0/1:4,14:22:49.99:203,0,50	1/1:3,5:8:9.01:88,9,0	1/1:1,12:14:32.89:304,33,0	1/1:3,10:13:30.03:285,30,0	0/0:12,0:13:34.84:0,35,247	1/1:0,11:11:33.05:321,33,0	0/0:1,0:8:14.26:0,14,42	0/1:6,12:18:7.64:256,0,8	1/1:5,9:14:24.04:233,24,0	1/1:3,11:14:11.11:261,11,0	1/1:2,12:14:24.04:233,24,0	1/1:0,8:8:24.04:234,24,0	1/1:3,7:10:15.91:148,16,0	1/1:1,7:8:18.03:175,18,0	0/1:3,13:16:4.75:282,0,5	1/1:7,8:15:0.24:205,0,0	0/1:8,11:20:5.87:233,0,6	1/1:0,1:1:3:29,3,0
chr10	25472946	.	A	AT	320.82	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=6.065;DP=562;FS=0.000;HRun=6;HaplotypeScore=62.0154;InbreedingCoeff=0.7563;MQ=73.07;MQ0=0;MQRankSum=-0.851;QD=13.37;ReadPosRankSum=0.249;VQSLOD=2.4979;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:54.12:0,54,551	0/0:8,0:8:24.05:0,24,245	0/1:8,0:8:0.89:1,0,77	0/0:10,0:11:18.78:0,19,161	0/0:36,0:36:96.19:0,96,971	0/0:28,0:28:78.14:0,78,787	0/0:13,0:13:39.09:0,39,398	0/0:31,0:31:84.19:0,84,857	0/0:21,0:21:60.12:0,60,605	0/0:25,0:25:69.15:0,69,699	0/0:27,0:27:75.14:0,75,751	0/0:19,0:19:51.12:0,51,520	0/0:26,0:26:72.14:0,72,727	0/0:15,0:15:42.09:0,42,428	0/0:24,0:24:66.12:0,66,663	0/0:18,0:18:48.11:0,48,490	1/1:3,13:16:33.11:415,33,0	0/0:8,0:8:17.02:0,17,163	0/0:28,0:28:75.16:0,75,760	0/0:24,0:24:66.15:0,66,673	0/0:9,0:9:18.04:0,18,183	0/0:27,0:27:81.17:0,81,820	0/0:22,0:22:57.13:0,57,581	0/0:10,0:10:30.07:0,30,306	0/0:20,0:20:57.13:0,57,582	0/0:22,0:22:63.14:0,63,643	0/0:34,0:34:93.18:0,93,935	0/0:12,0:12:36.08:0,36,363
chr10	25473095	.	TAAG	T	1329.17	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.692;DP=673;FS=1.485;HRun=0;HaplotypeScore=90.6476;InbreedingCoeff=0.9984;MQ=83.19;MQ0=1;MQRankSum=-5.643;QD=42.88;ReadPosRankSum=-4.116;VQSLOD=3.9287;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:51.15:0,51,1081	0/0:9,0:9:27.09:0,27,595	0/0:22,0:22:54.16:0,54,1036	0/0:19,0:19:48.16:0,48,1036	0/0:25,0:25:69.24:0,69,1523	0/0:24,0:24:63.22:0,63,1374	0/0:33,0:33:96.32:0,96,2050	1/1:1,30:31:90.31:1424,90,0	0/0:23,0:23:69.24:0,69,1521	0/0:25,0:25:75.26:0,75,1657	0/0:26,0:26:72.25:0,72,1589	0/0:19,0:19:54.19:0,54,1192	0/0:33,0:33:93.31:0,93,2010	0/0:22,0:22:63.22:0,63,1375	0/0:25,0:25:72.25:0,72,1587	0/0:28,0:28:84.29:0,84,1838	0/0:24,0:24:66.20:0,66,1413	0/0:13,0:13:39.13:0,39,807	0/0:11,0:11:30.10:0,30,638	0/0:34,0:34:99:0,102,2235	0/0:22,0:21:57.20:0,57,1233	0/0:30,0:30:87.30:0,87,1921	0/0:29,0:29:78.25:0,78,1681	0/0:22,0:22:66.23:0,66,1438	0/0:21,0:21:63.19:0,63,1348	0/0:32,0:32:93.31:0,93,1990	0/0:30,0:29:87.30:0,87,1918	0/0:22,0:22:66.23:0,66,1451
chr10	25473711	.	A	AT	400.28	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-4.053;DP=488;FS=2.463;HRun=2;HaplotypeScore=47.0378;InbreedingCoeff=0.9520;MQ=70.20;MQ0=0;MQRankSum=-1.340;QD=33.36;ReadPosRankSum=-1.632;VQSLOD=2.9106;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,12:12:36.08:495,36,0	0/0:8,0:8:21.07:0,21,260	0/0:7,0:7:18.06:0,18,219	0/0:5,0:5:11.97:0,12,103	0/0:27,0:27:81.24:0,81,992	0/0:16,0:16:48.15:0,48,595	0/0:8,0:8:24.08:0,24,298	0/0:35,0:35:93.28:0,93,1143	0/0:19,0:19:57.18:0,57,707	0/0:21,0:21:63.16:0,63,764	0/0:23,0:23:66.21:0,66,818	0/0:18,0:18:54.17:0,54,669	0/0:21,0:21:60.16:0,60,717	0/0:19,0:19:57.17:0,57,694	0/0:18,0:18:51.16:0,51,632	0/0:20,0:20:54.17:0,54,669	0/0:17,0:17:51.16:0,51,632	0/0:28,0:28:78.24:0,78,967	0/0:20,0:20:57.17:0,57,695	0/0:20,0:20:57.18:0,57,706	0/0:19,0:19:57.18:0,57,706	0/0:11,0:11:30.09:0,30,372	0/0:18,0:18:54.17:0,54,669	0/0:10,0:10:30.09:0,30,372	0/0:17,0:17:51.15:0,51,621	0/0:26,0:26:78.25:0,78,967	0/0:18,0:18:54.15:0,54,656	0/0:7,0:7:21.07:0,21,260
chr10	25473933	.	T	TACAC	882.39	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=1.507;DP=482;FS=2.965;HRun=0;HaplotypeScore=86.1651;InbreedingCoeff=0.6677;MQ=63.78;MQ0=0;MQRankSum=-3.612;QD=15.21;ReadPosRankSum=-3.359;VQSLOD=2.4935;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,0:14:16.98:94,17,0	0/0:9,0:9:24.05:0,24,364	0/0:30,0:20:6.02:0,6,96	0/0:23,0:17:18.03:0,18,232	0/0:31,0:31:74.78:0,75,1070	0/0:17,0:18:28.31:0,28,552	0/0:13,0:14:33.07:0,33,454	1/1:23,9:32:42.11:855,42,0	0/0:10,0:10:15.05:0,15,242	0/0:22,0:22:51.16:0,51,810	0/0:20,0:20:54.17:0,54,841	0/0:18,0:18:48.16:0,48,777	0/0:15,0:15:33.04:0,33,504	0/0:13,0:13:36.11:0,36,557	0/0:17,0:18:36.11:0,36,561	0/0:13,0:13:36.12:0,36,586	0/1:12,0:12:60.42:60,0,311	0/0:11,0:11:6.02:0,6,98	0/0:17,0:17:36.11:0,36,562	0/0:18,0:19:45.10:0,45,679	0/0:15,0:15:27.07:0,27,414	0/0:3,0:3:6.02:0,6,96	0/0:14,0:15:32.47:0,32,473	0/0:12,0:12:21.02:0,21,312	0/0:18,0:18:42.14:0,42,666	0/0:17,0:19:27.08:0,27,418	0/0:26,0:26:60.20:0,60,970	0/0:15,0:14:27.09:0,27,439
chr10	25474278	.	TA	T	659.82	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.827;DP=472;FS=0.000;HRun=9;HaplotypeScore=46.2813;InbreedingCoeff=0.9564;MQ=73.24;MQ0=0;MQRankSum=-2.738;QD=18.33;ReadPosRankSum=-4.221;VQSLOD=2.1367;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:87.20:0,87,969	0/0:12,0:12:33.10:0,33,381	0/0:17,0:16:32.54:0,33,345	0/0:13,0:13:23.83:0,24,224	0/0:19,0:19:54.15:0,54,615	0/0:23,0:23:54.16:0,54,623	0/0:7,0:7:18.05:0,18,208	1/1:7,29:36:83.99:755,84,0	0/0:13,0:13:27.08:0,27,312	0/0:13,0:13:30.08:0,30,339	0/0:13,0:13:39.12:0,39,448	0/0:8,0:8:18.05:0,18,208	0/0:22,0:22:57.17:0,57,658	0/0:23,0:23:63.15:0,63,706	0/0:20,0:20:57.15:0,57,640	0/0:16,0:16:30.09:0,30,346	0/0:33,0:33:78.22:0,78,891	0/0:11,0:11:29.82:0,30,319	0/0:11,0:11:32.92:0,33,350	0/0:17,0:17:48.08:0,48,520	0/0:14,0:15:38.94:0,39,420	0/0:5,0:5:15.04:0,15,173	0/0:13,0:13:39.12:0,39,450	0/0:18,0:18:54.16:0,54,623	0/0:18,0:18:48.12:0,48,537	0/0:18,0:18:42.12:0,42,477	0/0:17,0:17:48.14:0,48,554	0/0:7,0:7:18.05:0,18,208
chr10	25477249	.	GA	G	1093.25	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=1.846;DP=753;FS=3.519;HRun=1;HaplotypeScore=132.2713;InbreedingCoeff=0.9985;MQ=69.85;MQ0=0;MQRankSum=0.644;QD=28.77;ReadPosRankSum=1.919;VQSLOD=3.5996;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,38:38:87.22:1188,87,0	0/0:9,0:9:27.09:0,27,412	0/0:16,0:16:48.15:0,48,727	0/0:13,0:13:38.16:0,38,579	0/0:29,0:29:87.19:0,87,1288	0/0:34,0:34:93.25:0,93,1420	0/0:30,0:30:90.21:0,90,1348	0/0:25,0:25:70.99:0,71,855	0/0:26,0:26:72.24:0,72,1134	0/0:30,0:30:90.30:0,90,1415	0/0:16,0:16:45.15:0,45,714	0/0:33,0:33:96.22:0,96,1494	0/0:37,0:37:99:0,108,1663	0/0:28,0:28:81.26:0,81,1252	0/0:38,0:38:99:0,114,1779	0/0:35,0:35:96.31:0,96,1500	0/0:28,0:28:75.21:0,75,890	0/0:11,0:11:33.04:0,33,451	0/0:22,0:22:66.16:0,66,960	0/0:12,0:12:36.08:0,36,505	0/0:33,0:33:87.23:0,87,1314	0/0:28,0:28:81.23:0,81,1219	0/0:16,0:16:45.14:0,45,694	0/0:38,0:38:93.28:0,93,1424	0/0:34,0:34:99:0,102,1587	0/0:34,0:34:99:0,102,1583	0/0:43,0:43:99:0,129,1989	0/0:17,0:17:51.17:0,51,804
chr10	25477255	.	T	TA	2009.35	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-6.783;DP=747;FS=2.581;HRun=1;HaplotypeScore=126.7304;InbreedingCoeff=0.9953;MQ=73.02;MQ0=0;MQRankSum=2.419;QD=34.06;ReadPosRankSum=-2.511;VQSLOD=2.8017;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:83.93:0,84,745	0/0:10,0:10:21.07:0,21,272	0/0:19,0:19:54.13:0,54,655	0/0:16,0:16:44.85:0,45,519	0/0:27,0:27:72.23:0,72,931	0/0:33,0:33:90.13:0,90,1091	0/0:28,0:28:78.24:0,78,992	1/1:3,25:28:72.21:1023,72,0	0/0:27,0:27:72.19:0,72,912	0/0:33,0:33:93.22:0,93,1165	0/0:16,0:16:42.05:0,42,521	0/0:33,0:33:96.26:0,96,1209	0/0:36,0:36:99:0,102,1302	0/0:27,0:27:72.20:0,72,912	0/0:37,0:37:99:0,105,1359	0/0:35,0:35:99:0,99,1195	1/1:0,31:31:75.25:1108,75,0	0/0:8,0:8:21.07:0,21,272	0/0:19,0:19:57.19:0,57,738	0/0:9,0:9:27.09:0,27,350	0/0:31,0:31:87.21:0,87,1077	0/0:25,0:25:72.23:0,72,931	0/0:14,0:14:42.14:0,42,544	0/0:35,0:35:96.20:0,96,1189	0/0:37,0:37:99:0,105,1297	0/0:35,0:35:99:0,102,1293	0/0:42,0:42:99:0,120,1532	0/0:18,0:18:51.10:0,51,640
chr10	25481563	.	GA	G	731.42	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.069;DP=660;FS=12.766;HRun=7;HaplotypeScore=73.6648;InbreedingCoeff=0.9051;MQ=82.06;MQ0=0;MQRankSum=1.600;QD=23.59;ReadPosRankSum=1.762;VQSLOD=2.9756;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,108,1310	0/0:13,0:13:39.12:0,39,490	0/0:25,0:25:63.15:0,63,758	0/0:19,0:19:7.46:0,7,339	0/0:29,1:30:47.63:0,48,884	0/0:40,0:40:93.29:0,93,1157	0/0:14,0:14:33.09:0,33,400	0/0:24,0:24:54.17:0,54,678	0/0:28,0:28:72.23:0,72,905	0/0:31,0:31:78.23:0,78,957	0/0:20,0:20:54.17:0,54,676	0/0:27,0:27:69.18:0,69,850	0/0:29,0:29:84.23:0,84,1039	0/0:28,0:28:72.23:0,72,905	0/0:25,0:25:60.15:0,60,736	0/0:26,0:26:75.21:0,75,926	1/1:3,28:31:81.18:826,81,0	0/0:7,0:7:15.05:0,15,189	0/0:17,0:17:51.15:0,51,628	0/0:31,0:31:81.21:0,81,989	0/0:19,0:19:48.15:0,48,604	0/0:15,0:15:30.01:0,30,342	0/0:21,0:21:51.10:0,51,607	0/0:13,0:13:30.10:0,30,377	0/0:25,0:25:69.22:0,69,868	0/0:28,0:28:69.20:0,69,853	0/0:26,0:26:75.20:0,75,923	0/0:6,0:6:18.04:0,18,211
chr10	25482240	.	A	ACC	1085.41	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-1.062;DP=625;FS=0.763;HRun=7;HaplotypeScore=130.4573;InbreedingCoeff=0.9964;MQ=80.26;MQ0=0;MQRankSum=-4.720;QD=32.89;ReadPosRankSum=0.143;VQSLOD=2.4450;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,29:33:72.25:1180,72,0	0/0:10,0:10:24.07:0,24,280	0/0:28,0:27:53.62:0,54,653	0/0:30,0:29:81.21:0,81,920	0/0:26,0:26:60.14:0,60,698	0/0:11,0:11:30.09:0,30,349	0/0:27,0:27:69.07:0,69,751	0/0:24,0:24:57.13:0,57,647	0/0:21,0:21:57.15:0,57,653	0/0:24,0:24:57.16:0,57,664	0/0:18,0:18:51.15:0,51,590	0/0:26,0:26:72.18:0,72,816	0/0:28,0:28:63.12:0,63,711	0/0:21,0:21:60.16:0,60,687	0/0:14,0:14:36.10:0,36,419	0/0:20,0:20:54.16:0,54,629	0/0:20,0:20:36.09:0,36,419	0/0:15,0:15:29.90:0,30,338	0/0:13,0:13:33.08:0,33,366	0/0:23,0:23:54.13:0,54,617	0/0:33,0:33:78.18:0,78,885	0/0:26,0:26:69.19:0,69,803	0/0:21,0:21:50.82:0,51,583	0/0:26,0:26:72.21:0,72,839	0/0:19,0:19:42.09:0,42,476	0/0:25,0:25:72.21:0,72,838	0/0:21,0:21:51.07:0,51,593	0/0:22,0:22:48.13:0,48,559
chr10	25482746	.	CGCTTCGTCAAATG	C	635.25	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.950;DP=606;FS=3.774;HRun=0;HaplotypeScore=177.1754;InbreedingCoeff=0.8835;MQ=59.96;MQ0=38;MQRankSum=-3.940;QD=42.35;ReadPosRankSum=2.056;VQSLOD=3.5148;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:30:75.26:0,75,4598	0/0:7,0:6:15.05:0,15,778	0/0:34,0:19:51.17:0,51,1695	0/0:29,0:11:23.91:0,24,926	0/0:14,0:12:36.12:0,36,1903	0/0:20,0:18:48.16:0,48,2620	0/0:31,0:31:84.29:0,84,5024	0/0:31,0:29:81.28:0,81,4628	0/0:19,0:17:45.15:0,45,2687	0/0:20,0:19:54.19:0,54,2906	0/0:7,0:6:12.04:0,12,777	0/0:28,0:26:72.20:0,72,4269	0/0:26,0:22:54.19:0,54,3177	0/0:43,0:40:99:0,111,6892	0/0:22,0:21:57.20:0,57,3226	0/0:24,0:22:57.20:0,57,3532	1/1:3,12:13:18.06:726,18,0	0/0:24,0:24:69.22:0,69,4002	0/0:27,0:21:57.19:0,57,3260	0/0:10,0:8:21.07:0,21,1337	0/0:35,0:35:99:0,99,6255	0/0:9,0:8:21.07:0,21,1049	0/0:9,0:8:21.07:0,21,1145	0/0:31,0:31:78.27:0,78,4908	0/0:11,0:8:24.08:0,24,1393	0/0:14,0:12:30.10:0,30,1609	0/0:27,0:27:60.05:0,60,2984	0/0:7,0:3:9.03:0,9,596
chr10	25482965	.	A	AG	212.60	PASS	AC=16;AF=1.000;AN=16;DP=126;FS=0.000;HRun=2;HaplotypeScore=13.7992;MQ=32.80;MQ0=0;QD=3.80;VQSLOD=0.0357;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,2:11:5.94:42,6,0	./.	./.	./.	./.	1/1:7,0:6:2.99:24,3,0	./.	./.	./.	1/1:9,0:9:2.99:23,3,0	./.	./.	./.	./.	1/1:2,0:2:3:25,3,0	1/1:6,2:7:8.91:66,9,0	1/1:4,1:5:2.98:21,3,0	1/1:5,1:5:2.98:21,3,0	./.	./.	./.	./.	./.	1/1:7,1:8:8.86:60,9,0	./.	./.	./.	./.
chr10	25486168	.	TAGATAGAG	T	7458.27	PASS	AB=1.000;AC=43;AF=0.827;AN=52;BaseQRankSum=1.707;DP=607;FS=9.586;HRun=0;HaplotypeScore=192.3661;InbreedingCoeff=-0.2105;MQ=47.74;MQ0=44;MQRankSum=2.241;QD=13.22;ReadPosRankSum=1.250;VQSLOD=3.3271;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:25:7.95:57,8,0	1/1:5,0:5:8.94:91,9,0	./.	./.	1/1:29,0:29:30.72:234,31,0	1/1:17,0:16:32.68:397,33,0	0/1:14,0:13:12.91:92,0,13	1/1:41,0:27:41.36:240,41,0	1/1:19,0:19:34.23:358,34,0	1/1:25,0:24:62.42:890,62,0	1/1:23,0:23:47.98:612,48,0	1/1:27,0:27:50.85:563,51,0	1/1:25,0:24:43.19:540,43,0	1/1:19,0:18:29.62:366,30,0	0/1:24,0:24:99:334,0,185	1/1:17,0:17:13.27:100,13,0	0/1:23,0:23:1.30:113,0,1	0/1:19,0:17:48.63:83,0,49	1/1:13,0:10:26.95:318,27,0	1/1:23,0:23:53.77:685,54,0	1/1:13,0:12:21.01:256,21,0	1/1:19,0:19:39.05:531,39,0	1/1:5,23:26:3.48:51,3,0	0/1:14,0:13:11.33:37,0,11	0/1:35,0:34:84.66:240,0,85	0/1:24,0:22:99:136,0,118	0/1:27,0:25:25.44:25,0,121	0/1:12,0:12:21.95:108,0,22
chr10	25486172	.	TAGAG	T	5695.12	PASS	AB=0.975;AC=45;AF=0.865;AN=52;BaseQRankSum=5.485;DP=613;FS=1.999;HRun=0;HaplotypeScore=169.4201;InbreedingCoeff=-0.1341;MQ=47.44;MQ0=48;MQRankSum=2.891;QD=10.08;ReadPosRankSum=0.864;VQSLOD=4.5750;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:22,7:25:9.98:447,10,0	1/1:5,0:5:7.49:46,7,0	./.	./.	1/1:20,6:26:51.30:613,51,0	1/1:17,0:16:30.63:179,31,0	1/1:14,0:13:8.68:57,9,0	1/1:44,0:30:16.22:285,16,0	1/1:17,1:18:30.97:225,31,0	1/1:24,0:23:61.27:368,61,0	1/1:23,0:23:37.80:245,38,0	1/1:24,0:24:42.53:286,43,0	1/1:24,0:23:33.03:206,33,0	1/1:21,0:20:11.09:163,11,0	0/1:25,0:25:81.03:81,0,263	1/1:10,7:17:32.86:391,33,0	0/1:24,0:24:48.46:129,0,48	0/1:19,0:17:53.60:101,0,54	1/1:14,0:11:13.74:146,14,0	1/1:24,0:24:43.88:275,44,0	1/1:12,0:11:13.72:98,14,0	1/1:20,0:20:21.57:145,22,0	1/1:27,0:26:2.03:5,2,0	0/1:11,3:13:5.41:144,0,5	0/1:38,0:37:57.02:381,0,57	0/1:22,0:20:25.20:343,0,25	0/1:29,0:27:85.20:186,0,85	1/1:11,0:11:18.56:149,19,0
chr10	25486176	.	GAGAT	G	7481.28	PASS	AB=0.996;AC=35;AF=0.673;AN=52;BaseQRankSum=-7.653;DP=604;FS=11.011;HRun=0;HaplotypeScore=163.8153;InbreedingCoeff=-0.0773;MQ=47.13;MQ0=49;MQRankSum=-0.236;QD=16.19;ReadPosRankSum=-2.224;VQSLOD=3.5558;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:24:18.43:227,18,0	1/1:5,0:5:0.16:46,0,0	./.	./.	1/1:27,0:27:51.58:681,52,0	1/1:17,0:16:1.04:286,1,0	1/1:12,0:11:4.03:135,4,0	0/0:41,0:28:5.44:0,5,71	1/1:17,0:17:5.23:315,5,0	1/1:26,0:25:35.21:544,35,0	0/1:23,0:23:12.34:234,0,12	0/1:25,0:25:9.62:505,0,10	0/1:21,1:21:16.12:242,0,16	0/1:20,0:19:18.69:301,0,19	0/0:25,0:25:52.94:0,53,719	1/1:19,0:19:23.99:315,24,0	0/1:24,0:24:99:234,0,152	0/1:19,0:17:99:146,0,138	0/1:13,0:11:2.39:178,0,2	0/1:23,0:23:18.84:298,0,19	0/1:14,0:13:7.36:166,0,7	0/1:20,0:20:37.62:178,0,38	0/0:25,0:24:2.04:0,2,6	0/1:14,0:13:20.65:145,0,21	1/1:27,9:35:54.18:902,54,0	1/1:16,5:19:45.11:687,45,0	1/1:3,23:24:20.63:351,21,0	1/1:11,0:11:27.05:363,27,0
chr10	25487006	.	ATCTTCAGTGGCCTTACTACT	A	1221.02	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.335;DP=746;FS=4.514;HRun=0;HaplotypeScore=408.1725;InbreedingCoeff=0.9959;MQ=87.58;MQ0=0;MQRankSum=-1.878;QD=38.16;ReadPosRankSum=-3.866;VQSLOD=0.8218;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,114,9229	0/0:14,0:14:42.14:0,42,3217	0/0:20,0:20:47.90:0,48,2281	0/0:34,0:34:81.24:0,81,4554	0/0:30,0:30:75.24:0,75,6412	0/0:30,0:30:87.27:0,87,6657	0/0:16,0:16:45.09:0,45,3270	1/1:12,20:32:57.16:1316,57,0	0/0:19,0:19:48.15:0,48,3939	0/0:22,0:22:63.21:0,63,5149	0/0:22,0:22:63.22:0,63,5375	0/0:31,0:31:78.26:0,78,6211	0/0:29,0:29:75.22:0,75,6008	0/0:27,0:27:72.23:0,72,5605	0/0:38,0:38:99:0,102,8600	0/0:27,0:27:69.22:0,69,5442	0/0:36,0:36:87.30:0,87,7190	0/0:7,0:7:21.04:0,21,1614	0/0:27,0:27:60.16:0,60,3548	0/0:24,0:24:60.21:0,60,5197	0/0:47,0:47:99:0,132,11791	0/0:18,0:18:51.16:0,51,4214	0/0:27,0:27:63.22:0,63,5088	0/0:32,0:32:90.29:0,90,7399	0/0:27,0:27:81.28:0,81,6914	0/0:28,0:28:81.28:0,81,7291	0/0:20,0:20:54.19:0,54,4421	0/0:18,0:18:45.08:0,45,2819
chr10	25487466	.	GT	G	9944.90	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=3.779;DP=623;FS=21.604;HRun=11;HaplotypeScore=72.1902;InbreedingCoeff=0.8948;MQ=73.31;MQ0=2;MQRankSum=-3.915;QD=18.87;ReadPosRankSum=2.299;VQSLOD=4.0501;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,22:23:56.93:468,57,0	1/1:2,10:12:20.96:173,21,0	0/0:25,0:17:10.45:0,10,197	0/0:22,0:19:27.39:0,27,313	1/1:3,29:33:85.92:694,86,0	1/1:3,25:28:62.92:517,63,0	1/1:1,18:19:50.94:419,51,0	1/1:5,19:25:30.03:442,30,0	1/1:2,17:20:43.96:347,44,0	1/1:4,30:34:83.83:687,84,0	1/1:0,18:18:50.93:418,51,0	1/1:5,21:27:58.87:474,59,0	1/1:2,21:23:56.93:468,57,0	1/1:5,20:26:52.36:423,52,0	0/0:24,0:24:69.17:0,69,730	1/1:2,21:23:50.94:419,51,0	0/0:25,0:25:38.53:0,39,615	1/1:1,5:6:11.99:99,12,0	1/1:4,11:15:32.91:264,33,0	1/1:1,24:25:56.91:465,57,0	1/1:0,14:14:35.96:296,36,0	1/1:2,15:17:44.94:369,45,0	1/1:0,27:28:68.90:566,69,0	1/1:0,14:14:38.96:320,39,0	1/1:5,19:27:51.93:388,52,0	1/1:4,24:28:42.93:556,43,0	1/1:8,21:30:6.97:459,7,0	1/1:2,10:11:0.98:214,1,0
chr10	25487735	.	T	TTTGAAAAGAA	2956.10	PASS	AB=0.714;AC=29;AF=0.967;AN=30;BaseQRankSum=-1.473;DP=43;FS=3.716;HRun=0;HaplotypeScore=22.2968;InbreedingCoeff=-0.1257;MQ=110.18;MQ0=0;MQRankSum=-1.733;QD=70.38;ReadPosRankSum=-0.520;VQSLOD=2.7774;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,0:1:3:25,3,0	./.	1/1:1,0:4:9.03:410,9,0	0/1:3,1:5:2.55:352,0,3	1/1:5,0:5:15.04:334,15,0	1/1:1,0:1:3.01:118,3,0	1/1:1,0:1:3.01:74,3,0	1/1:6,0:6:15.05:346,15,0	1/1:3,0:3:9.03:252,9,0	./.	./.	1/1:1,0:1:3.01:42,3,0	./.	1/1:3,0:3:8.98:73,9,0	1/1:2,0:2:6.02:195,6,0	./.	./.	./.	1/1:1,0:1:3.01:78,3,0	./.	1/1:1,0:1:3.01:50,3,0	./.	./.	./.	1/1:3,0:3:9.01:249,9,0	./.	1/1:5,0:5:15.04:432,15,0	./.
chr10	25489114	.	GT	G	937.83	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-6.825;DP=589;FS=2.251;HRun=6;HaplotypeScore=93.9494;InbreedingCoeff=0.9905;MQ=82.90;MQ0=0;MQRankSum=1.098;QD=24.05;ReadPosRankSum=-4.406;VQSLOD=1.2619;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:36.12:0,36,473	0/0:9,0:9:27.09:0,27,355	0/0:18,0:18:50.63:0,51,525	0/0:16,0:16:48.12:0,48,594	0/0:32,0:32:93.27:0,93,1180	0/0:31,0:31:90.26:0,90,1142	0/0:12,0:12:36.12:0,36,468	1/1:5,34:39:99:1033,99,0	0/0:20,0:20:54.18:0,54,710	0/0:27,0:27:78.24:0,78,1005	0/0:25,0:25:66.17:0,66,822	0/0:20,0:20:54.14:0,54,679	0/0:34,0:34:99:0,99,1281	0/0:20,0:20:54.16:0,54,686	0/0:23,0:23:69.20:0,69,880	0/0:14,0:14:39.09:0,39,482	0/0:18,0:18:54.18:0,54,706	0/0:9,0:9:20.99:0,21,238	0/0:24,0:24:72.21:0,72,897	0/0:20,0:20:57.18:0,57,736	0/0:21,0:21:63.20:0,63,827	0/0:12,0:12:36.12:0,36,473	0/0:22,0:22:66.20:0,66,849	0/0:20,0:20:60.14:0,60,730	0/0:21,0:21:63.17:0,63,797	0/0:26,0:25:75.22:0,75,943	0/0:37,0:37:99:0,105,1336	0/0:7,0:7:21.06:0,21,263
chr10	25490178	.	G	GTATA	4739.03	PASS	AB=0.626;AC=47;AF=0.839;AN=56;BaseQRankSum=-0.939;DP=254;FS=4.666;HRun=0;HaplotypeScore=47.3159;InbreedingCoeff=-0.0479;MQ=70.59;MQ0=5;MQRankSum=-1.687;QD=20.43;ReadPosRankSum=1.048;VQSLOD=4.0557;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:5:3.01:52,3,0	1/1:2,2:4:3.01:74,3,0	1/1:11,0:4:1.77:4,2,0	0/0:22,0:10:5:0,5,18	1/1:3,4:10:11.78:213,12,0	1/1:4,10:14:15.05:370,15,0	1/1:4,0:4:3.01:49,3,0	1/1:13,0:12:8.99:76,9,0	1/1:8,3:12:5.75:86,6,0	1/1:8,0:8:15.04:242,15,0	1/1:3,2:9:11.24:111,11,0	0/1:3,4:8:35.08:220,0,35	0/1:4,1:11:26.90:156,0,27	1/1:2,2:4:6.02:148,6,0	0/1:4,0:9:16.39:16,0,41	1/1:4,6:10:18.06:426,18,0	1/1:0,0:6:9.03:155,9,0	1/1:1,6:8:20.81:456,21,0	0/1:5,0:13:24.46:114,0,24	0/1:2,2:7:79.56:165,0,80	0/1:2,0:3:6.67:7,0,44	1/1:3,0:3:3.01:48,3,0	1/1:2,0:6:5.75:82,6,0	1/1:1,1:2:3.01:74,3,0	1/1:2,4:9:17.77:309,18,0	1/1:6,5:17:32.26:493,32,0	1/1:10,1:17:17.15:221,17,0	0/1:2,5:9:26.37:371,0,26
chr10	25490456	.	CT	C	10559.91	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=9.553;DP=517;FS=0.000;HRun=7;HaplotypeScore=48.7344;InbreedingCoeff=0.9981;MQ=83.35;MQ0=0;MQRankSum=-3.746;QD=26.53;ReadPosRankSum=4.796;VQSLOD=4.9506;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:42.12:0,42,514	1/1:0,8:8:24.05:245,24,0	0/0:23,0:23:53.01:0,53,602	0/0:10,0:10:29.76:0,30,339	1/1:3,17:20:42.09:429,42,0	1/1:1,24:25:63.14:643,63,0	1/1:2,17:19:48.11:490,48,0	0/0:30,0:30:78.25:0,78,981	1/1:3,26:29:72.16:735,72,0	1/1:0,17:17:51.12:520,51,0	1/1:2,14:16:42.09:429,42,0	1/1:2,26:28:72.16:735,72,0	1/1:1,28:29:78.18:796,78,0	1/1:0,25:25:69.16:704,69,0	0/0:30,0:30:87.28:0,87,1095	1/1:0,19:19:57.13:582,57,0	0/0:11,0:11:27.04:0,27,322	1/1:0,11:11:30.07:306,30,0	1/1:1,14:15:42.09:429,42,0	1/1:5,14:19:42.09:428,42,0	1/1:2,12:14:36.08:367,36,0	1/1:1,11:12:27.06:275,27,0	1/1:1,8:9:24.05:245,24,0	1/1:2,10:12:27.06:275,27,0	1/1:1,14:15:36.08:367,36,0	1/1:1,19:20:57.13:582,57,0	1/1:2,24:26:66.15:673,66,0	1/1:0,10:10:30.07:306,30,0
chr10	25491493	.	G	GTT	2407.34	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-4.683;DP=529;FS=3.080;HRun=8;HaplotypeScore=64.2962;InbreedingCoeff=0.9350;MQ=76.20;MQ0=0;MQRankSum=-1.158;QD=29.00;ReadPosRankSum=-3.474;VQSLOD=3.0405;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:2,20:22:48.63:743,49,0	0/0:7,0:7:21.04:0,21,224	0/0:14,0:14:23.32:0,23,237	0/0:10,0:10:20.65:0,21,215	0/0:27,0:27:66.10:0,66,706	0/0:20,0:20:60.16:0,60,669	0/0:8,0:8:24.06:0,24,267	1/1:10,32:43:99:1518,102,0	0/0:13,0:13:39.11:0,39,434	0/0:23,0:23:63.16:0,63,702	0/0:20,0:20:54.13:0,54,591	0/0:13,0:13:36.10:0,36,401	0/0:18,0:18:48.10:0,48,526	0/0:20,0:20:54.14:0,54,602	0/0:21,0:21:63.16:0,63,692	0/0:21,0:21:60.15:0,60,668	1/1:3,0:18:30.05:289,30,0	0/0:17,0:17:45.12:0,45,502	0/0:21,0:20:57.06:0,57,603	0/0:32,0:32:87.19:0,87,951	0/0:14,0:14:33.07:0,33,368	0/0:20,0:20:54.13:0,54,602	0/0:20,0:20:57.15:0,57,634	0/0:15,0:15:33.08:0,33,367	0/0:16,0:17:39.02:0,39,482	0/0:18,0:18:54.15:0,54,601	0/0:32,0:31:72.14:0,72,792	0/0:5,0:5:2.89:0,3,33
chr10	25494043	.	AC	A	18093.99	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=10.702;DP=646;FS=0.326;HRun=1;HaplotypeScore=89.7323;InbreedingCoeff=0.9867;MQ=98.88;MQ0=0;MQRankSum=-8.117;QD=38.33;ReadPosRankSum=7.000;VQSLOD=4.5316;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:84.24:0,84,1211	1/1:0,7:7:18.06:251,18,0	0/0:36,0:36:99:0,106,1377	0/0:35,0:34:95.60:0,96,1197	1/1:0,20:20:51.04:686,51,0	1/1:0,22:22:60.19:822,60,0	1/1:0,23:23:60.20:839,60,0	0/0:27,0:27:81.25:0,81,1175	1/1:0,26:26:78.26:1090,78,0	1/1:0,27:27:81.24:1084,81,0	1/1:0,18:18:51.07:668,51,0	1/1:0,18:18:51.17:712,51,0	1/1:0,24:24:66.22:922,66,0	1/1:1,19:20:53.91:716,54,0	0/0:23,0:23:69.22:0,69,1013	1/1:0,25:25:69.23:964,69,0	0/0:24,0:24:72.20:0,72,1032	1/1:0,18:18:51.17:713,51,0	1/1:0,17:17:51.14:664,51,0	1/1:0,28:28:84.28:1174,84,0	1/1:0,38:38:99:1384,99,0	1/1:0,22:22:60.16:813,60,0	1/1:0,14:14:42.14:587,42,0	1/1:0,27:27:69.23:964,69,0	1/1:0,22:22:63.17:855,63,0	1/1:0,26:26:75.22:1014,75,0	1/1:0,27:27:75.25:1048,75,0	1/1:0,3:3:9.03:126,9,0
chr10	25495183	.	AAAAAAG	A	1381.16	PASS	AB=0.980;AC=23;AF=0.411;AN=56;BaseQRankSum=9.511;DP=472;FS=4.168;HRun=0;HaplotypeScore=116.5484;InbreedingCoeff=-0.5700;MQ=56.18;MQ0=14;MQRankSum=-7.204;QD=3.79;ReadPosRankSum=10.349;VQSLOD=-0.2180;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:22:45.05:0,45,517	0/1:4,1:5:39.15:44,0,39	0/0:18,0:5:11.74:0,12,85	0/1:13,0:9:2.12:2,0,22	0/1:26,0:26:99:154,0,101	0/1:20,0:20:99:154,0,149	0/1:13,0:13:43.37:58,0,43	0/0:22,0:21:14.62:0,15,280	0/1:14,0:14:85.24:85,0,109	0/1:27,0:27:99:99,0,259	0/1:20,1:20:96.26:189,0,96	0/1:21,0:21:43.70:44,0,148	0/1:20,1:20:15.36:15,0,44	0/1:11,0:10:13.91:14,0,37	0/0:22,0:22:48.60:0,49,777	0/1:17,1:18:52.08:52,0,140	0/1:19,0:17:37.66:38,0,51	0/1:19,0:13:30.72:52,0,31	0/1:13,0:13:4.06:4,0,131	0/1:25,0:25:99:173,0,128	1/1:1,0:1:2.98:22,3,0	0/1:11,0:11:9.36:9,0,80	0/1:22,0:21:99:108,0,152	0/0:13,0:13:2.49:0,2,107	0/1:10,0:10:10.31:10,0,110	0/1:15,2:17:72.91:73,0,94	0/1:17,0:17:43.51:132,0,44	0/0:10,0:9:4.78:0,5,86
chr10	25497624	.	T	TG	2919.62	PASS	AB=0.789;AC=25;AF=0.446;AN=56;BaseQRankSum=1.527;DP=681;FS=1.006;HRun=1;HaplotypeScore=84.9854;InbreedingCoeff=-0.4797;MQ=46.69;MQ0=105;MQRankSum=2.883;QD=6.19;ReadPosRankSum=6.477;VQSLOD=0.6352;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:13,20:24:33.14:33,0,114	0/1:9,3:10:14.22:143,0,14	0/0:68,0:26:71.40:0,71,858	0/0:64,0:25:64.37:0,64,719	0/1:10,9:15:45.83:78,0,46	0/1:16,4:15:99:168,0,165	0/0:6,15:13:5.28:0,5,48	0/1:22,0:19:82.45:334,0,82	1/1:19,2:18:5.99:61,6,0	0/1:14,10:19:99:204,0,207	0/1:14,5:15:15.42:178,0,15	0/1:9,16:20:54.74:57,0,55	0/1:15,0:11:49.56:68,0,50	0/1:13,16:23:30.27:30,0,85	0/0:27,0:27:49.79:0,50,618	0/0:11,18:22:9.30:0,9,89	0/1:20,12:27:5.82:581,0,6	0/1:12,1:9:20.74:21,0,139	0/1:18,0:15:96.08:109,0,96	1/1:14,0:13:18.42:256,18,0	0/1:13,19:23:0:0,0,0	0/1:17,5:15:37.54:201,0,38	0/1:10,10:15:10.46:10,0,64	0/1:22,3:13:99:138,0,99	0/1:10,9:14:69.98:70,0,71	0/1:8,7:13:99:167,0,160	0/1:16,0:14:99:130,0,109	0/1:6,1:4:40.48:40,0,57
chr10	25497625	.	GT	G	2324.72	PASS	AB=0.829;AC=23;AF=0.426;AN=54;BaseQRankSum=2.655;DP=676;FS=1.603;HRun=1;HaplotypeScore=85.8202;InbreedingCoeff=-0.6078;MQ=45.46;MQ0=105;MQRankSum=3.793;QD=5.34;ReadPosRankSum=5.715;VQSLOD=0.7681;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:24:6.77:7,0,188	0/1:8,4:10:26.19:118,0,26	0/0:68,0:26:71.40:0,71,858	0/0:63,0:24:64.37:0,64,719	0/1:19,0:15:29.98:30,0,78	0/1:15,5:15:99:168,0,234	0/0:18,2:12:5.59:0,6,73	0/1:9,12:18:99:334,0,148	1/1:21,0:18:0.28:35,0,0	0/1:22,1:18:99:161,0,344	0/1:13,4:13:26.84:153,0,27	0/1:24,0:19:34.04:34,0,141	0/1:9,6:11:65.99:68,0,66	0/1:27,1:22:8.31:8,0,109	0/0:28,0:28:56.58:0,57,753	0/0:30,0:23:13.27:0,13,181	0/1:26,7:28:99:386,0,108	0/1:9,4:9:20.73:21,0,178	0/1:10,8:15:99:109,0,108	0/1:6,8:13:6.07:236,0,6	./.	0/1:16,6:15:52.93:177,0,53	0/1:19,1:15:11.72:12,0,85	0/1:13,12:13:99:137,0,134	0/1:18,0:13:18.88:19,0,116	0/1:15,0:13:99:122,0,238	0/1:11,6:15:99:127,0,209	0/1:4,2:4:14.20:14,0,82
chr10	25498458	.	GT	G	1076.81	PASS	AB=0.950;AC=5;AF=0.089;AN=56;BaseQRankSum=2.982;DP=520;FS=2.513;HRun=10;HaplotypeScore=77.8056;InbreedingCoeff=0.7757;MQ=73.29;MQ0=0;MQRankSum=0.282;QD=14.17;ReadPosRankSum=-2.026;VQSLOD=3.5872;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:3,0:34:82.07:0,82,407	0/0:2,0:2:6.02:0,6,66	0/0:14,0:13:11.68:0,12,234	0/1:18,1:14:2.13:2,0,168	0/0:22,0:23:56.99:0,57,611	0/0:19,0:19:54.15:0,54,597	0/0:15,2:17:16.06:0,16,405	1/1:6,29:35:86.97:755,87,0	0/0:9,0:10:26.91:0,27,280	0/0:19,0:19:45.11:0,45,491	0/0:16,0:16:42.11:0,42,465	0/0:19,0:20:56.97:0,57,603	0/0:14,2:16:16.01:0,16,384	0/0:13,0:13:39.08:0,39,414	0/0:13,1:14:10.06:0,10,339	0/0:18,1:19:31.10:0,31,571	1/1:2,20:22:50.98:442,51,0	0/0:25,0:25:64.31:0,64,690	0/0:18,0:18:39.11:0,39,431	0/0:16,0:17:50.87:0,51,542	0/0:16,0:16:48.13:0,48,531	0/0:16,0:16:38.16:0,38,458	0/0:17,0:18:51.01:0,51,545	0/0:12,0:12:36.09:0,36,390	0/0:24,0:26:74.81:0,75,782	0/0:21,0:22:63:0,63,678	0/0:22,0:21:51.14:0,51,564	0/0:15,0:16:41.95:0,42,446
chr10	25499167	.	ATGTGTG	A	7496.22	PASS	AC=44;AF=0.917;AN=48;BaseQRankSum=6.149;DP=460;FS=4.480;HRun=0;HaplotypeScore=228.0756;InbreedingCoeff=0.6758;MQ=63.26;MQ0=3;MQRankSum=-6.338;QD=19.12;ReadPosRankSum=5.690;VQSLOD=3.7130;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	1/1:13,0:13:18.06:255,18,0	0/0:31,0:21:41.88:0,42,907	0/0:15,0:11:21.02:0,21,480	1/1:19,0:19:18.06:259,18,0	1/1:14,0:14:24.08:370,24,0	1/1:16,0:16:9.03:156,9,0	1/1:13,25:38:75.23:1407,75,0	1/1:17,0:17:18.06:263,18,0	1/1:15,0:15:27.09:452,27,0	1/1:25,0:25:33.08:429,33,0	1/1:19,0:19:21.07:306,21,0	1/1:20,0:20:36.12:517,36,0	1/1:16,0:16:12.04:170,12,0	./.	1/1:14,0:14:6.02:84,6,0	1/1:2,11:13:8.06:138,8,0	1/1:8,0:8:3.01:42,3,0	1/1:19,0:19:33.11:555,33,0	1/1:24,0:24:21.07:302,21,0	./.	1/1:11,0:11:3.01:42,3,0	1/1:16,0:16:18.06:269,18,0	1/1:8,0:8:3.01:42,3,0	1/1:18,0:18:33.11:484,33,0	1/1:19,0:19:27.09:395,27,0	1/1:30,0:30:39.13:559,39,0	./.
chr10	25499173	.	GTGTGTGTGTATATATATATATATATATATA	G	30727.60	PASS	AB=1.000;AC=43;AF=0.827;AN=52;BaseQRankSum=7.573;DP=433;FS=20.121;HRun=0;HaplotypeScore=278.3752;InbreedingCoeff=0.6352;MQ=55.01;MQ0=3;MQRankSum=-4.562;QD=82.60;ReadPosRankSum=8.322;VQSLOD=2.5079;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	./.	1/1:0,11:11:18.06:1447,18,0	0/0:25,0:15:42.11:0,42,1203	0/0:13,0:9:24.06:0,24,686	1/1:1,18:19:21.07:1431,21,0	1/1:0,12:14:24.08:1851,24,0	1/1:2,11:14:12.04:801,12,0	0/1:32,0:32:99:260,0,975	1/1:1,17:18:18.06:1433,18,0	1/1:0,14:15:33.10:1056,33,0	1/1:3,20:24:39.13:2829,39,0	1/1:0,19:20:21.07:1658,21,0	1/1:0,20:20:35.84:2878,36,0	1/1:2,13:15:12.04:964,12,0	0/0:1,0:1:2.99:0,3,24	1/1:0,13:13:6.02:482,6,0	0/0:14,0:14:12.04:0,12,657	1/1:0,10:10:6.02:333,6,0	1/1:4,12:17:36.11:1676,36,0	1/1:0,21:22:21.07:1651,21,0	1/1:3,7:10:3.01:165,3,0	1/1:0,11:11:3.01:241,3,0	1/1:1,13:14:18.06:1338,18,0	1/1:1,8:9:3.01:241,3,0	1/1:0,18:18:33.11:2628,33,0	1/1:0,17:18:39.03:2237,39,0	1/1:0,28:28:39.13:3126,39,0	./.
chr10	25500044	.	A	AT	14277.38	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-11.734;DP=560;FS=2.367;HRun=6;HaplotypeScore=47.3556;InbreedingCoeff=0.9720;MQ=67.78;MQ0=0;MQRankSum=-0.979;QD=31.87;ReadPosRankSum=3.745;VQSLOD=5.0870;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:69:0,69,669	1/1:1,8:9:21.07:264,21,0	0/0:10,0:10:26.42:0,26,253	0/0:7,0:7:14.93:0,15,138	1/1:4,41:45:99:1378,111,0	1/1:4,13:17:39.12:491,39,0	1/1:1,13:14:36.12:453,36,0	0/0:27,0:27:75.61:0,76,750	1/1:1,16:17:42.13:528,42,0	1/1:1,18:19:54.16:668,54,0	1/1:3,25:28:78.11:931,78,0	1/1:1,15:16:36.12:453,36,0	1/1:3,20:23:54.17:679,54,0	1/1:3,15:18:45.14:566,45,0	0/0:24,0:24:69.09:0,69,681	1/1:2,20:22:51.16:642,51,0	0/0:21,0:20:57.12:0,57,576	1/1:2,25:27:69.22:868,69,0	1/1:2,16:18:48.12:577,48,0	1/1:3,33:37:99:1202,102,0	1/1:1,9:10:27.09:340,27,0	1/1:1,8:9:21.07:264,21,0	1/1:0,18:18:51.16:642,51,0	1/1:1,7:8:18.06:226,18,0	1/1:0,21:21:54.17:679,54,0	1/1:1,31:32:93.27:1145,93,0	1/1:1,36:37:96.31:1208,96,0	1/1:1,2:3:6.02:75,6,0
chr10	25501236	.	CAA	C	17945.63	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=2.788;DP=628;FS=5.484;HRun=8;HaplotypeScore=81.0251;InbreedingCoeff=0.9874;MQ=81.63;MQ0=5;MQRankSum=-5.393;QD=31.43;ReadPosRankSum=4.101;VQSLOD=4.9739;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,27:27:72.23:878,72,0	1/1:1,7:8:12.04:146,12,0	0/0:20,0:20:35.82:0,36,500	0/0:14,0:14:38.95:0,39,557	1/1:1,32:32:90.21:1079,90,0	1/1:2,19:21:48.15:585,48,0	1/1:1,20:21:60.19:732,60,0	1/1:3,26:29:75.20:890,75,0	1/1:4,16:20:42.12:512,42,0	1/1:1,38:39:99:1375,114,0	1/1:1,33:34:93.28:1131,93,0	1/1:0,15:14:39.12:476,39,0	1/1:2,19:20:45.13:549,45,0	1/1:2,25:26:56.93:695,57,0	0/0:23,0:23:63.21:0,63,1034	1/1:1,24:26:72.22:878,72,0	1/1:1,23:24:66.21:805,66,0	1/1:1,14:15:42.13:512,42,0	1/1:3,18:21:54.10:617,54,0	1/1:3,31:34:87.19:1043,87,0	1/1:0,12:12:33.10:403,33,0	1/1:1,24:25:69.21:838,69,0	1/1:1,20:21:54.17:656,54,0	1/1:2,12:14:36.11:439,36,0	1/1:0,25:25:69.22:842,69,0	1/1:0,17:17:51.16:622,51,0	1/1:3,27:30:81.25:985,81,0	1/1:0,12:11:21.07:256,21,0
chr10	25501670	.	A	AT	351.89	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.447;DP=613;FS=3.877;HRun=1;HaplotypeScore=66.2822;InbreedingCoeff=0.8589;MQ=81.00;MQ0=0;MQRankSum=-4.001;QD=16.76;ReadPosRankSum=1.435;VQSLOD=3.9978;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:68.43:0,68,864	0/0:3,0:3:9.03:0,9,117	0/0:24,0:23:69.18:0,69,847	0/0:23,0:23:67.94:0,68,830	0/0:30,0:30:84.25:0,84,1064	0/0:32,0:32:90.27:0,90,1137	0/0:23,0:23:63.18:0,63,789	0/0:30,0:30:72.23:0,72,918	0/0:16,0:16:45.08:0,45,563	0/0:29,0:29:84.22:0,84,1029	0/0:20,0:20:51.16:0,51,662	0/0:21,0:21:63.18:0,63,791	0/0:18,0:18:48.16:0,48,623	0/0:26,0:26:78.25:0,78,1011	0/0:26,0:26:78.25:0,78,999	0/0:29,0:29:84.23:0,84,1047	1/1:7,14:21:33.12:446,33,0	0/0:20,0:20:60.19:0,60,776	0/0:33,0:32:93.28:0,93,1178	0/0:21,0:21:60.17:0,60,750	0/0:22,0:22:60.18:0,60,764	0/0:15,0:15:42.14:0,42,545	0/0:20,0:20:57.04:0,57,699	0/0:27,0:27:75.21:0,75,943	0/0:11,0:11:30.10:0,30,389	0/0:24,0:24:69.22:0,69,895	0/0:23,0:23:69.16:0,69,861	0/0:2,0:2:6.02:0,6,78
chr10	25502438	.	A	AT	520.58	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-0.317;DP=737;FS=5.319;HRun=4;HaplotypeScore=74.7237;InbreedingCoeff=0.9990;MQ=84.54;MQ0=0;MQRankSum=-2.181;QD=26.03;ReadPosRankSum=0.665;VQSLOD=2.5477;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,129,1451	0/0:12,0:12:33.09:0,33,374	0/0:23,0:23:57.08:0,57,585	0/0:22,0:22:51.14:0,51,568	0/0:20,0:20:54.14:0,54,603	0/0:24,0:24:69.20:0,69,783	0/0:23,0:23:66.19:0,66,749	0/0:33,0:33:87.23:0,87,971	0/0:20,0:20:51.14:0,51,579	0/0:36,0:36:99:0,99,1123	0/0:24,0:24:72.21:0,72,817	0/0:40,0:40:99:0,114,1284	0/0:38,0:38:99:0,102,1146	0/0:34,0:34:99:0,99,1113	0/0:34,0:34:96.27:0,96,1088	0/0:31,0:31:90.24:0,90,1011	1/1:0,20:20:45.12:615,45,0	0/0:13,0:13:36.10:0,36,408	0/0:14,0:14:39.09:0,39,432	0/0:23,0:23:57.16:0,57,644	0/0:47,0:47:99:0,132,1497	0/0:27,0:27:75.21:0,75,851	0/0:22,0:22:63.16:0,63,705	0/0:18,0:18:51.13:0,51,567	0/0:17,0:17:51.15:0,51,579	0/0:25,0:25:66.17:0,66,740	0/0:42,0:42:99:0,123,1384	0/0:10,0:10:30.09:0,30,339
chr10	25502621	.	G	GA	885.78	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-4.382;DP=694;FS=1.616;HRun=2;HaplotypeScore=66.2000;InbreedingCoeff=0.9958;MQ=86.80;MQ0=0;MQRankSum=-2.464;QD=35.43;ReadPosRankSum=0.541;VQSLOD=4.0601;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:72.19:0,72,862	0/0:18,0:18:54.16:0,54,659	0/0:21,0:21:51.04:0,51,591	0/0:25,0:25:36.30:0,36,688	0/0:27,0:27:81.25:0,81,1003	0/0:29,0:29:84.26:0,84,1041	0/0:16,0:16:48.14:0,48,583	0/0:28,0:28:78.24:0,78,957	0/0:23,0:23:69.20:0,69,841	0/0:27,0:27:75.24:0,75,929	0/0:25,0:25:69.22:0,69,854	0/0:33,0:33:90.25:0,90,1079	0/0:28,0:28:84.26:0,84,1029	0/0:42,0:42:99:0,120,1461	0/0:30,0:30:84.26:0,84,1041	0/0:26,0:26:78.23:0,78,954	1/1:4,21:25:72.20:981,72,0	0/0:17,0:17:48.15:0,48,594	0/0:27,0:27:78.22:0,78,933	0/0:28,0:28:75.11:0,75,887	0/0:19,0:19:57.17:0,57,695	0/0:26,0:26:75.22:0,75,909	0/0:27,0:27:75.21:0,75,903	0/0:20,0:20:60.17:0,60,730	0/0:20,0:20:57.17:0,57,694	0/0:26,0:26:78.24:0,78,954	0/0:27,0:27:75.24:0,75,929	0/0:7,0:7:21.02:0,21,231
chr10	25502711	.	AG	A	1358.08	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.205;DP=639;FS=13.316;HRun=6;HaplotypeScore=69.8519;InbreedingCoeff=0.9949;MQ=87.27;MQ0=0;MQRankSum=-1.883;QD=25.62;ReadPosRankSum=-2.801;VQSLOD=1.7600;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:90.27:0,90,1163	0/0:9,0:9:21.04:0,21,259	0/0:27,0:27:47.70:0,48,589	0/0:28,0:27:52.15:0,52,600	0/0:28,0:28:69.22:0,69,908	0/0:34,0:34:96.30:0,96,1247	0/0:14,0:14:39.13:0,39,513	1/1:2,22:24:60.15:645,60,0	0/0:27,0:27:72.22:0,72,932	0/0:27,0:27:66.20:0,66,854	0/0:21,0:21:57.17:0,57,734	0/0:27,0:27:78.25:0,78,1013	0/0:21,0:21:60.20:0,60,790	0/0:15,0:15:39.10:0,39,479	0/0:24,0:24:60.18:0,60,776	0/0:22,0:22:60.18:0,60,772	1/1:3,26:29:78.18:835,78,0	0/0:14,0:14:42.14:0,42,552	0/0:29,1:30:43.44:0,43,897	0/0:22,0:22:60.20:0,60,789	0/0:33,0:33:90.29:0,90,1183	0/0:22,0:22:63.19:0,63,814	0/0:15,0:15:30.08:0,30,380	0/0:11,0:11:27.09:0,27,355	0/0:20,0:20:54.15:0,54,692	0/0:33,0:33:96.30:0,96,1249	0/0:21,0:20:60.19:0,60,786	0/0:7,0:7:21.07:0,21,276
chr10	25502750	.	AATGG	A	7396.94	PASS	AB=0.778;AC=47;AF=0.940;AN=50;BaseQRankSum=-0.994;DP=660;FS=11.595;HRun=0;HaplotypeScore=111.1482;InbreedingCoeff=0.1673;MQ=64.99;MQ0=14;MQRankSum=2.566;QD=13.30;ReadPosRankSum=1.018;VQSLOD=3.4013;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:24,14:36:23.76:363,24,0	1/1:5,3:8:6.02:91,6,0	./.	./.	1/1:18,9:27:21.07:319,21,0	1/1:22,11:32:27.09:410,27,0	1/1:6,4:10:3.01:46,3,0	0/0:35,0:34:0:0,0,0	1/1:11,9:20:21.07:319,21,0	1/1:22,5:27:12.02:157,12,0	1/1:14,4:18:12.04:182,12,0	1/1:19,10:29:7.05:319,7,0	1/1:15,12:27:36.12:541,36,0	1/1:8,11:19:30.10:455,30,0	1/1:15,13:28:30.10:455,30,0	1/1:9,13:22:24.08:364,24,0	1/1:23,11:34:22.18:572,22,0	0/1:10,4:14:52.80:167,0,53	1/1:17,2:19:9.03:137,9,0	1/1:16,10:26:24.08:358,24,0	1/1:23,12:35:27.09:410,27,0	1/1:12,6:17:15.05:228,15,0	1/1:7,8:15:15.01:202,15,0	1/1:5,9:13:15.05:228,15,0	1/1:12,11:23:24.08:364,24,0	1/1:20,8:27:21.07:317,21,0	1/1:18,6:23:27.08:392,27,0	./.
chr10	25503112	.	CA	C	11651.73	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-5.949;DP=597;FS=1.768;HRun=9;HaplotypeScore=67.3002;InbreedingCoeff=0.9907;MQ=77.50;MQ0=0;MQRankSum=-2.652;QD=24.53;ReadPosRankSum=3.430;VQSLOD=5.6232;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:2,0:29:82.66:0,83,432	1/1:0,10:10:30.02:275,30,0	0/0:14,0:14:24.07:0,24,274	0/0:13,0:13:18.52:0,19,208	1/1:1,25:26:74.94:670,75,0	1/1:1,27:28:68.83:631,69,0	1/1:0,17:17:45.02:412,45,0	0/0:3,0:22:60.28:0,60,345	1/1:1,13:14:33.01:302,33,0	1/1:6,32:38:96.04:875,96,0	1/1:2,20:22:60.02:545,60,0	1/1:0,22:22:63.03:577,63,0	1/1:0,22:22:66.04:604,66,0	1/1:0,24:24:72.04:659,72,0	0/0:24,0:24:72.21:0,72,831	1/1:1,19:20:57.03:522,57,0	0/0:19,0:18:51.15:0,51,589	1/1:1,8:9:20.85:192,21,0	1/1:5,17:22:50.97:457,51,0	1/1:2,33:35:92.03:879,92,0	1/1:1,12:13:30.01:275,30,0	1/1:2,18:20:48.02:439,48,0	1/1:2,21:23:63.03:577,63,0	1/1:3,17:20:51.03:467,51,0	1/1:4,29:33:87.03:796,87,0	1/1:0,21:21:63:566,63,0	1/1:0,32:32:90.05:823,90,0	1/1:0,4:4:12.01:110,12,0
chr10	25503165	.	T	TA	837.19	PASS	AB=0.636;AC=3;AF=0.054;AN=56;BaseQRankSum=-4.015;DP=588;FS=3.264;HRun=9;HaplotypeScore=82.2433;InbreedingCoeff=0.5509;MQ=73.48;MQ0=0;MQRankSum=-0.739;QD=18.60;ReadPosRankSum=-4.208;VQSLOD=2.5829;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:62.89:0,63,538	0/0:5,0:5:8.99:0,9,78	0/0:16,0:15:13:0,13,173	0/0:10,0:10:15.87:0,16,132	0/0:27,0:27:74.96:0,75,647	0/0:27,0:27:65.98:0,66,573	0/0:22,0:22:53.95:0,54,462	1/1:8,22:31:69.02:744,69,0	0/0:13,0:13:32.99:0,33,287	0/0:35,0:35:89.97:0,90,781	0/0:15,1:17:4.86:0,5,259	0/0:24,0:24:65.98:0,66,573	0/0:29,0:29:62.97:0,63,547	0/0:21,0:22:50.01:0,50,422	0/0:21,0:21:62.99:0,63,547	0/0:24,0:24:65.99:0,66,573	0/1:6,8:13:70.96:199,0,71	0/0:7,0:7:17.99:0,18,156	0/0:22,0:22:62.99:0,63,547	0/0:32,0:32:80.97:0,81,703	0/0:15,0:15:38.95:0,39,332	0/0:14,0:14:32.98:0,33,286	0/0:25,0:25:59.96:0,60,516	0/0:16,0:16:44.97:0,45,385	0/0:25,1:26:38.84:0,39,566	0/0:23,0:23:62.97:0,63,544	0/0:36,0:36:83.97:0,84,729	0/0:8,0:8:21:0,21,182
chr10	25503193	.	C	CT	444.42	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-0.651;DP=613;FS=6.088;HRun=1;HaplotypeScore=66.9021;InbreedingCoeff=0.9763;MQ=85.53;MQ0=0;MQRankSum=-3.643;QD=27.78;ReadPosRankSum=0.002;VQSLOD=3.0541;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:72.23:0,72,935	0/0:6,0:6:18.06:0,18,234	0/0:25,0:24:45.26:0,45,780	0/0:15,0:15:42.08:0,42,511	0/0:25,0:25:72.23:0,72,934	0/0:25,0:25:66.21:0,66,857	0/0:22,0:22:66.20:0,66,842	0/0:30,0:30:87.28:0,87,1119	0/0:20,0:20:57.17:0,57,726	0/0:40,0:40:99:0,117,1520	0/0:17,0:17:51.17:0,51,662	0/0:24,0:24:66.20:0,66,841	0/0:24,0:24:69.22:0,69,895	0/0:21,0:21:63.17:0,63,789	0/0:26,0:26:75.24:0,75,974	0/0:20,0:20:60.19:0,60,777	1/1:0,16:16:36.12:539,36,0	0/0:7,0:7:18.06:0,18,233	0/0:30,0:30:81.25:0,81,1038	0/0:33,0:33:99:0,99,1284	0/0:17,0:17:48.16:0,48,622	0/0:18,0:18:54.18:0,54,701	0/0:27,0:27:78.25:0,78,1012	0/0:14,0:14:39.13:0,39,506	0/0:28,0:28:78.23:0,78,997	0/0:19,0:19:54.18:0,54,701	0/0:33,0:33:96.30:0,96,1232	0/0:6,0:6:18.06:0,18,233
chr10	25504852	.	G	GA	1163.32	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=6.544;DP=551;FS=0.000;HRun=8;HaplotypeScore=57.2837;InbreedingCoeff=0.7942;MQ=77.08;MQ0=1;MQRankSum=1.069;QD=17.11;ReadPosRankSum=-1.441;VQSLOD=3.1273;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,30:33:81.24:935,81,0	0/0:5,0:5:15.01:0,15,137	0/0:14,0:14:20:0,20,163	0/1:12,0:12:8.77:9,0,79	0/0:20,0:20:48:0,48,434	0/0:26,0:26:72.03:0,72,659	0/0:23,0:23:60.02:0,60,549	1/1:2,1:23:52.85:347,53,0	0/0:15,0:15:33.01:0,33,302	0/0:18,0:18:41.99:0,42,377	0/0:17,0:17:48.02:0,48,439	0/0:21,0:21:60.03:0,60,549	0/0:20,0:20:48.02:0,48,439	0/0:21,0:21:57.01:0,57,516	0/0:27,0:27:72.01:0,72,650	0/0:17,0:17:48.03:0,48,439	0/0:23,0:23:60.01:0,60,543	0/0:21,0:21:53.46:0,53,463	0/0:19,0:19:54.03:0,54,494	0/0:19,0:19:54.02:0,54,494	0/0:23,0:23:59.02:0,59,520	0/0:17,0:17:39.01:0,39,357	0/0:14,0:14:39.02:0,39,357	0/0:22,0:22:51.01:0,51,467	0/0:24,0:24:66.03:0,66,604	0/0:19,0:19:51.03:0,51,467	0/0:22,0:22:50.94:0,51,451	0/0:15,0:15:42.02:0,42,384
chr10	25504938	.	GA	G	486.85	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.462;DP=514;FS=1.935;HRun=7;HaplotypeScore=51.2583;InbreedingCoeff=0.9277;MQ=75.30;MQ0=0;MQRankSum=0.196;QD=19.47;ReadPosRankSum=-2.945;VQSLOD=2.6002;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:87.17:0,87,1073	0/0:6,0:6:9.03:0,9,113	0/0:15,0:15:27.08:0,27,327	0/0:9,0:8:15.02:0,15,179	0/0:23,0:23:63.20:0,63,793	0/0:20,0:20:51.16:0,51,642	0/0:15,0:15:33.11:0,33,415	1/1:6,19:25:57.13:582,57,0	0/0:20,0:20:60.19:0,60,755	0/0:22,0:22:60.18:0,60,742	0/0:18,0:18:54.13:0,54,661	0/0:17,0:17:48.15:0,48,604	0/0:10,0:10:30.10:0,30,377	0/0:17,0:17:42.13:0,42,523	0/0:20,0:20:57.15:0,57,682	0/0:13,0:13:36.07:0,36,435	0/0:19,0:19:54.17:0,54,676	0/0:20,0:20:54.17:0,54,679	0/0:26,0:26:72.19:0,72,888	0/0:19,0:19:51.15:0,51,629	0/0:23,0:23:66.21:0,66,830	0/0:16,0:16:42.13:0,42,528	0/0:20,0:20:54.16:0,54,668	0/0:10,0:10:27.09:0,27,340	0/0:20,0:20:60.19:0,60,755	0/0:16,0:16:39.07:0,39,462	0/0:32,0:32:93.30:0,93,1168	0/0:11,0:11:27.09:0,27,340
chr10	25505086	.	G	GGTGTGTGTGTGT	9952.62	PASS	AB=1.000;AC=48;AF=0.857;AN=56;BaseQRankSum=0.140;DP=513;FS=11.742;HRun=0;HaplotypeScore=210.0550;InbreedingCoeff=0.3741;MQ=51.20;MQ0=8;MQRankSum=-3.836;QD=21.54;ReadPosRankSum=-1.963;VQSLOD=2.8002;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:32,0:31:23.20:333,0,23	1/1:7,1:7:3.01:175,3,0	0/0:16,0:7:9:0,9,162	0/0:17,0:10:3.01:0,3,54	1/1:17,1:21:5.90:291,6,0	1/1:16,0:21:6.02:290,6,0	1/1:23,0:22:5.98:46,6,0	1/1:22,0:22:29.38:662,29,0	1/1:21,2:23:12.04:588,12,0	1/1:19,0:19:34.02:1278,34,0	1/1:9,2:12:3.01:175,3,0	1/1:14,2:16:6.02:259,6,0	1/1:12,0:12:3.01:87,3,0	1/1:15,1:17:3.44:175,3,0	0/0:15,0:17:33.11:0,33,1097	1/1:14,3:18:9.50:525,10,0	1/1:10,1:11:6.02:213,6,0	1/1:20,0:21:17.99:600,18,0	1/1:18,0:18:38.48:1236,38,0	0/1:18,0:18:0:0,0,0	1/1:21,0:21:6.01:91,6,0	1/1:15,1:16:2.40:173,2,0	1/1:15,0:15:3.48:175,3,0	1/1:19,5:24:9.03:465,9,0	1/1:18,0:20:3.01:117,3,0	1/1:20,0:20:19.87:785,20,0	1/1:19,2:27:21.02:1004,21,0	1/1:6,0:6:9.01:210,9,0
chr10	25505248	.	C	CG	12380.35	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-8.906;DP=538;FS=0.000;HRun=6;HaplotypeScore=53.3267;InbreedingCoeff=0.9969;MQ=76.99;MQ0=0;MQRankSum=-3.351;QD=29.76;ReadPosRankSum=4.140;VQSLOD=5.1789;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:90.05:0,90,885	1/1:1,9:10:27.09:339,27,0	0/0:15,0:15:29.13:0,29,237	0/0:9,0:9:17.69:0,18,149	1/1:2,19:21:57.14:699,57,0	1/1:2,16:18:45.14:558,45,0	1/1:3,17:20:45.14:566,45,0	0/0:23,0:23:53.12:0,53,511	1/1:0,23:23:60.19:755,60,0	1/1:4,15:19:39.11:475,39,0	1/1:1,10:11:30.01:355,30,0	1/1:2,26:28:69.22:868,69,0	1/1:3,17:20:48.62:602,49,0	1/1:4,16:20:39.12:488,39,0	0/0:22,0:22:57.04:0,57,549	1/1:3,17:20:54.09:657,54,0	0/0:22,0:22:63.08:0,63,624	1/1:1,11:12:30.10:377,30,0	1/1:3,12:15:36.10:438,36,0	1/1:4,15:19:35.90:418,36,0	1/1:3,14:17:27.09:340,27,0	1/1:3,23:26:69.11:844,69,0	1/1:4,17:21:42.12:528,42,0	1/1:1,19:20:54.17:679,54,0	1/1:1,17:18:45.14:566,45,0	1/1:4,30:34:87.18:1044,87,0	1/1:0,16:16:39.12:483,39,0	1/1:0,8:8:24.08:302,24,0
chr10	25508302	.	TA	T	16978.19	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=18.050;DP=733;FS=3.187;HRun=4;HaplotypeScore=147.2417;InbreedingCoeff=0.9620;MQ=87.16;MQ0=0;MQRankSum=-4.726;QD=31.10;ReadPosRankSum=3.688;VQSLOD=3.3499;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,153,2100	1/1:1,6:7:14.91:175,15,0	0/0:28,0:28:75.25:0,75,1034	0/0:28,0:28:40.78:0,41,840	1/1:0,20:20:57.17:665,57,0	1/1:2,29:31:78.23:911,78,0	1/1:1,29:30:75.22:876,75,0	0/0:22,0:22:63.19:0,63,839	1/1:2,24:26:69.20:802,69,0	1/1:2,33:35:99:1148,99,0	1/1:1,19:20:57.17:663,57,0	1/1:3,27:30:81.24:946,81,0	1/1:0,29:29:87.26:1015,87,0	1/1:1,28:29:75.22:876,75,0	0/0:24,0:24:66.22:0,66,924	1/1:2,30:32:84.25:981,84,0	0/0:34,0:34:99:0,99,1382	1/1:2,12:14:27.50:377,28,0	1/1:1,26:27:78.23:911,78,0	1/1:3,19:22:54.16:627,54,0	1/1:1,46:47:99:1435,123,0	1/1:2,22:24:66.20:770,66,0	1/1:1,19:20:50.98:595,51,0	1/1:1,31:32:90.27:1051,90,0	1/1:2,21:23:57.17:665,57,0	1/1:2,21:23:63.19:736,63,0	1/1:2,21:23:63.15:721,63,0	1/1:0,2:2:3.01:35,3,0
chr10	25509150	.	AT	A	1373.53	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.086;DP=659;FS=3.111;HRun=1;HaplotypeScore=72.4892;InbreedingCoeff=0.9987;MQ=83.92;MQ0=0;MQRankSum=-1.345;QD=39.24;ReadPosRankSum=2.672;VQSLOD=4.5011;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,111,1751	0/0:11,0:11:33.11:0,33,527	0/0:21,0:21:60.20:0,60,911	0/0:18,0:18:51.64:0,52,805	0/0:30,0:30:87.25:0,87,1316	0/0:26,0:26:78.24:0,78,1195	0/0:17,0:17:51.17:0,51,813	0/0:26,0:26:78.26:0,78,1226	0/0:21,0:21:63.18:0,63,959	0/0:33,0:33:99:0,99,1583	0/0:21,0:21:63.21:0,63,1006	0/0:21,0:21:63.21:0,63,1007	0/0:23,0:23:63.21:0,63,1007	0/0:25,0:25:75.22:0,75,1149	0/0:20,0:20:60.20:0,60,959	0/0:25,0:25:75.24:0,75,1176	1/1:0,35:35:99:1468,105,0	0/0:17,0:17:45.15:0,45,718	0/0:28,0:28:84.29:0,84,1337	0/0:24,0:24:72.25:0,72,1146	0/0:30,0:30:90.31:0,90,1435	0/0:32,0:32:96.31:0,96,1508	0/0:19,0:19:57.19:0,57,910	0/0:16,0:16:48.12:0,48,739	0/0:17,0:17:51.17:0,51,813	0/0:25,0:25:75.26:0,75,1199	0/0:32,0:32:96.31:0,96,1502	0/0:9,0:9:27.09:0,27,431
chr10	25509712	.	T	TA	16122.25	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-11.901;DP=642;FS=7.507;HRun=7;HaplotypeScore=52.5845;InbreedingCoeff=0.9984;MQ=70.75;MQ0=0;MQRankSum=-1.776;QD=30.48;ReadPosRankSum=0.892;VQSLOD=5.0973;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:66.10:0,66,637	1/1:1,8:9:24.07:290,24,0	0/0:12,0:12:24.03:0,24,229	0/0:12,0:12:24.03:0,24,229	1/1:5,31:36:87.27:1051,87,0	1/1:0,22:22:60.18:725,60,0	1/1:2,18:20:42.13:507,42,0	1/1:7,15:22:45.14:543,45,0	1/1:3,29:32:72.22:870,72,0	1/1:2,17:19:54.17:650,54,0	1/1:3,27:30:81.21:962,81,0	1/1:0,24:24:63.19:761,63,0	1/1:5,29:35:87.09:1013,87,0	1/1:1,19:20:57.17:689,57,0	0/0:32,0:32:93.15:0,93,898	1/1:3,18:21:54.17:652,54,0	0/0:29,0:29:81.09:0,81,768	1/1:5,10:15:36.10:422,36,0	1/1:4,9:13:30.09:361,30,0	1/1:3,25:28:72.15:838,72,0	1/1:1,24:25:66.20:797,66,0	1/1:2,16:18:42.13:507,42,0	1/1:4,19:23:60.18:717,60,0	1/1:2,13:15:36.11:435,36,0	1/1:1,28:29:84.26:1014,84,0	1/1:5,30:35:90.28:1087,90,0	1/1:4,20:23:63.19:760,63,0	1/1:0,14:14:39.12:471,39,0
chr10	25511468	.	GCACACA	G	7809.02	PASS	AC=42;AF=0.778;AN=54;BaseQRankSum=2.335;DP=570;FS=3.806;HRun=0;HaplotypeScore=141.1775;InbreedingCoeff=0.7867;MQ=56.98;MQ0=8;MQRankSum=-5.464;QD=18.59;ReadPosRankSum=0.486;VQSLOD=4.3095;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:41:14.86:0,15,244	1/1:4,0:4:5.99:84,6,0	0/0:28,0:20:6.02:0,6,99	0/0:23,0:15:3.01:0,3,43	1/1:7,16:27:30.06:510,30,0	1/1:9,9:20:17.96:324,18,0	1/1:15,12:27:12.04:240,12,0	0/0:16,0:14:6.01:0,6,65	1/1:10,8:18:22.37:473,22,0	1/1:12,10:24:28.12:482,28,0	1/1:7,11:19:26.94:559,27,0	1/1:9,10:19:21.07:435,21,0	1/1:10,14:26:33.11:623,33,0	1/1:5,7:13:9.03:166,9,0	0/0:15,0:17:26.30:0,26,764	1/1:6,8:17:21.07:374,21,0	0/0:8,0:24:24.67:0,25,346	1/1:2,4:6:2.97:62,3,0	1/1:15,1:17:8.43:116,8,0	1/1:8,13:25:24.08:456,24,0	1/1:20,9:28:3.01:53,3,0	1/1:10,11:23:27.98:521,28,0	1/1:6,9:17:27.09:508,27,0	1/1:17,10:27:14.80:311,15,0	1/1:8,15:25:20.51:568,21,0	1/1:6,6:12:16.29:301,16,0	1/1:12,10:24:33.11:643,33,0	./.
chr10	25512030	.	CA	C	4142.43	PASS	AB=0.627;AC=37;AF=0.661;AN=56;BaseQRankSum=3.530;DP=473;FS=0.500;HRun=14;HaplotypeScore=55.4452;InbreedingCoeff=0.0904;MQ=75.06;MQ0=1;MQRankSum=-1.720;QD=10.28;ReadPosRankSum=2.871;VQSLOD=3.1174;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:12:23.86:0,24,210	0/1:2,8:10:1.09:138,0,1	0/0:22,0:13:1.42:0,1,40	0/0:20,0:16:6.52:0,7,59	0/1:12,18:33:21:284,0,21	1/1:2,18:21:17.17:332,17,0	0/1:4,8:13:7.07:102,0,7	1/1:8,16:25:49.55:331,50,0	1/1:0,9:10:25.74:170,26,0	0/1:6,12:20:59.67:207,0,60	0/1:6,6:12:48.19:96,0,48	1/1:6,11:17:26.72:185,27,0	1/1:5,6:11:11.86:82,12,0	1/1:1,3:4:5.95:41,6,0	0/0:14,0:14:26.77:0,27,235	0/1:7,8:17:0.11:128,0,0	0/1:19,2:24:13.13:13,0,336	0/1:4,7:12:35.73:83,0,36	1/1:5,7:12:20.81:144,21,0	0/1:8,16:25:27.88:258,0,28	1/1:2,5:8:10.95:68,11,0	1/1:4,10:14:26.69:185,27,0	1/1:6,21:29:10.87:347,11,0	0/1:1,5:6:9.98:85,0,10	0/1:12,13:25:45.63:166,0,46	1/1:11,9:20:3.86:163,4,0	1/1:7,15:23:52.53:351,53,0	1/1:3,9:12:26.77:185,27,0
chr10	25513120	.	CA	C	20216.94	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-1.154;DP=646;FS=1.531;HRun=2;HaplotypeScore=68.5791;InbreedingCoeff=0.9881;MQ=90.79;MQ0=0;MQRankSum=-8.457;QD=35.34;ReadPosRankSum=4.747;VQSLOD=5.2239;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,23:23:63.20:818,63,0	1/1:0,16:16:48.16:623,48,0	0/0:22,0:22:22.82:0,23,773	0/0:27,0:27:77.99:0,78,1019	1/1:0,34:34:90.29:1169,90,0	1/1:0,28:28:78.25:1013,78,0	1/1:0,17:17:48.16:623,48,0	1/1:1,31:32:90.25:1125,90,0	1/1:0,15:15:45.15:584,45,0	1/1:1,24:25:69.22:896,69,0	1/1:0,19:19:54.18:701,54,0	1/1:1,21:22:54.18:701,54,0	1/1:0,21:21:60.20:779,60,0	1/1:0,23:23:60.20:779,60,0	0/0:25,0:25:75.25:0,75,1124	1/1:0,23:23:60.20:779,60,0	1/1:0,20:20:51.17:662,51,0	1/1:0,15:15:39.13:506,39,0	1/1:0,16:16:48.16:623,48,0	1/1:1,41:42:99:1479,114,0	1/1:0,16:16:45.15:584,45,0	1/1:0,20:20:57.19:740,57,0	1/1:0,21:21:54.04:701,54,0	1/1:0,22:22:60.20:779,60,0	1/1:0,24:24:69.22:895,69,0	1/1:2,26:28:78.22:981,78,0	1/1:0,44:44:99:1519,117,0	1/1:0,6:6:12.04:156,12,0
chr10	25514189	.	T	TA	16594.71	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-10.352;DP=645;FS=0.000;HRun=7;HaplotypeScore=61.0144;InbreedingCoeff=0.9346;MQ=86.22;MQ0=0;MQRankSum=-6.720;QD=29.27;ReadPosRankSum=3.806;VQSLOD=5.2268;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,37:42:99:1288,108,0	1/1:0,7:7:15.05:181,15,0	0/0:22,0:22:41.72:0,42,366	0/0:27,0:25:59.93:0,60,540	1/1:6,25:30:72.11:833,72,0	1/1:1,22:23:48.15:580,48,0	1/1:5,21:26:63.19:761,63,0	1/1:12,27:39:49.21:829,49,0	1/1:1,23:24:60.18:725,60,0	1/1:5,22:27:70.44:821,70,0	1/1:2,24:26:69.13:814,69,0	1/1:3,20:23:54.17:652,54,0	1/1:2,9:11:24.07:288,24,0	1/1:1,24:25:69.21:833,69,0	0/0:29,0:29:72.09:0,72,685	1/1:2,24:26:72.22:868,72,0	1/1:1,23:24:57.17:689,57,0	1/1:1,13:14:36.11:435,36,0	1/1:4,21:25:66.11:751,66,0	1/1:3,24:27:69.12:800,69,0	1/1:3,23:26:66.20:797,66,0	1/1:1,19:20:54.12:636,54,0	1/1:3,19:22:54.17:652,54,0	1/1:1,11:12:30.09:362,30,0	1/1:1,16:17:45.14:544,45,0	1/1:4,21:25:63.16:735,63,0	1/1:3,20:23:57.17:684,57,0	1/1:0,1:1:3.01:36,3,0
chr10	25515058	.	T	TACACACACACAA	19866.29	PASS	AB=0.779;AC=47;AF=0.839;AN=56;BaseQRankSum=-3.184;DP=495;FS=10.006;HRun=0;HaplotypeScore=144.3225;InbreedingCoeff=0.5606;MQ=56.25;MQ0=7;MQRankSum=-2.555;QD=45.88;ReadPosRankSum=-3.220;VQSLOD=2.8711;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:16,0:26:24.32:107,0,24	1/1:4,5:10:18.02:863,18,0	0/0:26,0:13:15.04:0,15,269	0/0:23,0:14:26.95:0,27,279	1/1:8,18:26:50.83:1430,51,0	1/1:7,9:16:23.99:791,24,0	1/1:8,11:19:18.02:640,18,0	0/1:35,0:35:99:503,0,131	1/1:2,7:9:9.50:539,10,0	1/1:7,10:17:36.06:1144,36,0	1/1:9,15:24:50.91:1610,51,0	1/1:7,1:9:14.92:286,15,0	1/1:4,3:8:12.04:577,12,0	1/1:6,8:14:17.97:615,18,0	0/0:13,0:13:30.09:0,30,916	1/1:3,12:16:23.97:1295,24,0	1/1:9,0:17:12.87:308,13,0	0/1:6,8:15:9.80:489,0,10	1/1:11,9:20:40.32:1299,40,0	1/1:18,1:19:30.29:502,30,0	1/1:13,0:13:20.92:273,21,0	1/1:7,14:21:27.05:1394,27,0	1/1:5,14:19:21.08:641,21,0	1/1:5,10:15:8.94:219,9,0	1/1:8,9:18:27.05:953,27,0	1/1:14,1:15:35.70:1282,36,0	1/1:6,11:18:27.09:1548,27,0	1/1:5,2:12:12.01:560,12,0
chr10	25515060	.	C	CACACACACAA	15450.14	PASS	AB=0.958;AC=40;AF=0.714;AN=56;BaseQRankSum=0.811;DP=495;FS=0.000;HRun=0;HaplotypeScore=144.4691;InbreedingCoeff=0.1224;MQ=51.74;MQ0=10;MQRankSum=-1.666;QD=35.85;ReadPosRankSum=2.549;VQSLOD=4.5672;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:25:15.66:183,0,16	1/1:10,0:10:1.80:629,2,0	0/0:25,0:10:15.04:0,15,288	0/0:26,0:14:33:0,33,358	1/1:29,1:30:52.88:1153,53,0	0/1:15,1:16:10.21:560,0,10	0/1:19,0:19:7.10:407,0,7	0/1:38,0:37:99:509,0,199	1/1:8,0:8:9.50:399,10,0	1/1:15,1:16:33.06:845,33,0	1/1:24,1:25:19.40:1181,19,0	0/1:9,0:9:1.30:205,0,1	1/1:8,0:8:12.04:433,12,0	0/1:15,0:15:16.22:383,0,16	0/0:13,0:13:30.09:0,30,831	1/1:15,0:15:22.32:933,22,0	1/1:16,0:16:7.46:320,7,0	0/1:14,0:14:11.59:349,0,12	1/1:21,0:18:31.82:975,32,0	1/1:8,12:21:1.44:555,1,0	1/1:13,0:12:5.19:174,5,0	1/1:18,1:19:24.08:1083,24,0	1/1:17,0:17:19.12:595,19,0	0/1:14,0:14:21.75:124,0,22	1/1:15,2:17:23.52:770,24,0	0/1:7,8:16:5.20:1070,0,5	1/1:15,1:16:27.09:1210,27,0	0/1:12,0:12:1.87:404,0,2
chr10	25515470	.	AGATGAT	A	665.13	PASS	AB=1.000;AC=27;AF=0.482;AN=56;BaseQRankSum=0.148;DP=309;FS=37.894;HRun=0;HaplotypeScore=72.3016;InbreedingCoeff=0.3157;MQ=72.33;MQ0=8;MQRankSum=-3.513;QD=3.80;ReadPosRankSum=4.759;VQSLOD=-0.0975;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:19:41.76:0,42,616	0/0:3,0:3:3.01:0,3,47	0/0:24,0:18:30.04:0,30,538	0/0:8,0:7:15.05:0,15,339	0/1:13,0:12:7.54:8,0,64	1/1:7,0:6:1.36:3,1,0	1/1:8,0:8:4.43:10,4,0	1/1:4,16:20:48.10:708,48,0	0/0:10,0:10:6.02:0,6,82	0/0:9,0:8:1.62:0,2,54	1/1:11,0:10:3.64:9,4,0	0/1:15,0:14:1.84:2,0,74	1/1:6,0:6:1.70:4,2,0	0/0:6,0:6:1.41:0,1,64	0/0:9,0:9:21.07:0,21,326	1/1:7,0:6:1.37:3,1,0	1/1:18,0:17:6.75:16,7,0	1/1:3,0:3:1.77:4,2,0	1/1:10,0:10:3.30:7,3,0	0/1:8,0:7:1.95:2,0,32	0/0:9,0:9:1:0,1,34	0/1:10,0:10:8.92:9,0,30	1/1:17,0:15:5.87:14,6,0	1/1:10,0:10:3.65:9,4,0	0/0:15,0:14:0.62:0,1,57	0/0:15,0:14:2.43:0,2,27	0/1:12,0:12:4.56:5,0,17	0/0:5,0:4:5.48:0,5,67
chr10	25516845	.	CAA	C	8698.37	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=1.791;DP=565;FS=1.121;HRun=13;HaplotypeScore=111.2276;InbreedingCoeff=0.8513;MQ=66.00;MQ0=6;MQRankSum=1.108;QD=18.51;ReadPosRankSum=3.054;VQSLOD=4.2089;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:56.77:0,57,723	1/1:0,4:4:12.02:116,12,0	0/0:17,0:14:14.68:0,15,119	0/0:12,0:9:0.89:0,1,2	1/1:6,26:34:65.33:610,65,0	1/1:6,19:27:41.67:490,42,0	1/1:2,23:23:45.06:436,45,0	1/1:11,18:29:56.62:533,57,0	1/1:3,18:21:50.81:477,51,0	1/1:7,19:26:45.16:538,45,0	1/1:1,18:19:41.47:383,41,0	1/1:3,18:21:47.72:446,48,0	1/1:5,19:23:62.56:576,63,0	1/1:4,10:14:14.89:195,15,0	0/0:15,0:17:24:0,24,303	1/1:5,22:27:62.60:582,63,0	0/0:3,0:21:37.78:0,38,140	1/1:1,15:15:26.51:227,27,0	1/1:4,6:9:14.99:145,15,0	1/1:7,25:32:62.74:593,63,0	1/1:2,3:4:0.60:25,1,0	1/1:6,18:26:41.93:457,42,0	1/1:6,10:17:20.89:253,21,0	1/1:3,9:9:14.98:145,15,0	1/1:4,22:27:17.56:533,18,0	1/1:1,14:17:32.96:413,33,0	1/1:9,20:27:48.02:465,48,0	1/1:0,2:2:6.01:58,6,0
chr10	25516888	.	GAAGGAAGAAAGAAAGA	G	13640.89	PASS	AB=0.981;AC=39;AF=0.750;AN=52;BaseQRankSum=7.262;DP=551;FS=5.922;HRun=0;HaplotypeScore=331.1767;InbreedingCoeff=0.4636;MQ=39.77;MQ0=31;MQRankSum=-3.011;QD=29.98;ReadPosRankSum=0.804;VQSLOD=2.1579;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:38.16:0,38,573	1/1:7,3:10:29.85:627,30,0	./.	./.	1/1:28,1:28:71.18:681,71,0	1/1:22,4:26:74.88:1267,75,0	0/1:23,0:20:8.88:258,0,9	0/0:33,0:32:44.41:0,44,297	1/1:22,0:21:59.67:582,60,0	0/1:23,0:23:58.70:515,0,59	1/1:16,0:16:30.66:371,31,0	1/1:22,2:23:50.49:831,50,0	1/1:25,2:22:59.40:845,59,0	0/1:12,0:10:81.86:301,0,82	0/0:15,0:14:27.01:0,27,620	1/1:25,5:30:71.60:1210,72,0	0/0:23,0:19:27.94:0,28,937	1/1:12,0:10:17.92:183,18,0	1/1:17,0:13:19.10:203,19,0	1/1:26,4:29:78:1401,78,0	1/1:7,0:6:4.13:34,4,0	1/1:22,0:22:49.49:368,49,0	1/1:20,3:22:56.64:828,57,0	0/1:19,0:12:99:117,0,151	0/1:25,3:28:60.01:1090,0,60	1/1:21,0:19:56.86:678,57,0	1/1:28,2:28:83.63:1143,84,0	1/1:4,0:3:9:109,9,0
chr10	25517756	.	TTTC	T	139.82	PASS	AB=0.843;AC=3;AF=0.054;AN=56;BaseQRankSum=3.240;DP=230;FS=9.324;HRun=0;HaplotypeScore=38.0149;InbreedingCoeff=0.0620;MQ=61.29;MQ0=0;MQRankSum=-1.469;QD=3.78;ReadPosRankSum=-1.070;VQSLOD=-0.3104;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:39.13:0,39,641	0/0:4,0:4:12.03:0,12,175	0/0:5,0:4:12.01:0,12,227	0/0:2,0:2:6.02:0,6,108	0/0:11,0:11:17.73:0,18,425	0/0:5,0:5:15.05:0,15,277	0/0:2,0:2:6.02:0,6,92	0/0:31,0:31:93.29:0,93,1656	0/0:7,0:7:18.06:0,18,312	0/0:12,0:12:36.12:0,36,656	0/0:10,0:10:30.10:0,30,520	0/0:6,0:6:18.06:0,18,310	0/0:3,0:3:9.03:0,9,150	0/0:5,0:5:12.04:0,12,224	0/0:5,0:5:15.05:0,15,286	0/0:7,0:7:21.07:0,21,360	0/1:2,16:18:3.91:183,0,4	0/1:11,0:11:31.46:31,0,336	0/0:12,0:12:36.11:0,36,618	0/0:4,0:4:12.04:0,12,230	0/0:5,0:5:15.05:0,15,274	0/0:4,0:4:12.02:0,12,159	0/0:8,0:8:24.08:0,24,412	0/0:5,0:5:14.96:0,15,163	0/0:11,0:11:26.98:0,27,439	0/0:7,0:7:17.79:0,18,331	0/0:7,0:7:18.06:0,18,325	0/1:8,0:8:25.03:25,0,216
chr10	25519514	.	TTC	T	408.11	PASS	AB=0.949;AC=12;AF=0.231;AN=52;BaseQRankSum=3.818;DP=617;FS=3.443;HRun=0;HaplotypeScore=171.6306;InbreedingCoeff=-0.0017;MQ=48.38;MQ0=15;MQRankSum=1.575;QD=1.44;ReadPosRankSum=-4.360;VQSLOD=1.4868;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:38,0:38:65.39:114,0,65	0/0:13,0:13:4.46:0,4,43	./.	./.	0/1:22,0:21:10.65:11,0,43	0/0:25,0:24:0.54:0,1,94	0/1:30,0:29:0.30:0,0,20	1/1:24,0:22:6.07:116,6,0	0/0:25,0:24:16.29:0,16,116	0/0:33,0:31:25.66:0,26,310	0/0:16,0:15:0.73:0,1,44	0/1:27,0:27:17.65:18,0,103	0/0:21,0:21:32.02:0,32,322	0/0:25,0:25:14.20:0,14,169	0/1:9,20:28:0.25:177,0,0	0/0:22,0:21:4.91:0,5,65	1/1:23,0:22:1.70:7,2,0	0/1:16,0:14:2.76:3,0,100	0/0:21,0:21:23.28:0,23,152	0/0:18,0:16:11.16:0,11,119	0/0:12,0:11:2.91:0,3,25	0/0:21,0:20:9:0,9,97	0/0:22,0:22:11.54:0,12,99	0/1:47,0:45:62.49:64,0,62	0/1:26,0:26:23.99:24,0,34	0/0:22,0:21:3.12:0,3,182	0/0:28,0:26:1.36:0,1,152	0/0:10,0:10:6.26:0,6,77
chr10	25519541	.	TCA	T	3723.91	PASS	AB=0.869;AC=43;AF=0.768;AN=56;BaseQRankSum=5.403;DP=639;FS=6.169;HRun=0;HaplotypeScore=170.0253;InbreedingCoeff=0.5504;MQ=47.71;MQ0=18;MQRankSum=1.993;QD=7.00;ReadPosRankSum=2.103;VQSLOD=2.7717;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:56.89:0,57,548	1/1:12,1:14:20.98:149,21,0	0/0:11,0:2:5.91:0,6,38	0/0:12,0:2:5.85:0,6,36	1/1:23,6:30:50.08:357,50,0	1/1:14,2:27:15.13:109,15,0	1/1:27,4:31:23.96:168,24,0	0/0:26,0:22:37.31:0,37,262	1/1:12,0:24:5.64:28,6,0	1/1:24,3:29:44.18:332,44,0	1/1:10,2:14:18.02:117,18,0	1/1:19,4:25:26.96:326,27,0	0/1:23,0:23:42.06:134,0,42	1/1:17,5:22:20.99:139,21,0	0/1:33,0:31:44.51:45,0,109	1/1:9,0:21:5.47:48,5,0	1/1:11,1:14:1.39:91,1,0	1/1:15,3:17:20.59:155,21,0	1/1:12,0:12:8.78:52,9,0	1/1:16,0:18:3.46:26,3,0	1/1:13,0:13:6.01:40,6,0	0/0:14,0:21:2.98:0,3,22	0/1:7,0:20:0:1,0,0	1/1:28,15:41:53.31:479,53,0	1/1:20,10:32:53.57:380,54,0	1/1:13,5:19:29.32:230,29,0	1/1:19,4:22:29.17:180,29,0	1/1:6,4:11:20.98:139,21,0
chr10	25519689	.	A	AAT	29237.66	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-9.381;DP=669;FS=14.385;HRun=0;HaplotypeScore=67.2733;InbreedingCoeff=0.9960;MQ=74.66;MQ0=2;MQRankSum=-4.981;QD=47.70;ReadPosRankSum=3.352;VQSLOD=5.0438;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,36:38:87.30:1629,87,0	1/1:0,12:12:36.12:670,36,0	0/0:9,0:9:27.07:0,27,369	0/0:16,0:16:39.12:0,39,534	1/1:3,39:43:99:2058,111,0	1/1:0,17:17:42.14:786,42,0	1/1:1,18:19:54.19:1011,54,0	1/1:2,30:32:84.23:1481,84,0	1/1:1,22:23:57.20:1067,57,0	1/1:1,32:33:96.33:1786,96,0	1/1:1,17:18:48.16:879,48,0	1/1:3,27:29:72.25:1329,72,0	1/1:1,23:24:66.23:1236,66,0	1/1:0,25:25:60.21:1116,60,0	0/0:31,0:31:78.25:0,78,1129	1/1:1,16:18:30.10:561,30,0	1/1:1,23:24:66.23:1215,66,0	1/1:2,13:15:17.32:599,17,0	1/1:1,13:15:39.05:620,39,0	1/1:1,33:33:87.23:1587,87,0	1/1:2,21:23:57.20:1067,57,0	1/1:3,28:31:81.28:1517,81,0	1/1:0,25:25:66.23:1236,66,0	1/1:0,21:21:57.20:1067,57,0	1/1:0,29:29:78.27:1461,78,0	1/1:0,19:19:57.20:1068,57,0	1/1:2,24:26:66.23:1235,66,0	1/1:0,19:19:51.17:955,51,0
chr10	25519839	.	G	GAA	27151.06	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-10.254;DP=599;FS=1.618;HRun=1;HaplotypeScore=65.5363;InbreedingCoeff=0.9869;MQ=87.11;MQ0=0;MQRankSum=-8.076;QD=51.13;ReadPosRankSum=3.054;VQSLOD=4.9194;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,17:19:48.13:890,48,0	1/1:0,12:12:30.10:580,30,0	0/0:20,0:20:56.93:0,57,833	0/0:21,0:21:51.57:0,52,706	1/1:1,32:33:96.25:1776,96,0	1/1:1,20:22:57.20:1101,57,0	1/1:1,13:14:30.10:577,30,0	1/1:0,32:33:99:1776,99,0	1/1:0,16:17:42.14:806,42,0	1/1:1,38:39:99:2178,114,0	1/1:1,26:27:78.19:1431,78,0	1/1:0,16:16:42.14:811,42,0	1/1:1,28:29:75.26:1446,75,0	1/1:1,11:12:33.11:638,33,0	0/0:27,0:27:81.26:0,81,1218	1/1:0,16:17:42.14:812,42,0	1/1:5,18:23:63.19:1149,63,0	1/1:1,13:14:39.13:753,39,0	1/1:2,9:11:14.11:495,14,0	1/1:0,28:29:84.23:1584,84,0	1/1:0,12:12:36.12:696,36,0	1/1:0,22:22:60.21:1159,60,0	1/1:1,23:25:54.14:1006,54,0	1/1:0,13:13:39.13:754,39,0	1/1:1,29:30:78.14:1389,78,0	1/1:0,23:23:66.23:1275,66,0	1/1:1,32:33:93.32:1780,93,0	1/1:0,6:6:15.05:290,15,0
chr10	25520361	.	TAC	T	216.25	PASS	AC=26;AF=0.722;AN=36;BaseQRankSum=2.523;DP=494;FS=1.976;HRun=0;HaplotypeScore=102.2859;InbreedingCoeff=0.3953;MQ=48.46;MQ0=28;MQRankSum=-3.185;QD=0.84;ReadPosRankSum=2.013;VQSLOD=1.6882;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:21,6:25:2.94:31,3,0	./.	./.	./.	1/1:24,0:24:0.47:1,0,0	1/1:25,0:24:3.31:15,3,0	./.	0/0:17,0:17:5.81:0,6,32	1/1:16,0:16:5.72:29,6,0	0/0:26,0:24:0:0,0,0	./.	1/1:19,0:18:11.36:56,11,0	1/1:16,0:16:5.68:28,6,0	./.	0/0:11,0:11:6.02:0,6,82	1/1:13,0:13:5.68:28,6,0	0/0:16,0:16:0.09:0,0,26	./.	./.	1/1:20,0:19:3.31:15,3,0	./.	1/1:19,0:19:3.31:14,3,0	1/1:17,0:16:0.73:1,1,0	0/0:20,0:19:0.13:0,0,1	1/1:18,0:17:3.31:15,3,0	1/1:20,0:17:5.78:32,6,0	1/1:21,0:21:11.36:56,11,0	./.
chr10	25520397	.	CACACACACACACACAT	C	5379.89	PASS	AB=0.978;AC=45;AF=0.804;AN=56;BaseQRankSum=2.538;DP=511;FS=10.100;HRun=0;HaplotypeScore=170.5746;InbreedingCoeff=0.4210;MQ=48.18;MQ0=30;MQRankSum=0.152;QD=12.40;ReadPosRankSum=2.541;VQSLOD=3.3302;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:26:32.88:0,33,532	1/1:4,0:4:5.99:49,6,0	0/0:10,0:3:0.13:0,0,30	0/0:24,0:13:39.01:0,39,367	1/1:6,20:25:3.01:47,3,0	1/1:7,14:20:9.03:252,9,0	1/1:10,7:17:3.01:47,3,0	0/1:13,0:14:99:106,0,149	1/1:8,10:18:6.02:273,6,0	1/1:26,0:25:33.70:438,34,0	1/1:16,1:16:8.25:129,8,0	1/1:10,15:22:14.98:565,15,0	1/1:6,9:14:5.27:272,5,0	1/1:11,0:10:9:110,9,0	0/0:13,0:13:30.44:0,30,778	1/1:7,10:15:6.02:273,6,0	0/1:16,0:16:99:209,0,114	1/1:14,0:12:18.84:247,19,0	1/1:16,0:14:15.51:139,16,0	1/1:7,14:19:18.80:323,19,0	1/1:23,0:18:12.88:174,13,0	1/1:9,17:24:6.96:180,7,0	1/1:23,0:22:14.09:181,14,0	0/1:19,0:18:4.88:5,0,18	1/1:7,14:20:3.01:137,3,0	1/1:8,8:14:16.59:395,17,0	1/1:22,1:21:41.69:761,42,0	1/1:5,0:5:8.77:68,9,0
chr10	25520399	.	CACACACACACACAT	C	4682.20	PASS	AB=1.000;AC=46;AF=0.821;AN=56;BaseQRankSum=3.623;DP=517;FS=2.404;HRun=0;HaplotypeScore=164.7756;InbreedingCoeff=0.5082;MQ=48.51;MQ0=30;MQRankSum=-0.099;QD=10.79;ReadPosRankSum=2.847;VQSLOD=4.0343;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:26:32.88:0,33,444	1/1:4,0:4:5.99:49,6,0	0/0:15,0:8:15.14:0,15,180	0/0:25,0:14:39.01:0,39,367	1/1:26,0:25:2.96:19,3,0	1/1:21,0:20:9.01:157,9,0	1/1:15,0:15:2.97:20,3,0	0/1:17,0:17:87.20:189,0,87	1/1:17,1:18:6.02:210,6,0	1/1:26,0:25:50.64:425,51,0	1/1:19,0:18:14.93:122,15,0	1/1:24,0:21:14.98:435,15,0	1/1:14,1:14:5.65:208,6,0	1/1:9,2:10:9:80,9,0	0/0:13,0:13:30.43:0,30,641	1/1:16,1:15:6.02:211,6,0	0/1:17,0:17:53.98:235,0,54	1/1:13,0:11:17.41:181,17,0	1/1:17,0:15:19.30:152,19,0	1/1:20,0:18:18.68:207,19,0	1/1:23,0:18:11.99:150,12,0	1/1:25,1:24:6.89:124,7,0	1/1:21,1:21:21.52:269,22,0	1/1:8,11:18:3.04:54,3,0	1/1:21,0:20:3.01:105,3,0	1/1:15,0:13:20.34:350,20,0	1/1:22,2:22:44.68:663,45,0	1/1:4,0:4:8.95:68,9,0
chr10	25520411	.	CAT	C	3460.34	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=4.164;DP=425;FS=2.062;HRun=0;HaplotypeScore=84.8289;InbreedingCoeff=0.6447;MQ=65.85;MQ0=14;MQRankSum=-3.773;QD=10.55;ReadPosRankSum=2.835;VQSLOD=3.3462;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:25:0.50:0,1,172	1/1:5,0:5:14.97:121,15,0	0/0:26,0:19:47.89:0,48,459	0/0:29,0:17:47.98:0,48,438	1/1:21,0:20:2.92:17,3,0	1/1:15,0:15:8.87:57,9,0	1/1:7,0:7:2.94:18,3,0	1/1:3,15:18:18.70:325,19,0	1/1:11,0:11:5.97:48,6,0	1/1:22,0:22:62.59:523,63,0	1/1:12,0:12:18.11:161,18,0	1/1:15,0:15:14.85:100,15,0	1/1:11,0:10:6.28:42,6,0	1/1:9,0:9:14.97:122,15,0	0/0:15,0:15:35.92:0,36,355	1/1:12,0:11:5.97:45,6,0	1/1:17,0:17:26.76:266,27,0	1/1:13,0:11:26.77:197,27,0	1/1:12,0:10:26.61:205,27,0	1/1:15,0:14:17.65:109,18,0	1/1:19,0:15:17.96:147,18,0	1/1:19,0:18:5.90:38,6,0	1/1:13,0:14:23.61:180,24,0	1/1:12,0:12:2.51:16,3,0	1/1:15,0:14:2.98:21,3,0	1/1:9,0:8:23.93:201,24,0	1/1:20,0:19:53.50:391,53,0	1/1:5,0:5:14.90:111,15,0
chr10	25521059	.	AT	A	17132.51	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=5.059;DP=634;FS=8.439;HRun=4;HaplotypeScore=68.5663;InbreedingCoeff=0.9967;MQ=80.42;MQ0=0;MQRankSum=-6.577;QD=32.26;ReadPosRankSum=1.848;VQSLOD=5.3493;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:57.19:0,57,797	1/1:0,8:8:18.06:216,18,0	0/0:26,0:26:72.23:0,72,954	0/0:17,0:17:26.83:0,27,570	1/1:0,31:31:93.29:1115,93,0	1/1:0,21:21:51.16:612,51,0	1/1:0,18:18:48.15:576,48,0	1/1:1,38:39:99:1308,111,0	1/1:2,22:24:60.18:720,60,0	1/1:2,26:28:75.19:865,75,0	1/1:0,22:22:66.08:757,66,0	1/1:0,22:22:63.19:756,63,0	1/1:0,22:22:63.19:756,63,0	1/1:1,24:25:63.19:756,63,0	0/0:40,0:40:99:0,117,1605	1/1:2,16:18:48.15:576,48,0	1/1:1,20:21:42.13:504,42,0	1/1:0,8:8:24.07:288,24,0	1/1:2,20:22:60.13:691,60,0	1/1:2,30:32:90.18:1046,90,0	1/1:0,27:27:75.23:900,75,0	1/1:1,27:28:81.25:971,81,0	1/1:1,16:17:48.15:575,48,0	1/1:1,11:12:30.09:360,30,0	1/1:0,20:20:57.17:684,57,0	1/1:0,20:20:60.15:696,60,0	1/1:1,31:32:84.26:1008,84,0	1/1:0,14:14:33.10:396,33,0
chr10	25521933	.	AT	A	11468.83	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=3.386;DP=536;FS=0.000;HRun=9;HaplotypeScore=53.2167;InbreedingCoeff=0.9477;MQ=66.69;MQ0=0;MQRankSum=-2.987;QD=22.94;ReadPosRankSum=1.374;VQSLOD=5.5714;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,25:25:69.04:632,69,0	1/1:0,11:11:24.01:220,24,0	0/0:5,0:5:11.82:0,12,90	0/0:6,0:5:12.03:0,12,132	1/1:5,31:36:93.05:851,93,0	1/1:3,24:27:57.02:522,57,0	1/1:1,8:9:18.01:165,18,0	1/1:5,31:36:93.04:851,93,0	1/1:3,9:12:24:220,24,0	1/1:4,27:31:81.03:736,81,0	1/1:5,27:32:75.04:686,75,0	1/1:2,11:14:32.05:281,32,0	1/1:1,17:18:48.03:439,48,0	1/1:0,18:18:39.02:357,39,0	0/0:24,0:24:66.18:0,66,752	1/1:1,16:17:42.02:384,42,0	1/1:2,22:24:59.94:549,60,0	1/1:2,19:21:57.02:521,57,0	1/1:1,25:26:75.03:687,75,0	1/1:3,34:37:99:952,105,0	1/1:1,3:4:9:82,9,0	1/1:0,8:8:18:165,18,0	1/1:1,12:13:33.02:302,33,0	1/1:0,8:8:21.01:192,21,0	1/1:0,22:22:57.03:522,57,0	1/1:3,10:13:30.01:274,30,0	1/1:3,22:25:60.03:549,60,0	1/1:1,12:13:36.02:330,36,0
chr10	25522326	.	T	TA	1347.93	PASS	AB=0.875;AC=5;AF=0.089;AN=56;BaseQRankSum=-6.183;DP=520;FS=11.908;HRun=9;HaplotypeScore=72.3446;InbreedingCoeff=0.7693;MQ=67.75;MQ0=0;MQRankSum=-0.101;QD=20.12;ReadPosRankSum=-2.748;VQSLOD=2.2804;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:65.95:0,66,569	0/0:11,0:11:29.99:0,30,260	0/0:12,0:12:17.70:0,18,138	0/0:10,0:10:14.21:0,14,111	0/0:25,0:25:62.85:0,63,536	0/0:22,0:22:59.98:0,60,517	0/0:20,0:20:50.96:0,51,440	1/1:5,27:31:58.09:823,58,0	0/0:18,0:18:47.98:0,48,417	0/0:22,0:22:47.96:0,48,417	0/0:22,0:22:46.84:0,47,435	0/0:8,0:8:24:0,24,208	0/0:23,0:23:65.98:0,66,573	0/0:13,0:13:32.96:0,33,281	0/0:12,0:12:32.98:0,33,286	0/0:13,0:13:35.98:0,36,310	1/1:1,20:21:57.15:630,57,0	0/1:12,2:14:24.42:24,0,259	0/0:23,0:22:56.96:0,57,492	0/0:34,0:34:86.95:0,87,750	0/0:14,0:14:32.97:0,33,282	0/0:16,0:16:41.97:0,42,365	0/0:10,0:10:23.99:0,24,208	0/0:10,0:10:29.98:0,30,257	0/0:21,0:21:50.95:0,51,439	0/0:22,0:22:56.97:0,57,492	0/0:33,0:33:86.95:0,87,750	0/0:12,0:12:29.98:0,30,260
chr10	25523444	.	AT	A	886.33	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.176;DP=487;FS=9.528;HRun=7;HaplotypeScore=50.6176;InbreedingCoeff=0.8699;MQ=67.14;MQ0=1;MQRankSum=2.693;QD=23.32;ReadPosRankSum=-4.934;VQSLOD=1.0978;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:66.01:0,66,779	0/0:10,0:10:24.08:0,24,302	0/0:12,0:8:6.56:0,7,93	0/0:9,0:8:17.61:0,18,129	0/0:27,0:27:60.11:0,60,713	0/0:16,0:16:48.13:0,48,578	0/0:16,0:16:42.11:0,42,503	1/1:5,33:38:99:981,99,0	0/0:15,0:15:45.13:0,45,550	0/0:22,0:22:57.17:0,57,695	0/0:19,0:19:51.08:0,51,593	0/0:17,0:17:42.13:0,42,527	0/0:15,0:15:42.11:0,42,504	0/0:14,0:13:36.11:0,36,439	0/0:20,1:21:28.65:0,29,585	0/0:7,0:7:18.06:0,18,226	0/0:30,0:30:81.19:0,81,976	0/0:15,0:15:45.13:0,45,552	0/0:25,0:25:48.14:0,48,581	0/0:12,0:12:35.59:0,36,409	0/0:11,0:11:33.08:0,33,387	0/0:5,0:5:12.04:0,12,151	0/0:12,0:12:24.08:0,24,302	0/0:13,0:13:28.32:0,28,330	0/0:22,0:22:54.17:0,54,668	0/0:20,0:20:54.13:0,54,623	0/0:24,0:24:72.21:0,72,880	0/0:15,0:15:29.99:0,30,328
chr10	25523813	.	TAGTA	T	4407.43	PASS	AB=0.790;AC=25;AF=0.446;AN=56;BaseQRankSum=-3.600;DP=481;FS=1.796;HRun=0;HaplotypeScore=234.8902;InbreedingCoeff=-0.4683;MQ=72.35;MQ0=0;MQRankSum=-5.114;QD=11.24;ReadPosRankSum=-9.321;VQSLOD=1.8804;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:84.18:0,84,2079	0/1:5,1:6:19.95:46,0,20	0/0:15,0:15:42.14:0,42,1030	0/0:19,0:19:19.88:0,20,928	0/1:21,7:28:70.77:259,0,71	0/1:15,6:21:45.65:158,0,46	0/1:8,2:10:13.47:54,0,13	0/1:28,0:28:99:498,0,236	0/1:14,2:16:32.12:162,0,32	0/1:12,6:19:25.84:279,0,26	0/1:14,6:20:32.49:251,0,32	0/1:10,5:15:25.33:215,0,25	0/1:7,5:12:14.85:215,0,15	0/1:10,3:13:42.53:149,0,43	0/0:18,0:18:54.17:0,54,1421	0/1:13,7:20:49.03:87,0,49	0/0:7,2:9:15.36:0,15,49	0/1:5,3:8:1.06:32,0,1	1/1:6,5:11:4.77:261,5,0	0/1:22,5:27:68.08:68,0,71	1/1:3,3:6:8.60:63,9,0	0/1:5,5:11:25.28:213,0,25	0/1:19,10:29:56.69:262,0,57	0/1:3,7:10:4.01:4,0,22	0/1:12,2:14:33.02:104,0,33	0/1:14,4:18:7.51:354,0,8	0/1:30,11:41:65.50:563,0,66	0/1:7,2:9:9.99:111,0,10
chr10	25523814	.	A	AATGG	20888.04	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=10.885;DP=467;FS=3.496;HRun=0;HaplotypeScore=176.4943;InbreedingCoeff=0.9086;MQ=71.91;MQ0=1;MQRankSum=-11.885;QD=53.84;ReadPosRankSum=2.876;VQSLOD=5.7465;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:81.19:0,81,1538	1/1:1,5:6:18.06:423,18,0	0/0:14,0:14:42.14:0,42,815	0/0:18,0:18:33.96:0,34,703	1/1:9,17:28:48.74:1254,49,0	1/1:6,13:20:51.17:1152,51,0	1/1:2,5:8:21.07:479,21,0	1/1:28,0:28:52.26:700,52,0	1/1:4,11:15:39.60:891,40,0	1/1:7,12:19:55.42:1121,55,0	1/1:7,14:20:54.18:1220,54,0	1/1:5,10:15:42.14:914,42,0	1/1:5,6:11:30.10:622,30,0	1/1:3,8:12:36.12:773,36,0	0/0:19,0:19:54.16:0,54,1056	1/1:7,13:20:45.15:1057,45,0	1/1:2,7:9:21.07:520,21,0	1/1:3,3:6:12.04:267,12,0	1/1:5,5:10:30.10:613,30,0	1/1:6,20:26:63.17:1528,63,0	1/1:3,3:6:9.03:220,9,0	1/1:6,5:11:30.10:597,30,0	1/1:10,19:29:64.18:1477,64,0	1/1:7,2:9:0.68:71,1,0	1/1:2,11:13:39.13:897,39,0	1/1:7,9:17:46.87:949,47,0	1/1:13,28:41:99:2613,118,0	1/1:2,6:8:24.08:532,24,0
chr10	25523815	.	GTAAA	G	2535.37	PASS	AB=0.984;AC=21;AF=0.375;AN=56;BaseQRankSum=-6.947;DP=466;FS=7.901;HRun=0;HaplotypeScore=238.1855;InbreedingCoeff=-0.5867;MQ=71.94;MQ0=1;MQRankSum=-1.563;QD=7.37;ReadPosRankSum=-8.895;VQSLOD=-0.5710;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:78.27:0,78,2100	0/1:6,0:6:23.87:24,0,114	0/0:14,0:14:39.13:0,39,1012	0/0:17,1:18:3.98:0,4,922	0/1:28,0:28:81.68:82,0,257	0/1:20,0:20:75.34:75,0,285	0/1:8,0:8:22.21:22,0,116	0/1:13,14:27:99:730,0,190	0/1:15,0:15:66.24:66,0,213	0/1:18,0:19:99:139,0,272	0/1:21,0:20:99:140,0,240	0/1:15,0:15:99:127,0,198	0/1:11,0:11:99:135,0,125	0/1:12,0:12:84.92:85,0,183	0/0:19,0:19:54.19:0,54,1500	0/1:20,0:20:35.77:36,0,284	0/0:9,0:9:20.99:0,21,181	0/1:6,0:6:8.98:9,0,57	0/1:10,0:10:88.48:143,0,88	0/0:26,0:26:4.11:0,4,406	0/1:6,0:6:1.09:12,0,1	0/1:11,0:11:99:141,0,129	0/1:29,0:29:99:121,0,326	0/0:9,0:9:5.50:0,5,37	0/1:13,0:13:44.47:44,0,210	0/1:18,0:18:99:192,0,170	0/1:41,0:41:99:305,0,561	0/1:8,0:8:60.29:60,0,109
chr10	25523816	.	T	TG	3886.70	PASS	AB=0.659;AC=45;AF=0.804;AN=56;BaseQRankSum=15.305;DP=464;FS=3.963;HRun=1;HaplotypeScore=218.1579;InbreedingCoeff=0.6407;MQ=71.07;MQ0=1;MQRankSum=-10.357;QD=9.99;ReadPosRankSum=6.857;VQSLOD=1.7271;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:75.22:0,75,1012	1/1:1,5:6:10.02:84,10,0	0/0:13,0:13:38.15:0,38,490	0/0:18,0:18:12.27:0,12,435	1/1:8,17:28:25.64:196,26,0	1/1:6,14:20:26.89:218,27,0	1/1:3,5:8:12.73:90,13,0	0/1:15,0:28:11.06:111,0,11	1/1:4,11:15:33.47:236,33,0	1/1:6,13:19:22.14:241,22,0	1/1:7,14:20:29.50:209,29,0	1/1:5,10:15:10.45:140,10,0	0/1:5,6:11:1.20:73,0,1	1/1:3,9:12:11.89:122,12,0	0/0:18,0:18:54.18:0,54,750	1/1:7,13:20:29.10:205,29,0	1/1:2,7:9:20.35:114,20,0	1/1:3,3:6:11.84:78,12,0	1/1:5,5:10:6.34:108,6,0	1/1:5,20:26:53.56:325,54,0	1/1:3,3:6:8.67:47,9,0	0/1:5,6:11:1.24:75,0,1	1/1:10,19:29:23.40:235,23,0	1/1:7,2:9:4.94:22,5,0	1/1:2,11:13:22.69:167,23,0	1/1:9,9:18:18.59:236,19,0	1/1:12,28:41:40.88:462,41,0	1/1:2,6:8:8.21:91,8,0
chr10	25523817	.	A	AAT	13145.84	PASS	AB=0.714;AC=44;AF=0.786;AN=56;BaseQRankSum=15.750;DP=556;FS=8.936;HRun=0;HaplotypeScore=243.9732;InbreedingCoeff=0.5944;MQ=66.21;MQ0=1;MQRankSum=-8.332;QD=27.39;ReadPosRankSum=3.718;VQSLOD=4.3598;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:78.21:0,78,1142	1/1:6,5:11:22.62:384,23,0	0/0:13,0:13:36.12:0,36,535	0/0:18,0:18:6.33:0,6,460	1/1:12,21:33:67.36:879,67,0	1/1:12,14:26:34.80:737,35,0	1/1:7,6:13:22.61:389,23,0	0/1:23,13:36:78.19:864,0,78	1/1:4,11:16:30.72:519,31,0	1/1:16,13:29:39.09:940,39,0	1/1:11,14:25:27.07:652,27,0	1/1:8,10:18:9.22:480,9,0	0/1:8,6:14:0.04:259,0,0	1/1:5,9:14:10.76:412,11,0	0/0:19,0:19:54.18:0,54,827	1/1:11,13:24:36.19:662,36,0	1/1:6,7:13:33.11:444,33,0	1/1:6,3:9:15.03:210,15,0	0/1:8,5:13:0.90:305,0,1	1/1:12,21:33:70.76:1032,71,0	1/1:4,3:7:12.04:163,12,0	0/1:8,5:14:2.93:305,0,3	1/1:12,19:31:33.28:791,33,0	1/1:10,2:12:11.87:137,12,0	1/1:5,11:16:27.18:540,27,0	1/1:7,10:18:11.78:547,12,0	1/1:16,29:46:24.36:1265,24,0	1/1:2,6:8:3.11:230,3,0
chr10	25524703	.	TA	T	24438.14	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=13.594;DP=736;FS=0.772;HRun=1;HaplotypeScore=121.5452;InbreedingCoeff=0.9975;MQ=87.00;MQ0=0;MQRankSum=-8.503;QD=39.42;ReadPosRankSum=3.341;VQSLOD=4.5376;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,105,1653	1/1:1,10:11:33.11:460,33,0	0/0:24,0:24:72.24:0,72,1116	0/0:24,0:24:63.21:0,63,994	1/1:0,37:37:99:1384,99,0	1/1:1,28:29:84.28:1164,84,0	1/1:0,19:19:51.17:713,51,0	1/1:0,31:31:93.28:1266,93,0	1/1:0,32:32:90.30:1259,90,0	1/1:0,31:31:93.31:1301,93,0	1/1:0,34:34:93.31:1300,93,0	1/1:0,23:23:69.23:965,69,0	1/1:0,27:27:78.26:1091,78,0	1/1:0,32:32:87.29:1217,87,0	0/0:33,0:33:99:0,99,1560	1/1:0,27:27:75.25:1049,75,0	1/1:0,23:23:57.19:797,57,0	1/1:0,6:6:18.06:252,18,0	1/1:0,20:20:60.20:839,60,0	1/1:0,43:43:99:1720,123,0	1/1:0,32:32:90.30:1259,90,0	1/1:0,26:26:69.23:965,69,0	1/1:0,29:29:81.27:1133,81,0	1/1:0,29:29:78.26:1091,78,0	1/1:0,20:20:57.19:797,57,0	1/1:0,17:17:51.17:714,51,0	1/1:0,32:32:93.31:1300,93,0	1/1:0,10:10:30.08:402,30,0
chr10	25525323	.	CAT	C	8267.95	PASS	AC=46;AF=0.852;AN=54;BaseQRankSum=-2.614;DP=466;FS=28.586;HRun=0;HaplotypeScore=68.7450;InbreedingCoeff=0.9123;MQ=66.77;MQ0=33;MQRankSum=-2.471;QD=27.65;ReadPosRankSum=1.664;VQSLOD=3.2549;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:25:50.36:0,50,820	1/1:7,0:7:20.54:259,21,0	0/0:50,0:28:53.66:0,54,1099	0/0:49,0:17:15.27:0,15,506	1/1:10,1:13:17.65:292,18,0	1/1:14,0:15:38.99:488,39,0	1/1:13,2:15:38.97:554,39,0	1/1:0,20:20:60.20:882,60,0	1/1:7,0:10:12.51:230,13,0	1/1:12,0:14:21.12:325,21,0	1/1:3,1:4:8.62:100,9,0	1/1:13,2:18:29.38:502,29,0	1/1:14,0:16:23.31:424,23,0	1/1:5,0:5:15.04:213,15,0	0/0:23,0:23:66.07:0,66,1040	1/1:9,0:9:24.04:306,24,0	1/1:16,1:19:28.83:400,29,0	1/1:7,0:6:9.88:136,10,0	1/1:11,0:13:25.92:443,26,0	1/1:14,0:16:36.11:522,36,0	./.	1/1:6,0:7:14.85:210,15,0	1/1:9,0:10:18.01:192,18,0	1/1:12,0:16:21.65:282,22,0	1/1:10,0:11:27.08:391,27,0	1/1:17,0:17:28.17:501,28,0	1/1:19,2:23:29.28:525,29,0	1/1:2,0:5:6.02:92,6,0
chr10	25525572	.	AG	A	5043.40	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=11.262;DP=642;FS=0.977;HRun=7;HaplotypeScore=192.0592;InbreedingCoeff=0.9409;MQ=82.34;MQ0=0;MQRankSum=-4.785;QD=8.71;ReadPosRankSum=5.448;VQSLOD=1.3198;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:14,3:16:9.37:69,9,0	1/1:9,0:9:16.04:66,16,0	0/0:22,0:22:53.31:0,53,678	0/0:18,1:19:47.50:0,47,492	1/1:34,0:34:62.14:299,62,0	1/1:30,0:30:62.87:273,63,0	1/1:18,0:18:35.80:151,36,0	1/1:27,0:27:59.10:254,59,0	1/1:22,0:22:32.14:175,32,0	1/1:26,0:26:51.64:227,52,0	1/1:34,0:34:62.35:302,62,0	1/1:18,0:18:33.36:155,33,0	1/1:16,0:16:37.22:159,37,0	1/1:21,0:21:11.03:121,11,0	0/0:22,0:22:60.19:0,60,755	1/1:27,0:27:57.39:248,57,0	1/1:11,0:10:22.50:94,22,0	1/1:7,0:7:13.72:61,14,0	1/1:23,0:23:50.98:200,51,0	1/1:39,0:39:89.76:398,90,0	1/1:20,0:20:47.05:202,47,0	1/1:29,0:29:51.24:243,51,0	1/1:28,0:28:32.86:154,33,0	1/1:19,0:19:43.66:208,44,0	1/1:32,0:32:71.57:323,72,0	1/1:27,0:27:65.23:293,65,0	1/1:41,0:41:65.90:327,66,0	1/1:4,0:4:10.45:42,10,0
chr10	25525577	.	G	GA	16592.56	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=9.344;DP=622;FS=0.919;HRun=0;HaplotypeScore=151.0600;InbreedingCoeff=0.9521;MQ=83.76;MQ0=0;MQRankSum=-8.483;QD=29.84;ReadPosRankSum=7.134;VQSLOD=4.2052;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,0:8:6.91:61,7,0	1/1:1,8:9:24.07:294,24,0	0/0:23,0:23:65.82:0,66,821	0/0:19,0:19:53.44:0,53,589	1/1:4,29:34:70.35:941,70,0	1/1:4,25:29:76.39:900,76,0	1/1:1,17:18:45.06:540,45,0	1/1:2,23:25:65.01:787,65,0	1/1:2,18:20:42.77:589,43,0	1/1:2,21:23:47.86:764,48,0	1/1:2,32:34:84.36:989,84,0	1/1:0,18:18:48.06:569,48,0	1/1:0,15:15:42.13:514,42,0	1/1:0,19:19:56.75:595,57,0	0/0:24,0:24:69.21:0,69,919	1/1:2,24:26:52.13:729,52,0	1/1:1,11:11:24.08:296,24,0	1/1:1,6:7:15.05:184,15,0	1/1:3,21:24:66.07:788,66,0	1/1:8,31:39:79.38:1126,79,0	1/1:2,18:20:54.17:664,54,0	1/1:3,26:29:60.23:729,60,0	1/1:4,21:25:57.18:695,57,0	1/1:3,17:20:41.88:586,42,0	1/1:0,30:30:81.25:983,81,0	1/1:4,23:27:68.80:875,69,0	1/1:2,39:41:99:1243,104,0	1/1:0,4:4:12.04:150,12,0
chr10	25525579	.	G	GAAA	24746.42	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=8.555;DP=639;FS=6.455;HRun=4;HaplotypeScore=150.0820;InbreedingCoeff=0.9468;MQ=83.97;MQ0=0;MQRankSum=-9.381;QD=43.95;ReadPosRankSum=3.926;VQSLOD=3.7020;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:6:4.34:0,4,17	1/1:9,0:9:27.04:403,27,0	0/0:24,0:24:63.21:0,63,950	0/0:20,0:20:47.27:0,47,647	1/1:33,1:34:86.85:1435,87,0	1/1:28,1:29:81.64:1240,82,0	1/1:16,1:17:48.15:787,48,0	1/1:28,1:29:77.99:1283,78,0	1/1:23,0:23:54.17:886,54,0	1/1:24,0:24:70.77:1140,71,0	1/1:34,0:34:89.31:1411,89,0	1/1:18,0:18:48.16:804,48,0	1/1:15,0:15:42.14:708,42,0	1/1:20,0:20:60.20:1023,60,0	0/0:26,0:26:69.23:0,69,1056	1/1:27,0:27:66.22:1095,66,0	1/1:13,0:12:29.84:483,30,0	1/1:7,0:7:15.05:265,15,0	1/1:28,1:29:86.06:1415,86,0	1/1:37,1:38:99:1730,106,0	1/1:20,0:20:57.19:950,57,0	1/1:29,0:29:78.56:1189,79,0	1/1:25,0:25:66.71:898,67,0	1/1:20,0:20:53.75:833,54,0	1/1:29,0:29:84.27:1419,84,0	1/1:26,2:28:80.76:1343,81,0	1/1:42,0:42:99:1806,113,0	1/1:4,0:4:12.04:197,12,0
chr10	25526193	.	GA	G	9877.07	PASS	AB=0.747;AC=50;AF=0.893;AN=56;BaseQRankSum=2.430;DP=568;FS=6.246;HRun=10;HaplotypeScore=65.4127;InbreedingCoeff=0.6966;MQ=77.78;MQ0=1;MQRankSum=-4.419;QD=18.46;ReadPosRankSum=3.192;VQSLOD=5.7228;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,26:28:68.98:599,69,0	1/1:1,7:8:20.99:182,21,0	0/0:12,0:12:17.88:0,18,199	0/1:16,1:16:2.04:2,0,196	1/1:2,25:27:68.96:599,69,0	1/1:2,21:23:59.99:521,60,0	1/1:2,18:20:44.99:391,45,0	1/1:2,0:39:61.44:199,61,0	1/1:3,14:17:38.97:336,39,0	1/1:5,15:20:49.99:416,50,0	1/1:3,12:15:35:288,35,0	1/1:1,16:17:41.99:364,42,0	1/1:2,20:22:53.98:469,54,0	1/1:2,9:11:26.98:234,27,0	0/0:21,0:21:54.15:0,54,597	1/1:4,18:22:50.73:443,51,0	1/1:3,21:24:23.81:436,24,0	1/1:1,15:16:44.98:391,45,0	1/1:5,18:23:4.19:408,4,0	1/1:3,22:27:36.88:526,37,0	1/1:3,19:22:50.98:443,51,0	1/1:0,10:10:29.99:260,30,0	0/1:4,18:22:6.38:408,0,6	1/1:1,20:21:53.99:469,54,0	1/1:0,20:20:56.98:495,57,0	1/1:1,0:17:28.99:87,29,0	1/1:2,26:28:62.98:547,63,0	1/1:2,16:18:41.98:365,42,0
chr10	25526362	.	GC	G	3417.28	PASS	AB=1.000;AC=42;AF=0.750;AN=56;BaseQRankSum=8.620;DP=583;FS=1.938;HRun=1;HaplotypeScore=123.9788;InbreedingCoeff=0.2033;MQ=76.55;MQ0=0;MQRankSum=-5.839;QD=6.41;ReadPosRankSum=9.893;VQSLOD=-0.1032;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:43,0:43:88.95:301,89,0	1/1:12,0:12:3.65:68,4,0	0/0:15,0:15:13.04:0,13,506	0/0:21,1:22:50.72:0,51,787	0/1:24,0:24:7.92:117,0,8	0/1:22,0:22:45.38:110,0,45	0/1:16,0:16:37.19:59,0,37	0/1:35,0:35:82.98:83,0,103	1/1:22,0:22:29.08:174,29,0	1/1:30,1:31:5.20:164,5,0	1/1:19,0:19:27.50:161,27,0	1/1:15,0:15:37.25:148,37,0	1/1:19,0:19:47.62:200,48,0	1/1:22,0:22:10.43:156,10,0	0/0:12,0:12:36.11:0,36,551	1/1:19,0:19:44.09:158,44,0	1/1:34,0:34:19.71:171,20,0	1/1:16,0:16:34.58:125,35,0	0/1:24,0:24:68.69:89,0,69	1/1:27,1:28:45.29:260,45,0	0/1:18,0:18:19.78:71,0,20	1/1:18,1:19:30.17:185,30,0	1/1:15,0:15:33.20:126,33,0	1/1:20,0:20:16.60:125,17,0	0/1:19,0:19:23.92:110,0,24	1/1:11,0:11:22.18:82,22,0	0/1:22,0:22:15.72:108,0,16	1/1:8,0:8:19.04:68,19,0
chr10	25526363	.	CT	C	15168.81	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-0.351;DP=582;FS=4.957;HRun=6;HaplotypeScore=82.9163;InbreedingCoeff=0.9938;MQ=77.25;MQ0=0;MQRankSum=-7.551;QD=28.51;ReadPosRankSum=4.321;VQSLOD=5.4545;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,43:43:99:1257,117,0	1/1:1,11:12:33.08:355,33,0	0/0:15,0:15:15.91:0,16,426	0/0:24,0:23:28.61:0,29,585	1/1:3,21:24:63.15:676,63,0	1/1:7,16:23:57.11:596,57,0	1/1:3,13:16:39.10:419,39,0	1/1:6,29:35:84.19:894,84,0	1/1:2,20:22:63.16:677,63,0	1/1:3,28:31:87.18:922,87,0	1/1:1,18:19:54.14:580,54,0	1/1:4,11:15:45.11:483,45,0	1/1:1,18:19:57.14:612,57,0	1/1:6,16:22:60.15:644,60,0	0/0:11,0:11:33.11:0,33,434	1/1:3,16:19:57.14:612,57,0	1/1:3,31:34:81.20:870,81,0	1/1:1,15:16:45.11:483,45,0	1/1:5,19:24:57.14:613,57,0	1/1:5,23:28:72.18:770,72,0	1/1:3,15:18:42.10:451,42,0	1/1:2,17:19:54.13:578,54,0	1/1:0,15:15:42.11:451,42,0	1/1:3,16:19:34.70:527,35,0	1/1:4,14:18:48.12:515,48,0	1/1:1,10:11:30.08:322,30,0	1/1:3,19:22:57.12:603,57,0	1/1:0,8:8:24.06:257,24,0
chr10	25526432	.	G	GT	21966.57	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=9.435;DP=750;FS=8.051;HRun=1;HaplotypeScore=125.2844;InbreedingCoeff=0.9934;MQ=83.68;MQ0=0;MQRankSum=-8.507;QD=40.60;ReadPosRankSum=3.209;VQSLOD=3.7871;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:64,0:64:99:0,187,2415	1/1:5,5:10:24.05:317,24,0	0/0:22,0:22:62.84:0,63,743	0/0:28,0:28:74.03:0,74,937	1/1:3,20:23:63.21:943,63,0	1/1:1,28:30:84.08:1169,84,0	1/1:2,32:34:96.31:1418,96,0	0/0:30,0:30:90.28:0,90,1144	1/1:2,18:20:57.19:848,57,0	1/1:3,27:30:90.30:1342,90,0	1/1:0,21:21:62.84:802,63,0	1/1:1,27:28:81.21:1181,81,0	1/1:3,34:38:99:1562,108,0	1/1:3,24:27:75.24:1098,75,0	0/0:25,0:25:72.19:0,72,892	1/1:1,27:28:78.19:1124,78,0	0/0:40,0:40:99:0,117,1505	1/1:1,13:14:39.13:584,39,0	1/1:1,19:20:60.19:872,60,0	1/1:3,37:40:99:1685,117,0	1/1:3,28:31:78.18:1141,78,0	1/1:1,18:19:53.97:721,54,0	1/1:2,26:28:71.89:1072,72,0	1/1:1,26:27:71.69:1018,72,0	1/1:3,18:21:60.14:870,60,0	1/1:1,18:20:54.18:805,54,0	1/1:2,26:28:81.27:1212,81,0	1/1:0,4:4:12.04:180,12,0
chr10	25528349	.	C	CT	812.87	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-4.018;DP=639;FS=10.448;HRun=5;HaplotypeScore=81.8627;InbreedingCoeff=0.9973;MQ=77.47;MQ0=4;MQRankSum=-1.687;QD=29.03;ReadPosRankSum=0.818;VQSLOD=3.5370;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,26:28:69.22:908,69,0	0/0:12,0:12:33.08:0,33,355	0/0:20,0:20:51.10:0,51,535	0/0:11,0:11:27.06:0,27,288	0/0:25,0:25:63.16:0,63,677	0/0:20,0:19:36.09:0,36,387	0/0:16,0:16:42.11:0,42,451	0/0:39,0:39:99:0,105,1120	0/0:21,0:21:48.10:0,48,506	0/0:27,0:27:75.19:0,75,805	0/0:23,0:21:60.15:0,60,644	0/0:16,0:15:42.10:0,42,451	0/0:23,0:22:36.08:0,36,386	0/0:28,0:27:66.16:0,66,709	0/0:36,0:36:99:0,105,1128	0/0:19,0:19:51.13:0,51,548	0/0:22,0:22:66.14:0,66,699	0/0:19,0:19:51.13:0,51,548	0/0:14,0:14:39.10:0,39,419	0/0:23,0:23:63.16:0,63,677	0/0:26,0:26:72.18:0,72,774	0/0:27,0:26:63.16:0,63,676	0/0:29,0:29:72.16:0,72,765	0/0:20,0:20:42.08:0,42,441	0/0:22,0:20:45.10:0,45,476	0/0:32,0:32:96.23:0,96,1019	0/0:32,0:32:90.17:0,90,945	0/0:9,0:9:27.07:0,27,290
chr10	25528394	.	A	ATC	13390.47	PASS	AB=0.735;AC=43;AF=0.768;AN=56;BaseQRankSum=-9.635;DP=636;FS=4.143;HRun=0;HaplotypeScore=100.6668;InbreedingCoeff=0.6770;MQ=69.52;MQ0=7;MQRankSum=1.519;QD=27.11;ReadPosRankSum=2.628;VQSLOD=5.7824;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:36.11:0,36,436	0/1:3,6:9:18.34:223,0,18	0/0:37,0:25:29.06:0,29,268	0/1:38,0:19:13.09:13,0,82	0/1:8,9:17:6.30:402,0,6	1/1:10,20:29:8.81:641,9,0	1/1:4,16:21:28:615,28,0	0/0:19,0:35:57.85:0,58,279	1/1:5,21:24:42.14:677,42,0	1/1:2,20:22:63.05:926,63,0	1/1:13,4:14:24.08:383,24,0	1/1:8,11:18:36.12:575,36,0	1/1:3,28:30:54.18:870,54,0	1/1:6,24:29:60.20:968,60,0	0/0:29,0:29:54.16:0,54,654	1/1:4,14:18:2.79:533,3,0	0/0:21,0:21:27.06:0,27,314	1/1:9,7:16:36.12:568,36,0	1/1:6,7:13:24.01:336,24,0	1/1:5,8:13:30.57:479,31,0	1/1:12,15:27:56.40:862,56,0	1/1:11,11:21:17.71:727,18,0	1/1:5,9:14:18.06:290,18,0	1/1:4,17:21:33.11:532,33,0	1/1:4,12:16:33.11:532,33,0	1/1:5,27:32:41.77:1154,42,0	1/1:12,15:27:54.16:844,54,0	1/1:5,7:12:15.05:242,15,0
chr10	25528412	.	GTC	G	670.02	PASS	AB=0.987;AC=3;AF=0.054;AN=56;BaseQRankSum=2.082;DP=692;FS=13.700;HRun=0;HaplotypeScore=150.9060;InbreedingCoeff=0.7082;MQ=58.19;MQ0=18;MQRankSum=-5.317;QD=6.09;ReadPosRankSum=-4.112;VQSLOD=1.6325;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:30.10:0,30,501	0/0:10,0:10:24.05:0,24,339	0/0:51,0:21:12.91:0,13,66	0/1:75,1:19:3.55:4,0,82	0/0:20,0:20:45.14:0,45,682	0/0:29,0:28:60.18:0,60,944	0/0:18,0:18:44.60:0,45,713	1/1:18,16:32:69.14:764,69,0	0/0:25,0:23:45.13:0,45,669	0/0:25,0:25:66.16:0,66,1030	0/0:15,0:12:21.07:0,21,336	0/0:19,0:18:39.13:0,39,623	0/0:30,0:29:62.42:0,62,964	0/0:30,0:29:75.26:0,75,1208	0/0:26,0:26:63.22:0,63,1035	0/0:21,0:21:54.18:0,54,838	0/0:24,0:24:34.49:0,34,571	0/0:21,0:21:53.59:0,54,749	0/0:19,0:15:27.08:0,27,412	0/0:16,0:16:39.13:0,39,626	0/0:27,0:27:69.22:0,69,1092	0/0:23,0:22:51.14:0,51,757	0/0:13,0:13:27.09:0,27,432	0/0:20,0:20:39.12:0,39,640	0/0:17,0:16:39.13:0,39,633	0/0:34,0:34:85.14:0,85,1252	0/0:24,0:24:71.83:0,72,1072	0/0:10,0:9:21.07:0,21,335
chr10	25528448	.	CTG	C	134.77	PASS	AB=0.881;AC=5;AF=0.089;AN=56;BaseQRankSum=7.588;DP=761;FS=16.109;HRun=0;HaplotypeScore=156.4053;InbreedingCoeff=-0.0875;MQ=51.96;MQ0=32;MQRankSum=-5.381;QD=0.92;ReadPosRankSum=-3.054;VQSLOD=0.9670;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:13.70:0,14,140	0/0:6,0:6:15.05:0,15,280	0/1:61,0:7:5.63:6,0,84	0/0:117,0:19:17.86:0,18,273	0/0:19,1:20:17.38:0,17,699	0/1:25,2:27:2.39:2,0,805	0/0:20,1:21:14.42:0,14,772	0/0:28,0:24:69.05:0,69,1093	0/0:22,0:21:48.13:0,48,901	0/0:25,0:25:69.15:0,69,1175	0/1:9,6:14:98.77:99,0,405	0/1:17,1:18:8.41:8,0,565	0/0:21,0:21:37.71:0,38,694	0/0:33,0:33:80.96:0,81,1392	0/0:25,0:25:69.24:0,69,1294	0/0:27,0:27:66.11:0,66,1123	0/0:28,0:28:37.86:0,38,479	0/0:23,2:25:12.04:0,12,916	0/0:17,0:13:39.12:0,39,688	0/0:23,0:23:51.12:0,51,892	0/0:29,0:29:66.60:0,67,1219	0/1:20,6:25:99:121,0,720	0/0:20,0:20:45.14:0,45,832	0/0:19,2:21:45.13:0,45,846	0/0:14,2:16:35.92:0,36,483	0/0:30,1:31:24.52:0,25,1435	0/0:31,0:31:88.98:0,89,1577	0/0:11,0:10:21.05:0,21,359
chr10	25528461	.	ACT	A	446.94	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=2.961;DP=762;FS=4.312;HRun=0;HaplotypeScore=152.5301;InbreedingCoeff=0.5795;MQ=52.85;MQ0=38;MQRankSum=-0.786;QD=11.46;ReadPosRankSum=2.024;VQSLOD=3.5252;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:14,0:14:5.80:6,0,14	0/0:5,0:5:15.05:0,15,239	0/0:71,0:9:0.37:0,0,24	0/0:116,1:23:19.26:0,19,155	0/0:17,0:16:20.99:0,21,316	0/0:22,0:22:43.34:0,43,713	0/0:22,0:22:55.39:0,55,822	0/0:35,0:30:75.05:0,75,1048	0/0:21,0:20:42.13:0,42,674	0/0:23,0:23:54.14:0,54,848	0/0:15,0:14:33.93:0,34,375	0/0:21,0:20:30.53:0,31,452	0/0:21,0:21:45.13:0,45,708	0/0:33,0:33:72.20:0,72,1109	0/0:24,0:24:66.21:0,66,1081	0/0:27,0:27:51.16:0,51,802	1/1:2,23:25:42.14:540,42,0	0/0:22,1:23:18.31:0,18,728	0/0:19,0:17:46.03:0,46,700	0/0:21,0:21:39.06:0,39,616	0/0:26,0:26:57.13:0,57,900	0/0:24,0:23:41.83:0,42,577	0/0:21,0:21:36.11:0,36,576	0/0:26,0:25:45.10:0,45,687	0/0:12,0:12:23.90:0,24,344	0/0:31,0:30:77.71:0,78,1100	0/0:34,0:34:82.42:0,82,1323	0/0:10,0:9:15:0,15,200
chr10	25528534	.	TTC	T	10294.13	PASS	AB=0.808;AC=43;AF=0.768;AN=56;BaseQRankSum=-2.405;DP=742;FS=5.972;HRun=0;HaplotypeScore=183.4943;InbreedingCoeff=0.6804;MQ=51.27;MQ0=35;MQRankSum=5.336;QD=21.18;ReadPosRankSum=6.604;VQSLOD=4.6256;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:10,0:10:1.16:1,0,38	0/1:7,2:9:0.26:114,0,0	0/0:75,0:16:19.86:0,20,259	0/0:105,0:24:14.54:0,15,192	1/1:5,22:26:54.33:634,54,0	1/1:8,11:19:38.31:405,38,0	1/1:8,13:21:23.08:393,23,0	0/0:35,0:30:25.69:0,26,813	1/1:4,12:16:26.35:380,26,0	1/1:5,15:20:21.67:597,22,0	1/1:4,13:17:31.67:325,32,0	1/1:10,15:24:13.68:346,14,0	1/1:16,22:38:69.57:979,70,0	1/1:5,11:15:26.33:337,26,0	0/0:18,0:18:44.85:0,45,630	1/1:8,13:21:19.83:292,20,0	0/0:21,1:22:18.27:0,18,671	1/1:1,19:20:3.26:610,3,0	0/1:8,15:22:19.57:485,0,20	1/1:5,28:33:83.73:1001,84,0	1/1:7,21:27:50.94:569,51,0	1/1:6,19:25:47.92:589,48,0	1/1:3,20:23:39.04:469,39,0	1/1:9,11:19:2.26:357,2,0	1/1:9,9:18:27.50:322,28,0	1/1:12,8:19:16.15:388,16,0	1/1:21,12:33:40.25:632,40,0	1/1:2,2:4:0.77:70,1,0
chr10	25528546	.	G	GTCTC	1413.60	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=6.023;DP=764;FS=17.651;HRun=0;HaplotypeScore=275.9341;InbreedingCoeff=-0.0878;MQ=55.85;MQ0=30;MQRankSum=-7.550;QD=4.56;ReadPosRankSum=-7.348;VQSLOD=-0.0659;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:6,0:8:7.63:51,8,0	0/1:11,0:11:63.32:63,0,100	0/0:63,0:22:36.68:0,37,442	0/0:111,0:30:16.62:0,17,205	0/0:35,0:34:31.73:0,32,681	0/1:21,0:21:9.06:9,0,385	0/0:23,0:23:9.64:0,10,453	1/1:16,20:33:34.92:1020,35,0	0/1:21,0:21:30.61:31,0,431	0/1:27,0:27:12.18:12,0,784	0/0:19,0:19:34.10:0,34,407	0/1:23,0:22:98.73:99,0,399	0/0:36,0:36:38.57:0,39,1105	0/1:15,0:14:28.30:28,0,346	0/0:14,0:14:39.03:0,39,612	0/1:17,0:17:69.99:70,0,346	0/0:21,0:21:39.56:0,40,642	0/0:20,0:20:54.17:0,54,870	0/1:25,0:24:1.68:2,0,731	0/0:38,0:38:57.44:0,57,1158	0/0:25,0:25:53.72:0,54,661	0/1:28,0:28:12.55:13,0,688	0/0:23,0:23:45.04:0,45,654	0/0:21,0:20:35.70:0,36,421	0/1:18,0:17:10.20:10,0,297	0/1:20,0:19:83.55:84,0,358	0/1:32,0:32:64.38:64,0,677	0/1:5,0:5:23.50:23,0,89
chr10	25528550	.	C	CTG	1939.14	PASS	AB=0.846;AC=17;AF=0.304;AN=56;BaseQRankSum=11.358;DP=778;FS=13.973;HRun=0;HaplotypeScore=263.2953;InbreedingCoeff=-0.2967;MQ=56.55;MQ0=30;MQRankSum=-8.417;QD=5.54;ReadPosRankSum=-4.286;VQSLOD=1.2215;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,5:8:8.90:121,9,0	0/1:4,4:11:99:120,0,108	0/0:67,0:23:37.60:0,38,549	0/0:118,0:30:16.81:0,17,286	0/0:26,2:34:4.56:0,5,636	0/1:12,6:21:41.97:42,0,448	0/0:17,4:22:2.31:0,2,432	0/1:36,0:32:3.27:3,0,299	0/1:12,5:21:97.37:97,0,420	0/1:20,3:28:99:312,0,717	0/0:15,3:21:33.09:0,33,426	0/1:17,7:23:99:190,0,375	0/1:30,5:35:99:116,0,981	0/1:13,3:15:73.42:73,0,333	0/0:17,0:17:51.11:0,51,675	0/1:15,3:19:99:120,0,346	0/0:20,1:21:14.87:0,15,527	0/0:20,0:20:57.19:0,57,862	0/1:21,2:23:99:103,0,690	0/0:30,2:38:32.16:0,32,1066	0/0:21,2:24:50.99:0,51,654	0/1:20,4:27:42.59:43,0,688	0/0:22,0:23:45.15:0,45,654	0/0:18,3:20:38.98:0,39,507	0/1:11,6:17:40.48:40,0,368	0/1:12,2:19:99:294,0,350	0/1:22,9:32:99:365,0,676	0/1:2,1:7:57.88:58,0,79
chr10	25528576	.	C	CTT	4263.08	PASS	AB=0.982;AC=26;AF=0.464;AN=56;BaseQRankSum=9.323;DP=739;FS=51.547;HRun=1;HaplotypeScore=255.2799;InbreedingCoeff=-0.7132;MQ=56.94;MQ0=29;MQRankSum=-7.350;QD=7.91;ReadPosRankSum=-2.176;VQSLOD=-0.3949;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:5,1:6:8.48:71,0,8	1/1:9,0:9:1.73:151,2,0	0/0:74,0:25:43.01:0,43,421	0/0:105,0:30:19.31:0,19,326	0/1:25,0:25:99:168,0,200	0/1:25,0:25:99:150,0,365	0/1:21,1:22:99:109,0,281	0/1:29,6:31:99:504,0,549	0/1:21,0:20:99:166,0,261	0/1:29,0:28:99:330,0,401	0/1:21,1:22:90.53:218,0,91	0/1:23,0:23:99:149,0,361	0/1:31,0:30:99:149,0,587	0/1:17,0:16:53.44:198,0,53	0/0:21,0:21:60.18:0,60,876	0/1:14,0:14:99:103,0,149	0/1:13,1:14:12.33:12,0,290	0/1:20,0:20:62.73:63,0,433	0/1:18,0:17:99:157,0,372	0/1:30,0:30:99:252,0,317	0/1:22,0:22:0.19:0,0,342	0/1:30,0:30:99:196,0,376	0/1:17,0:17:99:103,0,126	0/1:17,0:16:70.22:70,0,154	0/1:23,0:22:99:221,0,234	0/1:24,0:23:99:315,0,258	0/1:34,0:33:99:349,0,365	0/1:11,0:11:27.82:59,0,28
chr10	25528585	.	ACT	A	4738.22	PASS	AB=0.980;AC=34;AF=0.607;AN=56;BaseQRankSum=3.516;DP=713;FS=3.605;HRun=0;HaplotypeScore=248.6557;InbreedingCoeff=-0.0903;MQ=53.85;MQ0=23;MQRankSum=-0.470;QD=9.03;ReadPosRankSum=-3.288;VQSLOD=3.6007;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:8,0:8:0.21:1,0,0	1/1:8,0:8:8.79:76,9,0	0/0:64,0:21:30.48:0,30,349	0/0:86,0:26:23.82:0,24,244	1/1:23,1:24:9.50:240,9,0	0/1:23,1:24:18.31:226,0,18	1/1:20,0:20:1.79:159,2,0	0/1:36,1:34:9.61:189,0,10	0/1:20,1:20:27.40:124,0,27	1/1:26,0:25:4.26:212,4,0	1/1:23,1:24:40.17:388,40,0	0/1:24,0:24:46.68:177,0,47	0/1:26,1:26:12.92:197,0,13	1/1:14,1:14:5.62:220,6,0	0/0:23,0:23:59.48:0,59,860	0/1:14,0:14:32.92:33,0,54	0/0:14,0:15:17.95:0,18,184	0/1:19,0:19:36.75:146,0,37	0/1:19,0:15:22.71:61,0,23	1/1:30,1:31:34.53:548,35,0	0/1:22,0:22:8.41:61,0,8	0/1:27,2:29:7.90:359,0,8	1/1:14,0:14:4.08:195,4,0	0/1:17,0:16:4.54:91,0,5	0/1:24,1:24:16.96:304,0,17	0/1:28,0:27:1.71:318,0,2	0/1:38,1:38:56.80:389,0,57	1/1:10,0:10:5.71:24,6,0
chr10	25528716	.	T	TTGTGTGTG	6957.92	PASS	AB=1.000;AC=47;AF=0.904;AN=52;BaseQRankSum=-4.698;DP=498;FS=0.000;HRun=0;HaplotypeScore=148.4725;InbreedingCoeff=0.2671;MQ=62.05;MQ0=6;MQRankSum=-0.959;QD=16.61;ReadPosRankSum=-0.569;VQSLOD=4.0685;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:24:14.58:337,15,0	1/1:10,0:10:3.01:75,3,0	./.	./.	1/1:21,0:21:12.02:282,12,0	1/1:21,0:20:13.85:499,14,0	0/1:15,0:15:16.71:112,0,17	1/1:27,0:27:16.54:279,17,0	1/1:8,0:8:6.02:160,6,0	1/1:17,5:23:28.27:611,28,0	1/1:26,0:25:3.01:63,3,0	1/1:13,0:13:2.88:95,3,0	1/1:20,0:19:21.07:576,21,0	1/1:14,0:14:3.01:116,3,0	0/0:8,0:14:3.01:0,3,56	1/1:9,0:9:5.85:136,6,0	0/0:14,0:14:19.62:0,20,333	1/1:14,0:14:11.78:272,12,0	1/1:12,0:12:3.01:45,3,0	1/1:12,0:13:12.04:416,12,0	1/1:19,0:16:3.01:82,3,0	1/1:19,0:19:17.93:570,18,0	1/1:25,0:23:19.58:883,20,0	1/1:19,0:19:5.61:212,6,0	1/1:7,5:16:0.08:224,0,0	1/1:14,0:14:15.05:456,15,0	1/1:17,7:29:9.03:334,9,0	1/1:1,4:6:3.01:122,3,0
chr10	25528752	.	GTGT	G	107.47	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.517;DP=460;FS=1.435;HRun=0;HaplotypeScore=108.2301;InbreedingCoeff=0.7192;MQ=57.48;MQ0=9;MQRankSum=-0.930;QD=11.94;ReadPosRankSum=1.819;VQSLOD=3.1156;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:25:20.13:0,20,385	0/0:8,0:8:10.85:0,11,159	0/0:19,0:8:24.06:0,24,282	0/0:18,0:10:30.08:0,30,405	0/0:25,0:25:51.17:0,51,827	0/0:20,0:19:24.08:0,24,377	0/0:14,0:14:24.96:0,25,370	0/0:19,0:19:54.18:0,54,858	0/0:12,0:12:24.08:0,24,339	0/0:21,0:20:55.02:0,55,883	0/0:19,0:18:17.82:0,18,289	0/0:8,0:8:15.05:0,15,218	0/0:12,0:11:21.07:0,21,387	0/0:12,0:12:9.03:0,9,131	0/0:16,0:16:21.28:0,21,333	0/0:10,0:10:15.05:0,15,249	1/1:3,6:9:21.02:199,21,0	0/0:15,0:15:24.21:0,24,347	0/0:19,0:17:51.12:0,51,684	0/0:21,0:21:39.12:0,39,530	0/0:16,0:16:27.09:0,27,410	0/0:20,0:20:27.09:0,27,392	0/0:25,0:23:39.13:0,39,641	0/0:17,0:17:19.61:0,20,286	0/0:13,0:13:12.04:0,12,178	0/0:15,0:15:45.15:0,45,780	0/0:26,0:26:39.09:0,39,582	0/0:5,0:5:3.01:0,3,55
chr10	25529030	.	T	TC	691.30	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-0.564;DP=481;FS=1.848;HRun=3;HaplotypeScore=69.3840;InbreedingCoeff=0.9430;MQ=71.87;MQ0=0;MQRankSum=-2.294;QD=30.06;ReadPosRankSum=0.919;VQSLOD=3.4402;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,21:23:58.43:786,58,0	0/0:7,0:7:18.06:0,18,216	0/0:9,0:9:21.06:0,21,241	0/0:9,0:9:18:0,18,145	0/0:22,0:22:60.15:0,60,696	0/0:19,0:19:54.17:0,54,648	0/0:14,0:14:33.09:0,33,385	0/0:33,0:33:87.26:0,87,1044	0/0:25,0:25:72.21:0,72,852	0/0:15,0:15:39.12:0,39,468	0/0:21,0:21:63.10:0,63,728	0/0:18,0:18:51.16:0,51,612	0/0:16,0:16:48.12:0,48,552	0/0:15,0:15:45.14:0,45,540	0/0:16,0:16:45.14:0,45,540	0/0:8,0:8:24.07:0,24,288	0/0:20,0:20:57.16:0,57,671	0/0:9,0:9:24.07:0,24,288	0/0:10,0:10:27.06:0,27,306	0/0:17,0:17:51.08:0,51,582	0/0:24,0:24:72.20:0,72,851	0/0:13,0:13:36.11:0,36,431	0/0:20,0:20:60.18:0,60,711	0/0:20,0:20:60.18:0,60,718	0/0:10,0:10:21.06:0,21,252	0/0:23,0:23:66.19:0,66,780	0/0:39,0:39:99:0,105,1236	0/0:6,0:6:12.04:0,12,144
chr10	25529217	.	C	CT	7556.12	PASS	AB=0.557;AC=41;AF=0.732;AN=56;BaseQRankSum=-7.980;DP=414;FS=7.007;HRun=10;HaplotypeScore=45.5829;InbreedingCoeff=0.5868;MQ=77.81;MQ0=0;MQRankSum=1.912;QD=22.09;ReadPosRankSum=2.271;VQSLOD=5.6788;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:23.23:0,23,160	0/1:2,5:8:6.69:125,0,7	0/0:12,0:11:5.84:0,6,43	0/0:10,0:11:6.62:0,7,45	1/1:3,15:18:33.08:352,33,0	0/1:1,10:11:0.58:200,0,1	1/1:2,8:11:26.90:270,27,0	1/1:6,18:24:53.99:550,54,0	0/1:5,10:15:8.79:211,0,9	1/1:3,14:17:39.09:409,39,0	1/1:3,24:27:15.39:603,15,0	1/1:2,7:9:15.04:160,15,0	1/1:0,8:8:15.04:160,15,0	1/1:2,7:9:21.05:223,21,0	0/0:18,0:18:50.91:0,51,414	0/1:2,8:10:3.59:171,0,4	0/0:20,0:20:47.92:0,48,390	1/1:4,14:18:33.06:341,33,0	1/1:3,18:23:56.97:587,57,0	1/1:3,20:24:59.98:622,60,0	1/1:0,5:5:15.04:160,15,0	0/1:1,7:8:3.55:171,0,4	1/1:4,14:18:14.48:360,14,0	1/1:0,7:7:21.05:224,21,0	1/1:1,14:15:17.46:391,17,0	1/1:3,19:22:32.45:527,32,0	1/1:5,19:25:25.64:513,26,0	1/1:1,9:10:21.05:224,21,0
chr10	25529648	.	TA	T	805.79	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.733;DP=471;FS=6.922;HRun=8;HaplotypeScore=42.6489;InbreedingCoeff=0.9443;MQ=78.86;MQ0=0;MQRankSum=-2.738;QD=22.38;ReadPosRankSum=-2.830;VQSLOD=2.4097;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:6:12.04:0,12,145	0/0:10,0:10:30.08:0,30,351	0/0:13,0:13:32.84:0,33,373	0/0:10,0:10:21.06:0,21,254	0/0:28,0:29:78.11:0,78,921	0/0:22,0:22:63.17:0,63,740	0/0:11,0:11:24.06:0,24,277	1/1:4,32:36:96.07:901,96,0	0/0:19,0:19:57.16:0,57,677	0/0:22,0:22:60.18:0,60,716	0/0:20,0:20:51.15:0,51,606	0/0:13,0:13:39.11:0,39,460	0/0:22,0:22:63.19:0,63,761	0/0:20,0:20:57.14:0,57,661	0/0:17,0:17:51.14:0,51,595	0/0:14,0:14:42.13:0,42,507	0/0:8,0:8:21.06:0,21,254	0/0:10,0:10:27.06:0,27,311	0/0:19,0:19:54.16:0,54,643	0/0:26,0:26:72.22:0,72,870	0/0:14,0:14:42.12:0,42,497	0/0:16,0:16:36.09:0,36,414	0/0:16,0:16:45.14:0,45,544	0/0:7,0:7:18.04:0,18,206	0/0:18,0:18:48.14:0,48,575	0/0:24,0:24:66.20:0,66,797	0/0:23,0:23:63.12:0,63,719	0/0:6,0:6:18.06:0,18,217
chr10	25529897	.	CTT	C	10566.09	PASS	AB=0.746;AC=48;AF=0.857;AN=56;BaseQRankSum=-6.079;DP=549;FS=6.388;HRun=12;HaplotypeScore=85.2173;InbreedingCoeff=0.7238;MQ=78.35;MQ0=4;MQRankSum=-3.970;QD=21.30;ReadPosRankSum=5.275;VQSLOD=4.3696;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,24:29:65.58:634,66,0	1/1:8,11:19:29.11:304,29,0	0/1:20,2:21:7.38:7,0,466	0/0:17,0:17:42.05:0,42,509	1/1:3,17:20:48.08:488,48,0	1/1:3,15:18:32.72:388,33,0	1/1:1,14:15:39.08:396,39,0	1/1:12,29:41:84.09:849,84,0	1/1:1,20:22:53.86:531,54,0	1/1:4,20:24:57.06:572,57,0	1/1:1,24:25:59.83:662,60,0	1/1:6,24:29:34.81:554,35,0	1/1:2,18:19:35.84:351,36,0	1/1:2,16:18:48.10:488,48,0	0/0:15,0:19:52.62:0,53,662	1/1:0,19:19:51.12:519,51,0	0/0:1,0:17:32.32:0,32,113	1/1:0,5:5:12.03:122,12,0	1/1:2,8:11:17.10:234,17,0	1/1:4,19:24:50.83:571,51,0	1/1:0,7:9:20.52:176,21,0	0/1:3,8:12:29.95:160,0,30	1/1:1,19:21:41.54:479,42,0	1/1:1,16:17:45.09:458,45,0	1/1:2,13:15:33.06:336,33,0	1/1:4,17:21:51.10:519,51,0	1/1:4,19:24:53.84:531,54,0	1/1:3,7:13:20.93:238,21,0
chr10	25530980	.	AGG	A	8468.98	PASS	AC=46;AF=0.852;AN=54;BaseQRankSum=4.274;DP=525;FS=4.051;HRun=11;HaplotypeScore=101.1235;InbreedingCoeff=0.8534;MQ=70.09;MQ0=0;MQRankSum=-1.926;QD=19.16;ReadPosRankSum=4.372;VQSLOD=4.1826;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,0:35:65.68:285,66,0	1/1:1,9:10:27:271,27,0	0/0:19,0:17:12.91:0,13,434	0/0:14,0:13:17.03:0,17,195	1/1:7,20:27:60.58:625,61,0	1/1:6,30:36:75.65:795,76,0	1/1:4,13:17:30.04:308,30,0	./.	1/1:4,10:14:33.06:342,33,0	1/1:12,13:25:36.49:369,36,0	1/1:5,10:16:3.16:287,3,0	1/1:2,17:19:39.09:408,39,0	1/1:9,13:22:37.24:407,37,0	1/1:2,17:19:51.12:532,51,0	0/0:18,0:20:47.59:0,48,649	1/1:5,21:27:36.21:531,36,0	0/0:9,1:29:16.01:0,16,122	1/1:2,6:8:4.78:146,5,0	1/1:7,10:18:35.74:366,36,0	1/1:25,1:26:38.71:352,39,0	1/1:4,9:14:26.80:264,27,0	1/1:3,12:15:36.04:365,36,0	1/1:6,10:16:39.47:389,39,0	1/1:17,0:17:5.99:55,6,0	1/1:6,7:13:18.44:239,18,0	1/1:4,15:19:42.88:438,43,0	1/1:2,22:24:60.14:631,60,0	1/1:1,3:4:6.01:63,6,0
chr10	25530993	.	GTC	G	9563.86	PASS	AB=1.000;AC=45;AF=0.833;AN=54;BaseQRankSum=4.840;DP=519;FS=1.522;HRun=0;HaplotypeScore=102.8313;InbreedingCoeff=0.8700;MQ=69.17;MQ0=0;MQRankSum=-4.819;QD=22.19;ReadPosRankSum=7.084;VQSLOD=4.9958;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:31,1:32:78.80:501,79,0	1/1:11,0:11:23.21:251,23,0	0/0:22,0:19:34.34:0,34,743	0/0:14,0:13:21.74:0,22,401	1/1:21,2:23:61.87:658,62,0	1/1:33,0:33:73.94:783,74,0	1/1:16,1:17:30.54:323,31,0	./.	1/1:15,1:16:34.03:383,34,0	1/1:20,1:21:39.47:440,39,0	1/1:14,0:14:27.32:315,27,0	1/1:22,0:22:39.82:467,40,0	1/1:16,1:17:35.99:421,36,0	1/1:19,0:19:57.13:634,57,0	0/0:23,0:23:60.20:0,60,1041	1/1:27,0:27:59.84:597,60,0	0/0:29,0:29:77.15:0,77,1019	0/1:12,0:12:0.90:140,0,1	1/1:25,1:26:52.54:521,53,0	1/1:3,18:21:35.92:435,36,0	1/1:12,0:13:32.93:333,33,0	1/1:14,1:15:30.34:409,30,0	1/1:12,2:14:39.10:440,39,0	1/1:0,16:16:6.02:85,6,0	1/1:12,1:12:26.87:246,27,0	1/1:19,0:19:45.55:455,46,0	1/1:26,1:27:65.62:660,66,0	1/1:3,0:3:6.02:67,6,0
chr10	25531347	.	C	CA	26282.77	PASS	AC=46;AF=0.852;AN=54;BaseQRankSum=-12.263;DP=707;FS=0.000;HRun=0;HaplotypeScore=64.8870;InbreedingCoeff=0.9983;MQ=72.72;MQ0=1;MQRankSum=-7.298;QD=44.25;ReadPosRankSum=5.231;VQSLOD=4.8413;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,62:62:99:2781,175,0	1/1:0,9:9:24.08:384,24,0	0/0:32,0:32:90.29:0,90,1226	0/0:31,0:30:71.38:0,71,987	1/1:0,42:42:99:1865,117,0	1/1:0,25:25:69.24:1103,69,0	1/1:0,22:22:66.23:1055,66,0	./.	1/1:1,29:30:75.26:1198,75,0	1/1:0,26:26:78.25:1223,78,0	1/1:0,20:20:57.19:911,57,0	1/1:0,18:18:51.17:815,51,0	1/1:0,25:25:72.25:1151,72,0	1/1:0,25:25:75.26:1199,75,0	0/0:23,0:23:66.21:0,66,907	1/1:0,16:16:48.16:767,48,0	0/0:27,0:27:78.26:0,78,1091	1/1:0,16:16:48.16:759,48,0	1/1:1,21:22:59.73:933,60,0	1/1:2,37:39:96.33:1535,96,0	1/1:2,28:30:75.26:1199,75,0	1/1:1,28:29:78.27:1247,78,0	1/1:0,33:33:84.14:1342,84,0	1/1:1,30:31:90.31:1438,90,0	1/1:0,21:21:63.21:1007,63,0	1/1:0,26:26:75.23:1173,75,0	1/1:0,19:19:54.18:863,54,0	1/1:0,8:8:21.07:335,21,0
chr10	25533561	.	A	AT	659.49	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-5.746;DP=654;FS=1.531;HRun=9;HaplotypeScore=61.6839;InbreedingCoeff=0.9163;MQ=74.77;MQ0=0;MQRankSum=2.375;QD=21.98;ReadPosRankSum=-5.329;VQSLOD=1.9403;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:56.98:0,57,495	0/0:12,0:12:32.99:0,33,286	0/0:9,0:9:11.87:0,12,147	0/0:18,0:18:10.15:0,10,204	0/0:35,0:35:89.96:0,90,781	0/0:24,0:24:59.95:0,60,514	0/0:14,0:14:41.96:0,42,356	1/1:7,23:30:69.17:754,69,0	0/0:30,0:30:80.89:0,81,685	0/0:40,0:40:99:0,111,961	0/0:21,0:21:53.96:0,54,469	0/0:14,0:14:35.98:0,36,313	0/0:13,0:13:32.99:0,33,286	0/0:24,0:24:65.96:0,66,569	0/0:29,0:29:56.58:0,57,644	0/0:25,0:25:62.94:0,63,543	0/0:15,0:15:32.97:0,33,286	0/0:7,0:7:18:0,18,156	0/0:22,0:22:47.96:0,48,417	0/0:45,0:45:99:0,114,980	0/0:22,0:22:62.96:0,63,542	0/0:25,1:26:26.81:0,27,462	0/0:37,0:37:78.93:0,79,859	0/0:24,0:23:65.95:0,66,566	0/0:21,1:22:23.80:0,24,436	0/0:30,0:30:83.94:0,84,722	0/0:34,0:34:77.90:0,78,667	0/0:10,0:10:26.98:0,27,234
chr10	25533811	.	T	TCTCTCTCTCTCTCTCTC	7562.24	PASS	AB=0.961;AC=29;AF=0.518;AN=56;BaseQRankSum=6.414;DP=703;FS=9.383;HRun=0;HaplotypeScore=358.7908;InbreedingCoeff=-0.1978;MQ=52.59;MQ0=1;MQRankSum=-0.037;QD=13.60;ReadPosRankSum=0.044;VQSLOD=1.9477;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:20,0:21:12.17:245,0,12	0/1:19,0:18:20.38:394,0,20	0/0:18,0:14:23.58:0,24,381	0/0:31,0:19:24.55:0,25,583	1/1:27,0:29:22.89:213,23,0	0/1:32,2:33:26.36:684,0,26	0/1:22,0:20:9.98:10,0,26	0/0:34,0:34:98.61:0,99,2166	1/1:25,0:26:24.59:196,25,0	0/1:31,0:32:99:743,0,156	0/1:28,0:28:32.92:33,0,49	1/1:25,1:23:4.19:168,4,0	1/1:19,1:20:9.44:911,9,0	0/1:25,1:27:54.67:56,0,55	0/0:44,0:44:99:0,132,4430	1/1:28,1:26:8.60:175,9,0	0/0:20,0:20:59.21:0,59,2235	0/1:15,1:16:46.02:470,0,46	0/1:20,0:19:91.47:442,0,91	0/1:34,0:33:8.67:215,0,9	0/1:22,0:21:13.34:58,0,13	0/1:19,1:20:9.28:152,0,9	0/1:29,1:29:1.86:375,0,2	0/1:13,0:13:6.03:16,0,6	1/1:23,0:23:4.19:67,4,0	0/1:14,1:14:64.42:601,0,64	0/1:34,2:35:64.20:1173,0,64	0/1:6,0:6:26.89:167,0,27
chr10	25534028	.	T	TCC	26668.72	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-11.334;DP=581;FS=0.913;HRun=0;HaplotypeScore=57.1538;InbreedingCoeff=0.9942;MQ=70.78;MQ0=0;MQRankSum=-4.575;QD=53.99;ReadPosRankSum=5.515;VQSLOD=5.5559;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,25:26:69.24:1402,69,0	1/1:0,10:10:27.09:549,27,0	0/0:11,0:11:27.94:0,28,417	0/0:8,0:8:21.07:0,21,324	1/1:0,27:27:66.18:1296,66,0	1/1:0,28:28:75.26:1523,75,0	1/1:0,18:18:45.15:915,45,0	0/0:29,0:29:84.26:0,84,1298	1/1:0,19:19:51.18:1036,51,0	1/1:1,22:23:66.23:1329,66,0	1/1:0,35:35:87.30:1765,87,0	1/1:0,9:9:27.09:543,27,0	1/1:0,14:14:42.14:853,42,0	1/1:0,18:18:51.18:1036,51,0	0/0:26,0:26:78.27:0,78,1273	1/1:1,18:19:48.16:970,48,0	0/0:13,0:13:39.13:0,39,622	1/1:0,9:9:24.08:488,24,0	1/1:1,20:21:63.18:1232,63,0	1/1:1,46:48:99:2639,132,0	1/1:0,17:18:48.16:976,48,0	1/1:1,20:23:60.21:1218,60,0	1/1:0,26:26:66.23:1341,66,0	1/1:0,18:18:51.16:1036,51,0	1/1:0,22:22:58.44:1161,58,0	1/1:0,34:35:99:2062,102,0	1/1:2,18:20:51.13:994,51,0	1/1:0,8:8:15.05:305,15,0
chr10	25535239	.	T	TA	20361.18	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-0.819;DP=671;FS=2.118;HRun=2;HaplotypeScore=96.1294;InbreedingCoeff=0.9830;MQ=71.83;MQ0=0;MQRankSum=-6.462;QD=38.42;ReadPosRankSum=5.607;VQSLOD=4.7782;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,25:27:69.23:993,69,0	1/1:1,11:12:36.10:498,36,0	0/0:23,0:24:63.17:0,63,754	0/0:28,0:27:64.25:0,64,759	1/1:1,27:28:78.26:1122,78,0	1/1:0,32:32:84.28:1210,84,0	1/1:6,20:26:60.20:855,60,0	0/0:34,0:34:96.27:0,96,1148	1/1:1,22:23:66.22:947,66,0	1/1:0,25:25:75.24:1061,75,0	1/1:1,27:28:81.14:1116,81,0	1/1:1,21:22:51.17:734,51,0	1/1:1,17:18:48.16:691,48,0	1/1:0,19:19:51.17:734,51,0	0/0:36,0:36:99:0,105,1289	1/1:2,20:22:54.18:777,54,0	0/0:18,1:19:8.11:0,8,551	1/1:1,18:19:51.17:734,51,0	1/1:2,14:16:45.12:624,45,0	1/1:1,28:29:78.22:1095,78,0	1/1:1,32:33:90.30:1295,90,0	1/1:3,22:25:57.19:820,57,0	1/1:1,22:23:60.20:864,60,0	1/1:0,16:16:48.16:691,48,0	1/1:0,30:30:87.29:1253,87,0	1/1:1,20:21:60.20:864,60,0	1/1:0,24:24:72.24:1037,72,0	1/1:1,11:12:24.08:345,24,0
chr10	25535651	.	AT	A	18747.86	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=12.378;DP=651;FS=3.206;HRun=1;HaplotypeScore=113.4202;InbreedingCoeff=0.9995;MQ=85.29;MQ0=0;MQRankSum=-5.317;QD=35.71;ReadPosRankSum=6.087;VQSLOD=4.4196;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,41:42:99:1440,111,0	1/1:0,18:18:48.16:623,48,0	0/0:21,0:20:53.55:0,54,837	0/0:21,0:22:55.66:0,56,946	1/1:1,14:15:39.13:506,39,0	1/1:0,19:19:48.16:623,48,0	1/1:7,19:26:75.16:900,75,0	0/0:21,0:21:63.21:0,63,1008	1/1:0,29:29:84.27:1090,84,0	1/1:0,23:23:69.22:883,69,0	1/1:0,26:26:66.19:839,66,0	1/1:1,21:22:63.20:818,63,0	1/1:0,16:16:48.16:623,48,0	1/1:0,22:22:66.21:857,66,0	0/0:31,0:31:93.29:0,93,1440	1/1:0,19:19:57.19:740,57,0	0/0:31,0:31:93.32:0,93,1482	1/1:0,19:19:57.19:740,57,0	1/1:1,11:12:36.09:450,36,0	1/1:0,15:15:42.14:545,42,0	1/1:2,44:46:99:1597,123,0	1/1:1,26:27:63.18:801,63,0	1/1:0,13:13:39.13:503,39,0	1/1:0,32:32:93.30:1206,93,0	1/1:0,20:20:54.18:701,54,0	1/1:0,27:27:80.85:1021,81,0	1/1:0,28:28:72.23:933,72,0	1/1:0,9:9:24.08:311,24,0
chr10	25535969	.	TGA	T	17505.76	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=13.591;DP=763;FS=2.522;HRun=0;HaplotypeScore=153.7877;InbreedingCoeff=0.9999;MQ=67.38;MQ0=4;MQRankSum=-5.371;QD=30.29;ReadPosRankSum=5.742;VQSLOD=6.5857;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,48:49:99:1419,108,0	1/1:1,16:16:39.13:512,39,0	0/0:44,0:33:69.17:0,69,1101	0/0:42,0:37:60.31:0,60,1126	1/1:3,27:30:78.06:924,78,0	1/1:2,24:26:63.16:800,63,0	1/1:3,24:27:60.19:784,60,0	0/0:34,0:34:84.28:0,84,1391	1/1:2,28:30:81.26:1064,81,0	1/1:4,24:28:69.22:906,69,0	1/1:1,18:19:51.08:631,51,0	1/1:2,25:27:57.18:744,57,0	1/1:1,26:27:57.19:749,57,0	1/1:1,28:29:69.16:885,69,0	0/0:31,0:31:90.31:0,90,1541	1/1:2,27:29:69.22:905,69,0	0/0:34,0:34:93.32:0,93,1594	1/1:2,20:21:57.19:749,57,0	1/1:4,15:19:48.14:616,48,0	1/1:2,16:18:38.93:413,39,0	1/1:2,22:24:55.92:746,56,0	1/1:7,19:26:45.10:572,45,0	1/1:2,19:21:48.15:622,48,0	1/1:2,27:28:72.23:946,72,0	1/1:1,21:22:48.16:631,48,0	1/1:1,23:24:69.18:873,69,0	1/1:2,19:21:45.14:581,45,0	1/1:0,14:14:33.11:433,33,0
chr10	25537058	.	AT	A	13117.05	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=9.988;DP=627;FS=2.502;HRun=8;HaplotypeScore=63.2975;InbreedingCoeff=0.9983;MQ=78.70;MQ0=0;MQRankSum=-2.853;QD=25.47;ReadPosRankSum=6.675;VQSLOD=4.8619;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:2,25:27:69.11:666,69,0	1/1:1,12:13:33.05:319,33,0	0/0:18,0:18:28.97:0,29,290	0/0:12,0:12:21.02:0,21,226	1/1:1,37:38:99:1043,108,0	1/1:2,22:24:60.10:579,60,0	1/1:2,13:15:36.06:348,36,0	0/0:40,0:40:99:0,111,1302	1/1:2,22:24:66.10:637,66,0	1/1:1,33:34:96.15:927,96,0	1/1:5,27:32:72.11:695,72,0	1/1:0,14:14:42.07:406,42,0	1/1:1,20:21:57.09:550,57,0	1/1:0,9:9:27.04:261,27,0	0/0:18,0:18:51.16:0,51,616	1/1:3,15:17:42.07:406,42,0	0/0:24,0:24:54.11:0,54,624	1/1:1,10:11:30.05:290,30,0	1/1:4,19:23:57.07:543,57,0	1/1:7,25:32:72.10:695,72,0	1/1:0,12:12:33.05:319,33,0	1/1:2,28:30:78.12:753,78,0	1/1:3,29:32:84.11:811,84,0	1/1:0,15:15:39.06:377,39,0	1/1:1,19:20:54.09:522,54,0	1/1:0,28:28:84.14:811,84,0	1/1:2,28:30:81.09:782,81,0	1/1:0,13:13:39.06:377,39,0
chr10	25538213	.	ACTGTATCC	A	542.39	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.842;DP=535;FS=0.000;HRun=0;HaplotypeScore=148.5869;InbreedingCoeff=0.9930;MQ=90.21;MQ0=0;MQRankSum=-4.413;QD=54.24;ReadPosRankSum=1.814;VQSLOD=3.5226;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:75.23:0,75,3228	0/0:8,0:8:24.08:0,24,1091	0/0:30,0:30:87.15:0,87,3359	0/0:15,0:15:42.14:0,42,1718	0/0:17,0:17:51.18:0,51,2307	0/0:21,0:21:60.19:0,60,2452	0/0:13,0:13:39.13:0,39,1768	0/0:21,0:21:63.18:0,63,2524	0/0:21,0:21:63.18:0,63,2325	0/0:23,0:23:69.24:0,69,3185	0/0:21,0:21:60.21:0,60,2585	0/0:22,0:22:66.19:0,66,2641	0/0:22,0:22:63.22:0,63,2685	0/0:20,0:20:60.16:0,60,2543	0/0:25,0:25:75.23:0,75,2900	0/0:18,0:18:54.16:0,54,2126	1/1:0,10:10:21.54:635,22,0	0/0:17,0:17:48.16:0,48,2039	0/0:27,0:27:75.24:0,75,2915	0/0:12,0:12:36.10:0,36,1440	0/0:26,0:26:78.23:0,78,3298	0/0:21,0:21:63.22:0,63,2725	0/0:14,0:14:42.12:0,42,1481	0/0:17,0:17:51.18:0,51,2328	0/0:9,0:9:27.01:0,27,926	0/0:17,0:17:51.18:0,51,2272	0/0:28,0:28:84.25:0,84,3443	0/0:15,0:15:45.15:0,45,1724
chr10	25538850	.	A	AT	23688.84	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-16.120;DP=780;FS=1.368;HRun=1;HaplotypeScore=68.7368;InbreedingCoeff=0.9991;MQ=87.02;MQ0=0;MQRankSum=-3.499;QD=40.01;ReadPosRankSum=5.128;VQSLOD=5.2896;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,114,1412	1/1:2,11:13:33.07:469,33,0	0/0:28,0:28:74.87:0,75,860	0/0:26,0:26:71.91:0,72,859	1/1:0,31:31:90.24:1321,90,0	1/1:0,34:34:90.30:1348,90,0	1/1:0,25:25:69.23:1034,69,0	0/0:32,0:32:90.27:0,90,1122	1/1:2,23:25:63.21:943,63,0	1/1:1,31:32:93.29:1353,93,0	1/1:0,19:19:54.10:772,54,0	1/1:1,31:32:84.28:1252,84,0	1/1:2,22:24:57.19:853,57,0	1/1:1,37:38:99:1616,108,0	0/0:30,0:30:87.28:0,87,1128	1/1:1,32:33:81.27:1213,81,0	0/0:33,0:33:99:0,99,1267	1/1:0,9:9:21.07:314,21,0	1/1:1,23:24:69.23:1032,69,0	1/1:1,42:43:99:1836,126,0	1/1:0,31:31:81.27:1212,81,0	1/1:1,25:26:66.14:938,66,0	1/1:0,33:33:93.32:1393,93,0	1/1:0,25:25:72.24:1078,72,0	1/1:1,21:22:54.18:809,54,0	1/1:2,23:25:69.19:971,69,0	1/1:0,34:34:90.20:1347,90,0	1/1:0,14:14:39.13:584,39,0
chr10	25541436	.	T	TG	11426.60	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-5.770;DP=519;FS=0.896;HRun=7;HaplotypeScore=76.1777;InbreedingCoeff=0.9883;MQ=87.24;MQ0=0;MQRankSum=-3.758;QD=28.21;ReadPosRankSum=4.731;VQSLOD=5.2265;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,16:20:51.16:615,51,0	1/1:2,6:8:15.05:181,15,0	0/0:25,0:25:58.25:0,58,535	0/0:19,0:19:38.43:0,38,353	1/1:10,13:23:45.13:531,45,0	1/1:3,19:22:57.13:662,57,0	1/1:3,11:14:39.09:448,39,0	0/0:27,0:27:75.10:0,75,716	1/1:5,14:19:47.61:530,48,0	1/1:3,13:16:39.12:471,39,0	1/1:1,16:17:45.14:542,45,0	1/1:5,17:22:54.07:619,54,0	1/1:8,14:22:28.67:520,29,0	1/1:2,13:15:39.12:471,39,0	0/0:26,0:26:72.11:0,72,695	1/1:1,15:16:48.11:563,48,0	0/0:17,0:17:36.04:0,36,348	1/1:3,8:11:27.08:319,27,0	1/1:6,12:18:33.10:399,33,0	1/1:6,20:26:63.19:761,63,0	1/1:3,26:29:66.20:797,66,0	1/1:2,20:22:48.15:578,48,0	1/1:4,16:21:54.16:643,54,0	1/1:7,14:21:42.12:498,42,0	1/1:4,7:11:27.07:316,27,0	1/1:3,13:16:39.12:471,39,0	1/1:3,9:12:30.05:347,30,0	1/1:0,4:4:12.04:145,12,0
chr10	25541499	.	G	GGAAGGAAGGAAGA	31797.66	PASS	AB=0.902;AC=25;AF=0.446;AN=56;BaseQRankSum=1.603;DP=760;FS=30.407;HRun=0;HaplotypeScore=439.7498;InbreedingCoeff=-0.8049;MQ=45.77;MQ0=17;MQRankSum=-9.572;QD=53.62;ReadPosRankSum=-2.489;VQSLOD=3.6479;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:22,1:21:92.09:1006,0,92	0/1:8,1:9:57.45:565,0,57	0/0:67,0:26:54.18:0,54,1119	0/0:79,0:25:60.29:0,60,1628	0/1:29,7:33:99:1083,0,120	0/1:28,3:30:99:1081,0,317	0/1:12,1:13:99:624,0,222	0/1:38,0:35:99:1405,0,1075	0/1:19,3:21:99:1063,0,226	0/1:26,4:29:99:2542,0,367	0/1:21,1:20:31.76:675,0,32	0/1:21,2:23:99:799,0,259	0/1:13,6:19:20.35:1644,0,20	0/1:14,4:18:54.99:1204,0,55	0/0:21,0:21:63.22:0,63,2332	0/1:20,5:26:99:1738,0,301	0/1:18,2:19:99:840,0,232	0/1:4,0:4:99:127,0,110	0/1:22,0:20:99:332,0,541	0/1:33,7:38:99:2342,0,179	0/1:8,0:7:46.71:47,0,101	0/1:28,3:30:99:1751,0,155	0/1:39,4:40:20.76:2189,0,21	0/1:14,0:14:99:463,0,131	0/1:24,5:29:68.85:1711,0,69	0/1:27,2:27:99:2541,0,424	0/1:32,3:33:99:3512,0,284	0/1:4,3:7:99:513,0,109
chr10	25541503	.	G	GGAAGGAAGGAAGAAGAA	41728.55	PASS	AB=0.997;AC=33;AF=0.589;AN=56;BaseQRankSum=1.110;DP=757;FS=16.220;HRun=0;HaplotypeScore=452.6654;InbreedingCoeff=-0.2518;MQ=44.56;MQ0=14;MQRankSum=-9.237;QD=70.25;ReadPosRankSum=3.391;VQSLOD=3.4316;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:21:1.81:1327,0,2	0/1:9,0:9:10.14:704,0,10	0/0:63,0:22:29.92:0,30,1227	0/0:80,0:25:57.46:0,57,1507	1/1:34,0:31:11.66:1478,12,0	0/1:30,0:29:93.34:1342,0,93	0/1:13,0:13:99:802,0,118	0/1:38,0:34:99:1965,0,257	0/1:22,0:21:85.82:1453,0,86	0/1:31,0:30:99:3271,0,205	1/1:24,0:22:40.74:1031,41,0	0/1:23,0:23:61.19:1225,0,61	1/1:21,0:21:14.10:2117,14,0	1/1:17,1:18:28.57:1629,29,0	0/0:20,0:20:57.20:0,57,2598	0/1:26,0:26:91.17:2133,0,91	0/1:17,1:18:99:939,0,138	0/1:4,0:4:36.79:392,0,37	0/1:21,0:20:99:901,0,205	1/1:40,0:38:12.14:2879,12,0	0/1:8,0:7:36.23:68,0,36	1/1:31,0:30:9.08:2293,9,0	1/1:43,1:41:34.92:2783,35,0	0/1:14,0:14:63.88:581,0,64	1/1:31,1:31:6.12:2111,6,0	0/1:29,0:27:99:3192,0,158	0/1:34,0:32:98.69:4391,0,99	0/1:7,0:7:15.76:719,0,16
chr10	25541540	.	AAAAG	A	14261.07	PASS	AB=0.628;AC=39;AF=0.696;AN=56;BaseQRankSum=7.054;DP=568;FS=52.451;HRun=0;HaplotypeScore=292.6076;InbreedingCoeff=0.2862;MQ=57.19;MQ0=2;MQRankSum=-9.978;QD=32.86;ReadPosRankSum=6.570;VQSLOD=2.9431;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,15:18:33.09:557,33,0	1/1:1,4:6:13.81:234,14,0	0/0:21,0:13:29.50:0,29,461	0/0:32,0:22:1.12:0,1,900	1/1:7,23:32:52.97:943,53,0	1/1:2,13:16:35.97:690,36,0	1/1:3,10:13:27.09:450,27,0	0/0:42,0:42:99:0,108,2513	0/1:8,9:20:47.25:394,0,47	1/1:9,18:27:68.95:1164,69,0	0/1:3,10:16:8.13:451,0,8	0/1:5,11:17:14.98:585,0,15	1/1:4,11:16:1.24:537,1,0	0/1:7,11:19:15.42:498,0,15	0/0:18,0:18:51.17:0,51,1252	0/1:5,12:19:22.95:582,0,23	0/0:18,0:21:52.99:0,53,1291	0/1:2,4:6:22.44:150,0,22	1/1:5,5:10:5.94:343,6,0	1/1:5,25:31:70.90:1215,71,0	1/1:2,1:3:2.13:52,2,0	0/1:8,13:23:27.83:666,0,28	1/1:8,20:28:56.98:1015,57,0	1/1:4,4:8:5.87:107,6,0	1/1:5,32:38:42.59:1285,43,0	1/1:5,27:32:59.47:1120,59,0	1/1:9,21:32:8.90:1012,9,0	1/1:0,4:4:12.04:214,12,0
chr10	25542279	.	T	TAAA	859.27	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=-0.355;DP=595;FS=5.630;HRun=9;HaplotypeScore=85.3916;InbreedingCoeff=0.7176;MQ=82.27;MQ0=1;MQRankSum=-2.040;QD=19.98;ReadPosRankSum=-1.059;VQSLOD=1.3581;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:31:83.69:0,84,991	0/0:5,0:5:15.04:0,15,176	0/0:26,0:25:47.23:0,47,564	0/1:19,0:18:3.05:3,0,239	0/0:37,0:37:96.30:0,96,1206	0/0:24,0:24:60.17:0,60,758	0/0:18,0:18:51.13:0,51,629	0/0:23,0:24:27.49:0,27,686	0/0:12,0:12:24.07:0,24,303	0/0:27,0:27:66.16:0,66,823	0/0:35,0:35:96.26:0,96,1172	0/0:13,0:13:30.07:0,30,379	0/0:18,0:18:48.11:0,48,591	0/0:15,0:15:42.13:0,42,528	0/0:25,0:25:72.17:0,72,856	0/0:23,0:23:60.09:0,60,687	1/1:5,17:24:51.17:954,51,0	0/0:9,0:9:18.02:0,18,227	0/0:18,0:18:48.14:0,48,594	0/0:37,0:37:99:0,102,1257	0/0:12,0:12:27.07:0,27,341	0/0:19,0:19:48.15:0,48,606	0/0:28,0:28:75.21:0,75,934	0/0:13,0:13:33.09:0,33,417	0/0:25,0:25:69.20:0,69,872	0/0:21,0:21:63.20:0,63,793	0/0:29,0:29:84.26:0,84,1058	0/0:8,0:8:19.60:0,20,263
chr10	25542451	.	CT	C	1307.33	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.926;DP=598;FS=3.183;HRun=1;HaplotypeScore=59.2067;InbreedingCoeff=0.9820;MQ=87.00;MQ0=0;MQRankSum=-1.954;QD=35.33;ReadPosRankSum=-3.873;VQSLOD=2.2906;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,120,1892	0/0:5,0:5:15.05:0,15,240	0/0:34,0:34:99:0,102,1536	0/0:19,0:19:54.15:0,54,779	0/0:25,0:25:75.23:0,75,1152	0/0:20,0:20:60.17:0,60,911	0/0:20,0:20:60.20:0,60,956	1/1:0,37:37:99:1402,102,0	0/0:22,0:22:66.21:0,66,1030	0/0:27,0:27:78.26:0,78,1226	0/0:28,0:28:84.26:0,84,1294	0/0:13,0:13:39.12:0,39,599	0/0:14,0:14:42.14:0,42,671	0/0:19,0:19:57.19:0,57,911	0/0:23,0:23:69.22:0,69,1080	0/0:14,0:14:42.14:0,42,670	0/0:16,0:16:48.13:0,48,720	0/0:12,0:12:33.07:0,33,499	0/0:19,0:19:57.19:0,57,893	0/0:28,0:28:78.27:0,78,1242	0/0:29,0:29:84.29:0,84,1338	0/0:14,0:14:39.12:0,39,600	0/0:22,0:22:63.20:0,63,976	0/0:23,0:23:69.24:0,69,1100	0/0:14,0:14:39.13:0,39,623	0/0:27,0:27:81.25:0,81,1231	0/0:26,0:24:78.27:0,78,1240	0/0:8,0:8:24.06:0,24,360
chr10	25542892	.	T	TA	6312.90	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=13.455;DP=479;FS=8.628;HRun=1;HaplotypeScore=149.8671;InbreedingCoeff=0.9464;MQ=63.23;MQ0=1;MQRankSum=-10.072;QD=17.25;ReadPosRankSum=2.907;VQSLOD=4.6755;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,11:21:31.54:230,32,0	1/1:1,6:7:19.54:109,20,0	0/0:15,0:13:36.12:0,36,462	0/0:25,0:25:65.42:0,65,789	1/1:10,10:20:45:383,45,0	1/1:11,11:22:48.47:348,48,0	1/1:3,3:6:5.69:54,6,0	0/0:29,0:29:84.26:0,84,1078	1/1:7,11:18:40.79:244,41,0	1/1:8,9:17:44.66:429,45,0	1/1:8,10:18:46.51:335,47,0	1/1:10,4:14:34.60:320,35,0	1/1:7,15:22:50.55:338,51,0	1/1:4,11:15:38.31:234,38,0	0/0:24,0:24:72.20:0,72,904	1/1:6,9:15:37.06:258,37,0	0/0:20,0:20:54.18:0,54,701	1/1:2,0:2:6:59,6,0	1/1:1,8:9:20.73:141,21,0	1/1:14,9:23:51.90:420,52,0	1/1:9,7:16:22.84:147,23,0	1/1:8,6:14:36.94:309,37,0	1/1:6,16:22:55.46:339,55,0	1/1:9,7:16:21.31:127,21,0	1/1:11,7:18:52.60:479,53,0	1/1:7,11:18:46.73:424,47,0	1/1:11,13:25:62.60:458,63,0	1/1:2,6:8:20.43:128,20,0
chr10	25542895	.	GT	G	4600.03	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=13.522;DP=431;FS=6.986;HRun=1;HaplotypeScore=141.0812;InbreedingCoeff=0.9117;MQ=64.72;MQ0=1;MQRankSum=-11.654;QD=14.15;ReadPosRankSum=4.020;VQSLOD=4.4623;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,10:18:27.28:166,27,0	1/1:1,6:7:18.11:88,18,0	0/0:15,0:13:36.12:0,36,555	0/0:22,0:22:66.18:0,66,953	1/1:7,10:17:36.13:253,36,0	1/1:10,11:21:40.17:243,40,0	1/1:0,3:3:2.37:8,2,0	0/0:27,0:27:81.26:0,81,1254	1/1:6,10:16:38.13:186,38,0	1/1:7,9:16:41.23:366,41,0	1/1:5,10:15:33.61:190,34,0	1/1:7,4:11:21.67:160,22,0	1/1:8,14:22:47.16:267,47,0	1/1:3,11:14:31.74:151,32,0	0/0:21,0:21:63.20:0,63,984	1/1:6,9:15:35.11:218,35,0	0/0:21,0:21:57.17:0,57,885	1/1:1,0:1:3.01:32,3,0	1/1:0,8:8:17.41:98,17,0	1/1:7,9:16:40.80:268,41,0	1/1:4,6:10:15.73:64,16,0	1/1:5,6:11:28.94:206,29,0	1/1:5,16:21:51.68:304,52,0	1/1:7,7:14:14.97:91,15,0	1/1:11,7:18:48.09:382,48,0	1/1:7,11:18:45.39:363,45,0	1/1:11,14:25:55.91:388,56,0	1/1:2,6:8:19.80:107,20,0
chr10	25543075	.	T	TATC	25751.94	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=2.057;DP=566;FS=0.910;HRun=0;HaplotypeScore=90.8095;InbreedingCoeff=0.9812;MQ=81.34;MQ0=0;MQRankSum=-5.831;QD=54.44;ReadPosRankSum=6.836;VQSLOD=6.9997;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,14:16:36.12:813,36,0	1/1:0,8:8:21.07:484,21,0	0/0:19,0:19:48.16:0,48,777	0/0:16,0:16:44.89:0,45,665	1/1:0,36:36:99:2349,102,0	1/1:3,18:22:39.13:898,39,0	1/1:1,7:9:15.05:334,15,0	0/0:30,0:30:90.30:0,90,1497	1/1:4,12:16:36.12:828,36,0	1/1:2,23:26:75.25:1613,75,0	1/1:2,29:31:75.26:1710,75,0	1/1:0,11:11:27.09:595,27,0	1/1:0,16:17:30.10:691,30,0	1/1:3,19:22:57.20:1305,57,0	0/0:16,0:16:42.13:0,42,687	1/1:0,21:21:57.20:1313,57,0	0/0:12,0:12:36.12:0,36,599	1/1:0,10:12:33.11:750,33,0	1/1:2,11:13:36.12:773,36,0	1/1:5,35:42:99:2341,105,0	1/1:2,10:12:27.09:622,27,0	1/1:6,22:28:63.22:1445,63,0	1/1:4,27:31:63.09:1432,63,0	1/1:1,13:14:33.11:760,33,0	1/1:3,21:24:63.22:1436,63,0	1/1:1,25:26:69.19:1464,69,0	1/1:0,27:28:69.24:1589,69,0	1/1:0,8:8:9.03:207,9,0
chr10	25543364	.	T	TAGAAA	18642.84	PASS	AB=1.000;AC=47;AF=0.839;AN=56;BaseQRankSum=-7.970;DP=483;FS=12.238;HRun=0;HaplotypeScore=71.9065;InbreedingCoeff=0.8477;MQ=61.46;MQ0=0;MQRankSum=-1.783;QD=45.36;ReadPosRankSum=4.043;VQSLOD=4.1963;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,13:21:45.02:1063,45,0	1/1:5,5:10:9.03:260,9,0	0/1:15,0:11:4.08:4,0,156	0/0:17,0:15:20.93:0,21,323	1/1:4,21:27:57.11:1419,57,0	1/1:3,15:21:24.97:698,25,0	1/1:3,17:21:36.12:1042,36,0	0/0:33,0:33:69.24:0,69,1302	1/1:6,5:14:12.04:348,12,0	1/1:6,19:28:63.21:1456,63,0	1/1:6,21:28:51.17:1411,51,0	1/1:1,7:8:18.06:522,18,0	1/1:2,9:11:15.05:436,15,0	1/1:2,12:14:33.11:958,33,0	0/0:15,0:15:27.08:0,27,486	1/1:3,4:9:12.04:348,12,0	0/0:7,0:7:18.01:0,18,275	1/1:3,4:8:12.04:348,12,0	1/1:6,10:19:39.10:888,39,0	1/1:2,15:17:42.01:995,42,0	1/1:2,8:14:19.62:526,20,0	1/1:4,21:28:57.19:1405,57,0	1/1:7,12:20:30.10:868,30,0	1/1:4,6:11:18.06:523,18,0	1/1:3,12:20:24.08:695,24,0	1/1:6,14:24:51.14:1298,51,0	1/1:1,15:15:29.69:870,30,0	1/1:0,6:6:9.03:261,9,0
chr10	25543726	.	ATAAAAT	A	15781.88	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=13.003;DP=360;FS=10.264;HRun=0;HaplotypeScore=117.6653;InbreedingCoeff=0.9284;MQ=57.79;MQ0=0;MQRankSum=-12.568;QD=59.11;ReadPosRankSum=3.545;VQSLOD=4.5454;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,18:18:36.12:903,36,0	1/1:0,7:7:21.07:519,21,0	0/0:8,0:8:21.01:0,21,587	0/0:5,0:5:15:0,15,371	1/1:0,14:14:33.11:843,33,0	1/1:0,13:12:33.11:836,33,0	1/1:0,5:5:15.05:381,15,0	0/0:42,0:42:99:0,126,4085	1/1:0,7:7:21.07:500,21,0	1/1:0,21:21:63.22:1583,63,0	1/1:0,11:11:27.01:567,27,0	1/1:0,11:10:24.08:614,24,0	1/1:0,10:9:24.08:596,24,0	1/1:0,14:14:30.10:767,30,0	0/0:13,0:13:39.13:0,39,1432	1/1:0,15:15:39.13:996,39,0	0/0:25,0:25:75.26:0,75,2735	1/1:0,2:2:6.02:154,6,0	1/1:0,15:15:45.05:873,45,0	1/1:0,13:13:30:600,30,0	1/1:0,6:6:9.03:208,9,0	1/1:0,4:4:9.03:230,9,0	1/1:0,13:13:33.07:767,33,0	1/1:0,10:10:11.86:250,12,0	1/1:0,11:11:33.11:835,33,0	1/1:0,20:19:54.16:1244,54,0	1/1:0,21:21:45.63:1134,46,0	1/1:0,6:6:15.05:384,15,0
chr10	25543958	.	AT	A	108.54	PASS	AC=10;AF=0.500;AN=20;BaseQRankSum=3.389;DP=92;FS=4.877;HRun=1;HaplotypeScore=20.0633;InbreedingCoeff=0.5513;MQ=68.25;MQ0=2;MQRankSum=-2.673;QD=15.51;ReadPosRankSum=-2.888;VQSLOD=2.1903;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,0:1:3.01:41,3,0	./.	0/0:15,2:12:21.15:0,21,456	0/0:18,2:6:2.86:0,3,147	./.	./.	1/1:0,2:1:3.01:42,3,0	0/0:2,0:2:6.02:0,6,94	1/1:0,2:2:3.01:42,3,0	1/1:0,1:1:3.01:42,3,0	./.	./.	./.	./.	0/0:13,0:13:36.12:0,36,562	./.	0/0:25,0:25:66.20:0,66,993	./.	./.	./.	./.	./.	./.	./.	./.	./.	1/1:0,1:1:3.01:42,3,0	./.
chr10	25544242	.	G	GA	91.12	PASS	AC=2;AF=0.25;AN=8;BaseQRankSum=1.096;DP=52;FS=1.808;HRun=9;HaplotypeScore=66.2178;MQ=97.47;MQ0=1;MQRankSum=-2.324;QD=11.39;ReadPosRankSum=-0.132;VQSLOD=2.7653;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:14,0:8:8.91:0,9,78	0/0:21,0:9:4.14:0,4,17	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	0/0:8,0:8:20.95:0,21,175	./.	1/1:1,7:7:15.04:166,15,0	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.
chr10	25544586	.	AG	A	140.78	PASS	AB=0.750;AC=9;AF=0.346;AN=26;BaseQRankSum=3.798;DP=161;FS=3.994;HRun=1;HaplotypeScore=20.7678;InbreedingCoeff=0.4027;MQ=36.01;MQ0=21;MQRankSum=-3.037;QD=11.73;ReadPosRankSum=-1.709;VQSLOD=1.2343;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:2,0:1:3.01:0,3,47	1/1:0,1:1:3.01:42,3,0	0/0:8,0:1:3.01:0,3,47	0/0:13,0:4:8.77:0,9,140	0/0:5,1:5:3.01:0,3,47	./.	./.	0/0:42,0:10:30.02:0,30,412	./.	./.	0/0:2,1:2:0:0,0,0	./.	./.	./.	0/0:27,0:27:78.24:0,78,1164	./.	0/0:33,0:33:78.24:0,78,1185	./.	1/1:0,1:1:3.01:42,3,0	0/1:4,2:5:35.66:36,0,41	./.	./.	./.	./.	./.	1/1:0,2:2:3.01:42,3,0	1/1:0,2:2:6.02:83,6,0	./.
chr10	25544820	.	CA	C	4871.58	PASS	AB=0.633;AC=42;AF=0.778;AN=54;BaseQRankSum=13.688;DP=360;FS=201.427;HRun=4;HaplotypeScore=146.1277;InbreedingCoeff=0.7750;MQ=57.64;MQ0=12;MQRankSum=-10.866;QD=22.98;ReadPosRankSum=4.070;VQSLOD=-0.2473;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,7:7:15.04:171,15,0	1/1:1,6:7:15.05:179,15,0	0/0:23,0:19:51.13:0,51,661	0/0:25,0:17:37.42:0,37,539	1/1:1,6:6:9.02:99,9,0	1/1:1,14:15:36.11:427,36,0	1/1:0,3:3:6.02:67,6,0	0/0:36,0:34:93.14:0,93,1212	1/1:2,9:10:27.08:310,27,0	1/1:1,13:12:36.11:431,36,0	1/1:1,8:8:9.03:108,9,0	1/1:1,5:6:15.04:177,15,0	1/1:2,8:9:21.06:251,21,0	1/1:1,8:9:21.06:251,21,0	0/0:32,0:32:93.24:0,93,1274	1/1:0,6:6:18.05:211,18,0	0/0:31,0:31:93.30:0,93,1281	0/1:3,6:9:59.92:192,0,60	1/1:5,5:9:12.04:144,12,0	1/1:1,14:15:21.06:249,21,0	1/1:1,7:8:9.02:100,9,0	1/1:0,15:14:30.09:355,30,0	1/1:1,10:11:9.03:108,9,0	0/1:2,2:4:0:0,0,0	1/1:1,8:9:15.05:180,15,0	1/1:1,12:12:36.11:431,36,0	1/1:1,13:14:36.11:431,36,0	./.
chr10	25545578	.	A	ACTAT	9954.69	PASS	AB=0.545;AC=43;AF=0.860;AN=50;BaseQRankSum=-4.210;DP=200;FS=0.000;HRun=0;HaplotypeScore=37.9417;InbreedingCoeff=0.6300;MQ=61.86;MQ0=1;MQRankSum=-3.585;QD=61.45;ReadPosRankSum=2.359;VQSLOD=6.1589;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,6:10:15.05:403,15,0	./.	0/0:10,0:8:23.93:0,24,350	0/0:11,0:10:20.09:0,20,498	1/1:1,3:4:9.03:242,9,0	1/1:1,4:5:6.02:162,6,0	1/1:2,11:13:24.08:638,24,0	1/1:7,17:25:66.21:1709,66,0	1/1:0,5:7:4.02:312,4,0	1/1:0,4:3:9.03:243,9,0	./.	1/1:0,7:7:18.06:486,18,0	1/1:0,8:8:21.07:557,21,0	1/1:1,4:4:9.03:243,9,0	0/0:16,0:16:45.13:0,45,791	1/1:0,5:5:12.04:324,12,0	1/1:2,6:8:21.07:559,21,0	1/1:1,13:14:38.96:985,39,0	1/1:3,5:8:21.07:529,21,0	1/1:0,2:2:6.02:161,6,0	1/1:1,7:10:15.05:405,15,0	./.	1/1:0,3:3:9.03:242,9,0	1/1:0,3:2:6.02:161,6,0	0/1:1,5:6:10.03:387,0,10	1/1:0,7:7:21.07:566,21,0	1/1:0,6:6:18.06:484,18,0	1/1:1,1:2:6.02:157,6,0
chr10	25545787	.	C	CATAT	2143.69	PASS	AC=12;AF=0.667;AN=18;BaseQRankSum=-4.342;DP=130;FS=5.194;HRun=0;HaplotypeScore=32.2143;MQ=93.55;MQ0=0;MQRankSum=-4.816;QD=36.33;ReadPosRankSum=-2.290;VQSLOD=2.2761;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:7,0:7:15.01:0,15,221	0/0:14,0:13:27.06:0,27,397	./.	1/1:2,0:2:3:25,3,0	./.	1/1:15,20:37:71.95:1476,72,0	./.	1/1:3,0:3:3.01:60,3,0	./.	./.	./.	./.	0/0:27,0:27:69.24:0,69,1209	./.	1/1:3,10:13:21.07:536,21,0	1/1:3,0:3:6.02:90,6,0	./.	./.	./.	./.	./.	./.	./.	./.	1/1:1,0:1:3.01:61,3,0	./.
chr10	25546193	.	CA	C	953.82	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.587;DP=661;FS=1.548;HRun=1;HaplotypeScore=62.9626;InbreedingCoeff=0.9619;MQ=85.06;MQ0=0;MQRankSum=-1.384;QD=38.15;ReadPosRankSum=0.765;VQSLOD=4.2144;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,126,1934	0/0:5,0:5:15.05:0,15,239	0/0:33,0:33:96.19:0,96,1424	0/0:20,0:20:47.09:0,47,742	0/0:26,0:26:78.26:0,78,1231	0/0:21,0:21:63.21:0,63,1006	0/0:22,0:22:60.36:0,60,950	0/0:31,0:31:93.30:0,93,1443	0/0:22,0:22:42.97:0,43,958	0/0:26,0:26:78.24:0,78,1164	0/0:19,0:19:57.18:0,57,881	0/0:25,0:25:75.24:0,75,1175	0/0:19,0:19:57.19:0,57,909	0/0:31,0:31:93.27:0,93,1414	0/0:26,0:26:78.27:0,78,1246	0/0:17,0:17:51.17:0,51,802	1/1:0,25:25:75.25:1049,75,0	0/0:5,0:5:15.05:0,15,240	0/0:23,0:22:66.22:0,66,1034	0/0:25,0:25:72.23:0,72,1115	0/0:33,0:33:96.25:0,96,1453	0/0:19,0:19:57.18:0,57,874	0/0:25,0:25:75.26:0,75,1191	0/0:38,0:38:99:0,114,1797	0/0:20,0:20:60.20:0,60,958	0/0:28,0:28:84.26:0,84,1297	0/0:29,0:28:81.28:0,81,1292	0/0:6,0:6:18.06:0,18,287
chr10	25546421	.	A	AT	18505.34	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-3.070;DP=582;FS=2.485;HRun=2;HaplotypeScore=70.2969;InbreedingCoeff=0.9948;MQ=83.51;MQ0=0;MQRankSum=-4.313;QD=38.39;ReadPosRankSum=5.710;VQSLOD=5.1706;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:1,30:31:81.27:1166,81,0	1/1:0,9:9:24.08:346,24,0	0/0:25,0:25:66.04:0,66,770	0/0:14,0:14:24.07:0,24,289	1/1:0,34:34:90.23:1266,90,0	1/1:0,27:27:75.25:1080,75,0	1/1:0,17:17:51.17:734,51,0	0/0:26,0:26:78.22:0,78,952	1/1:0,25:25:54.18:777,54,0	1/1:2,24:26:72.24:1036,72,0	1/1:1,22:23:66.18:912,66,0	1/1:0,20:20:51.17:734,51,0	1/1:2,15:17:42.14:604,42,0	1/1:0,17:17:48.16:691,48,0	0/0:15,0:15:45.13:0,45,544	1/1:0,10:10:24.08:346,24,0	0/0:20,0:20:57.18:0,57,706	1/1:0,12:12:36.12:518,36,0	1/1:1,15:16:48.16:682,48,0	1/1:0,30:30:84.28:1206,84,0	1/1:0,22:22:51.17:734,51,0	1/1:1,30:31:78.18:1097,78,0	1/1:0,19:19:57.19:820,57,0	1/1:1,23:24:60.20:864,60,0	1/1:0,20:20:51.17:734,51,0	1/1:0,14:14:42.14:603,42,0	1/1:1,31:32:93.31:1339,93,0	1/1:0,6:6:15.05:216,15,0
chr10	25547520	.	GTAAA	G	25519.31	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=10.923;DP=629;FS=0.378;HRun=0;HaplotypeScore=149.7618;InbreedingCoeff=0.9787;MQ=69.36;MQ0=2;MQRankSum=-10.477;QD=49.94;ReadPosRankSum=7.214;VQSLOD=5.4334;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:23:69.22:0,69,1828	1/1:1,10:11:27.09:523,27,0	0/0:16,0:16:42.14:0,42,1052	0/0:15,0:15:45.15:0,45,1151	1/1:1,21:22:57.20:1100,57,0	1/1:0,24:24:72.25:1395,72,0	1/1:1,17:18:48.16:930,48,0	0/0:32,0:32:96.33:0,96,2572	1/1:0,19:19:51.17:988,51,0	1/1:3,38:41:99:2129,111,0	1/1:1,34:35:93.32:1790,93,0	1/1:0,20:20:54.19:1046,54,0	1/1:3,20:23:57.20:1097,57,0	1/1:0,14:14:42.14:813,42,0	0/0:18,0:18:51.18:0,51,1396	1/1:3,23:26:60.21:1159,60,0	0/0:14,0:14:42.12:0,42,1090	1/1:0,2:2:6.02:116,6,0	1/1:3,10:13:30.09:539,30,0	1/1:2,33:35:87.30:1682,87,0	1/1:0,14:14:36.12:688,36,0	1/1:0,28:28:81.28:1562,81,0	1/1:0,35:34:81.28:1559,81,0	1/1:2,16:17:36.12:690,36,0	1/1:4,31:35:87.30:1685,87,0	1/1:1,28:29:84.27:1586,84,0	1/1:3,29:32:78.27:1511,78,0	1/1:0,17:17:48.16:930,48,0
chr10	25548440	.	GAAGAGAGA	G	7655.09	PASS	AB=0.625;AC=43;AF=0.768;AN=56;BaseQRankSum=6.338;DP=341;FS=36.456;HRun=0;HaplotypeScore=91.3771;InbreedingCoeff=0.7127;MQ=68.23;MQ0=2;MQRankSum=-8.256;QD=36.63;ReadPosRankSum=4.484;VQSLOD=2.8434;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:45.14:0,45,1592	1/1:1,3:4:5.98:99,6,0	0/0:29,0:21:35.83:0,36,924	0/0:42,0:26:47.97:0,48,1453	1/1:4,7:11:14.97:236,15,0	1/1:1,8:9:15.05:394,15,0	1/1:9,8:17:24.08:623,24,0	0/0:19,0:19:43.39:0,43,1577	1/1:2,7:9:15.05:386,15,0	1/1:6,13:19:39.09:902,39,0	1/1:5,7:12:6.02:158,6,0	1/1:2,10:12:27.09:694,27,0	1/1:3,7:10:12.04:315,12,0	1/1:2,3:5:9.03:236,9,0	0/0:3,0:3:3.01:0,3,53	1/1:2,5:7:9.03:237,9,0	0/0:20,0:20:45.12:0,45,1503	0/1:2,3:5:46.62:149,0,47	1/1:3,5:7:15.05:318,15,0	1/1:0,7:7:9.03:237,9,0	1/1:4,4:8:5.98:99,6,0	1/1:2,7:9:15.01:335,15,0	1/1:3,6:9:12.04:316,12,0	1/1:4,7:11:8.36:228,8,0	1/1:5,6:11:12.04:297,12,0	1/1:5,7:12:21.07:537,21,0	1/1:0,11:11:30.10:780,30,0	1/1:2,1:3:3.01:79,3,0
chr10	25550801	.	AT	A	877.14	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.994;DP=542;FS=11.255;HRun=4;HaplotypeScore=53.1541;InbreedingCoeff=0.9635;MQ=81.79;MQ0=0;MQRankSum=-2.709;QD=30.25;ReadPosRankSum=1.285;VQSLOD=3.0552;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,28:29:81.25:972,81,0	0/0:9,0:9:27.09:0,27,378	0/0:22,0:23:55.71:0,56,803	0/0:8,0:8:24.05:0,24,316	0/0:30,0:30:81.27:0,81,1133	0/0:29,0:29:81.27:0,81,1134	0/0:15,0:15:45.14:0,45,614	0/0:43,0:43:99:0,117,1605	0/0:20,0:20:57.19:0,57,798	0/0:18,0:18:51.17:0,51,714	0/0:20,0:20:60.19:0,60,822	0/0:14,0:14:42.14:0,42,588	0/0:18,0:18:51.17:0,51,714	0/0:21,0:21:63.21:0,63,881	0/0:27,0:27:78.26:0,78,1093	0/0:16,0:16:48.16:0,48,672	0/0:12,0:12:36.12:0,36,504	0/0:7,0:7:21.07:0,21,294	0/0:19,0:19:51.16:0,51,698	0/0:22,0:22:66.22:0,66,923	0/0:15,0:15:45.13:0,45,611	0/0:18,0:18:51.16:0,51,697	0/0:17,0:17:48.16:0,48,672	0/0:17,0:17:51.17:0,51,714	0/0:22,0:22:63.16:0,63,846	0/0:23,0:23:66.22:0,66,924	0/0:26,0:25:75.24:0,75,1031	0/0:4,0:4:12.04:0,12,168
chr10	25551016	.	CAACACACACACACA	C	1399.84	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=-6.223;DP=411;FS=0.000;HRun=0;HaplotypeScore=163.3584;InbreedingCoeff=-0.4059;MQ=63.59;MQ0=7;MQRankSum=1.448;QD=4.86;ReadPosRankSum=-1.766;VQSLOD=2.4808;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:27:27.78:28,0,1014	0/0:3,0:3:6.02:0,6,328	0/0:33,0:20:7.18:0,7,233	0/0:31,0:10:11:0,11,374	0/1:11,0:11:36.89:37,0,302	0/1:11,0:11:74.77:75,0,343	0/1:11,0:11:42.90:43,0,321	1/1:8,20:28:56.73:462,57,0	0/1:17,0:17:70.79:71,0,440	0/1:13,0:13:78.65:79,0,660	0/1:8,0:8:55.84:56,0,296	0/1:11,0:9:38.91:39,0,133	0/0:5,0:5:9.03:0,9,438	0/1:8,0:8:28.86:29,0,638	0/0:16,0:16:28.63:0,29,1373	0/0:6,0:6:6.02:0,6,283	0/1:13,0:13:60.78:61,0,673	0/1:16,0:15:99:116,0,298	0/0:14,0:13:6.06:0,6,1095	0/1:16,0:16:47.83:48,0,608	1/1:10,0:10:5.71:46,6,0	0/1:14,0:14:52.63:53,0,378	0/0:11,0:11:1.07:0,1,766	0/1:21,0:21:99:127,0,826	0/1:17,0:17:26.84:27,0,915	0/1:14,0:14:76.59:77,0,933	0/1:21,0:20:89.26:89,0,1062	0/0:4,0:4:3.01:0,3,151
chr10	25551691	.	GGAA	G	13639.42	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-0.288;DP=557;FS=14.227;HRun=0;HaplotypeScore=90.4836;InbreedingCoeff=0.9794;MQ=72.83;MQ0=1;MQRankSum=-4.731;QD=28.36;ReadPosRankSum=5.290;VQSLOD=3.7289;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:33,0:33:72.12:701,72,0	1/1:1,6:7:18.06:259,18,0	0/0:38,0:34:57.12:0,57,967	0/0:21,0:20:23.98:0,24,456	1/1:6,21:27:54.18:771,54,0	1/1:3,10:13:24.08:345,24,0	1/1:1,8:9:24.08:339,24,0	1/1:6,16:22:48.11:616,48,0	1/1:5,14:19:39.13:561,39,0	1/1:1,20:21:60.19:840,60,0	1/1:6,15:20:33.11:474,33,0	1/1:7,6:13:15.05:216,15,0	1/1:3,15:18:42.14:604,42,0	1/1:2,18:20:45.15:648,45,0	0/0:17,0:17:39.13:0,39,796	1/1:7,4:12:15.02:194,15,0	1/1:8,23:31:63.21:907,63,0	1/1:4,18:22:45.15:647,45,0	1/1:9,10:19:30.09:416,30,0	1/1:8,15:22:42.14:598,42,0	1/1:6,16:22:39.13:561,39,0	1/1:0,19:19:54.18:763,54,0	1/1:7,9:16:23.22:343,23,0	1/1:4,10:14:27.09:388,27,0	1/1:2,19:21:54.18:771,54,0	1/1:7,13:20:39.13:561,39,0	1/1:6,22:28:60.20:863,60,0	1/1:3,8:11:18.06:254,18,0
chr10	25551710	.	GAAT	G	5882	PASS	AB=0.998;AC=30;AF=0.536;AN=56;BaseQRankSum=13.828;DP=518;FS=10.103;HRun=0;HaplotypeScore=104.8641;InbreedingCoeff=-0.3585;MQ=62.48;MQ0=0;MQRankSum=-3.397;QD=12.87;ReadPosRankSum=13.273;VQSLOD=1.8325;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:0,37:37:72.25:1261,72,0	0/1:8,0:8:25.30:87,0,25	0/0:28,0:24:65.81:0,66,1195	0/0:15,0:14:39.12:0,39,693	0/1:25,0:25:32.71:282,0,33	0/1:14,0:14:57.31:124,0,57	0/1:12,0:12:56.34:119,0,56	0/1:28,0:28:99:142,0,244	0/1:16,0:16:5.58:209,0,6	0/1:23,0:23:19.03:287,0,19	1/1:16,0:15:10.50:192,11,0	0/1:7,0:7:7.24:76,0,7	0/1:17,0:17:2.62:227,0,3	0/1:22,0:22:29.67:235,0,30	0/0:18,0:18:53.95:0,54,1047	0/1:11,0:11:59.04:59,0,112	0/1:29,0:28:56:316,0,56	0/1:22,0:22:29.66:234,0,30	0/1:13,0:13:41.49:126,0,41	0/1:17,0:16:2.67:224,0,3	1/1:17,0:17:24.36:228,24,0	1/1:21,0:21:25.17:326,25,0	0/1:13,0:13:41.39:122,0,41	0/1:13,0:13:28.40:138,0,28	1/1:21,0:21:9.01:283,9,0	0/1:19,0:19:89.06:164,0,89	0/1:26,0:27:18.82:324,0,19	0/1:9,0:9:3.22:98,0,3
chr10	25551882	.	G	GCCAGA	29848.84	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-11.417;DP=482;FS=0.452;HRun=0;HaplotypeScore=73.7703;InbreedingCoeff=0.9759;MQ=89.71;MQ0=0;MQRankSum=-9.073;QD=74.62;ReadPosRankSum=4.709;VQSLOD=6.4539;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:72.19:0,72,1522	1/1:0,8:8:24.08:773,24,0	0/0:13,0:13:39.12:0,39,757	0/0:30,0:30:82.82:0,83,1712	1/1:0,14:18:45.07:1297,45,0	1/1:0,15:17:36.12:1161,36,0	1/1:1,18:26:42.14:1350,42,0	1/1:1,20:33:93.24:2239,93,0	1/1:1,18:19:48.15:1475,48,0	1/1:0,13:15:45.14:1293,45,0	1/1:1,15:17:39.13:1255,39,0	1/1:2,6:9:21.07:644,21,0	1/1:0,13:15:36.12:1161,36,0	1/1:0,10:14:33.11:1059,33,0	0/0:14,0:14:42.14:0,42,895	1/1:0,13:13:33.11:1066,33,0	1/1:2,26:29:72.25:2324,72,0	1/1:0,6:7:15.05:484,15,0	1/1:0,13:14:42.14:1348,42,0	1/1:1,17:21:54.14:1652,54,0	1/1:1,9:12:21.07:676,21,0	1/1:0,9:12:24.08:772,24,0	1/1:0,13:14:29.47:967,29,0	1/1:0,23:24:57.20:1841,57,0	1/1:0,13:15:39.13:1237,39,0	1/1:0,16:17:48.16:1548,48,0	1/1:0,25:28:60.21:1936,60,0	1/1:0,3:3:9.03:290,9,0
chr10	25551956	.	CG	C	1600.76	PASS	AB=0.766;AC=46;AF=0.852;AN=54;BaseQRankSum=-2.731;DP=400;FS=24.303;HRun=13;HaplotypeScore=89.7671;InbreedingCoeff=0.1603;MQ=79.17;MQ0=4;MQRankSum=-0.284;QD=4.81;ReadPosRankSum=3.483;VQSLOD=0.5454;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:20:28.50:84,29,0	1/1:5,0:5:2.95:22,3,0	0/0:30,1:18:2.38:0,2,72	0/0:27,1:21:3.01:0,3,71	1/1:10,2:14:7.98:50,8,0	1/1:9,4:15:19.87:131,20,0	1/1:4,7:14:27.86:172,28,0	0/1:12,0:23:2.47:21,0,2	1/1:6,2:8:10.89:68,11,0	1/1:7,9:16:14.91:109,15,0	1/1:8,1:9:2.97:22,3,0	1/1:4,2:6:5.85:44,6,0	1/1:10,4:16:1.97:67,2,0	1/1:5,2:11:14.05:67,14,0	0/1:16,2:18:7.34:7,0,67	1/1:4,4:10:15.92:99,16,0	1/1:5,0:17:22.39:66,22,0	1/1:5,2:7:9.98:56,10,0	1/1:8,3:12:15.96:97,16,0	1/1:12,6:18:8.85:66,9,0	./.	1/1:7,3:12:10.71:66,11,0	1/1:4,2:7:4.99:28,5,0	1/1:11,9:21:25.97:181,26,0	0/1:11,5:17:18.04:38,0,18	1/1:7,2:9:3.86:24,4,0	1/1:17,3:21:16.73:107,17,0	0/1:4,2:6:18.22:38,0,18
chr10	25553491	.	GA	G	12406.90	PASS	AB=1.000;AC=51;AF=0.911;AN=56;BaseQRankSum=3.437;DP=584;FS=8.640;HRun=8;HaplotypeScore=60.1229;InbreedingCoeff=0.7799;MQ=79.00;MQ0=0;MQRankSum=-4.924;QD=22.72;ReadPosRankSum=3.006;VQSLOD=5.2784;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,20:23:51.08:491,51,0	1/1:3,8:11:21.03:203,21,0	0/0:19,0:19:45.10:0,45,494	0/1:14,0:13:18.64:19,0,212	1/1:2,31:33:93.07:886,93,0	1/1:7,29:36:78.04:741,78,0	1/1:2,15:17:30.05:289,30,0	1/1:5,27:32:78.08:745,78,0	1/1:3,14:17:42.06:405,42,0	1/1:1,25:26:72.12:695,72,0	1/1:5,18:23:54.08:520,54,0	1/1:1,14:15:30.05:289,30,0	1/1:1,21:22:60.10:579,60,0	1/1:1,16:17:36.06:347,36,0	0/0:19,0:19:54.17:0,54,652	1/1:3,17:20:51.08:492,51,0	1/1:2,15:17:39.06:377,39,0	1/1:0,11:11:27.04:261,27,0	1/1:4,20:24:60.07:570,60,0	1/1:3,30:33:86.74:810,87,0	1/1:2,9:11:24.04:232,24,0	1/1:0,11:11:26.94:247,27,0	1/1:1,19:20:44.68:434,45,0	1/1:0,17:17:48.08:463,48,0	1/1:1,25:26:66.05:637,66,0	1/1:2,29:31:84.07:793,84,0	1/1:2,27:29:68.95:650,69,0	1/1:0,10:10:24.04:232,24,0
chr10	25553650	.	TAGACAGAC	T	5404.25	PASS	AB=0.962;AC=41;AF=0.732;AN=56;BaseQRankSum=3.796;DP=543;FS=1.253;HRun=0;HaplotypeScore=268.3647;InbreedingCoeff=0.2485;MQ=41.87;MQ0=8;MQRankSum=-1.682;QD=11.43;ReadPosRankSum=-0.731;VQSLOD=3.2295;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:39,0:39:19.11:522,0,19	1/1:8,4:13:8.69:110,9,0	0/0:7,0:5:15.05:0,15,253	0/0:9,0:4:6.41:0,6,147	1/1:20,6:26:8.59:148,9,0	1/1:15,3:18:24.05:375,24,0	1/1:17,0:16:5:66,5,0	1/1:40,0:36:24.08:322,24,0	1/1:11,3:14:12.04:216,12,0	0/1:22,0:24:7.80:604,0,8	0/1:24,0:24:1.96:191,0,2	1/1:14,2:16:12.04:230,12,0	1/1:11,4:15:15.03:201,15,0	1/1:8,3:11:5.94:100,6,0	0/0:27,0:27:66.20:0,66,1361	1/1:10,4:14:15.04:285,15,0	1/1:10,0:10:1.82:5,2,0	0/1:14,0:14:98.08:98,0,121	1/1:13,1:12:18.53:321,19,0	1/1:28,8:36:20.32:246,20,0	1/1:19,0:19:9.01:118,9,0	1/1:17,2:19:15.05:324,15,0	1/1:10,4:14:6.02:110,6,0	1/1:7,1:8:2.67:24,3,0	0/0:26,0:27:8.94:0,9,214	0/1:30,0:29:99:500,0,273	0/1:22,0:26:79.82:187,0,80	0/1:10,0:8:53.89:100,0,54
chr10	25553706	.	CAGAT	C	13042.36	PASS	AB=0.591;AC=47;AF=0.839;AN=56;BaseQRankSum=5.745;DP=627;FS=9.417;HRun=0;HaplotypeScore=219.4289;InbreedingCoeff=0.7538;MQ=61.57;MQ0=0;MQRankSum=-4.779;QD=25.57;ReadPosRankSum=1.982;VQSLOD=3.4289;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:54.18:0,54,1332	1/1:0,6:6:12.04:207,12,0	0/0:27,0:25:52.66:0,53,1225	0/0:24,0:18:48.12:0,48,1003	1/1:1,29:30:32.91:583,33,0	1/1:3,21:24:39.13:678,39,0	1/1:7,5:12:8.76:158,9,0	1/1:10,29:39:72.39:1482,72,0	1/1:2,20:22:48.10:804,48,0	1/1:7,24:31:63.70:1226,64,0	1/1:5,24:29:30.04:534,30,0	1/1:1,20:21:27.09:474,27,0	1/1:0,17:17:18.06:318,18,0	1/1:2,14:16:15.05:259,15,0	0/0:37,0:37:99:0,102,2498	1/1:4,18:22:30.04:524,30,0	1/1:2,9:11:6.02:106,6,0	0/1:4,9:13:84.09:289,0,84	1/1:2,13:15:36.12:641,36,0	1/1:2,26:28:26.81:474,27,0	1/1:7,12:19:6.02:107,6,0	1/1:2,17:19:18.06:306,18,0	1/1:1,22:23:20.33:370,20,0	1/1:3,7:10:2.27:52,2,0	1/1:0,29:29:30.04:524,30,0	1/1:1,28:29:84.23:1355,84,0	1/1:4,19:23:33.11:587,33,0	1/1:2,20:22:57.19:986,57,0
chr10	25554797	.	G	GT	13657.74	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-10.319;DP=515;FS=3.200;HRun=6;HaplotypeScore=48.2883;InbreedingCoeff=0.9849;MQ=82.60;MQ0=0;MQRankSum=-4.966;QD=31.33;ReadPosRankSum=3.394;VQSLOD=5.2863;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:78.16:0,78,790	1/1:1,7:8:22.31:267,22,0	0/0:20,0:19:13.72:0,14,268	0/0:21,0:20:33.36:0,33,278	1/1:6,21:27:60.19:755,60,0	1/1:1,17:18:45.14:566,45,0	1/1:2,10:12:21.07:264,21,0	1/1:3,23:26:69.19:839,69,0	1/1:0,14:14:33.11:415,33,0	1/1:1,26:27:78.24:969,78,0	1/1:0,18:18:54.17:679,54,0	1/1:0,14:14:33.11:415,33,0	1/1:2,16:18:48.15:604,48,0	1/1:1,11:12:27.09:340,27,0	0/0:10,0:10:27.06:0,27,275	1/1:1,10:11:30.10:377,30,0	1/1:1,15:16:39.12:491,39,0	1/1:3,22:25:60.19:754,60,0	1/1:0,13:13:39.11:478,39,0	1/1:2,26:28:78.20:958,78,0	1/1:0,8:8:21.07:264,21,0	1/1:3,14:17:30.10:377,30,0	1/1:3,18:21:45.14:561,45,0	1/1:3,9:12:15.05:189,15,0	1/1:0,16:16:45.14:566,45,0	1/1:0,30:30:90.29:1132,90,0	1/1:1,35:35:87.28:1094,87,0	1/1:1,8:9:24.08:302,24,0
chr10	25555763	.	C	CA	18011.95	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-0.676;DP=555;FS=1.780;HRun=1;HaplotypeScore=76.9766;InbreedingCoeff=0.9940;MQ=72.14;MQ0=0;MQRankSum=-2.788;QD=41.03;ReadPosRankSum=4.737;VQSLOD=5.2547;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:60.19:0,60,778	1/1:0,7:7:21.07:315,21,0	0/0:8,0:8:19.09:0,19,205	0/0:13,0:13:39.13:0,39,500	1/1:0,18:18:51.13:739,51,0	1/1:1,23:24:57.19:854,57,0	1/1:0,14:14:36.12:540,36,0	0/0:31,0:31:90.28:0,90,1145	1/1:0,26:26:63.21:944,63,0	1/1:0,30:30:90.30:1349,90,0	1/1:0,24:24:66.18:964,66,0	1/1:0,16:16:42.14:630,42,0	1/1:0,19:19:57.19:854,57,0	1/1:0,22:22:63.21:944,63,0	0/0:20,0:20:60.18:0,60,764	1/1:0,23:23:66.22:990,66,0	0/0:22,0:22:57.18:0,57,738	1/1:1,20:21:57.15:829,57,0	1/1:0,21:21:63.20:911,63,0	1/1:0,17:17:48.16:719,48,0	1/1:0,21:21:60.20:899,60,0	1/1:0,9:9:24.08:360,24,0	1/1:0,23:23:63.21:944,63,0	1/1:0,18:18:51.17:764,51,0	1/1:1,10:11:27.09:405,27,0	1/1:1,26:26:72.24:1077,72,0	1/1:1,42:43:99:1754,117,0	1/1:0,5:5:15.05:225,15,0
chr10	25556014	.	T	TA	11131.06	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-5.466;DP=471;FS=10.422;HRun=8;HaplotypeScore=42.7396;InbreedingCoeff=0.8507;MQ=65.41;MQ0=3;MQRankSum=-3.365;QD=25.30;ReadPosRankSum=3.145;VQSLOD=4.9425;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,15:16:45.13:519,45,0	1/1:1,9:10:24.07:277,24,0	0/0:13,0:10:19.55:0,20,168	0/0:10,0:8:21.01:0,21,190	1/1:2,18:20:48.14:554,48,0	1/1:5,15:21:50.98:565,51,0	1/1:3,8:11:21.06:242,21,0	1/1:10,0:30:59.80:311,60,0	1/1:2,11:13:24.07:277,24,0	1/1:6,26:32:78.19:876,78,0	1/1:1,27:28:56.75:893,57,0	1/1:3,17:20:51.13:577,51,0	1/1:3,10:13:27.08:312,27,0	1/1:3,8:11:24.07:277,24,0	0/0:8,0:8:23.97:0,24,206	1/1:5,11:16:2.63:284,3,0	1/1:1,0:19:45.45:231,45,0	1/1:4,14:18:42.07:470,42,0	1/1:4,18:23:56.99:625,57,0	1/1:1,18:19:54.16:623,54,0	1/1:2,13:15:39.12:450,39,0	1/1:0,9:9:24.07:277,24,0	1/1:1,14:15:39.59:451,40,0	1/1:1,11:12:30.09:346,30,0	1/1:3,12:15:0.36:250,0,0	1/1:6,22:28:63.19:727,63,0	1/1:4,14:18:45.12:509,45,0	1/1:1,6:7:18.05:208,18,0
chr10	25556719	.	GTGAA	G	1161.92	PASS	AB=0.955;AC=14;AF=0.259;AN=54;BaseQRankSum=5.327;DP=651;FS=4.105;HRun=0;HaplotypeScore=131.5394;InbreedingCoeff=0.5273;MQ=78.17;MQ0=3;MQRankSum=-0.315;QD=5.33;ReadPosRankSum=-0.642;VQSLOD=2.5575;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:26:18.02:168,18,0	0/0:7,0:7:9.03:0,9,187	1/1:29,4:30:3.01:47,3,0	./.	0/0:38,0:38:75.17:0,75,1656	0/0:33,0:33:60.21:0,60,1380	0/0:16,0:16:21.07:0,21,486	1/1:19,0:25:7.35:36,7,0	0/0:26,1:27:1.35:0,1,1004	0/0:19,0:19:36.12:0,36,808	0/0:23,0:20:51.13:0,51,1118	0/1:17,1:18:13.70:14,0,667	0/0:28,0:28:45.15:0,45,1034	0/1:25,1:26:42.47:42,0,922	1/1:10,15:26:36.12:543,36,0	0/0:14,0:14:30.10:0,30,701	1/1:9,10:19:30.10:458,30,0	0/1:17,1:18:16.72:17,0,597	0/0:21,0:21:18.06:0,18,422	0/0:32,0:32:62.89:0,63,1358	0/1:24,1:25:7.68:8,0,811	0/0:26,0:25:30.06:0,30,657	0/0:14,0:14:21.07:0,21,464	0/0:16,0:16:33.11:0,33,779	0/0:19,0:19:36.11:0,36,789	0/0:26,0:26:42.14:0,42,991	0/0:41,0:41:90.30:0,90,2076	0/0:8,0:8:24.08:0,24,566
chr10	25557022	.	C	CTCTCTG	12509.95	PASS	AB=1.000;AC=49;AF=0.875;AN=56;BaseQRankSum=1.840;DP=595;FS=4.245;HRun=0;HaplotypeScore=166.2247;InbreedingCoeff=0.6466;MQ=48.92;MQ0=41;MQRankSum=2.528;QD=23.25;ReadPosRankSum=3.282;VQSLOD=4.1656;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:11:5.15:0,5,80	1/1:8,0:8:15.04:246,15,0	1/1:9,0:2:0.47:1,0,0	0/0:23,0:8:5.17:0,5,34	1/1:30,0:27:30.04:563,30,0	1/1:19,0:18:27.26:421,27,0	1/1:18,0:15:6.25:75,6,0	1/1:38,0:37:9.56:381,10,0	1/1:21,0:19:23.95:437,24,0	1/1:29,0:23:59.71:979,60,0	1/1:28,0:25:24.02:382,24,0	1/1:20,0:20:37.53:472,38,0	1/1:19,0:19:44.36:686,44,0	1/1:16,0:16:30.53:548,31,0	0/0:13,0:12:24.34:0,24,418	1/1:23,0:22:39.55:747,40,0	1/1:3,14:16:3.48:105,3,0	1/1:19,0:17:38.89:608,39,0	1/1:26,0:26:27.31:627,27,0	1/1:29,0:28:47.46:639,47,0	0/1:10,0:10:38.91:51,0,39	1/1:26,0:23:32.01:603,32,0	1/1:25,0:21:35.83:729,36,0	1/1:17,0:15:17.92:320,18,0	1/1:26,0:25:38.10:664,38,0	1/1:26,0:23:54.12:898,54,0	1/1:25,0:22:38.18:778,38,0	1/1:14,0:11:31.31:550,31,0
chr10	25557026	.	C	CTG	9652.38	PASS	AB=0.794;AC=46;AF=0.852;AN=54;BaseQRankSum=0.650;DP=584;FS=12.428;HRun=0;HaplotypeScore=154.8032;InbreedingCoeff=0.5238;MQ=45.80;MQ0=42;MQRankSum=3.533;QD=18.25;ReadPosRankSum=4.080;VQSLOD=4.2596;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:11:5.20:0,5,56	1/1:4,4:8:15.04:236,15,0	./.	0/0:17,0:6:4.25:0,4,31	1/1:24,5:26:30.04:406,30,0	1/1:15,3:17:27.32:344,27,0	1/1:18,2:17:5.84:75,6,0	0/1:33,0:32:99:335,0,101	1/1:17,4:19:23.95:289,24,0	1/1:23,5:22:55.43:787,55,0	1/1:23,5:25:24.02:301,24,0	1/1:16,4:20:39.72:447,40,0	1/1:15,5:20:43.99:496,44,0	1/1:12,4:16:33.51:453,34,0	0/0:14,0:12:29.93:0,30,354	1/1:14,9:22:38.49:521,38,0	1/1:17,0:16:3.48:34,3,0	1/1:11,7:16:33.23:484,33,0	1/1:25,1:25:4.19:459,4,0	1/1:27,4:30:50.86:530,51,0	0/1:3,7:10:38.90:46,0,39	1/1:24,3:23:32.72:426,33,0	1/1:21,5:22:35.82:488,36,0	1/1:12,5:15:17.73:259,18,0	1/1:19,7:25:39.06:516,39,0	1/1:23,4:23:46.56:684,47,0	1/1:23,3:23:44.36:605,44,0	1/1:8,6:11:25.47:434,25,0
chr10	25557047	.	TCTCTCACA	T	2758.62	PASS	AB=0.961;AC=21;AF=0.404;AN=52;BaseQRankSum=-2.251;DP=563;FS=44.435;HRun=0;HaplotypeScore=246.0716;InbreedingCoeff=-0.3994;MQ=39.78;MQ0=43;MQRankSum=-9.125;QD=6.86;ReadPosRankSum=-0.705;VQSLOD=1.1367;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:12:1.02:3,1,0	0/1:10,0:10:19.89:20,0,146	./.	./.	0/0:28,2:27:22.87:0,23,303	0/1:13,1:14:99:123,0,189	0/0:20,1:18:3.22:0,3,47	0/1:22,0:20:4.13:4,0,294	0/1:22,0:20:45.15:45,0,237	0/1:31,3:28:99:604,0,443	0/1:34,1:30:44.84:45,0,132	0/1:17,0:16:99:106,0,197	0/1:18,3:21:99:434,0,197	0/1:16,0:16:7.04:7,0,260	0/0:16,0:14:29.92:0,30,746	0/1:23,0:22:87.16:87,0,390	0/0:13,0:12:15.91:0,16,199	0/1:15,0:13:99:103,0,287	0/1:22,0:20:99:270,0,188	0/0:24,5:28:23.80:0,24,299	1/1:11,0:10:6.02:74,6,0	0/0:24,3:23:26.97:0,27,333	0/1:24,4:26:2.23:2,0,345	0/1:19,0:16:44.89:45,0,125	0/0:23,2:25:18.98:0,19,332	0/1:27,4:26:99:636,0,278	0/1:27,2:26:99:281,0,370	0/1:13,0:9:17.53:18,0,298
chr10	25557068	.	CACACACAGAGAG	C	5114.24	PASS	AB=0.994;AC=18;AF=0.346;AN=52;BaseQRankSum=-2.804;DP=582;FS=41.933;HRun=0;HaplotypeScore=242.5456;InbreedingCoeff=-0.0790;MQ=42.24;MQ0=47;MQRankSum=-5.649;QD=17.05;ReadPosRankSum=6.074;VQSLOD=2.6393;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:21,0:16:0.23:1,0,0	0/1:13,0:13:54.23:80,0,54	./.	./.	0/0:35,1:34:14.21:0,14,95	0/1:13,0:12:31.41:171,0,31	1/1:18,0:15:5.80:123,6,0	0/0:31,0:28:73.02:0,73,1484	0/1:19,0:17:13.25:149,0,13	0/1:34,0:31:55.01:1157,0,55	0/0:29,2:26:6.93:0,7,31	0/1:14,0:13:82.47:188,0,82	0/1:19,0:19:44.40:617,0,44	0/1:16,0:16:15.10:15,0,115	0/0:17,0:15:33.11:0,33,1166	0/1:19,0:18:59.60:64,0,60	0/0:16,0:15:34.65:0,35,1181	0/1:15,0:13:99:137,0,142	0/1:23,0:21:17.78:562,0,18	0/0:33,0:32:12.14:0,12,78	0/0:11,0:9:5.94:0,6,43	0/0:26,1:23:6.69:0,7,42	0/0:28,0:26:8.41:0,8,64	0/0:16,0:13:7.38:0,7,43	0/0:28,0:28:15.74:0,16,105	1/1:29,2:26:42.25:1276,42,0	1/1:30,0:26:1.63:534,2,0	0/1:13,0:9:40.83:41,0,92
chr10	25557070	.	CACACAGAGAG	C	6431.52	PASS	AB=0.759;AC=38;AF=0.731;AN=52;BaseQRankSum=4.433;DP=580;FS=0.000;HRun=0;HaplotypeScore=224.3423;InbreedingCoeff=0.4097;MQ=42.44;MQ0=47;MQRankSum=-0.255;QD=12.69;ReadPosRankSum=5.259;VQSLOD=3.3243;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:21,0:17:0.12:1,0,0	1/1:5,9:15:5.58:85,6,0	./.	./.	0/1:14,22:34:1.96:2,0,2	1/1:9,4:12:8.32:224,8,0	1/1:16,1:15:5.77:123,6,0	0/0:30,0:27:66.13:0,66,1129	1/1:6,13:17:7.27:197,7,0	1/1:15,19:31:42.64:1403,43,0	1/1:16,13:25:3.44:12,3,0	1/1:6,8:13:13.50:271,13,0	1/1:11,8:19:31.82:775,32,0	0/1:7,6:13:15.71:55,0,16	0/0:17,0:15:33.11:0,33,884	1/1:11,8:18:7:118,7,0	0/0:16,0:15:34.63:0,35,1040	0/1:10,5:13:18.35:193,0,18	1/1:10,13:21:38.93:811,39,0	0/1:15,18:33:0.44:0,0,3	1/1:11,0:9:1.37:5,1,0	0/1:15,0:23:0.58:1,0,1	0/1:15,12:26:0.59:2,0,1	1/1:14,2:13:3.73:14,4,0	1/1:12,16:28:6.44:19,6,0	1/1:15,13:25:68.62:1457,69,0	1/1:11,17:26:26.57:597,27,0	0/1:13,0:9:0.97:68,0,1
chr10	25557072	.	CACAGAGAG	C	5212.33	PASS	AB=0.984;AC=40;AF=0.769;AN=52;BaseQRankSum=6.971;DP=576;FS=4.719;HRun=0;HaplotypeScore=217.0414;InbreedingCoeff=0.5224;MQ=42.67;MQ0=46;MQRankSum=0.042;QD=10.90;ReadPosRankSum=3.381;VQSLOD=3.6302;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:18:2.58:0,3,58	1/1:15,0:15:4.84:65,5,0	./.	./.	0/1:35,1:34:1.63:2,0,2	1/1:11,1:12:9.30:172,9,0	1/1:17,0:15:5.80:123,6,0	0/0:31,0:28:68.49:0,68,1016	1/1:19,0:17:6.91:158,7,0	1/1:35,0:31:68.06:1148,68,0	1/1:28,1:24:1.77:5,2,0	1/1:14,0:13:10.40:205,10,0	1/1:20,0:19:30.76:603,31,0	1/1:13,0:13:0.89:54,1,0	0/0:17,0:15:32.62:0,33,639	1/1:19,0:18:8.88:93,9,0	0/0:17,0:16:37.58:0,38,994	1/1:15,0:13:3.07:152,3,0	1/1:21,1:20:42.75:673,43,0	0/1:33,0:32:0.16:0,0,3	1/1:10,0:8:2.13:6,2,0	0/1:24,1:21:0.09:0,0,2	0/1:28,0:26:0.27:2,0,0	1/1:16,0:13:2.99:7,3,0	1/1:26,1:27:2.77:9,3,0	1/1:29,0:25:66.45:1210,66,0	1/1:28,1:25:17.43:475,17,0	1/1:14,0:10:2.15:50,2,0
chr10	25557074	.	CAGAGAG	C	3962.19	PASS	AB=0.983;AC=34;AF=0.654;AN=52;BaseQRankSum=6.516;DP=570;FS=11.610;HRun=0;HaplotypeScore=198.4632;InbreedingCoeff=0.5456;MQ=42.54;MQ0=44;MQRankSum=-1.732;QD=10.80;ReadPosRankSum=3.614;VQSLOD=1.9463;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:18:2.42:0,2,58	1/1:15,0:15:2.59:42,3,0	0/0:7,0:1:3.01:0,3,69	./.	0/0:34,0:33:1.82:0,2,5	1/1:10,0:10:6.02:120,6,0	1/1:15,0:15:5.57:123,6,0	0/0:33,0:31:51.12:0,51,1014	1/1:19,0:17:6.02:119,6,0	1/1:35,0:31:48.04:874,48,0	0/1:28,0:24:0:0,0,0	1/1:14,0:13:8.73:165,9,0	1/1:20,0:19:17.36:427,17,0	1/1:13,0:13:3.01:53,3,0	0/0:17,0:15:18.06:0,18,444	1/1:19,0:18:3.01:60,3,0	0/0:17,0:16:34.65:0,35,869	1/1:15,0:13:5.61:116,6,0	1/1:21,0:20:33:503,33,0	0/1:33,0:32:0:0,0,0	1/1:10,0:8:2.98:22,3,0	1/1:25,0:21:0.47:1,0,0	0/0:26,0:24:0:0,0,0	0/0:12,1:12:0:0,0,0	./.	1/1:30,0:25:51.17:926,51,0	1/1:28,0:24:21.49:367,21,0	1/1:9,5:10:3.01:46,3,0
chr10	25561854	.	TACACAC	T	6887.42	PASS	AB=0.622;AC=42;AF=0.750;AN=56;BaseQRankSum=5.758;DP=732;FS=3.989;HRun=0;HaplotypeScore=271.4188;InbreedingCoeff=0.6608;MQ=38.93;MQ0=20;MQRankSum=-1.660;QD=14.97;ReadPosRankSum=4.541;VQSLOD=3.8945;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:10,0:19:0.19:0,0,0	1/1:4,5:11:18.06:306,18,0	0/0:96,0:34:67.94:0,68,1432	0/0:101,0:27:63.65:0,64,1512	1/1:8,12:30:9.94:118,10,0	1/1:4,9:15:2.22:24,2,0	1/1:15,11:39:30.99:523,31,0	0/0:16,0:19:39.13:0,39,597	1/1:5,12:26:23.61:409,24,0	1/1:12,8:25:57.18:948,57,0	1/1:5,5:17:6.02:116,6,0	1/1:2,13:18:9.01:171,9,0	1/1:5,9:22:24.08:470,24,0	1/1:4,11:19:21.07:420,21,0	0/0:15,0:15:39.13:0,39,1232	1/1:6,4:16:12.04:237,12,0	0/0:8,0:19:48.16:0,48,672	0/1:3,4:13:12.34:391,0,12	1/1:10,6:16:27.09:496,27,0	1/1:14,18:40:15.52:305,16,0	0/0:8,6:18:0.28:0,0,0	1/1:10,9:29:7.84:116,8,0	1/1:8,8:23:2.58:49,3,0	1/1:7,8:16:3.01:57,3,0	1/1:1,13:17:2.99:67,3,0	1/1:6,11:23:62.69:1058,63,0	1/1:5,9:17:24.08:418,24,0	1/1:0,4:7:12.04:192,12,0
chr10	25561882	.	TAC	T	2851.47	PASS	AB=0.750;AC=36;AF=0.643;AN=56;BaseQRankSum=8.754;DP=710;FS=14.293;HRun=0;HaplotypeScore=248.4732;InbreedingCoeff=0.3936;MQ=36.16;MQ0=21;MQRankSum=-1.846;QD=6.27;ReadPosRankSum=5.261;VQSLOD=1.3559;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:23.80:0,24,398	1/1:6,5:11:9.45:183,9,0	0/0:87,2:30:39.44:0,39,713	0/0:76,5:28:40.60:0,41,787	0/1:15,10:25:0:1,0,0	1/1:11,11:21:5.79:41,6,0	1/1:26,9:35:7.82:119,8,0	0/0:24,0:24:49.74:0,50,368	1/1:16,10:26:3.10:241,3,0	0/1:9,12:22:99:416,0,100	0/0:8,8:16:2.82:0,3,32	1/1:12,6:17:19.08:135,19,0	1/1:12,9:21:29.35:181,29,0	1/1:13,15:28:17.94:147,18,0	0/0:13,0:13:30.57:0,31,553	1/1:13,4:17:12.35:118,12,0	0/1:18,2:20:6.59:7,0,284	0/1:13,2:15:63.85:64,0,84	0/1:15,3:15:54.31:152,0,54	1/1:9,22:31:3.01:39,3,0	1/1:13,6:19:0.62:3,1,0	1/1:12,8:20:11.05:99,11,0	0/1:13,8:20:0.09:0,0,1	0/1:5,7:12:0:0,0,0	1/1:3,16:19:6:92,6,0	1/1:7,15:22:21.50:605,22,0	1/1:16,10:25:9.56:323,10,0	0/1:3,4:7:14.17:61,0,14
chr10	25561884	.	CGTGT	C	4437.98	PASS	AB=0.925;AC=40;AF=0.714;AN=56;BaseQRankSum=5.664;DP=701;FS=4.564;HRun=0;HaplotypeScore=251.4963;InbreedingCoeff=0.6576;MQ=36.58;MQ0=19;MQRankSum=-3.919;QD=9.91;ReadPosRankSum=3.548;VQSLOD=3.8776;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:32:26.80:0,27,653	1/1:11,0:11:17.98:283,18,0	0/0:88,0:30:28.46:0,28,398	0/0:78,0:28:17.89:0,18,510	0/1:22,2:24:0.25:0,0,0	1/1:13,8:21:5.55:100,6,0	1/1:22,14:36:8.52:134,9,0	0/0:4,0:23:44.30:0,44,210	1/1:20,6:26:21.05:330,21,0	1/1:21,1:22:36.12:558,36,0	1/1:15,1:16:2.89:50,3,0	0/1:19,0:18:12.14:107,0,12	1/1:20,1:21:3.24:174,3,0	1/1:19,9:28:21.02:236,21,0	0/0:11,0:13:29.82:0,30,627	1/1:9,7:16:12.04:195,12,0	0/0:11,0:19:24.94:0,25,121	1/1:7,7:14:12.04:199,12,0	1/1:12,5:14:21.07:344,21,0	1/1:31,0:31:2.97:50,3,0	1/1:14,5:19:3.01:51,3,0	1/1:20,0:20:12.04:200,12,0	0/1:15,6:21:0.10:0,0,0	0/1:12,0:12:0:0,0,0	1/1:19,0:19:5.99:94,6,0	1/1:21,1:22:47.71:755,48,0	1/1:13,13:26:30.09:441,30,0	1/1:7,0:7:9.03:136,9,0
chr10	25561888	.	T	TAC	1477.08	PASS	AB=0.935;AC=30;AF=0.536;AN=56;BaseQRankSum=8.529;DP=680;FS=11.508;HRun=0;HaplotypeScore=240.1508;InbreedingCoeff=0.0477;MQ=38.22;MQ0=18;MQRankSum=-1.443;QD=3.36;ReadPosRankSum=6.687;VQSLOD=0.5831;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:36.06:0,36,529	0/1:11,0:11:20.90:80,0,21	0/0:77,0:27:73.75:0,74,986	0/0:71,0:26:63.22:0,63,1028	0/1:24,0:24:0.26:0,0,1	1/1:21,0:20:5.77:42,6,0	1/1:34,0:34:11.21:83,11,0	0/0:25,0:25:67.65:0,68,590	0/1:23,0:23:14.78:72,0,15	0/1:25,0:25:99:197,0,308	0/1:16,0:16:10.49:41,0,10	1/1:13,6:18:2.78:159,3,0	0/1:14,8:22:6.73:157,0,7	1/1:14,13:27:18.84:102,19,0	0/0:12,0:12:30.08:0,30,460	1/1:14,0:14:10.22:55,10,0	0/0:17,0:17:37.47:0,37,348	0/1:13,0:13:20.94:21,0,58	0/1:17,0:14:49.30:49,0,132	1/1:31,0:31:2.53:12,3,0	1/1:19,0:19:1.55:4,2,0	0/1:18,0:18:21.27:21,0,32	0/1:13,8:20:0.13:0,0,0	0/1:5,7:12:0:0,0,0	1/1:18,0:18:5.99:58,6,0	0/1:22,0:22:99:278,0,155	0/1:26,0:25:21.59:159,0,22	0/1:7,0:7:51.02:51,0,63
chr10	25562314	.	C	CGT	1036.79	PASS	AB=0.903;AC=30;AF=0.652;AN=46;BaseQRankSum=-2.511;DP=511;FS=4.099;HRun=0;HaplotypeScore=87.0830;InbreedingCoeff=0.1987;MQ=67.34;MQ0=4;MQRankSum=0.122;QD=3.25;ReadPosRankSum=-0.649;VQSLOD=1.6642;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:25:2.84:0,3,14	0/1:7,0:7:0:0,0,0	./.	./.	1/1:13,5:21:6.02:88,6,0	1/1:8,4:12:3.01:44,3,0	1/1:18,5:22:6.02:88,6,0	./.	./.	1/1:29,0:29:2.82:42,3,0	1/1:13,0:13:3.01:44,3,0	1/1:7,1:8:3.01:44,3,0	0/1:16,0:17:2.07:99,0,2	0/1:14,0:15:8.10:19,0,8	0/0:6,0:6:3.01:0,3,32	1/1:4,2:6:3.01:44,3,0	0/0:20,0:27:11.03:0,11,55	0/1:15,3:20:60.44:74,0,60	./.	0/0:20,0:24:11.53:0,12,73	1/1:40,0:38:11.77:149,12,0	0/1:20,4:24:34.90:35,0,49	0/1:13,5:19:25.75:38,0,26	1/1:13,11:26:9.03:132,9,0	0/0:17,0:20:5.68:0,6,28	1/1:19,0:19:9.02:109,9,0	1/1:4,2:6:3.01:44,3,0	1/1:14,0:13:8.99:84,9,0
chr10	25564826	.	AGT	A	823.80	PASS	AC=30;AF=0.833;AN=36;BaseQRankSum=1.804;DP=334;FS=18.207;HRun=0;HaplotypeScore=46.0828;InbreedingCoeff=0.4398;MQ=63.72;MQ0=2;MQRankSum=-5.199;QD=4.50;ReadPosRankSum=-3.173;VQSLOD=-0.6197;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:24,0:22:63.08:0,63,1081	0/0:33,0:30:79.67:0,80,1447	1/1:12,2:14:3.01:46,3,0	./.	1/1:14,0:14:3.01:46,3,0	1/1:7,4:11:12:140,12,0	./.	1/1:16,0:16:6:52,6,0	1/1:10,1:11:3.01:46,3,0	1/1:14,1:15:6.01:71,6,0	./.	./.	0/0:19,0:19:57.20:0,57,1091	1/1:10,1:11:3.01:46,3,0	./.	./.	1/1:9,0:9:6.02:89,6,0	1/1:15,4:19:3.01:46,3,0	1/1:6,2:8:3.01:46,3,0	1/1:12,2:14:3.01:46,3,0	1/1:7,4:11:6.02:92,6,0	./.	1/1:9,2:11:6.02:92,6,0	1/1:7,0:7:3.01:45,3,0	1/1:11,1:12:3.01:46,3,0	./.
chr10	25585125	.	A	ACAC	17807.99	PASS	AB=0.526;AC=49;AF=0.875;AN=56;BaseQRankSum=-2.960;DP=442;FS=3.543;HRun=0;HaplotypeScore=75.2942;InbreedingCoeff=0.7346;MQ=61.62;MQ0=15;MQRankSum=-1.822;QD=45.20;ReadPosRankSum=3.018;VQSLOD=6.6037;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,0:19:29.29:124,29,0	1/1:0,6:6:9.03:206,9,0	0/0:17,0:10:23.28:0,23,296	0/0:17,0:13:26.01:0,26,306	1/1:8,14:23:66.18:1241,66,0	1/1:0,13:14:18.06:413,18,0	1/1:0,7:8:15.05:342,15,0	1/1:1,22:27:78.14:1281,78,0	1/1:0,18:18:39.13:887,39,0	1/1:1,21:25:72.20:1425,72,0	1/1:1,19:21:47.37:1037,47,0	0/1:1,8:10:12.73:392,0,13	1/1:0,11:11:27.09:620,27,0	1/1:6,9:17:45.14:885,45,0	0/0:14,0:14:42.14:0,42,755	1/1:0,8:9:20.28:419,20,0	1/1:1,8:11:26.83:598,27,0	1/1:2,10:13:33.09:680,33,0	1/1:0,25:27:79.46:1511,79,0	1/1:6,10:16:45.12:879,45,0	1/1:0,6:7:6.02:136,6,0	1/1:0,16:17:35.07:821,35,0	1/1:5,6:13:33.08:618,33,0	1/1:0,5:5:9.03:207,9,0	1/1:1,22:22:45.15:1033,45,0	1/1:0,19:19:53.39:1091,53,0	1/1:0,18:19:39.03:894,39,0	1/1:1,1:2:3.01:69,3,0
chr10	25585250	.	T	TTTG	22402.50	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-7.762;DP=612;FS=8.113;HRun=0;HaplotypeScore=96.9474;InbreedingCoeff=0.9845;MQ=90.06;MQ0=0;MQRankSum=-10.020;QD=42.27;ReadPosRankSum=4.045;VQSLOD=6.1075;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,19:25:50.41:936,50,0	1/1:5,5:10:15.05:313,15,0	0/0:36,0:36:67.13:0,67,998	0/0:31,0:31:66.16:0,66,929	1/1:7,30:38:75.95:1309,76,0	1/1:7,12:19:30.10:625,30,0	1/1:4,12:17:33.11:687,33,0	1/1:9,19:30:66.21:1283,66,0	1/1:4,15:19:51.18:1036,51,0	1/1:7,16:23:60.20:1196,60,0	1/1:4,22:26:62.96:1057,63,0	1/1:5,8:13:18.06:373,18,0	1/1:3,13:16:36.12:742,36,0	1/1:1,13:16:39.13:799,39,0	0/0:15,0:15:36.09:0,36,512	1/1:3,12:16:36.12:735,36,0	1/1:4,15:19:39.13:804,39,0	1/1:4,10:14:27.09:561,27,0	1/1:18,13:31:54.18:1052,54,0	1/1:5,28:33:80.98:1390,81,0	1/1:6,24:32:63.17:1262,63,0	1/1:7,16:23:57.20:1147,57,0	1/1:4,21:25:62.54:963,63,0	1/1:5,23:27:57.13:1179,57,0	1/1:0,8:8:24.08:499,24,0	1/1:5,18:23:57.18:1150,57,0	1/1:3,18:21:48.16:992,48,0	1/1:0,5:5:15.05:313,15,0
chr10	25585556	.	A	AG	1028.49	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-6.729;DP=568;FS=2.695;HRun=1;HaplotypeScore=56.2080;InbreedingCoeff=0.9409;MQ=59.32;MQ0=3;MQRankSum=-0.403;QD=27.07;ReadPosRankSum=1.470;VQSLOD=3.5832;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,36:38:75.25:1123,75,0	0/0:11,0:11:33.08:0,33,399	0/0:27,0:23:69.11:0,69,857	0/0:23,0:18:51.15:0,51,635	0/0:25,0:25:69.16:0,69,861	0/0:17,0:17:51.17:0,51,662	0/0:19,0:19:57.14:0,57,697	0/0:31,0:31:87.28:0,87,1117	0/0:22,0:22:60.18:0,60,764	0/0:29,0:29:81.26:0,81,1048	0/0:19,0:19:54.12:0,54,676	0/0:17,0:17:47.86:0,48,622	0/0:18,0:18:54.18:0,54,701	0/0:11,0:11:33.11:0,33,428	0/0:16,0:16:45.15:0,45,584	0/0:13,0:13:39.13:0,39,506	0/0:19,0:19:54.14:0,54,669	0/0:7,0:7:21.06:0,21,262	0/0:16,0:15:42.13:0,42,533	0/0:23,0:23:54.10:0,54,643	0/0:36,0:36:99:0,105,1347	0/0:22,0:22:63.11:0,63,764	0/0:29,0:29:69.22:0,69,895	0/0:12,0:12:36.12:0,36,467	0/0:15,0:15:36.07:0,36,447	0/0:29,0:29:87.28:0,87,1130	0/0:21,0:21:60.18:0,60,765	0/0:3,0:3:9.03:0,9,116
chr10	25587146	.	AG	A	5573.64	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=3.122;DP=281;FS=2.005;HRun=7;HaplotypeScore=43.1143;InbreedingCoeff=0.8765;MQ=77.82;MQ0=1;MQRankSum=-2.116;QD=25.80;ReadPosRankSum=3.328;VQSLOD=5.2470;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:42.11:0,42,503	1/1:0,1:1:3.01:31,3,0	0/0:16,0:15:29.98:0,30,342	0/0:11,0:10:18.04:0,18,207	1/1:4,13:17:42.09:428,42,0	1/1:1,11:12:33.04:325,33,0	1/1:1,7:8:18.04:184,18,0	0/0:13,0:13:27.07:0,27,323	1/1:0,5:5:15.03:153,15,0	1/1:2,7:9:27.06:271,27,0	1/1:1,10:11:27.05:268,27,0	1/1:3,6:9:24.05:240,24,0	1/1:1,3:4:9.02:92,9,0	1/1:0,15:14:42.09:427,42,0	0/0:4,0:4:12.04:0,12,151	1/1:3,5:8:24.03:232,24,0	0/0:7,0:7:18.06:0,18,222	1/1:4,2:6:5.27:79,5,0	1/1:3,12:15:39.07:391,39,0	1/1:2,9:11:18.03:179,18,0	1/1:2,16:18:45.09:453,45,0	1/1:0,8:8:15.03:153,15,0	1/1:3,13:16:39.06:384,39,0	1/1:1,5:6:15.03:153,15,0	1/1:1,9:10:30.07:305,30,0	1/1:1,13:14:42.10:428,42,0	1/1:0,12:12:36.08:367,36,0	1/1:0,1:1:3.01:31,3,0
chr10	25587153	.	GA	G	860.48	PASS	AB=0.975;AC=32;AF=0.571;AN=56;BaseQRankSum=1.337;DP=282;FS=3.945;HRun=2;HaplotypeScore=61.0193;InbreedingCoeff=0.2368;MQ=76.11;MQ0=0;MQRankSum=-1.335;QD=3.95;ReadPosRankSum=8.587;VQSLOD=0.2007;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:45.01:0,45,561	0/0:3,0:3:1.59:0,2,43	0/0:13,0:13:32.62:0,33,365	0/0:8,1:8:15.03:0,15,163	0/1:18,0:18:19.60:36,0,20	1/1:11,0:11:7.24:85,7,0	1/1:7,0:7:10.98:32,11,0	0/0:11,0:11:33.06:0,33,422	1/1:5,0:5:10.30:31,10,0	1/1:9,0:9:15.43:63,15,0	0/1:13,0:13:29.90:30,0,48	0/1:7,2:9:2.22:128,0,2	0/1:4,0:4:15.28:15,0,15	1/1:15,0:14:27.21:94,27,0	0/0:4,0:4:12.04:0,12,173	1/1:8,0:8:9.21:29,9,0	0/0:7,0:7:21.02:0,21,276	0/1:4,0:4:6.39:6,0,17	0/1:13,1:14:3.83:59,0,4	0/1:13,0:13:31.42:31,0,83	1/1:18,0:18:22.54:65,23,0	0/1:10,0:10:17.73:18,0,69	0/1:16,0:16:34.50:62,0,34	0/1:6,0:6:4.26:16,0,4	1/1:9,1:10:20.52:89,21,0	1/1:14,0:14:26.38:97,26,0	1/1:13,0:13:1.52:47,2,0	1/1:1,0:1:2.37:8,2,0
chr10	25587211	.	TAA	T	8776.28	PASS	AB=0.929;AC=45;AF=0.804;AN=56;BaseQRankSum=-0.917;DP=339;FS=0.000;HRun=9;HaplotypeScore=67.1948;InbreedingCoeff=0.8541;MQ=74.21;MQ0=1;MQRankSum=-2.181;QD=31.12;ReadPosRankSum=2.267;VQSLOD=5.0008;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:2,0:13:27.45:0,27,97	1/1:0,10:10:30.09:350,30,0	0/0:14,0:12:14.91:0,15,175	0/1:12,1:9:14.59:15,0,56	1/1:1,24:25:75.22:874,75,0	1/1:1,17:18:51.14:584,51,0	1/1:2,4:6:12.03:140,12,0	0/0:2,0:9:18.12:0,18,71	1/1:0,7:7:21.06:245,21,0	1/1:0,17:17:51.15:594,51,0	1/1:1,21:22:66.19:764,66,0	1/1:0,11:11:33.10:385,33,0	1/1:1,4:5:15.04:175,15,0	1/1:2,8:9:24.07:280,24,0	0/0:9,0:9:27.09:0,27,443	1/1:1,8:9:27.08:315,27,0	0/0:0,0:11:24.95:0,25,88	1/1:1,5:6:15.04:175,15,0	1/1:3,10:13:30.08:350,30,0	1/1:3,17:20:54.15:621,54,0	1/1:1,4:5:15.04:174,15,0	1/1:1,10:11:30.07:339,30,0	1/1:2,22:24:72.18:808,72,0	1/1:0,3:3:9.03:105,9,0	1/1:2,11:13:33.09:384,33,0	1/1:2,12:14:39.07:439,39,0	1/1:0,13:13:39.12:454,39,0	1/1:1,6:7:18.05:210,18,0
chr10	25587275	.	G	GA	8814.91	PASS	AB=0.693;AC=45;AF=0.804;AN=56;BaseQRankSum=-2.679;DP=409;FS=13.873;HRun=9;HaplotypeScore=69.1916;InbreedingCoeff=0.6138;MQ=64.29;MQ0=0;MQRankSum=-1.348;QD=24.55;ReadPosRankSum=0.957;VQSLOD=4.5346;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:59.48:0,59,503	1/1:1,7:8:24.06:260,24,0	0/0:16,1:15:34.12:0,34,286	0/0:5,0:5:8.03:0,8,58	0/1:8,9:17:10.03:332,0,10	1/1:4,13:17:39.10:424,39,0	1/1:1,9:11:29.85:297,30,0	1/1:3,15:18:45.11:489,45,0	1/1:2,9:11:27.03:285,27,0	1/1:7,23:30:72.17:773,72,0	1/1:2,16:18:51.10:550,51,0	1/1:1,5:6:15.04:166,15,0	1/1:1,5:6:15:145,15,0	1/1:3,12:15:41.93:438,42,0	0/0:5,0:5:15:0,15,130	1/1:1,8:9:24.06:265,24,0	0/1:7,8:15:5.04:165,0,5	1/1:3,12:15:13.06:372,13,0	1/1:10,12:22:22.05:462,22,0	1/1:3,20:23:51.14:564,51,0	1/1:0,10:10:30.08:332,30,0	1/1:4,10:14:24.06:261,24,0	1/1:4,18:22:25.08:505,25,0	1/1:2,7:9:1:231,1,0	1/1:4,12:16:39.11:431,39,0	1/1:3,21:24:63.15:681,63,0	0/1:12,5:17:22.05:219,0,22	1/1:0,5:5:15.04:166,15,0
chr10	25587602	.	CA	C	13710.64	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=5.368;DP=568;FS=10.543;HRun=6;HaplotypeScore=60.0749;InbreedingCoeff=0.9981;MQ=63.64;MQ0=2;MQRankSum=-2.051;QD=26.57;ReadPosRankSum=5.310;VQSLOD=4.4994;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,25:28:63.15:675,63,0	1/1:1,10:11:26.91:290,27,0	0/0:21,0:19:31.26:0,31,597	0/0:12,0:10:30.05:0,30,351	1/1:2,27:29:75.19:806,75,0	1/1:4,23:27:66.16:709,66,0	1/1:1,12:13:30.08:322,30,0	1/1:6,19:24:57.12:597,57,0	1/1:2,24:26:69.17:741,69,0	1/1:4,27:31:81.06:845,81,0	1/1:1,17:18:45.11:483,45,0	1/1:1,15:16:42.11:451,42,0	1/1:1,16:17:38.75:418,39,0	1/1:0,13:13:36.09:387,36,0	0/0:19,0:19:57.19:0,57,749	1/1:1,16:17:39.10:419,39,0	1/1:3,28:31:66.16:709,66,0	1/1:1,17:18:45.11:483,45,0	1/1:2,16:18:48.12:516,48,0	1/1:2,29:31:75.18:803,75,0	1/1:1,13:14:33.08:355,33,0	1/1:1,17:18:39.09:418,39,0	1/1:3,24:27:66.16:707,66,0	1/1:0,19:19:54.14:580,54,0	1/1:0,14:14:39.10:419,39,0	1/1:2,19:21:57.14:611,57,0	1/1:1,25:26:66.17:708,66,0	1/1:0,8:8:24.06:258,24,0
chr10	25588272	.	CAA	C	10571.67	PASS	AB=0.956;AC=52;AF=0.929;AN=56;BaseQRankSum=2.167;DP=527;FS=1.533;HRun=11;HaplotypeScore=136.7521;InbreedingCoeff=0.4680;MQ=64.61;MQ0=2;MQRankSum=-0.029;QD=20.57;ReadPosRankSum=4.784;VQSLOD=3.3513;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,37:41:62.66:1008,63,0	1/1:1,8:9:24.06:255,24,0	0/1:28,1:18:5.91:6,0,234	0/1:27,0:20:22.57:23,0,256	1/1:5,14:19:36.08:383,36,0	1/1:4,17:21:54.10:565,54,0	1/1:2,10:12:24.05:254,24,0	1/1:8,11:18:33.04:344,33,0	1/1:5,16:21:42.10:446,42,0	1/1:7,18:25:48.07:507,48,0	1/1:4,14:18:39.08:413,39,0	1/1:3,15:18:39.08:415,39,0	1/1:4,13:17:36.06:383,36,0	1/1:3,15:18:42.08:447,42,0	0/0:12,0:13:36.12:0,36,535	1/1:1,18:19:47.94:498,48,0	1/1:1,10:11:24.06:255,24,0	1/1:1,3:4:8.38:95,8,0	1/1:4,6:8:11.51:114,12,0	1/1:2,22:24:57.10:601,57,0	1/1:4,12:16:30.06:319,30,0	1/1:4,18:22:51.11:543,51,0	1/1:3,19:21:42.10:447,42,0	1/1:1,18:19:51.12:543,51,0	1/1:2,5:7:3.76:145,4,0	1/1:7,18:25:54.08:573,54,0	1/1:5,24:29:69.15:734,69,0	1/1:0,8:8:24.06:255,24,0
chr10	25588579	.	AGAG	A	693.09	PASS	AB=0.980;AC=18;AF=0.321;AN=56;BaseQRankSum=2.742;DP=364;FS=8.844;HRun=0;HaplotypeScore=157.9545;InbreedingCoeff=-0.4960;MQ=32.65;MQ0=9;MQRankSum=-0.481;QD=2.73;ReadPosRankSum=-4.828;VQSLOD=0.2520;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:9,12:21:99:276,0,297	0/1:3,0:3:3.02:3,0,26	0/0:11,0:3:9.03:0,9,182	0/0:15,0:3:5.37:0,5,34	0/1:24,0:19:19.05:19,0,205	0/1:15,0:15:21.86:22,0,89	0/0:4,0:3:8.61:0,9,97	0/0:18,0:15:41.81:0,42,588	0/1:16,0:16:27.36:27,0,227	0/1:18,0:17:14.03:14,0,258	0/1:19,0:18:26.80:27,0,232	0/1:8,0:6:49.16:59,0,49	0/1:7,0:5:11.16:11,0,71	0/0:7,0:7:7.08:0,7,59	0/1:7,0:7:6.83:7,0,153	0/1:7,0:6:23.10:32,0,23	0/1:9,0:8:20.62:21,0,133	0/1:4,0:3:25.53:42,0,26	0/0:14,0:12:27.51:0,28,336	0/1:27,0:25:99:128,0,278	0/0:1,0:1:3.01:0,3,33	0/1:15,0:14:2.02:2,0,186	0/0:21,0:20:12.37:0,12,193	0/0:3,0:2:2.37:0,2,8	0/0:16,0:14:0.33:0,0,93	0/1:26,0:23:99:107,0,196	0/1:22,0:18:16.11:16,0,268	0/1:6,0:6:25.42:25,0,86
chr10	25588582	.	GGGAAGGAA	G	6614.07	PASS	AB=0.869;AC=31;AF=0.554;AN=56;BaseQRankSum=0.925;DP=351;FS=14.920;HRun=0;HaplotypeScore=161.6062;InbreedingCoeff=-0.2957;MQ=32.16;MQ0=10;MQRankSum=-0.303;QD=22.27;ReadPosRankSum=-2.759;VQSLOD=3.0589;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:20.38:0,20,335	1/1:2,1:3:6.02:113,6,0	0/0:11,0:3:9.03:0,9,147	0/0:15,0:3:5.93:0,6,49	0/1:16,7:18:49.52:533,0,50	0/1:11,2:13:62.91:214,0,63	0/1:4,0:3:30.88:71,0,31	1/1:19,0:15:21.80:308,22,0	0/1:15,1:16:28.09:262,0,28	0/1:15,2:16:34.14:408,0,34	0/1:16,3:18:12.04:395,0,12	0/1:7,1:6:3.43:170,0,3	0/1:6,0:4:9.81:46,0,10	0/1:5,2:7:23.60:154,0,24	0/0:7,0:7:12.04:0,12,195	0/1:6,1:6:24.75:92,0,25	0/1:8,0:7:39.12:60,0,39	1/1:4,0:3:6.01:76,6,0	1/1:11,2:11:27.09:483,27,0	0/1:23,4:25:63.67:618,0,64	1/1:1,0:1:3.01:36,3,0	0/1:11,2:12:32.15:217,0,32	0/1:13,6:18:26.51:484,0,27	1/1:2,0:2:3.01:37,3,0	0/1:7,9:14:12.69:645,0,13	0/1:24,2:23:99:413,0,106	0/1:17,4:17:54.85:534,0,55	1/1:4,1:5:15.05:247,15,0
chr10	25588610	.	AG	A	62.96	PASS	AB=0.842;AC=4;AF=0.071;AN=56;BaseQRankSum=-2.318;DP=414;FS=5.480;HRun=1;HaplotypeScore=167.6426;InbreedingCoeff=0.0704;MQ=32.88;MQ0=15;MQRankSum=-2.892;QD=1.70;ReadPosRankSum=3.596;VQSLOD=-0.5441;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:17:35.98:0,36,399	0/0:9,0:8:14.22:0,14,115	0/0:10,0:3:8.98:0,9,107	0/0:14,0:3:8.82:0,9,58	0/0:25,0:21:20.63:0,21,312	0/0:20,0:17:30.25:0,30,284	0/0:13,0:8:4.57:0,5,103	0/1:13,4:12:99:134,0,266	0/0:18,0:16:1.51:0,2,104	0/0:22,0:20:38.45:0,38,408	0/0:25,0:24:18.93:0,19,264	0/0:9,0:7:14:0,14,182	0/0:6,0:4:5.75:0,6,32	0/0:5,0:5:4.81:0,5,60	0/0:8,0:8:16.65:0,17,148	0/0:8,0:7:11.81:0,12,125	0/1:12,2:13:12.37:12,0,264	0/0:6,0:4:6.73:0,7,73	0/0:14,0:13:20.53:0,21,225	0/0:31,0:29:50.56:0,51,431	0/0:2,0:2:0.72:0,1,18	0/0:12,0:11:19.03:0,19,169	0/0:21,0:20:29.84:0,30,260	1/1:6,0:5:0.87:2,1,0	0/0:19,0:18:39.22:0,39,249	0/0:28,0:24:51.71:0,52,491	0/0:24,0:20:25.73:0,26,280	0/0:10,0:10:24.39:0,24,228
chr10	25588614	.	AG	A	2274.50	PASS	AB=0.865;AC=24;AF=0.429;AN=56;BaseQRankSum=-1.025;DP=428;FS=5.854;HRun=1;HaplotypeScore=160.7827;InbreedingCoeff=-0.5433;MQ=33.84;MQ0=16;MQRankSum=-2.412;QD=6.35;ReadPosRankSum=5.951;VQSLOD=0.7857;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:17:31.05:0,31,379	0/1:9,1:9:22.08:22,0,96	0/0:8,0:2:6.02:0,6,87	0/0:11,0:2:0.47:0,0,1	0/1:20,6:22:99:232,0,224	0/1:20,1:18:82.28:82,0,143	0/1:13,2:9:68.30:68,0,95	0/1:19,0:13:38.17:38,0,165	0/1:13,6:17:73.82:251,0,74	0/1:19,2:19:99:166,0,228	0/1:21,7:28:99:203,0,229	0/1:8,1:8:36.84:37,0,160	1/1:4,2:5:4.99:58,5,0	0/1:5,0:5:42.33:42,0,54	0/0:10,0:10:16.69:0,17,136	0/0:8,1:8:11.22:0,11,100	0/0:13,0:12:7.39:0,7,231	0/1:6,1:5:31.73:32,0,63	0/1:9,5:13:99:218,0,126	0/1:27,5:31:99:251,0,246	0/1:1,1:2:16.89:36,0,17	0/1:10,1:10:62.60:90,0,63	0/1:18,5:22:99:162,0,160	1/1:4,2:5:2.99:39,3,0	0/1:20,1:20:34.58:35,0,134	0/1:21,7:24:99:147,0,262	0/1:21,5:21:99:198,0,184	0/1:8,1:9:25.03:25,0,119
chr10	25588622	.	AG	A	2505.97	PASS	AB=0.804;AC=22;AF=0.407;AN=54;BaseQRankSum=8.977;DP=435;FS=6.886;HRun=1;HaplotypeScore=159.6213;InbreedingCoeff=-0.7189;MQ=36.44;MQ0=21;MQRankSum=-6.041;QD=6.65;ReadPosRankSum=4.944;VQSLOD=0.7669;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:15:11.41:0,11,352	0/1:10,0:10:31.93:32,0,87	0/0:8,0:2:5.83:0,6,38	./.	0/1:15,3:24:99:203,0,216	0/1:16,4:19:99:187,0,111	0/1:17,0:10:11.58:12,0,126	0/1:11,6:8:71.18:187,0,71	0/1:16,3:18:99:129,0,159	0/1:17,5:22:99:171,0,241	0/1:23,3:29:99:153,0,148	0/1:7,1:8:42.39:42,0,133	0/1:4,1:5:24.94:71,0,25	0/1:1,2:5:26.73:74,0,27	0/0:10,0:10:19.73:0,20,200	0/1:8,1:10:12.60:13,0,96	0/0:16,0:15:23.52:0,24,315	0/1:7,0:5:18.79:19,0,87	0/1:13,2:13:90.77:100,0,91	0/1:24,7:35:99:289,0,345	0/0:2,0:2:1.09:0,1,28	0/1:6,4:12:85.39:173,0,85	0/1:13,4:22:99:179,0,184	0/1:8,0:7:32.30:32,0,72	0/1:9,2:20:71.36:221,0,71	0/1:22,3:25:99:163,0,227	0/1:16,5:21:99:172,0,144	0/1:8,0:9:33.75:34,0,94
chr10	25588630	.	AG	A	6239.42	PASS	AB=0.729;AC=24;AF=0.462;AN=52;BaseQRankSum=-2.957;DP=455;FS=0.420;HRun=1;HaplotypeScore=148.4671;InbreedingCoeff=-0.5768;MQ=38.93;MQ0=31;MQRankSum=3.765;QD=16.91;ReadPosRankSum=6.398;VQSLOD=5.0770;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:17:1.13:0,1,168	0/1:4,8:11:16.35:283,0,16	./.	./.	0/1:21,7:27:99:386,0,276	0/1:9,13:19:19.95:435,0,20	0/1:15,4:11:63.94:64,0,106	0/0:24,0:11:29.52:0,30,296	0/1:15,8:21:99:166,0,222	0/1:10,15:23:99:568,0,103	0/1:17,12:29:99:445,0,170	0/1:5,3:8:92.73:93,0,131	0/1:4,1:5:32.93:33,0,53	0/1:5,0:5:30.09:77,0,30	0/0:11,0:11:5.31:0,5,199	1/1:2,5:7:15.05:207,15,0	0/0:17,0:16:33.10:0,33,468	0/1:5,3:6:72.78:91,0,73	0/1:15,2:12:74.41:74,0,264	0/1:14,18:32:99:762,0,121	1/1:1,2:3:3.01:42,3,0	0/1:5,7:12:4.97:276,0,5	0/1:15,8:22:78.07:481,0,78	0/1:5,3:7:12.46:113,0,12	0/1:13,7:20:5.05:528,0,5	0/1:11,15:25:99:553,0,197	0/1:17,8:21:99:352,0,159	0/1:4,8:12:37.77:209,0,38
chr10	25589583	.	G	GA	13323.02	PASS	AB=0.600;AC=47;AF=0.839;AN=56;BaseQRankSum=-4.118;DP=625;FS=3.934;HRun=9;HaplotypeScore=81.1263;InbreedingCoeff=0.8139;MQ=59.96;MQ0=0;MQRankSum=-2.486;QD=24.90;ReadPosRankSum=2.449;VQSLOD=5.5596;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:27:68.01:0,68,579	1/1:2,12:14:30.08:330,30,0	0/0:25,0:23:35.74:0,36,383	0/0:17,0:17:37.89:0,38,328	1/1:4,28:32:61.10:876,61,0	1/1:5,24:29:72.19:795,72,0	1/1:1,14:15:33.08:360,33,0	1/1:6,20:26:54.12:585,54,0	1/1:5,20:25:11.06:578,11,0	1/1:4,20:24:57.15:630,57,0	1/1:3,20:23:60.16:663,60,0	1/1:1,26:27:69.19:763,69,0	1/1:1,12:13:36.09:394,36,0	1/1:3,16:19:26.90:477,27,0	0/0:20,0:20:53.94:0,54,462	1/1:0,16:15:42.11:465,42,0	1/1:4,22:26:41.68:582,42,0	1/1:3,17:20:28.08:525,28,0	1/1:8,14:22:22.04:451,22,0	1/1:6,17:23:28.05:524,28,0	1/1:2,21:23:60.16:664,60,0	1/1:2,14:17:44.95:479,45,0	1/1:6,23:29:37.10:638,37,0	1/1:1,13:14:33.56:364,34,0	1/1:6,9:15:1.74:240,2,0	1/1:5,21:27:68.66:725,69,0	1/1:12,29:41:64.14:921,64,0	0/1:5,10:15:16.01:296,0,16
chr10	25590241	.	AC	A	1786.54	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=1.504;DP=539;FS=1.858;HRun=1;HaplotypeScore=64.3030;InbreedingCoeff=0.9757;MQ=57.88;MQ0=0;MQRankSum=-0.637;QD=34.36;ReadPosRankSum=-3.497;VQSLOD=2.5059;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:54.18:0,54,828	0/0:12,0:12:36.12:0,36,562	0/0:16,0:15:42.14:0,42,621	0/0:22,0:20:47.05:0,47,720	0/0:23,0:23:63.08:0,63,912	0/0:27,0:27:78.20:0,78,1191	0/0:14,0:14:39.12:0,39,587	1/1:0,34:34:99:1389,102,0	0/0:29,0:29:87.28:0,87,1336	0/0:31,0:31:93.27:0,93,1399	0/0:23,0:23:69.23:0,69,1064	0/0:15,0:15:45.15:0,45,704	0/0:17,0:17:51.14:0,51,749	0/0:17,0:17:51.17:0,51,798	0/0:16,0:16:48.15:0,48,728	0/0:11,0:11:33.11:0,33,515	1/1:1,17:18:10.25:513,10,0	0/0:16,0:16:48.16:0,48,748	0/0:14,0:14:42.13:0,42,636	0/0:19,0:19:57.17:0,57,866	0/0:10,0:10:30.10:0,30,469	0/0:18,0:18:54.01:0,54,806	0/0:16,0:16:48.15:0,48,726	0/0:12,0:12:36.12:0,36,560	0/0:19,0:19:57.19:0,57,888	0/0:26,0:26:78.24:0,78,1194	0/0:25,0:24:75.19:0,75,1095	0/0:16,0:16:48.16:0,48,747
chr10	25590616	.	TA	T	7163.70	PASS	AB=0.950;AC=43;AF=0.768;AN=56;BaseQRankSum=12.143;DP=496;FS=13.187;HRun=10;HaplotypeScore=109.0607;InbreedingCoeff=0.8836;MQ=58.15;MQ0=0;MQRankSum=1.481;QD=18.85;ReadPosRankSum=5.065;VQSLOD=4.0865;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:48.13:0,48,531	0/0:9,0:9:27.05:0,27,282	0/0:15,0:12:27.06:0,27,286	0/1:18,1:15:14.87:15,0,163	1/1:5,16:21:47.97:417,48,0	1/1:1,16:17:38.98:339,39,0	1/1:0,11:11:24:208,24,0	0/0:35,0:35:81.16:0,81,862	1/1:0,17:17:44.89:381,45,0	1/1:6,19:25:56.96:489,57,0	1/1:5,22:27:26.78:461,27,0	1/1:2,3:5:8.99:78,9,0	1/1:3,9:12:20.99:182,21,0	1/1:0,5:5:15:130,15,0	0/0:12,0:12:29.86:0,30,323	1/1:0,8:8:23.92:200,24,0	0/0:24,0:23:58.71:0,59,620	1/1:5,14:19:20.72:294,21,0	1/1:0,12:11:32.99:287,33,0	1/1:0,22:22:53.62:432,54,0	1/1:1,27:28:65.88:572,66,0	1/1:4,7:11:17.98:156,18,0	1/1:2,20:22:47.88:407,48,0	1/1:0,8:8:18:156,18,0	1/1:2,14:17:37.94:310,38,0	1/1:1,26:27:77.97:673,78,0	1/1:2,29:31:74.98:651,75,0	1/1:2,14:16:29.55:325,30,0
chr10	25593095	.	AGTGT	A	15509.02	PASS	AB=0.586;AC=45;AF=0.804;AN=56;BaseQRankSum=-2.147;DP=655;FS=8.605;HRun=0;HaplotypeScore=135.1355;InbreedingCoeff=0.8705;MQ=71.02;MQ0=4;MQRankSum=-1.642;QD=30.83;ReadPosRankSum=7.670;VQSLOD=3.8813;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:6,32:38:57.19:949,57,0	1/1:0,12:12:33.11:557,33,0	0/0:50,0:37:46.88:0,47,1251	0/0:33,0:25:24.44:0,24,1108	1/1:9,19:28:42.14:709,42,0	1/1:4,15:19:36.12:607,36,0	1/1:4,19:23:45.15:746,45,0	0/0:16,1:35:8.91:0,9,309	1/1:2,23:25:54.18:911,54,0	1/1:3,16:19:39.10:584,39,0	1/1:1,13:15:30.10:484,30,0	1/1:3,16:19:42.14:683,42,0	1/1:3,15:18:36.12:607,36,0	1/1:3,16:19:39.13:658,39,0	0/0:21,0:22:53.92:0,54,1254	1/1:5,10:15:27.09:455,27,0	0/0:2,0:11:21.89:0,22,98	0/1:5,12:17:29.10:235,0,29	1/1:13,16:29:45.11:676,45,0	1/1:8,21:29:54.66:912,55,0	1/1:2,20:22:42.14:709,42,0	1/1:5,20:25:42.14:709,42,0	1/1:9,18:27:48.06:810,48,0	1/1:2,19:21:39.60:659,40,0	1/1:1,13:15:33.11:534,33,0	1/1:6,18:24:54.14:849,54,0	1/1:5,26:31:66.23:1113,66,0	1/1:3,10:13:21.07:354,21,0
chr10	25594537	.	ACG	A	7458.58	PASS	AB=1.000;AC=53;AF=0.946;AN=56;BaseQRankSum=-4.279;DP=484;FS=1.756;HRun=0;HaplotypeScore=96.1124;InbreedingCoeff=0.5960;MQ=76.10;MQ0=6;MQRankSum=0.284;QD=16.01;ReadPosRankSum=1.349;VQSLOD=4.9413;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,30:33:15.05:191,15,0	1/1:6,1:6:18.04:210,18,0	0/1:12,0:11:3.40:3,0,31	0/0:18,0:14:6.89:0,7,70	1/1:18,1:19:38.26:315,38,0	1/1:19,3:21:37.76:342,38,0	1/1:14,3:17:29.79:243,30,0	1/1:7,11:18:30.09:379,30,0	1/1:15,4:19:33.83:298,34,0	1/1:25,1:26:57.44:494,57,0	1/1:13,2:15:26.80:204,27,0	1/1:14,3:17:35.88:336,36,0	1/1:4,2:6:5.80:81,6,0	1/1:8,5:13:32.78:282,33,0	1/1:4,9:13:6.02:76,6,0	1/1:6,2:8:20.48:176,20,0	1/1:6,21:27:35.97:417,36,0	1/1:13,1:14:16.78:263,17,0	1/1:14,0:13:24.02:265,24,0	1/1:18,6:24:45.97:491,46,0	1/1:22,0:22:36.83:306,37,0	1/1:12,3:15:34.92:248,35,0	1/1:11,6:17:39.83:313,40,0	1/1:25,0:25:32.97:287,33,0	1/1:11,1:12:17.62:166,18,0	1/1:29,1:30:71.79:686,72,0	1/1:11,0:11:17.99:172,18,0	1/1:7,2:9:23.99:212,24,0
chr10	25594555	.	GCA	G	2365.82	PASS	AB=0.849;AC=43;AF=0.860;AN=50;BaseQRankSum=2.357;DP=476;FS=9.808;HRun=0;HaplotypeScore=121.1597;InbreedingCoeff=-0.1998;MQ=56.14;MQ0=11;MQRankSum=-1.463;QD=5.32;ReadPosRankSum=-0.321;VQSLOD=1.9445;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:46,1:45:50.57:51,0,222	1/1:5,4:8:9.01:86,9,0	./.	./.	1/1:12,4:15:11.99:119,12,0	1/1:14,7:22:1.32:90,1,0	0/1:13,5:18:23.05:105,0,23	./.	1/1:12,6:19:9.10:246,9,0	0/1:24,3:26:30.74:119,0,31	1/1:11,3:15:8.69:72,9,0	1/1:8,7:17:12.63:89,13,0	1/1:1,2:3:5.99:51,6,0	1/1:11,4:17:17.29:128,17,0	0/1:8,1:9:10.61:11,0,61	1/1:6,2:8:7.28:53,7,0	1/1:15,0:19:8.58:44,9,0	1/1:9,2:11:4.43:55,4,0	1/1:9,4:12:11.99:118,12,0	0/1:12,10:22:4.96:124,0,5	0/1:26,2:27:5.94:114,0,6	1/1:16,5:22:22.16:145,22,0	1/1:15,6:21:6.18:185,6,0	1/1:20,4:24:12.01:120,12,0	1/1:5,1:10:3.31:16,3,0	0/1:17,8:25:19.14:213,0,19	1/1:4,10:14:6.49:66,6,0	1/1:6,2:8:9.43:72,9,0
chr10	25595122	.	T	TTAA	273.56	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=7.008;DP=421;FS=4.430;HRun=0;HaplotypeScore=76.7691;InbreedingCoeff=-0.3597;MQ=81.26;MQ0=4;MQRankSum=0.216;QD=1.15;ReadPosRankSum=-0.186;VQSLOD=1.2883;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:39.09:0,39,463	0/1:7,0:7:31.98:32,0,54	0/0:35,0:19:10.32:0,10,160	0/1:23,0:14:0.07:0,0,132	0/0:14,4:18:26.96:0,27,222	0/1:16,0:16:38.78:56,0,39	0/1:13,0:13:9.13:9,0,102	0/0:19,0:19:41.92:0,42,384	0/1:11,0:11:47.03:47,0,55	0/1:14,0:14:33.78:34,0,129	0/1:13,0:13:18.96:19,0,124	0/1:11,0:11:11.23:11,0,39	0/1:8,0:8:30.63:31,0,59	0/1:11,0:11:18.88:19,0,93	0/0:14,0:14:41.94:0,42,430	0/0:6,0:6:4.04:0,4,12	0/0:20,0:20:44.37:0,44,390	0/1:6,0:6:17.22:17,0,18	0/0:17,0:17:33.74:0,34,244	0/1:19,0:19:67.46:67,0,89	0/1:9,0:9:33.54:34,0,58	0/1:17,0:17:16.99:17,0,117	0/1:18,0:18:0.18:0,0,208	1/1:4,0:4:0.20:17,0,0	0/1:12,0:12:8.45:8,0,140	0/0:18,0:18:13.11:0,13,235	0/1:26,0:26:1.76:2,0,157	0/0:18,0:18:5.03:0,5,147
chr10	25596188	.	T	TTG	8989.62	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=2.969;DP=610;FS=5.286;HRun=0;HaplotypeScore=158.1892;InbreedingCoeff=0.9892;MQ=75.10;MQ0=0;MQRankSum=-3.970;QD=16.29;ReadPosRankSum=7.131;VQSLOD=4.2184;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,38:40:81.28:1626,81,0	1/1:10,0:10:20.46:149,20,0	0/0:21,0:21:26.26:0,26,603	0/0:20,0:21:49.30:0,49,549	1/1:27,0:27:62.04:352,62,0	1/1:13,0:13:25.66:135,26,0	1/1:15,0:15:37.84:248,38,0	1/1:18,0:18:48.66:321,49,0	1/1:26,0:26:64.67:352,65,0	1/1:28,0:28:72.30:470,72,0	1/1:17,0:17:40.32:252,40,0	1/1:25,0:25:61.66:406,62,0	1/1:16,0:16:34.87:215,35,0	1/1:22,0:22:51.70:296,52,0	0/0:16,0:16:48.13:0,48,726	1/1:19,0:19:48.97:306,49,0	1/1:34,0:34:63.49:466,63,0	1/1:24,0:24:63.38:368,63,0	1/1:30,0:30:66.67:479,67,0	1/1:23,0:23:46.80:314,47,0	1/1:34,0:34:71.65:449,72,0	1/1:19,0:19:34.33:197,34,0	1/1:17,0:16:29.24:183,29,0	1/1:38,0:38:93.09:563,93,0	1/1:16,0:16:28.17:199,28,0	1/1:22,0:22:58.94:392,59,0	1/1:14,0:14:23.65:180,24,0	1/1:5,0:5:14.23:72,14,0
chr10	25596195	.	GGC	G	16706.71	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-1.072;DP=573;FS=4.422;HRun=0;HaplotypeScore=118.8118;InbreedingCoeff=0.9928;MQ=72.90;MQ0=0;MQRankSum=-3.998;QD=33.96;ReadPosRankSum=2.801;VQSLOD=6.7176;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:84.18:0,84,1010	1/1:2,7:9:18.05:244,18,0	0/0:17,0:17:43.93:0,44,580	0/0:17,0:17:39.02:0,39,557	1/1:0,26:26:72.06:945,72,0	1/1:0,14:14:27.09:390,27,0	1/1:0,15:15:39.07:523,39,0	1/1:1,21:22:63.03:718,63,0	1/1:2,26:28:72.24:1026,72,0	1/1:2,26:28:69.14:952,69,0	1/1:1,15:16:39.13:548,39,0	1/1:0,21:21:57.19:810,57,0	1/1:0,16:16:30.10:433,30,0	1/1:1,21:22:45.15:648,45,0	0/0:16,0:16:48.07:0,48,761	1/1:2,14:16:39.12:547,39,0	1/1:1,31:32:74.90:1032,75,0	1/1:0,21:21:63.20:891,63,0	1/1:1,26:27:76.11:1033,76,0	1/1:2,22:24:59.97:740,60,0	1/1:2,28:30:54.18:781,54,0	1/1:1,20:21:51.07:673,51,0	1/1:2,15:16:39.12:533,39,0	1/1:2,32:34:81.14:1172,81,0	1/1:0,15:15:42.13:564,42,0	1/1:0,20:20:60.15:824,60,0	1/1:0,13:13:33.10:462,33,0	1/1:0,5:5:15.05:217,15,0
chr10	25596196	.	GC	G	7748.54	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=7.389;DP=557;FS=4.530;HRun=1;HaplotypeScore=137.6544;InbreedingCoeff=0.9920;MQ=72.46;MQ0=0;MQRankSum=-5.376;QD=16.18;ReadPosRankSum=2.471;VQSLOD=5.2870;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:83.48:0,83,681	1/1:7,0:7:17.67:110,18,0	0/0:15,1:16:29.46:0,29,425	0/0:15,0:15:38.92:0,39,441	1/1:26,0:26:71.02:464,71,0	1/1:14,0:14:26.60:169,27,0	1/1:15,0:15:38.41:243,38,0	1/1:21,0:21:62.46:451,62,0	1/1:26,2:28:70.95:454,71,0	1/1:26,1:26:68:436,68,0	1/1:15,1:16:38.36:241,38,0	1/1:21,0:21:56.11:354,56,0	1/1:16,0:16:29.58:193,30,0	1/1:21,0:21:44.29:279,44,0	0/0:16,0:16:48.06:0,48,605	1/1:14,1:15:38.48:267,38,0	1/1:31,1:32:74.15:486,74,0	1/1:21,0:21:62.10:402,62,0	1/1:26,0:26:74.03:495,74,0	1/1:22,1:23:59.01:371,59,0	1/1:28,1:29:53.18:338,53,0	1/1:21,0:21:50.19:319,50,0	1/1:15,0:15:38.29:236,38,0	1/1:32,0:32:79.78:507,80,0	1/1:15,0:15:41.25:256,41,0	1/1:20,0:20:59.15:381,59,0	1/1:13,0:13:32.46:203,32,0	1/1:5,0:5:14.78:94,15,0
chr10	25597793	.	T	TG	5592.71	PASS	AB=1.000;AC=51;AF=0.911;AN=56;BaseQRankSum=-1.194;DP=301;FS=9.030;HRun=0;HaplotypeScore=44.7912;InbreedingCoeff=0.6206;MQ=53.93;MQ0=26;MQRankSum=2.636;QD=20.41;ReadPosRankSum=3.381;VQSLOD=5.8900;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,0:2:2.99:24,3,0	1/1:3,2:4:10.98:100,11,0	0/1:37,0:6:0.47:0,0,55	0/0:17,0:4:3.92:0,4,23	1/1:6,9:14:41.74:430,42,0	1/1:4,7:9:16.22:266,16,0	1/1:4,2:4:12.03:139,12,0	1/1:13,0:11:12.32:263,12,0	1/1:0,5:5:15.04:173,15,0	1/1:3,9:12:32.69:324,33,0	1/1:7,9:14:39.56:407,40,0	1/1:0,4:4:12.02:133,12,0	1/1:4,3:5:3.16:42,3,0	1/1:3,6:9:20.87:214,21,0	0/0:9,0:5:14.69:0,15,116	1/1:2,3:5:12.04:154,12,0	1/1:9,2:7:17.35:124,17,0	1/1:1,6:7:13.94:183,14,0	1/1:4,6:9:24.22:221,24,0	1/1:9,10:17:18.48:488,18,0	1/1:3,5:7:21.06:253,21,0	1/1:1,4:5:14.91:158,15,0	1/1:5,5:8:23.29:206,23,0	1/1:3,2:4:9.01:92,9,0	1/1:1,4:4:12.03:142,12,0	1/1:6,4:10:29.83:282,30,0	1/1:7,13:19:48.36:522,48,0	1/1:2,7:7:21.06:255,21,0
chr10	25597794	.	ATT	A	3551.85	PASS	AB=0.798;AC=43;AF=0.768;AN=56;BaseQRankSum=1.480;DP=299;FS=5.089;HRun=12;HaplotypeScore=55.4229;InbreedingCoeff=0.5150;MQ=51.97;MQ0=28;MQRankSum=1.465;QD=16.37;ReadPosRankSum=4.239;VQSLOD=2.3025;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:2:3.01:0,3,40	0/1:3,2:4:9.16:49,0,9	0/0:36,1:5:2.23:0,2,50	0/0:17,1:4:2.96:0,3,20	1/1:3,13:14:35.71:304,36,0	1/1:4,6:9:23.64:194,24,0	1/1:5,1:4:2.98:28,3,0	0/0:13,0:11:23.17:0,23,146	1/1:1,4:5:11.96:103,12,0	1/1:2,10:12:26.15:234,26,0	1/1:4,12:14:38.88:339,39,0	1/1:1,3:4:8.94:76,9,0	1/1:4,3:5:7.14:39,7,0	1/1:3,6:9:17.77:147,18,0	0/0:9,0:5:12.04:0,12,161	1/1:1,4:5:9:81,9,0	1/1:10,2:7:20.18:140,20,0	1/1:2,4:6:11.97:111,12,0	0/1:9,2:8:3.66:38,0,4	1/1:6,13:17:38.77:323,39,0	1/1:3,5:7:14.95:133,15,0	1/1:2,3:5:11.94:99,12,0	1/1:3,7:8:17.84:145,18,0	0/1:4,1:4:14.33:24,0,14	1/1:1,4:4:11.97:105,12,0	1/1:3,8:10:27:254,27,0	1/1:5,15:19:47.69:397,48,0	1/1:2,7:7:21.01:190,21,0
chr10	25601784	.	GGATA	G	260.17	PASS	AC=8;AF=1.00;AN=8;DP=1044;DS;FS=0.000;HRun=0;HaplotypeScore=11.0439;MQ=2.68;MQ0=1025;QD=5.42;VQSLOD=0.8380;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	./.	./.	./.	./.	./.	1/1:24,3:1:3.01:54,3,0	1/1:3,2:1:3.01:55,3,0	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	1/1:9,3:2:6.02:109,6,0	./.	./.	./.	./.	./.	1/1:2,2:2:6.02:109,6,0
chr10	25603783	.	AG	A	639.92	PASS	AB=1.000;AC=5;AF=0.192;AN=26;BaseQRankSum=2.767;DP=236;FS=20.194;HRun=2;HaplotypeScore=19.4590;InbreedingCoeff=0.2592;MQ=63.86;MQ0=19;MQRankSum=-4.075;QD=11.03;ReadPosRankSum=0.099;VQSLOD=-0.2187;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:2:2.94:0,3,18	0/0:4,0:2:6.02:0,6,90	0/1:18,0:11:5.93:6,0,260	0/0:20,0:10:21.04:0,21,292	./.	./.	0/0:10,0:3:3.01:0,3,45	1/1:11,24:21:57.15:721,57,0	./.	./.	./.	./.	1/1:5,0:2:0.47:1,0,0	./.	0/0:15,0:14:30.09:0,30,424	0/0:4,0:1:3.01:0,3,45	./.	0/0:3,0:2:3.01:0,3,45	0/0:23,0:1:3.01:0,3,45	0/0:6,0:4:6.02:0,6,90	./.	./.	./.	./.	0/0:4,0:3:2.98:0,3,22	./.	./.	./.
chr10	25604053	.	GC	G	5388.54	PASS	AB=0.529;AC=41;AF=0.788;AN=52;BaseQRankSum=5.879;DP=405;FS=22.785;HRun=5;HaplotypeScore=53.7912;InbreedingCoeff=0.7653;MQ=40.84;MQ0=59;MQRankSum=-2.094;QD=19.96;ReadPosRankSum=-0.506;VQSLOD=3.0189;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:28:24.08:0,24,328	1/1:0,5:5:15.04:170,15,0	0/0:11,1:1:3.01:0,3,37	0/0:15,0:2:6.02:0,6,82	1/1:1,13:13:30.09:340,30,0	1/1:0,14:14:33.09:374,33,0	./.	./.	1/1:1,14:14:27.08:306,27,0	1/1:0,14:14:36.10:408,36,0	1/1:0,15:15:33.09:374,33,0	1/1:1,10:9:15.04:170,15,0	1/1:0,15:13:21.06:237,21,0	1/1:1,13:10:12.03:136,12,0	0/0:17,0:17:35.82:0,36,492	0/1:1,8:7:22.87:152,0,23	0/0:19,0:16:24.08:0,24,328	1/1:0,11:10:21.06:238,21,0	1/1:5,7:5:12.03:137,12,0	1/1:2,11:13:33.09:374,33,0	1/1:1,16:15:12.03:136,12,0	1/1:1,6:7:12.03:136,12,0	1/1:1,15:16:36.10:408,36,0	1/1:2,13:10:12.03:136,12,0	1/1:2,13:14:24.07:272,24,0	1/1:0,12:11:30.08:340,30,0	1/1:1,18:17:39.11:442,39,0	1/1:0,7:5:9.03:102,9,0
chr10	25604471	.	TA	T	894.76	PASS	AB=0.929;AC=4;AF=0.071;AN=56;BaseQRankSum=6.087;DP=487;FS=0.635;HRun=9;HaplotypeScore=52.0552;InbreedingCoeff=0.5703;MQ=68.00;MQ0=1;MQRankSum=-0.949;QD=13.35;ReadPosRankSum=1.865;VQSLOD=3.1541;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,37:41:99:988,108,0	0/0:8,0:8:21.06:0,21,242	0/0:13,0:12:16.81:0,17,327	0/1:12,1:13:5.14:5,0,171	0/0:20,0:20:45.05:0,45,489	0/0:18,0:18:45.12:0,45,510	0/0:16,0:17:35.90:0,36,380	0/0:19,0:19:45.09:0,45,483	0/0:24,0:24:57.14:0,57,644	0/0:21,0:21:48.14:0,48,551	0/0:15,0:15:27.07:0,27,302	0/0:16,0:16:39.08:0,39,429	0/0:13,0:13:33.10:0,33,381	0/0:15,0:15:42.08:0,42,464	0/0:16,0:16:39.10:0,39,441	0/0:12,0:12:36.11:0,36,415	0/0:12,0:12:36.11:0,36,414	0/0:5,0:5:15.04:0,15,173	0/1:12,1:13:0.39:0,0,250	0/0:17,1:18:23.65:0,24,511	0/0:28,0:28:75.22:0,75,865	0/0:20,0:20:45.13:0,45,517	0/0:21,0:21:57.09:0,57,627	0/0:24,0:24:66.18:0,66,751	0/0:20,0:20:42.08:0,42,463	0/0:16,0:16:39.12:0,39,450	0/0:17,0:17:42.12:0,42,484	0/0:12,0:12:30.09:0,30,346
chr10	25604837	.	GA	G	1924.69	PASS	AC=44;AF=0.917;AN=48;BaseQRankSum=1.442;DP=235;FS=12.956;HRun=9;HaplotypeScore=29.2139;InbreedingCoeff=0.3094;MQ=30.74;MQ0=105;MQRankSum=-1.129;QD=11.26;ReadPosRankSum=1.666;VQSLOD=0.7675;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,6:5:9:82,9,0	1/1:2,3:3:6:55,6,0	./.	0/0:15,0:3:0.40:0,0,20	1/1:3,6:3:9:82,9,0	./.	1/1:4,1:3:2.99:27,3,0	1/1:2,3:3:9:82,9,0	1/1:3,7:9:21.01:192,21,0	./.	1/1:5,2:4:3:27,3,0	1/1:1,7:7:18.01:165,18,0	1/1:2,8:8:24.01:219,24,0	1/1:0,3:3:9:82,9,0	0/0:14,0:9:8.98:0,9,89	1/1:1,5:6:15.01:137,15,0	1/1:8,3:3:9:82,9,0	1/1:4,3:3:9:82,9,0	1/1:7,1:2:3:27,3,0	1/1:4,1:1:3:27,3,0	./.	1/1:2,3:2:6:55,6,0	1/1:2,4:4:9:82,9,0	1/1:13,2:2:3:27,3,0	1/1:0,2:2:6:55,6,0	1/1:5,5:5:12.01:110,12,0	1/1:6,11:11:33.02:302,33,0	1/1:0,2:1:3:27,3,0
chr10	25609647	.	A	AG	5446.22	PASS	AB=0.845;AC=23;AF=0.411;AN=56;BaseQRankSum=16.217;DP=930;DS;FS=22.478;HRun=0;HaplotypeScore=130.2153;InbreedingCoeff=-0.7032;MQ=33.85;MQ0=239;MQRankSum=-11.387;QD=6.96;ReadPosRankSum=5.588;VQSLOD=3.1531;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:40,16:38:99:635,0,700	0/1:10,2:11:60.59:61,0,143	0/0:9,0:4:11.91:0,12,141	0/0:12,0:8:12.01:0,12,145	0/1:36,7:34:99:193,0,380	0/1:34,5:27:99:152,0,424	0/1:27,5:16:99:189,0,160	0/0:90,0:14:45.12:0,45,578	0/1:26,15:33:99:603,0,277	0/1:30,9:31:99:331,0,263	0/1:23,2:17:48.44:48,0,232	0/0:16,0:9:26.79:0,27,197	0/1:16,6:15:99:237,0,137	0/1:32,7:25:99:257,0,285	0/1:24,9:22:99:356,0,402	0/0:21,0:14:41.80:0,42,318	0/1:24,6:23:99:167,0,624	0/1:14,2:11:63.98:64,0,127	0/1:34,6:11:64.90:248,0,65	0/1:24,10:31:99:380,0,287	0/1:37,5:35:99:115,0,283	0/1:30,7:30:99:246,0,311	0/1:30,6:27:99:211,0,285	0/1:30,3:25:28.10:28,0,331	0/1:16,2:14:57.41:57,0,177	0/1:43,10:32:99:376,0,318	0/1:36,12:41:99:440,0,496	0/1:12,2:14:52.13:52,0,180
chr10	25610066	.	TG	T	688.11	PASS	AC=2;AF=0.037;AN=54;BaseQRankSum=2.923;DP=565;FS=3.241;HRun=1;HaplotypeScore=38.2247;InbreedingCoeff=0.7139;MQ=32.81;MQ0=141;MQRankSum=1.145;QD=19.66;ReadPosRankSum=-0.924;VQSLOD=3.4734;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,32:27:57.18:782,57,0	0/0:11,0:8:18.06:0,18,287	0/0:23,0:1:3.01:0,3,48	./.	0/0:20,0:14:39.11:0,39,621	0/0:25,0:21:42.14:0,42,668	0/0:17,0:10:18.06:0,18,287	0/0:26,0:4:12.04:0,12,192	0/0:19,0:10:21.07:0,21,335	0/0:18,0:13:39.13:0,39,623	0/0:20,0:11:27.09:0,27,431	0/0:11,0:9:21.07:0,21,335	0/0:19,0:11:24.08:0,24,383	0/0:23,0:11:30.10:0,30,478	0/0:16,0:11:27.09:0,27,431	0/0:19,0:12:30.10:0,30,478	0/0:21,0:19:36.12:0,36,575	0/0:23,0:14:27.09:0,27,431	0/0:24,0:7:21.07:0,21,336	0/0:19,0:12:30.10:0,30,465	0/0:18,0:13:24.08:0,24,384	0/0:19,0:10:18.06:0,18,283	0/0:12,0:8:20.94:0,21,334	0/0:32,0:24:45.15:0,45,718	0/0:13,0:6:12.04:0,12,192	0/0:23,0:18:54.18:0,54,863	0/0:20,0:17:39.13:0,39,622	0/0:2,0:2:6.02:0,6,96
chr10	25610600	.	AAAAT	A	4414.05	PASS	AC=42;AF=0.913;AN=46;BaseQRankSum=2.881;DP=145;FS=18.481;HRun=0;HaplotypeScore=25.4104;InbreedingCoeff=0.4496;MQ=39.85;MQ0=9;MQRankSum=-1.968;QD=31.76;ReadPosRankSum=1.620;VQSLOD=2.8213;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,2:6:6.02:100,6,0	1/1:0,3:3:6.02:100,6,0	0/0:2,0:2:6.02:0,6,148	./.	1/1:2,6:6:18.06:299,18,0	1/1:2,4:6:12.04:199,12,0	./.	1/1:3,2:4:6.02:96,6,0	1/1:0,4:4:3.01:50,3,0	1/1:1,9:9:27.09:422,27,0	1/1:5,10:15:24.08:398,24,0	1/1:1,6:7:15.05:249,15,0	1/1:0,4:4:12.04:199,12,0	1/1:0,3:3:6.02:100,6,0	0/0:1,0:1:3.01:0,3,74	1/1:0,1:1:3.01:50,3,0	./.	1/1:5,4:9:9.03:149,9,0	1/1:2,6:7:18.05:276,18,0	1/1:1,7:7:15.05:249,15,0	1/1:0,5:5:9.03:136,9,0	./.	1/1:2,2:3:6.02:99,6,0	./.	1/1:1,6:7:15.05:249,15,0	1/1:0,9:9:27.09:448,27,0	1/1:1,4:5:12.04:199,12,0	1/1:3,6:9:21.07:349,21,0
chr10	25610641	.	TA	T	548.32	PASS	AB=0.897;AC=11;AF=0.196;AN=56;BaseQRankSum=-1.797;DP=280;FS=37.882;HRun=12;HaplotypeScore=46.0794;InbreedingCoeff=0.3822;MQ=47.43;MQ0=1;MQRankSum=1.649;QD=6.53;ReadPosRankSum=-0.884;VQSLOD=-0.6192;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,7:10:20.91:163,21,0	0/1:4,1:5:11.21:11,0,79	0/1:8,1:8:20.17:20,0,87	0/0:5,0:3:2.96:0,3,19	0/0:14,0:15:38.85:0,39,359	0/0:6,0:6:6.01:0,6,61	0/0:3,0:3:6.01:0,6,61	1/1:1,17:20:54.85:401,55,0	0/0:7,0:7:9.02:0,9,91	0/0:16,0:16:39.08:0,39,396	0/0:14,1:15:0.77:0,1,179	0/0:7,0:7:14.99:0,15,141	0/0:8,0:8:24.05:0,24,243	0/0:12,0:12:30.02:0,30,293	0/0:8,0:8:17.96:0,18,161	0/0:6,0:6:18:0,18,173	1/1:0,5:4:11.95:93,12,0	0/0:13,0:13:29.98:0,30,283	0/1:9,1:9:5.21:5,0,129	0/0:12,0:12:24.02:0,24,234	0/0:9,0:9:12.02:0,12,122	0/1:9,1:10:2.19:2,0,162	0/0:15,0:16:35.84:0,36,329	0/0:3,0:3:6.01:0,6,61	0/0:9,0:9:21.01:0,21,203	0/1:13,1:14:2.23:2,0,153	0/0:9,0:9:18.03:0,18,177	0/0:17,0:17:39.08:0,39,396
chr10	25611578	.	GA	G	310.99	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=4.326;DP=410;FS=13.225;HRun=8;HaplotypeScore=47.2473;InbreedingCoeff=0.7547;MQ=85.43;MQ0=1;MQRankSum=-0.778;QD=9.72;ReadPosRankSum=0.828;VQSLOD=0.5097;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,16:16:42.07:405,42,0	0/0:8,0:8:24.07:0,24,290	0/0:22,0:21:23.62:0,24,452	0/1:16,0:14:0.09:0,0,255	0/0:22,0:22:63.19:0,63,761	0/0:12,0:13:38.99:0,39,449	0/0:12,0:12:27.07:0,27,315	0/0:22,0:22:63.17:0,63,732	0/0:16,0:16:48.15:0,48,579	0/0:18,0:18:42.12:0,42,499	0/0:12,0:12:33.06:0,33,381	0/0:8,0:8:21.06:0,21,254	0/0:15,0:15:42.10:0,42,484	0/0:12,0:13:32.94:0,33,363	0/0:15,0:15:45.14:0,45,544	0/0:6,0:6:18.04:0,18,206	0/0:13,0:13:33.06:0,33,382	0/0:8,0:8:21.03:0,21,228	0/0:24,0:23:69.20:0,69,823	0/0:24,0:24:60.18:0,60,725	0/0:12,0:12:36.08:0,36,408	0/0:10,0:10:30.04:0,30,334	0/0:16,0:16:45.14:0,45,542	0/0:9,0:9:27.08:0,27,326	0/0:19,0:19:54.17:0,54,652	0/0:17,0:17:42.13:0,42,507	0/0:20,0:20:54.15:0,54,640	0/0:4,0:4:12.04:0,12,145
chr10	25611600	.	G	GA	257.79	PASS	AB=0.917;AC=3;AF=0.054;AN=56;BaseQRankSum=-3.336;DP=430;FS=2.226;HRun=10;HaplotypeScore=52.0453;InbreedingCoeff=0.6103;MQ=76.42;MQ0=1;MQRankSum=0.155;QD=9.55;ReadPosRankSum=-1.863;VQSLOD=1.7187;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:53.52:0,54,428	0/0:7,0:7:14.98:0,15,123	0/0:14,0:12:16.50:0,17,127	0/0:13,0:11:15.35:0,15,120	0/0:26,0:26:49.32:0,49,397	0/0:16,0:16:40.97:0,41,326	0/0:10,0:10:17.95:0,18,146	1/1:4,12:16:33.08:351,33,0	0/0:15,1:17:8.99:0,9,269	0/0:19,0:19:32.94:0,33,271	0/0:23,0:23:39.95:0,40,301	0/0:8,0:8:14.94:0,15,121	0/0:17,0:17:41.92:0,42,345	0/0:12,0:12:32.96:0,33,271	0/0:18,0:18:41.92:0,42,342	0/0:6,0:6:17.97:0,18,146	0/0:12,0:12:32.96:0,33,271	0/0:12,0:12:17.91:0,18,148	0/0:23,1:24:24.93:0,25,411	0/0:28,0:29:58.56:0,59,458	0/0:12,0:12:35.96:0,36,295	0/1:10,1:11:5.04:5,0,168	0/0:17,0:17:29.85:0,30,238	0/0:5,0:5:14.98:0,15,123	0/0:25,0:25:65.87:0,66,538	0/0:17,0:17:14.78:0,15,279	0/0:18,0:18:41.83:0,42,344	0/0:5,0:5:11.98:0,12,99
chr10	25611826	.	AGG	A	8779.37	PASS	AC=46;AF=0.852;AN=54;BaseQRankSum=-5.202;DP=450;FS=3.310;HRun=11;HaplotypeScore=68.6842;InbreedingCoeff=0.9793;MQ=79.16;MQ0=1;MQRankSum=-0.034;QD=22.57;ReadPosRankSum=5.486;VQSLOD=4.4823;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,0:28:63.12:275,63,0	1/1:3,7:10:18.04:191,18,0	0/0:18,0:18:39.10:0,39,497	0/0:15,0:18:20:0,20,354	1/1:1,14:15:36.07:383,36,0	1/1:3,12:15:36.09:383,36,0	1/1:4,15:19:39.09:415,39,0	1/1:3,33:37:99:1036,100,0	1/1:2,14:16:39.09:415,39,0	1/1:2,12:14:39.07:405,39,0	1/1:4,12:16:36.06:383,36,0	1/1:1,13:14:39.08:415,39,0	1/1:3,11:14:33.08:351,33,0	1/1:1,12:13:33.08:351,33,0	0/0:11,0:12:14.54:0,15,193	1/1:1,9:10:27.07:287,27,0	1/1:2,0:16:30.18:132,30,0	0/0:5,0:9:12.68:0,13,54	1/1:3,5:8:18.04:191,18,0	1/1:5,9:14:30.07:319,30,0	1/1:5,15:20:45.09:477,45,0	1/1:3,9:12:24.04:247,24,0	1/1:4,10:14:24.04:255,24,0	1/1:4,11:15:36.07:383,36,0	1/1:5,17:21:45.07:467,45,0	1/1:5,12:17:36.07:383,36,0	1/1:7,23:29:60.13:635,60,0	./.
chr10	25611836	.	GGA	G	1347.95	PASS	AB=0.968;AC=30;AF=0.536;AN=56;BaseQRankSum=2.375;DP=430;FS=0.000;HRun=0;HaplotypeScore=89.3083;InbreedingCoeff=0.0535;MQ=81.50;MQ0=2;MQRankSum=0.400;QD=4.23;ReadPosRankSum=9.114;VQSLOD=0.9833;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:48.78:0,49,340	0/1:9,0:9:29.48:41,0,29	0/0:23,0:21:56.42:0,56,631	0/0:17,0:17:37.88:0,38,527	1/1:15,0:15:3.84:48,4,0	1/1:13,0:13:1.50:56,2,0	0/1:18,0:18:44.86:59,0,45	0/1:39,0:39:71.93:91,0,72	1/1:15,0:15:2.92:75,3,0	0/1:15,1:16:46.43:46,0,58	0/1:14,0:14:20.04:50,0,20	1/1:13,0:13:28.24:109,28,0	1/1:12,0:12:9.73:112,10,0	0/1:15,0:15:47.63:88,0,48	0/0:7,0:7:17.89:0,18,261	0/1:13,0:13:45.94:46,0,74	0/0:19,0:19:45.85:0,46,235	0/0:6,0:6:8.03:0,8,66	0/1:6,1:7:12.61:37,0,13	0/1:13,1:14:64.72:103,0,65	1/1:15,1:16:30.20:119,30,0	0/1:9,1:10:18.47:54,0,18	1/1:10,0:10:17.10:56,17,0	1/1:12,1:13:4.81:103,5,0	0/1:19,1:19:29:36,0,29	0/1:13,0:13:3.92:33,0,4	1/1:24,0:23:24.01:166,24,0	0/0:6,0:5:14.97:0,15,120
chr10	25612079	.	CA	C	163.90	PASS	AB=0.909;AC=4;AF=0.071;AN=56;BaseQRankSum=5.145;DP=415;FS=4.932;HRun=10;HaplotypeScore=41.3121;InbreedingCoeff=0.3728;MQ=68.10;MQ0=0;MQRankSum=0.003;QD=5.46;ReadPosRankSum=-0.440;VQSLOD=0.2412;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,11:14:26.99:234,27,0	0/1:7,0:7:5.51:6,0,118	0/1:7,2:8:33.18:33,0,104	0/0:2,0:3:4.53:0,5,25	0/0:24,1:25:43.14:0,43,704	0/0:17,0:17:45.11:0,45,490	0/0:3,0:3:9.02:0,9,100	0/0:22,0:22:60.13:0,60,641	0/0:14,0:14:42.11:0,42,463	0/0:23,0:23:51.13:0,51,552	0/0:31,2:33:26.09:0,26,734	0/0:9,0:9:23.53:0,24,225	0/0:12,0:12:33.07:0,33,355	0/0:15,0:15:36.02:0,36,365	0/0:7,0:7:18.05:0,18,199	0/0:14,0:14:39.11:0,39,431	0/0:17,0:17:42.11:0,42,462	0/0:17,1:18:12.99:0,13,338	0/0:18,0:18:39.09:0,39,423	0/0:42,0:42:99:0,117,1268	0/0:4,0:4:9.02:0,9,100	0/0:16,0:16:33.09:0,33,361	0/0:16,0:15:42.11:0,42,465	0/0:6,0:6:15.04:0,15,166	0/0:12,0:12:30.08:0,30,332	0/0:25,0:25:60.16:0,60,664	0/0:13,0:13:27.73:0,28,328	0/0:1,0:1:3.01:0,3,33
chr10	25612689	.	C	CTCTCTT	6588.83	PASS	AB=1.000;AC=45;AF=0.804;AN=56;BaseQRankSum=5.321;DP=716;FS=2.880;HRun=0;HaplotypeScore=170.0097;InbreedingCoeff=0.8139;MQ=48.96;MQ0=30;MQRankSum=1.172;QD=14.81;ReadPosRankSum=2.167;VQSLOD=4.5000;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:21:48.03:0,48,828	1/1:8,0:8:17.80:143,18,0	0/0:103,0:23:8.81:0,9,481	0/0:112,0:19:27.05:0,27,488	1/1:20,0:20:30.91:320,31,0	1/1:22,0:22:35.99:403,36,0	1/1:25,0:24:26.28:360,26,0	0/1:23,0:23:2.71:3,0,305	1/1:6,8:15:9.03:152,9,0	1/1:27,0:26:52.90:469,53,0	1/1:20,0:20:37.18:271,37,0	1/1:13,0:12:2.37:8,2,0	1/1:15,0:15:10.06:160,10,0	1/1:21,0:20:35.40:332,35,0	0/0:20,0:20:50.96:0,51,926	1/1:21,0:20:1.21:299,1,0	0/0:11,0:10:18.52:0,19,284	1/1:13,0:11:21.25:214,21,0	1/1:13,0:13:22.50:213,22,0	1/1:20,0:20:27.45:273,27,0	1/1:19,0:18:25.36:229,25,0	1/1:29,0:29:42.47:490,42,0	1/1:17,0:17:32.93:377,33,0	1/1:21,0:21:33.07:376,33,0	1/1:23,0:23:40.76:411,41,0	1/1:23,0:23:47.57:461,48,0	1/1:26,0:24:52.74:463,53,0	1/1:10,0:10:21.73:162,22,0
chr10	25612695	.	T	TTCTCTC	13035.79	PASS	AB=1.000;AC=47;AF=0.839;AN=56;BaseQRankSum=1.607;DP=668;FS=22.559;HRun=0;HaplotypeScore=146.6280;InbreedingCoeff=0.8266;MQ=48.65;MQ0=30;MQRankSum=0.396;QD=29.10;ReadPosRankSum=-0.291;VQSLOD=2.4441;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:26:6.24:0,6,603	1/1:9,0:9:20.96:278,21,0	0/0:80,0:15:9.12:0,9,420	0/0:93,0:14:27.02:0,27,396	1/1:20,0:20:35.90:597,36,0	1/1:20,1:21:43.34:714,43,0	1/1:25,0:23:56.14:793,56,0	1/1:19,0:19:13.28:87,13,0	1/1:15,1:15:12.02:230,12,0	1/1:27,0:26:71.79:1029,72,0	1/1:20,0:20:44.13:519,44,0	1/1:3,9:11:3:26,3,0	1/1:5,11:17:12.75:226,13,0	1/1:22,0:21:42.04:653,42,0	0/0:18,0:18:51:0,51,768	1/1:22,0:21:38.65:630,39,0	0/1:11,0:10:1.32:1,0,217	1/1:12,0:10:24.04:390,24,0	1/1:12,0:12:29.78:447,30,0	1/1:17,0:17:38.51:577,39,0	1/1:17,0:16:29.99:461,30,0	1/1:25,2:27:72.26:991,72,0	1/1:16,1:17:44.68:719,45,0	1/1:21,0:21:38.30:637,38,0	1/1:25,0:25:50.87:816,51,0	1/1:23,0:23:62.77:947,63,0	1/1:26,0:24:57.16:902,57,0	1/1:10,0:10:27.01:367,27,0
chr10	25612697	.	CTT	C	5952.25	PASS	AB=0.984;AC=44;AF=0.786;AN=56;BaseQRankSum=1.956;DP=659;FS=35.908;HRun=3;HaplotypeScore=129.3153;InbreedingCoeff=0.2941;MQ=47.64;MQ0=30;MQRankSum=3.063;QD=12.48;ReadPosRankSum=2.624;VQSLOD=0.1672;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:27:32.66:33,0,351	1/1:9,0:9:17.91:140,18,0	0/0:74,0:14:17.69:0,18,250	0/0:85,0:14:26.84:0,27,231	1/1:21,1:22:35.35:282,35,0	0/1:19,0:19:37.81:184,0,38	1/1:25,1:24:59.42:480,59,0	1/1:21,0:21:58.76:457,59,0	1/1:12,2:13:7.37:69,7,0	1/1:25,1:25:25.83:465,26,0	0/1:19,1:20:4.04:153,0,4	1/1:13,0:12:2.94:18,3,0	1/1:15,2:17:1.59:92,2,0	1/1:20,1:20:41.79:345,42,0	0/0:19,0:19:49.52:0,50,452	1/1:21,1:21:32.35:318,32,0	0/1:12,0:11:19.25:35,0,19	1/1:12,0:10:21:136,21,0	1/1:12,0:12:22.49:167,22,0	1/1:15,2:17:36.18:288,36,0	1/1:17,0:16:24.09:192,24,0	0/1:27,0:27:45.30:329,0,45	1/1:15,2:17:40.89:359,41,0	0/1:20,1:21:10.18:182,0,10	1/1:23,0:23:0.17:292,0,0	1/1:25,0:25:32.79:311,33,0	1/1:24,1:23:56.27:445,56,0	1/1:9,0:9:23.80:180,24,0
chr10	25612699	.	T	TTC	1050.55	PASS	AB=0.981;AC=39;AF=0.750;AN=52;BaseQRankSum=0.356;DP=659;FS=20.780;HRun=0;HaplotypeScore=159.2398;InbreedingCoeff=0.0810;MQ=46.64;MQ0=30;MQRankSum=1.257;QD=2.26;ReadPosRankSum=1.118;VQSLOD=1.0171;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:26:10.33:74,10,0	0/1:10,0:10:0:0,0,0	./.	./.	1/1:22,0:23:2.97:23,3,0	0/0:18,0:18:10.60:0,11,68	1/1:27,0:25:5.74:66,6,0	1/1:23,0:23:1.72:4,2,0	0/1:13,0:12:2.56:39,0,3	0/1:29,0:28:16.27:105,0,16	0/1:21,0:21:17.87:18,0,24	0/1:10,0:9:0:0,0,0	1/1:18,0:18:0.60:56,1,0	1/1:19,0:18:3.01:35,3,0	0/1:16,4:20:13.55:38,0,14	1/1:23,0:22:6.43:65,6,0	0/1:12,0:11:1.26:1,0,102	1/1:12,0:10:4.35:27,4,0	1/1:15,0:15:5.21:18,5,0	1/1:18,0:18:8.96:105,9,0	1/1:17,0:16:2.99:23,3,0	0/0:26,0:27:6.78:0,7,102	1/1:17,0:17:16.71:122,17,0	0/1:21,0:21:18.26:62,0,18	0/1:24,0:24:33.96:47,0,34	1/1:26,0:26:27.26:162,27,0	1/1:26,0:25:8.89:77,9,0	1/1:9,0:9:3.76:17,4,0
chr10	25612701	.	C	CTCTT	5076.90	PASS	AB=0.953;AC=32;AF=0.571;AN=56;BaseQRankSum=4.052;DP=652;FS=7.556;HRun=0;HaplotypeScore=162.9094;InbreedingCoeff=0.0994;MQ=46.83;MQ0=29;MQRankSum=4.363;QD=11.83;ReadPosRankSum=5.952;VQSLOD=3.4483;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:26:37.08:0,37,278	1/1:9,0:9:16.38:124,16,0	0/0:65,0:11:13.98:0,14,192	0/0:74,0:10:20.88:0,21,167	1/1:23,0:23:15.46:296,15,0	0/1:17,0:17:50.63:233,0,51	1/1:27,0:25:22.41:354,22,0	0/0:21,0:21:48.84:0,49,395	0/1:14,0:13:15.56:35,0,16	0/1:28,1:28:45.56:376,0,46	0/1:6,16:23:7.37:243,0,7	1/1:10,0:9:2.34:8,2,0	0/1:17,0:17:33.78:34,0,52	1/1:19,0:18:32.30:302,32,0	0/0:20,0:20:39.43:0,39,339	0/1:23,0:22:10.96:274,0,11	0/0:13,0:11:20.95:0,21,301	1/1:12,0:10:10.87:139,11,0	0/1:16,0:16:18.64:124,0,19	1/1:19,0:19:17.17:246,17,0	1/1:16,0:15:25.36:229,25,0	0/1:27,1:28:70.97:369,0,71	0/1:17,0:17:14.97:278,0,15	0/1:22,0:22:57.08:247,0,57	0/1:24,1:25:48.71:370,0,49	0/1:26,1:27:45.15:266,0,45	1/1:27,0:25:7.48:388,7,0	1/1:9,0:9:19.53:141,20,0
chr10	25612808	.	AACACAC	A	3830.39	PASS	AB=0.824;AC=42;AF=0.778;AN=54;BaseQRankSum=2.556;DP=504;FS=11.672;HRun=0;HaplotypeScore=134.0895;InbreedingCoeff=0.5941;MQ=66.49;MQ0=15;MQRankSum=-2.775;QD=10.11;ReadPosRankSum=-2.657;VQSLOD=1.5200;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:12,0:20:0.35:1,0,0	1/1:1,6:8:11.95:143,12,0	0/0:30,0:16:2.98:0,3,22	0/0:44,0:32:6.88:0,7,68	1/1:9,13:24:16.16:231,16,0	1/1:10,14:24:23.92:289,24,0	1/1:14,0:14:5.94:42,6,0	0/0:21,0:18:12.04:0,12,277	1/1:9,6:14:6.90:124,7,0	0/1:11,2:14:18.25:150,0,18	1/1:10,8:17:23.81:219,24,0	1/1:10,9:20:14.96:191,15,0	1/1:5,4:10:17.95:302,18,0	1/1:10,10:20:17.91:220,18,0	0/0:5,0:13:24.06:0,24,530	1/1:7,5:13:12:185,12,0	0/0:9,0:15:15.05:0,15,405	1/1:4,2:6:5.98:81,6,0	1/1:14,0:14:5.88:88,6,0	1/1:11,11:22:17.94:204,18,0	1/1:15,2:15:6.31:79,6,0	1/1:14,13:28:24.26:181,24,0	1/1:7,11:18:14.83:139,15,0	0/1:11,2:14:12.30:90,0,12	1/1:4,13:18:29.66:241,30,0	1/1:13,6:20:24.84:363,25,0	1/1:8,9:17:17.98:266,18,0	./.
chr10	25613236	.	A	AT	1154.29	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-7.831;DP=568;FS=2.062;HRun=9;HaplotypeScore=51.6819;InbreedingCoeff=0.9563;MQ=75.68;MQ0=0;MQRankSum=-1.144;QD=22.20;ReadPosRankSum=-0.508;VQSLOD=4.1006;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,21:27:54.15:597,54,0	0/0:13,0:13:35.99:0,36,313	0/0:18,1:18:22.82:0,23,213	0/0:9,0:9:8.99:0,9,78	0/0:29,0:29:65.97:0,66,573	0/0:23,0:23:56.96:0,57,491	0/0:8,0:8:24:0,24,208	0/0:33,0:33:80.95:0,81,699	0/0:20,0:20:50.98:0,51,443	0/0:25,0:25:68.97:0,69,597	0/0:20,0:20:50.98:0,51,443	0/0:13,0:13:35.99:0,36,312	0/0:15,0:15:41.97:0,42,361	0/0:18,0:18:44.98:0,45,388	0/0:7,0:7:18:0,18,156	0/0:23,0:23:56.97:0,57,491	1/1:1,24:25:63.04:678,63,0	0/0:18,0:18:47.99:0,48,417	0/0:21,0:21:59.97:0,60,517	0/0:34,0:34:99:0,102,885	0/0:21,0:21:47.96:0,48,417	0/0:30,0:30:83.96:0,84,725	0/0:25,0:25:68.94:0,69,591	0/0:15,0:15:35.99:0,36,312	0/0:21,0:21:62.99:0,63,547	0/0:22,0:22:59.96:0,60,518	0/0:29,0:29:74.96:0,75,647	0/0:5,0:5:15:0,15,130
chr10	25613620	.	GA	G	14820.78	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=9.684;DP=615;FS=3.245;HRun=5;HaplotypeScore=60.3619;InbreedingCoeff=0.9822;MQ=93.91;MQ0=0;MQRankSum=-8.511;QD=30.81;ReadPosRankSum=6.364;VQSLOD=4.9080;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:75.22:0,75,994	1/1:2,10:12:30.08:340,30,0	0/0:21,0:21:54.10:0,54,683	0/0:33,0:34:90.12:0,90,1169	1/1:0,29:29:81.23:918,81,0	1/1:0,23:23:66.19:748,66,0	1/1:1,21:22:54.15:612,54,0	0/0:26,0:26:75.24:0,75,1014	1/1:1,22:23:63.18:714,63,0	1/1:1,26:27:75.20:842,75,0	1/1:1,21:22:60.17:680,60,0	1/1:1,10:11:30.09:340,30,0	1/1:0,14:14:42.12:476,42,0	1/1:0,23:23:60.17:680,60,0	0/0:24,0:24:72.24:0,72,985	1/1:1,17:18:51.15:578,51,0	1/1:3,24:27:69.19:777,69,0	1/1:0,5:5:15.04:170,15,0	1/1:1,18:19:54.14:602,54,0	1/1:0,39:39:99:1260,114,0	1/1:0,11:11:24.07:272,24,0	1/1:0,29:29:78.22:884,78,0	1/1:0,23:23:63.18:714,63,0	1/1:0,18:18:51.15:578,51,0	1/1:0,20:20:54.15:612,54,0	1/1:3,25:28:78.19:865,78,0	1/1:1,34:35:93.26:1054,93,0	1/1:0,3:3:9.03:102,9,0
chr10	25615036	.	TGATAGATAGATA	T	2366.43	PASS	AB=1.000;AC=23;AF=0.442;AN=52;BaseQRankSum=6.536;DP=503;FS=5.390;HRun=0;HaplotypeScore=215.7900;InbreedingCoeff=0.0468;MQ=57.03;MQ0=0;MQRankSum=-5.161;QD=6.92;ReadPosRankSum=-5.337;VQSLOD=0.7966;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:9,14:23:3.01:45,3,0	0/1:13,0:13:96.46:96,0,110	./.	./.	0/1:23,0:23:33.84:34,0,148	0/1:25,0:25:27.43:48,0,27	0/0:9,0:9:5.85:0,6,53	0/0:23,0:23:9.03:0,9,170	0/1:17,0:17:0.04:2,0,0	0/0:28,0:28:7.56:0,8,252	0/1:22,0:22:3.96:4,0,11	0/0:13,0:13:3.01:0,3,39	1/1:12,0:12:15.05:321,15,0	1/1:15,0:15:17.95:280,18,0	0/0:21,0:21:27.09:0,27,1268	1/1:12,0:12:12:197,12,0	0/0:18,0:18:18.06:0,18,421	0/0:3,0:3:2.99:0,3,23	0/1:21,0:21:29.55:30,0,51	1/1:32,0:32:26.79:386,27,0	0/0:17,0:17:8.92:0,9,94	0/1:15,0:15:28.90:29,0,54	0/1:31,0:31:99:147,0,238	0/0:8,0:8:6.02:0,6,101	0/1:15,0:15:51.55:52,0,72	0/1:25,0:25:99:433,0,148	0/1:35,0:34:99:363,0,102	1/1:6,0:6:3.01:63,3,0
chr10	25615079	.	TAGATAGATAGGATAGAC	T	7398.15	PASS	AB=1.000;AC=29;AF=0.537;AN=54;BaseQRankSum=2.834;DP=549;FS=1.021;HRun=0;HaplotypeScore=231.1637;InbreedingCoeff=-0.0240;MQ=56.72;MQ0=11;MQRankSum=0.125;QD=17.25;ReadPosRankSum=1.966;VQSLOD=3.8645;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:24.08:0,24,559	0/1:13,0:13:15.98:76,0,16	0/0:12,0:9:27.09:0,27,607	0/0:8,0:4:12.04:0,12,247	0/1:25,0:25:74.70:112,0,75	0/1:23,0:23:46.08:162,0,46	1/1:15,0:15:3.56:399,4,0	0/1:18,0:17:33.09:694,0,33	0/0:19,0:19:15.40:0,15,130	0/1:32,0:32:99:754,0,348	0/0:25,0:25:15.98:0,16,112	./.	1/1:16,1:17:15.05:346,15,0	1/1:21,0:21:18.06:289,18,0	0/0:17,0:17:36.12:0,36,2210	1/1:13,0:13:12.04:203,12,0	0/1:23,0:23:99:490,0,349	0/1:7,0:7:15.21:296,0,15	1/1:6,11:12:33.11:758,33,0	1/1:28,0:28:24.97:383,25,0	0/1:18,0:18:35.71:495,0,36	0/1:21,0:21:14.94:86,0,15	0/1:28,0:28:53.31:172,0,53	0/1:10,0:10:82.31:297,0,82	0/1:19,0:18:35.66:36,0,122	0/1:28,0:28:95.57:953,0,96	1/1:38,0:38:22.32:349,22,0	1/1:15,0:15:3.01:50,3,0
chr10	25615083	.	TAGATAGGATAGAC	T	12673.53	PASS	AB=1.000;AC=45;AF=0.833;AN=54;BaseQRankSum=5.650;DP=556;FS=3.997;HRun=0;HaplotypeScore=189.9245;InbreedingCoeff=0.7190;MQ=59.74;MQ0=11;MQRankSum=-3.038;QD=26.51;ReadPosRankSum=3.041;VQSLOD=4.0854;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:24.08:0,24,514	1/1:2,10:12:6.02:225,6,0	0/0:14,0:11:33.11:0,33,750	0/0:9,0:5:15.05:0,15,318	1/1:3,21:24:9.03:221,9,0	1/1:3,20:23:5.50:223,5,0	1/1:15,0:15:26.88:571,27,0	1/1:19,0:18:38.99:807,39,0	1/1:21,0:21:17.72:204,18,0	1/1:35,0:35:34.22:1291,34,0	1/1:25,0:25:20.93:273,21,0	./.	1/1:1,16:17:15.05:580,15,0	1/1:3,18:21:18.06:618,18,0	0/0:17,0:17:39.13:0,39,1831	1/1:0,13:13:12.04:424,12,0	0/1:24,0:24:99:632,0,128	1/1:7,0:7:21.07:421,21,0	1/1:16,0:11:33.11:691,33,0	1/1:2,27:29:27.09:898,27,0	1/1:18,0:18:36.11:704,36,0	1/1:1,20:21:6.02:150,6,0	1/1:3,22:25:17.67:508,18,0	1/1:10,0:10:18.52:342,19,0	1/1:21,1:21:11.93:195,12,0	1/1:3,25:28:66.21:1719,66,0	1/1:2,36:38:24.08:857,24,0	1/1:0,15:15:3.01:120,3,0
chr10	25615087	.	TAGGATAGAC	T	12246.87	PASS	AC=46;AF=0.852;AN=54;BaseQRankSum=6.551;DP=538;FS=6.281;HRun=0;HaplotypeScore=160.1509;InbreedingCoeff=0.8307;MQ=62.56;MQ0=10;MQRankSum=-3.551;QD=26.92;ReadPosRankSum=3.603;VQSLOD=3.6214;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:28.59:0,29,627	1/1:10,0:10:6.02:133,6,0	0/0:15,0:12:36.12:0,36,824	0/0:10,0:6:18.06:0,18,388	1/1:21,0:21:9.03:165,9,0	1/1:21,0:21:12.04:228,12,0	1/1:15,0:15:25.64:507,26,0	1/1:19,0:18:51.17:1053,51,0	1/1:1,19:20:18.06:518,18,0	1/1:1,34:35:99:2162,99,0	1/1:0,26:26:20.97:572,21,0	./.	1/1:17,0:17:15.05:368,15,0	1/1:20,0:20:18.06:396,18,0	0/0:18,0:18:39.13:0,39,1505	1/1:13,0:13:12.04:267,12,0	1/1:23,0:23:17.11:703,17,0	1/1:7,0:7:8.83:349,9,0	1/1:15,0:11:33.11:663,33,0	1/1:27,0:27:27.08:566,27,0	1/1:18,0:18:29.65:634,30,0	1/1:20,0:20:6.02:112,6,0	1/1:22,0:22:16.88:306,17,0	1/1:8,0:8:15.52:318,16,0	1/1:3,19:21:12.04:327,12,0	1/1:25,0:25:65.24:1307,65,0	1/1:36,0:36:24.07:518,24,0	1/1:15,0:15:3.01:74,3,0
chr10	25615088	.	AG	A	5221.45	PASS	AB=0.908;AC=41;AF=0.759;AN=54;BaseQRankSum=6.239;DP=534;FS=4.736;HRun=2;HaplotypeScore=143.0642;InbreedingCoeff=0.4588;MQ=62.73;MQ0=8;MQRankSum=-3.121;QD=11.58;ReadPosRankSum=5.061;VQSLOD=3.6343;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:30.01:0,30,393	0/1:10,0:10:1.96:3,0,2	0/0:15,0:12:36.12:0,36,524	0/0:10,0:6:18.06:0,18,254	1/1:21,0:21:9.03:112,9,0	1/1:20,1:21:12.04:153,12,0	1/1:2,13:15:4.17:288,4,0	1/1:1,18:18:51.16:648,51,0	1/1:20,0:20:15.75:111,16,0	1/1:35,0:35:80.73:855,81,0	1/1:26,0:26:18.82:179,19,0	./.	1/1:17,0:17:11.71:39,12,0	1/1:19,0:20:12.01:99,12,0	0/0:18,0:18:39.05:0,39,532	1/1:13,0:13:5.62:51,6,0	1/1:0,22:22:42:537,42,0	0/1:1,6:7:8.98:212,0,9	1/1:14,0:11:33.11:428,33,0	0/1:27,0:27:4.41:132,0,4	1/1:3,15:18:6.29:362,6,0	1/1:20,0:20:6.02:78,6,0	0/1:22,0:22:40.73:78,0,41	1/1:0,7:7:15.05:195,15,0	1/1:21,0:21:10.12:62,10,0	1/1:25,0:25:38.36:533,38,0	0/1:36,0:36:10.17:59,0,10	1/1:15,0:15:2.37:8,2,0
chr10	25617505	.	C	CTA	656.91	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=3.680;DP=481;FS=3.641;HRun=0;HaplotypeScore=82.1468;InbreedingCoeff=0.8600;MQ=83.86;MQ0=2;MQRankSum=-0.052;QD=9.38;ReadPosRankSum=0.251;VQSLOD=3.1290;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,14:22:17.92:240,18,0	0/0:8,0:8:20.98:0,21,232	0/0:26,0:19:21.30:0,21,282	0/0:26,0:19:2.96:0,3,171	0/0:17,0:17:20.69:0,21,169	0/0:23,0:23:48.08:0,48,496	0/0:22,0:22:42.04:0,42,441	1/1:26,0:26:53.68:284,54,0	0/0:16,0:16:39.06:0,39,399	0/0:16,0:15:33:0,33,337	0/0:14,0:14:23.91:0,24,224	0/0:16,0:15:21.03:0,21,205	0/0:20,0:20:24.01:0,24,229	0/0:12,0:12:17.99:0,18,172	1/1:21,0:21:51.06:273,51,0	0/0:18,0:18:30.07:0,30,328	0/0:20,0:20:26.94:0,27,260	0/0:7,0:7:21.01:0,21,209	0/0:22,0:22:55.79:0,56,528	0/0:21,0:21:41.84:0,42,374	0/0:15,0:16:32.96:0,33,324	0/0:12,0:12:17.88:0,18,186	0/0:17,0:18:38.70:0,39,369	0/0:22,0:22:36.07:0,36,370	0/0:4,0:4:11.91:0,12,103	0/0:19,0:19:39.06:0,39,387	0/0:12,0:11:21.02:0,21,196	0/0:4,0:4:3:0,3,27
chr10	25617506	.	TA	T	1815.28	PASS	AB=0.787;AC=45;AF=0.804;AN=56;BaseQRankSum=-1.359;DP=484;FS=0.000;HRun=16;HaplotypeScore=66.5591;InbreedingCoeff=0.1840;MQ=82.06;MQ0=2;MQRankSum=1.353;QD=4.18;ReadPosRankSum=3.503;VQSLOD=0.6301;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:23:26.63:0,27,140	0/1:3,6:9:7.13:64,0,7	0/1:24,0:18:2.09:2,0,27	0/0:24,0:18:4.37:0,4,45	1/1:8,8:17:1.45:17,1,0	0/1:11,13:25:19.71:103,0,20	1/1:5,14:23:25.04:127,25,0	1/1:6,17:25:43.24:256,43,0	0/1:8,7:16:2.67:52,0,3	0/1:11,4:15:35.18:35,0,57	1/1:2,11:13:14.20:89,14,0	1/1:7,10:16:5.59:36,6,0	1/1:7,13:20:8.49:54,8,0	1/1:3,8:11:8.68:54,9,0	1/1:7,13:21:32.48:241,32,0	1/1:5,12:18:8.41:87,8,0	0/1:7,1:21:7:7,0,66	1/1:4,3:7:8.70:50,9,0	1/1:11,10:22:0.19:104,0,0	1/1:7,11:19:3.40:91,3,0	1/1:7,8:16:16.12:94,16,0	1/1:3,8:12:9.47:68,9,0	1/1:11,7:19:16.09:94,16,0	1/1:5,14:21:5.80:99,6,0	0/1:5,0:5:0.71:1,0,20	1/1:11,8:19:14.25:86,14,0	1/1:6,6:11:5.68:36,6,0	1/1:1,3:4:2.88:16,3,0
chr10	25617831	.	A	AG	357.63	PASS	AB=0.872;AC=12;AF=0.214;AN=56;BaseQRankSum=1.735;DP=664;FS=0.000;HRun=0;HaplotypeScore=174.8594;InbreedingCoeff=-0.2525;MQ=42.10;MQ0=18;MQRankSum=-3.353;QD=0.97;ReadPosRankSum=-2.514;VQSLOD=1.8823;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:14:32.46:0,32,393	0/1:8,4:12:31.28:31,0,221	0/1:3,0:3:3.12:3,0,70	0/0:4,0:4:9.03:0,9,125	0/0:32,5:37:13.41:0,13,743	0/0:34,1:34:57.92:0,58,1014	0/0:9,1:8:17.43:0,17,152	0/0:16,0:13:39.12:0,39,511	0/0:16,0:16:33.15:0,33,364	0/1:43,5:43:67.79:68,0,1164	0/1:28,5:29:21.67:22,0,456	0/1:20,7:27:84.95:85,0,505	0/1:20,4:24:28.01:28,0,386	0/0:18,1:18:11.02:0,11,483	0/0:16,0:14:39.09:0,39,509	0/1:18,6:24:60.82:61,0,405	0/0:19,0:19:47.10:0,47,544	0/0:8,0:8:14.26:0,14,207	0/1:16,0:11:2.53:3,0,291	0/1:40,6:44:66.95:67,0,598	0/0:4,0:4:11.07:0,11,131	0/0:25,3:28:20.67:0,21,573	0/0:30,0:29:70.30:0,70,892	0/0:25,0:24:51.27:0,51,618	0/1:37,9:39:99:117,0,743	0/1:46,4:44:1.53:2,0,1259	0/1:33,6:35:12.25:12,0,746	0/0:11,1:11:10.17:0,10,376
chr10	25618033	.	CG	C	4396.72	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=8.593;DP=684;FS=0.000;HRun=1;HaplotypeScore=70.9312;InbreedingCoeff=0.9913;MQ=89.00;MQ0=0;MQRankSum=-0.307;QD=36.95;ReadPosRankSum=0.984;VQSLOD=5.1588;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,37:37:90.30:1257,90,0	0/0:10,0:10:30.10:0,30,478	0/0:23,0:23:48.63:0,49,942	0/0:31,0:30:89.87:0,90,1185	0/0:22,0:22:60.20:0,60,954	0/0:32,0:32:93.26:0,93,1454	0/0:24,0:24:72.25:0,72,1144	1/1:0,26:26:78.24:1055,78,0	0/0:24,0:24:69.18:0,69,1059	0/0:32,0:31:93.29:0,93,1432	0/0:19,0:19:57.17:0,57,863	0/0:17,0:17:51.06:0,51,724	0/0:26,0:26:75.26:0,75,1193	0/0:23,0:23:66.22:0,66,1048	1/1:0,35:35:99:1383,99,0	0/0:25,0:25:75.26:0,75,1195	1/1:1,20:21:43.26:702,43,0	0/0:5,0:5:12.04:0,12,178	0/0:24,0:24:72.18:0,72,1057	0/0:23,0:23:69.22:0,69,1072	0/0:35,0:35:99:0,102,1511	0/0:25,0:25:72.23:0,72,1119	0/0:27,0:27:72.16:0,72,1093	0/0:25,0:25:75.26:0,75,1196	0/0:41,0:41:99:0,120,1859	0/0:19,0:19:57.19:0,57,889	0/0:20,0:20:57.18:0,57,883	0/0:13,0:13:39.13:0,39,620
chr10	25618327	.	C	CA	14968.37	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-12.106;DP=513;FS=1.181;HRun=1;HaplotypeScore=46.0957;InbreedingCoeff=0.9818;MQ=82.66;MQ0=0;MQRankSum=-2.866;QD=40.67;ReadPosRankSum=3.855;VQSLOD=5.1195;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,102,1295	1/1:0,4:4:12.04:180,12,0	0/0:19,0:18:51.16:0,51,651	0/0:11,0:11:30.07:0,30,368	1/1:3,22:25:60.12:848,60,0	1/1:0,23:23:66.18:964,66,0	1/1:2,18:20:51.17:765,51,0	0/0:30,0:30:84.26:0,84,1076	1/1:0,12:12:30.10:450,30,0	1/1:0,17:17:51.17:762,51,0	1/1:0,20:20:54.18:809,54,0	1/1:0,24:24:63.21:944,63,0	1/1:0,23:23:66.22:989,66,0	1/1:0,12:12:30.10:450,30,0	0/0:23,0:23:66.20:0,66,843	1/1:2,15:17:42.14:630,42,0	0/0:26,0:26:78.21:0,78,980	1/1:0,10:10:27.09:405,27,0	1/1:0,23:23:69.23:1034,69,0	1/1:0,16:16:45.15:674,45,0	1/1:0,20:20:54.18:810,54,0	1/1:0,18:18:48.16:720,48,0	1/1:0,18:18:54.18:809,54,0	1/1:0,14:14:39.13:583,39,0	1/1:0,11:11:33.11:495,33,0	1/1:1,15:16:9.18:614,9,0	1/1:0,14:14:36.12:540,36,0	1/1:0,11:11:33.11:495,33,0
chr10	25618605	.	GT	G	2062.55	PASS	AB=0.759;AC=36;AF=0.692;AN=52;BaseQRankSum=0.321;DP=420;FS=6.958;HRun=11;HaplotypeScore=52.2503;InbreedingCoeff=0.5370;MQ=76.94;MQ0=9;MQRankSum=-0.872;QD=7.93;ReadPosRankSum=3.014;VQSLOD=1.6472;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:30.07:0,30,310	./.	0/0:41,0:14:25.07:0,25,189	0/0:36,0:17:17.79:0,18,151	1/1:17,4:21:29.52:195,30,0	1/1:6,16:22:23.61:196,24,0	0/1:3,8:11:21.63:40,0,22	0/0:41,1:42:41.17:0,41,555	0/0:3,3:6:0:0,0,0	1/1:3,7:10:23.93:193,24,0	1/1:9,1:10:11.89:90,12,0	0/1:7,1:8:11.67:39,0,12	1/1:14,4:18:14.95:123,15,0	1/1:1,8:9:5.99:49,6,0	0/0:14,0:14:14.98:0,15,139	1/1:3,10:13:8.78:74,9,0	0/1:29,1:30:16.16:16,0,222	1/1:2,8:10:17.86:147,18,0	0/1:5,10:15:5.10:163,0,5	1/1:3,4:7:8.58:60,9,0	1/1:7,0:7:9.77:95,10,0	1/1:4,6:10:11.92:93,12,0	1/1:7,3:10:22.72:163,23,0	1/1:3,5:8:5.98:46,6,0	1/1:4,16:21:14.63:122,15,0	1/1:11,1:12:29.88:236,30,0	1/1:7,1:8:11.83:98,12,0	./.
chr10	25618616	.	TC	T	1293.73	PASS	AB=0.970;AC=31;AF=0.574;AN=54;BaseQRankSum=2.355;DP=495;FS=5.325;HRun=1;HaplotypeScore=55.7504;InbreedingCoeff=-0.1709;MQ=65.68;MQ0=11;MQRankSum=1.137;QD=3.17;ReadPosRankSum=3.092;VQSLOD=0.1221;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:12.29:0,12,131	0/0:3,0:3:4.88:0,5,15	0/0:47,1:10:16.98:0,17,132	0/1:40,2:14:16.06:16,0,93	1/1:7,22:29:26.49:208,26,0	0/1:23,1:24:16.03:92,0,16	0/1:14,0:14:22.51:23,0,24	0/1:35,0:35:99:103,0,238	1/1:9,0:9:9.62:85,10,0	0/1:12,1:13:19.48:72,0,19	0/1:12,9:21:38.08:38,0,82	1/1:4,2:6:6.79:49,7,0	1/1:5,12:17:6.05:48,6,0	1/1:11,0:11:11.31:65,11,0	0/0:15,0:15:16.53:0,17,106	0/1:15,0:15:20.53:51,0,21	0/1:33,0:33:5.22:5,0,117	1/1:11,0:11:1.32:71,1,0	0/1:19,0:18:45.38:64,0,45	1/1:12,0:12:8.14:117,8,0	0/1:6,0:6:3.32:3,0,5	0/1:10,0:10:14.30:14,0,47	0/1:15,0:15:54:66,0,54	0/1:11,0:11:11.63:12,0,40	0/1:22,0:22:11.12:46,0,11	0/1:21,0:21:47.73:119,0,48	1/1:12,0:12:9.04:92,9,0	./.
chr10	25619414	.	A	AT	8161.65	PASS	AB=0.624;AC=42;AF=0.750;AN=56;BaseQRankSum=-12.493;DP=638;FS=4.172;HRun=11;HaplotypeScore=77.8646;InbreedingCoeff=0.7292;MQ=71.33;MQ0=0;MQRankSum=-1.503;QD=16.79;ReadPosRankSum=1.449;VQSLOD=5.9401;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:34:48.87:0,49,141	1/1:2,7:10:23.88:227,24,0	0/0:11,0:12:5.49:0,5,64	0/0:11,0:11:20.87:0,21,157	1/1:6,28:35:68.79:640,69,0	1/1:4,27:32:37.53:729,38,0	1/1:1,15:16:27.01:263,27,0	0/0:8,0:33:47.58:0,48,152	1/1:14,9:24:54.91:476,55,0	1/1:8,13:22:42.07:417,42,0	1/1:4,21:27:65.68:605,66,0	1/1:3,15:18:33.07:335,33,0	1/1:6,18:24:6.92:242,7,0	1/1:13,6:20:40.04:338,40,0	0/0:6,0:23:32.56:0,33,94	1/1:10,13:23:53.74:509,54,0	0/0:4,0:39:65.17:0,65,188	1/1:4,15:19:0.84:190,1,0	1/1:7,2:18:24.36:139,24,0	1/1:4,3:27:53.61:328,54,0	1/1:9,1:15:27.76:156,28,0	1/1:5,22:28:59.95:592,60,0	0/1:11,13:24:30.64:265,0,31	1/1:2,21:23:42.08:426,42,0	1/1:2,18:20:39.08:396,39,0	1/1:4,21:25:39.78:547,40,0	1/1:6,20:26:6.78:235,7,0	0/1:3,6:9:8.21:107,0,8
chr10	25619832	.	C	CAAAAA	5805.98	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-2.240;DP=370;FS=13.102;HRun=15;HaplotypeScore=74.5608;InbreedingCoeff=0.6304;MQ=51.34;MQ0=17;MQRankSum=-3.528;QD=19.04;ReadPosRankSum=-1.099;VQSLOD=0.6195;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:14,3:21:25.90:452,26,0	1/1:2,3:6:9.03:157,9,0	0/0:22,0:12:1.97:0,2,86	0/0:7,0:3:3.25:0,3,15	1/1:14,2:17:18.53:346,19,0	1/1:3,2:10:21.07:445,21,0	1/1:4,2:5:14.79:259,15,0	1/1:13,0:12:26.22:293,26,0	1/1:8,0:7:15.05:227,15,0	1/1:14,1:16:10.85:186,11,0	1/1:9,4:17:9.90:274,10,0	1/1:6,0:6:8.05:76,8,0	1/1:7,0:7:11.38:99,11,0	1/1:8,0:6:8.92:101,9,0	1/1:6,0:11:20.07:194,20,0	1/1:5,1:12:12.01:178,12,0	0/0:12,0:32:33.72:0,34,244	1/1:7,2:11:14.26:194,14,0	1/1:10,0:9:10.28:129,10,0	1/1:9,3:14:17.49:311,17,0	1/1:5,0:4:6.02:95,6,0	1/1:1,2:5:9.86:137,10,0	1/1:10,1:13:23.11:406,23,0	1/1:7,1:9:11.61:98,12,0	1/1:17,0:19:18.01:261,18,0	1/1:12,1:18:18.03:274,18,0	1/1:16,1:15:29.37:495,29,0	1/1:5,1:6:6.02:118,6,0
chr10	25620040	.	T	TA	4101.46	PASS	AB=0.587;AC=37;AF=0.685;AN=54;BaseQRankSum=-3.327;DP=314;FS=3.818;HRun=11;HaplotypeScore=55.3364;InbreedingCoeff=0.5132;MQ=57.39;MQ0=16;MQRankSum=0.587;QD=19.35;ReadPosRankSum=0.742;VQSLOD=4.7829;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:42.36:0,42,383	1/1:1,4:5:9.02:91,9,0	0/0:5,0:5:8.83:0,9,61	0/0:2,0:2:5.97:0,6,44	1/1:7,6:13:23.86:217,24,0	1/1:0,9:10:20.20:238,20,0	0/1:2,8:9:2.22:151,0,2	0/0:29,0:27:59.87:0,60,435	1/1:2,7:8:0.88:190,1,0	0/1:3,9:12:2.06:161,0,2	1/1:3,14:17:36.07:366,36,0	1/1:0,4:3:9.02:91,9,0	1/1:4,4:8:20.99:196,21,0	1/1:0,6:6:18.04:183,18,0	0/0:11,0:10:28.93:0,29,215	1/1:0,6:7:8.12:116,8,0	0/0:22,0:24:55.75:0,56,419	0/1:2,5:6:5.24:123,0,5	1/1:5,9:14:6.84:246,7,0	1/1:7,9:16:6.82:249,7,0	0/1:4,5:8:5.17:134,0,5	./.	0/1:2,5:7:8.19:107,0,8	1/1:1,5:5:12.02:122,12,0	1/1:2,8:10:3.82:220,4,0	1/1:4,10:14:6.81:245,7,0	1/1:3,11:14:32.98:321,33,0	1/1:1,11:11:33.07:335,33,0
chr10	25620176	.	T	TCA	2028.78	PASS	AB=0.990;AC=52;AF=0.963;AN=54;BaseQRankSum=-2.032;DP=236;FS=6.893;HRun=0;HaplotypeScore=61.5165;InbreedingCoeff=-0.0838;MQ=77.16;MQ0=10;MQRankSum=-3.829;QD=8.63;ReadPosRankSum=1.735;VQSLOD=1.8531;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,0:8:17.46:97,17,0	1/1:3,0:3:5.96:45,6,0	0/1:32,0:13:24.95:25,0,210	0/1:49,0:12:23.45:23,0,47	1/1:11,0:10:8.85:62,9,0	1/1:9,0:9:26.43:166,26,0	1/1:7,0:7:14.66:102,15,0	1/1:13,0:13:35.51:231,36,0	1/1:2,0:2:5.85:35,6,0	1/1:4,0:4:8.82:54,9,0	1/1:7,0:7:17.15:105,17,0	1/1:3,0:3:5.85:34,6,0	1/1:3,0:3:8.94:67,9,0	1/1:2,0:2:5.89:39,6,0	1/1:9,0:9:20.61:135,21,0	1/1:2,0:2:2.92:17,3,0	1/1:4,0:4:11.73:69,12,0	1/1:7,0:7:13.10:87,13,0	1/1:3,4:7:20.52:168,21,0	1/1:8,0:8:17.63:120,18,0	1/1:3,0:3:2.80:17,3,0	./.	1/1:8,0:7:5.68:28,6,0	1/1:3,0:3:2.72:16,3,0	1/1:6,0:6:5.83:33,6,0	1/1:5,0:5:14.80:125,15,0	1/1:14,0:12:29.43:187,29,0	1/1:3,0:3:4.81:42,5,0
chr10	25620177	.	C	CA	1772.21	PASS	AB=0.990;AC=50;AF=0.962;AN=52;BaseQRankSum=-1.750;DP=218;FS=4.498;HRun=0;HaplotypeScore=52.0867;InbreedingCoeff=-0.0640;MQ=78.79;MQ0=12;MQRankSum=-4.036;QD=8.32;ReadPosRankSum=2.066;VQSLOD=2.9989;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,0:6:14.69:89,15,0	1/1:2,0:2:5.95:44,6,0	0/1:37,0:13:16.83:17,0,165	0/1:47,0:11:11.88:12,0,34	1/1:1,10:10:8.89:79,9,0	1/1:9,0:9:26.60:176,27,0	1/1:4,0:4:11.80:75,12,0	1/1:8,0:8:20.74:138,21,0	1/1:2,0:2:5.88:36,6,0	1/1:4,0:4:8.91:61,9,0	1/1:7,0:7:19.63:114,20,0	1/1:3,0:3:8.58:47,9,0	1/1:3,0:3:8.92:67,9,0	1/1:2,0:2:5.94:42,6,0	1/1:8,0:8:20.67:137,21,0	1/1:2,0:2:2.94:18,3,0	1/1:3,0:3:8.83:54,9,0	1/1:7,0:7:4.22:80,4,0	1/1:4,0:4:11.90:86,12,0	1/1:9,0:8:17.71:115,18,0	1/1:3,0:3:2.67:18,3,0	./.	./.	1/1:3,0:3:2.92:17,3,0	1/1:6,0:5:2.94:18,3,0	1/1:4,0:4:11.91:95,12,0	1/1:13,0:11:29.50:189,29,0	1/1:3,0:3:7.21:48,7,0
chr10	25624882	.	AAG	A	2694.12	PASS	AB=0.913;AC=42;AF=0.808;AN=52;BaseQRankSum=1.805;DP=582;FS=4.002;HRun=0;HaplotypeScore=72.8574;InbreedingCoeff=0.3336;MQ=68.43;MQ0=9;MQRankSum=3.193;QD=5.82;ReadPosRankSum=0.590;VQSLOD=2.3462;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:45:8.93:0,9,79	1/1:4,3:7:6.02:67,6,0	0/1:25,0:19:0.17:0,0,0	0/0:37,0:16:0.47:0,0,1	1/1:13,7:19:8.97:86,9,0	1/1:12,2:14:2.59:125,3,0	1/1:5,13:19:26.91:282,27,0	0/1:19,0:19:10.75:11,0,75	1/1:13,11:24:6.02:67,6,0	1/1:5,7:12:17.99:169,18,0	1/1:11,11:23:14.83:135,15,0	1/1:13,4:17:6.02:68,6,0	1/1:12,9:21:3.01:34,3,0	1/1:9,6:16:8.86:81,9,0	0/0:13,0:27:20.96:0,21,175	1/1:11,8:19:20.89:215,21,0	0/1:30,4:35:15.01:15,0,752	./.	1/1:15,0:15:5.03:58,5,0	1/1:16,3:19:12.02:126,12,0	1/1:11,9:20:12.03:134,12,0	1/1:18,3:22:26.73:256,27,0	1/1:12,6:18:5.85:48,6,0	1/1:19,16:35:35.93:383,36,0	0/1:10,4:14:36.42:58,0,36	1/1:14,7:21:13.19:148,13,0	1/1:13,15:28:24.07:268,24,0	./.
chr10	25625903	.	GAA	G	11329.66	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-3.904;DP=566;FS=2.012;HRun=13;HaplotypeScore=117.9798;InbreedingCoeff=0.7964;MQ=74.25;MQ0=0;MQRankSum=-3.744;QD=21.58;ReadPosRankSum=4.762;VQSLOD=4.2151;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,11:16:35.98:340,36,0	1/1:1,2:3:2.93:29,3,0	0/0:25,0:23:39.84:0,40,386	0/0:13,1:9:1.84:0,2,93	1/1:9,17:26:38.55:377,39,0	1/1:3,20:23:59.98:580,60,0	1/1:5,14:19:26.83:262,27,0	1/1:6,27:33:74.78:714,75,0	1/1:4,10:14:23.74:232,24,0	1/1:4,24:28:71.58:679,72,0	1/1:3,28:31:74.93:726,75,0	1/1:1,12:13:27.04:262,27,0	1/1:3,15:18:41.84:407,42,0	1/1:5,19:24:50.77:494,51,0	1/1:1,19:20:48.01:463,48,0	1/1:3,20:23:50.93:494,51,0	1/1:4,12:16:29.93:291,30,0	1/1:2,9:11:27:262,27,0	1/1:2,16:18:47.95:464,48,0	1/1:3,35:38:95.99:926,96,0	1/1:1,14:15:35.98:337,36,0	1/1:3,16:19:38.71:365,39,0	1/1:4,16:21:44.31:408,44,0	1/1:1,10:11:23.99:233,24,0	1/1:1,25:26:60:581,60,0	1/1:1,17:18:51.08:494,51,0	1/1:1,17:19:53.82:503,54,0	1/1:0,21:21:42.07:407,42,0
chr10	25627626	.	AT	A	8074.92	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=3.915;DP=466;FS=0.000;HRun=8;HaplotypeScore=72.5798;InbreedingCoeff=0.9425;MQ=62.72;MQ0=9;MQRankSum=-0.144;QD=23.27;ReadPosRankSum=3.952;VQSLOD=5.4419;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:22:53.93:0,54,596	1/1:3,12:15:33.04:318,33,0	0/0:10,0:8:16.94:0,17,154	0/0:7,0:7:20.80:0,21,222	1/1:4,23:26:69.10:664,69,0	1/1:1,16:16:48.08:463,48,0	1/1:1,9:10:24.04:232,24,0	0/0:28,0:26:60.15:0,60,694	1/1:2,7:9:21.03:203,21,0	1/1:3,12:15:36.03:341,36,0	1/1:0,18:18:48.07:464,48,0	1/1:3,19:21:51.08:490,51,0	1/1:0,12:11:33.05:318,33,0	1/1:1,16:17:39.06:376,39,0	0/0:14,0:13:39.09:0,39,444	1/1:3,12:14:33.05:319,33,0	0/0:35,0:35:87.25:0,87,1036	1/1:4,19:19:45.07:434,45,0	1/1:5,8:12:24.03:232,24,0	1/1:3,22:25:65.98:610,66,0	1/1:1,4:5:9.01:87,9,0	1/1:2,2:4:6:58,6,0	1/1:2,12:14:36.06:348,36,0	1/1:1,3:3:6.01:58,6,0	1/1:3,18:21:53.45:501,53,0	1/1:2,20:21:57.09:550,57,0	1/1:1,24:25:69.11:664,69,0	1/1:2,12:14:36.06:348,36,0
chr10	25628031	.	A	AGGGG	9117.73	PASS	AC=42;AF=0.778;AN=54;BaseQRankSum=2.216;DP=486;FS=0.446;HRun=7;HaplotypeScore=147.5463;InbreedingCoeff=0.8483;MQ=72.75;MQ0=2;MQRankSum=-12.217;QD=27.55;ReadPosRankSum=-3.961;VQSLOD=0.7075;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,114,1734	./.	0/0:16,0:14:30.06:0,30,441	0/0:31,0:21:31.33:0,31,656	1/1:6,5:13:9.03:194,9,0	1/1:11,0:11:12.04:231,12,0	1/1:10,15:29:44.75:978,45,0	0/0:13,0:13:33.09:0,33,505	1/1:7,5:14:24.08:507,24,0	1/1:13,6:19:23.98:366,24,0	1/1:11,0:13:3.01:57,3,0	1/1:11,7:23:54.10:1164,54,0	1/1:9,9:19:30.07:691,30,0	1/1:12,6:16:27.09:635,27,0	0/0:25,0:25:66.20:0,66,1029	1/1:10,3:15:27.09:565,27,0	0/0:28,0:28:69.15:0,69,1025	1/1:11,2:15:23.98:386,24,0	1/1:9,4:13:24.08:504,24,0	1/1:17,2:20:18.02:357,18,0	1/1:5,2:11:11.83:193,12,0	1/1:8,5:13:15.05:302,15,0	1/1:8,5:14:6.02:150,6,0	1/1:5,5:12:15.05:338,15,0	1/1:7,3:10:3.01:75,3,0	1/1:10,5:16:21.06:386,21,0	1/1:15,7:26:45.15:1000,45,0	1/1:2,0:3:3.01:38,3,0
chr10	25628116	.	G	GAA	687.65	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-5.710;DP=566;FS=7.157;HRun=9;HaplotypeScore=115.0484;InbreedingCoeff=0.9791;MQ=68.54;MQ0=6;MQRankSum=1.843;QD=24.56;ReadPosRankSum=-3.959;VQSLOD=1.9526;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,119,1219	0/0:10,0:9:23.95:0,24,245	0/0:14,0:12:32.21:0,32,275	0/0:16,0:14:35.07:0,35,300	0/0:25,0:24:69.16:0,69,724	0/0:20,0:20:55:0,55,568	0/0:19,0:18:45.10:0,45,479	1/1:9,19:27:57.14:783,57,0	0/0:16,0:16:42.10:0,42,447	0/0:18,0:18:26.87:0,27,478	0/0:16,0:14:32.73:0,33,329	0/0:12,0:12:27.06:0,27,287	0/0:25,0:25:69.12:0,69,714	0/0:16,0:15:41.97:0,42,430	0/0:22,0:22:54.09:0,54,566	0/0:14,0:14:33.08:0,33,351	0/0:38,0:38:99:0,108,1123	0/0:20,0:20:43.46:0,43,513	0/0:17,0:19:44.76:0,45,510	0/0:21,0:20:42.52:0,43,440	0/0:33,0:33:81.12:0,81,859	0/0:18,0:18:51.11:0,51,528	0/0:21,0:20:54.08:0,54,549	0/0:24,0:24:57.10:0,57,605	0/0:19,0:18:46.80:0,47,500	0/0:17,0:16:42.09:0,42,446	0/0:14,0:13:36.08:0,36,374	0/0:7,0:7:15.02:0,15,158
chr10	25628557	.	G	GT	14672.72	PASS	AB=0.541;AC=43;AF=0.768;AN=56;BaseQRankSum=-9.360;DP=668;FS=3.796;HRun=8;HaplotypeScore=66.2354;InbreedingCoeff=0.9096;MQ=79.36;MQ0=0;MQRankSum=-3.573;QD=28.16;ReadPosRankSum=4.164;VQSLOD=5.3748;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,111,1016	1/1:3,13:16:39.12:450,39,0	0/0:20,0:20:44.97:0,45,400	0/0:16,0:16:12.94:0,13,244	1/1:3,26:30:77.98:850,78,0	1/1:2,29:30:81.24:935,81,0	1/1:2,13:16:41.96:465,42,0	0/0:33,0:33:65.99:0,66,588	1/1:4,19:23:57.17:658,57,0	1/1:2,20:22:35.72:663,36,0	1/1:5,20:26:59.97:657,60,0	1/1:5,13:18:39.10:435,39,0	1/1:2,25:27:72.21:831,72,0	1/1:4,15:19:20.68:492,21,0	0/0:13,0:13:39:0,39,351	1/1:2,23:25:60.18:692,60,0	0/0:26,0:26:69.48:0,69,626	1/1:0,14:14:42.12:485,42,0	1/1:7,21:28:38.71:689,39,0	1/1:3,20:23:60.14:677,60,0	0/1:3,17:20:6.79:437,0,7	1/1:4,31:35:90.23:1024,90,0	1/1:4,27:31:72.21:831,72,0	1/1:3,23:26:69.21:796,69,0	1/1:0,29:29:69.21:796,69,0	1/1:3,21:24:63.18:717,63,0	1/1:2,27:30:75.18:851,75,0	1/1:0,8:8:21.06:242,21,0
chr10	25629710	.	CTT	C	6043.14	PASS	AB=0.613;AC=50;AF=0.893;AN=56;BaseQRankSum=-3.208;DP=500;FS=14.047;HRun=15;HaplotypeScore=83.2384;InbreedingCoeff=0.5154;MQ=80.16;MQ0=5;MQRankSum=0.182;QD=13.67;ReadPosRankSum=5.341;VQSLOD=2.2884;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,0:24:7.91:102,8,0	1/1:3,6:10:10.90:148,11,0	0/0:36,0:21:2.39:0,2,147	0/0:21,0:14:20.83:0,21,227	1/1:2,12:17:20.29:258,20,0	1/1:1,14:17:14.50:278,14,0	1/1:3,9:14:14.53:162,15,0	1/1:6,8:18:9.75:159,10,0	1/1:5,14:20:35.68:301,36,0	1/1:5,15:20:44.79:380,45,0	1/1:1,13:15:32.61:276,33,0	1/1:2,9:11:23.92:211,24,0	1/1:5,10:17:20.54:214,21,0	1/1:1,9:10:13.07:174,13,0	1/1:3,0:20:30.50:137,31,0	1/1:3,15:21:30.20:316,30,0	0/1:7,1:21:4.99:5,0,62	1/1:7,10:17:24.40:212,24,0	1/1:6,8:14:7.15:219,7,0	1/1:0,13:15:44.48:366,44,0	0/1:6,1:15:6.93:94,0,7	1/1:1,12:14:29.66:249,30,0	1/1:5,13:21:44.02:352,44,0	1/1:4,8:13:25.01:220,25,0	1/1:9,15:26:10.32:327,10,0	1/1:3,17:23:53.19:442,53,0	1/1:6,15:23:9.85:309,10,0	1/1:1,5:6:14.98:132,15,0
chr10	25629894	.	CCACCCA	C	8081.63	PASS	AC=40;AF=0.800;AN=50;BaseQRankSum=-1.155;DP=549;FS=0.801;HRun=0;HaplotypeScore=142.0618;InbreedingCoeff=0.6977;MQ=75.92;MQ0=4;MQRankSum=-4.266;QD=21.55;ReadPosRankSum=4.841;VQSLOD=4.5980;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:22,14:36:14.98:312,15,0	1/1:4,2:6:5.90:86,6,0	0/0:33,0:28:23.93:0,24,485	0/0:38,0:31:1.59:0,2,582	0/0:11,5:16:0:0,0,0	1/1:7,13:20:36.12:747,36,0	1/1:9,14:23:24.08:499,24,0	1/1:13,8:20:24.05:360,24,0	1/1:5,11:16:30.10:622,30,0	1/1:9,6:15:21.03:307,21,0	1/1:4,8:12:3.01:62,3,0	1/1:15,18:32:39.13:812,39,0	1/1:8,11:19:21.07:437,21,0	1/1:11,13:24:29.94:624,30,0	1/1:4,13:17:27.09:562,27,0	1/1:6,4:8:9.03:187,9,0	0/0:10,0:22:32.93:0,33,524	1/1:12,6:18:12.04:250,12,0	1/1:6,7:13:24.04:421,24,0	1/1:2,6:8:5.30:124,5,0	0/0:34,12:46:0.42:0,0,1	1/1:6,9:15:10.28:247,10,0	./.	1/1:11,17:28:21.07:437,21,0	./.	1/1:9,14:23:30.08:550,30,0	1/1:9,9:17:21.07:437,21,0	./.
chr10	25630974	.	TTC	T	928.40	PASS	AB=0.958;AC=36;AF=0.857;AN=42;BaseQRankSum=1.206;DP=497;FS=0.000;HRun=0;HaplotypeScore=66.2378;InbreedingCoeff=0.2371;MQ=65.42;MQ0=24;MQRankSum=-0.831;QD=2.99;ReadPosRankSum=0.188;VQSLOD=1.4444;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:14,2:15:11.98:108,12,0	1/1:10,0:9:2.98:21,3,0	./.	./.	./.	1/1:20,1:20:8.99:79,9,0	1/1:15,1:14:6.45:52,6,0	./.	1/1:16,1:17:8.84:71,9,0	1/1:17,2:19:9.02:96,9,0	./.	0/1:10,0:11:8.13:8,0,38	1/1:12,0:11:5.34:38,5,0	1/1:10,0:10:3.01:32,3,0	1/1:16,0:15:17.29:95,17,0	1/1:8,1:9:6.02:64,6,0	1/1:15,0:16:2.84:14,3,0	1/1:13,0:10:2.84:14,3,0	1/1:13,0:15:5.68:28,6,0	1/1:12,0:12:3.01:32,3,0	1/1:26,1:26:3.48:33,3,0	0/0:13,0:13:5.82:0,6,33	1/1:20,0:18:2.90:17,3,0	1/1:23,2:23:26.79:237,27,0	./.	0/1:20,0:20:3.42:3,0,63	0/0:18,0:18:3:0,3,26	./.
chr10	25631034	.	CATGTGTGTGTGT	C	6836.46	PASS	AB=0.946;AC=46;AF=0.821;AN=56;BaseQRankSum=6.358;DP=474;FS=2.440;HRun=0;HaplotypeScore=111.8897;InbreedingCoeff=0.3881;MQ=36.87;MQ0=56;MQRankSum=-3.255;QD=17.09;ReadPosRankSum=0.950;VQSLOD=3.6614;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:18,0:17:23.10:23,0,34	1/1:1,1:7:8.77:217,9,0	0/0:34,0:1:2.98:0,3,22	0/1:29,0:2:1.09:1,0,7	1/1:4,13:14:2.72:47,3,0	1/1:4,22:25:26.61:712,27,0	1/1:4,0:12:5.91:73,6,0	0/0:17,0:17:47.71:0,48,601	1/1:6,14:17:32.98:972,33,0	1/1:4,12:16:37.58:782,38,0	1/1:2,0:6:0.47:1,0,0	1/1:1,9:11:11.91:229,12,0	1/1:3,15:18:20.53:568,21,0	1/1:2,7:8:7.27:234,7,0	0/1:15,0:13:20.50:27,0,21	1/1:3,17:19:17.54:388,18,0	0/0:23,0:18:39:0,39,1739	1/1:4,12:15:11.84:248,12,0	0/1:12,1:14:73.16:226,0,73	1/1:1,10:14:14.70:275,15,0	1/1:9,0:13:2.90:16,3,0	1/1:11,2:13:6.41:71,6,0	1/1:16,0:15:1.25:3,1,0	1/1:11,18:25:14.68:89,15,0	1/1:1,10:13:12.04:404,12,0	1/1:0,16:17:33.28:707,33,0	1/1:8,2:8:17.12:272,17,0	1/1:3,2:4:8.95:251,9,0
chr10	25631035	.	ATGTGTGTG	A	2787.22	PASS	AB=1.000;AC=43;AF=0.860;AN=50;BaseQRankSum=5.795;DP=477;FS=10.171;HRun=0;HaplotypeScore=112.5045;InbreedingCoeff=0.4201;MQ=36.80;MQ0=57;MQRankSum=-3.531;QD=7.85;ReadPosRankSum=-0.730;VQSLOD=1.6554;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:19,2:19:2.89:38,3,0	1/1:7,0:7:6.02:106,6,0	./.	./.	1/1:17,0:14:0.47:1,0,0	1/1:27,0:25:21.05:284,21,0	1/1:13,0:12:3.01:56,3,0	0/0:16,0:16:5.98:0,6,77	1/1:22,0:18:24.04:402,24,0	1/1:17,0:16:18.01:298,18,0	1/1:6,0:6:0.47:1,0,0	1/1:11,0:11:6.36:64,6,0	1/1:19,0:18:15.05:279,15,0	1/1:9,0:8:6.02:111,6,0	1/1:8,6:13:6.02:130,6,0	1/1:20,0:19:9.03:167,9,0	0/0:23,0:18:30.10:0,30,1101	1/1:18,0:15:6.02:111,6,0	0/1:15,0:14:16.95:50,0,17	1/1:14,0:14:9.03:128,9,0	./.	1/1:14,0:13:0.47:2,0,0	0/1:15,0:14:0:0,0,0	0/1:30,0:26:0:0,0,0	1/1:13,0:13:12.04:217,12,0	1/1:17,0:17:18.39:266,18,0	1/1:10,0:8:5.74:84,6,0	1/1:5,0:4:6.02:112,6,0
chr10	25631941	.	CAAA	C	6689.05	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-3.658;DP=515;FS=1.130;HRun=16;HaplotypeScore=82.8667;InbreedingCoeff=0.8986;MQ=52.53;MQ0=7;MQRankSum=-1.668;QD=15.89;ReadPosRankSum=5.011;VQSLOD=3.7557;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,13:23:29.85:308,30,0	1/1:1,5:7:4.48:62,4,0	0/0:16,0:9:23.35:0,23,239	0/0:7,0:3:5.03:0,5,31	1/1:4,15:22:23.22:270,23,0	1/1:3,11:13:20.97:226,21,0	1/1:3,12:16:26.85:261,27,0	0/0:11,0:25:51.17:0,51,732	1/1:3,9:15:16.31:218,16,0	1/1:8,18:27:41.74:493,42,0	1/1:4,23:27:62.84:649,63,0	1/1:4,11:14:30.06:320,30,0	1/1:3,10:13:21:226,21,0	1/1:10,3:12:10.37:126,10,0	0/0:9,0:18:32.87:0,33,320	1/1:5,15:19:38.93:419,39,0	0/0:26,0:25:60.16:0,60,926	1/1:7,17:26:53.93:552,54,0	1/1:6,6:15:14.82:173,15,0	1/1:6,15:23:32.65:316,33,0	1/1:4,9:12:14.02:160,14,0	1/1:3,10:15:26.83:261,27,0	1/1:6,7:14:16.34:191,16,0	1/1:3,13:17:32.97:341,33,0	1/1:6,14:19:20.86:226,21,0	1/1:6,12:20:29.87:335,30,0	1/1:7,18:27:44.63:460,45,0	1/1:5,5:8:8.94:97,9,0
chr10	25633999	.	G	GTT	321.66	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.124;DP=447;FS=0.000;HRun=9;HaplotypeScore=58.0474;InbreedingCoeff=0.8422;MQ=80.88;MQ0=0;MQRankSum=1.579;QD=29.24;ReadPosRankSum=-1.174;VQSLOD=3.2468;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:42.09:0,42,447	0/0:10,0:10:30.07:0,30,313	0/0:21,0:19:5.74:0,6,204	0/0:13,0:12:10.42:0,10,111	0/0:23,0:23:63.14:0,63,663	0/0:21,0:21:51.11:0,51,543	0/0:7,0:7:21.05:0,21,223	0/0:25,0:25:55:0,55,575	0/0:10,0:10:30.06:0,30,311	0/0:29,0:29:87.21:0,87,921	0/0:22,0:22:51.07:0,51,542	0/0:9,0:9:27.07:0,27,287	0/0:11,0:11:30.07:0,30,319	0/0:20,0:20:45.07:0,45,470	1/1:1,10:11:27.09:416,27,0	0/0:9,0:9:27.04:0,27,278	0/0:15,0:16:47.83:0,48,481	0/0:11,0:11:19.12:0,19,305	0/0:24,0:24:63.02:0,63,642	0/0:18,0:19:42.05:0,42,502	0/0:7,0:7:18.04:0,18,192	0/0:11,0:11:24.05:0,24,255	0/0:18,0:19:30.01:0,30,374	0/0:10,0:10:21.03:0,21,223	0/0:12,0:11:33.08:0,33,351	0/0:27,0:27:72.17:0,72,766	0/0:25,0:25:63.10:0,63,661	0/0:8,0:8:24.06:0,24,255
chr10	25634098	.	CA	C	4670.87	PASS	AB=0.728;AC=48;AF=0.857;AN=56;BaseQRankSum=-1.842;DP=491;FS=15.585;HRun=13;HaplotypeScore=62.4771;InbreedingCoeff=0.2958;MQ=77.65;MQ0=5;MQRankSum=-0.682;QD=10.91;ReadPosRankSum=3.909;VQSLOD=2.6653;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,15:18:9.60:233,10,0	0/1:4,2:6:12.90:13,0,49	0/1:45,1:23:46.75:47,0,63	0/0:33,1:19:20.53:0,21,127	0/1:5,12:17:42.41:214,0,42	1/1:4,18:23:17.60:283,18,0	1/1:5,6:11:0.82:109,1,0	1/1:5,0:21:31.43:90,31,0	1/1:2,3:6:12.51:76,13,0	1/1:7,14:21:16.40:259,16,0	1/1:8,22:30:62.57:458,63,0	1/1:4,4:8:14.07:94,14,0	1/1:4,6:10:15.37:111,15,0	1/1:8,6:15:19.83:137,20,0	1/1:7,1:13:18.86:73,19,0	1/1:1,17:18:41.76:306,42,0	0/0:25,3:28:6.41:0,6,545	1/1:1,8:9:2.51:94,3,0	0/1:9,14:24:30.71:278,0,31	1/1:5,11:16:23.76:174,24,0	1/1:0,8:8:17.90:131,18,0	1/1:1,6:7:17.89:131,18,0	1/1:2,17:20:37.82:269,38,0	1/1:0,13:13:23.86:175,24,0	1/1:2,13:15:26.82:197,27,0	1/1:4,15:20:20.59:305,21,0	1/1:6,19:25:20.56:304,21,0	1/1:1,5:7:13.23:110,13,0
chr10	25634118	.	GA	G	140.04	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.093;DP=510;FS=8.499;HRun=10;HaplotypeScore=79.9022;InbreedingCoeff=0.7746;MQ=70.59;MQ0=4;MQRankSum=-2.601;QD=15.56;ReadPosRankSum=-0.983;VQSLOD=3.2580;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:36.10:0,36,398	0/0:6,0:6:18.05:0,18,198	0/0:47,1:20:9.89:0,10,285	0/0:28,0:15:4.84:0,5,37	0/0:23,0:23:54.15:0,54,597	0/0:23,1:25:30.94:0,31,545	0/0:11,0:11:24.05:0,24,257	0/0:26,0:26:65.96:0,66,690	0/0:13,0:13:36.09:0,36,390	0/0:19,0:19:50.91:0,51,530	0/0:22,0:22:54.14:0,54,595	0/0:9,0:9:27.05:0,27,283	0/0:8,0:9:23.09:0,23,238	0/0:20,0:20:54.13:0,54,582	1/1:0,9:9:26.99:234,27,0	0/0:22,0:22:48.11:0,48,522	0/0:25,0:26:58.87:0,59,709	0/0:16,0:16:36.96:0,37,389	0/0:22,0:23:66:0,66,704	0/0:12,0:12:9.63:0,10,299	0/0:11,0:11:24.02:0,24,252	0/0:8,0:9:23.90:0,24,246	0/0:21,0:21:20.23:0,20,410	0/0:18,0:18:30.08:0,30,332	0/0:13,0:14:26.91:0,27,279	0/0:22,0:22:47.58:0,48,545	0/0:24,0:24:51.12:0,51,555	0/0:6,0:6:12.03:0,12,133
chr10	25638131	.	A	AC	27833.78	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-13.397;DP=769;FS=13.817;HRun=1;HaplotypeScore=67.6489;InbreedingCoeff=0.9985;MQ=88.59;MQ0=0;MQRankSum=-10.264;QD=41.24;ReadPosRankSum=4.543;VQSLOD=4.0151;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,51:51:99:2067,138,0	1/1:0,13:13:36.12:539,36,0	0/0:29,0:29:76.11:0,76,956	0/0:26,0:26:75.11:0,75,882	1/1:1,35:36:96.33:1439,96,0	1/1:1,39:40:99:1619,108,0	1/1:1,21:22:54.18:809,54,0	1/1:4,36:40:99:1572,108,0	1/1:1,18:19:54.18:809,54,0	1/1:4,21:26:72.10:1023,72,0	1/1:1,22:23:57.15:829,57,0	1/1:0,36:36:99:1619,108,0	1/1:0,26:26:69.23:1033,69,0	1/1:0,21:21:60.20:899,60,0	0/0:39,0:39:99:0,117,1505	1/1:0,27:27:81.27:1214,81,0	1/1:1,25:26:69.23:1034,69,0	1/1:0,16:16:45.15:674,45,0	1/1:0,24:24:72.24:1078,72,0	1/1:0,40:40:99:1700,114,0	1/1:0,28:28:81.27:1214,81,0	1/1:0,21:21:57.19:854,57,0	1/1:2,21:23:60.20:888,60,0	1/1:0,39:39:99:1708,114,0	1/1:1,14:15:39.13:585,39,0	1/1:0,27:27:81.25:1191,81,0	1/1:2,26:28:75.25:1124,75,0	1/1:0,8:8:21.07:315,21,0
chr10	25639133	.	TACACACACAC	T	3419.24	PASS	AB=0.745;AC=37;AF=0.740;AN=50;BaseQRankSum=3.621;DP=537;FS=8.214;HRun=0;HaplotypeScore=145.2703;InbreedingCoeff=0.4315;MQ=70.93;MQ0=7;MQRankSum=-2.198;QD=9.34;ReadPosRankSum=2.351;VQSLOD=2.2231;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:28:6.02:0,6,79	1/1:7,5:12:6.02:174,6,0	./.	./.	1/1:14,2:16:3.01:89,3,0	1/1:18,7:26:14.66:355,15,0	1/1:15,5:20:9.03:258,9,0	0/0:21,0:21:7.57:0,8,77	1/1:18,8:26:12.04:354,12,0	1/1:10,4:14:5.49:175,5,0	1/1:11,2:13:0.47:1,0,0	1/1:14,4:19:9.03:247,9,0	1/1:10,1:11:3.01:89,3,0	1/1:10,7:19:15.05:362,15,0	0/0:24,0:24:15.05:0,15,640	1/1:2,1:7:5.59:118,6,0	0/1:27,1:39:74.49:133,0,74	0/0:8,0:8:0.89:0,1,2	1/1:5,0:5:2.94:70,3,0	1/1:15,1:17:11.58:277,12,0	1/1:24,0:24:3.01:45,3,0	./.	1/1:7,6:13:3.37:89,3,0	1/1:19,12:31:2.77:88,3,0	1/1:16,10:27:15.05:414,15,0	1/1:22,2:24:1.88:81,2,0	0/0:7,0:7:5.41:0,5,26	0/0:7,0:6:2.22:0,2,7
chr10	25639169	.	C	CAT	82.60	PASS	AB=0.538;AC=1;AF=0.018;AN=56;BaseQRankSum=-1.918;DP=580;FS=5.773;HRun=0;HaplotypeScore=104.9518;InbreedingCoeff=-0.0063;MQ=54.83;MQ0=15;MQRankSum=-0.409;QD=2.95;ReadPosRankSum=1.852;VQSLOD=1.8609;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:40:80.51:0,81,629	0/0:12,0:12:20.91:0,21,164	0/0:19,0:8:14.18:0,14,168	0/0:20,0:13:27.05:0,27,275	0/0:15,0:15:32.90:0,33,262	0/0:27,0:27:47.46:0,47,355	0/0:19,0:19:35.77:0,36,282	0/0:18,0:18:52.99:0,53,418	0/0:28,0:28:53.45:0,53,404	0/0:16,0:16:44.42:0,44,375	0/0:15,0:15:32.85:0,33,263	0/0:21,0:21:41.76:0,42,319	0/0:17,0:15:29.84:0,30,230	0/0:20,0:20:41.65:0,42,305	0/1:4,24:28:19.68:157,0,20	0/0:16,0:16:38.86:0,39,307	0/0:42,0:40:62.61:0,63,449	0/0:10,0:10:23.80:0,24,175	0/0:12,0:11:29.80:0,30,238	0/0:23,0:22:50.79:0,51,398	0/0:32,0:31:62.80:0,63,509	0/0:14,0:14:20.97:0,21,172	0/0:14,0:14:20.84:0,21,163	0/0:32,0:32:41.84:0,42,337	0/0:30,0:29:53.64:0,54,419	0/0:21,0:21:53.90:0,54,456	0/0:13,0:13:33.30:0,33,236	0/0:4,0:3:5.88:0,6,36
chr10	25639328	.	T	TAC	1354.16	PASS	AB=0.923;AC=3;AF=0.054;AN=56;BaseQRankSum=-5.639;DP=659;FS=2.578;HRun=0;HaplotypeScore=75.8449;InbreedingCoeff=0.6474;MQ=79.86;MQ0=0;MQRankSum=-3.805;QD=27.64;ReadPosRankSum=0.447;VQSLOD=4.7071;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:72.25:0,72,1175	0/0:12,0:12:33.11:0,33,538	0/0:22,0:22:60.97:0,61,890	0/0:14,0:14:33:0,33,477	0/0:46,0:46:99:0,138,2251	0/0:34,0:34:99:0,102,1658	0/0:19,0:19:57.19:0,57,930	0/0:33,0:33:96.32:0,96,1545	0/0:16,0:16:48.16:0,48,779	0/0:20,0:20:60.20:0,60,979	0/0:23,0:23:66.23:0,66,1068	0/0:29,0:29:84.29:0,84,1367	0/0:26,0:26:75.26:0,75,1224	0/0:29,0:29:87.28:0,87,1385	1/1:2,23:25:69.24:1401,69,0	0/0:14,0:13:42.14:0,42,685	0/0:24,0:23:69.23:0,69,1101	0/0:17,0:17:51.17:0,51,832	0/0:18,0:18:54.18:0,54,859	0/0:31,0:31:93.32:0,93,1511	0/0:11,0:11:33.11:0,33,539	0/0:27,0:27:76.86:0,77,1270	0/0:21,0:21:63.22:0,63,1028	0/0:12,0:12:36.12:0,36,587	0/0:30,0:30:90.26:0,90,1434	0/0:31,0:31:93.32:0,93,1517	0/0:27,0:27:81.28:0,81,1322	0/1:22,2:23:58.91:59,0,859
chr10	25639812	.	CA	C	9972.50	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=2.179;DP=629;FS=0.000;HRun=9;HaplotypeScore=99.5168;InbreedingCoeff=0.9931;MQ=59.83;MQ0=7;MQRankSum=-5.646;QD=23.19;ReadPosRankSum=3.704;VQSLOD=4.8770;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:31:68.32:0,68,347	1/1:2,8:10:27:243,27,0	0/0:42,0:22:20.32:0,20,266	0/0:38,0:20:27.07:0,27,301	1/1:4,22:26:71.96:642,72,0	1/1:4,21:25:66.01:598,66,0	1/1:6,6:12:26.97:237,27,0	0/0:35,0:36:86.54:0,87,937	1/1:2,14:16:42.01:384,42,0	1/1:3,20:23:63.03:576,63,0	1/1:6,13:19:13.39:372,13,0	1/1:2,13:15:42.02:384,42,0	1/1:5,9:14:36.02:329,36,0	1/1:5,20:25:63.02:572,63,0	0/0:23,0:22:65.55:0,66,726	1/1:7,19:26:66.03:602,66,0	0/0:29,0:29:80.52:0,81,887	1/1:7,14:21:46.24:409,46,0	1/1:9,20:28:75.02:678,75,0	1/1:8,20:28:74.89:668,75,0	1/1:3,7:10:23.98:213,24,0	1/1:5,10:15:36:325,36,0	1/1:8,24:32:65.59:727,66,0	1/1:7,10:17:36.01:329,36,0	1/1:4,20:24:65.96:593,66,0	1/1:3,12:14:36.01:329,36,0	1/1:1,17:18:54:487,54,0	1/1:0,10:10:30.02:274,30,0
chr10	25639851	.	C	CA	12052.28	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-0.744;DP=559;FS=37.011;HRun=8;HaplotypeScore=86.2590;InbreedingCoeff=0.8887;MQ=62.82;MQ0=4;MQRankSum=-4.907;QD=25.97;ReadPosRankSum=2.147;VQSLOD=2.8229;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:51.03:0,51,466	1/1:2,9:11:24.96:279,25,0	0/0:20,0:14:0.14:0,0,88	0/0:28,0:17:23.79:0,24,206	1/1:2,23:25:63.18:718,63,0	1/1:1,22:23:63.19:727,63,0	1/1:2,17:19:44.97:499,45,0	0/0:27,0:27:54.01:0,54,487	1/1:4,13:17:39.12:450,39,0	1/1:3,21:24:60.18:692,60,0	1/1:2,18:20:51.11:574,51,0	1/1:3,9:12:21.06:242,21,0	1/1:0,12:12:36.11:415,36,0	1/1:3,18:21:51.11:573,51,0	1/1:3,0:21:42.61:216,43,0	1/1:5,22:27:51.15:588,51,0	1/1:0,23:23:63.19:727,63,0	1/1:2,8:10:21.06:242,21,0	1/1:7,20:26:60.18:693,60,0	1/1:2,26:28:75.18:848,75,0	1/1:5,10:15:30.09:346,30,0	1/1:3,11:14:5.63:319,6,0	1/1:5,24:29:42.87:735,43,0	1/1:2,10:12:21.06:242,21,0	1/1:7,18:25:57.13:643,57,0	1/1:4,17:20:42.11:474,42,0	1/1:1,17:18:48.14:554,48,0	1/1:3,6:9:24.04:257,24,0
chr10	25640032	.	AT	A	1223.86	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=10.160;DP=605;FS=9.247;HRun=9;HaplotypeScore=61.4838;InbreedingCoeff=0.9628;MQ=76.13;MQ0=0;MQRankSum=-3.795;QD=21.85;ReadPosRankSum=0.994;VQSLOD=4.2456;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,22:27:63.03:577,63,0	0/0:12,0:12:36.10:0,36,407	0/0:16,0:16:29.03:0,29,375	0/0:16,0:16:29.95:0,30,310	0/0:24,0:24:57.17:0,57,658	0/0:29,1:30:53.77:0,54,873	0/0:23,0:23:66.16:0,66,741	0/0:32,0:32:78.23:0,78,900	0/0:21,0:21:57.17:0,57,658	0/0:28,0:28:78.23:0,78,894	0/0:28,0:28:81.22:0,81,924	0/0:21,0:21:60.17:0,60,684	0/0:21,0:21:60.18:0,60,688	0/0:19,0:19:57.16:0,57,648	1/1:0,29:29:84.05:769,84,0	0/0:22,1:23:32.71:0,33,630	0/0:20,0:20:57.16:0,57,649	0/0:15,1:16:20.69:0,21,491	0/0:17,1:20:8.53:0,9,343	0/0:23,1:25:44.56:0,45,734	0/0:13,0:13:21.06:0,21,242	0/0:22,0:22:60.18:0,60,692	0/0:20,0:20:57.15:0,57,648	0/0:14,0:14:39.12:0,39,450	0/0:19,0:19:54.15:0,54,616	0/0:17,0:17:48.12:0,48,536	0/0:35,0:35:87.19:0,87,968	0/0:14,0:14:42.12:0,42,485
chr10	25642529	.	CTA	C	339.38	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=1.198;DP=604;FS=0.000;HRun=0;HaplotypeScore=144.6714;InbreedingCoeff=0.7465;MQ=71.85;MQ0=17;MQRankSum=1.400;QD=14.14;ReadPosRankSum=0.583;VQSLOD=3.5846;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:22:38.57:0,39,402	0/0:5,0:5:14.03:0,14,111	0/0:43,0:25:22.38:0,22,536	0/0:64,0:32:11.01:0,11,582	0/0:34,0:34:73.68:0,74,742	0/0:23,0:23:50.98:0,51,545	0/0:20,0:20:38.54:0,39,394	0/0:24,0:23:66.59:0,67,530	0/0:18,0:18:38.88:0,39,351	0/0:27,0:26:71.77:0,72,715	0/0:12,0:12:32.99:0,33,288	0/0:16,0:15:32.61:0,33,297	0/0:12,2:14:14.99:0,15,202	0/0:15,0:14:32.99:0,33,336	1/1:21,3:24:4.91:419,5,0	0/0:23,0:22:62.39:0,62,558	0/0:22,0:20:37.81:0,38,364	0/0:14,0:14:35.94:0,36,326	0/0:15,0:13:38.96:0,39,396	0/0:20,0:20:42.73:0,43,373	0/0:22,0:20:50.79:0,51,528	0/0:12,0:12:29.98:0,30,290	0/0:24,0:22:48.64:0,49,534	0/0:18,0:17:41.94:0,42,381	0/0:23,0:23:56.46:0,56,522	0/0:24,0:24:66.10:0,66,763	0/0:19,0:19:47.01:0,47,402	0/0:6,0:5:9.88:0,10,81
chr10	25642533	.	C	CTA	7025.98	PASS	AB=0.987;AC=40;AF=0.714;AN=56;BaseQRankSum=-2.484;DP=658;FS=7.950;HRun=0;HaplotypeScore=137.9705;InbreedingCoeff=0.5982;MQ=67.78;MQ0=28;MQRankSum=1.360;QD=16.19;ReadPosRankSum=6.155;VQSLOD=4.0419;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:22:35.16:0,35,219	1/1:7,0:6:14.73:117,15,0	0/0:52,0:23:18.24:0,18,394	0/0:76,0:31:42.90:0,43,570	0/1:35,2:35:19.47:460,0,19	1/1:21,2:23:33.76:371,34,0	1/1:23,0:22:16.40:304,16,0	0/0:22,0:21:32.56:0,33,375	1/1:17,0:17:22.74:256,23,0	0/1:31,0:30:24.46:471,0,24	1/1:7,4:11:30.01:366,30,0	1/1:20,0:18:29.36:282,29,0	1/1:17,0:16:24.84:182,25,0	0/1:15,0:14:27.95:198,0,28	0/0:26,0:26:63.89:0,64,595	1/1:23,2:24:61.39:577,61,0	0/0:25,0:22:37.05:0,37,263	1/1:14,1:15:32.84:253,33,0	0/1:16,0:12:21.43:181,0,21	1/1:22,1:22:35.18:377,35,0	1/1:18,2:18:38.83:381,39,0	1/1:18,1:19:16.87:191,17,0	1/1:26,0:24:45.84:432,46,0	1/1:18,0:17:39.52:301,40,0	1/1:22,0:22:19.57:395,20,0	1/1:20,2:22:62.39:603,62,0	1/1:18,2:20:1.43:292,1,0	1/1:7,0:4:6.14:37,6,0
chr10	25642557	.	CTA	C	5037.07	PASS	AB=1.000;AC=54;AF=0.964;AN=56;BaseQRankSum=-2.818;DP=831;FS=5.351;HRun=0;HaplotypeScore=118.3209;InbreedingCoeff=0.1329;MQ=42.84;MQ0=137;MQRankSum=2.799;QD=6.06;ReadPosRankSum=1.901;VQSLOD=4.0257;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:23:18.39:107,18,0	1/1:8,1:6:14.78:110,15,0	1/1:95,0:3:2.84:14,3,0	0/1:166,0:21:0.69:1,0,82	1/1:34,2:30:2.46:214,2,0	1/1:24,0:21:23.62:212,24,0	1/1:23,2:21:9.20:156,9,0	1/1:17,0:16:43.17:245,43,0	1/1:15,1:14:22.63:146,23,0	1/1:29,0:25:27.54:343,28,0	1/1:15,0:7:9.92:80,10,0	1/1:19,1:16:24.02:215,24,0	1/1:16,1:14:8.23:119,8,0	1/1:17,0:12:1.18:85,1,0	1/1:29,0:28:2.63:436,3,0	1/1:23,1:19:42.57:319,43,0	1/1:28,0:20:32.93:201,33,0	1/1:21,0:15:31.58:188,32,0	0/1:13,0:8:10.20:66,0,10	1/1:23,0:20:26.16:210,26,0	1/1:27,0:20:5.24:105,5,0	1/1:26,0:19:30.65:195,31,0	1/1:24,3:23:23.57:182,24,0	1/1:19,0:15:29.89:211,30,0	1/1:22,0:20:13.58:250,14,0	1/1:20,0:16:22.51:224,23,0	1/1:27,1:24:33.37:355,33,0	1/1:8,0:4:8.76:51,9,0
chr10	25642559	.	ATC	A	373.26	PASS	AB=1.000;AC=6;AF=0.107;AN=56;BaseQRankSum=-4.066;DP=828;FS=4.201;HRun=0;HaplotypeScore=133.7963;InbreedingCoeff=0.2434;MQ=41.68;MQ0=138;MQRankSum=-1.476;QD=4.06;ReadPosRankSum=-1.204;VQSLOD=2.6564;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:24:20.09:0,20,125	0/1:9,0:6:3:3,0,11	0/0:98,1:3:0:0,0,0	0/0:168,0:21:13.24:0,13,149	0/0:36,0:30:32.18:0,32,212	0/0:24,0:21:25.27:0,25,133	0/0:25,0:21:8.25:0,8,52	1/1:4,13:16:36.11:434,36,0	0/0:16,0:14:15.37:0,15,65	0/0:28,0:24:33.17:0,33,198	0/0:14,0:6:6.84:0,7,18	0/1:19,0:15:18.73:19,0,43	0/1:18,0:15:5.26:5,0,64	0/0:16,0:11:13.86:0,14,98	0/1:29,0:28:30.57:31,0,121	0/0:23,0:18:6.63:0,7,41	0/0:28,0:20:5.46:0,5,118	0/0:21,0:15:18.57:0,19,73	0/0:11,0:8:11.51:0,12,107	0/0:22,0:19:14.99:0,15,65	0/0:25,0:18:15.62:0,16,97	0/0:28,0:21:22.60:0,23,89	0/0:27,0:23:22.20:0,22,203	0/0:18,0:14:10.16:0,10,50	0/0:22,0:20:16.06:0,16,80	0/0:20,0:15:24.99:0,25,164	0/0:28,0:24:9.09:0,9,74	0/0:8,0:4:3.38:0,3,11
chr10	25642573	.	CT	C	4936.34	PASS	AB=0.698;AC=40;AF=0.714;AN=56;BaseQRankSum=-0.552;DP=835;FS=25.729;HRun=2;HaplotypeScore=103.0004;InbreedingCoeff=0.2345;MQ=44.14;MQ0=153;MQRankSum=4.464;QD=10.24;ReadPosRankSum=4.074;VQSLOD=1.4355;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:23,1:18:23.73:173,24,0	1/1:1,8:6:12.02:137,12,0	0/0:124,0:14:24.97:0,25,308	0/0:188,0:27:34.47:0,34,388	0/1:16,18:27:44.29:292,0,44	1/1:9,13:18:26.70:342,27,0	0/1:8,17:21:34.21:104,0,34	0/0:19,0:18:37.13:0,37,262	1/1:5,12:13:13.26:224,13,0	1/1:11,11:17:6.66:229,7,0	1/1:11,3:6:8.36:73,8,0	1/1:9,9:13:1.15:174,1,0	1/1:17,4:16:18.72:137,19,0	0/1:8,9:12:8.59:181,0,9	0/0:22,0:21:49.49:0,49,563	1/1:7,7:11:22.80:268,23,0	0/1:30,1:23:99:111,0,241	0/1:6,13:13:10.36:268,0,10	0/1:6,6:7:10.72:43,0,11	1/1:8,9:14:4.96:170,5,0	0/1:22,3:17:26.92:106,0,27	1/1:13,13:20:39.93:480,40,0	1/1:11,14:20:14.61:223,15,0	1/1:7,7:10:20.74:241,21,0	0/1:4,15:15:3.30:245,0,3	1/1:4,17:14:24.36:290,24,0	1/1:11,12:18:0.29:290,0,0	1/1:2,9:9:12.87:136,13,0
chr10	25642574	.	T	TC	4246.09	PASS	AB=0.849;AC=34;AF=0.607;AN=56;BaseQRankSum=-1.572;DP=826;FS=31.203;HRun=1;HaplotypeScore=111.2126;InbreedingCoeff=0.0147;MQ=46.79;MQ0=153;MQRankSum=6.290;QD=9.03;ReadPosRankSum=3.837;VQSLOD=0.8037;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,21:18:22.03:360,22,0	1/1:8,1:6:11.62:85,12,0	0/0:124,0:15:31.93:0,32,337	0/0:190,0:29:34.86:0,35,379	0/1:27,6:26:81.87:132,0,82	1/1:17,2:15:14.45:188,14,0	0/1:24,1:21:7.41:117,0,7	0/0:19,0:18:49.01:0,49,406	1/1:14,3:13:2.03:104,2,0	0/1:18,2:15:63.52:123,0,64	0/1:10,5:6:0.79:56,0,1	0/1:13,4:12:11.47:230,0,11	1/1:7,14:16:20.54:259,21,0	0/1:12,4:11:20.74:190,0,21	0/0:23,0:22:46.27:0,46,612	1/1:11,4:11:20.35:158,20,0	0/1:26,5:24:99:170,0,311	0/1:15,4:13:17.92:159,0,18	0/1:10,1:6:14.14:14,0,24	0/1:14,2:13:4.50:125,0,4	0/1:9,16:17:29.32:109,0,29	1/1:20,6:20:30.28:353,30,0	1/1:18,8:21:16.92:456,17,0	1/1:9,3:8:20.76:212,21,0	0/1:17,2:15:0.95:164,0,1	0/1:20,0:13:5.57:197,0,6	0/1:18,5:18:45.45:172,0,45	1/1:10,0:8:11.92:113,12,0
chr10	25643515	.	C	CA	756.77	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=-3.215;DP=561;FS=2.366;HRun=9;HaplotypeScore=57.4488;InbreedingCoeff=0.6722;MQ=72.98;MQ0=1;MQRankSum=0.040;QD=14.01;ReadPosRankSum=-0.627;VQSLOD=3.4060;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,28:32:58.01:851,58,0	0/0:10,0:10:23.99:0,24,208	0/0:26,0:19:6.22:0,6,189	0/1:22,0:17:3.58:4,0,64	0/0:19,0:19:47.97:0,48,412	0/0:22,0:22:59.97:0,60,517	0/0:10,0:10:29.99:0,30,260	0/0:34,0:34:74.94:0,75,645	0/0:17,0:17:44.97:0,45,387	0/0:17,0:18:47.03:0,47,397	0/0:23,0:24:58.99:0,59,497	0/0:19,0:19:44.97:0,45,391	0/0:16,0:16:47.98:0,48,413	0/0:15,0:15:38.97:0,39,335	0/0:13,0:13:32.99:0,33,286	0/0:17,0:17:47.98:0,48,414	0/0:27,0:27:68.88:0,69,578	0/0:17,0:16:44.98:0,45,390	0/0:22,0:21:50.90:0,51,433	0/0:30,0:31:70.97:0,71,598	0/0:13,0:13:23.99:0,24,208	0/0:13,0:13:32.99:0,33,286	0/0:22,0:22:62.96:0,63,540	0/0:18,0:18:44.99:0,45,390	0/0:23,0:23:56.95:0,57,487	0/0:25,0:25:71.98:0,72,625	0/0:25,0:25:65.95:0,66,565	0/0:11,0:11:23.96:0,24,208
chr10	25643903	.	GT	G	10722.64	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=2.654;DP=633;FS=4.272;HRun=11;HaplotypeScore=69.3409;InbreedingCoeff=0.9205;MQ=74.66;MQ0=1;MQRankSum=-4.094;QD=18.81;ReadPosRankSum=6.490;VQSLOD=5.3721;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:3,23:26:56.93:468,57,0	1/1:1,14:15:6.97:264,7,0	0/0:21,0:20:23.41:0,23,233	0/0:17,0:11:5.77:0,6,88	1/1:4,21:26:64.94:523,65,0	1/1:2,28:31:76.95:622,77,0	1/1:5,16:21:44.91:369,45,0	0/0:24,0:25:50.28:0,50,564	1/1:2,18:20:33.62:420,34,0	1/1:3,26:29:77.84:632,78,0	1/1:2,23:25:56.85:462,57,0	1/1:3,19:22:47.94:394,48,0	1/1:1,20:21:56.93:468,57,0	1/1:0,15:15:41.95:345,42,0	1/1:4,25:29:59.90:493,60,0	1/1:2,24:26:56.77:468,57,0	1/1:5,18:24:49.97:400,50,0	1/1:4,13:17:26.94:222,27,0	1/1:3,20:23:56.88:462,57,0	1/1:2,22:24:56.90:467,57,0	1/1:0,28:28:74.91:616,75,0	1/1:2,15:18:31.96:252,32,0	1/1:3,18:21:15.84:337,16,0	1/1:1,23:24:59.93:493,60,0	1/1:5,17:22:47.92:394,48,0	1/1:3,17:20:50.90:415,51,0	1/1:4,29:33:71.90:591,72,0	1/1:2,8:10:17.96:148,18,0
chr10	25645030	.	CAA	C	389.52	PASS	AB=0.923;AC=3;AF=0.056;AN=54;BaseQRankSum=-0.116;DP=503;FS=4.570;HRun=13;HaplotypeScore=85.6447;InbreedingCoeff=0.5561;MQ=76.07;MQ0=1;MQRankSum=2.167;QD=11.13;ReadPosRankSum=2.487;VQSLOD=2.6752;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,20:23:34.08:475,34,0	0/0:4,0:7:11.93:0,12,97	0/0:29,0:24:24.18:0,24,240	0/1:11,1:9:19.63:20,0,50	0/0:18,0:34:60.65:0,61,438	0/0:6,0:18:14.89:0,15,115	0/0:7,0:13:20.76:0,21,145	0/0:25,0:26:60.13:0,60,723	0/0:8,0:9:17.92:0,18,155	0/0:11,0:18:33.74:0,34,275	0/0:12,0:24:52.94:0,53,411	0/0:8,0:15:23.84:0,24,184	0/0:7,0:15:17.85:0,18,129	0/0:8,0:20:26.93:0,27,231	0/0:10,0:20:17.87:0,18,140	0/0:9,0:15:23.83:0,24,185	0/0:7,0:17:24:0,24,218	0/0:13,0:18:20.89:0,21,159	0/0:7,0:12:29.86:0,30,241	0/0:12,0:27:68.53:0,69,568	./.	0/0:7,0:18:41.76:0,42,340	0/0:7,0:21:20.68:0,21,186	0/0:1,0:3:5.96:0,6,48	0/0:3,0:10:17.92:0,18,146	0/0:15,0:30:74.77:0,75,644	0/0:13,0:33:40.48:0,40,303	0/0:2,0:9:15:0,15,136
chr10	25645333	.	G	GA	728.33	PASS	AB=0.890;AC=4;AF=0.071;AN=56;BaseQRankSum=-5.636;DP=614;FS=0.000;HRun=10;HaplotypeScore=74.2724;InbreedingCoeff=0.4159;MQ=77.05;MQ0=0;MQRankSum=-0.314;QD=12.56;ReadPosRankSum=0.313;VQSLOD=3.3760;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:42.57:0,43,491	0/1:6,1:7:11.01:11,0,127	0/0:18,0:19:9.30:0,9,131	0/0:21,0:23:4.01:0,4,99	0/0:30,2:32:24.90:0,25,408	0/0:27,0:27:68.90:0,69,566	0/0:18,0:18:50.93:0,51,416	0/0:33,0:33:80.86:0,81,663	0/0:28,0:28:74.74:0,75,605	0/0:28,0:30:75.97:0,76,602	0/1:16,2:19:23.01:23,0,232	0/0:26,1:27:33.92:0,34,485	0/0:16,0:16:38.95:0,39,320	0/0:20,0:20:59.93:0,60,493	1/1:4,28:32:56.56:807,57,0	0/0:16,0:16:41.84:0,42,333	0/0:1,0:26:46.85:0,47,135	0/0:14,0:14:32.95:0,33,271	0/0:18,0:18:49.01:0,49,380	0/0:21,1:23:29.60:0,30,432	0/0:18,0:19:40.97:0,41,323	0/0:20,1:21:18.86:0,19,354	0/0:25,0:25:22.92:0,23,341	0/0:12,0:14:34.02:0,34,255	0/0:9,0:9:26.94:0,27,215	0/0:26,0:26:65.29:0,65,526	0/0:26,0:26:56.90:0,57,468	0/0:17,0:17:38.94:0,39,320
chr10	25645581	.	CACAT	C	472.12	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=1.026;DP=668;FS=3.430;HRun=0;HaplotypeScore=135.8968;InbreedingCoeff=0.3366;MQ=71.07;MQ0=12;MQRankSum=-1.286;QD=4.58;ReadPosRankSum=-1.745;VQSLOD=2.5168;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:44:53.02:0,53,733	0/0:8,0:7:9.02:0,9,148	0/0:38,0:26:55.75:0,56,551	0/0:37,0:27:32.24:0,32,621	0/0:19,0:18:15.02:0,15,221	0/0:18,0:18:32.55:0,33,479	0/0:28,0:28:41.91:0,42,517	0/0:17,0:17:25.57:0,26,414	0/0:30,0:30:30.46:0,30,376	0/0:20,0:20:51.93:0,52,747	0/0:22,0:22:29.06:0,29,351	0/0:21,0:21:49.99:0,50,732	0/0:23,0:23:32.93:0,33,427	0/0:27,0:27:44.03:0,44,419	0/1:38,0:38:99:119,0,319	0/0:21,0:21:39.08:0,39,595	1/1:16,6:21:38.71:449,39,0	0/0:25,0:23:38.54:0,39,532	0/0:10,0:10:30.03:0,30,348	0/0:21,0:21:44.04:0,44,491	0/1:38,0:37:12.26:12,0,1063	0/0:18,0:18:29.99:0,30,313	0/0:24,0:24:35.92:0,36,368	0/0:43,0:42:61.85:0,62,920	0/0:16,0:16:27.02:0,27,472	0/0:20,0:20:57.26:0,57,641	0/0:13,0:13:29.38:0,29,400	0/1:5,0:5:12.53:13,0,178
chr10	25645585	.	T	TACAC	5726.97	PASS	AB=0.787;AC=42;AF=0.808;AN=52;BaseQRankSum=-5.583;DP=695;FS=0.843;HRun=0;HaplotypeScore=131.9738;InbreedingCoeff=-0.0493;MQ=63.40;MQ0=13;MQRankSum=1.487;QD=9.67;ReadPosRankSum=0.067;VQSLOD=4.0456;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:19,29:48:32.24:210,0,32	1/1:7,0:6:2.99:24,3,0	./.	./.	1/1:5,14:21:8.62:212,9,0	0/1:14,3:18:24.15:316,0,24	1/1:14,11:26:12.04:283,12,0	0/1:18,0:18:8.69:26,0,9	1/1:17,10:29:5.58:141,6,0	1/1:20,0:20:20.37:219,20,0	1/1:14,7:22:9.03:213,9,0	1/1:18,3:21:22.78:403,23,0	0/1:7,13:24:29.03:220,0,29	1/1:14,11:26:10.21:222,10,0	0/0:15,0:36:27.03:0,27,251	1/1:8,14:23:24.08:568,24,0	0/1:27,0:26:61.09:61,0,96	0/1:15,8:24:2.59:204,0,3	1/1:11,0:11:6.90:97,7,0	0/1:17,6:26:38.44:65,0,38	1/1:40,3:45:54.01:697,54,0	1/1:15,1:27:6.02:101,6,0	1/1:15,7:21:3.01:71,3,0	1/1:22,21:44:30.71:601,31,0	1/1:16,0:16:18.48:238,18,0	1/1:16,4:22:22.18:277,22,0	1/1:6,3:13:11.16:166,11,0	0/1:3,1:5:68.40:91,0,68
chr10	25645896	.	CACACACACACACACAGAGAG	C	9674.03	PASS	AB=0.951;AC=35;AF=0.625;AN=56;BaseQRankSum=10.039;DP=691;FS=1.782;HRun=0;HaplotypeScore=263.1798;InbreedingCoeff=0.1207;MQ=46.33;MQ0=27;MQRankSum=-1.111;QD=17.03;ReadPosRankSum=6.833;VQSLOD=3.1922;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:44,0:44:15.42:325,15,0	1/1:10,0:10:11.29:204,11,0	0/0:22,0:8:16.61:0,17,395	0/0:19,0:6:18.04:0,18,434	0/1:37,0:37:0.22:470,0,0	1/1:31,1:31:17.31:687,17,0	0/1:32,1:31:13.31:163,0,13	0/0:28,0:22:32.40:0,32,829	1/1:27,0:27:21.05:587,21,0	0/1:25,0:22:73.84:555,0,74	1/1:21,0:21:10.97:423,11,0	0/1:27,0:26:8.84:469,0,9	1/1:22,1:23:14.53:510,15,0	1/1:14,0:14:3.01:111,3,0	0/0:17,0:17:15.48:0,15,474	1/1:30,0:29:35.94:1304,36,0	0/0:36,0:34:20.09:0,20,996	0/1:22,0:19:99:470,0,177	0/1:18,0:18:99:632,0,260	0/1:21,2:22:25.88:568,0,26	1/1:36,0:32:2.80:48,3,0	0/1:6,19:25:10.04:364,0,10	1/1:20,0:20:8.72:157,9,0	1/1:28,0:27:9.03:271,9,0	1/1:6,9:15:6.02:269,6,0	0/1:29,0:29:82.31:576,0,82	0/1:21,0:20:16.28:484,0,16	0/1:7,0:7:27.19:27,0,119
chr10	25645898	.	CACACACACACACAGAGAG	C	13148.84	PASS	AB=0.908;AC=44;AF=0.786;AN=56;BaseQRankSum=6.512;DP=667;FS=8.159;HRun=0;HaplotypeScore=226.0501;InbreedingCoeff=0.4281;MQ=46.52;MQ0=27;MQRankSum=-0.516;QD=22.71;ReadPosRankSum=4.814;VQSLOD=2.5787;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:42,0:42:17.38:335,17,0	1/1:10,0:10:11.46:297,11,0	0/0:22,0:7:16.61:0,17,348	0/0:17,0:6:15.05:0,15,411	1/1:6,31:37:18.78:706,19,0	1/1:12,20:31:17.95:862,18,0	1/1:32,0:30:14.19:297,14,0	0/1:27,0:21:35.68:36,0,665	1/1:4,22:26:21.07:905,21,0	1/1:23,0:20:9.32:719,9,0	1/1:10,11:21:11.30:605,11,0	1/1:8,19:26:8.71:602,9,0	1/1:7,15:22:14.55:626,15,0	1/1:3,10:13:3.01:157,3,0	0/0:15,0:15:12.02:0,12,352	1/1:4,25:28:36.05:1850,36,0	0/0:34,0:33:19.42:0,19,850	0/1:20,2:19:97.80:714,0,98	0/1:12,8:19:99:856,0,209	1/1:7,15:21:15.04:658,15,0	1/1:34,0:30:2.54:72,3,0	1/1:23,0:23:9.03:345,9,0	1/1:5,14:19:8.64:284,9,0	1/1:6,22:27:9.03:407,9,0	1/1:12,1:13:6.02:281,6,0	1/1:13,16:28:22.71:730,23,0	1/1:7,13:19:14.81:732,15,0	0/1:7,0:7:72.78:73,0,115
chr10	25645910	.	CAGAGAG	C	6568.75	PASS	AB=0.748;AC=44;AF=0.786;AN=56;BaseQRankSum=6.391;DP=603;FS=10.719;HRun=0;HaplotypeScore=152.4006;InbreedingCoeff=0.4840;MQ=52.50;MQ0=22;MQRankSum=-4.838;QD=13.27;ReadPosRankSum=7.857;VQSLOD=2.4664;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:35:5.30:68,5,0	1/1:1,6:7:5.60:103,6,0	0/0:25,0:12:28.77:0,29,651	0/0:24,0:15:45.15:0,45,1201	1/1:35,0:35:17.81:310,18,0	1/1:28,0:27:17.87:323,18,0	1/1:9,13:20:11.77:177,12,0	0/0:28,0:25:57.19:0,57,1407	1/1:24,0:24:21.07:376,21,0	1/1:7,17:21:48.03:907,48,0	1/1:19,1:20:11.61:199,12,0	1/1:22,1:22:11.61:213,12,0	1/1:19,0:19:11.51:210,12,0	1/1:10,0:10:3.01:54,3,0	1/1:4,2:22:8.71:195,9,0	1/1:26,0:25:36.04:639,36,0	0/0:7,0:31:6:0,6,63	0/1:18,2:17:16.97:631,0,17	0/1:16,1:16:71.27:425,0,71	1/1:18,0:17:15.05:267,15,0	0/1:9,20:27:0:0,0,0	1/1:20,1:21:9.03:157,9,0	1/1:15,0:15:9.03:143,9,0	1/1:24,0:23:9.03:155,9,0	1/1:10,0:10:6.02:104,6,0	1/1:24,0:23:29.54:594,30,0	1/1:15,0:14:15.05:266,15,0	0/1:1,5:6:50.81:51,0,66
chr10	25646467	.	C	CA	24262.90	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-9.562;DP=669;FS=3.043;HRun=2;HaplotypeScore=57.0157;InbreedingCoeff=0.9992;MQ=80.19;MQ0=0;MQRankSum=-7.353;QD=40.30;ReadPosRankSum=8.020;VQSLOD=3.8283;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,23:23:69.23:1034,69,0	1/1:0,12:12:27.09:405,27,0	0/0:22,0:22:60.18:0,60,758	0/0:16,0:16:43.91:0,44,510	1/1:1,33:34:90.30:1337,90,0	1/1:0,30:30:81.27:1214,81,0	1/1:1,25:26:69.23:1034,69,0	0/0:29,0:29:78.23:0,78,987	1/1:0,29:29:81.27:1214,81,0	1/1:1,27:28:81.26:1193,81,0	1/1:1,21:21:51.17:764,51,0	1/1:1,24:25:57.19:854,57,0	1/1:0,19:19:57.19:854,57,0	1/1:1,19:20:51.17:765,51,0	1/1:2,30:32:84.28:1259,84,0	1/1:0,21:21:60.20:899,60,0	1/1:3,33:36:87.29:1304,87,0	1/1:1,10:11:27.09:405,27,0	1/1:1,25:26:75.24:1100,75,0	1/1:0,26:26:75.25:1124,75,0	1/1:0,16:16:45.15:675,45,0	1/1:2,25:27:78.22:1144,78,0	1/1:1,15:16:45.15:674,45,0	1/1:0,22:22:60.20:899,60,0	1/1:1,24:25:60.16:874,60,0	1/1:0,30:30:87.27:1264,87,0	1/1:2,32:33:96.32:1433,96,0	1/1:0,12:12:36.12:540,36,0
chr10	25647583	.	C	CAA	4954.64	PASS	AB=0.879;AC=47;AF=0.839;AN=56;BaseQRankSum=0.813;DP=600;FS=1.588;HRun=18;HaplotypeScore=174.3616;InbreedingCoeff=0.7264;MQ=62.40;MQ0=2;MQRankSum=-1.160;QD=9.97;ReadPosRankSum=-5.373;VQSLOD=0.3429;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:28:26.91:0,27,121	1/1:12,0:13:22.39:168,22,0	0/0:33,0:18:5.27:0,5,45	0/0:24,0:14:9.40:0,9,62	1/1:32,2:34:53.99:367,54,0	1/1:22,0:22:49.15:361,49,0	1/1:17,0:16:18.40:148,18,0	0/1:23,0:29:32.08:32,0,55	1/1:12,0:12:22.37:161,22,0	1/1:21,1:21:29.61:240,30,0	1/1:28,0:27:51.88:380,52,0	1/1:20,0:19:22.16:143,22,0	1/1:13,0:13:26.75:178,27,0	1/1:18,0:18:27.37:199,27,0	0/0:6,0:17:16.32:0,16,73	1/1:27,0:27:47.11:353,47,0	1/1:17,15:32:14.83:122,15,0	1/1:7,0:7:12.25:89,12,0	1/1:18,0:18:17.75:153,18,0	1/1:34,0:35:52.89:339,53,0	1/1:5,0:5:2.50:9,2,0	1/1:18,0:18:38.55:306,39,0	1/1:16,0:16:9.48:86,9,0	1/1:16,0:15:17.89:100,18,0	1/1:27,0:28:55.16:435,55,0	1/1:26,0:26:36.99:266,37,0	1/1:34,0:34:44.42:286,44,0	1/1:7,0:7:5.22:32,5,0
chr10	25647598	.	A	AG	2065.31	PASS	AB=0.910;AC=21;AF=0.375;AN=56;BaseQRankSum=-2.952;DP=617;FS=204.806;HRun=0;HaplotypeScore=93.6910;InbreedingCoeff=-0.5770;MQ=59.49;MQ0=2;MQRankSum=-0.858;QD=4.74;ReadPosRankSum=9.437;VQSLOD=-0.2530;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:86.66:0,87,610	0/1:10,0:12:35.71:36,0,44	0/0:36,0:16:34.53:0,35,307	0/0:23,0:14:16.41:0,16,190	0/1:28,1:29:99:112,0,116	0/1:20,3:23:80.76:81,0,136	0/1:13,0:12:9.53:88,0,10	0/0:35,0:35:92.34:0,92,788	0/1:12,1:13:40.85:102,0,41	0/1:24,1:24:99:154,0,109	0/1:27,2:28:91.55:228,0,92	0/1:19,0:19:58.89:59,0,68	0/1:14,0:14:20.06:20,0,92	0/1:18,0:18:57.44:99,0,57	0/0:17,0:17:32.17:0,32,222	0/1:25,1:27:99:167,0,108	0/0:31,0:31:30.16:0,30,215	0/1:4,8:12:1.11:1,0,61	0/1:10,7:17:99:137,0,126	0/1:30,0:30:99:130,0,166	0/0:1,0:1:2.97:0,3,20	0/1:24,0:24:84.25:114,0,84	0/1:3,0:21:34.79:35,0,36	0/1:16,1:16:31.17:80,0,31	0/1:32,1:33:99:215,0,115	0/1:21,1:22:99:187,0,113	0/1:31,1:32:99:172,0,148	0/1:5,0:5:6.94:7,0,55
chr10	25647687	.	GGTATCT	G	22803.19	PASS	AC=42;AF=0.778;AN=54;BaseQRankSum=14.545;DP=559;FS=8.787;HRun=0;HaplotypeScore=135.2485;InbreedingCoeff=0.9749;MQ=77.88;MQ0=0;MQRankSum=-16.154;QD=57.44;ReadPosRankSum=2.999;VQSLOD=4.5048;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,111,3965	1/1:0,9:9:27.09:648,27,0	0/0:23,0:23:69.10:0,69,2140	0/0:16,0:16:48.16:0,48,1591	1/1:2,23:25:72.25:1712,72,0	1/1:0,18:18:39.13:937,39,0	1/1:2,9:11:21.07:504,21,0	0/0:32,0:32:90.30:0,90,3036	1/1:1,15:16:42.14:1008,42,0	1/1:4,22:26:63.22:1514,63,0	1/1:3,26:29:72.16:1594,72,0	1/1:2,16:18:48.16:1153,48,0	1/1:3,14:17:45.15:1077,45,0	1/1:0,10:10:21.07:504,21,0	0/0:20,0:20:60.21:0,60,2116	1/1:1,22:23:60.21:1441,60,0	0/0:26,0:26:72.25:0,72,2516	./.	1/1:2,18:20:51.16:1156,51,0	1/1:1,25:26:75.26:1802,75,0	1/1:4,6:10:6.02:144,6,0	1/1:3,20:23:54.04:1124,54,0	1/1:0,24:24:66.23:1585,66,0	1/1:1,13:14:18.06:431,18,0	1/1:1,25:26:63.22:1513,63,0	1/1:3,11:14:33.11:793,33,0	1/1:2,27:29:66.23:1586,66,0	1/1:0,9:9:24.08:577,24,0
chr10	25647803	.	T	TTCCC	824.98	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=6.321;DP=565;FS=3.356;HRun=0;HaplotypeScore=130.6231;InbreedingCoeff=0.6777;MQ=89.43;MQ0=0;MQRankSum=-5.255;QD=35.87;ReadPosRankSum=1.323;VQSLOD=3.8684;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,102,1685	0/0:10,0:10:30.10:0,30,629	0/0:22,0:22:66.18:0,66,1287	0/0:25,0:25:22.64:0,23,1214	0/0:12,0:12:36.04:0,36,560	0/0:16,0:16:39.12:0,39,738	0/0:18,0:18:51.17:0,51,1003	0/0:38,0:38:99:0,114,2334	0/0:22,0:22:66.23:0,66,1368	0/0:16,0:16:42.05:0,42,717	0/0:18,0:18:48.04:0,48,787	0/0:25,0:25:72.25:0,72,1509	0/0:14,0:14:39.13:0,39,800	0/0:28,0:28:81.19:0,81,1597	0/0:21,0:21:63.22:0,63,1321	0/0:29,0:29:81.28:0,81,1685	1/1:1,14:14:45.14:918,45,0	0/1:8,0:8:8.38:8,0,390	0/0:15,0:15:42.11:0,42,816	0/0:16,0:16:45.07:0,45,712	0/0:20,0:20:51.13:0,51,937	0/0:15,0:15:42.07:0,42,690	0/0:18,0:18:48.12:0,48,892	0/0:26,0:26:75.26:0,75,1556	0/0:17,0:17:45.10:0,45,791	0/0:19,0:19:51.09:0,51,846	0/0:33,0:33:96.31:0,96,1961	0/0:12,0:12:36.11:0,36,673
chr10	25647804	.	A	AATG	772.64	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.692;DP=573;FS=3.368;HRun=0;HaplotypeScore=121.3809;InbreedingCoeff=0.9939;MQ=88.95;MQ0=0;MQRankSum=-6.729;QD=42.92;ReadPosRankSum=1.513;VQSLOD=5.1712;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,111,1606	0/0:10,0:10:30.10:0,30,559	0/0:22,0:22:66.23:0,66,1199	0/0:25,0:25:69.10:0,69,1205	0/0:12,0:12:33.06:0,33,491	0/0:19,0:19:42.08:0,42,681	0/0:18,0:18:54.13:0,54,921	0/0:37,0:37:99:0,111,2046	0/0:22,0:22:66.23:0,66,1219	0/0:18,0:18:48.04:0,48,702	0/0:18,0:18:48.12:0,48,769	0/0:26,0:26:72.25:0,72,1340	0/0:14,0:14:39.11:0,39,692	0/0:28,0:28:75.26:0,75,1397	0/0:21,0:21:63.22:0,63,1174	0/0:31,0:31:81.28:0,81,1501	1/1:4,14:17:51.17:868,51,0	0/0:8,0:8:20.04:0,20,387	0/0:15,0:15:45.12:0,45,775	0/0:16,0:16:45.09:0,45,678	0/0:19,0:19:54.13:0,54,875	0/0:15,0:15:45.09:0,45,678	0/0:19,0:19:51.12:0,51,816	0/0:26,0:26:75.26:0,75,1379	0/0:17,0:17:45.11:0,45,718	0/0:18,0:18:51.09:0,51,795	0/0:32,0:32:93.32:0,93,1724	0/0:12,0:12:36.11:0,36,622
chr10	25647931	.	CA	C	840.02	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.537;DP=673;FS=0.000;HRun=4;HaplotypeScore=71.4075;InbreedingCoeff=0.9703;MQ=72.14;MQ0=0;MQRankSum=-0.982;QD=28.00;ReadPosRankSum=1.123;VQSLOD=3.0290;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:60.20:0,60,840	0/0:17,0:17:51.14:0,51,693	0/0:33,0:30:84.22:0,84,1088	0/0:21,0:21:56.98:0,57,740	0/0:29,0:29:75.20:0,75,1011	0/0:26,0:26:75.14:0,75,960	0/0:27,0:27:78.25:0,78,1074	0/0:33,0:33:93.30:0,93,1285	0/0:24,0:24:69.23:0,69,962	0/0:31,0:31:93.31:0,93,1288	0/0:22,0:22:57.06:0,57,731	0/0:28,0:28:78.25:0,78,1076	0/0:21,0:21:60.19:0,60,820	0/0:32,0:32:93.31:0,93,1300	0/0:30,0:30:84.28:0,84,1176	0/0:23,0:23:69.16:0,69,941	1/1:0,30:30:78.24:935,78,0	0/0:21,0:21:60.20:0,60,840	0/0:19,0:19:51.17:0,51,702	0/0:27,0:27:81.26:0,81,1108	0/0:17,0:17:48.15:0,48,655	0/0:28,0:28:84.19:0,84,1115	0/0:15,0:15:45.08:0,45,564	0/0:25,0:25:72.22:0,72,976	0/0:18,0:18:51.11:0,51,672	0/0:21,0:21:63.20:0,63,866	0/0:26,0:26:78.17:0,78,1036	0/0:7,0:7:12.04:0,12,168
chr10	25648728	.	ATAGAC	A	913.61	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.570;DP=544;FS=5.350;HRun=0;HaplotypeScore=128.0290;InbreedingCoeff=0.8637;MQ=75.70;MQ0=0;MQRankSum=-7.311;QD=36.54;ReadPosRankSum=2.154;VQSLOD=3.3612;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:29.97:0,30,783	0/0:10,0:9:27.09:0,27,811	0/0:13,0:11:27.56:0,28,756	0/0:16,0:16:10.05:0,10,1023	0/0:26,0:26:78.27:0,78,2384	0/0:22,0:22:66.23:0,66,1989	0/0:17,0:17:48.16:0,48,1387	0/0:35,0:35:99:0,102,2902	0/0:10,0:10:30.10:0,30,914	0/0:27,0:27:81.28:0,81,2431	0/0:26,0:26:78.27:0,78,2352	0/0:24,0:24:69.24:0,69,2102	0/0:19,0:19:57.18:0,57,1622	0/0:21,0:22:60.21:0,60,1814	1/1:21,4:25:66.21:1008,66,0	0/0:20,0:20:60.21:0,60,1798	0/0:14,0:14:39.13:0,39,1090	0/0:10,0:10:30.10:0,30,901	0/0:15,0:15:39.60:0,40,1178	0/0:29,0:29:84.29:0,84,2472	0/0:20,0:20:60.21:0,60,1830	0/0:18,0:18:51.18:0,51,1518	0/0:22,0:22:63.22:0,63,1889	0/0:8,0:8:24.08:0,24,730	0/0:24,0:24:66.23:0,66,1907	0/0:22,0:22:66.23:0,66,1996	0/0:34,0:34:99:0,102,2938	0/0:2,0:2:6.02:0,6,186
chr10	25648729	.	TAG	T	818.31	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.337;DP=548;FS=5.358;HRun=0;HaplotypeScore=94.2560;InbreedingCoeff=0.7906;MQ=74.85;MQ0=0;MQRankSum=-6.878;QD=32.73;ReadPosRankSum=1.874;VQSLOD=5.9792;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:30.10:0,30,569	0/0:10,0:9:27.09:0,27,521	0/0:13,0:10:27.55:0,28,485	0/0:16,0:16:3.89:0,4,604	0/0:27,0:27:81.26:0,81,1519	0/0:22,0:22:66.23:0,66,1264	0/0:17,0:17:48.16:0,48,914	0/0:36,0:36:99:0,105,1929	0/0:11,0:11:33.10:0,33,604	0/0:27,0:27:81.28:0,81,1536	0/0:26,0:26:78.27:0,78,1487	0/0:23,0:23:69.24:0,69,1318	0/0:19,0:19:54.18:0,54,1025	0/0:22,0:22:60.21:0,60,1156	1/1:4,21:25:66.22:913,66,0	0/0:21,0:21:63.20:0,63,1154	0/0:14,0:14:42.12:0,42,755	0/0:10,0:10:30.10:0,30,579	0/0:16,0:16:42.13:0,42,761	0/0:28,0:28:84.29:0,84,1585	0/0:20,0:20:60.21:0,60,1154	0/0:18,0:18:51.17:0,51,975	0/0:22,0:22:63.22:0,63,1198	0/0:8,0:8:24.08:0,24,463	0/0:24,0:24:69.19:0,69,1191	0/0:22,0:22:66.23:0,66,1263	0/0:35,0:35:99:0,102,1862	0/0:2,0:2:6.02:0,6,116
chr10	25648733	.	CTTT	C	665.17	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.553;DP=554;FS=10.240;HRun=10;HaplotypeScore=106.8458;InbreedingCoeff=0.8610;MQ=74.72;MQ0=0;MQRankSum=-6.699;QD=26.61;ReadPosRankSum=1.328;VQSLOD=1.5555;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:19:36.57:0,37,519	0/0:10,0:9:21.06:0,21,400	0/0:13,0:10:10.11:0,10,347	0/0:16,0:16:33.78:0,34,591	0/0:27,0:27:78.27:0,78,1588	0/0:25,0:25:66.22:0,66,1333	0/0:14,0:15:36.10:0,36,708	0/0:31,0:32:78.23:0,78,1469	0/0:10,0:10:27.09:0,27,560	0/0:27,0:27:75.25:0,75,1480	0/0:26,0:26:72.21:0,72,1352	0/0:23,0:23:69.23:0,69,1392	0/0:19,0:19:49.40:0,49,963	0/0:23,0:23:60.16:0,60,1168	1/1:6,19:25:66.07:760,66,0	0/0:19,0:20:51.17:0,51,1009	0/0:13,0:15:36.08:0,36,645	0/0:10,0:10:24.08:0,24,475	0/0:17,0:17:45.15:0,45,934	0/0:25,0:28:78.22:0,78,1466	0/0:20,0:20:57.17:0,57,1142	0/0:18,0:18:42.13:0,42,834	0/0:24,0:24:66.17:0,66,1225	0/0:9,0:9:24.08:0,24,498	0/0:24,0:24:66.20:0,66,1273	0/0:24,0:24:69.21:0,69,1356	0/0:33,0:33:87.25:0,87,1650	0/0:2,0:2:6.02:0,6,124
chr10	25649549	.	TAG	T	122.10	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.588;DP=678;FS=1.326;HRun=0;HaplotypeScore=134.2838;InbreedingCoeff=0.8119;MQ=63.32;MQ0=6;MQRankSum=-1.475;QD=4.07;ReadPosRankSum=-2.291;VQSLOD=2.3493;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:40:54.71:0,55,817	0/0:8,0:8:21.07:0,21,347	0/0:10,0:7:18.05:0,18,252	0/0:10,0:8:19.31:0,19,268	0/0:34,0:34:58.17:0,58,780	0/0:28,0:28:50.98:0,51,698	0/0:19,0:19:38.88:0,39,590	0/0:40,0:40:99:0,108,1485	0/0:17,0:17:28.51:0,29,411	0/0:28,0:28:58.31:0,58,779	0/0:25,0:24:44.49:0,44,639	0/0:19,0:19:42.14:0,42,687	0/0:27,0:27:53.53:0,54,768	0/0:21,0:21:50.49:0,50,690	1/1:6,24:21:14.69:210,15,0	0/0:25,0:25:47.01:0,47,643	0/0:22,0:22:2.84:0,3,290	0/0:16,0:16:22.47:0,22,314	0/0:15,0:15:31.99:0,32,456	0/0:41,0:41:79.01:0,79,1117	0/0:22,0:22:36.39:0,36,482	0/0:24,0:24:34.98:0,35,501	0/0:29,0:29:33.90:0,34,572	0/0:12,0:12:25.33:0,25,366	0/0:47,0:47:88.30:0,88,1174	0/0:23,0:23:47.50:0,48,666	0/0:31,0:31:60.96:0,61,867	0/0:14,0:13:24.55:0,25,359
chr10	25649551	.	GAGAT	G	5616.40	PASS	AB=0.794;AC=44;AF=0.880;AN=50;BaseQRankSum=3.255;DP=675;FS=5.896;HRun=0;HaplotypeScore=138.4109;InbreedingCoeff=0.3850;MQ=63.30;MQ0=6;MQRankSum=1.736;QD=9.70;ReadPosRankSum=-0.843;VQSLOD=3.6196;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:28,13:40:24:361,24,0	0/1:7,0:8:15.92:16,0,195	./.	./.	1/1:19,14:34:33.11:497,33,0	1/1:16,12:28:18.06:271,18,0	0/0:20,0:19:3:0,3,27	./.	1/1:9,6:16:12.04:178,12,0	1/1:18,10:28:30.08:412,30,0	1/1:16,8:23:14.95:226,15,0	0/0:18,0:18:23.97:0,24,360	1/1:18,10:28:15.05:226,15,0	1/1:17,4:21:15.05:226,15,0	1/1:27,0:20:2.98:25,3,0	1/1:15,10:25:12.04:181,12,0	1/1:22,0:22:11.55:85,12,0	1/1:9,7:16:18.03:247,18,0	1/1:10,5:15:12.04:181,12,0	1/1:24,17:41:24.08:361,24,0	1/1:12,10:23:21.07:316,21,0	1/1:12,12:24:12.04:181,12,0	0/1:16,12:28:31.79:208,0,32	1/1:14,0:14:3.01:43,3,0	1/1:27,21:48:45.15:677,45,0	1/1:15,7:22:21.05:292,21,0	1/1:21,9:30:24.08:361,24,0	1/1:9,5:13:3.01:45,3,0
chr10	25649603	.	TAGATAGATAGA	T	31.48	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=2.420;DP=652;FS=0.000;HRun=0;HaplotypeScore=237.6828;InbreedingCoeff=0.4732;MQ=58.29;MQ0=9;MQRankSum=-2.154;QD=0.79;ReadPosRankSum=1.921;VQSLOD=2.4948;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:75.42:0,75,1363	0/0:11,0:11:30.10:0,30,900	0/0:13,0:10:30.10:0,30,418	0/0:9,0:7:18.05:0,18,237	0/0:34,0:34:87.16:0,87,1667	0/0:18,0:18:33.11:0,33,694	0/0:17,0:16:29.13:0,29,498	0/0:27,0:25:75.24:0,75,1026	0/0:21,0:21:54.18:0,54,1053	0/0:34,0:33:99:0,99,1931	0/0:22,0:21:41.99:0,42,781	0/0:21,0:21:57.19:0,57,1469	0/0:25,0:25:57.15:0,57,1033	0/0:24,0:24:69.19:0,69,1229	1/1:12,5:21:3.01:103,3,0	0/0:22,0:22:48.16:0,48,826	0/1:19,0:19:18.67:19,0,336	0/0:24,0:24:69.23:0,69,1459	0/0:16,0:12:33.11:0,33,616	0/0:33,0:33:75.25:0,75,1408	0/0:15,0:15:36.11:0,36,840	0/0:24,0:24:45.15:0,45,794	0/0:28,0:28:60.07:0,60,1139	0/0:13,0:13:27.09:0,27,387	0/0:41,0:41:99:0,102,2068	0/0:25,0:25:75.24:0,75,1391	0/0:37,0:37:99:0,102,1886	0/0:21,0:21:41.49:0,41,878
chr10	25649828	.	G	GA	629.91	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-5.832;DP=705;FS=5.517;HRun=7;HaplotypeScore=69.5056;InbreedingCoeff=0.9967;MQ=88.17;MQ0=0;MQRankSum=0.078;QD=23.33;ReadPosRankSum=0.680;VQSLOD=3.7260;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,120,1153	0/0:9,0:9:24.04:0,24,232	0/0:32,0:31:55.77:0,56,611	0/0:21,0:21:26.94:0,27,316	0/0:20,0:20:54.05:0,54,510	0/0:26,0:26:69.10:0,69,666	0/0:31,0:31:84.13:0,84,810	0/0:25,0:25:57.08:0,57,550	0/0:33,0:33:96.15:0,96,927	0/0:25,0:25:66.10:0,66,637	0/0:31,0:31:75.11:0,75,724	0/0:24,0:24:69.08:0,69,655	0/0:20,0:20:57.09:0,57,550	0/0:21,0:21:57.09:0,57,550	0/0:22,0:22:60.10:0,60,579	0/0:24,0:24:63.09:0,63,603	1/1:4,23:27:60.18:725,60,0	0/0:11,0:11:33.04:0,33,315	0/0:22,0:22:60.07:0,60,569	0/0:32,0:32:75.11:0,75,724	0/0:21,0:21:63.10:0,63,608	0/0:23,0:23:60.09:0,60,579	0/0:24,0:24:57.09:0,57,550	0/0:32,0:32:93.10:0,93,889	0/0:35,0:35:87.13:0,87,839	0/0:28,0:28:81.13:0,81,782	0/0:24,0:24:63.10:0,63,608	0/0:20,0:20:51.05:0,51,485
chr10	25650339	.	C	CT	629.99	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-5.014;DP=605;FS=0.000;HRun=7;HaplotypeScore=100.7515;InbreedingCoeff=0.9932;MQ=73.46;MQ0=0;MQRankSum=-0.281;QD=30.00;ReadPosRankSum=0.770;VQSLOD=3.0113;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:96.13:0,96,919	0/0:12,0:12:33.02:0,33,311	0/0:14,0:13:29.64:0,30,267	0/0:14,0:14:27.31:0,27,236	0/0:34,0:34:90.14:0,90,869	0/0:40,0:40:99:0,111,1047	0/0:23,0:23:60.08:0,60,575	0/0:33,0:33:87.05:0,87,817	0/0:22,0:22:57.09:0,57,550	0/0:18,0:18:45.06:0,45,434	0/0:21,0:21:54.08:0,54,521	0/0:20,0:20:54.04:0,54,506	0/0:18,0:18:48.07:0,48,463	0/0:22,0:22:63.08:0,63,601	1/1:0,21:21:60.18:725,60,0	0/0:18,0:18:48.05:0,48,452	0/0:23,0:23:66.09:0,66,631	0/0:13,0:13:33.05:0,33,318	0/0:15,0:15:39.05:0,39,372	0/0:31,0:31:84.12:0,84,806	0/0:12,0:12:30.01:0,30,277	0/0:16,0:16:48.08:0,48,463	0/0:19,0:19:57.08:0,57,544	0/0:14,0:14:39.04:0,39,370	0/0:19,0:19:54.04:0,54,508	0/0:24,0:24:63.08:0,63,603	0/0:45,0:45:99:0,126,1216	0/0:8,0:8:21:0,21,193
chr10	25650515	.	G	GT	839.68	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-6.379;DP=658;FS=4.864;HRun=8;HaplotypeScore=60.5604;InbreedingCoeff=0.9949;MQ=79.54;MQ0=0;MQRankSum=-0.602;QD=27.09;ReadPosRankSum=0.822;VQSLOD=4.4495;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:51:0,51,467	0/0:9,0:9:24.01:0,24,220	0/0:20,0:20:47.93:0,48,421	0/0:13,0:13:29.99:0,30,268	0/0:35,0:35:93.02:0,93,845	0/0:40,0:41:99:0,113,1021	0/0:22,0:23:62.05:0,62,550	0/0:33,0:33:84.03:0,84,766	0/0:20,0:20:57.01:0,57,516	0/0:22,0:22:56.99:0,57,512	0/0:28,0:28:75.01:0,75,677	0/0:28,0:28:78.03:0,78,714	0/0:16,0:16:48.01:0,48,435	0/0:24,0:24:63.03:0,63,577	1/1:4,27:31:81.24:935,81,0	0/0:22,0:22:66.04:0,66,604	0/0:27,0:26:81.04:0,81,741	0/0:11,0:11:23.96:0,24,211	0/0:20,0:20:57.01:0,57,516	0/0:25,0:25:72.04:0,72,659	0/0:11,0:11:33.01:0,33,298	0/0:21,0:21:57.03:0,57,521	0/0:31,0:31:84.04:0,84,768	0/0:31,0:31:87.03:0,87,790	0/0:15,0:15:41.99:0,42,377	0/0:27,0:27:78.04:0,78,714	0/0:38,0:38:99:0,111,1016	0/0:12,0:12:35.99:0,36,322
chr10	25650691	.	T	TA	1500.78	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-9.369;DP=651;FS=2.199;HRun=0;HaplotypeScore=59.3700;InbreedingCoeff=0.9993;MQ=84.71;MQ0=0;MQRankSum=-3.537;QD=40.56;ReadPosRankSum=1.423;VQSLOD=4.2631;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:66.22:0,66,921	0/0:12,0:12:33.11:0,33,461	0/0:22,0:22:36:0,36,579	0/0:18,0:18:48.14:0,48,652	0/0:16,0:16:48.13:0,48,623	0/0:29,0:29:84.26:0,84,1129	0/0:22,0:22:66.20:0,66,905	0/0:34,0:34:99:0,99,1337	0/0:23,0:23:69.22:0,69,948	0/0:20,0:20:60.15:0,60,804	0/0:29,0:29:87.29:0,87,1216	0/0:28,0:28:84.27:0,84,1157	0/0:26,0:26:78.23:0,78,1054	0/0:24,0:24:72.21:0,72,958	1/1:1,36:37:99:1596,102,0	0/0:17,0:17:51.16:0,51,684	0/0:30,0:30:90.28:0,90,1225	0/0:17,0:17:51.13:0,51,691	0/0:20,0:20:57.16:0,57,748	0/0:28,0:28:84.24:0,84,1109	0/0:22,0:22:63.21:0,63,880	0/0:17,0:17:48.15:0,48,656	0/0:19,0:19:57.17:0,57,766	0/0:29,0:29:84.27:0,84,1157	0/0:14,0:14:42.13:0,42,570	0/0:28,0:28:84.28:0,84,1160	0/0:36,0:35:99:0,105,1394	0/0:11,0:11:33.11:0,33,461
chr10	25650814	.	T	TG	735.79	PASS	AB=0.941;AC=3;AF=0.054;AN=56;BaseQRankSum=-6.453;DP=671;FS=3.835;HRun=5;HaplotypeScore=70.3744;InbreedingCoeff=0.6737;MQ=77.13;MQ0=0;MQRankSum=-3.068;QD=17.52;ReadPosRankSum=0.029;VQSLOD=3.2937;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,147,1561	0/0:13,0:13:33.08:0,33,355	0/0:31,0:31:81.14:0,81,842	0/0:21,0:21:32.99:0,33,498	0/0:33,0:33:90.22:0,90,967	0/0:15,0:15:45.11:0,45,483	0/0:24,0:24:69.15:0,69,733	0/0:26,0:25:54.09:0,54,562	0/0:21,0:21:57.12:0,57,604	0/0:23,0:23:63.16:0,63,677	0/0:24,0:24:69.12:0,69,721	0/0:20,0:20:60.14:0,60,636	0/0:26,0:26:63.15:0,63,676	0/0:19,0:19:54.14:0,54,580	0/0:28,0:28:78.15:0,78,820	0/0:32,0:32:84.19:0,84,894	1/1:1,25:26:63.20:829,63,0	0/1:15,1:16:8.02:8,0,343	0/0:14,0:14:39.10:0,39,419	0/0:17,0:17:45.10:0,45,476	0/0:33,0:33:90.21:0,90,959	0/0:34,0:34:90.19:0,90,950	0/0:19,0:19:51.13:0,51,547	0/0:35,0:35:99:0,99,1055	0/0:22,0:22:63.16:0,63,677	0/0:12,0:12:33.08:0,33,355	0/0:28,0:28:81.18:0,81,861	0/0:5,0:5:15.04:0,15,161
chr10	25651198	.	GGAA	G	529.95	PASS	AB=0.968;AC=8;AF=0.143;AN=56;BaseQRankSum=4.004;DP=522;FS=14.223;HRun=0;HaplotypeScore=86.5398;InbreedingCoeff=0.1073;MQ=70.89;MQ0=22;MQRankSum=-2.941;QD=4.42;ReadPosRankSum=-1.233;VQSLOD=0.5490;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:46.49:0,46,973	0/0:4,0:3:9.03:0,9,138	0/0:36,0:23:59.60:0,60,774	0/0:31,0:16:5.15:0,5,257	0/0:16,0:15:45.15:0,45,728	0/0:17,0:16:36.12:0,36,550	0/1:18,0:16:47:47,0,464	0/0:28,0:26:66.21:0,66,977	0/0:14,0:11:30.10:0,30,493	0/0:23,0:22:57.19:0,57,901	0/0:9,0:9:24.08:0,24,382	0/1:17,1:17:0.15:0,0,630	0/0:11,0:10:6.06:0,6,373	0/0:12,0:12:33.10:0,33,505	1/1:4,6:10:21.07:338,21,0	0/1:20,0:20:88.31:88,0,358	0/1:11,0:10:79.32:85,0,79	0/1:24,1:25:97.13:97,0,776	0/0:19,0:17:45.15:0,45,670	0/0:17,0:17:48.16:0,48,785	0/0:29,0:27:72.23:0,72,1090	0/0:20,0:20:49.13:0,49,818	0/0:16,0:16:33.08:0,33,499	0/0:29,0:28:59.84:0,60,887	0/1:16,2:18:3.30:3,0,645	0/0:14,0:14:39.12:0,39,564	0/0:15,0:14:4.38:0,4,428	0/0:5,0:4:3.90:0,4,62
chr10	25651255	.	GAGAAA	G	7185.83	PASS	AB=0.933;AC=27;AF=0.482;AN=56;BaseQRankSum=4.283;DP=623;FS=61.177;HRun=0;HaplotypeScore=96.2003;InbreedingCoeff=-0.5318;MQ=47.26;MQ0=67;MQRankSum=3.017;QD=17.96;ReadPosRankSum=-3.289;VQSLOD=1.0852;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:61.77:0,62,1265	0/1:6,0:6:36.07:108,0,36	0/0:64,0:3:5.73:0,6,31	0/0:87,0:9:5.62:0,6,74	0/1:15,0:13:1.76:309,0,2	0/1:23,0:20:99:338,0,109	0/1:19,0:18:99:151,0,111	0/0:21,0:14:38.31:0,38,262	0/1:16,0:13:35.41:286,0,35	0/1:21,0:16:30.11:470,0,30	1/1:8,0:8:4.99:156,5,0	0/1:10,0:8:21.84:231,0,22	0/1:10,0:12:62.68:331,0,63	0/1:14,0:12:79.92:393,0,80	1/1:2,0:2:3.01:38,3,0	0/1:24,0:21:15.22:517,0,15	0/1:18,0:16:62.15:209,0,62	0/1:22,0:21:45.29:498,0,45	0/1:15,0:11:63.77:212,0,64	0/1:15,0:15:37.82:322,0,38	0/1:22,0:20:29.97:463,0,30	0/1:7,18:23:43.97:101,0,44	0/1:3,12:13:9.99:27,0,10	0/1:36,0:32:48.63:755,0,49	0/1:18,0:16:99:243,0,142	0/1:10,13:21:80.82:440,0,81	1/1:12,0:10:27.18:410,27,0	0/1:8,0:7:14.40:177,0,14
chr10	25651824	.	T	TACTG	31835.98	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-2.956;DP=562;FS=11.420;HRun=0;HaplotypeScore=110.5535;InbreedingCoeff=0.9962;MQ=83.37;MQ0=0;MQRankSum=-9.446;QD=64.71;ReadPosRankSum=6.280;VQSLOD=6.7518;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,12:14:33.11:879,33,0	1/1:1,7:8:21.07:559,21,0	0/0:24,0:24:63.22:0,63,1162	0/0:19,0:19:44.01:0,44,719	1/1:3,23:27:54.19:1437,54,0	1/1:10,17:27:60.21:1565,60,0	1/1:3,10:13:30.10:799,30,0	0/0:27,0:27:72.24:0,72,1297	1/1:4,18:22:63.20:1622,63,0	1/1:4,15:19:54.19:1436,54,0	1/1:3,16:19:35.79:956,36,0	1/1:4,20:24:63.22:1607,63,0	1/1:2,16:18:54.19:1436,54,0	1/1:1,14:15:45.15:1199,45,0	1/1:3,18:21:57.20:1518,57,0	1/1:5,11:16:42.14:1102,42,0	1/1:7,17:23:51.07:1243,51,0	1/1:1,13:14:42.14:1119,42,0	1/1:7,6:13:33.10:714,33,0	1/1:8,26:34:90.28:2284,90,0	1/1:3,11:14:20.64:501,21,0	1/1:2,16:18:45.15:1198,45,0	1/1:2,21:23:57.20:1518,57,0	1/1:6,10:16:29.83:788,30,0	1/1:7,16:23:57.20:1450,57,0	1/1:6,23:29:84.27:2086,84,0	1/1:8,19:27:78.24:1942,78,0	1/1:2,11:13:33.11:879,33,0
chr10	25651873	.	GA	G	10087.24	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=4.263;DP=527;FS=8.340;HRun=9;HaplotypeScore=110.0562;InbreedingCoeff=0.9953;MQ=83.87;MQ0=0;MQRankSum=-8.742;QD=22.37;ReadPosRankSum=6.511;VQSLOD=3.9855;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,20:21:54.03:494,54,0	1/1:2,10:12:27.01:247,27,0	0/0:32,0:30:56.08:0,56,589	0/0:17,1:18:34.62:0,35,357	1/1:8,15:23:50.68:445,51,0	1/1:2,19:22:44.12:485,44,0	1/1:4,10:15:35.05:308,35,0	0/0:26,0:26:66.15:0,66,721	1/1:5,15:20:45.02:411,45,0	1/1:0,11:11:33.01:298,33,0	1/1:2,10:12:27.01:246,27,0	1/1:4,11:15:39:351,39,0	1/1:2,19:21:54.02:494,54,0	1/1:3,10:13:33:297,33,0	1/1:2,0:18:32.59:96,33,0	1/1:0,15:15:45.02:412,45,0	1/1:2,16:19:50.05:440,50,0	1/1:3,15:18:45.02:412,45,0	1/1:1,16:17:48.03:439,48,0	1/1:2,28:30:84.04:768,84,0	1/1:2,11:13:27:247,27,0	1/1:2,15:17:42.02:384,42,0	1/1:5,16:21:53.96:481,54,0	1/1:2,14:16:30.01:274,30,0	1/1:0,18:18:54.03:494,54,0	1/1:1,28:29:60.69:742,61,0	1/1:2,25:27:72.03:658,72,0	1/1:2,6:8:18:164,18,0
chr10	25652875	.	TAA	T	384.42	PASS	AC=2;AF=0.037;AN=54;BaseQRankSum=5.521;DP=359;FS=1.013;HRun=11;HaplotypeScore=48.6352;InbreedingCoeff=0.8584;MQ=68.66;MQ0=1;MQRankSum=-0.077;QD=21.36;ReadPosRankSum=2.120;VQSLOD=2.5447;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:61.09:0,61,911	0/0:4,0:4:12.04:0,12,185	0/0:11,0:12:6.38:0,6,110	0/0:8,0:8:20.43:0,20,260	0/0:3,0:5:15.04:0,15,196	0/0:8,0:9:23.56:0,24,312	0/0:9,0:11:23.55:0,24,291	0/0:26,0:26:57.16:0,57,816	0/0:9,0:9:27.09:0,27,413	0/0:10,0:10:30.10:0,30,443	0/0:11,0:12:36.11:0,36,517	0/0:13,0:13:33.10:0,33,478	0/0:9,0:9:27.09:0,27,414	0/0:19,0:21:59.13:0,59,812	1/1:1,17:18:45.11:479,45,0	0/0:14,0:14:33.04:0,33,479	0/0:17,0:17:48.15:0,48,717	0/0:26,0:26:66.22:0,66,996	0/0:17,0:16:45.11:0,45,661	0/0:10,0:10:30.07:0,30,418	0/0:20,0:20:53.84:0,54,706	./.	0/0:9,0:9:24.05:0,24,314	0/0:16,0:16:42.14:0,42,646	0/0:8,0:8:24.07:0,24,345	0/0:8,0:8:24.06:0,24,331	0/0:11,0:11:33.09:0,33,478	0/0:13,0:13:39.12:0,39,565
chr10	25653423	.	GA	G	356.68	PASS	AB=0.904;AC=7;AF=0.125;AN=56;BaseQRankSum=7.829;DP=570;FS=1.165;HRun=11;HaplotypeScore=62.6460;InbreedingCoeff=0.5460;MQ=71.99;MQ0=0;MQRankSum=0.597;QD=3.79;ReadPosRankSum=0.319;VQSLOD=0.0233;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,1:38:74.42:0,74,967	0/0:7,0:7:12.03:0,12,128	0/0:14,0:13:17.05:0,17,186	0/0:16,0:13:23.83:0,24,214	0/0:27,0:31:80.15:0,80,855	0/0:15,0:15:42.10:0,42,442	0/0:19,0:19:56.83:0,57,566	0/0:25,2:28:13.74:0,14,535	0/0:21,0:21:54.13:0,54,569	0/0:24,0:25:66:0,66,686	0/0:28,0:28:11.01:0,11,655	0/0:15,0:15:42.10:0,42,441	0/0:21,1:23:38.35:0,38,580	0/0:22,0:23:60.02:0,60,620	1/1:0,0:14:26.48:77,26,0	0/0:13,0:14:41.97:0,42,427	1/1:3,19:22:47.93:394,48,0	0/0:14,0:14:33.08:0,33,352	0/1:23,2:26:5.41:5,0,523	0/1:20,3:23:9.89:10,0,513	0/0:21,1:23:29.96:0,30,529	0/0:10,1:11:5.30:0,5,243	0/0:16,1:17:20.32:0,20,393	0/1:8,1:9:0.58:1,0,198	0/0:16,0:16:37.91:0,38,388	0/0:18,1:19:20.47:0,20,423	0/0:25,0:26:69.04:0,69,717	0/0:32,0:33:56.56:0,57,773
chr10	25654265	.	A	AGGAAGC	1319.84	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-0.992;DP=628;FS=0.000;HRun=0;HaplotypeScore=138.8113;InbreedingCoeff=0.7623;MQ=56.99;MQ0=14;MQRankSum=-5.786;QD=65.99;ReadPosRankSum=-1.237;VQSLOD=3.7490;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,105,2382	0/0:5,0:5:15.04:0,15,321	0/0:18,0:2:6.02:0,6,122	0/0:22,0:4:6.02:0,6,120	0/0:29,0:29:87.22:0,87,2022	0/0:20,0:20:57.20:0,57,1389	0/0:26,0:26:78.22:0,78,1693	0/0:25,0:25:69.18:0,69,1548	0/0:22,0:22:66.23:0,66,1616	0/0:21,0:21:60.21:0,60,1469	0/0:15,0:15:45.15:0,45,1089	0/0:29,0:29:81.28:0,81,1944	0/0:15,0:15:45.15:0,45,1064	0/0:24,0:24:66.23:0,66,1601	1/1:5,15:20:45.06:1414,45,0	0/0:20,0:20:57.20:0,57,1379	0/0:41,0:41:99:0,120,2834	0/0:24,0:24:7.41:0,7,1303	0/0:16,0:14:42.12:0,42,958	0/0:21,0:21:60.21:0,60,1427	0/0:14,0:14:42.13:0,42,985	0/0:24,0:24:72.23:0,72,1724	0/0:23,0:23:69.17:0,69,1642	0/0:28,0:28:81.24:0,81,1895	0/0:17,0:17:48.16:0,48,1182	0/0:26,0:26:75.24:0,75,1755	0/0:36,0:35:99:0,105,2365	0/0:10,0:10:27.09:0,27,665
chr10	25654296	.	G	GA	643.59	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-7.029;DP=616;FS=2.735;HRun=8;HaplotypeScore=114.6734;InbreedingCoeff=0.9411;MQ=63.83;MQ0=10;MQRankSum=1.062;QD=24.75;ReadPosRankSum=-4.841;VQSLOD=1.1671;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,130,1182	0/0:6,0:6:14.99:0,15,133	0/0:29,0:12:19.29:0,19,189	0/0:25,0:17:14.22:0,14,248	0/0:31,0:31:81.03:0,81,738	0/0:16,0:16:36.01:0,36,329	0/0:23,0:23:60:0,60,544	1/1:4,22:26:66.17:738,66,0	0/0:20,0:20:41.95:0,42,367	0/0:20,0:20:57.02:0,57,517	0/0:17,0:17:42.01:0,42,381	0/0:26,0:26:54:0,54,486	0/0:14,0:14:42.02:0,42,384	0/0:26,0:26:57.02:0,57,521	0/0:21,0:21:45.01:0,45,407	0/0:24,0:24:60.02:0,60,545	0/0:33,0:33:74.98:0,75,678	0/0:17,0:17:50.97:0,51,451	0/0:17,0:15:35.99:0,36,319	0/0:21,0:21:16.39:0,16,397	0/0:9,0:9:27:0,27,242	0/0:22,0:22:42:0,42,380	0/0:23,0:23:63.03:0,63,576	0/0:22,0:22:48.02:0,48,439	0/0:18,0:18:32.99:0,33,302	0/0:22,0:22:60.01:0,60,541	0/0:29,0:28:72.03:0,72,659	0/0:8,0:8:18.01:0,18,165
chr10	25654311	.	GA	G	11470.91	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-8.663;DP=615;FS=2.456;HRun=8;HaplotypeScore=91.2481;InbreedingCoeff=0.9878;MQ=69.02;MQ0=1;MQRankSum=0.799;QD=23.46;ReadPosRankSum=3.945;VQSLOD=5.2714;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,42:50:99:1159,120,0	1/1:0,7:7:18.03:174,18,0	0/0:17,0:13:16.82:0,17,249	0/0:19,0:17:32.74:0,33,333	1/1:2,34:36:93.14:896,93,0	1/1:0,17:17:45.07:435,45,0	1/1:2,18:20:45.07:435,45,0	0/0:34,0:34:96.29:0,96,1157	1/1:1,15:16:39.06:377,39,0	1/1:3,20:23:60.05:564,60,0	1/1:3,16:19:45.07:433,45,0	1/1:0,23:23:60.10:579,60,0	1/1:2,15:17:39.06:374,39,0	1/1:2,21:23:57.09:550,57,0	0/0:2,0:24:49.06:0,49,259	1/1:4,22:26:48.07:464,48,0	0/0:3,0:32:71.84:0,72,365	1/1:3,13:17:35.09:325,35,0	1/1:1,16:17:45.06:435,45,0	1/1:4,12:16:42.07:405,42,0	1/1:1,9:10:24.04:232,24,0	1/1:2,15:17:42.06:406,42,0	1/1:3,27:30:75.09:717,75,0	1/1:1,19:20:51.08:493,51,0	1/1:2,18:20:48.08:463,48,0	1/1:1,22:23:66.08:630,66,0	1/1:3,30:33:84.13:811,84,0	1/1:1,8:9:12.02:116,12,0
chr10	25654607	.	CT	C	1118.85	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=8.098;DP=725;FS=7.316;HRun=1;HaplotypeScore=70.8985;InbreedingCoeff=0.9978;MQ=87.93;MQ0=0;MQRankSum=-1.926;QD=34.96;ReadPosRankSum=0.619;VQSLOD=3.3025;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:38:99:0,117,1817	0/0:8,0:8:24.07:0,24,359	0/0:31,0:31:86.53:0,87,1317	0/0:24,0:24:62.41:0,62,925	0/0:33,0:33:93.30:0,93,1435	0/0:16,0:16:48.16:0,48,767	0/0:26,0:26:78.25:0,78,1224	0/0:25,0:25:75.26:0,75,1185	0/0:28,0:28:84.29:0,84,1343	0/0:32,0:32:96.33:0,96,1527	0/0:16,0:16:48.16:0,48,759	0/0:32,0:32:96.31:0,96,1512	0/0:14,0:14:39.13:0,39,624	0/0:36,0:36:99:0,108,1701	1/1:0,32:32:87.29:1214,87,0	0/0:34,0:34:99:0,102,1631	0/0:34,0:34:99:0,102,1622	0/0:24,0:24:69.24:0,69,1103	0/0:13,0:13:39.13:0,39,614	0/0:24,0:24:72.25:0,72,1150	0/0:32,0:32:96.28:0,96,1507	0/0:18,0:18:54.16:0,54,817	0/0:23,0:23:69.24:0,69,1103	0/0:27,0:27:81.28:0,81,1295	0/0:17,0:17:51.17:0,51,816	0/0:41,0:41:99:0,120,1889	0/0:33,0:33:99:0,99,1556	0/0:13,0:13:39.13:0,39,599
chr10	25654980	.	G	GA	6212.59	PASS	AB=0.734;AC=46;AF=0.821;AN=56;BaseQRankSum=-3.935;DP=495;FS=5.952;HRun=12;HaplotypeScore=67.9155;InbreedingCoeff=0.0961;MQ=73.87;MQ0=1;MQRankSum=-0.582;QD=12.92;ReadPosRankSum=1.450;VQSLOD=4.9499;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,17:22:24.03:229,24,0	0/1:3,4:7:11.65:50,0,12	0/0:14,0:13:23.11:0,23,151	0/1:10,0:9:3.75:4,0,53	1/1:6,14:21:14.29:250,14,0	1/1:4,17:23:25.85:386,26,0	1/1:5,10:15:9.86:245,10,0	0/1:25,5:30:65.91:66,0,234	1/1:2,9:12:21.74:186,22,0	1/1:8,15:24:38.60:339,39,0	1/1:2,16:18:14.14:290,14,0	1/1:2,14:16:11.13:265,11,0	1/1:3,21:25:53.92:510,54,0	0/1:3,9:12:0.88:154,0,1	1/1:5,0:20:38.28:192,38,0	1/1:5,8:14:23.87:219,24,0	1/1:5,0:19:22.73:114,23,0	1/1:7,14:23:0.88:296,1,0	0/1:9,9:19:9.92:304,0,10	1/1:8,16:25:25.82:362,26,0	0/1:4,8:12:4.04:113,0,4	1/1:2,9:12:26.78:229,27,0	0/1:3,11:14:19.57:134,0,20	1/1:3,11:15:32.89:306,33,0	1/1:4,18:22:14.15:299,14,0	1/1:6,16:22:21.36:340,21,0	1/1:8,16:24:17.07:316,17,0	0/1:4,0:4:14.39:14,0,16
chr10	25655127	.	A	AT	436.14	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=1.645;DP=613;FS=3.245;HRun=9;HaplotypeScore=60.4325;InbreedingCoeff=0.8058;MQ=74.89;MQ0=0;MQRankSum=0.128;QD=24.23;ReadPosRankSum=-0.356;VQSLOD=4.3845;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,111,936	0/0:10,0:10:29.99:0,30,260	0/0:14,0:13:23.58:0,24,176	0/0:9,0:10:9.21:0,9,70	0/0:21,0:21:59.97:0,60,516	0/0:20,0:20:59.90:0,60,508	0/0:18,0:18:38.83:0,39,324	0/0:26,0:26:56.95:0,57,489	0/0:16,0:16:47.99:0,48,417	0/0:30,0:30:83.97:0,84,729	0/0:18,0:18:53.97:0,54,465	0/0:24,0:24:68.98:0,69,596	0/0:24,0:25:68.02:0,68,579	0/0:17,0:17:41.97:0,42,361	1/1:2,16:18:48.13:531,48,0	0/0:15,0:16:46.98:0,47,384	0/0:27,0:28:76.97:0,77,645	0/0:25,0:25:53.88:0,54,453	0/0:24,0:24:59.90:0,60,504	0/0:21,0:21:56.93:0,57,482	0/0:29,0:29:80.93:0,81,693	0/0:22,0:22:62.98:0,63,547	0/0:28,0:28:71.93:0,72,616	0/0:16,0:16:47.99:0,48,416	0/0:26,0:26:74.98:0,75,650	0/0:20,0:20:44.98:0,45,391	0/0:38,0:38:99:0,108,931	0/0:11,1:12:2.82:0,3,253
chr10	25656737	.	C	CT	13955.48	PASS	AB=0.568;AC=47;AF=0.839;AN=56;BaseQRankSum=-9.395;DP=662;FS=11.092;HRun=9;HaplotypeScore=61.1021;InbreedingCoeff=0.8595;MQ=66.52;MQ0=3;MQRankSum=-2.932;QD=24.74;ReadPosRankSum=4.999;VQSLOD=4.8687;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,33:34:67.20:970,67,0	1/1:1,18:19:48.13:531,48,0	0/0:19,0:16:27.52:0,28,257	0/0:14,0:11:21.17:0,21,157	1/1:5,26:31:66.14:717,66,0	1/1:1,16:18:44.95:479,45,0	1/1:4,22:26:37.11:638,37,0	0/0:36,0:36:71.93:0,72,620	0/1:6,18:25:15.16:515,0,15	1/1:3,20:23:57.15:631,57,0	1/1:2,13:15:36.10:398,36,0	1/1:4,14:18:39.11:431,39,0	1/1:5,15:20:22.07:472,22,0	1/1:1,19:20:51.14:564,51,0	0/0:28,0:28:83.96:0,84,724	1/1:6,23:29:43.13:704,43,0	1/1:5,25:29:40.12:671,40,0	1/1:3,12:15:36.10:398,36,0	1/1:7,14:19:25.17:489,25,0	1/1:5,29:34:12.04:804,12,0	1/1:7,24:31:40.12:671,40,0	1/1:2,9:11:27.07:299,27,0	1/1:2,16:18:19.09:438,19,0	1/1:6,27:33:26.11:744,26,0	1/1:2,13:15:36.09:392,36,0	1/1:6,20:25:57.15:630,57,0	1/1:5,28:33:62.23:872,62,0	1/1:3,16:19:45.12:498,45,0
chr10	25657028	.	A	AACACACACACACAC	17985.60	PASS	AB=1.000;AC=49;AF=0.907;AN=54;BaseQRankSum=-2.103;DP=580;FS=1.791;HRun=0;HaplotypeScore=252.0188;InbreedingCoeff=0.5155;MQ=61.87;MQ0=5;MQRankSum=-0.467;QD=35.40;ReadPosRankSum=1.564;VQSLOD=4.2738;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:26:11.62:213,12,0	1/1:9,1:10:6.02:389,6,0	./.	0/0:24,0:15:3:0,3,74	1/1:23,2:25:15.52:699,16,0	1/1:25,0:25:22.09:728,22,0	1/1:23,0:23:30.10:1224,30,0	0/0:20,0:25:9.42:0,9,87	1/1:20,4:27:29.78:1589,30,0	1/1:25,0:25:36.07:1273,36,0	1/1:13,0:13:8.45:294,8,0	1/1:19,0:19:9.50:311,10,0	1/1:17,3:21:24.07:1050,24,0	1/1:13,1:15:9.03:452,9,0	1/1:17,0:19:11.78:437,12,0	1/1:15,4:21:21.07:1159,21,0	1/1:19,0:18:26.58:594,27,0	0/1:15,0:15:1.96:394,0,2	1/1:16,0:15:26.11:791,26,0	1/1:19,3:20:5.81:360,6,0	1/1:27,0:26:8.96:202,9,0	1/1:7,0:7:12.04:404,12,0	1/1:13,2:17:20.95:1086,21,0	1/1:25,0:26:17.53:664,18,0	1/1:15,0:15:15.04:470,15,0	1/1:36,0:35:60.21:2229,60,0	1/1:20,0:20:20.89:817,21,0	1/1:9,0:11:6.02:155,6,0
chr10	25657212	.	A	AT	11083.30	PASS	AB=1.000;AC=47;AF=0.839;AN=56;BaseQRankSum=8.074;DP=432;FS=2.442;HRun=6;HaplotypeScore=82.0706;InbreedingCoeff=0.9022;MQ=64.18;MQ0=0;MQRankSum=0.853;QD=30.20;ReadPosRankSum=4.021;VQSLOD=5.4132;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,15:18:45.06:545,45,0	1/1:1,8:9:15.05:189,15,0	0/1:4,0:4:0:0,0,0	0/0:4,0:3:5.99:0,6,49	1/1:1,22:23:57.18:717,57,0	1/1:1,20:21:57.18:717,57,0	1/1:1,12:13:27.09:340,27,0	0/0:36,0:36:96.16:0,96,952	1/1:2,10:12:24.08:302,24,0	1/1:2,12:14:39.06:446,39,0	1/1:3,24:27:72.15:885,72,0	1/1:1,16:17:42.13:528,42,0	1/1:5,3:8:9.03:113,9,0	1/1:3,9:12:30.10:376,30,0	0/0:17,0:17:51.10:0,51,508	1/1:0,12:12:30.10:377,30,0	0/0:8,0:8:24.05:0,24,245	1/1:0,11:11:33.11:414,33,0	1/1:0,19:19:57.17:703,57,0	1/1:3,25:28:72.13:869,72,0	1/1:0,7:7:21.07:264,21,0	1/1:0,5:5:14.96:168,15,0	1/1:3,16:19:45.04:566,45,0	1/1:2,8:10:24.08:302,24,0	1/1:1,17:18:48.15:604,48,0	1/1:2,17:19:51.16:641,51,0	1/1:3,17:19:42.13:528,42,0	1/1:4,17:21:39.04:491,39,0
chr10	25657653	.	G	GA	11085.07	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-4.513;DP=608;FS=0.000;HRun=4;HaplotypeScore=117.7675;InbreedingCoeff=0.9012;MQ=71.59;MQ0=0;MQRankSum=-2.084;QD=19.94;ReadPosRankSum=2.748;VQSLOD=3.6561;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,19:22:44.28:465,44,0	1/1:2,9:11:27.48:289,27,0	0/0:16,0:14:6.70:0,7,297	0/0:11,0:10:9.37:0,9,149	1/1:8,24:32:63.15:649,63,0	1/1:7,21:28:55.99:629,56,0	1/1:3,18:21:35.58:417,36,0	1/1:29,0:29:37.03:129,37,0	1/1:6,17:23:54.64:567,55,0	1/1:2,22:24:66.05:658,66,0	1/1:9,24:33:43.99:457,44,0	1/1:5,17:22:41.78:522,42,0	1/1:7,16:23:51.60:504,52,0	1/1:3,15:18:44.21:428,44,0	1/1:15,0:15:15.05:42,15,0	1/1:2,11:13:36.54:367,37,0	0/0:24,0:24:19.09:0,19,182	1/1:8,17:25:48.89:571,49,0	1/1:11,12:23:38.02:342,38,0	1/1:3,23:26:57.60:569,58,0	1/1:2,5:7:6.12:152,6,0	1/1:4,18:22:42.15:444,42,0	1/1:7,8:15:33.49:325,33,0	1/1:3,14:17:31.62:429,32,0	1/1:0,27:27:54.13:578,54,0	1/1:7,9:16:27.15:310,27,0	1/1:9,34:43:56.43:766,56,0	1/1:7,14:21:36.83:477,37,0
chr10	25657659	.	GA	G	813.06	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-6.715;DP=613;FS=3.861;HRun=10;HaplotypeScore=155.3792;InbreedingCoeff=0.9941;MQ=74.38;MQ0=0;MQRankSum=-0.975;QD=18.48;ReadPosRankSum=-2.068;VQSLOD=1.9799;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:48.93:0,49,263	0/0:12,0:12:28.88:0,29,167	0/0:15,0:14:26.07:0,26,267	0/0:17,0:15:21.64:0,22,269	0/0:30,0:30:70.77:0,71,414	0/0:27,0:27:66.38:0,66,366	0/0:21,0:21:46.07:0,46,249	1/1:5,23:28:65.79:551,66,0	0/0:23,0:23:57.65:0,58,328	0/0:27,0:27:70.71:0,71,407	0/0:30,0:31:60.30:0,60,350	0/0:22,0:22:54.75:0,55,317	0/0:23,0:24:60.63:0,61,346	0/0:19,0:19:46.16:0,46,254	1/1:1,15:16:44.96:384,45,0	0/0:16,0:16:41.39:0,41,245	0/0:21,2:23:29.36:0,29,523	0/0:24,0:24:60.72:0,61,357	0/0:24,0:24:53.64:0,54,378	0/0:26,0:26:57.66:0,58,327	0/0:7,0:7:20.39:0,20,139	0/0:18,0:19:43.09:0,43,225	0/0:14,0:14:31.80:0,32,179	0/0:19,0:19:49.63:0,50,281	0/0:28,0:28:57.80:0,58,336	0/0:15,0:15:37.89:0,38,245	0/0:42,0:42:89.75:0,90,555	0/0:21,0:21:58.69:0,59,361
chr10	25658218	.	GTT	G	5864.83	PASS	AB=0.651;AC=43;AF=0.768;AN=56;BaseQRankSum=-1.886;DP=566;FS=1.047;HRun=14;HaplotypeScore=83.7423;InbreedingCoeff=0.4500;MQ=65.30;MQ0=12;MQRankSum=0.860;QD=12.72;ReadPosRankSum=6.849;VQSLOD=3.7552;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,20:25:16.56:335,17,0	1/1:2,7:11:5.68:149,6,0	0/0:29,0:15:6.29:0,6,42	0/0:35,0:16:8.10:0,8,94	1/1:7,18:26:20:332,20,0	1/1:5,13:17:17.95:167,18,0	1/1:5,13:21:38.07:312,38,0	0/0:26,0:29:64.87:0,65,695	1/1:4,8:12:20.97:191,21,0	0/1:10,9:20:6.23:181,0,6	1/1:9,20:30:42.81:466,43,0	1/1:4,8:12:20.99:194,21,0	1/1:12,8:19:15.96:228,16,0	0/1:9,9:18:10.97:227,0,11	1/1:6,0:23:36.55:163,37,0	1/1:5,11:17:7.03:242,7,0	0/0:11,0:11:23.49:0,23,246	1/1:5,12:17:12.62:257,13,0	0/1:18,7:25:65.70:132,0,66	1/1:5,18:25:30.07:370,30,0	1/1:4,7:9:20.58:194,21,0	0/1:4,13:20:6.28:212,0,6	1/1:8,14:22:38.76:358,39,0	1/1:3,7:10:8.97:130,9,0	0/1:9,13:22:1.25:217,0,1	1/1:7,10:16:29.89:277,30,0	1/1:11,18:31:28.02:505,28,0	1/1:4,1:5:2.99:28,3,0
chr10	25659816	.	C	CAATTTACT	4419.06	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-0.949;DP=521;FS=0.000;HRun=0;HaplotypeScore=126.3219;InbreedingCoeff=0.9468;MQ=77.79;MQ0=0;MQRankSum=-8.709;QD=86.65;ReadPosRankSum=-3.427;VQSLOD=3.9622;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:54.18:0,54,1424	0/0:13,0:13:39.11:0,39,927	0/0:19,0:19:47.95:0,48,1171	0/0:6,0:6:9.01:0,9,244	0/0:24,0:24:69.24:0,69,1871	0/0:15,0:15:39.13:0,39,1056	0/0:14,0:14:24.08:0,24,651	1/1:24,10:36:87.26:3149,87,0	0/0:16,0:16:45.13:0,45,1014	0/0:25,0:25:66.23:0,66,1739	0/0:25,0:25:60.21:0,60,1528	0/0:15,0:15:42.14:0,42,1108	0/0:14,0:14:39.12:0,39,1000	0/0:15,0:15:45.14:0,45,1133	0/0:22,0:22:60.20:0,60,1500	0/0:21,0:21:54.19:0,54,1465	1/1:6,8:15:30.10:1270,30,0	0/0:15,0:15:39.13:0,39,1018	0/0:14,0:14:35.99:0,36,899	0/0:26,0:26:66.20:0,66,1647	0/0:5,0:5:12.04:0,12,285	0/0:19,0:19:45.15:0,45,1219	0/0:26,0:26:72.25:0,72,1901	0/0:16,0:16:36.12:0,36,976	0/0:22,0:22:60.21:0,60,1604	0/0:26,0:26:63.21:0,63,1633	0/0:29,0:28:84.29:0,84,2275	0/0:8,0:8:15.05:0,15,403
chr10	25660256	.	A	AGATG	14176.45	PASS	AB=0.961;AC=49;AF=0.942;AN=52;BaseQRankSum=-6.725;DP=1170;FS=32.744;HRun=0;HaplotypeScore=256.7084;InbreedingCoeff=0.0660;MQ=38.80;MQ0=76;MQRankSum=3.488;QD=13.55;ReadPosRankSum=-2.292;VQSLOD=2.7210;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:17:9.41:39,9,0	1/1:24,0:17:8.82:153,9,0	./.	./.	1/1:19,0:14:9.03:208,9,0	1/1:29,5:28:30.10:699,30,0	1/1:35,2:29:30.03:597,30,0	1/1:24,0:17:0.18:0,0,0	1/1:51,0:38:48.79:591,49,0	1/1:40,1:30:5.19:387,5,0	1/1:16,1:13:17.04:304,17,0	1/1:57,7:46:46.53:744,47,0	1/1:66,5:62:65.10:1249,65,0	1/1:54,11:51:63.18:1398,63,0	0/1:62,0:43:30.41:164,0,30	0/1:58,9:56:2.90:1274,0,3	0/1:38,0:48:56.10:56,0,348	1/1:38,7:43:73.08:1278,73,0	1/1:24,1:17:12.04:282,12,0	1/1:22,1:19:19.38:377,19,0	1/1:73,7:62:48.34:951,48,0	1/1:28,3:27:24.55:560,25,0	1/1:13,3:12:15.52:350,16,0	1/1:37,6:37:16.09:645,16,0	1/1:23,2:20:21.94:407,22,0	1/1:47,1:33:29.58:564,30,0	1/1:35,2:34:13.10:535,13,0	1/1:15,2:15:18.06:365,18,0
chr10	25660316	.	A	AGGAT	4887.48	PASS	AB=0.998;AC=29;AF=0.518;AN=56;BaseQRankSum=2.238;DP=744;FS=5.500;HRun=0;HaplotypeScore=245.9057;InbreedingCoeff=-0.5158;MQ=41.18;MQ0=13;MQRankSum=-3.068;QD=7.28;ReadPosRankSum=0.492;VQSLOD=3.5470;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:6,0:6:5.68:27,6,0	0/0:6,0:5:8.90:0,9,74	0/0:35,0:17:20.97:0,21,198	0/0:31,0:15:14.94:0,15,132	0/1:16,0:13:18.08:84,0,18	0/1:22,0:21:99:140,0,144	0/1:31,0:29:99:106,0,140	1/1:31,0:26:32.95:437,33,0	0/1:41,0:37:99:290,0,247	0/1:28,0:26:99:179,0,288	0/1:14,0:13:49.77:50,0,91	0/1:41,0:40:99:475,0,139	0/1:40,0:34:99:314,0,366	0/1:35,0:32:99:203,0,130	1/1:39,0:36:65.92:977,66,0	0/1:33,0:30:91:91,0,297	1/1:22,8:26:39.89:605,40,0	0/1:25,1:24:99:226,0,161	0/1:25,0:21:99:104,0,201	0/1:21,0:21:44.19:44,0,201	0/1:55,0:47:82.67:83,0,256	0/1:15,0:15:61.23:61,0,212	0/1:12,0:11:7.74:8,0,103	0/1:29,0:25:25.88:26,0,237	0/1:22,0:21:99:111,0,181	0/1:22,0:21:99:131,0,289	0/1:20,0:19:41.96:42,0,213	0/1:10,0:10:72.70:73,0,75
chr10	25660340	.	A	AGGAT	11527.17	PASS	AB=1.000;AC=47;AF=0.839;AN=56;BaseQRankSum=-1.173;DP=628;FS=6.315;HRun=0;HaplotypeScore=176.7122;InbreedingCoeff=0.5402;MQ=40.15;MQ0=22;MQRankSum=-2.440;QD=21.19;ReadPosRankSum=6.257;VQSLOD=3.7087;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:7,0:7:0.92:35,0,1	1/1:3,1:4:2.98:22,3,0	0/0:31,0:14:21.04:0,21,284	0/0:29,0:14:28.81:0,29,455	1/1:10,3:10:12.04:302,12,0	1/1:14,2:14:21.07:431,21,0	1/1:21,6:23:15.01:301,15,0	0/0:24,0:19:38.53:0,39,549	1/1:24,5:25:45.14:955,45,0	1/1:21,4:20:35.99:721,36,0	1/1:9,5:12:12.04:262,12,0	1/1:32,6:35:77.90:1504,78,0	1/1:33,3:28:54.06:1001,54,0	1/1:27,3:23:12.85:815,13,0	0/1:41,0:30:79.42:203,0,79	1/1:25,3:25:46.79:723,47,0	0/1:20,0:16:99:108,0,112	1/1:15,2:16:24.95:539,25,0	1/1:18,1:17:24.06:461,24,0	1/1:21,3:21:21.07:381,21,0	1/1:42,3:36:20.15:428,20,0	1/1:12,3:14:11.96:236,12,0	1/1:10,1:9:8.89:127,9,0	1/1:20,2:21:5.40:325,5,0	1/1:17,3:19:29.95:546,30,0	1/1:16,4:19:35.84:646,36,0	1/1:13,2:15:13.60:230,14,0	1/1:5,3:8:9.03:226,9,0
chr10	25660352	.	T	TG	1408.48	PASS	AB=0.960;AC=27;AF=0.482;AN=56;BaseQRankSum=-2.040;DP=675;FS=6.956;HRun=1;HaplotypeScore=195.6897;InbreedingCoeff=-0.4208;MQ=37.18;MQ0=34;MQRankSum=1.257;QD=2.52;ReadPosRankSum=1.740;VQSLOD=-0.5145;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:7,0:5:1.07:9,0,1	0/1:5,0:5:15.97:16,0,33	0/0:30,0:10:27.07:0,27,325	0/0:35,0:16:48.07:0,48,583	1/1:12,1:9:8.07:37,8,0	0/1:19,1:16:19.88:20,0,41	1/1:26,1:22:2.11:35,2,0	0/0:27,0:19:57.14:0,57,716	0/1:32,2:25:79.77:87,0,80	0/1:22,1:16:19.69:123,0,20	0/1:11,0:8:11.31:11,0,14	0/1:46,1:41:97.55:98,0,236	0/1:32,1:26:67.90:83,0,68	0/1:33,2:25:46.62:47,0,181	0/1:41,0:28:4.36:4,0,537	0/1:24,2:24:88.20:120,0,88	0/0:24,0:20:23.31:0,23,508	0/1:23,1:19:99:109,0,202	0/1:16,0:13:67.72:68,0,84	0/1:20,0:17:28.28:97,0,28	0/1:43,5:40:4.62:139,0,5	0/1:16,0:14:2.68:3,0,14	0/1:12,0:10:4.20:4,0,8	0/1:20,1:21:45.88:144,0,46	0/1:20,2:20:36.54:66,0,37	0/1:19,1:19:99:138,0,138	0/1:19,0:18:43.81:82,0,44	1/1:6,0:6:7.12:26,7,0
chr10	25660353	.	GATA	G	1881.53	PASS	AB=0.894;AC=24;AF=0.429;AN=56;BaseQRankSum=-1.737;DP=661;FS=10.233;HRun=0;HaplotypeScore=195.4384;InbreedingCoeff=-0.5667;MQ=37.19;MQ0=36;MQRankSum=1.563;QD=3.40;ReadPosRankSum=-5.066;VQSLOD=0.1760;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:5,2:3:8.40:47,8,0	0/1:6,0:6:15.03:16,0,15	0/0:29,0:10:22.05:0,22,449	0/0:35,0:16:48.14:0,48,923	0/1:9,3:9:15.71:16,0,16	0/1:15,5:15:39.71:47,0,40	0/1:27,0:22:14.51:51,0,15	0/0:26,0:19:53.43:0,53,1050	0/1:30,3:24:99:116,0,156	0/1:17,4:14:84.98:168,0,85	0/0:10,1:8:14.55:0,15,116	0/1:42,6:40:99:175,0,348	0/1:28,4:25:99:185,0,141	0/1:33,2:25:59.25:59,0,219	0/1:37,2:25:64.27:64,0,673	0/1:27,1:24:98.69:99,0,213	0/1:23,1:20:21.46:21,0,614	0/1:18,6:19:99:149,0,113	0/1:13,2:12:82.71:83,0,178	0/1:17,3:17:14.88:117,0,15	0/1:48,6:41:9.76:157,0,10	0/1:14,3:14:6.16:6,0,61	0/1:10,3:10:5.20:5,0,7	0/1:17,4:20:75.48:161,0,75	0/1:17,3:18:49.77:50,0,96	0/1:18,1:18:99:141,0,211	0/1:17,1:17:29.09:109,0,29	0/0:6,0:6:8.92:0,9,92
chr10	25660356	.	A	AGATG	6657.24	PASS	AB=0.903;AC=36;AF=0.643;AN=56;BaseQRankSum=-2.910;DP=675;FS=12.937;HRun=0;HaplotypeScore=194.9245;InbreedingCoeff=-0.0174;MQ=36.25;MQ0=43;MQRankSum=-0.984;QD=11.46;ReadPosRankSum=4.199;VQSLOD=3.5215;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:9,0:4:10.25:10,0,28	0/0:5,0:5:3.01:0,3,38	0/0:29,0:11:14.95:0,15,139	0/0:37,0:16:3.26:0,3,247	0/1:10,1:9:0:0,0,0	1/1:18,3:15:16.25:277,16,0	1/1:19,9:23:12.61:230,13,0	0/0:23,0:16:5.34:0,5,38	0/1:31,4:23:23.92:407,0,24	1/1:15,7:14:24.08:534,24,0	1/1:8,3:8:3.01:60,3,0	0/1:38,12:42:60.58:1012,0,61	1/1:24,8:25:43.39:847,43,0	1/1:28,11:26:6.52:722,7,0	0/1:40,0:25:11.98:499,0,12	0/1:20,9:24:2.46:562,0,2	0/1:26,0:22:21.42:21,0,120	0/1:24,1:20:99:119,0,126	1/1:13,2:10:20.94:395,21,0	1/1:16,6:18:2.97:20,3,0	1/1:48,5:39:5.06:143,5,0	1/1:13,4:14:5.50:59,6,0	1/1:11,2:9:2.99:52,3,0	0/1:20,2:22:21.10:86,0,21	1/1:14,4:16:6.96:126,7,0	0/1:16,3:16:48.06:310,0,48	0/1:14,2:13:0.58:99,0,1	0/1:5,1:6:18.21:67,0,18
chr10	25660375	.	T	TG	863.10	PASS	AB=0.933;AC=19;AF=0.339;AN=56;BaseQRankSum=6.017;DP=847;FS=2.998;HRun=1;HaplotypeScore=208.4630;InbreedingCoeff=-0.5057;MQ=30.95;MQ0=107;MQRankSum=-2.380;QD=1.31;ReadPosRankSum=4.518;VQSLOD=-0.6421;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:18,1:6:24.53:25,0,68	0/0:9,0:7:14.07:0,14,155	0/0:21,0:5:15.05:0,15,182	0/0:32,0:12:26.38:0,26,277	0/0:13,0:6:3:0,3,39	0/1:22,1:14:23.35:40,0,23	0/0:36,2:24:14.57:0,15,193	0/0:34,2:12:27.03:0,27,330	0/1:36,4:22:82.56:83,0,164	0/1:37,0:16:56.24:56,0,118	0/0:12,0:5:2.57:0,3,11	0/1:51,7:43:89.07:89,0,325	0/1:42,2:32:99:100,0,290	0/1:42,3:30:45.32:45,0,321	0/1:37,21:31:99:123,0,167	0/1:36,0:33:2.20:2,0,357	0/1:21,9:22:99:136,0,278	0/1:27,1:23:2.56:3,0,389	0/1:22,1:9:58.22:58,0,59	0/1:20,0:14:13.74:14,0,33	0/1:55,14:40:33.59:34,0,69	0/1:23,0:16:10.97:11,0,36	0/1:20,0:12:7.64:8,0,33	0/1:27,2:21:35.32:35,0,115	0/1:19,1:17:47.57:48,0,119	0/1:30,1:17:99:106,0,286	0/0:21,0:18:23.03:0,23,275	0/0:6,0:6:7.98:0,8,149
chr10	25660420	.	GGAT	G	5321.53	PASS	AB=0.852;AC=26;AF=0.481;AN=54;BaseQRankSum=-5.247;DP=1154;FS=65.536;HRun=0;HaplotypeScore=246.8676;InbreedingCoeff=-0.4659;MQ=24.24;MQ0=188;MQRankSum=-1.632;QD=5.46;ReadPosRankSum=-0.085;VQSLOD=1.4221;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:11:52.27:52,0,159	0/1:18,2:15:99:137,0,225	0/0:17,0:1:3:0,3,29	./.	0/1:20,3:10:0:0,0,0	0/1:22,10:21:50.58:265,0,51	0/1:31,5:19:82.65:178,0,83	0/1:43,0:8:5.62:6,0,276	0/1:39,12:28:99:234,0,613	0/1:56,9:30:99:306,0,623	1/1:12,10:14:17.23:215,17,0	0/1:63,13:45:99:389,0,676	0/1:49,15:47:99:569,0,997	0/1:51,17:39:99:480,0,730	0/0:90,7:62:57.35:0,57,1726	0/1:50,25:58:99:689,0,1186	0/0:42,0:30:12.32:0,12,1193	0/1:28,7:24:99:181,0,512	0/1:15,1:3:32.93:37,0,33	1/1:17,9:16:12.36:168,12,0	0/1:77,9:48:99:169,0,111	0/1:24,7:18:87.52:131,0,88	1/1:19,14:22:7.22:115,7,0	0/1:23,9:22:99:142,0,115	0/1:27,5:20:99:140,0,181	0/1:36,12:20:99:300,0,377	0/1:23,11:27:99:418,0,466	0/0:13,0:8:17.29:0,17,140
chr10	25660476	.	T	TG	4540.57	PASS	AB=0.910;AC=28;AF=0.519;AN=54;BaseQRankSum=-4.672;DP=941;FS=13.694;HRun=1;HaplotypeScore=235.5392;InbreedingCoeff=-0.5885;MQ=27.79;MQ0=116;MQRankSum=2.596;QD=5.24;ReadPosRankSum=7.162;VQSLOD=-0.3304;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,3:14:3.19:0,3,215	0/1:8,6:13:17.91:197,0,18	0/0:11,1:1:3.01:0,3,39	./.	1/1:22,0:14:5.88:36,6,0	0/1:18,1:15:96.42:96,0,160	1/1:35,6:21:12.87:204,13,0	0/0:28,0:5:0.10:0,0,82	0/1:53,7:44:99:415,0,320	0/1:50,2:31:99:355,0,193	1/1:21,3:19:5.70:148,6,0	0/1:55,7:48:99:357,0,535	0/1:46,3:40:99:460,0,292	0/1:53,1:35:99:323,0,438	0/1:65,6:49:23.96:24,0,1200	0/1:42,6:38:99:485,0,277	0/1:17,6:16:63.73:64,0,226	0/1:19,7:19:91.41:278,0,91	0/1:12,0:10:16.63:115,0,17	0/1:30,0:21:48.02:48,0,150	1/1:82,2:48:5.55:253,6,0	0/1:18,1:14:10.29:10,0,32	0/1:18,3:18:21.19:21,0,47	0/1:23,3:19:39.69:64,0,40	0/1:17,1:11:5.19:5,0,47	0/1:41,2:29:99:321,0,306	0/1:29,0:24:99:248,0,107	0/1:7,0:6:11.93:12,0,105
chr10	25660477	.	G	GA	7387.10	PASS	AB=0.761;AC=29;AF=0.537;AN=54;BaseQRankSum=-7.586;DP=931;FS=22.020;HRun=1;HaplotypeScore=225.7278;InbreedingCoeff=-0.3445;MQ=27.83;MQ0=114;MQRankSum=2.305;QD=9.39;ReadPosRankSum=6.841;VQSLOD=0.3818;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:14:18.19:0,18,225	0/1:12,2:13:15.19:146,0,15	0/0:13,0:1:3.01:0,3,39	./.	1/1:11,10:13:6.02:90,6,0	0/1:13,6:15:99:191,0,148	1/1:26,18:21:30.06:449,30,0	0/0:27,0:5:11.47:0,11,106	0/1:36,26:44:99:627,0,317	0/1:30,20:30:99:691,0,169	1/1:10,14:19:20.84:276,21,0	0/1:43,19:48:99:642,0,492	0/1:24,24:38:99:804,0,291	0/1:36,18:35:99:529,0,425	0/0:70,0:49:37.97:0,38,1250	0/1:29,18:37:99:709,0,285	0/1:22,0:16:28.79:29,0,280	0/1:24,4:20:89.61:152,0,90	0/1:3,9:10:15.07:262,0,15	0/1:16,14:21:80.78:210,0,81	0/1:67,17:48:1.34:263,0,1	1/1:14,6:15:1.31:42,1,0	1/1:13,10:19:7.12:108,7,0	0/1:15,11:19:39.19:80,0,39	1/1:8,10:11:2.74:45,3,0	0/1:27,14:29:99:595,0,339	0/1:17,14:24:89.76:414,0,90	0/1:6,1:6:32.88:33,0,102
chr10	25660505	.	TGGA	T	808.95	PASS	AB=0.930;AC=15;AF=0.268;AN=56;BaseQRankSum=8.238;DP=651;FS=27.553;HRun=0;HaplotypeScore=192.8493;InbreedingCoeff=-0.1937;MQ=27.75;MQ0=75;MQRankSum=-4.997;QD=2.86;ReadPosRankSum=-3.607;VQSLOD=0.0048;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:21,0:12:1.45:1,0,88	0/0:8,0:6:2.01:0,2,107	0/0:28,0:1:3.01:0,3,42	0/0:17,0:1:3:0,3,27	0/0:14,0:9:5.68:0,6,28	0/0:8,0:7:17.58:0,18,107	0/0:27,1:16:23.33:0,23,141	1/1:11,0:3:3.01:46,3,0	0/1:38,0:29:77.67:78,0,316	0/0:29,0:18:28.10:0,28,199	0/0:13,1:13:13.43:0,13,63	0/1:34,2:29:92.76:93,0,300	0/0:26,0:21:10.62:0,11,259	0/1:30,3:24:99:110,0,229	0/0:42,0:30:0.55:0,1,260	0/1:23,0:16:30.23:30,0,143	1/1:13,1:11:0.08:96,0,0	0/1:28,2:22:34.18:295,0,34	0/0:13,1:5:5.97:0,6,62	0/0:19,2:17:5.46:0,5,54	0/0:63,1:42:20.77:0,21,173	0/0:23,2:18:5.38:0,5,41	0/1:12,1:10:15.43:25,0,15	0/1:18,2:17:47.42:66,0,47	0/1:11,2:11:12.96:13,0,43	0/0:25,0:20:43.08:0,43,339	0/1:16,3:15:85.95:86,0,138	0/1:5,0:3:13.03:14,0,13
chr10	25660508	.	A	AT	1038.70	PASS	AB=0.865;AC=18;AF=0.321;AN=56;BaseQRankSum=7.642;DP=641;FS=26.233;HRun=0;HaplotypeScore=184.6546;InbreedingCoeff=-0.3735;MQ=28.19;MQ0=63;MQRankSum=-3.845;QD=2.92;ReadPosRankSum=-3.763;VQSLOD=1.1466;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:17,4:12:38.60:39,0,53	0/1:8,1:7:14.02:14,0,60	0/0:27,0:1:3.01:0,3,42	0/0:16,0:1:3.01:0,3,30	0/1:14,2:12:24.73:42,0,25	0/0:5,0:6:17.52:0,18,105	0/0:24,6:15:23.33:0,23,141	1/1:5,1:1:3.01:47,3,0	0/1:29,6:29:99:112,0,241	0/0:29,0:18:26.23:0,26,149	0/0:10,1:10:14.76:0,15,70	0/1:30,6:30:99:156,0,240	0/1:25,4:22:43:43,0,224	0/1:27,5:24:99:106,0,205	0/0:40,3:30:0.53:0,1,260	0/1:18,1:12:23.66:24,0,142	0/1:7,6:11:9.43:151,0,9	0/1:25,5:22:44.51:190,0,45	0/0:10,1:2:5.90:0,6,37	0/0:17,2:16:9.65:0,10,65	0/0:50,12:39:16.66:0,17,176	0/1:21,5:19:3.49:3,0,26	0/1:10,3:10:15.13:25,0,15	0/1:16,3:17:40.37:40,0,46	0/1:15,0:13:37.80:70,0,38	0/0:25,0:21:23.61:0,24,211	0/1:20,0:16:41.68:42,0,129	0/1:5,1:4:9.98:86,0,10
chr10	25660529	.	G	GGAT	2127.39	PASS	AB=0.977;AC=21;AF=0.375;AN=56;BaseQRankSum=-1.721;DP=662;FS=28.466;HRun=0;HaplotypeScore=190.9117;InbreedingCoeff=-0.5175;MQ=25.49;MQ0=81;MQRankSum=0.481;QD=4.21;ReadPosRankSum=-1.643;VQSLOD=1.2885;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:20,0:11:18.63:19,0,83	0/1:6,1:4:59.06:59,0,69	0/0:22,0:1:2.99:0,3,23	0/0:23,0:2:2.37:0,2,8	1/1:14,2:12:9.33:173,9,0	0/0:7,0:5:6.02:0,6,87	0/1:34,0:12:33.88:70,0,34	0/0:12,0:2:3.01:0,3,43	0/1:28,0:22:75.18:75,0,251	0/1:38,0:25:99:151,0,438	0/0:15,1:14:6.48:0,6,71	0/1:33,1:24:99:218,0,257	0/1:25,0:19:99:119,0,284	0/1:33,1:20:64.52:65,0,293	0/0:41,0:26:21.04:0,21,321	0/1:22,0:16:62.38:62,0,206	0/1:18,0:15:99:103,0,199	0/1:27,0:19:55.36:55,0,314	0/0:17,0:5:6.49:0,6,92	0/1:22,0:18:29.26:160,0,29	0/1:66,0:35:99:103,0,142	0/1:21,4:21:31.88:137,0,32	0/1:13,1:10:4.46:104,0,4	0/0:19,0:14:2.61:0,3,151	0/1:20,1:16:99:256,0,134	0/1:25,0:19:99:120,0,274	0/1:21,0:15:99:114,0,131	0/1:8,0:5:9.93:117,0,10
chr10	25660558	.	ATG	A	1191.48	PASS	AB=0.902;AC=20;AF=0.400;AN=50;BaseQRankSum=7.630;DP=515;FS=3.702;HRun=0;HaplotypeScore=166.9791;InbreedingCoeff=-0.2956;MQ=25.74;MQ0=96;MQRankSum=-2.957;QD=4.04;ReadPosRankSum=-1.025;VQSLOD=2.9683;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:6,2:4:1.35:41,1,0	0/1:6,1:3:21.16:21,0,36	./.	0/0:30,0:3:2.97:0,3,20	0/0:15,3:11:8.78:0,9,169	./.	0/0:17,3:7:6:0,6,112	./.	0/1:18,2:16:99:160,0,150	0/1:19,2:16:62.74:63,0,280	0/0:10,3:9:3.81:0,4,100	0/1:21,2:15:99:99,0,297	0/1:9,4:11:61.92:62,0,230	0/1:20,4:12:87.26:87,0,174	0/1:20,6:17:18.52:19,0,314	0/1:13,3:11:54.02:54,0,106	0/1:13,2:12:6.92:151,0,7	1/1:10,7:13:22.15:335,22,0	0/0:13,0:3:3.01:0,3,48	0/1:19,1:17:5.22:5,0,210	0/0:41,9:24:3.58:0,4,161	0/0:22,1:17:8.50:0,8,161	0/1:13,1:8:46:53,0,46	1/1:11,5:12:12.29:111,12,0	0/1:24,1:15:24.39:24,0,212	0/1:11,0:6:27.99:28,0,188	0/1:19,0:15:26.53:27,0,201	0/0:5,0:4:12.02:0,12,190
chr10	25660559	.	TGTG	T	1037.89	PASS	AB=0.964;AC=19;AF=0.380;AN=50;BaseQRankSum=7.844;DP=507;FS=5.942;HRun=0;HaplotypeScore=169.5265;InbreedingCoeff=-0.1296;MQ=25.92;MQ0=91;MQRankSum=-2.861;QD=3.96;ReadPosRankSum=0.666;VQSLOD=1.6971;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:8,0:4:2.81:34,3,0	0/0:8,0:4:4.17:0,4,47	./.	0/0:31,0:3:5.93:0,6,40	0/0:18,0:11:9.03:0,9,213	./.	0/0:16,1:7:6.02:0,6,141	./.	0/1:17,3:16:99:109,0,200	0/1:20,1:16:19.74:20,0,329	0/0:13,0:9:4.28:0,4,136	0/1:22,2:16:84.82:85,0,324	0/1:13,0:11:72.51:73,0,268	0/1:22,1:11:99:210,0,220	0/1:26,0:17:18.71:19,0,396	0/1:15,1:11:99:176,0,151	1/1:11,3:11:16.22:140,16,0	1/1:15,2:13:18.07:142,18,0	0/0:9,1:2:3.01:0,3,42	0/1:19,1:17:5.77:6,0,299	0/0:39,8:24:7.79:0,8,212	0/0:21,0:16:17.70:0,18,263	0/1:15,0:9:12.98:13,0,63	1/1:13,3:12:1.82:75,2,0	0/0:25,0:16:0.98:0,1,297	0/1:10,0:5:29.92:30,0,210	0/1:18,0:15:57.78:58,0,196	0/0:5,0:4:12.04:0,12,251
chr10	25660560	.	G	GA	1208.41	PASS	AB=0.830;AC=19;AF=0.380;AN=50;BaseQRankSum=7.329;DP=489;FS=7.916;HRun=0;HaplotypeScore=166.5773;InbreedingCoeff=-0.0845;MQ=26.22;MQ0=89;MQRankSum=-2.050;QD=4.89;ReadPosRankSum=0.288;VQSLOD=2.4543;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,4:5:6.44:54,6,0	0/0:8,0:4:4.25:0,4,63	./.	0/0:31,0:3:2.97:0,3,20	0/0:17,0:11:7.64:0,8,124	./.	0/0:11,4:6:6.01:0,6,84	./.	0/1:14,2:15:99:114,0,108	0/1:18,1:15:11.80:12,0,261	0/0:12,0:8:3.41:0,3,79	0/1:17,3:15:96.45:96,0,242	0/1:9,2:9:73.22:73,0,178	0/1:14,8:11:99:226,0,136	0/1:19,6:17:54.03:54,0,224	0/1:9,4:11:62.16:225,0,62	1/1:6,3:10:17.74:174,18,0	1/1:9,4:11:19.11:130,19,0	0/0:8,0:2:3.01:0,3,42	0/1:19,1:17:2.59:3,0,187	0/0:33,11:25:9.11:0,9,127	0/0:21,0:16:11.97:0,12,166	0/1:14,0:9:12.66:13,0,35	1/1:9,2:11:3.51:61,4,0	0/0:27,0:18:8.30:0,8,179	0/1:8,2:5:29.18:29,0,152	0/1:12,4:14:97.50:97,0,137	0/0:5,0:4:12.04:0,12,167
chr10	25660561	.	TG	T	69.18	PASS	AB=0.927;AC=8;AF=0.160;AN=50;BaseQRankSum=5.210;DP=489;FS=5.852;HRun=2;HaplotypeScore=172.4775;InbreedingCoeff=0.0692;MQ=26.39;MQ0=85;MQRankSum=-2.803;QD=0.65;ReadPosRankSum=0.293;VQSLOD=-0.7570;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:5:4.23:0,4,45	0/0:9,0:4:2.95:0,3,42	./.	0/0:31,0:3:2.97:0,3,20	0/0:17,1:11:9.03:0,9,135	./.	0/0:17,0:6:5.99:0,6,90	./.	0/1:16,1:14:32.45:32,0,162	0/1:16,4:16:90.85:91,0,242	0/0:12,0:8:6.02:0,6,90	0/0:22,0:15:18.98:0,19,313	0/0:11,0:9:3.11:0,3,164	0/0:22,1:11:4.38:0,4,188	0/0:26,0:18:23.05:0,23,298	0/0:15,0:11:13.62:0,14,164	0/1:13,0:10:3.78:4,0,36	1/1:15,0:11:4.12:27,4,0	0/0:7,0:2:3.01:0,3,44	0/0:20,1:18:11.79:0,12,180	0/0:47,0:25:9.42:0,9,137	0/0:21,0:16:17.96:0,18,209	0/0:15,0:9:1.98:0,2,43	1/1:14,0:11:2.36:7,2,0	0/1:25,2:18:21.31:21,0,182	0/0:9,0:5:10.53:0,11,169	0/0:18,0:14:16.22:0,16,211	0/0:5,0:4:12.04:0,12,177
chr10	25660580	.	ATG	A	1183.11	PASS	AB=0.831;AC=22;AF=0.423;AN=52;BaseQRankSum=8.202;DP=418;FS=5.109;HRun=0;HaplotypeScore=153.5937;InbreedingCoeff=-0.2701;MQ=37.69;MQ0=50;MQRankSum=-4.428;QD=4.35;ReadPosRankSum=2.249;VQSLOD=2.6995;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:5,1:5:2.98:0,3,44	1/1:6,3:4:2.92:44,3,0	0/0:39,2:9:24.01:0,24,311	0/1:33,4:10:13.56:14,0,396	0/0:11,3:9:8.54:0,9,168	./.	0/0:14,2:6:2.05:0,2,46	0/1:5,0:4:8.15:16,0,8	0/1:10,2:10:99:118,0,128	0/1:11,4:13:99:146,0,250	0/0:10,1:6:5.97:0,6,84	0/1:12,6:14:87.60:141,0,88	0/1:5,6:8:99:103,0,131	0/1:13,6:9:99:158,0,115	0/1:26,1:21:71.30:71,0,432	0/1:11,2:10:99:148,0,139	1/1:9,3:9:10.41:54,10,0	1/1:7,3:7:6.48:51,6,0	./.	0/1:13,4:14:28.16:28,0,144	0/0:26,8:21:7.89:0,8,150	0/0:15,1:13:12.61:0,13,172	0/1:8,3:6:8.02:8,0,90	1/1:9,3:9:2.31:34,2,0	0/1:20,3:16:32.04:32,0,176	0/1:6,1:4:33.50:34,0,88	0/1:9,5:11:49.28:135,0,49	0/0:5,0:4:3.01:0,3,37
chr10	25660581	.	TGTG	T	397.62	PASS	AB=0.979;AC=17;AF=0.327;AN=52;BaseQRankSum=7.773;DP=412;FS=16.243;HRun=0;HaplotypeScore=157.0988;InbreedingCoeff=0.0064;MQ=37.93;MQ0=47;MQRankSum=-4.102;QD=2.26;ReadPosRankSum=1.796;VQSLOD=1.8231;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:5:3:0,3,38	1/1:9,0:4:2.79:15,3,0	0/0:42,0:10:22.79:0,23,450	0/0:36,2:12:20.97:0,21,628	0/0:14,0:9:8.99:0,9,212	./.	0/0:12,0:6:3.48:0,3,37	0/0:5,0:4:11.39:0,11,68	0/1:10,1:10:99:152,0,169	0/0:15,0:13:1.10:0,1,375	0/0:11,0:6:2.53:0,3,70	0/1:15,1:13:78.40:83,0,78	0/1:11,0:8:67.44:67,0,180	0/1:18,1:9:71.69:72,0,138	0/1:21,0:20:3.16:3,0,548	0/1:10,0:9:28.31:28,0,187	1/1:10,1:9:10.54:58,11,0	1/1:10,0:7:0.74:28,1,0	./.	0/1:16,0:14:1.37:1,0,160	0/0:28,5:21:7.66:0,8,143	0/0:16,0:13:18:0,18,243	0/0:11,0:6:8.86:0,9,142	1/1:11,1:9:3.61:17,4,0	0/0:22,0:15:13.93:0,14,204	0/1:7,0:4:5.26:5,0,143	0/1:12,0:11:8.04:8,0,101	0/0:5,0:4:3.01:0,3,36
chr10	25660582	.	G	GA	773.70	PASS	AB=0.854;AC=16;AF=0.308;AN=52;BaseQRankSum=5.836;DP=396;FS=6.234;HRun=0;HaplotypeScore=134.2959;InbreedingCoeff=0.0772;MQ=38.24;MQ0=44;MQRankSum=-3.179;QD=4.96;ReadPosRankSum=-0.940;VQSLOD=2.5427;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:2,2:3:2.83:0,3,42	0/0:8,0:3:1.82:0,2,5	0/0:43,1:10:26.82:0,27,282	0/0:38,1:12:29.76:0,30,388	0/0:13,0:9:8.84:0,9,126	./.	0/0:8,3:4:2.98:0,3,36	1/1:1,4:4:12.04:191,12,0	0/1:10,2:10:75.40:79,0,75	0/0:12,0:12:18.15:0,18,231	0/0:11,0:6:3.29:0,3,73	0/1:12,3:12:77.43:77,0,80	0/1:10,0:8:42.50:55,0,42	0/1:14,3:9:82.42:127,0,82	0/1:21,3:19:7.49:7,0,338	0/1:6,6:9:40.07:147,0,40	1/1:6,2:6:8.86:100,9,0	1/1:3,2:5:6.02:68,6,0	./.	0/1:16,1:15:0.02:0,0,137	0/0:22,8:21:4.59:0,5,117	0/0:15,0:12:14.85:0,15,143	0/0:12,0:7:4.53:0,5,81	1/1:6,3:8:0.20:42,0,0	0/0:20,0:14:22.99:0,23,226	0/0:6,0:4:10.49:0,10,85	0/1:13,1:11:26.77:27,0,45	0/0:5,0:4:3.01:0,3,36
chr10	25660588	.	GGAT	G	738.72	PASS	AB=0.958;AC=27;AF=0.519;AN=52;BaseQRankSum=3.069;DP=375;FS=18.801;HRun=0;HaplotypeScore=129.9605;InbreedingCoeff=-0.0800;MQ=44.67;MQ0=31;MQRankSum=-1.892;QD=2.81;ReadPosRankSum=0.976;VQSLOD=1.2536;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:2,1:2:3.01:49,3,0	1/1:6,0:2:2.90:16,3,0	0/0:43,1:13:39.09:0,39,724	0/0:41,0:17:45.10:0,45,796	0/1:14,0:9:0.04:0,0,0	0/1:1,0:1:0:0,0,0	1/1:9,1:4:3.44:21,3,0	0/0:5,0:4:12.04:0,12,267	0/1:8,3:9:73.66:143,0,74	0/1:12,0:11:67.61:68,0,78	1/1:12,0:7:2.97:43,3,0	0/1:14,0:11:23.13:115,0,23	0/1:11,0:8:40.86:41,0,81	0/1:18,0:9:26.28:26,0,50	0/1:22,2:19:56.95:57,0,181	0/1:11,1:9:26.80:27,0,128	1/1:8,1:6:6.20:35,6,0	0/0:7,1:5:2.87:0,3,15	./.	0/1:18,0:16:0.41:60,0,0	0/1:30,1:18:0.47:1,0,0	0/1:10,0:9:35.89:36,0,40	0/0:10,0:6:2.05:0,2,65	0/1:8,2:8:0.08:1,0,0	1/1:18,0:11:10.50:52,10,0	0/1:5,0:3:5.14:21,0,5	0/1:13,1:11:31.10:67,0,31	./.
chr10	25660591	.	T	TG	1739.64	PASS	AB=0.779;AC=31;AF=0.574;AN=54;BaseQRankSum=1.259;DP=351;FS=28.842;HRun=1;HaplotypeScore=119.3174;InbreedingCoeff=0.1299;MQ=45.66;MQ0=23;MQRankSum=-4.901;QD=7.16;ReadPosRankSum=2.924;VQSLOD=-0.7266;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:3,0:2:0.89:0,1,2	0/0:1,0:3:2.22:0,2,7	0/0:43,0:14:42.09:0,42,507	0/0:40,0:19:48.20:0,48,554	0/1:3,2:7:0.19:0,0,0	0/1:0,0:1:0:0,0,0	1/1:4,2:1:2.97:20,3,0	0/0:4,0:4:12.04:0,12,156	0/1:7,0:9:18.71:175,0,19	1/1:3,1:11:22.99:210,23,0	1/1:2,3:6:2.97:43,3,0	0/1:4,2:10:35.55:117,0,36	0/1:4,0:8:42.78:89,0,43	0/1:7,0:8:29.08:62,0,29	1/1:8,16:19:21.66:403,22,0	0/1:7,0:8:47.38:91,0,47	1/1:7,2:6:6.02:76,6,0	0/0:5,1:3:3:0,3,29	./.	1/1:4,4:15:0.71:126,1,0	0/1:25,2:17:0.14:0,0,1	1/1:1,3:8:12.01:141,12,0	0/1:3,0:5:32.40:40,0,32	1/1:9,1:8:0.43:1,0,0	1/1:0,4:11:11.99:135,12,0	1/1:1,0:3:2.10:52,2,0	0/1:3,5:11:26.86:104,0,27	0/1:1,0:1:0:0,0,0
chr10	25660607	.	GATA	G	995.01	PASS	AB=0.757;AC=23;AF=0.460;AN=50;BaseQRankSum=5.882;DP=282;FS=16.769;HRun=0;HaplotypeScore=107.6095;InbreedingCoeff=-0.1066;MQ=49.58;MQ0=19;MQRankSum=-3.687;QD=6.68;ReadPosRankSum=2.893;VQSLOD=1.7740;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:2,0:1:3.01:0,3,74	0/1:6,3:4:15.90:47,0,16	0/0:39,0:14:38.93:0,39,668	0/0:42,0:22:65.26:0,65,1024	0/1:6,2:3:0.04:0,0,0	1/1:0,1:1:3.01:30,3,0	0/0:1,1:2:2.94:0,3,32	0/0:8,0:7:21.03:0,21,305	0/1:6,1:6:34.62:35,0,113	0/1:4,3:6:99:99,0,168	1/1:4,3:4:2.88:15,3,0	1/1:3,6:7:1.32:201,1,0	0/1:4,3:6:76.78:77,0,121	0/1:7,6:8:93.59:137,0,94	0/1:22,2:19:38.77:39,0,674	0/1:5,2:6:81.88:82,0,143	0/0:7,1:5:2.48:0,2,18	./.	./.	0/1:12,4:13:10.47:64,0,10	0/0:20,1:13:2.18:0,2,12	0/0:6,1:5:8.71:0,9,132	0/1:3,2:4:13.88:14,0,52	1/1:4,0:5:0.94:3,1,0	1/1:10,4:8:1.85:75,2,0	0/1:1,2:3:56.27:101,0,56	1/1:2,4:5:8.52:118,9,0	./.
chr10	25660610	.	A	AGAT	296.97	PASS	AB=0.994;AC=9;AF=0.188;AN=48;BaseQRankSum=1.546;DP=280;FS=2.907;HRun=0;HaplotypeScore=110.3468;InbreedingCoeff=0.0517;MQ=47.37;MQ0=18;MQRankSum=-1.786;QD=3.71;ReadPosRankSum=-1.266;VQSLOD=2.3440;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:2,0:1:3.01:0,3,49	0/0:7,0:4:5.93:0,6,44	0/0:40,0:15:22.85:0,23,316	0/0:40,0:21:44.97:0,45,621	0/1:7,0:3:0.09:0,0,0	0/0:1,0:1:2.74:0,3,12	0/0:2,0:2:2.50:0,2,9	1/1:4,4:8:12.04:239,12,0	0/1:7,0:6:7.52:8,0,43	0/1:7,0:6:9.82:10,0,107	./.	0/0:9,0:7:11.24:0,11,63	0/1:7,0:6:38.83:39,0,39	0/1:14,0:9:61.01:95,0,61	0/1:22,0:18:10.76:11,0,99	0/0:7,0:6:12.55:0,13,51	0/0:8,0:5:3.01:0,3,41	./.	./.	0/0:16,0:13:8.94:0,9,48	0/0:20,0:13:0.47:0,0,1	0/0:7,0:5:7.69:0,8,29	0/0:5,0:4:3.63:0,4,10	0/0:6,0:5:0.47:0,0,1	0/0:13,0:7:7.05:0,7,40	0/0:3,0:3:8.36:0,8,49	0/1:6,0:5:12.20:15,0,12	./.
chr10	25660618	.	G	GGATA	1007.93	PASS	AB=1.000;AC=22;AF=0.440;AN=50;BaseQRankSum=0.340;DP=251;FS=8.323;HRun=0;HaplotypeScore=107.5612;InbreedingCoeff=-0.0997;MQ=37.22;MQ0=19;MQRankSum=-1.232;QD=6.59;ReadPosRankSum=4.463;VQSLOD=1.5650;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:2,0:1:3.01:0,3,57	0/0:7,0:3:6.06:0,6,28	0/0:31,0:10:8.44:0,8,247	0/0:35,0:19:30.54:0,31,420	0/1:6,0:3:0.08:0,0,0	1/1:1,0:1:2.60:10,3,0	0/1:2,0:2:11.03:11,0,13	0/1:6,0:4:10.94:14,0,11	0/1:5,0:4:23.05:43,0,23	0/1:8,0:6:22.78:48,0,23	0/0:7,0:5:1.55:0,2,4	0/1:10,0:8:10.51:11,0,35	0/1:7,0:6:25.33:37,0,25	0/1:14,0:10:35.38:35,0,64	1/1:13,10:18:43.97:744,44,0	0/1:6,0:5:6.35:25,0,6	0/0:7,0:4:1.25:0,1,3	./.	./.	0/1:16,0:13:8.78:38,0,9	0/1:18,0:13:0.13:0,0,1	1/1:7,0:5:8.60:48,9,0	0/1:5,0:4:6.22:6,0,29	0/0:4,0:4:1.36:0,1,3	1/1:10,0:7:5.25:31,5,0	0/1:3,0:3:7.05:9,0,7	0/1:6,0:5:5.39:35,0,5	./.
chr10	25660725	.	T	TG	257.38	PASS	AB=0.774;AC=11;AF=0.306;AN=36;BaseQRankSum=3.013;DP=101;FS=0.000;HRun=1;HaplotypeScore=44.1081;InbreedingCoeff=0.0152;MQ=19.16;MQ0=19;MQRankSum=2.676;QD=7.35;ReadPosRankSum=1.665;VQSLOD=0.6354;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:5:5.23:0,5,46	./.	0/0:10,0:2:5.98:0,6,59	0/0:11,0:3:9.03:0,9,117	0/0:1,0:1:0:0,0,0	0/0:3,0:2:3.01:0,3,39	./.	0/0:7,0:2:6.02:0,6,78	0/1:6,1:4:2.38:2,0,34	0/0:4,0:1:3.01:0,3,39	./.	0/1:4,1:6:62.29:101,0,62	1/1:1,1:1:3.01:45,3,0	0/1:5,1:3:32.82:38,0,33	0/0:7,0:1:3.01:0,3,39	0/1:3,3:4:29.65:54,0,30	0/0:4,0:4:4.88:0,5,38	0/1:2,1:3:32.89:35,0,33	./.	./.	./.	./.	./.	1/1:1,1:3:6.02:85,6,0	./.	./.	1/1:1,0:1:2.37:8,2,0	0/0:1,0:1:3.01:0,3,39
chr10	25660736	.	T	TG	137.06	PASS	AB=0.867;AC=12;AF=0.353;AN=34;BaseQRankSum=2.266;DP=103;FS=0.000;HRun=1;HaplotypeScore=46.2992;InbreedingCoeff=0.0717;MQ=19.71;MQ0=14;MQRankSum=-0.418;QD=3.51;ReadPosRankSum=1.650;VQSLOD=-0.0001;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:5,0:5:14.77:15,0,33	./.	0/0:6,0:2:3.01:0,3,33	./.	0/0:1,0:1:0:0,0,0	0/0:3,0:2:3.01:0,3,39	./.	0/0:6,0:2:6.02:0,6,78	0/0:5,1:3:4.26:0,4,43	./.	./.	0/0:7,0:7:8.78:0,9,142	0/0:2,0:1:3.01:0,3,34	0/1:5,2:3:32.86:38,0,33	1/1:10,0:2:2.37:8,2,0	0/1:5,1:3:32.87:35,0,33	0/0:3,1:4:4.88:0,5,44	0/1:4,1:5:32.73:35,0,33	./.	1/1:1,0:1:2.37:8,2,0	./.	./.	./.	1/1:2,1:3:6.01:72,6,0	./.	./.	1/1:2,0:1:3.01:38,3,0	0/0:2,0:2:5.69:0,6,49
chr10	25660763	.	T	TG	366.63	PASS	AB=0.827;AC=21;AF=0.457;AN=46;BaseQRankSum=2.187;DP=193;FS=0.000;HRun=1;HaplotypeScore=53.5487;InbreedingCoeff=0.0266;MQ=20.33;MQ0=37;MQRankSum=-1.685;QD=3.08;ReadPosRankSum=1.810;VQSLOD=-0.3762;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,0:5:0.02:23,0,0	1/1:2,1:3:3.01:42,3,0	./.	./.	0/0:2,1:3:3:0,3,26	./.	./.	0/0:14,0:7:21.07:0,21,266	0/1:10,2:7:60.40:64,0,60	0/0:10,0:4:5.85:0,6,53	0/0:2,0:1:0:0,0,0	0/0:8,0:8:7.03:0,7,220	0/1:3,1:3:32.24:32,0,53	0/1:8,0:3:9.25:9,0,33	0/1:20,1:10:31.25:31,0,98	0/1:8,1:3:18.32:18,0,33	0/1:2,0:4:28.34:61,0,28	1/1:4,2:6:9:111,9,0	1/1:9,0:2:2.84:14,3,0	1/1:8,0:2:0.47:1,0,0	1/1:4,1:2:3:25,3,0	0/0:5,3:3:0:0,0,0	./.	1/1:3,1:4:5.83:34,6,0	0/0:4,1:2:0.89:0,1,2	0/1:10,2:8:32.85:33,0,101	0/0:3,0:1:3.01:0,3,36	0/0:4,0:3:8.51:0,9,87
chr10	25660771	.	GGAT	G	296.14	PASS	AB=0.901;AC=15;AF=0.326;AN=46;BaseQRankSum=-0.183;DP=234;FS=1.124;HRun=0;HaplotypeScore=55.5766;InbreedingCoeff=-0.0036;MQ=19.83;MQ0=59;MQRankSum=-1.385;QD=2.69;ReadPosRankSum=-0.588;VQSLOD=1.3688;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:5:2.82:0,3,35	0/0:4,0:4:8.10:0,8,47	./.	./.	0/0:4,0:3:3.01:0,3,33	./.	./.	0/0:17,1:8:23.39:0,23,285	0/1:12,2:7:11.72:12,0,132	0/1:14,1:4:53.61:54,0,58	0/1:3,0:2:0:0,0,0	0/0:8,0:8:6.45:0,6,251	0/1:4,1:3:39.42:39,0,47	0/0:12,0:3:6.01:0,6,95	0/1:19,5:11:99:168,0,100	0/0:9,1:3:0.99:0,1,3	0/1:4,1:4:12.72:13,0,42	0/0:8,0:7:14.94:0,15,218	1/1:9,0:1:2.84:14,3,0	0/1:9,0:2:0:0,0,0	1/1:9,0:5:5.20:29,5,0	0/0:10,0:3:2.74:0,3,12	./.	0/0:5,0:4:4.49:0,4,31	0/1:9,0:5:21.27:40,0,21	0/0:15,0:8:14:0,14,205	1/1:3,0:1:2.84:14,3,0	0/1:3,1:3:41.92:42,0,50
chr10	25660786	.	GGATGGAT	G	347.78	PASS	AB=0.974;AC=14;AF=0.318;AN=44;BaseQRankSum=-1.088;DP=307;FS=2.305;HRun=0;HaplotypeScore=75.7758;InbreedingCoeff=-0.0708;MQ=19.82;MQ0=80;MQRankSum=0.391;QD=2.70;ReadPosRankSum=-0.283;VQSLOD=1.2177;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:7,0:5:0.68:1,0,30	0/0:4,0:4:2.68:0,3,11	./.	./.	0/0:6,0:4:3:0,3,48	./.	./.	0/1:20,7:12:99:276,0,131	0/1:14,0:7:19.49:19,0,143	0/0:24,0:4:5.12:0,5,28	./.	0/1:10,0:10:17.34:17,0,163	0/0:4,0:2:5.94:0,6,41	0/0:13,0:4:3.01:0,3,49	0/0:35,0:20:29.22:0,29,633	0/0:10,0:3:3:0,3,29	0/1:9,0:7:31.67:47,0,32	0/0:8,0:7:14.94:0,15,217	1/1:10,0:3:0.47:1,0,0	0/0:11,0:3:2.99:0,3,28	1/1:8,0:5:4.41:16,4,0	0/1:11,0:4:0:0,0,0	./.	0/0:5,0:4:2.81:0,3,15	0/0:12,0:5:0.34:0,0,7	0/1:24,0:13:20.67:21,0,155	1/1:3,0:1:2.99:23,3,0	0/1:5,0:3:14.56:42,0,15
chr10	25660801	.	GGAT	G	115.70	PASS	AB=0.983;AC=12;AF=0.300;AN=40;BaseQRankSum=4.388;DP=283;FS=29.776;HRun=0;HaplotypeScore=59.9711;InbreedingCoeff=-0.0083;MQ=19.27;MQ0=79;MQRankSum=-0.627;QD=1.26;ReadPosRankSum=-0.045;VQSLOD=-0.3150;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:4,0:3:0:0,0,0	0/0:2,0:2:3:0,3,29	./.	./.	./.	./.	./.	0/0:24,0:11:16.98:0,17,257	0/1:15,1:6:58.26:83,0,58	0/0:25,0:4:2.67:0,3,30	./.	0/1:11,1:10:37.86:38,0,128	0/1:4,0:2:1.15:1,0,33	./.	0/0:34,0:19:40.10:0,40,784	1/1:7,1:3:2.98:49,3,0	0/1:7,0:5:21.02:22,0,21	0/1:7,0:6:2.40:2,0,30	0/0:6,0:2:3.01:0,3,30	0/0:9,0:3:2.93:0,3,18	1/1:8,0:4:4.40:18,4,0	0/0:9,0:4:2.97:0,3,20	0/0:5,0:1:3.01:0,3,66	0/1:2,0:1:0:0,0,0	0/0:12,0:6:6.02:0,6,79	0/1:23,0:11:9.53:10,0,160	./.	0/0:4,0:3:4.24:0,4,27
chr10	25660836	.	AC	A	582.92	PASS	AB=0.583;AC=26;AF=0.813;AN=32;BaseQRankSum=-0.217;DP=72;FS=8.062;HRun=1;HaplotypeScore=35.9471;InbreedingCoeff=0.2948;MQ=37.34;MQ0=6;MQRankSum=-1.733;QD=9.88;ReadPosRankSum=0.217;VQSLOD=0.6675;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,1:1:2.99:23,3,0	./.	./.	0/0:1,0:1:2.88:0,3,15	./.	1/1:0,1:1:2.98:22,3,0	1/1:2,2:2:2.98:22,3,0	./.	1/1:3,1:1:3.01:41,3,0	./.	./.	1/1:4,4:6:14.93:127,15,0	./.	1/1:2,5:4:5.97:44,6,0	1/1:9,6:9:21.96:101,22,0	1/1:2,3:2:2.98:22,3,0	1/1:3,1:4:8.76:85,9,0	1/1:1,2:3:8.23:76,8,0	1/1:0,1:1:3.01:38,3,0	./.	0/0:1,1:1:0:0,0,0	0/1:1,1:1:0:0,0,0	./.	0/1:0,1:1:0:0,0,0	./.	1/1:2,1:3:8.26:65,8,0	./.	./.
chr10	25660846	.	TG	T	136.07	PASS	AB=0.826;AC=8;AF=0.211;AN=38;BaseQRankSum=-1.591;DP=144;FS=1.985;HRun=2;HaplotypeScore=47.8841;InbreedingCoeff=-0.0060;MQ=31.26;MQ0=23;MQRankSum=0.985;QD=4.54;ReadPosRankSum=-1.742;VQSLOD=0.0434;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:2,0:2:6.02:0,6,87	./.	./.	0/0:6,0:1:3.01:0,3,43	./.	0/0:2,0:1:3.01:0,3,42	0/0:3,2:3:3.01:0,3,35	0/0:5,0:2:5.97:0,6,48	0/1:6,2:4:58.15:58,0,65	0/1:3,1:4:32.51:33,0,34	./.	0/0:8,0:6:15.05:0,15,209	./.	0/0:8,1:5:9.03:0,9,134	0/0:25,0:16:36.01:0,36,396	0/0:6,0:3:5.98:0,6,65	0/0:6,0:6:4.85:0,5,58	0/1:2,0:2:12.73:13,0,39	0/0:9,0:4:3.01:0,3,45	1/1:1,1:2:3.01:38,3,0	0/1:4,4:8:1.79:34,0,2	./.	./.	0/1:1,0:1:0:0,0,0	./.	0/0:3,0:2:2.49:0,2,5	./.	0/1:2,2:4:25.54:67,0,26
chr10	25660850	.	TG	T	144.55	PASS	AB=0.796;AC=7;AF=0.167;AN=42;BaseQRankSum=1.711;DP=191;FS=0.000;HRun=2;HaplotypeScore=59.4901;InbreedingCoeff=0.0371;MQ=31.08;MQ0=30;MQRankSum=-2.304;QD=4.38;ReadPosRankSum=-1.904;VQSLOD=-0.3096;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:2,0:2:6.02:0,6,71	./.	./.	0/0:7,0:1:3.01:0,3,31	./.	0/0:3,0:1:3.01:0,3,40	0/0:9,0:6:9.03:0,9,124	0/1:4,3:4:32.43:98,0,32	0/0:9,0:4:11.27:0,11,102	0/0:6,0:5:8.99:0,9,107	./.	0/0:11,0:9:19.85:0,20,251	0/0:4,0:3:3:0,3,25	0/0:10,0:5:12.04:0,12,153	0/0:29,0:20:48.07:0,48,569	0/0:9,0:6:9.03:0,9,123	0/1:7,1:8:41.96:72,0,42	0/0:5,0:5:15:0,15,177	0/0:9,0:4:3.01:0,3,41	0/0:2,0:2:5.78:0,6,31	0/0:13,0:10:5.84:0,6,76	1/1:5,0:2:1.25:3,1,0	1/1:4,1:3:1.25:3,1,0	./.	./.	0/1:6,2:5:50.05:66,0,50	./.	0/0:5,1:5:7.59:0,8,58
chr10	25660876	.	ATG	A	249.20	PASS	AB=0.851;AC=9;AF=0.173;AN=52;BaseQRankSum=4.475;DP=306;FS=7.386;HRun=0;HaplotypeScore=65.2155;InbreedingCoeff=-0.2847;MQ=30.22;MQ0=55;MQRankSum=-1.914;QD=1.86;ReadPosRankSum=-0.480;VQSLOD=0.5066;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:3,0:3:7.05:0,7,38	0/0:2,0:2:6.02:0,6,112	0/0:21,1:2:3.01:0,3,48	0/0:21,1:4:11.06:0,11,106	./.	0/1:8,0:4:3.70:4,0,57	0/1:18,3:16:5.94:6,0,592	0/1:19,2:14:65.84:66,0,515	0/1:11,2:5:10.44:10,0,133	0/1:13,3:12:57.89:58,0,381	0/0:2,0:2:3.01:0,3,56	0/1:8,4:8:71.92:72,0,116	0/0:7,0:7:21.07:0,21,366	0/0:10,0:4:3.66:0,4,35	0/0:26,0:20:47.90:0,48,852	0/0:9,1:5:8.52:0,9,121	0/1:9,2:10:65.13:65,0,150	0/0:4,0:3:9.03:0,9,168	0/0:11,2:3:5.51:0,6,57	0/0:5,0:4:3.90:0,4,58	0/1:20,6:20:35.45:35,0,104	0/0:6,1:3:5.51:0,6,65	0/0:7,2:4:2.50:0,2,9	0/0:3,0:2:3.01:0,3,56	./.	0/0:11,2:9:10.80:0,11,318	0/0:3,0:1:3.01:0,3,56	0/1:4,2:5:55.96:56,0,145
chr10	25660898	.	ATG	A	244.35	PASS	AB=0.848;AC=14;AF=0.269;AN=52;BaseQRankSum=6.644;DP=337;FS=18.680;HRun=0;HaplotypeScore=80.1687;InbreedingCoeff=-0.2062;MQ=34.33;MQ0=35;MQRankSum=-2.143;QD=2.18;ReadPosRankSum=-2.067;VQSLOD=-0.0716;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:4:7.75:0,8,36	0/0:2,0:2:6.02:0,6,78	0/0:37,0:16:42.12:0,42,621	0/0:26,0:7:17.99:0,18,257	./.	0/1:6,2:4:15.31:15,0,41	0/0:20,2:16:6.31:0,6,531	0/0:35,0:30:74.05:0,74,1266	0/1:12,0:5:1.33:1,0,114	0/1:12,3:11:62.60:63,0,212	0/0:3,0:2:3.01:0,3,48	0/1:8,0:6:7.52:8,0,137	0/0:8,0:7:18.04:0,18,223	0/1:6,1:3:40.06:40,0,48	0/0:26,0:20:45.15:0,45,795	0/1:7,1:4:10.53:11,0,51	0/1:10,2:11:41.71:42,0,107	0/1:5,3:7:70.25:70,0,72	1/1:9,0:2:2.50:9,2,0	0/1:5,1:6:8.98:9,0,51	0/0:24,7:23:4.35:0,4,76	0/0:3,2:3:3.01:0,3,56	0/1:6,1:3:0:0,0,0	0/0:3,1:3:5.95:0,6,48	./.	0/0:14,1:9:20.96:0,21,220	0/1:2,4:4:45.06:76,0,45	0/1:5,1:5:34.50:34,0,95
chr10	25660900	.	G	GTGGA	3087.98	PASS	AB=0.798;AC=32;AF=0.667;AN=48;BaseQRankSum=-3.328;DP=346;FS=0.000;HRun=0;HaplotypeScore=80.3972;InbreedingCoeff=0.5143;MQ=34.22;MQ0=32;MQRankSum=1.163;QD=16.08;ReadPosRankSum=4.201;VQSLOD=2.8829;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:4:8.95:0,9,69	1/1:2,1:3:8.98:122,9,0	0/0:37,0:18:26.27:0,26,388	0/0:28,0:8:8.92:0,9,68	./.	0/0:4,4:4:2.84:0,3,14	1/1:14,7:16:29.91:482,30,0	0/0:34,0:29:66.18:0,66,1184	1/1:7,6:7:11.80:130,12,0	1/1:11,5:11:18.53:409,19,0	./.	1/1:4,3:5:8.96:166,9,0	1/1:4,3:8:15.05:337,15,0	0/1:6,2:4:22.42:22,0,32	0/0:25,0:19:30.10:0,30,456	1/1:3,4:4:6.02:148,6,0	0/1:11,2:12:40.90:169,0,41	1/1:4,4:7:15.01:276,15,0	1/1:5,0:1:2.50:9,2,0	1/1:8,1:8:4.11:120,4,0	1/1:25,4:25:2.67:74,3,0	./.	0/1:3,2:3:0:0,0,0	1/1:1,3:3:6.02:148,6,0	./.	1/1:6,6:9:21.07:490,21,0	0/1:5,1:4:0.22:0,0,0	1/1:3,2:5:0.90:141,1,0
chr10	25660926	.	GATA	G	2336.28	PASS	AB=0.936;AC=31;AF=0.554;AN=56;BaseQRankSum=-1.791;DP=399;FS=0.514;HRun=0;HaplotypeScore=103.7214;InbreedingCoeff=-0.3792;MQ=32.35;MQ0=7;MQRankSum=-0.893;QD=7.71;ReadPosRankSum=-5.913;VQSLOD=0.6619;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:13,2:14:25.29:25,0,235	0/1:7,0:7:44.90:163,0,45	0/0:35,0:22:48.11:0,48,933	0/0:26,0:15:41.88:0,42,835	0/1:6,0:5:0:0,0,0	0/1:7,1:5:17.31:34,0,17	0/1:17,2:14:99:195,0,186	0/0:33,1:27:56.15:0,56,1119	0/1:15,2:10:24.51:244,0,25	0/1:12,2:11:99:100,0,260	1/1:7,0:6:0.05:1,0,0	0/1:12,0:10:27.83:214,0,28	0/1:13,1:10:85.72:201,0,86	0/1:10,1:7:11.25:148,0,11	0/1:23,1:18:8.20:8,0,410	0/1:12,0:8:19.44:85,0,19	0/1:17,0:16:28.82:29,0,184	0/1:11,0:10:91.31:91,0,174	1/1:9,0:4:3.50:69,3,0	0/1:11,1:10:12.30:75,0,12	0/1:20,4:21:75.43:75,0,157	1/1:7,0:7:0.47:1,0,0	1/1:6,0:4:6.02:80,6,0	0/1:6,2:7:37.98:38,0,50	1/1:9,2:9:23.96:328,24,0	0/1:17,1:13:99:103,0,257	1/1:7,1:6:11.76:123,12,0	0/1:4,0:4:60.67:61,0,109
chr10	25660929	.	A	AGAT	613.08	PASS	AB=0.913;AC=8;AF=0.143;AN=56;BaseQRankSum=-1.368;DP=417;FS=4.750;HRun=0;HaplotypeScore=119.6008;InbreedingCoeff=0.0316;MQ=32.39;MQ0=8;MQRankSum=0.729;QD=4.87;ReadPosRankSum=2.686;VQSLOD=2.0740;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:13,0:16:99:107,0,220	0/0:8,0:8:13.10:0,13,145	0/0:32,0:21:42.14:0,42,612	0/0:28,0:16:41.96:0,42,594	0/0:6,0:5:0:0,0,0	0/0:10,0:7:5.94:0,6,43	0/0:18,0:15:28.43:0,28,276	0/1:17,14:24:99:476,0,119	0/0:17,0:10:25.11:0,25,206	0/0:17,0:13:29.51:0,30,342	0/1:7,0:6:0.03:0,0,0	0/0:13,0:11:20.33:0,20,180	0/0:17,0:13:25.52:0,26,228	0/0:12,0:8:17.16:0,17,159	0/1:26,0:19:13.95:14,0,165	0/0:13,0:9:15.03:0,15,168	0/1:13,0:16:99:112,0,107	0/1:12,0:11:15.20:15,0,198	0/0:10,0:4:7.15:0,7,38	0/0:12,0:10:8.15:0,8,56	0/0:27,0:24:9.88:0,10,249	0/1:8,0:7:0:0,0,0	0/0:6,0:4:3.84:0,4,21	0/0:11,0:10:8.95:0,9,85	0/0:11,0:9:19.56:0,20,132	0/0:18,0:13:27.07:0,27,341	0/1:8,0:6:2.09:2,0,52	0/0:4,0:4:11.87:0,12,130
chr10	25661010	.	AGATGGATGATG	A	9450.87	PASS	AB=0.991;AC=45;AF=0.804;AN=56;BaseQRankSum=-4.567;DP=575;FS=90.848;HRun=0;HaplotypeScore=188.9702;InbreedingCoeff=0.3088;MQ=37.01;MQ0=27;MQRankSum=-1.036;QD=22.03;ReadPosRankSum=2.026;VQSLOD=0.3119;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:17,1:17:2.21:274,2,0	1/1:11,3:14:25.67:763,26,0	0/0:46,0:11:22.67:0,23,221	0/0:55,0:23:43.88:0,44,708	1/1:11,1:12:2.59:26,3,0	0/1:12,0:11:22.28:164,0,22	1/1:18,2:19:27.51:395,28,0	0/1:24,0:20:27.12:27,0,453	1/1:18,1:13:13.24:348,13,0	0/1:21,1:20:54.45:361,0,54	1/1:11,2:12:13.69:242,14,0	1/1:16,2:16:7.99:398,8,0	1/1:21,0:20:29.89:765,30,0	0/1:16,0:13:27.91:110,0,28	0/0:45,0:37:62.43:0,62,2151	1/1:24,2:22:42.84:1206,43,0	0/1:12,0:24:99:141,0,1036	1/1:6,1:7:11.41:199,11,0	1/1:7,2:7:7.13:211,7,0	1/1:13,7:18:20.10:399,20,0	1/1:31,0:28:38.18:521,38,0	1/1:18,2:19:22.03:314,22,0	1/1:8,0:7:8.94:154,9,0	1/1:13,0:13:8.23:175,8,0	1/1:13,6:17:6.11:845,6,0	1/1:21,3:20:36.08:818,36,0	1/1:6,1:6:7.98:186,8,0	1/1:5,0:5:12.04:409,12,0
chr10	25661011	.	GATGGAT	G	3186.18	PASS	AB=0.985;AC=23;AF=0.411;AN=56;BaseQRankSum=6.464;DP=586;FS=8.039;HRun=0;HaplotypeScore=179.1733;InbreedingCoeff=-0.4214;MQ=36.90;MQ0=27;MQRankSum=0.521;QD=8.80;ReadPosRankSum=2.778;VQSLOD=2.1705;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:19,0:18:99:123,0,173	0/1:14,0:14:34.64:156,0,35	0/0:49,0:11:26.29:0,26,425	0/0:55,0:22:43.56:0,44,1164	0/0:12,0:12:5.66:0,6,52	0/1:13,0:11:51.13:73,0,51	0/1:21,0:20:99:127,0,119	0/0:29,0:21:47.88:0,48,718	0/1:19,0:13:59.01:104,0,59	0/1:23,0:20:99:124,0,304	0/1:15,0:13:16.23:62,0,16	0/1:18,0:16:30.78:154,0,31	0/1:20,1:20:56.13:319,0,56	0/1:15,1:13:36.17:153,0,36	0/0:45,0:37:74.47:0,74,2309	0/1:25,1:23:39.96:550,0,40	0/0:26,0:24:51.73:0,52,1134	0/1:7,0:7:39.94:63,0,40	0/1:9,0:7:70.08:70,0,113	0/1:20,0:18:94.17:128,0,94	0/1:30,2:29:75.06:142,0,75	1/1:19,1:19:9.87:264,10,0	0/0:8,0:7:3.43:0,3,57	0/1:13,0:13:59.92:60,0,116	0/1:19,0:17:5.04:193,0,5	0/1:24,0:20:99:211,0,107	0/1:7,0:6:54.57:64,0,55	1/1:5,0:5:12.04:211,12,0
chr10	25661014	.	GGAT	G	4189.59	PASS	AB=0.973;AC=46;AF=0.821;AN=56;BaseQRankSum=3.810;DP=586;FS=55.486;HRun=0;HaplotypeScore=160.7504;InbreedingCoeff=0.4273;MQ=36.69;MQ0=30;MQRankSum=0.784;QD=9.44;ReadPosRankSum=-1.058;VQSLOD=0.9499;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:17,1:17:19.20:155,19,0	1/1:14,0:14:26.92:232,27,0	0/0:51,0:10:10.83:0,11,199	0/0:59,0:23:22.29:0,22,593	1/1:10,0:10:2.50:25,3,0	1/1:12,0:10:11.07:92,11,0	1/1:20,0:19:31:229,31,0	0/0:31,0:22:21.22:0,21,745	1/1:14,1:10:18.96:180,19,0	0/1:24,0:21:59.92:249,0,60	1/1:13,0:11:14.38:185,14,0	1/1:14,2:14:22.17:233,22,0	1/1:19,0:18:31.41:249,31,0	1/1:14,1:13:26.60:253,27,0	0/1:48,0:40:7.48:7,0,1256	1/1:24,0:22:37.07:350,37,0	0/1:22,3:23:70.70:71,0,511	1/1:7,0:7:13.78:132,14,0	1/1:11,0:7:11.99:119,12,0	1/1:20,0:18:10.69:97,11,0	1/1:32,2:30:26.79:241,27,0	1/1:22,0:20:24.51:287,25,0	1/1:8,0:7:1.65:21,2,0	1/1:13,0:13:7.33:78,7,0	1/1:18,0:16:31.01:239,31,0	0/1:25,0:21:7.31:321,0,7	1/1:7,0:6:11.04:98,11,0	1/1:5,0:5:11.72:46,12,0
chr10	25661017	.	T	TG	5335.85	PASS	AB=0.908;AC=47;AF=0.839;AN=56;BaseQRankSum=2.115;DP=615;FS=19.110;HRun=1;HaplotypeScore=163.0920;InbreedingCoeff=0.3316;MQ=35.91;MQ0=33;MQRankSum=1.103;QD=10.59;ReadPosRankSum=0.165;VQSLOD=1.5527;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,5:18:23.27:241,23,0	1/1:9,4:13:14.74:204,15,0	0/0:54,0:8:20.60:0,21,210	0/0:56,0:19:14.33:0,14,473	1/1:9,3:13:2.21:25,2,0	1/1:6,5:9:17.85:186,18,0	1/1:12,10:21:40.40:410,40,0	0/1:36,2:25:11.20:11,0,328	1/1:8,8:11:22.08:246,22,0	0/1:21,6:23:25.28:325,0,25	1/1:9,4:11:16.94:210,17,0	1/1:8,5:12:29.10:295,29,0	1/1:11,10:20:35.16:296,35,0	1/1:10,6:14:27:318,27,0	0/1:47,2:41:5.01:5,0,747	1/1:13,12:22:45.07:470,45,0	0/1:25,0:23:35.91:179,0,36	1/1:5,2:7:17.97:194,18,0	0/1:10,3:6:0.41:76,0,0	1/1:10,9:17:11.13:97,11,0	1/1:25,17:36:16.50:241,16,0	1/1:11,11:20:19.52:294,20,0	1/1:4,4:6:9.43:78,9,0	1/1:7,7:14:13.16:99,13,0	1/1:15,6:19:21.23:253,21,0	1/1:18,7:21:4.30:339,4,0	1/1:2,3:4:5.48:115,5,0	1/1:3,4:7:14.97:128,15,0
chr10	25661020	.	TG	T	786.35	PASS	AB=0.911;AC=24;AF=0.429;AN=56;BaseQRankSum=2.990;DP=617;FS=105.550;HRun=2;HaplotypeScore=176.5043;InbreedingCoeff=-0.3118;MQ=35.31;MQ0=34;MQRankSum=-0.937;QD=2.13;ReadPosRankSum=2.172;VQSLOD=-0.2023;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:19,0:18:13.94:14,0,76	0/1:12,2:14:14.28:118,0,14	0/0:52,0:6:14.83:0,15,172	0/0:55,1:18:32.73:0,33,458	0/0:9,2:11:0:0,0,0	0/1:11,1:10:10.05:10,0,51	0/1:22,0:21:3.62:4,0,234	0/0:34,2:23:57.18:0,57,820	0/1:12,5:12:29.07:29,0,71	0/1:20,1:17:0.71:1,0,198	0/1:13,1:12:19.44:35,0,19	1/1:13,1:13:1.83:64,2,0	0/1:12,7:18:3.62:85,0,4	0/0:16,0:13:0.50:0,1,49	0/0:51,0:43:63.17:0,63,955	0/1:18,7:22:65.66:138,0,66	0/0:25,0:23:23.02:0,23,602	0/1:7,0:7:32.89:33,0,77	0/1:12,0:5:2.65:3,0,58	0/1:23,0:19:25.02:25,0,47	0/1:43,4:41:26.06:46,0,26	0/1:20,1:20:8.15:8,0,92	1/1:8,0:6:5.67:44,6,0	1/1:13,1:14:5.86:25,6,0	0/1:19,1:17:68.07:90,0,68	0/1:24,1:21:56.80:86,0,57	0/1:8,0:7:19.44:19,0,86	0/1:3,4:7:60.45:60,0,63
chr10	25661031	.	A	ATG	1329.57	PASS	AB=0.926;AC=16;AF=0.286;AN=56;BaseQRankSum=2.286;DP=656;FS=29.188;HRun=0;HaplotypeScore=192.6813;InbreedingCoeff=-0.4308;MQ=33.49;MQ0=39;MQRankSum=-2.842;QD=3.58;ReadPosRankSum=2.965;VQSLOD=1.3125;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:20:32.93:0,33,383	0/1:14,0:13:99:111,0,141	0/0:56,0:6:12.51:0,13,174	0/1:56,0:13:14.16:14,0,424	0/0:8,0:8:2.91:0,3,44	0/1:10,1:9:40.65:41,0,95	0/1:24,1:23:62.35:62,0,409	0/0:43,1:29:81.03:0,81,1126	0/1:23,0:16:17.19:17,0,280	0/1:25,4:23:99:110,0,519	0/0:11,1:10:8.47:0,8,96	0/1:16,1:16:61.37:61,0,286	0/1:18,3:20:99:170,0,319	0/0:14,0:12:29.99:0,30,356	0/0:50,0:45:0.87:0,1,867	0/1:19,4:20:99:277,0,259	0/0:25,0:23:48.51:0,49,713	0/0:8,0:7:16.16:0,16,188	0/1:18,0:7:5.35:5,0,161	0/1:26,0:22:70.21:70,0,177	0/1:42,4:39:12.20:12,0,145	0/0:25,2:25:39.04:0,39,430	0/0:10,0:8:6.02:0,6,88	0/1:14,1:15:45.52:46,0,144	0/1:15,1:14:99:183,0,119	0/1:22,1:17:99:106,0,341	0/0:10,0:9:21.07:0,21,296	0/1:3,4:7:57.65:197,0,58
chr10	25661045	.	TGATGGATG	T	138.33	PASS	AB=0.770;AC=1;AF=0.018;AN=56;BaseQRankSum=3.349;DP=810;FS=8.352;HRun=0;HaplotypeScore=299.8774;InbreedingCoeff=-0.0493;MQ=34.61;MQ0=35;MQRankSum=-1.440;QD=2.43;ReadPosRankSum=0.667;VQSLOD=0.8904;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:31:17.85:0,18,1427	0/0:14,0:13:4.98:0,5,535	0/0:60,0:12:24.92:0,25,680	0/0:58,0:17:35.47:0,35,918	0/0:15,0:15:2.77:0,3,41	0/0:9,0:8:20.96:0,21,512	0/0:29,0:31:59:0,59,1517	0/0:65,0:48:99:0,104,3037	0/0:23,0:17:8.70:0,9,811	0/0:45,0:40:84.27:0,84,2352	0/0:16,0:13:17.04:0,17,502	0/0:16,0:15:39.13:0,39,1144	0/0:20,0:18:5.71:0,6,767	0/0:20,0:18:39.36:0,39,1140	0/1:39,17:53:99:212,0,465	0/0:22,0:19:12.27:0,12,1215	0/0:34,0:31:66.96:0,67,2007	0/0:9,0:8:0.95:0,1,510	0/0:24,0:10:27.09:0,27,709	0/0:35,0:32:25.54:0,26,726	0/0:47,0:42:28.98:0,29,376	0/0:32,0:32:46.72:0,47,1474	0/0:15,0:12:14.33:0,14,240	0/0:20,0:20:24.14:0,24,269	0/0:18,0:18:21.07:0,21,410	0/0:38,0:33:71.67:0,72,1665	0/0:10,0:9:27.07:0,27,698	0/0:6,0:5:9.03:0,9,171
chr10	25661065	.	GGTA	G	361.74	PASS	AB=0.980;AC=13;AF=0.232;AN=56;BaseQRankSum=5.109;DP=804;FS=3.330;HRun=0;HaplotypeScore=257.4571;InbreedingCoeff=-0.2055;MQ=33.08;MQ0=41;MQRankSum=-2.828;QD=1.35;ReadPosRankSum=-3.618;VQSLOD=2.1682;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:37:33.03:0,33,1459	0/0:17,0:14:8.47:0,8,390	0/0:54,0:13:36.08:0,36,589	0/0:50,0:13:35.90:0,36,650	1/1:14,0:14:1.25:3,1,0	0/1:11,0:9:37.09:37,0,247	0/0:38,0:35:15.02:0,15,1019	0/0:57,0:44:95.12:0,95,1905	0/1:22,0:16:20.35:20,0,407	0/0:49,1:44:60.92:0,61,1712	0/0:17,0:15:21.78:0,22,398	0/1:20,0:19:12.18:12,0,756	0/1:26,1:24:73.44:73,0,514	0/0:23,0:20:2.70:0,3,686	0/1:47,1:48:99:148,0,632	0/1:23,0:21:51.20:51,0,738	0/1:27,1:26:60.67:61,0,786	0/1:12,2:13:70.46:70,0,419	0/0:16,0:6:18.05:0,18,361	0/1:28,0:24:4.97:5,0,474	0/0:50,3:46:7.82:0,8,363	0/0:37,0:33:24.66:0,25,910	0/0:16,0:11:4.09:0,4,75	0/1:24,0:24:11.84:12,0,238	0/0:17,0:16:30.80:0,31,428	0/0:41,0:31:26.16:0,26,1107	0/0:10,0:9:14.98:0,15,383	0/1:7,0:5:11.42:11,0,145
chr10	25661068	.	A	AGATG	4772.03	PASS	AB=0.946;AC=31;AF=0.554;AN=56;BaseQRankSum=-1.622;DP=804;FS=5.910;HRun=0;HaplotypeScore=270.8437;InbreedingCoeff=-0.3693;MQ=33.31;MQ0=39;MQRankSum=-2.149;QD=6.89;ReadPosRankSum=-3.524;VQSLOD=2.8337;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:40,0:38:75.46:75,0,427	0/1:17,1:15:7.74:104,0,8	0/0:46,0:13:8.10:0,8,139	0/0:50,0:14:8.15:0,8,72	0/1:15,0:15:0:0,0,0	0/1:10,1:9:6.44:178,0,6	0/1:38,0:35:99:130,0,183	1/1:49,0:39:30.56:406,31,0	0/1:22,2:18:95.11:231,0,95	0/1:51,0:44:72.37:305,0,72	1/1:19,0:17:0.44:1,0,0	0/1:20,2:22:53.45:198,0,53	1/1:27,5:29:7.42:556,7,0	1/1:23,2:21:5.45:121,5,0	0/1:49,0:47:57.95:58,0,130	0/1:20,3:21:92.48:212,0,92	1/1:20,8:26:31.61:779,32,0	0/1:15,1:15:70.86:255,0,71	0/1:16,0:7:12.73:44,0,13	0/1:23,2:23:38.22:181,0,38	1/1:59,0:51:5.08:25,5,0	0/1:33,2:31:48.60:125,0,49	0/0:14,0:9:1.27:0,1,22	0/1:24,2:26:14.68:15,0,68	0/1:17,0:16:0.63:167,0,1	0/1:37,2:30:88.92:321,0,89	0/1:7,1:8:15.49:194,0,15	0/1:6,1:5:8.03:91,0,8
chr10	25661087	.	TGGAAG	T	1661.92	PASS	AB=0.920;AC=15;AF=0.268;AN=56;BaseQRankSum=2.094;DP=800;FS=27.507;HRun=0;HaplotypeScore=278.5934;InbreedingCoeff=-0.4068;MQ=33.18;MQ0=29;MQRankSum=-2.949;QD=4.00;ReadPosRankSum=4.663;VQSLOD=0.9307;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:40,2:40:99:107,0,1426	0/1:14,1:14:65.74:66,0,347	0/0:30,0:8:24.04:0,24,425	0/0:34,0:8:20.77:0,21,310	0/0:21,0:21:5.99:0,6,143	0/0:11,0:10:5.06:0,5,332	0/1:24,7:28:99:462,0,412	0/0:49,0:33:10.65:0,11,955	0/0:19,0:17:4.36:0,4,765	0/1:45,2:42:99:138,0,1170	0/0:14,1:15:13.98:0,14,83	0/0:28,0:28:52.65:0,53,1283	0/1:35,1:33:31.90:32,0,1354	0/0:26,0:23:18.89:0,19,815	0/1:43,0:42:38.83:39,0,530	0/1:22,1:20:52.56:53,0,830	0/1:20,0:19:78.17:78,0,748	0/1:17,3:19:99:169,0,705	0/0:24,0:6:11.35:0,11,241	0/1:22,2:23:84.06:84,0,297	0/0:71,1:63:58.94:0,59,635	0/1:21,2:21:99:155,0,188	0/0:16,0:12:0.86:0,1,201	0/1:17,13:31:43.21:292,0,43	0/0:34,0:32:46.53:0,47,596	0/1:34,2:29:80.74:81,0,849	0/1:13,1:13:52.99:53,0,455	0/1:8,0:7:6.77:7,0,234
chr10	25661124	.	T	TGATG	7303.21	PASS	AB=0.832;AC=38;AF=0.731;AN=52;BaseQRankSum=-3.713;DP=567;FS=12.647;HRun=0;HaplotypeScore=187.4358;InbreedingCoeff=0.1735;MQ=37.26;MQ0=28;MQRankSum=1.648;QD=16.19;ReadPosRankSum=3.736;VQSLOD=3.3542;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:19,8:26:8:570,0,8	1/1:3,1:4:3.01:74,3,0	0/0:40,0:21:39.08:0,39,559	0/0:41,0:16:20.81:0,21,253	1/1:7,9:16:2.95:62,3,0	1/1:9,3:12:0.05:378,0,0	0/1:10,0:9:0:0,0,0	1/1:37,0:24:7.43:33,7,0	1/1:9,6:14:3.90:499,4,0	1/1:10,1:8:9.03:147,9,0	0/1:9,0:6:0.02:0,0,0	0/1:22,9:31:40.20:743,0,40	0/1:23,8:29:1.04:654,0,1	1/1:10,7:18:26.28:630,26,0	0/1:27,0:26:3.88:209,0,4	1/1:14,10:23:41.90:979,42,0	1/1:13,1:13:1.96:78,2,0	0/1:8,9:17:20.88:678,0,21	./.	./.	1/1:41,16:49:26.32:491,26,0	0/0:9,2:9:1.25:0,1,3	1/1:7,4:8:3.01:34,3,0	1/1:21,4:25:13.94:290,14,0	0/1:11,10:19:10.58:67,0,11	1/1:14,4:14:15.05:275,15,0	1/1:7,3:9:12.04:265,12,0	1/1:0,5:4:6.02:149,6,0
chr10	25661128	.	G	GGAT	2214.14	PASS	AB=0.990;AC=20;AF=0.357;AN=56;BaseQRankSum=0.137;DP=579;FS=16.803;HRun=0;HaplotypeScore=203.5024;InbreedingCoeff=-0.3427;MQ=37.16;MQ0=28;MQRankSum=1.273;QD=5.89;ReadPosRankSum=10.669;VQSLOD=0.4831;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:28:99:187,0,167	0/1:5,0:5:22.50:23,0,39	0/0:41,0:21:54.06:0,54,818	0/0:41,0:14:29.88:0,30,395	0/1:17,0:17:10.82:11,0,38	0/1:12,0:12:30.72:116,0,31	0/0:10,0:9:6:0,6,68	0/0:39,0:27:53.38:0,53,709	0/1:16,0:15:99:172,0,112	0/1:10,0:8:13.13:13,0,132	0/1:8,0:5:0:0,0,0	0/1:34,0:33:99:192,0,468	0/1:30,0:29:99:167,0,346	0/1:19,0:19:99:185,0,248	0/0:27,0:26:27.04:0,27,414	0/1:27,0:25:99:296,0,162	0/1:13,0:12:99:107,0,184	0/1:16,1:17:99:284,0,142	0/0:9,0:4:6.02:0,6,86	0/0:14,0:10:5.96:0,6,44	0/1:57,1:49:0.93:175,0,1	0/0:9,1:8:14.67:0,15,161	0/0:12,0:9:8.69:0,9,79	0/1:22,3:25:15.50:238,0,16	0/1:21,0:19:7.49:7,0,210	0/1:17,0:13:20.58:65,0,21	0/1:11,0:10:71:71,0,74	1/1:6,0:5:6.01:59,6,0
chr10	25661140	.	GGTA	G	743.41	PASS	AB=0.949;AC=17;AF=0.315;AN=54;BaseQRankSum=2.165;DP=477;FS=24.053;HRun=0;HaplotypeScore=188.0782;InbreedingCoeff=-0.3166;MQ=37.13;MQ0=14;MQRankSum=0.399;QD=2.48;ReadPosRankSum=-3.489;VQSLOD=0.6895;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:19,4:21:74.66:75,0,283	0/1:4,0:4:40.19:40,0,94	0/0:35,0:18:46.38:0,46,826	0/0:37,0:14:37.79:0,38,578	0/0:14,0:14:2.94:0,3,56	0/0:12,1:13:0.10:0,0,265	0/0:6,0:5:5.80:0,6,75	0/1:20,3:18:99:150,0,634	0/0:14,0:13:33.05:0,33,463	0/1:9,0:7:60.41:60,0,91	0/1:7,0:5:0:0,0,0	0/1:30,0:29:0.48:0,0,986	0/1:27,0:27:73.12:73,0,441	0/0:16,0:16:36.28:0,36,513	0/1:17,2:18:23.54:24,0,527	0/1:30,0:26:40.71:41,0,833	1/1:3,3:6:4.52:132,5,0	0/1:18,1:19:15.09:15,0,507	0/0:6,0:4:6.02:0,6,120	./.	0/1:46,6:44:63.73:64,0,114	0/0:10,0:9:5.67:0,6,35	0/1:9,0:8:24.74:25,0,88	0/1:14,4:18:34.78:72,0,35	0/0:12,0:12:9.03:0,9,132	0/1:12,1:9:85.31:85,0,182	0/1:11,0:10:31.33:31,0,289	0/0:6,0:5:9.03:0,9,148
chr10	25661141	.	G	GA	516.99	PASS	AB=0.995;AC=18;AF=0.333;AN=54;BaseQRankSum=-2.510;DP=453;FS=69.725;HRun=0;HaplotypeScore=173.5842;InbreedingCoeff=-0.2494;MQ=37.66;MQ0=11;MQRankSum=0.993;QD=1.85;ReadPosRankSum=7.011;VQSLOD=0.4473;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:21:30.07:30,0,121	0/1:4,0:4:10.22:10,0,35	0/0:32,0:17:46.36:0,46,574	0/0:37,0:14:38.80:0,39,437	0/0:14,0:14:2.50:0,2,9	0/0:12,1:13:1.11:0,1,129	0/0:5,0:4:5.99:0,6,64	0/1:22,1:18:99:109,0,391	0/1:13,0:12:2.12:2,0,114	0/1:9,0:7:36.70:63,0,37	0/0:7,0:6:0:0,0,0	0/1:28,1:28:14.22:14,0,462	0/1:23,0:23:66.14:66,0,177	0/0:15,0:15:0.25:0,0,133	0/0:18,1:18:32.75:0,33,383	0/1:28,0:24:36.61:37,0,329	0/1:5,0:5:31.47:67,0,31	0/1:18,0:19:36.01:36,0,138	0/0:6,0:4:6.02:0,6,84	./.	1/1:47,1:42:4.46:62,4,0	0/0:7,0:7:5.93:0,6,42	0/1:8,0:7:4.98:5,0,73	1/1:10,1:16:9.57:85,10,0	0/0:12,0:12:4.51:0,5,81	0/1:13,0:9:52.67:53,0,81	0/1:11,0:10:17.96:18,0,139	0/1:6,0:5:1.43:1,0,36
chr10	25661143	.	A	AGATG	1581.67	PASS	AB=0.940;AC=19;AF=0.365;AN=52;BaseQRankSum=1.982;DP=454;FS=0.569;HRun=0;HaplotypeScore=189.0789;InbreedingCoeff=-0.5113;MQ=39.12;MQ0=11;MQRankSum=-3.803;QD=5.09;ReadPosRankSum=0.307;VQSLOD=2.7158;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:21,4:23:31.75:252,0,32	0/1:4,0:4:48.27:48,0,49	0/0:31,0:17:11.97:0,12,114	0/0:36,0:15:17.49:0,17,178	0/0:13,1:14:2.49:0,2,10	0/1:13,1:14:80.72:81,0,118	0/1:6,0:5:31.80:45,0,32	0/1:26,0:20:6.77:7,0,286	0/1:12,1:12:55.81:56,0,57	0/1:6,1:5:52.32:62,0,52	./.	0/1:26,2:27:99:229,0,225	0/1:21,1:22:47.70:270,0,48	0/1:12,2:14:99:146,0,106	0/0:18,0:17:26.89:0,27,290	0/1:28,0:24:38.53:39,0,170	0/1:5,0:5:15.47:15,0,35	0/1:16,3:19:41.42:177,0,41	0/0:6,0:4:3.01:0,3,37	./.	0/1:49,2:44:17.08:17,0,26	1/1:7,1:7:1.60:57,2,0	0/0:8,0:7:3.01:0,3,31	0/1:15,1:16:7.99:21,0,8	0/0:11,0:11:0.74:0,1,31	0/1:13,1:11:69.02:72,0,69	0/1:10,1:10:78.15:133,0,78	0/0:6,0:5:8.91:0,9,75
chr10	25661163	.	GGTA	G	84.94	PASS	AB=0.951;AC=6;AF=0.111;AN=54;BaseQRankSum=3.308;DP=430;FS=7.390;HRun=0;HaplotypeScore=216.8014;InbreedingCoeff=-0.1611;MQ=37.55;MQ0=2;MQRankSum=-0.189;QD=0.86;ReadPosRankSum=-3.275;VQSLOD=1.4024;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:32,0:30:6.50:7,0,368	0/0:5,0:5:15.03:0,15,190	0/1:15,0:6:38.43:38,0,152	0/0:15,0:7:20.42:0,20,290	0/0:15,0:15:2.94:0,3,59	0/0:14,0:14:23.51:0,24,403	0/0:7,0:6:7.63:0,8,140	0/0:21,0:16:45.15:0,45,915	0/0:14,0:14:9.80:0,10,439	0/0:9,0:7:18.04:0,18,321	./.	0/0:31,0:30:41.10:0,41,987	0/0:24,0:24:41.69:0,42,755	0/0:19,0:19:47.55:0,48,717	0/1:21,1:21:42.97:43,0,629	0/0:30,0:27:74.15:0,74,1117	0/1:4,2:6:59.27:59,0,72	0/0:14,0:14:24.95:0,25,449	0/0:6,0:4:3.01:0,3,71	0/0:11,0:11:10.02:0,10,65	0/0:38,4:37:4.88:0,5,141	0/1:11,0:10:6.75:7,0,20	0/0:5,0:5:3.01:0,3,55	0/1:13,0:13:45.88:46,0,112	0/0:11,0:11:10.29:0,10,136	0/0:14,0:10:21.07:0,21,354	0/0:11,0:10:33.10:0,33,503	0/0:8,0:7:6.10:0,6,172
chr10	25661184	.	ATGCC	A	7201.50	PASS	AB=0.768;AC=47;AF=0.904;AN=52;BaseQRankSum=0.972;DP=306;FS=0.000;HRun=0;HaplotypeScore=145.1214;InbreedingCoeff=0.4603;MQ=44.71;MQ0=1;MQRankSum=-2.623;QD=24.75;ReadPosRankSum=1.968;VQSLOD=4.7376;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,13:23:43.89:509,44,0	1/1:1,3:4:11.40:161,11,0	0/0:10,0:5:0.54:0,1,78	0/1:18,1:3:0.71:1,0,4	0/1:3,8:11:0:0,0,0	1/1:4,8:12:25.63:301,26,0	1/1:2,5:6:11.63:170,12,0	1/1:6,0:3:9.02:109,9,0	1/1:4,8:12:33.10:528,33,0	1/1:8,2:7:17.08:169,17,0	./.	1/1:6,15:20:46.11:716,46,0	1/1:9,12:21:39.72:619,40,0	1/1:3,10:13:34.60:519,35,0	1/1:8,13:21:45.01:696,45,0	1/1:3,22:22:66.19:1091,66,0	1/1:5,0:5:12:116,12,0	1/1:5,0:5:8.62:45,9,0	./.	1/1:0,9:9:12.94:211,13,0	0/1:17,7:23:0:0,0,0	1/1:3,5:7:11.71:150,12,0	1/1:2,0:2:3.01:47,3,0	1/1:3,1:4:5.62:49,6,0	1/1:0,5:5:15.05:256,15,0	1/1:6,6:9:17.33:213,17,0	1/1:2,6:7:23.67:365,24,0	1/1:0,3:3:9.03:162,9,0
chr10	25661194	.	GGTA	G	1899.09	PASS	AB=0.946;AC=27;AF=0.519;AN=52;BaseQRankSum=3.140;DP=335;FS=2.173;HRun=0;HaplotypeScore=177.9337;InbreedingCoeff=-0.0888;MQ=43.01;MQ0=6;MQRankSum=1.366;QD=7.72;ReadPosRankSum=3.222;VQSLOD=3.1270;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:21,2:22:99:145,0,233	0/0:4,0:4:5.14:0,5,67	0/0:24,0:9:20.94:0,21,291	0/0:28,1:7:10.12:0,10,146	0/1:11,0:11:0.01:0,0,0	0/1:13,0:13:76.56:77,0,191	0/1:7,1:7:34.97:35,0,122	1/1:0,1:1:3.01:47,3,0	0/1:13,0:13:45.98:46,0,224	0/1:10,2:10:99:117,0,255	./.	0/0:24,0:24:10.33:0,10,387	0/1:18,2:20:99:117,0,351	0/1:13,3:15:99:137,0,105	1/1:4,15:18:32.26:671,32,0	0/1:23,1:23:99:192,0,186	1/1:3,2:5:11.53:161,12,0	0/0:3,0:3:9.03:0,9,189	0/0:1,0:1:3:0,3,25	0/1:9,0:9:6.60:7,0,33	1/1:23,2:23:4.30:22,4,0	1/1:10,2:11:10.36:75,10,0	./.	1/1:5,0:5:3.03:19,3,0	0/1:5,0:5:28.47:28,0,32	0/1:11,1:10:40.03:40,0,197	0/1:8,0:7:16.96:17,0,80	1/1:5,0:5:11.01:107,11,0
chr10	25661195	.	G	GA	1479	PASS	AB=0.990;AC=25;AF=0.481;AN=52;BaseQRankSum=1.617;DP=343;FS=2.227;HRun=0;HaplotypeScore=174.7332;InbreedingCoeff=-0.3337;MQ=43.15;MQ0=6;MQRankSum=-1.022;QD=5.54;ReadPosRankSum=3.706;VQSLOD=3.4491;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:22,1:22:50.91:51,0,233	0/0:5,0:5:0.05:0,0,68	0/0:26,0:11:23.07:0,23,247	0/1:28,0:7:28.49:28,0,56	0/0:11,0:11:0:0,0,0	0/1:13,0:13:68.59:69,0,175	0/1:8,0:7:44.48:44,0,108	1/1:1,0:1:3:27,3,0	0/1:14,1:15:92.08:92,0,213	0/1:12,0:10:55.42:55,0,207	./.	0/1:24,0:24:39.72:40,0,369	0/1:21,1:22:99:160,0,293	0/1:16,0:15:81.31:135,0,81	1/1:18,1:18:15.85:179,16,0	0/1:24,0:23:99:192,0,241	0/1:5,0:5:25.05:33,0,25	0/0:3,0:3:9.03:0,9,125	0/0:1,0:1:2.97:0,3,20	0/1:9,0:9:40.06:44,0,40	0/0:21,5:24:4.36:0,4,17	1/1:11,2:12:8.82:85,9,0	./.	1/1:4,0:4:3.57:11,4,0	0/1:5,0:5:43.32:73,0,43	0/1:12,0:10:46.46:46,0,176	0/1:8,0:7:62.48:62,0,83	1/1:3,2:5:14.98:202,15,0
chr10	25661197	.	A	AGATG	4755.26	PASS	AB=0.979;AC=40;AF=0.741;AN=54;BaseQRankSum=-1.055;DP=408;FS=3.231;HRun=0;HaplotypeScore=199.1244;InbreedingCoeff=0.3410;MQ=40.95;MQ0=11;MQRankSum=0.422;QD=14.19;ReadPosRankSum=0.892;VQSLOD=4.7147;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:22,2:23:22:218,0,22	1/1:5,0:5:9.02:129,9,0	0/0:30,0:12:15.46:0,15,205	0/1:32,0:8:5.34:5,0,134	0/1:11,0:11:0:0,0,0	1/1:16,0:16:11.98:226,12,0	1/1:11,0:10:6.96:97,7,0	1/1:6,0:5:11.59:88,12,0	1/1:17,0:17:10.29:358,10,0	1/1:17,0:13:9.50:104,9,0	./.	1/1:27,0:27:32.03:527,32,0	1/1:24,0:24:37.24:525,37,0	1/1:20,0:19:32.29:473,32,0	0/1:18,1:18:0.09:0,0,33	1/1:26,0:25:51.15:846,51,0	0/1:7,0:7:12.89:14,0,13	0/0:3,0:3:0.36:0,0,1	1/1:3,0:2:2.97:20,3,0	0/1:10,0:10:3.66:101,0,4	0/0:30,1:27:3.23:0,3,23	1/1:16,0:15:5.69:147,6,0	0/0:4,0:3:0.43:0,0,1	1/1:6,0:6:10.55:136,11,0	1/1:7,0:7:9.03:165,9,0	1/1:17,0:14:9.46:101,9,0	1/1:9,0:8:15.05:262,15,0	1/1:5,0:5:14.98:212,15,0
chr10	25661208	.	TG	T	796.89	PASS	AB=0.883;AC=6;AF=0.107;AN=56;BaseQRankSum=-0.665;DP=597;FS=2.247;HRun=2;HaplotypeScore=247.9135;InbreedingCoeff=0.1922;MQ=35.31;MQ0=28;MQRankSum=1.748;QD=9.60;ReadPosRankSum=-1.423;VQSLOD=1.0539;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:26:45.46:0,45,518	0/0:7,0:7:13.80:0,14,181	0/0:43,0:9:18.40:0,18,258	0/0:45,1:10:22.22:0,22,368	0/0:17,0:17:2.12:0,2,5	0/0:21,0:21:37.14:0,37,415	0/0:15,0:14:22.76:0,23,269	0/1:12,9:19:99:219,0,243	0/0:25,0:23:49.26:0,49,547	0/0:25,2:19:6.52:0,7,471	0/0:14,0:12:1.12:0,1,19	0/0:35,0:34:73.61:0,74,774	0/0:33,0:32:82.44:0,82,1068	0/0:25,0:24:53.38:0,53,731	1/1:5,17:21:50.08:605,50,0	0/0:28,0:27:76.98:0,77,872	0/1:8,2:10:62.12:62,0,140	0/0:9,0:9:12.06:0,12,178	0/0:15,0:6:18.02:0,18,232	0/0:13,0:13:12.31:0,12,80	0/0:49,0:41:11.58:0,12,166	0/1:21,0:20:14.10:14,0,151	0/0:9,0:7:8.22:0,8,54	0/1:9,0:9:24.35:24,0,105	0/0:16,0:15:16.76:0,17,269	0/0:19,0:15:33.28:0,33,416	0/0:13,0:13:26.35:0,26,267	0/0:5,0:5:15.03:0,15,172
chr10	25661213	.	GGTA	G	2871.29	PASS	AB=0.892;AC=22;AF=0.393;AN=56;BaseQRankSum=3.865;DP=632;FS=17.394;HRun=0;HaplotypeScore=248.9902;InbreedingCoeff=-0.5522;MQ=32.35;MQ0=32;MQRankSum=1.482;QD=6.45;ReadPosRankSum=1.337;VQSLOD=1.4450;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:27,3:28:77.36:77,0,301	0/1:6,0:6:33.54:42,0,34	0/0:43,0:7:20.90:0,21,353	0/0:48,0:10:11.02:0,11,587	1/1:15,4:18:3.26:10,3,0	0/1:18,4:22:99:152,0,137	0/1:13,2:14:29.20:29,0,244	0/1:20,7:23:99:425,0,342	0/1:22,3:23:99:260,0,117	0/0:26,0:18:25.37:0,25,488	0/0:14,0:12:0.68:0,1,62	0/1:31,3:33:99:221,0,354	0/1:32,2:33:99:188,0,542	0/1:24,2:24:99:232,0,229	0/0:24,0:23:43.87:0,44,617	0/1:23,7:29:99:504,0,146	0/1:7,3:10:69.49:270,0,69	0/1:9,0:9:5.87:6,0,114	0/0:21,0:9:15.05:0,15,290	0/1:8,4:12:19.80:90,0,20	0/1:45,6:43:10.35:10,0,230	0/1:23,1:22:71.03:71,0,210	0/0:11,0:9:6.77:0,7,93	0/1:14,0:14:35.83:36,0,65	0/1:15,1:15:86.87:87,0,166	0/1:22,1:19:52.83:53,0,347	0/1:9,3:12:61.17:206,0,61	0/1:4,1:5:57.64:58,0,117
chr10	25661214	.	G	GA	1935.08	PASS	AB=0.842;AC=18;AF=0.321;AN=56;BaseQRankSum=6.134;DP=616;FS=44.819;HRun=0;HaplotypeScore=232.6909;InbreedingCoeff=-0.5142;MQ=32.46;MQ0=33;MQRankSum=0.330;QD=5.48;ReadPosRankSum=5.773;VQSLOD=1.8051;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:24,6:28:9.12:9,0,316	0/1:4,2:6:31.74:61,0,32	0/0:43,0:7:21.06:0,21,267	0/0:49,0:10:7.78:0,8,344	0/0:16,3:18:0.37:0,0,6	0/1:17,4:21:99:131,0,142	0/1:15,0:14:7.51:8,0,222	0/1:28,0:23:99:147,0,306	0/1:18,4:20:95.56:163,0,96	0/0:24,0:16:36.51:0,37,401	0/0:10,3:11:3.48:0,3,43	0/1:26,7:32:99:200,0,344	0/1:25,7:31:99:181,0,418	0/1:18,7:23:99:187,0,195	0/0:26,0:25:49.33:0,49,585	0/1:19,9:27:99:405,0,112	0/1:9,1:10:26.94:144,0,27	0/0:10,0:10:4.63:0,5,88	0/0:21,0:9:15.05:0,15,209	0/1:8,5:13:32.35:83,0,32	0/0:44,2:39:5.74:0,6,164	0/1:18,6:22:40.87:41,0,167	0/0:11,0:9:6.42:0,6,77	0/1:12,2:14:49.83:53,0,50	0/1:12,2:13:40.96:41,0,137	0/1:21,1:18:9.98:10,0,219	0/1:9,2:11:65.44:134,0,65	0/1:3,2:5:58.43:90,0,58
chr10	25661220	.	G	GGTA	2342.70	PASS	AB=0.939;AC=22;AF=0.393;AN=56;BaseQRankSum=4.744;DP=708;FS=5.800;HRun=0;HaplotypeScore=263.5360;InbreedingCoeff=-0.4888;MQ=31.00;MQ0=46;MQRankSum=0.482;QD=4.62;ReadPosRankSum=1.581;VQSLOD=2.1343;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:34,3:34:50.05:50,0,326	0/1:7,1:8:25.31:86,0,25	0/0:41,0:7:15.02:0,15,232	0/0:45,0:9:27.09:0,27,441	1/1:21,1:20:5.53:30,6,0	0/1:25,1:25:99:151,0,159	0/1:16,0:14:32.16:32,0,273	0/0:36,0:27:31.25:0,31,724	0/1:23,1:22:99:165,0,146	0/1:32,0:23:2.12:2,0,361	0/0:12,2:12:3.48:0,3,52	0/1:36,2:36:99:249,0,449	0/1:33,3:34:99:232,0,501	0/1:22,4:24:99:247,0,164	0/0:28,0:27:39.69:0,40,662	0/1:25,4:27:99:401,0,119	0/0:14,0:13:16.04:0,16,317	0/1:11,0:11:27.61:28,0,162	0/0:23,0:10:10.28:0,10,243	0/1:22,2:22:7.41:124,0,7	0/1:52,0:43:11.58:12,0,178	0/1:24,2:23:99:104,0,160	0/1:14,0:10:3.82:4,0,70	0/1:13,1:14:30.84:88,0,31	0/1:17,1:15:97.75:139,0,98	0/1:30,0:24:76.72:77,0,222	0/1:18,0:18:43.50:154,0,44	0/1:3,2:5:27.81:126,0,28
chr10	25661221	.	GA	G	4427.94	PASS	AB=0.772;AC=22;AF=0.393;AN=56;BaseQRankSum=-2.636;DP=713;FS=30.707;HRun=1;HaplotypeScore=234.7798;InbreedingCoeff=-0.5440;MQ=31.08;MQ0=50;MQRankSum=-2.092;QD=8.32;ReadPosRankSum=-2.007;VQSLOD=-0.1502;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:23,14:34:99:116,0,352	0/1:5,3:8:44.30:110,0,44	0/0:40,0:7:20.78:0,21,237	0/0:44,0:9:27.09:0,27,425	1/1:19,3:20:5.43:79,5,0	0/1:16,11:25:99:308,0,154	0/1:12,4:14:78.85:79,0,284	0/0:36,0:27:70.66:0,71,892	0/1:15,9:22:99:382,0,155	0/1:29,5:23:99:152,0,401	0/0:12,3:12:3.63:0,4,63	0/1:27,12:37:99:557,0,480	0/1:32,6:36:99:302,0,477	0/1:18,8:24:99:437,0,242	0/0:27,0:26:51:0,51,764	0/1:25,5:28:99:446,0,184	0/0:14,0:13:22.94:0,23,348	0/1:6,5:11:99:135,0,177	0/1:23,0:10:40.15:40,0,192	0/1:13,11:22:72.58:106,0,73	0/1:42,11:43:42.76:43,0,197	0/1:21,5:23:38.02:38,0,246	0/1:11,3:10:30.59:31,0,94	0/1:6,8:14:34.73:191,0,35	0/1:9,9:15:98.85:262,0,99	0/1:23,7:24:99:307,0,254	0/1:8,10:18:28.86:306,0,29	0/0:5,0:5:6.81:0,7,124
chr10	25661224	.	G	GGTA	5636.89	PASS	AB=0.936;AC=24;AF=0.429;AN=56;BaseQRankSum=-0.501;DP=751;FS=17.843;HRun=0;HaplotypeScore=252.2558;InbreedingCoeff=-0.6044;MQ=30.27;MQ0=54;MQRankSum=0.596;QD=9.59;ReadPosRankSum=-1.932;VQSLOD=2.2942;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:32,3:33:99:216,0,257	0/1:6,1:7:36.28:101,0,36	0/0:38,0:6:12:0,12,211	0/0:42,0:9:27.09:0,27,430	1/1:19,3:19:5.68:65,6,0	0/1:23,3:24:99:425,0,101	0/1:16,0:14:94.87:95,0,308	0/0:38,0:28:71.59:0,72,996	0/1:21,3:22:99:424,0,153	0/1:43,0:31:99:316,0,420	0/1:19,0:15:10.96:11,0,77	0/1:35,4:37:99:523,0,477	0/1:35,4:37:99:444,0,399	0/1:26,3:27:99:499,0,121	0/0:30,0:29:50.51:0,51,872	0/1:28,5:31:99:710,0,141	0/0:15,0:14:21.95:0,22,405	0/1:13,0:13:99:106,0,221	0/1:25,0:11:71.95:72,0,215	0/1:22,3:23:84.63:198,0,85	0/1:51,2:45:61.28:61,0,219	0/1:25,3:25:58.69:59,0,224	0/1:17,0:12:3.78:4,0,85	0/1:17,1:18:28.18:278,0,28	0/1:17,1:15:99:267,0,109	0/1:32,1:26:99:300,0,235	0/1:15,2:17:15.91:422,0,16	0/1:5,0:5:40.18:40,0,92
chr10	25662313	.	T	TA	1511.57	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-6.864;DP=520;FS=10.670;HRun=8;HaplotypeScore=50.9520;InbreedingCoeff=0.9496;MQ=53.86;MQ0=2;MQRankSum=-2.689;QD=22.56;ReadPosRankSum=-1.998;VQSLOD=2.7271;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:45.02:0,45,411	0/0:9,0:9:21:0,21,192	0/0:18,0:13:22.69:0,23,265	0/0:9,0:5:8.13:0,8,63	0/0:38,0:38:99:0,99,902	0/0:14,0:14:33.01:0,33,302	0/0:10,0:10:30.02:0,30,274	1/1:4,28:27:69.14:768,69,0	0/0:15,0:15:35.82:0,36,329	0/0:28,0:28:69:0,69,626	0/0:21,0:21:57.03:0,57,520	0/0:17,0:17:36.02:0,36,328	0/0:14,0:14:36.01:0,36,325	0/0:17,0:17:45.02:0,45,412	0/0:23,0:23:59.70:0,60,548	0/0:21,0:21:48.02:0,48,439	1/1:2,33:35:75.22:865,75,0	0/0:20,0:20:39.01:0,39,357	0/0:15,0:15:42.02:0,42,384	0/0:23,0:23:68.99:0,69,623	0/0:7,0:7:15.01:0,15,137	0/0:7,0:7:21.01:0,21,192	0/0:9,0:9:21.01:0,21,192	0/0:18,0:18:42:0,42,378	0/0:21,0:21:51.02:0,51,467	0/0:22,0:22:60.03:0,60,549	0/0:25,0:24:69.04:0,69,630	0/0:14,0:14:42.02:0,42,384
chr10	25663238	.	A	AAAAAAAAAAAAACAAAAAAAAAC	18417.12	PASS	AB=1.000;AC=45;AF=0.833;AN=54;BaseQRankSum=-2.851;DP=263;FS=17.459;HRun=0;HaplotypeScore=127.7470;InbreedingCoeff=0.4648;MQ=49.14;MQ0=16;MQRankSum=-3.893;QD=74.56;ReadPosRankSum=3.395;VQSLOD=3.3414;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:20,0:19:99:258,0,289	1/1:5,2:8:21.04:1466,21,0	0/0:7,0:4:11.65:0,12,82	0/0:6,0:6:8.31:0,8,58	1/1:16,0:15:23.92:1099,24,0	1/1:11,0:7:11.93:525,12,0	1/1:7,0:6:15.05:622,15,0	0/1:15,0:15:0.02:0,0,109	1/1:12,0:12:20.94:1201,21,0	1/1:13,0:9:10.64:628,11,0	1/1:12,1:10:27.05:994,27,0	1/1:10,0:5:12.02:536,12,0	1/1:7,0:5:6.02:370,6,0	1/1:8,0:6:17.85:721,18,0	1/1:10,0:8:12:168,12,0	1/1:13,0:9:17.89:964,18,0	1/1:7,0:6:14.72:199,15,0	0/0:3,0:1:0:0,0,0	1/1:7,0:9:21.06:532,21,0	0/1:9,0:8:5.04:704,0,5	./.	1/1:5,0:4:12.04:597,12,0	1/1:1,0:1:3.01:212,3,0	1/1:3,0:2:2.99:223,3,0	1/1:17,0:16:41.90:1638,42,0	1/1:9,0:8:17.93:645,18,0	1/1:15,0:16:42.12:2899,42,0	1/1:4,1:4:12.04:1218,12,0
chr10	25663241	.	A	AAAAAAAAAAC	7889.86	PASS	AB=0.977;AC=35;AF=0.648;AN=54;BaseQRankSum=5.582;DP=267;FS=9.373;HRun=0;HaplotypeScore=118.6083;InbreedingCoeff=-0.1222;MQ=50.07;MQ0=15;MQRankSum=-4.784;QD=31.43;ReadPosRankSum=6.402;VQSLOD=3.4066;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:19,0:18:7.62:179,0,8	1/1:8,0:8:4.17:625,4,0	0/0:7,0:4:11.94:0,12,96	0/0:6,0:6:11.13:0,11,74	0/1:16,0:16:43.92:510,0,44	0/1:11,0:7:5.90:234,0,6	1/1:9,0:7:14.47:288,14,0	0/1:15,0:15:11.12:146,0,11	0/1:11,0:11:19.39:385,0,19	1/1:10,0:6:9.01:203,9,0	1/1:13,0:10:13.73:418,14,0	0/1:10,0:5:1.48:171,0,1	1/1:8,0:6:5.97:181,6,0	0/1:9,0:7:6.68:366,0,7	0/1:8,1:13:16:263,0,16	0/1:13,0:9:28.37:250,0,28	0/1:7,0:6:18.46:50,0,18	0/0:3,0:1:2.96:0,3,19	0/1:9,0:9:25.31:78,0,25	0/1:8,0:7:51.96:282,0,52	./.	1/1:5,0:4:12.04:246,12,0	1/1:1,0:1:3.01:55,3,0	1/1:4,0:3:6:171,6,0	1/1:18,0:17:14.72:821,15,0	0/1:10,0:9:76.48:278,0,76	1/1:18,0:17:19.32:1199,19,0	1/1:5,0:4:12.04:493,12,0
chr10	25663242	.	A	AAAAAAAAAC	7379.80	PASS	AB=0.994;AC=34;AF=0.607;AN=56;BaseQRankSum=5.706;DP=270;FS=7.321;HRun=0;HaplotypeScore=115.2818;InbreedingCoeff=-0.1472;MQ=52.56;MQ0=15;MQRankSum=-6.834;QD=29.28;ReadPosRankSum=7.057;VQSLOD=3.1335;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:18:5.81:223,6,0	1/1:8,0:8:4.15:581,4,0	0/0:8,0:5:11.95:0,12,97	0/0:6,0:6:11.69:0,12,80	0/1:16,0:16:46.45:464,0,46	0/1:12,0:7:4.94:208,0,5	0/1:8,0:6:6.68:258,0,7	0/1:16,0:16:18.21:158,0,18	0/1:10,1:11:19.44:340,0,19	1/1:10,0:6:9.01:175,9,0	1/1:12,0:10:13.32:381,13,0	0/1:10,0:5:0.60:152,0,1	0/1:9,0:7:15.15:168,0,15	0/1:9,0:7:6.75:355,0,7	0/1:14,0:13:15.54:197,0,16	0/1:13,0:9:28.39:218,0,28	0/1:6,0:6:18.36:52,0,18	0/0:3,0:2:2.96:0,3,19	0/1:9,0:9:27.44:64,0,27	0/1:8,0:7:51.96:296,0,52	0/0:1,0:1:0:0,0,0	1/1:5,0:4:12.04:201,12,0	1/1:1,0:1:3.01:41,3,0	1/1:4,0:3:6:167,6,0	1/1:17,1:17:14.20:790,14,0	0/1:10,0:9:78.78:267,0,79	1/1:18,0:17:19.32:1160,19,0	1/1:3,2:4:12.04:462,12,0
chr10	25663246	.	A	AAAAAAAC	4375.68	PASS	AB=1.000;AC=31;AF=0.554;AN=56;BaseQRankSum=5.642;DP=285;FS=18.167;HRun=0;HaplotypeScore=113.2228;InbreedingCoeff=-0.2904;MQ=59.65;MQ0=12;MQRankSum=-5.232;QD=16.70;ReadPosRankSum=6.654;VQSLOD=2.3466;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:20,0:19:6.67:88,0,7	0/1:9,0:9:19.01:367,0,19	0/0:10,0:7:10.85:0,11,95	0/0:7,0:7:12.66:0,13,90	0/1:19,0:19:92.79:306,0,93	0/1:12,0:7:37.53:60,0,38	0/1:10,0:8:69.68:107,0,70	1/1:7,8:20:22.39:537,22,0	0/1:11,0:11:26.19:157,0,26	1/1:10,0:6:9.50:108,9,0	1/1:13,0:10:4.73:211,5,0	0/1:9,0:4:3.06:62,0,3	0/1:9,0:7:34.07:106,0,34	0/1:8,0:6:19.33:112,0,19	0/1:12,0:12:8.74:135,0,9	0/1:13,0:9:33.23:126,0,33	1/1:4,0:7:5.23:119,5,0	0/0:4,0:4:8.92:0,9,62	0/1:10,0:10:29.83:30,0,32	0/1:10,0:9:48.97:153,0,49	0/0:2,0:2:6:0,6,52	1/1:5,0:4:6.96:78,7,0	1/1:1,0:1:2.98:22,3,0	0/1:3,0:3:10.79:106,0,11	0/1:18,0:18:72.20:349,0,72	0/1:10,0:9:76.82:156,0,77	0/1:19,0:18:24.69:602,0,25	1/1:4,0:4:12.04:278,12,0
chr10	25663252	.	C	CAAAAAAAAAAAAAA	9127.77	PASS	AB=0.971;AC=26;AF=0.464;AN=56;BaseQRankSum=3.497;DP=265;FS=48.308;HRun=15;HaplotypeScore=127.3488;InbreedingCoeff=-0.4944;MQ=76.38;MQ0=8;MQRankSum=-8.885;QD=39.69;ReadPosRankSum=7.084;VQSLOD=-0.5274;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:19,0:18:36.13:36,0,223	0/1:8,0:8:16.53:839,0,17	0/0:14,0:11:22.78:0,23,210	0/0:10,0:10:4.86:0,5,69	0/1:20,0:20:85.96:782,0,86	0/1:9,0:6:28.57:182,0,29	0/1:9,0:7:51.02:194,0,51	0/1:17,0:18:52.04:52,0,240	0/1:9,1:10:20.67:516,0,21	0/1:5,0:5:11.93:515,0,12	1/1:10,1:9:18.95:578,19,0	1/1:6,0:4:2.52:200,3,0	0/1:5,0:4:15.85:74,0,16	0/1:6,0:5:27.07:93,0,27	0/1:14,0:15:91.74:351,0,92	0/1:9,0:9:48.85:542,0,49	0/1:7,0:7:17.73:136,0,18	0/0:5,0:5:11.81:0,12,80	0/1:11,0:11:28:281,0,28	0/1:10,0:10:99:197,0,129	0/0:3,0:3:8.98:0,9,71	0/1:6,0:5:9.93:434,0,10	1/1:2,0:2:3.01:120,3,0	0/0:3,0:3:8.90:0,9,61	0/1:13,1:14:6.72:894,0,7	0/1:8,0:7:29.51:285,0,30	0/1:15,1:16:64.79:1276,0,65	0/1:4,2:6:52.42:550,0,52
chr10	25663320	.	GTAGT	G	14959.96	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=1.402;DP=439;FS=27.562;HRun=0;HaplotypeScore=83.8528;InbreedingCoeff=0.9857;MQ=78.68;MQ0=0;MQRankSum=-4.811;QD=46.17;ReadPosRankSum=6.469;VQSLOD=3.2749;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,18:18:39.13:727,39,0	1/1:0,7:8:24.08:448,24,0	0/0:16,0:16:45.02:0,45,1086	0/0:10,0:10:21.96:0,22,524	1/1:1,15:16:39.13:728,39,0	1/1:1,27:27:63.22:1175,63,0	1/1:0,11:11:24.08:448,24,0	0/0:38,0:38:96.26:0,96,2372	1/1:2,8:10:24.08:447,24,0	1/1:1,9:10:27.09:501,27,0	1/1:2,8:10:18.06:315,18,0	1/1:1,17:18:48.16:896,48,0	1/1:0,17:17:42.14:784,42,0	1/1:1,11:12:30.10:559,30,0	0/0:30,0:30:75.21:0,75,1928	1/1:1,18:18:45.15:840,45,0	0/0:21,0:21:57.20:0,57,1520	1/1:0,10:10:30.10:560,30,0	1/1:1,8:9:24.08:439,24,0	1/1:0,20:20:57.20:1063,57,0	1/1:0,23:23:60.21:1120,60,0	1/1:0,9:9:27.09:504,27,0	1/1:0,8:8:21.07:392,21,0	1/1:1,7:8:12.04:224,12,0	1/1:3,15:18:42.14:784,42,0	1/1:0,13:13:39.13:721,39,0	1/1:1,20:21:48.16:896,48,0	1/1:0,7:7:21.07:392,21,0
chr10	25665752	.	G	GA	21128.75	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-8.863;DP=647;FS=14.974;HRun=4;HaplotypeScore=56.3021;InbreedingCoeff=0.9970;MQ=70.88;MQ0=1;MQRankSum=-4.145;QD=34.98;ReadPosRankSum=6.074;VQSLOD=3.3177;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,35:37:93.31:1258,93,0	1/1:2,13:15:42.12:551,42,0	0/0:26,0:22:56.63:0,57,556	0/0:16,0:16:43.38:0,43,437	1/1:1,32:33:93.14:1176,93,0	1/1:0,27:27:63.21:852,63,0	1/1:1,9:10:24.08:325,24,0	1/1:2,31:33:90.25:1143,90,0	1/1:2,17:19:51.17:690,51,0	1/1:0,31:30:93.25:1196,93,0	1/1:1,23:24:63.21:853,63,0	1/1:0,18:18:48.16:648,48,0	1/1:1,17:18:48.16:649,48,0	1/1:2,21:23:57.19:768,57,0	1/1:1,22:23:54.17:716,54,0	1/1:1,16:17:36.10:470,36,0	1/1:1,31:32:86.10:1142,86,0	1/1:2,11:13:30.10:403,30,0	1/1:4,21:25:66.17:845,66,0	1/1:3,27:30:81.11:1032,81,0	1/1:1,12:12:27.09:365,27,0	1/1:1,21:22:60.20:812,60,0	1/1:0,23:23:66.22:893,66,0	1/1:1,16:17:39.13:527,39,0	1/1:0,30:29:90.30:1218,90,0	1/1:3,25:29:81.24:1061,81,0	1/1:1,33:34:90.30:1217,90,0	1/1:1,7:8:24.08:320,24,0
chr10	25666311	.	T	TA	459.29	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.533;DP=548;FS=0.000;HRun=8;HaplotypeScore=56.8007;InbreedingCoeff=0.8382;MQ=68.69;MQ0=0;MQRankSum=-0.600;QD=19.14;ReadPosRankSum=0.242;VQSLOD=3.2460;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:53.87:0,54,472	0/0:10,0:10:30.02:0,30,274	0/0:8,0:8:11.04:0,11,87	0/0:12,0:11:17.66:0,18,149	0/0:28,0:28:78:0,78,703	0/0:22,0:22:57.03:0,57,521	0/0:17,0:17:47.99:0,48,429	0/0:17,1:18:4.24:0,4,275	0/0:17,0:17:45:0,45,403	0/0:24,0:24:60.03:0,60,549	0/0:21,0:21:57.03:0,57,522	0/0:14,0:14:33.02:0,33,302	0/0:23,0:23:69.04:0,69,631	0/0:18,0:18:51.03:0,51,466	1/1:5,19:24:48.14:554,48,0	0/0:17,0:17:42.01:0,42,384	0/0:21,0:21:63.02:0,63,568	0/0:28,0:28:77.99:0,78,703	0/0:12,0:12:33.01:0,33,299	0/0:32,0:32:77.99:0,78,700	0/0:15,0:15:39:0,39,354	0/0:17,0:17:48.03:0,48,439	0/0:17,0:17:48.02:0,48,439	0/0:18,0:18:54.01:0,54,488	0/0:28,0:28:78.02:0,78,707	0/0:23,0:23:65.96:0,66,589	0/0:33,0:32:96.02:0,96,869	0/0:10,0:10:29.97:0,30,266
chr10	25667313	.	G	GA	355.95	PASS	AB=0.897;AC=3;AF=0.054;AN=56;BaseQRankSum=-5.984;DP=628;FS=15.324;HRun=10;HaplotypeScore=67.4940;InbreedingCoeff=0.6565;MQ=82.30;MQ0=0;MQRankSum=-0.227;QD=7.42;ReadPosRankSum=1.655;VQSLOD=0.5534;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:77.83:0,78,632	0/0:14,0:14:38.94:0,39,320	0/0:30,0:29:53.62:0,54,428	0/0:27,0:28:22.10:0,22,149	0/0:24,1:26:35.98:0,36,491	0/0:23,0:24:49.96:0,50,399	0/0:19,0:19:46.91:0,47,366	0/0:30,0:30:68.75:0,69,564	0/0:18,0:18:44.62:0,45,355	0/0:24,0:24:50.91:0,51,417	0/0:21,0:21:53.92:0,54,443	0/0:25,0:25:65.86:0,66,535	0/0:30,0:30:19.48:0,19,505	0/0:15,0:16:40.98:0,41,326	1/1:4,18:22:42.11:448,42,0	0/0:21,0:21:53.92:0,54,443	0/0:26,1:27:45.91:0,46,580	0/0:12,0:12:26.95:0,27,220	0/1:23,3:26:10.92:11,0,311	0/0:21,2:23:18.93:0,19,362	0/0:18,0:19:26.62:0,27,352	0/0:17,0:18:46.98:0,47,375	0/0:21,0:21:44.85:0,45,361	0/0:24,0:24:62.90:0,63,513	0/0:31,0:31:71.88:0,72,591	0/0:14,0:14:35.95:0,36,295	0/0:20,0:21:49.92:0,50,394	0/0:9,0:9:23.86:0,24,184
chr10	25668077	.	CAT	C	2184.29	PASS	AB=0.748;AC=36;AF=0.900;AN=40;BaseQRankSum=0.827;DP=204;FS=1.909;HRun=0;HaplotypeScore=48.3292;InbreedingCoeff=0.0382;MQ=73.98;MQ0=2;MQRankSum=-0.374;QD=13.74;ReadPosRankSum=2.095;VQSLOD=3.2787;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	1/1:2,0:2:3.01:32,3,0	./.	0/0:11,0:8:1.55:0,2,4	1/1:10,1:12:8.80:71,9,0	1/1:5,5:10:24.07:267,24,0	./.	1/1:18,12:30:45.97:503,46,0	1/1:5,2:7:6.01:65,6,0	1/1:5,3:8:9.03:102,9,0	./.	1/1:4,0:4:3.01:35,3,0	1/1:3,3:6:9.02:100,9,0	1/1:2,3:5:12.03:132,12,0	1/1:9,0:9:5.68:28,6,0	./.	1/1:6,2:8:12.01:125,12,0	1/1:5,2:7:7.26:70,7,0	0/1:7,3:9:37:106,0,37	0/1:5,3:8:12.29:90,0,12	./.	./.	1/1:3,2:5:3.01:33,3,0	./.	1/1:3,3:6:12.03:132,12,0	1/1:4,2:6:9.03:104,9,0	1/1:7,5:12:18.03:190,18,0	1/1:1,3:4:9.02:100,9,0
chr10	25668094	.	ATATATATATATGTATATATATATATATATG	A	425.89	PASS	AC=2;AF=0.042;AN=48;BaseQRankSum=0.428;DP=192;FS=2.179;HRun=0;HaplotypeScore=163.5736;InbreedingCoeff=0.3036;MQ=57.66;MQ0=3;MQRankSum=-1.298;QD=42.59;ReadPosRankSum=-0.217;VQSLOD=2.4022;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:5:3.01:0,3,82	0/0:1,0:1:3.01:0,3,264	./.	0/0:9,0:4:3.37:0,3,17	0/0:11,0:11:24.08:0,24,1215	0/0:11,0:11:30.10:0,30,2426	0/0:3,0:3:3.01:0,3,282	0/0:37,0:37:99:0,108,6237	0/0:4,0:4:12.04:0,12,574	0/0:6,0:6:18.06:0,18,851	0/0:5,0:5:2.01:0,2,256	0/0:1,0:1:3.01:0,3,178	0/0:5,0:5:12.51:0,13,887	0/0:6,0:6:15.05:0,15,1336	1/1:4,6:10:9.03:507,9,0	0/0:5,0:5:9.01:0,9,431	0/0:14,0:14:15.05:0,15,820	0/0:11,0:11:21.07:0,21,1483	0/0:11,0:10:27.09:0,27,1705	0/0:7,0:7:15.05:0,15,852	./.	./.	0/0:2,0:2:3.01:0,3,282	./.	0/0:7,0:7:15.05:0,15,1083	0/0:4,0:4:9.03:0,9,494	0/0:9,0:9:24.08:0,24,1657	0/0:5,0:4:12.04:0,12,787
chr10	25668106	.	GTA	G	2212.72	PASS	AB=0.909;AC=43;AF=0.896;AN=48;BaseQRankSum=-0.443;DP=186;FS=0.000;HRun=0;HaplotypeScore=52.4216;InbreedingCoeff=0.2554;MQ=70.07;MQ0=3;MQRankSum=2.853;QD=12.72;ReadPosRankSum=0.398;VQSLOD=2.7276;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:3,0:3:0.47:0,0,1	1/1:1,0:1:3.01:34,3,0	0/0:3,0:2:0:0,0,0	0/1:9,0:6:0.02:1,0,0	1/1:0,9:9:15.05:180,15,0	1/1:5,6:11:18.05:214,18,0	1/1:0,1:1:3.01:37,3,0	1/1:16,0:35:6.06:81,6,0	1/1:4,1:5:12.04:143,12,0	1/1:2,4:6:11.94:112,12,0	1/1:2,4:6:3.01:37,3,0	./.	1/1:2,3:5:9.03:106,9,0	1/1:2,4:6:11.62:114,12,0	1/1:6,0:6:5.68:28,6,0	1/1:5,0:5:12.02:132,12,0	1/1:3,0:12:3.84:13,4,0	1/1:1,15:16:15.05:181,15,0	1/1:8,2:9:17.62:175,18,0	1/1:2,2:4:6.02:72,6,0	./.	1/1:2,0:2:6.02:73,6,0	1/1:2,1:3:6.01:60,6,0	./.	1/1:2,4:6:9.03:104,9,0	./.	1/1:2,5:7:15.04:176,15,0	1/1:6,2:7:18.06:217,18,0
chr10	25668513	.	G	GA	21210.77	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=0.146;DP=623;FS=1.013;HRun=2;HaplotypeScore=98.1146;InbreedingCoeff=0.9883;MQ=93.12;MQ0=0;MQRankSum=-9.186;QD=38.71;ReadPosRankSum=6.374;VQSLOD=4.3334;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,36:38:99:1511,105,0	1/1:0,15:15:45.15:648,45,0	0/0:25,0:25:69.19:0,69,825	0/0:28,0:28:61.52:0,62,798	1/1:1,20:21:57.15:797,57,0	1/1:2,10:12:24.07:346,24,0	1/1:0,24:24:63.21:905,63,0	1/1:1,23:23:69.23:994,69,0	1/1:1,24:25:69.23:992,69,0	1/1:1,16:17:51.15:691,51,0	1/1:0,15:15:39.13:560,39,0	1/1:1,20:21:54.18:777,54,0	1/1:0,30:30:87.29:1252,87,0	1/1:1,26:27:72.24:1035,72,0	0/0:22,0:22:60.18:0,60,733	1/1:1,19:20:48.16:691,48,0	1/1:3,35:38:96.32:1381,96,0	1/1:1,25:26:72.24:1037,72,0	1/1:4,14:18:42.13:588,42,0	1/1:0,19:19:54.14:754,54,0	1/1:1,24:25:66.22:950,66,0	1/1:0,23:23:66.22:949,66,0	1/1:1,13:14:33.11:473,33,0	1/1:0,24:24:72.24:1037,72,0	1/1:0,24:24:66.22:948,66,0	1/1:1,22:23:63.21:901,63,0	1/1:1,20:21:57.19:820,57,0	1/1:0,4:4:12.04:173,12,0
chr10	25669599	.	A	AC	4090.62	PASS	AB=0.703;AC=43;AF=0.768;AN=56;BaseQRankSum=-1.266;DP=493;FS=4.352;HRun=10;HaplotypeScore=71.5343;InbreedingCoeff=0.0545;MQ=77.48;MQ0=0;MQRankSum=-1.308;QD=9.28;ReadPosRankSum=1.116;VQSLOD=2.5267;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,12:27:24.52:251,25,0	1/1:3,3:6:3.01:32,3,0	0/1:18,0:18:33.05:55,0,33	0/1:18,0:18:14.98:15,0,65	1/1:9,6:15:12.03:128,12,0	0/1:7,13:20:9.61:110,0,10	1/1:9,10:19:18.04:192,18,0	0/0:22,1:24:25.94:0,26,203	1/1:4,18:22:23.87:252,24,0	0/1:12,8:20:56.97:211,0,57	1/1:8,5:13:6.02:64,6,0	1/1:2,17:19:27.07:284,27,0	0/1:8,9:18:3.59:164,0,4	1/1:4,18:22:27.07:288,27,0	1/1:8,15:23:24.05:249,24,0	0/1:3,13:16:22.21:197,0,22	0/0:28,0:28:56.86:0,57,464	1/1:6,12:18:2.43:225,2,0	1/1:5,8:13:21.02:212,21,0	0/1:7,10:17:27.83:139,0,28	1/1:12,19:31:17.26:217,17,0	0/1:5,7:12:9.52:113,0,10	1/1:4,10:14:6.02:64,6,0	1/1:4,9:13:11.62:128,12,0	1/1:4,4:8:8.89:79,9,0	1/1:10,4:14:9.02:96,9,0	1/1:12,5:17:26.99:244,27,0	0/1:1,3:4:12.61:84,0,13
chr10	25670032	.	C	CA	2756.92	PASS	AB=0.715;AC=40;AF=0.714;AN=56;BaseQRankSum=-1.138;DP=508;FS=3.940;HRun=15;HaplotypeScore=69.3316;InbreedingCoeff=0.2355;MQ=55.44;MQ0=22;MQRankSum=2.051;QD=6.76;ReadPosRankSum=-1.780;VQSLOD=2.3377;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,15:25:20.11:196,20,0	1/1:4,3:6:5.99:50,6,0	0/0:19,0:5:5.91:0,6,25	0/0:11,0:2:2.86:0,3,15	1/1:13,13:28:3.02:149,3,0	0/1:10,8:18:33:80,0,33	1/1:9,5:14:10.08:68,10,0	0/0:18,0:19:21.89:0,22,141	1/1:10,3:13:0.11:105,0,0	1/1:8,15:24:25.59:275,26,0	1/1:4,9:13:5.92:151,6,0	0/0:6,10:16:2.68:0,3,16	0/1:14,3:17:11.25:97,0,11	1/1:12,2:14:20.63:141,21,0	1/1:18,0:16:5.40:71,5,0	0/1:10,10:20:33.02:80,0,33	0/0:34,0:34:41.32:0,41,239	1/1:3,10:13:10.98:109,11,0	1/1:7,13:21:20.14:242,20,0	1/1:14,10:26:23.54:259,24,0	1/1:5,0:5:1.72:4,2,0	0/1:11,13:25:14.86:170,0,15	1/1:7,5:15:1.92:137,2,0	1/1:8,4:12:13.93:98,14,0	1/1:7,12:21:8.62:155,9,0	1/1:6,11:16:23.43:177,23,0	0/1:9,2:22:18.77:71,0,19	0/1:10,3:12:24.04:38,0,24
chr10	25670050	.	AGCCTAAATCAATT	A	738	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.077;DP=434;FS=5.775;HRun=0;HaplotypeScore=154.5572;InbreedingCoeff=0.7373;MQ=76.21;MQ0=4;MQRankSum=-4.414;QD=92.25;ReadPosRankSum=1.726;VQSLOD=3.4210;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:39.13:0,39,2411	0/0:3,0:3:6.02:0,6,393	0/0:20,0:13:36.12:0,36,1496	0/0:13,0:8:24.04:0,24,1078	0/0:21,0:21:39.13:0,39,2238	0/0:13,0:13:33.11:0,33,1935	0/0:9,0:9:17.63:0,18,1157	0/0:19,0:19:48.16:0,48,3049	0/0:13,0:13:39.13:0,39,2397	0/0:25,0:25:66.21:0,66,3977	0/0:13,0:13:33.11:0,33,2125	0/0:12,0:12:14.97:0,15,836	0/0:15,0:14:27.09:0,27,1659	0/0:9,0:9:27.09:0,27,1649	1/1:3,5:8:21.07:830,21,0	0/0:14,0:14:27.04:0,27,1658	0/0:28,0:27:57.20:0,57,3110	0/0:15,0:13:27.09:0,27,1634	0/0:24,0:24:66.20:0,66,3690	0/0:23,0:23:63.22:0,63,3722	0/0:2,0:2:3.01:0,3,197	0/0:21,0:21:60.21:0,60,3566	0/0:18,0:17:45.15:0,45,2611	0/0:12,0:12:30.10:0,30,1829	0/0:21,0:21:39.13:0,39,2457	0/0:18,0:17:39.13:0,39,2475	0/0:22,0:22:36.04:0,36,2071	0/0:5,0:5:12.04:0,12,781
chr10	25670237	.	A	AT	11925.05	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-5.583;DP=450;FS=11.502;HRun=8;HaplotypeScore=38.2976;InbreedingCoeff=0.8696;MQ=76.86;MQ0=0;MQRankSum=-3.316;QD=27.73;ReadPosRankSum=4.360;VQSLOD=4.3371;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,14:15:33.10:381,33,0	1/1:1,3:4:9.03:104,9,0	0/0:9,0:9:15:0,15,136	0/0:11,0:11:20.93:0,21,180	1/1:1,14:15:11.65:388,12,0	1/1:3,13:16:36.11:412,36,0	1/1:2,16:18:45.13:519,45,0	1/1:4,19:23:54.16:623,54,0	1/1:0,16:16:39.12:450,39,0	1/1:2,13:15:36.11:415,36,0	1/1:0,19:19:57.17:658,57,0	1/1:3,17:20:17.67:456,18,0	1/1:4,10:13:27.04:293,27,0	1/1:0,17:17:48.14:554,48,0	1/1:5,12:17:5.61:304,6,0	1/1:1,17:19:54.16:622,54,0	1/1:1,20:21:54.16:623,54,0	1/1:5,17:22:48.14:554,48,0	1/1:3,14:17:20.55:462,21,0	1/1:2,9:11:27.08:312,27,0	1/1:3,16:19:45.13:519,45,0	1/1:1,7:8:18.05:208,18,0	1/1:1,16:17:45.13:519,45,0	1/1:2,16:18:48.14:554,48,0	1/1:3,12:15:36.11:416,36,0	1/1:4,24:28:75.20:852,75,0	1/1:3,19:22:51.13:588,51,0	1/1:0,4:4:12.04:138,12,0
chr10	25670537	.	CA	C	803.45	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.946;DP=533;FS=7.120;HRun=4;HaplotypeScore=55.9526;InbreedingCoeff=0.9954;MQ=90.82;MQ0=0;MQRankSum=-2.262;QD=28.69;ReadPosRankSum=3.426;VQSLOD=3.1674;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,117,1621	0/0:11,0:11:33.11:0,33,462	0/0:24,0:24:63.19:0,63,834	0/0:18,0:18:45.61:0,46,575	0/0:21,0:21:60.18:0,60,808	0/0:18,0:18:51.08:0,51,670	0/0:9,0:9:27.09:0,27,378	0/0:24,0:24:66.20:0,66,882	0/0:18,0:18:54.17:0,54,740	0/0:10,0:10:24.08:0,24,336	0/0:15,0:15:42.14:0,42,588	0/0:24,0:24:69.21:0,69,933	0/0:19,0:19:54.18:0,54,755	0/0:22,0:22:63.20:0,63,865	1/1:0,28:27:75.23:898,75,0	0/0:24,0:24:72.22:0,72,976	0/0:22,0:22:63.21:0,63,882	0/0:19,0:19:57.19:0,57,798	0/0:21,0:21:54.18:0,54,756	0/0:14,0:14:36.11:0,36,489	0/0:16,0:15:45.14:0,45,613	0/0:11,0:11:30.10:0,30,419	0/0:13,0:13:36.09:0,36,465	0/0:16,0:16:48.16:0,48,672	0/0:17,0:17:48.16:0,48,672	0/0:28,0:28:75.25:0,75,1050	0/0:20,0:19:57.19:0,57,798	0/0:10,0:10:30.10:0,30,420
chr10	25671768	.	C	CACAT	28463.82	PASS	AB=0.552;AC=51;AF=0.911;AN=56;BaseQRankSum=-7.014;DP=805;FS=0.000;HRun=0;HaplotypeScore=108.9918;InbreedingCoeff=0.7182;MQ=62.01;MQ0=7;MQRankSum=-1.102;QD=39.10;ReadPosRankSum=5.343;VQSLOD=5.0333;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:19,21:43:48.16:1173,48,0	1/1:2,13:15:33.11:806,33,0	0/0:37,0:18:22.54:0,23,312	0/0:39,0:22:19.14:0,19,305	1/1:5,20:28:39.13:953,39,0	1/1:12,25:39:69.13:1686,69,0	1/1:8,12:21:24.08:586,24,0	1/1:19,14:37:54.08:802,54,0	1/1:2,21:25:36.12:880,36,0	1/1:9,21:34:72.14:1506,72,0	1/1:3,22:25:45.15:1100,45,0	1/1:11,7:20:24.08:569,24,0	1/1:3,34:38:63.22:1538,63,0	1/1:4,14:18:39.13:949,39,0	1/1:6,0:26:17.99:200,18,0	1/1:10,24:35:40.22:1373,40,0	1/1:3,8:12:21.07:513,21,0	1/1:3,12:15:27.09:659,27,0	1/1:10,10:23:40.32:647,40,0	1/1:3,27:31:69.24:1686,69,0	1/1:6,32:39:75.26:1833,75,0	1/1:5,27:31:57.20:1392,57,0	1/1:11,17:33:45.15:1076,45,0	1/1:5,19:25:54.19:1319,54,0	1/1:5,20:26:1.90:1124,2,0	1/1:5,24:29:72.18:1484,72,0	1/1:6,32:42:28.94:1770,29,0	0/1:3,13:16:10.14:841,0,10
chr10	25672322	.	GA	G	10508.07	PASS	AB=0.548;AC=49;AF=0.875;AN=56;BaseQRankSum=-0.932;DP=520;FS=4.614;HRun=10;HaplotypeScore=53.2584;InbreedingCoeff=0.7642;MQ=70.31;MQ0=0;MQRankSum=-0.204;QD=21.31;ReadPosRankSum=3.006;VQSLOD=5.9073;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,34:37:95.96:833,96,0	1/1:0,7:7:21:182,21,0	0/0:9,0:9:2.38:0,2,110	0/0:9,0:9:5.88:0,6,107	1/1:10,22:32:62.96:547,63,0	1/1:3,16:19:28.44:394,28,0	1/1:3,19:22:47.99:417,48,0	1/1:9,18:27:53.93:468,54,0	1/1:6,14:20:41.97:365,42,0	1/1:1,21:22:62.99:547,63,0	1/1:2,20:22:50.97:443,51,0	1/1:1,16:17:44.99:391,45,0	1/1:2,20:22:62.99:547,63,0	1/1:1,8:9:20.98:182,21,0	0/0:9,0:9:24.06:0,24,258	1/1:1,18:19:50.99:443,51,0	1/1:3,16:19:46.81:396,47,0	1/1:0,11:11:29.99:260,30,0	1/1:4,18:22:56.96:487,57,0	0/1:4,19:23:3.37:432,0,3	1/1:0,10:10:29.99:260,30,0	1/1:3,10:13:29.99:260,30,0	1/1:2,20:22:57.46:496,57,0	1/1:1,15:16:41.99:365,42,0	1/1:4,14:18:41.98:365,42,0	1/1:3,24:27:71.96:620,72,0	1/1:4,26:30:71.98:625,72,0	1/1:0,7:7:21:182,21,0
chr10	25672518	.	GAGAAAAGAAA	G	1532.43	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.721;DP=672;FS=15.205;HRun=0;HaplotypeScore=192.2978;InbreedingCoeff=0.9836;MQ=75.25;MQ0=0;MQRankSum=-6.967;QD=51.08;ReadPosRankSum=-0.214;VQSLOD=2.4525;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:57:99:0,144,6866	0/0:6,0:6:15.04:0,15,642	0/0:29,0:23:57.42:0,57,2138	0/0:36,0:29:49.58:0,50,1627	0/0:25,0:25:60.19:0,60,2754	0/0:16,0:16:45.15:0,45,2299	0/0:20,0:20:54.14:0,54,2262	0/0:36,0:36:78.25:0,78,3427	0/0:16,0:16:42.14:0,42,1797	0/0:20,0:20:51.17:0,51,2104	0/0:23,0:23:54.17:0,54,2526	0/0:30,0:30:75.24:0,75,3577	0/0:28,0:28:69.22:0,69,3340	0/0:14,0:14:30.09:0,30,1402	1/1:3,27:30:54.19:1627,54,0	0/0:20,0:20:57.18:0,57,2721	0/0:21,0:21:54.17:0,54,2484	0/0:21,0:21:54.19:0,54,2724	0/0:20,0:20:42.14:0,42,2020	0/0:20,0:20:54.12:0,54,2391	0/0:20,0:20:51.15:0,51,2225	0/0:25,0:25:66.20:0,66,3040	0/0:20,0:20:51.14:0,51,2168	0/0:18,0:18:45.15:0,45,2110	0/0:36,0:36:93.32:0,93,4478	0/0:27,0:27:72.24:0,72,3275	0/0:26,0:24:66.23:0,66,3218	0/0:11,0:11:33.11:0,33,1696
chr10	25673288	.	TTCTCTCTC	T	568.73	PASS	AC=4;AF=0.077;AN=52;BaseQRankSum=1.412;DP=231;FS=0.000;HRun=0;HaplotypeScore=69.7496;InbreedingCoeff=0.4898;MQ=103.45;MQ0=1;MQRankSum=-1.483;QD=17.23;ReadPosRankSum=-1.046;VQSLOD=2.1120;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:15.05:0,15,325	0/0:2,0:2:3:0,3,25	0/0:25,0:21:18.32:0,18,361	0/0:24,0:15:16.77:0,17,250	0/0:10,0:10:15.04:0,15,419	0/0:4,0:4:11.97:0,12,291	0/0:4,0:4:12.03:0,12,283	1/1:12,10:21:28.04:626,28,0	0/0:7,0:7:15.05:0,15,399	0/0:4,0:4:12.04:0,12,358	./.	0/0:2,0:2:3.01:0,3,100	0/0:4,0:4:9.03:0,9,289	0/0:2,0:2:6.02:0,6,215	0/0:2,0:2:3.01:0,3,75	0/0:8,0:8:11.80:0,12,171	1/1:9,0:11:3.01:49,3,0	0/0:16,0:15:33.11:0,33,888	0/0:10,0:10:26.10:0,26,692	0/0:14,0:14:21.07:0,21,647	./.	0/0:6,0:6:9.03:0,9,300	0/0:3,0:3:9.03:0,9,299	0/0:4,0:4:6.02:0,6,173	0/0:7,0:7:12.03:0,12,327	0/0:5,0:5:15.04:0,15,273	0/0:15,0:15:33.09:0,33,964	0/0:3,0:3:6.01:0,6,121
chr10	25673343	.	CATATATATATAT	C	1638.24	PASS	AB=0.854;AC=36;AF=0.818;AN=44;BaseQRankSum=-2.195;DP=113;FS=1.384;HRun=0;HaplotypeScore=41.4419;InbreedingCoeff=0.0260;MQ=74.12;MQ0=5;MQRankSum=1.507;QD=19.27;ReadPosRankSum=-0.937;VQSLOD=1.0219;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:3,2:5:6:72,6,0	./.	1/1:6,0:3:2.51:11,3,0	./.	./.	1/1:2,1:2:3.01:94,3,0	1/1:3,0:3:6.01:75,6,0	0/1:13,0:11:90.34:236,0,90	1/1:1,0:1:3.01:48,3,0	1/1:2,0:2:6.02:104,6,0	1/1:2,0:1:3.01:40,3,0	0/1:0,7:7:0:0,0,0	1/1:2,0:2:3.01:49,3,0	0/0:2,5:7:2.97:0,3,20	./.	1/1:2,0:2:3.01:56,3,0	0/1:6,0:6:63.84:64,0,83	0/1:10,1:11:17.74:294,0,18	1/1:0,5:5:14.87:199,15,0	1/1:1,0:1:3.01:49,3,0	1/1:1,0:1:3.01:48,3,0	./.	1/1:1,0:1:3.01:46,3,0	./.	0/0:1,5:6:2.90:0,3,16	1/1:3,0:3:9.03:129,9,0	1/1:2,6:8:3.01:98,3,0	1/1:3,0:3:3.01:40,3,0
chr10	25673646	.	TGA	T	878.75	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.928;DP=541;FS=4.125;HRun=0;HaplotypeScore=63.1478;InbreedingCoeff=0.8991;MQ=84.86;MQ0=0;MQRankSum=-3.695;QD=32.55;ReadPosRankSum=-0.218;VQSLOD=5.1802;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:54.16:0,54,953	0/0:2,0:2:6.02:0,6,107	0/0:16,0:16:48.13:0,48,809	0/0:18,0:18:54.17:0,54,938	0/0:24,0:24:72.25:0,72,1379	0/0:33,0:33:96.27:0,96,1720	0/0:13,0:13:36.11:0,36,645	0/0:30,0:30:87.27:0,87,1530	0/0:18,0:18:51.13:0,51,870	0/0:31,0:31:93.27:0,93,1672	0/0:10,0:10:27.08:0,27,488	0/0:23,0:23:69.22:0,69,1281	0/0:24,0:24:72.23:0,72,1357	0/0:10,0:10:27.09:0,27,512	1/1:1,26:27:69.05:974,69,0	0/0:27,0:27:78.25:0,78,1473	0/0:13,0:13:33.11:0,33,624	0/0:22,0:22:66.19:0,66,1229	0/0:18,0:18:54.18:0,54,996	0/0:16,0:16:48.16:0,48,910	0/0:16,0:16:45.14:0,45,825	0/0:12,0:12:36.10:0,36,639	0/0:18,0:18:51.13:0,51,885	0/0:10,0:10:30.10:0,30,579	0/0:10,0:10:30.10:0,30,579	0/0:30,0:30:90.30:0,90,1689	0/0:43,0:42:99:0,126,2253	0/0:8,0:8:21.05:0,21,371
chr10	25675085	.	A	AGTC	39977.15	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-9.810;DP=758;FS=7.043;HRun=0;HaplotypeScore=92.4119;InbreedingCoeff=0.9956;MQ=80.98;MQ0=0;MQRankSum=-10.715;QD=56.46;ReadPosRankSum=5.393;VQSLOD=7.0626;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,41:43:99:2228,100,0	1/1:1,11:12:33.11:746,33,0	0/0:27,0:27:63.21:0,63,1009	0/0:23,0:23:59.87:0,60,836	1/1:4,35:40:96.33:2115,96,0	1/1:3,20:25:60.21:1347,60,0	1/1:4,16:20:48.16:1074,48,0	1/1:8,16:25:66.11:1214,66,0	1/1:3,32:36:87.30:1942,87,0	1/1:4,27:34:87.29:1879,87,0	1/1:3,26:30:75.26:1662,75,0	1/1:0,26:26:75.26:1684,75,0	1/1:1,23:24:69.24:1560,69,0	1/1:2,30:33:78.27:1749,78,0	1/1:1,33:34:96.33:2171,96,0	1/1:1,24:27:66.23:1480,66,0	1/1:2,25:27:66.23:1479,66,0	1/1:1,10:11:33.11:747,33,0	1/1:5,17:22:63.22:1404,63,0	1/1:3,24:27:72.25:1585,72,0	1/1:3,24:28:54.19:1133,54,0	1/1:3,30:33:84.29:1843,84,0	1/1:2,25:28:72.25:1563,72,0	1/1:2,28:30:72.72:1631,73,0	1/1:1,19:21:60.21:1305,60,0	1/1:1,31:34:99:2170,99,0	1/1:5,25:30:84.29:1872,84,0	1/1:2,6:8:18.06:397,18,0
chr10	25676767	.	C	CT	5718.61	PASS	AB=0.632;AC=41;AF=0.732;AN=56;BaseQRankSum=-6.140;DP=442;FS=3.478;HRun=10;HaplotypeScore=58.8264;InbreedingCoeff=0.6742;MQ=68.67;MQ0=2;MQRankSum=0.118;QD=18.33;ReadPosRankSum=2.488;VQSLOD=5.8077;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:26:43.03:0,43,329	1/1:2,4:6:8.83:96,9,0	0/0:16,0:11:14.30:0,14,99	0/0:14,0:11:7.58:0,8,92	1/1:6,18:25:32.25:506,32,0	1/1:5,5:10:9.02:96,9,0	0/1:5,6:10:3.56:171,0,4	0/0:31,0:32:64.90:0,65,521	1/1:5,5:10:15.04:160,15,0	1/1:8,14:23:4.67:437,5,0	1/1:2,7:9:15.04:160,15,0	0/1:2,3:5:12.55:76,0,13	1/1:5,9:14:21.05:223,21,0	1/1:6,4:10:3.75:140,4,0	0/0:16,0:16:35.95:0,36,295	1/1:7,14:20:42.07:436,42,0	0/0:26,0:26:68.90:0,69,566	1/1:6,18:22:50.94:515,51,0	1/1:7,13:18:21.62:389,22,0	0/1:10,15:25:4.33:331,0,4	1/1:4,6:10:12.03:128,12,0	1/1:2,5:7:9.02:96,9,0	1/1:2,8:10:21.05:224,21,0	1/1:3,7:9:21.05:224,21,0	1/1:5,11:16:30.04:307,30,0	1/1:6,16:23:45.88:494,46,0	1/1:2,12:14:32.98:335,33,0	1/1:1,5:7:17.88:174,18,0
chr10	25677536	.	C	CA	1034.54	PASS	AB=0.939;AC=36;AF=0.643;AN=56;BaseQRankSum=-0.823;DP=537;FS=6.669;HRun=14;HaplotypeScore=124.9989;InbreedingCoeff=0.0586;MQ=64.82;MQ0=6;MQRankSum=-0.525;QD=2.28;ReadPosRankSum=0.990;VQSLOD=0.4325;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:31:32.73:0,33,124	1/1:13,0:13:7.48:22,7,0	0/1:7,0:5:14.85:15,0,37	0/0:16,0:11:11.28:0,11,64	0/0:19,0:19:4.38:0,4,26	1/1:14,0:14:0.90:6,1,0	0/1:16,0:16:7.83:19,0,8	0/1:17,17:34:0.40:266,0,0	1/1:19,0:19:2.66:29,3,0	0/1:23,0:22:9.79:10,0,13	0/1:17,0:17:2.31:2,0,2	1/1:15,0:15:3.81:13,4,0	1/1:14,0:14:0.13:4,0,0	0/1:24,0:23:6.53:11,0,7	0/1:7,13:21:13.93:263,0,14	0/1:21,0:21:8.35:15,0,8	1/1:9,21:29:41.07:380,41,0	1/1:25,0:24:12.37:33,12,0	1/1:7,0:7:4.62:11,5,0	1/1:29,0:29:0.03:20,0,0	0/1:14,0:14:5.63:6,0,8	0/1:14,0:14:3.04:3,0,15	0/0:17,0:17:4.63:0,5,34	0/1:25,0:23:9.21:9,0,14	0/1:13,0:13:2.28:2,0,14	1/1:17,0:17:5.48:17,5,0	1/1:33,0:32:3.36:21,3,0	1/1:6,0:6:1.25:3,1,0
chr10	25677549	.	AAT	A	3764.55	PASS	AB=0.964;AC=36;AF=0.643;AN=56;BaseQRankSum=1.980;DP=542;FS=3.259;HRun=0;HaplotypeScore=105.7226;InbreedingCoeff=0.3270;MQ=68.73;MQ0=2;MQRankSum=2.435;QD=9.48;ReadPosRankSum=3.117;VQSLOD=3.2523;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:32:71.44:0,71,561	1/1:14,1:15:30.91:174,31,0	0/0:12,0:9:26.51:0,27,253	0/0:18,0:13:23.74:0,24,315	0/1:17,1:18:32.10:145,0,32	0/1:11,1:12:27.78:81,0,28	0/1:16,1:17:2.68:166,0,3	0/0:32,0:32:93.30:0,93,1032	1/1:16,3:19:8.95:136,9,0	1/1:23,1:24:38.16:377,38,0	1/1:18,0:18:8.44:133,8,0	1/1:16,1:17:21.92:199,22,0	1/1:12,1:13:1.03:116,1,0	1/1:23,0:23:33.05:280,33,0	0/0:21,0:21:54.07:0,54,690	0/1:22,0:22:19.72:185,0,20	0/0:29,0:28:60:0,60,708	1/1:23,2:25:28.19:203,28,0	0/1:13,0:13:9.77:170,0,10	0/1:24,1:25:2.29:193,0,2	1/1:12,1:13:6.74:114,7,0	0/1:14,0:14:12.17:71,0,12	0/1:13,1:14:13.82:143,0,14	1/1:28,2:28:11.77:172,12,0	1/1:17,0:17:2.90:127,3,0	1/1:15,0:15:27.17:173,27,0	1/1:27,4:31:5.01:369,5,0	1/1:2,0:2:5.74:37,6,0
chr10	25677550	.	AT	A	9176.49	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-5.032;DP=501;FS=7.989;HRun=1;HaplotypeScore=74.5595;InbreedingCoeff=0.9732;MQ=70.26;MQ0=2;MQRankSum=-0.740;QD=25.00;ReadPosRankSum=0.774;VQSLOD=4.1249;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:31:26.89:0,27,265	1/1:2,11:13:32.99:405,33,0	0/0:12,0:9:26.22:0,26,211	0/0:18,0:13:21.30:0,21,241	1/1:12,4:16:33.32:303,33,0	1/1:8,3:11:21.59:255,22,0	1/1:11,6:17:44.93:468,45,0	0/0:30,0:30:79.89:0,80,696	1/1:4,15:19:23.94:279,24,0	1/1:3,20:23:64.70:655,65,0	1/1:3,12:15:32.73:308,33,0	1/1:7,8:15:42.05:503,42,0	1/1:1,10:11:17.99:216,18,0	1/1:16,7:23:59.32:664,59,0	0/0:20,0:20:50.95:0,51,467	1/1:10,11:21:51.92:604,52,0	0/0:22,0:21:50.82:0,51,418	1/1:3,20:23:43.64:579,44,0	1/1:8,3:11:33.03:335,33,0	1/1:3,22:25:55.66:627,56,0	1/1:2,11:13:20.10:261,20,0	1/1:1,11:12:24.36:260,24,0	1/1:9,4:13:28.98:281,29,0	1/1:4,23:26:37.78:499,38,0	1/1:10,5:15:41.40:386,41,0	1/1:0,14:14:39:421,39,0	1/1:13,15:28:74.02:803,74,0	1/1:0,2:2:6.01:65,6,0
chr10	25678517	.	T	TG	18040.84	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-12.671;DP=602;FS=16.811;HRun=4;HaplotypeScore=59.9214;InbreedingCoeff=0.9996;MQ=79.24;MQ0=0;MQRankSum=-4.317;QD=36.45;ReadPosRankSum=3.447;VQSLOD=3.2898;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,37:42:99:1354,99,0	1/1:0,14:14:42.14:574,42,0	0/0:18,0:18:45.13:0,45,510	0/0:22,0:22:54.13:0,54,599	1/1:2,32:34:90.30:1231,90,0	1/1:3,22:26:66.22:893,66,0	1/1:0,12:12:33.11:451,33,0	0/0:20,0:20:51.10:0,51,557	1/1:1,16:17:42.14:575,42,0	1/1:2,14:16:42.14:575,42,0	1/1:1,26:27:78.26:1058,78,0	1/1:2,20:22:57.19:780,57,0	1/1:3,17:20:48.16:657,48,0	1/1:0,26:26:75.25:1026,75,0	0/0:22,0:22:60.17:0,60,681	1/1:0,18:18:48.16:657,48,0	0/0:25,0:25:69.20:0,69,782	1/1:1,11:12:33.10:436,33,0	1/1:3,16:19:51.17:697,51,0	1/1:1,25:26:72.24:985,72,0	1/1:1,12:13:36.12:492,36,0	1/1:1,24:25:72.24:983,72,0	1/1:2,17:18:51.17:692,51,0	1/1:2,21:23:63.21:862,63,0	1/1:1,20:20:60.20:821,60,0	1/1:1,17:18:51.17:697,51,0	1/1:2,27:29:78.26:1067,78,0	1/1:4,12:16:28.30:481,28,0
chr10	25679210	.	T	TGAGAAGGGTTAAAGATGAAAA	1945.38	PASS	AB=0.690;AC=26;AF=0.929;AN=28;BaseQRankSum=-1.948;DP=40;FS=18.524;HRun=0;HaplotypeScore=39.8885;InbreedingCoeff=-0.2229;MQ=139.34;MQ0=0;MQRankSum=-2.282;QD=55.58;ReadPosRankSum=-1.336;VQSLOD=0.6906;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,0:3:6.02:117,6,0	1/1:2,0:2:6.02:84,6,0	0/1:3,0:6:40.15:401,0,40	0/1:3,1:5:54.84:530,0,55	1/1:1,0:1:3.01:50,3,0	./.	./.	1/1:1,0:1:3:26,3,0	./.	1/1:1,0:1:3:27,3,0	./.	./.	./.	./.	./.	./.	./.	1/1:2,0:2:3.01:48,3,0	1/1:2,0:2:2.99:24,3,0	1/1:3,0:3:9.03:302,9,0	1/1:3,0:3:8.97:86,9,0	./.	1/1:1,0:1:3.01:74,3,0	./.	1/1:4,0:4:6.02:240,6,0	./.	1/1:1,0:1:3:25,3,0	./.
chr10	25680764	.	AGT	A	685.63	PASS	AB=0.885;AC=18;AF=0.321;AN=56;BaseQRankSum=6.394;DP=197;FS=0.000;HRun=0;HaplotypeScore=47.9660;InbreedingCoeff=-0.3726;MQ=79.58;MQ0=2;MQRankSum=-6.385;QD=6.29;ReadPosRankSum=0.188;VQSLOD=2.5916;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:8:3.63:0,4,383	0/1:1,1:2:38.88:39,0,52	0/0:17,1:11:24.45:0,24,340	0/0:29,0:16:18.63:0,19,203	0/1:7,3:10:99:104,0,206	0/0:4,0:4:12.04:0,12,231	0/0:2,0:2:6.02:0,6,116	0/1:12,1:12:15.50:16,0,491	0/1:5,0:5:25.64:26,0,216	0/1:9,1:10:47.45:47,0,428	0/1:7,0:7:35.86:36,0,270	0/1:3,0:3:31.41:31,0,107	0/1:2,0:2:35.31:35,0,51	0/0:2,0:2:6.02:0,6,113	0/1:2,1:3:48.66:75,0,49	0/1:3,0:3:12.24:12,0,52	0/0:10,0:10:24.08:0,24,451	0/0:5,0:5:15.05:0,15,290	0/1:1,1:2:33.47:33,0,52	0/1:7,1:8:8.13:8,0,269	0/0:6,0:6:18.06:0,18,347	0/1:5,0:5:33.54:34,0,162	0/1:6,3:9:75.02:75,0,178	0/0:2,0:2:6.02:0,6,108	0/1:14,0:14:61.33:61,0,523	0/1:8,1:10:99:117,0,262	1/1:0,2:3:7.27:94,7,0	0/0:2,0:2:6.02:0,6,116
chr10	25680801	.	AAGGAGAGGAGAGGAG	A	381.35	PASS	AB=1.000;AC=16;AF=0.500;AN=32;BaseQRankSum=-0.892;DP=250;FS=3.010;HRun=0;HaplotypeScore=75.3272;InbreedingCoeff=0.1420;MQ=65.08;MQ0=31;MQRankSum=-0.400;QD=2.76;ReadPosRankSum=1.200;VQSLOD=1.6305;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:8:5.50:0,6,44	./.	./.	0/1:58,0:21:0:0,0,0	1/1:10,0:8:2.99:24,3,0	0/1:11,0:10:85.19:85,0,106	1/1:6,0:5:5.75:32,6,0	1/1:14,0:11:3:25,3,0	./.	./.	0/0:7,0:7:3.01:0,3,37	./.	./.	./.	./.	0/0:2,0:2:2.68:0,3,11	1/1:7,5:12:6.02:246,6,0	1/1:8,0:6:2.99:24,3,0	0/1:5,0:3:17.98:18,0,117	0/0:8,0:7:0:0,0,0	0/1:11,0:10:17.40:17,0,32	0/0:5,0:5:6.02:0,6,157	./.	0/0:6,0:4:2.65:0,3,33	./.	./.	1/1:3,0:3:2.52:19,3,0	./.
chr10	25680891	.	A	AG	925.24	PASS	AB=0.846;AC=13;AF=0.232;AN=56;BaseQRankSum=11.538;DP=471;FS=156.160;HRun=1;HaplotypeScore=126.7377;InbreedingCoeff=-0.3156;MQ=69.77;MQ0=6;MQRankSum=-8.647;QD=4.26;ReadPosRankSum=-1.732;VQSLOD=0.0491;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:16,1:17:9.79:10,0,392	0/0:5,0:5:12.04:0,12,156	0/0:28,0:21:31:0,31,440	0/0:46,0:24:17.49:0,17,256	0/1:13,6:19:90.72:91,0,340	0/0:12,0:12:21.20:0,21,413	0/0:15,0:15:36.12:0,36,467	0/0:32,0:32:93.29:0,93,1182	0/1:4,1:5:26.82:27,0,140	0/1:20,3:23:55.36:55,0,492	0/1:11,3:14:80.79:81,0,349	0/0:13,0:13:36.12:0,36,466	0/1:14,3:17:32.22:32,0,488	0/0:11,0:11:12.15:0,12,296	0/0:17,0:17:33.15:0,33,565	0/1:7,1:8:17.34:17,0,248	0/0:11,0:11:30.07:0,30,371	0/0:17,0:17:47.87:0,48,622	0/0:10,0:10:30.09:0,30,377	0/1:13,3:16:63.01:63,0,349	0/0:9,0:9:27.09:0,27,350	0/1:12,3:15:98.99:99,0,330	0/1:10,3:13:78.88:79,0,350	0/0:12,1:12:1.66:0,2,392	0/1:22,13:35:99:466,0,603	0/1:17,2:19:26.89:27,0,579	0/1:14,2:16:30.71:31,0,442	0/0:10,0:10:30.05:0,30,370
chr10	25687693	.	A	AC	29303.42	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-11.189;DP=735;FS=7.036;HRun=0;HaplotypeScore=63.1823;InbreedingCoeff=0.9891;MQ=77.22;MQ0=0;MQRankSum=-5.947;QD=44.33;ReadPosRankSum=4.510;VQSLOD=4.9499;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,41:41:99:1808,114,0	1/1:0,14:14:42.14:671,42,0	0/0:21,0:22:57.07:0,57,733	0/0:19,0:18:44.51:0,45,528	1/1:0,30:30:87.30:1391,87,0	1/1:0,29:29:84.29:1343,84,0	1/1:0,20:20:54.18:863,54,0	1/1:0,19:19:57.15:841,57,0	1/1:1,33:34:78.27:1247,78,0	1/1:0,25:25:75.26:1199,75,0	1/1:0,26:26:75.26:1199,75,0	1/1:0,34:34:87.30:1389,87,0	1/1:0,30:30:87.30:1389,87,0	1/1:0,34:34:90.18:1437,90,0	0/0:33,0:33:96.32:0,96,1342	1/1:0,29:29:78.27:1247,78,0	1/1:0,43:43:99:1822,114,0	1/1:0,22:22:60.20:959,60,0	1/1:1,19:20:57.19:909,57,0	1/1:0,25:25:75.26:1199,75,0	1/1:1,45:46:99:2014,126,0	1/1:1,17:18:48.16:765,48,0	1/1:0,21:21:57.19:911,57,0	1/1:0,22:22:63.21:1007,63,0	1/1:0,25:25:72.25:1151,72,0	1/1:0,23:23:69.24:1101,69,0	1/1:1,26:26:78.27:1247,78,0	1/1:0,4:4:12.04:192,12,0
chr10	25691217	.	TAC	T	281.38	PASS	AB=0.937;AC=6;AF=0.107;AN=56;BaseQRankSum=2.518;DP=511;FS=12.110;HRun=0;HaplotypeScore=93.3143;InbreedingCoeff=0.3144;MQ=78.38;MQ0=0;MQRankSum=-1.385;QD=2.71;ReadPosRankSum=2.157;VQSLOD=1.2229;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:26,4:30:6.87:220,0,7	0/0:7,0:7:9.90:0,10,58	0/0:24,0:22:48.69:0,49,591	0/0:17,0:14:9.85:0,10,276	0/1:11,1:12:0.77:1,0,127	0/0:14,0:14:28.93:0,29,164	0/0:25,0:25:23.01:0,23,219	0/1:26,0:26:25.13:25,0,270	0/0:20,0:20:26.68:0,27,165	0/0:17,0:17:31.39:0,31,211	0/0:12,0:12:21.42:0,21,179	0/0:19,0:19:24.77:0,25,198	0/0:20,0:21:29.99:0,30,204	0/0:23,0:23:51.65:0,52,305	0/0:16,0:16:42.01:0,42,579	0/0:19,0:19:34.49:0,34,184	1/1:19,1:20:9.48:143,9,0	0/0:9,0:9:20.29:0,20,111	0/0:16,0:16:15.33:0,15,150	0/0:10,0:10:26.42:0,26,205	0/0:24,0:23:30.99:0,31,199	0/0:15,0:15:32.46:0,32,191	0/0:19,0:19:27.36:0,27,156	0/0:35,0:35:56.64:0,57,418	0/1:15,0:16:1.59:2,0,172	0/0:12,0:12:22.55:0,23,141	0/0:24,1:25:26.36:0,26,260	0/0:7,0:8:8.39:0,8,48
chr10	25691220	.	AC	A	5530.43	PASS	AB=0.726;AC=48;AF=0.857;AN=56;BaseQRankSum=-2.382;DP=517;FS=0.000;HRun=11;HaplotypeScore=72.3330;InbreedingCoeff=0.4579;MQ=80.39;MQ0=0;MQRankSum=-1.530;QD=11.74;ReadPosRankSum=4.670;VQSLOD=4.5554;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,0:30:38.42:112,38,0	1/1:2,5:7:8.98:74,9,0	0/0:29,0:25:27.97:0,28,322	0/1:19,0:15:7.29:7,0,91	1/1:4,8:12:25.95:195,26,0	1/1:2,12:14:23.96:197,24,0	1/1:2,19:24:45.06:338,45,0	1/1:13,1:27:29.10:98,29,0	1/1:4,13:18:32:252,32,0	1/1:8,10:19:33.66:252,34,0	0/1:6,5:11:1.95:76,0,2	1/1:12,5:19:48.83:364,49,0	1/1:7,12:19:29.84:237,30,0	1/1:6,15:21:38.94:320,39,0	0/0:14,3:17:8.38:0,8,265	1/1:2,16:18:38.95:320,39,0	1/1:3,0:20:30.55:88,31,0	1/1:2,9:11:20.96:172,21,0	1/1:9,5:15:22.97:173,23,0	0/1:3,7:10:7.50:83,0,8	1/1:6,16:23:25.72:311,26,0	1/1:8,6:14:29.90:237,30,0	1/1:7,12:19:33.83:272,34,0	1/1:12,21:36:72.01:558,72,0	0/1:7,10:17:8.99:129,0,9	1/1:4,9:13:26.92:215,27,0	1/1:9,17:26:46.90:375,47,0	1/1:1,7:8:8.99:74,9,0
chr10	25694808	.	T	TTA	21057.73	PASS	AB=0.538;AC=49;AF=0.875;AN=56;BaseQRankSum=-8.197;DP=571;FS=6.928;HRun=0;HaplotypeScore=62.5529;InbreedingCoeff=0.8044;MQ=71.07;MQ0=5;MQRankSum=-1.652;QD=39.96;ReadPosRankSum=4.002;VQSLOD=6.9054;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,24:23:63.17:1098,63,0	1/1:0,8:8:18.06:335,18,0	0/0:16,0:11:32.30:0,32,384	0/0:8,0:8:21.07:0,21,284	1/1:0,28:32:87.01:1349,87,0	1/1:0,20:22:36.31:932,36,0	1/1:2,14:20:47.95:775,48,0	1/1:4,0:24:38.91:320,39,0	1/1:0,19:20:48.16:874,48,0	1/1:1,30:32:93.24:1559,93,0	1/1:2,18:22:51.09:890,51,0	1/1:2,14:16:39.13:714,39,0	1/1:3,14:19:26.88:553,27,0	1/1:0,21:22:57.20:1060,57,0	0/0:20,0:20:57.08:0,57,721	1/1:0,18:18:48.16:894,48,0	1/1:0,0:20:49.34:267,49,0	1/1:1,16:18:20.20:651,20,0	1/1:2,16:19:54.03:878,54,0	1/1:0,31:34:90.12:1464,90,0	1/1:0,5:6:3.01:56,3,0	1/1:2,12:15:28.43:585,28,0	1/1:0,27:27:62.76:1131,63,0	1/1:0,10:12:30.10:520,30,0	1/1:0,29:30:63.11:1132,63,0	1/1:1,31:34:99:1602,100,0	1/1:1,25:25:66.23:1209,66,0	0/1:1,6:7:7.79:208,0,8
chr10	25696271	.	CT	C	12540.64	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=10.178;DP=435;FS=22.718;HRun=1;HaplotypeScore=43.4566;InbreedingCoeff=0.9164;MQ=56.42;MQ0=8;MQRankSum=6.061;QD=37.77;ReadPosRankSum=1.912;VQSLOD=2.8834;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,19:19:51.17:713,51,0	1/1:0,8:8:24.08:336,24,0	0/0:17,0:2:6.02:0,6,97	0/0:13,0:1:3.01:0,3,48	1/1:2,18:20:60.20:838,60,0	1/1:1,10:11:24.06:318,24,0	1/1:0,15:15:39.13:546,39,0	0/0:39,0:38:99:0,114,1799	1/1:0,11:11:33.11:462,33,0	1/1:0,20:20:60.20:838,60,0	1/1:0,11:11:30.10:420,30,0	1/1:0,12:12:33.11:462,33,0	1/1:0,13:13:33.11:462,33,0	1/1:0,9:9:27.05:356,27,0	0/0:12,0:12:36.11:0,36,553	1/1:0,11:11:30.10:420,30,0	0/0:22,0:22:60.20:0,60,957	1/1:4,18:22:9.29:682,9,0	1/1:1,20:20:51.15:709,51,0	1/1:1,14:15:45.15:628,45,0	1/1:0,14:14:39.13:546,39,0	1/1:0,8:8:24.08:324,24,0	1/1:1,12:12:33.11:462,33,0	1/1:0,12:12:27.05:356,27,0	1/1:2,27:29:84.22:1134,84,0	1/1:0,20:20:60.20:839,60,0	1/1:0,9:9:27.09:377,27,0	1/1:1,8:9:24.06:317,24,0
chr10	25696355	.	TA	T	6616.79	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=4.711;DP=326;FS=6.831;HRun=8;HaplotypeScore=42.9354;InbreedingCoeff=0.9144;MQ=70.96;MQ0=2;MQRankSum=-0.254;QD=26.47;ReadPosRankSum=5.890;VQSLOD=4.7397;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,11:12:33.03:312,33,0	1/1:0,2:2:6.01:58,6,0	0/0:16,0:14:25.18:0,25,284	0/0:9,0:7:5.93:0,6,54	1/1:2,20:22:60.06:572,60,0	1/1:0,10:10:30.05:290,30,0	1/1:2,6:8:15.02:145,15,0	0/0:27,0:26:63.16:0,63,729	1/1:0,7:7:21.03:203,21,0	1/1:0,15:15:45.07:435,45,0	1/1:0,13:13:36.06:348,36,0	1/1:0,6:6:18.03:174,18,0	1/1:1,8:9:27.03:256,27,0	1/1:0,7:7:21.03:202,21,0	0/0:4,0:4:12.04:0,12,145	1/1:1,7:8:21.03:203,21,0	0/0:20,0:20:57.15:0,57,675	1/1:4,16:20:51.05:485,51,0	1/1:0,13:13:39.06:377,39,0	1/1:1,11:12:33.05:319,33,0	1/1:1,10:11:30.04:290,30,0	1/1:0,5:5:15.02:145,15,0	1/1:1,5:6:15.02:145,15,0	1/1:0,3:3:9.01:87,9,0	1/1:3,12:15:36.05:348,36,0	1/1:3,14:17:42.07:406,42,0	1/1:1,14:15:44.94:420,45,0	1/1:1,13:14:42.06:400,42,0
chr10	25698164	.	T	TA	1166.65	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-7.381;DP=343;FS=7.924;HRun=5;HaplotypeScore=33.9986;InbreedingCoeff=0.8699;MQ=63.18;MQ0=1;MQRankSum=-1.362;QD=26.51;ReadPosRankSum=-2.518;VQSLOD=1.3053;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:63.15:0,63,675	0/0:8,0:8:21.05:0,21,225	0/0:12,0:10:21.04:0,21,226	0/0:8,0:7:10.12:0,10,142	0/0:23,0:23:66.15:0,66,701	0/0:21,0:21:57.13:0,57,605	0/0:3,0:3:9.02:0,9,97	1/1:8,26:33:75.23:971,75,0	0/0:7,0:7:21.05:0,21,226	0/0:18,0:18:48.11:0,48,511	0/0:7,0:7:18.03:0,18,184	0/0:6,0:6:18.03:0,18,185	0/0:6,0:6:18.05:0,18,193	0/0:10,0:10:21.05:0,21,225	0/0:10,0:10:30.08:0,30,322	0/0:14,0:14:39.10:0,39,418	1/1:1,9:10:24.08:316,24,0	0/0:14,0:14:39.10:0,39,417	0/0:13,0:13:39.08:0,39,406	0/0:4,0:4:9.02:0,9,97	0/0:12,0:12:27.04:0,27,280	0/0:6,0:6:15.02:0,15,153	0/0:8,0:8:24.06:0,24,257	0/0:4,0:4:9.02:0,9,97	0/0:15,0:15:45.11:0,45,484	0/0:19,0:19:51.13:0,51,547	0/0:16,0:16:42.08:0,42,435	0/0:11,0:11:33.08:0,33,354
chr10	25698202	.	AGT	A	51.77	PASS	AB=0.784;AC=2;AF=0.036;AN=56;BaseQRankSum=4.403;DP=298;FS=1.625;HRun=0;HaplotypeScore=41.5123;InbreedingCoeff=-0.0621;MQ=67.15;MQ0=0;MQRankSum=-4.331;QD=1.44;ReadPosRankSum=-1.384;VQSLOD=1.3608;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:87.30:0,87,1762	0/0:3,0:3:9.03:0,9,183	0/0:9,0:8:24.08:0,24,442	0/0:5,0:5:15.04:0,15,244	0/0:18,0:18:54.18:0,54,1070	0/0:21,0:21:63.22:0,63,1276	0/0:2,0:2:6.02:0,6,122	0/1:21,6:25:99:106,0,1048	0/0:7,0:7:21.07:0,21,427	0/0:18,0:18:54.19:0,54,1097	0/0:9,0:9:27.09:0,27,545	0/0:5,0:5:15.05:0,15,300	0/0:8,0:8:24.08:0,24,488	0/0:7,0:7:21.07:0,21,414	0/0:8,0:8:24.08:0,24,487	0/0:9,0:9:27.09:0,27,544	0/1:6,3:9:34.52:35,0,282	0/0:11,0:11:30.10:0,30,609	0/0:9,0:9:27.09:0,27,549	0/0:5,0:5:15.05:0,15,305	0/0:3,0:3:9.03:0,9,179	0/0:1,0:1:3.01:0,3,61	0/0:4,0:4:12.04:0,12,244	0/0:1,0:1:3.01:0,3,61	0/0:15,0:15:45.15:0,45,914	0/0:18,0:17:54.19:0,54,1097	0/0:15,0:15:45.15:0,45,902	0/0:22,0:22:66.23:0,66,1272
chr10	25700073	.	GCT	G	450.63	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.413;DP=1007;FS=21.726;HRun=0;HaplotypeScore=170.9301;InbreedingCoeff=0.9987;MQ=63.69;MQ0=7;MQRankSum=-4.956;QD=11.86;ReadPosRankSum=-1.173;VQSLOD=1.8995;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:98.96:0,99,1550	0/0:18,0:18:47.81:0,48,765	0/0:37,0:21:52.48:0,52,908	0/0:40,0:27:74.89:0,75,946	0/0:30,0:30:47.99:0,48,915	0/0:21,0:21:60.13:0,60,979	0/0:48,0:48:99:0,122,2262	1/1:13,4:16:33.83:360,34,0	0/0:39,0:39:99:0,117,2098	0/0:53,0:53:99:0,153,2794	0/0:17,0:17:33:0,33,569	0/0:53,0:53:99:0,153,2757	0/0:45,0:45:99:0,113,2057	0/0:43,0:43:99:0,123,2071	0/0:35,0:35:99:0,99,1796	0/0:31,0:31:90.14:0,90,1420	1/1:18,3:21:27.25:212,27,0	0/0:27,0:27:81.15:0,81,1284	0/0:19,0:18:54.14:0,54,938	0/0:38,0:38:93.15:0,93,1629	0/0:117,0:116:99:0,298,5414	0/0:26,0:26:66.11:0,66,1093	0/0:22,0:22:51.16:0,51,923	0/0:73,0:73:99:0,187,3682	0/0:31,0:30:60.14:0,60,1109	0/0:39,0:39:98.44:0,98,1804	0/0:18,0:18:48.13:0,48,838	0/0:9,0:9:27.09:0,27,520
chr10	25700203	.	T	TC	499.74	PASS	AB=0.744;AC=3;AF=0.054;AN=56;BaseQRankSum=4.119;DP=1162;FS=19.675;HRun=0;HaplotypeScore=206.1703;InbreedingCoeff=0.6397;MQ=51.68;MQ0=37;MQRankSum=-5.032;QD=10.86;ReadPosRankSum=-2.694;VQSLOD=2.0063;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:39:64.85:0,65,883	0/0:16,0:16:45.15:0,45,622	0/0:34,0:4:12.04:0,12,158	0/0:41,0:11:27.09:0,27,366	0/0:19,0:19:48.10:0,48,667	0/0:20,0:20:32.63:0,33,460	0/0:47,0:44:99:0,108,1500	0/1:17,10:11:17.82:303,0,18	0/0:40,0:40:99:0,105,1416	0/0:63,0:62:99:0,181,2470	0/0:17,0:17:42.13:0,42,583	0/0:67,0:67:99:0,144,2001	0/0:52,0:52:99:0,120,1654	0/0:57,0:56:99:0,131,1805	0/0:46,0:46:99:0,123,1710	0/0:35,0:35:71.67:0,72,1004	1/1:6,2:15:26.93:302,27,0	0/0:37,0:37:95.76:0,96,1306	0/0:39,0:26:74.43:0,74,987	0/0:31,0:30:71.72:0,72,966	0/0:151,0:148:99:0,385,5269	0/0:43,0:43:88.22:0,88,1216	0/0:31,0:31:77.66:0,78,1086	0/0:69,0:69:99:0,155,2177	0/0:39,0:39:78.64:0,79,1023	0/0:43,0:42:99:0,120,1669	0/0:24,0:23:44.68:0,45,625	0/0:15,0:15:42.14:0,42,580
chr10	25700229	.	TAC	T	316.23	PASS	AB=0.900;AC=3;AF=0.054;AN=56;BaseQRankSum=0.199;DP=1122;FS=6.067;HRun=0;HaplotypeScore=281.8975;InbreedingCoeff=0.6857;MQ=52.13;MQ0=23;MQRankSum=-4.462;QD=7.53;ReadPosRankSum=-1.788;VQSLOD=2.3848;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,102,1643	0/0:12,0:12:36.12:0,36,596	0/0:41,0:11:24.06:0,24,369	0/0:38,0:11:30.10:0,30,488	0/0:22,0:22:50.80:0,51,816	0/0:24,0:24:32.68:0,33,558	0/0:45,0:44:87.09:0,87,1412	1/1:22,11:17:30.10:390,30,0	0/0:48,0:48:99:0,102,1643	0/0:63,0:63:99:0,169,2723	0/0:20,0:19:39.10:0,39,652	0/0:52,0:52:96.28:0,96,1621	0/0:65,0:65:99:0,129,2068	0/0:49,0:48:75.09:0,75,1184	0/0:37,0:37:96.28:0,96,1537	0/0:29,0:29:63.66:0,64,1014	0/1:5,1:8:10.13:33,0,10	0/0:32,0:32:55.01:0,55,1138	0/0:26,0:21:57.17:0,57,934	0/0:35,0:35:75.11:0,75,1193	0/0:145,0:146:99:0,331,5430	0/0:45,0:45:99:0,99,1560	0/0:29,0:29:60.63:0,61,983	0/0:64,0:65:99:0,128,2112	0/0:30,0:30:50.43:0,50,786	0/0:44,0:42:99:0,114,1929	0/0:21,0:20:48.16:0,48,788	0/0:13,0:13:30.07:0,30,480
chr10	25700261	.	T	TCA	28508.16	PASS	AB=0.538;AC=47;AF=0.839;AN=56;BaseQRankSum=-11.210;DP=1135;FS=10.478;HRun=0;HaplotypeScore=223.1754;InbreedingCoeff=0.8231;MQ=54.24;MQ0=16;MQRankSum=1.710;QD=30.56;ReadPosRankSum=1.736;VQSLOD=5.0030;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,105,1316	1/1:0,9:9:24.08:408,24,0	0/0:55,0:17:29.88:0,30,350	0/0:52,0:15:21.06:0,21,260	1/1:1,22:23:41.55:711,42,0	1/1:5,26:31:41.20:711,41,0	1/1:4,38:42:78.27:1327,78,0	1/1:20,19:33:31.77:945,32,0	1/1:7,42:51:78.58:1308,79,0	1/1:16,60:75:99:2974,184,0	1/1:3,17:20:29.70:510,30,0	1/1:4,48:52:71.61:1221,72,0	1/1:8,56:65:99:1834,111,0	1/1:19,33:51:67.72:1075,68,0	0/0:41,0:41:99:0,103,1326	1/1:5,24:29:51.13:867,51,0	1/1:0,1:1:3.01:51,3,0	1/1:1,21:22:45.15:765,45,0	1/1:10,12:21:48.16:805,48,0	1/1:2,24:26:53.40:916,53,0	1/1:37,96:134:99:5376,328,0	1/1:6,30:37:59.77:1020,60,0	1/1:3,26:28:57.12:968,57,0	1/1:6,58:67:99:1836,108,0	1/1:10,10:20:32.64:509,33,0	1/1:22,22:41:57.57:1417,58,0	0/1:4,24:28:46.65:699,0,47	1/1:2,6:8:15.05:255,15,0
chr10	25700308	.	TAC	T	2218.85	PASS	AB=0.938;AC=7;AF=0.125;AN=56;BaseQRankSum=1.428;DP=1150;FS=5.800;HRun=0;HaplotypeScore=226.6111;InbreedingCoeff=0.7836;MQ=52.83;MQ0=26;MQRankSum=1.376;QD=21.75;ReadPosRankSum=-1.354;VQSLOD=3.2098;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:24,31:53:99:1565,123,0	0/0:4,0:4:3.01:0,3,50	0/0:42,0:8:17.99:0,18,240	0/0:48,0:9:14.97:0,15,178	0/0:29,0:29:37.32:0,37,582	0/0:31,1:32:27.63:0,28,982	0/0:40,1:41:72.23:0,72,1166	1/1:11,6:12:32.75:366,33,0	0/0:47,0:47:93.14:0,93,1464	0/0:65,0:62:99:0,141,2489	0/1:14,1:14:20.93:21,0,234	0/0:71,0:70:99:0,144,2339	0/0:53,0:52:87.14:0,87,1323	0/0:59,1:60:90.70:0,91,1897	0/0:52,0:52:99:0,135,2217	0/0:42,2:44:69.74:0,70,1639	1/1:6,9:14:37.48:415,37,0	0/0:28,0:28:51.17:0,51,824	0/0:24,0:20:48.16:0,48,770	0/0:20,0:20:27.07:0,27,416	0/0:160,0:159:99:0,318,5089	0/0:21,0:21:39.09:0,39,559	0/0:23,0:22:34:0,34,551	0/0:74,2:76:72.77:0,73,1734	0/0:16,0:17:25.52:0,26,405	0/0:52,0:48:99:0,126,2002	0/0:29,0:28:47.93:0,48,654	0/0:8,0:8:21.07:0,21,353
chr10	25700410	.	T	TCACACA	19605.96	PASS	AB=0.542;AC=40;AF=0.714;AN=56;BaseQRankSum=-7.017;DP=1018;FS=26.909;HRun=0;HaplotypeScore=253.9127;InbreedingCoeff=0.6348;MQ=44.96;MQ0=11;MQRankSum=-5.862;QD=25.53;ReadPosRankSum=2.336;VQSLOD=3.1661;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:62:8.87:90,9,0	1/1:2,9:13:6.16:127,6,0	0/0:52,0:28:39.04:0,39,1403	0/0:51,0:16:21.13:0,21,806	0/0:8,22:31:0.89:0,1,3	1/1:1,23:24:2.39:105,2,0	1/1:21,15:35:27.06:595,27,0	1/1:30,10:37:99:2162,100,0	1/1:4,36:42:22.11:642,22,0	1/1:27,27:54:99:4001,147,0	0/1:4,17:25:0.86:18,0,1	1/1:14,21:34:42.06:1116,42,0	1/1:6,41:49:49.88:1466,50,0	1/1:10,41:51:4.17:180,4,0	0/0:48,0:48:99:0,126,2842	1/1:10,16:26:20.02:407,20,0	1/1:10,1:11:5.95:175,6,0	1/1:9,9:18:45.14:1256,45,0	1/1:2,17:21:54.14:1451,54,0	0/0:4,26:31:5.10:0,5,12	0/1:17,86:114:0.14:0,0,0	0/0:3,17:20:0.93:0,1,3	0/0:3,13:16:0.41:0,0,2	1/1:22,18:40:13.61:202,14,0	1/1:8,17:25:5.62:204,6,0	1/1:8,37:50:99:3875,138,0	1/1:4,18:23:45.76:1514,46,0	1/1:1,4:5:2.98:21,3,0
chr10	25700432	.	G	GCA	1244.36	PASS	AB=0.913;AC=5;AF=0.089;AN=56;BaseQRankSum=3.438;DP=915;FS=35.236;HRun=0;HaplotypeScore=250.3925;InbreedingCoeff=0.6079;MQ=46.51;MQ0=16;MQRankSum=-5.252;QD=16.37;ReadPosRankSum=-5.838;VQSLOD=1.5962;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:59,0:59:99:0,142,1748	0/0:15,0:15:15.48:0,15,187	0/0:54,0:27:31.30:0,31,362	0/0:43,0:21:39.76:0,40,418	0/0:21,0:21:7.12:0,7,111	0/0:23,0:23:17.92:0,18,209	0/0:29,0:27:32.72:0,33,415	1/1:23,25:46:87.15:1306,87,0	0/0:37,0:37:33.06:0,33,449	0/0:41,0:42:96.14:0,96,1182	0/1:19,2:21:38.54:39,0,88	0/0:33,0:33:54.70:0,55,701	0/0:40,0:40:41.69:0,42,578	0/0:37,0:36:17.57:0,18,325	0/0:35,0:35:87.22:0,87,1043	0/0:24,0:24:39:0,39,467	1/1:4,3:7:2.92:17,3,0	0/0:15,0:16:32.94:0,33,392	0/0:21,0:18:32.51:0,33,447	0/0:35,0:35:22.73:0,23,291	0/0:103,0:103:58.69:0,59,742	0/0:17,0:17:6.87:0,7,79	0/0:17,0:17:18.91:0,19,229	0/0:41,0:41:30.43:0,30,349	0/0:20,0:20:18.52:0,19,228	0/0:45,0:44:99:0,111,1364	0/0:25,0:24:42.10:0,42,509	0/0:5,0:5:11.50:0,11,99
chr10	25700456	.	T	TCA	1327.69	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=2.099;DP=903;FS=39.591;HRun=0;HaplotypeScore=238.1586;InbreedingCoeff=0.9714;MQ=50.14;MQ0=10;MQRankSum=-4.127;QD=21.77;ReadPosRankSum=-6.839;VQSLOD=1.1686;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:58:99:0,149,1804	0/0:16,0:16:33.56:0,34,424	0/0:50,0:18:32.70:0,33,366	0/0:40,0:25:64.28:0,64,713	0/0:15,0:15:22.16:0,22,293	0/0:22,0:22:30.01:0,30,382	0/0:32,0:30:56.95:0,57,715	1/1:29,15:43:81.12:1214,81,0	0/0:35,0:35:59.96:0,60,690	0/0:39,0:39:94.18:0,94,1172	0/0:18,0:18:13.83:0,14,191	0/0:35,0:35:86.72:0,87,1044	0/0:34,0:34:43.11:0,43,529	0/0:37,0:37:35.67:0,36,539	0/0:34,0:34:84.26:0,84,1059	0/0:24,0:24:51.13:0,51,686	1/1:3,14:16:17.46:233,17,0	0/0:19,0:19:50.42:0,50,569	0/0:27,0:24:51.65:0,52,715	0/0:37,0:37:40.85:0,41,571	0/0:113,0:113:99:0,107,1389	0/0:17,0:17:15.90:0,16,195	0/0:18,0:18:30.95:0,31,387	0/0:41,1:42:41.73:0,42,539	0/0:18,0:18:30.65:0,31,383	0/0:32,0:31:75.19:0,75,942	0/0:20,0:20:45.08:0,45,546	0/0:9,0:9:18.06:0,18,231
chr10	25700465	.	C	CAG	621.63	PASS	AB=0.909;AC=3;AF=0.054;AN=56;BaseQRankSum=7.864;DP=902;FS=44.974;HRun=0;HaplotypeScore=237.9968;InbreedingCoeff=0.4386;MQ=51.78;MQ0=8;MQRankSum=-5.624;QD=10.72;ReadPosRankSum=-4.488;VQSLOD=1.0915;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:59,0:59:99:0,155,2206	0/0:15,0:15:33.58:0,34,504	0/0:49,0:18:38.26:0,38,485	0/0:37,0:23:66.04:0,66,900	0/0:16,0:16:25.17:0,25,387	0/0:19,0:19:29.97:0,30,451	0/0:24,3:27:60.14:0,60,885	1/1:37,0:37:2:539,2,0	0/0:37,0:37:72.58:0,73,944	0/0:39,0:39:97.32:0,97,1540	0/0:18,0:18:22.83:0,23,301	0/0:36,0:36:92.91:0,93,1266	0/0:30,0:30:46.34:0,46,612	0/0:39,0:39:50.68:0,51,756	0/0:33,0:33:93.26:0,93,1331	0/0:25,0:25:54.09:0,54,838	0/1:18,2:19:48.93:173,0,49	0/0:22,0:22:51.17:0,51,751	0/0:31,0:29:83.91:0,84,1084	0/0:39,0:39:59.44:0,59,795	0/0:113,0:113:99:0,130,1871	0/0:18,0:18:21.90:0,22,282	0/0:19,0:19:39.94:0,40,534	0/0:42,2:44:55.35:0,55,736	0/0:20,0:20:33.65:0,34,484	0/0:27,0:27:75.20:0,75,1110	0/0:19,0:19:45.08:0,45,627	0/0:9,0:9:21.06:0,21,299
chr10	25700681	.	G	GA	3487.86	PASS	AB=0.752;AC=43;AF=0.768;AN=56;BaseQRankSum=-3.000;DP=498;FS=0.000;HRun=14;HaplotypeScore=66.8929;InbreedingCoeff=0.1463;MQ=56.33;MQ0=21;MQRankSum=0.463;QD=7.79;ReadPosRankSum=-1.891;VQSLOD=2.1333;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:29:24.52:0,25,100	1/1:2,1:3:5.68:37,6,0	0/1:19,0:8:2.11:2,0,44	0/1:9,0:8:10.90:11,0,19	1/1:8,19:28:33.55:251,34,0	0/1:4,10:14:4.27:87,0,4	1/1:12,10:22:13.38:226,13,0	0/1:42,0:45:2.12:96,0,2	1/1:4,14:18:29.99:264,30,0	0/1:6,8:14:11.91:129,0,12	1/1:7,10:18:30.16:260,30,0	0/1:4,9:12:1.27:114,0,1	0/1:6,8:13:7.27:67,0,7	1/1:3,11:14:12:106,12,0	0/0:18,2:19:12.41:0,12,187	1/1:4,8:11:14.67:105,15,0	1/1:23,0:23:17.84:103,18,0	1/1:6,11:17:7.57:180,8,0	1/1:10,8:18:5.65:164,6,0	1/1:10,14:24:7.46:164,7,0	1/1:3,7:11:1.57:127,2,0	1/1:4,2:6:5.99:50,6,0	0/1:6,7:13:17.50:107,0,17	1/1:6,12:16:11.94:97,12,0	1/1:11,6:16:35.63:287,36,0	1/1:12,7:19:22.17:278,22,0	0/1:6,3:9:10.21:44,0,10	1/1:9,7:13:15:132,15,0
chr10	25701757	.	CTT	C	2217.88	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.078;DP=602;FS=10.091;HRun=2;HaplotypeScore=71.8449;InbreedingCoeff=0.9840;MQ=89.87;MQ0=0;MQRankSum=-1.581;QD=42.65;ReadPosRankSum=-2.136;VQSLOD=2.1050;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:87.29:0,87,1733	0/0:5,0:5:12.03:0,12,210	0/0:20,0:20:60.01:0,60,1068	0/0:32,0:32:83.81:0,84,1570	0/0:19,0:19:57.11:0,57,1075	0/0:17,0:17:51.18:0,51,1034	0/0:21,0:21:63.22:0,63,1268	1/1:0,28:28:81.25:1264,81,0	0/0:30,0:30:87.28:0,87,1731	0/0:15,0:15:45.15:0,45,914	0/0:17,0:17:51.18:0,51,1020	0/0:21,0:21:60.21:0,60,1217	0/0:23,0:23:66.21:0,66,1272	0/0:23,0:23:69.24:0,69,1392	0/0:26,0:26:78.25:0,78,1514	0/0:25,0:25:75.24:0,75,1488	1/1:0,24:24:66.23:1076,66,0	0/0:16,0:16:48.11:0,48,888	0/0:24,0:24:72.23:0,72,1394	0/0:17,0:17:51.16:0,51,999	0/0:17,0:17:51.16:0,51,1000	0/0:10,0:10:30.09:0,30,550	0/0:24,0:24:72.22:0,72,1388	0/0:31,0:31:93.31:0,93,1853	0/0:20,0:20:60.21:0,60,1219	0/0:17,0:17:51.16:0,51,1000	0/0:39,0:39:99:0,114,2278	0/0:12,0:12:36.12:0,36,717
chr10	25702702	.	T	TA	654.38	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-6.352;DP=498;FS=5.478;HRun=8;HaplotypeScore=48.4719;InbreedingCoeff=0.9362;MQ=63.38;MQ0=0;MQRankSum=1.804;QD=22.56;ReadPosRankSum=-1.687;VQSLOD=3.3484;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:36:0,36,324	0/0:6,0:6:18.01:0,18,165	0/0:6,0:6:9:0,9,79	0/0:5,0:5:8.89:0,9,81	0/0:35,0:35:87.04:0,87,796	0/0:17,0:17:48.02:0,48,439	0/0:12,0:12:30.01:0,30,274	1/1:3,9:12:27.05:291,27,0	0/0:19,0:19:54.03:0,54,494	0/0:28,0:28:72.02:0,72,659	0/0:11,0:11:33.02:0,33,302	0/0:16,0:16:42.01:0,42,384	0/0:28,0:28:69.03:0,69,630	0/0:23,0:23:57.02:0,57,522	0/0:21,0:21:48.02:0,48,439	0/0:24,0:24:66.03:0,66,604	1/1:0,17:17:42.12:485,42,0	0/0:15,0:15:39.02:0,39,357	0/0:14,0:14:27.47:0,27,248	0/0:19,0:19:54.03:0,54,494	0/0:9,0:9:27:0,27,243	0/0:18,0:18:48.02:0,48,439	0/0:15,0:15:44.99:0,45,402	0/0:17,0:17:45.02:0,45,412	0/0:20,0:20:45.02:0,45,412	0/0:30,0:30:81.03:0,81,737	0/0:36,0:36:96:0,96,867	0/0:12,0:12:33.02:0,33,302
chr10	25703114	.	GA	G	1169.27	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.819;DP=652;FS=19.466;HRun=2;HaplotypeScore=72.9368;InbreedingCoeff=0.9243;MQ=52.50;MQ0=6;MQRankSum=-1.941;QD=28.52;ReadPosRankSum=-0.625;VQSLOD=1.9101;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:68.96:0,69,949	0/0:7,0:7:21.07:0,21,303	0/0:12,0:3:3.90:0,4,47	0/0:19,0:9:27.09:0,27,379	0/0:24,0:24:69.20:0,69,1009	0/0:20,0:20:57.02:0,57,798	0/0:22,0:22:66.22:0,66,989	1/1:2,22:21:57.13:707,57,0	0/0:27,0:27:81:0,81,1092	0/0:23,0:23:69.21:0,69,980	0/0:20,0:20:60.13:0,60,867	0/0:15,0:15:45.11:0,45,649	0/0:29,0:29:78.21:0,78,1142	0/0:27,0:27:78.07:0,78,1069	0/0:23,0:23:66.02:0,66,906	0/0:26,0:26:78.14:0,78,1115	1/1:1,16:17:45.15:583,45,0	0/0:42,0:42:99:0,117,1753	0/0:26,0:21:63.21:0,63,943	0/0:30,0:30:90.10:0,90,1270	0/0:30,0:30:84.28:0,84,1256	0/0:23,0:23:63.08:0,63,889	0/0:20,0:20:57.08:0,57,784	0/0:18,0:18:51.16:0,51,744	0/0:19,0:19:54.10:0,54,773	0/0:35,0:35:99:0,105,1525	0/0:38,0:37:99:0,105,1407	0/0:10,0:10:30.10:0,30,448
chr10	25703518	.	A	AC	1780.82	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-2.276;DP=627;FS=0.000;HRun=4;HaplotypeScore=56.5357;InbreedingCoeff=0.9978;MQ=69.84;MQ0=0;MQRankSum=-4.314;QD=32.98;ReadPosRankSum=-2.794;VQSLOD=2.8678;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:72.16:0,72,802	0/0:9,0:9:27.08:0,27,306	0/0:19,0:19:51.10:0,51,549	0/0:10,0:10:30.07:0,30,330	0/0:31,0:31:87.25:0,87,986	0/0:33,0:33:84.22:0,84,946	0/0:10,0:10:24.07:0,24,272	1/1:3,31:34:93.28:1225,93,0	0/0:26,0:25:69.19:0,69,782	0/0:34,0:34:87.24:0,87,981	0/0:17,0:17:48.13:0,48,537	0/0:16,0:16:45.13:0,45,510	0/0:24,0:24:69.14:0,69,747	0/0:22,0:22:60.17:0,60,680	0/0:29,0:28:84.24:0,84,953	0/0:27,0:27:69.20:0,69,782	1/1:1,19:20:34.02:677,34,0	0/0:20,0:20:31.46:0,31,544	0/0:20,0:20:60.04:0,60,630	0/0:34,0:34:99:0,102,1136	0/0:19,0:19:57.12:0,57,615	0/0:20,0:20:48.13:0,48,544	0/0:25,0:25:46.21:0,46,686	0/0:20,0:19:57.15:0,57,638	0/0:21,0:21:54.15:0,54,609	0/0:25,0:25:69.19:0,69,775	0/0:24,0:24:69.18:0,69,771	0/0:14,0:14:35.99:0,36,360
chr10	25704532	.	TA	T	9140.10	PASS	AB=0.722;AC=53;AF=0.946;AN=56;BaseQRankSum=-1.766;DP=500;FS=7.920;HRun=2;HaplotypeScore=97.8199;InbreedingCoeff=0.4233;MQ=41.35;MQ0=1;MQRankSum=-1.753;QD=18.88;ReadPosRankSum=2.562;VQSLOD=4.5597;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,17:13:5.43:77,5,0	1/1:1,5:4:12.04:155,12,0	0/1:8,5:7:35.71:36,0,39	0/0:9,7:4:6.02:0,6,79	1/1:1,31:30:59.74:638,60,0	1/1:2,18:14:33.11:422,33,0	1/1:4,12:14:30.08:365,30,0	1/1:1,13:11:30.10:389,30,0	1/1:3,18:13:27.07:334,27,0	1/1:0,22:19:57.18:733,57,0	1/1:1,21:20:29.96:355,30,0	1/1:2,14:9:14.97:159,15,0	1/1:1,19:12:18.05:220,18,0	1/1:1,21:15:33.11:426,33,0	1/1:1,19:14:21.07:272,21,0	1/1:2,19:12:24.06:296,24,0	1/1:1,9:7:12.04:156,12,0	1/1:1,5:5:6.02:78,6,0	1/1:1,16:12:24.08:311,24,0	1/1:1,19:16:41.97:472,42,0	1/1:2,4:4:12.03:139,12,0	1/1:3,25:24:53.97:661,54,0	1/1:0,25:21:30.03:362,30,0	1/1:3,11:11:18.02:214,18,0	1/1:1,17:16:41.96:475,42,0	1/1:1,19:18:48.16:618,48,0	1/1:5,18:17:33.09:412,33,0	1/1:3,10:11:32.95:368,33,0
chr10	25704846	.	T	TG	1595.45	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-3.613;DP=697;FS=0.580;HRun=3;HaplotypeScore=66.2506;InbreedingCoeff=0.9976;MQ=57.63;MQ0=4;MQRankSum=-5.856;QD=29.55;ReadPosRankSum=-1.936;VQSLOD=2.4789;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:90.26:0,90,1066	0/0:14,0:13:39.12:0,39,467	0/0:24,0:18:48.14:0,48,575	0/0:26,0:19:44.40:0,44,587	0/0:41,0:41:96.29:0,96,1147	0/0:28,0:28:81.25:0,81,972	0/0:15,0:15:42.10:0,42,479	1/1:3,20:20:51.12:668,51,0	0/0:26,0:26:78.23:0,78,924	0/0:29,0:24:66.10:0,66,772	0/0:23,0:22:54.17:0,54,647	0/0:10,0:10:30.09:0,30,360	0/0:30,0:29:84.26:0,84,1008	0/0:23,0:23:66.20:0,66,792	0/0:33,0:33:99:0,99,1187	0/0:20,0:20:60.18:0,60,720	1/1:1,30:31:75.25:1049,75,0	0/0:24,0:24:63.06:0,63,724	0/0:25,0:23:63.17:0,63,742	0/0:29,0:28:75.23:0,75,896	0/0:17,0:17:51.16:0,51,612	0/0:29,0:29:81.25:0,81,971	0/0:31,0:29:57.17:0,57,681	0/0:24,0:24:69.21:0,69,828	0/0:21,0:19:54.16:0,54,637	0/0:18,0:18:51.15:0,51,603	0/0:43,0:43:99:0,123,1475	0/0:7,0:7:21.06:0,21,249
chr10	25705181	.	GT	G	387.53	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.107;DP=592;FS=10.009;HRun=9;HaplotypeScore=62.0241;InbreedingCoeff=0.9817;MQ=74.78;MQ0=0;MQRankSum=0.058;QD=17.62;ReadPosRankSum=0.364;VQSLOD=3.2202;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,20:22:53.93:482,54,0	0/0:13,0:13:33.10:0,33,381	0/0:15,0:13:27.04:0,27,283	0/0:20,0:19:27.23:0,27,319	0/0:37,0:37:99:0,105,1200	0/0:32,0:32:78.23:0,78,900	0/0:19,0:19:57.13:0,57,634	0/0:28,0:28:75.22:0,75,866	0/0:16,0:16:45.13:0,45,519	0/0:23,0:23:60.18:0,60,692	0/0:24,0:24:69.20:0,69,796	0/0:17,0:17:51.15:0,51,589	0/0:28,0:28:78.22:0,78,891	0/0:5,0:5:15.03:0,15,164	0/0:21,0:21:60.18:0,60,692	0/0:23,0:23:66.20:0,66,761	0/0:11,0:11:33.10:0,33,379	0/0:21,0:21:60.18:0,60,691	0/0:16,0:16:39.11:0,39,441	0/0:27,0:28:72.20:0,72,822	0/0:18,0:18:39.12:0,39,450	0/0:12,0:12:36.11:0,36,415	0/0:29,0:29:81.20:0,81,906	0/0:18,0:18:47.17:0,47,526	0/0:26,0:26:69.18:0,69,784	0/0:25,0:25:63.19:0,63,727	0/0:29,0:29:81.11:0,81,913	0/0:16,0:16:48.14:0,48,554
chr10	25705621	.	TA	T	726.85	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.033;DP=616;FS=0.000;HRun=9;HaplotypeScore=68.6828;InbreedingCoeff=0.9919;MQ=75.82;MQ0=2;MQRankSum=-2.698;QD=17.31;ReadPosRankSum=-1.112;VQSLOD=3.3866;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:81.20:0,81,913	0/0:12,0:12:36.11:0,36,415	0/0:23,0:19:34.33:0,34,430	0/0:15,0:14:16.12:0,16,165	0/0:36,0:36:93.28:0,93,1073	0/0:17,0:17:45.12:0,45,511	0/0:16,0:16:36.11:0,36,415	1/1:10,17:27:56.49:496,56,0	0/0:12,0:12:33.06:0,33,351	0/0:27,0:27:72.21:0,72,823	0/0:21,0:21:54.11:0,54,584	0/0:18,0:18:45.11:0,45,498	0/0:28,0:28:69.19:0,69,785	0/0:18,0:18:51.14:0,51,580	0/0:33,0:33:93.23:0,93,1035	0/0:20,0:20:51.15:0,51,588	1/1:3,12:15:39:352,39,0	0/0:25,0:25:60.13:0,60,674	0/0:15,0:15:42.12:0,42,484	0/0:28,0:28:75.20:0,75,846	0/0:12,0:12:30.09:0,30,346	0/0:11,0:11:24.07:0,24,277	0/0:25,0:25:72.18:0,72,801	0/0:18,0:18:51.14:0,51,577	0/0:35,0:35:99:0,99,1134	0/0:29,0:29:78.22:0,78,892	0/0:30,0:30:78.14:0,78,862	0/0:20,0:20:51.15:0,51,589
chr10	25707174	.	C	CTG	1359.14	PASS	AB=0.821;AC=31;AF=0.596;AN=52;BaseQRankSum=-2.423;DP=612;FS=4.566;HRun=0;HaplotypeScore=109.4680;InbreedingCoeff=-0.1289;MQ=65.84;MQ0=14;MQRankSum=-1.277;QD=2.93;ReadPosRankSum=-0.063;VQSLOD=2.0260;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:28:11.98:99,12,0	0/1:10,4:16:55.21:55,0,71	./.	./.	0/1:15,3:18:26.04:38,0,26	1/1:32,0:32:6.51:176,7,0	0/1:21,6:26:17.02:161,0,17	1/1:36,0:35:6.79:41,7,0	0/1:11,3:16:26.06:38,0,26	1/1:24,0:23:8.09:51,8,0	1/1:16,2:19:3.01:44,3,0	1/1:11,0:11:0.52:11,1,0	1/1:6,4:10:6.02:88,6,0	1/1:21,4:25:3.01:44,3,0	1/1:22,0:22:6:52,6,0	0/0:19,0:25:11.03:0,11,56	0/1:21,3:24:14.28:144,0,14	0/0:9,0:16:13.06:0,13,68	0/0:14,0:14:2.97:0,3,32	0/0:15,0:15:2.99:0,3,24	0/1:27,0:26:10.74:38,0,11	0/1:9,5:15:32.11:32,0,64	0/1:16,7:22:26.07:38,0,26	0/1:29,1:28:11.63:71,0,12	0/0:13,4:17:3:0,3,12	1/1:20,0:19:2.17:105,2,0	0/1:22,3:26:44.18:68,0,44	0/1:6,5:9:28.99:117,0,29
chr10	25708563	.	AATATTTTTATACT	A	22717.48	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=14.054;DP=456;FS=8.411;HRun=0;HaplotypeScore=170.3076;InbreedingCoeff=0.9477;MQ=70.60;MQ0=0;MQRankSum=-13.521;QD=69.47;ReadPosRankSum=5.643;VQSLOD=3.8830;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:51.15:0,51,2838	1/1:0,7:7:15.05:627,15,0	0/0:14,0:14:35.26:0,35,1576	0/0:16,0:16:45.11:0,45,1843	1/1:0,12:12:14.98:395,15,0	1/1:0,16:16:24.08:953,24,0	1/1:0,16:16:45.15:1749,45,0	0/0:35,0:35:99:0,102,5808	1/1:1,21:22:42.14:1664,42,0	1/1:0,18:18:39.02:1217,39,0	1/1:1,10:11:18.02:570,18,0	1/1:0,27:27:54.19:2214,54,0	1/1:1,25:26:53.87:2161,54,0	1/1:0,23:23:48.10:1753,48,0	0/0:32,0:32:96.28:0,96,5586	1/1:0,13:13:33.11:1378,33,0	0/0:15,0:15:45.15:0,45,2934	1/1:0,6:6:6.02:251,6,0	1/1:0,16:16:47.98:1331,48,0	1/1:0,9:9:17.92:416,18,0	1/1:0,9:9:14.76:377,15,0	1/1:0,11:11:21.03:634,21,0	1/1:0,9:9:12:346,12,0	1/1:0,12:12:11.55:501,12,0	1/1:0,13:13:18.06:700,18,0	1/1:0,15:15:39.03:1153,39,0	1/1:0,26:26:44.95:1702,45,0	1/1:0,10:10:15.05:627,15,0
chr10	25708885	.	TA	T	10987.73	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=16.370;DP=602;FS=5.700;HRun=1;HaplotypeScore=156.9899;InbreedingCoeff=0.9862;MQ=81.02;MQ0=0;MQRankSum=-7.975;QD=23.63;ReadPosRankSum=5.470;VQSLOD=4.7814;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:63.21:0,63,1007	1/1:0,3:3:8.98:75,9,0	0/0:21,0:21:63.17:0,63,941	0/0:18,0:18:51.61:0,52,778	1/1:1,25:26:62.47:461,62,0	1/1:1,32:33:95.66:776,96,0	1/1:3,20:23:68.80:585,69,0	0/0:26,0:26:75.23:0,75,1137	1/1:1,19:20:55.98:478,56,0	1/1:1,24:25:71.75:640,72,0	1/1:0,20:20:53.10:439,53,0	1/1:0,26:26:77.62:619,78,0	1/1:1,26:26:77.62:626,78,0	1/1:3,20:23:64.19:527,64,0	0/0:21,0:21:63.21:0,63,1007	1/1:3,37:40:99:965,116,0	0/0:30,0:30:90.27:0,90,1390	1/1:0,9:9:26.93:222,27,0	1/1:1,18:19:56.98:513,57,0	1/1:1,28:29:84.03:657,84,0	1/1:4,14:18:48.87:435,49,0	1/1:0,14:14:38.36:281,38,0	1/1:1,21:22:65.61:514,66,0	1/1:0,11:11:29.90:248,30,0	1/1:0,14:14:41.91:364,42,0	1/1:2,28:30:86.90:778,87,0	1/1:0,27:27:80.49:633,80,0	1/1:0,6:6:17.93:152,18,0
chr10	25708887	.	GA	G	11055.44	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=16.198;DP=595;FS=2.662;HRun=1;HaplotypeScore=157.9087;InbreedingCoeff=0.9862;MQ=79.96;MQ0=0;MQRankSum=-7.097;QD=23.98;ReadPosRankSum=4.716;VQSLOD=5.0047;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:66.22:0,66,1048	1/1:0,3:3:8.98:75,9,0	0/0:20,0:20:60.20:0,60,960	0/0:17,0:17:48.63:0,49,752	1/1:0,25:25:59.48:439,59,0	1/1:3,32:35:99:823,102,0	1/1:2,20:23:68.82:590,69,0	0/0:24,0:24:69.21:0,69,1022	1/1:0,19:19:56.88:481,57,0	1/1:0,24:24:71.78:642,72,0	1/1:0,20:20:53.37:441,53,0	1/1:0,26:26:77.64:622,78,0	1/1:1,26:26:77.64:628,78,0	1/1:2,20:22:65.69:523,66,0	0/0:22,0:22:66.21:0,66,1030	1/1:1,37:38:99:943,114,0	0/0:29,0:29:87.28:0,87,1366	1/1:0,9:9:26.93:223,27,0	1/1:1,18:19:56.97:509,57,0	1/1:0,28:28:83.56:658,84,0	1/1:3,14:18:47.98:433,48,0	1/1:0,14:14:38.36:282,38,0	1/1:2,21:23:68.61:541,69,0	1/1:0,11:11:29.90:249,30,0	1/1:0,14:14:41.91:364,42,0	1/1:2,28:30:89.90:804,90,0	1/1:0,27:27:80.53:635,81,0	1/1:0,6:6:17.93:152,18,0
chr10	25708941	.	GTTC	G	18185.63	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=14.645;DP=630;FS=12.546;HRun=0;HaplotypeScore=139.6433;InbreedingCoeff=0.9897;MQ=82.43;MQ0=0;MQRankSum=-10.602;QD=39.71;ReadPosRankSum=5.951;VQSLOD=5.3385;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:90.27:0,90,1914	1/1:0,6:6:15.05:241,15,0	0/0:25,0:25:57.05:0,57,1176	0/0:19,0:19:31.44:0,31,924	1/1:4,27:31:51.17:812,51,0	1/1:4,23:27:69.23:1102,69,0	1/1:1,23:24:66.23:1059,66,0	0/0:36,0:36:90.29:0,90,1897	1/1:2,17:19:45.15:723,45,0	1/1:4,20:24:60.20:964,60,0	1/1:4,7:11:15.05:241,15,0	1/1:3,18:21:54.18:867,54,0	1/1:3,25:27:69.21:1081,69,0	1/1:6,33:39:99:1580,99,0	0/0:36,0:36:99:0,105,2273	1/1:4,30:34:87.30:1397,87,0	0/0:26,0:26:72.23:0,72,1532	1/1:0,9:9:24.08:386,24,0	1/1:4,16:20:48.16:771,48,0	1/1:1,18:19:54.18:864,54,0	1/1:0,23:23:54.18:868,54,0	1/1:0,19:19:51.17:817,51,0	1/1:1,16:17:48.16:766,48,0	1/1:1,14:15:33.11:530,33,0	1/1:3,10:13:27.09:434,27,0	1/1:3,22:25:72.23:1104,72,0	1/1:0,29:29:84.29:1349,84,0	1/1:3,2:5:15.05:230,15,0
chr10	25709311	.	T	TACACACACACACAC	20929.48	PASS	AB=1.000;AC=42;AF=0.750;AN=56;BaseQRankSum=-0.491;DP=608;FS=1.787;HRun=0;HaplotypeScore=218.4113;InbreedingCoeff=0.6363;MQ=46.02;MQ0=6;MQRankSum=-7.687;QD=46.61;ReadPosRankSum=-2.302;VQSLOD=4.3328;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:43,0:43:94.40:94,0,2194	1/1:4,3:8:9.03:539,9,0	0/0:40,0:18:14.66:0,15,392	0/0:42,0:23:27.09:0,27,707	1/1:22,2:23:3.01:202,3,0	1/1:24,5:26:27.09:1647,27,0	1/1:19,2:25:21.46:1313,21,0	0/0:28,0:26:20.98:0,21,755	1/1:11,6:17:24.08:1478,24,0	1/1:29,0:24:36.12:1602,36,0	1/1:14,0:12:2.97:202,3,0	1/1:20,2:22:14.37:1259,14,0	1/1:16,5:21:27.09:1588,27,0	1/1:16,1:16:18.06:947,18,0	0/0:23,0:23:48.13:0,48,1629	1/1:15,3:19:18.06:996,18,0	0/0:15,0:16:42.13:0,42,1546	1/1:7,0:6:5.97:234,6,0	1/1:7,0:6:15.05:621,15,0	1/1:26,0:26:12.04:687,12,0	0/1:8,0:8:27.09:196,0,27	1/1:15,3:18:12.04:676,12,0	1/1:13,5:18:18.02:1092,18,0	1/1:17,1:17:3.01:183,3,0	1/1:19,4:23:15.05:950,15,0	1/1:28,2:31:57.18:2440,57,0	1/1:18,3:19:33.11:1984,33,0	0/0:10,0:10:1.55:0,2,4
chr10	25709384	.	T	TATACATACATAC	14334.48	PASS	AB=0.585;AC=47;AF=0.839;AN=56;BaseQRankSum=-7.849;DP=700;FS=4.005;HRun=0;HaplotypeScore=220.4893;InbreedingCoeff=0.5434;MQ=46.73;MQ0=2;MQRankSum=-6.017;QD=24.67;ReadPosRankSum=-1.623;VQSLOD=3.4176;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:11,0:38:43.82:144,0,44	1/1:3,4:7:6.02:350,6,0	0/0:34,0:27:3.36:0,3,46	0/0:28,0:18:14.97:0,15,201	1/1:6,19:27:3.01:121,3,0	1/1:9,19:32:15.05:797,15,0	1/1:25,0:25:15.03:209,15,0	1/1:35,0:40:25.96:197,26,0	1/1:5,11:23:15.05:849,15,0	1/1:10,22:32:39.12:1414,39,0	1/1:3,14:17:6.02:350,6,0	1/1:9,20:35:30.10:1604,30,0	1/1:4,20:24:21.07:1159,21,0	1/1:4,16:21:6.02:281,6,0	0/0:34,0:34:72.22:0,72,2005	1/1:6,16:22:9.03:525,9,0	0/0:9,0:23:5.70:0,6,29	1/1:9,5:15:12.04:596,12,0	1/1:13,6:19:27.04:546,27,0	1/1:5,20:31:12.04:634,12,0	1/1:13,0:13:3.01:49,3,0	1/1:7,13:22:12.04:595,12,0	1/1:17,1:18:12:146,12,0	1/1:18,0:17:15.01:192,15,0	1/1:5,11:19:3.01:161,3,0	1/1:13,21:35:54.14:2363,54,0	1/1:4,22:30:15.11:876,15,0	1/1:3,3:9:3.01:175,3,0
chr10	25709655	.	C	CA	1736.41	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-11.005;DP=736;FS=3.870;HRun=8;HaplotypeScore=148.9627;InbreedingCoeff=0.9883;MQ=65.66;MQ0=0;MQRankSum=1.301;QD=27.13;ReadPosRankSum=-2.600;VQSLOD=1.3792;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,138,1251	0/0:7,0:8:16.98:0,17,134	0/0:19,0:20:22.75:0,23,181	0/0:17,0:18:18.53:0,19,132	0/0:28,0:28:78.02:0,78,706	0/0:20,0:20:53.99:0,54,484	0/0:24,0:24:60.03:0,60,549	1/1:2,32:34:93.26:1062,93,0	0/0:26,0:26:69.01:0,69,622	0/0:37,0:36:99:0,99,898	0/0:18,0:16:36.01:0,36,328	0/0:20,0:20:53.97:0,54,482	0/0:16,0:16:44.97:0,45,397	0/0:23,0:23:63.02:0,63,572	0/0:45,0:45:99:0,123,1109	0/0:33,0:33:87.04:0,87,792	1/1:6,24:30:69.20:796,69,0	0/0:37,0:37:92.97:0,93,835	0/0:27,0:27:60.03:0,60,549	0/0:28,0:27:69.91:0,70,629	0/0:21,0:21:59.96:0,60,527	0/0:26,1:27:36.73:0,37,565	0/0:15,0:15:33:0,33,302	0/0:38,2:40:44.81:0,45,913	0/0:21,0:21:57.03:0,57,521	0/0:29,0:29:77.99:0,78,702	0/0:32,0:32:90.04:0,90,819	0/0:8,0:8:24.01:0,24,219
chr10	25710339	.	TA	T	16866.78	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=15.071;DP=638;FS=1.177;HRun=3;HaplotypeScore=104.2492;InbreedingCoeff=0.9983;MQ=87.92;MQ0=0;MQRankSum=-5.485;QD=33.67;ReadPosRankSum=4.549;VQSLOD=4.7376;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:72.24:0,72,1034	1/1:1,7:8:18.06:223,18,0	0/0:20,0:20:57.16:0,57,784	0/0:26,0:26:62.14:0,62,768	1/1:1,20:21:48.15:594,48,0	1/1:1,20:21:54.17:669,54,0	1/1:0,34:34:96.30:1190,96,0	0/0:21,0:21:57.19:0,57,821	1/1:0,19:19:54.17:669,54,0	1/1:0,20:20:60.19:743,60,0	1/1:0,16:16:39.12:483,39,0	1/1:0,23:23:54.17:669,54,0	1/1:0,24:24:69.22:855,69,0	1/1:1,19:20:57.18:705,57,0	0/0:26,0:26:75.24:0,75,1060	1/1:0,19:19:51.16:632,51,0	0/0:18,0:18:51.16:0,51,716	1/1:0,18:18:48.15:595,48,0	1/1:1,22:23:66.21:815,66,0	1/1:1,15:16:42.13:517,42,0	1/1:2,46:48:99:1562,126,0	1/1:0,27:27:78.25:967,78,0	1/1:0,30:30:84.26:1041,84,0	1/1:0,24:24:66.21:817,66,0	1/1:0,21:21:54.17:669,54,0	1/1:0,32:32:96.30:1189,96,0	1/1:0,24:24:63.20:778,63,0	1/1:0,13:13:39.12:484,39,0
chr10	25710500	.	TTATG	T	24788.10	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=12.729;DP=607;FS=1.718;HRun=0;HaplotypeScore=151.4764;InbreedingCoeff=0.9919;MQ=57.93;MQ0=3;MQRankSum=-6.532;QD=51.53;ReadPosRankSum=5.737;VQSLOD=5.9219;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:51.16:0,51,1301	1/1:0,7:7:21.07:419,21,0	0/0:18,0:15:45.15:0,45,1184	0/0:13,0:10:28.99:0,29,485	1/1:0,32:32:90.15:1617,90,0	1/1:0,24:24:57.20:1138,57,0	1/1:1,19:20:45.15:898,45,0	0/0:30,0:30:90.29:0,90,2314	1/1:0,23:23:60.21:1197,60,0	1/1:1,36:37:99:1966,102,0	1/1:1,17:18:45.11:858,45,0	1/1:1,23:24:60.21:1197,60,0	1/1:1,23:24:66.23:1300,66,0	1/1:1,15:16:39.13:759,39,0	0/0:25,0:25:75.26:0,75,2061	1/1:0,20:20:57.20:1138,57,0	0/0:21,0:21:54.18:0,54,1420	1/1:1,16:17:45.15:898,45,0	1/1:3,16:18:48.16:951,48,0	1/1:1,26:27:75.87:1474,76,0	1/1:2,10:12:21.07:419,21,0	1/1:0,27:26:72.25:1436,72,0	1/1:0,26:26:69.19:1337,69,0	1/1:0,13:13:30.57:599,31,0	1/1:1,31:32:81.28:1596,81,0	1/1:0,36:36:99:2093,105,0	1/1:0,23:23:63.22:1258,63,0	1/1:0,4:4:12.04:239,12,0
chr10	25710533	.	G	GA	978.05	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-8.958;DP=647;FS=7.472;HRun=9;HaplotypeScore=172.2355;InbreedingCoeff=0.9805;MQ=68.23;MQ0=0;MQRankSum=1.108;QD=21.26;ReadPosRankSum=-2.566;VQSLOD=1.5585;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:53.98:0,54,469	0/0:5,0:5:11.99:0,12,104	0/0:20,0:20:38.58:0,39,327	0/0:14,0:14:27.44:0,27,224	0/0:24,0:24:68.99:0,69,598	0/0:25,1:26:26.81:0,27,462	0/0:19,0:19:29.96:0,30,260	1/1:5,19:25:56.97:602,57,0	0/0:22,0:22:47.97:0,48,415	0/0:34,0:34:80.97:0,81,703	0/0:18,0:19:53.01:0,53,445	0/0:28,0:28:65.97:0,66,573	0/0:26,0:27:53.95:0,54,469	0/0:20,0:21:46.99:0,47,394	0/0:27,1:28:50.80:0,51,670	0/0:31,1:32:53.82:0,54,692	1/1:4,17:21:45.12:498,45,0	0/0:19,0:19:47.98:0,48,416	0/0:20,0:20:53.96:0,54,464	0/0:30,0:30:83.98:0,84,729	0/0:13,0:13:29.98:0,30,260	0/0:22,0:22:50.97:0,51,443	0/0:22,0:22:59.98:0,60,521	0/0:19,0:19:47.99:0,48,417	0/0:33,1:34:47.82:0,48,644	0/0:44,0:44:99:0,123,1063	0/0:31,0:31:86.96:0,87,752	0/0:7,0:7:21:0,21,182
chr10	25711103	.	A	AT	1601.14	PASS	AB=0.964;AC=8;AF=0.143;AN=56;BaseQRankSum=-8.081;DP=572;FS=2.912;HRun=11;HaplotypeScore=71.1770;InbreedingCoeff=0.7537;MQ=71.23;MQ0=0;MQRankSum=1.429;QD=14.83;ReadPosRankSum=-3.974;VQSLOD=3.0869;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:4,19:24:30.70:478,31,0	0/0:12,0:12:29.85:0,30,228	0/0:12,0:11:8.07:0,8,81	0/1:14,0:14:4.25:4,0,72	0/0:28,0:28:65.68:0,66,507	0/0:21,0:20:47.77:0,48,371	0/0:14,0:16:40.87:0,41,304	1/1:8,25:33:34.60:683,35,0	0/0:12,0:14:36.92:0,37,262	0/0:34,0:35:73.56:0,74,555	0/0:19,0:19:47.73:0,48,361	0/0:25,0:25:68.72:0,69,532	0/0:11,0:13:36.90:0,37,260	0/0:20,0:21:43.82:0,44,326	0/0:17,0:17:41.82:0,42,323	0/0:19,0:19:47.02:0,47,355	1/1:3,21:24:57.11:579,57,0	0/0:21,0:22:45.35:0,45,425	0/0:19,0:19:40.86:0,41,306	0/0:20,0:20:50.78:0,51,395	0/0:13,2:15:5.43:0,5,225	0/0:20,0:21:55.82:0,56,424	0/0:23,0:23:59.73:0,60,462	0/0:17,0:17:50.77:0,51,389	0/0:22,0:23:58.81:0,59,447	0/0:27,0:27:74.70:0,75,579	0/0:25,0:25:56.72:0,57,438	0/1:12,1:13:0.58:1,0,176
chr10	25711557	.	C	CT	5089.57	PASS	AB=0.676;AC=39;AF=0.696;AN=56;BaseQRankSum=-5.871;DP=530;FS=4.965;HRun=13;HaplotypeScore=74.5019;InbreedingCoeff=0.3839;MQ=73.51;MQ0=0;MQRankSum=-0.534;QD=12.18;ReadPosRankSum=-0.206;VQSLOD=4.7256;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:25:47.26:0,47,297	1/1:3,5:9:8.17:106,8,0	0/0:15,0:14:14.73:0,15,95	0/1:10,0:8:13.17:13,0,30	1/1:6,19:26:5.21:309,5,0	0/1:6,11:19:8.78:175,0,9	1/1:2,9:11:9.01:84,9,0	0/0:20,0:24:41.63:0,42,251	1/1:3,5:8:14.97:130,15,0	0/1:12,19:33:10.14:452,0,10	1/1:6,14:21:40.11:343,40,0	0/1:9,6:15:8.10:73,0,8	0/1:5,14:19:9.15:163,0,9	0/1:6,11:17:5.56:97,0,6	0/0:15,0:18:19.15:0,19,179	1/1:6,14:20:18.90:308,19,0	0/0:26,1:29:24.69:0,25,302	1/1:4,21:25:34.71:418,35,0	0/1:9,12:22:24.89:300,0,25	1/1:13,11:25:26.82:229,27,0	1/1:3,9:12:21.02:195,21,0	1/1:3,13:16:14.29:249,14,0	1/1:5,8:13:15.02:139,15,0	1/1:10,11:21:5.79:279,6,0	1/1:4,14:18:6.45:202,6,0	1/1:11,12:24:12.29:245,12,0	1/1:3,19:23:24.77:357,25,0	1/1:2,9:11:24.03:223,24,0
chr10	25712111	.	C	CTTTTT	5719.31	PASS	AB=1.000;AC=46;AF=0.821;AN=56;BaseQRankSum=3.088;DP=343;FS=18.507;HRun=11;HaplotypeScore=78.3079;InbreedingCoeff=0.6206;MQ=62.08;MQ0=1;MQRankSum=-6.354;QD=22.88;ReadPosRankSum=-3.636;VQSLOD=0.6460;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:18:25.43:0,25,169	1/1:2,1:8:10.85:167,11,0	0/1:19,0:13:11.85:12,0,228	0/1:9,0:8:6.87:7,0,150	1/1:4,3:16:24.08:512,24,0	1/1:7,7:16:12.04:255,12,0	1/1:5,5:10:14.73:280,15,0	0/0:29,0:33:58.75:0,59,772	1/1:6,0:6:12.55:123,13,0	1/1:5,10:17:36.10:628,36,0	1/1:10,0:10:11.95:178,12,0	1/1:5,0:5:5.84:118,6,0	1/1:1,0:7:6.02:131,6,0	1/1:8,0:8:17.16:114,17,0	0/0:13,0:13:39.08:0,39,560	1/1:3,0:4:8.63:100,9,0	0/0:28,0:27:75.15:0,75,1154	1/1:4,1:12:6.02:143,6,0	1/1:12,0:14:30.70:619,31,0	1/1:7,0:8:16.54:187,17,0	1/1:3,1:8:9.03:129,9,0	1/1:7,0:7:15.05:248,15,0	1/1:3,0:7:6.02:128,6,0	1/1:5,0:5:4.79:27,5,0	1/1:8,1:17:24.08:501,24,0	1/1:1,0:16:39.11:636,39,0	1/1:7,2:16:12.04:251,12,0	1/1:2,0:5:9.03:225,9,0
chr10	25712122	.	TGTATTTC	T	1200.63	PASS	AB=0.954;AC=16;AF=0.286;AN=56;BaseQRankSum=2.651;DP=329;FS=30.284;HRun=0;HaplotypeScore=79.8180;InbreedingCoeff=-0.2411;MQ=65.16;MQ0=1;MQRankSum=-4.813;QD=7.46;ReadPosRankSum=-1.935;VQSLOD=-0.4609;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:20:42.88:284,43,0	0/0:5,0:5:8.95:0,9,138	0/1:18,0:15:6.16:6,0,907	0/0:12,0:10:5.28:0,5,430	0/0:11,0:11:22.63:0,23,665	0/0:12,0:12:15.05:0,15,479	0/0:9,0:9:7.44:0,7,342	0/0:30,0:30:84.18:0,84,2305	0/1:4,0:4:39.70:40,0,113	0/1:14,0:15:99:247,0,583	0/1:4,8:12:22.13:22,0,261	0/1:5,0:5:27.97:28,0,132	0/0:9,0:9:15.05:0,15,331	0/1:10,0:10:76.60:77,0,275	0/0:17,0:17:51.17:0,51,1621	0/1:5,0:5:11.07:11,0,246	0/0:30,0:29:87.30:0,87,2850	0/0:8,0:8:6.91:0,7,141	0/1:15,0:15:99:144,0,656	0/1:8,0:8:99:100,0,162	0/1:9,0:9:30.78:31,0,220	0/1:8,0:9:99:187,0,150	0/0:8,0:8:12.01:0,12,306	0/1:6,0:6:34.47:34,0,213	0/1:12,0:12:4.48:4,0,642	0/1:9,0:9:99:144,0,333	0/0:13,0:13:17.87:0,18,512	0/0:4,0:4:8.62:0,9,179
chr10	25712125	.	ATTTC	A	725.41	PASS	AB=1.000;AC=4;AF=0.071;AN=56;BaseQRankSum=4.342;DP=323;FS=1.653;HRun=0;HaplotypeScore=66.3843;InbreedingCoeff=0.4262;MQ=65.92;MQ0=1;MQRankSum=-4.164;QD=19.09;ReadPosRankSum=-1.595;VQSLOD=3.1711;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,16:20:51.05:819,51,0	0/0:4,0:4:9.03:0,9,152	0/0:20,0:16:30.01:0,30,872	0/0:13,0:11:20.04:0,20,337	0/0:12,0:12:24:0,24,529	0/0:8,0:8:15.05:0,15,364	0/0:8,0:8:14.98:0,15,265	0/0:29,0:29:78.25:0,78,1806	0/0:4,0:4:8.39:0,8,109	0/0:12,0:12:27.43:0,27,587	0/0:12,0:12:12.04:0,12,257	0/0:5,0:5:8.65:0,9,123	0/0:8,0:8:15.05:0,15,347	0/0:11,0:11:26.62:0,27,388	0/0:18,0:18:54.18:0,54,1310	0/0:5,0:5:14.99:0,15,276	0/0:31,0:30:84.18:0,84,2037	0/0:8,0:8:8.95:0,9,169	0/0:15,0:15:22.96:0,23,516	0/1:9,0:9:0.80:1,0,232	0/0:10,0:10:14.73:0,15,375	0/1:8,0:8:4.84:5,0,180	0/0:7,0:7:12.04:0,12,292	0/0:8,0:8:17.70:0,18,401	0/0:15,0:15:30.23:0,30,646	0/0:6,0:6:14.98:0,15,313	0/0:12,0:12:17.85:0,18,442	0/0:4,0:4:8.39:0,8,146
chr10	25712288	.	CTA	C	5405.22	PASS	AC=38;AF=0.704;AN=54;BaseQRankSum=3.183;DP=377;FS=20.862;HRun=0;HaplotypeScore=76.9099;InbreedingCoeff=0.8627;MQ=76.76;MQ0=14;MQRankSum=-3.578;QD=26.11;ReadPosRankSum=1.551;VQSLOD=3.9929;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:81.74:0,82,1219	1/1:3,0:3:6.02:89,6,0	0/0:28,0:15:33.18:0,33,788	0/0:35,0:28:72.26:0,72,1366	1/1:8,1:8:18.06:259,18,0	1/1:17,1:18:18.04:244,18,0	1/1:18,1:17:36.11:501,36,0	0/0:22,0:22:63.21:0,63,1077	1/1:13,2:15:29.88:371,30,0	1/1:6,5:10:27.98:385,28,0	1/1:1,11:12:2.99:24,3,0	1/1:10,0:10:18.06:262,18,0	1/1:8,0:8:18.03:242,18,0	1/1:11,0:11:15.05:208,15,0	0/0:11,0:11:30.10:0,30,477	1/1:4,0:4:9.03:127,9,0	0/0:21,0:20:57.18:0,57,863	1/1:6,0:6:18.02:236,18,0	1/1:8,0:8:21.02:269,21,0	./.	1/1:15,0:13:21.07:300,21,0	0/0:1,4:4:0.47:0,0,1	0/0:3,7:9:0.47:0,0,1	1/1:27,1:26:57.19:803,57,0	1/1:9,0:9:24.07:345,24,0	1/1:1,8:9:21.93:284,22,0	1/1:6,0:5:15.05:208,15,0	1/1:6,0:6:18.06:250,18,0
chr10	25712353	.	AC	A	2672.41	PASS	AB=0.593;AC=36;AF=0.692;AN=52;BaseQRankSum=6.612;DP=412;FS=145.898;HRun=1;HaplotypeScore=31.5807;InbreedingCoeff=0.5209;MQ=68.38;MQ0=108;MQRankSum=-3.180;QD=10.52;ReadPosRankSum=0.119;VQSLOD=0.2163;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:33.08:0,33,403	1/1:1,3:1:3.01:40,3,0	0/0:29,0:19:57.18:0,57,714	0/0:27,0:22:63.17:0,63,778	0/1:5,15:13:5.09:367,0,5	1/1:8,4:4:6.02:80,6,0	1/1:5,14:8:24.08:319,24,0	0/0:18,0:18:53.92:0,54,624	1/1:6,7:6:8.98:90,9,0	1/1:7,10:6:15.01:199,15,0	1/1:5,11:7:9.03:120,9,0	1/1:4,10:5:12.04:162,12,0	1/1:3,9:4:9.03:120,9,0	1/1:3,11:4:6.02:80,6,0	0/0:19,0:19:48:0,48,608	0/1:4,8:3:28.68:34,0,29	0/0:14,1:14:35.85:0,36,453	0/1:4,7:4:31.15:31,0,41	1/1:3,8:5:15.05:200,15,0	1/1:2,4:3:9.03:120,9,0	0/1:7,16:12:13.61:109,0,14	1/1:3,7:7:18.06:240,18,0	1/1:3,8:6:15.05:200,15,0	./.	1/1:1,3:2:6.02:79,6,0	1/1:2,11:7:17.72:222,18,0	1/1:5,7:3:3.90:42,4,0	./.
chr10	25712478	.	CTTCCAATG	C	20907.09	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=10.003;DP=456;FS=15.794;HRun=0;HaplotypeScore=151.6176;InbreedingCoeff=0.9459;MQ=75.51;MQ0=0;MQRankSum=-10.661;QD=53.47;ReadPosRankSum=3.213;VQSLOD=4.0804;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,9:14:15.05:361,15,0	1/1:2,6:8:15.05:407,15,0	0/0:18,0:18:39.13:0,39,1504	0/0:21,0:21:51.17:0,51,1846	1/1:3,14:17:30.57:767,31,0	1/1:2,15:17:36.12:930,36,0	1/1:2,13:15:30.10:813,30,0	1/1:5,21:26:63.16:1344,63,0	1/1:6,13:19:42.14:1139,42,0	1/1:1,11:12:30.09:673,30,0	1/1:0,15:15:42.14:1092,42,0	1/1:1,11:12:21.07:569,21,0	1/1:1,14:15:36.12:960,36,0	1/1:1,18:19:45.15:1219,45,0	0/0:26,0:25:72.25:0,72,2958	1/1:1,17:18:45.15:1220,45,0	1/1:8,14:22:21.07:526,21,0	1/1:4,4:8:12.04:325,12,0	1/1:3,5:8:15.05:368,15,0	1/1:3,25:28:66.18:1587,66,0	1/1:7,4:11:12.04:325,12,0	1/1:1,17:18:44.89:1172,45,0	1/1:1,12:13:21.07:569,21,0	1/1:2,5:7:12.04:325,12,0	1/1:2,13:15:36.12:967,36,0	1/1:7,24:31:72.22:1704,72,0	1/1:2,13:15:36.12:976,36,0	1/1:1,7:8:21.07:569,21,0
chr10	25715410	.	G	GGT	366.22	PASS	AB=0.919;AC=12;AF=0.222;AN=54;BaseQRankSum=-0.781;DP=637;FS=0.000;HRun=0;HaplotypeScore=120.5258;InbreedingCoeff=0.2085;MQ=63.26;MQ0=15;MQRankSum=-4.691;QD=1.51;ReadPosRankSum=-4.143;VQSLOD=0.8759;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:27,7:34:35.40:35,0,56	0/0:4,0:6:5.68:0,6,28	./.	0/1:24,0:14:0:0,0,0	0/0:33,0:34:20.76:0,21,195	0/0:23,0:26:14.37:0,14,143	0/0:20,0:21:8.55:0,9,75	1/1:30,0:30:28.83:217,29,0	0/0:26,0:26:9.02:0,9,97	0/1:22,0:22:25.46:35,0,25	0/0:11,0:11:9.02:0,9,98	0/0:23,0:25:9.01:0,9,97	0/0:18,0:18:2.99:0,3,32	0/0:20,0:20:9.02:0,9,97	0/1:16,10:27:31.42:118,0,31	0/0:27,0:27:17.78:0,18,174	1/1:18,0:18:8.20:44,8,0	0/1:18,0:18:11.90:12,0,26	0/0:17,0:15:3.01:0,3,32	0/0:24,0:24:17.92:0,18,166	1/1:28,3:31:0.88:41,1,0	0/0:22,0:23:29.79:0,30,298	0/0:17,0:19:5.84:0,6,46	0/1:35,1:34:4.89:5,0,331	0/0:26,0:26:21.03:0,21,212	0/0:18,0:18:2.99:0,3,25	0/0:19,0:19:14.72:0,15,161	0/0:5,0:5:2.99:0,3,24
chr10	25715571	.	TAC	T	964.65	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.195;DP=658;FS=0.000;HRun=0;HaplotypeScore=76.8454;InbreedingCoeff=0.9964;MQ=85.33;MQ0=0;MQRankSum=-3.675;QD=34.45;ReadPosRankSum=1.541;VQSLOD=5.6905;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,28:28:72.24:1060,72,0	0/0:8,0:8:24.08:0,24,449	0/0:15,0:15:43.37:0,43,678	0/0:26,0:26:69.16:0,69,1128	0/0:30,0:30:90.29:0,90,1635	0/0:30,0:30:87.28:0,87,1581	0/0:33,0:33:93.32:0,93,1718	0/0:23,0:23:66.23:0,66,1236	0/0:26,0:26:75.24:0,75,1371	0/0:21,0:21:63.22:0,63,1174	0/0:17,0:17:51.17:0,51,953	0/0:39,0:39:99:0,108,1990	0/0:18,0:18:54.14:0,54,945	0/0:25,0:25:66.23:0,66,1232	0/0:34,0:34:96.33:0,96,1789	0/0:25,0:25:69.24:0,69,1292	0/0:17,0:17:51.17:0,51,941	0/0:19,0:19:51.15:0,51,922	0/0:11,0:11:30.09:0,30,520	0/0:20,0:20:60.21:0,60,1123	0/0:35,0:35:96.25:0,96,1688	0/0:18,0:18:54.19:0,54,1009	0/0:10,0:10:27.09:0,27,503	0/0:30,0:30:87.26:0,87,1582	0/0:23,0:23:66.22:0,66,1213	0/0:34,0:34:96.32:0,96,1759	0/0:28,0:28:84.29:0,84,1560	0/0:15,0:15:45.13:0,45,809
chr10	25717300	.	G	GGT	16501.28	PASS	AB=0.585;AC=40;AF=0.714;AN=56;BaseQRankSum=-10.250;DP=723;FS=1.948;HRun=0;HaplotypeScore=95.6198;InbreedingCoeff=0.0965;MQ=70.02;MQ0=8;MQRankSum=-3.630;QD=26.32;ReadPosRankSum=2.835;VQSLOD=6.0779;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:27:23.45:222,23,0	0/1:4,10:14:9.10:358,0,9	0/0:36,0:28:50.84:0,51,563	0/0:31,0:25:40.12:0,40,484	1/1:8,21:29:56.92:913,57,0	0/1:6,20:25:14.20:762,0,14	0/1:10,18:31:14.68:581,0,15	1/1:11,23:36:27.87:1044,28,0	1/1:9,16:25:23.61:685,24,0	0/1:16,19:35:66.53:908,0,67	0/1:4,15:19:21.61:491,0,22	1/1:5,20:27:15.89:900,16,0	1/1:5,14:18:33.11:528,33,0	1/1:8,14:22:2.95:540,3,0	0/0:26,0:28:68.86:0,69,778	0/1:2,11:14:3.08:427,0,3	1/1:7,12:19:30.10:470,30,0	0/1:10,19:29:81.07:757,0,81	1/1:7,9:17:0.54:442,1,0	1/1:8,16:24:5.90:549,6,0	1/1:12,31:45:82.24:1453,82,0	1/1:7,15:22:36.12:578,36,0	0/1:4,22:25:15.01:762,0,15	0/1:9,33:42:87.63:1159,0,88	1/1:2,12:14:24.08:385,24,0	1/1:8,20:29:32.98:947,33,0	1/1:5,12:21:16.86:597,17,0	0/1:4,4:8:30.13:42,0,30
chr10	25717861	.	AT	A	17491.30	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-1.669;DP=573;FS=16.303;HRun=2;HaplotypeScore=66.8869;InbreedingCoeff=0.9933;MQ=91.18;MQ0=0;MQRankSum=-8.707;QD=35.12;ReadPosRankSum=3.253;VQSLOD=3.5334;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,29:30:75.15:951,75,0	1/1:0,8:8:24.08:311,24,0	0/0:24,1:25:42.83:0,43,844	0/0:27,0:27:72.22:0,72,1042	1/1:0,12:12:36.12:466,36,0	1/1:0,25:25:69.22:895,69,0	1/1:0,23:23:54.18:700,54,0	1/1:2,37:39:99:1409,111,0	1/1:0,19:19:48.10:603,48,0	1/1:0,18:18:54.17:688,54,0	1/1:0,6:6:15.05:193,15,0	1/1:1,25:26:69.22:895,69,0	1/1:0,26:26:75.24:970,75,0	1/1:0,17:17:51.17:661,51,0	0/0:23,0:23:69.23:0,69,1033	1/1:0,32:32:69.22:895,69,0	1/1:0,21:21:57.19:740,57,0	1/1:0,15:15:39.13:504,39,0	1/1:0,15:15:45.14:575,45,0	1/1:0,18:18:45.15:584,45,0	1/1:1,29:30:81.26:1052,81,0	1/1:0,10:10:30.10:389,30,0	1/1:0,14:14:42.14:545,42,0	1/1:0,30:30:81.26:1051,81,0	1/1:0,15:15:45.15:584,45,0	1/1:0,12:12:36.12:467,36,0	1/1:0,25:25:69.22:895,69,0	1/1:0,12:12:36.12:467,36,0
chr10	25718477	.	T	TAAAAAA	21588.87	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-1.819;DP=557;FS=0.570;HRun=9;HaplotypeScore=137.4484;InbreedingCoeff=0.9405;MQ=58.10;MQ0=1;MQRankSum=-9.438;QD=43.79;ReadPosRankSum=-1.789;VQSLOD=2.0649;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:17,2:26:26.53:498,27,0	1/1:3,8:11:21.07:648,21,0	0/0:15,0:15:30.03:0,30,539	0/0:12,0:11:26.20:0,26,339	1/1:8,19:27:57.96:1297,58,0	1/1:11,9:27:57.13:1460,57,0	1/1:10,7:21:33.11:947,33,0	1/1:30,0:29:27.08:607,27,0	1/1:9,10:19:30.57:933,31,0	1/1:16,9:27:51.23:1354,51,0	1/1:17,0:17:18.06:470,18,0	1/1:8,13:22:30.10:858,30,0	1/1:11,14:28:51.17:1555,51,0	1/1:7,11:19:36.12:1125,36,0	0/0:36,0:36:90.14:0,90,1636	1/1:8,9:18:33.11:970,33,0	1/1:14,0:17:24.08:601,24,0	1/1:6,7:15:21.03:525,21,0	1/1:8,2:15:25.28:520,25,0	1/1:8,2:20:36.08:853,36,0	1/1:3,3:6:7.27:162,7,0	1/1:8,7:18:41.17:1098,41,0	1/1:10,9:25:51.08:1317,51,0	1/1:4,5:14:18.06:462,18,0	1/1:8,8:21:33.11:931,33,0	1/1:10,7:21:42.14:1013,42,0	1/1:12,10:22:36.12:1103,36,0	1/1:2,3:6:9.03:282,9,0
chr10	25718940	.	A	ACAAAATG	2271.38	PASS	AB=0.892;AC=14;AF=0.250;AN=56;BaseQRankSum=6.769;DP=706;FS=21.859;HRun=0;HaplotypeScore=248.3165;InbreedingCoeff=-0.3283;MQ=42.07;MQ0=76;MQRankSum=-6.688;QD=6.07;ReadPosRankSum=4.683;VQSLOD=0.8515;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:38:99:0,105,1946	0/0:11,0:8:15.87:0,16,167	0/0:34,0:23:69.09:0,69,1627	0/0:28,0:17:51.14:0,51,1239	0/0:33,1:26:22.06:0,22,488	0/1:15,2:13:99:99,0,445	0/0:14,2:12:21.07:0,21,511	0/0:7,0:6:15.05:0,15,352	0/1:28,5:30:99:341,0,877	0/1:36,1:27:99:141,0,1348	0/0:20,1:14:4.39:0,4,587	0/1:31,5:34:99:445,0,993	0/1:25,4:23:85.95:86,0,725	0/1:41,1:40:72.16:72,0,1212	0/1:19,0:19:14.06:14,0,678	0/1:32,3:29:99:115,0,444	0/1:10,0:10:0.30:0,0,382	0/1:7,4:10:99:348,0,241	0/0:19,1:12:26.93:0,27,686	0/1:28,1:18:99:146,0,707	0/0:23,0:18:33.97:0,34,699	0/0:24,1:19:26.92:0,27,683	0/0:29,1:18:22.32:0,22,482	0/1:15,5:18:99:215,0,214	0/1:31,5:24:99:189,0,890	0/0:29,0:25:58.58:0,59,1129	0/1:12,4:14:99:212,0,443	0/0:11,1:10:18.07:0,18,199
chr10	25718947	.	G	GGGAGAAC	21840.49	PASS	AB=0.858;AC=36;AF=0.643;AN=56;BaseQRankSum=0.561;DP=776;FS=5.992;HRun=0;HaplotypeScore=230.0680;InbreedingCoeff=-0.1120;MQ=37.77;MQ0=104;MQRankSum=-6.406;QD=32.40;ReadPosRankSum=0.788;VQSLOD=4.1322;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:35:99:0,99,2346	1/1:2,3:9:17.58:490,18,0	0/0:36,0:18:47.19:0,47,1186	0/0:28,0:12:36.07:0,36,770	1/1:21,3:20:14.68:300,15,0	0/1:17,1:13:62.13:554,0,62	0/1:18,0:13:34.80:258,0,35	0/1:9,0:7:10.99:11,0,46	1/1:25,7:29:46.04:1948,46,0	0/1:32,3:28:99:956,0,115	1/1:20,1:14:11.99:313,12,0	0/1:28,8:36:95.71:2061,0,96	0/1:31,6:28:39.43:1291,0,39	1/1:25,15:37:1.18:2734,1,0	1/1:24,0:23:47.88:1167,48,0	0/1:20,12:27:38.09:1659,0,38	1/1:20,0:20:50.95:1108,51,0	0/1:13,1:12:26.01:327,0,26	0/1:24,1:14:86.10:376,0,86	1/1:22,1:17:27:664,27,0	0/1:23,1:18:68.06:351,0,68	1/1:21,3:18:18.09:926,18,0	1/1:19,4:18:26.56:650,27,0	0/1:20,2:17:29.06:535,0,29	0/1:30,2:22:38.53:771,0,39	0/1:22,6:27:57.13:996,0,57	0/1:17,2:19:37.23:709,0,37	1/1:11,5:10:20.90:684,21,0
chr10	25718948	.	A	AGAAGG	5435.02	PASS	AB=0.970;AC=25;AF=0.446;AN=56;BaseQRankSum=11.108;DP=782;FS=11.194;HRun=0;HaplotypeScore=254.3192;InbreedingCoeff=-0.5480;MQ=37.56;MQ0=107;MQRankSum=-4.745;QD=8.68;ReadPosRankSum=7.125;VQSLOD=2.0854;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:34:96.18:0,96,1973	1/1:10,0:8:7.59:118,8,0	0/0:39,0:18:51.14:0,51,972	0/0:29,0:12:30.10:0,30,588	0/1:32,0:22:52.63:53,0,59	0/1:20,0:13:41.98:42,0,184	0/0:21,0:13:14.03:0,14,138	0/1:10,0:7:63.51:113,0,64	0/1:38,0:29:99:589,0,152	0/1:39,0:28:87.43:87,0,447	0/1:19,0:12:26.63:27,0,89	0/1:42,0:36:99:495,0,264	0/1:39,0:28:99:258,0,206	0/1:43,0:37:99:487,0,233	0/1:17,8:24:26.68:822,0,27	0/1:39,0:27:57.21:454,0,57	0/1:15,5:20:56.96:711,0,57	0/1:15,0:13:72.91:73,0,74	0/0:27,0:14:4.40:0,4,285	0/1:25,0:15:99:128,0,112	0/1:25,0:18:52.59:53,0,199	0/1:26,0:18:67.56:68,0,232	0/1:28,0:18:25.50:81,0,25	0/1:22,0:18:18.78:136,0,19	0/1:34,0:22:99:138,0,194	0/1:30,0:26:78.09:78,0,332	0/1:24,0:20:63.83:221,0,64	1/1:15,0:9:18.03:203,18,0
chr10	25719028	.	G	GAAC	322.82	PASS	AB=0.893;AC=9;AF=0.173;AN=52;BaseQRankSum=4.174;DP=417;FS=21.981;HRun=0;HaplotypeScore=92.7710;InbreedingCoeff=-0.0964;MQ=23.50;MQ0=99;MQRankSum=-2.560;QD=2.11;ReadPosRankSum=-0.611;VQSLOD=-0.0953;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,0:6:3.01:43,3,0	0/0:4,1:1:3.01:0,3,53	0/0:20,0:4:8.98:0,9,125	0/0:25,0:9:23.97:0,24,328	0/0:8,2:4:2.50:0,2,9	0/1:6,0:3:0.78:1,0,48	0/0:14,1:9:3.01:0,3,53	0/0:7,0:6:11.23:0,11,120	0/1:18,1:13:12.55:13,0,299	0/0:13,1:5:2.73:0,3,53	./.	0/0:22,0:20:29.03:0,29,433	0/1:27,2:18:68.20:68,0,296	0/0:21,0:15:29.98:0,30,457	0/0:5,0:9:15.05:0,15,247	0/1:21,3:17:64.09:64,0,354	0/0:6,0:6:11.87:0,12,167	0/0:5,0:5:11.87:0,12,110	0/0:20,0:7:14.81:0,15,190	0/0:8,0:1:3.01:0,3,53	0/1:17,4:16:36.46:36,0,247	0/0:19,1:4:9.03:0,9,141	./.	0/1:16,6:20:99:125,0,304	0/0:8,0:1:2.98:0,3,21	0/0:18,0:9:9.03:0,9,158	0/1:19,2:19:96.94:97,0,372	0/0:11,0:6:10.81:0,11,139
chr10	25719064	.	A	AG	2529.69	PASS	AB=0.868;AC=23;AF=0.442;AN=52;BaseQRankSum=-1.348;DP=778;FS=0.929;HRun=1;HaplotypeScore=177.1856;InbreedingCoeff=-0.5925;MQ=30.16;MQ0=139;MQRankSum=0.196;QD=3.71;ReadPosRankSum=-0.317;VQSLOD=-0.1846;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:4,0:4:0:0,0,0	0/1:4,1:4:32.86:33,0,86	0/0:32,0:15:45.11:0,45,541	0/0:25,0:9:24.08:0,24,311	0/1:24,2:14:56.69:57,0,140	0/1:19,8:20:70.27:70,0,195	0/1:21,7:20:99:227,0,184	./.	0/1:30,10:29:99:247,0,317	0/1:33,11:26:99:338,0,369	0/0:14,0:8:14.86:0,15,149	0/1:32,4:34:99:100,0,543	0/1:39,4:32:45.86:46,0,473	0/1:51,5:40:89.98:90,0,514	./.	0/1:46,12:44:99:243,0,678	1/1:2,0:2:2.37:8,2,0	0/1:11,5:14:99:189,0,195	0/1:27,7:15:99:243,0,148	0/1:18,2:14:33.39:33,0,171	0/1:42,13:45:99:369,0,323	0/1:33,3:19:28.96:29,0,223	0/0:18,1:11:20.09:0,20,193	0/1:27,2:26:0.22:0,0,301	0/1:21,5:18:99:134,0,248	0/1:24,3:17:84.61:85,0,266	0/1:46,4:42:79.42:79,0,730	0/1:18,2:14:54.27:54,0,222
chr10	25719065	.	G	GAAC	1997.20	PASS	AB=0.962;AC=20;AF=0.385;AN=52;BaseQRankSum=6.442;DP=803;FS=4.314;HRun=0;HaplotypeScore=216.2195;InbreedingCoeff=-0.5100;MQ=32.37;MQ0=154;MQRankSum=-5.569;QD=3.10;ReadPosRankSum=-2.911;VQSLOD=2.0800;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:4:2.97:0,3,20	0/0:4,1:4:8.97:0,9,126	0/0:34,0:17:44.93:0,45,721	0/0:25,0:9:23.81:0,24,366	0/1:24,2:16:99:135,0,207	0/1:28,0:21:99:157,0,196	0/0:28,0:20:41.83:0,42,516	./.	0/1:40,1:29:87.50:87,0,644	0/1:43,2:27:93.67:94,0,689	0/1:13,0:8:46.98:47,0,144	0/1:36,1:34:47.80:48,0,777	0/1:45,0:34:99:153,0,646	0/1:59,3:40:99:381,0,734	./.	0/1:57,3:44:99:209,0,1079	1/1:2,0:2:3.01:33,3,0	0/1:17,0:14:21.99:22,0,334	0/1:33,0:15:4.57:5,0,378	0/1:19,1:14:95.04:95,0,273	0/1:48,5:45:99:205,0,713	0/0:37,0:19:14.85:0,15,371	0/1:19,1:12:99:107,0,190	0/1:28,0:26:28.53:29,0,571	0/1:26,0:18:28.57:29,0,436	0/1:26,2:17:99:232,0,376	0/1:52,1:44:82.86:83,0,1156	0/0:20,0:14:36.10:0,36,579
chr10	25719101	.	AG	A	4973.12	PASS	AB=0.894;AC=24;AF=0.429;AN=56;BaseQRankSum=1.122;DP=1791;FS=4.538;HRun=2;HaplotypeScore=313.6730;InbreedingCoeff=-0.6275;MQ=29.12;MQ0=422;MQRankSum=-4.036;QD=2.98;ReadPosRankSum=-1.387;VQSLOD=0.2281;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:10,4:8:20.94:214,21,0	0/1:29,2:20:99:102,0,356	0/0:52,1:13:33.11:0,33,460	0/0:36,4:11:24.04:0,24,325	0/1:51,3:37:99:113,0,489	0/1:71,11:48:99:182,0,800	0/1:65,10:45:91.28:91,0,644	0/0:12,2:3:9.03:0,9,135	0/1:91,11:60:99:284,0,1053	0/1:94,6:73:99:165,0,1900	0/1:45,3:36:99:129,0,469	0/1:75,19:53:99:307,0,913	0/1:100,11:64:99:231,0,1193	0/1:104,18:66:99:422,0,1216	0/0:11,0:6:9.01:0,9,106	0/1:114,12:63:99:333,0,1257	0/0:6,0:5:6.86:0,7,67	0/1:27,10:25:99:201,0,328	0/1:86,6:42:99:105,0,1147	0/1:56,6:48:99:236,0,677	0/1:60,14:55:99:261,0,871	0/1:56,5:45:99:150,0,559	0/1:48,4:35:72.24:72,0,392	0/1:40,8:35:99:221,0,189	0/1:62,10:49:99:206,0,622	0/1:73,5:41:99:144,0,734	0/1:92,13:75:99:616,0,1080	0/1:19,6:23:99:188,0,334
chr10	25719103	.	GA	G	6312.47	PASS	AB=0.834;AC=24;AF=0.429;AN=56;BaseQRankSum=-1.074;DP=1788;FS=3.641;HRun=1;HaplotypeScore=302.0250;InbreedingCoeff=-0.6291;MQ=29.03;MQ0=424;MQRankSum=-3.734;QD=3.80;ReadPosRankSum=-0.707;VQSLOD=0.6712;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,10:8:20.84:197,21,0	0/1:21,9:20:99:122,0,388	0/0:53,0:13:33.05:0,33,462	0/0:43,0:11:24.04:0,24,368	0/1:39,15:37:99:193,0,513	0/1:72,11:48:99:265,0,865	0/1:60,17:46:75.47:75,0,676	0/0:15,0:3:9.03:0,9,144	0/1:76,23:58:99:469,0,1131	0/1:81,18:73:99:386,0,2058	0/1:40,9:37:99:174,0,550	0/1:78,16:52:99:279,0,1006	0/1:88,23:64:99:396,0,1291	0/1:98,23:66:99:523,0,1325	0/0:7,4:6:9.03:0,9,128	0/1:101,24:63:99:493,0,1376	0/0:6,0:5:6.02:0,6,86	0/1:27,10:25:99:123,0,428	0/1:81,8:40:99:180,0,1216	0/1:50,15:49:99:318,0,745	0/1:58,13:53:99:178,0,922	0/1:47,15:46:99:241,0,665	0/1:40,12:36:99:134,0,429	0/1:37,10:34:99:181,0,264	0/1:58,13:48:99:261,0,676	0/1:62,17:42:99:281,0,768	0/1:77,27:74:99:775,0,1161	0/1:25,1:23:67.58:68,0,378
chr10	25719325	.	AG	A	1596.72	PASS	AB=0.909;AC=20;AF=0.435;AN=46;BaseQRankSum=-2.633;DP=2106;FS=2.262;HRun=2;HaplotypeScore=124.7541;InbreedingCoeff=-0.3471;MQ=13.12;MQ0=1379;MQRankSum=-1.168;QD=0.98;ReadPosRankSum=2.307;VQSLOD=-0.6100;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:1,3:4:9:95,9,0	0/1:29,5:9:62.73:63,0,112	./.	./.	1/1:36,6:7:5.95:57,6,0	0/1:77,12:18:85.30:85,0,85	0/0:79,2:8:15.05:0,15,222	./.	0/1:110,14:26:99:255,0,166	0/0:72,3:5:12:0,12,136	0/0:42,5:7:6.01:0,6,68	0/1:133,8:25:75.73:76,0,174	0/1:132,15:25:99:122,0,214	0/1:122,16:22:86.44:86,0,230	./.	0/1:124,18:35:99:161,0,193	./.	0/1:80,9:22:99:146,0,146	0/0:48,6:5:6.02:0,6,87	0/1:68,9:14:41.41:101,0,41	0/1:128,10:20:62.72:63,0,119	0/0:69,4:15:12.03:0,12,132	1/1:53,5:9:5.91:55,6,0	0/1:117,10:34:99:198,0,358	0/1:67,4:20:34.33:68,0,34	0/0:56,6:4:6.02:0,6,90	0/1:126,13:33:34.84:35,0,337	0/1:58,6:15:78.71:79,0,113
chr10	25719358	.	T	TAC	836.17	PASS	AB=0.971;AC=11;AF=0.229;AN=48;BaseQRankSum=1.755;DP=1587;FS=26.957;HRun=0;HaplotypeScore=102.8283;InbreedingCoeff=-0.2303;MQ=14.75;MQ0=899;MQRankSum=-0.621;QD=1.09;ReadPosRankSum=0.959;VQSLOD=-0.1332;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:5:12.04:0,12,176	0/0:28,0:5:2.90:0,3,44	./.	./.	0/0:35,0:5:3.01:0,3,44	0/1:51,1:16:35.74:36,0,207	0/0:62,0:8:12.04:0,12,172	0/0:26,0:4:3.01:0,3,44	0/0:90,0:23:21.07:0,21,309	0/1:48,3:9:88.20:88,0,241	0/0:36,0:6:3.01:0,3,44	0/1:114,5:37:99:250,0,190	0/1:98,1:30:20.16:20,0,411	0/1:89,2:23:87.91:88,0,241	./.	0/1:108,3:46:99:117,0,564	0/0:23,0:8:5.99:0,6,66	0/0:68,0:21:21.07:0,21,308	0/0:43,0:4:6.02:0,6,88	0/0:69,0:11:9.03:0,9,132	0/0:78,0:19:18.06:0,18,254	0/1:50,1:11:43.94:44,0,120	0/0:39,0:8:3.01:0,3,44	0/0:90,0:28:29.58:0,30,380	./.	0/1:40,1:6:45.40:45,0,79	0/1:99,5:35:99:224,0,490	1/1:45,1:10:3.01:56,3,0
chr10	25719632	.	A	AG	8205.28	PASS	AB=0.782;AC=29;AF=0.518;AN=56;BaseQRankSum=10.145;DP=1122;FS=60.215;HRun=1;HaplotypeScore=153.0269;InbreedingCoeff=-0.5072;MQ=35.70;MQ0=167;MQRankSum=-0.483;QD=8.24;ReadPosRankSum=-0.422;VQSLOD=-0.0351;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:13:6:0,6,62	0/1:17,7:16:99:183,0,251	0/0:53,0:30:85.92:0,86,985	0/0:58,0:19:36.18:0,36,521	0/1:42,4:31:99:120,0,403	0/1:14,13:18:54.63:465,0,55	0/1:38,2:28:99:159,0,179	0/1:61,4:38:77.10:77,0,1052	1/1:2,18:19:51.17:755,51,0	0/1:52,8:40:99:349,0,717	0/1:26,4:19:71.72:72,0,98	0/1:9,12:17:38.70:445,0,39	1/1:11,12:16:29.99:396,30,0	1/1:1,11:11:30.10:448,30,0	0/1:70,19:74:99:130,0,2042	1/1:10,20:21:12.38:659,12,0	0/1:45,26:64:99:788,0,1156	0/1:6,10:14:11.79:324,0,12	0/1:84,5:50:63.25:63,0,1184	0/1:30,14:29:99:426,0,268	0/1:30,14:28:56.89:302,0,57	0/1:26,8:22:99:267,0,214	0/1:29,3:19:92.46:92,0,364	0/1:4,11:14:8.86:347,0,9	0/1:38,12:31:99:427,0,340	0/1:46,9:36:99:101,0,752	0/1:12,17:22:25.43:537,0,25	0/1:9,7:12:15.74:272,0,16
chr10	25719735	.	AG	A	805.71	PASS	AB=0.925;AC=21;AF=0.404;AN=52;BaseQRankSum=4.070;DP=1699;FS=0.000;HRun=2;HaplotypeScore=206.4133;InbreedingCoeff=-0.5207;MQ=22.48;MQ0=517;MQRankSum=-2.761;QD=0.70;ReadPosRankSum=2.859;VQSLOD=-0.6435;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:8:11.93:88,12,0	0/0:36,1:16:11.99:0,12,179	./.	./.	0/0:98,2:36:31.06:0,31,604	0/1:36,5:26:50.50:51,0,358	0/0:55,1:24:4.20:0,4,334	0/0:86,0:38:99:0,102,1443	0/1:56,7:35:46.54:47,0,543	0/1:94,4:43:92.68:93,0,1017	0/1:59,3:21:7.91:8,0,165	0/1:49,6:26:32.64:33,0,516	0/1:42,3:24:21.78:22,0,413	0/1:50,4:26:14.96:15,0,469	0/1:74,3:61:10.87:11,0,1655	0/1:51,10:34:62.43:62,0,581	0/0:103,1:86:99:0,137,2337	0/1:33,6:20:80.82:81,0,371	0/1:48,5:22:38.67:39,0,424	0/0:91,5:24:32.80:0,33,394	0/1:50,10:36:99:116,0,486	0/1:75,3:32:61.62:62,0,574	0/1:71,2:23:64.43:64,0,341	0/1:47,3:25:10.75:11,0,384	0/1:80,2:34:35.18:35,0,589	0/1:77,5:49:29.78:30,0,1138	0/1:32,6:23:83.63:84,0,297	0/1:32,1:9:11.93:12,0,81
chr10	25719961	.	G	GAGAGAACAGAGGAA	931.96	PASS	AB=0.975;AC=8;AF=0.154;AN=52;BaseQRankSum=2.401;DP=1277;FS=8.464;HRun=0;HaplotypeScore=361.6850;InbreedingCoeff=0.0210;MQ=27.88;MQ0=255;MQRankSum=-5.363;QD=2.90;ReadPosRankSum=-5.137;VQSLOD=0.0200;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,0:1:2.96:19,3,0	0/0:32,0:23:35.82:0,36,1421	./.	./.	0/0:62,2:48:48.16:0,48,1834	0/1:46,1:34:99:159,0,2058	0/0:37,0:23:27.09:0,27,705	0/1:50,0:26:2.61:3,0,2189	0/0:50,0:39:50.94:0,51,2035	0/0:79,0:56:89.43:0,89,4943	0/1:44,1:29:99:294,0,402	0/0:66,0:45:84.29:0,84,3334	0/0:41,0:30:8.91:0,9,1692	0/0:49,0:37:75.26:0,75,3046	0/0:67,0:62:99:0,147,5241	0/0:60,0:47:91.83:0,92,3620	0/0:36,0:34:96.29:0,96,3689	0/0:38,0:32:60.21:0,60,2271	0/0:30,0:10:20.81:0,21,776	0/1:75,1:52:99:193,0,2270	0/0:47,0:27:44.57:0,45,1428	0/0:35,2:25:0.72:0,1,721	0/1:44,1:28:11.20:11,0,946	0/0:46,0:32:63.13:0,63,2343	0/1:49,4:37:99:377,0,2141	0/0:46,0:24:31.28:0,31,1923	0/0:42,0:35:56.18:0,56,2181	0/0:23,1:19:17.86:0,18,614
chr10	25720989	.	CT	C	164.73	PASS	AB=0.914;AC=4;AF=0.071;AN=56;BaseQRankSum=-5.141;DP=449;FS=0.000;HRun=16;HaplotypeScore=80.8287;InbreedingCoeff=0.5658;MQ=74.07;MQ0=2;MQRankSum=3.896;QD=2.61;ReadPosRankSum=2.645;VQSLOD=-0.5152;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:19.64:0,20,98	0/0:8,0:8:20.61:0,21,129	0/0:36,0:24:7.64:0,8,112	0/1:23,0:11:0.86:12,0,1	0/0:21,0:21:26.21:0,26,155	0/0:16,0:16:29.29:0,29,180	0/0:12,0:12:21.59:0,22,122	0/1:11,1:13:10.12:27,0,10	0/0:11,0:11:21.27:0,21,122	0/0:18,0:18:22.66:0,23,149	0/0:14,0:14:19.21:0,19,110	0/0:15,0:14:23.44:0,23,140	0/0:11,0:11:8.54:0,9,45	0/0:15,0:15:20.25:0,20,114	0/0:16,0:16:22:0,22,127	0/0:13,0:13:29.16:0,29,173	1/1:7,17:25:40.14:239,40,0	0/0:12,0:12:27.24:0,27,154	0/0:18,0:18:20.14:0,20,119	0/0:21,0:21:39.14:0,39,225	0/0:6,0:6:14.61:0,15,86	0/0:14,0:14:19.57:0,20,105	0/0:19,0:19:42.75:0,43,231	0/0:10,0:10:9.05:0,9,49	0/0:11,0:11:23.53:0,24,146	0/0:15,0:15:32.10:0,32,188	0/0:18,0:18:40.39:0,40,225	0/0:17,0:16:14.66:0,15,79
chr10	25721003	.	T	TTTTC	3618.77	PASS	AB=0.998;AC=30;AF=0.536;AN=56;BaseQRankSum=11.113;DP=459;FS=52.744;HRun=0;HaplotypeScore=146.0817;InbreedingCoeff=-0.3156;MQ=70.67;MQ0=2;MQRankSum=-7.042;QD=9.73;ReadPosRankSum=-0.270;VQSLOD=1.1566;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:15:8.69:195,9,0	1/1:8,0:8:20.92:174,21,0	0/0:27,0:18:4.79:0,5,80	0/1:22,0:12:10.04:10,0,82	0/1:23,0:23:52.32:231,0,52	0/1:13,0:13:49.37:144,0,49	0/1:10,0:10:4.67:116,0,5	0/0:12,0:12:8.57:0,9,166	0/1:15,0:15:94.87:149,0,95	0/1:22,0:22:98.59:99,0,146	0/1:14,0:14:16.28:166,0,16	1/1:10,0:9:18.30:131,18,0	0/1:11,0:11:10.66:88,0,11	0/1:18,0:18:73.66:106,0,74	1/1:9,10:23:23.78:241,24,0	0/1:13,0:13:4.59:155,0,5	0/0:31,0:31:71.95:0,72,701	0/1:13,0:13:16.33:170,0,16	0/1:14,0:14:53.16:80,0,53	0/1:23,0:23:63.73:273,0,64	1/1:6,0:6:5.90:38,6,0	0/1:17,0:17:92.64:93,0,105	0/1:20,0:20:46.76:296,0,47	0/1:9,0:9:10.64:101,0,11	1/1:11,0:11:8.56:151,9,0	0/1:20,0:20:99:132,0,131	0/1:21,0:21:74.97:282,0,75	0/0:17,0:16:5.87:0,6,151
chr10	25721606	.	AAG	A	1946.79	PASS	AB=0.750;AC=43;AF=0.827;AN=52;BaseQRankSum=6.801;DP=270;FS=20.441;HRun=0;HaplotypeScore=49.8523;InbreedingCoeff=0.5939;MQ=43.85;MQ0=24;MQRankSum=-5.830;QD=10.58;ReadPosRankSum=1.267;VQSLOD=1.0948;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,11:13:11.78:91,12,0	1/1:3,4:4:6.02:76,6,0	0/0:15,0:7:20.49:0,20,245	0/0:15,0:6:15.04:0,15,265	1/1:2,1:3:5.84:35,6,0	1/1:9,3:11:19.71:154,20,0	1/1:1,8:7:11.99:127,12,0	0/0:17,0:15:45.13:0,45,742	1/1:1,8:7:14.93:130,15,0	1/1:6,4:8:5.45:222,5,0	1/1:6,3:6:10.58:59,11,0	1/1:2,7:6:8.98:85,9,0	1/1:2,4:6:6.45:58,6,0	1/1:1,11:12:17.93:166,18,0	1/1:13,0:13:8.69:40,9,0	1/1:1,8:8:14.97:153,15,0	0/0:29,0:25:63.21:0,63,1125	1/1:3,0:2:5.99:64,6,0	0/1:4,2:6:41.61:143,0,42	./.	1/1:1,6:6:5.93:40,6,0	1/1:1,4:5:11.81:80,12,0	./.	1/1:3,11:11:2.97:20,3,0	1/1:1,7:7:11.87:79,12,0	1/1:1,3:4:9.03:116,9,0	1/1:0,6:6:9.03:112,9,0	1/1:3,6:6:5.98:57,6,0
chr10	25721706	.	AAGAG	A	925.19	PASS	AB=1.000;AC=33;AF=0.635;AN=52;BaseQRankSum=5.970;DP=288;FS=62.436;HRun=0;HaplotypeScore=166.0382;InbreedingCoeff=0.1621;MQ=29.45;MQ0=14;MQRankSum=-4.900;QD=4.82;ReadPosRankSum=0.423;VQSLOD=0.3938;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:2,6:7:8.88:79,9,0	1/1:4,0:4:7.68:44,8,0	0/0:26,0:6:9.02:0,9,142	0/0:27,0:5:9.65:0,10,223	1/1:11,0:10:2.43:72,2,0	0/1:10,0:10:26.49:26,0,37	1/1:11,0:9:7.37:50,7,0	0/0:26,0:23:61.41:0,61,1265	0/1:6,0:6:3.75:4,0,38	0/1:13,0:13:38.48:38,0,41	1/1:11,0:11:17.85:91,18,0	1/1:8,0:7:3.03:33,3,0	0/1:10,0:10:26.59:37,0,27	0/1:13,0:13:46.51:47,0,52	1/1:2,1:3:3.01:37,3,0	1/1:7,0:7:9.38:90,9,0	0/0:11,0:11:15.05:0,15,270	0/0:4,0:2:1.72:0,2,4	1/1:7,0:3:1.77:4,2,0	0/1:15,0:15:28.68:59,0,29	./.	1/1:9,0:9:11.26:98,11,0	1/1:11,0:11:10.83:80,11,0	0/1:6,0:5:0:0,0,0	1/1:6,0:6:8.50:63,8,0	0/1:14,0:14:33.81:76,0,34	0/1:9,0:8:2.75:53,0,3	./.
chr10	25721718	.	AAG	A	2280.09	PASS	AB=0.832;AC=25;AF=0.481;AN=52;BaseQRankSum=1.595;DP=279;FS=64.633;HRun=0;HaplotypeScore=169.3878;InbreedingCoeff=-0.0555;MQ=29.75;MQ0=9;MQRankSum=-2.079;QD=12.60;ReadPosRankSum=6.591;VQSLOD=0.5638;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:8:8.54:0,9,74	1/1:4,0:4:11.36:63,11,0	0/0:18,0:3:2.98:0,3,21	0/0:24,0:5:5.94:0,6,89	1/1:10,1:10:10:120,10,0	0/1:7,2:9:6.07:81,0,6	1/1:7,3:8:14.96:167,15,0	0/0:25,0:22:53.18:0,53,720	0/1:6,0:6:24.76:41,0,25	0/1:8,2:10:16.53:97,0,17	1/1:12,2:15:10.61:202,11,0	0/1:6,2:8:10.99:156,0,11	0/1:9,2:11:5.09:114,0,5	1/1:7,5:12:13.05:208,13,0	0/0:6,0:6:13.74:0,14,69	0/1:8,0:8:32.67:79,0,33	0/0:13,0:13:11.25:0,11,129	1/1:4,0:2:3.01:38,3,0	0/1:5,1:5:33.01:33,0,63	0/1:9,5:14:0.75:200,0,1	./.	0/1:5,4:9:18.57:143,0,19	0/1:9,2:11:14.98:189,0,15	0/0:1,1:2:2.04:0,2,6	0/1:5,1:6:35.53:80,0,36	0/1:12,4:16:30.52:223,0,31	0/1:7,4:10:21.87:209,0,22	./.
chr10	25721728	.	G	GAA	4911.36	PASS	AB=0.818;AC=35;AF=0.673;AN=52;BaseQRankSum=2.031;DP=262;FS=71.787;HRun=1;HaplotypeScore=156.3556;InbreedingCoeff=-0.0717;MQ=28.99;MQ0=9;MQRankSum=-3.174;QD=22.43;ReadPosRankSum=1.732;VQSLOD=1.0648;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:6:0.83:0,1,36	1/1:3,1:4:12.04:205,12,0	0/0:15,0:1:2.98:0,3,21	0/0:20,0:3:6.91:0,7,91	1/1:10,4:13:13.33:323,13,0	0/1:5,1:6:0.22:143,0,0	1/1:7,2:7:15.05:213,15,0	0/1:29,0:23:41.06:41,0,559	0/1:2,1:3:20.12:106,0,20	1/1:6,1:7:0.14:206,0,0	1/1:10,4:14:16.41:435,16,0	1/1:4,4:8:7.18:326,7,0	1/1:6,2:8:4.28:227,4,0	1/1:8,1:9:27.05:358,27,0	0/1:9,0:9:19.14:23,0,19	0/1:6,3:9:15.49:264,0,15	0/1:4,0:11:32.03:32,0,76	1/1:3,1:2:3.01:47,3,0	0/1:5,1:5:62.28:95,0,62	1/1:9,3:12:14.36:373,14,0	./.	0/1:9,1:10:1.81:219,0,2	0/1:9,3:12:5.27:320,0,5	0/1:1,1:2:0:0,0,0	0/1:6,2:7:25.60:203,0,26	1/1:10,4:14:1.12:453,1,0	1/1:10,0:10:4.35:299,4,0	./.
chr10	25721736	.	A	AAG	4485.71	PASS	AB=0.762;AC=33;AF=0.660;AN=50;BaseQRankSum=1.020;DP=255;FS=79.717;HRun=0;HaplotypeScore=159.2961;InbreedingCoeff=-0.1476;MQ=28.44;MQ0=7;MQRankSum=-1.967;QD=23.12;ReadPosRankSum=5.285;VQSLOD=2.2796;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,0:6:13.91:175,14,0	1/1:0,4:4:12.04:208,12,0	./.	0/0:16,0:1:2.22:0,2,7	1/1:7,7:13:32.19:408,32,0	0/1:5,2:7:22.44:125,0,22	0/1:5,4:8:21.67:83,0,22	0/0:29,0:21:36.13:0,36,540	0/1:1,2:3:8.45:100,0,8	0/1:5,2:7:46.68:130,0,47	1/1:6,6:12:6.63:355,7,0	1/1:4,5:9:5.33:289,5,0	1/1:4,4:8:4.59:247,5,0	1/1:6,2:8:1.02:196,1,0	1/1:7,2:9:23.23:311,23,0	0/1:4,5:9:5.49:277,0,5	0/1:11,0:11:6.56:7,0,22	1/1:2,0:1:3.01:35,3,0	0/1:4,1:5:41.96:93,0,42	0/1:9,4:13:20.07:268,0,20	./.	0/1:8,1:9:2.21:112,0,2	0/1:9,5:14:2.83:322,0,3	0/1:1,1:2:0:0,0,0	0/1:5,3:7:18.98:189,0,19	1/1:6,6:12:10.07:362,10,0	0/1:8,3:10:8.14:196,0,8	./.
chr10	25721744	.	A	AAG	1904.25	PASS	AB=0.897;AC=24;AF=0.462;AN=52;BaseQRankSum=0.877;DP=245;FS=29.637;HRun=0;HaplotypeScore=154.1041;InbreedingCoeff=-0.4042;MQ=31.35;MQ0=7;MQRankSum=0.810;QD=11.07;ReadPosRankSum=-3.251;VQSLOD=0.9856;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,0:6:12.39:69,12,0	0/0:4,0:4:6.99:0,7,59	0/0:22,0:2:0:0,0,0	0/0:19,0:3:3.89:0,4,33	0/1:13,2:14:6.87:203,0,7	0/1:6,1:7:1.84:152,0,2	1/1:5,1:5:8.98:84,9,0	0/0:26,0:19:21.06:0,21,321	0/1:2,1:3:5.99:42,0,6	0/1:4,1:5:34.38:98,0,34	0/1:10,1:11:42.64:119,0,43	0/1:7,1:8:44.85:45,0,58	0/1:7,0:7:22.79:82,0,23	0/1:5,0:5:15.17:41,0,15	0/1:7,2:9:88.81:109,0,89	0/1:8,1:9:24.59:150,0,25	0/1:11,0:11:9.32:9,0,27	1/1:2,0:1:2.84:14,3,0	0/1:3,0:3:6.04:6,0,17	0/1:11,1:12:20.41:109,0,20	./.	0/1:8,1:9:6.57:167,0,7	0/1:12,3:15:16.78:245,0,17	0/0:2,0:1:2.99:0,3,24	0/1:5,3:7:12.94:134,0,13	0/1:11,0:11:47.10:120,0,47	0/1:8,1:8:31.77:51,0,32	./.
chr10	25721751	.	AG	A	1283.19	PASS	AB=0.938;AC=26;AF=0.520;AN=50;BaseQRankSum=2.060;DP=228;FS=1.307;HRun=1;HaplotypeScore=145.0904;InbreedingCoeff=-0.3599;MQ=31.36;MQ0=7;MQRankSum=0.077;QD=6.51;ReadPosRankSum=-2.267;VQSLOD=-0.2998;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,5:6:15.54:105,16,0	0/1:4,0:4:0.40:0,0,37	0/1:25,0:2:0:0,0,0	0/0:20,0:3:4.25:0,4,36	0/1:14,1:15:0.91:145,0,1	0/1:5,0:5:8.16:42,0,8	1/1:6,0:5:8.80:60,9,0	0/1:20,3:17:71.63:72,0,205	1/1:3,0:3:0.71:30,1,0	0/1:5,0:5:15.65:25,0,16	0/1:11,0:11:22.45:78,0,22	0/1:7,0:7:55.53:58,0,56	0/1:5,1:6:8.73:80,0,9	0/1:3,1:4:24.14:28,0,24	0/1:9,0:9:24.84:25,0,87	0/1:8,0:8:28.31:42,0,28	0/0:7,1:8:8.56:0,9,68	./.	1/1:2,1:3:5.56:57,6,0	0/1:8,3:11:29.66:65,0,30	./.	0/1:7,1:8:5.90:116,0,6	0/1:12,1:13:16.52:155,0,17	0/0:2,0:1:2.96:0,3,19	0/1:7,1:7:1.46:104,0,1	0/1:10,1:11:15.58:120,0,16	0/1:5,0:4:10.94:11,0,22	./.
chr10	25721752	.	GA	G	1759.35	PASS	AB=0.944;AC=39;AF=0.780;AN=50;BaseQRankSum=3.317;DP=228;FS=17.934;HRun=2;HaplotypeScore=142.9602;InbreedingCoeff=0.2772;MQ=31.28;MQ0=7;MQRankSum=-0.608;QD=8.93;ReadPosRankSum=0.173;VQSLOD=0.0272;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,2:6:13.55:122,14,0	0/1:4,0:4:0.49:21,0,0	0/1:25,0:2:0:0,0,0	0/0:20,0:3:4.26:0,4,47	1/1:10,5:15:22.17:200,22,0	1/1:2,3:5:9.71:115,10,0	1/1:3,2:4:4.12:18,4,0	0/1:25,0:18:3.73:4,0,209	1/1:2,1:3:5.14:40,5,0	1/1:2,3:5:9.13:98,9,0	1/1:7,4:11:15.61:155,16,0	0/1:6,1:7:13:42,0,13	1/1:5,1:6:12.07:89,12,0	1/1:3,1:4:1.41:23,1,0	1/1:7,0:9:1.29:11,1,0	1/1:5,3:8:13.84:112,14,0	0/0:8,0:8:9.03:0,9,117	./.	1/1:2,1:3:6.02:70,6,0	0/1:8,2:11:5.63:79,0,6	./.	1/1:3,5:8:15.88:169,16,0	1/1:7,5:13:19.56:212,20,0	0/0:2,0:1:1.25:0,1,3	1/1:4,4:7:14.35:142,14,0	1/1:7,3:10:0.34:104,0,0	1/1:3,2:4:7.48:57,7,0	./.
chr10	25721753	.	A	AG	5156.33	PASS	AB=1.000;AC=44;AF=0.880;AN=50;BaseQRankSum=2.565;DP=229;FS=33.168;HRun=1;HaplotypeScore=125.5085;InbreedingCoeff=0.4479;MQ=31.21;MQ0=7;MQRankSum=-0.106;QD=25.91;ReadPosRankSum=3.384;VQSLOD=2.8974;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,0:6:15.01:143,15,0	1/1:0,4:4:12.04:178,12,0	0/1:26,0:2:0:0,0,0	0/0:20,0:3:0.36:0,0,37	1/1:7,8:15:35.94:488,36,0	1/1:3,2:5:15.05:231,15,0	1/1:2,3:4:6:59,6,0	0/1:24,0:17:15.75:16,0,186	1/1:1,2:3:9.03:141,9,0	1/1:3,2:5:15.05:210,15,0	1/1:7,6:13:30:411,30,0	1/1:1,6:7:20.74:290,21,0	1/1:2,4:6:17.98:246,18,0	1/1:2,2:4:8.40:124,8,0	1/1:2,7:9:27.05:380,27,0	1/1:3,5:8:24.08:363,24,0	0/0:7,1:8:8.86:0,9,95	./.	1/1:2,0:2:6.02:70,6,0	1/1:6,5:11:10.62:246,11,0	./.	1/1:6,2:8:20.90:286,21,0	1/1:8,4:12:26.30:406,26,0	1/1:1,1:1:3.01:48,3,0	1/1:5,3:7:17.52:267,18,0	1/1:4,6:10:25.97:365,26,0	1/1:2,3:4:12.04:189,12,0	./.
chr10	25721781	.	G	GAA	898.59	PASS	AB=0.975;AC=22;AF=0.407;AN=54;BaseQRankSum=-0.631;DP=256;FS=2.714;HRun=1;HaplotypeScore=136.7767;InbreedingCoeff=-0.3147;MQ=57.73;MQ0=5;MQRankSum=1.319;QD=5.55;ReadPosRankSum=-0.970;VQSLOD=-0.4851;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:4:3.94:0,4,43	0/1:6,0:6:61.66:62,0,106	0/1:38,0:9:10.79:11,0,12	0/0:57,0:23:23.36:0,23,140	0/1:18,0:18:65.11:65,0,218	0/1:5,0:5:42.17:42,0,61	0/0:2,0:2:2.97:0,3,20	0/1:13,0:10:0.67:1,0,64	0/0:1,0:1:2.98:0,3,21	0/0:8,0:8:6.91:0,7,260	0/1:10,0:10:46.28:46,0,211	1/1:3,0:3:0.72:50,1,0	0/1:3,0:3:15.15:44,0,15	1/1:2,0:2:5.91:38,6,0	0/1:3,6:9:18.25:307,0,18	0/1:7,0:7:54.39:54,0,62	0/1:6,0:6:9.48:9,0,19	0/0:3,0:2:6.02:0,6,85	0/1:3,0:2:4.33:16,0,4	0/1:12,0:12:71.89:72,0,170	./.	0/0:12,0:12:6.97:0,7,277	0/1:7,0:7:37.03:37,0,147	1/1:1,0:1:3.01:54,3,0	0/1:7,0:6:34.13:34,0,116	0/1:6,0:6:41.04:41,0,82	0/1:5,0:4:3.95:63,0,4	0/0:5,0:4:8.86:0,9,93
chr10	25721797	.	AATG	A	4110.54	PASS	AB=1.000;AC=45;AF=0.865;AN=52;BaseQRankSum=5.395;DP=228;FS=75.173;HRun=0;HaplotypeScore=113.7882;InbreedingCoeff=0.4974;MQ=60.68;MQ0=6;MQRankSum=-2.111;QD=32.88;ReadPosRankSum=2.529;VQSLOD=0.9050;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,0:2:6.02:85,6,0	1/1:1,4:5:15.04:219,15,0	0/0:37,0:10:16.27:0,16,192	0/0:56,0:23:12.68:0,13,320	1/1:4,7:15:34.57:438,35,0	1/1:2,2:4:8.77:116,9,0	1/1:1,1:2:3.90:54,4,0	0/0:7,0:6:10.63:0,11,44	1/1:0,1:1:3.01:52,3,0	1/1:2,5:8:20.28:317,20,0	1/1:2,6:9:23.44:371,23,0	1/1:0,1:1:3.01:48,3,0	1/1:2,1:3:5.38:60,5,0	1/1:1,0:1:2.37:8,2,0	1/1:8,0:9:12.49:129,12,0	1/1:3,2:5:9.95:117,10,0	0/1:5,0:5:9.82:30,0,10	1/1:0,1:2:6.02:100,6,0	./.	1/1:1,6:12:32.58:444,33,0	./.	1/1:1,8:11:32.47:500,32,0	1/1:2,5:8:17.93:261,18,0	1/1:1,0:1:3.01:32,3,0	1/1:1,5:5:12.04:208,12,0	1/1:1,2:3:9.03:157,9,0	1/1:2,1:3:5.23:59,5,0	1/1:0,5:7:20.96:304,21,0
chr10	25721798	.	AT	A	2304.61	PASS	AB=0.974;AC=49;AF=0.942;AN=52;BaseQRankSum=4.448;DP=217;FS=42.326;HRun=1;HaplotypeScore=111.5948;InbreedingCoeff=0.2103;MQ=64.22;MQ0=6;MQRankSum=-1.939;QD=14.49;ReadPosRankSum=2.461;VQSLOD=1.0910;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,3:2:6:51,6,0	1/1:4,1:5:14.77:106,15,0	0/1:37,1:11:30.86:31,0,148	0/0:58,0:23:10.07:0,10,254	1/1:11,4:15:33.68:271,34,0	1/1:2,1:3:8.94:94,9,0	1/1:1,1:2:3.89:32,4,0	1/1:0,4:4:12:145,12,0	1/1:1,0:1:3.01:32,3,0	1/1:6,1:7:20.44:141,20,0	1/1:7,1:8:23.61:173,24,0	1/1:1,0:1:3:26,3,0	1/1:1,1:2:5.95:58,6,0	1/1:0,1:1:3.01:41,3,0	1/1:1,7:8:12.55:98,13,0	1/1:2,2:4:11.96:125,12,0	1/1:1,4:5:7.64:59,8,0	1/1:2,0:2:5.83:33,6,0	./.	1/1:11,1:12:29.48:205,29,0	./.	1/1:10,1:11:32.47:238,32,0	1/1:6,1:7:15.18:93,15,0	1/1:0,1:1:3.01:33,3,0	1/1:5,1:5:11.85:91,12,0	1/1:2,1:3:8.87:67,9,0	1/1:1,1:2:5.99:62,6,0	1/1:8,0:7:18.09:109,18,0
chr10	25721884	.	T	TA	1109.88	PASS	AB=1.000;AC=23;AF=0.958;AN=24;BaseQRankSum=-1.418;DP=67;FS=0.000;HRun=6;HaplotypeScore=52.4858;InbreedingCoeff=-0.1273;MQ=62.30;MQ0=0;MQRankSum=-1.103;QD=17.34;ReadPosRankSum=0.368;VQSLOD=2.9622;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	1/1:2,1:3:5.98:62,6,0	1/1:4,1:4:3.01:42,3,0	0/1:10,0:8:3.53:69,0,4	1/1:0,5:5:15.05:209,15,0	./.	./.	1/1:3,7:8:8.99:92,9,0	./.	1/1:2,2:3:5.99:64,6,0	1/1:0,4:3:6.02:84,6,0	./.	./.	./.	./.	./.	./.	./.	./.	1/1:3,2:5:3.01:42,3,0	./.	1/1:0,1:1:3.01:42,3,0	1/1:0,4:4:6.02:84,6,0	./.	1/1:0,7:7:18.06:251,18,0	./.	./.	1/1:0,6:5:12:146,12,0
chr10	25721895	.	CT	C	393.45	PASS	AC=12;AF=0.750;AN=16;BaseQRankSum=0.079;DP=41;FS=0.000;HRun=5;HaplotypeScore=40.7384;MQ=61.57;MQ0=0;MQRankSum=-2.302;QD=14.05;ReadPosRankSum=0.556;VQSLOD=1.7229;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:2,0:2:1.82:0,2,5	0/0:3,0:2:2.99:0,3,24	1/1:2,3:5:3.01:34,3,0	./.	./.	1/1:3,5:6:3.01:34,3,0	./.	1/1:0,2:1:3.01:34,3,0	./.	./.	./.	./.	./.	./.	./.	./.	./.	1/1:0,2:2:6.02:68,6,0	./.	./.	./.	./.	1/1:0,7:7:18.05:204,18,0	./.	./.	1/1:1,3:3:9.03:102,9,0
chr10	25726563	.	G	GA	2165.81	PASS	AB=0.870;AC=36;AF=0.692;AN=52;BaseQRankSum=3.249;DP=541;FS=2.089;HRun=10;HaplotypeScore=119.8927;InbreedingCoeff=-0.0534;MQ=33.26;MQ0=47;MQRankSum=-2.426;QD=4.39;ReadPosRankSum=-3.855;VQSLOD=0.6621;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:22:3.06:20,3,0	1/1:5,4:8:8.52:93,9,0	./.	./.	1/1:11,7:17:19.24:143,19,0	0/1:7,6:12:12.16:97,0,12	1/1:13,4:12:15.20:125,15,0	0/0:32,0:25:38.60:0,39,307	0/1:16,2:16:52.90:53,0,133	0/1:30,5:33:12.61:135,0,13	0/1:17,7:23:4.37:196,0,4	0/1:18,2:16:23.03:23,0,40	1/1:7,5:9:9.02:95,9,0	0/1:20,1:20:4.30:4,0,84	1/1:16,0:15:5.93:44,6,0	1/1:9,9:17:21.91:212,22,0	0/1:37,0:29:17.77:18,0,175	0/0:14,0:7:5.70:0,6,44	0/1:17,1:15:15.69:64,0,16	1/1:13,5:15:9.02:94,9,0	1/1:13,2:14:7.26:66,7,0	1/1:14,6:18:6.56:51,7,0	0/1:30,7:34:6.40:199,0,6	0/1:18,6:18:46.29:75,0,46	1/1:15,12:26:36.10:295,36,0	0/1:19,0:14:12.68:13,0,40	1/1:11,8:17:6.90:204,7,0	0/1:4,1:4:0:0,0,0
chr10	25726573	.	AG	A	2191.36	PASS	AB=0.900;AC=40;AF=0.769;AN=52;BaseQRankSum=1.901;DP=496;FS=1.740;HRun=1;HaplotypeScore=94.5351;InbreedingCoeff=0.1601;MQ=30.02;MQ0=47;MQRankSum=-3.468;QD=5.16;ReadPosRankSum=-2.726;VQSLOD=-0.6010;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:26,3:21:2.90:160,0,3	1/1:7,0:6:12.82:65,13,0	./.	./.	1/1:14,2:14:26.34:151,26,0	1/1:11,1:11:15.97:96,16,0	1/1:14,1:9:17.68:116,18,0	0/0:30,0:22:47.78:0,48,492	0/1:15,2:15:4.33:4,0,159	1/1:32,0:30:24.33:169,24,0	1/1:22,1:21:32.72:188,33,0	0/1:17,1:14:54.36:58,0,54	1/1:10,1:8:10.60:53,11,0	0/1:23,0:22:21.31:21,0,168	0/1:5,9:13:29.01:29,0,30	1/1:14,2:15:30.45:174,30,0	0/0:39,0:32:50.97:0,51,501	0/1:12,0:5:20.22:20,0,28	1/1:15,3:12:18.57:174,19,0	1/1:13,1:11:12.60:54,13,0	1/1:10,1:10:19.89:112,20,0	1/1:20,2:20:19.06:123,19,0	1/1:29,2:27:7.22:148,7,0	0/1:22,0:16:20.75:21,0,65	1/1:23,3:23:2.79:132,3,0	0/1:13,3:12:22.55:133,0,23	1/1:16,1:16:21.66:146,22,0	1/1:3,0:2:0.47:1,0,0
chr10	25726576	.	AAG	A	339.03	PASS	AB=0.978;AC=19;AF=0.365;AN=52;BaseQRankSum=1.788;DP=491;FS=0.000;HRun=0;HaplotypeScore=106.0503;InbreedingCoeff=-0.3785;MQ=30.55;MQ0=44;MQRankSum=-2.367;QD=1.03;ReadPosRankSum=-2.610;VQSLOD=0.9467;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:20:42.10:42,0,51	1/1:7,0:6:8.10:34,8,0	./.	./.	0/1:15,0:13:24.51:34,0,25	0/1:10,1:10:39.04:39,0,47	0/1:15,0:9:3.74:4,0,36	0/0:31,0:23:62.57:0,63,784	0/0:16,1:15:17.91:0,18,287	0/1:32,0:29:27.69:28,0,63	0/1:22,0:20:16.65:17,0,96	0/0:17,0:14:1.05:0,1,117	0/0:11,0:8:0.91:0,1,23	0/1:26,0:25:3.64:4,0,309	0/0:16,0:15:2.44:0,2,66	0/1:15,1:15:19.39:57,0,19	0/0:39,0:33:51.14:0,51,740	0/0:12,0:5:5.61:0,6,62	0/1:18,0:12:34.48:79,0,34	0/1:13,1:11:14.83:22,0,15	0/1:11,0:10:6.44:6,0,52	0/1:21,0:19:12.13:24,0,12	0/1:28,1:26:5.62:6,0,132	0/1:21,0:16:12.27:12,0,130	0/1:23,2:22:16.95:17,0,213	0/0:16,0:12:16.17:0,16,156	0/1:16,1:16:25.33:56,0,25	0/1:3,0:2:0:0,0,0
chr10	25726607	.	AAAGAAAGAAAGGAAGGAAGGAAGG	A	11483.79	PASS	AB=1.000;AC=33;AF=0.589;AN=56;BaseQRankSum=-5.730;DP=440;FS=7.615;HRun=0;HaplotypeScore=233.2229;InbreedingCoeff=-0.3128;MQ=39.97;MQ0=30;MQRankSum=0.663;QD=30.38;ReadPosRankSum=-3.136;VQSLOD=1.9984;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:21,0:21:99:500,0,1055	1/1:4,0:4:9.03:249,9,0	0/1:10,0:3:34.55:35,0,175	0/0:8,0:4:8.86:0,9,392	0/1:19,0:18:38:564,0,38	0/1:13,0:12:19.12:639,0,19	0/1:15,0:10:29.10:568,0,29	0/0:21,0:14:27:0,27,373	0/1:16,0:14:46.40:714,0,46	1/1:4,23:25:30.91:1609,31,0	0/1:16,0:16:99:602,0,103	0/1:11,0:8:74.06:74,0,79	0/1:9,0:8:48.49:93,0,48	0/1:22,0:22:17.26:17,0,105	0/1:13,0:13:99:150,0,569	0/1:8,0:8:32.14:251,0,32	0/0:33,0:28:54.19:0,54,3322	1/1:6,0:2:2.99:38,3,0	1/1:18,0:12:20.71:521,21,0	1/1:14,0:13:5.28:653,5,0	0/1:16,0:15:97.74:415,0,98	1/1:20,0:20:13.52:270,14,0	0/1:19,0:16:99:338,0,258	0/1:16,0:14:74.92:281,0,75	0/1:31,0:27:99:1126,0,363	0/1:21,0:18:99:975,0,143	1/1:10,0:10:14.20:546,14,0	1/1:3,0:3:9.03:256,9,0
chr10	25726611	.	AAAGAAAGGAAGGAAGGAAGG	A	14820.65	PASS	AB=1.000;AC=45;AF=0.804;AN=56;BaseQRankSum=-4.294;DP=444;FS=4.360;HRun=0;HaplotypeScore=205.9077;InbreedingCoeff=0.3461;MQ=40.85;MQ0=23;MQRankSum=-3.086;QD=39.52;ReadPosRankSum=-2.088;VQSLOD=3.6920;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:21,0:21:99:737,0,676	1/1:3,0:3:9.03:278,9,0	0/1:10,0:3:34.55:35,0,175	0/0:12,0:5:11.54:0,12,504	1/1:22,0:21:41.81:909,42,0	1/1:12,0:12:32.98:746,33,0	1/1:16,0:11:30.03:698,30,0	0/0:20,0:13:25.22:0,25,374	1/1:15,0:14:32.98:858,33,0	1/1:26,0:25:56.55:1627,57,0	1/1:15,1:16:35.54:737,36,0	1/1:9,0:6:14.78:234,15,0	1/1:9,0:9:15.04:323,15,0	1/1:21,0:21:5.95:106,6,0	0/1:12,0:12:99:228,0,244	1/1:7,0:7:14.72:344,15,0	0/0:37,0:32:66.17:0,66,2786	1/1:6,0:2:3.01:38,3,0	1/1:16,0:11:30.02:593,30,0	1/1:14,0:13:29.52:671,30,0	1/1:15,0:14:4.62:392,5,0	1/1:4,16:20:18.44:339,18,0	1/1:20,0:17:20.92:634,21,0	0/1:17,0:15:24.41:403,0,24	1/1:33,0:29:79.88:1691,80,0	0/1:21,0:20:17.01:1123,0,17	1/1:11,0:11:28.88:820,29,0	1/1:3,0:3:9.03:256,9,0
chr10	25726615	.	AAAGGAAGGAAGGAAGG	A	15907.48	PASS	AB=1.000;AC=46;AF=0.821;AN=56;BaseQRankSum=-3.483;DP=450;FS=2.479;HRun=0;HaplotypeScore=186.5755;InbreedingCoeff=0.3936;MQ=43.25;MQ0=18;MQRankSum=-3.545;QD=41.97;ReadPosRankSum=1.537;VQSLOD=3.9952;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:21,0:21:99:882,0,355	1/1:6,0:6:18.06:479,18,0	0/1:13,0:6:25.52:26,0,292	0/0:14,0:6:13.53:0,14,576	1/1:21,0:21:35.10:851,35,0	1/1:12,1:13:32.25:693,32,0	1/1:14,0:11:25.75:605,26,0	0/0:19,0:13:15.62:0,16,469	1/1:15,1:15:31.01:875,31,0	1/1:25,0:24:44.99:1473,45,0	1/1:17,0:17:3.33:702,3,0	1/1:9,0:7:10.33:261,10,0	1/1:10,0:10:18.06:470,18,0	1/1:3,17:20:1.96:107,2,0	0/1:11,0:11:99:442,0,99	1/1:7,1:8:13.72:371,14,0	0/0:38,0:33:52.45:0,52,2217	1/1:7,0:4:9.03:231,9,0	1/1:15,0:11:29.74:544,30,0	1/1:13,1:13:28.61:698,29,0	1/1:16,0:15:5.08:399,5,0	1/1:18,0:18:7.66:292,8,0	1/1:19,1:17:36.11:807,36,0	1/1:15,0:13:9.23:482,9,0	1/1:32,0:28:75.68:1845,76,0	0/1:23,0:22:7.27:1156,0,7	1/1:11,1:12:34.42:962,34,0	1/1:3,0:3:9.03:256,9,0
chr10	25728117	.	CACAT	C	2000.45	PASS	AB=0.967;AC=17;AF=0.304;AN=56;BaseQRankSum=-0.705;DP=1014;FS=0.000;HRun=0;HaplotypeScore=282.1108;InbreedingCoeff=0.1290;MQ=48.42;MQ0=28;MQRankSum=-2.143;QD=4.71;ReadPosRankSum=-3.843;VQSLOD=1.3779;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:22,22:44:48.04:859,48,0	0/1:11,1:12:6.59:47,0,7	0/0:46,0:17:51.16:0,51,1069	0/0:44,0:20:41.30:0,41,886	0/0:33,0:33:28.49:0,28,73	0/0:20,0:19:9.38:0,9,28	0/0:31,0:31:9.16:0,9,75	0/0:51,0:51:99:0,144,2567	0/0:50,0:47:26.34:0,26,67	0/1:42,1:40:12.61:256,0,13	0/0:21,1:22:14.39:0,14,38	0/0:41,0:40:9.53:0,10,43	0/1:40,0:39:5.63:6,0,30	0/0:58,0:55:34.13:0,34,111	1/1:21,27:48:36.11:620,36,0	0/1:44,0:40:18.98:19,0,103	0/0:49,0:49:99:0,127,3106	0/1:25,1:26:33.77:36,0,34	1/1:10,0:10:7.16:78,7,0	0/0:23,0:22:15.77:0,16,40	0/0:84,0:81:5.50:0,5,77	0/1:37,0:37:19.01:19,0,51	0/1:24,1:25:23.02:36,0,23	0/0:37,0:37:19.21:0,19,74	0/1:21,1:22:32.53:33,0,35	0/1:31,1:31:45.37:92,0,45	0/1:29,1:29:3.71:4,0,47	0/1:11,1:12:0.45:65,0,0
chr10	25728119	.	CAT	C	19528.62	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=12.313;DP=1028;FS=17.440;HRun=0;HaplotypeScore=196.7616;InbreedingCoeff=0.9925;MQ=48.20;MQ0=28;MQRankSum=3.696;QD=23.59;ReadPosRankSum=7.223;VQSLOD=3.9911;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:44,0:44:14.94:249,15,0	1/1:6,7:13:21.02:283,21,0	0/0:46,1:17:44.14:0,44,759	0/0:46,0:20:34.46:0,34,701	1/1:6,26:32:69.23:1050,69,0	1/1:2,17:18:33.58:504,34,0	1/1:12,19:31:78.20:1103,78,0	0/0:55,0:55:99:0,148,2192	1/1:17,34:48:66.08:979,66,0	1/1:16,27:40:99:1426,114,0	1/1:7,17:24:36.12:535,36,0	1/1:13,27:39:60.12:887,60,0	1/1:11,29:39:66.05:932,66,0	1/1:22,35:54:78.23:1145,78,0	1/1:48,0:48:34.71:214,35,0	1/1:17,27:40:53.75:1069,54,0	0/0:50,1:51:99:0,123,2422	1/1:5,22:27:58.38:838,58,0	1/1:6,5:10:26.65:286,27,0	1/1:8,17:24:45.15:686,45,0	1/1:24,60:81:99:1816,113,0	1/1:11,26:37:81.22:1190,81,0	1/1:6,19:25:48.11:705,48,0	1/1:11,26:37:36.08:500,36,0	1/1:8,14:22:47.90:673,48,0	1/1:9,23:31:87.04:1166,87,0	1/1:7,23:29:63.79:1065,64,0	1/1:8,4:12:20.44:227,20,0
chr10	25728161	.	CACACAT	C	2942.09	PASS	AB=0.770;AC=10;AF=0.179;AN=56;BaseQRankSum=6.372;DP=1067;FS=1.673;HRun=0;HaplotypeScore=302.8479;InbreedingCoeff=-0.2151;MQ=40.22;MQ0=26;MQRankSum=-9.177;QD=8.73;ReadPosRankSum=3.988;VQSLOD=1.9258;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:37.10:0,37,394	0/0:12,3:15:16.86:0,17,205	0/0:47,0:16:45.15:0,45,759	0/0:45,0:20:57.11:0,57,1312	0/0:11,7:18:21.02:0,21,280	0/1:16,7:23:4.21:4,0,231	0/0:22,5:27:27.54:0,28,385	0/0:72,0:68:99:0,166,3789	0/1:31,27:57:99:170,0,316	0/1:29,17:45:99:929,0,709	0/0:18,6:24:15.03:0,15,175	0/0:32,13:45:37.97:0,38,477	0/1:24,21:45:99:499,0,298	0/0:44,19:63:37.02:0,37,489	0/0:53,0:53:20.68:0,21,266	0/1:27,17:43:32.20:32,0,347	0/0:50,0:50:99:0,125,3397	0/1:20,0:20:27.40:27,0,385	0/1:19,8:22:99:513,0,366	0/0:23,15:36:15:0,15,212	0/0:61,5:62:56.66:0,57,753	0/0:27,14:41:31.73:0,32,372	0/0:21,6:25:14.72:0,15,146	0/0:28,5:33:17.61:0,18,206	0/0:11,15:26:13.82:0,14,156	0/1:22,5:26:99:283,0,626	0/1:27,10:37:99:526,0,286	0/1:6,4:10:99:100,0,229
chr10	25728163	.	CACAT	C	4102.40	PASS	AB=0.988;AC=44;AF=0.786;AN=56;BaseQRankSum=11.126;DP=1053;FS=1.617;HRun=0;HaplotypeScore=277.9588;InbreedingCoeff=0.4753;MQ=39.85;MQ0=24;MQRankSum=-1.182;QD=4.89;ReadPosRankSum=4.310;VQSLOD=2.0172;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:38,2:40:2.95:78,0,3	1/1:15,0:15:10.23:83,10,0	0/0:45,0:16:14.77:0,15,129	0/0:47,0:21:35.81:0,36,508	1/1:18,0:18:6:56,6,0	0/1:23,0:23:0.79:40,0,1	1/1:25,0:25:1.92:64,2,0	0/0:75,0:71:88.32:0,88,1450	1/1:58,0:57:20.51:192,21,0	1/1:45,0:44:95.26:801,95,0	1/1:23,1:24:8.83:73,9,0	1/1:42,1:43:13.92:122,14,0	1/1:44,0:44:35.13:313,35,0	1/1:62,0:62:11.65:120,12,0	1/1:56,0:56:6.37:82,6,0	1/1:44,0:43:26.45:262,26,0	0/0:46,1:47:30.10:0,30,1898	1/1:18,0:18:26.84:244,27,0	1/1:27,0:22:32.99:304,33,0	1/1:37,0:35:2.88:15,3,0	0/1:62,0:58:11.51:138,0,12	1/1:40,0:40:11.98:126,12,0	1/1:26,0:24:5.82:50,6,0	1/1:34,0:34:2.99:24,3,0	1/1:26,0:26:8.95:90,9,0	1/1:26,0:25:16.42:374,16,0	0/1:36,0:36:8.02:370,0,8	1/1:10,0:10:8.89:83,9,0
chr10	25728177	.	CAT	C	107.37	PASS	AB=0.934;AC=4;AF=0.071;AN=56;BaseQRankSum=10.018;DP=1057;FS=22.858;HRun=0;HaplotypeScore=306.3655;InbreedingCoeff=-0.1010;MQ=38.32;MQ0=19;MQRankSum=-1.879;QD=0.68;ReadPosRankSum=4.176;VQSLOD=1.0902;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,7:35:10.86:0,11,87	0/0:14,0:14:13.39:0,13,85	0/0:51,0:20:52.92:0,53,726	0/0:55,0:22:57.96:0,58,940	0/0:20,0:20:20.49:0,20,138	0/0:24,0:24:23.67:0,24,182	0/0:29,0:29:14.56:0,15,199	0/0:55,1:52:95.93:0,96,2347	0/0:61,0:60:7.13:0,7,106	0/1:44,0:43:44.30:44,0,332	0/0:23,0:23:14.74:0,15,94	0/0:46,0:46:2.95:0,3,228	0/0:43,0:43:17.48:0,17,152	0/0:62,0:62:14.54:0,15,128	0/1:36,20:56:3.13:3,0,56	0/0:46,0:45:17.28:0,17,153	0/0:42,0:42:97.54:0,98,1890	0/0:16,0:16:21.56:0,22,189	0/1:24,0:20:40.65:41,0,172	0/0:38,0:36:11.80:0,12,79	0/0:63,0:58:38.55:0,39,350	0/0:43,0:43:18.04:0,18,176	0/0:30,0:28:6.40:0,6,40	0/0:31,0:31:2.78:0,3,18	0/0:29,0:29:2.91:0,3,62	0/0:31,0:30:56.39:0,56,482	0/1:35,0:35:36.38:120,0,36	0/0:9,0:9:1.88:0,2,13
chr10	25728188	.	A	ATG	180.78	PASS	AB=0.980;AC=15;AF=0.268;AN=56;BaseQRankSum=4.191;DP=961;FS=2.757;HRun=0;HaplotypeScore=289.9576;InbreedingCoeff=-0.1525;MQ=37.82;MQ0=12;MQRankSum=-2.432;QD=0.43;ReadPosRankSum=-1.751;VQSLOD=2.3122;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:22,5:27:1.87:2,0,42	0/1:10,0:10:9.79:10,0,43	0/0:46,0:19:37:0,37,687	0/0:61,0:24:55.80:0,56,831	0/0:22,0:22:26.97:0,27,381	0/0:20,0:20:11.94:0,12,195	0/1:30,0:30:19.33:19,0,311	0/0:47,0:46:99:0,117,1920	0/0:53,2:54:3.77:0,4,296	0/1:44,0:43:51.34:51,0,1143	0/0:24,0:24:15.05:0,15,241	0/1:42,0:42:3.35:3,0,465	0/0:41,0:41:17.96:0,18,431	0/0:58,0:58:7.86:0,8,364	1/1:34,17:52:0.69:61,1,0	0/1:39,0:38:62.27:62,0,289	0/0:34,0:34:91.86:0,92,1462	0/1:14,0:14:45.34:45,0,256	0/1:17,0:15:2.98:3,0,511	0/0:40,0:38:14.99:0,15,236	0/1:52,2:49:35.82:36,0,494	0/0:40,0:40:5.09:0,5,321	0/0:25,0:24:14.92:0,15,242	0/1:27,2:29:0.11:0,0,0	0/1:26,0:26:7.40:7,0,179	0/1:25,0:23:13.09:13,0,648	0/0:31,0:31:46.36:0,46,616	0/1:8,0:8:1.61:2,0,223
chr10	25728197	.	TACATAC	T	243.21	PASS	AB=0.922;AC=3;AF=0.054;AN=56;BaseQRankSum=7.178;DP=995;FS=2.330;HRun=0;HaplotypeScore=333.0085;InbreedingCoeff=0.0514;MQ=39.10;MQ0=15;MQRankSum=-6.967;QD=2.04;ReadPosRankSum=0.615;VQSLOD=1.9038;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:27:3.81:12,0,4	0/0:10,0:10:6.02:0,6,152	0/0:46,0:21:51.64:0,52,1364	0/0:49,0:19:44.12:0,44,1185	0/0:22,0:22:30.10:0,30,898	0/0:21,0:21:17.91:0,18,414	0/0:30,0:30:9.29:0,9,909	0/0:49,0:48:49.10:0,49,2706	0/0:57,0:56:4.61:0,5,639	0/0:48,0:47:9.14:0,9,2166	0/0:25,0:25:21.07:0,21,651	0/0:42,0:42:35.87:0,36,1232	0/0:42,0:42:26.48:0,26,741	0/0:57,0:57:29.11:0,29,823	0/1:53,0:53:12.78:13,0,13	0/0:42,0:41:11.91:0,12,900	0/0:35,0:35:94.73:0,95,2794	0/0:14,0:14:0.58:0,1,589	0/0:19,0:15:23.20:0,23,821	0/0:41,0:39:24.08:0,24,706	0/0:62,0:58:50.88:0,51,1384	0/0:43,0:43:32.83:0,33,916	0/0:26,0:25:20.79:0,21,593	0/0:28,0:28:2.60:0,3,76	0/0:26,0:26:14.81:0,15,400	0/0:31,0:29:18:0,18,1625	0/1:27,12:39:99:312,0,1295	0/0:10,0:10:21.02:0,21,471
chr10	25728201	.	TAC	T	356.40	PASS	AB=0.913;AC=8;AF=0.143;AN=56;BaseQRankSum=5.897;DP=1008;FS=2.317;HRun=0;HaplotypeScore=304.6244;InbreedingCoeff=0.2028;MQ=39.86;MQ0=18;MQRankSum=-7.469;QD=1.71;ReadPosRankSum=0.630;VQSLOD=2.0200;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:17,11:28:6.20:75,6,0	0/0:6,3:9:6.02:0,6,97	0/0:46,0:18:48.55:0,49,762	0/0:52,0:19:39.13:0,39,638	0/0:21,0:21:33.11:0,33,557	0/0:15,6:20:20.97:0,21,321	0/0:30,1:31:13.22:0,13,580	0/0:49,0:48:77.24:0,77,1679	0/0:49,7:55:19.12:0,19,496	0/1:39,9:47:99:232,0,1470	0/0:21,4:25:24.08:0,24,401	0/0:33,8:41:2.10:0,2,629	0/0:38,6:44:7.99:0,8,629	0/0:40,15:55:32.79:0,33,508	1/1:44,8:52:1.49:8,1,0	0/0:38,6:43:15.53:0,16,619	0/0:34,0:34:86.32:0,86,1436	0/1:11,1:12:41.35:41,0,349	0/0:20,1:17:8.16:0,8,644	0/0:30,11:39:24.08:0,24,409	0/0:64,3:63:60.80:0,61,956	0/0:34,10:44:39.13:0,39,645	0/0:19,7:26:23.91:0,24,401	0/0:24,5:29:8.83:0,9,115	0/0:23,4:27:17.94:0,18,296	0/1:27,4:29:87.37:87,0,943	0/1:38,0:38:39.69:40,0,957	0/0:12,1:13:30.09:0,30,468
chr10	25728203	.	C	CAT	275.60	PASS	AB=0.979;AC=10;AF=0.179;AN=56;BaseQRankSum=6.965;DP=1008;FS=1.424;HRun=0;HaplotypeScore=307.4248;InbreedingCoeff=-0.0243;MQ=40.09;MQ0=19;MQRankSum=-7.136;QD=0.84;ReadPosRankSum=-0.329;VQSLOD=2.1275;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:28,1:29:2.37:51,2,0	0/0:10,0:10:9.02:0,9,116	0/0:49,0:19:48.60:0,49,684	0/0:52,0:18:45.12:0,45,628	0/0:22,0:22:33.11:0,33,502	0/0:21,0:20:20.91:0,21,290	0/0:29,1:30:28.08:0,28,534	0/0:50,0:49:82.36:0,82,1570	0/1:54,2:55:6.67:7,0,447	0/1:46,0:45:99:115,0,1346	0/0:23,0:23:23.92:0,24,363	0/0:41,0:41:18.52:0,19,581	0/0:42,1:43:27.76:0,28,629	0/0:57,0:57:35.72:0,36,484	0/1:45,0:48:1.16:1,0,18	0/1:45,0:44:6.37:6,0,566	0/0:33,0:33:89.04:0,89,1324	0/1:11,1:12:99:111,0,322	0/1:22,0:18:12.64:13,0,625	0/0:41,0:39:24.01:0,24,365	0/0:60,8:63:60.93:0,61,863	0/0:45,0:45:39.13:0,39,590	0/0:26,0:26:23.95:0,24,365	0/0:26,3:29:8.83:0,9,109	0/0:28,0:28:21.06:0,21,297	0/1:31,0:29:33.17:33,0,888	0/1:38,0:38:71.15:71,0,875	0/0:13,0:13:30.06:0,30,427
chr10	25728241	.	TAC	T	17461.10	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=11.062;DP=876;FS=0.000;HRun=0;HaplotypeScore=221.1521;InbreedingCoeff=0.9957;MQ=54.89;MQ0=2;MQRankSum=-3.149;QD=23.95;ReadPosRankSum=7.733;VQSLOD=5.0285;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,32:37:50.99:663,51,0	1/1:1,12:13:30.10:390,30,0	0/0:19,0:12:20.39:0,20,202	0/0:30,0:16:29.14:0,29,447	1/1:3,23:26:60.20:780,60,0	1/1:2,25:27:48.04:624,48,0	1/1:8,28:36:63:819,63,0	0/0:70,0:70:99:0,171,2748	1/1:10,31:40:62.83:777,63,0	1/1:8,30:38:87.19:1078,87,0	1/1:3,20:23:36.12:468,36,0	1/1:4,29:33:62.82:819,63,0	1/1:7,28:35:65.91:840,66,0	1/1:3,37:40:69.07:870,69,0	1/1:7,39:46:89.90:1124,90,0	1/1:7,29:36:72.13:914,72,0	0/0:28,0:28:75.26:0,75,1246	1/1:2,10:12:30.07:390,30,0	1/1:4,17:21:51.15:637,51,0	1/1:7,21:28:44.83:566,45,0	1/1:17,41:58:84.06:1092,84,0	1/1:2,30:32:75.13:975,75,0	1/1:2,23:25:47.92:624,48,0	1/1:7,21:28:20.74:273,21,0	1/1:8,11:19:20.81:273,21,0	1/1:2,30:32:87.14:1060,87,0	1/1:6,24:30:69.22:897,69,0	1/1:0,13:13:39.13:507,39,0
chr10	25728349	.	A	ACTG	8179.47	PASS	AB=0.807;AC=33;AF=0.717;AN=46;BaseQRankSum=1.152;DP=629;FS=11.327;HRun=0;HaplotypeScore=109.2978;InbreedingCoeff=0.4173;MQ=74.41;MQ0=3;MQRankSum=-1.121;QD=18.55;ReadPosRankSum=0.315;VQSLOD=3.9034;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:22,2:24:3.01:58,3,0	1/1:5,2:7:3.01:58,3,0	0/0:39,0:31:8.97:0,9,84	0/0:28,0:26:12.03:0,12,147	0/1:11,0:11:0:0,0,0	1/1:18,0:18:3.01:58,3,0	1/1:10,17:27:33.11:641,33,0	0/0:25,0:25:3:0,3,27	1/1:19,19:38:34.47:1311,34,0	./.	./.	1/1:11,18:30:48.16:929,48,0	1/1:16,22:40:19.82:1055,20,0	1/1:20,10:31:24.08:466,24,0	1/1:20,22:42:54.19:1047,54,0	0/1:11,14:27:38.39:642,0,38	0/0:27,0:28:51.11:0,51,648	1/1:5,3:8:12.01:197,12,0	0/1:19,0:19:0:0,0,0	1/1:6,0:6:3.01:49,3,0	1/1:27,5:32:12.04:233,12,0	./.	./.	0/1:13,13:26:4.14:604,0,4	./.	1/1:18,1:19:3.48:59,3,0	1/1:12,14:26:29.97:561,30,0	0/1:6,3:9:25.21:211,0,25
chr10	25728690	.	G	GACTCTTTTGGCTGTA	74130.69	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-2.875;DP=533;FS=14.242;HRun=0;HaplotypeScore=175.8122;InbreedingCoeff=0.9467;MQ=84.99;MQ0=0;MQRankSum=-14.769;QD=170.42;ReadPosRankSum=7.256;VQSLOD=4.1347;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,17:30:81.28:5572,81,0	1/1:3,2:5:15.05:766,15,0	0/0:23,0:23:63.02:0,63,2243	0/0:27,0:26:75.26:0,75,2663	1/1:3,5:8:21.07:1390,21,0	1/1:9,6:18:45.15:3077,45,0	1/1:20,10:32:84.25:4782,84,0	0/0:28,0:28:84.27:0,84,3254	1/1:10,15:27:75.26:5209,75,0	1/1:10,6:19:57.20:3302,57,0	1/1:4,3:7:21.07:1400,21,0	1/1:11,10:24:66.23:4706,66,0	1/1:11,16:29:69.19:4792,69,0	1/1:12,13:28:75.26:5049,75,0	1/1:16,12:31:87.30:5931,87,0	1/1:14,18:34:96.33:6177,96,0	0/0:20,0:20:60.19:0,60,2341	1/1:5,3:11:18.06:1234,18,0	1/1:10,5:15:39.13:2523,39,0	1/1:3,5:8:24.08:1437,24,0	1/1:11,2:16:33.11:1863,33,0	1/1:5,4:11:27.09:1752,27,0	1/1:1,2:3:9.03:607,9,0	1/1:10,6:21:30.10:2110,30,0	1/1:7,7:15:42.14:2820,42,0	1/1:14,7:24:69.22:3882,69,0	1/1:2,13:17:45.15:3300,45,0	1/1:1,1:2:6.02:449,6,0
chr10	25728940	.	GTA	G	59.42	PASS	AB=1.000;AC=6;AF=0.75;AN=8;DP=31;FS=0.000;HRun=0;HaplotypeScore=31.9782;MQ=57.38;MQ0=3;QD=2.70;VQSLOD=1.1402;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:2,0:2:0:0,0,0	./.	./.	0/1:9,0:3:0.20:0,0,0	./.	./.	./.	1/1:1,3:4:8.98:87,9,0	./.	./.	./.	./.	./.	./.	./.	./.	1/1:5,2:7:3.01:36,3,0	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.
chr10	25732489	.	T	TATC	26404.06	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=11.322;DP=550;FS=0.451;HRun=0;HaplotypeScore=135.8667;InbreedingCoeff=0.9810;MQ=70.70;MQ0=0;MQRankSum=-7.403;QD=57.78;ReadPosRankSum=6.375;VQSLOD=6.5269;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,22:26:63.22:1422,63,0	1/1:1,10:13:33.11:715,33,0	0/0:24,0:22:60.16:0,60,991	0/0:16,0:13:32.70:0,33,524	1/1:4,34:40:99:2113,99,0	1/1:4,24:28:78.27:1713,78,0	1/1:5,8:13:30.07:568,30,0	0/0:31,0:31:87.28:0,87,1500	1/1:0,18:19:54.19:1237,54,0	1/1:4,12:18:51.15:1049,51,0	1/1:1,15:16:48.16:1019,48,0	1/1:0,10:10:27.09:617,27,0	1/1:1,18:21:54.18:1185,54,0	1/1:2,14:16:39.13:863,39,0	1/1:2,15:17:42.14:955,42,0	1/1:2,13:15:36.12:822,36,0	0/0:22,0:22:66.23:0,66,1164	1/1:3,11:15:36.12:782,36,0	1/1:4,15:17:51.16:1040,51,0	1/1:2,21:23:66.21:1476,66,0	1/1:0,4:5:9.03:207,9,0	1/1:4,8:12:30.10:624,30,0	1/1:1,21:22:60.21:1354,60,0	1/1:1,7:8:18.06:391,18,0	1/1:0,26:27:78.27:1782,78,0	1/1:0,23:24:72.25:1655,72,0	1/1:5,23:30:81.28:1785,81,0	1/1:4,15:19:45.15:1031,45,0
chr10	25732842	.	GAA	G	14546.42	PASS	AB=0.692;AC=45;AF=0.804;AN=56;BaseQRankSum=12.501;DP=606;FS=1.595;HRun=7;HaplotypeScore=108.5910;InbreedingCoeff=0.4402;MQ=81.70;MQ0=0;MQRankSum=-4.138;QD=26.94;ReadPosRankSum=6.688;VQSLOD=3.7660;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,20:22:45.14:574,45,0	1/1:0,7:7:21.07:265,21,0	0/0:21,0:20:49.75:0,50,756	0/0:22,0:21:43.65:0,44,673	1/1:1,26:27:55.29:894,55,0	1/1:2,23:25:63.20:803,63,0	1/1:1,12:13:33.10:420,33,0	0/0:23,0:23:63.22:0,63,1092	1/1:1,25:26:72.23:915,72,0	1/1:3,18:21:54.15:661,54,0	1/1:0,15:15:45.14:570,45,0	1/1:2,17:19:36.12:459,36,0	1/1:1,20:21:60.19:761,60,0	1/1:1,14:15:39.12:497,39,0	1/1:2,18:20:54.17:686,54,0	1/1:2,13:15:39.12:497,39,0	0/1:19,2:21:13.31:13,0,895	1/1:2,11:13:30.09:382,30,0	0/1:20,17:37:99:525,0,848	0/1:12,27:39:99:809,0,518	0/1:9,15:24:99:437,0,305	1/1:1,12:13:33.10:421,33,0	1/1:2,16:18:42.13:535,42,0	1/1:1,14:15:39.12:497,39,0	1/1:0,12:12:30.10:382,30,0	1/1:0,24:24:72.23:918,72,0	0/1:29,32:61:99:975,0,1229	1/1:0,17:17:51.16:650,51,0
chr10	25734083	.	CA	C	18818.07	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=9.362;DP=635;FS=9.514;HRun=2;HaplotypeScore=107.4757;InbreedingCoeff=0.9890;MQ=90.96;MQ0=0;MQRankSum=-7.240;QD=35.24;ReadPosRankSum=7.552;VQSLOD=3.4954;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,30:31:75.24:973,75,0	1/1:0,8:8:18.06:234,18,0	0/0:30,0:30:84.85:0,85,1159	0/0:19,0:19:45.12:0,45,639	1/1:1,33:34:87.24:1110,87,0	1/1:0,24:24:69.22:895,69,0	1/1:0,17:17:48.16:623,48,0	0/0:30,0:30:84.27:0,84,1225	1/1:0,24:24:72.23:934,72,0	1/1:1,32:33:90.26:1139,90,0	1/1:0,31:31:93.30:1205,93,0	1/1:1,20:21:54.18:701,54,0	1/1:1,20:21:60.19:777,60,0	1/1:2,12:14:35.79:439,36,0	1/1:0,19:19:48.16:622,48,0	1/1:2,24:26:72.23:935,72,0	0/0:22,0:22:66.21:0,66,967	1/1:0,10:10:30.10:388,30,0	1/1:1,19:20:57:699,57,0	1/1:0,29:29:84.27:1089,84,0	1/1:1,31:32:81.26:1052,81,0	1/1:0,23:23:63.20:818,63,0	1/1:0,17:17:45.15:584,45,0	1/1:1,23:24:66.21:857,66,0	1/1:0,12:12:33.11:428,33,0	1/1:1,24:25:72.19:915,72,0	1/1:0,34:34:96.31:1246,96,0	1/1:0,5:5:12.04:156,12,0
chr10	25735270	.	G	GGAA	34417.09	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-9.614;DP=697;FS=0.425;HRun=0;HaplotypeScore=96.9387;InbreedingCoeff=0.9911;MQ=80.63;MQ0=1;MQRankSum=-8.743;QD=57.27;ReadPosRankSum=4.789;VQSLOD=6.9596;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,43:47:99:2485,117,0	1/1:1,17:18:54.14:1208,54,0	0/0:11,0:11:33.11:0,33,546	0/0:32,0:30:66.81:0,67,1042	1/1:4,23:28:77.88:1317,78,0	1/1:1,21:21:57.20:1331,57,0	1/1:4,21:25:66.14:1440,66,0	0/0:26,0:26:78.26:0,78,1349	1/1:7,21:29:69.19:1515,69,0	1/1:2,29:31:90.29:1995,90,0	1/1:0,11:11:27.43:486,27,0	1/1:5,27:34:87.21:1941,87,0	1/1:0,19:19:54.19:1277,54,0	1/1:7,30:39:96.33:2161,96,0	1/1:1,25:27:71.98:1600,72,0	1/1:2,28:29:81.28:1883,81,0	0/0:26,0:26:75.18:0,75,1207	1/1:0,19:18:51.18:1206,51,0	1/1:10,12:26:69.24:1583,69,0	1/1:1,17:18:51.06:1022,51,0	1/1:7,38:46:99:2144,104,0	1/1:2,23:27:69.13:1500,69,0	1/1:2,10:12:33.07:730,33,0	1/1:2,20:24:51.97:1106,52,0	1/1:2,16:18:51.09:1104,51,0	1/1:4,22:27:81.26:1817,81,0	1/1:0,19:19:57.15:1297,57,0	1/1:1,3:4:12.04:269,12,0
chr10	25736275	.	G	GCAACAGAAC	49251.97	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-3.886;DP=568;FS=11.379;HRun=0;HaplotypeScore=162.5606;InbreedingCoeff=0.9591;MQ=72.69;MQ0=0;MQRankSum=-15.078;QD=108.01;ReadPosRankSum=3.136;VQSLOD=5.2326;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,18:30:69.24:2862,69,0	1/1:4,5:11:24.08:1103,24,0	0/0:16,0:16:43.02:0,43,1115	0/0:38,0:38:60.53:0,61,2446	1/1:7,5:14:23.82:721,24,0	1/1:4,11:15:45.15:1958,45,0	1/1:7,11:21:54.19:2439,54,0	0/0:24,0:24:72.24:0,72,1977	1/1:4,13:17:48.16:2249,48,0	1/1:7,23:30:83.92:3885,84,0	1/1:2,3:6:12.04:322,12,0	1/1:5,17:24:66.23:3011,66,0	1/1:8,19:30:84.29:3855,84,0	1/1:12,19:32:93.32:4234,93,0	1/1:9,11:22:51.17:2240,51,0	1/1:6,20:28:78.27:3574,78,0	0/0:34,0:34:62.53:0,63,2860	1/1:9,10:23:44.52:1928,45,0	1/1:4,7:11:33.11:1345,33,0	1/1:2,5:7:18.06:806,18,0	1/1:13,4:20:23.34:757,23,0	1/1:5,16:21:57.19:2449,57,0	1/1:4,6:12:30.10:1220,30,0	1/1:6,16:23:47.79:2109,48,0	1/1:3,9:12:33.07:1281,33,0	1/1:10,6:16:45.15:1845,45,0	1/1:9,13:23:66.23:2765,66,0	1/1:0,2:3:6.02:294,6,0
chr10	25742335	.	G	GCACCTCACATAA	67520.78	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-4.774;DP=683;FS=6.450;HRun=0;HaplotypeScore=198.5871;InbreedingCoeff=0.9722;MQ=75.50;MQ0=0;MQRankSum=-13.194;QD=113.86;ReadPosRankSum=3.990;VQSLOD=4.6354;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:14,18:39:64.57:3609,65,0	1/1:3,5:8:18.06:1060,18,0	0/0:23,0:23:60.12:0,60,1686	0/0:21,0:21:59.90:0,60,1582	1/1:9,21:33:71.96:3542,72,0	1/1:7,14:30:51.18:2987,51,0	1/1:9,6:16:39.01:1735,39,0	0/0:20,0:20:51.17:0,51,1673	1/1:10,21:32:84.20:4519,84,0	1/1:6,20:30:84.24:4380,84,0	1/1:12,20:41:84.12:4241,84,0	1/1:8,13:24:51.14:2655,51,0	1/1:6,12:21:48.13:2683,48,0	1/1:3,12:20:39.13:2290,39,0	1/1:9,13:27:51.09:2703,51,0	1/1:4,18:25:60.21:3608,60,0	0/0:26,0:26:70.12:0,70,2523	1/1:2,4:7:12.04:734,12,0	1/1:11,4:24:69.19:2725,69,0	1/1:12,14:33:78.11:3941,78,0	1/1:6,3:15:8.99:386,9,0	1/1:2,10:19:44.90:2148,45,0	1/1:3,23:30:66.53:3673,67,0	1/1:6,10:20:39.09:1863,39,0	1/1:13,11:27:63.09:2999,63,0	1/1:10,13:31:84.26:4160,84,0	1/1:11,16:32:69.05:3851,69,0	1/1:5,3:8:21.03:1029,21,0
chr10	25743441	.	T	TAAG	26216.83	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-10.227;DP=572;FS=3.369;HRun=0;HaplotypeScore=68.0314;InbreedingCoeff=0.9953;MQ=85.71;MQ0=0;MQRankSum=-7.272;QD=54.39;ReadPosRankSum=6.291;VQSLOD=7.0988;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,30:32:75.26:1727,75,0	1/1:0,8:8:18.06:415,18,0	0/0:22,0:22:47.34:0,47,795	0/0:18,0:18:33.71:0,34,632	1/1:0,34:34:96.17:2015,96,0	1/1:0,15:15:33.11:760,33,0	1/1:0,9:9:24.08:552,24,0	0/0:31,0:31:84.26:0,84,1349	1/1:0,12:12:27.09:622,27,0	1/1:0,28:28:84.26:1789,84,0	1/1:0,22:23:54.19:1238,54,0	1/1:0,13:13:24.08:519,24,0	1/1:0,23:24:60.20:1347,60,0	1/1:1,22:23:51.18:1173,51,0	1/1:0,17:19:33.11:759,33,0	1/1:0,20:20:51.18:1174,51,0	0/0:19,0:19:57.17:0,57,939	1/1:1,16:17:45.09:948,45,0	1/1:0,18:18:54.17:1196,54,0	1/1:3,26:29:75.05:1520,75,0	1/1:0,14:14:27.09:622,27,0	1/1:0,14:15:30.02:639,30,0	1/1:1,10:13:30.10:690,30,0	1/1:0,11:11:27.09:618,27,0	1/1:2,23:25:66.23:1485,66,0	1/1:0,21:23:69.20:1381,69,0	1/1:2,37:40:90.31:2062,90,0	1/1:2,14:16:42.14:967,42,0
chr10	25745315	.	G	GTC	27336.95	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-3.703;DP=651;FS=6.868;HRun=0;HaplotypeScore=84.3645;InbreedingCoeff=0.9988;MQ=89.38;MQ0=1;MQRankSum=-7.325;QD=49.17;ReadPosRankSum=7.934;VQSLOD=5.4999;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,18:20:51.17:934,51,0	1/1:0,11:11:33.11:605,33,0	0/0:26,0:26:72.20:0,72,991	0/0:25,0:25:66.13:0,66,869	1/1:0,34:34:99:1817,102,0	1/1:0,28:28:72.25:1320,72,0	1/1:0,19:19:54.19:990,54,0	0/0:25,0:25:72.21:0,72,964	1/1:0,20:20:57.20:1045,57,0	1/1:1,29:30:84.29:1540,84,0	1/1:1,25:26:72.25:1319,72,0	1/1:2,26:28:72.25:1319,72,0	1/1:0,27:29:72.25:1298,72,0	1/1:3,24:27:69.24:1264,69,0	1/1:1,25:25:69.24:1265,69,0	1/1:1,26:28:75.26:1375,75,0	0/0:19,0:19:57.18:0,57,798	1/1:3,7:11:21.07:384,21,0	1/1:1,20:21:63.19:1088,63,0	1/1:0,27:27:78.20:1392,78,0	1/1:2,22:24:60.21:1100,60,0	1/1:1,21:23:57.20:1045,57,0	1/1:1,22:23:60.20:1080,60,0	1/1:0,14:14:42.14:770,42,0	1/1:0,21:23:60.21:1100,60,0	1/1:0,22:22:66.23:1200,66,0	1/1:2,24:26:66.23:1209,66,0	1/1:0,16:16:48.16:879,48,0
chr10	25745650	.	TG	T	8973.27	PASS	AB=1.000;AC=49;AF=0.875;AN=56;BaseQRankSum=9.605;DP=541;FS=3.677;HRun=2;HaplotypeScore=136.0769;InbreedingCoeff=0.9002;MQ=67.89;MQ0=2;MQRankSum=-5.593;QD=19.30;ReadPosRankSum=4.967;VQSLOD=5.1678;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,15:21:48.10:392,48,0	1/1:2,6:8:17.79:134,18,0	0/1:28,0:10:1.43:1,0,175	0/0:19,0:10:17.90:0,18,161	1/1:11,23:34:84.21:685,84,0	1/1:1,13:14:35.94:327,36,0	1/1:1,8:9:23.83:173,24,0	0/0:27,0:27:64.57:0,65,954	1/1:5,7:12:29.77:242,30,0	1/1:13,23:36:94.67:768,95,0	1/1:8,16:24:71.27:570,71,0	1/1:2,8:10:29.79:250,30,0	1/1:1,19:20:41.92:376,42,0	1/1:1,19:20:41.85:348,42,0	1/1:3,8:11:31.05:244,31,0	1/1:0,14:13:23.95:216,24,0	0/0:29,0:29:73.37:0,73,1119	1/1:1,6:7:20.78:166,21,0	1/1:11,8:19:47.14:374,47,0	1/1:6,22:27:79.13:665,79,0	1/1:1,9:10:26.21:202,26,0	1/1:6,12:18:36.40:335,36,0	1/1:4,14:17:47.68:394,48,0	1/1:0,10:10:20.93:184,21,0	1/1:11,12:22:48:438,48,0	1/1:12,16:27:77.25:633,77,0	1/1:15,15:30:54.25:507,54,0	1/1:0,12:12:36.06:349,36,0
chr10	25745651	.	G	GT	8570.05	PASS	AB=1.000;AC=49;AF=0.875;AN=56;BaseQRankSum=9.888;DP=532;FS=2.150;HRun=6;HaplotypeScore=137.7562;InbreedingCoeff=0.8631;MQ=68.04;MQ0=2;MQRankSum=-4.883;QD=18.71;ReadPosRankSum=6.178;VQSLOD=3.1677;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:21:43.89:340,44,0	1/1:6,0:6:17.59:136,18,0	0/1:30,0:11:6.16:6,0,227	0/0:20,0:10:20.32:0,20,210	1/1:31,2:33:78.46:658,78,0	1/1:13,0:13:35.98:316,36,0	1/1:8,0:8:23.49:148,23,0	0/0:25,0:25:71.73:0,72,932	1/1:10,2:12:29.81:247,30,0	1/1:35,1:36:75.14:723,75,0	1/1:24,1:25:61.29:516,61,0	1/1:10,0:10:29.94:262,30,0	1/1:19,0:19:41.85:345,42,0	1/1:19,0:19:41.71:322,42,0	1/1:11,0:11:29.97:265,30,0	1/1:14,0:13:23.95:208,24,0	0/0:29,0:29:82.78:0,83,1094	1/1:6,1:7:20.97:188,21,0	1/1:11,7:18:47.91:458,48,0	1/1:28,1:28:76.52:644,77,0	1/1:9,1:10:26.84:243,27,0	1/1:19,0:19:33.16:340,33,0	1/1:16,2:17:44.57:356,45,0	1/1:10,0:10:20.95:184,21,0	1/1:23,0:22:40.58:328,41,0	1/1:24,2:26:66.41:594,66,0	1/1:26,2:28:34.93:434,35,0	1/1:12,0:12:35.99:308,36,0
chr10	25745658	.	TTG	T	11956.41	PASS	AB=1.000;AC=49;AF=0.875;AN=56;BaseQRankSum=10.031;DP=541;FS=11.536;HRun=0;HaplotypeScore=139.1508;InbreedingCoeff=0.8518;MQ=63.24;MQ0=3;MQRankSum=-3.798;QD=26.39;ReadPosRankSum=4.044;VQSLOD=5.7234;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,21:22:44.92:513,45,0	1/1:1,5:6:17.84:195,18,0	0/0:30,0:7:17.70:0,18,130	0/1:19,0:9:7.59:8,0,50	1/1:4,32:36:97.02:991,97,0	1/1:4,11:15:44.79:468,45,0	1/1:0,8:8:24.07:279,24,0	0/0:29,0:29:18.57:0,19,689	1/1:2,10:12:29.88:323,30,0	1/1:3,35:38:97.99:971,98,0	1/1:1,25:26:71.73:758,72,0	1/1:3,8:11:32.76:341,33,0	1/1:7,13:20:47.83:518,48,0	1/1:9,13:22:56.66:576,57,0	1/1:11,0:11:29.83:385,30,0	1/1:4,8:11:26.78:286,27,0	0/0:29,0:29:51.50:0,51,902	1/1:1,6:7:20.82:209,21,0	1/1:9,8:17:46.88:436,47,0	1/1:3,27:29:84.99:914,85,0	1/1:2,7:9:26.36:275,26,0	1/1:8,10:18:24.41:438,24,0	1/1:3,15:17:44.90:498,45,0	1/1:3,7:10:23.87:250,24,0	1/1:1,18:18:36.11:432,36,0	1/1:3,24:27:74.55:802,75,0	1/1:4,23:27:59.72:653,60,0	1/1:0,12:12:36.11:438,36,0
chr10	25745659	.	TG	T	9606.48	PASS	AB=1.000;AC=50;AF=0.893;AN=56;BaseQRankSum=9.816;DP=536;FS=9.127;HRun=1;HaplotypeScore=136.8921;InbreedingCoeff=0.6441;MQ=63.27;MQ0=3;MQRankSum=-2.943;QD=20.14;ReadPosRankSum=3.664;VQSLOD=4.4395;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:21,2:22:44.50:387,45,0	1/1:6,0:6:17.81:153,18,0	0/0:30,0:7:12.73:0,13,101	0/1:19,0:9:11.08:11,0,39	1/1:35,0:35:96.87:797,97,0	1/1:15,0:15:44.64:379,45,0	1/1:8,0:8:24.01:218,24,0	0/1:29,0:29:10.84:11,0,500	1/1:12,0:12:29.84:258,30,0	1/1:36,0:36:97.28:789,97,0	1/1:26,0:26:71.63:615,72,0	1/1:12,0:12:35.44:287,35,0	1/1:20,0:20:47.66:414,48,0	1/1:23,0:23:59.31:491,59,0	1/1:2,8:10:29.80:284,30,0	1/1:12,0:11:26.78:241,27,0	0/0:28,1:29:40.26:0,40,681	1/1:7,0:7:20.80:171,21,0	1/1:17,0:17:46.76:363,47,0	1/1:28,2:29:85.19:736,85,0	1/1:9,0:9:26.32:219,26,0	1/1:16,0:16:24.32:343,24,0	1/1:17,1:17:44.82:397,45,0	1/1:10,0:10:23.81:203,24,0	1/1:18,1:18:36.05:342,36,0	1/1:26,1:27:74.42:637,74,0	1/1:26,0:26:59.63:514,60,0	1/1:12,0:12:36.06:346,36,0
chr10	25746598	.	CAAAA	C	7248.79	PASS	AB=0.774;AC=45;AF=0.833;AN=54;BaseQRankSum=8.668;DP=403;FS=13.273;HRun=7;HaplotypeScore=89.4666;InbreedingCoeff=0.4515;MQ=50.57;MQ0=9;MQRankSum=-5.916;QD=22.58;ReadPosRankSum=1.370;VQSLOD=1.3022;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	1/1:1,7:8:11.93:161,12,0	0/0:21,0:9:7.20:0,7,223	0/1:25,0:15:3:3,0,290	1/1:6,22:28:71.68:862,72,0	1/1:0,9:8:3.01:54,3,0	1/1:2,9:11:9.03:162,9,0	0/0:25,0:22:55.59:0,56,1124	1/1:0,8:8:3.01:54,3,0	1/1:1,13:14:38.98:496,39,0	1/1:2,19:21:44.98:684,45,0	1/1:0,13:12:18.06:323,18,0	1/1:1,10:9:12.04:215,12,0	1/1:0,10:10:12.04:213,12,0	1/1:2,8:10:6.02:108,6,0	1/1:1,12:12:18.06:323,18,0	0/0:22,0:22:65.93:0,66,1446	0/1:10,4:14:11.68:344,0,12	1/1:3,9:10:1.92:193,2,0	1/1:3,10:12:24.01:368,24,0	1/1:1,4:5:3.01:54,3,0	1/1:0,4:4:12.04:170,12,0	1/1:1,12:13:24.08:411,24,0	1/1:0,9:8:3.01:54,3,0	1/1:9,6:15:29.88:449,30,0	1/1:3,20:21:57.12:853,57,0	1/1:1,19:20:29.81:495,30,0	0/1:2,10:11:6.04:200,0,6
chr10	25747568	.	T	TCA	29423.53	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-11.949;DP=629;FS=0.425;HRun=0;HaplotypeScore=61.6412;InbreedingCoeff=0.9947;MQ=87.41;MQ0=0;MQRankSum=-7.372;QD=54.79;ReadPosRankSum=7.295;VQSLOD=5.4628;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,18:18:51.18:1036,51,0	1/1:0,10:11:24.08:487,24,0	0/0:24,0:24:72.24:0,72,1160	0/0:20,0:20:56.98:0,57,875	1/1:1,32:33:90.31:1828,90,0	1/1:1,25:26:69.24:1393,69,0	1/1:0,11:11:33.11:671,33,0	0/0:28,0:28:84.29:0,84,1362	1/1:1,17:18:48.16:969,48,0	1/1:0,24:25:72.25:1459,72,0	1/1:2,26:28:66.23:1333,66,0	1/1:2,19:21:51.18:1031,51,0	1/1:0,24:24:66.23:1340,66,0	1/1:0,28:28:75.26:1521,75,0	1/1:0,33:33:99:2012,99,0	1/1:1,17:18:51.17:1036,51,0	0/0:20,0:20:54.17:0,54,856	1/1:2,16:17:45.15:914,45,0	1/1:0,16:16:48.16:966,48,0	1/1:1,28:29:75.26:1515,75,0	1/1:1,17:18:45.15:914,45,0	1/1:2,18:20:54.18:1088,54,0	1/1:0,31:31:90.31:1828,90,0	1/1:1,9:10:27.09:549,27,0	1/1:1,29:31:81.28:1639,81,0	1/1:1,23:24:66.23:1341,66,0	1/1:0,39:39:99:2250,111,0	1/1:0,5:5:15.05:305,15,0
chr10	25750531	.	AAATT	A	5735.25	PASS	AB=1.000;AC=49;AF=0.875;AN=56;BaseQRankSum=10.881;DP=213;FS=0.575;HRun=0;HaplotypeScore=45.3239;InbreedingCoeff=0.6152;MQ=54.83;MQ0=0;MQRankSum=-2.504;QD=39.28;ReadPosRankSum=0.754;VQSLOD=4.5621;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,5:8:17.92:231,18,0	1/1:1,2:3:8.95:100,9,0	0/0:5,0:3:3.01:0,3,64	0/1:4,0:2:0:0,0,0	1/1:4,3:7:17.89:253,18,0	1/1:4,7:11:33.08:517,33,0	1/1:3,0:3:6.02:102,6,0	0/0:32,0:32:96.25:0,96,1685	1/1:0,2:2:3.01:57,3,0	1/1:5,1:6:18.04:224,18,0	1/1:4,5:9:27.07:424,27,0	1/1:1,1:2:6.02:108,6,0	1/1:1,5:6:18.06:335,18,0	1/1:2,4:6:18.04:280,18,0	1/1:2,0:2:6.02:75,6,0	1/1:2,3:5:15.04:249,15,0	0/0:30,0:30:87.23:0,87,1968	1/1:7,8:15:42.09:656,42,0	1/1:5,6:11:33.06:487,33,0	1/1:3,5:8:18.06:335,18,0	1/1:1,1:2:5.98:60,6,0	1/1:1,0:1:3.01:51,3,0	1/1:4,0:4:8.75:66,9,0	1/1:1,1:2:3.01:56,3,0	1/1:5,3:8:23.78:306,24,0	1/1:3,3:6:18.05:278,18,0	1/1:6,3:9:20.65:274,21,0	1/1:4,2:6:18:211,18,0
chr10	25750580	.	A	AT	5369.57	PASS	AB=0.900;AC=45;AF=0.865;AN=52;BaseQRankSum=0.887;DP=256;FS=0.000;HRun=8;HaplotypeScore=40.1336;InbreedingCoeff=0.6882;MQ=68.76;MQ0=1;MQRankSum=-2.422;QD=26.58;ReadPosRankSum=2.647;VQSLOD=5.0863;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,0:8:13.92:71,14,0	1/1:0,5:5:15.04:173,15,0	0/1:8,1:6:5.60:9,0,6	0/0:6,0:4:2.74:0,3,32	1/1:0,9:9:27.08:308,27,0	1/1:2,13:15:39.12:450,39,0	1/1:0,4:4:6.02:69,6,0	0/0:27,0:27:69.01:0,69,625	./.	1/1:2,6:8:21.04:227,21,0	1/1:1,16:17:31.44:462,31,0	1/1:0,7:7:18.05:208,18,0	1/1:2,5:7:18.05:207,18,0	1/1:1,7:8:21.06:242,21,0	1/1:0,6:6:15.04:173,15,0	1/1:0,6:6:18.05:205,18,0	0/0:21,0:21:60.03:0,60,549	1/1:4,11:16:32.93:361,33,0	1/1:6,13:19:45:498,45,0	1/1:2,6:8:21.02:225,21,0	1/1:0,3:3:9.03:101,9,0	./.	1/1:0,7:7:21.06:242,21,0	1/1:0,2:2:6.02:69,6,0	1/1:2,10:12:30.07:334,30,0	1/1:0,5:5:15.04:173,15,0	1/1:1,10:11:5.65:319,6,0	1/1:2,7:9:21.06:242,21,0
chr10	25750699	.	A	ATG	1581.30	PASS	AB=1.000;AC=46;AF=0.821;AN=56;BaseQRankSum=4.633;DP=292;FS=2.224;HRun=0;HaplotypeScore=80.6975;InbreedingCoeff=0.4968;MQ=55.57;MQ0=4;MQRankSum=1.834;QD=7.25;ReadPosRankSum=1.110;VQSLOD=3.3436;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:22,2:24:14.44:159,14,0	1/1:4,0:4:3:25,3,0	0/0:11,0:4:3.90:0,4,46	0/0:10,0:4:11.05:0,11,116	1/1:12,0:10:6.94:54,7,0	1/1:9,0:9:11.24:113,11,0	1/1:13,0:13:0.59:112,1,0	0/0:29,0:29:84.14:0,84,1132	1/1:8,0:8:4.37:48,4,0	0/1:10,0:9:13.63:78,0,14	1/1:7,0:7:5.81:45,6,0	1/1:12,0:12:7.27:20,7,0	1/1:7,0:7:9.78:68,10,0	1/1:4,0:4:6.56:21,7,0	1/1:12,1:16:13.76:61,14,0	1/1:6,0:6:1.31:4,1,0	0/0:24,0:24:72.22:0,72,1024	1/1:6,0:6:3.87:11,4,0	1/1:11,1:12:19.08:186,19,0	1/1:4,0:4:5.53:68,6,0	0/1:5,0:5:0:0,0,0	1/1:5,0:4:1.62:5,2,0	1/1:4,0:4:4.55:28,5,0	1/1:15,0:15:13.51:75,14,0	1/1:9,0:9:14.04:73,14,0	1/1:11,0:11:17.09:166,17,0	1/1:4,0:4:12:116,12,0	1/1:11,0:10:20.34:194,20,0
chr10	25751664	.	C	CAACGA	3477.35	PASS	AB=1.000;AC=45;AF=0.865;AN=52;BaseQRankSum=3.135;DP=317;FS=0.000;HRun=0;HaplotypeScore=156.8194;InbreedingCoeff=0.5021;MQ=60.23;MQ0=0;MQRankSum=-5.745;QD=12.93;ReadPosRankSum=-4.927;VQSLOD=1.6894;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,0:10:1.40:42,1,0	1/1:5,0:5:5.99:74,6,0	0/0:19,0:13:21.44:0,21,292	0/0:9,0:6:7.13:0,7,94	1/1:19,0:18:22.40:199,22,0	1/1:12,0:12:24.50:257,25,0	1/1:9,0:9:7.13:100,7,0	0/0:16,0:15:11.23:0,11,299	1/1:7,0:7:1.86:55,2,0	1/1:14,0:14:30.05:298,30,0	1/1:8,0:7:12.82:101,13,0	1/1:9,0:9:0.12:128,0,0	1/1:10,0:10:12.42:136,12,0	1/1:9,0:9:14.98:143,15,0	1/1:4,5:11:14.87:184,15,0	1/1:10,0:10:1.69:114,2,0	0/1:13,0:13:10.91:11,0,226	1/1:3,0:2:3:27,3,0	1/1:13,0:11:25.08:202,25,0	1/1:24,0:24:40.93:293,41,0	./.	1/1:6,0:6:14.76:116,15,0	1/1:11,0:10:21.50:167,22,0	./.	1/1:17,0:17:33.78:276,34,0	1/1:23,0:22:41.55:346,42,0	1/1:14,0:13:14.16:126,14,0	1/1:11,0:11:12.30:82,12,0
chr10	25751849	.	C	CCA	6060.57	PASS	AB=0.811;AC=47;AF=0.839;AN=56;BaseQRankSum=-2.638;DP=354;FS=1.914;HRun=0;HaplotypeScore=318.6014;InbreedingCoeff=0.3190;MQ=36.42;MQ0=2;MQRankSum=0.126;QD=18.09;ReadPosRankSum=1.601;VQSLOD=4.4230;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,6:15:30.74:220,31,0	1/1:1,9:10:15.41:228,15,0	0/0:8,0:2:3:0,3,25	0/0:6,0:4:4.33:0,4,42	1/1:3,17:21:33.33:390,33,0	1/1:3,10:13:31.50:260,31,0	1/1:5,11:16:27.88:289,28,0	0/1:12,0:15:35.67:36,0,51	1/1:6,6:12:6.49:113,6,0	1/1:11,13:24:25.26:540,25,0	1/1:5,11:16:29.77:396,30,0	1/1:6,10:16:27.85:265,28,0	1/1:4,11:15:35.33:307,35,0	1/1:2,8:10:27.39:243,27,0	0/1:13,0:13:14.25:20,0,14	1/1:7,8:15:8.25:177,8,0	0/0:5,0:5:0.09:0,0,1	1/1:1,1:2:3:29,3,0	1/1:0,6:6:18.06:276,18,0	1/1:5,12:16:42.69:367,43,0	1/1:3,0:2:2.60:19,3,0	1/1:7,10:14:29.31:227,29,0	1/1:2,12:14:34.27:389,34,0	0/1:1,2:3:3.33:17,0,3	1/1:6,9:15:5.52:238,6,0	1/1:8,12:20:19.47:463,19,0	1/1:12,9:21:20.34:401,20,0	1/1:1,5:5:15.03:152,15,0
chr10	25751851	.	G	GAA	2835.43	PASS	AB=0.867;AC=42;AF=0.750;AN=56;BaseQRankSum=1.166;DP=366;FS=1.730;HRun=1;HaplotypeScore=336.5683;InbreedingCoeff=0.2931;MQ=36.22;MQ0=3;MQRankSum=-0.440;QD=8.44;ReadPosRankSum=2.543;VQSLOD=0.0725;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,1:16:21.76:135,22,0	1/1:9,1:10:5.04:81,5,0	0/0:8,0:2:2.84:0,3,14	0/0:6,0:4:4.33:0,4,37	1/1:20,1:21:6.36:124,6,0	1/1:11,2:13:19.09:116,19,0	0/1:12,4:16:4.58:96,0,5	1/1:14,3:16:2.42:231,2,0	0/1:9,3:12:0.79:21,0,1	1/1:22,3:25:20.79:326,21,0	1/1:16,1:17:6.26:217,6,0	0/1:17,0:17:5.04:45,0,5	1/1:15,0:15:18.02:136,18,0	1/1:9,1:10:13.31:66,13,0	0/0:13,0:13:10.72:0,11,92	1/1:16,0:15:16.20:95,16,0	0/1:7,0:7:14:27,0,14	0/1:1,1:2:4.94:5,0,17	1/1:3,3:6:14.22:169,14,0	1/1:14,3:16:12.30:131,12,0	0/0:3,0:2:3.07:0,3,11	1/1:17,1:15:12.54:80,13,0	1/1:11,3:14:24.35:259,24,0	1/1:3,0:3:5.06:21,5,0	0/1:14,1:15:10.04:59,0,10	1/1:20,0:20:40.86:259,41,0	1/1:21,2:23:8.80:197,9,0	1/1:6,0:5:12.78:87,13,0
chr10	25751858	.	AAG	A	3938.83	PASS	AB=0.909;AC=49;AF=0.875;AN=56;BaseQRankSum=5.851;DP=367;FS=10.646;HRun=0;HaplotypeScore=247.6258;InbreedingCoeff=0.2798;MQ=35.88;MQ0=14;MQRankSum=2.669;QD=11.03;ReadPosRankSum=4.423;VQSLOD=1.5160;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,5:16:21.70:157,22,0	1/1:2,6:8:23.03:140,23,0	1/1:7,0:2:2.22:7,2,0	0/0:6,0:4:4.59:0,5,36	1/1:2,17:19:27.59:143,28,0	1/1:5,8:13:31.71:158,32,0	1/1:10,7:17:33.19:172,33,0	0/1:21,0:18:99:112,0,209	1/1:9,3:12:7.30:81,7,0	1/1:14,10:23:57.92:469,58,0	1/1:6,10:15:28.93:197,29,0	1/1:10,7:17:32.32:179,32,0	1/1:4,11:15:39.45:206,39,0	1/1:6,5:9:2.53:72,3,0	1/1:10,1:11:15.37:54,15,0	1/1:9,8:16:32:188,32,0	0/1:5,3:8:19.93:20,0,63	0/1:2,0:2:11.35:11,0,16	1/1:3,1:4:11.77:85,12,0	1/1:8,7:14:27.74:163,28,0	0/0:4,0:2:1.81:0,2,5	1/1:8,11:16:25.24:123,25,0	1/1:6,8:13:31.49:205,31,0	1/1:3,1:2:2.60:11,3,0	1/1:9,6:15:31.36:163,31,0	1/1:9,10:19:53.34:373,53,0	1/1:16,7:23:56.25:359,56,0	1/1:3,5:5:14.65:89,15,0
chr10	25751878	.	GGA	G	383.91	PASS	AB=0.958;AC=20;AF=0.370;AN=54;BaseQRankSum=3.057;DP=443;FS=2.775;HRun=0;HaplotypeScore=243.1788;InbreedingCoeff=-0.3842;MQ=33.19;MQ0=21;MQRankSum=0.091;QD=1.20;ReadPosRankSum=0.382;VQSLOD=2.6945;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:21,2:22:24.30:24,0,86	0/1:8,0:8:6.76:7,0,67	0/0:6,0:1:0:0,0,0	0/1:4,0:3:3.12:3,0,5	0/0:20,0:20:6.15:0,6,35	0/0:16,0:16:8.67:0,9,105	0/1:23,0:23:44.73:58,0,45	0/0:36,0:32:58.63:0,59,651	0/1:13,0:13:35.86:36,0,103	0/1:21,2:22:22.82:23,0,390	1/1:16,0:14:1.52:14,2,0	0/1:23,0:23:33.97:34,0,133	0/1:15,2:17:27.01:81,0,27	0/1:15,0:13:11.01:11,0,163	0/1:8,6:14:14.16:67,0,14	0/1:17,0:15:24.30:24,0,170	0/0:11,0:10:6.41:0,6,101	0/1:6,0:6:8.74:30,0,9	0/0:7,0:7:3.02:0,3,75	0/1:14,1:14:0.42:1,0,0	./.	0/1:20,1:18:6.70:7,0,54	0/1:12,0:11:6.32:15,0,6	0/0:11,0:9:0.89:0,1,2	0/1:19,0:18:14.16:14,0,94	0/1:21,1:22:29.95:30,0,286	0/1:26,1:27:42.44:42,0,260	0/0:11,0:6:10.27:0,10,58
chr10	25752239	.	AGAT	A	3821.01	PASS	AC=46;AF=0.852;AN=54;BaseQRankSum=7.970;DP=271;FS=17.374;HRun=0;HaplotypeScore=85.2530;InbreedingCoeff=0.7318;MQ=78.40;MQ0=9;MQRankSum=-7.599;QD=22.88;ReadPosRankSum=2.283;VQSLOD=2.4012;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,0:3:9.03:164,9,0	1/1:3,0:3:5.94:41,6,0	0/0:10,0:9:17.80:0,18,342	0/0:29,0:16:29.13:0,29,441	1/1:18,1:19:20.61:155,21,0	1/1:9,0:9:17.85:160,18,0	1/1:6,1:6:18.06:297,18,0	0/0:44,0:44:99:0,129,2839	1/1:5,0:5:11.95:149,12,0	1/1:7,1:7:20.93:225,21,0	1/1:6,0:5:8.94:118,9,0	1/1:5,1:5:9.02:138,9,0	1/1:10,0:10:26.67:267,27,0	1/1:1,0:1:2.96:19,3,0	1/1:9,0:8:9.03:158,9,0	1/1:5,0:4:12.04:187,12,0	0/0:16,0:16:42.14:0,42,904	1/1:5,0:5:11.96:149,12,0	1/1:6,3:8:24.02:296,24,0	1/1:6,0:4:8.99:123,9,0	./.	1/1:5,0:4:5.95:73,6,0	1/1:2,0:2:2.96:19,3,0	1/1:2,0:2:3.01:44,3,0	1/1:12,0:11:26.27:168,26,0	1/1:10,1:11:29.90:292,30,0	1/1:12,1:12:32.66:377,33,0	1/1:11,0:11:23.87:203,24,0
chr10	25752241	.	AT	A	2635.16	PASS	AC=46;AF=0.852;AN=54;BaseQRankSum=9.370;DP=267;FS=11.449;HRun=2;HaplotypeScore=80.7173;InbreedingCoeff=0.7250;MQ=78.59;MQ0=9;MQRankSum=-7.333;QD=16.37;ReadPosRankSum=2.551;VQSLOD=2.6681;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,3:3:9.02:93,9,0	1/1:2,1:3:5.97:45,6,0	0/0:11,0:9:17.55:0,18,222	0/0:31,0:16:17.80:0,18,240	1/1:19,0:19:20.93:185,21,0	1/1:8,1:9:17.95:155,18,0	1/1:3,4:6:17.94:163,18,0	0/0:44,0:44:99:0,125,1716	1/1:3,2:5:11.98:105,12,0	1/1:6,1:6:14.98:136,15,0	1/1:4,2:5:8.99:82,9,0	1/1:4,2:5:9.02:96,9,0	1/1:7,3:10:26.90:218,27,0	1/1:1,0:1:2.98:22,3,0	1/1:6,3:8:9:84,9,0	1/1:2,3:4:12.01:120,12,0	0/0:16,0:16:39.22:0,39,507	1/1:4,1:5:11.99:114,12,0	1/1:8,1:8:23.87:220,24,0	1/1:3,3:4:8.98:76,9,0	./.	1/1:1,4:4:5.99:52,6,0	1/1:2,0:2:2.98:22,3,0	1/1:2,0:2:2.97:20,3,0	1/1:10,1:10:23.87:179,24,0	1/1:9,0:9:20.96:183,21,0	1/1:8,5:12:32.94:286,33,0	1/1:9,0:9:16.85:136,17,0
chr10	25752242	.	T	TA	4344.33	PASS	AC=46;AF=0.852;AN=54;BaseQRankSum=9.198;DP=274;FS=12.778;HRun=1;HaplotypeScore=80.5993;InbreedingCoeff=0.7319;MQ=77.57;MQ0=10;MQRankSum=-8.309;QD=25.86;ReadPosRankSum=2.166;VQSLOD=3.5676;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:4:9.02:93,9,0	1/1:1,2:3:6.02:95,6,0	0/0:11,0:9:17.69:0,18,222	0/0:31,0:16:18.85:0,19,239	1/1:2,18:20:21.06:310,21,0	1/1:2,7:9:18.06:265,18,0	1/1:7,1:7:20.52:203,21,0	0/0:41,0:43:99:0,126,1678	1/1:3,3:6:12.03:155,12,0	1/1:2,4:5:15.05:212,15,0	1/1:3,4:6:9.03:122,9,0	1/1:4,3:6:11.62:115,12,0	1/1:4,6:10:27.07:370,27,0	1/1:1,1:2:3.01:48,3,0	1/1:4,4:7:9:84,9,0	1/1:4,1:4:12.02:129,12,0	0/0:11,0:16:42.01:0,42,519	1/1:1,4:5:12.04:163,12,0	1/1:4,5:8:24.08:336,24,0	1/1:4,2:4:9.01:102,9,0	./.	1/1:4,1:4:6.02:78,6,0	1/1:1,2:3:3.01:48,3,0	1/1:1,1:2:2.97:20,3,0	1/1:2,10:11:24.08:380,24,0	1/1:2,7:9:21.07:307,21,0	1/1:8,6:13:33.08:432,33,0	1/1:0,8:8:18.06:277,18,0
chr10	25752262	.	AT	A	1613.95	PASS	AC=40;AF=0.833;AN=48;BaseQRankSum=8.893;DP=276;FS=3.085;HRun=2;HaplotypeScore=82.7581;InbreedingCoeff=0.5683;MQ=61.46;MQ0=17;MQRankSum=-8.365;QD=9.96;ReadPosRankSum=5.502;VQSLOD=1.7727;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	1/1:2,0:2:5.97:45,6,0	0/0:9,0:3:2.90:0,3,17	0/0:32,0:13:20.05:0,20,190	1/1:22,4:25:20.93:185,21,0	1/1:7,3:8:14.94:125,15,0	1/1:1,4:5:2.84:14,3,0	0/0:44,0:44:99:0,119,1626	1/1:6,0:6:5.97:45,6,0	1/1:7,2:7:14.98:144,15,0	1/1:8,0:7:5.99:56,6,0	1/1:2,2:4:2.42:35,2,0	1/1:10,2:10:20.91:170,21,0	1/1:3,0:3:2.98:22,3,0	./.	1/1:0,3:3:3.01:36,3,0	0/0:18,0:18:45.20:0,45,562	1/1:4,2:5:5.97:46,6,0	1/1:4,1:5:14.65:116,15,0	1/1:3,3:4:2.98:22,3,0	./.	1/1:2,1:2:2.98:22,3,0	1/1:3,1:3:2.98:22,3,0	./.	1/1:16,0:14:23.87:179,24,0	1/1:8,5:12:23.97:218,24,0	1/1:9,0:9:17.42:122,17,0	1/1:9,3:11:17.10:133,17,0
chr10	25752263	.	T	TA	2977.58	PASS	AB=1.000;AC=39;AF=0.848;AN=46;BaseQRankSum=8.643;DP=254;FS=3.074;HRun=1;HaplotypeScore=70.7074;InbreedingCoeff=0.5526;MQ=65.49;MQ0=17;MQRankSum=-7.986;QD=20.54;ReadPosRankSum=5.372;VQSLOD=4.0088;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	1/1:0,2:2:6.02:95,6,0	0/1:10,0:4:1.36:1,0,11	0/0:32,0:13:19.39:0,19,183	1/1:4,18:21:21.07:321,21,0	1/1:3,5:6:15.05:235,15,0	./.	0/0:45,0:45:99:0,120,1579	1/1:0,5:5:6.02:95,6,0	1/1:2,5:5:15.05:219,15,0	1/1:1,6:6:6.02:81,6,0	1/1:2,1:3:5.61:54,6,0	1/1:2,8:9:21.07:322,21,0	1/1:0,3:3:3.01:48,3,0	./.	1/1:3,0:3:3.01:45,3,0	0/0:18,0:18:47.99:0,48,575	1/1:2,3:4:6.02:95,6,0	1/1:1,3:4:12.04:188,12,0	1/1:3,3:4:3.01:48,3,0	./.	1/1:1,1:2:3.01:48,3,0	1/1:1,2:2:3.01:48,3,0	./.	1/1:0,14:13:24.08:380,24,0	1/1:5,6:10:24.08:343,24,0	1/1:0,8:8:15.05:238,15,0	1/1:7,4:10:6.67:215,7,0
chr10	25752409	.	GGACATCTATTCAAGA	G	20024.11	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=13.179;DP=356;FS=79.319;HRun=0;HaplotypeScore=184.4346;InbreedingCoeff=0.8833;MQ=91.21;MQ0=0;MQRankSum=-12.643;QD=76.14;ReadPosRankSum=5.641;VQSLOD=1.5600;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,10:16:27.09:1022,27,0	1/1:2,8:10:24.08:845,24,0	0/0:18,0:18:54.19:0,54,2885	0/0:20,0:20:57.20:0,57,3122	1/1:3,9:12:24.08:718,24,0	1/1:0,13:13:33.11:1428,33,0	1/1:2,14:16:36.12:1544,36,0	0/0:33,0:33:96.32:0,96,5978	1/1:3,11:14:27.09:1123,27,0	1/1:1,7:7:18.06:745,18,0	1/1:2,5:7:15.05:467,15,0	1/1:2,11:13:24.08:1018,24,0	1/1:4,10:14:30.10:1251,30,0	1/1:0,9:9:24.08:875,24,0	1/1:3,16:19:36.12:1500,36,0	1/1:1,12:13:30.10:1337,30,0	0/0:22,0:22:60.19:0,60,3962	1/1:6,4:10:6.02:268,6,0	1/1:4,5:9:15.05:668,15,0	1/1:0,6:6:15.05:366,15,0	1/1:4,7:11:12.04:447,12,0	1/1:1,4:5:6.02:225,6,0	1/1:1,7:8:18.06:567,18,0	1/1:3,7:10:9.02:250,9,0	1/1:1,7:8:15.05:463,15,0	1/1:2,18:20:51.17:1830,51,0	1/1:1,6:7:18.06:665,18,0	1/1:1,4:5:9.03:401,9,0
chr10	25752817	.	GT	G	3162.55	PASS	AB=1.000;AC=54;AF=0.964;AN=56;BaseQRankSum=1.860;DP=287;FS=21.064;HRun=1;HaplotypeScore=76.1044;InbreedingCoeff=-0.0365;MQ=68.73;MQ0=0;MQRankSum=-1.026;QD=11.02;ReadPosRankSum=4.136;VQSLOD=0.3273;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:16:41.19:197,41,0	1/1:8,0:8:2:70,2,0	0/1:11,0:11:12.04:12,0,23	0/1:10,0:10:17.72:50,0,18	1/1:15,0:15:27.87:161,28,0	1/1:10,0:10:22.04:106,22,0	1/1:4,0:2:5.81:32,6,0	1/1:11,0:11:19.73:63,20,0	1/1:12,0:12:29.67:139,30,0	1/1:12,0:12:30.87:139,31,0	1/1:9,1:10:6.15:113,6,0	1/1:12,0:12:11.90:105,12,0	1/1:8,0:8:1.47:80,1,0	1/1:15,0:15:39.82:212,40,0	1/1:7,0:7:19.91:105,20,0	1/1:4,0:4:11.11:54,11,0	1/1:8,0:8:19.89:99,20,0	1/1:3,0:3:8.01:35,8,0	1/1:7,0:6:15.72:70,16,0	1/1:8,2:10:26:186,26,0	1/1:5,0:5:10.79:48,11,0	1/1:9,2:11:28.85:172,29,0	1/1:16,0:16:27.98:220,28,0	1/1:14,0:14:34.13:181,34,0	1/1:13,0:13:37.76:211,38,0	1/1:16,0:16:40.12:180,40,0	1/1:13,0:13:34.81:156,35,0	1/1:6,0:6:13.77:66,14,0
chr10	25754824	.	T	TA	738.54	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-0.622;DP=574;FS=9.844;HRun=6;HaplotypeScore=99.3284;InbreedingCoeff=0.8504;MQ=72.42;MQ0=0;MQRankSum=-1.790;QD=27.35;ReadPosRankSum=-0.380;VQSLOD=3.0164;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,20:27:73.03:833,73,0	0/0:11,0:11:30.06:0,30,304	0/0:25,0:22:17.24:0,17,220	0/0:10,0:8:6.83:0,7,45	0/0:25,0:25:69.03:0,69,664	0/0:32,0:32:84:0,84,810	0/0:13,0:13:30.05:0,30,298	0/0:20,0:20:39.06:0,39,390	0/0:18,0:18:45.06:0,45,439	0/0:27,0:27:75.15:0,75,752	0/0:19,0:19:57.07:0,57,560	0/0:19,0:19:36.33:0,36,417	0/0:26,0:26:69.10:0,69,686	0/0:17,0:17:45.07:0,45,450	0/0:27,0:27:81.14:0,81,810	0/0:24,0:24:63.07:0,63,611	0/0:26,0:26:63.10:0,63,631	0/0:16,0:16:41.93:0,42,393	0/0:18,0:18:51.07:0,51,505	0/0:34,0:34:99:0,99,980	0/0:4,0:4:9.02:0,9,91	0/0:19,0:19:51.09:0,51,513	0/0:23,0:23:66.02:0,66,641	0/0:18,0:18:48.03:0,48,468	0/0:17,0:17:45.09:0,45,452	0/0:25,0:25:63.08:0,63,609	0/0:29,0:29:71.94:0,72,697	0/0:5,0:5:15.03:0,15,152
chr10	25754870	.	T	TTA	24855.13	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-10.811;DP=621;FS=3.887;HRun=0;HaplotypeScore=66.1473;InbreedingCoeff=0.9793;MQ=84.07;MQ0=2;MQRankSum=-5.338;QD=47.34;ReadPosRankSum=6.479;VQSLOD=6.2759;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,19:23:63.19:1075,63,0	1/1:1,12:13:33.11:604,33,0	0/0:24,0:23:60.18:0,60,836	0/0:17,0:17:34.52:0,35,612	1/1:2,33:36:81.28:1485,81,0	1/1:1,31:32:90.31:1650,90,0	1/1:2,22:24:57.20:1045,57,0	0/0:34,0:34:93.31:0,93,1317	1/1:1,15:16:39.13:715,39,0	1/1:1,32:34:93.32:1696,93,0	1/1:1,20:21:60.21:1097,60,0	1/1:0,15:15:39.13:715,39,0	1/1:1,20:21:57.20:1045,57,0	1/1:2,10:12:30.10:542,30,0	1/1:2,22:24:60.21:1100,60,0	1/1:2,24:26:63.22:1155,63,0	0/0:21,0:21:57.19:0,57,817	1/1:0,13:13:39.13:714,39,0	1/1:2,15:19:54.17:954,54,0	1/1:3,30:33:84.29:1498,84,0	1/1:1,5:6:15.05:275,15,0	1/1:1,28:29:81.28:1466,81,0	1/1:1,26:29:72.24:1296,72,0	1/1:0,13:13:33.11:605,33,0	1/1:0,20:21:57.20:1044,57,0	1/1:1,28:28:81.28:1485,81,0	1/1:0,29:30:78.10:1430,78,0	1/1:2,4:4:9.03:165,9,0
chr10	25755260	.	CTCGAGGAGT	C	30602.58	PASS	AB=0.971;AC=54;AF=0.964;AN=56;BaseQRankSum=2.454;DP=660;FS=21.110;HRun=0;HaplotypeScore=407.0875;InbreedingCoeff=-0.0480;MQ=65.89;MQ0=0;MQRankSum=-4.559;QD=46.37;ReadPosRankSum=1.932;VQSLOD=3.5838;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:32,1:33:54.08:1150,54,0	1/1:10,0:10:21.07:585,21,0	0/1:17,0:17:54.71:356,0,55	0/1:15,1:16:51.63:315,0,52	1/1:35,1:36:60.19:1467,60,0	1/1:22,0:22:48.16:1287,48,0	1/1:17,0:17:27.09:731,27,0	1/1:19,5:24:27.05:517,27,0	1/1:33,0:33:69.24:1919,69,0	1/1:21,0:21:48.16:1278,48,0	1/1:13,5:18:36.08:784,36,0	1/1:30,0:30:60.18:1552,60,0	1/1:36,0:36:75.24:1938,75,0	1/1:33,0:33:72.25:1976,72,0	1/1:40,0:40:87.30:2467,87,0	1/1:39,0:39:87.30:2280,87,0	1/1:14,0:14:18.06:505,18,0	1/1:5,0:5:3.01:86,3,0	1/1:15,0:15:15.05:437,15,0	1/1:26,0:26:60.17:1547,60,0	1/1:13,0:13:15.01:311,15,0	1/1:34,0:34:66.21:1675,66,0	1/1:21,0:21:33.11:898,33,0	1/1:12,0:12:8.88:121,9,0	1/1:28,0:28:48.16:1349,48,0	1/1:28,0:28:45.15:1275,45,0	1/1:33,1:33:51.17:1373,51,0	1/1:5,0:5:15.05:424,15,0
chr10	25755262	.	CGAGGA	C	23143.50	PASS	AB=1.000;AC=53;AF=0.946;AN=56;BaseQRankSum=2.500;DP=643;FS=5.383;HRun=0;HaplotypeScore=377.6881;InbreedingCoeff=-0.0568;MQ=64.58;MQ0=0;MQRankSum=-4.145;QD=35.99;ReadPosRankSum=2.885;VQSLOD=3.7178;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:33,0:33:54.07:861,54,0	1/1:10,0:10:21.07:425,21,0	0/1:16,0:16:40.73:146,0,41	0/1:11,0:15:51.59:246,0,52	1/1:36,0:36:59.99:1093,60,0	1/1:22,0:22:48.16:970,48,0	1/1:16,0:16:27.09:563,27,0	1/1:24,0:24:27.05:425,27,0	1/1:33,0:33:69.24:1463,69,0	1/1:20,0:20:48.16:991,48,0	1/1:18,0:18:36.08:616,36,0	1/1:27,1:28:60.18:1205,60,0	1/1:35,0:35:75.24:1512,75,0	1/1:32,0:32:72.25:1492,72,0	1/1:38,0:38:87.30:1848,87,0	1/1:39,0:39:87.29:1723,87,0	1/1:14,0:14:18.06:387,18,0	1/1:5,0:5:3.01:65,3,0	1/1:14,0:14:15.05:320,15,0	1/1:23,3:26:60.17:1181,60,0	1/1:13,0:13:15.01:246,15,0	1/1:34,0:34:66.21:1309,66,0	1/1:20,0:20:33.11:677,33,0	0/1:12,0:12:1.02:74,0,1	1/1:27,0:27:48.16:972,48,0	1/1:26,0:26:45.15:966,45,0	1/1:31,0:31:51.17:1044,51,0	1/1:5,0:5:15.05:323,15,0
chr10	25755263	.	GA	G	3040.61	PASS	AB=0.971;AC=48;AF=0.857;AN=56;BaseQRankSum=6.759;DP=487;FS=14.605;HRun=1;HaplotypeScore=426.8708;InbreedingCoeff=-0.1508;MQ=71.03;MQ0=0;MQRankSum=-3.108;QD=6.24;ReadPosRankSum=9.945;VQSLOD=-0.3752;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:22:45.57:66,0,46	0/1:8,0:8:11.08:52,0,11	0/1:8,3:15:22.69:29,0,23	0/1:12,1:15:34.91:35,0,60	1/1:23,0:23:17.85:146,18,0	1/1:17,0:17:34.66:152,35,0	1/1:13,0:13:22.75:92,23,0	0/1:12,0:12:19.94:30,0,20	0/1:30,0:30:0.09:167,0,0	1/1:18,0:18:24.67:146,25,0	1/1:14,0:14:21.83:90,22,0	1/1:23,0:23:15.59:144,16,0	1/1:27,0:27:39.90:205,40,0	1/1:27,0:27:27.80:199,28,0	1/1:31,0:31:61.39:290,61,0	1/1:31,0:31:33.76:224,34,0	1/1:7,0:7:15.99:65,16,0	1/1:2,0:2:5.27:21,5,0	1/1:7,0:7:6.97:40,7,0	1/1:24,0:24:46.44:195,46,0	1/1:11,0:11:12:50,12,0	1/1:26,0:27:52.33:206,52,0	1/1:14,0:14:14.46:93,14,0	0/1:9,0:9:10.81:12,0,11	1/1:19,0:19:9.22:115,9,0	0/1:18,0:18:12.17:111,0,12	1/1:18,0:18:28.41:149,28,0	1/1:5,0:5:12.82:49,13,0
chr10	25755266	.	GA	G	8304.82	PASS	AB=0.675;AC=43;AF=0.768;AN=56;BaseQRankSum=7.603;DP=474;FS=3.180;HRun=1;HaplotypeScore=400.5597;InbreedingCoeff=-0.3135;MQ=64.15;MQ0=0;MQRankSum=-1.991;QD=17.52;ReadPosRankSum=11.473;VQSLOD=2.2004;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:7,16:23:23.07:228,0,23	1/1:2,6:8:20.59:185,21,0	0/1:11,0:11:16.95:17,0,70	0/1:12,0:12:28.01:28,0,66	1/1:4,18:22:12.67:381,13,0	1/1:3,14:17:44.95:405,45,0	0/1:4,8:12:61.54:189,0,62	0/1:10,4:14:99:100,0,156	0/1:7,22:29:99:509,0,123	0/1:5,14:19:50.89:348,0,51	0/1:6,8:14:11.09:175,0,11	1/1:4,16:20:22.60:404,23,0	1/1:3,21:24:15.70:536,16,0	0/1:4,23:27:20.11:527,0,20	1/1:4,29:33:2.48:698,2,0	1/1:6,23:29:30.45:651,30,0	1/1:1,6:7:18.02:166,18,0	0/1:1,1:2:22.32:22,0,42	1/1:2,5:7:10.10:133,10,0	1/1:6,18:24:50.91:476,51,0	1/1:6,5:11:11.46:108,11,0	1/1:5,18:23:39.48:478,39,0	1/1:3,11:14:28.53:266,29,0	0/1:5,5:10:21.64:22,0,27	1/1:3,16:19:42.71:392,43,0	0/1:3,15:18:79.36:360,0,79	0/1:7,13:20:16.46:364,0,16	1/1:0,5:5:15.01:136,15,0
chr10	25755271	.	CG	C	4948.12	PASS	AB=0.631;AC=38;AF=0.679;AN=56;BaseQRankSum=8.449;DP=449;FS=3.878;HRun=1;HaplotypeScore=404.3463;InbreedingCoeff=-0.4770;MQ=54.01;MQ0=0;MQRankSum=-0.925;QD=11.02;ReadPosRankSum=11.205;VQSLOD=2.3515;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:7,16:23:69.85:125,0,70	1/1:1,6:7:17.04:105,17,0	0/1:6,0:6:22.78:65,0,23	0/1:8,0:8:39.23:39,0,43	0/1:3,18:21:17.79:210,0,18	1/1:2,14:16:18.31:226,18,0	0/1:4,8:12:97.29:113,0,97	0/1:10,4:14:55.26:55,0,198	0/1:7,22:29:99:304,0,219	0/1:3,14:17:78.29:209,0,78	0/1:6,8:14:18.56:93,0,19	0/1:3,16:19:31.15:210,0,31	0/1:2,21:23:18.92:287,0,19	0/1:4,23:27:62.95:314,0,63	0/1:4,29:33:35.34:422,0,35	0/1:2,23:25:13.03:327,0,13	1/1:1,6:7:17.70:114,18,0	0/1:1,1:2:14.62:15,0,39	1/1:2,5:7:9.94:97,10,0	1/1:4,18:22:44.58:314,45,0	1/1:6,5:11:13.46:88,13,0	1/1:4,18:22:5.72:261,6,0	1/1:3,11:14:20.13:159,20,0	0/1:5,5:10:12.83:13,0,27	1/1:3,16:19:35.86:249,36,0	0/1:3,15:18:79.97:249,0,80	0/1:4,14:18:76.83:194,0,77	1/1:0,5:5:14.52:91,15,0
chr10	25755275	.	G	GGC	13885.45	PASS	AB=0.938;AC=54;AF=0.964;AN=56;BaseQRankSum=2.097;DP=441;FS=6.758;HRun=0;HaplotypeScore=381.0984;InbreedingCoeff=-0.0274;MQ=52.40;MQ0=0;MQRankSum=-3.282;QD=31.49;ReadPosRankSum=3.275;VQSLOD=3.2782;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:17,6:23:53.41:622,53,0	1/1:6,1:7:21.05:232,21,0	0/1:5,0:6:17.57:18,0,33	0/1:6,1:7:17.56:130,0,18	1/1:18,3:21:60.12:625,60,0	1/1:14,2:16:48.14:546,48,0	1/1:8,4:12:36.11:425,36,0	1/1:5,5:10:27.09:371,27,0	1/1:22,7:29:87.23:1010,87,0	1/1:14,3:17:51.14:623,51,0	1/1:10,2:12:20.58:242,21,0	1/1:17,2:19:56.69:610,57,0	1/1:21,2:23:69.16:753,69,0	1/1:23,4:27:81.21:892,81,0	1/1:29,4:33:99:1080,99,0	1/1:23,2:25:74.87:810,75,0	1/1:6,1:7:18.05:201,18,0	1/1:1,1:2:6.02:80,6,0	1/1:5,2:7:21.07:284,21,0	1/1:18,3:21:63.16:691,63,0	1/1:5,6:11:24.06:278,24,0	1/1:18,4:22:66.16:716,66,0	1/1:12,2:14:39.09:423,39,0	1/1:5,5:10:15.04:168,15,0	1/1:16,3:19:57.13:608,57,0	1/1:15,3:18:53.66:659,54,0	1/1:14,4:18:54.13:617,54,0	1/1:5,0:5:15.03:173,15,0
chr10	25755277	.	CA	C	9124.38	PASS	AB=0.778;AC=55;AF=0.982;AN=56;BaseQRankSum=3.205;DP=440;FS=0.000;HRun=1;HaplotypeScore=390.0037;InbreedingCoeff=-0.0319;MQ=52.35;MQ0=0;MQRankSum=-3.841;QD=20.74;ReadPosRankSum=4.016;VQSLOD=3.0553;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:16,6:23:46.67:370,47,0	1/1:6,1:7:20.72:150,21,0	1/1:5,1:6:1.32:47,1,0	0/1:5,2:7:38.50:60,0,38	1/1:18,3:21:59.31:414,59,0	1/1:14,2:16:47.76:361,48,0	1/1:8,4:12:35.82:272,36,0	1/1:4,5:9:27:238,27,0	1/1:22,7:29:86.59:658,87,0	1/1:14,3:17:50.89:419,51,0	1/1:10,2:12:26.84:198,27,0	1/1:17,2:19:55.60:398,56,0	1/1:21,2:23:68.54:501,69,0	1/1:23,4:27:80.30:587,80,0	1/1:29,4:33:98.10:713,98,0	1/1:23,2:25:74.36:551,74,0	1/1:6,1:7:17.89:131,18,0	1/1:1,1:2:6:52,6,0	1/1:5,2:7:20.99:181,21,0	1/1:18,3:21:62.55:459,63,0	1/1:5,6:11:23.65:166,24,0	1/1:18,4:22:65.06:461,65,0	1/1:11,2:14:38.74:281,39,0	1/1:5,5:10:14.81:102,15,0	1/1:16,3:19:56.26:399,56,0	1/1:15,3:18:53.87:442,54,0	1/1:14,4:18:53.45:401,53,0	1/1:5,0:5:14.91:113,15,0
chr10	25756654	.	A	AT	537.51	PASS	AC=38;AF=0.792;AN=48;BaseQRankSum=6.110;DP=153;FS=41.433;HRun=0;HaplotypeScore=27.2594;InbreedingCoeff=0.4936;MQ=104.10;MQ0=4;MQRankSum=-1.728;QD=13.44;ReadPosRankSum=-6.099;VQSLOD=0.6660;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	1/1:1,0:1:2.94:18,3,0	0/0:29,0:23:69.20:0,69,909	0/0:16,0:14:39.08:0,39,497	1/1:0,3:3:8.83:55,9,0	1/1:0,0:2:3.01:31,3,0	./.	0/0:47,0:47:99:0,141,1834	1/1:1,0:1:2.97:20,3,0	1/1:3,0:3:9:79,9,0	1/1:2,0:2:5.95:43,6,0	1/1:2,0:2:5.86:35,6,0	1/1:1,0:1:3:25,3,0	1/1:3,0:3:8.92:69,9,0	1/1:2,0:2:5.88:36,6,0	1/1:1,0:1:2.98:21,3,0	0/0:19,0:19:45.13:0,45,608	0/0:1,0:1:3:0,3,25	1/1:1,0:1:3:29,3,0	1/1:3,0:3:8.87:57,9,0	./.	1/1:0,1:4:3.01:33,3,0	1/1:2,0:2:5.88:36,6,0	1/1:1,0:1:2.92:17,3,0	1/1:1,0:1:2.92:17,3,0	1/1:2,0:2:5.96:46,6,0	1/1:0,5:5:2.96:20,3,0	./.
chr10	25757962	.	TA	T	8284.10	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=7.509;DP=432;FS=0.555;HRun=9;HaplotypeScore=40.7316;InbreedingCoeff=0.8825;MQ=63.15;MQ0=6;MQRankSum=0.908;QD=22.70;ReadPosRankSum=4.432;VQSLOD=5.0471;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,16:16:48.03:439,48,0	1/1:1,9:10:27.01:247,27,0	0/0:6,0:4:11.91:0,12,107	0/0:2,1:2:3.01:0,3,31	1/1:1,20:21:47.94:424,48,0	1/1:3,21:24:60.03:549,60,0	1/1:2,7:8:18.01:165,18,0	0/0:36,0:33:81.23:0,81,925	1/1:0,11:11:30.02:275,30,0	1/1:2,18:20:54.03:493,54,0	1/1:2,19:21:47.94:428,48,0	1/1:2,9:10:27.01:247,27,0	1/1:1,19:20:54.03:494,54,0	1/1:1,11:12:27.01:247,27,0	1/1:2,20:22:54.03:494,54,0	1/1:2,14:16:39.02:357,39,0	0/0:22,0:21:54.15:0,54,612	1/1:0,11:11:33.02:302,33,0	1/1:1,10:10:27:243,27,0	1/1:2,12:14:36.02:329,36,0	1/1:0,10:10:30.02:275,30,0	1/1:1,6:7:3.24:147,3,0	1/1:2,10:12:26.91:247,27,0	1/1:1,4:5:12.01:110,12,0	1/1:2,17:19:33.02:302,33,0	1/1:2,22:24:65.99:592,66,0	1/1:4,24:28:72.04:659,72,0	1/1:1,8:9:24.01:220,24,0
chr10	25759966	.	AC	A	7668.95	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=12.961;DP=600;FS=4.011;HRun=1;HaplotypeScore=175.3041;InbreedingCoeff=0.9888;MQ=69.46;MQ0=0;MQRankSum=-15.588;QD=17.75;ReadPosRankSum=0.532;VQSLOD=4.9887;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:90.21:0,90,1337	1/1:14,0:14:41.65:292,42,0	0/0:15,0:13:39.11:0,39,563	0/0:19,0:19:53.59:0,54,712	1/1:28,0:28:34.74:407,35,0	1/1:24,0:24:45.38:439,45,0	1/1:17,0:17:50.42:350,50,0	0/0:27,0:26:78.24:0,78,1179	1/1:21,0:21:56.53:406,57,0	1/1:22,0:22:40.28:359,40,0	1/1:22,0:22:47.37:330,47,0	1/1:20,0:20:53.58:392,54,0	1/1:23,0:23:65.48:481,65,0	1/1:19,1:20:47.70:353,48,0	0/0:40,0:40:99:0,105,1657	1/1:42,1:43:97.61:819,98,0	0/0:37,0:37:99:0,105,1618	1/1:5,0:5:11.77:73,12,0	1/1:24,1:25:51.48:404,51,0	1/1:28,0:28:74.11:511,74,0	1/1:13,0:13:23.63:158,24,0	1/1:17,1:18:50.46:381,50,0	1/1:13,0:13:23.74:166,24,0	1/1:16,0:16:27.38:215,27,0	1/1:18,0:18:50.60:358,51,0	1/1:19,0:19:50.14:346,50,0	1/1:18,0:18:50.25:334,50,0	1/1:5,0:5:14.76:98,15,0
chr10	25759967	.	CA	C	14597.11	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=9.612;DP=603;FS=4.054;HRun=2;HaplotypeScore=152.3914;InbreedingCoeff=0.9898;MQ=71.10;MQ0=0;MQRankSum=-15.782;QD=33.71;ReadPosRankSum=-0.116;VQSLOD=4.2537;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:90.21:0,90,1275	1/1:2,13:15:45.12:565,45,0	0/0:16,0:14:39.13:0,39,573	0/0:21,0:21:59.65:0,60,827	1/1:6,22:28:60.18:762,60,0	1/1:3,21:24:66.21:851,66,0	1/1:0,17:17:51.16:656,51,0	0/0:25,0:24:69.23:0,69,1035	1/1:2,19:21:57.18:734,57,0	1/1:2,21:23:60.19:774,60,0	1/1:4,18:22:48.15:616,48,0	1/1:0,20:20:54.17:695,54,0	1/1:2,21:23:66.21:853,66,0	1/1:2,17:19:51.15:645,51,0	0/0:40,0:40:99:0,108,1596	1/1:7,37:44:99:1577,123,0	0/0:37,0:37:99:0,105,1547	1/1:0,5:5:12.04:152,12,0	1/1:5,20:25:72.22:912,72,0	1/1:2,25:27:75.24:962,75,0	1/1:4,11:15:27.07:334,27,0	1/1:3,15:18:54.16:680,54,0	1/1:3,9:12:24.08:310,24,0	1/1:1,15:16:27.09:349,27,0	1/1:0,18:18:51.16:656,51,0	1/1:3,16:19:51.17:660,51,0	1/1:1,16:17:51.17:660,51,0	1/1:1,4:5:15.05:194,15,0
chr10	25761132	.	T	TC	848.41	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=-4.512;DP=606;FS=3.044;HRun=8;HaplotypeScore=96.2367;InbreedingCoeff=0.6569;MQ=79.67;MQ0=1;MQRankSum=-0.116;QD=17.31;ReadPosRankSum=-1.564;VQSLOD=3.2654;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:32.70:0,33,277	0/0:10,0:10:24.01:0,24,220	0/0:22,0:19:16.37:0,16,152	0/1:19,0:19:10.09:10,0,73	0/0:42,0:42:99:0,114,1024	0/0:27,0:27:72.02:0,72,653	0/0:18,0:18:50.99:0,51,453	0/0:17,0:17:29.98:0,30,265	0/0:21,0:21:57:0,57,513	0/0:18,0:18:42:0,42,377	0/0:26,0:26:72.02:0,72,653	0/0:22,0:22:60.02:0,60,549	0/0:30,0:30:40.33:0,40,635	0/0:26,0:26:74.81:0,75,662	1/1:7,22:29:84.22:941,84,0	0/0:24,0:24:69.04:0,69,631	0/0:17,0:17:44.76:0,45,382	0/0:9,0:9:24.01:0,24,220	0/0:13,0:13:23.98:0,24,212	0/0:33,0:33:92.99:0,93,841	0/0:17,0:17:45:0,45,404	0/0:17,0:17:42:0,42,380	0/0:19,0:19:41.17:0,41,351	0/0:22,0:22:63.01:0,63,571	0/0:25,0:25:60.01:0,60,544	0/0:33,0:33:71.38:0,71,800	0/0:27,0:27:77.98:0,78,695	0/0:6,0:6:18.01:0,18,165
chr10	25761314	.	G	GA	3142.30	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-12.712;DP=680;FS=0.812;HRun=9;HaplotypeScore=67.8946;InbreedingCoeff=0.9651;MQ=82.73;MQ0=1;MQRankSum=-0.255;QD=22.94;ReadPosRankSum=-1.923;VQSLOD=3.7467;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,30:32:66.18:730,66,0	0/0:5,0:5:8.99:0,9,78	0/0:30,0:30:36.53:0,37,391	0/0:13,0:13:19.78:0,20,157	0/0:29,0:29:61.40:0,61,631	0/0:28,0:28:71.97:0,72,621	0/0:26,0:26:71.97:0,72,621	1/1:5,33:37:99:1094,102,0	0/0:10,0:10:29.98:0,30,256	0/0:15,0:15:12.76:0,13,285	0/0:24,0:24:62.98:0,63,546	0/0:28,0:28:71.94:0,72,621	0/0:29,0:29:74.94:0,75,643	0/0:23,0:23:59.95:0,60,513	1/1:7,29:36:81.22:896,81,0	0/0:26,0:26:68.96:0,69,595	1/1:11,20:31:11.37:579,11,0	0/0:21,0:21:50.91:0,51,442	0/0:26,0:27:65:0,65,547	0/0:18,0:18:44.99:0,45,391	0/0:19,0:18:47.99:0,48,417	0/0:18,0:18:41.97:0,42,364	0/0:24,0:24:62.93:0,63,536	0/0:21,0:21:40.07:0,40,447	0/0:23,0:23:62.97:0,63,544	0/0:29,0:29:74.66:0,75,629	0/0:38,0:37:95.95:0,96,829	0/0:19,0:19:53.99:0,54,469
chr10	25761514	.	G	GA	1042.28	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-0.980;DP=754;FS=14.168;HRun=5;HaplotypeScore=80.7469;InbreedingCoeff=0.9993;MQ=85.68;MQ0=0;MQRankSum=-2.244;QD=30.66;ReadPosRankSum=2.417;VQSLOD=3.0461;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,123,1320	0/0:13,0:13:36.07:0,36,377	0/0:30,0:29:71.86:0,72,697	0/0:23,0:23:30.11:0,30,392	0/0:28,0:27:81.19:0,81,862	0/0:23,0:24:65.83:0,66,687	0/0:17,0:17:48.10:0,48,507	0/0:32,0:32:81.01:0,81,833	0/0:27,0:27:75.18:0,75,805	0/0:28,0:28:81.19:0,81,860	0/0:26,0:26:75.99:0,76,761	0/0:31,0:31:87.20:0,87,926	0/0:25,0:25:72.18:0,72,772	0/0:24,0:24:63.16:0,63,676	1/1:1,31:34:87.28:1137,87,0	0/0:34,0:34:96.23:0,96,1024	0/0:23,0:23:66.16:0,66,702	0/0:16,0:16:42.10:0,42,450	0/0:26,0:26:62.96:0,63,649	0/0:38,0:38:99:0,102,1078	0/0:34,0:34:90.21:0,90,959	0/0:23,0:23:63.14:0,63,662	0/0:22,0:22:45.11:0,45,482	0/0:26,0:26:72.15:0,72,757	0/0:21,0:21:57.13:0,57,606	0/0:21,0:21:48.12:0,48,515	0/0:44,0:44:99:0,126,1313	0/0:21,0:21:63.16:0,63,676
chr10	25764719	.	CA	C	1564.29	PASS	AB=0.917;AC=7;AF=0.125;AN=56;BaseQRankSum=-0.719;DP=618;FS=0.485;HRun=9;HaplotypeScore=102.0260;InbreedingCoeff=0.8087;MQ=68.92;MQ0=1;MQRankSum=0.490;QD=14.90;ReadPosRankSum=-0.555;VQSLOD=3.5141;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:96.24:0,96,1074	0/0:7,0:7:18:0,18,192	0/1:30,3:27:28.96:29,0,342	0/0:29,0:23:24.23:0,24,427	0/0:32,0:32:78.23:0,78,899	0/0:21,0:21:51.11:0,51,569	0/0:14,0:14:42.11:0,42,472	1/1:4,20:24:62.52:567,63,0	0/0:13,0:13:30.07:0,30,336	0/0:21,0:21:54.15:0,54,616	0/0:17,0:17:45.13:0,45,519	0/0:31,0:31:87.20:0,87,969	0/0:27,0:27:75.10:0,75,863	0/0:25,1:26:42.36:0,42,716	1/1:7,13:20:53.99:486,54,0	0/0:20,0:20:51.15:0,51,588	1/1:7,21:27:69.04:631,69,0	0/0:21,0:21:54.16:0,54,623	0/0:18,0:18:51.14:0,51,581	0/0:29,0:29:63.19:0,63,727	0/0:16,0:16:42.12:0,42,485	0/0:21,0:21:54.16:0,54,623	0/0:29,0:29:78.22:0,78,889	0/0:26,0:26:66.15:0,66,727	0/0:16,0:16:45.12:0,45,509	0/0:14,1:15:11.64:0,12,373	0/0:15,0:15:42.12:0,42,475	0/0:11,1:12:8.80:0,9,336
chr10	25764776	.	TC	T	19911.20	PASS	AB=0.674;AC=54;AF=0.964;AN=56;BaseQRankSum=-3.837;DP=519;FS=0.000;HRun=1;HaplotypeScore=74.7572;InbreedingCoeff=-0.0371;MQ=68.67;MQ0=0;MQRankSum=-4.073;QD=38.36;ReadPosRankSum=3.546;VQSLOD=5.3876;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,24:24:72.14:961,72,0	1/1:0,8:8:24.08:335,24,0	0/1:3,8:11:70.63:258,0,71	0/1:7,3:9:89.48:111,0,89	1/1:0,36:36:87.04:1215,87,0	1/1:0,20:20:54.14:732,54,0	1/1:0,19:19:54.18:755,54,0	1/1:0,26:26:75.25:1048,75,0	1/1:0,14:14:39.10:524,39,0	1/1:1,25:26:78.25:1073,78,0	1/1:0,26:26:72.11:940,72,0	1/1:0,18:18:54.15:733,54,0	1/1:0,22:22:63.17:857,63,0	1/1:0,17:17:48.16:670,48,0	1/1:0,12:12:36.03:459,36,0	1/1:0,18:18:51.17:713,51,0	1/1:2,13:15:42.03:523,42,0	1/1:1,11:12:33.11:461,33,0	1/1:0,17:17:51.17:713,51,0	1/1:0,28:28:84.24:1152,84,0	1/1:0,14:14:42.14:587,42,0	1/1:0,19:19:54.14:733,54,0	1/1:0,24:24:69.19:942,69,0	1/1:0,14:14:42.10:565,42,0	1/1:0,19:19:57.19:797,57,0	1/1:0,21:21:60.20:838,60,0	1/1:0,18:18:54.18:754,54,0	1/1:0,11:11:33.11:461,33,0
chr10	25765416	.	C	CA	4764.23	PASS	AB=0.524;AC=5;AF=0.089;AN=56;BaseQRankSum=5.431;DP=744;FS=4.059;HRun=0;HaplotypeScore=76.9095;InbreedingCoeff=0.7797;MQ=86.32;MQ0=0;MQRankSum=-0.395;QD=44.11;ReadPosRankSum=-0.714;VQSLOD=4.9408;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,120,1641	0/0:16,0:16:48.16:0,48,671	0/0:18,0:18:51.16:0,51,697	0/0:31,0:31:87.05:0,87,1117	0/0:36,0:36:99:0,105,1451	0/0:29,0:29:87.29:0,87,1215	0/0:36,0:36:99:0,108,1490	1/1:2,40:42:99:1913,123,0	0/0:30,0:30:90.28:0,90,1239	0/0:25,0:25:75.25:0,75,1047	0/0:19,0:19:54.17:0,54,735	0/0:37,0:37:99:0,111,1534	0/0:30,0:30:90.29:0,90,1241	0/0:27,0:27:78.26:0,78,1087	1/1:2,42:44:99:2003,126,0	0/0:32,0:32:90.30:0,90,1256	0/1:2,20:22:20.71:848,0,21	0/0:7,0:7:18.06:0,18,252	0/0:25,0:25:66.21:0,66,907	0/0:21,0:21:57.19:0,57,796	0/0:20,0:20:60.20:0,60,839	0/0:22,0:22:66.22:0,66,923	0/0:30,0:30:90.29:0,90,1242	0/0:13,0:13:39.13:0,39,537	0/0:23,0:22:69.23:0,69,965	0/0:25,0:25:75.25:0,75,1046	0/0:30,0:30:90.22:0,90,1199	0/0:11,0:11:33.11:0,33,462
chr10	25766147	.	AG	A	19392.29	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-3.880;DP=738;FS=5.959;HRun=2;HaplotypeScore=81.9598;InbreedingCoeff=0.9996;MQ=88.42;MQ0=0;MQRankSum=-5.843;QD=35.85;ReadPosRankSum=3.606;VQSLOD=5.4524;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,111,1641	1/1:0,11:11:30.10:390,30,0	0/0:24,0:24:72.22:0,72,1021	0/0:27,0:27:72.22:0,72,1044	1/1:1,21:22:63.20:818,63,0	1/1:0,21:21:60.20:779,60,0	1/1:1,21:22:54.18:701,54,0	0/0:43,0:43:99:0,126,1850	1/1:0,25:25:72.23:935,72,0	1/1:1,25:26:72.22:935,72,0	1/1:0,15:15:42.14:545,42,0	1/1:0,38:38:99:1402,108,0	1/1:0,31:31:87.28:1130,87,0	1/1:0,36:36:99:1285,99,0	0/0:42,0:42:99:0,126,1885	1/1:0,36:36:99:1325,102,0	0/0:24,0:24:72.24:0,72,1079	1/1:1,23:24:66.21:857,66,0	1/1:0,20:20:60.19:777,60,0	1/1:2,19:21:48.16:623,48,0	1/1:0,64:64:99:2182,169,0	1/1:0,23:23:69.22:892,69,0	1/1:0,9:9:27.09:351,27,0	1/1:0,19:19:57.19:740,57,0	1/1:0,23:23:63.20:818,63,0	1/1:0,21:21:63.20:818,63,0	1/1:0,23:23:54.18:700,54,0	1/1:0,11:11:30.10:390,30,0
chr10	25766246	.	CT	C	4529.87	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=16.184;DP=879;FS=4.290;HRun=2;HaplotypeScore=91.6922;InbreedingCoeff=0.9999;MQ=88.51;MQ0=0;MQRankSum=-2.328;QD=36.83;ReadPosRankSum=0.273;VQSLOD=5.1208;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,129,1910	0/0:14,0:14:42.14:0,42,627	0/0:33,0:33:96.32:0,96,1393	0/0:29,0:29:81.20:0,81,1147	0/0:37,0:37:99:0,105,1572	0/0:31,0:31:93.31:0,93,1374	0/0:32,0:32:96.27:0,96,1357	1/1:3,30:33:93.26:1187,93,0	0/0:29,0:29:87.29:0,87,1304	0/0:27,0:27:81.27:0,81,1214	0/0:12,0:12:36.12:0,36,536	0/0:50,0:50:99:0,150,2205	0/0:30,0:30:90.30:0,90,1345	0/0:42,0:42:99:0,120,1794	1/1:1,60:61:99:2213,172,0	0/0:59,0:59:99:0,175,2587	1/1:0,29:29:87.28:1129,87,0	0/0:21,0:21:60.20:0,60,899	0/0:23,0:23:69.20:0,69,978	0/0:25,0:25:75.25:0,75,1106	0/0:51,0:51:99:0,153,2249	0/0:25,0:25:75.23:0,75,1076	0/0:13,0:13:39.13:0,39,582	0/0:23,0:23:69.23:0,69,1033	0/0:25,0:25:75.25:0,75,1121	0/0:28,0:28:84.28:0,84,1235	0/0:35,0:35:99:0,102,1529	0/0:18,0:18:48.16:0,48,719
chr10	25766768	.	G	GAGGATTTATCAC	15333.49	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=5.527;DP=796;FS=0.828;HRun=0;HaplotypeScore=264.5106;InbreedingCoeff=0.9935;MQ=84.49;MQ0=0;MQRankSum=-15.357;QD=147.44;ReadPosRankSum=-1.621;VQSLOD=4.7332;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,102,3686	0/0:6,0:6:18.05:0,18,524	0/0:19,0:19:45.15:0,45,1597	0/0:32,0:32:78.17:0,78,2146	0/0:35,0:35:99:0,102,3390	0/0:31,0:31:93.30:0,93,3147	0/0:25,0:25:75.23:0,75,2594	1/1:35,6:42:99:5663,111,0	0/0:20,0:20:54.17:0,54,1881	0/0:28,0:28:72.25:0,72,2541	0/0:27,0:27:75.22:0,75,2442	0/0:40,0:40:99:0,114,4098	0/0:36,0:36:99:0,102,3600	0/0:27,0:27:81.28:0,81,2943	1/1:17,28:47:99:7289,129,0	0/0:39,0:38:99:0,117,4295	1/1:7,6:15:42.14:2382,42,0	0/0:6,0:6:18.06:0,18,677	0/0:21,0:21:57.17:0,57,1810	0/0:28,0:28:81.28:0,81,2815	0/0:48,0:48:99:0,132,4686	0/0:20,0:20:57.20:0,57,1876	0/0:25,0:25:75.22:0,75,2459	0/0:35,0:35:99:0,105,3796	0/0:33,0:32:99:0,99,3418	0/0:26,0:26:75.25:0,75,2602	0/0:40,0:40:99:0,117,4097	0/0:10,0:10:24.08:0,24,903
chr10	25767244	.	G	GT	3856.93	PASS	AB=0.929;AC=7;AF=0.125;AN=56;BaseQRankSum=-11.735;DP=536;FS=2.624;HRun=0;HaplotypeScore=65.1342;InbreedingCoeff=0.8445;MQ=73.76;MQ0=0;MQRankSum=0.032;QD=39.36;ReadPosRankSum=1.146;VQSLOD=4.0886;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,105,1379	0/0:5,0:5:15.05:0,15,210	0/0:16,0:15:42.13:0,42,569	0/0:10,0:10:30.02:0,30,368	0/0:20,0:20:48.10:0,48,598	0/0:22,0:22:60.16:0,60,784	0/0:21,0:21:63.19:0,63,863	1/1:2,31:32:96.31:1498,96,0	0/0:15,0:15:42.14:0,42,587	0/0:19,0:19:51.14:0,51,642	0/0:17,0:17:48.03:0,48,569	0/0:26,0:26:78.25:0,78,1073	0/0:17,0:17:45.14:0,45,611	0/0:26,0:26:72.23:0,72,987	1/1:0,25:25:69.24:1103,69,0	0/0:13,0:13:39.12:0,39,528	1/1:0,27:27:78.27:1247,78,0	0/1:12,1:13:8.74:9,0,444	0/0:14,0:14:39.12:0,39,528	0/0:19,0:19:54.15:0,54,721	0/0:16,0:16:45.15:0,45,629	0/0:5,0:5:15.04:0,15,193	0/0:16,0:16:45.03:0,45,505	0/0:9,0:9:27.09:0,27,378	0/0:23,0:23:69.19:0,69,914	0/0:30,0:30:81.22:0,81,1029	0/0:25,0:24:66.22:0,66,921	0/0:18,0:18:54.18:0,54,755
chr10	25767480	.	CTTAGTT	C	17406.93	PASS	AC=44;AF=0.815;AN=54;BaseQRankSum=9.945;DP=471;FS=10.669;HRun=0;HaplotypeScore=113.8339;InbreedingCoeff=0.9358;MQ=71.99;MQ0=0;MQRankSum=-12.535;QD=48.22;ReadPosRankSum=4.797;VQSLOD=4.4903;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,17:21:48.16:1040,48,0	1/1:1,4:5:5.92:134,6,0	0/0:14,0:14:30.10:0,30,837	0/0:14,0:14:19.52:0,20,689	1/1:5,20:25:51.17:1105,51,0	1/1:4,17:21:45.15:1003,45,0	1/1:3,9:12:18.06:401,18,0	0/0:33,0:33:84.29:0,84,2667	1/1:3,11:14:30.10:669,30,0	1/1:0,19:19:57.19:1168,57,0	1/1:3,11:14:30.10:630,30,0	1/1:3,10:13:18.06:401,18,0	1/1:4,14:18:39.13:869,39,0	1/1:1,13:14:36.12:803,36,0	0/0:21,0:21:57.20:0,57,1929	1/1:2,25:27:66.23:1471,66,0	0/0:25,0:25:72.25:0,72,2422	1/1:1,6:7:15.05:334,15,0	1/1:4,8:12:27.09:573,27,0	1/1:6,16:22:45.15:973,45,0	1/1:3,5:8:6.02:104,6,0	1/1:0,10:10:24.08:535,24,0	1/1:2,20:22:54.18:1140,54,0	./.	1/1:1,25:26:69.24:1537,69,0	1/1:5,15:20:45.14:905,45,0	1/1:3,22:25:63.22:1404,63,0	1/1:0,6:6:12.04:208,12,0
chr10	25769226	.	T	TGCCC	8550.17	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-14.623;DP=813;FS=11.888;HRun=0;HaplotypeScore=161.5457;InbreedingCoeff=0.9996;MQ=86.24;MQ0=0;MQRankSum=-9.858;QD=60.21;ReadPosRankSum=-1.140;VQSLOD=5.8536;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,37:45:99:2537,102,0	0/0:11,0:11:33.11:0,33,607	0/0:30,0:30:71.38:0,71,1265	0/0:26,0:26:54.10:0,54,833	0/0:29,0:29:81.27:0,81,1475	0/0:17,0:17:51.17:0,51,935	0/0:22,0:22:60.21:0,60,1102	1/1:8,14:24:60.13:1439,60,0	0/0:22,0:22:66.23:0,66,1205	0/0:26,0:26:72.25:0,72,1341	0/0:17,0:17:51.17:0,51,951	0/0:55,0:55:99:0,163,3015	0/0:35,0:35:96.33:0,96,1788	0/0:48,0:48:99:0,129,2337	1/1:3,33:39:99:2590,99,0	0/0:48,0:48:99:0,129,2347	1/1:4,29:34:78.26:1984,78,0	0/0:22,0:22:63.19:0,63,1112	0/0:15,0:15:42.14:0,42,778	0/0:13,0:13:33.11:0,33,616	0/0:35,0:35:99:0,99,1837	0/0:37,0:37:99:0,111,2010	0/0:16,0:16:45.13:0,45,778	0/0:38,0:38:99:0,102,1843	0/0:17,0:17:51.17:0,51,916	0/0:39,0:39:99:0,111,2051	0/0:44,0:43:99:0,126,2351	0/0:9,0:9:27.09:0,27,504
chr10	25772106	.	CA	C	503.66	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.063;DP=645;FS=0.840;HRun=2;HaplotypeScore=60.9571;InbreedingCoeff=0.9896;MQ=86.12;MQ0=0;MQRankSum=-2.015;QD=27.98;ReadPosRankSum=-1.657;VQSLOD=2.8102;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,16:18:50.99:599,51,0	0/0:8,0:8:24.07:0,24,335	0/0:25,0:25:65.33:0,65,869	0/0:19,0:19:50.27:0,50,653	0/0:21,0:21:60.20:0,60,887	0/0:24,0:24:69.22:0,69,1001	0/0:15,0:15:45.14:0,45,646	0/0:34,0:34:99:0,99,1398	0/0:25,0:25:72.24:0,72,1061	0/0:37,0:37:99:0,108,1599	0/0:23,0:23:69.21:0,69,983	0/0:24,0:24:72.22:0,72,1029	0/0:31,0:31:84.28:0,84,1225	0/0:35,0:35:61.58:0,62,1347	0/0:25,0:25:75.23:0,75,1070	0/0:27,0:27:78.25:0,78,1135	0/0:24,0:24:69.23:0,69,1021	0/0:22,0:22:60.16:0,60,844	0/0:20,0:20:60.19:0,60,867	0/0:32,0:32:93.29:0,93,1337	0/0:12,0:12:33.08:0,33,448	0/0:16,0:16:48.15:0,48,690	0/0:25,0:25:72.24:0,72,1056	0/0:12,0:12:36.11:0,36,514	0/0:13,0:13:39.07:0,39,497	0/0:34,0:34:99:0,102,1459	0/0:38,0:36:99:0,114,1650	0/0:6,0:6:18.06:0,18,266
chr10	25772158	.	TATC	T	975.70	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.467;DP=665;FS=5.585;HRun=0;HaplotypeScore=97.9489;InbreedingCoeff=0.9986;MQ=76.15;MQ0=0;MQRankSum=-4.661;QD=36.14;ReadPosRankSum=2.948;VQSLOD=4.5999;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,25:27:63.22:1071,63,0	0/0:11,0:11:33.11:0,33,741	0/0:16,0:16:48:0,48,805	0/0:10,0:10:27.07:0,27,526	0/0:30,0:30:90.23:0,90,1819	0/0:22,0:22:63.20:0,63,1390	0/0:15,0:15:45.14:0,45,993	0/0:42,0:42:99:0,126,2587	0/0:17,0:17:48.16:0,48,1069	0/0:37,0:37:99:0,111,2462	0/0:28,0:28:75.26:0,75,1724	0/0:29,0:29:87.27:0,87,1898	0/0:29,0:29:78.23:0,78,1663	0/0:22,0:22:60.16:0,60,1225	0/0:22,0:22:66.21:0,66,1477	0/0:28,0:28:84.27:0,84,1872	0/0:28,0:28:81.28:0,81,1865	0/0:24,0:24:72.19:0,72,1563	0/0:16,0:16:48.15:0,48,1020	0/0:38,0:38:99:0,114,2499	0/0:13,0:13:39.13:0,39,898	0/0:26,0:26:75.24:0,75,1652	0/0:18,0:18:54.15:0,54,1136	0/0:15,0:15:45.15:0,45,1015	0/0:25,0:25:75.24:0,75,1685	0/0:30,0:30:90.30:0,90,1990	0/0:31,0:30:84.27:0,84,1840	0/0:16,0:16:48.16:0,48,1086
chr10	25772991	.	C	CT	4151.85	PASS	AB=1.000;AC=41;AF=0.732;AN=56;BaseQRankSum=9.297;DP=353;FS=1.052;HRun=11;HaplotypeScore=167.2827;InbreedingCoeff=0.6111;MQ=59.21;MQ0=5;MQRankSum=-7.157;QD=17.90;ReadPosRankSum=-1.781;VQSLOD=2.0852;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:23:46.98:0,47,349	1/1:1,2:3:3.01:30,3,0	0/1:10,0:7:0.68:1,0,59	0/0:13,0:7:5.87:0,6,37	1/1:8,3:11:15.33:136,15,0	1/1:13,0:13:29.90:288,30,0	1/1:12,0:12:20.82:179,21,0	0/0:21,0:21:32.97:0,33,225	1/1:13,0:13:27.01:257,27,0	1/1:17,2:19:27.99:457,28,0	1/1:8,2:10:14.18:139,14,0	1/1:7,5:12:20.98:200,21,0	1/1:19,0:19:53.89:488,54,0	1/1:11,0:11:30.04:293,30,0	0/0:30,0:30:62.59:0,63,479	1/1:11,3:14:7.72:252,8,0	0/0:25,1:26:35.23:0,35,453	1/1:3,0:3:5.98:51,6,0	1/1:11,0:11:3.94:220,4,0	0/1:11,0:11:29.48:76,0,29	0/0:3,1:4:2.47:0,2,9	1/1:4,3:8:9.49:92,9,0	1/1:12,0:12:24.02:232,24,0	1/1:4,0:4:3:25,3,0	1/1:10,0:10:27.04:265,27,0	0/1:6,0:6:8.12:107,0,8	1/1:8,3:11:18.03:181,18,0	1/1:9,0:9:18.04:183,18,0
chr10	25773064	.	GGATCTCAATACAGATGGTCGT	G	1962.79	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.684;DP=643;FS=8.654;HRun=0;HaplotypeScore=339.6356;InbreedingCoeff=0.9988;MQ=68.45;MQ0=3;MQRankSum=-5.413;QD=109.04;ReadPosRankSum=1.213;VQSLOD=2.3237;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,14:18:36.12:2058,36,0	0/0:9,0:9:27.09:0,27,2389	0/0:26,0:21:57.20:0,57,3371	0/0:21,0:19:54.11:0,54,2987	0/0:25,0:25:69.24:0,69,6397	0/0:25,0:25:66.23:0,66,6147	0/0:26,0:26:75.26:0,75,6447	0/0:22,0:22:66.23:0,66,5182	0/0:19,0:19:51.17:0,51,4848	0/0:30,0:30:87.30:0,87,6848	0/0:15,0:15:45.15:0,45,3828	0/0:27,0:27:81.28:0,81,7146	0/0:29,0:29:75.26:0,75,6282	0/0:29,0:29:84.29:0,84,8010	0/0:23,0:23:69.24:0,69,5980	0/0:32,0:32:90.31:0,90,7962	0/0:26,0:26:78.27:0,78,7278	0/0:20,0:20:57.20:0,57,5444	0/0:24,0:24:69.20:0,69,5071	0/0:22,0:22:57.20:0,57,5133	0/0:23,0:23:69.24:0,69,5665	0/0:18,0:18:51.18:0,51,4585	0/0:28,0:28:69.24:0,69,6452	0/0:21,0:21:59.95:0,60,5763	0/0:25,0:24:72.25:0,72,6710	0/0:19,0:19:51.18:0,51,5048	0/0:23,0:23:60.21:0,60,5765	0/0:18,0:18:51.13:0,51,4003
chr10	25774160	.	A	ATCTGTCAGTTTT	47526.15	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-11.414;DP=624;FS=41.708;HRun=0;HaplotypeScore=149.2510;InbreedingCoeff=0.9586;MQ=82.60;MQ0=0;MQRankSum=-16.113;QD=108.76;ReadPosRankSum=2.102;VQSLOD=3.2345;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,105,3817	1/1:0,5:5:12.04:737,12,0	0/0:32,0:32:90.10:0,90,2576	0/0:18,0:18:54.14:0,54,1661	1/1:5,15:26:54.15:2685,54,0	1/1:3,7:13:12.04:733,12,0	1/1:5,14:23:36.12:2155,36,0	0/0:31,0:31:84.23:0,84,2678	1/1:4,16:24:45.15:2744,45,0	1/1:3,11:15:45.05:2252,45,0	1/1:5,11:19:45.15:2244,45,0	1/1:3,29:41:90.31:5481,90,0	1/1:2,18:24:51.18:3044,51,0	1/1:5,6:19:24.08:1327,24,0	0/0:38,0:38:99:0,108,3827	1/1:2,24:32:66.23:4054,66,0	0/0:31,0:31:93.28:0,93,3049	1/1:3,7:16:18.53:1108,19,0	1/1:5,7:14:33.07:1612,33,0	1/1:4,16:25:60.21:3364,60,0	1/1:1,3:8:6.02:369,6,0	1/1:1,11:17:33.07:1706,33,0	1/1:5,7:15:27.09:1478,27,0	1/1:6,15:27:42.14:2241,42,0	1/1:1,11:20:27.09:1630,27,0	1/1:2,18:26:72.06:3524,72,0	1/1:5,15:23:45.15:2334,45,0	1/1:2,2:4:12.04:707,12,0
chr10	25774348	.	TGAATA	T	12034.11	PASS	AB=0.674;AC=22;AF=0.393;AN=56;BaseQRankSum=10.205;DP=551;FS=30.047;HRun=0;HaplotypeScore=178.5706;InbreedingCoeff=-0.6471;MQ=71.30;MQ0=2;MQRankSum=-14.575;QD=29.21;ReadPosRankSum=-2.283;VQSLOD=2.6691;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:60.21:0,60,1856	0/1:3,4:7:99:173,0,171	0/0:32,0:28:78.25:0,78,2147	0/0:23,0:21:38.57:0,39,1116	0/1:10,8:18:99:440,0,682	0/1:6,15:21:99:887,0,153	0/1:13,10:23:99:517,0,957	0/0:26,0:26:75.26:0,75,2325	0/1:4,13:17:99:768,0,154	0/1:8,7:14:99:401,0,474	0/1:11,6:16:99:419,0,451	0/1:14,17:31:99:938,0,378	0/1:8,17:25:99:941,0,381	0/1:5,13:18:99:758,0,316	0/0:22,0:22:63.22:0,63,1909	0/1:11,26:37:99:1687,0,448	0/0:16,0:16:48.16:0,48,1482	0/1:10,7:17:99:401,0,449	0/1:14,2:14:86.76:87,0,854	0/1:10,7:17:99:413,0,577	0/1:17,8:22:99:314,0,840	0/1:11,5:16:99:218,0,614	0/1:6,4:10:99:223,0,435	0/1:13,13:26:99:345,0,497	0/1:7,7:14:99:469,0,204	0/1:7,7:14:99:404,0,362	0/1:5,17:22:99:1120,0,122	0/1:3,2:5:99:111,0,263
chr10	25774410	.	GT	G	12466.11	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=11.071;DP=638;FS=1.206;HRun=8;HaplotypeScore=102.2737;InbreedingCoeff=0.9966;MQ=77.04;MQ0=0;MQRankSum=-8.321;QD=25.03;ReadPosRankSum=3.609;VQSLOD=4.9006;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:72.18:0,72,848	1/1:1,10:11:30.05:289,30,0	0/0:15,0:15:39.11:0,39,449	0/0:20,0:20:45.08:0,45,486	1/1:1,21:22:57.09:550,57,0	1/1:2,30:32:90.14:866,90,0	1/1:2,23:25:63.10:607,63,0	0/0:26,0:26:69.19:0,69,811	1/1:0,20:20:54.08:519,54,0	1/1:1,22:23:66.04:618,66,0	1/1:0,19:19:51.08:492,51,0	1/1:3,38:41:99:1040,108,0	1/1:0,25:25:63.10:607,63,0	1/1:1,36:37:90.14:864,90,0	0/0:33,0:33:96.29:0,96,1160	1/1:4,36:40:99:954,99,0	0/0:17,0:17:51.14:0,51,605	1/1:1,13:14:36.06:347,36,0	1/1:1,14:15:42.07:405,42,0	1/1:0,26:26:63.09:608,63,0	1/1:2,22:23:54.08:521,54,0	1/1:1,16:17:45.06:433,45,0	1/1:1,24:25:66.10:634,66,0	1/1:0,20:20:51.08:491,51,0	1/1:1,12:13:36.05:347,36,0	1/1:1,20:21:57.09:549,57,0	1/1:0,23:23:60.09:579,60,0	1/1:0,5:5:15.02:145,15,0
chr10	25774703	.	C	CTCAG	39424.65	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=13.848;DP=958;FS=4.263;HRun=0;HaplotypeScore=186.0320;InbreedingCoeff=0.9872;MQ=74.42;MQ0=1;MQRankSum=-5.052;QD=51.40;ReadPosRankSum=4.575;VQSLOD=5.7090;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,135,2287	1/1:1,8:10:21.07:532,21,0	0/0:16,0:16:33.09:0,33,500	0/0:24,0:24:57.11:0,57,887	1/1:11,29:40:69.23:1706,69,0	1/1:5,24:29:57.20:1447,57,0	1/1:10,34:46:75.73:1878,76,0	0/0:26,0:26:63.20:0,63,1057	1/1:6,24:31:63.22:1599,63,0	1/1:5,27:33:93.30:2264,93,0	1/1:3,12:15:27.09:684,27,0	1/1:10,44:55:99:2967,117,0	1/1:8,49:60:99:3246,129,0	1/1:11,52:63:99:3340,132,0	0/0:50,0:50:99:0,138,2272	1/1:10,50:60:99:3345,132,0	0/0:28,0:28:78.18:0,78,1294	1/1:0,23:23:57.20:1447,57,0	1/1:7,20:27:63.65:1452,64,0	1/1:3,17:21:45.15:1140,45,0	1/1:18,53:72:99:3385,136,0	1/1:6,18:27:39.12:971,39,0	1/1:6,22:29:66.22:1586,66,0	1/1:6,24:30:66.23:1656,66,0	1/1:7,13:19:33.11:838,33,0	1/1:11,18:30:56.25:1635,56,0	1/1:10,31:42:84.29:2077,84,0	1/1:1,3:4:9.03:229,9,0
chr10	25775208	.	T	TGCATA	38204.84	PASS	AB=0.600;AC=43;AF=0.768;AN=56;BaseQRankSum=12.625;DP=608;FS=0.000;HRun=0;HaplotypeScore=126.5752;InbreedingCoeff=0.8887;MQ=63.25;MQ0=0;MQRankSum=-15.928;QD=79.76;ReadPosRankSum=5.101;VQSLOD=6.7057;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:36.12:0,36,839	1/1:1,15:16:45.15:1493,45,0	0/0:18,0:17:29.30:0,29,847	0/0:10,0:10:29.99:0,30,549	1/1:8,18:32:51.18:1690,51,0	1/1:5,10:18:33.11:1095,33,0	1/1:3,11:14:30.10:995,30,0	0/0:40,0:40:99:0,117,2631	1/1:2,21:25:66.23:2188,66,0	1/1:5,26:38:99:3142,105,0	1/1:1,13:18:39.13:1276,39,0	1/1:0,23:25:69.24:2284,69,0	1/1:3,12:17:42.14:1393,42,0	1/1:5,25:31:78.27:2586,78,0	0/0:37,0:37:99:0,111,2518	1/1:4,30:36:93.32:3025,93,0	0/0:12,0:12:36.12:0,36,839	0/1:2,4:6:51.86:480,0,52	1/1:5,8:15:45.14:1384,45,0	1/1:6,25:32:78.27:2588,78,0	1/1:1,4:6:9.03:298,9,0	1/1:1,18:23:63.22:2083,63,0	1/1:4,17:23:48.16:1588,48,0	1/1:3,10:13:27.09:861,27,0	1/1:1,17:21:45.15:1492,45,0	1/1:5,16:24:75.24:2190,75,0	1/1:4,21:24:66.23:2181,66,0	1/1:0,18:19:57.20:1893,57,0
chr10	25775210	.	A	ATC	2669.49	PASS	AB=1.000;AC=43;AF=0.768;AN=56;BaseQRankSum=16.758;DP=618;FS=0.740;HRun=0;HaplotypeScore=231.7986;InbreedingCoeff=0.7676;MQ=64.18;MQ0=0;MQRankSum=-16.892;QD=5.45;ReadPosRankSum=7.716;VQSLOD=2.4674;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:36.12:0,36,587	1/1:17,0:17:36.08:124,36,0	0/0:18,0:18:46.04:0,46,714	0/0:11,0:11:30.02:0,30,386	1/1:31,2:33:18.88:154,19,0	1/1:17,0:17:28.47:107,28,0	1/1:14,0:14:23.38:77,23,0	0/0:38,0:38:99:0,114,1813	1/1:23,0:23:51.23:169,51,0	1/1:35,0:35:5.45:128,5,0	1/1:20,2:22:8.56:105,9,0	1/1:24,0:24:55.12:192,55,0	1/1:17,0:17:10.41:81,10,0	1/1:34,0:34:2.04:153,2,0	0/0:36,0:36:99:0,108,1735	1/1:36,0:36:51.59:225,52,0	0/0:12,0:12:36.12:0,36,587	0/1:7,0:7:12.51:13,0,53	1/1:15,0:15:24.85:69,25,0	1/1:33,1:34:65.15:247,65,0	1/1:6,0:6:6.96:23,7,0	1/1:22,3:25:52.79:234,53,0	1/1:25,0:25:42.87:165,43,0	1/1:13,0:13:21.64:75,22,0	1/1:22,0:22:12.24:91,12,0	1/1:25,0:24:45.91:176,46,0	1/1:25,0:23:32.94:148,33,0	1/1:20,0:21:0.04:103,0,0
chr10	25775899	.	CG	C	22508.04	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=9.810;DP=792;FS=4.410;HRun=1;HaplotypeScore=93.6620;InbreedingCoeff=0.9932;MQ=84.56;MQ0=0;MQRankSum=-2.239;QD=38.54;ReadPosRankSum=4.500;VQSLOD=5.2755;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,146,2341	1/1:0,9:9:21.07:294,21,0	0/0:23,0:23:69.24:0,69,1102	0/0:25,0:25:57.25:0,57,993	1/1:0,30:30:81.23:1110,81,0	1/1:0,17:17:48.16:671,48,0	1/1:0,18:18:45.15:629,45,0	0/0:28,0:28:81.26:0,81,1251	1/1:0,24:24:60.20:839,60,0	1/1:0,19:19:57.18:780,57,0	1/1:0,20:20:57.19:788,57,0	1/1:0,37:37:96.32:1338,96,0	1/1:0,48:48:99:1803,129,0	1/1:0,44:44:99:1803,129,0	0/0:54,0:54:99:0,163,2526	1/1:0,52:52:99:2007,144,0	0/0:27,0:27:78.25:0,78,1219	1/1:1,20:21:12.23:749,12,0	1/1:0,23:23:69.21:931,69,0	1/1:0,27:27:78.26:1091,78,0	1/1:0,33:33:90.30:1258,90,0	1/1:0,21:21:56.89:797,57,0	1/1:0,24:24:66.22:923,66,0	1/1:0,25:25:72.24:1007,72,0	1/1:0,18:18:48.16:671,48,0	1/1:0,22:22:66.22:923,66,0	1/1:0,38:38:99:1509,108,0	1/1:0,14:14:42.14:587,42,0
chr10	25776089	.	GTT	G	10150.45	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=0.970;DP=641;FS=8.244;HRun=14;HaplotypeScore=90.4131;InbreedingCoeff=0.9648;MQ=66.01;MQ0=6;MQRankSum=-1.779;QD=17.97;ReadPosRankSum=5.939;VQSLOD=3.7755;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:27:57.18:0,57,771	1/1:3,8:12:12.27:154,12,0	0/0:36,0:18:28.27:0,28,279	0/0:13,0:7:8.89:0,9,92	1/1:4,14:18:38.39:357,38,0	1/1:3,17:20:42.02:431,42,0	1/1:4,12:17:32.72:289,33,0	1/1:8,0:25:21.08:178,21,0	1/1:2,13:15:36.03:333,36,0	1/1:2,10:12:29.98:270,30,0	1/1:4,11:15:29.82:285,30,0	1/1:6,29:34:78.05:722,78,0	1/1:5,24:29:71.87:653,72,0	1/1:8,20:28:38.18:479,38,0	1/1:6,0:39:73.90:319,74,0	1/1:8,29:38:74.71:678,75,0	1/1:2,0:18:30.15:130,30,0	1/1:3,13:17:35.69:317,36,0	1/1:4,14:20:47.33:396,47,0	1/1:3,22:29:59.27:573,59,0	1/1:2,10:14:32.47:274,32,0	1/1:3,9:12:27:250,27,0	1/1:3,21:25:51.82:504,52,0	1/1:2,18:20:42.04:389,42,0	1/1:2,14:16:38.99:361,39,0	1/1:2,27:29:81:733,81,0	1/1:7,38:44:78.73:724,79,0	1/1:2,13:16:32.90:352,33,0
chr10	25778156	.	A	AT	3935.13	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-13.795;DP=589;FS=4.625;HRun=2;HaplotypeScore=56.8660;InbreedingCoeff=0.9956;MQ=84.04;MQ0=0;MQRankSum=-0.784;QD=43.72;ReadPosRankSum=0.183;VQSLOD=2.8706;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:60.20:0,60,839	0/0:6,0:6:18.06:0,18,252	0/0:17,0:17:35.83:0,36,572	0/0:21,0:21:60.19:0,60,817	0/0:22,0:22:60.20:0,60,833	0/0:27,0:27:78.26:0,78,1085	0/0:18,0:18:48.14:0,48,638	1/1:0,33:33:99:1491,99,0	0/0:17,0:17:51.17:0,51,713	0/0:21,0:21:63.18:0,63,860	0/0:25,0:25:72.20:0,72,948	0/0:32,0:32:96.31:0,96,1328	0/0:23,0:23:69.19:0,69,934	0/0:14,0:14:42.13:0,42,572	1/1:0,31:31:81.28:1295,81,0	0/0:30,0:30:84.28:0,84,1175	1/1:0,26:26:72.25:1150,72,0	0/0:16,0:16:48.16:0,48,671	0/0:25,0:25:75.23:0,75,1015	0/0:25,0:25:75.25:0,75,1048	0/0:15,0:15:45.15:0,45,626	0/0:7,0:7:21.07:0,21,291	0/0:20,0:20:57.19:0,57,793	0/0:20,0:20:60.19:0,60,822	0/0:20,0:20:57.15:0,57,772	0/0:24,0:24:72.19:0,72,972	0/0:20,0:20:60.20:0,60,838	0/0:14,0:14:42.14:0,42,580
chr10	25779131	.	CT	C	12698.70	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=6.589;DP=539;FS=21.931;HRun=4;HaplotypeScore=124.7143;InbreedingCoeff=0.9989;MQ=82.70;MQ0=0;MQRankSum=-3.524;QD=32.73;ReadPosRankSum=5.936;VQSLOD=2.8303;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:51.17:0,51,713	1/1:0,9:9:24.07:288,24,0	0/0:23,0:23:57.15:0,57,751	0/0:19,0:19:50.75:0,51,670	1/1:0,22:22:63.19:755,63,0	1/1:1,30:31:87.27:1042,87,0	1/1:2,15:17:45.14:539,45,0	0/0:40,0:40:99:0,120,1540	1/1:0,14:14:42.13:503,42,0	1/1:1,18:19:54.15:635,54,0	1/1:2,22:24:63.11:736,63,0	1/1:1,17:18:42.09:487,42,0	1/1:0,15:15:42.13:503,42,0	1/1:1,16:17:48.15:575,48,0	0/0:29,0:29:75.20:0,75,1025	1/1:0,22:22:66.20:791,66,0	0/0:20,0:20:54.14:0,54,727	1/1:0,16:16:39.12:466,39,0	1/1:0,12:12:36.11:431,36,0	1/1:0,17:17:45.04:505,45,0	1/1:1,9:10:27.04:307,27,0	1/1:0,13:13:39.12:467,39,0	1/1:1,18:19:45.14:539,45,0	1/1:1,9:10:24.07:287,24,0	1/1:1,24:25:69.21:827,69,0	1/1:1,24:25:72.22:863,72,0	1/1:0,21:21:60.18:718,60,0	1/1:0,12:12:36.11:432,36,0
chr10	25779196	.	CAT	C	11311.61	PASS	AB=0.588;AC=43;AF=0.768;AN=56;BaseQRankSum=7.772;DP=413;FS=24.785;HRun=0;HaplotypeScore=145.7026;InbreedingCoeff=0.8796;MQ=75.12;MQ0=0;MQRankSum=-11.419;QD=38.47;ReadPosRankSum=3.346;VQSLOD=3.8249;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:45.12:0,45,785	1/1:0,6:6:18.06:258,18,0	0/0:16,0:16:32.94:0,33,848	0/0:12,0:12:20.58:0,21,492	1/1:1,21:22:54.07:690,54,0	1/1:0,25:25:75.25:1067,75,0	1/1:1,4:5:15.01:178,15,0	0/0:26,0:26:78.19:0,78,1490	1/1:0,9:9:27.09:391,27,0	0/1:6,14:20:4.03:694,0,4	1/1:0,14:14:39.12:540,39,0	1/1:0,10:10:30.10:433,30,0	1/1:0,7:7:20.98:256,21,0	1/1:2,11:13:36.10:496,36,0	0/0:29,0:29:78.27:0,78,1497	1/1:4,19:23:63.16:866,63,0	0/0:20,0:20:51.17:0,51,1002	1/1:0,8:8:21.07:302,21,0	1/1:0,9:9:27.09:394,27,0	1/1:0,25:25:74.99:975,75,0	1/1:0,4:4:12.04:166,12,0	1/1:0,12:12:36.01:460,36,0	1/1:1,17:18:48.15:643,48,0	1/1:1,4:5:2.75:44,3,0	1/1:0,17:17:51.17:708,51,0	1/1:0,14:14:42.05:556,42,0	1/1:1,21:22:66.20:930,66,0	1/1:0,6:6:18.06:265,18,0
chr10	25783691	.	G	GTGTGTGAGTGTGTGGC	6771.72	PASS	AB=1.000;AC=28;AF=0.500;AN=56;BaseQRankSum=-14.529;DP=512;FS=2.323;HRun=0;HaplotypeScore=256.6522;InbreedingCoeff=-0.5706;MQ=73.11;MQ0=6;MQRankSum=-2.515;QD=15.90;ReadPosRankSum=-1.950;VQSLOD=3.2582;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:18,0:18:83.90:84,0,521	0/0:6,0:6:12.01:0,12,234	0/0:46,0:28:55.04:0,55,619	0/0:33,0:19:24.86:0,25,211	0/1:11,0:11:75.96:76,0,239	0/1:21,0:21:96.75:97,0,945	0/1:13,0:13:67.90:68,0,642	1/1:25,0:25:62.89:962,63,0	0/1:7,0:7:48.70:106,0,49	0/1:18,0:18:99:203,0,372	0/1:15,0:15:74.96:75,0,230	0/1:22,0:22:99:132,0,925	0/1:19,0:19:86.59:87,0,789	0/1:8,0:8:75.86:76,0,426	1/1:12,4:15:36.07:1474,36,0	0/1:13,0:13:84.91:85,0,639	1/1:25,1:24:62.95:2067,63,0	0/1:27,0:27:99:170,0,1158	0/1:16,0:16:96.94:266,0,97	0/1:15,0:15:66.01:66,0,504	0/1:34,0:33:99:119,0,1269	0/1:10,0:10:11.19:11,0,429	0/1:10,0:10:35.99:36,0,357	0/1:16,0:16:57.89:58,0,750	0/1:17,0:17:24.73:25,0,834	0/1:17,0:16:99:119,0,563	0/1:15,0:15:99:150,0,494	0/1:17,0:17:99:161,0,674
chr10	25783773	.	A	AAAAC	19788.87	PASS	AB=0.690;AC=48;AF=0.857;AN=56;BaseQRankSum=-5.118;DP=510;FS=6.108;HRun=0;HaplotypeScore=73.3813;InbreedingCoeff=0.3722;MQ=68.27;MQ0=2;MQRankSum=-2.067;QD=41.93;ReadPosRankSum=1.257;VQSLOD=4.8928;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,0:26:21.07:355,21,0	1/1:1,3:4:6.02:145,6,0	0/0:14,0:14:15.05:0,15,231	0/0:24,0:21:9.03:0,9,144	0/1:6,7:14:66.91:459,0,67	1/1:4,16:19:39.13:942,39,0	1/1:12,8:21:24.08:580,24,0	0/1:19,3:23:27.44:316,0,27	1/1:4,16:21:51.18:1205,51,0	1/1:8,8:16:27.09:649,27,0	1/1:3,9:13:27.09:636,27,0	1/1:7,14:23:39.13:943,39,0	1/1:5,12:17:39.13:937,39,0	0/1:1,6:9:27.40:414,0,27	1/1:3,17:21:45.15:1087,45,0	1/1:6,17:25:48.16:1160,48,0	1/1:5,17:21:45.15:1087,45,0	1/1:6,9:16:27.09:653,27,0	0/1:13,5:20:12.39:579,0,12	1/1:4,11:15:30.10:724,30,0	1/1:4,17:22:48.16:1160,48,0	1/1:5,10:16:30.10:690,30,0	1/1:2,13:15:37.37:835,37,0	1/1:8,16:25:39.13:942,39,0	1/1:1,8:9:24.08:580,24,0	1/1:6,18:24:54.19:1299,54,0	1/1:6,17:22:42.14:996,42,0	1/1:3,5:10:18.06:417,18,0
chr10	25784010	.	T	TAA	15044.28	PASS	AB=1.000;AC=53;AF=0.946;AN=56;BaseQRankSum=-1.114;DP=544;FS=0.901;HRun=0;HaplotypeScore=119.8941;InbreedingCoeff=0.6402;MQ=67.41;MQ0=0;MQRankSum=-2.889;QD=28.33;ReadPosRankSum=5.855;VQSLOD=5.8811;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,36:41:91.50:1365,91,0	1/1:0,4:4:12.04:177,12,0	0/1:14,0:10:5.95:6,0,158	0/0:13,0:7:17.62:0,18,169	1/1:2,14:17:44.75:605,45,0	1/1:2,17:22:45.14:663,45,0	1/1:1,19:21:45.15:641,45,0	1/1:7,0:29:62.91:404,63,0	1/1:4,18:25:59.22:850,59,0	1/1:2,13:17:38.90:556,39,0	1/1:0,12:14:30.07:430,30,0	1/1:1,9:14:27.09:400,27,0	1/1:2,11:13:32.46:486,32,0	1/1:3,14:18:46.30:651,46,0	1/1:2,0:24:63.38:359,63,0	1/1:3,12:15:42.12:574,42,0	1/1:1,1:34:75.25:455,75,0	1/1:1,20:23:51.38:700,51,0	1/1:11,24:36:74.62:1121,75,0	1/1:5,8:14:24.74:351,25,0	1/1:1,10:12:5.74:248,6,0	1/1:1,6:6:18.06:264,18,0	1/1:3,9:12:28.32:422,28,0	1/1:2,19:22:57.92:824,58,0	1/1:4,0:17:9.83:129,10,0	1/1:1,24:26:71.48:1039,71,0	1/1:7,22:28:42.13:932,42,0	1/1:2,9:11:26.53:392,27,0
chr10	25785594	.	TTGTGTGTG	T	2476.62	PASS	AB=0.910;AC=38;AF=0.950;AN=40;BaseQRankSum=1.704;DP=610;FS=2.317;HRun=0;HaplotypeScore=143.4164;InbreedingCoeff=-0.0622;MQ=65.51;MQ0=14;MQRankSum=-2.087;QD=5.35;ReadPosRankSum=0.043;VQSLOD=2.7911;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:28:3:29,3,0	./.	./.	./.	./.	1/1:11,3:14:2.97:20,3,0	1/1:30,2:31:8.98:169,9,0	./.	1/1:19,3:21:3.01:74,3,0	1/1:26,7:31:6.93:152,7,0	./.	1/1:19,8:28:17.74:427,18,0	1/1:20,1:23:5.95:130,6,0	1/1:20,4:24:2.70:74,3,0	1/1:25,0:29:15.05:279,15,0	1/1:19,6:26:17.85:366,18,0	1/1:12,0:14:3.01:56,3,0	1/1:14,6:19:2.99:74,3,0	./.	1/1:13,0:13:2.03:105,2,0	0/1:39,0:39:29.45:122,0,29	1/1:13,3:16:6.02:149,6,0	1/1:10,1:13:2.89:56,3,0	0/1:31,7:38:0.01:0,0,0	1/1:17,2:19:3.01:74,3,0	1/1:19,0:20:3.01:56,3,0	./.	1/1:4,3:6:6.02:149,6,0
chr10	25785806	.	CTCTGTCTG	C	5970.69	PASS	AB=1.000;AC=42;AF=0.778;AN=54;BaseQRankSum=-3.211;DP=553;FS=4.553;HRun=0;HaplotypeScore=142.4684;InbreedingCoeff=0.5982;MQ=71.37;MQ0=22;MQRankSum=-0.891;QD=16.77;ReadPosRankSum=3.503;VQSLOD=4.0007;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:37:75.15:0,75,1672	1/1:4,0:4:9.03:148,9,0	0/0:41,0:21:23.28:0,23,636	0/0:53,0:23:21.89:0,22,557	1/1:18,0:18:3.01:30,3,0	1/1:18,0:17:25.78:403,26,0	1/1:6,12:17:3.01:40,3,0	0/0:23,0:23:11.05:0,11,177	1/1:11,1:12:6.02:95,6,0	1/1:15,0:15:34.30:529,34,0	./.	1/1:19,0:19:5.87:59,6,0	1/1:29,0:29:50.64:762,51,0	1/1:15,1:16:29.69:496,30,0	1/1:18,0:18:7.10:486,7,0	0/1:15,0:15:31.28:215,0,31	0/0:27,0:27:13.22:0,13,216	1/1:12,0:11:29.05:412,29,0	1/1:6,0:4:3.01:56,3,0	1/1:16,0:16:3.01:38,3,0	1/1:13,0:11:21.07:351,21,0	1/1:6,13:19:3.01:49,3,0	0/1:14,0:14:0.25:1,0,0	1/1:32,0:30:3.01:30,3,0	1/1:23,0:21:42.14:707,42,0	1/1:17,0:16:33.10:517,33,0	1/1:15,1:15:23.96:394,24,0	1/1:6,0:5:9.03:155,9,0
chr10	25785808	.	CTGTCTG	C	7139.12	PASS	AB=0.725;AC=41;AF=0.759;AN=54;BaseQRankSum=-2.755;DP=545;FS=1.111;HRun=0;HaplotypeScore=127.3624;InbreedingCoeff=0.4879;MQ=72.71;MQ0=21;MQRankSum=-2.066;QD=19.09;ReadPosRankSum=2.608;VQSLOD=4.6506;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:35:75.08:0,75,1575	1/1:4,0:4:9.03:148,9,0	0/0:43,0:23:29.24:0,29,729	0/0:53,0:23:21.85:0,22,559	1/1:2,13:15:3.01:73,3,0	1/1:17,0:17:33.07:512,33,0	0/1:18,0:17:43.21:53,0,43	0/0:25,0:25:8.46:0,8,172	1/1:2,9:11:6.02:107,6,0	1/1:1,13:14:37.35:571,37,0	./.	1/1:1,18:19:5.92:146,6,0	1/1:27,0:27:57.93:834,58,0	1/1:18,0:18:29.19:542,29,0	1/1:16,1:17:37.33:577,37,0	1/1:19,0:19:33.13:511,33,0	0/1:5,0:26:1.96:2,0,95	1/1:13,0:12:30.04:462,30,0	0/1:5,0:3:22.83:73,0,23	0/1:4,12:16:24.51:32,0,25	1/1:13,0:11:23.87:364,24,0	1/1:18,0:18:9:79,9,0	0/1:0,12:12:0.25:1,0,0	1/1:4,28:30:2.76:73,3,0	1/1:23,0:21:44.71:756,45,0	1/1:3,14:16:31.01:534,31,0	1/1:15,0:14:33.01:519,33,0	1/1:5,0:5:14.77:171,15,0
chr10	25786924	.	TG	T	3001.75	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=12.038;DP=634;FS=0.424;HRun=3;HaplotypeScore=93.2427;InbreedingCoeff=0.9883;MQ=88.17;MQ0=0;MQRankSum=-3.399;QD=30.02;ReadPosRankSum=1.013;VQSLOD=3.1556;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,32:33:84.26:1041,84,0	0/0:4,0:4:12.04:0,12,173	0/0:26,0:25:60.17:0,60,803	0/0:22,0:22:62:0,62,812	0/0:23,0:23:69.22:0,69,965	0/0:20,0:20:60.19:0,60,846	0/0:24,0:24:69.21:0,69,959	1/1:3,25:28:72.20:877,72,0	0/0:24,0:24:69.22:0,69,975	0/0:14,0:14:39.13:0,39,562	0/0:13,0:13:39.13:0,39,561	0/0:21,0:21:63.21:0,63,906	0/0:21,0:21:60.19:0,60,843	0/0:21,0:21:63.21:0,63,897	0/0:35,0:35:99:0,105,1511	0/0:28,0:28:81.27:0,81,1166	1/1:1,38:39:99:1227,99,0	0/0:28,0:28:84.27:0,84,1187	0/0:27,0:27:81.26:0,81,1142	0/0:28,0:28:84.27:0,84,1190	0/0:21,0:21:60.20:0,60,864	0/0:9,0:9:24.08:0,24,346	0/0:14,0:14:39.13:0,39,561	0/0:22,0:22:66.18:0,66,925	0/0:24,0:24:72.22:0,72,1002	0/0:19,0:19:57.19:0,57,820	0/0:32,0:31:93.31:0,93,1338	0/0:14,0:14:42.10:0,42,549
chr10	25787739	.	T	TTCTC	3484.36	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-10.212;DP=614;FS=4.277;HRun=0;HaplotypeScore=141.4527;InbreedingCoeff=0.9378;MQ=75.01;MQ0=4;MQRankSum=-2.388;QD=30.04;ReadPosRankSum=-1.337;VQSLOD=3.1037;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,0:40:76.78:327,77,0	0/0:6,0:6:9.02:0,9,101	0/0:33,0:17:26.54:0,27,288	0/0:34,0:20:6.14:0,6,177	0/0:26,0:26:50.64:0,51,474	0/0:12,0:12:18.02:0,18,170	0/0:25,0:27:42.93:0,43,397	1/1:8,33:41:93.28:1833,93,0	0/0:14,0:14:27.03:0,27,254	0/0:20,0:21:53.79:0,54,575	0/0:21,0:21:47.60:0,48,490	0/0:21,0:21:39.04:0,39,367	0/0:10,0:10:24.04:0,24,252	0/0:13,0:13:21.03:0,21,221	0/0:3,0:18:27.03:0,27,252	0/0:14,0:14:33.04:0,33,310	1/1:8,26:34:54.18:1325,54,0	0/0:33,0:34:62.76:0,63,560	0/0:24,0:24:47.14:0,47,451	0/0:21,0:22:51.08:0,51,518	0/0:11,0:11:21.03:0,21,198	0/0:24,0:24:59.39:0,59,545	0/0:13,0:13:35.79:0,36,331	0/0:19,0:18:39.05:0,39,368	0/0:25,0:25:53.41:0,53,473	0/0:18,0:18:33.05:0,33,321	0/0:19,0:20:41.36:0,41,350	0/0:16,0:16:32.78:0,33,295
chr10	25787750	.	TC	T	11332.26	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-11.180;DP=604;FS=7.290;HRun=1;HaplotypeScore=73.6325;InbreedingCoeff=0.9809;MQ=68.05;MQ0=19;MQRankSum=-0.795;QD=26.73;ReadPosRankSum=4.006;VQSLOD=4.3706;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:39:82.37:0,82,514	1/1:0,6:6:8.94:81,9,0	0/0:31,0:13:33.93:0,34,310	0/0:31,0:16:34.59:0,35,305	1/1:2,23:25:29.30:510,29,0	1/1:0,13:13:21.07:281,21,0	1/1:3,18:20:47.74:588,48,0	0/0:40,0:40:99:0,110,905	1/1:1,15:15:27.09:375,27,0	1/1:9,13:22:58.98:680,59,0	1/1:4,17:20:41.78:557,42,0	1/1:2,20:21:41.93:533,42,0	1/1:11,4:14:35.12:342,35,0	1/1:1,12:13:16.48:247,16,0	1/1:19,0:18:25.57:122,26,0	1/1:1,13:13:33.04:435,33,0	0/0:35,0:35:70.44:0,70,490	1/1:3,31:33:66.05:877,66,0	1/1:2,20:20:60.10:700,60,0	1/1:6,14:20:48.72:623,49,0	1/1:1,7:7:21.07:291,21,0	1/1:3,23:24:54.93:762,55,0	1/1:0,14:14:36.08:477,36,0	1/1:1,19:19:39.13:540,39,0	1/1:0,26:26:54.65:748,55,0	1/1:1,16:16:45.11:558,45,0	1/1:1,17:18:41.97:550,42,0	1/1:0,12:12:33.11:456,33,0
chr10	25788437	.	AC	A	18191.75	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=0.469;DP=720;FS=8.574;HRun=6;HaplotypeScore=111.0740;InbreedingCoeff=0.9485;MQ=85.07;MQ0=0;MQRankSum=-10.369;QD=27.11;ReadPosRankSum=7.161;VQSLOD=3.5372;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,40:42:99:1096,102,0	1/1:1,10:11:30.07:321,30,0	0/0:31,0:31:73.63:0,74,928	0/0:17,1:18:6.54:0,7,478	1/1:1,20:21:57.14:612,57,0	1/1:4,34:38:93.23:999,93,0	1/1:5,21:26:51.12:548,51,0	1/1:3,27:30:78.18:829,78,0	1/1:1,23:24:66.16:705,66,0	1/1:2,29:31:84.21:902,84,0	1/1:3,22:25:60.15:645,60,0	1/1:2,15:17:39.10:419,39,0	1/1:3,21:24:63.09:661,63,0	1/1:2,16:18:45.11:480,45,0	1/1:4,39:43:99:1160,108,0	1/1:3,36:39:96.24:1031,96,0	1/1:1,32:33:87.22:935,87,0	1/1:0,15:15:33.08:355,33,0	1/1:3,25:28:72.18:774,72,0	1/1:2,22:24:60.12:633,60,0	1/1:3,19:22:51.13:548,51,0	1/1:2,19:21:54.13:579,54,0	1/1:1,24:25:69.17:740,69,0	1/1:1,25:26:66.17:709,66,0	1/1:0,18:18:48.12:515,48,0	1/1:2,23:25:66.16:709,66,0	1/1:3,28:31:78.19:833,78,0	1/1:0,14:14:42.11:451,42,0
chr10	25788815	.	TGGGG	T	11581.76	PASS	AC=50;AF=0.926;AN=54;BaseQRankSum=-3.927;DP=450;FS=25.622;HRun=11;HaplotypeScore=131.9858;InbreedingCoeff=0.8795;MQ=69.46;MQ0=0;MQRankSum=-4.503;QD=28.74;ReadPosRankSum=4.385;VQSLOD=1.5292;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,16:20:30.07:463,30,0	1/1:1,4:5:12.04:188,12,0	0/0:26,0:18:29.24:0,29,293	0/0:20,0:16:10.42:0,10,116	1/1:4,12:16:33.10:484,33,0	1/1:3,13:16:36.11:559,36,0	1/1:2,8:10:15.04:230,15,0	1/1:7,22:28:63.13:933,63,0	1/1:3,8:11:21.05:328,21,0	1/1:1,10:12:33.06:468,33,0	1/1:4,22:26:50.22:753,50,0	1/1:4,16:20:42.13:656,42,0	1/1:5,9:14:27.05:413,27,0	1/1:1,20:21:54.18:831,54,0	1/1:3,0:22:16.08:45,16,0	1/1:4,11:15:27.02:413,27,0	1/1:3,6:9:9.03:140,9,0	1/1:6,18:24:45.09:704,45,0	1/1:7,4:11:12.01:187,12,0	1/1:1,13:14:30.06:431,30,0	1/1:5,9:14:12.03:180,12,0	1/1:1,11:12:33.11:513,33,0	1/1:3,8:11:14.77:213,15,0	1/1:2,13:15:27.06:422,27,0	1/1:1,9:10:30.10:466,30,0	1/1:4,20:24:60.18:897,60,0	1/1:2,20:22:44.63:666,45,0	./.
chr10	25788823	.	GGGGT	G	6370.41	PASS	AB=0.968;AC=38;AF=0.704;AN=54;BaseQRankSum=8.053;DP=431;FS=0.000;HRun=0;HaplotypeScore=138.0586;InbreedingCoeff=-0.0379;MQ=66.12;MQ0=0;MQRankSum=-5.578;QD=16.13;ReadPosRankSum=9.235;VQSLOD=3.2837;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:20,1:21:17.94:236,0,18	0/1:6,0:6:25.90:90,0,26	0/1:23,0:14:4.66:5,0,217	0/0:15,0:11:17.24:0,17,199	1/1:14,3:17:11.93:275,12,0	0/1:16,0:16:15.94:260,0,16	1/1:9,0:9:4.03:126,4,0	0/1:33,0:32:99:413,0,162	1/1:8,0:8:21:200,21,0	1/1:12,0:12:1.41:207,1,0	1/1:23,1:24:28.75:480,29,0	1/1:17,1:18:24:367,24,0	1/1:11,0:11:6.96:232,7,0	1/1:22,1:23:17.07:502,17,0	0/0:21,0:21:8.30:0,8,33	0/1:13,1:14:10.30:235,0,10	0/1:10,1:11:41.89:81,0,42	1/1:19,0:19:24.95:365,25,0	0/1:5,1:6:9.91:109,0,10	0/1:15,0:15:0.23:200,0,0	0/1:11,0:11:6.96:93,0,7	1/1:14,1:15:33.02:354,33,0	0/1:11,0:11:19.42:109,0,19	1/1:16,0:16:14.82:236,15,0	1/1:9,1:10:29.97:297,30,0	1/1:21,1:22:33.56:515,34,0	0/1:23,1:24:1.87:384,0,2	./.
chr10	25789417	.	TTC	T	688.33	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.515;DP=481;FS=6.468;HRun=0;HaplotypeScore=70.2350;InbreedingCoeff=0.9754;MQ=77.68;MQ0=0;MQRankSum=3.362;QD=27.53;ReadPosRankSum=3.029;VQSLOD=4.6125;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:26:69.24:0,69,1195	0/0:7,0:7:21.07:0,21,372	0/0:17,0:17:42.09:0,42,651	0/0:16,0:16:32.98:0,33,480	0/0:22,0:22:60.21:0,60,1056	0/0:19,0:19:54.18:0,54,940	0/0:17,0:17:45.15:0,45,786	0/0:21,0:21:57.16:0,57,979	0/0:8,0:8:24.08:0,24,425	0/0:19,0:19:51.17:0,51,880	0/0:26,0:26:72.23:0,72,1236	0/0:14,0:14:39.13:0,39,680	0/0:10,0:10:30.03:0,30,480	0/0:15,0:15:42.14:0,42,727	1/1:1,24:25:57.19:783,57,0	0/0:16,0:16:45.15:0,45,780	0/0:15,0:15:42.14:0,42,744	0/0:12,0:12:33.10:0,33,555	0/0:21,0:21:60.21:0,60,1050	0/0:22,0:22:60.21:0,60,1056	0/0:9,0:9:27.09:0,27,462	0/0:10,0:10:27.02:0,27,416	0/0:21,0:21:60.19:0,60,1028	0/0:15,0:15:42.14:0,42,725	0/0:25,0:25:72.18:0,72,1223	0/0:25,0:25:72.25:0,72,1263	0/0:22,0:22:66.14:0,66,1086	0/0:5,0:5:15.03:0,15,226
chr10	25789919	.	CTTAT	C	12382.21	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=1.783;DP=397;FS=7.539;HRun=0;HaplotypeScore=77.1385;InbreedingCoeff=0.6659;MQ=55.57;MQ0=2;MQRankSum=-3.017;QD=32.00;ReadPosRankSum=3.168;VQSLOD=4.1171;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,17:22:54.05:899,54,0	1/1:1,5:6:15.05:250,15,0	0/0:5,0:5:6.02:0,6,148	0/0:5,0:5:9.03:0,9,189	1/1:10,21:31:60.17:970,60,0	1/1:5,17:22:51.17:849,51,0	1/1:3,1:4:3.01:50,3,0	1/1:12,12:24:36.08:524,36,0	1/1:4,7:10:18.06:300,18,0	1/1:7,12:19:39.13:639,39,0	1/1:10,12:22:33.11:549,33,0	1/1:9,11:20:32.76:549,33,0	1/1:6,7:13:24.07:374,24,0	1/1:2,8:10:24.08:399,24,0	1/1:2,11:13:30.10:499,30,0	1/1:9,9:18:33.09:521,33,0	1/1:5,10:15:30.10:500,30,0	1/1:3,9:12:27.09:450,27,0	1/1:4,7:10:21.07:350,21,0	1/1:4,19:23:51.14:820,51,0	1/1:1,2:3:3.01:50,3,0	1/1:4,4:8:12.04:200,12,0	1/1:5,6:11:18.06:300,18,0	1/1:0,2:2:3.01:50,3,0	1/1:9,15:24:39.13:649,39,0	1/1:5,15:20:45.15:749,45,0	1/1:3,13:16:39.13:643,39,0	1/1:2,5:7:15.05:250,15,0
chr10	25789995	.	A	ATT	14764.82	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-2.958;DP=351;FS=0.657;HRun=3;HaplotypeScore=81.8190;InbreedingCoeff=0.8993;MQ=71.37;MQ0=0;MQRankSum=-3.990;QD=47.63;ReadPosRankSum=2.065;VQSLOD=4.2379;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,11:14:36.12:658,36,0	1/1:0,3:3:9.03:178,9,0	0/0:15,0:15:42.03:0,42,503	0/0:5,0:5:15.05:0,15,191	1/1:2,18:20:48.16:877,48,0	1/1:2,10:12:30.10:549,30,0	1/1:1,16:17:45.15:824,45,0	1/1:1,15:18:51.15:849,51,0	1/1:2,7:9:24.05:406,24,0	1/1:2,18:20:54.19:980,54,0	1/1:2,14:16:39.13:690,39,0	1/1:3,13:16:45.14:793,45,0	1/1:1,15:16:45.15:821,45,0	1/1:2,7:9:24.08:429,24,0	0/0:21,0:21:51.16:0,51,695	1/1:2,10:12:33.08:570,33,0	1/1:3,9:12:30.10:549,30,0	1/1:2,9:11:24.08:439,24,0	1/1:1,13:15:42.13:730,42,0	1/1:2,13:14:39.09:678,39,0	1/1:0,6:6:18.02:294,18,0	1/1:1,2:3:6.02:110,6,0	1/1:2,8:10:24.08:439,24,0	1/1:0,8:8:24.08:432,24,0	1/1:0,11:11:33.11:604,33,0	1/1:0,15:15:45.15:823,45,0	1/1:3,17:20:51.17:933,51,0	1/1:0,2:2:6.02:110,6,0
chr10	25790068	.	T	TTA	1674.86	PASS	AC=42;AF=0.840;AN=50;BaseQRankSum=2.844;DP=69;FS=3.324;HRun=0;HaplotypeScore=29.0268;InbreedingCoeff=0.2701;MQ=24.74;MQ0=12;MQRankSum=0.933;QD=33.50;ReadPosRankSum=-0.978;VQSLOD=4.8547;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,2:3:6.02:70,6,0	1/1:0,3:3:9.03:116,9,0	0/0:1,0:1:3.01:0,3,49	0/0:6,0:1:3.01:0,3,49	./.	1/1:0,1:1:3.01:40,3,0	./.	0/0:1,0:1:3.01:0,3,49	1/1:0,1:1:3.01:39,3,0	1/1:1,2:3:6.02:119,6,0	1/1:0,5:5:15.05:183,15,0	1/1:0,3:3:9.03:113,9,0	1/1:0,1:1:3.01:39,3,0	1/1:0,1:1:3.01:37,3,0	1/1:0,1:1:3.01:37,3,0	1/1:0,1:1:3.01:37,3,0	./.	1/1:1,3:3:6.02:122,6,0	0/0:4,0:1:0:0,0,0	1/1:0,2:2:6.02:74,6,0	1/1:2,2:2:6.02:75,6,0	1/1:0,1:1:3.01:37,3,0	1/1:0,2:2:6.02:73,6,0	1/1:0,2:2:5.69:48,6,0	1/1:0,1:1:3.01:38,3,0	1/1:1,2:2:6.02:122,6,0	1/1:0,6:6:18.06:310,18,0	1/1:0,1:1:3.01:58,3,0
chr10	25790350	.	T	TA	981.12	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=-5.597;DP=555;FS=1.969;HRun=11;HaplotypeScore=71.7769;InbreedingCoeff=0.7871;MQ=47.67;MQ0=30;MQRankSum=-1.977;QD=13.63;ReadPosRankSum=-2.860;VQSLOD=3.2363;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:36:89.39:0,89,689	0/0:7,0:7:17.91:0,18,139	0/0:13,0:7:20.73:0,21,152	0/1:8,0:4:8.14:8,0,36	0/0:20,0:20:26.78:0,27,245	0/0:21,0:20:50.79:0,51,394	0/0:9,0:8:17.93:0,18,139	1/1:13,21:28:25.20:565,25,0	0/0:18,0:17:35.49:0,35,268	0/0:14,0:14:26.88:0,27,209	0/0:18,0:18:29.27:0,29,320	0/0:16,0:15:39.94:0,40,290	0/0:22,0:21:55.79:0,56,423	0/0:15,0:13:32.86:0,33,255	0/0:23,0:23:67.77:0,68,513	0/0:18,1:17:20.40:0,20,341	1/1:6,23:27:54.54:534,55,0	0/0:17,0:16:38.77:0,39,295	0/0:15,0:14:34.90:0,35,261	0/0:24,0:24:55.78:0,56,424	0/0:25,0:23:62.69:0,63,481	0/0:7,0:6:14.94:0,15,116	0/0:20,0:19:50.79:0,51,393	0/0:18,0:14:23.89:0,24,186	0/0:28,0:28:59.75:0,60,464	0/0:28,2:30:34.32:0,34,440	0/0:24,0:23:53.76:0,54,418	0/0:14,0:11:35.86:0,36,278
chr10	25790547	.	T	TAAA	14104.70	PASS	AB=0.714;AC=51;AF=0.911;AN=56;BaseQRankSum=-4.217;DP=587;FS=25.959;HRun=11;HaplotypeScore=76.8516;InbreedingCoeff=0.8499;MQ=60.64;MQ0=3;MQRankSum=-3.550;QD=26.07;ReadPosRankSum=0.815;VQSLOD=1.7625;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,3:32:48.16:706,48,0	1/1:0,8:7:12.04:226,12,0	0/0:24,0:17:9.84:0,10,203	0/0:21,0:16:9.69:0,10,83	1/1:7,10:17:21.03:335,21,0	1/1:3,18:21:39.13:714,39,0	1/1:3,11:15:30:491,30,0	1/1:10,18:29:60.99:930,61,0	1/1:6,13:19:24.08:396,24,0	1/1:5,11:16:36.06:548,36,0	1/1:0,19:22:39.01:569,39,0	1/1:3,12:17:21.05:306,21,0	1/1:7,10:19:18.06:321,18,0	1/1:5,14:20:21.07:377,21,0	1/1:2,0:23:47.82:367,48,0	1/1:2,26:31:72.20:1252,72,0	1/1:4,24:29:39.13:733,39,0	1/1:2,16:19:23.93:451,24,0	1/1:12,12:24:38.92:501,39,0	1/1:5,27:37:71.99:1044,72,0	0/1:3,1:5:0:0,0,0	1/1:2,14:17:27.01:428,27,0	1/1:3,11:17:14.99:194,15,0	1/1:3,8:12:21.05:354,21,0	1/1:3,18:25:27.36:738,27,0	1/1:3,20:26:62.63:956,63,0	1/1:2,16:19:36.12:658,36,0	1/1:2,14:16:27.98:510,28,0
chr10	25790771	.	T	TAGAACCTCATTTGA	81334.34	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-4.697;DP=586;FS=1.761;HRun=0;HaplotypeScore=182.8187;InbreedingCoeff=0.9440;MQ=61.56;MQ0=0;MQRankSum=-7.927;QD=144.98;ReadPosRankSum=3.891;VQSLOD=5.1962;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,18:32:75.26:4748,75,0	1/1:5,5:9:24.08:1436,24,0	0/0:11,0:11:25.90:0,26,963	0/0:14,0:14:39.13:0,39,1304	1/1:12,8:23:39.13:2180,39,0	1/1:8,13:21:63.22:3798,63,0	1/1:11,8:22:48.08:2555,48,0	1/1:35,2:38:99:5944,111,0	1/1:13,9:22:60.21:3759,60,0	1/1:5,14:19:57.17:3434,57,0	1/1:8,5:17:36.12:2248,36,0	1/1:16,11:29:75.17:4460,75,0	1/1:15,15:31:84.29:5560,84,0	1/1:13,10:24:63.22:3842,63,0	1/1:9,16:26:75.26:4610,75,0	1/1:12,19:34:96.33:6160,96,0	1/1:10,6:19:36.09:1866,36,0	1/1:9,2:15:24.08:1496,24,0	1/1:9,6:16:42.14:2073,42,0	1/1:8,12:23:60.12:3480,60,0	1/1:10,0:10:24.06:867,24,0	1/1:7,10:17:42.14:2739,42,0	1/1:6,7:15:27.09:1476,27,0	1/1:4,9:17:30.10:1761,30,0	1/1:8,14:22:54.19:3449,54,0	1/1:10,11:22:66.23:3832,66,0	1/1:10,8:21:50.75:3304,51,0	1/1:0,2:8:6.02:259,6,0
chr10	25791067	.	CCTT	C	949.44	PASS	AB=0.993;AC=7;AF=0.125;AN=56;BaseQRankSum=1.962;DP=569;FS=20.213;HRun=0;HaplotypeScore=221.6995;InbreedingCoeff=0.1441;MQ=63.43;MQ0=0;MQRankSum=-7.217;QD=6.21;ReadPosRankSum=-7.615;VQSLOD=-0.4316;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:28,1:29:6.88:7,0,687	0/0:7,0:7:21.07:0,21,280	0/0:18,0:18:49.95:0,50,761	0/0:24,0:23:52.75:0,53,1044	0/0:17,0:17:36.12:0,36,485	0/0:16,0:16:16.12:0,16,430	0/1:17,0:17:33.85:34,0,342	0/1:30,0:30:41.78:42,0,653	0/0:25,0:25:9.23:0,9,694	0/0:28,0:28:21.19:0,21,852	0/0:14,0:14:36.12:0,36,513	0/0:25,0:25:52.24:0,52,927	0/0:28,0:28:32.26:0,32,874	0/0:27,0:27:58.17:0,58,972	1/1:5,17:22:60.05:904,60,0	0/0:33,0:33:4.27:0,4,874	0/0:23,0:23:58.02:0,58,746	0/0:5,0:5:12.04:0,12,168	0/1:22,0:22:54.74:55,0,511	0/0:12,0:12:30.10:0,30,409	0/0:20,0:20:33.11:0,33,436	0/0:26,0:26:51.17:0,51,697	0/0:15,0:15:8.10:0,8,330	0/0:16,0:16:17.56:0,18,208	0/0:13,0:13:33.11:0,33,443	0/0:18,0:18:36.15:0,36,630	0/1:33,0:33:41.67:42,0,777	0/0:6,0:6:6.10:0,6,117
chr10	25791083	.	T	TATTGATTG	28503.46	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=4.705;DP=605;FS=21.878;HRun=0;HaplotypeScore=214.2561;InbreedingCoeff=0.7783;MQ=69.44;MQ0=0;MQRankSum=-9.835;QD=52.30;ReadPosRankSum=3.940;VQSLOD=2.8251;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:28:33.11:1024,33,0	1/1:5,0:5:3.01:36,3,0	0/0:25,0:25:38.68:0,39,980	0/0:35,0:33:66.19:0,66,1502	1/1:13,5:18:21.07:646,21,0	1/1:7,10:19:33.11:1224,33,0	1/1:7,7:15:18.06:757,18,0	1/1:29,0:29:25.90:685,26,0	1/1:13,8:21:27.09:1020,27,0	1/1:23,11:34:66.21:2098,66,0	1/1:7,8:16:27.09:825,27,0	1/1:17,7:24:39.11:1200,39,0	1/1:13,12:26:39.13:1541,39,0	1/1:15,9:24:36.12:1373,36,0	1/1:14,15:29:62.01:2257,62,0	1/1:15,19:36:63.22:2398,63,0	1/1:14,0:16:24.08:668,24,0	1/1:3,2:7:12.04:451,12,0	1/1:22,5:25:36.11:1189,36,0	1/1:14,3:17:15.03:420,15,0	1/1:14,3:17:21.07:815,21,0	1/1:13,11:24:51.01:1623,51,0	1/1:5,9:14:27.09:999,27,0	1/1:10,6:18:7.74:128,8,0	1/1:10,2:13:6.02:252,6,0	1/1:14,7:21:42.09:1379,42,0	1/1:14,27:41:87.30:3245,87,0	1/1:2,3:5:6.02:252,6,0
chr10	25791185	.	T	TG	19847.86	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=7.017;DP=586;FS=38.899;HRun=1;HaplotypeScore=245.0316;InbreedingCoeff=0.9579;MQ=63.55;MQ0=0;MQRankSum=-9.653;QD=37.10;ReadPosRankSum=5.532;VQSLOD=-0.5352;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,18:23:27.53:465,28,0	1/1:1,9:10:27.09:386,27,0	0/0:23,0:23:62.89:0,63,750	0/0:27,1:27:58.37:0,58,680	1/1:2,20:22:34.39:500,34,0	1/1:3,18:21:57.19:845,57,0	1/1:0,17:17:51.10:728,51,0	1/1:3,26:29:84.27:1223,84,0	1/1:1,20:21:63.16:917,63,0	1/1:4,28:32:87.25:1237,87,0	1/1:2,15:17:33.11:493,33,0	1/1:0,24:24:66.22:976,66,0	1/1:2,25:27:72.24:1060,72,0	1/1:0,28:28:81.27:1170,81,0	1/1:1,26:27:75.20:1091,75,0	1/1:0,28:28:84.28:1257,84,0	1/1:0,12:12:32.94:431,33,0	1/1:0,3:3:9.03:135,9,0	1/1:5,12:17:48.09:643,48,0	1/1:5,23:28:62.67:848,63,0	1/1:0,10:10:17.99:234,18,0	1/1:1,15:16:42.14:628,42,0	1/1:2,22:24:57.61:821,58,0	1/1:2,14:16:41.92:511,42,0	1/1:3,17:20:48.12:693,48,0	1/1:6,23:29:78.12:1091,78,0	1/1:4,25:29:84.28:1243,84,0	1/1:0,5:5:15.05:224,15,0
chr10	25791211	.	C	CCCCCTTTTCAATGCTGGGAATTAA	93288.29	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=2.334;DP=602;FS=17.391;HRun=0;HaplotypeScore=353.9672;InbreedingCoeff=0.9407;MQ=63.67;MQ0=0;MQRankSum=-10.187;QD=167.78;ReadPosRankSum=3.012;VQSLOD=3.4288;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,5:24:30.02:2318,30,0	1/1:15,2:17:48.16:4161,48,0	0/0:21,0:21:53.37:0,53,2267	0/0:24,0:25:20.16:0,20,2682	1/1:6,10:36:57.19:4153,57,0	1/1:11,5:25:48.14:3768,48,0	1/1:23,0:23:60.17:3792,60,0	1/1:40,0:40:99:7117,117,0	1/1:7,1:8:24.04:2187,24,0	1/1:27,1:28:81.22:5742,81,0	1/1:10,4:26:51.12:3320,51,0	1/1:15,1:16:48.11:3496,48,0	1/1:19,2:21:57.14:3871,57,0	1/1:13,4:17:51.02:3203,51,0	1/1:22,2:24:72.18:3946,72,0	1/1:18,3:21:54.17:4446,54,0	1/1:9,0:9:23.97:1304,24,0	1/1:2,0:2:6.02:510,6,0	1/1:4,3:16:45.08:2975,45,0	1/1:9,9:37:54.18:5139,54,0	1/1:13,1:14:27.08:2049,27,0	1/1:8,3:28:33.11:2490,33,0	1/1:11,6:23:54.19:5165,54,0	1/1:17,0:17:27:1227,27,0	1/1:9,6:25:39.13:3769,39,0	1/1:16,5:30:78.22:6870,78,0	1/1:18,2:20:56.92:4119,57,0	1/1:3,4:7:21.07:2154,21,0
chr10	25791387	.	A	AT	18421.26	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=6.795;DP=506;FS=7.894;HRun=0;HaplotypeScore=215.4845;InbreedingCoeff=0.9483;MQ=69.69;MQ0=0;MQRankSum=-8.522;QD=39.45;ReadPosRankSum=3.819;VQSLOD=3.1881;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,15:15:33.04:465,33,0	1/1:0,4:4:12.04:180,12,0	0/0:22,0:18:16.98:0,17,566	0/0:17,0:16:36.16:0,36,606	1/1:4,26:30:84.10:1172,84,0	1/1:1,15:16:45.15:658,45,0	1/1:0,11:11:27.09:403,27,0	1/1:0,40:40:99:1630,111,0	1/1:1,13:14:42.07:601,42,0	1/1:2,26:28:84.28:1240,84,0	1/1:0,13:13:33.11:493,33,0	1/1:0,13:13:39.13:580,39,0	1/1:1,22:23:66.22:974,66,0	1/1:0,16:15:45.15:664,45,0	1/1:2,15:17:45.15:665,45,0	1/1:1,21:22:63.21:932,63,0	1/1:2,11:13:30.07:424,30,0	1/1:2,9:11:30.05:406,30,0	1/1:1,18:19:54.14:780,54,0	1/1:2,20:22:66.18:947,66,0	1/1:4,9:13:26.98:353,27,0	1/1:3,18:21:54.18:811,54,0	1/1:4,20:24:54.16:765,54,0	1/1:1,13:14:36.12:537,36,0	1/1:0,11:11:27.09:403,27,0	1/1:2,28:30:87.20:1246,87,0	1/1:1,22:23:66.21:958,66,0	1/1:0,3:3:9.03:135,9,0
chr10	25791395	.	GGTT	G	14959.82	PASS	AB=0.690;AC=51;AF=0.911;AN=56;BaseQRankSum=7.839;DP=490;FS=2.154;HRun=0;HaplotypeScore=256.1586;InbreedingCoeff=0.7407;MQ=61.91;MQ0=0;MQRankSum=-5.698;QD=33.32;ReadPosRankSum=4.410;VQSLOD=5.2440;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,8:16:27.98:357,28,0	1/1:1,3:4:12:161,12,0	0/0:22,0:16:44.46:0,44,548	0/0:19,0:17:34.11:0,34,481	1/1:7,19:26:49.67:922,50,0	1/1:1,12:13:34.98:576,35,0	1/1:6,5:11:25.52:316,26,0	1/1:27,11:38:31.12:747,31,0	1/1:3,9:12:31.31:472,31,0	1/1:12,14:26:66.06:892,66,0	1/1:3,9:12:31.14:465,31,0	1/1:3,14:18:50.86:700,51,0	1/1:5,20:25:68.83:987,69,0	1/1:1,15:15:45.11:676,45,0	1/1:2,15:17:51.13:757,51,0	1/1:2,20:22:61.38:966,61,0	1/1:5,7:12:28.27:372,28,0	1/1:3,7:10:26.59:368,27,0	0/1:10,9:20:8.81:534,0,9	1/1:12,10:22:49.79:619,50,0	1/1:6,5:11:15.74:157,16,0	1/1:10,11:21:34:565,34,0	1/1:7,14:21:50.94:708,51,0	1/1:7,7:14:27.09:329,27,0	1/1:4,5:9:26.92:318,27,0	1/1:7,20:27:39.58:909,40,0	1/1:3,20:23:68.99:998,69,0	1/1:1,2:3:4.90:89,5,0
chr10	25791408	.	TCCC	T	14889.84	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=8.607;DP=472;FS=21.179;HRun=4;HaplotypeScore=251.3440;InbreedingCoeff=0.9107;MQ=68.93;MQ0=1;MQRankSum=-8.134;QD=35.45;ReadPosRankSum=7.902;VQSLOD=0.9284;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:18:28.23:360,28,0	1/1:4,0:4:12.01:170,12,0	0/0:27,0:21:63.12:0,63,1048	0/0:23,0:21:49.47:0,49,927	1/1:23,0:23:57.14:900,57,0	1/1:18,0:18:49.55:676,50,0	1/1:11,0:11:22.23:289,22,0	1/1:23,1:25:42.06:604,42,0	1/1:12,0:12:33.03:485,33,0	1/1:16,5:21:51.17:815,51,0	1/1:10,1:11:33.06:518,33,0	1/1:17,1:18:54.08:771,54,0	1/1:23,0:23:62.95:962,63,0	1/1:20,0:19:53.56:746,54,0	1/1:21,0:21:59.18:829,59,0	1/1:24,0:24:69.12:1051,69,0	1/1:9,0:9:18.06:294,18,0	1/1:13,0:13:30.88:402,31,0	1/1:18,0:18:42.87:509,43,0	1/1:12,8:20:33.11:547,33,0	1/1:7,0:7:14.40:145,14,0	1/1:14,5:19:30.10:497,30,0	1/1:16,0:16:42.10:666,42,0	1/1:9,0:9:16.30:252,16,0	1/1:7,0:7:18.02:268,18,0	1/1:24,2:26:60.15:981,60,0	1/1:23,0:23:69.13:1053,69,0	1/1:3,0:3:6.02:100,6,0
chr10	25791587	.	T	TTG	31036.42	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-10.006;DP=687;FS=1.500;HRun=0;HaplotypeScore=80.5592;InbreedingCoeff=0.9862;MQ=82.89;MQ0=3;MQRankSum=-8.969;QD=50.88;ReadPosRankSum=5.033;VQSLOD=5.9111;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,14:17:45.14:852,45,0	1/1:0,15:15:39.13:791,39,0	0/0:22,0:22:62.79:0,63,942	0/0:27,0:26:75.19:0,75,1132	1/1:1,27:29:75.21:1455,75,0	1/1:0,26:28:69.24:1398,69,0	1/1:0,26:27:72.25:1461,72,0	1/1:2,27:29:72.25:1431,72,0	1/1:0,18:18:54.19:1095,54,0	1/1:1,22:22:63.21:1234,63,0	1/1:0,29:29:78.22:1490,78,0	1/1:0,26:28:66.23:1311,66,0	1/1:1,30:32:81.28:1613,81,0	1/1:0,30:31:78.27:1556,78,0	0/0:28,0:28:81.18:0,81,1214	1/1:0,29:29:75.19:1477,75,0	1/1:2,6:8:18.02:323,18,0	1/1:0,15:16:39.13:791,39,0	1/1:2,21:24:69.13:1224,69,0	1/1:2,31:34:87.30:1741,87,0	1/1:0,18:18:45.15:913,45,0	1/1:1,25:26:72.20:1392,72,0	1/1:0,30:32:74.97:1498,75,0	1/1:0,28:29:72.25:1461,72,0	1/1:0,27:27:69.24:1376,69,0	1/1:0,19:19:57.18:1089,57,0	1/1:0,31:32:90.31:1822,90,0	1/1:0,6:7:12.04:242,12,0
chr10	25791671	.	A	ACAG	3666.77	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-0.728;DP=683;FS=51.127;HRun=0;HaplotypeScore=186.1668;InbreedingCoeff=0.9889;MQ=83.46;MQ0=2;MQRankSum=-7.706;QD=48.25;ReadPosRankSum=-2.320;VQSLOD=1.3459;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,16:26:45.15:1035,45,0	0/0:5,0:5:12.04:0,12,205	0/0:26,0:26:72.28:0,72,1201	0/0:19,0:19:48.14:0,48,772	0/0:30,0:30:81.28:0,81,1381	0/0:18,0:18:39.13:0,39,665	0/0:24,0:24:66.23:0,66,1126	1/1:12,19:31:78.27:1736,78,0	0/0:23,0:23:63.20:0,63,1035	0/0:36,0:35:99:0,105,1749	0/0:23,0:22:63.14:0,63,1074	0/0:24,0:24:57.20:0,57,972	0/0:35,0:35:96.33:0,96,1637	0/0:29,0:29:81.07:0,81,1375	0/0:46,0:46:99:0,132,2248	0/0:32,0:32:87.28:0,87,1458	1/1:6,13:19:39.12:896,39,0	0/0:14,0:14:33.11:0,33,563	0/0:25,0:25:69.22:0,69,1128	0/0:33,0:33:87.28:0,87,1457	0/0:20,0:20:57.20:0,57,972	0/0:20,0:20:48.15:0,48,777	0/0:29,0:29:69.24:0,69,1173	0/0:17,0:17:48.16:0,48,819	0/0:23,0:23:60.21:0,60,1020	0/0:21,0:21:60.16:0,60,991	0/0:22,0:21:60.21:0,60,1020	0/0:13,0:13:36.05:0,36,554
chr10	25791710	.	A	AG	2431.87	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=7.021;DP=649;FS=20.656;HRun=0;HaplotypeScore=156.6643;InbreedingCoeff=0.9971;MQ=88.25;MQ0=0;MQRankSum=-8.296;QD=36.85;ReadPosRankSum=-1.664;VQSLOD=1.1328;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,21:21:60.20:885,60,0	0/0:6,0:6:18.04:0,18,233	0/0:23,0:23:63.19:0,63,861	0/0:29,0:29:84.19:0,84,1093	0/0:36,0:36:96.29:0,96,1280	0/0:17,0:17:51.16:0,51,695	0/0:18,0:18:54.18:0,54,752	1/1:3,18:21:50.89:749,51,0	0/0:29,0:29:81.24:0,81,1096	0/0:26,0:26:75.25:0,75,1042	0/0:18,0:18:54.16:0,54,716	0/0:20,0:20:60.20:0,60,839	0/0:24,0:24:72.24:0,72,1006	0/0:27,0:27:81.27:0,81,1127	0/0:35,0:35:99:0,105,1466	0/0:41,0:41:99:0,123,1719	1/1:0,24:24:63.21:940,63,0	0/0:20,0:20:60.20:0,60,838	0/0:25,0:25:75.24:0,75,1034	0/0:32,0:32:84.27:0,84,1148	0/0:28,0:28:84.28:0,84,1171	0/0:16,0:16:45.15:0,45,627	0/0:21,0:21:60.20:0,60,818	0/0:18,0:18:54.18:0,54,754	0/0:17,0:16:48.16:0,48,658	0/0:20,0:20:54.18:0,54,753	0/0:18,0:17:54.18:0,54,750	0/0:19,0:19:57.19:0,57,797
chr10	25791976	.	A	AT	493.69	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-1.082;DP=569;FS=6.266;HRun=8;HaplotypeScore=74.3484;InbreedingCoeff=0.9615;MQ=79.75;MQ0=0;MQRankSum=-1.731;QD=19.75;ReadPosRankSum=0.775;VQSLOD=3.4948;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,20:25:51.15:589,51,0	0/0:4,0:4:11.99:0,12,105	0/0:18,0:18:35.97:0,36,321	0/0:11,0:11:18:0,18,163	0/0:28,0:28:75.02:0,75,681	0/0:26,0:26:69.02:0,69,626	0/0:15,0:15:44.99:0,45,402	0/0:33,0:33:74.99:0,75,678	0/0:23,0:23:60.03:0,60,549	0/0:26,0:26:72.04:0,72,659	0/0:21,0:21:57.01:0,57,516	0/0:19,0:19:51.01:0,51,461	0/0:13,0:13:30.01:0,30,274	0/0:25,0:25:75.04:0,75,686	0/0:25,0:25:69.03:0,69,632	0/0:16,0:16:48.03:0,48,439	0/0:14,0:15:38.03:0,38,329	0/0:17,0:17:45.02:0,45,412	0/0:27,0:27:74.96:0,75,667	0/0:32,0:32:84.04:0,84,769	0/0:15,0:15:42.02:0,42,384	0/0:15,0:15:42.02:0,42,384	0/0:21,0:21:54.01:0,54,494	0/0:19,0:19:37.18:0,37,474	0/0:19,0:19:51.02:0,51,467	0/0:19,0:19:48.01:0,48,439	0/0:27,0:28:71.05:0,71,637	0/0:13,0:14:41.06:0,41,363
chr10	25792220	.	CTG	C	615.45	PASS	AB=0.851;AC=18;AF=0.321;AN=56;BaseQRankSum=7.560;DP=648;FS=1.221;HRun=0;HaplotypeScore=94.1810;InbreedingCoeff=-0.0550;MQ=57.09;MQ0=8;MQRankSum=-1.566;QD=1.59;ReadPosRankSum=0.302;VQSLOD=1.8174;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:14,1:28:25.70:126,26,0	0/0:5,0:5:6.02:0,6,91	0/0:31,0:16:6.49:0,6,87	0/0:11,0:4:2.97:0,3,20	0/1:21,3:24:33.95:34,0,351	0/1:22,4:26:99:121,0,334	0/1:12,5:16:15.46:15,0,203	0/1:28,0:33:2.94:3,0,27	0/1:17,6:23:91.94:92,0,409	0/0:23,0:25:15.20:0,15,316	0/1:13,4:18:30.89:31,0,396	0/1:28,5:34:78.86:79,0,751	0/0:10,0:10:18.06:0,18,273	0/1:20,2:22:27.88:28,0,441	1/1:14,0:40:12.57:57,13,0	0/0:33,0:34:44.81:0,45,945	1/1:12,0:19:5.68:28,6,0	0/0:13,0:18:23.99:0,24,280	0/0:15,0:15:14.96:0,15,190	0/1:21,1:24:24.56:25,0,444	0/0:28,1:34:5.18:0,5,420	0/0:15,0:15:18.03:0,18,250	0/1:19,4:24:99:106,0,368	0/1:17,5:23:24.93:25,0,440	0/0:30,1:32:29.26:0,29,783	0/0:20,0:20:21.07:0,21,319	0/1:25,3:28:12.87:13,0,639	0/0:9,0:8:6.01:0,6,72
chr10	25792872	.	CTATATATATA	C	2779.35	PASS	AB=1.000;AC=44;AF=0.846;AN=52;BaseQRankSum=0.707;DP=300;FS=2.422;HRun=0;HaplotypeScore=145.2978;InbreedingCoeff=0.2151;MQ=75.89;MQ0=0;MQRankSum=-1.778;QD=10.90;ReadPosRankSum=2.304;VQSLOD=2.6817;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:7,4:11:2.99:23,3,0	./.	0/0:15,0:9:0.87:0,1,2	0/1:23,0:14:1.04:1,0,27	1/1:8,1:9:5.99:48,6,0	1/1:21,0:21:32.99:368,33,0	1/1:9,0:9:5.95:48,6,0	0/0:21,0:21:24.20:0,24,180	1/1:5,0:5:6.02:89,6,0	0/1:16,0:15:19.22:259,0,19	1/1:13,0:13:8.89:98,9,0	1/1:6,0:6:8.98:73,9,0	1/1:11,0:11:6.02:100,6,0	1/1:7,0:7:6.02:100,6,0	1/1:4,1:5:9.03:183,9,0	1/1:16,1:17:18.03:287,18,0	0/1:5,0:5:9.57:10,0,28	1/1:7,0:7:3.01:31,3,0	1/1:10,0:10:7.54:207,8,0	1/1:8,0:8:2.97:20,3,0	1/1:8,0:8:8.98:72,9,0	./.	1/1:11,0:11:18.01:222,18,0	0/1:7,0:7:7.65:60,0,8	1/1:9,0:9:5.99:70,6,0	1/1:12,0:12:17.98:225,18,0	1/1:13,0:13:18.01:223,18,0	1/1:12,0:12:11.96:93,12,0
chr10	25792890	.	ATATATATG	A	2984.52	PASS	AB=0.746;AC=34;AF=0.739;AN=46;BaseQRankSum=-1.166;DP=231;FS=0.000;HRun=0;HaplotypeScore=97.2236;InbreedingCoeff=0.3240;MQ=55.41;MQ0=5;MQRankSum=-2.312;QD=18.31;ReadPosRankSum=1.395;VQSLOD=2.6212;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	0/1:0,6:6:0:0,0,0	0/0:15,0:4:0:0,0,0	0/0:21,0:9:0.16:0,0,37	0/1:3,1:4:0:0,0,0	0/1:5,14:19:9.95:311,0,10	0/1:2,4:6:0:0,0,0	1/1:9,0:9:14.81:98,15,0	1/1:0,2:2:6.02:153,6,0	1/1:1,11:11:22.05:388,22,0	1/1:0,10:10:3.01:82,3,0	./.	1/1:0,9:9:5:161,5,0	1/1:0,5:5:6.02:163,6,0	1/1:4,0:4:8.99:107,9,0	1/1:2,11:13:12.04:281,12,0	0/1:4,0:4:2.46:2,0,13	1/1:0,9:9:3.01:60,3,0	1/1:1,12:13:38.79:452,39,0	./.	0/1:5,0:4:0:0,0,0	./.	1/1:4,4:8:9.03:244,9,0	./.	1/1:1,7:8:3.01:81,3,0	1/1:2,6:8:12.01:265,12,0	1/1:2,7:9:9.03:244,9,0	0/0:5,6:11:2.99:0,3,23
chr10	25792898	.	GTA	G	278.98	PASS	AB=1.000;AC=23;AF=0.575;AN=40;BaseQRankSum=3.318;DP=197;FS=3.026;HRun=0;HaplotypeScore=74.3297;InbreedingCoeff=0.2631;MQ=46.51;MQ0=9;MQRankSum=-3.568;QD=2.51;ReadPosRankSum=5.203;VQSLOD=1.3675;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	0/0:17,1:6:3.76:0,4,18	0/0:2,0:2:0:0,0,0	0/1:15,0:14:32.13:37,0,32	./.	./.	1/1:2,0:2:4.04:16,4,0	1/1:12,0:11:9.02:44,9,0	1/1:10,0:10:2.80:13,3,0	./.	1/1:9,0:9:5.56:26,6,0	1/1:5,0:5:5.60:26,6,0	1/1:2,2:4:6.02:69,6,0	1/1:12,0:12:7.94:38,8,0	0/0:3,0:3:5.95:0,6,42	0/0:9,0:9:1.25:0,1,3	0/1:17,0:14:7.61:24,0,8	./.	0/0:5,0:4:5.48:0,5,30	0/0:1,0:1:1.25:0,1,3	0/1:5,0:5:12.56:27,0,13	./.	1/1:7,0:7:2.80:13,3,0	1/1:6,0:6:5.96:34,6,0	1/1:7,0:7:8.39:38,8,0	0/0:7,0:7:3.01:0,3,45
chr10	25792950	.	TTA	T	140	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=3.870;DP=331;FS=1.313;HRun=0;HaplotypeScore=68.8538;InbreedingCoeff=0.3955;MQ=86.79;MQ0=0;MQRankSum=0.922;QD=4.67;ReadPosRankSum=0.152;VQSLOD=2.2874;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:7:15.05:0,15,240	0/0:6,0:6:18.06:0,18,277	0/0:11,0:10:16.50:0,17,225	0/1:23,0:18:27.50:27,0,57	0/0:16,1:17:9.13:0,9,720	0/0:26,0:25:60.14:0,60,979	0/0:2,0:2:3.01:0,3,35	0/0:41,0:41:99:0,99,1644	0/0:9,0:9:24.08:0,24,408	0/0:15,0:14:39.13:0,39,639	0/0:11,0:11:21.07:0,21,340	0/0:8,0:8:18.06:0,18,292	0/0:13,0:13:21.07:0,21,357	0/0:7,0:7:18.06:0,18,306	1/1:0,7:7:18.02:215,18,0	0/0:6,0:6:6.02:0,6,102	0/0:12,0:12:30.10:0,30,478	0/0:16,0:16:33.11:0,33,544	0/0:15,0:15:39.13:0,39,643	0/0:9,0:9:27.09:0,27,404	0/0:7,0:7:18.06:0,18,306	0/0:1,0:1:3.01:0,3,51	0/0:10,0:10:24.08:0,24,391	0/0:1,0:1:3.01:0,3,51	0/0:12,0:12:33.11:0,33,554	0/0:13,0:13:33.11:0,33,542	0/0:15,0:15:42.14:0,42,712	0/0:10,0:10:21.07:0,21,331
chr10	25793326	.	T	TTA	32150.17	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-8.352;DP=646;FS=9.382;HRun=0;HaplotypeScore=79.2754;InbreedingCoeff=0.9822;MQ=91.04;MQ0=0;MQRankSum=-12.084;QD=54.96;ReadPosRankSum=6.959;VQSLOD=4.8869;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,24:23:66.23:1338,66,0	1/1:0,7:7:21.07:427,21,0	0/0:32,0:32:83.47:0,83,1359	0/0:29,0:29:75:0,75,1096	1/1:2,33:35:96.33:1907,96,0	1/1:2,27:29:87.30:1735,87,0	1/1:0,20:20:54.19:1097,54,0	1/1:5,32:39:99:2120,114,0	1/1:2,18:20:60.21:1190,60,0	1/1:2,31:32:93.31:1833,93,0	1/1:1,23:23:60.21:1202,60,0	1/1:1,15:16:42.14:853,42,0	1/1:1,20:21:63.22:1268,63,0	1/1:0,21:21:57.20:1157,57,0	1/1:0,21:22:60.21:1219,60,0	1/1:0,15:17:45.15:914,45,0	1/1:2,18:20:54.19:1095,54,0	1/1:2,11:13:36.12:731,36,0	1/1:2,19:22:63.22:1278,63,0	1/1:2,24:26:75.22:1474,75,0	1/1:4,11:15:36.12:729,36,0	1/1:3,22:25:72.19:1385,72,0	1/1:0,18:18:54.19:1092,54,0	1/1:1,23:24:57.19:1149,57,0	1/1:0,31:31:81.28:1645,81,0	1/1:1,18:19:57.20:1156,57,0	1/1:3,32:36:99:1933,99,0	1/1:1,3:4:12.04:222,12,0
chr10	25793377	.	CTT	C	5050.34	PASS	AB=0.799;AC=41;AF=0.732;AN=56;BaseQRankSum=-2.019;DP=576;FS=27.626;HRun=15;HaplotypeScore=121.6304;InbreedingCoeff=0.5233;MQ=71.76;MQ0=4;MQRankSum=-0.781;QD=11.25;ReadPosRankSum=5.925;VQSLOD=1.5448;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:22:40.86:0,41,244	1/1:2,4:6:11.72:91,12,0	0/0:21,0:18:11.68:0,12,120	0/1:23,0:18:17.11:17,0,157	1/1:13,12:27:26.42:238,26,0	1/1:10,16:27:47.48:408,47,0	1/1:4,8:12:27.88:240,28,0	0/0:28,0:29:54.94:0,55,576	0/1:9,6:16:6.62:144,0,7	1/1:7,10:17:23.75:235,24,0	1/1:9,16:26:35.14:328,35,0	1/1:6,7:13:10.77:172,11,0	1/1:12,9:21:15.42:288,15,0	0/1:13,3:16:4.85:118,0,5	0/0:25,0:27:55.57:0,56,597	1/1:2,6:10:26.48:208,26,0	0/0:20,0:23:29.36:0,29,297	1/1:4,10:17:35.06:273,35,0	0/1:15,4:20:18.69:147,0,19	1/1:14,15:34:22.49:396,22,0	1/1:6,8:14:23.38:210,23,0	1/1:6,10:16:32.87:290,33,0	0/1:11,7:21:17.92:186,0,18	1/1:7,8:16:23.54:196,24,0	1/1:16,9:22:20.60:171,21,0	1/1:14,14:31:1.45:319,1,0	1/1:14,13:26:30.98:287,31,0	1/1:2,2:5:11.69:91,12,0
chr10	25794447	.	C	CA	1003.28	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.798;DP=919;FS=2.654;HRun=1;HaplotypeScore=93.2920;InbreedingCoeff=0.9910;MQ=71.34;MQ0=20;MQRankSum=-2.404;QD=16.18;ReadPosRankSum=1.652;VQSLOD=4.0189;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,54:57:75.21:1098,75,0	0/0:10,0:10:27.09:0,27,350	0/0:36,0:25:68.91:0,69,841	0/0:42,0:33:96.78:0,97,1225	0/0:24,0:24:69.22:0,69,889	0/0:22,0:22:66.21:0,66,852	0/0:31,0:31:87.25:0,87,1098	0/0:27,0:18:48.14:0,48,605	0/0:27,0:27:72.23:0,72,934	0/0:33,0:33:93.18:0,93,1164	0/0:15,0:15:42.14:0,42,545	0/0:32,0:32:93.28:0,93,1179	0/0:38,0:38:99:0,111,1430	0/0:37,0:37:99:0,111,1437	0/0:54,0:54:99:0,159,2037	0/0:45,0:45:99:0,129,1658	0/0:37,0:35:66.21:0,66,853	0/0:28,0:27:84.22:0,84,1057	0/0:22,0:19:51.16:0,51,650	0/0:16,0:16:45.15:0,45,583	0/0:68,0:62:99:0,166,2124	0/0:25,0:24:72.23:0,72,929	0/0:25,0:24:72.18:0,72,914	0/0:41,0:40:99:0,117,1504	0/0:30,0:30:81.24:0,81,1035	0/0:43,0:41:99:0,114,1454	0/0:39,0:37:99:0,108,1374	0/0:9,0:6:18.06:0,18,234
chr10	25795190	.	A	AT	583.25	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-4.332;DP=632;FS=0.780;HRun=9;HaplotypeScore=64.0536;InbreedingCoeff=0.8166;MQ=70.72;MQ0=0;MQRankSum=-0.754;QD=21.60;ReadPosRankSum=0.796;VQSLOD=4.3280;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,1:38:94.88:0,95,813	0/0:8,0:8:17.96:0,18,153	0/0:6,0:6:11.98:0,12,100	0/0:10,0:10:14.99:0,15,128	0/0:41,0:42:99:0,122,1048	0/0:13,1:14:8.82:0,9,305	0/0:20,0:20:50.95:0,51,435	0/0:42,0:42:95.88:0,96,830	0/0:18,0:18:44.97:0,45,387	0/0:25,0:25:74.99:0,75,651	0/0:27,0:27:68.98:0,69,599	0/0:22,0:22:65.97:0,66,569	0/0:21,0:21:56.98:0,57,495	0/0:23,0:23:56.97:0,57,491	1/1:4,22:27:63:678,63,0	0/0:24,1:25:38.80:0,39,566	0/0:21,0:21:56.96:0,57,495	0/0:12,0:12:32.97:0,33,282	0/0:19,0:20:47:0,47,394	0/0:35,0:35:92.96:0,93,807	0/0:18,0:18:32.96:0,33,283	0/0:27,1:28:41.79:0,42,589	0/0:18,0:19:44.01:0,44,371	0/0:14,0:15:30.64:0,31,350	0/0:26,0:26:59.97:0,60,521	0/0:29,0:29:68.95:0,69,599	0/0:37,0:37:99:0,102,882	0/0:4,0:4:5.99:0,6,52
chr10	25795482	.	CCCTT	C	1527.13	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.256;DP=720;FS=2.219;HRun=0;HaplotypeScore=133.9042;InbreedingCoeff=0.9803;MQ=77.67;MQ0=2;MQRankSum=-2.237;QD=46.28;ReadPosRankSum=-1.393;VQSLOD=3.7672;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:76.92:0,77,2446	0/0:10,0:10:30.10:0,30,863	0/0:34,0:33:92:0,92,2143	0/0:32,0:26:44.25:0,44,1405	0/0:26,0:26:78.22:0,78,2035	0/0:23,0:23:69.24:0,69,1982	0/0:32,0:32:96.30:0,96,2476	0/0:36,0:36:14.20:0,14,1424	0/0:30,0:30:90.31:0,90,2561	0/0:28,0:28:81.26:0,81,2161	0/0:22,0:22:63.22:0,63,1780	0/0:32,0:32:93.31:0,93,2587	0/0:23,0:23:69.22:0,69,1936	0/0:21,0:21:63.22:0,63,1778	1/1:0,33:33:78.27:1622,78,0	0/0:26,0:26:78.24:0,78,2090	0/0:23,0:23:69.09:0,69,1163	0/0:19,0:19:57.16:0,57,1486	0/0:24,0:24:72.24:0,72,1948	0/0:31,0:31:93.28:0,93,2387	0/0:33,0:33:99:0,99,2682	0/0:21,0:21:63.16:0,63,1510	0/0:15,0:15:45.14:0,45,1208	0/0:26,0:26:78.24:0,78,2114	0/0:20,0:20:60.10:0,60,1445	0/0:17,0:17:51.18:0,51,1411	0/0:20,0:20:60.21:0,60,1631	0/0:10,0:10:30.10:0,30,729
chr10	25796735	.	GTCTCTCTCTC	G	134.03	PASS	AB=1.000;AC=7;AF=0.146;AN=48;BaseQRankSum=2.536;DP=452;FS=7.838;HRun=0;HaplotypeScore=130.1895;InbreedingCoeff=0.3355;MQ=67.77;MQ0=25;MQRankSum=1.341;QD=2.44;ReadPosRankSum=1.842;VQSLOD=2.1632;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:13,1:14:5.69:64,6,0	./.	0/0:32,0:13:0.47:0,0,1	0/0:61,0:21:0.47:0,0,1	0/0:19,0:19:6.02:0,6,249	0/0:23,0:21:14.98:0,15,227	0/0:9,0:9:9.01:0,9,174	./.	0/0:12,0:11:18.04:0,18,502	0/0:12,0:11:15.03:0,15,448	0/0:8,0:7:2.99:0,3,24	0/0:15,0:15:14.63:0,15,364	0/0:15,0:15:11.73:0,12,367	0/0:6,0:5:3.01:0,3,35	0/0:8,5:12:6.02:0,6,79	0/1:12,0:12:17.92:48,0,18	1/1:16,0:14:3.01:70,3,0	0/0:12,0:10:6.02:0,6,248	0/0:13,0:13:3.90:0,4,51	./.	0/0:30,0:27:6.44:0,6,418	0/0:14,0:13:3.01:0,3,50	./.	0/0:13,0:11:12.04:0,12,457	0/0:16,0:16:9.03:0,9,192	1/1:12,0:11:0.79:61,1,0	0/0:12,0:11:6.02:0,6,113	0/0:18,0:17:7.20:0,7,81
chr10	25797271	.	TAAC	T	1177.90	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.907;DP=701;FS=17.700;HRun=0;HaplotypeScore=98.1555;InbreedingCoeff=0.9989;MQ=73.75;MQ0=0;MQRankSum=-1.949;QD=38.00;ReadPosRankSum=0.784;VQSLOD=3.5925;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,129,2850	0/0:9,0:9:27.09:0,27,600	0/0:33,0:32:78.27:0,78,1660	0/0:26,0:25:62.29:0,62,1296	0/0:15,0:15:45.15:0,45,1005	0/0:21,0:21:60.21:0,60,1313	0/0:30,0:30:81.25:0,81,1717	0/0:24,0:24:72.23:0,72,1500	0/0:24,0:24:69.24:0,69,1478	0/0:27,0:27:72.25:0,72,1609	0/0:19,0:19:57.20:0,57,1273	0/0:23,0:23:63.19:0,63,1301	0/0:27,0:27:78.24:0,78,1639	0/0:21,0:21:63.20:0,63,1361	1/1:1,30:31:78.27:1273,78,0	0/0:26,0:26:75.24:0,75,1633	0/0:27,0:27:78.27:0,78,1735	0/0:26,0:26:75.26:0,75,1656	0/0:18,0:18:51.17:0,51,1117	0/0:29,0:29:84.25:0,84,1746	0/0:41,0:41:99:0,123,2675	0/0:17,0:17:45.14:0,45,960	0/0:17,0:17:48.15:0,48,1027	0/0:36,0:36:99:0,99,2192	0/0:17,0:17:51.18:0,51,1139	0/0:15,0:15:39.13:0,39,871	0/0:39,0:38:99:0,114,2471	0/0:19,0:19:57.20:0,57,1253
chr10	25798269	.	TA	T	20230.50	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=11.103;DP=645;FS=0.358;HRun=2;HaplotypeScore=61.7493;InbreedingCoeff=0.9982;MQ=74.33;MQ0=0;MQRankSum=-1.575;QD=39.36;ReadPosRankSum=2.981;VQSLOD=5.3151;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:90.29:0,90,1414	1/1:0,11:11:33.11:460,33,0	0/0:15,0:15:38.95:0,39,554	0/0:7,0:7:21.07:0,21,317	1/1:0,31:31:87.29:1217,87,0	1/1:0,19:19:48.16:671,48,0	1/1:0,16:16:45.15:628,45,0	0/0:33,0:33:96.31:0,96,1463	1/1:0,18:18:51.17:713,51,0	1/1:0,39:39:99:1617,117,0	1/1:0,13:13:39.13:545,39,0	1/1:0,29:29:78.26:1089,78,0	1/1:0,27:27:75.25:1049,75,0	1/1:0,40:40:99:1549,111,0	0/0:27,0:27:81.26:0,81,1272	1/1:0,23:23:69.23:964,69,0	0/0:19,0:19:57.18:0,57,888	1/1:0,21:21:60.20:839,60,0	1/1:0,32:32:96.23:1275,96,0	1/1:0,30:30:90.25:1225,90,0	1/1:0,18:18:51.17:713,51,0	1/1:0,16:16:45.15:623,45,0	1/1:0,24:24:69.23:965,69,0	1/1:0,14:14:36.12:503,36,0	1/1:0,23:23:63.21:881,63,0	1/1:0,23:23:69.21:944,69,0	1/1:0,39:39:99:1466,105,0	1/1:0,8:8:21.07:294,21,0
chr10	25798691	.	A	AAT	1997.42	PASS	AC=34;AF=0.739;AN=46;BaseQRankSum=-6.923;DP=168;FS=8.203;HRun=0;HaplotypeScore=28.7727;InbreedingCoeff=0.4952;MQ=90.42;MQ0=2;MQRankSum=1.432;QD=27.74;ReadPosRankSum=1.872;VQSLOD=3.9981;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:0,0:2:2.80:0,3,13	1/1:0,3:3:2.96:51,3,0	0/0:8,0:5:2.62:0,3,12	0/0:28,0:11:1.73:0,2,15	1/1:0,1:1:3.01:51,3,0	1/1:1,4:5:3.01:51,3,0	1/1:0,3:3:6.02:101,6,0	0/0:39,0:39:99:0,102,1183	1/1:0,1:2:3.01:51,3,0	./.	1/1:1,6:7:21.07:340,21,0	1/1:0,4:5:6.02:101,6,0	1/1:1,2:3:3.01:51,3,0	1/1:1,4:5:3.01:50,3,0	0/0:1,0:1:3.01:0,3,38	1/1:0,3:3:9.03:152,9,0	0/0:14,0:14:39.09:0,39,469	1/1:0,10:10:18.06:304,18,0	1/1:1,6:7:18.03:261,18,0	./.	./.	1/1:1,0:1:3.01:50,3,0	1/1:0,2:2:3.01:51,3,0	./.	./.	1/1:4,0:4:9.02:125,9,0	1/1:6,0:6:9.03:148,9,0	1/1:1,4:5:12.04:202,12,0
chr10	25799420	.	A	ATCTG	13780.87	PASS	AB=0.735;AC=49;AF=0.875;AN=56;BaseQRankSum=-2.819;DP=664;FS=2.969;HRun=0;HaplotypeScore=141.9857;InbreedingCoeff=0.3186;MQ=66.08;MQ0=9;MQRankSum=2.566;QD=22.16;ReadPosRankSum=1.858;VQSLOD=4.9390;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:20:21.06:245,21,0	1/1:4,8:13:11.68:270,12,0	0/0:18,0:10:2.02:0,2,57	0/0:24,0:17:4.75:0,5,82	1/1:11,12:23:18.06:427,18,0	1/1:9,15:24:30.10:714,30,0	0/1:7,9:16:32.31:270,0,32	1/1:70,0:70:99:1069,102,0	1/1:6,14:21:24.07:570,24,0	1/1:11,21:35:63.09:1275,63,0	1/1:9,13:23:21.07:499,21,0	1/1:10,12:22:18.06:428,18,0	1/1:8,24:33:39.06:927,39,0	1/1:10,13:23:24.08:570,24,0	1/1:9,0:21:18.06:313,18,0	1/1:5,17:22:24.06:570,24,0	0/1:9,0:9:5.13:16,0,5	1/1:6,6:13:8.96:161,9,0	1/1:11,0:9:9.03:152,9,0	1/1:8,7:15:6.02:143,6,0	1/1:10,7:17:9.03:214,9,0	1/1:14,18:32:21.07:499,21,0	1/1:10,10:21:30.02:713,30,0	1/1:3,8:12:15.05:319,15,0	1/1:7,9:17:24.08:571,24,0	1/1:15,21:38:60.15:1254,60,0	1/1:13,22:38:27.07:642,27,0	0/1:7,23:30:42.61:949,0,43
chr10	25799442	.	C	CTATT	5340.59	PASS	AB=1.000;AC=27;AF=0.482;AN=56;BaseQRankSum=10.254;DP=671;FS=11.129;HRun=0;HaplotypeScore=164.1870;InbreedingCoeff=-0.6579;MQ=57.74;MQ0=10;MQRankSum=0.624;QD=8.73;ReadPosRankSum=13.763;VQSLOD=0.9178;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:3,16:19:39.04:794,39,0	0/1:12,0:12:66.63:81,0,67	0/0:21,0:9:16.51:0,17,203	0/0:23,0:14:3.50:0,4,430	0/1:19,0:19:99:129,0,202	0/1:21,0:21:99:188,0,242	0/1:16,0:16:50.70:51,0,326	0/1:70,0:70:99:1137,0,434	0/1:23,0:23:99:163,0,193	0/1:40,0:40:99:206,0,779	0/1:22,0:22:99:145,0,164	0/1:23,0:23:82.51:83,0,421	0/1:37,0:37:99:263,0,298	0/1:23,0:22:99:190,0,243	0/1:17,0:17:47.11:79,0,47	0/1:24,0:23:99:198,0,242	1/1:14,0:14:24.79:316,25,0	0/1:17,0:17:9.81:10,0,336	0/0:15,0:13:25.76:0,26,427	0/1:18,0:18:12.70:13,0,404	0/1:12,0:12:59.16:59,0,73	0/1:32,0:31:99:125,0,343	0/1:21,0:21:99:212,0,203	0/1:16,0:16:59.67:60,0,205	0/1:13,0:13:70.17:152,0,70	0/1:28,0:28:99:248,0,244	0/1:46,0:46:99:152,0,700	0/1:29,0:29:99:288,0,161
chr10	25799539	.	G	GTATC	1065.07	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=3.969;DP=700;FS=18.285;HRun=0;HaplotypeScore=178.4224;InbreedingCoeff=0.7550;MQ=57.65;MQ0=0;MQRankSum=0.060;QD=28.03;ReadPosRankSum=-0.094;VQSLOD=2.3174;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,22:26:35.78:1159,36,0	0/0:11,0:11:27.09:0,27,479	0/0:21,0:19:47.82:0,48,718	0/1:11,0:9:1.83:2,0,222	0/0:34,0:34:44.97:0,45,808	0/0:30,0:30:63.20:0,63,1099	0/0:17,0:17:30.08:0,30,510	0/0:40,0:40:99:0,99,1485	0/0:16,0:16:39.13:0,39,700	0/0:30,0:30:78.26:0,78,1345	0/0:37,0:37:62.91:0,63,1122	0/0:23,0:23:57.20:0,57,1024	0/0:24,0:24:63.22:0,63,1124	0/0:24,0:24:51.14:0,51,882	0/0:27,0:27:51.15:0,51,885	0/0:28,0:28:72.22:0,72,1234	0/0:21,0:21:35.95:0,36,615	0/0:16,0:16:45.03:0,45,737	0/0:14,0:14:33.03:0,33,458	0/0:31,0:31:63.22:0,63,1113	0/0:16,0:16:36.12:0,36,647	0/0:29,0:29:35.62:0,36,846	0/0:27,0:27:36.12:0,36,646	0/0:20,0:20:33.11:0,33,593	0/0:35,0:35:75.09:0,75,1312	0/0:27,0:26:69.16:0,69,1080	0/0:44,0:44:99:0,111,1900	0/0:20,0:20:36.12:0,36,646
chr10	25799581	.	C	CTATG	396.60	PASS	AB=1.000;AC=27;AF=0.587;AN=46;BaseQRankSum=-6.469;DP=621;FS=0.000;HRun=0;HaplotypeScore=219.4411;InbreedingCoeff=0.1698;MQ=45.37;MQ0=7;MQRankSum=3.147;QD=1.02;ReadPosRankSum=1.237;VQSLOD=2.1487;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:26,2:27:5.45:47,5,0	1/1:9,0:9:1.25:3,1,0	0/0:16,0:11:14.42:0,14,137	./.	./.	0/1:22,0:22:10.13:14,0,10	0/1:12,0:12:8.54:32,0,9	1/1:42,0:38:13.38:103,13,0	1/1:12,0:12:3:25,3,0	0/0:30,0:29:21.62:0,22,127	./.	0/1:18,0:18:11.73:19,0,12	0/1:20,0:20:8.15:8,0,45	0/1:20,0:20:10.14:19,0,10	1/1:18,3:21:5.03:30,5,0	0/0:21,0:21:18.53:0,19,126	0/1:17,0:17:0:0,0,0	1/1:14,0:14:11.89:84,12,0	0/0:16,0:15:22.71:0,23,148	./.	1/1:15,0:16:5.97:46,6,0	0/1:25,0:25:18.20:20,0,18	./.	1/1:20,0:20:2.98:21,3,0	1/1:37,0:37:5.97:45,6,0	0/1:21,0:21:2.65:3,0,67	0/1:33,0:33:26.33:26,0,86	0/0:15,0:15:11.79:0,12,74
chr10	25799609	.	GTACGTATGTATGTATCTATCTATC	G	7882.35	PASS	AB=0.710;AC=41;AF=0.759;AN=54;BaseQRankSum=0.653;DP=525;FS=16.603;HRun=0;HaplotypeScore=258.8319;InbreedingCoeff=0.5276;MQ=40.19;MQ0=25;MQRankSum=3.103;QD=20.01;ReadPosRankSum=1.591;VQSLOD=2.3226;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:19:8.74:0,9,120	1/1:8,0:8:6.02:124,6,0	0/0:37,0:11:27.09:0,27,512	0/0:34,0:8:16.29:0,16,421	0/1:3,26:28:0:0,0,0	1/1:18,0:18:15.05:336,15,0	1/1:9,0:9:14.26:255,14,0	1/1:30,0:28:64.70:867,65,0	1/1:6,0:6:3.88:27,4,0	1/1:1,24:25:53.77:1183,54,0	0/1:0,27:27:0.02:0,0,0	1/1:13,0:13:9.03:192,9,0	1/1:15,0:15:12.04:292,12,0	1/1:17,0:17:12.04:276,12,0	0/0:15,0:14:5.76:0,6,66	1/1:15,0:15:32.50:933,33,0	1/1:9,0:9:3.32:91,3,0	0/1:13,0:13:1.23:197,0,1	1/1:0,11:11:33.09:935,33,0	0/1:2,23:25:0:0,0,0	1/1:14,0:14:6.74:92,7,0	1/1:20,0:19:6.01:126,6,0	./.	1/1:11,0:11:3.01:46,3,0	1/1:23,0:23:6:69,6,0	1/1:0,17:17:36.11:805,36,0	1/1:21,0:21:27.09:682,27,0	0/1:18,0:17:57.12:354,0,57
chr10	25799645	.	GTA	G	47.63	PASS	AB=0.968;AC=8;AF=0.154;AN=52;BaseQRankSum=0.468;DP=514;FS=5.111;HRun=0;HaplotypeScore=212.5952;InbreedingCoeff=0.2343;MQ=39.21;MQ0=16;MQRankSum=3.343;QD=0.39;ReadPosRankSum=0.933;VQSLOD=2.4268;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:35:24.52:0,25,445	0/0:6,0:6:6.01:0,6,59	0/0:35,0:6:11.68:0,12,225	0/0:30,0:11:24.86:0,25,333	0/0:27,0:27:3.01:0,3,57	0/0:13,0:13:21.13:0,21,303	./.	0/0:35,0:30:77.45:0,77,910	0/0:8,0:8:0.14:0,0,52	0/0:21,0:21:29.98:0,30,413	0/0:28,0:28:3.01:0,3,58	0/0:11,0:11:9.03:0,9,137	0/0:16,0:16:21.06:0,21,355	0/1:13,0:13:9.30:9,0,201	0/1:15,0:14:0:0,0,0	0/0:13,0:13:23.63:0,24,266	0/0:12,0:12:15.95:0,16,175	0/0:13,0:13:31.67:0,32,372	0/0:12,0:10:16.09:0,16,150	1/1:31,2:31:4.49:28,4,0	0/0:10,0:10:2.47:0,2,7	1/1:16,2:17:2.50:24,3,0	./.	0/0:8,0:8:3:0,3,58	0/0:21,0:21:24.08:0,24,408	0/1:22,2:22:5.30:5,0,134	0/1:17,1:18:85.64:91,0,86	0/0:5,2:6:8.51:0,9,78
chr10	25799764	.	A	AC	265.16	PASS	AC=2;AF=0.038;AN=52;BaseQRankSum=-3.161;DP=478;FS=7.162;HRun=6;HaplotypeScore=83.7118;InbreedingCoeff=0.7992;MQ=42.10;MQ0=41;MQRankSum=-1.339;QD=11.05;ReadPosRankSum=0.277;VQSLOD=1.5939;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,20:24:30.05:359,30,0	0/0:6,0:6:9.02:0,9,92	./.	./.	0/0:25,0:24:45.06:0,45,458	0/0:19,0:18:15.03:0,15,153	0/0:14,0:12:26.93:0,27,242	0/0:21,0:3:6:0,6,54	0/0:17,0:16:30.07:0,30,306	0/0:21,0:17:42.08:0,42,423	0/0:19,0:19:30.05:0,30,298	0/0:23,0:21:42.04:0,42,416	0/0:18,0:15:36.04:0,36,356	0/0:15,0:13:24.05:0,24,245	0/0:14,0:13:15.03:0,15,153	0/0:12,0:12:30.07:0,30,306	0/0:21,0:15:24.01:0,24,244	0/0:17,0:15:30.07:0,30,306	0/0:11,0:5:15.03:0,15,153	0/0:25,0:24:55.92:0,56,549	0/0:13,0:7:14.99:0,15,142	0/0:18,0:18:27.05:0,27,275	0/0:23,0:20:30.02:0,30,305	0/0:19,0:17:24.05:0,24,245	0/0:25,0:25:44.13:0,44,434	0/0:17,0:16:45.06:0,45,447	0/0:21,0:21:33.07:0,33,336	0/0:7,0:7:18.04:0,18,184
chr10	25799842	.	T	TG	9161.95	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-4.186;DP=379;FS=10.021;HRun=0;HaplotypeScore=48.6531;InbreedingCoeff=0.7206;MQ=39.09;MQ0=7;MQRankSum=-4.186;QD=25.38;ReadPosRankSum=4.088;VQSLOD=5.5346;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,12:9:9.03:143,9,0	1/1:0,10:9:6.02:95,6,0	0/0:11,0:10:16.60:0,17,192	0/0:7,0:5:12.01:0,12,134	1/1:0,25:25:14.97:208,15,0	1/1:0,16:15:24.08:382,24,0	1/1:2,11:12:30.10:456,30,0	1/1:3,13:13:27.05:382,27,0	1/1:0,15:15:36.12:573,36,0	1/1:1,14:14:42.14:667,42,0	1/1:0,17:17:14.97:208,15,0	1/1:0,25:25:63.21:990,63,0	1/1:1,8:9:21.07:333,21,0	1/1:1,15:16:27.09:430,27,0	1/1:0,18:18:33.11:525,33,0	1/1:0,11:10:15.05:239,15,0	1/1:0,10:6:9.03:131,9,0	1/1:0,9:9:18.06:279,18,0	1/1:2,9:8:21.07:330,21,0	1/1:0,15:15:27.01:399,27,0	1/1:0,5:4:6.02:96,6,0	1/1:1,22:23:30.02:446,30,0	1/1:0,11:11:6.02:95,6,0	1/1:1,8:9:12.04:191,12,0	1/1:0,13:12:24.08:382,24,0	1/1:1,17:15:45.15:706,45,0	1/1:0,12:12:24.08:382,24,0	1/1:0,3:3:6.02:96,6,0
chr10	25800194	.	C	CTATG	876.94	PASS	AB=0.991;AC=18;AF=0.346;AN=52;BaseQRankSum=4.237;DP=835;FS=22.160;HRun=0;HaplotypeScore=262.7142;InbreedingCoeff=-0.2150;MQ=50.37;MQ0=14;MQRankSum=-1.558;QD=1.62;ReadPosRankSum=-6.596;VQSLOD=0.0289;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:3.62:0,4,25	0/0:11,0:11:5.98:0,6,47	./.	./.	0/1:49,0:47:11.55:12,0,61	0/1:28,0:27:16.03:64,0,16	1/1:12,0:11:2.93:37,3,0	1/1:49,0:46:14.85:102,15,0	0/1:32,0:31:15.11:15,0,59	0/1:37,0:36:99:130,0,227	0/1:29,0:28:9.03:9,0,72	0/0:28,0:26:9.87:0,10,76	0/1:38,0:34:18.72:19,0,61	0/0:19,0:18:8.99:0,9,75	0/1:41,0:39:32.96:66,0,33	0/0:29,0:26:8.95:0,9,68	0/1:23,4:26:0.94:415,0,1	0/0:25,0:25:14.62:0,15,116	0/0:21,0:19:5.93:0,6,40	0/0:38,0:36:26.93:0,27,219	0/0:19,0:19:8.97:0,9,71	0/1:39,0:38:31.41:31,0,62	0/1:27,0:25:16.95:17,0,19	0/0:19,0:19:0:0,0,0	0/1:48,0:47:11.96:12,0,85	0/1:35,0:32:43.95:44,0,202	0/1:41,0:41:46.84:47,0,76	0/1:10,0:10:6.05:6,0,58
chr10	25801990	.	CAAACAACAA	C	2593.94	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.834;DP=501;FS=16.658;HRun=0;HaplotypeScore=145.2474;InbreedingCoeff=0.9341;MQ=67.03;MQ0=0;MQRankSum=-3.160;QD=58.95;ReadPosRankSum=-3.827;VQSLOD=1.4432;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,114,4910	0/0:6,0:6:18.06:0,18,811	0/0:24,0:19:41:0,41,1498	0/0:26,0:24:68.72:0,69,2201	0/0:18,0:18:54.19:0,54,2199	0/0:22,0:22:63.69:0,64,2687	0/0:23,0:23:69.24:0,69,2841	1/1:0,25:25:75.26:1783,75,0	0/0:16,0:16:45.15:0,45,1965	0/0:19,0:19:57.18:0,57,2255	0/0:14,0:13:36.12:0,36,1433	0/0:21,0:22:14.81:0,15,2703	0/0:20,0:20:60.18:0,60,2402	0/0:12,0:12:33.11:0,33,1445	0/0:20,0:20:57.20:0,57,2280	0/0:15,0:15:42.14:0,42,1672	1/1:14,5:19:41.86:932,42,0	0/0:9,0:9:27.09:0,27,1163	0/0:13,0:13:36.12:0,36,1048	0/0:19,0:19:51.17:0,51,1927	0/0:13,0:13:36.12:0,36,1579	0/0:11,0:11:33.07:0,33,1247	0/0:7,0:7:21.07:0,21,739	0/0:26,0:26:75.12:0,75,2908	0/0:23,0:23:66.23:0,66,2282	0/0:11,0:11:33.11:0,33,1521	0/0:27,0:27:75.26:0,75,3142	0/0:2,0:2:6.02:0,6,287
chr10	25802037	.	ACCC	A	1371.03	PASS	AB=0.958;AC=5;AF=0.089;AN=56;BaseQRankSum=-0.486;DP=421;FS=0.000;HRun=11;HaplotypeScore=80.8586;InbreedingCoeff=0.7816;MQ=72.17;MQ0=2;MQRankSum=-0.115;QD=18.78;ReadPosRankSum=4.661;VQSLOD=1.6403;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,26:33:72.08:900,72,0	0/0:5,0:5:15.05:0,15,288	0/0:30,0:20:23.89:0,24,325	0/1:22,0:14:4.03:4,0,87	0/0:12,0:12:27.09:0,27,545	0/0:10,0:11:12.02:0,12,204	0/0:23,0:25:57.08:0,57,909	0/0:13,0:20:41.91:0,42,368	0/0:11,0:11:24.08:0,24,470	0/0:12,0:13:18.03:0,18,286	0/0:11,0:11:27.08:0,27,507	0/0:21,0:21:60.14:0,60,933	0/0:8,0:9:18.03:0,18,265	0/0:12,0:13:22.15:0,22,356	1/1:1,16:17:45.14:591,45,0	0/0:10,0:12:24.06:0,24,417	0/0:11,0:20:54.29:0,54,426	0/0:8,0:9:24.02:0,24,379	0/0:6,0:11:24.07:0,24,383	0/0:9,0:11:27.09:0,27,468	0/0:9,0:8:12.04:0,12,242	0/0:11,0:11:21.07:0,21,424	0/0:6,0:7:17.89:0,18,242	0/0:15,0:16:39.07:0,39,638	0/0:14,0:14:24.01:0,24,425	0/0:15,0:16:21.04:0,21,345	0/0:23,0:23:54.15:0,54,990	0/0:7,0:7:15.05:0,15,290
chr10	25802254	.	CTT	C	1832.50	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=6.075;DP=512;FS=1.020;HRun=11;HaplotypeScore=82.6081;InbreedingCoeff=0.9949;MQ=70.82;MQ0=0;MQRankSum=-0.365;QD=19.49;ReadPosRankSum=1.579;VQSLOD=3.0354;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,0:31:57.62:252,58,0	0/0:12,0:12:33.11:0,33,504	0/0:21,1:19:38.46:0,38,481	0/0:11,0:11:22.61:0,23,184	0/0:35,0:35:93.28:0,93,1369	0/0:24,0:25:69.23:0,69,1042	0/0:20,0:20:57.18:0,57,855	1/1:5,31:36:90.20:958,90,0	0/0:12,0:12:30.09:0,30,440	0/0:15,0:15:36.11:0,36,535	0/0:17,0:17:33.10:0,33,488	0/0:17,0:17:42.14:0,42,647	0/0:13,0:14:42.14:0,42,628	0/0:11,0:11:30.10:0,30,461	0/0:3,0:14:29.94:0,30,103	0/0:12,0:12:33.10:0,33,487	1/1:0,27:27:72.18:766,72,0	0/0:19,0:19:54.18:0,54,831	0/0:13,0:13:30.10:0,30,454	0/0:19,0:19:57.16:0,57,831	0/0:9,0:9:24.08:0,24,369	0/0:13,0:13:27.08:0,27,395	0/0:15,0:15:27.09:0,27,416	0/0:9,0:9:21.07:0,21,323	0/0:16,0:16:48.16:0,48,739	0/0:14,0:15:35.61:0,36,514	0/0:28,0:28:72.24:0,72,1086	0/0:21,0:24:62.17:0,62,851
chr10	25802953	.	AT	A	10001.38	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-0.803;DP=571;FS=12.856;HRun=10;HaplotypeScore=95.7252;InbreedingCoeff=0.9912;MQ=84.45;MQ0=0;MQRankSum=-3.362;QD=20.97;ReadPosRankSum=5.562;VQSLOD=4.2382;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,24:27:40.43:498,40,0	1/1:1,10:11:26.99:234,27,0	0/0:17,0:18:30.99:0,31,337	0/0:26,0:26:47.37:0,47,456	1/1:1,29:30:83.97:727,84,0	1/1:2,24:26:65.99:573,66,0	1/1:2,8:10:23.99:208,24,0	0/0:19,0:19:45.11:0,45,491	1/1:0,14:14:29.99:260,30,0	1/1:6,23:29:71.98:624,72,0	1/1:6,19:25:59.95:520,60,0	1/1:2,18:20:47.99:416,48,0	1/1:0,14:14:38.99:338,39,0	1/1:4,9:13:17.98:156,18,0	0/0:18,0:18:51.12:0,51,555	1/1:3,22:25:62.99:547,63,0	0/0:12,1:13:13.05:0,13,372	1/1:6,14:20:46.21:393,46,0	1/1:3,14:17:41.95:360,42,0	1/1:6,23:29:68.97:599,69,0	1/1:3,14:17:38.98:339,39,0	1/1:4,20:24:53.97:468,54,0	1/1:3,17:20:50.97:443,51,0	1/1:1,13:14:35.99:313,36,0	1/1:2,15:17:38.99:338,39,0	1/1:5,27:32:77.48:676,77,0	1/1:4,26:31:77.02:657,77,0	1/1:0,12:12:35.99:313,36,0
chr10	25803151	.	GAAT	G	16085.73	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=11.122;DP=587;FS=10.060;HRun=0;HaplotypeScore=94.0550;InbreedingCoeff=0.9949;MQ=78.76;MQ0=0;MQRankSum=-4.795;QD=38.39;ReadPosRankSum=4.451;VQSLOD=5.7714;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,147,3235	1/1:0,7:7:15.05:249,15,0	0/0:12,0:12:30.02:0,30,601	0/0:19,0:19:48.14:0,48,941	1/1:1,26:27:47.86:799,48,0	1/1:0,19:19:51.17:849,51,0	1/1:1,19:20:45.15:749,45,0	0/0:45,0:45:99:0,120,2649	1/1:1,22:23:60.21:998,60,0	1/1:3,19:22:57.17:890,57,0	1/1:1,22:23:45.15:749,45,0	1/1:1,13:14:36.12:595,36,0	1/1:0,16:16:33.11:549,33,0	1/1:0,17:17:48.16:799,48,0	0/0:15,0:15:45.15:0,45,1015	1/1:4,25:29:69.24:1148,69,0	0/0:27,0:27:81.28:0,81,1827	1/1:0,15:15:36.12:600,36,0	1/1:5,17:22:48.16:776,48,0	1/1:1,17:18:39.13:649,39,0	1/1:0,20:20:44.74:749,45,0	1/1:0,16:16:42.14:699,42,0	1/1:1,19:20:36.40:599,36,0	1/1:0,18:18:42.14:695,42,0	1/1:2,17:19:39.13:650,39,0	1/1:2,25:26:69.20:1096,69,0	1/1:1,19:21:54.18:898,54,0	1/1:0,6:6:18.06:300,18,0
chr10	25803285	.	TG	T	1233.30	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-7.713;DP=483;FS=4.415;HRun=4;HaplotypeScore=87.2822;InbreedingCoeff=0.9112;MQ=80.60;MQ0=4;MQRankSum=2.487;QD=15.61;ReadPosRankSum=-1.504;VQSLOD=2.9285;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:23,3:25:24.18:235,24,0	0/0:9,0:9:23.37:0,23,210	0/0:36,0:18:39.59:0,40,347	0/0:28,0:17:5.21:0,5,243	0/0:17,0:18:48.95:0,49,445	0/0:22,0:23:58.69:0,59,616	0/0:15,0:16:43.73:0,44,435	1/1:10,27:37:89.93:849,90,0	0/0:14,0:14:39.05:0,39,440	0/0:14,0:14:36.70:0,37,328	0/0:12,0:12:34.16:0,34,298	0/0:8,0:8:12.01:0,12,122	0/0:11,0:11:30.44:0,30,296	0/0:13,0:13:36.63:0,37,338	0/0:14,0:15:42.07:0,42,455	0/0:22,0:23:59.37:0,59,554	1/1:3,13:16:27.06:291,27,0	0/0:12,0:13:34.33:0,34,327	0/0:13,0:13:26.24:0,26,253	0/0:19,0:20:55.52:0,56,522	0/0:21,0:22:55.66:0,56,524	0/0:11,0:11:29.38:0,29,284	0/0:19,0:19:53.82:0,54,541	0/0:13,0:13:37.79:0,38,373	0/0:10,0:11:25.69:0,26,257	0/0:21,0:21:55.80:0,56,566	0/0:16,0:16:42.28:0,42,422	0/0:4,0:4:6.02:0,6,72
chr10	25803922	.	A	AT	1300.28	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=2.852;DP=554;FS=8.124;HRun=8;HaplotypeScore=59.3261;InbreedingCoeff=0.7469;MQ=72.23;MQ0=0;MQRankSum=-0.803;QD=22.42;ReadPosRankSum=-0.272;VQSLOD=3.6633;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,32:35:90.27:1038,90,0	0/0:6,0:6:18.01:0,18,165	0/0:8,0:8:4.54:0,5,123	0/1:11,0:11:6.67:7,0,17	0/0:34,0:34:89.98:0,90,808	0/0:26,0:26:75.04:0,75,686	0/0:19,0:19:53.99:0,54,484	0/0:32,0:32:78.01:0,78,711	0/0:20,0:20:45.02:0,45,412	0/0:29,0:29:69.02:0,69,631	0/0:25,0:25:66.02:0,66,597	0/0:16,0:16:38.99:0,39,348	0/0:21,0:21:60.03:0,60,549	0/0:19,0:19:42.02:0,42,384	1/1:1,11:12:33.10:381,33,0	0/0:12,0:12:33:0,33,298	0/0:22,0:22:63:0,63,569	0/0:12,0:12:36.02:0,36,329	0/0:16,0:16:38.98:0,39,350	0/0:31,0:31:87.02:0,87,791	0/0:6,0:6:9:0,9,82	0/0:18,0:18:51.03:0,51,467	0/0:21,0:21:60.03:0,60,549	0/0:15,0:15:41.99:0,42,374	0/0:24,0:24:66.01:0,66,599	0/0:33,0:33:93.03:0,93,846	0/0:22,0:22:51.02:0,51,467	0/0:9,0:9:27:0,27,240
chr10	25805868	.	A	AT	12914.57	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-4.987;DP=577;FS=6.657;HRun=9;HaplotypeScore=61.2771;InbreedingCoeff=0.9788;MQ=67.53;MQ0=0;MQRankSum=-4.536;QD=23.35;ReadPosRankSum=4.402;VQSLOD=5.6179;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:28:60.32:312,60,0	1/1:1,12:13:26.27:356,26,0	0/0:13,0:10:17.91:0,18,147	0/0:11,0:10:14.13:0,14,176	1/1:4,26:32:58.19:815,58,0	1/1:1,18:19:36.10:398,36,0	1/1:1,15:16:36.10:398,36,0	1/1:7,0:32:68.61:344,69,0	1/1:0,14:15:35.93:379,36,0	1/1:6,21:27:63.14:679,63,0	1/1:4,22:26:40.12:663,40,0	1/1:4,12:16:36.10:398,36,0	1/1:2,14:16:27.07:299,27,0	1/1:2,23:25:63.17:697,63,0	1/1:4,19:24:56.99:612,57,0	1/1:2,22:24:57.15:631,57,0	1/1:4,0:14:17.18:87,17,0	1/1:3,17:20:42.11:465,42,0	1/1:2,13:15:38.57:390,39,0	1/1:5,29:34:61.14:874,61,0	1/1:1,20:21:45.12:498,45,0	1/1:2,12:14:33.09:365,33,0	1/1:1,21:22:51.13:562,51,0	1/1:0,14:14:36.10:398,36,0	1/1:2,19:21:45.12:498,45,0	1/1:3,16:20:48.10:518,48,0	1/1:5,24:30:75.16:814,75,0	1/1:0,14:14:42.11:465,42,0
chr10	25806282	.	CA	C	1237.09	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.015;DP=553;FS=3.657;HRun=7;HaplotypeScore=50.7990;InbreedingCoeff=0.9753;MQ=74.22;MQ0=0;MQRankSum=1.020;QD=22.49;ReadPosRankSum=-3.805;VQSLOD=1.9492;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:35.81:0,36,409	0/0:12,0:12:24.08:0,24,302	0/0:13,0:13:18.04:0,18,195	0/0:8,0:8:12.04:0,12,151	0/0:23,0:23:63.19:0,63,779	0/0:26,0:26:72.22:0,72,894	0/0:15,0:15:42.12:0,42,515	1/1:6,37:43:99:1083,108,0	0/0:18,0:18:51.16:0,51,638	0/0:38,0:38:99:0,99,1245	0/0:21,0:21:54.17:0,54,679	0/0:17,0:17:42.13:0,42,523	0/0:13,0:13:30.09:0,30,364	0/0:19,0:19:54.16:0,54,664	0/0:17,0:17:39.12:0,39,491	0/0:28,0:28:72.20:0,72,869	1/1:1,11:12:27.06:275,27,0	0/0:18,0:18:39.12:0,39,489	0/0:25,0:25:69.22:0,69,868	0/0:25,0:25:75.23:0,75,930	0/0:11,0:11:27.09:0,27,340	0/0:24,0:24:60.19:0,60,755	0/0:24,0:24:66.20:0,66,814	0/0:10,0:10:27.09:0,27,340	0/0:23,0:23:69.22:0,69,868	0/0:19,0:19:48.15:0,48,591	0/0:29,0:29:78.24:0,78,969	0/0:7,0:7:21.07:0,21,264
chr10	25806514	.	CT	C	139.27	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.066;DP=460;FS=3.821;HRun=1;HaplotypeScore=62.5363;InbreedingCoeff=0.9623;MQ=74.04;MQ0=4;MQRankSum=-1.590;QD=19.90;ReadPosRankSum=0.313;VQSLOD=3.7863;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,7:7:18.02:230,18,0	0/0:8,0:8:24.08:0,24,383	0/0:26,0:16:42.28:0,42,575	0/0:39,0:27:54.71:0,55,784	0/0:12,0:12:36.12:0,36,575	0/0:20,0:20:60.20:0,60,957	0/0:23,0:23:69.22:0,69,1066	0/0:34,0:34:99:0,99,1536	0/0:17,0:17:51.17:0,51,814	0/0:16,0:16:45.15:0,45,717	0/0:7,0:7:21.07:0,21,322	0/0:23,0:23:69.24:0,69,1099	0/0:12,0:12:36.12:0,36,569	0/0:20,0:20:60.19:0,60,932	0/0:22,0:22:63.21:0,63,1003	0/0:20,0:20:60.19:0,60,929	0/0:18,0:18:51.17:0,51,815	0/0:18,0:17:51.17:0,51,802	0/0:18,0:17:51.17:0,51,816	0/0:9,0:9:27.09:0,27,418	0/0:18,0:18:54.18:0,54,863	0/0:7,0:7:21.07:0,21,336	0/0:8,0:8:24.07:0,24,361	0/0:18,0:18:51.16:0,51,791	0/0:9,0:9:27.07:0,27,407	0/0:11,0:11:33.11:0,33,528	0/0:15,0:15:42.14:0,42,668	0/0:5,0:5:15.05:0,15,240
chr10	25806532	.	G	GTC	1570.50	PASS	AB=0.682;AC=5;AF=0.089;AN=56;BaseQRankSum=-4.390;DP=483;FS=8.769;HRun=0;HaplotypeScore=79.8988;InbreedingCoeff=0.6896;MQ=71.04;MQ0=10;MQRankSum=-4.050;QD=22.76;ReadPosRankSum=-0.415;VQSLOD=3.4782;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:10:18.06:0,18,220	0/0:8,0:9:20.90:0,21,233	0/0:41,0:21:5.21:0,5,206	0/0:48,0:30:15.34:0,15,242	0/0:11,0:11:30.09:0,30,355	0/0:20,0:20:50.60:0,51,578	0/0:21,0:22:35.92:0,36,402	1/1:15,18:33:57.60:755,58,0	0/0:17,0:17:42.13:0,42,513	0/0:13,0:13:36.10:0,36,428	0/0:10,0:10:24.07:0,24,293	0/0:23,0:23:48.15:0,48,586	0/0:13,0:13:36.09:0,36,425	0/0:22,0:22:63.18:0,63,756	1/1:3,16:20:36.12:584,36,0	0/0:15,0:16:35.94:0,36,417	0/1:8,7:15:9.56:361,0,10	0/0:18,0:17:42.13:0,42,513	0/0:22,0:21:29.18:0,29,275	0/0:6,0:7:14.88:0,15,160	0/0:21,0:21:48.13:0,48,573	0/0:5,0:5:15.05:0,15,183	0/0:7,0:7:21.04:0,21,232	0/0:18,0:19:41.96:0,42,490	0/0:10,0:10:18.06:0,18,220	0/0:10,0:11:20.90:0,21,234	0/0:11,0:11:33.10:0,33,403	0/0:5,0:5:3.01:0,3,37
chr10	25806592	.	CAGAA	C	829.16	PASS	AC=4;AF=0.074;AN=54;BaseQRankSum=-1.538;DP=411;FS=0.000;HRun=0;HaplotypeScore=106.8273;InbreedingCoeff=0.9647;MQ=73.09;MQ0=3;MQRankSum=1.364;QD=30.71;ReadPosRankSum=-4.094;VQSLOD=2.5487;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:8:24:0,24,462	0/0:6,0:6:18.06:0,18,486	0/0:20,0:12:21.07:0,21,384	0/0:34,0:25:13.92:0,14,308	0/0:8,0:8:20.90:0,21,469	0/0:20,0:20:54.11:0,54,1316	0/0:12,0:12:33.09:0,33,768	1/1:0,19:19:51.08:663,51,0	0/0:11,0:11:33.09:0,33,833	0/0:19,0:19:57.16:0,57,1387	0/0:15,0:15:39.08:0,39,962	0/0:19,0:19:54.14:0,54,1347	0/0:14,0:14:39.13:0,39,990	0/0:18,0:18:54.17:0,54,1401	0/0:28,0:28:69.06:0,69,1531	0/0:15,0:15:42.12:0,42,997	1/1:1,7:8:15.05:284,15,0	0/0:22,0:22:63.20:0,63,1509	0/0:9,0:9:18.52:0,19,400	0/0:11,0:11:33.01:0,33,825	0/0:13,0:13:36.11:0,36,917	0/0:11,0:11:33.11:0,33,861	0/0:11,0:11:24.07:0,24,591	0/0:14,0:14:36.12:0,36,941	0/0:13,0:13:38.99:0,39,840	0/0:7,0:7:21.07:0,21,567	0/0:24,0:24:66.23:0,66,1749	./.
chr10	25806654	.	AATATAT	A	320.22	PASS	AB=0.808;AC=26;AF=0.650;AN=40;BaseQRankSum=0.395;DP=194;FS=12.411;HRun=0;HaplotypeScore=71.6833;InbreedingCoeff=0.1652;MQ=67.66;MQ0=0;MQRankSum=-1.261;QD=2.62;ReadPosRankSum=3.325;VQSLOD=0.4965;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:7,0:6:1.71:0,2,57	0/0:6,0:4:3.01:0,3,46	0/1:3,1:8:0.01:0,0,13	1/1:2,2:6:0.89:2,1,0	./.	0/1:21,0:20:77.75:78,0,124	0/0:5,1:9:1.57:0,2,80	1/1:5,2:7:6.91:128,7,0	1/1:3,3:9:1.77:3,2,0	./.	1/1:1,1:3:1.25:3,1,0	1/1:5,0:6:0.89:2,1,0	./.	0/1:7,0:6:21.11:21,0,30	0/1:3,0:8:10:10,0,51	1/1:7,0:8:5.71:70,6,0	1/1:5,1:6:3.01:63,3,0	0/0:3,0:5:3.01:0,3,39	./.	./.	./.	0/0:6,0:7:6.02:0,6,89	1/1:6,2:10:0.88:2,1,0	1/1:3,0:3:0.89:2,1,0	1/1:11,2:14:1.77:3,2,0	1/1:2,0:3:3.59:43,4,0
chr10	25807080	.	AACACACACACACACAC	A	2314.54	PASS	AB=0.699;AC=22;AF=0.550;AN=40;BaseQRankSum=3.132;DP=447;FS=20.389;HRun=0;HaplotypeScore=162.8987;InbreedingCoeff=0.4533;MQ=50.90;MQ0=23;MQRankSum=-1.345;QD=15.96;ReadPosRankSum=2.853;VQSLOD=1.5437;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:25:18.06:0,18,713	./.	./.	0/0:35,0:17:3.01:0,3,67	./.	1/1:8,4:11:6.02:129,6,0	0/0:17,2:18:1.38:0,1,88	0/0:25,0:22:21.07:0,21,720	0/0:11,0:10:3:0,3,25	1/1:11,1:12:9.03:232,9,0	./.	1/1:9,2:12:9.03:303,9,0	1/1:7,1:9:2.71:89,3,0	1/1:13,4:16:3.01:122,3,0	0/0:15,0:15:12.04:0,12,256	./.	0/0:21,0:19:15.04:0,15,536	1/1:4,0:8:3.01:123,3,0	1/1:11,1:10:3.01:130,3,0	1/1:8,1:9:6.02:150,6,0	./.	0/1:4,5:10:50.81:51,0,68	./.	0/0:17,1:16:0.47:0,0,1	./.	0/1:19,1:24:0.01:584,0,0	1/1:6,5:10:12.04:517,12,0	1/1:2,0:2:2.98:22,3,0
chr10	25807226	.	CT	C	1034.27	PASS	AB=0.911;AC=8;AF=0.143;AN=56;BaseQRankSum=-5.086;DP=581;FS=7.264;HRun=11;HaplotypeScore=104.9887;InbreedingCoeff=0.3974;MQ=78.01;MQ0=0;MQRankSum=1.182;QD=7.18;ReadPosRankSum=-1.170;VQSLOD=1.9434;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,1:35:47.29:0,47,652	0/0:14,1:15:11.42:0,11,308	0/1:19,2:21:19.68:20,0,179	0/1:16,0:16:5.38:5,0,126	0/0:28,0:28:66.10:0,66,685	0/1:16,2:18:4.39:4,0,330	0/0:18,1:19:20.45:0,20,414	1/1:11,25:36:39.83:523,40,0	0/0:15,1:15:11.41:0,11,302	0/0:15,1:16:14.43:0,14,345	0/0:19,0:20:38.89:0,39,384	0/0:18,0:18:34.07:0,34,371	0/0:15,0:19:46.13:0,46,427	0/0:15,0:16:41.97:0,42,426	0/0:8,0:22:25.93:0,26,164	0/0:18,0:18:42.11:0,42,447	1/1:3,22:28:71.97:553,72,0	0/0:16,0:16:45.11:0,45,480	0/1:17,5:24:69.70:70,0,299	0/0:24,2:27:28.74:0,29,688	0/0:15,0:17:33.01:0,33,330	0/0:14,1:15:7.13:0,7,254	0/0:14,1:15:14.45:0,14,357	0/0:18,2:21:7.66:0,8,454	0/0:21,0:22:63.10:0,63,636	0/0:24,1:28:35.15:0,35,538	0/0:31,0:30:90.12:0,90,909	0/0:1,0:2:5.83:0,6,33
chr10	25808808	.	GCA	G	5245.39	PASS	AB=1.000;AC=50;AF=0.893;AN=56;BaseQRankSum=-2.944;DP=322;FS=3.092;HRun=0;HaplotypeScore=56.7645;InbreedingCoeff=0.4198;MQ=66.58;MQ0=18;MQRankSum=2.543;QD=18.40;ReadPosRankSum=4.290;VQSLOD=4.3879;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,21:24:6.02:78,6,0	1/1:2,1:3:9.03:116,9,0	0/0:36,0:13:9.49:0,9,98	0/1:31,0:5:3.19:3,0,13	1/1:7,0:7:11.57:104,12,0	1/1:7,9:15:2.91:41,3,0	1/1:8,1:9:15.04:176,15,0	1/1:15,1:13:31.82:444,32,0	1/1:11,0:10:27.06:328,27,0	1/1:9,0:8:11.30:146,11,0	1/1:6,0:6:18.06:230,18,0	1/1:8,0:8:14.95:146,15,0	1/1:6,0:5:14.94:162,15,0	1/1:4,0:4:9.03:116,9,0	1/1:7,0:5:11.57:106,12,0	1/1:11,0:10:20.91:214,21,0	1/1:15,0:15:32.06:350,32,0	1/1:14,0:14:38.66:376,39,0	1/1:9,0:9:27.08:324,27,0	0/1:2,0:2:0.59:33,0,1	1/1:30,1:29:59.05:637,59,0	1/1:2,0:2:3.01:39,3,0	1/1:4,0:4:11.84:111,12,0	1/1:20,0:19:42.01:509,42,0	0/0:1,0:1:0.47:0,0,1	1/1:6,0:6:15.05:194,15,0	1/1:8,1:9:18.03:199,18,0	1/1:3,0:3:6.01:64,6,0
chr10	25808817	.	CACCA	C	4559.96	PASS	AB=0.950;AC=34;AF=0.607;AN=56;BaseQRankSum=-7.993;DP=369;FS=28.012;HRun=0;HaplotypeScore=73.5194;InbreedingCoeff=-0.1512;MQ=53.43;MQ0=31;MQRankSum=0.912;QD=14.34;ReadPosRankSum=5.199;VQSLOD=2.5936;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:24:4.16:24,0,4	1/1:4,0:4:4.57:78,5,0	0/0:30,0:7:9.01:0,9,98	0/1:29,0:3:3.19:3,0,13	1/1:5,0:5:11.57:104,12,0	0/0:17,0:14:8.87:0,9,75	0/1:12,3:15:44.07:215,0,44	1/1:18,0:15:22.64:434,23,0	1/1:12,0:10:20.11:325,20,0	0/1:9,0:8:0.23:111,0,0	1/1:7,0:7:18.06:230,18,0	0/1:10,1:11:42.59:123,0,43	0/1:7,1:6:6.35:175,0,6	0/1:7,0:7:20.51:103,0,21	0/1:10,0:8:19.17:28,0,19	0/1:9,1:9:24.49:186,0,24	1/1:15,0:14:32.22:349,32,0	0/1:17,1:18:72.73:275,0,73	1/1:14,0:12:21.43:349,21,0	0/1:2,0:2:21.01:32,0,21	0/1:35,3:34:99:451,0,120	0/1:4,0:4:26.88:33,0,27	0/1:5,1:6:1.40:102,0,1	1/1:23,0:20:12.04:516,12,0	0/0:4,0:4:4.54:0,5,27	1/1:7,0:7:13.82:192,14,0	0/1:9,0:9:6.85:94,0,7	0/1:9,0:7:28.77:29,0,66
chr10	25808818	.	AC	A	549.46	PASS	AB=0.977;AC=18;AF=0.321;AN=56;BaseQRankSum=4.624;DP=380;FS=0.000;HRun=2;HaplotypeScore=76.3988;InbreedingCoeff=-0.1150;MQ=52.90;MQ0=35;MQRankSum=1.313;QD=2.50;ReadPosRankSum=2.410;VQSLOD=-0.5077;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:24:4.71:0,5,13	0/1:4,0:4:0.55:27,0,1	0/0:30,0:7:11.65:0,12,119	0/0:29,0:3:5.98:0,6,52	0/0:6,0:6:2.62:0,3,28	0/1:16,1:14:6.81:82,0,7	0/1:15,1:16:14.67:51,0,15	0/0:17,0:14:17.04:0,17,93	1/1:12,0:10:1.45:39,1,0	0/1:8,0:7:24.50:25,0,64	0/0:7,0:7:4.07:0,4,11	1/1:11,0:11:5.37:82,5,0	0/0:8,0:6:3.43:0,3,44	0/0:8,0:8:7.90:0,8,80	0/1:11,1:8:22.37:93,0,22	1/1:11,0:9:0.96:33,1,0	0/1:16,0:15:3.82:4,0,38	0/1:18,0:18:22:48,0,22	0/1:15,0:13:18.42:18,0,24	0/0:3,0:3:4.09:0,4,16	0/1:38,2:35:72.09:83,0,72	0/0:3,1:4:3.48:0,3,42	0/1:6,0:6:0.45:27,0,0	0/1:23,1:21:33.67:70,0,34	0/0:2,1:4:0.71:0,1,8	0/0:7,0:7:8.37:0,8,75	0/0:10,0:9:0.60:0,1,20	0/1:9,0:7:9.36:9,0,58
chr10	25808819	.	C	CA	981.02	PASS	AB=0.941;AC=24;AF=0.429;AN=56;BaseQRankSum=4.476;DP=388;FS=0.000;HRun=1;HaplotypeScore=78.2202;InbreedingCoeff=-0.2370;MQ=52.39;MQ0=37;MQRankSum=3.188;QD=3.82;ReadPosRankSum=1.521;VQSLOD=0.1765;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:25:6.35:0,6,38	0/1:4,0:4:12.78:25,0,13	0/0:29,0:6:11.82:0,12,119	0/0:29,0:3:5.98:0,6,52	0/0:6,0:6:0.41:0,0,25	0/1:17,0:14:12.53:86,0,13	0/1:15,1:16:18.70:55,0,19	0/0:18,0:15:20.24:0,20,109	0/1:11,1:10:1.87:55,0,2	0/1:8,0:7:24.54:25,0,64	0/0:7,0:7:4.07:0,4,11	1/1:9,2:11:12.14:115,12,0	0/1:8,0:6:6.29:6,0,39	0/0:9,0:9:7.90:0,8,80	0/1:12,0:8:28.17:57,0,28	1/1:8,3:9:3.85:94,4,0	0/1:17,0:15:3.82:4,0,38	0/1:16,2:18:22.23:126,0,22	0/1:14,1:13:27.38:47,0,27	1/1:4,0:4:0.53:3,1,0	0/1:36,7:37:57.47:184,0,57	0/0:4,0:4:3.48:0,3,41	1/1:7,0:7:4.93:52,5,0	0/1:20,3:20:34.55:124,0,35	0/1:3,0:4:0.07:0,0,3	0/1:8,0:8:22.35:22,0,64	0/1:9,1:9:20.40:20,0,40	0/1:8,1:7:32.18:32,0,58
chr10	25808859	.	A	ACG	4868.12	PASS	AB=0.986;AC=40;AF=0.741;AN=54;BaseQRankSum=-2.918;DP=381;FS=27.084;HRun=0;HaplotypeScore=65.2260;InbreedingCoeff=0.4260;MQ=55.43;MQ0=35;MQRankSum=2.561;QD=17.45;ReadPosRankSum=3.884;VQSLOD=3.0421;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:24:41.95:0,42,379	1/1:6,0:6:15.82:149,16,0	0/0:14,0:8:17.83:0,18,167	0/0:26,0:10:19.32:0,19,246	1/1:1,8:9:3.01:34,3,0	1/1:14,0:12:30.90:330,31,0	0/1:16,1:16:21:265,0,21	0/0:16,0:14:36.24:0,36,199	1/1:7,0:6:4.65:161,5,0	0/1:18,0:16:30.98:245,0,31	./.	1/1:12,0:13:29.43:397,29,0	0/1:5,0:3:10.68:60,0,11	1/1:8,0:8:4.28:83,4,0	1/1:7,5:8:2.83:115,3,0	1/1:11,0:10:27.03:333,27,0	0/0:14,0:12:20.56:0,21,124	1/1:20,0:19:10.96:387,11,0	1/1:15,1:14:38.29:389,38,0	1/1:2,5:6:0.82:54,1,0	1/1:44,0:39:48.51:667,49,0	1/1:7,0:7:0.50:42,1,0	1/1:6,0:6:12.02:172,12,0	1/1:15,0:14:25.33:396,25,0	1/1:6,1:7:7.98:124,8,0	0/1:11,0:10:14.09:156,0,14	1/1:4,7:10:6.14:116,6,0	1/1:13,0:9:13.80:195,14,0
chr10	25808980	.	AT	A	525.41	PASS	AC=26;AF=0.765;AN=34;BaseQRankSum=-3.387;DP=72;FS=11.832;HRun=2;HaplotypeScore=17.4477;InbreedingCoeff=0.4235;MQ=92.03;MQ0=4;MQRankSum=-1.553;QD=16.42;ReadPosRankSum=-0.842;VQSLOD=1.5969;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:3:8.96:0,9,100	1/1:0,1:1:3.01:38,3,0	0/0:9,0:6:11.99:0,12,120	0/0:25,0:7:11.75:0,12,132	./.	1/1:1,0:1:2.99:24,3,0	./.	1/1:1,4:5:12.04:152,12,0	1/1:2,0:2:5.99:49,6,0	1/1:1,0:1:3.01:39,3,0	./.	0/0:0,1:1:0:0,0,0	1/1:0,1:1:3.01:38,3,0	./.	1/1:1,0:1:3:25,3,0	./.	1/1:9,1:8:7.74:40,8,0	1/1:3,0:3:3.01:38,3,0	1/1:0,2:2:6.02:76,6,0	./.	1/1:1,0:1:3:25,3,0	./.	1/1:1,0:1:3:25,3,0	./.	1/1:1,2:3:3.39:72,3,0	./.	./.	./.
chr10	25808981	.	T	TA	632.73	PASS	AB=1.000;AC=26;AF=0.813;AN=32;BaseQRankSum=-3.215;DP=74;FS=8.712;HRun=1;HaplotypeScore=16.0530;InbreedingCoeff=0.2944;MQ=81.30;MQ0=4;MQRankSum=-1.477;QD=16.65;ReadPosRankSum=0.295;VQSLOD=2.7418;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:6,0:4:2.95:3,0,51	1/1:1,0:1:3.01:38,3,0	0/0:8,0:5:11.99:0,12,116	0/0:24,0:6:12.49:0,12,134	./.	1/1:1,0:1:2.99:24,3,0	./.	1/1:5,0:5:12.04:154,12,0	1/1:2,0:2:5.99:49,6,0	1/1:0,1:1:3.01:39,3,0	./.	./.	1/1:1,0:1:3.01:38,3,0	./.	1/1:1,0:1:3:25,3,0	./.	1/1:1,9:8:9.03:141,9,0	1/1:0,3:3:3.01:38,3,0	1/1:2,0:2:6.02:76,6,0	./.	1/1:1,0:1:3:25,3,0	./.	1/1:1,0:1:3:25,3,0	./.	0/1:3,0:3:1.12:68,0,1	./.	./.	./.
chr10	25809881	.	AG	A	20116.35	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=7.438;DP=639;FS=6.132;HRun=1;HaplotypeScore=66.8030;InbreedingCoeff=0.9991;MQ=73.23;MQ0=0;MQRankSum=-3.373;QD=38.39;ReadPosRankSum=6.295;VQSLOD=4.9809;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,27:27:75.25:1048,75,0	1/1:0,10:10:30.10:420,30,0	0/0:14,0:14:29.52:0,30,479	0/0:10,0:10:25.87:0,26,338	1/1:0,33:33:93.27:1278,93,0	1/1:0,20:20:54.18:755,54,0	1/1:0,23:23:60.20:839,60,0	0/0:45,0:45:99:0,132,2064	1/1:0,24:24:63.21:880,63,0	1/1:0,40:40:99:1660,120,0	1/1:0,34:34:96.32:1342,96,0	1/1:0,14:14:36.12:503,36,0	1/1:0,20:20:50.83:713,51,0	1/1:0,20:20:51.17:713,51,0	0/0:19,0:19:57.17:0,57,865	1/1:0,25:25:69.23:965,69,0	0/0:27,0:27:81.26:0,81,1271	1/1:2,10:12:36.12:500,36,0	1/1:0,22:22:66.19:888,66,0	1/1:0,34:34:99:1397,102,0	1/1:0,20:20:57.19:797,57,0	1/1:0,18:18:42.10:565,42,0	1/1:0,23:23:63.21:881,63,0	1/1:0,15:15:36.12:504,36,0	1/1:0,25:25:66.22:923,66,0	1/1:1,28:29:84.27:1159,84,0	1/1:0,27:27:72.24:1007,72,0	1/1:0,9:9:27.09:378,27,0
chr10	25810349	.	T	TGCG	3966.69	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-11.325;DP=656;FS=12.161;HRun=0;HaplotypeScore=94.6753;InbreedingCoeff=0.9962;MQ=87.45;MQ0=1;MQRankSum=-4.523;QD=57.49;ReadPosRankSum=-2.215;VQSLOD=4.4383;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,126,1986	0/0:12,0:12:36.12:0,36,600	0/0:34,0:34:78.73:0,79,1263	0/0:27,0:26:60.19:0,60,952	0/0:26,0:26:78.23:0,78,1247	0/0:20,0:20:60.21:0,60,994	0/0:20,0:20:60.21:0,60,995	1/1:5,29:37:99:2070,105,0	0/0:11,0:11:24.08:0,24,400	0/0:27,0:27:78.26:0,78,1276	0/0:23,0:23:63.21:0,63,1040	0/0:22,0:22:66.18:0,66,1034	0/0:9,0:9:27.09:0,27,450	0/0:19,0:19:57.18:0,57,908	0/0:27,0:27:78.24:0,78,1272	0/0:23,0:23:66.21:0,66,1074	1/1:2,30:32:84.29:1897,84,0	0/0:22,0:22:60.18:0,60,967	0/0:29,0:29:81.28:0,81,1341	0/0:25,0:25:75.26:0,75,1249	0/0:26,0:26:72.25:0,72,1174	0/0:13,0:13:36.12:0,36,591	0/0:22,0:22:66.21:0,66,1069	0/0:22,0:22:60.18:0,60,964	0/0:16,0:16:45.15:0,45,750	0/0:31,0:31:81.28:0,81,1338	0/0:30,0:30:87.28:0,87,1419	0/0:8,0:8:21.07:0,21,350
chr10	25810513	.	CT	C	18268.16	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=5.362;DP=675;FS=1.213;HRun=3;HaplotypeScore=79.1562;InbreedingCoeff=0.9953;MQ=69.35;MQ0=2;MQRankSum=-3.208;QD=33.83;ReadPosRankSum=6.162;VQSLOD=4.9095;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,52:54:99:1792,121,0	1/1:1,19:20:48.15:595,48,0	0/0:28,1:22:57.19:0,57,791	0/0:30,1:26:71.81:0,72,956	1/1:1,32:33:93.25:1135,93,0	1/1:0,19:19:54.17:669,54,0	1/1:1,24:25:66.16:801,66,0	0/0:38,0:38:99:0,102,1469	1/1:2,26:28:72.23:892,72,0	1/1:0,13:13:39.06:452,39,0	1/1:0,19:19:57.18:706,57,0	1/1:0,32:32:84.26:1041,84,0	1/1:1,21:22:57.18:707,57,0	1/1:0,11:11:30.09:372,30,0	1/1:0,25:25:72.23:893,72,0	1/1:2,23:25:60.19:744,60,0	0/0:37,0:36:99:0,111,1580	1/1:0,21:21:63.20:781,63,0	1/1:2,23:25:69.18:836,69,0	1/1:1,22:23:66.21:818,66,0	1/1:0,23:23:63.20:781,63,0	1/1:2,16:18:39.12:484,39,0	1/1:0,20:20:60.19:744,60,0	1/1:1,18:19:54.17:669,54,0	1/1:0,10:10:30.09:372,30,0	1/1:0,15:15:45.12:533,45,0	1/1:0,35:35:99:1264,102,0	1/1:0,5:5:15.05:186,15,0
chr10	25810956	.	TTA	T	2310.81	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=12.423;DP=449;FS=10.217;HRun=0;HaplotypeScore=125.2551;InbreedingCoeff=0.8992;MQ=68.92;MQ0=0;MQRankSum=-3.611;QD=6.23;ReadPosRankSum=5.175;VQSLOD=2.5655;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,23:24:57.15:824,57,0	1/1:4,0:4:7.63:32,8,0	0/0:10,0:10:23.93:0,24,308	0/0:8,0:8:24.04:0,24,314	1/1:27,0:27:42.36:125,42,0	1/1:16,0:16:23.32:62,23,0	1/1:6,0:6:4.66:13,5,0	0/0:36,0:36:99:0,102,1672	1/1:12,0:12:15.55:41,16,0	1/1:16,0:16:28.29:109,28,0	1/1:17,0:17:26.96:71,27,0	1/1:14,0:14:21.77:58,22,0	1/1:15,1:16:24.78:103,25,0	1/1:11,0:11:13.99:37,14,0	1/1:16,0:15:20.74:55,21,0	1/1:11,0:11:17.49:58,17,0	0/0:24,0:24:72.24:0,72,1274	1/1:13,0:13:15.55:41,16,0	1/1:16,0:16:29.61:122,30,0	1/1:28,0:28:45.66:147,46,0	1/1:10,0:10:14.26:38,14,0	1/1:17,0:17:32.60:134,33,0	1/1:22,0:22:29.74:79,30,0	1/1:7,0:7:9.33:25,9,0	1/1:12,0:12:18.92:50,19,0	1/1:18,0:18:29.38:94,29,0	1/1:30,0:30:43.10:114,43,0	1/1:8,0:8:12.31:46,12,0
chr10	25810957	.	TA	T	13335.33	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=10.230;DP=441;FS=10.162;HRun=1;HaplotypeScore=77.4709;InbreedingCoeff=0.9696;MQ=69.11;MQ0=0;MQRankSum=-4.586;QD=36.64;ReadPosRankSum=5.017;VQSLOD=4.7005;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:23:53.09:274,53,0	1/1:0,4:4:12:146,12,0	0/0:9,0:9:23.89:0,24,275	0/0:9,0:9:21.15:0,21,268	1/1:0,26:26:78.22:1067,78,0	1/1:0,16:16:45.15:627,45,0	1/1:0,5:5:9.03:126,9,0	0/0:35,0:35:99:0,102,1409	1/1:0,11:11:30.10:419,30,0	1/1:0,16:16:48.13:635,48,0	1/1:0,17:17:51.17:711,51,0	1/1:0,14:14:42.14:587,42,0	1/1:1,15:16:45.02:601,45,0	1/1:0,10:10:27.09:377,27,0	1/1:0,15:14:39.13:544,39,0	1/1:1,10:11:30.06:396,30,0	0/0:24,0:24:72.12:0,72,1000	1/1:0,12:12:30.10:418,30,0	1/1:0,16:16:48.01:611,48,0	1/1:0,28:28:84.21:1127,84,0	1/1:0,10:10:27.09:377,27,0	1/1:0,17:17:50.99:623,51,0	1/1:0,22:22:57.19:795,57,0	1/1:0,7:7:18.06:252,18,0	1/1:0,12:12:36.12:502,36,0	1/1:0,18:18:54.15:720,54,0	1/1:0,30:30:81.27:1130,81,0	1/1:0,8:8:21.04:272,21,0
chr10	25811129	.	T	TG	4353.54	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-3.028;DP=408;FS=0.604;HRun=3;HaplotypeScore=71.3848;InbreedingCoeff=0.7950;MQ=76.77;MQ0=1;MQRankSum=-0.640;QD=14.18;ReadPosRankSum=2.696;VQSLOD=4.1123;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,10:11:3.01:40,3,0	1/1:7,2:9:25.04:219,25,0	0/0:27,0:11:6.41:0,6,74	0/0:21,0:14:20.18:0,20,171	1/1:27,0:27:40.64:321,41,0	1/1:20,4:24:50.33:398,50,0	1/1:8,0:8:13.86:73,14,0	0/0:36,0:35:54.94:0,55,345	1/1:5,0:5:14.67:113,15,0	1/1:12,0:12:25.81:168,26,0	1/1:11,0:11:26.33:137,26,0	1/1:9,0:9:19.62:136,20,0	1/1:7,0:7:11.40:79,11,0	1/1:9,0:9:23.90:211,24,0	1/1:7,0:7:2.98:22,3,0	1/1:6,0:6:2.53:58,3,0	0/0:16,0:15:16.43:0,16,110	1/1:14,0:14:28.67:217,29,0	1/1:12,11:23:35.96:306,36,0	1/1:27,0:27:65.87:348,66,0	1/1:12,0:12:25.24:165,25,0	1/1:6,1:7:13.49:80,13,0	1/1:11,0:11:17:165,17,0	1/1:7,0:7:15:131,15,0	1/1:13,0:13:35.15:214,35,0	1/1:18,0:18:42.23:314,42,0	1/1:24,0:24:50.58:361,51,0	1/1:6,0:6:11.66:76,12,0
chr10	25811728	.	T	TG	2774.05	PASS	AB=0.995;AC=25;AF=0.446;AN=56;BaseQRankSum=-4.006;DP=551;FS=44.677;HRun=0;HaplotypeScore=80.8212;InbreedingCoeff=-0.4310;MQ=57.31;MQ0=23;MQRankSum=4.598;QD=7.09;ReadPosRankSum=6.183;VQSLOD=1.6071;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,18:36:1.04:0,1,220	0/1:14,0:13:49.97:90,0,50	0/0:37,0:7:11.59:0,12,113	0/0:26,0:13:8.09:0,8,82	0/1:41,0:39:99:209,0,145	0/1:14,0:13:86.42:86,0,95	1/1:12,0:12:0.26:108,0,0	0/0:23,0:21:50.76:0,51,410	0/1:16,0:16:32.15:202,0,32	0/1:25,0:21:53.26:185,0,53	0/1:13,1:14:27.84:121,0,28	0/1:8,0:6:5.67:69,0,6	0/1:15,0:15:1.18:176,0,1	0/1:17,0:16:17.51:197,0,18	0/0:10,0:10:27.78:0,28,226	0/1:14,0:14:63.44:63,0,119	0/0:26,0:26:70.93:0,71,564	1/1:14,0:13:0.33:106,0,0	0/1:27,0:25:99:156,0,202	0/1:30,0:28:99:201,0,173	1/1:5,0:5:14.88:110,15,0	0/1:14,0:13:23.33:145,0,23	0/1:10,0:9:41.34:41,0,59	0/1:8,0:8:10.71:21,0,11	0/1:24,0:21:91.45:164,0,91	0/1:28,0:28:99:205,0,186	0/1:26,0:26:99:201,0,99	0/1:14,0:8:16.53:73,0,17
chr10	25811752	.	TGC	T	3842.85	PASS	AB=0.781;AC=44;AF=0.786;AN=56;BaseQRankSum=6.051;DP=363;FS=2.622;HRun=0;HaplotypeScore=50.4535;InbreedingCoeff=0.7276;MQ=69.24;MQ0=19;MQRankSum=-6.777;QD=14.56;ReadPosRankSum=1.980;VQSLOD=3.4450;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:31:50.29:0,50,748	1/1:3,1:5:13.56:104,14,0	0/1:35,0:11:2.90:3,0,302	0/0:17,0:11:14.61:0,15,279	1/1:21,1:21:30.80:253,31,0	1/1:9,1:9:19.58:160,20,0	1/1:1,3:4:0.89:2,1,0	0/0:20,0:16:31.62:0,32,455	1/1:5,0:5:12.97:75,13,0	1/1:13,1:11:14.84:150,15,0	1/1:6,1:7:12.04:152,12,0	1/1:7,1:6:14.84:167,15,0	1/1:4,0:4:8.38:63,8,0	1/1:6,1:8:16.56:120,17,0	0/0:11,0:11:30.02:0,30,405	1/1:11,2:13:35.27:308,35,0	0/0:18,0:19:50.94:0,51,692	0/1:2,6:8:8.05:66,0,8	1/1:15,3:16:13.61:327,14,0	1/1:12,3:15:31.74:255,32,0	1/1:3,0:3:9.03:113,9,0	1/1:4,1:4:8.80:74,9,0	1/1:5,2:7:16.67:141,17,0	1/1:4,2:6:11.29:94,11,0	1/1:18,4:20:43.40:419,43,0	1/1:17,1:19:35.05:350,35,0	1/1:15,2:17:43.39:424,43,0	1/1:5,0:2:5.34:23,5,0
chr10	25812429	.	C	CTTCCAAATGAGCTCGCAA	3180.14	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-0.920;DP=715;FS=2.001;HRun=0;HaplotypeScore=320.3232;InbreedingCoeff=0.9020;MQ=88.07;MQ0=0;MQRankSum=-5.317;QD=70.67;ReadPosRankSum=-0.021;VQSLOD=2.4526;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:7,8:45:45.15:3275,45,0	0/0:7,0:7:21.07:0,21,1104	0/0:23,0:23:55.53:0,56,2036	0/0:27,0:28:68.05:0,68,1935	0/0:22,0:22:66.19:0,66,2768	0/0:16,0:16:45.12:0,45,1981	0/0:28,0:28:78.17:0,78,3047	0/0:19,0:19:45.12:0,45,1657	0/0:36,0:36:99:0,99,4078	0/0:27,0:27:78.22:0,78,3211	0/0:19,0:19:57.14:0,57,2137	0/0:32,0:32:96.28:0,96,4265	0/0:21,0:21:60.19:0,60,2666	0/0:24,0:24:72.15:0,72,2772	0/0:26,0:26:78.25:0,78,3653	0/0:17,0:17:51.14:0,51,2161	0/0:33,0:33:99:0,99,3869	0/0:25,0:25:69.14:0,69,2915	0/0:17,0:17:51.17:0,51,2159	0/0:31,0:31:93.29:0,93,4213	0/0:32,0:32:93.28:0,93,3992	0/0:27,0:27:78.20:0,78,3026	0/0:34,0:34:99:0,99,4350	0/0:35,0:35:99:0,105,4711	0/0:20,0:20:60.15:0,60,2390	0/0:39,0:39:99:0,105,3954	0/0:30,0:30:87.26:0,87,3835	0/0:2,0:2:6.02:0,6,198
chr10	25812674	.	T	TGCACTTATG	2387.94	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-1.864;DP=612;FS=34.891;HRun=0;HaplotypeScore=168.8584;InbreedingCoeff=0.9983;MQ=87.24;MQ0=0;MQRankSum=-7.593;QD=79.60;ReadPosRankSum=-0.204;VQSLOD=2.0124;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:13,16:30:60.21:2483,60,0	0/0:9,0:9:27.09:0,27,827	0/0:29,0:29:81.28:0,81,2258	0/0:15,0:15:39.13:0,39,1087	0/0:19,0:19:54.19:0,54,1595	0/0:16,0:16:48.16:0,48,1471	0/0:27,0:27:81.25:0,81,2179	0/0:24,0:24:69.19:0,69,1698	0/0:25,0:25:72.25:0,72,2157	0/0:24,0:24:66.23:0,66,1872	0/0:13,0:13:39.11:0,39,1004	0/0:16,0:16:45.15:0,45,1311	0/0:19,0:19:57.20:0,57,1595	0/0:21,0:21:63.22:0,63,1896	0/0:19,0:19:54.17:0,54,1553	0/0:15,0:15:45.15:0,45,1353	0/0:39,0:39:99:0,108,3137	0/0:17,0:17:51.18:0,51,1528	0/0:14,0:14:42.14:0,42,1274	0/0:21,0:21:60.21:0,60,1786	0/0:28,0:28:78.22:0,78,2233	0/0:16,0:16:48.15:0,48,1404	0/0:30,0:30:69.20:0,69,1935	0/0:27,0:27:78.27:0,78,2357	0/0:27,0:26:78.27:0,78,2272	0/0:23,0:23:63.22:0,63,1794	0/0:39,0:39:99:0,114,3244	0/0:10,0:10:30.10:0,30,894
chr10	25812759	.	CTGAG	C	520.80	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.563;DP=702;FS=11.966;HRun=0;HaplotypeScore=130.8733;InbreedingCoeff=0.9034;MQ=90.68;MQ0=0;MQRankSum=-5.118;QD=20.03;ReadPosRankSum=-0.357;VQSLOD=2.4494;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,25:26:33.11:615,33,0	0/0:9,0:9:27.09:0,27,715	0/0:32,0:32:87.24:0,87,2085	0/0:25,0:25:72.21:0,72,1738	0/0:24,0:24:66.23:0,66,1749	0/0:23,0:23:60.21:0,60,1599	0/0:23,0:23:63.19:0,63,1591	0/0:31,0:31:81.28:0,81,2122	0/0:21,0:21:60.17:0,60,1480	0/0:33,0:33:96.33:0,96,2556	0/0:30,0:30:78.27:0,78,2062	0/0:26,0:26:78.25:0,78,2024	0/0:29,0:29:78.25:0,78,2014	0/0:27,0:27:81.28:0,81,2076	0/0:22,0:22:63.22:0,63,1679	0/0:16,0:16:48.16:0,48,1280	0/0:43,0:42:99:0,123,3167	0/0:17,0:17:48.16:0,48,1240	0/0:10,0:10:27.09:0,27,721	0/0:32,0:32:90.31:0,90,2351	0/0:49,0:49:99:0,129,3337	0/0:18,0:18:51.18:0,51,1360	0/0:28,0:28:78.27:0,78,2063	0/0:20,0:20:48.16:0,48,1264	0/0:23,0:23:66.23:0,66,1698	0/0:27,0:27:81.27:0,81,2107	0/0:36,0:36:99:0,105,2709	0/0:2,0:2:6.02:0,6,160
chr10	25813216	.	TAAAG	T	2605.41	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.993;DP=622;FS=1.768;HRun=0;HaplotypeScore=104.7999;InbreedingCoeff=0.9992;MQ=74.20;MQ0=0;MQRankSum=-5.942;QD=40.08;ReadPosRankSum=-2.099;VQSLOD=3.2123;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:78.27:0,78,2049	0/0:18,0:18:51.18:0,51,1347	0/0:15,0:14:39.10:0,39,859	0/0:10,0:10:27.09:0,27,649	0/0:33,0:33:90.22:0,90,2304	0/0:26,0:26:66.23:0,66,1743	0/0:13,0:13:36.12:0,36,950	1/1:6,31:37:93.26:1569,93,0	0/0:28,0:28:81.26:0,81,2075	0/0:26,0:26:78.27:0,78,2020	0/0:21,0:21:60.21:0,60,1583	0/0:14,0:14:39.13:0,39,1026	0/0:21,0:21:51.17:0,51,1317	0/0:17,0:17:48.16:0,48,1228	0/0:19,0:19:57.20:0,57,1506	0/0:22,0:22:57.18:0,57,1376	1/1:3,25:28:63.22:1158,63,0	0/0:20,0:20:57.20:0,57,1494	0/0:34,0:34:90.29:0,90,2276	0/0:24,0:24:69.22:0,69,1762	0/0:18,0:18:51.16:0,51,1287	0/0:23,0:23:69.23:0,69,1763	0/0:25,0:25:63.22:0,63,1663	0/0:14,0:14:42.14:0,42,1109	0/0:24,0:24:69.23:0,69,1768	0/0:29,0:29:69.23:0,69,1769	0/0:25,0:24:66.23:0,66,1742	0/0:11,0:11:33.11:0,33,871
chr10	25813536	.	TTC	T	19905.82	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=2.180;DP=707;FS=1.955;HRun=0;HaplotypeScore=102.1532;InbreedingCoeff=0.9985;MQ=88.69;MQ0=3;MQRankSum=-7.496;QD=32.79;ReadPosRankSum=5.089;VQSLOD=6.7314;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,115,2038	1/1:1,14:15:36.07:472,36,0	0/0:37,0:37:90.12:0,90,1418	0/0:20,0:20:41.74:0,42,605	1/1:0,25:25:72.17:948,72,0	1/1:0,25:25:48.12:638,48,0	1/1:1,31:32:72.24:989,72,0	1/1:5,33:38:99:1260,99,0	1/1:0,20:20:48.16:659,48,0	1/1:0,32:32:93.27:1227,93,0	1/1:1,15:16:45.15:618,45,0	1/1:5,26:31:63.21:865,63,0	1/1:1,24:25:62.99:822,63,0	1/1:2,18:20:27.27:482,27,0	1/1:0,24:24:57.19:779,57,0	1/1:1,24:25:57.19:782,57,0	1/1:3,27:30:69.23:947,69,0	1/1:1,11:11:27.09:371,27,0	1/1:1,14:15:42.10:528,42,0	1/1:1,15:16:41.99:494,42,0	1/1:2,32:34:81.27:1112,81,0	1/1:3,24:27:63.17:844,63,0	1/1:0,25:25:66.15:906,66,0	1/1:0,25:25:63.21:865,63,0	1/1:2,32:32:84.28:1154,84,0	1/1:1,29:30:87.28:1177,87,0	1/1:1,22:23:48.12:638,48,0	1/1:0,8:8:24.08:330,24,0
chr10	25813637	.	GCTCTCTCTCTCTCTCT	G	7990.50	PASS	AB=0.810;AC=43;AF=0.768;AN=56;BaseQRankSum=5.434;DP=573;FS=4.406;HRun=0;HaplotypeScore=222.0608;InbreedingCoeff=0.5479;MQ=63.47;MQ0=23;MQRankSum=-4.240;QD=20.92;ReadPosRankSum=1.303;VQSLOD=3.3707;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:15.05:0,15,907	1/1:5,1:6:9.01:191,9,0	0/0:37,0:18:3.01:0,3,106	0/0:58,0:18:3.01:0,3,46	1/1:12,1:15:0.47:1,0,0	1/1:12,1:13:3.01:102,3,0	1/1:12,2:13:6.02:149,6,0	0/0:33,0:33:24.05:0,24,834	1/1:24,0:25:15.05:579,15,0	1/1:16,3:20:21.06:705,21,0	1/1:10,0:12:9.03:344,9,0	1/1:23,0:24:12.04:489,12,0	1/1:25,0:25:27.09:1072,27,0	1/1:18,1:18:9.03:313,9,0	0/1:13,0:17:99:201,0,123	1/1:12,0:12:6.02:243,6,0	0/0:19,0:18:33.43:0,33,1260	1/1:12,0:11:3.01:121,3,0	1/1:15,0:14:3:121,3,0	1/1:28,0:28:12.04:477,12,0	0/0:10,0:10:3.01:0,3,227	1/1:15,0:15:9.03:355,9,0	1/1:17,0:17:6.02:249,6,0	1/1:17,0:17:3.89:123,4,0	1/1:17,0:17:9.03:364,9,0	1/1:19,0:19:18.06:712,18,0	1/1:33,0:30:18.06:720,18,0	1/1:2,0:3:9.03:360,9,0
chr10	25813664	.	CTCTCTCTCTCTCTCTCTCTGTGTGTGTGTG	C	12851.27	PASS	AB=0.991;AC=34;AF=0.607;AN=56;BaseQRankSum=9.237;DP=574;FS=0.584;HRun=0;HaplotypeScore=260.0235;InbreedingCoeff=-0.0277;MQ=38.83;MQ0=27;MQRankSum=-3.216;QD=27.64;ReadPosRankSum=5.073;VQSLOD=3.3983;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:15.39:0,15,1097	0/1:12,0:12:3.45:429,0,3	0/0:9,0:1:3.01:0,3,126	0/0:23,0:5:6.02:0,6,112	1/1:19,0:18:2.99:25,3,0	1/1:18,0:17:2.21:161,2,0	0/1:16,0:14:89.98:90,0,137	0/0:26,0:26:64.27:0,64,2219	0/1:28,0:28:22.91:740,0,23	0/1:22,0:21:60.98:1240,0,61	1/1:17,0:17:9.03:391,9,0	1/1:20,0:20:11.94:667,12,0	1/1:30,2:31:29.16:1809,29,0	1/1:20,1:20:8.76:464,9,0	0/1:29,0:28:52.19:52,0,191	1/1:16,0:16:6.02:361,6,0	0/1:23,0:22:99:231,0,1767	0/1:10,0:8:13.10:174,0,13	0/1:18,0:15:35.70:719,0,36	0/1:32,1:33:10.46:766,0,10	0/0:18,0:15:6.02:0,6,590	1/1:20,1:20:9.03:602,9,0	1/1:15,0:15:6.02:281,6,0	0/1:18,0:16:17.07:175,0,17	1/1:19,0:19:9.03:541,9,0	0/1:17,1:18:66.60:1271,0,67	0/1:34,1:31:2.30:1123,0,2	1/1:4,0:4:5.09:537,5,0
chr10	25813666	.	CTCTCTCTCTCTCTCTCTGTGTGTGTGTG	C	15208.04	PASS	AB=1.000;AC=41;AF=0.759;AN=54;BaseQRankSum=6.552;DP=554;FS=1.398;HRun=0;HaplotypeScore=227.9074;InbreedingCoeff=0.4165;MQ=38.44;MQ0=27;MQRankSum=-2.666;QD=35.12;ReadPosRankSum=3.654;VQSLOD=3.8648;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:15.52:0,16,967	1/1:11,0:11:18.04:499,18,0	0/0:7,0:1:3.01:0,3,106	0/0:18,0:1:3.01:0,3,46	./.	1/1:19,0:18:2.14:207,2,0	0/1:13,0:11:99:140,0,127	0/0:27,0:26:60.71:0,61,1713	1/1:3,24:27:14.90:983,15,0	1/1:22,0:21:37.82:1521,38,0	1/1:7,9:16:9.03:529,9,0	1/1:4,16:20:11.80:805,12,0	1/1:9,23:31:28.93:1991,29,0	1/1:20,0:20:8.50:483,8,0	0/1:29,0:28:99:166,0,123	1/1:5,10:15:6.02:453,6,0	0/1:22,0:21:99:231,0,1462	1/1:5,5:8:2.94:227,3,0	1/1:8,9:15:27:842,27,0	1/1:8,24:32:11.24:885,11,0	0/0:19,0:16:6.02:0,6,537	1/1:6,14:19:9.03:659,9,0	1/1:4,11:15:6.02:373,6,0	1/1:7,11:16:3.89:228,4,0	1/1:1,17:18:9.03:680,9,0	1/1:5,12:17:33:1424,33,0	1/1:5,29:31:18.66:1340,19,0	1/1:4,1:4:6.06:543,6,0
chr10	25813668	.	CTCTCTCTCTCTCTCTGTGTGTGTGTGTG	C	13858.21	PASS	AB=1.000;AC=40;AF=0.741;AN=54;BaseQRankSum=7.956;DP=532;FS=2.201;HRun=0;HaplotypeScore=219.9806;InbreedingCoeff=0.3340;MQ=38.29;MQ0=27;MQRankSum=-1.461;QD=33.23;ReadPosRankSum=4.044;VQSLOD=3.7957;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:15.52:0,16,847	1/1:10,0:10:15.03:388,15,0	0/0:7,0:1:3.01:0,3,86	0/0:15,0:1:2.99:0,3,23	./.	1/1:6,13:18:2.14:226,2,0	0/1:14,0:12:90.94:91,0,135	0/0:26,0:24:48.21:0,48,1322	1/1:26,0:26:3.84:916,4,0	1/1:21,0:20:5.77:1386,6,0	1/1:15,0:15:9.03:477,9,0	1/1:18,0:18:11.80:735,12,0	1/1:31,0:30:28.93:1821,29,0	1/1:8,0:20:8.50:476,8,0	0/1:29,0:28:60.64:158,0,61	1/1:14,0:14:5.77:418,6,0	0/1:22,0:21:99:284,0,1204	1/1:10,0:8:3.01:205,3,0	0/1:15,0:13:5.08:677,0,5	1/1:31,0:31:11.24:818,11,0	0/0:19,0:16:6.02:0,6,528	1/1:18,0:17:9.03:608,9,0	1/1:14,0:14:6.02:339,6,0	1/1:16,0:14:3.90:211,4,0	1/1:19,0:19:9.03:628,9,0	1/1:16,0:16:20.96:1243,21,0	1/1:33,0:29:18.66:1238,19,0	1/1:5,0:4:6.77:517,7,0
chr10	25813674	.	CTCTCTCTCTGTGTGTGTGTG	C	11302.06	PASS	AB=1.000;AC=41;AF=0.820;AN=50;BaseQRankSum=6.733;DP=515;FS=0.852;HRun=0;HaplotypeScore=198.1053;InbreedingCoeff=0.5480;MQ=38.19;MQ0=25;MQRankSum=-3.904;QD=27.98;ReadPosRankSum=3.948;VQSLOD=3.5984;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:15.05:0,15,415	1/1:9,0:9:12.04:364,12,0	./.	./.	./.	1/1:19,0:18:2.95:139,3,0	0/0:12,0:10:3.01:0,3,99	0/0:20,0:18:27.14:0,27,515	1/1:26,0:26:14.98:664,15,0	1/1:22,0:21:40.32:1261,40,0	1/1:15,0:15:9.03:301,9,0	1/1:18,0:18:11.77:509,12,0	1/1:31,0:30:29.38:1362,29,0	1/1:22,0:21:8.78:394,9,0	1/1:10,20:29:11.70:576,12,0	1/1:14,0:14:6.02:301,6,0	0/1:20,0:19:99:382,0,487	1/1:10,0:8:3.01:151,3,0	1/1:16,0:14:26.94:766,27,0	1/1:32,0:32:10.76:600,11,0	0/0:20,0:16:6.49:0,6,381	1/1:17,0:17:9.03:452,9,0	1/1:14,0:14:6.02:221,6,0	1/1:17,0:15:3.90:153,4,0	1/1:19,0:19:9.03:452,9,0	1/1:16,0:16:33.04:1005,33,0	1/1:33,0:29:18.25:904,18,0	1/1:4,0:4:8.16:345,8,0
chr10	25813682	.	CTGTGTGTGTGTG	C	7825.61	PASS	AB=0.857;AC=44;AF=0.815;AN=54;BaseQRankSum=3.426;DP=514;FS=3.520;HRun=0;HaplotypeScore=170.0277;InbreedingCoeff=0.5406;MQ=39.18;MQ0=19;MQRankSum=-1.685;QD=17.01;ReadPosRankSum=3.140;VQSLOD=3.7860;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:31:0:0,0,0	1/1:1,8:10:9.03:308,9,0	0/0:2,0:2:6.02:0,6,251	0/0:3,0:2:6.02:0,6,329	./.	1/1:18,0:18:3.01:85,3,0	0/0:8,5:11:3.01:0,3,99	0/1:19,0:22:0:1,0,0	1/1:26,0:26:11.97:379,12,0	1/1:13,9:21:29.58:1034,30,0	1/1:16,0:16:9.03:173,9,0	1/1:18,0:18:7.44:282,7,0	1/1:31,0:30:27:858,27,0	1/1:22,0:21:9.03:228,9,0	1/1:28,0:27:8.69:289,9,0	1/1:13,0:14:6.02:190,6,0	1/1:11,1:18:20.30:592,20,0	1/1:10,0:8:3.01:95,3,0	1/1:16,0:14:26.94:710,27,0	1/1:33,0:32:12.04:379,12,0	0/0:15,4:16:6.02:0,6,245	1/1:17,0:17:9.03:284,9,0	1/1:14,0:14:5.89:109,6,0	1/1:17,0:15:3.90:97,4,0	1/1:19,0:19:9.03:285,9,0	1/1:15,0:16:21.02:702,21,0	1/1:33,0:29:18.33:569,18,0	1/1:4,0:4:6.01:179,6,0
chr10	25814696	.	ATTTATTGCTCT	A	33654.24	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=14.784;DP=557;FS=2.238;HRun=0;HaplotypeScore=211.2979;InbreedingCoeff=0.9887;MQ=67.04;MQ0=0;MQRankSum=-15.273;QD=80.51;ReadPosRankSum=4.914;VQSLOD=4.6591;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,105,5373	1/1:0,12:12:33.11:1164,33,0	0/0:17,0:17:41.20:0,41,1747	0/0:9,0:9:27.09:0,27,1401	1/1:4,26:30:66.23:2327,66,0	1/1:4,19:23:48.16:1691,48,0	1/1:3,13:16:36.12:1217,36,0	0/0:26,0:26:72.25:0,72,3852	1/1:2,24:26:66.23:2328,66,0	1/1:3,19:22:60.16:1919,60,0	1/1:4,12:16:36.12:1229,36,0	1/1:1,19:20:48.16:1693,48,0	1/1:4,15:19:42.14:1481,42,0	1/1:2,26:28:69.24:2308,69,0	0/0:25,0:25:72.25:0,72,3922	1/1:3,20:23:54.19:1853,54,0	0/0:24,0:24:72.25:0,72,4035	1/1:1,8:9:21.07:689,21,0	1/1:2,14:16:42.12:1204,42,0	1/1:1,17:18:45.15:1494,45,0	1/1:4,9:13:14.74:438,15,0	1/1:3,13:16:36.12:1179,36,0	1/1:2,15:17:36.12:1268,36,0	1/1:2,11:13:24.08:846,24,0	1/1:1,17:18:39.13:1375,39,0	1/1:1,24:25:72.23:2459,72,0	1/1:5,29:34:87.30:3068,87,0	1/1:0,4:4:12.04:423,12,0
chr10	25815182	.	CCTGCTCAATGTTCTTTTTTTTTTTTTTTTTTCGGT	C	13752.51	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=4.792;DP=401;FS=38.988;HRun=0;HaplotypeScore=332.1722;InbreedingCoeff=0.5198;MQ=80.45;MQ0=0;MQRankSum=-6.273;QD=44.22;ReadPosRankSum=5.697;VQSLOD=2.5574;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:8,11:19:14.99:1078,15,0	1/1:7,2:9:5.99:519,6,0	0/0:23,0:21:41.15:0,41,1277	0/0:23,0:21:32.60:0,33,1665	1/1:16,9:25:20.94:1577,21,0	1/1:7,5:12:8.98:779,9,0	0/0:10,0:10:0:0,0,0	1/1:17,0:17:2.86:27,3,0	1/1:6,5:11:9.02:779,9,0	1/1:16,2:17:5.90:519,6,0	1/1:15,5:20:11.87:576,12,0	1/1:12,7:19:5.95:519,6,0	1/1:6,1:7:2.99:260,3,0	1/1:7,3:10:2.98:260,3,0	0/0:8,0:8:12.04:0,12,371	1/1:1,7:8:12.03:1038,12,0	1/1:8,5:13:3.44:261,3,0	1/1:1,1:2:2.99:260,3,0	1/1:19,6:25:17.94:521,18,0	1/1:10,3:13:5.94:519,6,0	0/0:19,0:19:1.25:0,1,3	1/1:11,2:13:5.95:519,6,0	1/1:12,6:18:9.38:780,9,0	0/0:7,0:7:0:0,0,0	1/1:6,6:12:14.99:1298,15,0	1/1:14,4:18:11.91:804,12,0	1/1:13,6:19:9.42:779,9,0	1/1:3,0:3:2.99:82,3,0
chr10	25815214	.	CG	C	306.19	PASS	AB=0.500;AC=45;AF=0.865;AN=52;BaseQRankSum=5.985;DP=138;FS=6.234;HRun=2;HaplotypeScore=99.1999;InbreedingCoeff=0.4497;MQ=81.00;MQ0=1;MQRankSum=-4.141;QD=3.06;ReadPosRankSum=5.287;VQSLOD=0.1330;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:11:9.31:31,9,0	1/1:2,0:2:4.44:14,4,0	0/0:11,0:6:14.17:0,14,176	0/0:11,1:11:9.88:0,10,120	1/1:9,0:9:13.78:46,14,0	1/1:5,0:5:6.66:21,7,0	1/1:0,1:1:2.92:17,3,0	./.	1/1:5,0:5:6.66:21,7,0	1/1:2,0:2:4.44:14,4,0	1/1:5,0:5:4.82:17,5,0	1/1:7,0:7:4.44:14,4,0	1/1:1,0:1:2.22:7,2,0	1/1:3,0:3:2.22:7,2,0	0/0:13,0:13:20.43:0,20,126	1/1:7,0:7:8.88:28,9,0	1/1:5,0:5:2.22:7,2,0	1/1:1,0:1:2.22:7,2,0	1/1:6,0:6:6.44:31,6,0	1/1:3,0:3:4.82:17,5,0	1/1:1,0:1:2.94:18,3,0	1/1:2,0:2:4.96:19,5,0	1/1:6,0:6:7.12:25,7,0	0/1:0,2:2:0:0,0,0	1/1:6,0:6:11.10:35,11,0	1/1:4,0:4:6.66:21,7,0	1/1:6,0:6:6.51:21,7,0	./.
chr10	25815364	.	GAGAGAGAGAGAGAGAGAGAGAGAGAT	G	1565.69	PASS	AB=0.960;AC=15;AF=0.300;AN=50;BaseQRankSum=3.271;DP=353;FS=79.682;HRun=0;HaplotypeScore=190.7028;InbreedingCoeff=0.2340;MQ=40.78;MQ0=31;MQRankSum=-0.212;QD=11.18;ReadPosRankSum=1.277;VQSLOD=-0.3146;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:26:9.48:0,9,140	0/0:5,0:5:0:0,0,0	./.	./.	0/0:20,0:20:2.94:0,3,18	0/0:20,0:19:5.70:0,6,29	1/1:8,0:5:3:29,3,0	0/0:18,0:16:36.09:0,36,1009	0/1:19,0:19:12.73:89,0,13	1/1:1,12:13:29.89:711,30,0	./.	0/0:16,0:16:11.21:0,11,58	0/1:8,5:12:8.12:8,0,26	0/0:9,0:8:3.01:0,3,41	0/0:5,0:4:9.02:0,9,172	0/0:9,0:8:8.86:0,9,59	0/0:7,0:6:3.01:0,3,168	0/1:6,0:6:34.37:62,0,34	1/1:21,0:18:30.93:357,31,0	0/0:14,0:13:5.96:0,6,45	0/1:11,0:9:0:0,0,0	0/0:13,0:9:0:0,0,0	0/0:18,0:17:0.47:0,0,1	0/1:6,0:6:12.37:22,0,12	0/0:6,0:6:2.70:0,3,16	0/1:14,0:12:36.56:88,0,37	0/1:20,0:20:0:0,0,0	1/1:8,1:5:6.02:338,6,0
chr10	25815366	.	GAGAGAGAGAGAGAGAGAGAGAGAT	G	1474.20	PASS	AB=0.937;AC=17;AF=0.340;AN=50;BaseQRankSum=3.927;DP=354;FS=61.690;HRun=0;HaplotypeScore=169.6961;InbreedingCoeff=0.2687;MQ=42.78;MQ0=32;MQRankSum=0.686;QD=10.76;ReadPosRankSum=1.320;VQSLOD=0.9188;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:25:9.35:0,9,124	0/1:1,4:5:0:0,0,0	0/0:7,0:1:3.01:0,3,104	0/0:12,0:2:6.01:0,6,130	./.	0/0:20,0:19:2.68:0,3,11	1/1:8,0:5:2.68:11,3,0	0/0:17,0:15:36.09:0,36,944	0/1:19,0:19:8.27:96,0,8	1/1:13,0:13:29.89:674,30,0	./.	0/0:16,0:16:9.59:0,10,46	0/1:12,0:11:9.33:11,0,9	0/0:9,0:8:3:0,3,27	0/0:6,0:5:9:0,9,119	0/0:9,0:8:5.52:0,6,28	0/0:7,0:6:3.01:0,3,166	0/1:6,0:6:6.51:55,0,7	1/1:20,0:17:31.21:323,31,0	0/0:14,0:13:3.46:0,3,23	./.	0/0:13,0:9:0:0,0,0	0/0:16,0:15:0.47:0,0,1	0/1:6,0:6:7.13:7,0,8	1/1:6,0:6:2.62:21,3,0	0/1:12,0:11:32.64:85,0,33	0/1:21,0:21:0:0,0,0	1/1:6,3:5:6.02:330,6,0
chr10	25815368	.	GAGAGAGAGAGAGAGAGAGAGAT	G	1429.15	PASS	AB=0.856;AC=23;AF=0.460;AN=50;BaseQRankSum=3.704;DP=350;FS=34.724;HRun=0;HaplotypeScore=162.7062;InbreedingCoeff=0.4426;MQ=46.73;MQ0=30;MQRankSum=0.117;QD=8.26;ReadPosRankSum=2.365;VQSLOD=1.4781;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:25:9.27:0,9,98	0/0:4,1:5:0:0,0,0	0/0:9,0:3:1.66:0,2,79	0/0:15,0:2:6.01:0,6,105	./.	1/1:19,0:18:2.37:8,2,0	0/0:8,0:5:1.89:0,2,5	0/0:17,0:17:39.05:0,39,883	1/1:19,0:19:5.95:132,6,0	1/1:13,0:13:29.89:622,30,0	./.	1/1:15,0:15:1.14:14,1,0	1/1:11,0:10:2.92:17,3,0	0/0:8,0:7:2.37:0,2,8	0/0:6,0:5:8.95:0,9,68	1/1:8,0:7:5.52:26,6,0	0/0:7,0:6:3.01:0,3,154	0/1:6,0:6:4.87:41,0,5	1/1:19,0:17:31.67:298,32,0	0/0:13,0:12:2.04:0,2,6	./.	0/0:13,0:9:0:0,0,0	0/1:15,0:14:0:0,0,1	1/1:6,0:6:2.51:8,3,0	0/0:6,0:6:2.68:0,3,11	1/1:12,0:11:3.62:118,4,0	0/1:5,16:21:0:0,0,0	1/1:9,0:5:6.02:282,6,0
chr10	25815430	.	TAGAG	T	1171.69	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=3.506;DP=460;FS=8.298;HRun=0;HaplotypeScore=111.0777;InbreedingCoeff=0.7862;MQ=71.21;MQ0=6;MQRankSum=-2.361;QD=36.62;ReadPosRankSum=-2.659;VQSLOD=2.5246;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:21.07:0,21,532	0/0:6,0:6:2.90:0,3,81	0/0:39,0:24:44.42:0,44,1047	0/0:50,0:30:31.28:0,31,603	0/0:15,0:15:24.06:0,24,520	0/0:21,0:20:21.07:0,21,558	0/0:8,0:8:24.08:0,24,601	1/1:3,20:23:60.14:1009,60,0	0/0:13,0:13:18.06:0,18,485	0/0:16,0:16:33.11:0,33,854	0/0:19,0:19:27.09:0,27,719	0/0:16,0:16:42.14:0,42,1100	0/0:14,0:14:30.10:0,30,795	0/0:9,0:9:21.07:0,21,550	0/0:9,0:9:24.07:0,24,582	0/0:13,0:13:36.11:0,36,865	1/1:1,8:9:15.05:280,15,0	0/0:8,0:8:24.08:0,24,647	0/0:18,0:18:48.15:0,48,1155	0/0:11,0:11:9.03:0,9,242	0/0:6,0:6:12.04:0,12,324	0/0:13,0:13:33.11:0,33,827	0/0:14,0:14:21.07:0,21,542	0/0:6,0:6:2.74:0,3,81	0/0:19,0:19:42.14:0,42,1125	0/0:22,0:22:66.23:0,66,1725	0/0:28,0:28:30.10:0,30,715	0/0:15,0:15:32.32:0,32,771
chr10	25815720	.	C	CTTTT	2087.64	PASS	AB=1.000;AC=45;AF=0.900;AN=50;BaseQRankSum=0.763;DP=184;FS=21.061;HRun=7;HaplotypeScore=172.1863;InbreedingCoeff=0.4379;MQ=45.80;MQ0=4;MQRankSum=0.496;QD=12.43;ReadPosRankSum=1.978;VQSLOD=-0.4069;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:7,0:7:11.70:73,12,0	./.	0/0:7,0:3:5.96:0,6,62	0/0:4,0:4:6.01:0,6,94	1/1:3,0:3:2.84:14,3,0	1/1:17,0:17:20.66:132,21,0	1/1:5,0:5:7.33:38,7,0	1/1:18,0:17:37.55:215,38,0	1/1:6,0:6:8.91:61,9,0	1/1:7,0:7:11.13:69,11,0	./.	1/1:2,0:2:5.95:42,6,0	1/1:6,0:6:9.40:65,9,0	1/1:3,0:3:5.94:41,6,0	1/1:2,13:16:33.07:772,33,0	1/1:9,0:9:11.87:82,12,0	1/1:6,0:6:5.95:42,6,0	1/1:6,0:6:5.88:37,6,0	1/1:7,0:5:8.65:46,9,0	1/1:2,0:2:2.74:12,3,0	1/1:2,0:2:2.98:21,3,0	1/1:6,0:6:8.80:53,9,0	0/1:2,0:2:0:0,0,0	1/1:4,0:4:5.91:40,6,0	./.	1/1:10,0:10:16.49:89,16,0	1/1:19,0:18:25.18:173,25,0	1/1:5,0:5:13.91:78,14,0
chr10	25818031	.	G	GA	112.91	PASS	AC=4;AF=0.200;AN=20;BaseQRankSum=2.170;DP=231;DS;FS=7.259;HRun=0;HaplotypeScore=13.3207;InbreedingCoeff=0.4924;MQ=19.17;MQ0=132;MQRankSum=0.023;QD=4.34;ReadPosRankSum=-1.704;VQSLOD=1.3777;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:13,0:2:6.02:0,6,84	0/0:21,0:4:12.03:0,12,145	./.	./.	./.	0/0:35,0:1:3:0,3,29	1/1:3,3:5:13.12:154,13,0	0/0:3,0:1:3.01:0,3,30	./.	./.	./.	./.	0/0:16,0:14:39.13:0,39,543	./.	0/0:21,1:13:8.89:0,9,78	./.	./.	./.	1/1:19,1:6:3.01:48,3,0	./.	./.	0/0:15,1:4:6.02:0,6,84	./.	0/0:2,0:1:3:0,3,27	./.	./.
chr10	25819046	.	A	AGTGTGTGTGTGTGT	33606.60	PASS	AC=46;AF=0.885;AN=52;BaseQRankSum=3.775;DP=649;FS=2.532;HRun=0;HaplotypeScore=279.7863;InbreedingCoeff=0.8472;MQ=58.35;MQ0=19;MQRankSum=-10.403;QD=66.95;ReadPosRankSum=3.357;VQSLOD=4.3084;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:31:50.93:1291,51,0	1/1:2,1:3:6.02:292,6,0	0/0:59,0:41:63.37:0,63,1830	0/0:52,0:29:40.85:0,41,1266	1/1:13,2:13:12.04:398,12,0	1/1:17,3:20:33.11:1186,33,0	1/1:21,3:26:48.15:1668,48,0	1/1:37,0:37:78.21:2206,78,0	1/1:27,14:41:78.71:3357,79,0	1/1:21,1:21:30.06:932,30,0	1/1:12,1:11:12.04:498,12,0	1/1:18,10:26:54.17:2529,54,0	1/1:22,4:24:54.17:2066,54,0	1/1:15,7:22:45.14:2103,45,0	0/0:19,0:19:51.13:0,51,1922	1/1:16,4:18:36.12:1739,36,0	1/1:22,0:27:54.13:1727,54,0	1/1:9,2:12:18.46:1032,18,0	1/1:24,1:27:47.63:2216,48,0	1/1:12,2:12:12:438,12,0	1/1:29,2:30:35.90:806,36,0	./.	./.	1/1:14,3:16:6.49:283,6,0	1/1:9,4:11:15.05:849,15,0	1/1:11,6:19:45.15:2262,45,0	1/1:20,12:32:75.26:3647,75,0	1/1:3,0:3:3.48:80,3,0
chr10	25819059	.	GTTCAAGT	G	7016.64	PASS	AB=0.850;AC=23;AF=0.411;AN=56;BaseQRankSum=-4.199;DP=700;FS=16.317;HRun=0;HaplotypeScore=264.8397;InbreedingCoeff=-0.5822;MQ=54.91;MQ0=22;MQRankSum=-7.891;QD=13.73;ReadPosRankSum=1.868;VQSLOD=2.5609;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:34,1:35:99:313,0,1243	0/0:5,0:5:9.92:0,10,194	0/0:75,0:45:93.17:0,93,3739	0/0:73,0:40:97.39:0,97,2810	0/1:12,4:14:99:274,0,164	0/1:14,5:19:99:251,0,343	0/1:22,7:29:99:414,0,963	0/1:30,4:34:99:659,0,1642	0/1:36,4:39:99:391,0,1049	0/1:13,5:17:99:418,0,605	0/1:13,3:14:93.56:94,0,443	0/1:24,5:26:99:289,0,642	0/1:15,11:24:99:779,0,519	0/1:16,4:21:99:387,0,339	0/0:19,0:19:54.14:0,54,2076	0/1:19,3:20:99:333,0,706	0/1:32,0:32:99:447,0,1271	0/1:12,1:13:50.73:51,0,385	0/1:20,5:25:99:377,0,1162	0/1:12,2:13:99:108,0,378	0/1:28,4:32:99:175,0,791	0/0:6,0:5:9.03:0,9,186	0/0:8,2:8:12.02:0,12,237	0/1:17,3:19:51.62:52,0,395	0/1:10,3:11:99:120,0,225	0/1:14,5:18:99:361,0,435	0/1:28,6:34:99:606,0,1081	1/1:1,2:3:6.02:119,6,0
chr10	25819060	.	TTCAA	T	3394.43	PASS	AB=0.968;AC=23;AF=0.411;AN=56;BaseQRankSum=3.117;DP=679;FS=13.023;HRun=0;HaplotypeScore=250.4064;InbreedingCoeff=-0.5843;MQ=55.60;MQ0=21;MQRankSum=-6.468;QD=6.89;ReadPosRankSum=1.119;VQSLOD=0.6483;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:34,0:34:99:103,0,1106	0/0:4,0:4:12:0,12,206	0/0:74,1:46:66.50:0,66,2955	0/0:75,0:41:99:0,107,2174	0/1:13,0:14:99:150,0,157	0/1:16,2:18:99:124,0,316	0/1:29,0:29:99:174,0,860	0/1:27,4:31:99:378,0,1429	0/1:35,3:37:99:221,0,1004	0/1:16,1:17:99:199,0,636	0/1:16,0:14:52.06:52,0,497	0/1:26,1:26:99:119,0,528	0/1:25,0:24:99:366,0,456	0/1:20,0:20:99:199,0,329	0/0:18,0:18:54.14:0,54,1491	0/1:22,0:21:99:163,0,686	0/1:24,5:30:99:234,0,1072	0/1:12,0:12:8.34:8,0,377	0/1:23,0:23:99:180,0,947	0/1:12,0:12:63.52:64,0,310	0/1:29,0:29:85.87:86,0,694	0/0:4,0:4:9.03:0,9,185	0/0:7,0:6:12.02:0,12,212	0/1:18,2:19:13.64:14,0,343	0/1:11,1:11:65.76:66,0,182	0/1:19,0:18:99:176,0,370	0/1:34,0:34:99:277,0,992	1/1:2,0:2:3.01:42,3,0
chr10	25819061	.	TCAA	T	1312.73	PASS	AB=0.975;AC=22;AF=0.393;AN=56;BaseQRankSum=6.115;DP=686;FS=8.889;HRun=0;HaplotypeScore=252.7989;InbreedingCoeff=-0.4980;MQ=55.50;MQ0=21;MQRankSum=-6.706;QD=2.71;ReadPosRankSum=1.197;VQSLOD=0.9777;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:35,0:35:26.82:27,0,1191	0/0:5,0:5:15.05:0,15,269	0/0:76,0:47:99:0,107,2625	0/0:75,0:42:99:0,109,1984	0/1:13,2:14:80.09:80,0,147	0/1:18,0:18:62.91:63,0,377	0/1:29,0:29:84.49:84,0,924	0/1:31,0:31:99:158,0,1421	0/1:38,0:37:59:59,0,1059	0/1:18,1:18:69.53:70,0,728	0/1:16,0:14:5.77:6,0,470	0/1:28,1:26:53.39:53,0,687	0/1:25,1:24:99:214,0,468	0/1:21,0:21:99:102,0,333	0/0:18,0:18:51.17:0,51,1250	0/1:23,1:22:72.90:73,0,783	0/1:29,1:30:99:146,0,1084	0/0:13,0:13:10.06:0,10,523	0/1:22,0:22:57.20:57,0,926	0/1:12,2:12:24.65:25,0,299	0/1:29,0:29:2.04:2,0,808	0/0:4,1:4:9.03:0,9,169	0/0:8,1:7:12.02:0,12,208	0/1:20,0:19:2.35:2,0,353	0/1:12,1:11:28.34:28,0,208	0/1:19,0:18:72.26:72,0,478	0/1:34,0:34:99:122,0,1056	1/1:2,0:2:3:25,3,0
chr10	25819066	.	TTG	T	9806.59	PASS	AB=0.673;AC=47;AF=0.839;AN=56;BaseQRankSum=0.368;DP=700;FS=7.989;HRun=0;HaplotypeScore=214.3438;InbreedingCoeff=0.6805;MQ=53.89;MQ0=23;MQRankSum=-3.031;QD=18.64;ReadPosRankSum=1.329;VQSLOD=4.0482;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,24:34:55.64:621,56,0	1/1:0,5:5:15.05:187,15,0	0/0:77,1:49:39.72:0,40,1076	0/0:75,0:42:51.10:0,51,1017	1/1:5,8:14:2.84:120,3,0	1/1:7,11:19:6.85:244,7,0	1/1:8,23:31:38.51:555,39,0	0/1:17,16:33:0.03:552,0,0	1/1:8,25:36:26.97:796,27,0	1/1:8,11:19:18.95:410,19,0	1/1:3,12:14:15.45:289,15,0	1/1:7,20:26:38.06:613,38,0	1/1:14,13:27:13.08:395,13,0	1/1:6,14:20:8.59:331,9,0	0/0:18,0:18:42.14:0,42,690	1/1:4,17:22:45.31:596,45,0	1/1:8,21:31:26.44:636,26,0	1/1:3,10:13:26.76:352,27,0	1/1:12,10:22:23.32:399,23,0	1/1:3,10:14:7.02:246,7,0	1/1:9,22:30:40.42:488,40,0	1/1:1,3:3:9.03:112,9,0	1/1:2,5:7:9.03:112,9,0	1/1:5,15:22:9.72:247,10,0	1/1:4,6:10:0.71:169,1,0	1/1:6,12:19:34.04:485,34,0	1/1:8,25:33:50.54:850,51,0	0/0:2,0:2:2.04:0,2,6
chr10	25819080	.	GTA	G	4211.05	PASS	AB=0.996;AC=32;AF=0.571;AN=56;BaseQRankSum=13.629;DP=707;FS=8.301;HRun=0;HaplotypeScore=221.3500;InbreedingCoeff=-0.2985;MQ=55.47;MQ0=11;MQRankSum=-10.961;QD=7.71;ReadPosRankSum=10.690;VQSLOD=1.9977;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:32,0:32:38.48:208,0,38	0/1:6,0:6:7.14:85,0,7	0/0:69,0:47:99:0,102,1714	0/0:71,1:46:64.04:0,64,1482	0/1:15,0:14:10.54:52,0,11	0/1:22,0:22:84.16:99,0,84	0/1:37,0:37:57.08:190,0,57	1/1:24,1:25:6:194,6,0	1/1:35,2:37:45.73:483,46,0	0/1:18,0:18:34.63:110,0,35	1/1:18,0:17:3.35:125,3,0	1/1:24,0:23:0.88:280,1,0	0/1:24,2:26:6.82:259,0,7	0/1:23,0:23:53.70:216,0,54	0/0:17,0:17:51.13:0,51,873	1/1:23,0:23:10.43:230,10,0	1/1:29,0:29:24.35:320,24,0	1/1:13,0:13:8.33:137,8,0	0/1:21,0:21:99:137,0,111	0/1:20,0:20:74.41:74,0,127	0/1:39,0:38:99:179,0,107	0/1:9,0:8:36.78:37,0,79	0/1:10,0:10:12.08:48,0,12	0/1:25,0:25:67:86,0,67	0/1:14,0:13:7.75:66,0,8	0/1:21,0:21:34.38:216,0,34	0/1:38,0:38:49.74:379,0,50	0/1:1,0:1:0:0,0,0
chr10	25820167	.	G	GA	1696.86	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=-4.058;DP=548;FS=2.336;HRun=8;HaplotypeScore=135.9288;InbreedingCoeff=0.8997;MQ=75.67;MQ0=0;MQRankSum=-2.362;QD=17.86;ReadPosRankSum=-2.947;VQSLOD=1.7638;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:7,0:16:22.85:121,23,0	0/0:10,0:10:30.02:0,30,274	0/0:17,0:16:35.08:0,35,312	0/1:15,0:16:3.65:4,0,221	0/0:29,0:29:84.04:0,84,768	0/0:21,0:21:60.03:0,60,549	0/0:12,0:12:30.01:0,30,275	1/1:8,26:34:75.19:844,75,0	0/0:17,0:17:48.03:0,48,439	0/0:34,0:34:90.03:0,90,819	0/0:21,0:21:53.99:0,54,480	0/0:14,0:14:33.01:0,33,302	0/0:17,0:17:48.03:0,48,439	0/0:11,0:11:33:0,33,296	1/1:0,11:11:30.09:346,30,0	0/0:16,0:16:48.01:0,48,435	1/1:3,15:18:48.13:544,48,0	0/0:15,0:15:45.02:0,45,412	0/0:25,0:25:66.02:0,66,600	0/0:30,0:30:78.02:0,78,708	0/0:23,0:23:66.02:0,66,598	0/0:23,0:23:63.01:0,63,571	0/0:30,0:30:84.03:0,84,764	0/0:16,0:16:41.99:0,42,375	0/0:14,0:14:42.02:0,42,384	0/0:23,0:23:54.02:0,54,494	0/0:30,0:30:70.85:0,71,636	0/0:5,0:5:15.01:0,15,137
chr10	25820271	.	CT	C	11543.18	PASS	AB=0.667;AC=51;AF=0.911;AN=56;BaseQRankSum=-1.038;DP=532;FS=2.304;HRun=9;HaplotypeScore=84.2123;InbreedingCoeff=0.7700;MQ=67.67;MQ0=0;MQRankSum=-5.739;QD=22.50;ReadPosRankSum=4.430;VQSLOD=5.4769;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,17:23:54.03:494,54,0	1/1:2,5:7:14.96:129,15,0	0/0:10,0:10:21.06:0,21,235	0/0:9,0:9:8.09:0,8,138	1/1:4,17:21:38.98:357,39,0	1/1:1,18:19:48.01:439,48,0	1/1:2,12:14:33.01:302,33,0	1/1:7,39:46:99:1057,117,0	1/1:2,12:14:33:302,33,0	1/1:7,22:29:72.03:659,72,0	1/1:2,22:24:57.02:522,57,0	1/1:1,16:17:45.02:412,45,0	1/1:2,20:22:57.02:521,57,0	1/1:4,15:19:48:437,48,0	1/1:0,17:17:48.03:439,48,0	1/1:2,20:22:66.04:604,66,0	1/1:7,20:27:69.02:625,69,0	1/1:1,12:13:36.02:329,36,0	1/1:3,21:24:63.01:573,63,0	1/1:0,19:19:48.01:439,48,0	1/1:2,12:14:27:247,27,0	1/1:1,12:13:32.53:324,33,0	1/1:3,21:24:57.01:522,57,0	0/1:5,5:10:4.83:95,0,5	1/1:3,13:16:36.01:329,36,0	1/1:2,14:16:42.01:384,42,0	1/1:5,33:38:99:906,99,0	1/1:0,5:5:11.80:95,12,0
chr10	25820343	.	T	TATAGC	43731.74	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-7.041;DP=618;FS=3.901;HRun=0;HaplotypeScore=104.6877;InbreedingCoeff=0.9914;MQ=65.66;MQ0=0;MQRankSum=-6.808;QD=76.45;ReadPosRankSum=3.624;VQSLOD=6.5888;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,15:19:45.15:1410,45,0	1/1:1,7:8:24.08:726,24,0	0/0:14,0:14:42.01:0,42,821	0/0:9,0:8:18.03:0,18,325	1/1:4,26:29:66.21:2049,66,0	1/1:4,19:24:60.21:1917,60,0	1/1:2,7:9:18.06:579,18,0	1/1:17,15:34:90.30:2690,90,0	1/1:7,18:26:66.23:2093,66,0	1/1:6,28:36:99:3149,102,0	1/1:6,21:27:57.17:1764,57,0	1/1:5,9:14:42.13:1169,42,0	1/1:8,18:27:69.24:2134,69,0	1/1:6,17:23:57.18:1758,57,0	0/0:23,0:23:66.21:0,66,1395	1/1:13,23:36:93.32:2857,93,0	1/1:7,17:27:60.18:1762,60,0	1/1:3,6:9:21.07:677,21,0	1/1:3,19:22:60.04:1936,60,0	1/1:8,23:31:72.23:2221,72,0	1/1:3,12:14:33.11:1063,33,0	1/1:1,14:18:42.14:1353,42,0	1/1:9,19:28:54.19:1741,54,0	1/1:1,9:11:27.09:848,27,0	1/1:2,15:18:48.16:1506,48,0	1/1:3,24:28:78.26:2437,78,0	1/1:12,25:40:96.31:2922,96,0	1/1:0,10:11:30.10:968,30,0
chr10	25820544	.	GTTC	G	956.30	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-3.724;DP=684;FS=1.695;HRun=0;HaplotypeScore=168.0876;InbreedingCoeff=0.9959;MQ=83.93;MQ0=0;MQRankSum=-0.419;QD=39.85;ReadPosRankSum=1.528;VQSLOD=4.7537;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,117,2469	0/0:17,0:17:42.14:0,42,913	0/0:19,0:19:51:0,51,976	0/0:28,0:28:58.23:0,58,1155	0/0:27,0:27:66.19:0,66,1315	0/0:19,0:19:54.17:0,54,1124	0/0:18,0:18:54.15:0,54,1074	0/0:36,0:36:93.30:0,93,1919	0/0:30,0:30:84.29:0,84,1786	0/0:33,0:33:96.26:0,96,2000	0/0:17,0:17:48.04:0,48,913	0/0:26,0:26:75.26:0,75,1632	0/0:19,0:19:57.20:0,57,1236	0/0:16,0:16:45.14:0,45,939	1/1:1,23:24:66.22:1051,66,0	0/0:34,0:34:93.25:0,93,1920	0/0:28,0:28:75.23:0,75,1517	0/0:18,0:18:48.12:0,48,932	0/0:24,0:24:57.17:0,57,1111	0/0:24,0:24:72.25:0,72,1547	0/0:29,0:29:87.28:0,87,1833	0/0:22,0:22:63.12:0,63,1284	0/0:22,0:22:63.17:0,63,1248	0/0:37,0:37:99:0,105,2152	0/0:17,0:17:45.13:0,45,936	0/0:26,0:26:66.07:0,66,1278	0/0:28,0:28:81.21:0,81,1679	0/0:7,0:7:21.07:0,21,457
chr10	25820628	.	TA	T	17514.83	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-4.959;DP=725;FS=10.761;HRun=3;HaplotypeScore=86.9485;InbreedingCoeff=0.9957;MQ=82.19;MQ0=0;MQRankSum=-4.792;QD=31.50;ReadPosRankSum=6.160;VQSLOD=3.9762;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,126,1775	1/1:1,9:10:21.07:260,21,0	0/0:21,0:21:59.83:0,60,785	0/0:21,0:21:63.21:0,63,885	1/1:2,27:29:60.10:721,60,0	1/1:0,21:21:48.15:594,48,0	1/1:0,19:19:51.16:632,51,0	0/0:32,0:32:93.27:0,93,1259	1/1:2,43:45:99:1412,114,0	1/1:0,31:31:87.22:1075,87,0	1/1:0,16:16:33.02:388,33,0	1/1:7,36:43:99:1362,111,0	1/1:0,23:23:66.21:818,66,0	1/1:1,29:30:87.27:1077,87,0	0/0:24,0:24:66.17:0,66,895	1/1:1,39:40:99:1412,114,0	0/0:27,0:27:75.17:0,75,1035	1/1:1,30:31:41.10:960,41,0	1/1:0,17:17:51.14:618,51,0	1/1:1,19:20:48.04:556,48,0	1/1:7,22:29:78.17:912,78,0	1/1:1,27:28:71.97:890,72,0	1/1:0,18:18:39.03:462,39,0	1/1:0,29:29:81.25:1003,81,0	1/1:0,5:5:15.05:186,15,0	1/1:3,26:29:78.23:952,78,0	1/1:1,27:28:72.23:892,72,0	1/1:0,15:15:27.08:334,27,0
chr10	25820952	.	C	CTTGAAGATCAT	5200.27	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=8.965;DP=292;FS=31.535;HRun=0;HaplotypeScore=165.9704;InbreedingCoeff=0.8484;MQ=88.96;MQ0=0;MQRankSum=-9.567;QD=20.80;ReadPosRankSum=4.055;VQSLOD=2.2346;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,6:10:27.02:1308,27,0	1/1:8,0:8:17.26:67,17,0	0/0:15,0:15:39.02:0,39,1186	0/0:17,0:17:51.15:0,51,1595	1/1:15,0:15:27.39:88,27,0	1/1:11,0:11:20.37:57,20,0	1/1:10,0:10:10.18:29,10,0	1/1:13,4:18:45.12:2079,45,0	1/1:6,0:6:10.19:29,10,0	1/1:12,0:12:26.31:100,26,0	1/1:10,0:10:18.33:51,18,0	1/1:6,0:6:13.53:69,14,0	1/1:14,0:14:26.04:72,26,0	1/1:11,0:11:16.63:48,17,0	0/0:10,0:10:30.09:0,30,973	1/1:6,0:6:10.19:29,10,0	1/1:2,2:6:9.03:463,9,0	1/1:5,0:4:11.12:43,11,0	1/1:9,0:9:16.50:81,17,0	1/1:8,0:8:11.78:54,12,0	1/1:6,0:6:9.11:43,9,0	1/1:13,0:13:22.19:62,22,0	1/1:7,0:7:14.26:40,14,0	1/1:9,0:9:15.22:60,15,0	1/1:7,0:7:10.19:29,10,0	1/1:11,0:11:24.79:107,25,0	1/1:21,0:21:32.37:91,32,0	1/1:11,0:11:24.10:101,24,0
chr10	25820953	.	T	TTGAA	17553.55	PASS	AB=1.000;AC=49;AF=0.875;AN=56;BaseQRankSum=7.773;DP=302;FS=35.924;HRun=0;HaplotypeScore=95.3032;InbreedingCoeff=0.7445;MQ=88.71;MQ0=0;MQRankSum=-9.644;QD=67.77;ReadPosRankSum=4.059;VQSLOD=3.7478;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,0:10:27.02:437,27,0	1/1:1,7:8:24.07:633,24,0	0/0:15,0:15:41.86:0,42,771	0/0:18,0:18:51.18:0,51,1050	1/1:0,14:15:42.10:1095,42,0	1/1:0,10:11:30.10:866,30,0	1/1:2,5:10:21.06:544,21,0	0/1:15,0:15:42.42:532,0,42	1/1:0,5:5:15.05:433,15,0	1/1:1,11:13:39.05:950,39,0	1/1:1,9:11:27.08:778,27,0	1/1:2,5:7:18.06:470,18,0	1/1:0,13:14:39.13:1123,39,0	1/1:1,8:12:27.09:767,27,0	0/0:10,0:10:30.09:0,30,591	1/1:0,5:6:15.05:433,15,0	1/1:4,0:4:0.26:95,0,0	1/1:2,4:5:18.02:418,18,0	1/1:2,7:10:27.07:693,27,0	1/1:2,6:9:27.08:706,27,0	1/1:0,4:6:12.04:346,12,0	1/1:1,12:14:36.12:1002,36,0	1/1:1,7:8:24.08:677,24,0	1/1:2,8:11:27.09:777,27,0	1/1:0,6:7:15.05:433,15,0	1/1:2,10:13:39.12:1033,39,0	1/1:1,16:22:51.17:1425,51,0	1/1:3,9:12:36.09:886,36,0
chr10	25820991	.	A	AC	8231.77	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=6.705;DP=235;FS=8.355;HRun=1;HaplotypeScore=94.5323;InbreedingCoeff=0.8109;MQ=78.98;MQ0=0;MQRankSum=-7.904;QD=39.58;ReadPosRankSum=3.349;VQSLOD=5.0412;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,8:9:21.07:313,21,0	1/1:0,7:7:21.07:314,21,0	0/0:8,0:8:20.43:0,20,242	0/0:13,0:13:36.12:0,36,467	1/1:1,14:15:39.13:583,39,0	1/1:1,8:9:24.08:358,24,0	1/1:0,5:5:15.05:224,15,0	1/1:2,22:24:68.46:1025,68,0	1/1:1,1:2:3.01:45,3,0	1/1:0,9:9:27.09:405,27,0	1/1:0,15:15:45.15:673,45,0	1/1:1,4:5:12.04:179,12,0	1/1:1,10:11:33.11:493,33,0	1/1:0,6:6:18.06:268,18,0	0/0:6,0:6:15.05:0,15,195	1/1:0,6:6:18.06:268,18,0	1/1:0,5:5:12.04:177,12,0	1/1:0,6:5:18.06:255,18,0	1/1:2,5:7:21.05:286,21,0	1/1:2,10:12:30.10:436,30,0	1/1:1,2:3:3.01:45,3,0	1/1:4,6:10:15.05:224,15,0	1/1:0,5:5:15.05:224,15,0	1/1:0,4:4:9.03:135,9,0	1/1:1,4:5:12.04:180,12,0	1/1:1,8:9:24.08:359,24,0	1/1:2,9:11:27.09:404,27,0	1/1:0,8:8:24.08:359,24,0
chr10	25821020	.	C	CTTATTTTTTA	7604.42	PASS	AB=1.000;AC=45;AF=0.865;AN=52;BaseQRankSum=1.096;DP=191;FS=0.000;HRun=0;HaplotypeScore=97.5350;InbreedingCoeff=0.5263;MQ=50.97;MQ0=1;MQRankSum=-4.130;QD=42.96;ReadPosRankSum=-0.449;VQSLOD=3.9288;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:8,0:8:44.97:98,0,45	1/1:2,2:4:12.04:424,12,0	0/0:4,0:3:5.91:0,6,69	0/0:2,0:2:3.01:0,3,56	1/1:8,1:9:24.04:601,24,0	1/1:5,1:6:14.98:397,15,0	1/1:4,0:4:12.03:202,12,0	1/1:28,0:28:50.94:315,51,0	1/1:2,0:2:3.01:157,3,0	1/1:6,1:7:18.03:457,18,0	1/1:14,0:14:35.98:558,36,0	1/1:3,1:4:5.98:177,6,0	1/1:5,1:6:9.03:270,9,0	1/1:6,0:6:12.04:224,12,0	0/0:3,0:6:11.90:0,12,143	1/1:4,0:4:6.02:117,6,0	1/1:4,0:4:11.97:176,12,0	1/1:7,0:15:24.08:557,24,0	1/1:11,0:11:24.08:494,24,0	1/1:7,5:12:27.05:865,27,0	./.	1/1:3,0:3:5.98:78,6,0	1/1:5,0:5:8.94:98,9,0	./.	1/1:6,0:6:12.04:239,12,0	1/1:4,0:4:12:216,12,0	1/1:7,1:8:15.01:452,15,0	1/1:6,1:7:20.97:433,21,0
chr10	25821023	.	A	AT	2827.11	PASS	AB=0.882;AC=34;AF=0.654;AN=52;BaseQRankSum=3.777;DP=173;FS=19.845;HRun=2;HaplotypeScore=70.0603;InbreedingCoeff=-0.0439;MQ=48.58;MQ0=2;MQRankSum=-2.601;QD=17.56;ReadPosRankSum=5.348;VQSLOD=2.4093;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,3:8:17.09:212,17,0	1/1:4,0:4:11.29:92,11,0	0/0:4,0:3:6.02:0,6,70	0/0:1,0:1:3.01:0,3,37	0/1:8,0:9:23.52:174,0,24	1/1:4,0:6:10.60:122,11,0	1/1:4,0:4:10.27:118,10,0	0/1:10,13:22:92.21:443,0,92	0/0:2,0:2:3.01:0,3,34	0/1:5,0:7:22.15:107,0,22	0/1:13,0:13:7.23:279,0,7	1/1:4,0:4:3.15:12,3,0	0/1:5,0:5:25.24:71,0,25	1/1:4,1:5:12.04:144,12,0	0/0:5,0:5:6.96:0,7,76	1/1:1,1:2:6.02:77,6,0	1/1:2,2:4:9.03:124,9,0	0/1:12,0:14:44.59:161,0,45	1/1:11,0:11:21.06:256,21,0	0/1:10,0:10:10.64:131,0,11	./.	1/1:3,0:3:3.01:38,3,0	1/1:4,0:5:3.01:38,3,0	./.	0/1:4,0:6:55.26:76,0,55	0/1:4,0:4:26.20:67,0,26	0/1:6,1:7:25.24:78,0,25	1/1:7,0:7:14.21:163,14,0
chr10	25821557	.	A	ACCATCC	7230.58	PASS	AB=0.943;AC=43;AF=0.768;AN=56;BaseQRankSum=6.005;DP=310;FS=26.474;HRun=0;HaplotypeScore=77.8915;InbreedingCoeff=0.1699;MQ=61.17;MQ0=20;MQRankSum=-4.665;QD=27.92;ReadPosRankSum=1.462;VQSLOD=2.2726;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:14:23.87:498,24,0	1/1:4,0:3:9.03:232,9,0	0/0:25,0:21:48.11:0,48,1195	0/0:19,0:9:21.07:0,21,412	1/1:10,0:10:9.03:211,9,0	1/1:7,0:6:5.67:128,6,0	1/1:10,8:16:8.97:190,9,0	0/1:20,0:18:99:602,0,163	1/1:12,0:11:17.63:441,18,0	0/1:8,0:7:48.36:393,0,48	1/1:4,0:4:6.02:134,6,0	1/1:13,0:12:18.02:422,18,0	1/1:10,1:11:9.31:221,9,0	1/1:15,0:14:9.50:208,10,0	0/0:7,0:7:8.99:0,9,213	1/1:9,0:8:21.07:498,21,0	1/1:12,0:11:20.99:396,21,0	0/1:9,0:9:99:233,0,128	0/1:9,0:9:60.45:535,0,60	1/1:0,2:2:3.01:75,3,0	1/1:16,0:13:2.26:72,2,0	1/1:9,0:9:12.04:291,12,0	0/1:6,0:6:15.79:132,0,16	0/1:14,0:13:48.15:132,0,48	1/1:7,0:6:12.04:288,12,0	1/1:12,0:11:24.08:633,24,0	1/1:10,0:9:9:195,9,0	0/1:1,2:3:30.26:68,0,30
chr10	25821561	.	A	AT	331.40	PASS	AB=0.913;AC=37;AF=0.661;AN=56;BaseQRankSum=5.061;DP=244;FS=9.577;HRun=0;HaplotypeScore=64.6499;InbreedingCoeff=0.1675;MQ=47.59;MQ0=25;MQRankSum=-2.297;QD=1.74;ReadPosRankSum=-0.836;VQSLOD=0.8180;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:13,4:13:13.30:25,0,13	1/1:2,0:1:2.96:19,3,0	0/0:20,0:16:47.81:0,48,613	0/0:15,0:6:18.05:0,18,236	1/1:3,4:7:7.69:29,8,0	1/1:5,1:5:2.80:13,3,0	0/1:16,0:13:4.83:5,0,8	0/1:12,4:14:43.67:44,0,212	1/1:8,1:8:8.08:37,8,0	0/1:3,4:6:26.50:66,0,26	1/1:2,1:3:2.50:9,2,0	1/1:7,2:10:10.77:46,11,0	1/1:9,0:8:2.13:11,2,0	1/1:12,0:10:2.31:10,2,0	0/0:7,0:7:11.07:0,11,131	1/1:3,2:4:3.78:22,4,0	1/1:7,1:7:2.12:21,2,0	0/0:6,0:6:13.59:0,14,166	0/0:5,0:4:3.49:0,3,100	1/1:2,0:2:2.84:14,3,0	0/1:14,0:11:2.25:9,0,2	1/1:5,3:8:8.09:34,8,0	1/1:2,1:3:2.60:10,3,0	0/1:11,0:9:5.22:5,0,34	1/1:2,1:2:2.68:11,3,0	0/1:8,0:7:2:41,0,2	0/1:10,0:8:4.09:4,0,49	0/1:3,0:3:4.35:4,0,15
chr10	25821694	.	T	TTGTC	10237.84	PASS	AB=0.625;AC=43;AF=0.768;AN=56;BaseQRankSum=-3.038;DP=370;FS=7.414;HRun=0;HaplotypeScore=75.8031;InbreedingCoeff=0.8002;MQ=70.56;MQ0=1;MQRankSum=-2.943;QD=37.78;ReadPosRankSum=5.053;VQSLOD=4.3465;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:10:24.08:0,24,393	1/1:0,6:5:15.05:361,15,0	0/0:28,0:28:27.06:0,27,393	0/0:16,0:13:23.75:0,24,352	1/1:6,10:15:33.11:793,33,0	1/1:2,10:11:18.06:438,18,0	1/1:5,4:8:3.01:73,3,0	0/0:18,0:17:36.12:0,36,590	1/1:4,7:9:9.03:219,9,0	1/1:5,8:9:18.06:439,18,0	1/1:0,7:7:15.05:363,15,0	1/1:1,12:11:30.10:730,30,0	1/1:0,6:4:12.04:292,12,0	1/1:4,4:8:9.03:219,9,0	0/0:18,0:14:36.12:0,36,590	1/1:6,6:8:12.04:292,12,0	0/0:7,0:7:15.04:0,15,246	1/1:3,6:9:12.04:292,12,0	1/1:6,2:8:9.03:205,9,0	1/1:1,11:12:24.08:584,24,0	1/1:11,14:26:36.12:870,36,0	1/1:4,13:15:33.11:803,33,0	1/1:5,13:15:27.09:657,27,0	1/1:4,10:14:27.09:658,27,0	1/1:4,9:10:24.08:584,24,0	1/1:6,14:15:30.10:731,30,0	0/1:6,9:12:28.09:417,0,28	1/1:2,3:5:9.03:219,9,0
chr10	25821724	.	ATATC	A	576.37	PASS	AB=1.000;AC=21;AF=0.955;AN=22;BaseQRankSum=-0.173;DP=306;FS=0.000;HRun=0;HaplotypeScore=93.5664;InbreedingCoeff=0.0254;MQ=50.05;MQ0=14;MQRankSum=-1.214;QD=4.37;ReadPosRankSum=-1.041;VQSLOD=1.5742;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	./.	./.	1/1:5,0:6:3:28,3,0	./.	1/1:7,0:7:3:28,3,0	./.	1/1:10,0:10:1:24,1,0	1/1:12,0:11:3:28,3,0	./.	./.	1/1:15,5:15:6.02:91,6,0	./.	0/1:7,0:6:0:0,0,0	1/1:5,4:9:12.04:183,12,0	./.	./.	./.	1/1:14,0:16:5.98:49,6,0	1/1:11,0:10:3:28,3,0	1/1:11,4:15:11.86:161,12,0	./.	1/1:12,0:11:3:28,3,0	./.	./.
chr10	25821893	.	CTATA	C	506.26	PASS	AC=18;AF=0.643;AN=28;BaseQRankSum=0.629;DP=173;FS=20.002;HRun=0;HaplotypeScore=23.8507;InbreedingCoeff=0.5281;MQ=51.69;MQ0=39;MQRankSum=0.426;QD=12.35;ReadPosRankSum=2.454;VQSLOD=1.0914;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:16:3.01:0,3,52	./.	0/0:23,0:7:20.39:0,20,185	0/0:9,0:3:9.03:0,9,161	1/1:2,2:2:3.01:53,3,0	./.	./.	0/0:17,1:6:15.05:0,15,268	./.	1/1:3,5:2:6.02:106,6,0	./.	./.	1/1:0,4:2:3.01:53,3,0	./.	0/0:10,11:12:9.03:0,9,196	./.	./.	1/1:2,1:2:3.01:53,3,0	./.	1/1:0,1:1:3.01:53,3,0	./.	./.	./.	1/1:1,1:1:3.01:53,3,0	1/1:1,5:2:3.01:53,3,0	1/1:2,7:5:9.03:147,9,0	1/1:0,4:1:3.01:53,3,0	./.
chr10	25821946	.	CATCT	C	1385.12	PASS	AC=26;AF=1.000;AN=26;DP=160;FS=0.000;HRun=0;HaplotypeScore=34.5275;InbreedingCoeff=-0.1424;MQ=20.48;MQ0=68;QD=21.99;VQSLOD=2.3326;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	1/1:1,6:6:3.01:53,3,0	1/1:0,1:1:3.01:53,3,0	1/1:0,1:1:3.01:53,3,0	./.	./.	1/1:1,6:6:18.06:320,18,0	1/1:1,3:3:3.01:53,3,0	./.	./.	./.	./.	./.	1/1:8,2:2:3.01:53,3,0	1/1:1,1:1:3.01:53,3,0	./.	1/1:0,3:3:3.01:35,3,0	./.	1/1:3,11:12:24.08:409,24,0	1/1:0,3:3:9.03:142,9,0	./.	1/1:1,3:3:3.01:53,3,0	1/1:2,3:4:8.96:125,9,0	1/1:0,2:2:3.01:53,3,0	./.
chr10	25821996	.	T	TTATC	595.99	PASS	AB=0.704;AC=11;AF=0.458;AN=24;BaseQRankSum=-2.475;DP=162;FS=10.193;HRun=0;HaplotypeScore=46.9530;InbreedingCoeff=0.2740;MQ=21.55;MQ0=64;MQRankSum=-2.529;QD=12.96;ReadPosRankSum=0.408;VQSLOD=1.1140;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:11,8:10:18.61:524,0,19	./.	./.	./.	1/1:8,0:6:3.01:46,3,0	0/0:1,0:1:2.90:0,3,16	./.	./.	./.	1/1:9,0:5:2.74:12,3,0	1/1:7,0:5:2.92:17,3,0	./.	./.	./.	0/0:28,0:13:18.02:0,18,248	./.	0/0:9,0:4:3:0,3,27	./.	./.	./.	./.	0/0:12,0:12:2.97:0,3,20	./.	0/0:1,0:1:2.74:0,3,12	0/0:7,0:5:2.80:0,3,13	1/1:2,0:2:3.01:48,3,0	./.	1/1:1,0:1:3.01:48,3,0
chr10	25822214	.	CATCT	C	404.31	PASS	AC=8;AF=0.80;AN=10;BaseQRankSum=-0.696;DP=86;FS=0.000;HRun=0;HaplotypeScore=18.8702;MQ=15.00;MQ0=59;MQRankSum=-1.044;QD=44.92;ReadPosRankSum=0.696;VQSLOD=3.0174;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	./.	./.	./.	./.	./.	1/1:0,2:2:6.02:107,6,0	./.	./.	./.	./.	./.	./.	./.	./.	0/0:2,0:1:2.96:0,3,19	./.	./.	./.	1/1:0,1:1:3.01:53,3,0	./.	1/1:0,3:3:9.03:160,9,0	1/1:0,3:3:9.03:160,9,0	./.	./.
chr10	25822474	.	CATCT	C	5783.30	PASS	AC=38;AF=0.826;AN=46;BaseQRankSum=5.539;DP=368;FS=0.000;HRun=0;HaplotypeScore=107.4979;InbreedingCoeff=0.7488;MQ=32.52;MQ0=81;MQRankSum=-2.564;QD=26.53;ReadPosRankSum=1.295;VQSLOD=4.6810;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	1/1:1,3:4:12.03:185,12,0	./.	./.	1/1:3,14:17:18.94:262,19,0	1/1:3,8:11:24.06:380,24,0	1/1:4,2:6:6.02:89,6,0	0/0:37,0:21:15.64:0,16,1292	1/1:4,8:10:21.05:338,21,0	1/1:7,9:16:42.03:661,42,0	1/1:3,7:10:16.18:333,16,0	1/1:5,10:15:21.07:349,21,0	1/1:5,7:12:15.05:249,15,0	1/1:1,7:7:9.03:160,9,0	0/0:29,0:16:24.08:0,24,602	1/1:3,7:9:12.04:196,12,0	0/0:14,2:10:5.98:0,6,89	1/1:3,3:6:11.99:179,12,0	1/1:6,2:3:6:77,6,0	1/1:5,12:17:39.10:600,39,0	0/0:5,0:5:2.88:0,3,15	1/1:1,7:8:18.04:237,18,0	1/1:5,13:18:27.06:385,27,0	./.	./.	1/1:7,4:10:4.01:295,4,0	1/1:8,16:23:45.14:679,45,0	1/1:2,3:5:9.03:128,9,0
chr10	25822524	.	T	TTATCTATC	8202.52	PASS	AB=0.700;AC=48;AF=0.960;AN=50;BaseQRankSum=0.354;DP=502;FS=0.000;HRun=0;HaplotypeScore=172.4896;InbreedingCoeff=0.0991;MQ=38.33;MQ0=72;MQRankSum=-0.186;QD=17.38;ReadPosRankSum=-1.109;VQSLOD=3.7446;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:24:21.07:510,21,0	1/1:2,6:9:6.02:242,6,0	./.	./.	1/1:13,8:25:5.50:196,6,0	1/1:6,8:18:12.04:484,12,0	./.	1/1:59,0:36:1.77:4,2,0	1/1:16,0:19:30.07:751,30,0	1/1:11,0:17:24.08:563,24,0	1/1:13,0:17:17.57:281,18,0	1/1:15,0:15:18.06:394,18,0	1/1:9,0:16:21.54:724,22,0	1/1:9,0:10:8.32:172,8,0	1/1:14,0:12:11.97:97,12,0	0/1:9,0:11:79.32:79,0,129	1/1:16,0:26:41.94:388,42,0	0/1:4,0:12:55.48:105,0,55	1/1:4,0:7:14.97:122,15,0	1/1:9,0:21:29.93:243,30,0	1/1:7,0:7:0.47:1,0,0	1/1:14,0:15:12.04:312,12,0	1/1:13,0:26:26.84:269,27,0	1/1:5,0:5:3.01:69,3,0	1/1:0,10:14:18.04:619,18,0	1/1:11,0:23:57.15:1203,57,0	1/1:14,8:24:9.01:256,9,0	1/1:3,1:4:3.01:117,3,0
chr10	25824088	.	TTCTCTCTCTCTC	T	8764.34	PASS	AB=0.847;AC=38;AF=0.760;AN=50;BaseQRankSum=2.980;DP=470;FS=20.944;HRun=0;HaplotypeScore=167.9445;InbreedingCoeff=0.6104;MQ=54.09;MQ0=13;MQRankSum=-3.389;QD=27.82;ReadPosRankSum=3.638;VQSLOD=2.8771;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:17:21.05:0,21,505	1/1:6,2:8:6.02:207,6,0	./.	0/0:17,0:10:0.47:0,0,1	1/1:13,3:17:20.26:445,20,0	1/1:15,9:24:33.11:965,33,0	0/1:15,2:17:73.99:328,0,74	0/0:42,0:40:32.61:0,33,1232	1/1:13,3:16:15.05:489,15,0	1/1:11,3:14:9.03:311,9,0	1/1:11,6:15:21.07:672,21,0	1/1:7,2:9:5.99:207,6,0	1/1:16,3:19:15.05:516,15,0	1/1:13,8:20:27.09:907,27,0	0/0:22,0:22:18.06:0,18,937	1/1:8,6:16:24.08:749,24,0	0/0:23,0:23:27.09:0,27,1198	1/1:11,2:13:6.02:207,6,0	1/1:15,2:15:6.02:207,6,0	1/1:8,5:15:24.07:710,24,0	./.	1/1:14,1:15:12.03:263,12,0	1/1:11,4:15:15.05:502,15,0	1/1:6,7:13:12.04:396,12,0	1/1:14,2:16:9.02:232,9,0	1/1:14,3:16:15.04:408,15,0	0/1:12,0:15:14.28:44,0,14	./.
chr10	25824142	.	T	TCAAACAAA	23160.05	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-1.555;DP=477;FS=1.528;HRun=0;HaplotypeScore=164.9174;InbreedingCoeff=0.9327;MQ=56.43;MQ0=7;MQRankSum=-7.543;QD=58.48;ReadPosRankSum=-0.407;VQSLOD=4.7058;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,0:20:36:356,36,0	1/1:3,0:3:5.91:38,6,0	0/0:34,0:27:38.21:0,38,729	0/0:35,0:16:22.88:0,23,599	1/1:9,12:21:39.04:1312,39,0	1/1:11,12:24:38.83:1378,39,0	1/1:10,10:20:36.12:1430,36,0	1/1:7,0:18:32.27:250,32,0	1/1:8,4:14:27.08:804,27,0	1/1:7,10:17:42.11:1275,42,0	1/1:11,10:21:51.11:1794,51,0	1/1:5,10:15:36.03:1253,36,0	1/1:6,7:16:23.44:809,23,0	1/1:10,7:18:26.92:790,27,0	0/0:2,0:9:21.07:0,21,388	1/1:11,9:21:53.93:1701,54,0	1/1:6,0:18:37.10:289,37,0	1/1:8,1:8:17.96:271,18,0	1/1:3,11:15:39.10:1151,39,0	1/1:10,6:18:43.83:1203,44,0	1/1:1,6:7:9.03:314,9,0	1/1:3,5:10:24.01:840,24,0	1/1:7,7:14:38.37:1114,38,0	1/1:7,7:14:28.85:505,29,0	1/1:9,5:14:27.05:978,27,0	1/1:7,14:21:42.13:1556,42,0	1/1:8,9:17:33.08:1104,33,0	1/1:2,6:8:17.73:645,18,0
chr10	25824314	.	A	AAAAT	23379.57	PASS	AB=0.769;AC=47;AF=0.839;AN=56;BaseQRankSum=-8.988;DP=588;FS=9.160;HRun=0;HaplotypeScore=80.4506;InbreedingCoeff=0.6304;MQ=65.14;MQ0=9;MQRankSum=-3.981;QD=44.45;ReadPosRankSum=5.048;VQSLOD=4.9715;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:4,0:12:3.03:95,0,3	1/1:1,7:7:11.93:259,12,0	0/0:20,0:18:17.05:0,17,524	0/0:23,0:22:57.90:0,58,733	1/1:3,21:24:60:1375,60,0	1/1:1,29:29:51.18:1348,51,0	1/1:3,16:19:30.10:802,30,0	0/1:35,0:30:99:175,0,324	1/1:1,15:17:39.13:1050,39,0	1/1:3,27:29:69.17:1535,69,0	1/1:3,26:29:74.93:1599,75,0	1/1:0,12:14:21.07:564,21,0	1/1:6,8:13:36.10:843,36,0	1/1:4,10:15:30.10:759,30,0	0/0:19,0:19:54.01:0,54,859	1/1:1,18:20:33.11:887,33,0	0/1:7,0:12:14.62:15,0,117	1/1:2,28:30:54.15:1396,54,0	1/1:3,16:19:54.01:970,54,0	1/1:3,24:25:56.88:1188,57,0	1/1:2,13:15:36.06:908,36,0	1/1:5,15:21:47.82:963,48,0	1/1:0,23:23:60.03:1490,60,0	1/1:1,15:16:24.08:647,24,0	1/1:3,17:21:43.03:1134,43,0	1/1:4,17:21:51.10:1108,51,0	1/1:2,30:34:60.21:1567,60,0	1/1:1,8:12:27.09:704,27,0
chr10	25824337	.	A	AC	198.83	PASS	AB=0.933;AC=5;AF=0.089;AN=56;BaseQRankSum=0.625;DP=579;FS=0.699;HRun=0;HaplotypeScore=124.0071;InbreedingCoeff=-0.0825;MQ=62.02;MQ0=9;MQRankSum=-2.856;QD=1.95;ReadPosRankSum=-5.776;VQSLOD=0.5848;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:10,1:11:21.30:21,0,145	0/0:7,0:6:14.70:0,15,145	0/0:27,0:24:67.40:0,67,753	0/0:22,0:19:44.43:0,44,552	0/0:28,0:27:60.03:0,60,571	0/0:22,0:21:34.47:0,34,285	0/0:17,0:16:41.17:0,41,350	0/1:20,10:25:99:252,0,394	0/0:23,0:22:52.20:0,52,419	0/1:26,0:24:23.31:23,0,271	0/0:32,0:31:69.38:0,69,709	0/1:16,0:16:0.82:1,0,254	0/1:19,0:18:1.91:2,0,285	0/0:18,0:18:25.07:0,25,435	0/0:18,0:18:54.14:0,54,719	0/0:18,0:18:18.13:0,18,229	0/0:9,0:9:14.86:0,15,224	0/0:25,0:24:53.53:0,54,292	0/0:19,0:19:26.44:0,26,478	0/0:25,0:23:44:0,44,466	0/0:14,0:14:32.49:0,32,166	0/0:25,0:25:14.39:0,14,460	0/0:21,0:21:52.06:0,52,278	0/0:13,0:13:29.39:0,29,193	0/0:26,0:26:63.37:0,63,513	0/0:22,0:21:37.78:0,38,437	0/0:31,0:31:68.90:0,69,512	0/0:15,0:15:32.22:0,32,246
chr10	25824926	.	CT	C	357.25	PASS	AB=0.821;AC=7;AF=0.125;AN=56;BaseQRankSum=4.675;DP=518;FS=20.918;HRun=14;HaplotypeScore=68.6848;InbreedingCoeff=0.1971;MQ=74.50;MQ0=0;MQRankSum=1.142;QD=3.13;ReadPosRankSum=2.231;VQSLOD=-0.7350;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:22:22.72:0,23,121	0/0:6,1:9:0.27:0,0,116	0/0:17,0:14:2.38:0,2,13	0/1:15,0:12:5.35:5,0,60	0/0:20,0:22:23.80:0,24,259	0/0:22,3:25:12.87:0,13,397	0/0:21,2:23:8.86:0,9,332	0/1:20,10:29:1.76:174,0,2	0/0:17,0:17:12.20:0,12,202	0/0:17,1:19:15.29:0,15,269	0/1:21,3:25:39.12:39,0,250	1/1:4,3:9:12.10:72,12,0	0/0:11,0:11:20.97:0,21,172	0/0:15,1:16:9.39:0,9,211	0/1:10,7:17:48.02:82,0,48	0/0:12,1:13:12.41:0,12,244	0/1:13,5:18:45.94:113,0,46	0/0:12,0:13:26.83:0,27,224	0/0:18,1:21:14.25:0,14,260	0/0:19,2:22:17.17:0,17,293	0/0:17,2:23:18.25:0,18,405	0/0:19,0:22:48.22:0,48,397	0/0:19,0:20:24.04:0,24,232	0/0:19,0:19:44.98:0,45,396	0/0:15,0:15:21.01:0,21,189	0/0:16,0:18:17.17:0,17,183	0/0:19,2:22:14.85:0,15,414	0/0:8,0:9:20.86:0,21,182
chr10	25824927	.	T	TTA	203.12	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-0.088;DP=528;FS=4.456;HRun=0;HaplotypeScore=93.3566;InbreedingCoeff=0.9220;MQ=73.33;MQ0=0;MQRankSum=-0.317;QD=10.16;ReadPosRankSum=1.648;VQSLOD=3.0677;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,16:20:23.52:296,24,0	0/0:10,0:10:23.76:0,24,239	0/0:20,0:14:8.37:0,8,97	0/0:15,0:12:20.70:0,21,218	0/0:23,0:23:54.90:0,55,597	0/0:26,0:25:60.16:0,60,799	0/0:22,0:22:59.61:0,60,698	0/0:31,0:30:76.39:0,76,715	0/0:17,0:17:46.77:0,47,474	0/0:21,0:21:54:0,54,654	0/0:25,0:25:65.11:0,65,716	0/0:11,0:11:24.51:0,25,232	0/0:11,0:11:21.01:0,21,218	0/0:16,0:16:34.30:0,34,391	0/0:20,0:20:39.01:0,39,377	0/0:13,0:13:33.07:0,33,411	0/0:18,0:18:45.05:0,45,437	0/0:12,0:12:32.89:0,33,360	0/0:21,0:21:51.31:0,51,609	0/0:25,0:23:65.84:0,66,721	0/0:26,0:26:53.22:0,53,777	0/0:22,0:22:51.94:0,52,602	0/0:20,0:20:43.20:0,43,455	0/0:18,0:18:48.08:0,48,602	0/0:14,0:14:36.04:0,36,413	0/0:20,0:20:48.05:0,48,526	0/0:22,0:21:62.97:0,63,750	0/0:9,0:9:23.91:0,24,292
chr10	25825341	.	C	CT	11797.98	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-6.691;DP=495;FS=0.000;HRun=8;HaplotypeScore=45.6333;InbreedingCoeff=0.8934;MQ=67.02;MQ0=0;MQRankSum=-2.048;QD=25.59;ReadPosRankSum=1.764;VQSLOD=5.3447;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,19:21:35.23:570,35,0	1/1:3,10:13:27.08:309,27,0	0/0:10,0:8:15.01:0,15,137	0/0:8,0:7:2.17:0,2,111	1/1:8,27:35:78.10:851,78,0	1/1:1,31:32:75.22:866,75,0	1/1:4,11:15:27.08:312,27,0	1/1:3,18:20:54.14:603,54,0	1/1:4,12:17:29.92:326,30,0	1/1:2,20:22:60.18:692,60,0	1/1:2,20:22:54.12:603,54,0	1/1:2,10:12:30.09:346,30,0	1/1:3,14:17:33.10:381,33,0	1/1:2,13:15:33.10:381,33,0	0/0:16,0:16:45.02:0,45,412	1/1:2,11:13:33.10:381,33,0	1/1:1,27:28:75.22:863,75,0	1/1:5,19:24:42.12:485,42,0	1/1:2,13:15:39.12:450,39,0	1/1:3,10:13:30.01:317,30,0	1/1:4,6:10:18.05:208,18,0	1/1:0,7:7:20.98:225,21,0	1/1:1,11:12:23.90:277,24,0	1/1:2,15:17:39.12:450,39,0	1/1:6,24:30:63.19:727,63,0	1/1:1,12:13:36.09:404,36,0	1/1:5,25:30:38.75:700,39,0	1/1:3,4:7:9.39:74,9,0
chr10	25825565	.	CT	C	6610.86	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=0.584;DP=443;FS=7.625;HRun=11;HaplotypeScore=84.2976;InbreedingCoeff=0.9679;MQ=66.67;MQ0=5;MQRankSum=1.023;QD=19.85;ReadPosRankSum=3.425;VQSLOD=5.5981;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:70.77:0,71,366	1/1:1,6:7:14.98:123,15,0	0/0:15,0:9:7.50:0,7,138	0/0:12,0:8:17.95:0,18,167	1/1:1,27:28:68.87:564,69,0	1/1:3,15:18:44.94:369,45,0	1/1:1,7:7:11.99:98,12,0	0/0:6,0:17:34.86:0,35,217	1/1:2,13:15:29.96:246,30,0	1/1:2,20:22:57.78:469,58,0	1/1:2,12:14:36.44:282,36,0	1/1:0,10:10:26.97:221,27,0	1/1:3,12:15:35.95:295,36,0	1/1:1,20:21:59.93:492,60,0	0/0:17,0:17:45.09:0,45,465	1/1:0,11:11:32.96:270,33,0	0/0:5,0:16:28.70:0,29,155	1/1:0,11:11:29.97:246,30,0	1/1:4,14:19:44.94:368,45,0	1/1:2,22:24:59.65:478,60,0	1/1:5,11:16:29.96:246,30,0	1/1:3,7:9:14.97:123,15,0	1/1:1,13:14:32.96:270,33,0	1/1:1,12:12:29.96:246,30,0	1/1:1,12:13:35.96:295,36,0	1/1:3,8:11:23.97:197,24,0	1/1:1,21:22:53.94:443,54,0	1/1:0,11:11:32.96:271,33,0
chr10	25825576	.	T	TTA	5354.62	PASS	AB=1.000;AC=45;AF=0.804;AN=56;BaseQRankSum=5.985;DP=436;FS=3.399;HRun=0;HaplotypeScore=99.7610;InbreedingCoeff=0.8291;MQ=64.34;MQ0=5;MQRankSum=2.679;QD=14.75;ReadPosRankSum=3.716;VQSLOD=4.7843;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,23:29:74.61:1131,75,0	1/1:7,0:7:16.80:91,17,0	0/0:14,0:8:7.39:0,7,150	0/0:12,0:8:17.91:0,18,188	1/1:30,0:30:73.04:379,73,0	1/1:16,0:16:45.11:223,45,0	1/1:9,0:8:16.98:100,17,0	0/0:17,0:17:1.54:0,2,176	1/1:14,0:14:30.72:150,31,0	1/1:22,0:22:61.29:341,61,0	1/1:14,0:14:28.92:162,29,0	1/1:10,0:10:25.49:124,25,0	1/1:14,0:14:39.01:201,39,0	1/1:22,0:22:49.10:282,49,0	0/0:16,0:16:48.09:0,48,595	1/1:14,0:14:39.95:224,40,0	0/0:13,0:13:19.33:0,19,72	1/1:13,0:13:33.76:174,34,0	1/1:18,0:17:47.81:256,48,0	1/1:23,0:23:53.59:274,54,0	1/1:11,0:11:28.12:131,28,0	1/1:9,0:8:18.16:92,18,0	1/1:14,0:14:32.97:159,33,0	1/1:15,0:14:36.49:190,36,0	1/1:14,0:14:39.84:218,40,0	1/1:8,0:8:22.01:104,22,0	1/1:23,0:22:51.36:249,51,0	0/1:14,0:14:5.18:99,0,5
chr10	25827245	.	T	TG	1156.54	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=2.356;DP=442;FS=9.986;HRun=0;HaplotypeScore=77.8623;InbreedingCoeff=0.8131;MQ=57.60;MQ0=18;MQRankSum=5.531;QD=10.81;ReadPosRankSum=3.266;VQSLOD=3.4294;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,15:28:53.32:546,53,0	0/0:3,0:3:8.94:0,9,68	0/0:55,0:12:13.68:0,14,128	0/1:29,0:13:0.24:0,0,59	0/0:21,0:21:50.58:0,51,362	0/0:11,0:11:29.91:0,30,240	0/0:16,0:16:41.84:0,42,336	1/1:5,21:26:62.88:489,63,0	0/0:12,0:12:29.81:0,30,225	0/0:14,0:13:31.04:0,31,226	0/0:15,0:15:36.96:0,37,264	0/0:9,0:8:22.71:0,23,170	0/0:16,0:15:33.14:0,33,253	0/0:8,0:8:17.85:0,18,128	0/0:21,0:20:52.67:0,53,436	0/0:6,0:6:11.97:0,12,99	1/1:2,22:23:32.29:263,32,0	0/0:13,0:13:22.86:0,23,260	0/0:13,0:11:27:0,27,245	0/0:18,0:18:37.37:0,37,278	0/0:9,0:9:19.71:0,20,159	0/0:4,0:4:11.97:0,12,99	0/0:10,0:10:26.79:0,27,194	0/0:10,0:10:29.87:0,30,244	0/0:12,0:12:26.79:0,27,194	0/0:16,0:15:41.81:0,42,331	0/0:20,0:20:56.66:0,57,433	0/0:3,0:1:2.98:0,3,22
chr10	25827252	.	T	TG	449.60	PASS	AB=0.798;AC=5;AF=0.089;AN=56;BaseQRankSum=4.511;DP=513;FS=7.891;HRun=0;HaplotypeScore=101.9902;InbreedingCoeff=0.4557;MQ=58.47;MQ0=18;MQRankSum=4.036;QD=4.45;ReadPosRankSum=7.371;VQSLOD=1.9786;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:16,12:28:0.81:171,0,1	0/0:5,0:5:14.88:0,15,111	0/0:62,0:17:19.19:0,19,170	0/1:30,0:13:10.57:11,0,32	0/0:22,0:22:41.14:0,41,265	0/0:12,0:12:29.58:0,30,206	0/0:21,0:21:47.18:0,47,321	0/1:13,8:21:20.38:185,0,20	0/0:17,0:17:44.44:0,44,311	0/0:25,0:24:56.17:0,56,425	0/0:19,0:19:42.97:0,43,274	0/0:12,0:11:32.41:0,32,230	0/0:21,0:20:47.70:0,48,368	0/0:12,0:12:29.75:0,30,226	0/0:21,0:20:59.88:0,60,506	0/0:6,0:6:11.81:0,12,86	1/1:9,12:20:15.05:202,15,0	0/0:13,0:13:25.43:0,25,253	0/0:13,0:11:29.90:0,30,249	0/0:22,0:22:44:0,44,301	0/0:10,0:10:22.58:0,23,155	0/0:9,0:9:26.78:0,27,215	0/0:14,0:14:36.69:0,37,238	0/0:14,0:14:38.78:0,39,308	0/0:13,0:13:26.47:0,26,177	0/0:19,0:18:32.51:0,33,226	0/0:23,0:23:59.28:0,59,422	0/0:7,0:5:7.83:0,8,45
chr10	25827256	.	T	TG	446.86	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=1.963;DP=395;FS=35.597;HRun=0;HaplotypeScore=79.5069;InbreedingCoeff=0.6648;MQ=58.18;MQ0=16;MQRankSum=1.810;QD=15.96;ReadPosRankSum=1.984;VQSLOD=2.6145;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:16,12:28:61.39:541,61,0	0/0:3,0:3:5.96:0,6,44	0/0:53,0:13:26.41:0,26,173	0/0:27,0:10:10.51:0,11,76	0/0:15,0:15:30.78:0,31,177	0/0:6,0:6:13.99:0,14,79	0/0:15,0:15:28.47:0,28,161	0/0:22,0:22:48.38:0,48,341	0/0:12,0:12:23.28:0,23,165	0/0:20,0:19:45.82:0,46,366	0/0:14,0:14:31.57:0,32,199	0/0:6,0:5:11.65:0,12,84	0/0:12,0:11:20.97:0,21,177	0/0:8,0:8:17.68:0,18,142	0/0:20,0:19:56.22:0,56,439	0/0:6,0:6:8.35:0,8,47	0/0:18,0:17:35.06:0,35,222	0/0:7,0:7:8:0,8,105	0/0:9,0:7:20.70:0,21,157	0/0:20,0:20:37.01:0,37,239	0/0:6,0:6:11.60:0,12,76	0/0:9,0:9:23.35:0,23,178	0/0:12,0:12:28.79:0,29,187	0/0:8,0:8:20.36:0,20,144	0/0:10,0:10:19.53:0,20,111	0/0:11,0:10:15.11:0,15,110	0/0:11,0:11:25.65:0,26,163	0/0:7,0:5:8.92:0,9,65
chr10	25827381	.	A	ATC	21324.12	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=1.464;DP=472;FS=0.000;HRun=0;HaplotypeScore=80.3425;InbreedingCoeff=0.9904;MQ=80.22;MQ0=0;MQRankSum=-6.717;QD=50.29;ReadPosRankSum=2.961;VQSLOD=5.5308;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,16:16:45.15:868,45,0	1/1:1,12:13:39.13:753,39,0	0/0:17,0:17:41.04:0,41,656	0/0:13,0:13:36.04:0,36,479	1/1:1,33:34:81.28:1564,81,0	1/1:0,19:19:51.17:982,51,0	1/1:0,20:21:54.19:1036,54,0	1/1:0,25:25:75.15:1276,75,0	1/1:2,15:17:39.13:751,39,0	1/1:0,20:20:60.21:1159,60,0	1/1:2,20:22:60.21:1159,60,0	1/1:0,11:11:27.09:520,27,0	1/1:0,17:17:42.14:808,42,0	1/1:0,6:6:18.06:346,18,0	0/0:18,0:18:51.17:0,51,781	1/1:0,10:10:30.10:579,30,0	1/1:0,15:16:36.12:691,36,0	1/1:0,13:13:39.13:750,39,0	1/1:2,16:19:54.17:981,54,0	1/1:4,18:23:48.16:903,48,0	1/1:0,16:16:45.15:869,45,0	1/1:1,7:8:15.05:290,15,0	1/1:1,15:17:42.14:811,42,0	1/1:0,15:15:42.14:809,42,0	1/1:0,13:13:36.12:694,36,0	1/1:3,17:20:57.14:1058,57,0	1/1:3,21:24:60.18:1150,60,0	1/1:0,9:9:27.09:520,27,0
chr10	25827466	.	T	TG	2128.87	PASS	AB=0.837;AC=36;AF=0.643;AN=56;BaseQRankSum=4.516;DP=443;FS=0.916;HRun=0;HaplotypeScore=132.0734;InbreedingCoeff=0.3045;MQ=57.48;MQ0=10;MQRankSum=-4.503;QD=6.98;ReadPosRankSum=4.696;VQSLOD=3.7387;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:20,12:32:34.24:221,34,0	1/1:3,5:8:12.21:90,12,0	0/0:50,0:10:24.20:0,24,121	0/0:39,0:15:16.54:0,17,170	1/1:18,3:21:15.77:178,16,0	0/1:5,3:8:13.06:40,0,13	1/1:13,5:18:18.14:210,18,0	0/0:27,0:25:64.79:0,65,551	1/1:6,4:10:4.14:82,4,0	1/1:12,4:16:17.91:150,18,0	1/1:19,8:26:36.29:255,36,0	1/1:2,2:4:4.83:35,5,0	0/1:12,2:14:21.44:59,0,21	1/1:5,5:10:17.98:93,18,0	0/0:13,0:13:17.76:0,18,139	1/1:3,3:5:0.46:26,0,0	0/0:8,0:8:20.41:0,20,149	1/1:2,1:3:8.14:46,8,0	0/1:9,0:10:7.33:66,0,7	0/1:18,5:24:13.78:174,0,14	0/1:4,0:4:2.35:11,0,2	1/1:3,3:6:1.95:56,2,0	0/1:12,3:15:6.45:74,0,6	0/1:4,2:6:5.58:43,0,6	0/1:15,5:20:1.01:117,0,1	1/1:15,3:18:1.31:116,1,0	1/1:18,6:23:14.74:161,15,0	0/0:1,0:1:2.98:0,3,21
chr10	25827467	.	T	TTTTGTTTTG	18963.81	PASS	AB=0.917;AC=45;AF=0.804;AN=56;BaseQRankSum=0.047;DP=449;FS=7.064;HRun=0;HaplotypeScore=164.7423;InbreedingCoeff=0.5329;MQ=57.34;MQ0=10;MQRankSum=-5.288;QD=48.88;ReadPosRankSum=7.739;VQSLOD=3.3541;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:32,0:32:33.88:842,34,0	1/1:3,5:8:10.76:562,11,0	0/1:49,0:10:3.95:4,0,144	0/0:39,0:15:15.35:0,15,172	1/1:17,3:20:20.82:1166,21,0	1/1:5,3:8:17.83:654,18,0	1/1:14,4:18:35.72:1275,36,0	0/1:26,0:24:99:284,0,157	1/1:5,3:10:26.86:836,27,0	1/1:12,4:16:3.66:1015,4,0	1/1:23,6:27:57.46:1914,57,0	1/1:2,2:4:12.04:439,12,0	1/1:12,2:14:22.61:819,23,0	1/1:5,5:10:23.86:876,24,0	0/0:13,0:13:12.78:0,13,191	1/1:1,3:10:12.03:451,12,0	0/0:8,0:8:7.95:0,8,72	1/1:3,1:4:5.80:116,6,0	1/1:10,0:10:12.94:410,13,0	1/1:19,5:25:47.31:1589,47,0	1/1:4,0:4:4.49:141,4,0	1/1:3,3:6:12.62:455,13,0	1/1:13,3:16:22.91:747,23,0	0/1:4,2:6:16.62:217,0,17	1/1:15,5:20:31.02:1512,31,0	1/1:13,3:18:24.12:1011,24,0	1/1:16,6:23:62.68:1629,63,0	0/0:1,0:1:2.98:0,3,21
chr10	25827471	.	T	TTGTTTG	6607.15	PASS	AB=1.000;AC=28;AF=0.500;AN=56;BaseQRankSum=9.457;DP=431;FS=2.872;HRun=0;HaplotypeScore=161.7669;InbreedingCoeff=-0.0742;MQ=55.16;MQ0=9;MQRankSum=-4.000;QD=21.81;ReadPosRankSum=7.487;VQSLOD=4.1572;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:22,12:34:60.48:1151,60,0	0/1:7,0:7:4.13:223,0,4	0/0:41,0:8:8.65:0,9,113	0/0:37,0:13:23.90:0,24,225	1/1:19,0:19:12.79:374,13,0	0/1:7,0:7:25.97:132,0,26	1/1:16,0:16:14.81:447,15,0	0/0:24,0:22:22.15:0,22,332	0/1:11,0:11:23.72:262,0,24	1/1:14,0:14:0.81:265,1,0	0/1:30,0:28:17.09:698,0,17	1/1:4,0:4:6.85:146,7,0	0/1:13,0:13:10.20:214,0,10	1/1:9,0:9:19.58:329,20,0	0/0:13,0:13:12.70:0,13,214	1/1:10,0:9:11.97:195,12,0	0/0:7,0:7:14.45:0,14,158	0/1:4,0:4:35.95:36,0,43	0/1:9,0:9:38.93:39,0,65	0/1:25,0:25:67.76:486,0,68	0/0:4,0:4:3.58:0,4,10	0/1:6,0:6:6.33:176,0,6	0/1:16,0:16:42.12:200,0,42	0/1:7,0:7:35.88:89,0,36	0/1:20,0:20:92.79:350,0,93	0/1:17,0:17:76.64:221,0,77	0/1:25,0:24:32.14:573,0,32	0/0:1,0:1:3.01:0,3,43
chr10	25827561	.	G	GCCCCCCC	4818.38	PASS	AB=0.693;AC=27;AF=0.482;AN=56;BaseQRankSum=7.685;DP=344;FS=33.368;HRun=6;HaplotypeScore=163.4633;InbreedingCoeff=-0.0599;MQ=74.69;MQ0=0;MQRankSum=-7.819;QD=21.51;ReadPosRankSum=2.812;VQSLOD=0.0908;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,111,2391	0/1:2,0:5:9.12:278,0,9	0/0:6,0:6:12.03:0,12,216	0/0:14,0:14:33.06:0,33,687	0/1:8,0:20:99:390,0,117	1/1:6,3:13:12.04:305,12,0	0/1:5,0:14:92.42:117,0,92	0/0:17,0:19:42.12:0,42,929	0/1:11,0:13:2.89:334,0,3	0/1:2,0:10:25.41:188,0,25	0/1:9,0:14:11.31:11,0,83	0/1:4,0:5:9.27:63,0,9	0/1:3,0:6:45.62:65,0,46	0/1:3,0:7:31.43:65,0,31	0/0:9,0:9:24.08:0,24,531	1/1:7,0:6:15.04:281,15,0	0/0:20,0:20:54.16:0,54,1151	0/1:5,0:6:7.53:216,0,8	0/1:6,0:10:30.19:153,0,30	0/1:5,0:14:19.68:565,0,20	0/0:1,0:5:5.70:0,6,39	1/1:3,0:8:6.02:138,6,0	1/1:4,0:12:14.96:377,15,0	0/1:6,0:9:9.99:138,0,10	1/1:4,0:10:21.04:398,21,0	0/1:5,1:18:58.52:399,0,59	0/1:9,0:13:47.33:124,0,47	1/1:2,0:9:9.03:211,9,0
chr10	25827890	.	AAT	A	4059.46	PASS	AC=42;AF=0.808;AN=52;BaseQRankSum=3.347;DP=205;FS=4.536;HRun=0;HaplotypeScore=42.1104;InbreedingCoeff=0.7035;MQ=64.83;MQ0=0;MQRankSum=-5.415;QD=33.00;ReadPosRankSum=2.852;VQSLOD=5.2749;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:27.03:0,27,383	1/1:0,1:1:3.01:40,3,0	./.	0/0:5,0:4:5.96:0,6,44	1/1:2,6:8:15.05:195,15,0	1/1:3,10:13:39.09:503,39,0	1/1:0,1:1:3.01:40,3,0	0/0:37,0:37:93.29:0,93,1533	1/1:2,1:3:9:89,9,0	1/1:0,6:6:18.04:224,18,0	1/1:1,5:6:15.05:201,15,0	1/1:1,5:6:12.04:161,12,0	1/1:0,5:5:15.05:197,15,0	1/1:3,0:3:2.97:20,3,0	0/0:3,0:3:9.03:0,9,152	1/1:0,3:3:9.03:121,9,0	0/0:24,0:24:69.21:0,69,1161	1/1:2,8:10:24.08:322,24,0	1/1:4,11:15:45.12:564,45,0	1/1:0,5:5:15.05:201,15,0	1/1:1,3:4:0.35:109,0,0	./.	1/1:3,1:4:3.01:40,3,0	1/1:1,3:4:12.04:161,12,0	1/1:2,3:5:9.03:121,9,0	1/1:0,6:6:18.06:242,18,0	1/1:2,7:9:21.07:282,21,0	1/1:1,5:6:18.04:225,18,0
chr10	25827915	.	A	AATATAT	6303.08	PASS	AB=0.536;AC=41;AF=0.788;AN=52;BaseQRankSum=-5.456;DP=192;FS=3.998;HRun=0;HaplotypeScore=57.4556;InbreedingCoeff=0.5110;MQ=56.40;MQ0=0;MQRankSum=-7.278;QD=41.47;ReadPosRankSum=1.146;VQSLOD=3.8809;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:36.11:0,36,703	1/1:0,3:3:9.03:306,9,0	0/0:1,0:1:2.84:0,3,14	0/0:3,0:2:3.01:0,3,63	1/1:2,1:3:6.02:192,6,0	1/1:2,7:9:27.08:809,27,0	./.	0/1:6,0:45:0.21:107,0,0	1/1:1,1:2:6.02:148,6,0	1/1:3,3:6:12.04:383,12,0	1/1:6,1:7:3.01:102,3,0	./.	1/1:1,4:6:12.04:408,12,0	1/1:0,2:3:6.02:204,6,0	0/0:3,0:3:6.02:0,6,133	1/1:3,1:6:9.03:307,9,0	0/0:3,0:18:6.60:0,7,17	1/1:6,2:8:6.02:205,6,0	1/1:7,6:13:24.08:770,24,0	1/1:1,4:5:9.03:307,9,0	1/1:1,3:4:9.03:251,9,0	1/1:1,0:1:3.01:68,3,0	1/1:2,1:3:6.02:198,6,0	1/1:2,0:3:3.01:70,3,0	1/1:4,1:5:3.01:102,3,0	1/1:0,3:3:9.03:307,9,0	1/1:4,5:10:21.07:679,21,0	1/1:4,3:7:12.04:381,12,0
chr10	25828271	.	TTGTGTGTG	T	3791.77	PASS	AB=0.889;AC=38;AF=0.826;AN=46;BaseQRankSum=1.020;DP=590;FS=7.817;HRun=0;HaplotypeScore=155.4583;InbreedingCoeff=0.1036;MQ=57.59;MQ0=21;MQRankSum=-2.742;QD=9.09;ReadPosRankSum=0.899;VQSLOD=2.2753;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:37,0:38:0.84:1,0,167	1/1:5,1:6:3.01:74,3,0	./.	./.	1/1:16,0:16:2.99:25,3,0	1/1:16,3:21:15.05:320,15,0	1/1:9,1:9:3.01:74,3,0	0/0:21,0:20:1.82:0,2,5	0/1:24,1:25:60.18:81,0,60	1/1:20,2:22:8.98:259,9,0	1/1:13,0:11:2.99:25,3,0	./.	1/1:21,7:28:18.06:446,18,0	1/1:17,3:20:9.03:222,9,0	1/1:10,0:15:12.04:223,12,0	1/1:16,3:24:17.20:389,17,0	0/1:16,6:22:99:208,0,138	./.	0/0:19,0:17:2.04:0,2,6	1/1:11,0:11:3.01:51,3,0	./.	1/1:19,3:23:9.03:223,9,0	1/1:20,7:28:6.21:95,6,0	1/1:17,7:24:12.04:297,12,0	1/1:8,0:9:3.01:56,3,0	1/1:23,4:27:15.04:285,15,0	1/1:15,3:19:12.04:297,12,0	0/1:10,2:10:62.85:140,0,63
chr10	25829113	.	CTT	C	524.94	PASS	AB=0.881;AC=5;AF=0.093;AN=54;BaseQRankSum=-0.132;DP=452;FS=0.944;HRun=2;HaplotypeScore=90.3116;InbreedingCoeff=0.2881;MQ=29.84;MQ0=112;MQRankSum=-1.333;QD=6.48;ReadPosRankSum=2.403;VQSLOD=0.3419;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:12,4:10:99:164,0,116	0/0:9,0:8:12.04:0,12,183	./.	0/0:2,0:1:2.50:0,2,9	0/0:25,0:18:36.12:0,36,508	0/0:17,0:13:21.07:0,21,287	0/0:16,0:8:14.98:0,15,173	1/1:22,8:8:24.05:320,24,0	0/0:15,0:13:27.09:0,27,384	0/0:17,0:13:37:0,37,522	0/0:22,0:15:39.01:0,39,487	0/0:11,0:9:18.03:0,18,238	0/0:20,0:16:36.08:0,36,477	0/0:18,0:15:33:0,33,411	0/0:13,0:9:9.03:0,9,134	0/0:19,0:13:30.10:0,30,430	0/1:13,3:10:95.30:152,0,95	0/0:11,0:7:16.68:0,17,232	0/0:11,0:7:21.03:0,21,254	0/0:18,0:10:27.09:0,27,395	0/0:5,0:3:3.48:0,3,41	0/0:16,0:12:17.96:0,18,200	0/0:18,0:11:15.03:0,15,201	0/0:31,0:21:20.93:0,21,251	0/0:21,0:19:50.19:0,50,622	0/0:15,0:12:35.79:0,36,476	0/0:20,0:18:38.80:0,39,599	0/1:19,0:15:5.42:5,0,469
chr10	25829130	.	CCCT	C	1550.92	PASS	AB=1.000;AC=39;AF=0.750;AN=52;BaseQRankSum=6.766;DP=380;FS=4.815;HRun=0;HaplotypeScore=95.1785;InbreedingCoeff=0.2762;MQ=30.76;MQ0=57;MQRankSum=-1.167;QD=4.79;ReadPosRankSum=0.928;VQSLOD=1.7395;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:5,5:7:18.06:243,18,0	./.	./.	0/0:8,0:1:1.82:0,2,5	1/1:19,0:16:8.75:57,9,0	1/1:15,0:15:7.13:39,7,0	1/1:17,0:12:8.87:58,9,0	0/0:16,0:13:13.25:0,13,197	0/1:15,0:12:12.81:78,0,13	0/1:11,0:9:6.87:64,0,7	1/1:12,0:11:14.76:96,15,0	1/1:11,0:8:14.41:86,14,0	0/1:15,0:14:13.15:93,0,13	1/1:13,0:11:17.72:114,18,0	1/1:4,9:10:6.02:86,6,0	1/1:22,0:18:7.96:136,8,0	0/0:13,0:7:10.39:0,10,187	1/1:7,0:4:2.89:21,3,0	1/1:11,0:10:2.42:18,2,0	1/1:11,0:8:3.92:36,4,0	0/0:4,0:4:1.55:0,2,4	1/1:15,0:11:5.91:39,6,0	1/1:13,0:11:4.41:22,4,0	1/1:26,0:19:14.13:81,14,0	1/1:22,0:20:20.09:149,20,0	0/1:16,0:14:21.63:43,0,22	1/1:16,0:15:20.70:135,21,0	0/1:14,0:10:0.99:1,0,46
chr10	25829144	.	CTCCTCCTCT	C	7732.60	PASS	AB=0.731;AC=41;AF=0.732;AN=56;BaseQRankSum=-0.243;DP=414;FS=2.675;HRun=0;HaplotypeScore=103.3704;InbreedingCoeff=0.4317;MQ=37.44;MQ0=40;MQRankSum=-1.628;QD=22.74;ReadPosRankSum=3.485;VQSLOD=3.7429;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:8,0:7:6.62:7,0,30	1/1:2,7:8:0.47:1,0,0	0/0:15,0:3:2.45:0,2,111	0/0:20,0:3:6.72:0,7,40	1/1:5,14:18:14.87:318,15,0	1/1:1,14:15:9.03:245,9,0	1/1:7,10:13:9.03:264,9,0	0/0:14,0:12:12.45:0,12,232	1/1:4,17:18:1.10:488,1,0	1/1:5,8:11:21.50:438,22,0	1/1:3,8:10:17.88:456,18,0	1/1:3,14:14:15.05:429,15,0	0/1:4,13:16:2.52:501,0,3	1/1:3,14:15:18.06:527,18,0	0/0:16,0:14:21.04:0,21,319	0/1:2,19:20:47.07:678,0,47	0/0:9,0:7:7.51:0,8,200	0/1:6,0:4:12.26:41,0,12	1/1:5,6:8:17.96:209,18,0	1/1:5,10:13:17.98:305,18,0	1/1:9,0:8:6.01:60,6,0	0/1:4,14:14:7.48:168,0,7	1/1:3,9:10:9.03:192,9,0	1/1:10,14:20:14.69:366,15,0	1/1:3,18:19:33.45:793,33,0	1/1:1,11:12:32.93:505,33,0	1/1:1,13:14:20.12:616,20,0	1/1:13,0:9:17.30:125,17,0
chr10	25829390	.	C	CTT	14364.53	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-5.226;DP=511;FS=11.439;HRun=0;HaplotypeScore=93.9724;InbreedingCoeff=0.9787;MQ=76.24;MQ0=0;MQRankSum=-5.977;QD=36.83;ReadPosRankSum=6.360;VQSLOD=6.6243;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:67.08:0,67,465	1/1:1,4:5:8.08:150,8,0	0/0:17,0:17:32.56:0,33,698	0/0:10,0:9:24.54:0,25,362	1/1:0,25:27:68.91:1006,69,0	1/1:6,15:23:50.48:740,50,0	1/1:0,13:13:36.12:580,36,0	0/0:33,0:33:72.27:0,72,447	1/1:2,13:15:27.09:428,27,0	1/1:1,20:21:59.22:914,59,0	1/1:5,18:24:57.46:873,57,0	1/1:5,9:14:28.57:454,29,0	1/1:0,16:17:39.13:620,39,0	1/1:2,15:18:34.24:567,34,0	0/0:16,0:16:48.16:0,48,772	1/1:2,14:16:35.60:579,36,0	0/0:20,0:20:56.99:0,57,411	1/1:1,12:13:35.64:576,36,0	1/1:4,12:16:37.07:590,37,0	1/1:1,23:27:66.10:972,66,0	1/1:1,11:12:33.06:501,33,0	1/1:2,15:17:44.11:692,44,0	1/1:4,18:22:56.04:860,56,0	1/1:4,16:20:34.06:532,34,0	1/1:0,13:14:39.13:621,39,0	1/1:3,17:23:63.16:916,63,0	1/1:1,25:26:63.21:1000,63,0	1/1:0,4:4:12.04:193,12,0
chr10	25829563	.	A	AT	217.98	PASS	AC=2;AF=0.037;AN=54;BaseQRankSum=-2.701;DP=457;FS=1.148;HRun=8;HaplotypeScore=128.8475;InbreedingCoeff=0.9842;MQ=88.31;MQ0=0;MQRankSum=0.073;QD=18.16;ReadPosRankSum=-1.310;VQSLOD=2.1270;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:57.02:0,57,522	0/0:9,0:9:27.01:0,27,247	0/0:23,0:23:36.91:0,37,346	0/0:16,0:15:21.88:0,22,198	0/0:19,0:19:57.03:0,57,521	0/0:20,0:20:30.04:0,30,384	0/0:15,0:15:36.01:0,36,329	0/0:33,0:33:81.04:0,81,741	0/0:15,0:15:45.02:0,45,412	0/0:25,0:25:75.04:0,75,686	0/0:16,0:16:36.48:0,36,330	0/0:7,0:7:21.01:0,21,192	0/0:15,0:15:41.99:0,42,377	0/0:9,0:9:21.01:0,21,192	1/1:2,10:12:27.08:312,27,0	0/0:12,0:12:36.02:0,36,329	0/0:16,0:16:42.02:0,42,384	0/0:13,0:13:36.02:0,36,329	0/0:25,0:24:63.03:0,63,577	0/0:16,0:16:35.99:0,36,325	0/0:22,0:22:51.02:0,51,467	0/0:14,0:14:33.01:0,33,302	0/0:13,0:13:30.44:0,30,267	0/0:18,0:17:32.54:0,33,302	0/0:15,0:15:39.49:0,39,358	0/0:17,0:17:42.01:0,42,384	0/0:18,0:18:48.02:0,48,439	./.
chr10	25829595	.	T	TTCTCTC	1749.76	PASS	AB=0.952;AC=39;AF=0.848;AN=46;BaseQRankSum=0.988;DP=525;FS=17.411;HRun=0;HaplotypeScore=183.8998;InbreedingCoeff=0.2363;MQ=71.36;MQ0=8;MQRankSum=-1.103;QD=4.43;ReadPosRankSum=-2.248;VQSLOD=1.3148;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:21:0.47:0,0,1	1/1:12,0:13:3.01:71,3,0	./.	./.	1/1:28,0:28:3.01:70,3,0	1/1:19,0:19:9.03:153,9,0	1/1:17,0:19:6.04:123,6,0	1/1:34,0:32:4.06:11,4,0	0/1:19,0:20:47.58:147,0,48	1/1:23,0:22:6.01:91,6,0	1/1:14,0:16:6.01:121,6,0	./.	0/0:17,0:17:9.57:0,10,99	1/1:12,0:13:6.22:23,6,0	0/0:8,0:8:3.01:0,3,41	1/1:15,1:18:3.01:78,3,0	1/1:20,0:20:2.13:5,2,0	1/1:16,0:16:4.56:33,5,0	1/1:21,0:21:3.01:55,3,0	1/1:12,0:12:3.01:71,3,0	1/1:21,0:23:3.01:78,3,0	./.	1/1:24,0:24:8.56:124,9,0	1/1:21,0:20:3.50:24,3,0	./.	1/1:26,0:26:16.99:234,17,0	1/1:23,0:23:15.03:290,15,0	1/1:3,0:2:5.99:61,6,0
chr10	25829641	.	C	CTT	5016.43	PASS	AB=0.896;AC=36;AF=0.643;AN=56;BaseQRankSum=-4.558;DP=493;FS=5.189;HRun=1;HaplotypeScore=83.1313;InbreedingCoeff=0.3191;MQ=63.32;MQ0=13;MQRankSum=-0.019;QD=13.93;ReadPosRankSum=1.874;VQSLOD=2.1484;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:28.04:0,28,211	0/1:8,0:8:9.91:109,0,10	0/0:27,0:15:35.36:0,35,332	0/0:40,0:13:28.35:0,28,293	1/1:22,0:21:56.84:482,57,0	0/1:9,16:24:10.99:148,0,11	1/1:20,0:20:18.56:310,19,0	0/0:21,0:20:53.36:0,53,391	1/1:18,0:16:0.65:173,1,0	1/1:23,0:23:26.74:479,27,0	1/1:15,1:16:38.98:375,39,0	0/1:6,0:6:9.92:84,0,10	0/1:4,15:19:38.57:81,0,39	1/1:14,1:15:9.42:270,9,0	0/0:9,0:9:23.97:0,24,199	0/1:18,0:18:26.85:189,0,27	0/0:18,0:17:13.63:0,14,91	1/1:3,0:9:4.82:42,5,0	1/1:11,0:15:36.02:360,36,0	1/1:13,0:12:30.20:250,30,0	1/1:14,0:14:26.91:229,27,0	0/1:17,0:17:40.68:223,0,41	1/1:18,0:18:5.92:220,6,0	1/1:4,0:23:4.17:40,4,0	1/1:7,0:7:14.98:132,15,0	0/1:21,0:21:33.54:292,0,34	0/1:27,0:26:0.49:437,0,0	1/1:6,0:4:4.92:90,5,0
chr10	25829647	.	CAA	C	683.85	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-2.962;DP=428;FS=16.593;HRun=2;HaplotypeScore=77.0033;InbreedingCoeff=0.7232;MQ=69.15;MQ0=9;MQRankSum=2.015;QD=22.06;ReadPosRankSum=-1.394;VQSLOD=0.2924;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:33.07:0,33,509	0/0:6,0:6:15.05:0,15,235	0/0:29,0:17:29.11:0,29,626	0/0:40,0:13:37.27:0,37,516	0/0:25,0:24:68.90:0,69,1066	0/0:18,0:17:15.05:0,15,269	0/0:16,0:16:34.67:0,35,586	1/1:1,18:18:54.18:746,54,0	0/0:11,0:11:24.82:0,25,404	0/0:20,0:22:60.10:0,60,1059	0/0:13,0:13:39.13:0,39,662	0/0:6,0:6:18.06:0,18,293	0/0:17,0:17:12.04:0,12,220	0/0:14,0:14:38.58:0,39,627	0/0:8,0:8:22.32:0,22,348	0/0:12,0:12:30.10:0,30,461	1/1:2,10:11:5.96:49,6,0	0/0:4,0:4:6.02:0,6,100	0/0:15,0:15:42.14:0,42,772	0/0:12,0:12:32.68:0,33,542	0/0:12,0:12:30.10:0,30,471	0/0:13,0:13:39.12:0,39,633	0/0:15,0:15:37.26:0,37,562	0/0:22,0:22:6.49:0,6,109	0/0:6,0:6:18.06:0,18,303	0/0:18,0:19:42.12:0,42,867	0/0:24,0:22:68.95:0,69,1026	0/0:4,0:5:0.56:0,1,185
chr10	25830646	.	CAA	C	1930.17	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=0.399;DP=523;FS=3.893;HRun=10;HaplotypeScore=101.5014;InbreedingCoeff=0.9924;MQ=78.68;MQ0=2;MQRankSum=-2.977;QD=24.75;ReadPosRankSum=-1.535;VQSLOD=3.2347;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,20:23:55.98:610,56,0	0/0:14,0:14:39.12:0,39,598	0/0:34,0:26:38.65:0,39,548	0/0:30,0:24:40.47:0,40,423	0/0:23,0:23:63.21:0,63,993	0/0:15,0:15:42.10:0,42,610	0/0:12,0:12:36.12:0,36,562	1/1:4,28:33:83.91:895,84,0	0/0:18,0:18:51.17:0,51,788	0/0:26,0:29:79.73:0,80,1169	0/0:23,0:24:69.23:0,69,1068	0/0:9,0:9:21.06:0,21,312	0/0:17,0:17:48.16:0,48,757	0/0:15,0:15:39.12:0,39,596	0/0:2,0:13:27.45:0,27,94	0/0:11,0:11:27.09:0,27,429	1/1:0,22:21:51.14:568,51,0	0/0:14,0:14:36.09:0,36,544	0/0:14,0:13:33.11:0,33,506	0/0:19,0:20:50.62:0,51,739	0/0:11,0:10:27.56:0,28,430	0/0:6,0:7:20.55:0,21,273	0/0:16,0:18:45.15:0,45,695	0/0:7,0:8:17.55:0,18,246	0/0:18,0:19:44.51:0,45,675	0/0:21,0:21:45.15:0,45,709	0/0:31,0:32:92.79:0,93,1401	0/0:15,0:16:41.63:0,42,607
chr10	25831936	.	ATGG	A	21117.74	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=11.934;DP=612;FS=2.672;HRun=0;HaplotypeScore=129.6359;InbreedingCoeff=0.9626;MQ=73.55;MQ0=0;MQRankSum=-2.466;QD=44.27;ReadPosRankSum=6.444;VQSLOD=5.9012;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,104,2337	1/1:0,8:8:21.07:358,21,0	0/0:12,0:12:3.12:0,3,556	0/0:12,0:12:30.08:0,30,598	1/1:1,17:18:42.14:699,42,0	1/1:1,23:24:69.24:1177,69,0	1/1:3,27:30:72.25:1227,72,0	0/0:39,0:39:99:0,114,2546	1/1:1,31:32:90.31:1535,90,0	1/1:0,20:20:60.21:1018,60,0	1/1:2,18:20:51.17:869,51,0	1/1:0,22:22:54.18:921,54,0	1/1:1,25:26:63.22:1074,63,0	1/1:0,24:24:66.23:1125,66,0	0/0:23,0:23:69.24:0,69,1558	1/1:0,26:26:72.25:1228,72,0	0/0:13,0:13:39.13:0,39,893	1/1:0,13:13:36.12:614,36,0	1/1:1,17:18:51.16:827,51,0	1/1:1,23:24:63.21:1059,63,0	1/1:2,28:30:69.24:1162,69,0	1/1:2,16:18:45.15:765,45,0	1/1:0,14:14:32.85:562,33,0	1/1:3,27:30:69.71:1177,70,0	1/1:0,21:21:57.20:972,57,0	1/1:1,20:21:60.20:1013,60,0	1/1:0,31:31:81.28:1380,81,0	1/1:0,7:7:21.07:358,21,0
chr10	25832200	.	A	AT	2559.21	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-8.103;DP=449;FS=14.257;HRun=5;HaplotypeScore=54.9963;InbreedingCoeff=0.9297;MQ=72.87;MQ0=1;MQRankSum=-1.406;QD=32.81;ReadPosRankSum=-2.398;VQSLOD=1.9227;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,20:25:72.05:902,72,0	0/0:11,0:11:27.07:0,27,290	0/0:9,0:8:11.28:0,11,151	0/0:24,0:16:5.79:0,6,77	0/0:23,0:23:63.11:0,63,647	0/0:14,0:14:39.10:0,39,419	0/0:14,0:14:39.07:0,39,403	1/1:4,30:34:87.27:1130,87,0	0/0:5,0:5:12.03:0,12,129	0/0:15,0:15:36.07:0,36,376	0/0:30,0:30:90.20:0,90,952	0/0:12,0:12:36.08:0,36,379	0/0:15,0:15:33.08:0,33,355	0/0:15,0:15:39.08:0,39,408	0/0:5,0:5:15.04:0,15,160	0/0:17,0:17:39.10:0,39,419	1/1:1,18:19:51.17:670,51,0	0/0:14,0:13:39.10:0,39,419	0/0:20,0:20:48.10:0,48,509	0/0:19,0:19:51.13:0,51,548	0/0:7,0:7:21.05:0,21,226	0/0:8,0:8:21.05:0,21,220	0/0:14,0:14:39.10:0,39,419	0/0:10,0:10:21.05:0,21,226	0/0:21,0:21:57.14:0,57,613	0/0:18,0:18:45.11:0,45,484	0/0:21,0:20:57.14:0,57,612	0/0:9,0:9:24.06:0,24,258
chr10	25832318	.	AT	A	842.20	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.917;DP=409;FS=0.000;HRun=1;HaplotypeScore=68.4273;InbreedingCoeff=0.8838;MQ=83.04;MQ0=2;MQRankSum=-2.665;QD=32.39;ReadPosRankSum=-0.911;VQSLOD=3.0113;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,26:26:72.07:937,72,0	0/0:3,0:3:6.02:0,6,96	0/0:21,0:20:48.16:0,48,752	0/0:22,0:15:42.09:0,42,617	0/0:10,0:10:27.09:0,27,432	0/0:9,0:9:27.09:0,27,432	0/0:19,0:19:54.17:0,54,837	0/0:37,0:37:99:0,111,1742	0/0:10,0:10:27.09:0,27,428	0/0:12,0:12:36.12:0,36,552	0/0:17,0:17:48.16:0,48,767	0/0:11,0:11:33.11:0,33,525	0/0:12,0:12:36.10:0,36,551	0/0:11,0:11:33.11:0,33,527	0/0:14,0:14:39.12:0,39,597	0/0:9,0:9:27.09:0,27,428	0/0:13,0:13:32.98:0,33,526	0/0:13,0:13:39.13:0,39,623	0/0:22,0:22:66.21:0,66,1023	0/0:13,0:13:36.12:0,36,576	0/0:16,0:16:30.03:0,30,473	0/0:6,0:6:18.06:0,18,288	0/0:8,0:8:17.85:0,18,284	0/0:7,0:7:21.07:0,21,336	0/0:17,0:17:48.16:0,48,767	0/0:19,0:19:48.16:0,48,764	0/0:19,0:18:54.15:0,54,807	0/0:11,0:11:33.11:0,33,528
chr10	25832937	.	AACACACACACAC	A	915.87	PASS	AB=0.966;AC=27;AF=0.711;AN=38;BaseQRankSum=2.066;DP=531;FS=4.435;HRun=0;HaplotypeScore=168.7207;InbreedingCoeff=0.2538;MQ=66.69;MQ0=17;MQRankSum=-1.291;QD=3.38;ReadPosRankSum=1.076;VQSLOD=2.3221;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:9.03:0,9,335	1/1:6,2:8:3.01:101,3,0	./.	./.	./.	0/0:19,0:19:0:0,0,0	0/0:19,0:19:2.99:0,3,24	0/0:31,0:30:0:0,0,0	1/1:21,3:25:5.97:145,6,0	./.	1/1:11,1:12:3.01:101,3,0	./.	./.	1/1:17,4:21:3:101,3,0	1/1:14,0:13:1.99:40,2,0	1/1:18,4:22:6.02:202,6,0	0/1:27,0:27:25.93:26,0,76	0/0:12,0:12:4.26:0,4,84	1/1:10,0:11:3.01:44,3,0	1/1:14,0:14:3.01:47,3,0	1/1:56,0:55:2.67:11,3,0	./.	./.	./.	1/1:9,2:9:3.01:101,3,0	1/1:14,0:13:0.71:1,1,0	1/1:20,0:17:3:36,3,0	1/1:15,0:14:5.93:66,6,0
chr10	25833476	.	TTGTGTGTGTGTGTGTGTGTGTGTGTGTG	T	1002.04	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.439;DP=648;FS=0.000;HRun=0;HaplotypeScore=391.7358;InbreedingCoeff=0.8772;MQ=62.33;MQ0=17;MQRankSum=-4.056;QD=34.55;ReadPosRankSum=0.405;VQSLOD=0.9879;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:38.10:0,38,3109	0/0:7,0:7:12.04:0,12,1124	0/0:23,0:16:17.38:0,17,215	0/0:24,0:13:18.03:0,18,225	0/0:23,0:25:33.06:0,33,1891	0/0:29,0:28:48.14:0,48,3605	0/0:26,0:26:48.16:0,48,2657	0/0:24,0:24:39.12:0,39,1365	0/0:24,0:24:47.12:0,47,3217	0/0:33,0:32:78.25:0,78,4687	0/0:17,0:17:36.12:0,36,1918	0/0:25,0:24:52.75:0,53,3314	0/0:12,0:12:18.03:0,18,1055	0/0:21,0:21:45.15:0,45,4143	1/1:7,22:29:16.87:1092,17,0	0/0:17,0:16:36.11:0,36,2747	0/0:31,0:31:61.74:0,62,3102	0/0:24,0:23:30.57:0,31,1586	0/0:22,0:21:32.96:0,33,1060	0/0:35,0:35:42.13:0,42,2773	0/0:32,0:29:49.04:0,49,2797	0/0:15,0:14:27.08:0,27,1425	0/0:19,0:18:30.09:0,30,1759	0/0:31,0:31:18.04:0,18,1046	0/0:20,0:20:42.62:0,43,3190	0/0:20,0:20:48.14:0,48,2616	0/0:22,0:22:27.54:0,28,1920	0/0:9,0:7:9.03:0,9,642
chr10	25833518	.	GTGTGTA	G	4076.66	PASS	AB=0.976;AC=33;AF=0.589;AN=56;BaseQRankSum=2.364;DP=599;FS=31.925;HRun=0;HaplotypeScore=145.4004;InbreedingCoeff=-0.3728;MQ=55.99;MQ0=16;MQRankSum=1.899;QD=7.45;ReadPosRankSum=5.713;VQSLOD=1.0510;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:25:99:113,0,200	0/1:9,0:9:39.75:133,0,40	0/0:26,0:17:38.55:0,39,410	0/0:26,0:17:44.11:0,44,457	0/1:27,0:27:12.74:315,0,13	0/1:27,0:27:82.75:182,0,83	0/1:8,12:20:54.04:54,0,134	0/1:18,0:17:14.41:141,0,14	0/1:24,0:24:99:183,0,108	1/1:34,0:33:59.18:555,59,0	0/1:13,0:13:64.68:122,0,65	1/1:23,0:22:39.07:277,39,0	0/1:17,0:17:14.07:214,0,14	0/1:19,0:19:75.35:75,0,224	0/1:27,0:27:63.96:99,0,64	0/1:24,1:24:99:103,0,108	1/1:28,0:28:21.32:263,21,0	0/1:18,0:17:5.30:5,0,39	0/1:6,0:5:2.30:31,0,2	0/1:28,0:28:65.62:90,0,66	0/1:30,0:26:23.55:215,0,24	1/1:12,0:11:16.43:142,16,0	0/1:19,0:18:5.83:6,0,24	1/1:27,0:27:2.37:8,2,0	1/1:22,3:25:9.80:378,10,0	0/1:18,0:18:18.32:250,0,18	0/1:23,1:23:26.23:115,0,26	1/1:3,0:2:1.79:7,2,0
chr10	25833520	.	GTGTA	G	6094.10	PASS	AB=1.000;AC=50;AF=0.893;AN=56;BaseQRankSum=2.209;DP=585;FS=0.000;HRun=0;HaplotypeScore=122.8362;InbreedingCoeff=0.4540;MQ=56.67;MQ0=15;MQRankSum=0.402;QD=11.46;ReadPosRankSum=3.399;VQSLOD=4.0861;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:24:61:222,0,61	1/1:9,0:9:15.83:119,16,0	0/0:27,0:18:41.09:0,41,449	0/0:26,0:17:44.11:0,44,457	1/1:28,0:28:51.19:426,51,0	1/1:24,1:25:36.16:308,36,0	1/1:20,0:20:3.01:38,3,0	1/1:21,0:20:29.82:257,30,0	1/1:22,0:22:35.25:263,35,0	1/1:6,24:29:73.01:687,73,0	1/1:13,0:13:21.79:166,22,0	1/1:21,0:20:45.02:521,45,0	1/1:17,0:17:32.17:236,32,0	1/1:17,1:18:26.67:266,27,0	0/1:27,0:27:30.76:31,0,65	1/1:9,16:24:11.66:150,12,0	1/1:28,0:28:24.78:261,25,0	1/1:8,10:17:6.37:105,6,0	1/1:5,0:5:8.90:83,9,0	1/1:8,19:27:20.93:238,21,0	1/1:30,0:26:33.16:277,33,0	1/1:11,0:10:20.99:200,21,0	1/1:4,15:18:8.48:132,8,0	1/1:8,19:27:3.01:52,3,0	1/1:22,1:23:46.11:434,46,0	1/1:4,12:17:35.83:359,36,0	1/1:4,19:22:14.58:212,15,0	1/1:2,1:2:3.01:52,3,0
chr10	25834038	.	T	TA	1843.82	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-9.383;DP=590;FS=19.765;HRun=7;HaplotypeScore=54.9230;InbreedingCoeff=0.9595;MQ=79.15;MQ0=0;MQRankSum=-2.633;QD=28.37;ReadPosRankSum=-2.142;VQSLOD=1.5615;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,28:29:58.29:986,58,0	0/0:9,0:9:18.03:0,18,174	0/0:24,0:24:56.98:0,57,528	0/0:19,0:16:27.01:0,27,253	0/0:31,0:31:90.13:0,90,863	0/0:26,0:25:78.13:0,78,753	0/0:19,0:19:54.09:0,54,522	1/1:4,19:23:57.15:674,57,0	0/0:28,0:28:75.09:0,75,717	0/0:31,0:31:87.12:0,87,835	0/0:20,0:20:57.09:0,57,550	0/0:25,0:25:69.10:0,69,666	0/0:22,0:22:57.06:0,57,543	0/0:17,0:17:45.07:0,45,435	0/0:25,0:25:63.10:0,63,608	0/0:18,0:18:48.08:0,48,464	1/1:4,9:13:27.08:326,27,0	0/0:9,0:9:24.03:0,24,232	0/0:24,0:24:63.05:0,63,592	0/0:25,0:25:72.12:0,72,695	0/0:25,0:25:66.08:0,66,632	0/0:19,0:19:54.09:0,54,521	0/0:18,0:18:51.08:0,51,493	0/0:21,0:21:57.09:0,57,550	0/0:22,0:22:60.10:0,60,579	0/0:19,0:19:54.09:0,54,521	0/0:26,0:26:69.11:0,69,666	0/0:3,0:3:6.01:0,6,58
chr10	25834151	.	G	GT	3616.65	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-10.142;DP=654;FS=0.909;HRun=1;HaplotypeScore=106.8510;InbreedingCoeff=0.9983;MQ=83.59;MQ0=0;MQRankSum=-4.648;QD=38.07;ReadPosRankSum=-0.660;VQSLOD=3.3494;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,42:43:99:1664,111,0	0/0:7,0:7:21.07:0,21,273	0/0:18,0:18:51.15:0,51,637	0/0:21,0:21:51.16:0,51,640	0/0:29,0:29:84.27:0,84,1090	0/0:26,0:25:78.24:0,78,997	0/0:16,0:16:48.13:0,48,607	1/1:4,27:32:87.72:1234,88,0	0/0:27,0:27:78.21:0,78,970	0/0:30,0:30:84.26:0,84,1061	0/0:21,0:21:57.17:0,57,715	0/0:23,0:23:69.22:0,69,886	0/0:21,0:21:63.17:0,63,798	0/0:23,0:23:69.17:0,69,850	0/0:22,0:22:66.20:0,66,842	0/0:21,0:21:63.20:0,63,818	1/1:0,20:20:48.16:719,48,0	0/0:10,0:10:30.10:0,30,389	0/0:20,0:20:54.14:0,54,700	0/0:31,0:31:90.29:0,90,1168	0/0:21,0:21:60.18:0,60,764	0/0:32,0:32:93.30:0,93,1207	0/0:16,0:16:48.13:0,48,606	0/0:28,0:28:78.25:0,78,1007	0/0:23,0:23:69.21:0,69,881	0/0:29,0:29:87.27:0,87,1117	0/0:30,0:29:87.28:0,87,1129	0/0:14,0:14:42.14:0,42,545
chr10	25835051	.	ATCAATCAATCAG	A	15612.84	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=5.895;DP=521;FS=5.325;HRun=0;HaplotypeScore=175.5564;InbreedingCoeff=0.7569;MQ=61.43;MQ0=0;MQRankSum=-4.694;QD=33.50;ReadPosRankSum=4.177;VQSLOD=4.0506;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,13:16:14.72:361,15,0	1/1:1,6:7:12.04:417,12,0	0/0:20,0:20:21.02:0,21,588	0/0:20,0:21:24.08:0,24,853	1/1:3,10:13:20.99:597,21,0	1/1:6,16:22:24.08:767,24,0	1/1:5,6:11:9.03:313,9,0	1/1:14,16:29:46.36:849,46,0	1/1:6,4:11:6.02:208,6,0	1/1:10,15:25:42.11:989,42,0	1/1:6,15:21:39.13:1165,39,0	1/1:5,11:16:18.06:558,18,0	1/1:11,17:28:29.95:1042,30,0	1/1:6,14:20:18.06:625,18,0	0/0:13,0:13:33.11:0,33,1584	1/1:13,19:32:44.99:1517,45,0	1/1:9,7:15:6.02:208,6,0	1/1:5,0:5:3.01:49,3,0	1/1:16,11:27:30.09:685,30,0	1/1:13,16:29:30.06:761,30,0	1/1:7,10:17:3.01:82,3,0	1/1:4,14:18:27.05:769,27,0	1/1:7,12:19:18.50:557,19,0	1/1:11,1:12:27.09:658,27,0	1/1:4,11:15:15.05:473,15,0	1/1:8,13:21:42.13:1132,42,0	1/1:14,17:31:17.97:624,18,0	1/1:1,3:4:6.02:208,6,0
chr10	25835062	.	AG	A	1461.30	PASS	AB=0.977;AC=22;AF=0.393;AN=56;BaseQRankSum=14.202;DP=450;FS=3.541;HRun=1;HaplotypeScore=117.3697;InbreedingCoeff=-0.5338;MQ=57.91;MQ0=0;MQRankSum=-10.321;QD=4.22;ReadPosRankSum=6.828;VQSLOD=0.5851;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:14,1:15:43.83:44,0,125	0/1:7,0:7:18.95:19,0,36	0/0:18,0:18:51.16:0,51,778	0/0:23,0:21:50.95:0,51,757	0/1:12,0:12:91.62:92,0,119	0/1:20,0:20:14.32:14,0,183	0/1:9,0:9:14.97:15,0,127	0/1:24,0:23:99:330,0,482	0/0:8,0:8:4.69:0,5,180	0/1:20,0:20:99:155,0,337	0/1:17,0:17:99:190,0,147	0/1:14,0:15:6.45:6,0,169	0/1:22,0:22:55.52:56,0,112	0/1:18,0:18:20.74:21,0,122	0/0:12,0:12:36.12:0,36,576	0/1:27,0:27:27.01:27,0,362	0/0:14,0:13:1.68:0,2,132	0/0:4,0:4:9.03:0,9,144	0/1:19,0:19:99:124,0,449	0/1:23,0:23:24.76:25,0,497	0/1:15,0:15:20.75:21,0,266	0/1:16,0:16:99:108,0,181	0/1:17,0:17:5.70:6,0,236	0/1:7,7:14:99:172,0,249	0/1:13,0:13:5.69:6,0,120	0/1:19,0:19:99:133,0,286	0/0:25,0:24:2.88:0,3,326	1/1:3,1:4:7.08:53,7,0
chr10	25836244	.	ACTC	A	1844	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=-1.057;DP=438;FS=0.000;HRun=0;HaplotypeScore=101.9291;InbreedingCoeff=0.7449;MQ=76.95;MQ0=1;MQRankSum=-1.544;QD=22.77;ReadPosRankSum=-0.740;VQSLOD=3.3757;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,11:11:24.08:418,24,0	0/0:14,0:14:42.05:0,42,393	0/0:28,0:17:1.33:0,1,463	0/1:27,0:20:52.19:52,0,443	0/0:29,0:29:77.76:0,78,726	0/0:20,0:20:51.03:0,51,471	0/0:7,0:7:18.02:0,18,166	1/1:12,7:20:60:699,60,0	0/0:15,0:15:45.04:0,45,419	0/0:22,0:22:63.06:0,63,613	0/0:24,0:24:65.19:0,65,599	0/0:12,0:12:33.03:0,33,305	0/0:12,0:12:35.96:0,36,342	0/0:12,0:12:36.03:0,36,333	0/0:9,0:9:27.04:0,27,255	0/0:13,0:13:36.05:0,36,363	1/1:1,21:23:48.16:822,48,0	0/0:14,0:14:36:0,36,327	0/0:16,0:16:41.90:0,42,425	0/0:19,0:19:57.01:0,57,543	0/0:9,0:9:20.85:0,21,177	0/0:5,0:5:15.02:0,15,143	0/0:14,0:14:39.06:0,39,374	0/0:14,0:14:41.72:0,42,377	0/0:10,0:10:24.02:0,24,220	0/0:13,0:13:38.56:0,39,367	0/0:22,0:22:62.97:0,63,575	0/0:3,0:3:5.99:0,6,52
chr10	25836246	.	TC	T	6747.45	PASS	AB=1.000;AC=53;AF=0.946;AN=56;BaseQRankSum=-5.517;DP=447;FS=7.656;HRun=10;HaplotypeScore=71.3127;InbreedingCoeff=0.4099;MQ=78.84;MQ0=2;MQRankSum=-3.407;QD=16.50;ReadPosRankSum=6.030;VQSLOD=5.0528;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:11:17.36:53,17,0	1/1:2,12:14:35.99:313,36,0	0/0:37,0:20:3.85:0,4,260	0/1:30,0:22:10.51:11,0,136	1/1:3,26:29:74.97:649,75,0	1/1:2,17:19:44.99:391,45,0	1/1:1,6:7:15:130,15,0	1/1:21,0:21:15.99:48,16,0	1/1:2,13:15:38.99:339,39,0	1/1:6,16:22:47.65:399,48,0	1/1:6,17:24:46.89:379,47,0	1/1:3,9:12:26.99:234,27,0	1/1:2,10:12:32.99:286,33,0	1/1:2,10:12:29.99:260,30,0	1/1:0,9:9:26.99:234,27,0	1/1:2,10:12:26.98:234,27,0	1/1:23,0:23:35.52:110,36,0	1/1:2,13:15:29.99:260,30,0	1/1:4,11:15:5.05:259,5,0	1/1:4,14:18:44.02:369,44,0	1/1:2,6:8:14.99:130,15,0	1/1:0,5:5:15:130,15,0	1/1:0,15:15:38.93:330,39,0	1/1:1,12:14:38.98:335,39,0	1/1:3,7:10:14.99:130,15,0	1/1:2,10:13:32.02:263,32,0	1/1:5,16:21:50.98:442,51,0	1/1:1,2:3:3:26,3,0
chr10	25836641	.	AAGG	A	1180.21	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.611;DP=717;FS=1.638;HRun=0;HaplotypeScore=102.9657;InbreedingCoeff=0.8490;MQ=90.39;MQ0=0;MQRankSum=-2.318;QD=39.34;ReadPosRankSum=-0.671;VQSLOD=4.4338;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,126,2725	0/0:10,0:10:30.10:0,30,691	0/0:20,0:20:53.66:0,54,1080	0/0:39,0:38:99:0,108,2292	0/0:23,0:23:63.20:0,63,1387	0/0:9,0:9:24.07:0,24,510	0/0:26,0:26:78.27:0,78,1798	0/0:21,0:21:60.19:0,60,1279	0/0:42,0:42:99:0,126,2766	0/0:19,0:19:54.17:0,54,1200	0/0:17,0:17:42.12:0,42,865	0/0:23,0:23:69.24:0,69,1571	0/0:35,0:35:99:0,105,2377	0/0:20,0:20:60.21:0,60,1379	1/1:0,30:30:75.26:1275,75,0	0/0:26,0:26:78.26:0,78,1734	0/0:54,0:54:99:0,154,3462	0/0:27,0:26:78.25:0,78,1721	0/0:16,0:15:48.16:0,48,1024	0/0:20,0:20:60.21:0,60,1326	0/0:43,0:43:99:0,129,2897	0/0:20,0:20:60.21:0,60,1382	0/0:20,0:20:60.19:0,60,1314	0/0:31,0:31:87.27:0,87,1848	0/0:21,0:21:60.20:0,60,1325	0/0:24,0:23:66.22:0,66,1466	0/0:38,0:38:99:0,111,2512	0/0:1,0:1:3.01:0,3,69
chr10	25837049	.	GGA	G	836.69	PASS	AB=0.844;AC=27;AF=0.643;AN=42;BaseQRankSum=-0.360;DP=195;FS=0.000;HRun=0;HaplotypeScore=26.5723;InbreedingCoeff=0.3064;MQ=21.31;MQ0=56;MQRankSum=-2.438;QD=7.47;ReadPosRankSum=0.080;VQSLOD=2.6925;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:11,1:5:5.92:0,6,42	./.	./.	./.	./.	./.	1/1:4,1:3:5.94:43,6,0	0/0:10,0:5:5.88:0,6,63	1/1:3,3:3:6.02:85,6,0	1/1:4,6:5:14.88:185,15,0	0/0:4,2:5:0.55:0,1,1	0/1:4,3:4:6.62:116,0,7	1/1:4,2:4:5.91:58,6,0	1/1:3,4:6:8.03:96,8,0	0/0:8,0:4:9.03:0,9,165	0/1:4,0:4:10.55:11,0,13	0/0:10,0:3:8.86:0,9,57	1/1:6,1:2:6.02:76,6,0	1/1:4,1:1:3.01:43,3,0	1/1:1,2:2:2.96:19,3,0	1/1:21,1:10:1.55:4,2,0	1/1:4,2:3:2.74:19,3,0	./.	0/0:6,1:3:1.25:0,1,3	1/1:1,1:2:3.01:43,3,0	1/1:9,3:5:6.53:124,7,0	0/1:8,2:7:20.92:48,0,21	./.
chr10	25837185	.	AATTCCTCCATTAAGGC	A	2527.24	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.004;DP=572;FS=22.580;HRun=0;HaplotypeScore=237.2906;InbreedingCoeff=0.9905;MQ=69.57;MQ0=0;MQRankSum=-5.831;QD=63.18;ReadPosRankSum=-2.158;VQSLOD=1.7367;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,12:12:18.06:834,18,0	0/0:10,0:10:30.10:0,30,2202	0/0:11,0:11:30.10:0,30,1381	0/0:20,0:20:57.18:0,57,3379	0/0:32,0:32:93.31:0,93,6838	0/0:30,0:29:87.30:0,87,6707	0/0:22,0:22:63.15:0,63,4391	1/1:0,14:14:39.07:1133,39,0	0/0:15,0:15:42.14:0,42,2969	0/0:24,0:24:69.24:0,69,5278	0/0:14,0:14:42.14:0,42,3003	0/0:21,0:21:63.22:0,63,4272	0/0:17,0:17:51.17:0,51,3708	0/0:17,0:17:51.07:0,51,3487	0/0:31,0:31:90.31:0,90,6535	0/0:22,0:22:60.21:0,60,4024	1/1:1,13:14:15.05:700,15,0	0/0:9,0:9:27.07:0,27,1925	0/0:16,0:16:45.14:0,45,2431	0/0:24,0:24:72.24:0,72,5272	0/0:23,0:23:63.15:0,63,4469	0/0:25,0:25:75.25:0,75,5304	0/0:24,0:24:63.22:0,63,4831	0/0:22,0:22:63.22:0,63,4687	0/0:31,0:31:93.32:0,93,7015	0/0:37,0:37:99:0,111,8311	0/0:24,0:24:72.25:0,72,5434	0/0:11,0:11:33.11:0,33,2431
chr10	25837705	.	TG	T	2175.64	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=10.710;DP=445;FS=1.713;HRun=1;HaplotypeScore=45.7538;InbreedingCoeff=0.9925;MQ=86.13;MQ0=0;MQRankSum=-3.219;QD=37.51;ReadPosRankSum=-1.386;VQSLOD=3.1784;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,22:22:63.21:880,63,0	0/0:9,0:9:27.09:0,27,404	0/0:16,0:16:41.30:0,41,646	0/0:18,0:18:47.41:0,47,729	0/0:22,0:22:66.19:0,66,947	0/0:12,0:12:36.09:0,36,495	0/0:13,0:13:39.08:0,39,518	1/1:0,25:25:75.21:996,75,0	0/0:17,0:17:48.06:0,48,649	0/0:18,0:18:54.16:0,54,771	0/0:20,0:20:60.16:0,60,873	0/0:18,0:18:54.13:0,54,743	0/0:12,0:12:36.07:0,36,476	0/0:12,0:12:36.12:0,36,537	0/0:9,0:9:27.09:0,27,403	0/0:12,0:12:36.11:0,36,519	1/1:2,9:11:33.09:442,33,0	0/0:8,0:8:24.08:0,24,357	0/0:16,0:16:48.15:0,48,700	0/0:19,0:19:54.15:0,54,766	0/0:13,0:13:39.13:0,39,582	0/0:12,0:12:36.11:0,36,519	0/0:20,0:20:60.18:0,60,875	0/0:14,0:14:42.14:0,42,623	0/0:23,0:23:69.21:0,69,994	0/0:22,0:22:66.14:0,66,939	0/0:27,0:27:81.24:0,81,1169	0/0:5,0:5:15.05:0,15,224
chr10	25837788	.	TA	T	1404.67	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.126;DP=388;FS=0.546;HRun=8;HaplotypeScore=38.1903;InbreedingCoeff=0.9433;MQ=70.42;MQ0=0;MQRankSum=-0.553;QD=25.08;ReadPosRankSum=-0.526;VQSLOD=3.6071;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:42.13:0,42,507	0/0:9,0:9:24.07:0,24,290	0/0:5,0:5:8.99:0,9,85	0/0:4,1:5:8.67:0,9,62	0/0:14,0:14:39.12:0,39,471	0/0:19,0:19:54.17:0,54,651	0/0:12,0:12:33.10:0,33,398	1/1:1,22:23:66.07:620,66,0	0/0:16,0:16:39.12:0,39,470	0/0:24,0:24:66.20:0,66,796	0/0:27,0:26:72.19:0,72,844	0/0:12,0:12:36.11:0,36,433	0/0:13,0:13:36.11:0,36,432	0/0:9,0:9:24.07:0,24,289	1/1:0,9:9:27.04:261,27,0	0/0:12,0:12:30.09:0,30,362	1/1:0,24:24:69.11:666,69,0	0/0:7,0:7:21.05:0,21,241	0/0:12,0:12:30.08:0,30,352	0/0:19,0:19:54.15:0,54,642	0/0:5,0:5:15.05:0,15,180	0/0:6,0:6:18.06:0,18,217	0/0:7,0:7:18.04:0,18,205	0/0:10,0:10:27.04:0,27,310	0/0:15,0:15:42.13:0,42,507	0/0:24,0:24:57.16:0,57,678	0/0:24,0:24:69.20:0,69,814	0/0:9,0:9:27.08:0,27,326
chr10	25837984	.	G	GA	230.66	PASS	AB=0.926;AC=5;AF=0.089;AN=56;BaseQRankSum=0.767;DP=492;FS=5.868;HRun=10;HaplotypeScore=54.0076;InbreedingCoeff=0.4153;MQ=70.78;MQ0=1;MQRankSum=-0.159;QD=3.55;ReadPosRankSum=-0.362;VQSLOD=-0.5937;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,14:15:30.08:320,30,0	0/0:5,0:5:14.98:0,15,123	0/1:14,1:13:12.38:12,0,86	0/0:16,0:15:18.84:0,19,174	0/0:19,0:20:46.95:0,47,372	0/0:13,0:13:32.95:0,33,271	0/0:11,0:11:29.95:0,30,243	0/0:30,0:30:59.84:0,60,488	0/0:17,1:18:15.96:0,16,337	0/0:18,0:18:44.92:0,45,369	0/1:22,2:24:0.84:1,0,362	0/0:11,0:12:29:0,29,228	0/0:14,0:14:41.95:0,42,345	0/0:20,0:20:50.91:0,51,416	0/1:10,1:11:5.02:5,0,170	0/0:10,0:10:23.96:0,24,197	0/0:30,0:30:48.85:0,49,540	0/0:11,0:11:29.93:0,30,246	0/0:27,0:27:65.90:0,66,540	0/0:27,0:28:58.92:0,59,474	0/0:16,0:16:41.94:0,42,345	0/0:16,0:16:41.93:0,42,344	0/0:22,0:22:41.90:0,42,345	0/0:9,0:9:23.95:0,24,193	0/0:17,0:17:35.92:0,36,296	0/0:29,1:30:45.92:0,46,584	0/0:24,0:24:64.93:0,65,520	0/0:8,0:8:23.97:0,24,197
chr10	25838288	.	AC	A	2751.21	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=13.589;DP=639;FS=1.440;HRun=1;HaplotypeScore=75.7218;InbreedingCoeff=0.9963;MQ=87.83;MQ0=0;MQRankSum=-3.223;QD=33.15;ReadPosRankSum=-1.200;VQSLOD=3.1110;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,31:34:99:1232,99,0	0/0:8,0:8:24.08:0,24,359	0/0:26,1:27:61.82:0,62,985	0/0:21,0:21:60.06:0,60,839	0/0:30,0:30:90.30:0,90,1326	0/0:32,0:32:96.28:0,96,1393	0/0:13,0:13:39.13:0,39,584	1/1:7,24:30:85.59:1038,86,0	0/0:19,0:19:57.19:0,57,853	0/0:25,0:25:72.24:0,72,1055	0/0:30,0:30:90.27:0,90,1301	0/0:21,0:21:63.20:0,63,921	0/0:19,0:19:57.14:0,57,804	0/0:12,0:12:36.11:0,36,517	0/0:21,0:21:63.15:0,63,859	0/0:24,0:24:72.20:0,72,1017	1/1:3,15:18:51.10:624,51,0	0/0:13,0:13:36.57:0,37,517	0/0:14,0:14:42.13:0,42,611	0/0:36,0:36:99:0,108,1511	0/0:24,0:24:72.21:0,72,1033	0/0:29,0:29:87.26:0,87,1258	0/0:27,0:27:81.22:0,81,1139	0/0:27,0:27:81.22:0,81,1167	0/0:25,0:25:75.24:0,75,1102	0/0:22,0:22:66.22:0,66,989	0/0:31,0:31:93.20:0,93,1322	0/0:6,0:6:18.05:0,18,240
chr10	25839513	.	GTC	G	11259.38	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-2.615;DP=633;FS=6.322;HRun=0;HaplotypeScore=88.7082;InbreedingCoeff=0.9409;MQ=69.87;MQ0=7;MQRankSum=1.867;QD=20.36;ReadPosRankSum=7.020;VQSLOD=4.5027;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:15,28:43:24.61:514,25,0	1/1:1,6:7:15.05:187,15,0	0/0:31,0:18:36.04:0,36,504	0/0:49,0:30:43.17:0,43,481	1/1:2,23:25:32.98:354,33,0	1/1:3,21:24:48.15:600,48,0	1/1:6,28:34:47.89:600,48,0	1/1:5,13:18:22.11:415,22,0	1/1:4,15:18:27.09:338,27,0	1/1:2,19:21:57.13:670,57,0	1/1:6,13:19:35.99:430,36,0	1/1:2,15:17:30.09:375,30,0	1/1:1,11:12:27.09:338,27,0	1/1:4,15:19:33.11:413,33,0	1/1:2,14:16:12.04:150,12,0	1/1:3,17:20:36.12:450,36,0	1/1:8,23:31:41.84:484,42,0	1/1:3,16:19:36.11:450,36,0	1/1:5,14:19:42.10:497,42,0	1/1:4,23:27:54.03:621,54,0	1/1:4,11:15:21.07:263,21,0	1/1:2,14:16:27.09:338,27,0	1/1:3,24:27:32.48:412,32,0	1/1:10,18:27:42.13:525,42,0	1/1:0,13:12:24.08:300,24,0	1/1:3,25:28:75.21:915,75,0	1/1:9,17:26:42.09:508,42,0	1/1:0,10:10:9.03:112,9,0
chr10	25840408	.	T	TAA	14558.15	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=3.338;DP=613;FS=6.712;HRun=10;HaplotypeScore=119.0448;InbreedingCoeff=0.9488;MQ=79.49;MQ0=2;MQRankSum=-2.039;QD=30.14;ReadPosRankSum=2.089;VQSLOD=4.4134;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:93.15:0,93,944	1/1:2,9:13:32.43:425,32,0	0/0:20,0:21:35.32:0,35,325	0/0:14,0:15:3.80:0,4,189	1/1:8,19:29:68.16:911,68,0	1/1:4,27:31:69.23:1026,69,0	1/1:2,12:15:33.84:453,34,0	0/0:26,0:26:57.01:0,57,561	1/1:1,9:10:24.08:357,24,0	1/1:3,22:28:73.68:988,74,0	1/1:5,24:31:74.18:1023,74,0	1/1:5,9:17:32.07:402,32,0	1/1:3,12:16:39.13:566,39,0	1/1:3,13:18:38.49:544,38,0	1/1:4,1:22:10.61:137,11,0	1/1:0,13:15:38.62:546,39,0	0/0:32,0:32:81.15:0,81,822	1/1:1,10:12:15.05:223,15,0	1/1:6,5:16:32.02:351,32,0	1/1:5,36:44:77.30:1419,77,0	1/1:1,11:12:30.10:447,30,0	1/1:4,23:33:79.20:1022,79,0	1/1:6,10:17:36.08:508,36,0	1/1:2,15:16:42.14:625,42,0	1/1:1,9:11:27.09:403,27,0	1/1:6,23:31:74.39:958,74,0	1/1:4,15:20:44.51:618,45,0	1/1:8,14:24:39.83:605,40,0
chr10	25840837	.	CA	C	13227.87	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=4.739;DP=637;FS=4.964;HRun=9;HaplotypeScore=100.9264;InbreedingCoeff=0.9969;MQ=80.27;MQ0=0;MQRankSum=-5.333;QD=22.73;ReadPosRankSum=2.617;VQSLOD=5.1775;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,0:31:55:162,55,0	1/1:1,8:9:24.01:220,24,0	0/0:12,0:14:25.31:0,25,273	0/0:18,0:18:38.66:0,39,401	1/1:2,35:37:99:933,102,0	1/1:0,21:21:60.03:549,60,0	1/1:2,12:14:24.01:220,24,0	1/1:2,24:26:72.01:652,72,0	1/1:2,15:17:39.02:357,39,0	1/1:4,28:32:84:758,84,0	1/1:2,26:28:78.04:714,78,0	1/1:6,18:24:51.02:467,51,0	1/1:1,21:22:57.03:522,57,0	1/1:4,21:25:63.03:577,63,0	0/0:23,0:23:51.14:0,51,579	1/1:2,24:26:63.03:577,63,0	1/1:1,20:21:57.03:522,57,0	1/1:1,15:16:33.02:302,33,0	1/1:1,15:16:45.02:412,45,0	1/1:2,43:45:99:1116,123,0	1/1:0,15:15:45.02:412,45,0	1/1:4,12:16:36.02:330,36,0	1/1:1,23:24:63.03:577,63,0	1/1:0,12:12:30.02:275,30,0	1/1:2,25:27:75.04:686,75,0	1/1:3,31:34:93.04:847,93,0	1/1:3,31:34:90.05:824,90,0	1/1:1,9:10:24.01:220,24,0
chr10	25841055	.	GC	G	2516.79	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=10.256;DP=608;FS=4.501;HRun=1;HaplotypeScore=89.8270;InbreedingCoeff=0.9899;MQ=88.60;MQ0=0;MQRankSum=-4.420;QD=36.48;ReadPosRankSum=-2.078;VQSLOD=3.0225;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,25:25:69.16:939,69,0	0/0:5,0:5:15.05:0,15,238	0/0:21,0:21:60.15:0,60,901	0/0:24,0:24:69.21:0,69,1061	0/0:23,0:23:66.23:0,66,1055	0/0:21,0:21:60.15:0,60,899	0/0:19,0:19:57.19:0,57,911	1/1:0,36:36:99:1468,105,0	0/0:28,0:28:84.29:0,84,1340	0/0:29,0:29:87.29:0,87,1369	0/0:15,0:15:45.15:0,45,719	0/0:25,0:25:75.24:0,75,1176	0/0:32,0:32:96.24:0,96,1437	0/0:16,0:16:48.15:0,48,741	0/0:27,0:27:81.26:0,81,1270	0/0:32,0:32:96.31:0,96,1509	1/1:0,8:8:18.06:251,18,0	0/0:11,0:11:33.11:0,33,523	0/0:25,0:25:72.22:0,72,1105	0/0:26,0:26:75.26:0,75,1198	0/0:23,0:23:69.22:0,69,1079	0/0:20,0:20:60.19:0,60,936	0/0:18,0:18:51.17:0,51,815	0/0:8,0:8:24.04:0,24,353	0/0:27,0:27:81.27:0,81,1273	0/0:34,0:34:99:0,99,1542	0/0:21,0:21:60.18:0,60,928	0/0:9,0:9:24.08:0,24,383
chr10	25841244	.	CTT	C	3012.27	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=11.229;DP=617;FS=7.007;HRun=2;HaplotypeScore=80.4452;InbreedingCoeff=0.9994;MQ=86.28;MQ0=0;MQRankSum=-7.071;QD=37.19;ReadPosRankSum=-3.146;VQSLOD=2.5775;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,22:24:54.17:814,54,0	0/0:15,0:15:45.14:0,45,846	0/0:22,0:22:66.05:0,66,1097	0/0:20,0:20:51.15:0,51,979	0/0:25,0:25:75.26:0,75,1513	0/0:13,0:13:39.11:0,39,722	0/0:20,0:20:60.20:0,60,1174	1/1:0,44:44:99:1866,123,0	0/0:17,0:17:51.18:0,51,1026	0/0:34,0:34:99:0,102,1968	0/0:22,0:22:66.21:0,66,1232	0/0:26,0:26:78.24:0,78,1483	0/0:22,0:22:66.23:0,66,1340	0/0:14,0:14:39.13:0,39,778	0/0:25,0:25:75.25:0,75,1488	0/0:28,0:28:84.26:0,84,1633	1/1:1,12:13:30.10:476,30,0	0/0:14,0:14:42.14:0,42,785	0/0:16,0:16:48.16:0,48,929	0/0:30,0:30:87.26:0,87,1649	0/0:14,0:14:42.14:0,42,819	0/0:15,0:15:45.13:0,45,845	0/0:39,0:39:99:0,117,2249	0/0:20,0:20:60.19:0,60,1160	0/0:22,0:22:66.23:0,66,1333	0/0:28,0:28:84.26:0,84,1603	0/0:25,0:25:75.21:0,75,1415	0/0:10,0:10:27.09:0,27,537
chr10	25841272	.	C	CTGG	3894.41	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=7.920;DP=624;FS=1.684;HRun=0;HaplotypeScore=97.5000;InbreedingCoeff=0.9987;MQ=86.84;MQ0=0;MQRankSum=-11.770;QD=42.80;ReadPosRankSum=-4.295;VQSLOD=3.4861;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,24:34:62.27:1383,62,0	0/0:12,0:12:36.12:0,36,614	0/0:27,0:27:69.22:0,69,1127	0/0:19,0:19:33.68:0,34,530	0/0:31,0:31:87.30:0,87,1475	0/0:8,0:8:24.08:0,24,409	0/0:17,0:17:51.17:0,51,870	1/1:14,26:40:78.27:1760,78,0	0/0:20,0:20:54.18:0,54,918	0/0:29,0:29:72.25:0,72,1225	0/0:20,0:20:54.16:0,54,866	0/0:22,0:22:66.23:0,66,1123	0/0:26,0:26:75.22:0,75,1200	0/0:12,0:12:36.11:0,36,585	0/0:22,0:22:63.20:0,63,1042	0/0:25,0:25:69.24:0,69,1171	1/1:3,14:17:36.06:752,36,0	0/0:16,0:16:44.52:0,45,724	0/0:24,0:24:72.25:0,72,1221	0/0:29,0:29:84.27:0,84,1407	0/0:22,0:22:60.17:0,60,964	0/0:15,0:15:42.14:0,42,708	0/0:36,0:36:99:0,105,1756	0/0:20,0:20:57.20:0,57,969	0/0:25,0:25:72.25:0,72,1223	0/0:23,0:23:69.23:0,69,1151	0/0:24,0:24:72.25:0,72,1225	0/0:9,0:9:27.09:0,27,461
chr10	25841874	.	T	TGAGA	18291	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-5.276;DP=617;FS=3.588;HRun=0;HaplotypeScore=149.5454;InbreedingCoeff=0.8727;MQ=72.81;MQ0=2;MQRankSum=-4.042;QD=34.84;ReadPosRankSum=2.510;VQSLOD=5.2189;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,24:42:56.93:1348,57,0	1/1:4,5:9:15.05:368,15,0	0/0:31,0:24:27.67:0,28,395	0/0:41,0:29:4.87:0,5,278	1/1:13,15:30:27.09:668,27,0	1/1:11,10:21:30.10:726,30,0	1/1:14,8:23:29.84:656,30,0	1/1:17,5:27:43.66:760,44,0	1/1:7,16:28:59.14:1236,59,0	1/1:11,7:18:30.10:742,30,0	1/1:12,15:28:30.10:742,30,0	1/1:4,7:12:23.82:533,24,0	1/1:4,2:7:6.02:149,6,0	1/1:8,7:20:23.55:470,24,0	0/0:7,0:18:36.05:0,36,353	1/1:4,16:20:45.15:1116,45,0	1/1:8,12:20:30.10:726,30,0	1/1:5,7:12:18.06:447,18,0	1/1:11,4:16:17.80:384,18,0	1/1:9,18:30:54.19:1337,54,0	1/1:5,8:15:9.03:222,9,0	1/1:5,8:17:26.03:422,26,0	1/1:9,8:18:24.08:594,24,0	1/1:7,18:25:48.16:1190,48,0	1/1:11,11:23:29.84:681,30,0	1/1:11,12:26:54.18:1139,54,0	1/1:9,18:29:59.94:1337,60,0	1/1:2,4:6:12.04:297,12,0
chr10	25842338	.	G	GT	217.96	PASS	AC=2;AF=0.037;AN=54;BaseQRankSum=-4.317;DP=564;FS=0.000;HRun=8;HaplotypeScore=66.3952;InbreedingCoeff=0.8905;MQ=67.24;MQ0=2;MQRankSum=-0.387;QD=15.57;ReadPosRankSum=1.600;VQSLOD=3.6153;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,99,906	0/0:9,0:9:21.01:0,21,192	0/0:23,0:15:24.25:0,24,241	0/0:13,0:10:5.53:0,6,30	0/0:27,0:27:72.02:0,72,654	0/0:14,0:14:36.02:0,36,329	0/0:15,0:15:30.01:0,30,275	0/0:33,0:33:81.03:0,81,735	0/0:20,0:20:57.01:0,57,515	0/0:26,0:26:63.03:0,63,577	0/0:24,0:24:63.01:0,63,572	0/0:23,0:24:64.98:0,65,561	0/0:14,0:14:33:0,33,302	0/0:16,0:16:45.02:0,45,410	1/1:4,10:14:27.08:312,27,0	0/0:16,0:16:42.01:0,42,380	0/0:20,0:20:60.03:0,60,549	0/0:11,0:11:33.02:0,33,302	0/0:25,0:25:54:0,54,490	0/0:19,0:19:47.84:0,48,421	0/0:24,0:24:69:0,69,621	0/0:18,0:18:51.02:0,51,463	0/0:19,0:19:47.97:0,48,427	0/0:29,0:29:80.97:0,81,728	0/0:33,0:33:83.97:0,84,755	0/0:21,0:21:48.01:0,48,439	0/0:19,0:19:48.02:0,48,439	./.
chr10	25842510	.	TA	T	9217.84	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=1.952;DP=561;FS=3.087;HRun=9;HaplotypeScore=125.6002;InbreedingCoeff=0.9788;MQ=79.16;MQ0=0;MQRankSum=-2.783;QD=21.95;ReadPosRankSum=2.925;VQSLOD=3.9520;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:2,0:37:85.37:0,85,441	1/1:0,12:12:36.02:328,36,0	0/0:25,1:15:32.01:0,32,267	0/0:25,0:18:17.65:0,18,192	1/1:2,25:27:74.92:661,75,0	1/1:2,12:14:36.01:326,36,0	1/1:0,19:19:48.03:439,48,0	0/0:24,0:24:69.19:0,69,780	1/1:2,22:24:56.82:511,57,0	1/1:0,17:17:50.88:446,51,0	1/1:1,16:17:48:432,48,0	1/1:1,24:25:54.03:494,54,0	1/1:3,16:19:41.88:384,42,0	1/1:1,25:26:54.02:490,54,0	0/0:1,0:8:11.36:0,11,58	1/1:1,14:15:36.02:329,36,0	0/0:21,0:21:57.53:0,58,677	1/1:2,15:17:33.02:302,33,0	1/1:3,17:20:50.74:420,51,0	1/1:2,16:18:41.88:366,42,0	1/1:2,14:16:39.02:357,39,0	1/1:2,18:20:47.71:414,48,0	1/1:4,24:28:59.88:542,60,0	1/1:3,13:16:32.97:294,33,0	1/1:0,32:32:90.05:823,90,0	1/1:1,20:21:53.62:476,54,0	1/1:0,14:14:33.01:301,33,0	1/1:0,3:3:9:82,9,0
chr10	25843394	.	ATT	A	12846.96	PASS	AB=1.000;AC=53;AF=0.946;AN=56;BaseQRankSum=1.967;DP=526;FS=7.823;HRun=9;HaplotypeScore=160.6153;InbreedingCoeff=0.6341;MQ=66.25;MQ0=0;MQRankSum=-6.281;QD=25.39;ReadPosRankSum=4.673;VQSLOD=3.0403;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,24:24:66.18:761,66,0	1/1:4,8:12:15.03:175,15,0	0/0:19,0:17:41.70:0,42,543	0/1:15,0:14:18.14:18,0,218	1/1:3,27:30:63.17:733,63,0	1/1:1,17:18:51.15:594,51,0	1/1:1,7:8:21.06:245,21,0	1/1:4,14:18:39:426,39,0	1/1:4,29:33:81.23:943,81,0	1/1:3,21:24:57.14:653,57,0	1/1:4,18:22:54.15:628,54,0	1/1:5,17:22:48.14:559,48,0	1/1:4,16:20:39.11:453,39,0	1/1:4,8:12:24.06:280,24,0	1/1:6,9:15:27.06:312,27,0	1/1:5,13:18:39.10:454,39,0	1/1:2,21:23:54.15:629,54,0	1/1:2,9:11:21.05:244,21,0	1/1:2,15:16:39.11:455,39,0	1/1:8,15:23:48.10:547,48,0	1/1:0,6:6:18.05:210,18,0	1/1:3,16:19:45.12:524,45,0	1/1:6,14:20:39.09:454,39,0	1/1:2,6:8:18.05:210,18,0	1/1:4,23:27:63.17:734,63,0	1/1:6,18:24:54.13:629,54,0	1/1:4,23:27:60.17:699,60,0	1/1:2,8:10:24.06:280,24,0
chr10	25843404	.	C	CA	1168.29	PASS	AB=0.995;AC=31;AF=0.554;AN=56;BaseQRankSum=3.036;DP=471;FS=58.424;HRun=0;HaplotypeScore=186.6656;InbreedingCoeff=0.2657;MQ=68.95;MQ0=0;MQRankSum=9.101;QD=3.30;ReadPosRankSum=4.116;VQSLOD=1.2691;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:39.10:0,39,351	1/1:8,0:8:11.37:37,11,0	0/0:20,0:18:36.53:0,37,503	0/0:15,1:15:0.25:0,0,263	1/1:27,0:27:15.94:91,16,0	0/1:18,0:18:10.98:31,0,11	0/0:9,0:9:4.96:0,5,28	0/0:19,0:19:44.20:0,44,291	1/1:30,0:30:1.60:91,2,0	1/1:24,1:25:40.14:246,40,0	0/1:17,1:18:7.93:74,0,8	0/1:18,0:18:3.50:35,0,3	0/1:18,0:18:9.63:46,0,10	0/1:9,0:9:2.80:16,0,3	0/0:9,0:9:16.93:0,17,123	0/1:15,0:15:4.23:31,0,4	0/0:20,0:20:52.96:0,53,329	1/1:10,0:10:5.26:25,5,0	1/1:19,1:19:20.63:119,21,0	1/1:16,0:16:15.43:97,15,0	0/1:6,0:6:2.37:11,0,2	0/1:18,0:18:9.44:48,0,9	0/1:17,0:17:5.46:40,0,5	0/1:6,0:6:0.13:0,0,17	1/1:25,0:25:24.72:114,25,0	1/1:19,0:19:12.13:95,12,0	0/1:23,0:23:9.70:45,0,10	1/1:8,0:8:16.48:50,16,0
chr10	25843491	.	C	CT	10745.80	PASS	AC=50;AF=0.926;AN=54;BaseQRankSum=4.762;DP=408;FS=4.388;HRun=0;HaplotypeScore=170.8613;InbreedingCoeff=0.9637;MQ=56.60;MQ0=0;MQRankSum=-5.915;QD=28.20;ReadPosRankSum=5.059;VQSLOD=4.5681;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,21:24:66.11:704,66,0	1/1:1,9:10:30.04:321,30,0	0/0:15,0:15:35.05:0,35,328	0/0:12,0:11:23.92:0,24,214	1/1:1,19:20:42.11:467,42,0	1/1:1,14:15:33.02:351,33,0	1/1:4,14:18:50.99:506,51,0	1/1:6,7:13:38.98:380,39,0	1/1:1,19:20:57.09:615,57,0	1/1:4,21:25:63.05:666,63,0	1/1:1,15:16:36.10:400,36,0	1/1:1,17:18:51.01:534,51,0	1/1:1,11:12:32.59:344,33,0	1/1:2,9:11:30.03:322,30,0	1/1:0,11:11:33.09:362,33,0	1/1:2,9:11:32.96:338,33,0	1/1:1,11:12:30.02:316,30,0	1/1:2,3:5:12.01:122,12,0	1/1:3,7:11:30.05:309,30,0	1/1:1,19:20:57.10:618,57,0	1/1:2,3:5:11.90:103,12,0	1/1:2,13:15:42.02:440,42,0	1/1:0,23:23:54:575,54,0	1/1:0,9:9:21.06:234,21,0	1/1:2,14:16:44.98:466,45,0	1/1:3,20:23:69.14:757,69,0	1/1:3,15:18:48.01:496,48,0	./.
chr10	25843514	.	G	GA	13579.74	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=7.242;DP=456;FS=1.588;HRun=3;HaplotypeScore=165.2741;InbreedingCoeff=0.8952;MQ=66.18;MQ0=0;MQRankSum=-7.601;QD=31.88;ReadPosRankSum=5.578;VQSLOD=3.7231;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,30:32:72.15:963,72,0	1/1:2,10:12:27.09:376,27,0	0/0:19,0:19:53.84:0,54,579	0/0:11,0:10:27.05:0,27,301	1/1:7,14:21:48.13:629,48,0	1/1:2,18:20:42.11:565,42,0	1/1:0,17:17:42.14:587,42,0	1/1:3,17:20:51.14:693,51,0	1/1:4,19:23:51.17:713,51,0	1/1:4,19:23:54.17:741,54,0	1/1:3,13:16:39.13:545,39,0	1/1:2,14:16:36.09:482,36,0	1/1:1,9:10:21.07:294,21,0	1/1:2,10:12:27.01:334,27,0	1/1:0,15:15:39.13:545,39,0	1/1:1,10:11:27.09:377,27,0	1/1:4,14:18:35.99:437,36,0	1/1:0,6:6:12:146,12,0	1/1:4,9:13:30.10:417,30,0	1/1:4,21:25:60.59:795,61,0	1/1:1,7:8:21.07:292,21,0	1/1:4,12:16:36.11:487,36,0	1/1:5,20:25:66.18:879,66,0	1/1:2,11:13:21.07:291,21,0	1/1:0,11:11:30.06:397,30,0	1/1:1,20:21:60.20:839,60,0	1/1:1,20:21:51.17:713,51,0	1/1:0,1:1:3.01:42,3,0
chr10	25843951	.	A	AT	13100.47	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-7.418;DP=561;FS=5.392;HRun=8;HaplotypeScore=61.4224;InbreedingCoeff=0.9739;MQ=65.71;MQ0=0;MQRankSum=-1.501;QD=26.85;ReadPosRankSum=2.614;VQSLOD=5.7027;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:39:92.97:0,93,837	1/1:2,7:9:18.05:208,18,0	0/0:13,1:14:26.35:0,26,221	0/0:7,0:7:10.23:0,10,81	1/1:5,19:24:26.66:546,27,0	1/1:4,16:20:45.13:519,45,0	1/1:1,23:24:69.16:781,69,0	1/1:13,26:39:72.19:811,72,0	1/1:2,17:19:51.14:579,51,0	1/1:4,19:23:54.14:611,54,0	1/1:3,15:18:42.12:485,42,0	1/1:2,19:21:51.15:586,51,0	1/1:3,10:13:24.07:277,24,0	1/1:2,24:27:75.22:863,75,0	0/0:12,0:12:33.02:0,33,302	1/1:1,11:12:30.09:346,30,0	1/1:1,19:20:45.13:519,45,0	1/1:2,17:19:42.12:485,42,0	1/1:4,29:33:90.24:1018,90,0	1/1:2,21:23:48.14:554,48,0	1/1:2,12:14:33.10:381,33,0	1/1:4,15:19:35.98:415,36,0	1/1:1,20:21:60.18:692,60,0	1/1:2,13:15:30.09:346,30,0	1/1:2,15:17:11.65:388,12,0	1/1:0,24:25:69:762,69,0	1/1:4,18:22:51.15:583,51,0	1/1:1,10:11:30.09:346,30,0
chr10	25844124	.	CT	C	1309.21	PASS	AB=0.556;AC=41;AF=0.891;AN=46;BaseQRankSum=6.242;DP=129;FS=130.109;HRun=2;HaplotypeScore=33.1099;InbreedingCoeff=0.2965;MQ=46.58;MQ0=1;MQRankSum=-5.179;QD=14.88;ReadPosRankSum=3.649;VQSLOD=-0.0835;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,2:2:3.01:37,3,0	1/1:0,4:3:9.03:112,9,0	0/0:13,0:8:24.07:0,24,337	0/0:24,0:17:48.16:0,48,691	1/1:2,5:7:9.03:111,9,0	1/1:0,3:3:9.03:112,9,0	1/1:1,2:2:5.98:57,6,0	./.	1/1:0,3:1:3.01:37,3,0	1/1:1,3:3:5.57:73,6,0	./.	1/1:3,6:6:12:132,12,0	1/1:2,2:1:2.97:20,3,0	1/1:2,7:4:8.94:77,9,0	./.	1/1:0,2:2:3.01:37,3,0	1/1:0,2:2:3.01:38,3,0	1/1:0,1:1:3.01:38,3,0	1/1:1,0:1:2.97:20,3,0	1/1:1,3:3:6.02:74,6,0	./.	1/1:3,1:2:2.94:18,3,0	1/1:0,5:4:12.04:146,12,0	1/1:1,2:2:3.01:37,3,0	1/1:1,7:7:9.03:112,9,0	0/1:1,4:4:5.60:31,0,6	1/1:0,4:3:9.03:111,9,0	./.
chr10	25845164	.	CCT	C	7124.45	PASS	AB=1.000;AC=44;AF=0.846;AN=52;BaseQRankSum=7.257;DP=355;FS=6.738;HRun=0;HaplotypeScore=126.4799;InbreedingCoeff=0.4067;MQ=79.54;MQ0=0;MQRankSum=-6.746;QD=22.13;ReadPosRankSum=5.730;VQSLOD=5.1826;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:20,0:20:48.26:76,0,48	1/1:7,0:7:17.93:176,18,0	0/0:19,0:19:43.55:0,44,647	0/0:13,0:13:25.93:0,26,355	1/1:15,1:16:27.55:319,28,0	1/1:17,0:17:39.07:415,39,0	1/1:11,1:12:30:322,30,0	0/1:17,0:16:2.62:85,0,3	1/1:11,0:11:30.09:346,30,0	1/1:20,0:19:48.05:538,48,0	1/1:12,0:12:27.08:310,27,0	1/1:13,0:13:36.09:401,36,0	1/1:10,0:11:24.03:258,24,0	1/1:6,0:6:15.04:168,15,0	0/1:12,0:12:45:105,0,45	1/1:13,0:13:32.93:360,33,0	0/1:7,0:7:22.88:23,0,23	./.	1/1:12,0:12:21.48:229,21,0	1/1:17,0:17:45.05:493,45,0	1/1:9,0:9:9.01:94,9,0	1/1:8,1:9:24.07:284,24,0	1/1:22,0:22:42.12:484,42,0	1/1:5,0:5:5.69:65,6,0	1/1:14,0:14:39.12:452,39,0	1/1:22,1:23:60.06:678,60,0	1/1:17,0:17:42.01:442,42,0	./.
chr10	25845165	.	CT	C	6279.75	PASS	AB=1.000;AC=49;AF=0.942;AN=52;BaseQRankSum=6.080;DP=330;FS=1.759;HRun=1;HaplotypeScore=125.6706;InbreedingCoeff=0.6080;MQ=80.74;MQ0=0;MQRankSum=-7.802;QD=20.13;ReadPosRankSum=4.099;VQSLOD=5.2715;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,1:20:18.49:168,18,0	1/1:1,5:6:17.79:148,18,0	0/0:18,0:18:37.62:0,38,483	0/1:13,0:13:7.37:7,0,244	1/1:7,9:16:27.51:259,28,0	1/1:3,11:14:38.99:356,39,0	1/1:4,6:11:29.96:268,30,0	1/1:15,1:15:12.92:102,13,0	1/1:0,10:10:30.04:287,30,0	1/1:0,17:18:47.95:448,48,0	1/1:1,10:11:27.51:256,28,0	1/1:1,11:12:36.04:336,36,0	1/1:1,7:11:23.86:211,24,0	1/1:0,5:5:15.01:138,15,0	1/1:12,0:12:23.20:166,23,0	1/1:0,12:12:32.92:301,33,0	1/1:6,1:7:16.03:114,16,0	./.	1/1:3,6:9:21.46:197,21,0	1/1:1,16:17:44.99:416,45,0	1/1:1,5:6:8.73:81,9,0	1/1:2,7:9:23.98:225,24,0	1/1:0,19:21:42.06:401,42,0	1/1:1,3:4:5.99:54,6,0	1/1:1,12:14:42.07:405,42,0	1/1:5,16:21:59.97:561,60,0	1/1:1,13:17:41.84:373,42,0	./.
chr10	25845167	.	CCCCTT	C	10162.42	PASS	AB=1.000;AC=43;AF=0.827;AN=52;BaseQRankSum=7.757;DP=327;FS=6.779;HRun=0;HaplotypeScore=131.1666;InbreedingCoeff=0.6069;MQ=78.52;MQ0=0;MQRankSum=-6.209;QD=35.66;ReadPosRankSum=7.092;VQSLOD=4.0460;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:18,0:18:99:100,0,221	1/1:1,5:6:18.06:270,18,0	0/0:15,0:16:43.70:0,44,1175	0/0:13,0:13:35.83:0,36,703	1/1:6,9:15:30.03:472,30,0	1/1:5,10:15:42.03:604,42,0	1/1:6,5:11:33.04:496,33,0	0/1:13,0:12:46.61:47,0,64	1/1:1,10:11:33.07:520,33,0	1/1:2,17:19:51.16:813,51,0	1/1:2,10:12:30.02:468,30,0	1/1:2,11:13:39.04:586,39,0	1/1:4,7:11:24.08:383,24,0	1/1:0,5:5:15.05:246,15,0	0/0:12,0:12:15.82:0,16,358	1/1:0,12:12:33.11:533,33,0	0/1:7,0:7:2.24:2,0,218	./.	1/1:3,6:9:27.02:389,27,0	1/1:0,16:16:42.01:666,42,0	1/1:1,5:6:6.02:100,6,0	1/1:4,7:11:24.08:401,24,0	1/1:3,18:21:41.94:701,42,0	1/1:1,3:4:5.44:96,5,0	1/1:2,12:14:42.14:699,42,0	1/1:5,15:20:57.19:945,57,0	1/1:3,13:16:39.13:626,39,0	./.
chr10	25845168	.	CCCTT	C	9782.73	PASS	AB=1.000;AC=44;AF=0.846;AN=52;BaseQRankSum=8.710;DP=331;FS=14.063;HRun=0;HaplotypeScore=126.9041;InbreedingCoeff=0.3690;MQ=77.10;MQ0=0;MQRankSum=-7.040;QD=32.39;ReadPosRankSum=6.579;VQSLOD=3.7862;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:18,0:18:99:113,0,138	1/1:6,0:6:18.06:256,18,0	0/0:16,0:16:42.14:0,42,1059	0/0:12,0:12:27.56:0,28,604	1/1:15,0:16:30.03:454,30,0	1/1:14,1:15:42.04:577,42,0	1/1:9,1:11:33:476,33,0	0/1:12,0:11:27.35:49,0,27	1/1:11,0:11:33.07:495,33,0	1/1:20,0:19:54.08:784,54,0	1/1:13,0:13:30.02:442,30,0	1/1:13,0:13:39.04:557,39,0	1/1:11,0:11:24.08:359,24,0	1/1:5,0:5:15.05:232,15,0	0/1:12,0:12:24.88:25,0,165	1/1:12,0:12:33.11:509,33,0	0/1:7,0:7:36.58:37,0,131	./.	1/1:9,0:9:27.01:371,27,0	1/1:18,0:18:41.88:631,42,0	1/1:6,0:6:6.02:95,6,0	1/1:10,0:11:24.08:380,24,0	1/1:20,1:21:41.94:665,42,0	1/1:4,0:4:5.41:90,5,0	1/1:14,0:14:42.14:666,42,0	1/1:19,1:21:60.18:927,60,0	1/1:16,0:16:39.13:594,39,0	./.
chr10	25845170	.	CTT	C	8362.35	PASS	AC=48;AF=0.923;AN=52;BaseQRankSum=5.663;DP=323;FS=0.000;HRun=2;HaplotypeScore=119.9922;InbreedingCoeff=0.7951;MQ=77.43;MQ0=0;MQRankSum=-7.773;QD=28.35;ReadPosRankSum=3.665;VQSLOD=4.4605;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,6:16:14.29:166,14,0	1/1:5,1:6:18:204,18,0	0/0:16,0:16:44.12:0,44,756	0/0:11,0:11:11.86:0,12,374	1/1:10,6:16:30.03:357,30,0	1/1:16,0:16:45.06:523,45,0	1/1:8,5:13:33.10:410,33,0	1/1:0,9:9:8.93:85,9,0	1/1:11,0:11:33.06:391,33,0	1/1:20,0:19:53.65:647,54,0	1/1:10,3:13:30.03:349,30,0	1/1:14,0:14:42.02:488,42,0	1/1:11,0:11:24.03:276,24,0	1/1:6,0:6:18.06:225,18,0	1/1:7,3:10:18.05:243,18,0	1/1:13,0:13:36.11:459,36,0	1/1:1,2:3:6.02:69,6,0	./.	1/1:6,3:9:27.05:338,27,0	1/1:16,2:18:40.68:487,41,0	1/1:6,0:6:6.02:74,6,0	1/1:8,2:10:21.07:272,21,0	1/1:21,0:21:41.97:519,42,0	1/1:3,1:4:5.69:70,6,0	1/1:14,0:14:42.13:531,42,0	1/1:18,2:20:57.16:708,57,0	1/1:16,0:16:39.10:471,39,0	./.
chr10	25845272	.	T	TTGTGTGTGTG	20381.32	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=1.757;DP=507;FS=1.883;HRun=0;HaplotypeScore=230.1538;InbreedingCoeff=0.7443;MQ=46.66;MQ0=2;MQRankSum=-4.530;QD=46.53;ReadPosRankSum=4.253;VQSLOD=4.6396;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:22:6.73:101,7,0	1/1:8,4:12:11.60:482,12,0	0/0:25,0:18:39.03:0,39,836	0/0:29,0:20:17.49:0,17,641	1/1:16,4:21:14.34:189,14,0	1/1:7,6:13:24.07:635,24,0	1/1:8,1:9:11.69:158,12,0	1/1:21,0:18:30.10:1042,30,0	1/1:9,1:10:14.98:492,15,0	1/1:14,0:16:27.09:748,27,0	1/1:13,10:23:15.05:705,15,0	1/1:7,6:14:18.03:661,18,0	1/1:5,11:16:15.05:693,15,0	1/1:14,1:15:15.03:464,15,0	1/1:18,0:20:30:713,30,0	1/1:7,8:15:33.11:1474,33,0	1/1:12,4:17:30.08:1114,30,0	1/1:4,1:5:12.04:587,12,0	1/1:8,2:10:24.07:675,24,0	1/1:14,15:29:31.84:1289,32,0	0/0:14,1:15:0.47:0,0,1	1/1:13,7:21:22.55:978,23,0	1/1:17,13:31:29.81:1191,30,0	1/1:6,3:10:6.02:199,6,0	1/1:15,8:23:30.08:1168,30,0	1/1:21,13:36:87.20:3117,87,0	1/1:19,6:25:30.10:1374,30,0	1/1:3,1:4:4.05:136,4,0
chr10	25845284	.	GTA	G	771.82	PASS	AB=0.898;AC=20;AF=0.357;AN=56;BaseQRankSum=-3.754;DP=523;FS=4.187;HRun=0;HaplotypeScore=223.5960;InbreedingCoeff=-0.4285;MQ=40.81;MQ0=5;MQRankSum=3.626;QD=2.10;ReadPosRankSum=-0.122;VQSLOD=1.8627;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:24:20.13:20,0,61	0/0:9,2:11:12.88:0,13,108	0/0:26,0:16:42.07:0,42,718	0/0:31,0:18:27.11:0,27,658	0/1:19,2:21:50.73:51,0,59	0/1:16,0:16:26.48:111,0,26	0/0:9,1:10:11.67:0,12,139	0/0:18,4:19:5.63:0,6,525	1/1:6,3:9:0.44:39,0,0	0/1:10,5:15:99:110,0,99	0/1:20,2:22:0.41:0,0,126	0/1:14,1:15:3.89:4,0,109	0/0:14,0:14:15.11:0,15,96	0/1:12,5:17:3.96:4,0,28	0/1:18,3:21:69.99:100,0,70	0/0:17,1:18:12.44:0,12,171	0/1:16,1:17:69.43:74,0,69	0/1:3,1:4:13.42:13,0,98	0/1:15,2:15:65.09:65,0,167	0/1:32,2:34:14.95:15,0,335	0/0:17,0:17:20.12:0,20,121	0/1:17,4:21:31.61:32,0,109	0/1:27,2:29:37.88:38,0,141	0/1:11,0:11:17.97:18,0,18	0/1:21,3:23:36.89:37,0,184	0/1:28,6:34:99:168,0,370	0/1:15,2:17:23.11:23,0,185	0/0:6,0:6:5.34:0,5,62
chr10	25845292	.	GTA	G	431.47	PASS	AB=0.888;AC=15;AF=0.268;AN=56;BaseQRankSum=-1.883;DP=536;FS=4.904;HRun=0;HaplotypeScore=226.4069;InbreedingCoeff=-0.3239;MQ=39.54;MQ0=7;MQRankSum=0.434;QD=1.51;ReadPosRankSum=-1.161;VQSLOD=2.3668;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:6.30:0,6,88	0/0:11,2:13:15.89:0,16,211	0/0:24,0:13:39.08:0,39,640	0/0:28,0:17:44.95:0,45,731	0/1:16,2:18:7.65:8,0,140	0/1:17,0:17:51.87:89,0,52	0/0:12,1:13:13.80:0,14,206	0/0:20,4:21:18.12:0,18,800	0/1:6,3:9:0.90:1,0,6	0/1:11,5:16:74.97:75,0,221	0/1:21,2:23:0.30:0,0,207	0/0:13,1:14:18.11:0,18,200	0/0:14,0:14:15.13:0,15,131	0/1:12,5:17:4.71:5,0,43	0/1:18,1:19:55.95:56,0,96	0/0:18,1:19:12.87:0,13,270	0/1:17,1:18:51.86:52,0,171	0/1:5,1:6:13.26:13,0,116	0/1:15,2:15:50.57:51,0,454	0/0:30,2:32:49.08:0,49,601	0/0:19,0:19:20.19:0,20,233	0/1:20,4:24:3.61:4,0,228	0/1:31,2:33:33.19:33,0,305	0/1:12,0:12:16.16:16,0,52	0/0:18,3:20:8.28:0,8,345	0/1:31,6:37:99:149,0,658	0/1:17,2:19:22.29:22,0,334	0/0:5,0:5:0.37:0,0,83
chr10	25845308	.	A	ATGTG	7827.94	PASS	AB=0.610;AC=51;AF=0.911;AN=56;BaseQRankSum=-0.217;DP=605;FS=5.088;HRun=0;HaplotypeScore=210.4127;InbreedingCoeff=0.5401;MQ=44.22;MQ0=4;MQRankSum=-2.682;QD=14.13;ReadPosRankSum=3.176;VQSLOD=4.2007;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:13,1:36:0:0,0,0	1/1:6,10:16:15.61:260,16,0	0/0:25,0:15:17.20:0,17,272	0/0:26,0:18:29.18:0,29,476	1/1:6,12:18:9.03:225,9,0	1/1:5,8:13:6.02:149,6,0	1/1:4,14:19:11.16:298,11,0	1/1:16,1:24:29.87:368,30,0	1/1:4,11:16:3.01:72,3,0	1/1:8,11:22:39.02:697,39,0	1/1:12,12:25:15.05:372,15,0	1/1:5,9:15:9.03:224,9,0	1/1:9,5:14:8.15:156,8,0	1/1:7,8:17:2.82:74,3,0	1/1:5,1:18:1.52:50,2,0	1/1:5,15:22:16.61:377,17,0	1/1:10,1:29:9.96:153,10,0	1/1:2,4:6:6.02:149,6,0	1/1:10,10:19:29.95:448,30,0	1/1:9,25:35:38.74:853,39,0	1/1:4,17:27:12.04:300,12,0	1/1:8,18:26:15.05:372,15,0	1/1:11,19:33:19.82:458,20,0	1/1:3,14:17:2.69:75,3,0	1/1:7,17:26:23.55:481,24,0	1/1:19,13:32:30.08:677,30,0	1/1:9,11:20:15.02:373,15,0	1/1:6,0:6:8.76:166,9,0
chr10	25845409	.	TG	T	13590.39	PASS	AC=42;AF=0.778;AN=54;BaseQRankSum=13.005;DP=563;FS=0.739;HRun=3;HaplotypeScore=95.1375;InbreedingCoeff=0.9995;MQ=81.16;MQ0=0;MQRankSum=-1.533;QD=33.15;ReadPosRankSum=3.649;VQSLOD=5.0432;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,117,1645	1/1:0,13:13:33.10:409,33,0	0/0:17,0:17:48.12:0,48,636	0/0:21,0:21:49.83:0,50,701	1/1:0,16:16:48.15:594,48,0	1/1:0,18:18:51.16:632,51,0	1/1:0,18:18:54.17:669,54,0	0/0:28,0:28:78.25:0,78,1090	1/1:1,10:11:27.08:334,27,0	1/1:2,21:23:66.14:775,66,0	1/1:0,20:20:51.04:632,51,0	1/1:0,11:11:27.08:334,27,0	1/1:0,17:17:48.15:594,48,0	1/1:1,19:20:48.15:595,48,0	0/0:22,0:22:63.15:0,63,850	1/1:1,21:22:54.17:669,54,0	0/0:23,0:23:63.17:0,63,876	1/1:0,12:12:36.11:445,36,0	1/1:0,15:15:45.12:542,45,0	1/1:0,26:26:66.12:783,66,0	1/1:1,35:36:96.30:1190,96,0	1/1:0,20:20:60.08:707,60,0	1/1:0,20:20:57.18:706,57,0	1/1:0,24:24:63.20:781,63,0	1/1:0,14:14:39.12:483,39,0	1/1:1,29:30:87.21:1047,87,0	1/1:3,21:24:54.17:669,54,0	./.
chr10	25845706	.	A	ATT	18820.81	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-5.470;DP=539;FS=10.518;HRun=7;HaplotypeScore=61.1969;InbreedingCoeff=0.9890;MQ=81.74;MQ0=0;MQRankSum=-4.317;QD=40.04;ReadPosRankSum=4.016;VQSLOD=3.6304;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:51.14:0,51,594	1/1:0,12:12:30.10:492,30,0	0/0:16,0:16:36.09:0,36,417	0/0:14,0:14:15.88:0,16,267	1/1:3,23:29:75.21:1161,75,0	1/1:2,26:28:63.22:1034,63,0	1/1:3,15:18:33.11:532,33,0	1/1:7,35:43:99:1587,105,0	1/1:2,19:22:53.67:845,54,0	1/1:2,22:24:63.19:986,63,0	1/1:1,23:24:66.23:1083,66,0	1/1:2,13:16:45.11:706,45,0	1/1:0,12:13:36.12:589,36,0	1/1:3,10:13:30.10:491,30,0	0/0:20,0:20:60.18:0,60,699	1/1:0,13:13:36.12:591,36,0	1/1:2,17:20:44.64:698,45,0	1/1:1,11:12:30.10:492,30,0	1/1:1,16:18:51.14:787,51,0	1/1:2,24:26:72.25:1172,72,0	1/1:0,8:8:18.06:295,18,0	1/1:5,14:19:42.06:626,42,0	1/1:1,20:22:56.64:865,57,0	1/1:0,12:12:33.11:542,33,0	1/1:2,17:19:48.16:788,48,0	1/1:1,23:24:66.23:1078,66,0	1/1:3,27:29:69.24:1132,69,0	1/1:0,5:5:15.05:246,15,0
chr10	25847759	.	A	AT	960.96	PASS	AB=1.000;AC=6;AF=0.107;AN=56;BaseQRankSum=-2.735;DP=511;FS=1.264;HRun=0;HaplotypeScore=100.2781;InbreedingCoeff=0.7560;MQ=72.90;MQ0=0;MQRankSum=0.840;QD=12.99;ReadPosRankSum=-1.445;VQSLOD=3.9935;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:93.25:0,93,1239	0/0:7,0:7:20.79:0,21,160	0/1:15,0:11:0.32:0,0,99	0/1:8,0:7:0.49:0,0,17	0/0:18,0:18:50.09:0,50,461	0/0:27,0:27:71.05:0,71,474	0/0:13,0:13:20.80:0,21,161	1/1:5,25:30:60.61:626,61,0	0/0:15,0:15:32.75:0,33,284	0/0:23,0:23:67.37:0,67,595	0/0:16,0:16:44.32:0,44,327	0/0:12,0:12:28.39:0,28,242	0/0:10,0:10:17.47:0,17,109	0/0:24,0:24:59.40:0,59,458	0/0:22,0:22:16.36:0,16,34	0/0:18,0:18:38.22:0,38,297	1/1:3,18:21:29.53:455,30,0	0/0:14,0:14:38.19:0,38,284	0/0:23,0:23:65.16:0,65,574	0/0:22,0:22:61.82:0,62,464	0/0:9,0:9:20.64:0,21,133	0/0:17,0:17:45.59:0,46,374	0/0:15,0:15:34.91:0,35,229	0/0:24,0:24:62.92:0,63,498	0/0:15,0:15:34.40:0,34,245	0/0:26,0:26:75.60:0,76,614	0/0:31,0:31:70.56:0,71,464	0/0:5,0:5:14.66:0,15,91
chr10	25848528	.	T	TTTTGTTTG	29908.08	PASS	AB=0.941;AC=49;AF=0.875;AN=56;BaseQRankSum=-6.018;DP=671;FS=1.444;HRun=0;HaplotypeScore=173.1524;InbreedingCoeff=0.7906;MQ=57.93;MQ0=2;MQRankSum=-8.661;QD=52.01;ReadPosRankSum=-0.289;VQSLOD=4.2288;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:43:50.84:0,51,1281	1/1:4,2:6:12.04:430,12,0	0/0:32,0:29:21.04:0,21,480	0/0:19,0:14:8.31:0,8,256	1/1:17,12:30:42.14:1560,42,0	1/1:8,15:27:48.15:1815,48,0	1/1:13,6:22:24.08:843,24,0	1/1:35,0:35:33.10:730,33,0	1/1:16,11:29:36.12:1447,36,0	1/1:13,7:22:38.96:1184,39,0	1/1:18,13:32:51.17:1886,51,0	1/1:10,9:21:36.12:1485,36,0	1/1:10,5:15:24.03:882,24,0	1/1:12,6:21:27.09:971,27,0	1/1:12,11:24:42.14:1728,42,0	1/1:10,12:26:42.13:1559,42,0	1/1:15,11:29:42.14:1422,42,0	0/1:15,1:16:8.01:195,0,8	1/1:16,6:22:39.05:1082,39,0	1/1:18,12:33:51.17:1908,51,0	1/1:11,0:11:9.49:177,9,0	1/1:7,8:17:30.09:1021,30,0	1/1:13,10:24:37.94:1323,38,0	1/1:12,10:26:29.24:902,29,0	1/1:14,10:25:39.13:1514,39,0	1/1:15,7:26:42.07:1451,42,0	1/1:18,14:31:51.17:2042,51,0	1/1:2,2:4:9.03:353,9,0
chr10	25848534	.	TTG	T	1297.85	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=0.094;DP=696;FS=0.000;HRun=0;HaplotypeScore=195.9075;InbreedingCoeff=0.9543;MQ=52.86;MQ0=3;MQRankSum=3.600;QD=28.84;ReadPosRankSum=1.571;VQSLOD=4.1704;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,41:43:93.23:1393,93,0	0/0:6,0:6:15.05:0,15,236	0/0:33,0:28:81.20:0,81,1264	0/0:19,0:13:30.38:0,30,547	0/0:26,0:26:71.80:0,72,963	0/0:28,0:28:69.17:0,69,957	0/0:22,0:22:54.09:0,54,808	0/0:35,0:35:84.28:0,84,1462	0/0:29,0:29:75.19:0,75,1055	0/0:23,0:23:66.16:0,66,975	0/0:32,0:32:96.30:0,96,1388	0/0:23,0:23:63.20:0,63,921	0/0:14,0:14:42.12:0,42,545	0/0:24,0:24:60.18:0,60,907	0/0:27,0:28:81.22:0,81,1086	0/0:26,0:26:63.20:0,63,892	0/0:28,0:28:50.25:0,50,915	0/0:16,0:16:45.58:0,46,703	0/0:24,0:24:72.23:0,72,1123	0/0:38,0:38:99:0,114,1619	0/0:14,0:14:27.59:0,28,378	0/0:20,0:20:60.18:0,60,817	0/0:26,0:26:75.23:0,75,1125	0/0:28,0:28:42.51:0,43,680	0/0:25,0:25:72.22:0,72,1037	0/0:28,0:28:81.25:0,81,1271	0/0:32,0:31:96.30:0,96,1334	0/0:4,0:4:12.04:0,12,170
chr10	25849080	.	CT	C	8591.32	PASS	AB=0.779;AC=52;AF=0.929;AN=56;BaseQRankSum=-4.766;DP=562;FS=0.765;HRun=11;HaplotypeScore=71.2524;InbreedingCoeff=0.5015;MQ=83.20;MQ0=1;MQRankSum=-3.854;QD=15.65;ReadPosRankSum=4.179;VQSLOD=5.6100;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:24:38.47:112,38,0	1/1:2,7:9:20.96:172,21,0	0/1:25,4:28:19.14:19,0,276	0/0:13,0:11:17.99:0,18,169	1/1:3,17:20:18.65:344,19,0	1/1:2,23:26:70.94:572,71,0	1/1:4,12:16:35.94:296,36,0	1/1:7,0:37:62.02:182,62,0	1/1:2,20:22:56.93:468,57,0	1/1:2,12:14:35.96:296,36,0	1/1:5,20:26:37.70:442,38,0	1/1:4,11:16:34.97:277,35,0	1/1:3,21:25:49.97:400,50,0	1/1:2,15:19:43.01:332,43,0	1/1:1,0:14:20.37:59,20,0	1/1:4,19:24:50.93:419,51,0	1/1:3,0:15:20.36:59,20,0	1/1:2,14:17:15.02:319,15,0	0/1:10,9:19:2.04:192,0,2	1/1:1,25:26:68.32:540,68,0	1/1:3,10:13:32.64:257,33,0	1/1:2,16:18:41.88:339,42,0	1/1:2,15:17:38.95:320,39,0	1/1:2,17:19:18.96:362,19,0	1/1:0,26:26:74.91:616,75,0	1/1:3,17:20:50.88:412,51,0	1/1:4,27:32:80.88:662,81,0	1/1:0,6:6:14.98:123,15,0
chr10	25849089	.	TTTA	T	848.83	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-3.122;DP=556;FS=3.796;HRun=0;HaplotypeScore=120.8714;InbreedingCoeff=0.9875;MQ=79.98;MQ0=1;MQRankSum=-3.304;QD=35.37;ReadPosRankSum=-0.477;VQSLOD=3.9628;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,24:24:60.14:944,60,0	0/0:10,0:10:30.03:0,30,293	0/0:24,0:22:62.66:0,63,898	0/0:14,0:12:23.21:0,23,376	0/0:21,0:21:62.88:0,63,668	0/0:27,0:27:80.66:0,81,820	0/0:12,0:12:36.08:0,36,375	0/0:36,0:36:38.81:0,39,330	0/0:23,0:23:66.11:0,66,665	0/0:14,0:14:42.09:0,42,431	0/0:23,0:23:65.61:0,66,673	0/0:16,0:16:47.57:0,48,467	0/0:23,0:23:53.48:0,53,534	0/0:18,0:18:47.07:0,47,448	0/0:15,0:15:30.96:0,31,155	0/0:22,0:22:60.12:0,60,623	0/0:15,0:15:33.95:0,34,164	0/0:16,0:16:28.66:0,29,483	0/0:17,0:17:51.06:0,51,572	0/0:30,0:30:86.69:0,87,834	0/0:14,0:14:41.55:0,42,396	0/0:17,0:17:47.03:0,47,526	0/0:19,0:19:51.09:0,51,523	0/0:18,0:18:51.12:0,51,568	0/0:30,0:30:87.17:0,87,882	0/0:19,0:19:55.68:0,56,572	0/0:32,0:32:89.51:0,90,922	0/0:7,0:7:18.03:0,18,180
chr10	25849348	.	TTTAA	T	538.40	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.225;DP=591;FS=3.773;HRun=0;HaplotypeScore=96.9470;InbreedingCoeff=0.9698;MQ=87.55;MQ0=0;MQRankSum=-5.102;QD=23.41;ReadPosRankSum=-1.963;VQSLOD=3.1490;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,22:23:38.92:633,39,0	0/0:14,0:14:42.14:0,42,1143	0/0:21,0:21:57.16:0,57,1378	0/0:22,0:23:35.81:0,36,1016	0/0:34,0:34:99:0,102,2689	0/0:31,0:31:93.26:0,93,2277	0/0:14,0:14:42.14:0,42,1113	0/0:23,0:23:66.22:0,66,1728	0/0:16,0:16:45.15:0,45,1232	0/0:20,0:20:57.17:0,57,1383	0/0:26,0:26:75.25:0,75,1928	0/0:24,0:24:72.25:0,72,1957	0/0:21,0:21:63.21:0,63,1652	0/0:19,0:19:51.17:0,51,1319	0/0:13,0:13:39.13:0,39,1059	0/0:19,0:19:54.16:0,54,1362	0/0:21,0:21:63.20:0,63,1623	0/0:15,0:15:42.10:0,42,1087	0/0:15,0:15:42.14:0,42,1094	0/0:29,0:29:87.30:0,87,2377	0/0:25,0:25:72.25:0,72,1961	0/0:23,0:23:66.22:0,66,1746	0/0:27,0:27:78.27:0,78,2130	0/0:13,0:13:36.12:0,36,947	0/0:18,0:18:54.16:0,54,1346	0/0:27,0:27:81.27:0,81,2104	0/0:33,0:32:99:0,99,2593	0/0:4,0:4:12.04:0,12,328
chr10	25849461	.	AC	A	1497.63	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-7.853;DP=589;FS=2.957;HRun=1;HaplotypeScore=95.4801;InbreedingCoeff=0.9981;MQ=78.50;MQ0=0;MQRankSum=-3.192;QD=38.40;ReadPosRankSum=-2.863;VQSLOD=2.8934;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:69.24:0,69,1102	0/0:10,0:10:30.10:0,30,480	0/0:14,0:14:42.09:0,42,609	0/0:12,0:12:33.03:0,33,485	0/0:33,0:33:99:0,99,1558	0/0:29,0:29:87.30:0,87,1391	0/0:15,0:15:45.15:0,45,720	1/1:0,24:24:72.23:990,72,0	0/0:20,0:20:60.20:0,60,954	0/0:30,0:30:90.30:0,90,1421	0/0:27,0:27:81.27:0,81,1271	0/0:23,0:23:69.21:0,69,1078	0/0:21,0:21:63.21:0,63,1000	0/0:20,0:20:60.20:0,60,954	0/0:16,0:16:48.16:0,48,767	0/0:19,0:19:57.19:0,57,907	1/1:0,15:15:45.15:629,45,0	0/0:19,0:19:57.17:0,57,879	0/0:10,0:10:30.10:0,30,480	0/0:28,0:28:84.29:0,84,1343	0/0:11,0:11:33.11:0,33,528	0/0:23,0:23:69.22:0,69,1077	0/0:31,0:31:93.32:0,93,1480	0/0:21,0:21:63.21:0,63,999	0/0:24,0:24:72.22:0,72,1126	0/0:30,0:30:90.31:0,90,1436	0/0:32,0:32:96.33:0,96,1531	0/0:8,0:8:24.07:0,24,360
chr10	25853921	.	GTA	G	18806.91	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=6.236;DP=616;FS=0.000;HRun=0;HaplotypeScore=164.1163;InbreedingCoeff=0.9953;MQ=78.10;MQ0=2;MQRankSum=-7.506;QD=35.62;ReadPosRankSum=4.138;VQSLOD=6.2310;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:95.63:0,96,1845	1/1:0,9:9:18.06:275,18,0	0/0:19,0:18:51.16:0,51,927	0/0:31,0:29:50.38:0,50,1129	1/1:2,20:21:33.19:415,33,0	1/1:1,28:29:75.25:1144,75,0	1/1:1,26:27:63.21:962,63,0	1/1:1,31:33:93.29:1379,93,0	1/1:4,22:26:60.40:916,60,0	1/1:0,21:21:62.16:813,62,0	1/1:2,15:17:32.86:486,33,0	1/1:1,18:19:50.91:778,51,0	1/1:0,16:16:39.13:595,39,0	1/1:2,13:15:27.09:411,27,0	1/1:0,18:18:45.15:688,45,0	1/1:0,15:15:42.14:641,42,0	1/1:2,19:21:47.96:722,48,0	1/1:3,13:16:33.11:503,33,0	1/1:1,23:24:66.15:951,66,0	1/1:1,25:26:60.17:914,60,0	1/1:1,24:24:48.63:734,49,0	1/1:0,19:19:48:732,48,0	1/1:3,24:27:47.95:675,48,0	1/1:1,24:25:54.14:825,54,0	1/1:0,20:20:57.19:870,57,0	1/1:1,25:26:26.43:1051,26,0	1/1:1,23:24:63.18:961,63,0	1/1:0,8:8:24.08:364,24,0
chr10	25855164	.	TG	T	18553.66	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=7.056;DP=615;FS=4.134;HRun=3;HaplotypeScore=103.5352;InbreedingCoeff=0.9991;MQ=77.74;MQ0=0;MQRankSum=-7.349;QD=35.21;ReadPosRankSum=4.285;VQSLOD=4.8904;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,160,2284	1/1:0,13:13:39.12:483,39,0	0/0:11,0:11:30.10:0,30,417	0/0:23,0:23:46.68:0,47,725	1/1:0,32:32:93.29:1153,93,0	1/1:0,25:25:66.21:818,66,0	1/1:0,13:13:30.09:372,30,0	1/1:0,32:32:96.30:1188,96,0	1/1:0,16:16:45.14:558,45,0	1/1:1,31:32:93.29:1153,93,0	1/1:0,21:21:63.20:781,63,0	1/1:0,21:21:60.19:744,60,0	1/1:0,16:16:42.13:520,42,0	1/1:1,23:24:69.22:855,69,0	1/1:0,24:24:72.23:892,72,0	1/1:0,13:13:36.11:446,36,0	1/1:0,20:20:60.19:744,60,0	1/1:0,16:16:48.11:578,48,0	1/1:1,20:21:57.14:689,57,0	1/1:0,28:28:81.25:1002,81,0	1/1:0,25:25:66.21:818,66,0	1/1:0,15:15:45.14:558,45,0	1/1:0,21:21:60.19:743,60,0	1/1:0,11:11:27.08:335,27,0	1/1:0,29:29:81.25:1005,81,0	1/1:0,20:20:60.19:744,60,0	1/1:1,25:26:72.22:892,72,0	1/1:0,13:13:39.12:484,39,0
chr10	25855287	.	T	TAGCCTGG	47922.29	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-4.278;DP=646;FS=1.791;HRun=0;HaplotypeScore=151.9560;InbreedingCoeff=0.9625;MQ=67.81;MQ0=0;MQRankSum=-11.581;QD=81.50;ReadPosRankSum=1.543;VQSLOD=5.7183;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:72.25:0,72,1789	1/1:2,8:10:27.09:1051,27,0	0/0:15,0:15:39.12:0,39,912	0/0:18,0:18:50.20:0,50,1252	1/1:11,34:47:63.04:2263,63,0	1/1:6,18:25:63.13:2149,63,0	1/1:3,10:16:33.07:1121,33,0	1/1:19,16:39:99:3630,108,0	1/1:6,10:17:42.14:1530,42,0	1/1:10,28:41:99:4031,114,0	1/1:8,19:29:45.15:1726,45,0	1/1:4,15:20:54.19:2060,54,0	1/1:3,16:20:45.15:1731,45,0	1/1:5,21:28:69.24:2611,69,0	1/1:5,17:24:57.20:2173,57,0	1/1:4,8:16:36.12:1225,36,0	1/1:4,15:23:48.16:1757,48,0	1/1:4,5:10:24.08:944,24,0	1/1:12,9:21:54.18:1925,54,0	1/1:8,31:41:81.23:2996,81,0	1/1:0,4:5:9.03:318,9,0	1/1:3,16:19:45.15:1675,45,0	1/1:7,25:35:51.18:1932,51,0	1/1:5,10:15:15.05:565,15,0	1/1:2,15:17:45.11:1692,45,0	1/1:4,20:27:81.21:2910,81,0	1/1:8,29:37:93.28:3429,93,0	1/1:0,4:4:12.04:479,12,0
chr10	25855677	.	GT	G	15489.88	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=10.490;DP=692;FS=6.491;HRun=7;HaplotypeScore=108.8850;InbreedingCoeff=0.9868;MQ=75.96;MQ0=1;MQRankSum=-5.246;QD=26.57;ReadPosRankSum=4.645;VQSLOD=4.5027;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,153,1925	1/1:0,6:6:12.03:122,12,0	0/0:31,0:31:81.16:0,81,932	0/0:24,1:25:55.45:0,55,665	1/1:3,18:21:48.10:490,48,0	1/1:2,14:16:39.09:398,39,0	1/1:4,24:28:66.15:673,66,0	1/1:2,24:26:72.11:717,72,0	1/1:0,17:17:48.11:490,48,0	1/1:2,19:21:54.12:550,54,0	1/1:1,12:12:33.07:336,33,0	1/1:0,17:17:51.12:520,51,0	1/1:1,24:25:66.15:673,66,0	1/1:2,23:25:66.15:673,66,0	1/1:2,21:23:60.14:612,60,0	1/1:1,18:19:54.12:551,54,0	1/1:1,21:22:60.13:612,60,0	1/1:0,23:23:66.15:673,66,0	1/1:3,24:27:72.06:704,72,0	1/1:2,29:30:75.01:738,75,0	1/1:3,60:62:99:1714,168,0	1/1:3,23:26:66.12:664,66,0	1/1:2,11:13:24.05:245,24,0	1/1:0,27:27:81.18:826,81,0	1/1:2,21:23:54.12:550,54,0	1/1:1,24:25:69.15:704,69,0	1/1:0,35:35:99:1040,102,0	1/1:3,8:11:21.05:214,21,0
chr10	25855896	.	GTAAA	G	22219.23	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=6.435;DP=530;FS=2.995;HRun=0;HaplotypeScore=106.5411;InbreedingCoeff=0.9970;MQ=64.39;MQ0=0;MQRankSum=-4.931;QD=48.20;ReadPosRankSum=2.052;VQSLOD=5.7664;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,105,2683	1/1:0,8:8:21.07:406,21,0	0/0:20,0:20:50.96:0,51,1105	0/0:13,0:13:33.11:0,33,815	1/1:1,28:29:75.10:1348,75,0	1/1:0,17:17:48.16:929,48,0	1/1:0,17:17:42.14:790,42,0	1/1:1,28:27:78.19:1299,78,0	1/1:1,14:15:45.14:836,45,0	1/1:1,29:30:87.24:1548,87,0	1/1:2,8:10:30.10:564,30,0	1/1:1,11:12:36.11:643,36,0	1/1:0,17:17:42.14:793,42,0	1/1:2,15:17:42.08:773,42,0	1/1:0,17:17:39.13:755,39,0	1/1:5,11:16:45.04:730,45,0	1/1:1,19:20:39.13:754,39,0	1/1:5,13:18:42.14:775,42,0	1/1:2,14:16:42.08:694,42,0	1/1:0,27:27:78.20:1468,78,0	1/1:1,8:9:24.08:464,24,0	1/1:7,18:25:74.93:1219,75,0	1/1:8,11:19:47.90:877,48,0	1/1:1,9:10:26.75:488,27,0	1/1:1,24:25:60.20:1140,60,0	1/1:1,18:19:57.15:959,57,0	1/1:2,25:27:69.24:1312,69,0	1/1:3,9:12:36.12:656,36,0
chr10	25855982	.	AT	A	13317.23	PASS	AB=1.000;AC=45;AF=0.804;AN=56;BaseQRankSum=-0.466;DP=561;FS=1.810;HRun=4;HaplotypeScore=81.6064;InbreedingCoeff=0.8803;MQ=72.08;MQ0=0;MQRankSum=0.408;QD=28.95;ReadPosRankSum=3.050;VQSLOD=4.8709;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,123,1548	1/1:2,6:8:18.05:215,18,0	0/0:10,0:9:17.24:0,17,264	0/0:11,0:11:27.03:0,27,302	1/1:4,22:26:77.99:868,78,0	1/1:3,14:17:45.12:527,45,0	1/1:0,19:19:42.13:503,42,0	0/1:30,0:30:85.54:86,0,116	1/1:4,23:27:69.08:791,69,0	1/1:6,12:18:42.07:478,42,0	1/1:3,15:18:41.95:456,42,0	1/1:2,17:19:57.10:654,57,0	1/1:6,13:19:48.05:546,48,0	1/1:4,11:15:35.99:396,36,0	0/0:19,0:19:40.70:0,41,154	1/1:3,13:16:48.01:530,48,0	0/0:19,0:19:46.77:0,47,180	1/1:1,16:17:45.13:528,45,0	1/1:8,8:16:42.05:445,42,0	1/1:5,27:32:93.19:1066,93,0	1/1:0,7:7:21.06:252,21,0	1/1:4,32:36:98.94:1094,99,0	1/1:4,22:26:69.11:798,69,0	1/1:0,19:19:57.17:682,57,0	1/1:3,22:25:72.20:844,72,0	1/1:4,15:19:57.14:654,57,0	1/1:7,18:25:60.12:689,60,0	1/1:0,6:6:18.06:216,18,0
chr10	25856447	.	GAA	G	12594.70	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-6.397;DP=605;FS=5.761;HRun=12;HaplotypeScore=89.9558;InbreedingCoeff=0.9644;MQ=76.16;MQ0=3;MQRankSum=-1.730;QD=22.65;ReadPosRankSum=4.170;VQSLOD=4.6801;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:22:34.85:0,35,325	1/1:0,9:9:21.05:214,21,0	0/0:15,0:18:21.99:0,22,193	0/0:7,0:8:9.40:0,9,57	1/1:2,28:30:69.10:702,69,0	1/1:4,24:29:53.83:601,54,0	1/1:3,19:26:43.77:506,44,0	1/1:2,19:22:59.83:576,60,0	1/1:1,19:20:41.52:452,42,0	1/1:5,23:30:64.45:678,64,0	1/1:3,12:16:35.80:347,36,0	1/1:6,9:15:23.72:225,24,0	1/1:1,26:27:65.86:653,66,0	1/1:4,16:22:44.78:439,45,0	1/1:4,24:30:71.87:714,72,0	1/1:2,18:20:45.09:458,45,0	1/1:1,17:18:48.11:487,48,0	1/1:1,14:15:42.07:427,42,0	1/1:5,20:25:60.07:608,60,0	1/1:5,23:30:53.83:591,54,0	1/1:1,29:30:81.18:824,81,0	1/1:7,19:27:53.80:531,54,0	1/1:3,18:22:20.63:385,21,0	1/1:1,15:17:36.06:366,36,0	1/1:1,15:16:42.09:427,42,0	1/1:9,23:32:68.84:683,69,0	1/1:2,19:21:57.12:580,57,0	1/1:0,4:4:12.03:122,12,0
chr10	25858666	.	ACTT	A	829	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=1.331;DP=543;FS=4.966;HRun=0;HaplotypeScore=113.3488;InbreedingCoeff=0.9837;MQ=70.29;MQ0=4;MQRankSum=-4.533;QD=41.45;ReadPosRankSum=1.212;VQSLOD=5.1781;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,19:20:54.16:924,54,0	0/0:9,0:9:24.07:0,24,518	0/0:21,0:17:49:0,49,760	0/0:11,0:8:23.69:0,24,310	0/0:18,0:18:54.19:0,54,1287	0/0:16,0:16:48.13:0,48,525	0/0:17,0:17:48.11:0,48,1015	0/0:26,0:26:78.22:0,78,1570	0/0:24,0:24:69.20:0,69,1532	0/0:32,0:32:96.31:0,96,2277	0/0:20,0:20:60.19:0,60,1364	0/0:12,0:12:33.11:0,33,803	0/0:19,0:18:51.10:0,51,1021	0/0:6,0:6:18.05:0,18,391	0/0:9,0:9:24.05:0,24,492	0/0:21,0:21:54.14:0,54,1147	0/0:16,0:16:48.10:0,48,980	0/0:19,0:19:54.14:0,54,1265	0/0:30,0:29:84.24:0,84,1790	0/0:27,0:27:81.28:0,81,1954	0/0:18,0:18:54.17:0,54,1234	0/0:18,0:18:51.16:0,51,1179	0/0:27,0:27:75.23:0,75,1688	0/0:10,0:10:24.08:0,24,534	0/0:23,0:23:63.20:0,63,1455	0/0:24,0:24:72.23:0,72,1614	0/0:31,0:29:87.24:0,87,1979	0/0:19,0:19:51.18:0,51,1251
chr10	25858667	.	CT	C	414.57	PASS	AB=0.917;AC=5;AF=0.089;AN=56;BaseQRankSum=5.934;DP=546;FS=0.683;HRun=9;HaplotypeScore=94.8501;InbreedingCoeff=0.7856;MQ=70.23;MQ0=4;MQRankSum=-6.960;QD=8.82;ReadPosRankSum=2.556;VQSLOD=2.1191;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:20:30.95:93,31,0	0/0:8,0:8:18.05:0,18,208	0/0:21,0:17:41.67:0,42,421	0/1:10,1:8:9.46:9,0,129	0/0:18,0:18:51.15:0,51,588	1/1:1,15:16:48.03:439,48,0	0/0:17,0:17:39.12:0,39,449	0/0:26,0:26:60.10:0,60,658	0/0:23,1:24:32.73:0,33,630	0/0:31,0:31:90.25:0,90,1027	0/0:19,1:20:29.70:0,30,596	0/0:12,0:12:33.10:0,33,381	0/0:18,1:18:39.10:0,39,440	0/0:6,0:6:15.04:0,15,173	0/0:9,0:9:18.05:0,18,208	0/0:21,0:21:42.12:0,42,485	0/0:16,0:16:39.10:0,39,441	0/0:19,0:19:51.15:0,51,588	0/0:30,0:30:69.02:0,69,767	0/0:27,0:27:81.23:0,81,926	0/0:18,0:18:48.14:0,48,553	0/0:19,0:19:51.14:0,51,580	0/0:27,0:27:69.20:0,69,788	0/0:10,0:10:21.05:0,21,231	0/0:23,0:23:57.15:0,57,646	0/0:24,0:24:60.18:0,60,692	0/0:32,0:30:81.22:0,81,923	0/0:21,0:21:57.14:0,57,634
chr10	25858708	.	A	ATT	21954.37	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-5.779;DP=511;FS=10.088;HRun=4;HaplotypeScore=51.1999;InbreedingCoeff=0.9789;MQ=61.10;MQ0=2;MQRankSum=-3.239;QD=45.27;ReadPosRankSum=3.512;VQSLOD=3.1935;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,14:23:51.10:807,51,0	1/1:0,5:5:15.01:218,15,0	0/0:8,0:7:21.07:0,21,271	0/0:18,0:14:32.57:0,33,397	1/1:0,26:26:78.22:1355,78,0	1/1:3,12:15:36.12:609,36,0	1/1:4,15:19:42.14:755,42,0	1/1:2,27:30:87.22:1407,87,0	1/1:1,18:19:51.17:919,51,0	1/1:4,23:27:72.22:1231,72,0	1/1:0,14:15:42.14:757,42,0	1/1:1,12:14:30.10:534,30,0	1/1:2,12:13:26.97:486,27,0	1/1:1,9:10:27.09:486,27,0	1/1:0,6:6:15.05:270,15,0	1/1:2,18:20:45.15:811,45,0	1/1:1,12:13:33.11:594,33,0	1/1:1,16:17:45.15:809,45,0	1/1:4,19:23:57.19:994,57,0	1/1:3,26:29:78.22:1370,78,0	1/1:5,4:9:24.05:366,24,0	1/1:1,18:19:54.06:870,54,0	1/1:1,22:23:60.21:1065,60,0	1/1:0,13:13:36.12:648,36,0	1/1:0,26:26:66.23:1189,66,0	1/1:1,28:29:87.29:1512,87,0	1/1:2,24:24:69.24:1243,69,0	1/1:0,15:15:36.12:648,36,0
chr10	25858809	.	T	TCCC	7257.61	PASS	AB=0.512;AC=49;AF=0.875;AN=56;BaseQRankSum=-2.418;DP=403;FS=1.735;HRun=8;HaplotypeScore=73.6676;InbreedingCoeff=0.6104;MQ=68.89;MQ0=2;MQRankSum=-6.693;QD=21.10;ReadPosRankSum=2.354;VQSLOD=1.8843;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:19:28.97:299,29,0	1/1:3,7:10:3.01:60,3,0	0/0:27,0:19:31.86:0,32,386	0/0:26,0:22:53.14:0,53,650	1/1:8,4:13:21.02:259,21,0	1/1:9,3:13:28.30:370,28,0	1/1:7,11:21:17.74:285,18,0	1/1:7,7:14:17.97:202,18,0	0/0:1,5:6:0.47:0,0,1	1/1:3,6:10:17.98:182,18,0	1/1:8,1:10:23.98:293,24,0	1/1:10,2:13:28.26:358,28,0	1/1:3,9:13:9.01:121,9,0	1/1:6,1:7:21.04:322,21,0	0/1:1,0:22:11.50:26,0,11	1/1:3,10:14:12.04:241,12,0	1/1:10,6:18:42.04:649,42,0	1/1:6,2:9:26.03:309,26,0	1/1:12,4:16:40.87:578,41,0	1/1:6,1:13:14.92:146,15,0	1/1:2,14:16:15:261,15,0	1/1:6,5:11:9.03:161,9,0	1/1:3,7:13:17.99:250,18,0	1/1:9,8:18:39.06:641,39,0	1/1:6,2:8:18:283,18,0	1/1:8,2:10:11.98:133,12,0	1/1:7,8:27:51.03:769,51,0	1/1:1,1:2:3.01:61,3,0
chr10	25859301	.	A	AT	11223.76	PASS	AB=0.817;AC=50;AF=0.893;AN=56;BaseQRankSum=-6.594;DP=577;FS=0.562;HRun=9;HaplotypeScore=73.8806;InbreedingCoeff=0.6703;MQ=56.03;MQ0=11;MQRankSum=1.777;QD=22.05;ReadPosRankSum=4.640;VQSLOD=5.4164;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:59.96:0,60,520	1/1:2,8:10:21.06:232,21,0	0/0:36,0:14:27.26:0,27,195	0/1:18,0:10:2.13:2,0,145	1/1:1,23:24:63.10:671,63,0	1/1:7,16:23:19.12:426,19,0	1/1:2,21:23:28.19:526,28,0	1/1:12,18:30:33.75:551,34,0	1/1:3,20:23:54.03:558,54,0	1/1:5,24:28:43.15:683,43,0	1/1:6,20:26:34.02:578,34,0	1/1:0,7:7:18.05:199,18,0	1/1:3,13:17:19.19:420,19,0	1/1:4,14:18:42.08:452,42,0	1/1:1,20:21:54.15:597,54,0	1/1:7,12:20:12.83:327,13,0	1/1:1,9:10:24.06:265,24,0	1/1:3,15:18:42.11:465,42,0	1/1:5,20:24:36.23:585,36,0	1/1:3,14:17:16.01:392,16,0	1/1:3,16:19:16.06:405,16,0	1/1:3,13:16:36.10:398,36,0	1/1:5,17:22:27.93:484,28,0	1/1:2,13:15:36.10:398,36,0	0/1:8,11:19:7.05:359,0,7	1/1:6,24:30:49.12:737,49,0	1/1:8,14:23:47.84:482,48,0	1/1:3,1:3:3.01:33,3,0
chr10	25860241	.	CT	C	741.66	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-0.472;DP=372;FS=11.594;HRun=8;HaplotypeScore=79.7565;InbreedingCoeff=0.8190;MQ=65.80;MQ0=12;MQRankSum=-0.693;QD=17.66;ReadPosRankSum=-2.272;VQSLOD=2.0700;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:48.15:0,48,577	0/0:5,0:5:9.03:0,9,108	0/0:42,0:11:17.71:0,18,193	0/0:24,1:7:5.21:0,5,32	0/0:12,0:12:33.10:0,33,399	0/0:13,0:13:39.08:0,39,454	0/0:5,0:5:12.04:0,12,145	1/1:8,19:27:57.07:545,57,0	0/0:7,0:7:18.06:0,18,217	0/0:8,0:8:24.06:0,24,278	0/0:11,0:11:30.09:0,30,362	0/0:3,0:3:9.03:0,9,109	0/0:14,0:14:36.10:0,36,425	0/0:11,0:11:30.09:0,30,362	0/0:12,0:12:30.08:0,30,351	0/0:8,0:8:24.07:0,24,289	1/1:2,13:15:33.05:318,33,0	0/0:10,0:10:27.07:0,27,314	0/0:8,0:8:7.31:0,7,204	0/0:22,0:22:60.17:0,60,714	0/0:7,0:7:18.06:0,18,217	0/0:5,0:5:15.05:0,15,181	0/0:18,0:18:48.15:0,48,579	0/0:7,0:7:15.05:0,15,180	0/0:10,0:10:30.08:0,30,353	0/0:19,0:19:48.14:0,48,571	0/0:15,0:15:36.11:0,36,432	0/0:14,0:13:36.11:0,36,434
chr10	25865701	.	TAA	T	169	PASS	AC=10;AF=0.714;AN=14;BaseQRankSum=-1.134;DP=30;FS=3.090;HRun=11;HaplotypeScore=16.9940;MQ=52.42;MQ0=7;MQRankSum=0.000;QD=12.07;ReadPosRankSum=-0.289;VQSLOD=-0.2278;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:7,0:3:6.02:0,6,87	0/0:4,0:2:6.02:0,6,76	./.	./.	./.	./.	1/1:0,2:2:3.01:32,3,0	1/1:3,2:3:6.02:64,6,0	1/1:1,2:2:6.02:64,6,0	./.	./.	./.	./.	1/1:0,2:2:3.01:32,3,0	1/1:0,2:2:6.02:64,6,0	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.
chr10	25868922	.	AT	A	10931.16	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=1.827;DP=556;FS=2.837;HRun=8;HaplotypeScore=100.5482;InbreedingCoeff=0.8558;MQ=62.39;MQ0=2;MQRankSum=0.630;QD=22.54;ReadPosRankSum=3.049;VQSLOD=4.9526;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:81.15:0,81,934	1/1:0,6:6:18.03:174,18,0	0/0:21,0:17:0.66:0,1,271	0/0:20,0:12:6.12:0,6,194	1/1:3,34:37:90.14:869,90,0	1/1:2,18:20:39.06:377,39,0	1/1:2,11:13:27.04:261,27,0	1/1:5,17:22:51.08:492,51,0	1/1:1,17:18:45.05:427,45,0	1/1:5,21:26:63.10:608,63,0	1/1:1,16:17:45.07:434,45,0	1/1:2,15:17:36.05:347,36,0	1/1:1,19:20:39.06:377,39,0	1/1:2,27:29:75.11:724,75,0	1/1:3,9:12:21.03:202,21,0	1/1:4,14:18:42.06:406,42,0	1/1:4,21:25:32.20:471,32,0	1/1:3,15:18:36.05:347,36,0	1/1:1,18:17:48.05:457,48,0	1/1:1,20:21:57.09:550,57,0	1/1:2,11:13:33.04:313,33,0	1/1:5,24:29:63.09:608,63,0	1/1:5,22:27:66.10:636,66,0	1/1:1,10:11:21.03:203,21,0	1/1:1,20:21:57.09:550,57,0	1/1:3,16:18:45.07:435,45,0	1/1:3,17:20:47.98:463,48,0	1/1:0,7:7:21.03:203,21,0
chr10	25873352	.	GA	G	20677.18	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=10.461;DP=687;FS=4.956;HRun=1;HaplotypeScore=73.8706;InbreedingCoeff=0.9968;MQ=85.04;MQ0=0;MQRankSum=-6.726;QD=39.99;ReadPosRankSum=4.580;VQSLOD=5.5018;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,120,1918	1/1:0,14:14:42.14:587,42,0	0/0:31,0:31:80.02:0,80,1197	0/0:22,0:21:59.68:0,60,891	1/1:1,33:34:96.29:1323,96,0	1/1:0,29:29:87.29:1217,87,0	1/1:0,18:18:48.16:671,48,0	0/0:30,0:30:87.29:0,87,1369	1/1:0,30:30:87.29:1217,87,0	1/1:0,36:36:99:1448,105,0	1/1:0,21:21:63.21:881,63,0	1/1:0,21:21:54.18:755,54,0	1/1:0,26:26:72.24:1007,72,0	1/1:0,19:19:57.19:797,57,0	0/0:25,0:25:72.25:0,72,1149	1/1:0,29:29:81.27:1133,81,0	0/0:22,0:22:66.21:0,66,1032	1/1:0,12:12:36.12:503,36,0	1/1:0,22:22:66.22:922,66,0	1/1:0,28:28:78.26:1090,78,0	1/1:0,30:30:87.29:1217,87,0	1/1:0,19:19:54.18:755,54,0	1/1:1,20:21:60.20:831,60,0	1/1:0,26:26:78.26:1091,78,0	1/1:0,20:20:57.19:797,57,0	1/1:0,23:23:69.23:965,69,0	1/1:0,34:34:90.11:1258,90,0	1/1:0,5:5:15.05:210,15,0
chr10	25874958	.	GGA	G	361.37	PASS	AB=0.982;AC=17;AF=0.340;AN=50;BaseQRankSum=-3.540;DP=259;FS=17.719;HRun=0;HaplotypeScore=63.9642;InbreedingCoeff=-0.1857;MQ=32.22;MQ0=41;MQRankSum=2.091;QD=2.26;ReadPosRankSum=-2.396;VQSLOD=-0.2730;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:17:6.17:6,0,29	0/1:5,0:5:6.92:7,0,67	./.	./.	1/1:6,0:6:2.91:23,3,0	0/0:8,0:5:12:0,12,120	0/1:10,0:7:26.02:26,0,164	0/0:15,0:13:32.74:0,33,299	./.	0/1:7,1:7:43.61:44,0,71	0/0:8,0:5:8.99:0,9,92	0/0:12,0:9:15.32:0,15,146	0/1:6,0:4:13.90:14,0,40	0/0:9,0:7:8.50:0,8,106	0/0:8,0:7:15.05:0,15,212	0/0:6,0:6:11.29:0,11,129	0/1:24,0:22:72.42:72,0,470	0/1:12,0:8:31.67:39,0,32	0/1:4,0:3:11.92:12,0,38	0/1:8,0:5:0.99:1,0,79	0/0:7,1:4:1.36:0,1,3	0/0:9,0:7:10.23:0,10,85	0/1:9,0:8:6.91:7,0,142	0/0:11,1:10:9.32:0,9,92	1/1:12,0:9:11.13:117,11,0	0/1:6,1:5:36.11:66,0,36	0/1:7,0:5:20.21:20,0,102	0/1:13,0:12:52.49:52,0,325
chr10	25874969	.	AAGAAGGAGGAGG	A	218.72	PASS	AB=1.000;AC=4;AF=0.074;AN=54;BaseQRankSum=2.122;DP=244;FS=3.545;HRun=0;HaplotypeScore=80.4979;InbreedingCoeff=0.3653;MQ=30.06;MQ0=41;MQRankSum=-1.180;QD=5.61;ReadPosRankSum=0.119;VQSLOD=1.6077;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:14,14:17:14.81:221,15,0	0/0:4,0:4:8.94:0,9,81	./.	0/0:3,0:1:3.01:0,3,38	0/0:4,0:4:6.02:0,6,241	0/0:8,0:5:11.99:0,12,403	0/0:12,0:9:24.06:0,24,1037	0/0:21,0:16:21.51:0,22,382	0/0:4,0:2:3.01:0,3,40	0/0:9,0:7:15:0,15,419	0/0:11,0:8:21:0,21,749	0/0:10,0:7:17.47:0,17,515	0/0:6,0:4:11.99:0,12,346	0/0:8,0:7:15.05:0,15,484	0/0:7,0:6:15.05:0,15,631	0/0:6,0:6:13.29:0,13,594	0/0:20,0:18:35.75:0,36,1132	0/1:6,0:3:97.73:98,0,98	0/0:2,0:2:5.99:0,6,115	0/0:7,0:4:11.97:0,12,351	0/1:4,0:2:0:0,0,0	0/0:9,0:7:11.95:0,12,224	0/0:10,0:7:20.81:0,21,905	0/0:9,0:7:9.65:0,10,148	0/0:6,0:3:6.02:0,6,154	0/0:8,0:6:12.93:0,13,406	0/0:7,0:4:11.91:0,12,372	0/0:10,0:9:26.93:0,27,701
chr10	25875014	.	GGAGA	G	3013.58	PASS	AB=0.928;AC=23;AF=0.411;AN=56;BaseQRankSum=10.529;DP=439;FS=39.464;HRun=0;HaplotypeScore=129.1780;InbreedingCoeff=-0.5102;MQ=30.54;MQ0=32;MQRankSum=-3.683;QD=12.05;ReadPosRankSum=-0.362;VQSLOD=1.5672;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:23:0.64:0,1,680	0/1:8,0:8:67.40:170,0,67	0/0:49,0:9:27.01:0,27,559	0/0:60,0:6:14.60:0,15,248	0/1:10,2:12:99:190,0,168	0/1:19,2:17:99:309,0,172	0/0:12,0:11:9.18:0,9,609	0/0:17,0:11:27.04:0,27,653	0/1:8,0:5:61.61:77,0,62	0/1:18,0:14:99:184,0,342	0/1:16,1:11:99:153,0,343	0/1:9,0:6:33.40:33,0,261	0/1:10,0:6:50.91:51,0,240	0/1:12,1:10:99:164,0,181	0/1:10,0:10:6.65:7,0,278	0/1:10,1:10:99:179,0,308	0/0:18,0:17:16.27:0,16,793	1/1:4,4:8:0.15:36,0,0	0/1:5,0:4:43.56:44,0,219	0/1:12,1:11:99:183,0,270	1/1:7,0:6:7.84:59,8,0	0/1:10,1:9:19.58:133,0,20	0/1:16,2:15:99:199,0,352	0/0:6,0:4:0.45:0,0,34	0/1:11,5:11:99:259,0,100	0/1:9,2:8:99:180,0,148	0/1:11,1:12:88.46:255,0,88	0/1:9,3:12:99:305,0,151
chr10	25875017	.	GA	G	2332.30	PASS	AB=0.725;AC=24;AF=0.429;AN=56;BaseQRankSum=10.064;DP=424;FS=31.436;HRun=3;HaplotypeScore=117.5532;InbreedingCoeff=-0.3827;MQ=30.47;MQ0=27;MQRankSum=-2.802;QD=9.76;ReadPosRankSum=0.375;VQSLOD=-0.0250;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:22:18.55:0,19,461	0/1:2,6:8:24.70:154,0,25	0/0:51,0:9:27.08:0,27,363	0/0:59,1:6:11.63:0,12,158	0/1:7,5:12:81.08:151,0,81	0/1:13,7:16:89.82:225,0,90	0/0:10,1:10:21.07:0,21,299	0/0:13,0:10:24.04:0,24,323	0/1:3,4:5:28.66:58,0,29	0/1:10,6:13:99:150,0,175	0/1:10,7:11:99:145,0,128	0/1:6,1:6:13.46:13,0,143	0/1:3,6:6:56.82:57,0,106	0/1:8,5:10:75.01:116,0,75	0/0:9,0:9:16.66:0,17,189	0/1:6,5:10:99:133,0,145	0/0:15,0:14:11.14:0,11,374	0/1:8,0:8:17.03:22,0,17	0/1:4,1:4:22.68:23,0,117	0/1:8,5:11:99:148,0,101	1/1:3,4:6:4.83:45,5,0	1/1:7,3:9:11.06:113,11,0	0/1:14,4:15:99:172,0,150	1/1:4,1:3:0.47:1,0,0	0/1:12,4:11:19.86:167,0,20	0/1:6,5:8:68.25:123,0,68	0/1:5,7:12:16:236,0,16	0/1:6,5:11:56.03:244,0,56
chr10	25875019	.	AAGAGGAGGAGGAGGAG	A	6527.90	PASS	AB=0.963;AC=28;AF=0.500;AN=56;BaseQRankSum=9.498;DP=424;FS=34.191;HRun=0;HaplotypeScore=173.9657;InbreedingCoeff=-0.4689;MQ=30.48;MQ0=26;MQRankSum=-3.538;QD=22.67;ReadPosRankSum=0.869;VQSLOD=2.2901;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:22:42.08:42,0,1785	0/1:8,0:8:99:187,0,112	0/0:52,0:9:24.08:0,24,792	0/0:60,0:5:11.97:0,12,377	0/1:14,0:14:99:419,0,162	0/1:18,0:16:99:596,0,386	0/0:12,0:11:21.07:0,21,709	0/0:11,0:8:24.08:0,24,745	0/1:9,0:6:99:214,0,128	0/1:16,0:13:99:265,0,478	0/1:20,0:14:99:308,0,486	0/1:7,1:6:99:118,0,346	0/1:11,0:6:56.94:57,0,396	0/1:11,0:9:99:413,0,198	0/1:7,2:9:99:207,0,344	0/1:11,0:10:99:207,0,366	0/1:11,1:13:99:158,0,674	1/1:8,0:8:11.71:324,12,0	0/1:6,0:5:99:126,0,236	0/1:11,0:11:99:351,0,347	1/1:7,0:6:12.04:295,12,0	1/1:9,0:9:15.05:312,15,0	0/1:18,0:15:99:370,0,431	1/1:5,0:4:3.01:70,3,0	0/1:14,0:9:99:378,0,123	0/1:11,0:8:99:340,0,164	0/1:12,0:13:59.13:339,0,59	0/1:10,0:10:99:431,0,244
chr10	25875065	.	AAG	A	2476.74	PASS	AB=0.879;AC=27;AF=0.482;AN=56;BaseQRankSum=1.607;DP=680;FS=21.668;HRun=0;HaplotypeScore=170.1939;InbreedingCoeff=-0.4173;MQ=42.13;MQ0=40;MQRankSum=0.227;QD=6.52;ReadPosRankSum=4.505;VQSLOD=1.9034;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:28:66.23:0,66,1143	0/1:9,1:10:77.64:78,0,164	0/0:116,1:13:33.08:0,33,454	0/0:123,0:29:54.12:0,54,890	0/1:21,3:24:99:273,0,142	0/1:8,14:20:98.09:346,0,98	0/1:10,0:9:17.96:18,0,43	0/1:26,3:25:99:151,0,546	1/1:4,7:10:5.20:187,5,0	0/1:22,2:24:99:178,0,209	0/1:23,2:19:83.24:83,0,161	1/1:7,0:6:2.84:14,3,0	0/1:17,1:14:38.04:38,0,45	0/1:9,4:11:31.01:91,0,31	1/1:6,5:11:18.27:161,18,0	0/1:11,1:12:32.90:33,0,172	0/1:9,1:10:16.73:17,0,30	0/1:10,7:18:37.05:275,0,37	0/1:17,1:17:0.29:0,0,293	0/1:16,2:18:95.12:95,0,112	0/0:15,1:16:1.30:0,1,121	0/1:17,0:16:73.47:101,0,73	0/1:17,3:18:98.82:99,0,137	1/1:6,0:5:5.21:21,5,0	0/1:23,3:23:46.91:47,0,320	0/1:13,3:14:27.53:199,0,28	0/0:15,0:15:14.14:0,14,355	0/1:11,3:14:99:134,0,115
chr10	25875067	.	G	GAGAGA	13143.99	PASS	AB=0.741;AC=47;AF=0.839;AN=56;BaseQRankSum=2.134;DP=715;FS=29.308;HRun=0;HaplotypeScore=164.1773;InbreedingCoeff=0.5476;MQ=44.31;MQ0=40;MQRankSum=-3.517;QD=29.67;ReadPosRankSum=3.892;VQSLOD=2.4812;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:57.17:0,57,1013	1/1:7,4:12:18.06:374,18,0	0/0:118,0:15:21.05:0,21,296	0/0:122,0:30:46.28:0,46,696	1/1:10,16:29:54.14:1477,54,0	1/1:23,0:21:45.11:1081,45,0	0/1:4,5:10:16.83:164,0,17	1/1:29,0:25:32.98:558,33,0	1/1:10,1:10:27.09:721,27,0	0/1:12,12:25:9.42:816,0,9	1/1:14,11:21:26.96:576,27,0	1/1:3,4:8:3.01:86,3,0	1/1:10,8:15:12.04:260,12,0	1/1:8,6:12:15.02:363,15,0	0/1:10,1:11:7.66:532,0,8	1/1:6,6:12:20.97:409,21,0	1/1:5,5:10:11.98:216,12,0	1/1:18,0:19:19.13:671,19,0	1/1:16,3:20:15.05:385,15,0	1/1:9,10:20:33.02:715,33,0	1/1:3,13:18:17.80:119,18,0	1/1:8,9:18:27:488,27,0	1/1:10,10:18:24.08:690,24,0	1/1:1,5:6:6.02:173,6,0	1/1:16,10:23:18.02:451,18,0	1/1:9,7:15:36.12:894,36,0	1/1:10,6:16:12.01:240,12,0	1/1:7,9:16:27.09:686,27,0
chr10	25875747	.	C	CAGG	34765.51	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=4.278;DP=694;FS=11.723;HRun=0;HaplotypeScore=135.5983;InbreedingCoeff=0.9992;MQ=85.07;MQ0=0;MQRankSum=-7.810;QD=59.53;ReadPosRankSum=4.281;VQSLOD=5.6708;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:56:99:0,163,2702	1/1:1,13:14:39.13:899,39,0	0/0:29,0:30:83.85:0,84,1300	0/0:24,0:24:64.21:0,64,916	1/1:2,17:19:45.15:1035,45,0	1/1:2,18:20:54.19:1244,54,0	1/1:3,20:23:63.15:1355,63,0	1/1:8,15:24:69.18:1425,69,0	1/1:1,24:25:72.25:1657,72,0	1/1:6,33:39:99:2300,108,0	1/1:3,22:25:63.22:1450,63,0	1/1:3,20:24:60.16:1334,60,0	1/1:3,20:24:69.15:1490,69,0	1/1:0,17:18:48.16:1106,48,0	1/1:3,12:17:42.10:887,42,0	1/1:2,19:21:63.22:1452,63,0	1/1:4,33:37:87.26:1956,87,0	1/1:2,22:24:60.21:1383,60,0	1/1:3,12:16:48.15:1059,48,0	1/1:0,29:31:87.30:2004,87,0	1/1:4,14:18:36.12:829,36,0	1/1:3,28:33:81.28:1865,81,0	1/1:3,19:24:63.22:1433,63,0	1/1:1,23:25:66.23:1521,66,0	1/1:3,11:15:39.13:898,39,0	1/1:4,27:31:90.27:1984,90,0	1/1:5,21:27:72.09:1646,72,0	1/1:1,9:10:24.08:553,24,0
chr10	25876191	.	GA	G	6084.08	PASS	AB=0.746;AC=47;AF=0.839;AN=56;BaseQRankSum=-6.100;DP=550;FS=14.446;HRun=13;HaplotypeScore=70.5092;InbreedingCoeff=0.5606;MQ=68.53;MQ0=1;MQRankSum=-1.557;QD=13.08;ReadPosRankSum=5.025;VQSLOD=3.4999;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,32:35:83.47:612,83,0	1/1:0,8:8:20.84:149,21,0	0/1:9,2:11:21.84:22,0,142	0/1:8,2:9:19.69:20,0,90	1/1:7,17:24:18.49:299,18,0	1/1:7,21:28:56.65:416,57,0	1/1:3,10:13:23.86:175,24,0	0/0:12,0:29:50.24:0,50,274	1/1:4,17:21:12.56:255,13,0	1/1:2,7:10:22.91:159,23,0	1/1:2,10:13:31.85:224,32,0	1/1:3,20:23:15.60:277,16,0	1/1:4,12:17:31.65:221,32,0	1/1:3,16:19:33.25:241,33,0	0/0:5,0:20:28.41:0,28,142	1/1:4,21:25:47.70:350,48,0	0/0:13,0:36:47.01:0,47,260	1/1:3,20:23:50.68:372,51,0	1/1:2,8:11:12.45:161,12,0	1/1:3,16:19:15.31:262,15,0	1/1:9,15:23:9.51:233,10,0	1/1:4,14:18:36.63:265,37,0	1/1:4,15:20:22.58:288,23,0	1/1:2,17:20:13.15:329,13,0	1/1:7,14:21:26.70:191,27,0	1/1:7,14:23:3.24:247,3,0	1/1:8,13:22:31.44:224,31,0	0/1:1,5:6:6.28:92,0,6
chr10	25879447	.	GGA	G	13050.64	PASS	AB=1.000;AC=50;AF=0.893;AN=56;BaseQRankSum=-8.987;DP=424;FS=0.566;HRun=0;HaplotypeScore=59.7207;InbreedingCoeff=0.6338;MQ=79.13;MQ0=1;MQRankSum=-4.391;QD=33.64;ReadPosRankSum=5.889;VQSLOD=6.7178;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:11:23.94:191,24,0	1/1:0,10:10:27.09:395,27,0	0/0:17,0:17:34.76:0,35,516	0/0:19,0:17:29.05:0,29,381	1/1:0,25:25:75.21:1067,75,0	1/1:0,19:19:48.16:702,48,0	1/1:0,10:10:18.06:263,18,0	0/1:17,0:17:53.24:53,0,212	1/1:0,14:14:27.09:395,27,0	1/1:0,24:24:72.20:1017,72,0	1/1:0,16:16:45.11:631,45,0	1/1:0,17:17:45.15:658,45,0	1/1:0,15:15:36.12:525,36,0	1/1:0,15:15:39.13:569,39,0	1/1:13,0:13:12.54:62,13,0	1/1:0,10:10:20.63:305,21,0	0/1:18,0:18:8.90:9,0,302	1/1:0,14:14:39.13:570,39,0	1/1:0,19:19:57.17:795,57,0	1/1:0,23:23:69.23:991,69,0	1/1:0,4:4:12.04:176,12,0	1/1:0,17:17:45.15:658,45,0	1/1:0,10:10:30.10:438,30,0	1/1:0,9:9:27.09:394,27,0	1/1:0,15:14:33.11:482,33,0	1/1:0,12:12:36.12:527,36,0	1/1:0,21:21:51.17:739,51,0	1/1:0,10:10:30.10:439,30,0
chr10	25879448	.	GAC	G	6197.75	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=3.193;DP=426;FS=1.840;HRun=0;HaplotypeScore=84.8906;InbreedingCoeff=0.9843;MQ=80.84;MQ0=1;MQRankSum=-4.860;QD=17.56;ReadPosRankSum=6.693;VQSLOD=4.8354;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,11:11:24.08:391,24,0	1/1:10,0:10:26.53:166,27,0	0/0:18,0:18:29.62:0,30,579	0/0:20,0:18:28.49:0,28,516	1/1:25,0:25:71.71:465,72,0	1/1:19,0:19:47.03:285,47,0	1/1:10,0:10:17.61:105,18,0	0/0:17,0:17:30.52:0,31,307	1/1:14,0:14:26.55:167,27,0	1/1:24,0:24:67.18:417,67,0	1/1:16,0:16:41.91:282,42,0	1/1:17,0:17:44.21:287,44,0	1/1:15,0:15:35.46:233,35,0	1/1:15,0:15:38.47:252,38,0	1/1:0,1:13:26.68:271,27,0	1/1:10,0:10:20.26:143,20,0	0/0:18,0:18:44.83:0,45,465	1/1:14,0:14:38.23:237,38,0	1/1:19,0:19:53.48:348,53,0	1/1:23,0:23:68.05:478,68,0	1/1:4,0:4:11.78:73,12,0	1/1:17,0:17:44.26:279,44,0	1/1:10,0:10:29.49:185,29,0	1/1:9,0:9:26.73:185,27,0	1/1:15,0:14:32.34:198,32,0	1/1:12,0:12:35.16:210,35,0	1/1:21,0:21:50.30:345,50,0	1/1:10,0:10:29.64:196,30,0
chr10	25879588	.	TA	T	8317.25	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-0.470;DP=511;FS=4.437;HRun=9;HaplotypeScore=62.8633;InbreedingCoeff=0.9709;MQ=86.97;MQ0=1;MQRankSum=-4.078;QD=21.11;ReadPosRankSum=6.356;VQSLOD=5.0301;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:0,17:17:36.02:329,36,0	1/1:0,9:9:18.01:165,18,0	0/0:38,1:31:40.64:0,41,525	0/0:25,0:21:10.22:0,10,246	1/1:0,18:18:54.03:494,54,0	1/1:7,18:25:45.02:412,45,0	1/1:4,13:17:27.01:247,27,0	0/0:15,0:15:36.10:0,36,407	1/1:0,11:11:27.01:247,27,0	1/1:1,23:24:68.99:620,69,0	1/1:2,17:19:48.01:439,48,0	1/1:3,11:14:33:302,33,0	1/1:1,4:5:9:82,9,0	1/1:1,13:14:33.01:302,33,0	0/0:17,0:17:47.98:0,48,498	1/1:2,11:13:30.01:275,30,0	0/0:20,0:20:48.14:0,48,554	1/1:1,12:13:30.01:274,30,0	1/1:4,18:23:50.02:434,50,0	1/1:4,17:21:50.94:456,51,0	1/1:1,11:12:27.01:247,27,0	1/1:1,14:15:33:302,33,0	1/1:1,13:14:36.02:329,36,0	1/1:3,13:16:42.01:380,42,0	1/1:5,9:14:17.99:165,18,0	1/1:2,27:29:77.91:690,78,0	1/1:4,24:28:57.02:522,57,0	1/1:1,22:23:66.03:604,66,0
chr10	25882087	.	A	ACC	12822.46	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-0.867;DP=467;FS=12.469;HRun=5;HaplotypeScore=159.3033;InbreedingCoeff=0.8951;MQ=67.16;MQ0=3;MQRankSum=-3.803;QD=31.43;ReadPosRankSum=5.317;VQSLOD=3.3392;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,0:27:57.19:216,57,0	1/1:2,3:5:15.01:217,15,0	0/0:27,0:17:33.65:0,34,317	0/0:29,0:17:5.48:0,5,130	1/1:7,17:25:41.95:664,42,0	1/1:6,12:18:35.71:580,36,0	1/1:5,9:14:20.61:361,21,0	1/1:6,0:21:43.57:177,44,0	1/1:3,13:16:45.15:752,45,0	1/1:3,11:14:42.14:707,42,0	1/1:4,13:17:18.66:360,19,0	1/1:2,14:16:45.15:772,45,0	1/1:5,11:16:39.13:675,39,0	1/1:1,6:7:21.07:340,21,0	1/1:4,0:13:24.83:88,25,0	1/1:3,14:17:39.13:680,39,0	1/1:3,0:15:27.92:109,28,0	1/1:0,6:6:18.06:313,18,0	1/1:8,12:19:48.15:767,48,0	1/1:5,15:19:32.66:575,33,0	1/1:6,7:13:24.05:358,24,0	1/1:3,12:15:39.13:677,39,0	1/1:2,6:8:18.06:309,18,0	1/1:4,6:10:14.96:226,15,0	1/1:7,18:25:39.05:745,39,0	1/1:2,12:14:36.12:596,36,0	1/1:5,25:30:83.66:1375,84,0	1/1:2,4:6:14.96:183,15,0
chr10	25882114	.	A	AAAAG	15110.59	PASS	AB=0.815;AC=49;AF=0.875;AN=56;BaseQRankSum=1.262;DP=556;FS=9.878;HRun=0;HaplotypeScore=175.2327;InbreedingCoeff=0.6430;MQ=57.21;MQ0=5;MQRankSum=-3.087;QD=33.73;ReadPosRankSum=2.297;VQSLOD=4.4427;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:63.13:0,63,926	1/1:1,8:9:21.07:475,21,0	0/0:37,0:19:0.86:0,1,151	0/0:46,0:27:4.87:0,5,265	1/1:6,20:28:54.18:970,54,0	1/1:11,9:20:45.15:920,45,0	1/1:6,5:11:18.06:404,18,0	1/1:16,0:27:26.26:321,26,0	1/1:4,13:17:27.09:646,27,0	1/1:2,16:19:51.17:1137,51,0	1/1:8,12:24:36.12:755,36,0	1/1:6,12:18:27.09:643,27,0	1/1:6,10:17:17.78:440,18,0	1/1:3,4:7:15.05:366,15,0	1/1:5,1:15:16.76:244,17,0	1/1:5,12:18:30.10:736,30,0	1/1:17,0:23:23.98:281,24,0	1/1:3,8:11:12.04:294,12,0	0/1:17,5:20:14.12:440,0,14	1/1:18,11:28:66.22:1374,66,0	1/1:4,6:11:9.01:171,9,0	1/1:7,9:17:30.10:620,30,0	1/1:2,13:15:21.07:515,21,0	1/1:8,2:10:12.04:253,12,0	1/1:6,25:33:48.16:1172,48,0	1/1:2,14:16:42.14:870,42,0	1/1:12,10:21:36.12:844,36,0	1/1:1,8:9:9.03:221,9,0
chr10	25882225	.	GA	G	15792.74	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=0.485;DP=578;FS=1.981;HRun=5;HaplotypeScore=96.5068;InbreedingCoeff=0.9977;MQ=89.12;MQ0=0;MQRankSum=-10.636;QD=30.31;ReadPosRankSum=5.974;VQSLOD=4.6622;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,26:29:66.19:749,66,0	1/1:0,8:8:24.07:272,24,0	0/0:31,1:31:71.61:0,72,949	0/0:25,0:25:56.61:0,57,705	1/1:3,20:23:54.15:612,54,0	1/1:0,20:20:57.16:642,57,0	1/1:0,15:15:45.13:507,45,0	1/1:1,34:35:96.17:1032,96,0	1/1:0,19:19:54.15:612,54,0	1/1:0,23:23:69.18:770,69,0	1/1:2,16:18:45.13:511,45,0	1/1:0,13:13:36.10:406,36,0	1/1:2,24:26:66.19:746,66,0	1/1:0,14:14:39.11:442,39,0	1/1:1,25:26:72.21:817,72,0	1/1:1,8:9:24.07:272,24,0	1/1:1,18:19:45.13:508,45,0	1/1:0,17:17:48.14:544,48,0	1/1:2,24:26:62.35:773,62,0	1/1:0,31:31:90.26:1021,90,0	1/1:1,16:17:45.13:510,45,0	1/1:0,24:24:66.19:747,66,0	1/1:0,16:16:45.13:511,45,0	1/1:1,18:19:48.14:544,48,0	1/1:1,21:22:60.17:681,60,0	1/1:2,18:20:54.15:612,54,0	1/1:2,17:19:48.14:544,48,0	1/1:0,13:13:36.10:408,36,0
chr10	25883757	.	AG	A	3988.27	PASS	AB=0.698;AC=40;AF=0.833;AN=48;BaseQRankSum=-3.262;DP=438;FS=6.766;HRun=1;HaplotypeScore=41.7145;InbreedingCoeff=0.4929;MQ=18.29;MQ0=176;MQRankSum=-0.847;QD=12.35;ReadPosRankSum=-1.600;VQSLOD=1.2844;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:7:21:0,21,304	1/1:1,4:4:9:104,9,0	./.	./.	1/1:1,15:15:20.68:170,21,0	1/1:2,14:12:15.05:209,15,0	./.	0/0:18,0:2:6.02:0,6,89	1/1:6,13:4:9.03:125,9,0	1/1:2,17:15:42.14:573,42,0	1/1:0,13:13:14.90:160,15,0	1/1:4,16:11:12.04:167,12,0	1/1:6,14:10:24.08:334,24,0	0/1:3,7:8:32.62:152,0,33	1/1:9,11:7:15.01:187,15,0	1/1:5,13:6:6.02:84,6,0	0/0:26,0:6:9.03:0,9,124	0/1:16,5:6:35.83:36,0,42	1/1:3,7:6:18.06:251,18,0	1/1:0,12:11:20.89:223,21,0	./.	1/1:1,10:9:17.84:159,18,0	1/1:1,10:10:14.91:161,15,0	1/1:19,2:2:3.01:42,3,0	1/1:0,12:11:6.02:84,6,0	1/1:4,17:12:36.08:476,36,0	1/1:5,17:15:14.84:209,15,0	1/1:3,3:3:6.02:84,6,0
chr10	25884047	.	AAAAC	A	9032.78	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=2.466;DP=336;FS=8.793;HRun=0;HaplotypeScore=81.5555;InbreedingCoeff=0.7688;MQ=44.97;MQ0=3;MQRankSum=-1.809;QD=29.33;ReadPosRankSum=4.853;VQSLOD=3.8874;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,9:12:17.98:267,18,0	1/1:3,4:7:15.05:250,15,0	0/0:19,0:11:21.02:0,21,416	0/0:9,0:7:17.85:0,18,333	1/1:4,12:16:30.10:499,30,0	1/1:6,10:16:30.10:499,30,0	1/1:5,4:8:14.98:193,15,0	1/1:6,5:9:12.01:167,12,0	1/1:3,6:9:21.07:337,21,0	1/1:6,10:16:39.06:587,39,0	1/1:3,6:9:17.99:268,18,0	1/1:2,4:6:15.05:250,15,0	1/1:5,6:11:21.07:349,21,0	1/1:3,2:5:8.96:118,9,0	1/1:5,12:17:45.14:718,45,0	1/1:2,4:6:12.04:200,12,0	1/1:7,4:11:20.89:279,21,0	1/1:2,2:4:6.02:100,6,0	1/1:5,3:6:9.02:125,9,0	1/1:9,13:22:48.05:714,48,0	1/1:4,6:8:5.93:67,6,0	1/1:5,9:14:21.07:349,21,0	1/1:4,11:15:30.10:487,30,0	1/1:2,3:5:9.03:150,9,0	1/1:6,15:21:42.08:667,42,0	1/1:4,11:15:33.11:549,33,0	1/1:6,11:17:33.11:547,33,0	1/1:5,8:13:18.06:300,18,0
chr10	25884095	.	C	CAAAAAA	12922.52	PASS	AB=1.000;AC=51;AF=0.911;AN=56;BaseQRankSum=-2.928;DP=396;FS=28.517;HRun=10;HaplotypeScore=149.0975;InbreedingCoeff=0.5756;MQ=71.04;MQ0=3;MQRankSum=-4.684;QD=37.46;ReadPosRankSum=1.309;VQSLOD=1.0883;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:15.37:0,15,176	1/1:4,2:6:15.03:321,15,0	0/0:40,0:30:16.64:0,17,380	0/1:44,0:25:27.89:28,0,206	1/1:8,5:17:36.12:1016,36,0	1/1:13,2:16:30.06:597,30,0	1/1:4,1:5:9.03:201,9,0	1/1:7,0:10:21.04:256,21,0	1/1:10,5:18:39.13:984,39,0	1/1:12,9:22:42.11:1159,42,0	1/1:7,2:11:21.07:433,21,0	1/1:2,3:8:18.06:492,18,0	1/1:8,1:10:15.05:414,15,0	1/1:5,1:6:12.04:274,12,0	1/1:4,5:13:33.10:948,33,0	1/1:5,6:11:24.07:602,24,0	1/1:10,0:13:18.02:230,18,0	1/1:4,2:6:6.02:193,6,0	1/1:16,3:20:24.08:635,24,0	1/1:9,5:13:15.05:483,15,0	1/1:5,0:5:11.99:233,12,0	1/1:8,1:12:24.08:516,24,0	1/1:9,2:11:12.04:284,12,0	1/1:2,1:3:3.01:97,3,0	1/1:3,4:10:21.07:582,21,0	1/1:12,3:17:36.10:844,36,0	1/1:6,8:15:36.12:1034,36,0	1/1:6,0:7:3.01:66,3,0
chr10	25884104	.	AAG	A	145.43	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=0.776;DP=411;FS=10.757;HRun=0;HaplotypeScore=143.4961;InbreedingCoeff=0.7875;MQ=74.95;MQ0=4;MQRankSum=2.332;QD=16.16;ReadPosRankSum=-0.751;VQSLOD=3.2590;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,7:9:20.94:237,21,0	0/0:7,0:7:20.91:0,21,233	0/0:48,0:31:19.94:0,20,710	0/0:51,1:29:15.31:0,15,422	0/0:16,0:16:44.99:0,45,473	0/0:14,0:14:41.88:0,42,513	0/0:6,0:6:17.92:0,18,149	0/0:16,0:14:35.08:0,35,441	0/0:22,0:20:56.92:0,57,607	0/0:20,0:19:55.32:0,55,609	0/0:14,0:13:29.91:0,30,306	0/0:8,0:8:23.99:0,24,238	0/0:10,0:9:27:0,27,306	0/0:7,0:6:15.01:0,15,199	0/0:14,0:13:38.51:0,39,359	0/0:12,0:10:29.34:0,29,328	0/0:11,0:11:32.85:0,33,336	0/0:6,0:6:14.97:0,15,140	0/0:25,0:23:62.22:0,62,663	0/0:13,0:12:32.87:0,33,294	0/0:5,0:5:13.22:0,13,154	0/0:10,0:10:29.82:0,30,325	0/0:8,0:8:23.83:0,24,197	0/0:5,0:5:9:0,9,86	0/0:14,0:14:41.98:0,42,415	0/0:20,0:20:60.03:0,60,691	0/0:17,0:17:50.42:0,50,506	0/0:2,0:2:5.99:0,6,57
chr10	25884120	.	CA	C	6725.83	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-1.426;DP=427;FS=48.110;HRun=7;HaplotypeScore=111.8570;InbreedingCoeff=0.7805;MQ=76.91;MQ0=4;MQRankSum=-4.420;QD=20.57;ReadPosRankSum=3.250;VQSLOD=1.7478;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,8:11:24.05:243,24,0	1/1:3,6:9:21.04:212,21,0	0/0:46,0:31:31.98:0,32,449	0/0:51,1:32:6.75:0,7,356	1/1:7,9:16:21.78:196,22,0	1/1:3,13:16:44.59:412,45,0	1/1:2,11:13:32.97:307,33,0	1/1:6,12:17:46.16:423,46,0	1/1:9,8:16:36.51:287,37,0	1/1:7,14:20:37.26:373,37,0	1/1:2,11:12:35.44:342,35,0	1/1:6,5:11:19.46:147,19,0	1/1:2,11:12:29.37:266,29,0	1/1:1,6:7:15.03:153,15,0	1/1:8,12:19:22.90:271,23,0	1/1:6,9:13:17.92:220,18,0	1/1:5,4:9:22.90:198,23,0	1/1:1,4:5:9.02:92,9,0	1/1:4,18:20:57.06:566,57,0	1/1:3,6:9:21.09:183,21,0	1/1:0,4:4:9.02:91,9,0	1/1:2,9:11:27.03:266,27,0	1/1:2,4:6:18.04:182,18,0	1/1:2,5:7:11.58:121,12,0	1/1:2,10:12:29.80:283,30,0	1/1:5,17:22:19.46:463,19,0	1/1:8,11:19:44.92:402,45,0	1/1:1,0:1:3:27,3,0
chr10	25884543	.	ATTT	A	5069.29	PASS	AB=0.676;AC=33;AF=0.589;AN=56;BaseQRankSum=8.937;DP=263;FS=18.180;HRun=3;HaplotypeScore=71.0814;InbreedingCoeff=-0.2037;MQ=67.36;MQ0=0;MQRankSum=-0.036;QD=21.30;ReadPosRankSum=10.061;VQSLOD=-0.4724;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:15.05:0,15,197	1/1:1,3:4:2.03:98,2,0	0/0:11,0:9:27.09:0,27,437	0/0:5,0:5:15.05:0,15,262	0/1:3,11:14:31.01:255,0,31	1/1:2,8:10:9.21:272,9,0	0/1:3,1:4:19.29:19,0,32	0/1:13,10:23:52.92:311,0,53	0/1:3,3:6:17.48:89,0,17	1/1:2,11:13:23.49:424,23,0	0/1:5,5:10:0.93:195,0,1	0/1:2,3:5:12.49:67,0,12	0/1:4,7:11:1.37:242,0,1	0/1:5,4:9:39.61:111,0,40	0/1:6,3:9:30.71:121,0,31	0/1:2,5:7:10.02:175,0,10	1/1:5,14:19:29.58:541,30,0	0/1:5,4:9:7.53:181,0,8	0/1:6,4:10:36.83:176,0,37	0/1:2,4:6:7.92:132,0,8	0/1:4,2:6:42.35:62,0,42	0/1:6,2:8:44.61:85,0,45	1/1:1,2:3:9.03:108,9,0	1/1:1,2:3:6.02:74,6,0	1/1:1,11:12:33.10:416,33,0	1/1:5,9:14:21.30:411,21,0	0/1:7,12:19:1.75:441,0,2	0/1:2,2:4:10.88:62,0,11
chr10	25884939	.	TG	T	5281.62	PASS	AB=0.571;AC=45;AF=0.804;AN=56;BaseQRankSum=5.008;DP=255;FS=3.536;HRun=4;HaplotypeScore=40.0774;InbreedingCoeff=0.7230;MQ=61.58;MQ0=5;MQRankSum=0.696;QD=30.89;ReadPosRankSum=1.840;VQSLOD=4.7690;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:69.23:0,69,959	1/1:0,3:3:9.03:108,9,0	0/0:16,0:9:5.42:0,5,223	0/0:19,0:11:24.08:0,24,334	1/1:0,2:2:6.02:72,6,0	1/1:0,5:5:15.05:180,15,0	1/1:0,15:15:39.12:468,39,0	0/0:12,0:11:30.10:0,30,419	1/1:0,3:3:6.02:72,6,0	1/1:1,7:7:21.06:250,21,0	1/1:0,3:3:6.02:71,6,0	1/1:0,8:8:21.06:252,21,0	1/1:0,7:7:21.06:252,21,0	1/1:0,1:1:3.01:36,3,0	1/1:0,5:5:9.03:108,9,0	1/1:0,4:4:12.04:144,12,0	0/0:14,0:14:39.13:0,39,544	1/1:2,13:15:36.11:432,36,0	1/1:0,8:8:24.07:288,24,0	1/1:0,4:4:12.04:144,12,0	1/1:0,18:18:48.15:576,48,0	1/1:1,9:10:24.07:288,24,0	1/1:0,10:10:24.07:288,24,0	1/1:0,15:15:42.13:504,42,0	1/1:0,6:6:18.06:216,18,0	1/1:0,10:10:30.09:360,30,0	1/1:0,7:6:12.04:144,12,0	0/1:1,3:4:29.96:30,0,36
chr10	25885165	.	CACAGGGG	C	27930.78	PASS	AB=0.553;AC=48;AF=0.889;AN=54;BaseQRankSum=3.049;DP=463;FS=9.701;HRun=0;HaplotypeScore=145.0445;InbreedingCoeff=0.6282;MQ=49.16;MQ0=0;MQRankSum=-10.163;QD=67.30;ReadPosRankSum=7.310;VQSLOD=4.2343;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,41:41:90.31:2480,90,0	1/1:0,8:8:24.08:669,24,0	0/0:18,0:16:48.07:0,48,1535	0/0:30,0:29:87.05:0,87,2998	1/1:0,16:16:36.12:1002,36,0	1/1:0,21:22:63.22:1748,63,0	1/1:0,16:16:45.15:1247,45,0	1/1:0,15:14:39.05:765,39,0	1/1:0,24:24:63.22:1756,63,0	1/1:0,19:19:57.18:1525,57,0	1/1:0,13:13:33.11:917,33,0	1/1:0,16:17:45.15:1247,45,0	1/1:0,21:21:54.19:1503,54,0	0/1:1,13:14:9.51:803,0,10	1/1:0,23:23:57.20:1588,57,0	1/1:0,19:19:48.16:1338,48,0	1/1:5,14:19:45.14:1094,45,0	0/1:3,7:10:60.01:400,0,60	1/1:0,19:19:54.06:1084,54,0	1/1:0,16:16:45.15:1251,45,0	1/1:0,15:13:27.09:751,27,0	1/1:0,9:9:21.07:585,21,0	1/1:0,13:13:29.97:833,30,0	1/1:0,8:8:15.05:416,15,0	1/1:0,7:7:15.05:418,15,0	1/1:0,12:12:36.12:1005,36,0	1/1:0,19:19:54.19:1504,54,0	./.
chr10	25885218	.	CTCTT	C	1505.65	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=1.421;DP=536;FS=3.568;HRun=0;HaplotypeScore=173.0449;InbreedingCoeff=0.8856;MQ=43.86;MQ0=14;MQRankSum=-4.717;QD=38.61;ReadPosRankSum=0.895;VQSLOD=3.8657;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,120,2754	0/0:11,0:10:30.10:0,30,800	0/0:5,0:2:3.01:0,3,82	0/0:7,0:5:15.05:0,15,364	0/0:19,0:19:45.15:0,45,1124	0/0:18,0:17:48.16:0,48,1147	0/0:18,0:18:45.15:0,45,1188	1/1:1,14:15:39.13:755,39,0	0/0:33,0:31:93.28:0,93,2335	0/0:23,0:22:63.22:0,63,1638	0/0:6,0:6:18.06:0,18,466	0/0:28,0:27:72.25:0,72,1970	0/0:26,0:26:78.27:0,78,2015	0/0:14,0:13:30.10:0,30,799	0/0:29,0:28:69.24:0,69,1762	0/0:26,0:26:69.24:0,69,1816	1/1:7,17:22:45.15:872,45,0	0/0:21,0:19:51.18:0,51,1379	0/0:19,0:16:39.13:0,39,1023	0/0:15,0:15:45.15:0,45,1164	0/0:26,0:24:72.25:0,72,1836	0/0:14,0:13:36.12:0,36,963	0/0:17,0:17:42.14:0,42,1121	0/0:21,0:20:54.18:0,54,1386	0/0:7,0:6:15.05:0,15,400	0/0:20,0:20:57.20:0,57,1532	0/0:26,0:24:72.25:0,72,1852	0/0:4,0:4:12.04:0,12,329
chr10	25885812	.	CTT	C	4842.60	PASS	AB=0.629;AC=42;AF=0.750;AN=56;BaseQRankSum=-2.075;DP=536;FS=25.001;HRun=15;HaplotypeScore=71.5956;InbreedingCoeff=0.4064;MQ=68.80;MQ0=2;MQRankSum=-0.159;QD=10.88;ReadPosRankSum=6.254;VQSLOD=1.6345;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:11,2:30:19.43:19,0,120	1/1:1,5:7:11.71:91,12,0	0/0:21,0:14:26.92:0,27,230	0/0:18,0:17:7.14:0,7,197	1/1:17,21:40:4.75:382,5,0	1/1:7,12:21:17.59:247,18,0	1/1:2,8:10:17.93:158,18,0	0/0:29,0:31:70:0,70,834	1/1:7,12:20:12.82:275,13,0	1/1:6,15:21:32.65:290,33,0	1/1:6,5:13:14.55:117,15,0	0/1:7,9:16:20.12:134,0,20	0/1:12,4:16:21.97:87,0,22	1/1:5,12:18:4.29:139,4,0	0/1:7,8:16:18.74:112,0,19	1/1:2,12:14:29.96:264,30,0	0/0:18,0:18:24.49:0,24,285	1/1:2,13:15:26.94:238,27,0	1/1:10,14:26:14.27:217,14,0	1/1:6,14:23:23.45:299,23,0	1/1:3,7:11:23.63:197,24,0	1/1:6,9:16:14.58:176,15,0	1/1:7,14:21:25.85:236,26,0	1/1:2,10:15:11.51:194,12,0	1/1:4,20:25:44.63:382,45,0	1/1:8,9:19:20.59:229,21,0	0/1:6,13:21:3.39:226,0,3	0/1:0,7:10:0.44:133,0,0
chr10	25886693	.	CA	C	1267.09	PASS	AB=0.784;AC=24;AF=0.429;AN=56;BaseQRankSum=3.890;DP=293;FS=197.139;HRun=1;HaplotypeScore=54.0882;InbreedingCoeff=-0.7562;MQ=85.14;MQ0=1;MQRankSum=1.390;QD=5.46;ReadPosRankSum=4.784;VQSLOD=0.2197;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:26.33:0,26,147	0/1:9,4:13:99:104,0,127	0/1:17,0:14:12.79:13,0,154	0/0:17,0:12:4.77:0,5,133	0/1:9,2:11:53.36:53,0,109	0/1:6,7:13:65.25:132,0,65	0/1:7,1:8:18.97:19,0,33	0/0:10,0:10:21.30:0,21,224	0/1:7,1:8:38.92:39,0,39	0/1:5,5:10:56.58:57,0,89	0/1:6,3:9:42.06:42,0,86	0/1:2,2:4:6.79:52,0,7	0/1:6,6:12:99:160,0,115	0/1:3,3:6:15.61:65,0,16	0/1:7,2:9:33.16:33,0,119	0/1:7,3:10:49.94:50,0,75	0/1:13,3:16:40.89:41,0,264	0/1:3,1:4:28.48:28,0,51	0/1:4,2:6:48.77:50,0,49	0/1:7,4:11:59.02:59,0,71	0/0:5,0:5:1.29:0,1,59	0/1:9,0:9:15.10:15,0,139	0/1:7,5:12:73.36:101,0,73	0/1:9,6:15:99:126,0,138	0/1:4,2:6:17.38:53,0,17	0/1:4,1:5:8.18:8,0,97	0/1:6,2:8:56.57:57,0,84	0/1:8,2:10:62.11:62,0,98
chr10	25886694	.	ACCCC	A	847.81	PASS	AB=0.857;AC=3;AF=0.054;AN=56;BaseQRankSum=-1.234;DP=285;FS=0.000;HRun=12;HaplotypeScore=72.5834;InbreedingCoeff=0.4227;MQ=85.79;MQ0=1;MQRankSum=-5.148;QD=24.94;ReadPosRankSum=4.199;VQSLOD=1.9594;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,26:28:63.15:924,63,0	0/0:13,0:13:21.87:0,22,260	0/0:17,0:14:4.89:0,5,139	0/0:17,0:12:14.74:0,15,183	0/0:11,0:11:24.08:0,24,404	0/0:13,0:13:33.01:0,33,476	0/0:8,0:8:11.92:0,12,159	0/0:8,0:9:12.03:0,12,258	0/0:5,0:8:12:0,12,136	0/0:10,0:10:18.02:0,18,189	0/0:8,0:9:14.99:0,15,157	0/0:4,0:4:9.03:0,9,116	0/0:11,0:11:33.01:0,33,447	0/1:5,1:6:28.96:29,0,172	0/0:9,0:9:20.96:0,21,261	0/0:10,0:10:21.03:0,21,267	0/0:16,0:16:39.10:0,39,681	0/0:3,0:4:7.03:0,7,148	0/0:5,0:6:12:0,12,156	0/0:9,0:10:12.84:0,13,132	0/0:5,0:5:8.90:0,9,64	0/0:7,0:8:11.98:0,12,115	0/0:11,0:11:12.02:0,12,153	0/0:13,0:14:31.32:0,31,433	0/0:5,0:5:12.04:0,12,171	0/0:5,0:5:11.99:0,12,112	0/0:8,0:8:18.51:0,19,237	0/0:8,0:10:23.95:0,24,290
chr10	25887728	.	TG	T	522.56	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.009;DP=533;FS=3.486;HRun=2;HaplotypeScore=51.9094;InbreedingCoeff=0.9901;MQ=68.95;MQ0=2;MQRankSum=-2.485;QD=27.50;ReadPosRankSum=0.906;VQSLOD=3.2992;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,19:19:48.15:617,48,0	0/0:6,0:6:18.04:0,18,232	0/0:27,0:17:51.16:0,51,730	0/0:17,0:13:36.12:0,36,533	0/0:23,0:23:66.22:0,66,981	0/0:18,0:18:51.17:0,51,758	0/0:12,0:12:36.12:0,36,539	0/0:27,0:27:78.25:0,78,1144	0/0:22,0:22:66.22:0,66,989	0/0:21,0:21:60.20:0,60,883	0/0:22,0:22:57.18:0,57,835	0/0:9,0:9:27.09:0,27,405	0/0:26,0:26:75.25:0,75,1124	0/0:19,0:19:57.19:0,57,850	0/0:15,0:15:45.15:0,45,674	0/0:20,0:20:57.19:0,57,854	0/0:16,0:16:45.15:0,45,674	0/0:16,0:16:45.15:0,45,674	0/0:24,0:24:69.16:0,69,969	0/0:21,0:21:54.18:0,54,809	0/0:15,0:15:36.12:0,36,534	0/0:20,0:20:60.19:0,60,879	0/0:19,0:19:57.19:0,57,853	0/0:14,0:13:33.11:0,33,493	0/0:21,0:21:60.20:0,60,899	0/0:30,0:30:81.26:0,81,1191	0/0:22,0:22:66.21:0,66,969	0/0:11,0:11:33.11:0,33,494
chr10	25887872	.	T	TG	12738.53	PASS	AB=0.594;AC=46;AF=0.821;AN=56;BaseQRankSum=-6.873;DP=569;FS=12.204;HRun=8;HaplotypeScore=60.1093;InbreedingCoeff=0.6188;MQ=68.63;MQ0=3;MQRankSum=-4.051;QD=24.74;ReadPosRankSum=2.859;VQSLOD=4.9754;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,14:24:49.69:548,50,0	1/1:1,5:6:8.73:104,9,0	0/0:17,0:17:22.43:0,22,286	0/0:20,0:16:20.96:0,21,185	1/1:2,36:38:99:1176,102,0	1/1:5,27:32:44.75:769,45,0	1/1:1,15:16:36.11:415,36,0	1/1:7,11:18:5.58:289,6,0	1/1:5,15:20:42.60:486,43,0	0/1:6,16:22:0.82:477,0,1	1/1:5,17:22:20.67:492,21,0	0/1:5,8:13:0.39:248,0,0	1/1:1,24:25:63.19:726,63,0	1/1:3,13:16:33.10:381,33,0	0/0:16,1:17:10.41:0,10,350	1/1:2,13:15:39.12:450,39,0	0/1:6,12:19:3.03:309,0,3	1/1:7,14:20:17.67:457,18,0	1/1:4,13:17:39.12:450,39,0	1/1:5,18:23:48.13:544,48,0	1/1:1,20:21:57.17:658,57,0	0/1:8,26:34:1.16:750,0,1	1/1:2,19:21:54.16:623,54,0	1/1:0,15:14:39.12:450,39,0	1/1:6,15:21:45.13:519,45,0	1/1:7,15:22:26.68:552,27,0	1/1:6,17:22:51.15:588,51,0	1/1:3,8:11:24.07:277,24,0
chr10	25888481	.	A	AT	12550.43	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=5.571;DP=510;FS=10.412;HRun=6;HaplotypeScore=64.6957;InbreedingCoeff=0.9961;MQ=60.83;MQ0=0;MQRankSum=3.372;QD=32.35;ReadPosRankSum=3.364;VQSLOD=4.7552;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:63.12:0,63,634	1/1:0,7:7:21.07:264,21,0	0/0:15,0:12:33.07:0,33,334	0/0:11,0:9:21.05:0,21,214	1/1:1,30:32:93.17:1112,93,0	1/1:2,29:31:84.27:1056,84,0	1/1:2,12:14:30.01:342,30,0	0/0:31,0:31:78.17:0,78,796	1/1:1,14:15:39.12:491,39,0	1/1:2,17:19:51.16:642,51,0	1/1:4,15:19:45.14:566,45,0	1/1:1,16:17:48.15:599,48,0	1/1:1,15:16:45.13:554,45,0	1/1:1,8:9:24.08:302,24,0	0/0:16,0:16:42.09:0,42,428	1/1:0,9:9:24.08:302,24,0	0/0:27,0:27:72.16:0,72,734	1/1:4,16:20:45.12:566,45,0	1/1:3,11:14:36.11:451,36,0	1/1:2,25:27:75.18:909,75,0	1/1:1,10:10:30.10:377,30,0	1/1:0,18:18:54.13:661,54,0	1/1:3,14:17:36.12:452,36,0	1/1:0,10:10:21.07:264,21,0	1/1:1,10:11:27.09:340,27,0	1/1:1,27:28:81.26:1019,81,0	1/1:4,22:26:63.20:793,63,0	1/1:3,15:18:39.12:491,39,0
chr10	25889438	.	T	TA	10764.82	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-5.899;DP=450;FS=21.837;HRun=9;HaplotypeScore=45.3570;InbreedingCoeff=0.9051;MQ=68.77;MQ0=2;MQRankSum=-1.483;QD=25.63;ReadPosRankSum=4.056;VQSLOD=3.4529;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,21:25:51.14:564,51,0	1/1:1,7:9:21.06:232,21,0	0/0:12,0:9:11.94:0,12,103	0/0:16,0:14:26.66:0,27,218	1/1:3,18:21:45.12:498,45,0	1/1:1,20:21:51.14:564,51,0	1/1:4,14:19:45.10:487,45,0	1/1:4,18:22:54.15:597,54,0	1/1:2,10:12:24.06:265,24,0	1/1:5,17:23:50.95:536,51,0	1/1:0,21:22:59.99:642,60,0	1/1:1,11:12:27.07:299,27,0	1/1:2,13:15:36.06:385,36,0	1/1:2,10:12:30.08:332,30,0	1/1:0,5:5:9.02:100,9,0	1/1:0,13:13:33.09:365,33,0	1/1:3,14:17:7.05:306,7,0	1/1:3,8:11:22.49:266,22,0	1/1:4,17:20:53.98:578,54,0	1/1:0,18:18:47.97:488,48,0	1/1:2,9:11:24.06:266,24,0	1/1:0,13:13:36.10:398,36,0	1/1:1,19:20:54.15:597,54,0	1/1:0,8:8:24.06:265,24,0	1/1:3,12:15:33.09:365,33,0	1/1:2,23:25:69.17:754,69,0	1/1:5,16:21:32.94:365,33,0	1/1:1,7:8:24.01:251,24,0
chr10	25892157	.	AT	A	508.43	PASS	AB=0.932;AC=7;AF=0.125;AN=56;BaseQRankSum=5.257;DP=504;FS=2.774;HRun=13;HaplotypeScore=58.7884;InbreedingCoeff=0.4918;MQ=77.38;MQ0=1;MQRankSum=0.136;QD=4.24;ReadPosRankSum=0.751;VQSLOD=0.9320;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,23:25:56.64:414,57,0	0/0:8,0:8:12.02:0,12,117	0/1:29,0:26:6.45:6,0,240	0/0:9,1:8:2.45:0,2,47	0/0:17,2:24:12.69:0,13,383	0/0:21,1:22:32.16:0,32,462	0/0:13,0:13:35.99:0,36,330	0/0:26,2:28:43.98:0,44,553	0/0:22,0:22:48.01:0,48,444	0/0:28,0:28:63.01:0,63,581	0/0:13,2:15:5.17:0,5,289	0/0:11,0:11:33.05:0,33,321	0/0:16,0:16:25.31:0,25,296	0/0:9,0:9:23.98:0,24,219	1/1:2,13:15:26.80:193,27,0	0/0:10,0:11:26.84:0,27,230	0/1:20,2:22:1.75:2,0,333	0/0:9,0:9:18.01:0,18,168	0/1:25,4:29:25.82:26,0,394	0/0:19,1:21:23.46:0,23,411	0/0:18,0:18:45:0,45,422	0/0:15,0:15:17.15:0,17,323	0/0:19,0:19:41.98:0,42,392	0/0:12,0:12:30.01:0,30,282	0/0:14,0:14:39.06:0,39,380	0/0:18,0:18:36.01:0,36,340	0/0:27,0:31:67.63:0,68,614	0/0:9,0:9:21:0,21,196
chr10	25893854	.	CGTT	C	1635.04	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=3.835;DP=496;FS=3.166;HRun=0;HaplotypeScore=89.5628;InbreedingCoeff=0.9664;MQ=97.97;MQ0=0;MQRankSum=-5.641;QD=40.88;ReadPosRankSum=-0.485;VQSLOD=4.5113;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:78.23:0,78,1672	0/0:8,0:8:18.02:0,18,364	0/0:28,0:28:72.22:0,72,1561	0/0:23,0:23:63.11:0,63,1283	0/0:13,0:13:39.13:0,39,878	0/0:22,0:22:63.17:0,63,1348	0/0:19,0:19:51.12:0,51,1124	1/1:1,22:23:66.21:1093,66,0	0/0:15,0:15:42.14:0,42,968	0/0:20,0:20:60.19:0,60,1289	0/0:12,0:12:36.12:0,36,812	0/0:14,0:14:42.14:0,42,963	0/0:19,0:19:45.15:0,45,1018	0/0:14,0:14:42.12:0,42,920	0/0:20,0:20:57.18:0,57,1252	0/0:12,0:12:33.11:0,33,755	1/1:2,15:17:39.13:664,39,0	0/0:13,0:12:39.11:0,39,852	0/0:32,0:32:90.24:0,90,1942	0/0:15,0:15:39.13:0,39,897	0/0:21,0:21:45.12:0,45,923	0/0:17,0:17:51.17:0,51,1132	0/0:15,0:15:36.12:0,36,798	0/0:12,0:12:36.11:0,36,785	0/0:19,0:19:51.11:0,51,1121	0/0:25,0:25:66.22:0,66,1480	0/0:18,0:18:51.13:0,51,1122	0/0:3,0:3:9.03:0,9,207
chr10	25893892	.	T	TGGG	11320.18	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-1.768;DP=510;FS=8.244;HRun=7;HaplotypeScore=111.5718;InbreedingCoeff=0.9539;MQ=85.23;MQ0=0;MQRankSum=-5.447;QD=28.23;ReadPosRankSum=0.283;VQSLOD=2.3642;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:57.17:0,57,778	1/1:2,4:6:9.43:105,9,0	0/0:22,0:22:54.02:0,54,689	0/0:15,0:15:27.44:0,27,458	1/1:4,7:16:18.04:264,18,0	1/1:5,17:25:45.15:933,45,0	1/1:6,18:24:48.12:953,48,0	0/0:18,0:18:48.11:0,48,593	1/1:9,13:23:39.13:762,39,0	1/1:9,7:16:15.05:300,15,0	1/1:7,3:18:11.99:170,12,0	1/1:2,13:17:33.05:586,33,0	1/1:3,10:14:24.97:500,25,0	1/1:2,7:9:15.05:285,15,0	0/0:15,0:15:42.12:0,42,557	1/1:2,12:15:33.11:641,33,0	0/0:14,0:14:30.06:0,30,393	1/1:4,1:8:8.99:109,9,0	1/1:9,13:23:48.13:864,48,0	1/1:5,15:23:41.57:676,42,0	1/1:6,9:20:17.51:236,18,0	1/1:8,12:24:30.05:528,30,0	1/1:5,11:18:20.64:396,21,0	1/1:1,6:8:12.49:211,12,0	1/1:7,18:27:36.12:730,36,0	1/1:7,17:25:39.54:667,40,0	1/1:5,21:28:54.16:1056,54,0	1/1:6,7:14:21.05:350,21,0
chr10	25894760	.	CAT	C	1904.95	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-8.630;DP=639;FS=6.445;HRun=0;HaplotypeScore=122.5617;InbreedingCoeff=0.9956;MQ=91.47;MQ0=0;MQRankSum=-1.211;QD=41.41;ReadPosRankSum=-2.403;VQSLOD=4.3645;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:93.19:0,93,981	0/0:12,0:12:36.04:0,36,359	0/0:32,0:32:85.02:0,85,1474	0/0:21,0:21:51.05:0,51,882	0/0:20,0:20:60.14:0,60,630	0/0:25,0:25:69.15:0,69,726	0/0:24,0:24:72.16:0,72,752	1/1:0,29:29:87.27:1292,87,0	0/0:25,0:25:75.18:0,75,793	0/0:30,0:30:82.36:0,82,802	0/0:26,0:26:55.21:0,55,779	0/0:13,0:13:39.05:0,39,391	0/0:17,0:17:51.10:0,51,527	0/0:18,0:18:51.09:0,51,530	0/0:21,0:21:35.16:0,35,569	0/0:18,0:18:54.11:0,54,563	1/1:0,17:17:48.16:735,48,0	0/0:14,0:14:42.11:0,42,468	0/0:29,0:29:84.11:0,84,799	0/0:30,0:30:65.22:0,65,877	0/0:38,0:38:86.30:0,86,1105	0/0:29,0:29:55.22:0,55,788	0/0:26,0:26:51.20:0,51,730	0/0:15,0:15:39.06:0,39,398	0/0:24,0:24:66.68:0,67,723	0/0:20,0:20:60.07:0,60,570	0/0:27,0:27:81.17:0,81,846	0/0:6,0:6:18.05:0,18,196
chr10	25896095	.	GA	G	780.20	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.336;DP=499;FS=1.376;HRun=9;HaplotypeScore=50.0760;InbreedingCoeff=0.9075;MQ=70.46;MQ0=0;MQRankSum=-0.447;QD=20.01;ReadPosRankSum=-2.612;VQSLOD=2.8747;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:54.16:0,54,623	0/0:8,0:8:24.07:0,24,277	0/0:14,0:13:5.23:0,5,241	0/0:8,0:5:9:0,9,84	0/0:38,0:38:99:0,102,1168	0/0:22,0:22:63.19:0,63,726	0/0:12,0:12:36.11:0,36,415	1/1:3,19:22:57.01:517,57,0	0/0:18,0:18:51.13:0,51,570	0/0:21,0:21:57.15:0,57,637	0/0:26,0:26:72.19:0,72,812	0/0:14,0:14:33.10:0,33,381	0/0:15,0:15:42.12:0,42,476	0/0:16,0:16:36.08:0,36,400	0/0:9,0:9:24.07:0,24,277	0/0:11,0:11:33.10:0,33,381	1/1:2,15:17:42.02:384,42,0	0/0:11,0:11:24.07:0,24,277	0/0:29,0:29:78.22:0,78,890	0/0:27,0:27:72.21:0,72,831	0/0:12,0:12:36.11:0,36,415	0/0:24,1:25:29.70:0,30,596	0/0:20,0:20:57.14:0,57,639	0/0:7,0:7:21.06:0,21,242	0/0:14,0:14:39.12:0,39,450	0/0:29,1:30:50.75:0,51,822	0/0:26,0:26:75.21:0,75,850	0/0:7,0:7:21.06:0,21,242
chr10	25896431	.	TA	T	462.67	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=5.084;DP=397;FS=21.681;HRun=6;HaplotypeScore=40.8424;InbreedingCoeff=0.8085;MQ=79.08;MQ0=0;MQRankSum=-1.700;QD=15.95;ReadPosRankSum=-2.107;VQSLOD=1.4649;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:63.20:0,63,829	0/0:6,0:6:15.05:0,15,197	0/0:12,0:12:24.07:0,24,299	0/1:7,0:7:2.16:2,0,209	0/0:26,0:26:78.24:0,78,1009	0/0:15,0:15:45.15:0,45,592	0/0:7,0:7:21.07:0,21,276	1/1:1,13:14:39.10:419,39,0	0/0:15,0:15:42.14:0,42,550	0/0:26,0:26:75.24:0,75,973	0/0:21,0:21:54.17:0,54,697	0/0:8,0:8:24.08:0,24,316	0/0:11,0:11:27.09:0,27,355	0/0:8,0:8:24.08:0,24,316	0/0:18,0:18:51.16:0,51,661	0/0:14,0:14:42.14:0,42,553	1/1:0,8:8:15.04:161,15,0	0/0:10,0:10:27.09:0,27,355	0/0:18,0:18:54.18:0,54,711	0/0:21,0:21:57.18:0,57,737	0/0:10,0:10:30.06:0,30,376	0/0:12,0:12:33.11:0,33,430	0/0:14,0:14:39.13:0,39,513	0/0:4,0:4:9.03:0,9,118	0/0:8,0:8:18.06:0,18,237	0/0:28,0:28:75.24:0,75,986	0/0:22,0:21:63.20:0,63,829	0/0:11,0:11:27.09:0,27,352
chr10	25896460	.	C	CTA	413.13	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.659;DP=395;FS=22.364;HRun=0;HaplotypeScore=52.6521;InbreedingCoeff=0.6641;MQ=65.83;MQ0=0;MQRankSum=-3.366;QD=22.95;ReadPosRankSum=-2.440;VQSLOD=1.3562;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:54.18:0,54,701	0/0:4,0:4:12.04:0,12,156	0/0:6,0:5:6.38:0,6,47	0/0:3,0:2:6.02:0,6,75	0/0:27,0:27:69.21:0,69,881	0/0:18,0:18:39.10:0,39,477	0/0:8,0:8:24.08:0,24,312	1/1:12,6:18:36.11:507,36,0	0/0:11,0:11:24.06:0,24,297	0/0:26,0:26:78.24:0,78,993	0/0:21,0:21:49.57:0,50,643	0/0:7,0:7:21.07:0,21,273	0/0:10,0:10:24.08:0,24,312	0/0:11,0:11:30.10:0,30,389	0/0:16,0:16:42.12:0,42,532	0/0:14,0:14:33.09:0,33,415	0/0:5,1:6:0.74:0,1,1	0/0:8,0:8:18.06:0,18,234	0/0:20,0:20:60.15:0,60,727	0/0:27,0:27:72.23:0,72,935	0/0:12,0:12:36.12:0,36,468	0/0:8,0:8:21.06:0,21,259	0/0:12,0:12:30.10:0,30,390	0/0:3,0:3:3.01:0,3,38	0/0:6,0:6:18.05:0,18,220	0/0:36,0:36:99:0,99,1266	0/0:22,0:21:63.18:0,63,803	0/0:10,0:10:27.09:0,27,347
chr10	25896835	.	GGT	G	938.10	PASS	AB=0.925;AC=35;AF=0.700;AN=50;BaseQRankSum=-0.048;DP=473;FS=0.000;HRun=0;HaplotypeScore=62.9861;InbreedingCoeff=-0.0020;MQ=62.46;MQ0=15;MQRankSum=2.357;QD=2.83;ReadPosRankSum=1.414;VQSLOD=1.5572;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:22,1:22:5.74:44,6,0	1/1:5,0:5:3.01:32,3,0	./.	0/0:37,0:20:0:0,0,0	0/1:15,0:14:29.45:45,0,29	1/1:13,0:14:10.13:54,10,0	0/1:13,1:14:26.06:26,0,38	./.	1/1:2,3:5:2.87:32,3,0	0/0:17,0:17:5.99:0,6,62	1/1:9,2:11:3:32,3,0	0/1:11,1:13:20.22:20,0,54	1/1:13,0:15:11.48:73,11,0	0/1:15,1:16:25.56:69,0,26	0/0:13,0:18:9.01:0,9,95	1/1:5,7:11:9.02:96,9,0	0/1:22,1:22:19.94:34,0,20	0/0:8,0:8:1.04:0,1,3	1/1:21,0:20:3:31,3,0	0/1:25,1:28:3.92:137,0,4	./.	1/1:9,0:12:2.84:14,3,0	1/1:14,5:20:6.02:64,6,0	1/1:16,4:20:3.01:32,3,0	1/1:10,1:9:6.32:47,6,0	0/1:15,6:20:19.21:26,0,19	1/1:16,4:21:9.10:126,9,0	1/1:9,1:10:6:40,6,0
chr10	25898010	.	G	GT	2083.41	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-2.460;DP=484;FS=0.541;HRun=4;HaplotypeScore=70.9491;InbreedingCoeff=0.9616;MQ=80.20;MQ0=0;MQRankSum=-0.135;QD=34.15;ReadPosRankSum=-3.643;VQSLOD=2.5859;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:72.19:0,72,805	0/0:7,0:7:18.05:0,18,204	0/0:15,0:15:33.07:0,33,355	0/0:14,0:14:30.55:0,31,334	0/0:20,0:20:54.15:0,54,612	0/0:21,0:21:45.12:0,45,510	0/0:19,0:19:57.16:0,57,646	1/1:3,38:41:99:1508,114,0	0/0:16,0:16:42.12:0,42,476	0/0:30,0:30:84.24:0,84,952	0/0:16,0:16:45.11:0,45,501	0/0:15,0:15:42.12:0,42,476	0/0:24,0:24:57.15:0,57,646	0/0:14,0:14:36.10:0,36,408	0/0:15,0:15:42.10:0,42,467	0/0:17,0:17:48.12:0,48,535	1/1:1,19:20:51.17:697,51,0	0/0:5,0:5:9.03:0,9,102	0/0:21,0:21:57.16:0,57,646	0/0:23,0:23:63.18:0,63,714	0/0:12,0:12:33.09:0,33,374	0/0:11,0:11:30.09:0,30,340	0/0:19,0:19:48.12:0,48,533	0/0:8,0:8:21.06:0,21,238	0/0:11,0:11:27.08:0,27,306	0/0:18,0:18:54.15:0,54,604	0/0:18,0:18:45.11:0,45,500	0/0:10,0:10:21.06:0,21,238
chr10	25898092	.	TCCTCTA	T	19675.67	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=7.350;DP=560;FS=0.370;HRun=0;HaplotypeScore=141.3584;InbreedingCoeff=0.9365;MQ=81.16;MQ0=0;MQRankSum=-16.197;QD=48.70;ReadPosRankSum=6.502;VQSLOD=4.5275;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,102,3473	1/1:0,9:9:24.08:567,24,0	0/0:28,0:28:78.21:0,78,2480	0/0:23,0:23:57.62:0,58,1555	1/1:0,34:34:54.06:1123,54,0	1/1:3,17:20:36.12:850,36,0	1/1:1,15:16:33.11:779,33,0	0/0:31,0:31:93.29:0,93,3065	1/1:0,27:27:78.27:1842,78,0	1/1:0,17:17:51.13:1125,51,0	1/1:1,28:29:54.19:1275,54,0	1/1:1,12:13:27.09:638,27,0	1/1:2,18:20:45.15:1063,45,0	1/1:0,20:20:42.14:992,42,0	0/0:19,0:19:57.20:0,57,1996	1/1:0,13:13:33.08:729,33,0	0/0:20,0:20:54.17:0,54,1725	1/1:0,7:7:3.01:71,3,0	1/1:1,20:21:60.17:1254,60,0	1/1:0,23:23:54.07:1125,54,0	1/1:1,11:12:11.95:182,12,0	1/1:1,13:14:24.08:567,24,0	1/1:0,19:19:36.08:799,36,0	1/1:1,11:12:6.02:142,6,0	1/1:0,18:18:30.10:709,30,0	1/1:0,19:19:57.13:1294,57,0	1/1:2,30:32:90.31:2124,90,0	1/1:0,9:9:18.06:425,18,0
chr10	25899307	.	CCCT	C	1253.64	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-1.205;DP=555;FS=1.382;HRun=0;HaplotypeScore=105.0940;InbreedingCoeff=0.9915;MQ=80.63;MQ0=1;MQRankSum=-2.615;QD=34.82;ReadPosRankSum=-1.825;VQSLOD=3.9780;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,102,2026	0/0:6,0:6:18.06:0,18,383	0/0:20,0:20:42.85:0,43,785	0/0:27,0:26:41.22:0,41,1032	0/0:25,0:25:72.18:0,72,1453	0/0:15,0:15:45.14:0,45,922	0/0:19,0:19:57.18:0,57,1166	1/1:0,18:18:51.53:721,52,0	0/0:15,0:15:45.15:0,45,957	0/0:25,0:25:69.21:0,69,1332	0/0:26,0:26:75.23:0,75,1492	0/0:16,0:16:48.14:0,48,948	0/0:23,0:23:69.24:0,69,1471	0/0:18,0:18:54.19:0,54,1131	0/0:12,0:12:36.12:0,36,769	0/0:13,0:13:36.09:0,36,656	1/1:0,18:18:39.13:654,39,0	0/0:15,0:15:45.13:0,45,905	0/0:25,0:25:69.29:0,69,1370	0/0:25,0:25:66.21:0,66,1292	0/0:35,0:35:99:0,99,2007	0/0:22,0:22:66.20:0,66,1321	0/0:19,0:19:54.17:0,54,1063	0/0:20,0:20:54.09:0,54,1003	0/0:19,0:19:54.17:0,54,1080	0/0:18,0:18:54.17:0,54,1104	0/0:18,0:18:51.17:0,51,1088	0/0:7,0:7:18.06:0,18,373
chr10	25899726	.	GA	G	511.16	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.238;DP=464;FS=0.798;HRun=8;HaplotypeScore=56.7608;InbreedingCoeff=0.8694;MQ=70.77;MQ0=0;MQRankSum=-0.079;QD=22.22;ReadPosRankSum=-2.179;VQSLOD=3.2198;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:78.24:0,78,942	0/0:4,0:4:12.04:0,12,145	0/0:14,0:14:36.11:0,36,429	0/0:12,0:11:17.98:0,18,183	0/0:23,0:23:66.20:0,66,797	0/0:12,0:12:36.11:0,36,435	0/0:6,0:6:18.06:0,18,217	1/1:0,19:19:57.06:538,57,0	0/0:16,0:16:45.14:0,45,544	0/0:24,0:24:63.19:0,63,761	0/0:19,0:19:51.15:0,51,606	0/0:11,1:12:4.12:0,4,333	0/0:14,0:14:39.12:0,39,471	0/0:10,0:10:27.08:0,27,326	0/0:8,0:8:24.07:0,24,290	0/0:6,0:6:15.05:0,15,181	1/1:1,3:4:9.01:87,9,0	0/0:12,0:12:33.10:0,33,399	0/0:33,1:34:58.18:0,58,927	0/0:34,0:34:99:0,99,1196	0/0:19,0:19:48.15:0,48,580	0/0:15,0:15:45.14:0,45,544	0/0:18,0:18:45.14:0,45,543	0/0:17,0:17:48.13:0,48,567	0/0:13,0:13:39.12:0,39,471	0/0:29,0:29:72.22:0,72,870	0/0:27,0:27:78.24:0,78,936	0/0:14,0:14:39.12:0,39,471
chr10	25900026	.	C	CGA	373.91	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.002;DP=505;FS=4.813;HRun=0;HaplotypeScore=66.5700;InbreedingCoeff=0.9466;MQ=67.77;MQ0=0;MQRankSum=-6.891;QD=21.99;ReadPosRankSum=-1.002;VQSLOD=3.3715;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:63.22:0,63,1027	0/0:7,0:7:21.07:0,21,343	0/0:7,0:8:13.16:0,13,198	0/0:6,0:6:8.99:0,9,108	0/0:26,0:26:78.25:0,78,1242	0/0:23,0:23:66.23:0,66,1075	0/0:19,0:19:54.17:0,54,854	1/1:0,11:11:33.08:354,33,0	0/0:26,0:26:78.26:0,78,1248	0/0:36,0:36:99:0,102,1642	0/0:15,0:15:42.13:0,42,659	0/0:19,0:19:57.19:0,57,926	0/0:27,0:27:78.26:0,78,1246	0/0:18,0:18:54.18:0,54,876	0/0:16,0:16:48.16:0,48,783	0/0:29,0:29:84.29:0,84,1368	1/1:0,6:6:17.91:140,18,0	0/0:7,0:7:21.07:0,21,342	0/0:26,0:26:78.26:0,78,1239	0/0:15,0:15:45.13:0,45,705	0/0:24,0:24:63.22:0,63,1028	0/0:15,0:15:45.15:0,45,734	0/0:17,0:17:51.17:0,51,790	0/0:11,0:11:33.11:0,33,538	0/0:14,0:14:42.14:0,42,683	0/0:33,0:33:96.32:0,96,1541	0/0:23,0:23:63.22:0,63,1028	0/0:6,0:6:18.04:0,18,266
chr10	25900034	.	TA	T	165.11	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.195;DP=488;FS=4.715;HRun=2;HaplotypeScore=54.1235;InbreedingCoeff=0.8781;MQ=68.70;MQ0=0;MQRankSum=-6.335;QD=9.71;ReadPosRankSum=-1.337;VQSLOD=0.9253;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:72.22:0,72,1057	0/0:6,0:6:18.06:0,18,270	0/0:6,1:7:5.59:0,6,134	0/0:5,0:5:6.02:0,6,90	0/0:27,0:27:78.26:0,78,1150	0/0:21,0:21:57.19:0,57,853	0/0:19,0:19:57.19:0,57,854	1/1:0,11:11:32.42:205,32,0	0/0:25,0:25:75.25:0,75,1124	0/0:30,0:30:90.30:0,90,1349	0/0:16,0:16:48.14:0,48,680	0/0:18,0:18:54.18:0,54,808	0/0:26,0:26:78.26:0,78,1167	0/0:17,0:17:51.13:0,51,739	0/0:18,0:18:54.18:0,54,809	0/0:29,0:29:87.28:0,87,1281	1/1:0,6:6:16.59:79,17,0	0/0:6,0:6:18.06:0,18,270	0/0:25,0:25:72.21:0,72,1023	0/0:16,0:16:48.16:0,48,719	0/0:25,0:25:75.20:0,75,1059	0/0:15,0:15:45.15:0,45,659	0/0:14,0:14:39.08:0,39,539	0/0:13,0:13:39.13:0,39,567	0/0:12,0:12:36.12:0,36,538	0/0:27,0:27:81.27:0,81,1207	0/0:25,0:25:69.23:0,69,1034	0/0:5,0:5:15.05:0,15,225
chr10	25900073	.	G	GACTATT	2293.61	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=1.275;DP=483;FS=26.267;HRun=0;HaplotypeScore=100.1306;InbreedingCoeff=0.8915;MQ=80.64;MQ0=0;MQRankSum=-7.841;QD=79.09;ReadPosRankSum=-3.004;VQSLOD=1.7256;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:51.17:0,51,1196	0/0:3,0:3:9.03:0,9,216	0/0:18,0:18:48.16:0,48,1018	0/0:20,0:20:51.12:0,51,1064	0/0:22,0:22:57.17:0,57,1275	0/0:18,0:18:45.15:0,45,1066	0/0:15,0:15:45.15:0,45,1082	1/1:14,8:22:54.19:1852,54,0	0/0:28,0:28:84.29:0,84,1995	0/0:21,0:21:60.21:0,60,1427	0/0:17,0:17:45.15:0,45,1082	0/0:21,0:21:60.18:0,60,1326	0/0:20,0:20:60.19:0,60,1393	0/0:16,0:16:45.11:0,45,1001	0/0:24,0:24:69.19:0,69,1560	0/0:23,0:23:63.19:0,63,1399	1/1:3,4:7:18.03:561,18,0	0/0:4,0:4:9.03:0,9,216	0/0:23,0:23:66.22:0,66,1544	0/0:24,0:24:72.22:0,72,1613	0/0:24,0:24:69.24:0,69,1634	0/0:14,0:14:42.11:0,42,915	0/0:13,0:13:39.12:0,39,890	0/0:12,0:12:30.10:0,30,721	0/0:9,0:9:27.09:0,27,649	0/0:20,0:20:57.18:0,57,1288	0/0:24,0:24:63.22:0,63,1487	0/0:3,0:3:6.02:0,6,144
chr10	25900139	.	C	CT	1731.56	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.587;DP=506;FS=1.296;HRun=1;HaplotypeScore=50.8814;InbreedingCoeff=0.9017;MQ=89.38;MQ0=0;MQRankSum=-5.936;QD=40.27;ReadPosRankSum=-2.828;VQSLOD=2.9972;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:57.19:0,57,739	0/0:4,0:4:12.04:0,12,156	0/0:21,0:21:57.15:0,57,695	0/0:21,0:21:56.98:0,57,726	0/0:14,0:14:39.13:0,39,506	0/0:20,0:20:60.19:0,60,779	0/0:13,0:13:39.13:0,39,506	1/1:2,28:30:87.25:1269,87,0	0/0:21,0:21:63.19:0,63,804	0/0:25,0:25:72.23:0,72,924	0/0:8,0:8:24.08:0,24,311	0/0:23,0:23:66.21:0,66,855	0/0:15,0:15:45.15:0,45,584	0/0:16,0:16:48.16:0,48,623	0/0:27,0:27:81.22:0,81,1008	0/0:21,0:21:63.20:0,63,818	1/1:0,13:13:39.13:584,39,0	0/0:10,0:10:30.10:0,30,389	0/0:24,0:24:72.22:0,72,910	0/0:24,0:24:72.22:0,72,921	0/0:30,0:30:87.27:0,87,1115	0/0:11,0:11:33.11:0,33,428	0/0:15,0:15:42.14:0,42,545	0/0:13,0:13:39.13:0,39,506	0/0:14,0:14:42.14:0,42,545	0/0:22,0:22:63.20:0,63,818	0/0:28,0:28:81.26:0,81,1051	0/0:2,0:2:3.01:0,3,39
chr10	25901015	.	G	GAC	2233.91	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-7.933;DP=698;FS=1.247;HRun=0;HaplotypeScore=176.7694;InbreedingCoeff=0.9763;MQ=64.43;MQ0=2;MQRankSum=-7.623;QD=36.03;ReadPosRankSum=-2.401;VQSLOD=4.0547;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:59,0:59:99:0,159,2404	0/0:4,0:4:12.04:0,12,184	0/0:33,0:32:84.24:0,84,1214	0/0:31,0:29:48.72:0,49,1057	0/0:27,0:25:69.23:0,69,1054	0/0:21,0:21:63.18:0,63,918	0/0:18,0:18:54.17:0,54,805	1/1:10,20:20:57.20:1093,57,0	0/0:20,0:20:60.20:0,60,918	0/0:37,0:36:99:0,111,1679	0/0:28,0:28:81.26:0,81,1215	0/0:15,0:14:42.12:0,42,601	0/0:25,0:25:66.22:0,66,1010	0/0:26,0:26:78.23:0,78,1144	0/0:23,0:23:66.22:0,66,1010	0/0:12,0:12:36.12:0,36,551	1/1:1,31:31:66.23:1262,66,0	0/0:19,0:19:57.17:0,57,848	0/0:20,0:19:57.17:0,57,830	0/0:35,0:35:96.30:0,96,1422	0/0:35,0:35:99:0,99,1513	0/0:28,0:28:78.22:0,78,1148	0/0:28,0:26:75.19:0,75,1094	0/0:12,0:12:36.12:0,36,550	0/0:22,0:22:63.20:0,63,941	0/0:28,0:28:81.07:0,81,1144	0/0:25,0:25:75.25:0,75,1147	0/0:5,0:5:15.05:0,15,229
chr10	25902127	.	C	CA	946.15	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-4.175;DP=586;FS=5.733;HRun=6;HaplotypeScore=55.8507;InbreedingCoeff=0.9693;MQ=55.38;MQ0=8;MQRankSum=-4.258;QD=25.57;ReadPosRankSum=-2.775;VQSLOD=2.5844;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:54.12:0,54,551	0/0:7,0:7:21.05:0,21,214	0/0:19,0:7:15.02:0,15,152	0/0:18,0:11:18.03:0,18,182	0/0:45,0:45:99:0,120,1209	0/0:20,0:20:57.13:0,57,582	0/0:15,0:15:33.07:0,33,337	1/1:7,19:23:54.15:653,54,0	0/0:25,0:25:66.11:0,66,657	0/0:29,0:29:78.16:0,78,790	0/0:32,0:31:81.18:0,81,826	0/0:13,0:13:33.08:0,33,337	0/0:17,0:17:42.09:0,42,428	0/0:15,0:15:33.07:0,33,337	0/0:24,0:24:63.13:0,63,636	0/0:21,0:21:51.09:0,51,512	1/1:0,11:11:33.11:415,33,0	0/0:20,0:21:42.67:0,43,498	0/0:15,0:11:27.06:0,27,276	0/0:28,0:28:78.18:0,78,796	0/0:24,0:24:45.08:0,45,459	0/0:20,0:20:45.10:0,45,459	0/0:20,0:20:54.12:0,54,551	0/0:22,0:22:44.32:0,44,511	0/0:19,0:19:39.07:0,39,392	0/0:17,0:17:51.12:0,51,520	0/0:40,0:40:99:0,99,1009	0/0:4,0:4:12.03:0,12,122
chr10	25902938	.	GT	G	1037.79	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.392;DP=483;FS=0.000;HRun=1;HaplotypeScore=45.3536;InbreedingCoeff=0.9715;MQ=59.97;MQ0=12;MQRankSum=3.644;QD=25.94;ReadPosRankSum=1.905;VQSLOD=3.4703;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,40:39:81.27:1133,81,0	0/0:8,0:8:24.08:0,24,383	0/0:13,0:7:21.07:0,21,335	0/0:14,0:13:24.12:0,24,470	0/0:22,0:22:48.16:0,48,765	0/0:15,0:15:42.14:0,42,668	0/0:8,0:7:18.06:0,18,277	0/0:30,0:22:63.21:0,63,979	0/0:26,0:26:60.20:0,60,954	0/0:19,0:19:57.19:0,57,890	0/0:20,0:20:45.01:0,45,682	0/0:9,0:9:27.09:0,27,432	0/0:9,0:9:24.01:0,24,384	0/0:9,0:9:24.08:0,24,384	0/0:16,0:16:36.12:0,36,576	0/0:11,0:11:30.09:0,30,457	0/0:12,0:12:33.10:0,33,504	0/0:11,0:11:27.09:0,27,429	0/0:19,0:11:26.43:0,26,472	0/0:22,0:21:57.18:0,57,872	0/0:10,0:10:21.07:0,21,330	0/0:22,0:22:51.17:0,51,812	0/0:22,0:22:57.19:0,57,911	0/0:19,0:19:53.17:0,53,793	0/0:18,0:18:30.10:0,30,479	0/0:23,0:23:66.23:0,66,1054	0/0:25,0:25:66.22:0,66,1047	0/0:11,0:11:30.10:0,30,479
chr10	25904693	.	A	AAT	18089.18	PASS	AB=0.533;AC=43;AF=0.768;AN=56;BaseQRankSum=-12.218;DP=562;FS=0.000;HRun=0;HaplotypeScore=55.5383;InbreedingCoeff=0.9143;MQ=55.91;MQ0=23;MQRankSum=6.039;QD=43.69;ReadPosRankSum=4.669;VQSLOD=6.5464;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:63.21:0,63,881	1/1:0,6:6:15.05:270,15,0	0/0:19,0:11:33.08:0,33,422	0/0:23,0:9:20.55:0,21,254	1/1:3,27:32:72.25:1291,72,0	1/1:0,17:18:39.13:702,39,0	1/1:2,8:10:24.08:432,24,0	0/0:39,0:32:87.27:0,87,1186	1/1:1,15:16:39.13:702,39,0	1/1:2,19:20:54.19:973,54,0	1/1:3,20:25:51.17:917,51,0	1/1:0,14:14:39.13:700,39,0	1/1:1,15:16:36.12:648,36,0	1/1:1,22:23:60.21:1080,60,0	0/0:18,0:18:39.13:0,39,544	1/1:1,12:13:36.12:648,36,0	0/0:25,0:25:69.13:0,69,899	1/1:2,16:17:22.28:732,22,0	1/1:3,10:12:30.08:481,30,0	1/1:0,38:38:99:1946,114,0	1/1:0,18:18:54.19:972,54,0	1/1:1,13:15:30.10:514,30,0	1/1:2,31:32:87.21:1527,87,0	0/1:1,7:8:1.67:354,0,2	1/1:0,14:13:39.13:702,39,0	1/1:2,24:27:75.24:1312,75,0	1/1:2,27:27:60.21:1079,60,0	1/1:0,4:4:6.02:108,6,0
chr10	25905972	.	GGTGACAGCAC	G	239.04	PASS	AB=0.533;AC=7;AF=0.318;AN=22;BaseQRankSum=4.249;DP=261;FS=1.718;HRun=0;HaplotypeScore=48.9617;InbreedingCoeff=0.5037;MQ=43.15;MQ0=12;MQRankSum=-3.468;QD=7.97;ReadPosRankSum=-1.380;VQSLOD=0.9397;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:43,0:14:39.13:0,39,1839	0/0:34,0:23:65.99:0,66,2282	./.	./.	./.	0/0:32,0:30:89.81:0,90,4302	./.	./.	0/0:0,6:1:0:0,0,0	1/1:0,5:3:3.01:104,3,0	./.	1/1:0,12:4:3.01:104,3,0	0/0:18,0:18:51.18:0,51,2763	./.	0/0:23,0:23:69.24:0,69,3651	0/0:1,1:1:3.01:0,3,107	1/1:0,5:4:8.91:62,9,0	./.	./.	./.	./.	./.	./.	0/1:1,7:5:67.85:68,0,100	./.	./.
chr10	25907424	.	C	CATAT	2756.44	PASS	AB=0.682;AC=5;AF=0.089;AN=56;BaseQRankSum=-6.543;DP=534;FS=0.581;HRun=0;HaplotypeScore=101.7666;InbreedingCoeff=0.7734;MQ=80.18;MQ0=1;MQRankSum=-4.388;QD=37.76;ReadPosRankSum=0.175;VQSLOD=3.4853;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:87.30:0,87,1513	0/0:10,0:10:30.10:0,30,522	0/0:27,0:26:43.61:0,44,641	0/0:20,0:20:36:0,36,561	0/0:28,0:28:72.23:0,72,1224	0/0:19,0:19:57.18:0,57,958	0/0:16,0:16:45.12:0,45,717	1/1:10,14:24:42.14:1065,42,0	0/0:25,0:25:51.17:0,51,887	0/0:23,0:23:57.19:0,57,968	0/0:14,0:14:36.12:0,36,612	0/0:12,0:12:24.08:0,24,410	0/0:14,0:14:33.11:0,33,574	0/0:11,0:11:33.11:0,33,574	0/1:8,0:15:63.07:63,0,79	0/0:6,0:6:15.05:0,15,261	1/1:6,26:34:72.03:1758,72,0	0/0:20,0:20:45.15:0,45,782	0/0:14,0:14:36.12:0,36,626	0/0:14,0:14:36.11:0,36,598	0/0:23,0:23:57.14:0,57,932	0/0:10,0:10:30.10:0,30,521	0/0:12,0:12:33.10:0,33,546	0/0:22,0:22:48.15:0,48,801	0/0:21,0:21:54.18:0,54,939	0/0:22,0:22:60.21:0,60,1037	0/0:29,0:29:69.20:0,69,1145	0/0:12,0:12:36.12:0,36,626
chr10	25907965	.	A	AG	11892.34	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=1.044;DP=298;FS=27.719;HRun=0;HaplotypeScore=96.7191;InbreedingCoeff=0.9169;MQ=52.77;MQ0=1;MQRankSum=-3.770;QD=43.09;ReadPosRankSum=3.546;VQSLOD=2.8022;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,13:14:35.42:573,35,0	1/1:0,6:6:18.06:287,18,0	0/0:13,0:11:27.01:0,27,353	0/0:9,0:8:21.06:0,21,270	1/1:1,10:11:30.10:477,30,0	1/1:0,12:12:33.11:525,33,0	1/1:0,5:5:15.05:231,15,0	1/1:2,19:16:45.13:665,45,0	1/1:0,8:8:24.08:382,24,0	1/1:1,14:15:45.13:690,45,0	1/1:0,16:16:48.16:736,48,0	1/1:0,9:9:27.09:429,27,0	1/1:0,7:7:21.07:325,21,0	1/1:0,12:12:33.11:525,33,0	1/1:1,10:11:24.08:382,24,0	1/1:1,4:5:12.04:191,12,0	1/1:2,9:11:33:470,33,0	1/1:0,5:5:15.05:231,15,0	1/1:1,10:11:33.11:526,33,0	1/1:0,17:17:45.08:687,45,0	1/1:0,13:13:33.11:526,33,0	1/1:0,7:7:18.06:287,18,0	1/1:0,17:17:48.16:761,48,0	1/1:0,4:4:9.03:130,9,0	1/1:0,7:7:21.07:334,21,0	1/1:0,14:14:42.14:670,42,0	1/1:0,13:13:39.13:620,39,0	1/1:0,5:5:15.05:234,15,0
chr10	25907983	.	G	GTTTTTTTTGTT	19890.76	PASS	AB=0.912;AC=48;AF=0.857;AN=56;BaseQRankSum=-4.414;DP=265;FS=14.750;HRun=0;HaplotypeScore=114.0746;InbreedingCoeff=0.6136;MQ=46.57;MQ0=2;MQRankSum=-3.422;QD=82.53;ReadPosRankSum=2.638;VQSLOD=4.2369;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,1:8:15.04:296,15,0	1/1:2,3:6:15.05:796,15,0	0/0:10,0:4:8.85:0,9,61	0/1:6,0:4:3.17:3,0,34	1/1:3,6:12:33.11:1218,33,0	1/1:7,4:14:33.10:1316,33,0	1/1:0,1:2:6.02:300,6,0	0/1:11,0:10:15.82:16,0,107	1/1:2,7:8:24.08:1188,24,0	1/1:6,7:16:48.16:2081,48,0	1/1:5,5:14:33.11:1324,33,0	1/1:3,3:7:21.07:842,21,0	1/1:6,4:10:27.09:1030,27,0	1/1:4,7:14:33.11:1389,33,0	0/0:7,0:7:11.97:0,12,162	1/1:0,4:4:12.04:660,12,0	0/0:7,0:7:10.52:0,11,139	1/1:1,1:2:5.98:185,6,0	1/1:9,0:12:27.03:576,27,0	1/1:3,5:14:36.11:1264,36,0	1/1:7,0:10:9.02:95,9,0	1/1:1,1:4:9.03:336,9,0	1/1:1,9:14:39.12:1707,39,0	1/1:1,0:3:6.02:69,6,0	1/1:3,1:6:12.04:368,12,0	1/1:4,3:12:33.11:1369,33,0	1/1:5,4:15:39.09:1156,39,0	1/1:1,0:5:15.05:307,15,0
chr10	25907990	.	TG	T	1727.85	PASS	AB=1.000;AC=48;AF=0.857;AN=56;BaseQRankSum=4.966;DP=240;FS=6.794;HRun=1;HaplotypeScore=118.3965;InbreedingCoeff=0.1213;MQ=45.24;MQ0=5;MQRankSum=-2.106;QD=7.48;ReadPosRankSum=1.546;VQSLOD=0.8306;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:9,0:7:3.35:36,0,3	1/1:5,0:5:4:22,4,0	0/0:9,0:3:8.79:0,9,63	0/1:6,0:4:0.44:0,0,26	1/1:11,0:11:9.82:58,10,0	0/1:14,0:13:2.37:60,0,2	1/1:2,0:2:4.59:15,5,0	1/1:8,6:9:23.74:264,24,0	1/1:9,0:8:17.98:62,18,0	0/1:17,0:16:42.57:52,0,43	1/1:14,0:13:26.98:104,27,0	1/1:8,0:7:0.65:41,1,0	0/1:8,0:8:8.63:28,0,9	1/1:12,0:12:14.78:81,15,0	1/1:0,5:5:12.04:157,12,0	1/1:5,0:5:8.70:26,9,0	1/1:1,5:6:15.01:179,15,0	1/1:2,0:2:5:26,5,0	0/1:9,0:9:21.58:55,0,22	1/1:12,0:12:29.89:121,30,0	1/1:4,0:4:8.63:45,9,0	1/1:3,0:3:5.60:17,6,0	1/1:14,0:14:30.65:115,31,0	1/1:3,0:3:3.79:18,4,0	1/1:5,0:5:10.39:44,10,0	1/1:14,0:11:9.86:50,10,0	1/1:15,0:14:28.23:125,28,0	1/1:5,0:5:12.30:58,12,0
chr10	25908000	.	T	TG	1071.68	PASS	AB=0.885;AC=31;AF=0.574;AN=54;BaseQRankSum=7.788;DP=218;FS=10.960;HRun=0;HaplotypeScore=103.2874;InbreedingCoeff=0.3481;MQ=36.58;MQ0=26;MQRankSum=-0.566;QD=6.53;ReadPosRankSum=3.281;VQSLOD=2.9588;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:4:6.84:0,7,58	1/1:5,1:5:8.84:55,9,0	0/0:7,0:1:2.97:0,3,20	0/0:3,0:1:2.60:0,3,10	1/1:9,2:9:15.97:73,16,0	1/1:10,1:10:13.87:67,14,0	1/1:3,1:2:5.05:45,5,0	0/0:12,0:10:26.47:0,26,166	1/1:8,0:7:13.78:39,14,0	0/1:14,3:16:57.35:117,0,57	1/1:10,3:12:19.21:145,19,0	0/1:7,1:6:4.97:47,0,5	0/1:9,0:8:10.71:11,0,38	1/1:10,0:10:15.15:43,15,0	0/0:6,0:6:14.79:0,15,95	1/1:5,0:5:8.15:23,8,0	0/0:8,0:5:14.79:0,15,95	0/1:3,0:2:0.80:1,0,14	0/0:7,0:6:6.86:0,7,41	0/1:10,2:10:13.72:85,0,14	0/0:2,0:1:2.92:0,3,17	1/1:2,1:2:4.83:44,5,0	1/1:12,1:11:21.34:88,21,0	./.	1/1:3,1:3:5.05:45,5,0	1/1:8,5:10:3.41:196,3,0	0/1:9,2:10:1.02:86,0,1	0/1:2,1:2:21.71:34,0,22
chr10	25908001	.	T	TA	3761.86	PASS	AB=0.750;AC=43;AF=0.768;AN=56;BaseQRankSum=4.187;DP=219;FS=7.126;HRun=2;HaplotypeScore=93.4326;InbreedingCoeff=0.5748;MQ=35.82;MQ0=30;MQRankSum=-2.497;QD=20.90;ReadPosRankSum=2.516;VQSLOD=3.4269;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,0:4:2.23:28,2,0	1/1:3,4:5:12.92:159,13,0	0/0:7,0:1:0.47:0,0,1	0/0:3,0:1:3.01:0,3,30	1/1:5,6:9:18.96:215,19,0	1/1:1,10:10:24.96:317,25,0	1/1:3,1:2:4.26:42,4,0	0/0:12,0:10:23.58:0,24,151	1/1:0,8:7:21.07:273,21,0	1/1:4,12:16:8.49:363,8,0	1/1:4,8:11:17.71:202,18,0	1/1:3,4:6:16.82:182,17,0	1/1:3,6:8:20.81:256,21,0	1/1:1,9:10:24.08:313,24,0	0/0:6,0:6:14.71:0,15,90	1/1:0,5:5:12.04:157,12,0	0/0:8,0:5:14.76:0,15,94	1/1:2,1:2:5.99:60,6,0	0/1:4,2:5:5.98:90,0,6	1/1:6,5:9:23.47:240,23,0	1/1:2,0:1:2.96:19,3,0	1/1:3,1:2:3.90:41,4,0	1/1:4,10:11:26.60:351,27,0	1/1:2,0:1:2.97:20,3,0	1/1:2,2:3:4.26:42,4,0	1/1:9,5:10:19.80:190,20,0	1/1:5,6:10:19.33:200,19,0	0/0:3,0:2:1.58:0,2,18
chr10	25909029	.	A	AT	373.45	PASS	AC=12;AF=1.000;AN=12;DP=82;FS=0.000;HRun=1;HaplotypeScore=19.9106;MQ=42.32;MQ0=29;QD=24.90;VQSLOD=3.4225;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	1/1:0,1:1:3.01:42,3,0	./.	./.	1/1:0,3:2:6.02:85,6,0	./.	./.	./.	./.	./.	1/1:0,1:1:3.01:42,3,0	./.	./.	./.	./.	./.	./.	1/1:1,0:1:2.99:24,3,0	./.	./.	./.	1/1:2,5:7:15.05:207,15,0	./.	./.	./.	./.	1/1:0,2:1:3.01:42,3,0	./.
chr10	25912632	.	T	TC	132.30	PASS	AB=0.939;AC=6;AF=0.75;AN=8;BaseQRankSum=-1.016;DP=52;FS=5.076;HRun=1;HaplotypeScore=69.2671;MQ=173.04;MQ0=1;MQRankSum=-0.215;QD=2.65;ReadPosRankSum=-0.092;VQSLOD=-0.6636;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/1:24,0:13:47.98:48,0,52	0/1:20,1:14:41.03:41,0,105	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	1/1:0,2:2:5.99:68,6,0	./.	1/1:0,1:1:3.01:48,3,0	./.	./.	./.	./.	./.
chr10	25915928	.	C	CG	1072.20	PASS	AB=0.685;AC=18;AF=0.529;AN=34;BaseQRankSum=0.503;DP=157;FS=8.805;HRun=0;HaplotypeScore=29.3559;InbreedingCoeff=0.2168;MQ=48.52;MQ0=32;MQRankSum=-4.147;QD=14.89;ReadPosRankSum=4.563;VQSLOD=3.8630;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	1/1:0,2:2:6.02:92,6,0	0/0:26,0:15:38.44:0,38,443	0/0:25,0:11:29.18:0,29,332	0/1:4,6:6:21.53:167,0,22	0/0:1,1:1:3.01:0,3,35	./.	./.	./.	./.	./.	1/1:3,5:6:9.03:137,9,0	1/1:2,4:3:6.02:91,6,0	1/1:0,5:2:6.02:92,6,0	0/0:3,0:1:0:0,0,0	0/1:2,1:2:30.83:41,0,31	0/0:5,0:3:3.01:0,3,36	1/1:4,3:2:6.02:93,6,0	./.	./.	0/0:3,0:2:2.98:0,3,22	1/1:0,7:7:18.06:275,18,0	0/1:4,4:4:26.27:83,0,26	./.	./.	0/1:4,3:4:31.42:82,0,31	./.	1/1:4,2:4:3.01:47,3,0
chr10	25915934	.	G	GA	85.79	PASS	AB=0.858;AC=7;AF=0.194;AN=36;BaseQRankSum=-2.276;DP=235;FS=26.918;HRun=0;HaplotypeScore=34.1856;InbreedingCoeff=0.1049;MQ=39.68;MQ0=101;MQRankSum=0.375;QD=2.68;ReadPosRankSum=-3.602;VQSLOD=0.1006;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	0/0:4,0:2:6.02:0,6,75	0/0:26,0:15:44.37:0,44,554	0/0:26,0:11:30.07:0,30,372	0/0:14,0:6:15.01:0,15,153	0/0:4,0:1:2.92:0,3,17	./.	./.	1/1:3,1:1:3.01:47,3,0	./.	./.	0/1:11,1:6:35.34:35,0,89	0/0:6,0:3:6.02:0,6,67	0/0:7,0:2:6.02:0,6,72	1/1:3,1:1:3.01:34,3,0	0/0:6,0:2:5.99:0,6,64	0/0:7,0:3:2.98:0,3,21	0/0:9,0:2:6.02:0,6,82	./.	./.	0/1:2,1:2:35.83:41,0,36	0/0:9,0:7:18.05:0,18,202	0/1:8,1:4:35.53:36,0,78	./.	./.	0/0:7,0:4:8.99:0,9,93	./.	0/0:5,0:4:3.01:0,3,40
chr10	25920665	.	TG	T	1334.69	PASS	AC=4;AF=0.333;AN=12;BaseQRankSum=-1.374;DP=104;FS=0.000;HRun=3;HaplotypeScore=67.8457;MQ=74.73;MQ0=1;MQRankSum=-2.104;QD=31.04;ReadPosRankSum=0.713;VQSLOD=3.4763;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:17,0:5:7.55:0,8,159	0/0:24,0:13:32.97:0,33,429	./.	./.	./.	1/1:1,22:21:63.18:756,63,0	./.	./.	./.	./.	./.	./.	0/0:17,0:16:45.07:0,45,600	./.	1/1:0,20:20:54.17:669,54,0	./.	./.	./.	0/0:2,0:2:2.88:0,3,15	./.	./.	./.	./.	./.	./.	./.
chr10	25921388	.	AGTTGTTAAGAG	A	15216.10	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=13.379;DP=340;FS=278.815;HRun=0;HaplotypeScore=140.0630;InbreedingCoeff=0.8691;MQ=78.18;MQ0=0;MQRankSum=-13.584;QD=73.51;ReadPosRankSum=3.890;VQSLOD=0.3551;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,10:16:24.08:811,24,0	1/1:0,2:2:6.02:214,6,0	0/0:18,0:19:41.45:0,41,2474	0/0:30,0:30:60.79:0,61,3903	1/1:0,11:11:27.09:793,27,0	1/1:2,7:9:15.05:534,15,0	1/1:2,7:9:15.05:535,15,0	0/0:40,0:40:99:0,117,5798	1/1:5,12:17:33.11:1140,33,0	1/1:1,12:13:36.12:1285,36,0	1/1:0,9:9:24.08:780,24,0	1/1:2,9:11:27.09:926,27,0	1/1:2,5:7:15.05:534,15,0	1/1:2,9:11:21.07:748,21,0	0/0:24,0:24:72.25:0,72,3949	1/1:0,4:4:12.04:391,12,0	0/0:20,0:20:54.19:0,54,3019	1/1:1,4:5:9.03:321,9,0	1/1:2,10:12:27.05:717,27,0	1/1:1,8:9:24.08:817,24,0	1/1:1,9:10:27.09:644,27,0	1/1:2,6:8:12.04:428,12,0	1/1:0,12:12:36.12:1158,36,0	1/1:1,2:3:6.02:161,6,0	1/1:3,4:7:12.04:391,12,0	1/1:1,12:13:36.12:1285,36,0	1/1:2,6:8:15.05:498,15,0	1/1:0,1:1:3.01:107,3,0
chr10	25921764	.	T	TA	8756.79	PASS	AB=1.000;AC=47;AF=0.839;AN=56;BaseQRankSum=7.851;DP=373;FS=4.781;HRun=7;HaplotypeScore=53.7589;InbreedingCoeff=0.8225;MQ=82.16;MQ0=0;MQRankSum=-4.142;QD=27.62;ReadPosRankSum=4.148;VQSLOD=5.5076;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,13:14:36.11:435,36,0	1/1:1,6:7:18.05:214,18,0	0/0:8,0:8:14.93:0,15,143	0/1:17,0:17:80.63:88,0,81	1/1:3,16:19:45.14:544,45,0	1/1:3,18:21:48.15:580,48,0	1/1:0,4:4:9.03:109,9,0	0/0:27,0:27:63.03:0,63,590	1/1:2,12:14:33.10:399,33,0	1/1:2,15:17:45.14:543,45,0	1/1:3,18:21:48.15:580,48,0	1/1:1,6:7:18.06:217,18,0	1/1:0,7:7:21.06:254,21,0	1/1:2,3:5:9.03:109,9,0	0/0:7,0:7:15.02:0,15,145	1/1:2,6:8:18.06:217,18,0	0/0:14,0:14:33.05:0,33,319	1/1:0,13:13:30.09:362,30,0	1/1:6,14:20:42.13:506,42,0	1/1:3,12:15:36.11:435,36,0	1/1:1,8:9:24.07:290,24,0	1/1:0,9:9:18.01:201,18,0	1/1:3,13:16:30.09:362,30,0	1/1:1,10:11:30.09:362,30,0	1/1:3,9:12:21.06:254,21,0	1/1:2,15:17:45.14:543,45,0	1/1:1,22:23:63.19:757,63,0	1/1:1,10:11:33.10:398,33,0
chr10	25921968	.	T	TTGTGTGTGTG	9592.10	PASS	AB=0.780;AC=52;AF=0.929;AN=56;BaseQRankSum=-1.370;DP=585;FS=1.858;HRun=0;HaplotypeScore=188.5640;InbreedingCoeff=0.2541;MQ=66.53;MQ0=4;MQRankSum=0.338;QD=17.35;ReadPosRankSum=0.172;VQSLOD=4.1455;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:56,0:54:21.03:385,21,0	1/1:8,0:8:11.69:190,12,0	0/0:32,0:20:5.23:0,5,48	0/1:30,0:24:0:0,0,0	1/1:13,2:17:11.59:439,12,0	1/1:20,0:24:5.48:147,5,0	1/1:12,0:12:9.02:215,9,0	1/1:33,0:33:48.15:1043,48,0	1/1:12,5:17:6.02:286,6,0	1/1:24,0:24:26.96:709,27,0	1/1:23,0:22:15.05:555,15,0	1/1:6,0:9:3.01:90,3,0	1/1:19,0:19:18.06:389,18,0	1/1:9,5:15:12.04:482,12,0	0/1:5,0:23:63.04:63,0,125	1/1:8,1:9:6.02:197,6,0	1/1:16,7:24:8.58:346,9,0	1/1:13,6:20:9.03:447,9,0	1/1:16,0:13:15.05:347,15,0	1/1:9,0:11:2.15:10,2,0	1/1:21,0:30:3.01:104,3,0	1/1:17,0:16:15.05:370,15,0	1/1:12,0:12:6.02:236,6,0	1/1:19,0:19:15.03:337,15,0	1/1:16,0:16:14.48:467,14,0	1/1:30,0:30:52.62:1176,53,0	1/1:16,0:17:12.04:323,12,0	1/1:12,8:20:6.02:239,6,0
chr10	25923426	.	TCCTCTGGAAGAGCAGC	T	32455.29	PASS	AB=0.538;AC=45;AF=0.804;AN=56;BaseQRankSum=11.510;DP=499;FS=18.344;HRun=0;HaplotypeScore=239.2370;InbreedingCoeff=0.8410;MQ=58.48;MQ0=1;MQRankSum=-13.751;QD=83.43;ReadPosRankSum=6.670;VQSLOD=3.0962;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:5,30:35:20.27:3313,0,20	1/1:0,5:5:9.03:431,9,0	0/0:21,0:17:47.75:0,48,2610	0/0:23,0:21:63.16:0,63,3074	1/1:1,11:12:24.08:1065,24,0	1/1:0,13:13:27.09:1252,27,0	1/1:1,11:12:21.07:985,21,0	0/0:24,0:24:69.22:0,69,4040	1/1:4,17:21:39.13:1867,39,0	1/1:2,14:16:39.04:1521,39,0	1/1:1,7:8:9.03:408,9,0	1/1:2,21:23:48.16:2296,48,0	1/1:3,16:19:27.09:1272,27,0	1/1:1,16:17:42.14:2010,42,0	0/0:18,0:18:54.19:0,54,4161	1/1:2,22:24:51.18:2379,51,0	0/0:24,0:24:72.25:0,72,5419	1/1:1,5:6:12.04:575,12,0	1/1:6,7:12:20.87:511,21,0	1/1:4,15:19:33.11:1578,33,0	1/1:5,16:21:15.52:641,16,0	1/1:3,20:23:45.15:2117,45,0	1/1:2,9:11:21.07:968,21,0	1/1:4,12:16:9.50:432,10,0	1/1:1,10:11:18.06:841,18,0	1/1:3,16:19:42.01:1546,42,0	1/1:4,25:30:59.70:2870,60,0	1/1:1,14:15:33.11:1580,33,0
chr10	25924153	.	C	CT	11414.16	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=1.696;DP=470;FS=3.604;HRun=6;HaplotypeScore=77.3148;InbreedingCoeff=0.9688;MQ=81.72;MQ0=0;MQRankSum=-3.697;QD=30.52;ReadPosRankSum=5.301;VQSLOD=5.2213;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,22:24:63.16:772,63,0	1/1:0,9:9:27.08:331,27,0	0/0:15,0:15:30.05:0,30,299	0/0:19,0:20:20.88:0,21,253	1/1:2,18:20:7.81:422,8,0	1/1:6,22:27:63.20:792,63,0	1/1:1,7:8:21.07:264,21,0	0/0:30,0:30:72.14:0,72,728	1/1:1,20:21:54.17:677,54,0	1/1:0,16:16:45.12:551,45,0	1/1:2,16:18:42.09:510,42,0	1/1:1,11:12:33.11:415,33,0	1/1:2,9:11:30.10:376,30,0	1/1:0,13:13:39.12:490,39,0	0/0:15,0:15:39.09:0,39,395	1/1:0,11:11:33.11:415,33,0	0/0:16,0:16:45.10:0,45,458	1/1:2,4:6:14.53:160,15,0	1/1:5,23:28:72.23:901,72,0	1/1:3,23:26:66.21:830,66,0	1/1:1,8:9:24.08:302,24,0	1/1:4,17:21:38.89:415,39,0	1/1:1,24:25:32.20:703,32,0	1/1:2,5:7:12.04:151,12,0	1/1:0,16:16:42.09:506,42,0	1/1:2,15:17:42.13:528,42,0	1/1:1,14:15:39.12:490,39,0	1/1:0,13:13:33.11:412,33,0
chr10	25924626	.	CA	C	17686.10	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=10.135;DP=701;FS=4.223;HRun=2;HaplotypeScore=84.9850;InbreedingCoeff=0.9998;MQ=81.82;MQ0=0;MQRankSum=-6.657;QD=34.34;ReadPosRankSum=5.796;VQSLOD=4.9860;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:57:99:0,166,2446	1/1:0,17:17:51.17:661,51,0	0/0:19,0:19:57.16:0,57,813	0/0:30,0:30:83.64:0,84,1183	1/1:1,30:31:78.23:994,78,0	1/1:0,12:12:30.10:389,30,0	1/1:0,16:16:39.13:506,39,0	0/0:30,0:30:90.28:0,90,1297	1/1:0,26:26:69.22:895,69,0	1/1:0,30:30:87.26:1107,87,0	1/1:0,23:23:57.19:738,57,0	1/1:0,15:15:45.15:583,45,0	1/1:1,18:19:57.17:725,57,0	1/1:0,24:24:69.22:895,69,0	0/0:20,0:20:54.16:0,54,785	1/1:1,24:25:63.20:816,63,0	0/0:30,0:30:87.29:0,87,1303	1/1:0,12:12:33.11:428,33,0	1/1:1,22:23:60.19:777,60,0	1/1:1,24:25:63.12:794,63,0	1/1:0,40:40:99:1479,114,0	1/1:0,31:31:72.23:931,72,0	1/1:0,21:21:60.19:773,60,0	1/1:0,27:27:63.20:818,63,0	1/1:0,22:22:63.20:812,63,0	1/1:0,25:25:69.10:853,69,0	1/1:0,39:39:99:1282,99,0	1/1:0,12:12:33.11:428,33,0
chr10	25925083	.	TG	T	32825.18	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=7.019;DP=948;FS=13.543;HRun=1;HaplotypeScore=153.1795;InbreedingCoeff=0.9998;MQ=68.51;MQ0=0;MQRankSum=-8.246;QD=38.26;ReadPosRankSum=6.458;VQSLOD=2.5198;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,16:16:45.15:629,45,0	1/1:0,22:22:60.20:838,60,0	0/0:19,0:19:57.19:0,57,897	0/0:22,0:22:66.22:0,66,1011	1/1:0,66:66:99:2608,195,0	1/1:0,39:39:99:1353,105,0	1/1:0,29:29:81.13:1084,81,0	0/0:22,0:22:63.19:0,63,947	1/1:0,40:40:99:1527,111,0	1/1:1,50:51:99:2075,153,0	1/1:0,40:40:99:1476,114,0	1/1:0,29:29:84.21:1149,84,0	1/1:0,23:23:69.15:920,69,0	1/1:1,34:35:96.16:1259,96,0	0/0:17,0:17:51.16:0,51,791	1/1:0,23:23:66.12:877,66,0	0/0:10,0:10:30.09:0,30,455	1/1:0,12:12:36.12:503,36,0	1/1:0,45:45:99:1834,135,0	1/1:0,39:39:99:1521,111,0	1/1:0,43:43:99:1593,114,0	1/1:0,42:42:99:1586,120,0	1/1:0,52:52:99:2009,147,0	1/1:0,20:20:57.16:777,57,0	1/1:0,44:44:99:1760,126,0	1/1:0,49:49:99:1995,147,0	1/1:0,52:52:99:1966,144,0	1/1:1,46:47:99:1486,108,0
chr10	25925277	.	G	GA	29461.92	PASS	AB=1.000;AC=47;AF=0.839;AN=56;BaseQRankSum=7.057;DP=920;FS=1.029;HRun=5;HaplotypeScore=222.9495;InbreedingCoeff=0.8675;MQ=66.52;MQ0=0;MQRankSum=-4.979;QD=34.30;ReadPosRankSum=4.828;VQSLOD=1.5945;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,22:23:60.20:789,60,0	1/1:1,9:10:27.09:355,27,0	0/0:14,0:14:33.04:0,33,321	0/1:10,0:11:22.21:22,0,124	1/1:3,40:43:99:1421,111,0	1/1:2,49:51:99:1815,138,0	1/1:2,24:26:72.19:928,72,0	0/0:17,0:17:45.11:0,45,478	1/1:1,38:39:99:1382,105,0	1/1:5,48:53:99:1811,141,0	1/1:1,33:34:87.27:1130,87,0	1/1:7,32:39:93.30:1224,93,0	1/1:2,24:26:72.23:947,72,0	1/1:4,39:43:99:1538,117,0	0/0:21,0:21:63.16:0,63,676	1/1:2,27:29:81.26:1066,81,0	0/0:9,0:9:24.06:0,24,258	1/1:2,11:13:33.11:434,33,0	1/1:8,40:48:99:1587,123,0	1/1:3,33:36:93.30:1222,93,0	1/1:2,39:41:99:1460,111,0	1/1:2,36:38:99:1341,102,0	1/1:4,34:38:99:1283,99,0	1/1:2,28:30:78.25:1026,78,0	1/1:3,26:29:66.21:868,66,0	1/1:3,37:40:99:1473,114,0	1/1:8,76:85:99:2997,229,0	1/1:0,34:34:99:1342,102,0
chr10	25932174	.	A	AT	10004.67	PASS	AB=1.000;AC=45;AF=0.804;AN=56;BaseQRankSum=-8.474;DP=364;FS=7.108;HRun=0;HaplotypeScore=64.5895;InbreedingCoeff=0.8148;MQ=65.12;MQ0=2;MQRankSum=-2.238;QD=32.38;ReadPosRankSum=4.622;VQSLOD=4.3396;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:17,0:17:39.51:40,0,53	1/1:0,11:11:24.08:350,24,0	0/0:14,0:8:19.21:0,19,154	0/0:10,0:6:12.36:0,12,101	1/1:1,17:18:45.08:629,45,0	1/1:1,10:11:18.06:263,18,0	1/1:0,5:5:12.04:175,12,0	0/0:16,0:14:37.35:0,37,178	1/1:1,11:12:18.76:383,19,0	1/1:1,13:14:42.14:602,42,0	1/1:0,25:24:68.82:873,69,0	1/1:2,8:10:12.04:174,12,0	1/1:0,13:13:39.13:568,39,0	1/1:0,7:8:17.96:218,18,0	0/0:4,0:4:11.18:0,11,77	1/1:1,7:8:9.03:132,9,0	0/0:11,0:11:25.99:0,26,137	1/1:0,11:11:24.08:350,24,0	1/1:0,16:16:48.10:625,48,0	1/1:0,22:22:57:755,57,0	1/1:1,13:14:33.10:464,33,0	1/1:0,13:13:30.10:438,30,0	1/1:1,17:18:44.98:603,45,0	1/1:0,6:6:12.04:175,12,0	1/1:0,20:20:51.17:744,51,0	1/1:0,19:18:57.14:790,57,0	1/1:1,15:16:39.13:568,39,0	1/1:0,2:2:6.02:87,6,0
chr10	25933097	.	C	CAT	29277.51	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=5.269;DP=662;FS=8.439;HRun=0;HaplotypeScore=188.5720;InbreedingCoeff=0.9951;MQ=87.15;MQ0=0;MQRankSum=-11.898;QD=48.23;ReadPosRankSum=6.997;VQSLOD=4.0415;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,31:37:84.29:1619,84,0	1/1:3,13:16:39.07:706,39,0	0/0:27,0:27:53.97:0,54,1018	0/0:28,0:28:83.84:0,84,1195	1/1:4,28:32:72.25:1389,72,0	1/1:8,22:30:75.20:1342,75,0	1/1:4,16:20:48.16:896,48,0	1/1:0,21:21:63.20:1174,63,0	1/1:2,14:16:42.14:805,42,0	1/1:6,21:27:75.16:1367,75,0	1/1:4,28:32:78.27:1498,78,0	1/1:3,26:29:69.24:1333,69,0	1/1:1,21:23:66.23:1252,66,0	1/1:1,22:23:66.23:1272,66,0	1/1:5,16:21:51.16:941,51,0	1/1:0,14:14:39.13:752,39,0	1/1:1,22:23:51.17:981,51,0	1/1:0,6:6:18.06:347,18,0	1/1:4,14:18:51.10:911,51,0	1/1:4,38:43:99:2232,117,0	1/1:1,12:13:30.10:579,30,0	1/1:7,25:32:75.23:1411,75,0	1/1:8,21:29:69.22:1297,69,0	1/1:1,12:13:33.11:636,33,0	1/1:0,23:23:66.23:1272,66,0	1/1:4,22:26:72.24:1339,72,0	1/1:5,23:28:75.26:1385,75,0	1/1:5,7:12:30.09:544,30,0
chr10	25933144	.	ATT	A	10040.13	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=7.623;DP=516;FS=1.947;HRun=11;HaplotypeScore=196.6237;InbreedingCoeff=0.9659;MQ=70.49;MQ0=0;MQRankSum=-8.234;QD=22.66;ReadPosRankSum=4.316;VQSLOD=2.4590;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:32:51.83:227,52,0	1/1:6,8:14:26.93:271,27,0	0/0:17,0:16:18.24:0,18,380	0/0:13,0:12:7.80:0,8,151	1/1:7,16:23:39:400,39,0	1/1:5,18:23:54.07:560,54,0	1/1:6,13:19:39.07:412,39,0	0/0:21,0:21:44.85:0,45,403	1/1:2,12:14:39.01:400,39,0	1/1:1,13:14:39.09:415,39,0	1/1:4,20:24:62.83:620,63,0	1/1:5,17:22:57.92:576,58,0	1/1:4,10:14:32.92:324,33,0	1/1:6,19:25:54.06:560,54,0	1/1:3,1:23:26.43:268,26,0	1/1:4,7:11:21.87:213,22,0	0/0:22,0:22:45.09:0,45,457	1/1:0,7:7:17.93:191,18,0	1/1:6,13:19:37.32:386,37,0	1/1:6,23:29:76.85:786,77,0	1/1:3,7:10:20.92:187,21,0	1/1:1,19:20:57.08:593,57,0	1/1:1,18:19:54.13:571,54,0	1/1:5,6:11:15.03:159,15,0	1/1:4,12:17:38.99:391,39,0	1/1:2,20:22:60.15:638,60,0	1/1:2,21:23:63.15:670,63,0	1/1:0,8:8:21.05:223,21,0
chr10	25933152	.	TTTTA	T	478.41	PASS	AB=0.991;AC=24;AF=0.429;AN=56;BaseQRankSum=3.985;DP=504;FS=33.992;HRun=0;HaplotypeScore=240.9296;InbreedingCoeff=-0.4105;MQ=72.98;MQ0=0;MQRankSum=8.203;QD=1.29;ReadPosRankSum=7.440;VQSLOD=1.0112;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:25:33.38:100,0,33	0/1:10,0:10:23.78:41,0,24	0/0:20,0:19:43.48:0,43,798	0/1:13,0:12:11.81:12,0,323	0/1:20,0:20:7.09:7,0,130	0/1:21,0:21:0.42:0,0,74	0/0:15,0:15:4.65:0,5,71	0/0:23,0:23:69.16:0,69,1058	0/1:14,0:14:12.86:49,0,13	0/1:15,0:15:3:3,0,40	0/1:25,1:26:89.04:89,0,124	0/1:20,1:21:28.06:32,0,28	0/1:11,0:11:3.94:33,0,4	0/1:23,0:23:17.03:17,0,72	0/0:23,0:23:61.05:0,61,511	0/1:13,1:14:19.68:20,0,117	0/0:25,0:25:60.10:0,60,979	0/1:8,0:8:3.08:3,0,15	0/1:17,0:17:39.51:40,0,64	0/1:31,1:32:49.09:49,0,103	0/1:9,0:9:25.89:26,0,62	0/1:21,0:21:3.29:3,0,51	0/1:20,0:20:24.23:24,0,46	1/1:7,0:7:4.53:14,5,0	0/1:15,0:15:38.62:42,0,39	0/1:21,0:21:15.29:18,0,15	0/0:27,0:27:10.11:0,10,151	1/1:8,0:8:1.08:6,1,0
chr10	25933584	.	T	TA	14788.35	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-8.111;DP=520;FS=6.177;HRun=3;HaplotypeScore=56.2348;InbreedingCoeff=0.9933;MQ=82.68;MQ0=0;MQRankSum=-4.765;QD=35.21;ReadPosRankSum=6.174;VQSLOD=4.8558;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,23:24:63.21:868,63,0	1/1:1,7:8:15.05:207,15,0	0/0:17,0:17:44.27:0,44,532	0/0:15,0:15:44.16:0,44,501	1/1:3,31:34:87.01:1088,87,0	1/1:2,21:23:54.18:744,54,0	1/1:1,10:11:27.09:373,27,0	0/0:31,0:31:84.21:0,84,959	1/1:1,13:14:36.12:496,36,0	1/1:1,17:18:51.17:703,51,0	1/1:1,21:22:60.08:782,60,0	1/1:0,20:20:51.17:704,51,0	1/1:0,11:11:24.08:331,24,0	1/1:1,12:13:36.12:497,36,0	0/0:12,0:12:36.08:0,36,407	1/1:1,24:25:72.24:993,72,0	0/0:25,0:25:72.20:0,72,847	1/1:1,13:14:36.12:496,36,0	1/1:3,19:22:60.13:771,60,0	1/1:0,26:26:75.13:968,75,0	1/1:1,7:8:18.06:248,18,0	1/1:2,20:22:60.13:805,60,0	1/1:0,25:25:63.12:836,63,0	1/1:1,11:12:30.10:414,30,0	1/1:0,19:19:57.19:786,57,0	1/1:1,17:18:48.06:587,48,0	1/1:0,21:21:54.09:720,54,0	1/1:0,10:10:27.09:373,27,0
chr10	25934240	.	A	AT	13966.69	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=3.056;DP=554;FS=1.555;HRun=7;HaplotypeScore=103.3301;InbreedingCoeff=0.9982;MQ=86.10;MQ0=0;MQRankSum=-7.229;QD=29.91;ReadPosRankSum=4.943;VQSLOD=4.1829;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,27:27:75.23:906,75,0	1/1:2,11:13:30.09:362,30,0	0/0:17,0:17:32.93:0,33,307	0/0:22,0:22:54.02:0,54,506	1/1:4,20:24:31.21:660,31,0	1/1:0,17:17:45.14:544,45,0	1/1:1,11:12:33.06:382,33,0	0/0:20,0:20:48.06:0,48,459	1/1:1,27:28:78.24:942,78,0	1/1:2,20:21:60.18:724,60,0	1/1:1,20:21:34.21:696,34,0	1/1:1,18:19:45.14:540,45,0	1/1:4,18:22:28.47:620,28,0	1/1:2,9:11:30.09:361,30,0	0/0:13,0:13:36.05:0,36,348	1/1:2,14:16:42.13:507,42,0	0/0:15,0:15:39.06:0,39,377	1/1:2,8:10:21.06:254,21,0	1/1:0,17:18:54.01:616,54,0	1/1:4,30:34:79.08:927,79,0	1/1:0,20:20:57.17:689,57,0	1/1:6,18:24:51.16:614,51,0	1/1:3,20:23:54.64:653,55,0	1/1:1,11:12:30.09:362,30,0	1/1:4,27:31:72.22:870,72,0	1/1:7,15:22:45.14:543,45,0	1/1:1,27:27:60.18:725,60,0	1/1:0,13:13:39.12:471,39,0
chr10	25934494	.	C	CTA	21472.52	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-4.670;DP=608;FS=0.000;HRun=0;HaplotypeScore=81.8741;InbreedingCoeff=0.9707;MQ=74.48;MQ0=8;MQRankSum=-1.656;QD=41.94;ReadPosRankSum=4.035;VQSLOD=6.3503;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,22:28:60.21:1020,60,0	1/1:0,5:5:15.05:255,15,0	0/0:11,0:11:22.73:0,23,287	0/0:12,0:12:7.08:0,7,119	1/1:1,22:23:66.23:1123,66,0	1/1:5,6:12:15.05:255,15,0	1/1:3,13:16:36.12:613,36,0	0/0:24,0:24:54.16:0,54,679	1/1:1,26:27:75.26:1276,75,0	1/1:1,31:33:90.31:1508,90,0	1/1:2,29:31:81.19:1339,81,0	1/1:0,22:22:66.23:1123,66,0	1/1:3,15:18:45.15:750,45,0	1/1:1,18:18:51.17:868,51,0	0/0:24,0:24:66.21:0,66,847	1/1:2,24:26:63.22:1071,63,0	0/0:25,0:25:72.23:0,72,935	1/1:1,19:19:48.16:816,48,0	1/1:2,10:12:30.10:510,30,0	1/1:3,28:31:84.29:1429,84,0	1/1:3,27:30:75.26:1276,75,0	1/1:2,27:26:63.13:1036,63,0	1/1:2,16:17:39.13:663,39,0	1/1:3,22:24:60.21:1021,60,0	1/1:1,19:20:42.14:715,42,0	1/1:3,18:21:54.18:919,54,0	1/1:4,33:37:90.31:1530,90,0	1/1:2,7:8:21.07:357,21,0
chr10	25934709	.	CGA	C	19909.65	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=10.707;DP=544;FS=4.356;HRun=0;HaplotypeScore=107.7571;InbreedingCoeff=0.9958;MQ=82.49;MQ0=0;MQRankSum=-4.977;QD=44.54;ReadPosRankSum=7.489;VQSLOD=5.8750;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,29:29:78.27:1272,78,0	1/1:0,5:5:15.05:245,15,0	0/0:15,0:15:45.15:0,45,904	0/0:18,0:18:54.18:0,54,1059	1/1:0,23:23:54.18:881,54,0	1/1:0,16:16:45.15:734,45,0	1/1:0,11:11:27.09:441,27,0	0/0:31,0:31:93.32:0,93,1864	1/1:0,26:26:75.26:1224,75,0	1/1:0,24:24:72.25:1173,72,0	1/1:0,16:16:39.13:633,39,0	1/1:0,21:21:57.19:930,57,0	1/1:0,24:24:72.25:1173,72,0	1/1:0,16:16:39.13:636,39,0	0/0:17,0:17:51.18:0,51,1025	1/1:0,21:21:60.20:979,60,0	0/0:16,0:16:48.16:0,48,975	1/1:0,13:13:36.12:587,36,0	1/1:0,18:18:51.17:830,51,0	1/1:0,25:25:72.25:1173,72,0	1/1:0,23:23:66.23:1077,66,0	1/1:0,14:14:33.11:538,33,0	1/1:0,23:23:60.05:978,60,0	1/1:0,18:18:51.17:832,51,0	1/1:0,16:16:36.12:587,36,0	1/1:0,26:26:78.27:1273,78,0	1/1:0,29:29:75.26:1223,75,0	1/1:0,10:10:30.10:489,30,0
chr10	25937052	.	A	AT	16574.69	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=5.412;DP=665;FS=4.195;HRun=4;HaplotypeScore=145.5881;InbreedingCoeff=0.9889;MQ=54.22;MQ0=40;MQRankSum=3.386;QD=32.63;ReadPosRankSum=0.239;VQSLOD=2.9071;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:44:99:0,123,1383	1/1:1,9:10:27.09:362,27,0	0/0:21,0:7:18.04:0,18,198	0/0:19,0:6:12.03:0,12,136	1/1:5,31:35:80.94:1107,81,0	1/1:0,23:22:57.19:780,57,0	1/1:9,26:27:65.91:880,66,0	0/0:37,0:24:57.16:0,57,647	1/1:4,13:14:33.11:451,33,0	1/1:6,28:29:81.27:1107,81,0	1/1:1,23:24:32.45:828,32,0	1/1:2,16:18:42.14:575,42,0	1/1:7,15:20:39.13:533,39,0	1/1:3,19:22:51.17:698,51,0	1/1:1,20:21:48.16:656,48,0	1/1:0,21:21:60.20:821,60,0	0/0:35,0:35:99:0,105,1190	1/1:4,14:17:42.14:574,42,0	1/1:5,9:8:21.07:286,21,0	1/1:3,17:19:51.17:698,51,0	1/1:1,20:21:57.19:779,57,0	1/1:1,22:23:63.21:861,63,0	1/1:1,25:26:72.24:984,72,0	1/1:1,14:14:30.10:410,30,0	1/1:1,17:18:48.16:656,48,0	1/1:4,35:36:99:1379,102,0	1/1:3,20:23:60.20:820,60,0	1/1:0,8:8:24.08:328,24,0
chr10	25937413	.	A	AT	14723.47	PASS	AB=0.955;AC=51;AF=0.911;AN=56;BaseQRankSum=-5.354;DP=551;FS=4.506;HRun=7;HaplotypeScore=54.3757;InbreedingCoeff=0.8756;MQ=52.99;MQ0=6;MQRankSum=2.921;QD=28.26;ReadPosRankSum=3.757;VQSLOD=5.5644;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:42.06:0,42,405	1/1:0,8:8:24.07:290,24,0	0/0:13,0:10:24.04:0,24,231	0/1:19,1:12:1.58:2,0,190	1/1:2,27:29:81.25:978,81,0	1/1:1,17:18:51.16:616,51,0	1/1:0,12:11:33.10:398,33,0	1/1:5,15:14:30.07:348,30,0	1/1:2,18:20:48.15:580,48,0	1/1:2,21:23:63.18:748,63,0	1/1:3,25:28:44.22:706,44,0	1/1:2,13:15:33.10:399,33,0	1/1:0,19:19:54.17:652,54,0	1/1:1,14:15:33.10:399,33,0	1/1:1,21:22:63.19:761,63,0	1/1:4,13:17:36.11:435,36,0	1/1:3,23:26:60.18:725,60,0	1/1:4,18:20:39.12:471,39,0	1/1:0,7:7:21.06:254,21,0	1/1:2,26:28:72.22:870,72,0	1/1:1,17:18:42.13:507,42,0	1/1:2,17:19:51.11:600,51,0	1/1:0,22:22:66.20:797,66,0	1/1:4,14:17:36.11:435,36,0	1/1:1,20:21:48.15:580,48,0	1/1:2,27:29:78.20:906,78,0	1/1:3,24:27:63.19:761,63,0	1/1:1,16:17:42.13:507,42,0
chr10	25937672	.	A	AAT	2371.57	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-1.355;DP=670;FS=4.416;HRun=0;HaplotypeScore=79.1335;InbreedingCoeff=0.9943;MQ=58.13;MQ0=4;MQRankSum=-1.408;QD=39.53;ReadPosRankSum=-2.356;VQSLOD=4.6503;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:69.23:0,69,966	0/0:10,0:10:30.09:0,30,402	0/0:14,0:7:17.97:0,18,218	0/0:19,0:10:23.94:0,24,280	0/0:29,0:29:84.27:0,84,1156	0/0:18,0:18:54.17:0,54,738	0/0:17,0:17:42.13:0,42,570	1/1:4,25:26:57.15:928,57,0	0/0:27,0:27:66.19:0,66,902	0/0:24,0:24:66.22:0,66,923	0/0:27,0:27:81.27:0,81,1134	0/0:14,0:14:39.13:0,39,546	0/0:27,0:26:72.21:0,72,972	0/0:13,0:13:36.11:0,36,489	0/0:31,0:31:75.24:0,75,1033	0/0:23,0:23:51.16:0,51,699	1/1:0,31:31:87.30:1565,87,0	0/0:20,0:20:54.07:0,54,706	0/0:17,0:15:42.14:0,42,588	0/0:32,0:31:90.28:0,90,1240	0/0:28,0:28:78.24:0,78,1059	0/0:31,0:31:81.23:0,81,1111	0/0:30,0:30:84.25:0,84,1127	0/0:26,0:26:72.19:0,72,970	0/0:22,0:22:63.21:0,63,882	0/0:36,0:36:99:0,102,1399	0/0:37,0:35:99:0,102,1368	0/0:13,0:13:39.10:0,39,507
chr10	25937807	.	GT	G	503.72	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-2.779;DP=575;FS=3.282;HRun=3;HaplotypeScore=96.2922;InbreedingCoeff=0.9283;MQ=55.22;MQ0=11;MQRankSum=0.033;QD=26.51;ReadPosRankSum=1.472;VQSLOD=2.8129;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,17:19:11.04:589,11,0	0/0:14,0:14:39.13:0,39,562	0/0:11,0:4:12.04:0,12,172	0/0:19,0:12:33.11:0,33,463	0/0:17,0:17:48.16:0,48,690	0/0:29,0:28:84.28:0,84,1210	0/0:14,0:13:35.94:0,36,466	0/0:29,0:25:66.22:0,66,944	0/0:22,0:22:60.19:0,60,848	0/0:35,0:35:96.31:0,96,1365	0/0:21,0:21:54.18:0,54,778	0/0:14,0:14:42.14:0,42,604	0/0:21,0:21:63.20:0,63,886	0/0:10,0:10:30.10:0,30,420	0/0:27,0:27:81.27:0,81,1166	0/0:17,0:17:48.16:0,48,691	0/0:29,0:29:87.25:0,87,1213	0/0:18,0:18:48.16:0,48,691	0/0:20,0:20:54.18:0,54,778	0/0:20,0:20:60.20:0,60,864	0/0:25,0:24:69.23:0,69,994	0/0:17,0:16:45.15:0,45,646	0/0:14,0:14:39.13:0,39,561	0/0:25,0:25:75.21:0,75,1057	0/0:20,0:20:54.16:0,54,745	0/0:27,0:27:78.25:0,78,1102	0/0:33,0:33:96.32:0,96,1368	0/0:8,0:8:24.08:0,24,346
chr10	25937975	.	AT	A	8858.64	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-0.903;DP=475;FS=4.971;HRun=9;HaplotypeScore=77.7711;InbreedingCoeff=0.9698;MQ=69.31;MQ0=0;MQRankSum=-2.460;QD=23.50;ReadPosRankSum=5.738;VQSLOD=5.2837;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,1:20:21.89:0,22,481	1/1:2,8:10:18:165,18,0	0/0:13,0:13:36.10:0,36,404	0/0:13,0:13:26.95:0,27,292	1/1:1,28:29:65.93:593,66,0	1/1:1,21:22:60.03:549,60,0	1/1:1,11:12:30.02:275,30,0	0/0:27,0:27:66.02:0,66,440	1/1:3,10:13:30.01:275,30,0	1/1:0,12:12:36.02:329,36,0	1/1:3,16:19:42.02:384,42,0	1/1:0,16:16:48.03:439,48,0	1/1:1,10:11:30.02:275,30,0	1/1:0,16:16:42.02:384,42,0	1/1:0,18:18:54.03:494,54,0	1/1:2,9:11:21.01:192,21,0	0/0:25,0:24:58.13:0,58,327	1/1:3,4:7:5.89:55,6,0	1/1:3,16:18:48.01:435,48,0	1/1:0,25:25:69.03:631,69,0	1/1:0,9:9:24.01:220,24,0	1/1:1,20:21:57.02:522,57,0	1/1:0,22:22:63.03:576,63,0	1/1:0,7:7:21.01:192,21,0	1/1:0,21:21:51.03:467,51,0	1/1:2,12:14:36.02:329,36,0	1/1:2,24:26:69.04:632,69,0	1/1:0,16:17:50.06:445,50,0
chr10	25937984	.	T	TA	1624.25	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-10.505;DP=504;FS=3.555;HRun=2;HaplotypeScore=107.7505;InbreedingCoeff=0.9782;MQ=74.05;MQ0=0;MQRankSum=-0.856;QD=28.50;ReadPosRankSum=-2.936;VQSLOD=2.6380;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:61.09:0,61,615	0/0:9,0:9:23.38:0,23,142	0/0:15,0:15:38.87:0,39,445	0/0:15,0:15:27.04:0,27,315	0/0:32,0:32:78.76:0,79,466	0/0:23,0:23:64.04:0,64,377	0/0:11,0:11:29.03:0,29,163	1/1:2,29:31:84.15:973,84,0	0/0:10,0:10:29.03:0,29,163	0/0:15,0:15:43.77:0,44,267	0/0:19,0:19:49.60:0,50,296	0/0:19,0:19:55.43:0,55,338	0/0:13,0:13:38.01:0,38,236	0/0:17,0:17:43.64:0,44,256	0/0:18,0:18:52.25:0,52,295	0/0:10,0:10:23.31:0,23,139	1/1:1,25:25:57.19:773,57,0	0/0:6,0:6:11.76:0,12,74	0/0:17,0:17:46.34:0,46,265	0/0:28,0:28:78.72:0,79,470	0/0:9,0:9:23.22:0,23,131	0/0:21,0:21:58.15:0,58,334	0/0:28,0:28:78.89:0,79,482	0/0:10,0:10:29.30:0,29,186	0/0:23,0:23:55.34:0,55,328	0/0:15,0:15:43.85:0,44,275	0/0:25,0:25:69.74:0,70,398	0/0:17,0:17:49.34:0,49,277
chr10	25938219	.	TC	T	15291.88	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=8.075;DP=496;FS=0.000;HRun=2;HaplotypeScore=128.6789;InbreedingCoeff=0.9862;MQ=75.93;MQ0=0;MQRankSum=-8.668;QD=35.32;ReadPosRankSum=3.177;VQSLOD=4.3402;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:90.27:0,90,1305	1/1:0,9:9:21.07:273,21,0	0/0:16,0:16:48.14:0,48,691	0/0:16,0:16:42.11:0,42,593	1/1:0,23:23:66.21:856,66,0	1/1:0,15:15:45.15:584,45,0	1/1:2,12:13:33.09:413,33,0	1/1:1,18:19:54.18:701,54,0	1/1:0,15:15:45.15:584,45,0	1/1:2,20:22:60.18:766,60,0	1/1:0,18:18:42.14:545,42,0	1/1:0,16:16:45.15:584,45,0	1/1:0,19:19:57.19:739,57,0	1/1:1,17:18:51.17:662,51,0	1/1:0,11:11:30.10:389,30,0	1/1:0,17:17:45.15:584,45,0	1/1:0,17:17:48.16:623,48,0	1/1:0,5:5:12.04:156,12,0	1/1:1,11:12:36.10:451,36,0	1/1:1,23:24:66.21:856,66,0	1/1:1,13:14:24.08:311,24,0	1/1:0,25:25:63.20:817,63,0	1/1:0,23:23:63.20:817,63,0	1/1:0,12:12:27.09:350,27,0	1/1:0,18:18:51.17:662,51,0	1/1:0,21:21:60.20:779,60,0	1/1:0,29:29:87.28:1129,87,0	1/1:0,17:17:51.17:662,51,0
chr10	25938262	.	CGTA	C	17541.43	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=8.557;DP=437;FS=1.348;HRun=0;HaplotypeScore=161.4227;InbreedingCoeff=0.9892;MQ=64.48;MQ0=0;MQRankSum=-9.902;QD=44.75;ReadPosRankSum=1.222;VQSLOD=6.3819;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:66.21:0,66,1450	1/1:0,8:8:24.08:398,24,0	0/0:13,0:13:36.04:0,36,677	0/0:8,0:8:17.89:0,18,336	1/1:0,12:12:35.95:527,36,0	1/1:1,12:13:39.13:643,39,0	1/1:1,15:15:45.15:735,45,0	1/1:0,28:28:84.08:1271,84,0	1/1:2,16:18:54.13:837,54,0	1/1:1,11:12:36.12:567,36,0	1/1:3,15:17:48.14:746,48,0	1/1:1,12:13:39.12:621,39,0	1/1:4,16:20:60.14:961,60,0	1/1:3,14:17:48.15:770,48,0	1/1:0,12:12:36.12:597,36,0	1/1:1,13:14:42.13:674,42,0	1/1:3,17:20:54.14:842,54,0	1/1:2,4:6:15.05:234,15,0	1/1:1,20:21:60.17:914,60,0	1/1:3,18:21:60.05:929,60,0	1/1:1,11:12:24.08:398,24,0	1/1:1,10:11:33.03:515,33,0	1/1:5,11:16:42.10:622,42,0	1/1:5,8:13:30.05:419,30,0	1/1:1,14:15:45.14:720,45,0	1/1:2,18:20:60.15:962,60,0	1/1:2,24:25:75.23:1216,75,0	1/1:3,7:10:30.05:420,30,0
chr10	25938294	.	C	CT	9275.97	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=6.346;DP=483;FS=4.617;HRun=8;HaplotypeScore=174.6834;InbreedingCoeff=0.9088;MQ=49.52;MQ0=1;MQRankSum=-5.336;QD=21.42;ReadPosRankSum=-0.433;VQSLOD=2.8480;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:56.95:0,57,522	1/1:4,9:13:33.02:352,33,0	0/0:12,0:9:17.75:0,18,148	0/0:15,0:6:2.13:0,2,44	1/1:6,8:14:35.78:330,36,0	1/1:6,8:14:20.44:254,20,0	1/1:8,13:21:45.67:507,46,0	1/1:34,2:36:74.64:595,75,0	1/1:6,14:20:50.97:536,51,0	1/1:8,5:14:26.88:251,27,0	1/1:6,13:18:41.79:415,42,0	1/1:6,9:15:41.82:410,42,0	1/1:7,10:17:32.97:338,33,0	1/1:3,9:12:32.89:327,33,0	1/1:9,8:18:35.92:356,36,0	1/1:6,10:16:38.94:382,39,0	1/1:22,5:27:65.29:555,65,0	1/1:6,3:9:16.79:171,17,0	1/1:10,9:19:47.92:445,48,0	1/1:12,15:27:58.98:579,59,0	1/1:7,6:13:23.90:230,24,0	1/1:3,6:10:26.80:258,27,0	1/1:12,6:17:32.89:310,33,0	1/1:6,6:12:21.01:216,21,0	1/1:10,5:16:38.13:301,38,0	1/1:11,9:20:23.56:437,24,0	1/1:12,12:23:59.64:534,60,0	1/1:4,5:9:18.01:187,18,0
chr10	25938302	.	T	TTC	5657.20	PASS	AB=0.991;AC=44;AF=0.786;AN=56;BaseQRankSum=7.704;DP=451;FS=1.001;HRun=0;HaplotypeScore=164.5797;InbreedingCoeff=0.2900;MQ=45.81;MQ0=2;MQRankSum=-5.166;QD=14.18;ReadPosRankSum=6.059;VQSLOD=4.8177;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:72.01:0,72,939	1/1:11,1:12:16.14:175,16,0	0/0:12,0:7:21.05:0,21,244	0/0:15,0:5:4.04:0,4,80	1/1:17,0:17:20.14:163,20,0	0/1:13,0:13:14.23:102,0,14	0/1:23,0:21:6.11:154,0,6	1/1:14,15:29:71.89:1057,72,0	1/1:19,0:19:29.42:192,29,0	1/1:11,0:11:10.97:144,11,0	1/1:19,0:18:6.47:146,6,0	1/1:15,1:16:7.62:174,8,0	1/1:14,0:14:16.24:145,16,0	1/1:11,0:11:28.85:153,29,0	0/1:16,0:16:9.86:153,0,10	1/1:14,0:14:35.82:206,36,0	1/1:15,12:27:68.27:783,68,0	0/1:10,0:10:5.54:80,0,6	1/1:20,0:20:14.91:250,15,0	1/1:22,0:22:26.25:248,26,0	1/1:10,0:10:22.45:112,22,0	1/1:10,0:10:9.80:141,10,0	1/1:12,2:14:3.46:242,3,0	1/1:9,1:10:5.10:110,5,0	0/1:15,0:16:9.66:165,0,10	0/1:16,1:17:10.64:204,0,11	1/1:20,0:19:13.86:205,14,0	1/1:7,1:8:17.75:153,18,0
chr10	25938695	.	TA	T	10894.25	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=9.532;DP=430;FS=0.477;HRun=4;HaplotypeScore=76.4615;InbreedingCoeff=0.9427;MQ=60.76;MQ0=2;MQRankSum=-1.275;QD=30.95;ReadPosRankSum=1.645;VQSLOD=5.2638;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:54.18:0,54,756	1/1:0,6:6:18.06:216,18,0	0/0:2,0:2:3.01:0,3,42	0/0:5,0:5:9.01:0,9,126	1/1:3,15:16:39.12:468,39,0	1/1:1,21:22:51.16:611,51,0	1/1:0,10:10:30.09:359,30,0	0/0:25,0:25:72.19:0,72,901	1/1:0,18:18:45.14:540,45,0	1/1:1,22:22:63.19:756,63,0	1/1:2,15:16:39.12:467,39,0	1/1:1,5:6:15.05:180,15,0	1/1:0,16:15:39.12:468,39,0	1/1:0,16:16:48.15:574,48,0	0/0:10,0:10:29.96:0,30,268	1/1:1,21:21:57.17:684,57,0	0/0:17,0:17:51.17:0,51,684	1/1:0,6:6:18.06:216,18,0	1/1:3,16:18:45.14:538,45,0	1/1:1,14:15:39.12:468,39,0	1/1:1,14:15:36.11:431,36,0	1/1:1,10:11:27.08:324,27,0	1/1:0,19:19:57.17:683,57,0	1/1:1,6:7:18.06:216,18,0	1/1:1,11:12:27.08:324,27,0	1/1:2,26:28:72.22:862,72,0	1/1:0,33:33:93.29:1115,93,0	1/1:0,13:13:33.10:396,33,0
chr10	25938810	.	TAAG	T	12218.42	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=6.975;DP=332;FS=17.181;HRun=0;HaplotypeScore=98.8017;InbreedingCoeff=0.7380;MQ=55.14;MQ0=0;MQRankSum=-6.827;QD=40.06;ReadPosRankSum=1.089;VQSLOD=4.8863;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:45.15:0,45,1030	1/1:1,9:10:27.09:459,27,0	0/0:8,0:8:21.04:0,21,348	0/0:2,0:2:2.84:0,3,14	1/1:0,29:29:48.16:816,48,0	1/1:2,9:10:27.09:452,27,0	1/1:2,4:6:15.05:251,15,0	1/1:3,20:23:63.05:1035,63,0	1/1:1,12:13:33.11:559,33,0	1/1:3,10:13:39.08:591,39,0	1/1:2,18:20:48.08:753,48,0	1/1:1,1:2:6.01:76,6,0	1/1:2,11:13:39.09:604,39,0	1/1:1,11:12:33.10:535,33,0	1/1:0,6:6:18.06:306,18,0	1/1:2,7:9:21.07:357,21,0	1/1:2,7:9:21.03:323,21,0	1/1:1,3:4:6.02:102,6,0	1/1:0,17:17:48.16:816,48,0	1/1:2,15:17:39.12:639,39,0	1/1:2,3:5:6.02:102,6,0	1/1:0,7:7:15.05:254,15,0	1/1:2,12:14:30.09:484,30,0	1/1:1,2:3:6.02:102,6,0	1/1:2,9:11:33.10:514,33,0	1/1:3,13:16:45.11:712,45,0	1/1:4,26:30:87.14:1326,87,0	1/1:3,2:5:3.01:51,3,0
chr10	25938827	.	C	CT	11061.42	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=5.693;DP=355;FS=10.623;HRun=5;HaplotypeScore=94.2926;InbreedingCoeff=0.8378;MQ=57.74;MQ0=0;MQRankSum=-5.881;QD=33.72;ReadPosRankSum=-0.347;VQSLOD=3.9082;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:51.10:0,51,538	1/1:0,11:11:30.10:394,30,0	0/0:6,0:6:18.04:0,18,192	0/0:4,0:4:5.91:0,6,48	1/1:1,26:27:69.22:907,69,0	1/1:0,18:17:45.15:592,45,0	1/1:0,6:6:18.06:237,18,0	1/1:5,25:30:75.23:969,75,0	1/1:2,14:16:42.14:548,42,0	1/1:1,14:15:42.14:550,42,0	1/1:3,13:16:42.09:520,42,0	1/1:0,1:1:3.01:39,3,0	1/1:3,9:12:24.08:312,24,0	1/1:0,12:12:33.11:434,33,0	1/1:0,5:5:15.05:197,15,0	1/1:0,12:12:36.12:473,36,0	1/1:2,9:11:21.07:276,21,0	1/1:1,5:6:15.05:197,15,0	1/1:3,23:26:75.23:970,75,0	1/1:2,18:20:51.17:670,51,0	1/1:0,4:4:12.04:158,12,0	1/1:0,8:8:24.08:315,24,0	1/1:4,9:13:27.05:335,27,0	1/1:0,3:3:9.03:118,9,0	1/1:1,12:13:30.10:394,30,0	1/1:1,11:12:33.11:434,33,0	1/1:2,26:28:69.22:903,69,0	1/1:0,3:3:9.03:118,9,0
chr10	25939000	.	TG	T	4443.34	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=8.107;DP=304;FS=7.447;HRun=1;HaplotypeScore=107.2016;InbreedingCoeff=0.8269;MQ=72.34;MQ0=0;MQRankSum=-9.919;QD=17.22;ReadPosRankSum=3.796;VQSLOD=5.0307;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:57.17:0,57,886	1/1:0,6:6:17.59:108,18,0	0/0:16,0:16:48.15:0,48,739	0/0:10,0:10:27.09:0,27,407	1/1:4,16:20:52.57:327,53,0	1/1:1,14:15:44.10:280,44,0	1/1:2,5:7:14.49:89,14,0	1/1:3,18:21:55.73:385,56,0	1/1:3,9:12:30.53:187,31,0	1/1:3,11:14:36.77:216,37,0	1/1:1,14:15:44.25:291,44,0	1/1:0,3:3:8.77:52,9,0	1/1:1,12:13:36.96:215,37,0	1/1:0,7:7:20.50:124,21,0	1/1:1,5:6:14.49:90,14,0	1/1:1,5:6:17.70:117,18,0	1/1:0,5:5:14.57:90,15,0	1/1:0,2:2:5.95:43,6,0	1/1:0,11:11:29.60:199,30,0	1/1:1,17:18:52.91:334,53,0	1/1:1,2:3:5.91:39,6,0	1/1:0,9:9:26.23:151,26,0	1/1:1,13:14:40.97:253,41,0	1/1:2,1:3:2.92:17,3,0	1/1:4,12:16:45.65:280,46,0	1/1:3,14:17:49.71:329,50,0	1/1:3,8:11:24.85:148,25,0	1/1:0,4:4:11.86:80,12,0
chr10	25939002	.	ACTG	A	7421.29	PASS	AB=0.591;AC=49;AF=0.875;AN=56;BaseQRankSum=9.105;DP=317;FS=13.378;HRun=0;HaplotypeScore=109.1257;InbreedingCoeff=0.6730;MQ=71.28;MQ0=0;MQRankSum=-9.482;QD=27.38;ReadPosRankSum=5.545;VQSLOD=4.0229;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:57.20:0,57,1393	1/1:0,6:6:18.04:191,18,0	0/0:15,0:15:45.15:0,45,1039	0/0:11,0:11:30.10:0,30,594	1/1:3,15:19:51.10:532,51,0	1/1:2,14:16:33.03:473,33,0	1/1:4,5:9:3.38:151,3,0	0/1:8,18:26:50.32:535,0,50	1/1:3,9:12:35.04:334,35,0	1/1:4,11:15:38.74:381,39,0	1/1:3,14:17:30.62:449,31,0	1/1:0,3:3:9.02:94,9,0	1/1:1,12:13:38.68:387,39,0	1/1:0,7:7:21.05:221,21,0	1/1:2,5:7:17.41:168,17,0	1/1:1,5:6:17.41:169,17,0	1/1:0,5:5:15.03:159,15,0	1/1:0,2:2:6.02:70,6,0	1/1:0,11:11:30.08:338,30,0	1/1:0,17:17:51.13:545,51,0	1/1:1,2:3:6.02:66,6,0	1/1:1,9:10:30.02:296,30,0	1/1:2,13:15:42.09:441,42,0	1/1:2,1:3:3.01:30,3,0	1/1:4,12:16:44.45:446,44,0	1/1:4,14:18:38.96:545,39,0	1/1:3,8:11:26.93:265,27,0	1/1:0,4:4:12.03:136,12,0
chr10	25939045	.	G	GA	395.26	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-5.021;DP=391;FS=19.531;HRun=6;HaplotypeScore=82.0963;InbreedingCoeff=0.7485;MQ=64.63;MQ0=0;MQRankSum=3.846;QD=24.70;ReadPosRankSum=2.076;VQSLOD=2.1489;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,15:16:39.12:490,39,0	0/0:8,0:8:24.05:0,24,245	0/0:8,0:8:21.04:0,21,209	0/0:6,0:7:3.08:0,3,103	0/0:21,0:21:54.12:0,54,550	0/0:18,0:18:45.09:0,45,459	0/0:9,0:9:21.04:0,21,214	0/0:29,0:29:60.12:0,60,607	0/0:12,0:12:33.08:0,33,337	0/0:19,0:19:57.13:0,57,582	0/0:25,0:24:62.88:0,63,642	0/0:11,0:11:33.07:0,33,336	0/0:15,0:15:42.10:0,42,428	0/0:6,0:6:18.04:0,18,183	0/0:11,0:11:33.08:0,33,337	0/0:8,0:8:21.05:0,21,214	0/0:12,0:12:33.07:0,33,337	0/0:9,0:9:18.04:0,18,184	0/0:17,0:17:42.09:0,42,428	0/0:18,0:18:48.11:0,48,489	0/0:3,0:3:9.02:0,9,91	0/0:7,0:7:21.05:0,21,214	0/0:10,0:10:21.04:0,21,214	0/0:11,0:11:26.86:0,27,275	0/0:25,0:25:72.15:0,72,729	0/0:31,0:31:87.20:0,87,888	0/0:22,0:22:60.13:0,60,612	0/0:3,0:3:9.02:0,9,92
chr10	25940545	.	G	GAATGCAGCGGTGTGTAAAAAA	35157.08	PASS	AB=0.588;AC=49;AF=0.875;AN=56;BaseQRankSum=-4.489;DP=570;FS=2.843;HRun=0;HaplotypeScore=168.0398;InbreedingCoeff=0.5865;MQ=79.16;MQ0=0;MQRankSum=-7.147;QD=68.94;ReadPosRankSum=1.998;VQSLOD=4.5537;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:54.08:0,54,2190	1/1:2,3:15:15:964,15,0	0/0:21,0:21:44.95:0,45,1351	0/0:18,0:18:32.23:0,32,843	1/1:4,1:26:20.88:471,21,0	1/1:2,5:25:15.05:1488,15,0	1/1:18,0:18:51.13:2865,51,0	1/1:46,0:46:99:5237,126,0	1/1:2,3:27:9.03:893,9,0	1/1:2,8:26:57.11:4022,57,0	1/1:2,4:28:29.83:1308,30,0	1/1:0,2:17:6.02:594,6,0	1/1:13,0:13:38.87:1377,39,0	1/1:2,3:13:9.03:893,9,0	1/1:2,4:14:12.04:1190,12,0	1/1:3,1:11:3.01:298,3,0	1/1:1,1:8:3.01:298,3,0	0/1:3,1:10:14.82:291,0,15	1/1:3,2:18:45.15:2645,45,0	1/1:5,5:34:26.74:1561,27,0	1/1:6,0:6:12.04:954,12,0	1/1:4,4:22:20.94:1250,21,0	1/1:5,2:21:5.70:594,6,0	1/1:0,1:16:3.01:297,3,0	1/1:0,2:32:6.02:595,6,0	1/1:3,5:20:48.11:2994,48,0	1/1:2,3:35:12.04:1187,12,0	1/1:1,3:8:9.03:893,9,0
chr10	25943202	.	T	TGCAAGCCTGGCAGAA	79717.23	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-8.344;DP=557;FS=6.052;HRun=0;HaplotypeScore=195.5878;InbreedingCoeff=0.9857;MQ=76.68;MQ0=0;MQRankSum=-14.558;QD=172.55;ReadPosRankSum=2.475;VQSLOD=5.1387;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:99:0,99,4333	1/1:3,2:5:15.05:789,15,0	0/0:29,0:29:84.29:0,84,3330	0/0:13,0:13:24.12:0,24,1358	1/1:12,9:24:57.02:3082,57,0	1/1:6,11:18:48.16:3472,48,0	1/1:6,4:11:27.09:1869,27,0	1/1:21,2:24:66.21:3814,66,0	1/1:9,17:28:78.27:5694,78,0	1/1:14,21:37:99:7409,108,0	1/1:6,6:13:39.09:2214,39,0	1/1:5,14:21:57.20:3980,57,0	1/1:12,7:21:57.20:3616,57,0	1/1:8,13:24:66.23:4809,66,0	0/0:20,0:20:60.19:0,60,2500	1/1:9,10:20:54.19:3846,54,0	1/1:4,9:17:33.54:2164,34,0	1/1:5,5:11:30.10:2235,30,0	1/1:7,5:15:33.11:1995,33,0	1/1:5,10:15:42.14:2930,42,0	1/1:2,8:12:27.05:1852,27,0	1/1:10,20:31:81.20:5675,81,0	1/1:10,16:25:75.17:4988,75,0	1/1:8,8:21:35.99:1737,36,0	1/1:7,10:22:48.16:3310,48,0	1/1:3,14:20:60.21:3754,60,0	1/1:7,11:20:51.13:3566,51,0	1/1:0,4:5:12.04:917,12,0
chr10	25943875	.	GA	G	9322.12	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=11.722;DP=562;FS=5.470;HRun=8;HaplotypeScore=162.9402;InbreedingCoeff=0.9939;MQ=69.85;MQ0=0;MQRankSum=-5.776;QD=19.50;ReadPosRankSum=0.177;VQSLOD=3.1444;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:64.53:0,65,1031	1/1:3,7:10:26.11:192,26,0	0/0:18,0:19:39.53:0,40,424	0/0:12,0:11:18.05:0,18,206	1/1:18,13:31:66.74:473,67,0	1/1:19,4:23:59.17:497,59,0	1/1:5,15:20:49.92:343,50,0	1/1:5,17:22:53.66:420,54,0	1/1:10,8:18:53.40:428,53,0	1/1:13,11:24:62:508,62,0	1/1:16,7:23:65.24:550,65,0	1/1:9,7:16:35.50:272,35,0	1/1:8,5:13:35.50:280,35,0	1/1:9,8:17:41:304,41,0	0/0:21,0:21:60.17:0,60,714	1/1:13,3:16:35.92:321,36,0	1/1:19,5:24:47.61:409,48,0	1/1:10,2:12:26.96:241,27,0	1/1:8,7:15:38.95:344,39,0	1/1:14,10:24:60.46:474,60,0	1/1:11,4:15:24.02:224,24,0	1/1:18,9:27:68.15:548,68,0	1/1:12,6:18:46.80:356,47,0	1/1:10,2:12:18:171,18,0	1/1:11,9:20:50.24:388,50,0	1/1:16,10:26:73.50:586,74,0	1/1:21,20:41:99:770,103,0	1/1:4,7:11:29.77:223,30,0
chr10	25943886	.	G	GA	13602.57	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=11.980;DP=562;FS=6.009;HRun=1;HaplotypeScore=163.7281;InbreedingCoeff=0.9827;MQ=65.73;MQ0=0;MQRankSum=-7.258;QD=28.05;ReadPosRankSum=1.754;VQSLOD=4.4672;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:90.28:0,90,1152	1/1:5,6:11:28.78:292,29,0	0/0:19,0:19:50.49:0,50,570	0/0:7,0:7:21.06:0,21,263	1/1:18,15:33:84.52:889,85,0	1/1:18,7:25:58:678,58,0	1/1:3,14:17:39.03:365,39,0	1/1:4,23:27:70.06:788,70,0	1/1:13,9:22:58.99:680,59,0	1/1:11,15:26:75.15:887,75,0	1/1:17,8:25:62.89:731,63,0	1/1:8,6:14:35.56:361,36,0	1/1:9,5:14:39.08:442,39,0	1/1:7,8:15:44.56:454,45,0	0/0:20,0:20:60.19:0,60,774	1/1:11,3:14:36.09:431,36,0	1/1:20,4:24:42.10:504,42,0	1/1:9,2:11:27.07:321,27,0	1/1:7,9:17:42.12:516,42,0	1/1:14,11:25:71.55:771,72,0	1/1:11,4:15:12.92:154,13,0	1/1:16,8:24:63.13:721,63,0	1/1:12,5:17:49.30:523,49,0	1/1:8,2:10:12.03:156,12,0	1/1:12,9:21:42.67:615,43,0	1/1:14,12:26:69.95:814,70,0	1/1:20,20:40:99:1139,108,0	1/1:5,7:12:33.08:370,33,0
chr10	25944545	.	G	GA	3505.86	PASS	AB=0.788;AC=33;AF=0.589;AN=56;BaseQRankSum=-6.278;DP=485;FS=0.000;HRun=15;HaplotypeScore=80.7234;InbreedingCoeff=0.1593;MQ=78.12;MQ0=3;MQRankSum=0.047;QD=9.66;ReadPosRankSum=-2.069;VQSLOD=2.4114;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:14:13.93:0,14,48	1/1:5,2:8:10.65:70,11,0	0/0:24,0:16:8.55:0,9,36	0/0:22,0:16:9.97:0,10,55	1/1:13,9:21:17.92:254,18,0	0/1:14,6:24:5.14:184,0,5	0/1:6,4:10:4.93:128,0,5	0/0:8,0:22:24.12:0,24,70	1/1:10,3:17:1.14:175,1,0	1/1:12,3:16:10.81:171,11,0	0/1:14,6:19:0.10:195,0,0	1/1:16,4:20:14.52:206,15,0	0/1:9,3:12:12.78:104,0,13	0/1:14,4:18:21.44:144,0,21	0/0:7,0:17:10.72:0,11,56	0/1:7,4:12:15.26:87,0,15	0/0:2,0:19:27.63:0,28,87	0/1:23,8:33:12.22:278,0,12	0/1:15,2:16:29.38:97,0,29	0/1:9,5:14:24.10:59,0,24	1/1:11,2:13:4.48:111,4,0	0/1:13,1:14:30.04:95,0,30	1/1:6,5:11:17.97:149,18,0	1/1:4,10:14:32.95:274,33,0	0/1:13,6:18:12.15:118,0,12	1/1:14,7:21:14.94:231,15,0	1/1:14,8:23:14.86:327,15,0	1/1:1,3:4:5.99:50,6,0
chr10	25944612	.	AC	A	11692.23	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=0.347;DP=517;FS=14.998;HRun=8;HaplotypeScore=90.8588;InbreedingCoeff=0.9685;MQ=79.53;MQ0=0;MQRankSum=-7.416;QD=24.31;ReadPosRankSum=5.154;VQSLOD=3.8440;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,16:18:36.06:347,36,0	1/1:1,12:13:30.04:284,30,0	0/0:20,0:18:42:0,42,438	0/0:16,0:16:27.07:0,27,305	1/1:1,27:28:75.06:712,75,0	1/1:1,27:28:72.11:695,72,0	1/1:1,12:13:33.05:319,33,0	1/1:5,23:28:68.93:636,69,0	1/1:3,21:24:54.08:517,54,0	1/1:3,19:22:63.10:608,63,0	1/1:1,17:18:48.07:463,48,0	1/1:0,22:22:63.10:608,63,0	1/1:1,13:14:36.06:347,36,0	1/1:1,16:17:36.01:337,36,0	1/1:3,13:16:42.06:401,42,0	1/1:0,17:17:51.03:482,51,0	1/1:3,25:28:60.09:579,60,0	1/1:2,13:15:36.01:339,36,0	1/1:3,14:17:39.06:376,39,0	1/1:1,17:18:51.02:480,51,0	1/1:2,9:11:30.04:286,30,0	1/1:1,11:12:27.04:260,27,0	1/1:2,14:16:42.04:401,42,0	1/1:3,16:19:45.04:427,45,0	1/1:2,10:12:30.04:289,30,0	1/1:0,17:17:51.08:492,51,0	1/1:1,32:33:96.13:919,96,0	1/1:0,5:5:9.01:87,9,0
chr10	25946783	.	A	ACTTT	158.15	PASS	AB=1.000;AC=12;AF=0.400;AN=30;BaseQRankSum=0.664;DP=331;FS=16.151;HRun=0;HaplotypeScore=29.7757;InbreedingCoeff=0.4596;MQ=22.36;MQ0=165;MQRankSum=-2.281;QD=1.80;ReadPosRankSum=0.029;VQSLOD=-0.4741;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:4:3.01:0,3,45	0/0:5,0:4:3.01:0,3,45	./.	./.	0/0:17,0:14:3.01:0,3,45	1/1:10,1:5:3.01:69,3,0	./.	./.	./.	0/0:15,0:11:18.06:0,18,261	0/0:23,0:21:12.04:0,12,182	./.	./.	./.	1/1:10,0:2:3.01:52,3,0	0/1:9,0:3:0:0,0,0	./.	./.	0/0:16,0:1:3.01:0,3,45	0/0:22,0:21:21.07:0,21,318	./.	1/1:10,0:10:3.01:52,3,0	1/1:8,13:19:3.01:70,3,0	1/1:12,0:1:2.96:19,3,0	0/1:9,0:7:0:0,0,0	0/0:18,0:9:9:0,9,112	./.	./.
chr10	25946959	.	TC	T	1191.95	PASS	AC=42;AF=0.840;AN=50;BaseQRankSum=-4.999;DP=179;FS=2.314;HRun=9;HaplotypeScore=27.3221;InbreedingCoeff=0.4696;MQ=66.71;MQ0=6;MQRankSum=-1.281;QD=9.77;ReadPosRankSum=1.866;VQSLOD=0.7435;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:16:30.37:0,30,137	1/1:2,1:3:2.98:21,3,0	0/0:14,0:10:17.34:0,17,141	0/0:12,0:3:2.99:0,3,23	1/1:5,5:8:6:55,6,0	1/1:2,4:4:6:55,6,0	1/1:1,1:2:3:27,3,0	./.	1/1:2,6:8:2.96:27,3,0	./.	1/1:1,7:8:18.01:164,18,0	1/1:2,5:6:5.99:51,6,0	1/1:0,5:4:9:82,9,0	1/1:2,3:4:6:55,6,0	0/0:1,0:5:5.32:0,5,28	1/1:0,3:3:6:55,6,0	1/1:4,2:6:8.99:81,9,0	1/1:2,2:3:3:27,3,0	./.	1/1:2,4:4:6:55,6,0	1/1:1,5:4:9:82,9,0	1/1:3,9:12:14.50:118,14,0	1/1:3,6:9:6:54,6,0	1/1:4,3:7:5.98:54,6,0	1/1:1,2:3:3:27,3,0	1/1:0,5:5:15.01:137,15,0	1/1:3,3:6:8.95:74,9,0	1/1:0,1:1:3:27,3,0
chr10	25946963	.	C	CCT	469.74	PASS	AB=1.000;AC=3;AF=0.056;AN=54;BaseQRankSum=-4.525;DP=181;FS=0.000;HRun=0;HaplotypeScore=33.4436;InbreedingCoeff=0.1797;MQ=65.36;MQ0=11;MQRankSum=0.940;QD=13.42;ReadPosRankSum=0.827;VQSLOD=3.0320;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,17:16:33.11:561,33,0	0/0:2,0:2:2.97:0,3,20	0/1:16,0:10:0.76:1,0,216	0/0:12,0:3:2.75:0,3,17	0/0:7,0:5:5.98:0,6,46	0/0:6,0:4:5.98:0,6,46	0/0:1,0:1:2.99:0,3,23	0/0:2,0:2:2.99:0,3,23	0/0:7,0:7:5.74:0,6,43	./.	0/0:7,0:7:17.93:0,18,137	0/0:7,0:6:8.96:0,9,69	0/0:5,0:4:8.97:0,9,68	0/0:7,0:5:8.94:0,9,66	0/0:7,0:5:4.74:0,5,17	0/0:4,0:3:5.98:0,6,46	0/0:7,0:7:11.94:0,12,90	0/0:6,0:3:2.99:0,3,23	0/0:2,0:1:3:0,3,25	0/0:6,0:4:8.98:0,9,71	0/0:9,0:5:8.97:0,9,69	0/0:11,0:11:17.87:0,18,144	0/0:9,0:9:8.94:0,9,67	0/0:7,0:7:14.95:0,15,118	0/0:3,0:3:2.99:0,3,23	0/0:6,0:6:17.93:0,18,137	0/0:5,0:5:11.88:0,12,88	0/0:1,0:1:2.99:0,3,23
chr10	25946968	.	CA	C	380.77	PASS	AB=1.000;AC=37;AF=0.771;AN=48;BaseQRankSum=-1.984;DP=180;FS=0.000;HRun=1;HaplotypeScore=31.0029;InbreedingCoeff=0.2075;MQ=61.06;MQ0=20;MQRankSum=1.469;QD=3.17;ReadPosRankSum=1.224;VQSLOD=-0.4448;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:16:33.05:0,33,323	1/1:1,1:2:2.96:19,3,0	0/0:15,0:8:5.98:0,6,130	./.	1/1:6,0:4:4.25:29,4,0	1/1:4,0:2:5.42:22,5,0	1/1:1,0:1:0.89:2,1,0	./.	1/1:7,0:7:2.47:9,2,0	./.	1/1:7,0:7:13.95:56,14,0	1/1:5,1:5:5.95:57,6,0	1/1:5,0:4:7.31:26,7,0	0/1:6,0:4:8.87:9,0,25	0/0:6,0:4:5.59:0,6,43	1/1:4,0:3:5.17:19,5,0	0/1:8,0:8:5.66:41,0,6	1/1:11,1:3:3.01:32,3,0	./.	1/1:5,0:3:4.97:18,5,0	0/1:8,0:5:7.22:14,0,7	1/1:10,1:11:12.61:67,13,0	0/1:7,0:7:5.62:6,0,10	1/1:4,1:5:5.34:22,5,0	1/1:4,0:4:2.68:11,3,0	0/1:6,0:6:9.53:10,0,13	1/1:4,1:5:7.85:42,8,0	1/1:1,0:1:2.04:6,2,0
chr10	25947750	.	G	GCACACACACACACACACACACA	29236.38	PASS	AB=1.000;AC=48;AF=0.889;AN=54;BaseQRankSum=4.099;DP=594;FS=0.000;HRun=0;HaplotypeScore=280.7157;InbreedingCoeff=0.4955;MQ=61.79;MQ0=6;MQRankSum=-8.783;QD=55.79;ReadPosRankSum=-2.124;VQSLOD=3.4062;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:98.83:0,99,4388	./.	0/1:35,0:19:25.91:26,0,252	0/1:37,0:26:2.51:3,0,308	1/1:20,0:20:5.25:327,5,0	1/1:19,0:18:11.99:815,12,0	1/1:21,0:21:18.06:1291,18,0	1/1:32,0:27:54.08:1755,54,0	1/1:10,0:21:9.50:792,10,0	1/1:19,0:19:45.07:2349,45,0	1/1:12,0:11:12.01:423,12,0	1/1:10,0:10:5.40:297,5,0	1/1:12,0:23:27.09:1812,27,0	1/1:17,5:26:27.09:2380,27,0	0/0:25,0:25:66.21:0,66,3100	1/1:10,9:19:24.08:2203,24,0	1/1:13,0:25:27.09:1751,27,0	1/1:4,0:13:6.02:387,6,0	1/1:19,0:18:22.15:2602,22,0	1/1:19,0:18:2.07:119,2,0	1/1:16,0:16:11.96:130,12,0	1/1:14,0:14:12.04:1162,12,0	1/1:19,0:19:8.09:914,8,0	1/1:19,8:29:9.03:860,9,0	1/1:21,0:20:14.34:1260,14,0	1/1:30,0:29:66.13:4203,66,0	1/1:21,0:20:32.59:1134,33,0	1/1:4,0:4:6.02:243,6,0
chr10	25948507	.	GT	G	15182.78	PASS	AB=0.820;AC=51;AF=0.911;AN=56;BaseQRankSum=-1.195;DP=877;FS=10.504;HRun=10;HaplotypeScore=151.5959;InbreedingCoeff=-0.0962;MQ=72.93;MQ0=0;MQRankSum=-2.481;QD=17.31;ReadPosRankSum=7.286;VQSLOD=3.6594;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,33:38:82.92:741,83,0	1/1:4,15:19:44.96:391,45,0	0/1:16,5:20:49.89:50,0,183	0/1:22,1:23:21.07:21,0,162	1/1:9,40:49:99:898,105,0	1/1:8,30:38:26.51:650,27,0	1/1:4,18:22:47.98:417,48,0	0/1:20,9:44:99:186,0,279	1/1:4,42:46:99:1042,120,0	1/1:7,35:43:99:846,100,0	1/1:6,24:30:29.68:468,30,0	1/1:6,21:27:40.20:475,40,0	1/1:3,34:37:95.91:825,96,0	1/1:2,32:34:92.98:807,93,0	0/1:9,14:31:99:270,0,154	1/1:4,27:31:74.97:651,75,0	0/1:6,7:31:99:107,0,220	1/1:0,15:15:41.99:365,42,0	1/1:5,21:26:59.95:516,60,0	1/1:7,34:41:95.83:817,96,0	1/1:7,16:23:41.72:364,42,0	1/1:3,25:28:65.97:573,66,0	1/1:5,25:31:61.86:526,62,0	1/1:3,24:27:68.90:590,69,0	1/1:2,22:24:65.98:573,66,0	1/1:6,36:42:78.87:853,79,0	1/1:5,45:50:99:1058,123,0	1/1:0,6:6:12:104,12,0
chr10	25949064	.	C	CATCCTCA	22626.31	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-5.100;DP=319;FS=3.083;HRun=0;HaplotypeScore=154.0296;InbreedingCoeff=0.8741;MQ=55.30;MQ0=0;MQRankSum=-2.260;QD=76.70;ReadPosRankSum=2.572;VQSLOD=5.0628;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,5:10:24.07:822,24,0	1/1:4,4:8:16.28:511,16,0	0/0:7,0:7:8.98:0,9,311	0/0:6,0:6:11.60:0,12,200	1/1:8,12:20:40.22:1380,40,0	1/1:3,12:15:31.52:1489,32,0	1/1:4,7:11:27.06:903,27,0	1/1:8,4:12:30.10:1005,30,0	1/1:3,11:14:39.12:1439,39,0	1/1:6,5:11:13.68:828,14,0	1/1:4,11:15:34.53:1338,35,0	1/1:3,4:7:20.98:548,21,0	1/1:5,7:11:28.06:891,28,0	1/1:3,5:8:23.33:649,23,0	0/0:11,0:11:20.13:0,20,640	1/1:1,6:7:17.93:723,18,0	1/1:4,4:8:14.98:310,15,0	1/1:0,3:3:6.02:242,6,0	1/1:4,1:5:12.03:348,12,0	1/1:10,10:21:43.40:1410,43,0	1/1:2,3:5:12:343,12,0	1/1:7,7:14:32.83:926,33,0	1/1:5,10:15:33.05:1095,33,0	1/1:2,7:9:18.06:598,18,0	1/1:11,18:29:18.14:2090,18,0	1/1:3,9:12:25.32:1102,25,0	1/1:9,10:18:36.70:1348,37,0	1/1:3,2:5:14.44:290,14,0
chr10	25950797	.	TA	T	13723.05	PASS	AC=54;AF=0.964;AN=56;BaseQRankSum=-3.785;DP=476;FS=4.543;HRun=4;HaplotypeScore=50.8010;InbreedingCoeff=0.7368;MQ=61.41;MQ0=3;MQRankSum=-2.316;QD=29.83;ReadPosRankSum=3.169;VQSLOD=4.9083;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,32:37:99:1210,102,0	1/1:0,6:6:18.06:216,18,0	1/1:13,1:3:1.78:9,2,0	0/0:14,2:6:11.37:0,11,95	1/1:2,22:24:54.15:633,54,0	1/1:2,12:14:33.10:396,33,0	1/1:0,15:14:36.11:432,36,0	1/1:1,8:8:21.06:250,21,0	1/1:0,15:15:45.14:540,45,0	1/1:0,17:17:51.14:599,51,0	1/1:0,21:21:51.16:612,51,0	1/1:1,19:20:54.17:648,54,0	1/1:0,12:12:30.09:360,30,0	1/1:0,11:11:27.08:324,27,0	1/1:0,17:17:45.14:540,45,0	1/1:1,15:16:42.13:504,42,0	1/1:1,18:19:36.11:432,36,0	1/1:0,17:17:48.15:576,48,0	1/1:1,18:19:54.13:632,54,0	1/1:0,27:27:66.20:792,66,0	1/1:0,25:25:57.17:684,57,0	1/1:0,20:20:54.17:648,54,0	1/1:0,19:19:54.17:647,54,0	1/1:0,19:19:57.17:684,57,0	1/1:0,14:14:33.10:396,33,0	1/1:1,11:12:33.09:384,33,0	1/1:1,16:17:42.13:504,42,0	1/1:0,4:4:6.02:72,6,0
chr10	25950900	.	GA	G	10627.73	PASS	AB=0.875;AC=53;AF=0.946;AN=56;BaseQRankSum=-4.400;DP=507;FS=1.220;HRun=10;HaplotypeScore=55.0301;InbreedingCoeff=0.5613;MQ=59.02;MQ0=3;MQRankSum=-0.501;QD=21.26;ReadPosRankSum=3.217;VQSLOD=5.7505;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,40:45:99:996,116,0	1/1:1,7:8:20.98:182,21,0	0/0:7,0:5:12.90:0,13,118	0/1:6,1:6:14.01:14,0,88	1/1:1,25:26:74.99:651,75,0	1/1:2,15:17:38.98:339,39,0	1/1:1,15:15:38.99:339,39,0	1/1:2,17:19:44.94:384,45,0	1/1:4,22:26:49.23:553,49,0	1/1:7,24:30:48.87:599,49,0	1/1:3,19:22:56.98:495,57,0	1/1:2,14:16:35.99:313,36,0	1/1:0,9:9:24:208,24,0	1/1:0,15:15:41.99:365,42,0	1/1:5,17:23:44.02:371,44,0	1/1:3,16:19:44.99:391,45,0	1/1:3,14:17:38.99:339,39,0	1/1:1,7:8:2.47:161,2,0	1/1:2,10:12:29.02:240,29,0	1/1:1,24:26:71.02:605,71,0	1/1:0,17:17:41.99:365,42,0	1/1:3,14:17:41.02:345,41,0	1/1:1,19:21:56.02:475,56,0	1/1:0,13:13:35.98:313,36,0	1/1:1,14:15:38.99:339,39,0	1/1:2,23:25:68.97:599,69,0	1/1:2,17:19:47.98:417,48,0	1/1:0,9:9:26.99:234,27,0
chr10	25951322	.	GATGT	G	5481.93	PASS	AC=46;AF=0.885;AN=52;BaseQRankSum=-0.272;DP=293;FS=2.400;HRun=0;HaplotypeScore=85.4688;InbreedingCoeff=0.3660;MQ=62.97;MQ0=1;MQRankSum=-2.940;QD=20.15;ReadPosRankSum=1.274;VQSLOD=4.6920;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:9,0:9:20.94:165,21,0	1/1:0,8:8:15.05:286,15,0	0/0:7,0:5:2.08:0,2,23	0/0:9,0:4:0.15:0,0,19	1/1:0,21:21:12.51:229,13,0	1/1:0,12:12:15.05:286,15,0	1/1:2,0:2:5.99:49,6,0	1/1:30,0:30:86.35:629,86,0	1/1:0,5:5:3.01:57,3,0	1/1:1,14:15:30.04:443,30,0	1/1:0,11:11:15.05:275,15,0	1/1:0,6:6:3.01:57,3,0	1/1:2,0:2:5.99:50,6,0	1/1:0,5:5:3.01:57,3,0	0/0:2,0:2:2.68:0,3,11	1/1:0,4:4:6.02:114,6,0	1/1:1,13:13:14.98:246,15,0	1/1:0,14:14:6.02:115,6,0	1/1:2,14:16:38.83:368,39,0	1/1:0,22:22:15.05:286,15,0	./.	./.	1/1:0,7:7:2.90:57,3,0	1/1:3,0:3:5.99:48,6,0	1/1:0,17:17:21.07:401,21,0	1/1:0,24:24:62.84:807,63,0	1/1:1,17:18:23.80:418,24,0	1/1:0,7:7:3.01:39,3,0
chr10	25951323	.	ATG	A	3129.90	PASS	AC=48;AF=0.923;AN=52;BaseQRankSum=1.435;DP=291;FS=0.000;HRun=0;HaplotypeScore=87.2752;InbreedingCoeff=0.3362;MQ=62.99;MQ0=1;MQRankSum=-2.432;QD=11.51;ReadPosRankSum=2.020;VQSLOD=3.3047;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,0:9:20.94:165,21,0	1/1:8,0:8:14.98:124,15,0	0/0:7,0:5:1.61:0,2,22	0/0:9,0:4:2.12:0,2,21	1/1:21,0:21:11.98:98,12,0	1/1:12,0:12:14.98:124,15,0	1/1:2,0:2:5.99:49,6,0	1/1:1,29:30:86.35:629,86,0	1/1:5,0:5:3:25,3,0	1/1:15,0:15:27.43:224,27,0	1/1:11,0:11:14.91:115,15,0	1/1:6,0:6:3:25,3,0	1/1:2,0:2:5.99:50,6,0	1/1:5,0:5:3:25,3,0	1/1:2,0:2:0.47:1,0,0	1/1:4,0:4:5.99:49,6,0	1/1:14,0:13:14.93:116,15,0	1/1:14,0:14:5.99:50,6,0	1/1:14,0:14:38.80:302,39,0	1/1:22,0:22:14.98:123,15,0	./.	./.	1/1:7,0:7:3:25,3,0	1/1:3,0:3:5.99:48,6,0	1/1:17,0:17:20.98:173,21,0	1/1:24,0:24:61.91:483,62,0	1/1:17,0:18:23.80:191,24,0	1/1:7,0:7:2.96:19,3,0
chr10	25953071	.	TG	T	534.57	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.337;DP=450;FS=9.567;HRun=1;HaplotypeScore=39.7227;InbreedingCoeff=0.9772;MQ=74.35;MQ0=0;MQRankSum=-0.940;QD=28.14;ReadPosRankSum=2.404;VQSLOD=2.3935;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:45.15:0,45,719	0/0:9,0:9:27.09:0,27,432	0/0:11,0:11:33.11:0,33,508	0/0:6,0:6:18.06:0,18,271	0/0:28,0:28:84.27:0,84,1319	0/0:19,0:19:57.15:0,57,841	0/0:8,0:8:24.06:0,24,359	0/0:27,0:27:81.24:0,81,1229	0/0:10,0:10:30.10:0,30,474	0/0:25,0:25:75.24:0,75,1176	0/0:23,0:23:69.24:0,69,1103	0/0:6,0:6:18.05:0,18,265	0/0:23,0:23:69.22:0,69,1079	0/0:14,0:14:42.14:0,42,671	1/1:0,19:19:45.15:629,45,0	0/0:9,0:9:27.09:0,27,432	0/0:9,0:9:24.08:0,24,380	0/0:12,0:12:36.12:0,36,569	0/0:15,0:15:42.14:0,42,669	0/0:29,0:29:87.30:0,87,1391	0/0:14,0:14:42.14:0,42,672	0/0:14,0:14:39.10:0,39,575	0/0:16,0:16:45.15:0,45,717	0/0:12,0:12:36.12:0,36,570	0/0:17,0:17:51.17:0,51,815	0/0:16,0:16:48.16:0,48,767	0/0:27,0:27:81.28:0,81,1287	0/0:17,0:17:51.17:0,51,815
chr10	25954491	.	A	AT	11737.32	PASS	AB=1.000;AC=51;AF=0.911;AN=56;BaseQRankSum=-2.194;DP=565;FS=10.157;HRun=10;HaplotypeScore=99.2846;InbreedingCoeff=0.6986;MQ=71.97;MQ0=0;MQRankSum=-3.136;QD=22.53;ReadPosRankSum=1.531;VQSLOD=4.6581;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,20:27:54.14:576,54,0	1/1:1,10:11:5.43:263,5,0	0/0:16,0:16:8.69:0,9,171	0/1:12,0:12:1.06:1,0,95	1/1:6,17:23:23.37:428,23,0	1/1:1,24:25:47.54:711,48,0	1/1:3,21:24:57.14:608,57,0	1/1:7,20:27:32.45:532,32,0	1/1:1,19:20:48.12:512,48,0	1/1:4,17:23:56.79:564,57,0	1/1:2,16:18:45.07:468,45,0	1/1:5,23:28:69.13:723,69,0	1/1:4,9:13:2.42:231,2,0	1/1:3,10:13:21.05:224,21,0	0/0:28,0:28:74.91:0,75,616	1/1:2,16:18:45.11:480,45,0	1/1:6,14:20:45.10:473,45,0	1/1:0,14:15:41.94:430,42,0	1/1:5,18:23:30.32:508,30,0	1/1:5,19:25:29.32:501,29,0	1/1:4,8:12:21.05:224,21,0	1/1:4,16:22:7.56:457,8,0	1/1:6,21:27:29.45:505,29,0	1/1:4,17:22:50.96:526,51,0	1/1:3,12:15:5.43:263,5,0	1/1:3,23:26:69.17:735,69,0	1/1:5,22:27:60.14:634,60,0	1/1:0,5:5:15.04:160,15,0
chr10	25954756	.	TAC	T	1721.64	PASS	AB=0.860;AC=42;AF=0.808;AN=52;BaseQRankSum=1.609;DP=463;FS=0.000;HRun=0;HaplotypeScore=67.8983;InbreedingCoeff=0.3086;MQ=56.43;MQ0=12;MQRankSum=0.478;QD=4.81;ReadPosRankSum=0.469;VQSLOD=2.2397;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:27:36:0,36,362	1/1:1,2:4:8.86:78,9,0	./.	./.	1/1:8,6:14:2.97:32,3,0	1/1:11,5:16:9.01:96,9,0	1/1:17,5:21:3.01:32,3,0	0/1:14,0:14:0.04:0,0,0	1/1:7,6:15:17.71:157,18,0	1/1:10,6:14:8.94:67,9,0	1/1:7,2:9:6.02:64,6,0	0/0:7,1:9:9.36:0,9,86	0/1:12,1:13:26.14:26,0,38	0/0:11,0:10:5.99:0,6,67	1/1:7,7:15:11.86:110,12,0	1/1:3,3:6:9.02:96,9,0	1/1:13,8:21:3.90:207,4,0	1/1:9,3:13:8.86:78,9,0	1/1:9,0:9:3.01:32,3,0	1/1:17,5:22:8.98:84,9,0	0/1:24,10:33:26.14:26,0,35	1/1:17,0:17:11.73:95,12,0	1/1:13,1:18:14.18:120,14,0	1/1:26,6:31:26.69:270,27,0	1/1:10,2:12:2.76:32,3,0	0/1:9,5:14:18.22:18,0,38	1/1:11,4:16:8.84:78,9,0	1/1:4,2:6:6.02:64,6,0
chr10	25957286	.	AG	A	528.13	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.075;DP=612;FS=6.836;HRun=1;HaplotypeScore=61.5325;InbreedingCoeff=0.9997;MQ=61.70;MQ0=2;MQRankSum=0.506;QD=27.80;ReadPosRankSum=2.358;VQSLOD=3.1714;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:72.25:0,72,1139	0/0:19,0:19:57.12:0,57,835	0/0:20,0:16:44.57:0,45,512	0/0:17,0:16:44.40:0,44,476	0/0:28,0:28:81.28:0,81,1290	0/0:17,0:17:48.15:0,48,744	0/0:16,0:16:48.11:0,48,687	0/0:24,0:24:72.19:0,72,1057	0/0:21,0:21:63.20:0,63,977	0/0:32,0:32:96.32:0,96,1516	0/0:21,0:21:63.20:0,63,985	0/0:11,0:11:33.11:0,33,522	0/0:20,0:20:60.20:0,60,954	0/0:16,0:16:48.16:0,48,761	1/1:1,18:19:48.16:623,48,0	0/0:19,0:19:57.19:0,57,907	0/0:33,0:33:99:0,99,1576	0/0:23,0:23:66.22:0,66,1051	0/0:21,0:21:63.21:0,63,997	0/0:24,0:24:72.25:0,72,1151	0/0:26,0:26:75.08:0,75,1112	0/0:18,0:18:54.18:0,54,861	0/0:21,0:21:63.21:0,63,1005	0/0:23,0:23:69.22:0,69,1079	0/0:19,0:19:57.17:0,57,886	0/0:29,0:29:87.29:0,87,1374	0/0:29,0:29:87.27:0,87,1353	0/0:20,0:20:60.20:0,60,952
chr10	25961422	.	TA	T	327	PASS	AC=2;AF=0.045;AN=44;BaseQRankSum=1.526;DP=767;FS=0.000;HRun=2;HaplotypeScore=29.5832;InbreedingCoeff=0.4616;MQ=13.89;MQ0=564;MQRankSum=0.373;QD=12.58;ReadPosRankSum=0.629;VQSLOD=2.0770;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:9:24.08:0,24,383	./.	./.	./.	./.	0/0:53,0:10:27.05:0,27,402	0/0:34,0:8:24.08:0,24,382	0/0:52,0:13:36.09:0,36,543	0/0:45,0:18:48.16:0,48,765	0/0:39,0:2:3.01:0,3,48	./.	0/0:21,0:12:36.12:0,36,574	0/0:49,0:5:15.05:0,15,239	0/0:28,0:12:36.12:0,36,573	1/1:10,16:16:30.10:418,30,0	0/0:32,0:14:36.12:0,36,574	0/0:40,0:7:21.07:0,21,335	0/0:18,0:4:12.04:0,12,191	0/0:37,0:9:27.09:0,27,431	./.	0/0:15,0:3:3.01:0,3,48	0/0:10,0:2:3.01:0,3,48	0/0:7,0:1:3.01:0,3,48	0/0:28,0:5:12.04:0,12,191	0/0:7,0:4:6.02:0,6,96	0/0:62,0:9:24.08:0,24,382	0/0:86,0:7:18.06:0,18,287	0/0:7,0:2:6:0,6,72
chr10	25961668	.	CG	C	3388.65	PASS	AC=50;AF=1.000;AN=50;DP=145;FS=0.000;HRun=3;HaplotypeScore=28.0666;InbreedingCoeff=-0.0731;MQ=35.21;MQ0=16;QD=26.89;VQSLOD=2.3184;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,11:10:18.01:205,18,0	1/1:1,4:5:12.04:148,12,0	./.	./.	1/1:1,5:6:12.03:148,12,0	1/1:1,2:3:3.01:37,3,0	1/1:0,3:3:6.02:74,6,0	1/1:0,4:4:12.04:148,12,0	1/1:0,7:4:9.03:111,9,0	1/1:1,2:3:6.02:74,6,0	1/1:0,11:11:27.08:332,27,0	1/1:0,1:1:3.01:37,3,0	./.	1/1:0,2:2:6.02:74,6,0	1/1:1,2:3:3.01:37,3,0	1/1:0,4:4:9.03:111,9,0	1/1:0,4:3:9.03:112,9,0	1/1:0,1:1:3.01:37,3,0	1/1:0,2:1:3.01:37,3,0	1/1:3,10:12:30.09:370,30,0	1/1:1,3:4:9.03:111,9,0	1/1:1,7:7:18.06:223,18,0	1/1:1,7:7:15.05:185,15,0	1/1:0,2:2:6.02:74,6,0	1/1:0,7:7:21.07:259,21,0	1/1:0,6:5:15.05:185,15,0	1/1:0,3:2:6.02:74,6,0	1/1:0,5:5:15.05:185,15,0
chr10	25969661	.	AC	A	402.68	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.869;DP=610;FS=0.000;HRun=1;HaplotypeScore=62.8853;InbreedingCoeff=0.9973;MQ=69.51;MQ0=1;MQRankSum=-1.228;QD=28.76;ReadPosRankSum=0.207;VQSLOD=3.2217;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,132,2036	0/0:9,0:9:24.07:0,24,360	0/0:25,0:24:70.45:0,70,1081	0/0:26,0:25:69.08:0,69,1035	0/0:29,0:29:87.28:0,87,1350	0/0:15,0:15:42.14:0,42,671	0/0:24,0:24:72.23:0,72,1125	0/0:29,0:29:87.30:0,87,1387	0/0:24,0:24:72.23:0,72,1125	0/0:25,0:25:75.22:0,75,1152	0/0:16,0:16:48.16:0,48,767	0/0:15,0:15:45.15:0,45,719	0/0:22,0:22:66.23:0,66,1055	0/0:17,0:17:51.17:0,51,810	1/1:3,11:14:36.12:497,36,0	0/0:20,0:20:60.19:0,60,936	0/0:21,0:21:63.21:0,63,1002	0/0:14,0:13:36.12:0,36,564	0/0:15,0:15:45.15:0,45,720	0/0:20,0:20:60.20:0,60,954	0/0:38,0:38:99:0,114,1817	0/0:24,0:24:72.23:0,72,1126	0/0:22,0:22:66.22:0,66,1038	0/0:28,0:28:84.24:0,84,1298	0/0:12,0:12:36.12:0,36,576	0/0:29,0:29:87.28:0,87,1365	0/0:20,0:20:60.19:0,60,926	0/0:12,0:12:33.11:0,33,527
chr10	25969705	.	T	TCTCTGGTACA	2235.41	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-3.011;DP=597;FS=0.935;HRun=0;HaplotypeScore=169.6392;InbreedingCoeff=0.9943;MQ=72.12;MQ0=3;MQRankSum=-6.125;QD=124.19;ReadPosRankSum=-0.531;VQSLOD=4.0594;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,114,3582	0/0:9,0:9:27.08:0,27,795	0/0:19,0:18:48.16:0,48,1427	0/0:29,0:25:49.20:0,49,1841	0/0:22,0:22:57.20:0,57,1782	0/0:12,0:12:33.10:0,33,937	0/0:22,0:22:48.16:0,48,1447	0/0:31,0:31:75.26:0,75,2178	0/0:26,0:26:66.23:0,66,1974	0/0:28,0:28:78.27:0,78,2457	0/0:15,0:15:45.13:0,45,1259	0/0:19,0:19:57.20:0,57,1711	0/0:24,0:24:63.22:0,63,1926	0/0:15,0:15:42.14:0,42,1287	1/1:5,13:18:48.16:2330,48,0	0/0:14,0:14:39.13:0,39,1255	0/0:21,0:21:51.17:0,51,1520	0/0:14,0:13:33.03:0,33,816	0/0:16,0:16:42.14:0,42,1217	0/0:22,0:22:66.21:0,66,1984	0/0:34,0:34:87.30:0,87,2725	0/0:28,0:28:66.23:0,66,2017	0/0:21,0:21:51.14:0,51,1515	0/0:29,0:29:78.26:0,78,2364	0/0:8,0:8:24.08:0,24,723	0/0:28,0:28:75.26:0,75,2266	0/0:23,0:23:69.24:0,69,2206	0/0:11,0:11:24.08:0,24,708
chr10	25969938	.	GGTGT	G	326.83	PASS	AB=0.938;AC=15;AF=0.536;AN=28;BaseQRankSum=0.549;DP=535;FS=0.000;HRun=0;HaplotypeScore=83.9351;InbreedingCoeff=0.1371;MQ=54.05;MQ0=31;MQRankSum=1.225;QD=1.54;ReadPosRankSum=0.718;VQSLOD=1.3717;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:36,0:40:0:0,0,0	./.	./.	./.	./.	./.	1/1:18,1:18:3.95:47,4,0	./.	0/1:28,2:30:5.01:123,0,5	0/0:20,0:19:0.47:0,0,1	./.	0/0:10,0:10:0:0,0,0	0/0:16,0:18:5.75:0,6,82	./.	1/1:16,0:18:6.01:56,6,0	1/1:4,0:5:6.01:73,6,0	0/1:25,0:24:10.57:48,0,11	1/1:25,3:25:3.01:46,3,0	./.	./.	./.	0/1:16,0:17:0:0,0,0	./.	./.	./.	0/0:21,0:19:1.24:0,1,3	0/1:10,0:11:14.38:22,0,14	1/1:17,0:15:0.39:1,0,0
chr10	25970927	.	C	CAGATGTGCTTAATGGTATTG	3422.91	PASS	AB=0.889;AC=29;AF=0.967;AN=30;BaseQRankSum=-2.171;DP=46;FS=14.352;HRun=0;HaplotypeScore=29.1485;InbreedingCoeff=-0.1990;MQ=149.82;MQ0=0;MQRankSum=-1.637;QD=87.77;ReadPosRankSum=-1.036;VQSLOD=1.3431;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,0:1:3.01:105,3,0	1/1:0,0:2:3.01:59,3,0	1/1:2,1:7:6.01:1327,6,0	0/1:7,1:8:30.09:972,0,30	./.	./.	1/1:1,0:3:6.02:198,6,0	1/1:2,0:3:6.01:152,6,0	./.	./.	./.	./.	1/1:3,0:3:2.97:20,3,0	1/1:0,0:1:3.01:105,3,0	./.	./.	1/1:1,0:1:3.01:48,3,0	1/1:1,0:2:3.01:92,3,0	./.	1/1:1,0:2:6.01:119,6,0	./.	./.	./.	1/1:0,0:2:3.01:90,3,0	1/1:2,0:2:2.97:20,3,0	1/1:0,0:1:3.01:98,3,0	1/1:1,0:1:2.97:20,3,0	./.
chr10	25971843	.	GT	G	350.82	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.968;DP=609;FS=8.021;HRun=3;HaplotypeScore=101.0873;InbreedingCoeff=0.9697;MQ=85.31;MQ0=0;MQRankSum=-2.709;QD=29.24;ReadPosRankSum=0.518;VQSLOD=2.4493;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:93.31:0,93,1331	0/0:5,0:5:15.04:0,15,198	0/0:24,0:24:65.43:0,65,942	0/0:41,0:41:99:0,111,1502	0/0:7,0:7:18.02:0,18,235	0/0:13,0:13:27.07:0,27,355	0/0:27,0:27:78.26:0,78,1118	0/0:19,0:19:54.18:0,54,774	0/0:40,0:40:99:0,120,1699	0/0:26,0:26:75.25:0,75,1072	0/0:7,0:7:21.07:0,21,301	0/0:18,0:18:51.13:0,51,708	0/0:18,0:18:54.13:0,54,731	0/0:29,0:29:84.28:0,84,1203	1/1:0,12:12:36.11:446,36,0	0/0:21,0:21:60.12:0,60,797	0/0:26,0:26:78.25:0,78,1097	0/0:19,0:19:54.18:0,54,777	0/0:17,0:16:42.10:0,42,550	0/0:10,0:10:27.08:0,27,370	0/0:61,0:61:99:0,169,2377	0/0:10,0:10:30.06:0,30,405	0/0:12,0:12:36.09:0,36,492	0/0:35,0:35:93.31:0,93,1321	0/0:10,0:10:30.10:0,30,431	0/0:23,0:23:63.18:0,63,884	0/0:22,0:22:66.22:0,66,946	0/0:21,0:21:63.21:0,63,907
chr10	25972525	.	TC	T	527.52	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.458;DP=546;FS=0.894;HRun=2;HaplotypeScore=56.3439;InbreedingCoeff=0.9984;MQ=75.42;MQ0=0;MQRankSum=-2.569;QD=29.31;ReadPosRankSum=0.439;VQSLOD=3.2156;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:69.17:0,69,944	0/0:11,0:11:33.09:0,33,451	0/0:30,0:29:37.66:0,38,819	0/0:21,0:21:37.82:0,38,734	0/0:18,0:18:51.09:0,51,711	0/0:22,0:22:60.15:0,60,854	0/0:18,0:18:54.17:0,54,778	0/0:27,0:27:78.25:0,78,1150	0/0:26,0:26:78.23:0,78,1111	0/0:19,0:19:57.18:0,57,835	0/0:19,0:19:57.18:0,57,834	0/0:15,0:15:45.13:0,45,637	0/0:18,0:18:54.18:0,54,808	0/0:15,0:15:45.15:0,45,674	1/1:0,18:18:48.16:622,48,0	0/0:10,0:10:30.08:0,30,428	0/0:28,0:28:84.26:0,84,1229	0/0:15,0:15:45.09:0,45,627	0/0:16,0:16:48.16:0,48,719	0/0:19,0:19:57.18:0,57,827	0/0:30,0:30:90.29:0,90,1328	0/0:15,0:15:42.12:0,42,591	0/0:23,0:23:69.22:0,69,1001	0/0:24,0:24:66.19:0,66,942	0/0:16,0:16:45.14:0,45,654	0/0:21,0:21:63.20:0,63,908	0/0:18,0:18:54.16:0,54,771	0/0:10,0:10:30.07:0,30,408
chr10	25972774	.	ATGTGTGTATG	A	85.88	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.265;DP=547;FS=7.181;HRun=0;HaplotypeScore=154.4640;InbreedingCoeff=0.9134;MQ=62.74;MQ0=11;MQRankSum=-2.311;QD=5.05;ReadPosRankSum=-1.120;VQSLOD=1.8834;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:86.97:0,87,1881	0/0:8,0:8:21.02:0,21,635	0/0:23,0:13:35.82:0,36,335	0/0:23,0:9:18.30:0,18,186	0/0:19,0:19:41.97:0,42,628	0/0:16,0:16:35.31:0,35,1204	0/0:26,0:25:59.96:0,60,1023	0/0:26,0:24:69.02:0,69,800	0/0:17,0:17:45.55:0,46,1327	0/0:16,0:16:35.56:0,36,713	0/0:9,0:9:27.05:0,27,742	0/0:16,0:20:42.11:0,42,1503	0/0:12,0:12:30.02:0,30,836	0/0:16,0:16:42.42:0,42,738	1/1:4,12:17:8.89:169,9,0	0/0:14,0:14:30.07:0,30,1123	0/0:22,0:22:44.93:0,45,1234	0/0:13,0:13:35.89:0,36,850	0/0:16,0:16:25.36:0,25,534	0/0:30,0:29:59.96:0,60,1430	0/0:27,0:27:63.38:0,63,1881	0/0:29,0:29:57.34:0,57,1523	0/0:18,0:18:21.08:0,21,929	0/0:29,0:29:78.06:0,78,2076	0/0:15,0:15:30.37:0,30,675	0/0:19,0:19:45.07:0,45,945	0/0:19,0:19:35.60:0,36,900	0/0:10,0:8:21.05:0,21,676
chr10	25972782	.	A	ATG	1505.98	PASS	AB=0.928;AC=31;AF=0.596;AN=52;BaseQRankSum=-1.783;DP=596;FS=4.955;HRun=0;HaplotypeScore=90.1351;InbreedingCoeff=-0.3236;MQ=57.23;MQ0=16;MQRankSum=0.280;QD=3.09;ReadPosRankSum=-1.712;VQSLOD=1.5848;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:13.47:0,13,109	1/1:13,0:13:11.80:91,12,0	./.	0/1:21,0:7:0:0,0,0	1/1:17,4:22:3:44,3,0	1/1:16,0:15:5.98:50,6,0	0/1:19,4:23:2.14:103,0,2	./.	0/1:20,0:20:12.62:101,0,13	0/1:19,0:19:18.47:73,0,18	0/1:12,0:11:4.91:27,0,5	0/1:17,0:17:23.53:46,0,24	1/1:9,4:14:3.01:44,3,0	0/1:19,0:19:16.48:16,0,18	0/0:16,0:16:8.52:0,9,43	0/1:11,0:11:28.18:28,0,45	0/1:20,0:20:61.57:81,0,62	1/1:17,0:17:22.28:120,22,0	1/1:23,0:23:4.56:24,5,0	0/1:21,9:31:66.26:72,0,66	1/1:28,3:31:10.06:209,10,0	0/1:23,6:28:52.52:77,0,53	0/1:23,0:23:23.67:52,0,24	0/1:33,1:34:45.86:192,0,46	0/1:20,0:19:0.13:59,0,0	0/1:17,3:21:24.77:58,0,25	0/1:11,7:18:23.10:50,0,23	0/1:9,2:8:35.43:35,0,38
chr10	25974334	.	G	GAT	88.51	PASS	AB=0.909;AC=6;AF=0.60;AN=10;BaseQRankSum=-0.720;DP=50;FS=4.771;HRun=0;HaplotypeScore=20.5681;MQ=46.66;MQ0=1;MQRankSum=0.000;QD=5.90;ReadPosRankSum=0.720;VQSLOD=1.7306;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:1,0:1:0.47:0,0,1	./.	./.	./.	./.	./.	./.	1/1:3,0:2:3.01:32,3,0	./.	./.	./.	1/1:0,1:1:3.01:45,3,0	./.	./.	0/1:2,0:2:0:0,0,0	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	0/1:7,2:9:17.22:79,0,17
chr10	25975295	.	TGGC	T	877.55	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=7.057;DP=594;FS=6.155;HRun=0;HaplotypeScore=74.0084;InbreedingCoeff=0.6482;MQ=55.71;MQ0=6;MQRankSum=2.023;QD=22.50;ReadPosRankSum=1.510;VQSLOD=3.0603;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:17:48.16:0,48,1163	0/0:8,0:8:21.07:0,21,518	0/1:20,0:4:8.55:9,0,122	0/0:19,0:4:9.03:0,9,222	0/0:22,0:22:63.20:0,63,1427	0/0:26,0:25:69.24:0,69,1679	0/0:13,0:12:36.12:0,36,863	0/0:31,0:31:90.30:0,90,2114	0/0:14,0:14:42.14:0,42,1009	0/0:32,0:32:87.29:0,87,2099	0/0:21,0:18:45.15:0,45,1061	0/0:16,0:16:48.16:0,48,1158	0/0:15,0:14:42.14:0,42,1035	0/0:13,0:12:36.12:0,36,887	1/1:1,18:19:54.14:971,54,0	0/0:10,0:10:30.10:0,30,738	0/0:24,0:24:69.24:0,69,1600	0/0:18,0:18:54.19:0,54,1329	0/0:29,0:25:69.23:0,69,1627	0/0:43,0:43:99:0,129,3033	0/0:18,0:18:54.19:0,54,1313	0/0:33,0:32:87.30:0,87,2039	0/0:27,0:27:78.25:0,78,1842	0/0:18,0:18:54.18:0,54,1295	0/0:12,0:12:36.12:0,36,861	0/0:25,0:23:66.23:0,66,1569	0/0:28,0:28:84.29:0,84,2013	0/0:22,0:22:66.23:0,66,1627
chr10	25976172	.	ATC	A	567.62	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.183;DP=646;FS=5.168;HRun=0;HaplotypeScore=77.7538;InbreedingCoeff=0.9156;MQ=57.68;MQ0=9;MQRankSum=1.814;QD=31.53;ReadPosRankSum=1.806;VQSLOD=5.5326;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,102,1936	0/0:4,0:4:12.04:0,12,230	0/0:25,0:10:24.08:0,24,444	0/0:16,0:4:9.03:0,9,166	0/0:39,0:39:99:0,105,1872	0/0:30,0:30:90.27:0,90,1647	0/0:15,0:15:45.13:0,45,782	0/0:21,0:19:57.19:0,57,1056	0/0:30,0:30:87.28:0,87,1593	0/0:32,0:32:93.30:0,93,1710	0/0:22,0:22:66.21:0,66,1225	0/0:17,0:17:51.14:0,51,904	0/0:12,0:12:36.08:0,36,652	0/0:15,0:15:45.14:0,45,822	1/1:0,18:18:45.11:662,45,0	0/0:12,0:12:36.10:0,36,624	0/0:29,0:29:78.23:0,78,1407	0/0:24,0:24:66.09:0,66,1101	0/0:30,0:18:54.19:0,54,1034	0/0:34,0:34:99:0,99,1871	0/0:31,0:31:87.28:0,87,1574	0/0:33,0:32:93.31:0,93,1725	0/0:15,0:15:45.14:0,45,817	0/0:12,0:12:36.12:0,36,677	0/0:27,0:27:78.24:0,78,1403	0/0:26,0:26:75.26:0,75,1426	0/0:28,0:28:78.19:0,78,1345	0/0:9,0:9:27.09:0,27,517
chr10	25977200	.	CT	C	10693.14	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-2.381;DP=563;FS=1.193;HRun=10;HaplotypeScore=58.6151;InbreedingCoeff=0.7837;MQ=60.35;MQ0=14;MQRankSum=2.499;QD=20.37;ReadPosRankSum=2.793;VQSLOD=5.7621;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,27:30:71.97:625,72,0	1/1:0,9:9:23.99:208,24,0	0/0:21,0:4:5.57:0,6,31	0/0:16,0:9:7.51:0,8,131	1/1:2,22:24:2.62:480,3,0	1/1:2,18:20:47.99:417,48,0	1/1:2,13:14:23.98:208,24,0	1/1:7,24:28:62.95:542,63,0	1/1:2,20:21:56.99:495,57,0	1/1:2,23:25:68.98:599,69,0	1/1:2,24:26:38.83:565,39,0	1/1:2,9:11:23.99:208,24,0	1/1:1,15:16:44.99:391,45,0	1/1:2,10:12:29.99:260,30,0	1/1:2,19:21:50.99:443,51,0	1/1:2,12:14:35.99:313,36,0	1/1:2,40:42:95.11:916,95,0	1/1:3,19:23:29.56:372,30,0	1/1:4,12:13:32.98:286,33,0	1/1:3,28:31:77.97:677,78,0	1/1:0,11:11:32.99:287,33,0	1/1:2,16:18:44.99:390,45,0	1/1:4,18:22:44.98:391,45,0	1/1:2,9:11:20.99:182,21,0	1/1:6,11:17:29.98:260,30,0	1/1:3,17:20:50.98:443,51,0	1/1:6,27:33:74.97:651,75,0	1/1:1,3:5:11.03:84,11,0
chr10	25977551	.	TAAAG	T	474.34	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.141;DP=507;FS=2.586;HRun=0;HaplotypeScore=82.0934;InbreedingCoeff=0.9794;MQ=57.99;MQ0=6;MQRankSum=-1.124;QD=33.88;ReadPosRankSum=1.320;VQSLOD=3.5956;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:78.11:0,78,1786	0/0:8,0:8:18.06:0,18,461	0/0:23,0:9:21.05:0,21,409	0/0:15,0:9:21.06:0,21,391	0/0:29,0:29:84.23:0,84,1864	0/0:19,0:19:54.05:0,54,1269	0/0:16,0:16:45.07:0,45,1046	0/0:23,0:23:45.14:0,45,986	0/0:18,0:18:54.09:0,54,1245	0/0:26,0:26:72.23:0,72,1714	0/0:24,0:24:69.22:0,69,1676	0/0:12,0:12:30.09:0,30,682	0/0:9,0:9:24.07:0,24,537	0/0:15,0:15:36.05:0,36,832	1/1:1,13:14:33.11:569,33,0	0/0:13,0:13:30.10:0,30,746	0/0:18,1:19:45.14:0,45,1071	0/0:19,0:19:54.13:0,54,1170	0/0:21,0:20:54.05:0,54,1260	0/0:31,0:31:84.21:0,84,2005	0/0:11,0:11:33.10:0,33,768	0/0:18,0:18:54.19:0,54,1363	0/0:15,0:15:45.13:0,45,982	0/0:17,1:18:51.09:0,51,1205	0/0:12,0:12:36.12:0,36,929	0/0:18,0:18:42.10:0,42,1005	0/0:21,0:21:54.66:0,55,1363	0/0:10,0:10:27.09:0,27,666
chr10	25977672	.	C	CA	206.89	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=5.019;DP=560;FS=26.230;HRun=5;HaplotypeScore=119.4289;InbreedingCoeff=0.6612;MQ=60.94;MQ0=8;MQRankSum=-3.425;QD=7.66;ReadPosRankSum=-0.326;VQSLOD=-0.1965;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:36.09:0,36,386	0/0:8,0:8:17.89:0,18,170	0/0:54,0:25:42.27:0,42,488	0/0:63,0:34:57.34:0,57,673	0/0:23,0:23:44.68:0,45,450	0/0:20,0:20:42.09:0,42,441	0/0:20,0:20:53.77:0,54,508	0/0:22,0:22:58.94:0,59,601	0/0:17,0:17:36.04:0,36,372	0/0:25,0:25:62.96:0,63,647	0/0:17,0:17:35.30:0,35,360	0/0:15,0:15:21:0,21,205	0/0:10,0:10:18.05:0,18,193	0/0:15,0:15:35.96:0,36,357	1/1:6,6:12:35.39:301,35,0	0/0:9,0:9:9.02:0,9,96	0/0:13,0:13:23.13:0,23,283	0/0:5,0:5:15.04:0,15,160	0/0:19,0:19:54.01:0,54,560	0/0:26,0:26:57.08:0,57,596	0/0:11,0:11:14.07:0,14,135	0/0:18,0:18:38.83:0,39,396	0/0:23,0:23:36.93:0,37,368	0/1:15,0:14:3.77:4,0,156	0/0:26,0:26:41.97:0,42,422	0/0:21,0:21:51.03:0,51,531	0/0:24,0:24:57.06:0,57,580	0/0:6,0:6:18:0,18,180
chr10	25977675	.	AAACC	A	204.69	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.973;DP=562;FS=11.901;HRun=0;HaplotypeScore=140.7392;InbreedingCoeff=0.8379;MQ=61.23;MQ0=9;MQRankSum=-2.461;QD=17.06;ReadPosRankSum=-0.176;VQSLOD=2.9265;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:45.14:0,45,1002	0/0:8,0:8:18.04:0,18,415	0/0:54,0:23:56.25:0,56,997	0/0:65,0:35:81.33:0,81,1834	0/0:23,0:23:48.61:0,49,1123	0/0:20,0:20:45.13:0,45,1071	0/0:23,0:23:60.88:0,61,1445	0/0:27,0:24:63.10:0,63,1377	0/0:16,0:16:36.12:0,36,912	0/0:24,0:24:63.21:0,63,1531	0/0:17,0:17:36.11:0,36,738	0/0:14,0:14:21.05:0,21,465	0/0:10,0:10:18.06:0,18,473	0/0:13,0:13:36.04:0,36,882	1/1:8,4:12:27.40:299,27,0	0/0:9,0:9:9.03:0,9,233	0/0:14,0:14:30.08:0,30,706	0/0:6,0:5:15.05:0,15,356	0/0:20,0:20:57.19:0,57,1336	0/0:24,0:24:57.19:0,57,1415	0/0:11,0:11:15.05:0,15,385	0/0:18,0:18:42.14:0,42,1045	0/0:22,0:22:39.08:0,39,830	0/0:14,0:12:7.98:0,8,437	0/0:26,0:26:48.16:0,48,1264	0/0:19,0:19:51.07:0,51,1365	0/0:24,0:24:57.15:0,57,1328	0/0:6,0:6:18.06:0,18,471
chr10	25977702	.	C	CAAAA	3038.32	PASS	AB=0.990;AC=25;AF=0.446;AN=56;BaseQRankSum=8.124;DP=515;FS=8.843;HRun=4;HaplotypeScore=129.6972;InbreedingCoeff=-0.4360;MQ=56.00;MQ0=9;MQRankSum=-7.667;QD=8.37;ReadPosRankSum=2.352;VQSLOD=-0.4288;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:18.18:0,18,212	1/1:7,0:7:11.05:89,11,0	0/0:41,0:21:55.15:0,55,1030	0/0:45,0:24:48.80:0,49,721	0/1:24,0:24:81.79:82,0,217	0/1:17,0:17:42.10:42,0,255	0/1:20,2:22:99:520,0,697	0/1:33,4:33:99:895,0,229	0/1:19,0:19:2.43:2,0,182	0/1:23,0:23:99:258,0,482	0/1:17,0:17:40.96:41,0,135	0/1:14,0:14:9.56:10,0,59	1/1:8,0:8:2.68:11,3,0	0/0:17,0:17:6.11:0,6,132	0/1:6,0:6:33.59:34,0,69	0/0:8,0:8:3.48:0,3,63	0/1:13,0:13:64.32:64,0,153	0/1:4,0:3:41.43:41,0,75	0/1:26,0:26:99:183,0,780	0/0:21,0:21:21.69:0,22,475	0/1:10,0:10:44.92:45,0,58	0/1:18,0:18:99:119,0,303	0/1:21,0:21:49.43:49,0,82	0/1:10,0:10:12.40:80,0,12	0/1:23,0:23:56.05:131,0,56	0/1:25,0:24:99:474,0,341	0/1:18,0:18:16.20:16,0,116	1/1:1,0:1:2.68:11,3,0
chr10	25977707	.	AC	A	1326.46	PASS	AB=0.952;AC=18;AF=0.321;AN=56;BaseQRankSum=2.581;DP=521;FS=6.303;HRun=2;HaplotypeScore=127.7876;InbreedingCoeff=-0.1782;MQ=57.80;MQ0=9;MQRankSum=-5.163;QD=4.53;ReadPosRankSum=-0.754;VQSLOD=0.1010;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:21,0:21:2.36:2,0,129	0/1:9,0:9:26.45:26,0,32	0/0:33,0:21:59.61:0,60,808	0/0:44,1:27:43.31:0,43,643	0/1:24,0:24:41.94:42,0,143	0/0:18,0:18:11.81:0,12,169	0/1:15,8:23:99:197,0,450	0/1:12,27:35:87.20:618,0,87	0/0:18,0:18:17.68:0,18,136	0/1:23,0:23:10.85:11,0,373	0/1:17,0:17:8.46:8,0,80	0/0:15,0:15:8.68:0,9,87	0/0:8,0:8:2.84:0,3,14	0/0:16,0:16:14.87:0,15,148	1/1:4,1:5:15.05:188,15,0	0/0:10,0:10:6:0,6,51	0/1:14,0:14:8.06:8,0,67	0/1:4,0:3:35.71:50,0,36	0/1:25,0:25:99:149,0,337	0/0:22,0:22:27.02:0,27,320	1/1:10,0:10:2.96:19,3,0	0/1:22,0:22:29.20:29,0,209	0/1:20,0:20:4.85:5,0,73	0/1:11,0:11:6.29:17,0,6	0/0:23,0:23:7.18:0,7,176	0/1:26,0:25:99:112,0,286	0/0:19,0:19:20.54:0,21,169	0/0:1,0:1:2.84:0,3,14
chr10	25977708	.	C	CCAAAACAAAACAAAA	26332.81	PASS	AB=1.000;AC=51;AF=0.911;AN=56;BaseQRankSum=-5.814;DP=597;FS=2.281;HRun=0;HaplotypeScore=134.0699;InbreedingCoeff=0.5179;MQ=58.28;MQ0=8;MQRankSum=-6.291;QD=50.74;ReadPosRankSum=3.373;VQSLOD=4.7363;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:3,0:26:21.07:681,21,0	1/1:0,9:10:12.04:752,12,0	0/0:33,0:22:50.27:0,50,1176	0/0:42,0:27:35.32:0,35,776	1/1:4,17:29:33.01:1122,33,0	1/1:4,13:20:12.04:861,12,0	1/1:23,0:24:51.16:2158,51,0	1/1:38,0:34:77.04:2198,77,0	1/1:2,14:23:12.04:846,12,0	1/1:0,20:28:68.56:2941,69,0	1/1:1,16:19:12.04:365,12,0	1/1:2,12:17:6.30:424,6,0	1/1:0,7:9:3.01:219,3,0	1/1:3,13:18:12.04:825,12,0	0/1:5,0:5:6.15:6,0,266	1/1:2,8:14:3.01:207,3,0	1/1:4,10:21:9.03:572,9,0	1/1:4,0:3:5.69:128,6,0	1/1:4,15:30:81.17:2585,81,0	1/1:5,13:25:20.87:603,21,0	1/1:1,6:11:3.01:218,3,0	1/1:3,18:24:18.06:990,18,0	1/1:0,19:27:17.91:868,18,0	1/1:1,10:14:9.03:398,9,0	1/1:2,19:26:27.09:1910,27,0	1/1:3,23:31:66.70:3174,67,0	1/1:2,16:24:14.26:1063,14,0	1/1:0,1:1:3.01:219,3,0
chr10	25977933	.	ACACCCTTCCACCCTT	A	1702.31	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.588;DP=562;FS=3.640;HRun=0;HaplotypeScore=227.3404;InbreedingCoeff=0.9613;MQ=88.68;MQ0=0;MQRankSum=-5.023;QD=94.57;ReadPosRankSum=0.313;VQSLOD=3.5411;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,160,10853	0/0:6,0:5:18.06:0,18,1321	0/0:27,0:27:81.28:0,81,4233	0/0:24,0:24:46.11:0,46,4101	0/0:18,0:18:54.19:0,54,3870	0/0:27,0:26:81.28:0,81,5859	0/0:13,0:13:36.12:0,36,2303	0/0:27,0:27:78.27:0,78,5205	0/0:22,0:22:66.20:0,66,4256	0/0:18,0:18:54.19:0,54,3522	0/0:22,0:22:66.23:0,66,4290	0/0:21,0:21:63.20:0,63,4275	0/0:15,0:15:45.11:0,45,2807	0/0:13,0:13:39.13:0,39,2934	1/1:5,13:18:42.14:1797,42,0	0/0:12,0:12:33.11:0,33,2361	0/0:27,0:26:81.26:0,81,5421	0/0:4,0:4:12.04:0,12,674	0/0:11,0:11:27.09:0,27,1954	0/0:32,0:32:96.31:0,96,6632	0/0:25,0:25:72.25:0,72,5204	0/0:22,0:22:66.23:0,66,4525	0/0:18,0:18:54.18:0,54,3602	0/0:12,0:12:36.11:0,36,2214	0/0:14,0:14:42.14:0,42,2983	0/0:22,0:22:66.23:0,66,4918	0/0:21,0:21:63.20:0,63,4547	0/0:16,0:16:48.16:0,48,3250
chr10	25977960	.	C	CT	532.61	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.474;DP=580;FS=9.258;HRun=1;HaplotypeScore=67.8774;InbreedingCoeff=0.9415;MQ=93.50;MQ0=0;MQRankSum=-5.099;QD=29.59;ReadPosRankSum=1.310;VQSLOD=2.4406;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,138,1792	0/0:9,0:8:27.09:0,27,350	0/0:37,0:37:99:0,108,1360	0/0:32,0:32:76.62:0,77,1022	0/0:21,0:21:54.18:0,54,700	0/0:25,0:24:75.24:0,75,970	0/0:8,0:8:24.06:0,24,289	0/0:33,0:33:93.30:0,93,1205	0/0:20,0:20:57.19:0,57,740	0/0:17,0:17:51.12:0,51,640	0/0:22,0:22:63.19:0,63,804	0/0:19,0:19:57.19:0,57,740	0/0:18,0:18:54.18:0,54,701	0/0:17,0:17:51.17:0,51,661	1/1:1,17:18:42.61:627,43,0	0/0:13,0:13:39.13:0,39,506	0/0:21,0:20:63.19:0,63,803	0/0:3,0:3:9.03:0,9,110	0/0:16,0:16:45.11:0,45,566	0/0:33,0:33:93.30:0,93,1206	0/0:23,0:23:69.22:0,69,895	0/0:24,0:24:72.22:0,72,917	0/0:18,0:18:48.16:0,48,623	0/0:11,0:11:30.10:0,30,389	0/0:15,0:15:45.13:0,45,557	0/0:23,0:23:69.22:0,69,883	0/0:27,0:27:81.26:0,81,1050	0/0:10,0:10:30.10:0,30,389
chr10	25981149	.	AAAC	A	15086.98	PASS	AB=1.000;AC=51;AF=0.911;AN=56;BaseQRankSum=-3.736;DP=546;FS=1.952;HRun=0;HaplotypeScore=91.7602;InbreedingCoeff=0.7459;MQ=72.11;MQ0=1;MQRankSum=0.039;QD=29.58;ReadPosRankSum=3.078;VQSLOD=5.2873;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,23:25:57.19:849,57,0	1/1:0,12:12:36.12:529,36,0	0/0:21,0:17:20.25:0,20,388	0/0:14,0:14:13.51:0,14,291	1/1:2,27:29:77.99:1028,78,0	1/1:1,17:18:33.11:492,33,0	1/1:1,5:6:12.04:179,12,0	1/1:4,9:12:24.05:301,24,0	1/1:3,18:21:39.13:581,39,0	1/1:2,27:29:81.22:1128,81,0	1/1:4,23:27:63.21:929,63,0	1/1:3,11:14:30.05:422,30,0	1/1:5,10:15:20.91:313,21,0	1/1:2,13:15:24.08:358,24,0	0/1:15,0:15:65.38:65,0,66	1/1:3,8:11:18.06:268,18,0	1/1:4,18:22:26.41:540,26,0	1/1:2,10:12:18.06:268,18,0	1/1:6,13:18:36.11:515,36,0	1/1:1,34:35:90.10:1211,90,0	1/1:4,15:19:30.10:447,30,0	1/1:1,14:15:39.13:581,39,0	1/1:3,23:26:44.99:670,45,0	1/1:6,18:24:39.13:582,39,0	1/1:1,14:15:24.08:358,24,0	1/1:2,24:25:69.17:948,69,0	1/1:4,33:37:78.26:1164,78,0	1/1:0,10:10:23.86:358,24,0
chr10	25981169	.	C	CCA	183.62	PASS	AB=0.688;AC=1;AF=0.018;AN=56;BaseQRankSum=3.764;DP=547;FS=4.092;HRun=0;HaplotypeScore=128.0376;InbreedingCoeff=-0.0197;MQ=60.17;MQ0=4;MQRankSum=-3.517;QD=16.69;ReadPosRankSum=0.605;VQSLOD=3.2483;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:75.13:0,75,1150	0/0:13,0:13:33.49:0,33,502	0/0:17,0:9:26.70:0,27,338	0/0:16,0:9:18.52:0,19,258	0/0:33,0:33:87.30:0,87,1301	0/0:18,0:18:39.06:0,39,576	0/0:5,0:5:12.04:0,12,194	0/0:17,0:15:45.15:0,45,729	0/0:20,0:20:39.13:0,39,628	0/0:29,0:28:81.27:0,81,1285	0/0:26,0:26:69.04:0,69,959	0/0:13,0:13:36.11:0,36,548	0/0:14,0:14:30.01:0,30,486	0/0:15,0:15:30.10:0,30,485	0/1:6,5:11:60.72:258,0,61	0/0:10,0:10:27.05:0,27,407	0/0:19,0:19:48.09:0,48,721	0/0:14,0:14:30.06:0,30,438	0/0:16,0:14:37.35:0,37,564	0/0:36,0:36:96.53:0,97,1507	0/0:18,0:18:42.07:0,42,642	0/0:22,0:22:53.66:0,54,833	0/0:23,0:23:53.94:0,54,779	0/0:26,0:26:60.20:0,60,948	0/0:16,0:16:36.11:0,36,560	0/0:24,0:23:66.20:0,66,1043	0/0:33,0:33:90.31:0,90,1446	0/0:12,0:12:30.10:0,30,483
chr10	25981828	.	CATATATATATATATATATATATATATATATATATAT	C	12228.56	PASS	AB=0.838;AC=38;AF=0.792;AN=48;BaseQRankSum=0.798;DP=361;FS=3.698;HRun=0;HaplotypeScore=298.2236;InbreedingCoeff=0.2321;MQ=60.76;MQ0=2;MQRankSum=0.776;QD=42.61;ReadPosRankSum=2.898;VQSLOD=3.2498;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	1/1:7,1:10:9.03:776,9,0	./.	0/0:22,0:7:9.03:0,9,217	1/1:12,9:21:12.04:1047,12,0	1/1:3,4:7:9.03:799,9,0	0/0:8,0:8:0:0,0,0	0/0:13,0:13:3:0,3,27	1/1:13,2:15:3.01:274,3,0	1/1:13,0:13:3:100,3,0	1/1:12,14:26:15.05:1279,15,0	1/1:10,4:14:3.01:274,3,0	1/1:14,4:18:6.02:547,6,0	1/1:12,5:17:12.04:1094,12,0	1/1:5,0:5:2.90:16,3,0	1/1:3,4:7:6.02:547,6,0	./.	./.	0/1:7,5:12:25.11:425,0,25	1/1:11,9:19:15.05:1368,15,0	0/1:7,0:7:0:0,0,0	1/1:8,5:13:8.99:567,9,0	0/1:13,2:15:38.93:256,0,39	1/1:6,2:8:3.01:274,3,0	1/1:6,5:11:12.04:1036,12,0	1/1:13,6:19:15.01:647,15,0	0/1:11,4:16:0.94:787,0,1	1/1:12,0:12:7.25:116,7,0
chr10	25982388	.	T	TA	339.92	PASS	AB=0.933;AC=3;AF=0.054;AN=56;BaseQRankSum=3.746;DP=452;FS=0.000;HRun=5;HaplotypeScore=43.5862;InbreedingCoeff=0.7546;MQ=66.84;MQ0=0;MQRankSum=-0.884;QD=12.59;ReadPosRankSum=1.116;VQSLOD=1.0024;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:34:90.22:0,90,967	0/0:11,0:11:27.04:0,27,280	0/0:13,0:10:27.05:0,27,282	0/0:10,0:8:15.02:0,15,153	0/0:29,0:29:78.19:0,78,836	0/0:13,0:13:36.09:0,36,387	0/0:9,0:9:24.06:0,24,258	0/0:33,0:33:81.19:0,81,863	0/0:8,0:8:24.04:0,24,249	0/0:22,0:22:57.14:0,57,612	0/0:21,0:21:60.14:0,60,637	0/0:15,0:15:39.10:0,39,419	0/0:6,0:6:15.04:0,15,161	0/0:14,0:14:42.11:0,42,451	1/1:0,13:13:33.11:434,33,0	0/0:9,0:9:27.04:0,27,274	0/0:13,0:13:39.10:0,39,419	0/1:13,1:14:0.37:0,0,347	0/0:10,0:10:27.07:0,27,290	0/0:19,0:19:51.11:0,51,540	0/0:7,0:7:21.05:0,21,226	0/0:20,0:20:42.09:0,42,444	0/0:16,0:16:45.11:0,45,483	0/0:9,0:9:27.03:0,27,277	0/0:20,0:20:57.10:0,57,588	0/0:28,0:28:81.20:0,81,870	0/0:27,0:26:72.18:0,72,773	0/0:9,0:9:27:0,27,267
chr10	25982522	.	A	ATT	312.65	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-4.851;DP=499;FS=0.000;HRun=6;HaplotypeScore=57.9845;InbreedingCoeff=0.9747;MQ=76.21;MQ0=1;MQRankSum=-2.222;QD=24.05;ReadPosRankSum=0.558;VQSLOD=1.5190;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,105,1281	0/0:5,0:5:15.05:0,15,183	0/0:16,0:16:42.11:0,42,512	0/0:13,0:14:33.08:0,33,382	0/0:18,0:18:48.15:0,48,581	0/0:27,0:27:78.24:0,78,951	0/0:16,0:16:45.14:0,45,549	0/0:32,0:32:87.25:0,87,1041	0/0:20,0:20:48.14:0,48,586	0/0:25,0:25:72.06:0,72,853	0/0:18,0:18:48.04:0,48,564	0/0:13,0:13:36.11:0,36,439	0/0:12,0:12:24.07:0,24,292	0/0:14,0:14:42.13:0,42,506	1/1:2,11:12:24.08:406,24,0	0/0:20,0:20:57.18:0,57,695	0/0:15,0:15:39.12:0,39,476	0/0:12,0:12:30.09:0,30,363	0/0:17,0:17:39.12:0,39,475	0/0:16,0:16:42.12:0,42,511	0/0:11,0:11:33.09:0,33,390	0/0:12,0:12:30.09:0,30,366	0/0:24,0:24:63.19:0,63,768	0/0:14,0:14:39.12:0,39,475	0/0:21,0:21:57.17:0,57,691	0/0:27,0:27:78.24:0,78,952	0/0:24,0:24:69.21:0,69,841	0/0:7,0:7:21.07:0,21,256
chr10	25983770	.	G	GAA	527.73	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.632;DP=387;FS=2.472;HRun=3;HaplotypeScore=48.7781;InbreedingCoeff=0.7628;MQ=66.36;MQ0=0;MQRankSum=-1.704;QD=40.59;ReadPosRankSum=1.067;VQSLOD=3.2128;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:27.09:0,27,378	0/0:4,0:4:12.04:0,12,168	0/0:7,0:7:21.06:0,21,279	0/0:3,0:3:5.97:0,6,61	0/0:24,0:24:66.22:0,66,923	0/0:20,0:20:51.11:0,51,659	0/0:7,0:7:21.05:0,21,276	0/0:25,0:25:60.20:0,60,838	0/0:17,0:17:48.15:0,48,649	0/0:20,0:20:54.15:0,54,712	0/0:26,0:26:75.24:0,75,1033	0/0:8,0:8:24.08:0,24,334	0/0:9,0:9:24.08:0,24,336	0/0:6,0:6:15.05:0,15,210	1/1:1,12:13:36.12:622,36,0	0/0:14,0:14:36.12:0,36,504	0/0:27,0:27:72.24:0,72,1006	0/0:21,0:21:42.14:0,42,582	0/0:19,0:19:57.18:0,57,780	0/0:18,0:18:51.17:0,51,714	0/0:4,0:4:12.04:0,12,168	0/0:7,0:7:21.07:0,21,292	0/0:14,0:14:39.13:0,39,546	0/0:2,0:2:6.02:0,6,84	0/0:11,0:11:33.11:0,33,460	0/0:17,0:17:48.16:0,48,671	0/0:20,0:20:60.20:0,60,839	0/0:12,0:12:36.12:0,36,498
chr10	25983981	.	C	CA	300.36	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.169;DP=452;FS=6.269;HRun=5;HaplotypeScore=44.0957;InbreedingCoeff=0.9179;MQ=72.62;MQ0=0;MQRankSum=-0.709;QD=27.31;ReadPosRankSum=1.220;VQSLOD=3.2463;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:24.06:0,24,258	0/0:6,0:6:15.04:0,15,161	0/0:9,0:9:9.02:0,9,94	0/0:8,0:8:20.85:0,21,195	0/0:30,0:30:84.18:0,84,886	0/0:17,0:17:51.11:0,51,539	0/0:13,0:13:27.07:0,27,290	0/0:29,0:29:78.18:0,78,833	0/0:14,0:14:42.11:0,42,451	0/0:22,0:22:66.15:0,66,701	0/0:35,0:35:96.18:0,96,1000	0/0:7,0:7:21.05:0,21,226	0/0:17,0:17:48.12:0,48,515	0/0:9,0:9:27.07:0,27,290	1/1:1,10:11:30.10:395,30,0	0/0:12,0:12:33.07:0,33,347	0/0:17,0:17:38.68:0,39,397	0/0:13,0:13:36.09:0,36,387	0/0:34,0:34:53.56:0,54,879	0/0:22,0:22:60.13:0,60,637	0/0:10,0:10:30.05:0,30,312	0/0:16,0:16:42.10:0,42,451	0/0:20,0:20:54.12:0,54,572	0/0:11,0:11:33.04:0,33,342	0/0:14,0:14:36.09:0,36,387	0/0:21,0:21:63.14:0,63,668	0/0:17,0:17:48.12:0,48,515	0/0:9,0:9:27.07:0,27,290
chr10	25984113	.	CT	C	181.38	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.557;DP=470;FS=2.808;HRun=7;HaplotypeScore=66.0991;InbreedingCoeff=0.9263;MQ=80.37;MQ0=1;MQRankSum=-0.432;QD=16.49;ReadPosRankSum=1.320;VQSLOD=3.7039;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:24:72.19:0,72,877	0/0:9,0:9:21.07:0,21,264	0/0:14,0:14:39.06:0,39,457	0/0:10,0:10:27.06:0,27,301	0/0:28,0:28:81.23:0,81,991	0/0:23,0:23:66.21:0,66,830	0/0:17,0:17:39.12:0,39,479	0/0:31,0:31:75.23:0,75,929	0/0:13,1:14:8.51:0,9,422	0/0:19,0:19:51.13:0,51,625	0/0:25,0:25:72.22:0,72,893	0/0:9,0:9:27.08:0,27,329	0/0:11,0:11:30.10:0,30,377	0/0:7,0:7:21.05:0,21,250	1/1:1,10:11:27.06:275,27,0	0/0:15,0:15:45.14:0,45,566	0/0:22,0:22:60.19:0,60,753	0/0:9,0:9:27.04:0,27,321	0/0:30,0:30:87.26:0,87,1070	0/0:26,0:26:66.20:0,66,818	0/0:15,0:15:45.14:0,45,566	0/0:11,0:11:30.10:0,30,377	0/0:20,0:20:57.18:0,57,717	0/0:10,0:10:30.10:0,30,377	0/0:14,0:14:42.13:0,42,518	0/0:16,0:16:48.15:0,48,604	0/0:18,0:18:51.16:0,51,640	0/0:10,0:11:26.92:0,27,317
chr10	25985864	.	AT	A	3903.98	PASS	AB=0.550;AC=48;AF=0.889;AN=54;BaseQRankSum=-2.667;DP=290;FS=27.688;HRun=12;HaplotypeScore=37.8868;InbreedingCoeff=0.4468;MQ=79.11;MQ0=10;MQRankSum=-2.384;QD=15.93;ReadPosRankSum=3.964;VQSLOD=2.3806;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,13:15:38.79:296,39,0	1/1:0,4:4:8.97:70,9,0	0/0:31,0:20:18.15:0,18,130	0/0:14,0:5:5.97:0,6,47	1/1:1,11:12:29.88:232,30,0	1/1:1,9:10:20.85:156,21,0	1/1:4,6:10:17.92:139,18,0	1/1:4,15:19:44.75:342,45,0	1/1:1,4:5:11.95:93,12,0	1/1:5,7:11:20.91:162,21,0	1/1:1,12:13:5.42:225,5,0	1/1:0,7:7:17.87:133,18,0	1/1:2,3:3:5.98:46,6,0	1/1:1,2:2:5.98:46,6,0	./.	1/1:3,5:9:16.97:122,17,0	1/1:5,15:20:15.38:273,15,0	1/1:3,10:11:29.88:232,30,0	1/1:4,3:7:8.88:63,9,0	1/1:1,8:10:23.90:186,24,0	0/1:1,3:4:21.05:37,0,21	1/1:2,2:3:5.98:46,6,0	1/1:6,6:11:19.90:135,20,0	1/1:5,3:7:11.32:78,11,0	0/1:1,8:9:3.54:159,0,4	1/1:2,13:15:11.38:271,11,0	1/1:1,12:13:35.81:273,36,0	1/1:1,4:5:11.91:88,12,0
chr10	25993716	.	AT	A	13740.23	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=4.909;DP=578;FS=0.425;HRun=6;HaplotypeScore=63.1996;InbreedingCoeff=0.9984;MQ=71.38;MQ0=0;MQRankSum=-3.119;QD=28.51;ReadPosRankSum=4.584;VQSLOD=5.2638;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,23:26:69.17:741,69,0	1/1:1,13:14:39.10:419,39,0	0/0:25,0:25:69.20:0,69,858	0/0:20,0:20:20.57:0,21,560	1/1:0,22:22:60.15:645,60,0	1/1:2,17:19:51.13:548,51,0	1/1:2,11:13:27.07:290,27,0	0/0:14,0:14:33.11:0,33,434	1/1:0,25:25:60.15:645,60,0	1/1:0,30:30:90.19:950,90,0	1/1:1,17:18:42.10:451,42,0	1/1:1,11:12:33.08:355,33,0	1/1:2,20:22:60.15:645,60,0	1/1:0,12:12:33.08:355,33,0	0/0:18,0:18:54.18:0,54,709	1/1:0,14:14:42.11:451,42,0	0/0:19,0:19:57.19:0,57,750	1/1:2,16:18:46.76:514,47,0	1/1:0,17:16:48.12:516,48,0	1/1:2,35:37:99:1064,99,0	1/1:0,11:11:30.08:322,30,0	1/1:2,18:20:42.10:451,42,0	1/1:0,28:27:69.17:742,69,0	1/1:1,17:18:51.13:548,51,0	1/1:1,23:24:69.17:742,69,0	1/1:1,28:29:84.20:895,84,0	1/1:2,31:33:87.22:935,87,0	1/1:2,18:20:48.12:516,48,0
chr10	25994814	.	TTCAATCAATCAA	T	918.37	PASS	AB=0.600;AC=3;AF=0.054;AN=56;BaseQRankSum=7.492;DP=569;FS=7.369;HRun=0;HaplotypeScore=204.0581;InbreedingCoeff=0.6201;MQ=68.99;MQ0=2;MQRankSum=-7.629;QD=21.36;ReadPosRankSum=1.250;VQSLOD=2.0495;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:10,15:25:39.06:993,39,0	0/0:14,0:14:24.08:0,24,1343	0/0:18,0:17:9.03:0,9,491	0/0:31,0:28:27.09:0,27,1141	0/0:27,0:26:72.25:0,72,3558	0/0:31,0:31:69.24:0,69,3577	0/0:14,0:13:27.09:0,27,1510	0/0:25,0:25:45.15:0,45,1954	0/0:24,0:24:48.16:0,48,2585	0/0:26,0:26:66.22:0,66,3490	0/0:21,0:21:51.18:0,51,2552	0/0:18,0:19:45.15:0,45,2531	0/0:17,0:18:45.15:0,45,2495	0/0:15,0:15:30.10:0,30,1609	0/1:6,0:18:17.24:31,0,17	0/0:9,0:9:18.06:0,18,706	0/0:15,0:15:28.32:0,28,1202	0/0:10,0:9:24.08:0,24,1128	0/0:12,0:11:18.06:0,18,942	0/0:31,0:31:69.24:0,69,3882	0/0:15,0:16:36.12:0,36,1900	0/0:20,0:20:45.13:0,45,2357	0/0:21,0:21:45.15:0,45,2222	0/0:21,0:21:39.13:0,39,1961	0/0:21,0:21:45.15:0,45,2570	0/0:19,0:19:39.13:0,39,2277	0/0:24,0:24:39.12:0,39,2107	0/0:24,0:24:57.20:0,57,3199
chr10	25996802	.	AT	A	5929.29	PASS	AB=1.000;AC=53;AF=0.946;AN=56;BaseQRankSum=-2.209;DP=362;FS=13.253;HRun=9;HaplotypeScore=130.4956;InbreedingCoeff=0.5600;MQ=59.20;MQ0=17;MQRankSum=-1.772;QD=18.59;ReadPosRankSum=3.378;VQSLOD=3.7881;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,20:22:51.91:463,52,0	1/1:1,2:3:6:54,6,0	0/1:46,0:7:9.54:10,0,39	0/0:43,0:17:12.70:0,13,173	1/1:4,10:14:27:241,27,0	1/1:2,11:13:33.02:298,33,0	1/1:2,4:6:12:108,12,0	1/1:4,8:12:15.75:203,16,0	1/1:1,6:7:18.01:162,18,0	1/1:2,11:13:33.01:299,33,0	1/1:0,14:14:42.02:379,42,0	1/1:2,6:8:20.88:176,21,0	1/1:0,4:4:12.01:108,12,0	1/1:2,5:7:15.01:135,15,0	1/1:3,7:10:24.01:219,24,0	1/1:1,6:7:18.01:163,18,0	1/1:2,8:10:23.93:205,24,0	1/1:2,10:12:29.87:258,30,0	1/1:6,16:20:44.90:395,45,0	1/1:2,10:12:30.01:270,30,0	1/1:2,2:4:12.01:108,12,0	1/1:1,8:9:24.01:216,24,0	1/1:3,11:13:33:293,33,0	1/1:1,9:9:27.01:243,27,0	1/1:1,7:8:18.01:162,18,0	1/1:2,9:10:27.01:244,27,0	1/1:0,12:12:36.02:325,36,0	1/1:2,7:8:21.48:192,21,0
chr10	25996812	.	CT	C	2864.64	PASS	AB=1.000;AC=49;AF=0.875;AN=56;BaseQRankSum=-1.545;DP=347;FS=13.166;HRun=13;HaplotypeScore=123.5759;InbreedingCoeff=0.6158;MQ=57.25;MQ0=19;MQRankSum=-2.560;QD=11.37;ReadPosRankSum=3.146;VQSLOD=1.8564;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,15:21:27.86:248,28,0	1/1:2,2:4:8.84:65,9,0	0/0:45,0:6:5.34:0,5,28	0/0:41,0:16:12.78:0,13,61	1/1:4,7:10:8.91:65,9,0	1/1:4,7:11:20.70:147,21,0	1/1:0,5:5:14.89:107,15,0	0/1:9,0:9:17.86:31,0,18	1/1:2,6:8:11.81:86,12,0	1/1:5,5:11:16.90:114,17,0	1/1:3,11:14:26.56:184,27,0	1/1:3,4:7:11.80:86,12,0	1/1:3,4:7:5.91:43,6,0	1/1:3,2:5:5.71:39,6,0	0/0:8,0:8:14.47:0,14,87	1/1:1,8:9:20.86:152,21,0	1/1:6,6:12:31.35:218,31,0	1/1:3,10:13:26.69:195,27,0	1/1:13,5:16:23.05:162,23,0	1/1:6,6:12:23.65:169,24,0	1/1:2,2:4:5.90:43,6,0	1/1:6,3:9:8.91:65,9,0	1/1:5,7:11:20.68:146,21,0	1/1:1,9:9:17.53:123,18,0	1/1:2,5:7:8.73:64,9,0	1/1:3,7:9:20.85:151,21,0	1/1:3,10:13:26.45:191,26,0	1/1:3,5:8:16.94:115,17,0
chr10	25997618	.	CCT	C	172.32	PASS	AC=10;AF=0.500;AN=20;BaseQRankSum=3.525;DP=95;FS=0.000;HRun=0;HaplotypeScore=26.7870;InbreedingCoeff=0.6643;MQ=147.39;MQ0=0;MQRankSum=-2.397;QD=17.23;ReadPosRankSum=2.119;VQSLOD=2.9036;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:13,0:13:39.12:0,39,670	0/0:19,0:19:51.17:0,51,965	./.	./.	1/1:0,1:1:3.01:46,3,0	0/0:23,0:23:66.23:0,66,1237	./.	./.	1/1:1,1:2:3.01:46,3,0	./.	./.	./.	0/0:3,0:3:9.03:0,9,173	./.	0/0:22,0:22:54.18:0,54,986	./.	./.	./.	1/1:1,2:2:3.01:46,3,0	./.	1/1:0,2:2:6.02:92,6,0	./.	./.	./.	./.	1/1:1,1:2:3.01:46,3,0
chr10	25997689	.	AT	A	245.20	PASS	AC=4;AF=0.50;AN=8;BaseQRankSum=-3.887;DP=122;FS=23.940;HRun=9;HaplotypeScore=114.8622;MQ=94.93;MQ0=12;MQRankSum=-1.013;QD=10.22;ReadPosRankSum=1.603;VQSLOD=0.9654;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:42,0:17:17.56:0,18,138	0/0:52,0:24:37.06:0,37,279	./.	./.	./.	1/1:5,9:13:24:219,24,0	./.	./.	./.	./.	./.	./.	./.	./.	1/1:3,7:9:12:110,12,0	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.
chr10	26001666	.	A	AG	14167.12	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-7.559;DP=464;FS=0.714;HRun=5;HaplotypeScore=42.1878;InbreedingCoeff=0.9764;MQ=80.76;MQ0=1;MQRankSum=-7.952;QD=33.89;ReadPosRankSum=5.773;VQSLOD=4.3031;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,38:42:99:1447,111,0	1/1:0,6:6:18.06:237,18,0	0/0:30,0:30:63.74:0,64,749	0/0:16,0:15:30.04:0,30,311	1/1:1,23:24:63.20:829,63,0	1/1:1,10:11:24.08:311,24,0	1/1:4,20:24:51.17:671,51,0	1/1:2,24:26:72.22:929,72,0	1/1:0,23:23:60.03:789,60,0	1/1:1,16:17:48.15:621,48,0	1/1:4,11:15:36.11:464,36,0	1/1:0,7:7:21.07:276,21,0	1/1:0,8:8:24.08:316,24,0	1/1:0,11:11:30.10:395,30,0	1/1:0,10:10:27.09:355,27,0	1/1:2,7:9:21.07:276,21,0	1/1:0,17:17:51.17:671,51,0	1/1:1,12:13:33.11:434,33,0	1/1:5,11:16:36.12:468,36,0	1/1:1,18:19:57.17:732,57,0	1/1:0,20:20:48.16:632,48,0	1/1:2,9:11:24.08:316,24,0	1/1:2,5:7:15.05:197,15,0	1/1:2,12:14:21.07:276,21,0	1/1:0,21:21:63.20:829,63,0	1/1:1,21:22:63.20:828,63,0	1/1:0,16:16:42.14:553,42,0	1/1:1,8:9:24.08:316,24,0
chr10	26002413	.	CCA	C	2435.31	PASS	AB=0.959;AC=37;AF=0.661;AN=56;BaseQRankSum=7.667;DP=444;FS=8.823;HRun=0;HaplotypeScore=82.1619;InbreedingCoeff=-0.2695;MQ=72.55;MQ0=10;MQRankSum=-1.809;QD=5.98;ReadPosRankSum=10.313;VQSLOD=0.4435;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:29,2:30:18.98:254,0,19	1/1:3,0:3:7.61:30,8,0	0/0:21,0:15:30.13:0,30,334	0/0:16,0:11:23.55:0,24,206	0/1:21,3:24:37.98:171,0,38	0/1:25,0:25:19.04:123,0,19	1/1:13,0:13:5.25:79,5,0	0/1:23,0:23:39.26:39,0,131	0/1:6,0:6:12.56:19,0,13	0/1:18,0:18:19.34:83,0,19	1/1:19,3:22:1.02:167,1,0	0/1:9,0:9:20.48:20,0,31	1/1:11,0:10:3.47:100,3,0	0/1:7,1:8:37.13:40,0,37	1/1:7,1:8:10.30:82,10,0	0/1:14,0:12:40.21:69,0,40	1/1:16,4:20:22.73:265,23,0	1/1:9,0:9:19.79:79,20,0	0/1:17,0:17:52.49:52,0,75	0/1:24,1:23:73.50:128,0,73	1/1:24,1:24:50.75:201,51,0	0/1:13,2:14:42.29:104,0,42	0/1:16,2:18:8:137,0,8	1/1:7,0:7:16.22:54,16,0	0/1:18,0:18:65.25:65,0,82	0/1:12,1:12:48.74:49,0,50	1/1:10,1:10:4.52:111,5,0	1/1:14,0:13:4.92:79,5,0
chr10	26002415	.	ACC	A	9301.62	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-6.400;DP=444;FS=2.098;HRun=11;HaplotypeScore=62.4286;InbreedingCoeff=0.8978;MQ=78.00;MQ0=10;MQRankSum=-2.095;QD=23.25;ReadPosRankSum=5.038;VQSLOD=4.4379;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,25:31:66.15:701,66,0	1/1:0,3:3:9.02:96,9,0	0/0:30,0:23:23.85:0,24,340	0/0:14,0:9:10.19:0,10,82	1/1:8,15:24:45.03:533,45,0	1/1:3,20:23:54.12:575,54,0	1/1:1,12:13:33.07:351,33,0	1/1:6,16:23:41.39:437,41,0	1/1:1,5:6:12.02:128,12,0	1/1:2,16:18:48.09:505,48,0	1/1:4,18:22:51.11:540,51,0	1/1:2,5:8:14.92:144,15,0	1/1:0,10:9:27.07:287,27,0	1/1:4,4:8:11.99:128,12,0	1/1:2,6:8:21.05:223,21,0	1/1:2,11:11:27.06:287,27,0	1/1:5,14:19:51.12:539,51,0	1/1:0,9:9:24.06:255,24,0	1/1:3,14:17:39:395,39,0	1/1:5,20:23:41.98:432,42,0	1/1:3,21:23:63.16:670,63,0	1/1:5,10:14:27.06:286,27,0	1/1:4,15:19:42.08:446,42,0	1/1:0,7:7:21.05:224,21,0	1/1:5,12:17:27.05:282,27,0	1/1:4,7:10:18:182,18,0	1/1:2,10:11:27.06:287,27,0	1/1:3,11:13:36.05:369,36,0
chr10	26002627	.	G	GA	255.76	PASS	AB=1.000;AC=4;AF=0.071;AN=56;BaseQRankSum=-4.134;DP=491;FS=0.000;HRun=0;HaplotypeScore=102.8984;InbreedingCoeff=0.4602;MQ=71.33;MQ0=5;MQRankSum=2.291;QD=5.01;ReadPosRankSum=0.134;VQSLOD=3.0970;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,1:37:34.94:0,35,253	0/0:7,0:7:12.03:0,12,78	0/0:27,0:19:14.02:0,14,151	0/0:38,0:23:36.80:0,37,345	0/0:18,0:18:13.95:0,14,151	0/0:17,0:16:26.21:0,26,152	0/0:20,0:20:34.92:0,35,244	0/0:13,0:13:9.15:0,9,130	0/1:11,0:11:0.68:1,0,48	0/1:17,0:17:4.78:5,0,71	0/0:13,0:13:30.90:0,31,214	0/0:13,0:13:20.15:0,20,118	0/0:15,0:15:23.05:0,23,140	0/0:14,0:14:21.79:0,22,146	1/1:7,16:23:37.35:349,37,0	0/0:11,0:11:22.54:0,23,133	0/0:24,0:23:43.78:0,44,263	0/0:6,0:6:8.79:0,9,53	0/0:8,0:8:15.78:0,16,108	0/0:29,0:29:58.71:0,59,385	0/0:17,0:17:23.58:0,24,167	0/0:11,0:11:11.73:0,12,54	0/0:13,0:13:24.91:0,25,163	0/0:36,0:33:56.62:0,57,342	0/0:10,0:10:5.80:0,6,32	0/0:18,0:18:20.98:0,21,205	0/0:14,0:13:21.94:0,22,131	0/0:11,0:11:19.89:0,20,160
chr10	26002628	.	G	GGGGA	11170.44	PASS	AB=0.583;AC=51;AF=0.911;AN=56;BaseQRankSum=-0.783;DP=520;FS=11.488;HRun=0;HaplotypeScore=94.3788;InbreedingCoeff=0.5459;MQ=70.49;MQ0=5;MQRankSum=-3.654;QD=24.66;ReadPosRankSum=4.654;VQSLOD=3.4405;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,3:40:48.12:879,48,0	1/1:2,0:7:8.92:127,9,0	0/0:29,0:21:7.10:0,7,185	0/0:38,0:22:17.97:0,18,339	1/1:3,0:21:21.25:448,21,0	1/1:1,0:17:27.09:495,27,0	1/1:6,1:23:19.47:597,19,0	1/1:3,1:17:41.94:527,42,0	1/1:1,0:12:15.05:273,15,0	0/1:4,1:14:3.42:226,0,3	1/1:2,0:14:29.83:384,30,0	1/1:2,0:13:21.02:371,21,0	1/1:3,1:16:21.07:403,21,0	1/1:4,1:15:0.19:401,0,0	1/1:3,0:20:18.86:267,19,0	1/1:1,0:11:24.08:441,24,0	1/1:2,0:24:41.81:735,42,0	1/1:1,1:7:9.03:178,9,0	1/1:5,0:12:25.90:257,26,0	1/1:9,0:30:35.08:922,35,0	1/1:3,0:20:5.32:321,5,0	1/1:2,0:12:8.96:131,9,0	1/1:1,0:15:5.35:312,5,0	1/1:6,2:35:54.10:976,54,0	1/1:1,1:10:6.02:99,6,0	1/1:2,2:18:18.24:601,18,0	1/1:3,1:13:27.09:539,27,0	1/1:3,0:11:15.94:258,16,0
chr10	26005425	.	AAC	A	19132.99	PASS	AB=0.578;AC=47;AF=0.839;AN=56;BaseQRankSum=9.953;DP=624;FS=2.727;HRun=0;HaplotypeScore=126.4334;InbreedingCoeff=0.8604;MQ=51.84;MQ0=36;MQRankSum=0.640;QD=38.73;ReadPosRankSum=3.427;VQSLOD=6.7302;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:84.17:0,84,1604	1/1:0,8:8:21.07:320,21,0	0/0:35,0:8:17.23:0,17,355	0/0:31,0:6:18.06:0,18,347	1/1:1,13:14:36.08:524,36,0	1/1:0,22:22:60.20:911,60,0	1/1:0,16:16:48.16:734,48,0	0/1:7,19:21:56.99:704,0,57	1/1:1,21:22:57.19:872,57,0	1/1:3,13:14:42.13:615,42,0	1/1:0,18:18:54.18:825,54,0	1/1:0,17:17:45.15:687,45,0	1/1:2,25:27:72.24:1088,72,0	1/1:0,23:23:63.21:963,63,0	0/0:33,0:33:99:0,99,1810	1/1:1,25:26:66.22:1005,66,0	1/1:4,23:25:45.15:676,45,0	1/1:1,30:31:20.63:1090,21,0	1/1:2,12:12:36.12:534,36,0	1/1:0,15:15:42.14:643,42,0	1/1:0,24:24:54.18:825,54,0	1/1:0,15:15:42.14:636,42,0	1/1:0,14:14:42.14:641,42,0	1/1:0,26:25:60.20:911,60,0	1/1:2,17:17:48.16:735,48,0	1/1:1,24:25:72.24:1101,72,0	1/1:2,37:38:99:1680,111,0	1/1:0,10:10:27.09:413,27,0
chr10	26005783	.	CTATATATATATATA	C	561.21	PASS	AB=0.955;AC=16;AF=0.615;AN=26;DP=182;FS=0.000;HRun=0;HaplotypeScore=84.2242;InbreedingCoeff=0.3096;MQ=57.04;MQ0=3;QD=7.38;VQSLOD=0.7752;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	0/0:8,0:4:0:0,0,0	0/1:4,0:4:0:0,0,0	0/1:9,1:9:0:0,0,0	./.	1/1:8,0:13:0.64:2,1,0	./.	0/0:5,0:5:0:0,0,0	1/1:10,0:10:3:26,3,0	./.	./.	1/1:5,0:5:3:25,3,0	1/1:11,0:19:3.01:98,3,0	./.	0/0:11,0:10:0.47:0,0,1	1/1:6,0:7:5.98:125,6,0	./.	./.	./.	./.	./.	./.	./.	1/1:2,0:4:6.02:208,6,0	0/0:3,0:2:0:0,0,0	1/1:3,0:3:6.02:146,6,0
chr10	26005879	.	A	ATTAATTCAATCGATTT	46154.07	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-0.630;DP=346;FS=51.330;HRun=0;HaplotypeScore=154.0227;InbreedingCoeff=0.9109;MQ=88.54;MQ0=1;MQRankSum=-12.531;QD=180.29;ReadPosRankSum=0.023;VQSLOD=3.2511;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:93.32:0,93,4303	1/1:3,3:7:18.06:1293,18,0	0/0:23,0:22:59.39:0,59,2082	0/0:17,0:17:51.16:0,51,1787	1/1:5,6:12:33.11:2419,33,0	1/1:1,2:6:9.03:558,9,0	1/1:8,2:11:27.09:1655,27,0	1/1:32,4:39:99:6888,111,0	1/1:5,5:10:30.10:2255,30,0	1/1:8,2:10:30.10:2089,30,0	1/1:13,3:16:41.87:2207,42,0	1/1:1,5:6:18.06:1232,18,0	1/1:3,7:10:30.10:2117,30,0	1/1:3,5:9:27.09:1880,27,0	0/0:17,0:17:42.14:0,42,1742	1/1:5,4:9:27.09:2023,27,0	1/1:10,7:17:39.13:2913,39,0	1/1:5,1:7:18.06:1312,18,0	1/1:4,3:7:21.07:1315,21,0	1/1:7,3:10:30.10:2297,30,0	1/1:2,1:3:3.01:238,3,0	1/1:6,5:11:30.10:1948,30,0	1/1:6,4:10:27.05:1612,27,0	1/1:5,1:6:8.67:385,9,0	1/1:4,2:6:18.06:1155,18,0	1/1:4,4:8:24.08:1814,24,0	1/1:9,5:14:42.07:2277,42,0	1/1:9,2:11:33.11:2272,33,0
chr10	26007582	.	GT	G	14655.58	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-5.903;DP=599;FS=6.128;HRun=7;HaplotypeScore=67.2168;InbreedingCoeff=0.9985;MQ=88.06;MQ0=0;MQRankSum=-10.515;QD=26.84;ReadPosRankSum=6.426;VQSLOD=4.9751;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:1,43:44:99:1163,114,0	1/1:1,12:13:36.08:367,36,0	0/0:25,0:25:57.17:0,57,690	0/0:28,0:27:63.15:0,63,743	1/1:0,28:28:81.18:826,81,0	1/1:2,27:29:75.17:765,75,0	1/1:0,14:14:39.09:398,39,0	1/1:4,21:25:63.13:636,63,0	1/1:2,20:22:54.12:551,54,0	1/1:2,23:25:72.11:718,72,0	1/1:0,10:10:27.06:275,27,0	1/1:1,22:23:63.14:643,63,0	1/1:1,14:15:42.10:428,42,0	1/1:1,13:14:36.08:367,36,0	1/1:0,18:18:54.12:551,54,0	1/1:1,16:17:42.10:428,42,0	1/1:0,15:15:45.10:459,45,0	1/1:1,18:19:51.12:520,51,0	1/1:5,19:24:57.10:573,57,0	1/1:3,26:29:78.18:796,78,0	1/1:3,23:26:66.15:673,66,0	1/1:2,16:18:48.10:489,48,0	1/1:2,21:23:63.14:643,63,0	1/1:2,16:18:45.10:459,45,0	1/1:2,12:14:30.07:306,30,0	1/1:7,22:29:66.15:673,66,0	1/1:2,22:24:66.15:673,66,0	1/1:1,9:10:27.06:275,27,0
chr10	26008552	.	C	CA	9460.71	PASS	AB=0.582;AC=49;AF=0.875;AN=56;BaseQRankSum=-5.311;DP=498;FS=0.846;HRun=11;HaplotypeScore=52.5038;InbreedingCoeff=0.4115;MQ=69.18;MQ0=2;MQRankSum=0.793;QD=19.83;ReadPosRankSum=0.918;VQSLOD=5.7923;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:5,10:15:3.20:187,0,3	1/1:1,6:7:18.04:183,18,0	0/0:16,0:10:11.64:0,12,82	0/0:5,0:4:2.78:0,3,13	1/1:5,16:21:4.48:385,4,0	1/1:2,13:15:9.83:281,10,0	1/1:1,7:8:15.03:152,15,0	1/1:10,20:30:54.05:525,54,0	1/1:2,12:15:30.06:304,30,0	1/1:1,17:18:45.07:449,45,0	1/1:5,23:30:59.78:570,60,0	1/1:2,10:12:30.06:305,30,0	1/1:3,14:18:15.84:342,16,0	0/1:1,8:10:5.37:117,0,5	1/1:2,7:9:12.02:122,12,0	1/1:2,11:14:32.90:319,33,0	1/1:4,24:28:63.13:640,63,0	1/1:7,9:16:27.05:274,27,0	0/1:10,16:26:52.85:423,0,53	1/1:3,21:24:60.04:589,60,0	1/1:3,12:16:29.89:288,30,0	1/1:4,18:22:45.09:457,45,0	1/1:5,19:25:56.95:562,57,0	1/1:1,5:6:12.91:124,13,0	1/1:3,14:18:29.89:288,30,0	1/1:2,14:17:21.83:395,22,0	1/1:5,28:35:41.90:625,42,0	1/1:2,20:22:36.89:555,37,0
chr10	26011284	.	G	GT	219.75	PASS	AB=0.909;AC=4;AF=0.071;AN=56;BaseQRankSum=-0.133;DP=352;FS=8.808;HRun=8;HaplotypeScore=51.3453;InbreedingCoeff=0.4417;MQ=72.45;MQ0=2;MQRankSum=-0.675;QD=5.11;ReadPosRankSum=0.979;VQSLOD=-0.1240;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:60.01:0,60,542	0/0:1,0:1:3:0,3,27	0/0:17,1:12:25.90:0,26,210	0/1:18,2:15:1.36:1,0,95	0/0:16,0:16:36.01:0,36,329	0/0:12,0:12:36.02:0,36,329	0/0:12,0:12:33.02:0,33,302	0/0:24,0:24:66.03:0,66,604	0/0:13,0:13:33.02:0,33,302	0/0:13,0:13:30.01:0,30,275	0/0:13,0:13:29.88:0,30,274	0/0:9,0:9:18.01:0,18,165	0/0:7,0:7:15:0,15,137	0/0:9,0:9:21:0,21,188	1/1:3,10:13:27.08:312,27,0	0/0:13,0:13:18:0,18,165	0/0:20,0:20:47.99:0,48,439	0/0:13,0:12:27.01:0,27,247	0/0:18,0:19:47.06:0,47,418	0/0:10,0:10:24.01:0,24,220	0/0:12,0:12:36:0,36,322	0/0:7,0:7:12:0,12,110	0/0:3,0:3:9:0,9,82	0/0:12,0:12:30.02:0,30,274	0/0:5,0:5:8.84:0,9,82	0/0:15,0:15:39.01:0,39,353	0/1:9,1:10:7.64:8,0,193	0/0:10,0:10:24.01:0,24,220
chr10	26011306	.	T	TTGTGTGTG	4949.02	PASS	AB=1.000;AC=49;AF=0.942;AN=52;BaseQRankSum=-1.203;DP=389;FS=0.000;HRun=0;HaplotypeScore=117.1428;InbreedingCoeff=0.0762;MQ=57.75;MQ0=21;MQRankSum=-0.176;QD=15.32;ReadPosRankSum=0.230;VQSLOD=3.3774;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:21:2.99:0,3,24	1/1:2,0:2:3.01:84,3,0	./.	./.	1/1:11,0:11:3.01:110,3,0	1/1:12,0:12:9.03:244,9,0	1/1:19,0:18:8.13:230,8,0	1/1:25,0:25:9.49:109,9,0	1/1:14,0:14:8.82:226,9,0	1/1:12,0:11:12.04:350,12,0	1/1:10,0:10:6.02:164,6,0	1/1:11,0:10:3.01:95,3,0	1/1:10,0:10:11.25:272,11,0	1/1:10,0:9:6:96,6,0	1/1:14,2:15:16.87:385,17,0	1/1:6,0:7:3.01:104,3,0	1/1:21,0:20:21.04:459,21,0	1/1:12,3:14:8.24:193,8,0	1/1:21,0:20:9.03:203,9,0	1/1:8,0:12:9.03:236,9,0	0/1:17,0:15:24.76:249,0,25	1/1:6,0:3:3.01:76,3,0	1/1:5,0:4:3.01:76,3,0	1/1:23,0:23:6:73,6,0	1/1:6,0:6:3.01:112,3,0	1/1:17,0:17:15.52:311,16,0	1/1:10,0:9:9.03:245,9,0	1/1:9,0:6:11.83:245,12,0
chr10	26012206	.	TCACACACA	T	2310.55	PASS	AB=0.881;AC=31;AF=0.620;AN=50;BaseQRankSum=-0.379;DP=453;FS=22.171;HRun=0;HaplotypeScore=124.5776;InbreedingCoeff=0.1613;MQ=57.25;MQ0=18;MQRankSum=-0.614;QD=7.24;ReadPosRankSum=-0.240;VQSLOD=1.0236;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:20:20.91:0,21,379	1/1:2,0:5:3.01:56,3,0	0/0:27,0:14:6.02:0,6,86	0/0:28,0:16:3.01:0,3,39	0/0:4,8:12:0:0,0,0	0/1:13,0:15:23.54:140,0,24	1/1:10,6:16:3.01:73,3,0	1/1:20,0:19:12.04:180,12,0	1/1:11,10:21:6.02:111,6,0	1/1:7,3:9:12.01:175,12,0	0/0:4,2:6:3.01:0,3,46	1/1:12,6:17:11.92:155,12,0	1/1:8,9:15:11.72:200,12,0	0/1:17,8:25:36.71:37,0,41	./.	1/1:2,8:10:3.01:75,3,0	0/1:16,1:17:60.53:186,0,61	0/1:8,6:14:47.21:66,0,47	0/1:16,1:18:31.95:278,0,32	1/1:7,0:6:6.02:110,6,0	0/1:51,0:48:19.95:181,0,20	./.	0/0:11,4:14:3.01:0,3,43	1/1:10,8:19:0.27:1,0,0	0/1:8,0:7:0:0,0,0	1/1:11,4:15:11.24:207,11,0	./.	1/1:10,2:12:11.97:226,12,0
chr10	26012312	.	GCACA	G	175	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.809;DP=598;FS=1.805;HRun=0;HaplotypeScore=100.0718;InbreedingCoeff=0.9551;MQ=54.21;MQ0=9;MQRankSum=0.129;QD=9.21;ReadPosRankSum=-1.826;VQSLOD=1.9256;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:66.53:0,67,1595	0/0:5,0:5:15.05:0,15,385	0/0:49,0:13:27.90:0,28,531	0/0:48,0:12:24.50:0,24,495	0/0:13,0:13:39.12:0,39,935	0/0:19,0:19:54.19:0,54,1385	0/0:13,0:13:24.08:0,24,589	0/0:22,0:22:54.16:0,54,1263	0/0:13,0:13:35.91:0,36,856	0/0:16,0:15:38.62:0,39,900	0/0:8,0:8:24.08:0,24,616	0/0:14,0:13:27.09:0,27,683	0/0:15,0:15:30.09:0,30,689	0/0:18,0:18:51.10:0,51,1230	1/1:2,17:19:15.04:263,15,0	0/0:9,0:9:21.07:0,21,539	0/0:25,0:25:57.18:0,57,1361	0/0:26,0:27:69:0,69,1599	0/0:22,0:22:50.95:0,51,1182	0/0:8,0:9:26.88:0,27,628	0/0:84,0:82:99:0,190,4605	0/0:13,0:13:36.11:0,36,857	0/0:16,0:15:38.04:0,38,995	0/0:28,0:28:51.07:0,51,1274	0/0:18,0:18:44.74:0,45,1088	0/0:12,0:12:36.10:0,36,816	0/0:13,0:13:39.13:0,39,990	0/0:17,0:17:48.16:0,48,1210
chr10	26012840	.	T	TACTC	43840.33	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-9.146;DP=656;FS=1.920;HRun=0;HaplotypeScore=87.9904;InbreedingCoeff=0.9974;MQ=86.06;MQ0=0;MQRankSum=-11.160;QD=72.34;ReadPosRankSum=6.362;VQSLOD=6.5100;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,19:20:57.20:1532,57,0	1/1:1,11:12:30.10:821,30,0	0/0:26,0:26:72.20:0,72,1246	0/0:24,0:24:60.17:0,60,1054	1/1:6,19:27:66.23:1794,66,0	1/1:7,23:30:81.28:2165,81,0	1/1:2,20:23:57.20:1554,57,0	1/1:16,26:44:99:3216,132,0	1/1:1,25:29:81.28:2196,81,0	1/1:1,17:20:60.18:1494,60,0	1/1:3,10:15:39.13:1038,39,0	1/1:2,25:28:81.28:2196,81,0	1/1:4,29:36:93.32:2529,93,0	1/1:2,21:24:69.24:1867,69,0	1/1:4,15:19:51.17:1384,51,0	1/1:1,18:19:57.20:1546,57,0	1/1:1,14:15:42.14:1103,42,0	1/1:2,7:9:21.07:570,21,0	1/1:5,15:21:63.15:1601,63,0	1/1:7,23:32:84.29:2247,84,0	1/1:4,25:30:72.25:1970,72,0	1/1:7,17:24:57.18:1498,57,0	1/1:3,12:16:41.31:1129,41,0	1/1:0,18:19:51.17:1322,51,0	1/1:4,21:26:66.23:1783,66,0	1/1:1,24:26:78.17:1977,78,0	1/1:3,26:30:90.31:2453,90,0	1/1:3,8:11:33.11:854,33,0
chr10	26012841	.	A	ACTCC	32290.90	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=0.638;DP=646;FS=3.418;HRun=0;HaplotypeScore=126.8244;InbreedingCoeff=0.9974;MQ=86.81;MQ0=0;MQRankSum=-10.874;QD=54.27;ReadPosRankSum=7.411;VQSLOD=5.3273;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:19:57.19:1111,57,0	1/1:11,0:11:30.10:582,30,0	0/0:28,0:28:72.22:0,72,1334	0/0:23,0:23:63.17:0,63,1140	1/1:23,4:27:66.23:1396,66,0	1/1:30,1:31:81.28:1605,81,0	1/1:22,0:22:57.20:1185,57,0	1/1:45,0:44:99:2304,117,0	1/1:28,0:28:81.28:1642,81,0	1/1:19,0:19:55.06:995,55,0	1/1:14,0:14:39.13:794,39,0	1/1:26,2:28:81.28:1685,81,0	1/1:34,2:36:96.33:1992,96,0	1/1:24,0:24:69.24:1394,69,0	1/1:18,0:18:51.17:1002,51,0	1/1:20,0:20:57.20:1101,57,0	1/1:14,0:14:42.06:804,42,0	1/1:9,0:9:21.07:403,21,0	1/1:19,1:20:57.19:1124,57,0	1/1:27,4:31:84.29:1727,84,0	1/1:30,0:30:50.26:1401,50,0	1/1:24,1:25:34.80:1120,35,0	1/1:15,1:16:41.31:860,41,0	1/1:19,0:19:51.11:957,51,0	1/1:23,2:25:66.23:1339,66,0	1/1:23,0:23:69.24:1314,69,0	1/1:28,2:30:90.31:1829,90,0	1/1:11,0:11:33.11:624,33,0
chr10	26014746	.	TCTCTCA	T	2710.50	PASS	AB=0.981;AC=34;AF=0.654;AN=52;BaseQRankSum=-0.923;DP=436;FS=4.258;HRun=0;HaplotypeScore=96.3066;InbreedingCoeff=-0.3775;MQ=48.29;MQ0=22;MQRankSum=2.845;QD=6.58;ReadPosRankSum=0.326;VQSLOD=1.8154;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:23:15.27:15,0,139	0/1:13,0:13:52.22:52,0,79	0/1:11,0:5:6.53:7,0,22	./.	1/1:19,0:19:6.79:181,7,0	0/1:17,0:16:23.72:128,0,24	1/1:25,0:19:28.80:252,29,0	0/0:16,0:15:23.99:0,24,213	0/1:16,0:15:49.66:50,0,97	1/1:15,0:13:26.74:221,27,0	0/1:19,0:19:99:147,0,102	0/1:16,0:16:90.60:106,0,91	0/1:18,0:16:55.93:56,0,219	0/1:14,0:14:18.74:72,0,19	1/1:12,0:10:17.25:172,17,0	0/1:10,0:10:39.70:106,0,40	0/1:21,0:18:90.20:218,0,90	0/1:13,0:11:90.09:90,0,127	./.	1/1:13,0:13:0.35:141,0,0	1/1:9,0:9:2.98:22,3,0	1/1:19,0:19:5.71:64,6,0	0/1:9,7:16:3.86:4,0,11	0/1:31,0:29:50.84:185,0,51	1/1:15,0:14:8.22:120,8,0	0/1:14,0:13:99:136,0,132	0/1:27,0:25:33.84:249,0,34	1/1:5,0:5:8.38:70,8,0
chr10	26014750	.	TCACA	T	874.55	PASS	AB=1.000;AC=21;AF=0.389;AN=54;BaseQRankSum=-1.428;DP=454;FS=10.197;HRun=0;HaplotypeScore=98.1813;InbreedingCoeff=0.1776;MQ=48.25;MQ0=22;MQRankSum=3.003;QD=3.20;ReadPosRankSum=1.044;VQSLOD=1.3359;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:18.04:0,18,270	0/0:14,0:14:13.83:0,14,175	0/0:13,0:6:8.24:0,8,112	./.	0/1:20,0:20:39.41:79,0,39	0/1:19,0:18:33.82:34,0,90	1/1:26,0:20:7.43:62,7,0	0/0:16,0:15:27.05:0,27,446	0/0:15,0:14:3:0,3,62	0/1:17,0:15:36.28:37,0,36	0/1:19,0:19:16.40:16,0,101	0/0:16,0:16:4.87:0,5,20	0/0:15,0:14:0.34:0,0,4	0/1:15,0:15:29.47:29,0,45	1/1:12,0:10:9.03:114,9,0	0/1:10,0:10:0.69:1,0,1	0/0:20,0:18:32.97:0,33,398	1/1:12,0:10:0.59:2,1,0	0/0:5,0:4:3.43:0,3,20	0/1:15,0:15:8.93:86,0,9	0/0:11,0:11:0:0,0,1	0/0:10,0:18:3.37:0,3,9	0/1:17,0:16:0.30:1,0,0	1/1:33,0:30:3.92:35,4,0	1/1:15,0:14:12.72:138,13,0	1/1:6,8:13:24.08:363,24,0	0/1:29,0:28:13.50:30,0,13	0/0:5,0:5:4.53:0,5,20
chr10	26014884	.	C	CG	14243.63	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-10.980;DP=519;FS=6.031;HRun=3;HaplotypeScore=55.0151;InbreedingCoeff=0.9799;MQ=66.84;MQ0=1;MQRankSum=0.354;QD=32.59;ReadPosRankSum=1.859;VQSLOD=5.1133;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,126,1460	1/1:0,14:14:36.12:501,36,0	0/0:15,0:15:35.74:0,36,349	0/0:9,0:6:15:0,15,157	1/1:2,14:16:38.94:476,39,0	1/1:2,14:16:31.38:457,31,0	1/1:2,11:13:27.09:377,27,0	1/1:2,24:26:72.19:932,72,0	1/1:0,9:9:12.04:167,12,0	1/1:3,18:21:54.11:669,54,0	1/1:2,20:22:48.75:703,49,0	1/1:2,12:14:39.10:526,39,0	1/1:0,19:19:50.97:705,51,0	1/1:1,14:15:42.14:569,42,0	0/0:14,0:14:35.60:0,36,240	1/1:1,12:13:19.62:444,20,0	1/1:2,22:24:54.18:744,54,0	1/1:0,20:20:51.09:671,51,0	1/1:2,16:18:45.14:612,45,0	1/1:0,21:21:59.88:771,60,0	1/1:2,21:22:39.13:545,39,0	1/1:1,18:19:48.01:621,48,0	1/1:1,11:12:24.08:333,24,0	1/1:0,25:25:69.23:964,69,0	1/1:1,11:12:24.08:334,24,0	1/1:1,25:26:72.13:928,72,0	1/1:1,21:22:54.17:753,54,0	1/1:2,15:17:15.59:440,16,0
chr10	26014887	.	GA	G	200.95	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-3.947;DP=510;FS=0.000;HRun=8;HaplotypeScore=100.9839;InbreedingCoeff=0.9353;MQ=66.03;MQ0=1;MQRankSum=-0.976;QD=15.46;ReadPosRankSum=0.589;VQSLOD=3.4366;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,129,1521	0/0:14,0:14:35.23:0,35,218	0/0:11,1:13:26.87:0,27,298	0/0:9,0:6:12.03:0,12,132	0/0:13,0:14:35.30:0,35,220	0/0:15,0:15:35.40:0,35,222	0/0:11,0:11:29.60:0,30,194	0/0:31,0:31:89.06:0,89,660	0/0:9,0:9:11.82:0,12,75	0/0:19,0:19:41.44:0,41,282	0/0:22,0:22:59.98:0,60,382	0/0:15,0:15:41.36:0,41,272	0/0:19,0:19:49.97:0,50,316	0/0:14,0:15:41.27:0,41,261	1/1:1,11:13:32.08:296,32,0	0/0:14,0:14:38.48:0,38,267	0/0:23,0:23:56.12:0,56,360	0/0:19,0:19:50.22:0,50,318	0/0:16,0:16:44.39:0,44,301	0/0:20,0:20:46.97:0,47,287	0/0:19,0:18:38.43:0,38,245	0/0:21,0:21:50.38:0,50,351	0/0:12,0:12:26.66:0,27,177	0/0:25,0:25:67.99:0,68,433	0/0:11,0:11:23.63:0,24,150	0/0:26,0:26:71.06:0,71,489	0/0:22,0:22:56.18:0,56,363	0/0:16,0:16:35.52:0,36,233
chr10	26015308	.	AC	A	14441.31	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=1.154;DP=430;FS=67.647;HRun=2;HaplotypeScore=93.2325;InbreedingCoeff=0.9897;MQ=66.44;MQ0=0;MQRankSum=-7.227;QD=35.83;ReadPosRankSum=5.859;VQSLOD=-0.4891;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,19:20:51.17:661,51,0	1/1:2,5:7:18.04:219,18,0	0/0:11,0:11:27.75:0,28,412	0/0:16,0:16:41.70:0,42,514	1/1:0,14:14:42.14:544,42,0	1/1:2,14:15:42.12:531,42,0	1/1:0,12:12:36.12:467,36,0	1/1:0,24:24:69.22:895,69,0	1/1:1,13:13:36.12:467,36,0	1/1:1,18:19:57.19:739,57,0	1/1:0,12:12:33.11:428,33,0	1/1:0,12:12:36.12:467,36,0	1/1:0,10:10:24.08:311,24,0	1/1:1,25:25:69.19:863,69,0	1/1:0,13:13:39.13:506,39,0	1/1:1,14:15:45.15:583,45,0	1/1:3,17:20:60.19:776,60,0	1/1:2,7:9:24.08:311,24,0	1/1:1,20:21:60.19:778,60,0	1/1:2,21:23:60.19:776,60,0	1/1:1,9:10:24.08:311,24,0	1/1:1,22:23:69.21:881,69,0	1/1:0,17:17:45.15:583,45,0	1/1:0,10:10:24.04:292,24,0	1/1:0,8:8:24.08:311,24,0	1/1:1,14:15:42.12:531,42,0	1/1:0,20:19:57.14:720,57,0	1/1:1,12:13:39.11:491,39,0
chr10	26015336	.	T	TC	10460.13	PASS	AB=0.700;AC=51;AF=0.911;AN=56;BaseQRankSum=-1.483;DP=382;FS=54.429;HRun=0;HaplotypeScore=102.9574;InbreedingCoeff=0.7366;MQ=52.95;MQ0=3;MQRankSum=-2.361;QD=29.14;ReadPosRankSum=3.451;VQSLOD=1.0610;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,14:17:47.23:508,47,0	1/1:2,2:4:9.90:98,10,0	0/0:12,0:9:14.23:0,14,197	0/0:11,0:6:8.02:0,8,121	1/1:3,12:15:41.84:416,42,0	1/1:1,13:13:36.09:413,36,0	1/1:5,6:10:27.93:291,28,0	1/1:11,6:16:48.08:499,48,0	1/1:5,6:10:25.81:270,26,0	1/1:4,17:19:57.16:673,57,0	1/1:4,8:12:31.64:346,32,0	1/1:3,8:11:28.28:288,28,0	0/1:4,2:7:8.13:78,0,8	1/1:6,15:20:57.12:631,57,0	1/1:5,7:12:36.06:389,36,0	1/1:1,12:13:39.11:450,39,0	1/1:6,14:20:57.46:570,57,0	1/1:1,7:8:24.04:275,24,0	1/1:5,10:15:42.07:466,42,0	1/1:4,15:19:47.13:544,47,0	1/1:1,10:11:30.08:356,30,0	1/1:5,14:19:53.29:585,53,0	1/1:1,13:14:42.11:478,42,0	1/1:3,10:12:21.95:248,22,0	1/1:0,8:8:24.07:281,24,0	1/1:1,7:8:24.07:281,24,0	1/1:8,11:17:47.26:495,47,0	1/1:5,14:17:48.98:532,49,0
chr10	26015653	.	G	GTTGGCA	7002.74	PASS	AB=0.974;AC=40;AF=0.952;AN=42;BaseQRankSum=1.590;DP=793;FS=0.000;HRun=0;HaplotypeScore=47.7997;InbreedingCoeff=0.1011;MQ=14.63;MQ0=416;MQRankSum=-1.020;QD=12.78;ReadPosRankSum=0.261;VQSLOD=2.6480;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:72,9:6:6.02:162,6,0	1/1:6,4:7:3.01:102,3,0	./.	./.	1/1:12,7:14:9.03:308,9,0	1/1:7,10:9:9.03:298,9,0	1/1:34,2:2:6.02:157,6,0	./.	1/1:12,8:5:2.22:7,2,0	1/1:17,12:12:27.09:924,27,0	1/1:12,8:11:15.05:513,15,0	1/1:12,6:8:9.50:307,10,0	1/1:16,8:10:12.04:410,12,0	./.	1/1:9,10:9:9.03:253,9,0	1/1:12,11:9:12.04:411,12,0	./.	0/1:51,3:5:60.93:97,0,61	0/1:22,0:2:0:0,0,0	1/1:10,8:9:6.02:204,6,0	./.	1/1:13,10:14:15.05:508,15,0	1/1:11,7:9:12.04:406,12,0	./.	1/1:8,8:7:12.04:408,12,0	1/1:15,10:8:18.06:542,18,0	1/1:12,15:16:24.08:780,24,0	1/1:16,8:5:6.02:205,6,0
chr10	26016777	.	AT	A	12151.59	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=7.645;DP=563;FS=2.316;HRun=7;HaplotypeScore=80.6805;InbreedingCoeff=0.9986;MQ=80.30;MQ0=0;MQRankSum=-5.725;QD=27.43;ReadPosRankSum=4.032;VQSLOD=5.5093;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,21:23:60.13:611,60,0	1/1:1,8:9:27.06:275,27,0	0/0:22,0:22:54.06:0,54,647	0/0:12,0:12:30.07:0,30,362	1/1:4,30:34:93.19:941,93,0	1/1:3,25:28:40.44:727,40,0	1/1:1,24:25:63.14:643,63,0	0/0:33,0:33:90.27:0,90,1110	1/1:3,18:21:63.12:635,63,0	1/1:3,21:24:63.14:642,63,0	1/1:2,16:18:48.10:490,48,0	1/1:1,14:15:45.09:452,45,0	1/1:1,21:22:60.14:612,60,0	1/1:0,16:16:48.11:490,48,0	0/0:23,0:23:63.19:0,63,780	1/1:2,13:15:42.08:422,42,0	0/0:30,0:30:81.26:0,81,1019	1/1:1,7:8:24.05:245,24,0	1/1:7,15:22:48.10:489,48,0	1/1:4,25:29:84.16:843,84,0	1/1:3,11:13:36.06:359,36,0	1/1:4,17:21:60.11:603,60,0	1/1:1,20:21:60.14:612,60,0	1/1:3,7:10:27:256,27,0	1/1:2,12:14:39.09:398,39,0	1/1:4,19:23:66.15:673,66,0	1/1:3,16:19:45.10:459,45,0	1/1:3,9:12:27.06:275,27,0
chr10	26016823	.	CT	C	12354.62	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=6.996;DP=581;FS=1.220;HRun=6;HaplotypeScore=86.3970;InbreedingCoeff=0.9885;MQ=84.80;MQ0=0;MQRankSum=-8.881;QD=27.89;ReadPosRankSum=4.540;VQSLOD=5.2161;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,25:29:66.16:706,66,0	1/1:1,7:8:24.06:258,24,0	0/0:25,0:25:60.10:0,60,721	0/0:17,0:17:48.06:0,48,542	1/1:3,29:32:78.19:838,78,0	1/1:3,26:29:72.18:773,72,0	1/1:3,16:19:48.12:516,48,0	0/0:45,0:45:99:0,126,1622	1/1:3,22:25:66.15:701,66,0	1/1:2,26:28:81.20:862,81,0	1/1:1,20:21:54.13:580,54,0	1/1:2,11:13:33.08:355,33,0	1/1:1,13:14:36.09:387,36,0	1/1:1,12:13:36.09:387,36,0	0/0:24,0:24:66.21:0,66,868	1/1:1,15:16:45.10:475,45,0	0/0:27,0:27:72.23:0,72,947	1/1:2,6:8:15.04:161,15,0	1/1:1,15:16:45.11:484,45,0	1/1:2,21:23:63.16:677,63,0	1/1:4,15:19:38.68:411,39,0	1/1:3,25:28:78.19:838,78,0	1/1:1,14:15:45.07:471,45,0	1/1:0,12:12:30.08:322,30,0	1/1:0,23:23:63.16:677,63,0	1/1:1,20:21:63.15:671,63,0	1/1:3,23:26:63.16:676,63,0	1/1:1,4:5:12.03:129,12,0
chr10	26017332	.	AACACAC	A	2887.90	PASS	AB=1.000;AC=43;AF=0.860;AN=50;BaseQRankSum=5.107;DP=427;FS=8.045;HRun=0;HaplotypeScore=194.9372;InbreedingCoeff=0.4633;MQ=50.04;MQ0=19;MQRankSum=-3.415;QD=8.94;ReadPosRankSum=4.151;VQSLOD=1.5007;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:20:3.01:42,3,0	1/1:9,0:9:12.04:167,12,0	./.	0/0:26,0:9:0:0,0,0	1/1:23,0:22:21.19:147,21,0	1/1:20,0:20:9.03:126,9,0	1/1:9,0:8:3.01:40,3,0	0/0:21,0:21:10.27:0,10,109	1/1:20,0:20:27.09:377,27,0	1/1:16,0:15:9.03:126,9,0	1/1:18,0:18:9.39:101,9,0	0/1:6,0:6:16.26:16,0,36	1/1:10,0:10:9.03:126,9,0	1/1:10,0:10:12.04:168,12,0	1/1:8,6:14:12.04:230,12,0	1/1:13,0:13:12.04:167,12,0	0/0:15,0:14:15.05:0,15,394	1/1:13,0:11:6.02:84,6,0	1/1:16,0:16:9.03:126,9,0	1/1:23,0:22:15.67:178,16,0	./.	1/1:8,0:8:10.58:130,11,0	1/1:21,0:21:12.98:116,13,0	./.	1/1:13,0:13:10.85:131,11,0	1/1:12,0:12:6.02:84,6,0	1/1:17,0:16:15.05:209,15,0	1/1:11,0:11:9.03:126,9,0
chr10	26017337	.	ACACACACACACACACACACAC	A	11449.25	PASS	AB=0.788;AC=22;AF=0.393;AN=56;BaseQRankSum=12.795;DP=405;FS=0.000;HRun=0;HaplotypeScore=261.2369;InbreedingCoeff=-0.6600;MQ=47.55;MQ0=19;MQRankSum=-8.445;QD=38.68;ReadPosRankSum=9.382;VQSLOD=2.6090;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:18,2:19:99:212,0,191	0/1:5,3:9:36.90:565,0,37	0/0:15,0:3:9.03:0,9,114	0/0:26,0:9:21.45:0,21,247	0/1:11,10:21:51.53:1125,0,52	0/1:12,3:15:99:419,0,144	0/1:8,0:8:99:114,0,100	0/0:24,0:24:72.13:0,72,2822	0/1:11,9:20:94.32:1312,0,94	0/1:11,3:13:99:419,0,140	0/1:13,4:17:99:485,0,174	0/1:5,1:6:99:116,0,269	0/1:6,3:9:33.08:439,0,33	0/1:6,3:10:54.22:569,0,54	0/0:14,0:14:33.11:0,33,1079	0/1:7,4:11:82.52:580,0,83	0/0:17,0:16:36.57:0,37,2144	0/1:10,2:10:99:282,0,209	0/1:10,3:13:99:448,0,139	0/1:14,6:20:99:948,0,110	0/1:10,0:8:16.45:16,0,21	0/1:4,4:8:18:552,0,18	0/1:14,6:21:99:762,0,146	0/0:12,1:12:5.57:0,6,31	0/1:7,4:11:78.09:541,0,78	0/1:9,2:11:99:335,0,118	0/1:11,5:15:91.68:785,0,92	0/1:8,3:11:99:427,0,107
chr10	26018200	.	CA	C	1974.95	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.056;DP=670;FS=6.024;HRun=1;HaplotypeScore=69.9144;InbreedingCoeff=0.9981;MQ=83.41;MQ0=0;MQRankSum=-1.946;QD=37.98;ReadPosRankSum=-0.575;VQSLOD=3.8362;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,102,1603	0/0:15,0:15:42.14:0,42,671	0/0:26,0:26:59.74:0,60,1087	0/0:15,0:15:30.37:0,30,554	0/0:17,0:17:51.17:0,51,815	0/0:15,0:15:39.12:0,39,600	0/0:25,0:25:75.24:0,75,1175	1/1:0,24:24:69.23:964,69,0	0/0:33,0:33:96.31:0,96,1509	0/0:34,0:34:99:0,102,1630	0/0:20,0:20:60.20:0,60,959	0/0:24,0:24:72.25:0,72,1151	0/0:36,0:36:99:0,105,1652	0/0:28,0:28:84.27:0,84,1319	0/0:22,0:22:66.21:0,66,1031	0/0:18,0:18:54.18:0,54,863	1/1:0,28:28:81.27:1133,81,0	0/0:9,0:9:27.09:0,27,431	0/0:22,0:22:66.20:0,66,1008	0/0:29,0:29:84.27:0,84,1319	0/0:49,0:49:99:0,138,2206	0/0:30,0:30:90.29:0,90,1413	0/0:13,0:13:39.13:0,39,615	0/0:23,0:23:69.17:0,69,1047	0/0:20,0:20:60.18:0,60,914	0/0:22,0:22:66.21:0,66,1034	0/0:31,0:31:93.30:0,93,1462	0/0:8,0:8:24.08:0,24,384
chr10	26018710	.	TG	T	1488.32	PASS	AB=0.933;AC=5;AF=0.089;AN=56;BaseQRankSum=-5.165;DP=642;FS=1.116;HRun=2;HaplotypeScore=131.4278;InbreedingCoeff=0.8398;MQ=77.25;MQ0=0;MQRankSum=0.683;QD=21.89;ReadPosRankSum=-2.928;VQSLOD=2.7827;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:78:0,78,711	0/0:10,0:10:26.85:0,27,231	0/0:30,0:25:11.64:0,12,522	0/0:17,0:16:19.05:0,19,184	0/0:22,0:22:66.03:0,66,595	0/0:26,0:26:66.04:0,66,619	0/0:13,0:13:33.03:0,33,318	1/1:3,23:26:72:718,72,0	0/0:23,0:23:63.01:0,63,565	0/0:34,0:34:95.58:0,96,859	0/0:26,0:26:77.81:0,78,684	0/0:15,0:15:36.02:0,36,341	0/0:26,0:26:75:0,75,673	0/0:15,0:15:32.99:0,33,291	0/0:18,0:18:48.07:0,48,623	0/0:20,0:20:57.03:0,57,518	1/1:0,28:28:69.22:891,69,0	0/1:13,1:14:1.35:1,0,326	0/0:14,0:14:34.33:0,34,319	0/0:35,0:35:99:0,105,955	0/0:9,0:9:14.99:0,15,130	0/0:25,0:25:74.92:0,75,675	0/0:32,0:32:86.95:0,87,783	0/0:22,0:22:63.02:0,63,582	0/0:19,0:19:42.02:0,42,381	0/0:31,0:31:92.92:0,93,825	0/0:42,0:42:99:0,108,997	0/0:16,0:16:35.98:0,36,313
chr10	26018712	.	G	GT	13268.71	PASS	AB=0.636;AC=45;AF=0.804;AN=56;BaseQRankSum=-10.189;DP=644;FS=0.982;HRun=9;HaplotypeScore=92.1218;InbreedingCoeff=0.8608;MQ=76.02;MQ0=0;MQRankSum=-1.388;QD=24.99;ReadPosRankSum=3.299;VQSLOD=5.1186;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,31:35:52.18:793,52,0	1/1:0,10:10:27.07:293,27,0	0/0:27,0:23:19.66:0,20,253	0/0:15,0:14:5.64:0,6,63	1/1:2,20:22:60.16:664,60,0	1/1:1,24:26:63:678,63,0	1/1:1,13:14:30.08:332,30,0	0/0:24,0:24:28.16:0,28,113	1/1:4,20:24:54.15:597,54,0	1/1:5,27:32:81.22:896,81,0	1/1:6,20:26:57.15:625,57,0	1/1:2,12:14:30.08:332,30,0	1/1:8,20:28:57.07:614,57,0	1/1:3,13:16:26.86:299,27,0	0/0:17,0:17:38.95:0,39,333	1/1:2,19:21:54.15:597,54,0	0/0:29,0:29:59.50:0,60,222	0/1:6,8:14:10.20:219,0,10	1/1:2,12:14:36.10:398,36,0	1/1:3,29:33:90.06:955,90,0	1/1:1,8:9:12.03:133,12,0	1/1:2,24:26:66.18:725,66,0	1/1:0,32:32:84.23:929,84,0	1/1:4,18:22:25.10:505,25,0	1/1:0,19:19:42.11:465,42,0	1/1:4,29:33:88.76:944,89,0	1/1:6,36:43:70.03:980,70,0	1/1:5,13:18:27.07:299,27,0
chr10	26019543	.	TAC	T	1853.31	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=10.210;DP=625;FS=1.217;HRun=0;HaplotypeScore=78.0114;InbreedingCoeff=0.9976;MQ=94.49;MQ0=1;MQRankSum=-2.362;QD=38.61;ReadPosRankSum=-0.860;VQSLOD=5.1687;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:36.12:0,36,690	0/0:11,0:11:33.11:0,33,638	0/0:34,0:33:90.01:0,90,1630	0/0:25,0:25:72.25:0,72,1371	0/0:39,0:39:99:0,117,2204	0/0:24,0:24:72.25:0,72,1390	0/0:13,0:13:39.13:0,39,753	1/1:1,27:28:78.24:1148,78,0	0/0:28,0:28:78.27:0,78,1507	0/0:40,0:40:99:0,120,2312	0/0:20,0:20:60.21:0,60,1148	0/0:14,0:14:42.14:0,42,811	0/0:14,0:14:42.14:0,42,810	0/0:14,0:14:42.14:0,42,809	0/0:20,0:20:60.21:0,60,1150	0/0:17,0:17:51.17:0,51,985	1/1:0,20:20:54.18:827,54,0	0/0:9,0:9:21.07:0,21,390	0/0:16,0:16:48.16:0,48,924	0/0:35,0:35:99:0,105,1898	0/0:30,0:29:84.29:0,84,1599	0/0:20,0:20:57.20:0,57,1100	0/0:35,0:35:99:0,105,2028	0/0:17,0:17:51.17:0,51,984	0/0:17,0:17:51.17:0,51,984	0/0:24,0:24:72.25:0,72,1391	0/0:31,0:31:93.32:0,93,1795	0/0:17,0:17:51.17:0,51,982
chr10	26019905	.	TC	T	800.60	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.241;DP=615;FS=1.725;HRun=2;HaplotypeScore=63.9780;InbreedingCoeff=0.9986;MQ=84.46;MQ0=0;MQRankSum=-1.450;QD=30.79;ReadPosRankSum=1.235;VQSLOD=3.3296;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:42.13:0,42,609	0/0:12,0:12:36.12:0,36,539	0/0:20,0:20:54.17:0,54,788	0/0:22,0:22:63.21:0,63,903	0/0:43,0:43:99:0,120,1752	0/0:22,0:22:63.20:0,63,920	0/0:17,0:17:51.16:0,51,741	0/0:36,0:36:99:0,105,1538	0/0:28,0:28:84.28:0,84,1240	0/0:31,0:31:93.30:0,93,1357	0/0:23,0:23:66.22:0,66,986	0/0:14,0:14:42.13:0,42,611	0/0:19,0:19:51.17:0,51,763	0/0:19,0:19:57.18:0,57,834	1/1:0,26:26:69.22:895,69,0	0/0:15,0:15:45.12:0,45,617	0/0:10,0:10:30.10:0,30,448	0/0:12,0:12:30.06:0,30,424	0/0:12,0:12:36.09:0,36,516	0/0:27,0:27:75.23:0,75,1082	0/0:22,0:22:66.18:0,66,927	0/0:34,0:34:99:0,99,1394	0/0:24,0:24:69.18:0,69,996	0/0:24,0:24:72.20:0,72,1053	0/0:20,0:20:60.15:0,60,871	0/0:25,0:25:69.22:0,69,999	0/0:27,0:27:81.26:0,81,1193	0/0:17,0:17:42.07:0,42,602
chr10	26026504	.	TA	T	111.38	PASS	AC=2;AF=0.038;AN=52;BaseQRankSum=4.360;DP=257;FS=0.000;HRun=8;HaplotypeScore=26.8987;InbreedingCoeff=0.7310;MQ=65.90;MQ0=2;MQRankSum=0.393;QD=12.38;ReadPosRankSum=1.565;VQSLOD=1.3037;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:39.08:0,39,445	0/0:8,0:8:21.06:0,21,254	0/0:5,0:3:8:0,8,50	0/0:2,0:2:3.01:0,3,36	0/0:8,0:8:21.06:0,21,254	0/0:8,0:8:24.06:0,24,278	0/0:5,0:5:12.04:0,12,145	./.	0/0:12,0:12:33.10:0,33,399	0/0:12,0:12:36.11:0,36,434	0/0:13,0:13:39.12:0,39,471	0/0:7,0:7:21.05:0,21,242	0/0:7,0:7:21.06:0,21,254	0/0:7,0:7:21.05:0,21,244	1/1:1,8:9:21.03:203,21,0	0/0:5,0:5:15.05:0,15,181	./.	0/0:4,0:4:12.04:0,12,145	0/0:11,0:11:33.10:0,33,398	0/0:16,0:16:48.13:0,48,565	0/0:9,0:9:24.07:0,24,289	0/0:16,0:15:45.13:0,45,533	0/0:12,0:12:36.11:0,36,435	0/0:9,0:9:24.07:0,24,290	0/0:10,1:11:30.09:0,30,362	0/0:12,0:12:33.10:0,33,394	0/0:17,0:17:51.16:0,51,616	0/0:17,0:17:51.16:0,51,616
chr10	26027214	.	T	TG	1705.66	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-9.455;DP=502;FS=2.850;HRun=1;HaplotypeScore=68.2472;InbreedingCoeff=0.9651;MQ=83.52;MQ0=0;MQRankSum=-1.691;QD=37.90;ReadPosRankSum=-3.636;VQSLOD=2.6862;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:3,0:3:9.01:0,9,101	0/0:7,0:7:21.07:0,21,273	0/0:15,0:15:40.36:0,40,487	0/0:14,0:14:33.09:0,33,408	0/0:38,0:38:99:0,111,1412	0/0:26,0:26:78.23:0,78,980	0/0:9,0:9:27.07:0,27,336	1/1:1,35:36:99:1469,102,0	0/0:21,0:21:63.19:0,63,803	0/0:22,0:22:66.13:0,66,819	0/0:22,0:22:66.18:0,66,815	0/0:17,0:17:51.17:0,51,662	0/0:14,0:14:39.13:0,39,506	0/0:9,0:9:27.09:0,27,351	0/0:20,0:20:60.18:0,60,765	0/0:25,0:25:72.21:0,72,906	1/1:0,9:9:24.08:358,24,0	0/0:14,0:14:42.12:0,42,529	0/0:13,0:13:39.13:0,39,507	0/0:32,0:32:93.27:0,93,1167	0/0:9,0:9:24.06:0,24,296	0/0:20,0:20:60.20:0,60,779	0/0:26,0:26:78.23:0,78,986	0/0:11,0:11:33.09:0,33,413	0/0:16,0:16:48.16:0,48,623	0/0:28,0:28:81.26:0,81,1040	0/0:16,0:16:48.16:0,48,622	0/0:10,0:10:30.10:0,30,387
chr10	26028317	.	ATAT	A	1627.96	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.728;DP=455;FS=1.351;HRun=0;HaplotypeScore=61.1633;InbreedingCoeff=0.9076;MQ=69.38;MQ0=0;MQRankSum=-5.894;QD=40.70;ReadPosRankSum=-3.053;VQSLOD=3.7649;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:39.13:0,39,883	0/0:10,0:10:30.10:0,30,680	0/0:8,0:8:9.07:0,9,342	0/0:3,0:3:5.81:0,6,136	0/0:35,0:35:99:0,105,2194	0/0:16,0:16:48.16:0,48,1087	0/0:13,0:13:39.13:0,39,884	1/1:1,31:32:93.28:1497,93,0	0/0:18,0:18:51.16:0,51,1094	0/0:27,0:27:78.27:0,78,1718	0/0:28,0:28:81.28:0,81,1831	0/0:11,0:11:33.11:0,33,748	0/0:12,0:12:36.12:0,36,809	0/0:19,0:19:57.20:0,57,1253	0/0:15,0:15:45.15:0,45,1020	0/0:12,0:12:36.12:0,36,791	1/1:1,7:8:15.05:250,15,0	0/0:7,0:7:21.04:0,21,428	0/0:16,0:16:48.15:0,48,1005	0/0:34,0:34:99:0,99,2201	0/0:12,0:12:36.12:0,36,816	0/0:12,0:12:36.11:0,36,715	0/0:17,0:17:51.16:0,51,1113	0/0:7,0:7:21.07:0,21,476	0/0:15,0:15:45.15:0,45,1020	0/0:17,0:17:48.16:0,48,1088	0/0:25,0:25:69.23:0,69,1499	0/0:11,0:11:33.11:0,33,748
chr10	26028414	.	TA	T	1361.44	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.338;DP=480;FS=0.000;HRun=4;HaplotypeScore=43.5314;InbreedingCoeff=0.9783;MQ=71.27;MQ0=0;MQRankSum=-3.136;QD=26.18;ReadPosRankSum=-2.571;VQSLOD=1.5886;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:20.99:0,21,247	0/0:7,0:7:21.07:0,21,294	0/0:19,0:19:57.19:0,57,783	0/0:13,0:13:36.12:0,36,489	0/0:24,0:24:66.22:0,66,923	0/0:14,0:14:36.12:0,36,504	0/0:5,0:5:15.02:0,15,177	1/1:7,33:40:96.24:1123,96,0	0/0:31,0:31:90.30:0,90,1260	0/0:26,0:26:72.24:0,72,995	0/0:28,0:28:78.24:0,78,1060	0/0:17,0:17:51.17:0,51,713	0/0:21,0:21:63.21:0,63,882	0/0:14,0:14:39.13:0,39,545	0/0:9,0:9:27.09:0,27,378	0/0:12,0:12:30.10:0,30,420	1/1:2,10:12:30.09:360,30,0	0/0:12,0:12:36.12:0,36,504	0/0:24,0:24:72.24:0,72,1008	0/0:24,0:24:69.23:0,69,966	0/0:13,0:13:39.10:0,39,524	0/0:9,0:9:21.07:0,21,292	0/0:15,0:15:45.15:0,45,629	0/0:7,0:7:18.02:0,18,230	0/0:17,0:17:51.16:0,51,698	0/0:22,0:22:66.22:0,66,924	0/0:29,0:29:81.26:0,81,1119	0/0:7,0:7:21.07:0,21,294
chr10	26030683	.	T	TA	16328.62	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-7.876;DP=540;FS=3.623;HRun=6;HaplotypeScore=46.8057;InbreedingCoeff=0.9818;MQ=79.55;MQ0=0;MQRankSum=-5.713;QD=32.40;ReadPosRankSum=3.620;VQSLOD=5.1370;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,31:33:84.27:1057,84,0	1/1:0,4:4:12.04:151,12,0	0/0:14,0:14:26.88:0,27,243	0/0:11,0:11:18.62:0,19,153	1/1:4,28:32:84.23:1039,84,0	1/1:1,16:17:48.15:604,48,0	1/1:2,11:13:27.09:340,27,0	1/1:9,15:24:45.11:548,45,0	1/1:1,15:16:42.13:528,42,0	1/1:1,22:23:66.21:826,66,0	1/1:7,20:27:60.19:742,60,0	1/1:2,13:15:39.12:491,39,0	1/1:1,10:11:33.11:413,33,0	1/1:0,10:10:30.10:377,30,0	0/0:11,0:11:33.08:0,33,337	1/1:3,12:15:36.12:453,36,0	1/1:1,31:32:84.27:1057,84,0	1/1:0,20:20:57.18:717,57,0	1/1:2,28:30:84.27:1055,84,0	1/1:2,29:31:90.29:1131,90,0	1/1:2,6:8:18.06:226,18,0	1/1:2,15:17:45.14:566,45,0	1/1:3,28:31:75.24:944,75,0	1/1:1,10:11:27.09:340,27,0	1/1:2,22:24:60.19:755,60,0	1/1:3,27:30:81.22:989,81,0	1/1:2,19:21:51.16:641,51,0	1/1:0,9:9:27.09:340,27,0
chr10	26031131	.	GGA	G	815.91	PASS	AC=28;AF=0.700;AN=40;BaseQRankSum=-0.169;DP=112;FS=2.837;HRun=0;HaplotypeScore=25.9143;InbreedingCoeff=0.4983;MQ=67.94;MQ0=5;MQRankSum=-1.519;QD=17.36;ReadPosRankSum=0.362;VQSLOD=2.9782;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,3:3:3.01:43,3,0	1/1:1,0:1:3:26,3,0	0/0:16,0:7:8.99:0,9,101	0/0:18,0:5:8.98:0,9,76	1/1:3,2:5:2.84:42,3,0	1/1:0,1:1:3.01:43,3,0	1/1:3,4:7:6.02:86,6,0	0/0:6,0:5:15.04:0,15,164	./.	1/1:0,4:4:8.83:73,9,0	1/1:2,1:3:3.01:43,3,0	./.	1/1:2,3:5:14.73:150,15,0	./.	0/0:4,0:4:11.92:0,12,117	1/1:2,1:3:3.01:43,3,0	0/0:3,0:3:2.08:0,2,31	./.	./.	1/1:1,1:2:3.01:43,3,0	./.	./.	1/1:2,3:5:2.98:43,3,0	0/0:2,0:2:0.89:0,1,2	./.	1/1:0,3:3:9.03:123,9,0	1/1:1,3:4:12.03:151,12,0	1/1:0,1:1:3.01:43,3,0
chr10	26031135	.	A	AG	123.85	PASS	AC=6;AF=0.143;AN=42;BaseQRankSum=-3.078;DP=115;FS=4.121;HRun=7;HaplotypeScore=30.3047;InbreedingCoeff=0.3266;MQ=65.93;MQ0=6;MQRankSum=-2.174;QD=10.32;ReadPosRankSum=-0.817;VQSLOD=0.3359;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:5:2.59:0,3,10	./.	0/0:10,0:4:5.55:0,6,36	0/0:22,0:5:6:0,6,51	0/0:6,0:6:2.18:0,2,9	0/0:3,0:2:2.14:0,2,9	0/0:6,0:6:5.19:0,5,19	1/1:1,5:5:15.05:181,15,0	./.	0/0:5,0:5:0.47:0,0,1	0/0:4,0:4:2.59:0,3,10	./.	0/0:5,0:5:8.99:0,9,46	./.	0/0:3,0:3:3:0,3,29	0/0:1,0:1:2.60:0,3,10	1/1:0,3:3:3.48:37,3,0	./.	0/0:1,0:1:2.60:0,3,10	0/0:3,0:3:2.55:0,3,10	./.	1/1:3,0:3:1.55:4,2,0	0/0:4,0:4:2.60:0,3,10	0/0:1,0:1:2.50:0,2,9	./.	0/0:3,0:3:5.66:0,6,21	0/0:5,0:5:11.35:0,11,59	0/0:1,0:1:2.60:0,3,10
chr10	26031190	.	T	TAAA	3788.61	PASS	AC=44;AF=0.815;AN=54;BaseQRankSum=3.030;DP=203;FS=6.619;HRun=6;HaplotypeScore=61.3101;InbreedingCoeff=0.6874;MQ=80.15;MQ0=5;MQRankSum=-5.001;QD=34.76;ReadPosRankSum=0.570;VQSLOD=1.6165;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,1:2:6.01:81,6,0	1/1:2,0:2:6:54,6,0	0/0:36,0:11:0.06:0,0,149	0/0:23,0:11:14.47:0,14,146	1/1:10,1:10:29.92:322,30,0	1/1:5,0:5:15.04:220,15,0	1/1:5,0:5:15:173,15,0	0/0:20,0:18:51.16:0,51,260	1/1:6,0:6:17.97:146,18,0	1/1:7,0:7:18.03:241,18,0	1/1:8,1:9:26.90:261,27,0	1/1:2,0:2:6.02:98,6,0	1/1:4,0:4:11.97:97,12,0	1/1:2,0:2:6.02:95,6,0	0/0:6,0:6:17.81:0,18,150	1/1:3,0:3:9.01:100,9,0	0/0:8,0:8:23.22:0,23,137	1/1:1,0:1:3:25,3,0	1/1:10,0:10:30.08:419,30,0	1/1:6,1:8:21.04:288,21,0	./.	1/1:2,0:2:6.01:81,6,0	1/1:2,0:2:6.01:83,6,0	1/1:2,0:2:5.99:48,6,0	1/1:2,0:2:6.01:73,6,0	1/1:9,0:9:27.05:364,27,0	1/1:10,1:12:36.05:439,36,0	1/1:3,0:3:9:81,9,0
chr10	26031192	.	AT	A	372.94	PASS	AB=0.939;AC=8;AF=0.148;AN=54;BaseQRankSum=-5.392;DP=204;FS=5.780;HRun=14;HaplotypeScore=67.5119;InbreedingCoeff=0.2521;MQ=81.79;MQ0=5;MQRankSum=2.362;QD=3.97;ReadPosRankSum=-1.809;VQSLOD=0.6213;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:2,0:2:2.04:0,2,6	0/0:2,0:2:4.78:0,5,18	0/1:39,0:12:7.65:8,0,120	0/0:24,0:11:2.05:0,2,39	0/1:10,0:9:6.82:7,0,40	0/0:5,0:5:11.87:0,12,44	0/0:5,0:5:13.24:0,13,61	1/1:3,17:18:50.58:349,51,0	0/0:6,0:6:16.15:0,16,76	0/0:6,0:6:13.55:0,14,53	0/0:9,0:9:10.57:0,11,84	0/0:2,0:2:4.07:0,4,12	0/0:4,0:4:11.49:0,11,60	0/0:2,0:2:4.26:0,4,13	0/1:5,1:6:3.05:3,0,63	0/0:3,0:3:7.66:0,8,33	1/1:1,6:8:19.89:129,20,0	0/0:1,0:1:2.88:0,3,15	0/0:8,0:8:19.97:0,20,83	0/0:8,0:8:10.32:0,10,48	./.	0/0:2,0:2:2.88:0,3,15	0/0:2,0:2:4.90:0,5,18	0/0:2,0:2:5.75:0,6,30	0/0:2,0:2:4.07:0,4,12	0/1:8,1:9:3.87:4,0,47	0/0:12,0:12:21.71:0,22,104	0/0:3,0:3:7.46:0,7,32
chr10	26031214	.	G	GAA	6888.07	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=1.874;DP=245;FS=40.206;HRun=6;HaplotypeScore=67.7451;InbreedingCoeff=0.8190;MQ=76.04;MQ0=1;MQRankSum=-6.461;QD=43.87;ReadPosRankSum=2.455;VQSLOD=2.4966;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,5:5:15.05:253,15,0	1/1:1,3:4:12.04:199,12,0	0/0:24,0:11:12.45:0,12,121	0/0:17,0:9:8.85:0,9,90	1/1:0,10:10:30.10:507,30,0	1/1:0,3:3:9.03:152,9,0	1/1:2,5:7:18.06:290,18,0	0/0:26,0:26:63.16:0,63,747	1/1:2,5:7:18.02:273,18,0	1/1:1,7:8:21.07:342,21,0	1/1:1,12:13:36.12:599,36,0	1/1:0,4:4:12.04:203,12,0	1/1:1,6:7:18.06:304,18,0	1/1:1,3:4:12.01:173,12,0	0/0:8,0:8:21.06:0,21,256	1/1:0,4:4:12.04:202,12,0	0/0:11,0:11:33.10:0,33,395	1/1:1,1:2:5.98:71,6,0	1/1:4,12:16:42.14:675,42,0	1/1:3,9:12:30.10:490,30,0	1/1:0,1:1:3.01:50,3,0	1/1:1,2:3:9.03:137,9,0	1/1:0,4:4:12.04:203,12,0	1/1:0,3:3:9.03:152,9,0	1/1:4,7:11:30.06:447,30,0	1/1:3,9:12:27.09:456,27,0	1/1:0,14:14:36.12:608,36,0	1/1:1,2:3:6.02:101,6,0
chr10	26031248	.	G	GTTTT	5948.72	PASS	AB=1.000;AC=51;AF=0.911;AN=56;BaseQRankSum=-3.621;DP=296;FS=1.310;HRun=12;HaplotypeScore=87.3788;InbreedingCoeff=0.4175;MQ=61.22;MQ0=0;MQRankSum=-3.865;QD=21.63;ReadPosRankSum=-0.660;VQSLOD=3.3483;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:12,1:13:15.67:218,16,0	1/1:2,3:5:12.04:257,12,0	0/1:13,0:9:27.42:27,0,119	0/0:9,0:8:6.69:0,7,99	1/1:11,4:15:24.08:460,24,0	1/1:1,3:5:9.03:193,9,0	1/1:3,5:8:9.03:204,9,0	1/1:15,0:24:31.84:278,32,0	1/1:9,0:9:9.03:115,9,0	1/1:8,5:17:39.02:673,39,0	1/1:11,2:12:9.03:176,9,0	1/1:5,0:4:6.02:94,6,0	1/1:9,1:10:15.03:214,15,0	1/1:3,0:4:6.02:91,6,0	0/0:5,0:11:20.82:0,21,180	1/1:8,1:10:21.04:301,21,0	1/1:8,0:12:32.62:242,33,0	1/1:2,2:4:3.01:68,3,0	1/1:13,0:13:24.05:312,24,0	1/1:12,1:14:18.06:332,18,0	1/1:2,0:2:3.01:62,3,0	1/1:8,3:10:21.07:416,21,0	1/1:6,0:7:9.02:116,9,0	1/1:4,0:4:3.01:68,3,0	1/1:12,4:19:33.03:547,33,0	1/1:10,0:10:9:129,9,0	1/1:18,0:19:21.07:330,21,0	1/1:5,0:5:3.47:27,3,0
chr10	26031671	.	AGTGTGT	A	8961.71	PASS	AB=0.745;AC=42;AF=0.778;AN=54;BaseQRankSum=-0.794;DP=331;FS=0.641;HRun=0;HaplotypeScore=88.2688;InbreedingCoeff=0.6704;MQ=54.82;MQ0=3;MQRankSum=-5.964;QD=37.03;ReadPosRankSum=2.838;VQSLOD=4.1631;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:13,7:19:1.95:377,0,2	1/1:2,1:3:9.03:152,9,0	0/0:18,0:8:5.91:0,6,259	0/0:11,0:5:0.89:0,1,2	1/1:7,12:19:32.98:688,33,0	1/1:6,9:17:33.11:635,33,0	1/1:8,4:12:29.96:371,30,0	0/0:30,0:30:42.04:0,42,582	1/1:4,3:7:15.03:266,15,0	1/1:1,12:13:36.12:769,36,0	1/1:4,10:14:27.06:495,27,0	1/1:3,5:8:18.06:328,18,0	1/1:1,6:7:18.06:358,18,0	1/1:1,5:6:18.05:339,18,0	0/0:3,0:10:24.07:0,24,616	1/1:2,3:5:3.01:64,3,0	0/0:18,0:18:36.04:0,36,491	1/1:8,9:17:36.11:687,36,0	1/1:11,5:16:21:403,21,0	1/1:7,6:13:21.07:431,21,0	0/1:4,2:5:41.99:58,0,42	1/1:0,4:5:15.05:287,15,0	1/1:2,6:8:21.06:409,21,0	./.	1/1:1,10:11:18.06:375,18,0	1/1:5,5:10:20.94:357,21,0	1/1:9,14:23:51.14:983,51,0	1/1:0,2:2:6.02:128,6,0
chr10	26031694	.	GTA	G	1138.75	PASS	AB=1.000;AC=6;AF=0.107;AN=56;BaseQRankSum=-7.697;DP=361;FS=4.280;HRun=0;HaplotypeScore=115.8871;InbreedingCoeff=0.5584;MQ=48.89;MQ0=2;MQRankSum=3.907;QD=19.30;ReadPosRankSum=-2.757;VQSLOD=3.3756;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:18:16.49:0,16,89	0/0:6,0:6:10.58:0,11,84	0/0:18,0:8:20.53:0,21,211	0/0:14,0:8:23.54:0,24,203	0/0:20,0:21:24.89:0,25,139	0/0:17,0:17:32.38:0,32,178	0/0:10,0:10:17.92:0,18,122	1/1:14,8:22:62.05:712,62,0	0/0:5,0:5:9.71:0,10,55	0/0:16,0:16:29.37:0,29,116	0/0:14,0:14:19.31:0,19,124	0/0:12,0:12:31.18:0,31,207	0/0:10,0:10:17:0,17,97	0/0:8,0:8:9:0,9,39	0/0:11,0:11:27.06:0,27,333	0/0:6,0:6:5.49:0,5,31	1/1:9,8:17:47.92:543,48,0	0/0:21,0:21:37.92:0,38,228	0/0:16,0:15:33.72:0,34,225	0/1:11,0:11:1.07:1,0,51	0/1:9,0:8:9.01:9,0,70	0/0:5,0:5:7.10:0,7,22	0/0:9,0:9:11.80:0,12,61	0/0:6,0:6:5.98:0,6,47	0/0:13,0:13:11.18:0,11,62	0/0:16,0:16:37.55:0,38,228	0/0:22,0:22:40.22:0,40,207	0/0:7,0:7:17.76:0,18,125
chr10	26031740	.	CAT	C	10752.15	PASS	AB=0.917;AC=51;AF=0.911;AN=56;BaseQRankSum=0.861;DP=383;FS=3.171;HRun=0;HaplotypeScore=83.8952;InbreedingCoeff=0.7262;MQ=63.78;MQ0=1;MQRankSum=-2.835;QD=29.46;ReadPosRankSum=3.561;VQSLOD=6.5651;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,11:14:24.08:302,24,0	1/1:0,4:4:12.04:151,12,0	0/0:7,0:6:11.40:0,11,148	0/1:10,0:10:16.60:17,0,184	1/1:4,17:21:33.11:417,33,0	1/1:3,14:17:42.13:530,42,0	1/1:2,13:15:36.11:454,36,0	1/1:4,19:22:57.01:695,57,0	1/1:1,4:5:12.04:151,12,0	1/1:4,14:18:39.11:478,39,0	1/1:2,11:13:33.11:416,33,0	1/1:0,12:12:36.12:454,36,0	1/1:1,15:16:42.13:530,42,0	1/1:2,7:9:21.07:265,21,0	0/0:11,0:11:30.10:0,30,490	1/1:0,6:6:18.06:227,18,0	1/1:3,17:20:48.15:605,48,0	1/1:3,17:20:51.16:643,51,0	1/1:6,20:26:60.18:746,60,0	1/1:1,14:15:42.13:530,42,0	1/1:0,11:10:27.09:341,27,0	1/1:3,4:7:12.04:151,12,0	1/1:0,11:11:30.10:378,30,0	1/1:0,11:11:30.10:378,30,0	1/1:1,5:6:15.05:189,15,0	1/1:1,19:20:57.18:719,57,0	1/1:3,21:24:54.17:681,54,0	1/1:0,10:10:24.08:303,24,0
chr10	26032051	.	GGAA	G	349.03	PASS	AB=0.966;AC=16;AF=0.286;AN=56;BaseQRankSum=11.265;DP=610;FS=1.638;HRun=0;HaplotypeScore=194.7559;InbreedingCoeff=0.2050;MQ=52.99;MQ0=10;MQRankSum=-8.362;QD=1.27;ReadPosRankSum=10.358;VQSLOD=1.4708;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:27:2.61:3,0,75	0/0:8,0:8:4.43:0,4,69	0/0:21,0:7:18.05:0,18,241	0/0:18,0:4:9.03:0,9,140	0/0:28,0:28:43.61:0,44,462	0/1:19,0:19:2.48:2,0,42	0/0:17,0:17:8.82:0,9,101	0/0:38,0:38:99:0,102,1366	0/1:29,0:28:5.80:6,0,16	0/0:29,0:29:44.58:0,45,637	0/0:34,0:34:44.93:0,45,492	0/1:19,0:19:10.69:11,0,24	0/1:25,0:25:1.87:2,0,28	1/1:18,0:18:15.72:53,16,0	0/1:11,8:23:99:342,0,129	1/1:24,0:24:12.73:38,13,0	0/0:24,0:24:35.22:0,35,366	0/1:15,0:15:0:1,0,0	0/0:21,0:19:25.64:0,26,436	0/0:21,0:21:22.44:0,22,425	0/0:14,0:14:6.01:0,6,65	0/1:16,0:16:3.47:3,0,177	0/0:19,0:19:15.40:0,15,85	1/1:14,0:14:2.40:9,2,0	0/1:11,0:11:2.67:3,0,27	0/0:36,0:36:17.72:0,18,605	0/1:33,0:33:9.61:22,0,10	0/0:8,0:8:6.02:0,6,74
chr10	26032053	.	AAGGAAGGAATGG	A	19718.15	PASS	AB=0.844;AC=49;AF=0.875;AN=56;BaseQRankSum=4.006;DP=613;FS=9.678;HRun=0;HaplotypeScore=189.4491;InbreedingCoeff=0.3849;MQ=53.02;MQ0=10;MQRankSum=2.190;QD=34.53;ReadPosRankSum=3.513;VQSLOD=3.3076;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,24:26:29.88:786,30,0	1/1:0,8:8:15.05:321,15,0	0/0:23,0:7:17.92:0,18,299	0/0:19,0:4:11.87:0,12,162	1/1:2,26:28:60.03:1121,60,0	1/1:0,20:20:21.07:722,21,0	0/1:2,15:17:11.43:139,0,11	0/1:38,0:38:98.30:742,0,98	1/1:2,27:28:9.03:340,9,0	1/1:0,29:29:78.09:1875,78,0	1/1:2,32:34:64.12:1099,64,0	1/1:1,18:19:24.55:845,25,0	1/1:1,23:24:10.44:327,10,0	1/1:0,18:18:21.01:805,21,0	1/1:24,0:24:56.66:1416,57,0	1/1:0,24:24:21.40:803,21,0	0/1:24,0:24:19.54:20,0,347	1/1:0,15:15:6.49:220,6,0	1/1:3,19:20:52.38:943,52,0	1/1:0,20:20:54.13:1180,54,0	1/1:15,0:15:6.01:99,6,0	1/1:0,16:16:39.03:802,39,0	1/1:0,19:19:22.57:704,23,0	1/1:0,14:14:3.01:116,3,0	1/1:1,10:11:9.03:299,9,0	1/1:0,37:37:99:2495,105,0	1/1:0,31:31:40.07:1352,40,0	1/1:8,0:8:6.02:149,6,0
chr10	26032058	.	AGGAATGGAAGAAG	A	6402.07	PASS	AB=1.000;AC=40;AF=0.714;AN=56;BaseQRankSum=13.051;DP=612;FS=0.000;HRun=0;HaplotypeScore=241.8641;InbreedingCoeff=0.0788;MQ=52.97;MQ0=9;MQRankSum=-8.962;QD=12.19;ReadPosRankSum=11.871;VQSLOD=0.9911;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:26:0.53:285,1,0	0/1:8,0:8:68.39:68,0,76	0/0:28,0:9:27.09:0,27,573	0/0:19,0:6:15.05:0,15,328	0/1:27,0:27:99:207,0,229	1/1:20,0:20:21.06:280,21,0	0/1:17,0:17:22.14:22,0,35	0/0:39,0:39:95.26:0,95,725	1/1:28,0:27:9.03:153,9,0	0/1:29,0:29:87.02:338,0,87	0/1:33,0:33:99:157,0,382	1/1:19,0:19:24.52:425,25,0	1/1:23,0:23:10.44:140,10,0	1/1:18,0:18:21.04:367,21,0	1/1:17,8:25:60.17:1438,60,0	1/1:24,0:24:21.27:357,21,0	0/1:22,0:22:1.70:2,0,465	1/1:15,0:15:6.49:88,6,0	0/1:20,0:19:99:124,0,253	0/1:20,0:20:99:262,0,224	1/1:14,0:14:0.89:2,1,0	0/1:16,0:16:99:163,0,133	1/1:19,0:19:19.63:247,20,0	1/1:14,0:14:3.48:52,3,0	1/1:11,0:11:8.62:108,9,0	0/1:37,0:37:99:547,0,262	1/1:31,0:31:37.06:564,37,0	1/1:8,0:8:1.77:5,2,0
chr10	26032061	.	AATGG	A	10555.54	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=4.849;DP=611;FS=13.821;HRun=0;HaplotypeScore=166.1532;InbreedingCoeff=0.6712;MQ=53.08;MQ0=8;MQRankSum=4.000;QD=18.78;ReadPosRankSum=4.283;VQSLOD=3.4925;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:26:25.26:318,25,0	1/1:8,0:8:15.05:191,15,0	0/0:30,0:9:26.95:0,27,397	0/0:18,0:6:14.75:0,15,183	1/1:27,0:27:48.07:601,48,0	1/1:20,0:20:21.07:275,21,0	1/1:17,0:17:8.24:98,8,0	1/1:4,33:37:96.29:1332,96,0	1/1:28,0:27:9.03:121,9,0	1/1:29,0:29:77.54:1009,78,0	1/1:33,0:33:46.36:606,46,0	1/1:19,0:19:24.05:288,24,0	1/1:23,0:23:9.48:119,9,0	1/1:18,0:18:21.07:283,21,0	1/1:25,0:25:52.85:480,53,0	1/1:24,0:24:21.03:278,21,0	1/1:3,19:22:13.78:432,14,0	1/1:15,0:15:6.49:107,6,0	1/1:19,0:19:45:631,45,0	1/1:20,0:20:51.10:656,51,0	1/1:0,15:15:3.01:50,3,0	1/1:16,0:16:33.10:408,33,0	1/1:19,0:19:20.70:275,21,0	1/1:14,0:14:2.92:39,3,0	1/1:11,0:11:9.03:114,9,0	1/1:37,0:37:93.12:1269,93,0	1/1:31,0:31:36.09:479,36,0	1/1:0,8:8:6.02:99,6,0
chr10	26032067	.	AGAAG	A	987.25	PASS	AB=1.000;AC=27;AF=0.482;AN=56;BaseQRankSum=12.027;DP=618;FS=0.480;HRun=0;HaplotypeScore=200.1333;InbreedingCoeff=0.1565;MQ=53.96;MQ0=7;MQRankSum=-10.816;QD=2.42;ReadPosRankSum=10.238;VQSLOD=1.3554;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:26:17.81:18,0,70	0/1:8,0:8:18.08:18,0,77	0/0:31,0:9:11.95:0,12,139	0/0:21,0:9:19.27:0,19,296	0/0:24,0:24:4.26:0,4,199	1/1:20,0:20:8.57:35,9,0	0/0:18,0:18:5.64:0,6,71	0/0:37,0:37:63.51:0,64,624	1/1:28,0:27:7.71:30,8,0	0/1:28,0:28:0.10:0,0,225	0/0:32,0:32:16.75:0,17,287	0/1:20,0:20:24.75:63,0,25	1/1:23,0:23:6.51:27,7,0	1/1:18,0:18:19.33:86,19,0	1/1:16,8:24:45.93:651,46,0	1/1:23,0:23:18.22:74,18,0	0/1:22,0:22:9.35:9,0,129	1/1:15,0:15:3.27:8,3,0	0/0:23,0:23:17.91:0,18,426	0/1:20,0:20:9.26:9,0,194	0/0:16,0:16:6.01:0,6,80	0/1:18,0:18:3.92:4,0,248	0/1:20,0:20:13.87:14,0,34	0/1:15,0:15:5.94:6,0,51	1/1:10,0:11:5.12:20,5,0	0/1:38,0:38:21.13:21,0,503	0/1:31,0:31:36.44:70,0,36	0/0:8,0:8:6:0,6,55
chr10	26032685	.	T	TG	24603.62	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-8.272;DP=681;FS=0.370;HRun=0;HaplotypeScore=68.7808;InbreedingCoeff=0.9995;MQ=90.84;MQ0=0;MQRankSum=-7.187;QD=44.33;ReadPosRankSum=6.301;VQSLOD=4.5580;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,23:23:66.23:1055,66,0	1/1:0,12:12:36.12:576,36,0	0/0:30,0:31:70.79:0,71,1100	0/0:21,0:21:57.18:0,57,763	1/1:0,19:19:57.19:911,57,0	1/1:0,26:26:75.26:1199,75,0	1/1:1,20:21:54.18:863,54,0	0/0:32,0:32:93.28:0,93,1239	1/1:0,33:33:96.33:1535,96,0	1/1:1,46:47:99:2157,135,0	1/1:0,22:22:66.23:1053,66,0	1/1:0,21:21:60.20:959,60,0	1/1:1,31:32:84.29:1339,84,0	1/1:0,27:27:75.26:1198,75,0	0/0:24,0:24:72.24:0,72,1007	1/1:0,26:26:66.23:1055,66,0	0/0:18,0:18:54.16:0,54,735	1/1:0,10:10:27.09:432,27,0	1/1:1,17:18:51.17:816,51,0	1/1:0,38:38:99:1679,105,0	1/1:0,31:31:75.26:1199,75,0	1/1:0,23:23:69.24:1100,69,0	1/1:0,21:21:63.21:1007,63,0	1/1:1,22:23:60.20:959,60,0	1/1:0,17:17:48.16:768,48,0	1/1:0,28:28:81.26:1256,81,0	1/1:1,26:26:66.23:1055,66,0	1/1:1,9:10:27.09:432,27,0
chr10	26033534	.	C	CT	13100.52	PASS	AB=0.533;AC=47;AF=0.839;AN=56;BaseQRankSum=-7.815;DP=611;FS=5.639;HRun=9;HaplotypeScore=83.1225;InbreedingCoeff=0.8778;MQ=67.75;MQ0=0;MQRankSum=-2.509;QD=24.72;ReadPosRankSum=5.121;VQSLOD=5.1101;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,32:36:58.17:870,58,0	1/1:0,7:7:21.06:232,21,0	0/0:19,0:17:32.85:0,33,270	0/0:13,0:13:17.69:0,18,213	1/1:8,35:43:93.16:993,93,0	1/1:1,16:16:45.12:498,45,0	1/1:4,17:21:22.09:471,22,0	0/0:7,0:25:34.62:0,35,101	1/1:1,15:16:45.12:498,45,0	1/1:7,29:38:86.86:896,87,0	1/1:4,31:35:66.93:916,67,0	1/1:1,12:13:33.09:365,33,0	1/1:2,17:19:22.69:442,23,0	1/1:1,24:25:60.16:664,60,0	1/1:1,16:17:39.11:431,39,0	1/1:2,22:24:34.11:605,34,0	0/0:2,0:24:30.55:0,31,90	1/1:2,19:21:25.05:490,25,0	1/1:3,11:14:30.07:323,30,0	1/1:4,26:30:72.13:771,72,0	0/1:1,7:8:8:148,0,8	1/1:2,16:18:48.13:531,48,0	1/1:5,18:23:39.10:431,39,0	1/1:3,11:13:24.06:265,24,0	1/1:3,17:20:39.11:431,39,0	1/1:5,28:33:61.15:892,61,0	1/1:4,24:28:37.12:638,37,0	1/1:0,9:9:27.07:299,27,0
chr10	26035749	.	C	CT	10417.37	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=4.453;DP=399;FS=2.304;HRun=5;HaplotypeScore=50.4332;InbreedingCoeff=0.9459;MQ=71.77;MQ0=0;MQRankSum=-1.186;QD=32.86;ReadPosRankSum=4.676;VQSLOD=5.0994;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,19:19:48.16:632,48,0	1/1:0,4:4:9.03:118,9,0	0/0:5,0:5:9.02:0,9,95	0/0:8,0:8:17.96:0,18,172	1/1:1,19:20:54.13:687,54,0	1/1:1,16:17:48.16:632,48,0	1/1:1,10:11:30.10:395,30,0	0/0:40,0:39:99:0,108,1154	1/1:2,13:15:33.11:434,33,0	1/1:5,27:32:84.26:1080,84,0	1/1:1,20:21:54.18:711,54,0	1/1:0,10:10:24.08:316,24,0	1/1:1,10:11:21.07:276,21,0	1/1:0,8:8:15.05:197,15,0	0/0:11,0:11:27.07:0,27,290	1/1:0,13:13:39.13:513,39,0	0/0:18,0:18:54.14:0,54,580	1/1:1,6:7:15.05:197,15,0	1/1:5,14:19:42.12:537,42,0	1/1:0,17:17:48.16:632,48,0	1/1:0,8:8:21.07:276,21,0	1/1:2,6:8:18.06:237,18,0	1/1:2,10:12:30.10:392,30,0	1/1:0,3:3:9.03:118,9,0	1/1:3,14:17:30.10:395,30,0	1/1:1,16:17:48.14:616,48,0	1/1:2,12:14:36.12:474,36,0	1/1:0,14:14:42.14:553,42,0
chr10	26035876	.	G	GTA	10810.37	PASS	AB=1.000;AC=45;AF=0.833;AN=54;BaseQRankSum=-8.795;DP=337;FS=1.305;HRun=0;HaplotypeScore=37.3490;InbreedingCoeff=0.8199;MQ=74.29;MQ0=1;MQRankSum=-1.498;QD=40.34;ReadPosRankSum=5.121;VQSLOD=6.5591;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,19:22:51.17:867,51,0	1/1:1,4:5:12.04:204,12,0	0/0:10,0:10:15.03:0,15,180	0/1:4,0:4:1.17:1,0,42	1/1:1,21:23:60.21:1019,60,0	1/1:4,22:26:63.22:1072,63,0	1/1:0,4:4:9.03:153,9,0	0/0:35,0:35:78.24:0,78,989	1/1:1,6:7:18.06:306,18,0	1/1:2,15:17:45.15:766,45,0	1/1:1,13:14:36.12:612,36,0	1/1:2,6:8:18.06:305,18,0	1/1:0,10:10:30.10:506,30,0	1/1:2,6:8:18.06:306,18,0	0/0:6,0:6:12.03:0,12,142	1/1:1,4:5:12.04:204,12,0	0/0:15,0:15:36.10:0,36,451	1/1:6,9:15:33.09:522,33,0	1/1:3,13:16:39.13:664,39,0	1/1:2,12:14:30.10:509,30,0	1/1:0,7:7:18.06:306,18,0	./.	1/1:0,6:6:6.02:102,6,0	1/1:0,1:1:3.01:51,3,0	1/1:0,13:13:36.12:612,36,0	1/1:1,12:13:36.12:612,36,0	1/1:1,17:17:42.14:714,42,0	1/1:4,6:10:24.08:396,24,0
chr10	26036369	.	CT	C	19931.79	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=5.989;DP=664;FS=0.000;HRun=1;HaplotypeScore=85.5766;InbreedingCoeff=0.9985;MQ=95.64;MQ0=0;MQRankSum=-7.442;QD=38.11;ReadPosRankSum=6.725;VQSLOD=4.6403;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,32:32:90.30:1257,90,0	1/1:0,8:8:21.07:293,21,0	0/0:34,0:33:99:0,99,1460	0/0:28,0:29:75.36:0,75,1235	1/1:0,29:29:81.27:1130,81,0	1/1:0,17:17:45.15:629,45,0	1/1:0,21:21:60.20:838,60,0	0/0:27,0:27:81.25:0,81,1224	1/1:0,29:29:69.23:963,69,0	1/1:0,28:28:84.28:1171,84,0	1/1:0,27:27:72.24:1006,72,0	1/1:0,18:18:48.16:671,48,0	1/1:0,18:18:48.16:670,48,0	1/1:0,31:31:90.30:1257,90,0	0/0:26,0:26:78.24:0,78,1201	1/1:0,27:27:75.25:1047,75,0	0/0:25,0:25:75.26:0,75,1191	1/1:1,12:13:33.11:461,33,0	1/1:0,16:16:42.14:587,42,0	1/1:0,24:24:66.22:917,66,0	1/1:0,30:30:84.28:1173,84,0	1/1:0,24:24:63.21:879,63,0	1/1:0,23:23:66.22:922,66,0	1/1:0,29:29:75.25:1048,75,0	1/1:0,18:18:48.16:671,48,0	1/1:1,31:32:93.31:1294,93,0	1/1:0,21:21:51.17:711,51,0	1/1:0,8:8:24.08:335,24,0
chr10	26037804	.	CG	C	14861.52	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=12.680;DP=675;FS=0.000;HRun=1;HaplotypeScore=136.3669;InbreedingCoeff=0.9995;MQ=64.01;MQ0=1;MQRankSum=0.610;QD=26.92;ReadPosRankSum=5.718;VQSLOD=4.5556;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,31:34:78.20:825,78,0	1/1:2,12:14:30.07:315,30,0	0/0:21,0:19:50.86:0,51,686	0/0:20,0:18:50.88:0,51,682	1/1:0,22:22:57.14:603,57,0	1/1:4,24:28:72.18:760,72,0	1/1:1,12:13:33.08:349,33,0	0/0:34,0:34:99:0,102,1417	1/1:2,22:24:63.16:666,63,0	1/1:2,28:30:84.20:881,84,0	1/1:0,23:23:63.16:666,63,0	1/1:3,18:21:54.12:564,54,0	1/1:2,21:23:66.15:690,66,0	1/1:2,32:34:99:1039,99,0	0/0:26,0:26:78.27:0,78,1238	1/1:3,22:25:63.08:645,63,0	0/0:22,0:21:66.15:0,66,990	1/1:3,24:27:60.15:634,60,0	1/1:1,14:14:42.11:444,42,0	1/1:3,20:22:60.15:634,60,0	1/1:3,29:32:84.21:888,84,0	1/1:0,26:26:69.17:729,69,0	1/1:5,26:31:72.18:762,72,0	1/1:2,14:16:36.09:381,36,0	1/1:0,14:14:39.10:412,39,0	1/1:4,27:31:78.20:825,78,0	1/1:7,25:32:84.15:864,84,0	1/1:0,12:12:27.07:286,27,0
chr10	26038220	.	A	AT	12727.53	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-10.847;DP=580;FS=4.639;HRun=8;HaplotypeScore=54.7930;InbreedingCoeff=0.9541;MQ=66.45;MQ0=1;MQRankSum=0.374;QD=26.97;ReadPosRankSum=5.607;VQSLOD=5.0907;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,27:29:60.18:689,60,0	1/1:1,11:12:26.72:311,27,0	0/0:19,0:18:6.23:0,6,260	0/0:15,0:14:23.07:0,23,226	1/1:3,20:23:48.14:554,48,0	1/1:5,14:19:30.09:346,30,0	1/1:1,6:7:12.04:139,12,0	0/0:34,0:34:87.02:0,87,791	1/1:4,25:29:44.75:769,45,0	1/1:1,22:23:66.20:762,66,0	1/1:1,33:34:93.28:1073,93,0	1/1:1,13:14:36.11:414,36,0	1/1:4,24:28:63.19:727,63,0	1/1:2,18:20:51.15:589,51,0	0/0:22,0:22:66.01:0,66,596	1/1:1,18:19:48.14:554,48,0	0/0:17,0:17:36.01:0,36,329	1/1:4,7:11:14.98:203,15,0	1/1:7,16:22:48.14:554,48,0	1/1:2,22:24:63.19:727,63,0	1/1:4,20:24:11.26:638,11,0	1/1:1,18:19:48.14:551,48,0	1/1:2,22:24:57.17:658,57,0	1/1:2,12:14:33.09:381,33,0	1/1:1,20:21:51.15:589,51,0	1/1:3,25:28:50.74:818,51,0	1/1:3,17:20:42.11:476,42,0	1/1:1,6:7:18.05:208,18,0
chr10	26038906	.	TATATATATACAC	T	1543.41	PASS	AB=1.000;AC=20;AF=0.500;AN=40;BaseQRankSum=-0.114;DP=143;FS=3.621;HRun=0;HaplotypeScore=61.0691;InbreedingCoeff=0.0105;MQ=65.50;MQ0=3;MQRankSum=-1.812;QD=14.98;ReadPosRankSum=1.150;VQSLOD=1.4443;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:8,0:6:9.11:19,0,9	0/0:3,0:3:8.95:0,9,66	0/0:5,0:4:11.66:0,12,137	0/1:4,0:2:16.30:16,0,28	./.	0/0:6,0:6:3.01:0,3,68	1/1:3,0:3:9.03:146,9,0	0/1:17,0:14:20.15:20,0,108	0/0:2,0:2:3.01:0,3,72	0/1:3,0:3:10.28:43,0,10	0/0:7,0:7:3:0,3,25	1/1:3,0:3:2.99:24,3,0	1/1:6,0:6:5.99:48,6,0	0/1:3,0:3:14.97:89,0,15	./.	./.	0/0:9,0:9:3.53:0,4,68	1/1:6,0:6:16.30:247,16,0	1/1:1,13:14:28.69:649,29,0	./.	./.	./.	./.	./.	0/1:6,0:6:8.85:19,0,9	0/1:4,0:4:59.68:60,0,104	0/1:15,0:15:61.47:117,0,61	1/1:11,0:11:9.03:186,9,0
chr10	26038908	.	TATATATACAC	T	2106.63	PASS	AB=0.987;AC=25;AF=0.595;AN=42;BaseQRankSum=-1.726;DP=150;FS=2.203;HRun=0;HaplotypeScore=54.2695;InbreedingCoeff=0.1044;MQ=66.74;MQ0=3;MQRankSum=-1.749;QD=17.85;ReadPosRankSum=1.957;VQSLOD=1.7683;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:8,0:6:3.62:64,0,4	1/1:3,0:3:6.01:74,6,0	0/0:7,0:6:17.68:0,18,260	0/1:5,0:3:6.47:6,0,95	./.	0/0:7,0:7:3.01:0,3,42	1/1:3,0:3:9.03:146,9,0	0/1:17,0:14:46.72:47,0,63	0/0:2,0:2:5.50:0,6,39	1/1:3,0:3:5.38:58,5,0	0/0:7,0:7:3:0,3,25	1/1:4,0:4:3.01:47,3,0	1/1:6,0:6:6.02:95,6,0	0/1:3,0:3:13.54:89,0,14	0/0:1,0:1:3.01:0,3,48	./.	0/1:9,0:10:12.74:24,0,13	1/1:6,0:6:18.06:325,18,0	1/1:14,0:14:23.11:561,23,0	./.	./.	./.	./.	./.	1/1:6,0:6:6.01:73,6,0	0/1:4,0:4:51.84:83,0,52	0/1:15,0:15:32.98:251,0,33	1/1:0,11:11:9.03:304,9,0
chr10	26038910	.	TATATACAC	T	2652.24	PASS	AB=0.807;AC=29;AF=0.690;AN=42;BaseQRankSum=-0.946;DP=155;FS=1.111;HRun=0;HaplotypeScore=47.9227;InbreedingCoeff=0.2002;MQ=67.24;MQ0=3;MQRankSum=-2.403;QD=22.10;ReadPosRankSum=1.692;VQSLOD=2.4301;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:7,1:6:0.81:103,0,1	1/1:4,0:4:3.21:139,3,0	0/0:7,0:6:17.68:0,18,261	0/0:6,0:4:1.04:0,1,162	./.	0/0:7,0:7:2.87:0,3,15	1/1:3,0:3:9.03:146,9,0	0/1:18,0:15:15.12:29,0,15	0/1:2,0:2:4.06:19,0,4	1/1:4,0:4:8.94:149,9,0	./.	1/1:0,4:4:3.01:86,3,0	1/1:0,6:6:6.02:175,6,0	1/1:3,0:3:6.02:98,6,0	0/0:1,0:1:3.01:0,3,48	1/1:1,0:1:3.01:49,3,0	1/1:2,0:10:8.89:105,9,0	1/1:5,1:6:18.06:293,18,0	1/1:13,0:13:36.10:550,36,0	./.	./.	./.	./.	./.	0/1:2,4:6:3.05:82,0,3	0/1:1,5:6:8.31:175,0,8	1/1:4,11:15:1.89:380,2,0	1/1:11,0:11:9.03:204,9,0
chr10	26039969	.	A	ATC	22966.57	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-13.383;DP=634;FS=0.788;HRun=0;HaplotypeScore=68.6637;InbreedingCoeff=0.9936;MQ=73.08;MQ0=2;MQRankSum=-5.866;QD=45.93;ReadPosRankSum=6.868;VQSLOD=6.3387;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,22:24:60.21:1098,60,0	1/1:0,5:5:15.05:275,15,0	0/0:24,0:23:66.21:0,66,923	0/0:28,0:28:69.22:0,69,947	1/1:1,26:28:72.18:1246,72,0	1/1:1,27:26:69.24:1263,69,0	1/1:4,16:20:48.16:872,48,0	0/0:31,0:31:90.29:0,90,1257	1/1:1,17:19:45.15:807,45,0	1/1:3,21:24:66.23:1183,66,0	1/1:0,21:21:57.20:1044,57,0	1/1:0,10:10:21.07:384,21,0	1/1:1,25:27:66.23:1209,66,0	1/1:0,28:28:72.25:1319,72,0	0/0:25,0:25:66.19:0,66,908	1/1:0,16:16:42.14:770,42,0	0/0:26,0:26:21.96:0,22,935	1/1:1,28:29:75.26:1373,75,0	1/1:2,12:14:36.10:622,36,0	1/1:1,31:33:84.29:1535,84,0	1/1:1,20:21:54.19:990,54,0	1/1:1,14:15:39.13:678,39,0	1/1:0,28:31:77.62:1428,78,0	1/1:2,15:18:38.80:670,39,0	1/1:0,21:22:63.22:1155,63,0	1/1:0,24:24:72.25:1300,72,0	1/1:4,29:33:75.26:1362,75,0	1/1:2,8:10:21.07:384,21,0
chr10	26041553	.	C	CT	4549.97	PASS	AB=0.738;AC=46;AF=0.821;AN=56;BaseQRankSum=-5.678;DP=485;FS=5.821;HRun=13;HaplotypeScore=49.8744;InbreedingCoeff=0.2027;MQ=63.32;MQ0=4;MQRankSum=0.289;QD=10.27;ReadPosRankSum=0.900;VQSLOD=3.9122;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:11,17:29:4.34:253,0,4	1/1:2,3:5:6.01:56,6,0	0/0:15,1:8:7.44:0,7,33	0/1:19,1:12:8.10:46,0,8	1/1:11,10:21:3.40:166,3,0	1/1:2,20:22:36.04:334,36,0	1/1:6,10:16:3.45:166,3,0	0/1:26,2:28:15.48:15,0,168	1/1:2,8:8:9.01:84,9,0	1/1:10,7:18:17.83:145,18,0	1/1:11,16:27:1.55:219,2,0	0/1:7,9:17:5.65:83,0,6	1/1:2,11:13:17.97:159,18,0	1/1:4,7:11:18.02:167,18,0	1/1:2,7:8:15.02:139,15,0	1/1:1,9:10:21.02:195,21,0	0/0:24,0:26:48.52:0,49,319	1/1:6,9:16:4.01:162,4,0	1/1:5,13:19:29.15:288,29,0	1/1:9,18:28:28.62:360,29,0	0/1:5,6:11:2.56:121,0,3	1/1:2,5:7:14.81:117,15,0	1/1:4,12:19:32.66:271,33,0	0/1:9,12:22:5.96:264,0,6	1/1:2,9:11:15.02:139,15,0	1/1:8,15:23:32.92:291,33,0	1/1:6,13:20:22.88:236,23,0	1/1:9,0:9:8.98:73,9,0
chr10	26041698	.	C	CT	888.17	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-9.307;DP=416;FS=8.377;HRun=10;HaplotypeScore=63.3067;InbreedingCoeff=0.8971;MQ=57.95;MQ0=2;MQRankSum=0.454;QD=15.86;ReadPosRankSum=-2.491;VQSLOD=2.9256;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:20:41.93:0,42,345	0/0:5,0:6:14.01:0,14,104	0/0:5,0:5:8.97:0,9,72	0/0:7,0:4:11.99:0,12,98	0/0:25,0:25:56.90:0,57,465	0/0:13,0:13:35.96:0,36,296	0/0:12,0:12:17.96:0,18,148	1/1:11,24:33:9.21:608,9,0	0/0:8,0:8:17.96:0,18,148	0/0:15,0:15:35.94:0,36,295	0/0:19,0:20:46.96:0,47,373	0/0:13,0:13:32.96:0,33,270	0/0:9,0:9:20.95:0,21,169	0/0:19,0:19:38.93:0,39,320	0/0:12,0:11:29.94:0,30,243	0/0:10,0:10:20.96:0,21,172	1/1:3,18:21:17.46:391,17,0	0/0:16,0:16:44.27:0,44,344	0/0:10,0:11:22.96:0,23,172	0/0:18,0:19:37.95:0,38,301	0/0:18,0:18:44.91:0,45,369	0/0:15,0:15:44.95:0,45,369	0/0:12,0:12:26.94:0,27,218	0/0:14,0:14:38.95:0,39,320	0/0:15,0:15:26.83:0,27,222	0/0:16,0:16:32.94:0,33,271	0/0:17,0:17:44.94:0,45,369	0/0:12,0:12:35.96:0,36,296
chr10	26042070	.	A	AT	11066.01	PASS	AC=50;AF=0.962;AN=52;BaseQRankSum=-2.020;DP=584;FS=0.972;HRun=8;HaplotypeScore=59.4152;InbreedingCoeff=0.9486;MQ=41.02;MQ0=55;MQRankSum=-1.303;QD=20.84;ReadPosRankSum=1.705;VQSLOD=4.9813;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,18:20:42.05:456,42,0	1/1:1,8:9:21.02:227,21,0	./.	./.	1/1:7,33:36:63.15:712,63,0	1/1:2,24:25:42.08:470,42,0	1/1:1,11:11:24.07:277,24,0	1/1:1,23:21:57.13:641,57,0	1/1:2,15:17:39.12:450,39,0	1/1:4,24:28:69.13:767,69,0	1/1:2,26:25:32.85:351,33,0	1/1:2,17:18:39.04:416,39,0	1/1:1,14:15:24.07:277,24,0	1/1:4,19:23:47.97:540,48,0	0/0:30,0:29:53.02:0,53,463	1/1:1,21:22:45.13:519,45,0	1/1:4,21:22:45.13:519,45,0	1/1:2,18:15:30.09:346,30,0	1/1:0,13:11:33.10:381,33,0	1/1:4,29:32:69.12:766,69,0	1/1:0,16:13:30.09:346,30,0	1/1:1,13:14:17.97:178,18,0	1/1:3,17:19:21.06:242,21,0	1/1:1,13:14:27.08:311,27,0	1/1:2,19:21:39.12:450,39,0	1/1:3,19:21:51.15:588,51,0	1/1:6,29:35:63.02:707,63,0	1/1:3,6:7:12.02:128,12,0
chr10	26045835	.	T	TGTATAT	1337.07	PASS	AC=26;AF=1.000;AN=26;DP=32;FS=0.000;HRun=0;HaplotypeScore=11.7420;InbreedingCoeff=-0.1472;MQ=51.57;MQ0=0;QD=47.75;VQSLOD=2.8250;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,0:1:3:25,3,0	./.	1/1:0,1:1:3.01:106,3,0	./.	1/1:2,0:4:6.02:144,6,0	./.	1/1:1,0:2:6.01:128,6,0	1/1:3,0:3:3:27,3,0	./.	1/1:1,0:2:6.01:131,6,0	./.	./.	./.	./.	1/1:1,0:1:3.01:73,3,0	./.	1/1:3,0:5:12.03:272,12,0	./.	./.	./.	1/1:3,0:3:6.02:127,6,0	1/1:0,0:1:3.01:103,3,0	1/1:0,0:1:3.01:103,3,0	./.	./.	1/1:1,0:1:3:26,3,0	1/1:3,0:3:6.02:143,6,0	./.
chr10	26046540	.	G	GTTC	12511.62	PASS	AB=0.599;AC=46;AF=0.920;AN=50;BaseQRankSum=1.211;DP=363;FS=16.725;HRun=0;HaplotypeScore=74.6474;InbreedingCoeff=0.3346;MQ=27.52;MQ0=39;MQRankSum=-4.495;QD=39.22;ReadPosRankSum=-1.874;VQSLOD=4.2561;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,14:16:33.11:679,33,0	1/1:0,5:5:12.04:283,12,0	./.	./.	1/1:3,7:8:9.03:212,9,0	1/1:3,23:24:54.19:1251,54,0	./.	1/1:11,15:20:51.17:1086,51,0	1/1:0,13:11:24.08:566,24,0	1/1:3,12:14:42.14:945,42,0	1/1:1,7:8:15.05:319,15,0	1/1:4,12:13:27.09:617,27,0	1/1:1,18:16:39.13:896,39,0	1/1:1,9:7:12.04:283,12,0	0/0:12,0:11:30.10:0,30,523	1/1:1,10:11:24.08:566,24,0	0/1:3,5:8:90.82:175,0,91	1/1:1,4:4:9.03:191,9,0	1/1:6,8:9:24.04:493,24,0	1/1:0,16:13:30.10:685,30,0	1/1:0,3:3:3.01:71,3,0	1/1:1,14:14:27.09:610,27,0	1/1:4,7:7:12.04:283,12,0	1/1:0,5:4:6.02:137,6,0	1/1:4,13:14:24.08:500,24,0	1/1:2,12:10:30.06:614,30,0	1/1:3,19:15:45.15:988,45,0	0/1:2,5:7:61.82:62,0,97
chr10	26048967	.	C	CT	15956.09	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-8.780;DP=645;FS=2.769;HRun=8;HaplotypeScore=57.5798;InbreedingCoeff=0.9910;MQ=68.49;MQ0=1;MQRankSum=-2.952;QD=27.61;ReadPosRankSum=2.931;VQSLOD=5.5129;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,24:31:38.74:699,39,0	1/1:3,11:14:33.10:381,33,0	0/0:22,0:18:23.74:0,24,240	0/0:17,0:13:20.66:0,21,188	1/1:2,41:43:99:1266,111,0	1/1:4,24:28:69.21:796,69,0	1/1:2,20:22:60.18:692,60,0	1/1:7,23:30:17.25:677,17,0	1/1:6,19:25:57.17:657,57,0	1/1:4,16:20:54.16:620,54,0	1/1:1,31:32:87.26:1004,87,0	1/1:2,13:15:36.11:415,36,0	1/1:3,22:25:60.18:692,60,0	1/1:1,17:18:48.14:554,48,0	0/0:28,0:28:75.02:0,75,682	1/1:0,12:12:33.10:381,33,0	1/1:4,21:25:63.62:713,64,0	1/1:5,7:12:24.07:275,24,0	1/1:4,14:18:42.12:485,42,0	1/1:3,25:28:72.21:829,72,0	1/1:2,8:10:26.91:291,27,0	1/1:2,18:21:26.73:541,27,0	1/1:6,25:31:70.34:796,70,0	1/1:3,20:24:60.01:672,60,0	1/1:4,17:21:48.14:554,48,0	1/1:3,26:29:78.22:889,78,0	1/1:4,26:30:72.21:831,72,0	1/1:6,8:14:21.06:242,21,0
chr10	26049831	.	GA	G	585.31	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-0.814;DP=557;FS=3.065;HRun=5;HaplotypeScore=80.7704;InbreedingCoeff=0.8857;MQ=75.77;MQ0=0;MQRankSum=-1.713;QD=26.61;ReadPosRankSum=0.626;VQSLOD=3.4837;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:75.19:0,75,985	0/0:7,0:7:21.07:0,21,287	0/0:15,0:15:42.13:0,42,556	0/0:13,0:13:5.09:0,5,334	0/0:20,0:20:42.07:0,42,541	0/0:13,0:13:39.13:0,39,533	0/0:27,0:27:69.23:0,69,944	0/0:30,0:30:66.20:0,66,872	0/0:20,0:20:57.15:0,57,731	0/0:16,0:16:42.14:0,42,574	0/0:13,0:13:30.56:0,31,397	0/0:21,0:21:57.18:0,57,755	0/0:25,0:25:75.20:0,75,947	0/0:23,0:23:69.19:0,69,905	1/1:1,21:22:60.17:680,60,0	0/0:18,0:18:51.17:0,51,698	0/0:39,0:39:99:0,114,1541	0/0:12,0:12:36.07:0,36,441	0/0:17,0:17:51.17:0,51,698	0/0:19,0:19:51.14:0,51,662	0/0:31,0:31:75.21:0,75,993	0/0:18,0:18:51.12:0,51,648	0/0:17,0:17:42.07:0,42,560	0/0:22,0:22:60.20:0,60,821	0/0:15,0:15:42.11:0,42,542	0/0:14,0:14:36.06:0,36,442	0/0:27,0:27:78.22:0,78,1010	0/0:14,0:14:39.13:0,39,533
chr10	26050057	.	A	AT	2193.55	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=4.106;DP=663;FS=1.056;HRun=5;HaplotypeScore=66.0757;InbreedingCoeff=0.9444;MQ=79.33;MQ0=0;MQRankSum=-0.622;QD=32.26;ReadPosRankSum=-1.542;VQSLOD=3.6330;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:84.20:0,84,903	0/0:11,0:11:30.08:0,30,322	0/0:20,0:20:56.92:0,57,582	0/0:10,0:10:18.04:0,18,193	0/0:22,0:22:63.16:0,63,677	0/0:25,0:25:75.19:0,75,806	0/0:23,0:23:60.15:0,60,643	1/1:5,32:37:96.30:1250,96,0	0/0:31,0:31:87.20:0,87,926	0/0:27,0:27:78.20:0,78,838	0/0:16,0:16:39.10:0,39,418	0/0:19,0:19:57.14:0,57,612	0/0:19,0:19:57.14:0,57,612	0/0:19,0:19:48.12:0,48,515	0/0:27,0:26:78.20:0,78,838	0/0:27,0:27:75.15:0,75,789	1/1:3,28:31:81.26:1065,81,0	0/0:16,0:16:39.09:0,39,419	0/0:23,0:23:60.13:0,60,636	0/0:23,0:23:63.15:0,63,677	0/0:29,0:29:84.21:0,84,903	0/0:30,0:30:81.20:0,81,869	0/0:32,0:32:81.20:0,81,870	0/0:29,0:29:87.22:0,87,935	0/0:34,0:34:96.24:0,96,1031	0/0:20,0:20:60.15:0,60,645	0/0:29,0:28:84.17:0,84,883	0/0:2,0:2:6.02:0,6,64
chr10	26050281	.	A	AT	1509.01	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-9.770;DP=642;FS=0.545;HRun=7;HaplotypeScore=59.0151;InbreedingCoeff=0.9829;MQ=79.82;MQ0=0;MQRankSum=-1.589;QD=26.95;ReadPosRankSum=-2.749;VQSLOD=3.1897;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:58:99:0,162,1535	0/0:14,0:14:29.98:0,30,273	0/0:17,0:18:35.07:0,35,370	0/0:15,0:15:13.61:0,14,191	0/0:28,0:28:78.12:0,78,748	0/0:28,0:27:78.12:0,78,753	0/0:9,0:9:24.04:0,24,232	1/1:4,33:37:99:1159,99,0	0/0:15,0:15:36.06:0,36,347	0/0:34,0:34:93.13:0,93,888	0/0:18,0:18:54.09:0,54,521	0/0:21,0:21:60.08:0,60,569	0/0:27,0:27:69.07:0,69,658	0/0:15,0:15:39.06:0,39,376	0/0:26,0:26:78.13:0,78,753	0/0:25,0:25:69.11:0,69,666	1/1:0,19:19:39.12:471,39,0	0/0:19,0:19:57.09:0,57,550	0/0:20,0:20:54.06:0,54,514	0/0:28,0:28:78.06:0,78,737	0/0:13,0:13:36.05:0,36,348	0/0:30,0:30:84.09:0,84,800	0/0:30,0:30:84.13:0,84,810	0/0:11,0:11:29.64:0,30,289	0/0:19,0:19:48.08:0,48,463	0/0:29,0:29:75.11:0,75,724	0/0:29,0:29:84.14:0,84,811	0/0:7,0:7:18.03:0,18,173
chr10	26052749	.	GTGTA	G	1328.22	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.610;DP=621;FS=11.369;HRun=0;HaplotypeScore=109.2724;InbreedingCoeff=0.9929;MQ=74.41;MQ0=0;MQRankSum=-6.970;QD=39.07;ReadPosRankSum=-2.473;VQSLOD=3.0405;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:60.18:0,60,1487	0/0:12,0:12:36.12:0,36,978	0/0:26,0:23:25.43:0,25,992	0/0:24,0:24:52.70:0,53,1211	0/0:29,0:29:87.27:0,87,2241	0/0:41,0:41:99:0,117,2888	0/0:23,0:23:69.22:0,69,1810	1/1:2,22:24:66.14:1114,66,0	0/0:21,0:21:63.20:0,63,1641	0/0:27,0:27:81.26:0,81,1997	0/0:27,0:25:78.24:0,78,1946	0/0:23,0:23:69.22:0,69,1720	0/0:15,0:15:45.15:0,45,1223	0/0:15,0:15:45.12:0,45,1056	0/0:26,0:26:75.26:0,75,1506	0/0:27,0:27:81.21:0,81,1874	1/1:2,8:10:21.06:335,21,0	0/0:12,0:12:36.04:0,36,803	0/0:17,0:17:51.13:0,51,1235	0/0:22,0:22:66.23:0,66,1730	0/0:20,0:20:60.16:0,60,1390	0/0:32,0:32:96.30:0,96,2486	0/0:28,0:28:84.25:0,84,2111	0/0:17,0:17:51.18:0,51,1392	0/0:32,0:32:96.20:0,96,2233	0/0:19,0:19:55.05:0,55,1292	0/0:24,0:24:72.23:0,72,1803	0/0:6,0:6:18.06:0,18,491
chr10	26052752	.	TA	T	311.89	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.828;DP=626;FS=11.167;HRun=1;HaplotypeScore=75.2169;InbreedingCoeff=0.9929;MQ=74.40;MQ0=0;MQRankSum=-8.462;QD=9.17;ReadPosRankSum=-1.249;VQSLOD=-0.2497;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:60.15:0,60,881	0/0:12,0:12:36.12:0,36,572	0/0:24,1:22:56.82:0,57,717	0/0:24,0:24:59.31:0,59,794	0/0:29,0:29:87.27:0,87,1332	0/0:39,0:39:99:0,111,1718	0/0:25,0:25:75.23:0,75,1141	1/1:23,1:24:59.65:319,60,0	0/0:23,0:23:69.21:0,69,1049	0/0:26,0:26:78.23:0,78,1159	0/0:29,0:27:87.26:0,87,1312	0/0:24,0:24:72.17:0,72,1086	0/0:18,0:18:51.12:0,51,734	0/0:14,0:14:42.12:0,42,622	0/0:28,0:28:77.82:0,78,664	0/0:25,0:25:75.22:0,75,1146	1/1:8,2:10:19.71:113,20,0	0/0:12,0:12:36.12:0,36,562	0/0:17,0:17:48.14:0,48,703	0/0:24,0:24:69.16:0,69,979	0/0:21,0:21:60.08:0,60,845	0/0:32,0:32:96.28:0,96,1436	0/0:29,0:29:84.27:0,84,1305	0/0:18,0:18:54.18:0,54,856	0/0:32,0:32:93.23:0,93,1340	0/0:17,0:17:48.14:0,48,704	0/0:21,0:21:63.17:0,63,932	0/0:6,0:6:18.06:0,18,286
chr10	26052753	.	A	AG	736.09	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-4.964;DP=629;FS=2.613;HRun=8;HaplotypeScore=78.6696;InbreedingCoeff=0.9729;MQ=74.22;MQ0=0;MQRankSum=-0.230;QD=27.26;ReadPosRankSum=0.418;VQSLOD=4.2031;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:49.75:0,50,464	0/0:13,0:13:36.01:0,36,330	0/0:23,0:21:33.60:0,34,370	0/0:23,1:24:22.90:0,23,374	0/0:29,0:29:81.02:0,81,737	0/0:39,0:39:99:0,105,956	0/0:24,0:24:69.04:0,69,630	0/0:29,0:29:40.49:0,40,121	0/0:23,0:23:66.02:0,66,600	0/0:26,0:26:65.95:0,66,587	0/0:30,0:28:81.03:0,81,737	0/0:24,0:24:64.59:0,65,581	0/0:18,0:18:44.96:0,45,397	0/0:14,0:14:36.02:0,36,329	1/1:2,25:27:72.21:831,72,0	0/0:25,0:25:69.04:0,69,631	0/0:10,0:10:14.95:0,15,46	0/0:12,0:12:36.02:0,36,329	0/0:17,0:17:36.01:0,36,329	0/0:24,0:24:54.01:0,54,494	0/0:20,0:20:38.99:0,39,357	0/0:31,0:31:84.01:0,84,759	0/0:29,0:29:81.04:0,81,741	0/0:18,0:18:54.03:0,54,494	0/0:31,1:32:43.42:0,43,651	0/0:17,0:17:39.02:0,39,357	0/0:21,0:21:54.03:0,54,494	0/0:6,0:6:18.01:0,18,165
chr10	26052762	.	AG	A	701.08	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.672;DP=626;FS=9.454;HRun=8;HaplotypeScore=75.0965;InbreedingCoeff=0.9945;MQ=79.44;MQ0=0;MQRankSum=-6.957;QD=17.10;ReadPosRankSum=-3.821;VQSLOD=2.1674;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:66.22:0,66,904	0/0:14,0:14:42.14:0,42,586	0/0:29,0:26:63.21:0,63,854	0/0:25,0:25:45.66:0,46,707	0/0:31,0:31:93.31:0,93,1291	0/0:38,0:38:99:0,111,1551	0/0:26,0:26:75.20:0,75,993	1/1:12,18:30:78.95:636,79,0	0/0:22,0:22:66.21:0,66,906	0/0:25,0:25:69.22:0,69,941	0/0:29,0:27:87.29:0,87,1214	0/0:23,0:23:63.20:0,63,862	0/0:18,0:18:51.15:0,51,686	0/0:16,0:16:48.15:0,48,649	0/0:26,0:26:75.21:0,75,971	0/0:24,0:24:66.21:0,66,907	1/1:5,6:11:23.36:186,23,0	0/0:12,0:12:36.10:0,36,484	0/0:17,0:17:48.12:0,48,634	0/0:21,0:21:63.21:0,63,879	0/0:15,0:15:45.14:0,45,612	0/0:29,0:29:78.26:0,78,1088	0/0:31,0:31:90.30:0,90,1256	0/0:20,0:20:57.19:0,57,796	0/0:28,0:28:84.26:0,84,1147	0/0:17,0:17:48.16:0,48,667	0/0:19,0:19:57.19:0,57,796	0/0:6,0:6:18.06:0,18,252
chr10	26053092	.	A	AT	947.26	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.872;DP=637;FS=16.890;HRun=9;HaplotypeScore=65.6379;InbreedingCoeff=0.9936;MQ=84.03;MQ0=0;MQRankSum=-1.836;QD=22.55;ReadPosRankSum=-3.958;VQSLOD=1.5911;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:41.98:0,42,365	0/0:12,0:12:29.99:0,30,260	0/0:19,0:20:21.74:0,22,272	0/0:20,0:20:47.97:0,48,415	0/0:34,0:34:98.96:0,99,856	0/0:31,0:31:86.92:0,87,743	0/0:8,0:8:24:0,24,208	1/1:6,25:31:72.62:770,73,0	0/0:29,0:29:74.94:0,75,647	0/0:31,0:32:83.01:0,83,709	0/0:30,0:30:77.96:0,78,677	0/0:29,0:29:77.98:0,78,677	0/0:30,0:30:77.93:0,78,668	0/0:28,0:28:71.96:0,72,621	0/0:2,0:21:38.70:0,39,114	0/0:22,0:22:53.98:0,54,469	1/1:2,9:11:27.07:299,27,0	0/0:11,0:11:26.98:0,27,234	0/0:21,0:23:55.05:0,55,455	0/0:23,0:23:62.97:0,63,543	0/0:21,0:21:50.96:0,51,439	0/0:19,0:19:47.03:0,47,397	0/0:33,0:33:95.98:0,96,833	0/0:9,0:9:20.99:0,21,182	0/0:17,0:16:47.96:0,48,412	0/0:22,0:22:44.97:0,45,391	0/0:30,0:30:80.96:0,81,699	0/0:23,0:23:59.97:0,60,521
chr10	26054920	.	TTCAC	T	129.19	PASS	AB=0.719;AC=1;AF=0.018;AN=56;BaseQRankSum=5.801;DP=420;FS=7.126;HRun=0;HaplotypeScore=72.7308;InbreedingCoeff=-0.0231;MQ=68.25;MQ0=1;MQRankSum=-4.101;QD=3.15;ReadPosRankSum=-3.926;VQSLOD=-0.3001;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:66.21:0,66,1800	0/0:3,0:3:9.03:0,9,218	0/0:21,0:16:47.83:0,48,1138	0/0:9,0:8:9.83:0,10,323	0/0:14,0:14:42.06:0,42,965	0/0:18,0:18:54.15:0,54,1318	0/0:12,0:12:33.10:0,33,882	0/1:25,16:40:99:204,0,1506	0/0:6,0:6:18.06:0,18,486	0/0:18,0:18:54.19:0,54,1553	0/0:15,0:15:45.15:0,45,1265	0/0:12,0:12:36.12:0,36,924	0/0:21,0:21:60.18:0,60,1570	0/0:10,0:10:30.09:0,30,759	0/0:22,0:22:66.19:0,66,1558	0/0:14,0:14:42.13:0,42,1151	0/0:14,0:14:32.85:0,33,434	0/0:8,0:8:23.98:0,24,550	0/0:15,0:15:45.13:0,45,1051	0/0:14,0:14:42.14:0,42,1180	0/0:10,0:10:30.07:0,30,706	0/0:5,0:5:15.05:0,15,434	0/0:17,0:17:51.16:0,51,1387	0/0:7,0:7:21.07:0,21,571	0/0:23,0:23:69.22:0,69,1911	0/0:13,0:13:39.12:0,39,1029	0/0:23,0:23:69.21:0,69,1725	0/0:12,0:12:36.12:0,36,1010
chr10	26055889	.	C	CT	843.61	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.132;DP=677;FS=10.217;HRun=2;HaplotypeScore=73.0351;InbreedingCoeff=0.9830;MQ=85.25;MQ0=0;MQRankSum=-7.479;QD=21.09;ReadPosRankSum=-2.156;VQSLOD=2.0918;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:72.17:0,72,849	0/0:15,0:15:42.09:0,42,502	0/0:27,0:27:67.68:0,68,753	0/0:19,0:18:45:0,45,485	0/0:32,0:32:81.24:0,81,992	0/0:33,0:33:96.29:0,96,1177	0/0:18,0:18:54.14:0,54,642	1/1:5,22:27:51.13:709,51,0	0/0:25,0:25:75.18:0,75,899	0/0:25,0:25:75.22:0,75,910	0/0:29,0:29:81.24:0,81,990	0/0:32,0:32:87.24:0,87,1052	0/0:30,0:30:87.27:0,87,1078	0/0:28,0:28:77.89:0,78,915	0/0:35,0:35:99:0,105,1276	0/0:30,0:30:87.22:0,87,1038	1/1:3,10:13:14.99:253,15,0	0/0:10,0:10:27.08:0,27,332	0/0:7,0:7:15.05:0,15,186	0/0:37,0:37:99:0,111,1334	0/0:30,0:30:81.21:0,81,976	0/0:20,0:20:54.15:0,54,656	0/0:26,0:26:75.23:0,75,918	0/0:19,0:19:57.14:0,57,668	0/0:13,0:13:39.12:0,39,483	0/0:22,0:22:66.21:0,66,818	0/0:30,0:30:84.25:0,84,1025	0/0:21,0:21:63.16:0,63,751
chr10	26056329	.	GTA	G	1005.51	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.993;DP=659;FS=6.468;HRun=0;HaplotypeScore=85.3025;InbreedingCoeff=0.9274;MQ=78.52;MQ0=0;MQRankSum=-5.150;QD=32.44;ReadPosRankSum=-3.035;VQSLOD=4.9157;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:69.19:0,69,1352	0/0:12,0:12:36.12:0,36,731	0/0:16,0:16:44.52:0,45,840	0/0:14,0:14:42.11:0,42,696	0/0:30,0:30:90.31:0,90,1813	0/0:31,0:31:93.32:0,93,1862	0/0:25,0:25:75.26:0,75,1484	1/1:0,24:24:69.18:1020,69,0	0/0:27,0:27:81.28:0,81,1610	0/0:23,0:23:69.20:0,69,1303	0/0:28,0:28:84.27:0,84,1658	0/0:31,0:31:93.32:0,93,1889	0/0:28,0:28:84.27:0,84,1621	0/0:27,0:27:78.27:0,78,1569	0/0:26,0:26:78.27:0,78,1567	0/0:38,0:38:99:0,114,2292	1/1:0,7:7:6.02:97,6,0	0/0:5,0:5:12.04:0,12,244	0/0:20,0:20:60.21:0,60,1208	0/0:27,0:27:81.26:0,81,1594	0/0:39,0:39:99:0,117,2342	0/0:27,0:27:78.27:0,78,1573	0/0:17,0:17:51.18:0,51,1036	0/0:27,0:27:81.28:0,81,1645	0/0:21,0:21:63.22:0,63,1280	0/0:24,0:24:72.22:0,72,1390	0/0:33,0:33:99:0,99,1979	0/0:9,0:9:27.09:0,27,549
chr10	26056928	.	A	AT	1902.15	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-6.625;DP=596;FS=3.354;HRun=4;HaplotypeScore=59.3528;InbreedingCoeff=0.9682;MQ=71.70;MQ0=0;MQRankSum=-3.458;QD=32.24;ReadPosRankSum=-3.439;VQSLOD=2.7551;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:45.13:0,45,510	0/0:11,0:11:27.08:0,27,306	0/0:16,0:16:33.09:0,33,368	0/0:4,0:4:9.03:0,9,102	0/0:28,0:28:78.22:0,78,884	0/0:22,0:22:60.17:0,60,680	0/0:15,0:15:42.12:0,42,476	1/1:3,41:44:99:1614,123,0	0/0:22,0:21:60.17:0,60,680	0/0:31,0:31:93.26:0,93,1053	0/0:27,0:27:75.20:0,75,841	0/0:13,0:13:36.09:0,36,398	0/0:23,0:23:63.18:0,63,714	0/0:16,0:16:42.12:0,42,476	0/0:21,0:21:60.17:0,60,680	0/0:20,0:20:57.15:0,57,637	1/1:0,15:15:30.10:410,30,0	0/0:9,0:9:22.30:0,22,238	0/0:17,0:17:39.09:0,39,433	0/0:33,0:33:96.26:0,96,1078	0/0:12,0:12:36.10:0,36,408	0/0:16,0:16:36.10:0,36,408	0/0:28,0:28:81.19:0,81,904	0/0:21,0:21:63.14:0,63,691	0/0:32,0:32:87.23:0,87,978	0/0:21,0:21:63.17:0,63,707	0/0:37,0:37:99:0,99,1102	0/0:19,0:19:57.14:0,57,635
chr10	26056975	.	CTG	C	95.88	PASS	AB=0.632;AC=2;AF=0.036;AN=56;BaseQRankSum=5.104;DP=629;FS=21.066;HRun=0;HaplotypeScore=90.3757;InbreedingCoeff=0.3176;MQ=78.96;MQ0=5;MQRankSum=-4.049;QD=3.31;ReadPosRankSum=-3.044;VQSLOD=-0.3979;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:57.20:0,57,1097	0/0:9,0:9:24.07:0,24,431	0/0:42,0:33:89.17:0,89,1367	0/0:38,1:28:48.81:0,49,1008	0/0:19,0:19:54.19:0,54,1042	0/0:26,0:26:69.22:0,69,1267	0/0:15,0:15:42.12:0,42,794	0/1:18,8:21:19.32:170,0,19	0/0:28,0:27:75.26:0,75,1403	0/0:29,0:29:84.29:0,84,1608	0/0:25,0:25:72.23:0,72,1310	0/0:16,0:16:45.14:0,45,790	0/0:25,0:25:63.22:0,63,1171	0/0:22,0:22:66.23:0,66,1228	0/0:19,0:19:54.17:0,54,978	0/0:19,0:19:51.17:0,51,984	0/1:0,3:3:0:0,0,0	0/0:14,0:13:36.12:0,36,617	0/0:21,0:19:54.19:0,54,1029	0/0:24,0:24:72.22:0,72,1296	0/0:18,0:18:51.13:0,51,931	0/0:9,0:9:27.08:0,27,488	0/0:32,0:32:93.24:0,93,1706	0/0:24,0:24:60.21:0,60,1142	0/0:27,0:27:78.24:0,78,1378	0/0:25,0:25:75.25:0,75,1386	0/0:28,0:28:84.29:0,84,1603	0/0:21,0:21:60.20:0,60,1081
chr10	26056979	.	CTG	C	55.66	PASS	AB=0.725;AC=2;AF=0.036;AN=56;BaseQRankSum=4.813;DP=628;FS=21.443;HRun=0;HaplotypeScore=91.3716;InbreedingCoeff=0.3058;MQ=76.49;MQ0=6;MQRankSum=-3.416;QD=1.59;ReadPosRankSum=-2.386;VQSLOD=0.0437;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:57.20:0,57,1096	0/0:8,0:8:24.01:0,24,423	0/0:46,0:32:86.18:0,86,1358	0/0:43,0:28:49.35:0,49,942	0/0:20,0:20:57.20:0,57,1099	0/0:23,0:23:60.21:0,60,1157	0/0:17,0:17:48.14:0,48,915	0/1:21,8:24:27.99:130,0,28	0/0:28,0:27:72.25:0,72,1338	0/0:30,0:30:87.29:0,87,1648	0/0:23,0:23:69.22:0,69,1298	0/0:14,0:14:39.13:0,39,736	0/0:22,0:22:63.19:0,63,1163	0/0:22,0:22:66.19:0,66,1198	0/0:20,0:20:54.17:0,54,996	0/0:21,0:21:57.20:0,57,1080	0/1:3,3:6:0.04:0,0,0	0/0:14,0:13:32.15:0,32,512	0/0:20,0:18:54.18:0,54,1024	0/0:21,0:21:63.18:0,63,1147	0/0:18,0:18:48.16:0,48,924	0/0:9,0:9:27.09:0,27,513	0/0:29,0:29:84.29:0,84,1621	0/0:23,0:23:57.20:0,57,1100	0/0:24,0:24:66.21:0,66,1241	0/0:26,0:26:78.13:0,78,1428	0/0:29,0:29:84.29:0,84,1611	0/0:22,0:22:54.16:0,54,990
chr10	26057028	.	TCTGC	T	569.93	PASS	AB=0.754;AC=1;AF=0.018;AN=56;BaseQRankSum=6.553;DP=716;FS=13.713;HRun=0;HaplotypeScore=127.0015;InbreedingCoeff=-0.0236;MQ=51.49;MQ0=41;MQRankSum=-5.861;QD=11.63;ReadPosRankSum=-1.245;VQSLOD=1.7390;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:60.21:0,60,1461	0/0:7,0:7:15.05:0,15,403	0/0:47,0:7:11.45:0,11,208	0/0:77,0:11:8.26:0,8,125	0/0:21,0:20:51.17:0,51,1334	0/0:26,0:26:63.22:0,63,1642	0/0:25,0:21:26.43:0,26,1098	0/1:33,16:39:99:644,0,897	0/0:24,0:24:42.83:0,43,1644	0/0:29,0:29:75.24:0,75,1919	0/0:19,0:19:45.14:0,45,1135	0/0:20,0:17:34.25:0,34,1004	0/0:22,0:22:60.21:0,60,1565	0/0:16,0:16:48.16:0,48,1286	0/0:21,0:21:54.18:0,54,1369	0/0:30,0:30:81.28:0,81,2132	0/0:9,0:8:12.02:0,12,283	0/0:15,0:14:27.93:0,28,786	0/0:24,0:20:60.16:0,60,1516	0/0:14,0:14:36.12:0,36,940	0/0:25,0:23:48.16:0,48,1211	0/0:19,0:15:42.14:0,42,1126	0/0:25,0:24:63.22:0,63,1680	0/0:26,0:25:54.04:0,54,1463	0/0:22,0:22:60.21:0,60,1596	0/0:31,0:30:45.93:0,46,2104	0/0:24,0:23:63.21:0,63,1630	0/0:22,0:22:60.21:0,60,1600
chr10	26057045	.	G	GTC	655.24	PASS	AC=4;AF=0.077;AN=52;BaseQRankSum=1.976;DP=714;FS=0.000;HRun=0;HaplotypeScore=116.5630;InbreedingCoeff=0.9308;MQ=47.55;MQ0=43;MQRankSum=-2.904;QD=10.92;ReadPosRankSum=-1.363;VQSLOD=2.6557;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:30.09:0,30,378	0/0:6,0:6:11.45:0,11,106	0/0:30,0:6:6.67:0,7,59	./.	0/0:21,0:17:30.10:0,30,381	0/0:32,0:30:45.09:0,45,557	0/0:32,0:25:42:0,42,482	1/1:36,0:32:31.57:217,32,0	0/0:29,0:27:56.88:0,57,667	0/0:27,0:27:44.71:0,45,516	0/0:19,0:18:27.07:0,27,329	0/0:20,0:17:27.35:0,27,315	0/0:25,0:25:44.54:0,45,531	0/0:15,0:14:30.10:0,30,382	1/1:7,11:17:35.15:559,35,0	0/0:29,0:28:57.66:0,58,713	./.	0/0:16,0:14:26.41:0,26,296	0/0:27,0:23:34.34:0,34,481	0/0:19,0:17:18.06:0,18,229	0/0:27,0:22:39.12:0,39,492	0/0:24,0:19:30.10:0,30,382	0/0:27,0:25:51.14:0,51,631	0/0:24,0:22:42.13:0,42,534	0/0:22,0:22:39.12:0,39,495	0/0:38,0:35:65.25:0,65,775	0/0:29,0:26:44.76:0,45,571	0/0:23,0:21:51.04:0,51,584
chr10	26057055	.	CTG	C	54.51	PASS	AB=0.959;AC=5;AF=0.093;AN=54;BaseQRankSum=8.790;DP=671;FS=9.709;HRun=0;HaplotypeScore=120.1515;InbreedingCoeff=0.3434;MQ=45.75;MQ0=39;MQRankSum=-8.427;QD=0.66;ReadPosRankSum=-5.276;VQSLOD=-0.3092;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:30.05:0,30,539	0/1:6,0:6:6.76:7,0,118	0/0:17,0:4:5.72:0,6,76	0/0:35,0:3:0.05:0,0,1	0/0:24,0:19:30.06:0,30,509	0/0:28,0:26:45.54:0,46,698	0/0:32,0:24:34.29:0,34,616	1/1:32,0:24:27.76:143,28,0	0/0:31,0:29:37.19:0,37,830	0/0:27,0:27:27.80:0,28,821	0/0:21,0:20:26.98:0,27,467	0/1:18,1:16:9.13:9,0,394	0/1:23,2:25:2.01:2,0,679	0/0:15,0:13:30.10:0,30,577	0/0:17,0:16:33.20:0,33,261	0/0:31,0:29:41.64:0,42,1037	./.	0/0:16,0:14:1.07:0,1,407	0/0:23,0:20:4.63:0,5,593	0/0:24,0:22:18.06:0,18,337	0/0:28,0:22:39.03:0,39,643	0/0:22,0:18:30.09:0,30,544	0/0:29,0:27:51.06:0,51,795	0/0:24,0:22:41.96:0,42,741	0/0:26,0:26:39.08:0,39,672	0/0:38,0:35:20.69:0,21,1101	0/0:28,1:25:30.85:0,31,803	0/0:24,0:21:30.31:0,30,757
chr10	26057065	.	CTG	C	202.17	PASS	AB=0.892;AC=13;AF=0.241;AN=54;BaseQRankSum=8.809;DP=636;FS=14.684;HRun=0;HaplotypeScore=127.0316;InbreedingCoeff=-0.0928;MQ=43.52;MQ0=35;MQRankSum=-7.825;QD=0.71;ReadPosRankSum=-3.911;VQSLOD=0.2288;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,3:25:27.09:0,27,508	0/1:4,1:5:32.35:32,0,106	0/0:7,0:2:3.01:0,3,51	0/0:18,0:3:0.26:0,0,1	0/0:19,8:22:23.81:0,24,412	0/0:21,4:23:30.54:0,31,482	0/1:23,4:19:10.54:11,0,532	1/1:24,0:16:10.11:35,10,0	0/1:22,6:26:18.56:19,0,600	0/1:27,2:28:76.53:77,0,750	0/0:20,3:22:17.95:0,18,329	0/1:18,1:16:34.79:35,0,359	0/1:18,5:22:27.02:27,0,501	0/0:15,2:15:30.10:0,30,555	0/0:23,0:22:37.48:0,37,389	0/1:25,6:30:2.67:3,0,899	./.	0/1:15,1:14:33.03:33,0,374	0/1:23,1:21:3.74:4,0,547	0/0:22,6:25:14.85:0,15,246	0/0:25,0:19:30.09:0,30,532	0/0:17,5:18:27.09:0,27,508	0/0:24,2:24:33.10:0,33,590	0/0:19,3:20:35.97:0,36,687	0/0:24,3:27:30.08:0,30,513	0/1:29,4:30:18.77:19,0,1048	0/0:24,4:24:20.58:0,21,615	0/1:24,1:21:55.19:55,0,568
chr10	26057075	.	CTCTG	C	189.72	PASS	AB=0.959;AC=10;AF=0.192;AN=52;BaseQRankSum=8.765;DP=636;FS=14.213;HRun=0;HaplotypeScore=169.3903;InbreedingCoeff=0.0120;MQ=40.52;MQ0=31;MQRankSum=-4.649;QD=0.89;ReadPosRankSum=-4.505;VQSLOD=0.0038;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:14.45:0,14,524	0/0:7,0:7:4.11:0,4,115	./.	./.	0/0:30,0:25:14.95:0,15,322	0/0:23,0:21:11.63:0,12,292	0/0:28,0:20:20.93:0,21,597	1/1:15,1:10:8.94:78,9,0	0/0:31,0:29:1.40:0,1,605	0/0:25,0:24:6.02:0,6,869	0/0:24,0:22:17.63:0,18,270	0/1:24,0:21:34.91:35,0,286	0/1:27,0:26:20.14:20,0,462	0/0:19,0:17:20.68:0,21,500	0/0:22,0:21:27.26:0,27,509	0/1:38,0:36:8.36:8,0,842	0/1:5,3:7:0:0,0,0	0/1:15,1:14:48.42:48,0,370	0/0:21,0:18:10.44:0,10,630	0/0:29,0:26:9.15:0,9,175	0/0:27,0:21:30:0,30,565	0/0:23,0:19:24.08:0,24,512	0/0:29,0:26:30.09:0,30,615	0/0:25,0:23:35.64:0,36,773	0/0:27,0:27:21.87:0,22,417	0/1:31,0:28:55.53:56,0,1042	0/1:30,0:26:54.12:54,0,439	0/1:22,0:19:24.57:25,0,594
chr10	26057083	.	CTG	C	1018.60	PASS	AB=0.892;AC=20;AF=0.385;AN=52;BaseQRankSum=9.527;DP=627;FS=19.904;HRun=0;HaplotypeScore=163.9704;InbreedingCoeff=-0.4911;MQ=40.55;MQ0=28;MQRankSum=-2.296;QD=2.34;ReadPosRankSum=-3.171;VQSLOD=0.6366;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:17,14:31:10.95:11,0,192	0/1:7,0:7:13.41:13,0,33	./.	./.	0/0:23,8:26:14.71:0,15,120	0/1:15,5:18:23.83:24,0,61	0/0:26,2:20:3.01:0,3,207	1/1:16,0:7:1.65:5,2,0	0/1:24,10:32:99:259,0,177	0/1:25,1:25:24.09:24,0,266	0/1:19,3:20:32.46:32,0,62	0/1:15,10:22:67.32:70,0,67	0/1:24,5:28:71.82:72,0,122	0/1:20,1:19:39.82:40,0,165	0/0:22,0:21:0.45:0,0,112	0/1:28,5:31:99:167,0,255	0/1:8,0:7:0:0,0,0	0/1:15,0:13:18.21:18,0,121	0/1:17,0:15:9.73:10,0,140	0/0:21,7:26:8.92:0,9,53	0/0:28,0:22:9.56:0,10,176	0/1:19,3:18:6.84:7,0,170	0/0:27,1:24:23.95:0,24,195	0/0:24,2:24:13.73:0,14,264	0/1:25,3:28:36.32:36,0,122	0/1:30,3:30:99:142,0,330	0/1:25,5:26:99:184,0,111	0/1:19,0:17:44.78:45,0,148
chr10	26057091	.	C	CTCTCTCTG	586.53	PASS	AB=1.000;AC=17;AF=0.327;AN=52;BaseQRankSum=5.618;DP=643;FS=2.526;HRun=0;HaplotypeScore=224.4706;InbreedingCoeff=-0.2814;MQ=41.01;MQ0=27;MQRankSum=-2.985;QD=1.46;ReadPosRankSum=4.366;VQSLOD=2.4514;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:5.68:0,6,109	0/1:7,0:7:3.40:3,0,21	./.	./.	0/0:33,0:28:9.26:0,9,72	0/1:18,0:16:5.19:5,0,16	0/1:25,0:17:14.31:14,0,100	0/0:19,0:12:24.90:0,25,164	0/1:36,0:34:17.70:18,0,128	0/1:22,0:21:57.57:58,0,170	0/0:21,0:19:5.86:0,6,36	0/1:25,0:22:0.53:1,0,106	0/1:28,0:27:37.23:37,0,106	0/0:22,0:20:10.98:0,11,159	1/1:10,13:28:19.88:227,20,0	0/1:35,0:33:31.85:32,0,157	0/0:9,0:8:1.28:0,1,3	0/1:16,0:14:35.83:62,0,36	0/1:20,0:18:30.97:31,0,93	0/0:30,0:28:9.01:0,9,71	0/0:27,0:22:6.99:0,7,140	0/1:25,0:21:7.23:7,0,140	0/0:27,0:23:17.90:0,18,137	0/0:21,0:19:13.09:0,13,101	0/1:31,0:31:19.20:19,0,112	0/1:33,0:30:99:167,0,206	0/1:33,0:29:44.72:45,0,165	0/1:18,0:16:4.76:5,0,141
chr10	26057117	.	CTGTG	C	9341.09	PASS	AB=0.647;AC=45;AF=0.804;AN=56;BaseQRankSum=-3.729;DP=681;FS=47.417;HRun=0;HaplotypeScore=169.4951;InbreedingCoeff=0.8967;MQ=45.15;MQ0=16;MQRankSum=5.318;QD=16.74;ReadPosRankSum=4.724;VQSLOD=2.7261;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:31,1:32:14.28:184,14,0	1/1:7,1:8:11.94:140,12,0	0/0:19,0:11:33.11:0,33,583	0/0:20,0:13:37.59:0,38,617	1/1:30,0:26:24.29:353,24,0	1/1:18,0:17:17.98:254,18,0	1/1:19,2:18:29.97:443,30,0	0/0:40,0:36:74.74:0,75,744	1/1:29,2:29:44.88:533,45,0	1/1:23,1:22:41:581,41,0	1/1:20,1:20:14.08:279,14,0	1/1:25,0:25:35.39:500,35,0	1/1:29,1:30:46.90:600,47,0	1/1:25,1:24:44.95:597,45,0	0/0:33,0:32:13.45:0,13,121	1/1:30,2:30:53.81:643,54,0	0/0:11,0:11:4.82:0,5,36	1/1:13,0:11:12.95:110,13,0	1/1:12,13:22:40.56:547,41,0	1/1:31,1:30:29.82:437,30,0	1/1:20,0:17:15.05:242,15,0	1/1:24,0:20:41.77:562,42,0	0/1:10,12:19:0:0,0,0	1/1:18,1:18:15.26:231,15,0	1/1:29,1:30:38.04:557,38,0	1/1:29,0:26:53.70:626,54,0	1/1:28,2:27:35.50:546,36,0	1/1:14,1:14:16.70:375,17,0
chr10	26057390	.	A	ATGACTTGGCTTCC	5472.89	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=2.355;DP=688;FS=29.241;HRun=0;HaplotypeScore=238.2822;InbreedingCoeff=0.9988;MQ=80.84;MQ0=0;MQRankSum=-8.938;QD=124.38;ReadPosRankSum=-2.136;VQSLOD=3.3498;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,99,3702	0/0:8,0:8:24.08:0,24,916	0/0:31,0:30:87.30:0,87,3304	0/0:23,0:23:57.15:0,57,1750	0/0:31,0:31:72.22:0,72,2585	0/0:27,0:27:75.26:0,75,2876	0/0:25,0:25:66.23:0,66,2453	1/1:19,7:25:66.21:3473,66,0	0/0:27,0:27:78.27:0,78,3001	0/0:21,0:21:54.18:0,54,2037	0/0:26,0:26:72.25:0,72,2874	0/0:21,0:21:63.22:0,63,2314	0/0:22,0:22:63.20:0,63,2238	0/0:26,0:26:75.26:0,75,2842	0/0:35,0:35:99:0,102,3645	0/0:31,0:31:87.30:0,87,3267	1/1:9,5:16:36.12:2000,36,0	0/0:16,0:16:42.14:0,42,1630	0/0:20,0:20:60.20:0,60,2121	0/0:30,0:30:72.25:0,72,2576	0/0:33,0:33:96.31:0,96,3309	0/0:27,0:27:75.24:0,75,2608	0/0:17,0:17:36.12:0,36,1401	0/0:31,0:31:87.16:0,87,3468	0/0:17,0:17:48.16:0,48,1750	0/0:22,0:22:66.22:0,66,2188	0/0:24,0:24:72.23:0,72,2721	0/0:17,0:17:45.10:0,45,1525
chr10	26057679	.	ACT	A	1820.86	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.498;DP=620;FS=1.216;HRun=0;HaplotypeScore=94.4672;InbreedingCoeff=0.9993;MQ=80.60;MQ0=0;MQRankSum=-2.061;QD=36.42;ReadPosRankSum=0.229;VQSLOD=5.4869;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:96.33:0,96,1781	0/0:11,0:11:33.11:0,33,610	0/0:23,0:23:69.23:0,69,1232	0/0:25,0:25:75.21:0,75,1273	0/0:28,0:28:81.28:0,81,1517	0/0:34,0:34:99:0,102,1877	0/0:25,0:25:72.22:0,72,1285	1/1:2,27:27:69.23:1015,69,0	0/0:13,0:13:33.11:0,33,618	0/0:31,0:31:90.31:0,90,1682	0/0:20,0:20:57.20:0,57,1068	0/0:22,0:22:66.23:0,66,1216	0/0:17,0:17:51.17:0,51,947	0/0:29,0:29:84.29:0,84,1573	0/0:26,0:26:78.27:0,78,1454	0/0:23,0:23:69.24:0,69,1285	1/1:0,21:21:63.21:927,63,0	0/0:19,0:19:45.15:0,45,831	0/0:10,0:10:30.09:0,30,533	0/0:22,0:22:63.22:0,63,1173	0/0:15,0:15:45.15:0,45,821	0/0:24,0:24:72.24:0,72,1311	0/0:16,0:16:48.16:0,48,891	0/0:17,0:17:51.17:0,51,955	0/0:23,0:23:69.24:0,69,1293	0/0:24,0:24:69.22:0,69,1251	0/0:30,0:30:87.30:0,87,1628	0/0:11,0:11:33.11:0,33,618
chr10	26057962	.	T	TC	449.61	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.017;DP=538;FS=43.164;HRun=4;HaplotypeScore=48.3622;InbreedingCoeff=0.9126;MQ=55.64;MQ0=16;MQRankSum=-5.631;QD=14.05;ReadPosRankSum=-2.217;VQSLOD=0.1380;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:63.14:0,63,699	0/0:11,0:11:30.09:0,30,340	0/0:13,0:4:6.01:0,6,62	0/0:17,0:5:9.02:0,9,102	0/0:24,0:24:69.20:0,69,782	0/0:25,0:25:69.15:0,69,754	0/0:14,0:14:39.08:0,39,421	1/1:13,11:21:27.09:363,27,0	0/0:18,0:18:51.14:0,51,571	0/0:25,0:25:65.90:0,66,714	0/0:15,0:15:39.11:0,39,442	0/0:18,0:18:45.13:0,45,510	0/0:17,0:17:48.12:0,48,535	0/0:24,0:24:69.20:0,69,781	0/0:20,0:20:57.15:0,57,639	0/0:21,0:21:54.14:0,54,604	1/1:0,8:8:15.05:205,15,0	0/0:18,0:18:48.14:0,48,544	0/0:19,0:14:42.10:0,42,461	0/0:21,0:21:54.15:0,54,612	0/0:20,0:20:60.16:0,60,669	0/0:19,0:19:54.15:0,54,613	0/0:17,0:17:42.10:0,42,467	0/0:16,0:16:42.09:0,42,457	0/0:25,0:25:66.17:0,66,732	0/0:15,0:15:45.12:0,45,503	0/0:26,0:25:72.20:0,72,816	0/0:25,0:25:57.11:0,57,615
chr10	26057986	.	TA	T	768.83	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.009;DP=576;FS=47.816;HRun=4;HaplotypeScore=56.6548;InbreedingCoeff=0.9907;MQ=61.60;MQ0=8;MQRankSum=-6.452;QD=22.61;ReadPosRankSum=-2.523;VQSLOD=-0.0170;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:54.17:0,54,727	0/0:8,0:8:24.08:0,24,336	0/0:19,0:14:42.12:0,42,569	0/0:21,0:16:48.12:0,48,631	0/0:23,0:23:69.16:0,69,897	0/0:23,0:23:69.17:0,69,926	0/0:21,0:21:60.20:0,60,833	1/1:2,22:21:60.18:719,60,0	0/0:19,0:19:57.17:0,57,767	0/0:22,0:22:57.19:0,57,798	0/0:15,0:15:45.12:0,45,581	0/0:19,0:19:57.18:0,57,779	0/0:21,0:21:60.19:0,60,823	0/0:28,0:28:84.24:0,84,1121	0/0:24,0:24:72.24:0,72,1007	0/0:19,0:19:57.19:0,57,798	1/1:1,9:10:15.03:168,15,0	0/0:23,0:23:63.11:0,63,801	0/0:20,0:16:48.16:0,48,672	0/0:21,0:21:63.17:0,63,856	0/0:24,0:24:69.23:0,69,966	0/0:20,0:20:54.17:0,54,740	0/0:20,0:20:57.18:0,57,780	0/0:22,0:22:60.19:0,60,824	0/0:23,0:23:69.21:0,69,933	0/0:17,0:17:45.02:0,45,573	0/0:29,0:28:81.25:0,81,1113	0/0:21,0:21:57.14:0,57,743
chr10	26058284	.	CT	C	388.92	PASS	AC=2;AF=0.037;AN=54;BaseQRankSum=6.488;DP=645;FS=0.971;HRun=2;HaplotypeScore=65.7940;InbreedingCoeff=0.8557;MQ=58.54;MQ0=4;MQRankSum=-2.192;QD=20.47;ReadPosRankSum=0.813;VQSLOD=3.5567;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,1:40:99:0,117,1720	0/0:11,0:11:33.11:0,33,495	0/0:17,1:5:12.04:0,12,174	0/0:20,1:9:5.87:0,6,202	0/0:39,0:39:99:0,117,1707	0/0:22,0:22:60.18:0,60,859	0/0:29,0:29:81.26:0,81,1193	./.	0/0:11,0:11:33.11:0,33,485	0/0:30,0:29:87.28:0,87,1279	0/0:21,0:21:60.20:0,60,898	0/0:19,0:19:54.18:0,54,809	0/0:26,0:26:72.23:0,72,1059	0/0:27,1:28:81.25:0,81,1174	0/0:22,1:23:66.22:0,66,988	0/0:16,3:19:12.36:0,12,662	1/1:3,16:18:38.55:483,39,0	0/0:19,0:19:57.19:0,57,849	0/0:26,0:22:57.19:0,57,833	0/0:23,0:23:69.23:0,69,1029	0/0:29,0:29:87.26:0,87,1257	0/0:21,0:21:63.21:0,63,944	0/0:28,0:28:84.27:0,84,1239	0/0:28,0:28:78.25:0,78,1126	0/0:20,0:20:60.20:0,60,894	0/0:21,0:21:63.21:0,63,927	0/0:27,1:28:78.26:0,78,1159	0/0:23,0:23:69.17:0,69,952
chr10	26058595	.	C	CCTT	459.86	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=5.466;DP=797;FS=1.131;HRun=0;HaplotypeScore=102.9922;InbreedingCoeff=0.7920;MQ=55.74;MQ0=15;MQRankSum=-5.552;QD=8.84;ReadPosRankSum=-1.176;VQSLOD=3.0953;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,2:42:93.30:0,93,1446	0/0:16,0:16:42.12:0,42,622	0/0:20,0:10:30.10:0,30,460	0/0:16,0:4:12.04:0,12,190	0/0:48,0:48:99:0,141,2231	0/0:24,0:24:63.18:0,63,953	0/0:30,0:27:50.94:0,51,808	1/1:5,10:11:15.04:288,15,0	0/0:25,0:25:69.24:0,69,1090	0/0:34,0:34:93.32:0,93,1474	0/0:19,0:19:48.16:0,48,761	0/0:28,1:28:72.13:0,72,1119	0/0:38,0:38:99:0,99,1569	0/0:40,2:42:99:0,111,1758	0/0:38,1:38:96.31:0,96,1500	0/0:30,0:30:84.29:0,84,1330	1/1:8,6:16:15.05:285,15,0	0/0:40,1:41:68.93:0,69,1383	0/0:25,0:18:48.15:0,48,735	0/0:21,0:21:51.16:0,51,780	0/0:34,0:34:78.27:0,78,1225	0/0:26,0:25:69.22:0,69,1070	0/0:27,0:27:72.25:0,72,1139	0/1:21,0:21:5.77:6,0,771	0/0:32,0:32:93.30:0,93,1448	0/0:34,0:34:96.33:0,96,1519	0/0:31,1:31:84.29:0,84,1328	0/0:17,0:17:48.16:0,48,754
chr10	26059166	.	T	TTGTGTGTGTGTGTGTGTGTG	17980.44	PASS	AB=1.000;AC=49;AF=0.875;AN=56;BaseQRankSum=-5.330;DP=694;FS=4.310;HRun=0;HaplotypeScore=322.8624;InbreedingCoeff=0.4343;MQ=47.55;MQ0=17;MQRankSum=1.745;QD=29.92;ReadPosRankSum=5.016;VQSLOD=2.9050;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:33,0:33:5.21:641,5,0	1/1:12,0:11:12.03:549,12,0	0/0:30,0:22:2.84:0,3,14	0/0:33,0:15:9.02:0,9,156	1/1:28,0:27:2.61:187,3,0	1/1:24,0:24:24.07:1134,24,0	1/1:27,0:26:11.97:483,12,0	0/0:28,0:21:12.29:0,12,80	1/1:21,0:20:13.46:317,13,0	1/1:25,0:23:36.10:1844,36,0	1/1:14,16:32:3.01:148,3,0	1/1:23,0:22:1.35:733,1,0	1/1:26,0:25:24.07:1153,24,0	1/1:21,0:19:27.09:1521,27,0	1/1:32,0:31:18.05:678,18,0	1/1:27,0:26:12.02:585,12,0	1/1:25,0:25:2.52:297,3,0	1/1:10,0:9:15.05:640,15,0	0/1:17,0:16:28.69:930,0,29	1/1:28,0:27:9.03:577,9,0	1/1:33,0:29:8.87:364,9,0	1/1:26,0:25:6.02:328,6,0	1/1:22,0:22:6.02:287,6,0	1/1:15,8:22:6.49:463,6,0	1/1:26,0:23:19.62:590,20,0	1/1:29,0:26:39.13:2107,39,0	1/1:25,0:22:30.60:1001,31,0	1/1:6,0:5:9.03:423,9,0
chr10	26059200	.	T	TG	844.40	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=3.496;DP=643;FS=1.693;HRun=1;HaplotypeScore=144.6805;InbreedingCoeff=0.9661;MQ=46.32;MQ0=22;MQRankSum=-3.011;QD=19.19;ReadPosRankSum=-0.552;VQSLOD=3.6166;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:31:50.93:0,51,636	0/0:11,0:10:23.99:0,24,309	0/0:44,0:29:78.19:0,78,1044	0/0:34,0:21:60.67:0,61,829	0/0:22,0:21:29.89:0,30,350	0/0:29,0:29:53.93:0,54,668	0/0:21,0:20:36.05:0,36,475	1/1:6,16:15:35.75:469,36,0	0/0:18,0:17:29.65:0,30,367	0/0:26,0:24:71.19:0,71,909	0/0:15,0:15:37.37:0,37,500	0/0:23,0:22:45.08:0,45,601	0/0:24,0:23:57.03:0,57,726	0/0:22,0:20:51.01:0,51,641	0/0:21,0:20:35.81:0,36,423	0/0:25,0:24:48.16:0,48,664	1/1:6,16:22:34.03:497,34,0	0/0:12,0:11:23.91:0,24,268	0/0:21,0:20:56.96:0,57,747	0/0:28,0:27:54.07:0,54,724	0/0:27,0:23:53.97:0,54,701	0/0:25,0:24:48.04:0,48,623	0/0:21,0:21:42.13:0,42,583	0/0:18,0:17:24.01:0,24,302	0/0:28,0:25:41.85:0,42,494	0/0:25,0:22:43.05:0,43,704	0/0:22,0:19:47.46:0,47,492	0/0:5,0:5:8.92:0,9,81
chr10	26059439	.	T	TTTTGGTGTA	838.95	PASS	AB=0.971;AC=5;AF=0.089;AN=56;BaseQRankSum=4.652;DP=644;FS=8.813;HRun=0;HaplotypeScore=177.1909;InbreedingCoeff=0.7391;MQ=68.49;MQ0=3;MQRankSum=-4.014;QD=14.46;ReadPosRankSum=-1.358;VQSLOD=1.6909;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:34:13.67:14,0,2670	0/0:11,0:11:33.11:0,33,1010	0/0:21,0:19:54.18:0,54,1603	0/0:28,0:27:75.17:0,75,1929	0/0:32,0:32:87.27:0,87,2542	0/0:35,0:35:99:0,105,3142	0/0:19,0:19:54.16:0,54,1542	1/1:9,5:5:9.03:336,9,0	0/0:22,0:22:66.23:0,66,1980	0/0:30,0:30:90.30:0,90,2619	0/0:27,0:27:81.23:0,81,2240	0/0:28,0:28:84.28:0,84,2447	0/0:27,0:27:78.27:0,78,2388	0/0:31,0:31:93.32:0,93,2729	0/0:29,0:29:87.27:0,87,2490	0/0:26,0:26:78.25:0,78,2216	1/1:6,4:9:15.01:608,15,0	0/0:26,0:26:27.64:0,28,1731	0/0:18,0:16:45.15:0,45,1334	0/0:17,0:17:51.18:0,51,1481	0/0:23,0:23:66.22:0,66,1936	0/0:20,0:20:54.18:0,54,1543	0/0:14,0:14:39.10:0,39,1057	0/0:23,0:23:69.24:0,69,2073	0/0:20,0:20:60.21:0,60,1830	0/0:29,0:29:84.28:0,84,2506	0/0:25,0:25:75.26:0,75,2233	0/0:5,0:5:12.04:0,12,367
chr10	26059818	.	A	AC	305.74	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.616;DP=752;FS=11.241;HRun=1;HaplotypeScore=75.7467;InbreedingCoeff=0.9803;MQ=67.50;MQ0=2;MQRankSum=-4.874;QD=13.90;ReadPosRankSum=-1.328;VQSLOD=1.4186;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,106,1507	0/0:7,0:7:21.07:0,21,273	0/0:21,0:20:32.38:0,32,615	0/0:14,0:14:40.36:0,40,488	0/0:22,0:22:63.19:0,63,803	0/0:25,0:25:69.20:0,69,880	0/0:25,0:25:69.21:0,69,878	1/1:3,8:10:14.75:196,15,0	0/0:35,0:35:99:0,105,1317	0/0:37,0:37:99:0,111,1424	0/0:24,0:24:72.23:0,72,933	0/0:24,0:24:66.20:0,66,840	0/0:35,0:35:99:0,105,1362	0/0:30,0:30:87.24:0,87,1086	0/0:45,0:45:99:0,135,1738	0/0:36,0:36:99:0,105,1350	1/1:0,11:11:15.05:224,15,0	0/0:28,0:28:84.27:0,84,1090	0/0:34,0:34:99:0,102,1288	0/0:27,0:27:81.26:0,81,1051	0/0:47,0:47:99:0,135,1739	0/0:24,0:24:72.23:0,72,935	0/0:19,0:19:57.19:0,57,740	0/0:38,0:38:99:0,111,1439	0/0:16,0:16:48.16:0,48,622	0/0:33,0:33:87.28:0,87,1130	0/0:29,0:29:87.28:0,87,1128	0/0:11,0:11:30.08:0,30,374
chr10	26059984	.	AC	A	1541.10	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.139;DP=808;FS=1.229;HRun=2;HaplotypeScore=84.3244;InbreedingCoeff=0.9528;MQ=62.82;MQ0=6;MQRankSum=0.330;QD=32.11;ReadPosRankSum=0.639;VQSLOD=3.4373;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,129,1918	0/0:9,0:9:27.08:0,27,385	0/0:27,0:23:66.21:0,66,938	0/0:23,1:16:9.89:0,10,439	0/0:28,0:28:84.28:0,84,1257	0/0:15,0:15:45.15:0,45,674	0/0:34,0:34:99:0,102,1516	0/0:34,0:30:87.24:0,87,1206	0/0:30,0:30:90.30:0,90,1345	0/0:29,0:29:87.29:0,87,1281	0/0:17,0:17:48.13:0,48,679	0/0:24,0:24:72.19:0,72,1035	0/0:32,0:32:96.31:0,96,1419	0/0:34,0:34:99:0,102,1507	1/1:0,48:48:99:1636,126,0	0/0:35,0:35:99:0,105,1570	0/0:27,0:27:45.11:0,45,642	0/0:24,0:24:72.24:0,72,1079	0/0:25,0:25:75.23:0,75,1101	0/0:24,0:24:72.24:0,72,1076	0/0:53,0:53:99:0,156,2244	0/0:27,0:27:81.27:0,81,1210	0/0:21,0:21:63.20:0,63,921	0/0:26,0:26:75.25:0,75,1122	0/0:28,0:27:75.25:0,75,1121	0/0:39,0:39:99:0,117,1754	0/0:36,0:36:99:0,108,1616	0/0:13,0:13:36.12:0,36,533
chr10	26060364	.	TAG	T	136.01	PASS	AC=2;AF=0.038;AN=52;BaseQRankSum=4.316;DP=309;FS=47.736;HRun=0;HaplotypeScore=82.8262;InbreedingCoeff=0.9403;MQ=58.45;MQ0=0;MQRankSum=-4.804;QD=13.60;ReadPosRankSum=-2.189;VQSLOD=1.2893;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:57.18:0,57,1065	0/0:7,0:7:21.07:0,21,405	0/0:11,0:11:33.11:0,33,633	0/0:10,0:10:30.10:0,30,566	0/0:11,0:11:33.10:0,33,575	0/0:11,0:11:30.10:0,30,561	0/0:12,0:12:36.11:0,36,643	1/1:2,8:10:21.01:228,21,0	0/0:13,0:13:39.13:0,39,720	0/0:6,0:6:15.05:0,15,289	0/0:7,0:7:21.07:0,21,405	0/0:18,0:18:54.17:0,54,1022	0/0:12,0:12:33.11:0,33,591	0/0:9,0:9:24.08:0,24,444	0/0:16,0:16:19.58:0,20,384	0/0:8,0:8:24.08:0,24,477	./.	0/0:24,0:24:41.80:0,42,987	0/0:8,0:8:21.07:0,21,396	0/0:13,0:13:36.12:0,36,695	0/0:7,0:7:18.06:0,18,319	0/0:11,0:11:30.10:0,30,570	0/0:6,0:6:18.06:0,18,341	./.	0/0:15,0:15:45.15:0,45,859	0/0:17,0:17:47.98:0,48,913	0/0:11,0:11:33.11:0,33,597	0/0:12,0:12:23.93:0,24,455
chr10	26060376	.	T	TAAC	5471.15	PASS	AB=0.778;AC=43;AF=0.796;AN=54;BaseQRankSum=1.608;DP=265;FS=1.076;HRun=0;HaplotypeScore=68.5481;InbreedingCoeff=0.7456;MQ=57.13;MQ0=1;MQRankSum=-1.788;QD=23.18;ReadPosRankSum=1.598;VQSLOD=4.7672;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:17,1:18:38.61:303,39,0	0/1:5,2:7:0.52:137,0,1	0/0:10,0:9:18.03:0,18,181	0/0:5,0:5:3.01:0,3,33	1/1:6,2:8:23.99:239,24,0	1/1:8,4:12:24.48:313,24,0	1/1:9,0:9:14.98:124,15,0	0/0:6,0:6:2.97:0,3,20	1/1:5,2:7:18.02:248,18,0	1/1:6,0:6:17.84:184,18,0	1/1:8,0:8:20.92:167,21,0	1/1:14,3:17:38.99:409,39,0	1/1:6,1:7:12:166,12,0	0/0:5,0:5:8.99:0,9,75	1/1:1,0:14:9.03:120,9,0	1/1:9,1:10:29.92:268,30,0	0/0:3,0:2:2.92:0,3,17	1/1:22,2:24:28.17:447,28,0	1/1:6,1:6:14.97:194,15,0	1/1:8,2:10:24.74:265,25,0	1/1:5,1:6:11.93:120,12,0	1/1:8,0:8:23.90:206,24,0	1/1:6,0:6:17.88:140,18,0	./.	1/1:12,2:14:29.95:308,30,0	1/1:14,3:17:38.99:436,39,0	1/1:7,2:9:24.40:244,24,0	1/1:5,7:12:27.07:433,27,0
chr10	26060415	.	TA	T	3876.26	PASS	AB=0.868;AC=36;AF=0.643;AN=56;BaseQRankSum=-4.283;DP=273;FS=5.251;HRun=2;HaplotypeScore=50.2834;InbreedingCoeff=0.2083;MQ=66.22;MQ0=0;MQRankSum=0.935;QD=16.08;ReadPosRankSum=3.520;VQSLOD=3.6690;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:14:0.45:1,0,0	0/1:3,7:10:18.18:219,0,18	0/0:8,0:6:14.04:0,14,210	0/0:5,0:4:9.02:0,9,105	1/1:2,6:8:11.11:184,11,0	1/1:13,0:13:14.50:49,15,0	1/1:1,4:5:14.91:164,15,0	1/1:0,24:22:66.13:803,66,0	0/1:3,5:8:4.84:148,0,5	0/1:7,0:7:9.17:142,0,9	1/1:5,0:5:8.29:111,8,0	0/1:5,0:5:0.13:6,0,0	0/1:10,0:10:7.45:7,0,13	1/1:1,8:9:21.07:272,21,0	0/0:9,0:9:21.07:0,21,302	0/0:10,0:10:2.98:0,3,7	1/1:0,6:5:15.05:194,15,0	0/1:22,0:22:4.74:94,0,5	1/1:17,0:16:24:475,24,0	0/1:9,0:9:9.85:189,0,10	0/1:3,4:7:10.45:73,0,10	1/1:6,0:6:17.99:207,18,0	0/1:1,3:4:7.92:104,0,8	1/1:0,4:4:12.04:155,12,0	0/1:10,0:10:1.30:1,0,37	1/1:13,0:13:10.28:243,10,0	0/1:8,0:8:0.48:0,0,18	0/1:17,0:17:0.06:33,0,0
chr10	26060416	.	A	AAT	7046.59	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-2.547;DP=285;FS=2.018;HRun=0;HaplotypeScore=47.7468;InbreedingCoeff=0.7242;MQ=69.45;MQ0=0;MQRankSum=-0.658;QD=26.90;ReadPosRankSum=2.320;VQSLOD=5.6315;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,14:14:3.48:45,3,0	1/1:8,0:10:3.50:298,4,0	0/0:8,0:7:13.82:0,14,210	0/0:6,0:5:9.48:0,9,98	1/1:7,2:9:21.07:270,21,0	1/1:2,13:15:21.07:366,21,0	1/1:5,0:5:14.91:188,15,0	1/1:24,0:22:66.13:847,66,0	1/1:6,2:8:20.90:267,21,0	1/1:1,7:9:26.90:323,27,0	1/1:1,5:6:15.05:228,15,0	1/1:0,5:5:12.04:186,12,0	1/1:1,9:10:9.01:131,9,0	1/1:8,0:8:21.07:272,21,0	0/0:9,0:9:20.76:0,21,217	1/1:1,10:12:11.97:165,12,0	1/1:6,0:5:15.05:194,15,0	1/1:6,17:24:15.94:388,16,0	1/1:3,15:18:48.16:682,48,0	1/1:1,8:9:26.76:350,27,0	1/1:6,1:7:11.81:122,12,0	1/1:0,6:6:18.06:247,18,0	1/1:4,0:4:11.95:134,12,0	1/1:4,0:4:12.04:155,12,0	1/1:2,9:12:2.15:141,2,0	1/1:1,11:12:29.42:497,29,0	1/1:1,6:7:11.95:165,12,0	1/1:0,18:18:24.08:385,24,0
chr10	26060910	.	T	TA	1053.27	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.182;DP=590;FS=1.405;HRun=7;HaplotypeScore=58.8218;InbreedingCoeff=0.9955;MQ=79.26;MQ0=0;MQRankSum=-3.717;QD=27.01;ReadPosRankSum=-3.730;VQSLOD=2.7521;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:90.11:0,90,861	0/0:10,0:10:30.02:0,30,282	0/0:31,0:31:62.15:0,62,616	0/0:18,0:18:41.85:0,42,387	0/0:27,0:27:72.09:0,72,690	0/0:20,0:20:60.08:0,60,573	0/0:14,0:14:42.07:0,42,406	1/1:5,27:32:81.22:957,81,0	0/0:19,0:19:51.05:0,51,481	0/0:23,0:23:63.10:0,63,609	0/0:21,0:21:57.07:0,57,544	0/0:25,0:25:72.11:0,72,695	0/0:25,0:25:69.11:0,69,666	0/0:18,0:18:48.08:0,48,463	0/0:22,0:22:57.09:0,57,550	0/0:25,0:25:69.11:0,69,666	1/1:0,6:6:18.06:216,18,0	0/0:16,0:16:42.07:0,42,406	0/0:22,0:22:56.46:0,56,530	0/0:25,0:25:63.09:0,63,604	0/0:17,0:16:42.06:0,42,405	0/0:22,0:22:63.10:0,63,608	0/0:16,0:16:48.08:0,48,463	0/0:15,0:15:45.07:0,45,435	0/0:20,0:20:57.04:0,57,536	0/0:23,0:23:66.09:0,66,632	0/0:26,0:25:72.09:0,72,688	0/0:16,0:16:48.08:0,48,463
chr10	26061190	.	GCCTGA	G	1712.40	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.112;DP=551;FS=8.813;HRun=0;HaplotypeScore=103.6743;InbreedingCoeff=0.9874;MQ=74.70;MQ0=2;MQRankSum=-6.122;QD=48.93;ReadPosRankSum=-3.548;VQSLOD=2.8072;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:57.20:0,57,1898	0/0:5,0:5:15.03:0,15,424	0/0:29,0:26:70.15:0,70,2152	0/0:24,0:22:66.21:0,66,1875	0/0:25,0:25:75.25:0,75,2320	0/0:16,0:16:48.16:0,48,1589	0/0:20,0:20:60.19:0,60,1920	1/1:0,26:26:69.20:1464,69,0	0/0:15,0:15:45.15:0,45,1499	0/0:19,0:19:57.20:0,57,1886	0/0:20,0:20:60.21:0,60,1942	0/0:22,0:22:66.23:0,66,2194	0/0:22,0:22:66.23:0,66,2181	0/0:25,0:25:75.24:0,75,2419	0/0:19,0:19:57.20:0,57,1743	0/0:11,0:11:33.11:0,33,1049	1/1:0,9:9:18.02:368,18,0	0/0:17,0:17:51.13:0,51,1615	0/0:26,0:26:78.26:0,78,2386	0/0:26,0:26:78.27:0,78,2506	0/0:18,0:18:54.17:0,54,1689	0/0:24,0:24:72.25:0,72,2397	0/0:21,0:21:63.22:0,63,2042	0/0:11,0:11:33.11:0,33,1094	0/0:18,0:18:54.14:0,54,1496	0/0:27,0:27:81.24:0,81,2613	0/0:24,0:24:72.25:0,72,2391	0/0:13,0:13:39.11:0,39,1151
chr10	26063876	.	TGACATAGTG	T	882.09	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.785;DP=287;FS=39.041;HRun=0;HaplotypeScore=83.1042;InbreedingCoeff=0.8725;MQ=76.92;MQ0=3;MQRankSum=-4.134;QD=49.01;ReadPosRankSum=-2.497;VQSLOD=1.1282;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:27.09:0,27,1122	0/0:9,0:9:27.08:0,27,1192	0/0:9,0:9:16.96:0,17,290	0/0:15,0:8:3.43:0,3,200	0/0:17,0:17:51.13:0,51,2093	0/0:15,0:15:39.12:0,39,1468	0/0:9,0:9:27.09:0,27,1352	1/1:4,7:11:27.09:721,27,0	0/0:5,0:5:15.05:0,15,735	0/0:10,0:10:30.10:0,30,1259	0/0:14,0:14:42.11:0,42,1734	0/0:10,0:10:30.10:0,30,1448	0/0:7,0:7:21.07:0,21,949	0/0:7,0:6:18.06:0,18,847	0/0:11,0:11:33.11:0,33,1406	0/0:8,0:8:24.08:0,24,1163	1/1:3,4:7:17.92:280,18,0	0/0:7,0:7:15.05:0,15,616	0/0:12,0:12:33.11:0,33,1426	0/0:17,0:17:51.18:0,51,2380	0/0:8,0:8:21.07:0,21,929	0/0:5,0:5:15.05:0,15,688	0/0:6,0:6:18.06:0,18,883	0/0:7,0:7:21.07:0,21,885	0/0:18,0:17:50.91:0,51,2275	0/0:8,0:8:24.07:0,24,965	0/0:18,0:17:51.17:0,51,2261	0/0:7,0:7:18.06:0,18,814
chr10	26063919	.	AT	A	345.33	PASS	AC=6;AF=0.111;AN=54;BaseQRankSum=1.941;DP=198;FS=7.013;HRun=2;HaplotypeScore=30.4120;InbreedingCoeff=0.5357;MQ=65.05;MQ0=14;MQRankSum=-2.467;QD=14.39;ReadPosRankSum=-1.468;VQSLOD=1.9930;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:3,0:3:6.64:0,7,50	0/0:3,0:3:6.64:0,7,50	0/0:12,0:7:2.84:0,3,14	./.	0/0:7,0:7:16.04:0,16,144	0/0:8,0:8:8.46:0,8,60	0/0:6,0:6:11.47:0,11,95	1/1:10,2:10:30:326,30,0	0/0:2,0:2:3.63:0,4,10	0/0:3,0:3:7.84:0,8,85	0/0:2,0:2:6.02:0,6,80	0/0:8,0:7:15.10:0,15,105	0/0:3,0:3:4.83:0,5,45	0/0:4,0:3:8.06:0,8,86	1/1:1,3:4:11.14:98,11,0	0/0:4,0:4:9.65:0,10,90	1/1:4,4:7:5.38:46,5,0	0/0:7,0:7:9.63:0,10,69	0/0:13,0:11:10.65:0,11,156	0/0:5,0:5:12.04:0,12,165	0/0:6,0:6:8.44:0,8,39	0/0:1,0:1:1.82:0,2,5	0/0:4,0:4:8.20:0,8,54	0/0:4,0:4:5.45:0,5,15	0/0:11,0:10:13.34:0,13,124	0/0:5,0:5:9.70:0,10,45	0/0:9,0:8:13.28:0,13,87	0/0:9,0:9:9.08:0,9,25
chr10	26063920	.	TTA	T	2291.67	PASS	AB=0.864;AC=46;AF=0.885;AN=52;BaseQRankSum=-1.108;DP=197;FS=2.015;HRun=0;HaplotypeScore=26.1952;InbreedingCoeff=0.2655;MQ=65.08;MQ0=14;MQRankSum=-1.127;QD=15.91;ReadPosRankSum=1.743;VQSLOD=2.8549;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,2:3:6.02:74,6,0	1/1:1,2:3:6.02:74,6,0	0/1:12,0:7:0:0,0,0	./.	0/1:5,3:8:30.83:166,0,31	1/1:1,7:8:4.04:121,4,0	1/1:2,3:5:9.03:111,9,0	0/0:2,0:10:5.18:0,5,13	1/1:0,2:2:6.02:74,6,0	1/1:2,1:3:3.01:37,3,0	./.	1/1:2,6:7:15.05:185,15,0	1/1:1,2:3:3.01:37,3,0	1/1:3,1:3:3.01:36,3,0	1/1:4,0:4:8.99:78,9,0	1/1:2,2:4:6.02:74,6,0	1/1:7,0:7:2.80:13,3,0	1/1:2,5:7:6.02:74,6,0	1/1:6,6:11:16.19:167,16,0	0/0:4,0:4:3.01:0,3,49	1/1:1,5:6:9.03:111,9,0	1/1:1,1:2:6.02:73,6,0	1/1:2,2:4:9.03:110,9,0	1/1:0,4:4:9.03:111,9,0	1/1:4,6:9:17.89:199,18,0	1/1:1,4:5:12.04:148,12,0	1/1:2,7:8:12.04:148,12,0	1/1:1,8:9:15.05:185,15,0
chr10	26064019	.	AAC	A	6974.26	PASS	AB=0.758;AC=46;AF=0.821;AN=56;BaseQRankSum=-3.170;DP=464;FS=36.590;HRun=0;HaplotypeScore=64.7262;InbreedingCoeff=0.7055;MQ=63.30;MQ0=11;MQRankSum=3.606;QD=18.26;ReadPosRankSum=4.402;VQSLOD=2.7879;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:6,7:13:16.46:186,0,16	1/1:2,8:10:18.05:209,18,0	0/0:20,0:11:8.76:0,9,87	0/0:23,0:14:9.03:0,9,140	1/1:8,16:25:47.97:536,48,0	1/1:5,16:20:45.13:522,45,0	1/1:4,6:10:15.04:174,15,0	0/0:15,0:21:29.97:0,30,294	1/1:5,13:17:27.08:313,27,0	1/1:8,12:21:38.92:410,39,0	1/1:7,9:16:27.08:313,27,0	1/1:7,12:18:21.06:244,21,0	1/1:5,10:15:24.07:279,24,0	1/1:6,7:13:20.89:223,21,0	0/1:11,2:13:10.75:11,0,300	1/1:2,12:14:33.10:383,33,0	0/0:11,0:17:39.61:0,40,353	1/1:3,3:6:9.33:85,9,0	1/1:13,11:24:36.08:405,36,0	1/1:6,14:21:29.92:327,30,0	1/1:2,13:16:38.95:432,39,0	1/1:9,8:17:21.02:229,21,0	1/1:5,4:9:12.04:139,12,0	1/1:7,8:16:23.90:258,24,0	1/1:3,7:11:20.89:223,21,0	1/1:5,14:19:42.12:487,42,0	1/1:7,16:23:41.96:467,42,0	1/1:5,3:8:11.87:118,12,0
chr10	26064098	.	G	GT	1642.78	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.907;DP=519;FS=4.244;HRun=1;HaplotypeScore=65.5604;InbreedingCoeff=0.9952;MQ=77.69;MQ0=2;MQRankSum=-2.450;QD=37.34;ReadPosRankSum=-3.604;VQSLOD=2.5772;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:57.18:0,57,738	0/0:8,0:8:24.06:0,24,297	0/0:28,0:28:77.06:0,77,940	0/0:16,0:16:28.75:0,29,517	0/0:19,0:19:57.18:0,57,738	0/0:12,0:11:33.09:0,33,413	0/0:14,0:14:36.21:0,36,500	1/1:4,27:31:87.26:1225,87,0	0/0:26,0:26:72.23:0,72,934	0/0:16,0:16:48.16:0,48,623	0/0:18,0:18:51.17:0,51,659	0/0:24,0:24:66.19:0,66,841	0/0:21,0:21:60.19:0,60,776	0/0:19,0:19:54.18:0,54,701	0/0:21,0:21:60.19:0,60,779	0/0:21,0:21:63.18:0,63,797	1/1:1,12:13:39.08:539,39,0	0/0:8,0:7:21.07:0,21,272	0/0:21,0:21:60.19:0,60,778	0/0:26,0:26:75.24:0,75,972	0/0:23,0:23:66.21:0,66,856	0/0:13,0:13:36.12:0,36,466	0/0:18,0:18:54.16:0,54,686	0/0:9,0:9:27.07:0,27,335	0/0:17,0:17:48.16:0,48,622	0/0:20,0:20:54.18:0,54,701	0/0:26,0:26:72.23:0,72,929	0/0:11,0:11:27.09:0,27,351
chr10	26064372	.	C	CA	1511.68	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=10.612;DP=777;FS=2.741;HRun=2;HaplotypeScore=78.7777;InbreedingCoeff=0.9976;MQ=83.21;MQ0=0;MQRankSum=-4.144;QD=32.16;ReadPosRankSum=-3.603;VQSLOD=2.3770;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:51.17:0,51,662	0/0:18,0:18:54.18:0,54,701	0/0:24,0:24:30.32:0,30,631	0/0:21,0:21:60.01:0,60,731	0/0:32,0:32:93.28:0,93,1179	0/0:39,0:38:99:0,117,1499	0/0:20,0:20:60.18:0,60,765	1/1:6,32:38:99:1353,101,0	0/0:31,0:31:93.29:0,93,1193	0/0:32,0:32:96.29:0,96,1216	0/0:22,0:22:66.21:0,66,852	0/0:33,0:33:93.29:0,93,1193	0/0:33,0:33:99:0,99,1236	0/0:45,0:45:99:0,132,1713	0/0:33,0:33:99:0,99,1242	0/0:24,0:24:69.20:0,69,868	1/1:0,9:9:21.07:279,21,0	0/0:16,0:16:48.13:0,48,606	0/0:19,0:19:54.18:0,54,699	0/0:30,0:30:90.28:0,90,1151	0/0:40,0:40:99:0,111,1438	0/0:30,0:30:84.27:0,84,1079	0/0:35,0:35:99:0,105,1336	0/0:21,0:21:60.18:0,60,766	0/0:24,0:24:72.22:0,72,920	0/0:33,0:33:99:0,99,1286	0/0:38,0:38:99:0,111,1412	0/0:19,0:19:57.19:0,57,740
chr10	26064524	.	T	TG	1493.24	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-0.300;DP=760;FS=4.198;HRun=1;HaplotypeScore=73.4203;InbreedingCoeff=0.9971;MQ=90.11;MQ0=0;MQRankSum=-6.661;QD=42.66;ReadPosRankSum=-1.588;VQSLOD=3.4175;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:60.20:0,60,839	0/0:11,0:11:33.11:0,33,462	0/0:32,0:32:93.24:0,93,1216	0/0:30,0:30:84.24:0,84,1129	0/0:38,0:38:99:0,114,1585	0/0:39,0:39:99:0,114,1578	0/0:16,0:16:48.12:0,48,647	1/1:1,24:25:75.26:1197,75,0	0/0:23,0:23:69.22:0,69,948	0/0:35,0:35:99:0,102,1411	0/0:31,0:31:90.30:0,90,1256	0/0:32,0:32:93.31:0,93,1299	0/0:27,0:27:81.27:0,81,1131	0/0:30,0:30:87.27:0,87,1180	0/0:35,0:35:99:0,105,1469	0/0:27,0:27:81.26:0,81,1118	1/1:0,10:10:27.09:417,27,0	0/0:11,0:11:33.07:0,33,439	0/0:23,0:23:63.20:0,63,863	0/0:44,0:44:99:0,132,1806	0/0:25,0:25:72.24:0,72,1007	0/0:27,0:27:78.26:0,78,1087	0/0:25,0:25:75.21:0,75,1027	0/0:27,0:27:78.25:0,78,1072	0/0:32,0:32:96.32:0,96,1342	0/0:40,0:40:99:0,117,1619	0/0:37,0:37:99:0,108,1489	0/0:8,0:8:21.07:0,21,294
chr10	26064634	.	CAT	C	325.46	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.326;DP=604;FS=12.992;HRun=0;HaplotypeScore=74.3303;InbreedingCoeff=0.9637;MQ=75.25;MQ0=0;MQRankSum=-5.288;QD=21.70;ReadPosRankSum=-0.581;VQSLOD=3.1050;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:42.14:0,42,776	0/0:8,0:8:21.05:0,21,367	0/0:14,0:14:38.92:0,39,693	0/0:12,0:12:32.93:0,33,620	0/0:33,0:33:96.31:0,96,1805	0/0:29,0:29:84.26:0,84,1554	0/0:17,0:17:51.17:0,51,963	1/1:3,8:11:21.07:320,21,0	0/0:24,0:24:72.25:0,72,1379	0/0:31,0:31:90.30:0,90,1687	0/0:15,0:15:45.15:0,45,860	0/0:27,0:27:81.25:0,81,1477	0/0:29,0:29:87.25:0,87,1612	0/0:24,0:24:66.23:0,66,1264	0/0:37,0:37:99:0,111,2005	0/0:25,0:25:75.22:0,75,1339	1/1:0,4:4:9.03:118,9,0	0/0:8,0:8:24.08:0,24,462	0/0:22,0:22:57.13:0,57,968	0/0:27,0:27:78.27:0,78,1506	0/0:26,0:26:75.24:0,75,1390	0/0:24,0:24:69.24:0,69,1331	0/0:32,0:32:96.31:0,96,1819	0/0:13,0:13:39.10:0,39,684	0/0:21,0:21:63.18:0,63,1148	0/0:26,0:26:78.20:0,78,1436	0/0:31,0:31:93.32:0,93,1782	0/0:19,0:19:57.20:0,57,1100
chr10	26064828	.	C	CA	177.52	PASS	AC=2;AF=0.037;AN=54;BaseQRankSum=4.108;DP=577;FS=18.321;HRun=0;HaplotypeScore=54.2952;InbreedingCoeff=0.9884;MQ=79.13;MQ0=0;MQRankSum=-4.136;QD=13.66;ReadPosRankSum=-0.827;VQSLOD=2.8016;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:69.21:0,69,945	0/0:14,0:14:42.14:0,42,586	0/0:13,0:13:35.96:0,36,434	0/0:14,0:14:38.32:0,38,460	0/0:43,0:43:99:0,129,1749	0/0:28,0:28:84.27:0,84,1157	0/0:10,0:10:27.07:0,27,346	1/1:0,13:13:18.06:268,18,0	0/0:17,0:17:51.15:0,51,695	0/0:28,0:28:84.28:0,84,1175	0/0:22,0:22:66.22:0,66,922	0/0:17,0:17:51.16:0,51,696	0/0:21,0:21:63.21:0,63,880	0/0:18,0:18:54.17:0,54,739	0/0:20,0:20:60.19:0,60,822	0/0:24,0:24:72.24:0,72,1006	./.	0/0:10,0:10:24.08:0,24,335	0/0:21,0:21:60.18:0,60,820	0/0:29,0:29:87.29:0,87,1215	0/0:11,0:11:33.11:0,33,461	0/0:18,0:18:51.17:0,51,712	0/0:30,0:30:90.29:0,90,1240	0/0:20,0:20:60.20:0,60,839	0/0:33,0:33:96.32:0,96,1342	0/0:22,0:22:63.21:0,63,881	0/0:35,0:35:99:0,105,1451	0/0:21,0:21:63.07:0,63,786
chr10	26065057	.	C	CTT	556.27	PASS	AB=0.685;AC=3;AF=0.054;AN=56;BaseQRankSum=7.181;DP=627;FS=3.065;HRun=0;HaplotypeScore=76.4605;InbreedingCoeff=0.5934;MQ=86.55;MQ0=0;MQRankSum=-6.951;QD=13.91;ReadPosRankSum=-2.136;VQSLOD=2.6600;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:45.15:0,45,729	0/0:11,0:11:33.10:0,33,514	0/0:22,0:22:62.63:0,63,874	0/0:21,0:21:63.18:0,63,966	0/0:44,0:44:99:0,123,2006	0/0:27,0:27:81.24:0,81,1251	0/0:15,0:15:45.14:0,45,705	0/1:20,17:36:99:536,0,518	0/0:24,0:24:72.25:0,72,1174	0/0:23,0:23:69.22:0,69,1081	0/0:33,0:33:96.31:0,96,1541	0/0:21,0:21:63.22:0,63,1027	0/0:20,0:20:60.20:0,60,978	0/0:20,0:20:60.20:0,60,978	0/0:22,0:22:66.23:0,66,1075	0/0:17,0:17:51.17:0,51,827	1/1:0,3:3:9.03:117,9,0	0/0:20,0:20:60.20:0,60,964	0/0:16,0:16:45.15:0,45,734	0/0:39,0:39:99:0,114,1804	0/0:9,0:9:24.08:0,24,388	0/0:23,0:23:69.22:0,69,1096	0/0:20,0:20:57.18:0,57,905	0/0:15,0:15:42.14:0,42,678	0/0:22,0:22:66.23:0,66,1077	0/0:31,0:31:90.31:0,90,1469	0/0:43,0:43:99:0,126,2031	0/0:14,0:14:42.14:0,42,685
chr10	26065058	.	A	AAAG	1025.48	PASS	AB=0.679;AC=3;AF=0.054;AN=56;BaseQRankSum=4.568;DP=624;FS=6.959;HRun=0;HaplotypeScore=87.5444;InbreedingCoeff=0.6194;MQ=86.12;MQ0=0;MQRankSum=-6.464;QD=25.64;ReadPosRankSum=-2.509;VQSLOD=2.4925;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:45.15:0,45,828	0/0:11,0:11:33.10:0,33,584	0/0:22,0:22:63.14:0,63,998	0/0:20,0:20:60.20:0,60,1017	0/0:44,0:44:99:0,129,2328	0/0:27,0:27:81.22:0,81,1429	0/0:15,0:15:45.15:0,45,824	0/1:19,16:35:99:917,0,410	0/0:25,0:25:72.25:0,72,1336	0/0:22,0:22:66.22:0,66,1190	0/0:32,0:32:96.33:0,96,1781	0/0:21,0:21:63.22:0,63,1167	0/0:21,0:21:60.21:0,60,1113	0/0:20,0:20:60.21:0,60,1113	0/0:22,0:22:66.23:0,66,1218	0/0:17,0:17:51.17:0,51,945	1/1:1,3:4:12.04:208,12,0	0/0:20,0:20:60.20:0,60,1096	0/0:16,0:16:45.15:0,45,828	0/0:38,0:38:99:0,114,2036	0/0:9,0:9:27.08:0,27,465	0/0:23,0:23:69.24:0,69,1276	0/0:19,0:19:57.18:0,57,1031	0/0:15,0:15:45.13:0,45,797	0/0:22,0:22:66.23:0,66,1223	0/0:31,0:31:93.31:0,93,1701	0/0:43,0:43:99:0,126,2331	0/0:14,0:14:42.14:0,42,783
chr10	26066885	.	C	CAAA	23420.87	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-2.474;DP=668;FS=1.538;HRun=10;HaplotypeScore=111.8158;InbreedingCoeff=0.9143;MQ=66.42;MQ0=0;MQRankSum=-2.048;QD=37.53;ReadPosRankSum=-0.574;VQSLOD=4.3791;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,29:36:75.26:1411,75,0	1/1:3,11:17:42.13:757,42,0	0/0:8,0:8:2.07:0,2,132	0/0:11,0:11:16.39:0,16,147	1/1:4,23:27:69.23:1243,69,0	1/1:6,20:30:60.16:1031,60,0	1/1:5,8:13:24.08:461,24,0	1/1:5,2:38:96.95:813,97,0	1/1:2,21:26:58.42:1062,58,0	1/1:2,24:29:81.15:1323,81,0	1/1:6,15:23:54.16:988,54,0	1/1:1,20:22:45.15:864,45,0	1/1:7,21:31:61.74:1099,62,0	1/1:3,20:26:51.17:957,51,0	0/0:25,0:25:63.14:0,63,766	1/1:3,16:20:48.16:898,48,0	1/1:2,0:19:44.84:347,45,0	1/1:7,14:23:48.14:858,48,0	1/1:8,14:28:63.14:980,63,0	1/1:8,17:26:60.20:1041,60,0	1/1:3,11:14:21.07:401,21,0	1/1:5,16:23:48.16:905,48,0	1/1:10,13:24:36.08:600,36,0	1/1:4,14:19:33.11:617,33,0	1/1:3,20:25:63.19:1142,63,0	1/1:2,18:25:66.19:1155,66,0	1/1:7,39:47:99:2172,114,0	1/1:2,5:11:18.04:296,18,0
chr10	26068090	.	TA	T	11897.77	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=2.721;DP=542;FS=4.096;HRun=8;HaplotypeScore=58.6051;InbreedingCoeff=0.9687;MQ=75.96;MQ0=0;MQRankSum=-3.988;QD=24.13;ReadPosRankSum=2.607;VQSLOD=5.6983;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,24:28:60.09:579,60,0	1/1:3,9:12:24.04:232,24,0	0/0:15,0:16:33.81:0,34,396	0/0:10,0:10:8.02:0,8,111	1/1:1,15:16:45.02:425,45,0	1/1:0,14:14:39.06:376,39,0	1/1:2,13:15:39.06:376,39,0	1/1:5,24:29:69.09:660,69,0	1/1:1,28:29:78.13:753,78,0	1/1:3,26:29:78.10:744,78,0	1/1:3,21:24:63.10:608,63,0	1/1:3,11:14:30.05:290,30,0	1/1:1,20:21:51.08:492,51,0	1/1:1,19:20:51.08:492,51,0	0/0:23,0:23:63.15:0,63,745	1/1:0,21:21:57.09:550,57,0	1/1:1,21:22:48.03:454,48,0	1/1:2,9:11:24.04:232,24,0	1/1:4,25:29:74.98:685,75,0	1/1:1,27:28:75.11:724,75,0	1/1:1,5:6:17.77:156,18,0	1/1:2,10:12:30.04:289,30,0	1/1:1,24:25:63.10:608,63,0	1/1:0,16:16:33.05:319,33,0	1/1:0,24:24:63.10:608,63,0	1/1:2,20:22:60.09:579,60,0	1/1:1,15:16:39.06:376,39,0	1/1:0,10:10:30.05:290,30,0
chr10	26068227	.	AGTAAACTCGAAATC	A	42673.06	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=12.223;DP=562;FS=0.000;HRun=0;HaplotypeScore=258.7839;InbreedingCoeff=0.9305;MQ=69.97;MQ0=0;MQRankSum=-11.674;QD=85.69;ReadPosRankSum=5.191;VQSLOD=3.7504;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,17:23:24.04:814,24,0	1/1:3,7:10:21.07:896,21,0	0/0:18,0:18:51.17:0,51,2954	0/0:16,0:16:45.15:0,45,2538	1/1:2,31:33:78.26:3140,78,0	1/1:0,13:13:36.12:1536,36,0	1/1:4,17:21:42.14:1792,42,0	1/1:7,23:30:66.21:2072,66,0	1/1:0,28:28:69.24:2909,69,0	1/1:6,27:33:81.24:2765,81,0	1/1:1,24:25:63.13:2271,63,0	1/1:1,20:21:60.21:2558,60,0	1/1:6,18:24:60.21:2445,60,0	1/1:1,14:15:33.11:1408,33,0	0/0:30,0:30:90.31:0,90,6177	1/1:4,15:19:29.74:1279,30,0	1/1:4,12:16:30.10:1280,30,0	1/1:2,2:4:6.02:256,6,0	1/1:10,15:25:45.14:1573,45,0	1/1:3,36:39:90.31:3748,90,0	1/1:1,7:8:12.04:474,12,0	1/1:1,14:15:42.14:1771,42,0	1/1:3,16:19:42.10:1553,42,0	1/1:4,11:15:21.07:766,21,0	1/1:3,11:14:30.10:1280,30,0	1/1:4,18:22:54.19:2169,54,0	1/1:4,15:19:36.12:1536,36,0	1/1:1,6:7:9.03:384,9,0
chr10	26068950	.	CTATATCTATATCTATATCTATATCTATATCTATATCTATATCTATATCTATATCTA	C	4420.41	PASS	AB=1.000;AC=30;AF=0.750;AN=40;BaseQRankSum=3.386;DP=234;FS=11.323;HRun=0;HaplotypeScore=229.4284;InbreedingCoeff=0.3120;MQ=40.25;MQ0=33;MQRankSum=-2.018;QD=27.12;ReadPosRankSum=1.719;VQSLOD=2.7589;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:12,0:9:3.01:57,3,0	./.	0/0:2,0:1:2.60:0,3,10	0/0:3,0:2:6.02:0,6,112	1/1:7,0:5:3:25,3,0	1/1:10,0:8:5.99:49,6,0	1/1:6,0:5:3.01:87,3,0	0/1:13,0:11:61.75:230,0,62	1/1:7,0:6:9.02:246,9,0	1/1:8,0:8:18.06:630,18,0	1/1:10,0:7:3.01:58,3,0	./.	1/1:9,0:8:18.06:463,18,0	./.	0/0:5,0:5:12.03:0,12,309	1/1:4,0:4:2.99:24,3,0	1/1:7,0:5:2.88:52,3,0	0/1:17,0:13:99:123,0,297	1/1:7,0:6:15.05:530,15,0	./.	./.	./.	./.	0/0:3,0:3:0:0,0,0	./.	1/1:2,19:20:38.20:863,38,0	1/1:12,0:11:24.08:839,24,0	1/1:12,0:6:9:146,9,0
chr10	26068952	.	A	ATC	2207.96	PASS	AB=0.826;AC=29;AF=0.725;AN=40;BaseQRankSum=0.108;DP=229;FS=6.323;HRun=0;HaplotypeScore=81.4197;InbreedingCoeff=0.1271;MQ=38.97;MQ0=39;MQRankSum=-2.219;QD=13.55;ReadPosRankSum=-0.108;VQSLOD=2.9625;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:11,1:8:0.66:52,0,1	./.	1/1:2,0:1:0.89:2,1,0	0/0:3,0:2:6.02:0,6,91	1/1:5,3:5:3:25,3,0	1/1:6,4:8:5.99:49,6,0	1/1:3,1:3:3.01:52,3,0	0/1:7,5:10:21.77:333,0,22	1/1:5,2:6:8.96:102,9,0	1/1:3,3:6:18.04:281,18,0	1/1:6,3:6:3.01:58,3,0	./.	1/1:5,5:8:18.06:302,18,0	./.	0/0:6,0:6:12.03:0,12,163	1/1:1,3:4:2.99:24,3,0	1/1:3,2:3:2.91:52,3,0	0/1:9,9:13:35.35:110,0,35	1/1:4,3:6:15.03:229,15,0	./.	./.	./.	./.	0/0:0,2:2:0:0,0,0	./.	0/1:21,0:20:13.70:280,0,14	1/1:9,4:11:23.93:252,24,0	0/1:12,3:7:8.94:128,0,9
chr10	26068970	.	A	ATC	197.51	PASS	AB=1.000;AC=10;AF=0.455;AN=22;BaseQRankSum=1.279;DP=214;FS=4.043;HRun=0;HaplotypeScore=77.1509;InbreedingCoeff=0.2707;MQ=25.54;MQ0=84;MQRankSum=-1.928;QD=3.59;ReadPosRankSum=0.306;VQSLOD=1.1951;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	./.	./.	0/0:3,0:1:0.47:0,0,1	./.	1/1:5,1:5:2.80:13,3,0	1/1:2,1:3:7.97:74,8,0	./.	./.	1/1:8,0:6:4.29:39,4,0	./.	0/0:3,0:3:3:0,3,25	./.	0/0:7,0:3:0:0,0,0	0/0:29,2:9:3.90:0,4,48	0/1:6,0:4:0.77:42,0,1	./.	./.	./.	./.	./.	./.	0/1:22,0:19:24.02:64,0,24	1/1:9,1:8:9.34:58,9,0	0/0:17,2:6:4.49:0,4,58
chr10	26068982	.	A	ATC	47.03	PASS	AB=0.983;AC=10;AF=0.385;AN=26;BaseQRankSum=3.293;DP=262;FS=1.489;HRun=0;HaplotypeScore=108.7723;InbreedingCoeff=-0.0943;MQ=25.31;MQ0=92;MQRankSum=-1.120;QD=0.47;ReadPosRankSum=-0.362;VQSLOD=1.9799;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:9:0:0,0,0	./.	./.	./.	./.	./.	./.	./.	1/1:6,0:5:2.97:20,3,0	0/1:7,0:5:27.51:28,0,60	./.	0/0:4,0:4:0:0,0,0	0/1:8,1:7:4.02:4,0,11	./.	./.	./.	0/0:8,0:4:0:0,0,0	0/0:27,3:7:3.48:0,3,47	0/1:7,0:5:19.63:20,0,45	./.	0/0:8,1:5:2.97:0,3,20	./.	./.	./.	1/1:10,0:6:1.25:3,1,0	0/1:28,0:25:9.47:9,0,90	0/1:11,0:9:25.34:52,0,25	0/0:20,0:7:8.82:0,9,104
chr10	26068994	.	A	ATC	357.89	PASS	AB=0.941;AC=14;AF=0.269;AN=52;BaseQRankSum=2.558;DP=394;FS=14.557;HRun=0;HaplotypeScore=170.5461;InbreedingCoeff=0.0479;MQ=27.21;MQ0=96;MQRankSum=0.156;QD=2.06;ReadPosRankSum=-1.195;VQSLOD=1.8678;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,1:19:2.84:0,3,18	0/0:3,0:3:0.47:0,0,1	./.	./.	0/0:16,0:11:2.67:0,3,14	0/0:13,0:12:2.55:0,3,19	1/1:7,0:4:2.97:23,3,0	0/0:18,0:12:26.68:0,27,177	0/0:6,3:9:0.70:0,1,1	0/1:18,0:15:60.78:61,0,153	0/1:27,0:24:0:0,0,0	0/0:7,0:7:2.92:0,3,17	0/0:12,0:10:1.84:0,2,17	1/1:14,0:11:0.14:0,0,0	0/0:5,0:5:3:0,3,25	0/0:11,7:17:5.69:0,6,34	0/0:13,0:8:5.85:0,6,34	0/0:33,0:9:9.41:0,9,86	0/1:9,3:10:40.29:135,0,40	0/0:25,0:22:2.45:0,2,15	0/0:13,0:9:5.51:0,6,33	0/1:6,0:6:0:0,0,0	0/1:6,0:5:0:0,0,0	0/1:5,0:3:0.01:0,0,0	0/1:8,9:13:0:0,0,0	0/1:28,0:25:67.22:188,0,67	0/1:11,0:9:16.03:16,0,17	0/1:22,1:10:39.81:40,0,111
chr10	26069000	.	A	ATC	629.07	PASS	AB=0.853;AC=23;AF=0.442;AN=52;BaseQRankSum=3.465;DP=422;FS=0.815;HRun=0;HaplotypeScore=181.1422;InbreedingCoeff=-0.0319;MQ=28.84;MQ0=94;MQRankSum=2.916;QD=2.15;ReadPosRankSum=-2.586;VQSLOD=2.4574;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,2:20:3.01:0,3,42	0/0:3,1:4:0.47:0,0,1	./.	./.	1/1:19,0:14:5.54:43,6,0	0/1:11,4:14:7.07:7,0,36	0/0:8,0:5:2.98:0,3,43	0/0:24,0:18:42.10:0,42,574	0/0:9,0:8:0.27:0,0,1	0/1:17,5:19:99:195,0,378	0/1:24,8:29:0:0,0,0	0/1:7,1:8:20.04:25,0,20	0/1:9,3:10:17.34:17,0,38	1/1:10,7:14:2.55:9,3,0	0/0:5,0:5:3.01:0,3,46	0/1:21,0:20:9.42:9,0,74	0/0:12,0:7:6.02:0,6,89	0/0:33,0:9:8.62:0,9,136	0/1:10,1:10:75.68:76,0,157	1/1:25,0:22:3.01:32,3,0	1/1:13,0:9:6.01:63,6,0	0/1:4,1:5:0:0,0,0	0/1:3,3:5:0:0,0,0	0/1:5,0:3:0.01:0,0,0	1/1:18,0:14:2.22:7,2,0	0/1:24,4:25:99:200,0,124	0/1:8,3:9:34.35:65,0,34	0/1:22,2:12:8.05:8,0,172
chr10	26069006	.	A	ATC	1661.34	PASS	AB=0.825;AC=32;AF=0.615;AN=52;BaseQRankSum=1.547;DP=459;FS=6.225;HRun=0;HaplotypeScore=188.0206;InbreedingCoeff=0.3227;MQ=30.22;MQ0=97;MQRankSum=3.271;QD=4.93;ReadPosRankSum=-1.476;VQSLOD=2.5909;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,5:21:4.72:0,5,17	0/0:2,2:4:0.47:0,0,1	./.	./.	1/1:21,1:17:11.85:186,12,0	0/1:12,4:15:0.94:50,0,1	0/1:11,1:9:0.13:0,0,3	0/0:29,0:23:8.08:0,8,64	1/1:9,0:8:2.08:24,2,0	0/1:16,6:19:8.54:295,0,9	0/1:16,20:33:0:0,0,0	0/1:7,2:9:0.85:44,0,1	1/1:9,3:10:1.80:36,2,0	1/1:9,9:15:8.59:109,9,0	0/0:7,0:7:9:0,9,98	1/1:22,0:21:4.94:100,5,0	0/0:11,1:7:3.95:0,4,11	0/0:34,0:10:6.67:0,7,50	1/1:10,2:10:5.99:145,6,0	1/1:30,0:26:3.01:33,3,0	1/1:16,0:12:6.01:64,6,0	1/1:5,1:6:3:25,3,0	0/1:4,3:5:0:0,0,0	0/1:4,0:3:0.01:0,0,0	1/1:17,1:14:3.01:48,3,0	1/1:24,4:25:27.04:370,27,0	1/1:5,6:9:14:113,14,0	0/1:24,2:13:16.27:154,0,16
chr10	26069012	.	ATC	A	99.15	PASS	AB=1.000;AC=4;AF=0.077;AN=52;BaseQRankSum=-1.185;DP=526;FS=1.388;HRun=0;HaplotypeScore=217.2407;InbreedingCoeff=0.3704;MQ=31.78;MQ0=100;MQRankSum=1.005;QD=4.51;ReadPosRankSum=-1.163;VQSLOD=2.8919;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:25:5.19:0,5,22	0/0:5,0:5:2.61:0,3,18	./.	./.	0/0:23,0:18:14.41:0,14,125	0/0:16,0:15:5.83:0,6,67	0/0:13,0:11:0.67:0,1,44	0/0:48,0:38:98.59:0,99,456	0/0:14,0:13:5.51:0,6,73	0/0:24,0:21:50.89:0,51,467	0/0:37,0:34:5.77:0,6,40	0/0:10,0:10:11.77:0,12,142	0/0:17,0:15:15.15:0,15,190	0/0:21,0:18:14.46:0,14,126	1/1:3,5:8:12.04:183,12,0	0/0:23,0:22:15.04:0,15,222	0/0:13,0:8:9.24:0,9,113	0/0:35,0:11:0.58:0,1,40	0/0:12,0:10:11.29:0,11,110	0/0:35,0:31:14.85:0,15,199	0/0:17,0:13:9.03:0,9,115	0/0:7,0:7:6.01:0,6,74	0/1:9,0:7:0.08:0,0,0	0/1:5,0:3:0:0,0,0	0/0:19,0:15:6.02:0,6,85	0/0:34,0:31:44.41:0,44,466	0/0:13,0:11:16.82:0,17,164	0/0:28,0:15:30.40:0,30,351
chr10	26069921	.	CA	C	14672.03	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=2.971;DP=515;FS=14.664;HRun=5;HaplotypeScore=55.9538;InbreedingCoeff=0.9943;MQ=75.91;MQ0=0;MQRankSum=-4.692;QD=30.95;ReadPosRankSum=3.284;VQSLOD=4.0330;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,17:20:45.13:510,45,0	1/1:0,9:9:24.07:272,24,0	0/0:11,0:11:29.56:0,30,332	0/0:10,0:10:20.45:0,20,217	1/1:1,30:31:84.23:941,84,0	1/1:1,31:32:87.25:987,87,0	1/1:1,8:9:24.07:272,24,0	1/1:1,28:29:81.22:909,81,0	1/1:1,15:16:45.13:510,45,0	1/1:0,33:33:99:1122,99,0	1/1:1,8:9:27.07:294,27,0	1/1:0,13:13:39.11:442,39,0	1/1:0,19:19:51.14:576,51,0	1/1:0,20:20:60.17:681,60,0	0/0:20,0:20:57.16:0,57,748	1/1:1,20:21:57.16:647,57,0	1/1:0,13:13:39.11:442,39,0	1/1:0,9:9:27.08:306,27,0	1/1:4,16:20:48.13:544,48,0	1/1:2,31:33:87.24:981,87,0	1/1:0,14:14:39.11:442,39,0	1/1:1,14:15:38.14:414,38,0	1/1:1,24:25:63.14:700,63,0	1/1:0,8:8:21.06:238,21,0	1/1:0,15:15:42.12:476,42,0	1/1:1,20:21:60.15:671,60,0	1/1:2,25:27:75.21:851,75,0	1/1:0,13:13:39.11:442,39,0
chr10	26070195	.	AAAAAAAC	A	9199.52	PASS	AB=1.000;AC=48;AF=0.857;AN=56;BaseQRankSum=5.338;DP=453;FS=5.558;HRun=0;HaplotypeScore=164.8769;InbreedingCoeff=0.5588;MQ=66.56;MQ0=0;MQRankSum=-7.779;QD=22.27;ReadPosRankSum=8.399;VQSLOD=3.4899;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:7,0:7:1.99:169,2,0	1/1:10,1:11:27.03:324,27,0	0/0:16,0:13:31.33:0,31,718	0/0:12,0:12:23.57:0,24,383	1/1:32,0:32:4.13:548,4,0	1/1:22,0:22:45.10:469,45,0	1/1:10,0:10:0.20:167,0,0	0/1:22,0:22:20.11:155,0,20	1/1:17,0:17:42.10:438,42,0	1/1:22,0:22:62.69:611,63,0	1/1:28,0:28:37.96:642,38,0	1/1:19,0:19:40.96:436,41,0	1/1:19,0:19:30.29:481,30,0	1/1:22,0:22:57.09:591,57,0	0/0:12,0:12:36.10:0,36,1079	1/1:23,0:23:49.32:506,49,0	1/1:9,0:9:21.82:93,22,0	1/1:4,0:4:5.99:79,6,0	1/1:25,0:25:66.92:601,67,0	1/1:17,0:17:22.98:401,23,0	1/1:7,0:7:11.99:114,12,0	1/1:16,1:17:41.64:434,42,0	1/1:7,0:7:21.01:207,21,0	0/1:8,0:8:21.69:107,0,22	1/1:18,1:19:14.73:420,15,0	1/1:16,0:16:45.09:463,45,0	1/1:21,0:21:48.11:501,48,0	1/1:8,1:9:20.79:242,21,0
chr10	26070196	.	AAAAAAC	A	19385.88	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-0.452;DP=442;FS=2.329;HRun=0;HaplotypeScore=118.6368;InbreedingCoeff=0.9565;MQ=67.06;MQ0=0;MQRankSum=-7.341;QD=48.10;ReadPosRankSum=6.112;VQSLOD=4.9463;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,6:6:18.06:396,18,0	1/1:1,10:11:27.07:573,27,0	0/0:16,0:13:22.11:0,22,593	0/0:12,0:12:25.41:0,25,337	1/1:1,31:32:53.17:1237,53,0	1/1:0,22:22:45.15:988,45,0	1/1:0,8:8:18.06:395,18,0	1/1:22,0:22:39.32:439,39,0	1/1:0,17:17:42.14:922,42,0	1/1:1,20:21:63.21:1301,63,0	1/1:1,27:28:71.92:1353,72,0	1/1:0,18:18:45.09:940,45,0	1/1:0,18:18:48.16:1054,48,0	1/1:1,20:21:57.20:1244,57,0	0/0:11,0:11:33.08:0,33,896	1/1:0,23:23:54.03:1046,54,0	1/1:9,0:9:24:209,24,0	1/1:2,2:4:11.95:172,12,0	1/1:0,25:25:75.09:1286,75,0	1/1:0,17:17:47.94:911,48,0	1/1:0,7:7:12:218,12,0	1/1:2,15:17:42:766,42,0	1/1:0,7:7:21.03:415,21,0	1/1:0,6:6:12.04:263,12,0	1/1:1,17:18:42.08:854,42,0	1/1:0,16:16:45.13:947,45,0	1/1:0,21:21:48.04:1054,48,0	1/1:2,7:9:21.06:402,21,0
chr10	26070197	.	AAAAAC	A	13254.70	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=0.815;DP=438;FS=0.747;HRun=0;HaplotypeScore=131.9133;InbreedingCoeff=0.9571;MQ=66.13;MQ0=0;MQRankSum=-6.718;QD=33.05;ReadPosRankSum=5.224;VQSLOD=4.7498;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,0:6:18.06:239,18,0	1/1:11,0:11:27.07:359,27,0	0/0:16,0:13:28.45:0,28,497	0/0:11,0:11:23.63:0,24,291	1/1:31,0:31:74.62:819,75,0	1/1:22,0:22:45.15:597,45,0	1/1:8,0:8:18.06:239,18,0	1/1:0,21:21:60.15:1014,60,0	1/1:17,0:17:42.14:558,42,0	1/1:20,0:21:63.14:782,63,0	1/1:27,1:28:71.95:892,72,0	1/1:18,0:18:45.08:576,45,0	1/1:18,0:18:48.16:638,48,0	1/1:20,0:21:57.19:750,57,0	0/0:10,0:10:30.09:0,30,755	1/1:23,0:23:54.02:655,54,0	1/1:0,9:9:24.08:474,24,0	1/1:4,0:4:11.95:120,12,0	1/1:25,0:25:75.04:825,75,0	1/1:17,0:17:47.94:573,48,0	1/1:7,0:7:12:140,12,0	1/1:16,1:17:42.01:533,42,0	1/1:7,0:7:21.03:258,21,0	1/1:6,0:6:12.04:159,12,0	1/1:18,0:18:42.07:536,42,0	1/1:16,0:16:45.13:583,45,0	1/1:21,0:21:47.72:637,48,0	1/1:8,1:9:21.07:299,21,0
chr10	26071405	.	G	GGTGTGTGT	5551.79	PASS	AB=1.000;AC=45;AF=0.900;AN=50;BaseQRankSum=-1.909;DP=545;FS=4.015;HRun=0;HaplotypeScore=159.4073;InbreedingCoeff=0.4875;MQ=68.66;MQ0=6;MQRankSum=0.876;QD=13.00;ReadPosRankSum=-0.547;VQSLOD=3.8799;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:31,0:30:17.98:420,18,0	./.	./.	./.	1/1:17,0:17:5.93:133,6,0	1/1:20,0:18:5.72:93,6,0	1/1:19,0:22:3.46:25,3,0	1/1:23,0:21:3.06:8,3,0	1/1:18,0:18:9.01:219,9,0	1/1:19,0:19:9.50:220,10,0	1/1:15,0:14:5.87:134,6,0	1/1:23,0:23:12.04:242,12,0	1/1:7,6:15:7.36:134,7,0	1/1:14,0:18:15.05:458,15,0	0/0:12,0:15:5.23:0,5,62	1/1:18,0:18:16.27:303,16,0	0/0:20,0:25:8.71:0,9,109	1/1:13,0:12:13.55:187,14,0	1/1:20,0:19:15.93:375,16,0	1/1:24,0:24:14.40:243,14,0	1/1:31,0:31:24.01:493,24,0	1/1:11,0:11:9:122,9,0	0/1:9,0:9:0:0,0,0	1/1:13,0:12:8.96:262,9,0	1/1:20,0:19:2.62:302,3,0	1/1:16,0:15:21.07:540,21,0	1/1:13,5:19:11.25:269,11,0	1/1:10,0:9:15.05:370,15,0
chr10	26072945	.	GTA	G	667.20	PASS	AB=0.916;AC=7;AF=0.125;AN=56;BaseQRankSum=-0.655;DP=485;FS=8.490;HRun=0;HaplotypeScore=153.4639;InbreedingCoeff=-0.1804;MQ=48.61;MQ0=15;MQRankSum=-4.706;QD=3.79;ReadPosRankSum=-0.973;VQSLOD=1.9732;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:15,0:14:0.15:0,0,65	0/0:4,0:6:6.02:0,6,76	0/1:29,1:8:9.17:9,0,15	0/0:48,0:14:6.55:0,7,131	0/0:24,0:25:9.02:0,9,105	0/0:10,1:11:15.05:0,15,185	0/0:6,6:9:9.03:0,9,112	0/1:44,19:62:99:395,0,305	0/0:5,0:8:3.01:0,3,36	0/1:14,6:19:99:258,0,250	0/0:15,3:23:12.02:0,12,131	0/0:4,0:6:6.02:0,6,70	0/0:5,1:5:6.01:0,6,60	0/0:8,0:9:5.98:0,6,73	0/0:43,0:42:99:0,108,1886	0/0:5,1:6:8.99:0,9,91	0/0:5,0:4:1.82:0,2,5	0/0:1,0:1:3:0,3,28	0/0:4,0:4:10.58:0,11,134	0/0:17,0:17:9.03:0,9,106	0/0:9,1:10:2.93:0,3,36	0/0:5,0:6:6.01:0,6,61	0/0:12,2:14:8.93:0,9,106	0/0:6,1:6:3.01:0,3,36	0/0:19,2:22:27.07:0,27,301	0/1:10,1:12:29.98:30,0,220	0/1:16,1:19:70.92:71,0,200	0/1:8,0:11:20.69:21,0,225
chr10	26073727	.	T	TC	933.98	PASS	AB=0.827;AC=34;AF=0.607;AN=56;BaseQRankSum=-5.031;DP=292;FS=13.473;HRun=11;HaplotypeScore=39.0254;InbreedingCoeff=0.0899;MQ=89.14;MQ0=1;MQRankSum=0.424;QD=4.23;ReadPosRankSum=1.032;VQSLOD=-0.0606;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,0:7:5.79:38,6,0	1/1:6,1:7:2.98:22,3,0	0/0:18,2:21:5.81:0,6,38	0/0:7,0:8:8.95:0,9,69	0/0:13,5:19:4.25:0,4,24	0/1:8,11:19:19.89:159,0,20	1/1:0,5:5:9.02:90,9,0	1/1:19,0:19:3:25,3,0	0/0:13,0:13:1.95:0,2,6	0/1:9,0:9:0:0,0,0	1/1:3,4:7:6.01:61,6,0	0/1:4,0:5:0.86:20,0,1	1/1:7,1:8:2.96:19,3,0	1/1:5,2:7:2.83:30,3,0	1/1:7,0:7:11.70:73,12,0	0/1:9,6:15:3.95:80,0,4	1/1:9,0:9:14.96:125,15,0	0/1:7,0:7:9.27:37,0,9	0/1:6,4:12:43.78:44,0,50	1/1:13,3:16:3.01:30,3,0	1/1:8,0:7:6.01:61,6,0	0/1:6,0:6:0:0,0,0	0/0:9,1:10:2.91:0,3,22	0/1:6,0:6:14.20:41,0,14	0/1:7,3:10:0:0,0,0	0/1:5,3:8:0:0,0,0	0/1:7,10:17:31.43:76,0,31	0/1:4,3:7:14.21:45,0,14
chr10	26074173	.	GA	G	15381.44	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=4.011;DP=553;FS=18.116;HRun=4;HaplotypeScore=56.2045;InbreedingCoeff=0.9960;MQ=89.01;MQ0=0;MQRankSum=-6.950;QD=31.98;ReadPosRankSum=3.453;VQSLOD=3.1590;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,18:18:48.15:575,48,0	1/1:0,6:6:18.06:216,18,0	0/0:19,0:19:45.10:0,45,575	0/0:23,0:23:56.30:0,56,743	1/1:4,19:23:63.19:745,63,0	1/1:1,28:29:81.25:970,81,0	1/1:0,10:10:27.02:306,27,0	1/1:2,29:31:87.22:1008,87,0	1/1:2,25:27:69.21:826,69,0	1/1:1,21:22:63.17:736,63,0	1/1:0,16:16:48.15:573,48,0	1/1:1,17:18:42.13:503,42,0	1/1:0,20:20:60.18:717,60,0	1/1:0,14:14:39.12:468,39,0	0/0:30,0:30:84.27:0,84,1159	1/1:1,25:26:57.17:683,57,0	1/1:0,15:15:42.13:501,42,0	1/1:0,10:10:27.08:324,27,0	1/1:1,30:31:93.23:1068,93,0	1/1:4,24:28:72.08:827,72,0	1/1:0,19:19:54.17:648,54,0	1/1:1,15:16:45.14:540,45,0	1/1:1,18:19:41.88:503,42,0	1/1:0,11:11:30.09:360,30,0	1/1:0,13:13:33.06:380,33,0	1/1:0,23:23:63.19:755,63,0	1/1:0,16:16:45.14:539,45,0	1/1:3,17:20:51.15:611,51,0
chr10	26074321	.	TC	T	16167.61	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=5.654;DP=467;FS=11.297;HRun=1;HaplotypeScore=132.2854;InbreedingCoeff=0.9954;MQ=71.99;MQ0=1;MQRankSum=-6.317;QD=39.63;ReadPosRankSum=3.245;VQSLOD=3.0515;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,21:21:60.16:818,60,0	1/1:0,7:7:21.07:293,21,0	0/0:19,0:18:50.77:0,51,725	0/0:19,0:15:42.14:0,42,657	1/1:0,21:21:63.21:879,63,0	1/1:0,30:30:84.28:1172,84,0	1/1:0,18:18:54.18:751,54,0	1/1:0,31:28:81.27:1132,81,0	1/1:0,11:11:33.11:460,33,0	1/1:0,23:23:69.19:926,69,0	1/1:0,20:20:60.20:837,60,0	1/1:0,17:17:48.16:670,48,0	1/1:0,14:14:36.12:502,36,0	1/1:0,14:14:36.12:503,36,0	0/0:21,0:21:60.19:0,60,915	1/1:0,11:11:33.11:461,33,0	1/1:0,12:12:27.09:377,27,0	1/1:1,9:10:30.09:402,30,0	1/1:0,20:20:60.16:815,60,0	1/1:0,8:8:24.08:335,24,0	1/1:1,9:9:24.08:335,24,0	1/1:0,23:23:69.23:963,69,0	1/1:0,12:12:36.12:502,36,0	1/1:0,13:13:33.11:461,33,0	1/1:0,8:8:24.08:335,24,0	1/1:0,15:15:45.15:628,45,0	1/1:0,25:25:75.21:1025,75,0	1/1:0,14:14:42.14:586,42,0
chr10	26074362	.	C	CA	4317.43	PASS	AB=0.633;AC=37;AF=0.712;AN=52;BaseQRankSum=6.125;DP=187;FS=21.700;HRun=0;HaplotypeScore=97.2627;InbreedingCoeff=0.4208;MQ=35.22;MQ0=11;MQRankSum=-2.537;QD=33.47;ReadPosRankSum=2.705;VQSLOD=3.4078;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:3,4:7:39.20:202,0,39	1/1:2,2:4:12.04:166,12,0	./.	0/0:5,0:1:3.01:0,3,38	1/1:2,4:5:9.02:122,9,0	1/1:2,8:10:16.89:379,17,0	1/1:1,4:4:12.04:180,12,0	0/0:18,0:13:39.13:0,39,540	0/1:2,4:5:26.76:166,0,27	1/1:0,3:3:9.03:137,9,0	1/1:2,9:10:30.10:434,30,0	1/1:0,3:3:9.03:135,9,0	1/1:0,3:3:9.03:135,9,0	./.	0/0:18,0:18:45.56:0,46,566	1/1:1,4:5:15.03:204,15,0	0/0:11,0:11:29.10:0,29,356	0/0:5,0:5:14.84:0,15,134	1/1:4,2:4:6.83:109,7,0	0/1:1,3:4:29.72:123,0,30	1/1:3,2:3:6.02:88,6,0	0/1:5,7:12:5.72:404,0,6	1/1:2,4:5:12.04:179,12,0	0/1:5,2:8:57.17:57,0,72	1/1:1,3:4:12.03:160,12,0	1/1:0,4:4:12.04:180,12,0	1/1:1,9:10:30.10:440,30,0	1/1:0,7:7:21.07:316,21,0
chr10	26074374	.	C	CA	128.81	PASS	AB=0.940;AC=5;AF=0.096;AN=52;BaseQRankSum=2.878;DP=312;FS=0.859;HRun=0;HaplotypeScore=212.6470;InbreedingCoeff=-0.1327;MQ=36.14;MQ0=9;MQRankSum=-2.241;QD=1.69;ReadPosRankSum=4.735;VQSLOD=2.6514;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:7.21:0,7,123	0/0:3,0:3:8.96:0,9,68	./.	./.	0/1:16,0:15:16.90:17,0,134	0/0:21,0:21:36.08:0,36,375	0/0:13,0:12:29.71:0,30,224	0/0:21,0:18:51.03:0,51,595	0/0:10,0:9:26.83:0,27,225	0/0:3,0:3:8.39:0,8,70	0/1:18,0:17:23.74:24,0,274	0/0:9,0:9:26.62:0,27,193	0/0:10,0:10:22.55:0,23,167	0/0:3,0:3:6.07:0,6,29	0/1:8,6:14:99:172,0,277	0/0:10,0:10:24.57:0,25,176	0/0:12,0:12:30.81:0,31,434	0/0:8,0:8:11.87:0,12,170	0/1:6,0:5:16.21:16,0,67	0/0:18,0:18:39.04:0,39,310	0/0:9,0:7:0.57:0,1,62	0/1:22,0:22:11.47:11,0,291	0/0:12,0:11:19.64:0,20,183	0/0:8,0:8:11.71:0,12,91	0/0:12,0:12:29.43:0,29,183	0/0:12,0:12:26.77:0,27,220	0/0:15,0:15:38.70:0,39,334	0/0:16,0:16:45.98:0,46,341
chr10	26074973	.	C	CT	13938.20	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-7.064;DP=442;FS=7.813;HRun=0;HaplotypeScore=41.4756;InbreedingCoeff=0.9577;MQ=69.16;MQ0=1;MQRankSum=-1.979;QD=34.25;ReadPosRankSum=3.536;VQSLOD=3.7705;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,17:21:54.12:748,54,0	1/1:0,6:6:18.06:263,18,0	0/0:14,0:11:17.71:0,18,249	0/0:10,0:10:13.11:0,13,270	1/1:0,17:17:39.06:544,39,0	1/1:1,22:22:57.19:833,57,0	1/1:0,7:7:12.04:176,12,0	1/1:3,26:31:68.29:794,68,0	1/1:0,7:7:21.07:305,21,0	1/1:1,19:20:60.17:812,60,0	1/1:0,17:17:48.16:701,48,0	1/1:0,8:8:24.08:350,24,0	1/1:0,18:18:27.09:394,27,0	1/1:0,18:17:45.15:658,45,0	0/0:11,0:11:33.08:0,33,425	1/1:0,17:17:42.14:611,42,0	1/1:0,22:22:48.14:676,48,0	1/1:0,17:17:42.14:597,42,0	1/1:0,15:15:42.08:538,42,0	1/1:0,20:20:39.13:571,39,0	1/1:1,13:14:30.10:439,30,0	1/1:0,13:13:20.88:307,21,0	1/1:1,10:11:21.07:307,21,0	1/1:0,5:4:12.04:176,12,0	1/1:0,12:12:27.09:395,27,0	1/1:0,26:26:75.19:990,75,0	1/1:0,28:27:81.01:1184,81,0	1/1:0,14:14:39.13:570,39,0
chr10	26076113	.	C	CA	16952.32	PASS	AB=1.000;AC=51;AF=0.911;AN=56;BaseQRankSum=7.743;DP=480;FS=9.278;HRun=0;HaplotypeScore=154.4192;InbreedingCoeff=0.8656;MQ=66.18;MQ0=0;MQRankSum=-6.455;QD=38.35;ReadPosRankSum=2.455;VQSLOD=3.1762;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,28:30:73.49:1150,73,0	1/1:0,14:14:30.10:478,30,0	0/0:19,0:19:47.44:0,47,664	0/1:11,0:11:2.27:2,0,299	1/1:1,19:20:27:430,27,0	1/1:0,15:13:36.04:543,36,0	1/1:1,17:18:54.07:803,54,0	1/1:1,14:15:45.15:718,45,0	1/1:1,15:14:38.87:586,39,0	1/1:2,21:23:59.75:936,60,0	1/1:1,18:19:45.15:718,45,0	1/1:1,15:16:42.14:671,42,0	1/1:0,6:6:18.06:287,18,0	1/1:0,10:10:24.01:353,24,0	0/0:19,0:19:57.17:0,57,767	1/1:1,16:14:42.14:670,42,0	1/1:1,18:19:51.17:814,51,0	1/1:1,12:13:26.92:431,27,0	1/1:1,13:12:36.09:528,36,0	1/1:3,25:28:78.27:1232,78,0	1/1:0,16:15:39.13:622,39,0	1/1:1,14:15:39.13:622,39,0	1/1:0,16:16:42.14:670,42,0	1/1:1,17:17:39.13:621,39,0	1/1:1,17:18:48.16:766,48,0	1/1:1,16:17:48.16:758,48,0	1/1:1,24:25:72.25:1149,72,0	1/1:0,11:11:27.05:393,27,0
chr10	26076783	.	AT	A	7923.46	PASS	AB=0.938;AC=54;AF=0.964;AN=56;BaseQRankSum=-4.293;DP=477;FS=2.218;HRun=12;HaplotypeScore=50.6070;InbreedingCoeff=0.2315;MQ=69.54;MQ0=1;MQRankSum=-3.691;QD=16.61;ReadPosRankSum=4.813;VQSLOD=5.7174;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,17:19:46.86:354,47,0	1/1:0,16:16:47.82:371,48,0	0/1:12,1:9:20.72:21,0,89	0/1:17,1:13:1.84:2,0,237	1/1:2,23:26:64.76:493,65,0	1/1:2,23:26:70.72:536,71,0	1/1:3,8:12:22:151,22,0	1/1:8,17:26:43.79:327,44,0	1/1:4,17:22:43.85:331,44,0	1/1:3,16:19:47.77:367,48,0	1/1:1,23:27:68.84:505,69,0	1/1:3,6:9:17.91:139,18,0	1/1:1,7:8:17.93:139,18,0	1/1:0,16:16:41.84:325,42,0	1/1:1,13:14:35.86:279,36,0	1/1:2,9:11:29.88:231,30,0	1/1:5,12:17:2.42:202,2,0	1/1:1,11:12:29.88:232,30,0	1/1:3,10:15:36.94:267,37,0	1/1:4,15:19:41.81:325,42,0	1/1:4,6:10:17.90:139,18,0	1/1:1,9:10:23.90:186,24,0	1/1:2,20:23:58.81:447,59,0	1/1:1,8:9:17.91:139,18,0	1/1:1,19:20:47.80:371,48,0	1/1:5,9:15:28.92:215,29,0	1/1:2,28:30:74.69:580,75,0	1/1:1,14:15:8.52:248,9,0
chr10	26077354	.	AACCACCACCACCACCACCACCACC	A	6256.21	PASS	AB=1.000;AC=50;AF=0.893;AN=56;BaseQRankSum=0.997;DP=357;FS=6.553;HRun=0;HaplotypeScore=261.7899;InbreedingCoeff=0.3180;MQ=69.71;MQ0=6;MQRankSum=0.185;QD=20.05;ReadPosRankSum=3.321;VQSLOD=2.8566;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:12,0:11:17.85:330,18,0	1/1:3,0:3:9.03:151,9,0	0/0:22,0:15:2.37:0,2,8	0/0:23,0:14:6.46:0,6,49	1/1:6,4:10:9.27:118,9,0	1/1:11,0:11:14.36:171,14,0	1/1:7,0:7:9.03:193,9,0	1/1:12,0:19:11.26:182,11,0	1/1:20,0:19:29.54:504,30,0	1/1:6,3:9:14.92:269,15,0	1/1:6,5:11:2.90:16,3,0	1/1:15,0:15:32.61:472,33,0	1/1:8,0:8:17.56:283,18,0	1/1:18,0:18:37.38:445,37,0	1/1:10,0:10:22.15:314,22,0	1/1:16,0:16:23.32:309,23,0	1/1:10,0:10:17.82:249,18,0	0/1:10,0:9:31.88:156,0,32	1/1:8,4:12:12.22:264,12,0	1/1:12,4:16:23.22:361,23,0	0/1:14,0:14:99:151,0,153	1/1:12,4:16:13.03:106,13,0	1/1:8,2:10:9.03:181,9,0	1/1:14,0:14:14.77:208,15,0	1/1:10,0:10:18.31:263,18,0	1/1:9,2:11:6.02:141,6,0	1/1:17,0:17:39.50:395,40,0	1/1:3,0:3:3:25,3,0
chr10	26077379	.	AC	A	1098.31	PASS	AB=0.790;AC=28;AF=0.500;AN=56;BaseQRankSum=6.731;DP=318;FS=0.567;HRun=2;HaplotypeScore=146.1100;InbreedingCoeff=-0.4351;MQ=38.82;MQ0=7;MQRankSum=-2.453;QD=3.99;ReadPosRankSum=7.790;VQSLOD=0.1191;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:8,1:8:16.85:37,0,17	1/1:2,1:3:8.22:59,8,0	0/0:8,0:3:3:0,3,27	0/0:16,0:6:9.48:0,9,97	0/1:12,2:13:3.19:3,0,68	0/1:10,3:13:36.03:36,0,144	0/1:13,0:13:6.91:7,0,278	0/0:11,0:11:13.38:0,13,136	0/1:10,5:14:99:115,0,134	0/1:4,4:8:30.29:30,0,33	0/1:7,1:8:12.99:13,0,34	0/1:9,7:16:25.23:130,0,25	0/1:7,5:12:37.84:38,0,173	0/1:9,9:18:77.81:96,0,78	0/1:11,5:16:84.96:85,0,227	0/1:7,6:13:99:112,0,116	0/1:12,0:14:36.07:54,0,36	0/0:8,0:7:9.84:0,10,108	0/1:6,1:7:15.91:25,0,16	0/1:4,5:9:1.60:33,0,2	0/1:12,3:15:7.31:7,0,99	0/1:6,5:11:14.92:15,0,27	1/1:5,3:8:3.17:22,3,0	1/1:11,3:14:3.52:25,4,0	0/1:7,4:11:42.64:43,0,75	0/1:4,0:4:28.87:29,0,68	1/1:10,11:21:37.94:229,38,0	0/1:2,1:3:12.30:12,0,73
chr10	26077382	.	ACCACCACCACC	A	5953.91	PASS	AB=0.857;AC=24;AF=0.429;AN=56;BaseQRankSum=10.150;DP=328;FS=18.091;HRun=0;HaplotypeScore=182.2833;InbreedingCoeff=-0.5991;MQ=37.40;MQ0=7;MQRankSum=-2.517;QD=21.73;ReadPosRankSum=10.690;VQSLOD=1.2209;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:9,1:9:77:116,0,77	0/1:3,0:3:7.42:47,0,7	0/0:7,0:2:5.68:0,6,40	0/0:15,0:4:6.02:0,6,78	0/1:14,1:14:60.52:130,0,61	0/1:12,3:15:99:206,0,149	0/0:13,0:13:31.15:0,31,194	0/0:14,0:14:32.76:0,33,195	0/1:11,4:14:99:316,0,118	0/1:8,1:9:52.57:172,0,53	0/1:7,1:8:14.77:73,0,15	0/1:12,5:17:41.78:492,0,42	0/1:10,2:12:86.03:293,0,86	0/1:11,8:19:99:763,0,103	0/1:12,4:16:99:384,0,122	0/1:7,5:12:36.81:443,0,37	0/1:15,0:15:37.84:213,0,38	0/1:8,0:7:6.09:6,0,117	0/1:6,0:6:46.78:47,0,106	0/1:8,3:11:47.34:320,0,47	0/1:13,2:15:50.72:51,0,63	0/1:7,4:11:21.18:309,0,21	0/1:9,0:9:19.60:150,0,20	0/1:13,2:15:17.80:159,0,18	0/1:7,4:11:82.81:286,0,83	0/0:5,0:5:14.21:0,14,79	1/1:10,9:19:35.91:904,36,0	0/1:2,1:3:49.55:75,0,50
chr10	26077397	.	ACCACC	A	4091.76	PASS	AB=0.930;AC=28;AF=0.500;AN=56;BaseQRankSum=7.019;DP=407;FS=5.539;HRun=0;HaplotypeScore=188.0813;InbreedingCoeff=-0.3758;MQ=37.33;MQ0=6;MQRankSum=-1.887;QD=11.66;ReadPosRankSum=2.079;VQSLOD=2.8133;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:11,0:11:67.56:68,0,90	0/1:1,1:2:9.23:35,0,9	0/0:14,0:7:17.92:0,18,208	0/0:13,0:7:16.77:0,17,221	0/1:20,1:20:29.30:170,0,29	0/1:16,0:16:80.50:91,0,80	0/1:12,0:12:14.36:14,0,77	0/0:26,0:26:34.90:0,35,291	0/1:13,1:13:56.30:193,0,56	0/1:18,3:21:75.58:124,0,76	0/1:17,0:17:6.57:172,0,7	1/1:14,2:16:12.47:328,12,0	0/1:8,3:11:27.54:182,0,28	0/1:18,1:19:34.41:463,0,34	0/1:15,2:17:55.92:244,0,56	0/1:10,1:11:1.27:273,0,1	0/1:10,1:12:4.77:137,0,5	0/0:3,0:3:4.93:0,5,23	0/1:16,1:17:20.43:20,0,174	1/1:14,2:16:7.03:278,7,0	0/1:18,0:19:9.01:9,0,34	0/1:12,1:13:1.42:185,0,1	1/1:13,3:16:2.26:232,2,0	0/1:14,1:15:21.66:109,0,22	0/1:14,0:14:43.05:197,0,43	0/1:15,0:15:11.15:11,0,61	1/1:22,1:23:31.18:516,31,0	0/1:3,0:3:21.60:43,0,22
chr10	26077406	.	A	ACAACAACAACAG	18580.48	PASS	AB=0.789;AC=50;AF=0.893;AN=56;BaseQRankSum=2.276;DP=480;FS=2.556;HRun=0;HaplotypeScore=217.6865;InbreedingCoeff=0.5066;MQ=44.62;MQ0=2;MQRankSum=-4.902;QD=42.13;ReadPosRankSum=3.935;VQSLOD=4.6778;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:5,10:19:10.28:255,10,0	1/1:2,0:2:3:91,3,0	0/0:21,0:14:30.87:0,31,647	0/0:18,0:12:26.83:0,27,476	1/1:22,0:22:42.61:1095,43,0	1/1:17,0:17:45.24:1220,45,0	1/1:15,0:15:39.13:1179,39,0	0/1:26,0:26:26.79:1450,0,27	1/1:16,0:15:38.26:810,38,0	1/1:30,0:30:74.95:1740,75,0	1/1:18,0:18:39.05:941,39,0	1/1:19,0:19:14.81:152,15,0	1/1:11,0:11:22.86:638,23,0	1/1:19,0:19:42.77:783,43,0	1/1:20,0:20:49.17:1212,49,0	1/1:11,0:11:27.66:669,28,0	1/1:4,0:16:10.90:154,11,0	1/1:6,0:6:17.92:372,18,0	1/1:19,0:19:28.48:589,28,0	1/1:17,0:17:27.80:683,28,0	0/1:7,0:26:81.85:308,0,82	1/1:14,0:14:6.32:248,6,0	1/1:16,0:16:33.10:1002,33,0	1/1:5,9:17:6.90:167,7,0	1/1:18,0:18:43.70:1134,44,0	1/1:18,0:18:48.15:1301,48,0	1/1:25,0:25:22.65:218,23,0	1/1:3,0:3:8.95:169,9,0
chr10	26077407	.	C	CAGC	8187.92	PASS	AB=1.000;AC=47;AF=0.839;AN=56;BaseQRankSum=5.251;DP=481;FS=0.572;HRun=0;HaplotypeScore=177.5683;InbreedingCoeff=0.2745;MQ=46.25;MQ0=2;MQRankSum=-1.334;QD=18.65;ReadPosRankSum=6.997;VQSLOD=4.5246;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:18,0:18:39.49:59,0,39	1/1:2,0:2:2.89:36,3,0	0/0:23,0:16:38.53:0,39,465	0/0:19,0:13:27.38:0,27,282	1/1:22,0:22:25:467,25,0	1/1:18,0:18:47.70:513,48,0	1/1:15,0:15:39.12:497,39,0	0/1:26,0:26:84.16:552,0,84	1/1:16,0:15:41.34:451,41,0	1/1:30,0:30:51.02:876,51,0	1/1:19,0:19:38.82:426,39,0	1/1:19,0:19:16.92:117,17,0	1/1:11,0:11:23.70:255,24,0	1/1:19,0:19:31.26:388,31,0	1/1:21,0:21:36.78:597,37,0	1/1:11,0:11:29.29:272,29,0	1/1:16,0:16:2.70:58,3,0	0/1:7,0:6:3.08:121,0,3	0/1:19,0:19:88.18:189,0,88	1/1:17,0:17:32.53:324,33,0	0/1:25,0:25:46.15:97,0,46	1/1:13,0:13:4.96:140,5,0	1/1:15,0:15:32.94:392,33,0	1/1:15,0:15:7.24:92,7,0	1/1:18,0:18:40.63:464,41,0	1/1:18,0:18:41.79:516,42,0	1/1:13,12:26:18.07:192,18,0	1/1:3,0:3:8.96:96,9,0
chr10	26077408	.	A	AGCA	8187.92	PASS	AB=1.000;AC=47;AF=0.839;AN=56;BaseQRankSum=5.251;DP=484;FS=0.572;HRun=0;HaplotypeScore=177.9707;InbreedingCoeff=0.2745;MQ=46.32;MQ0=2;MQRankSum=-3.416;QD=18.52;ReadPosRankSum=7.212;VQSLOD=4.4853;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:18,0:18:39.49:59,0,39	1/1:2,0:2:2.89:36,3,0	0/0:23,0:16:38.53:0,39,465	0/0:19,0:13:27.38:0,27,282	1/1:22,0:22:25:467,25,0	1/1:19,0:19:47.70:513,48,0	1/1:15,0:15:39.12:497,39,0	0/1:28,0:28:84.16:552,0,84	1/1:16,0:15:41.34:451,41,0	1/1:30,0:30:51.02:876,51,0	1/1:19,0:19:38.82:426,39,0	1/1:7,11:19:16.92:117,17,0	1/1:11,0:11:23.70:255,24,0	1/1:19,0:19:31.26:388,31,0	1/1:21,0:21:36.78:597,37,0	1/1:11,0:11:29.29:272,29,0	1/1:17,0:17:2.70:58,3,0	0/1:7,0:6:3.08:121,0,3	0/1:19,0:19:88.18:189,0,88	1/1:16,0:16:32.53:324,33,0	0/1:25,0:25:46.15:97,0,46	1/1:13,0:13:4.96:140,5,0	1/1:15,0:15:32.94:392,33,0	1/1:15,0:15:7.24:92,7,0	1/1:18,0:18:40.63:464,41,0	1/1:18,0:18:41.79:516,42,0	1/1:26,0:26:18.07:192,18,0	1/1:3,0:3:8.96:96,9,0
chr10	26077677	.	A	AT	1388.78	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-9.438;DP=502;FS=1.920;HRun=9;HaplotypeScore=51.1490;InbreedingCoeff=0.9809;MQ=70.43;MQ0=0;MQRankSum=0.904;QD=21.37;ReadPosRankSum=-2.000;VQSLOD=3.4389;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:20:50.02:0,50,423	0/0:9,0:9:23.99:0,24,208	0/0:14,0:14:24.14:0,24,154	0/0:12,0:9:22.95:0,23,173	0/0:24,0:24:59.96:0,60,516	0/0:15,0:15:41.99:0,42,364	0/0:13,0:13:29.93:0,30,250	1/1:13,26:39:81.18:883,81,0	0/0:18,0:18:53.99:0,54,469	0/0:14,0:14:29.99:0,30,260	0/0:15,0:15:35.95:0,36,305	0/0:9,0:10:29.02:0,29,237	0/0:10,0:11:32:0,32,261	0/0:16,0:16:35.98:0,36,312	0/0:21,0:21:56.97:0,57,495	0/0:15,0:15:35.99:0,36,312	1/1:4,22:26:57.15:628,57,0	0/0:13,0:13:16.11:0,16,220	0/0:13,0:13:26.99:0,27,234	0/0:37,1:39:73.81:0,74,854	0/0:11,0:11:32.98:0,33,282	0/0:17,0:17:47.98:0,48,417	0/0:22,0:22:47.97:0,48,417	0/0:20,1:21:23.77:0,24,429	0/0:21,0:21:47.99:0,48,416	0/0:18,0:18:17.85:0,18,378	0/0:22,0:21:53.99:0,54,469	0/0:12,0:12:20.99:0,21,182
chr10	26077798	.	G	GT	16517.22	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-7.789;DP=518;FS=0.000;HRun=5;HaplotypeScore=45.3577;InbreedingCoeff=0.9821;MQ=85.38;MQ0=0;MQRankSum=-8.390;QD=33.99;ReadPosRankSum=3.999;VQSLOD=4.7745;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,30:32:81.26:1066,81,0	1/1:1,10:11:30.05:375,30,0	0/0:14,0:14:33.06:0,33,342	0/0:18,0:18:32.17:0,32,398	1/1:2,25:27:66.14:830,66,0	1/1:0,30:30:84.27:1105,84,0	1/1:3,10:13:21.07:276,21,0	1/1:3,28:31:84.25:1077,84,0	1/1:3,18:21:48.16:632,48,0	1/1:1,20:21:60.17:760,60,0	1/1:2,27:29:81.26:1066,81,0	1/1:0,11:11:30.10:395,30,0	1/1:1,9:10:27.09:355,27,0	1/1:1,24:25:66.21:860,66,0	1/1:2,22:24:63.20:829,63,0	1/1:1,10:11:27.09:355,27,0	1/1:0,8:8:24.08:316,24,0	1/1:1,6:8:18.06:237,18,0	1/1:0,9:9:27.09:355,27,0	1/1:1,18:19:51.06:631,51,0	1/1:1,11:12:33.11:428,33,0	1/1:2,11:13:33.11:434,33,0	1/1:0,19:19:48.16:632,48,0	1/1:1,28:29:78.25:1026,78,0	1/1:1,14:15:38.99:470,39,0	1/1:1,24:25:72.23:947,72,0	1/1:3,24:26:66.21:863,66,0	1/1:0,6:6:15.05:197,15,0
chr10	26079054	.	C	CTA	28125.27	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=6.067;DP=560;FS=4.006;HRun=0;HaplotypeScore=140.7742;InbreedingCoeff=0.9872;MQ=83.46;MQ0=0;MQRankSum=-7.822;QD=56.82;ReadPosRankSum=4.329;VQSLOD=4.7575;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,14:16:42.14:853,42,0	1/1:1,6:7:18.06:365,18,0	0/0:22,0:22:58.74:0,59,874	0/0:17,0:17:45.08:0,45,665	1/1:3,20:24:57.20:1157,57,0	1/1:2,28:30:87.30:1761,87,0	1/1:1,15:16:45.15:915,45,0	1/1:3,25:30:84.26:1615,84,0	1/1:1,17:18:54.19:1097,54,0	1/1:4,26:30:90.31:1785,90,0	1/1:3,24:27:72.20:1421,72,0	1/1:0,19:19:57.20:1158,57,0	1/1:1,17:18:51.18:1035,51,0	1/1:0,18:19:54.19:1097,54,0	0/0:26,0:26:78.25:0,78,1233	1/1:0,23:23:69.24:1402,69,0	1/1:0,12:12:36.12:732,36,0	1/1:2,7:9:21.07:425,21,0	1/1:1,14:16:45.15:914,45,0	1/1:1,23:25:66.23:1341,66,0	1/1:1,14:15:42.14:853,42,0	1/1:1,23:25:69.24:1400,69,0	1/1:0,17:18:51.18:1035,51,0	1/1:1,6:7:18.06:366,18,0	1/1:0,22:23:66.23:1341,66,0	1/1:3,27:30:90.26:1743,90,0	1/1:0,33:33:99:2010,99,0	1/1:0,5:5:15.05:305,15,0
chr10	26079367	.	GT	G	9855.49	PASS	AB=0.591;AC=49;AF=0.875;AN=56;BaseQRankSum=-3.493;DP=530;FS=19.052;HRun=10;HaplotypeScore=74.7312;InbreedingCoeff=0.7226;MQ=74.46;MQ0=0;MQRankSum=-3.877;QD=20.32;ReadPosRankSum=4.284;VQSLOD=3.9782;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,12:17:2.84:253,3,0	1/1:0,9:9:26.99:234,27,0	0/0:15,1:17:2.86:0,3,210	0/0:8,0:8:12.34:0,12,114	1/1:1,23:24:62.97:547,63,0	1/1:2,18:20:44.97:391,45,0	1/1:1,12:13:32.99:286,33,0	1/1:6,23:29:65.81:550,66,0	1/1:4,13:17:38.96:339,39,0	1/1:7,18:25:53.91:454,54,0	1/1:3,25:28:35.79:540,36,0	1/1:4,18:22:53.65:464,54,0	1/1:4,21:25:62.97:547,63,0	1/1:3,18:21:47.97:417,48,0	0/0:18,1:20:24.84:0,25,447	1/1:1,16:17:41.99:365,42,0	0/1:4,9:13:6.20:181,0,6	1/1:1,5:6:12:104,12,0	1/1:3,20:23:56.98:495,57,0	1/1:4,29:33:83.87:719,84,0	1/1:0,11:11:32.99:286,33,0	1/1:3,19:22:53.97:469,54,0	1/1:3,19:23:32.51:425,33,0	1/1:2,15:17:41.98:365,42,0	1/1:2,17:19:44.99:391,45,0	1/1:0,18:17:50.99:443,51,0	1/1:5,22:27:29.79:487,30,0	1/1:2,4:6:12:104,12,0
chr10	26080118	.	T	TA	15380.63	PASS	AB=0.900;AC=53;AF=0.946;AN=56;BaseQRankSum=-6.565;DP=590;FS=2.131;HRun=8;HaplotypeScore=59.7603;InbreedingCoeff=0.6653;MQ=66.19;MQ0=1;MQRankSum=-3.361;QD=27.13;ReadPosRankSum=3.616;VQSLOD=5.4843;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,29:34:84.25:967,84,0	1/1:1,5:6:15.04:173,15,0	0/1:8,0:8:8.41:8,0,69	0/0:23,0:19:34.72:0,35,264	1/1:4,30:34:81.24:935,81,0	1/1:3,19:22:20.68:492,21,0	1/1:1,11:12:30.09:346,30,0	1/1:7,22:29:63.19:727,63,0	1/1:3,22:25:57.16:648,57,0	1/1:0,27:27:81.24:932,81,0	1/1:3,20:23:57.17:655,57,0	1/1:3,16:19:39.12:450,39,0	1/1:3,11:14:30.09:346,30,0	1/1:1,15:16:45.13:519,45,0	1/1:1,19:20:45.13:519,45,0	1/1:1,4:5:9.03:104,9,0	1/1:2,20:22:60.18:692,60,0	1/1:3,16:19:39.12:449,39,0	1/1:5,28:32:84.24:960,84,0	1/1:6,27:33:81.21:920,81,0	1/1:1,8:9:24.07:277,24,0	1/1:2,10:12:24.07:277,24,0	1/1:7,24:31:75.20:852,75,0	1/1:1,16:17:39.12:450,39,0	1/1:2,20:22:48.14:554,48,0	1/1:5,23:28:69.19:786,69,0	1/1:5,31:36:87.25:994,87,0	1/1:0,10:10:30.09:346,30,0
chr10	26080613	.	C	CA	20680.66	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-6.877;DP=657;FS=0.555;HRun=5;HaplotypeScore=75.5084;InbreedingCoeff=0.9614;MQ=77.92;MQ0=0;MQRankSum=-4.466;QD=34.58;ReadPosRankSum=3.360;VQSLOD=5.0544;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,53:56:99:2052,157,0	1/1:1,10:11:24.08:316,24,0	0/0:18,0:18:42.09:0,42,439	0/0:11,0:11:21.02:0,21,223	1/1:0,25:25:69.22:908,69,0	1/1:0,24:24:72.23:947,72,0	1/1:0,24:24:66.21:868,66,0	1/1:0,17:17:51.17:671,51,0	1/1:1,23:24:63.20:829,63,0	1/1:3,17:20:51.17:671,51,0	1/1:1,21:22:63.20:828,63,0	1/1:1,19:20:51.17:671,51,0	1/1:2,24:27:72.23:945,72,0	1/1:1,29:30:78.25:1026,78,0	0/0:30,0:30:78.18:0,78,831	1/1:2,18:20:54.18:711,54,0	1/1:0,31:31:84.27:1105,84,0	1/1:5,25:30:72.23:945,72,0	1/1:1,20:22:30.96:750,31,0	1/1:5,21:26:63.16:809,63,0	1/1:1,36:37:99:1306,101,0	1/1:2,20:22:58.96:736,59,0	1/1:4,17:21:57.10:707,57,0	1/1:0,27:27:75.24:987,75,0	1/1:6,19:25:48.16:632,48,0	1/1:1,14:16:45.15:589,45,0	1/1:2,17:19:45.15:592,45,0	1/1:1,1:2:6.02:79,6,0
chr10	26082478	.	G	GT	22311.15	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-8.224;DP=597;FS=5.598;HRun=2;HaplotypeScore=51.7713;InbreedingCoeff=0.9967;MQ=69.69;MQ0=0;MQRankSum=-7.789;QD=39.84;ReadPosRankSum=6.059;VQSLOD=4.6156;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,33:33:99:1426,99,0	1/1:0,7:7:21.07:302,21,0	0/0:20,0:20:54.15:0,54,645	0/0:17,0:17:41.85:0,42,475	1/1:0,25:25:72.24:1037,72,0	1/1:0,16:16:42.14:605,42,0	1/1:0,23:23:63.17:884,63,0	1/1:2,26:28:78.24:1087,78,0	1/1:0,18:18:51.17:734,51,0	1/1:2,27:29:81.27:1148,81,0	1/1:1,19:20:54.18:778,54,0	1/1:0,18:18:54.18:778,54,0	1/1:1,22:23:62.24:871,62,0	1/1:0,11:11:30.10:432,30,0	1/1:0,19:19:54.18:778,54,0	1/1:1,20:21:57.19:821,57,0	1/1:2,28:30:78.26:1123,78,0	1/1:2,16:18:51.17:734,51,0	1/1:2,16:18:54.18:773,54,0	1/1:0,25:25:69.23:993,69,0	1/1:1,23:24:60.20:864,60,0	1/1:1,23:24:60.20:864,60,0	1/1:1,18:19:54.18:777,54,0	1/1:1,19:20:60.19:849,60,0	1/1:1,22:23:60.20:864,60,0	1/1:0,30:30:87.29:1253,87,0	1/1:0,29:29:84.28:1209,84,0	1/1:1,8:9:24.54:328,25,0
chr10	26083303	.	C	CT	14701.50	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-5.533;DP=620;FS=1.004;HRun=8;HaplotypeScore=64.0178;InbreedingCoeff=0.8592;MQ=67.94;MQ0=5;MQRankSum=-1.878;QD=26.30;ReadPosRankSum=3.904;VQSLOD=5.5009;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,19:23:48.08:536,48,0	1/1:3,12:15:24.07:277,24,0	0/0:28,0:14:1.32:0,1,107	0/0:33,0:17:16.57:0,17,174	1/1:5,35:40:96.28:1104,96,0	1/1:3,21:24:54.16:623,54,0	1/1:2,15:17:39.12:450,39,0	1/1:9,21:29:35.67:635,36,0	1/1:5,10:15:27.08:306,27,0	1/1:2,17:19:48.13:546,48,0	1/1:3,30:33:93.15:1025,93,0	1/1:3,13:16:33.10:381,33,0	1/1:4,16:21:44.96:497,45,0	1/1:2,10:12:30.09:346,30,0	1/1:2,15:17:34.34:384,34,0	1/1:0,20:20:45.13:519,45,0	1/1:6,20:26:57.15:645,57,0	1/1:2,17:19:23.69:526,24,0	1/1:8,15:23:48.14:550,48,0	1/1:4,27:31:78.09:850,78,0	1/1:1,8:9:24.07:277,24,0	1/1:1,13:14:36.11:415,36,0	1/1:4,24:28:69.21:796,69,0	1/1:1,11:12:30.09:346,30,0	1/1:5,16:21:42.12:485,42,0	1/1:2,27:29:81.24:934,81,0	1/1:5,31:36:87.26:1004,87,0	1/1:2,7:9:21.06:242,21,0
chr10	26085995	.	AT	A	4578.22	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=3.731;DP=266;FS=5.304;HRun=7;HaplotypeScore=38.2354;InbreedingCoeff=0.8561;MQ=52.61;MQ0=1;MQRankSum=-2.864;QD=22.12;ReadPosRankSum=4.312;VQSLOD=4.1560;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,5:6:15.03:153,15,0	1/1:1,4:5:12.03:122,12,0	0/0:12,0:10:30.06:0,30,351	0/0:4,0:1:3.01:0,3,38	1/1:2,11:13:30.06:305,30,0	1/1:0,8:8:21.04:214,21,0	1/1:3,11:14:33.07:337,33,0	0/0:23,0:23:54.16:0,54,662	1/1:1,5:6:15.03:153,15,0	1/1:2,11:13:33.07:336,33,0	1/1:7,9:16:27.06:275,27,0	1/1:2,10:12:21.04:214,21,0	1/1:1,8:9:24.05:245,24,0	1/1:0,7:7:15.03:153,15,0	0/0:9,0:8:18.02:0,18,208	1/1:0,5:5:9.02:92,9,0	0/0:11,0:11:21.02:0,21,246	1/1:1,7:8:21.05:214,21,0	1/1:0,10:10:30.04:298,30,0	1/1:2,7:9:21.05:214,21,0	1/1:1,6:7:15.03:153,15,0	1/1:6,5:11:12.02:122,12,0	1/1:0,9:9:21.04:214,21,0	1/1:0,3:3:3:31,3,0	1/1:6,8:14:21.05:214,21,0	1/1:1,6:7:18.04:184,18,0	1/1:1,8:9:24.05:245,24,0	1/1:2,4:6:9.02:92,9,0
chr10	26086573	.	G	GA	11492.24	PASS	AB=0.628;AC=42;AF=0.750;AN=56;BaseQRankSum=-14.470;DP=445;FS=55.595;HRun=1;HaplotypeScore=109.8697;InbreedingCoeff=-0.3345;MQ=38.13;MQ0=0;MQRankSum=2.091;QD=25.83;ReadPosRankSum=-0.565;VQSLOD=0.7291;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:4,17:21:6.54:570,0,7	0/1:2,3:5:21.59:77,0,22	0/1:3,2:5:26.59:158,0,27	0/1:0,0:2:6.54:31,0,7	0/1:11,12:24:41.34:217,0,41	0/1:5,14:19:19.25:473,0,19	0/1:1,2:3:8.36:81,0,8	1/1:2,13:15:25.34:483,25,0	1/1:0,11:11:27.09:401,27,0	0/1:5,9:14:15.58:352,0,16	0/1:17,16:32:47.37:549,0,47	1/1:1,11:13:22.65:471,23,0	1/1:2,11:14:27.37:507,27,0	1/1:2,12:14:23.81:465,24,0	0/1:7,15:22:9.99:605,0,10	1/1:3,17:20:1.80:543,2,0	1/1:3,14:17:7.67:500,8,0	1/1:0,7:7:18.06:264,18,0	1/1:3,3:5:11.51:145,12,0	1/1:9,24:33:31.80:882,32,0	1/1:1,7:9:23.36:307,23,0	0/1:10,12:22:5.89:446,0,6	0/1:9,15:24:34.41:585,0,34	1/1:1,8:9:10.67:215,11,0	1/1:4,19:23:8.02:692,8,0	0/1:11,17:28:72.31:681,0,72	0/1:8,14:22:26.13:522,0,26	1/1:0,6:6:18.06:269,18,0
chr10	26086577	.	T	TCC	3446.54	PASS	AB=0.811;AC=21;AF=0.375;AN=56;BaseQRankSum=-10.770;DP=478;FS=80.367;HRun=0;HaplotypeScore=151.4064;InbreedingCoeff=-0.6043;MQ=40.84;MQ0=0;MQRankSum=-7.526;QD=8.23;ReadPosRankSum=2.554;VQSLOD=-0.0234;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:19,4:23:99:152,0,497	0/1:3,2:5:68.80:104,0,69	0/0:9,0:6:21.02:0,21,256	0/0:2,0:2:5.75:0,6,39	0/1:15,11:26:99:112,0,266	0/1:16,4:20:99:190,0,345	0/1:4,1:5:47.68:48,0,77	0/1:17,1:17:14.68:15,0,458	0/0:13,0:13:33.10:0,33,400	0/1:9,5:14:99:254,0,280	0/1:18,17:34:99:331,0,439	0/1:12,1:13:22.29:22,0,320	0/1:13,2:15:23.02:23,0,367	0/1:14,2:16:26.87:27,0,315	0/1:16,6:22:99:213,0,460	0/1:18,3:21:99:121,0,464	0/1:17,3:20:99:115,0,431	0/0:9,0:9:21.06:0,21,247	0/0:8,0:7:20.98:0,21,218	0/1:26,8:34:99:168,0,606	0/0:11,0:11:27.91:0,28,294	0/1:12,10:22:99:306,0,270	0/1:15,9:24:99:250,0,404	0/1:9,1:10:9.38:9,0,214	0/1:21,3:24:99:115,0,524	0/1:18,11:29:99:571,0,511	0/1:16,7:23:99:300,0,420	0/0:7,0:7:21.04:0,21,239
chr10	26087468	.	CAGACAGTTGGATCTTCCG	C	3430.16	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=8.089;DP=692;FS=0.818;HRun=0;HaplotypeScore=315.1971;InbreedingCoeff=0.9994;MQ=65.80;MQ0=2;MQRankSum=-7.297;QD=110.65;ReadPosRankSum=2.401;VQSLOD=3.0487;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,151,11838	0/0:11,0:11:33.11:0,33,2439	0/0:21,0:20:57.20:0,57,3788	0/0:19,0:17:47.24:0,47,2500	0/0:25,0:25:72.25:0,72,5764	0/0:23,0:23:69.24:0,69,5488	0/0:19,0:19:57.20:0,57,4415	0/0:18,0:18:54.18:0,54,3860	0/0:24,0:24:72.23:0,72,5657	0/0:27,0:27:78.26:0,78,5729	0/0:21,0:21:54.19:0,54,4459	0/0:24,0:24:72.23:0,72,5063	0/0:20,0:20:57.20:0,57,4538	0/0:18,0:18:51.18:0,51,3685	1/1:3,28:31:66.23:3430,66,0	0/0:29,0:29:87.30:0,87,7177	0/0:44,0:44:99:0,132,11088	0/0:16,0:16:45.15:0,45,3712	0/0:18,0:18:54.19:0,54,3745	0/0:24,0:24:69.24:0,69,5851	0/0:50,0:50:99:0,148,11605	0/0:32,0:32:93.32:0,93,7566	0/0:20,0:18:51.17:0,51,4333	0/0:25,0:25:72.25:0,72,6080	0/0:16,0:16:45.15:0,45,3731	0/0:28,0:28:84.29:0,84,6963	0/0:27,0:27:78.27:0,78,6694	0/0:11,0:11:33.11:0,33,2701
chr10	26088326	.	GGT	G	5614.65	PASS	AB=0.641;AC=45;AF=0.865;AN=52;BaseQRankSum=3.033;DP=561;FS=3.168;HRun=0;HaplotypeScore=78.2833;InbreedingCoeff=0.3965;MQ=60.42;MQ0=15;MQRankSum=3.804;QD=12.56;ReadPosRankSum=4.774;VQSLOD=4.6197;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:15,22:39:12.78:491,13,0	1/1:2,4:7:14.88:150,15,0	./.	./.	1/1:7,13:22:29.92:319,30,0	1/1:14,3:18:14.19:105,14,0	1/1:3,12:15:7.94:191,8,0	0/0:27,1:28:2.30:0,2,308	1/1:5,8:14:17.88:184,18,0	1/1:7,8:17:13.20:279,13,0	1/1:7,10:18:20.38:192,20,0	0/1:8,9:17:0.97:213,0,1	1/1:7,8:15:20.55:213,21,0	1/1:4,7:16:26.24:206,26,0	0/0:14,0:30:12.45:0,12,105	0/1:4,10:15:23.69:192,0,24	1/1:8,9:18:2.39:196,2,0	1/1:15,7:23:17.87:176,18,0	1/1:12,3:14:9.03:101,9,0	1/1:6,13:19:23.64:229,24,0	1/1:7,12:18:21.06:235,21,0	1/1:8,7:15:22.61:241,23,0	1/1:3,13:17:26.50:262,26,0	1/1:11,13:24:26.91:285,27,0	1/1:8,11:20:23.64:230,24,0	1/1:7,17:26:46.37:450,46,0	1/1:8,15:23:33.09:373,33,0	0/1:5,3:9:3.01:101,0,3
chr10	26088956	.	TGGAACACATTGAC	T	1912.02	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.795;DP=664;FS=0.911;HRun=0;HaplotypeScore=237.9674;InbreedingCoeff=0.9837;MQ=80.53;MQ0=1;MQRankSum=-6.173;QD=106.22;ReadPosRankSum=0.081;VQSLOD=3.2454;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,111,7090	0/0:10,0:10:30.10:0,30,1979	0/0:17,0:17:38.30:0,38,1907	0/0:21,0:20:54.13:0,54,2330	0/0:45,0:45:99:0,135,8542	0/0:35,0:35:99:0,105,6395	0/0:19,0:19:57.20:0,57,3516	0/0:22,0:22:66.20:0,66,3700	0/0:29,0:29:87.27:0,87,5435	0/0:31,0:31:93.31:0,93,5579	0/0:24,0:24:72.25:0,72,4822	0/0:16,0:16:45.15:0,45,2975	0/0:29,0:29:87.30:0,87,5698	0/0:23,0:23:69.24:0,69,4660	1/1:0,18:18:47.99:2007,48,0	0/0:33,0:33:99:0,99,6397	0/0:22,0:22:66.18:0,66,4027	0/0:6,0:6:18.06:0,18,1222	0/0:20,0:20:60.21:0,60,3553	0/0:35,0:35:99:0,105,6749	0/0:19,0:19:57.20:0,57,3680	0/0:22,0:22:66.23:0,66,4481	0/0:31,0:31:93.28:0,93,5512	0/0:19,0:19:57.20:0,57,3546	0/0:17,0:17:51.18:0,51,3467	0/0:19,0:19:54.18:0,54,3444	0/0:39,0:38:99:0,117,7823	0/0:6,0:6:18.06:0,18,1223
chr10	26089436	.	T	TA	18941.37	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=0.364;DP=556;FS=0.700;HRun=3;HaplotypeScore=78.3417;InbreedingCoeff=0.9961;MQ=85.77;MQ0=0;MQRankSum=-9.180;QD=36.36;ReadPosRankSum=5.389;VQSLOD=5.0756;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,12:14:21.07:294,21,0	1/1:0,16:16:45.15:630,45,0	0/0:18,0:18:48.14:0,48,565	0/0:17,0:17:42.07:0,42,487	1/1:2,29:31:84.24:1154,84,0	1/1:2,21:23:57.19:798,57,0	1/1:1,15:16:39.13:546,39,0	1/1:4,25:29:75.24:1034,75,0	1/1:0,16:16:45.15:630,45,0	1/1:2,24:26:69.19:926,69,0	1/1:1,23:24:69.19:944,69,0	1/1:2,11:13:27.09:378,27,0	1/1:1,16:17:42.14:588,42,0	1/1:0,19:19:48.16:672,48,0	1/1:1,19:20:57.19:798,57,0	1/1:2,12:14:33.11:462,33,0	1/1:2,24:26:69.23:966,69,0	1/1:2,17:19:51.17:714,51,0	1/1:4,16:20:54.16:726,54,0	1/1:0,26:26:78.26:1092,78,0	1/1:1,17:18:48.16:672,48,0	1/1:0,15:15:42.14:588,42,0	1/1:1,22:23:60.20:840,60,0	1/1:1,10:11:24.08:336,24,0	1/1:1,22:23:63.21:881,63,0	1/1:2,20:22:60.20:841,60,0	1/1:1,23:24:66.16:885,66,0	1/1:0,16:16:39.13:546,39,0
chr10	26089722	.	A	AT	14516.87	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-8.150;DP=531;FS=3.227;HRun=8;HaplotypeScore=45.5801;InbreedingCoeff=0.9111;MQ=71.35;MQ0=0;MQRankSum=-2.486;QD=29.33;ReadPosRankSum=0.384;VQSLOD=4.9379;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,13:15:39.12:450,39,0	1/1:1,12:13:36.11:415,36,0	0/0:9,0:9:18.01:0,18,165	0/0:5,0:5:14.12:0,14,101	1/1:4,32:36:93.28:1071,93,0	1/1:1,24:25:66.20:762,66,0	1/1:7,11:18:27.08:312,27,0	1/1:7,24:31:75.18:834,75,0	1/1:1,4:5:9.03:104,9,0	1/1:2,28:30:84.25:970,84,0	1/1:4,18:22:54.16:622,54,0	1/1:1,16:17:39.12:450,39,0	1/1:2,19:21:51.15:589,51,0	1/1:0,14:14:42.12:485,42,0	0/0:21,1:22:31.40:0,31,537	1/1:2,10:12:30.09:346,30,0	1/1:1,28:29:74.96:843,75,0	1/1:0,12:12:33.10:381,33,0	1/1:1,18:20:60.15:679,60,0	1/1:3,25:28:75.18:850,75,0	1/1:0,12:12:36.11:415,36,0	1/1:2,18:20:51.11:574,51,0	1/1:0,25:25:69.21:796,69,0	1/1:1,11:12:30.09:346,30,0	1/1:3,16:19:45.13:519,45,0	1/1:2,21:23:38.73:699,39,0	1/1:1,29:29:84.25:969,84,0	1/1:2,4:6:3.01:35,3,0
chr10	26090385	.	CTT	C	23107.52	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-1.155;DP=602;FS=4.527;HRun=2;HaplotypeScore=79.3948;InbreedingCoeff=0.9975;MQ=81.12;MQ0=3;MQRankSum=-7.270;QD=42.01;ReadPosRankSum=4.672;VQSLOD=4.9884;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,16:16:39.13:635,39,0	1/1:0,7:7:21.07:342,21,0	0/0:20,0:20:56.86:0,57,1049	0/0:14,0:14:25.76:0,26,341	1/1:0,31:31:66.22:1063,66,0	1/1:0,30:30:78.27:1270,78,0	1/1:0,15:15:42.14:683,42,0	1/1:0,30:30:90.13:1351,90,0	1/1:0,26:25:66.23:1074,66,0	1/1:0,33:33:99:1591,99,0	1/1:0,13:13:36.12:584,36,0	1/1:0,18:18:39.13:635,39,0	1/1:0,20:20:57.19:929,57,0	1/1:1,21:21:54.18:878,54,0	0/0:18,0:18:54.19:0,54,1094	1/1:0,20:20:51.17:831,51,0	1/1:0,17:17:45.15:733,45,0	1/1:0,10:10:27.09:440,27,0	1/1:0,28:28:84.16:1231,84,0	1/1:0,29:29:75.26:1222,75,0	1/1:0,24:24:60.20:977,60,0	1/1:0,21:20:42.14:683,42,0	1/1:0,19:19:51.17:831,51,0	1/1:0,24:24:63.22:1027,63,0	1/1:0,16:16:39.13:635,39,0	1/1:0,29:29:87.27:1363,87,0	1/1:0,38:38:90.31:1465,90,0	1/1:0,14:14:39.13:634,39,0
chr10	26090521	.	A	ATTT	26062.37	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=3.151;DP=435;FS=0.000;HRun=2;HaplotypeScore=104.1382;InbreedingCoeff=0.9779;MQ=82.60;MQ0=0;MQRankSum=-8.938;QD=64.51;ReadPosRankSum=5.373;VQSLOD=4.6235;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,18:19:51.17:1141,51,0	1/1:0,7:7:18.06:425,18,0	0/0:17,0:17:44.25:0,44,761	0/0:14,0:14:39.08:0,39,629	1/1:0,30:30:87.30:2010,87,0	1/1:0,14:14:39.13:907,39,0	1/1:1,10:11:24.08:567,24,0	1/1:1,29:31:90.29:2058,90,0	1/1:0,17:18:45.15:1064,45,0	1/1:1,13:14:42.14:979,42,0	1/1:0,13:13:36.12:853,36,0	1/1:1,12:13:36.11:804,36,0	1/1:0,14:15:39.13:927,39,0	1/1:0,11:12:30.10:709,30,0	1/1:0,16:16:42.14:979,42,0	1/1:0,17:17:51.17:1182,51,0	1/1:0,10:10:27.09:633,27,0	1/1:0,6:6:18.06:425,18,0	1/1:0,10:10:30.10:701,30,0	1/1:1,22:25:69.22:1544,69,0	1/1:0,8:8:24.08:568,24,0	1/1:0,21:21:63.22:1459,63,0	1/1:0,19:19:57.20:1350,57,0	1/1:0,5:5:15.05:354,15,0	1/1:0,12:12:27.09:607,27,0	1/1:1,21:22:63.22:1474,63,0	1/1:0,27:28:78.27:1845,78,0	1/1:0,7:8:21.07:498,21,0
chr10	26090669	.	T	TGTGT	5360.38	PASS	AB=0.810;AC=52;AF=0.929;AN=56;BaseQRankSum=0.958;DP=455;FS=2.522;HRun=0;HaplotypeScore=129.1431;InbreedingCoeff=0.3903;MQ=46.76;MQ0=17;MQRankSum=-0.253;QD=12.16;ReadPosRankSum=2.893;VQSLOD=4.5099;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:13:10.59:192,11,0	1/1:9,0:9:9.05:146,9,0	0/1:24,0:14:2.83:3,0,80	0/0:14,0:7:5.59:0,6,82	1/1:26,0:25:12.04:190,12,0	1/1:8,0:8:15.05:248,15,0	1/1:15,0:12:6.02:85,6,0	1/1:23,0:23:18.51:238,19,0	1/1:13,0:13:18.06:269,18,0	1/1:15,0:14:18.42:215,18,0	1/1:19,0:17:12.04:200,12,0	1/1:10,0:10:6.02:69,6,0	1/1:15,0:15:36.08:522,36,0	0/1:7,9:18:0:1,0,0	1/1:25,0:25:35.32:584,35,0	1/1:11,0:10:8.97:110,9,0	1/1:14,0:14:24.05:346,24,0	1/1:2,0:1:3.01:48,3,0	1/1:18,0:16:12.04:203,12,0	1/1:16,0:16:7.22:132,7,0	1/1:10,0:8:6.49:94,6,0	1/1:24,0:24:15.92:219,16,0	1/1:19,0:19:12.03:168,12,0	1/1:19,0:17:12.88:158,13,0	1/1:13,0:12:3.01:51,3,0	1/1:22,0:20:29.05:362,29,0	1/1:23,0:22:29.93:368,30,0	1/1:15,0:15:12:142,12,0
chr10	26090720	.	AAG	A	4475.23	PASS	AB=0.733;AC=46;AF=0.885;AN=52;BaseQRankSum=-0.808;DP=504;FS=10.981;HRun=0;HaplotypeScore=130.1751;InbreedingCoeff=0.1812;MQ=49.64;MQ0=35;MQRankSum=2.240;QD=9.88;ReadPosRankSum=-1.409;VQSLOD=3.9171;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:16:29.75:286,30,0	1/1:7,5:11:5.29:53,5,0	./.	0/0:29,0:2:2.99:0,3,24	1/1:15,17:31:33.47:254,33,0	1/1:6,11:17:11.11:194,11,0	1/1:13,9:17:2.59:33,3,0	1/1:13,10:23:23.97:246,24,0	1/1:5,9:14:2.88:34,3,0	1/1:20,1:21:36.10:400,36,0	1/1:10,10:18:26.52:188,27,0	0/1:5,10:15:16.75:28,0,17	1/1:11,1:11:12.01:124,12,0	1/1:13,0:12:9.10:206,9,0	0/1:7,0:17:0.04:1,0,0	1/1:20,0:19:33.21:321,33,0	1/1:13,0:14:26.96:255,27,0	1/1:2,0:1:3.01:34,3,0	1/1:11,9:18:25.18:247,25,0	1/1:9,13:22:26.51:180,27,0	1/1:8,1:6:18.01:188,18,0	1/1:12,11:23:14.49:98,14,0	./.	1/1:18,1:15:22.42:183,22,0	0/1:11,8:17:11.09:59,0,11	1/1:10,13:22:31.76:356,32,0	1/1:23,3:25:41.07:367,41,0	0/1:18,0:15:3:142,0,3
chr10	26092281	.	CA	C	9500.10	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-2.140;DP=525;FS=0.916;HRun=8;HaplotypeScore=59.6351;InbreedingCoeff=0.9792;MQ=82.48;MQ0=0;MQRankSum=-4.095;QD=22.67;ReadPosRankSum=6.598;VQSLOD=4.6201;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,12:12:33.05:319,33,0	1/1:0,8:8:21.03:202,21,0	0/0:20,0:19:42.28:0,42,563	0/0:12,0:11:8.42:0,8,256	1/1:5,25:30:50.36:666,50,0	1/1:3,27:30:78.12:753,78,0	1/1:2,8:10:18.03:174,18,0	0/0:4,0:24:60.63:0,61,331	1/1:4,12:16:30.04:290,30,0	1/1:6,24:30:72.08:683,72,0	1/1:4,12:16:33.03:316,33,0	1/1:0,10:10:18.03:174,18,0	1/1:2,23:25:57.08:550,57,0	1/1:5,16:21:48.07:463,48,0	0/0:28,0:28:78.19:0,78,897	1/1:0,15:15:42.07:406,42,0	0/0:3,0:22:43.25:0,43,229	1/1:2,13:15:33.05:319,33,0	1/1:1,15:16:42.05:402,42,0	1/1:0,18:18:48.07:463,48,0	1/1:0,12:12:30.05:290,30,0	1/1:2,15:17:42.06:404,42,0	1/1:1,15:16:33.05:319,33,0	1/1:1,14:15:33.05:319,33,0	1/1:1,25:26:51.07:491,51,0	1/1:1,14:15:42.05:398,42,0	1/1:2,29:31:75.12:724,75,0	1/1:0,15:15:39.06:377,39,0
chr10	26092553	.	AT	A	13711.59	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-3.168;DP=554;FS=0.935;HRun=7;HaplotypeScore=57.8618;InbreedingCoeff=0.9918;MQ=60.11;MQ0=2;MQRankSum=1.599;QD=26.62;ReadPosRankSum=3.920;VQSLOD=5.4407;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,24:26:63.67:722,64,0	1/1:1,7:8:21.05:214,21,0	0/0:24,0:15:21.26:0,21,323	0/0:15,0:10:21.06:0,21,253	1/1:3,30:33:84.19:857,84,0	1/1:4,20:24:57.13:582,57,0	1/1:1,10:11:30.07:306,30,0	1/1:5,23:28:66.15:673,66,0	1/1:1,14:15:42.09:428,42,0	1/1:1,22:23:66.15:673,66,0	1/1:1,20:21:54.12:550,54,0	1/1:0,15:15:42.10:428,42,0	1/1:1,16:17:39.09:398,39,0	1/1:1,10:11:27.06:275,27,0	1/1:3,16:19:42.09:429,42,0	1/1:0,9:9:27.06:276,27,0	1/1:5,20:25:49.76:597,50,0	1/1:0,18:18:54.12:551,54,0	1/1:0,17:17:48.11:490,48,0	1/1:1,27:28:75.17:765,75,0	1/1:1,16:17:39.09:398,39,0	1/1:1,20:21:57.13:582,57,0	1/1:0,21:21:53.72:550,54,0	1/1:0,9:9:27.06:275,27,0	1/1:0,25:25:60.14:612,60,0	1/1:2,31:33:93.21:948,93,0	1/1:0,22:22:66.15:673,66,0	1/1:2,17:19:45.10:459,45,0
chr10	26094212	.	A	AG	8362.48	PASS	AB=0.627;AC=44;AF=0.786;AN=56;BaseQRankSum=-7.432;DP=533;FS=1.952;HRun=9;HaplotypeScore=116.3540;InbreedingCoeff=0.6127;MQ=69.99;MQ0=0;MQRankSum=-2.067;QD=18.06;ReadPosRankSum=1.111;VQSLOD=4.1221;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,29:34:69.18:755,69,0	1/1:0,3:3:3.01:33,3,0	0/0:14,0:12:17.97:0,18,156	0/0:18,0:16:24.20:0,24,178	1/1:8,11:19:24.06:265,24,0	1/1:5,11:16:27.07:298,27,0	0/1:8,19:27:4.41:416,0,4	0/0:1,0:16:25.33:0,25,74	1/1:8,14:23:39.11:431,39,0	1/1:7,4:11:12.03:133,12,0	1/1:5,4:9:6.02:66,6,0	1/1:8,18:26:48.13:529,48,0	1/1:1,20:21:48.13:531,48,0	1/1:3,16:19:36.10:398,36,0	1/1:7,22:29:40.13:671,40,0	0/1:8,8:16:1.99:208,0,2	0/0:2,0:19:34.62:0,35,102	1/1:3,10:14:30.07:332,30,0	1/1:2,9:11:24.06:265,24,0	1/1:10,12:22:23.98:238,24,0	0/1:12,18:31:9.91:356,0,10	1/1:10,9:19:24.06:265,24,0	0/1:9,12:21:2.06:196,0,2	1/1:4,19:24:30.93:552,31,0	1/1:1,11:12:30.08:331,30,0	1/1:10,12:22:33.07:354,33,0	1/1:7,19:26:32.08:571,32,0	1/1:1,7:8:15.03:166,15,0
chr10	26096412	.	A	AGTGTGTGTGT	9680.89	PASS	AB=0.690;AC=43;AF=0.796;AN=54;BaseQRankSum=-6.057;DP=631;FS=8.495;HRun=0;HaplotypeScore=196.5857;InbreedingCoeff=0.5653;MQ=58.12;MQ0=4;MQRankSum=-4.002;QD=21.51;ReadPosRankSum=-1.346;VQSLOD=2.5479;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:16,13:29:0:0,0,0	1/1:4,8:14:6.02:298,6,0	0/0:30,0:24:3.01:0,3,50	0/0:31,0:23:3.01:0,3,43	1/1:12,4:17:3.01:146,3,0	1/1:16,11:27:18.06:706,18,0	./.	0/0:15,0:26:27.51:0,28,430	1/1:12,7:21:6.02:298,6,0	1/1:33,2:34:42.11:1283,42,0	1/1:8,7:18:3.01:149,3,0	1/1:13,8:22:14.93:581,15,0	1/1:10,7:18:9.03:306,9,0	1/1:20,0:20:20.67:562,21,0	1/1:9,0:16:6.02:172,6,0	1/1:6,4:10:1.13:290,1,0	0/0:12,0:30:54.17:0,54,1180	1/1:5,0:5:3.01:130,3,0	1/1:11,0:10:15.05:333,15,0	1/1:14,13:30:24.08:1049,24,0	0/0:29,9:42:0.47:0,0,1	1/1:12,14:27:9.03:329,9,0	1/1:24,0:24:18.04:407,18,0	1/1:12,11:24:9.03:386,9,0	1/1:18,0:18:9.03:250,9,0	1/1:27,0:26:36.11:1127,36,0	1/1:14,9:23:11.75:544,12,0	1/1:6,1:13:9.03:333,9,0
chr10	26096573	.	T	TGAACTTG	31305	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-6.861;DP=517;FS=4.208;HRun=0;HaplotypeScore=105.9826;InbreedingCoeff=0.9683;MQ=82.14;MQ0=0;MQRankSum=-9.663;QD=66.89;ReadPosRankSum=2.508;VQSLOD=4.8828;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:9,23:33:57.13:1860,57,0	1/1:2,6:7:17.93:454,18,0	0/0:20,0:20:42.82:0,43,962	0/0:29,0:26:50.20:0,50,1126	1/1:1,12:18:27.31:622,27,0	1/1:1,10:13:27.09:1045,27,0	1/1:2,16:19:26.92:977,27,0	1/1:8,14:26:72.25:2222,72,0	1/1:1,12:18:15.05:602,15,0	1/1:2,17:21:57.15:2027,57,0	1/1:4,7:12:26.96:774,27,0	1/1:0,17:18:36.12:1422,36,0	1/1:3,16:22:45.09:1704,45,0	1/1:0,16:18:33.11:1289,33,0	1/1:1,11:13:21.07:834,21,0	1/1:2,12:14:33.11:1303,33,0	1/1:0,12:13:17.99:622,18,0	1/1:2,6:9:21:722,21,0	1/1:5,6:12:30.09:980,30,0	1/1:2,13:19:51.01:1538,51,0	1/1:7,16:28:42.01:1165,42,0	1/1:3,19:23:50.86:1605,51,0	1/1:1,13:17:27.48:1005,27,0	1/1:5,13:20:30.03:1057,30,0	1/1:5,13:21:42.08:1399,42,0	1/1:1,13:20:57.17:1860,57,0	1/1:2,14:21:42.14:1612,42,0	1/1:1,5:6:15.05:604,15,0
chr10	26097355	.	A	AT	1262.73	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-8.058;DP=552;FS=1.262;HRun=9;HaplotypeScore=61.1066;InbreedingCoeff=0.9243;MQ=75.57;MQ0=0;MQRankSum=-1.060;QD=24.28;ReadPosRankSum=-3.772;VQSLOD=2.9432;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:62.96:0,63,543	0/0:10,0:10:26.99:0,27,234	0/0:21,0:18:29.76:0,30,235	0/0:15,0:15:12.13:0,12,168	0/0:19,1:20:5.85:0,6,279	0/0:21,0:21:47.96:0,48,413	0/0:18,0:18:44.98:0,45,391	1/1:4,30:34:90.23:986,90,0	0/0:20,0:20:50.99:0,51,443	0/0:32,0:32:77.95:0,78,677	0/0:18,0:18:47.99:0,48,417	0/0:13,0:13:38.96:0,39,332	0/0:19,0:19:50.99:0,51,443	0/0:16,0:16:41.99:0,42,364	0/0:2,0:22:40.52:0,41,119	0/0:25,0:25:68.98:0,69,599	1/1:2,16:18:36.10:398,36,0	0/0:18,0:18:35.97:0,36,312	0/0:28,0:29:80:0,80,679	0/0:20,0:20:50.98:0,51,443	0/0:6,0:6:14.99:0,15,130	0/0:13,0:13:32.99:0,33,285	0/0:14,0:14:38.99:0,39,339	0/0:20,0:20:47.96:0,48,413	0/0:18,0:18:47.98:0,48,417	0/0:30,0:30:80.97:0,81,703	0/0:26,0:26:65.98:0,66,572	0/0:12,0:12:29.98:0,30,257
chr10	26097540	.	AT	A	7322.67	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-4.966;DP=351;FS=10.780;HRun=7;HaplotypeScore=38.1548;InbreedingCoeff=0.8112;MQ=57.12;MQ0=1;MQRankSum=2.464;QD=24.82;ReadPosRankSum=3.496;VQSLOD=4.3484;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,22:25:51.67:631,52,0	1/1:0,1:1:3.01:31,3,0	0/0:3,0:2:5.05:0,5,43	0/0:3,0:2:0.47:0,0,1	1/1:3,19:22:51.11:520,51,0	1/1:1,15:16:39.09:398,39,0	1/1:1,1:2:3:31,3,0	0/0:24,0:24:72.18:0,72,847	1/1:1,8:9:21.05:214,21,0	1/1:3,9:12:27.04:268,27,0	1/1:4,23:27:69.16:704,69,0	1/1:1,7:8:15.03:153,15,0	1/1:0,7:6:15.03:153,15,0	1/1:0,10:10:30.07:306,30,0	0/0:15,0:15:36.12:0,36,453	1/1:3,11:14:30.07:306,30,0	0/0:11,0:11:30.10:0,30,377	1/1:4,13:15:34.84:365,35,0	1/1:4,9:13:27.05:275,27,0	1/1:3,18:21:54.12:551,54,0	1/1:0,4:4:12.03:122,12,0	1/1:0,3:3:9.02:92,9,0	1/1:0,6:6:15.03:153,15,0	1/1:0,7:7:18.04:184,18,0	1/1:0,20:20:54.12:551,54,0	1/1:3,17:20:51.10:514,51,0	1/1:1,13:15:35.11:343,35,0	1/1:2,14:16:45.10:459,45,0
chr10	26098055	.	CT	C	301.70	PASS	AC=4;AF=0.087;AN=46;BaseQRankSum=-0.111;DP=212;FS=2.638;HRun=8;HaplotypeScore=27.6231;InbreedingCoeff=0.3634;MQ=70.79;MQ0=2;MQRankSum=-1.220;QD=8.38;ReadPosRankSum=-0.291;VQSLOD=-0.2740;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:7:15.05:0,15,180	./.	0/0:25,0:13:22.56:0,23,190	0/0:23,1:9:5.81:0,6,34	0/0:5,0:5:9.02:0,9,95	0/0:6,0:3:6.02:0,6,69	0/0:8,0:4:3.01:0,3,36	1/1:6,10:9:17.86:159,18,0	0/0:2,0:2:3:0,3,29	0/0:5,0:5:6.02:0,6,72	0/0:3,0:3:3.01:0,3,36	0/0:5,0:3:3.01:0,3,36	0/0:6,0:2:6.02:0,6,72	0/0:7,0:3:6.02:0,6,72	./.	0/0:9,0:3:3.01:0,3,36	1/1:6,14:14:27.02:254,27,0	0/0:4,0:3:6.01:0,6,63	0/0:13,0:12:27.06:0,27,311	0/0:5,0:5:12.03:0,12,136	0/0:3,0:3:3.01:0,3,36	./.	./.	0/0:2,0:2:3.01:0,3,36	./.	0/0:12,0:8:15.02:0,15,152	0/0:12,0:5:6.02:0,6,69	0/0:5,0:3:3:0,3,25
chr10	26098069	.	TGTTTTTG	T	1691.46	PASS	AB=1.000;AC=29;AF=0.906;AN=32;BaseQRankSum=-1.628;DP=196;FS=3.691;HRun=0;HaplotypeScore=34.3112;InbreedingCoeff=0.0853;MQ=64.85;MQ0=7;MQRankSum=-3.971;QD=12.72;ReadPosRankSum=1.750;VQSLOD=1.3014;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:6,3:5:6.02:88,6,0	./.	0/1:35,0:12:27.92:28,0,126	0/0:28,0:8:5.14:0,5,82	./.	1/1:2,3:2:3.01:71,3,0	1/1:1,3:1:3.01:57,3,0	1/1:6,5:5:5.99:50,6,0	1/1:0,1:1:3.01:69,3,0	./.	1/1:2,0:2:3.01:55,3,0	1/1:2,2:2:3.01:69,3,0	./.	./.	./.	./.	1/1:16,2:11:27.04:466,27,0	1/1:0,3:2:3.01:69,3,0	1/1:9,0:9:9.03:149,9,0	1/1:1,4:5:9.03:186,9,0	./.	./.	./.	1/1:3,0:2:6.02:95,6,0	./.	1/1:2,8:6:12.04:273,12,0	1/1:3,10:4:3.01:63,3,0	./.
chr10	26098075	.	TG	T	543.93	PASS	AB=0.931;AC=28;AF=0.875;AN=32;BaseQRankSum=-1.682;DP=171;FS=4.322;HRun=2;HaplotypeScore=32.2917;InbreedingCoeff=0.2644;MQ=62.83;MQ0=8;MQRankSum=-4.372;QD=4.61;ReadPosRankSum=2.739;VQSLOD=0.9725;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,2:3:6.02:68,6,0	./.	0/1:34,1:11:5.19:5,0,45	0/0:27,0:6:5.18:0,5,57	./.	1/1:4,0:1:2.37:8,2,0	1/1:4,1:1:3.01:39,3,0	0/1:7,1:2:0:0,0,0	1/1:1,0:1:2.37:8,2,0	./.	1/1:0,0:2:2.96:19,3,0	1/1:4,0:2:1.82:5,2,0	./.	./.	./.	./.	1/1:12,3:9:25.23:221,25,0	1/1:3,0:2:2.50:9,2,0	1/1:4,1:5:11.79:93,12,0	1/1:4,0:4:5.85:20,6,0	./.	./.	./.	1/1:1,2:2:5.97:57,6,0	./.	1/1:8,1:5:10.99:72,11,0	1/1:10,2:3:2.74:12,3,0	./.
chr10	26098101	.	T	TTTTG	2022.40	PASS	AC=30;AF=0.882;AN=34;BaseQRankSum=-1.125;DP=168;FS=16.888;HRun=0;HaplotypeScore=35.2354;InbreedingCoeff=0.3788;MQ=62.59;MQ0=3;MQRankSum=-2.712;QD=21.29;ReadPosRankSum=2.049;VQSLOD=1.5394;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,9:7:12.04:279,12,0	1/1:3,1:1:2.99:24,3,0	0/0:21,0:11:11.24:0,11,250	0/0:17,0:5:2.65:0,3,14	./.	./.	1/1:0,6:3:9.03:227,9,0	1/1:2,0:9:24.07:315,24,0	./.	1/1:6,0:3:8.99:75,9,0	./.	1/1:1,2:1:2.99:24,3,0	./.	./.	1/1:2,0:1:3.01:50,3,0	./.	1/1:5,0:9:21.06:248,21,0	1/1:2,1:2:3:26,3,0	1/1:2,3:6:15.04:338,15,0	1/1:0,2:2:6.01:92,6,0	./.	./.	./.	1/1:0,3:2:6.02:126,6,0	1/1:4,0:2:3.01:37,3,0	1/1:4,4:4:6.02:148,6,0	1/1:4,8:2:6.02:116,6,0	./.
chr10	26098149	.	TA	T	1094.04	PASS	AC=30;AF=0.750;AN=40;BaseQRankSum=-0.616;DP=135;FS=7.146;HRun=2;HaplotypeScore=28.5729;InbreedingCoeff=0.5173;MQ=73.35;MQ0=1;MQRankSum=0.418;QD=14.21;ReadPosRankSum=1.757;VQSLOD=2.5966;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:9,3:10:26.66:248,27,0	1/1:2,3:2:6.02:73,6,0	0/0:12,0:7:0.79:0,1,12	0/0:14,1:7:0.88:0,1,67	1/1:3,4:3:5.98:56,6,0	1/1:3,2:3:5.98:57,6,0	1/1:1,1:2:5.99:61,6,0	0/0:13,0:9:18.91:0,19,80	./.	1/1:5,2:5:15.05:188,15,0	1/1:4,1:4:8.81:54,9,0	1/1:2,0:2:6.02:74,6,0	1/1:3,2:3:5.88:52,6,0	1/1:1,0:1:3.01:38,3,0	0/0:2,0:1:2.80:0,3,13	./.	0/0:9,0:6:17.82:0,18,121	./.	1/1:1,2:3:9:88,9,0	./.	./.	./.	./.	./.	1/1:3,2:3:5.71:32,6,0	1/1:2,1:3:2.98:22,3,0	1/1:2,6:2:6.02:74,6,0	1/1:5,2:3:9.03:108,9,0
chr10	26098155	.	A	AT	1287.26	PASS	AC=36;AF=0.900;AN=40;BaseQRankSum=-3.152;DP=130;FS=2.117;HRun=6;HaplotypeScore=24.8080;InbreedingCoeff=0.3031;MQ=63.56;MQ0=1;MQRankSum=-2.821;QD=12.87;ReadPosRankSum=3.262;VQSLOD=0.8904;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:10,1:10:23.41:183,23,0	1/1:2,3:2:6.02:71,6,0	0/0:12,0:6:10.56:0,11,86	0/0:12,0:5:0.48:0,0,26	1/1:5,3:3:5.96:54,6,0	1/1:3,1:3:5.96:54,6,0	1/1:2,0:2:2.98:21,3,0	1/1:3,8:7:6.49:76,6,0	./.	1/1:5,2:5:15.05:182,15,0	1/1:4,1:4:8.76:52,9,0	1/1:2,0:2:6.02:72,6,0	1/1:4,2:3:5.85:50,6,0	1/1:1,0:1:3.01:36,3,0	1/1:1,1:1:3.01:38,3,0	./.	1/1:1,8:6:18.06:226,18,0	./.	1/1:2,1:3:5.98:47,6,0	./.	./.	./.	./.	./.	1/1:4,3:4:5.63:30,6,0	1/1:2,0:2:2.98:21,3,0	1/1:6,2:2:6.02:72,6,0	1/1:5,2:3:9.03:105,9,0
chr10	26099849	.	AT	A	782.06	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.569;DP=471;FS=16.231;HRun=7;HaplotypeScore=68.3990;InbreedingCoeff=0.9623;MQ=60.36;MQ0=14;MQRankSum=-3.138;QD=23.00;ReadPosRankSum=-2.476;VQSLOD=1.7126;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:45.14:0,45,566	0/0:7,0:7:15.05:0,15,188	0/0:13,0:10:23.94:0,24,269	0/0:9,0:5:15.04:0,15,171	0/0:33,0:30:84.27:0,84,1056	0/0:14,0:13:33.11:0,33,414	0/0:17,0:17:51.08:0,51,606	1/1:1,25:26:75.12:747,75,0	0/0:18,0:16:42.13:0,42,528	0/0:27,0:26:75.24:0,75,944	0/0:20,0:19:48.11:0,48,585	0/0:10,0:10:27.09:0,27,340	0/0:19,0:19:57.17:0,57,704	0/0:12,0:11:30.10:0,30,377	0/0:14,0:13:33.11:0,33,415	0/0:9,0:9:21.07:0,21,264	1/1:0,8:8:15.03:153,15,0	0/0:17,0:17:45.12:0,45,550	0/0:11,0:11:32.59:0,33,386	0/0:25,0:25:75.24:0,75,943	0/0:17,0:17:31.52:0,32,535	0/0:17,0:17:42.09:0,42,510	0/0:22,0:21:51.16:0,51,641	0/0:8,0:8:24.08:0,24,302	0/0:29,0:29:72.13:0,72,855	0/0:21,0:18:51.16:0,51,641	0/0:19,0:19:42.13:0,42,528	0/0:10,0:9:15.05:0,15,189
chr10	26099965	.	T	TA	12622.48	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-8.753;DP=552;FS=2.819;HRun=8;HaplotypeScore=61.4921;InbreedingCoeff=0.9856;MQ=75.61;MQ0=0;MQRankSum=-3.139;QD=27.26;ReadPosRankSum=5.740;VQSLOD=5.0569;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,23:26:57.17:658,57,0	1/1:2,10:12:24.07:277,24,0	0/0:20,0:19:34.65:0,35,258	0/0:12,0:12:29.20:0,29,257	1/1:3,30:33:87.20:980,87,0	1/1:3,15:18:33.10:381,33,0	1/1:2,15:17:39.12:450,39,0	0/0:38,0:38:95.94:0,96,851	1/1:1,25:26:72.21:831,72,0	1/1:3,21:24:63.16:707,63,0	1/1:1,30:32:90.06:1001,90,0	1/1:3,8:11:24.07:277,24,0	1/1:2,19:21:51.15:586,51,0	1/1:2,17:19:50.82:565,51,0	1/1:4,11:15:24.07:274,24,0	1/1:2,9:11:27.08:312,27,0	0/0:19,0:19:48:0,48,433	1/1:3,11:14:30.09:346,30,0	1/1:2,14:16:20.65:469,21,0	1/1:4,18:23:53.99:603,54,0	1/1:1,10:11:30.09:346,30,0	1/1:1,15:16:45.05:498,45,0	1/1:3,19:22:45.13:519,45,0	1/1:2,10:12:27.08:312,27,0	1/1:3,22:25:11.28:634,11,0	1/1:1,19:20:54.16:623,54,0	1/1:4,24:28:35.75:665,36,0	1/1:2,9:11:27.08:312,27,0
chr10	26100721	.	AT	A	1837.03	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.245;DP=589;FS=4.032;HRun=3;HaplotypeScore=54.6527;InbreedingCoeff=0.9218;MQ=78.85;MQ0=0;MQRankSum=0.780;QD=32.23;ReadPosRankSum=-1.375;VQSLOD=3.1380;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:75.23:0,75,1057	0/0:12,0:12:36.12:0,36,518	0/0:15,0:15:6.76:0,7,366	0/0:12,0:12:8.37:0,8,321	0/0:30,0:30:87.27:0,87,1216	0/0:29,0:29:87.29:0,87,1253	0/0:17,0:17:51.17:0,51,735	1/1:1,33:34:99:1215,99,0	0/0:16,0:16:48.15:0,48,673	0/0:25,0:25:72.23:0,72,1021	0/0:27,0:27:81.27:0,81,1166	0/0:11,0:11:33.11:0,33,473	0/0:28,0:28:81.27:0,81,1166	0/0:19,0:19:51.16:0,51,716	0/0:19,0:19:54.16:0,54,742	0/0:16,0:16:48.16:0,48,691	1/1:1,22:23:60.19:744,60,0	0/0:7,0:7:21.05:0,21,282	0/0:28,0:28:81.23:0,81,1107	0/0:32,0:32:93.30:0,93,1320	0/0:16,0:16:48.13:0,48,655	0/0:10,0:10:30.10:0,30,432	0/0:23,0:23:69.23:0,69,993	0/0:11,0:11:33.09:0,33,456	0/0:34,0:34:99:0,102,1454	0/0:23,0:23:69.23:0,69,994	0/0:30,0:29:90.30:0,90,1296	0/0:16,0:16:48.15:0,48,674
chr10	26101257	.	C	CA	6862.42	PASS	AB=0.875;AC=55;AF=0.982;AN=56;BaseQRankSum=3.058;DP=431;FS=11.036;HRun=0;HaplotypeScore=359.9381;InbreedingCoeff=-0.0249;MQ=56.67;MQ0=0;MQRankSum=-1.627;QD=15.92;ReadPosRankSum=2.765;VQSLOD=2.9120;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,22:24:66.95:379,67,0	1/1:1,5:6:14.72:92,15,0	1/1:5,5:11:5.06:229,5,0	0/1:6,1:7:22.83:49,0,23	1/1:6,11:17:32.03:186,32,0	1/1:2,17:19:53.81:324,54,0	1/1:0,4:4:11.04:55,11,0	1/1:6,16:22:65.30:482,65,0	1/1:2,16:18:52.20:317,52,0	1/1:3,18:21:43.94:427,44,0	1/1:0,19:18:48.17:241,48,0	1/1:3,16:19:52.65:313,53,0	1/1:7,5:12:27.58:151,28,0	1/1:2,14:16:44.25:233,44,0	1/1:4,20:24:66.95:397,67,0	1/1:6,25:31:87.82:559,88,0	1/1:3,6:9:20.28:132,20,0	1/1:1,5:6:17.01:109,17,0	1/1:5,6:11:32.33:243,32,0	1/1:0,24:24:64.28:358,64,0	1/1:3,5:8:12.24:65,12,0	1/1:3,11:13:33.89:206,34,0	1/1:5,17:22:51.95:252,52,0	1/1:1,11:12:19.68:99,20,0	1/1:3,15:18:49.53:291,50,0	1/1:4,13:17:49.70:377,50,0	1/1:4,14:18:43.95:276,44,0	1/1:0,2:2:2.97:20,3,0
chr10	26101485	.	G	GCACACACACACA	6407.11	PASS	AB=1.000;AC=47;AF=0.940;AN=50;BaseQRankSum=-1.803;DP=576;FS=0.000;HRun=0;HaplotypeScore=194.6637;InbreedingCoeff=0.0031;MQ=51.27;MQ0=16;MQRankSum=0.883;QD=13.90;ReadPosRankSum=0.982;VQSLOD=3.8014;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:41,0:40:27:467,27,0	1/1:8,0:8:6.02:188,6,0	./.	./.	1/1:17,0:16:0.32:125,0,0	1/1:21,0:20:6:74,6,0	1/1:26,0:23:19.62:405,20,0	1/1:26,0:26:25.58:465,26,0	1/1:5,4:12:2.67:168,3,0	1/1:15,0:15:5.38:63,5,0	1/1:15,0:14:2.75:110,3,0	1/1:7,0:15:6.02:173,6,0	1/1:12,0:12:11.94:307,12,0	1/1:6,1:14:5.68:289,6,0	1/1:17,0:29:6.02:150,6,0	1/1:19,0:18:6.47:130,6,0	1/1:7,6:20:3.48:168,3,0	0/1:17,0:17:23.23:471,0,23	1/1:17,0:16:12.32:177,12,0	1/1:20,1:19:6.01:198,6,0	1/1:25,0:23:11.60:314,12,0	0/0:12,0:11:0:0,0,0	./.	1/1:14,11:30:8.56:351,9,0	1/1:15,0:14:8.96:94,9,0	1/1:25,0:24:39.03:986,39,0	1/1:16,0:16:23.98:466,24,0	1/1:5,0:5:6.02:69,6,0
chr10	26102279	.	TA	T	850.56	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=4.984;DP=548;FS=8.325;HRun=11;HaplotypeScore=70.9884;InbreedingCoeff=0.7181;MQ=83.08;MQ0=4;MQRankSum=-1.226;QD=8.86;ReadPosRankSum=-0.740;VQSLOD=1.9256;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,1:31:59.55:0,60,827	0/0:5,0:5:15.04:0,15,160	0/0:32,0:23:34.85:0,35,282	0/1:25,0:17:2.49:2,0,154	0/0:31,2:33:31.90:0,32,734	0/0:21,2:23:10.85:0,11,513	0/0:15,0:16:20.44:0,20,403	1/1:7,25:33:61.95:571,62,0	0/0:13,1:14:14.34:0,14,336	0/0:24,0:24:57.61:0,58,603	0/0:19,1:20:29.48:0,29,502	0/0:16,1:17:20.46:0,20,408	0/0:14,0:14:33.07:0,33,344	0/0:11,0:11:2.79:0,3,203	1/1:7,0:19:5.70:45,6,0	0/0:9,0:9:27.07:0,27,287	1/1:7,12:19:44.92:367,45,0	0/0:12,0:12:27.04:0,27,278	0/0:11,0:12:26:0,26,277	0/0:26,0:27:41.35:0,41,608	0/0:6,0:6:6.02:0,6,64	0/0:14,0:14:39.01:0,39,395	0/0:27,1:28:47.49:0,47,679	0/0:14,0:14:33.07:0,33,345	0/0:10,0:10:27.05:0,27,276	0/0:23,1:24:35.49:0,35,571	0/0:43,0:43:99:0,111,1159	0/0:12,0:12:5.04:0,5,234
chr10	26103274	.	GA	G	12995.08	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-1.263;DP=574;FS=0.000;HRun=9;HaplotypeScore=57.2632;InbreedingCoeff=0.8965;MQ=74.21;MQ0=0;MQRankSum=-5.876;QD=23.58;ReadPosRankSum=4.553;VQSLOD=5.3453;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,21:23:25.35:487,25,0	1/1:0,13:13:36.02:330,36,0	0/0:14,0:13:29.97:0,30,310	0/0:8,0:9:3.03:0,3,83	1/1:3,31:34:87.03:796,87,0	1/1:0,16:16:48.03:439,48,0	1/1:3,17:20:48.02:439,48,0	1/1:5,20:25:56.76:521,57,0	1/1:1,20:21:54.03:494,54,0	1/1:2,35:37:99:961,105,0	1/1:2,19:21:54.02:494,54,0	1/1:0,6:6:18.01:165,18,0	1/1:2,17:19:48.01:439,48,0	1/1:2,17:19:48.02:439,48,0	1/1:2,23:25:69.03:631,69,0	1/1:1,16:17:42.02:384,42,0	1/1:1,23:24:60.03:549,60,0	1/1:0,9:9:24.01:220,24,0	1/1:1,18:19:54.02:490,54,0	1/1:5,38:43:99:988,108,0	1/1:3,16:19:42.02:384,42,0	1/1:2,20:22:54.02:494,54,0	1/1:1,22:23:63.03:577,63,0	1/1:1,18:19:47.91:439,48,0	1/1:2,20:22:60.03:549,60,0	1/1:3,18:21:54.02:494,54,0	1/1:0,18:18:54:488,54,0	1/1:3,13:16:33.01:302,33,0
chr10	26103572	.	C	CTA	1555.14	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-4.480;DP=632;FS=0.691;HRun=0;HaplotypeScore=90.7513;InbreedingCoeff=0.9918;MQ=90.52;MQ0=0;MQRankSum=-4.326;QD=43.20;ReadPosRankSum=0.550;VQSLOD=5.2124;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:48.16:0,48,687	0/0:14,0:14:42.14:0,42,602	0/0:24,0:24:68.73:0,69,883	0/0:27,0:27:69.19:0,69,942	0/0:27,0:27:75.23:0,75,1054	0/0:26,0:26:75.25:0,75,1074	0/0:18,0:18:45.15:0,45,645	0/0:34,0:34:93.30:0,93,1317	0/0:27,0:27:72.24:0,72,1032	0/0:28,0:28:81.27:0,81,1161	0/0:19,0:19:54.18:0,54,771	0/0:19,0:19:57.19:0,57,817	0/0:25,0:25:72.24:0,72,1030	0/0:25,0:25:63.20:0,63,884	1/1:0,36:36:90.31:1650,90,0	0/0:16,0:16:48.16:0,48,687	0/0:18,0:18:51.14:0,51,710	0/0:7,0:7:21.07:0,21,301	0/0:18,0:18:54.18:0,54,773	0/0:34,0:34:99:0,99,1419	0/0:13,0:13:36.12:0,36,516	0/0:29,0:29:78.25:0,78,1100	0/0:30,0:30:87.29:0,87,1244	0/0:19,0:19:54.18:0,54,774	0/0:23,0:23:60.19:0,60,842	0/0:25,0:25:75.25:0,75,1075	0/0:26,0:26:75.25:0,75,1075	0/0:7,0:7:21.07:0,21,301
chr10	26104479	.	G	GCCCC	5233.77	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=6.415;DP=358;FS=24.712;HRun=5;HaplotypeScore=88.1286;InbreedingCoeff=0.7394;MQ=73.99;MQ0=0;MQRankSum=-8.879;QD=19.03;ReadPosRankSum=-2.289;VQSLOD=0.3467;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:21,2:25:32.56:448,33,0	1/1:8,1:9:18.02:255,18,0	0/0:14,0:14:35.90:0,36,509	0/0:15,0:15:22.53:0,23,497	1/1:2,4:6:11.93:186,12,0	1/1:8,1:10:20.87:214,21,0	1/1:10,16:28:33.01:579,33,0	0/0:27,0:27:63.19:0,63,1008	1/1:10,2:13:35.88:449,36,0	1/1:8,0:8:11.99:159,12,0	1/1:7,0:7:8.77:96,9,0	1/1:4,15:19:5.55:96,6,0	1/1:2,5:8:12.04:235,12,0	1/1:1,7:9:12:230,12,0	1/1:9,0:9:12.03:176,12,0	1/1:2,9:14:24.08:547,24,0	0/0:27,0:27:81.26:0,81,1327	1/1:15,2:19:39.01:501,39,0	1/1:5,0:8:14.89:124,15,0	1/1:6,0:6:2.74:19,3,0	1/1:8,0:16:14.85:129,15,0	1/1:1,2:3:2.97:20,3,0	1/1:4,0:8:1.55:4,2,0	1/1:5,1:15:3.53:50,4,0	1/1:7,0:7:14.82:187,15,0	1/1:8,0:10:17.97:222,18,0	1/1:12,0:12:14.94:143,15,0	1/1:2,1:5:9.03:167,9,0
chr10	26104863	.	T	TTTTA	2854.55	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-7.805;DP=435;FS=33.584;HRun=0;HaplotypeScore=115.6736;InbreedingCoeff=0.8317;MQ=62.51;MQ0=34;MQRankSum=-4.543;QD=57.09;ReadPosRankSum=0.351;VQSLOD=2.4807;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:13:24.05:0,24,363	0/0:10,0:10:11.82:0,12,151	0/0:24,0:16:39.11:0,39,621	0/0:18,0:9:9.03:0,9,169	0/0:16,0:14:29.45:0,29,419	0/0:9,0:8:12.04:0,12,205	0/0:13,0:13:9.03:0,9,150	1/1:6,28:32:78.25:1895,78,0	0/0:13,0:13:24.08:0,24,449	0/0:17,0:15:33.10:0,33,576	0/0:12,0:10:21.02:0,21,311	0/0:9,0:9:15.05:0,15,266	0/0:14,0:14:15.03:0,15,221	0/0:13,0:12:14.89:0,15,191	0/0:15,0:13:17.98:0,18,276	0/0:12,0:11:12:0,12,152	1/1:1,15:15:42.14:1080,42,0	0/0:18,0:16:15.01:0,15,244	0/0:18,0:15:33.11:0,33,602	0/0:14,0:14:25.64:0,26,445	0/0:14,0:9:18.06:0,18,344	0/0:11,0:10:26.98:0,27,432	0/0:19,0:18:26.18:0,26,411	0/0:18,0:16:15.56:0,16,245	0/0:8,0:7:15.01:0,15,240	0/0:21,0:19:39.12:0,39,673	0/0:19,0:16:10.28:0,10,114	0/0:11,0:9:24.08:0,24,383
chr10	26104873	.	CTCT	C	6306.26	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=0.878;DP=379;FS=5.348;HRun=0;HaplotypeScore=88.8750;InbreedingCoeff=0.8160;MQ=45.84;MQ0=39;MQRankSum=0.364;QD=20.54;ReadPosRankSum=2.610;VQSLOD=4.5327;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,8:8:6.02:80,6,0	1/1:0,6:7:6:96,6,0	0/0:17,0:9:24.06:0,24,296	0/0:14,0:5:12.03:0,12,143	1/1:4,9:13:20.98:226,21,0	1/1:4,1:8:7.46:133,7,0	1/1:2,8:11:12.04:176,12,0	0/0:26,0:24:63.20:0,63,795	1/1:2,9:11:21.07:381,21,0	1/1:2,11:11:27.08:409,27,0	1/1:3,7:8:12.04:176,12,0	1/1:2,5:8:15.05:245,15,0	1/1:0,10:11:9.03:162,9,0	1/1:5,9:13:15.01:196,15,0	1/1:2,0:13:21.07:280,21,0	1/1:1,8:8:6.02:96,6,0	0/0:15,0:14:11.78:0,12,302	1/1:5,11:15:18:242,18,0	1/1:5,14:18:54.11:762,54,0	1/1:1,9:11:21.07:305,21,0	1/1:4,0:6:15.05:224,15,0	1/1:2,1:11:23.96:314,24,0	1/1:3,12:16:24.06:314,24,0	1/1:3,11:15:14.87:244,15,0	1/1:2,5:6:12.04:176,12,0	1/1:4,10:14:33.08:561,33,0	1/1:6,0:14:11.93:135,12,0	1/1:2,6:8:23.95:375,24,0
chr10	26104875	.	CT	C	1102.20	PASS	AB=0.917;AC=47;AF=0.839;AN=56;BaseQRankSum=8.505;DP=382;FS=1.405;HRun=1;HaplotypeScore=104.6416;InbreedingCoeff=0.5857;MQ=45.60;MQ0=40;MQRankSum=-3.417;QD=3.53;ReadPosRankSum=3.136;VQSLOD=0.4807;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,2:8:2.80:6,3,0	1/1:7,0:7:4.35:17,4,0	0/0:17,0:9:24.03:0,24,288	0/0:14,0:5:12.02:0,12,138	1/1:13,2:13:2.27:31,2,0	1/1:9,0:8:4.25:19,4,0	1/1:10,0:11:8.11:28,8,0	0/0:26,0:24:60.15:0,60,745	1/1:11,1:11:19.57:92,20,0	1/1:13,0:11:8.76:48,9,0	1/1:11,0:8:7.99:27,8,0	1/1:6,2:8:12.38:70,12,0	1/1:11,0:11:8.19:35,8,0	1/1:11,3:13:10.55:47,11,0	1/1:17,0:16:15.74:72,16,0	1/1:9,0:8:4.35:17,4,0	0/0:13,0:12:18.33:0,18,262	1/1:16,2:15:15.22:86,15,0	1/1:18,3:18:14.27:141,14,0	1/1:10,1:11:13.81:60,14,0	1/1:12,1:7:5.77:29,6,0	0/1:10,1:10:9.92:37,0,10	1/1:15,1:16:7.42:56,7,0	1/1:16,1:15:12.80:55,13,0	1/1:6,0:6:7.64:26,8,0	1/1:13,3:14:27.64:142,28,0	1/1:16,0:14:10.07:53,10,0	1/1:9,2:8:14.30:71,14,0
chr10	26104939	.	GTA	G	433.87	PASS	AB=0.963;AC=21;AF=0.375;AN=56;BaseQRankSum=-3.590;DP=496;FS=1.766;HRun=0;HaplotypeScore=202.7733;InbreedingCoeff=-0.4393;MQ=39.10;MQ0=22;MQRankSum=0.431;QD=1.15;ReadPosRankSum=-8.611;VQSLOD=0.1694;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:25,1:24:36.54:37,0,127	0/0:7,0:7:2.93:0,3,19	0/0:19,0:7:10.55:0,11,140	0/1:19,0:4:4.30:4,0,25	0/1:21,1:21:81.71:98,0,82	0/1:17,2:19:36.86:37,0,161	0/1:15,3:18:52.72:53,0,174	0/1:18,0:12:55.77:57,0,56	0/0:15,0:14:4.23:0,4,142	0/0:21,0:17:40.33:0,40,451	0/1:16,0:15:32.79:33,0,83	0/1:20,1:21:6.45:6,0,170	0/1:11,0:11:6.82:7,0,167	0/0:22,0:22:17.08:0,17,182	0/1:26,0:25:11.14:17,0,11	0/1:14,1:15:5.20:5,0,101	1/1:14,2:16:6.83:54,7,0	0/1:13,1:13:12.49:12,0,147	0/1:21,0:19:1.39:1,0,346	0/1:16,1:17:6.52:7,0,111	0/0:14,0:11:7.69:0,8,126	0/1:15,0:15:50.70:51,0,72	0/1:20,0:20:4.48:4,0,130	0/1:18,2:20:36.37:36,0,216	0/1:14,1:15:29.12:29,0,60	0/1:29,0:29:32.87:33,0,370	0/0:13,0:13:3.43:0,3,156	0/0:7,0:7:4.80:0,5,117
chr10	26104941	.	A	ATG	6234.57	PASS	AB=0.884;AC=44;AF=0.786;AN=56;BaseQRankSum=-2.148;DP=507;FS=10.223;HRun=0;HaplotypeScore=185.0368;InbreedingCoeff=0.1630;MQ=39.09;MQ0=22;MQRankSum=3.492;QD=13.92;ReadPosRankSum=2.014;VQSLOD=4.2209;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:19,9:26:26.62:383,27,0	1/1:6,2:8:2.77:48,3,0	0/0:22,0:8:10.18:0,10,122	0/0:22,0:4:4.52:0,5,53	1/1:14,8:21:1.82:307,2,0	1/1:11,6:18:19.02:319,19,0	1/1:15,4:19:9.32:383,9,0	0/1:16,0:10:13.07:13,0,30	1/1:8,7:14:18.06:279,18,0	0/1:18,3:17:25.24:252,0,25	1/1:9,7:15:15.04:211,15,0	1/1:10,11:21:27.47:386,27,0	0/1:10,3:13:2.18:217,0,2	1/1:16,7:23:23.74:307,24,0	0/1:24,0:23:4.03:128,0,4	1/1:10,5:15:18.06:281,18,0	0/0:15,0:15:0.84:0,1,7	1/1:9,5:13:7.56:235,8,0	0/1:17,3:19:20.38:159,0,20	1/1:12,5:16:14.64:233,15,0	1/1:11,5:13:0.16:230,0,0	1/1:6,9:15:15.24:229,15,0	1/1:19,2:21:5.38:340,5,0	0/1:15,6:21:12.75:319,0,13	1/1:9,6:15:14.86:188,15,0	1/1:19,10:29:18.36:521,18,0	1/1:7,6:13:15.05:228,15,0	1/1:6,1:7:5.39:39,5,0
chr10	26104947	.	G	GTA	2464.38	PASS	AB=1.000;AC=27;AF=0.482;AN=56;BaseQRankSum=0.501;DP=498;FS=22.311;HRun=0;HaplotypeScore=187.4870;InbreedingCoeff=-0.3498;MQ=39.69;MQ0=20;MQRankSum=9.137;QD=5.97;ReadPosRankSum=9.199;VQSLOD=0.7211;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:25:18.50:144,0,18	1/1:8,0:8:2.38:26,2,0	0/0:25,0:8:19.89:0,20,265	0/0:23,0:4:8.64:0,9,128	0/1:22,0:21:44.20:115,0,44	0/1:17,0:17:11.94:124,0,12	0/1:17,0:17:35.20:156,0,35	0/0:16,0:9:19.68:0,20,152	1/1:13,0:12:15.39:130,15,0	0/1:22,0:18:75.79:76,0,216	0/1:16,0:16:9.11:75,0,9	0/1:17,0:17:2.39:154,0,2	0/1:13,0:13:42.32:92,0,42	0/1:23,0:23:13.04:132,0,13	1/1:12,9:25:17.04:257,17,0	1/1:16,0:16:17.90:135,18,0	0/0:15,0:15:11.50:0,12,79	0/1:14,0:13:48.59:96,0,49	0/1:20,0:17:36.97:37,0,203	0/1:17,0:16:6.46:93,0,6	0/1:17,0:14:47.01:101,0,47	0/1:15,0:15:28.81:87,0,29	0/1:20,0:20:16.05:141,0,16	0/1:21,0:21:58.56:129,0,59	0/1:16,0:16:14.06:52,0,14	0/1:25,0:25:99:175,0,182	0/1:12,0:12:13.99:105,0,14	0/0:6,0:6:7.76:0,8,57
chr10	26104970	.	T	TGC	35.08	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=2.498;DP=522;FS=16.063;HRun=0;HaplotypeScore=174.8159;InbreedingCoeff=0.6290;MQ=55.55;MQ0=8;MQRankSum=-4.990;QD=0.88;ReadPosRankSum=-0.514;VQSLOD=1.9438;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:54.37:0,54,547	0/0:6,0:6:6:0,6,66	0/0:38,0:16:29.87:0,30,296	0/0:29,0:15:23.14:0,23,294	0/0:25,0:25:54.10:0,54,619	0/0:16,1:17:28.74:0,29,271	0/0:26,1:27:51.01:0,51,517	1/1:13,0:9:8.90:60,9,0	0/0:15,0:15:29.90:0,30,292	0/0:22,0:20:51.15:0,51,620	0/0:14,0:14:18.03:0,18,185	0/0:18,0:18:28.99:0,29,230	0/0:16,1:17:4.11:0,4,303	0/0:19,2:21:25.57:0,26,228	0/0:22,0:21:32.67:0,33,387	0/0:17,0:17:36.05:0,36,376	1/1:16,0:16:13.37:83,13,0	0/0:12,0:12:17.36:0,17,136	0/0:23,0:22:44.72:0,45,421	0/0:16,0:15:27.50:0,28,276	0/0:16,0:16:35.91:0,36,376	0/0:16,0:16:26.64:0,27,292	0/0:18,0:18:25.67:0,26,295	0/0:21,1:22:4.65:0,5,384	0/0:20,0:20:30.52:0,31,329	0/0:20,0:20:41.18:0,41,387	0/1:11,0:11:3.73:4,0,76	0/0:3,0:3:6.02:0,6,78
chr10	26105360	.	A	AATT	27644.27	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=3.364;DP=519;FS=10.545;HRun=0;HaplotypeScore=112.9132;InbreedingCoeff=0.9935;MQ=82.15;MQ0=0;MQRankSum=-8.559;QD=57.12;ReadPosRankSum=3.960;VQSLOD=6.7105;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,15:16:45.07:967,45,0	1/1:2,6:8:24:447,24,0	0/0:23,0:23:63.09:0,63,911	0/0:12,0:12:27.09:0,27,431	1/1:2,22:24:69.17:1452,69,0	1/1:2,19:21:54.17:1148,54,0	1/1:3,9:12:33.03:696,33,0	1/1:1,26:28:81.25:1705,81,0	1/1:1,14:15:36.12:815,36,0	1/1:7,16:23:63.16:1315,63,0	1/1:2,25:27:75.24:1654,75,0	1/1:2,15:18:51.11:1045,51,0	1/1:3,15:18:51.10:1062,51,0	1/1:1,18:19:54.10:1170,54,0	1/1:4,18:22:66.07:1328,66,0	1/1:3,14:17:48.09:994,48,0	1/1:2,15:17:48.11:1037,48,0	1/1:1,18:19:54.10:1169,54,0	1/1:4,17:22:63.18:1330,63,0	1/1:2,19:21:63.21:1363,63,0	1/1:0,9:9:27.05:563,27,0	1/1:2,9:11:21.07:475,21,0	1/1:3,19:22:45.09:886,45,0	1/1:0,9:9:24:462,24,0	1/1:4,13:17:48:942,48,0	1/1:5,26:31:87.23:1821,87,0	1/1:8,19:27:69.15:1383,69,0	1/1:7,4:11:24.04:416,24,0
chr10	26105428	.	AT	A	10818.69	PASS	AB=1.000;AC=53;AF=0.946;AN=56;BaseQRankSum=2.614;DP=442;FS=27.163;HRun=7;HaplotypeScore=92.2222;InbreedingCoeff=0.7037;MQ=78.74;MQ0=0;MQRankSum=-6.940;QD=25.34;ReadPosRankSum=3.853;VQSLOD=3.2957;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,24:24:63.14:642,63,0	1/1:0,8:8:24.05:245,24,0	0/0:15,0:14:30.09:0,30,371	0/1:10,0:10:6.02:6,0,240	1/1:2,25:27:69.15:704,69,0	1/1:2,12:14:36.08:367,36,0	1/1:0,11:11:30.07:306,30,0	1/1:1,23:24:69.14:697,69,0	1/1:0,8:8:24.05:245,24,0	1/1:3,22:25:66.14:668,66,0	1/1:5,15:20:45.09:459,45,0	1/1:1,15:16:42.09:428,42,0	1/1:0,17:17:42.10:428,42,0	1/1:4,12:16:39.09:398,39,0	1/1:2,16:18:42.09:428,42,0	1/1:0,10:10:30.07:306,30,0	1/1:0,20:20:57.13:580,57,0	1/1:1,17:18:48.11:490,48,0	1/1:4,14:18:42.09:428,42,0	1/1:3,19:22:48.10:490,48,0	1/1:0,7:7:15.03:153,15,0	1/1:2,6:8:21.05:214,21,0	1/1:2,9:11:27.06:275,27,0	1/1:1,4:5:12.03:122,12,0	1/1:0,11:11:30.07:306,30,0	1/1:7,15:22:48.09:485,48,0	1/1:3,26:29:75.17:765,75,0	1/1:2,6:8:18.04:184,18,0
chr10	26105542	.	A	AT	14765.40	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-10.845;DP=516;FS=0.463;HRun=5;HaplotypeScore=42.0714;InbreedingCoeff=0.9770;MQ=73.38;MQ0=0;MQRankSum=-2.517;QD=34.42;ReadPosRankSum=4.212;VQSLOD=4.5268;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,22:23:63.20:823,63,0	1/1:1,4:5:12.04:158,12,0	0/0:13,0:13:32.60:0,33,290	0/0:5,0:5:10.11:0,10,111	1/1:3,19:22:57.03:686,57,0	1/1:1,21:22:60.20:789,60,0	1/1:2,15:17:45.06:570,45,0	0/0:40,0:40:90.21:0,90,960	1/1:3,9:12:24.08:316,24,0	1/1:3,23:26:69.22:907,69,0	1/1:0,34:34:99:1342,102,0	1/1:2,20:22:57.19:750,57,0	1/1:5,14:19:45.14:584,45,0	1/1:0,12:12:30.10:395,30,0	0/0:14,0:14:39.10:0,39,417	1/1:0,13:13:39.13:513,39,0	0/0:15,0:15:45.11:0,45,483	1/1:0,11:11:33.11:434,33,0	1/1:5,21:27:66.21:866,66,0	1/1:4,26:30:75.24:984,75,0	1/1:1,10:11:24.08:316,24,0	1/1:1,11:12:30.10:395,30,0	1/1:0,20:20:51.17:671,51,0	1/1:0,5:5:15.05:197,15,0	1/1:0,21:21:63.20:829,63,0	1/1:1,23:24:69.22:907,69,0	1/1:3,19:22:51.16:661,51,0	1/1:2,17:19:51.17:671,51,0
chr10	26105958	.	AT	A	12637.62	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-2.545;DP=546;FS=15.234;HRun=9;HaplotypeScore=90.5675;InbreedingCoeff=0.9789;MQ=73.82;MQ0=0;MQRankSum=-5.672;QD=23.89;ReadPosRankSum=4.326;VQSLOD=4.0010;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,8:10:24.01:220,24,0	1/1:1,10:11:27.01:247,27,0	0/0:8,0:8:13.48:0,13,124	0/0:9,0:9:17.68:0,18,163	1/1:1,29:30:81.04:741,81,0	1/1:1,24:25:69.04:632,69,0	1/1:0,19:19:51.03:467,51,0	1/1:6,27:33:81.02:741,81,0	1/1:2,19:21:51.02:467,51,0	1/1:4,26:30:78.04:714,78,0	1/1:2,23:25:69.03:632,69,0	1/1:1,17:18:51.03:467,51,0	1/1:2,17:19:51.02:467,51,0	1/1:0,11:11:33.02:302,33,0	1/1:2,22:24:60.03:549,60,0	1/1:2,12:14:36.02:330,36,0	1/1:1,11:12:30.01:275,30,0	1/1:2,14:16:42.02:384,42,0	1/1:1,9:10:27.01:247,27,0	1/1:0,29:29:81.03:741,81,0	1/1:0,21:21:57.03:522,57,0	1/1:4,20:24:62.52:557,63,0	1/1:1,26:27:78.04:714,78,0	1/1:4,11:15:33.01:302,33,0	1/1:0,21:21:54.03:494,54,0	1/1:4,24:28:72.03:659,72,0	1/1:4,23:27:63.03:576,63,0	1/1:0,9:9:21.01:192,21,0
chr10	26106928	.	A	AC	11729.74	PASS	AB=0.878;AC=24;AF=0.429;AN=56;BaseQRankSum=17.978;DP=1010;FS=8.600;HRun=1;HaplotypeScore=449.4363;InbreedingCoeff=-0.7602;MQ=61.32;MQ0=0;MQRankSum=-12.527;QD=12.41;ReadPosRankSum=-4.332;VQSLOD=1.5283;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:40,1:41:99:317,0,642	0/1:20,3:23:99:247,0,469	0/0:24,0:24:70.45:0,70,861	0/0:18,0:18:48.08:0,48,586	0/1:53,12:65:99:972,0,714	0/1:35,6:41:99:480,0,769	0/1:28,7:35:99:166,0,627	0/1:58,28:86:99:1595,0,984	0/1:23,1:24:99:218,0,479	0/1:35,10:45:99:662,0,627	0/1:39,6:45:99:566,0,781	0/1:25,4:29:99:273,0,519	0/1:29,9:38:99:656,0,375	0/1:29,2:31:99:299,0,642	0/1:39,6:45:99:458,0,792	0/1:20,2:22:99:204,0,418	0/1:11,5:16:95.05:95,0,239	0/0:8,0:8:21.07:0,21,269	0/1:41,12:53:99:817,0,748	0/1:51,9:60:99:742,0,903	0/0:14,1:15:6.68:0,7,442	0/1:44,9:53:99:626,0,910	0/1:44,4:48:99:407,0,937	0/1:11,0:11:99:128,0,129	0/1:32,4:36:99:637,0,560	0/1:35,5:40:99:428,0,640	0/1:36,7:43:99:576,0,824	0/1:14,1:15:99:161,0,123
chr10	26106959	.	CAT	C	4030.04	PASS	AB=0.723;AC=22;AF=0.393;AN=56;BaseQRankSum=8.417;DP=1014;FS=17.991;HRun=0;HaplotypeScore=236.9276;InbreedingCoeff=-0.6292;MQ=66.00;MQ0=0;MQRankSum=-8.700;QD=4.57;ReadPosRankSum=4.929;VQSLOD=1.2950;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,14:39:42.02:0,42,930	0/1:8,13:21:99:182,0,353	0/0:25,0:25:69.15:0,69,1263	0/0:23,0:23:69.24:0,69,1311	0/1:36,30:66:51.61:52,0,1290	0/1:19,17:36:99:135,0,480	0/1:22,11:33:99:113,0,752	0/1:53,21:74:99:669,0,1727	0/1:13,8:21:95.61:96,0,483	0/1:34,19:53:99:509,0,1514	0/1:22,24:46:98.79:99,0,920	0/1:18,10:28:99:128,0,589	0/1:27,11:38:3.13:3,0,1142	0/1:17,9:26:31.31:31,0,654	0/1:27,14:41:11.28:11,0,1092	0/1:16,7:23:93.21:93,0,632	0/0:16,3:19:38.78:0,39,670	0/1:4,5:9:99:135,0,150	0/1:38,13:51:99:346,0,1372	0/1:42,21:63:99:129,0,1814	0/0:11,1:12:18.74:0,19,349	0/1:27,23:50:99:212,0,962	0/1:34,21:55:99:174,0,1533	0/0:13,2:15:19.31:0,19,351	0/1:29,14:43:77.56:78,0,1408	0/1:24,17:41:99:494,0,1098	0/1:26,24:50:99:245,0,1122	0/1:9,4:13:95.72:96,0,424
chr10	26106964	.	CA	C	1491.14	PASS	AB=0.843;AC=9;AF=0.161;AN=56;BaseQRankSum=14.664;DP=925;FS=5.915;HRun=2;HaplotypeScore=221.1266;InbreedingCoeff=-0.1934;MQ=69.62;MQ0=0;MQRankSum=-11.015;QD=4.81;ReadPosRankSum=3.598;VQSLOD=0.6859;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:50.99:0,51,682	0/1:16,4:20:11.58:12,0,282	0/0:24,1:25:56.21:0,56,864	0/0:25,0:25:69.10:0,69,1004	0/0:46,17:63:69.13:0,69,1040	0/1:24,6:30:0.59:1,0,401	0/0:21,5:26:17.68:0,18,594	0/1:26,30:56:99:1021,0,606	0/0:14,3:17:9.33:0,9,353	0/1:39,8:47:99:199,0,1074	0/0:35,9:44:35.50:0,36,647	0/0:19,6:25:1.84:0,2,485	0/0:27,8:35:61:0,61,918	0/0:21,3:24:35.80:0,36,599	0/0:31,8:39:58.48:0,58,932	0/0:19,2:21:18.73:0,19,533	0/1:16,2:18:38.49:38,0,413	0/1:7,1:8:39.66:40,0,115	0/1:38,4:42:89.62:90,0,1100	0/0:49,10:59:91.33:0,91,1479	0/0:8,0:8:21.07:0,21,313	0/0:33,13:46:24.51:0,25,740	0/0:47,4:51:61.15:0,61,1179	0/0:12,1:13:19:0,19,271	0/0:38,4:42:71.13:0,71,1214	0/1:34,6:40:99:192,0,896	0/1:40,9:49:32.04:32,0,942	0/0:13,1:14:12.42:0,12,372
chr10	26107545	.	AAC	A	16958.85	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-0.709;DP=532;FS=18.702;HRun=0;HaplotypeScore=69.3064;InbreedingCoeff=0.9964;MQ=90.40;MQ0=1;MQRankSum=-7.400;QD=36.95;ReadPosRankSum=6.717;VQSLOD=4.7819;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,12:12:33.11:473,33,0	1/1:0,8:8:21.07:301,21,0	0/0:27,0:27:53.33:0,53,1128	0/0:22,0:22:57.17:0,57,921	1/1:2,26:28:75.22:1051,75,0	1/1:0,14:14:39.13:559,39,0	1/1:2,12:14:24.08:344,24,0	0/0:13,0:13:30.09:0,30,515	1/1:2,19:21:54.18:773,54,0	1/1:0,20:20:60.19:842,60,0	1/1:0,18:18:45.15:645,45,0	1/1:0,14:14:33.11:473,33,0	1/1:1,20:21:60.20:860,60,0	1/1:0,18:18:48.16:688,48,0	1/1:1,25:26:54.18:774,54,0	1/1:0,26:26:72.24:1031,72,0	0/0:11,0:11:33.11:0,33,603	1/1:4,9:12:24.06:342,24,0	1/1:0,22:22:66.21:927,66,0	1/1:0,30:30:90.15:1199,90,0	1/1:2,15:17:39.13:559,39,0	1/1:0,14:14:36.07:491,36,0	1/1:0,17:17:38.85:558,39,0	1/1:0,9:9:24.08:344,24,0	1/1:1,29:30:75.25:1074,75,0	1/1:1,25:26:75.22:1031,75,0	1/1:1,30:31:87.29:1235,87,0	1/1:0,10:10:27.09:387,27,0
chr10	26108024	.	ATAT	A	13917.94	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=7.323;DP=447;FS=0.479;HRun=0;HaplotypeScore=136.1268;InbreedingCoeff=0.9265;MQ=70.55;MQ0=0;MQRankSum=-10.436;QD=37.72;ReadPosRankSum=4.014;VQSLOD=5.9062;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,4:5:9.50:148,10,0	1/1:0,6:6:18.06:289,18,0	0/0:20,0:18:51.17:0,51,1104	0/0:9,0:9:27.09:0,27,636	1/1:3,36:39:96.31:1520,96,0	1/1:1,24:25:52.12:825,52,0	1/1:0,10:10:27.09:443,27,0	0/0:23,0:22:62.15:0,62,928	1/1:1,25:26:66.23:1071,66,0	1/1:2,27:29:76.20:1204,76,0	1/1:0,16:16:39.13:633,39,0	1/1:10,0:10:2.84:14,3,0	1/1:1,13:14:42.13:646,42,0	1/1:1,19:20:53.67:875,54,0	0/0:14,0:14:42.14:0,42,640	1/1:5,12:17:42.11:633,42,0	0/0:12,0:11:33.11:0,33,523	1/1:0,5:5:12.04:198,12,0	1/1:3,11:14:27.36:409,27,0	1/1:0,15:15:36.12:579,36,0	1/1:1,13:14:33.58:537,34,0	1/1:0,3:3:9.03:149,9,0	1/1:2,8:10:24.55:394,25,0	1/1:1,13:14:30.10:484,30,0	1/1:1,16:17:36.12:581,36,0	1/1:1,20:21:60.63:899,61,0	1/1:1,23:24:63.22:1022,63,0	1/1:8,7:15:23.99:362,24,0
chr10	26108026	.	ATCT	A	13964.18	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=7.117;DP=445;FS=0.485;HRun=0;HaplotypeScore=135.5792;InbreedingCoeff=0.9248;MQ=69.56;MQ0=0;MQRankSum=-10.434;QD=38.36;ReadPosRankSum=4.502;VQSLOD=5.8797;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,0:5:9.03:147,9,0	1/1:6,0:6:18.06:294,18,0	0/0:19,0:17:42.11:0,42,802	0/0:10,0:10:27.09:0,27,586	1/1:36,0:36:93.32:1499,93,0	1/1:25,0:25:51.17:835,51,0	1/1:10,0:10:27.09:439,27,0	0/0:23,0:22:63.22:0,63,1403	1/1:26,0:26:66.23:1076,66,0	1/1:29,0:29:75.73:1228,76,0	1/1:16,0:16:39.13:633,39,0	1/1:0,10:10:3.01:50,3,0	1/1:13,0:13:39.13:626,39,0	1/1:20,0:20:54.18:881,54,0	0/0:16,0:16:48.16:0,48,1029	1/1:16,0:17:42.11:636,42,0	0/0:12,0:11:33.11:0,33,742	1/1:5,0:5:12.04:195,12,0	1/1:13,0:13:24.08:378,24,0	1/1:15,0:15:36.12:588,36,0	1/1:14,0:14:33.11:539,33,0	1/1:3,0:3:9.03:144,9,0	1/1:9,0:10:24.08:389,24,0	1/1:14,0:14:30.10:487,30,0	1/1:17,0:17:36.12:589,36,0	1/1:21,0:21:60.17:918,60,0	1/1:24,0:24:63.22:1029,63,0	1/1:10,0:15:24.04:363,24,0
chr10	26108712	.	GA	G	239.88	PASS	AB=0.889;AC=3;AF=0.054;AN=56;BaseQRankSum=3.355;DP=567;FS=6.382;HRun=10;HaplotypeScore=112.7965;InbreedingCoeff=0.5227;MQ=73.99;MQ0=2;MQRankSum=-1.433;QD=7.74;ReadPosRankSum=0.200;VQSLOD=1.9423;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:23:62.94:0,63,639	0/0:15,0:15:42.11:0,42,463	0/0:20,0:16:24.84:0,25,278	0/0:16,1:17:0.36:0,0,197	0/0:27,1:28:37.11:0,37,628	0/0:24,0:26:68.97:0,69,718	0/0:9,0:10:26.91:0,27,279	0/0:41,0:41:75.61:0,76,977	0/0:26,0:25:63.10:0,63,679	0/0:27,1:30:54.91:0,55,775	0/0:19,0:19:42.05:0,42,438	0/0:14,0:14:33.07:0,33,348	0/0:22,1:25:39.94:0,40,640	0/0:12,0:12:36.10:0,36,397	1/1:3,0:15:38.91:323,39,0	0/0:22,0:22:53.93:0,54,539	0/0:18,2:21:30.90:0,31,533	0/0:4,0:4:12.01:0,12,122	0/0:13,0:13:30.08:0,30,328	0/0:24,0:26:62.96:0,63,662	0/0:14,1:15:16.11:0,16,396	0/0:15,2:16:13.05:0,13,369	0/0:22,0:22:57.07:0,57,599	0/0:24,2:26:30.99:0,31,519	0/0:20,1:21:31.10:0,31,569	0/1:14,2:16:21.96:22,0,227	0/0:26,0:26:63.14:0,63,674	0/0:17,0:17:45.07:0,45,473
chr10	26108725	.	C	CA	709.66	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=-0.040;DP=555;FS=7.088;HRun=0;HaplotypeScore=120.9259;InbreedingCoeff=0.0765;MQ=71.60;MQ0=2;MQRankSum=0.087;QD=4.25;ReadPosRankSum=-4.366;VQSLOD=2.0316;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:19,0:19:4.19:4,0,160	0/0:14,0:14:38.94:0,39,190	0/0:21,0:17:21.80:0,22,516	0/0:13,0:13:33.01:0,33,402	0/0:27,0:27:50.48:0,50,255	0/1:26,0:26:15.57:16,0,185	0/1:12,0:12:44.89:45,0,69	0/0:40,0:40:99:0,120,1598	0/0:24,0:23:56.98:0,57,271	0/1:29,0:29:25.93:26,0,163	0/0:19,0:19:33.86:0,34,179	0/0:12,0:12:3.88:0,4,101	0/1:26,0:26:2.34:2,0,188	0/0:13,0:13:34.13:0,34,152	1/1:6,13:19:54.15:708,54,0	0/0:23,0:23:40.50:0,40,176	0/0:20,0:20:56.71:0,57,713	0/0:5,0:5:11.44:0,11,81	0/0:14,0:14:26.48:0,26,131	0/0:27,0:27:20.76:0,21,214	0/0:15,0:15:30.48:0,30,145	0/1:18,0:17:37.85:38,0,103	0/0:21,0:21:24.84:0,25,191	0/0:19,0:19:6.26:0,6,128	0/0:23,0:23:22.29:0,22,202	0/0:15,0:15:4.17:0,4,55	0/0:23,0:23:49.62:0,50,277	0/1:18,0:18:4.89:5,0,165
chr10	26109099	.	TAAA	T	24778.45	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=13.088;DP=605;FS=5.025;HRun=3;HaplotypeScore=166.2616;InbreedingCoeff=0.9415;MQ=79.66;MQ0=0;MQRankSum=-8.349;QD=49.07;ReadPosRankSum=7.341;VQSLOD=4.1392;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:0,10:10:21.07:391,21,0	1/1:0,15:15:42.14:777,42,0	0/0:25,0:25:75.24:0,75,1655	0/0:12,0:12:6.37:0,6,743	1/1:0,34:34:84.24:1512,84,0	1/1:1,19:20:51.17:948,51,0	1/1:0,15:15:42.14:782,42,0	0/0:46,0:46:99:0,138,3279	1/1:0,30:30:75.26:1392,75,0	1/1:0,25:25:75.24:1357,75,0	1/1:0,21:21:60.16:1069,60,0	1/1:0,29:29:78.27:1454,78,0	1/1:0,16:16:42.14:770,42,0	1/1:0,24:24:63.22:1174,63,0	1/1:0,22:22:60.21:1116,60,0	1/1:0,21:21:54.19:1001,54,0	0/0:17,0:17:48.16:0,48,1110	1/1:0,2:2:5.98:76,6,0	1/1:0,24:24:72.21:1291,72,0	1/1:0,35:35:99:1725,99,0	1/1:0,21:21:54.19:1003,54,0	1/1:0,21:21:60.21:1117,60,0	1/1:0,28:28:62.79:1165,63,0	1/1:0,12:12:23.60:411,24,0	1/1:0,20:20:57.20:1055,57,0	1/1:0,26:26:75.24:1364,75,0	1/1:0,24:24:69.24:1269,69,0	1/1:0,10:10:30.10:559,30,0
chr10	26109461	.	C	CT	12542.55	PASS	AB=0.568;AC=49;AF=0.875;AN=56;BaseQRankSum=-8.259;DP=618;FS=3.532;HRun=10;HaplotypeScore=67.2369;InbreedingCoeff=0.7980;MQ=83.55;MQ0=0;MQRankSum=-4.629;QD=22.28;ReadPosRankSum=2.271;VQSLOD=5.9540;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,25:29:60.62:641,61,0	1/1:1,9:10:24.06:256,24,0	0/0:17,0:17:25.09:0,25,236	0/0:20,0:21:29.81:0,30,225	1/1:3,33:38:52.49:890,52,0	1/1:4,20:25:62.99:654,63,0	1/1:2,11:13:5.43:263,5,0	1/1:10,21:32:63.90:650,64,0	1/1:7,14:21:39.10:416,39,0	1/1:9,28:37:62.54:854,63,0	1/1:2,15:17:19.89:365,20,0	1/1:2,20:22:51.13:544,51,0	1/1:6,19:25:32.46:539,32,0	1/1:4,12:16:27.07:288,27,0	0/0:17,0:17:38.95:0,39,320	1/1:1,22:24:59.98:623,60,0	1/1:4,24:28:38.53:615,39,0	1/1:1,8:9:24.06:256,24,0	1/1:3,15:19:47.95:494,48,0	1/1:6,31:38:41.31:811,41,0	1/1:7,14:21:11.45:327,11,0	1/1:4,24:28:69.13:723,69,0	1/1:6,17:23:20.43:410,20,0	1/1:3,7:10:24.06:256,24,0	1/1:3,21:24:57.14:608,57,0	1/1:2,16:18:20.46:417,20,0	0/1:6,19:25:10.11:483,0,10	1/1:2,9:11:15.04:160,15,0
chr10	26109881	.	C	CTT	18991.85	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=4.312;DP=604;FS=7.901;HRun=8;HaplotypeScore=126.6637;InbreedingCoeff=0.9362;MQ=72.68;MQ0=0;MQRankSum=-3.774;QD=37.31;ReadPosRankSum=2.794;VQSLOD=3.6665;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,25:29:62.69:940,63,0	1/1:0,9:9:27.09:429,27,0	0/0:10,0:10:1.61:0,2,148	0/0:11,0:11:10.57:0,11,173	1/1:6,24:30:72.20:1104,72,0	1/1:2,34:37:87.30:1381,87,0	1/1:4,13:18:35.56:486,36,0	0/0:27,0:27:63.13:0,63,702	1/1:1,25:28:71.69:1076,72,0	1/1:6,27:35:82.97:1229,83,0	1/1:4,20:25:57.15:868,57,0	1/1:2,12:14:32.75:517,33,0	1/1:3,21:24:54.18:857,54,0	1/1:1,16:17:48.16:762,48,0	0/0:30,0:30:81.20:0,81,903	1/1:1,10:13:29.59:437,30,0	0/0:17,0:17:51.14:0,51,568	1/1:0,8:8:24.08:380,24,0	1/1:4,14:19:51.14:753,51,0	1/1:4,35:39:99:1544,99,0	1/1:1,19:22:50.66:770,51,0	1/1:3,19:22:63.16:941,63,0	1/1:5,23:31:72.74:1022,73,0	1/1:1,18:19:57.15:877,57,0	1/1:1,16:18:42.14:666,42,0	1/1:2,16:19:48.16:762,48,0	1/1:2,21:24:54.18:857,54,0	1/1:0,8:8:21.07:333,21,0
chr10	26110763	.	TC	T	13702.75	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=12.426;DP=498;FS=16.529;HRun=2;HaplotypeScore=85.8108;InbreedingCoeff=0.9935;MQ=83.37;MQ0=0;MQRankSum=-4.189;QD=34.43;ReadPosRankSum=6.518;VQSLOD=3.0528;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,18:18:48.11:604,48,0	1/1:0,14:14:33.11:422,33,0	0/0:18,0:18:46.58:0,47,603	0/0:11,0:11:33.09:0,33,465	1/1:0,33:33:93.20:1163,93,0	1/1:0,22:22:57.19:739,57,0	1/1:0,9:9:24.08:312,24,0	0/0:30,0:30:90.28:0,90,1294	1/1:0,19:19:54.18:701,54,0	1/1:0,22:22:66.20:842,66,0	1/1:0,15:15:45.15:584,45,0	1/1:0,19:19:54.18:701,54,0	1/1:0,14:14:39.13:506,39,0	1/1:0,18:18:48.16:623,48,0	0/0:23,0:23:69.23:0,69,1027	1/1:1,13:14:27.09:350,27,0	0/0:18,0:18:54.17:0,54,785	1/1:0,7:7:18.02:215,18,0	1/1:0,13:13:39.13:504,39,0	1/1:0,23:23:69.13:852,69,0	1/1:0,20:20:54.18:701,54,0	1/1:0,20:20:54.11:674,54,0	1/1:0,19:19:48.11:604,48,0	1/1:0,7:7:15.05:195,15,0	1/1:0,12:12:33.11:428,33,0	1/1:0,19:19:57.19:740,57,0	1/1:0,18:18:48.16:623,48,0	1/1:0,23:23:48.15:621,48,0
chr10	26111600	.	A	AAC	16035.94	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=9.647;DP=789;FS=4.247;HRun=0;HaplotypeScore=399.0860;InbreedingCoeff=0.9927;MQ=42.92;MQ0=2;MQRankSum=-8.906;QD=22.40;ReadPosRankSum=5.238;VQSLOD=4.3921;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:20,1:21:29.81:471,30,0	1/1:18,0:18:51.34:415,51,0	0/0:29,0:22:60.19:0,60,829	0/0:14,0:13:39.09:0,39,540	1/1:46,0:46:94.69:778,95,0	1/1:32,0:33:97.59:992,98,0	1/1:29,0:30:45.68:622,46,0	1/1:26,0:25:45.36:324,45,0	1/1:28,1:29:68.96:631,69,0	1/1:37,0:37:94.82:922,95,0	1/1:32,1:33:85.69:825,86,0	1/1:34,0:35:92.84:831,93,0	1/1:20,0:20:48.69:400,49,0	1/1:35,0:35:97.52:878,98,0	0/0:30,0:30:90.28:0,90,1309	1/1:39,0:40:99:936,105,0	1/1:23,0:23:22.43:382,22,0	1/1:13,0:13:21.57:163,22,0	1/1:25,0:22:57.48:441,57,0	1/1:44,0:44:99:1041,115,0	1/1:9,0:9:15.88:159,16,0	1/1:26,0:27:65.14:630,65,0	1/1:37,0:38:94.02:962,94,0	1/1:26,2:28:44.11:484,44,0	1/1:27,0:28:67.86:697,68,0	1/1:26,1:28:73.39:664,73,0	1/1:33,2:34:99:928,100,0	1/1:14,0:14:41.86:460,42,0
chr10	26111603	.	AC	A	14036.13	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=8.233;DP=558;FS=4.494;HRun=3;HaplotypeScore=87.4066;InbreedingCoeff=0.9884;MQ=48.61;MQ0=1;MQRankSum=-9.119;QD=29.24;ReadPosRankSum=5.640;VQSLOD=4.1422;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,12:17:42.10:497,42,0	1/1:2,10:12:30.09:370,30,0	0/0:33,0:26:68.94:0,69,867	0/0:15,0:13:36.06:0,36,450	1/1:1,22:23:35.91:386,36,0	1/1:3,20:23:65.78:773,66,0	1/1:4,19:23:63.12:747,63,0	1/1:1,15:16:30.07:357,30,0	1/1:1,17:18:48.15:587,48,0	1/1:5,22:27:66.19:796,66,0	1/1:2,22:24:65.95:769,66,0	1/1:1,21:22:56.91:678,57,0	1/1:0,12:12:27.08:333,27,0	1/1:2,17:19:50.93:627,51,0	0/0:30,0:30:87.29:0,87,1251	1/1:2,25:27:75.24:925,75,0	1/1:2,15:17:14.61:367,15,0	1/1:3,9:12:24.07:294,24,0	1/1:2,14:14:42.13:519,42,0	1/1:1,25:26:69.09:814,69,0	1/1:0,10:10:18.06:219,18,0	1/1:3,14:17:32.61:458,33,0	1/1:4,26:30:69.19:845,69,0	1/1:3,14:17:33.06:390,33,0	1/1:1,21:22:53.96:641,54,0	1/1:2,11:13:23.70:361,24,0	1/1:3,21:24:67.07:801,67,0	1/1:0,13:13:39.12:481,39,0
chr10	26111806	.	GA	G	680.48	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.487;DP=616;FS=0.000;HRun=5;HaplotypeScore=69.4839;InbreedingCoeff=0.9996;MQ=59.56;MQ0=2;MQRankSum=-3.775;QD=18.39;ReadPosRankSum=-1.531;VQSLOD=2.9075;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:75.23:0,75,1008	0/0:14,0:14:39.13:0,39,532	0/0:22,1:19:54.09:0,54,674	0/0:16,0:13:38.86:0,39,473	0/0:30,0:30:81.21:0,81,1067	0/0:25,0:25:72.23:0,72,973	0/0:16,0:16:48.16:0,48,657	1/1:3,20:16:42.04:432,42,0	0/0:21,0:21:60.16:0,60,798	0/0:33,0:33:90.28:0,90,1203	0/0:25,0:25:75.25:0,75,1026	0/0:23,0:23:63.20:0,63,842	0/0:21,0:21:57.19:0,57,779	0/0:22,0:22:63.20:0,63,846	0/0:24,0:24:72.21:0,72,953	0/0:25,0:25:72.16:0,72,938	1/1:2,12:14:33.09:370,33,0	0/0:15,0:15:39.13:0,39,533	0/0:24,0:24:66.20:0,66,872	0/0:30,0:30:81.27:0,81,1107	0/0:26,0:26:69.23:0,69,943	0/0:24,0:24:72.20:0,72,962	0/0:25,0:25:72.13:0,72,909	0/0:15,0:15:42.10:0,42,553	0/0:17,0:17:51.16:0,51,684	0/0:18,0:18:48.16:0,48,656	0/0:29,0:29:81.24:0,81,1073	0/0:11,0:11:33.11:0,33,451
chr10	26113406	.	AG	A	15930.03	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=14.538;DP=608;FS=1.570;HRun=2;HaplotypeScore=112.7238;InbreedingCoeff=0.9974;MQ=61.20;MQ0=0;MQRankSum=-0.281;QD=34.86;ReadPosRankSum=4.781;VQSLOD=4.5835;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,47:47:99:1437,111,0	1/1:1,9:10:23.77:307,24,0	0/0:22,0:16:41.25:0,41,617	0/0:28,0:28:68.13:0,68,1090	1/1:0,14:14:42.14:539,42,0	1/1:0,17:17:45.15:584,45,0	1/1:0,24:24:60.20:779,60,0	0/0:34,0:34:99:0,102,1466	1/1:0,17:17:48.16:623,48,0	1/1:0,14:14:42.12:517,42,0	1/1:0,14:14:42.13:531,42,0	1/1:0,13:13:39.13:506,39,0	1/1:0,11:11:30.10:389,30,0	1/1:0,19:19:54.18:701,54,0	0/0:32,0:32:96.30:0,96,1397	1/1:0,23:23:60.20:779,60,0	0/0:35,0:35:99:0,102,1490	1/1:0,20:20:57.19:739,57,0	1/1:0,17:17:39.13:501,39,0	1/1:0,22:22:63.20:813,63,0	1/1:0,42:42:99:1402,108,0	1/1:0,18:18:54.18:699,54,0	1/1:0,13:13:36.12:467,36,0	1/1:0,31:31:84.27:1090,84,0	1/1:0,23:23:66.21:852,66,0	1/1:0,18:18:54.13:665,54,0	1/1:0,20:20:60.19:777,60,0	1/1:0,10:10:18.06:233,18,0
chr10	26116703	.	GT	G	1245.27	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.756;DP=553;FS=0.700;HRun=1;HaplotypeScore=51.4905;InbreedingCoeff=0.9839;MQ=60.70;MQ0=3;MQRankSum=0.558;QD=31.13;ReadPosRankSum=-0.877;VQSLOD=3.0357;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:24:70.80:0,71,1038	0/0:21,0:21:63.12:0,63,952	0/0:15,0:13:39.11:0,39,574	0/0:18,0:12:12.53:0,13,503	0/0:31,0:31:84.08:0,84,1238	0/0:23,0:23:69.24:0,69,1102	0/0:15,0:15:45.14:0,45,696	1/1:1,20:20:57.18:781,57,0	0/0:15,0:15:45.15:0,45,713	0/0:26,0:25:75.25:0,75,1177	0/0:36,0:36:99:0,108,1691	0/0:13,0:13:39.10:0,39,570	0/0:19,0:19:57.19:0,57,909	0/0:19,0:19:57.18:0,57,887	0/0:11,0:11:33.11:0,33,527	0/0:16,0:16:48.16:0,48,767	1/1:0,19:19:42.14:586,42,0	0/0:12,0:12:36.09:0,36,547	0/0:22,0:21:63.21:0,63,985	0/0:26,0:26:78.24:0,78,1200	0/0:11,0:10:27.09:0,27,431	0/0:19,0:19:57.08:0,57,832	0/0:11,0:11:33.11:0,33,527	0/0:15,0:15:39.12:0,39,589	0/0:25,0:25:75.23:0,75,1152	0/0:33,0:33:99:0,99,1513	0/0:27,0:27:81.26:0,81,1270	0/0:10,0:8:24.08:0,24,383
chr10	26118452	.	GTTGT	G	1426.03	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.895;DP=548;FS=0.734;HRun=0;HaplotypeScore=82.9788;InbreedingCoeff=0.9929;MQ=58.39;MQ0=2;MQRankSum=-6.349;QD=43.21;ReadPosRankSum=-0.511;VQSLOD=3.8542;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:60.21:0,60,1621	0/0:9,0:9:24.08:0,24,655	0/0:14,0:7:18.06:0,18,453	0/0:19,0:11:30.09:0,30,764	0/0:38,0:38:99:0,114,3116	0/0:24,0:24:72.25:0,72,1972	0/0:12,0:12:36.12:0,36,961	1/1:2,11:13:30.10:581,30,0	0/0:15,0:15:45.15:0,45,1234	0/0:34,0:34:99:0,99,2598	0/0:26,0:26:75.26:0,75,2054	0/0:18,0:18:54.17:0,54,1422	0/0:22,0:22:66.23:0,66,1808	0/0:15,0:15:45.15:0,45,1233	0/0:17,0:17:45.15:0,45,1233	0/0:16,0:16:48.15:0,48,1257	1/1:0,20:20:51.17:966,51,0	0/0:20,0:19:51.18:0,51,1374	0/0:20,0:20:60.21:0,60,1644	0/0:29,0:29:87.30:0,87,2311	0/0:15,0:15:45.15:0,45,1224	0/0:25,0:25:72.23:0,72,1915	0/0:24,0:24:72.16:0,72,1808	0/0:12,0:12:30.10:0,30,822	0/0:18,0:18:54.19:0,54,1444	0/0:18,0:18:54.18:0,54,1424	0/0:25,0:25:72.25:0,72,1972	0/0:8,0:8:24.08:0,24,657
chr10	26118823	.	T	TA	1999.25	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-7.383;DP=683;FS=1.153;HRun=1;HaplotypeScore=67.3620;InbreedingCoeff=0.9982;MQ=58.81;MQ0=2;MQRankSum=1.447;QD=35.07;ReadPosRankSum=-3.395;VQSLOD=2.5200;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:84.25:0,84,1072	0/0:8,0:8:24.08:0,24,311	0/0:24,0:15:39.13:0,39,505	0/0:22,0:19:49.97:0,50,617	0/0:25,0:25:69.22:0,69,896	0/0:30,0:30:87.28:0,87,1129	0/0:9,0:9:27.09:0,27,351	1/1:2,28:30:84.27:1238,84,0	0/0:30,0:30:90.29:0,90,1169	0/0:38,0:38:99:0,108,1375	0/0:19,0:19:51.17:0,51,660	0/0:16,0:16:48.14:0,48,607	0/0:30,0:30:87.27:0,87,1115	0/0:28,0:28:81.26:0,81,1052	0/0:32,0:32:96.31:0,96,1247	0/0:23,0:23:63.20:0,63,818	1/1:4,23:27:32.16:883,32,0	0/0:18,0:18:51.12:0,51,643	0/0:24,0:24:72.23:0,72,935	0/0:34,0:33:99:0,99,1285	0/0:18,0:18:54.15:0,54,685	0/0:24,0:24:69.22:0,69,896	0/0:34,0:34:96.28:0,96,1216	0/0:14,0:14:36.12:0,36,467	0/0:23,0:23:63.20:0,63,818	0/0:27,0:27:81.26:0,81,1052	0/0:28,0:28:84.26:0,84,1076	0/0:18,0:18:51.12:0,51,641
chr10	26119224	.	C	CTT	6511.69	PASS	AB=0.860;AC=47;AF=0.839;AN=56;BaseQRankSum=-8.121;DP=516;FS=0.536;HRun=12;HaplotypeScore=83.9737;InbreedingCoeff=0.5364;MQ=63.01;MQ0=5;MQRankSum=2.429;QD=14.57;ReadPosRankSum=0.076;VQSLOD=3.6780;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,5:15:28.38:351,28,0	1/1:2,5:8:11.93:123,12,0	0/1:20,0:13:7.55:8,0,52	0/1:17,0:7:7.95:8,0,14	1/1:3,20:24:39.02:487,39,0	1/1:2,16:19:30.10:421,30,0	1/1:3,6:9:9.03:126,9,0	0/0:9,0:32:64.40:0,64,272	1/1:4,12:17:26.57:332,27,0	1/1:10,13:24:38.36:459,38,0	1/1:3,26:30:29.26:641,29,0	1/1:4,15:20:9.02:105,9,0	1/1:1,6:7:3.01:42,3,0	1/1:6,9:17:14.48:147,14,0	0/0:19,0:19:41.66:0,42,372	1/1:6,6:14:12.04:168,12,0	0/0:3,0:17:25.66:0,26,118	1/1:8,2:10:14.06:160,14,0	1/1:4,8:11:2.28:306,2,0	1/1:5,15:22:13.22:523,13,0	0/1:3,8:11:18.74:75,0,19	1/1:7,11:21:25.90:263,26,0	1/1:4,14:22:12.16:334,12,0	1/1:2,12:14:21.07:294,21,0	1/1:9,11:23:25.78:294,26,0	1/1:4,3:26:59.92:533,60,0	1/1:11,2:29:17.35:154,17,0	1/1:3,2:12:15.03:157,15,0
chr10	26120083	.	G	GT	8130.62	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-7.390;DP=364;FS=29.401;HRun=8;HaplotypeScore=42.2133;InbreedingCoeff=0.9471;MQ=78.82;MQ0=0;MQRankSum=-4.995;QD=25.98;ReadPosRankSum=3.349;VQSLOD=3.1371;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,10:13:34.85:355,35,0	1/1:2,4:6:9.03:104,9,0	0/0:18,0:16:19.12:0,19,264	0/0:17,0:16:18.18:0,18,309	1/1:3,13:16:39.11:447,39,0	1/1:0,8:8:24.07:277,24,0	1/1:3,19:22:48.14:554,48,0	1/1:6,20:26:48.09:522,48,0	1/1:2,9:11:15.04:173,15,0	1/1:3,10:13:30.07:334,30,0	1/1:4,7:11:21.06:239,21,0	1/1:3,5:8:15.04:169,15,0	1/1:2,12:14:39.11:446,39,0	1/1:2,9:11:21.06:242,21,0	0/0:16,0:16:36.01:0,36,329	1/1:1,10:11:27.08:312,27,0	1/1:1,13:14:33.10:381,33,0	1/1:3,10:13:21.06:242,21,0	1/1:1,11:12:33.10:381,33,0	1/1:1,8:9:24.07:277,24,0	1/1:3,6:9:18.05:208,18,0	1/1:0,6:6:15.04:173,15,0	1/1:1,13:14:36.06:399,36,0	1/1:1,8:9:21.06:242,21,0	1/1:0,9:9:24.07:277,24,0	1/1:0,12:12:36.09:405,36,0	1/1:3,19:22:51.15:589,51,0	1/1:3,11:14:33.10:381,33,0
chr10	26120263	.	T	TA	1380.38	PASS	AC=16;AF=0.571;AN=28;BaseQRankSum=-3.992;DP=97;FS=23.879;HRun=1;HaplotypeScore=25.2355;InbreedingCoeff=0.5730;MQ=77.53;MQ0=2;MQRankSum=-1.641;QD=22.26;ReadPosRankSum=0.142;VQSLOD=1.9232;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:4:3.35:0,3,34	./.	0/0:6,0:3:9.01:0,9,100	0/0:8,0:7:11.97:0,12,103	1/1:3,0:3:5.99:49,6,0	./.	./.	1/1:5,26:27:64.41:855,64,0	./.	1/1:4,0:4:3.47:29,3,0	1/1:3,0:3:3:25,3,0	1/1:2,0:2:2.60:10,3,0	./.	./.	0/0:5,0:5:14.62:0,15,154	./.	1/1:1,15:16:34.93:476,35,0	1/1:1,1:2:4.81:30,5,0	0/0:1,0:1:2.37:0,2,8	1/1:1,0:1:3:25,3,0	./.	./.	./.	./.	./.	./.	./.	0/0:2,0:2:1.82:0,2,5
chr10	26122954	.	T	TTTTG	586.94	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=-1.383;DP=585;FS=1.109;HRun=0;HaplotypeScore=94.8714;InbreedingCoeff=0.6192;MQ=71.49;MQ0=2;MQRankSum=-0.526;QD=11.98;ReadPosRankSum=0.821;VQSLOD=3.1710;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:84.27:0,84,1362	0/0:7,0:7:15.05:0,15,250	0/1:31,0:21:29.34:29,0,147	0/0:24,0:20:12.03:0,12,168	0/0:22,0:22:48.16:0,48,799	0/0:21,0:21:36.12:0,36,588	0/0:23,0:23:63.21:0,63,1031	0/0:36,0:36:66.22:0,66,1013	0/0:28,0:28:54.17:0,54,858	0/0:25,0:25:57.19:0,57,913	0/0:25,0:25:63.17:0,63,996	0/0:10,0:10:24.08:0,24,384	0/0:17,0:17:51.17:0,51,835	0/0:20,0:20:51.17:0,51,840	1/1:6,11:18:27.09:663,27,0	0/0:18,0:18:42.13:0,42,673	0/0:17,0:17:33.11:0,33,541	0/0:21,0:21:32.59:0,33,662	0/0:24,0:24:57.19:0,57,914	0/0:24,0:24:63.21:0,63,990	0/0:7,0:7:18.06:0,18,300	0/0:22,0:22:42.14:0,42,688	0/0:20,0:20:45.15:0,45,740	0/0:10,0:10:27.05:0,27,410	0/0:28,0:28:60.20:0,60,936	0/0:28,0:28:75.25:0,75,1208	0/0:17,0:17:39.13:0,39,631	0/0:12,0:12:21.04:0,21,297
chr10	26123533	.	AG	A	176.07	PASS	AB=0.750;AC=17;AF=0.850;AN=20;BaseQRankSum=1.532;DP=38;FS=0.000;HRun=7;HaplotypeScore=16.7536;InbreedingCoeff=0.0109;MQ=24.45;MQ0=9;MQRankSum=-1.296;QD=9.27;ReadPosRankSum=2.003;VQSLOD=-0.5242;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,1:2:3.01:31,3,0	./.	./.	./.	1/1:0,3:1:3.01:31,3,0	1/1:1,1:1:2.97:20,3,0	./.	0/0:3,0:1:3.01:0,3,38	./.	0/1:2,1:2:5.46:24,0,5	./.	1/1:0,1:1:3.01:31,3,0	./.	./.	./.	./.	./.	./.	./.	1/1:0,1:1:3.01:31,3,0	./.	./.	./.	./.	1/1:0,1:1:3.01:31,3,0	1/1:1,1:2:3.01:31,3,0	1/1:1,3:1:3.01:31,3,0	./.
chr10	26124688	.	CTTCAT	C	1362.45	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=7.552;DP=736;FS=1.473;HRun=0;HaplotypeScore=154.0501;InbreedingCoeff=0.9602;MQ=71.74;MQ0=1;MQRankSum=2.936;QD=17.25;ReadPosRankSum=1.820;VQSLOD=3.4453;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:47.99:0,48,913	0/0:5,0:5:12:0,12,274	0/0:28,0:27:21.06:0,21,421	0/0:38,0:32:28.76:0,29,628	0/0:41,0:41:66.48:0,66,1343	0/0:34,0:34:74.91:0,75,1350	0/0:20,0:20:39.05:0,39,896	1/1:14,0:28:21.53:246,22,0	0/0:20,0:20:51.01:0,51,1016	0/0:34,0:34:81.28:0,81,1873	0/0:30,0:30:63.04:0,63,1310	0/0:28,0:28:62.96:0,63,1035	0/0:31,0:31:69.06:0,69,1333	0/0:28,0:28:63.04:0,63,1209	1/1:10,22:32:60.21:1116,60,0	0/0:26,0:26:66.04:0,66,1369	1/1:15,0:19:12.04:139,12,0	0/0:8,0:8:17.91:0,18,213	0/0:20,0:20:27.09:0,27,586	0/0:38,0:38:87.13:0,87,1789	0/0:11,0:11:15.01:0,15,308	0/0:37,0:37:87.08:0,87,1870	0/0:31,0:31:65.71:0,66,1326	0/0:12,0:12:15.01:0,15,271	0/0:32,0:33:87.26:0,87,2161	0/0:27,0:28:66.23:0,66,1556	0/0:37,0:37:90.01:0,90,1763	0/0:11,0:11:27.04:0,27,506
chr10	26125257	.	T	TCTCCATCTGAAA	905.14	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=4.651;DP=538;FS=0.000;HRun=0;HaplotypeScore=182.7090;InbreedingCoeff=0.9656;MQ=86.17;MQ0=0;MQRankSum=-1.524;QD=90.51;ReadPosRankSum=-0.063;VQSLOD=3.1166;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,117,4449	0/0:10,0:10:27.08:0,27,976	0/0:23,0:23:66.20:0,66,2213	0/0:31,0:31:77.33:0,77,2669	0/0:26,0:26:78.27:0,78,2987	0/0:20,0:20:60.19:0,60,2134	0/0:15,0:15:45.11:0,45,1384	1/1:0,1:4:12.03:303,12,0	0/0:15,0:15:45.15:0,45,1696	0/0:27,0:27:81.28:0,81,3077	0/0:18,0:18:51.12:0,51,1735	0/0:17,0:17:48.16:0,48,1830	0/0:24,0:24:72.20:0,72,2452	0/0:21,0:21:60.21:0,60,2374	0/0:19,0:19:57.18:0,57,2082	0/0:16,0:16:48.16:0,48,1797	1/1:2,4:6:12.04:712,12,0	0/0:8,0:8:24.08:0,24,951	0/0:19,0:19:54.17:0,54,1798	0/0:23,0:23:66.21:0,66,2421	0/0:25,0:25:75.24:0,75,2647	0/0:23,0:23:69.22:0,69,2444	0/0:13,0:13:36.11:0,36,1332	0/0:21,0:21:63.20:0,63,2364	0/0:11,0:11:33.08:0,33,1209	0/0:24,0:24:72.24:0,72,2711	0/0:21,0:20:63.22:0,63,2424	0/0:16,0:16:48.12:0,48,1592
chr10	26125259	.	G	GT	53.85	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=4.193;DP=536;FS=0.000;HRun=0;HaplotypeScore=60.1939;InbreedingCoeff=0.8764;MQ=86.31;MQ0=0;MQRankSum=-2.791;QD=4.90;ReadPosRankSum=0.240;VQSLOD=3.0675;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,123,1673	0/0:9,0:9:24.08:0,24,336	0/0:24,0:24:69.19:0,69,905	0/0:30,0:30:67.98:0,68,955	0/0:27,0:27:81.23:0,81,1095	0/0:21,0:21:57.19:0,57,796	0/0:16,0:16:45.13:0,45,610	1/1:4,1:5:2.74:32,3,0	0/0:15,0:15:45.15:0,45,629	0/0:29,0:29:81.27:0,81,1131	0/0:18,0:18:54.16:0,54,734	0/0:17,0:17:51.16:0,51,695	0/0:22,0:22:66.22:0,66,920	0/0:20,0:20:60.20:0,60,839	0/0:18,0:18:54.18:0,54,755	0/0:16,0:16:48.16:0,48,671	1/1:2,4:6:11.92:124,12,0	0/0:8,0:8:24.08:0,24,336	0/0:19,0:19:57.17:0,57,766	0/0:22,0:22:66.21:0,66,904	0/0:25,0:25:69.21:0,69,946	0/0:21,0:21:63.21:0,63,881	0/0:13,0:13:39.11:0,39,526	0/0:21,0:21:60.20:0,60,839	0/0:10,0:10:30.10:0,30,419	0/0:24,0:24:69.23:0,69,964	0/0:22,0:21:63.19:0,63,854	0/0:16,0:16:48.16:0,48,668
chr10	26126442	.	AT	A	16610.99	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=11.684;DP=566;FS=5.437;HRun=1;HaplotypeScore=96.9085;InbreedingCoeff=0.9988;MQ=86.40;MQ0=0;MQRankSum=-5.881;QD=36.67;ReadPosRankSum=6.024;VQSLOD=4.7515;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,23:23:69.22:895,69,0	1/1:0,7:7:21.07:273,21,0	0/0:22,0:22:60.15:0,60,907	0/0:15,0:15:36.62:0,37,559	1/1:0,25:25:66.21:856,66,0	1/1:0,19:19:51.17:662,51,0	1/1:1,24:25:66.21:857,66,0	0/0:30,0:30:90.31:0,90,1439	1/1:0,20:20:60.20:779,60,0	1/1:0,21:21:60.19:777,60,0	1/1:0,25:25:69.22:894,69,0	1/1:0,14:14:42.14:542,42,0	1/1:0,17:17:51.17:662,51,0	1/1:1,14:15:39.13:506,39,0	0/0:24,0:24:72.25:0,72,1150	1/1:0,16:16:48.16:623,48,0	0/0:22,0:22:66.20:0,66,1030	1/1:0,10:10:30.10:389,30,0	1/1:0,16:16:48.16:623,48,0	1/1:2,22:24:63.20:812,63,0	1/1:0,14:14:42.14:545,42,0	1/1:0,18:18:48.16:623,48,0	1/1:0,27:27:75.24:973,75,0	1/1:0,18:18:54.18:701,54,0	1/1:0,22:22:63.20:818,63,0	1/1:1,22:23:66.21:855,66,0	1/1:0,41:41:99:1554,120,0	1/1:0,13:13:30.10:389,30,0
chr10	26127209	.	AACAC	A	6546.50	PASS	AB=0.843;AC=43;AF=0.827;AN=52;BaseQRankSum=0.049;DP=523;FS=0.695;HRun=0;HaplotypeScore=95.9390;InbreedingCoeff=0.4967;MQ=62.48;MQ0=10;MQRankSum=2.437;QD=16.08;ReadPosRankSum=3.123;VQSLOD=4.5750;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:27,5:31:23.10:435,23,0	1/1:4,11:14:9.10:421,9,0	./.	./.	1/1:12,9:23:32.52:432,33,0	1/1:14,11:25:21.83:530,22,0	1/1:13,7:20:21.06:307,21,0	0/0:22,0:22:15.02:0,15,277	1/1:10,2:15:1.11:242,1,0	1/1:10,12:22:30.08:422,30,0	1/1:14,6:20:29.91:344,30,0	1/1:11,0:15:8.56:106,9,0	1/1:5,8:13:19.90:328,20,0	1/1:4,5:10:27.08:401,27,0	0/0:8,0:24:21.07:0,21,366	1/1:11,2:14:21.06:275,21,0	0/0:18,0:19:31.07:0,31,496	1/1:13,0:15:6.68:80,7,0	0/1:12,0:12:9.98:105,0,10	1/1:21,2:24:33.07:428,33,0	0/1:11,7:18:1.03:221,0,1	1/1:4,4:8:14.41:197,14,0	1/1:5,3:8:5.86:94,6,0	0/1:15,4:21:16.26:204,0,16	1/1:14,3:17:12.03:169,12,0	1/1:15,5:21:21.04:261,21,0	1/1:16,7:23:27.09:412,27,0	1/1:13,3:16:2.15:133,2,0
chr10	26127302	.	A	AG	17078.82	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=6.234;DP=458;FS=28.060;HRun=0;HaplotypeScore=110.6788;InbreedingCoeff=0.9868;MQ=80.16;MQ0=0;MQRankSum=-7.589;QD=40.86;ReadPosRankSum=3.893;VQSLOD=2.8070;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,13:13:39.13:575,39,0	1/1:0,5:5:15.05:225,15,0	0/0:14,0:14:42.12:0,42,547	0/0:14,0:14:27.10:0,27,426	1/1:0,22:22:48.07:685,48,0	1/1:0,28:28:78.26:1150,78,0	1/1:0,17:17:48.16:710,48,0	1/1:0,31:31:93.30:1364,93,0	1/1:0,11:11:27.09:404,27,0	1/1:1,9:10:27.09:395,27,0	1/1:1,21:22:60.20:887,60,0	1/1:0,13:13:36.12:535,36,0	1/1:0,15:15:45.15:677,45,0	1/1:0,9:9:21.07:311,21,0	0/0:12,0:12:33.10:0,33,441	1/1:0,14:14:39.13:585,39,0	1/1:0,27:27:75.15:1091,75,0	1/1:0,7:7:21.07:314,21,0	1/1:0,15:15:45.14:652,45,0	1/1:0,21:21:60.20:873,60,0	1/1:0,7:7:18.06:269,18,0	1/1:0,13:13:36.12:533,36,0	1/1:0,22:22:63.21:922,63,0	1/1:0,16:16:42.61:608,43,0	1/1:0,11:11:30.10:440,30,0	1/1:0,29:29:87.29:1302,87,0	1/1:1,29:30:78.26:1168,78,0	1/1:0,10:10:27.09:405,27,0
chr10	26128875	.	GT	G	954.76	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-9.127;DP=611;FS=5.601;HRun=10;HaplotypeScore=115.7721;InbreedingCoeff=0.9833;MQ=74.15;MQ0=1;MQRankSum=-1.878;QD=17.68;ReadPosRankSum=-2.891;VQSLOD=2.3789;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:19:40.20:0,40,212	0/0:0,0:5:14.31:0,14,72	0/0:10,0:10:24.01:0,24,245	0/0:13,0:13:27.03:0,27,271	0/0:2,0:29:63.74:0,64,342	0/0:2,0:22:51.82:0,52,276	0/0:2,0:12:31.68:0,32,164	1/1:4,29:33:86.97:752,87,0	0/0:6,0:24:49.05:0,49,266	0/0:7,0:30:60.56:0,61,329	0/0:4,0:28:67.03:0,67,345	0/0:5,0:21:40.17:0,40,207	0/0:5,0:24:51.43:0,51,263	0/0:4,0:21:40.17:0,40,207	0/0:24,1:25:37.11:0,37,631	0/0:2,0:15:28.72:0,29,145	1/1:6,13:21:40.06:325,40,0	0/0:4,0:15:31.67:0,32,166	0/0:5,0:27:69.68:0,70,381	0/0:4,0:36:78.13:0,78,431	0/0:2,0:18:37.27:0,37,188	0/0:2,0:24:49.24:0,49,255	0/0:4,0:26:47.08:0,47,234	0/0:3,0:15:25.67:0,26,129	0/0:3,0:22:46.03:0,46,243	0/0:2,0:30:68.28:0,68,355	0/0:4,0:36:66.45:0,66,343	0/0:2,0:9:18.16:0,18,88
chr10	26129615	.	TA	T	975.24	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-6.311;DP=582;FS=14.236;HRun=6;HaplotypeScore=124.7873;InbreedingCoeff=0.8884;MQ=82.81;MQ0=0;MQRankSum=-3.160;QD=26.36;ReadPosRankSum=-1.819;VQSLOD=1.6577;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:66.21:0,66,868	0/0:12,0:12:27.07:0,27,341	0/0:23,0:23:59.94:0,60,726	0/0:15,0:15:36.11:0,36,443	0/0:39,0:39:99:0,114,1484	0/0:17,0:17:45.14:0,45,579	0/0:10,0:10:27.09:0,27,355	1/1:0,22:22:66.11:677,66,0	0/0:22,0:22:63.19:0,63,814	0/0:28,0:28:84.27:0,84,1094	0/0:24,0:24:69.22:0,69,901	0/0:12,0:12:36.12:0,36,473	0/0:20,0:20:57.19:0,57,749	0/0:20,0:20:51.17:0,51,671	0/0:25,0:25:75.23:0,75,972	0/0:16,0:16:45.13:0,45,573	1/1:0,15:15:39.10:419,39,0	0/0:11,1:12:0.84:0,1,342	0/0:18,0:18:51.14:0,51,653	0/0:31,0:31:75.23:0,75,964	0/0:10,0:10:30.10:0,30,394	0/0:26,0:26:72.18:0,72,913	0/0:23,0:23:57.15:0,57,708	0/0:18,0:18:54.12:0,54,675	0/0:25,0:25:69.22:0,69,908	0/0:20,0:20:51.16:0,51,657	0/0:42,0:42:99:0,117,1520	0/0:13,0:13:39.13:0,39,513
chr10	26130945	.	A	AT	16971.62	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-10.872;DP=656;FS=0.388;HRun=5;HaplotypeScore=62.1023;InbreedingCoeff=0.9975;MQ=62.25;MQ0=0;MQRankSum=1.672;QD=32.33;ReadPosRankSum=4.615;VQSLOD=5.1635;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,33:35:87.25:1125,87,0	1/1:1,12:13:30.10:394,30,0	0/0:20,0:15:36.02:0,36,351	0/0:32,0:26:52.96:0,53,561	1/1:2,27:29:78.17:987,78,0	1/1:3,26:29:66.21:868,66,0	1/1:3,18:21:45.15:592,45,0	0/0:23,0:23:63.07:0,63,633	1/1:3,21:24:60.20:789,60,0	1/1:1,22:23:63.18:810,63,0	1/1:1,16:17:39.13:512,39,0	1/1:2,17:19:39.13:509,39,0	1/1:0,15:15:36.12:474,36,0	1/1:0,23:23:66.21:866,66,0	0/0:18,0:18:51.13:0,51,548	1/1:0,21:21:54.18:711,54,0	0/0:38,0:38:99:0,111,1155	1/1:2,21:23:47.74:601,48,0	1/1:2,15:16:41.80:504,42,0	1/1:3,22:25:60.14:768,60,0	1/1:2,26:28:72.23:945,72,0	1/1:1,21:22:25.11:678,25,0	1/1:2,22:24:66.21:862,66,0	1/1:1,26:26:66.21:868,66,0	1/1:2,22:24:44.42:762,44,0	1/1:3,33:35:96.30:1241,96,0	1/1:0,24:24:66.21:868,66,0	1/1:0,6:6:18.06:237,18,0
chr10	26131718	.	C	CT	168.53	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=2.327;DP=255;FS=0.000;HRun=14;HaplotypeScore=235.2523;InbreedingCoeff=0.3088;MQ=57.05;MQ0=10;MQRankSum=0.791;QD=1.40;ReadPosRankSum=2.221;VQSLOD=-0.0668;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:8,0:8:0.01:0,0,15	0/1:4,0:4:1.79:2,0,2	1/1:6,0:3:2.37:8,2,0	0/0:14,0:12:8.48:0,8,48	0/0:13,0:13:11.56:0,12,48	0/0:7,0:7:3.83:0,4,13	0/0:6,0:6:7.89:0,8,29	0/1:8,0:5:0:1,0,0	0/0:8,0:7:0.14:0,0,5	0/0:8,0:7:1.07:0,1,2	0/0:10,0:10:5.25:0,5,18	0/0:9,0:8:9.30:0,9,37	1/1:7,0:7:1.21:12,1,0	0/0:4,0:4:2.82:0,3,9	1/1:4,13:17:26.95:230,27,0	0/0:12,0:11:8.33:0,8,38	1/1:10,0:9:0.76:7,1,0	0/0:4,0:4:1.46:0,1,10	1/1:9,0:6:3.22:13,3,0	0/1:13,0:11:1.12:1,0,21	0/0:9,0:9:8.13:0,8,24	0/0:12,0:12:9.04:0,9,31	0/0:12,0:12:12.90:0,13,47	0/1:10,0:10:3.04:3,0,16	0/1:12,0:11:2.48:2,0,9	0/0:7,0:7:4.31:0,4,19	1/1:8,0:8:0.22:1,0,0	0/1:7,0:7:4.41:12,0,4
chr10	26133859	.	C	CAG	18934.49	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-5.003;DP=539;FS=4.517;HRun=0;HaplotypeScore=66.9904;InbreedingCoeff=0.9840;MQ=80.08;MQ0=1;MQRankSum=-2.505;QD=43.83;ReadPosRankSum=5.911;VQSLOD=6.5766;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,18:19:39.13:702,39,0	1/1:0,8:8:15.05:250,15,0	0/0:13,0:13:14.54:0,15,401	0/0:13,0:13:30.09:0,30,403	1/1:0,32:32:84.29:1513,84,0	1/1:2,25:27:72.25:1296,72,0	1/1:2,11:13:27.09:486,27,0	0/0:43,0:43:99:0,117,1622	1/1:0,13:13:39.13:702,39,0	1/1:2,27:29:81.28:1439,81,0	1/1:3,31:34:81.28:1439,81,0	1/1:0,14:14:39.13:702,39,0	1/1:0,11:11:27.09:486,27,0	1/1:0,7:7:21.07:378,21,0	0/0:19,0:19:51.17:0,51,714	1/1:2,13:15:33.11:594,33,0	0/0:18,0:18:54.17:0,54,730	1/1:0,8:8:21.07:378,21,0	1/1:2,25:27:75.20:1201,75,0	1/1:1,25:26:72.25:1276,72,0	1/1:0,15:15:33.11:594,33,0	1/1:1,20:21:54.19:973,54,0	1/1:1,15:16:39.03:702,39,0	1/1:1,6:7:15.05:270,15,0	1/1:3,16:19:39.13:702,39,0	1/1:1,23:24:69.21:1179,69,0	1/1:2,31:34:75.26:1348,75,0	1/1:2,9:13:18.06:324,18,0
chr10	26135062	.	C	CTG	1542.79	PASS	AB=0.881;AC=18;AF=0.321;AN=56;BaseQRankSum=13.164;DP=698;FS=5.136;HRun=0;HaplotypeScore=307.3189;InbreedingCoeff=-0.2469;MQ=59.66;MQ0=1;MQRankSum=-12.745;QD=4.38;ReadPosRankSum=-4.908;VQSLOD=1.4408;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:22,2:23:32.74:33,0,153	0/1:12,3:15:75.59:76,0,214	0/0:39,0:33:76.96:0,77,1093	0/0:40,0:32:82.79:0,83,1042	0/0:24,1:25:8.92:0,9,239	0/1:34,8:42:90.93:91,0,356	0/1:11,0:11:37.88:38,0,59	0/0:34,0:34:96.32:0,96,1449	0/1:15,5:19:58.17:58,0,122	0/1:25,1:26:99:130,0,628	0/0:26,2:28:16.06:0,16,225	1/1:17,5:22:19.54:212,20,0	0/1:18,6:24:99:208,0,248	0/1:14,5:18:75.14:94,0,75	0/0:21,0:21:63.15:0,63,878	0/1:15,6:21:99:100,0,195	0/0:23,0:23:66.10:0,66,895	0/1:10,1:10:32.22:32,0,200	0/1:27,0:27:99:133,0,557	0/0:33,1:34:30.63:0,31,375	1/1:3,2:5:2.50:9,2,0	0/0:17,2:19:5.50:0,6,124	0/0:29,6:34:1.64:0,2,174	0/0:18,2:19:0.56:0,1,49	0/0:26,2:28:25.76:0,26,407	0/1:25,4:29:99:330,0,645	0/1:34,6:39:99:148,0,563	0/1:14,1:15:12.29:12,0,446
chr10	26135070	.	G	GTC	3694.76	PASS	AB=0.983;AC=37;AF=0.661;AN=56;BaseQRankSum=7.690;DP=749;FS=14.615;HRun=0;HaplotypeScore=309.7093;InbreedingCoeff=0.4566;MQ=53.88;MQ0=1;MQRankSum=-3.532;QD=6.45;ReadPosRankSum=2.080;VQSLOD=2.0094;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:22,2:23:12.43:106,12,0	1/1:17,0:17:11.78:165,12,0	0/0:35,0:29:37.75:0,38,430	0/0:46,0:35:27.39:0,27,504	1/1:25,0:25:0.33:1,0,0	1/1:48,0:48:25.39:170,25,0	0/1:11,0:11:0:0,0,0	0/0:37,0:37:75.19:0,75,893	1/1:21,2:22:19.21:152,19,0	0/1:24,0:24:98.42:204,0,98	1/1:33,0:33:8.98:108,9,0	0/1:27,0:27:2.48:16,0,2	0/1:27,1:28:8:108,0,8	1/1:22,0:21:12.97:75,13,0	0/0:22,0:22:54.15:0,54,659	1/1:20,0:20:17.36:152,17,0	0/0:26,0:26:50.22:0,50,606	0/0:9,0:9:9.68:0,10,62	0/1:31,2:31:99:250,0,249	1/1:31,2:33:19.98:218,20,0	1/1:8,0:8:2.04:8,2,0	1/1:23,0:23:15.79:195,16,0	1/1:36,0:35:26.25:247,26,0	1/1:23,1:23:10.08:83,10,0	1/1:29,0:29:34.53:384,35,0	0/1:33,1:34:63.66:369,0,64	0/1:38,0:37:17.16:406,0,17	1/1:12,1:13:22.28:276,22,0
chr10	26135090	.	G	GTC	2635.03	PASS	AB=0.792;AC=28;AF=0.500;AN=56;BaseQRankSum=8.183;DP=735;FS=2.737;HRun=0;HaplotypeScore=305.5526;InbreedingCoeff=0.0009;MQ=50.98;MQ0=3;MQRankSum=-10.319;QD=5.06;ReadPosRankSum=2.232;VQSLOD=2.7397;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:20,7:26:8.33:23,0,8	0/1:15,3:18:63.02:105,0,63	0/0:26,0:19:30.26:0,30,520	0/0:37,0:26:31.53:0,32,625	1/1:16,9:25:3.24:17,3,0	0/1:28,19:47:1.01:52,0,1	0/0:13,3:16:0.86:0,1,2	0/0:33,0:32:80.13:0,80,1094	1/1:17,7:24:2.76:99,3,0	0/1:17,7:24:93.46:335,0,93	0/0:24,11:35:5.62:0,6,35	1/1:15,14:29:27.72:230,28,0	0/1:16,13:29:37.33:317,0,37	1/1:15,9:24:11.15:76,11,0	0/0:22,0:22:57.19:0,57,780	0/1:14,7:21:4.11:67,0,4	0/0:18,0:18:51.15:0,51,674	0/1:11,1:11:69.91:70,0,70	0/1:29,4:31:99:260,0,193	0/1:30,6:36:56.72:57,0,72	1/1:8,5:13:2.04:8,2,0	1/1:16,8:24:6.72:33,7,0	0/1:24,12:35:10.55:26,0,11	1/1:17,9:26:3.78:12,4,0	0/0:18,9:27:0.22:0,0,37	0/1:27,12:39:73.54:648,0,74	0/1:20,11:31:31.99:313,0,32	1/1:2,1:3:3.01:52,3,0
chr10	26135096	.	GTCTC	G	3847.80	PASS	AB=0.779;AC=19;AF=0.339;AN=56;BaseQRankSum=-3.276;DP=736;FS=20.061;HRun=0;HaplotypeScore=303.4702;InbreedingCoeff=-0.4801;MQ=54.29;MQ0=3;MQRankSum=-1.904;QD=7.57;ReadPosRankSum=5.782;VQSLOD=1.1055;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:22,4:25:68.90:131,0,69	0/1:15,2:17:18.10:171,0,18	0/0:27,0:20:51.16:0,51,1037	0/0:37,0:26:40.41:0,40,1056	0/1:19,9:28:17.78:40,0,18	0/1:35,11:46:56.65:57,0,133	0/1:8,8:16:8.81:41,0,9	0/0:38,0:37:87.28:0,87,1834	0/1:16,8:24:98.56:99,0,99	0/1:14,12:26:87.36:573,0,87	0/0:25,8:33:18.80:0,19,55	0/1:23,7:30:56.01:262,0,56	0/1:21,7:29:47.29:250,0,47	0/0:15,10:25:22.51:0,23,105	0/0:20,0:20:57.20:0,57,1438	0/1:14,6:20:49.57:53,0,50	0/0:19,0:19:54.16:0,54,1251	0/1:9,3:11:99:138,0,177	0/1:21,10:29:99:381,0,236	0/1:27,7:34:11.59:310,0,12	0/1:6,9:15:3.74:4,0,15	0/1:15,8:23:33.42:33,0,45	0/1:32,4:35:70.39:102,0,70	0/0:14,12:26:13.55:0,14,59	0/1:23,4:27:33:136,0,33	0/1:19,17:36:69.79:923,0,70	0/1:23,9:32:99:144,0,112	0/0:1,2:3:1.82:0,2,5
chr10	26135100	.	C	CTG	4749.17	PASS	AB=0.785;AC=33;AF=0.589;AN=56;BaseQRankSum=7.888;DP=725;FS=0.000;HRun=0;HaplotypeScore=285.9150;InbreedingCoeff=0.1777;MQ=55.33;MQ0=3;MQRankSum=-7.412;QD=8.56;ReadPosRankSum=0.289;VQSLOD=3.8217;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:16,11:26:4.13:133,0,4	0/1:11,3:15:12.87:211,0,13	0/0:28,0:22:51.14:0,51,735	0/0:33,0:22:55.60:0,56,737	1/1:20,8:28:3.31:21,3,0	1/1:27,19:46:19.82:83,20,0	1/1:14,3:17:2.90:50,3,0	0/0:37,0:36:99:0,99,1365	0/1:17,7:24:1.25:109,0,1	0/1:18,7:25:13.89:636,0,14	0/0:20,11:31:4.97:0,5,30	1/1:16,14:30:27.97:261,28,0	0/1:18,12:30:6.29:393,0,6	1/1:16,9:25:11.15:80,11,0	0/0:21,0:21:60.19:0,60,892	1/1:12,7:19:12.88:89,13,0	0/0:20,0:20:60.14:0,60,831	0/1:11,1:11:43.06:146,0,43	0/1:23,4:25:99:475,0,135	0/1:26,8:34:32.56:204,0,33	1/1:10,5:15:8.46:64,8,0	1/1:15,8:23:6.75:38,7,0	0/1:24,12:35:1.85:60,0,2	1/1:16,9:25:3.78:12,4,0	0/1:16,10:26:7.19:135,0,7	1/1:22,12:34:14.76:1134,15,0	0/1:21,11:32:3.06:356,0,3	1/1:4,1:5:3.01:56,3,0
chr10	26136155	.	TCA	T	1963.07	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=10.071;DP=567;FS=0.000;HRun=0;HaplotypeScore=66.6144;InbreedingCoeff=0.9927;MQ=67.24;MQ0=0;MQRankSum=-0.029;QD=29.74;ReadPosRankSum=-2.072;VQSLOD=3.9928;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:81.23:0,81,1279	0/0:10,0:10:27.09:0,27,444	0/0:24,0:19:36.09:0,36,550	0/0:13,0:11:18.01:0,18,271	0/0:22,0:21:57.18:0,57,928	0/0:18,0:18:51.17:0,51,843	0/0:12,0:12:33.09:0,33,510	1/1:5,28:33:84.26:1053,84,0	0/0:12,0:12:27.09:0,27,452	0/0:26,0:26:78.25:0,78,1269	0/0:20,0:20:57.19:0,57,944	0/0:18,0:18:48.16:0,48,803	0/0:20,0:20:54.14:0,54,867	0/0:11,0:11:30.10:0,30,489	0/0:19,0:20:43.09:0,43,883	0/0:22,0:22:60.20:0,60,978	1/1:1,32:33:81.26:1031,81,0	0/0:10,0:10:27.06:0,27,393	0/0:22,0:22:63.21:0,63,1023	0/0:24,0:24:57.19:0,57,946	0/0:14,0:14:27.09:0,27,445	0/0:25,0:25:57.19:0,57,951	0/0:18,0:18:45.15:0,45,753	0/0:22,0:22:63.15:0,63,981	0/0:18,0:18:48.15:0,48,774	0/0:21,0:21:57.19:0,57,927	0/0:38,1:39:73.17:0,73,1735	0/0:9,0:9:27.09:0,27,447
chr10	26136443	.	AACAC	A	971.71	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=1.773;DP=527;FS=4.217;HRun=0;HaplotypeScore=118.0929;InbreedingCoeff=0.4153;MQ=54.06;MQ0=11;MQRankSum=0.570;QD=18.33;ReadPosRankSum=-0.467;VQSLOD=3.3536;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:11.91:0,12,194	0/0:2,0:6:2.99:0,3,23	0/0:24,0:15:2.63:0,3,179	0/0:19,0:13:15.01:0,15,219	0/0:20,0:19:2.55:0,3,47	0/0:27,0:27:9.01:0,9,123	0/0:18,0:16:3:0,3,25	1/1:18,13:31:42:577,42,0	0/0:15,0:15:12.01:0,12,180	0/0:12,0:9:22.32:0,22,435	0/0:22,0:21:6.02:0,6,94	0/0:13,0:12:8.55:0,9,153	0/0:18,0:17:9.03:0,9,175	0/0:17,0:28:3.01:0,3,52	0/0:14,0:14:29.84:0,30,664	0/0:16,0:22:5.68:0,6,100	1/1:8,13:22:33.04:512,33,0	0/0:12,0:12:17.97:0,18,252	0/0:20,0:16:23.97:0,24,338	0/0:16,0:25:7.36:0,7,67	0/0:16,0:16:5.82:0,6,110	0/0:19,0:20:4.41:0,4,46	0/0:22,0:21:14.01:0,14,209	0/0:16,0:16:8.93:0,9,136	0/0:17,0:14:6:0,6,56	0/0:16,0:13:24.06:0,24,425	0/0:11,0:18:12.03:0,12,216	0/0:2,0:2:3.01:0,3,65
chr10	26136549	.	T	TTATC	11949.31	PASS	AB=0.683;AC=45;AF=0.865;AN=52;BaseQRankSum=-5.797;DP=584;FS=0.000;HRun=0;HaplotypeScore=98.5563;InbreedingCoeff=0.1064;MQ=63.97;MQ0=7;MQRankSum=-3.084;QD=22.80;ReadPosRankSum=-0.251;VQSLOD=4.0610;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,11:23:11.83:221,12,0	1/1:7,2:9:3.01:70,3,0	./.	./.	1/1:19,17:37:42.14:927,42,0	1/1:13,16:29:39.13:913,39,0	1/1:7,3:10:6.02:140,6,0	1/1:40,0:40:5.98:60,6,0	1/1:11,6:17:15.05:347,15,0	1/1:11,13:24:41.98:857,42,0	1/1:14,11:25:21.07:473,21,0	1/1:4,9:13:12.04:281,12,0	1/1:12,12:24:24.08:559,24,0	1/1:8,1:11:3.01:68,3,0	0/0:6,0:22:33.04:0,33,307	1/1:7,13:21:27.09:632,27,0	0/1:14,4:19:19.12:491,0,19	1/1:4,4:9:12.04:281,12,0	1/1:11,2:13:3.01:70,3,0	1/1:9,18:27:51.17:1114,51,0	1/1:11,15:26:21.07:492,21,0	1/1:9,12:20:24.08:562,24,0	0/1:11,11:22:19.13:534,0,19	1/1:6,7:15:15.05:328,15,0	0/1:14,12:27:10.09:736,0,10	1/1:12,6:18:18.06:395,18,0	0/1:13,11:24:1.41:797,0,1	0/1:6,11:16:16.11:602,0,16
chr10	26138017	.	GGTGTGT	G	7444.46	PASS	AB=0.798;AC=46;AF=0.852;AN=54;BaseQRankSum=5.318;DP=550;FS=8.067;HRun=0;HaplotypeScore=156.2030;InbreedingCoeff=0.2865;MQ=63.61;MQ0=10;MQRankSum=-3.482;QD=15.13;ReadPosRankSum=1.624;VQSLOD=3.9480;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:20,12:32:3.91:296,0,4	1/1:4,2:6:6.02:122,6,0	./.	0/0:20,0:13:3.01:0,3,34	1/1:14,11:25:23.55:306,24,0	1/1:11,9:20:25.94:509,26,0	1/1:10,4:14:26.94:352,27,0	0/1:19,0:18:3.20:3,0,47	1/1:14,9:24:17.65:297,18,0	1/1:13,8:21:5.28:275,5,0	1/1:12,11:21:21.02:368,21,0	1/1:9,15:24:23.30:760,23,0	1/1:14,9:23:15.05:291,15,0	1/1:11,11:21:24.08:463,24,0	0/0:10,0:17:8.14:0,8,99	1/1:3,9:12:14.91:279,15,0	0/1:11,0:22:6.90:189,0,7	1/1:9,1:10:11.95:126,12,0	1/1:12,4:15:2.06:158,2,0	1/1:9,15:26:54.11:991,54,0	1/1:12,9:19:3.01:36,3,0	1/1:14,3:17:22.25:238,22,0	1/1:12,3:16:12.04:216,12,0	0/1:12,4:15:13.85:113,0,14	1/1:14,5:18:6.02:122,6,0	1/1:16,4:22:24.02:387,24,0	1/1:12,14:26:23.74:463,24,0	1/1:8,3:12:6.46:83,6,0
chr10	26138567	.	A	AT	4788.45	PASS	AB=0.661;AC=38;AF=0.679;AN=56;BaseQRankSum=8.967;DP=347;FS=8.443;HRun=0;HaplotypeScore=80.9638;InbreedingCoeff=-0.0548;MQ=71.14;MQ0=0;MQRankSum=-1.233;QD=15.06;ReadPosRankSum=7.648;VQSLOD=6.0897;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:9,5:14:80.21:100,0,80	1/1:0,1:1:3:27,3,0	0/0:14,0:12:21.28:0,21,296	0/0:6,0:5:5.16:0,5,77	0/1:8,17:25:3.21:360,0,3	1/1:5,9:14:11.75:242,12,0	1/1:3,6:9:0.90:151,1,0	0/1:24,12:36:70.34:319,0,70	0/1:4,5:9:16.88:133,0,17	0/1:7,8:15:6.51:231,0,7	1/1:7,11:18:2.85:290,3,0	1/1:1,1:2:6:52,6,0	1/1:2,2:4:8.98:75,9,0	0/1:2,3:5:9.73:50,0,10	0/0:9,0:9:27.08:0,27,362	0/1:6,6:12:34.86:159,0,35	1/1:7,14:21:22.12:381,22,0	0/1:5,5:10:30.24:127,0,30	1/1:5,11:16:16.14:335,16,0	0/1:11,12:23:8.76:290,0,9	1/1:1,2:3:5.80:40,6,0	1/1:3,3:6:7.63:101,8,0	1/1:0,5:5:14.81:116,15,0	0/1:4,5:9:19.12:87,0,19	1/1:4,16:20:40.03:430,40,0	0/1:7,8:15:13.55:234,0,14	0/1:5,5:11:4.43:138,0,4	1/1:2,13:15:18.26:319,18,0
chr10	26138568	.	A	AAT	7016.26	PASS	AB=0.651;AC=36;AF=0.643;AN=56;BaseQRankSum=8.660;DP=346;FS=5.686;HRun=0;HaplotypeScore=78.9454;InbreedingCoeff=-0.1800;MQ=71.08;MQ0=0;MQRankSum=-0.299;QD=22.20;ReadPosRankSum=8.184;VQSLOD=4.4908;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:9,5:14:99:179,0,114	1/1:0,1:1:3.01:37,3,0	0/0:14,0:12:27.62:0,28,296	0/0:6,0:5:11.58:0,12,91	0/1:8,17:25:35.61:523,0,36	0/1:5,9:14:16.28:325,0,16	0/1:3,6:9:10.53:221,0,11	0/1:23,12:35:99:561,0,146	0/1:4,5:9:36.28:161,0,36	0/1:7,8:15:22:342,0,22	0/1:7,11:18:45.69:380,0,46	1/1:0,1:1:3.01:37,3,0	1/1:1,2:3:9.02:98,9,0	0/1:2,3:5:20.60:80,0,21	0/0:10,0:10:27.08:0,27,388	0/1:6,6:12:45.90:240,0,46	1/1:6,14:20:31.85:533,32,0	0/1:5,5:10:16.43:233,0,16	1/1:5,11:16:0.59:471,1,0	0/1:11,12:23:44.87:475,0,45	1/1:1,2:3:6:60,6,0	1/1:3,3:6:15.02:162,15,0	1/1:0,5:5:15.03:166,15,0	0/1:5,5:10:35.34:127,0,35	1/1:3,16:19:33.33:572,33,0	1/1:8,8:16:13.33:417,13,0	0/1:4,5:10:27.87:178,0,28	1/1:4,13:17:7.53:438,8,0
chr10	26139014	.	CGTGCGTGAGTGCGTGCGTGTGT	C	5102.49	PASS	AB=0.535;AC=29;AF=0.630;AN=46;BaseQRankSum=-1.481;DP=701;FS=21.406;HRun=0;HaplotypeScore=256.6607;InbreedingCoeff=0.6043;MQ=51.14;MQ0=9;MQRankSum=1.553;QD=13.08;ReadPosRankSum=6.315;VQSLOD=2.2040;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	1/1:6,13:19:14.94:466,15,0	0/0:40,0:22:15.05:0,15,482	0/0:36,0:25:28.74:0,29,784	0/0:4,15:19:1.41:0,1,3	0/0:3,15:19:2.76:0,3,7	./.	1/1:10,17:25:47.66:588,48,0	0/0:6,21:25:1.41:0,1,3	1/1:12,21:32:35.97:899,36,0	./.	1/1:11,25:35:3.01:144,3,0	0/1:3,20:23:0:0,0,0	1/1:6,27:32:5.30:88,5,0	1/1:25,0:24:15.05:313,15,0	0/0:7,6:13:0.34:0,0,0	1/1:28,1:25:23.94:429,24,0	1/1:21,2:19:26.40:623,26,0	1/1:11,5:15:9.26:85,9,0	0/0:2,12:14:0.96:0,1,2	1/1:58,0:47:35.39:423,35,0	./.	./.	1/1:13,24:36:2.50:13,2,0	0/0:7,21:28:0.94:0,1,2	1/1:5,15:19:26.33:730,26,0	1/1:4,4:8:2.68:11,3,0	1/1:1,2:3:9.03:291,9,0
chr10	26139024	.	TGC	T	42.74	PASS	AB=0.991;AC=9;AF=0.167;AN=54;BaseQRankSum=4.843;DP=629;FS=1.042;HRun=0;HaplotypeScore=139.2637;InbreedingCoeff=0.0377;MQ=50.56;MQ0=13;MQRankSum=-4.649;QD=0.24;ReadPosRankSum=1.492;VQSLOD=2.5056;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:39,1:40:0:0,0,0	0/0:16,0:16:20.94:0,21,263	0/0:38,0:19:38.41:0,38,521	0/0:30,1:18:38.73:0,39,603	0/0:17,0:17:5.87:0,6,82	0/0:17,1:18:4.23:0,4,42	1/1:18,2:19:3:37,3,0	0/0:21,0:20:18.91:0,19,501	0/0:26,0:24:9.03:0,9,156	0/1:30,0:29:10.26:10,0,518	0/0:16,0:16:2.99:0,3,24	0/0:29,0:28:8.91:0,9,133	0/1:21,0:21:0:0,0,0	0/0:31,1:31:6.02:0,6,111	0/0:19,1:19:30.10:0,30,534	0/0:11,0:11:11.96:0,12,148	0/1:23,1:20:40.13:40,0,533	0/1:20,0:16:13.38:13,0,518	0/0:12,0:11:20.99:0,21,280	0/0:13,1:14:2.99:0,3,41	0/0:49,9:45:21.02:0,21,760	./.	0/0:11,0:11:3.01:0,3,57	0/0:33,1:33:0.98:0,1,91	0/0:28,0:28:9.03:0,9,155	0/1:19,0:18:6.58:7,0,359	0/0:5,1:6:2.97:0,3,20	0/1:4,0:4:49.94:50,0,68
chr10	26139028	.	T	TGC	1219.78	PASS	AB=1.000;AC=29;AF=0.558;AN=52;BaseQRankSum=0.504;DP=595;FS=19.102;HRun=0;HaplotypeScore=131.6096;InbreedingCoeff=0.3455;MQ=48.76;MQ0=13;MQRankSum=3.096;QD=3.34;ReadPosRankSum=0.003;VQSLOD=1.3893;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:37:0:0,0,0	1/1:15,0:15:3.96:48,4,0	0/0:30,0:10:18.06:0,18,243	0/0:32,0:16:29.02:0,29,414	0/1:16,0:16:0.07:0,0,0	1/1:16,0:16:2.68:11,3,0	0/0:20,0:19:0.47:0,0,1	1/1:18,0:17:0.48:142,0,0	0/1:26,0:24:0:0,0,0	0/1:25,0:24:1.60:94,0,2	./.	0/0:28,0:27:2.22:0,2,7	1/1:20,0:20:1.25:3,1,0	1/1:31,0:30:6.77:67,7,0	1/1:15,6:20:14.83:218,15,0	0/1:9,0:9:0.02:0,0,0	0/1:25,0:21:6.95:91,0,7	0/1:22,0:18:4.42:208,0,4	1/1:8,0:7:5.38:29,5,0	0/1:13,0:13:0.10:0,0,0	1/1:61,0:48:35.34:303,35,0	./.	0/1:11,0:11:0:0,0,0	0/0:31,0:30:2.60:0,3,10	0/0:25,0:25:2.93:0,3,22	1/1:18,0:17:20.46:119,20,0	1/1:5,0:5:2.61:11,3,0	0/1:5,0:5:1.46:1,0,17
chr10	26139030	.	C	CGCGTGTGT	4482.67	PASS	AB=0.984;AC=39;AF=0.780;AN=50;BaseQRankSum=2.790;DP=580;FS=16.850;HRun=0;HaplotypeScore=140.0590;InbreedingCoeff=0.5264;MQ=48.56;MQ0=13;MQRankSum=0.896;QD=9.87;ReadPosRankSum=0.024;VQSLOD=2.7995;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:37,0:37:0:0,0,0	1/1:13,0:14:14.76:351,15,0	0/0:28,0:8:18.03:0,18,398	0/0:31,0:16:28.69:0,29,696	0/1:15,0:15:0:1,0,0	1/1:16,0:16:1.82:6,2,0	1/1:4,14:21:3.01:35,3,0	1/1:18,0:17:47.66:588,48,0	0/1:21,1:21:0:1,0,0	1/1:24,0:23:30.01:630,30,0	./.	1/1:26,0:26:2.99:87,3,0	1/1:20,0:20:1.25:3,1,0	1/1:29,1:30:5.17:88,5,0	1/1:20,0:21:14.71:312,15,0	0/1:7,0:7:0:1,0,0	1/1:23,1:20:33.36:393,33,0	1/1:20,3:19:18.92:676,19,0	1/1:5,0:5:5.89:70,6,0	0/1:13,0:13:0.51:1,0,2	1/1:57,5:49:41.38:496,41,0	./.	./.	0/0:29,1:29:2.34:0,2,12	1/1:23,0:24:3:26,3,0	1/1:16,0:16:26.30:418,26,0	1/1:5,0:5:3.92:14,4,0	1/1:6,0:6:15.03:285,15,0
chr10	26139136	.	CGTGT	C	4624.78	PASS	AB=0.851;AC=30;AF=0.536;AN=56;BaseQRankSum=-6.480;DP=820;FS=86.980;HRun=0;HaplotypeScore=213.9649;InbreedingCoeff=-0.6664;MQ=45.09;MQ0=13;MQRankSum=0.974;QD=5.88;ReadPosRankSum=-3.997;VQSLOD=-0.3091;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:35,2:32:99:255,0,129	0/1:10,1:12:31.48:31,0,51	0/0:20,0:9:3.01:0,3,33	0/0:13,0:4:2.98:0,3,21	0/1:16,4:22:38.24:86,0,38	0/1:19,2:21:99:132,0,139	1/1:28,12:33:2.87:50,3,0	0/1:20,0:20:37.84:38,0,84	0/1:21,6:27:88.34:129,0,88	0/1:35,1:32:99:158,0,136	1/1:8,2:10:14.80:137,15,0	0/1:24,9:33:99:339,0,117	0/1:25,3:27:86.31:161,0,86	0/1:28,9:33:28.46:261,0,28	0/1:20,3:23:6.79:184,0,7	0/1:14,3:17:61.18:203,0,61	0/1:26,0:24:25.89:44,0,26	1/1:14,4:16:0.05:242,0,0	0/1:24,0:23:19.52:29,0,20	0/1:16,2:19:81.93:96,0,82	0/1:113,16:104:29.43:666,0,29	0/1:27,3:30:99:163,0,138	1/1:23,2:24:10.11:131,10,0	0/1:29,13:38:43.56:352,0,44	0/1:19,6:24:21.36:216,0,21	0/1:17,4:19:72.07:187,0,72	0/1:13,3:12:20.39:145,0,20	0/1:16,4:20:5.37:190,0,5
chr10	26139225	.	GCGTTCC	G	2948.19	PASS	AB=0.934;AC=29;AF=0.518;AN=56;BaseQRankSum=0.977;DP=454;FS=4.211;HRun=0;HaplotypeScore=118.9026;InbreedingCoeff=-0.3050;MQ=40.04;MQ0=22;MQRankSum=-0.175;QD=8.72;ReadPosRankSum=-6.273;VQSLOD=-0.1111;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:12,2:12:76.56:77,0,83	0/1:8,0:8:91.63:92,0,98	0/0:32,0:20:54.88:0,55,1614	0/0:29,0:17:47.70:0,48,1310	1/1:4,1:5:3.01:36,3,0	1/1:6,1:5:9.03:165,9,0	1/1:7,1:7:5.78:139,6,0	0/0:19,0:9:18.05:0,18,308	0/1:10,0:7:31.79:127,0,32	1/1:10,0:8:21.07:444,21,0	0/1:9,0:9:62.95:63,0,73	0/1:24,1:19:99:168,0,369	0/1:18,0:15:99:178,0,241	0/1:20,0:12:89.63:157,0,90	0/1:14,0:13:95.53:428,0,96	1/1:6,0:6:9.03:146,9,0	0/1:29,0:27:76.68:77,0,750	0/1:17,0:15:35.84:106,0,36	0/0:11,0:6:15.02:0,15,242	0/1:6,1:6:88.50:89,0,150	0/1:72,1:50:98.04:98,0,519	0/1:13,2:14:99:120,0,286	0/1:4,1:4:34.80:57,0,35	0/0:23,2:21:5.99:0,6,50	0/1:6,1:7:26.93:103,0,27	0/1:17,0:13:88.50:88,0,281	1/1:3,1:4:4.71:89,5,0	0/1:3,6:9:70.14:70,0,148
chr10	26139230	.	C	CGTGTGTGT	6283.22	PASS	AB=0.886;AC=48;AF=0.857;AN=56;BaseQRankSum=2.359;DP=457;FS=38.224;HRun=0;HaplotypeScore=121.1874;InbreedingCoeff=0.2774;MQ=38.40;MQ0=22;MQRankSum=-0.620;QD=16.03;ReadPosRankSum=-4.405;VQSLOD=0.9677;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,1:12:14.63:196,15,0	1/1:6,0:8:9.07:241,9,0	0/0:31,0:17:37.38:0,37,671	0/0:34,0:20:41.06:0,41,696	1/1:5,0:5:2.38:72,2,0	1/1:4,0:4:9.03:185,9,0	1/1:5,0:6:6.49:168,6,0	0/1:17,0:7:6.75:10,0,7	1/1:10,0:7:9.01:163,9,0	1/1:11,0:10:22.63:461,23,0	1/1:1,7:13:6.46:93,6,0	1/1:15,5:17:20.01:553,20,0	1/1:14,2:16:28.93:602,29,0	1/1:18,2:14:18.03:319,18,0	1/1:11,0:12:20.87:456,21,0	1/1:1,0:8:12.01:162,12,0	0/1:30,0:29:64.30:117,0,64	1/1:3,12:19:6.49:138,6,0	1/1:8,3:7:3.62:280,4,0	1/1:4,1:4:8.71:185,9,0	1/1:68,1:49:40.35:388,40,0	0/1:12,0:11:1.68:191,0,2	1/1:5,1:5:6.02:113,6,0	1/1:22,1:20:2.62:25,3,0	1/1:6,0:8:9.37:199,9,0	0/1:3,7:12:21.40:474,0,21	1/1:2,1:4:12.03:278,12,0	1/1:8,1:9:7.17:215,7,0
chr10	26139261	.	G	GCA	1260.24	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=2.443;DP=536;FS=23.996;HRun=0;HaplotypeScore=140.2854;InbreedingCoeff=0.7436;MQ=60.19;MQ0=9;MQRankSum=-2.746;QD=22.50;ReadPosRankSum=-0.067;VQSLOD=1.7217;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:22:23.61:0,24,307	0/0:7,0:7:10.32:0,10,167	0/0:32,0:18:45.04:0,45,596	0/0:28,0:20:42.07:0,42,701	0/0:13,0:13:14.84:0,15,210	0/0:8,0:8:14.30:0,14,148	0/0:22,0:19:26.26:0,26,302	1/1:5,12:13:33.58:502,34,0	0/0:18,0:16:30.07:0,30,382	0/0:15,0:15:40.62:0,41,445	0/0:15,0:15:8.83:0,9,204	0/0:27,0:21:18.32:0,18,272	0/0:22,0:21:28.71:0,29,289	0/0:29,0:26:21.51:0,22,231	0/0:14,0:13:11.89:0,12,156	0/0:15,0:15:19.87:0,20,284	1/1:5,27:33:51.17:879,51,0	0/0:19,0:19:20.81:0,21,221	0/0:13,0:13:29.81:0,30,311	0/1:6,0:6:0.61:1,0,96	0/0:50,0:38:45.26:0,45,521	0/0:12,0:12:20.90:0,21,239	0/0:12,0:12:21.07:0,21,289	0/0:33,0:28:12.15:0,12,149	0/0:11,0:11:21.86:0,22,231	0/0:18,0:15:36.92:0,37,415	0/0:14,0:13:31:0,31,252	0/0:7,0:7:5.61:0,6,53
chr10	26139409	.	TG	T	13644.85	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-4.275;DP=597;FS=0.618;HRun=7;HaplotypeScore=68.4799;InbreedingCoeff=0.9970;MQ=85.56;MQ0=0;MQRankSum=-10.365;QD=24.85;ReadPosRankSum=5.388;VQSLOD=5.0855;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,38:42:99:1071,105,0	1/1:1,12:13:27.06:276,27,0	0/0:20,0:19:42.12:0,42,496	0/0:28,0:28:75.19:0,75,886	1/1:1,12:13:33.07:335,33,0	1/1:0,21:21:54.08:540,54,0	1/1:4,30:33:81.18:826,81,0	1/1:1,21:22:63.10:627,63,0	1/1:2,16:18:45.10:459,45,0	1/1:3,20:23:54.10:544,54,0	1/1:1,9:10:26.93:260,27,0	1/1:3,23:26:60.14:612,60,0	1/1:2,18:20:51.11:520,51,0	1/1:2,22:24:51.12:520,51,0	1/1:2,17:19:48.11:489,48,0	1/1:1,23:24:66.15:673,66,0	1/1:0,30:30:69.16:704,69,0	1/1:3,10:13:27.06:275,27,0	1/1:4,12:16:33.06:335,33,0	1/1:2,9:11:24.05:245,24,0	1/1:4,34:38:93.18:939,93,0	1/1:2,18:20:48.11:489,48,0	1/1:1,13:14:39.08:392,39,0	1/1:4,23:27:60.13:612,60,0	1/1:1,18:19:45.10:458,45,0	1/1:0,18:18:51:497,51,0	1/1:2,18:20:54.12:551,54,0	1/1:0,14:14:39.09:398,39,0
chr10	26140268	.	G	GAC	6529.09	PASS	AB=0.696;AC=43;AF=0.796;AN=54;BaseQRankSum=-9.107;DP=331;FS=26.391;HRun=0;HaplotypeScore=56.3445;InbreedingCoeff=0.5557;MQ=74.84;MQ0=2;MQRankSum=2.152;QD=25.41;ReadPosRankSum=4.295;VQSLOD=3.4449;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,26:32:57.14:960,57,0	1/1:2,1:3:3.01:48,3,0	0/0:19,0:16:15.86:0,16,204	0/1:24,0:21:3.10:3,0,205	1/1:1,3:4:6.02:97,6,0	1/1:7,9:16:24.08:387,24,0	1/1:6,10:16:15.05:242,15,0	0/0:35,0:35:41.24:0,41,228	1/1:1,3:4:9.03:143,9,0	0/1:1,6:7:15.36:225,0,15	1/1:2,9:11:24.08:387,24,0	1/1:1,7:8:21.07:339,21,0	1/1:2,6:8:15.05:242,15,0	1/1:3,5:8:12.04:194,12,0	0/0:1,0:7:14.20:0,14,70	1/1:1,4:4:9.03:145,9,0	0/0:13,0:12:11.36:0,11,56	1/1:2,12:14:13.21:464,13,0	1/1:5,9:14:4.87:407,5,0	1/1:1,7:8:15.05:242,15,0	1/1:3,8:12:21.07:339,21,0	./.	1/1:1,4:5:9.03:145,9,0	0/1:2,9:11:15.05:269,0,15	1/1:1,8:9:18.06:290,18,0	1/1:3,14:18:42.10:622,42,0	1/1:4,7:11:15.05:242,15,0	1/1:6,3:9:6.02:97,6,0
chr10	26140280	.	CACACATATACACA	C	2693.92	PASS	AC=4;AF=0.074;AN=54;BaseQRankSum=-2.948;DP=315;FS=42.929;HRun=0;HaplotypeScore=127.0381;InbreedingCoeff=0.7616;MQ=69.25;MQ0=2;MQRankSum=-2.979;QD=49.89;ReadPosRankSum=-2.441;VQSLOD=1.3645;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:69.24:0,69,3635	0/0:1,0:1:3.01:0,3,178	0/0:18,0:14:26.09:0,26,1312	0/0:20,0:17:45.07:0,45,1447	0/0:5,0:5:12.04:0,12,583	0/0:13,0:13:33.08:0,33,1689	0/0:14,0:14:18.46:0,18,960	1/1:9,30:39:54.69:2318,55,0	0/0:5,0:5:12.04:0,12,644	0/0:8,0:8:24.08:0,24,1194	0/0:12,0:12:33.11:0,33,1785	0/0:7,0:7:21.07:0,21,1178	0/0:6,0:6:15.05:0,15,782	0/0:9,0:9:21.07:0,21,1095	0/0:8,0:8:18.06:0,18,807	0/0:4,0:3:9.03:0,9,535	1/1:3,12:14:12.04:491,12,0	0/0:16,0:16:42.10:0,42,2209	0/0:11,0:11:33.11:0,33,1596	0/0:8,0:8:15.05:0,15,892	0/0:10,0:10:21.07:0,21,1124	./.	0/0:4,0:4:9.03:0,9,497	0/0:11,0:11:21.07:0,21,1117	0/0:9,0:9:21.07:0,21,1111	0/0:16,0:16:45.15:0,45,2243	0/0:10,0:10:24.08:0,24,1260	0/0:4,0:4:6.02:0,6,356
chr10	26140694	.	CT	C	13939.57	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-0.443;DP=493;FS=22.346;HRun=5;HaplotypeScore=53.9014;InbreedingCoeff=0.9804;MQ=90.03;MQ0=0;MQRankSum=-9.695;QD=30.77;ReadPosRankSum=6.749;VQSLOD=2.7825;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,27:28:78.22:885,78,0	1/1:0,8:8:24.07:272,24,0	0/0:18,1:19:42.14:0,42,556	0/0:21,0:21:60.20:0,60,810	1/1:0,19:19:51.14:578,51,0	1/1:2,22:24:63.18:715,63,0	1/1:0,11:11:27.08:306,27,0	1/1:0,27:27:81.23:919,81,0	1/1:1,22:23:60.17:681,60,0	1/1:0,22:22:66.17:737,66,0	1/1:0,11:11:27.08:306,27,0	1/1:0,11:11:33.09:374,33,0	1/1:0,17:17:45.13:510,45,0	1/1:2,10:12:30.09:340,30,0	1/1:0,31:31:84.24:953,84,0	1/1:2,15:17:45.13:511,45,0	1/1:2,10:11:27.08:306,27,0	1/1:0,18:18:51.15:579,51,0	1/1:4,11:15:33.09:373,33,0	1/1:0,16:16:48.14:545,48,0	1/1:0,20:20:54.15:613,54,0	1/1:0,6:6:15.04:170,15,0	1/1:0,7:7:14.88:170,15,0	1/1:1,14:15:39.11:442,39,0	1/1:1,21:22:60.17:681,60,0	1/1:0,21:21:63.18:715,63,0	1/1:3,25:28:75.21:851,75,0	1/1:0,12:12:36.10:408,36,0
chr10	26140787	.	TG	T	6949.60	PASS	AB=1.000;AC=53;AF=0.946;AN=56;BaseQRankSum=-4.781;DP=534;FS=0.000;HRun=2;HaplotypeScore=79.3723;InbreedingCoeff=0.6124;MQ=76.33;MQ0=5;MQRankSum=-0.591;QD=13.68;ReadPosRankSum=0.817;VQSLOD=3.8923;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:22:47.37:378,47,0	1/1:4,0:4:7.72:55,8,0	0/1:35,0:17:4.67:5,0,188	0/0:26,0:15:10.95:0,11,158	1/1:23,3:26:12.01:304,12,0	1/1:25,5:31:39.98:416,40,0	1/1:6,10:16:10.43:100,10,0	1/1:20,4:24:63.15:593,63,0	1/1:23,4:27:18.61:256,19,0	1/1:16,1:17:37.43:259,37,0	1/1:10,5:15:41.02:396,41,0	1/1:11,1:12:18.29:123,18,0	1/1:15,1:16:16.11:106,16,0	1/1:14,2:17:43.15:333,43,0	1/1:12,11:23:59.97:621,60,0	1/1:17,1:18:21.97:164,22,0	1/1:3,16:18:18.43:175,18,0	1/1:15,1:16:36.17:250,36,0	1/1:9,0:9:17.28:124,17,0	1/1:12,2:14:27.08:200,27,0	1/1:17,3:20:47.07:389,47,0	1/1:18,1:20:14.56:132,15,0	1/1:18,4:22:46.06:366,46,0	1/1:11,0:11:11.61:65,12,0	1/1:22,2:24:44.73:306,45,0	1/1:16,3:20:41.63:332,42,0	1/1:20,3:23:49.30:373,49,0	1/1:4,2:6:13.73:128,14,0
chr10	26141815	.	TATATATATATATGTGG	T	1981.88	PASS	AB=1.000;AC=23;AF=0.719;AN=32;BaseQRankSum=3.020;DP=131;FS=16.691;HRun=0;HaplotypeScore=72.5511;InbreedingCoeff=0.4260;MQ=60.20;MQ0=3;MQRankSum=-5.550;QD=37.39;ReadPosRankSum=2.645;VQSLOD=0.8586;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:7,0:2:5.89:0,6,37	0/0:16,0:2:1.03:0,1,67	./.	1/1:2,3:5:6.02:171,6,0	./.	0/0:35,0:35:67.89:0,68,3024	1/1:3,0:3:3.01:84,3,0	./.	1/1:1,1:2:3.01:136,3,0	./.	1/1:0,4:4:9.03:407,9,0	1/1:1,1:2:3.01:136,3,0	0/1:5,0:5:33.37:76,0,33	./.	0/0:11,0:11:27.02:0,27,1236	1/1:8,0:8:9.03:228,9,0	1/1:1,0:1:2.99:24,3,0	./.	./.	./.	./.	./.	1/1:2,7:9:6.01:164,6,0	1/1:4,0:4:9.03:225,9,0	1/1:1,3:4:3.01:136,3,0	1/1:4,2:6:11.71:319,12,0
chr10	26141817	.	TATATATATATGTGG	T	1834.27	PASS	AB=1.000;AC=23;AF=0.719;AN=32;BaseQRankSum=2.620;DP=128;FS=13.492;HRun=0;HaplotypeScore=68.7306;InbreedingCoeff=0.4225;MQ=63.49;MQ0=3;MQRankSum=-4.871;QD=36.69;ReadPosRankSum=2.747;VQSLOD=1.1619;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:8,0:3:5.99:0,6,63	0/0:16,0:2:0.38:0,0,43	./.	1/1:4,0:4:6.02:154,6,0	./.	0/0:37,0:37:84.24:0,84,2651	1/1:2,0:2:3.01:62,3,0	./.	1/1:2,0:2:3.01:101,3,0	./.	1/1:4,0:4:9.03:304,9,0	1/1:2,0:2:3.01:101,3,0	0/1:5,0:5:18.08:93,0,18	./.	0/0:12,0:12:30.03:0,30,1105	1/1:3,5:8:9.03:367,9,0	1/1:1,0:1:2.99:24,3,0	./.	./.	./.	./.	./.	1/1:8,0:8:6.02:166,6,0	1/1:5,0:5:9.03:211,9,0	1/1:4,0:4:3.01:101,3,0	1/1:5,0:5:11.87:271,12,0
chr10	26141827	.	TGTGG	T	959.52	PASS	AB=1.000;AC=27;AF=0.750;AN=36;BaseQRankSum=1.852;DP=127;FS=4.430;HRun=0;HaplotypeScore=51.9887;InbreedingCoeff=0.5320;MQ=86.96;MQ0=3;MQRankSum=-4.840;QD=20.86;ReadPosRankSum=1.658;VQSLOD=2.7509;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,0:1:3.01:62,3,0	./.	0/0:12,0:5:8.50:0,8,43	0/0:19,0:8:5.65:0,6,65	./.	1/1:3,1:4:6.02:85,6,0	./.	0/0:32,0:32:79.06:0,79,1520	1/1:2,0:2:6.02:123,6,0	1/1:2,0:2:6.02:123,6,0	1/1:1,0:1:3.01:31,3,0	./.	1/1:4,0:4:9.02:94,9,0	1/1:1,0:1:3.01:31,3,0	0/1:6,0:6:0.80:1,0,20	./.	0/0:17,0:17:42.07:0,42,618	1/1:5,0:5:9.02:97,9,0	1/1:1,0:1:2.99:24,3,0	./.	./.	./.	./.	./.	1/1:7,1:8:6.02:85,6,0	1/1:1,3:4:9.03:142,9,0	1/1:3,0:3:3.01:31,3,0	1/1:2,2:4:12.03:161,12,0
chr10	26141831	.	GAT	G	1333.45	PASS	AB=1.000;AC=26;AF=0.765;AN=34;BaseQRankSum=-2.478;DP=136;FS=0.000;HRun=0;HaplotypeScore=49.7647;InbreedingCoeff=0.3480;MQ=87.63;MQ0=3;MQRankSum=-2.345;QD=11.40;ReadPosRankSum=3.129;VQSLOD=3.1765;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:2,0:2:4.51:0,5,23	./.	0/0:13,0:5:5.88:0,6,36	0/1:22,0:10:12.06:12,0,55	./.	1/1:4,0:4:2.80:13,3,0	./.	1/1:13,20:33:60.18:743,60,0	0/0:3,0:3:4.81:0,5,30	0/1:2,0:2:1.13:3,0,1	1/1:2,0:2:2.80:13,3,0	./.	1/1:4,0:4:8.39:40,8,0	1/1:1,0:1:2.80:13,3,0	1/1:0,0:7:11.36:56,11,0	./.	1/1:2,15:17:36.11:446,36,0	1/1:6,0:6:8.39:39,8,0	./.	./.	./.	./.	./.	./.	1/1:8,0:8:3.27:14,3,0	1/1:4,0:4:2.79:13,3,0	1/1:3,0:3:2.80:13,3,0	1/1:4,0:4:5.59:26,6,0
chr10	26145733	.	A	ATATCT	38625.80	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-3.918;DP=512;FS=0.000;HRun=0;HaplotypeScore=97.2096;InbreedingCoeff=0.9209;MQ=66.92;MQ0=0;MQRankSum=-7.865;QD=79.31;ReadPosRankSum=4.366;VQSLOD=6.7761;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,18:23:60.21:1807,60,0	1/1:1,9:10:27.09:861,27,0	0/0:15,0:15:33.10:0,33,795	0/0:10,0:10:12.25:0,12,438	1/1:4,30:33:84.25:2525,84,0	1/1:6,18:24:72.25:2103,72,0	1/1:2,5:8:18.06:539,18,0	1/1:15,23:39:99:3310,111,0	1/1:2,14:17:48.16:1484,48,0	1/1:6,14:19:57.19:1737,57,0	1/1:3,17:21:51.18:1629,51,0	1/1:2,10:13:33.11:1011,33,0	1/1:0,11:11:27.09:869,27,0	1/1:2,11:15:39.13:1194,39,0	1/1:0,16:19:45.15:1453,45,0	1/1:2,10:12:27.09:861,27,0	1/1:5,12:18:42.14:1324,42,0	1/1:3,6:10:24.08:758,24,0	1/1:3,10:16:45.15:1257,45,0	1/1:7,35:43:99:3729,123,0	1/1:2,5:7:9.03:290,9,0	1/1:2,16:19:51.13:1511,51,0	1/1:4,23:29:72.20:2196,72,0	1/1:0,11:11:27.09:866,27,0	1/1:1,14:15:39.13:1217,39,0	1/1:3,13:17:51.13:1558,51,0	1/1:3,22:29:72.25:2247,72,0	1/1:2,4:6:9.03:290,9,0
chr10	26147253	.	G	GA	2940.09	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-9.406;DP=617;FS=1.469;HRun=5;HaplotypeScore=59.0860;InbreedingCoeff=0.9978;MQ=61.55;MQ0=1;MQRankSum=-0.518;QD=33.79;ReadPosRankSum=-1.682;VQSLOD=3.5132;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:96.07:0,96,989	0/0:11,0:11:33.08:0,33,355	0/0:20,0:18:45.07:0,45,468	0/0:19,0:17:39.07:0,39,404	0/0:34,0:34:93.23:0,93,999	0/0:18,0:18:48.10:0,48,507	0/0:12,0:12:30.05:0,30,313	1/1:2,34:36:99:1310,102,0	0/0:14,0:14:36.09:0,36,387	0/0:19,0:19:48.11:0,48,511	0/0:30,0:30:87.22:0,87,935	0/0:8,0:8:24.06:0,24,258	0/0:29,0:29:81.10:0,81,838	0/0:15,0:15:45.11:0,45,484	1/1:2,8:10:24.08:316,24,0	0/0:17,0:17:48.12:0,48,516	1/1:2,38:40:99:1457,111,0	0/0:23,0:23:63.16:0,63,677	0/0:20,0:18:45.10:0,45,477	0/0:42,0:42:99:0,117,1257	0/0:15,0:15:42.11:0,42,451	0/0:21,0:21:63.16:0,63,677	0/0:26,0:26:69.17:0,69,739	0/0:13,0:13:27.07:0,27,290	0/0:21,0:21:63.14:0,63,668	0/0:19,0:19:54.13:0,54,580	0/0:28,0:28:84.16:0,84,876	0/0:20,0:20:60.15:0,60,645
chr10	26153532	.	G	GA	604.74	PASS	AB=0.912;AC=7;AF=0.125;AN=56;BaseQRankSum=2.800;DP=609;FS=3.414;HRun=10;HaplotypeScore=83.4002;InbreedingCoeff=0.5230;MQ=69.06;MQ0=5;MQRankSum=-2.366;QD=6.50;ReadPosRankSum=-0.340;VQSLOD=1.9094;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:77.87:0,78,640	0/0:5,0:6:17.02:0,17,129	0/0:23,0:20:24.98:0,25,167	0/1:14,1:12:3.77:4,0,124	0/0:23,0:23:53.92:0,54,443	0/0:16,1:18:11.98:0,12,291	0/0:17,1:18:3.99:0,4,239	1/1:28,0:22:49.39:275,49,0	0/0:22,0:23:47.93:0,48,394	0/0:28,0:28:59.88:0,60,490	0/0:24,1:26:22.24:0,22,496	0/0:18,0:19:49.93:0,50,400	0/0:9,0:9:23.97:0,24,197	0/0:12,0:12:26.97:0,27,222	0/0:28,0:29:70.90:0,71,564	0/0:20,0:19:47.93:0,48,394	1/1:32,0:30:70.59:441,71,0	0/0:17,0:17:32.96:0,33,271	0/0:28,0:24:44.21:0,44,368	0/0:34,1:35:63.87:0,64,728	0/0:21,0:21:53.92:0,54,440	0/0:21,0:21:53.92:0,54,440	0/0:20,0:21:61.97:0,62,498	0/1:7,1:8:8.01:8,0,148	0/0:18,0:18:44.94:0,45,369	0/0:24,0:24:50.91:0,51,416	0/0:36,2:38:25.89:0,26,622	0/1:9,1:9:11.03:11,0,127
chr10	26153536	.	A	AG	1708.31	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=-4.919;DP=602;FS=1.751;HRun=0;HaplotypeScore=77.8896;InbreedingCoeff=0.8319;MQ=67.38;MQ0=7;MQRankSum=-2.006;QD=24.06;ReadPosRankSum=0.409;VQSLOD=4.7959;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:96.13:0,96,1207	0/0:7,0:7:20.98:0,21,249	0/0:24,0:17:46.44:0,46,484	0/1:15,0:10:3.64:4,0,249	0/0:22,0:22:66.18:0,66,858	0/0:19,0:19:47.91:0,48,637	0/0:16,0:16:31.71:0,32,502	1/1:2,26:22:66.08:826,66,0	0/0:23,0:23:57.17:0,57,750	0/0:30,0:30:90.23:0,90,1113	0/0:28,0:28:72.01:0,72,986	0/0:19,0:19:57.10:0,57,735	0/0:8,0:8:24.08:0,24,335	0/0:12,0:12:30.09:0,30,403	0/0:28,0:28:75.20:0,75,1008	0/0:23,0:22:57.13:0,57,743	1/1:1,27:26:72.24:1002,72,0	0/0:16,0:15:36.10:0,36,484	0/0:27,0:23:59.45:0,59,754	0/0:34,0:34:93.13:0,93,1316	0/0:18,0:18:54.18:0,54,752	0/0:21,0:21:63.19:0,63,827	0/0:22,0:21:63.17:0,63,856	0/0:9,0:9:20.88:0,21,313	0/0:17,0:17:45.15:0,45,628	0/0:22,0:22:63.15:0,63,815	0/0:38,0:38:95.80:0,96,1297	0/0:10,0:9:20.88:0,21,299
chr10	26156721	.	CAG	C	21596.87	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=4.531;DP=655;FS=3.601;HRun=0;HaplotypeScore=87.7710;InbreedingCoeff=0.9991;MQ=92.42;MQ0=3;MQRankSum=-8.426;QD=39.27;ReadPosRankSum=8.646;VQSLOD=6.5486;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,27:27:69.23:1016,69,0	1/1:0,15:15:42.14:618,42,0	0/0:28,0:29:77.93:0,78,1289	0/0:25,0:25:70.38:0,70,1155	1/1:1,33:35:96.28:1389,96,0	1/1:0,25:25:60.20:883,60,0	1/1:0,27:27:78.26:1148,78,0	0/0:28,0:28:81.28:0,81,1509	1/1:0,19:19:51.17:751,51,0	1/1:1,24:25:72.24:1059,72,0	1/1:0,24:24:63.21:928,63,0	1/1:0,20:20:60.20:883,60,0	1/1:1,10:11:30.10:442,30,0	1/1:1,12:13:30.10:442,30,0	1/1:1,19:20:54.18:795,54,0	1/1:0,18:18:51.17:751,51,0	0/0:23,0:23:66.23:0,66,1222	1/1:0,10:10:24.08:353,24,0	1/1:2,15:17:45.14:638,45,0	1/1:2,33:34:93.27:1345,93,0	1/1:3,22:25:60.20:883,60,0	1/1:1,27:28:78.26:1148,78,0	1/1:1,24:24:60.20:883,60,0	1/1:0,13:13:33.11:486,33,0	1/1:1,29:30:78.26:1147,78,0	1/1:0,34:34:99:1492,102,0	1/1:0,31:30:81.14:1192,81,0	1/1:0,23:23:63.21:926,63,0
chr10	26160053	.	CCTT	C	20965.44	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=6.842;DP=590;FS=0.000;HRun=0;HaplotypeScore=107.3493;InbreedingCoeff=0.9869;MQ=69.36;MQ0=1;MQRankSum=-4.325;QD=42.79;ReadPosRankSum=7.937;VQSLOD=5.6954;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,33:33:75.26:1278,75,0	1/1:0,6:6:12.04:204,12,0	0/0:28,0:24:69.24:0,69,1507	0/0:24,0:23:63.19:0,63,1319	1/1:2,18:20:33.11:563,33,0	1/1:2,20:21:45.15:767,45,0	1/1:2,18:20:54.18:920,54,0	0/0:25,0:24:66.22:0,66,1437	1/1:1,25:25:66.23:1125,66,0	1/1:1,34:35:99:1723,102,0	1/1:0,18:18:45.15:767,45,0	1/1:0,15:15:42.14:716,42,0	1/1:0,16:15:41.96:715,42,0	1/1:0,18:17:48.16:818,48,0	1/1:0,20:20:51.17:867,51,0	1/1:0,18:18:51.17:869,51,0	0/0:23,0:23:66.20:0,66,1420	1/1:1,13:14:36.12:614,36,0	1/1:0,21:21:63.18:981,63,0	1/1:2,25:27:72.25:1226,72,0	1/1:2,26:28:51.17:869,51,0	1/1:0,20:20:57.20:971,57,0	1/1:1,19:20:51:859,51,0	1/1:1,22:23:47.96:818,48,0	1/1:0,13:13:33.11:561,33,0	1/1:0,25:25:75.24:1251,75,0	1/1:0,27:27:72.25:1227,72,0	1/1:0,5:5:15.05:256,15,0
chr10	26160480	.	TG	T	2241.92	PASS	AB=0.933;AC=43;AF=0.768;AN=56;BaseQRankSum=14.521;DP=524;FS=10.289;HRun=2;HaplotypeScore=299.7860;InbreedingCoeff=0.5985;MQ=37.79;MQ0=9;MQRankSum=-8.569;QD=5.51;ReadPosRankSum=7.076;VQSLOD=-0.5490;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:30:29.85:138,30,0	1/1:8,0:8:12.16:42,12,0	0/0:13,0:2:6.02:0,6,84	0/0:15,0:4:12.04:0,12,174	1/1:27,0:27:50.43:183,50,0	1/1:23,0:23:44.70:165,45,0	1/1:12,0:12:7.14:37,7,0	0/0:36,0:34:99:0,99,1458	1/1:22,0:22:38.25:128,38,0	1/1:17,0:16:32.95:136,33,0	1/1:17,0:17:35.25:216,35,0	1/1:22,0:22:31.12:117,31,0	1/1:17,0:17:21.34:70,21,0	1/1:17,0:16:31.94:122,32,0	0/0:22,0:22:66.19:0,66,945	1/1:21,0:21:35.94:121,36,0	0/0:31,0:31:93.30:0,93,1365	0/1:11,0:11:28.23:28,0,154	0/1:12,4:12:21.91:38,0,22	1/1:24,0:24:22.12:108,22,0	1/1:12,0:12:7.11:23,7,0	1/1:22,0:22:41.55:168,42,0	0/1:21,0:21:13.57:112,0,14	1/1:10,0:10:4.74:15,5,0	1/1:9,0:9:17.74:85,18,0	1/1:20,0:20:44.97:196,45,0	1/1:27,0:26:46.59:165,47,0	1/1:2,0:2:2.37:8,2,0
chr10	26160481	.	GGAA	G	7338.74	PASS	AB=0.717;AC=43;AF=0.768;AN=56;BaseQRankSum=14.306;DP=418;FS=10.123;HRun=0;HaplotypeScore=280.6820;InbreedingCoeff=0.6065;MQ=39.48;MQ0=7;MQRankSum=-7.154;QD=24.22;ReadPosRankSum=7.450;VQSLOD=3.4484;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,13:17:36.32:326,36,0	1/1:0,5:5:15.04:161,15,0	0/0:11,0:2:6.02:0,6,135	0/0:16,0:5:15.05:0,15,325	1/1:2,20:22:62.15:613,62,0	1/1:4,16:20:51.54:525,52,0	1/1:4,2:6:14.50:116,14,0	0/0:35,0:33:99:0,99,2406	1/1:3,15:18:47.48:481,47,0	1/1:3,12:14:39.58:417,40,0	1/1:3,11:14:31.99:276,32,0	1/1:4,12:16:42.07:427,42,0	1/1:0,9:9:27.02:272,27,0	1/1:2,11:13:35.08:355,35,0	0/0:22,0:22:66.20:0,66,1533	1/1:3,14:17:47.77:484,48,0	0/0:31,0:31:93.32:0,93,2237	0/1:7,4:11:99:103,0,321	0/1:10,2:9:20.19:78,0,20	1/1:5,14:19:11:421,11,0	1/1:3,3:6:9.02:96,9,0	1/1:2,17:19:49.90:491,50,0	0/1:3,11:14:38.72:264,0,39	1/1:0,3:3:5.13:61,5,0	1/1:1,6:7:20.68:187,21,0	1/1:4,14:18:53.15:532,53,0	1/1:4,17:21:60.11:620,60,0	1/1:0,1:1:3.01:33,3,0
chr10	26160483	.	A	AT	291.76	PASS	AB=0.992;AC=15;AF=0.268;AN=56;BaseQRankSum=-3.864;DP=409;FS=16.894;HRun=0;HaplotypeScore=287.4125;InbreedingCoeff=-0.1904;MQ=38.47;MQ0=7;MQRankSum=5.480;QD=1.59;ReadPosRankSum=-8.944;VQSLOD=-0.2119;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:16,0:16:15.27:49,0,15	0/0:5,0:5:0.03:0,0,14	0/0:13,0:3:6.02:0,6,84	0/0:17,0:5:15.05:0,15,210	0/0:20,1:21:10.24:0,10,83	0/1:20,0:20:25.13:25,0,59	1/1:4,0:4:0.45:12,0,0	0/0:37,0:35:99:0,99,1366	0/0:15,3:18:12.84:0,13,72	0/1:15,0:14:21.03:21,0,37	0/1:14,0:14:10.88:98,0,11	0/1:14,0:14:8.64:9,0,40	0/0:9,0:9:18.33:0,18,56	0/1:13,0:13:31.86:32,0,40	0/0:21,0:21:63.20:0,63,861	0/0:14,2:16:11.37:0,11,66	0/0:30,0:30:90.29:0,90,1245	0/0:11,0:11:24.04:0,24,208	0/1:10,0:7:17.89:23,0,18	0/1:18,0:18:8.51:9,0,54	0/0:3,3:6:6.11:0,6,19	0/1:18,0:18:0.87:1,0,56	0/1:14,0:14:30.10:30,0,64	0/1:3,0:3:1.43:7,0,1	0/1:7,0:7:14.79:41,0,15	0/1:16,2:18:43.56:78,0,44	0/0:19,0:19:14.42:0,14,84	0/0:1,0:1:2.04:0,2,6
chr10	26160485	.	TCTCAGGGTTGTTTTGATTTGC	T	36594.44	PASS	AB=0.638;AC=44;AF=0.786;AN=56;BaseQRankSum=14.704;DP=393;FS=10.191;HRun=0;HaplotypeScore=308.8982;InbreedingCoeff=0.6821;MQ=37.50;MQ0=5;MQRankSum=-8.288;QD=133.56;ReadPosRankSum=8.003;VQSLOD=3.3942;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,13:14:35.95:1692,36,0	1/1:0,5:5:15.05:789,15,0	0/0:12,0:3:9.03:0,9,532	0/0:17,0:5:15.05:0,15,935	1/1:1,20:21:63.22:3182,63,0	1/1:3,16:19:54.14:2603,54,0	1/1:0,2:2:6.02:311,6,0	0/0:38,0:36:99:0,108,7979	1/1:2,15:17:48.16:2422,48,0	1/1:1,12:12:36.12:1809,36,0	1/1:2,11:13:37.35:1582,37,0	1/1:1,12:13:39.13:2001,39,0	1/1:0,9:9:27.09:1402,27,0	1/1:2,11:13:39.13:1827,39,0	0/0:21,0:21:63.20:0,63,5673	1/1:1,14:15:45.15:2278,45,0	0/0:31,0:31:93.29:0,93,7749	0/1:7,4:11:99:606,0,743	1/1:7,2:6:9.01:342,9,0	1/1:4,14:18:45.15:2267,45,0	1/1:2,3:5:9.03:473,9,0	1/1:1,17:18:54.05:2632,54,0	0/1:2,11:13:99:1638,0,166	1/1:0,3:3:5.70:313,6,0	1/1:1,6:7:21.07:992,21,0	1/1:3,14:17:51.18:2436,51,0	1/1:1,17:18:54.19:2839,54,0	1/1:0,1:1:3.01:158,3,0
chr10	26161208	.	GT	G	10965.97	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=5.891;DP=539;FS=0.525;HRun=7;HaplotypeScore=56.1024;InbreedingCoeff=0.9909;MQ=55.79;MQ0=3;MQRankSum=0.781;QD=23.79;ReadPosRankSum=5.541;VQSLOD=4.6285;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,31:33:55.09:700,55,0	1/1:0,11:11:27.53:276,28,0	0/0:16,0:9:23.94:0,24,282	0/0:10,1:6:15:0,15,167	1/1:0,29:27:48.11:489,48,0	1/1:1,32:31:84.19:856,84,0	1/1:0,7:7:21.05:214,21,0	0/0:29,0:29:72.22:0,72,895	1/1:2,16:18:42.09:427,42,0	1/1:2,23:23:63.14:642,63,0	1/1:2,24:26:68.95:674,69,0	1/1:1,10:11:27.06:275,27,0	1/1:0,12:12:26.91:275,27,0	1/1:2,13:15:33.07:337,33,0	1/1:2,22:23:51.11:519,51,0	1/1:0,14:14:42.10:428,42,0	0/0:21,0:22:52.02:0,52,681	1/1:2,18:19:48.11:489,48,0	1/1:1,8:9:21.04:213,21,0	1/1:3,31:33:87.19:887,87,0	1/1:2,11:13:30.07:306,30,0	1/1:2,16:18:42.09:428,42,0	1/1:2,20:21:45.10:459,45,0	1/1:1,8:9:24.05:245,24,0	1/1:1,16:17:42.09:428,42,0	1/1:2,19:20:54.11:543,54,0	1/1:2,20:20:51.11:519,51,0	1/1:0,14:12:33.07:336,33,0
chr10	26161971	.	GT	G	16707.06	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-1.702;DP=661;FS=4.352;HRun=6;HaplotypeScore=70.1818;InbreedingCoeff=0.9975;MQ=63.73;MQ0=5;MQRankSum=5.808;QD=27.43;ReadPosRankSum=5.866;VQSLOD=5.1397;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:4,19:22:52.65:577,53,0	1/1:0,12:12:30.07:322,30,0	0/0:29,0:21:60.11:0,60,741	0/0:23,0:17:29.99:0,30,410	1/1:2,35:37:99:1064,99,0	1/1:0,30:30:81.20:870,81,0	1/1:0,16:16:45.11:484,45,0	1/1:7,30:34:87.16:908,87,0	1/1:0,12:12:30.07:322,30,0	1/1:1,43:44:99:1355,129,0	1/1:0,22:22:54.13:580,54,0	1/1:0,23:23:63.16:677,63,0	1/1:0,19:19:54.14:580,54,0	1/1:1,23:24:51.37:662,51,0	1/1:1,32:33:84.21:903,84,0	1/1:3,13:16:33.08:353,33,0	1/1:1,30:31:66.17:709,66,0	1/1:1,9:10:27.07:290,27,0	1/1:2,17:17:44.40:428,44,0	1/1:3,24:27:69.13:727,69,0	1/1:0,22:22:57.14:613,57,0	1/1:0,17:17:48.12:515,48,0	1/1:2,26:28:72.18:773,72,0	1/1:3,10:13:27.07:290,27,0	1/1:2,11:13:27.07:290,27,0	1/1:1,33:34:99:1027,99,0	1/1:0,30:30:84.21:902,84,0	1/1:2,15:17:45.11:483,45,0
chr10	26163460	.	CT	C	613.67	PASS	AB=0.909;AC=7;AF=0.125;AN=56;BaseQRankSum=6.275;DP=585;FS=1.064;HRun=12;HaplotypeScore=99.2077;InbreedingCoeff=0.7219;MQ=61.90;MQ0=0;MQRankSum=-0.934;QD=7.31;ReadPosRankSum=1.683;VQSLOD=2.7355;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:16:33:0,33,334	0/0:12,0:13:32.90:0,33,319	0/1:9,1:7:17.08:17,0,25	0/0:19,1:17:0.54:0,1,138	0/0:28,1:29:45.62:0,46,597	0/0:21,2:23:10.61:0,11,459	0/0:18,0:22:53.57:0,54,479	1/1:5,15:20:41.82:325,42,0	0/0:16,0:22:38.74:0,39,358	0/0:39,0:39:98.71:0,99,982	0/0:24,2:26:13.63:0,14,491	0/0:18,0:18:36.05:0,36,351	0/0:21,0:22:42.11:0,42,428	0/0:16,1:17:12.80:0,13,285	1/1:7,1:29:43.49:140,43,0	0/0:15,1:17:15.67:0,16,315	1/1:11,14:25:35.77:279,36,0	0/0:14,0:14:10.43:0,10,216	0/0:15,0:16:29.86:0,30,279	0/0:26,1:27:46.77:0,47,640	0/0:15,0:17:32.74:0,33,303	0/0:24,1:27:30.52:0,31,448	0/0:24,0:25:57.11:0,57,579	0/0:12,1:14:9.82:0,10,276	0/0:21,0:21:42.08:0,42,422	0/0:28,0:28:60.08:0,60,583	0/0:24,0:23:45.06:0,45,443	0/0:4,0:4:12.02:0,12,122
chr10	26166280	.	TAA	T	10033.43	PASS	AB=0.769;AC=49;AF=0.875;AN=56;BaseQRankSum=3.227;DP=539;FS=9.303;HRun=12;HaplotypeScore=137.3167;InbreedingCoeff=0.7722;MQ=71.04;MQ0=2;MQRankSum=-3.063;QD=21.03;ReadPosRankSum=4.585;VQSLOD=2.8794;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,20:24:45.03:458,45,0	1/1:1,8:8:21.04:214,21,0	0/0:14,0:12:14.09:0,14,123	0/1:7,0:8:17.98:18,0,75	1/1:4,18:22:36.02:366,36,0	1/1:2,22:25:62.87:622,63,0	1/1:0,13:13:39.09:397,39,0	0/0:11,0:32:69.12:0,69,712	1/1:9,14:23:39.03:397,39,0	1/1:5,22:27:60.06:602,60,0	1/1:3,18:21:39:397,39,0	1/1:7,9:16:20.96:214,21,0	1/1:6,15:21:33.01:336,33,0	1/1:2,13:15:36.05:366,36,0	1/1:1,16:17:36.07:366,36,0	1/1:3,12:15:33.06:336,33,0	0/0:1,0:16:39.04:0,39,370	1/1:3,16:19:39.06:397,39,0	1/1:3,9:12:24:244,24,0	1/1:7,40:47:99:1068,105,0	1/1:0,8:8:15.02:153,15,0	1/1:3,21:24:54.09:549,54,0	1/1:3,21:25:50.31:499,50,0	1/1:1,5:6:12.02:122,12,0	1/1:2,19:21:48.08:488,48,0	1/1:5,23:28:69.13:702,69,0	1/1:1,24:28:59.34:696,59,0	1/1:0,1:1:3.01:31,3,0
chr10	26169416	.	ATTTTT	A	13187.29	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-5.242;DP=442;FS=25.948;HRun=14;HaplotypeScore=100.1465;InbreedingCoeff=0.9718;MQ=76.63;MQ0=0;MQRankSum=-5.220;QD=38.45;ReadPosRankSum=7.379;VQSLOD=1.5363;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,13:15:33.03:547,33,0	1/1:0,9:9:24.06:397,24,0	0/0:28,0:21:47.95:0,48,785	0/0:18,0:15:12.66:0,13,460	1/1:1,16:17:36.02:596,36,0	1/1:3,16:19:39.06:646,39,0	1/1:1,7:8:21.07:347,21,0	0/0:11,0:23:51.15:0,51,805	1/1:1,11:12:27.05:447,27,0	1/1:2,20:22:63.18:1043,63,0	1/1:5,16:21:38.97:646,39,0	1/1:0,10:11:23.98:377,24,0	1/1:1,18:19:51.14:845,51,0	1/1:1,7:8:21.05:348,21,0	0/0:4,0:15:30.07:0,30,323	1/1:2,14:16:36.09:596,36,0	0/0:5,0:14:33.11:0,33,603	1/1:3,6:9:18.02:298,18,0	1/1:4,9:13:27.01:405,27,0	1/1:1,22:23:54.05:894,54,0	1/1:3,5:8:11.97:199,12,0	1/1:0,10:11:27.04:427,27,0	1/1:2,13:15:39.10:646,39,0	1/1:2,4:6:12.02:199,12,0	1/1:1,16:17:36.07:596,36,0	1/1:3,20:24:63.15:998,63,0	1/1:2,30:32:84.24:1392,84,0	1/1:0,8:8:18.06:298,18,0
chr10	26170091	.	AAT	A	2670.58	PASS	AB=0.782;AC=44;AF=0.786;AN=56;BaseQRankSum=6.427;DP=262;FS=3.886;HRun=0;HaplotypeScore=45.2337;InbreedingCoeff=0.2597;MQ=76.97;MQ0=1;MQRankSum=-1.203;QD=12.36;ReadPosRankSum=2.690;VQSLOD=3.1245;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,7:13:18.06:220,18,0	1/1:4,4:8:6.02:73,6,0	0/0:8,0:8:3:0,3,29	0/0:7,0:6:2.68:0,3,11	1/1:4,2:6:3.01:37,3,0	1/1:4,8:12:18.06:220,18,0	0/1:9,0:9:39.66:52,0,40	0/1:29,5:34:80.13:80,0,789	1/1:1,6:7:12.04:147,12,0	1/1:4,3:8:11.85:111,12,0	1/1:2,6:8:9.03:110,9,0	1/1:2,2:4:3.01:37,3,0	0/1:3,3:6:2.27:68,0,2	1/1:4,6:10:12.04:147,12,0	0/0:11,0:11:3.01:0,3,48	1/1:2,3:5:6.02:73,6,0	0/0:20,0:20:23.91:0,24,580	0/1:4,9:13:21.59:266,0,22	1/1:10,8:17:23.42:252,23,0	1/1:1,4:5:12:131,12,0	1/1:2,2:4:6.02:73,6,0	1/1:2,2:4:3.01:37,3,0	1/1:2,1:3:3.01:37,3,0	1/1:6,0:6:3.01:36,3,0	1/1:1,8:9:15.05:183,15,0	1/1:3,5:8:15.05:183,15,0	1/1:4,5:9:15.05:183,15,0	1/1:4,3:7:6.01:62,6,0
chr10	26170411	.	A	AACACAC	1921.34	PASS	AB=0.710;AC=40;AF=0.833;AN=48;BaseQRankSum=-2.529;DP=368;FS=0.000;HRun=0;HaplotypeScore=102.9191;InbreedingCoeff=0.3404;MQ=64.90;MQ0=9;MQRankSum=0.473;QD=7.04;ReadPosRankSum=-1.799;VQSLOD=1.2122;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:13,2:19:2.81:96,3,0	0/0:2,0:3:2.13:0,2,4	./.	./.	1/1:8,3:12:3.01:94,3,0	1/1:4,3:12:3.01:96,3,0	1/1:14,0:14:15.05:287,15,0	1/1:24,0:23:2.57:13,3,0	1/1:10,0:15:3.01:37,3,0	1/1:9,0:9:8.92:114,9,0	1/1:10,0:8:2.80:25,3,0	0/1:5,0:8:0:0,0,0	1/1:7,7:18:6.02:134,6,0	./.	0/0:7,0:9:9.03:0,9,126	0/1:5,0:7:0:0,0,0	0/0:16,0:19:2.26:0,2,116	1/1:6,0:6:1.25:3,1,0	1/1:8,0:8:6:60,6,0	1/1:7,0:7:3.01:43,3,0	1/1:28,0:32:6.21:128,6,0	./.	1/1:7,0:7:12.01:133,12,0	1/1:14,0:18:3.01:39,3,0	1/1:12,0:13:5.74:191,6,0	1/1:15,0:15:14.08:251,14,0	1/1:6,0:10:9.03:173,9,0	1/1:4,0:4:6.02:115,6,0
chr10	26170430	.	A	ACACACA	1436	PASS	AB=1.000;AC=36;AF=0.818;AN=44;BaseQRankSum=-3.892;DP=387;FS=0.000;HRun=0;HaplotypeScore=97.7406;InbreedingCoeff=0.2929;MQ=44.43;MQ0=13;MQRankSum=0.721;QD=4.85;ReadPosRankSum=-1.521;VQSLOD=1.0228;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:19:2.26:94,2,0	0/0:3,0:2:2.13:0,2,4	./.	./.	1/1:13,0:13:3.01:94,3,0	1/1:14,0:14:3.01:96,3,0	1/1:15,0:15:9.03:158,9,0	0/1:27,0:26:0:0,0,0	./.	1/1:13,0:13:5.63:16,6,0	1/1:8,0:6:2.57:25,3,0	0/1:12,0:11:0.01:0,0,0	1/1:18,0:18:6.02:134,6,0	./.	0/0:13,0:12:9.03:0,9,126	0/1:12,0:11:0:0,0,0	0/1:29,0:29:6.13:6,0,73	1/1:5,0:5:0.89:2,1,0	1/1:7,0:7:6:60,6,0	1/1:6,0:6:3.01:43,3,0	1/1:32,0:29:5.74:127,6,0	./.	1/1:9,0:8:12.01:133,12,0	1/1:17,0:17:3.01:39,3,0	1/1:12,0:12:2.87:92,3,0	1/1:11,4:16:13.29:248,13,0	1/1:12,0:12:9.03:173,9,0	./.
chr10	26171405	.	C	CT	294.50	PASS	AB=0.955;AC=4;AF=0.071;AN=56;BaseQRankSum=-4.220;DP=620;FS=0.713;HRun=11;HaplotypeScore=70.0562;InbreedingCoeff=0.5155;MQ=61.78;MQ0=0;MQRankSum=0.584;QD=6.54;ReadPosRankSum=-1.445;VQSLOD=1.6614;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,1:34:17.39:0,17,462	0/1:8,1:10:4.50:5,0,142	0/0:8,1:9:11.79:0,12,81	0/0:8,0:8:8.15:0,8,87	0/0:28,1:31:40.20:0,40,477	0/0:28,2:30:10.81:0,11,446	0/0:20,0:22:48.87:0,49,360	0/0:30,0:32:60.30:0,60,451	0/0:28,0:29:42.92:0,43,466	0/0:26,0:26:33.05:0,33,368	0/0:15,0:15:23.83:0,24,186	0/0:17,0:17:35.80:0,36,279	0/0:20,0:21:40.42:0,40,339	0/0:22,1:24:18.84:0,19,320	1/1:2,17:21:37.91:388,38,0	0/0:21,0:21:50.76:0,51,390	0/0:23,0:23:44.06:0,44,347	0/0:14,0:16:27.90:0,28,193	0/0:24,1:26:31.32:0,31,413	0/0:26,1:28:25.31:0,25,368	0/0:27,0:28:64.76:0,65,493	0/0:26,0:27:56.10:0,56,426	0/0:22,0:22:44.77:0,45,348	0/0:17,0:19:45.89:0,46,335	0/0:23,1:25:37.31:0,37,461	0/0:30,0:31:73.71:0,74,563	0/1:11,0:13:1.76:2,0,122	0/0:10,0:11:23.89:0,24,186
chr10	26171975	.	C	CT	3559.52	PASS	AB=0.982;AC=43;AF=0.768;AN=56;BaseQRankSum=10.589;DP=500;FS=10.019;HRun=2;HaplotypeScore=110.8629;InbreedingCoeff=0.7070;MQ=38.45;MQ0=21;MQRankSum=-4.859;QD=9.73;ReadPosRankSum=4.860;VQSLOD=0.8187;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:19:35.49:212,35,0	1/1:13,0:13:26.12:143,26,0	0/0:23,0:8:24.07:0,24,293	0/0:21,0:13:33.10:0,33,404	0/1:17,1:14:4.33:64,0,4	1/1:31,0:27:55.61:351,56,0	1/1:8,0:6:14.51:79,15,0	0/0:46,0:45:99:0,132,1578	1/1:18,0:15:20.32:111,20,0	1/1:26,0:19:49.32:270,49,0	1/1:11,0:10:11.97:100,12,0	1/1:16,0:14:22.13:175,22,0	1/1:17,1:16:13.47:145,13,0	1/1:17,0:14:11.47:138,11,0	0/0:28,0:28:81.25:0,81,1004	1/1:15,0:11:14.35:102,14,0	0/0:16,0:16:43.69:0,44,524	1/1:9,0:9:20.32:111,20,0	1/1:10,0:10:26.10:142,26,0	1/1:14,0:12:18.38:155,18,0	0/1:12,0:11:15.15:89,0,15	1/1:16,1:15:23.35:153,23,0	0/1:15,0:11:8.99:56,0,9	1/1:14,0:12:29.23:210,29,0	1/1:17,0:14:34.94:218,35,0	1/1:20,1:16:20.72:223,21,0	1/1:20,0:19:33.62:213,34,0	1/1:6,0:6:17.44:97,17,0
chr10	26171977	.	T	TTCTC	19378.35	PASS	AB=1.000;AC=47;AF=0.839;AN=56;BaseQRankSum=-2.380;DP=489;FS=16.893;HRun=0;HaplotypeScore=76.5513;InbreedingCoeff=0.8577;MQ=38.50;MQ0=21;MQRankSum=-6.728;QD=52.23;ReadPosRankSum=2.217;VQSLOD=4.3426;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,19:20:39.12:1063,39,0	1/1:0,13:13:27.09:780,27,0	0/0:23,0:8:24.06:0,24,442	0/0:22,0:14:29.29:0,29,662	1/1:4,12:12:24.04:535,24,0	1/1:8,20:24:56.95:1391,57,0	1/1:0,8:6:15.05:433,15,0	0/0:46,0:45:99:0,135,2535	1/1:0,18:16:21.07:606,21,0	1/1:2,23:18:51.18:1474,51,0	1/1:2,8:9:24.08:662,24,0	1/1:1,15:14:39.13:1080,39,0	1/1:4,11:14:33.11:888,33,0	1/1:1,16:14:33.11:900,33,0	0/0:27,0:27:81.28:0,81,1685	1/1:2,12:10:24.08:666,24,0	0/1:17,0:17:16.54:17,0,817	1/1:0,8:9:21.07:607,21,0	1/1:2,9:11:30.10:862,30,0	1/1:3,10:11:30.10:809,30,0	1/1:1,11:11:27.05:616,27,0	1/1:2,12:12:24.08:672,24,0	1/1:3,11:10:24.08:584,24,0	1/1:5,9:13:18.11:802,18,0	1/1:1,16:15:36.12:1013,36,0	1/1:4,17:16:42.14:1124,42,0	1/1:2,15:17:45.15:1272,45,0	1/1:0,6:6:18.06:520,18,0
chr10	26172036	.	TGTGAC	T	16381.77	PASS	AB=0.548;AC=45;AF=0.804;AN=56;BaseQRankSum=11.697;DP=460;FS=67.587;HRun=0;HaplotypeScore=102.3252;InbreedingCoeff=0.8476;MQ=53.33;MQ0=9;MQRankSum=-4.012;QD=49.05;ReadPosRankSum=5.284;VQSLOD=2.4446;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,24:20:51.17:1084,51,0	1/1:0,9:9:27.09:586,27,0	0/0:21,0:12:30.10:0,30,948	0/0:16,0:14:41.87:0,42,993	1/1:1,22:22:57.20:1219,57,0	1/1:0,24:21:57.20:1219,57,0	1/1:1,8:7:18.06:390,18,0	0/0:41,0:37:99:0,111,3080	1/1:1,7:8:21.07:456,21,0	1/1:2,19:18:48.16:1042,48,0	1/1:1,15:16:42.14:894,42,0	1/1:0,13:11:33.11:716,33,0	1/1:1,13:12:27.09:568,27,0	1/1:2,8:7:18.06:373,18,0	0/0:29,0:29:87.28:0,87,2559	1/1:2,8:8:21.07:456,21,0	0/0:19,0:18:51.18:0,51,1581	1/1:1,3:3:9.03:195,9,0	1/1:3,7:8:21.07:438,21,0	1/1:2,23:25:69.24:1449,69,0	1/1:0,17:15:30.10:649,30,0	1/1:4,10:13:30.10:651,30,0	1/1:1,15:15:42.14:881,42,0	0/1:3,14:16:32.82:742,0,33	1/1:5,5:9:21.06:398,21,0	1/1:3,21:22:60.21:1289,60,0	1/1:4,8:11:27.09:555,27,0	1/1:0,2:2:6.02:130,6,0
chr10	26172994	.	ATCT	A	14705.25	PASS	AB=0.537;AC=45;AF=0.804;AN=56;BaseQRankSum=10.939;DP=525;FS=15.244;HRun=0;HaplotypeScore=73.8449;InbreedingCoeff=0.8588;MQ=54.84;MQ0=1;MQRankSum=-0.279;QD=35.26;ReadPosRankSum=7.181;VQSLOD=3.9797;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:3,19:22:78.70:672,0,79	1/1:0,6:6:6.01:96,6,0	0/0:16,0:12:34:0,34,682	0/0:13,0:10:27.09:0,27,568	1/1:2,24:25:57.19:915,57,0	1/1:4,16:20:33.11:530,33,0	1/1:4,14:14:36.12:578,36,0	0/0:32,0:32:75.25:0,75,1601	1/1:1,21:22:48.16:771,48,0	1/1:2,22:21:54.18:863,54,0	1/1:1,20:21:51.17:819,51,0	1/1:0,10:9:15.05:241,15,0	1/1:0,21:21:51.17:819,51,0	1/1:1,22:23:51.17:819,51,0	0/0:20,0:20:57.20:0,57,1259	1/1:0,19:19:45.15:723,45,0	0/0:26,0:26:69.24:0,69,1522	1/1:0,8:8:18.06:289,18,0	1/1:3,12:13:33.11:530,33,0	1/1:1,25:26:66.02:1006,66,0	1/1:1,6:7:18.02:261,18,0	1/1:1,18:19:48.16:771,48,0	1/1:2,20:22:54.18:868,54,0	1/1:0,11:10:24.08:386,24,0	1/1:0,15:15:36.12:579,36,0	1/1:1,20:20:51.17:819,51,0	1/1:3,23:26:53.97:868,54,0	1/1:1,14:15:30.10:482,30,0
chr10	26173324	.	ATT	A	13587.25	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-11.325;DP=648;FS=2.148;HRun=11;HaplotypeScore=98.3646;InbreedingCoeff=0.9939;MQ=63.85;MQ0=5;MQRankSum=-1.802;QD=24.61;ReadPosRankSum=7.801;VQSLOD=4.4037;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,17:21:42:447,42,0	1/1:2,8:10:14.98:160,15,0	0/0:25,0:25:45.22:0,45,523	0/0:15,0:15:37.22:0,37,486	1/1:2,29:32:83.91:873,84,0	1/1:3,24:27:63.15:670,63,0	1/1:2,9:11:21.05:223,21,0	0/0:9,0:35:68.23:0,68,265	1/1:1,16:17:39.09:411,39,0	1/1:7,25:31:69.11:789,69,0	1/1:0,22:22:51.11:543,51,0	1/1:3,15:18:39.09:415,39,0	1/1:3,16:19:48.11:511,48,0	1/1:4,22:26:66.16:702,66,0	1/1:1,19:20:54.05:560,54,0	1/1:2,28:30:72.17:766,72,0	0/0:6,0:20:33.63:0,34,137	1/1:6,9:15:27.05:287,27,0	1/1:3,15:18:42.06:438,42,0	1/1:3,27:31:66.10:758,66,0	1/1:1,19:20:48.10:511,48,0	1/1:4,24:28:60.12:638,60,0	1/1:2,25:27:63.11:670,63,0	1/1:2,13:15:33.07:351,33,0	1/1:0,26:27:63.11:726,63,0	1/1:3,28:30:81.18:854,81,0	1/1:3,22:25:63.07:658,63,0	1/1:9,19:25:60.09:625,60,0
chr10	26173605	.	GTTTCT	G	940.74	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.857;DP=661;FS=4.712;HRun=0;HaplotypeScore=123.4026;InbreedingCoeff=0.9947;MQ=59.94;MQ0=1;MQRankSum=1.887;QD=39.20;ReadPosRankSum=0.630;VQSLOD=3.5392;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:81.17:0,81,2287	0/0:8,0:8:24.08:0,24,728	0/0:25,0:15:36.08:0,36,948	0/0:17,0:13:23.63:0,24,548	0/0:31,0:31:90.30:0,90,2618	0/0:28,0:28:78.27:0,78,2362	0/0:10,0:10:30.10:0,30,873	0/0:35,0:34:96.32:0,96,2848	0/0:23,0:23:69.24:0,69,2077	0/0:33,0:33:90.29:0,90,2640	0/0:23,0:23:69.24:0,69,2072	0/0:12,0:12:33.11:0,33,980	0/0:18,0:18:48.16:0,48,1437	0/0:22,0:22:63.20:0,63,1829	1/1:5,19:24:51.17:1036,51,0	0/0:17,0:17:45.15:0,45,1364	0/0:26,0:27:71.78:0,72,2105	0/0:26,0:26:66.20:0,66,1888	0/0:23,0:24:60.21:0,60,1778	0/0:28,0:28:81.28:0,81,2441	0/0:17,0:17:45.14:0,45,1298	0/0:26,0:26:72.23:0,72,2098	0/0:20,0:20:57.20:0,57,1723	0/0:18,0:18:35.96:0,36,1418	0/0:34,0:34:96.31:0,96,2836	0/0:35,0:35:99:0,99,2931	0/0:31,0:31:90.31:0,90,2697	0/0:17,0:17:51.18:0,51,1538
chr10	26173820	.	TTG	T	17460.17	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=14.065;DP=688;FS=2.085;HRun=0;HaplotypeScore=128.1033;InbreedingCoeff=0.9809;MQ=65.81;MQ0=1;MQRankSum=-5.773;QD=32.88;ReadPosRankSum=8.673;VQSLOD=5.9781;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:5,25:30:59.30:809,59,0	1/1:0,7:7:21.07:279,21,0	0/0:31,0:30:84.28:0,84,1423	0/0:39,0:36:72.19:0,72,1494	1/1:3,27:30:68.94:783,69,0	1/1:2,24:26:63.21:851,63,0	1/1:3,13:16:36.12:486,36,0	0/0:38,0:38:93.30:0,93,1559	1/1:3,24:27:66.22:892,66,0	1/1:1,20:21:60.20:809,60,0	1/1:3,26:29:75.15:972,75,0	1/1:1,16:17:48.16:645,48,0	1/1:0,22:22:57.19:766,57,0	1/1:3,22:25:60.20:807,60,0	0/0:27,0:27:75.24:0,75,1270	1/1:1,23:24:60.20:811,60,0	0/0:19,2:21:7.90:0,8,747	1/1:2,24:26:66.22:891,66,0	1/1:5,15:19:45.08:560,45,0	1/1:1,21:22:54.18:726,54,0	1/1:2,26:28:66.22:892,66,0	1/1:3,22:25:66.22:892,66,0	1/1:0,19:19:51.13:664,51,0	1/1:0,18:18:48.16:648,48,0	1/1:2,25:27:65.95:859,66,0	1/1:0,27:27:78.25:1039,78,0	1/1:3,33:36:81.13:1094,81,0	1/1:1,8:9:21.07:284,21,0
chr10	26174157	.	G	GT	546.74	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-5.671;DP=589;FS=3.256;HRun=6;HaplotypeScore=91.5562;InbreedingCoeff=0.9253;MQ=53.71;MQ0=7;MQRankSum=1.187;QD=28.78;ReadPosRankSum=-1.048;VQSLOD=3.5725;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:75.15:0,75,756	0/0:7,0:7:21.05:0,21,214	0/0:24,0:5:9.01:0,9,86	0/0:24,0:11:30.06:0,30,305	0/0:37,0:37:84.19:0,84,854	0/0:13,0:13:36.07:0,36,362	0/0:15,0:15:39.09:0,39,398	0/0:31,0:31:75.15:0,75,754	0/0:24,0:24:60.13:0,60,612	0/0:24,0:24:57.12:0,57,581	0/0:33,0:32:85.05:0,85,847	0/0:17,0:17:45.08:0,45,452	0/0:22,0:22:63.14:0,63,643	0/0:16,0:16:32.79:0,33,429	1/1:0,19:19:51.16:642,51,0	0/0:12,0:12:33.05:0,33,324	0/0:34,0:34:93.17:0,93,933	0/0:18,0:18:48.11:0,48,489	0/0:16,0:12:33.07:0,33,336	0/0:28,0:28:72.15:0,72,727	0/0:16,0:16:48.09:0,48,482	0/0:21,0:21:60.10:0,60,601	0/0:20,0:20:57.13:0,57,579	0/0:12,0:10:27.06:0,27,275	0/0:24,0:23:63.12:0,63,635	0/0:25,0:25:72.16:0,72,734	0/0:23,0:23:66.15:0,66,673	0/0:6,0:6:15.03:0,15,153
chr10	26174464	.	CT	C	14953.55	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=12.161;DP=548;FS=2.606;HRun=4;HaplotypeScore=133.6762;InbreedingCoeff=0.9822;MQ=55.63;MQ0=0;MQRankSum=-8.884;QD=33.08;ReadPosRankSum=1.820;VQSLOD=3.4332;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,18:18:45.14:538,45,0	1/1:1,4:5:15.02:165,15,0	0/0:12,0:12:30.07:0,30,392	0/0:17,0:14:36.10:0,36,439	1/1:4,33:36:96.27:1120,96,0	1/1:2,24:26:75.20:872,75,0	1/1:4,24:28:84.22:965,84,0	0/0:20,0:20:54.18:0,54,756	1/1:4,12:16:48.09:528,48,0	1/1:2,27:29:84.26:1006,84,0	1/1:4,19:22:54.16:646,54,0	1/1:0,13:13:39.12:463,39,0	1/1:2,22:24:69.21:822,69,0	1/1:3,16:19:57.16:671,57,0	0/0:24,0:24:72.22:0,72,977	1/1:2,20:22:66.18:767,66,0	0/0:23,0:23:57.17:0,57,765	1/1:3,8:10:24.02:287,24,0	1/1:5,14:19:51.14:599,51,0	1/1:5,23:28:81.22:946,81,0	1/1:2,13:14:39.04:436,39,0	1/1:1,22:23:66.20:788,66,0	1/1:1,19:20:60.17:706,60,0	1/1:0,11:11:30.09:359,30,0	1/1:0,16:16:48.15:575,48,0	1/1:2,25:27:81.24:961,81,0	1/1:3,16:19:57.06:624,57,0	1/1:0,3:3:9.03:108,9,0
chr10	26174490	.	G	GT	15156.80	PASS	AB=0.571;AC=45;AF=0.804;AN=56;BaseQRankSum=13.673;DP=599;FS=0.419;HRun=5;HaplotypeScore=151.0229;InbreedingCoeff=0.9019;MQ=51.96;MQ0=3;MQRankSum=-5.842;QD=31.06;ReadPosRankSum=2.288;VQSLOD=2.6424;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,21:26:63.14:760,63,0	1/1:3,5:8:21.03:246,21,0	0/0:16,0:12:24.06:0,24,253	0/0:22,0:19:48.09:0,48,499	1/1:5,38:42:99:1298,108,0	1/1:3,21:24:63.16:779,63,0	1/1:9,22:31:72.18:887,72,0	0/0:28,0:28:81.17:0,81,855	1/1:1,13:14:39.11:481,39,0	1/1:10,22:32:73.10:901,73,0	1/1:2,21:23:66.08:778,66,0	1/1:0,14:14:39.13:500,39,0	1/1:5,23:28:75.22:936,75,0	1/1:4,20:24:57.17:713,57,0	0/0:25,0:25:66.16:0,66,709	1/1:1,23:24:63.20:806,63,0	0/0:19,0:19:51.13:0,51,548	0/1:2,6:7:4.06:174,0,4	1/1:4,18:19:48.14:600,48,0	1/1:2,25:27:81.20:986,81,0	1/1:1,12:12:29.96:328,30,0	1/1:2,21:23:60.19:767,60,0	1/1:1,20:21:60.19:767,60,0	1/1:4,5:9:18.02:212,18,0	1/1:4,18:22:54.17:677,54,0	1/1:3,27:30:84.25:1056,84,0	1/1:8,9:17:33.03:391,33,0	1/1:1,3:3:9.03:115,9,0
chr10	26174496	.	C	CT	14969.08	PASS	AB=1.000;AC=45;AF=0.804;AN=56;BaseQRankSum=13.928;DP=581;FS=3.068;HRun=5;HaplotypeScore=146.0817;InbreedingCoeff=0.8980;MQ=47.60;MQ0=3;MQRankSum=-5.795;QD=31.32;ReadPosRankSum=2.907;VQSLOD=2.8350;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:27:59.57:733,60,0	1/1:7,0:7:18.06:226,18,0	0/0:15,0:11:30.07:0,30,370	0/0:19,0:16:48.13:0,48,601	1/1:44,0:43:99:1368,116,0	1/1:22,0:22:64.03:779,64,0	1/1:30,0:30:70.06:858,70,0	0/0:26,0:26:78.25:0,78,1013	1/1:13,0:13:36.11:456,36,0	1/1:27,0:27:69.67:874,70,0	1/1:23,0:23:63.09:752,63,0	1/1:14,0:14:39.12:494,39,0	1/1:25,0:25:72.22:911,72,0	1/1:24,0:24:55.03:687,55,0	0/0:23,0:23:69.22:0,69,894	1/1:24,0:24:63.20:809,63,0	0/0:20,0:20:54.18:0,54,700	0/1:9,0:8:4.81:174,0,5	1/1:22,0:19:44.72:575,45,0	1/1:27,0:27:79.44:961,79,0	1/1:13,0:12:30.43:328,30,0	1/1:22,0:22:60.19:772,60,0	1/1:22,0:22:63.19:788,63,0	1/1:7,0:7:18.90:214,19,0	1/1:20,0:20:51.14:658,51,0	1/1:32,0:32:83.80:1051,84,0	1/1:13,7:20:29.10:388,29,0	1/1:4,0:3:9.03:115,9,0
chr10	26174934	.	TG	T	16720.13	PASS	AB=0.519;AC=45;AF=0.804;AN=56;BaseQRankSum=13.198;DP=560;FS=2.709;HRun=1;HaplotypeScore=89.1060;InbreedingCoeff=0.8877;MQ=69.82;MQ0=0;MQRankSum=-1.874;QD=38.09;ReadPosRankSum=5.343;VQSLOD=5.1781;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,25:26:26.01:840,26,0	1/1:0,4:4:12.04:168,12,0	0/0:22,0:21:60.20:0,60,937	0/0:15,0:15:44.73:0,45,642	1/1:0,30:30:87.29:1210,87,0	1/1:0,25:25:63.21:881,63,0	1/1:0,15:15:39.13:545,39,0	0/0:32,0:32:96.31:0,96,1511	1/1:0,17:17:42.14:587,42,0	1/1:0,29:29:87.29:1214,87,0	1/1:0,28:28:81.27:1132,81,0	1/1:0,17:17:51.17:713,51,0	1/1:0,16:16:42.14:587,42,0	1/1:0,16:16:39.13:546,39,0	0/0:25,0:25:75.26:0,75,1197	1/1:0,21:21:63.21:881,63,0	0/0:27,0:27:81.28:0,81,1294	0/1:1,13:14:8.27:425,0,8	1/1:0,10:10:30.10:419,30,0	1/1:0,36:36:96.32:1342,96,0	1/1:0,13:13:39.13:545,39,0	1/1:0,19:19:48.16:671,48,0	1/1:0,19:19:51.17:713,51,0	1/1:1,15:16:47.52:637,48,0	1/1:0,19:19:54.18:755,54,0	1/1:0,30:30:87.28:1199,87,0	1/1:0,15:15:39.13:545,39,0	1/1:0,4:4:12.04:164,12,0
chr10	26175272	.	C	CT	15040.51	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-5.998;DP=556;FS=8.457;HRun=6;HaplotypeScore=65.7052;InbreedingCoeff=0.9776;MQ=56.20;MQ0=0;MQRankSum=0.260;QD=33.06;ReadPosRankSum=5.209;VQSLOD=4.3568;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,23:26:75.09:879,75,0	1/1:0,6:6:18.06:224,18,0	0/0:22,0:18:45.09:0,45,453	0/0:13,0:12:20.31:0,20,309	1/1:5,23:28:81.14:945,81,0	1/1:3,26:28:72.22:893,72,0	1/1:4,12:16:45.14:565,45,0	0/0:38,0:37:90.19:0,90,914	1/1:1,10:11:33.11:415,33,0	1/1:4,25:29:81.26:1016,81,0	1/1:1,19:20:57.18:717,57,0	1/1:4,13:17:42.08:509,42,0	1/1:2,22:24:72.16:868,72,0	1/1:1,16:18:51.16:639,51,0	0/0:6,0:6:15.03:0,15,153	1/1:2,6:8:21.07:264,21,0	0/0:22,0:22:54.12:0,54,551	1/1:3,23:26:69.04:830,69,0	1/1:9,11:20:45.12:543,45,0	1/1:1,28:29:75.24:943,75,0	1/1:1,11:12:36.10:440,36,0	1/1:1,20:21:54.17:679,54,0	1/1:5,20:25:63.16:770,63,0	1/1:2,10:12:8.76:318,9,0	1/1:0,10:10:24.08:302,24,0	1/1:6,27:33:87.27:1080,87,0	1/1:3,19:22:60.19:755,60,0	1/1:2,11:13:36.11:448,36,0
chr10	26175346	.	A	AG	18439.68	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-5.061;DP=554;FS=0.453;HRun=1;HaplotypeScore=63.2329;InbreedingCoeff=0.9719;MQ=59.09;MQ0=2;MQRankSum=-3.146;QD=39.57;ReadPosRankSum=2.541;VQSLOD=5.5027;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,30:34:84.27:1230,84,0	1/1:0,7:7:21.07:314,21,0	0/0:16,0:13:32.50:0,32,336	0/0:9,0:6:18.06:0,18,226	1/1:0,27:27:66.05:932,66,0	1/1:5,20:25:75.22:1064,75,0	1/1:0,11:11:27.09:405,27,0	0/0:32,0:31:93.28:0,93,1173	1/1:1,15:16:48.03:662,48,0	1/1:2,27:29:81.27:1196,81,0	1/1:0,24:24:69.06:977,69,0	1/1:0,15:15:42.14:622,42,0	1/1:2,31:33:93.20:1295,93,0	1/1:2,17:19:51.15:741,51,0	0/0:12,0:11:33.10:0,33,415	1/1:0,20:20:57.06:800,57,0	0/0:17,2:19:6.23:0,6,578	1/1:5,17:22:60.19:877,60,0	1/1:1,22:22:63.16:880,63,0	1/1:5,23:28:77.80:991,78,0	1/1:0,16:16:45.15:674,45,0	1/1:2,15:17:48.06:660,48,0	1/1:1,20:21:57.09:798,57,0	1/1:0,12:12:30.10:449,30,0	1/1:0,15:15:39.13:582,39,0	1/1:2,22:24:72.20:1034,72,0	1/1:1,20:21:63.21:942,63,0	1/1:0,7:7:21.07:314,21,0
chr10	26175682	.	GT	G	13801.52	PASS	AB=0.528;AC=44;AF=0.786;AN=56;BaseQRankSum=13.235;DP=498;FS=12.651;HRun=1;HaplotypeScore=109.7599;InbreedingCoeff=0.8149;MQ=79.60;MQ0=0;MQRankSum=-4.689;QD=37.20;ReadPosRankSum=7.073;VQSLOD=3.1441;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,20:21:57.19:788,57,0	1/1:0,6:6:12.04:168,12,0	0/0:28,0:25:75.24:0,75,1164	0/0:39,0:36:99:0,108,1653	1/1:0,15:15:36.12:502,36,0	1/1:0,25:25:60.20:838,60,0	1/1:0,11:11:27.09:376,27,0	0/0:32,0:32:90.30:0,90,1415	1/1:0,20:20:60.20:832,60,0	1/1:0,22:22:60.20:838,60,0	1/1:0,15:15:39.13:545,39,0	1/1:0,16:16:48.16:670,48,0	1/1:0,15:15:42.14:587,42,0	1/1:0,8:8:24.08:335,24,0	0/0:16,0:16:48.15:0,48,734	1/1:0,13:13:39.13:545,39,0	0/0:12,0:12:36.12:0,36,575	0/1:1,14:15:2.64:542,0,3	1/1:0,13:12:36.12:498,36,0	1/1:0,18:18:45.15:629,45,0	1/1:0,24:24:60.02:839,60,0	1/1:0,17:17:51.17:713,51,0	1/1:0,21:21:54.15:734,54,0	1/1:0,12:12:30.10:419,30,0	1/1:0,19:19:48.16:671,48,0	1/1:0,13:13:39.13:545,39,0	1/1:1,17:18:54.05:727,54,0	0/1:2,12:14:53.38:461,0,53
chr10	26176068	.	A	AT	358.19	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-5.200;DP=514;FS=0.000;HRun=6;HaplotypeScore=84.0837;InbreedingCoeff=0.9632;MQ=60.94;MQ0=2;MQRankSum=0.064;QD=21.07;ReadPosRankSum=-0.490;VQSLOD=2.6161;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:20:51.11:0,51,520	0/0:6,0:6:12.02:0,12,122	0/0:12,0:10:27.05:0,27,270	0/0:13,0:12:26.89:0,27,260	0/0:19,0:17:39.09:0,39,398	0/0:15,0:14:39.05:0,39,387	0/0:15,0:15:42.08:0,42,421	0/0:38,0:37:93.20:0,93,948	0/0:14,0:14:36.08:0,36,367	0/0:27,0:27:60.13:0,60,611	0/0:18,0:18:48.11:0,48,489	0/0:15,0:15:39.07:0,39,390	0/0:21,0:21:60.14:0,60,612	0/0:15,0:15:42.08:0,42,421	1/1:2,15:17:36.12:453,36,0	0/0:19,0:19:57.13:0,57,582	0/0:21,0:21:51.11:0,51,520	0/0:31,0:31:71.54:0,72,779	0/0:22,0:21:57.13:0,57,582	0/0:15,0:15:39.09:0,39,398	0/0:11,0:11:27.03:0,27,267	0/0:13,0:12:27.06:0,27,275	0/0:17,0:17:33.07:0,33,337	0/0:13,0:13:30.07:0,30,306	0/0:24,0:23:57.12:0,57,581	0/0:30,0:30:78.18:0,78,796	0/0:21,0:21:60.12:0,60,605	0/0:11,0:11:24.04:0,24,245
chr10	26176383	.	T	TATC	20896.31	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=7.427;DP=612;FS=10.631;HRun=0;HaplotypeScore=102.0662;InbreedingCoeff=0.9409;MQ=50.04;MQ0=3;MQRankSum=-0.540;QD=42.39;ReadPosRankSum=4.939;VQSLOD=5.9962;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,29:33:57.04:1203,57,0	1/1:1,5:6:15.05:322,15,0	0/0:25,0:9:27.09:0,27,415	0/0:13,0:7:21.07:0,21,325	1/1:6,28:34:72.25:1544,72,0	1/1:1,28:29:66.23:1416,66,0	1/1:2,3:5:3.01:64,3,0	0/0:30,0:30:72.24:0,72,1108	1/1:5,22:26:48.16:1030,48,0	1/1:1,29:28:75.24:1570,75,0	1/1:1,20:21:48.16:1030,48,0	1/1:0,15:15:33.11:708,33,0	1/1:5,16:21:33.11:708,33,0	1/1:3,11:14:24.08:514,24,0	0/0:27,0:27:72.22:0,72,1070	1/1:1,13:14:30.10:643,30,0	0/0:24,0:23:57.14:0,57,833	1/1:3,15:19:42.14:901,42,0	1/1:6,12:17:39.13:789,39,0	1/1:6,22:27:45.15:966,45,0	1/1:3,17:20:39.13:838,39,0	1/1:0,14:14:24.08:515,24,0	1/1:7,20:27:35.97:773,36,0	1/1:0,14:14:39.13:838,39,0	1/1:6,21:26:20.73:1122,21,0	1/1:4,25:29:72.20:1481,72,0	1/1:9,31:39:81.18:1728,81,0	1/1:1,4:5:9.03:193,9,0
chr10	26177728	.	C	CAT	3543.33	PASS	AC=44;AF=0.880;AN=50;BaseQRankSum=0.175;DP=258;FS=1.335;HRun=0;HaplotypeScore=61.5062;InbreedingCoeff=0.5397;MQ=71.62;MQ0=0;MQRankSum=-3.457;QD=15.68;ReadPosRankSum=-0.250;VQSLOD=3.4381;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,0:9:12:106,12,0	1/1:0,0:8:15:129,15,0	0/0:5,0:3:0.41:0,0,1	0/0:10,0:9:8.45:0,8,77	1/1:1,0:17:13.01:95,13,0	1/1:9,0:13:24.45:202,24,0	1/1:0,0:5:6:52,6,0	1/1:10,26:36:40.71:1133,41,0	1/1:1,0:9:3:26,3,0	1/1:0,0:8:11.37:85,11,0	1/1:4,0:9:20.98:176,21,0	./.	1/1:4,0:9:19.99:153,20,0	1/1:0,0:4:3:26,3,0	0/0:7,0:7:18.06:0,18,225	1/1:0,0:5:14.03:109,14,0	1/1:4,8:12:24.08:396,24,0	1/1:4,0:4:1.74:25,2,0	1/1:10,0:10:11.40:78,11,0	1/1:0,0:10:8.70:80,9,0	1/1:0,0:4:3:26,3,0	./.	1/1:0,0:6:6:52,6,0	./.	1/1:0,0:17:24.11:173,24,0	1/1:0,0:14:20.99:184,21,0	1/1:6,0:12:20.99:180,21,0	1/1:0,0:5:8.04:58,8,0
chr10	26177824	.	T	TTATA	5083.85	PASS	AB=0.875;AC=44;AF=0.815;AN=54;BaseQRankSum=0.620;DP=239;FS=0.676;HRun=0;HaplotypeScore=71.8314;InbreedingCoeff=0.6151;MQ=73.57;MQ0=8;MQRankSum=-4.118;QD=31.97;ReadPosRankSum=-0.303;VQSLOD=4.3381;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,4:10:18.06:320,18,0	1/1:1,3:4:12.04:256,12,0	0/0:20,0:9:9.03:0,9,129	0/1:30,0:16:3.79:4,0,122	1/1:8,10:18:30.96:521,31,0	1/1:2,3:4:9.03:181,9,0	1/1:3,4:7:12.04:262,12,0	0/0:31,0:31:78.27:0,78,1304	1/1:0,7:7:18.06:435,18,0	1/1:3,2:5:9.03:230,9,0	1/1:3,6:9:21.07:498,21,0	1/1:4,1:4:5.63:51,6,0	1/1:3,1:4:9.03:144,9,0	1/1:0,2:2:3.01:77,3,0	0/0:6,0:6:9.03:0,9,158	1/1:1,2:3:9.03:229,9,0	0/0:23,0:23:60.16:0,60,988	1/1:4,1:5:9.03:137,9,0	1/1:5,3:8:12.04:295,12,0	1/1:2,0:2:3.01:31,3,0	0/1:4,1:5:0:0,0,0	1/1:0,1:1:3.01:65,3,0	1/1:0,1:1:3.01:65,3,0	./.	1/1:1,5:6:15.05:334,15,0	1/1:3,3:6:17.65:317,18,0	1/1:5,1:6:12.04:229,12,0	1/1:4,4:8:21.07:405,21,0
chr10	26177858	.	AC	A	2942.34	PASS	AC=42;AF=0.808;AN=52;BaseQRankSum=9.517;DP=289;FS=75.661;HRun=1;HaplotypeScore=102.1360;InbreedingCoeff=0.7345;MQ=59.38;MQ0=6;MQRankSum=-10.547;QD=20.29;ReadPosRankSum=-0.861;VQSLOD=-0.2524;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,9:10:13.46:106,13,0	1/1:0,3:3:2.96:20,3,0	0/0:26,0:12:17.57:0,18,220	0/0:30,0:12:11.99:0,12,121	1/1:0,12:12:13.93:106,14,0	1/1:0,5:5:8.95:83,9,0	1/1:0,7:7:20.94:227,21,0	0/0:44,0:44:99:0,132,2104	1/1:0,9:9:14.95:165,15,0	1/1:1,12:13:36.12:502,36,0	1/1:0,11:11:16.47:147,16,0	./.	1/1:0,7:7:5.98:62,6,0	1/1:0,2:2:3.01:42,3,0	0/0:6,0:6:12.04:0,12,192	1/1:0,3:3:5.99:63,6,0	0/0:32,0:32:90.31:0,90,1429	1/1:1,3:4:9:105,9,0	1/1:1,8:9:24.08:335,24,0	1/1:1,11:12:9.03:125,9,0	1/1:0,4:3:2.97:20,3,0	1/1:0,3:3:5.98:62,6,0	1/1:0,10:10:21.03:271,21,0	./.	1/1:0,7:7:17.93:185,18,0	1/1:0,6:6:18.04:232,18,0	1/1:0,5:5:9.02:126,9,0	1/1:0,3:3:9.03:126,9,0
chr10	26177863	.	CAT	C	86.61	PASS	AC=2;AF=0.037;AN=54;BaseQRankSum=-0.023;DP=310;FS=1.827;HRun=0;HaplotypeScore=122.6311;InbreedingCoeff=0.4205;MQ=55.36;MQ0=7;MQRankSum=0.282;QD=14.44;ReadPosRankSum=-0.671;VQSLOD=3.6378;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:11:6.70:0,7,135	0/0:5,0:5:8.04:0,8,76	0/0:27,1:12:19.68:0,20,263	0/0:26,0:11:2.88:0,3,44	0/0:15,0:15:11.73:0,12,165	0/0:6,0:6:9.03:0,9,139	0/0:7,0:7:12.04:0,12,197	0/0:48,0:48:99:0,135,2184	0/0:10,0:10:11.07:0,11,156	0/0:12,0:12:36.07:0,36,564	0/0:11,0:11:15.73:0,16,255	0/0:4,0:4:9.03:0,9,133	0/0:8,0:8:21.07:0,21,316	0/0:3,0:3:9.03:0,9,138	1/1:0,6:6:12.04:172,12,0	0/0:3,0:3:6.02:0,6,95	0/0:32,0:32:90.29:0,90,1561	0/0:5,0:5:12.04:0,12,190	0/0:10,0:10:27.08:0,27,409	0/0:13,0:13:39.13:0,39,590	0/0:7,0:6:5.05:0,5,49	0/0:4,0:4:9.03:0,9,138	0/0:11,0:11:30.10:0,30,469	./.	0/0:10,0:10:21.04:0,21,289	0/0:6,0:6:15.04:0,15,258	0/0:6,0:6:15.05:0,15,242	0/0:3,0:3:5.71:0,6,102
chr10	26177895	.	C	CATAT	11101.94	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=4.250;DP=362;FS=68.865;HRun=0;HaplotypeScore=94.9378;InbreedingCoeff=0.8745;MQ=57.06;MQ0=6;MQRankSum=-8.543;QD=48.06;ReadPosRankSum=3.555;VQSLOD=2.5492;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,6:17:21.07:377,21,0	1/1:2,5:7:6.02:154,6,0	0/0:33,0:23:57.18:0,57,966	0/0:16,0:8:21.07:0,21,356	1/1:6,11:17:27.08:607,27,0	1/1:2,5:7:9.03:230,9,0	1/1:1,7:8:9.03:230,9,0	0/0:40,0:40:93.30:0,93,1553	1/1:4,5:9:18.04:352,18,0	1/1:3,9:12:33.11:783,33,0	1/1:4,12:16:39.13:885,39,0	1/1:1,5:6:12.04:307,12,0	1/1:3,12:15:39.13:940,39,0	1/1:2,6:8:21.07:511,21,0	0/0:14,0:14:39.13:0,39,681	1/1:1,3:4:9.03:203,9,0	0/0:28,0:28:75.26:0,75,1311	1/1:2,4:7:15.05:373,15,0	1/1:9,2:10:24.06:441,24,0	1/1:4,16:20:45.15:1097,45,0	1/1:3,4:6:9.01:178,9,0	1/1:1,7:8:15.05:384,15,0	1/1:4,9:13:36.12:819,36,0	1/1:1,1:2:6.02:120,6,0	1/1:0,9:9:27.09:692,27,0	1/1:1,6:7:21.07:499,21,0	1/1:4,8:12:30.08:610,30,0	1/1:5,4:9:9.70:309,10,0
chr10	26177966	.	G	GT	9852.79	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-1.659;DP=394;FS=30.837;HRun=6;HaplotypeScore=56.0714;InbreedingCoeff=0.9890;MQ=67.18;MQ0=0;MQRankSum=-5.594;QD=32.41;ReadPosRankSum=4.435;VQSLOD=2.8342;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,22:23:57.18:717,57,0	1/1:2,6:8:18.06:226,18,0	0/0:8,0:7:18.04:0,18,182	0/0:11,0:11:25.39:0,25,232	1/1:3,17:20:51.11:610,51,0	1/1:1,9:10:27.09:340,27,0	1/1:0,13:13:39.12:491,39,0	0/0:34,0:34:87.64:0,88,876	1/1:0,9:9:27.09:340,27,0	1/1:1,11:12:30.10:377,30,0	1/1:3,16:19:45.14:566,45,0	1/1:1,15:16:45.10:548,45,0	1/1:3,11:14:33.11:415,33,0	1/1:1,10:11:30.10:378,30,0	0/0:19,0:19:48.11:0,48,490	1/1:1,9:10:24.08:302,24,0	0/0:18,0:18:48.08:0,48,481	1/1:0,13:13:39.12:490,39,0	1/1:5,18:23:57.15:700,57,0	1/1:4,15:19:45.14:566,45,0	1/1:1,10:11:30.10:377,30,0	1/1:3,9:12:27.09:336,27,0	1/1:1,11:12:33.11:415,33,0	1/1:0,7:7:21.07:264,21,0	1/1:0,9:9:24.08:302,24,0	1/1:1,10:11:30.10:377,30,0	1/1:2,15:17:42.13:528,42,0	1/1:0,5:5:15.05:189,15,0
chr10	26179214	.	A	ATAT	954.03	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-4.473;DP=597;FS=0.000;HRun=0;HaplotypeScore=82.2558;InbreedingCoeff=0.9882;MQ=82.28;MQ0=0;MQRankSum=-3.006;QD=47.70;ReadPosRankSum=0.700;VQSLOD=5.2738;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:39.13:0,39,615	0/0:8,0:8:18.06:0,18,285	0/0:21,0:21:48.16:0,48,754	0/0:13,0:13:32.93:0,33,437	0/0:36,0:36:99:0,99,1543	0/0:23,0:23:57.19:0,57,904	0/0:15,0:15:39.13:0,39,618	0/0:25,0:25:69.22:0,69,1047	0/0:27,0:27:72.23:0,72,1140	0/0:32,0:32:90.30:0,90,1406	0/0:30,0:30:81.24:0,81,1238	0/0:24,0:24:63.21:0,63,999	0/0:19,0:19:54.18:0,54,854	0/0:24,0:24:57.19:0,57,902	1/1:2,18:20:48.16:1049,48,0	0/0:23,0:23:66.23:0,66,1046	0/0:19,0:19:48.16:0,48,757	0/0:21,0:21:57.19:0,57,900	0/0:14,0:14:42.09:0,42,617	0/0:24,0:24:69.22:0,69,1069	0/0:8,0:8:24.08:0,24,381	0/0:23,0:23:66.21:0,66,1019	0/0:24,0:24:63.21:0,63,999	0/0:12,0:12:27.07:0,27,405	0/0:29,0:29:78.27:0,78,1233	0/0:27,0:27:66.22:0,66,1046	0/0:32,0:32:87.28:0,87,1356	0/0:10,0:10:30.10:0,30,476
chr10	26179328	.	GA	G	13670.24	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=4.533;DP=543;FS=0.000;HRun=5;HaplotypeScore=56.9076;InbreedingCoeff=0.9946;MQ=89.44;MQ0=0;MQRankSum=-7.113;QD=30.11;ReadPosRankSum=6.980;VQSLOD=4.3575;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,15:15:36.10:408,36,0	1/1:2,9:11:27.08:306,27,0	0/0:18,0:18:51.12:0,51,658	0/0:23,0:23:61.90:0,62,759	1/1:3,24:27:69.20:782,69,0	1/1:0,31:31:87.25:987,87,0	1/1:2,12:14:30.08:340,30,0	0/0:35,0:35:99:0,105,1400	1/1:0,19:19:57.16:647,57,0	1/1:1,20:21:60.17:681,60,0	1/1:0,17:17:42.12:476,42,0	1/1:2,15:17:42.12:476,42,0	1/1:1,18:19:54.15:613,54,0	1/1:1,24:25:63.18:715,63,0	1/1:0,23:23:63.18:715,63,0	1/1:1,17:18:51.14:579,51,0	0/0:13,0:13:39.13:0,39,532	1/1:0,12:12:30.08:340,30,0	1/1:0,23:23:69.19:775,69,0	1/1:2,18:20:51.14:578,51,0	1/1:4,20:24:54.15:613,54,0	1/1:1,12:13:36.10:408,36,0	1/1:0,19:19:57.16:645,57,0	1/1:0,13:13:33.09:374,33,0	1/1:0,9:9:27.08:306,27,0	1/1:2,24:26:72.20:817,72,0	1/1:1,30:31:81.23:919,81,0	1/1:1,6:7:15.04:170,15,0
chr10	26180002	.	GT	G	17558.23	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=10.623;DP=598;FS=1.312;HRun=2;HaplotypeScore=84.1409;InbreedingCoeff=0.9986;MQ=95.81;MQ0=0;MQRankSum=-8.354;QD=35.33;ReadPosRankSum=7.570;VQSLOD=4.3565;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,13:13:39.13:503,39,0	1/1:0,15:15:45.15:584,45,0	0/0:25,0:25:75.24:0,75,1101	0/0:30,0:30:81.25:0,81,1187	1/1:1,26:27:78.25:1012,78,0	1/1:1,24:25:72.22:921,72,0	1/1:0,16:16:45.15:584,45,0	0/0:35,0:35:99:0,105,1538	1/1:0,29:29:81.26:1051,81,0	1/1:1,24:25:72.21:907,72,0	1/1:1,20:21:42.14:545,42,0	1/1:0,22:22:63.20:817,63,0	1/1:0,23:23:66.21:856,66,0	1/1:1,20:21:54.18:700,54,0	1/1:1,23:24:66.21:856,66,0	1/1:0,26:26:72.23:932,72,0	0/0:11,0:11:33.11:0,33,494	1/1:0,11:11:30.10:389,30,0	1/1:0,21:21:63.20:818,63,0	1/1:0,26:26:72.15:911,72,0	1/1:0,24:24:66.21:854,66,0	1/1:0,17:17:36.12:467,36,0	1/1:2,21:23:54.18:701,54,0	1/1:0,16:16:42.14:545,42,0	1/1:0,20:20:48.16:623,48,0	1/1:0,25:25:75.24:971,75,0	1/1:0,20:20:57.19:739,57,0	1/1:0,7:7:21.07:272,21,0
chr10	26180238	.	G	GTT	13405.85	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-9.105;DP=502;FS=5.081;HRun=9;HaplotypeScore=56.6272;InbreedingCoeff=0.9590;MQ=76.22;MQ0=4;MQRankSum=-4.712;QD=32.86;ReadPosRankSum=3.662;VQSLOD=5.0242;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,13:16:23.87:337,24,0	1/1:0,7:7:18.06:277,18,0	0/0:15,0:14:35.82:0,36,362	0/0:14,0:14:12.61:0,13,297	1/1:5,24:28:69.23:1062,69,0	1/1:1,13:14:27.09:416,27,0	1/1:1,10:12:30.10:444,30,0	0/0:27,0:27:66.11:0,66,691	1/1:1,12:13:24.08:370,24,0	1/1:4,24:29:75.25:1144,75,0	1/1:3,20:24:60.12:858,60,0	1/1:0,13:13:39.13:600,39,0	1/1:3,8:13:25.38:337,25,0	1/1:4,9:12:18.06:277,18,0	0/0:23,0:23:63.14:0,63,670	1/1:0,8:8:21.07:323,21,0	0/0:14,0:14:42.11:0,42,447	1/1:5,15:19:37.84:537,38,0	1/1:6,17:24:54.16:784,54,0	1/1:4,18:23:54.06:753,54,0	1/1:2,1:4:6.02:85,6,0	1/1:5,20:26:57.19:859,57,0	1/1:1,24:25:63.05:965,63,0	1/1:1,10:11:21.07:323,21,0	1/1:4,15:20:42.14:639,42,0	1/1:5,19:25:63.16:908,63,0	1/1:2,24:26:57.19:878,57,0	1/1:0,11:11:15.05:231,15,0
chr10	26180528	.	GACCAGC	G	24247.01	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=8.949;DP=525;FS=0.000;HRun=0;HaplotypeScore=132.6927;InbreedingCoeff=0.9190;MQ=76.11;MQ0=1;MQRankSum=-12.868;QD=54.24;ReadPosRankSum=6.533;VQSLOD=4.8390;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,17:21:30.05:717,30,0	1/1:0,8:8:21.07:504,21,0	0/0:20,0:20:54.15:0,54,1580	0/0:19,0:19:54.12:0,54,1518	1/1:1,27:28:45.58:1027,46,0	1/1:0,24:24:45.15:1049,45,0	1/1:2,16:18:39.13:934,39,0	0/0:24,0:24:69.24:0,69,2326	1/1:2,18:20:33.11:775,33,0	1/1:1,28:29:84.28:1951,84,0	1/1:1,20:21:57.20:1342,57,0	1/1:0,15:15:33.11:777,33,0	1/1:1,17:17:42.14:1007,42,0	1/1:0,19:19:51.18:1206,51,0	1/1:0,22:22:54.19:1295,54,0	1/1:0,23:23:54.17:1294,54,0	0/0:15,0:15:45.15:0,45,1578	1/1:0,5:5:15.05:360,15,0	1/1:2,17:19:51.14:1063,51,0	1/1:0,29:29:84.20:1812,84,0	1/1:1,6:7:6.02:128,6,0	1/1:0,24:24:57.20:1359,57,0	1/1:0,21:21:48.16:1106,48,0	1/1:4,6:10:18.06:431,18,0	1/1:0,23:23:60.21:1420,60,0	1/1:1,13:14:39.13:912,39,0	1/1:0,28:28:72.25:1708,72,0	1/1:0,1:1:3.01:72,3,0
chr10	26182480	.	AT	A	13782.69	PASS	AB=0.588;AC=51;AF=0.911;AN=56;BaseQRankSum=3.231;DP=676;FS=4.931;HRun=10;HaplotypeScore=163.5970;InbreedingCoeff=0.7499;MQ=82.86;MQ0=0;MQRankSum=-7.394;QD=21.67;ReadPosRankSum=6.204;VQSLOD=3.4859;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,23:25:62.26:546,62,0	0/1:3,7:10:12.18:135,0,12	0/0:17,0:17:9.57:0,10,300	0/0:21,0:23:41.08:0,41,468	1/1:1,22:23:62.97:547,63,0	1/1:4,39:43:99:964,111,0	1/1:2,26:28:68.97:599,69,0	1/1:10,30:40:89.94:778,90,0	1/1:2,26:28:65.97:573,66,0	1/1:2,19:21:56.99:495,57,0	1/1:3,17:21:53.02:449,53,0	1/1:3,27:30:74.98:651,75,0	1/1:1,26:27:68.98:599,69,0	1/1:1,17:18:50.99:443,51,0	1/1:4,18:22:53.97:469,54,0	1/1:2,25:28:65.02:553,65,0	1/1:0,21:21:56.95:489,57,0	1/1:1,7:8:21:182,21,0	1/1:5,25:30:74.96:647,75,0	1/1:5,31:37:91.13:786,91,0	1/1:2,14:16:41.98:365,42,0	1/1:2,21:23:62.99:547,63,0	1/1:3,27:31:73.91:631,74,0	1/1:0,15:15:41.99:365,42,0	1/1:3,24:27:71.98:625,72,0	1/1:4,24:29:74:627,74,0	1/1:5,24:31:76.04:637,76,0	1/1:0,3:4:11.04:84,11,0
chr10	26183397	.	T	TATATAC	17691.34	PASS	AB=1.000;AC=45;AF=0.833;AN=54;BaseQRankSum=6.405;DP=521;FS=8.560;HRun=0;HaplotypeScore=162.1507;InbreedingCoeff=0.7619;MQ=53.33;MQ0=7;MQRankSum=-5.279;QD=42.12;ReadPosRankSum=4.410;VQSLOD=4.3892;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,16:22:9.02:164,9,0	1/1:6,0:6:12.03:219,12,0	0/0:24,0:16:42.13:0,42,891	0/0:11,0:8:9.87:0,10,170	1/1:32,0:32:57.24:1345,57,0	1/1:27,0:28:56.61:1248,57,0	1/1:4,11:16:12.04:277,12,0	0/0:29,0:29:84.10:0,84,1706	1/1:14,0:14:41.84:873,42,0	1/1:21,0:21:60.15:1533,60,0	1/1:6,0:6:9.01:160,9,0	1/1:23,0:22:57.16:1239,57,0	1/1:19,0:19:38.34:805,38,0	1/1:21,0:21:42:768,42,0	1/1:21,0:21:10.98:459,11,0	1/1:20,0:20:48.60:958,49,0	0/0:28,0:28:54.10:0,54,1058	0/1:12,0:12:18.33:353,0,18	1/1:15,0:14:38.84:753,39,0	1/1:21,0:21:51.12:1063,51,0	./.	1/1:15,0:16:30.05:530,30,0	1/1:12,0:12:33.08:707,33,0	1/1:5,12:17:6.01:68,6,0	1/1:21,0:18:45.14:1022,45,0	1/1:23,0:23:63.18:1475,63,0	1/1:31,0:31:69.09:1481,69,0	1/1:3,0:3:6.02:192,6,0
chr10	26183398	.	ATGTGTG	A	5598.06	PASS	AB=0.703;AC=44;AF=0.880;AN=50;BaseQRankSum=5.838;DP=516;FS=6.622;HRun=0;HaplotypeScore=199.1510;InbreedingCoeff=0.4012;MQ=51.73;MQ0=8;MQRankSum=-3.917;QD=13.59;ReadPosRankSum=1.939;VQSLOD=3.4611;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:19,2:21:3.06:53,3,0	1/1:4,2:6:6.02:122,6,0	./.	./.	1/1:18,12:30:23.95:343,24,0	1/1:22,5:28:23:330,23,0	1/1:16,0:16:2.32:8,2,0	0/0:31,0:31:18.05:0,18,342	1/1:9,5:14:26.72:320,27,0	1/1:18,2:20:4.09:230,4,0	1/1:6,0:6:5.81:34,6,0	1/1:14,0:22:24.08:335,24,0	0/1:13,6:19:30.46:221,0,30	1/1:13,7:21:27.45:446,27,0	0/1:9,3:20:15.62:104,0,16	1/1:14,5:20:29.27:414,29,0	0/0:23,0:29:31.64:0,32,729	1/1:11,0:12:11.77:134,12,0	1/1:12,2:13:12.03:184,12,0	1/1:14,6:21:30.63:439,31,0	./.	1/1:10,5:15:12.51:233,13,0	1/1:8,4:12:24.85:335,25,0	1/1:13,1:16:6.02:103,6,0	1/1:17,5:19:20.81:254,21,0	1/1:16,6:22:14.15:430,14,0	1/1:19,8:29:23.01:513,23,0	1/1:5,0:5:1.96:13,2,0
chr10	26183401	.	T	TAC	8297.37	PASS	AB=0.825;AC=41;AF=0.732;AN=56;BaseQRankSum=9.367;DP=488;FS=6.199;HRun=0;HaplotypeScore=160.4043;InbreedingCoeff=0.5982;MQ=49.41;MQ0=8;MQRankSum=-3.890;QD=22.79;ReadPosRankSum=5.115;VQSLOD=4.9936;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:21:8.98:86,9,0	1/1:6,0:6:11.95:118,12,0	0/0:21,0:13:38.99:0,39,524	0/0:11,0:8:6.66:0,7,101	1/1:29,0:29:55.83:664,56,0	1/1:24,2:26:51.46:628,51,0	1/1:12,0:12:3.48:35,3,0	0/0:35,0:35:96.14:0,96,1353	1/1:11,2:13:38.49:436,38,0	1/1:12,4:16:17.62:617,18,0	1/1:0,4:4:6.02:69,6,0	1/1:22,0:21:56.90:633,57,0	1/1:16,1:17:34.17:374,34,0	1/1:19,0:19:41.59:453,42,0	0/0:20,0:20:11.93:0,12,48	1/1:16,2:18:45.46:504,45,0	0/0:28,0:28:54.07:0,54,735	0/1:4,8:12:52.30:145,0,52	0/1:12,2:13:99:289,0,110	1/1:18,0:18:47.93:548,48,0	0/0:8,0:7:2.22:0,2,7	1/1:13,0:13:23.54:252,24,0	1/1:11,1:12:32.95:378,33,0	1/1:16,0:16:5.95:43,6,0	1/1:20,2:19:43.65:533,44,0	1/1:21,0:21:42.06:622,42,0	1/1:26,1:28:68.03:788,68,0	0/1:5,0:5:12.29:82,0,12
chr10	26183769	.	CA	C	16091.88	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=1.414;DP=636;FS=1.826;HRun=3;HaplotypeScore=178.6614;InbreedingCoeff=0.9236;MQ=57.72;MQ0=13;MQRankSum=0.518;QD=32.12;ReadPosRankSum=2.407;VQSLOD=3.8345;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,42:42:99:1395,114,0	1/1:1,7:8:21.07:260,21,0	0/0:16,0:6:11.67:0,12,164	0/0:11,0:3:5.81:0,6,57	1/1:0,17:17:33.10:409,33,0	1/1:1,20:21:54.17:669,54,0	1/1:1,17:18:45.14:558,45,0	0/0:35,0:24:60.20:0,60,862	1/1:0,19:19:48.15:595,48,0	1/1:0,27:27:81.22:967,81,0	1/1:0,16:16:39.12:483,39,0	1/1:2,15:17:39.12:483,39,0	1/1:1,28:29:72.13:892,72,0	1/1:0,29:29:84.26:1041,84,0	0/0:33,0:33:96.32:0,96,1382	1/1:0,24:24:66.21:818,66,0	0/0:40,0:40:99:0,117,1663	1/1:1,20:21:17.68:630,18,0	1/1:0,10:10:30.09:372,30,0	1/1:0,19:19:48.04:572,48,0	1/1:3,36:38:99:1264,102,0	1/1:1,22:23:51.16:632,51,0	1/1:0,11:11:33.10:406,33,0	1/1:2,37:39:99:1226,99,0	1/1:0,17:17:51.16:631,51,0	1/1:0,20:20:57.13:677,57,0	1/1:1,32:33:87.27:1077,87,0	1/1:1,1:2:3.01:37,3,0
chr10	26184034	.	AC	A	8420.28	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=1.287;DP=356;FS=3.570;HRun=6;HaplotypeScore=53.9006;InbreedingCoeff=0.9600;MQ=50.23;MQ0=1;MQRankSum=0.683;QD=27.07;ReadPosRankSum=3.550;VQSLOD=5.4277;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,22:23:63.16:677,63,0	1/1:0,6:6:12.03:129,12,0	0/0:11,0:8:24.06:0,24,282	0/0:10,0:7:21.07:0,21,266	1/1:0,13:13:27.07:290,27,0	1/1:1,10:11:24.06:258,24,0	1/1:3,14:15:24.06:258,24,0	0/0:9,0:7:15.05:0,15,197	1/1:0,11:11:33.08:354,33,0	1/1:0,18:18:51.13:548,51,0	1/1:1,6:7:12.03:129,12,0	1/1:3,14:17:39.10:419,39,0	1/1:3,12:15:33.06:346,33,0	1/1:2,13:15:33.08:354,33,0	1/1:1,18:19:51.13:548,51,0	1/1:1,15:16:36.09:385,36,0	0/0:15,0:14:39.13:0,39,513	1/1:0,16:16:45.11:483,45,0	1/1:1,6:6:18.05:193,18,0	1/1:1,13:14:39.10:419,39,0	1/1:1,12:13:36.09:387,36,0	1/1:0,9:9:27.07:290,27,0	1/1:0,5:5:15.04:161,15,0	1/1:1,17:18:48.12:516,48,0	1/1:0,12:12:33.08:355,33,0	1/1:0,14:14:42.07:439,42,0	1/1:0,11:11:33.08:354,33,0	1/1:0,4:4:12.03:129,12,0
chr10	26184114	.	G	GA	2999.36	PASS	AB=0.722;AC=47;AF=0.870;AN=54;BaseQRankSum=1.329;DP=104;FS=52.885;HRun=2;HaplotypeScore=72.5034;InbreedingCoeff=0.4157;MQ=56.83;MQ0=2;MQRankSum=-0.864;QD=31.24;ReadPosRankSum=3.168;VQSLOD=-0.0472;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,3:3:6.02:95,6,0	1/1:1,1:2:3.01:41,3,0	0/0:4,0:4:8.20:0,8,48	0/0:3,0:1:3:0,3,25	1/1:1,3:4:6.02:95,6,0	1/1:0,5:5:12.04:188,12,0	1/1:1,2:3:6.02:95,6,0	0/1:3,0:1:0:0,0,0	1/1:0,4:4:6.02:95,6,0	0/1:1,1:2:0:0,0,0	1/1:0,3:3:5.24:93,5,0	1/1:0,5:5:15.05:237,15,0	1/1:0,3:3:9.03:142,9,0	1/1:0,3:4:9.03:137,9,0	1/1:0,4:4:9.03:142,9,0	1/1:0,4:4:12.04:190,12,0	1/1:1,5:5:11.71:138,12,0	1/1:0,3:3:9.03:143,9,0	1/1:0,3:3:9.03:143,9,0	1/1:0,6:6:18.06:285,18,0	0/1:0,3:3:0:0,0,0	1/1:0,7:6:18.06:280,18,0	1/1:0,3:3:6.02:95,6,0	1/1:0,2:2:3.01:47,3,0	./.	1/1:0,5:5:15.05:238,15,0	1/1:1,7:4:9.03:143,9,0	1/1:0,1:1:3.01:48,3,0
chr10	26184134	.	TG	T	2234.89	PASS	AC=44;AF=0.957;AN=46;BaseQRankSum=0.866;DP=85;FS=18.573;HRun=1;HaplotypeScore=95.8912;InbreedingCoeff=0.2080;MQ=39.04;MQ0=0;MQRankSum=-1.732;QD=27.59;ReadPosRankSum=1.540;VQSLOD=2.2904;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,2:2:6.02:74,6,0	1/1:0,2:2:6.02:70,6,0	./.	0/0:1,0:1:3.01:0,3,32	1/1:1,3:3:8.97:83,9,0	1/1:0,3:3:9.02:98,9,0	1/1:0,1:1:3.01:42,3,0	./.	1/1:1,1:2:6.02:70,6,0	./.	1/1:1,3:4:8.96:83,9,0	1/1:1,3:4:12.02:141,12,0	1/1:1,1:2:6.01:67,6,0	1/1:1,2:3:9.01:88,9,0	1/1:1,5:6:18.04:199,18,0	1/1:0,5:5:15.04:169,15,0	1/1:1,3:4:10.43:96,10,0	1/1:0,3:3:2.93:37,3,0	1/1:0,3:3:9.03:121,9,0	1/1:1,6:7:21.02:245,21,0	./.	1/1:0,5:4:12.03:127,12,0	1/1:1,3:4:6.02:68,6,0	1/1:0,1:1:3.01:31,3,0	./.	1/1:0,4:4:12.03:139,12,0	1/1:0,7:4:12.03:139,12,0	1/1:5,0:5:15:139,15,0
chr10	26184135	.	G	GT	1269.99	PASS	AC=44;AF=1.000;AN=44;DP=85;FS=0.000;HRun=1;HaplotypeScore=99.9764;InbreedingCoeff=-0.0236;MQ=39.04;MQ0=0;QD=15.68;VQSLOD=3.3970;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,0:2:5.72:34,6,0	1/1:2,0:2:5.78:33,6,0	./.	./.	1/1:3,1:3:8.01:38,8,0	1/1:3,0:3:8.33:37,8,0	1/1:1,0:1:2.97:20,3,0	./.	1/1:1,1:2:5.55:27,6,0	./.	1/1:4,0:4:8.28:40,8,0	1/1:3,1:4:11.78:97,12,0	1/1:1,1:2:5.98:65,6,0	1/1:2,1:3:8.22:66,8,0	1/1:5,1:6:17.09:118,17,0	1/1:5,0:5:13.84:63,14,0	1/1:3,1:4:8.70:65,9,0	1/1:3,0:3:2.97:20,3,0	1/1:3,0:3:8.90:61,9,0	1/1:6,1:7:19.97:111,20,0	./.	1/1:5,0:4:10.75:45,11,0	1/1:3,1:4:5.47:25,5,0	1/1:1,0:1:2.50:9,2,0	./.	1/1:4,0:4:11.66:93,12,0	1/1:7,0:4:11.07:65,11,0	1/1:0,5:5:15.05:213,15,0
chr10	26184143	.	G	GA	2269.01	PASS	AC=44;AF=1.000;AN=44;DP=103;FS=0.000;HRun=2;HaplotypeScore=121.8927;InbreedingCoeff=-0.0813;MQ=27.23;MQ0=1;QD=23.15;VQSLOD=3.3650;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,1:2:3.01:33,3,0	1/1:0,2:2:6.02:72,6,0	./.	./.	1/1:0,4:3:9.03:107,9,0	1/1:0,3:3:9.02:100,9,0	./.	./.	1/1:1,2:3:9.03:107,9,0	./.	1/1:4,3:7:17.95:169,18,0	1/1:3,2:5:6.02:77,6,0	1/1:1,1:2:3.01:42,3,0	1/1:1,3:3:9.03:106,9,0	1/1:2,5:7:18.06:221,18,0	1/1:1,5:6:18.05:212,18,0	1/1:4,2:5:6.88:67,7,0	1/1:1,2:3:3.01:38,3,0	1/1:2,1:3:3.01:38,3,0	1/1:2,5:7:12.04:145,12,0	./.	1/1:2,5:5:15:152,15,0	1/1:1,4:5:8.99:91,9,0	1/1:0,1:1:3.01:32,3,0	1/1:3,1:2:6.02:72,6,0	1/1:2,3:5:12.04:154,12,0	1/1:3,4:4:9.02:100,9,0	1/1:0,5:5:15.05:208,15,0
chr10	26184147	.	T	TG	2600	PASS	AC=48;AF=1.000;AN=48;DP=102;FS=0.000;HRun=2;HaplotypeScore=100.9989;InbreedingCoeff=-0.0777;MQ=26.39;MQ0=7;QD=26.53;VQSLOD=3.2043;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,1:1:3.01:42,3,0	1/1:1,2:3:9.01:102,9,0	./.	./.	1/1:1,4:4:8.94:101,9,0	1/1:0,3:3:9.03:128,9,0	./.	1/1:2,0:1:2.97:20,3,0	1/1:0,3:3:9.03:128,9,0	1/1:2,1:3:3.01:42,3,0	1/1:1,7:7:15.05:210,15,0	1/1:1,3:4:9.03:128,9,0	1/1:1,1:1:3.01:43,3,0	1/1:1,4:3:9.03:128,9,0	1/1:0,6:6:18.06:241,18,0	1/1:1,6:6:18.06:245,18,0	1/1:1,3:3:5.69:61,6,0	1/1:1,1:2:2.94:18,3,0	1/1:0,1:1:3.01:43,3,0	1/1:3,3:6:14.96:183,15,0	./.	1/1:1,7:5:11.82:95,12,0	1/1:0,5:5:8.94:92,9,0	1/1:0,1:1:3.01:34,3,0	1/1:0,4:2:6.02:86,6,0	1/1:2,3:5:12:148,12,0	1/1:2,3:4:11.91:143,12,0	1/1:0,5:5:15.05:214,15,0
chr10	26184200	.	A	ATGGG	670.86	PASS	AB=0.870;AC=9;AF=0.346;AN=26;BaseQRankSum=1.458;DP=109;FS=0.000;HRun=0;HaplotypeScore=57.1627;InbreedingCoeff=0.0402;MQ=16.24;MQ0=74;MQRankSum=0.192;QD=14.91;ReadPosRankSum=4.144;VQSLOD=2.6318;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/0:1,0:1:2.22:0,2,7	./.	./.	0/1:5,0:5:28.39:51,0,28	./.	./.	./.	./.	0/1:7,0:4:4.70:5,0,25	0/1:6,0:2:3.66:63,0,4	./.	./.	0/0:5,0:1:2.22:0,2,7	1/1:2,6:6:18.06:415,18,0	./.	./.	./.	./.	0/1:3,0:2:2.99:57,0,3	./.	0/1:7,2:5:22.01:118,0,22	0/0:4,0:3:7.71:0,8,30	./.	0/0:8,0:1:2.92:0,3,17	1/1:3,0:1:3.01:63,3,0	0/0:5,0:1:2.50:0,2,9	0/0:4,0:2:6.02:0,6,100
chr10	26184201	.	AAAC	A	147.84	PASS	AB=0.975;AC=9;AF=0.346;AN=26;BaseQRankSum=3.624;DP=110;FS=0.000;HRun=0;HaplotypeScore=48.6936;InbreedingCoeff=0.1215;MQ=16.16;MQ0=75;MQRankSum=-0.565;QD=3.44;ReadPosRankSum=3.260;VQSLOD=1.1504;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:1,0:1:2.60:0,3,10	./.	./.	0/1:6,1:5:2.47:40,0,2	./.	./.	./.	./.	0/0:7,0:4:11.65:0,12,66	0/1:7,0:2:5.07:9,0,5	./.	./.	0/0:5,0:1:2.50:0,2,9	1/1:2,6:6:17.95:146,18,0	./.	./.	./.	./.	0/1:4,0:2:5.70:6,0,6	./.	0/1:9,0:5:24.81:25,0,32	0/0:4,0:3:8.15:0,8,35	./.	0/0:8,0:1:2.98:0,3,22	1/1:4,0:1:2.96:19,3,0	0/0:5,0:1:2.99:0,3,23	0/1:4,0:2:2.73:3,0,19
chr10	26184205	.	A	AT	584.51	PASS	AB=0.726;AC=21;AF=0.808;AN=26;BaseQRankSum=-1.235;DP=109;FS=0.000;HRun=0;HaplotypeScore=42.2610;InbreedingCoeff=-0.0028;MQ=16.24;MQ0=74;MQRankSum=0.341;QD=8.47;ReadPosRankSum=-2.087;VQSLOD=2.9127;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	1/1:0,1:1:3.01:33,3,0	./.	./.	0/1:3,4:5:1.48:59,0,1	./.	./.	./.	./.	1/1:3,4:4:11.95:138,12,0	0/1:6,1:2:1.21:30,0,1	./.	./.	1/1:4,1:1:3.01:34,3,0	1/1:8,0:6:16.78:80,17,0	./.	./.	./.	./.	0/1:2,2:2:10.29:29,0,10	./.	1/1:6,3:5:0.39:93,0,0	1/1:1,3:3:9.03:101,9,0	./.	1/1:7,1:1:3:27,3,0	0/0:4,0:1:2.92:0,3,17	1/1:4,1:1:3.01:37,3,0	1/1:4,0:2:4.07:12,4,0
chr10	26185486	.	TGG	T	7147.60	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=2.647;DP=369;FS=9.058;HRun=11;HaplotypeScore=100.3433;InbreedingCoeff=0.8657;MQ=60.11;MQ0=1;MQRankSum=-0.461;QD=22.13;ReadPosRankSum=4.257;VQSLOD=3.7979;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,18:22:33.07:346,33,0	1/1:0,4:4:9.02:96,9,0	0/0:3,0:4:3:0,3,28	0/0:10,0:9:7.49:0,7,35	1/1:5,7:12:18.02:191,18,0	1/1:3,13:16:39.03:410,39,0	1/1:0,13:12:30.07:318,30,0	0/0:5,0:10:10.45:0,10,35	1/1:2,8:10:21.05:223,21,0	1/1:2,7:9:21.05:223,21,0	1/1:2,8:10:24.03:255,24,0	1/1:2,11:12:36:355,36,0	1/1:2,11:13:33.08:351,33,0	1/1:2,11:13:30.07:318,30,0	1/1:0,0:22:28.20:100,28,0	1/1:2,16:18:42.10:447,42,0	0/0:4,0:22:39.92:0,40,137	1/1:2,12:14:32.43:339,32,0	1/1:3,8:11:24.05:255,24,0	1/1:1,10:11:30.08:319,30,0	1/1:7,18:24:41.63:446,42,0	1/1:1,15:16:30.07:319,30,0	1/1:1,6:7:15.03:160,15,0	1/1:0,18:18:48.12:510,48,0	1/1:3,4:7:15.04:158,15,0	1/1:4,15:19:45.09:469,45,0	1/1:1,14:15:42.11:447,42,0	1/1:1,3:4:9.02:91,9,0
chr10	26186258	.	G	GAATA	44825.32	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-8.216;DP=703;FS=12.448;HRun=0;HaplotypeScore=89.9494;InbreedingCoeff=0.9996;MQ=79.35;MQ0=1;MQRankSum=-10.067;QD=67.61;ReadPosRankSum=5.436;VQSLOD=6.6661;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,24:26:57.20:1519,57,0	1/1:1,14:17:38.89:1004,39,0	0/0:23,0:23:66.23:0,66,1241	0/0:17,0:17:40.98:0,41,609	1/1:2,27:32:75.26:2049,75,0	1/1:2,22:26:66.16:1742,66,0	1/1:1,18:19:54.19:1476,54,0	1/1:7,22:35:96.29:2355,96,0	1/1:2,29:33:84.29:2298,84,0	1/1:1,19:25:66.22:1696,66,0	1/1:2,13:16:45.15:1177,45,0	1/1:3,18:22:60.21:1623,60,0	1/1:1,31:33:90.31:2446,90,0	1/1:0,19:24:54.19:1472,54,0	1/1:3,23:28:60.21:1641,60,0	1/1:3,24:28:66.23:1805,66,0	1/1:0,13:14:36.12:986,36,0	1/1:1,11:13:33.11:894,33,0	1/1:2,11:18:51.16:1276,51,0	1/1:2,26:28:84.20:2115,84,0	1/1:3,26:29:72.25:1971,72,0	1/1:3,20:25:69.15:1780,69,0	1/1:2,22:27:63.09:1721,63,0	1/1:0,25:27:57.20:1560,57,0	1/1:3,21:26:63.22:1722,63,0	1/1:2,30:34:96.31:2469,96,0	1/1:2,41:46:99:3125,117,0	1/1:0,11:11:33.11:903,33,0
chr10	26186807	.	AT	A	7561.61	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=8.438;DP=364;FS=0.000;HRun=8;HaplotypeScore=47.8389;InbreedingCoeff=0.9497;MQ=70.88;MQ0=0;MQRankSum=-3.798;QD=24.87;ReadPosRankSum=4.943;VQSLOD=4.9567;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,13:16:20.76:282,21,0	1/1:0,5:5:15.02:145,15,0	0/0:6,0:6:12.03:0,12,140	0/0:7,0:7:19.87:0,20,216	1/1:1,27:28:77.99:739,78,0	1/1:1,9:10:27.04:261,27,0	1/1:1,11:12:27.04:261,27,0	0/0:30,1:31:87.09:0,87,1040	1/1:1,5:6:15.02:145,15,0	1/1:3,11:14:30.04:290,30,0	1/1:0,26:26:75.12:724,75,0	1/1:1,10:11:24.04:232,24,0	1/1:1,7:8:21.03:203,21,0	1/1:0,8:8:24.04:232,24,0	1/1:1,12:13:36.06:348,36,0	1/1:0,11:11:33.05:319,33,0	0/0:16,0:16:45.14:0,45,543	1/1:1,13:14:36.02:339,36,0	1/1:2,8:10:24.04:232,24,0	1/1:3,28:31:81.06:771,81,0	1/1:0,5:5:15.02:145,15,0	1/1:0,9:9:21.03:203,21,0	1/1:1,5:6:15.02:145,15,0	1/1:0,3:3:9.01:87,9,0	1/1:0,18:18:39.06:377,39,0	1/1:1,12:13:35.89:332,36,0	1/1:0,19:19:57.09:550,57,0	1/1:0,8:8:21.03:203,21,0
chr10	26189266	.	AT	A	15762.53	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=1.984;DP=528;FS=2.564;HRun=3;HaplotypeScore=54.5515;InbreedingCoeff=0.9938;MQ=79.26;MQ0=0;MQRankSum=-3.036;QD=33.68;ReadPosRankSum=7.411;VQSLOD=4.2325;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,17:18:48.15:594,48,0	1/1:0,9:9:27.08:335,27,0	0/0:16,0:15:36.11:0,36,494	0/0:13,0:13:32.41:0,32,378	1/1:0,35:35:99:1280,105,0	1/1:0,33:33:93.29:1153,93,0	1/1:1,9:10:24.07:298,24,0	0/0:17,0:17:48.11:0,48,638	1/1:0,17:17:48.15:595,48,0	1/1:0,24:24:72.23:892,72,0	1/1:1,18:19:51.12:615,51,0	1/1:0,12:12:33.10:409,33,0	1/1:0,19:19:57.18:707,57,0	1/1:2,17:19:48.15:595,48,0	1/1:1,18:19:42.13:520,42,0	1/1:0,18:18:51.16:632,51,0	0/0:14,0:14:36.06:0,36,459	1/1:0,9:9:18.06:223,18,0	1/1:0,17:17:51.11:593,51,0	1/1:0,38:38:99:1357,111,0	1/1:1,7:8:18.06:223,18,0	1/1:0,19:19:51.16:632,51,0	1/1:1,22:23:57.18:707,57,0	1/1:1,14:15:39.12:483,39,0	1/1:1,22:23:63.20:781,63,0	1/1:2,27:29:81.23:987,81,0	1/1:0,25:25:69.22:854,69,0	1/1:0,10:10:24.08:297,24,0
chr10	26189381	.	T	TAAAC	1581.68	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-0.881;DP=607;FS=0.747;HRun=0;HaplotypeScore=146.3989;InbreedingCoeff=0.9671;MQ=77.18;MQ0=2;MQRankSum=-5.481;QD=19.29;ReadPosRankSum=-3.115;VQSLOD=2.9114;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:24.08:0,24,383	0/0:13,0:13:24.08:0,24,383	0/0:28,0:25:11.97:0,12,162	0/0:28,0:25:18.03:0,18,214	0/0:32,0:32:60.19:0,60,935	0/0:30,0:30:69.21:0,69,1077	0/0:15,0:15:20.92:0,21,279	1/1:23,2:27:24.06:461,24,0	0/0:13,0:13:33.10:0,33,499	0/0:30,0:30:48.16:0,48,766	0/0:25,0:25:45.14:0,45,695	0/0:16,0:16:27.09:0,27,430	0/0:21,0:21:33.08:0,33,475	0/0:17,0:17:39.11:0,39,597	1/1:14,0:29:36.12:627,36,0	0/0:14,0:14:33.11:0,33,527	1/1:15,11:25:17.81:635,18,0	0/0:14,0:14:24.08:0,24,382	0/0:15,0:15:12.04:0,12,192	0/0:34,0:34:75.24:0,75,1175	0/0:17,0:17:30.10:0,30,479	0/0:19,0:19:33.11:0,33,520	0/0:25,0:25:54.16:0,54,837	0/0:23,0:23:57.19:0,57,907	0/0:18,0:18:33.11:0,33,527	0/0:19,0:19:48.16:0,48,763	0/0:29,0:28:57.19:0,57,908	0/0:18,0:18:48.16:0,48,766
chr10	26191127	.	A	AAGGTCTTTTTCAATTTTTTTTTTATCAGT	160688.31	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=4.032;DP=717;FS=7.512;HRun=0;HaplotypeScore=476.5486;InbreedingCoeff=0.9512;MQ=62.46;MQ0=0;MQRankSum=-14.252;QD=260.86;ReadPosRankSum=6.481;VQSLOD=4.5360;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:14:16.99:3432,17,0	1/1:14,0:14:42.14:4116,42,0	0/0:19,0:19:47.75:0,48,2541	0/0:18,0:17:41.81:0,42,1514	1/1:41,4:48:99:11968,120,0	1/1:29,2:32:90.31:8609,90,0	1/1:20,0:20:54.19:4522,54,0	0/0:36,0:36:99:0,105,5985	1/1:26,1:30:72.25:7619,72,0	1/1:38,2:40:99:11286,114,0	1/1:26,6:33:90.31:9779,90,0	1/1:16,2:19:48.64:5450,49,0	1/1:20,3:26:65.91:6848,66,0	1/1:22,1:24:63.22:6832,63,0	1/1:29,0:29:72.25:6588,72,0	1/1:25,2:30:75.26:7899,75,0	0/0:28,0:28:78.21:0,78,5531	1/1:4,0:4:6.02:626,6,0	1/1:18,3:26:69.10:5841,69,0	1/1:29,5:38:99:10330,102,0	1/1:6,0:6:9.03:782,9,0	1/1:23,4:28:81.28:8638,81,0	1/1:22,3:26:75.26:7821,75,0	1/1:17,0:17:33.10:2400,33,0	1/1:21,2:28:66.23:5738,66,0	1/1:21,5:31:90.28:9188,90,0	1/1:41,4:45:99:13121,129,0	1/1:5,1:6:18.06:1256,18,0
chr10	26192722	.	TA	T	19291.06	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=7.447;DP=707;FS=0.727;HRun=3;HaplotypeScore=70.9267;InbreedingCoeff=0.9994;MQ=89.25;MQ0=0;MQRankSum=-5.633;QD=34.26;ReadPosRankSum=6.931;VQSLOD=4.6083;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,21:21:63.20:781,63,0	1/1:0,13:13:39.12:483,39,0	0/0:24,0:24:62.57:0,63,859	0/0:28,0:28:51.03:0,51,975	1/1:1,37:38:99:1227,99,0	1/1:0,27:27:69.22:855,69,0	1/1:0,23:23:63.20:781,63,0	0/0:35,0:35:99:0,99,1392	1/1:0,21:21:60.19:744,60,0	1/1:2,30:32:90.27:1103,90,0	1/1:1,20:21:57.18:706,57,0	1/1:1,16:17:45.14:558,45,0	1/1:0,26:26:78.25:967,78,0	1/1:2,20:22:57.18:707,57,0	0/0:36,0:36:99:0,105,1511	1/1:1,19:20:57.18:707,57,0	0/0:21,0:21:60.20:0,60,864	1/1:1,12:13:33.10:409,33,0	1/1:1,18:19:54.17:670,54,0	1/1:0,29:29:84.26:1041,84,0	1/1:0,32:32:84.26:1041,84,0	1/1:0,22:22:66.21:818,66,0	1/1:0,33:33:93.29:1153,93,0	1/1:0,18:18:51.16:632,51,0	1/1:1,37:38:99:1302,105,0	1/1:0,34:34:99:1228,99,0	1/1:0,33:33:87.27:1079,87,0	1/1:0,11:11:24.08:298,24,0
chr10	26194325	.	ATATATATATATATATATATATATATATATATATATATG	A	219.94	PASS	AC=2;AF=0.053;AN=38;BaseQRankSum=1.568;DP=80;FS=5.819;HRun=0;HaplotypeScore=62.2017;InbreedingCoeff=0.1347;MQ=64.41;MQ0=0;MQRankSum=-1.568;QD=12.94;ReadPosRankSum=1.650;VQSLOD=0.2742;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:3,0:3:9.02:0,9,210	./.	./.	0/0:4,0:3:2.37:0,2,8	0/0:4,0:4:8.99:0,9,75	0/0:2,0:2:3.47:0,3,26	0/0:3,0:3:9.02:0,9,149	0/0:5,0:4:12.02:0,12,233	0/0:1,0:1:3.01:0,3,74	0/0:2,0:2:6.01:0,6,58	./.	./.	./.	./.	1/1:0,17:17:3.01:294,3,0	./.	0/0:5,0:5:9:0,9,582	0/0:15,0:14:23.97:0,24,799	./.	0/0:4,0:4:8.99:0,9,75	0/0:1,0:1:2.99:0,3,24	./.	0/0:1,0:1:2.99:0,3,24	0/0:1,0:1:3.01:0,3,156	0/0:1,0:1:3:0,3,26	0/0:3,0:3:9:0,9,81	0/0:2,0:2:2.99:0,3,24	0/0:1,0:1:3.01:0,3,164
chr10	26194362	.	TGTAC	T	619.92	PASS	AC=22;AF=0.786;AN=28;BaseQRankSum=2.067;DP=79;FS=11.504;HRun=0;HaplotypeScore=15.9675;InbreedingCoeff=0.4650;MQ=79.68;MQ0=1;MQRankSum=-3.203;QD=12.91;ReadPosRankSum=0.207;VQSLOD=0.8880;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,0:2:6.02:85,6,0	./.	./.	0/0:8,0:6:14.94:0,15,165	./.	1/1:2,0:2:3:50,3,0	1/1:1,0:1:3.01:50,3,0	0/0:11,0:10:30.10:0,30,509	./.	1/1:1,0:1:3.01:52,3,0	./.	./.	1/1:2,0:2:6.02:99,6,0	./.	1/1:17,0:17:2.92:17,3,0	./.	0/0:4,0:4:6.02:0,6,84	1/1:0,15:15:3.01:36,3,0	1/1:1,0:1:3.01:44,3,0	1/1:2,0:2:6.02:79,6,0	./.	./.	./.	./.	1/1:1,0:1:3.01:38,3,0	./.	./.	1/1:4,0:4:12.04:182,12,0
chr10	26194655	.	A	AC	96.14	PASS	AC=4;AF=0.67;AN=6;BaseQRankSum=0.731;DP=13;FS=6.990;HRun=0;HaplotypeScore=14.1131;MQ=100.78;MQ0=5;MQRankSum=-0.731;QD=19.23;ReadPosRankSum=0.731;VQSLOD=4.5982;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:5,0:2:3.01:0,3,41	./.	./.	./.	./.	1/1:0,3:3:9.03:134,9,0	./.	./.	./.	./.	./.	./.	./.	./.	1/1:0,2:1:3.01:32,3,0	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.
chr10	26202574	.	TC	T	872.69	PASS	AB=0.708;AC=8;AF=0.143;AN=56;BaseQRankSum=4.344;DP=531;FS=189.164;HRun=1;HaplotypeScore=62.3385;InbreedingCoeff=-0.1910;MQ=53.20;MQ0=0;MQRankSum=-3.285;QD=5.52;ReadPosRankSum=-1.498;VQSLOD=-0.0341;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:12,6:18:35.78:0,36,425	0/0:8,4:12:7.12:0,7,275	0/0:24,0:20:60.16:0,60,923	0/0:21,0:19:50.38:0,50,749	0/0:17,11:28:44.06:0,44,488	0/1:9,15:24:83.09:83,0,271	0/0:13,0:13:17.36:0,17,203	0/0:43,0:43:99:0,129,1996	0/0:8,8:16:21.04:0,21,240	0/1:12,11:23:99:359,0,331	0/0:15,6:21:38.88:0,39,375	0/0:9,8:17:27:0,27,288	0/1:8,8:16:14.82:15,0,237	0/1:12,13:25:2.68:3,0,411	0/0:26,0:26:78.24:0,78,1200	0/0:14,4:18:37.12:0,37,369	0/0:17,0:17:51.17:0,51,813	0/0:7,1:8:17.95:0,18,236	0/1:9,5:14:99:139,0,302	0/0:15,8:23:2.85:0,3,420	0/0:3,5:8:6.02:0,6,82	0/0:12,7:19:0.10:0,0,363	0/0:3,10:13:8.95:0,9,94	0/0:9,3:12:18.45:0,18,164	0/0:10,6:16:29.82:0,30,337	0/1:12,6:18:99:179,0,388	0/1:17,14:31:99:203,0,538	0/1:6,1:7:20.86:21,0,213
chr10	26204597	.	C	CAACATACATAGCATACATAGCATGTCGCCA	94588.59	PASS	AB=0.588;AC=45;AF=0.804;AN=56;BaseQRankSum=9.905;DP=759;FS=32.194;HRun=0;HaplotypeScore=459.8589;InbreedingCoeff=0.8836;MQ=70.27;MQ0=0;MQRankSum=-14.850;QD=148.72;ReadPosRankSum=3.582;VQSLOD=3.6080;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,0:25:41.43:2942,41,0	1/1:4,0:14:29.99:2517,30,0	0/0:31,0:31:87.21:0,87,2870	0/0:22,0:22:57.11:0,57,2025	1/1:21,0:39:41.79:2567,42,0	1/1:28,1:47:51.17:4240,51,0	1/1:10,0:28:50.98:3847,51,0	0/0:27,0:27:78.26:0,78,3689	1/1:14,0:31:78.20:8304,78,0	1/1:21,0:36:99:7535,99,0	1/1:7,0:21:41.95:3803,42,0	1/1:8,0:28:65.97:6025,66,0	1/1:14,2:37:42.14:4437,42,0	1/1:8,0:20:47.66:4659,48,0	0/0:21,0:21:63.20:0,63,4084	1/1:6,2:22:24.08:3007,24,0	0/0:22,0:22:63.22:0,63,4054	1/1:3,0:11:18.03:1475,18,0	1/1:9,0:24:66.15:3909,66,0	1/1:24,0:38:83.98:6689,84,0	1/1:6,0:20:32.98:2574,33,0	1/1:8,0:15:26.96:2458,27,0	1/1:16,1:28:23.95:2426,24,0	1/1:10,1:23:24.08:1954,24,0	1/1:19,1:47:57.20:6253,57,0	1/1:14,0:30:78.25:7026,78,0	1/1:13,3:39:42.14:4922,42,0	0/1:3,2:10:50.01:1019,0,50
chr10	26208026	.	GCTTT	G	16703.10	PASS	AB=0.750;AC=46;AF=0.821;AN=56;BaseQRankSum=10.982;DP=436;FS=14.960;HRun=0;HaplotypeScore=73.3577;InbreedingCoeff=0.8076;MQ=67.17;MQ0=4;MQRankSum=-6.966;QD=45.64;ReadPosRankSum=4.386;VQSLOD=4.3866;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,16:16:36.12:750,36,0	1/1:2,7:7:15.01:248,15,0	0/0:8,0:8:21.07:0,21,525	0/1:12,0:10:1.52:2,0,393	1/1:1,32:31:84.13:1637,84,0	1/1:1,13:13:33.11:689,33,0	1/1:1,4:5:11.99:207,12,0	0/0:32,0:32:96.27:0,96,2355	1/1:0,17:17:33.11:676,33,0	1/1:1,18:19:57.13:1023,57,0	1/1:0,17:17:39.07:769,39,0	1/1:0,16:16:36.12:752,36,0	1/1:2,13:15:35.99:662,36,0	1/1:1,15:15:30.10:620,30,0	0/0:17,0:17:51.15:0,51,1356	1/1:1,14:15:36.12:738,36,0	0/0:13,0:13:33.11:0,33,925	0/1:0,4:5:7.63:106,0,8	1/1:0,15:14:42.07:723,42,0	1/1:0,18:18:48.03:900,48,0	1/1:0,13:13:24.08:500,24,0	1/1:0,10:10:29.93:533,30,0	1/1:0,20:20:42.14:876,42,0	1/1:0,5:5:12.04:251,12,0	1/1:3,25:28:72.14:1393,72,0	1/1:0,20:19:57.14:1025,57,0	1/1:0,23:23:63.22:1311,63,0	1/1:0,5:5:15.05:313,15,0
chr10	26208401	.	T	TTG	980.77	PASS	AC=26;AF=0.929;AN=28;BaseQRankSum=-1.214;DP=446;FS=13.010;HRun=0;HaplotypeScore=15.5450;InbreedingCoeff=0.0796;MQ=10.16;MQ0=339;MQRankSum=0.694;QD=4.52;ReadPosRankSum=1.041;VQSLOD=-0.1212;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	./.	1/1:9,3:2:2.97:20,3,0	./.	./.	1/1:7,3:2:6.02:121,6,0	./.	./.	1/1:8,2:1:3.01:61,3,0	1/1:6,1:1:3.01:61,3,0	1/1:2,3:1:3.01:61,3,0	0/0:6,1:1:3.01:0,3,46	1/1:2,3:2:6.02:121,6,0	1/1:29,6:3:3.01:60,3,0	1/1:24,2:1:3.01:61,3,0	1/1:15,2:2:3.01:61,3,0	./.	1/1:26,17:15:8.99:142,9,0	./.	./.	1/1:17,15:1:3.01:54,3,0	./.	1/1:8,1:2:3.01:61,3,0	1/1:3,3:3:9.03:182,9,0	./.
chr10	26211708	.	A	AG	140.29	PASS	AC=2;AF=1.00;AN=2;DP=25;FS=0.000;HRun=3;HaplotypeScore=22.8582;MQ=15.79;MQ0=15;QD=23.38;VQSLOD=2.5626;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	1/1:2,4:5:15.05:203,15,0	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.
chr10	26211809	.	T	TAAA	305.58	PASS	AC=2;AF=0.167;AN=12;BaseQRankSum=1.167;DP=125;FS=0.000;HRun=9;HaplotypeScore=62.0180;MQ=66.42;MQ0=22;MQRankSum=-3.949;QD=27.78;ReadPosRankSum=0.584;VQSLOD=1.6264;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:3,0:1:3.01:0,3,38	./.	0/0:26,0:2:6.01:0,6,64	0/0:31,0:14:14.02:0,14,180	./.	./.	./.	0/0:19,0:18:30.02:0,30,334	./.	./.	./.	./.	./.	./.	1/1:3,7:10:21.07:385,21,0	./.	0/0:14,0:10:27.05:0,27,341	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.
chr10	26211823	.	TA	T	42.41	PASS	AC=2;AF=0.167;AN=12;BaseQRankSum=1.306;DP=152;FS=3.503;HRun=14;HaplotypeScore=76.4399;MQ=80.05;MQ0=21;MQRankSum=-1.442;QD=3.53;ReadPosRankSum=0.898;VQSLOD=0.7583;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:3,0:1:0:0,0,0	./.	0/0:40,1:6:8.85:0,9,60	0/0:39,1:20:0.26:0,0,84	./.	./.	./.	0/0:21,0:17:0.32:0,0,114	./.	./.	./.	./.	./.	./.	1/1:8,4:11:21.14:117,21,0	./.	0/0:18,0:14:21.39:0,21,277	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.
chr10	26214838	.	G	GA	11832.52	PASS	AB=0.775;AC=52;AF=0.929;AN=56;BaseQRankSum=-7.551;DP=577;FS=0.000;HRun=10;HaplotypeScore=63.0853;InbreedingCoeff=0.4203;MQ=68.46;MQ0=1;MQRankSum=-0.808;QD=21.09;ReadPosRankSum=2.616;VQSLOD=5.7650;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:4,17:22:1.09:397,0,1	1/1:0,5:6:12.03:128,12,0	0/1:18,0:9:7.29:7,0,95	0/0:15,0:12:15.01:0,15,135	1/1:5,16:22:0.95:427,1,0	1/1:2,18:20:29.49:519,29,0	1/1:5,12:18:35.29:342,35,0	1/1:7,17:24:51.12:537,51,0	1/1:0,17:17:42.11:448,42,0	1/1:8,23:32:41.34:622,41,0	1/1:5,16:22:26.46:447,26,0	1/1:5,27:32:66.17:704,66,0	1/1:6,18:25:54:556,54,0	1/1:4,17:21:32.51:550,33,0	1/1:7,18:25:29.51:519,30,0	1/1:6,20:26:13.87:559,14,0	1/1:3,18:21:26.48:487,26,0	1/1:2,8:11:20.89:206,21,0	1/1:3,16:19:42.09:439,42,0	1/1:11,17:29:26.19:640,26,0	1/1:1,12:14:29.91:302,30,0	1/1:2,17:19:23.48:454,23,0	1/1:2,17:19:5.17:261,5,0	1/1:4,14:18:30.08:320,30,0	1/1:0,18:19:44.95:462,45,0	1/1:3,23:26:4.25:652,4,0	1/1:3,23:27:66:686,66,0	1/1:2,7:9:15.04:160,15,0
chr10	26216846	.	A	AT	931.61	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-3.448;DP=608;FS=5.066;HRun=5;HaplotypeScore=53.1865;InbreedingCoeff=0.9727;MQ=68.50;MQ0=0;MQRankSum=-1.545;QD=32.12;ReadPosRankSum=0.563;VQSLOD=4.2057;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:29:80.23:0,80,844	0/0:13,0:13:33.08:0,33,355	0/0:9,0:9:27.05:0,27,282	0/0:5,0:5:14.71:0,15,140	0/0:34,0:34:93.23:0,93,999	0/0:30,0:30:81.17:0,81,853	0/0:12,0:12:36.09:0,36,387	0/0:27,0:27:72.18:0,72,774	0/0:24,0:24:69.17:0,69,737	0/0:40,0:40:99:0,114,1212	0/0:22,0:22:60.13:0,60,636	0/0:22,0:22:66.15:0,66,701	0/0:25,0:25:66.11:0,66,683	0/0:30,0:30:84.20:0,84,894	1/1:1,28:29:78.25:1026,78,0	0/0:20,0:20:57.13:0,57,605	0/0:17,0:17:42.10:0,42,451	0/0:21,0:21:51.08:0,51,535	0/0:16,0:16:45.06:0,45,463	0/0:30,0:30:87.22:0,87,935	0/0:10,0:10:30.06:0,30,314	0/0:21,0:21:60.13:0,60,630	0/0:20,0:21:59.18:0,59,619	0/0:10,0:10:27.03:0,27,278	0/0:35,0:35:99:0,102,1081	0/0:21,0:21:63.15:0,63,670	0/0:28,0:26:84.21:0,84,902	0/0:7,0:7:18.05:0,18,193
chr10	26219366	.	GGTGT	G	1965.54	PASS	AB=0.839;AC=30;AF=0.577;AN=52;BaseQRankSum=-1.444;DP=433;FS=1.604;HRun=0;HaplotypeScore=83.2802;InbreedingCoeff=-0.2109;MQ=59.89;MQ0=32;MQRankSum=0.344;QD=5.76;ReadPosRankSum=-0.598;VQSLOD=2.0780;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:24,2:26:11.93:129,12,0	1/1:5,5:10:12.04:170,12,0	./.	./.	0/1:20,2:22:8.77:55,0,9	0/1:17,0:15:15.26:15,0,28	0/1:19,1:20:61.01:61,0,123	0/1:20,0:25:0.43:48,0,0	1/1:7,3:10:2.64:47,3,0	0/1:7,5:10:7.81:139,0,8	1/1:12,2:14:22.58:190,23,0	0/1:9,1:11:35.10:35,0,43	0/0:6,0:6:0.47:0,0,1	0/1:4,2:11:15.94:38,0,16	0/1:11,0:9:18.95:19,0,27	1/1:5,8:12:21.07:327,21,0	0/1:15,0:16:20.26:162,0,20	1/1:13,4:16:23.61:281,24,0	0/1:14,0:12:16.88:17,0,57	1/1:6,0:11:3:28,3,0	0/1:22,0:19:22.75:23,0,33	0/0:4,0:4:5.67:0,6,36	0/0:2,0:7:8.23:0,8,37	0/1:5,0:12:21.92:22,0,26	1/1:6,3:10:5.98:81,6,0	0/0:9,0:6:2.64:0,3,16	0/1:13,2:14:13.32:153,0,13	0/1:6,5:8:8.94:75,0,9
chr10	26219669	.	CA	C	1434.74	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.183;DP=483;FS=26.616;HRun=5;HaplotypeScore=45.0508;InbreedingCoeff=0.9947;MQ=88.78;MQ0=0;MQRankSum=-0.959;QD=29.28;ReadPosRankSum=-2.957;VQSLOD=1.0653;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:51.16:0,51,681	0/0:8,0:8:24.08:0,24,328	0/0:21,0:21:47.61:0,48,687	0/0:14,0:14:36.09:0,36,472	0/0:32,0:32:90.29:0,90,1213	0/0:17,0:17:48.16:0,48,657	0/0:9,0:9:24.08:0,24,328	1/1:3,30:33:90.24:1012,90,0	0/0:18,0:18:54.15:0,54,706	0/0:20,0:20:57.19:0,57,778	0/0:21,0:21:63.21:0,63,862	0/0:13,0:13:39.13:0,39,534	0/0:20,0:20:60.20:0,60,821	0/0:13,0:13:39.12:0,39,517	0/0:22,0:22:66.20:0,66,885	0/0:10,0:10:30.10:0,30,410	1/1:0,16:16:48.14:545,48,0	0/0:13,0:13:36.12:0,36,492	0/0:16,0:16:48.16:0,48,655	0/0:28,0:28:78.23:0,78,1036	0/0:21,0:21:60.20:0,60,821	0/0:13,0:13:39.13:0,39,534	0/0:16,0:16:45.15:0,45,615	0/0:14,0:14:39.13:0,39,534	0/0:15,0:15:42.10:0,42,552	0/0:24,0:24:69.23:0,69,944	0/0:9,0:9:27.09:0,27,369	0/0:8,0:8:21.07:0,21,287
chr10	26220216	.	TTA	T	5011.96	PASS	AB=0.952;AC=49;AF=0.875;AN=56;BaseQRankSum=2.709;DP=432;FS=14.585;HRun=0;HaplotypeScore=95.2039;InbreedingCoeff=0.3206;MQ=68.44;MQ0=0;MQRankSum=-3.472;QD=12.02;ReadPosRankSum=3.413;VQSLOD=3.3266;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:25,1:26:55.33:227,55,0	1/1:7,1:8:19.30:100,19,0	0/0:11,0:10:4.63:0,5,387	0/0:4,0:4:5.95:0,6,72	1/1:19,0:19:17.23:140,17,0	1/1:18,1:19:39.09:181,39,0	1/1:2,0:2:4.44:14,4,0	1/1:4,30:34:96.19:1196,96,0	1/1:11,1:12:27.87:123,28,0	1/1:18,0:18:40.74:154,41,0	1/1:14,0:14:2.21:100,2,0	1/1:16,1:17:29.95:152,30,0	1/1:14,0:14:28.14:113,28,0	1/1:21,2:23:6.87:155,7,0	1/1:19,0:19:33.12:101,33,0	1/1:13,1:14:28:118,28,0	1/1:0,28:28:72.24:1004,72,0	0/1:8,0:8:19.31:19,0,24	0/1:17,0:17:35.70:38,0,36	1/1:21,0:21:21.70:137,22,0	0/1:10,2:12:33.39:115,0,33	1/1:11,1:12:27.82:129,28,0	1/1:13,1:14:10.94:127,11,0	1/1:5,0:5:8.70:26,9,0	1/1:13,0:13:30.05:122,30,0	1/1:15,1:16:32:152,32,0	1/1:23,1:24:33.80:165,34,0	1/1:8,0:8:20.16:105,20,0
chr10	26220217	.	TA	T	12563.29	PASS	AB=0.533;AC=51;AF=0.911;AN=56;BaseQRankSum=-3.707;DP=431;FS=8.701;HRun=2;HaplotypeScore=61.2959;InbreedingCoeff=0.7309;MQ=69.50;MQ0=0;MQRankSum=-4.384;QD=30.35;ReadPosRankSum=1.870;VQSLOD=3.6867;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,23:25:69.15:840,69,0	1/1:3,5:8:24.02:260,24,0	0/0:12,0:11:29.41:0,29,329	0/0:5,0:5:8.94:0,9,81	1/1:4,14:18:51.06:603,51,0	1/1:3,16:19:51.05:604,51,0	1/1:0,2:2:6.02:78,6,0	1/1:32,0:34:97.03:622,97,0	1/1:1,11:12:36.03:442,36,0	1/1:1,17:18:54.14:665,54,0	1/1:3,11:14:39.02:452,39,0	1/1:4,12:16:48.10:561,48,0	1/1:5,9:14:39.03:452,39,0	1/1:6,17:23:59.38:733,59,0	1/1:0,19:19:45.15:581,45,0	1/1:2,11:13:36.10:438,36,0	1/1:28,0:28:70.19:413,70,0	0/1:1,7:8:6.97:174,0,7	1/1:7,10:17:36.09:443,36,0	1/1:2,18:20:57.16:704,57,0	1/1:6,6:12:20.33:291,20,0	1/1:2,10:12:36:424,36,0	1/1:5,10:15:35.37:456,35,0	1/1:0,5:5:12.04:154,12,0	1/1:3,11:14:42.10:500,42,0	1/1:4,12:16:48.12:568,48,0	1/1:2,22:24:65.49:858,65,0	1/1:2,6:8:23.89:248,24,0
chr10	26220277	.	C	CT	9338.54	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-4.254;DP=399;FS=18.467;HRun=8;HaplotypeScore=53.8018;InbreedingCoeff=0.9469;MQ=64.28;MQ0=0;MQRankSum=1.346;QD=29.46;ReadPosRankSum=2.447;VQSLOD=3.3377;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,16:19:54.15:613,54,0	1/1:2,7:10:24.07:276,24,0	0/0:4,0:4:5.99:0,6,53	0/0:7,0:6:17.98:0,18,158	1/1:1,19:20:51.15:589,51,0	1/1:2,13:16:41.96:464,42,0	1/1:0,4:4:12.04:139,12,0	0/0:25,0:25:69.03:0,69,631	1/1:2,5:7:20.99:224,21,0	1/1:5,11:16:39.12:450,39,0	1/1:3,19:22:63.10:695,63,0	1/1:2,13:15:39.05:433,39,0	1/1:1,9:10:27.08:310,27,0	1/1:5,13:18:42.05:459,42,0	0/0:24,0:24:57:0,57,517	1/1:1,7:8:24:260,24,0	0/0:22,0:22:50.98:0,51,460	1/1:1,8:9:24.07:277,24,0	1/1:7,12:20:44.95:490,45,0	1/1:0,20:20:59.94:627,60,0	1/1:1,4:5:9.03:104,9,0	1/1:2,7:9:24.07:273,24,0	1/1:1,17:18:48.14:554,48,0	1/1:0,7:7:21.06:242,21,0	1/1:2,15:17:48.08:537,48,0	1/1:2,15:17:48.12:535,48,0	1/1:3,18:21:51.14:579,51,0	1/1:1,8:9:18.05:208,18,0
chr10	26220324	.	CT	C	328.24	PASS	AB=0.879;AC=4;AF=0.074;AN=54;BaseQRankSum=-0.392;DP=420;FS=2.071;HRun=9;HaplotypeScore=62.9206;InbreedingCoeff=0.4682;MQ=61.43;MQ0=0;MQRankSum=2.892;QD=7.82;ReadPosRankSum=1.980;VQSLOD=1.5140;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:48.14:0,48,553	0/0:7,0:7:18.05:0,18,208	0/0:11,0:9:17.26:0,17,180	./.	0/0:31,0:31:87.23:0,87,983	0/0:9,0:9:27.08:0,27,312	0/0:5,0:5:15.04:0,15,173	0/0:30,0:30:69.15:0,69,764	0/0:10,0:10:27.08:0,27,311	0/0:13,0:13:30.09:0,30,345	0/0:28,0:28:78.18:0,78,876	0/1:6,1:7:6.39:6,0,187	0/0:7,0:7:21.06:0,21,242	0/0:11,0:11:33.08:0,33,370	1/1:4,16:20:45.02:412,45,0	0/0:10,0:10:27.08:0,27,312	0/0:24,0:24:57.11:0,57,644	0/1:13,2:15:19.34:19,0,291	0/0:14,0:13:21.06:0,21,241	0/0:28,0:29:79.27:0,79,866	0/0:5,0:5:15.04:0,15,173	0/0:9,0:9:27.08:0,27,310	0/0:25,1:26:44.74:0,45,758	0/0:6,0:6:18.05:0,18,203	0/0:17,0:17:45.13:0,45,519	0/0:16,0:17:47.97:0,48,533	0/0:23,0:23:57.17:0,57,657	0/0:11,0:11:21.03:0,21,220
chr10	26220405	.	TC	T	737.59	PASS	AC=4;AF=0.074;AN=54;BaseQRankSum=4.872;DP=337;FS=10.570;HRun=5;HaplotypeScore=30.1141;InbreedingCoeff=0.7552;MQ=44.54;MQ0=28;MQRankSum=-4.457;QD=22.35;ReadPosRankSum=-2.074;VQSLOD=1.2648;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:54.16:0,54,717	0/0:6,0:5:9.03:0,9,123	0/0:9,0:1:3.01:0,3,41	./.	0/0:22,0:18:42.08:0,42,533	0/0:9,0:7:18.06:0,18,246	0/0:7,0:6:12.04:0,12,164	1/1:5,14:17:39.11:442,39,0	0/0:4,0:4:12.04:0,12,164	0/0:10,0:8:18.05:0,18,233	0/0:14,0:13:36.12:0,36,487	0/0:6,0:6:14.91:0,15,201	0/0:10,0:8:12.04:0,12,164	0/0:11,0:7:15.05:0,15,205	0/0:17,0:14:33.11:0,33,451	0/0:15,0:12:21.07:0,21,287	1/1:1,13:14:6.53:406,7,0	0/0:12,0:12:30.10:0,30,410	0/0:7,0:5:12.04:0,12,164	0/0:14,0:14:39.12:0,39,517	0/0:15,0:13:18.02:0,18,225	0/0:11,0:10:24.08:0,24,326	0/0:21,0:17:42.14:0,42,567	0/0:7,0:7:15.05:0,15,205	0/0:12,0:11:30.10:0,30,408	0/0:10,0:9:27.09:0,27,369	0/0:21,0:18:54.18:0,54,735	0/0:6,0:6:15.05:0,15,205
chr10	26222320	.	T	TTG	2492.25	PASS	AB=0.799;AC=37;AF=0.685;AN=54;BaseQRankSum=-2.658;DP=609;FS=5.554;HRun=0;HaplotypeScore=105.0670;InbreedingCoeff=-0.0279;MQ=66.51;MQ0=15;MQRankSum=0.711;QD=4.98;ReadPosRankSum=1.340;VQSLOD=2.6578;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:18:5.68:0,6,28	1/1:8,0:8:3.01:44,3,0	./.	0/0:30,0:17:1.25:0,1,3	0/1:14,9:24:52.34:76,0,52	0/1:19,10:29:13.72:186,0,14	0/1:14,1:15:2.61:62,0,3	1/1:31,0:30:8.04:41,8,0	0/1:20,6:26:24.06:159,0,24	1/1:31,0:31:17.73:167,18,0	1/1:15,0:17:11.81:109,12,0	1/1:11,0:11:3.12:44,3,0	1/1:8,2:11:3.01:44,3,0	1/1:18,3:20:11.04:172,11,0	1/1:12,0:12:2.52:99,3,0	0/1:8,3:11:19.42:121,0,19	1/1:31,0:30:5.97:62,6,0	1/1:12,8:21:14.83:221,15,0	1/1:23,5:30:12.51:165,13,0	1/1:17,0:17:12.03:154,12,0	1/1:20,9:28:3.01:44,3,0	1/1:20,0:20:11.29:155,11,0	0/1:20,2:22:8.24:254,0,8	0/1:18,10:29:71.34:197,0,71	0/1:21,0:24:22.28:22,0,25	0/0:21,0:20:1.93:0,2,17	0/1:17,7:26:8.14:39,0,8	0/0:9,0:9:3.22:0,3,13
chr10	26222806	.	TG	T	18310.35	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=12.213;DP=653;FS=16.468;HRun=3;HaplotypeScore=121.1342;InbreedingCoeff=0.9995;MQ=78.99;MQ0=0;MQRankSum=-3.691;QD=33.91;ReadPosRankSum=4.919;VQSLOD=2.9835;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,29:29:81.21:986,81,0	1/1:0,13:13:36.11:446,36,0	0/0:14,0:13:29.79:0,30,424	0/0:15,0:16:38.90:0,39,520	1/1:1,32:33:93.16:1114,93,0	1/1:2,22:24:63.20:775,63,0	1/1:3,15:18:36.11:446,36,0	0/0:40,0:39:99:0,114,1627	1/1:0,20:20:60.19:743,60,0	1/1:0,30:31:90.26:1100,90,0	1/1:0,23:23:63.20:781,63,0	1/1:2,17:19:51.16:632,51,0	1/1:0,24:24:66.21:818,66,0	1/1:0,16:16:48.15:594,48,0	0/0:18,0:18:54.18:0,54,778	1/1:0,31:31:84.26:1035,84,0	0/0:25,0:25:69.22:0,69,971	1/1:0,22:22:60.19:743,60,0	1/1:0,21:21:63.20:781,63,0	1/1:0,33:33:96.30:1190,96,0	1/1:1,17:18:48.15:595,48,0	1/1:1,20:21:60.19:744,60,0	1/1:1,26:27:75.23:926,75,0	1/1:2,24:26:29.40:812,29,0	1/1:1,28:29:75.24:930,75,0	1/1:0,23:23:69.22:855,69,0	1/1:1,27:29:72.23:891,72,0	1/1:0,10:10:30.09:372,30,0
chr10	26225222	.	GAAC	G	4478.30	PASS	AB=1.000;AC=51;AF=0.944;AN=54;BaseQRankSum=-2.161;DP=484;FS=2.570;HRun=0;HaplotypeScore=84.2093;InbreedingCoeff=0.2072;MQ=57.35;MQ0=9;MQRankSum=1.722;QD=9.80;ReadPosRankSum=3.159;VQSLOD=4.1867;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:21:16.22:143,16,0	1/1:4,0:4:6.01:63,6,0	0/0:15,0:9:0.47:0,0,1	./.	1/1:20,0:19:23.95:193,24,0	1/1:21,0:20:26.97:228,27,0	1/1:17,0:17:11.99:102,12,0	1/1:26,0:23:11.95:92,12,0	1/1:24,0:23:33.02:304,33,0	1/1:15,0:15:17.96:152,18,0	1/1:18,0:18:20.96:170,21,0	1/1:12,0:12:9.01:83,9,0	1/1:20,0:20:35.19:297,35,0	1/1:17,0:17:20.99:191,21,0	1/1:9,15:24:15.05:197,15,0	1/1:17,0:17:26.99:232,27,0	0/1:20,0:20:61.82:108,0,62	1/1:16,0:16:11.81:80,12,0	1/1:16,0:15:15:133,15,0	1/1:14,0:14:26.81:212,27,0	1/1:18,1:19:23.90:188,24,0	1/1:18,0:18:15.01:136,15,0	1/1:14,0:14:20.97:171,21,0	1/1:26,0:26:32.63:270,33,0	1/1:19,0:19:20.98:178,21,0	1/1:9,0:9:23.92:196,24,0	1/1:27,0:27:35.93:302,36,0	1/1:3,0:3:6.01:58,6,0
chr10	26225263	.	ACAACAGCAG	A	11901.95	PASS	AB=1.000;AC=48;AF=0.857;AN=56;BaseQRankSum=-0.920;DP=478;FS=9.272;HRun=0;HaplotypeScore=144.9315;InbreedingCoeff=0.6789;MQ=46.67;MQ0=16;MQRankSum=2.527;QD=27.87;ReadPosRankSum=0.400;VQSLOD=4.0493;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:24:7.03:212,7,0	1/1:6,1:7:21.07:388,21,0	0/0:10,0:9:23.58:0,24,280	0/0:17,0:7:21.03:0,21,312	1/1:17,1:17:35.67:369,36,0	1/1:16,2:16:39.02:513,39,0	1/1:17,0:17:17.38:203,17,0	0/1:25,0:17:53.33:53,0,363	1/1:14,8:21:57.12:1157,57,0	1/1:11,1:10:26.99:354,27,0	1/1:13,0:13:26.21:350,26,0	1/1:10,2:12:33.11:610,33,0	1/1:14,6:20:56.33:1029,56,0	1/1:11,2:13:30.03:525,30,0	0/0:24,0:24:42.14:0,42,809	1/1:19,2:21:63.13:948,63,0	0/1:28,0:28:34.97:35,0,1146	1/1:12,0:12:20.71:180,21,0	1/1:13,0:10:24.03:266,24,0	1/1:13,0:13:32.51:289,33,0	1/1:17,0:15:34.90:358,35,0	1/1:7,3:9:21.04:420,21,0	1/1:10,0:9:20.80:170,21,0	1/1:32,0:32:71.89:949,72,0	1/1:19,1:19:48.90:641,49,0	1/1:14,0:13:38.92:362,39,0	1/1:25,4:29:81.03:1138,81,0	1/1:5,2:6:18.06:384,18,0
chr10	26225266	.	ACAGCAG	A	8091.52	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=5.198;DP=489;FS=0.000;HRun=0;HaplotypeScore=141.4603;InbreedingCoeff=0.8559;MQ=46.70;MQ0=17;MQRankSum=-1.616;QD=21.52;ReadPosRankSum=1.015;VQSLOD=4.4995;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:19,1:20:6.02:89,6,0	1/1:6,1:7:21.07:314,21,0	0/0:19,0:12:22.78:0,23,317	0/0:17,0:8:24:0,24,333	1/1:17,0:16:12.04:177,12,0	1/1:15,2:15:21.07:310,21,0	1/1:16,0:16:6.02:102,6,0	0/0:24,0:16:30.10:0,30,458	1/1:22,2:23:54.15:864,54,0	1/1:13,2:13:18:239,18,0	1/1:13,0:13:15.05:215,15,0	1/1:11,1:12:36.12:542,36,0	1/1:18,3:21:45.15:717,45,0	1/1:12,1:13:18.06:316,18,0	0/0:24,0:24:42.14:0,42,666	1/1:18,4:22:47.62:730,48,0	0/0:29,0:29:60.13:0,60,1124	1/1:11,0:11:5.99:83,6,0	1/1:12,0:11:14.52:172,15,0	1/1:16,0:16:12.03:163,12,0	1/1:16,0:14:12.04:173,12,0	1/1:8,1:8:15.05:252,15,0	1/1:11,0:10:3.01:40,3,0	1/1:30,1:31:51.02:652,51,0	1/1:17,4:20:33.93:500,34,0	1/1:11,2:12:15:166,15,0	1/1:24,6:30:63.14:888,63,0	1/1:6,3:8:24.08:386,24,0
chr10	26225304	.	A	AAAC	21048.13	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-3.872;DP=605;FS=22.512;HRun=0;HaplotypeScore=133.2593;InbreedingCoeff=0.9900;MQ=65.16;MQ0=0;MQRankSum=-7.529;QD=45.86;ReadPosRankSum=2.396;VQSLOD=4.3182;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,22:22:57.11:1138,57,0	1/1:2,10:12:30.10:629,30,0	0/0:35,0:32:74.69:0,75,1039	0/0:26,0:24:44.74:0,45,638	1/1:9,22:31:51.65:1071,52,0	1/1:5,15:20:42.14:871,42,0	1/1:3,15:18:36.12:736,36,0	0/0:21,0:21:45.15:0,45,678	1/1:9,16:26:54.18:1100,54,0	1/1:5,18:23:60.10:1193,60,0	1/1:4,13:18:39.13:810,39,0	1/1:4,12:16:36.12:755,36,0	1/1:7,18:25:57.13:1125,57,0	1/1:1,18:20:54.19:1119,54,0	0/0:26,0:26:60.20:0,60,904	1/1:2,20:23:57.20:1173,57,0	0/0:38,0:38:99:0,100,1471	1/1:5,9:14:11.37:456,11,0	1/1:3,9:14:33.10:628,33,0	1/1:3,13:16:36.12:730,36,0	1/1:10,13:23:33.03:621,33,0	1/1:6,13:19:47.75:886,48,0	1/1:2,12:14:24.08:498,24,0	1/1:3,23:26:51.23:1366,51,0	1/1:3,20:24:49.36:1234,49,0	1/1:1,15:16:42.14:863,42,0	1/1:3,24:30:78.27:1602,78,0	1/1:2,7:9:21.07:441,21,0
chr10	26225408	.	C	CA	12676.77	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-5.189;DP=646;FS=5.387;HRun=7;HaplotypeScore=121.7054;InbreedingCoeff=0.9245;MQ=69.74;MQ0=6;MQRankSum=-1.105;QD=28.42;ReadPosRankSum=3.878;VQSLOD=3.7949;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,14:17:21.63:350,22,0	1/1:2,5:7:21.02:227,21,0	0/0:48,1:31:7.17:0,7,339	0/0:59,1:24:1.82:0,2,75	1/1:6,21:27:60.18:719,60,0	1/1:2,20:22:60.18:707,60,0	1/1:2,11:13:27.08:326,27,0	0/0:20,0:20:46.89:0,47,408	1/1:2,16:18:48.14:553,48,0	1/1:2,29:31:87.23:1020,87,0	1/1:6,15:21:57.10:651,57,0	1/1:5,8:13:27.07:309,27,0	1/1:2,17:19:54.11:618,54,0	1/1:6,17:23:57.17:671,57,0	0/0:23,0:23:60.04:0,60,550	1/1:4,13:17:45.12:530,45,0	0/0:37,0:37:87.83:0,88,859	1/1:3,7:10:27.04:310,27,0	1/1:10,6:17:32.88:333,33,0	1/1:6,21:27:66.15:759,66,0	1/1:2,6:8:17.97:193,18,0	1/1:10,14:24:63.13:717,63,0	1/1:7,12:19:45.08:508,45,0	1/1:6,10:16:37.70:421,38,0	1/1:5,20:25:69.20:815,69,0	1/1:8,14:22:48.11:548,48,0	1/1:4,28:31:78.23:921,78,0	1/1:0,17:17:39.12:471,39,0
chr10	26225466	.	CAAACT	C	18565.58	PASS	AB=1.000;AC=46;AF=0.821;AN=56;BaseQRankSum=-3.957;DP=632;FS=14.401;HRun=0;HaplotypeScore=179.3540;InbreedingCoeff=0.6802;MQ=63.82;MQ0=7;MQRankSum=-5.452;QD=43.99;ReadPosRankSum=2.026;VQSLOD=4.2650;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,2:16:27.30:378,27,0	1/1:0,7:7:15:286,15,0	0/0:55,0:32:38.04:0,38,1089	0/0:89,0:52:80.03:0,80,1851	1/1:8,16:25:64.97:1133,65,0	1/1:3,7:17:51.07:971,51,0	1/1:5,6:12:32.79:550,33,0	0/1:22,0:22:99:118,0,219	1/1:1,21:27:60.15:1309,60,0	1/1:4,9:16:47.91:881,48,0	1/1:3,23:28:77.33:1148,77,0	1/1:1,11:13:33.07:702,33,0	1/1:0,12:16:39.13:815,39,0	1/1:4,10:18:54.06:1015,54,0	0/0:25,0:25:1.45:0,1,714	1/1:1,16:18:37.46:848,37,0	0/0:37,0:37:9.22:0,9,1218	0/1:4,0:4:9.19:54,0,9	1/1:0,25:26:77.04:1109,77,0	1/1:3,8:14:42.05:796,42,0	1/1:0,11:15:12.04:216,12,0	1/1:6,14:22:62.46:1067,62,0	1/1:7,9:19:56.78:888,57,0	1/1:8,2:17:28.67:654,29,0	1/1:5,8:18:54.01:880,54,0	1/1:0,18:22:65.64:1157,66,0	1/1:4,12:22:66.14:1335,66,0	1/1:7,1:8:23.78:256,24,0
chr10	26225477	.	GAAACAAAACA	G	1206.85	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=4.789;DP=582;FS=2.078;HRun=0;HaplotypeScore=282.2653;InbreedingCoeff=0.6536;MQ=60.67;MQ0=4;MQRankSum=-4.688;QD=35.50;ReadPosRankSum=2.292;VQSLOD=3.2460;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:36.10:0,36,1140	0/0:7,0:7:18.06:0,18,456	0/0:36,0:27:5.04:0,5,685	0/0:68,0:39:49.91:0,50,887	0/0:26,0:26:60.21:0,60,1882	0/0:15,0:15:30.10:0,30,871	0/0:13,0:13:36.12:0,36,1174	0/0:21,0:21:48.16:0,48,1378	0/0:28,0:28:57.14:0,57,1385	0/0:14,0:14:35.14:0,35,900	0/0:27,0:27:63.22:0,63,1966	0/0:14,0:14:33.10:0,33,853	0/1:14,0:14:1.67:2,0,566	0/0:17,0:17:45.12:0,45,1215	0/0:23,0:23:60.19:0,60,2085	0/0:16,0:16:36.12:0,36,859	0/0:33,0:33:90.22:0,90,3451	0/0:5,0:5:12.01:0,12,408	0/0:25,0:25:60.21:0,60,1939	0/0:19,0:19:45.14:0,45,1281	0/0:16,0:16:12.03:0,12,320	1/1:5,15:20:45.15:1301,45,0	0/0:18,0:18:49.98:0,50,1569	0/0:20,0:20:52.02:0,52,1657	0/0:15,0:15:25.33:0,25,944	0/0:23,0:23:66.22:0,66,1995	0/0:22,0:22:54.17:0,54,1564	0/0:8,0:8:24.08:0,24,985
chr10	26226349	.	A	AT	7392.50	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-9.078;DP=299;FS=32.419;HRun=0;HaplotypeScore=32.1832;InbreedingCoeff=0.8022;MQ=57.83;MQ0=5;MQRankSum=1.274;QD=33.60;ReadPosRankSum=4.385;VQSLOD=2.8142;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,22:24:21.52:676,22,0	1/1:0,2:2:6.02:86,6,0	0/0:14,0:3:5.78:0,6,57	0/0:11,0:3:3.01:0,3,31	1/1:0,14:14:36.05:477,36,0	1/1:0,11:10:18.06:246,18,0	1/1:1,4:4:9.03:119,9,0	0/0:25,0:25:69.08:0,69,848	1/1:0,6:6:18.06:240,18,0	1/1:0,14:14:42.11:529,42,0	1/1:0,7:7:18.06:257,18,0	1/1:0,11:11:27.09:360,27,0	1/1:0,7:7:21.07:299,21,0	1/1:0,11:11:27.09:377,27,0	0/0:9,0:9:27.09:0,27,374	1/1:2,10:12:26.87:356,27,0	0/0:20,0:20:53.83:0,54,684	1/1:1,10:11:33.02:419,33,0	1/1:1,15:16:45.12:596,45,0	1/1:1,11:12:30.02:370,30,0	1/1:0,1:1:3.01:43,3,0	1/1:0,5:5:15.05:205,15,0	1/1:0,5:5:3:34,3,0	1/1:1,9:10:25.64:346,26,0	1/1:1,7:8:17.48:277,17,0	1/1:0,12:12:36.12:506,36,0	1/1:1,10:11:30.10:419,30,0	1/1:0,4:4:12.04:154,12,0
chr10	26226371	.	CA	C	1241.87	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-4.129;DP=345;FS=22.517;HRun=8;HaplotypeScore=58.4624;InbreedingCoeff=0.8884;MQ=61.05;MQ0=2;MQRankSum=-0.937;QD=21.05;ReadPosRankSum=-0.818;VQSLOD=1.9883;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:57.01:0,57,662	0/0:3,0:3:9.03:0,9,109	0/0:21,0:10:17.50:0,17,253	0/0:11,0:4:5.93:0,6,54	0/0:17,1:18:45.14:0,45,543	0/0:7,0:7:21.06:0,21,254	0/0:4,0:4:12.04:0,12,142	1/1:4,21:25:57.08:550,57,0	0/0:9,0:9:27.07:0,27,315	0/0:18,0:18:51.16:0,51,614	0/0:7,0:7:21.06:0,21,253	0/0:12,0:12:33.10:0,33,398	0/0:6,0:6:18.03:0,18,203	0/0:12,0:12:21.06:0,21,254	1/1:0,13:13:35.96:348,36,0	0/0:13,0:13:39.12:0,39,470	1/1:1,20:21:51.06:487,51,0	0/0:14,0:14:36.10:0,36,425	0/0:28,0:28:78.22:0,78,925	0/0:12,0:12:33.09:0,33,389	0/0:3,0:3:9.03:0,9,109	0/0:6,0:6:18.06:0,18,217	0/0:6,0:6:15.04:0,15,171	0/0:13,0:13:30.09:0,30,356	0/0:9,0:9:24.07:0,24,285	0/0:11,0:11:33.10:0,33,398	0/0:13,0:13:39.12:0,39,471	0/0:4,0:4:12.04:0,12,145
chr10	26226633	.	ATTAT	A	1772.85	PASS	AB=0.960;AC=28;AF=0.500;AN=56;BaseQRankSum=6.945;DP=404;FS=4.783;HRun=0;HaplotypeScore=140.9043;InbreedingCoeff=-0.2176;MQ=71.00;MQ0=0;MQRankSum=5.961;QD=5.56;ReadPosRankSum=3.337;VQSLOD=2.2430;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:11,0:11:9.76:10,0,32	0/1:4,0:4:0.44:67,0,0	0/0:11,0:11:31.14:0,31,645	0/0:12,0:12:36.12:0,36,841	1/1:23,0:27:4.70:268,5,0	0/1:13,1:14:8.81:88,0,9	0/1:9,0:9:29.13:29,0,32	0/0:32,0:32:96.33:0,96,2494	1/1:11,0:11:10.82:123,11,0	0/1:22,0:21:16.81:109,0,17	1/1:13,0:14:3.59:99,4,0	0/1:15,0:14:71.34:71,0,74	0/1:9,2:12:30.35:131,0,30	0/1:15,0:14:0.57:1,0,60	0/0:17,0:17:51.18:0,51,1307	0/1:10,0:9:11.32:24,0,11	0/0:13,0:13:39.13:0,39,1035	1/1:12,0:12:7.42:88,7,0	0/1:13,2:15:20.07:104,0,20	0/1:11,1:12:26.96:63,0,27	1/1:8,1:9:15.35:99,15,0	0/1:6,0:7:15.97:20,0,16	0/1:11,0:10:34.04:34,0,72	0/1:6,0:6:13.08:13,0,19	0/1:20,1:21:20.62:133,0,21	0/1:19,0:20:3.72:167,0,4	0/1:29,0:29:30.15:186,0,30	0/1:12,0:12:11.54:12,0,13
chr10	26226761	.	T	TA	10956.90	PASS	AB=0.526;AC=45;AF=0.804;AN=56;BaseQRankSum=-4.689;DP=451;FS=2.558;HRun=8;HaplotypeScore=54.3520;InbreedingCoeff=0.8573;MQ=58.94;MQ0=1;MQRankSum=0.250;QD=27.95;ReadPosRankSum=2.566;VQSLOD=5.4644;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,22:27:54.16:619,54,0	1/1:0,3:3:9.03:104,9,0	0/0:7,0:3:9:0,9,80	0/0:3,0:2:6:0,6,55	1/1:2,24:26:69.12:767,69,0	1/1:0,15:15:42.09:471,42,0	1/1:3,3:6:11.90:119,12,0	0/0:15,0:15:42.02:0,42,382	1/1:0,10:10:27.08:312,27,0	1/1:2,15:17:42.10:472,42,0	1/1:1,32:33:87.26:1004,87,0	1/1:1,12:13:33.10:380,33,0	1/1:2,15:16:39.12:450,39,0	1/1:2,18:20:45.13:519,45,0	0/0:12,0:12:36.02:0,36,330	1/1:4,16:20:20.67:492,21,0	0/0:22,0:22:55.10:0,55,477	0/1:1,9:10:0.37:250,0,0	1/1:4,11:15:33.05:357,33,0	1/1:5,31:36:90.19:1010,90,0	1/1:0,3:3:6.02:69,6,0	1/1:1,12:13:36.11:415,36,0	1/1:2,21:23:32.71:630,33,0	1/1:0,7:8:21.06:242,21,0	1/1:3,17:19:51.15:589,51,0	1/1:0,15:15:45.12:509,45,0	1/1:3,23:26:66.20:761,66,0	1/1:1,15:16:36.11:415,36,0
chr10	26229749	.	TA	T	9291.52	PASS	AB=0.887;AC=48;AF=0.857;AN=56;BaseQRankSum=7.761;DP=505;FS=1.081;HRun=10;HaplotypeScore=52.9608;InbreedingCoeff=0.6395;MQ=72.34;MQ0=2;MQRankSum=-0.904;QD=21.12;ReadPosRankSum=4.549;VQSLOD=5.5009;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,14:16:38.99:338,39,0	1/1:0,8:8:24:208,24,0	0/1:9,1:10:38.91:55,0,39	0/1:8,2:10:38.95:39,0,57	1/1:3,43:46:99:1094,126,0	1/1:1,19:20:50.99:443,51,0	1/1:0,12:12:35.99:313,36,0	0/0:31,3:34:3.12:0,3,692	1/1:2,13:15:35.99:313,36,0	1/1:1,16:17:47.99:417,48,0	1/1:1,15:16:38.98:339,39,0	1/1:3,16:19:41.98:365,42,0	1/1:4,9:13:23.99:208,24,0	1/1:0,17:17:47.99:417,48,0	0/0:15,1:16:19.05:0,19,430	1/1:3,13:16:38.99:339,39,0	0/0:15,0:15:39.11:0,39,431	1/1:2,6:8:17.99:156,18,0	1/1:4,21:26:64.99:547,65,0	1/1:1,23:24:68.98:599,69,0	1/1:0,7:7:15:130,15,0	1/1:4,16:20:44.99:391,45,0	1/1:4,20:24:29.80:488,30,0	1/1:1,11:12:29.99:260,30,0	1/1:0,16:17:41.03:344,41,0	1/1:2,27:29:80.98:703,81,0	1/1:2,22:25:65.02:553,65,0	1/1:1,9:10:26.99:234,27,0
chr10	26229998	.	CA	C	1694.75	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-8.026;DP=568;FS=0.552;HRun=2;HaplotypeScore=93.8783;InbreedingCoeff=0.9949;MQ=77.04;MQ0=0;MQRankSum=0.305;QD=33.89;ReadPosRankSum=-1.300;VQSLOD=3.1320;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:78.22:0,78,1144	0/0:10,0:10:30.10:0,30,450	0/0:6,0:6:18.06:0,18,270	0/0:17,0:17:34.13:0,34,492	0/0:28,0:28:84.28:0,84,1259	0/0:29,0:29:87.29:0,87,1304	0/0:20,0:20:60.20:0,60,899	1/1:0,30:30:87.27:1115,87,0	0/0:27,0:27:81.27:0,81,1214	0/0:15,0:15:45.15:0,45,652	0/0:20,0:20:57.17:0,57,832	0/0:25,0:25:75.25:0,75,1106	0/0:20,0:20:60.20:0,60,898	0/0:21,0:21:57.19:0,57,854	0/0:22,0:22:63.21:0,63,944	0/0:18,0:18:54.17:0,54,792	1/1:0,20:20:54.18:701,54,0	0/0:10,0:10:30.07:0,30,421	0/0:13,0:13:39.13:0,39,585	0/0:24,0:24:72.24:0,72,1078	0/0:21,0:21:60.20:0,60,899	0/0:15,0:15:42.14:0,42,630	0/0:18,0:18:48.16:0,48,719	0/0:17,0:17:51.16:0,51,745	0/0:17,0:17:51.17:0,51,764	0/0:28,0:28:84.28:0,84,1259	0/0:40,0:40:99:0,120,1776	0/0:10,0:10:30.10:0,30,450
chr10	26230453	.	TAATACA	T	30711.31	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=15.051;DP=665;FS=1.969;HRun=0;HaplotypeScore=176.1626;InbreedingCoeff=0.9572;MQ=80.04;MQ0=0;MQRankSum=-17.712;QD=60.22;ReadPosRankSum=4.353;VQSLOD=5.2245;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,34:34:81.28:1936,81,0	1/1:0,16:16:42.36:976,42,0	0/0:38,0:38:99:0,108,3386	0/0:34,0:34:96.05:0,96,3199	1/1:0,35:35:78.05:1436,78,0	1/1:0,32:32:90.31:2204,90,0	1/1:0,19:19:45.11:973,45,0	0/0:30,0:30:90.30:0,90,3109	1/1:1,27:28:72.25:1838,72,0	1/1:0,16:16:45.14:1101,45,0	1/1:0,27:27:66.18:1471,66,0	1/1:0,26:26:63.22:1607,63,0	1/1:0,23:23:57.20:1457,57,0	1/1:0,26:26:69.24:1761,69,0	0/0:33,0:33:99:0,99,3590	1/1:0,25:25:63.22:1612,63,0	0/0:20,0:20:60.21:0,60,2241	1/1:0,2:2:6.02:154,6,0	1/1:0,9:9:27.09:691,27,0	1/1:0,28:28:78.26:1783,78,0	1/1:0,11:11:17.77:384,18,0	1/1:0,24:24:66.23:1649,66,0	1/1:0,25:25:60.16:1429,60,0	1/1:0,14:14:14.79:326,15,0	1/1:0,27:27:72.25:1842,72,0	1/1:0,21:21:63.18:1476,63,0	1/1:0,39:39:93.32:2376,93,0	1/1:0,3:3:9.03:230,9,0
chr10	26230709	.	TG	T	14349.14	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=10.573;DP=553;FS=9.204;HRun=4;HaplotypeScore=95.0254;InbreedingCoeff=0.9566;MQ=87.30;MQ0=0;MQRankSum=-4.754;QD=32.39;ReadPosRankSum=5.617;VQSLOD=4.5317;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,29:30:84.26:1008,84,0	1/1:0,13:13:33.10:396,33,0	0/0:22,0:22:66.21:0,66,882	0/0:17,0:17:41.84:0,42,508	1/1:1,31:32:78.24:935,78,0	1/1:1,37:38:99:1188,99,0	1/1:0,15:15:36.11:432,36,0	0/0:29,0:29:78.17:0,78,1064	1/1:2,18:20:54.17:648,54,0	1/1:0,22:22:66.19:780,66,0	1/1:0,20:20:60.18:720,60,0	1/1:1,17:18:48.15:576,48,0	1/1:1,18:19:54.17:648,54,0	1/1:2,20:22:57.17:684,57,0	0/0:17,0:17:48.16:0,48,671	1/1:0,11:11:30.09:360,30,0	0/0:25,0:25:72.24:0,72,1008	1/1:1,5:6:15.05:180,15,0	1/1:1,15:16:45.14:540,45,0	1/1:1,17:18:51.16:612,51,0	1/1:0,16:16:39.12:468,39,0	1/1:0,20:20:57.17:684,57,0	1/1:2,18:20:45.14:540,45,0	1/1:1,16:17:48.15:576,48,0	1/1:0,10:10:30.09:360,30,0	1/1:0,26:26:75.23:900,75,0	1/1:0,33:33:90.28:1080,90,0	1/1:0,1:1:3.01:36,3,0
chr10	26231019	.	G	GA	1674.85	PASS	AC=6;AF=0.111;AN=54;BaseQRankSum=-4.847;DP=336;FS=4.651;HRun=6;HaplotypeScore=44.7847;InbreedingCoeff=0.7566;MQ=69.26;MQ0=0;MQRankSum=-0.037;QD=27.01;ReadPosRankSum=-2.694;VQSLOD=2.8374;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:27.06:0,27,275	0/0:15,0:15:36.07:0,36,366	0/0:6,0:5:1.71:0,2,25	0/0:7,0:7:5.68:0,6,61	0/0:23,0:23:51.09:0,51,513	0/0:18,0:18:51.11:0,51,520	0/0:12,0:12:33.06:0,33,329	1/1:8,28:36:87.25:1054,87,0	0/0:3,0:3:9.02:0,9,91	0/0:14,0:14:42.10:0,42,429	0/0:18,0:18:45.10:0,45,459	0/0:7,0:7:18.03:0,18,177	0/0:9,0:9:24.05:0,24,244	0/0:11,0:11:27.06:0,27,275	1/1:2,3:5:6.02:75,6,0	0/0:7,0:7:18.04:0,18,184	1/1:1,20:21:54.17:678,54,0	./.	0/0:14,0:14:39.08:0,39,397	0/0:16,0:16:36.08:0,36,367	0/0:6,0:6:15.03:0,15,153	0/0:4,0:4:9.02:0,9,92	0/0:9,0:9:12.02:0,12,122	0/0:4,0:4:3:0,3,31	0/0:18,0:18:51.12:0,51,520	0/0:15,0:15:36.06:0,36,362	0/0:17,0:17:48.08:0,48,476	0/0:10,0:10:30.07:0,30,306
chr10	26231667	.	CTTTT	C	8838.21	PASS	AB=0.686;AC=37;AF=0.661;AN=56;BaseQRankSum=2.119;DP=592;FS=32.474;HRun=15;HaplotypeScore=128.9379;InbreedingCoeff=0.1567;MQ=55.87;MQ0=20;MQRankSum=-2.630;QD=18.57;ReadPosRankSum=6.001;VQSLOD=1.1483;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:11,17:26:34.91:397,0,35	1/1:4,11:15:20.67:268,21,0	0/1:12,0:6:0.25:0,0,70	0/0:7,0:5:5.92:0,6,39	0/1:10,17:27:99:360,0,146	0/1:5,7:13:40.70:131,0,41	0/1:10,12:23:99:236,0,106	0/0:18,0:33:82.68:0,83,637	1/1:3,14:17:42.08:541,42,0	1/1:5,15:19:41.96:568,42,0	1/1:0,18:19:34.15:503,34,0	1/1:2,15:18:36.05:471,36,0	1/1:4,23:28:58.38:772,58,0	1/1:0,13:13:27.09:360,27,0	0/0:13,0:33:56.02:0,56,410	0/1:8,7:14:8.15:181,0,8	0/0:16,0:35:61.11:0,61,488	0/1:8,3:9:52.27:121,0,52	1/1:8,13:18:34.19:376,34,0	0/1:13,18:31:22.99:556,0,23	0/1:11,4:15:99:164,0,108	1/1:2,12:14:16.87:278,17,0	1/1:5,12:17:21.71:292,22,0	0/1:10,25:34:85.84:669,0,86	1/1:3,17:19:29.20:476,29,0	1/1:6,16:22:26.87:483,27,0	1/1:8,19:27:16.98:531,17,0	0/1:7,5:10:99:102,0,115
chr10	26232660	.	A	AT	18900.58	PASS	AB=0.875;AC=53;AF=0.946;AN=56;BaseQRankSum=-4.118;DP=565;FS=0.000;HRun=4;HaplotypeScore=72.5098;InbreedingCoeff=0.6273;MQ=68.67;MQ0=0;MQRankSum=-5.404;QD=34.06;ReadPosRankSum=3.527;VQSLOD=5.3849;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,13:13:36.08:471,36,0	1/1:0,8:8:21.07:287,21,0	0/0:10,0:10:18.03:0,18,193	0/1:6,1:7:21.31:21,0,99	1/1:5,27:31:63.20:861,63,0	1/1:0,29:29:84.24:1128,84,0	1/1:1,17:18:48.12:635,48,0	1/1:7,25:32:75.23:1007,75,0	1/1:4,9:13:27.09:369,27,0	1/1:3,22:25:66.22:901,66,0	1/1:2,20:22:60.16:800,60,0	1/1:2,11:13:30.10:410,30,0	1/1:5,21:26:63.17:841,63,0	1/1:2,17:19:51.17:697,51,0	1/1:2,19:21:54.18:739,54,0	1/1:0,19:19:54.07:677,54,0	1/1:1,11:12:33.08:431,33,0	1/1:0,15:15:42.14:574,42,0	1/1:4,14:18:42.13:559,42,0	1/1:4,34:38:93.18:1209,93,0	1/1:2,19:21:51.17:698,51,0	1/1:1,24:25:69.23:944,69,0	1/1:0,26:26:69.23:944,69,0	1/1:1,12:13:36.12:492,36,0	1/1:1,34:35:93.31:1272,93,0	1/1:2,15:17:45.14:600,45,0	1/1:2,31:33:87.25:1170,87,0	1/1:0,5:5:12.04:164,12,0
chr10	26233023	.	T	TTC	4552.59	PASS	AB=0.960;AC=29;AF=0.580;AN=50;BaseQRankSum=-5.328;DP=659;FS=6.542;HRun=0;HaplotypeScore=113.6639;InbreedingCoeff=-0.5659;MQ=76.77;MQ0=6;MQRankSum=2.435;QD=8.09;ReadPosRankSum=-0.849;VQSLOD=3.9795;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:30,2:32:0.37:349,0,0	0/1:7,0:7:24.87:37,0,25	./.	./.	0/1:18,1:20:37.50:232,0,38	0/1:22,0:25:10.87:128,0,11	1/1:21,0:21:11.83:98,12,0	1/1:47,0:47:9.46:83,9,0	0/1:29,0:29:32.35:278,0,32	0/1:22,2:24:51.81:198,0,52	0/1:10,1:11:20.69:105,0,21	0/1:14,2:16:97.80:253,0,98	0/1:24,1:25:27.07:316,0,27	0/1:18,0:20:41.56:199,0,42	0/0:16,0:28:25.57:0,26,126	0/1:28,0:28:8.79:191,0,9	1/1:17,0:17:24.21:180,24,0	1/1:8,0:9:12.04:141,12,0	0/1:18,0:17:17.71:112,0,18	0/1:24,0:26:32.31:82,0,32	0/1:17,1:18:50.59:80,0,51	0/1:25,2:27:2.64:320,0,3	0/1:22,1:22:17.69:142,0,18	0/1:23,0:22:21.13:161,0,21	0/1:30,0:30:19.78:218,0,20	0/1:21,2:26:36.11:270,0,36	0/1:37,1:39:90.10:381,0,90	./.
chr10	26233058	.	T	TCA	7979.50	PASS	AB=0.600;AC=36;AF=0.667;AN=54;BaseQRankSum=-7.691;DP=714;FS=4.220;HRun=0;HaplotypeScore=107.3976;InbreedingCoeff=-0.2365;MQ=63.77;MQ0=8;MQRankSum=0.294;QD=12.67;ReadPosRankSum=5.081;VQSLOD=3.9909;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,25:34:1.44:481,1,0	0/1:1,5:6:38.99:47,0,39	0/0:31,0:17:25.76:0,26,327	0/0:48,0:23:33.52:0,34,402	0/1:9,19:29:79.24:347,0,79	0/1:8,1:32:31.86:117,0,32	0/1:9,16:26:29.24:106,0,29	1/1:20,0:20:17.44:366,17,0	0/1:2,19:22:28.46:487,0,28	0/1:7,17:25:14.81:482,0,15	0/1:2,14:16:0.96:133,0,1	0/1:6,21:27:21.61:314,0,22	0/1:6,27:36:39.77:417,0,40	0/1:8,18:26:31.06:315,0,31	1/1:26,0:26:53.38:357,53,0	1/1:2,17:21:3.57:325,4,0	0/1:23,1:23:5.51:303,0,6	1/1:2,10:12:11.83:227,12,0	1/1:2,11:13:23.20:364,23,0	0/1:8,14:23:32.06:112,0,32	0/1:9,13:22:56.37:56,0,89	1/1:6,25:32:3.64:441,4,0	1/1:6,18:23:2.69:181,3,0	1/1:2,17:19:2.07:279,2,0	1/1:4,29:33:5.62:385,6,0	1/1:11,26:38:48.24:763,48,0	0/1:8,30:38:34.87:573,0,35	./.
chr10	26235187	.	AAT	A	1254.62	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-6.726;DP=465;FS=5.449;HRun=0;HaplotypeScore=81.2890;InbreedingCoeff=0.8906;MQ=66.70;MQ0=0;MQRankSum=0.036;QD=33.91;ReadPosRankSum=-4.248;VQSLOD=4.3961;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:36.10:0,36,633	0/0:9,0:9:27.08:0,27,468	0/0:6,0:6:15.03:0,15,197	0/0:3,0:3:3.01:0,3,52	0/0:35,0:35:99:0,105,1875	0/0:17,0:17:45.15:0,45,832	0/0:4,0:4:12.04:0,12,222	1/1:2,22:24:66.15:872,66,0	0/0:19,0:19:57.18:0,57,1011	0/0:19,0:19:57.19:0,57,1019	0/0:23,0:23:69.15:0,69,1216	0/0:21,0:21:63.22:0,63,1157	0/0:19,0:19:57.16:0,57,991	0/0:26,0:26:75.22:0,75,1295	0/0:17,0:17:51.16:0,51,911	0/0:22,0:22:66.20:0,66,1159	1/1:2,11:13:36.09:504,36,0	0/0:9,0:9:23.95:0,24,371	0/0:12,0:12:36.12:0,36,666	0/0:30,0:30:87.30:0,87,1608	0/0:6,0:6:18.06:0,18,333	0/0:10,0:10:30.09:0,30,524	0/0:15,0:15:45.13:0,45,764	0/0:10,0:10:30.09:0,30,522	0/0:20,0:20:60.19:0,60,1061	0/0:21,0:21:60.21:0,60,1109	0/0:33,0:33:96.31:0,96,1735	0/0:10,0:10:30.10:0,30,553
chr10	26239279	.	AG	A	20846.01	PASS	AB=1.000;AC=47;AF=0.839;AN=56;BaseQRankSum=11.884;DP=641;FS=8.668;HRun=1;HaplotypeScore=62.9760;InbreedingCoeff=0.8500;MQ=81.58;MQ0=0;MQRankSum=-3.460;QD=38.60;ReadPosRankSum=5.968;VQSLOD=4.7882;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,29:29:84.28:1175,84,0	1/1:0,11:11:33.11:462,33,0	0/0:16,1:17:1.26:0,1,532	0/1:15,0:15:2.12:2,0,460	1/1:0,25:25:66.22:923,66,0	1/1:0,42:42:99:1718,123,0	1/1:0,20:20:54.18:755,54,0	0/0:40,0:40:99:0,120,1885	1/1:0,22:22:63.21:881,63,0	1/1:0,33:33:99:1382,99,0	1/1:0,27:27:75.25:1049,75,0	1/1:0,18:18:54.18:754,54,0	1/1:0,37:37:99:1426,102,0	1/1:0,28:28:72.24:1007,72,0	0/0:30,0:30:90.31:0,90,1431	1/1:0,33:33:93.31:1301,93,0	0/0:14,0:14:42.14:0,42,671	1/1:0,5:5:15.05:210,15,0	1/1:0,17:17:51.13:690,51,0	1/1:0,28:28:81.27:1133,81,0	1/1:0,26:26:75.25:1049,75,0	1/1:0,27:27:78.26:1091,78,0	1/1:0,23:23:66.22:922,66,0	1/1:0,22:22:66.22:923,66,0	1/1:0,15:15:42.14:587,42,0	1/1:0,14:14:42.12:568,42,0	1/1:0,17:17:48.16:671,48,0	1/1:0,6:6:12.04:168,12,0
chr10	26239751	.	G	GATA	17867.05	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-10.935;DP=543;FS=1.060;HRun=0;HaplotypeScore=58.4286;InbreedingCoeff=0.8611;MQ=67.77;MQ0=0;MQRankSum=-2.462;QD=39.35;ReadPosRankSum=1.203;VQSLOD=5.1800;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,11:15:30.06:575,30,0	1/1:3,6:9:12.04:247,12,0	0/0:9,0:9:21.02:0,21,263	0/0:12,0:11:13.98:0,14,211	1/1:5,30:35:84.29:1662,84,0	1/1:4,18:22:48.16:987,48,0	1/1:2,4:6:9.03:184,9,0	0/0:29,0:29:54.13:0,54,730	1/1:6,10:16:27.02:511,27,0	1/1:4,28:32:81.21:1562,81,0	1/1:5,20:25:54.18:1059,54,0	1/1:5,15:21:36.12:725,36,0	1/1:2,16:18:33.11:678,33,0	1/1:4,15:19:36.12:733,36,0	0/0:19,0:19:51.16:0,51,723	1/1:4,15:19:33.11:678,33,0	0/0:20,0:20:45.15:0,45,654	1/1:1,13:14:27.09:554,27,0	1/1:3,8:11:3.17:438,3,0	1/1:8,25:35:78.19:1499,78,0	1/1:1,8:9:21.07:432,21,0	1/1:6,17:23:45.07:880,45,0	1/1:2,27:28:57.20:1159,57,0	1/1:1,4:5:6.02:123,6,0	1/1:5,25:30:57.20:1164,57,0	1/1:6,14:22:7.49:853,7,0	1/1:5,26:31:54.19:1103,54,0	1/1:4,3:7:3.01:62,3,0
chr10	26241016	.	CTA	C	15694.35	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=6.862;DP=466;FS=3.577;HRun=0;HaplotypeScore=60.5502;InbreedingCoeff=0.9958;MQ=78.57;MQ0=5;MQRankSum=-5.120;QD=40.45;ReadPosRankSum=5.618;VQSLOD=6.9053;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,11:12:26.88:369,27,0	1/1:0,7:7:21.07:322,21,0	0/0:11,0:11:30.10:0,30,562	0/0:12,0:12:20.50:0,20,542	1/1:0,20:20:60.20:919,60,0	1/1:1,23:24:66.22:1011,66,0	1/1:0,19:19:54.18:827,54,0	0/0:24,0:24:66.22:0,66,1205	1/1:0,12:12:27.09:413,27,0	1/1:1,19:19:54.15:772,54,0	1/1:0,18:17:51.17:781,51,0	1/1:0,19:18:48.16:735,48,0	1/1:0,25:25:66.22:1011,66,0	1/1:0,13:14:39.13:597,39,0	0/0:12,0:12:36.12:0,36,695	1/1:0,10:10:24.08:367,24,0	0/0:19,0:19:57.20:0,57,1090	1/1:0,17:16:42.14:643,42,0	1/1:1,13:14:39.13:597,39,0	1/1:0,28:28:69.23:1056,69,0	1/1:0,13:12:30.10:459,30,0	1/1:0,16:16:45.15:689,45,0	1/1:0,19:19:48.16:735,48,0	1/1:0,9:9:24.08:367,24,0	1/1:1,20:21:60.20:919,60,0	1/1:0,22:22:66.22:1003,66,0	1/1:0,21:21:48.16:735,48,0	1/1:0,8:8:24.08:367,24,0
chr10	26241438	.	TACACACACACACACACACACACAC	T	13060.80	PASS	AB=1.000;AC=39;AF=0.750;AN=52;BaseQRankSum=4.137;DP=385;FS=21.959;HRun=0;HaplotypeScore=221.0881;InbreedingCoeff=0.6327;MQ=62.93;MQ0=14;MQRankSum=-3.263;QD=46.15;ReadPosRankSum=1.742;VQSLOD=2.5581;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:12,2:13:7.26:301,7,0	./.	0/0:17,0:9:3.01:0,3,124	0/0:25,0:20:3.01:0,3,90	1/1:13,2:15:9.03:418,9,0	1/1:10,7:17:24.07:1341,24,0	./.	0/0:18,0:18:15.05:0,15,375	1/1:10,6:16:27.03:843,27,0	1/1:17,2:16:12.03:494,12,0	1/1:8,5:13:15.05:842,15,0	1/1:2,12:14:18.06:1028,18,0	1/1:3,16:18:18.06:1063,18,0	1/1:9,3:12:12.04:620,12,0	0/0:7,0:8:15.05:0,15,925	1/1:6,9:14:21.07:1270,21,0	0/0:12,0:14:3.60:0,4,437	0/0:5,0:5:3.89:0,4,34	1/1:6,1:6:3.01:188,3,0	1/1:12,4:16:15.05:745,15,0	1/1:13,0:12:6.01:110,6,0	1/1:6,4:10:9.03:564,9,0	1/1:5,2:7:6.02:179,6,0	1/1:15,11:25:9.03:390,9,0	1/1:17,5:19:15.04:940,15,0	1/1:3,3:6:12.04:653,12,0	1/1:11,5:17:18.06:1027,18,0	0/1:5,0:4:3.55:43,0,4
chr10	26241540	.	A	ATAT	1719.98	PASS	AB=0.587;AC=34;AF=0.607;AN=56;BaseQRankSum=1.813;DP=412;FS=6.130;HRun=0;HaplotypeScore=141.8516;InbreedingCoeff=-0.3746;MQ=70.48;MQ0=1;MQRankSum=-0.576;QD=4.41;ReadPosRankSum=8.386;VQSLOD=1.2153;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:1,0:9:13.32:43,13,0	1/1:0,0:2:4.44:14,4,0	0/0:12,0:10:2.93:0,3,232	0/0:10,0:8:20.85:0,21,248	0/1:6,0:24:37.33:66,0,37	0/1:6,0:24:40.89:62,0,41	0/1:2,0:4:4.04:4,0,70	0/1:7,1:37:99:526,0,275	0/1:4,0:15:38.34:38,0,63	0/1:1,0:8:21.55:31,0,22	1/1:3,0:25:43.76:195,44,0	0/1:4,0:9:19.04:19,0,79	0/1:9,0:18:34.87:35,0,53	1/1:4,1:15:2.81:62,3,0	0/1:3,0:15:49.48:49,0,50	1/1:4,0:12:17.76:58,18,0	0/1:2,0:13:40.88:130,0,41	0/1:2,0:11:34.03:34,0,36	0/1:5,0:19:67.54:68,0,172	0/1:6,0:19:75.78:76,0,81	0/1:2,0:13:39.20:39,0,54	1/1:0,0:2:2.22:7,2,0	0/1:9,0:16:2.10:2,0,256	1/1:3,0:8:8.88:29,9,0	0/1:5,0:15:34.28:34,0,36	0/1:5,0:22:99:129,0,101	0/1:5,0:24:77.57:78,0,85	1/1:0,0:10:15.54:51,16,0
chr10	26242379	.	G	GTTTTT	15752.80	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=12.974;DP=583;FS=8.473;HRun=5;HaplotypeScore=158.1680;InbreedingCoeff=0.9249;MQ=60.88;MQ0=2;MQRankSum=-13.389;QD=36.05;ReadPosRankSum=3.259;VQSLOD=1.2405;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:13,1:14:18.02:390,18,0	1/1:6,0:6:8.39:156,8,0	0/0:36,0:29:61.04:0,61,1204	0/0:21,0:18:51.17:0,51,886	1/1:25,1:27:44.48:992,44,0	1/1:20,0:21:35.45:724,35,0	1/1:16,1:17:18.53:474,19,0	0/0:41,0:41:93.24:0,93,1619	1/1:17,0:17:27.09:673,27,0	1/1:26,1:27:59.65:1348,60,0	1/1:30,0:30:30.05:643,30,0	1/1:15,0:15:29.89:675,30,0	1/1:29,1:31:58.70:1303,59,0	1/1:13,2:15:18.06:455,18,0	0/0:20,0:20:60.21:0,60,1118	1/1:18,1:19:29.84:697,30,0	0/0:28,0:28:81.20:0,81,1401	1/1:5,0:5:9.03:224,9,0	1/1:21,0:21:60.21:1368,60,0	1/1:23,2:26:30.10:697,30,0	1/1:11,0:11:9.03:203,9,0	1/1:18,0:18:18.06:451,18,0	1/1:23,0:23:27.09:633,27,0	1/1:9,0:9:15.04:337,15,0	1/1:25,0:25:33.07:756,33,0	1/1:24,0:24:62.49:1281,62,0	1/1:29,1:30:48.12:1125,48,0	1/1:5,0:5:6.02:148,6,0
chr10	26242382	.	T	TCTTTTTTG	21862.95	PASS	AB=0.551;AC=41;AF=0.732;AN=56;BaseQRankSum=6.553;DP=664;FS=12.369;HRun=0;HaplotypeScore=163.5859;InbreedingCoeff=0.4388;MQ=58.88;MQ0=2;MQRankSum=-13.473;QD=42.53;ReadPosRankSum=5.868;VQSLOD=3.5824;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,0:19:15.01:559,15,0	0/1:1,0:6:6.47:216,0,6	0/0:37,0:28:65.13:0,65,1767	0/0:24,0:21:60.19:0,60,1324	0/1:4,0:29:20.78:1369,0,21	1/1:6,0:29:20.63:1095,21,0	1/1:5,0:18:18.06:582,18,0	0/0:41,0:41:99:0,120,2666	1/1:2,0:22:1.35:873,1,0	1/1:1,0:35:67.49:1927,67,0	0/1:4,0:34:16.56:817,0,17	1/1:2,0:16:3.35:984,3,0	1/1:5,0:32:32.55:1876,33,0	1/1:3,1:18:1.11:541,1,0	0/0:21,0:21:63.21:0,63,1780	1/1:2,0:19:29.94:1024,30,0	0/0:27,0:27:81.28:0,81,2178	0/1:3,0:8:11.84:312,0,12	1/1:1,0:24:72.12:1610,72,0	1/1:4,0:30:15:1031,15,0	1/1:3,0:13:12:332,12,0	0/1:2,0:19:5.61:654,0,6	1/1:2,0:28:4.22:883,4,0	1/1:2,0:14:13.29:415,13,0	1/1:3,0:27:6.29:1101,6,0	1/1:4,0:28:48.54:1891,49,0	1/1:2,0:39:45.01:1547,45,0	1/1:0,0:6:6.02:225,6,0
chr10	26242923	.	CT	C	4848.72	PASS	AB=0.944;AC=47;AF=0.839;AN=56;BaseQRankSum=4.608;DP=384;FS=19.884;HRun=10;HaplotypeScore=103.9786;InbreedingCoeff=0.7527;MQ=74.52;MQ0=5;MQRankSum=-8.328;QD=17.38;ReadPosRankSum=3.126;VQSLOD=4.0069;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,10:16:26.82:215,27,0	1/1:0,9:9:26.99:234,27,0	0/0:52,0:18:2.35:0,2,173	0/0:29,0:15:27.58:0,28,205	1/1:3,15:18:41.99:364,42,0	1/1:3,10:13:32.99:286,33,0	1/1:0,5:5:3:26,3,0	0/0:12,0:12:27.05:0,27,282	1/1:3,9:12:29.97:255,30,0	1/1:4,8:12:23.87:192,24,0	1/1:7,12:17:32.27:256,32,0	1/1:1,7:6:11.91:95,12,0	1/1:1,11:11:26.99:234,27,0	1/1:3,9:12:26.98:234,27,0	0/0:12,0:12:33.06:0,33,365	1/1:2,13:15:35.99:312,36,0	0/1:16,1:16:3.63:4,0,407	1/1:4,3:7:10.81:83,11,0	1/1:7,8:15:23.98:208,24,0	1/1:1,11:12:29.99:260,30,0	1/1:0,3:3:6:52,6,0	1/1:0,7:7:20.87:161,21,0	1/1:1,7:8:17.87:146,18,0	1/1:1,3:4:9:78,9,0	1/1:3,19:22:53.98:469,54,0	1/1:3,11:13:29.97:260,30,0	1/1:2,13:15:41.98:361,42,0	1/1:3,1:4:8.92:65,9,0
chr10	26242938	.	CT	C	3853	PASS	AC=44;AF=0.815;AN=54;BaseQRankSum=8.447;DP=345;FS=52.306;HRun=9;HaplotypeScore=91.6676;InbreedingCoeff=0.7643;MQ=71.38;MQ0=12;MQRankSum=-7.604;QD=17.67;ReadPosRankSum=3.699;VQSLOD=0.4455;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,8:13:20.99:187,21,0	1/1:1,9:10:24.01:219,24,0	0/0:46,0:15:4.63:0,5,89	0/0:29,1:15:3.31:0,3,85	1/1:4,13:17:36.02:328,36,0	1/1:3,9:12:27:242,27,0	1/1:1,1:2:3:27,3,0	0/0:16,0:14:32.96:0,33,361	1/1:3,7:9:18.01:165,18,0	1/1:2,9:11:17.95:155,18,0	1/1:4,9:11:15:136,15,0	1/1:1,5:4:9:82,9,0	1/1:0,9:8:24.01:219,24,0	1/1:3,7:10:21.01:192,21,0	0/0:13,0:13:24.04:0,24,276	1/1:5,7:12:21:192,21,0	0/0:17,0:17:46.56:0,47,530	1/1:3,1:4:5.03:33,5,0	1/1:4,9:13:27.01:247,27,0	1/1:4,7:10:23.22:199,23,0	1/1:1,2:3:3:27,3,0	1/1:2,2:4:6:55,6,0	1/1:2,6:8:15.01:137,15,0	1/1:0,3:3:9:82,9,0	1/1:4,12:16:38.99:351,39,0	1/1:3,9:11:21.01:192,21,0	1/1:3,16:18:42.02:384,42,0	./.
chr10	26245498	.	C	CTTAG	26046.70	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-6.450;DP=526;FS=1.350;HRun=0;HaplotypeScore=93.7380;InbreedingCoeff=0.9927;MQ=77.34;MQ0=0;MQRankSum=-5.266;QD=61.87;ReadPosRankSum=3.260;VQSLOD=6.5318;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,19:24:57.15:1458,57,0	1/1:4,3:7:15.01:340,15,0	0/0:21,0:21:58.44:0,58,999	0/0:7,0:7:18.03:0,18,299	1/1:1,22:23:57.15:1459,57,0	1/1:2,23:25:69.24:1796,69,0	1/1:3,11:14:36.12:836,36,0	0/0:39,0:39:99:0,114,2091	1/1:3,13:18:42.10:1048,42,0	1/1:4,15:19:60.21:1558,60,0	1/1:6,11:18:39:747,39,0	1/1:8,8:16:36.07:791,36,0	1/1:2,19:22:57.20:1491,57,0	1/1:3,15:19:45.11:1117,45,0	0/0:22,0:22:57.20:0,57,1064	1/1:2,17:20:51.13:1300,51,0	0/0:16,0:16:48.16:0,48,896	1/1:1,8:9:24.08:601,24,0	1/1:5,7:14:39.08:924,39,0	1/1:3,20:24:63.21:1552,63,0	1/1:3,13:17:36.08:900,36,0	1/1:0,16:17:45.02:1019,45,0	1/1:2,11:13:36.04:797,36,0	1/1:3,10:13:21.07:560,21,0	1/1:4,14:18:42.14:1094,42,0	1/1:4,14:19:51.16:1282,51,0	1/1:5,34:41:99:2635,105,0	1/1:2,8:10:30.08:743,30,0
chr10	26245666	.	GT	G	13098.87	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=5.510;DP=577;FS=1.336;HRun=7;HaplotypeScore=75.9445;InbreedingCoeff=0.9433;MQ=83.08;MQ0=0;MQRankSum=-4.795;QD=27.93;ReadPosRankSum=6.256;VQSLOD=4.8320;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,11:11:33.08:337,33,0	1/1:0,9:9:24.05:245,24,0	0/0:16,0:16:45.14:0,45,546	0/0:22,0:22:51.11:0,51,587	1/1:1,22:23:66.15:673,66,0	1/1:1,29:30:87.20:887,87,0	1/1:2,8:10:24.05:245,24,0	0/0:29,0:29:75.23:0,75,934	1/1:2,16:18:48.11:489,48,0	1/1:1,25:26:69.11:688,69,0	1/1:0,25:25:75.17:765,75,0	1/1:2,18:20:48.11:490,48,0	1/1:2,28:30:84.19:857,84,0	1/1:1,14:15:42.06:417,42,0	0/0:30,0:30:87.25:0,87,1068	1/1:1,24:25:69.16:704,69,0	0/0:11,0:11:30.10:0,30,377	1/1:2,7:9:0.52:191,1,0	1/1:2,20:22:60.13:612,60,0	1/1:0,17:17:51.12:520,51,0	1/1:2,18:20:51.11:521,51,0	1/1:1,18:19:48.11:490,48,0	1/1:3,23:26:66.15:672,66,0	1/1:0,14:14:42.10:428,42,0	1/1:0,24:24:72.16:735,72,0	1/1:1,27:28:81.15:817,81,0	1/1:1,37:38:99:1071,105,0	1/1:2,8:10:24.05:245,24,0
chr10	26250013	.	GA	G	11986.36	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=3.706;DP=530;FS=5.931;HRun=8;HaplotypeScore=53.4266;InbreedingCoeff=0.8876;MQ=69.27;MQ0=0;MQRankSum=-1.376;QD=24.07;ReadPosRankSum=-0.459;VQSLOD=5.2787;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,15:16:33.05:319,33,0	1/1:1,6:7:18.03:173,18,0	0/0:8,0:8:12.17:0,12,140	0/0:4,0:4:9:0,9,82	1/1:2,25:27:68.80:665,69,0	1/1:1,24:25:63.10:608,63,0	1/1:1,4:5:12.02:116,12,0	1/1:3,20:23:60.07:572,60,0	1/1:1,16:17:48.08:464,48,0	1/1:5,27:32:81.12:782,81,0	1/1:2,25:27:72.11:695,72,0	1/1:1,16:17:45.07:435,45,0	1/1:4,16:20:39.05:377,39,0	1/1:2,14:16:36.05:348,36,0	0/0:20,0:20:60.18:0,60,725	1/1:1,22:23:54.09:522,54,0	1/1:2,21:23:51.08:493,51,0	1/1:2,11:13:30.05:290,30,0	1/1:1,10:11:21.82:279,22,0	1/1:5,31:36:84.12:811,84,0	1/1:2,11:13:27.04:261,27,0	1/1:1,19:20:54.08:521,54,0	1/1:4,29:33:84.13:810,84,0	1/1:1,13:14:2.82:311,3,0	1/1:1,16:17:48.08:464,48,0	1/1:1,27:28:81.11:775,81,0	1/1:2,28:30:78.12:753,78,0	1/1:0,5:5:15.02:145,15,0
chr10	26250900	.	TTTAC	T	10389.60	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=8.191;DP=382;FS=0.000;HRun=0;HaplotypeScore=63.4505;InbreedingCoeff=0.8093;MQ=73.60;MQ0=1;MQRankSum=-0.604;QD=33.95;ReadPosRankSum=3.520;VQSLOD=4.2936;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,15:15:33.11:574,33,0	1/1:0,4:4:6.02:108,6,0	0/0:9,0:9:14.94:0,15,120	0/0:8,0:8:15.02:0,15,299	1/1:1,18:19:44.90:605,45,0	1/1:2,15:17:36.12:647,36,0	1/1:5,0:5:9:105,9,0	0/0:35,0:35:93.22:0,93,2049	1/1:3,9:12:15.05:268,15,0	1/1:3,22:24:63.16:976,63,0	1/1:2,13:15:38.92:535,39,0	1/1:0,6:6:6.02:108,6,0	1/1:3,10:13:21.07:377,21,0	1/1:0,15:15:33.11:578,33,0	0/0:10,0:9:27.07:0,27,516	1/1:4,10:14:42.12:671,42,0	0/0:14,0:14:41.93:0,42,899	1/1:1,5:6:6.02:108,6,0	1/1:0,16:16:48.09:659,48,0	1/1:3,18:20:48.05:780,48,0	1/1:3,5:8:5.98:74,6,0	1/1:2,0:2:3:28,3,0	1/1:6,4:10:21.05:297,21,0	1/1:1,4:5:6.02:94,6,0	1/1:10,11:20:60.12:854,60,0	1/1:3,20:22:57.16:923,57,0	1/1:4,24:26:51.17:916,51,0	1/1:0,5:5:6.02:107,6,0
chr10	26250973	.	T	TACACACAC	10408.26	PASS	AC=44;AF=0.917;AN=48;BaseQRankSum=-2.482;DP=402;FS=1.004;HRun=0;HaplotypeScore=119.4242;InbreedingCoeff=0.7469;MQ=57.95;MQ0=3;MQRankSum=-3.498;QD=33.68;ReadPosRankSum=4.371;VQSLOD=4.6763;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	1/1:6,1:7:12.04:303,12,0	0/0:41,0:28:29.16:0,29,693	0/0:28,0:19:13.31:0,13,291	1/1:9,9:18:29.99:324,30,0	1/1:13,8:16:21.07:506,21,0	./.	1/1:22,0:26:42.47:447,42,0	1/1:4,3:6:11.97:321,12,0	1/1:11,7:16:38.97:1119,39,0	1/1:8,5:13:11.77:125,12,0	1/1:5,4:8:12.04:324,12,0	1/1:4,9:11:27.04:836,27,0	1/1:11,1:11:5.95:55,6,0	1/1:3,2:5:15.01:333,15,0	1/1:9,13:19:39.11:1371,39,0	1/1:8,0:16:14.15:233,14,0	1/1:3,3:5:8.99:271,9,0	1/1:9,4:10:20.85:559,21,0	1/1:17,7:22:31.56:507,32,0	./.	1/1:3,5:7:9.03:110,9,0	1/1:8,4:13:23.91:329,24,0	./.	1/1:7,6:12:24.07:742,24,0	1/1:15,4:17:35.08:809,35,0	1/1:14,4:15:20.90:765,21,0	1/1:3,0:3:2.96:19,3,0
chr10	26251048	.	CTA	C	7321.08	PASS	AC=50;AF=0.926;AN=54;BaseQRankSum=-0.405;DP=331;FS=4.103;HRun=0;HaplotypeScore=58.4307;InbreedingCoeff=0.6807;MQ=74.32;MQ0=5;MQRankSum=-5.843;QD=26.43;ReadPosRankSum=1.953;VQSLOD=5.6615;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,5:5:3.01:42,3,0	1/1:0,9:9:14.83:210,15,0	0/0:28,0:17:36.14:0,36,673	0/0:25,0:15:40.19:0,40,549	1/1:0,19:19:54.18:746,54,0	1/1:1,12:13:21.07:294,21,0	1/1:0,4:4:6.02:84,6,0	1/1:4,25:29:66.21:906,66,0	1/1:0,5:5:12.02:149,12,0	1/1:8,7:11:33.11:460,33,0	1/1:3,12:14:21.07:285,21,0	1/1:4,3:7:18.06:249,18,0	1/1:0,12:12:21.07:293,21,0	1/1:1,3:4:6.02:84,6,0	1/1:2,8:10:15.05:209,15,0	1/1:3,12:15:26.96:348,27,0	1/1:4,14:18:29.96:373,30,0	1/1:1,5:6:6.02:83,6,0	1/1:0,8:8:21.07:294,21,0	1/1:0,9:9:27.09:377,27,0	./.	1/1:0,3:3:6.02:84,6,0	1/1:0,8:8:9.03:126,9,0	1/1:1,9:9:9.03:126,9,0	1/1:0,12:12:21.07:291,21,0	1/1:2,10:11:21.07:294,21,0	1/1:11,8:18:54.18:748,54,0	1/1:1,8:8:12.04:168,12,0
chr10	26251575	.	G	GAC	4348.35	PASS	AB=0.987;AC=40;AF=0.714;AN=56;BaseQRankSum=0.587;DP=500;FS=27.424;HRun=0;HaplotypeScore=113.3881;InbreedingCoeff=0.4295;MQ=67.83;MQ0=15;MQRankSum=1.530;QD=11.41;ReadPosRankSum=5.540;VQSLOD=2.3916;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:14:17.69:136,18,0	1/1:2,0:2:2.94:18,3,0	0/0:26,0:14:21.29:0,21,227	0/0:32,0:18:37.98:0,38,391	1/1:21,0:21:41.92:344,42,0	1/1:12,0:12:32.96:274,33,0	1/1:31,0:29:50.33:518,50,0	0/0:18,0:18:47.77:0,48,343	1/1:14,0:14:4.04:65,4,0	1/1:26,0:24:9.01:414,9,0	1/1:14,0:14:20.79:185,21,0	0/1:13,0:12:18.99:138,0,19	1/1:16,0:15:29.89:258,30,0	1/1:7,13:20:2:77,2,0	0/0:16,0:14:3.64:0,4,193	1/1:18,0:17:6.91:190,7,0	0/0:27,0:27:29.88:0,30,340	0/1:11,1:12:2.36:185,0,2	0/1:17,0:16:1.22:269,0,1	1/1:23,0:22:7.92:41,8,0	1/1:21,0:20:32.89:264,33,0	0/1:13,0:12:0.03:0,0,0	1/1:9,0:9:17.64:117,18,0	1/1:24,0:23:11.48:200,11,0	1/1:19,0:18:29.97:254,30,0	0/1:20,0:18:87.49:210,0,87	0/1:20,0:20:44.51:167,0,45	1/1:2,0:1:2.99:24,3,0
chr10	26251578	.	AGC	A	5449.30	PASS	AB=1.000;AC=42;AF=0.750;AN=56;BaseQRankSum=-1.594;DP=504;FS=44.085;HRun=0;HaplotypeScore=108.9383;InbreedingCoeff=0.3848;MQ=68.81;MQ0=14;MQRankSum=2.227;QD=13.69;ReadPosRankSum=1.571;VQSLOD=2.5220;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:12,0:12:14.67:177,15,0	1/1:2,0:2:5.93:40,6,0	0/0:27,0:15:14.79:0,15,240	0/0:32,0:18:20.04:0,20,292	1/1:22,0:22:47.99:422,48,0	1/1:12,0:12:31.56:270,32,0	1/1:29,0:28:60.06:561,60,0	0/0:20,0:20:48.66:0,49,371	1/1:13,0:13:2.96:62,3,0	0/1:25,0:23:29.39:296,0,29	1/1:14,0:14:22.10:183,22,0	1/1:15,0:14:19.09:168,19,0	1/1:17,0:16:36.72:295,37,0	0/1:20,0:20:2.57:21,0,3	0/1:19,0:17:13.17:263,0,13	1/1:19,0:18:14.72:266,15,0	0/0:27,0:27:53.45:0,53,479	1/1:13,0:13:10.79:210,11,0	0/1:18,0:17:11.52:264,0,12	1/1:3,19:21:46.82:365,47,0	1/1:20,0:19:42.36:344,42,0	1/1:1,12:12:17.80:120,18,0	1/1:11,0:11:23.88:188,24,0	1/1:22,0:21:23.65:249,24,0	1/1:21,0:20:41.77:345,42,0	0/1:20,0:18:99:179,0,109	0/1:17,0:17:26.29:133,0,26	1/1:2,0:1:3:27,3,0
chr10	26252276	.	ATC	A	1944.04	PASS	AB=1.000;AC=15;AF=0.278;AN=54;BaseQRankSum=-7.771;DP=496;FS=1.801;HRun=0;HaplotypeScore=178.8721;InbreedingCoeff=0.0835;MQ=68.23;MQ0=9;MQRankSum=4.825;QD=8.76;ReadPosRankSum=-2.964;VQSLOD=2.6936;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:8.93:0,9,86	0/0:5,0:5:2.94:0,3,18	0/0:17,0:12:9.65:0,10,133	0/0:38,0:23:16.21:0,16,386	0/1:36,0:35:3.36:3,0,92	0/1:10,0:10:4.97:5,0,57	0/0:15,0:13:20.89:0,21,192	1/1:0,33:33:99:1381,99,0	0/0:15,0:15:5.91:0,6,52	0/0:23,0:23:36.39:0,36,599	0/0:26,0:26:5.97:0,6,43	0/1:15,0:15:10.36:10,0,19	0/1:19,0:18:11.67:12,0,30	0/1:12,0:11:0:0,0,0	0/0:16,0:16:17.97:0,18,171	0/1:12,0:12:18.73:19,0,38	1/1:1,14:15:36.12:550,36,0	0/0:11,0:11:29.30:0,29,219	0/1:14,0:14:34.20:34,0,303	0/0:21,0:21:17.85:0,18,142	./.	0/1:5,0:5:9.15:9,0,35	0/0:12,0:12:4.71:0,5,82	0/1:5,0:5:0.02:0,0,0	0/0:22,0:22:8.93:0,9,78	0/0:27,0:26:54.94:0,55,661	0/1:37,0:37:58.17:58,0,426	0/1:9,0:8:10.18:10,0,52
chr10	26252278	.	CTA	C	1380.10	PASS	AB=0.963;AC=23;AF=0.442;AN=52;BaseQRankSum=-9.626;DP=489;FS=1.229;HRun=0;HaplotypeScore=180.3281;InbreedingCoeff=0.0442;MQ=67.52;MQ0=9;MQRankSum=4.263;QD=4.51;ReadPosRankSum=-3.734;VQSLOD=2.1618;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,1:23:3.41:0,3,12	./.	0/0:17,0:12:5.86:0,6,76	0/0:38,0:22:24.40:0,24,293	0/1:34,2:35:31.22:32,0,31	1/1:8,1:9:1.22:34,1,0	0/0:14,1:13:5.12:0,5,46	1/1:34,0:34:55.78:484,56,0	0/0:15,0:15:0.85:0,1,2	0/1:22,1:23:20.92:21,0,173	0/0:26,0:26:0.51:0,1,1	1/1:13,1:14:3:34,3,0	1/1:18,1:18:5.83:58,6,0	0/1:12,0:11:0:0,0,0	0/0:16,0:16:11.57:0,12,59	1/1:9,2:11:6.02:73,6,0	1/1:14,0:13:35.81:267,36,0	0/1:10,0:10:3.37:3,0,20	0/1:12,2:14:97.22:121,0,97	0/0:19,1:20:2.94:0,3,20	./.	0/1:5,0:5:10.37:33,0,10	0/1:11,0:11:9.96:47,0,10	0/0:5,0:5:0:0,0,0	0/1:20,2:22:1.05:1,0,9	0/1:28,0:27:52.18:52,0,142	0/1:32,4:36:99:202,0,163	0/1:8,0:7:4.66:60,0,5
chr10	26252280	.	A	ATCTATCTA	4469.53	PASS	AB=1.000;AC=41;AF=0.788;AN=52;BaseQRankSum=1.640;DP=494;FS=1.323;HRun=0;HaplotypeScore=207.2398;InbreedingCoeff=0.4458;MQ=66.31;MQ0=9;MQRankSum=-7.903;QD=11.20;ReadPosRankSum=1.093;VQSLOD=4.0435;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:23:11.94:149,12,0	1/1:3,0:5:2.94:18,3,0	0/1:16,0:11:9.15:9,0,70	0/1:38,0:22:5.19:5,0,335	1/1:19,0:35:7.61:139,8,0	1/1:4,0:8:3.37:16,3,0	1/1:12,0:14:17.92:183,18,0	0/0:34,0:34:78.21:0,78,1335	1/1:10,0:15:6.02:147,6,0	1/1:18,0:25:61.78:699,62,0	1/1:11,0:26:5.86:121,6,0	./.	0/0:12,0:19:0:0,0,0	0/0:8,0:10:0:0,0,0	1/1:1,1:16:15.05:518,15,0	1/1:10,0:11:5.99:50,6,0	0/0:14,0:13:36.07:0,36,624	1/1:4,0:10:20.57:180,21,0	1/1:9,0:14:33.28:520,33,0	1/1:15,0:21:9.03:155,9,0	./.	1/1:4,0:5:2.92:17,3,0	1/1:6,0:11:8.87:109,9,0	0/1:5,0:5:0.04:0,0,0	1/1:13,0:22:5.93:55,6,0	1/1:14,0:28:73.99:836,74,0	1/1:32,0:39:38.91:474,39,0	1/1:4,0:7:8.81:69,9,0
chr10	26253222	.	AATCTTAGCTCTC	A	2104.12	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.178;DP=570;FS=2.746;HRun=0;HaplotypeScore=223.2551;InbreedingCoeff=0.9792;MQ=92.20;MQ0=0;MQRankSum=-4.935;QD=51.32;ReadPosRankSum=-0.829;VQSLOD=3.2796;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:45.32:0,45,2358	0/0:10,0:10:30.10:0,30,1387	0/0:20,0:20:60.21:0,60,2895	0/0:29,0:29:75.25:0,75,3623	0/0:20,0:20:60.20:0,60,2955	0/0:31,0:31:87.30:0,87,4626	0/0:19,0:19:57.20:0,57,2799	1/1:9,17:26:51.15:1552,51,0	0/0:18,0:18:54.18:0,54,2658	0/0:28,0:28:78.27:0,78,3969	0/0:27,0:27:81.28:0,81,4207	0/0:18,0:18:54.19:0,54,2671	0/0:18,0:18:51.18:0,51,2612	0/0:19,0:19:57.20:0,57,2931	0/0:26,0:26:78.27:0,78,4107	0/0:19,0:19:57.20:0,57,2972	1/1:4,11:15:18.53:672,19,0	0/0:9,0:9:24.08:0,24,1209	0/0:22,0:22:66.21:0,66,2949	0/0:39,0:39:99:0,108,5666	0/0:19,0:19:57.20:0,57,3001	0/0:18,0:18:54.19:0,54,2790	0/0:17,0:17:42.14:0,42,2213	0/0:18,0:18:51.18:0,51,2739	0/0:16,0:16:48.16:0,48,2342	0/0:21,0:21:63.22:0,63,3321	0/0:27,0:27:78.25:0,78,4045	0/0:4,0:4:12.01:0,12,514
chr10	26254144	.	GAC	G	3189.16	PASS	AB=0.957;AC=34;AF=0.607;AN=56;BaseQRankSum=-3.373;DP=811;FS=51.305;HRun=0;HaplotypeScore=194.1227;InbreedingCoeff=-0.0213;MQ=41.04;MQ0=114;MQRankSum=5.137;QD=4.56;ReadPosRankSum=0.945;VQSLOD=1.2732;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:34,1:32:1.22:70,1,0	1/1:14,0:14:6.18:251,6,0	0/0:4,0:2:5.81:0,6,56	0/0:6,0:2:1.15:0,1,14	1/1:32,0:20:18.06:224,18,0	1/1:25,0:21:15.03:177,15,0	0/1:30,0:24:8.18:123,0,8	0/0:45,0:24:70.31:0,70,951	0/1:23,2:23:16.41:98,0,16	0/1:49,1:35:99:292,0,285	0/1:24,1:22:38.99:65,0,39	0/1:21,2:22:6.52:62,0,7	0/1:36,2:35:34.83:178,0,35	1/1:26,1:25:3.77:100,4,0	0/0:35,0:30:66.08:0,66,1071	1/1:31,2:31:3.86:185,4,0	0/0:22,0:22:25.27:0,25,505	0/1:21,2:22:89:203,0,89	0/1:27,1:16:69.40:69,0,197	1/1:32,2:27:2.94:30,3,0	1/1:49,1:40:5.84:77,6,0	1/1:34,1:29:17.72:225,18,0	0/1:34,2:31:0.29:162,0,0	1/1:22,1:21:11.82:150,12,0	1/1:26,0:24:11.64:154,12,0	0/1:45,0:29:99:182,0,272	0/1:30,2:30:17.41:139,0,17	0/1:8,0:7:19.48:139,0,19
chr10	26254152	.	C	CAG	1605.60	PASS	AB=0.982;AC=35;AF=0.625;AN=56;BaseQRankSum=0.493;DP=810;FS=65.667;HRun=0;HaplotypeScore=201.9289;InbreedingCoeff=0.0387;MQ=41.82;MQ0=111;MQRankSum=5.293;QD=2.33;ReadPosRankSum=-2.981;VQSLOD=0.1820;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:32,1:30:4.10:30,4,0	1/1:13,1:14:4.08:159,4,0	0/0:4,0:2:5.97:0,6,61	0/0:11,0:6:17.21:0,17,146	0/1:32,2:23:49.27:130,0,49	1/1:23,1:20:14.51:96,15,0	1/1:25,1:20:7.40:67,7,0	0/0:47,0:27:81.09:0,81,1073	0/1:27,1:26:36.77:55,0,37	0/1:52,0:37:99:143,0,295	0/1:25,0:21:16.52:17,0,31	1/1:19,1:19:2.96:52,3,0	0/1:35,1:32:85.74:87,0,86	1/1:26,3:27:1.88:28,2,0	0/0:33,0:28:69.19:0,69,1009	1/1:36,1:35:4.43:132,4,0	0/0:24,0:24:44.12:0,44,546	0/1:23,0:22:99:101,0,123	0/1:21,0:15:16.68:17,0,217	1/1:34,0:27:3.01:30,3,0	1/1:48,1:39:5.71:29,6,0	1/1:31,1:27:17.30:113,17,0	0/1:37,1:33:0.44:103,0,0	1/1:20,3:21:11.10:71,11,0	1/1:25,0:23:11.48:77,11,0	0/1:44,0:28:90.48:90,0,347	0/1:31,2:31:6.38:94,0,6	0/1:10,0:9:55.75:56,0,95
chr10	26254156	.	GACACAC	G	4513.17	PASS	AB=0.696;AC=22;AF=0.393;AN=56;BaseQRankSum=2.579;DP=812;FS=3.812;HRun=0;HaplotypeScore=215.0141;InbreedingCoeff=0.1923;MQ=42.45;MQ0=104;MQRankSum=-2.130;QD=9.58;ReadPosRankSum=0.374;VQSLOD=3.7238;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:9,24:30:4.70:60,0,5	1/1:13,2:15:11.58:297,12,0	0/0:9,0:5:13.98:0,14,166	0/0:14,0:8:22.53:0,23,206	1/1:29,4:22:20.14:351,20,0	0/0:10,12:18:2.50:0,2,9	1/1:22,4:20:3.96:161,4,0	0/0:44,0:28:72.15:0,72,1611	0/1:8,19:25:9.94:149,0,10	0/1:32,18:36:99:722,0,115	0/0:15,12:23:5.68:0,6,38	0/1:6,16:21:9.88:132,0,10	0/1:16,20:32:3.47:341,0,3	1/1:10,18:27:3:67,3,0	0/0:32,0:27:66.05:0,66,1873	0/1:10,26:34:5.13:237,0,5	0/0:24,0:24:46.33:0,46,1044	0/1:21,2:22:5.21:363,0,5	1/1:12,11:17:32.82:390,33,0	0/0:14,18:26:0:0,0,0	0/0:24,26:41:4.64:0,5,20	0/1:20,13:28:9.85:50,0,10	0/0:16,21:32:3.02:0,3,11	0/0:10,13:21:2.85:0,3,17	0/0:10,16:24:8.54:0,9,40	1/1:25,18:27:26.16:663,26,0	0/1:13,20:31:10.64:310,0,11	0/1:10,0:9:13.82:220,0,14
chr10	26254162	.	C	CAG	1093.18	PASS	AB=0.978;AC=23;AF=0.411;AN=56;BaseQRankSum=3.614;DP=779;FS=0.524;HRun=0;HaplotypeScore=201.0925;InbreedingCoeff=-0.1585;MQ=44.31;MQ0=92;MQRankSum=3.206;QD=2.12;ReadPosRankSum=-2.646;VQSLOD=2.0086;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:32,1:29:13.03:13,0,17	0/1:13,1:14:16.85:131,0,17	0/0:13,0:6:16.98:0,17,169	0/0:16,0:10:17.56:0,18,234	1/1:33,2:24:1.95:208,2,0	1/1:20,1:17:3.01:30,3,0	0/1:24,1:19:15.84:48,0,16	0/0:45,0:31:81.04:0,81,1069	0/1:25,1:24:4.10:13,0,4	0/1:43,0:33:99:204,0,199	0/0:26,0:22:6:0,6,58	0/1:21,1:21:11.79:15,0,12	0/1:34,1:31:32.57:33,0,84	0/0:23,3:25:2.19:0,2,7	0/0:33,0:29:75.04:0,75,1033	0/1:32,1:31:5.79:67,0,6	0/0:23,0:23:44.76:0,45,597	0/1:23,0:22:67.07:182,0,67	0/1:22,0:16:32.92:33,0,109	0/1:30,0:25:0:0,0,0	0/0:48,1:40:6.82:0,7,51	1/1:27,1:25:11.93:117,12,0	0/0:31,1:28:2.64:0,3,15	1/1:17,2:18:2.54:28,3,0	0/1:25,0:24:27.17:27,0,36	0/1:40,0:26:37.36:37,0,144	0/1:29,2:29:21.54:22,0,28	0/1:11,0:10:35.05:42,0,35
chr10	26254812	.	GT	G	7989.24	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-0.237;DP=507;FS=3.762;HRun=11;HaplotypeScore=66.2399;InbreedingCoeff=0.9095;MQ=70.06;MQ0=0;MQRankSum=-3.178;QD=19.16;ReadPosRankSum=4.634;VQSLOD=5.8461;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,19:23:40.18:448,40,0	1/1:0,3:3:5.99:49,6,0	0/0:10,0:10:20.87:0,21,177	0/0:9,0:9:13.98:0,14,109	1/1:6,9:16:34.96:273,35,0	1/1:1,15:16:47.93:391,48,0	1/1:3,19:22:53.91:443,54,0	0/0:27,1:30:35.11:0,35,520	1/1:5,15:20:44.92:369,45,0	1/1:7,16:23:18.93:362,19,0	1/1:4,19:23:2.15:385,2,0	1/1:3,9:12:26.93:222,27,0	1/1:5,23:28:68.89:565,69,0	1/1:8,13:21:12.91:310,13,0	0/0:4,0:15:36.77:0,37,189	1/1:3,14:17:15.94:337,16,0	0/0:25,1:26:26.48:0,26,481	1/1:2,11:13:26.97:222,27,0	1/1:11,9:20:35.93:293,36,0	1/1:4,23:27:68.91:566,69,0	1/1:0,12:13:38:301,38,0	1/1:6,9:15:41.83:334,42,0	1/1:3,15:18:50.90:412,51,0	1/1:1,10:11:26.96:221,27,0	1/1:5,17:22:56.90:463,57,0	1/1:1,20:22:61.97:499,62,0	1/1:4,15:21:54.99:430,55,0	1/1:6,5:11:11.94:94,12,0
chr10	26255298	.	T	TG	23202.53	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-7.491;DP=600;FS=37.139;HRun=0;HaplotypeScore=48.8052;InbreedingCoeff=0.9701;MQ=83.07;MQ0=0;MQRankSum=-9.898;QD=41.07;ReadPosRankSum=5.396;VQSLOD=2.3641;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,45:46:99:1723,111,0	1/1:1,11:12:30.10:469,30,0	0/0:17,0:17:51.12:0,51,674	0/0:18,0:18:53.75:0,54,691	1/1:0,21:21:60.20:917,60,0	1/1:0,28:28:75.26:1171,75,0	1/1:0,19:19:51.17:796,51,0	1/1:0,33:33:90.27:1345,90,0	1/1:0,15:15:33.11:516,33,0	1/1:0,18:18:54.13:792,54,0	1/1:0,19:19:57.19:891,57,0	1/1:0,17:17:42.14:657,42,0	1/1:0,16:16:42.14:657,42,0	1/1:0,23:23:63.21:985,63,0	1/1:0,17:17:42.14:656,42,0	1/1:0,14:14:33.11:516,33,0	1/1:0,30:30:75.26:1170,75,0	1/1:0,13:13:36.12:560,36,0	1/1:1,23:24:69.23:1073,69,0	1/1:0,29:29:81.27:1242,81,0	1/1:1,13:14:33.11:514,33,0	1/1:0,27:27:74.97:1081,75,0	1/1:1,15:17:48.16:740,48,0	1/1:1,17:18:45.15:703,45,0	1/1:0,33:33:93.32:1454,93,0	1/1:0,24:24:72.24:1122,72,0	1/1:1,34:35:84.28:1312,84,0	1/1:0,3:3:9.03:141,9,0
chr10	26256337	.	ATATTTC	A	27231.30	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=10.804;DP=562;FS=5.919;HRun=0;HaplotypeScore=137.3594;InbreedingCoeff=0.9482;MQ=81.85;MQ0=0;MQRankSum=-14.449;QD=59.59;ReadPosRankSum=6.056;VQSLOD=4.9435;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,18:19:45.11:1009,45,0	1/1:0,9:9:21.07:509,21,0	0/0:22,0:21:63.21:0,63,2067	0/0:28,0:28:73.46:0,73,2317	1/1:2,20:22:48.16:1098,48,0	1/1:0,18:18:42.14:1027,42,0	1/1:2,15:17:27.09:661,27,0	0/0:37,0:37:99:0,102,3526	1/1:0,20:20:54.19:1325,54,0	1/1:1,23:24:66.23:1587,66,0	1/1:0,19:19:57.19:1350,57,0	1/1:0,22:22:54.19:1327,54,0	1/1:1,21:22:54.19:1325,54,0	1/1:1,27:28:75.26:1842,75,0	1/1:0,20:20:42.14:1034,42,0	1/1:0,24:24:63.22:1550,63,0	0/0:18,0:18:54.17:0,54,1833	1/1:2,9:11:21.07:517,21,0	1/1:2,21:23:63.15:1353,63,0	1/1:0,23:23:63.22:1508,63,0	1/1:2,11:13:27.09:622,27,0	1/1:0,14:14:39.09:895,39,0	1/1:2,15:17:35.86:880,36,0	1/1:2,9:11:18.06:443,18,0	1/1:0,27:27:75.26:1794,75,0	1/1:1,23:24:66.23:1597,66,0	1/1:1,28:29:78.27:1906,78,0	1/1:0,1:1:3.01:74,3,0
chr10	26256625	.	GGTGTGTGT	G	206.12	PASS	AB=0.946;AC=13;AF=0.464;AN=28;BaseQRankSum=0.377;DP=530;FS=7.160;HRun=0;HaplotypeScore=194.2224;InbreedingCoeff=0.1962;MQ=79.32;MQ0=15;MQRankSum=-1.791;QD=1.30;ReadPosRankSum=1.493;VQSLOD=2.0446;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:9,0:10:2.99:0,3,24	./.	./.	1/1:11,3:14:3.01:33,3,0	./.	0/0:23,0:22:0.47:0,0,1	./.	0/1:22,0:21:0:0,0,0	./.	1/1:12,0:11:6.02:120,6,0	0/0:15,0:14:0.47:0,0,1	./.	0/1:11,0:12:0:0,0,0	1/1:21,1:22:2.76:73,3,0	0/1:23,0:24:9.89:10,0,18	0/1:18,0:19:14.08:50,0,14	0/0:19,0:18:6.02:0,6,170	./.	./.	0/0:33,0:32:3.01:0,3,41	./.	./.	0/1:15,2:17:0.01:0,0,1	./.	./.	1/1:15,0:16:2.68:11,3,0	./.
chr10	26258284	.	AC	A	1904.06	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.330;DP=611;FS=3.340;HRun=2;HaplotypeScore=104.8539;InbreedingCoeff=0.9165;MQ=86.50;MQ0=0;MQRankSum=-0.762;QD=33.40;ReadPosRankSum=-1.124;VQSLOD=3.0759;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:75.25:0,75,1123	0/0:14,0:14:36.12:0,36,539	0/0:22,0:22:60.20:0,60,897	0/0:22,0:22:54.14:0,54,766	0/0:35,0:35:69.23:0,69,1027	0/0:21,0:21:60.20:0,60,899	0/0:17,0:17:48.16:0,48,716	1/1:2,35:37:99:1363,105,0	0/0:24,0:24:72.24:0,72,1079	0/0:34,0:34:96.29:0,96,1381	0/0:13,0:13:36.12:0,36,537	0/0:20,0:20:60.20:0,60,899	0/0:17,0:17:51.17:0,51,762	0/0:20,0:20:60.18:0,60,841	0/0:22,0:22:60.20:0,60,898	0/0:24,0:24:69.23:0,69,1015	1/1:2,18:20:51.17:662,51,0	0/0:18,0:18:54.18:0,54,809	0/0:21,0:21:63.20:0,63,926	0/0:26,0:26:69.19:0,69,1001	0/0:21,0:21:63.21:0,63,944	0/0:19,0:19:54.18:0,54,807	0/0:19,0:19:51.17:0,51,762	0/0:17,0:17:51.17:0,51,764	0/0:22,0:22:63.19:0,63,915	0/0:29,0:29:87.29:0,87,1302	0/0:30,0:30:90.30:0,90,1348	0/0:1,0:1:3.01:0,3,45
chr10	26260372	.	G	GACTACTCATTA	78967.16	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-8.189;DP=678;FS=12.950;HRun=0;HaplotypeScore=179.2077;InbreedingCoeff=0.9850;MQ=77.82;MQ0=0;MQRankSum=-11.695;QD=126.55;ReadPosRankSum=5.530;VQSLOD=4.7990;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,14:23:60.21:2946,60,0	1/1:1,6:10:21.07:1208,21,0	0/0:24,0:24:60.63:0,61,1717	0/0:30,0:30:87.29:0,87,2573	1/1:15,18:35:78.27:3653,78,0	1/1:11,16:29:72.25:3760,72,0	1/1:8,8:17:48.16:2553,48,0	1/1:34,11:47:99:5783,129,0	1/1:4,12:20:51.17:2721,51,0	1/1:8,19:30:84.27:4330,84,0	1/1:16,14:33:75.25:3309,75,0	1/1:5,13:18:48.16:2742,48,0	1/1:5,14:20:57.20:3148,57,0	1/1:9,15:25:72.25:3730,72,0	1/1:11,13:27:63.22:3172,63,0	1/1:6,15:23:60.21:3234,60,0	1/1:7,9:18:42.14:2269,42,0	1/1:2,5:7:18.06:902,18,0	1/1:10,7:21:54.18:2365,54,0	1/1:20,19:44:99:5282,111,0	1/1:10,6:18:27.09:1352,27,0	1/1:9,15:26:72.25:3832,72,0	1/1:5,15:22:57.11:2654,57,0	1/1:7,7:15:30.10:1300,30,0	1/1:12,18:32:87.30:4061,87,0	1/1:10,14:24:75.26:3892,75,0	1/1:10,17:28:75.26:3906,75,0	1/1:0,5:9:15.05:863,15,0
chr10	26260668	.	C	CA	18028.19	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=8.328;DP=535;FS=0.000;HRun=3;HaplotypeScore=134.8559;InbreedingCoeff=0.9464;MQ=82.99;MQ0=0;MQRankSum=-9.169;QD=36.06;ReadPosRankSum=4.860;VQSLOD=3.7529;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,20:23:63.21:867,63,0	1/1:2,11:13:33.11:461,33,0	0/0:20,0:20:54.14:0,54,644	0/0:15,0:15:36.11:0,36,431	1/1:2,26:29:78.17:1036,78,0	1/1:2,21:23:63.21:881,63,0	1/1:0,11:11:33.11:459,33,0	1/1:2,20:23:63.18:816,63,0	1/1:0,17:17:48.16:672,48,0	1/1:4,22:26:63.21:881,63,0	1/1:0,21:21:57.10:752,57,0	1/1:2,18:20:51.17:702,51,0	1/1:2,15:18:48.16:664,48,0	1/1:0,12:13:33.11:455,33,0	1/1:0,8:9:27.09:371,27,0	1/1:2,16:20:48.16:658,48,0	1/1:2,16:18:39.13:544,39,0	1/1:0,17:17:45.15:630,45,0	1/1:2,13:16:36.12:497,36,0	1/1:2,39:41:99:1485,111,0	1/1:0,16:16:45.15:630,45,0	1/1:2,12:14:33.11:448,33,0	1/1:0,21:22:57.19:796,57,0	1/1:2,9:11:24.08:336,24,0	1/1:1,26:27:81.27:1120,81,0	1/1:1,18:20:57.18:773,57,0	1/1:4,25:30:75.19:1012,75,0	1/1:0,2:2:6.02:84,6,0
chr10	26260829	.	TGG	T	5997.16	PASS	AB=0.787;AC=52;AF=0.929;AN=56;BaseQRankSum=-2.763;DP=415;FS=13.092;HRun=12;HaplotypeScore=69.8976;InbreedingCoeff=-0.0919;MQ=78.87;MQ0=0;MQRankSum=-1.333;QD=14.45;ReadPosRankSum=4.781;VQSLOD=1.9746;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,16:24:39.05:394,39,0	1/1:1,4:5:6:60,6,0	0/1:20,4:21:70.96:188,0,71	0/1:15,1:16:7.24:92,0,7	0/1:5,7:12:12.14:52,0,12	1/1:3,12:16:35.82:348,36,0	1/1:5,10:16:32.78:316,33,0	1/1:11,4:14:11.98:122,12,0	1/1:5,4:10:17.77:164,18,0	1/1:5,4:9:15.03:152,15,0	1/1:3,5:8:15.03:152,15,0	1/1:7,6:13:18.04:181,18,0	1/1:7,12:19:13.78:340,14,0	1/1:6,9:15:24.02:244,24,0	1/1:6,0:17:29.65:125,30,0	1/1:2,9:12:14.74:205,15,0	1/1:8,14:23:45.07:456,45,0	1/1:3,8:11:27.05:274,27,0	0/1:11,3:15:21.94:113,0,22	1/1:5,5:10:17.52:161,18,0	1/1:13,11:25:13.80:322,14,0	1/1:6,6:12:14.95:139,15,0	1/1:4,3:7:6.01:61,6,0	1/1:4,15:19:33.04:336,33,0	1/1:4,8:12:21.03:213,21,0	1/1:8,9:19:35.45:321,35,0	1/1:8,19:26:25.11:407,25,0	1/1:0,2:2:6.01:61,6,0
chr10	26261089	.	C	CATACATATATGT	23228.02	PASS	AC=50;AF=0.926;AN=54;BaseQRankSum=-3.429;DP=355;FS=22.807;HRun=0;HaplotypeScore=147.6859;InbreedingCoeff=0.6842;MQ=71.05;MQ0=2;MQRankSum=-6.092;QD=78.21;ReadPosRankSum=4.685;VQSLOD=3.2182;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,6:19:12.51:674,13,0	1/1:2,0:2:2.93:172,3,0	0/0:26,0:19:33.04:0,33,623	0/0:27,0:15:11.93:0,12,285	1/1:10,4:15:12.04:644,12,0	1/1:8,6:14:15.52:799,16,0	1/1:5,1:6:8.92:481,9,0	1/1:27,0:27:63.17:2792,63,0	1/1:2,7:9:21.07:1149,21,0	1/1:4,7:11:21.07:1157,21,0	1/1:5,5:11:15.99:810,16,0	1/1:6,8:14:21.07:1182,21,0	1/1:6,7:13:26.94:1428,27,0	1/1:6,5:11:15.05:823,15,0	1/1:5,8:13:9.02:510,9,0	1/1:4,8:12:18.53:1016,19,0	1/1:10,0:10:18.06:877,18,0	./.	1/1:7,3:14:30.10:1004,30,0	1/1:3,8:11:27.08:1462,27,0	1/1:5,3:8:5.80:336,6,0	1/1:7,8:15:24.07:1286,24,0	1/1:3,5:8:11.11:669,11,0	1/1:8,4:12:6.02:332,6,0	1/1:6,4:11:12.51:684,13,0	1/1:8,8:16:36.12:1570,36,0	1/1:4,5:9:18.06:998,18,0	1/1:6,0:6:9:373,9,0
chr10	26261099	.	TGC	T	3203.88	PASS	AB=0.973;AC=39;AF=0.750;AN=52;BaseQRankSum=6.846;DP=282;FS=17.419;HRun=0;HaplotypeScore=133.2979;InbreedingCoeff=0.1756;MQ=58.57;MQ0=5;MQRankSum=-4.500;QD=15.48;ReadPosRankSum=-4.258;VQSLOD=1.5413;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:11:8.98:133,9,0	1/1:1,1:2:3.01:44,3,0	0/0:26,0:14:38.71:0,39,621	0/0:26,0:10:14.41:0,14,196	1/1:9,0:9:9.03:133,9,0	0/1:9,0:9:34.26:121,0,34	1/1:5,1:6:2.88:44,3,0	0/1:16,5:21:99:166,0,416	1/1:8,0:8:18.06:267,18,0	0/1:9,0:9:49.72:50,0,52	0/1:12,0:12:29.12:204,0,29	1/1:13,0:13:18.06:266,18,0	0/1:10,0:10:0.85:162,0,1	1/1:7,0:7:12.04:178,12,0	1/1:9,0:9:8.74:133,9,0	1/1:9,0:9:17.63:235,18,0	1/1:0,7:7:14.92:223,15,0	./.	0/0:11,0:11:14.65:0,15,299	1/1:10,0:10:20.94:311,21,0	1/1:5,0:5:2.88:44,3,0	1/1:13,0:13:17.79:267,18,0	1/1:8,0:8:11.91:177,12,0	./.	1/1:9,0:9:8.98:133,9,0	0/1:10,0:10:30.82:31,0,81	0/1:7,0:7:20.35:20,0,47	1/1:3,0:3:2.98:21,3,0
chr10	26261117	.	TACACAC	T	353.68	PASS	AB=0.838;AC=21;AF=0.420;AN=50;BaseQRankSum=0.505;DP=201;FS=6.690;HRun=0;HaplotypeScore=116.9922;InbreedingCoeff=0.3490;MQ=52.23;MQ0=5;MQRankSum=-0.505;QD=4.59;ReadPosRankSum=0.650;VQSLOD=1.9144;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:4,2:8:0:0,0,1	0/0:1,0:3:0:0,0,0	0/0:15,0:5:3:0,3,29	0/0:21,0:5:0:0,0,0	./.	0/1:6,1:10:0:0,0,1	0/0:1,2:4:0:0,0,0	0/0:5,0:5:2.68:0,3,11	1/1:8,0:8:3:29,3,0	./.	./.	0/0:4,3:8:0:0,0,0	1/1:5,3:9:0.47:1,0,0	0/0:5,1:7:0:0,0,0	0/0:7,0:7:0:0,0,1	1/1:4,2:7:2.58:53,3,0	1/1:7,0:7:5.60:53,6,0	1/1:1,2:3:3.01:54,3,0	1/1:7,1:8:5.99:80,6,0	0/0:6,5:11:0:0,0,0	0/1:4,0:4:0:0,0,0	0/1:6,2:8:0:0,0,1	0/0:3,2:5:0:0,0,0	0/0:3,0:3:2.92:0,3,17	0/0:4,0:6:0:0,0,1	1/1:5,2:7:9.03:156,9,0	1/1:4,1:5:2.97:20,3,0	1/1:1,0:1:0.89:2,1,0
chr10	26261129	.	CACACACAT	C	280.09	PASS	AB=0.929;AC=12;AF=0.231;AN=52;BaseQRankSum=0.571;DP=161;FS=0.000;HRun=0;HaplotypeScore=88.9096;InbreedingCoeff=0.3124;MQ=33.99;MQ0=4;MQRankSum=-1.401;QD=8.24;ReadPosRankSum=2.335;VQSLOD=1.4573;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:7,1:8:0.47:0,0,1	0/0:3,0:3:0:0,0,0	0/0:7,0:1:3:0,3,29	0/0:13,0:1:0:0,0,0	./.	0/0:11,0:11:0.47:0,0,1	0/0:3,0:3:0:0,0,0	0/0:15,0:15:17.43:0,17,106	0/0:5,0:5:2.74:0,3,12	0/0:4,0:4:5.98:0,6,54	./.	0/0:5,0:5:0.47:0,0,1	1/1:7,0:7:0.47:1,0,0	0/0:5,1:6:0:0,0,0	0/0:7,0:7:0:0,0,0	1/1:4,0:4:2.95:53,3,0	1/1:7,0:7:4.06:50,4,0	1/1:3,0:3:3.01:54,3,0	0/1:3,0:3:4.38:72,0,4	0/0:12,0:12:0:0,0,0	0/0:3,0:3:0:0,0,0	0/0:4,0:4:0:0,0,0	0/0:5,0:5:0:0,0,0	0/0:1,0:1:2.92:0,3,17	0/0:4,0:4:0.47:0,0,1	0/1:5,1:6:2.96:130,0,3	1/1:4,0:4:2.97:20,3,0	0/0:2,0:2:0.43:0,0,2
chr10	26261704	.	A	ATGCG	120.09	PASS	AB=0.972;AC=7;AF=0.159;AN=44;BaseQRankSum=3.610;DP=147;FS=0.000;HRun=0;HaplotypeScore=45.9126;InbreedingCoeff=-0.0204;MQ=53.53;MQ0=2;MQRankSum=-3.162;QD=2.61;ReadPosRankSum=3.524;VQSLOD=0.7756;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:5:3.01:0,3,52	0/0:4,0:4:3.01:0,3,51	0/0:10,0:6:12.04:0,12,220	0/0:7,0:5:6:0,6,84	0/0:6,0:6:3.01:0,3,52	0/0:13,0:13:9.03:0,9,163	0/0:2,0:2:3.01:0,3,47	0/1:21,4:25:99:175,0,787	0/0:3,0:3:3.01:0,3,47	0/0:4,0:4:6.02:0,6,87	0/0:6,0:6:7.56:0,8,81	./.	0/0:5,0:5:9.02:0,9,128	0/1:2,0:2:0:0,0,0	0/0:6,0:6:6.02:0,6,95	1/1:3,0:3:0.47:1,0,0	0/0:8,0:8:9.03:0,9,155	0/0:2,0:2:3.01:0,3,53	0/1:6,0:6:19.77:20,0,218	./.	./.	./.	0/0:4,0:4:6.02:0,6,87	./.	0/1:4,0:4:0.04:0,0,0	0/1:6,0:6:14.33:14,0,133	0/0:12,0:12:1.28:0,1,239	./.
chr10	26262746	.	CATAAA	C	288.72	PASS	AB=0.788;AC=2;AF=0.036;AN=56;BaseQRankSum=4.316;DP=532;FS=0.000;HRun=0;HaplotypeScore=147.9393;InbreedingCoeff=-0.0380;MQ=75.36;MQ0=0;MQRankSum=4.731;QD=10.31;ReadPosRankSum=-1.135;VQSLOD=2.3650;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:54.12:0,54,1454	0/0:10,0:10:30.10:0,30,968	0/1:6,3:9:99:167,0,424	0/1:15,4:19:99:211,0,586	0/0:28,0:28:78.25:0,78,2380	0/0:19,0:19:54.18:0,54,1685	0/0:19,0:19:42.14:0,42,1308	0/0:34,0:34:93.32:0,93,2999	0/0:19,0:19:54.19:0,54,1739	0/0:28,0:28:84.29:0,84,2659	0/0:18,0:18:54.17:0,54,1671	0/0:21,0:21:54.19:0,54,1708	0/0:26,0:26:66.23:0,66,2121	0/0:21,0:21:63.22:0,63,2023	0/0:23,0:23:63.20:0,63,1942	0/0:16,0:16:45.15:0,45,1453	0/0:16,0:16:42.14:0,42,1335	0/0:7,0:7:15.05:0,15,471	0/0:18,0:18:48.16:0,48,1541	0/0:29,0:29:87.30:0,87,2667	0/0:12,0:11:30.10:0,30,941	0/0:14,0:14:42.13:0,42,1271	0/0:24,0:24:72.22:0,72,2073	0/0:10,0:10:27.09:0,27,825	0/0:17,0:17:48.15:0,48,1422	0/0:25,0:25:72.25:0,72,2292	0/0:25,0:25:75.26:0,75,2238	0/0:6,0:6:18.06:0,18,581
chr10	26262794	.	G	GAAACAAAGT	58301.55	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-6.812;DP=536;FS=14.409;HRun=0;HaplotypeScore=118.6482;InbreedingCoeff=0.9466;MQ=78.25;MQ0=0;MQRankSum=-9.982;QD=117.54;ReadPosRankSum=4.269;VQSLOD=5.6040;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,8:11:27.09:1141,27,0	1/1:2,10:12:33.11:1555,33,0	0/0:19,0:19:56.68:0,57,1477	0/0:21,0:21:51.15:0,51,1357	1/1:3,14:23:60.17:2142,60,0	1/1:8,20:28:81.28:3762,81,0	1/1:3,12:19:45.15:2187,45,0	1/1:18,10:39:99:4530,117,0	1/1:9,10:20:57.19:2456,57,0	1/1:11,18:31:90.31:4268,90,0	1/1:5,7:12:36.12:1554,36,0	1/1:6,8:17:39.13:1732,39,0	1/1:3,16:25:57.20:2619,57,0	1/1:6,15:23:63.22:3007,63,0	1/1:7,10:18:48.16:2268,48,0	1/1:5,9:16:39.13:1799,39,0	1/1:2,10:16:35.73:1627,36,0	1/1:0,4:4:9.03:446,9,0	1/1:12,13:31:87.29:3656,87,0	1/1:10,19:30:90.31:3880,90,0	1/1:4,1:10:12.04:449,12,0	1/1:6,11:17:51.18:2302,51,0	1/1:5,14:20:54.05:2454,54,0	1/1:4,6:13:23.60:1055,24,0	1/1:2,13:17:45.15:2123,45,0	1/1:4,11:20:60.21:2554,60,0	1/1:5,9:17:45.15:2031,45,0	1/1:3,3:7:15.05:706,15,0
chr10	26263954	.	C	CT	19877.38	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-4.892;DP=638;FS=0.757;HRun=5;HaplotypeScore=84.4454;InbreedingCoeff=0.9952;MQ=67.01;MQ0=0;MQRankSum=-2.722;QD=33.30;ReadPosRankSum=5.309;VQSLOD=4.7290;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,30:30:72.23:947,72,0	1/1:2,10:12:30.10:395,30,0	0/0:23,0:15:39.07:0,39,403	0/0:18,0:12:36.09:0,36,379	1/1:2,28:30:78.25:1026,78,0	1/1:4,19:23:57.19:750,57,0	1/1:2,14:16:42.14:553,42,0	1/1:4,30:32:84.25:1066,84,0	1/1:4,14:18:42.14:550,42,0	1/1:1,26:27:75.21:957,75,0	1/1:2,26:28:69.18:888,69,0	1/1:1,14:15:39.13:513,39,0	1/1:2,22:24:69.22:905,69,0	1/1:0,19:19:54.18:711,54,0	1/1:0,12:12:33.11:434,33,0	1/1:1,17:18:45.15:592,45,0	1/1:5,20:25:51.17:669,51,0	1/1:3,12:15:36.12:474,36,0	1/1:5,14:16:42.13:545,42,0	1/1:1,38:39:99:1362,108,0	1/1:1,17:18:42.14:553,42,0	1/1:0,27:27:72.23:947,72,0	1/1:0,19:19:51.16:671,51,0	1/1:1,22:23:63.20:829,63,0	1/1:0,34:33:87.28:1145,87,0	1/1:1,19:20:57.13:716,57,0	1/1:4,40:44:99:1443,111,0	1/1:0,8:8:18.06:237,18,0
chr10	26265120	.	GC	G	15273.93	PASS	AB=1.000;AC=54;AF=0.964;AN=56;BaseQRankSum=0.300;DP=493;FS=9.082;HRun=1;HaplotypeScore=121.3793;InbreedingCoeff=-0.0380;MQ=59.48;MQ0=1;MQRankSum=-3.635;QD=30.98;ReadPosRankSum=3.598;VQSLOD=3.7462;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,6:6:15.05:186,15,0	1/1:0,7:7:21.07:260,21,0	0/1:14,0:13:79.91:86,0,80	0/1:15,0:11:46.83:63,0,47	1/1:1,26:27:66.21:823,66,0	1/1:0,15:15:42.13:520,42,0	1/1:0,11:10:30.09:372,30,0	1/1:2,9:9:21.07:260,21,0	1/1:2,13:15:39.12:483,39,0	1/1:0,24:24:69.19:840,69,0	1/1:0,21:21:45.14:562,45,0	1/1:0,13:13:39.12:483,39,0	1/1:1,22:23:66.21:817,66,0	1/1:0,16:17:48.15:594,48,0	1/1:1,18:19:45.14:558,45,0	1/1:0,13:13:39.12:483,39,0	1/1:0,15:15:33.08:409,33,0	1/1:0,14:14:36.07:429,36,0	1/1:0,15:15:42.13:521,42,0	1/1:2,26:28:66.19:808,66,0	1/1:0,25:25:72.23:892,72,0	1/1:0,16:16:42.13:525,42,0	1/1:2,14:16:42.10:504,42,0	1/1:1,12:13:36.11:446,36,0	1/1:0,23:23:66.21:818,66,0	1/1:5,31:36:87.27:1083,87,0	1/1:0,27:27:78.25:966,78,0	1/1:0,13:13:39.12:483,39,0
chr10	26265328	.	A	AT	15650.74	PASS	AC=52;AF=0.963;AN=54;BaseQRankSum=-1.520;DP=421;FS=3.688;HRun=1;HaplotypeScore=248.5324;InbreedingCoeff=0.5694;MQ=31.05;MQ0=0;MQRankSum=-1.732;QD=37.26;ReadPosRankSum=-0.241;VQSLOD=3.9820;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,5:7:15.05:224,15,0	1/1:1,14:15:42.14:627,42,0	0/0:1,0:1:3.01:0,3,35	./.	1/1:4,22:25:42.10:602,42,0	1/1:3,13:16:39.13:577,39,0	1/1:4,4:7:15:184,15,0	1/1:5,16:19:57.19:839,57,0	1/1:1,22:23:63.18:918,63,0	1/1:3,27:30:81.27:1211,81,0	1/1:1,18:19:54.18:804,54,0	1/1:1,10:11:30.10:449,30,0	1/1:2,19:21:60.16:872,60,0	1/1:0,19:19:57.15:827,57,0	1/1:2,14:16:42.14:628,42,0	1/1:1,19:20:60.17:873,60,0	1/1:2,3:5:11.91:148,12,0	1/1:0,3:3:9.03:135,9,0	1/1:3,9:11:24.05:336,24,0	1/1:2,22:24:66.18:962,66,0	1/1:1,3:3:3.01:45,3,0	1/1:3,10:13:33.03:442,33,0	1/1:5,14:17:39.05:530,39,0	1/1:0,8:8:18.06:268,18,0	1/1:2,19:21:57.19:849,57,0	1/1:2,18:20:51.17:763,51,0	1/1:5,28:33:90.18:1270,90,0	1/1:0,6:6:18.06:268,18,0
chr10	26265342	.	TA	T	6079.19	PASS	AB=0.969;AC=50;AF=0.926;AN=54;BaseQRankSum=0.816;DP=408;FS=4.999;HRun=1;HaplotypeScore=263.5559;InbreedingCoeff=-0.0029;MQ=31.73;MQ0=0;MQRankSum=1.835;QD=14.90;ReadPosRankSum=5.645;VQSLOD=4.8135;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:4,0:4:8.09:28,0,8	1/1:18,0:18:32.05:272,32,0	1/1:1,0:1:1.25:3,1,0	./.	1/1:21,2:22:23.71:165,24,0	1/1:12,1:13:32.46:224,32,0	0/1:6,1:6:5.17:68,0,5	0/1:22,0:20:5.63:197,0,6	1/1:23,0:23:24.01:316,24,0	1/1:22,2:24:26.19:332,26,0	1/1:14,4:18:44.53:355,45,0	1/1:11,0:11:32.30:195,32,0	1/1:20,1:21:58.78:373,59,0	1/1:18,0:18:29.17:265,29,0	1/1:18,0:18:32.11:274,32,0	1/1:23,0:23:44.78:363,45,0	0/1:5,0:5:2.18:60,0,2	1/1:2,0:2:5.83:33,6,0	1/1:11,0:10:5.34:96,5,0	1/1:22,3:25:50.14:374,50,0	1/1:2,0:2:2.96:19,3,0	1/1:8,5:13:29.77:263,30,0	1/1:15,4:17:47.48:360,47,0	1/1:10,0:10:0.64:72,1,0	1/1:20,3:23:41.16:377,41,0	1/1:14,5:19:53.21:395,53,0	1/1:26,0:26:70:407,70,0	1/1:7,2:9:26.47:192,26,0
chr10	26265343	.	AC	A	11807.87	PASS	AC=54;AF=1.000;AN=54;DP=432;FS=0.000;HRun=4;HaplotypeScore=252.0783;InbreedingCoeff=0.2285;MQ=34.11;MQ0=0;QD=27.33;VQSLOD=2.8946;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,2:4:6.02:72,6,0	1/1:1,16:17:48.15:575,48,0	1/1:1,0:1:1.25:3,1,0	./.	1/1:10,18:27:27.08:322,27,0	1/1:2,10:12:33.09:388,33,0	1/1:2,4:5:12.04:144,12,0	1/1:3,17:18:48.15:576,48,0	1/1:1,21:22:57.17:683,57,0	1/1:7,20:27:69.17:807,69,0	1/1:11,12:23:45.11:519,45,0	1/1:1,11:12:33.10:395,33,0	1/1:4,19:23:60.18:717,60,0	1/1:5,15:20:45.14:538,45,0	1/1:1,17:18:48.15:575,48,0	1/1:1,22:23:63.19:754,63,0	1/1:0,5:5:12.04:144,12,0	1/1:0,2:2:6.02:72,6,0	1/1:1,10:10:21.06:252,21,0	1/1:11,18:29:54.11:612,54,0	1/1:0,2:2:3.01:36,3,0	1/1:9,6:15:30.09:352,30,0	1/1:7,15:20:48.14:565,48,0	1/1:1,9:10:15.04:179,15,0	1/1:7,15:22:57.17:681,57,0	1/1:8,14:22:54.16:643,54,0	1/1:2,25:27:75.21:885,75,0	1/1:2,7:9:27.08:321,27,0
chr10	26265363	.	G	GT	19175.59	PASS	AC=52;AF=1.000;AN=52;DP=484;FS=0.000;HRun=1;HaplotypeScore=217.2345;InbreedingCoeff=-0.0058;MQ=39.92;MQ0=1;QD=40.03;VQSLOD=4.0335;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,5:5:12.04:180,12,0	1/1:1,16:17:48.16:718,48,0	./.	./.	1/1:2,27:28:81.26:1170,81,0	1/1:1,13:14:42.10:603,42,0	1/1:1,8:9:24.04:334,24,0	1/1:4,13:17:48.10:655,48,0	1/1:1,25:26:72.24:1076,72,0	1/1:1,25:26:75.25:1123,75,0	1/1:5,25:30:72.24:1075,72,0	1/1:3,11:14:33.08:469,33,0	1/1:3,19:22:63.21:941,63,0	1/1:3,17:20:57.19:842,57,0	1/1:0,17:17:51.17:762,51,0	1/1:1,24:25:72.20:1051,72,0	1/1:0,7:7:21.07:314,21,0	1/1:0,3:3:9.03:135,9,0	1/1:3,8:10:27.06:366,27,0	1/1:3,32:35:99:1481,99,0	1/1:1,3:4:9.03:133,9,0	1/1:3,15:18:45.15:659,45,0	1/1:4,25:27:78.22:1140,78,0	1/1:1,11:12:27.05:379,27,0	1/1:3,17:20:51.13:738,51,0	1/1:2,24:26:69.23:1026,69,0	1/1:5,26:31:87.26:1267,87,0	1/1:0,12:12:36.12:539,36,0
chr10	26266012	.	T	TCA	551.55	PASS	AC=20;AF=0.769;AN=26;BaseQRankSum=1.307;DP=130;FS=2.602;HRun=0;HaplotypeScore=70.2702;InbreedingCoeff=0.5009;MQ=37.48;MQ0=0;MQRankSum=0.485;QD=7.77;ReadPosRankSum=-0.379;VQSLOD=2.9869;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:1,0:1:2.22:0,2,7	./.	1/1:6,12:18:5.99:50,6,0	1/1:12,0:12:3.01:50,3,0	1/1:6,0:6:6.01:75,6,0	0/0:18,0:18:28.42:0,28,325	./.	1/1:6,0:6:14.45:85,14,0	./.	1/1:3,0:3:5.99:50,6,0	./.	./.	1/1:3,0:3:3:25,3,0	./.	0/0:1,0:1:2.94:0,3,18	./.	1/1:5,0:5:14.94:118,15,0	./.	./.	./.	1/1:5,0:5:3:25,3,0	./.	./.	1/1:7,0:7:20.77:140,21,0	./.	1/1:6,0:6:5.92:39,6,0
chr10	26266612	.	C	CT	4255.75	PASS	AB=0.923;AC=53;AF=0.981;AN=54;BaseQRankSum=-2.364;DP=245;FS=31.355;HRun=1;HaplotypeScore=102.8467;InbreedingCoeff=-0.0409;MQ=67.96;MQ0=0;MQRankSum=-3.960;QD=17.37;ReadPosRankSum=2.702;VQSLOD=3.5081;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,3:3:5.91:38,6,0	1/1:1,4:5:12.32:81,12,0	1/1:4,5:10:13.52:227,14,0	0/1:10,1:10:67.33:69,0,67	1/1:0,15:15:29:162,29,0	1/1:2,10:12:13.73:158,14,0	1/1:2,7:9:14.88:121,15,0	1/1:5,6:11:26.82:199,27,0	1/1:1,12:13:38.36:267,38,0	1/1:3,8:11:26.89:208,27,0	1/1:0,6:6:17.69:112,18,0	1/1:1,7:8:20.62:131,21,0	1/1:1,6:7:14.81:100,15,0	1/1:0,5:5:14.05:76,14,0	1/1:1,17:18:53.08:344,53,0	1/1:0,4:4:11.81:75,12,0	./.	1/1:1,3:4:8.98:74,9,0	1/1:3,8:11:32.92:303,33,0	1/1:0,16:16:41.53:313,42,0	1/1:0,3:3:8.95:68,9,0	1/1:0,5:5:14.78:98,15,0	1/1:1,11:12:29.46:185,29,0	1/1:0,2:2:6.02:75,6,0	1/1:2,8:10:17.72:113,18,0	1/1:0,12:12:35.82:310,36,0	1/1:1,16:16:40.49:283,40,0	1/1:1,3:4:8.93:65,9,0
chr10	26266617	.	AT	A	4491.20	PASS	AB=0.714;AC=52;AF=0.963;AN=54;BaseQRankSum=-3.709;DP=263;FS=21.908;HRun=2;HaplotypeScore=99.9423;InbreedingCoeff=-0.0585;MQ=70.23;MQ0=0;MQRankSum=-3.722;QD=17.08;ReadPosRankSum=1.516;VQSLOD=3.7076;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,3:5:8.73:69,9,0	1/1:3,4:7:10.97:51,11,0	0/1:3,9:12:23.92:272,0,24	0/1:10,2:10:70.59:99,0,71	1/1:0,16:16:38.83:249,39,0	1/1:3,12:15:43.29:299,43,0	1/1:1,8:9:20.55:193,21,0	1/1:0,10:10:29.64:258,30,0	1/1:1,13:14:37.10:225,37,0	1/1:1,10:11:32.40:240,32,0	1/1:0,6:6:16.39:72,16,0	1/1:1,8:9:25.67:168,26,0	1/1:2,8:10:19.93:105,20,0	1/1:0,5:5:11.52:46,12,0	1/1:1,18:19:53.92:302,54,0	1/1:0,4:4:11.14:51,11,0	./.	1/1:1,3:4:11.85:94,12,0	1/1:2,9:11:29.48:238,29,0	1/1:3,14:17:45.49:290,45,0	1/1:0,3:3:8.55:45,9,0	1/1:0,5:5:13.83:63,14,0	1/1:0,12:12:30.50:161,30,0	1/1:0,2:2:3.01:33,3,0	1/1:0,10:10:28.77:233,29,0	1/1:0,11:11:32.54:277,33,0	1/1:2,17:19:45.55:286,46,0	1/1:2,3:5:11.67:71,12,0
chr10	26266624	.	CT	C	3787.82	PASS	AB=0.958;AC=48;AF=0.889;AN=54;BaseQRankSum=0.366;DP=288;FS=9.919;HRun=1;HaplotypeScore=108.1508;InbreedingCoeff=0.1205;MQ=72.43;MQ0=0;MQRankSum=-1.653;QD=13.67;ReadPosRankSum=4.974;VQSLOD=2.1877;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,0:6:8.84:56,9,0	1/1:8,0:8:20.41:120,20,0	0/1:11,3:15:43.75:44,0,206	0/0:9,2:10:2.43:0,2,135	1/1:19,0:19:47.15:307,47,0	1/1:16,0:16:46.82:289,47,0	1/1:10,0:10:26.19:156,26,0	1/1:14,0:14:36.49:190,36,0	1/1:14,0:14:40.87:249,41,0	1/1:13,0:13:33.60:175,34,0	1/1:7,0:7:14.79:97,15,0	1/1:10,0:10:7.49:125,7,0	1/1:9,0:9:20.65:131,21,0	1/1:6,0:6:17.68:111,18,0	0/1:20,0:20:0.64:256,0,1	1/1:4,0:4:11.80:75,12,0	./.	0/1:3,0:3:11.09:28,0,11	1/1:11,0:11:30.71:154,31,0	1/1:18,0:18:46.14:266,46,0	1/1:3,0:3:5.86:35,6,0	1/1:7,0:7:17.46:107,17,0	1/1:13,0:13:35.27:224,35,0	1/1:2,0:2:2.74:12,3,0	1/1:10,0:10:29.53:190,30,0	1/1:15,0:15:14.67:132,15,0	0/1:19,0:19:11.24:176,0,11	1/1:5,0:5:14.50:84,14,0
chr10	26266625	.	TC	T	8781.50	PASS	AB=0.840;AC=52;AF=0.963;AN=54;BaseQRankSum=-2.160;DP=287;FS=43.694;HRun=3;HaplotypeScore=89.4530;InbreedingCoeff=-0.0591;MQ=74.10;MQ0=0;MQRankSum=-4.194;QD=30.60;ReadPosRankSum=2.080;VQSLOD=1.9383;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,6:6:9.03:111,9,0	1/1:1,7:8:21.07:260,21,0	0/1:11,3:14:88.59:208,0,89	0/1:10,2:11:93.57:94,0,103	1/1:0,19:19:48.15:594,48,0	1/1:0,16:16:48.15:594,48,0	1/1:1,9:10:27.08:331,27,0	1/1:0,14:14:42.11:506,42,0	1/1:0,14:14:42.13:520,42,0	1/1:0,13:13:39.11:472,39,0	1/1:0,7:7:15.05:186,15,0	1/1:2,8:10:24.07:294,24,0	1/1:0,9:9:21.07:260,21,0	1/1:0,6:6:18.06:222,18,0	1/1:1,18:19:48.15:594,48,0	1/1:0,4:4:12.04:149,12,0	./.	1/1:1,2:3:6.02:74,6,0	1/1:0,11:11:33.10:409,33,0	1/1:0,18:18:48.15:594,48,0	1/1:1,2:3:6.02:74,6,0	1/1:1,6:7:18.06:223,18,0	1/1:0,13:13:36.11:445,36,0	1/1:0,2:2:3.01:37,3,0	1/1:1,10:11:33.08:394,33,0	1/1:0,14:14:39.08:469,39,0	1/1:2,17:19:39.12:483,39,0	1/1:0,5:5:15.05:186,15,0
chr10	26267790	.	A	ACTT	35760.04	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-8.174;DP=752;FS=4.243;HRun=0;HaplotypeScore=89.2401;InbreedingCoeff=0.9471;MQ=59.12;MQ0=1;MQRankSum=-3.801;QD=50.58;ReadPosRankSum=5.732;VQSLOD=7.2675;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,32:35:81.28:1765,81,0	1/1:2,12:14:33.11:728,33,0	0/0:23,0:23:57.16:0,57,871	0/0:21,0:17:42.14:0,42,674	1/1:3,32:37:81.15:1648,81,0	1/1:5,33:39:87.30:1918,87,0	1/1:4,9:13:24.08:530,24,0	1/1:9,21:30:63.19:1295,63,0	1/1:3,19:24:51.18:1120,51,0	1/1:11,29:41:96.31:2044,96,0	1/1:6,23:30:69.19:1474,69,0	1/1:5,18:22:54.19:1190,54,0	1/1:4,32:37:87.30:1918,87,0	1/1:3,26:28:66.23:1455,66,0	1/1:1,26:26:75.26:1654,75,0	1/1:4,28:32:87.30:1867,87,0	1/1:1,26:28:63.22:1390,63,0	1/1:3,18:22:54.19:1173,54,0	1/1:2,13:14:33.11:728,33,0	1/1:3,35:37:99:2242,102,0	1/1:3,21:24:57.15:1197,57,0	1/1:4,21:26:66.14:1332,66,0	1/1:1,31:34:78:1721,78,0	1/1:4,10:14:30:597,30,0	1/1:4,19:23:54.14:1145,54,0	1/1:2,26:27:78.27:1698,78,0	1/1:6,28:35:84.15:1800,84,0	1/1:2,4:6:6.02:132,6,0
chr10	26269841	.	TA	T	1577.05	PASS	AB=0.885;AC=8;AF=0.143;AN=56;BaseQRankSum=4.103;DP=540;FS=7.002;HRun=10;HaplotypeScore=60.0926;InbreedingCoeff=0.6675;MQ=44.21;MQ0=5;MQRankSum=-0.157;QD=13.36;ReadPosRankSum=-2.236;VQSLOD=2.8014;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,2:27:17.09:0,17,628	0/0:9,0:9:20.98:0,21,206	0/0:18,0:7:3.57:0,4,41	0/0:14,0:8:12.03:0,12,130	0/0:32,0:30:63.09:0,63,665	0/0:17,0:17:48.06:0,48,515	0/0:10,0:10:18.05:0,18,199	1/1:5,24:29:71.95:621,72,0	0/0:17,0:17:44.97:0,45,448	0/0:26,0:25:66.18:0,66,730	0/0:18,1:19:42.07:0,42,446	0/1:15,2:17:0.93:1,0,446	0/0:15,0:14:36.02:0,36,371	0/0:15,1:16:10.01:0,10,324	1/1:4,16:18:41.94:357,42,0	0/0:17,0:16:42.11:0,42,464	1/1:4,34:37:83.98:729,84,0	0/0:17,0:17:45.10:0,45,488	0/0:25,0:22:54.11:0,54,578	0/0:22,1:23:31.07:0,31,557	0/0:9,0:9:24.05:0,24,258	0/0:2,0:2:3.01:0,3,33	0/0:12,0:12:30.08:0,30,330	0/1:12,2:14:16.02:16,0,288	0/0:28,0:27:54.01:0,54,568	0/0:21,0:21:42.11:0,42,465	0/0:32,0:32:81.22:0,81,896	0/0:16,0:15:39.02:0,39,415
chr10	26272217	.	GA	G	6333.48	PASS	AB=0.649;AC=48;AF=0.857;AN=56;BaseQRankSum=-0.383;DP=481;FS=2.785;HRun=12;HaplotypeScore=60.0799;InbreedingCoeff=0.1671;MQ=74.00;MQ0=2;MQRankSum=0.429;QD=13.86;ReadPosRankSum=3.903;VQSLOD=5.3939;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,23:28:36.79:418,37,0	1/1:1,4:6:11:76,11,0	0/1:27,1:18:14.57:15,0,69	0/0:21,1:16:20.39:0,20,174	1/1:4,22:26:35.30:457,35,0	0/1:4,9:13:28:176,0,28	0/1:2,6:8:31.28:115,0,31	1/1:6,0:25:35.33:102,35,0	1/1:1,9:10:26.90:209,27,0	1/1:5,20:25:61.80:470,62,0	1/1:4,10:14:26.84:209,27,0	1/1:1,6:7:14.94:116,15,0	1/1:3,12:15:29.78:232,30,0	0/1:4,9:13:0.56:179,0,1	1/1:4,0:15:22.39:65,22,0	1/1:4,11:15:29.88:232,30,0	1/1:2,0:17:26.47:78,26,0	1/1:3,13:16:8.41:247,8,0	1/1:4,11:15:35.85:279,36,0	1/1:5,18:24:58.80:447,59,0	1/1:2,6:8:17.91:139,18,0	0/1:6,8:14:4.64:118,0,5	1/1:3,17:20:26.05:347,26,0	1/1:0,4:4:8.97:70,9,0	1/1:0,16:16:41.82:325,42,0	0/1:3,18:21:4.10:338,0,4	1/1:7,28:38:83.80:621,84,0	1/1:2,13:15:32.87:255,33,0
chr10	26272683	.	GA	G	8268.98	PASS	AB=0.679;AC=47;AF=0.839;AN=56;BaseQRankSum=-7.339;DP=573;FS=8.366;HRun=11;HaplotypeScore=69.0708;InbreedingCoeff=0.5879;MQ=66.61;MQ0=0;MQRankSum=1.546;QD=16.67;ReadPosRankSum=3.645;VQSLOD=5.5508;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,41:41:99:861,105,0	1/1:2,6:8:17.98:148,18,0	0/1:18,1:8:21.58:22,0,51	0/0:20,0:12:6.25:0,6,75	1/1:3,22:26:67.89:540,68,0	1/1:1,19:20:15.72:337,16,0	1/1:4,20:24:15.96:337,16,0	0/0:11,0:23:28.31:0,28,150	1/1:1,15:16:35.96:296,36,0	1/1:6,24:30:62.88:514,63,0	1/1:5,16:22:40.58:322,41,0	1/1:0,14:14:35.96:296,36,0	1/1:3,12:15:29.96:246,30,0	1/1:3,11:14:23.97:197,24,0	1/1:1,9:12:25.05:184,25,0	1/1:0,15:15:32.96:271,33,0	0/0:7,0:34:54.29:0,54,298	0/1:5,20:26:8.22:340,0,8	1/1:2,15:18:35.59:361,36,0	1/1:4,26:30:66.72:538,67,0	1/1:4,12:16:12.20:226,12,0	1/1:6,15:21:12.95:312,13,0	0/1:7,20:27:5.24:365,0,5	1/1:2,21:23:53.93:443,54,0	1/1:0,16:16:41.95:345,42,0	1/1:1,13:14:40.77:325,41,0	1/1:3,15:18:29.88:246,30,0	1/1:1,9:10:23.97:197,24,0
chr10	26273669	.	ATG	A	1069.18	PASS	AB=0.730;AC=29;AF=0.580;AN=50;BaseQRankSum=2.885;DP=397;FS=3.492;HRun=0;HaplotypeScore=91.8700;InbreedingCoeff=0.3401;MQ=53.38;MQ0=4;MQRankSum=-2.724;QD=4.13;ReadPosRankSum=0.705;VQSLOD=2.5049;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:9,5:14:0:0,0,0	0/1:4,4:8:0.21:1,0,0	0/0:23,0:11:3.48:0,3,34	0/0:25,0:10:8.91:0,9,64	0/1:10,4:14:11.86:12,0,22	0/0:8,9:17:0:0,0,0	0/1:9,9:18:14.13:40,0,14	1/1:13,0:20:19.96:111,20,0	0/0:5,5:10:2.98:0,3,21	1/1:12,13:25:19.98:301,20,0	1/1:4,12:16:2.24:7,2,0	./.	1/1:8,8:16:1.96:7,2,0	1/1:6,6:12:2.80:34,3,0	0/0:11,2:13:8.96:0,9,70	0/1:5,8:12:0:0,0,1	0/1:4,0:4:0:0,0,0	./.	1/1:9,0:8:8.69:47,9,0	1/1:10,6:16:8.21:74,8,0	0/0:5,2:7:1.82:0,2,5	./.	1/1:10,1:11:2.83:20,3,0	0/1:5,7:12:3.50:3,0,32	0/1:14,7:21:1.58:15,0,2	1/1:9,14:23:15.81:303,16,0	1/1:9,4:13:11.35:115,11,0	1/1:3,5:8:11.90:111,12,0
chr10	26273690	.	T	TGC	2185.02	PASS	AB=0.992;AC=35;AF=0.625;AN=56;BaseQRankSum=-2.849;DP=319;FS=16.848;HRun=0;HaplotypeScore=77.0298;InbreedingCoeff=0.3044;MQ=42.47;MQ0=4;MQRankSum=1.730;QD=9.30;ReadPosRankSum=3.867;VQSLOD=2.0082;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:2.66:0,3,14	0/1:8,0:8:0:0,0,0	0/0:13,0:5:3.48:0,3,33	0/0:17,0:5:4.85:0,5,58	0/1:12,0:13:6.86:79,0,7	0/1:14,0:14:0:0,0,0	0/1:15,0:15:2.88:139,0,3	0/1:8,0:8:15.39:15,0,18	0/0:11,0:11:2.87:0,3,15	1/1:16,0:16:22.92:391,23,0	1/1:14,0:14:3.01:58,3,0	0/1:11,0:11:0:0,0,0	1/1:11,0:11:2.96:57,3,0	1/1:9,0:9:3.01:36,3,0	0/0:12,0:12:11.64:0,12,95	0/1:11,0:10:0:1,0,0	0/1:3,0:3:0:0,0,0	1/1:5,0:5:5.95:54,6,0	1/1:3,3:5:2.06:140,2,0	1/1:20,1:21:6.81:140,7,0	1/1:7,0:7:3.01:45,3,0	0/0:15,0:15:5.47:0,5,24	1/1:5,0:5:3.01:45,3,0	0/1:10,0:10:9.87:51,0,10	1/1:17,0:17:9.03:137,9,0	1/1:19,0:19:37.94:634,38,0	1/1:6,0:6:14.75:126,15,0	1/1:6,0:6:14.87:178,15,0
chr10	26274182	.	C	CT	428.13	PASS	AB=0.960;AC=8;AF=0.143;AN=56;BaseQRankSum=-5.119;DP=413;FS=16.172;HRun=10;HaplotypeScore=42.7912;InbreedingCoeff=0.4664;MQ=65.14;MQ0=1;MQRankSum=0.441;QD=6.80;ReadPosRankSum=-2.695;VQSLOD=-0.2928;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:26.55:0,27,221	0/0:8,0:8:20.97:0,21,172	0/0:5,0:5:2.29:0,2,23	0/1:4,0:3:0:0,0,0	0/0:36,0:37:85.88:0,86,692	0/0:14,0:15:40.99:0,41,326	0/0:8,0:8:23.97:0,24,197	1/1:6,17:23:42.09:440,42,0	0/0:12,0:12:26.93:0,27,222	0/0:16,1:17:12.96:0,13,313	0/0:28,0:30:76.92:0,77,621	0/0:13,0:14:40.99:0,41,326	0/0:10,0:11:28.99:0,29,225	0/0:9,0:9:23.97:0,24,197	0/1:11,1:12:5.03:5,0,170	0/0:17,0:17:47.94:0,48,394	1/1:1,3:4:9.02:96,9,0	0/0:9,0:10:19.97:0,20,148	0/1:9,0:9:5.44:5,0,127	0/0:26,0:26:59.90:0,60,492	0/0:5,0:5:5.98:0,6,49	0/0:16,0:16:38.93:0,39,320	0/0:19,0:19:47.93:0,48,391	0/1:10,1:11:5.02:5,0,170	0/0:13,0:14:40.98:0,41,324	0/0:26,0:27:51.23:0,51,422	0/0:33,1:35:62.94:0,63,713	0/0:3,0:3:2.98:0,3,25
chr10	26274866	.	CA	C	8172.32	PASS	AB=1.000;AC=47;AF=0.870;AN=54;BaseQRankSum=8.699;DP=413;FS=0.000;HRun=8;HaplotypeScore=41.7560;InbreedingCoeff=0.7475;MQ=70.55;MQ0=5;MQRankSum=-0.635;QD=22.64;ReadPosRankSum=5.103;VQSLOD=4.4587;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,11:12:30.05:289,30,0	1/1:0,10:10:30.05:290,30,0	0/1:6,0:6:4.97:5,0,28	0/0:3,1:4:4.37:0,4,35	1/1:4,26:27:75.12:724,75,0	1/1:2,16:18:42.06:405,42,0	1/1:0,6:6:12.02:116,12,0	0/0:33,0:33:93.25:0,93,1087	1/1:0,18:17:45.07:435,45,0	1/1:4,26:30:72.10:695,72,0	1/1:3,19:21:48.07:463,48,0	1/1:2,10:12:27.04:261,27,0	1/1:3,12:15:21.42:304,21,0	1/1:0,12:12:27.04:261,27,0	1/1:1,12:13:36.06:347,36,0	1/1:0,15:15:39.06:377,39,0	0/0:15,0:15:45.14:0,45,539	1/1:0,10:10:24.04:232,24,0	1/1:1,7:8:21.03:203,21,0	1/1:2,20:21:48.06:462,48,0	1/1:0,2:2:3:29,3,0	1/1:1,2:3:6.01:58,6,0	1/1:2,9:11:24.04:232,24,0	./.	1/1:3,13:16:36.06:348,36,0	1/1:0,17:16:48.04:450,48,0	1/1:1,32:32:90.15:869,90,0	1/1:5,13:18:33.05:318,33,0
chr10	26275653	.	C	CAA	19185.99	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-6.562;DP=540;FS=13.017;HRun=7;HaplotypeScore=54.7029;InbreedingCoeff=0.9615;MQ=82.44;MQ0=4;MQRankSum=-7.900;QD=37.62;ReadPosRankSum=4.153;VQSLOD=3.3195;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,14:18:36.12:590,36,0	1/1:0,3:3:9.03:148,9,0	0/0:18,0:18:33:0,33,421	0/0:12,0:12:27.01:0,27,291	1/1:2,23:25:66.22:1073,66,0	1/1:2,23:24:63.22:1034,63,0	1/1:2,14:16:39.13:640,39,0	1/1:4,0:29:66.83:276,67,0	1/1:2,14:16:33.11:541,33,0	1/1:1,24:24:72.25:1179,72,0	1/1:2,20:22:54.18:886,54,0	1/1:1,13:14:39.13:640,39,0	1/1:0,8:7:18.06:295,18,0	1/1:0,14:14:33.11:542,33,0	1/1:2,20:22:57.19:936,57,0	1/1:5,6:12:18.06:295,18,0	1/1:1,0:15:33.33:116,33,0	1/1:3,16:19:51.09:778,51,0	1/1:4,27:32:87.26:1378,87,0	1/1:4,17:21:51.14:808,51,0	1/1:3,24:29:65.71:1043,66,0	1/1:1,17:18:51.17:837,51,0	1/1:2,23:26:72.24:1152,72,0	1/1:2,12:14:30.10:492,30,0	1/1:0,18:20:48.16:787,48,0	1/1:1,20:21:60.19:961,60,0	1/1:3,26:28:72.24:1165,72,0	1/1:3,13:16:36.12:591,36,0
chr10	26277998	.	GA	G	1061.52	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.580;DP=420;FS=3.253;HRun=7;HaplotypeScore=41.3462;InbreedingCoeff=0.9405;MQ=81.44;MQ0=0;MQRankSum=-2.985;QD=23.59;ReadPosRankSum=-1.361;VQSLOD=2.9131;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:87.28:0,87,1092	0/0:11,0:11:33.11:0,33,413	0/0:17,0:17:38.91:0,39,496	0/0:7,0:7:8.99:0,9,82	0/0:19,0:19:51.15:0,51,624	0/0:16,0:16:45.14:0,45,566	0/0:13,0:13:39.12:0,39,489	1/1:3,21:24:63.14:642,63,0	0/0:7,0:7:21.06:0,21,252	0/0:18,0:18:54.17:0,54,679	0/0:23,0:23:69.21:0,69,856	0/0:14,0:14:42.13:0,42,528	0/0:6,0:6:18.04:0,18,211	0/0:9,0:9:24.08:0,24,302	0/0:13,0:13:30.10:0,30,377	0/0:17,0:17:48.13:0,48,578	1/1:4,17:21:54.55:541,55,0	0/0:14,0:14:33.11:0,33,413	0/0:13,0:13:36.11:0,36,448	0/0:19,0:19:51.16:0,51,630	0/0:11,0:11:30.10:0,30,377	0/0:13,0:13:39.12:0,39,491	0/0:14,0:14:42.13:0,42,528	0/0:5,0:5:15.05:0,15,189	0/0:13,0:13:36.09:0,36,438	0/0:22,0:22:63.20:0,63,783	0/0:26,0:26:78.24:0,78,964	0/0:6,0:6:12:0,12,133
chr10	26279292	.	A	AC	7269.60	PASS	AB=1.000;AC=51;AF=0.911;AN=56;BaseQRankSum=1.599;DP=388;FS=9.652;HRun=4;HaplotypeScore=126.3052;InbreedingCoeff=0.7519;MQ=71.32;MQ0=0;MQRankSum=-4.235;QD=19.92;ReadPosRankSum=1.495;VQSLOD=3.4798;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,12:21:42.58:501,43,0	1/1:2,4:6:18.04:211,18,0	0/0:12,0:12:28.89:0,29,213	0/1:10,0:9:0.86:1,0,55	1/1:9,7:16:10.22:282,10,0	1/1:3,12:15:27.08:332,27,0	1/1:4,12:16:21.07:256,21,0	1/1:19,0:19:31.55:121,32,0	1/1:5,10:15:36.10:439,36,0	1/1:15,8:23:21.37:425,21,0	1/1:4,7:11:33.04:367,33,0	1/1:3,4:7:20.90:211,21,0	1/1:1,11:12:30.09:371,30,0	1/1:5,16:21:33.05:412,33,0	0/0:11,0:11:25.51:0,26,136	1/1:2,3:5:6.02:74,6,0	1/1:12,0:12:27.50:135,27,0	1/1:7,2:9:16.79:132,17,0	1/1:11,7:18:33.03:365,33,0	1/1:7,7:14:24.05:272,24,0	1/1:8,4:12:15.03:174,15,0	1/1:7,5:12:28.53:281,29,0	1/1:7,12:19:37.32:469,37,0	1/1:1,11:12:23.94:299,24,0	1/1:9,6:15:30.50:342,30,0	1/1:5,7:12:24.07:294,24,0	1/1:3,17:20:28.87:335,29,0	1/1:8,5:13:1.22:169,1,0
chr10	26279296	.	CG	C	2746.45	PASS	AB=0.977;AC=48;AF=0.857;AN=56;BaseQRankSum=4.821;DP=343;FS=18.432;HRun=2;HaplotypeScore=136.6003;InbreedingCoeff=0.3459;MQ=73.10;MQ0=0;MQRankSum=-2.301;QD=8.56;ReadPosRankSum=2.561;VQSLOD=0.0264;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:17:36.88:153,37,0	1/1:6,0:6:13.52:48,14,0	0/0:11,0:11:3.98:0,4,202	0/1:9,1:9:23.19:23,0,135	0/1:15,0:15:0.25:58,0,0	1/1:12,0:12:15.24:73,15,0	1/1:14,0:14:13.84:52,14,0	1/1:0,13:13:39.10:486,39,0	1/1:14,0:14:30.18:127,30,0	1/1:18,0:19:25.61:178,26,0	1/1:11,0:11:21.97:94,22,0	1/1:8,0:8:22.12:110,22,0	1/1:11,0:11:23.54:94,24,0	1/1:18,0:19:24.08:88,24,0	0/0:11,0:11:8.39:0,8,109	1/1:3,0:3:5.60:25,6,0	1/1:2,9:11:33.01:388,33,0	0/1:9,0:9:2.16:65,0,2	1/1:15,0:15:17.76:116,18,0	1/1:10,0:12:8.48:35,8,0	1/1:7,0:8:10.16:43,10,0	1/1:12,0:12:15.53:106,16,0	1/1:17,0:17:15.72:86,16,0	1/1:11,0:11:20.33:88,20,0	1/1:13,0:13:21.93:79,22,0	1/1:11,0:11:21.63:96,22,0	1/1:19,0:19:28.99:138,29,0	0/1:11,0:11:25.53:26,0,26
chr10	26279436	.	T	TG	20182.84	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-7.210;DP=502;FS=3.984;HRun=0;HaplotypeScore=50.5189;InbreedingCoeff=0.9889;MQ=69.20;MQ0=0;MQRankSum=-7.404;QD=42.58;ReadPosRankSum=4.727;VQSLOD=5.1710;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,33:35:99:1574,102,0	1/1:0,8:8:24.08:375,24,0	0/0:13,0:13:32.01:0,32,382	0/0:15,0:13:36.03:0,36,449	1/1:0,23:23:69.23:1064,69,0	1/1:0,14:14:42.14:657,42,0	1/1:0,18:18:48.16:751,48,0	1/1:0,16:16:45.15:703,45,0	1/1:1,20:21:57.19:890,57,0	1/1:0,20:20:60.18:903,60,0	1/1:0,23:23:66.14:1002,66,0	1/1:0,10:10:27.09:422,27,0	1/1:0,16:16:45.15:703,45,0	1/1:1,17:18:48.16:748,48,0	1/1:0,10:10:27.09:422,27,0	1/1:0,5:5:15.05:235,15,0	1/1:0,27:27:69.23:1079,69,0	1/1:0,24:24:57.19:891,57,0	1/1:0,26:25:75.25:1151,75,0	1/1:1,20:21:57.11:860,57,0	1/1:1,21:22:51.09:766,51,0	1/1:0,15:15:45.15:703,45,0	1/1:0,24:24:62.95:984,63,0	1/1:0,11:11:33.11:516,33,0	1/1:2,23:25:63.20:964,63,0	1/1:1,17:18:51.17:797,51,0	1/1:2,12:15:39.13:602,39,0	1/1:0,9:9:27.09:422,27,0
chr10	26280614	.	T	TCTTA	2799.64	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=4.093;DP=485;FS=7.390;HRun=0;HaplotypeScore=79.7085;InbreedingCoeff=0.9882;MQ=89.23;MQ0=0;MQRankSum=-5.298;QD=60.86;ReadPosRankSum=-1.451;VQSLOD=4.7807;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:48.16:0,48,910	0/0:9,0:9:24.08:0,24,438	0/0:20,0:20:39.55:0,40,831	0/0:18,0:18:54.12:0,54,898	0/0:20,0:20:54.19:0,54,1014	0/0:27,0:27:78.24:0,78,1415	0/0:16,0:16:45.12:0,45,777	1/1:9,19:28:69.24:1707,69,0	0/0:14,0:14:42.14:0,42,771	0/0:21,0:21:63.22:0,63,1189	0/0:22,0:22:60.21:0,60,1133	0/0:10,0:10:30.10:0,30,562	0/0:14,0:14:39.12:0,39,699	0/0:23,0:23:66.22:0,66,1182	0/0:17,0:17:48.16:0,48,900	0/0:19,0:19:48.16:0,48,912	1/1:0,16:18:45.15:1214,45,0	0/0:5,0:5:15.05:0,15,285	0/0:21,0:21:63.20:0,63,1133	0/0:19,0:19:54.17:0,54,985	0/0:20,0:20:54.19:0,54,1014	0/0:16,0:16:42.13:0,42,753	0/0:13,0:13:36.12:0,36,647	0/0:12,0:12:33.10:0,33,570	0/0:15,0:15:36.11:0,36,629	0/0:24,0:24:72.23:0,72,1297	0/0:21,0:21:57.20:0,57,1067	0/0:7,0:7:21.07:0,21,399
chr10	26280741	.	T	TA	1362.82	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-2.034;DP=552;FS=5.995;HRun=3;HaplotypeScore=58.3709;InbreedingCoeff=0.9752;MQ=63.74;MQ0=1;MQRankSum=0.298;QD=34.07;ReadPosRankSum=-2.010;VQSLOD=3.3295;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:66.02:0,66,716	0/0:9,0:9:27.01:0,27,294	0/0:16,0:12:11.60:0,12,208	0/0:12,0:9:24.07:0,24,287	0/0:41,0:41:99:0,123,1329	0/0:19,0:19:57.17:0,57,672	0/0:15,0:15:42.12:0,42,493	1/1:0,20:20:60.03:734,60,0	0/0:21,0:21:57.12:0,57,647	0/0:45,0:45:99:0,129,1470	0/0:33,0:33:96.17:0,96,1082	0/0:14,0:14:39.12:0,39,467	0/0:11,0:11:30.06:0,30,336	0/0:21,0:21:57.13:0,57,640	0/0:22,0:22:63.14:0,63,708	0/0:23,0:23:69.18:0,69,797	1/1:1,19:20:57.09:751,57,0	0/0:13,0:13:36.01:0,36,398	0/0:12,0:12:33.08:0,33,368	0/0:28,0:28:84.21:0,84,964	0/0:6,0:6:18.06:0,18,215	0/0:10,0:10:27.07:0,27,313	0/0:9,0:9:24.01:0,24,268	0/0:20,0:20:54.06:0,54,608	0/0:21,0:21:57.17:0,57,672	0/0:30,0:30:90.14:0,90,1014	0/0:22,0:21:63.19:0,63,753	0/0:16,0:16:48.12:0,48,559
chr10	26282152	.	G	GA	703.43	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.284;DP=442;FS=3.914;HRun=0;HaplotypeScore=71.0358;InbreedingCoeff=0.9768;MQ=73.71;MQ0=0;MQRankSum=-7.097;QD=23.45;ReadPosRankSum=-1.820;VQSLOD=4.3541;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:54.18:0,54,755	0/0:14,0:14:42.14:0,42,586	0/0:9,0:9:24.08:0,24,324	0/0:6,0:6:15.05:0,15,206	0/0:30,0:30:87.29:0,87,1213	0/0:16,0:16:48.15:0,48,653	0/0:6,0:6:18.06:0,18,250	1/1:5,13:18:44.73:532,45,0	0/0:10,0:10:27.09:0,27,377	0/0:24,0:24:72.23:0,72,989	0/0:27,0:27:81.27:0,81,1130	0/0:6,0:6:18.06:0,18,251	0/0:11,0:11:30.10:0,30,418	0/0:11,0:11:33.11:0,33,461	0/0:19,0:19:57.19:0,57,796	0/0:18,0:18:54.18:0,54,755	1/1:2,10:12:32.82:293,33,0	0/0:24,0:24:66.22:0,66,921	0/0:17,0:17:51.16:0,51,696	0/0:29,0:29:84.28:0,84,1174	0/0:9,0:9:27.07:0,27,357	0/0:7,0:7:21.05:0,21,268	0/0:12,0:12:36.12:0,36,503	0/0:9,0:9:21.07:0,21,293	0/0:18,0:18:48.16:0,48,671	0/0:22,0:22:66.22:0,66,922	0/0:22,0:22:66.22:0,66,922	0/0:14,0:14:30.10:0,30,417
chr10	26282164	.	CA	C	861.28	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.596;DP=419;FS=5.183;HRun=1;HaplotypeScore=71.9909;InbreedingCoeff=0.9369;MQ=69.62;MQ0=0;MQRankSum=-8.505;QD=29.70;ReadPosRankSum=-0.837;VQSLOD=2.9918;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:51.15:0,51,786	0/0:10,0:10:30.10:0,30,477	0/0:7,0:7:18.05:0,18,265	0/0:4,0:4:9.03:0,9,144	0/0:28,0:28:84.29:0,84,1339	0/0:13,0:13:39.13:0,39,621	0/0:6,0:6:18.06:0,18,288	1/1:1,20:21:57.18:741,57,0	0/0:10,0:10:27.09:0,27,429	0/0:22,0:22:66.23:0,66,1056	0/0:28,0:28:84.29:0,84,1337	0/0:5,0:5:15.04:0,15,217	0/0:12,0:12:33.11:0,33,525	0/0:11,0:11:33.11:0,33,527	0/0:17,0:17:51.16:0,51,792	0/0:18,0:18:54.17:0,54,837	1/1:0,8:8:24.04:242,24,0	0/0:24,0:24:66.20:0,66,1029	0/0:20,0:20:60.20:0,60,958	0/0:30,0:30:90.31:0,90,1432	0/0:8,0:8:24.08:0,24,384	0/0:5,0:5:15.05:0,15,240	0/0:12,0:12:36.12:0,36,576	0/0:7,0:7:15.03:0,15,216	0/0:18,0:18:51.17:0,51,814	0/0:23,0:23:69.24:0,69,1103	0/0:21,0:21:63.19:0,63,961	0/0:11,0:11:27.09:0,27,428
chr10	26282178	.	CT	C	8418.89	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-0.638;DP=383;FS=5.464;HRun=9;HaplotypeScore=46.2447;InbreedingCoeff=0.6938;MQ=69.40;MQ0=0;MQRankSum=-2.407;QD=22.57;ReadPosRankSum=1.003;VQSLOD=5.5907;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,13:15:30.01:275,30,0	1/1:0,7:7:21.01:192,21,0	0/0:5,0:5:3.01:0,3,32	0/0:5,0:5:3.01:0,3,35	1/1:5,20:25:53.93:478,54,0	1/1:0,12:12:33.02:302,33,0	1/1:1,4:5:12:110,12,0	1/1:7,19:26:57.02:522,57,0	1/1:1,8:9:21.01:192,21,0	1/1:3,19:22:56.98:510,57,0	1/1:4,23:27:63.03:576,63,0	1/1:1,3:4:11.85:96,12,0	1/1:0,11:11:30.02:275,30,0	1/1:1,8:9:21.01:192,21,0	1/1:0,16:16:48.03:439,48,0	1/1:1,13:14:39.02:357,39,0	1/1:0,12:12:30.49:275,30,0	1/1:3,18:21:48.02:439,48,0	1/1:3,19:22:25.39:481,25,0	1/1:0,24:24:71.98:649,72,0	1/1:2,6:8:18.01:165,18,0	1/1:0,6:6:18.01:165,18,0	1/1:1,9:10:27.01:247,27,0	1/1:1,4:5:6:55,6,0	1/1:1,16:17:42.02:384,42,0	1/1:3,16:19:48.02:439,48,0	1/1:1,16:17:48.02:439,48,0	1/1:2,8:10:18.01:164,18,0
chr10	26282509	.	C	CT	676.71	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=-2.473;DP=286;FS=7.355;HRun=6;HaplotypeScore=27.4020;InbreedingCoeff=0.7484;MQ=64.67;MQ0=0;MQRankSum=-2.838;QD=20.51;ReadPosRankSum=-1.991;VQSLOD=1.6453;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:48.08:0,48,481	0/0:3,0:3:6.01:0,6,61	0/0:4,0:4:6:0,6,54	0/1:3,0:3:0:0,0,0	0/0:13,0:13:39.07:0,39,390	0/0:13,0:13:36.08:0,36,367	0/0:6,0:6:9.02:0,9,92	1/1:6,15:21:48.11:586,48,0	0/0:10,0:10:18.03:0,18,184	0/0:17,0:17:51.12:0,51,520	0/0:21,0:21:54.12:0,54,550	0/0:5,0:5:12.02:0,12,122	0/0:8,0:8:24.05:0,24,245	0/0:3,0:3:9.02:0,9,92	0/0:7,0:7:18.04:0,18,184	0/0:11,0:11:30.07:0,30,306	1/1:1,8:9:18.49:209,18,0	0/0:9,0:9:18.04:0,18,184	0/0:12,0:12:27.05:0,27,270	0/0:11,0:11:30.06:0,30,306	0/0:11,0:11:30.07:0,30,306	0/0:5,0:5:15.03:0,15,153	0/0:4,0:4:9.02:0,9,92	0/0:5,0:5:9.02:0,9,92	0/0:14,0:14:39.09:0,39,398	0/0:11,0:11:27.06:0,27,275	0/0:10,0:10:27.06:0,27,275	0/0:19,0:19:57.13:0,57,582
chr10	26282538	.	AT	A	319.25	PASS	AB=0.667;AC=2;AF=0.036;AN=56;BaseQRankSum=3.197;DP=271;FS=2.829;HRun=8;HaplotypeScore=30.5668;InbreedingCoeff=0.2251;MQ=57.32;MQ0=9;MQRankSum=-2.823;QD=9.39;ReadPosRankSum=-2.939;VQSLOD=-0.1597;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:48.15:0,48,579	0/0:2,0:2:6.02:0,6,72	0/0:5,0:2:5.82:0,6,35	0/0:4,0:3:5.84:0,6,72	0/0:10,0:10:30.09:0,30,362	0/0:16,0:16:48.15:0,48,580	0/0:5,0:4:6.02:0,6,71	0/1:9,13:21:13.61:328,0,14	0/0:4,0:4:12.04:0,12,145	0/0:15,0:14:36.11:0,36,435	0/0:18,0:17:42.13:0,42,507	0/0:6,0:6:15.05:0,15,181	0/0:9,0:9:24.07:0,24,290	0/0:3,0:3:9.03:0,9,109	0/0:7,0:7:21.03:0,21,238	0/0:9,0:9:24.04:0,24,274	0/1:7,5:11:0.30:79,0,0	0/0:13,0:12:30.09:0,30,362	0/0:8,0:7:18.06:0,18,217	0/0:12,0:11:30.05:0,30,346	0/0:7,0:7:18.05:0,18,215	0/0:6,0:5:12.04:0,12,143	0/0:4,0:4:12:0,12,129	0/0:6,0:6:12.04:0,12,145	0/0:14,0:13:36.07:0,36,419	0/0:8,0:8:21.06:0,21,249	0/0:8,0:8:21.06:0,21,253	0/0:17,0:16:45.14:0,45,543
chr10	26282685	.	G	GT	563.09	PASS	AC=24;AF=0.857;AN=28;BaseQRankSum=-1.566;DP=46;FS=35.735;HRun=0;HaplotypeScore=26.4063;InbreedingCoeff=0.3257;MQ=136.31;MQ0=1;MQRankSum=-2.902;QD=35.19;ReadPosRankSum=3.639;VQSLOD=1.3910;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:11,0:6:17.87:0,18,176	0/0:18,0:10:18.06:0,18,246	1/1:0,1:1:3.01:47,3,0	./.	./.	./.	1/1:0,1:1:3.01:48,3,0	./.	1/1:0,1:1:3.01:48,3,0	1/1:0,1:1:3.01:48,3,0	./.	./.	1/1:0,1:1:3.01:48,3,0	1/1:0,2:2:6.02:95,6,0	./.	./.	./.	1/1:0,1:1:3.01:48,3,0	./.	1/1:0,2:2:6.02:95,6,0	1/1:1,1:1:3.01:48,3,0	./.	1/1:0,2:2:3.01:48,3,0	1/1:0,1:1:3.01:48,3,0	1/1:0,1:1:3.01:48,3,0	./.
chr10	26282688	.	A	AGT	743.96	PASS	AC=24;AF=0.857;AN=28;BaseQRankSum=-2.504;DP=46;FS=47.708;HRun=0;HaplotypeScore=25.9945;InbreedingCoeff=0.3285;MQ=136.36;MQ0=0;MQRankSum=-3.239;QD=46.50;ReadPosRankSum=3.147;VQSLOD=0.9131;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:10,0:6:18.06:0,18,253	0/0:18,0:10:24.05:0,24,337	1/1:0,1:1:3.01:60,3,0	./.	./.	./.	1/1:0,1:1:3.01:61,3,0	./.	1/1:0,1:1:3.01:61,3,0	1/1:0,1:1:3.01:61,3,0	./.	./.	1/1:0,1:1:3.01:61,3,0	1/1:0,2:2:6.02:121,6,0	./.	./.	./.	1/1:0,1:1:3.01:61,3,0	./.	1/1:1,2:3:6.02:121,6,0	1/1:0,1:1:3.01:61,3,0	./.	1/1:0,2:2:3.01:61,3,0	1/1:0,1:1:3.01:61,3,0	1/1:0,1:1:3.01:61,3,0	./.
chr10	26288705	.	TC	T	551.91	PASS	AB=0.600;AC=21;AF=0.750;AN=28;BaseQRankSum=-0.879;DP=74;FS=8.609;HRun=1;HaplotypeScore=14.3595;InbreedingCoeff=0.3406;MQ=76.62;MQ0=2;MQRankSum=-2.511;QD=22.08;ReadPosRankSum=3.306;VQSLOD=2.9802;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,7:5:9.03:125,9,0	./.	0/0:23,0:6:15.03:0,15,181	0/0:17,0:8:15.65:0,16,177	./.	1/1:0,1:1:3.01:42,3,0	0/1:1,2:2:28.40:36,0,28	0/0:1,3:1:3.01:0,3,45	1/1:0,3:3:6.02:84,6,0	1/1:0,1:1:3.01:42,3,0	./.	1/1:0,1:1:3.01:42,3,0	1/1:0,2:1:3.01:42,3,0	1/1:0,2:2:6.02:83,6,0	1/1:0,1:1:3.01:42,3,0	./.	./.	./.	1/1:1,2:2:6.02:84,6,0	./.	./.	./.	./.	./.	./.	./.	1/1:0,1:1:3.01:42,3,0	./.
chr10	26290282	.	T	TA	1064.35	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=2.624;DP=469;FS=3.985;HRun=7;HaplotypeScore=55.1707;InbreedingCoeff=0.9094;MQ=75.87;MQ0=2;MQRankSum=-1.504;QD=25.34;ReadPosRankSum=-3.260;VQSLOD=2.8779;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,1:24:29.27:0,29,550	0/0:7,0:7:18.02:0,18,174	0/0:29,0:28:44.51:0,45,518	0/0:26,0:15:24.59:0,25,219	0/0:27,0:27:78.13:0,78,753	0/0:14,0:14:36.05:0,36,348	0/0:9,0:9:27.03:0,27,255	1/1:10,16:26:56.88:688,57,0	0/0:13,0:13:36.05:0,36,348	0/0:19,0:19:48.08:0,48,464	0/0:15,0:15:39.06:0,39,376	0/0:10,0:10:24.04:0,24,232	0/0:18,0:18:45.06:0,45,434	0/0:14,0:14:39.06:0,39,376	0/0:14,0:14:39.06:0,39,377	0/0:10,0:10:30.03:0,30,283	1/1:4,12:16:44.96:497,45,0	0/0:25,0:25:54.11:0,54,622	0/0:23,0:23:63.07:0,63,593	0/0:23,0:23:63.10:0,63,608	0/0:3,0:3:9.01:0,9,87	0/0:8,0:8:18.02:0,18,174	0/0:7,0:7:21.03:0,21,202	0/0:3,0:3:6:0,6,58	0/0:12,0:12:30.02:0,30,283	0/0:23,0:23:54.08:0,54,521	0/0:31,0:30:84.12:0,84,810	0/0:19,0:19:51.08:0,51,492
chr10	26290324	.	T	TA	1120.49	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=-4.718;DP=463;FS=0.631;HRun=7;HaplotypeScore=44.5554;InbreedingCoeff=0.8147;MQ=66.96;MQ0=1;MQRankSum=-0.468;QD=19.32;ReadPosRankSum=-4.244;VQSLOD=2.0656;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:54.01:0,54,511	0/0:7,0:7:18.02:0,18,174	0/0:14,0:11:27.04:0,27,260	0/1:15,0:11:3.24:3,0,148	0/0:24,0:24:69.11:0,69,666	0/0:13,0:13:30.05:0,30,290	0/0:7,0:7:21.03:0,21,202	1/1:5,28:33:84.22:986,84,0	0/0:19,0:19:54.06:0,54,514	0/0:21,0:21:60.09:0,60,579	0/0:16,0:16:45.07:0,45,434	0/0:10,0:10:27.04:0,27,260	0/0:15,0:15:42.07:0,42,406	0/0:15,0:15:42.07:0,42,406	0/0:13,0:13:39.06:0,39,377	0/0:11,0:11:30.05:0,30,290	1/1:3,7:10:21.06:253,21,0	0/0:17,0:17:48.08:0,48,463	0/0:17,0:17:39.05:0,39,371	0/0:25,0:25:69.09:0,69,660	0/0:9,0:9:27.04:0,27,260	0/0:7,0:7:15.02:0,15,145	0/0:12,0:12:36.06:0,36,348	0/0:6,0:6:18.03:0,18,174	0/0:18,0:18:54.09:0,54,522	0/0:29,0:29:81.12:0,81,782	0/0:34,0:33:96.13:0,96,921	0/0:21,0:21:12.87:0,13,421
chr10	26291950	.	C	CA	1459.87	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=10.662;DP=569;FS=6.568;HRun=7;HaplotypeScore=60.1155;InbreedingCoeff=0.8660;MQ=81.14;MQ0=0;MQRankSum=0.448;QD=20.00;ReadPosRankSum=-2.564;VQSLOD=2.4557;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:66.08:0,66,629	0/0:5,0:5:15.02:0,15,145	0/0:16,0:16:27:0,27,250	0/1:13,0:14:0.27:0,0,201	0/0:35,0:35:99:0,99,950	0/0:28,0:27:81.13:0,81,782	0/0:13,0:13:36.05:0,36,348	1/1:10,20:31:60.04:691,60,0	0/0:20,0:20:48.06:0,48,463	0/0:21,0:21:51.07:0,51,488	0/0:18,0:18:48.06:0,48,458	0/0:16,0:16:45.07:0,45,434	0/0:28,0:28:75.12:0,75,724	0/0:18,0:18:51.06:0,51,486	0/0:22,0:22:57.09:0,57,550	0/0:21,0:21:54.07:0,54,515	1/1:3,25:27:75.19:890,75,0	0/0:11,0:11:24:0,24,223	0/0:29,0:29:81.12:0,81,778	0/0:18,0:18:48.08:0,48,464	0/0:19,0:19:48.07:0,48,464	0/0:17,0:17:42.05:0,42,401	0/0:17,0:17:48.08:0,48,464	0/0:7,0:7:21.03:0,21,203	0/0:23,0:23:66.11:0,66,637	0/0:21,0:21:57.09:0,57,551	0/0:40,0:40:99:0,117,1104	0/0:10,0:10:30.05:0,30,290
chr10	26292712	.	A	AT	1071.20	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=4.880;DP=441;FS=0.000;HRun=8;HaplotypeScore=58.9529;InbreedingCoeff=0.7108;MQ=88.35;MQ0=3;MQRankSum=-0.122;QD=11.40;ReadPosRankSum=-3.852;VQSLOD=1.5949;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:6:18.01:0,18,164	0/0:6,0:6:18.01:0,18,165	0/0:37,0:27:31.39:0,31,240	0/1:46,0:28:24.67:25,0,136	0/0:21,0:21:60.02:0,60,545	0/0:16,0:16:42.02:0,42,384	0/0:10,0:10:27.01:0,27,247	1/1:10,22:32:65.74:760,66,0	0/0:13,0:13:39.02:0,39,357	0/0:14,0:14:42.02:0,42,382	0/0:16,0:16:42:0,42,378	0/0:4,0:4:12.01:0,12,110	0/0:12,0:12:27:0,27,247	0/0:13,0:13:39.02:0,39,357	0/0:12,0:12:27.01:0,27,247	0/0:12,0:12:30.01:0,30,275	1/1:3,13:16:36.11:415,36,0	0/0:16,0:16:33.02:0,33,302	0/0:15,0:15:39.02:0,39,357	0/0:21,0:21:51.03:0,51,467	0/0:14,0:14:30.01:0,30,275	0/0:14,0:15:32.04:0,32,281	0/0:17,0:17:39:0,39,357	0/0:2,0:3:6:0,6,55	0/0:10,0:10:24.01:0,24,220	0/0:15,0:15:45.02:0,45,412	0/0:25,0:26:71.07:0,71,637	0/0:3,0:3:9:0,9,82
chr10	26294587	.	TTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTC	T	11652.62	PASS	AC=44;AF=0.846;AN=52;BaseQRankSum=3.281;DP=347;FS=4.165;HRun=0;HaplotypeScore=222.2210;InbreedingCoeff=0.5818;MQ=56.24;MQ0=1;MQRankSum=-0.507;QD=42.37;ReadPosRankSum=2.941;VQSLOD=3.8232;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:7,9:15:6.02:393,6,0	1/1:7,0:7:18.06:242,18,0	0/0:11,0:9:9.83:0,10,353	./.	1/1:6,16:22:24.01:1255,24,0	1/1:5,7:12:6.02:489,6,0	1/1:5,0:5:6:62,6,0	0/0:28,0:21:30.06:0,30,1168	1/1:4,7:11:6.02:480,6,0	1/1:9,9:17:18.06:1072,18,0	1/1:6,10:16:15.05:985,15,0	1/1:8,0:8:3.01:141,3,0	1/1:9,7:16:6.02:456,6,0	1/1:1,8:8:6.02:478,6,0	0/0:1,0:6:8.79:0,9,52	1/1:7,7:14:6.02:489,6,0	0/0:19,0:18:48.16:0,48,3515	1/1:3,1:4:6.02:284,6,0	1/1:9,10:19:27.06:951,27,0	1/1:7,9:16:8.99:509,9,0	1/1:5,0:5:3.01:38,3,0	1/1:7,0:7:3.01:38,3,0	1/1:4,10:14:2.67:244,3,0	./.	1/1:3,12:14:15.05:1190,15,0	1/1:4,8:11:21.03:638,21,0	1/1:4,11:15:6.02:489,6,0	1/1:7,7:14:9.03:730,9,0
chr10	26294614	.	TC	T	1105.72	PASS	AB=1.000;AC=45;AF=0.833;AN=54;BaseQRankSum=7.751;DP=241;FS=0.000;HRun=1;HaplotypeScore=87.5354;InbreedingCoeff=0.4671;MQ=44.34;MQ0=5;MQRankSum=-0.940;QD=6.39;ReadPosRankSum=5.129;VQSLOD=0.6553;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,0:8:3.48:35,3,0	1/1:6,0:6:17.85:127,18,0	0/0:7,0:4:11.53:0,12,141	./.	1/1:16,0:16:20.19:187,20,0	1/1:7,0:7:5.20:29,5,0	1/1:1,0:1:2.97:20,3,0	0/0:35,0:26:70.28:0,70,940	1/1:7,0:7:5.23:47,5,0	1/1:10,0:9:12.54:77,13,0	1/1:10,0:10:14.21:134,14,0	1/1:0,4:4:3.01:41,3,0	1/1:7,0:7:5.19:27,5,0	1/1:8,0:7:5.23:47,5,0	0/1:6,0:6:5.75:6,0,33	1/1:7,0:7:4.44:14,4,0	0/0:24,0:23:66.21:0,66,947	1/1:3,0:3:5.20:28,5,0	1/1:11,0:10:19.35:127,19,0	1/1:9,0:9:4.44:14,4,0	1/1:2,0:1:2.97:20,3,0	1/1:2,0:2:5.19:27,5,0	1/1:10,0:10:2.22:7,2,0	0/0:1,0:1:3.01:0,3,44	1/1:12,0:11:13.43:91,13,0	1/1:8,0:7:10.37:54,10,0	1/1:11,0:11:5.21:31,5,0	1/1:7,0:7:8.23:67,8,0
chr10	26297212	.	AGAT	A	24300.49	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=5.208;DP=674;FS=3.851;HRun=0;HaplotypeScore=118.6427;InbreedingCoeff=0.9977;MQ=55.42;MQ0=0;MQRankSum=1.998;QD=44.43;ReadPosRankSum=5.450;VQSLOD=6.3988;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,42:43:99:1930,111,0	1/1:0,7:7:18.06:312,18,0	0/0:25,0:22:63.08:0,63,1299	0/0:20,0:19:57.20:0,57,1270	1/1:1,23:24:44.81:779,45,0	1/1:0,22:22:57.20:1004,57,0	1/1:1,20:21:44.73:772,45,0	0/0:29,0:29:87.30:0,87,2008	1/1:0,15:15:42.14:727,42,0	1/1:1,16:17:51.17:892,51,0	1/1:0,18:18:48.12:786,48,0	1/1:0,27:27:72.25:1239,72,0	1/1:2,27:29:69.24:1190,69,0	1/1:1,25:26:66.22:1109,66,0	1/1:0,27:27:75.26:1295,75,0	1/1:1,17:18:48.16:845,48,0	0/0:51,2:53:50.69:0,51,3388	1/1:1,31:32:87.30:1534,87,0	1/1:0,16:15:45.15:775,45,0	1/1:0,26:26:75.22:1230,75,0	1/1:0,38:38:96.33:1664,96,0	1/1:0,21:21:60.20:1023,60,0	1/1:0,19:19:38.79:599,39,0	1/1:0,26:26:59.95:1058,60,0	1/1:0,22:22:60.20:1004,60,0	1/1:0,18:18:54.16:906,54,0	1/1:1,18:19:48.05:832,48,0	1/1:0,16:16:45.15:793,45,0
chr10	26300746	.	AT	A	399.21	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.777;DP=541;FS=1.836;HRun=9;HaplotypeScore=56.8871;InbreedingCoeff=0.8862;MQ=80.27;MQ0=0;MQRankSum=-1.094;QD=21.01;ReadPosRankSum=1.049;VQSLOD=4.4141;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:63.15:0,63,712	0/0:9,0:9:27.08:0,27,312	0/0:18,0:18:32.97:0,33,345	0/0:8,0:8:21.02:0,21,225	0/0:34,0:34:93.16:0,93,1073	0/0:32,0:32:90.26:0,90,1029	0/0:12,1:13:8.63:0,9,344	0/0:6,0:25:58.16:0,58,312	0/0:25,0:25:66.18:0,66,751	0/0:29,0:29:84.20:0,84,953	0/0:24,0:24:63.19:0,63,727	0/0:23,0:23:57.17:0,57,658	0/0:12,0:12:36.11:0,36,415	0/0:18,0:18:51.14:0,51,579	1/1:0,19:19:54.03:494,54,0	0/0:18,0:18:54.16:0,54,623	0/0:3,0:23:51.04:0,51,258	0/0:3,0:3:9.03:0,9,104	0/0:17,0:17:39.10:0,39,441	0/0:29,0:29:75.22:0,75,864	0/0:10,0:12:29.75:0,30,306	0/0:13,0:13:36.11:0,36,415	0/0:21,1:22:32.71:0,33,630	0/0:14,0:14:39.10:0,39,439	0/0:29,0:29:84.25:0,84,969	0/0:12,0:12:33.10:0,33,381	0/0:25,0:25:66.20:0,66,762	0/0:12,0:12:36.11:0,36,415
chr10	26301459	.	A	ATTTATTTATTTG	1598.54	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.608;DP=580;FS=8.690;HRun=0;HaplotypeScore=184.3573;InbreedingCoeff=0.9625;MQ=62.41;MQ0=1;MQRankSum=-4.636;QD=26.64;ReadPosRankSum=-3.504;VQSLOD=0.8998;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:59.93:0,60,1433	0/0:10,0:10:27.04:0,27,778	0/0:16,0:14:25.42:0,25,659	0/0:11,0:10:27.08:0,27,597	0/0:23,0:23:69.16:0,69,1917	0/0:19,0:19:54.09:0,54,1307	0/0:10,0:10:30.04:0,30,773	1/1:38,0:38:99:1275,102,0	0/0:18,0:18:48.12:0,48,1371	0/0:31,0:31:90.24:0,90,2605	0/0:36,0:36:99:0,105,3133	0/0:21,0:21:57.11:0,57,1851	0/0:19,0:19:54.10:0,54,1463	0/0:12,0:12:33.02:0,33,731	0/0:21,0:21:60.04:0,60,1518	0/0:22,0:22:66.17:0,66,2110	1/1:2,14:22:9.03:437,9,0	0/0:12,0:12:33.10:0,33,887	0/0:25,0:25:69.13:0,69,1758	0/0:37,0:37:99:0,105,2851	0/0:12,0:11:30.06:0,30,720	0/0:17,0:17:48.10:0,48,1300	0/0:16,0:16:42.08:0,42,1223	0/0:20,0:20:54.11:0,54,1501	0/0:23,0:23:60.13:0,60,1621	0/0:26,0:26:72.22:0,72,2316	0/0:33,0:33:96.23:0,96,3100	0/0:7,0:7:18.06:0,18,482
chr10	26301934	.	C	CTTTT	666.06	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=0.363;DP=522;FS=4.903;HRun=10;HaplotypeScore=114.9715;InbreedingCoeff=0.9232;MQ=80.61;MQ0=0;MQRankSum=-2.134;QD=15.49;ReadPosRankSum=-5.136;VQSLOD=-0.1721;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:63.04:0,63,765	0/0:6,0:6:18.06:0,18,255	0/0:22,0:18:21.34:0,21,404	0/0:20,0:16:16.80:0,17,245	0/0:19,0:19:51.16:0,51,720	0/0:25,0:26:69.17:0,69,939	0/0:12,0:12:30.06:0,30,423	1/1:22,9:32:33.09:635,33,0	0/0:21,0:21:60.15:0,60,809	0/0:19,0:19:48.07:0,48,621	0/0:32,0:32:87.23:0,87,1223	0/0:9,0:9:27.07:0,27,353	0/0:19,0:19:48.09:0,48,660	0/0:24,0:24:66.20:0,66,933	0/0:19,0:19:48.11:0,48,678	0/0:17,0:17:48.13:0,48,678	1/1:5,5:11:7.27:144,7,0	0/0:10,0:10:25.30:0,25,320	0/0:17,0:19:46.34:0,46,621	0/0:25,0:27:58.37:0,58,788	0/0:7,0:7:18.04:0,18,251	0/0:22,0:22:57.10:0,57,807	0/0:24,0:24:63.31:0,63,911	0/0:12,0:12:33.07:0,33,466	0/0:21,0:21:60.19:0,60,842	0/0:16,0:16:33.04:0,33,449	0/0:28,0:28:75.21:0,75,1061	0/0:4,0:4:12.02:0,12,150
chr10	26303032	.	T	TA	2176.66	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.051;DP=670;FS=9.947;HRun=0;HaplotypeScore=67.8234;InbreedingCoeff=0.9948;MQ=87.18;MQ0=0;MQRankSum=-4.068;QD=41.86;ReadPosRankSum=-1.807;VQSLOD=2.9931;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,123,1702	0/0:7,0:7:18.06:0,18,252	0/0:23,0:23:69.22:0,69,947	0/0:23,0:22:63.20:0,63,854	0/0:29,0:29:87.28:0,87,1200	0/0:22,0:22:63.21:0,63,881	0/0:31,0:31:93.31:0,93,1301	1/1:2,27:29:84.25:1291,84,0	0/0:26,0:26:78.26:0,78,1089	0/0:28,0:28:75.25:0,75,1036	0/0:23,0:23:69.23:0,69,965	0/0:24,0:24:72.24:0,72,1007	0/0:26,0:26:78.25:0,78,1075	0/0:27,0:27:81.24:0,81,1079	0/0:27,0:27:78.26:0,78,1091	0/0:25,0:25:72.23:0,72,992	1/1:0,23:23:63.21:1007,63,0	0/0:16,0:16:45.13:0,45,610	0/0:17,0:17:51.16:0,51,696	0/0:19,0:19:54.18:0,54,755	0/0:41,0:41:99:0,123,1703	0/0:18,0:18:54.18:0,54,755	0/0:17,0:16:48.12:0,48,649	0/0:21,0:21:60.15:0,60,799	0/0:27,0:27:81.27:0,81,1131	0/0:16,0:16:45.14:0,45,606	0/0:36,0:36:99:0,108,1503	0/0:8,0:8:24.08:0,24,336
chr10	26303401	.	A	AT	1761.60	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-10.483;DP=620;FS=3.338;HRun=6;HaplotypeScore=56.8658;InbreedingCoeff=0.9835;MQ=74.02;MQ0=0;MQRankSum=0.106;QD=29.86;ReadPosRankSum=-3.482;VQSLOD=2.8902;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:87.14:0,87,868	0/0:14,0:14:39.09:0,39,398	0/0:13,0:13:12.08:0,12,190	0/0:12,0:12:26.27:0,26,248	0/0:31,0:31:87.19:0,87,888	0/0:24,0:24:72.16:0,72,734	0/0:21,0:21:63.14:0,63,643	1/1:7,32:39:96.31:1206,96,0	0/0:19,0:19:54.12:0,54,551	0/0:32,0:32:90.19:0,90,914	0/0:26,0:26:72.16:0,72,735	0/0:20,0:20:51.10:0,51,514	0/0:19,0:19:54.12:0,54,551	0/0:15,0:15:39.09:0,39,398	0/0:28,0:28:81.18:0,81,826	0/0:18,0:18:54.12:0,54,551	1/1:0,20:20:54.17:677,54,0	0/0:10,0:10:30.04:0,30,297	0/0:17,0:17:45.07:0,45,450	0/0:35,0:35:99:0,102,1040	0/0:14,0:14:36.08:0,36,367	0/0:23,0:23:66.12:0,66,664	0/0:17,0:17:48.11:0,48,488	0/0:17,0:17:51.12:0,51,520	0/0:33,0:33:96.22:0,96,980	0/0:27,0:27:72.16:0,72,734	0/0:29,0:29:81.18:0,81,826	0/0:17,0:17:51.12:0,51,520
chr10	26304397	.	CTT	C	782.60	PASS	AB=0.933;AC=5;AF=0.089;AN=56;BaseQRankSum=7.914;DP=513;FS=4.790;HRun=12;HaplotypeScore=72.9527;InbreedingCoeff=0.7454;MQ=64.85;MQ0=3;MQRankSum=-1.741;QD=12.42;ReadPosRankSum=0.180;VQSLOD=2.2614;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:68.63:0,69,943	0/0:10,0:12:32.56:0,33,399	0/1:13,0:11:27.46:27,0,275	0/0:20,0:18:41.65:0,42,489	0/0:21,0:22:57.91:0,58,783	0/0:13,1:15:8.61:0,9,485	0/0:12,0:12:27.09:0,27,395	1/1:10,16:26:42.02:427,42,0	0/0:11,0:11:21.07:0,21,313	0/0:12,0:15:32.08:0,32,404	0/0:16,0:19:46.54:0,47,559	0/0:24,0:25:64.92:0,65,856	0/0:21,0:21:35.94:0,36,519	0/0:15,0:15:33.07:0,33,468	0/0:2,0:19:37.43:0,37,132	0/0:20,0:23:55.63:0,56,721	1/1:6,17:22:45.07:458,45,0	0/0:22,0:23:66.17:0,66,936	0/0:22,0:21:39.11:0,39,544	0/0:19,0:20:56.66:0,57,762	0/0:8,0:9:26.58:0,27,367	0/0:16,0:19:45.10:0,45,610	0/0:24,0:24:57.09:0,57,767	0/0:16,0:16:36.12:0,36,536	0/0:14,0:14:20.85:0,21,261	0/0:16,0:18:41.47:0,41,532	0/0:21,0:23:50.36:0,50,672	0/0:4,0:4:12.04:0,12,178
chr10	26304495	.	T	TC	4049.50	PASS	AB=1.000;AC=47;AF=0.839;AN=56;BaseQRankSum=-6.388;DP=292;FS=1.355;HRun=7;HaplotypeScore=29.9953;InbreedingCoeff=0.6695;MQ=57.21;MQ0=11;MQRankSum=2.723;QD=16.73;ReadPosRankSum=1.895;VQSLOD=2.5418;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,16:17:30.98:365,31,0	1/1:3,2:5:6.02:72,6,0	0/0:16,0:7:14.69:0,15,112	0/1:11,0:6:21.79:22,0,23	1/1:3,7:9:12.04:144,12,0	1/1:3,7:10:18.06:217,18,0	1/1:4,9:12:15.05:179,15,0	0/0:0,0:9:18.33:0,18,51	1/1:2,7:8:9.03:109,9,0	1/1:3,9:12:27.06:302,27,0	1/1:2,12:14:21.06:254,21,0	1/1:2,12:11:14.93:179,15,0	1/1:1,10:11:18.06:217,18,0	1/1:2,8:9:18.05:215,18,0	0/0:15,0:14:33.05:0,33,319	1/1:0,8:8:14.28:180,14,0	0/0:5,0:8:3.85:0,4,11	1/1:0,8:8:11.99:129,12,0	1/1:1,3:4:9.03:108,9,0	1/1:3,4:6:6.02:72,6,0	1/1:0,11:11:15.05:181,15,0	1/1:2,5:7:11.99:129,12,0	1/1:1,12:13:21.06:254,21,0	1/1:3,13:15:18.06:217,18,0	1/1:2,6:8:8.94:89,9,0	1/1:3,4:6:12.02:124,12,0	1/1:1,6:6:6.02:72,6,0	1/1:0,7:7:18.06:217,18,0
chr10	26305231	.	CT	C	880.11	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=8.159;DP=527;FS=1.282;HRun=9;HaplotypeScore=51.0535;InbreedingCoeff=0.8362;MQ=85.25;MQ0=0;MQRankSum=-2.136;QD=13.54;ReadPosRankSum=-3.702;VQSLOD=2.4370;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:42.11:0,42,475	0/0:10,0:10:27.07:0,27,303	0/1:19,0:20:2.39:2,0,283	0/0:13,0:14:14.36:0,14,187	0/0:30,0:30:84.25:0,84,969	0/0:24,0:24:63.19:0,63,727	0/0:13,0:13:30.09:0,30,346	1/1:3,25:28:74.99:671,75,0	0/0:11,0:12:32.93:0,33,361	0/0:21,0:21:60.14:0,60,675	0/0:23,0:23:66.20:0,66,762	0/0:15,0:15:42.11:0,42,474	0/0:20,0:20:60.16:0,60,680	0/0:20,0:20:60.18:0,60,692	0/0:20,1:21:23.67:0,24,517	0/0:12,0:12:24.07:0,24,277	1/1:2,15:17:36.02:329,36,0	0/0:8,0:8:21.06:0,21,241	0/0:21,0:21:57.14:0,57,637	0/0:25,0:25:69.16:0,69,772	0/0:6,0:6:18.05:0,18,208	0/0:25,0:25:69.20:0,69,795	0/0:21,0:21:60.15:0,60,672	0/0:12,0:12:30.09:0,30,346	0/0:23,1:24:44.75:0,45,769	0/0:26,0:26:75.22:0,75,866	0/0:29,0:29:81.23:0,81,920	0/0:13,0:13:36.11:0,36,415
chr10	26305526	.	G	GTC	1872.40	PASS	AB=0.947;AC=5;AF=0.089;AN=56;BaseQRankSum=1.212;DP=511;FS=9.598;HRun=0;HaplotypeScore=129.9818;InbreedingCoeff=0.7596;MQ=70.44;MQ0=1;MQRankSum=-5.652;QD=29.26;ReadPosRankSum=-3.996;VQSLOD=4.1146;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:17,1:18:49.73:50,0,307	0/0:5,0:5:15.05:0,15,229	0/0:16,0:15:28.97:0,29,487	0/0:14,0:14:39.10:0,39,544	0/0:30,0:29:71.50:0,71,1037	0/0:23,0:23:63.21:0,63,963	0/0:8,0:9:18.06:0,18,267	1/1:9,23:32:90.29:1520,90,0	0/0:15,0:15:36.12:0,36,551	0/0:28,0:28:84.25:0,84,1210	0/0:26,0:26:75.24:0,75,1123	0/0:15,0:15:42.14:0,42,642	0/0:13,0:13:30.10:0,30,459	0/0:18,0:18:48.16:0,48,735	0/0:20,0:20:60.20:0,60,918	0/0:18,0:18:51.17:0,51,780	1/1:2,12:14:23.85:432,24,0	0/0:24,0:23:48.15:0,48,715	0/0:12,0:12:36.10:0,36,494	0/0:27,0:27:78.25:0,78,1169	0/0:9,0:9:24.08:0,24,367	0/0:13,0:13:36.11:0,36,530	0/0:17,0:17:51.17:0,51,776	0/0:6,0:6:12.03:0,12,183	0/0:21,0:21:57.18:0,57,846	0/0:14,0:14:42.13:0,42,621	0/0:34,0:34:87.30:0,87,1329	0/0:20,0:20:57.15:0,57,841
chr10	26305552	.	A	ATAT	23378.98	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-6.329;DP=539;FS=6.879;HRun=0;HaplotypeScore=80.4507;InbreedingCoeff=0.8943;MQ=75.48;MQ0=1;MQRankSum=-8.214;QD=45.40;ReadPosRankSum=4.388;VQSLOD=6.7123;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,11:17:21.07:459,21,0	1/1:1,4:5:12.04:262,12,0	0/0:16,0:16:48.16:0,48,740	0/0:8,0:8:24.08:0,24,369	1/1:3,31:35:75.60:1474,76,0	1/1:1,20:22:51.18:1114,51,0	1/1:1,6:7:9.03:197,9,0	1/1:11,19:33:66.21:1252,66,0	1/1:4,15:19:27.09:589,27,0	1/1:4,19:23:57.18:1158,57,0	1/1:3,22:27:63.13:1266,63,0	1/1:1,14:16:36.12:787,36,0	1/1:1,16:17:45.15:976,45,0	1/1:3,12:16:30.10:648,30,0	1/1:1,19:21:57.20:1245,57,0	1/1:2,22:25:51.18:1107,51,0	1/1:5,8:13:17.98:301,18,0	1/1:4,21:26:45.15:982,45,0	1/1:3,14:18:48.15:951,48,0	1/1:4,25:29:72.20:1514,72,0	1/1:0,4:4:9.03:197,9,0	1/1:2,11:13:33.11:721,33,0	1/1:0,19:20:48.16:1049,48,0	1/1:1,5:7:8.72:196,9,0	1/1:0,27:27:57.20:1245,57,0	1/1:1,17:20:57.18:1133,57,0	1/1:2,28:34:63.22:1375,63,0	1/1:1,19:20:54.19:1180,54,0
chr10	26306531	.	AT	A	10275.46	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=3.725;DP=457;FS=3.454;HRun=7;HaplotypeScore=49.1185;InbreedingCoeff=0.9411;MQ=73.59;MQ0=0;MQRankSum=-3.980;QD=26.08;ReadPosRankSum=6.072;VQSLOD=4.8726;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,13:14:30.06:306,30,0	1/1:0,10:10:30.07:306,30,0	0/0:15,0:15:36.37:0,36,378	0/0:7,0:7:4.63:0,5,70	1/1:2,18:20:48.11:490,48,0	1/1:1,19:20:54.12:551,54,0	1/1:2,12:14:36.08:367,36,0	0/0:29,0:29:81.24:0,81,992	1/1:0,19:19:51.12:520,51,0	1/1:3,27:30:75.17:765,75,0	1/1:2,21:23:57.13:581,57,0	1/1:0,10:10:30.07:306,30,0	1/1:2,15:17:45.10:458,45,0	1/1:1,12:13:33.07:337,33,0	1/1:0,12:12:33.08:337,33,0	1/1:0,8:8:21.05:214,21,0	0/0:12,0:11:32.11:0,32,367	1/1:1,9:10:27.06:275,27,0	1/1:1,21:22:63.14:642,63,0	1/1:2,28:30:75.16:765,75,0	1/1:0,10:10:30.07:306,30,0	1/1:1,14:15:36.08:367,36,0	1/1:2,18:20:54.12:551,54,0	1/1:1,6:7:18.04:184,18,0	1/1:1,13:14:39.09:398,39,0	1/1:2,18:20:54.11:545,54,0	1/1:6,23:29:60.13:612,60,0	1/1:4,3:7:9.02:92,9,0
chr10	26306614	.	T	TA	1009.91	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-0.417;DP=582;FS=8.401;HRun=8;HaplotypeScore=69.0470;InbreedingCoeff=0.9291;MQ=70.30;MQ0=0;MQRankSum=0.125;QD=28.05;ReadPosRankSum=-2.577;VQSLOD=3.0126;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:42.01:0,42,384	0/0:5,0:5:9:0,9,82	0/0:8,0:8:14.99:0,15,129	0/0:11,0:11:20.49:0,20,166	0/0:33,0:33:90.04:0,90,824	0/0:17,0:16:44.97:0,45,403	0/0:17,0:17:42.01:0,42,384	1/1:2,22:24:63.18:717,63,0	0/0:27,0:27:75.01:0,75,677	0/0:33,0:33:90.03:0,90,818	0/0:37,0:37:96.01:0,96,869	0/0:17,0:17:39:0,39,357	0/0:18,0:18:45.01:0,45,407	0/0:19,0:19:48.02:0,48,439	0/0:30,0:30:81.02:0,81,736	0/0:22,0:22:63.02:0,63,572	1/1:0,12:12:36.11:414,36,0	0/0:16,0:16:33.35:0,33,303	0/0:23,0:23:63.02:0,63,572	0/0:35,0:35:96.04:0,96,879	0/0:7,0:7:18.01:0,18,165	0/0:15,0:15:36.01:0,36,329	0/0:25,0:25:71.15:0,71,651	0/0:24,0:24:63:0,63,571	0/0:24,0:24:69.04:0,69,632	0/0:24,0:23:65.94:0,66,588	0/0:36,0:36:93:0,93,840	0/0:4,0:4:9:0,9,82
chr10	26306803	.	TAACCAACCAACC	T	22949.41	PASS	AB=0.655;AC=48;AF=0.857;AN=56;BaseQRankSum=2.117;DP=616;FS=5.321;HRun=0;HaplotypeScore=218.5900;InbreedingCoeff=0.6906;MQ=64.82;MQ0=3;MQRankSum=-3.853;QD=44.30;ReadPosRankSum=4.455;VQSLOD=4.2551;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:18,14:32:14.15:973,14,0	1/1:2,9:11:24.08:836,24,0	0/0:17,0:14:9.03:0,9,181	0/0:37,0:22:24.55:0,25,771	1/1:5,16:21:45.12:1204,45,0	1/1:6,11:18:21.07:732,21,0	1/1:11,9:20:16.62:598,17,0	0/0:31,0:42:11.77:0,12,182	1/1:5,13:18:33.11:1150,33,0	1/1:14,16:30:48.16:1483,48,0	1/1:7,17:24:45.11:1447,45,0	1/1:4,17:21:36.12:1254,36,0	1/1:6,15:21:32.86:1149,33,0	1/1:7,15:22:30.10:1045,30,0	1/1:4,20:24:45.15:1552,45,0	1/1:4,18:22:30.10:1041,30,0	0/1:9,0:19:5.39:5,0,136	1/1:6,0:5:3.01:61,3,0	1/1:11,7:17:21.06:623,21,0	1/1:7,25:32:52.47:1711,52,0	0/1:8,9:17:0.92:93,0,1	1/1:8,8:16:15.05:515,15,0	1/1:4,15:19:30.10:1014,30,0	1/1:11,6:17:6.02:209,6,0	1/1:6,9:15:18.06:621,18,0	1/1:9,20:29:57.20:1753,57,0	1/1:10,24:34:35.94:1254,36,0	1/1:5,7:12:18.06:627,18,0
chr10	26308188	.	AAAC	A	1493.25	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.734;DP=604;FS=11.695;HRun=0;HaplotypeScore=90.1332;InbreedingCoeff=0.9910;MQ=65.60;MQ0=0;MQRankSum=-2.233;QD=27.65;ReadPosRankSum=-1.563;VQSLOD=2.9286;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:54.12:0,54,1022	0/0:14,0:14:36.12:0,36,721	0/0:20,0:15:29.24:0,29,477	0/0:34,0:29:27.79:0,28,493	0/0:33,0:33:93.30:0,93,1806	0/0:22,0:22:54.18:0,54,1041	0/0:18,0:18:51.17:0,51,984	1/1:6,25:31:69.12:906,69,0	0/0:12,0:12:27.09:0,27,539	0/0:30,0:30:78.25:0,78,1441	0/0:36,0:36:96.32:0,96,1875	0/0:9,0:9:21.07:0,21,427	0/0:22,0:22:48.13:0,48,881	0/0:13,0:13:33.10:0,33,571	0/0:24,0:24:51.15:0,51,944	0/0:14,0:14:36.12:0,36,726	1/1:3,20:22:49.41:709,49,0	0/0:12,0:13:33.06:0,33,619	0/0:23,0:22:39.10:0,39,705	0/0:32,0:32:90.31:0,90,1763	0/0:9,0:9:18.06:0,18,373	0/0:28,0:28:75.07:0,75,1459	0/0:27,0:27:54.18:0,54,1099	0/0:12,0:11:24.08:0,24,470	0/0:23,0:23:66.21:0,66,1212	0/0:16,0:16:39.12:0,39,719	0/0:20,0:20:54.17:0,54,984	0/0:22,0:22:54.18:0,54,1060
chr10	26308472	.	CT	C	1589.10	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.349;DP=681;FS=1.887;HRun=3;HaplotypeScore=65.1671;InbreedingCoeff=0.9956;MQ=91.93;MQ0=0;MQRankSum=-2.711;QD=31.78;ReadPosRankSum=-1.132;VQSLOD=3.3645;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:96.32:0,96,1383	0/0:13,0:13:39.13:0,39,561	0/0:25,0:25:72.24:0,72,998	0/0:30,0:30:90.29:0,90,1245	0/0:25,0:25:72.23:0,72,1018	0/0:35,0:35:99:0,105,1490	0/0:25,0:25:75.24:0,75,1063	1/1:1,25:26:72.03:892,72,0	0/0:29,0:29:78.26:0,78,1123	0/0:28,0:28:84.27:0,84,1179	0/0:21,0:21:60.18:0,60,830	0/0:23,0:23:66.22:0,66,951	0/0:26,0:26:75.25:0,75,1080	0/0:21,0:21:54.15:0,54,725	0/0:36,0:36:99:0,105,1481	0/0:23,0:22:69.20:0,69,956	1/1:1,23:24:66.21:818,66,0	0/0:12,0:12:30.10:0,30,432	0/0:19,0:19:57.19:0,57,821	0/0:28,0:28:84.28:0,84,1210	0/0:26,0:26:69.23:0,69,992	0/0:25,0:25:75.25:0,75,1079	0/0:21,0:21:63.21:0,63,906	0/0:38,0:38:99:0,111,1599	0/0:16,0:16:45.15:0,45,648	0/0:20,0:20:60.19:0,60,849	0/0:27,0:27:75.22:0,75,1040	0/0:6,0:6:18.06:0,18,259
chr10	26309297	.	TAGAGATAGAGATAGAGATAGAGATAG	T	1646.06	PASS	AB=0.833;AC=3;AF=0.054;AN=56;BaseQRankSum=7.340;DP=356;FS=7.596;HRun=0;HaplotypeScore=218.3047;InbreedingCoeff=0.1078;MQ=52.88;MQ0=4;MQRankSum=-0.101;QD=16.97;ReadPosRankSum=-2.448;VQSLOD=1.2917;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:13:18.04:0,18,1024	0/1:5,0:4:0:0,0,0	0/0:6,0:2:1.22:0,1,3	0/0:7,0:4:2.26:0,2,27	0/0:7,0:7:9.03:0,9,309	0/0:8,0:8:12.04:0,12,917	0/0:6,0:6:9.03:0,9,432	0/1:43,36:75:99:1682,0,3109	0/0:9,0:9:12.04:0,12,470	0/0:10,0:10:27.09:0,27,1575	0/0:17,0:17:23.53:0,24,877	0/0:16,0:16:36.09:0,36,1695	0/0:14,0:14:15.05:0,15,644	0/0:6,0:6:6.02:0,6,311	0/0:9,0:9:24.08:0,24,2047	0/0:6,0:6:9.17:0,9,623	0/1:10,0:13:51.40:51,0,82	0/0:13,0:13:36:0,36,769	0/0:15,0:13:39.12:0,39,2642	0/0:15,0:15:18.05:0,18,1044	0/0:8,0:8:12.04:0,12,563	0/0:4,0:4:6.02:0,6,275	0/0:7,0:7:3.01:0,3,150	0/0:4,0:4:9.03:0,9,621	0/0:21,0:21:36.09:0,36,2100	0/0:7,0:7:21.07:0,21,1558	0/0:19,0:19:33.07:0,33,1578	0/0:12,0:12:28.04:0,28,1417
chr10	26309339	.	T	TAG	475.22	PASS	AB=0.923;AC=10;AF=0.179;AN=56;BaseQRankSum=4.506;DP=457;FS=6.340;HRun=0;HaplotypeScore=118.6247;InbreedingCoeff=-0.2351;MQ=67.40;MQ0=2;MQRankSum=-4.833;QD=2.48;ReadPosRankSum=-5.448;VQSLOD=-0.1289;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:13,0:13:10.96:11,0,117	0/0:9,0:8:6.02:0,6,86	0/0:15,0:7:8.72:0,9,75	0/0:29,0:17:12.98:0,13,146	0/0:14,1:15:30.06:0,30,430	0/1:9,4:13:30.91:31,0,258	0/0:5,0:5:6.02:0,6,85	0/1:70,0:70:99:294,0,1463	0/0:13,1:14:27.09:0,27,387	0/0:15,0:15:28.86:0,29,499	0/1:12,4:16:28.28:28,0,237	0/1:12,3:15:21.86:22,0,394	0/0:15,5:20:24.08:0,24,344	0/0:8,0:8:12.04:0,12,172	0/0:14,0:14:39.13:0,39,557	0/1:9,0:9:36.41:36,0,197	0/0:16,0:16:13.63:0,14,207	0/0:12,0:12:26.98:0,27,386	0/1:21,2:23:99:115,0,593	0/0:11,6:18:21.07:0,21,301	0/0:12,0:12:24.06:0,24,324	0/0:9,0:9:21.07:0,21,301	0/0:10,1:11:12.03:0,12,154	0/1:7,0:7:36.80:37,0,197	0/0:18,2:20:24.07:0,24,344	0/1:10,1:11:24.77:25,0,337	0/0:18,5:23:39.13:0,39,558	0/1:15,0:15:18.96:19,0,436
chr10	26309734	.	GTT	G	10622.19	PASS	AB=0.600;AC=49;AF=0.875;AN=56;BaseQRankSum=-6.695;DP=600;FS=0.000;HRun=12;HaplotypeScore=95.7469;InbreedingCoeff=0.8057;MQ=76.78;MQ0=2;MQRankSum=-1.569;QD=19.97;ReadPosRankSum=4.449;VQSLOD=4.2611;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,31:38:81.08:817,81,0	1/1:2,15:17:39.06:397,39,0	0/0:18,0:16:28.76:0,29,269	0/0:16,0:16:7.97:0,8,119	1/1:5,9:16:26.46:237,26,0	1/1:3,22:26:56.85:561,57,0	1/1:3,14:18:41.49:389,41,0	1/1:10,1:34:34.35:164,34,0	1/1:1,13:15:29.77:357,30,0	1/1:2,17:19:48.07:488,48,0	1/1:4,19:27:37.89:451,38,0	1/1:7,31:38:65.20:859,65,0	1/1:3,15:19:38.55:359,39,0	1/1:8,9:18:18.75:245,19,0	0/0:10,1:32:34.29:0,34,264	1/1:4,13:18:20.64:384,21,0	0/1:6,1:18:63.60:64,0,65	1/1:3,10:13:27.03:275,27,0	1/1:0,12:12:33.05:333,33,0	1/1:4,19:24:47.78:469,48,0	1/1:3,19:22:48.10:488,48,0	1/1:2,20:23:25.10:515,25,0	1/1:2,16:20:41.80:479,42,0	1/1:3,18:22:53.80:531,54,0	1/1:2,16:18:41.82:427,42,0	1/1:3,15:19:45.03:444,45,0	1/1:2,21:26:68.34:646,68,0	1/1:4,8:10:24.05:244,24,0
chr10	26310184	.	C	CAAA	1819.97	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=-7.055;DP=559;FS=0.640;HRun=8;HaplotypeScore=76.4691;InbreedingCoeff=0.7810;MQ=79.18;MQ0=0;MQRankSum=-2.310;QD=33.70;ReadPosRankSum=-3.602;VQSLOD=2.0093;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:57.18:0,57,749	0/0:8,0:8:24.08:0,24,315	0/0:17,0:18:29.67:0,30,324	0/1:10,0:9:18.40:18,0,171	0/0:36,0:36:99:0,99,1271	0/0:21,0:21:60.16:0,60,755	0/0:15,0:15:36.10:0,36,473	1/1:7,16:25:63.20:1143,63,0	0/0:19,0:19:54.17:0,54,708	0/0:21,0:21:54.14:0,54,682	0/0:23,0:23:60.19:0,60,789	0/0:21,0:21:60.19:0,60,788	0/0:18,0:18:54.18:0,54,708	0/0:31,0:31:87.26:0,87,1132	0/0:24,0:24:69.21:0,69,892	0/0:15,0:15:36.09:0,36,459	1/1:4,15:19:39.13:788,39,0	0/0:14,0:14:36.07:0,36,455	0/0:19,0:19:45.06:0,45,543	0/0:29,0:29:81.24:0,81,1063	0/0:10,0:10:30.10:0,30,394	0/0:23,0:23:63.15:0,63,784	0/0:23,0:23:60.16:0,60,773	0/0:20,0:20:54.17:0,54,710	0/0:22,0:22:63.18:0,63,814	0/0:15,0:15:45.14:0,45,578	0/0:31,0:31:81.20:0,81,1034	0/0:9,0:9:24.06:0,24,315
chr10	26311146	.	TAATATATC	T	1987.99	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.770;DP=593;FS=6.419;HRun=0;HaplotypeScore=147.0764;InbreedingCoeff=0.9974;MQ=80.07;MQ0=0;MQRankSum=-6.588;QD=56.80;ReadPosRankSum=-2.682;VQSLOD=2.5796;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:75.24:0,75,3241	0/0:13,0:13:39.13:0,39,1701	0/0:19,0:19:57.20:0,57,2329	0/0:12,0:12:30.10:0,30,1138	0/0:25,0:25:75.24:0,75,3091	0/0:20,0:20:60.21:0,60,2638	0/0:21,0:21:57.20:0,57,2455	1/1:5,19:24:57.16:1507,57,0	0/0:29,0:29:84.29:0,84,3740	0/0:30,0:30:87.30:0,87,3836	0/0:32,0:32:93.32:0,93,3945	0/0:18,0:18:54.19:0,54,2374	0/0:22,0:22:60.21:0,60,2606	0/0:26,0:26:75.26:0,75,3138	0/0:15,0:15:45.15:0,45,1998	0/0:26,0:26:75.26:0,75,3223	1/1:0,11:11:21.07:601,21,0	0/0:24,0:24:66.23:0,66,2811	0/0:24,0:24:66.23:0,66,2913	0/0:34,0:34:99:0,99,4295	0/0:15,0:15:45.15:0,45,1915	0/0:25,0:25:75.24:0,75,3204	0/0:14,0:14:42.14:0,42,1772	0/0:17,0:17:48.16:0,48,2090	0/0:27,0:26:81.28:0,81,3552	0/0:19,0:19:57.20:0,57,2531	0/0:14,0:14:36.02:0,36,1344	0/0:11,0:11:33.11:0,33,1473
chr10	26311193	.	AAACTCAC	A	1271.45	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.698;DP=524;FS=4.422;HRun=0;HaplotypeScore=124.2830;InbreedingCoeff=0.9860;MQ=83.48;MQ0=0;MQRankSum=-4.828;QD=52.98;ReadPosRankSum=-3.308;VQSLOD=3.0220;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:75.26:0,75,3008	0/0:12,0:12:33.11:0,33,1351	0/0:21,0:20:60.21:0,60,2092	0/0:19,0:18:36.32:0,36,1457	0/0:15,0:15:45.15:0,45,1843	0/0:18,0:18:54.17:0,54,2115	0/0:20,0:20:57.20:0,57,2318	1/1:3,14:17:42.13:1047,42,0	0/0:20,0:20:57.20:0,57,2311	0/0:26,0:26:78.27:0,78,3171	0/0:20,0:20:60.21:0,60,2451	0/0:20,0:20:60.17:0,60,2357	0/0:20,0:20:60.21:0,60,2378	0/0:22,0:22:63.22:0,63,2578	0/0:23,0:23:69.24:0,69,2811	0/0:34,0:34:96.33:0,96,3933	1/1:2,5:7:15.01:343,15,0	0/0:18,0:17:48.16:0,48,1922	0/0:22,0:22:66.23:0,66,2641	0/0:22,0:22:66.23:0,66,2678	0/0:21,0:21:63.22:0,63,2435	0/0:11,0:11:30.10:0,30,1155	0/0:8,0:8:18.06:0,18,736	0/0:20,0:20:57.20:0,57,2241	0/0:23,0:23:66.23:0,66,2623	0/0:21,0:21:60.21:0,60,2459	0/0:9,0:9:27.09:0,27,1082	0/0:9,0:9:27.09:0,27,1106
chr10	26311247	.	T	TCCAC	1286.47	PASS	AB=0.815;AC=19;AF=0.339;AN=56;BaseQRankSum=5.636;DP=518;FS=12.634;HRun=0;HaplotypeScore=114.6858;InbreedingCoeff=-0.5326;MQ=65.23;MQ0=2;MQRankSum=-0.295;QD=3.73;ReadPosRankSum=-2.593;VQSLOD=0.8763;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:28:78.52:79,0,287	0/1:5,0:12:30.58:31,0,66	0/0:23,0:16:37.13:0,37,388	0/0:30,0:22:56.09:0,56,575	0/1:10,0:18:20.83:21,0,142	0/1:9,0:16:69.48:69,0,98	0/0:9,0:14:20.57:0,21,150	0/0:26,0:26:71.49:0,71,593	0/1:12,4:25:92.58:93,0,120	0/1:10,0:12:99:107,0,151	0/1:16,0:21:12.49:12,0,202	0/1:9,2:16:43.28:43,0,198	0/0:7,0:12:14.97:0,15,123	0/1:15,2:26:13.35:13,0,200	0/0:15,0:25:32.89:0,33,267	0/0:20,0:28:8.93:0,9,371	0/0:2,0:2:2.94:0,3,18	0/1:14,1:18:99:143,0,124	0/1:13,0:13:4.80:5,0,180	0/1:9,1:13:47.03:47,0,103	0/1:22,0:22:49.68:50,0,248	0/0:13,0:13:2.75:0,3,127	0/1:4,2:12:72.55:73,0,80	0/1:24,0:24:99:215,0,237	0/1:20,0:20:99:166,0,154	0/1:7,0:14:99:164,0,152	0/1:20,0:20:77.06:77,0,120	0/1:13,0:12:34.96:35,0,130
chr10	26315982	.	GGTGTGT	G	3020.03	PASS	AB=0.680;AC=42;AF=0.808;AN=52;BaseQRankSum=-0.274;DP=444;FS=19.172;HRun=0;HaplotypeScore=90.0587;InbreedingCoeff=0.2295;MQ=71.99;MQ0=18;MQRankSum=-0.675;QD=8.99;ReadPosRankSum=-0.030;VQSLOD=0.7346;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:17,11:26:3.48:61,3,0	0/1:1,3:4:11.97:55,0,12	./.	./.	1/1:9,5:14:11.99:167,12,0	0/1:14,10:22:14.80:171,0,15	0/1:9,5:15:14.95:93,0,15	0/0:16,0:15:5.98:0,6,72	1/1:10,3:13:9.03:182,9,0	1/1:8,6:14:14.86:213,15,0	1/1:6,7:13:12:201,12,0	1/1:5,0:9:2.74:12,3,0	1/1:12,5:17:6.02:122,6,0	1/1:10,2:12:11.99:171,12,0	0/0:11,0:11:3.01:0,3,39	1/1:9,4:13:3.01:61,3,0	0/0:18,0:19:24.08:0,24,547	0/1:10,6:14:50.68:55,0,51	1/1:10,1:11:3.01:61,3,0	1/1:7,4:11:15:258,15,0	1/1:16,0:14:8.92:104,9,0	1/1:2,3:6:8.99:123,9,0	1/1:8,3:11:6.02:122,6,0	1/1:16,10:25:1.83:4,2,0	1/1:8,7:16:18.06:340,18,0	1/1:12,5:17:18.06:345,18,0	1/1:14,3:16:3.16:61,3,0	1/1:5,6:11:9.92:184,10,0
chr10	26317708	.	TTG	T	7508.75	PASS	AB=0.710;AC=45;AF=0.833;AN=54;BaseQRankSum=-1.699;DP=534;FS=15.802;HRun=0;HaplotypeScore=78.1805;InbreedingCoeff=0.5343;MQ=62.52;MQ0=7;MQRankSum=3.462;QD=16.25;ReadPosRankSum=4.977;VQSLOD=3.6475;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:13,10:23:4.55:316,0,5	1/1:0,4:4:6.02:68,6,0	0/0:17,0:12:3.01:0,3,44	./.	1/1:5,10:15:27.08:305,27,0	1/1:9,12:22:27.04:292,27,0	1/1:9,5:16:11.70:96,12,0	0/0:25,0:25:38.11:0,38,426	1/1:4,11:15:30.09:339,30,0	1/1:13,17:31:50.81:537,51,0	1/1:10,16:26:45.09:495,45,0	1/1:9,6:15:24.06:262,24,0	1/1:7,8:15:26.91:285,27,0	1/1:5,7:13:18.35:185,18,0	1/1:6,1:19:31.42:174,31,0	1/1:8,12:21:35.93:387,36,0	0/0:6,0:13:14.99:0,15,129	0/1:9,3:13:21.29:86,0,21	0/1:9,8:17:17.58:244,0,18	1/1:12,17:28:48.12:534,48,0	1/1:15,10:25:26.91:285,27,0	1/1:2,12:14:30.08:339,30,0	1/1:13,14:27:40:443,40,0	1/1:4,7:11:19.30:207,19,0	1/1:10,11:23:32.76:333,33,0	1/1:10,12:21:35.93:387,36,0	1/1:14,15:31:50.81:537,51,0	1/1:2,11:13:33.09:373,33,0
chr10	26324323	.	C	CAGAG	3123.97	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-5.623;DP=642;FS=0.000;HRun=0;HaplotypeScore=103.3747;InbreedingCoeff=0.9902;MQ=63.11;MQ0=0;MQRankSum=-4.779;QD=52.95;ReadPosRankSum=-4.998;VQSLOD=2.8806;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:37:96.78:0,97,1677	0/0:11,0:11:27.09:0,27,485	0/0:20,0:18:50.32:0,50,888	0/0:33,0:29:63.20:0,63,1058	0/0:33,0:33:93.29:0,93,1612	0/0:24,0:24:69.22:0,69,1210	0/0:16,0:16:39.12:0,39,671	1/1:18,16:40:96.26:2099,96,0	0/0:22,0:22:63.20:0,63,1103	0/0:28,0:28:75.25:0,75,1315	0/0:32,0:32:90.30:0,90,1577	0/0:27,0:27:75.26:0,75,1343	0/0:26,0:26:66.23:0,66,1180	0/0:22,0:22:60.19:0,60,1045	0/0:20,0:20:60.21:0,60,1078	0/0:17,0:17:45.15:0,45,782	1/1:3,15:19:45.15:1147,45,0	0/0:22,0:22:54.16:0,54,939	0/0:18,0:18:33.11:0,33,593	0/0:19,0:19:51.16:0,51,888	0/0:29,0:29:75.26:0,75,1341	0/0:17,0:17:45.15:0,45,809	0/0:19,0:19:51.17:0,51,916	0/0:8,0:8:24.08:0,24,431	0/0:19,0:19:57.15:0,57,963	0/0:25,0:25:63.22:0,63,1128	0/0:27,0:27:72.25:0,72,1293	0/0:12,0:12:15.05:0,15,269
chr10	26327144	.	G	GGGCA	382.35	PASS	AC=24;AF=1.000;AN=24;DP=39;FS=0.000;HRun=0;HaplotypeScore=68.5023;InbreedingCoeff=-0.1281;MQ=24.98;MQ0=0;QD=11.95;VQSLOD=2.6660;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,1:1:2.99:23,3,0	1/1:0,4:1:2.98:22,3,0	./.	./.	1/1:0,3:1:2.92:17,3,0	1/1:0,1:1:2.99:24,3,0	./.	./.	1/1:0,1:1:2.99:24,3,0	./.	./.	1/1:0,2:2:5.98:46,6,0	./.	./.	1/1:0,3:3:8.94:65,9,0	./.	./.	./.	./.	1/1:0,4:2:5.96:43,6,0	./.	./.	1/1:0,4:2:5.93:39,6,0	./.	./.	1/1:0,3:2:5.74:38,6,0	1/1:0,4:3:9.01:86,9,0	1/1:0,2:1:3:27,3,0
chr10	26332158	.	T	TA	563.77	PASS	AB=0.947;AC=7;AF=0.135;AN=52;BaseQRankSum=4.557;DP=576;FS=1.292;HRun=10;HaplotypeScore=55.4024;InbreedingCoeff=0.6169;MQ=47.98;MQ0=62;MQRankSum=-4.046;QD=5.47;ReadPosRankSum=-0.769;VQSLOD=0.6909;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,1:28:26.13:0,26,350	0/0:3,0:4:5.09:0,5,47	./.	./.	0/0:25,0:24:16.28:0,16,291	0/0:26,0:27:32.26:0,32,379	0/0:18,0:15:14.97:0,15,123	1/1:22,0:8:0.97:28,1,0	0/0:24,0:24:2.08:0,2,277	0/0:19,0:18:22.36:0,22,279	0/1:17,1:17:15.44:15,0,228	0/0:9,0:9:17.98:0,18,148	0/0:18,0:18:19.95:0,20,297	0/0:25,0:25:28.37:0,28,350	1/1:4,23:27:39.07:405,39,0	0/0:17,0:17:29.95:0,30,246	1/1:3,3:24:42.98:249,43,0	0/0:10,0:9:20.95:0,21,168	0/0:21,0:8:23.97:0,24,197	0/0:28,0:26:50.88:0,51,416	0/0:23,0:23:56.89:0,57,463	0/0:30,0:28:36.23:0,36,423	0/0:22,0:21:18.27:0,18,275	0/0:15,1:16:6.92:0,7,255	0/0:17,0:17:32.95:0,33,271	0/0:16,1:17:12.93:0,13,313	0/0:25,0:27:60.97:0,61,480	0/0:7,0:7:8.95:0,9,74
chr10	26333437	.	GCACACACA	G	12849.23	PASS	AB=0.719;AC=46;AF=0.821;AN=56;BaseQRankSum=4.251;DP=467;FS=1.613;HRun=0;HaplotypeScore=136.4919;InbreedingCoeff=0.6076;MQ=56.84;MQ0=4;MQRankSum=-3.173;QD=35.20;ReadPosRankSum=5.282;VQSLOD=4.4886;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:11,3:13:15.92:144,0,16	1/1:3,0:3:3.01:74,3,0	0/0:29,0:18:16.30:0,16,371	0/0:34,0:24:18.03:0,18,380	1/1:5,21:27:39.13:918,39,0	1/1:4,11:17:39.03:915,39,0	1/1:6,3:9:9.03:230,9,0	0/0:27,0:27:36.12:0,36,1205	1/1:5,7:12:24.08:614,24,0	1/1:19,7:26:15.14:382,15,0	1/1:5,14:19:36.12:860,36,0	1/1:4,10:14:30.10:764,30,0	1/1:4,8:14:27.09:643,27,0	1/1:4,9:13:15.05:383,15,0	1/1:6,0:15:29.93:518,30,0	1/1:5,9:15:30.10:746,30,0	0/0:10,0:12:9.03:0,9,321	1/1:7,1:9:1.82:53,2,0	1/1:10,6:16:18.06:350,18,0	1/1:5,15:21:39.13:974,39,0	1/1:7,3:10:3.01:77,3,0	1/1:2,8:10:21.54:537,22,0	1/1:9,13:22:32.85:756,33,0	1/1:5,4:9:9.03:230,9,0	1/1:6,10:17:24.08:571,24,0	0/1:9,14:24:22.57:1076,0,23	1/1:11,10:21:24.08:594,24,0	1/1:1,6:8:18.06:440,18,0
chr10	26333527	.	C	CA	1144.25	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=3.340;DP=510;FS=4.289;HRun=8;HaplotypeScore=63.6547;InbreedingCoeff=0.9929;MQ=74.57;MQ0=0;MQRankSum=-2.369;QD=19.73;ReadPosRankSum=-2.047;VQSLOD=2.9450;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:33.02:0,33,302	0/0:6,0:6:18.01:0,18,165	0/0:11,0:11:23.99:0,24,213	0/0:16,0:16:42:0,42,374	0/0:33,0:33:90.03:0,90,819	0/0:28,0:28:63.03:0,63,577	0/0:12,0:12:33.02:0,33,302	1/1:28,0:28:64.43:388,64,0	0/0:18,0:18:54.03:0,54,494	0/0:21,0:22:59.04:0,59,521	0/0:29,0:29:81.04:0,81,741	0/0:11,0:11:27:0,27,247	0/0:21,0:21:51.02:0,51,467	0/0:22,0:22:42.01:0,42,384	1/1:0,19:19:57.17:658,57,0	0/0:12,0:12:30.01:0,30,275	1/1:11,0:11:29.90:242,30,0	0/0:15,0:15:36.02:0,36,329	0/0:15,0:15:36.01:0,36,329	0/0:24,0:24:60.03:0,60,549	0/0:11,0:11:27:0,27,242	0/0:8,0:8:21.01:0,21,192	0/0:19,0:19:48.02:0,48,439	0/0:16,0:16:45.02:0,45,412	0/0:24,1:25:25.40:0,25,487	0/0:17,0:18:44.05:0,44,390	0/0:36,0:36:99:0,99,906	0/0:12,0:12:33.02:0,33,302
chr10	26333532	.	A	AC	1583.05	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-0.970;DP=516;FS=3.921;HRun=0;HaplotypeScore=56.8083;InbreedingCoeff=0.9949;MQ=78.86;MQ0=0;MQRankSum=-3.317;QD=26.83;ReadPosRankSum=-1.915;VQSLOD=3.5908;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:33.11:0,33,460	0/0:6,0:6:18.06:0,18,251	0/0:14,0:14:36.11:0,36,476	0/0:18,0:18:51.15:0,51,665	0/0:31,0:31:93.27:0,93,1276	0/0:24,0:24:72.15:0,72,946	0/0:12,0:12:36.11:0,36,487	1/1:0,29:29:84.20:1115,84,0	0/0:19,0:19:57.16:0,57,775	0/0:23,0:23:69.11:0,69,899	0/0:32,0:32:90.27:0,90,1209	0/0:11,0:11:33.04:0,33,419	0/0:21,0:21:60.11:0,60,777	0/0:22,0:22:51.07:0,51,652	1/1:19,0:19:45.07:160,45,0	0/0:12,0:12:33.08:0,33,440	1/1:1,10:11:33:451,33,0	0/0:14,0:14:36.12:0,36,502	0/0:14,0:14:42.06:0,42,544	0/0:23,0:23:69.17:0,69,910	0/0:10,0:10:30.06:0,30,396	0/0:8,0:8:21.07:0,21,293	0/0:20,0:20:54.09:0,54,710	0/0:16,0:16:48.12:0,48,648	0/0:28,0:28:64.75:0,65,892	0/0:18,0:18:54.01:0,54,674	0/0:37,0:37:99:0,99,1383	0/0:12,0:12:33.11:0,33,461
chr10	26333591	.	T	TA	886.42	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-5.106;DP=486;FS=3.332;HRun=9;HaplotypeScore=48.4137;InbreedingCoeff=0.9061;MQ=76.31;MQ0=0;MQRankSum=1.385;QD=22.16;ReadPosRankSum=-3.262;VQSLOD=3.1575;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:3.97:0,4,208	0/0:8,0:8:24:0,24,208	0/0:9,0:9:17.99:0,18,155	0/0:14,0:14:16.47:0,16,153	0/0:29,0:29:74.98:0,75,651	0/0:23,0:23:47.94:0,48,412	0/0:12,0:12:32.99:0,33,286	1/1:5,20:25:63.13:676,63,0	0/0:19,0:19:47.97:0,48,413	0/0:21,0:21:50.97:0,51,443	0/0:28,0:28:65.92:0,66,562	0/0:15,0:15:35.99:0,36,312	0/0:21,0:21:56.97:0,57,495	0/0:20,0:20:44.97:0,45,391	0/0:19,0:19:56.99:0,57,495	0/0:9,0:9:20.99:0,21,182	1/1:4,11:15:30.08:332,30,0	0/0:13,0:13:32.96:0,33,280	0/0:14,0:14:35.98:0,36,313	0/0:23,0:23:68.99:0,69,599	0/0:8,0:8:24:0,24,208	0/0:8,0:8:14.98:0,15,130	0/0:19,0:19:53.99:0,54,468	0/0:12,0:12:26.94:0,27,227	0/0:27,0:27:65.98:0,66,573	0/0:22,0:22:50.96:0,51,443	0/0:34,0:34:89.90:0,90,764	0/0:9,0:9:23.99:0,24,208
chr10	26334915	.	A	AT	1365.18	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-8.321;DP=505;FS=6.973;HRun=8;HaplotypeScore=61.6586;InbreedingCoeff=0.9906;MQ=90.38;MQ0=0;MQRankSum=-3.489;QD=27.86;ReadPosRankSum=-3.202;VQSLOD=2.9094;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:54.03:0,54,494	0/0:7,0:7:18:0,18,165	0/0:19,0:19:41.92:0,42,452	0/0:22,0:22:41.94:0,42,373	0/0:17,0:17:48.02:0,48,439	0/0:27,0:27:57.01:0,57,521	0/0:14,0:14:36.02:0,36,330	1/1:4,35:39:99:1189,105,0	0/0:22,0:22:51.02:0,51,467	0/0:21,0:21:57.03:0,57,522	0/0:23,0:23:60.02:0,60,549	0/0:17,0:17:51:0,51,458	0/0:18,0:18:45.02:0,45,412	0/0:23,0:23:63.02:0,63,572	0/0:17,0:17:39.01:0,39,352	0/0:12,0:12:27:0,27,246	1/1:2,8:10:27.05:298,27,0	0/0:8,0:8:20.50:0,21,173	0/0:24,0:24:63.03:0,63,577	0/0:19,0:19:54.03:0,54,494	0/0:11,0:11:30.01:0,30,274	0/0:13,0:13:36.01:0,36,329	0/0:17,0:17:41.92:0,42,384	0/0:9,0:9:24.01:0,24,220	0/0:14,0:14:33.02:0,33,302	0/0:22,0:22:51.02:0,51,467	0/0:27,0:27:63.03:0,63,577	0/0:12,0:12:36.02:0,36,329
chr10	26334970	.	A	AT	9833.99	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-10.570;DP=504;FS=1.841;HRun=10;HaplotypeScore=56.2663;InbreedingCoeff=0.9444;MQ=75.66;MQ0=0;MQRankSum=-0.547;QD=22.30;ReadPosRankSum=4.038;VQSLOD=5.6519;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,13:17:41.77:411,42,0	1/1:1,6:7:15.04:160,15,0	0/0:8,0:8:16.67:0,17,118	0/0:11,0:11:11.06:0,11,52	1/1:4,27:33:83.60:806,84,0	1/1:4,25:29:69:711,69,0	1/1:2,14:16:29.94:303,30,0	0/0:12,0:30:53.43:0,53,155	1/1:3,18:21:52.01:546,52,0	1/1:4,13:17:14.45:359,14,0	1/1:2,18:22:56.90:565,57,0	1/1:3,10:13:27.07:288,27,0	1/1:1,13:15:29.91:302,30,0	1/1:4,17:21:42.11:448,42,0	1/1:2,0:18:34.09:171,34,0	1/1:0,16:16:42.11:448,42,0	0/0:1,0:14:22.40:0,22,66	1/1:3,8:11:9.02:96,9,0	1/1:5,12:17:14.43:351,14,0	1/1:3,23:27:41.25:594,41,0	1/1:1,10:11:24.06:256,24,0	1/1:2,12:14:11.45:327,11,0	1/1:2,16:18:42.07:435,42,0	1/1:3,15:19:41.97:430,42,0	1/1:1,11:12:27.07:288,27,0	1/1:3,21:24:58.38:604,58,0	1/1:7,23:30:32.50:551,33,0	1/1:0,12:12:36.09:384,36,0
chr10	26335543	.	TAAC	T	343.05	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.127;DP=493;FS=0.000;HRun=0;HaplotypeScore=77.4871;InbreedingCoeff=0.7609;MQ=63.09;MQ0=9;MQRankSum=-3.899;QD=9.80;ReadPosRankSum=-3.679;VQSLOD=1.9527;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:51.17:0,51,975	0/0:2,0:2:3.01:0,3,60	0/0:27,0:13:12.02:0,12,190	0/0:38,0:23:5:0,5,280	0/0:22,0:22:36.11:0,36,679	0/0:11,0:11:9.03:0,9,179	0/0:13,0:13:27.09:0,27,475	1/1:17,7:24:21.06:274,21,0	0/0:17,0:17:30.10:0,30,595	0/0:20,0:20:45.15:0,45,854	0/0:15,0:15:27.09:0,27,535	0/0:17,0:17:42.11:0,42,765	0/0:13,0:13:27.09:0,27,530	0/0:17,0:17:30.10:0,30,595	0/0:26,0:26:57.18:0,57,1096	0/0:28,1:29:21.72:0,22,1139	1/1:2,9:11:15.01:186,15,0	0/0:3,0:3:6.02:0,6,119	0/0:10,0:9:12.01:0,12,200	0/0:21,0:21:48.16:0,48,952	0/0:22,0:22:42.14:0,42,810	0/0:15,0:15:33.11:0,33,655	0/0:6,0:22:36.12:0,36,473	0/0:12,0:12:27.09:0,27,492	0/0:13,0:13:30.10:0,30,595	0/0:23,0:23:48.16:0,48,919	0/0:16,0:16:30.10:0,30,587	0/0:8,0:8:14.97:0,15,220
chr10	26335591	.	AACACAC	A	36.05	PASS	AC=4;AF=0.077;AN=52;BaseQRankSum=2.941;DP=630;FS=2.067;HRun=0;HaplotypeScore=135.1826;InbreedingCoeff=0.3291;MQ=45.85;MQ0=23;MQRankSum=-2.431;QD=0.88;ReadPosRankSum=-2.953;VQSLOD=2.0020;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:27:15.17:0,15,198	0/0:6,0:6:2.48:0,2,52	./.	./.	0/0:25,0:25:9.03:0,9,207	0/0:18,0:18:6:0,6,186	0/0:16,0:16:10.67:0,11,249	0/0:13,0:20:2.80:0,3,14	0/0:19,0:19:20.10:0,20,508	0/0:26,0:26:23.32:0,23,508	0/0:8,0:8:5.58:0,6,152	0/0:20,0:19:5.96:0,6,45	0/0:15,0:15:14.13:0,14,216	0/0:14,0:14:8.44:0,8,81	1/1:16,12:28:8.71:91,9,0	0/0:22,0:22:8.86:0,9,206	1/1:12,0:13:2.80:42,3,0	0/0:5,0:3:3.88:0,4,26	0/0:22,0:22:12.04:0,12,256	0/0:20,0:20:4.56:0,5,104	0/0:28,0:25:16.55:0,17,396	0/0:12,0:11:6.02:0,6,186	0/0:17,0:17:6.32:0,6,123	0/0:15,0:14:2.85:0,3,92	0/0:19,0:18:7.73:0,8,124	0/0:18,0:17:18.72:0,19,337	0/0:15,0:14:4.97:0,5,75	0/0:4,0:10:6.02:0,6,151
chr10	26336896	.	AT	A	15068.74	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=7.515;DP=506;FS=23.961;HRun=1;HaplotypeScore=76.9014;InbreedingCoeff=0.9589;MQ=82.64;MQ0=0;MQRankSum=-5.034;QD=38.94;ReadPosRankSum=6.449;VQSLOD=2.7997;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,40:40:99:1424,102,0	1/1:0,4:4:9.03:126,9,0	0/0:22,0:22:58.58:0,59,885	0/0:22,0:22:66.19:0,66,984	1/1:0,18:18:54.18:754,54,0	1/1:0,22:22:63.21:880,63,0	1/1:0,25:25:66.22:921,66,0	0/0:25,0:25:75.24:0,75,1149	1/1:0,14:14:36.12:503,36,0	1/1:0,18:18:54.17:737,54,0	1/1:0,19:19:54.18:754,54,0	1/1:0,14:14:36.12:503,36,0	1/1:0,13:13:39.13:544,39,0	1/1:0,24:24:69.23:964,69,0	0/0:31,0:31:93.29:0,93,1428	1/1:0,13:13:39.13:545,39,0	0/0:19,0:19:57.19:0,57,905	1/1:0,2:2:6.02:84,6,0	1/1:0,15:15:44.79:553,45,0	1/1:0,21:21:54.18:754,54,0	1/1:0,21:21:60.20:838,60,0	1/1:0,5:5:15.05:210,15,0	1/1:0,8:8:24.08:335,24,0	1/1:0,24:24:72.24:1006,72,0	1/1:0,17:17:45.15:629,45,0	1/1:0,13:13:39.11:526,39,0	1/1:0,25:25:72.24:996,72,0	1/1:0,12:12:36.08:481,36,0
chr10	26337520	.	CTTTGTCTGAAGCGCTGCATCGGAGCTGAAAA	C	3221.60	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=5.750;DP=703;FS=9.351;HRun=0;HaplotypeScore=513.3062;InbreedingCoeff=0.9067;MQ=79.18;MQ0=0;MQRankSum=-6.077;QD=57.53;ReadPosRankSum=2.847;VQSLOD=-0.4761;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:96.33:0,96,11676	0/0:8,0:8:24.07:0,24,2069	0/0:26,0:26:75.26:0,75,5315	0/0:34,0:32:93.28:0,93,5623	0/0:28,0:28:84.27:0,84,9993	0/0:35,0:35:99:0,105,12747	0/0:19,0:19:54.17:0,54,5930	1/1:23,0:23:3:55,3,0	0/0:33,0:33:99:0,99,11034	0/0:28,0:28:84.27:0,84,8927	0/0:22,0:22:66.23:0,66,8034	0/0:32,0:32:90.31:0,90,11701	0/0:29,0:29:87.29:0,87,10116	0/0:22,0:22:66.23:0,66,7466	1/1:5,18:23:33.11:2548,33,0	0/0:27,0:27:81.26:0,81,9953	1/1:6,4:10:9.03:745,9,0	0/0:6,0:6:18.03:0,18,1814	0/0:24,0:24:72.24:0,72,6982	0/0:33,0:33:96.31:0,96,10872	0/0:35,0:35:99:0,105,11559	0/0:26,0:26:78.26:0,78,8993	0/0:25,0:25:75.26:0,75,9444	0/0:26,0:26:78.27:0,78,9674	0/0:27,0:27:81.28:0,81,10242	0/0:25,0:25:72.25:0,72,8587	0/0:36,0:36:99:0,105,13045	0/0:8,0:8:24.08:0,24,3456
chr10	26339722	.	TAAA	T	6945.34	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-9.455;DP=348;FS=4.299;HRun=12;HaplotypeScore=60.1319;InbreedingCoeff=0.8810;MQ=65.89;MQ0=2;MQRankSum=-2.953;QD=27.34;ReadPosRankSum=6.297;VQSLOD=3.5968;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,6:9:18.02:227,18,0	1/1:3,3:6:12.01:152,12,0	0/0:12,0:7:13.76:0,14,172	0/0:17,0:16:14.48:0,14,261	1/1:1,15:16:36.11:455,36,0	1/1:2,12:15:31.67:397,32,0	1/1:1,6:7:14.97:169,15,0	0/0:12,0:34:35.96:0,36,152	1/1:1,10:11:30.08:379,30,0	1/1:2,17:19:48.13:594,48,0	1/1:5,17:22:36.07:455,36,0	1/1:1,5:6:12.03:152,12,0	1/1:1,10:11:27.08:341,27,0	1/1:2,5:7:12.02:152,12,0	0/0:1,0:9:9.69:0,10,37	1/1:1,5:6:15.04:189,15,0	0/0:4,0:19:15.42:0,15,33	1/1:0,4:4:9.03:114,9,0	1/1:0,6:7:16.63:225,17,0	1/1:1,14:15:36.11:455,36,0	1/1:2,3:5:6.01:76,6,0	1/1:1,6:7:9.03:114,9,0	1/1:4,18:23:45.06:549,45,0	1/1:0,3:3:9.03:114,9,0	1/1:1,9:10:25.67:338,26,0	1/1:3,15:18:22.17:543,22,0	1/1:4,13:17:33.06:417,33,0	1/1:0,9:9:27.09:341,27,0
chr10	26362728	.	T	TCG	306.50	PASS	AC=16;AF=0.889;AN=18;BaseQRankSum=-2.647;DP=23;FS=0.000;HRun=0;HaplotypeScore=20.9862;MQ=30.86;MQ0=7;MQRankSum=-0.311;QD=20.43;ReadPosRankSum=-2.647;VQSLOD=2.8316;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,1:1:3.01:51,3,0	./.	./.	./.	./.	./.	./.	./.	1/1:1,1:1:3.01:49,3,0	./.	./.	1/1:0,2:2:6.02:85,6,0	1/1:2,1:2:1.79:9,2,0	./.	./.	1/1:0,2:2:6.02:98,6,0	1/1:2,0:2:2.96:19,3,0	./.	./.	./.	0/0:3,0:2:2.80:0,3,7	1/1:1,0:1:2.60:10,3,0	1/1:1,1:2:5.69:61,6,0	./.	./.	./.	./.	./.
chr10	26373465	.	AT	A	8036.29	PASS	AB=0.737;AC=23;AF=0.958;AN=24;BaseQRankSum=2.403;DP=601;FS=0.000;HRun=1;HaplotypeScore=315.4979;InbreedingCoeff=-0.1009;MQ=20.01;MQ0=277;MQRankSum=0.676;QD=17.90;ReadPosRankSum=-2.403;VQSLOD=3.0056;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,1:1:3.01:42,3,0	./.	./.	./.	1/1:10,51:45:69.16:929,69,0	./.	1/1:14,0:1:2.96:19,3,0	./.	./.	1/1:11,17:17:48.16:666,48,0	1/1:11,43:43:99:1269,99,0	./.	./.	./.	./.	./.	1/1:22,2:2:3.01:42,3,0	./.	./.	1/1:21,62:63:99:2148,171,0	./.	1/1:14,30:33:75.19:992,75,0	1/1:15,39:38:96.06:1229,96,0	./.	./.	1/1:15,7:7:21.07:293,21,0	1/1:15,2:3:3.01:40,3,0	0/1:18,10:15:59.26:368,0,59
chr10	26373503	.	CA	C	4213	PASS	AB=0.731;AC=15;AF=0.833;AN=18;BaseQRankSum=2.945;DP=511;FS=16.301;HRun=5;HaplotypeScore=475.7078;MQ=18.25;MQ0=285;MQRankSum=1.370;QD=14.14;ReadPosRankSum=2.504;VQSLOD=0.5474;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	1/1:17,27:30:54.15:609,54,0	./.	./.	./.	./.	1/1:17,6:9:12.03:136,12,0	1/1:21,24:37:69.19:775,69,0	./.	./.	./.	./.	./.	./.	./.	0/0:9,0:1:3.01:0,3,39	1/1:19,59:61:99:1495,132,0	./.	1/1:15,13:15:33.09:371,33,0	1/1:22,21:26:45.12:508,45,0	./.	./.	1/1:13,5:7:15.04:170,15,0	./.	0/1:12,7:9:60.92:149,0,61
chr10	26374336	.	TAAA	T	5162.68	PASS	AB=0.653;AC=42;AF=0.778;AN=54;BaseQRankSum=6.280;DP=283;FS=30.315;HRun=13;HaplotypeScore=66.1921;InbreedingCoeff=0.5836;MQ=32.44;MQ0=22;MQRankSum=-5.871;QD=22.64;ReadPosRankSum=-1.293;VQSLOD=1.2312;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,8:13:17.93:215,18,0	1/1:0,3:3:9.03:110,9,0	0/0:9,1:2:3.01:0,3,38	0/0:6,0:1:2.80:0,3,13	1/1:2,12:14:36:417,36,0	0/1:3,8:11:27:280,0,27	1/1:2,7:9:21.06:251,21,0	0/0:7,0:13:13.07:0,13,58	1/1:2,5:6:15.04:183,15,0	1/1:3,7:9:24.05:289,24,0	1/1:4,12:15:38.95:433,39,0	1/1:1,5:6:12.51:147,13,0	1/1:3,8:9:21.06:256,21,0	1/1:2,3:4:9.01:109,9,0	0/0:3,0:8:10.40:0,10,107	1/1:3,5:8:14.98:164,15,0	0/0:3,0:11:13.71:0,14,32	1/1:6,1:5:2.99:37,3,0	1/1:7,6:10:23.97:258,24,0	1/1:4,10:13:26.97:309,27,0	0/1:5,3:6:32.55:101,0,33	1/1:4,7:10:17.96:200,18,0	1/1:3,11:14:33.03:383,33,0	./.	1/1:3,13:13:36.11:438,36,0	1/1:3,5:7:15.02:182,15,0	1/1:2,12:14:29.94:365,30,0	1/1:3,1:1:3.01:36,3,0
chr10	26374358	.	C	CA	7084.92	PASS	AB=0.545;AC=45;AF=0.804;AN=56;BaseQRankSum=5.792;DP=340;FS=26.510;HRun=7;HaplotypeScore=69.9332;InbreedingCoeff=0.7903;MQ=52.66;MQ0=7;MQRankSum=-5.142;QD=27.15;ReadPosRankSum=1.816;VQSLOD=3.2099;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,14:17:21.54:265,22,0	1/1:0,3:3:9.03:113,9,0	0/0:18,0:5:8.59:0,9,75	0/0:11,0:5:0.63:0,1,51	1/1:0,17:17:42.13:527,42,0	0/1:2,9:12:0.39:296,0,0	1/1:3,7:10:15.05:189,15,0	0/0:25,0:24:57.11:0,57,580	1/1:1,6:7:15.05:189,15,0	1/1:0,15:15:45.14:564,45,0	1/1:4,17:21:51.16:642,51,0	1/1:1,10:11:21.07:264,21,0	1/1:2,9:11:24.08:302,24,0	1/1:1,3:4:9.03:112,9,0	0/0:11,0:11:24.05:0,24,244	1/1:0,10:10:24.08:302,24,0	0/0:14,0:13:39.09:0,39,398	1/1:2,4:6:8.86:113,9,0	1/1:1,15:15:45.14:566,45,0	1/1:3,12:14:33.11:415,33,0	1/1:0,6:6:15.05:189,15,0	1/1:2,9:11:24.08:302,24,0	1/1:4,9:13:33.11:414,33,0	1/1:1,4:5:9.03:113,9,0	1/1:3,12:13:36.12:453,36,0	1/1:2,6:8:18.06:226,18,0	1/1:2,15:17:32.74:415,33,0	1/1:1,7:7:9.03:113,9,0
chr10	26375474	.	TC	T	11446.81	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-5.257;DP=531;FS=16.795;HRun=8;HaplotypeScore=59.9240;InbreedingCoeff=0.9948;MQ=84.45;MQ0=0;MQRankSum=-6.224;QD=25.49;ReadPosRankSum=7.712;VQSLOD=3.1559;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,19:20:54.09:521,54,0	1/1:0,10:10:29.99:278,30,0	0/0:24,0:24:66.20:0,66,792	0/0:12,0:13:29.98:0,30,332	1/1:2,30:32:78.11:753,78,0	1/1:1,16:17:42.07:406,42,0	1/1:0,16:16:42.07:406,42,0	0/0:27,0:27:78.23:0,78,932	1/1:0,13:13:39.06:377,39,0	1/1:0,27:27:81.10:774,81,0	1/1:2,19:21:57.09:550,57,0	1/1:1,14:15:39.06:377,39,0	1/1:1,14:15:33.05:319,33,0	1/1:3,21:25:62.13:585,62,0	1/1:3,13:16:39.06:375,39,0	1/1:0,8:8:15.02:145,15,0	0/0:18,0:18:51.09:0,51,570	1/1:0,13:13:36.06:348,36,0	1/1:3,11:14:33.05:319,33,0	1/1:2,33:35:99:945,99,0	1/1:0,26:26:72.12:695,72,0	1/1:2,21:23:63.10:608,63,0	1/1:2,19:21:42.06:406,42,0	1/1:0,11:11:33.05:319,33,0	1/1:1,18:19:51.08:492,51,0	1/1:0,15:15:42.07:406,42,0	1/1:0,27:27:78.13:753,78,0	1/1:0,10:10:30.05:290,30,0
chr10	26377259	.	TA	T	1154.33	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.743;DP=472;FS=0.000;HRun=4;HaplotypeScore=42.7502;InbreedingCoeff=0.9831;MQ=71.10;MQ0=0;MQRankSum=-0.925;QD=31.20;ReadPosRankSum=-3.805;VQSLOD=1.8212;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:33.11:0,33,493	0/0:6,0:6:18.05:0,18,249	0/0:7,0:7:18.03:0,18,243	0/0:6,0:6:18.06:0,18,255	0/0:23,0:23:69.22:0,69,1012	0/0:32,0:32:93.15:0,93,1328	0/0:8,0:8:24.08:0,24,348	1/1:0,25:25:75.19:952,75,0	0/0:16,0:16:48.13:0,48,675	0/0:29,0:29:84.75:0,85,1243	0/0:32,0:32:96.26:0,96,1371	0/0:20,0:20:60.16:0,60,833	0/0:14,0:14:42.14:0,42,629	0/0:17,0:17:51.16:0,51,743	0/0:18,0:18:54.17:0,54,786	0/0:19,0:19:57.19:0,57,853	1/1:0,12:12:24.08:324,24,0	0/0:9,0:9:24.08:0,24,352	0/0:15,0:15:45.11:0,45,611	0/0:22,0:22:66.18:0,66,923	0/0:10,0:10:30.07:0,30,423	0/0:14,0:14:42.13:0,42,608	0/0:13,0:13:39.13:0,39,584	0/0:8,0:8:24.07:0,24,339	0/0:18,0:18:54.17:0,54,787	0/0:19,0:19:57.18:0,57,816	0/0:32,0:31:96.28:0,96,1369	0/0:17,0:17:51.17:0,51,762
chr10	26378804	.	GA	G	9555.61	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-5.157;DP=409;FS=2.264;HRun=7;HaplotypeScore=40.7976;InbreedingCoeff=0.8838;MQ=79.02;MQ0=1;MQRankSum=-4.506;QD=25.28;ReadPosRankSum=4.905;VQSLOD=4.7609;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,26:27:60.14:611,60,0	1/1:0,9:9:21.05:214,21,0	0/0:13,0:14:29.54:0,30,309	0/0:17,0:12:19.30:0,19,209	1/1:1,20:21:51.07:508,51,0	1/1:0,16:16:42.10:428,42,0	1/1:0,4:4:6.01:61,6,0	1/1:1,19:20:56.95:557,57,0	1/1:0,9:9:21.05:214,21,0	1/1:2,22:24:66.13:665,66,0	1/1:1,10:11:27.05:275,27,0	1/1:0,7:7:18.04:184,18,0	1/1:0,13:13:33.08:337,33,0	1/1:1,16:17:42.06:419,42,0	1/1:0,18:18:48.11:490,48,0	1/1:0,10:10:21.05:214,21,0	1/1:0,25:25:66.15:673,66,0	1/1:2,13:15:39.09:398,39,0	1/1:3,20:23:60.08:595,60,0	1/1:0,16:16:45.06:448,45,0	1/1:0,9:9:24.05:245,24,0	1/1:0,8:8:21.05:214,21,0	1/1:1,9:10:21.05:214,21,0	1/1:0,5:5:6.01:61,6,0	1/1:2,16:18:33.07:337,33,0	1/1:0,16:16:48.11:489,48,0	1/1:1,14:15:39.09:398,39,0	1/1:0,12:12:30.07:306,30,0
chr10	26379553	.	TTTTG	T	14867.58	PASS	AB=0.708;AC=50;AF=0.893;AN=56;BaseQRankSum=0.229;DP=648;FS=0.877;HRun=0;HaplotypeScore=115.4309;InbreedingCoeff=0.6205;MQ=65.17;MQ0=4;MQRankSum=4.958;QD=24.95;ReadPosRankSum=5.100;VQSLOD=4.3066;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,23:35:17.75:722,18,0	1/1:2,9:11:24.08:386,24,0	0/0:25,0:19:21.07:0,21,380	0/0:27,0:20:23.99:0,24,408	1/1:7,22:29:65.98:896,66,0	1/1:5,18:23:33.58:531,34,0	0/1:8,9:18:5.14:187,0,5	1/1:16,13:29:39.09:545,39,0	1/1:5,9:14:15.05:241,15,0	1/1:8,25:33:75.21:1111,75,0	1/1:8,17:24:48.12:715,48,0	1/1:4,16:19:33.04:530,33,0	1/1:12,16:28:41.93:662,42,0	1/1:6,21:27:45.15:723,45,0	1/1:4,0:19:30.03:279,30,0	1/1:4,8:12:21.07:337,21,0	1/1:10,17:27:41.81:636,42,0	0/1:6,3:9:28.70:121,0,29	1/1:9,3:12:9.03:139,9,0	1/1:8,17:25:51.13:763,51,0	1/1:11,6:16:12.04:193,12,0	1/1:9,20:29:54.14:826,54,0	1/1:10,16:26:34.57:574,35,0	1/1:5,17:23:39.13:624,39,0	1/1:5,19:24:54.18:866,54,0	1/1:7,20:26:57.16:862,57,0	1/1:11,28:38:72.16:1155,72,0	1/1:5,8:14:15.05:241,15,0
chr10	26383062	.	CAT	C	2012.03	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.726;DP=734;FS=1.075;HRun=0;HaplotypeScore=92.0496;InbreedingCoeff=0.9991;MQ=61.24;MQ0=5;MQRankSum=1.311;QD=29.59;ReadPosRankSum=-3.542;VQSLOD=3.9185;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:31:57.25:0,57,1116	0/0:11,0:11:33.11:0,33,617	0/0:28,0:21:54.52:0,55,845	0/0:34,0:23:57.38:0,57,911	0/0:27,0:27:81.21:0,81,1374	0/0:24,0:24:66.15:0,66,1193	0/0:23,0:23:63.17:0,63,1083	1/1:3,37:40:99:1327,105,0	0/0:20,0:20:60.15:0,60,1025	0/0:30,0:30:90.30:0,90,1656	0/0:26,0:26:78.25:0,78,1425	0/0:19,0:19:57.20:0,57,1047	0/0:31,0:31:93.26:0,93,1612	0/0:22,0:22:63.16:0,63,1053	0/0:31,0:31:93.32:0,93,1738	0/0:37,0:37:99:0,107,1881	1/1:3,25:27:57.02:806,57,0	0/0:13,0:13:26.67:0,27,416	0/0:21,0:21:63.19:0,63,1118	0/0:42,0:42:99:0,123,2157	0/0:34,0:34:99:0,102,1866	0/0:12,0:12:33.09:0,33,548	0/0:23,0:23:69.22:0,69,1256	0/0:34,0:34:93.30:0,93,1694	0/0:23,0:23:66.20:0,66,1171	0/0:24,0:24:72.24:0,72,1316	0/0:33,0:32:99:0,99,1802	0/0:12,0:12:36.03:0,36,601
chr10	26384195	.	T	TAC	2429.02	PASS	AB=1.000;AC=5;AF=0.096;AN=52;BaseQRankSum=-7.161;DP=267;FS=5.940;HRun=0;HaplotypeScore=68.4506;InbreedingCoeff=0.5630;MQ=67.78;MQ0=6;MQRankSum=3.425;QD=33.74;ReadPosRankSum=-4.459;VQSLOD=4.0263;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:17:42.12:0,42,611	0/0:2,0:2:2.88:0,3,46	0/1:10,0:5:0.81:2,0,1	0/0:30,0:13:15.84:0,16,108	0/0:11,0:11:16.58:0,17,338	0/0:15,0:15:36.58:0,37,529	0/0:4,0:4:12.04:0,12,183	1/1:3,37:40:99:1849,111,0	0/0:4,0:4:6.02:0,6,92	0/0:7,0:7:15.02:0,15,204	0/0:1,0:1:3.01:0,3,46	0/0:6,0:6:12.03:0,12,183	0/0:6,0:6:18.05:0,18,254	0/0:2,0:2:6.02:0,6,92	0/0:5,0:5:12.04:0,12,182	0/0:5,0:5:8.96:0,9,110	1/1:2,20:22:38.87:697,39,0	0/0:1,0:1:3.01:0,3,46	0/0:18,0:18:48.13:0,48,722	0/0:5,0:5:12.51:0,13,184	0/0:3,0:3:2.99:0,3,36	./.	0/0:3,0:3:6.01:0,6,92	./.	0/0:14,0:14:31.04:0,31,460	0/0:7,0:7:21.07:0,21,332	0/0:9,0:9:27.09:0,27,413	0/0:18,0:18:54.18:0,54,823
chr10	26384211	.	T	TATACATACATAC	11783.11	PASS	AC=46;AF=0.852;AN=54;BaseQRankSum=-3.855;DP=333;FS=3.558;HRun=0;HaplotypeScore=102.4497;InbreedingCoeff=0.5780;MQ=52.85;MQ0=6;MQRankSum=-1.448;QD=42.85;ReadPosRankSum=1.575;VQSLOD=4.6317;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:13,3:21:6.02:278,6,0	1/1:5,0:5:9.01:308,9,0	0/0:17,0:6:6:0,6,79	0/0:28,0:11:2.67:0,3,101	1/1:5,4:9:6.02:311,6,0	1/1:6,8:14:21.07:1188,21,0	1/1:9,0:9:12.01:299,12,0	1/1:39,0:38:45.11:1108,45,0	1/1:6,0:6:12.04:373,12,0	1/1:6,3:11:21.07:928,21,0	1/1:6,0:6:9.03:416,9,0	1/1:9,0:9:12.04:471,12,0	1/1:5,0:11:6.02:150,6,0	1/1:4,0:4:3.01:57,3,0	0/0:2,0:9:15.05:0,15,326	1/1:3,5:8:6.02:350,6,0	1/1:16,2:18:15.05:547,15,0	./.	1/1:21,5:26:30.20:985,30,0	1/1:4,6:10:6.02:336,6,0	0/0:3,0:3:3.01:0,3,30	1/1:5,0:5:9.03:382,9,0	1/1:6,0:6:9.03:345,9,0	1/1:4,0:4:8.99:211,9,0	1/1:5,10:15:27.09:1505,27,0	1/1:4,3:7:15.05:655,15,0	1/1:9,1:13:15.05:531,15,0	1/1:17,0:17:5.99:49,6,0
chr10	26390098	.	TG	T	1301.95	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.521;DP=550;FS=1.381;HRun=2;HaplotypeScore=140.8200;InbreedingCoeff=0.9949;MQ=85.45;MQ0=1;MQRankSum=-0.225;QD=35.19;ReadPosRankSum=-0.245;VQSLOD=3.0351;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,120,1860	0/0:6,0:6:18.06:0,18,288	0/0:29,0:25:33.32:0,33,945	0/0:30,0:29:65.49:0,65,947	0/0:17,0:17:48.16:0,48,756	0/0:19,0:19:57.19:0,57,906	0/0:24,0:24:58.41:0,58,856	1/1:0,16:16:48.16:670,48,0	0/0:16,0:16:45.12:0,45,670	0/0:14,0:14:39.13:0,39,620	0/0:14,0:14:32.89:0,33,526	0/0:16,0:16:48.16:0,48,757	0/0:17,0:17:51.14:0,51,762	0/0:21,0:21:63.17:0,63,939	0/0:14,0:14:36.11:0,36,551	0/0:12,0:12:36.11:0,36,547	1/1:0,21:21:54.18:754,54,0	0/0:14,0:14:42.14:0,42,669	0/0:19,0:19:51.64:0,52,794	0/0:21,0:21:60.12:0,60,955	0/0:25,0:25:63.21:0,63,989	0/0:16,0:16:42.13:0,42,632	0/0:22,0:22:54.18:0,54,853	0/0:36,0:35:92.81:0,93,1409	0/0:17,0:17:48.15:0,48,727	0/0:22,0:22:66.22:0,66,1022	0/0:19,0:19:54.18:0,54,859	0/0:9,0:9:27.09:0,27,431
chr10	26390146	.	GTGTGTGTGTGTGTGTGTGTGTC	G	4814.28	PASS	AB=0.993;AC=32;AF=0.593;AN=54;BaseQRankSum=3.505;DP=513;FS=3.590;HRun=0;HaplotypeScore=230.3431;InbreedingCoeff=-0.0989;MQ=42.96;MQ0=33;MQRankSum=-0.783;QD=12.13;ReadPosRankSum=-0.859;VQSLOD=3.7020;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:36,0:34:62.74:63,0,113	1/1:6,0:6:3.01:47,3,0	0/0:23,0:5:1.39:0,1,27	./.	1/1:10,0:8:8.73:59,9,0	1/1:18,0:18:18.03:267,18,0	1/1:16,0:15:4.82:33,5,0	0/0:9,0:7:1.25:0,1,3	0/1:15,0:15:65.59:66,0,151	0/1:26,1:25:29.52:321,0,30	1/1:11,0:10:3.48:119,3,0	1/1:18,1:18:17.71:546,18,0	0/1:16,0:16:6.97:210,0,7	1/1:12,1:12:11.97:251,12,0	0/0:18,0:18:33.03:0,33,1751	0/1:15,0:14:33.98:100,0,34	0/1:23,0:20:99:131,0,119	0/1:15,0:14:11.91:12,0,142	1/1:13,0:12:6.86:319,7,0	0/1:17,0:16:24.13:340,0,24	0/0:30,0:27:9.09:0,9,74	0/1:16,0:12:3.15:134,0,3	1/1:18,0:17:11.73:416,12,0	0/1:34,0:33:37.90:38,0,63	1/1:9,7:15:12.04:428,12,0	0/1:22,0:20:99:237,0,115	0/1:20,1:20:32.99:677,0,33	0/0:5,0:4:0.43:0,0,1
chr10	26390319	.	AG	A	1959.22	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.937;DP=568;FS=1.156;HRun=1;HaplotypeScore=57.3503;InbreedingCoeff=0.9967;MQ=75.05;MQ0=1;MQRankSum=1.151;QD=35.62;ReadPosRankSum=-1.385;VQSLOD=3.1884;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,151,2398	0/0:7,0:7:21.07:0,21,336	0/0:26,0:25:62.97:0,63,947	0/0:21,0:19:57.15:0,57,884	0/0:24,0:24:72.25:0,72,1146	0/0:16,0:16:45.15:0,45,719	0/0:25,0:25:75.22:0,75,1151	1/1:0,27:27:75.24:1032,75,0	0/0:16,0:16:48.16:0,48,761	0/0:18,0:17:54.18:0,54,864	0/0:21,0:21:63.20:0,63,984	0/0:17,0:17:51.17:0,51,815	0/0:12,0:12:36.12:0,36,575	0/0:14,0:14:42.14:0,42,666	0/0:16,0:16:48.15:0,48,744	0/0:14,0:14:42.14:0,42,672	1/1:0,28:28:75.25:1049,75,0	0/0:8,0:8:24.04:0,24,347	0/0:17,0:16:48.12:0,48,740	0/0:27,0:27:78.27:0,78,1240	0/0:24,0:24:66.20:0,66,1027	0/0:19,0:19:54.18:0,54,861	0/0:24,0:24:66.22:0,66,1045	0/0:15,0:15:42.14:0,42,671	0/0:17,0:17:51.17:0,51,816	0/0:19,0:19:57.19:0,57,890	0/0:30,0:30:87.28:0,87,1363	0/0:15,0:15:45.15:0,45,719
chr10	26390764	.	GTA	G	13181.77	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=9.695;DP=492;FS=6.370;HRun=0;HaplotypeScore=87.2810;InbreedingCoeff=0.9816;MQ=79.34;MQ0=0;MQRankSum=-5.690;QD=35.72;ReadPosRankSum=6.478;VQSLOD=7.0666;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,32:32:87.29:1214,87,0	1/1:3,10:13:27.09:370,27,0	0/0:23,0:23:63.22:0,63,1122	0/0:20,0:20:60.10:0,60,1008	1/1:0,12:12:36.12:504,36,0	1/1:1,16:17:45.15:630,45,0	1/1:2,25:27:69.23:966,69,0	0/0:28,0:28:72.25:0,72,1294	1/1:0,16:16:45.15:630,45,0	1/1:1,7:8:21.06:277,21,0	1/1:0,5:5:9.03:126,9,0	1/1:0,21:21:57.06:798,57,0	1/1:0,10:10:24.08:336,24,0	1/1:0,18:18:51.17:714,51,0	0/0:18,0:18:54.19:0,54,972	1/1:1,9:10:21.07:294,21,0	0/0:34,0:34:96.30:0,96,1686	1/1:1,22:23:57.19:798,57,0	1/1:2,17:19:51.17:714,51,0	1/1:1,9:10:27.09:378,27,0	1/1:0,13:13:33.11:462,33,0	1/1:1,14:15:30.10:419,30,0	1/1:2,7:9:18.06:252,18,0	1/1:1,17:18:45.15:630,45,0	1/1:1,17:19:51.17:713,51,0	1/1:0,22:22:63.18:862,63,0	1/1:1,18:19:48.16:672,48,0	1/1:0,13:13:30.10:420,30,0
chr10	26391195	.	G	GA	11903.67	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-10.641;DP=491;FS=0.000;HRun=7;HaplotypeScore=46.4447;InbreedingCoeff=0.9836;MQ=68.43;MQ0=0;MQRankSum=-0.814;QD=30.37;ReadPosRankSum=4.338;VQSLOD=4.6424;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,37:39:99:1268,105,0	1/1:0,7:7:14.80:181,15,0	0/0:12,0:12:27.02:0,27,254	0/0:14,0:13:26.84:0,27,232	1/1:3,16:19:48.04:545,48,0	1/1:6,23:30:61.34:822,61,0	1/1:3,18:21:28.21:623,28,0	0/0:32,0:32:81.11:0,81,773	1/1:3,9:12:21.06:254,21,0	1/1:0,11:11:33.10:399,33,0	1/1:2,11:13:24.03:274,24,0	1/1:1,16:17:48.15:580,48,0	1/1:1,21:23:60.18:723,60,0	1/1:2,7:9:18.06:217,18,0	0/0:12,0:12:33.04:0,33,312	1/1:2,13:15:39.12:471,39,0	0/0:28,1:29:47.52:0,48,714	1/1:2,17:19:51.16:616,51,0	1/1:4,22:26:69.18:818,69,0	1/1:2,13:15:39.12:471,39,0	1/1:2,32:34:93.29:1123,93,0	1/1:1,5:6:12.04:145,12,0	1/1:0,10:10:30.09:362,30,0	1/1:0,15:15:45.14:544,45,0	1/1:1,8:10:24.02:288,24,0	1/1:4,16:20:48.10:563,48,0	1/1:2,9:11:27.08:326,27,0	1/1:1,9:10:24.07:290,24,0
chr10	26391867	.	TC	T	14621.08	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=12.026;DP=548;FS=5.493;HRun=4;HaplotypeScore=132.7169;InbreedingCoeff=0.9615;MQ=77.68;MQ0=0;MQRankSum=-10.036;QD=31.99;ReadPosRankSum=3.958;VQSLOD=3.4226;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,15:19:44.85:502,45,0	1/1:1,5:6:15.05:180,15,0	0/0:27,1:27:75.06:0,75,975	0/0:11,0:11:32.11:0,32,403	1/1:2,31:33:90.28:1077,90,0	1/1:1,29:30:87.20:1015,87,0	1/1:3,16:19:54.14:624,54,0	0/0:27,0:27:78.25:0,78,1064	1/1:2,18:19:54.06:604,54,0	1/1:3,24:27:75.19:875,75,0	1/1:2,19:21:60.11:686,60,0	1/1:3,16:19:54.05:599,54,0	1/1:4,21:25:72.10:801,72,0	1/1:3,28:31:93.18:1061,93,0	0/0:21,0:21:63.21:0,63,882	1/1:2,22:24:69.20:817,69,0	0/0:4,0:4:12.04:0,12,166	1/1:0,13:12:36.11:431,36,0	1/1:3,16:19:48.09:558,48,0	1/1:1,22:23:66.20:791,66,0	1/1:0,3:2:6.02:72,6,0	1/1:6,16:22:60.15:685,60,0	1/1:3,16:19:51:573,51,0	1/1:1,8:9:15.05:180,15,0	1/1:2,14:16:45.07:509,45,0	1/1:2,19:21:63.19:745,63,0	1/1:5,21:26:72.18:830,72,0	1/1:2,10:12:36.07:407,36,0
chr10	26391899	.	AT	A	11958.31	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=9.988;DP=518;FS=8.904;HRun=7;HaplotypeScore=141.2590;InbreedingCoeff=0.9567;MQ=65.82;MQ0=1;MQRankSum=-7.152;QD=26.63;ReadPosRankSum=3.606;VQSLOD=3.2379;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,19:23:57.03:559,57,0	1/1:1,7:8:20.98:201,21,0	0/0:11,0:12:24.07:0,24,276	0/0:10,0:10:15.41:0,15,222	1/1:4,28:31:75.17:765,75,0	1/1:5,29:34:87.08:859,87,0	1/1:1,17:18:54.12:550,54,0	0/0:24,0:24:66.20:0,66,816	1/1:1,19:19:48.07:478,48,0	1/1:2,25:27:78.13:784,78,0	1/1:0,23:23:69.12:692,69,0	1/1:3,16:19:54.10:538,54,0	1/1:4,19:23:60.02:582,60,0	1/1:1,24:25:72.10:721,72,0	0/0:16,0:16:48.15:0,48,602	1/1:0,23:23:63.09:630,63,0	0/0:7,0:7:21.07:0,21,264	1/1:3,14:15:39.08:397,39,0	1/1:3,13:16:39.08:397,39,0	1/1:2,21:23:66.14:666,66,0	1/1:0,4:4:6.01:61,6,0	1/1:4,17:21:51.03:506,51,0	1/1:0,22:22:66.11:662,66,0	1/1:0,10:10:24.05:245,24,0	1/1:0,18:18:54.12:551,54,0	1/1:3,14:17:48.09:479,48,0	1/1:2,16:18:54.11:543,54,0	1/1:3,5:8:9.01:92,9,0
chr10	26392641	.	T	TGTGG	1406.97	PASS	AC=34;AF=0.739;AN=46;BaseQRankSum=4.426;DP=197;FS=0.835;HRun=0;HaplotypeScore=36.6980;InbreedingCoeff=0.5557;MQ=93.96;MQ0=2;MQRankSum=-5.346;QD=16.75;ReadPosRankSum=1.013;VQSLOD=2.9166;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,5:15:9.03:225,9,0	1/1:0,2:2:3.01:74,3,0	0/0:19,0:19:39.11:0,39,622	0/0:24,0:23:54.12:0,54,858	1/1:2,1:3:3.01:75,3,0	1/1:0,1:1:3.01:75,3,0	./.	0/0:15,0:15:33.09:0,33,505	./.	./.	0/0:4,0:4:2.74:0,3,12	1/1:1,0:1:3:25,3,0	1/1:5,0:5:12.01:121,12,0	1/1:4,0:6:6.47:56,6,0	0/0:20,0:20:48.12:0,48,762	1/1:6,0:6:3.01:69,3,0	0/0:20,0:20:51.13:0,51,855	1/1:4,5:9:3.01:75,3,0	1/1:2,1:3:3.01:75,3,0	1/1:3,1:4:6.02:148,6,0	1/1:9,0:8:6.47:65,6,0	./.	1/1:3,1:4:3.88:27,4,0	./.	1/1:3,2:5:6.02:150,6,0	1/1:5,1:6:12.02:204,12,0	1/1:4,0:4:2.99:24,3,0	1/1:0,1:1:3.01:75,3,0
chr10	26393910	.	T	TAA	22747.67	PASS	AB=1.000;AC=47;AF=0.839;AN=56;BaseQRankSum=11.627;DP=606;FS=9.221;HRun=1;HaplotypeScore=160.0823;InbreedingCoeff=0.8646;MQ=72.80;MQ0=0;MQRankSum=-8.149;QD=43.91;ReadPosRankSum=3.823;VQSLOD=4.1674;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,45:49:99:2029,117,0	1/1:0,14:14:35.97:612,36,0	0/0:20,0:19:51.10:0,51,675	0/0:20,0:20:32.48:0,32,722	1/1:2,30:32:72.02:1218,72,0	1/1:2,25:28:72.16:1290,72,0	1/1:0,13:13:36.12:678,36,0	0/1:24,0:24:21.47:21,0,196	1/1:0,25:25:69.24:1305,69,0	1/1:0,18:18:51.13:902,51,0	1/1:2,22:24:59.99:993,60,0	1/1:0,16:16:45.15:854,45,0	1/1:2,25:27:78.16:1371,78,0	1/1:0,19:19:48.12:874,48,0	0/0:28,0:28:84.27:0,84,1339	1/1:1,22:23:60.17:1100,60,0	0/0:19,0:19:30.15:0,30,271	1/1:0,11:12:33.11:619,33,0	1/1:1,15:16:48.11:837,48,0	1/1:0,28:29:81.01:1344,81,0	1/1:1,19:20:48.12:866,48,0	1/1:0,14:14:39.09:703,39,0	1/1:0,27:27:60.16:1099,60,0	1/1:0,8:9:15.05:283,15,0	1/1:0,18:18:48.12:875,48,0	1/1:1,20:21:63.16:1108,63,0	1/1:0,21:24:57.20:1088,57,0	1/1:0,13:15:36.12:678,36,0
chr10	26394355	.	T	TA	17815.96	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-2.600;DP=537;FS=26.342;HRun=4;HaplotypeScore=67.4230;InbreedingCoeff=0.9911;MQ=75.86;MQ0=1;MQRankSum=-5.399;QD=36.51;ReadPosRankSum=1.794;VQSLOD=2.8166;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,28:28:81.27:1108,81,0	1/1:0,8:8:24.08:328,24,0	0/0:13,1:13:32.56:0,33,298	0/0:15,0:15:17.15:0,17,197	1/1:0,23:23:69.23:944,69,0	1/1:2,24:26:72.24:985,72,0	1/1:1,12:13:36.12:492,36,0	1/1:3,32:35:96.28:1292,96,0	1/1:0,16:16:39.13:533,39,0	1/1:2,16:17:42.11:540,42,0	1/1:0,25:25:75.12:981,75,0	1/1:0,22:22:60.20:821,60,0	1/1:0,18:18:54.18:739,54,0	1/1:0,18:18:54.18:739,54,0	0/0:20,0:20:60.17:0,60,681	1/1:2,28:30:75.25:1026,75,0	1/1:1,18:19:48.16:656,48,0	1/1:1,14:15:39.13:533,39,0	1/1:3,15:18:45.10:579,45,0	1/1:0,25:25:72.13:941,72,0	1/1:0,9:8:21.07:287,21,0	1/1:1,17:18:51.17:698,51,0	1/1:0,10:10:21.07:287,21,0	1/1:0,11:11:33.11:451,33,0	1/1:1,19:20:45.15:616,45,0	1/1:1,20:21:60.18:803,60,0	1/1:2,31:33:84.28:1149,84,0	1/1:0,9:9:21.07:287,21,0
chr10	26394556	.	GTA	G	1995.39	PASS	AB=0.887;AC=40;AF=0.769;AN=52;BaseQRankSum=0.919;DP=218;FS=0.670;HRun=0;HaplotypeScore=43.0726;InbreedingCoeff=0.4669;MQ=69.58;MQ0=5;MQRankSum=-0.588;QD=14.56;ReadPosRankSum=1.870;VQSLOD=3.3903;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:15,1:16:26.63:260,27,0	1/1:3,0:3:3:25,3,0	0/0:11,0:7:4.54:0,5,26	0/0:13,0:5:3.01:0,3,38	1/1:1,5:6:5.94:41,6,0	1/1:7,0:7:6:52,6,0	1/1:4,0:4:9.91:109,10,0	0/0:27,0:26:69.22:0,69,1082	1/1:4,0:4:3:25,3,0	./.	1/1:8,0:8:15.01:155,15,0	1/1:7,0:7:12.03:146,12,0	1/1:4,0:4:9.03:117,9,0	1/1:4,0:4:6.01:67,6,0	0/0:3,0:3:9.03:0,9,140	./.	0/0:22,0:23:52.04:0,52,899	1/1:11,1:11:13.54:103,14,0	0/1:5,1:6:3.12:64,0,3	1/1:5,0:5:9.03:120,9,0	1/1:3,0:2:3:25,3,0	1/1:3,0:3:6.02:80,6,0	1/1:1,0:1:3:28,3,0	1/1:4,0:4:5.64:59,6,0	1/1:7,0:7:4.44:100,4,0	1/1:5,3:8:14.88:124,15,0	1/1:14,0:14:18.01:181,18,0	0/1:10,1:10:18.02:269,0,18
chr10	26394564	.	A	AT	780.88	PASS	AB=0.982;AC=32;AF=0.640;AN=50;BaseQRankSum=4.113;DP=188;FS=9.246;HRun=1;HaplotypeScore=45.4596;InbreedingCoeff=0.2271;MQ=58.40;MQ0=14;MQRankSum=0.390;QD=7.16;ReadPosRankSum=2.528;VQSLOD=0.2132;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:14:9.43:118,9,0	1/1:1,0:1:3:28,3,0	1/1:7,0:3:0.47:1,0,0	./.	0/1:5,0:5:0:0,0,0	1/1:6,0:5:5.82:66,6,0	1/1:5,0:4:5.93:61,6,0	0/0:33,0:28:2.10:0,2,509	./.	0/0:2,0:1:2.22:0,2,7	1/1:3,0:3:2.96:34,3,0	1/1:5,0:5:2.12:37,2,0	0/0:3,0:3:1.25:0,1,3	1/1:2,0:2:2.96:36,3,0	0/0:2,0:2:6.02:0,6,82	./.	0/0:23,0:23:37.64:0,38,408	0/1:12,1:10:35.43:144,0,35	0/1:6,0:6:28.39:81,0,28	0/0:3,0:3:0:0,0,0	1/1:4,1:3:2.21:9,2,0	0/0:2,0:2:0:0,0,0	1/1:1,0:1:2.99:23,3,0	1/1:4,0:3:0.12:1,0,0	1/1:6,0:5:5.20:77,5,0	1/1:3,2:5:5.80:86,6,0	1/1:8,0:8:4.77:88,5,0	0/1:12,0:10:19.14:19,0,37
chr10	26395530	.	A	ACTT	26754.96	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-5.210;DP=538;FS=2.322;HRun=0;HaplotypeScore=76.6488;InbreedingCoeff=0.9871;MQ=81.33;MQ0=0;MQRankSum=-7.960;QD=55.16;ReadPosRankSum=2.990;VQSLOD=6.6195;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,13:15:33.07:668,33,0	1/1:0,5:5:12.04:272,12,0	0/0:13,0:13:36.12:0,36,574	0/0:20,0:20:46.68:0,47,640	1/1:4,19:21:48.16:1044,48,0	1/1:1,20:22:54.19:1210,54,0	1/1:1,16:16:45.15:1012,45,0	1/1:4,23:28:78.25:1686,78,0	1/1:0,23:23:57.20:1291,57,0	1/1:1,19:21:60.21:1342,60,0	1/1:0,24:24:69.19:1514,69,0	1/1:2,15:17:48.16:1030,48,0	1/1:2,12:14:36.12:789,36,0	1/1:2,22:25:66.23:1450,66,0	0/0:20,0:20:54.18:0,54,900	1/1:3,16:19:42.14:951,42,0	1/1:0,18:19:39.13:856,39,0	1/1:1,15:17:39.13:884,39,0	1/1:1,12:15:42.11:861,42,0	1/1:2,38:38:99:2338,108,0	1/1:1,16:18:48.16:1052,48,0	1/1:3,9:12:30.06:617,30,0	1/1:1,19:21:57.20:1276,57,0	1/1:5,12:17:30.43:664,30,0	1/1:1,19:22:42.10:890,42,0	1/1:3,23:27:75.22:1565,75,0	1/1:0,16:16:45.15:1019,45,0	1/1:1,7:8:21.07:476,21,0
chr10	26398747	.	A	AC	798.85	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-6.134;DP=538;FS=0.000;HRun=1;HaplotypeScore=167.9216;InbreedingCoeff=0.9718;MQ=82.75;MQ0=0;MQRankSum=-4.562;QD=24.96;ReadPosRankSum=-1.741;VQSLOD=2.9366;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:74.88:0,75,454	0/0:4,0:4:11.73:0,12,70	0/0:16,0:15:33.08:0,33,503	0/0:21,0:21:35.59:0,36,612	0/0:17,0:17:50.05:0,50,309	0/0:9,0:9:23.95:0,24,141	0/0:11,0:11:23.29:0,23,134	1/1:6,19:25:57.21:707,57,0	0/0:20,0:20:53.72:0,54,317	0/0:26,0:26:65.90:0,66,352	0/0:32,0:32:92.38:0,92,570	0/0:16,0:16:35.01:0,35,202	0/0:26,0:25:65.97:0,66,392	0/0:13,0:13:38.11:0,38,225	0/0:32,0:32:85.64:0,86,512	0/0:19,0:19:50.57:0,51,293	1/1:1,6:7:16.93:211,17,0	0/0:10,0:10:29.58:0,30,197	0/0:20,0:20:55.68:0,56,328	0/0:21,0:21:59.73:0,60,375	0/0:18,0:18:49.71:0,50,288	0/0:18,0:18:51.12:0,51,304	0/0:21,0:21:59.51:0,60,348	0/0:24,0:24:62.99:0,63,372	0/0:20,0:20:58.59:0,59,347	0/0:18,0:18:44.22:0,44,252	0/0:34,0:34:86.41:0,86,539	0/0:8,0:8:18.97:0,19,116
chr10	26398766	.	C	CA	17980.05	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=2.097;DP=555;FS=18.065;HRun=5;HaplotypeScore=99.7036;InbreedingCoeff=0.9358;MQ=71.57;MQ0=0;MQRankSum=-7.178;QD=33.86;ReadPosRankSum=3.345;VQSLOD=3.1187;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,25:30:66.21:868,66,0	1/1:1,2:3:6.02:79,6,0	0/0:10,0:10:13.68:0,14,175	0/0:14,0:13:36.09:0,36,387	1/1:2,18:20:57.18:746,57,0	1/1:1,10:11:30.10:395,30,0	1/1:2,12:14:33.11:434,33,0	1/1:6,25:30:81.16:998,81,0	1/1:2,15:17:42.14:552,42,0	1/1:5,23:28:75.23:963,75,0	1/1:3,33:36:87.28:1145,87,0	1/1:1,16:17:45.15:592,45,0	1/1:3,22:24:60.20:789,60,0	1/1:0,12:12:36.12:474,36,0	1/1:2,26:28:72.23:946,72,0	1/1:0,16:16:47.94:605,48,0	1/1:1,9:10:27.05:335,27,0	1/1:1,11:12:33.11:434,33,0	1/1:3,22:25:66.18:821,66,0	1/1:2,23:25:66.21:865,66,0	1/1:1,18:19:48.16:632,48,0	1/1:1,17:18:48.16:632,48,0	1/1:2,19:21:57.19:750,57,0	1/1:2,23:25:60.20:788,60,0	1/1:1,21:22:60.20:789,60,0	1/1:1,23:24:69.22:906,69,0	1/1:2,30:32:84.25:1087,84,0	1/1:0,10:10:27.09:355,27,0
chr10	26402289	.	T	TA	2113.24	PASS	AB=1.000;AC=54;AF=0.964;AN=56;BaseQRankSum=-2.039;DP=281;FS=33.706;HRun=13;HaplotypeScore=56.1773;InbreedingCoeff=0.2411;MQ=55.58;MQ0=4;MQRankSum=-0.555;QD=7.52;ReadPosRankSum=2.523;VQSLOD=0.1551;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:17,1:17:18.39:90,18,0	1/1:3,0:3:5.72:29,6,0	0/1:5,0:4:1.10:1,0,17	0/1:10,0:8:2.89:3,0,54	1/1:14,0:14:5.46:104,5,0	1/1:6,0:5:5.75:29,6,0	1/1:7,0:6:8.59:44,9,0	1/1:12,8:19:29.25:257,29,0	1/1:5,0:6:5.80:33,6,0	1/1:6,0:6:14.13:69,14,0	1/1:10,3:12:16.95:94,17,0	1/1:11,0:11:11.43:58,11,0	1/1:5,1:6:3.63:25,4,0	1/1:9,3:12:20.58:107,21,0	1/1:1,1:6:8.68:57,9,0	1/1:6,0:6:11.36:60,11,0	1/1:2,10:12:21.02:195,21,0	1/1:8,1:7:11.90:69,12,0	1/1:12,0:12:28.73:150,29,0	1/1:17,3:20:28.65:146,29,0	1/1:3,0:2:2.88:15,3,0	1/1:6,0:5:11.43:58,11,0	1/1:7,0:7:11.43:58,11,0	1/1:10,1:11:19.77:101,20,0	1/1:20,0:20:23.30:117,23,0	1/1:14,0:13:20.83:124,21,0	1/1:11,1:11:14.76:78,15,0	1/1:4,0:5:8.56:43,9,0
chr10	26402300	.	A	AAAAG	8271.21	PASS	AB=1.000;AC=48;AF=0.857;AN=56;BaseQRankSum=-5.487;DP=319;FS=43.050;HRun=0;HaplotypeScore=61.1977;InbreedingCoeff=0.5176;MQ=57.74;MQ0=3;MQRankSum=-1.750;QD=28.62;ReadPosRankSum=1.778;VQSLOD=2.5650;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,9:19:26.97:480,27,0	1/1:2,2:4:6.01:145,6,0	0/0:7,0:4:6.41:0,6,75	0/1:10,0:8:3.58:4,0,121	1/1:2,10:17:14.78:569,15,0	1/1:0,4:3:6.02:146,6,0	1/1:1,5:6:9.03:217,9,0	0/1:24,0:23:49.46:49,0,159	1/1:2,4:8:8.98:149,9,0	1/1:5,4:9:24.06:408,24,0	1/1:11,3:16:33.04:456,33,0	1/1:1,6:10:15.04:315,15,0	1/1:2,3:7:9.02:169,9,0	1/1:5,8:13:24.08:526,24,0	0/0:8,0:7:2.94:0,3,30	1/1:2,1:5:12:190,12,0	0/0:15,0:15:23.36:0,23,167	1/1:4,4:8:12.03:212,12,0	1/1:4,13:18:45.07:786,45,0	1/1:6,12:22:44.96:838,45,0	1/1:0,2:3:3.01:73,3,0	1/1:0,5:5:12.04:290,12,0	1/1:0,8:9:12.04:290,12,0	1/1:1,11:15:21.01:432,21,0	1/1:3,16:21:24.55:578,25,0	1/1:3,7:11:24.01:446,24,0	1/1:5,4:12:18.47:296,18,0	1/1:1,3:7:9.03:208,9,0
chr10	26402303	.	G	GAAA	2802.42	PASS	AB=0.975;AC=37;AF=0.661;AN=56;BaseQRankSum=1.767;DP=283;FS=32.825;HRun=13;HaplotypeScore=67.8395;InbreedingCoeff=0.2777;MQ=60.72;MQ0=2;MQRankSum=-3.042;QD=12.57;ReadPosRankSum=6.809;VQSLOD=-0.2963;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:15,0:15:2.99:138,0,3	0/1:3,0:3:15.99:37,0,16	0/0:7,0:4:8.99:0,9,111	0/0:10,0:8:16.58:0,17,227	0/1:16,0:16:5.24:187,0,5	1/1:4,0:3:5.96:44,6,0	1/1:4,0:4:9.01:94,9,0	0/0:21,0:20:44.37:0,44,472	1/1:5,0:5:6.01:61,6,0	0/1:10,0:10:34.34:126,0,34	0/1:16,0:15:4.70:164,0,5	1/1:7,0:7:12:117,12,0	0/1:5,1:6:12.92:98,0,13	1/1:11,1:12:23.97:235,24,0	0/0:8,0:7:11.88:0,12,106	1/1:4,0:4:9:100,9,0	0/0:14,0:14:27.60:0,28,357	0/1:9,0:8:4.82:85,0,5	1/1:16,0:16:28.36:223,28,0	0/1:20,0:20:30.15:257,0,30	1/1:3,0:3:3:26,3,0	1/1:5,0:5:11.97:101,12,0	1/1:9,0:9:12.01:109,12,0	1/1:15,1:16:20.89:210,21,0	1/1:18,0:18:23.75:192,24,0	0/1:10,1:10:0.03:186,0,0	1/1:8,0:7:7.81:126,8,0	1/1:6,0:6:8.93:64,9,0
chr10	26402459	.	G	GTT	11745.91	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-2.942;DP=362;FS=3.899;HRun=8;HaplotypeScore=84.7517;InbreedingCoeff=0.7730;MQ=75.44;MQ0=3;MQRankSum=-5.522;QD=35.06;ReadPosRankSum=3.257;VQSLOD=4.9694;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,12:14:27.09:427,27,0	1/1:1,4:5:12.04:191,12,0	0/0:13,0:9:17.80:0,18,168	0/0:13,0:13:10.36:0,10,113	1/1:0,3:3:9.03:143,9,0	1/1:3,23:27:65.71:1008,66,0	1/1:2,9:11:24.08:381,24,0	1/1:6,1:29:69.92:746,70,0	1/1:1,11:12:36.09:545,36,0	1/1:2,11:14:39.09:568,39,0	1/1:1,12:13:36.08:544,36,0	1/1:0,12:13:33.11:524,33,0	1/1:0,10:11:27.09:420,27,0	1/1:0,15:16:42.14:666,42,0	1/1:0,0:10:19.96:69,20,0	1/1:1,13:15:36.12:571,36,0	1/1:1,0:23:60.07:582,60,0	1/1:3,6:9:18.06:286,18,0	1/1:5,17:22:51.17:800,51,0	1/1:1,7:8:21.07:333,21,0	1/1:2,6:8:18.06:286,18,0	1/1:0,2:2:6.02:87,6,0	1/1:1,2:3:6.02:95,6,0	1/1:0,7:7:12.04:190,12,0	1/1:0,8:8:21.07:333,21,0	1/1:2,19:21:60.20:921,60,0	1/1:3,26:29:60.20:936,60,0	1/1:0,2:2:6.02:95,6,0
chr10	26402919	.	TA	T	397.04	PASS	AB=0.892;AC=8;AF=0.143;AN=56;BaseQRankSum=0.274;DP=550;FS=4.079;HRun=11;HaplotypeScore=120.0310;InbreedingCoeff=0.5372;MQ=82.31;MQ0=0;MQRankSum=-2.076;QD=4.01;ReadPosRankSum=-2.238;VQSLOD=1.1385;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:42.54:0,43,436	0/1:7,1:8:0.58:1,0,200	0/1:24,2:26:1.04:1,0,328	0/0:19,1:18:23.93:0,24,252	0/0:31,1:32:56.56:0,57,805	0/0:29,0:29:72.18:0,72,768	0/0:14,0:14:33.08:0,33,352	1/1:3,16:19:47.91:388,48,0	0/0:15,0:15:42.11:0,42,446	0/0:31,0:31:78.20:0,78,832	0/0:15,1:17:20.30:0,20,405	0/0:25,0:25:69.15:0,69,721	0/0:17,1:18:17.47:0,17,391	0/1:9,2:11:3.59:4,0,171	0/0:25,0:25:57.14:0,57,608	0/0:13,0:13:30.08:0,30,320	1/1:1,6:7:14.98:123,15,0	0/0:9,0:9:21.05:0,21,223	0/0:22,0:22:57.14:0,57,602	0/1:25,3:28:4.63:5,0,558	0/0:18,1:19:26.46:0,26,478	0/0:12,1:13:11.44:0,11,321	0/0:21,1:23:26.32:0,26,469	0/0:14,1:15:14.44:0,14,347	0/0:20,0:20:45.11:0,45,475	0/0:32,0:32:78.18:0,78,819	0/0:30,0:30:84.15:0,84,861	0/0:10,0:10:27.07:0,27,288
chr10	26403537	.	TTCA	T	2437.42	PASS	AB=1.000;AC=46;AF=0.821;AN=56;BaseQRankSum=-3.104;DP=490;FS=18.542;HRun=0;HaplotypeScore=99.4444;InbreedingCoeff=0.0451;MQ=39.29;MQ0=57;MQRankSum=2.768;QD=5.42;ReadPosRankSum=-3.545;VQSLOD=-0.4396;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:40,0:32:15.72:165,0,16	1/1:9,0:9:9.42:63,9,0	0/0:40,0:9:6.95:0,7,229	0/1:37,0:11:0.96:1,0,230	1/1:5,0:5:7.93:63,8,0	1/1:18,1:16:11.18:129,11,0	1/1:18,0:12:14.39:96,14,0	1/1:6,1:5:15.02:149,15,0	0/1:18,0:14:16.79:61,0,17	1/1:16,0:12:7.53:170,8,0	1/1:13,0:11:9.76:86,10,0	1/1:14,0:12:5.17:38,5,0	1/1:12,0:9:16.49:131,16,0	0/1:15,0:9:20.31:20,0,30	1/1:9,4:11:17.85:175,18,0	1/1:15,0:12:5.46:119,5,0	1/1:17,4:17:23.14:206,23,0	0/1:21,0:17:47.05:85,0,47	1/1:13,0:12:7.48:66,7,0	1/1:5,0:5:5.35:29,5,0	0/1:31,0:23:14.46:32,0,14	1/1:15,0:12:10.34:93,10,0	0/1:19,0:14:1.22:50,0,1	1/1:26,0:19:14.93:110,15,0	1/1:11,0:10:24.68:175,25,0	1/1:22,0:15:22.12:167,22,0	0/1:8,0:5:4.95:11,0,5	1/1:5,0:4:11.93:89,12,0
chr10	26403546	.	CTCT	C	1400.23	PASS	AB=0.990;AC=37;AF=0.661;AN=56;BaseQRankSum=-1.917;DP=553;FS=39.071;HRun=0;HaplotypeScore=97.6111;InbreedingCoeff=-0.1659;MQ=29.93;MQ0=106;MQRankSum=2.689;QD=2.99;ReadPosRankSum=-2.340;VQSLOD=-0.0177;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:44,0:33:1.16:169,1,0	1/1:7,0:7:5.95:42,6,0	0/0:31,0:1:3.01:0,3,58	0/0:35,0:7:13.65:0,14,154	1/1:4,0:3:1.96:18,2,0	0/1:22,0:19:9.83:73,0,10	1/1:19,0:8:7.99:55,8,0	1/1:20,0:6:4.32:30,4,0	0/1:23,0:15:12.57:39,0,13	0/1:18,0:10:52.82:65,0,53	1/1:12,0:7:2.61:43,3,0	0/1:18,0:12:4.42:16,0,4	0/1:15,0:9:33.52:83,0,34	0/0:18,0:9:1.67:0,2,34	1/1:10,4:10:17.97:181,18,0	0/1:15,0:11:24.03:70,0,24	1/1:21,0:14:8.51:159,9,0	0/1:25,0:18:22.11:22,0,69	0/1:18,0:15:66.50:69,0,66	1/1:4,0:3:2.51:20,3,0	0/1:47,0:25:6.26:6,0,125	1/1:12,0:7:6.62:56,7,0	0/1:17,0:12:7.52:12,0,8	0/1:37,0:22:0.09:61,0,0	1/1:10,0:9:18.02:121,18,0	0/1:28,1:16:85.59:86,0,92	0/1:8,0:5:12.01:12,0,15	1/1:3,0:2:5.96:43,6,0
chr10	26403562	.	TC	T	3103.21	PASS	AB=0.875;AC=29;AF=0.518;AN=56;BaseQRankSum=4.630;DP=735;FS=180.682;HRun=2;HaplotypeScore=103.7513;InbreedingCoeff=-0.4509;MQ=22.75;MQ0=186;MQRankSum=-0.938;QD=4.64;ReadPosRankSum=3.410;VQSLOD=-0.1124;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:48,10:36:99:342,0,189	1/1:3,3:5:9.03:126,9,0	0/0:23,0:1:3.01:0,3,44	0/0:24,0:3:5.59:0,6,35	1/1:10,2:7:5.97:61,6,0	0/1:16,8:16:95.04:319,0,95	0/1:25,2:5:38.60:75,0,39	0/1:32,3:8:37:97,0,37	0/1:27,3:16:99:101,0,192	0/1:27,3:15:99:117,0,377	1/1:7,6:8:17.97:207,18,0	0/1:20,7:13:65.31:266,0,65	0/1:15,1:7:2.65:3,0,185	0/1:28,5:13:99:146,0,119	0/1:15,4:10:29.56:109,0,30	0/1:18,2:15:65.66:66,0,170	1/1:23,7:20:21.02:227,21,0	0/1:27,2:20:16.10:16,0,314	0/1:17,5:16:99:179,0,127	1/1:2,2:2:3.01:42,3,0	0/1:71,2:41:18.29:18,0,259	0/1:25,4:16:99:112,0,214	0/1:19,6:14:96.31:184,0,96	0/1:46,3:27:18.68:19,0,221	0/1:14,3:8:61.07:100,0,61	0/1:31,9:17:99:331,0,230	0/0:11,0:6:4.26:0,4,48	0/0:8,0:3:5.96:0,6,44
chr10	26404097	.	CA	C	810.01	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.916;DP=335;FS=1.721;HRun=2;HaplotypeScore=45.7384;InbreedingCoeff=0.9383;MQ=71.78;MQ0=1;MQRankSum=-0.998;QD=31.15;ReadPosRankSum=-0.484;VQSLOD=2.9453;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:42.14:0,42,626	0/0:5,0:5:15.02:0,15,201	0/0:21,0:20:59.60:0,60,751	0/0:14,0:13:38.80:0,39,475	0/0:15,0:14:42.14:0,42,628	0/0:13,0:13:39.12:0,39,564	0/0:8,0:8:24.08:0,24,359	1/1:0,10:9:27.09:348,27,0	0/0:10,0:10:30.10:0,30,445	0/0:13,0:13:36.12:0,36,539	0/0:15,0:15:45.11:0,45,646	0/0:9,0:9:27.09:0,27,401	0/0:13,0:13:37.36:0,37,515	0/0:5,0:5:15.05:0,15,224	0/0:9,0:9:24.08:0,24,359	0/0:8,0:8:24.08:0,24,344	1/1:1,15:16:45.15:584,45,0	0/0:13,0:13:39.13:0,39,581	0/0:16,0:16:45.15:0,45,656	0/0:21,0:21:63.21:0,63,938	0/0:12,0:12:36.12:0,36,539	0/0:12,0:12:36.09:0,36,507	0/0:17,0:17:51.14:0,51,739	0/0:5,0:5:9.46:0,9,110	0/0:12,0:12:36.12:0,36,538	0/0:16,0:16:42.14:0,42,629	0/0:5,0:5:15.05:0,15,223	0/0:6,0:6:15.03:0,15,200
chr10	26404215	.	A	AT	14420.65	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-5.655;DP=456;FS=4.835;HRun=5;HaplotypeScore=47.8652;InbreedingCoeff=0.9780;MQ=74.82;MQ0=0;MQRankSum=-7.167;QD=33.15;ReadPosRankSum=4.789;VQSLOD=5.0002;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,21:23:57.18:744,57,0	1/1:1,13:14:36.12:470,36,0	0/0:12,0:12:29.85:0,30,277	0/0:9,0:9:22.39:0,22,193	1/1:3,17:20:48.16:631,48,0	1/1:1,19:20:48.16:632,48,0	1/1:0,10:10:27.09:355,27,0	1/1:3,21:23:63.17:808,63,0	1/1:1,13:14:39.13:508,39,0	1/1:0,19:19:57.17:735,57,0	1/1:4,17:21:48.15:626,48,0	1/1:1,16:16:36.12:474,36,0	1/1:2,11:13:30.10:391,30,0	1/1:1,7:8:21.07:276,21,0	1/1:0,13:13:39.08:494,39,0	1/1:1,9:10:24.08:312,24,0	1/1:5,22:27:63.20:829,63,0	1/1:0,17:17:39.13:513,39,0	1/1:3,13:16:39.13:513,39,0	1/1:3,26:29:72.23:947,72,0	1/1:0,11:11:33.11:434,33,0	1/1:3,17:20:48.16:631,48,0	1/1:2,21:23:63.13:783,63,0	1/1:1,10:11:30.10:395,30,0	1/1:0,14:14:39.13:513,39,0	1/1:0,17:16:48.14:616,48,0	1/1:2,17:19:48.16:632,48,0	1/1:0,4:4:12.04:158,12,0
chr10	26404756	.	GAATAATTAT	G	40925.46	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=7.095;DP=553;FS=4.540;HRun=0;HaplotypeScore=215.9067;InbreedingCoeff=0.9112;MQ=60.15;MQ0=0;MQRankSum=-8.948;QD=78.25;ReadPosRankSum=6.221;VQSLOD=4.5040;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,14:16:38.46:1116,38,0	1/1:2,10:12:33.11:999,33,0	0/0:17,0:17:51.17:0,51,2191	0/0:13,0:13:39.13:0,39,1774	1/1:2,24:26:66.20:2081,66,0	1/1:2,19:21:60.21:1851,60,0	1/1:2,11:13:24.08:758,24,0	1/1:4,23:27:69.21:2046,69,0	1/1:3,22:25:69.24:2179,69,0	1/1:3,27:28:81.28:2519,81,0	1/1:1,32:33:78.27:2405,78,0	1/1:0,21:21:57.20:1801,57,0	1/1:0,23:23:60.21:1896,60,0	1/1:1,21:22:60.21:1837,60,0	1/1:2,17:19:48.16:1516,48,0	1/1:0,15:15:45.15:1422,45,0	1/1:2,11:13:30.10:831,30,0	1/1:4,3:7:9.03:284,9,0	1/1:0,16:16:48.16:1517,48,0	1/1:1,28:29:78.27:2372,78,0	1/1:1,5:6:6.02:190,6,0	1/1:0,26:26:66.23:2085,66,0	1/1:1,26:27:78.26:2284,78,0	1/1:3,8:11:15.05:473,15,0	1/1:1,8:9:21.07:664,21,0	1/1:3,24:26:69.24:2125,69,0	1/1:3,37:40:93.32:2822,93,0	1/1:0,9:9:27.09:853,27,0
chr10	26404856	.	GA	G	13216.29	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=3.419;DP=630;FS=3.536;HRun=8;HaplotypeScore=70.2106;InbreedingCoeff=0.9836;MQ=79.36;MQ0=0;MQRankSum=-0.421;QD=24.29;ReadPosRankSum=3.664;VQSLOD=5.7481;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,26:28:66.10:637,66,0	1/1:1,13:14:36.06:348,36,0	0/0:17,0:17:27.03:0,27,287	0/0:15,0:15:27.08:0,27,319	1/1:3,35:38:99:985,102,0	1/1:4,23:27:51.08:492,51,0	1/1:0,19:19:57.09:550,57,0	0/0:24,0:24:69.16:0,69,806	1/1:2,29:31:87.14:840,87,0	1/1:2,31:33:90.13:864,90,0	1/1:6,18:24:57.09:550,57,0	1/1:2,13:15:39.06:376,39,0	1/1:9,15:24:51.07:492,51,0	1/1:2,17:19:51.08:492,51,0	0/0:22,0:22:66.20:0,66,797	1/1:3,22:25:60.09:579,60,0	0/0:8,0:8:21.06:0,21,254	1/1:0,12:12:33.05:319,33,0	1/1:2,18:20:51.08:492,51,0	1/1:7,21:28:72.11:691,72,0	1/1:1,32:33:93.15:898,93,0	1/1:1,10:11:30.05:290,30,0	1/1:2,32:34:87.11:840,87,0	1/1:1,23:24:8.87:369,9,0	1/1:0,18:18:51.08:493,51,0	1/1:4,25:29:72.11:695,72,0	1/1:7,23:30:75.10:719,75,0	1/1:1,7:8:21.03:203,21,0
chr10	26405399	.	A	AT	11803.67	PASS	AB=1.000;AC=53;AF=0.946;AN=56;BaseQRankSum=-3.903;DP=438;FS=1.332;HRun=8;HaplotypeScore=42.1756;InbreedingCoeff=0.4205;MQ=70.43;MQ0=0;MQRankSum=-4.020;QD=27.26;ReadPosRankSum=2.140;VQSLOD=5.2618;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,17:18:30.09:346,30,0	1/1:1,3:4:6.02:69,6,0	0/1:6,0:6:13.55:14,0,92	0/0:5,0:5:4.15:0,4,52	1/1:3,24:27:47.71:788,48,0	1/1:2,22:24:63.19:727,63,0	1/1:2,5:7:15.04:173,15,0	1/1:5,22:27:69.19:783,69,0	1/1:2,14:16:39.12:450,39,0	1/1:3,15:18:45.13:519,45,0	1/1:1,21:22:57.17:658,57,0	1/1:2,8:10:24.07:277,24,0	1/1:4,12:16:36.11:416,36,0	1/1:0,12:12:33.10:381,33,0	1/1:1,0:8:19.89:101,20,0	1/1:1,14:15:36.11:415,36,0	1/1:2,18:20:54.16:617,54,0	1/1:2,10:12:24.07:277,24,0	1/1:1,11:13:35.97:396,36,0	1/1:3,23:26:66.20:762,66,0	1/1:5,10:15:27.08:312,27,0	1/1:0,1:1:3.01:35,3,0	1/1:4,13:17:39.12:451,39,0	1/1:1,7:8:21.06:242,21,0	1/1:1,15:16:45.13:519,45,0	1/1:3,22:25:60.18:692,60,0	1/1:4,32:36:92.99:1038,93,0	1/1:0,14:14:30.09:346,30,0
chr10	26405871	.	CGTGTGTGTGTGTGTGTGT	C	14609.05	PASS	AB=0.721;AC=48;AF=0.857;AN=56;BaseQRankSum=1.705;DP=620;FS=8.624;HRun=0;HaplotypeScore=275.1990;InbreedingCoeff=0.4718;MQ=50.50;MQ0=6;MQRankSum=-0.399;QD=25.95;ReadPosRankSum=4.519;VQSLOD=2.1056;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:23,3:26:11.34:412,11,0	1/1:2,6:8:11.84:535,12,0	0/0:26,0:18:9.50:0,10,247	0/0:27,0:15:9.03:0,9,275	1/1:15,5:20:2.94:147,3,0	1/1:6,16:23:33.11:1414,33,0	1/1:26,10:34:9.03:292,9,0	0/1:16,0:22:36.63:37,0,49	1/1:9,14:23:21.07:889,21,0	1/1:12,16:28:36.85:571,37,0	1/1:16,10:27:18.05:532,18,0	1/1:8,12:20:24.55:1033,25,0	1/1:9,13:23:8.72:367,9,0	1/1:12,11:23:24.08:1128,24,0	1/1:11,0:30:24.08:838,24,0	1/1:11,9:20:9.03:346,9,0	1/1:8,0:22:11.52:377,12,0	1/1:12,0:14:9.03:279,9,0	1/1:10,5:14:5.84:228,6,0	1/1:8,17:25:33.11:1427,33,0	1/1:28,0:27:9:174,9,0	1/1:10,9:19:15.02:410,15,0	1/1:11,12:22:11.55:495,12,0	0/1:15,13:28:1.28:169,0,1	1/1:9,10:19:24.08:1076,24,0	1/1:11,11:22:31.73:806,32,0	1/1:10,5:17:15.04:629,15,0	0/0:4,0:4:0.47:0,0,1
chr10	26406149	.	TA	T	18246.56	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-3.877;DP=488;FS=0.000;HRun=1;HaplotypeScore=53.5153;InbreedingCoeff=0.9965;MQ=78.13;MQ0=0;MQRankSum=-8.414;QD=39.41;ReadPosRankSum=4.518;VQSLOD=5.0982;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,18:18:54.18:755,54,0	1/1:0,9:9:24.08:335,24,0	0/0:13,0:13:39.03:0,39,592	0/0:12,0:12:33.58:0,34,496	1/1:0,25:25:63.21:880,63,0	1/1:0,17:17:48.16:671,48,0	1/1:0,17:17:45.15:629,45,0	1/1:0,25:25:75.21:997,75,0	1/1:0,13:13:39.13:545,39,0	1/1:0,24:24:72.24:1003,72,0	1/1:0,16:16:48.16:669,48,0	1/1:0,13:13:39.13:545,39,0	1/1:0,12:12:36.12:503,36,0	1/1:0,14:14:39.13:545,39,0	1/1:0,15:15:45.15:629,45,0	1/1:0,14:14:42.14:587,42,0	1/1:0,22:22:57.19:797,57,0	1/1:0,20:20:54.18:755,54,0	1/1:0,27:27:81.26:1116,81,0	1/1:0,28:28:81.27:1132,81,0	1/1:0,16:16:42.14:587,42,0	1/1:0,17:17:48.16:667,48,0	1/1:0,28:28:75.25:1047,75,0	1/1:0,8:8:24.08:336,24,0	1/1:0,20:20:54.18:755,54,0	1/1:0,21:21:60.20:838,60,0	1/1:0,15:15:42.14:587,42,0	1/1:0,9:9:24.08:335,24,0
chr10	26406608	.	G	GT	11963.60	PASS	AB=0.563;AC=51;AF=0.911;AN=56;BaseQRankSum=-6.949;DP=466;FS=11.884;HRun=9;HaplotypeScore=44.6100;InbreedingCoeff=0.7782;MQ=79.71;MQ0=0;MQRankSum=-6.386;QD=27.13;ReadPosRankSum=3.219;VQSLOD=4.2827;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,12:16:16.36:387,16,0	1/1:0,6:6:18.05:199,18,0	0/0:16,0:16:32.98:0,33,286	0/0:9,0:9:21:0,21,182	1/1:1,32:33:90.24:995,90,0	1/1:1,14:15:39.11:431,39,0	1/1:2,11:13:27.07:299,27,0	1/1:3,23:26:69.17:753,69,0	1/1:3,17:20:48.13:531,48,0	1/1:4,17:21:48.13:531,48,0	1/1:2,11:13:7.03:306,7,0	1/1:2,12:14:36.10:396,36,0	1/1:3,15:19:18.88:417,19,0	0/1:2,7:9:5:178,0,5	1/1:2,0:13:28.53:148,29,0	1/1:0,15:15:42.11:465,42,0	1/1:0,9:9:21.06:232,21,0	1/1:0,8:8:24.06:265,24,0	1/1:7,18:25:54.12:581,54,0	1/1:2,19:21:34.10:597,34,0	1/1:2,11:13:33.09:364,33,0	1/1:1,16:17:45.12:498,45,0	1/1:0,17:17:42.11:465,42,0	1/1:1,8:9:21.06:232,21,0	1/1:1,15:16:45.12:498,45,0	1/1:1,25:27:78.03:835,78,0	1/1:3,20:23:54.15:597,54,0	1/1:0,23:23:69.19:763,69,0
chr10	26407113	.	A	AT	16426.94	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-6.343;DP=542;FS=9.101;HRun=6;HaplotypeScore=54.2827;InbreedingCoeff=0.9574;MQ=83.72;MQ0=0;MQRankSum=-6.355;QD=33.32;ReadPosRankSum=3.058;VQSLOD=4.5690;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,19:22:57.16:701,57,0	1/1:2,13:15:39.12:491,39,0	0/0:18,0:18:41.81:0,42,410	0/0:14,0:15:25.60:0,26,245	1/1:2,27:29:75.04:864,75,0	1/1:0,17:17:51.16:642,51,0	1/1:1,14:15:42.13:528,42,0	1/1:2,16:18:48.15:602,48,0	1/1:1,18:19:45.14:561,45,0	1/1:3,24:27:72.21:881,72,0	1/1:3,21:24:63.20:793,63,0	1/1:1,7:8:18.06:226,18,0	1/1:0,17:17:48.15:604,48,0	1/1:1,14:15:42.13:528,42,0	0/0:15,1:15:10.37:0,10,421	1/1:1,15:16:45.14:566,45,0	1/1:1,22:23:57.18:717,57,0	1/1:2,8:10:18.06:226,18,0	1/1:3,24:27:72.23:903,72,0	1/1:0,26:26:78.22:964,78,0	1/1:0,11:11:30.10:377,30,0	1/1:0,23:23:60.19:755,60,0	1/1:0,27:27:75.24:944,75,0	1/1:0,3:3:9.03:113,9,0	1/1:0,26:26:72.23:906,72,0	1/1:5,27:32:93.06:1120,93,0	1/1:4,23:26:66.14:810,66,0	1/1:0,16:16:48.15:604,48,0
chr10	26408167	.	CCA	C	13523.71	PASS	AC=52;AF=1.000;AN=52;DP=434;FS=0.000;HRun=0;HaplotypeScore=127.1138;InbreedingCoeff=-0.0094;MQ=39.75;MQ0=33;QD=33.15;VQSLOD=6.9656;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,24:24:39.13:618,39,0	1/1:0,9:9:24.08:390,24,0	./.	./.	1/1:0,22:22:54.18:877,54,0	1/1:0,22:22:45.15:731,45,0	1/1:0,9:9:15.05:244,15,0	1/1:0,20:19:54.13:814,54,0	1/1:0,13:13:30.10:487,30,0	1/1:0,20:20:51.17:820,51,0	1/1:1,24:25:42.14:676,42,0	1/1:0,6:6:8.58:137,9,0	1/1:0,17:17:33.11:536,33,0	1/1:0,14:14:27.09:427,27,0	1/1:0,19:19:30.10:475,30,0	1/1:0,9:9:24.08:390,24,0	1/1:0,16:15:24.08:390,24,0	1/1:0,8:8:12.04:195,12,0	1/1:0,14:14:30.07:422,30,0	1/1:0,25:23:57.15:881,57,0	1/1:0,8:6:18.06:280,18,0	1/1:0,10:10:21.05:287,21,0	1/1:0,24:23:45.15:731,45,0	1/1:0,10:9:15.05:244,15,0	1/1:0,15:14:27.09:439,27,0	1/1:0,20:20:60.19:935,60,0	1/1:0,26:26:63.21:1002,63,0	1/1:0,3:3:6.02:98,6,0
chr10	26408584	.	TA	T	3514.21	PASS	AC=50;AF=0.926;AN=54;BaseQRankSum=7.112;DP=262;FS=53.571;HRun=1;HaplotypeScore=144.4024;InbreedingCoeff=0.8687;MQ=52.86;MQ0=0;MQRankSum=-7.149;QD=14.64;ReadPosRankSum=5.479;VQSLOD=0.4918;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,10:11:31.81:179,32,0	1/1:1,3:4:11.48:62,11,0	0/0:11,0:11:27.65:0,28,384	0/0:11,0:11:21.98:0,22,402	1/1:0,13:13:33.92:163,34,0	1/1:1,9:10:25.86:137,26,0	1/1:0,4:4:11.50:59,12,0	1/1:4,10:13:28.73:171,29,0	1/1:0,16:16:46.07:242,46,0	1/1:0,7:8:22.68:128,23,0	1/1:0,12:12:31.21:154,31,0	1/1:0,11:11:31.72:170,32,0	1/1:2,13:15:40.35:220,40,0	1/1:0,12:12:34.13:174,34,0	1/1:2,9:11:28.88:158,29,0	1/1:0,14:14:40.41:215,40,0	1/1:0,2:2:5.75:30,6,0	1/1:0,6:6:17.37:96,17,0	1/1:0,5:5:14.68:88,15,0	1/1:0,14:14:40.01:203,40,0	1/1:0,5:5:14.33:78,14,0	1/1:0,7:7:19.88:103,20,0	1/1:0,15:15:42.44:207,42,0	1/1:1,7:7:20.04:107,20,0	1/1:0,4:4:11.60:65,12,0	1/1:0,7:7:20.43:116,20,0	1/1:0,11:12:34.78:188,35,0	./.
chr10	26408586	.	TTAG	T	6033.62	PASS	AB=1.000;AC=51;AF=0.944;AN=54;BaseQRankSum=6.989;DP=252;FS=51.401;HRun=0;HaplotypeScore=142.1189;InbreedingCoeff=0.5822;MQ=51.06;MQ0=0;MQRankSum=-6.996;QD=25.04;ReadPosRankSum=5.724;VQSLOD=2.9330;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,10:10:30.02:276,30,0	1/1:0,3:3:9:77,9,0	0/1:11,0:11:8.40:8,0,531	0/0:11,0:11:24.35:0,24,646	1/1:0,13:13:35.94:296,36,0	1/1:0,9:9:27.01:246,27,0	1/1:0,4:4:12:105,12,0	1/1:2,10:12:26.79:251,27,0	1/1:0,16:16:48.03:434,48,0	1/1:1,7:8:24.04:237,24,0	1/1:0,12:12:32.96:275,33,0	1/1:0,11:11:33.03:304,33,0	1/1:0,13:13:39.01:353,39,0	1/1:0,12:12:35.98:316,36,0	1/1:0,9:9:24:212,24,0	1/1:0,14:14:42.04:386,42,0	1/1:0,2:2:6:54,6,0	1/1:0,6:6:18.02:172,18,0	1/1:0,5:5:15.03:153,15,0	1/1:0,14:14:42:367,42,0	1/1:0,5:5:15.01:143,15,0	1/1:0,7:7:20.98:184,21,0	1/1:0,15:15:44.95:376,45,0	1/1:0,7:6:17.98:148,18,0	1/1:0,4:4:12.01:115,12,0	1/1:0,7:7:21.03:205,21,0	1/1:1,11:12:36.04:340,36,0	./.
chr10	26408591	.	TC	T	5874.04	PASS	AC=50;AF=0.926;AN=54;BaseQRankSum=7.124;DP=258;FS=53.396;HRun=4;HaplotypeScore=133.9053;InbreedingCoeff=0.8663;MQ=50.96;MQ0=0;MQRankSum=-7.179;QD=25.43;ReadPosRankSum=6.538;VQSLOD=0.6856;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,10:10:29.97:260,30,0	1/1:0,3:3:9:77,9,0	0/0:13,0:12:29.98:0,30,351	0/0:14,0:14:36.58:0,37,477	1/1:0,13:13:35.99:308,36,0	1/1:0,9:9:26.96:231,27,0	1/1:0,4:4:12:104,12,0	1/1:0,12:12:30.03:288,30,0	1/1:0,16:16:47.95:416,48,0	1/1:1,7:8:17.20:188,17,0	1/1:0,12:12:32.99:284,33,0	1/1:0,11:11:32.97:286,33,0	1/1:0,13:13:38.98:341,39,0	1/1:0,12:12:35.95:305,36,0	1/1:0,9:9:24.01:215,24,0	1/1:0,14:14:41.98:368,42,0	1/1:0,2:2:6:54,6,0	1/1:0,6:6:18.02:167,18,0	1/1:1,5:6:18.03:177,18,0	1/1:0,14:14:42:367,42,0	1/1:0,5:5:14.63:107,15,0	1/1:0,7:7:20.96:174,21,0	1/1:0,15:15:44.99:387,45,0	1/1:0,7:6:18:153,18,0	1/1:0,4:4:11.96:99,12,0	1/1:0,7:7:21.01:191,21,0	1/1:0,12:12:36.03:329,36,0	./.
chr10	26408663	.	TTTTA	T	5401.02	PASS	AB=0.585;AC=43;AF=0.860;AN=50;BaseQRankSum=2.767;DP=154;FS=39.178;HRun=0;HaplotypeScore=78.3954;InbreedingCoeff=0.2697;MQ=52.23;MQ0=1;MQRankSum=-2.618;QD=36.99;ReadPosRankSum=2.954;VQSLOD=2.8412;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:1,1:2:46.81:47,0,69	1/1:1,1:2:3.01:53,3,0	0/0:6,0:5:15.05:0,15,287	0/0:2,0:2:4.04:0,4,15	0/1:2,9:11:9.58:361,0,10	1/1:0,7:7:18.06:304,18,0	1/1:0,4:4:12.04:211,12,0	0/1:2,12:13:15.53:407,0,16	1/1:1,2:3:9.02:133,9,0	1/1:2,4:5:12.03:186,12,0	1/1:2,11:12:30.10:510,30,0	1/1:1,2:3:9.02:133,9,0	1/1:2,4:6:9.03:158,9,0	1/1:1,4:5:12.04:211,12,0	1/1:2,4:6:12.03:186,12,0	1/1:1,5:6:15.05:264,15,0	1/1:0,2:2:3.01:53,3,0	1/1:0,1:1:3.01:53,3,0	1/1:1,2:3:6.02:106,6,0	1/1:2,7:9:18.05:291,18,0	./.	1/1:2,2:3:9.02:133,9,0	1/1:1,6:7:18.04:265,18,0	./.	1/1:1,7:8:21.06:344,21,0	1/1:4,9:13:32.93:517,33,0	1/1:2,9:11:27.09:476,27,0	./.
chr10	26415102	.	C	CG	292.14	PASS	AC=12;AF=0.750;AN=16;BaseQRankSum=4.308;DP=83;FS=27.831;HRun=2;HaplotypeScore=18.2237;MQ=22.33;MQ0=23;MQRankSum=-2.051;QD=12.70;ReadPosRankSum=0.667;VQSLOD=0.2869;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	1/1:1,2:2:5.75:54,6,0	0/0:16,0:8:24.07:0,24,285	0/0:10,0:5:15.05:0,15,179	1/1:0,4:4:2.60:10,3,0	./.	./.	./.	./.	./.	./.	./.	./.	1/1:0,1:1:3.01:38,3,0	./.	./.	./.	./.	./.	1/1:2,5:4:5.69:53,6,0	./.	./.	1/1:2,0:2:4.90:17,5,0	./.	1/1:0,6:6:15.05:214,15,0	./.	./.	./.
chr10	26415622	.	A	AT	7704.04	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=5.852;DP=278;FS=34.328;HRun=5;HaplotypeScore=76.9902;InbreedingCoeff=0.8316;MQ=70.99;MQ0=0;MQRankSum=-6.462;QD=30.09;ReadPosRankSum=3.711;VQSLOD=2.7153;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,18:18:45.14:584,45,0	1/1:0,6:6:12.04:158,12,0	0/0:9,0:9:24.03:0,24,246	0/0:13,0:11:27.07:0,27,290	1/1:2,9:11:21.07:269,21,0	1/1:2,3:5:9.03:118,9,0	1/1:1,6:7:18.06:237,18,0	1/1:5,15:20:45.12:572,45,0	1/1:0,9:9:18.06:237,18,0	1/1:1,14:15:42.09:531,42,0	1/1:1,8:9:18.06:231,18,0	1/1:1,2:3:6.02:79,6,0	1/1:0,7:7:15.05:192,15,0	1/1:2,5:7:15.05:194,15,0	1/1:1,4:5:15.01:178,15,0	1/1:0,7:7:18.06:237,18,0	1/1:2,21:23:54.18:711,54,0	1/1:0,6:6:18.06:237,18,0	1/1:1,16:17:45.12:574,45,0	1/1:0,7:7:15.05:197,15,0	1/1:0,7:7:21.07:275,21,0	1/1:0,9:9:21.07:276,21,0	1/1:1,11:12:30.10:394,30,0	1/1:1,6:6:15.05:197,15,0	1/1:1,10:11:15.05:197,15,0	1/1:0,11:10:30.10:395,30,0	1/1:0,11:10:21.07:276,21,0	1/1:0,6:6:12.04:158,12,0
chr10	26415754	.	CA	C	71.39	PASS	AC=8;AF=0.571;AN=14;BaseQRankSum=3.476;DP=60;FS=9.363;HRun=1;HaplotypeScore=40.4956;MQ=55.75;MQ0=0;MQRankSum=-2.663;QD=11.90;ReadPosRankSum=-1.590;VQSLOD=0.5038;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:23,0:21:59.69:0,60,919	0/0:20,1:20:45.66:0,46,843	./.	./.	./.	./.	./.	./.	1/1:0,2:2:3.01:40,3,0	1/1:0,2:2:3.01:38,3,0	./.	./.	./.	./.	1/1:0,1:1:3.01:41,3,0	./.	./.	./.	./.	./.	./.	./.	1/1:0,1:1:3.01:39,3,0	./.	0/0:3,1:2:2.99:0,3,23	./.
chr10	26415980	.	C	CT	5610.35	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=4.551;DP=320;FS=11.050;HRun=3;HaplotypeScore=52.9665;InbreedingCoeff=0.6589;MQ=50.47;MQ0=13;MQRankSum=-0.826;QD=22.81;ReadPosRankSum=3.674;VQSLOD=3.2368;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,14:16:24.08:336,24,0	1/1:3,3:6:6.02:84,6,0	0/0:37,0:21:57.15:0,57,655	0/0:37,0:23:60.08:0,60,697	1/1:0,6:4:6.02:84,6,0	1/1:0,4:4:9.03:126,9,0	1/1:0,5:4:12.04:168,12,0	1/1:5,10:9:15.05:210,15,0	1/1:0,13:13:38.96:457,39,0	1/1:2,7:9:24.04:314,24,0	1/1:0,5:5:6.02:84,6,0	1/1:0,10:7:18.06:252,18,0	1/1:0,8:5:12.04:168,12,0	1/1:1,9:10:12.04:168,12,0	1/1:1,6:5:6.02:84,6,0	1/1:1,8:7:12.04:168,12,0	1/1:2,8:9:21.03:272,21,0	1/1:0,9:7:18.06:252,18,0	1/1:1,5:5:9.03:126,9,0	1/1:1,10:8:18.02:230,18,0	1/1:2,17:18:27.05:356,27,0	1/1:2,11:13:27.05:356,27,0	1/1:1,12:11:21.07:294,21,0	1/1:1,6:7:8.99:104,9,0	1/1:2,3:4:6.02:84,6,0	1/1:1,5:6:12.04:168,12,0	1/1:3,14:14:36.08:481,36,0	1/1:0,6:6:15.02:189,15,0
chr10	26416542	.	T	TG	20915.51	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-0.439;DP=693;FS=6.339;HRun=4;HaplotypeScore=86.2090;InbreedingCoeff=0.9975;MQ=48.21;MQ0=16;MQRankSum=2.248;QD=33.63;ReadPosRankSum=4.694;VQSLOD=5.2333;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,27:30:35.24:868,35,0	1/1:1,8:9:27.06:350,27,0	0/0:40,0:12:33.09:0,33,370	0/0:31,0:13:39.09:0,39,425	1/1:2,28:29:75.21:1002,75,0	1/1:0,27:27:63.21:861,63,0	1/1:2,18:19:45.15:615,45,0	1/1:0,19:17:48.16:656,48,0	1/1:2,22:24:23.21:704,23,0	1/1:3,25:28:69.23:943,69,0	1/1:5,16:20:54.17:723,54,0	1/1:1,16:17:45.15:615,45,0	1/1:1,20:21:54.18:738,54,0	1/1:1,20:20:57.19:778,57,0	1/1:2,22:22:54.18:738,54,0	1/1:1,14:15:33.07:430,33,0	1/1:3,42:45:99:1474,108,0	1/1:2,12:13:33.08:431,33,0	1/1:5,14:18:42.14:575,42,0	1/1:1,38:39:99:1476,108,0	1/1:1,26:27:63.21:862,63,0	1/1:1,29:30:75.25:1025,75,0	1/1:0,20:20:54.18:737,54,0	1/1:0,15:15:36.12:492,36,0	1/1:0,21:21:48.16:648,48,0	1/1:4,35:38:99:1456,108,0	1/1:3,29:32:87.29:1187,87,0	1/1:1,13:13:39.13:533,39,0
chr10	26416811	.	TAGCCATTCTGACTGGTGTG	T	22534.97	PASS	AC=46;AF=0.885;AN=52;BaseQRankSum=5.247;DP=390;FS=1.927;HRun=0;HaplotypeScore=210.4831;InbreedingCoeff=0.7741;MQ=47.77;MQ0=55;MQRankSum=-2.462;QD=84.09;ReadPosRankSum=6.021;VQSLOD=4.5477;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,14:21:36.12:1905,36,0	./.	0/0:55,0:12:36.08:0,36,1383	0/0:56,0:12:20.91:0,21,649	1/1:4,12:12:17.98:769,18,0	1/1:7,9:16:15.05:772,15,0	1/1:3,3:5:9.03:489,9,0	1/1:6,4:10:12.02:389,12,0	1/1:3,7:9:21.07:1140,21,0	1/1:2,17:18:45.10:2299,45,0	1/1:3,5:8:12.04:651,12,0	1/1:0,7:7:12.04:652,12,0	1/1:5,7:12:18.06:977,18,0	1/1:4,10:12:21.07:1140,21,0	1/1:6,9:15:21.07:1140,21,0	1/1:5,3:8:9.03:489,9,0	1/1:2,4:4:9.03:485,9,0	0/0:7,0:4:3:0,3,25	1/1:4,5:7:15.05:815,15,0	1/1:4,13:14:29.97:1339,30,0	./.	1/1:4,5:8:6.02:283,6,0	1/1:4,6:10:15.05:772,15,0	1/1:3,4:7:12.04:591,12,0	1/1:0,6:6:15.05:814,15,0	1/1:3,10:12:27.04:1322,27,0	1/1:6,15:21:45.15:2399,45,0	1/1:1,7:7:18.06:903,18,0
chr10	26417117	.	ATTATTATTG	A	17079.25	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=4.168;DP=484;FS=0.000;HRun=0;HaplotypeScore=184.7021;InbreedingCoeff=0.7684;MQ=61.56;MQ0=0;MQRankSum=-6.080;QD=37.29;ReadPosRankSum=3.002;VQSLOD=4.3814;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,17:28:29.76:570,30,0	1/1:0,8:8:17.99:447,18,0	0/0:13,0:13:30.10:0,30,953	0/0:13,0:13:24.06:0,24,740	1/1:5,19:24:29.10:240,29,0	1/1:5,14:19:23.95:550,24,0	1/1:4,9:13:18.06:516,18,0	1/1:20,15:35:44.58:621,45,0	1/1:6,22:28:54.12:1433,54,0	1/1:9,24:33:63.22:1763,63,0	1/1:4,16:20:35.81:704,36,0	1/1:3,11:14:33.11:947,33,0	1/1:4,6:10:18.06:517,18,0	1/1:4,9:13:21.07:601,21,0	1/1:4,13:17:30.03:791,30,0	1/1:3,10:13:24.08:689,24,0	1/1:10,8:18:9.03:258,9,0	1/1:1,0:1:3.01:82,3,0	1/1:9,14:23:39.04:861,39,0	1/1:7,14:20:35.92:826,36,0	1/1:1,5:6:5.95:102,6,0	1/1:5,8:13:29.79:534,30,0	1/1:4,9:13:29.84:593,30,0	1/1:5,9:14:8.08:194,8,0	1/1:0,9:9:20.94:466,21,0	1/1:6,16:22:45.14:1205,45,0	1/1:10,25:35:51.18:1463,51,0	1/1:6,2:8:5.97:105,6,0
chr10	26417306	.	TG	T	18701.82	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=1.923;DP=518;FS=1.990;HRun=1;HaplotypeScore=95.3333;InbreedingCoeff=0.9949;MQ=88.58;MQ0=0;MQRankSum=-10.838;QD=39.37;ReadPosRankSum=6.576;VQSLOD=4.6859;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,26:26:72.24:1006,72,0	1/1:0,13:13:36.12:503,36,0	0/0:24,0:24:72.25:0,72,1151	0/0:19,0:19:57.19:0,57,876	1/1:0,11:11:33.11:461,33,0	1/1:0,17:17:48.16:671,48,0	1/1:0,12:12:33.11:462,33,0	1/1:0,31:31:93.30:1284,93,0	1/1:0,26:26:72.24:1005,72,0	1/1:0,32:32:90.30:1257,90,0	1/1:0,20:20:54.18:753,54,0	1/1:0,13:13:36.12:503,36,0	1/1:0,11:11:33.11:462,33,0	1/1:0,18:18:51.17:712,51,0	1/1:0,17:17:48.16:670,48,0	1/1:0,13:13:39.13:545,39,0	1/1:0,13:13:39.13:544,39,0	1/1:0,8:8:18.06:252,18,0	1/1:0,15:15:45.15:629,45,0	1/1:0,23:23:63.21:881,63,0	1/1:0,23:23:69.23:964,69,0	1/1:0,20:20:54.18:755,54,0	1/1:0,15:15:42.14:587,42,0	1/1:0,19:19:42.14:587,42,0	1/1:0,13:13:36.12:502,36,0	1/1:0,27:27:81.25:1114,81,0	1/1:0,29:29:84.28:1173,84,0	1/1:0,10:10:30.10:420,30,0
chr10	26417520	.	TC	T	15441.74	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-5.556;DP=545;FS=3.301;HRun=5;HaplotypeScore=58.8691;InbreedingCoeff=0.9776;MQ=85.88;MQ0=0;MQRankSum=-9.462;QD=30.34;ReadPosRankSum=6.175;VQSLOD=4.9346;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,18:19:51.15:578,51,0	1/1:0,8:8:17.87:204,18,0	0/0:20,0:20:51.14:0,51,663	0/0:16,0:16:44.80:0,45,560	1/1:2,31:33:81.20:905,81,0	1/1:0,23:23:66.19:748,66,0	1/1:1,8:9:24.07:272,24,0	1/1:4,18:22:54.14:605,54,0	1/1:0,16:16:45.13:510,45,0	1/1:1,31:32:90.26:1019,90,0	1/1:0,25:25:69.20:782,69,0	1/1:0,19:19:51.15:578,51,0	1/1:0,23:23:69.20:783,69,0	1/1:0,21:21:54.15:612,54,0	1/1:1,19:20:54.15:613,54,0	1/1:0,11:11:30.09:340,30,0	1/1:0,11:11:30.09:340,30,0	1/1:0,9:9:27.08:306,27,0	1/1:0,16:16:48.12:535,48,0	1/1:3,33:36:87.21:973,87,0	1/1:0,11:11:30.09:340,30,0	1/1:0,27:27:72.16:802,72,0	1/1:0,22:22:63.18:714,63,0	1/1:0,5:5:12.03:136,12,0	1/1:0,17:17:42.12:476,42,0	1/1:1,26:27:78.21:875,78,0	1/1:1,35:36:92.93:1054,93,0	1/1:1,10:11:30.09:340,30,0
chr10	26417958	.	TA	T	16464.97	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=6.517;DP=492;FS=24.909;HRun=1;HaplotypeScore=131.5722;InbreedingCoeff=0.9777;MQ=87.31;MQ0=0;MQRankSum=-9.891;QD=36.75;ReadPosRankSum=5.264;VQSLOD=2.6991;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,13:13:33.07:438,33,0	1/1:0,13:13:39.13:545,39,0	0/0:19,0:19:55.03:0,55,707	0/0:25,0:25:47.01:0,47,702	1/1:0,19:19:51.02:625,51,0	1/1:0,21:21:57.19:795,57,0	1/1:0,17:17:48.16:671,48,0	1/1:0,23:23:66.21:906,66,0	1/1:0,14:14:36.12:503,36,0	1/1:1,28:29:81.23:1078,81,0	1/1:0,28:28:81.23:1109,81,0	1/1:0,12:12:36.08:480,36,0	1/1:0,11:11:27.09:375,27,0	1/1:2,10:12:27:336,27,0	1/1:0,13:13:36.08:480,36,0	1/1:0,18:18:42.14:586,42,0	1/1:0,19:19:45.15:628,45,0	1/1:0,4:4:12.04:167,12,0	1/1:6,16:22:52.74:728,53,0	1/1:0,30:30:90.07:1165,90,0	1/1:0,8:8:18.06:251,18,0	1/1:0,11:11:33.11:460,33,0	1/1:0,22:22:60.16:815,60,0	1/1:0,15:15:42.14:585,42,0	1/1:0,12:12:36.08:481,36,0	1/1:0,24:24:69.23:962,69,0	1/1:0,28:28:69.23:961,69,0	1/1:0,10:10:24.08:335,24,0
chr10	26418089	.	T	TAC	1743.53	PASS	AB=0.871;AC=35;AF=0.700;AN=50;BaseQRankSum=-3.496;DP=541;FS=0.000;HRun=0;HaplotypeScore=121.9918;InbreedingCoeff=0.0750;MQ=60.02;MQ0=16;MQRankSum=0.876;QD=4.52;ReadPosRankSum=-0.145;VQSLOD=2.6021;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:30:14.91:145,15,0	1/1:3,3:6:2.59:44,3,0	./.	./.	0/1:24,1:24:23.25:36,0,23	0/1:20,8:28:32.50:77,0,32	0/1:19,2:21:26.14:38,0,26	0/0:15,0:15:2.94:0,3,18	0/1:17,0:17:4.65:55,0,5	1/1:14,0:14:9.03:130,9,0	1/1:9,2:10:5.82:79,6,0	1/1:8,0:8:2.99:23,3,0	1/1:13,2:15:8.96:88,9,0	1/1:16,1:17:5.99:66,6,0	0/0:20,0:20:11.27:0,11,66	0/1:11,6:17:15.86:79,0,16	0/0:19,0:19:5.68:0,6,28	1/1:11,0:11:0.47:1,0,0	./.	0/1:20,4:24:22.05:223,0,22	1/1:23,10:32:6.02:88,6,0	1/1:25,2:27:14.80:148,15,0	1/1:13,0:13:2.98:21,3,0	1/1:9,13:23:17.98:265,18,0	0/0:11,6:17:0:0,0,0	1/1:23,0:23:9.02:111,9,0	0/1:13,3:17:35.29:35,0,37	1/1:5,0:5:9.50:132,10,0
chr10	26418461	.	T	TACTCTC	31036.70	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-3.640;DP=378;FS=3.218;HRun=0;HaplotypeScore=68.3850;InbreedingCoeff=0.7858;MQ=55.07;MQ0=0;MQRankSum=-4.799;QD=84.57;ReadPosRankSum=3.542;VQSLOD=6.2251;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,9:12:24.08:900,24,0	1/1:1,2:4:9.03:337,9,0	0/0:3,0:4:6.01:0,6,102	0/0:7,0:7:14.53:0,15,392	1/1:4,20:28:41.97:1560,42,0	1/1:1,16:17:45.15:1684,45,0	1/1:2,7:12:24.08:899,24,0	1/1:7,10:19:54.17:1742,54,0	1/1:0,10:13:30.10:1125,30,0	1/1:8,8:17:51.17:1808,51,0	1/1:6,10:16:36.12:1332,36,0	1/1:2,9:11:24.08:900,24,0	1/1:2,7:12:27.09:1010,27,0	1/1:3,10:14:33.11:1237,33,0	1/1:3,14:18:45.15:1687,45,0	1/1:2,8:12:21.04:787,21,0	1/1:1,4:6:12.04:437,12,0	1/1:2,1:3:6.02:225,6,0	1/1:2,8:11:30.10:1052,30,0	1/1:5,18:25:63.22:2348,63,0	1/1:3,5:8:15.05:562,15,0	1/1:3,13:17:42.14:1571,42,0	1/1:6,12:19:36.12:1332,36,0	1/1:2,3:6:6.02:221,6,0	1/1:2,11:14:30.10:1125,30,0	1/1:1,17:18:54.19:2009,54,0	1/1:5,17:23:63.22:2362,63,0	1/1:2,6:12:21.07:784,21,0
chr10	26418645	.	C	CA	16010.03	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=5.088;DP=400;FS=5.464;HRun=5;HaplotypeScore=152.2531;InbreedingCoeff=0.9263;MQ=72.95;MQ0=0;MQRankSum=-8.043;QD=42.92;ReadPosRankSum=3.948;VQSLOD=2.3079;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,8:8:21.07:335,21,0	1/1:0,8:8:24.08:382,24,0	0/0:15,0:15:25.31:0,25,455	0/0:12,0:12:32.90:0,33,385	1/1:1,32:33:87.29:1369,87,0	1/1:1,12:13:36.12:562,36,0	1/1:1,6:7:15.05:239,15,0	1/1:4,16:20:60.12:883,60,0	1/1:0,14:14:42.14:666,42,0	1/1:2,26:28:81.23:1235,81,0	1/1:1,19:20:51.17:796,51,0	1/1:0,8:8:24.08:381,24,0	1/1:1,9:10:27.09:430,27,0	1/1:0,9:9:27.09:429,27,0	1/1:2,9:11:27.09:417,27,0	1/1:0,8:8:24.08:381,24,0	1/1:0,8:8:21.07:334,21,0	1/1:1,5:6:14.02:237,14,0	1/1:5,19:24:63.18:963,63,0	1/1:1,32:33:93.32:1479,93,0	1/1:2,2:4:12.04:191,12,0	1/1:0,10:10:30.10:477,30,0	1/1:0,18:19:51.17:805,51,0	1/1:0,4:4:9.03:143,9,0	1/1:0,25:25:72.24:1134,72,0	1/1:2,19:21:57.19:908,57,0	1/1:4,12:16:36.12:559,36,0	1/1:1,5:6:18.06:276,18,0
chr10	26419405	.	TTTGTTTTTTTTTTG	T	4604.83	PASS	AB=1.000;AC=45;AF=0.833;AN=54;BaseQRankSum=-4.393;DP=376;FS=1.500;HRun=0;HaplotypeScore=118.4985;InbreedingCoeff=0.1730;MQ=67.04;MQ0=15;MQRankSum=2.368;QD=16.68;ReadPosRankSum=0.940;VQSLOD=3.0961;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:6,0:6:7.79:41,8,0	1/1:5,0:5:14.77:218,15,0	0/0:45,0:13:33.39:0,33,422	0/0:47,0:15:1.62:0,2,133	1/1:24,0:24:38.28:528,38,0	1/1:6,0:6:15:204,15,0	1/1:5,0:5:3:27,3,0	1/1:12,0:12:23.99:238,24,0	0/1:5,0:5:19.34:37,0,19	1/1:14,0:13:26.12:333,26,0	1/1:15,0:14:17.11:154,17,0	0/1:5,0:5:19.15:44,0,19	1/1:7,0:7:0.21:160,0,0	./.	0/1:8,0:7:7.59:8,0,405	0/1:12,0:12:1.49:232,0,1	1/1:2,17:19:5.58:238,6,0	1/1:2,0:2:2.27:23,2,0	0/1:14,0:13:56.24:172,0,56	1/1:18,0:18:24.85:253,25,0	1/1:10,0:8:19.82:182,20,0	1/1:6,0:6:7.26:69,7,0	1/1:17,0:17:39.98:386,40,0	1/1:8,0:8:15.36:117,15,0	1/1:10,0:10:15.19:186,15,0	1/1:20,0:20:31.21:446,31,0	1/1:22,0:22:29.64:283,30,0	1/1:6,0:6:3.88:26,4,0
chr10	26419406	.	TTGTTTTTTTTTTG	T	5756.26	PASS	AB=1.000;AC=47;AF=0.870;AN=54;BaseQRankSum=-4.858;DP=375;FS=2.784;HRun=0;HaplotypeScore=107.5497;InbreedingCoeff=0.3320;MQ=66.81;MQ0=16;MQRankSum=0.698;QD=21.01;ReadPosRankSum=0.979;VQSLOD=3.4535;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:7,0:7:14.97:94,15,0	1/1:4,1:5:14.90:241,15,0	0/0:46,0:13:31.36:0,31,367	0/0:47,0:15:3.90:0,4,108	1/1:23,0:23:59.36:630,59,0	1/1:6,0:6:15.05:230,15,0	1/1:6,0:6:3:27,3,0	1/1:11,0:11:23.98:238,24,0	1/1:5,0:5:4.59:57,5,0	1/1:12,0:11:32.43:410,32,0	1/1:15,0:14:23.42:208,23,0	0/1:5,0:5:3.78:80,0,4	1/1:6,0:6:10.57:201,11,0	./.	0/1:9,0:8:19.55:20,0,336	1/1:12,0:12:26:339,26,0	1/1:19,0:19:5.49:218,5,0	1/1:2,0:2:5.59:34,6,0	0/1:13,0:12:24.41:224,0,24	1/1:17,0:17:32.87:290,33,0	1/1:11,0:8:19.85:252,20,0	1/1:6,0:6:8.98:86,9,0	1/1:16,1:17:43.86:536,44,0	1/1:8,0:8:16.09:147,16,0	1/1:10,0:10:26.65:262,27,0	1/1:4,16:20:52.32:586,52,0	1/1:22,0:22:29.68:308,30,0	1/1:7,0:7:5.87:39,6,0
chr10	26419416	.	TTTG	T	5294.66	PASS	AB=1.000;AC=51;AF=0.944;AN=54;BaseQRankSum=-3.521;DP=478;FS=6.283;HRun=0;HaplotypeScore=80.5025;InbreedingCoeff=0.0963;MQ=65.04;MQ0=17;MQRankSum=3.710;QD=11.19;ReadPosRankSum=-3.248;VQSLOD=2.7127;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,0:10:24.76:164,25,0	1/1:7,0:7:17.01:154,17,0	0/1:57,0:13:3.71:4,0,66	0/1:54,0:17:21.67:26,0,22	1/1:26,0:26:74.61:605,75,0	1/1:8,0:8:21.01:188,21,0	./.	1/1:13,0:13:24.61:173,25,0	1/1:5,1:6:8.33:119,8,0	1/1:21,0:20:52.11:387,52,0	1/1:27,0:26:51.92:337,52,0	1/1:9,0:9:14.21:193,14,0	1/1:9,0:9:26.95:224,27,0	1/1:12,0:12:1.55:4,2,0	0/1:8,0:7:30.77:31,0,35	1/1:16,0:16:44.82:378,45,0	1/1:19,0:19:6.01:58,6,0	1/1:1,0:1:2.94:18,3,0	1/1:15,0:14:36.07:278,36,0	1/1:21,0:21:36.45:227,36,0	1/1:17,0:14:32.27:276,32,0	1/1:10,0:10:14.96:85,15,0	1/1:24,0:24:58.62:479,59,0	1/1:8,0:8:10.23:80,10,0	1/1:15,0:15:40.26:294,40,0	1/1:20,0:20:53.69:415,54,0	1/1:25,0:25:6.02:76,6,0	1/1:14,0:14:2.98:22,3,0
chr10	26419417	.	TTG	T	5667.41	PASS	AB=1.000;AC=51;AF=0.944;AN=54;BaseQRankSum=-3.831;DP=474;FS=4.526;HRun=0;HaplotypeScore=72.2367;InbreedingCoeff=0.1420;MQ=64.03;MQ0=17;MQRankSum=3.140;QD=12.08;ReadPosRankSum=-2.531;VQSLOD=3.9564;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,0:10:24.48:166,24,0	1/1:6,1:7:17.90:154,18,0	0/1:56,0:13:3.43:3,0,57	0/1:53,0:16:5.78:6,0,23	1/1:25,0:25:74.70:626,75,0	1/1:8,0:8:21.01:188,21,0	./.	1/1:12,0:12:24.63:175,25,0	1/1:6,0:6:16.20:131,16,0	1/1:22,0:21:53.29:419,53,0	1/1:27,0:26:53.35:356,53,0	1/1:9,0:9:13.48:194,13,0	1/1:9,0:9:26.95:224,27,0	1/1:1,11:12:2.97:20,3,0	0/1:8,0:7:4.54:53,0,5	1/1:14,2:16:44.88:388,45,0	1/1:19,0:19:5.97:44,6,0	1/1:1,0:1:2.94:18,3,0	1/1:15,0:14:37.63:303,38,0	1/1:19,1:20:40.48:281,40,0	1/1:16,0:13:32.88:281,33,0	1/1:0,10:10:17.78:118,18,0	1/1:22,1:23:62.09:528,62,0	1/1:8,0:8:10.45:81,10,0	1/1:15,0:15:41.84:352,42,0	1/1:20,0:20:56.32:446,56,0	1/1:2,22:24:6.02:70,6,0	1/1:16,0:16:3.01:41,3,0
chr10	26419418	.	TG	T	5666.92	PASS	AB=0.982;AC=52;AF=0.963;AN=54;BaseQRankSum=-4.009;DP=471;FS=0.000;HRun=1;HaplotypeScore=66.8102;InbreedingCoeff=0.0193;MQ=64.14;MQ0=18;MQRankSum=2.365;QD=12.16;ReadPosRankSum=-0.962;VQSLOD=2.6883;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:11:24.78:165,25,0	1/1:7,0:7:17.65:144,18,0	0/1:56,1:13:13.37:13,0,31	0/1:53,1:16:9.13:9,0,17	1/1:26,0:26:77.67:636,78,0	1/1:8,0:8:21.01:188,21,0	./.	1/1:2,9:12:24.65:176,25,0	1/1:5,1:6:17.92:141,18,0	1/1:2,20:21:53.25:415,53,0	1/1:1,26:26:53.35:357,53,0	1/1:8,1:9:12.93:193,13,0	1/1:9,0:9:26.95:224,27,0	1/1:11,1:12:2.97:20,3,0	1/1:8,0:7:15.23:93,15,0	1/1:15,1:16:44.84:365,45,0	1/1:18,0:19:5.57:31,6,0	1/1:1,0:1:2.94:18,3,0	1/1:2,13:14:37.59:305,38,0	1/1:1,19:20:41.65:308,42,0	1/1:15,0:12:32.80:273,33,0	1/1:10,0:10:17.78:118,18,0	1/1:22,0:22:59.86:507,60,0	1/1:7,0:7:10.53:82,11,0	1/1:14,0:14:38.93:337,39,0	1/1:20,0:20:56.86:466,57,0	1/1:23,0:23:5.99:52,6,0	1/1:0,16:16:3.01:32,3,0
chr10	26419705	.	CCA	C	17059.47	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=3.444;DP=509;FS=2.286;HRun=0;HaplotypeScore=116.9091;InbreedingCoeff=0.9792;MQ=83.21;MQ0=0;MQRankSum=-9.680;QD=36.37;ReadPosRankSum=6.023;VQSLOD=6.9045;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,6:6:18.06:252,18,0	1/1:1,12:13:36.12:504,36,0	0/0:20,0:20:54.16:0,54,869	0/0:20,0:20:48.16:0,48,727	1/1:2,25:27:72.20:985,72,0	1/1:0,20:20:54.18:756,54,0	1/1:1,16:17:48.16:672,48,0	1/1:1,19:20:57.18:782,57,0	1/1:3,17:20:51.17:714,51,0	1/1:1,25:26:75.25:1042,75,0	1/1:1,28:29:84.24:1154,84,0	1/1:1,13:14:39.13:546,39,0	1/1:2,15:17:39.13:546,39,0	1/1:4,9:13:30.10:419,30,0	1/1:0,23:23:60.20:840,60,0	1/1:0,14:14:39.13:546,39,0	1/1:3,18:20:48.16:672,48,0	1/1:0,6:6:12.04:168,12,0	1/1:6,13:19:36.12:502,36,0	1/1:1,22:23:60.16:818,60,0	1/1:0,12:12:30.10:420,30,0	1/1:0,16:16:45.15:630,45,0	1/1:1,19:20:48.16:672,48,0	1/1:0,11:11:33.11:462,33,0	1/1:2,22:24:60.20:840,60,0	1/1:2,25:27:72.20:986,72,0	1/1:1,19:20:51.17:714,51,0	1/1:0,11:11:30.10:420,30,0
chr10	26419833	.	A	ACTTT	32752.12	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=4.980;DP=524;FS=0.000;HRun=0;HaplotypeScore=157.6276;InbreedingCoeff=0.8201;MQ=78.51;MQ0=0;MQRankSum=-10.095;QD=68.09;ReadPosRankSum=3.990;VQSLOD=6.3963;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,5:5:15.05:404,15,0	1/1:1,10:11:33.11:888,33,0	0/0:15,0:15:36.12:0,36,641	0/0:28,0:28:75.22:0,75,1342	1/1:6,23:29:84.16:2015,84,0	1/1:5,15:21:54.19:1411,54,0	1/1:6,7:14:33.11:800,33,0	1/1:10,16:27:72.20:1850,72,0	1/1:1,19:20:54.19:1453,54,0	1/1:9,22:32:84.25:2028,84,0	1/1:5,20:26:66.23:1689,66,0	1/1:6,10:16:42.14:1130,42,0	1/1:4,11:16:42.14:1103,42,0	1/1:2,10:12:36.12:952,36,0	1/1:6,22:29:78.23:1997,78,0	1/1:7,8:15:36.08:851,36,0	1/1:3,3:7:12.04:262,12,0	1/1:2,0:2:2.99:24,3,0	1/1:6,9:15:36.12:886,36,0	1/1:5,29:34:96.33:2552,96,0	1/1:2,5:8:18.06:444,18,0	1/1:4,18:24:66.23:1745,66,0	1/1:4,21:27:69.03:1832,69,0	1/1:0,7:8:18.06:484,18,0	1/1:3,16:21:54.19:1446,54,0	1/1:9,21:31:84.22:2088,84,0	1/1:3,25:30:87.30:2340,87,0	1/1:0,1:1:3.01:81,3,0
chr10	26420244	.	CTGT	C	15949.64	PASS	AB=1.000;AC=54;AF=0.964;AN=56;BaseQRankSum=-0.214;DP=471;FS=2.499;HRun=0;HaplotypeScore=87.0460;InbreedingCoeff=0.1578;MQ=70.32;MQ0=1;MQRankSum=-5.834;QD=33.86;ReadPosRankSum=3.660;VQSLOD=5.4768;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,20:23:57.19:891,57,0	1/1:0,5:5:9.03:141,9,0	0/1:14,0:11:6.32:6,0,305	0/1:8,0:7:11.29:11,0,224	1/1:3,26:29:68.37:986,68,0	1/1:1,22:23:51.17:798,51,0	1/1:0,14:14:39.13:610,39,0	1/1:3,30:32:84.17:1097,84,0	1/1:4,10:14:27.09:422,27,0	1/1:1,24:25:72.23:1080,72,0	1/1:3,22:25:54.14:817,54,0	1/1:0,8:8:21.07:328,21,0	1/1:0,13:13:30.10:469,30,0	1/1:0,10:10:21.07:328,21,0	1/1:3,13:16:27.09:422,27,0	1/1:1,6:7:18.06:281,18,0	1/1:2,14:16:33.11:516,33,0	1/1:1,3:4:6.02:94,6,0	1/1:3,16:19:48.13:669,48,0	1/1:3,29:32:81.23:1230,81,0	1/1:2,10:12:24.08:375,24,0	1/1:0,9:9:26.99:367,27,0	1/1:0,27:27:75.26:1173,75,0	1/1:1,8:9:21.07:328,21,0	1/1:2,13:15:33.11:516,33,0	1/1:3,12:15:36.10:538,36,0	1/1:1,14:15:36.12:563,36,0	1/1:6,25:31:57.19:892,57,0
chr10	26422053	.	AT	A	452.89	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.602;DP=543;FS=3.271;HRun=6;HaplotypeScore=53.4496;InbreedingCoeff=0.9748;MQ=74.85;MQ0=0;MQRankSum=-0.238;QD=21.57;ReadPosRankSum=-0.520;VQSLOD=2.7247;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:36.12:0,36,474	0/0:18,0:18:54.18:0,54,708	0/0:16,0:16:48.09:0,48,577	0/0:8,0:8:17.61:0,18,177	0/0:27,0:27:75.24:0,75,987	0/0:18,0:18:51.15:0,51,652	0/0:11,0:11:33.11:0,33,432	0/0:25,0:25:69.21:0,69,883	0/0:13,0:13:39.13:0,39,513	0/0:24,0:24:63.20:0,63,816	0/0:30,0:30:78.24:0,78,1011	0/0:5,0:5:15.05:0,15,197	0/0:20,0:20:60.20:0,60,789	0/0:22,0:22:63.20:0,63,829	1/1:1,20:21:51.13:548,51,0	0/0:13,0:13:39.13:0,39,513	0/0:26,0:26:72.22:0,72,926	0/0:12,0:12:33.11:0,33,434	0/0:22,0:22:54.18:0,54,708	0/0:28,0:28:72.19:0,72,927	0/0:16,0:16:48.09:0,48,610	0/0:18,0:18:54.16:0,54,696	0/0:34,0:34:96.28:0,96,1244	0/0:11,0:11:30.10:0,30,395	0/0:21,0:21:63.18:0,63,810	0/0:24,0:24:69.22:0,69,904	0/0:30,0:30:87.24:0,87,1093	0/0:17,0:17:51.17:0,51,671
chr10	26422771	.	A	AG	20452.76	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-3.045;DP=476;FS=9.765;HRun=0;HaplotypeScore=71.4486;InbreedingCoeff=0.9615;MQ=64.03;MQ0=0;MQRankSum=-5.410;QD=44.08;ReadPosRankSum=3.055;VQSLOD=4.8886;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,7:8:18.06:282,18,0	1/1:1,4:5:15.04:216,15,0	0/0:7,0:6:18.06:0,18,251	0/0:5,0:5:12.04:0,12,166	1/1:0,27:27:78.27:1245,78,0	1/1:2,20:22:57.18:885,57,0	1/1:0,9:9:27.09:431,27,0	1/1:0,26:26:78.21:1154,78,0	1/1:0,10:10:30.10:479,30,0	1/1:0,24:24:72.25:1142,72,0	1/1:2,21:23:60.19:935,60,0	1/1:1,9:10:27.08:408,27,0	1/1:1,8:9:24.08:373,24,0	1/1:1,11:12:36.12:574,36,0	1/1:0,26:26:75.26:1199,75,0	1/1:2,8:10:24.08:383,24,0	1/1:2,14:16:39.13:622,39,0	1/1:1,16:17:48.16:766,48,0	1/1:2,15:17:51.12:766,51,0	1/1:2,28:30:81.28:1289,81,0	1/1:4,8:12:27.09:426,27,0	1/1:6,10:16:39.13:617,39,0	1/1:3,23:26:75.23:1145,75,0	1/1:0,8:8:24.08:383,24,0	1/1:0,24:24:72.25:1145,72,0	1/1:3,26:28:84.29:1342,84,0	1/1:4,36:40:99:1862,117,0	1/1:0,8:8:24.08:383,24,0
chr10	26422826	.	TTTTA	T	16688	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=7.128;DP=444;FS=3.945;HRun=0;HaplotypeScore=104.7339;InbreedingCoeff=0.9557;MQ=63.69;MQ0=2;MQRankSum=-5.471;QD=47.82;ReadPosRankSum=3.893;VQSLOD=5.5182;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,4:6:18.02:300,18,0	1/1:1,9:10:24.08:431,24,0	0/0:8,0:8:24.08:0,24,590	0/0:5,0:5:8.49:0,8,143	1/1:9,10:19:42.13:739,42,0	1/1:1,21:22:63.22:1174,63,0	1/1:0,8:8:24.08:446,24,0	0/0:34,0:34:96.31:0,96,2375	1/1:0,7:7:21.07:392,21,0	1/1:3,14:17:48.16:892,48,0	1/1:3,15:18:48.16:865,48,0	1/1:0,12:11:27.09:501,27,0	1/1:0,12:12:36.12:673,36,0	1/1:0,10:9:27.09:505,27,0	0/0:22,0:22:63.20:0,63,1561	1/1:1,11:12:33.11:618,33,0	0/0:26,0:26:75.25:0,75,1919	1/1:2,14:16:39.04:691,39,0	1/1:4,17:21:57.18:989,57,0	1/1:2,27:29:81.28:1459,81,0	1/1:0,11:11:27.01:416,27,0	1/1:2,15:17:42.06:711,42,0	1/1:3,19:22:63.20:1126,63,0	1/1:1,3:4:6.02:113,6,0	1/1:1,11:12:36.12:673,36,0	1/1:6,16:21:51.17:925,51,0	1/1:3,29:32:84.23:1486,84,0	1/1:0,10:10:30.10:562,30,0
chr10	26422828	.	TTA	T	6561.21	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=11.941;DP=438;FS=4.657;HRun=0;HaplotypeScore=121.1151;InbreedingCoeff=0.9586;MQ=63.83;MQ0=2;MQRankSum=-5.381;QD=19.35;ReadPosRankSum=3.959;VQSLOD=4.8667;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,0:6:17.85:126,18,0	1/1:9,0:9:23.80:168,24,0	0/0:8,0:8:24.08:0,24,399	0/0:5,0:5:9.72:0,10,115	1/1:17,0:17:41.65:302,42,0	1/1:22,0:22:62.50:446,63,0	1/1:8,0:8:23.81:169,24,0	0/0:36,0:36:99:0,99,1623	1/1:7,0:7:20.83:148,21,0	1/1:18,0:18:50.64:372,51,0	1/1:17,0:17:47.64:344,48,0	1/1:12,0:11:26.78:190,27,0	1/1:12,0:12:35.71:254,36,0	1/1:10,0:9:26.78:191,27,0	0/0:24,0:24:69.18:0,69,1105	1/1:12,0:12:32.74:233,33,0	0/0:26,0:26:75.25:0,75,1305	1/1:16,0:16:38.68:274,39,0	1/1:18,1:19:56.64:421,57,0	1/1:28,0:28:78.26:541,78,0	1/1:11,0:11:26.76:187,27,0	1/1:17,0:17:41.65:294,42,0	1/1:21,1:22:62.49:446,62,0	1/1:4,0:4:5.95:43,6,0	1/1:12,0:12:35.71:255,36,0	1/1:18,1:18:50.62:366,51,0	1/1:30,1:31:82.18:580,82,0	1/1:10,0:10:29.76:212,30,0
chr10	26423027	.	A	AT	738.95	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=-3.029;DP=386;FS=4.324;HRun=0;HaplotypeScore=58.5240;InbreedingCoeff=0.6208;MQ=75.38;MQ0=0;MQRankSum=1.682;QD=27.37;ReadPosRankSum=1.856;VQSLOD=4.1940;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:27.08:0,27,362	0/0:2,0:2:6.02:0,6,84	0/0:12,0:11:26.90:0,27,285	0/1:6,0:6:4.65:5,0,86	0/0:27,0:27:81.26:0,81,1116	0/0:14,0:14:42.14:0,42,586	0/0:5,0:5:15.04:0,15,194	0/0:24,0:24:72.24:0,72,1006	0/0:12,0:12:36.12:0,36,502	0/0:25,0:25:75.25:0,75,1034	0/0:17,0:17:51.10:0,51,644	0/0:10,0:10:27.08:0,27,348	0/0:9,0:9:27.09:0,27,376	0/0:12,0:12:36.12:0,36,503	1/1:0,21:21:57.19:833,57,0	0/0:11,0:11:33.10:0,33,446	0/0:18,0:18:54.14:0,54,714	0/0:13,0:13:39.04:0,39,482	0/0:8,0:8:21.07:0,21,293	0/0:17,0:17:51.14:0,51,653	0/0:8,0:8:24.08:0,24,334	0/0:7,0:7:21.06:0,21,276	0/0:17,0:17:51.17:0,51,712	0/0:3,0:3:9.03:0,9,126	0/0:18,0:18:54.17:0,54,740	0/0:17,0:17:51.15:0,51,669	0/0:34,0:34:96.31:0,96,1325	0/0:10,0:10:30.08:0,30,400
chr10	26423312	.	TTAA	T	333.63	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.383;DP=332;FS=0.000;HRun=0;HaplotypeScore=44.6190;InbreedingCoeff=0.5129;MQ=63.64;MQ0=0;MQRankSum=-1.028;QD=33.36;ReadPosRankSum=0.922;VQSLOD=3.4467;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:7:21.07:0,21,459	0/0:6,0:6:15.05:0,15,328	0/0:2,0:2:4.26:0,4,48	0/0:4,0:4:6.02:0,6,86	0/0:20,0:20:57.20:0,57,1239	0/0:14,0:14:33.11:0,33,709	0/0:4,0:4:9.03:0,9,184	0/0:23,0:23:63.22:0,63,1326	0/0:11,0:11:27.08:0,27,527	0/0:20,0:20:54.19:0,54,1181	0/0:22,0:22:63.20:0,63,1337	0/0:10,0:10:30.09:0,30,596	0/0:13,0:13:36.12:0,36,785	0/0:11,0:11:33.11:0,33,720	1/1:0,10:10:27.09:427,27,0	0/0:5,0:5:15.05:0,15,328	0/0:14,0:14:39.13:0,39,807	0/0:20,0:20:51.16:0,51,1073	0/0:10,0:10:30.10:0,30,610	0/0:20,0:20:48.16:0,48,1023	0/0:1,0:1:3.01:0,3,66	0/0:1,0:1:3.01:0,3,66	0/0:10,0:10:21.07:0,21,453	0/0:1,0:1:3.01:0,3,66	0/0:22,0:22:66.23:0,66,1424	0/0:21,0:21:57.20:0,57,1247	0/0:14,0:14:33.11:0,33,702	0/0:16,0:16:48.16:0,48,1039
chr10	26423708	.	A	AT	253.73	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=4.235;DP=438;FS=4.463;HRun=7;HaplotypeScore=42.9545;InbreedingCoeff=0.6123;MQ=72.46;MQ0=0;MQRankSum=0.339;QD=9.06;ReadPosRankSum=-0.233;VQSLOD=0.2584;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:36.04:0,36,342	0/0:7,0:7:21.03:0,21,203	0/0:13,0:7:14.81:0,15,113	0/1:13,0:12:33.30:33,0,93	0/0:24,0:24:66.09:0,66,631	0/0:22,0:22:63.10:0,63,608	0/0:10,0:10:30.05:0,30,289	0/0:28,0:28:66.09:0,66,637	0/0:13,0:13:36.05:0,36,342	0/0:14,0:14:39.06:0,39,377	0/0:25,0:25:60.09:0,60,579	0/0:11,0:11:30.05:0,30,290	0/0:11,0:11:24.03:0,24,232	0/0:18,0:18:51.08:0,51,492	1/1:2,12:14:27.08:326,27,0	0/0:9,0:9:27.04:0,27,260	0/0:11,0:11:24.03:0,24,231	0/0:10,0:10:24.03:0,24,230	0/0:24,0:24:63.08:0,63,600	0/0:25,0:25:72.09:0,72,684	0/0:4,0:4:12.02:0,12,116	0/0:10,0:10:24.03:0,24,226	0/0:12,0:12:36.06:0,36,348	0/0:5,0:5:15.02:0,15,145	0/0:19,0:19:54.09:0,54,521	0/0:22,0:22:60.07:0,60,573	0/0:32,0:32:84.12:0,84,805	0/0:17,0:17:36.05:0,36,348
chr10	26423849	.	A	ATTTG	900.81	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.020;DP=555;FS=1.081;HRun=0;HaplotypeScore=88.7556;InbreedingCoeff=0.9297;MQ=88.32;MQ0=1;MQRankSum=-6.041;QD=42.90;ReadPosRankSum=-0.009;VQSLOD=3.9814;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:93.25:0,93,1615	0/0:15,0:15:45.14:0,45,780	0/0:20,0:20:45.15:0,45,787	0/0:21,0:21:51.16:0,51,861	0/0:26,0:26:72.23:0,72,1261	0/0:26,0:26:75.26:0,75,1339	0/0:5,0:5:9.03:0,9,162	0/0:12,0:12:33.11:0,33,585	0/0:16,0:16:36.12:0,36,647	0/0:26,0:26:69.24:0,69,1237	0/0:31,0:31:78.25:0,78,1373	0/0:15,0:15:45.15:0,45,794	0/0:18,0:18:51.16:0,51,876	0/0:17,0:17:51.16:0,51,883	1/1:3,16:21:39.13:996,39,0	0/0:11,0:11:33.11:0,33,593	0/0:24,0:24:63.17:0,63,1069	0/0:6,0:6:15.05:0,15,270	0/0:18,0:18:54.14:0,54,908	0/0:30,0:30:78.25:0,78,1362	0/0:17,0:16:42.14:0,42,755	0/0:22,0:22:60.19:0,60,1049	0/0:27,0:27:72.21:0,72,1215	0/0:18,0:18:48.16:0,48,862	0/0:17,0:17:48.16:0,48,862	0/0:23,0:23:69.23:0,69,1208	0/0:26,0:26:66.23:0,66,1179	0/0:11,0:11:27.07:0,27,454
chr10	26432662	.	TC	T	684.07	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.425;DP=575;FS=4.177;HRun=3;HaplotypeScore=59.3588;InbreedingCoeff=0.9968;MQ=82.57;MQ0=0;MQRankSum=-2.268;QD=29.74;ReadPosRankSum=1.415;VQSLOD=3.2808;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,108,1483	0/0:11,0:11:33.11:0,33,470	0/0:20,0:20:47.39:0,47,687	0/0:15,0:15:42.08:0,42,562	0/0:33,0:33:84.27:0,84,1183	0/0:27,0:27:75.23:0,75,1043	0/0:15,0:15:45.15:0,45,647	0/0:27,0:27:75.22:0,75,1014	0/0:27,0:27:75.25:0,75,1079	0/0:31,0:30:87.26:0,87,1201	0/0:22,0:22:57.13:0,57,770	0/0:21,0:21:57.19:0,57,820	0/0:20,0:20:60.17:0,60,825	0/0:18,0:18:54.16:0,54,728	1/1:0,23:23:63.20:779,63,0	0/0:17,0:17:51.17:0,51,733	0/0:10,0:10:30.07:0,30,410	0/0:15,0:15:42.14:0,42,600	0/0:23,0:23:60.20:0,60,862	0/0:27,0:26:63.21:0,63,903	0/0:18,0:18:54.17:0,54,758	0/0:15,0:15:42.14:0,42,604	0/0:18,0:18:54.18:0,54,775	0/0:11,0:11:33.11:0,33,472	0/0:16,0:16:45.15:0,45,647	0/0:28,0:28:84.27:0,84,1173	0/0:21,0:21:60.17:0,60,841	0/0:8,0:8:24.08:0,24,345
chr10	26433371	.	T	TAC	5805.13	PASS	AB=0.982;AC=41;AF=0.788;AN=52;BaseQRankSum=-3.111;DP=366;FS=40.053;HRun=0;HaplotypeScore=96.4720;InbreedingCoeff=0.3254;MQ=51.71;MQ0=13;MQRankSum=1.166;QD=20.02;ReadPosRankSum=2.648;VQSLOD=3.0932;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:15:2.54:479,3,0	./.	0/0:22,0:3:5.34:0,5,28	0/1:25,0:7:11.74:12,0,18	1/1:18,1:21:18.07:309,18,0	1/1:17,1:17:21.07:291,21,0	1/1:8,0:8:18.06:258,18,0	0/0:27,0:27:37.59:0,38,410	1/1:6,0:6:15.05:228,15,0	0/1:16,0:16:75.15:306,0,75	0/1:14,0:14:18.59:200,0,19	1/1:7,0:7:9.03:121,9,0	0/1:8,0:8:27.56:265,0,28	1/1:11,0:11:21.07:306,21,0	./.	1/1:5,0:5:11.95:145,12,0	0/0:15,0:15:26.95:0,27,307	0/1:9,1:10:10.03:169,0,10	1/1:13,1:12:29.65:311,30,0	1/1:14,0:14:36.09:476,36,0	1/1:10,0:10:12:176,12,0	1/1:8,1:7:6.49:79,6,0	1/1:7,0:7:15.05:243,15,0	1/1:8,1:9:6.02:81,6,0	1/1:9,1:9:15.03:193,15,0	1/1:12,0:12:33.09:419,33,0	1/1:12,0:12:21.06:276,21,0	1/1:26,1:28:39.56:465,40,0
chr10	26433386	.	ACC	A	5219.31	PASS	AB=0.706;AC=42;AF=0.808;AN=52;BaseQRankSum=-0.622;DP=364;FS=38.336;HRun=3;HaplotypeScore=89.5074;InbreedingCoeff=0.2267;MQ=48.62;MQ0=31;MQRankSum=3.021;QD=16.95;ReadPosRankSum=4.133;VQSLOD=0.4197;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:13,8:19:30.65:369,0,31	./.	0/0:25,0:3:9:0,9,91	0/1:29,0:6:4.31:4,0,38	1/1:5,16:20:29.62:335,30,0	1/1:5,11:13:21:265,21,0	1/1:0,6:6:17.97:185,18,0	0/0:24,0:23:45.47:0,45,260	1/1:0,6:6:14.97:141,15,0	0/1:11,8:16:99:334,0,107	0/1:2,12:14:38.28:139,0,38	1/1:1,4:5:9.03:130,9,0	0/1:2,7:8:1.54:142,0,2	1/1:1,8:8:21.01:252,21,0	./.	1/1:1,5:5:12.01:156,12,0	0/1:9,5:13:10.76:11,0,148	1/1:7,3:10:1.14:190,1,0	1/1:14,6:17:3.93:327,4,0	1/1:1,13:14:36.02:439,36,0	1/1:1,7:7:12:134,12,0	1/1:4,2:3:5.75:89,6,0	1/1:1,6:7:14.92:110,15,0	1/1:1,4:6:5.99:68,6,0	1/1:1,9:9:15.01:176,15,0	1/1:2,11:11:33:399,33,0	1/1:0,11:11:21.03:271,21,0	1/1:3,24:27:42.01:553,42,0
chr10	26433392	.	CCACACA	C	4586	PASS	AB=0.923;AC=41;AF=0.788;AN=52;BaseQRankSum=0.838;DP=359;FS=1.973;HRun=0;HaplotypeScore=113.2991;InbreedingCoeff=0.4102;MQ=48.31;MQ0=37;MQRankSum=2.066;QD=17.11;ReadPosRankSum=4.046;VQSLOD=4.3567;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:21,1:20:11.52:299,12,0	./.	0/0:23,0:3:6.02:0,6,125	0/0:27,0:5:3.01:0,3,50	0/1:21,0:20:3.94:227,0,4	1/1:15,0:12:14.88:210,15,0	1/1:7,0:6:5.92:93,6,0	0/0:25,0:24:38.97:0,39,613	1/1:5,0:5:2.96:48,3,0	1/1:16,1:14:27.07:443,27,0	0/1:16,0:16:8.92:89,0,9	1/1:6,0:6:12.04:219,12,0	1/1:9,0:8:9:114,9,0	1/1:9,0:8:5.99:103,6,0	./.	1/1:7,0:5:2.37:89,2,0	0/0:14,0:13:10.59:0,11,195	0/1:7,3:10:42.53:123,0,43	1/1:14,6:17:33.01:552,33,0	1/1:14,0:14:23.81:297,24,0	1/1:8,0:7:9.01:116,9,0	1/1:6,0:3:5.76:94,6,0	1/1:6,1:7:5.95:50,6,0	1/1:5,0:5:3.01:47,3,0	1/1:10,0:9:12.03:167,12,0	1/1:16,0:12:27.08:421,27,0	1/1:11,0:11:15.03:212,15,0	1/1:27,0:27:35.13:572,35,0
chr10	26433415	.	CATAT	C	500.51	PASS	AB=1.000;AC=5;AF=0.104;AN=48;BaseQRankSum=-0.883;DP=279;FS=21.053;HRun=0;HaplotypeScore=93.4355;InbreedingCoeff=0.5114;MQ=45.97;MQ0=22;MQRankSum=2.082;QD=14.30;ReadPosRankSum=-1.173;VQSLOD=1.5688;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:2.88:0,3,161	0/0:2,0:1:3.01:0,3,50	./.	./.	0/0:18,0:17:11.25:0,11,151	0/0:16,0:15:27.55:0,28,423	0/0:5,0:4:0:0,0,0	1/1:11,13:22:38.10:469,38,0	0/0:4,0:4:6.02:0,6,94	0/0:14,0:12:16.56:0,17,240	0/0:13,0:13:11.62:0,12,137	0/0:8,0:8:20.82:0,21,254	0/0:7,0:6:9:0,9,121	0/0:5,0:5:3:0,3,27	./.	0/0:6,0:4:3.01:0,3,32	1/1:9,0:8:9.92:141,10,0	0/0:8,0:8:12.51:0,13,166	0/0:15,0:14:35.98:0,36,306	0/0:15,0:15:16.39:0,16,143	./.	0/0:4,0:3:3.01:0,3,50	0/0:5,0:5:9.03:0,9,135	0/1:2,0:2:0:0,0,0	0/0:7,0:7:6.83:0,7,70	0/0:14,0:11:16.10:0,16,154	0/0:8,0:8:10.76:0,11,120	0/0:14,0:14:14.34:0,14,81
chr10	26433545	.	A	AC	525.38	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.786;DP=357;FS=4.150;HRun=0;HaplotypeScore=59.9451;InbreedingCoeff=0.6946;MQ=79.09;MQ0=0;MQRankSum=-2.087;QD=30.90;ReadPosRankSum=2.113;VQSLOD=3.6157;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:63.21:0,63,881	0/0:7,0:7:21.07:0,21,294	0/0:13,0:13:39.09:0,39,502	0/0:9,0:8:12.02:0,12,135	0/0:23,0:23:66.22:0,66,911	0/0:20,0:20:60.20:0,60,838	0/0:2,0:2:6.02:0,6,84	0/0:33,0:33:99:0,99,1382	0/0:5,0:5:15.05:0,15,210	0/0:18,0:18:54.17:0,54,741	0/0:11,0:11:33.11:0,33,461	0/0:3,0:3:9.03:0,9,125	0/0:8,0:8:24.08:0,24,335	0/0:6,0:6:18.06:0,18,252	1/1:1,16:17:39.13:620,39,0	0/0:5,0:5:15.05:0,15,210	0/0:12,0:12:36.12:0,36,502	0/0:13,0:13:39.13:0,39,545	0/0:14,0:14:39.13:0,39,542	0/0:17,0:17:48.16:0,48,671	0/0:6,0:6:18.06:0,18,252	0/0:11,0:11:33.10:0,33,445	0/0:7,0:7:21.07:0,21,292	0/0:1,0:1:3.01:0,3,42	0/0:18,0:18:54.18:0,54,755	0/0:10,0:10:30.10:0,30,419	0/0:25,0:25:75.19:0,75,991	0/0:19,0:18:54.18:0,54,755
chr10	26434539	.	T	TTGTGTGTG	20495.96	PASS	AB=0.717;AC=49;AF=0.875;AN=56;BaseQRankSum=0.001;DP=799;FS=7.583;HRun=0;HaplotypeScore=259.0274;InbreedingCoeff=0.7455;MQ=55.07;MQ0=13;MQRankSum=-6.302;QD=31.39;ReadPosRankSum=-1.890;VQSLOD=3.2654;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:19,7:28:36.11:1093,36,0	1/1:4,5:9:12.04:378,12,0	0/0:53,0:28:15.05:0,15,297	0/0:64,0:36:23.93:0,24,334	1/1:16,17:39:15.05:467,15,0	1/1:7,9:23:31.46:809,31,0	1/1:20,4:28:23.06:672,23,0	0/1:20,0:33:99:138,0,114	1/1:12,14:30:45.46:1427,45,0	1/1:21,7:29:51.13:1429,51,0	1/1:25,5:33:38.17:1005,38,0	1/1:11,10:24:33.11:955,33,0	1/1:10,12:29:44.89:1330,45,0	1/1:16,6:30:51.17:1373,51,0	1/1:29,0:29:15.05:403,15,0	1/1:16,5:24:20.96:974,21,0	0/0:10,0:29:40.84:0,41,481	1/1:19,0:19:21.03:515,21,0	1/1:18,9:30:53.14:1272,53,0	1/1:10,13:26:39.13:1266,39,0	1/1:29,0:29:11.19:166,11,0	1/1:12,10:23:33.11:1116,33,0	1/1:16,10:29:15.05:435,15,0	1/1:13,13:28:2.55:67,3,0	1/1:5,10:19:23.86:706,24,0	1/1:14,5:23:30.52:796,31,0	1/1:8,11:23:33.11:1096,33,0	1/1:3,11:14:14.91:606,15,0
chr10	26434551	.	G	GTGTGTGTGTGTT	12593.08	PASS	AB=1.000;AC=32;AF=0.571;AN=56;BaseQRankSum=9.740;DP=804;FS=5.875;HRun=0;HaplotypeScore=317.9004;InbreedingCoeff=-0.1563;MQ=49.60;MQ0=19;MQRankSum=-12.189;QD=20.51;ReadPosRankSum=6.268;VQSLOD=2.4866;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:35,0:35:68.50:668,0,68	0/1:10,0:10:24.91:217,0,25	0/0:67,0:25:28.35:0,28,442	0/0:68,0:26:22.81:0,23,345	0/1:39,0:39:99:291,0,102	0/1:23,0:22:99:396,0,100	0/1:25,0:25:11.04:503,0,11	0/0:25,0:25:40.99:0,41,533	1/1:28,0:28:33.99:875,34,0	1/1:29,0:29:25.08:825,25,0	0/1:33,0:33:7.35:626,0,7	0/1:24,0:24:50.85:539,0,51	1/1:29,0:29:23.89:702,24,0	1/1:27,0:27:32.97:804,33,0	1/1:5,25:33:25.21:895,25,0	0/1:25,0:25:39.27:535,0,39	0/0:29,0:29:75.65:0,76,1217	1/1:16,0:16:1.09:315,1,0	1/1:28,0:27:28.89:825,29,0	0/1:26,0:26:4.81:707,0,5	0/1:27,0:27:63.85:64,0,100	0/1:24,0:24:28.27:675,0,28	0/1:25,0:25:4.55:257,0,5	0/1:30,0:30:37.01:105,0,37	1/1:21,0:21:3.95:376,4,0	0/1:19,0:19:29.28:420,0,29	0/1:24,0:24:6.80:643,0,7	0/1:14,0:14:27.86:330,0,28
chr10	26434561	.	GTA	G	3562.94	PASS	AB=0.955;AC=38;AF=0.679;AN=56;BaseQRankSum=-0.034;DP=718;FS=2.362;HRun=0;HaplotypeScore=221.6858;InbreedingCoeff=0.3570;MQ=46.45;MQ0=20;MQRankSum=-2.689;QD=6.99;ReadPosRankSum=-3.425;VQSLOD=3.0358;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:35,0:35:45.12:376,45,0	0/1:6,1:8:0.23:64,0,0	0/0:65,0:20:29.06:0,29,406	0/0:61,0:18:31.97:0,32,405	1/1:32,2:34:12.16:122,12,0	1/1:19,1:19:12.93:149,13,0	1/1:24,2:26:24.82:141,25,0	0/0:24,0:24:71.92:0,72,774	1/1:23,2:26:20.31:209,20,0	1/1:19,1:19:4.44:103,4,0	0/1:25,2:27:22.27:95,0,22	1/1:24,0:24:9.84:243,10,0	1/1:24,1:25:25.92:253,26,0	1/1:26,0:27:7.83:218,8,0	0/0:28,0:28:23.90:0,24,216	1/1:18,2:21:8.54:139,9,0	0/0:29,0:29:81.18:0,81,975	1/1:15,0:15:14.31:100,14,0	0/1:18,0:17:56.71:57,0,66	1/1:24,1:25:47.99:361,48,0	1/1:27,3:30:18.62:225,19,0	1/1:21,0:21:11.37:142,11,0	0/1:21,0:22:11.16:92,0,11	0/1:22,0:22:1.66:104,0,2	1/1:19,1:20:19.24:164,19,0	0/1:15,0:15:17.45:83,0,17	0/1:18,1:19:14.53:76,0,15	0/1:10,0:10:12.62:49,0,13
chr10	26434567	.	GCACT	G	2130.54	PASS	AB=0.951;AC=18;AF=0.321;AN=56;BaseQRankSum=6.128;DP=702;FS=22.918;HRun=0;HaplotypeScore=233.9146;InbreedingCoeff=-0.4628;MQ=49.99;MQ0=20;MQRankSum=-7.493;QD=5.39;ReadPosRankSum=-4.374;VQSLOD=0.5518;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:32,1:33:99:175,0,1170	0/1:8,0:8:90.87:91,0,391	0/0:66,0:22:57.15:0,57,1225	0/0:62,1:23:40.35:0,40,933	0/1:28,0:28:64.98:65,0,857	0/1:18,1:18:99:177,0,650	0/1:20,5:25:99:198,0,667	0/0:24,0:24:72.25:0,72,2047	0/1:23,0:23:99:217,0,635	0/1:16,1:16:68.68:69,0,762	0/1:23,3:26:99:149,0,691	0/1:22,1:23:99:208,0,803	0/1:26,0:26:99:223,0,889	0/1:24,3:27:99:255,0,866	0/0:28,0:28:26.64:0,27,331	0/1:22,0:22:56.51:57,0,839	0/0:33,0:33:93.32:0,93,2573	0/1:9,4:13:32.15:32,0,714	0/0:18,0:17:34.50:0,34,1206	0/1:26,0:26:99:269,0,1176	0/0:30,0:30:33.79:0,34,1251	0/1:22,0:22:4.19:4,0,1095	0/1:18,1:19:51.03:51,0,472	0/0:21,0:21:29.43:0,29,575	0/1:19,1:20:42.05:42,0,798	0/0:14,0:14:12.34:0,12,955	0/1:18,0:18:11.03:11,0,1001	0/0:8,0:8:21.07:0,21,418
chr10	26434925	.	GT	G	608.01	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.780;DP=619;FS=4.161;HRun=5;HaplotypeScore=73.0909;InbreedingCoeff=0.9566;MQ=84.76;MQ0=0;MQRankSum=-3.640;QD=24.32;ReadPosRankSum=-0.382;VQSLOD=2.5268;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:66.22:0,66,899	0/0:11,0:11:30.09:0,30,395	0/0:26,0:26:53.49:0,53,651	0/0:12,1:13:12.31:0,12,262	0/0:28,0:28:84.25:0,84,1115	0/0:16,0:16:42.14:0,42,571	0/0:14,0:14:42.14:0,42,575	0/0:34,0:34:99:0,99,1354	0/0:21,0:21:63.20:0,63,843	0/0:34,0:34:93.31:0,93,1273	0/0:30,0:30:84.22:0,84,1112	0/0:15,0:15:45.14:0,45,599	0/0:32,0:32:96.31:0,96,1297	0/0:19,0:19:57.19:0,57,780	1/1:3,22:25:63.16:703,63,0	0/0:18,0:18:48.16:0,48,656	0/0:20,0:20:57.19:0,57,780	0/0:17,0:17:48.14:0,48,639	0/0:16,0:16:48.15:0,48,640	0/0:30,0:30:81.27:0,81,1108	0/0:20,0:20:60.16:0,60,785	0/0:22,0:22:48.15:0,48,640	0/0:24,0:24:72.24:0,72,984	0/0:13,0:13:36.12:0,36,489	0/0:27,0:27:72.24:0,72,985	0/0:23,0:23:66.22:0,66,899	0/0:39,0:39:99:0,117,1581	0/0:6,0:6:15.04:0,15,193
chr10	26434951	.	C	CT	490.80	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.658;DP=595;FS=5.199;HRun=6;HaplotypeScore=60.3320;InbreedingCoeff=0.9751;MQ=71.61;MQ0=0;MQRankSum=-3.299;QD=20.45;ReadPosRankSum=-0.368;VQSLOD=2.9019;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:60.09:0,60,601	0/0:10,0:10:27.06:0,27,275	0/0:13,0:13:32.41:0,32,303	0/0:7,0:7:15.03:0,15,152	0/0:27,0:27:81.16:0,81,813	0/0:21,0:21:60.13:0,60,611	0/0:16,0:16:45.09:0,45,452	0/0:34,0:34:90.17:0,90,905	0/0:19,0:19:54.11:0,54,544	0/0:40,0:40:99:0,105,1064	0/0:28,0:28:78.16:0,78,789	0/0:16,0:16:48.11:0,48,490	0/0:29,0:29:78.17:0,78,795	0/0:17,0:17:45.10:0,45,459	1/1:3,21:24:48.11:586,48,0	0/0:16,0:16:45.10:0,45,459	0/0:20,0:20:54.12:0,54,550	0/0:13,0:13:36.05:0,36,358	0/0:21,0:21:60.12:0,60,604	0/0:34,0:34:99:0,99,1009	0/0:22,0:22:63.14:0,63,642	0/0:13,0:13:39.08:0,39,392	0/0:26,0:26:75.17:0,75,764	0/0:12,0:12:36.08:0,36,367	0/0:24,0:24:66.11:0,66,658	0/0:21,0:21:60.14:0,60,612	0/0:42,0:42:99:0,117,1186	0/0:6,0:6:18.04:0,18,184
chr10	26435779	.	A	AT	49.31	PASS	AB=0.833;AC=3;AF=0.054;AN=56;BaseQRankSum=3.392;DP=443;FS=1.925;HRun=2;HaplotypeScore=58.5505;InbreedingCoeff=0.5789;MQ=69.33;MQ0=0;MQRankSum=3.417;QD=4.48;ReadPosRankSum=-1.929;VQSLOD=-0.0446;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:51.12:0,51,614	0/0:10,0:10:27.08:0,27,335	1/1:3,3:5:9.03:122,9,0	0/1:4,1:5:23.75:24,0,72	0/0:19,0:19:57.18:0,57,706	0/0:15,0:15:42.12:0,42,508	0/0:11,0:11:33.07:0,33,383	0/0:40,0:40:99:0,120,1457	0/0:13,0:13:39.11:0,39,470	0/0:30,0:30:81.25:0,81,1004	0/0:18,0:18:48.15:0,48,595	0/0:7,0:7:21.07:0,21,260	0/0:13,0:13:39.12:0,39,483	0/0:12,0:12:33.07:0,33,383	0/0:20,0:20:60.18:0,60,731	0/0:18,0:18:51.16:0,51,632	0/0:13,0:13:33.09:0,33,397	0/0:15,0:15:45.10:0,45,538	0/0:16,0:16:48.15:0,48,595	0/0:20,0:20:57.16:0,57,692	0/0:10,0:10:30.09:0,30,372	0/0:4,0:4:12.04:0,12,149	0/0:16,0:16:48.15:0,48,595	0/0:13,0:13:39.08:0,39,466	0/0:10,0:10:30.09:0,30,372	0/0:23,0:23:66.20:0,66,809	0/0:25,0:25:72.21:0,72,880	0/0:22,0:22:66.21:0,66,818
chr10	26435921	.	AT	A	7038.86	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-4.378;DP=361;FS=15.845;HRun=8;HaplotypeScore=38.7475;InbreedingCoeff=0.9207;MQ=70.09;MQ0=0;MQRankSum=-1.554;QD=24.44;ReadPosRankSum=3.196;VQSLOD=3.6851;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,10:10:27.04:261,27,0	1/1:2,7:9:18.03:174,18,0	0/0:4,0:4:9.03:0,9,104	0/0:6,0:5:11.26:0,11,87	1/1:2,14:16:39.06:377,39,0	1/1:5,10:15:24.03:232,24,0	1/1:0,4:4:12.02:116,12,0	0/0:38,0:38:99:0,99,1194	1/1:0,10:10:30.05:290,30,0	1/1:2,19:21:57.06:544,57,0	1/1:1,17:18:45.07:434,45,0	1/1:0,7:7:15.02:145,15,0	1/1:0,13:13:36.06:348,36,0	1/1:1,9:10:24.04:232,24,0	0/0:13,0:13:36.10:0,36,426	1/1:2,12:14:36.06:348,36,0	0/0:12,0:12:36.11:0,36,435	1/1:0,7:7:21.03:203,21,0	1/1:2,15:17:45.07:435,45,0	1/1:0,19:19:54.08:522,54,0	1/1:0,9:9:24.04:232,24,0	1/1:0,6:6:18.03:174,18,0	1/1:2,8:10:21.03:203,21,0	1/1:0,1:1:3:29,3,0	1/1:2,16:18:45.07:435,45,0	1/1:4,14:18:42.06:405,42,0	1/1:1,23:24:63.10:608,63,0	1/1:0,11:12:32.09:296,32,0
chr10	26436406	.	G	GAGT	2047.22	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-8.130;DP=659;FS=0.000;HRun=0;HaplotypeScore=90.3343;InbreedingCoeff=0.9969;MQ=89.13;MQ0=0;MQRankSum=-5.097;QD=66.04;ReadPosRankSum=2.248;VQSLOD=5.1129;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:93.27:0,93,1660	0/0:9,0:9:27.09:0,27,503	0/0:27,0:27:78.27:0,78,1425	0/0:28,0:28:78.23:0,78,1378	0/0:23,0:23:69.22:0,69,1242	0/0:22,0:22:66.23:0,66,1230	0/0:22,0:22:66.23:0,66,1231	0/0:28,0:28:81.26:0,81,1451	0/0:30,0:30:90.29:0,90,1645	0/0:20,0:20:60.20:0,60,1080	0/0:14,0:14:42.14:0,42,780	0/0:31,0:31:93.32:0,93,1707	0/0:27,0:27:78.24:0,78,1390	0/0:35,0:35:99:0,105,1953	1/1:1,29:31:87.30:2142,87,0	0/0:28,0:28:84.27:0,84,1534	0/0:28,0:28:84.27:0,84,1517	0/0:11,0:11:27.09:0,27,503	0/0:17,0:17:51.16:0,51,916	0/0:25,0:25:75.26:0,75,1373	0/0:25,0:25:69.24:0,69,1285	0/0:22,0:22:63.22:0,63,1172	0/0:17,0:17:48.15:0,48,863	0/0:28,0:28:78.27:0,78,1454	0/0:16,0:16:48.16:0,48,895	0/0:32,0:32:96.32:0,96,1757	0/0:23,0:23:66.23:0,66,1228	0/0:9,0:9:27.09:0,27,503
chr10	26436962	.	AC	A	614.27	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.225;DP=585;FS=5.204;HRun=6;HaplotypeScore=58.4703;InbreedingCoeff=0.9801;MQ=70.81;MQ0=0;MQRankSum=-0.919;QD=22.75;ReadPosRankSum=-0.417;VQSLOD=2.7055;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:87.22:0,87,1095	0/0:10,0:10:27.09:0,27,355	0/0:22,0:22:45.80:0,46,589	0/0:15,0:14:26:0,26,347	0/0:31,0:31:87.23:0,87,1123	0/0:25,0:25:72.15:0,72,910	0/0:19,0:19:51.15:0,51,645	0/0:17,0:17:51.15:0,51,646	0/0:21,0:21:57.17:0,57,734	0/0:26,0:26:78.14:0,78,976	0/0:21,0:21:60.17:0,60,760	0/0:17,0:17:51.12:0,51,626	0/0:17,0:17:51.17:0,51,669	0/0:24,0:24:66.16:0,66,821	1/1:1,26:27:66.17:709,66,0	0/0:14,0:14:42.12:0,42,527	0/0:10,0:10:24.02:0,24,282	0/0:19,0:19:54.18:0,54,709	0/0:16,0:16:39.12:0,39,500	0/0:40,0:40:99:0,111,1444	0/0:23,0:23:57.16:0,57,721	0/0:29,0:29:87.26:0,87,1114	0/0:23,0:23:66.16:0,66,847	0/0:16,0:16:42.12:0,42,537	0/0:18,0:18:45.11:0,45,546	0/0:22,0:22:62.78:0,63,785	0/0:24,0:24:72.16:0,72,884	0/0:5,0:5:15.05:0,15,197
chr10	26437221	.	C	CTCTG	36357.87	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-9.502;DP=654;FS=3.921;HRun=0;HaplotypeScore=97.2836;InbreedingCoeff=0.9974;MQ=81.62;MQ0=0;MQRankSum=-9.700;QD=60.29;ReadPosRankSum=5.919;VQSLOD=6.7213;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,34:43:93.32:2433,93,0	1/1:0,9:9:27.09:712,27,0	0/0:31,0:30:60.32:0,60,1209	0/0:20,0:20:45.15:0,45,756	1/1:8,22:30:54.19:1425,54,0	1/1:1,19:21:57.20:1504,57,0	1/1:6,23:30:66.23:1741,66,0	1/1:13,18:32:72.23:1786,72,0	1/1:0,15:15:42.14:1108,42,0	1/1:11,19:31:66.21:1621,66,0	1/1:2,13:16:39.13:1029,39,0	1/1:4,18:22:51.17:1346,51,0	1/1:5,19:25:60.21:1557,60,0	1/1:2,18:22:48.16:1226,48,0	1/1:8,26:35:72.25:1901,72,0	1/1:0,29:29:81.28:2138,81,0	1/1:1,17:18:45.15:1188,45,0	1/1:2,8:11:24.08:633,24,0	1/1:7,11:19:54.16:1276,54,0	1/1:2,27:30:72.25:1899,72,0	1/1:4,22:26:55.07:1428,55,0	1/1:8,12:20:30.10:791,30,0	1/1:3,15:19:39.13:1028,39,0	1/1:3,13:17:32.48:870,32,0	1/1:2,18:20:48.16:1267,48,0	1/1:1,23:26:75.24:1873,75,0	1/1:6,21:27:72.25:1873,72,0	1/1:0,10:10:27.09:706,27,0
chr10	26437799	.	C	CT	5040.58	PASS	AB=1.000;AC=44;AF=0.786;AN=56;BaseQRankSum=9.902;DP=579;FS=0.000;HRun=8;HaplotypeScore=88.0380;InbreedingCoeff=0.5861;MQ=66.07;MQ0=2;MQRankSum=-0.210;QD=10.77;ReadPosRankSum=7.148;VQSLOD=2.8197;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:34,0:34:63.40:341,63,0	1/1:7,0:7:14.25:71,14,0	0/0:30,0:24:43.91:0,44,373	0/0:18,0:12:23.20:0,23,193	1/1:25,0:25:8.01:198,8,0	1/1:22,0:22:32.23:241,32,0	1/1:18,0:18:23.58:197,24,0	0/0:24,0:24:57.01:0,57,522	1/1:18,0:18:37.07:189,37,0	1/1:18,0:18:36.83:201,37,0	1/1:18,0:18:23.25:212,23,0	0/1:12,0:12:10.31:120,0,10	1/1:19,0:19:25.79:213,26,0	1/1:20,0:20:8.41:210,8,0	1/1:7,20:27:60.17:688,60,0	1/1:23,0:23:30.60:243,31,0	0/0:38,0:38:99:0,102,923	1/1:21,0:21:25.83:201,26,0	0/1:14,0:14:15.32:109,0,15	1/1:18,0:18:31.37:160,31,0	1/1:23,0:22:40.37:220,40,0	0/1:15,0:15:34.41:92,0,34	1/1:19,0:19:19.07:185,19,0	1/1:23,0:23:32.28:244,32,0	1/1:13,0:13:8.77:124,9,0	0/1:19,0:19:0.56:141,0,1	1/1:28,0:28:49.08:270,49,0	1/1:14,0:14:31.29:169,31,0
chr10	26437807	.	T	TC	12954.29	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-8.825;DP=578;FS=0.000;HRun=4;HaplotypeScore=60.3312;InbreedingCoeff=0.9939;MQ=61.10;MQ0=6;MQRankSum=3.935;QD=28.35;ReadPosRankSum=5.818;VQSLOD=4.0805;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,31:34:66.22:876,66,0	1/1:0,7:7:15.05:199,15,0	0/0:30,0:21:41.53:0,42,440	0/0:22,0:11:23.85:0,24,225	1/1:3,21:24:62.83:722,63,0	1/1:2,20:23:57.11:718,57,0	1/1:1,17:18:45.15:597,45,0	0/0:28,0:28:72.04:0,72,726	1/1:0,15:15:39.13:517,39,0	1/1:1,15:17:41.95:533,42,0	1/1:2,17:19:45.15:596,45,0	1/1:3,10:13:30.10:395,30,0	1/1:1,19:20:48.16:637,48,0	1/1:2,20:22:51.17:676,51,0	1/1:23,0:23:27.44:147,27,0	1/1:2,22:24:54.18:717,54,0	0/0:41,0:41:99:0,108,1159	1/1:2,17:19:45.15:597,45,0	1/1:5,9:12:30.06:378,30,0	1/1:1,15:17:32.98:438,33,0	1/1:1,18:21:42.06:504,42,0	1/1:3,11:14:30.03:376,30,0	1/1:1,15:16:42.14:557,42,0	1/1:1,24:25:54.18:717,54,0	1/1:1,13:14:30.10:398,30,0	1/1:1,17:18:42.14:556,42,0	1/1:0,24:24:51.17:677,51,0	1/1:2,12:14:33.10:426,33,0
chr10	26438935	.	TA	T	292.08	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.430;DP=564;FS=10.154;HRun=1;HaplotypeScore=96.7662;InbreedingCoeff=0.8744;MQ=70.16;MQ0=0;MQRankSum=-5.157;QD=15.37;ReadPosRankSum=2.175;VQSLOD=2.7919;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:66.19:0,66,965	0/0:12,0:12:36.11:0,36,527	0/0:16,0:16:5.79:0,6,494	0/0:8,0:7:11.78:0,12,150	0/0:33,0:33:99:0,99,1491	0/0:18,0:18:51.14:0,51,735	0/0:13,0:13:39.12:0,39,574	0/0:37,0:37:99:0,111,1622	0/0:23,0:23:69.19:0,69,987	0/0:28,0:28:81.25:0,81,1183	0/0:20,0:20:57.17:0,57,850	0/0:11,0:11:33.11:0,33,505	0/0:24,0:24:72.18:0,72,1015	0/0:15,0:15:45.15:0,45,689	1/1:4,15:19:50.32:387,50,0	0/0:14,0:14:42.14:0,42,641	0/0:22,0:22:63.19:0,63,927	0/0:32,0:32:90.18:0,90,1274	0/0:14,0:14:42.14:0,42,642	0/0:30,0:30:90.28:0,90,1335	0/0:13,0:13:39.12:0,39,575	0/0:18,0:18:54.17:0,54,805	0/0:19,0:19:54.16:0,54,784	0/0:9,0:9:27.07:0,27,391	0/0:19,0:19:57.19:0,57,872	0/0:29,0:29:87.26:0,87,1255	0/0:21,0:21:63.20:0,63,941	0/0:24,0:24:72.24:0,72,1101
chr10	26438941	.	TA	T	299.93	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.930;DP=549;FS=8.467;HRun=1;HaplotypeScore=91.8761;InbreedingCoeff=0.9672;MQ=68.82;MQ0=0;MQRankSum=-4.048;QD=16.66;ReadPosRankSum=1.978;VQSLOD=3.4380;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:66.16:0,66,878	0/0:11,0:11:33.11:0,33,471	0/0:14,0:14:42.02:0,42,521	0/0:8,0:7:11.98:0,12,109	0/0:35,0:35:99:0,105,1459	0/0:16,0:16:48.14:0,48,667	0/0:11,0:11:33.11:0,33,472	0/0:36,0:36:99:0,108,1401	0/0:19,0:19:57.16:0,57,777	0/0:27,0:27:78.25:0,78,1084	0/0:22,0:22:66.18:0,66,884	0/0:12,0:12:36.11:0,36,496	0/0:21,0:21:63.19:0,63,880	0/0:17,0:17:51.15:0,51,707	1/1:3,15:18:50.72:395,51,0	0/0:14,0:14:42.11:0,42,564	0/0:24,0:24:69.11:0,69,907	0/0:30,0:30:81.26:0,81,1149	0/0:14,0:14:42.14:0,42,601	0/0:29,0:29:87.26:0,87,1205	0/0:12,0:12:36.12:0,36,515	0/0:18,0:18:54.18:0,54,770	0/0:18,0:18:51.12:0,51,673	0/0:8,0:8:24.06:0,24,323	0/0:19,0:19:57.19:0,57,813	0/0:26,0:26:78.26:0,78,1114	0/0:23,0:23:69.17:0,69,910	0/0:24,0:24:72.20:0,72,973
chr10	26438971	.	TAATTAATTTGG	T	1129.07	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.737;DP=516;FS=0.000;HRun=0;HaplotypeScore=178.4984;InbreedingCoeff=0.8587;MQ=65.95;MQ0=0;MQRankSum=-5.798;QD=56.45;ReadPosRankSum=-0.381;VQSLOD=2.8081;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:66.23:0,66,3423	0/0:10,0:10:30.10:0,30,1575	0/0:7,0:7:10.80:0,11,120	0/0:3,0:3:6.02:0,6,123	0/0:35,0:35:99:0,102,5476	0/0:18,0:18:48.15:0,48,2335	0/0:12,0:12:30.10:0,30,1483	0/0:23,0:23:54.16:0,54,2035	0/0:18,0:18:54.15:0,54,2540	0/0:26,0:26:75.26:0,75,3987	0/0:20,0:20:54.19:0,54,2784	0/0:12,0:12:27.09:0,27,1416	0/0:22,0:22:63.22:0,63,3408	0/0:14,0:14:39.13:0,39,2072	1/1:6,14:20:36.12:1224,36,0	0/0:12,0:12:33.11:0,33,1654	0/0:14,0:14:39.13:0,39,1791	0/0:26,0:26:66.21:0,66,3287	0/0:25,0:25:63.22:0,63,2805	0/0:35,0:35:93.32:0,93,4659	0/0:11,0:11:30.10:0,30,1568	0/0:21,0:21:60.21:0,60,3002	0/0:20,0:20:51.18:0,51,2593	0/0:6,0:6:15.05:0,15,842	0/0:15,0:15:42.14:0,42,2012	0/0:31,0:31:87.29:0,87,4693	0/0:24,0:24:63.22:0,63,3361	0/0:14,0:14:36.12:0,36,1368
chr10	26439322	.	GA	G	1311.67	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.184;DP=557;FS=9.021;HRun=10;HaplotypeScore=62.8873;InbreedingCoeff=0.8564;MQ=79.98;MQ0=0;MQRankSum=-2.159;QD=16.19;ReadPosRankSum=1.785;VQSLOD=3.8383;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,121,1280	0/0:6,0:6:18.05:0,18,199	0/0:17,1:18:8.04:0,8,285	0/0:21,0:20:35.59:0,36,313	0/0:24,0:25:62.98:0,63,662	0/0:22,0:22:42.59:0,43,594	0/0:11,0:11:21.06:0,21,232	1/1:5,22:27:65.96:568,66,0	0/0:13,0:14:32.92:0,33,346	0/0:24,0:24:60.15:0,60,653	0/0:26,0:26:38.26:0,38,609	0/0:18,0:18:23.21:0,23,435	0/0:21,1:22:24.98:0,25,488	0/0:23,0:23:60.15:0,60,657	1/1:4,0:18:26.47:78,26,0	0/0:11,0:11:30.08:0,30,332	1/1:2,34:36:92.98:807,93,0	0/0:19,0:19:54.15:0,54,597	0/0:22,1:23:31.09:0,31,563	0/0:28,0:28:81.19:0,81,884	0/0:13,0:13:33.02:0,33,345	0/0:9,0:9:27.07:0,27,299	0/0:20,2:22:5.03:0,5,504	0/0:9,1:10:0.86:0,1,239	0/0:16,0:16:42.11:0,42,465	0/0:15,0:15:39.11:0,39,431	0/0:18,0:18:51.10:0,51,550	0/0:16,0:16:48.09:0,48,511
chr10	26440178	.	GT	G	776.21	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.903;DP=549;FS=4.010;HRun=9;HaplotypeScore=67.3960;InbreedingCoeff=0.9819;MQ=70.30;MQ0=0;MQRankSum=0.713;QD=20.98;ReadPosRankSum=-2.781;VQSLOD=3.2689;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:63.19:0,63,727	0/0:8,0:8:24.07:0,24,277	0/0:14,0:14:33.06:0,33,357	0/0:10,0:10:21.02:0,21,218	0/0:19,0:19:39.11:0,39,447	0/0:21,0:21:60.14:0,60,677	0/0:18,0:18:45.07:0,45,484	1/1:3,22:25:66.01:596,66,0	0/0:27,0:27:72.17:0,72,815	0/0:31,0:31:73.76:0,74,826	0/0:22,0:22:60.14:0,60,677	0/0:15,0:15:39.07:0,39,429	0/0:24,1:27:41.66:0,42,700	0/0:20,0:20:51.11:0,51,573	0/0:25,1:26:44.64:0,45,723	0/0:22,1:23:38.71:0,39,684	1/1:1,11:12:33.02:302,33,0	0/0:9,0:9:24.07:0,24,277	0/0:20,1:21:26.68:0,27,552	0/0:24,0:25:62.94:0,63,677	0/0:15,1:16:14.62:0,15,408	0/0:14,0:14:36.06:0,36,396	0/0:21,0:21:57.17:0,57,657	0/0:10,0:10:18.05:0,18,208	0/0:18,0:18:48.11:0,48,540	0/0:24,0:24:69.21:0,69,796	0/0:27,0:27:69.16:0,69,781	0/0:16,0:16:42.08:0,42,460
chr10	26448465	.	AT	A	1899.53	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.548;DP=545;FS=1.065;HRun=5;HaplotypeScore=51.3770;InbreedingCoeff=0.9665;MQ=76.73;MQ0=0;MQRankSum=-2.082;QD=27.93;ReadPosRankSum=1.613;VQSLOD=3.7688;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:69.23:0,69,941	0/0:10,0:10:30.10:0,30,410	0/0:12,0:12:24.03:0,24,275	0/0:11,0:10:8.77:0,9,73	0/0:29,0:29:87.27:0,87,1171	0/0:28,0:28:78.25:0,78,1052	0/0:6,0:6:18.06:0,18,246	1/1:0,20:20:60.17:681,60,0	0/0:21,0:21:60.18:0,60,790	0/0:27,0:27:81.27:0,81,1099	0/0:20,0:20:54.17:0,54,720	0/0:24,0:24:69.23:0,69,941	0/0:21,0:21:63.21:0,63,857	0/0:19,0:19:54.18:0,54,735	1/1:1,26:27:66.19:749,66,0	0/0:20,0:20:51.15:0,51,679	1/1:1,20:21:54.15:613,54,0	0/0:7,0:7:18.06:0,18,246	0/0:17,0:17:51.17:0,51,698	0/0:23,0:23:63.21:0,63,862	0/0:20,0:20:60.20:0,60,821	0/0:14,0:14:39.13:0,39,534	0/0:22,0:22:63.16:0,63,797	0/0:12,0:12:30.10:0,30,410	0/0:28,0:28:81.25:0,81,1090	0/0:22,0:22:66.21:0,66,887	0/0:34,0:33:99:0,102,1377	0/0:6,0:6:15.05:0,15,205
chr10	26448654	.	AG	A	18049.82	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-2.256;DP=565;FS=0.797;HRun=2;HaplotypeScore=57.7284;InbreedingCoeff=0.9777;MQ=79.89;MQ0=0;MQRankSum=-6.727;QD=33.74;ReadPosRankSum=4.213;VQSLOD=4.9453;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,14:15:39.13:501,39,0	1/1:0,10:10:30.10:389,30,0	0/0:21,0:21:54.14:0,54,691	0/0:9,0:8:14.71:0,15,216	1/1:1,49:50:99:1731,141,0	1/1:0,24:24:57.19:739,57,0	1/1:0,9:9:27.09:350,27,0	1/1:1,19:20:59.83:709,60,0	1/1:0,18:18:45.15:583,45,0	1/1:0,34:34:99:1284,102,0	1/1:1,24:25:63.20:817,63,0	1/1:1,22:23:57.19:739,57,0	1/1:0,23:23:54.18:700,54,0	1/1:0,21:21:48.16:623,48,0	1/1:0,18:18:36.12:467,36,0	1/1:0,10:10:30.10:388,30,0	1/1:0,19:19:45.15:583,45,0	1/1:1,12:13:33.11:422,33,0	1/1:1,17:18:51.03:611,51,0	1/1:1,30:31:87.23:1108,87,0	1/1:0,7:7:15.05:194,15,0	1/1:0,18:18:54.02:641,54,0	1/1:1,21:22:54.17:700,54,0	1/1:0,8:8:18.06:233,18,0	1/1:0,28:28:78.25:1011,78,0	1/1:0,21:21:63.17:776,63,0	1/1:0,33:33:87.28:1128,87,0	1/1:0,17:17:48.16:622,48,0
chr10	26449386	.	C	CA	2284.25	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-3.305;DP=691;FS=3.625;HRun=7;HaplotypeScore=108.2517;InbreedingCoeff=0.9931;MQ=82.35;MQ0=1;MQRankSum=-1.581;QD=25.96;ReadPosRankSum=-1.737;VQSLOD=2.6652;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:81.08:0,81,772	0/0:6,0:6:15.02:0,15,145	0/0:19,0:19:41.54:0,42,378	0/0:23,0:23:49.40:0,49,480	0/0:32,0:32:87.12:0,87,834	0/0:27,0:27:69.09:0,69,660	0/0:32,0:32:93.15:0,93,897	1/1:7,27:34:81.25:977,81,0	0/0:29,0:29:78.12:0,78,752	0/0:33,0:33:96.14:0,96,921	0/0:21,0:21:57.07:0,57,544	0/0:22,0:22:60.06:0,60,568	0/0:27,0:27:72.11:0,72,695	0/0:29,0:29:78.12:0,78,752	1/1:5,21:26:51.16:616,51,0	0/0:19,0:19:54.07:0,54,515	1/1:1,27:27:69.21:834,69,0	0/0:14,0:14:33.04:0,33,318	0/0:17,0:17:42.06:0,42,402	0/0:38,0:38:99:0,108,1042	0/0:20,0:20:24.11:0,24,514	0/0:30,0:30:72.10:0,72,695	0/0:23,0:23:63.10:0,63,608	0/0:18,0:18:51.08:0,51,492	0/0:26,0:26:72.11:0,72,695	0/0:24,0:24:63.09:0,63,608	0/0:32,0:32:90.14:0,90,869	0/0:10,0:10:27.04:0,27,261
chr10	26451440	.	T	TACACACACACACACAC	6528.01	PASS	AC=42;AF=0.875;AN=48;BaseQRankSum=-3.860;DP=570;FS=2.708;HRun=0;HaplotypeScore=198.5521;InbreedingCoeff=0.4234;MQ=39.30;MQ0=38;MQRankSum=-4.559;QD=15.51;ReadPosRankSum=-4.220;VQSLOD=2.3545;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:23:6.01:233,6,0	1/1:3,0:2:3.01:84,3,0	./.	./.	1/1:25,0:22:2.74:12,3,0	1/1:27,0:27:19.85:493,20,0	1/1:34,0:30:6.40:81,6,0	1/1:28,0:28:29.71:269,30,0	1/1:11,0:10:12.04:757,12,0	1/1:27,0:23:38.77:969,39,0	1/1:22,0:21:3:25,3,0	./.	1/1:14,0:13:12.04:629,12,0	1/1:27,0:26:10.14:212,10,0	0/0:26,0:26:32.47:0,32,1043	1/1:20,0:18:9.35:61,9,0	1/1:16,0:15:11.04:65,11,0	1/1:8,0:6:2.98:21,3,0	1/1:17,0:15:22.94:482,23,0	1/1:18,0:15:3:25,3,0	0/0:18,0:12:3.01:0,3,92	1/1:20,0:19:6.87:50,7,0	0/0:21,0:17:0:0,0,0	1/1:27,0:24:8.61:101,9,0	./.	1/1:31,0:25:31.31:1431,31,0	1/1:17,0:16:11.90:468,12,0	1/1:3,0:2:3.01:62,3,0
chr10	26451726	.	TGTTTGTTTGTTTG	T	2715.33	PASS	AB=0.571;AC=5;AF=0.089;AN=56;BaseQRankSum=6.645;DP=623;FS=0.000;HRun=0;HaplotypeScore=213.8644;InbreedingCoeff=0.7820;MQ=60.56;MQ0=2;MQRankSum=-5.599;QD=43.80;ReadPosRankSum=-0.399;VQSLOD=3.0860;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:39.66:0,40,2070	0/0:9,0:9:24.08:0,24,1389	0/0:25,0:21:36.80:0,37,924	0/0:24,0:18:30.10:0,30,860	0/0:24,0:23:69.24:0,69,3667	0/0:31,0:29:78.18:0,78,3554	0/0:17,0:17:38.91:0,39,1577	1/1:21,0:20:45.15:1080,45,0	0/0:17,0:17:48.16:0,48,2831	0/0:21,0:21:48.16:0,48,2259	0/0:19,0:19:51.16:0,51,2714	0/0:27,0:27:75.26:0,75,4067	0/0:29,0:29:78.25:0,78,4027	0/0:21,0:21:48.16:0,48,2838	1/1:3,22:25:39.13:1431,39,0	0/0:27,0:27:72.23:0,72,3444	0/1:4,12:16:19.72:334,0,20	0/0:27,0:26:72.12:0,72,2864	0/0:20,0:20:50.89:0,51,2003	0/0:22,0:22:56.39:0,56,2911	0/0:23,0:23:66.23:0,66,3782	0/0:21,0:21:60.21:0,60,3344	0/0:27,0:27:66.20:0,66,3246	0/0:23,0:24:39.23:0,39,2953	0/0:23,0:21:60.19:0,60,3245	0/0:23,0:23:57.18:0,57,2814	0/0:23,0:23:54.19:0,54,2716	0/0:17,0:17:36.12:0,36,1940
chr10	26451738	.	TG	T	937.76	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.750;DP=632;FS=0.000;HRun=2;HaplotypeScore=76.4024;InbreedingCoeff=0.9793;MQ=58.52;MQ0=2;MQRankSum=-5.610;QD=15.89;ReadPosRankSum=-1.416;VQSLOD=3.0324;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:27.60:0,28,576	0/0:9,0:9:24.08:0,24,356	0/0:25,0:22:55.53:0,56,664	0/0:20,0:14:36.88:0,37,485	0/0:30,0:29:86.20:0,86,1168	0/0:31,0:29:84.19:0,84,1204	0/0:17,0:17:32.76:0,33,593	1/1:0,24:23:69.14:844,69,0	0/0:17,0:17:51.17:0,51,762	0/0:20,0:20:54.15:0,54,776	0/0:20,0:20:60.19:0,60,875	0/0:29,0:29:87.28:0,87,1278	0/0:30,0:30:84.27:0,84,1232	0/0:20,0:20:57.18:0,57,831	1/1:22,0:22:34.25:163,34,0	0/0:26,0:26:78.25:0,78,1139	1/1:12,1:13:10.88:70,11,0	0/0:26,0:25:66.47:0,66,939	0/0:21,0:21:62.92:0,63,854	0/0:24,0:24:68.43:0,68,971	0/0:25,0:25:75.24:0,75,1100	0/0:24,0:24:69.22:0,69,1006	0/0:32,0:32:92.50:0,92,1313	0/0:23,1:24:15.38:0,15,801	0/0:26,0:24:72.22:0,72,1033	0/0:26,0:26:78.24:0,78,1117	0/0:20,0:20:60.19:0,60,875	0/0:14,0:14:42.14:0,42,619
chr10	26452684	.	GT	G	2150.33	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=10.696;DP=566;FS=4.529;HRun=4;HaplotypeScore=58.1950;InbreedingCoeff=0.9817;MQ=74.80;MQ0=0;MQRankSum=-8.809;QD=30.29;ReadPosRankSum=-3.192;VQSLOD=2.3438;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:72.20:0,72,986	0/0:10,0:10:27.09:0,27,378	0/0:17,0:17:42.92:0,43,564	0/0:9,0:9:24.08:0,24,323	0/0:34,0:34:99:0,99,1370	0/0:16,0:17:51:0,51,686	0/0:13,0:13:33.11:0,33,462	1/1:6,33:39:99:1211,102,0	0/0:23,0:23:66.22:0,66,924	0/0:34,0:34:99:0,102,1414	0/0:30,0:30:84.28:0,84,1176	0/0:23,0:23:69.21:0,69,934	0/0:21,0:21:63.21:0,63,881	0/0:18,0:18:54.17:0,54,739	1/1:1,26:27:78.24:935,78,0	0/0:18,0:18:54.18:0,54,756	1/1:0,5:5:12.04:144,12,0	0/0:15,0:15:42.14:0,42,586	0/0:26,0:26:72.24:0,72,1007	0/0:30,0:30:90.29:0,90,1244	0/0:14,0:14:39.13:0,39,546	0/0:20,0:20:60.19:0,60,824	0/0:12,0:12:36.10:0,36,473	0/0:5,0:5:15.05:0,15,210	0/0:21,0:21:60.20:0,60,840	0/0:28,0:28:78.25:0,78,1077	0/0:21,0:21:63.21:0,63,882	0/0:10,0:10:27.08:0,27,378
chr10	26452707	.	A	AT	2252.88	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=3.867;DP=559;FS=9.156;HRun=2;HaplotypeScore=55.8370;InbreedingCoeff=0.9920;MQ=69.70;MQ0=0;MQRankSum=-6.994;QD=37.55;ReadPosRankSum=-3.223;VQSLOD=2.4166;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:81.25:0,81,1003	0/0:8,0:8:24.04:0,24,281	0/0:21,0:20:54.15:0,54,649	0/0:11,0:11:33.06:0,33,388	0/0:34,0:34:99:0,99,1226	0/0:19,0:19:51.16:0,51,632	0/0:9,0:9:24.05:0,24,283	1/1:2,27:29:81.27:1152,81,0	0/0:14,0:14:39.12:0,39,483	0/0:34,0:34:99:0,102,1264	0/0:29,0:29:87.26:0,87,1065	0/0:22,0:22:66.19:0,66,805	0/0:26,0:26:72.21:0,72,878	0/0:18,0:18:51.16:0,51,632	1/1:1,23:24:69.23:983,69,0	0/0:21,0:21:60.19:0,60,744	1/1:1,6:7:18.06:259,18,0	0/0:13,0:13:36.04:0,36,412	0/0:21,0:21:63.20:0,63,780	0/0:32,0:32:93.28:0,93,1137	0/0:11,0:11:33.10:0,33,409	0/0:22,0:22:66.21:0,66,818	0/0:11,0:11:30.09:0,30,372	0/0:7,0:7:18.06:0,18,222	0/0:27,0:27:75.23:0,75,930	0/0:27,0:27:78.25:0,78,967	0/0:22,0:22:57.16:0,57,693	0/0:11,0:11:26.98:0,27,334
chr10	26453559	.	G	GT	7369.11	PASS	AB=0.667;AC=45;AF=0.804;AN=56;BaseQRankSum=-10.208;DP=421;FS=1.919;HRun=11;HaplotypeScore=45.5328;InbreedingCoeff=0.6792;MQ=69.13;MQ0=0;MQRankSum=0.202;QD=20.47;ReadPosRankSum=0.455;VQSLOD=5.6703;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,9:12:1.35:186,1,0	1/1:2,6:8:12.02:122,12,0	0/0:6,0:6:11.83:0,12,80	0/0:9,0:7:1.80:0,2,5	1/1:5,26:33:31.94:630,32,0	1/1:4,14:18:36.07:365,36,0	1/1:1,10:11:27.05:274,27,0	0/0:7,0:20:14.29:0,14,52	1/1:1,9:10:3.82:220,4,0	1/1:3,14:17:42.08:426,42,0	1/1:8,20:29:68.94:671,69,0	1/1:1,9:11:32.90:317,33,0	0/1:5,5:10:24.98:131,0,25	1/1:1,11:12:36.06:360,36,0	0/0:0,0:12:22.41:0,22,66	1/1:4,15:19:39.08:396,39,0	0/0:1,0:14:26.48:0,26,78	1/1:5,11:15:9.79:270,10,0	1/1:5,11:16:12.82:306,13,0	1/1:4,18:22:31.72:485,32,0	1/1:1,6:7:15.03:152,15,0	1/1:3,4:7:9.02:91,9,0	1/1:3,8:11:18.04:183,18,0	1/1:0,9:9:27.05:274,27,0	1/1:3,19:22:36.07:365,36,0	1/1:8,14:22:42.55:427,43,0	1/1:5,22:27:49.28:541,49,0	1/1:3,7:11:0.65:174,1,0
chr10	26453798	.	G	GA	3050.31	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-12.886;DP=470;FS=3.974;HRun=6;HaplotypeScore=42.4659;InbreedingCoeff=0.9601;MQ=81.65;MQ0=0;MQRankSum=-0.153;QD=32.45;ReadPosRankSum=-2.267;VQSLOD=2.9973;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:27.06:0,27,275	0/0:5,0:5:15.03:0,15,153	0/0:15,0:15:36.08:0,36,366	0/0:13,0:13:8.91:0,9,250	0/0:21,0:21:51.11:0,51,520	0/0:21,0:21:57.13:0,57,582	0/0:10,0:10:24.05:0,24,245	1/1:4,40:44:99:1494,120,0	0/0:20,0:20:57.13:0,57,581	0/0:19,0:19:57.12:0,57,576	0/0:19,0:19:57.08:0,57,564	0/0:14,0:14:42.10:0,42,428	0/0:11,0:11:33.04:0,33,322	0/0:17,0:17:42.09:0,42,429	1/1:1,32:33:87.28:1095,87,0	0/0:16,0:16:48.11:0,48,489	1/1:1,16:17:48.15:604,48,0	0/0:16,0:16:39.08:0,39,397	0/0:25,0:25:69.15:0,69,704	0/0:24,0:24:66.15:0,66,673	0/0:7,0:7:21.02:0,21,206	0/0:9,0:9:27.06:0,27,275	0/0:11,0:11:33.08:0,33,337	0/0:4,0:4:12.03:0,12,122	0/0:19,0:19:51.11:0,51,520	0/0:18,0:18:54.10:0,54,543	0/0:20,0:20:54.12:0,54,551	0/0:12,0:12:36.08:0,36,367
chr10	26454788	.	T	TA	2097.72	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-1.673;DP=587;FS=5.566;HRun=8;HaplotypeScore=53.2954;InbreedingCoeff=0.9416;MQ=70.29;MQ0=0;MQRankSum=-1.142;QD=26.89;ReadPosRankSum=-0.892;VQSLOD=4.0435;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:45.02:0,45,411	0/0:12,0:12:33.02:0,33,302	0/0:8,0:8:11.96:0,12,102	0/0:11,0:10:11.62:0,12,85	0/0:39,0:39:99:0,111,1016	0/0:32,0:32:90.01:0,90,814	0/0:14,0:14:36.02:0,36,329	1/1:6,20:26:60.16:682,60,0	0/0:20,0:20:54.03:0,54,494	0/0:29,0:29:75.04:0,75,686	0/0:22,0:22:66.02:0,66,599	0/0:20,0:20:60.03:0,60,549	0/0:16,0:16:42:0,42,378	0/0:21,0:21:60.02:0,60,546	1/1:1,28:29:84.25:969,84,0	0/0:26,0:26:63.03:0,63,577	1/1:4,19:23:51.15:589,51,0	0/0:14,0:14:32.99:0,33,295	0/0:25,0:25:69:0,69,621	0/0:31,0:31:84.04:0,84,768	0/0:12,0:12:30.01:0,30,275	0/0:24,0:24:57.02:0,57,522	0/0:27,0:27:69.04:0,69,631	0/0:14,0:14:36.02:0,36,328	0/0:24,0:24:63.01:0,63,571	0/0:16,0:16:45.02:0,45,412	0/0:33,0:33:86.98:0,87,787	0/0:2,0:2:6:0,6,55
chr10	26454966	.	TAA	T	18712.25	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=5.424;DP=534;FS=0.828;HRun=2;HaplotypeScore=71.1049;InbreedingCoeff=0.9910;MQ=93.31;MQ0=0;MQRankSum=-6.651;QD=44.13;ReadPosRankSum=7.975;VQSLOD=4.2974;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,15:15:39.13:636,39,0	1/1:0,6:6:15.05:245,15,0	0/0:20,0:20:39.74:0,40,985	0/0:27,0:27:75.26:0,75,1454	1/1:0,35:35:99:1615,99,0	1/1:0,22:22:57.19:930,57,0	1/1:2,9:11:15.51:469,16,0	0/0:28,0:28:81.26:0,81,1548	1/1:0,20:20:51.17:826,51,0	1/1:0,18:18:54.18:880,54,0	1/1:0,32:32:84.29:1369,84,0	1/1:0,17:17:42.14:685,42,0	1/1:0,20:20:57.19:930,57,0	1/1:0,19:19:51.17:832,51,0	0/0:20,0:21:62.70:0,63,1228	1/1:0,20:20:48.16:783,48,0	0/0:14,0:14:42.14:0,42,853	1/1:0,7:7:21.07:342,21,0	1/1:0,20:20:60.19:955,60,0	1/1:0,20:20:60.20:977,60,0	1/1:0,15:15:39.13:636,39,0	1/1:0,14:14:39.13:636,39,0	1/1:0,35:35:96.33:1566,96,0	1/1:0,12:12:33.11:538,33,0	1/1:0,30:30:81.28:1321,81,0	1/1:0,14:14:39.12:612,39,0	1/1:0,14:14:36.12:587,36,0	1/1:0,8:8:21.07:342,21,0
chr10	26455209	.	CA	C	2181.24	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=11.462;DP=669;FS=2.108;HRun=5;HaplotypeScore=67.6526;InbreedingCoeff=0.9993;MQ=86.22;MQ0=0;MQRankSum=-3.542;QD=27.27;ReadPosRankSum=0.873;VQSLOD=3.6971;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:39.11:0,39,515	0/0:13,0:13:36.12:0,36,491	0/0:29,0:29:60.26:0,60,848	0/0:14,0:14:33.07:0,33,424	0/0:40,0:40:99:0,110,1538	0/0:35,0:35:96.32:0,96,1312	0/0:15,0:15:45.15:0,45,616	1/1:4,26:30:78.21:868,78,0	0/0:28,0:28:84.28:0,84,1149	0/0:32,0:32:93.30:0,93,1259	0/0:24,0:24:63.19:0,63,830	0/0:32,0:32:93.31:0,93,1270	0/0:37,0:37:99:0,111,1503	0/0:33,0:33:99:0,99,1336	1/1:4,33:37:96.27:1089,96,0	0/0:19,0:19:57.19:0,57,780	1/1:0,13:13:33.09:367,33,0	0/0:9,0:9:27.09:0,27,369	0/0:15,0:15:45.15:0,45,616	0/0:27,0:27:81.27:0,81,1106	0/0:17,0:17:51.17:0,51,697	0/0:16,0:16:42.14:0,42,574	0/0:20,0:20:57.19:0,57,772	0/0:18,0:18:54.18:0,54,739	0/0:31,0:31:87.25:0,87,1144	0/0:22,0:22:60.20:0,60,810	0/0:36,0:36:93.28:0,93,1252	0/0:14,0:14:42.14:0,42,574
chr10	26456253	.	TC	T	1479.25	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=3.807;DP=610;FS=1.132;HRun=5;HaplotypeScore=71.2627;InbreedingCoeff=0.9699;MQ=80.75;MQ0=0;MQRankSum=-1.048;QD=26.90;ReadPosRankSum=-1.691;VQSLOD=2.7978;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:36.09:0,36,455	0/0:11,0:11:30.10:0,30,405	0/0:23,0:23:47.26:0,47,579	0/0:16,0:15:34.40:0,34,384	0/0:33,0:32:87.22:0,87,1083	0/0:29,0:29:84.28:0,84,1136	0/0:16,0:16:48.15:0,48,633	1/1:5,29:34:90.06:956,90,0	0/0:18,0:18:54.15:0,54,698	0/0:25,0:25:69.22:0,69,907	0/0:31,0:31:90.27:0,90,1175	0/0:14,0:14:42.12:0,42,540	0/0:21,0:21:57.16:0,57,737	0/0:21,0:21:60.19:0,60,795	0/0:22,0:22:66.19:0,66,861	0/0:29,0:29:78.19:0,78,965	1/1:0,21:21:57.16:645,57,0	0/0:13,0:13:39.08:0,39,491	0/0:16,0:16:42.12:0,42,539	0/0:31,0:31:87.24:0,87,1116	0/0:13,0:13:36.12:0,36,486	0/0:27,0:27:72.20:0,72,917	0/0:25,0:25:72.22:0,72,944	0/0:17,0:17:48.13:0,48,617	0/0:23,0:23:69.21:0,69,903	0/0:26,0:26:75.25:0,75,1015	0/0:37,0:37:99:0,105,1356	0/0:3,0:3:8.96:0,9,82
chr10	26458533	.	TG	T	1248.36	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-8.857;DP=503;FS=5.174;HRun=9;HaplotypeScore=90.4751;InbreedingCoeff=0.8617;MQ=79.94;MQ0=0;MQRankSum=0.813;QD=17.83;ReadPosRankSum=1.268;VQSLOD=3.8424;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:2,0:8:5.68:0,6,29	0/0:2,0:9:13.82:0,14,72	0/0:21,0:21:21.79:0,22,234	0/0:23,0:21:22.83:0,23,293	0/0:7,0:18:34.47:0,34,209	0/0:5,0:18:28.60:0,29,155	0/0:1,0:13:28.73:0,29,163	1/1:6,21:27:59.72:519,60,0	0/0:3,0:19:36.93:0,37,187	0/0:4,0:16:34.38:0,34,191	0/0:5,0:26:59.94:0,60,327	0/0:6,0:10:11.52:0,12,70	0/0:4,0:29:59.86:0,60,324	0/0:6,0:17:25.68:0,26,141	1/1:3,28:31:31.42:542,31,0	0/0:4,0:20:34.36:0,34,188	1/1:0,12:12:36.02:329,36,0	0/0:4,0:9:11.62:0,12,69	0/0:5,0:16:34.77:0,35,203	0/0:11,0:28:49.08:0,49,283	0/0:4,0:10:5.68:0,6,29	0/0:4,0:11:11.36:0,11,58	0/0:11,0:19:11.48:0,11,62	0/0:4,0:12:11.23:0,11,58	0/0:1,0:23:42.55:0,43,228	0/0:14,0:25:40.34:0,40,232	0/0:7,0:26:36.93:0,37,188	0/0:1,0:7:20.03:0,20,110
chr10	26459317	.	G	GA	333.80	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.661;DP=648;FS=0.948;HRun=8;HaplotypeScore=68.1187;InbreedingCoeff=0.9678;MQ=79.68;MQ0=0;MQRankSum=-2.439;QD=19.64;ReadPosRankSum=0.492;VQSLOD=3.5739;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:65.23:0,65,577	0/0:6,0:6:15.01:0,15,137	0/0:14,0:15:33.60:0,34,259	0/0:23,0:23:36.99:0,37,390	0/0:27,0:27:50.46:0,50,629	0/0:32,0:32:71.99:0,72,653	0/0:20,0:20:56.98:0,57,509	0/0:41,0:41:86.99:0,87,786	0/0:19,0:19:47.99:0,48,428	0/0:26,0:26:69.02:0,69,629	0/0:31,0:31:83.99:0,84,757	0/0:25,0:25:53.97:0,54,486	0/0:33,0:33:86.99:0,87,782	0/0:18,0:18:48.01:0,48,434	1/1:2,14:17:38.95:429,39,0	0/0:27,0:27:72.03:0,72,655	0/0:22,0:21:60.03:0,60,549	0/0:14,0:14:28.46:0,28,259	0/0:22,0:21:51.01:0,51,462	0/0:34,1:35:61.40:0,61,810	0/0:26,0:26:63.01:0,63,573	0/0:19,0:19:54.01:0,54,491	0/0:28,0:28:75.01:0,75,681	0/0:7,0:7:15:0,15,137	0/0:21,0:21:51.01:0,51,467	0/0:28,0:28:78.04:0,78,713	0/0:29,0:29:75.01:0,75,682	0/0:11,0:11:33.02:0,33,302
chr10	26459363	.	GTTAACA	G	620.78	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.094;DP=610;FS=1.071;HRun=0;HaplotypeScore=125.1163;InbreedingCoeff=0.9822;MQ=84.05;MQ0=0;MQRankSum=-5.764;QD=41.39;ReadPosRankSum=0.001;VQSLOD=3.1977;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:75.26:0,75,2600	0/0:6,0:6:18.06:0,18,660	0/0:18,0:18:54.17:0,54,1560	0/0:23,0:23:63.20:0,63,1877	0/0:26,0:26:78.27:0,78,2694	0/0:23,0:23:66.23:0,66,2193	0/0:20,0:20:57.18:0,57,1802	0/0:27,0:27:81.28:0,81,2854	0/0:22,0:22:60.21:0,60,2047	0/0:25,0:25:72.25:0,72,2598	0/0:32,0:32:93.32:0,93,3270	0/0:20,0:20:60.21:0,60,2190	0/0:34,0:34:99:0,99,3504	0/0:18,0:18:54.18:0,54,1804	1/1:1,14:15:39.13:716,39,0	0/0:21,0:21:63.17:0,63,2130	0/0:17,0:16:51.18:0,51,1868	0/0:6,0:6:18.06:0,18,659	0/0:19,0:18:54.17:0,54,1786	0/0:34,0:34:99:0,102,3543	0/0:20,0:20:60.19:0,60,1981	0/0:24,0:24:69.24:0,69,2432	0/0:25,0:25:69.24:0,69,2420	0/0:10,0:10:24.08:0,24,845	0/0:18,0:18:51.18:0,51,1855	0/0:30,0:30:87.30:0,87,3079	0/0:35,0:35:99:0,99,3532	0/0:17,0:17:51.18:0,51,1800
chr10	26459371	.	A	AG	311.02	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.632;DP=597;FS=3.578;HRun=1;HaplotypeScore=64.1011;InbreedingCoeff=0.9803;MQ=81.89;MQ0=0;MQRankSum=-6.436;QD=19.44;ReadPosRankSum=-0.708;VQSLOD=3.6257;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:69.22:0,69,895	0/0:6,0:6:18.06:0,18,234	0/0:17,0:17:45.14:0,45,568	0/0:20,0:20:54.15:0,54,677	0/0:28,0:28:78.25:0,78,1030	0/0:22,0:22:54.16:0,54,687	0/0:18,0:18:48.12:0,48,593	0/0:29,0:29:81.23:0,81,1034	0/0:23,0:23:54.18:0,54,700	0/0:24,0:24:69.20:0,69,880	0/0:30,0:30:85.52:0,86,1094	0/0:20,0:20:60.20:0,60,779	0/0:33,0:33:93.30:0,93,1206	0/0:18,0:18:52.05:0,52,664	1/1:2,14:16:45.01:406,45,0	0/0:20,0:20:57.19:0,57,740	0/0:18,0:17:54.18:0,54,701	0/0:6,0:6:18.06:0,18,234	0/0:17,0:16:48.16:0,48,621	0/0:32,0:32:93.30:0,93,1213	0/0:18,0:18:47.02:0,47,604	0/0:20,0:20:60.18:0,60,766	0/0:24,0:24:66.17:0,66,842	0/0:10,0:10:21.07:0,21,273	0/0:19,0:19:48.16:0,48,623	0/0:29,0:29:84.22:0,84,1060	0/0:39,0:39:96.13:0,96,1232	0/0:14,0:14:42.12:0,42,529
chr10	26459453	.	T	TTTTA	25025.55	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-1.798;DP=540;FS=0.492;HRun=0;HaplotypeScore=135.2046;InbreedingCoeff=0.9356;MQ=66.08;MQ0=2;MQRankSum=-6.574;QD=59.58;ReadPosRankSum=5.330;VQSLOD=6.5389;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,14:21:47.99:1045,48,0	1/1:1,4:5:15.05:372,15,0	0/0:35,0:22:4.07:0,4,583	0/0:36,0:25:41.16:0,41,720	1/1:4,25:31:86.99:1878,87,0	1/1:2,13:16:36.12:871,36,0	1/1:5,19:24:48.15:1146,48,0	0/0:28,0:28:72.13:0,72,1100	1/1:5,14:19:39.13:965,39,0	1/1:2,16:18:54.16:1337,54,0	1/1:4,18:22:57.11:1373,57,0	1/1:3,8:12:36.12:850,36,0	1/1:5,20:25:63.20:1601,63,0	1/1:8,17:25:66.11:1503,66,0	1/1:7,10:17:42.01:919,42,0	1/1:4,15:19:57.18:1342,57,0	0/0:20,0:20:36.08:0,36,608	1/1:4,8:12:29.99:676,30,0	1/1:2,8:13:36.07:704,36,0	1/1:4,19:24:57.13:1451,57,0	1/1:4,5:9:21.02:391,21,0	1/1:4,7:11:33:681,33,0	1/1:0,14:14:38.80:967,39,0	1/1:3,11:14:27.09:700,27,0	1/1:4,18:22:57.20:1414,57,0	1/1:0,13:13:36.12:954,36,0	1/1:1,27:29:63.22:1644,63,0	1/1:0,4:4:9.03:240,9,0
chr10	26459468	.	T	TTGTG	9019.98	PASS	AB=0.847;AC=50;AF=0.893;AN=56;BaseQRankSum=-0.492;DP=585;FS=4.172;HRun=0;HaplotypeScore=211.2825;InbreedingCoeff=0.4200;MQ=54.38;MQ0=10;MQRankSum=0.042;QD=17.83;ReadPosRankSum=0.742;VQSLOD=4.6318;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,7:23:17:193,17,0	1/1:4,5:8:12.04:288,12,0	0/0:36,0:17:12.04:0,12,168	0/0:43,0:23:11.90:0,12,175	1/1:21,8:30:9.03:196,9,0	0/1:10,3:13:45.21:60,0,45	1/1:17,5:24:29.84:577,30,0	1/1:24,0:24:16.82:178,17,0	0/1:13,1:15:25.07:232,0,25	1/1:17,8:27:47.76:836,48,0	1/1:15,9:25:12.04:252,12,0	1/1:9,6:17:26.30:468,26,0	1/1:19,7:28:41.83:748,42,0	1/1:12,11:25:26.88:588,27,0	1/1:12,0:18:14.08:215,14,0	1/1:11,12:25:44.61:908,45,0	1/1:14,0:27:17.50:250,18,0	1/1:7,5:14:15:307,15,0	1/1:11,2:13:9.03:193,9,0	1/1:18,4:24:11.77:226,12,0	1/1:4,4:14:14.52:233,15,0	1/1:4,5:10:6.02:144,6,0	1/1:10,6:17:6.02:114,6,0	1/1:9,4:13:9.03:186,9,0	1/1:15,5:23:11.78:224,12,0	1/1:9,6:15:30.10:677,30,0	1/1:18,8:27:6.12:689,6,0	1/1:4,0:4:3.01:40,3,0
chr10	26460455	.	CAG	C	17632.61	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=10.063;DP=542;FS=4.501;HRun=0;HaplotypeScore=66.6354;InbreedingCoeff=0.9834;MQ=78.69;MQ0=9;MQRankSum=-4.505;QD=39.45;ReadPosRankSum=6.539;VQSLOD=6.9270;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:0,28:26:69.23:1056,69,0	1/1:0,9:9:27.09:413,27,0	0/0:19,0:18:50.66:0,51,899	0/0:13,0:13:38.72:0,39,690	1/1:0,40:39:96.20:1391,96,0	1/1:0,20:20:54.18:827,54,0	1/1:0,11:11:33.11:505,33,0	0/0:29,0:29:84.24:0,84,1531	1/1:0,16:16:42.14:643,42,0	1/1:0,25:25:75.25:1149,75,0	1/1:0,19:18:51.09:728,51,0	1/1:0,16:16:42.14:643,42,0	1/1:1,14:15:33.11:505,33,0	1/1:0,24:24:69.22:1035,69,0	0/0:16,0:16:48.16:0,48,927	1/1:0,14:13:33.11:505,33,0	0/0:18,0:18:54.19:0,54,1033	1/1:0,9:9:21.07:321,21,0	1/1:1,18:18:48.15:715,48,0	1/1:0,30:29:78.26:1194,78,0	1/1:0,23:23:54.18:827,54,0	1/1:1,15:16:39.09:560,39,0	1/1:0,26:25:68.97:1056,69,0	1/1:0,7:7:18.06:276,18,0	1/1:0,26:25:69.23:1056,69,0	1/1:0,17:17:51.16:761,51,0	1/1:2,32:33:87.30:1331,87,0	1/1:0,3:3:9.03:138,9,0
chr10	26461558	.	AT	A	12922.66	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-5.875;DP=602;FS=23.401;HRun=9;HaplotypeScore=61.5627;InbreedingCoeff=0.9803;MQ=81.55;MQ0=0;MQRankSum=-6.366;QD=22.67;ReadPosRankSum=4.181;VQSLOD=3.5658;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,25:27:69.03:632,69,0	1/1:2,5:7:15:137,15,0	0/0:17,0:17:20.43:0,20,268	0/0:15,0:15:16:0,16,202	1/1:6,21:29:67.10:589,67,0	1/1:1,28:29:72.04:659,72,0	1/1:1,20:21:57.03:522,57,0	1/1:3,21:24:63.01:571,63,0	1/1:0,17:17:48.03:439,48,0	1/1:2,22:24:66.03:604,66,0	1/1:2,21:23:54.02:494,54,0	1/1:3,12:15:33.01:301,33,0	1/1:2,27:29:65.93:604,66,0	1/1:1,20:21:51.03:467,51,0	1/1:0,14:14:42.02:384,42,0	1/1:0,22:22:60.03:549,60,0	1/1:2,23:25:63.03:577,63,0	1/1:4,8:12:20.99:192,21,0	1/1:5,12:17:39:353,39,0	1/1:3,33:36:90.02:824,90,0	1/1:1,16:17:45.02:412,45,0	1/1:2,25:27:66.02:604,66,0	1/1:1,21:22:63.03:577,63,0	1/1:4,13:17:36.01:330,36,0	1/1:2,26:28:63.03:577,63,0	1/1:3,24:27:71.99:647,72,0	1/1:4,22:26:60.03:549,60,0	1/1:0,14:14:36.02:330,36,0
chr10	26462416	.	CATG	C	2508.66	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=10.194;DP=689;FS=0.517;HRun=0;HaplotypeScore=92.4393;InbreedingCoeff=0.9913;MQ=81.02;MQ0=0;MQRankSum=-3.237;QD=40.46;ReadPosRankSum=-2.874;VQSLOD=3.8567;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:87.26:0,87,1913	0/0:9,0:9:27.09:0,27,597	0/0:17,0:17:44.33:0,44,1074	0/0:18,0:18:51.17:0,51,1104	0/0:36,0:36:99:0,108,2352	0/0:19,0:19:51.16:0,51,1126	0/0:24,0:24:69.24:0,69,1568	1/1:5,33:38:99:1610,99,0	0/0:18,0:18:54.19:0,54,1242	0/0:30,0:30:90.30:0,90,1993	0/0:14,0:14:42.13:0,42,920	0/0:30,0:30:90.30:0,90,2030	0/0:34,0:34:99:0,99,2169	0/0:27,0:27:75.26:0,75,1704	0/0:41,0:41:99:0,117,2558	0/0:23,0:23:69.21:0,69,1499	1/1:0,24:24:60.21:1021,60,0	0/0:5,0:5:15.01:0,15,296	0/0:32,0:32:93.31:0,93,2098	0/0:33,0:33:96.30:0,96,2124	0/0:25,0:25:75.26:0,75,1704	0/0:29,0:29:81.28:0,81,1845	0/0:16,0:16:45.14:0,45,991	0/0:17,0:17:51.18:0,51,1172	0/0:28,0:28:84.27:0,84,1866	0/0:26,0:26:72.24:0,72,1619	0/0:30,0:29:90.24:0,90,1833	0/0:15,0:15:45.15:0,45,1036
chr10	26463498	.	GA	G	1288.98	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=6.673;DP=566;FS=15.412;HRun=8;HaplotypeScore=62.2251;InbreedingCoeff=0.8343;MQ=76.61;MQ0=0;MQRankSum=-2.498;QD=17.90;ReadPosRankSum=-4.407;VQSLOD=1.3510;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:5:15.05:0,15,181	0/0:5,0:5:12.04:0,12,145	0/1:13,0:13:2.06:2,0,240	0/0:12,0:12:26.95:0,27,303	0/0:31,0:31:90.22:0,90,1059	0/0:27,0:27:72.20:0,72,857	0/0:11,0:11:27.08:0,27,326	1/1:7,26:33:81.12:779,81,0	0/0:12,0:12:36.11:0,36,435	0/0:23,0:23:60.18:0,60,725	0/0:26,0:26:63.19:0,63,761	0/0:29,0:30:81.11:0,81,957	0/0:25,0:25:66.15:0,66,769	0/0:26,0:26:69.19:0,69,819	0/0:23,0:23:69.21:0,69,834	0/0:27,0:27:69.18:0,69,808	1/1:2,24:26:67.87:631,68,0	0/0:21,0:21:60.12:0,60,691	0/0:17,0:17:51.16:0,51,616	0/0:29,0:29:81.24:0,81,969	0/0:15,0:15:30.05:0,30,346	0/0:10,0:10:24.07:0,24,290	0/0:17,0:17:45.14:0,45,542	0/0:17,0:17:51.16:0,51,616	0/0:22,0:22:60.18:0,60,725	0/0:17,0:17:51.16:0,51,616	0/0:32,0:32:96.29:0,96,1159	0/0:14,0:14:32.44:0,32,349
chr10	26464975	.	AGAGGGTT	A	3762.59	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=6.473;DP=589;FS=1.864;HRun=0;HaplotypeScore=146.6304;InbreedingCoeff=0.9963;MQ=75.63;MQ0=0;MQRankSum=-10.570;QD=59.72;ReadPosRankSum=-0.591;VQSLOD=3.2165;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:69.22:0,69,2679	0/0:9,0:9:27.09:0,27,1091	0/0:18,0:18:51.18:0,51,2009	0/0:10,0:10:30.03:0,30,1086	0/0:28,0:28:84.29:0,84,3306	0/0:22,0:22:60.19:0,60,2181	0/0:19,0:19:51.18:0,51,2047	1/1:5,22:27:66.18:1628,66,0	0/0:14,0:14:42.14:0,42,1690	0/0:26,0:26:78.27:0,78,2944	0/0:31,0:31:87.30:0,87,3397	0/0:15,0:15:45.15:0,45,1811	0/0:26,0:26:75.26:0,75,3026	0/0:25,0:25:75.26:0,75,2995	1/1:1,17:18:51.18:1344,51,0	0/0:24,0:24:72.25:0,72,2725	1/1:5,13:18:30.10:790,30,0	0/0:7,0:7:21.07:0,21,812	0/0:19,0:19:57.20:0,57,2234	0/0:41,0:41:99:0,120,4728	0/0:8,0:8:24.08:0,24,934	0/0:13,0:13:39.13:0,39,1568	0/0:21,0:21:63.22:0,63,2537	0/0:30,0:30:84.27:0,84,3246	0/0:27,0:27:81.27:0,81,3130	0/0:29,0:29:84.28:0,84,3255	0/0:32,0:32:96.31:0,96,3675	0/0:8,0:8:24.06:0,24,796
chr10	26465349	.	AT	A	14443.44	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=7.765;DP=628;FS=0.398;HRun=7;HaplotypeScore=64.1458;InbreedingCoeff=0.9978;MQ=80.18;MQ0=0;MQRankSum=-3.647;QD=27.62;ReadPosRankSum=4.732;VQSLOD=5.2745;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,14:16:33.07:337,33,0	1/1:0,12:12:30.07:306,30,0	0/0:18,0:18:45.14:0,45,542	0/0:17,0:17:50.64:0,51,586	1/1:2,21:23:60.13:612,60,0	1/1:1,33:34:99:1010,99,0	1/1:1,16:17:39.09:398,39,0	0/0:27,0:27:78.25:0,78,982	1/1:0,17:17:48.11:490,48,0	1/1:0,24:24:72.15:729,72,0	1/1:0,30:30:87.07:862,87,0	1/1:0,32:32:87.20:888,87,0	1/1:1,34:35:96.22:979,96,0	1/1:0,30:30:87.20:888,87,0	0/0:24,0:24:69.22:0,69,868	1/1:0,26:26:75.17:765,75,0	0/0:19,0:19:54.17:0,54,679	1/1:2,12:14:36.03:355,36,0	1/1:3,18:21:54.12:551,54,0	1/1:3,41:44:82.46:1143,82,0	1/1:1,7:8:18.04:184,18,0	1/1:1,17:18:48.11:490,48,0	1/1:0,19:19:48.08:490,48,0	1/1:0,12:12:36.08:367,36,0	1/1:1,22:23:57.13:582,57,0	1/1:0,25:25:75.17:765,75,0	1/1:0,31:31:90.20:918,90,0	1/1:0,12:12:33.08:337,33,0
chr10	26468248	.	AAGG	A	16439.74	PASS	AC=44;AF=0.815;AN=54;BaseQRankSum=10.696;DP=513;FS=1.388;HRun=0;HaplotypeScore=84.1584;InbreedingCoeff=0.9980;MQ=73.66;MQ0=0;MQRankSum=-4.695;QD=40.19;ReadPosRankSum=4.898;VQSLOD=5.7887;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,30:31:69.24:1109,69,0	1/1:1,10:11:24.08:386,24,0	0/0:12,0:12:33.10:0,33,693	0/0:12,0:12:27.04:0,27,519	1/1:0,17:17:45.12:677,45,0	1/1:1,19:20:51.17:820,51,0	1/1:1,14:15:42.14:665,42,0	0/0:30,0:29:84.26:0,84,1681	1/1:2,17:19:42.14:675,42,0	1/1:1,23:24:69.24:1106,69,0	1/1:2,22:24:60.20:954,60,0	1/1:0,21:21:60.20:964,60,0	1/1:0,21:21:51.17:811,51,0	1/1:1,15:16:39.13:627,39,0	0/0:25,0:25:72.22:0,72,1490	1/1:3,17:20:45.15:723,45,0	0/0:25,0:25:72.25:0,72,1521	1/1:0,11:11:30.10:482,30,0	1/1:5,9:14:27.09:426,27,0	1/1:1,29:30:81.27:1273,81,0	1/1:1,9:10:24.08:386,24,0	1/1:0,21:21:54.14:840,54,0	1/1:1,19:20:48.16:771,48,0	1/1:1,11:12:33.11:530,33,0	1/1:3,9:12:27.09:434,27,0	1/1:0,19:18:54.18:864,54,0	1/1:1,20:21:57.19:916,57,0	./.
chr10	26468375	.	T	TC	14183.32	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=9.540;DP=529;FS=2.033;HRun=0;HaplotypeScore=91.5912;InbreedingCoeff=0.9875;MQ=68.90;MQ0=1;MQRankSum=-1.915;QD=32.31;ReadPosRankSum=6.243;VQSLOD=4.5028;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,21:23:57.06:707,57,0	1/1:0,13:13:32.97:439,33,0	0/0:8,0:8:21.05:0,21,260	0/0:11,0:12:10.47:0,10,271	1/1:1,32:33:88.53:1078,89,0	1/1:1,20:21:51.17:675,51,0	1/1:0,15:15:33.11:439,33,0	0/0:34,0:34:93.25:0,93,1179	1/1:0,17:17:38.98:494,39,0	1/1:0,23:23:67.07:849,67,0	1/1:0,13:12:30.10:389,30,0	1/1:2,20:22:54.18:719,54,0	1/1:1,20:21:54.18:711,54,0	1/1:0,18:18:42.14:564,42,0	0/0:19,0:19:57.18:0,57,768	1/1:0,19:19:42.14:549,42,0	0/0:16,0:16:48.11:0,48,616	1/1:3,9:12:32.90:393,33,0	1/1:0,14:14:42.14:573,42,0	1/1:1,27:28:69.26:889,69,0	1/1:0,12:12:24.08:324,24,0	1/1:0,17:17:43.22:538,43,0	1/1:0,10:10:27.09:354,27,0	1/1:1,16:17:27.42:459,27,0	1/1:2,33:35:99:1349,102,0	1/1:1,23:24:67.08:874,67,0	1/1:1,15:16:29.76:395,30,0	1/1:4,12:16:33.05:423,33,0
chr10	26468450	.	AGTGTGTGTGTGTGTGT	A	3524.91	PASS	AB=0.999;AC=27;AF=0.482;AN=56;BaseQRankSum=-11.857;DP=702;FS=1.981;HRun=0;HaplotypeScore=295.6313;InbreedingCoeff=-0.6552;MQ=51.47;MQ0=24;MQRankSum=2.789;QD=5.91;ReadPosRankSum=6.665;VQSLOD=1.8839;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:29:99:145,0,1208	0/1:11,0:11:47.43:47,0,324	0/0:43,0:16:8.92:0,9,70	0/0:38,0:12:11.99:0,12,103	0/1:26,0:26:99:157,0,431	0/1:13,0:12:81.85:82,0,362	0/1:24,0:23:99:222,0,161	1/1:15,12:26:37.69:352,38,0	0/1:24,0:23:99:147,0,613	0/1:17,0:15:55.02:55,0,128	0/1:16,0:16:39.45:39,0,937	0/1:24,0:24:99:110,0,775	0/1:29,0:30:99:228,0,1130	0/1:31,0:31:99:193,0,705	0/0:25,0:25:29.34:0,29,745	0/1:26,0:26:15.51:16,0,1638	1/1:35,1:36:23.42:428,23,0	0/1:19,0:19:99:132,0,523	0/1:13,0:11:61.79:62,0,98	0/1:26,0:26:99:258,0,601	0/1:49,0:48:99:152,0,2016	0/1:16,0:15:78.87:139,0,79	0/1:19,0:19:48.84:49,0,358	0/1:38,0:37:99:118,0,2933	0/1:28,0:29:96.03:96,0,1136	0/1:21,0:20:99:215,0,805	0/1:18,0:19:50.22:50,0,1075	0/1:8,0:6:31.95:32,0,210
chr10	26468468	.	T	TGC	5567.43	PASS	AB=0.983;AC=29;AF=0.518;AN=56;BaseQRankSum=-5.887;DP=687;FS=67.444;HRun=0;HaplotypeScore=147.2938;InbreedingCoeff=-0.4700;MQ=49.44;MQ0=27;MQRankSum=3.921;QD=9.07;ReadPosRankSum=6.342;VQSLOD=1.8665;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:37,0:33:25.32:328,0,25	0/1:10,0:10:28.40:54,0,28	0/0:26,0:5:8.92:0,9,70	0/0:23,0:4:11.99:0,12,103	1/1:20,0:20:28.40:207,28,0	0/1:15,0:14:2.29:109,0,2	1/1:23,0:22:4.18:212,4,0	0/1:22,0:21:71.41:173,0,71	0/1:22,0:21:7.30:218,0,7	0/1:14,0:13:64.34:64,0,132	0/1:18,1:19:40.20:197,0,40	0/1:21,1:22:3.24:267,0,3	0/1:28,1:29:57.05:326,0,57	0/1:32,0:31:12.86:216,0,13	0/0:23,0:23:46.63:0,47,360	1/1:22,1:23:46.66:497,47,0	0/1:45,0:45:13.40:99,0,13	0/1:22,1:23:75.63:244,0,76	0/1:12,0:12:60.76:107,0,61	0/1:32,0:32:31.19:278,0,31	0/1:53,1:52:78.78:460,0,79	0/1:15,0:14:12.26:134,0,12	1/1:24,0:20:4.77:120,5,0	0/1:40,3:42:75.56:545,0,76	0/1:29,1:30:75.15:259,0,75	0/1:18,0:17:35.11:234,0,35	0/1:20,0:20:68.66:153,0,69	0/1:8,0:6:5.85:67,0,6
chr10	26468482	.	TGTGC	T	4686.41	PASS	AB=1.000;AC=32;AF=0.593;AN=54;BaseQRankSum=-9.551;DP=606;FS=0.000;HRun=0;HaplotypeScore=150.0600;InbreedingCoeff=-0.5089;MQ=50.16;MQ0=23;MQRankSum=2.701;QD=8.15;ReadPosRankSum=-10.887;VQSLOD=0.8147;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:38,0:34:80.58:259,0,81	0/1:10,0:10:8.56:97,0,9	./.	0/1:13,0:2:1.46:1,0,4	0/1:14,0:14:30.45:118,0,30	0/1:13,0:13:14.14:121,0,14	1/1:20,0:19:28.53:218,29,0	0/1:25,0:25:15:196,0,15	0/1:18,0:17:72.42:97,0,72	1/1:10,0:10:6.34:152,6,0	0/1:17,0:17:47.31:47,0,131	0/1:19,0:18:28.64:167,0,29	0/1:25,0:25:98.82:203,0,99	0/1:30,0:29:72.70:133,0,73	1/1:18,4:22:48.77:406,49,0	0/1:24,0:24:99:146,0,137	0/1:38,0:38:18.14:70,0,18	1/1:22,0:21:9.38:290,9,0	1/1:13,0:12:14.76:158,15,0	0/1:25,0:25:17.41:298,0,17	0/1:52,0:50:76.85:391,0,77	1/1:13,0:12:20.96:172,21,0	0/0:19,0:15:5.36:0,5,57	0/1:47,0:46:99:361,0,254	0/1:30,0:30:99:225,0,101	0/1:16,0:15:72.56:169,0,73	0/1:16,0:16:17.82:180,0,18	0/1:5,0:2:10.40:10,0,19
chr10	26468484	.	TGC	T	6022.45	PASS	AB=1.000;AC=50;AF=0.926;AN=54;BaseQRankSum=-5.042;DP=591;FS=5.223;HRun=0;HaplotypeScore=130.1601;InbreedingCoeff=-0.0833;MQ=50.42;MQ0=21;MQRankSum=3.752;QD=10.33;ReadPosRankSum=-3.858;VQSLOD=3.6561;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:37,0:34:42.06:350,42,0	1/1:10,0:10:11.03:103,11,0	./.	0/1:11,0:3:1:28,0,1	1/1:13,0:13:12.56:134,13,0	1/1:13,0:13:5.04:150,5,0	1/1:20,0:19:34.11:267,34,0	0/1:25,0:25:14.53:199,0,15	1/1:17,0:16:12.22:124,12,0	1/1:9,0:9:24.33:200,24,0	0/1:16,0:16:18.84:81,0,19	1/1:20,0:19:31.76:247,32,0	1/1:25,0:25:27.63:309,28,0	1/1:29,0:28:11.59:202,12,0	1/1:20,3:23:50.92:434,51,0	1/1:25,0:25:23.05:256,23,0	0/1:38,0:38:21.24:44,0,21	1/1:22,0:21:51.43:363,51,0	1/1:12,0:11:15.92:183,16,0	1/1:25,0:25:47.80:380,48,0	1/1:48,1:48:63.33:537,63,0	1/1:12,0:11:20.96:172,21,0	1/1:19,0:15:3.26:13,3,0	1/1:47,0:46:41.60:492,42,0	1/1:29,0:29:22.40:291,22,0	1/1:15,0:14:3.31:190,3,0	1/1:16,0:16:31.11:257,31,0	1/1:5,0:2:2.92:18,3,0
chr10	26471445	.	CT	C	10999.69	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=2.700;DP=541;FS=3.400;HRun=7;HaplotypeScore=84.1510;InbreedingCoeff=0.9933;MQ=77.60;MQ0=0;MQRankSum=-2.496;QD=25.06;ReadPosRankSum=4.032;VQSLOD=5.3845;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,19:19:45.10:458,45,0	1/1:0,7:7:21.05:214,21,0	0/0:20,0:18:20.84:0,21,412	0/0:13,0:12:23.28:0,23,211	1/1:0,20:20:57.12:578,57,0	1/1:1,26:27:69.16:704,69,0	1/1:3,14:17:42.09:428,42,0	0/0:24,0:24:60.18:0,60,744	1/1:2,15:18:39.09:398,39,0	1/1:4,22:26:63.10:628,63,0	1/1:1,17:18:48.06:476,48,0	1/1:3,24:27:63.14:643,63,0	1/1:1,28:29:66.15:673,66,0	1/1:0,18:18:42.10:428,42,0	0/0:31,0:31:90.29:0,90,1132	1/1:0,18:18:51.12:520,51,0	0/0:14,0:14:33.11:0,33,415	1/1:2,7:9:15.03:153,15,0	1/1:0,17:17:48.03:462,48,0	1/1:1,14:16:42.01:404,42,0	1/1:1,24:25:63.14:643,63,0	1/1:2,12:14:27.05:274,27,0	1/1:1,16:18:39.09:398,39,0	1/1:2,12:14:36.08:367,36,0	1/1:1,22:23:57.13:581,57,0	1/1:1,12:13:36.02:347,36,0	1/1:2,32:34:84.19:856,84,0	1/1:0,12:12:36.08:366,36,0
chr10	26472297	.	TA	T	1898.24	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.155;DP=516;FS=0.486;HRun=7;HaplotypeScore=80.1314;InbreedingCoeff=0.9209;MQ=73.36;MQ0=1;MQRankSum=0.029;QD=23.44;ReadPosRankSum=-2.586;VQSLOD=2.6408;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:57.17:0,57,704	0/0:7,0:7:21.07:0,21,264	0/0:11,0:7:6.42:0,6,132	0/0:21,0:17:10.76:0,11,247	0/0:33,0:33:99:0,99,1245	0/0:22,0:22:60.18:0,60,741	0/0:6,0:6:15.05:0,15,188	1/1:7,22:29:66.13:665,66,0	0/0:12,0:12:30.09:0,30,365	0/0:17,0:17:45.14:0,45,566	0/0:23,0:23:66.21:0,66,829	0/0:20,0:20:54.17:0,54,678	0/0:20,0:20:57.17:0,57,701	0/0:20,0:20:51.16:0,51,641	1/1:4,23:27:66.15:672,66,0	0/0:20,0:20:57.18:0,57,717	1/1:1,24:25:69.16:704,69,0	0/0:16,0:16:42.13:0,42,527	0/0:15,0:15:39.12:0,39,491	0/0:25,0:25:72.22:0,72,894	0/0:4,0:4:9.03:0,9,113	0/0:7,0:7:21.07:0,21,264	0/0:21,0:21:60.19:0,60,755	0/0:17,0:17:51.16:0,51,642	0/0:25,0:25:69.22:0,69,867	0/0:23,0:23:60.18:0,60,744	0/0:21,0:21:63.20:0,63,790	0/0:10,0:10:15.05:0,15,188
chr10	26475550	.	AGTGTGTGTGTGT	A	1954.14	PASS	AB=0.790;AC=42;AF=0.808;AN=52;BaseQRankSum=1.603;DP=503;FS=9.524;HRun=0;HaplotypeScore=175.6182;InbreedingCoeff=0.0414;MQ=61.64;MQ0=18;MQRankSum=-2.844;QD=4.60;ReadPosRankSum=-0.109;VQSLOD=2.2159;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:13,9:21:1.68:41,2,0	0/1:6,1:8:11.06:14,0,11	./.	./.	1/1:14,6:20:4.78:25,5,0	0/0:12,0:12:8.88:0,9,63	0/1:13,0:18:10.04:36,0,10	1/1:27,0:25:11.35:79,11,0	0/1:19,4:24:14.66:23,0,15	0/1:13,3:16:11.94:136,0,12	1/1:8,6:14:5.98:122,6,0	1/1:10,4:13:2.97:20,3,0	0/1:10,6:16:10.49:175,0,10	1/1:15,10:25:8.86:138,9,0	0/0:19,0:19:21.07:0,21,830	1/1:9,6:14:15.39:266,15,0	1/1:20,0:20:2.97:20,3,0	1/1:11,0:11:9:190,9,0	1/1:11,0:12:2.97:83,3,0	1/1:12,0:12:5.92:39,6,0	1/1:24,0:23:9.01:117,9,0	1/1:12,7:19:5.49:39,5,0	1/1:13,6:19:5.75:65,6,0	1/1:13,6:19:5.93:40,6,0	1/1:17,8:25:8.17:141,8,0	1/1:16,3:19:6.02:143,6,0	0/1:15,6:21:25.10:94,0,25	1/1:2,0:1:3.01:49,3,0
chr10	26476320	.	A	AT	17114.52	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-7.029;DP=618;FS=13.047;HRun=7;HaplotypeScore=54.4432;InbreedingCoeff=0.9858;MQ=77.43;MQ0=0;MQRankSum=-7.791;QD=29.26;ReadPosRankSum=4.923;VQSLOD=4.2146;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,30:30:78.24:942,78,0	1/1:1,11:12:30.09:362,30,0	0/0:20,0:19:18.68:0,19,319	0/0:13,0:12:22.83:0,23,202	1/1:6,25:31:49.22:861,49,0	1/1:3,23:26:60.18:725,60,0	1/1:3,14:17:33.10:399,33,0	1/1:3,29:32:87.25:1035,87,0	1/1:5,19:24:51.16:616,51,0	1/1:2,28:30:87.27:1049,87,0	1/1:3,13:16:39.12:471,39,0	1/1:3,21:24:57.17:688,57,0	1/1:1,37:38:90.28:1087,90,0	1/1:2,21:23:51.16:616,51,0	1/1:1,23:24:51.16:616,51,0	1/1:1,22:23:54.17:653,54,0	1/1:1,17:18:42.13:507,42,0	1/1:0,19:19:42.13:507,42,0	1/1:3,14:17:42.13:507,42,0	1/1:2,20:22:57.17:688,57,0	1/1:0,12:12:27.08:326,27,0	1/1:1,23:24:63.19:757,63,0	1/1:0,18:18:45.14:544,45,0	1/1:2,15:17:39.12:471,39,0	1/1:0,24:24:60.18:725,60,0	1/1:6,26:34:84.26:1007,84,0	1/1:2,22:23:66.03:772,66,0	1/1:1,5:6:15.05:181,15,0
chr10	26476809	.	CA	C	9062.33	PASS	AB=0.704;AC=51;AF=0.911;AN=56;BaseQRankSum=4.019;DP=523;FS=0.813;HRun=11;HaplotypeScore=54.2180;InbreedingCoeff=0.3368;MQ=74.64;MQ0=0;MQRankSum=0.697;QD=18.23;ReadPosRankSum=1.782;VQSLOD=5.8057;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,14:18:27.07:288,27,0	1/1:2,9:11:23.92:191,24,0	0/1:10,2:14:41.73:42,0,74	0/1:5,2:6:9.33:13,0,9	1/1:4,20:25:26.97:417,27,0	1/1:3,23:26:65.92:542,66,0	1/1:1,20:23:58.01:455,58,0	1/1:1,32:34:91.74:730,92,0	1/1:4,16:20:44.94:369,45,0	1/1:1,23:25:67.93:545,68,0	1/1:1,12:13:32.95:271,33,0	1/1:5,11:16:31.78:251,32,0	1/1:0,16:16:44.95:369,45,0	1/1:6,23:29:65.90:542,66,0	0/0:26,0:26:45.10:0,45,472	1/1:3,15:18:38.95:320,39,0	1/1:3,10:13:26.95:222,27,0	0/1:2,7:9:5.79:153,0,6	1/1:4,10:14:3.87:226,4,0	1/1:5,15:21:52.89:413,53,0	1/1:5,17:22:38.93:320,39,0	1/1:0,2:2:5.99:49,6,0	1/1:1,14:15:38.95:320,39,0	1/1:2,20:22:50.94:419,51,0	1/1:2,20:22:44.95:369,45,0	1/1:4,21:25:62.89:511,63,0	1/1:1,22:23:62.92:517,63,0	1/1:1,11:12:23.97:197,24,0
chr10	26477318	.	CACTT	C	10507.11	PASS	AB=0.686;AC=37;AF=0.740;AN=50;BaseQRankSum=7.551;DP=479;FS=15.909;HRun=0;HaplotypeScore=75.5346;InbreedingCoeff=0.4043;MQ=35.52;MQ0=61;MQRankSum=-0.875;QD=27.29;ReadPosRankSum=4.028;VQSLOD=3.1770;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:11,13:18:58.73:315,0,59	1/1:0,8:8:18.06:336,18,0	./.	./.	1/1:1,24:23:30.10:559,30,0	1/1:0,26:25:48.16:895,48,0	0/1:5,6:9:61.70:262,0,62	0/0:33,0:27:72.20:0,72,1859	0/1:4,13:15:50.13:262,0,50	1/1:0,20:20:57.20:1063,57,0	1/1:1,21:20:30.10:559,30,0	1/1:0,18:17:26.99:503,27,0	1/1:2,19:20:33.11:616,33,0	1/1:3,15:17:36.12:671,36,0	0/0:9,0:8:12.04:0,12,319	1/1:1,25:25:51.07:951,51,0	0/0:21,0:13:18.06:0,18,479	1/1:6,7:6:12.04:224,12,0	0/1:10,3:7:99:150,0,222	1/1:1,19:19:33.11:615,33,0	0/1:17,8:17:71.10:103,0,71	1/1:0,8:8:21.07:391,21,0	1/1:2,10:12:6.02:111,6,0	0/0:9,8:11:3.01:0,3,80	1/1:1,16:18:33.11:615,33,0	1/1:3,10:13:27.06:469,27,0	1/1:1,25:25:45.15:839,45,0	./.
chr10	26484118	.	TCA	T	551.67	PASS	AB=0.892;AC=29;AF=0.604;AN=48;BaseQRankSum=0.834;DP=580;FS=2.418;HRun=0;HaplotypeScore=74.5898;InbreedingCoeff=0.0903;MQ=57.44;MQ0=8;MQRankSum=0.211;QD=1.56;ReadPosRankSum=-0.915;VQSLOD=1.5152;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:31:3.01:0,3,40	0/0:11,0:11:18.01:0,18,218	./.	./.	./.	0/0:19,0:18:0.47:0,0,1	1/1:26,4:29:3.01:32,3,0	0/0:22,0:24:2.19:0,2,7	1/1:20,0:25:2.84:14,3,0	1/1:19,0:19:2.96:32,3,0	./.	0/1:14,3:17:14.92:55,0,15	1/1:15,4:19:5.74:64,6,0	1/1:18,5:23:2.76:32,3,0	0/1:9,1:23:17.03:17,0,140	0/1:26,2:28:17:17,0,159	1/1:21,0:27:2.71:14,3,0	1/1:11,3:13:5.99:54,6,0	1/1:8,1:9:3.01:32,3,0	1/1:16,0:16:3:31,3,0	0/0:23,0:22:2.98:0,3,21	1/1:20,0:20:2.97:23,3,0	1/1:10,0:10:3:32,3,0	0/1:32,4:37:5.53:163,0,6	0/0:18,0:18:2.98:0,3,22	0/0:16,0:16:0:0,0,0	0/1:19,4:23:17.05:55,0,17	1/1:9,0:10:2.84:14,3,0
chr10	26487729	.	C	CT	1351.80	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-9.872;DP=617;FS=8.295;HRun=7;HaplotypeScore=60.2498;InbreedingCoeff=0.9870;MQ=82.42;MQ0=0;MQRankSum=-2.892;QD=25.03;ReadPosRankSum=-3.088;VQSLOD=2.6194;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:17:54.09:0,54,521	0/0:13,0:13:36.06:0,36,348	0/0:23,0:23:54.05:0,54,510	0/0:12,0:12:17.74:0,18,191	0/0:48,0:48:99:0,135,1298	0/0:26,0:26:69.11:0,69,666	0/0:14,0:14:33.05:0,33,319	1/1:5,29:34:81.23:966,81,0	0/0:20,0:20:57.05:0,57,537	0/0:28,0:28:75.12:0,75,724	0/0:19,0:19:51.08:0,51,493	0/0:20,0:20:54.08:0,54,521	0/0:27,0:27:75.12:0,75,724	0/0:25,0:25:66.10:0,66,637	0/0:2,0:24:40.74:0,41,120	0/0:25,0:25:66.10:0,66,637	1/1:4,16:20:42.13:507,42,0	0/0:8,0:8:18.02:0,18,174	0/0:15,0:15:39.06:0,39,377	0/0:38,0:38:99:0,111,1066	0/0:14,0:14:39.06:0,39,377	0/0:19,0:19:48.08:0,48,464	0/0:22,0:22:60.09:0,60,579	0/0:15,0:15:42.05:0,42,399	0/0:22,0:22:66.11:0,66,637	0/0:24,0:24:69.10:0,69,663	0/0:32,0:32:87.11:0,87,833	0/0:12,0:12:18.02:0,18,173
chr10	26487970	.	A	ATT	806.30	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.906;DP=565;FS=1.891;HRun=8;HaplotypeScore=67.0415;InbreedingCoeff=0.9359;MQ=72.59;MQ0=0;MQRankSum=-1.577;QD=36.65;ReadPosRankSum=-0.514;VQSLOD=3.4678;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:45.10:0,45,502	0/0:13,0:13:36.10:0,36,401	0/0:7,0:7:11.98:0,12,132	0/0:13,0:14:25.30:0,25,229	0/0:37,0:37:99:0,102,1127	0/0:25,0:25:69.16:0,69,759	0/0:18,0:18:48.13:0,48,535	0/0:33,0:33:90.21:0,90,989	0/0:14,0:14:42.11:0,42,468	0/0:34,0:34:96.26:0,96,1070	0/0:20,0:20:54.13:0,54,594	0/0:15,0:15:42.11:0,42,468	0/0:25,0:25:72.16:0,72,783	0/0:20,0:20:48.05:0,48,516	1/1:1,21:21:57.19:901,57,0	0/0:20,0:20:51.12:0,51,559	0/0:19,0:19:51.11:0,51,557	0/0:10,0:10:21.18:0,21,263	0/0:21,0:20:51.11:0,51,560	0/0:37,0:37:99:0,99,1098	0/0:6,0:6:15.04:0,15,167	0/0:17,0:17:51.14:0,51,568	0/0:19,0:19:54.12:0,54,591	0/0:18,0:18:48.08:0,48,522	0/0:18,0:18:45.10:0,45,502	0/0:28,0:28:78.20:0,78,869	0/0:33,0:33:93.24:0,93,1037	0/0:5,0:5:15.04:0,15,167
chr10	26488727	.	ACTT	A	592.28	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.248;DP=446;FS=9.020;HRun=0;HaplotypeScore=65.7504;InbreedingCoeff=0.9083;MQ=77.23;MQ0=0;MQRankSum=-0.056;QD=39.49;ReadPosRankSum=1.102;VQSLOD=3.7626;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:60.12:0,60,1220	0/0:5,0:5:15.05:0,15,340	0/0:22,0:22:57.17:0,57,1159	0/0:9,0:8:9.58:0,10,205	0/0:23,0:23:63.22:0,63,1403	0/0:17,0:17:45.14:0,45,935	0/0:13,0:13:36.11:0,36,769	0/0:26,0:26:69.21:0,69,1440	0/0:18,0:18:48.16:0,48,1050	0/0:22,0:22:60.15:0,60,1233	0/0:21,0:21:60.19:0,60,1316	0/0:9,0:9:27.09:0,27,611	0/0:15,0:15:45.15:0,45,1016	0/0:16,0:16:45.14:0,45,941	1/1:1,14:15:42.14:687,42,0	0/0:20,0:20:60.21:0,60,1360	0/0:18,0:18:51.16:0,51,1110	0/0:6,0:6:15.05:0,15,339	0/0:21,0:21:59.87:0,60,1183	0/0:13,0:13:33.11:0,33,724	0/0:19,0:19:54.17:0,54,1158	0/0:15,0:15:45.15:0,45,1016	0/0:16,0:16:48.15:0,48,1026	0/0:5,0:5:15.05:0,15,339	0/0:14,0:14:42.10:0,42,902	0/0:14,0:14:42.14:0,42,900	0/0:17,0:17:48.16:0,48,1081	0/0:15,0:15:42.14:0,42,951
chr10	26488960	.	CCT	C	1229.69	PASS	AB=0.843;AC=18;AF=0.321;AN=56;BaseQRankSum=10.582;DP=439;FS=10.880;HRun=0;HaplotypeScore=154.5040;InbreedingCoeff=-0.4743;MQ=48.65;MQ0=11;MQRankSum=-9.083;QD=4.80;ReadPosRankSum=-5.343;VQSLOD=0.4427;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:23,3:25:35.13:35,0,854	0/0:4,0:4:12.04:0,12,244	0/0:28,0:5:12.93:0,13,233	0/0:47,0:17:42.38:0,42,813	0/0:8,4:12:9.81:0,10,411	0/1:11,3:14:94.06:94,0,422	0/1:10,2:11:14.04:14,0,461	0/0:18,0:18:51.13:0,51,880	0/1:16,4:20:96.84:97,0,736	0/1:4,3:7:99:103,0,223	0/1:11,3:14:72.03:72,0,583	0/1:15,4:18:99:121,0,737	0/1:17,2:19:39.32:39,0,786	0/1:16,7:23:99:190,0,720	0/0:2,0:2:6.02:0,6,122	0/0:18,0:17:28.06:0,28,889	0/1:9,2:10:35.57:36,0,231	0/1:6,1:7:17.14:17,0,283	0/1:7,1:8:62.12:62,0,321	0/1:6,3:9:86.05:86,0,260	0/0:16,0:16:45.15:0,45,867	0/1:8,2:10:83.53:84,0,335	0/1:14,2:16:70.78:71,0,626	0/0:20,2:21:20.82:0,21,850	0/1:14,6:20:99:220,0,635	0/0:15,1:16:17.73:0,18,823	0/1:13,0:13:43.58:44,0,452	0/1:7,1:8:2.60:3,0,399
chr10	26488979	.	TCTTTC	T	1483.33	PASS	AB=0.870;AC=19;AF=0.339;AN=56;BaseQRankSum=4.366;DP=437;FS=13.165;HRun=0;HaplotypeScore=177.8865;InbreedingCoeff=-0.5238;MQ=42.95;MQ0=19;MQRankSum=-8.160;QD=4.88;ReadPosRankSum=-2.125;VQSLOD=1.2740;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:28:28.08:28,0,943	0/0:4,0:4:12.04:0,12,353	0/0:14,0:2:5.05:0,5,90	0/0:27,0:10:27.06:0,27,474	0/1:9,4:13:78.29:78,0,375	0/1:16,3:17:99:199,0,384	0/1:15,2:15:47.35:47,0,551	0/0:17,0:15:41.49:0,41,755	0/1:15,4:19:55.18:55,0,1016	0/1:6,3:8:89.82:90,0,304	0/1:10,3:13:80:80,0,575	0/1:17,4:19:99:106,0,1015	0/1:15,2:17:46.50:47,0,745	0/1:16,7:21:99:205,0,770	0/0:8,0:8:22.14:0,22,247	0/0:16,0:15:29.94:0,30,1213	0/1:10,2:11:96.61:97,0,211	0/1:8,1:8:44.44:44,0,103	0/1:8,1:9:61.94:62,0,339	0/1:12,3:14:99:143,0,308	0/0:13,0:12:27.09:0,27,587	0/1:7,2:9:99:104,0,264	0/1:17,2:19:99:103,0,877	0/0:23,0:21:29.86:0,30,979	0/1:16,1:16:73.49:73,0,531	0/1:17,0:17:6.06:6,0,1036	0/1:16,0:16:73.28:73,0,673	0/0:9,0:7:7.86:0,8,476
chr10	26488982	.	TTC	T	3937.92	PASS	AB=0.829;AC=23;AF=0.411;AN=56;BaseQRankSum=2.367;DP=442;FS=17.338;HRun=0;HaplotypeScore=150.2347;InbreedingCoeff=-0.7275;MQ=42.18;MQ0=17;MQRankSum=-9.026;QD=10.42;ReadPosRankSum=-2.128;VQSLOD=1.8916;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:21,7:26:99:153,0,461	0/0:4,0:4:12.04:0,12,184	0/0:14,0:2:0.24:0,0,41	0/0:24,0:7:14.72:0,15,175	0/1:11,3:14:99:226,0,129	0/1:11,8:17:99:373,0,151	0/1:12,6:16:95.27:95,0,244	0/1:14,3:15:38.27:38,0,351	0/1:20,0:20:99:240,0,465	0/1:8,2:9:99:166,0,124	0/1:12,0:12:99:121,0,242	0/1:23,0:21:99:144,0,470	0/1:13,5:18:99:200,0,337	0/1:20,4:22:99:354,0,373	0/0:9,0:9:14.79:0,15,118	0/1:15,2:16:27.37:27,0,586	0/1:10,1:10:60.39:122,0,60	0/1:5,4:8:31.42:76,0,31	0/1:8,3:11:99:137,0,168	0/1:9,7:15:99:311,0,128	0/0:12,1:12:18.06:0,18,248	0/1:6,3:9:99:216,0,123	0/1:14,4:18:99:273,0,383	0/1:23,2:23:64.33:64,0,442	0/1:10,7:16:99:302,0,205	0/1:13,4:17:99:112,0,469	0/1:8,8:16:99:175,0,301	0/1:9,0:7:14:14,0,202
chr10	26489021	.	T	TC	1190.85	PASS	AB=0.862;AC=16;AF=0.286;AN=56;BaseQRankSum=5.027;DP=452;FS=2.738;HRun=0;HaplotypeScore=121.3179;InbreedingCoeff=-0.3929;MQ=59.64;MQ0=11;MQRankSum=-8.453;QD=4.13;ReadPosRankSum=-3.497;VQSLOD=3.0491;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:26,5:29:49.84:50,0,658	0/1:3,0:3:14.20:14,0,58	0/0:17,0:13:36.12:0,36,496	0/0:14,0:11:25.32:0,25,325	0/0:19,0:19:51.13:0,51,688	0/1:23,2:23:49.85:50,0,675	0/0:15,1:14:30.04:0,30,363	0/0:20,0:20:54:0,54,712	0/1:16,4:20:99:125,0,516	0/1:13,1:13:7.59:8,0,464	0/1:10,1:11:3.19:3,0,386	0/1:13,5:17:99:175,0,234	0/1:15,2:17:73.94:74,0,359	0/1:24,3:25:22.46:22,0,791	0/0:12,0:12:36.02:0,36,457	0/1:9,7:15:99:204,0,275	0/0:9,1:9:7.11:0,7,275	0/0:10,0:9:19.58:0,20,268	0/1:11,1:12:10.50:10,0,398	0/0:16,0:15:36.95:0,37,540	0/0:10,2:11:7.34:0,7,293	0/1:9,3:12:93.36:93,0,340	0/1:17,5:22:99:183,0,562	0/0:14,0:12:30.07:0,30,418	0/1:17,3:19:63.52:64,0,583	0/1:15,4:19:99:129,0,536	0/1:16,5:21:99:141,0,493	0/0:4,0:4:12.04:0,12,156
chr10	26489263	.	A	ATCTTT	35574.71	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-8.515;DP=613;FS=12.645;HRun=0;HaplotypeScore=84.4230;InbreedingCoeff=0.9370;MQ=74.89;MQ0=0;MQRankSum=-9.499;QD=62.63;ReadPosRankSum=5.230;VQSLOD=5.0112;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,18:20:38.24:979,38,0	1/1:0,7:10:21.03:557,21,0	0/0:23,0:23:49.85:0,50,924	0/0:22,0:22:49.95:0,50,895	1/1:0,31:37:93.12:2288,93,0	1/1:3,25:28:65.43:1888,65,0	1/1:1,12:17:24.08:715,24,0	1/1:2,27:33:93.31:2333,93,0	1/1:3,23:26:57.19:1701,57,0	1/1:0,21:22:66.23:1884,66,0	1/1:2,19:22:60.18:1633,60,0	1/1:0,21:21:57.20:1701,57,0	1/1:4,21:27:57.20:1699,57,0	1/1:2,14:18:45.15:1257,45,0	1/1:2,13:20:36.12:1042,36,0	1/1:0,17:18:45.15:1331,45,0	1/1:0,22:26:51.18:1503,51,0	1/1:2,3:6:7.84:185,8,0	1/1:3,15:19:54.13:1419,54,0	1/1:2,16:19:42.14:1220,42,0	1/1:2,14:16:33.11:934,33,0	1/1:4,13:19:33.07:915,33,0	1/1:2,16:21:45.12:1292,45,0	1/1:1,20:24:48.16:1433,48,0	1/1:3,18:24:42.14:1240,42,0	1/1:3,27:33:84.21:2092,84,0	1/1:5,29:36:70.48:2061,70,0	1/1:1,4:5:9.92:271,10,0
chr10	26490566	.	T	TACACACAC	3832.09	PASS	AB=0.828;AC=46;AF=0.958;AN=48;BaseQRankSum=-2.176;DP=651;FS=0.000;HRun=0;HaplotypeScore=193.5595;InbreedingCoeff=0.1332;MQ=61.95;MQ0=17;MQRankSum=0.898;QD=7.16;ReadPosRankSum=0.259;VQSLOD=1.7590;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:34,0:34:6.55:151,7,0	./.	./.	./.	1/1:15,0:13:2.99:65,3,0	1/1:23,0:22:15.91:243,16,0	1/1:20,0:19:0.47:1,0,0	1/1:25,0:24:0.47:1,0,0	1/1:22,0:29:8.70:113,9,0	1/1:15,0:24:27.06:462,27,0	0/1:13,6:23:0:0,0,0	./.	1/1:19,0:19:5.91:112,6,0	1/1:18,0:19:3.01:64,3,0	1/1:32,0:29:12.01:166,12,0	1/1:27,0:27:8.92:150,9,0	1/1:23,0:22:29.13:571,29,0	1/1:8,0:10:8.99:156,9,0	1/1:23,0:21:9.03:204,9,0	1/1:14,0:14:3:25,3,0	1/1:17,0:16:6.01:68,6,0	1/1:13,0:13:2.99:68,3,0	0/1:22,0:23:6.61:103,0,7	1/1:39,0:39:3.62:43,4,0	1/1:23,6:30:3.01:99,3,0	1/1:29,0:29:39.11:580,39,0	1/1:12,0:12:15.03:338,15,0	1/1:4,0:3:3.48:50,3,0
chr10	26491829	.	TAGTAAA	T	22707.21	PASS	AB=0.583;AC=51;AF=0.911;AN=56;BaseQRankSum=6.782;DP=428;FS=61.979;HRun=0;HaplotypeScore=132.4276;InbreedingCoeff=0.7076;MQ=70.88;MQ0=0;MQRankSum=-8.911;QD=58.22;ReadPosRankSum=7.330;VQSLOD=2.4466;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,13:13:36.12:884,36,0	1/1:1,10:11:21.07:517,21,0	0/0:21,0:21:60.21:0,60,1906	0/0:17,0:17:47.58:0,48,1381	1/1:2,23:25:63.22:1546,63,0	1/1:3,13:16:33.11:810,33,0	1/1:1,8:9:21.07:516,21,0	1/1:0,17:17:48.16:1174,48,0	1/1:1,15:16:33.11:811,33,0	1/1:1,16:17:48.60:1123,49,0	1/1:0,17:17:42.14:1033,42,0	1/1:0,13:13:30.10:736,30,0	1/1:1,16:17:42.14:1031,42,0	1/1:2,13:15:30.10:738,30,0	1/1:1,18:19:54.19:1326,54,0	1/1:0,15:15:36.12:885,36,0	1/1:0,15:15:33.11:812,33,0	1/1:0,8:8:18.06:429,18,0	1/1:0,13:12:36.07:766,36,0	1/1:0,15:15:45.15:1107,45,0	0/1:6,15:21:26.44:756,0,26	1/1:1,10:11:27.09:664,27,0	1/1:1,13:14:21.07:516,21,0	1/1:0,3:3:3.01:74,3,0	1/1:1,20:21:57.20:1401,57,0	1/1:2,17:19:54.19:1284,54,0	1/1:1,21:22:60.21:1474,60,0	1/1:0,8:8:12.04:295,12,0
chr10	26491831	.	GTAAA	G	8468.74	PASS	AB=1.000;AC=51;AF=0.911;AN=56;BaseQRankSum=9.201;DP=420;FS=64.890;HRun=0;HaplotypeScore=166.6170;InbreedingCoeff=0.7070;MQ=73.46;MQ0=0;MQRankSum=-9.438;QD=22.34;ReadPosRankSum=7.941;VQSLOD=1.9458;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:13:36.04:333,36,0	1/1:10,0:10:21.02:196,21,0	0/0:21,0:21:63.21:0,63,1613	0/0:20,0:20:50.12:0,50,1281	1/1:23,2:25:63.07:585,63,0	1/1:13,1:14:33.04:306,33,0	1/1:8,0:8:21.02:195,21,0	1/1:17,0:17:48.03:440,48,0	1/1:15,0:15:33.04:306,33,0	1/1:17,0:17:45.04:416,45,0	1/1:17,0:17:42.05:391,42,0	1/1:13,0:13:30.03:278,30,0	1/1:16,1:17:42.05:392,42,0	1/1:13,0:13:30.03:279,30,0	1/1:18,1:19:54.06:502,54,0	1/1:15,0:15:36.04:335,36,0	1/1:15,0:15:33.04:307,33,0	1/1:8,0:8:17.86:153,18,0	1/1:13,0:12:29.85:260,30,0	1/1:15,0:15:45.05:419,45,0	0/1:21,0:21:74.49:231,0,74	1/1:11,0:11:27.03:251,27,0	1/1:13,0:13:21.02:195,21,0	1/1:3,0:3:3:28,3,0	1/1:20,0:20:57.06:530,57,0	1/1:18,0:18:53.60:471,54,0	1/1:21,0:21:60.06:557,60,0	1/1:8,0:8:12.01:112,12,0
chr10	26491836	.	A	AAGAGTC	7964	PASS	AB=0.988;AC=23;AF=0.411;AN=56;BaseQRankSum=-13.166;DP=487;FS=15.487;HRun=0;HaplotypeScore=206.4586;InbreedingCoeff=-0.5531;MQ=69.29;MQ0=0;MQRankSum=-1.980;QD=19.47;ReadPosRankSum=-9.344;VQSLOD=1.1387;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:16,0:16:86.92:323,0,87	0/0:12,0:12:19.83:0,20,111	0/0:20,0:20:54.19:0,54,1202	0/0:23,0:23:58.27:0,58,1123	0/1:26,0:26:99:480,0,128	0/1:16,0:16:91.63:171,0,92	0/1:11,0:11:1.56:291,0,2	1/1:27,0:27:0.31:944,0,0	0/1:15,0:15:92.91:151,0,93	0/1:21,0:21:64.70:457,0,65	0/1:19,0:19:99:118,0,132	0/1:16,0:16:75.41:383,0,75	0/1:18,0:18:99:141,0,119	0/1:15,0:15:66.74:176,0,67	0/1:23,0:23:99:587,0,120	0/1:19,0:19:92.21:487,0,92	0/1:18,0:18:80.66:207,0,81	0/1:9,0:9:22.88:173,0,23	0/1:18,0:17:4.53:735,0,5	0/1:16,0:16:99:169,0,152	0/1:18,6:24:77.87:299,0,78	0/0:12,0:12:25.70:0,26,131	0/1:15,0:15:25.47:222,0,25	0/0:3,0:3:2.88:0,3,15	0/1:21,0:21:99:392,0,151	0/1:22,1:23:73.12:653,0,73	0/1:23,0:23:99:405,0,128	0/0:8,0:8:11.18:0,11,52
chr10	26492574	.	TCAAGGGAAAGGCCAGGCTGGAGTGCCTGGTCCA	T	48721.99	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=9.640;DP=533;FS=0.000;HRun=0;HaplotypeScore=463.3685;InbreedingCoeff=0.6992;MQ=72.09;MQ0=0;MQRankSum=-9.816;QD=101.93;ReadPosRankSum=9.734;VQSLOD=2.3933;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:26,9:35:11.89:1015,12,0	1/1:4,6:10:18.06:1539,18,0	0/0:23,0:23:57.65:0,58,2968	0/0:32,0:31:41.65:0,42,4217	1/1:13,9:22:21.07:1703,21,0	1/1:4,6:10:12.04:1019,12,0	1/1:12,10:22:18.06:1477,18,0	1/1:21,0:21:6.02:115,6,0	1/1:4,11:15:27.09:2299,27,0	1/1:12,16:28:45.11:2982,45,0	1/1:7,10:17:18.06:1475,18,0	1/1:11,13:24:39.13:3205,39,0	1/1:11,15:26:42.14:3601,42,0	1/1:5,12:17:27.09:2291,27,0	1/1:11,16:27:48.16:4103,48,0	1/1:5,16:21:30.48:2554,30,0	1/1:8,11:19:9.03:776,9,0	1/1:7,3:10:6.02:517,6,0	1/1:8,5:13:15.05:1086,15,0	1/1:9,9:18:24.08:2035,24,0	1/1:13,2:15:2.71:257,3,0	1/1:6,6:12:12.04:1035,12,0	1/1:7,13:20:33.11:2753,33,0	1/1:4,10:14:18.06:1488,18,0	1/1:2,9:11:21.07:1810,21,0	1/1:6,16:22:48.16:3222,48,0	1/1:9,17:26:48.16:4105,48,0	1/1:1,2:3:3.01:259,3,0
chr10	26493518	.	T	TCC	658.62	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=6.756;DP=623;FS=4.068;HRun=7;HaplotypeScore=71.6026;InbreedingCoeff=0.9414;MQ=62.47;MQ0=11;MQRankSum=2.733;QD=11.76;ReadPosRankSum=1.270;VQSLOD=0.0895;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:96.24:0,96,1085	0/0:6,0:6:15.04:0,15,175	0/0:30,0:17:37.04:0,37,385	0/0:19,0:12:23.01:0,23,275	0/0:20,0:20:60.17:0,60,688	0/0:24,0:24:60.16:0,60,699	0/0:23,0:23:57.17:0,57,663	1/1:15,6:20:12.03:164,12,0	0/0:22,0:22:66.20:0,66,769	0/0:24,0:24:66.17:0,66,756	0/0:30,0:30:81.19:0,81,903	0/0:18,0:18:48.13:0,48,559	0/0:32,0:32:84.24:0,84,977	0/0:15,0:15:45.11:0,45,503	1/1:5,0:20:30.05:291,30,0	0/0:23,0:23:66.18:0,66,759	1/1:1,11:12:21.07:342,21,0	0/0:25,1:26:17.12:0,17,659	0/0:16,0:15:36.10:0,36,418	0/0:31,0:31:78:0,78,876	0/0:18,0:18:45.09:0,45,510	0/0:20,0:20:51.14:0,51,594	0/0:19,0:19:48.14:0,48,559	0/0:22,0:22:54.16:0,54,628	0/0:28,0:28:81.20:0,81,914	0/0:22,0:22:57.14:0,57,646	0/0:39,0:39:99:0,111,1256	0/0:3,0:3:6.02:0,6,70
chr10	26494286	.	A	AT	6271.35	PASS	AB=0.993;AC=44;AF=0.786;AN=56;BaseQRankSum=4.488;DP=506;FS=0.634;HRun=0;HaplotypeScore=82.0681;InbreedingCoeff=0.1440;MQ=69.05;MQ0=0;MQRankSum=-4.468;QD=12.64;ReadPosRankSum=9.860;VQSLOD=4.8309;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:22:54.67:240,55,0	0/1:7,0:7:6.16:42,0,6	0/0:6,0:6:11.99:0,12,144	0/0:4,0:4:8.10:0,8,44	0/1:33,0:33:57.03:180,0,57	1/1:24,0:24:65.04:277,65,0	0/1:10,0:10:0.40:62,0,0	1/1:1,22:23:66.20:967,66,0	1/1:13,0:13:5.16:89,5,0	1/1:23,0:23:58.83:233,59,0	1/1:26,0:26:19.69:192,20,0	1/1:16,0:16:34.14:132,34,0	1/1:23,0:23:54.12:232,54,0	1/1:13,0:13:31.40:121,31,0	1/1:1,20:21:57.19:872,57,0	0/1:19,0:19:34:91,0,34	1/1:2,28:30:72.24:1101,72,0	1/1:17,0:17:21.82:164,22,0	1/1:27,0:27:32.37:192,32,0	1/1:23,0:23:59.01:239,59,0	1/1:10,0:10:21.42:86,21,0	0/1:24,0:24:10.71:149,0,11	0/1:15,0:16:35:126,0,35	1/1:8,0:8:16.07:65,16,0	1/1:13,0:13:4.13:83,4,0	1/1:19,0:19:16.81:133,17,0	0/1:25,0:25:4.38:152,0,4	0/1:11,0:11:25.78:52,0,26
chr10	26494953	.	C	CTTT	2001.79	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=3.584;DP=550;FS=0.000;HRun=8;HaplotypeScore=75.8118;InbreedingCoeff=0.9760;MQ=72.87;MQ0=0;MQRankSum=-1.022;QD=26.69;ReadPosRankSum=-2.158;VQSLOD=1.2554;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:25.42:0,25,568	0/0:4,0:5:10.59:0,11,155	0/0:10,0:9:18:0,18,210	0/0:12,0:12:21.06:0,21,272	0/0:32,0:32:78.16:0,78,1006	0/0:25,0:25:66.18:0,66,864	0/0:10,0:10:30.10:0,30,393	1/1:10,0:34:62.83:568,63,0	0/0:15,0:16:40.68:0,41,549	0/0:30,0:30:75.20:0,75,985	0/0:30,0:32:82.74:0,83,1100	0/0:11,0:12:30.01:0,30,372	0/0:18,0:18:51.14:0,51,654	0/0:30,0:30:81.23:0,81,1046	1/1:2,22:27:66.20:1278,66,0	0/0:22,0:22:63.16:0,63,798	1/1:1,0:14:38.85:299,39,0	0/0:11,0:11:24.07:0,24,314	0/0:14,0:13:33.07:0,33,434	0/0:25,0:25:66.20:0,66,864	0/0:6,0:6:18.04:0,18,221	0/0:14,0:14:42.12:0,42,536	0/0:32,0:32:81.22:0,81,1058	0/0:14,0:14:36.11:0,36,473	0/0:17,0:17:45.12:0,45,591	0/0:23,0:23:63.19:0,63,828	0/0:37,0:38:99:0,108,1368	0/0:9,0:9:27.09:0,27,355
chr10	26495182	.	G	GT	1477.33	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-3.244;DP=629;FS=0.557;HRun=7;HaplotypeScore=58.7773;InbreedingCoeff=0.9908;MQ=79.26;MQ0=0;MQRankSum=-1.958;QD=25.47;ReadPosRankSum=-1.693;VQSLOD=3.3880;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:60.06:0,60,567	0/0:8,0:8:24.02:0,24,226	0/0:17,0:17:29.58:0,30,289	0/0:12,0:12:26.99:0,27,247	0/0:32,0:32:78.12:0,78,753	0/0:26,0:26:72.11:0,72,695	0/0:22,0:22:57.07:0,57,544	1/1:3,26:29:75.17:859,75,0	0/0:22,0:22:63.10:0,63,608	0/0:33,0:33:90.13:0,90,865	0/0:22,0:22:56.74:0,57,526	0/0:24,0:24:69.10:0,69,662	0/0:28,0:28:81.13:0,81,782	0/0:33,0:33:84.13:0,84,811	1/1:3,16:19:39.12:471,39,0	0/0:28,0:28:84.11:0,84,801	1/1:0,10:10:24.07:290,24,0	0/0:6,0:6:15.02:0,15,144	0/0:19,0:19:51.05:0,51,482	0/0:34,0:34:90.14:0,90,869	0/0:21,0:21:57.09:0,57,550	0/0:25,0:25:66.10:0,66,637	0/0:26,0:26:69.08:0,69,659	0/0:15,0:15:39.06:0,39,376	0/0:30,0:30:84.07:0,84,796	0/0:25,0:25:66.09:0,66,629	0/0:36,0:36:99:0,108,1030	0/0:7,0:7:21.03:0,21,203
chr10	26496798	.	TAA	T	7495.41	PASS	AB=0.769;AC=53;AF=0.946;AN=56;BaseQRankSum=-2.402;DP=533;FS=0.000;HRun=11;HaplotypeScore=61.6604;InbreedingCoeff=0.5945;MQ=45.51;MQ0=13;MQRankSum=-1.834;QD=14.61;ReadPosRankSum=2.873;VQSLOD=2.9764;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,30:31:25.28:427,25,0	1/1:1,8:8:18.03:192,18,0	0/0:18,0:9:12.04:0,12,176	0/1:7,1:4:1.89:2,0,94	1/1:3,18:19:27.05:287,27,0	1/1:4,23:23:42.11:447,42,0	1/1:2,13:10:15.02:160,15,0	1/1:5,9:7:5.98:64,6,0	1/1:1,17:17:33.08:351,33,0	1/1:3,18:20:51.01:542,51,0	1/1:6,17:21:18.03:192,18,0	1/1:1,13:13:24.06:255,24,0	1/1:2,15:14:27.07:287,27,0	1/1:4,19:24:30.02:319,30,0	1/1:7,27:30:44.84:459,45,0	1/1:6,15:21:27.04:287,27,0	1/1:2,11:12:15.02:160,15,0	1/1:2,16:17:33.06:351,33,0	1/1:5,10:8:18.04:192,18,0	1/1:2,18:20:32.93:351,33,0	1/1:6,4:8:2.99:32,3,0	1/1:5,18:19:21.04:223,21,0	1/1:0,17:14:27.07:287,27,0	1/1:1,13:14:24.06:255,24,0	1/1:1,13:14:6.02:64,6,0	1/1:1,28:28:75.17:798,75,0	1/1:4,22:24:36.07:383,36,0	1/1:1,4:5:12.03:128,12,0
chr10	26497087	.	GA	G	1125.85	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=4.627;DP=374;FS=1.535;HRun=2;HaplotypeScore=33.9400;InbreedingCoeff=0.8093;MQ=50.06;MQ0=33;MQRankSum=0.670;QD=22.98;ReadPosRankSum=1.403;VQSLOD=3.4738;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:54.17:0,54,788	0/0:9,0:9:27.08:0,27,386	0/0:23,0:1:3:0,3,25	0/0:26,0:1:3.01:0,3,39	0/0:5,0:5:15.05:0,15,217	0/0:7,0:7:15.05:0,15,225	0/0:21,0:19:51.13:0,51,700	1/1:3,9:6:15.05:194,15,0	0/0:16,0:16:39.09:0,39,540	0/0:10,0:9:27.05:0,27,379	0/0:5,0:5:12.04:0,12,180	0/0:10,0:10:24.08:0,24,358	0/0:16,0:15:33.10:0,33,473	0/0:14,0:14:27.07:0,27,382	1/1:1,13:14:24.08:311,24,0	0/0:18,0:18:30.10:0,30,442	1/1:3,20:23:60.17:760,60,0	0/0:16,0:16:42.14:0,42,629	0/0:13,0:4:12.03:0,12,162	0/0:11,0:10:30.10:0,30,449	0/0:15,0:14:42.11:0,42,594	0/0:5,0:5:8.95:0,9,134	0/0:4,0:4:9.03:0,9,132	0/0:18,0:18:45.15:0,45,674	0/0:17,0:17:42.14:0,42,629	0/0:10,0:10:30.10:0,30,449	0/0:9,0:9:20.10:0,20,276	0/0:4,0:4:12.04:0,12,164
chr10	26497136	.	T	TG	2232.17	PASS	AB=0.675;AC=44;AF=0.786;AN=56;BaseQRankSum=-1.993;DP=252;FS=14.228;HRun=10;HaplotypeScore=48.6355;InbreedingCoeff=0.1292;MQ=71.04;MQ0=0;MQRankSum=-5.063;QD=9.83;ReadPosRankSum=0.553;VQSLOD=0.7332;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:5,15:19:9.69:98,0,10	1/1:1,2:3:3.01:32,3,0	0/0:11,0:10:20.86:0,21,161	0/0:11,0:10:17.95:0,18,147	1/1:2,4:6:3.01:32,3,0	1/1:6,1:6:6.02:64,6,0	1/1:2,14:16:30.08:320,30,0	0/1:5,3:8:12.15:84,0,12	1/1:7,6:13:20.94:201,21,0	0/1:7,5:11:6.63:125,0,7	1/1:2,8:10:12.03:128,12,0	1/1:4,5:8:18.03:185,18,0	1/1:4,3:7:3.01:32,3,0	1/1:7,3:9:14.96:145,15,0	1/1:6,2:8:3.01:32,3,0	1/1:5,4:9:6.02:64,6,0	0/1:13,5:18:16.31:223,0,16	1/1:2,4:6:6.02:64,6,0	0/1:3,4:7:12.60:83,0,13	0/1:2,3:5:18.60:26,0,19	1/1:6,7:13:6.02:64,6,0	1/1:3,3:6:6.02:64,6,0	0/0:3,0:3:2.98:0,3,25	1/1:6,3:9:9.02:96,9,0	1/1:2,5:7:6.02:64,6,0	1/1:6,3:9:9.49:97,9,0	1/1:6,2:8:3:32,3,0	1/1:0,1:1:3.01:32,3,0
chr10	26497288	.	A	AAC	1855.97	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-2.696;DP=287;FS=0.000;HRun=0;HaplotypeScore=34.0555;InbreedingCoeff=0.8773;MQ=69.69;MQ0=0;MQRankSum=0.678;QD=34.37;ReadPosRankSum=-2.963;VQSLOD=3.7452;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:27.08:0,27,377	0/0:8,0:8:24.08:0,24,345	0/0:8,0:7:21.02:0,21,263	0/0:6,0:6:17.80:0,18,188	0/0:10,0:10:27.05:0,27,391	0/0:16,0:16:48.15:0,48,680	0/0:5,0:5:15:0,15,178	1/1:1,25:28:77.78:1236,78,0	0/0:4,0:4:12.03:0,12,157	0/0:9,0:9:21.07:0,21,304	0/0:12,0:12:30.10:0,30,438	0/0:9,0:9:27.09:0,27,394	0/0:6,0:6:18.06:0,18,263	0/0:8,0:8:24.06:0,24,306	1/1:0,0:13:37.38:194,37,0	0/0:8,0:8:24.07:0,24,335	1/1:0,12:13:30.10:568,30,0	0/0:17,0:17:51.15:0,51,708	0/0:10,0:10:30.09:0,30,419	0/0:18,0:18:48.16:0,48,701	0/0:6,0:6:18.05:0,18,246	0/0:2,0:2:6.02:0,6,88	0/0:6,0:6:18.06:0,18,263	0/0:1,0:1:3.01:0,3,44	0/0:20,0:20:60.19:0,60,843	0/0:8,0:8:24.08:0,24,351	0/0:15,0:15:45.13:0,45,622	0/0:11,0:11:33.10:0,33,463
chr10	26498080	.	A	AT	4300.06	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=0.665;DP=700;FS=0.396;HRun=1;HaplotypeScore=69.0146;InbreedingCoeff=0.9936;MQ=79.42;MQ0=0;MQRankSum=-2.486;QD=40.19;ReadPosRankSum=-1.359;VQSLOD=4.8273;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:96.31:0,96,1246	0/0:13,0:13:39.13:0,39,506	0/0:13,0:13:36.11:0,36,448	0/0:20,0:20:48.12:0,48,589	0/0:28,0:28:75.24:0,75,974	0/0:23,0:23:69.21:0,69,881	0/0:26,0:26:78.24:0,78,998	1/1:3,31:34:96.26:1333,96,0	0/0:26,0:26:78.24:0,78,997	0/0:23,0:23:69.22:0,69,896	0/0:25,0:25:72.21:0,72,907	0/0:20,0:20:57.19:0,57,739	0/0:30,0:30:90.29:0,90,1167	0/0:35,0:35:99:0,105,1350	1/1:0,33:33:96.33:1439,96,0	0/0:27,0:27:81.24:0,81,1025	1/1:1,39:39:99:1528,102,0	0/0:5,0:5:15.05:0,15,194	0/0:24,0:24:72.23:0,72,923	0/0:36,0:36:99:0,108,1386	0/0:31,0:31:93.30:0,93,1207	0/0:26,0:26:75.23:0,75,960	0/0:24,0:24:72.21:0,72,916	0/0:17,0:17:51.17:0,51,661	0/0:24,0:24:66.21:0,66,845	0/0:28,0:28:84.26:0,84,1079	0/0:28,0:28:84.26:0,84,1076	0/0:9,0:9:24.08:0,24,312
chr10	26498282	.	C	CT	3847.64	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-6.030;DP=735;FS=12.561;HRun=2;HaplotypeScore=74.2124;InbreedingCoeff=0.9993;MQ=83.40;MQ0=0;MQRankSum=-1.815;QD=40.50;ReadPosRankSum=-3.557;VQSLOD=1.4083;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,99,1212	0/0:11,0:11:30.09:0,30,372	0/0:24,0:24:59.86:0,60,717	0/0:21,0:21:31.82:0,32,473	0/0:27,0:27:81.25:0,81,1004	0/0:28,0:28:84.24:0,84,1017	0/0:25,0:25:69.22:0,69,855	1/1:4,38:42:99:1621,114,0	0/0:28,0:28:84.21:0,84,1012	0/0:32,0:32:84.25:0,84,1031	0/0:29,0:29:84.25:0,84,1030	0/0:20,0:20:57.18:0,57,707	0/0:33,0:33:93.26:0,93,1126	0/0:27,0:27:75.21:0,75,914	1/1:1,36:37:99:1579,111,0	0/0:22,0:22:63.20:0,63,781	1/1:0,16:16:45.15:647,45,0	0/0:17,0:17:51.16:0,51,631	0/0:16,0:16:42.12:0,42,509	0/0:31,0:31:87.26:0,87,1065	0/0:27,0:27:81.25:0,81,1002	0/0:30,0:30:84.26:0,84,1041	0/0:23,0:23:66.21:0,66,818	0/0:19,0:19:57.17:0,57,694	0/0:27,0:27:81.23:0,81,988	0/0:38,0:38:99:0,111,1376	0/0:39,0:38:99:0,114,1399	0/0:11,0:11:27.08:0,27,331
chr10	26498342	.	TAGAC	T	3528.79	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=12.195;DP=666;FS=3.734;HRun=0;HaplotypeScore=114.6982;InbreedingCoeff=0.9984;MQ=94.65;MQ0=0;MQRankSum=-11.430;QD=54.29;ReadPosRankSum=-2.178;VQSLOD=4.4718;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:81.25:0,81,2225	0/0:13,0:13:36.12:0,36,1005	0/0:37,0:37:99:0,108,2705	0/0:26,0:26:76.48:0,76,1986	0/0:33,0:33:99:0,99,2799	0/0:22,0:22:60.19:0,60,1606	0/0:16,0:16:48.16:0,48,1390	1/1:0,24:24:72.23:1433,72,0	0/0:29,0:29:87.28:0,87,2453	0/0:22,0:22:66.18:0,66,1788	0/0:25,0:25:75.26:0,75,2157	0/0:15,0:15:45.14:0,45,1242	0/0:30,0:30:90.29:0,90,2486	0/0:22,0:22:63.20:0,63,1725	1/1:2,27:29:81.23:1542,81,0	0/0:22,0:22:66.23:0,66,1873	1/1:3,9:12:33.50:554,33,0	0/0:15,0:15:42.14:0,42,1129	0/0:22,0:22:66.23:0,66,1865	0/0:35,0:35:99:0,105,2814	0/0:25,0:25:75.26:0,75,2116	0/0:25,0:25:75.26:0,75,2118	0/0:30,0:30:90.31:0,90,2454	0/0:18,0:18:51.16:0,51,1415	0/0:22,0:22:63.21:0,63,1737	0/0:39,0:39:99:0,117,3225	0/0:23,0:23:66.23:0,66,1777	0/0:7,0:7:21.07:0,21,584
chr10	26498727	.	GA	G	2107.98	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-10.172;DP=581;FS=0.456;HRun=7;HaplotypeScore=90.3495;InbreedingCoeff=0.9777;MQ=80.84;MQ0=0;MQRankSum=-1.387;QD=24.23;ReadPosRankSum=-3.213;VQSLOD=2.1834;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:63.20:0,63,792	0/0:6,0:6:15.05:0,15,189	0/0:19,0:19:51.16:0,51,625	0/0:13,0:13:36.11:0,36,437	0/0:32,0:32:93.26:0,93,1130	0/0:19,0:19:51.16:0,51,642	0/0:10,0:10:30.08:0,30,355	1/1:4,37:41:99:1088,108,0	0/0:21,0:21:60.19:0,60,755	0/0:39,0:39:99:0,102,1276	0/0:23,0:23:66.21:0,66,830	0/0:19,0:19:54.16:0,54,665	0/0:21,0:21:60.19:0,60,755	0/0:18,0:18:51.16:0,51,642	1/1:2,28:30:75.17:765,75,0	0/0:23,0:23:63.20:0,63,793	1/1:1,15:16:39.09:398,39,0	0/0:13,0:13:33.08:0,33,398	0/0:20,0:20:57.18:0,57,716	0/0:26,0:26:72.23:0,72,901	0/0:14,0:14:39.12:0,39,491	0/0:22,0:22:63.20:0,63,793	0/0:25,0:25:69.20:0,69,844	0/0:6,0:6:15.05:0,15,189	0/0:17,0:17:45.14:0,45,566	0/0:29,0:29:84.27:0,84,1057	0/0:33,0:33:99:0,99,1216	0/0:4,0:4:12.04:0,12,151
chr10	26499435	.	T	TAA	3410.05	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=11.563;DP=447;FS=4.501;HRun=7;HaplotypeScore=59.9078;InbreedingCoeff=0.9162;MQ=74.22;MQ0=0;MQRankSum=-3.884;QD=42.63;ReadPosRankSum=-1.612;VQSLOD=2.8126;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:36.09:0,36,409	0/0:7,0:7:21.06:0,21,245	0/0:14,0:13:20.75:0,21,243	0/0:10,0:10:21.06:0,21,241	0/0:16,0:16:42.06:0,42,463	0/0:30,0:30:84.24:0,84,979	0/0:7,0:7:15.04:0,15,175	1/1:5,32:37:99:1542,99,0	0/0:8,0:8:21.06:0,21,245	0/0:27,0:27:78.22:0,78,901	0/0:15,0:15:42.11:0,42,479	0/0:15,0:15:36.08:0,36,407	0/0:13,0:13:36.08:0,36,407	0/0:16,0:16:42.12:0,42,489	1/1:0,22:22:63.22:1034,63,0	0/0:14,0:14:39.10:0,39,443	1/1:1,19:20:51.17:835,51,0	0/0:7,0:7:21.06:0,21,245	0/0:20,0:20:54.16:0,54,629	0/0:18,0:18:48.13:0,48,559	0/0:7,0:7:6:0,6,70	0/0:8,0:8:21.05:0,21,245	0/0:18,0:18:48.14:0,48,559	0/0:13,0:13:36.10:0,36,418	0/0:16,0:16:48.10:0,48,544	0/0:28,0:28:78.19:0,78,886	0/0:26,0:26:75.20:0,75,862	0/0:2,0:2:6.02:0,6,70
chr10	26500356	.	CT	C	2213.28	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.888;DP=566;FS=1.036;HRun=3;HaplotypeScore=53.9353;InbreedingCoeff=0.9984;MQ=80.25;MQ0=0;MQRankSum=1.492;QD=34.58;ReadPosRankSum=-2.596;VQSLOD=2.9840;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:63.19:0,63,918	0/0:13,0:13:39.13:0,39,585	0/0:16,0:16:39.13:0,39,564	0/0:12,0:12:35.70:0,36,481	0/0:34,0:34:99:0,99,1436	0/0:20,0:20:60.20:0,60,899	0/0:7,0:7:21.07:0,21,315	1/1:1,34:35:99:1266,102,0	0/0:14,0:14:42.13:0,42,611	0/0:21,0:21:63.21:0,63,940	0/0:25,0:25:72.24:0,72,1079	0/0:18,0:18:54.18:0,54,809	0/0:20,0:20:60.13:0,60,833	0/0:25,0:25:72.24:0,72,1077	1/1:0,16:16:45.15:584,45,0	0/0:18,0:18:54.16:0,54,769	1/1:0,13:13:39.13:506,39,0	0/0:15,0:15:45.11:0,45,649	0/0:16,0:16:48.16:0,48,720	0/0:38,0:38:99:0,111,1602	0/0:19,0:19:54.11:0,54,759	0/0:16,0:16:48.15:0,48,684	0/0:24,0:24:72.21:0,72,1022	0/0:16,0:16:48.15:0,48,699	0/0:17,0:17:51.11:0,51,682	0/0:22,0:22:66.22:0,66,988	0/0:33,0:33:99:0,99,1483	0/0:22,0:22:66.22:0,66,989
chr10	26500569	.	T	TG	702.63	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=2.511;DP=400;FS=0.000;HRun=2;HaplotypeScore=83.5351;InbreedingCoeff=0.8992;MQ=80.74;MQ0=6;MQRankSum=-2.729;QD=24.23;ReadPosRankSum=0.955;VQSLOD=3.4126;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:4:9.03:0,9,120	0/0:9,0:9:27.09:0,27,353	0/0:29,0:15:36.15:0,36,375	0/0:24,0:15:20.23:0,20,225	0/0:21,0:21:51.16:0,51,670	0/0:16,0:16:42.14:0,42,574	0/0:11,0:11:30.10:0,30,396	1/1:0,14:14:39.11:505,39,0	0/0:6,0:6:15.05:0,15,205	0/0:23,0:23:64.87:0,65,786	0/0:16,0:16:42.14:0,42,554	0/0:15,0:15:33.10:0,33,442	0/0:14,0:14:36.10:0,36,456	0/0:12,0:12:33.11:0,33,444	1/1:0,11:11:24.05:241,24,0	0/0:13,0:13:36.11:0,36,471	1/1:0,4:4:8.82:93,9,0	0/0:5,0:5:15.01:0,15,182	0/0:17,0:17:51.15:0,51,664	0/0:21,0:21:51.15:0,51,677	0/0:4,0:4:6.02:0,6,83	0/0:12,0:12:33.11:0,33,439	0/0:17,0:16:45.15:0,45,606	0/0:6,0:6:12.04:0,12,162	0/0:18,0:18:42.14:0,42,574	0/0:15,0:14:42.14:0,42,573	0/0:21,0:21:63.18:0,63,808	0/0:20,0:20:51.03:0,51,576
chr10	26500571	.	CTTTT	C	6294.24	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-3.768;DP=396;FS=16.401;HRun=17;HaplotypeScore=82.8165;InbreedingCoeff=0.6788;MQ=77.99;MQ0=6;MQRankSum=-2.391;QD=18.51;ReadPosRankSum=4.400;VQSLOD=1.5061;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,1:4:5.83:61,6,0	1/1:4,3:9:11.82:122,12,0	0/0:28,0:13:24.06:0,24,293	0/0:27,0:14:11.78:0,12,155	1/1:4,14:20:33.93:406,34,0	1/1:3,10:16:32.83:374,33,0	1/1:7,4:11:11.74:141,12,0	1/1:9,0:13:11.77:93,12,0	1/1:2,4:6:8.99:114,9,0	1/1:5,16:23:37.06:546,37,0	1/1:6,9:17:16.95:180,17,0	1/1:6,8:15:16.60:204,17,0	1/1:9,5:14:3.71:244,4,0	1/1:7,4:12:17.67:212,18,0	1/1:4,0:11:20.88:162,21,0	1/1:5,6:12:17.84:213,18,0	1/1:2,0:4:5.55:46,6,0	1/1:0,4:5:13.28:155,13,0	1/1:9,9:18:29.87:335,30,0	1/1:4,15:20:35.60:442,36,0	1/1:1,3:4:5.31:74,5,0	1/1:2,9:12:20.64:251,21,0	1/1:5,11:16:35.93:429,36,0	1/1:1,5:6:8.93:114,9,0	1/1:8,10:19:22.85:271,23,0	1/1:5,10:15:24.94:293,25,0	1/1:4,15:23:44.30:508,44,0	1/1:2,11:13:24.01:304,24,0
chr10	26500585	.	TTTTG	T	2157.50	PASS	AB=0.977;AC=31;AF=0.554;AN=56;BaseQRankSum=8.237;DP=373;FS=27.236;HRun=0;HaplotypeScore=88.5283;InbreedingCoeff=-0.3877;MQ=74.12;MQ0=7;MQRankSum=-1.894;QD=7.26;ReadPosRankSum=11.552;VQSLOD=-0.5629;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:5,0:5:12.64:13,0,52	0/1:8,0:8:23.02:23,0,58	0/0:36,0:15:19.89:0,20,277	0/0:28,0:13:14.30:0,14,193	0/1:21,0:21:99:144,0,134	1/1:13,0:13:11.33:133,11,0	0/1:8,1:9:77.43:77,0,88	0/0:12,0:12:13.30:0,13,172	0/1:8,0:8:25.72:26,0,68	0/1:22,0:22:77.25:151,0,77	0/1:18,0:18:36.67:37,0,167	0/1:13,1:14:45.64:131,0,46	1/1:9,2:11:1.71:200,2,0	0/1:8,2:10:17.99:128,0,18	0/1:9,0:9:20.51:24,0,21	1/1:7,0:7:15.47:91,15,0	0/1:3,0:3:5.89:6,0,10	1/1:5,0:5:13.40:91,13,0	0/1:13,0:13:10.38:106,0,10	0/1:20,0:20:77.41:134,0,77	1/1:3,0:3:5.54:25,6,0	0/1:11,0:11:18.12:95,0,18	0/1:16,2:17:37.69:213,0,38	0/1:6,0:6:13.22:37,0,13	0/1:16,0:16:62.21:70,0,62	0/1:15,0:14:73.60:74,0,81	0/1:20,0:20:0.54:203,0,1	1/1:12,0:12:1.74:87,2,0
chr10	26500685	.	C	CA	1618.14	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=10.659;DP=556;FS=3.580;HRun=4;HaplotypeScore=58.8959;InbreedingCoeff=0.9900;MQ=79.03;MQ0=0;MQRankSum=-4.503;QD=32.36;ReadPosRankSum=-3.324;VQSLOD=2.7787;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:48.10:0,48,523	0/0:6,0:6:15.04:0,15,170	0/0:26,0:26:63.08:0,63,685	0/0:8,0:8:18.05:0,18,204	0/0:46,0:46:99:0,123,1394	0/0:34,0:34:72.14:0,72,1062	0/0:12,0:12:33.08:0,33,365	1/1:1,24:25:72.19:927,72,0	0/0:14,0:14:42.12:0,42,476	0/0:20,0:20:54.15:0,54,612	0/0:27,0:27:78.22:0,78,885	0/0:12,0:12:36.09:0,36,399	0/0:21,0:21:51.13:0,51,568	0/0:18,0:18:48.14:0,48,545	1/1:1,13:14:39.13:515,39,0	0/0:17,0:17:51.15:0,51,579	1/1:2,9:11:24.96:318,25,0	0/0:9,0:9:27.08:0,27,306	0/0:25,0:25:57.16:0,57,646	0/0:35,0:35:93.26:0,93,1055	0/0:14,0:14:39.10:0,39,432	0/0:14,0:14:42.12:0,42,476	0/0:32,0:32:93.27:0,93,1055	0/0:21,0:21:63.18:0,63,715	0/0:23,0:23:66.19:0,66,749	0/0:25,0:25:72.20:0,72,816	0/0:21,0:20:57.16:0,57,646	0/0:9,0:9:27.08:0,27,306
chr10	26500800	.	A	ATCTGTCTG	2369.41	PASS	AB=1.000;AC=8;AF=0.143;AN=56;BaseQRankSum=-3.597;DP=594;FS=0.000;HRun=0;HaplotypeScore=153.4591;InbreedingCoeff=0.6186;MQ=68.99;MQ0=1;MQRankSum=-6.360;QD=20.43;ReadPosRankSum=-5.677;VQSLOD=0.9162;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:20,0:20:59.50:59,0,659	0/0:7,0:7:21.03:0,21,390	0/0:37,0:37:64.34:0,64,1413	0/1:16,0:13:2.72:3,0,495	0/0:37,0:37:90.26:0,90,2168	0/0:18,0:18:39.09:0,39,856	0/0:9,0:9:24.08:0,24,615	1/1:28,25:56:99:2230,114,0	0/0:18,0:18:42.14:0,42,1078	0/0:23,0:23:48.15:0,48,1161	0/0:24,0:24:60.19:0,60,1522	0/0:15,0:15:45.11:0,45,1012	0/0:13,0:13:27.09:0,27,704	0/0:20,0:20:45.13:0,45,1044	1/1:5,9:15:3.01:126,3,0	0/0:16,0:16:42.12:0,42,967	1/1:4,4:9:3.01:81,3,0	0/0:18,0:18:41.54:0,42,1159	0/0:15,0:15:39.08:0,39,708	0/0:27,0:27:69.22:0,69,1683	0/0:30,0:30:81.20:0,81,1848	0/0:17,0:17:39.11:0,39,917	0/0:25,0:25:57.16:0,57,1389	0/0:11,0:11:24.08:0,24,621	0/0:25,0:25:54.16:0,54,1257	0/0:25,0:25:66.22:0,66,1675	0/0:26,0:26:57.15:0,57,1439	0/0:22,0:22:51.65:0,52,1341
chr10	26501131	.	CA	C	2049.27	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.766;DP=558;FS=9.432;HRun=5;HaplotypeScore=64.0112;InbreedingCoeff=0.9713;MQ=73.75;MQ0=0;MQRankSum=-2.172;QD=28.46;ReadPosRankSum=-2.269;VQSLOD=2.5363;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:48.07:0,48,586	0/0:5,0:5:15.05:0,15,204	0/0:13,0:14:26.10:0,26,328	0/0:21,0:20:10.12:0,10,375	0/0:33,0:33:90.29:0,90,1215	0/0:23,0:23:66.22:0,66,903	0/0:17,0:17:42.10:0,42,527	1/1:2,33:35:99:1103,99,0	0/0:15,0:15:36.12:0,36,492	0/0:21,0:21:60.19:0,60,804	0/0:25,0:25:72.23:0,72,969	0/0:32,0:32:87.28:0,87,1175	0/0:24,0:24:69.23:0,69,936	0/0:21,0:21:57.16:0,57,747	1/1:1,15:16:42.12:476,42,0	0/0:19,0:19:57.19:0,57,779	1/1:0,21:21:54.15:612,54,0	0/0:12,0:12:36.08:0,36,471	0/0:20,0:20:54.13:0,54,691	0/0:23,0:23:63.20:0,63,848	0/0:6,0:6:15.05:0,15,205	0/0:28,0:28:84.24:0,84,1102	0/0:19,0:19:54.18:0,54,739	0/0:11,0:11:30.09:0,30,394	0/0:19,0:19:57.17:0,57,751	0/0:29,0:29:84.28:0,84,1149	0/0:25,0:25:75.24:0,75,1011	0/0:8,0:8:24.08:0,24,328
chr10	26501765	.	CT	C	991.07	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=7.960;DP=650;FS=0.689;HRun=2;HaplotypeScore=60.6664;InbreedingCoeff=0.9452;MQ=59.51;MQ0=5;MQRankSum=-1.841;QD=15.98;ReadPosRankSum=-0.660;VQSLOD=3.2908;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,102,1526	0/0:11,0:11:33.11:0,33,494	0/0:16,0:9:24.06:0,24,327	0/0:13,0:7:7.34:0,7,91	0/0:28,0:27:69.23:0,69,1031	0/0:36,0:36:99:0,105,1555	0/0:18,0:18:54.18:0,54,808	1/1:0,8:5:12.04:156,12,0	0/0:20,0:20:60.20:0,60,898	0/0:32,0:31:90.30:0,90,1347	0/0:22,0:22:54.17:0,54,784	0/0:21,0:20:60.20:0,60,898	0/0:34,0:34:99:0,102,1484	0/0:25,0:25:75.25:0,75,1106	1/1:2,29:28:29.88:566,30,0	0/0:28,0:28:81.27:0,81,1196	1/1:1,22:19:13.11:405,13,0	0/0:29,0:28:84.28:0,84,1257	0/0:23,0:17:48.16:0,48,720	0/0:26,0:25:66.20:0,66,948	0/0:30,0:29:84.27:0,84,1239	0/0:29,0:29:78.26:0,78,1169	0/0:17,0:17:45.15:0,45,672	0/0:27,0:27:78.26:0,78,1152	0/0:23,0:22:57.18:0,57,836	0/0:20,0:20:57.19:0,57,854	0/0:19,0:19:57.19:0,57,854	0/0:5,0:5:15.03:0,15,204
chr10	26502113	.	T	TG	364.18	PASS	AB=0.909;AC=5;AF=0.093;AN=54;BaseQRankSum=5.478;DP=649;FS=11.034;HRun=0;HaplotypeScore=60.8101;InbreedingCoeff=0.6577;MQ=49.77;MQ0=13;MQRankSum=-5.518;QD=8.28;ReadPosRankSum=-2.862;VQSLOD=1.6715;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:36:54.15:0,54,705	0/0:13,0:13:27.08:0,27,362	0/0:7,0:2:6.02:0,6,81	0/0:9,0:3:2.19:0,2,78	0/0:33,0:33:66.06:0,66,854	0/0:32,0:32:63.15:0,63,827	0/1:18,2:20:5.41:5,0,419	1/1:4,7:5:15.04:203,15,0	0/0:31,0:28:57.11:0,57,738	0/0:35,0:34:99:0,102,1336	0/0:27,0:27:54.18:0,54,754	0/0:22,1:23:9.75:0,10,626	0/0:23,0:23:50.93:0,51,669	0/0:23,0:23:51.17:0,51,712	1/1:1,12:11:20.98:275,21,0	0/0:25,0:24:54.06:0,54,676	./.	0/0:27,0:20:30.10:0,30,419	0/0:19,0:9:27.04:0,27,341	0/0:28,0:27:75.24:0,75,1032	0/0:15,0:15:24.07:0,24,319	0/0:30,0:30:60.19:0,60,821	0/0:38,0:37:75.20:0,75,996	0/0:27,0:12:14.10:0,14,346	0/0:25,0:24:63.17:0,63,844	0/0:28,0:27:78.26:0,78,1086	0/0:36,0:36:75.12:0,75,957	0/0:7,0:4:6.02:0,6,84
chr10	26502584	.	CT	C	2553.68	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=13.040;DP=700;FS=1.459;HRun=3;HaplotypeScore=72.1264;InbreedingCoeff=0.9743;MQ=57.64;MQ0=16;MQRankSum=-1.907;QD=28.69;ReadPosRankSum=0.037;VQSLOD=2.8441;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:81.23:0,81,1140	0/0:12,0:12:36.12:0,36,517	0/0:26,0:12:30.08:0,30,399	0/0:31,0:14:15.49:0,15,360	0/0:32,0:32:72.23:0,72,1009	0/0:30,0:30:90.27:0,90,1271	0/0:18,0:18:45.15:0,45,646	1/1:7,24:31:78.20:897,78,0	0/0:14,0:14:33.07:0,33,452	0/0:31,0:31:93.31:0,93,1338	0/0:32,0:32:84.28:0,84,1195	0/0:19,0:19:48.16:0,48,681	0/0:25,0:25:75.22:0,75,1041	0/0:38,0:38:99:0,111,1564	1/1:2,31:33:87.27:1043,87,0	0/0:26,0:26:78.26:0,78,1123	1/1:1,24:25:63.19:756,63,0	0/0:19,0:16:45.15:0,45,645	0/0:18,0:15:45.15:0,45,643	0/0:31,0:31:93.31:0,93,1323	0/0:22,0:22:63.21:0,63,907	0/0:26,0:25:69.21:0,69,955	0/0:22,0:22:60.20:0,60,853	0/0:18,0:18:48.16:0,48,687	0/0:27,0:27:60.12:0,60,800	0/0:29,0:29:84.27:0,84,1179	0/0:32,0:32:96.31:0,96,1355	0/0:3,0:3:9.03:0,9,130
chr10	26502867	.	G	GCC	554.77	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=6.658;DP=522;FS=5.093;HRun=6;HaplotypeScore=65.7708;InbreedingCoeff=0.8409;MQ=61.09;MQ0=1;MQRankSum=-5.847;QD=17.90;ReadPosRankSum=0.630;VQSLOD=0.4963;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:84.23:0,84,1001	0/0:9,0:9:24.06:0,24,281	0/0:16,0:14:17.70:0,18,254	0/0:9,0:8:21.06:0,21,256	0/0:36,0:36:93.23:0,93,1095	0/0:23,0:23:63.14:0,63,720	0/0:19,0:19:45.10:0,45,533	0/1:7,0:6:0:0,0,0	0/0:18,0:18:45.12:0,45,537	0/0:23,0:23:66.20:0,66,805	0/0:20,0:19:51.15:0,51,620	0/0:21,0:21:57.18:0,57,695	0/0:10,0:11:29.82:0,30,341	0/0:19,0:19:51.16:0,51,621	1/1:1,18:16:36.12:608,36,0	0/0:12,0:12:33.09:0,33,390	1/1:1,0:4:6.01:58,6,0	0/0:19,0:19:13.03:0,13,447	0/0:16,0:16:42.13:0,42,511	0/0:21,0:21:60.17:0,60,720	0/0:17,0:17:42.12:0,42,500	0/0:18,0:18:45.14:0,45,549	0/0:22,0:21:57.15:0,57,671	0/0:33,0:33:87.26:0,87,1061	0/0:19,0:18:57.18:0,57,695	0/0:22,0:22:66.19:0,66,786	0/0:29,0:29:81.25:0,81,988	0/0:3,0:3:9.03:0,9,110
chr10	26504258	.	CA	C	1421.52	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=11.719;DP=545;FS=1.758;HRun=8;HaplotypeScore=66.8512;InbreedingCoeff=0.9855;MQ=65.81;MQ0=0;MQRankSum=-0.222;QD=20.60;ReadPosRankSum=-0.541;VQSLOD=3.3719;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:37.10:0,37,467	0/0:5,0:5:15.05:0,15,181	0/0:12,0:11:24.04:0,24,258	0/0:14,0:14:22.18:0,22,238	0/0:38,0:38:99:0,114,1375	0/0:22,0:22:66.20:0,66,797	0/0:11,0:11:33.10:0,33,399	1/1:2,23:24:54.08:521,54,0	0/0:22,0:22:66.20:0,66,795	0/0:25,0:25:66.20:0,66,797	0/0:38,0:38:99:0,111,1341	0/0:19,0:19:45.14:0,45,544	0/0:14,0:14:36.11:0,36,435	0/0:25,0:25:72.18:0,72,853	1/1:2,15:17:45.07:435,45,0	0/0:13,0:13:36.11:0,36,435	1/1:2,24:27:63.10:608,63,0	0/0:11,0:11:30.05:0,30,336	0/0:17,0:16:45.14:0,45,544	0/0:31,0:31:90.28:0,90,1087	0/0:16,0:16:42.09:0,42,491	0/0:20,0:20:60.18:0,60,725	0/0:24,0:24:69.20:0,69,822	0/0:11,0:11:22.51:0,23,287	0/0:20,0:20:51.16:0,51,616	0/0:19,0:19:51.15:0,51,607	0/0:26,0:26:78.21:0,78,919	0/0:5,0:5:15.05:0,15,181
chr10	26504578	.	GA	G	1806.32	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.726;DP=548;FS=3.029;HRun=7;HaplotypeScore=52.4226;InbreedingCoeff=0.9384;MQ=63.80;MQ0=0;MQRankSum=0.647;QD=24.74;ReadPosRankSum=-1.413;VQSLOD=3.3688;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:25:69.22:0,69,868	0/0:12,0:12:30.10:0,30,377	0/0:15,0:13:36.11:0,36,441	0/0:4,0:2:3.01:0,3,38	0/0:41,0:41:99:0,108,1358	0/0:18,0:18:51.16:0,51,642	0/0:17,0:17:48.14:0,48,590	1/1:3,31:34:93.18:939,93,0	0/0:15,0:15:45.14:0,45,566	0/0:29,0:28:75.22:0,75,929	0/0:30,0:30:84.24:0,84,1030	0/0:10,0:10:27.09:0,27,340	0/0:20,0:20:57.18:0,57,717	0/0:21,0:21:60.17:0,60,731	1/1:0,15:15:45.10:459,45,0	0/0:16,0:16:45.14:0,45,566	1/1:4,20:24:54.12:551,54,0	0/0:10,0:10:27.09:0,27,340	0/0:17,0:17:42.13:0,42,528	0/0:24,0:24:72.23:0,72,906	0/0:8,0:8:21.07:0,21,264	0/0:20,0:20:60.19:0,60,753	0/0:23,0:23:66.21:0,66,829	0/0:15,0:15:39.12:0,39,491	0/0:17,0:17:48.15:0,48,601	0/0:25,0:25:72.23:0,72,906	0/0:27,0:27:78.25:0,78,979	0/0:15,0:15:39.12:0,39,490
chr10	26504839	.	T	TA	1058.69	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-3.287;DP=441;FS=1.478;HRun=7;HaplotypeScore=87.1721;InbreedingCoeff=0.7845;MQ=70.52;MQ0=1;MQRankSum=-2.746;QD=25.21;ReadPosRankSum=-2.505;VQSLOD=2.9263;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:17.96:0,18,162	0/0:13,0:13:20.48:0,20,190	0/0:22,0:17:34.62:0,35,300	0/0:7,0:3:6.01:0,6,57	0/0:37,0:37:75.11:0,75,723	0/0:15,0:15:11.93:0,12,97	0/0:10,0:10:27.03:0,27,255	1/1:7,27:34:81.25:979,81,0	0/0:25,0:25:33.04:0,33,317	0/0:9,0:9:21.03:0,21,203	0/0:12,0:12:33.05:0,33,318	0/0:10,0:10:11.95:0,12,99	0/0:16,0:16:14.64:0,15,133	0/0:11,0:11:8.95:0,9,75	0/0:13,0:13:30.04:0,30,287	0/0:16,0:16:21.02:0,21,203	1/1:2,6:8:17.99:199,18,0	0/0:12,0:12:33.05:0,33,318	0/0:14,0:14:38.58:0,39,393	0/0:18,0:18:48.08:0,48,463	0/0:4,0:4:3:0,3,29	0/0:9,0:9:24.02:0,24,226	0/0:13,0:13:14.97:0,15,135	0/0:7,0:7:12.01:0,12,116	0/0:9,0:9:18.03:0,18,173	0/0:26,0:26:66.05:0,66,627	0/0:23,0:23:63.08:0,63,602	0/0:22,0:22:60.57:0,61,580
chr10	26504859	.	A	ATCT	415.38	PASS	AB=0.870;AC=13;AF=0.241;AN=54;BaseQRankSum=-1.591;DP=460;FS=0.815;HRun=0;HaplotypeScore=114.4740;InbreedingCoeff=0.0284;MQ=56.80;MQ0=7;MQRankSum=-3.760;QD=2.56;ReadPosRankSum=-3.266;VQSLOD=1.4997;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:8.56:0,9,116	0/0:12,0:12:20.41:0,20,287	0/0:13,0:9:21.07:0,21,308	./.	0/0:37,0:37:58.16:0,58,921	1/1:15,0:15:1.41:3,1,0	0/0:14,0:13:30.10:0,30,458	0/0:38,0:38:99:0,108,1546	0/1:19,0:19:15.87:16,0,227	0/1:17,0:16:99:236,0,317	0/1:18,0:18:99:148,0,303	1/1:12,0:12:2.36:5,2,0	0/0:19,0:19:0.83:0,1,10	0/0:13,0:13:1.83:0,2,12	0/0:10,0:10:21.07:0,21,315	0/1:2,0:11:33.10:33,0,38	0/0:11,0:11:12.72:0,13,303	0/0:13,0:13:35.97:0,36,496	0/0:14,0:14:35.06:0,35,453	0/0:24,0:24:40.57:0,41,641	1/1:2,0:2:2.04:6,2,0	0/1:7,3:10:80.80:81,0,248	0/0:13,0:13:7.49:0,7,112	0/0:4,0:4:9.03:0,9,137	0/0:11,0:11:1.60:0,2,43	0/1:31,0:29:6.45:6,0,856	0/1:19,8:27:10.40:10,0,765	0/0:20,0:18:49.39:0,49,698
chr10	26504863	.	A	ATCTATCT	8175.14	PASS	AB=0.948;AC=36;AF=0.692;AN=52;BaseQRankSum=-5.852;DP=472;FS=0.510;HRun=0;HaplotypeScore=108.5290;InbreedingCoeff=0.1551;MQ=54.74;MQ0=9;MQRankSum=0.937;QD=20.64;ReadPosRankSum=5.017;VQSLOD=3.9290;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:8,18:27:74.81:125,0,75	1/1:1,11:12:11.91:176,12,0	0/0:11,0:7:1.22:0,1,127	./.	1/1:2,34:37:26.67:394,27,0	1/1:0,16:20:9.03:349,9,0	1/1:15,0:14:33.07:439,33,0	0/0:38,0:35:84.28:0,84,1265	0/1:19,0:19:89.15:89,0,113	0/1:18,0:17:84.90:444,0,85	0/1:17,0:17:99:129,0,206	1/1:1,11:14:15.05:583,15,0	1/1:0,16:18:15.01:486,15,0	1/1:1,13:15:8.99:253,9,0	0/0:9,0:9:18.06:0,18,275	0/1:11,0:11:38.21:91,0,38	0/0:10,0:10:8.35:0,8,239	0/1:13,0:13:37.06:469,0,37	1/1:0,13:14:42.14:659,42,0	1/1:2,22:26:23.89:452,24,0	./.	0/1:11,0:11:70.65:147,0,71	1/1:2,11:15:9.03:350,9,0	1/1:5,0:5:8.99:104,9,0	1/1:1,10:11:9.03:350,9,0	0/1:31,0:29:99:858,0,238	1/1:26,0:26:21.21:601,21,0	1/1:21,0:19:6.22:629,6,0
chr10	26504867	.	A	ATCT	5394.44	PASS	AB=0.965;AC=25;AF=0.463;AN=54;BaseQRankSum=-0.183;DP=470;FS=0.456;HRun=0;HaplotypeScore=94.4318;InbreedingCoeff=-0.4844;MQ=54.58;MQ0=11;MQRankSum=0.272;QD=13.55;ReadPosRankSum=6.361;VQSLOD=4.1379;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:27:50.08:50,0,110	0/1:11,0:11:37.19:75,0,37	0/0:9,0:5:1.22:0,1,127	./.	0/1:36,0:36:99:196,0,186	0/1:24,0:24:53.90:122,0,54	1/1:16,0:15:4.78:369,5,0	0/0:37,0:32:84.28:0,84,1268	0/1:7,11:18:89.14:89,0,119	0/1:20,0:19:99:350,0,230	0/1:10,6:17:99:126,0,304	1/1:13,1:14:15.05:235,15,0	0/1:19,0:19:34.09:172,0,34	0/1:15,0:15:81.68:82,0,83	0/0:8,0:8:18.06:0,18,271	0/1:9,0:9:39.04:39,0,40	0/0:9,0:9:6.80:0,7,239	0/1:14,0:14:66.63:378,0,67	0/1:14,0:14:0.49:507,0,0	0/1:23,0:23:62.37:196,0,62	0/0:3,0:3:6.02:0,6,87	0/1:10,0:10:99:145,0,132	0/1:15,0:15:33.79:129,0,34	0/1:5,0:5:33.85:92,0,34	0/1:12,0:12:31.54:128,0,32	0/1:32,0:30:99:715,0,358	0/1:26,0:26:18.08:575,0,18	1/1:21,0:19:2.11:624,2,0
chr10	26504870	.	TA	T	3608.55	PASS	AB=0.777;AC=14;AF=0.259;AN=54;BaseQRankSum=-0.998;DP=463;FS=2.032;HRun=1;HaplotypeScore=87.8987;InbreedingCoeff=-0.3982;MQ=54.23;MQ0=11;MQRankSum=3.424;QD=13.88;ReadPosRankSum=1.573;VQSLOD=3.1046;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:10.39:0,10,132	0/1:10,0:10:29.08:29,0,42	0/0:8,0:4:1.22:0,1,127	./.	0/1:36,0:36:98.94:99,0,282	0/0:23,0:23:17.49:0,17,192	0/1:6,11:16:76.30:358,0,76	0/0:36,0:31:90.30:0,90,1338	0/1:14,4:18:41.32:41,0,117	0/1:12,9:20:99:276,0,365	0/1:15,1:16:77.96:78,0,325	0/0:12,0:12:8.82:0,9,25	0/0:18,0:18:13.29:0,13,112	0/0:14,0:14:9.65:0,10,102	0/0:9,0:9:21.07:0,21,318	0/0:9,0:9:5.23:0,5,51	0/0:11,0:11:27.07:0,27,387	0/1:5,8:14:76.09:326,0,76	0/1:12,0:12:99:306,0,108	0/1:21,0:21:59.32:59,0,80	0/0:3,0:3:6.02:0,6,92	0/1:6,4:10:99:147,0,149	0/0:16,0:16:14.21:0,14,147	0/1:2,3:5:31.95:92,0,32	0/0:11,0:11:8.46:0,8,60	0/1:15,18:31:99:656,0,454	0/1:11,15:26:83.62:572,0,84	0/1:6,15:19:99:568,0,109
chr10	26506544	.	GAT	G	2836.67	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=10.082;DP=573;FS=0.000;HRun=0;HaplotypeScore=64.5627;InbreedingCoeff=0.9630;MQ=79.92;MQ0=0;MQRankSum=0.022;QD=36.84;ReadPosRankSum=-2.112;VQSLOD=4.8395;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:45.15:0,45,868	0/0:2,0:2:6.02:0,6,116	0/0:12,0:12:36.07:0,36,599	0/0:17,0:17:45.05:0,45,748	0/0:34,0:34:99:0,99,1824	0/0:22,0:22:66.18:0,66,1163	0/0:18,0:18:54.17:0,54,990	1/1:0,37:37:99:1609,111,0	0/0:16,0:16:48.15:0,48,882	0/0:30,0:30:90.28:0,90,1615	0/0:28,0:28:81.26:0,81,1511	0/0:14,0:14:42.13:0,42,760	0/0:20,0:20:60.13:0,60,984	0/0:23,0:23:69.24:0,69,1323	1/1:1,22:23:56.74:872,57,0	0/0:21,0:21:63.20:0,63,1158	1/1:2,15:17:33.11:498,33,0	0/0:13,0:12:39.06:0,39,667	0/0:20,0:20:60.17:0,60,1051	0/0:30,0:30:90.25:0,90,1596	0/0:9,0:9:27.05:0,27,444	0/0:22,0:22:66.21:0,66,1241	0/0:30,0:30:90.29:0,90,1686	0/0:10,0:10:30.10:0,30,569	0/0:15,0:15:45.13:0,45,793	0/0:27,0:27:81.27:0,81,1534	0/0:35,0:34:99:0,102,1925	0/0:13,0:13:39.13:0,39,752
chr10	26506870	.	T	TC	19652.43	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-11.468;DP=548;FS=1.401;HRun=0;HaplotypeScore=46.5960;InbreedingCoeff=0.9822;MQ=89.41;MQ0=0;MQRankSum=-5.993;QD=43.00;ReadPosRankSum=7.951;VQSLOD=3.7883;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,10:10:24.08:382,24,0	1/1:0,6:6:18.06:287,18,0	0/0:23,0:23:66.18:0,66,886	0/0:17,0:17:45.43:0,45,572	1/1:0,38:38:99:1689,108,0	1/1:0,29:28:78.27:1244,78,0	1/1:0,11:11:33.11:527,33,0	0/0:26,0:26:75.23:0,75,1006	1/1:0,16:16:36.12:574,36,0	1/1:0,24:24:69.21:1075,69,0	1/1:0,23:23:66.22:1037,66,0	1/1:0,19:19:48.16:766,48,0	1/1:1,20:21:48.16:763,48,0	1/1:1,19:20:48.15:740,48,0	0/0:18,0:18:54.17:0,54,733	1/1:0,19:19:51.17:813,51,0	0/0:7,0:7:21.07:0,21,293	1/1:0,10:10:30.10:478,30,0	1/1:0,19:19:54.17:839,54,0	1/1:1,32:33:99:1549,99,0	1/1:0,12:12:36.12:574,36,0	1/1:1,26:27:75.17:1149,75,0	1/1:0,25:25:75.26:1192,75,0	1/1:0,4:4:9.03:144,9,0	1/1:0,23:23:63.21:1005,63,0	1/1:0,24:24:72.23:1113,72,0	1/1:0,35:35:87.30:1378,87,0	1/1:0,8:8:21.07:335,21,0
chr10	26507119	.	T	TG	2294.95	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.353;DP=492;FS=4.787;HRun=4;HaplotypeScore=50.6401;InbreedingCoeff=0.9931;MQ=85.52;MQ0=0;MQRankSum=-1.193;QD=35.31;ReadPosRankSum=-1.108;VQSLOD=3.6230;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:51.13:0,51,569	0/0:10,0:10:30.09:0,30,340	0/0:20,0:20:47.87:0,48,522	0/0:12,0:12:36.10:0,36,408	0/0:26,0:26:66.18:0,66,748	0/0:19,0:19:57.16:0,57,646	0/0:9,0:9:24.07:0,24,272	1/1:3,30:33:90.28:1207,90,0	0/0:18,0:18:54.13:0,54,600	0/0:24,0:24:63.18:0,63,715	0/0:23,0:23:63.18:0,63,714	0/0:16,0:16:48.14:0,48,544	0/0:15,0:15:39.10:0,39,436	0/0:17,0:17:51.15:0,51,578	1/1:2,13:15:39.13:534,39,0	0/0:17,0:17:48.14:0,48,544	1/1:0,17:17:51.17:697,51,0	0/0:11,0:11:33.09:0,33,374	0/0:24,0:24:60.16:0,60,673	0/0:28,0:28:75.21:0,75,849	0/0:7,0:7:18.05:0,18,204	0/0:13,0:13:39.11:0,39,442	0/0:15,0:15:42.12:0,42,476	0/0:9,0:9:21.06:0,21,238	0/0:18,0:18:48.14:0,48,545	0/0:18,0:18:45.13:0,45,510	0/0:33,0:33:90.24:0,90,1010	0/0:7,0:7:21.06:0,21,238
chr10	26507293	.	C	CT	320.58	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-5.655;DP=425;FS=0.000;HRun=6;HaplotypeScore=40.4749;InbreedingCoeff=0.9309;MQ=81.44;MQ0=0;MQRankSum=-1.408;QD=24.66;ReadPosRankSum=0.391;VQSLOD=2.8097;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:30.07:0,30,306	0/0:4,0:4:12.03:0,12,122	0/0:14,0:14:30.06:0,30,305	0/0:9,0:9:11.51:0,12,101	0/0:31,0:31:84.18:0,84,857	0/0:13,0:13:39.09:0,39,398	0/0:10,0:10:24.05:0,24,245	0/0:22,0:22:51.08:0,51,504	0/0:12,0:12:36.07:0,36,361	0/0:15,0:15:42.09:0,42,424	0/0:15,0:15:45.10:0,45,459	0/0:12,0:12:30.06:0,30,306	0/0:14,0:14:42.10:0,42,428	0/0:12,0:12:36.08:0,36,367	1/1:0,13:13:33.11:415,33,0	0/0:13,0:13:39.09:0,39,398	0/0:8,0:8:24.05:0,24,245	0/0:17,0:17:45.10:0,45,459	0/0:21,0:21:48.09:0,48,484	0/0:29,0:29:84.14:0,84,835	0/0:9,0:9:27.06:0,27,275	0/0:10,0:10:30.07:0,30,306	0/0:19,0:19:51.11:0,51,520	0/0:15,0:15:42.10:0,42,428	0/0:22,0:22:57.13:0,57,582	0/0:16,0:16:42.09:0,42,423	0/0:29,0:29:87.20:0,87,887	0/0:9,0:9:27.06:0,27,275
chr10	26508288	.	T	TA	2811.05	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=4.420;DP=693;FS=1.374;HRun=4;HaplotypeScore=128.4333;InbreedingCoeff=0.9958;MQ=78.77;MQ0=1;MQRankSum=0.632;QD=32.31;ReadPosRankSum=-2.768;VQSLOD=1.6805;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,106,766	0/0:9,0:9:25.69:0,26,130	0/0:28,0:26:55.13:0,55,667	0/0:33,0:33:87.17:0,87,956	0/0:25,0:25:62.03:0,62,349	0/0:18,0:18:48.93:0,49,260	0/0:21,0:21:52.96:0,53,273	1/1:5,19:24:60.10:713,60,0	0/0:27,0:27:74.91:0,75,407	0/0:19,0:19:42.78:0,43,208	0/0:22,0:22:34.48:0,34,271	0/0:25,0:25:64.87:0,65,331	0/0:27,0:27:52.66:0,53,356	0/0:28,0:28:74.26:0,74,375	1/1:4,25:29:76.13:990,76,0	0/0:18,0:18:51.62:0,52,271	1/1:2,32:34:96.76:1251,97,0	0/0:26,0:26:72.12:0,72,391	0/0:23,0:23:33.25:0,33,266	0/0:25,0:25:42.69:0,43,348	0/0:36,0:36:97.89:0,98,514	0/0:20,0:20:57.37:0,57,310	0/0:22,0:22:57.61:0,58,322	0/0:20,0:20:31.99:0,32,263	0/0:20,0:20:45.69:0,46,238	0/0:27,0:27:68.15:0,68,345	0/0:26,0:26:74.86:0,75,396	0/0:6,0:6:17.33:0,17,93
chr10	26509092	.	G	GTT	1030.30	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=5.179;DP=625;FS=3.644;HRun=10;HaplotypeScore=82.5268;InbreedingCoeff=0.9980;MQ=64.72;MQ0=1;MQRankSum=-0.720;QD=12.41;ReadPosRankSum=-1.550;VQSLOD=1.6344;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:28:71.85:0,72,713	0/0:11,0:11:30.05:0,30,298	0/0:18,0:19:37.63:0,38,305	0/0:17,0:17:23.46:0,23,194	0/0:24,0:25:62.83:0,63,615	0/0:25,0:27:59.58:0,60,644	0/0:12,0:12:27.01:0,27,275	1/1:11,0:41:47.80:297,48,0	0/0:20,0:20:54.09:0,54,547	0/0:25,0:25:57.07:0,57,580	0/0:22,0:24:56.84:0,57,631	0/0:14,0:15:29.75:0,30,350	0/0:21,0:22:50.81:0,51,500	0/0:23,0:23:63.11:0,63,633	1/1:2,21:23:51.16:741,51,0	0/0:20,0:20:54.11:0,54,549	1/1:2,0:18:38.68:135,39,0	0/0:13,0:13:30.06:0,30,305	0/0:32,0:35:62.52:0,63,674	0/0:41,0:41:99:0,99,993	0/0:15,0:15:36.02:0,36,356	0/0:23,0:23:66.11:0,66,656	0/0:14,0:14:36.05:0,36,360	0/0:15,0:16:41.66:0,42,407	0/0:23,0:23:60.04:0,60,595	0/0:29,0:29:63.06:0,63,636	0/0:27,0:29:65.85:0,66,723	0/0:12,0:13:35.75:0,36,336
chr10	26509593	.	CAT	C	481.60	PASS	AB=0.692;AC=1;AF=0.019;AN=54;BaseQRankSum=-2.628;DP=343;FS=3.279;HRun=0;HaplotypeScore=87.8438;InbreedingCoeff=-0.0511;MQ=65.89;MQ0=2;MQRankSum=4.062;QD=13.38;ReadPosRankSum=-3.522;VQSLOD=2.6472;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:42.14:0,42,678	0/0:5,0:5:9.03:0,9,148	0/0:9,0:6:0.68:0,1,36	0/0:13,0:7:3:0,3,27	0/0:21,0:21:45.13:0,45,688	0/0:22,0:22:51.17:0,51,835	0/0:8,0:8:21.07:0,21,348	0/1:20,16:35:44.49:555,0,44	0/0:8,0:8:18.05:0,18,271	0/0:16,0:16:45.15:0,45,739	0/0:19,0:19:33.10:0,33,509	0/0:5,0:5:9.03:0,9,149	0/0:7,0:7:9.03:0,9,151	0/0:9,0:9:18.06:0,18,294	0/0:7,0:7:21.07:0,21,345	0/0:9,0:9:21.07:0,21,344	0/0:16,0:17:3.08:0,3,22	0/0:12,0:12:27.09:0,27,422	0/0:12,0:12:30.10:0,30,504	0/0:13,0:13:30.10:0,30,484	0/0:6,0:6:12.04:0,12,197	./.	0/0:8,0:8:18.06:0,18,290	0/0:3,0:3:6.02:0,6,97	0/0:20,0:20:51.16:0,51,827	0/0:15,0:15:36.11:0,36,580	0/0:13,0:13:33.09:0,33,497	0/0:7,0:7:15.05:0,15,251
chr10	26509617	.	T	TA	1268.19	PASS	AB=0.842;AC=43;AF=0.827;AN=52;BaseQRankSum=0.911;DP=277;FS=0.000;HRun=1;HaplotypeScore=87.0652;InbreedingCoeff=-0.0043;MQ=45.98;MQ0=10;MQRankSum=3.551;QD=4.93;ReadPosRankSum=1.528;VQSLOD=0.3964;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:16,3:19:26.73:124,27,0	1/1:2,1:4:7.10:27,7,0	0/0:7,0:2:3.90:0,4,43	./.	0/1:10,5:17:12.38:12,0,70	1/1:10,4:14:31.96:133,32,0	1/1:4,2:6:9.25:43,9,0	0/1:15,0:13:2.94:3,0,115	1/1:4,0:4:7.16:29,7,0	0/1:13,4:20:81.13:100,0,81	1/1:4,5:12:11.31:38,11,0	1/1:2,2:4:5.38:51,5,0	1/1:3,2:6:9.56:36,10,0	1/1:5,3:6:13.16:54,13,0	1/1:4,1:5:13.22:90,13,0	1/1:5,1:7:13:76,13,0	1/1:10,3:13:5.99:81,6,0	1/1:8,0:8:2.99:39,3,0	0/1:9,2:11:19.12:42,0,19	1/1:9,4:14:14.65:59,15,0	1/1:6,0:4:5.06:21,5,0	./.	1/1:5,2:9:5.55:19,6,0	1/1:5,0:5:4.26:13,4,0	0/1:9,2:12:19.40:65,0,19	0/1:13,4:16:19.06:131,0,19	0/1:5,4:12:0.97:76,0,1	1/1:4,1:5:10.71:40,11,0
chr10	26509618	.	TGTGTGTGTGTG	T	2667.52	PASS	AB=0.839;AC=32;AF=0.615;AN=52;BaseQRankSum=4.547;DP=275;FS=43.930;HRun=0;HaplotypeScore=115.5153;InbreedingCoeff=-0.0107;MQ=45.75;MQ0=10;MQRankSum=-4.650;QD=12.24;ReadPosRankSum=-1.255;VQSLOD=0.5456;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:17,3:20:1.37:125,1,0	1/1:3,1:4:1.30:75,1,0	0/0:6,0:2:2:0,2,35	./.	0/1:13,4:17:75.10:75,0,83	1/1:10,4:14:9.44:267,9,0	1/1:3,2:5:0.43:16,0,0	0/0:14,0:12:21.06:0,21,341	0/0:4,0:4:1.83:0,2,5	0/1:17,2:20:61.85:375,0,62	1/1:7,5:12:11.96:150,12,0	1/1:2,2:4:2.81:20,3,0	1/1:4,2:6:1.24:77,1,0	1/1:5,3:6:8.66:230,9,0	1/1:4,0:5:3.47:98,3,0	1/1:6,1:7:11.78:114,12,0	0/1:13,0:13:25.02:48,0,25	0/0:8,0:8:7.32:0,7,115	0/1:9,1:11:38.94:143,0,39	1/1:11,3:14:0.31:142,0,0	0/0:6,0:4:3.94:0,4,11	./.	1/1:7,2:9:1.96:30,2,0	0/0:5,0:5:1.36:0,1,3	0/1:10,2:12:24.53:92,0,25	0/1:14,4:16:35.88:367,0,36	0/1:7,4:11:18.95:292,0,19	0/1:4,1:5:0.72:73,0,1
chr10	26510677	.	CT	C	1343.75	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=10.133;DP=638;FS=0.000;HRun=6;HaplotypeScore=62.9050;InbreedingCoeff=0.9836;MQ=61.19;MQ0=7;MQRankSum=-3.386;QD=22.78;ReadPosRankSum=-1.394;VQSLOD=2.3529;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:69.22:0,69,908	0/0:5,0:5:12.04:0,12,158	0/0:13,0:9:27.08:0,27,344	0/0:17,0:12:36.12:0,36,470	0/0:33,0:33:93.29:0,93,1210	0/0:23,0:23:66.21:0,66,868	0/0:14,0:14:42.12:0,42,538	1/1:6,21:21:60.09:618,60,0	0/0:24,0:24:63.19:0,63,813	0/0:31,0:31:87.28:0,87,1145	0/0:21,0:21:57.19:0,57,750	0/0:19,0:19:57.19:0,57,750	0/0:22,0:22:66.21:0,66,867	0/0:21,0:21:63.20:0,63,829	0/0:37,0:37:99:0,105,1366	0/0:24,0:23:63.19:0,63,815	1/1:2,30:32:73.44:847,73,0	0/0:25,0:25:66.19:0,66,851	0/0:22,0:20:57.19:0,57,750	0/0:19,0:19:54.18:0,54,710	0/0:37,0:37:99:0,105,1367	0/0:16,0:16:42.14:0,42,553	0/0:21,0:21:60.20:0,60,790	0/0:26,0:26:69.22:0,69,908	0/0:17,0:17:51.08:0,51,634	0/0:26,0:26:78.25:0,78,1026	0/0:31,0:31:84.09:0,84,1033	0/0:12,0:12:33.11:0,33,434
chr10	26511594	.	A	AT	2218.12	PASS	AB=0.962;AC=50;AF=0.962;AN=52;BaseQRankSum=-3.303;DP=537;FS=5.123;HRun=1;HaplotypeScore=251.1873;InbreedingCoeff=0.0005;MQ=35.34;MQ0=3;MQRankSum=0.919;QD=4.19;ReadPosRankSum=-1.211;VQSLOD=-0.5295;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:28:22.24:76,22,0	1/1:15,0:15:5.32:23,5,0	./.	./.	1/1:30,0:30:16.82:110,17,0	1/1:37,0:37:29.05:84,29,0	1/1:8,1:9:10.45:57,10,0	1/1:23,0:17:26.38:93,26,0	1/1:17,0:17:11.68:33,12,0	1/1:20,1:21:42.17:214,42,0	0/1:22,0:22:1.67:9,0,2	1/1:17,0:17:6.62:49,7,0	1/1:20,0:20:13.35:48,13,0	1/1:27,0:27:9.05:130,9,0	1/1:28,1:29:28.87:147,29,0	1/1:22,0:22:23.82:120,24,0	1/1:9,0:9:4.44:37,4,0	1/1:14,0:14:18.12:95,18,0	1/1:15,1:16:27.51:181,28,0	1/1:31,1:32:30.89:151,31,0	1/1:5,1:6:11.31:77,11,0	1/1:31,0:31:25.50:128,25,0	1/1:21,1:22:7.46:106,7,0	0/1:11,1:12:7.69:67,0,8	1/1:12,0:12:11.15:36,11,0	1/1:28,0:28:27.68:103,28,0	1/1:25,0:25:18.23:114,18,0	1/1:5,0:5:6.49:15,6,0
chr10	26512318	.	C	CT	5707.11	PASS	AB=0.716;AC=45;AF=0.804;AN=56;BaseQRankSum=-8.916;DP=437;FS=4.248;HRun=12;HaplotypeScore=61.1914;InbreedingCoeff=0.3378;MQ=67.77;MQ0=0;MQRankSum=0.217;QD=15.18;ReadPosRankSum=2.021;VQSLOD=5.9437;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:12,8:20:50.71:429,51,0	1/1:0,2:2:6.01:58,6,0	0/0:10,0:8:11.72:0,12,80	0/1:9,0:7:22.03:22,0,27	1/1:9,24:34:47.88:587,48,0	1/1:1,10:11:5.13:212,5,0	1/1:7,6:14:5.44:143,5,0	0/0:5,0:24:37.72:0,38,109	1/1:2,8:10:18.03:175,18,0	0/1:9,10:21:2.10:272,0,2	1/1:2,18:20:44.70:410,45,0	0/1:5,9:15:0.88:154,0,1	1/1:4,13:17:1.44:181,1,0	1/1:4,11:16:26.88:246,27,0	1/1:0,0:10:22.73:114,23,0	1/1:2,11:13:24.04:234,24,0	0/0:5,0:27:30.53:0,31,90	0/1:6,5:11:12.88:49,0,13	1/1:10,13:23:20.14:351,20,0	1/1:3,10:13:5.22:200,5,0	1/1:4,1:5:5.85:38,6,0	1/1:5,9:14:24.04:233,24,0	1/1:3,15:18:33:312,33,0	1/1:5,4:10:21.12:168,21,0	1/1:4,10:15:4.30:235,4,0	1/1:4,14:19:1.03:303,1,0	1/1:2,17:19:17.22:328,17,0	0/1:7,10:17:7.66:255,0,8
chr10	26512574	.	G	GTT	1665.92	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-3.393;DP=442;FS=3.291;HRun=1;HaplotypeScore=63.6632;InbreedingCoeff=0.9314;MQ=90.73;MQ0=0;MQRankSum=-5.449;QD=43.84;ReadPosRankSum=-3.733;VQSLOD=2.7256;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:60.18:0,60,878	0/0:3,0:3:6.02:0,6,92	0/0:21,0:21:60.96:0,61,852	0/0:18,0:17:44.57:0,45,613	0/0:16,0:16:39.12:0,39,571	0/0:26,0:26:57.19:0,57,871	0/0:9,0:9:27.09:0,27,413	1/1:3,26:30:81.21:1426,81,0	0/0:13,0:13:39.13:0,39,597	0/0:17,0:17:51.17:0,51,761	0/0:14,0:14:42.12:0,42,598	0/0:11,0:11:33.10:0,33,484	0/0:17,0:17:51.17:0,51,777	0/0:15,0:15:42.13:0,42,621	0/0:17,0:17:51.16:0,51,752	0/0:13,0:13:36.10:0,36,527	1/1:2,6:8:24:361,24,0	0/0:5,0:5:15.05:0,15,222	0/0:23,0:23:63.20:0,63,936	0/0:13,0:13:39.13:0,39,597	0/0:25,0:25:75.22:0,75,1103	0/0:9,0:9:27.09:0,27,412	0/0:7,0:7:21.07:0,21,321	0/0:24,0:24:69.22:0,69,1034	0/0:21,0:21:63.20:0,63,940	0/0:17,0:17:48.12:0,48,673	0/0:23,0:22:66.21:0,66,986	0/0:6,0:6:16.30:0,16,224
chr10	26512628	.	GTA	G	380.03	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.711;DP=427;FS=11.431;HRun=0;HaplotypeScore=83.1158;InbreedingCoeff=0.9577;MQ=75.30;MQ0=1;MQRankSum=-5.402;QD=22.35;ReadPosRankSum=-0.645;VQSLOD=3.5452;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:54.16:0,54,989	0/0:6,0:6:18.06:0,18,344	0/0:24,0:24:63.20:0,63,1173	0/0:8,0:5:15.03:0,15,255	0/0:22,0:22:60.20:0,60,1008	0/0:21,0:21:18.06:0,18,331	0/0:11,0:11:30.07:0,30,494	1/1:12,0:11:24.08:329,24,0	0/0:15,0:15:42.13:0,42,775	0/0:18,0:18:54.16:0,54,948	0/0:14,0:14:38.09:0,38,640	0/0:18,0:18:51.17:0,51,982	0/0:15,0:15:42.14:0,42,800	0/0:14,0:14:39.13:0,39,736	0/0:16,0:16:38.99:0,39,718	0/0:19,0:19:51.83:0,52,958	1/1:1,4:5:12.04:167,12,0	0/0:6,0:6:18.06:0,18,325	0/0:19,0:19:54.18:0,54,973	0/0:14,0:14:42.14:0,42,807	0/0:23,0:23:66.18:0,66,1200	0/0:13,0:13:39.13:0,39,752	0/0:6,0:6:18.06:0,18,344	0/0:22,0:22:63.20:0,63,1174	0/0:15,0:15:42.14:0,42,808	0/0:18,0:18:54.19:0,54,1038	0/0:25,0:24:75.20:0,75,1342	0/0:9,0:9:27.09:0,27,519
chr10	26512631	.	T	TTC	478.93	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=6.438;DP=425;FS=11.484;HRun=0;HaplotypeScore=84.0425;InbreedingCoeff=0.7398;MQ=73.63;MQ0=1;MQRankSum=-5.167;QD=13.68;ReadPosRankSum=-2.498;VQSLOD=2.1649;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:54.16:0,54,782	0/0:6,0:6:18.06:0,18,274	0/0:22,0:22:60.19:0,60,905	0/0:8,0:5:12.04:0,12,183	0/0:23,0:23:60.20:0,60,864	0/0:22,0:22:18.06:0,18,269	0/0:11,0:11:26.82:0,27,368	1/1:3,8:10:27.05:370,27,0	0/0:15,0:15:42.13:0,42,620	0/0:16,0:16:45.15:0,45,685	0/0:15,0:15:23.39:0,23,432	0/0:18,0:18:51.17:0,51,762	0/0:14,0:14:42.14:0,42,639	0/0:14,0:14:39.12:0,39,560	0/0:16,0:16:42.10:0,42,575	0/1:20,0:20:66.42:66,0,425	1/1:4,0:4:12.04:167,12,0	0/0:6,0:6:18.02:0,18,249	0/0:19,0:19:54.16:0,54,772	0/0:14,0:14:42.14:0,42,624	0/0:22,0:22:60.20:0,60,911	0/0:13,0:13:39.13:0,39,594	0/0:7,0:7:15.63:0,16,193	0/0:21,0:21:63.21:0,63,956	0/0:15,0:15:45.14:0,45,653	0/0:18,0:18:54.18:0,54,820	0/0:25,0:24:66.22:0,66,1006	0/0:9,0:9:27.09:0,27,410
chr10	26512638	.	TCTTC	T	4392.86	PASS	AB=1.000;AC=31;AF=0.554;AN=56;BaseQRankSum=-12.063;DP=403;FS=1.443;HRun=0;HaplotypeScore=80.6622;InbreedingCoeff=-0.5529;MQ=70.24;MQ0=2;MQRankSum=-0.743;QD=11.65;ReadPosRankSum=3.638;VQSLOD=3.6382;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:19,0:19:99:168,0,207	0/1:6,0:6:53.96:54,0,90	0/0:19,0:19:47.21:0,47,492	0/0:7,0:4:9.03:0,9,106	1/1:0,22:22:59.27:590,59,0	1/1:4,17:21:3.01:57,3,0	1/1:8,0:8:24.02:254,24,0	1/1:7,0:5:14.78:99,15,0	0/1:14,0:14:99:114,0,205	0/1:16,0:16:99:217,0,151	0/1:14,0:14:99:121,0,111	0/1:18,0:18:99:213,0,225	0/1:13,0:13:76.73:77,0,134	0/1:13,0:13:97.21:172,0,97	0/1:16,0:16:99:144,0,152	0/1:19,0:19:94.46:201,0,94	1/1:4,0:4:11.78:73,12,0	0/1:5,0:5:27.97:28,0,93	0/1:17,0:17:90.39:216,0,90	0/1:15,0:15:99:159,0,163	0/1:19,0:19:99:259,0,165	0/1:15,0:15:99:163,0,153	0/1:9,0:9:52.15:57,0,52	0/1:20,0:20:99:206,0,231	0/1:16,0:16:99:246,0,118	0/1:16,0:16:99:171,0,174	0/1:25,0:24:99:202,0,291	0/1:10,0:10:44.24:134,0,44
chr10	26512931	.	AGTGTGTGTGTGTGTGT	A	2062	PASS	AB=1.000;AC=37;AF=0.771;AN=48;BaseQRankSum=3.069;DP=486;FS=0.000;HRun=0;HaplotypeScore=188.7242;InbreedingCoeff=0.2976;MQ=60.55;MQ0=20;MQRankSum=-2.138;QD=6.23;ReadPosRankSum=1.030;VQSLOD=2.1396;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:12,0:12:63.62:64,0,167	1/1:1,0:3:6.02:192,6,0	1/1:34,0:22:1.55:4,2,0	./.	1/1:20,0:19:3.01:72,3,0	1/1:13,0:14:9.02:161,9,0	0/0:18,0:18:0.47:0,0,1	0/0:26,0:26:18.62:0,19,208	1/1:13,4:19:9.03:282,9,0	./.	./.	1/1:11,3:14:3.01:130,3,0	1/1:12,0:15:3:112,3,0	0/0:17,0:17:0:0,0,0	0/0:21,0:21:21.07:0,21,1027	1/1:11,0:12:2.56:35,3,0	0/0:16,0:13:5.99:0,6,283	1/1:10,0:10:3.01:73,3,0	1/1:19,0:15:2.45:111,2,0	1/1:8,1:9:3.01:112,3,0	1/1:21,0:18:2.34:16,2,0	1/1:16,2:18:3:30,3,0	1/1:15,2:16:5.85:222,6,0	1/1:28,1:29:3.01:86,3,0	1/1:20,3:22:6.02:227,6,0	1/1:20,1:21:3.95:132,4,0	1/1:18,0:18:3.01:129,3,0	./.
chr10	26513429	.	AT	A	897.81	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.117;DP=427;FS=6.709;HRun=7;HaplotypeScore=42.3029;InbreedingCoeff=0.8525;MQ=73.88;MQ0=0;MQRankSum=0.040;QD=24.27;ReadPosRankSum=-3.381;VQSLOD=2.1321;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:39.12:0,39,488	0/0:10,0:10:27.09:0,27,339	0/0:11,0:10:10.84:0,11,109	0/0:7,0:7:0.12:0,0,67	0/0:28,0:28:78.25:0,78,981	0/0:17,0:17:51.15:0,51,628	0/0:18,0:18:51.13:0,51,614	1/1:3,26:29:81.14:804,81,0	0/0:15,0:15:45.14:0,45,565	0/0:21,0:21:63.19:0,63,779	0/0:15,0:15:42.13:0,42,517	0/0:10,0:10:27.08:0,27,327	0/0:16,0:16:39.12:0,39,491	0/0:13,0:13:39.11:0,39,477	0/0:17,0:17:48.15:0,48,603	0/0:19,0:19:45.14:0,45,555	1/1:2,6:8:21.04:214,21,0	0/0:7,0:7:15.05:0,15,185	0/0:17,0:17:45.13:0,45,554	0/0:15,0:15:42.12:0,42,515	0/0:9,0:9:27.09:0,27,340	0/0:20,0:20:54.15:0,54,655	0/0:14,0:14:39.11:0,39,477	0/0:8,0:8:21.06:0,21,252	0/0:20,0:20:60.19:0,60,755	0/0:18,0:18:51.16:0,51,642	0/0:23,0:23:69.22:0,69,868	0/0:9,0:9:27.09:0,27,340
chr10	26513464	.	AT	A	550.18	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.506;DP=454;FS=0.744;HRun=8;HaplotypeScore=46.5670;InbreedingCoeff=0.8163;MQ=78.18;MQ0=0;MQRankSum=-0.616;QD=17.19;ReadPosRankSum=-3.070;VQSLOD=2.6474;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:42.13:0,42,507	0/0:8,0:8:24.07:0,24,290	0/0:10,1:11:1.11:0,1,288	0/0:10,1:11:23.93:0,24,260	0/0:32,0:32:81.24:0,81,970	0/0:13,0:13:36.11:0,36,435	0/0:18,0:18:34.56:0,35,563	1/1:5,14:19:48.05:455,48,0	0/0:11,0:11:33.10:0,33,399	0/0:19,0:19:54.16:0,54,644	0/0:19,0:19:57.11:0,57,670	0/0:10,0:10:30.09:0,30,362	0/0:17,0:17:51.16:0,51,616	0/0:15,0:15:45.14:0,45,542	0/0:2,0:22:54.76:0,55,299	0/0:16,0:16:48.14:0,48,570	1/1:4,9:13:23.64:215,24,0	0/0:13,0:13:38.88:0,39,432	0/0:16,0:16:45.14:0,45,544	0/0:22,0:22:66.19:0,66,781	0/0:6,0:6:18.06:0,18,217	0/0:18,0:18:54.16:0,54,641	0/0:19,0:19:57.17:0,57,688	0/0:4,0:4:12.04:0,12,145	0/0:20,0:19:57.17:0,57,689	0/0:28,0:29:81.09:0,81,928	0/0:25,0:25:66.19:0,66,786	0/0:11,1:12:4.10:0,4,298
chr10	26514064	.	ATT	A	376.72	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=3.213;DP=460;FS=5.236;HRun=4;HaplotypeScore=108.7784;InbreedingCoeff=0.9542;MQ=64.15;MQ0=10;MQRankSum=-3.314;QD=14.49;ReadPosRankSum=0.001;VQSLOD=0.1283;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:48.09:0,48,762	0/0:8,0:8:24:0,24,363	0/0:21,0:13:34.90:0,35,492	0/0:30,0:17:45.13:0,45,699	0/0:25,0:25:57.02:0,57,835	0/0:14,0:14:32.78:0,33,540	0/0:13,0:13:36.06:0,36,548	1/1:4,10:15:30.13:345,30,0	0/0:12,0:12:29.24:0,29,339	0/0:19,0:19:38.73:0,39,908	0/0:17,0:17:38.96:0,39,505	0/0:13,0:13:24.80:0,25,280	0/0:20,0:20:48.16:0,48,827	0/0:18,0:18:44.60:0,45,726	0/0:21,0:20:52.22:0,52,592	0/0:20,0:19:47.64:0,48,691	1/1:8,3:11:15.49:150,15,0	0/0:7,0:6:21.06:0,21,286	0/0:6,0:6:18.05:0,18,292	0/0:26,0:26:74.31:0,74,919	0/0:19,0:19:48.63:0,49,793	0/0:15,0:15:33.84:0,34,491	0/0:16,0:16:41.79:0,42,613	0/0:20,0:20:48.11:0,48,729	0/0:14,0:14:33.36:0,33,480	0/0:13,0:13:36.12:0,36,607	0/0:23,0:23:59.12:0,59,867	0/0:5,0:5:8.99:0,9,124
chr10	26514103	.	ACTCTCTCTCTCT	A	7921.73	PASS	AB=0.700;AC=44;AF=0.917;AN=48;BaseQRankSum=-0.501;DP=491;FS=2.340;HRun=0;HaplotypeScore=189.0876;InbreedingCoeff=0.1086;MQ=43.94;MQ0=21;MQRankSum=-0.292;QD=17.80;ReadPosRankSum=3.231;VQSLOD=4.0894;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/1:7,3:12:5.47:307,0,5	./.	./.	1/1:11,14:24:11.47:205,11,0	./.	1/1:11,4:15:3.01:30,3,0	1/1:18,0:15:1.23:2,1,0	1/1:5,10:14:9.03:315,9,0	1/1:11,7:18:17.24:484,17,0	1/1:16,16:31:11.02:284,11,0	1/1:4,9:13:10.93:416,11,0	1/1:6,18:25:26.55:872,27,0	1/1:18,0:18:8.48:167,8,0	0/1:19,0:32:20.99:143,0,21	1/1:10,14:23:24.55:731,25,0	1/1:6,0:6:2.75:96,3,0	0/0:6,0:5:0:0,0,0	1/1:12,9:23:32.96:882,33,0	1/1:14,13:28:17.89:495,18,0	1/1:16,0:13:1.55:4,2,0	1/1:6,6:12:7.34:129,7,0	1/1:9,6:16:9.91:317,10,0	1/1:6,10:16:3.01:105,3,0	1/1:9,11:20:12.04:410,12,0	1/1:14,8:21:5.15:587,5,0	1/1:11,11:24:26.92:836,27,0	1/1:3,4:4:3.01:105,3,0
chr10	26514715	.	TAG	T	977.73	PASS	AB=0.628;AC=2;AF=0.036;AN=56;BaseQRankSum=8.072;DP=618;FS=0.719;HRun=0;HaplotypeScore=78.7816;InbreedingCoeff=-0.0246;MQ=75.24;MQ0=0;MQRankSum=-7.715;QD=18.45;ReadPosRankSum=-2.969;VQSLOD=2.8037;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:48.16:0,48,973	0/0:11,0:11:33.11:0,33,671	0/0:11,0:11:18.35:0,18,537	0/0:13,0:13:35.61:0,36,679	0/0:52,0:52:99:0,157,3138	0/0:26,0:26:78.27:0,78,1585	0/0:13,0:13:39.13:0,39,780	0/1:21,23:44:99:927,0,232	0/0:17,0:17:51.17:0,51,1001	0/0:37,0:37:99:0,111,2223	0/0:30,0:30:90.31:0,90,1827	0/0:22,0:22:66.23:0,66,1341	0/0:22,0:22:66.23:0,66,1341	0/0:28,0:28:84.26:0,84,1624	0/0:17,0:17:51.16:0,51,985	0/0:21,0:21:63.22:0,63,1275	0/1:3,6:9:18.91:139,0,19	0/0:14,0:14:42.14:0,42,836	0/0:13,0:13:39.13:0,39,786	0/0:38,0:38:99:0,114,2317	0/0:16,0:16:48.16:0,48,973	0/0:23,0:23:69.24:0,69,1393	0/0:21,0:21:63.20:0,63,1228	0/0:17,0:17:51.17:0,51,1009	0/0:26,0:25:78.25:0,78,1536	0/0:20,0:20:60.21:0,60,1220	0/0:28,0:28:84.29:0,84,1635	0/0:13,0:13:39.13:0,39,793
chr10	26514719	.	TGA	T	886.09	PASS	AB=0.780;AC=2;AF=0.036;AN=56;BaseQRankSum=10.865;DP=633;FS=10.314;HRun=0;HaplotypeScore=81.8873;InbreedingCoeff=0.3482;MQ=78.56;MQ0=0;MQRankSum=-10.983;QD=15.28;ReadPosRankSum=-2.294;VQSLOD=2.0471;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:48.14:0,48,936	0/0:11,0:11:33.10:0,33,634	0/0:14,0:14:42.10:0,42,719	0/0:16,0:16:44.91:0,45,722	0/0:53,0:53:99:0,160,3128	0/0:27,0:27:81.28:0,81,1634	0/0:11,0:11:33.10:0,33,634	0/1:30,18:48:99:867,0,106	0/0:16,0:16:48.16:0,48,964	0/0:38,0:38:99:0,114,2248	0/0:31,0:31:93.32:0,93,1888	0/0:23,0:23:69.21:0,69,1329	0/0:24,0:24:72.23:0,72,1422	0/0:28,0:28:84.26:0,84,1610	0/0:16,0:16:48.16:0,48,974	0/0:22,0:22:66.21:0,66,1304	0/1:8,2:10:0.61:108,0,1	0/0:14,0:14:42.10:0,42,798	0/0:15,0:15:45.15:0,45,898	0/0:38,0:38:99:0,114,2303	0/0:17,0:17:51.14:0,51,963	0/0:24,0:24:72.21:0,72,1396	0/0:21,0:21:63.22:0,63,1267	0/0:16,0:16:48.16:0,48,975	0/0:25,0:24:75.26:0,75,1523	0/0:20,0:20:60.21:0,60,1210	0/0:26,0:26:78.27:0,78,1583	0/0:13,0:13:39.13:0,39,792
chr10	26515433	.	A	AAT	1979.92	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-6.267;DP=559;FS=3.588;HRun=0;HaplotypeScore=63.1546;InbreedingCoeff=0.9571;MQ=74.04;MQ0=0;MQRankSum=1.039;QD=36.67;ReadPosRankSum=-3.598;VQSLOD=4.6887;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:36.12:0,36,472	0/0:10,0:10:30.10:0,30,394	0/0:17,0:17:30.10:0,30,391	0/0:9,0:8:14.88:0,15,188	0/0:30,0:30:90.28:0,90,1169	0/0:27,0:26:72.23:0,72,945	0/0:15,0:15:39.12:0,39,499	1/1:3,36:40:99:1690,111,0	0/0:23,0:23:60.20:0,60,788	0/0:21,0:21:54.18:0,54,707	0/0:25,0:25:66.21:0,66,867	0/0:13,0:13:39.11:0,39,498	0/0:13,0:13:36.12:0,36,473	0/0:15,0:15:42.12:0,42,537	0/0:29,0:29:72.23:0,72,934	0/0:22,0:22:60.19:0,60,777	1/1:5,9:14:24.08:411,24,0	0/0:14,0:14:36.12:0,36,473	0/0:23,0:23:57.16:0,57,721	0/0:34,0:34:99:0,102,1339	0/0:7,0:7:21.07:0,21,276	0/0:16,0:16:42.13:0,42,538	0/0:26,0:26:63.18:0,63,798	0/0:4,0:4:9.03:0,9,118	0/0:24,0:24:60.18:0,60,774	0/0:26,0:26:69.20:0,69,880	0/0:34,0:34:90.29:0,90,1183	0/0:9,0:9:21.07:0,21,276
chr10	26516052	.	T	TTA	1785.99	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=0.761;DP=601;FS=8.854;HRun=0;HaplotypeScore=69.7038;InbreedingCoeff=0.9446;MQ=72.47;MQ0=0;MQRankSum=-1.288;QD=45.79;ReadPosRankSum=-3.239;VQSLOD=3.7555;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:39.13:0,39,595	0/0:11,0:11:33.11:0,33,496	0/0:11,0:11:25.87:0,26,302	0/0:8,0:8:23.60:0,24,252	0/0:33,0:33:96.28:0,96,1401	0/0:33,0:33:99:0,99,1492	0/0:8,0:8:24.07:0,24,347	1/1:0,26:26:78.18:1261,78,0	0/0:20,0:20:57.16:0,57,811	0/0:29,0:29:87.27:0,87,1291	0/0:43,0:43:99:0,126,1840	0/0:22,0:22:66.20:0,66,967	0/0:20,0:20:60.17:0,60,857	0/0:22,0:22:66.19:0,66,943	0/0:30,0:30:90.25:0,90,1290	0/0:18,0:18:54.17:0,54,804	1/1:0,13:13:33.11:646,33,0	0/0:19,0:19:57.07:0,57,794	0/0:20,0:20:60.18:0,60,877	0/0:38,0:38:99:0,111,1590	0/0:8,0:8:24.08:0,24,367	0/0:19,0:19:57.15:0,57,790	0/0:26,0:26:78.24:0,78,1145	0/0:15,0:15:45.12:0,45,643	0/0:31,0:31:93.29:0,93,1396	0/0:19,0:19:57.17:0,57,833	0/0:41,0:41:99:0,123,1813	0/0:3,0:3:6.02:0,6,92
chr10	26516942	.	GGAGA	G	2480.61	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.296;DP=738;FS=1.857;HRun=0;HaplotypeScore=121.0972;InbreedingCoeff=0.9877;MQ=62.12;MQ0=1;MQRankSum=-4.932;QD=42.77;ReadPosRankSum=-0.724;VQSLOD=3.8246;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,132,3611	0/0:6,0:6:15.02:0,15,351	0/0:27,0:22:57.19:0,57,1376	0/0:22,0:22:49.48:0,49,1489	0/0:31,0:31:90.31:0,90,2396	0/0:21,0:21:63.22:0,63,1696	0/0:23,0:23:66.23:0,66,1791	1/1:2,27:26:72.23:1323,72,0	0/0:28,0:28:81.26:0,81,2109	0/0:34,0:34:93.29:0,93,2350	0/0:24,0:24:69.24:0,69,1793	0/0:22,0:22:57.20:0,57,1561	0/0:27,0:27:78.27:0,78,2064	0/0:34,0:34:96.33:0,96,2483	0/0:40,0:40:99:0,108,2868	0/0:31,0:31:93.32:0,93,2456	1/1:2,27:29:66.70:1279,67,0	0/0:30,0:30:84.29:0,84,2299	0/0:20,0:20:57.20:0,57,1514	0/0:33,0:33:96.33:0,96,2513	0/0:24,0:24:63.22:0,63,1703	0/0:22,0:22:66.20:0,66,1657	0/0:24,0:24:69.24:0,69,1888	0/0:37,0:36:99:0,108,2815	0/0:18,0:18:51.17:0,51,1397	0/0:26,0:26:75.25:0,75,2000	0/0:24,0:24:66.23:0,66,1807	0/0:6,0:6:18.01:0,18,430
chr10	26517549	.	TG	T	1268.57	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.658;DP=529;FS=5.374;HRun=8;HaplotypeScore=54.1051;InbreedingCoeff=0.9900;MQ=72.00;MQ0=0;MQRankSum=-1.229;QD=22.26;ReadPosRankSum=1.351;VQSLOD=4.1237;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:78.15:0,78,900	0/0:8,0:8:24.07:0,24,290	0/0:18,0:17:30:0,30,322	0/0:10,0:9:18.01:0,18,185	0/0:27,0:27:75.18:0,75,860	0/0:8,0:8:18.06:0,18,217	0/0:14,0:14:39.08:0,39,434	1/1:5,21:26:60.08:579,60,0	0/0:17,0:17:48.13:0,48,568	0/0:21,0:21:48.10:0,48,570	0/0:15,0:15:42.10:0,42,485	0/0:24,0:24:66.16:0,66,761	0/0:16,0:16:39.11:0,39,459	0/0:16,0:16:48.13:0,48,560	0/0:21,0:21:63.18:0,63,749	0/0:24,0:24:69.20:0,69,822	1/1:0,31:31:84.14:811,84,0	0/0:20,0:20:60.13:0,60,696	0/0:15,0:15:42.11:0,42,483	0/0:15,0:15:39.10:0,39,459	0/0:27,0:32:66.04:0,66,751	0/0:23,0:23:69.19:0,69,810	0/0:13,0:13:33.09:0,33,388	0/0:17,0:17:48.13:0,48,566	0/0:16,0:16:45.14:0,45,544	0/0:20,0:20:42.12:0,42,493	0/0:14,0:14:39.12:0,39,470	0/0:13,0:13:36.11:0,36,434
chr10	26517740	.	TCA	T	1802.77	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=10.077;DP=656;FS=3.950;HRun=0;HaplotypeScore=81.2354;InbreedingCoeff=0.9708;MQ=68.79;MQ0=0;MQRankSum=-2.166;QD=34.01;ReadPosRankSum=0.059;VQSLOD=5.3922;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:40:99:0,114,2058	0/0:18,0:18:54.18:0,54,996	0/0:32,0:32:84.23:0,84,1404	0/0:24,0:23:66.17:0,66,1131	0/0:20,0:20:60.21:0,60,1123	0/0:19,0:19:51.17:0,51,955	0/0:17,0:17:51.17:0,51,955	1/1:1,20:20:51.16:732,51,0	0/0:26,0:26:75.26:0,75,1393	0/0:34,0:34:99:0,102,1911	0/0:22,0:22:63.20:0,63,1121	0/0:25,0:25:75.26:0,75,1405	0/0:19,0:19:54.19:0,54,1011	0/0:17,0:17:51.17:0,51,955	0/0:22,0:22:66.23:0,66,1222	0/0:29,0:29:78.25:0,78,1414	1/1:1,31:32:81.27:1193,81,0	0/0:31,0:31:90.31:0,90,1685	0/0:22,0:22:60.19:0,60,1079	0/0:20,0:20:60.19:0,60,1092	0/0:22,0:22:66.23:0,66,1236	0/0:28,0:28:81.28:0,81,1517	0/0:19,0:19:57.20:0,57,1054	0/0:23,0:23:69.24:0,69,1270	0/0:22,0:22:66.23:0,66,1224	0/0:29,0:29:84.27:0,84,1511	0/0:19,0:19:54.19:0,54,1011	0/0:3,0:3:9.03:0,9,169
chr10	26518422	.	T	TA	1413.77	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-9.353;DP=420;FS=0.000;HRun=7;HaplotypeScore=39.2856;InbreedingCoeff=0.8748;MQ=67.89;MQ0=0;MQRankSum=-0.726;QD=25.70;ReadPosRankSum=-2.350;VQSLOD=2.6442;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:48.05:0,48,456	0/0:9,0:9:21.03:0,21,203	0/0:10,0:10:13.52:0,14,90	0/0:8,0:7:18.03:0,18,173	0/0:25,0:25:69.06:0,69,649	0/0:17,0:17:51.02:0,51,481	0/0:5,0:5:15.02:0,15,145	1/1:4,25:29:75.21:883,75,0	0/0:15,0:15:36.05:0,36,348	0/0:11,0:11:24.03:0,24,231	0/0:20,0:20:48.05:0,48,455	0/0:10,0:10:21.03:0,21,203	0/0:12,0:12:33.05:0,33,319	0/0:19,0:19:45.07:0,45,434	0/0:13,0:13:33.05:0,33,319	0/0:12,0:12:33.04:0,33,313	1/1:1,25:26:54.17:652,54,0	0/0:8,0:8:21.03:0,21,202	0/0:22,0:22:57.07:0,57,543	0/0:21,0:21:53.97:0,54,504	0/0:5,0:5:15.02:0,15,145	0/0:1,0:1:3:0,3,29	0/0:8,0:8:21.02:0,21,199	0/0:6,0:6:18.03:0,18,174	0/0:21,0:21:54.08:0,54,521	0/0:28,0:28:75.09:0,75,711	0/0:30,0:30:78.12:0,78,753	0/0:10,0:10:18.02:0,18,174
chr10	26519572	.	AGGGGGAAATTTTTCATAGTAGACAG	A	2162.90	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.672;DP=612;FS=3.665;HRun=0;HaplotypeScore=374.1216;InbreedingCoeff=0.9857;MQ=89.13;MQ0=0;MQRankSum=-4.821;QD=44.14;ReadPosRankSum=-3.744;VQSLOD=1.0707;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:42.14:0,42,4593	0/0:6,0:6:18.06:0,18,1670	0/0:24,0:23:66.23:0,66,3787	0/0:26,0:26:75.26:0,75,5278	0/0:24,0:24:69.22:0,69,7559	0/0:35,0:35:99:0,105,11186	0/0:13,0:13:39.13:0,39,3811	1/1:12,23:34:66.11:1469,66,0	0/0:9,0:9:27.09:0,27,2423	0/0:29,0:29:87.30:0,87,9076	0/0:23,0:23:69.24:0,69,6760	0/0:23,0:23:69.24:0,69,6429	0/0:24,0:24:69.24:0,69,6653	0/0:26,0:26:78.27:0,78,7651	0/0:28,0:28:81.28:0,81,8267	0/0:20,0:19:60.21:0,60,5546	1/1:1,13:14:15.01:812,15,0	0/0:10,0:10:30.10:0,30,3321	0/0:8,0:8:24.08:0,24,2074	0/0:21,0:22:66.23:0,66,6403	0/0:23,0:23:66.23:0,66,6538	0/0:16,0:16:45.15:0,45,4819	0/0:38,0:38:99:0,108,10838	0/0:16,0:16:48.15:0,48,4750	0/0:20,0:20:60.21:0,60,6447	0/0:30,0:30:90.31:0,90,9415	0/0:37,0:36:99:0,111,11897	0/0:18,0:18:48.16:0,48,5364
chr10	26521186	.	TA	T	1000.87	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.014;DP=508;FS=3.323;HRun=5;HaplotypeScore=51.0910;InbreedingCoeff=0.9677;MQ=76.18;MQ0=0;MQRankSum=-0.718;QD=27.80;ReadPosRankSum=-1.970;VQSLOD=2.6410;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:27.05:0,27,348	0/0:10,0:10:27.06:0,27,350	0/0:9,0:9:27.09:0,27,356	0/0:13,0:12:33.07:0,33,419	0/0:23,0:23:66.22:0,66,903	0/0:24,0:24:66.22:0,66,903	0/0:5,0:5:15.05:0,15,205	1/1:2,18:20:51.14:579,51,0	0/0:18,0:18:54.18:0,54,731	0/0:24,0:24:69.23:0,69,944	0/0:31,0:31:93.29:0,93,1243	0/0:22,0:22:66.22:0,66,901	0/0:24,0:24:63.21:0,63,861	0/0:21,0:21:60.20:0,60,821	0/0:24,0:24:69.22:0,69,928	0/0:17,0:17:48.16:0,48,657	1/1:0,16:16:48.14:544,48,0	0/0:7,0:7:21.07:0,21,284	0/0:11,0:11:33.10:0,33,436	0/0:36,0:36:99:0,105,1420	0/0:8,0:8:24.07:0,24,312	0/0:14,0:14:39.13:0,39,534	0/0:27,0:27:78.26:0,78,1067	0/0:6,0:6:18.06:0,18,246	0/0:28,0:28:84.28:0,84,1147	0/0:27,0:27:75.25:0,75,1026	0/0:28,0:27:81.25:0,81,1086	0/0:4,0:4:12.04:0,12,164
chr10	26521386	.	T	TC	473.92	PASS	AB=0.667;AC=3;AF=0.054;AN=56;BaseQRankSum=8.857;DP=620;FS=8.703;HRun=1;HaplotypeScore=70.8760;InbreedingCoeff=0.5730;MQ=90.35;MQ0=0;MQRankSum=-8.916;QD=10.77;ReadPosRankSum=-2.209;VQSLOD=0.2819;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:51.17:0,51,713	0/0:16,0:16:48.16:0,48,671	0/0:29,0:29:75.22:0,75,982	0/0:24,0:23:59.84:0,60,805	0/0:20,0:20:60.19:0,60,822	0/0:24,0:24:72.24:0,72,1004	0/0:17,0:17:51.17:0,51,710	1/1:10,26:36:0.63:508,1,0	0/0:24,0:24:72.22:0,72,972	0/0:23,0:23:66.22:0,66,923	0/0:22,0:22:66.19:0,66,878	0/0:15,0:15:45.15:0,45,629	0/0:19,0:19:57.18:0,57,780	0/0:30,0:30:84.28:0,84,1174	0/0:28,0:28:84.28:0,84,1175	0/0:21,0:21:60.20:0,60,839	0/1:4,4:7:3.40:56,0,3	0/0:16,0:16:46.04:0,46,625	0/0:19,0:19:57.19:0,57,794	0/0:35,0:35:99:0,105,1434	0/0:13,0:13:39.13:0,39,542	0/0:24,0:24:69.22:0,69,947	0/0:25,0:25:72.23:0,72,992	0/0:16,0:16:48.16:0,48,671	0/0:35,0:35:99:0,105,1452	0/0:29,0:29:87.27:0,87,1172	0/0:28,0:28:84.27:0,84,1160	0/0:7,0:7:21.07:0,21,294
chr10	26521387	.	T	TC	498.72	PASS	AB=0.667;AC=3;AF=0.054;AN=56;BaseQRankSum=8.959;DP=624;FS=7.005;HRun=0;HaplotypeScore=71.0744;InbreedingCoeff=0.7103;MQ=90.73;MQ0=0;MQRankSum=-8.787;QD=11.08;ReadPosRankSum=-2.225;VQSLOD=2.9037;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:51.17:0,51,703	0/0:16,0:16:48.16:0,48,669	0/0:30,0:30:78.23:0,78,990	0/0:24,0:23:59.82:0,60,778	0/0:20,0:20:60.19:0,60,819	0/0:24,0:24:72.24:0,72,1004	0/0:17,0:17:51.17:0,51,708	1/1:11,26:37:7.04:538,7,0	0/0:24,0:24:72.22:0,72,972	0/0:24,0:24:69.22:0,69,946	0/0:23,0:23:66.18:0,66,866	0/0:15,0:15:45.15:0,45,627	0/0:19,0:19:54.18:0,54,753	0/0:30,0:30:90.28:0,90,1219	0/0:28,0:28:84.28:0,84,1167	0/0:21,0:21:63.20:0,63,861	0/1:4,4:7:3.46:56,0,3	0/0:16,0:16:46.40:0,46,623	0/0:19,0:19:57.19:0,57,787	0/0:34,0:34:99:0,102,1412	0/0:13,0:13:39.13:0,39,545	0/0:24,0:24:72.22:0,72,972	0/0:25,0:25:75.23:0,75,1017	0/0:17,0:17:48.16:0,48,668	0/0:35,0:35:99:0,105,1447	0/0:28,0:28:84.26:0,84,1137	0/0:29,0:29:84.27:0,84,1158	0/0:7,0:7:21.07:0,21,294
chr10	26521838	.	GTAAA	G	550.66	PASS	AB=0.714;AC=3;AF=0.054;AN=56;BaseQRankSum=6.555;DP=672;FS=14.857;HRun=0;HaplotypeScore=112.3667;InbreedingCoeff=0.6721;MQ=64.24;MQ0=2;MQRankSum=-5.237;QD=26.22;ReadPosRankSum=-1.189;VQSLOD=2.0268;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:96.31:0,96,2332	0/0:6,0:6:18.06:0,18,522	0/0:35,0:28:84.27:0,84,2278	0/0:30,0:26:69.31:0,69,1929	0/0:44,0:44:99:0,132,3637	0/0:33,0:33:99:0,99,2790	0/0:16,0:16:48.16:0,48,1281	1/1:3,10:16:10.01:530,10,0	0/0:23,0:23:69.24:0,69,1945	0/0:33,0:33:99:0,99,2815	0/0:27,0:27:81.28:0,81,2208	0/0:15,0:15:45.15:0,45,1291	0/0:27,0:27:81.26:0,81,2284	0/0:26,0:26:78.27:0,78,2239	0/0:23,0:23:69.24:0,69,1963	0/0:31,0:31:93.31:0,93,2634	0/1:2,2:5:6.44:119,0,6	0/0:11,0:11:33.11:0,33,802	0/0:16,0:16:48.16:0,48,1392	0/0:34,0:34:99:0,102,2894	0/0:20,0:20:57.16:0,57,1479	0/0:23,0:23:69.24:0,69,2000	0/0:25,0:25:75.26:0,75,2134	0/0:16,0:16:48.16:0,48,1391	0/0:24,0:24:69.24:0,69,1966	0/0:32,0:32:96.29:0,96,2530	0/0:41,0:41:99:0,123,3444	0/0:4,0:4:12.04:0,12,346
chr10	26521845	.	CACGTAG	C	709.02	PASS	AB=0.714;AC=3;AF=0.054;AN=56;BaseQRankSum=7.161;DP=681;FS=26.414;HRun=0;HaplotypeScore=142.8797;InbreedingCoeff=0.5372;MQ=63.83;MQ0=1;MQRankSum=-6.034;QD=22.16;ReadPosRankSum=-1.587;VQSLOD=1.5587;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:93.29:0,93,3084	0/0:6,0:6:18.06:0,18,659	0/0:33,0:26:78.27:0,78,2626	0/0:24,0:22:60.08:0,60,1839	0/0:45,0:45:99:0,132,4619	0/0:33,0:33:99:0,99,3413	0/0:15,0:15:45.14:0,45,1478	0/1:15,10:25:99:639,0,121	0/0:23,0:23:69.24:0,69,2454	0/0:34,0:34:99:0,99,3479	0/0:27,0:27:81.28:0,81,2853	0/0:15,0:15:42.14:0,42,1474	0/0:27,0:27:81.23:0,81,2759	0/0:26,0:26:78.27:0,78,2598	0/0:23,0:23:69.22:0,69,2361	0/0:33,0:33:99:0,99,3271	1/1:5,2:7:6.27:165,6,0	0/0:13,0:13:36.12:0,36,1115	0/0:19,0:19:57.19:0,57,1883	0/0:35,0:35:99:0,105,3655	0/0:17,0:17:48.15:0,48,1512	0/0:27,0:27:81.26:0,81,2764	0/0:24,0:24:72.25:0,72,2525	0/0:17,0:17:51.15:0,51,1708	0/0:27,0:27:81.28:0,81,2825	0/0:26,0:26:75.25:0,75,2627	0/0:40,0:40:99:0,120,4089	0/0:4,0:4:12.04:0,12,439
chr10	26521965	.	AG	A	1064.07	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.670;DP=612;FS=24.421;HRun=2;HaplotypeScore=108.8447;InbreedingCoeff=0.9786;MQ=76.46;MQ0=0;MQRankSum=-7.203;QD=28.00;ReadPosRankSum=-3.203;VQSLOD=1.3354;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:81.27:0,81,1213	0/0:12,0:12:36.12:0,36,539	0/0:13,0:13:33.10:0,33,464	0/0:15,0:15:32.28:0,32,480	0/0:35,0:35:99:0,105,1532	0/0:32,0:32:96.29:0,96,1395	0/0:19,0:19:57.19:0,57,848	1/1:3,19:22:57.18:739,57,0	0/0:26,0:26:75.25:0,75,1122	0/0:26,0:26:75.25:0,75,1107	0/0:24,0:24:72.24:0,72,1073	0/0:13,0:13:39.12:0,39,565	0/0:35,0:35:99:0,102,1507	0/0:16,0:16:48.15:0,48,699	0/0:24,0:24:72.24:0,72,1074	0/0:28,0:28:84.27:0,84,1238	1/1:2,14:16:36.07:447,36,0	0/0:7,0:7:11.16:0,11,218	0/0:21,0:21:57.19:0,57,854	0/0:29,0:29:87.27:0,87,1257	0/0:11,0:11:33.11:0,33,494	0/0:25,0:25:75.25:0,75,1120	0/0:18,0:18:54.12:0,54,761	0/0:19,0:19:54.14:0,54,784	0/0:33,0:32:96.28:0,96,1378	0/0:21,0:21:60.19:0,60,880	0/0:37,0:37:99:0,111,1636	0/0:7,0:7:21.07:0,21,304
chr10	26522216	.	CG	C	1384.98	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=10.255;DP=615;FS=5.805;HRun=1;HaplotypeScore=59.7287;InbreedingCoeff=0.9832;MQ=86.09;MQ0=0;MQRankSum=-2.249;QD=31.48;ReadPosRankSum=-0.891;VQSLOD=2.7776;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:33.11:0,33,527	0/0:14,0:14:42.13:0,42,642	0/0:20,0:20:57.19:0,57,903	0/0:20,0:20:54.10:0,54,756	0/0:33,0:33:99:0,99,1569	0/0:30,0:30:90.31:0,90,1436	0/0:20,0:20:57.18:0,57,883	1/1:1,28:29:81.22:967,81,0	0/0:23,0:23:69.22:0,69,1077	0/0:31,0:31:93.29:0,93,1459	0/0:27,0:27:81.28:0,81,1285	0/0:17,0:17:51.13:0,51,783	0/0:26,0:26:78.27:0,78,1235	0/0:23,0:23:69.22:0,69,1077	0/0:28,0:27:81.28:0,81,1293	0/0:26,0:26:78.25:0,78,1215	1/1:0,15:15:45.10:540,45,0	0/0:8,0:8:24.08:0,24,380	0/0:21,0:21:63.18:0,63,937	0/0:30,0:30:87.25:0,87,1361	0/0:19,0:19:57.19:0,57,906	0/0:26,0:26:78.25:0,78,1216	0/0:17,0:17:51.17:0,51,804	0/0:14,0:14:42.14:0,42,671	0/0:37,0:37:99:0,111,1764	0/0:19,0:19:57.11:0,57,850	0/0:27,0:27:78.27:0,78,1242	0/0:4,0:4:12.04:0,12,192
chr10	26522553	.	A	AC	1570.74	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-6.696;DP=642;FS=1.354;HRun=1;HaplotypeScore=60.6124;InbreedingCoeff=0.9833;MQ=88.14;MQ0=1;MQRankSum=-3.717;QD=40.28;ReadPosRankSum=-2.310;VQSLOD=3.3370;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:48.16:0,48,671	0/0:9,0:9:27.09:0,27,378	0/0:28,0:28:81.25:0,81,1067	0/0:21,0:21:50.80:0,51,661	0/0:28,0:28:81.26:0,81,1107	0/0:31,0:31:93.31:0,93,1301	0/0:20,0:20:57.17:0,57,765	1/1:1,27:27:81.26:1261,81,0	0/0:15,0:15:42.13:0,42,571	0/0:30,0:30:90.29:0,90,1227	0/0:32,0:32:96.32:0,96,1334	0/0:22,0:22:66.22:0,66,915	0/0:38,0:38:99:0,111,1509	0/0:21,0:21:63.20:0,63,867	0/0:27,0:27:81.25:0,81,1092	0/0:26,0:26:78.26:0,78,1086	1/1:1,10:11:27.09:431,27,0	0/0:14,0:14:39.13:0,39,545	0/0:24,0:24:72.24:0,72,999	0/0:27,0:27:81.22:0,81,1062	0/0:15,0:15:45.14:0,45,610	0/0:17,0:17:51.17:0,51,713	0/0:25,0:25:75.23:0,75,1009	0/0:21,0:21:63.20:0,63,863	0/0:30,0:30:87.28:0,87,1193	0/0:29,0:29:87.22:0,87,1160	0/0:33,0:32:99:0,99,1367	0/0:4,0:4:12.04:0,12,168
chr10	26522818	.	TG	T	1243.82	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.346;DP=623;FS=0.613;HRun=2;HaplotypeScore=59.6152;InbreedingCoeff=0.9867;MQ=87.13;MQ0=0;MQRankSum=-1.880;QD=32.73;ReadPosRankSum=-3.387;VQSLOD=2.3580;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:60.18:0,60,859	0/0:5,0:5:15.03:0,15,187	0/0:18,0:18:44.94:0,45,503	0/0:24,0:24:55.33:0,55,672	0/0:33,0:33:99:0,99,1439	0/0:28,0:28:81.21:0,81,1150	0/0:23,0:23:69.23:0,69,1034	1/1:0,28:28:84.22:1034,84,0	0/0:17,0:17:51.17:0,51,764	0/0:27,0:27:78.25:0,78,1133	0/0:26,0:26:75.23:0,75,1069	0/0:31,0:31:93.29:0,93,1370	0/0:25,0:25:75.23:0,75,1099	0/0:23,0:23:69.20:0,69,991	0/0:28,0:28:81.24:0,81,1154	0/0:32,0:32:96.33:0,96,1434	1/1:0,10:10:27.05:332,27,0	0/0:10,0:10:26.99:0,27,331	0/0:29,0:29:81.27:0,81,1194	0/0:32,0:32:96.28:0,96,1359	0/0:13,0:13:39.10:0,39,542	0/0:15,0:15:45.15:0,45,674	0/0:16,0:16:48.16:0,48,716	0/0:16,0:16:48.15:0,48,700	0/0:23,0:23:69.23:0,69,1031	0/0:28,0:28:84.25:0,84,1202	0/0:35,0:35:99:0,105,1510	0/0:7,0:7:18.06:0,18,268
chr10	26523137	.	CACAG	C	2422	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=10.103;DP=679;FS=0.552;HRun=0;HaplotypeScore=110.7060;InbreedingCoeff=0.8136;MQ=62.08;MQ0=4;MQRankSum=-7.970;QD=33.18;ReadPosRankSum=-0.777;VQSLOD=3.0892;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:71.47:0,71,2505	0/0:11,0:11:30.10:0,30,821	0/0:28,0:21:60.20:0,60,1564	0/0:35,0:31:80.86:0,81,2121	0/0:37,0:37:99:0,108,2893	0/0:25,0:25:75.23:0,75,1906	0/0:21,0:21:54.19:0,54,1447	1/1:2,25:25:69.21:1263,69,0	0/0:22,0:22:66.23:0,66,1800	0/0:32,0:32:90.31:0,90,2461	0/0:14,0:14:36.12:0,36,986	0/0:29,0:29:84.29:0,84,2260	0/0:32,0:32:90.29:0,90,2356	0/0:25,0:25:75.26:0,75,2056	0/0:25,0:25:75.26:0,75,2043	0/0:17,0:17:51.18:0,51,1398	1/1:0,25:25:66.23:1279,66,0	0/1:21,0:21:3.87:4,0,1298	0/0:20,0:18:48.16:0,48,1315	0/0:20,0:20:60.21:0,60,1644	0/0:36,0:35:99:0,108,2950	0/0:16,0:16:48.16:0,48,1280	0/0:18,0:18:48.16:0,48,1308	0/0:20,0:20:54.19:0,54,1441	0/0:24,0:24:66.22:0,66,1752	0/0:16,0:16:48.16:0,48,1305	0/0:45,0:45:99:0,135,3627	0/0:3,0:3:9.03:0,9,247
chr10	26524298	.	T	TTGA	27419.47	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-7.605;DP=565;FS=4.142;HRun=0;HaplotypeScore=59.8849;InbreedingCoeff=0.8793;MQ=73.80;MQ0=0;MQRankSum=-8.080;QD=50.87;ReadPosRankSum=5.334;VQSLOD=7.0783;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,10:11:24.08:535,24,0	1/1:0,6:6:15.05:317,15,0	0/0:10,0:10:25.28:0,25,312	0/0:16,0:16:41.57:0,42,544	1/1:2,23:25:63.21:1340,63,0	1/1:5,34:40:72.25:1605,72,0	1/1:2,20:22:51.17:1138,51,0	1/1:5,29:33:87.27:1836,87,0	1/1:1,12:14:33.11:675,33,0	1/1:3,18:21:54.18:1165,54,0	1/1:1,16:17:48.16:1035,48,0	1/1:1,18:19:51.18:1135,51,0	1/1:2,20:22:45.15:1000,45,0	1/1:2,28:31:60.21:1337,60,0	1/1:1,32:33:81.28:1777,81,0	1/1:2,14:16:39.13:870,39,0	1/1:0,7:7:18.06:400,18,0	1/1:0,13:13:33.11:736,33,0	1/1:1,8:12:33.09:619,33,0	1/1:4,37:41:99:2177,102,0	1/1:0,6:6:9.03:170,9,0	1/1:0,19:20:51.09:1088,51,0	1/1:2,21:23:51.17:1138,51,0	1/1:0,21:22:48.02:1071,48,0	1/1:1,28:29:66.23:1473,66,0	1/1:2,18:21:57.17:1180,57,0	1/1:3,25:27:69.24:1537,69,0	1/1:4,1:5:3.01:67,3,0
chr10	26524519	.	A	AT	1569.25	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=10.050;DP=545;FS=3.749;HRun=3;HaplotypeScore=52.4518;InbreedingCoeff=0.9589;MQ=68.99;MQ0=0;MQRankSum=-0.768;QD=36.49;ReadPosRankSum=-4.229;VQSLOD=2.2902;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:8:21.05:0,21,241	0/0:8,0:8:24.06:0,24,277	0/0:8,0:8:24.07:0,24,288	0/0:5,0:5:9.50:0,9,109	0/0:26,0:26:75.22:0,75,888	0/0:23,0:23:63.18:0,63,744	0/0:9,0:9:24.06:0,24,277	1/1:1,37:38:99:1505,111,0	0/0:24,0:24:69.18:0,69,804	0/0:21,0:21:63.19:0,63,756	0/0:40,0:40:99:0,114,1335	0/0:15,0:15:45.14:0,45,540	0/0:17,0:17:42.13:0,42,504	0/0:17,0:17:51.16:0,51,612	0/0:21,0:21:48.15:0,48,576	0/0:14,0:14:42.13:0,42,504	1/1:0,5:5:14.96:183,15,0	0/0:14,0:14:39.12:0,39,467	0/0:24,0:24:69.21:0,69,828	0/0:24,0:23:69.20:0,69,817	0/0:14,0:14:42.12:0,42,494	0/0:18,0:18:51.14:0,51,600	0/0:37,0:37:99:0,102,1209	0/0:8,0:8:24.07:0,24,288	0/0:29,0:29:87.25:0,87,1031	0/0:33,0:33:96.28:0,96,1140	0/0:34,0:33:96.23:0,96,1102	0/0:11,0:11:33.10:0,33,395
chr10	26524583	.	TG	T	727.23	PASS	AC=2;AF=0.037;AN=54;BaseQRankSum=6.400;DP=520;FS=4.068;HRun=2;HaplotypeScore=50.4764;InbreedingCoeff=0.9645;MQ=83.27;MQ0=0;MQRankSum=-1.432;QD=29.09;ReadPosRankSum=-3.400;VQSLOD=2.2655;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:30.09:0,30,429	0/0:10,0:10:27.09:0,27,405	0/0:22,0:22:60.18:0,60,829	0/0:9,0:9:24.08:0,24,359	0/0:27,0:27:81.26:0,81,1186	0/0:20,0:20:60.19:0,60,879	0/0:12,0:12:33.10:0,33,475	1/1:5,20:25:66.19:822,66,0	0/0:18,0:18:54.18:0,54,808	0/0:31,0:31:90.30:0,90,1349	0/0:25,0:25:72.24:0,72,1065	0/0:16,0:16:48.15:0,48,701	0/0:18,0:18:54.16:0,54,768	0/0:24,0:24:72.24:0,72,1079	0/0:20,0:20:45.15:0,45,674	0/0:14,0:14:42.13:0,42,611	./.	0/0:15,0:15:42.14:0,42,629	0/0:17,0:17:51.15:0,51,725	0/0:32,0:32:93.30:0,93,1374	0/0:11,0:11:33.09:0,33,456	0/0:18,0:18:54.17:0,54,789	0/0:26,0:26:78.25:0,78,1148	0/0:4,0:4:12.04:0,12,180	0/0:32,0:32:96.30:0,96,1398	0/0:28,0:28:81.23:0,81,1188	0/0:27,0:27:81.19:0,81,1123	0/0:8,0:8:24.08:0,24,359
chr10	26524601	.	A	ATT	889.10	PASS	AC=4;AF=0.074;AN=54;BaseQRankSum=0.607;DP=515;FS=2.187;HRun=7;HaplotypeScore=63.6548;InbreedingCoeff=0.9609;MQ=81.06;MQ0=0;MQRankSum=-3.030;QD=17.78;ReadPosRankSum=-2.061;VQSLOD=0.6720;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:30.08:0,30,349	0/0:9,0:9:24.07:0,24,278	0/0:18,0:18:45.06:0,45,483	0/0:10,0:10:18.03:0,18,206	0/0:26,0:26:72.21:0,72,838	0/0:17,0:17:48.14:0,48,559	0/0:12,0:12:36.11:0,36,420	1/1:5,0:25:48.60:173,49,0	0/0:17,0:17:48.12:0,48,549	0/0:30,0:30:81.23:0,81,940	0/0:20,0:20:54.15:0,54,629	0/0:13,0:13:36.10:0,36,419	0/0:25,0:25:72.21:0,72,839	0/0:21,0:21:57.17:0,57,664	1/1:1,23:25:51.17:837,51,0	0/0:14,0:14:42.12:0,42,489	./.	0/0:19,0:19:48.10:0,48,544	0/0:15,0:15:39.11:0,39,455	0/0:41,0:41:99:0,111,1281	0/0:9,0:9:27.08:0,27,314	0/0:19,0:19:51.15:0,51,594	0/0:23,0:23:57.16:0,57,664	0/0:4,0:4:9.03:0,9,105	0/0:29,0:29:78.20:0,78,897	0/0:27,0:27:69.19:0,69,804	0/0:26,0:26:69.18:0,69,793	0/0:8,0:8:18.04:0,18,210
chr10	26525062	.	AT	A	1793.83	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.097;DP=677;FS=1.864;HRun=2;HaplotypeScore=109.7227;InbreedingCoeff=0.9916;MQ=77.60;MQ0=0;MQRankSum=-1.244;QD=37.37;ReadPosRankSum=-2.877;VQSLOD=2.6431;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:87.26:0,87,1335	0/0:11,0:11:33.11:0,33,528	0/0:22,0:22:65.98:0,66,936	0/0:18,0:18:46.20:0,46,707	0/0:41,0:41:99:0,123,1854	0/0:32,0:32:90.29:0,90,1415	0/0:17,0:17:51.16:0,51,788	1/1:0,28:28:84.22:1119,84,0	0/0:19,0:19:57.16:0,57,861	0/0:33,0:33:96.30:0,96,1452	0/0:32,0:32:96.33:0,96,1534	0/0:28,0:28:84.29:0,84,1343	0/0:29,0:29:84.26:0,84,1277	0/0:23,0:23:69.20:0,69,1055	0/0:34,0:34:99:0,102,1607	0/0:26,0:26:75.26:0,75,1197	1/1:0,20:20:57.19:796,57,0	0/0:12,0:12:32.47:0,32,487	0/0:20,0:20:60.19:0,60,916	0/0:32,0:32:96.28:0,96,1464	0/0:27,0:27:81.24:0,81,1241	0/0:31,0:31:93.30:0,93,1461	0/0:23,0:23:69.16:0,69,1049	0/0:17,0:17:51.17:0,51,815	0/0:19,0:19:57.19:0,57,906	0/0:18,0:18:54.16:0,54,819	0/0:31,0:31:93.30:0,93,1460	0/0:5,0:5:15.05:0,15,240
chr10	26525741	.	CA	C	1276.43	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.208;DP=486;FS=2.138;HRun=3;HaplotypeScore=49.2927;InbreedingCoeff=0.9849;MQ=84.67;MQ0=0;MQRankSum=-1.288;QD=29.68;ReadPosRankSum=0.042;VQSLOD=2.7998;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:57.19:0,57,821	0/0:5,0:5:15.05:0,15,216	0/0:14,0:14:39.12:0,39,518	0/0:15,0:15:36.12:0,36,507	0/0:15,0:15:45.15:0,45,647	0/0:16,0:16:45.14:0,45,631	0/0:21,0:21:63.18:0,63,868	1/1:3,25:28:75.21:915,75,0	0/0:18,0:18:51.17:0,51,735	0/0:13,0:13:39.13:0,39,562	0/0:18,0:18:54.18:0,54,776	0/0:21,0:21:63.21:0,63,907	0/0:18,0:18:54.17:0,54,759	0/0:22,0:22:66.22:0,66,948	0/0:20,0:20:60.20:0,60,864	0/0:32,0:32:93.30:0,93,1314	1/1:0,15:15:39.12:483,39,0	0/0:6,0:6:18.06:0,18,259	0/0:24,0:24:72.22:0,72,995	0/0:20,0:20:60.19:0,60,844	0/0:23,0:23:69.23:0,69,988	0/0:10,0:10:27.09:0,27,389	0/0:19,0:19:57.19:0,57,814	0/0:14,0:14:42.10:0,42,582	0/0:11,0:11:33.11:0,33,474	0/0:18,0:18:54.17:0,54,763	0/0:23,0:23:66.22:0,66,951	0/0:7,0:6:21.07:0,21,302
chr10	26526314	.	T	TA	13569.99	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-11.263;DP=477;FS=31.563;HRun=5;HaplotypeScore=40.5202;InbreedingCoeff=0.9892;MQ=73.65;MQ0=0;MQRankSum=-3.636;QD=34.27;ReadPosRankSum=4.949;VQSLOD=2.5954;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,8:8:21.07:276,21,0	1/1:0,7:7:21.07:276,21,0	0/0:7,0:7:21.05:0,21,226	0/0:8,0:8:18.03:0,18,186	1/1:1,30:31:84.23:1086,84,0	1/1:2,21:23:60.20:790,60,0	1/1:1,11:12:33.11:434,33,0	0/0:35,0:35:93.23:0,93,999	1/1:0,10:10:27.09:355,27,0	1/1:2,15:17:45.15:592,45,0	1/1:1,26:27:69.22:908,69,0	1/1:2,16:18:45.15:592,45,0	1/1:1,15:17:51.16:660,51,0	1/1:1,16:17:45.15:592,45,0	0/0:23,0:23:69.17:0,69,742	1/1:2,19:21:27.95:718,28,0	0/0:8,0:8:13.86:0,14,160	1/1:2,13:15:42.14:553,42,0	1/1:3,14:17:42.11:523,42,0	1/1:4,15:19:45.08:555,45,0	1/1:1,14:15:36.12:474,36,0	1/1:1,9:10:27.09:355,27,0	1/1:0,12:12:30.10:395,30,0	1/1:0,10:10:27.09:355,27,0	1/1:2,17:19:39.13:513,39,0	1/1:1,18:19:54.18:711,54,0	1/1:4,36:40:99:1381,105,0	1/1:0,12:12:36.12:474,36,0
chr10	26527468	.	AAGAT	A	34803.06	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=6.384;DP=721;FS=6.888;HRun=0;HaplotypeScore=138.6446;InbreedingCoeff=0.9393;MQ=59.49;MQ0=3;MQRankSum=-4.515;QD=54.13;ReadPosRankSum=4.407;VQSLOD=6.2095;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,46:46:99:2376,114,0	1/1:0,9:9:21.07:440,21,0	0/0:26,0:20:60.19:0,60,1589	0/0:19,0:18:51.17:0,51,1409	1/1:0,28:28:63.22:1311,63,0	1/1:0,29:29:81.28:1692,81,0	1/1:0,24:24:60.21:1249,60,0	1/1:0,32:30:90.31:1845,90,0	1/1:0,25:25:72.25:1509,72,0	1/1:0,29:29:87.28:1734,87,0	1/1:0,16:16:45.15:939,45,0	1/1:0,41:41:87.27:1812,87,0	1/1:0,26:26:69.24:1446,69,0	1/1:0,34:34:99:2070,99,0	0/0:33,0:33:99:0,99,2783	1/1:0,37:37:99:2196,105,0	1/1:0,28:28:74.84:1572,75,0	1/1:0,20:20:45.15:919,45,0	1/1:0,18:16:42.14:852,42,0	1/1:1,22:23:60.21:1244,60,0	1/1:0,29:29:69.24:1425,69,0	1/1:0,21:21:54.19:1118,54,0	1/1:0,21:21:63.22:1305,63,0	1/1:0,35:35:87.04:1824,87,0	1/1:1,23:24:63.22:1316,63,0	1/1:0,17:17:48.16:984,48,0	1/1:0,30:30:75.26:1563,75,0	1/1:0,1:1:3.01:63,3,0
chr10	26527950	.	G	GTTAATATAT	58330.67	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-6.972;DP=632;FS=1.066;HRun=0;HaplotypeScore=143.8665;InbreedingCoeff=0.9560;MQ=75.99;MQ0=0;MQRankSum=-12.424;QD=104.35;ReadPosRankSum=3.488;VQSLOD=5.7080;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,3:15:27.09:1099,27,0	1/1:4,7:12:30.10:1297,30,0	0/0:25,0:25:66.09:0,66,1697	0/0:19,0:19:42.53:0,43,1214	1/1:13,22:37:96.24:3596,96,0	1/1:5,22:32:69.24:3253,69,0	1/1:3,10:14:33.11:1502,33,0	1/1:28,8:37:99:4283,105,0	1/1:7,11:19:51.18:2093,51,0	1/1:8,24:37:99:3991,99,0	1/1:9,18:27:66.18:2835,66,0	1/1:8,14:25:63.22:2768,63,0	1/1:7,14:23:54.19:2214,54,0	1/1:3,17:22:54.19:2482,54,0	0/0:29,0:29:75.23:0,75,2077	1/1:6,13:23:54.19:2441,54,0	1/1:4,7:11:27.06:1090,27,0	1/1:4,4:8:21.07:968,21,0	1/1:4,6:13:33.58:1287,34,0	1/1:13,16:32:75.21:3088,75,0	1/1:5,3:9:15.05:608,15,0	1/1:9,16:27:69.19:2936,69,0	1/1:6,18:27:63.21:2718,63,0	1/1:1,4:6:6.02:287,6,0	1/1:11,14:27:60.20:2556,60,0	1/1:3,18:24:69.23:2863,69,0	1/1:3,27:32:90.31:4279,90,0	1/1:5,10:18:39.13:1798,39,0
chr10	26528722	.	AAC	A	18893.98	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=14.101;DP=641;FS=16.963;HRun=0;HaplotypeScore=163.5580;InbreedingCoeff=0.9878;MQ=79.58;MQ0=0;MQRankSum=-7.065;QD=36.55;ReadPosRankSum=5.455;VQSLOD=5.2617;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,21:24:63.17:879,63,0	1/1:0,11:11:33.11:473,33,0	0/0:21,0:21:57.11:0,57,959	0/0:18,0:18:47.84:0,48,829	1/1:0,29:29:78.22:1088,78,0	1/1:0,24:24:69.15:935,69,0	1/1:1,21:22:54.09:713,54,0	0/0:35,0:35:90.25:0,90,1606	1/1:1,15:16:45.15:644,45,0	1/1:3,26:29:81.15:1094,81,0	1/1:0,21:21:54.18:773,54,0	1/1:0,19:19:51.17:725,51,0	1/1:2,27:29:75.25:1074,75,0	1/1:1,25:26:66.22:932,66,0	0/0:19,1:20:14.21:0,14,931	1/1:1,34:35:96.32:1375,96,0	0/0:30,0:30:84.27:0,84,1507	1/1:1,9:10:12.04:172,12,0	1/1:0,13:13:39.13:547,39,0	1/1:0,22:22:63.08:832,63,0	1/1:2,22:24:54.18:767,54,0	1/1:1,23:24:63.13:868,63,0	1/1:0,16:16:42.05:541,42,0	1/1:0,16:16:42.10:562,42,0	1/1:2,35:37:96.24:1329,96,0	1/1:1,21:22:63.21:900,63,0	1/1:3,34:37:96.24:1328,96,0	1/1:3,8:11:24.08:343,24,0
chr10	26528840	.	TTTTG	T	15175.22	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=12.862;DP=650;FS=0.935;HRun=0;HaplotypeScore=236.1406;InbreedingCoeff=0.9087;MQ=54.71;MQ0=0;MQRankSum=-12.508;QD=28.96;ReadPosRankSum=3.959;VQSLOD=4.5113;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,21:29:48.12:752,48,0	1/1:0,12:12:33.08:509,33,0	0/0:16,0:13:12.41:0,12,286	0/0:16,0:15:10.01:0,10,482	1/1:4,25:29:62.80:788,63,0	1/1:8,26:34:66.23:1074,66,0	1/1:6,15:21:22.32:345,22,0	0/0:45,0:45:96.28:0,96,1976	1/1:9,17:26:45.15:732,45,0	1/1:5,20:25:60.17:927,60,0	1/1:3,26:29:66.05:958,66,0	1/1:4,16:20:42.14:683,42,0	1/1:13,20:33:75.20:1127,75,0	1/1:9,15:24:39.13:635,39,0	0/0:30,0:30:63.18:0,63,1356	1/1:5,19:24:48.16:781,48,0	0/0:19,0:19:51.12:0,51,1066	1/1:4,2:6:6.02:98,6,0	1/1:9,9:18:24.01:313,24,0	1/1:14,25:39:63.07:912,63,0	1/1:6,8:14:15.01:215,15,0	1/1:8,19:27:51.17:830,51,0	1/1:2,23:25:53.66:762,54,0	1/1:5,8:13:12.04:178,12,0	1/1:5,18:23:48.08:723,48,0	1/1:1,14:15:41.59:614,42,0	1/1:8,26:34:72.25:1172,72,0	1/1:3,1:4:3.01:49,3,0
chr10	26529647	.	GATATATATATATGTATATATAT	G	19406.59	PASS	AC=42;AF=0.840;AN=50;BaseQRankSum=0.787;DP=449;FS=5.877;HRun=0;HaplotypeScore=214.4068;InbreedingCoeff=0.6779;MQ=58.71;MQ0=3;MQRankSum=-3.466;QD=49.51;ReadPosRankSum=2.721;VQSLOD=3.5645;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,24:33:25.83:1140,26,0	1/1:1,5:6:9.03:414,9,0	0/0:13,0:5:0.45:0,0,0	0/0:30,0:16:15.22:0,15,205	1/1:10,24:34:33.11:1472,33,0	1/1:9,14:23:24.08:1270,24,0	1/1:5,10:15:9.03:533,9,0	1/1:29,0:29:15.04:277,15,0	1/1:4,12:16:21.07:1095,21,0	1/1:10,15:25:33.11:1616,33,0	1/1:4,16:20:24.04:1187,24,0	1/1:2,10:12:9.03:457,9,0	1/1:2,14:16:24.08:1422,24,0	1/1:4,6:10:9.03:532,9,0	0/0:3,0:3:9.03:0,9,858	1/1:5,7:12:9.03:456,9,0	1/1:8,15:20:8.72:533,9,0	./.	1/1:7,9:16:27.04:893,27,0	1/1:9,8:17:18.06:768,18,0	./.	./.	1/1:0,9:9:6.02:355,6,0	0/0:6,0:6:0.47:0,0,1	1/1:10,19:29:39.13:2235,39,0	1/1:6,14:20:33.03:1508,33,0	1/1:7,12:19:15.05:888,15,0	1/1:4,4:8:5.94:356,6,0
chr10	26529669	.	T	TG	3496.48	PASS	AB=0.968;AC=41;AF=0.759;AN=54;BaseQRankSum=-7.902;DP=321;FS=1.407;HRun=0;HaplotypeScore=122.0814;InbreedingCoeff=0.1262;MQ=56.09;MQ0=8;MQRankSum=0.698;QD=11.77;ReadPosRankSum=-6.362;VQSLOD=2.5956;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:26:9.07:268,9,0	0/1:7,0:7:0.67:30,0,1	1/1:9,0:4:3.01:33,3,0	0/0:14,0:8:6.01:0,6,64	1/1:24,0:24:27.09:366,27,0	0/1:14,1:14:1.08:140,0,1	1/1:10,0:10:8.81:77,9,0	1/1:1,20:21:60.19:879,60,0	0/1:13,0:13:11.05:80,0,11	1/1:17,0:17:15.47:229,15,0	1/1:16,0:16:1.33:119,1,0	1/1:10,0:10:3.93:74,4,0	0/1:14,0:14:2.19:96,0,2	1/1:6,0:6:2.37:66,2,0	0/0:4,0:4:12.04:0,12,168	1/1:7,0:6:9.03:117,9,0	1/1:15,0:15:2.15:42,2,0	1/1:5,0:4:3.01:48,3,0	1/1:9,0:9:10.75:198,11,0	0/1:8,1:8:0.15:48,0,0	1/1:1,0:1:3.01:48,3,0	./.	0/1:9,0:9:0.63:31,0,1	1/1:2,3:5:9.03:143,9,0	1/1:19,0:19:6.63:164,7,0	0/1:14,1:14:4.66:109,0,5	1/1:13,1:12:1.88:93,2,0	0/0:4,0:4:1.09:0,1,4
chr10	26530642	.	TTCTG	T	984.25	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.864;DP=554;FS=2.509;HRun=0;HaplotypeScore=95.1442;InbreedingCoeff=0.9830;MQ=88.59;MQ0=0;MQRankSum=-7.036;QD=35.15;ReadPosRankSum=-2.042;VQSLOD=2.9086;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:45.15:0,45,1264	0/0:8,0:8:24.08:0,24,696	0/0:21,0:21:60.21:0,60,1629	0/0:20,0:20:48.62:0,49,1396	0/0:21,0:21:63.22:0,63,1825	0/0:29,0:29:87.28:0,87,2460	0/0:22,0:22:66.20:0,66,1775	1/1:2,15:17:50.83:705,51,0	0/0:23,0:23:69.24:0,69,2000	0/0:18,0:18:54.19:0,54,1551	0/0:23,0:23:69.23:0,69,1937	0/0:20,0:20:60.21:0,60,1739	0/0:42,0:42:99:0,126,3552	0/0:17,0:17:51.18:0,51,1419	0/0:26,0:26:78.27:0,78,2247	0/0:18,0:18:54.19:0,54,1529	1/1:2,9:11:30.07:401,30,0	0/0:17,0:17:41.96:0,42,1118	0/0:18,0:18:54.19:0,54,1436	0/0:22,0:22:66.23:0,66,1870	0/0:16,0:16:48.16:0,48,1389	0/0:12,0:12:36.12:0,36,1023	0/0:15,0:15:45.15:0,45,1287	0/0:15,0:15:45.15:0,45,1304	0/0:21,0:21:63.22:0,63,1790	0/0:27,0:27:81.28:0,81,2284	0/0:35,0:35:99:0,99,2825	0/0:5,0:5:12.04:0,12,348
chr10	26530647	.	AAC	A	589.60	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.457;DP=570;FS=1.653;HRun=0;HaplotypeScore=74.2392;InbreedingCoeff=0.9903;MQ=89.02;MQ0=0;MQRankSum=-7.614;QD=22.68;ReadPosRankSum=-1.093;VQSLOD=3.8758;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:45.11:0,45,827	0/0:8,0:8:24.08:0,24,488	0/0:24,0:24:72.23:0,72,1381	0/0:19,0:19:47.95:0,48,951	0/0:23,0:23:69.24:0,69,1386	0/0:28,0:28:84.29:0,84,1707	0/0:22,0:22:66.23:0,66,1341	1/1:0,15:15:45.10:458,45,0	0/0:23,0:23:69.24:0,69,1402	0/0:19,0:19:57.20:0,57,1158	0/0:23,0:23:69.24:0,69,1401	0/0:23,0:23:69.24:0,69,1402	0/0:41,0:41:99:0,123,2463	0/0:17,0:17:51.17:0,51,1011	0/0:27,0:27:81.28:0,81,1646	0/0:19,0:19:57.20:0,57,1146	1/1:2,9:11:27.04:253,27,0	0/0:18,0:18:45.15:0,45,904	0/0:19,0:19:57.20:0,57,1159	0/0:24,0:24:72.25:0,72,1439	0/0:17,0:17:51.18:0,51,1036	0/0:13,0:13:39.13:0,39,793	0/0:17,0:17:51.18:0,51,1036	0/0:16,0:16:48.16:0,48,975	0/0:21,0:21:63.22:0,63,1269	0/0:28,0:28:84.29:0,84,1700	0/0:34,0:34:96.33:0,96,1950	0/0:6,0:6:15.05:0,15,304
chr10	26532427	.	ATACT	A	24573.46	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=4.350;DP=603;FS=4.651;HRun=0;HaplotypeScore=110.3326;InbreedingCoeff=0.9583;MQ=69.71;MQ0=2;MQRankSum=-5.976;QD=44.52;ReadPosRankSum=1.950;VQSLOD=5.5922;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,19:23:57.11:983,57,0	1/1:1,9:10:24.08:442,24,0	0/0:11,0:12:25.48:0,25,631	0/0:12,0:12:26.89:0,27,557	1/1:1,36:37:99:1753,105,0	1/1:1,18:19:48.16:930,48,0	1/1:1,19:20:45.15:867,45,0	1/1:0,31:31:90.24:1542,90,0	1/1:0,21:21:51.17:984,51,0	1/1:0,22:22:66.17:1192,66,0	1/1:1,21:22:60.12:1083,60,0	1/1:2,30:32:78.27:1500,78,0	1/1:1,17:18:39.13:733,39,0	1/1:1,23:23:48.16:924,48,0	0/0:27,0:27:78.25:0,78,2068	1/1:1,21:22:39.13:753,39,0	1/1:0,20:20:42.14:810,42,0	1/1:4,10:14:22.32:409,22,0	1/1:0,21:21:63.15:1081,63,0	1/1:4,36:40:99:1944,108,0	1/1:2,8:10:18.06:327,18,0	1/1:1,22:22:60.03:1071,60,0	1/1:0,33:33:69.05:1269,69,0	1/1:0,17:17:36.12:678,36,0	1/1:3,17:18:39.13:733,39,0	1/1:1,24:25:72.24:1350,72,0	1/1:1,25:26:57.09:1099,57,0	1/1:0,2:2:6.02:116,6,0
chr10	26532759	.	C	CA	22195.75	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-10.575;DP=666;FS=11.495;HRun=3;HaplotypeScore=56.1723;InbreedingCoeff=0.9625;MQ=84.50;MQ0=0;MQRankSum=-7.918;QD=37.24;ReadPosRankSum=5.610;VQSLOD=4.1859;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,26:28:75.25:1050,75,0	1/1:0,9:9:27.09:378,27,0	0/0:22,0:22:63.15:0,63,732	0/0:18,0:18:54.06:0,54,628	1/1:5,36:41:99:1443,108,0	1/1:1,18:19:45.15:630,45,0	1/1:2,14:16:39.13:546,39,0	1/1:5,35:40:99:1352,99,0	1/1:2,11:13:27.09:378,27,0	1/1:1,29:30:87.21:1176,87,0	1/1:0,19:19:57.19:768,57,0	1/1:0,13:13:36.12:504,36,0	1/1:0,23:23:66.22:924,66,0	1/1:0,20:20:54.17:742,54,0	0/0:30,0:30:84.26:0,84,1008	1/1:1,28:29:36.24:930,36,0	1/1:0,13:13:33.11:462,33,0	1/1:0,11:11:30.10:420,30,0	1/1:1,13:14:42.14:585,42,0	1/1:4,52:56:99:2123,156,0	1/1:1,28:28:76.14:1052,76,0	1/1:0,28:28:75.21:1019,75,0	1/1:0,39:39:99:1554,111,0	1/1:0,10:10:30.10:420,30,0	1/1:2,29:30:84.28:1176,84,0	1/1:0,38:38:99:1553,111,0	1/1:2,23:25:66.22:924,66,0	1/1:0,2:2:6.02:84,6,0
chr10	26532762	.	A	AC	8061.88	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=11.568;DP=663;FS=5.964;HRun=2;HaplotypeScore=104.5228;InbreedingCoeff=0.8790;MQ=84.44;MQ0=0;MQRankSum=-7.586;QD=13.57;ReadPosRankSum=8.873;VQSLOD=3.4657;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:27:72.97:428,73,0	1/1:9,0:9:26.23:158,26,0	0/0:22,0:22:63.17:0,63,750	0/0:18,0:18:54.14:0,54,651	1/1:37,3:40:55.87:587,56,0	1/1:18,0:18:1.03:193,1,0	1/1:15,0:15:14.97:182,15,0	1/1:39,1:41:23.23:378,23,0	1/1:11,0:11:26.07:143,26,0	1/1:31,0:31:58.86:361,59,0	1/1:20,0:20:55.28:323,55,0	1/1:13,0:13:34.41:181,34,0	1/1:25,0:25:63.66:351,64,0	1/1:19,0:19:30.07:258,30,0	0/0:29,0:29:87.25:0,87,1053	1/1:30,0:30:32.41:324,32,0	1/1:12,0:12:32.17:189,32,0	1/1:11,0:11:29.10:165,29,0	1/1:15,0:15:23.24:174,23,0	1/1:53,0:55:89.30:813,89,0	1/1:28,0:27:52.68:383,53,0	1/1:28,0:28:54.36:387,54,0	1/1:39,0:39:99:652,108,0	1/1:10,0:10:29.03:162,29,0	1/1:31,0:30:36.96:388,37,0	1/1:39,0:39:84.28:529,84,0	1/1:25,0:25:17.93:320,18,0	1/1:2,0:2:5.80:32,6,0
chr10	26533195	.	C	CTG	23880.01	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-3.750;DP=558;FS=15.143;HRun=0;HaplotypeScore=78.3660;InbreedingCoeff=0.9899;MQ=82.11;MQ0=5;MQRankSum=-4.568;QD=47.57;ReadPosRankSum=3.408;VQSLOD=4.8636;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,24:25:66.23:1236,66,0	1/1:0,13:13:36.12:674,36,0	0/0:14,0:14:29.26:0,29,448	0/0:18,0:18:33.48:0,33,453	1/1:2,19:21:51.17:955,51,0	1/1:0,18:17:42.14:786,42,0	1/1:0,10:10:24.08:449,24,0	1/1:1,39:40:99:2177,120,0	1/1:0,20:19:45.15:843,45,0	1/1:0,21:21:63.22:1165,63,0	1/1:0,15:15:39.13:730,39,0	1/1:3,16:20:48.16:899,48,0	1/1:1,20:21:54.19:1010,54,0	1/1:2,18:20:48.16:879,48,0	0/0:24,0:24:72.22:0,72,1020	1/1:1,21:22:16.03:1023,16,0	1/1:1,20:20:51.17:955,51,0	1/1:0,7:7:21.07:393,21,0	1/1:1,15:16:45.15:836,45,0	1/1:4,26:30:75.26:1404,75,0	1/1:3,31:36:84.29:1573,84,0	1/1:3,13:16:30.10:562,30,0	1/1:0,24:24:50.50:954,51,0	1/1:0,20:20:60.21:1123,60,0	1/1:1,18:17:42.14:787,42,0	1/1:1,16:17:48.16:899,48,0	1/1:0,23:24:66.23:1236,66,0	1/1:1,5:6:18.06:332,18,0
chr10	26534065	.	T	TTG	22232.44	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-9.829;DP=570;FS=1.950;HRun=0;HaplotypeScore=52.9782;InbreedingCoeff=0.9904;MQ=78.83;MQ0=4;MQRankSum=-5.192;QD=42.92;ReadPosRankSum=4.039;VQSLOD=6.7258;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,20:23:60.21:1064,60,0	1/1:0,9:9:24.08:426,24,0	0/0:16,0:16:42.14:0,42,562	0/0:13,0:13:30.01:0,30,366	1/1:4,22:25:63.21:1084,63,0	1/1:4,25:29:60.16:1031,60,0	1/1:1,14:15:36.12:635,36,0	1/1:5,28:33:84.25:1413,84,0	1/1:2,15:16:39.13:692,39,0	1/1:1,27:28:81.25:1358,81,0	1/1:4,21:25:63.22:1113,63,0	1/1:2,13:16:33.11:586,33,0	1/1:0,23:22:60.21:1065,60,0	1/1:2,22:25:57.20:1011,57,0	0/0:23,0:23:60.18:0,60,807	1/1:1,21:23:60.21:1065,60,0	1/1:0,16:17:45.15:784,45,0	1/1:2,11:13:30.10:519,30,0	1/1:1,25:26:75.23:1254,75,0	1/1:2,25:27:69.15:1174,69,0	1/1:2,10:12:27.09:479,27,0	1/1:1,9:10:24.08:426,24,0	1/1:1,14:16:33.11:585,33,0	1/1:0,8:8:21.07:372,21,0	1/1:1,25:26:69.24:1225,69,0	1/1:2,26:27:75.24:1292,75,0	1/1:4,27:31:78.27:1379,78,0	1/1:3,6:11:14.97:200,15,0
chr10	26534376	.	C	CA	13847.58	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=0.437;DP=481;FS=1.545;HRun=7;HaplotypeScore=83.6882;InbreedingCoeff=0.8694;MQ=77.05;MQ0=0;MQRankSum=-4.549;QD=31.05;ReadPosRankSum=3.014;VQSLOD=4.9249;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,18:19:45.14:544,45,0	1/1:0,10:10:27.08:326,27,0	0/0:11,0:11:18.02:0,18,174	0/0:8,1:9:0.33:0,0,199	1/1:2,24:26:69.14:815,69,0	1/1:2,21:23:60.18:725,60,0	1/1:1,16:17:42.13:507,42,0	1/1:7,18:25:57.13:672,57,0	1/1:1,18:19:51.16:616,51,0	1/1:3,24:27:72.18:833,72,0	1/1:1,23:24:69.21:833,69,0	1/1:0,15:15:36.11:435,36,0	1/1:2,14:16:39.01:471,39,0	1/1:0,27:27:75.02:906,75,0	0/0:15,0:15:45.06:0,45,430	1/1:3,22:25:62.98:761,63,0	1/1:0,9:9:27.08:326,27,0	1/1:0,11:11:33.10:399,33,0	1/1:1,13:14:39.10:457,39,0	1/1:2,20:22:57.13:672,57,0	1/1:1,6:7:15.05:181,15,0	1/1:1,6:7:18.06:217,18,0	1/1:1,17:18:45.14:544,45,0	1/1:0,9:9:21.06:254,21,0	1/1:1,18:19:54.17:652,54,0	1/1:4,18:22:54.17:652,54,0	1/1:5,27:32:78.24:940,78,0	1/1:0,3:3:9.03:109,9,0
chr10	26535797	.	AT	A	1035.97	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.315;DP=580;FS=18.244;HRun=8;HaplotypeScore=58.8371;InbreedingCoeff=0.9727;MQ=80.63;MQ0=0;MQRankSum=-1.318;QD=19.55;ReadPosRankSum=-0.866;VQSLOD=2.0247;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:81.20:0,81,958	0/0:4,0:4:12.04:0,12,145	0/0:17,0:16:36.11:0,36,423	0/0:17,0:17:13.79:0,14,338	0/0:23,0:23:69.21:0,69,833	0/0:27,0:27:66.19:0,66,786	0/0:13,0:13:36.09:0,36,412	1/1:6,18:24:51.08:492,51,0	0/0:26,0:26:72.22:0,72,870	0/0:17,0:17:48.14:0,48,571	0/0:19,0:19:48.14:0,48,570	0/0:22,0:22:51.16:0,51,616	0/0:27,0:27:75.23:0,75,906	0/0:22,0:22:35.49:0,35,697	0/0:16,0:17:48.01:0,48,558	0/0:23,0:23:66.20:0,66,797	1/1:2,27:29:69.11:666,69,0	0/0:15,0:15:30.09:0,30,362	0/0:15,0:15:45.14:0,45,543	0/0:27,0:28:81.09:0,81,937	0/0:14,0:14:39.07:0,39,444	0/0:13,0:13:30.05:0,30,346	0/0:29,0:29:78.23:0,78,932	0/0:17,0:17:45.13:0,45,532	0/0:21,0:21:57.17:0,57,689	0/0:25,0:25:72.21:0,72,860	0/0:29,0:30:87.12:0,87,1017	0/0:9,0:9:27.08:0,27,326
chr10	26536048	.	GC	G	17085.39	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=11.237;DP=587;FS=0.000;HRun=1;HaplotypeScore=68.7079;InbreedingCoeff=0.9826;MQ=84.73;MQ0=0;MQRankSum=-5.118;QD=36.74;ReadPosRankSum=5.085;VQSLOD=5.0730;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,22:22:54.18:754,54,0	1/1:0,3:3:9.03:126,9,0	0/0:15,0:15:42.12:0,42,625	0/0:20,0:20:56.82:0,57,796	1/1:0,25:25:69.20:939,69,0	1/1:0,26:26:66.22:922,66,0	1/1:0,25:25:63.21:880,63,0	0/0:38,0:38:99:0,111,1724	1/1:1,19:20:51.17:699,51,0	1/1:1,33:33:99:1346,99,0	1/1:1,20:21:60.20:821,60,0	1/1:0,20:20:51.17:713,51,0	1/1:0,25:25:63.21:879,63,0	1/1:0,23:23:54.18:753,54,0	0/0:31,0:31:93.29:0,93,1434	1/1:0,27:27:72.20:984,72,0	0/0:18,0:18:54.18:0,54,854	1/1:0,6:6:18.06:251,18,0	1/1:0,10:10:30.09:405,30,0	1/1:0,27:27:72.07:955,72,0	1/1:0,12:12:33.11:461,33,0	1/1:0,12:12:30.10:419,30,0	1/1:0,24:24:69.19:942,69,0	1/1:1,21:22:57.19:796,57,0	1/1:0,29:29:78.26:1090,78,0	1/1:0,21:21:63.20:862,63,0	1/1:0,21:21:60.20:838,60,0	1/1:0,10:10:18.06:251,18,0
chr10	26536674	.	CT	C	6905.73	PASS	AB=1.000;AC=47;AF=0.839;AN=56;BaseQRankSum=1.926;DP=317;FS=24.219;HRun=7;HaplotypeScore=57.7826;InbreedingCoeff=0.8218;MQ=80.22;MQ0=0;MQRankSum=-1.647;QD=27.51;ReadPosRankSum=5.057;VQSLOD=3.1676;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,5:6:15.03:153,15,0	1/1:0,8:8:24.05:245,24,0	0/0:11,0:11:18.88:0,19,231	0/1:7,0:7:1.29:1,0,128	1/1:0,18:18:54.12:550,54,0	1/1:2,16:18:45.10:459,45,0	1/1:0,5:5:12.03:122,12,0	0/0:31,0:31:84.27:0,84,1056	1/1:0,6:6:15.03:153,15,0	1/1:0,11:11:33.08:337,33,0	1/1:0,15:15:45.10:459,45,0	1/1:1,5:6:12.03:122,12,0	1/1:0,7:7:18.04:184,18,0	1/1:1,11:12:33.07:336,33,0	0/0:10,0:10:30.08:0,30,364	1/1:0,10:10:30.07:306,30,0	0/0:14,0:14:30.09:0,30,365	1/1:3,5:8:12.03:122,12,0	1/1:1,17:18:51.11:515,51,0	1/1:0,11:11:33.08:337,33,0	1/1:1,0:1:3:25,3,0	1/1:0,3:3:9.02:92,9,0	1/1:0,18:18:54.12:551,54,0	1/1:0,2:2:6.01:61,6,0	1/1:0,21:21:60.14:612,60,0	1/1:0,14:14:42.10:429,42,0	1/1:0,18:18:51.12:520,51,0	1/1:0,8:8:21.05:214,21,0
chr10	26536713	.	AT	A	1859.16	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-3.679;DP=403;FS=33.267;HRun=1;HaplotypeScore=84.2655;InbreedingCoeff=0.9382;MQ=72.21;MQ0=0;MQRankSum=-2.039;QD=33.80;ReadPosRankSum=-4.358;VQSLOD=0.6030;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:6:15.05:0,15,224	0/0:8,0:8:24.07:0,24,339	0/0:13,1:14:19.91:0,20,348	0/0:4,0:4:8.76:0,9,104	0/0:17,0:17:51.16:0,51,739	0/0:22,0:22:63.17:0,63,918	0/0:7,0:7:18.04:0,18,249	1/1:0,35:35:99:1353,105,0	0/0:7,0:7:18.06:0,18,268	0/0:17,0:17:51.15:0,51,711	0/0:20,0:20:60.20:0,60,888	0/0:9,0:9:27.09:0,27,401	0/0:10,0:10:27.09:0,27,404	0/0:15,0:15:45.14:0,45,652	0/0:10,0:10:30.10:0,30,449	0/0:11,0:11:33.10:0,33,474	1/1:0,20:20:45.15:628,45,0	0/0:6,0:6:15:0,15,198	0/0:18,0:18:51.11:0,51,702	0/0:17,0:17:51.17:0,51,763	0/0:8,0:8:24.04:0,24,316	0/0:9,0:9:27.09:0,27,403	0/0:22,0:22:63.21:0,63,943	0/0:8,0:8:24.08:0,24,359	0/0:21,0:21:57.18:0,57,833	0/0:25,0:25:75.23:0,75,1084	0/0:26,0:26:75.20:0,75,1060	0/0:11,0:11:24.06:0,24,330
chr10	26537508	.	T	TA	18983.74	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=7.380;DP=549;FS=12.307;HRun=3;HaplotypeScore=84.4928;InbreedingCoeff=0.9966;MQ=80.05;MQ0=0;MQRankSum=-5.587;QD=38.43;ReadPosRankSum=2.403;VQSLOD=4.1732;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,8:8:21.07:294,21,0	1/1:0,13:13:36.12:504,36,0	0/0:17,0:17:44.32:0,44,566	0/0:9,0:9:24.07:0,24,276	1/1:2,27:29:75.25:1050,75,0	1/1:1,19:20:54.14:734,54,0	1/1:1,8:9:24.08:336,24,0	1/1:2,24:26:72.23:990,72,0	1/1:0,20:20:57.19:798,57,0	1/1:2,28:30:84.28:1174,84,0	1/1:1,18:19:54.18:756,54,0	1/1:2,23:25:63.21:881,63,0	1/1:0,14:14:42.14:588,42,0	1/1:2,28:30:84.21:1152,84,0	0/0:29,0:28:87.24:0,87,1021	1/1:1,27:28:81.27:1133,81,0	1/1:1,13:14:36.12:504,36,0	1/1:0,9:9:27.09:378,27,0	1/1:1,14:15:45.12:594,45,0	1/1:1,29:30:81.18:1087,81,0	1/1:0,14:14:39.13:546,39,0	1/1:0,16:16:45.15:630,45,0	1/1:0,24:24:60.07:840,60,0	1/1:0,16:16:48.16:672,48,0	1/1:1,24:25:72.24:1008,72,0	1/1:2,15:17:45.13:612,45,0	1/1:0,29:29:84.28:1176,84,0	1/1:0,14:14:39.13:546,39,0
chr10	26538538	.	GAC	G	4683.02	PASS	AB=0.994;AC=40;AF=0.714;AN=56;BaseQRankSum=-5.594;DP=524;FS=25.236;HRun=0;HaplotypeScore=84.9789;InbreedingCoeff=0.3372;MQ=61.43;MQ0=17;MQRankSum=4.789;QD=11.98;ReadPosRankSum=7.245;VQSLOD=2.7069;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:26:35.65:293,36,0	1/1:5,0:5:8.99:74,9,0	0/0:29,0:13:2.93:0,3,64	0/0:23,0:14:8.21:0,8,110	1/1:16,0:16:32.73:247,33,0	1/1:27,0:27:37.93:344,38,0	1/1:14,0:14:5.84:189,6,0	0/0:44,0:40:65.29:0,65,382	1/1:2,10:12:9.02:99,9,0	1/1:19,0:18:21.70:297,22,0	1/1:23,0:23:53.82:441,54,0	1/1:17,0:15:18.73:185,19,0	1/1:18,0:17:6.88:173,7,0	1/1:14,0:12:16.03:137,16,0	0/0:24,0:23:30.17:0,30,481	1/1:16,0:17:14.40:164,14,0	0/0:13,0:11:2.49:0,2,17	1/1:6,0:6:8.11:68,8,0	0/1:19,0:19:13.39:238,0,13	1/1:23,0:23:39.41:318,39,0	0/1:20,0:18:41.74:129,0,42	1/1:15,0:15:21.30:168,21,0	1/1:11,0:11:17.98:147,18,0	1/1:11,0:11:21.43:169,21,0	0/1:18,0:18:30.55:257,0,31	0/1:18,0:19:57.61:187,0,58	0/1:25,1:26:26.95:224,0,27	0/1:12,0:13:10.08:135,0,10
chr10	26538556	.	C	CAG	1076.94	PASS	AB=0.993;AC=31;AF=0.554;AN=56;BaseQRankSum=1.541;DP=501;FS=1.346;HRun=0;HaplotypeScore=96.5820;InbreedingCoeff=-0.1550;MQ=55.12;MQ0=19;MQRankSum=3.965;QD=2.70;ReadPosRankSum=-0.939;VQSLOD=1.9997;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:26:2.47:43,0,2	1/1:5,0:5:6.58:51,7,0	0/0:21,0:6:13.21:0,13,131	0/1:17,0:8:10.74:11,0,164	0/1:14,0:14:3.26:33,0,3	0/1:25,0:25:2.86:95,0,3	0/1:14,0:14:34.72:35,0,47	0/0:35,0:31:71.57:0,72,449	0/0:13,0:14:14.64:0,15,98	0/1:20,0:19:28.91:29,0,65	0/1:24,0:24:4.81:37,0,5	0/1:17,0:15:6.36:97,0,6	1/1:11,6:15:0.13:24,0,0	1/1:9,10:20:1.54:40,2,0	0/1:24,0:23:25.75:26,0,559	1/1:15,0:15:10.79:129,11,0	0/0:14,0:12:7.72:0,8,53	1/1:6,0:6:2.90:25,3,0	0/1:17,0:17:29.39:29,0,87	1/1:19,0:19:1.61:43,2,0	0/1:18,0:15:31.50:31,0,48	0/1:12,0:13:23.52:71,0,24	1/1:15,0:15:4.88:33,5,0	1/1:15,0:13:7.57:71,8,0	0/1:17,0:17:38.03:38,0,59	0/0:18,0:18:9.06:0,9,130	0/1:21,3:24:53.05:203,0,53	0/1:15,0:15:13.94:43,0,14
chr10	26541350	.	AATTGTAAAG	A	3620.60	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=3.754;DP=544;FS=39.229;HRun=0;HaplotypeScore=193.1803;InbreedingCoeff=0.9578;MQ=84.04;MQ0=0;MQRankSum=-6.945;QD=70.99;ReadPosRankSum=-3.254;VQSLOD=1.5565;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:66.18:0,66,2858	0/0:6,0:6:18.06:0,18,839	0/0:15,0:15:33.52:0,34,1616	0/0:18,0:18:51.08:0,51,1753	0/0:25,0:25:75.23:0,75,3167	0/0:28,0:28:84.27:0,84,3824	0/0:13,0:13:39.13:0,39,1767	1/1:1,42:43:99:3155,129,0	0/0:10,0:10:27.09:0,27,1259	0/0:21,0:21:63:0,63,2782	0/0:22,0:22:66.19:0,66,2691	0/0:23,0:23:69.21:0,69,3115	0/0:29,0:29:87.24:0,87,3642	0/0:30,0:30:90.31:0,90,4356	0/0:23,0:23:69.22:0,69,3130	0/0:13,0:13:36.12:0,36,1632	1/1:0,8:8:15.05:466,15,0	0/0:14,0:14:42.12:0,42,1898	0/0:24,0:24:72.25:0,72,3166	0/0:29,0:29:87.30:0,87,4128	0/0:23,0:23:69.19:0,69,3082	0/0:11,0:11:33.11:0,33,1509	0/0:15,0:15:42.14:0,42,1969	0/0:15,0:15:42.14:0,42,2026	0/0:14,0:14:42.14:0,42,2040	0/0:20,0:20:60.20:0,60,2562	0/0:26,0:26:75.26:0,75,3508	0/0:3,0:3:9.03:0,9,447
chr10	26541990	.	TGTAA	T	14589.06	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=14.151;DP=554;FS=1.746;HRun=0;HaplotypeScore=195.6489;InbreedingCoeff=0.9720;MQ=47.86;MQ0=2;MQRankSum=-12.610;QD=34.74;ReadPosRankSum=2.129;VQSLOD=5.1668;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,14:16:42.12:556,42,0	1/1:1,9:10:27.09:372,27,0	0/0:31,0:20:17.06:0,17,1369	0/0:23,0:20:59.85:0,60,1521	1/1:1,20:20:42.11:548,42,0	1/1:3,23:26:75.20:982,75,0	1/1:1,11:12:27.08:354,27,0	0/0:33,0:33:96.33:0,96,2767	1/1:1,21:22:60.16:784,60,0	1/1:4,21:25:69.21:949,69,0	1/1:2,15:17:36.10:466,36,0	1/1:2,19:19:54.17:728,54,0	1/1:0,30:29:81.24:1084,81,0	1/1:0,27:24:72.24:974,72,0	0/0:28,0:28:84.29:0,84,2428	1/1:2,25:26:72.22:962,72,0	0/0:19,0:19:57.20:0,57,1651	1/1:0,5:5:15.05:213,15,0	1/1:1,9:9:27.07:371,27,0	1/1:3,28:31:87.26:1152,87,0	1/1:0,7:4:9.50:123,10,0	1/1:0,12:12:27.09:366,27,0	1/1:1,17:18:48.16:653,48,0	1/1:1,9:10:18.06:243,18,0	1/1:0,19:19:51.17:700,51,0	1/1:5,18:23:61.74:806,62,0	1/1:3,24:27:78.23:1053,78,0	1/1:1,3:4:12.03:150,12,0
chr10	26541996	.	TAA	T	9398.56	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=14.901;DP=595;FS=2.752;HRun=3;HaplotypeScore=206.7015;InbreedingCoeff=0.9779;MQ=48.39;MQ0=1;MQRankSum=-13.997;QD=20.66;ReadPosRankSum=4.350;VQSLOD=3.0278;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,14:19:23.09:330,23,0	1/1:1,9:10:27.01:241,27,0	0/0:27,0:18:51.13:0,51,952	0/0:25,0:22:60.05:0,60,1054	1/1:2,20:21:39:343,39,0	1/1:5,23:28:60.78:613,61,0	1/1:0,11:11:24.01:213,24,0	0/0:38,0:38:99:0,111,2138	1/1:2,21:23:55.40:489,55,0	1/1:3,21:24:61.94:595,62,0	1/1:2,15:17:32.62:285,33,0	1/1:3,19:20:50.53:466,51,0	1/1:3,30:32:80.39:702,80,0	1/1:1,27:25:72.01:635,72,0	0/0:29,0:29:87.29:0,87,1680	1/1:2,25:26:65.56:598,66,0	0/0:20,0:20:60.21:0,60,1205	1/1:2,5:7:18.87:165,19,0	1/1:2,9:10:26.77:263,27,0	1/1:7,28:35:89.99:797,90,0	1/1:5,7:9:13.81:105,14,0	1/1:3,10:13:19.94:229,20,0	1/1:4,17:21:48.01:429,48,0	1/1:4,9:13:18:161,18,0	1/1:2,19:21:43.47:449,43,0	1/1:4,18:22:56.18:511,56,0	1/1:6,24:30:69.33:696,69,0	1/1:3,3:6:9.95:85,10,0
chr10	26542228	.	G	GA	20100.44	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-8.613;DP=716;FS=1.044;HRun=6;HaplotypeScore=66.9561;InbreedingCoeff=0.9955;MQ=63.84;MQ0=0;MQRankSum=-1.695;QD=30.92;ReadPosRankSum=3.738;VQSLOD=5.4210;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,29:31:74.05:907,74,0	1/1:1,10:11:21.07:264,21,0	0/0:19,0:16:42.54:0,43,437	0/0:14,0:12:33.02:0,33,321	1/1:5,30:35:78.20:956,78,0	1/1:5,24:29:60.16:737,60,0	1/1:1,23:24:54.17:679,54,0	1/1:2,28:30:81.07:981,81,0	1/1:3,16:19:42.13:527,42,0	1/1:3,29:32:84.25:1033,84,0	1/1:3,24:27:66.21:828,66,0	1/1:3,29:32:71.26:874,71,0	1/1:3,39:42:99:1464,117,0	1/1:0,23:23:57.18:717,57,0	0/0:33,0:33:99:0,99,1001	1/1:1,31:32:87.28:1094,87,0	1/1:2,26:28:38.62:800,39,0	1/1:0,18:18:51.16:642,51,0	1/1:2,15:17:42.13:528,42,0	1/1:3,38:41:99:1262,102,0	1/1:0,19:19:48.15:604,48,0	1/1:3,24:27:63.20:791,63,0	1/1:2,30:32:78.10:981,78,0	1/1:1,20:21:54.17:679,54,0	1/1:1,22:23:66.21:828,66,0	1/1:0,31:31:93.30:1170,93,0	1/1:0,17:17:42.13:528,42,0	1/1:0,9:9:18.06:226,18,0
chr10	26544939	.	C	CT	14255.30	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-8.874;DP=571;FS=10.517;HRun=7;HaplotypeScore=63.3195;InbreedingCoeff=0.9974;MQ=74.95;MQ0=0;MQRankSum=-2.846;QD=30.59;ReadPosRankSum=5.089;VQSLOD=4.3366;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,18:19:57.13:671,57,0	1/1:0,9:9:24.07:290,24,0	0/0:19,0:19:38.59:0,39,333	0/0:16,0:14:34.44:0,34,316	1/1:2,30:32:90.19:1054,90,0	1/1:4,17:21:48.14:570,48,0	1/1:3,14:17:30.09:362,30,0	0/0:28,0:27:65.72:0,66,633	1/1:0,20:20:51.16:616,51,0	1/1:4,22:26:66.20:797,66,0	1/1:1,15:16:42.13:507,42,0	1/1:1,13:14:39.12:471,39,0	1/1:6,23:29:60.18:725,60,0	1/1:1,14:15:42.13:507,42,0	0/0:24,0:24:66.10:0,66,637	1/1:3,21:24:59.86:724,60,0	0/0:18,0:18:48.07:0,48,464	1/1:3,18:21:51.16:616,51,0	1/1:1,15:16:45.14:544,45,0	1/1:2,23:25:69.17:817,69,0	1/1:5,10:15:21.06:254,21,0	1/1:3,19:22:57.17:684,57,0	1/1:1,25:26:72.22:870,72,0	1/1:2,8:10:24.07:290,24,0	1/1:0,28:28:84.26:1015,84,0	1/1:2,24:26:72.20:856,72,0	1/1:3,22:25:59.92:725,60,0	1/1:1,9:10:24.07:290,24,0
chr10	26546016	.	T	TA	19454.13	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-8.249;DP=723;FS=8.022;HRun=4;HaplotypeScore=63.2170;InbreedingCoeff=0.9828;MQ=57.89;MQ0=4;MQRankSum=3.532;QD=33.72;ReadPosRankSum=3.409;VQSLOD=5.4003;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,32:36:48.34:1033,48,0	1/1:1,12:13:39.13:527,39,0	0/0:17,0:6:18.05:0,18,204	0/0:16,1:9:18.05:0,18,204	1/1:2,26:28:41.57:903,42,0	1/1:2,30:32:81.27:1108,81,0	1/1:3,20:23:45.15:615,45,0	0/0:38,0:28:72.19:0,72,808	1/1:3,22:25:60.20:820,60,0	1/1:3,26:29:81.23:1062,81,0	1/1:3,20:23:45.15:614,45,0	1/1:1,26:27:66.22:898,66,0	1/1:1,39:40:99:1395,102,0	1/1:2,32:34:90.29:1214,90,0	0/0:36,0:36:96.19:0,96,1062	1/1:2,28:31:75.25:1016,75,0	0/0:37,0:37:99:0,108,1193	1/1:2,19:21:54.18:738,54,0	1/1:1,15:15:45.13:599,45,0	1/1:2,22:24:63.17:841,63,0	1/1:2,26:28:63.21:861,63,0	1/1:0,23:23:63.21:861,63,0	1/1:0,23:23:60.20:820,60,0	1/1:1,19:20:54.18:738,54,0	1/1:1,25:26:60.20:821,60,0	1/1:0,19:19:57.19:779,57,0	1/1:2,31:31:78.26:1066,78,0	1/1:0,3:3:9.03:123,9,0
chr10	26548648	.	C	CTCTT	6553.32	PASS	AB=0.950;AC=39;AF=0.696;AN=56;BaseQRankSum=-3.867;DP=543;FS=2.369;HRun=0;HaplotypeScore=117.4877;InbreedingCoeff=0.4957;MQ=50.88;MQ0=43;MQRankSum=4.156;QD=15.20;ReadPosRankSum=1.705;VQSLOD=4.1823;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:9,17:22:2.90:0,3,16	1/1:14,0:14:17.17:328,17,0	0/0:9,0:5:12:0,12,108	0/0:24,0:12:25.05:0,25,215	0/1:22,0:20:29.39:189,0,29	1/1:15,1:14:27.99:325,28,0	1/1:19,0:15:24.70:282,25,0	0/0:17,0:14:29.89:0,30,243	1/1:17,0:15:20.28:211,20,0	0/1:20,0:19:56.39:357,0,56	1/1:13,1:12:21.45:185,21,0	1/1:22,3:19:17.43:269,17,0	1/1:27,0:27:13.48:319,13,0	1/1:27,1:26:41.36:473,41,0	0/0:22,0:21:26.60:0,27,275	1/1:23,0:22:43.40:401,43,0	0/0:14,0:10:11.80:0,12,80	0/1:4,2:3:13.79:74,0,14	1/1:17,0:16:32.07:304,32,0	0/1:32,0:31:3.50:386,0,3	1/1:20,0:16:1.36:218,1,0	1/1:23,0:22:10.08:215,10,0	1/1:14,1:13:23.06:227,23,0	0/1:10,0:8:6.77:48,0,7	1/1:20,2:21:41.31:462,41,0	1/1:20,0:17:13.13:295,13,0	1/1:18,2:19:24.20:648,24,0	1/1:20,0:17:2.34:337,2,0
chr10	26548650	.	C	CTT	5961.10	PASS	AB=0.939;AC=37;AF=0.661;AN=56;BaseQRankSum=-3.605;DP=534;FS=3.871;HRun=1;HaplotypeScore=104.4474;InbreedingCoeff=0.4301;MQ=49.15;MQ0=45;MQRankSum=4.943;QD=13.90;ReadPosRankSum=3.954;VQSLOD=2.3040;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:22:2.94:0,3,18	1/1:15,0:14:14.67:294,15,0	0/0:8,0:4:12:0,12,108	0/0:22,0:11:25.77:0,26,216	1/1:23,0:21:34.03:274,34,0	1/1:16,0:14:26.41:293,26,0	1/1:20,0:16:12.87:214,13,0	0/0:15,0:11:29.89:0,30,243	1/1:18,0:15:18:204,18,0	0/1:20,0:19:78.12:301,0,78	1/1:15,0:13:20.99:207,21,0	1/1:24,1:19:15.17:264,15,0	0/1:27,0:27:37.34:326,0,37	1/1:26,1:25:42.53:386,43,0	0/0:20,0:19:26.58:0,27,242	1/1:24,0:23:41.47:373,41,0	0/0:14,0:10:11.67:0,12,66	0/1:6,0:3:13.80:41,0,14	0/1:4,12:15:0.35:254,0,0	0/1:32,0:31:27.74:322,0,28	1/1:20,0:16:8.67:242,9,0	1/1:22,0:21:8.47:231,8,0	1/1:13,2:13:21.50:227,21,0	1/1:10,0:8:10.14:63,10,0	1/1:22,0:21:40.92:432,41,0	0/1:16,0:13:7.47:212,0,7	0/1:20,0:19:3.43:442,0,3	1/1:20,0:17:19.25:358,19,0
chr10	26548679	.	T	TCACACA	1186.90	PASS	AB=1.000;AC=15;AF=0.278;AN=54;BaseQRankSum=3.928;DP=485;FS=68.894;HRun=0;HaplotypeScore=150.5950;InbreedingCoeff=-0.2850;MQ=37.77;MQ0=47;MQRankSum=-2.054;QD=4.19;ReadPosRankSum=0.442;VQSLOD=0.2520;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:20:6:94,6,0	0/0:9,0:8:2.78:0,3,156	0/0:4,0:1:3.01:0,3,51	./.	0/1:21,0:20:5.03:5,0,241	0/0:16,0:12:12.41:0,12,188	0/1:21,0:17:30.74:31,0,183	0/0:15,0:9:26.98:0,27,340	0/1:15,0:12:80.92:92,0,81	0/1:17,0:15:99:262,0,308	0/1:20,0:17:34.50:35,0,50	0/0:24,0:17:14.78:0,15,258	0/1:19,0:19:29.95:30,0,238	0/1:31,0:29:32.80:33,0,143	0/0:19,0:18:22.40:0,22,444	0/1:23,0:22:88.19:88,0,206	0/0:17,0:13:15.04:0,15,181	0/0:7,0:4:5.99:0,6,83	0/1:8,0:8:36.33:36,0,211	0/1:28,0:27:79.90:157,0,80	0/0:16,0:11:8.71:0,9,159	0/1:20,0:16:93.01:105,0,93	0/0:18,0:13:8.38:0,8,122	0/0:12,0:10:3.48:0,3,74	0/0:17,2:20:16.98:0,17,223	0/1:17,0:15:99:126,0,126	0/1:19,0:18:99:243,0,227	0/0:17,0:14:25.90:0,26,417
chr10	26548690	.	C	CACACACAC	5401.97	PASS	AB=1.000;AC=47;AF=0.904;AN=52;BaseQRankSum=-0.827;DP=565;FS=0.000;HRun=0;HaplotypeScore=172.9171;InbreedingCoeff=0.1402;MQ=38.29;MQ0=41;MQRankSum=-1.684;QD=10.65;ReadPosRankSum=-0.739;VQSLOD=3.7878;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:23:12.02:268,12,0	1/1:10,0:9:6:72,6,0	0/1:12,0:5:23.80:24,0,67	./.	1/1:27,0:26:9.01:148,9,0	1/1:18,0:14:3.46:25,3,0	1/1:23,0:20:9.44:187,9,0	0/1:21,0:16:10.80:92,0,11	1/1:16,0:13:12.03:268,12,0	1/1:24,0:22:44.36:920,44,0	1/1:22,0:19:5.68:157,6,0	1/1:25,0:18:5.07:56,5,0	1/1:16,5:22:11.84:141,12,0	1/1:29,0:27:5.04:78,5,0	0/0:21,0:21:17.66:0,18,372	1/1:26,0:25:21.02:339,21,0	0/1:19,0:15:1.34:56,0,1	1/1:9,0:7:2.99:24,3,0	1/1:14,0:14:26.26:335,26,0	1/1:32,0:32:17.19:362,17,0	./.	1/1:25,0:20:5.79:171,6,0	1/1:27,0:22:11.62:134,12,0	1/1:14,0:12:2.54:33,3,0	1/1:20,0:20:10.04:132,10,0	1/1:19,0:17:40.68:719,41,0	1/1:17,0:16:26.98:622,27,0	1/1:9,0:8:3.01:36,3,0
chr10	26549512	.	A	AT	20514.81	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-7.614;DP=636;FS=3.567;HRun=5;HaplotypeScore=49.8713;InbreedingCoeff=0.9849;MQ=75.36;MQ0=0;MQRankSum=-4.603;QD=34.31;ReadPosRankSum=4.707;VQSLOD=4.8434;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,18:19:48.16:632,48,0	1/1:0,9:9:24.08:316,24,0	0/0:16,0:16:38.97:0,39,393	0/0:8,0:7:12:0,12,115	1/1:2,26:28:78.21:1007,78,0	1/1:1,25:26:72.23:947,72,0	1/1:5,18:23:48.11:612,48,0	1/1:1,37:38:99:1443,111,0	1/1:0,23:23:63.20:829,63,0	1/1:2,26:28:78.23:1010,78,0	1/1:0,20:20:60.20:790,60,0	1/1:2,19:21:51.17:671,51,0	1/1:1,33:34:87.28:1145,87,0	1/1:0,11:11:30.10:395,30,0	0/0:14,0:14:33.06:0,33,346	1/1:1,16:17:48.16:632,48,0	1/1:4,21:25:51.17:671,51,0	1/1:3,17:20:52.41:670,52,0	1/1:0,19:19:57.18:737,57,0	1/1:1,33:34:87.28:1145,87,0	1/1:1,8:9:21.07:276,21,0	1/1:3,22:25:57.19:750,57,0	1/1:3,21:25:66.21:864,66,0	1/1:1,8:9:21.07:276,21,0	1/1:1,26:27:75.24:987,75,0	1/1:5,34:38:99:1381,105,0	1/1:1,41:41:99:1461,111,0	1/1:3,24:27:66.21:868,66,0
chr10	26550132	.	A	AT	11106.04	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=6.913;DP=490;FS=2.571;HRun=9;HaplotypeScore=114.5512;InbreedingCoeff=0.8849;MQ=74.59;MQ0=0;MQRankSum=-2.166;QD=26.32;ReadPosRankSum=6.102;VQSLOD=3.4963;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,17:18:48.13:531,48,0	1/1:0,10:10:27.07:299,27,0	0/0:8,0:9:20.02:0,20,158	0/0:11,0:11:0.48:0,0,103	1/1:2,20:22:57.15:629,57,0	1/1:3,17:20:45.12:498,45,0	1/1:5,13:18:10.30:339,10,0	0/0:32,0:32:38.54:0,39,493	1/1:7,17:24:28.27:565,28,0	1/1:2,14:15:42.10:456,42,0	1/1:4,25:29:72.02:764,72,0	1/1:3,16:20:45.12:496,45,0	1/1:3,23:26:66.18:730,66,0	1/1:3,14:17:36.10:398,36,0	0/0:13,0:13:38.99:0,39,339	1/1:0,13:13:33.09:365,33,0	0/0:3,0:3:8.98:0,9,75	1/1:1,2:4:6.02:66,6,0	1/1:4,17:24:34.30:584,34,0	1/1:4,24:28:69.19:761,69,0	1/1:1,13:14:16.10:405,16,0	1/1:0,9:9:27.07:299,27,0	1/1:2,10:12:30.08:332,30,0	1/1:2,9:11:27.07:299,27,0	1/1:2,23:25:60.16:664,60,0	1/1:4,20:25:63:678,63,0	1/1:3,25:29:66.17:722,66,0	1/1:1,5:8:19.30:227,19,0
chr10	26550345	.	A	AT	27153.72	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-11.668;DP=787;FS=3.290;HRun=2;HaplotypeScore=66.7607;InbreedingCoeff=0.9935;MQ=76.93;MQ0=0;MQRankSum=-6.512;QD=38.57;ReadPosRankSum=5.936;VQSLOD=5.0592;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:0,33:33:81.26:1149,81,0	1/1:1,5:6:15.05:216,15,0	0/0:18,0:18:54.14:0,54,634	0/0:23,0:23:54.07:0,54,638	1/1:2,36:38:99:1401,99,0	1/1:0,37:37:99:1469,102,0	1/1:2,24:26:69.23:994,69,0	1/1:1,31:32:90.30:1295,90,0	1/1:1,30:31:78.26:1123,78,0	1/1:2,36:38:99:1535,108,0	1/1:1,28:29:75.25:1080,75,0	1/1:1,33:34:78.26:1123,78,0	1/1:1,44:45:99:1815,126,0	1/1:2,29:31:87.29:1240,87,0	0/0:42,0:42:99:0,123,1510	1/1:1,39:40:99:1599,111,0	1/1:0,19:19:51.17:734,51,0	1/1:0,9:8:24.08:345,24,0	1/1:1,22:23:69.22:977,69,0	1/1:0,25:25:72.24:1037,72,0	1/1:3,42:45:99:1728,120,0	1/1:1,12:13:33.11:475,33,0	1/1:1,16:17:42.14:605,42,0	1/1:3,26:29:66.22:950,66,0	1/1:1,21:22:63.21:907,63,0	1/1:0,25:25:75.25:1080,75,0	1/1:2,40:43:99:1673,117,0	1/1:0,14:14:42.14:605,42,0
chr10	26552113	.	TG	T	16427.15	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=10.126;DP=551;FS=7.869;HRun=1;HaplotypeScore=66.1534;InbreedingCoeff=0.9985;MQ=96.73;MQ0=0;MQRankSum=-6.949;QD=37.85;ReadPosRankSum=8.419;VQSLOD=3.8929;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,16:16:39.13:545,39,0	1/1:0,7:7:21.07:294,21,0	0/0:29,0:29:76.61:0,77,1154	0/0:25,0:25:67.92:0,68,951	1/1:0,36:36:99:1442,108,0	1/1:0,23:23:54.18:755,54,0	1/1:0,14:14:39.13:540,39,0	0/0:30,0:30:87.21:0,87,1317	1/1:0,11:11:30.10:419,30,0	1/1:0,15:15:41.65:567,42,0	1/1:0,15:15:45.15:625,45,0	1/1:0,16:16:45.15:629,45,0	1/1:0,23:23:63.21:877,63,0	1/1:0,18:18:48.16:670,48,0	0/0:14,0:14:42.14:0,42,669	1/1:0,24:24:66.22:923,66,0	0/0:19,0:19:57.16:0,57,871	1/1:0,10:10:27.09:377,27,0	1/1:0,14:14:42.14:587,42,0	1/1:0,21:21:63.18:860,63,0	1/1:1,18:19:41.97:559,42,0	1/1:0,16:16:48.16:671,48,0	1/1:0,16:16:42.08:564,42,0	1/1:0,12:12:30.10:419,30,0	1/1:0,21:21:51.17:713,51,0	1/1:0,26:26:75.25:1048,75,0	1/1:0,39:39:99:1592,114,0	1/1:0,22:22:54.18:754,54,0
chr10	26553910	.	A	AATT	20661.91	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-0.459;DP=407;FS=0.000;HRun=0;HaplotypeScore=55.4955;InbreedingCoeff=0.8722;MQ=69.77;MQ0=0;MQRankSum=-2.434;QD=55.84;ReadPosRankSum=0.913;VQSLOD=6.7695;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,7:7:18.06:414,18,0	1/1:0,7:7:21.07:478,21,0	0/0:8,0:8:12.04:0,12,197	0/0:9,0:8:11.98:0,12,137	1/1:2,25:28:72.19:1598,72,0	1/1:1,16:17:42.14:966,42,0	1/1:0,7:7:18.06:412,18,0	1/1:2,27:31:90.26:1865,90,0	1/1:1,18:19:51.18:1163,51,0	1/1:0,20:20:60.21:1356,60,0	1/1:4,24:28:63.22:1446,63,0	1/1:0,5:5:15.05:343,15,0	1/1:0,13:14:33.11:756,33,0	1/1:0,8:9:24.08:552,24,0	0/0:20,0:20:60.21:0,60,1019	1/1:0,12:13:27.09:619,27,0	1/1:0,12:12:24.08:548,24,0	1/1:2,5:7:9.03:207,9,0	1/1:0,19:19:57.18:1208,57,0	1/1:2,23:26:72.18:1553,72,0	1/1:1,3:5:6.02:138,6,0	1/1:0,4:4:8.99:158,9,0	1/1:3,8:11:27.08:573,27,0	1/1:0,6:6:9.03:207,9,0	1/1:1,16:18:36.12:830,36,0	1/1:0,16:16:48.16:1078,48,0	1/1:1,22:25:54.15:1237,54,0	1/1:1,15:16:42.14:957,42,0
chr10	26556726	.	G	GAAAAC	31465.39	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-11.136;DP=586;FS=4.828;HRun=0;HaplotypeScore=81.5283;InbreedingCoeff=0.9906;MQ=78.71;MQ0=0;MQRankSum=-7.115;QD=62.31;ReadPosRankSum=5.676;VQSLOD=5.5718;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,25:35:54.19:1571,54,0	1/1:0,6:6:15.05:448,15,0	0/0:27,0:27:38.91:0,39,773	0/0:24,0:25:42.55:0,43,967	1/1:3,20:25:57.13:1628,57,0	1/1:2,13:15:39.13:1164,39,0	1/1:3,7:10:19.62:508,20,0	1/1:13,12:25:36.11:936,36,0	1/1:5,9:14:24.08:716,24,0	1/1:4,18:21:51.17:1469,51,0	1/1:3,21:24:63.22:1879,63,0	1/1:2,13:15:30.10:895,30,0	1/1:3,21:25:48.16:1429,48,0	1/1:4,16:22:51.18:1503,51,0	0/0:29,0:29:84.23:0,84,1540	1/1:1,17:20:42.14:1251,42,0	1/1:4,16:20:45.15:1343,45,0	1/1:3,13:18:36.12:1045,36,0	1/1:7,12:19:36.12:961,36,0	1/1:2,20:22:57.20:1648,57,0	1/1:1,11:12:27.09:727,27,0	1/1:1,11:13:33.11:984,33,0	1/1:2,25:28:66.23:1969,66,0	1/1:0,18:21:42.14:1254,42,0	1/1:5,16:22:39.13:1165,39,0	1/1:6,20:27:66.19:1837,66,0	1/1:5,28:34:75.26:2237,75,0	1/1:1,9:10:30.10:895,30,0
chr10	26557695	.	AGGG	A	11101.54	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-0.723;DP=503;FS=6.182;HRun=6;HaplotypeScore=79.9235;InbreedingCoeff=0.7932;MQ=65.25;MQ0=46;MQRankSum=-1.132;QD=26.75;ReadPosRankSum=1.967;VQSLOD=1.8237;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:27:69.59:926,70,0	1/1:4,0:4:12.04:181,12,0	0/0:43,0:14:32.94:0,33,585	0/0:21,0:14:30.68:0,31,438	1/1:4,19:22:54.09:631,54,0	1/1:19,0:16:45.08:633,45,0	1/1:14,0:13:35.93:467,36,0	1/1:8,15:20:45.09:628,45,0	1/1:12,0:11:29.99:400,30,0	1/1:2,19:21:51.40:655,51,0	1/1:1,13:14:36.08:425,36,0	1/1:1,15:15:3.01:39,3,0	1/1:12,0:9:24.08:370,24,0	1/1:15,0:12:36.12:557,36,0	0/0:24,0:22:63.09:0,63,1024	1/1:14,0:14:39.06:539,39,0	1/1:2,17:19:4.26:40,4,0	1/1:9,1:9:21.07:319,21,0	1/1:2,15:17:42.03:507,42,0	1/1:22,0:22:53.90:686,54,0	1/1:7,0:6:12.10:180,12,0	1/1:1,18:18:51.11:606,51,0	1/1:3,17:20:2.57:37,3,0	1/1:17,2:15:38.70:557,39,0	1/1:21,0:20:54.16:796,54,0	1/1:3,16:16:42.15:591,42,0	1/1:2,13:13:5.70:47,6,0	1/1:11,0:7:21.04:286,21,0
chr10	26557697	.	GGGGGAAGAAGAAGAA	G	10947.81	PASS	AB=1.000;AC=49;AF=0.875;AN=56;BaseQRankSum=-1.242;DP=485;FS=4.779;HRun=0;HaplotypeScore=159.5082;InbreedingCoeff=0.6223;MQ=63.31;MQ0=46;MQRankSum=1.542;QD=27.37;ReadPosRankSum=4.459;VQSLOD=3.5080;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:26:67.65:922,68,0	1/1:4,0:4:12.04:181,12,0	0/0:41,0:12:32.94:0,33,585	0/0:20,0:13:28.70:0,29,432	1/1:20,0:19:54.09:631,54,0	1/1:18,0:15:45.08:633,45,0	1/1:14,0:13:35.93:467,36,0	1/1:20,0:17:45.09:628,45,0	1/1:12,0:11:25.21:377,25,0	1/1:19,0:19:49.97:647,50,0	1/1:13,0:13:36.08:425,36,0	1/1:16,0:15:3.01:39,3,0	1/1:12,0:9:24.08:370,24,0	0/1:16,0:13:18.38:518,0,18	0/0:24,0:22:63.17:0,63,1062	1/1:13,0:13:39.06:539,39,0	1/1:19,0:17:4.26:40,4,0	1/1:11,0:10:1.22:296,1,0	1/1:16,0:16:42.03:507,42,0	1/1:0,22:22:53.36:685,53,0	1/1:7,0:6:9.38:175,9,0	1/1:19,0:18:51.11:606,51,0	1/1:18,0:18:2.36:36,2,0	1/1:19,0:15:38.18:555,38,0	1/1:20,0:19:54.16:796,54,0	1/1:19,0:16:36.24:565,36,0	1/1:15,0:13:5.21:46,5,0	1/1:11,0:7:21.01:263,21,0
chr10	26559669	.	T	TTTG	22326.13	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-7.555;DP=505;FS=2.003;HRun=0;HaplotypeScore=67.6699;InbreedingCoeff=0.9535;MQ=79.25;MQ0=0;MQRankSum=-3.670;QD=54.45;ReadPosRankSum=4.986;VQSLOD=7.0788;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,7:8:15.05:324,15,0	1/1:5,12:17:36.12:779,36,0	0/0:13,0:13:36.12:0,36,544	0/0:15,0:15:36.07:0,36,517	1/1:5,23:28:69.23:1400,69,0	1/1:2,24:27:75.26:1599,75,0	1/1:1,12:14:39.13:817,39,0	0/0:27,0:27:72.23:0,72,1087	1/1:1,15:16:45.15:975,45,0	1/1:3,21:24:63.22:1364,63,0	1/1:3,24:27:75.26:1583,75,0	1/1:2,10:13:30.10:649,30,0	1/1:2,20:24:57.20:1228,57,0	1/1:1,14:16:42.14:909,42,0	0/0:28,0:28:78.25:0,78,1196	1/1:2,12:15:30.10:650,30,0	0/0:12,0:12:36.12:0,36,563	1/1:3,8:11:21.07:454,21,0	1/1:0,10:10:30.10:633,30,0	1/1:3,14:18:45.15:946,45,0	1/1:3,9:12:27.09:542,27,0	1/1:0,1:1:3.01:65,3,0	1/1:0,7:7:18.06:389,18,0	1/1:1,16:17:42.14:909,42,0	1/1:3,12:16:36.12:752,36,0	1/1:5,24:29:81.28:1703,81,0	1/1:4,38:43:99:2552,123,0	1/1:0,17:17:51.18:1103,51,0
chr10	26559839	.	G	GT	14124.21	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-9.792;DP=505;FS=0.000;HRun=5;HaplotypeScore=46.6432;InbreedingCoeff=0.9931;MQ=76.36;MQ0=0;MQRankSum=-2.305;QD=33.63;ReadPosRankSum=6.934;VQSLOD=3.9484;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,13:13:36.12:474,36,0	1/1:0,7:7:21.07:276,21,0	0/0:17,0:17:42.10:0,42,447	0/0:10,0:10:23.99:0,24,235	1/1:3,28:31:75.24:987,75,0	1/1:2,20:22:60.20:789,60,0	1/1:3,10:13:27.09:355,27,0	0/0:28,0:28:78.18:0,78,829	1/1:0,20:20:60.20:790,60,0	1/1:3,20:23:63.20:829,63,0	1/1:7,24:31:87.24:1098,87,0	1/1:1,13:14:30.10:395,30,0	1/1:0,16:16:48.16:631,48,0	1/1:0,14:14:36.12:474,36,0	0/0:17,0:17:42.10:0,42,451	1/1:2,18:20:45.15:592,45,0	0/0:13,0:13:29.13:0,29,306	1/1:1,7:8:14.17:231,14,0	1/1:0,25:24:72.19:915,72,0	1/1:1,12:13:36.12:474,36,0	1/1:2,13:15:33.11:434,33,0	1/1:0,12:12:30.10:395,30,0	1/1:1,15:16:45.15:592,45,0	1/1:3,11:14:30.10:395,30,0	1/1:0,21:21:57.19:750,57,0	1/1:1,18:19:54.18:710,54,0	1/1:3,35:37:84.17:1105,84,0	1/1:0,15:15:33.11:434,33,0
chr10	26560763	.	TC	T	1210	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.965;DP=572;FS=6.351;HRun=2;HaplotypeScore=76.1442;InbreedingCoeff=0.9902;MQ=79.50;MQ0=0;MQRankSum=-9.439;QD=29.51;ReadPosRankSum=-1.886;VQSLOD=2.3666;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:60.20:0,60,896	0/0:5,0:5:15.04:0,15,207	0/0:11,0:11:30.07:0,30,416	0/0:18,0:17:45.15:0,45,609	0/0:30,0:30:90.29:0,90,1327	0/0:24,0:24:72.17:0,72,1037	0/0:17,0:17:51.16:0,51,744	1/1:2,30:32:87.27:1043,87,0	0/0:20,0:20:60.20:0,60,899	0/0:27,0:27:81.27:0,81,1213	0/0:28,0:28:78.24:0,78,1128	0/0:16,0:16:48.14:0,48,679	0/0:24,0:24:69.23:0,69,1033	0/0:22,0:22:66.22:0,66,989	0/0:16,0:16:48.15:0,48,701	0/0:24,0:24:72.24:0,72,1079	1/1:0,9:9:24.07:288,24,0	0/0:11,0:11:30.10:0,30,449	0/0:15,0:15:42.14:0,42,629	0/0:33,0:33:96.32:0,96,1431	0/0:23,0:23:69.22:0,69,1011	0/0:21,0:21:57.19:0,57,853	0/0:20,0:20:57.16:0,57,812	0/0:13,0:13:39.13:0,39,585	0/0:21,0:21:57.18:0,57,834	0/0:30,0:30:90.29:0,90,1319	0/0:29,0:29:87.25:0,87,1278	0/0:13,0:13:39.13:0,39,584
chr10	26560832	.	TTA	T	1590.91	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-7.394;DP=634;FS=0.000;HRun=0;HaplotypeScore=154.7019;InbreedingCoeff=0.9956;MQ=92.88;MQ0=0;MQRankSum=-2.880;QD=35.35;ReadPosRankSum=-3.838;VQSLOD=3.9448;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:66.19:0,66,1156	0/0:9,0:9:27.09:0,27,499	0/0:28,0:28:80.71:0,81,1345	0/0:26,0:26:78.12:0,78,1327	0/0:27,0:27:81.23:0,81,1396	0/0:32,0:32:96.31:0,96,1738	0/0:25,0:25:66.23:0,66,1215	1/1:3,32:35:99:1300,99,0	0/0:21,0:21:57.18:0,57,997	0/0:25,0:25:75.24:0,75,1336	0/0:23,0:23:69.19:0,69,1234	0/0:18,0:18:54.16:0,54,937	0/0:30,0:30:90.21:0,90,1476	0/0:23,0:23:69.24:0,69,1268	0/0:23,0:23:69.22:0,69,1275	0/0:30,0:30:90.26:0,90,1527	1/1:0,10:10:27.09:413,27,0	0/0:11,0:10:24.08:0,24,407	0/0:17,0:17:51.17:0,51,909	0/0:28,0:28:81.23:0,81,1380	0/0:24,0:24:72.22:0,72,1277	0/0:23,0:23:69.24:0,69,1268	0/0:15,0:15:45.15:0,45,833	0/0:18,0:18:51.14:0,51,850	0/0:22,0:22:66.21:0,66,1189	0/0:31,0:31:90.29:0,90,1601	0/0:30,0:30:90.26:0,90,1557	0/0:7,0:7:20.66:0,21,337
chr10	26561234	.	T	TTC	1250.15	PASS	AB=1.000;AC=6;AF=0.107;AN=56;BaseQRankSum=7.382;DP=648;FS=2.136;HRun=0;HaplotypeScore=90.4900;InbreedingCoeff=0.5707;MQ=71.75;MQ0=2;MQRankSum=-3.364;QD=11.26;ReadPosRankSum=-5.824;VQSLOD=1.7695;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:57.18:0,57,697	0/0:9,0:9:21.07:0,21,257	0/0:35,0:29:21.95:0,22,315	0/1:34,0:22:16.43:16,0,401	0/0:31,0:33:77.92:0,78,907	0/0:25,0:27:62.70:0,63,679	0/0:26,0:27:69.05:0,69,821	1/1:21,15:40:26.71:820,27,0	0/0:23,0:24:56.99:0,57,660	0/0:15,0:15:33.10:0,33,403	0/0:24,0:24:63.20:0,63,770	0/0:15,0:15:39.11:0,39,465	0/0:32,0:33:78.08:0,78,929	0/0:20,0:20:39.11:0,39,466	0/0:22,0:22:45.14:0,45,550	0/0:23,0:23:48.15:0,48,587	1/1:10,9:19:2.63:529,3,0	0/0:7,0:7:18.06:0,18,220	0/0:24,0:24:39.11:0,39,464	0/0:27,0:29:68.86:0,69,780	0/0:16,0:16:42.13:0,42,513	0/1:18,0:18:3.98:4,0,376	0/0:18,0:18:45.14:0,45,550	0/0:29,0:29:57.55:0,58,833	0/0:16,0:17:44.97:0,45,527	0/0:16,0:17:32.93:0,33,381	0/0:34,0:34:78.24:0,78,953	0/0:13,0:13:21.07:0,21,257
chr10	26561505	.	T	TG	1825.45	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-2.593;DP=483;FS=0.000;HRun=1;HaplotypeScore=99.3134;InbreedingCoeff=0.9680;MQ=84.72;MQ0=0;MQRankSum=-1.065;QD=38.03;ReadPosRankSum=-0.664;VQSLOD=3.4315;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:78.22:0,78,971	0/0:8,0:8:24.08:0,24,311	0/0:17,0:17:45.15:0,45,584	0/0:16,0:16:44.47:0,44,508	0/0:20,0:20:60.15:0,60,754	0/0:21,0:21:63.19:0,63,803	0/0:15,0:15:42.14:0,42,545	1/1:1,29:30:90.29:1319,90,0	0/0:9,0:9:27.09:0,27,350	0/0:12,0:12:36.12:0,36,467	0/0:15,0:15:36.10:0,36,448	0/0:19,0:19:57.19:0,57,740	0/0:22,0:22:63.12:0,63,782	0/0:12,0:12:36.12:0,36,467	0/0:18,0:18:45.12:0,45,556	0/0:22,0:22:66.18:0,66,836	1/1:0,18:18:42.14:628,42,0	0/0:10,0:10:27.09:0,27,351	0/0:30,0:30:81.22:0,81,1008	0/0:9,0:9:27.09:0,27,350	0/0:15,0:15:42.14:0,42,545	0/0:16,0:16:45.15:0,45,584	0/0:12,0:12:36.12:0,36,466	0/0:15,0:15:42.13:0,42,533	0/0:15,0:15:42.12:0,42,531	0/0:29,0:29:81.25:0,81,1027	0/0:26,0:26:78.24:0,78,991	0/0:4,0:4:9.03:0,9,117
chr10	26561631	.	T	TCTTC	14409.08	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-0.792;DP=454;FS=36.658;HRun=0;HaplotypeScore=88.0789;InbreedingCoeff=0.8818;MQ=62.24;MQ0=20;MQRankSum=1.011;QD=40.03;ReadPosRankSum=4.180;VQSLOD=3.2459;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,26:28:5.95:153,6,0	1/1:5,0:5:15.05:322,15,0	0/0:7,0:5:5.20:0,5,158	0/0:11,0:11:15:0,15,215	1/1:4,14:17:27.05:483,27,0	1/1:19,0:18:45.11:846,45,0	1/1:21,0:18:51.12:981,51,0	0/0:32,0:29:75.24:0,75,1237	1/1:18,1:18:38.91:662,39,0	1/1:9,0:7:18.06:387,18,0	1/1:8,0:8:24.08:505,24,0	1/1:11,0:11:33.06:659,33,0	1/1:16,0:15:39.07:754,39,0	1/1:12,1:12:27.09:580,27,0	0/0:24,0:24:60.15:0,60,1005	1/1:2,18:19:9.03:232,9,0	0/0:20,0:17:40.92:0,41,596	1/1:3,16:19:2.96:19,3,0	1/1:22,0:22:56.87:944,57,0	1/1:14,0:14:39.13:871,39,0	1/1:13,0:11:24.08:586,24,0	1/1:7,0:7:21.07:434,21,0	1/1:12,0:12:30.09:573,30,0	1/1:18,0:16:36.12:769,36,0	1/1:21,0:20:60.16:1286,60,0	1/1:13,0:12:33.10:763,33,0	1/1:26,0:23:63.21:1306,63,0	1/1:7,0:6:15.01:294,15,0
chr10	26561701	.	TTCC	T	71.37	PASS	AB=0.896;AC=10;AF=0.227;AN=44;BaseQRankSum=2.142;DP=249;FS=0.000;HRun=0;HaplotypeScore=44.9656;InbreedingCoeff=-0.0782;MQ=32.35;MQ0=67;MQRankSum=1.319;QD=0.86;ReadPosRankSum=-1.903;VQSLOD=0.8214;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:8,1:8:37.55:47,0,38	0/0:1,0:1:3.01:0,3,37	./.	./.	0/1:10,1:5:13.22:36,0,13	1/1:4,0:1:1.55:4,2,0	./.	./.	0/1:16,0:6:13.86:14,0,127	0/0:12,0:4:9.80:0,10,78	0/1:1,2:2:0:0,0,0	0/0:9,0:8:23.26:0,23,251	0/0:9,0:4:7.21:0,7,130	0/0:9,0:6:12.26:0,12,190	0/0:17,0:12:14.88:0,15,169	0/1:4,2:5:12.72:53,0,13	0/1:12,0:6:0.58:1,0,43	0/0:18,0:11:15.04:0,15,182	0/0:1,0:1:3.01:0,3,37	0/0:4,0:2:6.02:0,6,80	0/1:11,0:6:14.75:15,0,95	./.	./.	0/0:23,0:12:7.48:0,7,265	0/1:11,0:9:15.55:16,0,126	0/0:15,0:5:14.41:0,14,127	0/0:11,0:4:11.77:0,12,73	0/0:13,0:7:14.53:0,15,136
chr10	26561725	.	C	CTTCT	1212.67	PASS	AB=1.000;AC=19;AF=0.396;AN=48;BaseQRankSum=-3.267;DP=271;FS=19.137;HRun=0;HaplotypeScore=47.7317;InbreedingCoeff=0.4092;MQ=41.42;MQ0=50;MQRankSum=-0.401;QD=9.94;ReadPosRankSum=-2.521;VQSLOD=-0.2331;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,0:5:14.94:163,15,0	0/0:3,0:3:9:0,9,85	./.	./.	1/1:11,0:5:14.94:129,15,0	1/1:5,0:2:2.99:24,3,0	1/1:5,0:4:6.47:55,6,0	./.	0/0:13,0:5:8.81:0,9,66	0/0:15,0:7:11.89:0,12,113	0/0:2,0:1:3:0,3,25	0/0:10,0:9:27.03:0,27,262	0/1:12,0:8:32.86:33,0,108	0/0:10,0:8:11.89:0,12,109	0/0:12,6:15:3.01:0,3,46	1/1:5,0:5:14.95:148,15,0	./.	0/0:19,0:12:19.62:0,20,193	0/0:2,0:2:2.99:0,3,24	0/1:9,0:7:6.12:6,0,127	0/1:10,0:7:14.57:15,0,65	0/1:5,0:4:19.76:43,0,20	0/0:5,0:5:11.97:0,12,97	0/0:18,0:8:18.01:0,18,174	0/0:10,0:9:14.74:0,15,110	1/1:22,0:13:2.50:256,3,0	1/1:16,0:11:30.01:301,30,0	0/1:17,0:12:2.77:205,0,3
chr10	26563316	.	GATAT	G	2968.75	PASS	AB=1.000;AC=45;AF=0.833;AN=54;BaseQRankSum=-2.949;DP=238;FS=26.102;HRun=0;HaplotypeScore=41.2125;InbreedingCoeff=0.4749;MQ=90.80;MQ0=5;MQRankSum=1.316;QD=16.49;ReadPosRankSum=5.185;VQSLOD=1.5318;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,4:5:6.02:88,6,0	1/1:1,1:2:3.01:51,3,0	0/0:16,0:12:5.98:0,6,62	0/1:33,0:17:3.14:3,0,26	1/1:6,3:9:8.99:121,9,0	1/1:3,8:11:12.04:203,12,0	1/1:4,0:4:3.01:51,3,0	0/0:22,0:21:36.07:0,36,504	1/1:4,0:4:3.01:48,3,0	1/1:4,3:7:9.02:123,9,0	1/1:9,0:9:9.01:102,9,0	1/1:1,1:3:6.01:78,6,0	1/1:2,4:6:3.01:51,3,0	1/1:3,2:5:6.02:101,6,0	0/0:6,0:6:9.03:0,9,224	1/1:1,4:5:6.02:101,6,0	0/0:10,0:10:2.92:0,3,17	1/1:6,7:13:15.05:253,15,0	1/1:3,8:11:24.07:372,24,0	1/1:1,3:4:9:108,9,0	1/1:2,4:6:12.04:203,12,0	./.	1/1:2,0:2:3:27,3,0	1/1:2,0:2:3:25,3,0	1/1:3,3:7:12.03:180,12,0	1/1:3,3:6:9.03:144,9,0	1/1:0,4:4:9.03:152,9,0	1/1:8,14:22:33.09:528,33,0
chr10	26563338	.	TA	T	371.31	PASS	AB=0.576;AC=3;AF=0.054;AN=56;BaseQRankSum=-1.683;DP=194;FS=12.839;HRun=1;HaplotypeScore=33.7671;InbreedingCoeff=0.1759;MQ=81.98;MQ0=7;MQRankSum=-0.787;QD=15.47;ReadPosRankSum=-2.059;VQSLOD=1.3768;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:4:9.02:0,9,95	0/0:2,0:2:6.01:0,6,74	0/0:10,0:6:5.85:0,6,56	0/0:32,0:12:13.85:0,14,115	0/0:7,0:7:17.89:0,18,162	0/0:9,0:9:15.01:0,15,154	0/0:2,0:2:6.01:0,6,72	0/1:5,14:18:99:440,0,127	0/0:3,0:3:9.01:0,9,118	0/0:7,0:7:19.30:0,19,251	0/0:3,0:3:9:0,9,118	0/0:5,0:5:14.90:0,15,159	0/0:5,0:5:6:0,6,52	0/0:4,0:4:12.02:0,12,147	0/0:4,0:4:12.04:0,12,192	0/0:4,0:4:9.01:0,9,102	1/1:4,1:5:2.88:20,3,0	0/0:11,0:11:26.95:0,27,285	0/0:14,0:14:40.26:0,40,428	0/0:4,0:4:9.02:0,9,106	0/0:4,0:4:12:0,12,106	0/0:2,0:2:5.93:0,6,62	0/0:2,0:2:6.01:0,6,73	0/0:1,0:1:3.01:0,3,48	0/0:4,0:4:11.93:0,12,99	0/0:6,0:6:18.03:0,18,207	0/0:4,0:4:12.01:0,12,127	0/0:17,0:17:35.74:0,36,308
chr10	26563645	.	CGT	C	985.10	PASS	AB=0.925;AC=33;AF=0.750;AN=44;BaseQRankSum=-2.937;DP=405;FS=0.986;HRun=0;HaplotypeScore=70.9340;InbreedingCoeff=0.3169;MQ=68.01;MQ0=15;MQRankSum=2.804;QD=3.82;ReadPosRankSum=1.915;VQSLOD=2.0821;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:25,1:26:11.32:74,11,0	./.	./.	./.	1/1:11,0:12:8.93:65,9,0	0/1:13,2:15:11.97:64,0,12	1/1:14,2:16:17.75:105,18,0	0/0:18,0:18:2.90:0,3,16	1/1:5,1:6:5.95:42,6,0	1/1:10,0:10:5.80:46,6,0	./.	1/1:12,1:13:12.19:97,12,0	1/1:9,0:10:8.93:62,9,0	0/1:14,0:13:8.09:14,0,8	0/0:4,0:4:3.01:0,3,44	1/1:12,0:12:11.83:78,12,0	0/0:27,0:27:30.43:0,30,181	0/1:22,3:24:11.31:113,0,11	0/0:11,0:10:2.88:0,3,15	./.	1/1:30,0:30:12.32:87,12,0	1/1:7,0:7:5.94:41,6,0	1/1:8,1:9:2.99:24,3,0	1/1:15,0:16:2.85:21,3,0	1/1:9,1:10:8.95:68,9,0	1/1:11,0:11:6.33:60,6,0	1/1:15,0:15:7.13:60,7,0	./.
chr10	26565445	.	T	TGATA	31198.12	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-0.256;DP=632;FS=1.702;HRun=0;HaplotypeScore=105.3373;InbreedingCoeff=0.9918;MQ=73.81;MQ0=0;MQRankSum=-8.974;QD=62.65;ReadPosRankSum=4.948;VQSLOD=6.8965;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,32:40:90.31:2370,90,0	1/1:2,14:15:33.11:869,33,0	0/0:26,0:26:64.30:0,64,1275	0/0:18,0:18:45.15:0,45,757	1/1:3,25:32:60.21:1545,60,0	1/1:3,23:28:69.24:1819,69,0	1/1:3,15:19:42.14:1107,42,0	0/0:28,0:28:69.17:0,69,1232	1/1:1,23:26:69.24:1818,69,0	1/1:1,16:18:48.16:1210,48,0	1/1:4,17:21:51.18:1305,51,0	1/1:2,18:21:54.19:1423,54,0	1/1:2,18:22:51.18:1346,51,0	1/1:1,22:24:66.23:1741,66,0	0/0:29,0:29:81.28:0,81,1485	1/1:1,14:16:39.13:1028,39,0	0/0:33,0:32:87.28:0,87,1552	1/1:1,7:8:21.07:554,21,0	1/1:5,11:15:36.09:792,36,0	1/1:1,17:20:45.15:1187,45,0	1/1:2,26:28:72.25:1896,72,0	1/1:2,12:14:33.11:870,33,0	1/1:1,25:27:69.24:1819,69,0	1/1:0,26:27:66.23:1729,66,0	1/1:3,16:22:57.20:1485,57,0	1/1:4,19:25:63.16:1548,63,0	1/1:4,19:23:54.09:1424,54,0	1/1:0,4:4:12.04:317,12,0
chr10	26567365	.	A	AT	1034.94	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-7.369;DP=572;FS=6.515;HRun=8;HaplotypeScore=53.3906;InbreedingCoeff=0.9821;MQ=78.31;MQ0=0;MQRankSum=-1.270;QD=24.07;ReadPosRankSum=-1.827;VQSLOD=3.6674;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:30:0,30,275	0/0:11,0:11:33.02:0,33,302	0/0:14,0:15:28.78:0,29,272	0/0:13,0:13:30.15:0,30,249	0/0:31,0:31:78.01:0,78,705	0/0:24,0:24:69.04:0,69,632	0/0:12,0:12:26.99:0,27,242	1/1:6,18:25:57:638,57,0	0/0:17,0:17:45.02:0,45,412	0/0:22,0:22:63.03:0,63,576	0/0:32,0:32:87.01:0,87,787	0/0:21,0:21:57.02:0,57,522	0/0:22,0:22:63.03:0,63,577	0/0:13,0:13:39.01:0,39,353	0/0:20,0:20:60.03:0,60,549	0/0:22,0:22:57.03:0,57,522	1/1:2,16:18:45.13:519,45,0	0/0:5,0:5:12.01:0,12,110	0/0:27,0:27:68.06:0,68,610	0/0:36,0:36:99:0,102,925	0/0:17,0:17:45.02:0,45,412	0/0:22,0:22:63:0,63,565	0/0:28,0:28:78.03:0,78,714	0/0:12,0:12:36:0,36,324	0/0:14,0:14:42.02:0,42,384	0/0:34,0:34:90.04:0,90,820	0/0:36,0:35:93.01:0,93,846	0/0:9,0:9:27.01:0,27,247
chr10	26567649	.	G	GTTTT	10577.97	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=4.386;DP=553;FS=0.592;HRun=8;HaplotypeScore=177.3397;InbreedingCoeff=0.9736;MQ=76.15;MQ0=0;MQRankSum=-7.551;QD=21.37;ReadPosRankSum=0.356;VQSLOD=1.0886;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,0:9:26.54:240,27,0	1/1:2,0:11:18.04:190,18,0	0/0:19,0:19:47.93:0,48,597	0/0:19,0:19:20.19:0,20,355	1/1:17,0:29:68.28:634,68,0	1/1:2,0:26:56.81:571,57,0	1/1:9,0:25:56.93:546,57,0	1/1:9,13:33:68.99:1027,69,0	1/1:3,0:18:27.03:285,27,0	1/1:5,0:19:48:497,48,0	1/1:4,0:22:53.89:522,54,0	1/1:2,0:12:24.05:253,24,0	1/1:3,0:21:41.97:394,42,0	1/1:3,0:26:50.90:505,51,0	0/0:20,0:20:54.16:0,54,817	1/1:7,0:19:32.93:324,33,0	1/1:6,12:20:12:239,12,0	1/1:7,0:19:42.41:364,42,0	1/1:4,0:15:38.90:369,39,0	1/1:6,0:28:71.77:691,72,0	1/1:4,0:16:26.95:305,27,0	1/1:0,0:13:36:366,36,0	1/1:6,0:27:60.45:534,60,0	1/1:0,0:9:18.05:203,18,0	1/1:2,0:20:44.98:501,45,0	1/1:7,0:27:65.92:627,66,0	1/1:4,0:23:25.84:251,26,0	1/1:3,0:8:15:141,15,0
chr10	26569309	.	C	CTA	29464.61	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=2.444;DP=577;FS=8.684;HRun=0;HaplotypeScore=103.1981;InbreedingCoeff=0.9573;MQ=71.75;MQ0=0;MQRankSum=-5.706;QD=55.18;ReadPosRankSum=4.119;VQSLOD=4.5862;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,19:20:48.16:974,48,0	1/1:0,14:14:42.14:852,42,0	0/0:6,0:6:15.01:0,15,213	0/0:15,0:15:38.84:0,39,533	1/1:1,32:34:93.31:1863,93,0	1/1:0,27:28:75.25:1476,75,0	1/1:0,10:11:27.09:547,27,0	1/1:0,25:26:78.25:1531,78,0	1/1:2,27:29:78.25:1583,78,0	1/1:0,27:27:81.28:1645,81,0	1/1:0,21:21:63.22:1277,63,0	1/1:0,20:21:54.19:1096,54,0	1/1:1,28:30:81.23:1596,81,0	1/1:1,22:23:63.21:1279,63,0	0/0:22,0:22:63.20:0,63,999	1/1:0,24:24:66.23:1340,66,0	1/1:0,10:10:30.10:608,30,0	1/1:0,2:2:6.02:122,6,0	1/1:1,14:16:45.10:873,45,0	1/1:1,24:25:72.16:1357,72,0	1/1:0,27:29:72.25:1462,72,0	1/1:1,13:16:39.13:792,39,0	1/1:0,13:14:36.12:730,36,0	1/1:0,18:18:51.18:1035,51,0	1/1:0,27:27:72.25:1461,72,0	1/1:0,21:22:66.20:1286,66,0	1/1:0,33:34:93.32:1888,93,0	1/1:0,13:13:39.13:792,39,0
chr10	26569893	.	G	GT	10881.86	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-2.568;DP=570;FS=0.462;HRun=9;HaplotypeScore=86.4394;InbreedingCoeff=0.9927;MQ=77.42;MQ0=0;MQRankSum=-3.503;QD=23.35;ReadPosRankSum=4.323;VQSLOD=5.2680;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,11:12:33.09:365,33,0	1/1:0,6:6:18.05:199,18,0	0/0:22,0:23:46.65:0,47,375	0/0:20,0:18:18.60:0,19,223	1/1:6,16:23:41.89:423,42,0	1/1:4,27:32:72.03:778,72,0	1/1:1,15:16:39.11:431,39,0	0/0:5,0:25:31.01:0,31,90	1/1:3,19:22:54.15:597,54,0	1/1:5,18:23:42.06:428,42,0	1/1:2,20:22:28.08:524,28,0	1/1:1,17:18:36.10:398,36,0	1/1:6,21:27:42.11:465,42,0	1/1:1,15:16:36.10:398,36,0	0/0:24,0:24:71.99:0,72,625	1/1:1,24:25:63.17:697,63,0	0/0:2,0:12:18.33:0,18,54	1/1:2,8:10:21.06:232,21,0	1/1:5,19:24:58.06:605,58,0	1/1:1,21:23:53.87:536,54,0	1/1:4,9:13:24.06:266,24,0	1/1:1,17:18:48.05:504,48,0	1/1:0,15:16:39.11:431,39,0	1/1:5,16:21:39.11:431,39,0	1/1:2,21:24:60:645,60,0	1/1:6,16:24:56.46:552,56,0	1/1:6,30:37:60:645,60,0	1/1:1,12:13:30.08:332,30,0
chr10	26572493	.	GGAGA	G	810.78	PASS	AB=0.969;AC=26;AF=0.619;AN=42;BaseQRankSum=2.509;DP=537;FS=46.325;HRun=0;HaplotypeScore=96.7140;InbreedingCoeff=0.4207;MQ=59.56;MQ0=23;MQRankSum=0.443;QD=3.12;ReadPosRankSum=-0.358;VQSLOD=-0.4562;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:27,1:28:5.98:67,6,0	./.	./.	./.	./.	1/1:21,0:21:7.48:167,7,0	1/1:17,0:17:3:26,3,0	0/0:26,0:26:3.01:0,3,38	1/1:13,0:13:3:26,3,0	./.	./.	1/1:15,3:18:6.02:92,6,0	1/1:14,3:18:12:140,12,0	1/1:19,2:21:14.95:165,15,0	0/0:13,0:13:3.01:0,3,63	0/1:22,0:21:0:0,0,0	0/0:7,0:7:6.02:0,6,100	1/1:11,1:12:2.05:45,2,0	0/0:14,0:14:0.47:0,0,1	./.	0/0:13,0:15:5.71:0,6,33	0/0:10,0:10:9:0,9,92	0/1:14,0:15:15.56:16,0,34	1/1:20,0:24:2.70:28,3,0	1/1:13,0:16:4.99:18,5,0	1/1:11,0:11:3:28,3,0	1/1:21,0:21:2.90:128,3,0	0/0:17,0:14:12.80:0,13,91
chr10	26574962	.	T	TG	22715.52	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-4.704;DP=706;FS=4.501;HRun=2;HaplotypeScore=77.5055;InbreedingCoeff=0.9989;MQ=58.44;MQ0=2;MQRankSum=2.381;QD=36.11;ReadPosRankSum=5.740;VQSLOD=5.1957;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,45:45:99:1676,120,0	1/1:2,8:10:24.08:345,24,0	0/0:21,0:16:48.12:0,48,574	0/0:27,0:19:57.07:0,57,638	1/1:1,26:27:72.24:1035,72,0	1/1:0,24:24:63.21:906,63,0	1/1:0,24:23:54.18:770,54,0	1/1:7,30:30:69.19:951,69,0	1/1:1,24:25:63.21:907,63,0	1/1:1,25:26:75.15:1016,75,0	1/1:0,13:13:30.10:430,30,0	1/1:0,33:33:96.32:1381,96,0	1/1:1,29:30:78.26:1122,78,0	1/1:0,26:26:66.22:948,66,0	0/0:29,0:29:87.27:0,87,1077	1/1:4,22:26:60.20:863,60,0	1/1:1,26:27:75.25:1079,75,0	1/1:0,29:29:69.23:992,69,0	1/1:5,22:25:62.92:820,63,0	1/1:1,21:22:60.20:862,60,0	1/1:0,18:18:39.13:561,39,0	1/1:0,22:22:60.13:838,60,0	1/1:0,18:18:45.15:647,45,0	1/1:0,29:29:75.25:1079,75,0	1/1:1,21:22:45.15:641,45,0	1/1:0,38:38:99:1596,111,0	1/1:0,21:21:57.19:819,57,0	1/1:0,10:10:30.10:432,30,0
chr10	26577303	.	ATT	A	14817.90	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=1.689;DP=566;FS=9.275;HRun=10;HaplotypeScore=90.9859;InbreedingCoeff=0.9943;MQ=70.61;MQ0=0;MQRankSum=-4.365;QD=28.44;ReadPosRankSum=2.737;VQSLOD=4.4643;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,13:13:36.10:401,36,0	1/1:1,13:14:36.10:401,36,0	0/0:8,0:10:17.03:0,17,207	0/0:13,0:13:27.81:0,28,333	1/1:2,23:25:63.15:702,63,0	1/1:1,30:31:72.18:803,72,0	1/1:3,15:18:42.10:468,42,0	1/1:6,26:32:78.16:849,78,0	1/1:0,18:18:45.12:502,45,0	1/1:1,22:23:66.17:735,66,0	1/1:0,23:24:71.93:777,72,0	1/1:1,9:10:24.06:268,24,0	1/1:2,13:16:38.83:413,39,0	1/1:1,24:25:69.18:769,69,0	0/0:21,0:22:62.69:0,63,939	1/1:3,20:23:57.15:635,57,0	1/1:0,16:16:45.12:502,45,0	1/1:2,9:11:27.07:301,27,0	1/1:5,21:26:60.13:658,60,0	1/1:2,28:30:78.18:868,78,0	1/1:0,20:20:54.15:602,54,0	1/1:2,18:20:51.13:569,51,0	1/1:0,11:11:30.08:334,30,0	1/1:1,13:15:35.83:380,36,0	1/1:2,22:24:57.14:635,57,0	1/1:2,30:32:90.24:1003,90,0	1/1:2,31:33:84.21:936,84,0	1/1:2,9:11:28.63:305,29,0
chr10	26578195	.	C	CT	11656.63	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-10.601;DP=552;FS=2.550;HRun=8;HaplotypeScore=51.4841;InbreedingCoeff=0.9515;MQ=66.33;MQ0=0;MQRankSum=-0.586;QD=26.14;ReadPosRankSum=4.188;VQSLOD=5.4573;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,16:17:33.10:381,33,0	1/1:1,8:9:18.05:208,18,0	0/0:14,0:12:22.56:0,23,195	0/0:8,0:8:11.53:0,12,80	1/1:4,29:33:90.22:1022,90,0	1/1:3,13:16:39.08:436,39,0	1/1:3,11:14:18.05:208,18,0	0/0:33,0:33:81.03:0,81,737	1/1:1,15:16:11.70:388,12,0	1/1:3,21:24:60.17:682,60,0	1/1:1,18:19:54.16:621,54,0	1/1:5,25:30:44.79:769,45,0	1/1:1,23:25:60.16:680,60,0	1/1:2,13:15:42.12:484,42,0	0/0:16,0:16:45.01:0,45,407	1/1:3,18:21:48.14:554,48,0	0/0:35,0:35:99:0,102,933	1/1:1,18:19:45.13:519,45,0	1/1:5,11:14:27.07:304,27,0	1/1:3,12:15:5.63:319,6,0	1/1:5,7:13:20.89:222,21,0	1/1:2,8:10:21.02:228,21,0	1/1:3,21:24:48.13:554,48,0	1/1:0,7:7:21.06:242,21,0	1/1:3,28:31:72.21:831,72,0	1/1:2,25:27:75.22:865,75,0	1/1:3,26:29:66.20:759,66,0	1/1:1,15:16:33.10:381,33,0
chr10	26579869	.	AG	A	697.04	PASS	AC=4;AF=0.40;AN=10;BaseQRankSum=-1.114;DP=82;FS=5.738;HRun=8;HaplotypeScore=68.1661;MQ=105.56;MQ0=2;MQRankSum=-3.586;QD=21.12;ReadPosRankSum=1.463;VQSLOD=4.0485;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:21,1:13:26.58:0,27,244	0/0:18,0:16:31.50:0,31,364	./.	./.	./.	1/1:1,19:20:53.89:497,54,0	./.	./.	./.	./.	./.	./.	0/0:9,0:9:27.07:0,27,314	./.	1/1:2,11:13:30.04:290,30,0	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.
chr10	26580576	.	CATATATATATATATATATATATATATATATATAT	C	1984.38	PASS	AB=0.885;AC=16;AF=0.800;AN=20;BaseQRankSum=2.766;DP=135;FS=2.199;HRun=0;HaplotypeScore=106.5290;InbreedingCoeff=0.0402;MQ=72.59;MQ0=3;MQRankSum=0.867;QD=31.50;ReadPosRankSum=2.518;VQSLOD=1.7745;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:7,0:7:3.01:33,3,0	1/1:0,0:1:3.01:238,3,0	./.	0/0:7,0:4:1.25:0,1,3	./.	1/1:4,2:6:6.02:519,6,0	./.	0/1:18,0:17:0.61:1,0,206	./.	./.	./.	./.	./.	1/1:2,2:4:3.01:259,3,0	./.	1/1:0,1:1:3.01:259,3,0	0/1:7,0:10:31.86:191,0,32	1/1:5,5:10:6.02:519,6,0	./.	./.	1/1:6,0:6:3.01:49,3,0	./.	./.	./.	./.	./.	./.	./.
chr10	26581585	.	ATTTTTTT	A	21689.30	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=10.497;DP=499;FS=8.747;HRun=9;HaplotypeScore=129.7582;InbreedingCoeff=0.9577;MQ=62.55;MQ0=2;MQRankSum=-14.320;QD=55.19;ReadPosRankSum=5.954;VQSLOD=1.8266;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,20:20:42.07:979,42,0	1/1:0,5:5:12.04:295,12,0	0/0:15,0:15:41.96:0,42,1261	0/0:13,0:13:33.03:0,33,932	1/1:2,11:13:24.01:534,24,0	1/1:3,29:32:72.24:1774,72,0	1/1:0,20:20:42.14:1035,42,0	0/0:29,0:30:81.25:0,81,2843	1/1:1,13:14:27.09:666,27,0	1/1:1,18:19:48.11:1097,48,0	1/1:1,11:12:30.02:680,30,0	1/1:0,20:20:45.15:1110,45,0	1/1:1,23:24:60.20:1438,60,0	1/1:0,25:25:66.23:1626,66,0	0/0:34,0:34:99:0,102,3744	1/1:2,23:25:57.14:1351,57,0	0/0:13,0:14:42.11:0,42,1351	1/1:1,7:8:15.05:370,15,0	1/1:0,17:17:51.09:1057,51,0	1/1:0,19:19:45.15:1109,45,0	1/1:1,9:10:12.04:296,12,0	1/1:0,16:16:33.11:812,33,0	1/1:0,5:5:9.03:222,9,0	1/1:1,9:10:15.05:369,15,0	1/1:0,14:14:33.11:814,33,0	1/1:0,26:26:71.54:1687,72,0	1/1:0,32:32:84.29:2072,84,0	1/1:0,5:5:12.04:296,12,0
chr10	26581928	.	G	GGAAACCAGCA	64453.15	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-7.500;DP=642;FS=11.223;HRun=0;HaplotypeScore=154.0358;InbreedingCoeff=0.9113;MQ=74.51;MQ0=0;MQRankSum=-14.137;QD=116.13;ReadPosRankSum=3.465;VQSLOD=5.3518;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,21:34:63.13:3022,63,0	1/1:3,2:7:15.05:572,15,0	0/0:31,0:31:93.27:0,93,2570	0/0:17,0:17:44.64:0,45,1373	1/1:4,10:17:33.11:1711,33,0	1/1:9,18:29:63.22:3008,63,0	1/1:7,12:23:57.20:2866,57,0	1/1:28,7:39:99:5005,114,0	1/1:13,20:34:93.32:4478,93,0	1/1:10,19:33:99:4502,99,0	1/1:5,4:11:24.04:1072,24,0	1/1:11,13:28:69.24:3520,69,0	1/1:14,15:31:84.25:4085,84,0	1/1:12,7:20:51.18:2388,51,0	0/0:39,0:39:99:0,117,3596	1/1:2,21:25:69.23:3595,69,0	1/1:11,8:24:54.14:2507,54,0	1/1:2,3:7:9.03:479,9,0	1/1:11,5:20:57.18:1922,57,0	1/1:6,12:21:48.16:2383,48,0	1/1:1,5:8:15.05:798,15,0	1/1:9,12:22:57.15:2718,57,0	1/1:4,13:17:48.12:2268,48,0	1/1:5,10:19:33.03:1369,33,0	1/1:4,12:17:42.10:2044,42,0	1/1:9,21:32:90.30:4311,90,0	1/1:13,15:33:81.17:3720,81,0	1/1:4,0:4:3.01:109,3,0
chr10	26582561	.	A	ATGAGGAAACTC	64278.76	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-4.554;DP=622;FS=8.699;HRun=0;HaplotypeScore=176.1376;InbreedingCoeff=0.8952;MQ=72.49;MQ0=0;MQRankSum=-12.265;QD=117.30;ReadPosRankSum=4.180;VQSLOD=4.7535;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,5:10:18.06:1021,18,0	1/1:2,4:7:18.06:854,18,0	0/0:27,0:28:32.85:0,33,1758	0/0:23,0:23:55.01:0,55,1560	1/1:22,19:42:90.30:3944,90,0	1/1:7,20:31:72.25:3921,72,0	1/1:8,7:15:45.15:2089,45,0	1/1:19,8:32:78.24:3304,78,0	1/1:7,10:19:45.15:2198,45,0	1/1:14,8:25:63.18:2698,63,0	1/1:17,18:38:96.33:4379,96,0	1/1:11,6:20:45.15:2011,45,0	1/1:7,15:24:60.16:3047,60,0	1/1:8,16:27:72.25:3594,72,0	0/0:23,0:23:66.23:0,66,2130	1/1:6,15:24:63.22:3286,63,0	1/1:5,3:8:21.07:1002,21,0	1/1:6,3:11:16.26:798,16,0	1/1:11,8:21:60.17:2376,60,0	1/1:9,24:38:96.27:4775,96,0	1/1:4,0:4:3.01:41,3,0	1/1:5,16:24:63.13:3085,63,0	1/1:14,18:34:87.30:4294,87,0	1/1:3,6:11:18.06:885,18,0	1/1:8,13:25:57.19:2738,57,0	1/1:7,12:23:69.18:3251,69,0	1/1:12,18:31:81.28:4349,81,0	1/1:0,2:2:6.02:341,6,0
chr10	26584183	.	C	CACACAG	20836.71	PASS	AB=0.687;AC=46;AF=0.821;AN=56;BaseQRankSum=-2.605;DP=703;FS=2.365;HRun=0;HaplotypeScore=134.6316;InbreedingCoeff=0.4644;MQ=50.48;MQ0=13;MQRankSum=-5.811;QD=33.45;ReadPosRankSum=6.123;VQSLOD=4.3079;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,20:30:23.87:563,24,0	1/1:1,14:16:30.10:913,30,0	0/0:23,0:11:20.98:0,21,199	0/0:25,0:10:26.94:0,27,240	1/1:4,25:31:43.39:1193,43,0	1/1:4,17:24:30.54:1329,31,0	1/1:3,7:10:12.04:329,12,0	0/1:34,0:32:61.11:541,0,61	1/1:3,15:21:39.13:1184,39,0	1/1:3,19:26:39.92:1175,40,0	1/1:2,19:22:12.04:383,12,0	1/1:2,20:24:36.07:1097,36,0	1/1:1,28:31:47.96:1551,48,0	1/1:2,12:16:24.08:635,24,0	0/0:31,0:31:82.31:0,82,1241	1/1:2,22:30:42.14:1235,42,0	1/1:4,0:16:6.02:133,6,0	0/1:5,18:29:18.12:345,0,18	1/1:3,1:31:7.66:903,8,0	1/1:6,0:39:39.02:734,39,0	0/1:8,0:17:14.97:67,0,15	1/1:2,21:30:47.87:1304,48,0	0/1:4,21:28:3.07:754,0,3	1/1:2,10:15:0.78:224,1,0	1/1:1,20:24:35.48:1067,35,0	1/1:4,17:22:42.60:839,43,0	1/1:6,33:43:36.20:2036,36,0	1/1:2,2:5:15.02:303,15,0
chr10	26584185	.	C	CACAG	10065.62	PASS	AB=0.997;AC=39;AF=0.696;AN=56;BaseQRankSum=10.417;DP=689;FS=13.079;HRun=0;HaplotypeScore=155.0637;InbreedingCoeff=0.0402;MQ=50.93;MQ0=13;MQRankSum=-9.756;QD=16.61;ReadPosRankSum=10.273;VQSLOD=1.9832;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:29:21.02:254,21,0	1/1:17,0:17:8.16:463,8,0	0/0:25,0:13:23.98:0,24,213	0/0:27,0:11:29.93:0,30,275	1/1:32,0:32:43.32:605,43,0	1/1:24,1:25:45.13:761,45,0	0/1:10,0:10:30.86:146,0,31	0/1:34,0:32:27.21:27,0,287	1/1:23,0:23:17.18:598,17,0	0/1:26,0:26:61.49:582,0,61	1/1:19,0:19:12.04:197,12,0	1/1:22,0:23:36.03:583,36,0	1/1:31,0:31:25.70:751,26,0	1/1:14,1:15:24.08:388,24,0	0/0:31,0:31:84.07:0,84,1107	1/1:29,0:29:42.13:656,42,0	0/1:15,0:15:12.41:31,0,12	0/1:30,0:29:36.95:178,0,37	0/1:28,0:28:85.77:332,0,86	0/1:34,0:34:21.93:227,0,22	0/1:17,0:17:15.20:20,0,15	1/1:28,0:28:26.08:631,26,0	0/1:28,1:28:20.53:463,0,21	1/1:14,0:14:0.78:110,1,0	1/1:24,0:24:22.91:543,23,0	0/1:23,0:21:74.05:317,0,74	1/1:42,1:42:30.80:1073,31,0	0/1:5,0:5:28.22:128,0,28
chr10	26585980	.	G	GC	1702.54	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-9.446;DP=678;FS=4.829;HRun=1;HaplotypeScore=60.5259;InbreedingCoeff=0.9997;MQ=56.64;MQ0=8;MQRankSum=-0.714;QD=38.69;ReadPosRankSum=-2.220;VQSLOD=3.2656;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:93.19:0,93,1125	0/0:13,0:13:39.13:0,39,506	0/0:25,0:11:33.11:0,33,422	0/0:23,0:13:36.11:0,36,457	0/0:30,0:30:84.23:0,84,1077	0/0:27,0:27:81.22:0,81,1007	0/0:18,0:18:54.18:0,54,700	1/1:1,25:26:75.22:1060,75,0	0/0:18,0:18:45.15:0,45,583	0/0:34,0:34:99:0,102,1303	0/0:18,0:18:51.16:0,51,650	0/0:15,0:15:45.13:0,45,570	0/0:28,0:28:81.26:0,81,1051	0/0:26,0:26:78.24:0,78,998	0/0:15,0:15:45.12:0,45,556	0/0:26,0:26:78.24:0,78,998	1/1:0,18:18:51.17:764,51,0	0/0:28,0:28:78.14:0,78,957	0/0:21,0:16:48.11:0,48,604	0/0:36,0:36:99:0,105,1350	0/0:21,0:21:63.19:0,63,803	0/0:29,0:29:87.28:0,87,1129	0/0:27,0:27:75.24:0,75,973	0/0:15,0:15:42.09:0,42,512	0/0:17,0:17:51.16:0,51,651	0/0:31,0:31:81.26:0,81,1052	0/0:44,0:44:99:0,126,1564	0/0:15,0:15:45.15:0,45,584
chr10	26587359	.	GA	G	4991.92	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=3.891;DP=299;FS=1.250;HRun=9;HaplotypeScore=36.4208;InbreedingCoeff=0.8827;MQ=70.07;MQ0=0;MQRankSum=-2.113;QD=21.24;ReadPosRankSum=4.794;VQSLOD=4.7102;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,14:18:45.02:412,45,0	1/1:1,4:5:12:110,12,0	0/0:10,0:8:23.77:0,24,212	0/0:7,0:7:18.02:0,18,179	1/1:0,11:11:30.02:274,30,0	1/1:2,10:12:30.01:275,30,0	1/1:0,3:3:6:55,6,0	0/0:19,0:19:45.12:0,45,511	1/1:3,10:13:21.01:192,21,0	1/1:1,15:16:45.02:409,45,0	1/1:1,12:13:36.02:329,36,0	1/1:0,10:10:30.02:275,30,0	1/1:4,6:10:15:137,15,0	1/1:0,9:9:18.01:165,18,0	0/0:11,1:12:5.64:0,6,319	1/1:0,11:11:27.01:247,27,0	0/0:16,0:16:42.12:0,42,483	1/1:3,14:17:33.01:302,33,0	1/1:2,13:15:39.02:357,39,0	1/1:0,7:7:21.01:192,21,0	1/1:0,3:3:6:55,6,0	1/1:1,3:4:9:82,9,0	1/1:0,6:6:12.01:110,12,0	1/1:1,10:11:24.01:220,24,0	1/1:0,7:7:15.01:137,15,0	1/1:2,8:10:24.01:219,24,0	1/1:0,18:18:33.02:302,33,0	1/1:0,6:5:15.01:137,15,0
chr10	26588463	.	T	TA	18757.65	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-8.514;DP=595;FS=5.472;HRun=3;HaplotypeScore=58.3076;InbreedingCoeff=0.9975;MQ=83.42;MQ0=0;MQRankSum=-5.839;QD=37.52;ReadPosRankSum=6.585;VQSLOD=4.5374;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,24:26:66.22:950,66,0	1/1:0,10:10:27.09:389,27,0	0/0:23,0:23:54.85:0,55,649	0/0:14,0:14:36.10:0,36,418	1/1:1,24:25:69.12:937,69,0	1/1:0,28:28:81.27:1166,81,0	1/1:1,12:13:33.11:475,33,0	0/0:33,0:33:90.24:0,90,1062	1/1:0,22:22:63.21:907,63,0	1/1:3,27:30:81.23:1109,81,0	1/1:0,27:27:75.25:1079,75,0	1/1:1,20:21:42.14:605,42,0	1/1:1,17:18:42.14:605,42,0	1/1:0,19:19:48.16:691,48,0	0/0:18,0:18:48.14:0,48,584	1/1:0,17:17:45.15:648,45,0	0/0:7,0:7:18.06:0,18,223	1/1:1,13:14:36.12:518,36,0	1/1:1,19:20:57.17:785,57,0	1/1:0,34:35:96.28:1345,96,0	1/1:2,14:16:36.12:518,36,0	1/1:0,26:26:69.23:993,69,0	1/1:3,28:31:78.26:1123,78,0	1/1:1,11:12:30.10:422,30,0	1/1:0,23:23:60.20:864,60,0	1/1:1,25:26:75.12:1032,75,0	1/1:2,28:30:78.26:1119,78,0	1/1:0,11:11:33.11:475,33,0
chr10	26588815	.	AG	A	21006.95	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=6.686;DP=782;FS=3.388;HRun=3;HaplotypeScore=77.5449;InbreedingCoeff=0.9980;MQ=93.08;MQ0=0;MQRankSum=-8.216;QD=33.34;ReadPosRankSum=7.393;VQSLOD=4.5153;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,50:51:99:1784,144,0	1/1:0,10:10:30.09:372,30,0	0/0:37,0:37:99:0,111,1565	0/0:28,0:28:78.13:0,78,1050	1/1:0,36:36:99:1304,108,0	1/1:1,22:23:60.19:743,60,0	1/1:0,22:22:60.19:743,60,0	0/0:34,0:33:93.26:0,93,1227	1/1:2,20:22:49.39:696,49,0	1/1:4,33:37:99:1215,99,0	1/1:2,26:28:75.15:909,75,0	1/1:1,25:26:66.21:818,66,0	1/1:2,29:31:81.22:1003,81,0	1/1:1,27:28:72.23:892,72,0	0/0:32,0:32:90.29:0,90,1277	1/1:0,35:35:96.30:1190,96,0	0/0:21,0:21:63.21:0,63,906	1/1:0,14:14:36.11:445,36,0	1/1:0,22:22:66.17:781,66,0	1/1:0,31:31:87.27:1077,87,0	1/1:0,41:41:99:1338,108,0	1/1:0,18:18:51.16:632,51,0	1/1:0,24:24:60.19:743,60,0	1/1:1,22:23:63.20:781,63,0	1/1:0,25:25:69.22:855,69,0	1/1:2,31:33:93.26:1126,93,0	1/1:1,38:39:99:1337,108,0	1/1:0,11:11:18.06:223,18,0
chr10	26591292	.	GT	G	4952.23	PASS	AB=0.637;AC=42;AF=0.750;AN=56;BaseQRankSum=2.690;DP=549;FS=1.968;HRun=14;HaplotypeScore=66.9639;InbreedingCoeff=-0.0099;MQ=72.37;MQ0=2;MQRankSum=-1.311;QD=9.63;ReadPosRankSum=0.326;VQSLOD=4.2636;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:7,19:30:15.95:304,0,16	0/1:5,5:12:7.28:92,0,7	0/0:20,0:15:5.99:0,6,50	0/1:11,0:11:11.99:12,0,59	1/1:9,24:34:54.45:419,54,0	1/1:7,24:32:11.76:361,12,0	1/1:1,8:13:25.99:147,26,0	1/1:12,16:30:51.82:337,52,0	0/1:3,9:12:1.07:138,0,1	1/1:10,11:22:12.05:206,12,0	1/1:4,20:29:4.79:273,5,0	1/1:3,2:5:5.90:41,6,0	1/1:9,14:24:17.55:229,18,0	0/1:3,11:15:14.96:191,0,15	0/0:13,0:15:23.85:0,24,206	1/1:6,9:15:20.79:144,21,0	0/1:7,19:27:46.42:273,0,46	0/1:6,13:20:18.42:160,0,18	1/1:7,10:19:5.85:164,6,0	1/1:4,11:17:30.31:185,30,0	1/1:4,7:14:17.99:100,18,0	1/1:6,17:24:6.74:183,7,0	0/1:12,8:22:38.12:139,0,38	1/1:4,11:16:31.75:211,32,0	1/1:3,14:18:8.95:189,9,0	0/1:10,12:22:69.22:141,0,69	0/1:5,21:27:22.11:292,0,22	1/1:0,3:3:2.98:21,3,0
chr10	26592925	.	CTATTATTATTATTATTAT	C	6625.68	PASS	AB=0.723;AC=38;AF=0.905;AN=42;BaseQRankSum=1.474;DP=168;FS=0.000;HRun=0;HaplotypeScore=77.8046;InbreedingCoeff=0.1153;MQ=67.47;MQ0=0;MQRankSum=-1.284;QD=43.02;ReadPosRankSum=1.582;VQSLOD=3.6515;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:3,7:10:4.96:431,0,5	1/1:0,1:1:3.01:148,3,0	./.	./.	1/1:4,4:8:12.02:334,12,0	1/1:7,1:8:14.96:253,15,0	1/1:3,0:3:9:99,9,0	1/1:16,0:16:14.86:124,15,0	1/1:0,2:2:3.01:148,3,0	1/1:5,4:9:11.95:446,12,0	1/1:0,4:4:9.03:416,9,0	./.	1/1:1,0:1:2.99:24,3,0	./.	0/0:1,0:1:3.01:0,3,256	./.	1/1:5,11:16:3.01:148,3,0	1/1:8,1:9:8.95:189,9,0	0/1:5,1:6:2.26:201,0,2	1/1:1,3:4:8.88:182,9,0	./.	1/1:1,0:1:2.94:18,3,0	./.	1/1:0,1:1:3.01:148,3,0	1/1:3,21:23:30.10:1452,30,0	1/1:1,6:7:18.05:718,18,0	1/1:3,13:16:21.07:1011,21,0	1/1:8,0:8:17.93:138,18,0
chr10	26593010	.	GATTTATTT	G	2353.74	PASS	AC=34;AF=0.850;AN=40;BaseQRankSum=6.242;DP=183;FS=11.274;HRun=0;HaplotypeScore=67.6539;InbreedingCoeff=0.4631;MQ=48.56;MQ0=2;MQRankSum=-1.718;QD=20.12;ReadPosRankSum=2.860;VQSLOD=1.0852;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,2:3:3.01:75,3,0	1/1:2,4:6:3.01:75,3,0	./.	./.	1/1:6,8:14:21.03:450,21,0	1/1:3,11:13:18.06:450,18,0	1/1:2,0:2:3.01:68,3,0	0/0:31,0:31:39.94:0,40,856	./.	1/1:5,0:5:3.01:70,3,0	1/1:5,2:7:12.03:216,12,0	1/1:1,2:3:5.94:41,6,0	1/1:1,3:4:6.02:149,6,0	1/1:1,3:4:2.97:20,3,0	0/0:3,0:3:6.02:0,6,237	1/1:3,0:3:3.01:61,3,0	0/0:20,0:20:51.18:0,51,2064	1/1:6,4:10:6.02:133,6,0	1/1:7,3:10:9.03:225,9,0	./.	./.	1/1:0,3:3:2.97:20,3,0	./.	./.	1/1:8,1:9:5.98:87,6,0	1/1:6,1:7:3.01:75,3,0	1/1:7,6:13:14.97:265,15,0	./.
chr10	26596090	.	G	GT	5826.83	PASS	AB=1.000;AC=48;AF=0.857;AN=56;BaseQRankSum=-1.392;DP=290;FS=3.495;HRun=8;HaplotypeScore=46.2973;InbreedingCoeff=0.5657;MQ=51.39;MQ0=3;MQRankSum=1.757;QD=22.07;ReadPosRankSum=2.478;VQSLOD=5.0783;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,11:16:35.93:387,36,0	1/1:0,3:3:9.02:100,9,0	0/1:18,0:5:0.17:19,0,0	0/0:10,0:5:11.35:0,11,82	1/1:0,18:18:39.11:437,39,0	1/1:1,6:7:15.51:171,16,0	1/1:2,5:7:18:189,18,0	0/1:17,0:17:11.06:11,0,17	1/1:1,6:6:15.04:169,15,0	1/1:4,13:17:45:495,45,0	1/1:0,12:12:32.83:348,33,0	1/1:1,3:4:6.02:67,6,0	1/1:3,7:10:18.05:206,18,0	1/1:3,4:7:18.52:201,19,0	0/0:9,0:9:27.01:0,27,247	1/1:0,5:5:9.03:102,9,0	0/0:6,0:6:1.81:0,2,5	1/1:1,6:7:18.05:207,18,0	1/1:5,13:18:33.04:367,33,0	1/1:7,9:16:36.09:394,36,0	1/1:1,1:2:6.02:68,6,0	1/1:1,3:4:6.02:67,6,0	1/1:0,12:11:27.08:305,27,0	1/1:0,3:3:6.01:69,6,0	1/1:0,15:15:36.10:409,36,0	1/1:0,13:13:39.11:450,39,0	1/1:6,9:15:36.06:383,36,0	1/1:0,9:9:18.05:205,18,0
chr10	26596093	.	TTTTTTG	T	497.61	PASS	AB=1.000;AC=6;AF=0.107;AN=56;BaseQRankSum=-5.787;DP=287;FS=1.067;HRun=0;HaplotypeScore=86.2919;InbreedingCoeff=0.4767;MQ=51.15;MQ0=4;MQRankSum=-2.466;QD=8.29;ReadPosRankSum=-5.486;VQSLOD=0.2767;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:35.16:0,35,654	0/0:3,0:3:7.84:0,8,112	0/1:20,0:5:0.41:0,0,49	0/0:12,0:5:10.54:0,11,202	0/0:18,0:18:37.66:0,38,664	0/0:7,0:7:16.61:0,17,274	0/0:7,0:7:16.29:0,16,273	1/1:5,10:14:33.08:538,33,0	0/0:7,0:6:15.05:0,15,272	0/0:18,0:18:32.81:0,33,663	0/0:12,0:12:18.96:0,19,528	0/0:3,0:3:6.02:0,6,110	0/0:9,0:9:18.05:0,18,323	0/0:8,0:8:17.23:0,17,193	0/0:9,0:9:27.08:0,27,807	0/0:5,0:5:9.03:0,9,162	1/1:3,4:6:3.01:65,3,0	0/0:8,0:8:16.49:0,16,320	0/1:18,0:18:4.57:5,0,386	0/0:15,0:15:33.47:0,33,568	0/0:2,0:2:6.02:0,6,90	0/0:3,0:3:6.02:0,6,109	0/0:12,0:11:27.09:0,27,492	0/0:3,0:3:6.02:0,6,108	0/0:15,0:15:36.12:0,36,657	0/0:13,0:13:39.02:0,39,641	0/0:14,0:14:33.91:0,34,511	0/0:9,0:9:18.06:0,18,322
chr10	26596099	.	G	GT	5233.94	PASS	AC=46;AF=0.852;AN=54;BaseQRankSum=-0.827;DP=271;FS=1.045;HRun=8;HaplotypeScore=47.0427;InbreedingCoeff=0.7343;MQ=49.78;MQ0=5;MQRankSum=2.463;QD=24.23;ReadPosRankSum=1.409;VQSLOD=5.4069;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,12:15:36.57:406,37,0	1/1:0,3:3:9.03:102,9,0	./.	0/0:13,0:5:8.88:0,9,71	1/1:3,14:17:39.05:412,39,0	1/1:1,8:9:18.05:205,18,0	1/1:0,6:6:18.05:205,18,0	0/0:12,0:11:10.79:0,11,35	1/1:2,6:7:15.04:169,15,0	1/1:2,14:16:40.54:431,41,0	1/1:1,11:12:33.08:357,33,0	1/1:0,3:3:6.02:65,6,0	1/1:0,7:7:18.05:206,18,0	1/1:1,7:8:18.05:205,18,0	0/0:9,0:9:24:0,24,216	1/1:0,5:5:9.03:102,9,0	0/0:4,0:3:2.04:0,2,6	1/1:1,6:7:21.06:240,21,0	1/1:7,4:11:8.98:95,9,0	1/1:4,9:13:28.32:307,28,0	1/1:2,1:2:3.01:34,3,0	1/1:0,3:3:6.02:67,6,0	1/1:2,10:11:27.07:299,27,0	1/1:0,3:3:6.01:69,6,0	1/1:5,13:16:36.09:395,36,0	1/1:5,8:13:30.06:326,30,0	1/1:5,9:14:31.32:332,31,0	1/1:5,5:10:18.05:205,18,0
chr10	26598562	.	ACTT	A	249.30	PASS	AC=10;AF=0.500;AN=20;BaseQRankSum=1.893;DP=219;FS=1.927;HRun=0;HaplotypeScore=8.2965;InbreedingCoeff=0.4977;MQ=17.55;MQ0=101;MQRankSum=-2.243;QD=4.79;ReadPosRankSum=0.728;VQSLOD=0.4761;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:4:2.94:0,3,18	./.	0/0:20,0:3:3.01:0,3,51	./.	1/1:6,5:2:2.97:20,3,0	./.	./.	./.	./.	1/1:8,4:2:6.02:91,6,0	1/1:4,6:4:9.03:142,9,0	./.	./.	./.	0/0:24,0:18:36.05:0,36,688	./.	./.	0/0:8,1:4:6.02:0,6,130	./.	1/1:4,6:4:3.01:47,3,0	./.	1/1:7,2:2:3.01:47,3,0	./.	./.	./.	./.	./.	0/0:3,1:1:3.01:0,3,65
chr10	26603518	.	CAGAGAGAGAGAG	C	7771.18	PASS	AB=0.895;AC=42;AF=0.750;AN=56;BaseQRankSum=-3.139;DP=624;FS=1.301;HRun=0;HaplotypeScore=249.0564;InbreedingCoeff=0.3355;MQ=65.21;MQ0=11;MQRankSum=-1.723;QD=16.33;ReadPosRankSum=4.255;VQSLOD=3.0105;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:26,2:27:17.47:107,0,17	1/1:2,8:10:3.01:58,3,0	0/0:46,0:23:5.81:0,6,52	0/0:56,0:28:4.26:0,4,89	0/1:20,3:23:10.36:190,0,10	1/1:14,1:16:5:196,5,0	1/1:20,0:18:17.99:268,18,0	0/0:19,0:31:26.37:0,26,247	1/1:14,3:17:11.18:530,11,0	1/1:15,0:16:32.54:461,33,0	1/1:18,4:23:10.26:185,10,0	1/1:13,2:15:21.04:360,21,0	1/1:23,4:26:30.57:818,31,0	1/1:19,3:25:26.65:428,27,0	0/0:12,0:14:27.94:0,28,833	1/1:7,6:13:26.81:499,27,0	0/1:14,0:19:5.03:190,0,5	0/1:17,1:18:30.27:305,0,30	1/1:5,13:18:16.88:536,17,0	1/1:22,0:24:18.80:324,19,0	1/1:20,1:21:12.89:195,13,0	0/1:20,6:26:10.48:231,0,10	1/1:14,4:18:17.98:188,18,0	1/1:13,3:16:8.61:125,9,0	1/1:15,4:19:23.81:226,24,0	1/1:24,2:27:21.85:635,22,0	1/1:19,7:26:21.57:705,22,0	0/1:11,0:10:14.05:14,0,50
chr10	26603554	.	CAG	C	1429	PASS	AB=0.942;AC=30;AF=0.577;AN=52;BaseQRankSum=-0.075;DP=571;FS=35.260;HRun=0;HaplotypeScore=260.6799;InbreedingCoeff=-0.1430;MQ=40.89;MQ0=18;MQRankSum=2.549;QD=2.94;ReadPosRankSum=2.024;VQSLOD=1.4260;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:28,3:30:9.38:10,0,9	0/1:11,0:11:12.17:12,0,22	./.	./.	1/1:15,0:15:2.88:20,3,0	0/1:18,3:21:7.84:45,0,8	0/1:16,4:18:13.61:68,0,14	0/0:34,0:30:60.18:0,60,817	1/1:12,4:16:3.61:174,4,0	0/1:22,1:22:4.10:4,0,314	0/1:22,2:24:0.02:0,0,0	1/1:13,4:17:1.18:114,1,0	1/1:17,3:18:4.26:270,4,0	0/1:21,2:23:17.82:100,0,18	0/0:21,0:21:53.89:0,54,771	0/1:18,1:19:15.15:158,0,15	0/0:23,0:23:2.71:0,3,59	0/1:17,0:17:11.30:11,0,141	0/1:25,0:23:65.61:66,0,352	1/1:25,0:23:5.97:66,6,0	1/1:21,0:20:7.12:66,7,0	0/1:28,3:29:5.86:69,0,6	0/1:19,0:18:0:0,0,0	1/1:24,2:26:2.53:38,3,0	1/1:21,1:21:0.25:0,0,0	0/1:26,1:26:99:115,0,358	0/1:31,2:31:93.92:158,0,94	0/0:4,0:3:0:0,0,0
chr10	26603566	.	C	CAG	1077.05	PASS	AB=1.000;AC=24;AF=0.444;AN=54;BaseQRankSum=8.039;DP=575;FS=6.679;HRun=0;HaplotypeScore=235.7825;InbreedingCoeff=-0.1532;MQ=40.87;MQ0=16;MQRankSum=-5.730;QD=2.57;ReadPosRankSum=6.744;VQSLOD=1.1486;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:32:11.88:15,0,12	1/1:11,0:11:5.93:40,6,0	0/0:5,0:3:6.02:0,6,81	0/0:21,0:10:12.18:0,12,131	1/1:14,0:14:3.01:35,3,0	0/1:22,0:22:7.42:45,0,7	0/1:22,0:20:20.35:20,0,89	0/0:37,0:33:55.92:0,56,588	0/1:13,0:13:16.89:17,0,66	0/1:19,0:18:99:110,0,185	0/1:24,0:24:0.05:0,0,0	0/1:17,0:17:34.92:40,0,35	0/1:18,0:17:45.12:154,0,45	0/1:22,0:22:24.84:25,0,31	0/0:18,0:18:54.16:0,54,724	0/1:20,0:20:44.92:75,0,45	0/1:24,0:24:48.68:49,0,80	0/1:12,0:13:58.75:100,0,59	0/0:24,0:22:24.47:0,24,382	0/0:23,0:20:0.39:0,0,1	1/1:13,4:17:2.25:9,2,0	0/1:30,0:28:10.65:15,0,11	0/1:17,0:16:0:0,0,0	0/0:26,0:26:2.82:0,3,16	0/1:19,0:18:0.01:0,0,0	0/1:27,0:26:82.11:218,0,82	1/1:37,0:37:29.06:259,29,0	./.
chr10	26603582	.	CAGACAGACAG	C	8525.96	PASS	AB=0.646;AC=44;AF=0.815;AN=54;BaseQRankSum=5.021;DP=623;FS=0.674;HRun=0;HaplotypeScore=240.0582;InbreedingCoeff=0.4557;MQ=47.08;MQ0=19;MQRankSum=-1.712;QD=15.64;ReadPosRankSum=0.729;VQSLOD=3.8606;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:7,29:35:2.61:92,3,0	1/1:7,3:10:12.04:308,12,0	0/0:17,0:6:17.44:0,17,384	0/0:39,0:19:26.62:0,27,681	1/1:5,15:20:2.66:50,3,0	1/1:4,17:21:5.54:177,6,0	0/1:4,15:18:9.34:83,0,9	1/1:10,25:31:75.21:1216,75,0	1/1:3,9:12:3.01:92,3,0	1/1:3,18:20:54.15:1175,54,0	1/1:5,19:24:0.20:1,0,0	1/1:4,8:12:8.68:223,9,0	1/1:5,10:14:15.05:425,15,0	1/1:4,18:22:5.76:164,6,0	0/0:20,0:20:60.21:0,60,2245	1/1:7,11:18:14.84:345,15,0	1/1:5,26:31:6.49:178,6,0	0/1:14,2:16:6.98:366,0,7	1/1:18,0:17:21.05:372,21,0	1/1:4,21:22:2.76:36,3,0	1/1:24,0:24:27.09:466,27,0	1/1:9,24:31:3.21:92,3,0	0/1:6,16:21:0.01:0,0,0	0/1:5,19:24:0.14:0,0,0	1/1:7,17:23:0.06:0,0,0	1/1:6,21:25:63.21:1591,63,0	1/1:7,29:36:39.13:1072,39,0	./.
chr10	26603596	.	CAG	C	1113.98	PASS	AB=0.941;AC=24;AF=0.429;AN=56;BaseQRankSum=8.880;DP=624;FS=4.040;HRun=0;HaplotypeScore=223.2768;InbreedingCoeff=-0.1623;MQ=51.52;MQ0=14;MQRankSum=-6.646;QD=2.60;ReadPosRankSum=7.963;VQSLOD=1.7140;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:31,1:31:2.63:36,3,0	0/1:9,1:10:56.72:57,0,122	0/0:25,0:12:32.73:0,33,534	0/0:51,0:28:48.70:0,49,898	0/1:20,1:21:10.54:11,0,87	1/1:20,1:21:4.75:42,5,0	0/1:17,0:17:13.04:25,0,13	0/1:35,0:33:99:200,0,512	0/1:12,1:13:24.35:24,0,41	0/1:22,0:22:99:124,0,182	0/1:21,1:22:0.17:1,0,0	0/1:12,1:13:32.40:32,0,52	1/1:11,1:12:11.56:67,12,0	0/1:21,1:22:37.13:37,0,62	0/0:22,0:22:66.23:0,66,1265	0/1:14,3:17:2.79:85,0,3	1/1:30,0:30:6.01:65,6,0	0/1:13,1:14:54.47:54,0,154	0/1:14,2:15:47.75:48,0,327	0/0:24,1:23:5.94:0,6,92	0/0:21,2:24:38.33:0,38,500	0/1:26,3:29:29.53:30,0,30	0/1:19,1:19:0:0,0,0	0/0:23,0:23:1.25:0,1,3	0/0:21,1:21:2.94:0,3,24	0/1:24,1:23:84.59:186,0,85	0/1:34,3:37:68.65:145,0,69	0/0:4,0:4:8.99:0,9,85
chr10	26604244	.	CAAATAAAT	C	4573.86	PASS	AC=42;AF=0.955;AN=44;BaseQRankSum=2.700;DP=266;FS=0.000;HRun=0;HaplotypeScore=70.9261;InbreedingCoeff=0.2863;MQ=67.12;MQ0=1;MQRankSum=-3.066;QD=20.98;ReadPosRankSum=-0.907;VQSLOD=3.7385;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,2:12:3.01:73,3,0	1/1:3,1:4:3.01:76,3,0	./.	./.	1/1:12,8:20:20.99:418,21,0	1/1:4,4:8:12.04:299,12,0	1/1:3,0:3:3.01:49,3,0	1/1:28,0:28:7.54:56,8,0	./.	1/1:6,3:9:9.03:228,9,0	1/1:5,5:11:18.06:435,18,0	1/1:2,0:2:3.01:52,3,0	1/1:8,4:12:15.05:379,15,0	1/1:7,4:11:12.04:303,12,0	0/0:10,0:11:18.05:0,18,644	1/1:3,4:7:12.04:303,12,0	1/1:7,0:11:6.02:101,6,0	1/1:5,2:7:3.01:76,3,0	1/1:12,2:14:6.02:152,6,0	1/1:5,6:11:18.06:454,18,0	./.	./.	1/1:6,2:8:3.01:76,3,0	./.	1/1:3,4:7:12.04:303,12,0	1/1:3,6:9:15.05:379,15,0	1/1:11,2:12:6.02:151,6,0	1/1:5,6:11:9.03:212,9,0
chr10	26604638	.	AG	A	15260.08	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=3.724;DP=463;FS=4.210;HRun=1;HaplotypeScore=49.4360;InbreedingCoeff=0.9938;MQ=68.07;MQ0=2;MQRankSum=-4.920;QD=37.77;ReadPosRankSum=3.685;VQSLOD=5.2428;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,21:21:54.18:753,54,0	1/1:0,9:9:23.99:310,24,0	0/0:17,0:13:39.11:0,39,554	0/0:17,0:15:45.14:0,45,636	1/1:0,29:29:87.29:1214,87,0	1/1:1,18:19:45.15:629,45,0	1/1:0,8:8:24.08:335,24,0	1/1:0,23:23:69.22:945,69,0	1/1:1,19:20:54.15:733,54,0	1/1:0,18:18:54.14:717,54,0	1/1:0,15:15:41.97:517,42,0	1/1:0,13:13:36.12:503,36,0	1/1:0,8:8:24.08:335,24,0	1/1:0,10:10:27.09:377,27,0	0/0:25,0:25:75.24:0,75,1148	1/1:0,17:17:45.15:629,45,0	1/1:0,17:17:39.13:544,39,0	1/1:0,12:12:33.05:459,33,0	1/1:0,12:12:36.07:462,36,0	1/1:0,15:15:45.15:629,45,0	1/1:0,19:19:54.18:754,54,0	1/1:0,11:11:30.10:418,30,0	1/1:0,14:14:33.58:462,34,0	1/1:0,9:9:17.65:251,18,0	1/1:0,15:15:45.15:628,45,0	1/1:0,25:25:75.21:993,75,0	1/1:1,26:27:69.23:951,69,0	1/1:0,18:18:51.17:712,51,0
chr10	26605224	.	TG	T	12408.05	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=9.376;DP=438;FS=0.475;HRun=1;HaplotypeScore=45.4876;InbreedingCoeff=0.9559;MQ=54.57;MQ0=6;MQRankSum=3.925;QD=36.28;ReadPosRankSum=3.667;VQSLOD=4.7327;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,37:37:99:1509,108,0	1/1:0,5:5:12.01:147,12,0	0/0:10,0:3:8.99:0,9,116	0/0:20,0:5:14.41:0,14,181	1/1:0,10:9:24.08:335,24,0	1/1:0,16:16:48.16:671,48,0	1/1:0,13:13:33.11:461,33,0	0/0:29,0:28:81.27:0,81,1274	1/1:0,17:17:45.15:629,45,0	1/1:0,16:16:45.15:629,45,0	1/1:0,8:8:24.08:335,24,0	1/1:0,13:13:39.13:545,39,0	1/1:0,13:13:33.11:461,33,0	1/1:0,16:16:39.13:545,39,0	0/0:17,0:17:51.16:0,51,792	1/1:0,14:14:33.11:462,33,0	0/0:20,0:20:60.20:0,60,957	1/1:1,20:21:12.65:749,13,0	1/1:1,20:19:51.10:640,51,0	1/1:0,9:9:24.08:335,24,0	1/1:1,21:22:59.56:804,60,0	1/1:0,8:7:12.04:168,12,0	1/1:0,9:9:24.45:291,24,0	1/1:0,17:17:42.14:587,42,0	1/1:0,15:15:39.13:544,39,0	1/1:0,18:18:54.16:723,54,0	1/1:0,19:19:45.15:627,45,0	1/1:0,5:5:15.05:209,15,0
chr10	26605385	.	ATT	A	8263.30	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=2.150;DP=423;FS=18.804;HRun=11;HaplotypeScore=64.4024;InbreedingCoeff=0.9320;MQ=54.19;MQ0=3;MQRankSum=0.576;QD=21.80;ReadPosRankSum=2.462;VQSLOD=2.4260;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,15:16:39.08:415,39,0	1/1:1,5:6:15.04:160,15,0	0/0:10,0:4:12:0,12,146	0/0:11,0:6:11.51:0,12,124	1/1:4,30:34:72.94:851,73,0	1/1:0,12:12:27.07:287,27,0	1/1:1,9:10:15.04:160,15,0	1/1:11,0:24:31.15:128,31,0	1/1:2,7:9:15.01:160,15,0	1/1:2,12:16:20.97:334,21,0	1/1:1,13:13:33.07:351,33,0	1/1:1,7:8:15.03:160,15,0	1/1:1,6:8:20.77:203,21,0	1/1:4,10:13:21.02:223,21,0	0/0:18,0:21:47.60:0,48,606	1/1:0,5:5:15.04:160,15,0	1/1:3,0:19:38.34:167,38,0	1/1:3,5:8:12.01:127,12,0	1/1:3,9:12:27.04:279,27,0	1/1:1,36:37:96.18:1022,96,0	1/1:2,16:18:48.11:511,48,0	1/1:1,15:17:32.79:331,33,0	1/1:3,12:15:33.08:351,33,0	1/1:0,12:12:30.07:319,30,0	1/1:2,13:15:36.08:383,36,0	1/1:4,14:18:42.08:447,42,0	1/1:1,17:18:42.10:447,42,0	1/1:2,10:12:27.06:287,27,0
chr10	26605563	.	T	TCTGG	9683.11	PASS	AB=0.957;AC=47;AF=0.839;AN=56;BaseQRankSum=12.752;DP=275;FS=41.313;HRun=0;HaplotypeScore=125.0131;InbreedingCoeff=0.7140;MQ=61.05;MQ0=0;MQRankSum=-12.270;QD=55.65;ReadPosRankSum=1.557;VQSLOD=3.5379;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,4:7:15.05:409,15,0	1/1:3,0:3:6.02:147,6,0	0/0:19,0:17:48.15:0,48,844	0/0:14,0:9:25.90:0,26,414	1/1:4,3:7:15.05:386,15,0	1/1:4,7:10:30.06:757,30,0	1/1:3,1:4:12.04:327,12,0	0/0:44,0:44:99:0,123,2349	1/1:4,3:7:21.03:484,21,0	1/1:6,2:8:24.04:573,24,0	1/1:5,4:8:24.08:613,24,0	1/1:4,5:8:24.04:581,24,0	1/1:3,2:5:12.04:319,12,0	1/1:1,4:5:15.05:400,15,0	0/0:24,0:24:69.24:0,69,1338	1/1:5,1:5:15.05:382,15,0	0/1:21,1:22:14.83:15,0,1155	1/1:2,2:5:12.01:267,12,0	1/1:2,2:4:12.04:328,12,0	1/1:4,10:14:39.13:1047,39,0	1/1:4,1:5:6.02:158,6,0	1/1:4,2:5:9.03:241,9,0	1/1:7,1:8:18.06:467,18,0	1/1:0,4:4:6.02:164,6,0	1/1:4,4:8:21.07:533,21,0	1/1:6,1:7:21.07:558,21,0	1/1:6,2:8:18.06:444,18,0	1/1:0,1:1:3.01:82,3,0
chr10	26607097	.	CA	C	434.30	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=5.233;DP=445;FS=4.501;HRun=11;HaplotypeScore=172.2282;InbreedingCoeff=0.3609;MQ=50.11;MQ0=17;MQRankSum=-5.126;QD=9.24;ReadPosRankSum=1.862;VQSLOD=0.9961;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:18.48:0,18,74	0/0:7,0:7:12.53:0,13,49	0/0:36,1:16:14.03:0,14,200	0/0:32,0:14:9.58:0,10,75	0/0:22,0:22:21.72:0,22,108	0/0:18,0:18:3.92:0,4,47	0/0:12,0:12:5.99:0,6,46	1/1:10,11:20:5.12:247,5,0	0/0:14,0:14:5.13:0,5,34	0/0:27,0:24:16.08:0,16,88	0/0:17,0:16:5.45:0,5,50	0/1:9,0:9:2:2,0,17	0/0:17,0:17:12.90:0,13,71	0/0:16,0:16:11.94:0,12,69	0/0:12,0:13:29.91:0,30,301	0/0:11,0:11:9.78:0,10,45	1/1:6,11:17:35.93:294,36,0	0/0:10,0:10:15.76:0,16,64	0/0:11,0:7:0.22:0,0,13	0/0:16,0:16:8.35:0,8,66	0/0:8,0:8:10.71:0,11,44	0/0:7,0:7:2.24:0,2,15	0/0:13,0:13:1.56:0,2,25	0/0:13,0:13:13.39:0,13,55	0/0:10,0:9:9.41:0,9,50	0/0:20,0:18:7.54:0,8,76	0/0:23,0:23:2.35:0,2,58	0/0:9,0:9:16.07:0,16,67
chr10	26607102	.	A	AC	7575.53	PASS	AB=0.529;AC=45;AF=0.804;AN=56;BaseQRankSum=1.214;DP=408;FS=34.508;HRun=0;HaplotypeScore=147.3373;InbreedingCoeff=0.8653;MQ=48.58;MQ0=16;MQRankSum=0.400;QD=26.12;ReadPosRankSum=4.815;VQSLOD=2.6991;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,10:11:21.07:283,21,0	1/1:0,6:6:14.88:176,15,0	0/0:39,0:17:23.13:0,23,333	0/0:34,0:11:11.74:0,12,110	1/1:6,13:19:6.30:379,6,0	1/1:3,12:15:32.97:418,33,0	1/1:0,12:12:29.92:344,30,0	0/0:19,0:18:49.47:0,49,357	1/1:0,12:12:26.76:269,27,0	1/1:6,21:24:48.98:693,49,0	1/1:2,11:12:35.76:403,36,0	1/1:3,4:7:18.01:181,18,0	1/1:2,14:16:32.98:455,33,0	1/1:0,14:14:32.89:395,33,0	0/0:11,0:11:19.22:0,19,363	1/1:3,6:9:17.95:211,18,0	0/0:15,0:15:42.95:0,43,303	0/1:1,8:9:0.93:201,0,1	1/1:6,5:7:9.29:170,9,0	1/1:1,15:16:47.43:495,47,0	1/1:0,8:8:14.94:178,15,0	1/1:1,2:3:9.03:111,9,0	1/1:0,12:12:18.86:252,19,0	1/1:5,7:12:17.98:220,18,0	1/1:0,8:8:23.91:284,24,0	1/1:3,16:17:47.97:531,48,0	1/1:4,19:23:55.07:683,55,0	1/1:0,8:8:18.06:244,18,0
chr10	26607125	.	CCAAAAAAG	C	10232.93	PASS	AB=1.000;AC=47;AF=0.870;AN=54;BaseQRankSum=5.958;DP=260;FS=49.332;HRun=0;HaplotypeScore=180.2190;InbreedingCoeff=0.4820;MQ=50.61;MQ0=8;MQRankSum=-3.109;QD=42.28;ReadPosRankSum=2.552;VQSLOD=2.7510;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,1:3:6.02:91,6,0	1/1:2,1:3:9.03:133,9,0	0/1:24,0:10:28.50:28,0,62	0/1:22,0:7:20.04:20,0,42	1/1:5,5:10:27.08:421,27,0	1/1:6,8:15:42.13:776,42,0	1/1:0,5:5:15.05:390,15,0	0/1:9,0:8:0.95:1,0,228	1/1:1,6:7:21.07:483,21,0	1/1:10,8:16:28.31:970,28,0	1/1:2,7:9:27.09:558,27,0	1/1:2,3:5:15.05:309,15,0	1/1:4,9:14:39.12:777,39,0	1/1:3,4:8:24.06:458,24,0	0/0:9,0:9:24.06:0,24,514	1/1:1,3:4:12.04:235,12,0	0/0:9,0:9:15.89:0,16,175	1/1:2,1:3:6.02:108,6,0	1/1:5,3:7:18.06:371,18,0	1/1:6,10:16:48.16:921,48,0	1/1:1,0:1:3.01:38,3,0	1/1:2,1:3:9.03:157,9,0	1/1:4,10:14:39.13:739,39,0	1/1:4,2:7:15.01:191,15,0	1/1:2,3:5:15.05:305,15,0	1/1:4,6:8:24.08:570,24,0	1/1:7,12:19:51.17:1181,51,0	./.
chr10	26607194	.	A	AC	3544.25	PASS	AB=1.000;AC=49;AF=0.942;AN=52;BaseQRankSum=3.042;DP=176;FS=24.368;HRun=0;HaplotypeScore=191.4082;InbreedingCoeff=0.3529;MQ=57.86;MQ0=0;MQRankSum=-2.797;QD=20.97;ReadPosRankSum=2.467;VQSLOD=1.7953;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,3:3:5.92:39,6,0	1/1:0,6:6:14.14:110,14,0	0/0:7,0:6:10.21:0,10,92	0/1:3,0:3:12.66:13,0,35	1/1:0,10:10:15.48:124,15,0	1/1:0,9:9:26.71:222,27,0	1/1:0,1:1:2.97:20,3,0	1/1:0,7:7:21.04:260,21,0	1/1:0,2:2:5.93:40,6,0	1/1:0,6:6:17.96:150,18,0	1/1:0,12:12:28.99:247,29,0	1/1:0,8:8:23.81:203,24,0	1/1:0,8:8:23.60:150,24,0	1/1:0,6:6:11.86:78,12,0	1/1:0,4:4:11.84:96,12,0	1/1:0,5:5:8.90:60,9,0	1/1:0,2:2:5.46:29,5,0	1/1:0,3:3:8.97:70,9,0	1/1:0,6:6:14.76:151,15,0	1/1:0,17:17:50.25:388,50,0	./.	1/1:0,13:13:38.43:310,38,0	1/1:0,5:5:14.62:85,15,0	1/1:0,5:5:4.51:31,5,0	1/1:0,8:8:23.40:184,23,0	1/1:0,9:9:26.97:225,27,0	1/1:0,11:11:30.97:261,31,0	./.
chr10	26607205	.	AG	A	3108.40	PASS	AC=44;AF=0.846;AN=52;BaseQRankSum=-3.022;DP=147;FS=10.078;HRun=1;HaplotypeScore=160.3820;InbreedingCoeff=0.4664;MQ=54.53;MQ0=0;MQRankSum=-0.785;QD=22.52;ReadPosRankSum=-1.377;VQSLOD=2.1769;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,2:3:6.02:71,6,0	1/1:3,2:5:4.72:75,5,0	0/0:5,0:5:8.11:0,8,68	0/0:1,0:1:3:0,3,26	1/1:3,6:9:3.92:128,4,0	1/1:2,6:8:21.31:228,21,0	1/1:0,1:1:3.01:36,3,0	1/1:0,7:7:21.07:263,21,0	1/1:0,2:2:6.02:73,6,0	1/1:2,2:4:5.63:74,6,0	1/1:4,7:11:17.97:203,18,0	1/1:2,5:7:19.79:197,20,0	1/1:2,5:7:9.92:174,10,0	1/1:2,2:4:6.02:72,6,0	1/1:1,3:4:11.40:116,11,0	1/1:1,3:4:6.02:74,6,0	0/0:1,0:1:1.25:0,1,3	1/1:1,1:2:2.35:38,2,0	1/1:1,4:5:9.50:118,10,0	1/1:6,9:15:26.21:302,26,0	./.	1/1:4,9:13:27.04:322,27,0	0/0:1,0:1:1.55:0,2,4	1/1:1,3:4:8.06:76,8,0	1/1:5,3:8:16.73:133,17,0	1/1:0,8:8:24.08:299,24,0	1/1:3,4:7:13.39:151,13,0	./.
chr10	26613365	.	A	AC	1906.61	PASS	AB=0.727;AC=38;AF=0.704;AN=54;BaseQRankSum=6.280;DP=262;FS=34.025;HRun=0;HaplotypeScore=80.7697;InbreedingCoeff=0.4625;MQ=47.74;MQ0=14;MQRankSum=-3.866;QD=10.03;ReadPosRankSum=5.316;VQSLOD=1.9648;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:8,2:8:0.62:30,0,1	1/1:0,1:1:2.94:18,3,0	0/0:26,0:8:6.32:0,6,46	0/0:13,0:2:1.55:0,2,4	1/1:1,7:7:14.63:87,15,0	1/1:2,7:9:14.18:120,14,0	1/1:3,5:6:5.35:64,5,0	0/0:19,0:13:35.61:0,36,271	1/1:1,5:6:2.84:77,3,0	1/1:3,11:11:25.01:185,25,0	1/1:5,11:14:22.32:158,22,0	1/1:0,3:3:8.83:55,9,0	1/1:1,7:8:4.49:110,4,0	1/1:2,6:8:20.04:118,20,0	0/0:1,0:1:3.01:0,3,42	1/1:3,5:8:3.51:74,4,0	0/0:10,0:10:23.38:0,23,147	0/1:3,4:5:3.76:45,0,4	1/1:5,4:8:6.07:71,6,0	1/1:5,13:15:25.22:185,25,0	0/1:3,1:2:3.58:9,0,4	./.	0/1:3,4:7:3.09:55,0,3	0/0:2,1:3:2.84:0,3,14	1/1:3,10:12:17.10:137,17,0	1/1:2,14:14:41.12:261,41,0	1/1:3,7:10:7.79:113,8,0	1/1:3,4:6:9.59:88,10,0
chr10	26613369	.	A	ACAAAAC	10630.71	PASS	AB=0.646;AC=48;AF=0.857;AN=56;BaseQRankSum=1.833;DP=279;FS=18.752;HRun=0;HaplotypeScore=66.4994;InbreedingCoeff=0.4089;MQ=52.82;MQ0=14;MQRankSum=-4.405;QD=46.02;ReadPosRankSum=5.927;VQSLOD=3.0644;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,1:8:14.62:165,15,0	1/1:1,1:2:6:108,6,0	0/0:30,0:12:0.92:0,1,86	0/0:15,0:3:2.74:0,3,12	1/1:1,5:7:17.95:431,18,0	1/1:2,7:9:24.08:622,24,0	1/1:4,5:7:8.19:280,8,0	0/1:9,0:13:66.69:67,0,111	1/1:1,5:6:0.90:404,1,0	1/1:3,7:11:32.89:741,33,0	1/1:7,9:16:39.10:884,39,0	1/1:0,3:3:9.03:252,9,0	1/1:1,7:8:24:606,24,0	1/1:2,5:8:20.81:490,21,0	0/0:3,0:3:9.01:0,9,130	1/1:3,4:8:21.13:417,21,0	1/1:0,0:12:24.04:231,24,0	1/1:3,2:5:18.03:296,18,0	1/1:5,2:8:23.90:383,24,0	1/1:6,10:16:38.74:908,39,0	1/1:4,0:3:9.01:142,9,0	1/1:1,0:1:3:25,3,0	1/1:4,3:8:20.95:416,21,0	1/1:1,0:3:3.01:79,3,0	1/1:3,7:12:26.30:630,26,0	1/1:2,12:14:42.11:1119,42,0	1/1:2,6:9:24.08:576,24,0	0/1:3,4:6:0.36:359,0,0
chr10	26613794	.	GA	G	1086	PASS	AB=0.556;AC=3;AF=0.054;AN=56;BaseQRankSum=7.078;DP=475;FS=0.000;HRun=5;HaplotypeScore=43.0252;InbreedingCoeff=0.7222;MQ=59.56;MQ0=4;MQRankSum=2.096;QD=26.49;ReadPosRankSum=-1.865;VQSLOD=1.8618;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:63.21:0,63,862	0/0:7,0:7:21.07:0,21,287	0/0:16,0:11:27.02:0,27,324	0/0:13,0:12:30.10:0,30,395	0/0:30,0:30:84.28:0,84,1149	0/0:15,0:15:36.08:0,36,471	0/0:11,0:11:30.10:0,30,411	1/1:0,26:26:78.22:885,78,0	0/0:14,0:14:42.14:0,42,575	0/0:20,0:20:57.19:0,57,780	0/0:20,0:20:57.17:0,57,763	0/0:11,0:11:30.09:0,30,395	0/0:10,0:10:30.10:0,30,410	0/0:17,0:17:51.15:0,51,678	0/0:15,0:15:45.15:0,45,615	0/0:10,0:10:30.10:0,30,410	0/1:3,12:15:6.48:307,0,6	0/0:14,0:14:39.13:0,39,533	0/0:27,0:25:69.23:0,69,944	0/0:24,0:23:69.22:0,69,927	0/0:14,0:14:42.12:0,42,557	0/0:17,0:17:51.16:0,51,681	0/0:26,0:26:72.24:0,72,984	0/0:8,0:8:21.07:0,21,287	0/0:13,0:13:33.11:0,33,451	0/0:24,0:24:63.18:0,63,842	0/0:23,0:22:66.22:0,66,902	0/0:12,0:12:36.12:0,36,492
chr10	26614544	.	T	TG	21066.73	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-11.546;DP=603;FS=7.864;HRun=1;HaplotypeScore=53.4741;InbreedingCoeff=0.9765;MQ=90.31;MQ0=0;MQRankSum=-8.138;QD=40.05;ReadPosRankSum=5.133;VQSLOD=4.9530;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,34:40:85.66:1301,86,0	1/1:1,4:5:9.03:135,9,0	0/0:25,0:25:72.09:0,72,846	0/0:22,0:22:62.92:0,63,730	1/1:0,14:14:42.14:629,42,0	1/1:0,19:19:51.17:764,51,0	1/1:0,23:23:66.22:989,66,0	1/1:1,29:30:87.27:1280,87,0	1/1:0,19:19:54.18:809,54,0	1/1:0,18:18:54.18:809,54,0	1/1:0,12:12:33.11:494,33,0	1/1:1,15:16:36.12:539,36,0	1/1:0,23:23:66.22:989,66,0	1/1:0,18:18:51.17:763,51,0	0/0:30,0:30:81.26:0,81,1051	1/1:2,12:14:33.11:494,33,0	1/1:0,21:21:63.21:944,63,0	1/1:0,6:6:18.06:264,18,0	1/1:2,13:15:42.14:612,42,0	1/1:1,20:21:54.18:808,54,0	1/1:0,42:42:99:1798,120,0	1/1:1,19:20:51.17:764,51,0	1/1:1,18:19:45.15:674,45,0	1/1:1,48:49:99:2068,138,0	1/1:0,17:17:42.14:628,42,0	1/1:1,21:22:60.14:849,60,0	1/1:1,23:24:60.20:898,60,0	1/1:0,19:19:51.17:764,51,0
chr10	26614729	.	ATGTGTGTGTGTG	A	2760.40	PASS	AB=0.894;AC=29;AF=0.630;AN=46;BaseQRankSum=2.246;DP=504;FS=1.044;HRun=0;HaplotypeScore=184.5610;InbreedingCoeff=0.0533;MQ=64.86;MQ0=18;MQRankSum=-2.766;QD=8.12;ReadPosRankSum=3.499;VQSLOD=2.3723;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:45,1:45:12.16:266,0,12	./.	./.	./.	1/1:14,1:15:3.01:102,3,0	0/1:10,0:16:34.71:35,0,112	0/1:29,0:36:55.55:118,0,56	0/0:28,0:26:14.33:0,14,145	0/1:16,1:16:36.55:102,0,37	1/1:15,0:16:2.85:43,3,0	1/1:4,1:6:5.38:69,5,0	1/1:9,7:16:15.05:512,15,0	1/1:12,6:18:6.02:205,6,0	1/1:10,5:14:6.02:205,6,0	0/0:11,0:15:8.57:0,9,309	1/1:6,5:11:9.03:307,9,0	0/1:11,0:16:38.07:38,0,143	0/1:8,0:9:29.63:91,0,30	0/0:22,0:20:3.95:0,4,96	./.	0/1:26,0:24:0:0,0,0	./.	1/1:10,0:11:6.02:154,6,0	0/1:16,0:16:0:0,0,0	1/1:7,0:7:3.01:82,3,0	0/1:19,2:19:54.89:95,0,55	1/1:16,4:20:14.86:476,15,0	0/0:5,0:4:3.01:0,3,40
chr10	26615031	.	A	AAATAAT	2699.18	PASS	AC=38;AF=0.950;AN=40;BaseQRankSum=0.400;DP=168;FS=0.000;HRun=0;HaplotypeScore=43.5017;InbreedingCoeff=0.1083;MQ=71.43;MQ0=2;MQRankSum=-0.733;QD=19.28;ReadPosRankSum=1.199;VQSLOD=2.3610;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,2:8:8.88:131,9,0	1/1:2,3:5:6.02:194,6,0	./.	./.	1/1:5,5:10:15.05:483,15,0	1/1:2,1:3:3.01:97,3,0	1/1:4,0:6:6.02:117,6,0	1/1:22,0:21:4.09:18,4,0	./.	1/1:3,0:7:6.02:157,6,0	1/1:3,0:6:8.95:170,9,0	1/1:3,1:4:3.01:97,3,0	./.	1/1:2,0:5:3.01:78,3,0	./.	./.	1/1:23,0:23:24.61:66,25,0	1/1:8,2:11:9.01:157,9,0	0/0:2,0:2:3.01:0,3,61	1/1:3,0:3:3.01:37,3,0	1/1:1,2:3:3.01:97,3,0	./.	1/1:2,1:3:3.01:97,3,0	./.	1/1:1,4:5:9.03:291,9,0	1/1:1,0:2:2.94:18,3,0	1/1:3,6:9:12.04:386,12,0	1/1:1,1:3:3.01:97,3,0
chr10	26615058	.	T	TAAC	2047.31	PASS	AB=1.000;AC=21;AF=0.404;AN=52;BaseQRankSum=-0.911;DP=166;FS=17.353;HRun=0;HaplotypeScore=31.5321;InbreedingCoeff=-0.2852;MQ=53.85;MQ0=2;MQRankSum=0.556;QD=14.94;ReadPosRankSum=5.341;VQSLOD=1.1924;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:10,0:9:49.67:50,0,50	0/1:4,0:4:18.36:32,0,18	./.	./.	0/1:8,0:8:20.05:90,0,20	0/1:3,0:3:12.23:12,0,40	1/1:3,0:3:5.68:37,6,0	1/1:2,25:26:71.89:718,72,0	0/0:4,0:4:8.93:0,9,67	0/1:9,0:9:19.51:20,0,110	0/1:4,0:4:16.07:31,0,16	0/1:2,0:2:15.24:15,0,19	0/0:3,0:3:5.87:0,6,35	0/1:5,0:5:13.32:13,0,26	0/0:2,0:2:3:0,3,25	0/0:3,0:3:8.88:0,9,61	1/1:0,16:17:42.14:963,42,0	0/1:12,0:12:51.05:51,0,94	0/0:7,0:7:17.84:0,18,158	0/0:4,0:4:8.99:0,9,75	0/1:3,0:3:16.26:16,0,18	0/0:1,0:1:3:0,3,25	0/1:4,0:4:13:13,0,41	0/0:1,0:1:2.99:0,3,24	0/1:5,0:5:13.05:52,0,13	0/1:5,0:5:15.27:15,0,77	0/1:9,0:9:31.08:64,0,31	0/1:7,0:6:12.06:12,0,33
chr10	26615207	.	GTGGAAGAGGCA	G	7817.92	PASS	AB=0.964;AC=34;AF=0.607;AN=56;BaseQRankSum=13.963;DP=338;FS=65.868;HRun=0;HaplotypeScore=173.6607;InbreedingCoeff=0.0733;MQ=99.08;MQ0=0;MQRankSum=-13.394;QD=34.29;ReadPosRankSum=7.398;VQSLOD=1.5691;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:22:12.18:765,12,0	1/1:3,0:3:6.02:111,6,0	0/0:24,0:24:66.19:0,66,2848	0/0:23,0:23:69.21:0,69,2584	0/1:7,0:7:35.93:230,0,36	1/1:14,0:14:30.10:555,30,0	1/1:11,1:12:6.13:506,6,0	0/0:24,0:24:72.24:0,72,3736	1/1:10,0:10:21.07:390,21,0	0/1:9,0:9:0.92:378,0,1	0/1:6,1:7:16.90:285,0,17	0/1:15,1:16:24.81:534,0,25	0/1:10,1:11:9.74:439,0,10	1/1:16,0:16:20.16:723,20,0	0/0:12,0:12:36.12:0,36,1823	1/1:10,0:10:5.09:369,5,0	0/0:27,0:27:81.25:0,81,4360	0/1:5,0:5:25.82:195,0,26	0/1:6,0:6:22.80:249,0,23	0/1:4,1:5:6.93:223,0,7	0/1:20,0:20:44.04:95,0,44	1/1:9,1:10:6.11:469,6,0	1/1:5,0:5:9.03:174,9,0	0/1:12,0:12:87.72:141,0,88	1/1:7,0:7:6.08:334,6,0	1/1:8,0:8:21.07:395,21,0	0/1:4,0:4:24.71:109,0,25	0/1:9,0:9:20.93:148,0,21
chr10	26615210	.	GAAGAGGCAGGGCAA	G	18784.63	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=11.715;DP=328;FS=69.664;HRun=0;HaplotypeScore=149.9712;InbreedingCoeff=0.8735;MQ=97.35;MQ0=0;MQRankSum=-13.103;QD=85.00;ReadPosRankSum=5.730;VQSLOD=2.0078;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,20:24:45.15:1854,45,0	1/1:0,3:3:6.02:259,6,0	0/0:22,0:22:63.22:0,63,3184	0/0:22,0:22:63.15:0,63,2860	1/1:1,5:6:18.04:630,18,0	1/1:1,13:14:30.57:1296,31,0	1/1:1,10:11:27.09:1167,27,0	0/0:25,0:25:75.25:0,75,4851	1/1:0,10:10:21.07:908,21,0	1/1:0,9:9:24.07:934,24,0	1/1:2,4:6:15.05:648,15,0	1/1:4,10:14:30.10:1297,30,0	1/1:2,9:11:24.08:1038,24,0	1/1:2,13:15:39.13:1684,39,0	0/0:12,0:12:33.11:0,33,2182	1/1:1,9:10:21.07:908,21,0	0/0:26,0:26:78.27:0,78,5114	1/1:1,4:5:12.04:519,12,0	1/1:1,5:6:15.05:649,15,0	1/1:2,3:5:12.04:518,12,0	1/1:13,6:19:6.02:259,6,0	1/1:1,8:9:27.09:1091,27,0	1/1:0,4:4:9.03:389,9,0	1/1:5,8:13:12:400,12,0	1/1:1,6:7:18.06:778,18,0	1/1:0,7:7:21.07:908,21,0	1/1:2,3:5:6.02:259,6,0	1/1:1,7:8:9.03:389,9,0
chr10	26615221	.	GCAA	G	3497.52	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=13.592;DP=294;FS=48.557;HRun=0;HaplotypeScore=132.4245;InbreedingCoeff=0.8674;MQ=103.72;MQ0=0;MQRankSum=-13.262;QD=19.11;ReadPosRankSum=6.007;VQSLOD=1.5921;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:20:44.91:373,45,0	1/1:3,0:3:5.99:48,6,0	0/0:21,0:21:49.17:0,49,1387	0/0:21,0:21:57.09:0,57,1190	1/1:5,0:5:11.97:96,12,0	1/1:13,0:13:29.88:237,30,0	1/1:10,1:11:26.95:219,27,0	0/0:30,0:30:87.30:0,87,2098	1/1:10,0:10:20.95:167,21,0	1/1:9,0:9:23.95:194,24,0	1/1:4,1:5:14.97:120,15,0	1/1:10,1:11:29.93:239,30,0	1/1:9,1:10:23.94:192,24,0	1/1:14,0:14:38.90:310,39,0	0/0:12,0:12:36.12:0,36,881	1/1:9,0:9:20.95:167,21,0	0/0:27,0:27:81.28:0,81,1935	1/1:4,0:4:11.97:96,12,0	1/1:5,0:5:14.97:119,15,0	1/1:3,1:4:11.97:95,12,0	1/1:6,0:6:5.99:48,6,0	1/1:8,1:9:24.42:194,24,0	1/1:4,0:4:8.98:72,9,0	1/1:8,0:8:11.82:83,12,0	1/1:6,0:6:17.96:144,18,0	1/1:7,0:7:20.95:168,21,0	1/1:3,0:3:5.99:48,6,0	1/1:7,0:7:8.98:72,9,0
chr10	26615856	.	T	TCTCTCG	5112.66	PASS	AB=0.843;AC=43;AF=0.768;AN=56;BaseQRankSum=-1.034;DP=542;FS=9.315;HRun=0;HaplotypeScore=176.8343;InbreedingCoeff=0.4451;MQ=67.65;MQ0=18;MQRankSum=-0.419;QD=12.12;ReadPosRankSum=5.652;VQSLOD=2.7119;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:18:27.94:244,28,0	1/1:6,0:6:3.01:51,3,0	0/0:35,0:12:26.11:0,26,223	0/0:49,0:24:33.23:0,33,381	1/1:25,0:24:7.70:74,8,0	1/1:9,15:26:6.85:57,7,0	1/1:17,0:16:31.29:284,31,0	0/0:22,0:20:37.53:0,38,262	1/1:18,0:16:29.78:297,30,0	1/1:19,0:19:29.30:451,29,0	1/1:19,0:18:30.26:255,30,0	0/1:13,0:13:3.93:164,0,4	0/1:7,7:16:11.57:97,0,12	1/1:19,0:19:9.63:151,10,0	0/0:13,0:13:36.08:0,36,654	1/1:11,0:11:23.58:253,24,0	0/1:22,0:21:12.85:13,0,149	1/1:10,0:10:26.74:266,27,0	1/1:14,0:12:22.58:221,23,0	1/1:30,0:30:41.09:433,41,0	1/1:11,0:9:2.77:101,3,0	0/1:6,17:23:11.15:51,0,11	1/1:7,16:24:11.66:217,12,0	0/1:12,0:12:20.82:217,0,21	1/1:18,0:17:14.07:185,14,0	1/1:8,13:22:23.26:404,23,0	1/1:20,2:22:20.10:462,20,0	1/1:7,0:6:13.18:163,13,0
chr10	26615858	.	T	TCTCG	3677.59	PASS	AB=0.990;AC=36;AF=0.643;AN=56;BaseQRankSum=-2.810;DP=539;FS=39.345;HRun=0;HaplotypeScore=159.6221;InbreedingCoeff=0.1655;MQ=67.07;MQ0=19;MQRankSum=1.348;QD=8.74;ReadPosRankSum=7.932;VQSLOD=1.2735;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:18:23.62:235,24,0	1/1:2,4:6:3:77,3,0	0/0:35,0:12:29.01:0,29,233	0/0:49,0:23:35.08:0,35,403	1/1:25,0:24:8.13:58,8,0	0/1:24,0:24:9.94:10,0,11	1/1:17,0:16:30.56:214,31,0	0/0:21,0:19:40.57:0,41,296	1/1:18,0:16:28.34:276,28,0	0/1:19,0:19:1.45:279,0,1	1/1:18,0:17:14.22:219,14,0	0/1:13,0:13:1.20:163,0,1	0/1:16,0:16:2.20:2,0,30	0/1:20,0:20:0.16:137,0,0	0/0:13,0:13:39.07:0,39,596	1/1:10,0:10:20.52:193,21,0	0/1:21,0:20:22.88:23,0,181	1/1:11,0:11:7.28:147,7,0	1/1:14,0:12:16.20:143,16,0	1/1:29,0:29:24.36:374,24,0	1/1:11,0:9:1.87:75,2,0	0/1:23,0:22:10.30:17,0,10	1/1:25,1:26:8.70:112,9,0	0/1:11,1:12:8.95:159,0,9	0/1:19,0:18:9.76:129,0,10	0/1:21,0:21:32.63:276,0,33	0/1:22,1:23:1.58:320,0,2	0/1:7,0:6:36.01:38,0,36
chr10	26615860	.	T	TCG	2824.62	PASS	AB=1.000;AC=34;AF=0.607;AN=56;BaseQRankSum=-2.554;DP=532;FS=51.347;HRun=0;HaplotypeScore=145.0677;InbreedingCoeff=0.1310;MQ=66.54;MQ0=20;MQRankSum=1.941;QD=7.15;ReadPosRankSum=8.170;VQSLOD=1.0704;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:19,0:19:15.05:207,0,15	1/1:5,0:5:3.01:41,3,0	0/0:35,0:12:29.21:0,29,221	0/0:47,0:21:33.84:0,34,378	1/1:8,19:26:5.71:63,6,0	0/1:24,0:24:8.52:9,0,13	1/1:17,0:16:29.45:204,29,0	0/0:21,0:19:47.65:0,48,365	1/1:18,0:16:8.07:198,8,0	0/1:19,0:19:17.39:267,0,17	1/1:19,0:17:10.37:205,10,0	0/1:14,0:14:1.27:141,0,1	0/1:16,0:16:3.30:3,0,28	0/1:21,0:21:1.74:139,0,2	0/0:13,0:13:39.07:0,39,510	1/1:10,0:10:20.18:140,20,0	0/0:21,0:20:27.37:0,27,282	0/1:11,0:11:12.36:118,0,12	1/1:12,0:10:6.21:130,6,0	1/1:28,1:29:22.75:325,23,0	1/1:10,0:8:2.04:75,2,0	0/1:21,0:20:16.40:17,0,16	1/1:27,0:27:8.51:59,9,0	1/1:11,0:11:8.89:72,9,0	0/1:18,0:17:30.88:126,0,31	0/1:18,0:18:74.83:147,0,75	0/1:22,0:22:1.24:276,0,1	0/1:7,0:6:37.52:38,0,38
chr10	26615901	.	T	TTC	8940.28	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=5.848;DP=444;FS=6.002;HRun=0;HaplotypeScore=131.6635;InbreedingCoeff=0.8444;MQ=54.17;MQ0=13;MQRankSum=-4.401;QD=24.63;ReadPosRankSum=-1.871;VQSLOD=5.3636;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:22:42.02:557,42,0	1/1:3,0:3:9.02:113,9,0	0/0:24,0:10:10.53:0,11,201	0/0:43,0:15:14.71:0,15,212	1/1:28,0:28:60.03:800,60,0	1/1:16,0:15:21.07:286,21,0	1/1:14,0:13:20.86:249,21,0	1/1:14,0:14:27.09:400,27,0	1/1:16,0:16:24.08:370,24,0	1/1:14,0:14:21.07:313,21,0	1/1:19,0:16:36.12:496,36,0	1/1:10,0:10:18.06:265,18,0	1/1:10,0:9:18.05:268,18,0	1/1:15,0:15:30.09:388,30,0	0/0:12,0:12:27.09:0,27,350	1/1:11,0:11:15.05:210,15,0	1/1:21,0:21:49.37:647,49,0	1/1:8,0:8:14.54:185,15,0	1/1:8,0:7:15.04:197,15,0	1/1:22,0:22:54.07:748,54,0	1/1:5,0:4:3.01:48,3,0	1/1:18,0:17:36.11:474,36,0	1/1:24,0:24:45.14:602,45,0	1/1:11,0:11:11.89:162,12,0	1/1:16,0:15:22.22:351,22,0	1/1:18,0:18:35.94:494,36,0	1/1:10,4:14:9.47:115,9,0	1/1:5,0:5:15.04:203,15,0
chr10	26615907	.	C	CTC	8600.55	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=5.404;DP=436;FS=10.075;HRun=0;HaplotypeScore=132.1820;InbreedingCoeff=0.8398;MQ=60.26;MQ0=8;MQRankSum=-4.213;QD=24.57;ReadPosRankSum=-1.346;VQSLOD=5.1211;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:24:35.89:514,36,0	1/1:3,0:3:6.01:76,6,0	0/0:28,0:13:10.53:0,11,201	0/0:46,0:17:14.71:0,15,212	1/1:29,0:29:60.03:800,60,0	1/1:13,0:12:21.07:286,21,0	1/1:12,0:11:21.04:250,21,0	1/1:5,10:15:27.09:400,27,0	1/1:14,0:14:24.08:370,24,0	1/1:12,0:12:21.07:313,21,0	1/1:15,0:14:33.11:459,33,0	1/1:9,0:9:18.06:265,18,0	1/1:11,0:10:18.05:268,18,0	1/1:15,0:15:30.09:388,30,0	0/0:12,0:12:27.09:0,27,350	1/1:10,0:10:15.05:210,15,0	1/1:22,0:22:46.36:612,46,0	1/1:8,0:8:14.54:185,15,0	1/1:12,0:11:15.04:197,15,0	1/1:22,0:22:54.07:748,54,0	1/1:4,0:4:6.02:85,6,0	1/1:15,0:15:27.09:363,27,0	1/1:20,0:20:42.14:565,42,0	1/1:11,0:11:11.89:162,12,0	1/1:17,0:16:19.21:314,19,0	1/1:15,0:15:35.94:494,36,0	1/1:16,0:16:6.93:74,7,0	1/1:6,0:6:15.04:203,15,0
chr10	26615910	.	T	TC	3406.70	PASS	AB=0.900;AC=42;AF=0.750;AN=56;BaseQRankSum=10.582;DP=389;FS=47.859;HRun=1;HaplotypeScore=127.6025;InbreedingCoeff=0.1146;MQ=66.34;MQ0=8;MQRankSum=-6.123;QD=11.32;ReadPosRankSum=8.177;VQSLOD=-0.7301;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:21,2:23:30.37:191,0,30	0/1:2,0:2:11.85:22,0,12	0/0:30,0:15:19.84:0,20,414	0/0:47,0:18:35.30:0,35,487	1/1:19,3:22:26.57:279,27,0	1/1:8,3:10:7.67:105,8,0	1/1:9,2:10:2.56:56,3,0	1/1:13,0:13:7.76:176,8,0	1/1:9,0:9:11.42:197,11,0	1/1:10,1:11:1.94:188,2,0	1/1:12,2:14:19.20:197,19,0	1/1:6,2:8:17.61:141,18,0	0/1:4,4:8:14.03:111,0,14	1/1:9,4:13:15.63:128,16,0	0/0:11,0:11:33.11:0,33,458	0/1:8,2:10:7.83:69,0,8	1/1:15,3:18:4.03:255,4,0	0/1:7,0:7:17.51:81,0,18	0/1:11,0:11:48.70:60,0,49	1/1:19,3:22:13.08:302,13,0	1/1:4,0:4:3.01:30,3,0	1/1:12,2:14:13.19:135,13,0	1/1:13,5:18:13.97:186,14,0	1/1:5,3:8:11.20:56,11,0	0/1:13,2:14:10.48:118,0,10	1/1:13,1:14:8.14:219,8,0	0/1:8,1:9:33.55:34,0,38	1/1:5,1:6:1.60:71,2,0
chr10	26615911	.	T	TC	3057.92	PASS	AB=0.893;AC=43;AF=0.768;AN=56;BaseQRankSum=8.498;DP=387;FS=35.338;HRun=1;HaplotypeScore=126.2461;InbreedingCoeff=0.3157;MQ=66.62;MQ0=8;MQRankSum=-5.649;QD=10.23;ReadPosRankSum=5.757;VQSLOD=-0.3796;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:21,2:23:11.29:202,0,11	1/1:2,0:2:5.94:43,6,0	0/0:30,0:15:34.89:0,35,441	0/0:47,0:18:35.81:0,36,439	1/1:19,3:22:24.36:226,24,0	1/1:8,3:10:11.28:110,11,0	1/1:9,2:10:13.27:76,13,0	1/1:15,0:15:13.52:172,14,0	1/1:9,0:9:12.76:175,13,0	0/1:8,1:9:8.38:102,0,8	1/1:12,2:14:32.30:204,32,0	1/1:6,2:8:20.18:148,20,0	0/1:4,4:8:8.86:94,0,9	1/1:9,4:13:25.03:115,25,0	0/0:11,0:11:33.11:0,33,428	1/1:8,2:10:19.44:126,19,0	1/1:15,3:18:30.17:233,30,0	0/1:6,0:6:14.12:69,0,14	0/1:11,0:11:35.65:52,0,36	1/1:20,3:23:19.05:284,19,0	1/1:4,0:4:5.97:47,6,0	1/1:12,2:14:12.53:111,13,0	1/1:13,5:18:17.09:173,17,0	1/1:5,3:8:16.34:84,16,0	0/1:12,2:13:2.03:133,0,2	1/1:13,1:14:8.88:187,9,0	0/1:7,1:8:2.04:2,0,37	1/1:5,1:6:1.49:58,1,0
chr10	26616982	.	C	CAAA	13750.04	PASS	AB=1.000;AC=53;AF=0.946;AN=56;BaseQRankSum=-5.512;DP=449;FS=13.429;HRun=10;HaplotypeScore=84.2144;InbreedingCoeff=0.4842;MQ=73.37;MQ0=1;MQRankSum=-3.946;QD=31.46;ReadPosRankSum=2.725;VQSLOD=2.5409;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,7:18:21.39:525,21,0	1/1:1,9:10:27.09:508,27,0	0/1:17,0:13:7.23:7,0,136	0/0:11,0:12:1.48:0,1,68	1/1:7,22:32:72.06:1131,72,0	1/1:2,14:18:45.11:776,45,0	1/1:1,6:8:18.06:346,18,0	1/1:4,1:28:74.71:603,75,0	1/1:5,10:19:33.07:547,33,0	1/1:3,7:11:27.06:430,27,0	1/1:5,12:18:42.14:736,42,0	1/1:5,9:16:24.06:408,24,0	1/1:2,10:13:21.05:368,21,0	1/1:3,10:14:15.05:266,15,0	1/1:3,0:16:14.95:35,15,0	1/1:2,6:10:21.05:354,21,0	1/1:2,0:12:26.91:208,27,0	1/1:3,12:16:33.11:634,33,0	1/1:6,9:17:33.07:551,33,0	1/1:6,13:24:54.14:914,54,0	1/1:4,6:12:17.07:240,17,0	1/1:1,8:11:30.04:504,30,0	1/1:2,17:22:48.02:869,48,0	1/1:3,5:8:15.05:288,15,0	1/1:2,8:11:24.08:409,24,0	1/1:0,16:17:48.12:818,48,0	1/1:6,15:23:33.10:620,33,0	1/1:2,9:15:39.09:654,39,0
chr10	26617087	.	G	GA	14204.09	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-10.549;DP=499;FS=2.482;HRun=6;HaplotypeScore=47.5065;InbreedingCoeff=0.9895;MQ=64.12;MQ0=1;MQRankSum=-2.611;QD=32.50;ReadPosRankSum=4.667;VQSLOD=4.8304;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,24:26:69.18:850,69,0	1/1:0,10:10:30.10:377,30,0	0/0:13,0:12:32.54:0,33,300	0/0:10,0:10:24.04:0,24,238	1/1:1,34:35:93.25:1150,93,0	1/1:2,13:15:42.13:523,42,0	1/1:2,7:9:21.02:246,21,0	0/0:24,0:25:71.17:0,71,700	1/1:4,13:17:42.13:527,42,0	1/1:3,20:23:60.19:755,60,0	1/1:5,12:17:33.06:397,33,0	1/1:0,11:11:33.11:415,33,0	1/1:2,15:17:48.15:602,48,0	1/1:1,11:12:24.08:302,24,0	1/1:1,16:17:39.12:491,39,0	1/1:0,8:8:21.07:264,21,0	0/0:14,0:14:36.08:0,36,366	1/1:1,20:21:51.16:641,51,0	1/1:0,14:14:42.13:527,42,0	1/1:3,35:38:99:1231,102,0	1/1:1,5:6:15.05:189,15,0	1/1:3,15:18:45.14:566,45,0	1/1:2,23:25:66.21:830,66,0	1/1:1,7:8:18.06:226,18,0	1/1:1,17:18:51.16:642,51,0	1/1:1,24:25:69.22:868,69,0	1/1:3,33:36:93.30:1170,93,0	1/1:0,11:11:33.11:415,33,0
chr10	26617168	.	A	AC	2323.15	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.090;DP=513;FS=23.483;HRun=1;HaplotypeScore=61.7561;InbreedingCoeff=0.9838;MQ=58.84;MQ0=1;MQRankSum=0.761;QD=41.48;ReadPosRankSum=-2.583;VQSLOD=1.1395;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:90.27:0,90,1151	0/0:5,0:5:15.04:0,15,184	0/0:12,0:9:27.09:0,27,342	0/0:16,0:14:35.94:0,36,427	0/0:31,0:31:90.28:0,90,1154	0/0:18,0:18:54.16:0,54,687	0/0:8,0:8:21.07:0,21,273	1/1:2,31:33:96.31:1412,96,0	0/0:21,0:21:63.20:0,63,818	0/0:21,0:21:63.20:0,63,818	0/0:24,0:24:72.23:0,72,935	0/0:14,0:14:42.14:0,42,545	0/0:22,0:22:66.21:0,66,857	0/0:16,0:16:48.16:0,48,623	0/0:16,0:16:38.93:0,39,506	0/0:12,0:12:33.11:0,33,428	1/1:0,23:23:69.23:1033,69,0	0/0:16,0:16:42.14:0,42,544	0/0:20,0:20:60.20:0,60,779	0/0:25,0:25:75.23:0,75,959	0/0:12,0:12:33.11:0,33,428	0/0:6,0:6:18.05:0,18,222	0/0:18,0:18:51.17:0,51,660	0/0:10,0:10:24.08:0,24,312	0/0:14,0:13:42.14:0,42,545	0/0:31,0:31:87.27:0,87,1117	0/0:22,0:22:63.19:0,63,804	0/0:14,0:14:42.14:0,42,545
chr10	26618252	.	G	GTTGAA	2307.88	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=2.608;DP=606;FS=0.000;HRun=0;HaplotypeScore=113.0573;InbreedingCoeff=0.7592;MQ=70.18;MQ0=0;MQRankSum=-7.448;QD=49.10;ReadPosRankSum=-4.570;VQSLOD=2.3867;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:75.22:0,75,1564	0/0:4,0:4:12.04:0,12,261	0/0:19,0:18:48.10:0,48,986	0/0:20,0:19:54.14:0,54,1117	0/0:38,0:38:99:0,105,2237	0/0:20,0:20:54.19:0,54,1173	0/0:17,0:17:45.15:0,45,977	1/1:10,14:28:81.23:2057,81,0	0/0:18,0:18:51.17:0,51,1088	0/0:38,0:38:99:0,111,2361	0/0:34,0:34:99:0,102,2135	0/0:13,0:13:36.12:0,36,781	0/0:19,0:19:57.17:0,57,1195	0/0:19,0:19:51.16:0,51,1067	0/0:21,0:21:60.21:0,60,1283	0/0:19,0:19:48.16:0,48,1042	1/1:2,2:4:12.04:360,12,0	0/1:15,0:15:15.54:16,0,821	0/0:18,0:18:47.65:0,48,970	0/0:28,0:29:81.26:0,81,1668	0/0:16,0:16:42.12:0,42,870	0/0:18,0:18:54.16:0,54,1129	0/0:21,0:21:57.18:0,57,1195	0/0:18,0:18:54.18:0,54,1117	0/0:27,0:27:75.26:0,75,1614	0/0:31,0:31:93.32:0,93,2008	0/0:44,0:42:99:0,129,2777	0/0:11,0:11:33.08:0,33,592
chr10	26618678	.	GA	G	470.50	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.616;DP=363;FS=18.299;HRun=9;HaplotypeScore=39.1833;InbreedingCoeff=0.8821;MQ=59.29;MQ0=9;MQRankSum=-3.573;QD=12.72;ReadPosRankSum=-0.665;VQSLOD=1.1180;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:19:36.11:0,36,415	0/0:8,0:8:24.07:0,24,277	0/0:14,0:6:18.05:0,18,197	0/0:9,0:4:8.91:0,9,72	0/0:20,0:20:57.13:0,57,643	0/0:14,0:14:36.09:0,36,405	0/0:14,0:14:39.10:0,39,441	1/1:6,19:21:26.53:317,27,0	0/0:9,0:9:24.07:0,24,276	0/0:18,0:18:45.10:0,45,500	0/0:16,0:16:41.79:0,42,458	0/0:17,0:17:42.11:0,42,475	0/0:8,0:8:24.06:0,24,267	0/0:12,0:12:36.11:0,36,415	0/0:2,0:12:25.73:0,26,143	0/0:7,0:7:21.06:0,21,242	1/1:1,11:12:29.98:274,30,0	0/0:7,0:7:15.04:0,15,173	0/0:17,0:16:48.14:0,48,546	0/0:17,0:17:48.10:0,48,525	0/0:9,0:9:21.06:0,21,242	0/0:4,0:4:12.03:0,12,138	0/0:10,0:10:27.08:0,27,312	0/0:5,0:5:15.04:0,15,173	0/0:11,0:11:33.09:0,33,373	0/0:23,0:23:63.17:0,63,704	0/0:23,0:22:60.17:0,60,684	0/0:2,0:2:6.02:0,6,69
chr10	26620013	.	CA	C	1737.12	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=4.819;DP=527;FS=0.545;HRun=3;HaplotypeScore=55.1810;InbreedingCoeff=0.9973;MQ=71.38;MQ0=0;MQRankSum=1.335;QD=34.06;ReadPosRankSum=-1.560;VQSLOD=3.2777;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:62.88:0,63,860	0/0:8,0:8:24.08:0,24,345	0/0:19,0:19:51.16:0,51,709	0/0:16,0:16:45.14:0,45,630	0/0:34,0:34:93.26:0,93,1272	0/0:22,0:20:66.21:0,66,931	0/0:14,0:14:42.13:0,42,586	1/1:0,31:31:93.29:1152,93,0	0/0:17,0:17:51.17:0,51,733	0/0:35,0:35:99:0,99,1425	0/0:25,0:25:75.19:0,75,1021	0/0:11,0:11:27.08:0,27,371	0/0:13,0:13:39.13:0,39,559	0/0:13,0:13:36.12:0,36,518	0/0:18,0:18:51.17:0,51,733	0/0:14,0:14:42.14:0,42,604	1/1:0,20:20:57.18:706,57,0	0/0:13,0:13:33.11:0,33,474	0/0:9,0:9:27.08:0,27,374	0/0:32,0:32:93.27:0,93,1293	0/0:15,0:15:45.15:0,45,648	0/0:17,0:17:48.12:0,48,667	0/0:18,0:18:51.12:0,51,694	0/0:11,0:11:30.10:0,30,431	0/0:22,0:22:63.21:0,63,905	0/0:17,0:17:45.15:0,45,646	0/0:26,0:26:75.24:0,75,1062	0/0:16,0:16:48.16:0,48,691
chr10	26621785	.	GTCCACC	G	7965.12	PASS	AB=0.664;AC=42;AF=0.778;AN=54;BaseQRankSum=13.167;DP=312;FS=6.413;HRun=0;HaplotypeScore=235.3706;InbreedingCoeff=0.7141;MQ=49.95;MQ0=0;MQRankSum=-10.384;QD=45.26;ReadPosRankSum=9.411;VQSLOD=3.3258;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:1,8:9:20.18:378,20,0	1/1:0,5:5:15.05:272,15,0	0/0:39,0:28:77.39:0,77,2628	0/0:31,0:26:78.24:0,78,2632	1/1:0,12:14:33.45:559,33,0	1/1:1,8:9:27.04:464,27,0	1/1:2,3:5:8.99:133,9,0	0/0:27,0:27:81.23:0,81,2459	1/1:1,14:15:45.03:750,45,0	1/1:1,6:7:15.05:281,15,0	1/1:0,7:7:21.07:377,21,0	1/1:0,10:10:30.10:548,30,0	1/1:1,14:15:45.10:793,45,0	1/1:3,11:14:42.10:685,42,0	0/0:26,0:26:75.24:0,75,2727	1/1:1,5:6:18.05:303,18,0	0/0:12,0:12:36.11:0,36,1178	0/1:5,3:8:99:189,0,152	1/1:0,5:5:15.03:222,15,0	1/1:0,7:7:12.04:217,12,0	1/1:1,0:1:2.96:19,3,0	1/1:2,5:7:16.59:244,17,0	1/1:1,6:7:18.49:292,18,0	./.	1/1:0,3:3:9.03:165,9,0	1/1:0,7:7:18.05:311,18,0	1/1:0,12:12:36.12:663,36,0	0/1:1,2:3:65.60:101,0,66
chr10	26621792	.	GCCAGTAGATAGATAGGGCCTCAAGTGA	G	28909.32	PASS	AB=0.613;AC=42;AF=0.778;AN=54;BaseQRankSum=14.141;DP=283;FS=4.059;HRun=0;HaplotypeScore=290.0221;InbreedingCoeff=0.7122;MQ=57.34;MQ0=0;MQRankSum=-12.300;QD=186.51;ReadPosRankSum=11.138;VQSLOD=3.3759;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,8:8:24.08:1547,24,0	1/1:0,5:5:15.05:1006,15,0	0/0:30,0:25:75.26:0,75,4796	0/0:29,0:27:81.28:0,81,6105	1/1:2,12:14:36.12:2310,36,0	1/1:0,8:8:24.08:1619,24,0	1/1:0,3:3:9.03:573,9,0	0/0:28,0:28:84.25:0,84,5594	1/1:0,14:14:42.14:2786,42,0	1/1:0,6:6:15.05:1015,15,0	1/1:0,7:7:21.07:1403,21,0	1/1:0,10:10:30.10:2015,30,0	1/1:0,14:14:42.14:2828,42,0	1/1:0,11:11:33.11:2223,33,0	0/0:29,0:29:84.26:0,84,8574	1/1:0,5:5:15.05:1011,15,0	0/0:12,0:12:36.12:0,36,3219	0/1:2,3:5:99:591,0,115	1/1:0,3:3:9.03:608,9,0	1/1:2,4:6:12.04:804,12,0	./.	1/1:0,5:5:15.05:951,15,0	1/1:0,6:6:18.06:1147,18,0	1/1:0,1:1:2.88:15,3,0	1/1:0,3:3:9.03:605,9,0	1/1:1,5:6:18.03:1039,18,0	1/1:0,12:12:36.12:2422,36,0	0/1:1,2:3:10.91:394,0,11
chr10	26622325	.	T	TGGCCAGGG	41114.20	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-5.977;DP=448;FS=3.793;HRun=0;HaplotypeScore=99.7941;InbreedingCoeff=0.9111;MQ=71.18;MQ0=0;MQRankSum=-10.486;QD=102.79;ReadPosRankSum=3.686;VQSLOD=5.6734;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,10:18:45.11:1761,45,0	1/1:3,6:10:30.10:1250,30,0	0/0:24,0:24:66.21:0,66,1831	0/0:23,0:23:59.37:0,59,1686	1/1:3,13:17:36.12:1545,36,0	1/1:4,18:24:60.21:2568,60,0	1/1:4,8:13:36.12:1527,36,0	1/1:14,6:28:84.26:2759,84,0	1/1:4,11:16:45.15:1899,45,0	1/1:5,10:16:45.15:1840,45,0	1/1:2,7:9:24.08:986,24,0	1/1:2,9:11:33.11:1365,33,0	1/1:3,10:15:39.13:1694,39,0	1/1:1,8:9:27.09:1194,27,0	1/1:2,6:8:24.08:1064,24,0	1/1:2,6:8:24.08:913,24,0	1/1:5,13:20:42.14:1720,42,0	1/1:2,9:14:27.09:1221,27,0	1/1:9,6:18:54.15:1840,54,0	1/1:4,11:15:36.12:1624,36,0	1/1:8,8:22:30.10:1215,30,0	1/1:1,21:21:57.20:2476,57,0	1/1:1,11:14:36.12:1459,36,0	1/1:2,11:14:23.66:984,24,0	1/1:4,10:16:39.13:1661,39,0	1/1:6,13:20:60.19:2250,60,0	1/1:3,12:17:48.64:2163,49,0	1/1:0,1:1:3.01:136,3,0
chr10	26622589	.	CT	C	1272.89	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=10.055;DP=355;FS=15.383;HRun=1;HaplotypeScore=38.0208;InbreedingCoeff=0.8524;MQ=82.60;MQ0=0;MQRankSum=-0.280;QD=28.29;ReadPosRankSum=-3.776;VQSLOD=1.2613;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,111,1758	0/0:3,0:3:9.03:0,9,144	0/0:11,0:11:30.08:0,30,436	0/0:11,0:11:3:0,3,306	0/0:11,0:11:33.11:0,33,523	0/0:11,0:11:30.10:0,30,468	0/0:11,0:11:33.09:0,33,480	1/1:7,23:30:87.11:941,87,0	0/0:21,0:21:63.18:0,63,959	0/0:7,0:7:21.07:0,21,316	0/0:9,0:9:27.08:0,27,408	0/0:10,0:10:30.10:0,30,479	0/0:8,0:8:24.08:0,24,383	0/0:11,0:11:33.11:0,33,527	0/0:13,0:13:39.10:0,39,576	0/0:10,0:10:30.09:0,30,455	1/1:0,15:15:39.12:453,39,0	0/0:13,0:13:39.05:0,39,541	0/0:20,0:20:60.14:0,60,860	0/0:5,0:5:15.04:0,15,216	0/0:10,0:10:30.09:0,30,456	0/0:8,0:8:24.06:0,24,359	0/0:7,0:7:21.07:0,21,335	0/0:14,0:14:42.13:0,42,647	0/0:7,0:7:21.04:0,21,288	0/0:18,0:18:54.18:0,54,862	0/0:18,0:18:54.18:0,54,860	0/0:3,0:3:9.03:0,9,143
chr10	26623492	.	T	TC	13178.80	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-10.965;DP=561;FS=0.414;HRun=6;HaplotypeScore=54.8655;InbreedingCoeff=0.9633;MQ=68.57;MQ0=0;MQRankSum=-3.366;QD=30.02;ReadPosRankSum=4.783;VQSLOD=5.0802;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,38:41:99:1281,102,0	1/1:1,8:9:23.99:281,24,0	0/0:27,0:25:35.76:0,36,432	0/0:20,0:21:10.85:0,11,421	1/1:1,20:21:51.12:623,51,0	1/1:1,13:14:27.09:340,27,0	1/1:1,18:19:54.17:677,54,0	0/0:32,0:32:76.05:0,76,767	1/1:0,22:22:54.17:679,54,0	1/1:1,16:17:42.13:528,42,0	1/1:0,7:7:18.06:220,18,0	1/1:3,14:17:39.12:490,39,0	1/1:2,14:16:36.12:453,36,0	1/1:0,22:22:66.21:830,66,0	0/0:17,0:17:51.10:0,51,514	1/1:0,19:19:54.17:679,54,0	0/0:25,0:25:72.16:0,72,734	1/1:2,7:9:6.15:212,6,0	1/1:3,15:18:40.34:477,40,0	1/1:0,22:22:51.12:623,51,0	1/1:3,24:27:51.16:642,51,0	1/1:1,13:14:36.12:453,36,0	1/1:1,14:15:20.89:264,21,0	1/1:1,23:24:60.19:755,60,0	1/1:0,13:13:30.10:377,30,0	1/1:3,22:25:66.15:786,66,0	1/1:3,33:35:93.17:1170,93,0	1/1:0,12:12:27.09:340,27,0
chr10	26624280	.	CT	C	7552.56	PASS	AB=0.833;AC=53;AF=0.946;AN=56;BaseQRankSum=-4.135;DP=460;FS=0.000;HRun=11;HaplotypeScore=58.1301;InbreedingCoeff=0.4974;MQ=75.24;MQ0=0;MQRankSum=-2.714;QD=17.09;ReadPosRankSum=2.056;VQSLOD=5.7589;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,10:10:23.97:197,24,0	1/1:0,8:8:23.97:197,24,0	0/0:18,0:13:6.42:0,6,91	0/1:8,2:10:28.52:29,0,33	1/1:8,18:26:52.93:424,53,0	1/1:3,12:16:31.97:252,32,0	1/1:1,10:12:29.01:228,29,0	1/1:6,0:39:62.15:180,62,0	1/1:4,14:18:35.94:296,36,0	1/1:4,22:26:65.82:530,66,0	1/1:0,24:24:71.85:584,72,0	1/1:0,14:14:41.95:344,42,0	1/1:1,10:11:20.97:172,21,0	1/1:1,8:9:23.97:197,24,0	1/1:0,0:6:12.22:35,12,0	1/1:1,12:13:26.97:222,27,0	1/1:1,0:9:12.22:36,12,0	1/1:2,6:8:17.96:148,18,0	1/1:5,26:31:77.85:634,78,0	1/1:4,28:34:87.97:701,88,0	1/1:1,8:9:17.98:148,18,0	1/1:5,13:18:35.93:295,36,0	1/1:1,10:11:26.97:222,27,0	1/1:0,3:3:8.99:74,9,0	1/1:3,17:21:46.95:375,47,0	1/1:6,15:21:44.91:369,45,0	1/1:2,23:25:59.82:492,60,0	1/1:3,7:10:20.97:172,21,0
chr10	26624391	.	A	AT	692.88	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-5.989;DP=377;FS=11.968;HRun=8;HaplotypeScore=40.7266;InbreedingCoeff=0.8805;MQ=89.28;MQ0=0;MQRankSum=0.299;QD=19.80;ReadPosRankSum=-2.865;VQSLOD=1.5128;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:6:18.01:0,18,165	0/0:9,0:9:24.01:0,24,220	0/0:16,0:16:23.79:0,24,196	0/0:15,1:16:11.98:0,12,104	0/0:26,0:26:65.99:0,66,596	0/0:18,0:18:45.01:0,45,408	0/0:8,0:8:23.96:0,24,207	1/1:11,17:28:51.15:589,51,0	0/0:18,0:18:51.02:0,51,466	0/0:16,0:16:42.02:0,42,384	0/0:17,0:17:45.02:0,45,411	0/0:12,0:12:36.01:0,36,325	0/0:13,0:13:35.99:0,36,320	0/0:8,0:8:21.01:0,21,192	0/0:9,0:9:18.01:0,18,165	0/0:11,0:11:24.01:0,24,220	1/1:0,7:7:20.98:225,21,0	0/0:7,0:7:18.01:0,18,165	0/0:22,0:22:56.99:0,57,509	0/0:21,0:21:54.01:0,54,489	0/0:5,0:5:15.01:0,15,137	0/0:6,0:6:15.01:0,15,137	0/0:14,0:14:29.99:0,30,270	0/0:3,0:3:9:0,9,82	0/0:15,0:15:39.01:0,39,357	0/0:14,0:14:7.57:0,8,249	0/0:26,0:25:68.99:0,69,618	0/0:5,0:6:15.01:0,15,138
chr10	26628688	.	TAC	T	1377.56	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=10.100;DP=786;FS=2.847;HRun=0;HaplotypeScore=95.6051;InbreedingCoeff=0.9052;MQ=60.11;MQ0=2;MQRankSum=2.771;QD=25.51;ReadPosRankSum=-3.378;VQSLOD=3.4081;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:60.62:0,61,980	0/0:11,0:11:27.09:0,27,467	0/0:27,0:14:32.61:0,33,481	0/0:30,0:16:37.37:0,37,484	0/0:32,0:32:96.30:0,96,1586	0/0:36,0:36:93.30:0,93,1568	0/0:18,0:18:48.15:0,48,798	1/1:9,29:38:87.20:1100,87,0	0/0:18,0:18:54.18:0,54,913	0/0:43,0:43:99:0,114,1953	0/0:26,0:26:66.21:0,66,1101	0/0:34,0:34:93.27:0,93,1509	0/0:38,0:38:99:0,99,1619	0/0:24,0:24:72.25:0,72,1240	0/0:29,0:29:84.25:0,84,1370	0/0:37,0:37:99:0,105,1715	1/1:0,16:16:30.10:399,30,0	0/0:8,0:8:2.16:0,2,293	0/0:19,0:19:45.15:0,45,733	0/0:41,0:41:99:0,117,1979	0/0:25,0:25:72.22:0,72,1206	0/0:38,0:38:99:0,102,1731	0/0:35,0:35:99:0,102,1709	0/0:13,0:13:39.13:0,39,670	0/0:28,0:28:84.27:0,84,1420	0/0:25,0:25:72.24:0,72,1212	0/0:55,0:55:99:0,147,2442	0/0:12,0:12:30.08:0,30,490
chr10	26629115	.	TAG	T	2107.18	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.987;DP=482;FS=0.000;HRun=0;HaplotypeScore=57.4311;InbreedingCoeff=0.9526;MQ=74.46;MQ0=0;MQRankSum=0.580;QD=34.54;ReadPosRankSum=-3.992;VQSLOD=4.0993;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:60.21:0,60,1105	0/0:5,0:5:15.05:0,15,274	0/0:15,0:15:41.54:0,42,623	0/0:11,0:10:23.65:0,24,346	0/0:30,0:30:90.31:0,90,1654	0/0:18,0:18:51.17:0,51,938	0/0:19,0:19:57.20:0,57,1059	1/1:3,35:38:99:1478,105,0	0/0:11,0:11:33.11:0,33,618	0/0:28,0:28:84.28:0,84,1515	0/0:22,0:22:63.19:0,63,1097	0/0:8,0:8:24.08:0,24,449	0/0:14,0:14:42.14:0,42,779	0/0:10,0:10:27.09:0,27,506	0/0:15,0:15:45.13:0,45,773	0/0:16,0:15:48.16:0,48,876	1/1:1,22:23:51.17:751,51,0	0/0:6,0:6:18.06:0,18,337	0/0:24,0:24:69.23:0,69,1243	0/0:25,0:25:72.25:0,72,1332	0/0:3,0:3:9.03:0,9,169	0/0:13,0:13:39.13:0,39,722	0/0:14,0:14:42.14:0,42,768	0/0:12,0:12:36.12:0,36,674	0/0:26,0:26:78.26:0,78,1418	0/0:23,0:23:66.21:0,66,1197	0/0:26,0:26:75.24:0,75,1352	0/0:6,0:6:18.02:0,18,270
chr10	26629641	.	C	CGT	7694.08	PASS	AB=0.701;AC=38;AF=0.679;AN=56;BaseQRankSum=-6.642;DP=725;FS=1.343;HRun=0;HaplotypeScore=97.3195;InbreedingCoeff=-0.3488;MQ=65.32;MQ0=3;MQRankSum=2.361;QD=11.02;ReadPosRankSum=3.019;VQSLOD=4.8020;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:18,17:36:31.10:425,0,31	1/1:7,2:9:2.05:146,2,0	0/0:27,0:15:5.98:0,6,55	0/1:32,0:26:6.72:7,0,57	0/1:14,8:22:18.94:154,0,19	0/1:14,11:25:89.07:203,0,89	1/1:15,13:28:5.73:390,6,0	1/1:24,0:24:11.18:72,11,0	0/1:12,7:19:18.94:169,0,19	1/1:17,21:40:18.40:820,18,0	1/1:6,14:21:30.08:441,30,0	0/1:15,10:26:46.93:209,0,47	0/1:14,11:25:44.03:252,0,44	1/1:18,11:29:24.08:366,24,0	1/1:20,0:32:17.53:153,18,0	0/1:11,13:25:38.15:338,0,38	1/1:20,0:20:6.47:53,6,0	1/1:1,5:6:9.03:138,9,0	0/1:15,9:23:31.87:273,0,32	0/1:12,14:26:13.14:255,0,13	0/1:32,20:53:99:368,0,134	0/1:9,9:17:13.24:255,0,13	0/1:15,13:28:92.56:287,0,93	0/1:13,20:33:20.17:564,0,20	0/1:10,13:23:40.99:295,0,41	1/1:19,14:33:42.11:587,42,0	0/1:15,14:29:6.97:334,0,7	1/1:4,5:9:9.03:138,9,0
chr10	26630007	.	C	CAGAG	818.54	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.714;DP=609;FS=46.992;HRun=0;HaplotypeScore=126.1763;InbreedingCoeff=0.8267;MQ=67.08;MQ0=16;MQRankSum=-3.184;QD=37.21;ReadPosRankSum=-4.057;VQSLOD=0.8114;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:27:50.69:0,51,757	0/0:9,0:9:21.05:0,21,305	0/0:48,0:22:11.60:0,12,82	0/0:63,0:16:8.91:0,9,153	0/0:21,0:21:51.03:0,51,753	0/0:22,0:22:46.14:0,46,817	0/0:9,0:9:24.07:0,24,357	0/0:17,0:17:33.07:0,33,451	0/0:17,0:17:41.90:0,42,585	0/0:26,0:26:41.29:0,41,635	0/0:28,0:29:54.20:0,54,1023	0/0:9,0:8:21.05:0,21,330	0/0:18,0:18:45.13:0,45,694	0/0:16,0:16:37.66:0,38,561	1/1:16,6:22:42.07:913,42,0	0/0:11,0:12:24.04:0,24,411	0/0:21,0:21:48.53:0,49,749	0/0:9,0:9:11.57:0,12,261	0/0:21,0:21:13:0,13,469	0/0:24,0:23:48.08:0,48,703	0/0:21,0:21:45.07:0,45,645	0/0:22,0:21:48.04:0,48,694	0/0:29,0:29:59.89:0,60,859	0/0:19,0:19:39.11:0,39,602	0/0:17,0:17:16.29:0,16,266	0/0:33,0:32:53.69:0,54,922	0/0:22,0:22:47.15:0,47,762	0/0:5,0:5:12.04:0,12,204
chr10	26630037	.	GA	G	362.70	PASS	AB=0.895;AC=5;AF=0.089;AN=56;BaseQRankSum=7.482;DP=628;FS=2.127;HRun=2;HaplotypeScore=108.1777;InbreedingCoeff=0.1753;MQ=48.89;MQ0=25;MQRankSum=-5.372;QD=4.27;ReadPosRankSum=-1.413;VQSLOD=0.0733;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:44.12:0,44,550	0/0:9,1:9:19.70:0,20,172	0/0:47,0:7:3.28:0,3,112	0/0:66,1:8:14.98:0,15,175	0/0:22,1:22:39.39:0,39,497	0/0:24,2:27:36.43:0,36,622	0/0:10,0:9:18.06:0,18,240	0/1:23,3:26:58.48:58,0,726	0/0:16,0:15:37.98:0,38,406	0/0:16,3:19:25.54:0,26,355	0/0:22,0:22:58.82:0,59,695	0/0:12,1:12:16.46:0,16,150	0/0:14,1:15:29.56:0,30,379	0/0:15,0:14:31.10:0,31,336	1/1:12,10:21:3.60:259,4,0	0/0:16,0:16:41.93:0,42,348	0/1:19,7:25:99:142,0,561	0/1:11,0:11:14.03:14,0,129	0/0:20,0:18:50.15:0,50,558	0/0:25,0:24:45.88:0,46,534	0/0:22,0:22:3.19:0,3,328	0/0:22,0:20:26.68:0,27,404	0/0:25,1:26:58.04:0,58,601	0/0:21,1:22:26.21:0,26,264	0/0:20,1:22:37.66:0,38,289	0/0:27,1:26:49.44:0,49,558	0/0:25,1:25:62.43:0,62,665	0/0:6,0:6:12.04:0,12,160
chr10	26630038	.	AAG	A	2937.40	PASS	AB=0.840;AC=40;AF=0.833;AN=48;BaseQRankSum=-1.714;DP=635;FS=21.467;HRun=0;HaplotypeScore=109.2799;InbreedingCoeff=0.2840;MQ=48.62;MQ0=24;MQRankSum=4.174;QD=6.54;ReadPosRankSum=2.887;VQSLOD=1.5648;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:16,6:24:8.14:86,0,8	1/1:8,2:9:11.36:94,11,0	./.	./.	1/1:19,2:22:2.42:101,2,0	1/1:25,2:27:15.04:162,15,0	./.	0/0:30,0:30:17.05:0,17,124	1/1:14,0:15:5.48:24,5,0	1/1:14,5:19:32.40:309,32,0	0/1:18,4:22:13.29:101,0,13	1/1:8,4:11:9.02:94,9,0	1/1:15,0:15:20.86:193,21,0	0/1:11,4:14:7.66:86,0,8	1/1:22,0:21:8.23:37,8,0	1/1:11,3:16:23.37:176,23,0	0/0:26,0:26:18.92:0,19,126	1/1:6,4:11:11.87:127,12,0	1/1:21,0:20:11.86:105,12,0	0/1:21,1:23:29.65:114,0,30	1/1:14,7:22:8.85:79,9,0	1/1:13,8:20:17.97:169,18,0	1/1:19,6:27:19.69:176,20,0	1/1:12,9:22:20.87:195,21,0	1/1:11,9:22:23.69:216,24,0	1/1:25,2:27:1.04:254,1,0	1/1:21,6:26:18:180,18,0	./.
chr10	26630081	.	AGT	A	861.40	PASS	AB=0.941;AC=18;AF=0.321;AN=56;BaseQRankSum=9.624;DP=634;FS=5.830;HRun=0;HaplotypeScore=119.0599;InbreedingCoeff=-0.5095;MQ=55.54;MQ0=40;MQRankSum=1.631;QD=2.48;ReadPosRankSum=2.624;VQSLOD=2.0217;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:4.71:0,5,213	0/1:10,0:9:47.16:47,0,87	0/0:59,0:18:50.54:0,51,407	0/0:83,0:21:26.62:0,27,258	0/1:20,2:22:56.79:57,0,171	0/1:21,0:21:31.43:31,0,195	0/0:5,6:10:14.96:0,15,119	0/0:34,0:34:80.27:0,80,779	0/1:12,0:11:3.72:4,0,137	0/1:20,0:20:53.16:53,0,202	0/1:8,1:9:40.23:40,0,99	0/1:17,1:17:57.40:57,0,152	0/1:17,2:19:99:106,0,189	0/0:15,1:13:3.61:0,4,120	0/0:19,0:18:25.03:0,25,166	0/1:16,0:16:65.35:65,0,169	0/1:30,0:29:22.79:23,0,259	0/1:9,1:10:49.10:56,0,49	0/0:10,0:10:4:0,4,140	0/1:12,10:21:56.94:57,0,202	0/0:26,0:26:21.73:0,22,309	0/1:20,1:20:60.93:61,0,192	0/1:19,1:20:50.34:50,0,167	0/1:23,2:25:88.15:88,0,180	0/1:25,1:26:19.40:19,0,233	0/1:23,1:22:74.71:75,0,186	0/1:21,2:22:99:124,0,199	0/0:8,0:6:2.99:0,3,107
chr10	26630182	.	TC	T	1023.94	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.351;DP=578;FS=7.715;HRun=6;HaplotypeScore=56.8700;InbreedingCoeff=0.9938;MQ=83.05;MQ0=0;MQRankSum=-4.436;QD=23.81;ReadPosRankSum=-2.446;VQSLOD=2.0563;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:66.18:0,66,837	0/0:10,0:10:27.05:0,27,324	0/0:13,0:13:32.14:0,32,342	0/0:21,0:21:47.94:0,48,580	0/0:27,0:27:75.24:0,75,986	0/0:29,0:29:78.23:0,78,996	0/0:13,0:12:36.10:0,36,458	1/1:2,26:28:78.17:823,78,0	0/0:21,0:21:60.12:0,60,727	0/0:25,0:25:72.22:0,72,917	0/0:28,0:28:84.27:0,84,1103	0/0:15,0:15:42.12:0,42,526	0/0:19,0:19:54.18:0,54,710	0/0:19,0:18:45.14:0,45,585	0/0:28,0:28:78.22:0,78,995	0/0:16,0:16:45.15:0,45,592	1/1:2,13:15:30.07:322,30,0	0/0:8,0:8:24.04:0,24,297	0/0:18,0:18:48.15:0,48,617	0/0:26,0:26:75.23:0,75,969	0/0:31,0:31:84.20:0,84,1054	0/0:22,0:22:63.19:0,63,815	0/0:23,0:23:69.20:0,69,869	0/0:23,0:23:51.15:0,51,656	0/0:20,0:20:54.18:0,54,710	0/0:23,0:22:63.07:0,63,829	0/0:23,0:23:60.20:0,60,789	0/0:8,0:8:18.06:0,18,235
chr10	26633350	.	GA	G	292.25	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.181;DP=492;FS=0.000;HRun=6;HaplotypeScore=44.3219;InbreedingCoeff=0.9290;MQ=77.54;MQ0=0;MQRankSum=-2.996;QD=19.48;ReadPosRankSum=-0.174;VQSLOD=2.6615;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:8:24.08:0,24,316	0/0:4,0:4:9.03:0,9,118	0/0:13,0:13:36.11:0,36,460	0/0:8,0:8:24.03:0,24,288	0/0:30,0:30:87.27:0,87,1119	0/0:18,0:18:54.18:0,54,710	0/0:15,0:15:39.13:0,39,513	0/0:24,0:24:66.20:0,66,845	0/0:12,0:12:36.10:0,36,459	0/0:16,0:16:42.14:0,42,553	0/0:22,0:22:60.18:0,60,775	0/0:18,0:18:54.18:0,54,711	0/0:25,0:25:63.20:0,63,827	0/0:18,0:18:51.17:0,51,671	1/1:3,12:15:36.09:387,36,0	0/0:22,0:22:63.19:0,63,814	0/0:11,0:11:27.05:0,27,335	0/0:13,0:13:33.11:0,33,434	0/0:21,0:21:63.20:0,63,829	0/0:31,0:31:81.26:0,81,1066	0/0:10,0:10:30.09:0,30,381	0/0:18,0:18:54.17:0,54,697	0/0:23,0:23:63.19:0,63,814	0/0:6,0:6:18.06:0,18,236	0/0:24,0:24:69.22:0,69,908	0/0:24,0:24:66.21:0,66,869	0/0:34,0:33:99:0,102,1342	0/0:9,0:9:21.07:0,21,276
chr10	26633590	.	GA	G	11086.27	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=6.091;DP=482;FS=5.336;HRun=8;HaplotypeScore=72.2313;InbreedingCoeff=0.9583;MQ=71.28;MQ0=0;MQRankSum=-2.131;QD=25.37;ReadPosRankSum=4.758;VQSLOD=5.5358;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,11:12:30.05:290,30,0	1/1:2,10:12:30.05:290,30,0	0/0:8,0:7:9.01:0,9,93	0/0:6,0:6:10.58:0,11,110	1/1:2,29:31:81.12:782,81,0	1/1:0,25:25:72.12:695,72,0	1/1:1,13:14:33.05:319,33,0	0/0:23,0:23:66.20:0,66,797	1/1:2,14:16:42.06:406,42,0	1/1:0,21:21:63.10:609,63,0	1/1:2,29:31:84.13:811,84,0	1/1:1,14:15:42.07:405,42,0	1/1:0,13:13:39.06:377,39,0	1/1:3,20:23:60.09:579,60,0	1/1:2,16:18:45.07:435,45,0	1/1:0,10:10:27.04:261,27,0	0/0:8,0:8:18.03:0,18,204	1/1:3,11:14:33.05:319,33,0	1/1:3,12:15:36.05:348,36,0	1/1:3,29:32:84.08:802,84,0	1/1:0,7:7:15.02:145,15,0	1/1:2,17:19:51.08:493,51,0	1/1:3,19:22:54.08:521,54,0	1/1:0,8:8:21.03:203,21,0	1/1:4,19:23:51.08:493,51,0	1/1:0,19:19:54.08:522,54,0	1/1:0,32:32:87.14:840,87,0	1/1:0,5:5:15.02:145,15,0
chr10	26635773	.	CACACACACAT	C	6961.11	PASS	AB=0.996;AC=40;AF=0.714;AN=56;BaseQRankSum=9.737;DP=491;FS=1.025;HRun=0;HaplotypeScore=173.1025;InbreedingCoeff=0.2928;MQ=47.47;MQ0=5;MQRankSum=-6.313;QD=16.61;ReadPosRankSum=7.753;VQSLOD=3.1213;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:27,1:28:59.60:290,0,60	1/1:8,0:8:9.01:104,9,0	0/0:16,0:5:15.02:0,15,253	0/0:11,0:6:18.03:0,18,288	1/1:32,1:33:37.01:525,37,0	1/1:21,1:22:27.08:407,27,0	1/1:13,0:13:7.47:60,7,0	0/0:29,0:29:87.24:0,87,2234	0/1:11,0:11:4.92:244,0,5	1/1:20,0:20:20.74:495,21,0	1/1:19,0:19:20.67:274,21,0	1/1:20,0:19:7.11:325,7,0	1/1:18,1:19:17.97:552,18,0	0/1:22,0:22:32.77:433,0,33	0/1:20,0:20:24.43:24,0,1275	1/1:12,0:12:20.82:280,21,0	0/0:16,0:15:31.72:0,32,464	0/1:14,0:14:2.08:65,0,2	1/1:16,0:16:41.99:432,42,0	1/1:14,2:16:30.94:477,31,0	0/1:10,0:10:14.93:35,0,15	1/1:5,0:5:9.03:112,9,0	1/1:18,0:18:11.41:178,11,0	0/1:9,0:8:16.96:34,0,17	0/1:12,0:12:39.59:149,0,40	1/1:23,0:23:22.14:635,22,0	1/1:25,1:26:15:630,15,0	1/1:23,0:21:15.05:201,15,0
chr10	26635775	.	CACACACAT	C	14992.76	PASS	AB=0.696;AC=43;AF=0.768;AN=56;BaseQRankSum=4.774;DP=489;FS=4.051;HRun=0;HaplotypeScore=129.9375;InbreedingCoeff=0.4586;MQ=49.23;MQ0=5;MQRankSum=-4.694;QD=36.04;ReadPosRankSum=6.844;VQSLOD=4.3347;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:23,4:27:11.42:528,0,11	1/1:0,8:8:9.03:243,9,0	0/0:15,0:5:11.89:0,12,164	0/0:12,0:7:14.20:0,14,214	1/1:3,30:33:39.27:1048,39,0	1/1:1,23:24:27.09:746,27,0	1/1:1,13:14:9.03:200,9,0	0/0:29,0:30:90.24:0,90,1647	1/1:1,9:10:20.55:594,21,0	1/1:1,18:19:51.12:1147,51,0	1/1:1,19:20:30.10:732,30,0	1/1:2,18:19:27.09:764,27,0	1/1:2,17:19:38.16:1095,38,0	0/1:1,20:21:28.39:1030,0,28	0/1:20,0:20:46.27:46,0,936	1/1:0,13:13:20.96:607,21,0	0/0:16,0:15:27.54:0,28,364	0/1:4,11:15:1.68:149,0,2	1/1:3,13:16:42.47:829,42,0	1/1:2,14:16:33.11:823,33,0	1/1:1,9:10:6.02:136,6,0	1/1:0,5:5:9.03:251,9,0	1/1:0,17:17:21.51:504,22,0	1/1:3,6:8:3.01:86,3,0	0/1:1,11:12:11.57:381,0,12	1/1:2,20:22:63.10:1286,63,0	1/1:2,22:24:47.96:1333,48,0	1/1:1,21:21:15.05:435,15,0
chr10	26638661	.	T	TAA	1130.89	PASS	AB=0.917;AC=5;AF=0.089;AN=56;BaseQRankSum=-3.096;DP=441;FS=3.238;HRun=10;HaplotypeScore=54.7119;InbreedingCoeff=0.7136;MQ=75.45;MQ0=0;MQRankSum=-0.847;QD=21.75;ReadPosRankSum=-5.150;VQSLOD=1.4779;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:24.05:0,24,244	0/0:2,0:2:6.01:0,6,61	0/0:12,0:12:17.58:0,18,158	0/1:10,0:10:13.46:13,0,68	0/0:21,0:22:56.85:0,57,561	0/0:21,0:21:51.09:0,51,519	0/0:5,0:5:9.02:0,9,92	1/1:6,18:26:59.63:798,60,0	0/0:20,0:20:48.07:0,48,488	0/0:20,0:20:55.08:0,55,571	0/0:20,0:21:59.84:0,60,583	0/0:13,0:14:29.79:0,30,356	0/0:18,0:18:48.10:0,48,488	0/0:24,0:25:50.80:0,51,563	0/0:15,0:15:39.03:0,39,381	0/0:12,0:13:32.80:0,33,317	1/1:4,11:15:30.10:447,30,0	0/0:17,0:17:32.34:0,32,324	0/0:22,0:23:44.77:0,45,505	0/0:9,0:12:29.28:0,29,249	0/0:18,0:18:32.99:0,33,335	0/0:7,0:7:15.02:0,15,153	0/0:10,0:10:24.05:0,24,244	0/0:7,0:7:21.05:0,21,214	0/0:16,0:17:41.82:0,42,409	0/0:27,0:28:68.85:0,69,677	0/0:26,0:26:65.81:0,66,639	0/0:5,0:5:12.03:0,12,122
chr10	26643620	.	T	TCTTCCTTC	12546.76	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-1.748;DP=708;FS=4.278;HRun=0;HaplotypeScore=158.9536;InbreedingCoeff=0.5376;MQ=52.82;MQ0=7;MQRankSum=1.275;QD=18.81;ReadPosRankSum=0.288;VQSLOD=4.3182;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:24:26.08:496,26,0	1/1:13,0:14:24.07:540,24,0	0/0:27,0:11:2.75:0,3,54	0/0:14,0:7:6.02:0,6,97	1/1:9,26:36:36.05:920,36,0	1/1:16,26:45:6.01:149,6,0	1/1:13,0:27:42.13:871,42,0	1/1:31,0:34:33.10:484,33,0	1/1:8,10:21:6.02:247,6,0	1/1:14,0:19:27.08:599,27,0	1/1:5,13:19:18.01:491,18,0	1/1:12,14:29:6.02:214,6,0	1/1:8,27:36:18.06:738,18,0	1/1:12,13:26:9.03:363,9,0	1/1:15,0:28:53.53:1098,54,0	1/1:9,20:32:9.92:372,10,0	1/1:7,14:23:13.20:384,13,0	1/1:17,0:19:12.22:218,12,0	1/1:17,0:16:8.99:97,9,0	1/1:5,18:26:23.97:427,24,0	1/1:14,0:16:9.01:118,9,0	1/1:14,20:34:11.75:340,12,0	1/1:18,0:22:39.09:743,39,0	1/1:18,0:26:7.59:759,8,0	1/1:10,18:32:13.92:347,14,0	1/1:10,16:27:48.48:1013,48,0	1/1:20,0:23:15.04:357,15,0	1/1:6,0:7:9.03:161,9,0
chr10	26643643	.	T	TCCTTCCTT	12542.87	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-2.653;DP=701;FS=0.000;HRun=0;HaplotypeScore=139.8205;InbreedingCoeff=0.5295;MQ=52.14;MQ0=8;MQRankSum=0.517;QD=18.86;ReadPosRankSum=1.480;VQSLOD=4.2081;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:28:26.08:496,26,0	1/1:14,0:14:24.07:540,24,0	0/0:19,0:6:3.01:0,3,54	0/0:15,0:7:6.02:0,6,97	1/1:34,0:34:36.05:920,36,0	1/1:47,0:47:6.01:149,6,0	1/1:33,0:32:42.11:852,42,0	1/1:31,0:29:30.04:396,30,0	1/1:18,0:18:6.02:247,6,0	1/1:20,0:19:27.08:599,27,0	1/1:18,0:18:18.01:491,18,0	1/1:25,0:25:8.86:228,9,0	1/1:40,0:39:18.06:738,18,0	1/1:23,0:23:9.03:363,9,0	1/1:36,0:36:53.53:1098,54,0	1/1:42,0:42:9.92:372,10,0	1/1:26,0:26:11.54:344,12,0	1/1:16,0:16:15.23:254,15,0	1/1:16,0:16:4.79:48,5,0	1/1:31,0:31:23.97:427,24,0	1/1:10,0:10:9.74:267,10,0	1/1:32,0:31:11.75:340,12,0	1/1:18,0:18:39.09:743,39,0	1/1:25,0:24:7.59:759,8,0	1/1:32,0:32:9.50:340,9,0	1/1:24,0:24:48.48:1013,48,0	1/1:10,10:21:15.04:357,15,0	1/1:5,0:5:9.03:161,9,0
chr10	26644420	.	TAGCC	T	23027.50	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=6.584;DP=586;FS=7.239;HRun=0;HaplotypeScore=109.4136;InbreedingCoeff=0.9472;MQ=85.68;MQ0=0;MQRankSum=-8.082;QD=45.24;ReadPosRankSum=6.891;VQSLOD=5.0308;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,18:19:33.11:607,33,0	1/1:1,10:11:30.10:552,30,0	0/0:22,0:22:54.19:0,54,1398	0/0:19,0:19:50.93:0,51,1185	1/1:2,32:34:78.27:1435,78,0	1/1:2,24:26:66.23:1214,66,0	1/1:0,10:10:24.08:441,24,0	0/0:31,0:31:84.29:0,84,2128	1/1:1,21:22:54.19:993,54,0	1/1:4,28:32:81.28:1470,81,0	1/1:0,20:20:57.20:1048,57,0	1/1:0,17:17:48.16:883,48,0	1/1:2,32:34:93.32:1711,93,0	1/1:2,17:19:45.15:828,45,0	1/1:0,25:25:63.22:1159,63,0	1/1:5,20:25:45.15:828,45,0	0/0:5,0:5:15.05:0,15,396	1/1:1,8:9:24.08:441,24,0	1/1:1,21:22:63.13:1048,63,0	1/1:1,17:18:45.15:828,45,0	1/1:2,13:15:30.10:552,30,0	1/1:2,17:19:48.16:883,48,0	1/1:1,22:23:48.16:883,48,0	1/1:1,27:28:81.28:1490,81,0	1/1:1,23:24:60.21:1104,60,0	1/1:1,28:29:84.29:1525,84,0	1/1:3,24:27:57.20:1048,57,0	1/1:0,1:1:3.01:55,3,0
chr10	26645731	.	AGTGTGTGT	A	3152.17	PASS	AB=0.797;AC=39;AF=0.722;AN=54;BaseQRankSum=3.405;DP=657;FS=4.557;HRun=0;HaplotypeScore=154.7417;InbreedingCoeff=0.3566;MQ=61.08;MQ0=15;MQRankSum=-3.304;QD=6.78;ReadPosRankSum=1.682;VQSLOD=2.5575;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:24,9:33:2.55:20,3,0	1/1:6,2:8:6.02:149,6,0	./.	0/0:34,0:22:0.47:0,0,1	1/1:14,0:14:5.99:53,6,0	1/1:6,7:14:11.93:239,12,0	1/1:19,8:27:2.83:74,3,0	0/0:33,0:32:12.04:0,12,179	0/1:20,0:20:17.93:29,0,18	0/0:22,0:23:0.78:0,1,103	1/1:10,5:16:3.01:56,3,0	1/1:24,9:34:12.50:252,13,0	0/1:19,11:30:6.92:283,0,7	1/1:13,2:15:9.48:147,9,0	0/0:16,0:23:17.96:0,18,145	1/1:15,9:24:14.38:330,14,0	0/0:22,0:30:24.08:0,24,771	0/0:9,0:9:0:0,0,0	1/1:9,2:11:4.54:111,5,0	1/1:8,6:15:15.01:300,15,0	1/1:40,0:39:1.35:3,1,0	1/1:13,13:26:6.02:149,6,0	1/1:15,0:15:3:25,3,0	0/1:22,16:37:5.98:283,0,6	1/1:14,7:21:3.01:74,3,0	1/1:15,9:23:20.98:365,21,0	1/1:19,6:25:9.03:223,9,0	1/1:8,4:13:7.57:134,8,0
chr10	26647108	.	C	CGAA	20947.56	PASS	AB=0.584;AC=46;AF=0.821;AN=56;BaseQRankSum=-11.299;DP=624;FS=18.865;HRun=0;HaplotypeScore=77.2254;InbreedingCoeff=0.7777;MQ=62.54;MQ0=5;MQRankSum=2.318;QD=40.99;ReadPosRankSum=6.094;VQSLOD=3.8184;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,44:49:99:2517,123,0	1/1:2,3:5:12.04:229,12,0	0/0:27,0:18:33.11:0,33,462	0/0:26,0:19:39.08:0,39,552	1/1:5,23:28:60.16:1186,60,0	1/1:5,16:20:39.13:798,39,0	1/1:4,19:23:51.11:963,51,0	0/0:31,0:30:57.18:0,57,792	1/1:8,15:23:36.12:737,36,0	1/1:5,18:24:57.17:1082,57,0	1/1:6,9:15:29.93:484,30,0	0/1:3,13:16:4.24:656,0,4	1/1:5,18:23:45.15:920,45,0	1/1:10,14:24:39.10:756,39,0	1/1:9,21:30:60.21:1228,60,0	1/1:1,19:22:51.18:1044,51,0	0/0:29,0:29:72.24:0,72,1036	1/1:5,19:24:48.16:982,48,0	1/1:5,6:10:21.07:430,21,0	1/1:4,13:17:33.06:633,33,0	1/1:8,21:29:51.18:1044,51,0	1/1:2,13:17:36.12:737,36,0	1/1:4,7:10:18.06:369,18,0	1/1:4,21:25:60.21:1228,60,0	0/1:6,9:16:13.24:523,0,13	1/1:4,18:24:57.13:1053,57,0	1/1:5,18:25:51.18:1043,51,0	1/1:2,6:8:15.05:307,15,0
chr10	26650486	.	CAG	C	1079.28	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.525;DP=632;FS=3.939;HRun=0;HaplotypeScore=101.9056;InbreedingCoeff=0.9991;MQ=85.92;MQ0=0;MQRankSum=-1.993;QD=44.97;ReadPosRankSum=1.061;VQSLOD=4.9345;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:66.21:0,66,1274	0/0:18,0:18:54.19:0,54,1097	0/0:22,0:22:66.23:0,66,1264	0/0:19,0:19:48.13:0,48,861	0/0:29,0:29:87.28:0,87,1727	0/0:18,0:18:54.19:0,54,1069	0/0:14,0:14:39.13:0,39,792	0/0:25,0:25:75.25:0,75,1475	0/0:26,0:26:78.27:0,78,1572	0/0:18,0:18:54.18:0,54,1047	0/0:16,0:16:48.16:0,48,974	0/0:32,0:32:96.33:0,96,1902	0/0:31,0:31:93.32:0,93,1860	0/0:29,0:29:87.28:0,87,1701	1/1:0,24:24:72.25:1174,72,0	0/0:27,0:27:81.28:0,81,1617	0/0:18,0:18:54.17:0,54,1061	0/0:10,0:10:30.10:0,30,607	0/0:29,0:30:87.30:0,87,1699	0/0:26,0:26:78.27:0,78,1571	0/0:32,0:32:93.31:0,93,1837	0/0:17,0:17:51.17:0,51,996	0/0:16,0:16:45.13:0,45,849	0/0:22,0:22:60.19:0,60,1181	0/0:25,0:25:72.24:0,72,1426	0/0:23,0:23:66.23:0,66,1326	0/0:31,0:30:90.29:0,90,1775	0/0:11,0:11:33.11:0,33,670
chr10	26653822	.	CAA	C	16055.55	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=9.571;DP=543;FS=2.404;HRun=6;HaplotypeScore=126.1453;InbreedingCoeff=0.9481;MQ=72.13;MQ0=0;MQRankSum=-3.606;QD=33.73;ReadPosRankSum=4.931;VQSLOD=3.7024;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,11:14:30.10:400,30,0	1/1:0,8:8:21.07:280,21,0	0/0:13,0:13:24.86:0,25,511	0/0:8,0:8:18.03:0,18,280	1/1:2,19:21:57.19:755,57,0	1/1:1,30:31:81.26:1080,81,0	1/1:3,22:25:57.18:760,57,0	0/0:29,0:29:78.26:0,78,1379	1/1:3,8:11:27.07:344,27,0	1/1:3,17:20:51.12:644,51,0	1/1:1,22:23:66.21:879,66,0	1/1:3,19:22:51.17:679,51,0	1/1:1,19:20:57.19:759,57,0	1/1:2,16:18:45.15:600,45,0	1/1:5,19:24:60.18:785,60,0	1/1:0,20:20:54.18:720,54,0	0/0:17,0:17:48.14:0,48,820	1/1:1,8:9:24.08:320,24,0	1/1:5,22:27:66.21:879,66,0	1/1:5,31:36:84.27:1118,84,0	1/1:1,20:21:54.18:716,54,0	1/1:1,12:13:36.12:480,36,0	1/1:3,23:26:72.20:939,72,0	1/1:3,17:20:51.17:680,51,0	1/1:4,24:28:69.22:919,69,0	1/1:1,10:11:30.10:400,30,0	1/1:4,23:27:66.21:880,66,0	1/1:0,1:1:3.01:40,3,0
chr10	26654582	.	CT	C	700.68	PASS	AB=0.976;AC=7;AF=0.125;AN=56;BaseQRankSum=4.513;DP=426;FS=0.000;HRun=10;HaplotypeScore=51.4658;InbreedingCoeff=0.4385;MQ=76.37;MQ0=0;MQRankSum=-0.419;QD=9.22;ReadPosRankSum=1.671;VQSLOD=1.7761;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:27:53.98:0,54,578	0/0:11,0:11:1.58:0,2,195	0/1:9,0:8:13.41:13,0,71	0/1:12,1:12:3.94:4,0,151	0/0:19,1:20:19.03:0,19,410	0/0:16,0:16:39.08:0,39,416	0/0:7,0:7:15.02:0,15,151	1/1:9,12:22:35:289,35,0	0/0:14,0:14:36.09:0,36,390	0/0:11,0:11:27.06:0,27,285	0/0:11,1:12:0.97:0,1,218	0/0:12,0:15:32.92:0,33,346	0/0:18,0:18:48.08:0,48,510	0/0:23,0:23:60.16:0,60,664	0/0:24,0:24:63.12:0,63,659	0/0:20,0:20:54.05:0,54,556	1/1:1,22:23:59.99:521,60,0	0/0:4,0:5:8.86:0,9,80	0/0:16,0:16:36.09:0,36,392	0/0:17,0:17:45.03:0,45,446	0/0:6,0:6:15.03:0,15,159	0/0:5,0:5:6.01:0,6,59	0/0:13,0:13:29.99:0,30,298	0/0:10,0:10:30.07:0,30,324	0/0:19,0:19:45.08:0,45,462	0/0:16,1:17:16.05:0,16,398	0/0:23,1:24:39.14:0,39,625	0/1:9,0:9:6.18:6,0,117
chr10	26655229	.	CGGGTGGGTCAA	C	34673.35	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=13.947;DP=612;FS=0.860;HRun=0;HaplotypeScore=220.4108;InbreedingCoeff=0.9174;MQ=72.34;MQ0=0;MQRankSum=-14.768;QD=69.49;ReadPosRankSum=5.288;VQSLOD=4.0130;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,11:13:27.09:962,27,0	1/1:1,5:6:12.04:428,12,0	0/0:22,0:22:63.22:0,63,2747	0/0:13,0:13:39.13:0,39,2027	1/1:4,25:29:51.17:1791,51,0	1/1:3,24:27:54.18:1924,54,0	1/1:3,10:13:21.07:741,21,0	0/0:33,0:33:96.33:0,96,4938	1/1:1,15:16:33.11:1175,33,0	1/1:4,23:27:66.21:2083,66,0	1/1:4,27:31:60.21:2080,60,0	1/1:3,20:23:48.16:1707,48,0	1/1:2,27:30:66.14:2351,66,0	1/1:4,21:25:45.15:1602,45,0	0/0:22,0:22:66.23:0,66,3699	1/1:1,21:22:54.19:1923,54,0	0/0:23,0:23:69.24:0,69,3854	1/1:0,4:4:6.02:178,6,0	1/1:3,13:16:39.02:1146,39,0	1/1:3,33:36:57.20:1991,57,0	1/1:1,9:10:9.03:319,9,0	1/1:4,26:30:69.24:2454,69,0	1/1:0,26:26:45.62:1570,46,0	1/1:4,9:13:5.39:212,5,0	1/1:3,25:28:60.20:2137,60,0	1/1:6,26:32:74.36:2487,74,0	1/1:5,34:39:87.30:3091,87,0	1/1:0,3:3:9.03:320,9,0
chr10	26655361	.	A	AAAAC	21910.63	PASS	AB=1.000;AC=53;AF=0.946;AN=56;BaseQRankSum=-5.109;DP=618;FS=1.166;HRun=0;HaplotypeScore=85.3204;InbreedingCoeff=0.6993;MQ=70.30;MQ0=5;MQRankSum=-2.858;QD=36.82;ReadPosRankSum=3.452;VQSLOD=4.8817;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,15:22:27.98:650,28,0	1/1:5,6:11:15.05:360,15,0	0/1:25,0:20:0.83:1,0,125	0/0:23,0:20:8.37:0,8,256	1/1:9,17:29:51.09:1140,51,0	1/1:6,18:23:33.11:792,33,0	1/1:5,6:11:9.03:216,9,0	1/1:17,13:30:39.11:813,39,0	1/1:7,17:25:39.13:937,39,0	1/1:6,19:25:60.20:1365,60,0	1/1:13,31:44:26.99:1554,27,0	1/1:6,6:13:21.07:501,21,0	1/1:6,22:29:51.14:1223,51,0	1/1:10,15:26:33.11:789,33,0	1/1:7,10:17:30.10:699,30,0	1/1:8,22:30:57.20:1368,57,0	1/1:11,13:23:36.12:864,36,0	1/1:6,11:18:26.39:642,26,0	1/1:10,10:20:33.04:720,33,0	1/1:7,19:26:54.19:1277,54,0	1/1:1,5:7:12.04:288,12,0	1/1:8,11:19:39.12:883,39,0	1/1:8,15:24:27.09:649,27,0	1/1:6,8:14:15.05:360,15,0	1/1:3,15:19:42.14:1009,42,0	1/1:5,21:24:54.19:1296,54,0	1/1:5,23:29:54.19:1296,54,0	1/1:1,4:5:9.03:216,9,0
chr10	26656761	.	GT	G	884.07	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.752;DP=453;FS=8.281;HRun=8;HaplotypeScore=44.8049;InbreedingCoeff=0.9197;MQ=67.79;MQ0=0;MQRankSum=0.924;QD=20.56;ReadPosRankSum=-1.914;VQSLOD=2.3451;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:51.16:0,51,615	0/0:4,0:4:12.04:0,12,145	0/0:8,0:8:21.03:0,21,232	0/0:4,0:4:8.47:0,8,65	0/0:18,0:19:51.02:0,51,589	0/0:17,0:17:48.15:0,48,579	0/0:7,0:7:21.06:0,21,254	1/1:3,21:24:63.07:601,63,0	0/0:12,0:12:36.11:0,36,435	0/0:21,0:21:57.17:0,57,680	0/0:23,0:24:69.05:0,69,784	0/0:10,0:10:27.08:0,27,326	0/0:24,0:24:63.17:0,63,735	0/0:19,0:19:54.17:0,54,652	0/0:17,0:17:51.16:0,51,615	0/0:23,0:23:69.21:0,69,833	1/1:3,16:19:42.04:404,42,0	0/0:21,0:21:63.11:0,63,727	0/0:23,0:23:54.17:0,54,652	0/0:18,0:18:48.11:0,48,563	0/0:15,0:15:42.13:0,42,507	0/0:5,0:5:12.04:0,12,145	0/0:20,0:20:60.18:0,60,720	0/0:11,0:11:30.08:0,30,350	0/0:19,0:19:54.17:0,54,652	0/0:29,0:29:84.24:0,84,1002	0/0:19,0:19:48.15:0,48,580	0/0:4,0:4:12.04:0,12,145
chr10	26657093	.	CCTTCACAGCA	C	26771.48	PASS	AC=46;AF=0.852;AN=54;BaseQRankSum=9.369;DP=427;FS=23.995;HRun=0;HaplotypeScore=147.1303;InbreedingCoeff=0.9764;MQ=83.43;MQ0=0;MQRankSum=-12.060;QD=77.60;ReadPosRankSum=7.610;VQSLOD=2.8075;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,12:13:27.09:810,27,0	1/1:0,4:4:12.04:395,12,0	0/0:19,0:19:48.13:0,48,1624	0/0:19,0:19:48.15:0,48,2129	1/1:0,12:12:27.09:878,27,0	1/1:1,21:22:48.16:1548,48,0	1/1:1,9:10:21.07:684,21,0	0/0:31,0:31:90.28:0,90,3664	1/1:0,21:21:57.20:1838,57,0	1/1:3,11:14:33.10:967,33,0	1/1:0,12:12:24.08:781,24,0	1/1:0,18:18:48.16:1574,48,0	1/1:1,13:14:21.07:688,21,0	1/1:0,20:20:51.18:1634,51,0	1/1:1,28:29:75.26:2450,75,0	1/1:0,17:17:48.16:1569,48,0	0/0:12,0:12:36.12:0,36,1898	1/1:0,9:9:18.06:569,18,0	1/1:0,19:19:57.09:1573,57,0	1/1:0,14:14:42.14:1349,42,0	./.	1/1:0,11:11:33.11:1087,33,0	1/1:0,14:14:42.14:1302,42,0	1/1:1,12:13:15.05:483,15,0	1/1:0,13:13:24.08:790,24,0	1/1:0,20:20:60.15:1651,60,0	1/1:2,19:21:51.18:1662,51,0	1/1:0,5:5:15.05:489,15,0
chr10	26657299	.	G	GA	1888.53	PASS	AB=0.800;AC=46;AF=0.852;AN=54;BaseQRankSum=2.017;DP=181;FS=3.128;HRun=8;HaplotypeScore=30.9429;InbreedingCoeff=0.4005;MQ=80.17;MQ0=0;MQRankSum=-3.433;QD=13.89;ReadPosRankSum=2.358;VQSLOD=2.4081;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,3:5:6.02:68,6,0	1/1:1,2:4:8.70:80,9,0	0/1:6,0:5:1.01:1,0,39	0/0:6,0:6:9.07:0,9,66	1/1:4,1:5:3.01:34,3,0	1/1:2,4:6:8.98:89,9,0	1/1:1,5:6:12.04:138,12,0	0/0:32,0:32:78.03:0,78,711	1/1:1,4:5:6.02:69,6,0	1/1:5,2:7:18.05:205,18,0	1/1:4,8:12:9.03:103,9,0	1/1:1,4:5:3.01:35,3,0	1/1:1,3:4:9.03:103,9,0	1/1:0,4:4:6:58,6,0	1/1:3,0:4:6:52,6,0	0/1:3,6:9:15.43:92,0,15	0/0:6,0:6:5.86:0,6,54	1/1:2,1:2:5.98:54,6,0	1/1:7,3:10:14.88:172,15,0	1/1:6,0:6:12.03:136,12,0	./.	1/1:1,3:4:3.01:35,3,0	1/1:0,4:4:6.02:69,6,0	1/1:1,5:6:6.02:69,6,0	1/1:3,3:6:12.04:138,12,0	1/1:3,5:8:12.02:128,12,0	1/1:5,0:5:6.02:68,6,0	1/1:0,1:1:3.01:35,3,0
chr10	26657307	.	AT	A	393.11	PASS	AB=0.919;AC=20;AF=0.370;AN=54;BaseQRankSum=0.932;DP=154;FS=4.521;HRun=1;HaplotypeScore=35.1352;InbreedingCoeff=0.3320;MQ=80.60;MQ0=0;MQRankSum=-0.514;QD=7.02;ReadPosRankSum=-3.413;VQSLOD=-0.4995;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,2:4:6.02:68,6,0	0/0:3,0:3:2.21:0,2,8	0/0:6,0:5:4.03:0,4,45	0/0:7,0:6:9.70:0,10,73	1/1:1,1:2:3.01:34,3,0	0/1:4,0:4:4.21:18,0,4	0/0:5,0:5:9.41:0,9,39	0/0:33,0:33:96.06:0,96,1194	0/0:4,0:4:5.42:0,5,23	1/1:2,4:6:14.21:119,14,0	0/1:9,0:9:14.43:25,0,14	0/0:4,0:4:2.87:0,3,15	1/1:4,0:4:8.59:61,9,0	1/1:5,0:5:0.10:19,0,0	0/0:4,0:4:5.88:0,6,36	0/0:7,0:7:2.68:0,3,54	0/0:6,0:6:8.78:0,9,101	1/1:1,2:2:2.12:18,2,0	0/1:6,1:7:14.06:14,0,108	1/1:0,4:4:11.62:111,12,0	./.	0/0:3,0:3:2.73:0,3,12	0/0:4,0:4:5.49:0,5,24	0/0:5,0:5:5.34:0,5,22	0/1:3,1:4:22.38:22,0,28	0/0:5,0:5:10:0,10,47	1/1:0,3:3:5.60:43,6,0	0/0:1,0:1:2.22:0,2,7
chr10	26657332	.	C	CATATAT	658.74	PASS	AB=0.986;AC=10;AF=0.250;AN=40;BaseQRankSum=-4.567;DP=126;FS=0.000;HRun=0;HaplotypeScore=53.8781;InbreedingCoeff=0.1537;MQ=74.23;MQ0=1;MQRankSum=0.876;QD=8.78;ReadPosRankSum=-4.505;VQSLOD=-0.2430;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:3,0:2:0.89:2,1,0	0/0:4,0:4:8.89:0,9,62	0/0:6,0:4:0:0,0,1	0/1:9,0:5:0.11:0,0,0	./.	0/0:1,0:1:2.90:0,3,16	0/0:1,0:1:2.90:0,3,16	0/1:31,0:33:28.06:536,0,28	./.	0/1:11,0:11:8.02:13,0,8	./.	./.	0/0:2,0:2:1.93:0,2,10	0/0:2,0:2:2.99:0,3,23	0/0:4,0:4:6.02:0,6,84	0/0:5,0:5:5.86:0,6,38	1/1:3,6:11:6.02:199,6,0	0/0:2,0:2:3.44:0,3,21	0/1:4,0:4:0.17:0,0,31	0/0:4,0:4:2.88:0,3,15	./.	./.	./.	./.	1/1:3,0:3:0.89:2,1,0	0/0:2,0:2:5.95:0,6,42	0/0:3,0:3:5.70:0,6,31	0/0:1,0:1:2.98:0,3,22
chr10	26657344	.	TA	T	279.44	PASS	AB=0.683;AC=18;AF=0.360;AN=50;BaseQRankSum=2.056;DP=144;FS=4.212;HRun=1;HaplotypeScore=45.2334;InbreedingCoeff=0.2619;MQ=63.85;MQ0=4;MQRankSum=-2.043;QD=4.23;ReadPosRankSum=0.727;VQSLOD=0.5594;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:3:1.55:0,2,4	0/0:3,1:4:3.86:0,4,23	0/0:5,0:4:1.12:0,1,35	0/0:9,0:4:5.45:0,5,50	0/1:5,2:7:0:0,0,0	0/0:1,1:1:2.99:0,3,23	1/1:2,0:2:2.84:14,3,0	0/0:28,0:28:84.25:0,84,1125	0/1:0,2:2:0:0,0,0	0/1:2,9:11:18.09:139,0,18	0/1:0,5:5:0:0,0,0	./.	0/1:2,0:2:7.37:7,0,14	0/0:3,0:3:0.41:0,0,1	0/1:4,0:4:3.88:4,0,4	0/0:2,2:4:3.74:0,4,23	0/0:14,0:14:12.03:0,12,139	0/1:2,0:2:9.57:10,0,23	1/1:6,1:7:14.53:153,15,0	0/1:0,5:5:0:0,0,0	./.	0/1:0,1:1:0:0,0,0	0/1:0,4:4:0:0,0,0	./.	1/1:7,2:8:2.74:12,3,0	0/0:2,0:2:0.35:0,0,1	1/1:4,1:5:8.81:54,9,0	0/0:2,0:1:0:0,0,0
chr10	26657345	.	A	AT	826.80	PASS	AB=0.917;AC=33;AF=0.660;AN=50;BaseQRankSum=4.099;DP=144;FS=2.183;HRun=1;HaplotypeScore=42.9298;InbreedingCoeff=0.4668;MQ=60.44;MQ0=4;MQRankSum=-4.772;QD=10.34;ReadPosRankSum=2.212;VQSLOD=1.6285;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:1,3:3:2.80:0,3,13	1/1:2,2:4:7.27:80,7,0	0/0:4,0:3:3.48:0,3,39	0/0:9,0:4:1.03:0,1,35	0/1:2,5:6:0:0,0,0	1/1:2,0:1:1.82:5,2,0	1/1:0,2:2:3.01:38,3,0	0/0:28,0:28:76.33:0,76,869	0/1:3,0:3:0:0,0,0	1/1:11,0:11:23.35:224,23,0	0/1:5,0:5:0:0,0,0	./.	1/1:2,0:2:4.41:15,4,0	1/1:0,3:3:3.01:38,3,0	0/0:4,0:4:8.38:0,8,42	1/1:3,1:4:5.05:44,5,0	0/0:14,0:14:8.73:0,9,113	1/1:0,2:2:2.31:37,2,0	1/1:5,2:7:21.05:237,21,0	1/1:5,0:5:0.47:2,0,0	./.	0/1:1,0:1:0:0,0,0	0/1:4,0:4:0:0,0,0	./.	1/1:2,7:8:3:29,3,0	1/1:0,2:2:6.02:76,6,0	1/1:1,4:5:8.99:96,9,0	1/1:0,2:1:3.01:38,3,0
chr10	26657348	.	TA	T	773.49	PASS	AB=1.000;AC=39;AF=0.780;AN=50;BaseQRankSum=5.224;DP=157;FS=1.922;HRun=1;HaplotypeScore=44.8860;InbreedingCoeff=0.4551;MQ=63.39;MQ0=4;MQRankSum=-3.717;QD=7.73;ReadPosRankSum=0.491;VQSLOD=0.8602;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,0:3:2.84:14,3,0	1/1:5,0:5:10.63:54,11,0	0/0:4,0:3:1.28:0,1,29	0/0:10,0:5:3.75:0,4,50	1/1:7,0:6:2.53:19,3,0	1/1:2,0:1:2.04:6,2,0	1/1:3,0:3:3.76:17,4,0	0/0:29,0:29:86.91:0,87,858	1/1:5,0:5:6.86:48,7,0	1/1:12,0:12:28.42:214,28,0	0/1:5,0:5:0:1,0,0	./.	1/1:2,0:2:5.40:25,5,0	1/1:4,0:4:4.99:33,5,0	1/1:4,0:4:4.19:30,4,0	1/1:4,0:4:5.06:16,5,0	0/0:12,0:12:12.01:0,12,125	1/1:2,0:2:3.37:17,3,0	1/1:3,5:8:22.97:198,23,0	0/1:5,0:5:0:1,0,0	./.	0/1:1,0:1:0:0,0,0	1/1:6,0:6:8.58:69,9,0	./.	1/1:11,0:10:6.41:43,6,0	1/1:2,0:2:4.87:17,5,0	1/1:5,0:5:8.80:53,9,0	1/1:3,0:2:5.47:30,5,0
chr10	26663286	.	CT	C	711.89	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-1.293;DP=529;FS=5.634;HRun=10;HaplotypeScore=68.6690;InbreedingCoeff=0.9897;MQ=70.18;MQ0=0;MQRankSum=-1.063;QD=16.56;ReadPosRankSum=-1.718;VQSLOD=3.5952;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:51.11:0,51,552	0/0:6,0:6:18.05:0,18,199	0/0:14,0:16:27.03:0,27,278	0/0:17,0:16:42.09:0,42,441	0/0:24,0:24:57.15:0,57,630	0/0:31,0:31:81.20:0,81,880	0/0:14,0:14:33.09:0,33,365	1/1:6,21:27:62.98:547,63,0	0/0:21,0:21:57.14:0,57,622	0/0:23,0:23:51.13:0,51,552	0/0:21,0:21:54.13:0,54,589	0/0:13,0:13:36.06:0,36,370	0/0:26,0:26:69.19:0,69,763	0/0:14,0:14:36.09:0,36,391	0/0:17,0:17:51.13:0,51,557	0/0:18,0:18:54.13:0,54,588	1/1:2,14:16:32.97:286,33,0	0/0:19,0:19:45.12:0,45,498	0/0:16,0:16:39.10:0,39,424	0/0:23,0:24:69.02:0,69,744	0/0:28,0:28:69.18:0,69,755	0/0:9,0:9:24.06:0,24,265	0/0:18,0:19:44.94:0,45,470	0/0:16,0:16:39.11:0,39,431	0/0:21,0:21:57.15:0,57,623	0/0:23,0:23:54.13:0,54,582	0/0:23,0:24:72:0,72,760	0/0:6,0:6:18.02:0,18,186
chr10	26663434	.	C	CTA	462.19	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-2.314;DP=480;FS=1.107;HRun=0;HaplotypeScore=63.3767;InbreedingCoeff=0.8368;MQ=78.65;MQ0=0;MQRankSum=0.621;QD=25.68;ReadPosRankSum=0.139;VQSLOD=3.8364;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:37.22:0,37,639	0/0:5,0:5:15.05:0,15,193	0/0:17,0:17:30.87:0,31,320	0/0:11,0:11:11.56:0,12,89	0/0:12,0:12:29.89:0,30,360	0/0:28,0:28:69.22:0,69,888	0/0:7,0:7:15.05:0,15,193	0/0:36,0:36:90.28:0,90,1146	0/0:15,0:15:36.11:0,36,451	0/0:14,0:14:33.11:0,33,425	0/0:17,0:17:45.13:0,45,555	0/0:14,0:14:27.09:0,27,347	0/0:22,0:22:57.19:0,57,733	0/0:21,0:21:51.17:0,51,656	1/1:2,16:18:33.11:557,33,0	0/0:18,0:18:48.15:0,48,605	0/0:27,0:27:72.23:0,72,926	0/0:15,0:15:36.05:0,36,428	0/0:18,0:18:45.15:0,45,578	0/0:22,0:22:57.14:0,57,704	0/0:10,0:10:15.05:0,15,193	0/0:3,0:3:6.02:0,6,77	0/0:7,0:7:21.05:0,21,246	0/0:17,0:17:33.11:0,33,424	0/0:19,0:19:48.15:0,48,605	0/0:17,0:17:45.15:0,45,578	0/0:24,0:24:60.19:0,60,760	0/0:21,0:21:45.11:0,45,560
chr10	26663495	.	AACAT	A	8420.45	PASS	AC=50;AF=0.962;AN=52;BaseQRankSum=-5.444;DP=557;FS=0.982;HRun=0;HaplotypeScore=99.8098;InbreedingCoeff=0.5204;MQ=58.11;MQ0=14;MQRankSum=0.269;QD=18.63;ReadPosRankSum=3.542;VQSLOD=4.2236;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,15:25:17.55:239,18,0	1/1:5,5:10:12.04:193,12,0	./.	./.	1/1:6,13:19:24.08:385,24,0	1/1:12,7:19:12.04:193,12,0	1/1:3,12:15:18.06:289,18,0	0/0:24,0:61:31.24:0,31,269	1/1:6,14:20:27.09:434,27,0	1/1:7,11:18:36.12:563,36,0	1/1:5,18:22:41.97:561,42,0	1/1:1,9:10:9.03:144,9,0	1/1:9,12:21:18.06:278,18,0	1/1:12,16:28:21.07:336,21,0	1/1:13,0:19:3.57:164,4,0	1/1:4,23:27:48.16:770,48,0	1/1:8,0:13:5.96:47,6,0	1/1:10,2:12:7.78:201,8,0	1/1:14,9:21:27.06:381,27,0	1/1:5,14:20:33.04:455,33,0	1/1:2,7:9:6.91:98,7,0	1/1:2,5:7:15.05:241,15,0	1/1:5,2:6:8.90:141,9,0	1/1:7,13:20:18.06:289,18,0	1/1:7,11:18:24.08:385,24,0	1/1:4,18:23:57.12:816,57,0	1/1:8,21:29:48.16:771,48,0	1/1:10,6:16:3.01:48,3,0
chr10	26664611	.	AT	A	14675.98	PASS	AB=1.000;AC=53;AF=0.946;AN=56;BaseQRankSum=1.844;DP=680;FS=6.787;HRun=9;HaplotypeScore=163.6264;InbreedingCoeff=0.8142;MQ=76.81;MQ0=0;MQRankSum=-8.101;QD=22.10;ReadPosRankSum=4.483;VQSLOD=3.4137;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,38:41:99:988,108,0	1/1:2,9:11:27.01:247,27,0	0/0:16,0:16:33.05:0,33,363	0/1:16,0:16:1.49:1,0,368	1/1:5,22:27:72.02:653,72,0	1/1:4,17:21:42.01:384,42,0	1/1:2,26:28:69.03:632,69,0	1/1:3,26:29:74.97:669,75,0	1/1:3,21:24:63.03:577,63,0	1/1:2,32:35:95.05:847,95,0	1/1:2,21:23:53.93:477,54,0	1/1:2,30:32:84.04:769,84,0	1/1:2,23:26:69.04:631,69,0	1/1:3,29:32:72.04:659,72,0	1/1:0,39:39:99:1043,114,0	1/1:2,20:22:54.03:494,54,0	1/1:5,19:24:51.02:467,51,0	1/1:2,7:9:21.01:192,21,0	1/1:7,12:19:39:353,39,0	1/1:1,26:27:72.03:659,72,0	1/1:4,31:35:87.03:796,87,0	1/1:3,18:21:57.01:516,57,0	1/1:2,16:18:36.01:330,36,0	1/1:1,21:22:57.03:522,57,0	1/1:4,16:20:42.02:384,42,0	1/1:2,20:22:60:540,60,0	1/1:10,19:29:66:598,66,0	1/1:0,12:12:27.01:247,27,0
chr10	26664754	.	A	AT	18717.33	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-9.535;DP=637;FS=1.728;HRun=3;HaplotypeScore=63.1133;InbreedingCoeff=0.9979;MQ=85.36;MQ0=0;MQRankSum=-4.643;QD=36.63;ReadPosRankSum=4.610;VQSLOD=5.3055;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,34:35:84.24:1154,84,0	1/1:1,12:13:30.10:416,30,0	0/0:24,0:24:55.35:0,55,662	0/0:20,0:20:45.12:0,45,523	1/1:1,15:16:39.13:546,39,0	1/1:1,27:28:75.25:1050,75,0	1/1:2,18:20:54.18:756,54,0	0/0:26,0:26:66.20:0,66,789	1/1:0,20:20:57.19:798,57,0	1/1:0,36:36:99:1410,102,0	1/1:1,15:16:45.15:630,45,0	1/1:1,26:27:66.22:924,66,0	1/1:2,18:20:54.18:756,54,0	1/1:0,23:23:57.19:798,57,0	0/0:30,0:30:87.27:0,87,1044	1/1:2,17:19:51.17:714,51,0	0/0:26,0:26:75.22:0,75,889	1/1:1,14:15:39.13:546,39,0	1/1:5,24:29:75.24:1025,75,0	1/1:2,16:18:48.12:650,48,0	1/1:2,17:19:48.16:672,48,0	1/1:0,17:17:45.15:630,45,0	1/1:1,13:14:39.13:539,39,0	1/1:0,36:36:99:1428,102,0	1/1:1,17:18:42.14:588,42,0	1/1:0,29:29:84.28:1173,84,0	1/1:2,31:33:90.30:1260,90,0	1/1:1,8:9:18.06:252,18,0
chr10	26665118	.	GCA	G	469.22	PASS	AB=0.924;AC=18;AF=0.375;AN=48;BaseQRankSum=4.435;DP=545;FS=12.035;HRun=0;HaplotypeScore=74.9633;InbreedingCoeff=-0.3038;MQ=62.79;MQ0=20;MQRankSum=-1.135;QD=1.52;ReadPosRankSum=-2.457;VQSLOD=0.1075;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,5:40:1.02:0,1,377	0/1:4,1:4:17.88:27,0,18	./.	./.	0/1:26,2:28:91.40:91,0,189	0/0:21,0:22:27.02:0,27,341	0/1:25,1:26:22.56:23,0,421	1/1:22,0:22:2.37:8,2,0	0/1:8,2:10:26.49:26,0,39	0/1:16,0:16:60.89:72,0,61	0/1:14,0:14:8.39:8,0,270	0/1:12,0:12:43.92:44,0,57	0/0:11,0:11:11.71:0,12,139	0/0:18,0:17:30.99:0,31,436	./.	0/1:8,1:9:11.45:11,0,242	1/1:15,0:19:14.32:75,14,0	0/1:18,2:19:70.23:70,0,220	./.	0/0:17,0:18:3.91:0,4,205	0/1:22,0:18:11.19:11,0,225	0/1:19,1:20:5.45:5,0,301	0/0:18,0:18:18.06:0,18,253	0/1:32,5:36:99:118,0,351	0/1:19,3:21:5.44:5,0,324	0/0:20,0:20:17.27:0,17,216	0/1:21,3:24:17.11:17,0,177	0/0:6,0:5:8.98:0,9,89
chr10	26665241	.	A	AC	22865.10	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-7.997;DP=600;FS=9.496;HRun=1;HaplotypeScore=54.1707;InbreedingCoeff=0.9838;MQ=78.26;MQ0=0;MQRankSum=-9.754;QD=40.61;ReadPosRankSum=4.764;VQSLOD=4.8350;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,32:32:87.18:1251,87,0	1/1:0,4:4:12.04:180,12,0	0/0:19,0:19:54.17:0,54,694	0/0:18,0:18:48.12:0,48,578	1/1:0,21:21:54.18:802,54,0	1/1:0,22:22:60.20:899,60,0	1/1:0,18:18:51.17:764,51,0	1/1:0,31:31:93.30:1369,93,0	1/1:0,19:19:57.19:854,57,0	1/1:2,33:35:99:1506,102,0	1/1:1,22:23:66.22:988,66,0	1/1:1,11:12:33.11:495,33,0	1/1:1,17:18:42.14:629,42,0	1/1:0,12:12:33.11:495,33,0	1/1:1,17:18:42.14:629,42,0	1/1:0,18:18:48.16:719,48,0	1/1:2,26:28:66.18:956,66,0	1/1:1,16:17:48.16:718,48,0	1/1:2,23:25:66.21:968,66,0	1/1:1,32:33:93.14:1304,93,0	1/1:1,21:22:54.18:809,54,0	1/1:1,21:22:63.21:944,63,0	1/1:2,25:27:69.02:1033,69,0	1/1:0,15:15:45.07:646,45,0	1/1:0,23:23:69.23:1034,69,0	1/1:0,17:17:51.17:763,51,0	1/1:0,40:39:99:1659,111,0	1/1:0,11:11:30.10:450,30,0
chr10	26667133	.	C	CT	7490.84	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-6.742;DP=339;FS=27.402;HRun=8;HaplotypeScore=40.4289;InbreedingCoeff=0.8438;MQ=78.12;MQ0=2;MQRankSum=-4.299;QD=27.74;ReadPosRankSum=3.038;VQSLOD=3.1155;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,10:11:33.01:361,33,0	1/1:1,1:2:3.01:35,3,0	0/0:22,0:13:28.15:0,28,204	0/0:12,0:9:1.03:0,1,46	1/1:2,20:22:60.18:692,60,0	1/1:1,14:15:39.12:450,39,0	1/1:0,7:7:18.05:208,18,0	0/0:18,0:17:39.02:0,39,356	1/1:0,6:6:18.05:208,18,0	1/1:2,12:14:36.11:415,36,0	1/1:2,12:14:39.11:437,39,0	1/1:1,6:7:9.03:104,9,0	1/1:1,5:6:15:158,15,0	1/1:2,9:11:24.07:277,24,0	0/0:4,0:4:8.91:0,9,82	1/1:2,6:8:18.05:205,18,0	0/0:13,0:13:15.75:0,16,202	1/1:5,16:21:45.99:507,46,0	1/1:4,15:19:48.11:539,48,0	1/1:4,16:19:45.13:513,45,0	1/1:0,4:4:9.03:104,9,0	1/1:2,4:6:11.99:122,12,0	1/1:2,8:10:21.06:232,21,0	1/1:1,9:10:24.07:277,24,0	1/1:0,13:13:33.10:381,33,0	1/1:3,16:19:48.14:550,48,0	1/1:3,13:16:39.12:450,39,0	1/1:1,8:9:24.06:268,24,0
chr10	26667297	.	CA	C	799.80	PASS	AB=0.800;AC=23;AF=0.885;AN=26;BaseQRankSum=-3.249;DP=106;FS=31.299;HRun=2;HaplotypeScore=20.3976;InbreedingCoeff=0.2006;MQ=23.52;MQ0=36;MQRankSum=-0.886;QD=12.90;ReadPosRankSum=1.746;VQSLOD=0.3674;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	1/1:0,6:6:6.02:74,6,0	./.	1/1:3,1:1:3.01:37,3,0	0/0:6,0:4:11.84:0,12,90	0/1:3,1:2:31.13:31,0,38	1/1:2,7:7:18.02:205,18,0	1/1:2,3:4:6.02:74,6,0	1/1:0,2:2:6.02:74,6,0	./.	1/1:4,2:4:2.96:19,3,0	./.	1/1:1,5:4:6.02:74,6,0	./.	./.	./.	1/1:0,4:3:5.75:49,6,0	./.	1/1:1,2:3:3.01:37,3,0	./.	./.	1/1:0,4:4:6.02:74,6,0	./.	1/1:4,5:6:12.04:148,12,0	./.
chr10	26668325	.	A	AT	15052.49	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-9.392;DP=532;FS=0.000;HRun=5;HaplotypeScore=47.2558;InbreedingCoeff=0.9946;MQ=79.59;MQ0=0;MQRankSum=-3.669;QD=34.76;ReadPosRankSum=4.494;VQSLOD=4.5304;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,18:22:54.18:709,54,0	1/1:2,12:14:36.11:464,36,0	0/0:16,0:16:42.11:0,42,452	0/0:11,0:11:26.73:0,27,265	1/1:2,29:31:84.27:1105,84,0	1/1:5,29:34:84.27:1105,84,0	1/1:0,11:11:30.10:395,30,0	0/0:30,0:30:81.17:0,81,845	1/1:2,25:27:66.21:868,66,0	1/1:2,31:33:93.30:1222,93,0	1/1:1,26:27:69.22:908,69,0	1/1:0,10:10:30.10:395,30,0	1/1:0,21:21:63.20:829,63,0	1/1:2,20:22:60.20:790,60,0	0/0:20,0:20:51.12:0,51,548	1/1:2,17:19:45.15:592,45,0	0/0:22,0:22:60.15:0,60,645	1/1:1,12:13:33.11:434,33,0	1/1:1,17:18:51.14:654,51,0	1/1:0,17:17:51.12:651,51,0	1/1:1,6:7:15.05:197,15,0	1/1:1,11:12:30.10:395,30,0	1/1:0,15:15:36.12:474,36,0	1/1:0,9:9:21.07:276,21,0	1/1:0,15:15:36.03:435,36,0	1/1:0,21:21:63.18:812,63,0	1/1:0,22:22:66.21:868,66,0	1/1:0,13:13:36.12:474,36,0
chr10	26668585	.	T	TTG	6570.74	PASS	AB=0.635;AC=40;AF=0.769;AN=52;BaseQRankSum=3.784;DP=589;FS=30.422;HRun=0;HaplotypeScore=147.1102;InbreedingCoeff=0.7363;MQ=57.85;MQ0=8;MQRankSum=-0.087;QD=14.97;ReadPosRankSum=2.067;VQSLOD=2.5754;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	1/1:10,0:10:14.72:205,15,0	0/0:25,0:13:33.06:0,33,394	0/0:21,0:13:32.84:0,33,362	1/1:6,14:20:2.85:34,3,0	1/1:13,1:14:27.08:379,27,0	0/1:12,14:24:0.15:0,0,0	0/0:27,0:27:28.58:0,29,507	1/1:21,5:26:38.69:578,39,0	1/1:36,0:35:99:1217,99,0	1/1:19,1:20:35.79:547,36,0	1/1:11,20:31:15.11:192,15,0	1/1:13,11:24:17.52:258,18,0	1/1:23,2:24:45.11:633,45,0	0/0:16,0:16:13.62:0,14,131	1/1:21,1:21:44.72:619,45,0	0/0:13,0:13:15.09:0,15,137	1/1:2,5:7:5.51:60,6,0	1/1:19,1:20:47.69:578,48,0	1/1:5,15:20:6.01:76,6,0	1/1:12,23:34:2.90:44,3,0	1/1:10,8:20:5.99:81,6,0	1/1:4,11:15:2.37:8,2,0	0/1:7,11:18:0.01:0,0,0	./.	1/1:25,0:25:56.90:794,57,0	1/1:6,10:16:14.72:171,15,0	1/1:0,7:7:6.02:98,6,0
chr10	26668595	.	A	ATGTGTGTG	4675.93	PASS	AB=1.000;AC=46;AF=0.920;AN=50;BaseQRankSum=-3.476;DP=619;FS=0.000;HRun=0;HaplotypeScore=175.9141;InbreedingCoeff=0.1818;MQ=52.00;MQ0=12;MQRankSum=0.388;QD=8.71;ReadPosRankSum=2.944;VQSLOD=3.7663;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:27:0:0,0,0	1/1:8,0:8:8.43:227,8,0	./.	./.	1/1:25,0:25:6:73,6,0	1/1:15,0:15:4.69:27,5,0	1/1:29,0:27:15.98:123,16,0	1/1:35,0:34:41.53:287,42,0	1/1:27,2:29:36.62:535,37,0	1/1:42,0:39:32.52:346,33,0	1/1:18,0:19:9.01:120,9,0	1/1:24,0:25:12.49:157,12,0	1/1:23,0:22:17.83:186,18,0	1/1:24,1:23:17.96:382,18,0	1/1:20,0:20:5.02:205,5,0	1/1:22,0:21:24.28:233,24,0	1/1:12,0:13:6.90:138,7,0	1/1:7,0:7:9.02:149,9,0	1/1:22,0:23:23.98:191,24,0	1/1:22,0:21:3.01:68,3,0	0/1:35,0:34:30.71:31,0,38	1/1:18,1:19:8.22:148,8,0	1/1:19,0:19:11.83:281,12,0	0/0:20,0:19:0.25:0,0,1	./.	1/1:27,0:27:24.75:365,25,0	1/1:19,0:20:25.22:260,25,0	1/1:6,1:7:6.01:145,6,0
chr10	26668619	.	G	GTGTGTGTGTT	2496.60	PASS	AB=0.978;AC=20;AF=0.357;AN=56;BaseQRankSum=5.339;DP=601;FS=15.876;HRun=0;HaplotypeScore=182.6595;InbreedingCoeff=-0.4312;MQ=48.78;MQ0=11;MQRankSum=-5.544;QD=6.15;ReadPosRankSum=8.125;VQSLOD=0.5394;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:12.39:0,12,89	0/1:9,0:9:28.53:29,0,54	0/0:14,0:10:20.44:0,20,181	0/0:20,0:8:11.98:0,12,103	0/0:24,0:24:8.13:0,8,90	0/0:20,0:20:20.84:0,21,178	0/1:27,0:25:30.33:30,0,105	0/1:41,0:39:66.34:556,0,66	0/1:30,0:30:13.65:424,0,14	0/1:34,0:31:42.03:42,0,74	0/1:15,0:15:29.90:30,0,38	0/1:26,0:26:96.12:135,0,96	0/1:22,0:20:5.06:74,0,5	0/1:22,0:20:39.63:313,0,40	1/1:1,19:25:5.08:248,5,0	0/1:19,0:19:40.26:78,0,40	0/1:6,0:17:23.57:139,0,24	0/1:8,0:8:12.55:87,0,13	0/1:15,0:15:17.63:18,0,53	0/1:21,0:20:28.98:29,0,83	0/0:30,0:29:5.28:0,5,39	0/1:19,0:19:57.87:127,0,58	0/0:21,0:21:14.62:0,15,103	0/0:19,0:18:3.38:0,3,25	0/0:20,0:19:11.99:0,12,100	0/1:23,0:23:57.95:58,0,175	0/1:23,0:23:99:114,0,119	0/1:9,0:9:34.92:126,0,35
chr10	26670043	.	CT	C	16760.38	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=1.261;DP=544;FS=0.000;HRun=2;HaplotypeScore=57.5994;InbreedingCoeff=0.9950;MQ=75.99;MQ0=0;MQRankSum=-1.937;QD=36.51;ReadPosRankSum=4.293;VQSLOD=5.1623;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,25:25:69.22:895,69,0	1/1:0,15:15:45.15:584,45,0	0/0:17,0:17:51.17:0,51,739	0/0:6,0:6:18.05:0,18,242	1/1:0,24:24:69.22:896,69,0	1/1:0,21:21:63.20:817,63,0	1/1:0,8:8:21.07:273,21,0	0/0:26,0:26:75.24:0,75,1089	1/1:0,18:18:51.17:662,51,0	1/1:0,31:31:93.29:1192,93,0	1/1:0,30:30:90.29:1168,90,0	1/1:0,20:20:57.19:740,57,0	1/1:0,11:11:30.10:389,30,0	1/1:0,21:21:60.19:778,60,0	0/0:21,0:21:63.21:0,63,944	1/1:0,17:17:48.16:623,48,0	0/0:15,0:15:40.35:0,40,559	1/1:1,15:16:45.11:566,45,0	1/1:0,16:16:48.15:610,48,0	1/1:1,32:33:87.28:1129,87,0	1/1:0,8:8:18.06:234,18,0	1/1:1,24:25:63.20:818,63,0	1/1:0,30:30:81.09:1050,81,0	1/1:0,10:10:30.10:389,30,0	1/1:0,19:19:54.18:701,54,0	1/1:0,17:17:51.17:662,51,0	1/1:0,33:33:90.29:1168,90,0	1/1:0,11:11:33.09:413,33,0
chr10	26671089	.	CA	C	626.73	PASS	AB=0.871;AC=4;AF=0.071;AN=56;BaseQRankSum=5.789;DP=662;FS=1.984;HRun=10;HaplotypeScore=77.8784;InbreedingCoeff=0.4998;MQ=69.77;MQ0=0;MQRankSum=-0.040;QD=8.25;ReadPosRankSum=1.292;VQSLOD=2.3030;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:19,2:22:1.77:2,0,463	0/0:16,0:17:44.95:0,45,479	0/1:21,3:25:28.93:29,0,369	0/0:15,0:12:13.27:0,13,129	0/0:25,1:26:34.09:0,34,604	0/0:20,0:20:54.14:0,54,590	0/0:21,1:22:24.90:0,25,476	0/0:14,0:29:65.28:0,65,350	0/0:21,0:22:60:0,60,645	0/0:33,0:33:81.20:0,81,879	0/0:26,0:26:66.16:0,66,721	0/0:21,0:21:51.13:0,51,558	0/0:29,1:30:58.05:0,58,812	0/0:20,0:21:56.96:0,57,589	1/1:2,27:29:80.98:703,81,0	0/0:19,1:22:59.95:0,60,631	0/0:6,0:22:48.20:0,48,240	0/0:16,0:16:36.08:0,36,389	0/0:25,0:24:54.99:0,55,567	0/0:25,0:25:63.15:0,63,681	0/0:13,1:14:10.03:0,10,332	0/0:23,2:26:19.93:0,20,657	0/0:19,0:19:30.55:0,31,517	0/0:22,0:22:57.15:0,57,631	0/0:23,0:23:57.01:0,57,605	0/0:31,0:31:81.17:0,81,876	0/0:32,3:35:35.19:0,35,790	0/0:19,1:20:34.08:0,34,587
chr10	26671139	.	A	AAT	2535.82	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-9.767;DP=670;FS=1.777;HRun=0;HaplotypeScore=77.8661;InbreedingCoeff=0.9990;MQ=61.81;MQ0=5;MQRankSum=-3.590;QD=40.90;ReadPosRankSum=-2.417;VQSLOD=4.6054;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:69.15:0,69,894	0/0:16,0:16:48.12:0,48,636	0/0:23,0:15:39.05:0,39,483	0/0:15,0:12:33.05:0,33,405	0/0:26,0:26:72.21:0,72,958	0/0:28,0:28:81.27:0,81,1134	0/0:24,0:24:72.16:0,72,935	1/1:2,37:40:99:1953,114,0	0/0:16,0:16:45.15:0,45,628	0/0:35,0:35:93.29:0,93,1269	0/0:32,0:32:87.26:0,87,1171	0/0:18,0:18:54.17:0,54,739	0/0:28,0:28:84.27:0,84,1159	0/0:21,0:21:60.20:0,60,839	0/0:26,0:26:75.23:0,75,1031	0/0:21,0:21:60.18:0,60,792	1/1:5,17:21:26.17:704,26,0	0/0:14,0:14:36.12:0,36,504	0/0:23,0:21:60.19:0,60,825	0/0:33,0:33:96.31:0,96,1327	0/0:15,0:15:42.13:0,42,573	0/0:23,0:23:63.20:0,63,865	0/0:25,0:25:75.18:0,75,979	0/0:13,0:13:36.12:0,36,504	0/0:32,0:32:87.27:0,87,1185	0/0:30,0:30:87.28:0,87,1201	0/0:25,0:24:69.22:0,69,946	0/0:23,0:23:69.23:0,69,966
chr10	26671589	.	CA	C	11576.55	PASS	AB=0.962;AC=53;AF=0.946;AN=56;BaseQRankSum=-4.247;DP=626;FS=9.333;HRun=9;HaplotypeScore=72.7068;InbreedingCoeff=0.4898;MQ=66.76;MQ0=6;MQRankSum=1.698;QD=19.46;ReadPosRankSum=5.100;VQSLOD=4.7527;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,11:15:27.01:247,27,0	1/1:0,6:6:15.01:137,15,0	0/0:31,0:15:2.39:0,2,275	0/1:23,1:11:10.71:11,0,106	1/1:2,26:28:72.03:659,72,0	1/1:3,21:24:57.03:522,57,0	1/1:1,17:18:45.02:412,45,0	1/1:5,0:30:44.34:135,44,0	1/1:5,14:19:33.01:302,33,0	1/1:2,29:31:81.02:737,81,0	1/1:3,26:29:72.02:659,72,0	1/1:1,15:16:36.02:330,36,0	1/1:1,18:19:51.03:467,51,0	1/1:3,16:19:45.02:412,45,0	1/1:2,15:17:39.02:357,39,0	1/1:2,14:16:30.01:275,30,0	1/1:3,0:31:54.52:160,55,0	1/1:2,22:25:62.06:555,62,0	1/1:1,22:23:65.99:592,66,0	1/1:3,27:30:78.03:712,78,0	1/1:0,9:9:24.01:220,24,0	1/1:3,26:29:66.01:604,66,0	1/1:2,28:30:78.04:713,78,0	1/1:1,13:14:36.02:330,36,0	1/1:4,17:21:48.02:439,48,0	1/1:1,22:23:66.04:604,66,0	1/1:2,33:35:89.98:823,90,0	1/1:0,12:12:18.01:165,18,0
chr10	26672791	.	CAA	C	7214.88	PASS	AC=46;AF=0.852;AN=54;BaseQRankSum=-6.840;DP=347;FS=10.073;HRun=10;HaplotypeScore=91.2608;InbreedingCoeff=0.8180;MQ=69.92;MQ0=1;MQRankSum=-2.252;QD=26.62;ReadPosRankSum=3.110;VQSLOD=4.0656;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,5:7:18.05:200,18,0	1/1:0,9:9:27.05:291,27,0	0/0:20,0:13:25.42:0,25,183	0/0:23,0:16:4.22:0,4,63	1/1:3,19:22:57.14:635,57,0	1/1:1,11:13:35.83:380,36,0	1/1:1,11:12:33.08:367,33,0	1/1:10,12:22:45.09:485,45,0	1/1:0,4:4:12.03:134,12,0	0/0:4,0:18:39.80:0,40,136	0/0:3,0:13:27.92:0,28,106	1/1:1,7:8:21.05:234,21,0	1/1:1,10:11:30.08:334,30,0	1/1:1,6:7:15.03:167,15,0	1/1:1,0:7:5.38:19,5,0	1/1:2,9:11:27.07:301,27,0	1/1:3,8:11:25.51:298,26,0	1/1:5,10:15:24.05:326,24,0	1/1:2,5:7:15.03:167,15,0	1/1:1,17:17:51.14:568,51,0	./.	1/1:0,1:1:3.01:33,3,0	1/1:2,6:8:18.04:200,18,0	1/1:1,2:3:3.01:33,3,0	1/1:3,17:20:51.13:568,51,0	1/1:3,16:22:32.92:540,33,0	1/1:0,18:18:54.15:602,54,0	1/1:7,8:15:30.04:332,30,0
chr10	26672830	.	T	TA	9093.62	PASS	AB=1.000;AC=53;AF=0.946;AN=56;BaseQRankSum=0.034;DP=306;FS=15.859;HRun=6;HaplotypeScore=60.0676;InbreedingCoeff=0.4054;MQ=66.87;MQ0=0;MQRankSum=-3.798;QD=30.93;ReadPosRankSum=2.173;VQSLOD=3.8027;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,11:11:30.10:377,30,0	1/1:3,9:12:27.04:322,27,0	0/0:12,0:9:11.55:0,12,110	0/1:11,0:9:21.02:21,0,25	1/1:1,18:18:48.15:603,48,0	1/1:2,10:12:30.10:377,30,0	1/1:1,8:9:27.03:310,27,0	1/1:1,34:35:96.31:1208,96,0	1/1:1,3:4:9.03:113,9,0	1/1:4,8:12:27.09:338,27,0	1/1:2,12:14:36.12:453,36,0	1/1:0,8:8:24.08:302,24,0	1/1:1,10:11:30.10:377,30,0	1/1:0,8:8:24.08:302,24,0	1/1:0,6:6:18.02:210,18,0	1/1:1,4:5:12.04:151,12,0	1/1:1,8:9:24.08:302,24,0	1/1:4,9:13:24.06:288,24,0	1/1:0,10:10:30.10:377,30,0	1/1:0,13:13:39.12:490,39,0	1/1:0,2:2:3.01:38,3,0	1/1:0,1:1:3.01:38,3,0	1/1:0,6:6:15.05:189,15,0	1/1:1,2:3:3.01:38,3,0	1/1:3,15:18:45.14:566,45,0	1/1:4,18:22:57.17:705,57,0	1/1:6,6:12:27.09:338,27,0	1/1:1,7:8:21.07:264,21,0
chr10	26673478	.	G	GCACGTGTGCGTGCACA	30272.87	PASS	AB=0.707;AC=48;AF=0.857;AN=56;BaseQRankSum=-6.192;DP=731;FS=10.064;HRun=0;HaplotypeScore=260.1401;InbreedingCoeff=0.3381;MQ=42.37;MQ0=6;MQRankSum=-2.489;QD=44.52;ReadPosRankSum=2.794;VQSLOD=2.9298;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,10:37:2.30:621,2,0	1/1:3,3:9:9.03:479,9,0	0/0:21,0:7:18.53:0,19,504	0/0:30,0:13:17.88:0,18,420	1/1:7,14:26:2.37:13,2,0	1/1:5,10:24:8.25:680,8,0	1/1:8,9:24:9.50:369,10,0	1/1:41,0:39:57.33:3264,57,0	1/1:10,10:27:27.09:1700,27,0	1/1:10,17:34:75.20:3845,75,0	1/1:9,8:29:15.31:936,15,0	1/1:6,13:31:36.12:2388,36,0	1/1:7,19:34:51.17:3175,51,0	1/1:12,18:38:27.09:1878,27,0	1/1:22,0:40:3.95:38,4,0	1/1:5,8:20:10.49:669,10,0	0/1:20,0:20:75.60:1032,0,76	0/1:4,6:14:15.97:983,0,16	1/1:5,4:14:39.10:1811,39,0	1/1:4,9:29:7.89:697,8,0	0/1:16,9:34:0.03:0,0,0	1/1:6,2:19:2.41:234,2,0	0/1:8,8:26:7.10:7,0,44	1/1:7,6:19:2.74:12,3,0	1/1:6,13:26:4.19:457,4,0	1/1:3,11:22:48.63:2432,49,0	1/1:9,10:26:21.03:1135,21,0	1/1:5,7:16:24.08:1418,24,0
chr10	26673480	.	A	ACGTGTGCGTG	20037.55	PASS	AB=0.970;AC=32;AF=0.571;AN=56;BaseQRankSum=0.878;DP=711;FS=13.712;HRun=0;HaplotypeScore=258.1539;InbreedingCoeff=0.0203;MQ=42.31;MQ0=6;MQRankSum=-5.762;QD=36.83;ReadPosRankSum=6.893;VQSLOD=2.7549;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:34,0:34:80.43:374,0,80	0/1:8,0:8:34.20:327,0,34	0/0:22,0:8:18.53:0,19,505	0/0:32,0:14:17.93:0,18,414	0/1:26,0:26:3.64:4,0,16	1/1:23,0:23:8.97:375,9,0	0/1:25,0:25:28.60:196,0,29	0/1:38,4:38:99:2825,0,334	0/1:26,0:26:8.99:1024,0,9	1/1:35,0:36:29.42:2618,29,0	0/1:27,0:27:50.98:471,0,51	1/1:30,1:31:39.05:1516,39,0	1/1:34,1:34:36.72:2040,37,0	0/1:34,1:35:11.02:1140,0,11	0/0:36,0:36:3:0,3,48	1/1:18,0:18:14.03:434,14,0	0/1:13,6:19:99:917,0,269	0/1:13,0:13:64.71:526,0,65	0/1:12,0:12:48.64:1153,0,49	1/1:25,0:25:15.61:426,16,0	0/0:33,0:33:2.78:0,3,46	1/1:18,0:19:2.04:121,2,0	0/0:26,0:26:5.82:0,6,74	0/0:18,0:18:2.99:0,3,26	1/1:26,0:26:12.31:289,12,0	1/1:23,0:23:20.46:1527,20,0	1/1:25,0:25:20.96:749,21,0	0/1:16,0:16:14.80:988,0,15
chr10	26673961	.	GA	G	11802.14	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=8.837;DP=518;FS=0.000;HRun=6;HaplotypeScore=50.7439;InbreedingCoeff=0.9954;MQ=77.32;MQ0=0;MQRankSum=-3.589;QD=27.51;ReadPosRankSum=6.491;VQSLOD=4.2595;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,21:22:54.13:580,54,0	1/1:0,6:6:18.05:193,18,0	0/0:10,0:10:27.04:0,27,313	0/0:15,0:15:35.94:0,36,439	1/1:3,28:31:81.20:868,81,0	1/1:0,30:30:84.21:903,84,0	1/1:0,11:11:21.05:226,21,0	0/0:40,0:40:99:0,102,1316	1/1:0,12:12:36.09:387,36,0	1/1:3,21:24:63.16:677,63,0	1/1:1,22:23:63.16:675,63,0	1/1:0,13:13:33.08:355,33,0	1/1:3,15:18:39.09:419,39,0	1/1:1,16:17:42.11:451,42,0	0/0:13,0:13:39.13:0,39,513	1/1:1,12:13:29.97:322,30,0	0/0:11,0:11:33.11:0,33,430	1/1:1,12:13:30.08:322,30,0	1/1:2,22:24:66.11:683,66,0	1/1:3,24:27:69.17:741,69,0	1/1:2,16:18:45.11:484,45,0	1/1:1,12:13:36.09:387,36,0	1/1:3,11:14:30.07:323,30,0	1/1:2,9:11:21.05:226,21,0	1/1:0,22:22:60.15:645,60,0	1/1:2,19:21:57.14:612,57,0	1/1:1,23:24:60.15:645,60,0	1/1:0,22:22:63.16:677,63,0
chr10	26674942	.	CT	C	13277.45	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-5.281;DP=617;FS=17.060;HRun=9;HaplotypeScore=67.8137;InbreedingCoeff=0.9700;MQ=75.59;MQ0=0;MQRankSum=-6.315;QD=22.50;ReadPosRankSum=5.654;VQSLOD=3.7107;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,8:8:24.01:220,24,0	1/1:0,7:7:18.01:165,18,0	0/0:20,0:20:49.55:0,50,490	0/0:6,1:7:13.91:0,14,126	1/1:1,31:32:84.02:769,84,0	1/1:3,25:28:72.02:659,72,0	1/1:4,10:14:30.01:275,30,0	1/1:3,25:28:69:623,69,0	1/1:1,18:19:54.03:494,54,0	1/1:7,26:33:80.86:719,81,0	1/1:1,21:22:63.03:577,63,0	1/1:3,19:22:48.02:439,48,0	1/1:6,29:35:78.04:714,78,0	1/1:4,24:28:49.74:585,50,0	1/1:3,29:32:81.04:741,81,0	1/1:1,17:18:48.02:439,48,0	1/1:4,12:16:27:244,27,0	1/1:3,10:13:24.01:220,24,0	1/1:2,16:18:48.02:439,48,0	1/1:2,32:34:96.05:879,96,0	1/1:3,16:19:13.41:377,13,0	1/1:0,24:24:66.03:604,66,0	1/1:3,26:29:69.03:632,69,0	1/1:2,9:11:27.01:247,27,0	1/1:2,28:30:72.04:659,72,0	1/1:5,18:23:54.01:489,54,0	1/1:4,31:35:87.04:796,87,0	1/1:2,10:12:30.02:275,30,0
chr10	26677922	.	G	GA	923.92	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.911;DP=585;FS=0.000;HRun=6;HaplotypeScore=60.1693;InbreedingCoeff=0.9795;MQ=79.18;MQ0=0;MQRankSum=-2.416;QD=28.87;ReadPosRankSum=-0.018;VQSLOD=4.0220;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:45.10:0,45,459	0/0:7,0:7:15.03:0,15,153	0/0:19,0:19:41.46:0,41,392	0/0:11,0:12:21.50:0,22,206	0/0:27,0:27:75.14:0,75,752	0/0:30,0:30:78.17:0,78,795	0/0:18,0:18:50.93:0,51,491	0/0:25,0:25:60.12:0,60,607	0/0:13,0:13:39.04:0,39,372	0/0:25,0:25:72.15:0,72,726	0/0:20,0:20:54.12:0,54,550	0/0:21,0:21:63.13:0,63,636	0/0:24,0:24:66.13:0,66,666	0/0:17,0:17:48.08:0,48,475	1/1:3,29:32:81.26:1019,81,0	0/0:22,0:22:66.14:0,66,668	0/0:13,0:13:33.07:0,33,336	0/0:20,0:20:52.33:0,52,514	0/0:31,0:31:81.15:0,81,813	0/0:30,0:30:75.09:0,75,747	0/0:15,0:15:42.09:0,42,428	0/0:12,0:12:30.06:0,30,306	0/0:24,0:24:66.13:0,66,666	0/0:16,0:16:39.06:0,39,389	0/0:20,0:20:60.13:0,60,605	0/0:30,0:30:75.15:0,75,757	0/0:36,0:36:99:0,102,1015	0/0:11,0:11:30.07:0,30,306
chr10	26679648	.	G	GA	15427.61	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-7.516;DP=552;FS=20.586;HRun=6;HaplotypeScore=49.4766;InbreedingCoeff=0.9984;MQ=78.34;MQ0=0;MQRankSum=-6.773;QD=32.07;ReadPosRankSum=3.311;VQSLOD=3.0187;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,13:13:39.12:485,39,0	1/1:1,10:11:27.09:337,27,0	0/0:21,0:20:44.78:0,45,428	0/0:20,0:20:41.98:0,42,401	1/1:1,17:18:45.14:566,45,0	1/1:2,13:15:39.12:491,39,0	1/1:1,13:14:36.12:453,36,0	1/1:6,21:27:63.20:793,63,0	1/1:2,20:22:54.15:665,54,0	1/1:3,19:22:57.18:708,57,0	1/1:6,20:26:51.16:641,51,0	1/1:1,19:20:48.15:601,48,0	1/1:1,26:27:75.24:939,75,0	1/1:2,17:19:51.16:642,51,0	0/0:30,0:30:75.17:0,75,765	1/1:0,20:20:54.17:679,54,0	1/1:0,15:15:45.10:548,45,0	1/1:0,11:11:27.09:340,27,0	1/1:2,21:23:63.20:792,63,0	1/1:1,25:26:72.23:906,72,0	1/1:0,19:19:51.16:642,51,0	1/1:2,9:11:27.09:336,27,0	1/1:3,15:18:42.13:528,42,0	1/1:1,17:18:39.12:491,39,0	1/1:2,17:19:48.15:601,48,0	1/1:4,19:23:57.14:699,57,0	1/1:2,33:35:96.31:1207,96,0	1/1:0,9:9:27.09:340,27,0
chr10	26679935	.	G	GA	11311.74	PASS	AB=1.000;AC=51;AF=0.911;AN=56;BaseQRankSum=-5.920;DP=409;FS=1.947;HRun=8;HaplotypeScore=33.5448;InbreedingCoeff=0.7420;MQ=71.87;MQ0=0;MQRankSum=-1.984;QD=28.93;ReadPosRankSum=1.539;VQSLOD=4.8205;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,7:8:21.06:239,21,0	1/1:1,7:8:24.07:277,24,0	0/0:5,0:5:6:0,6,54	0/1:7,0:7:1.54:2,0,104	1/1:1,13:14:36.11:412,36,0	1/1:0,18:18:48.14:554,48,0	1/1:1,7:8:18.05:208,18,0	1/1:4,36:40:99:1246,108,0	1/1:0,12:12:33.10:381,33,0	1/1:1,19:19:54.15:623,54,0	1/1:4,20:24:57.13:643,57,0	1/1:0,18:18:45.13:519,45,0	1/1:2,13:15:33.10:381,33,0	1/1:2,15:17:36.11:415,36,0	0/0:13,0:13:33.01:0,33,302	1/1:1,17:19:53.99:603,54,0	1/1:5,15:20:45.13:519,45,0	1/1:0,2:2:3.01:35,3,0	1/1:2,16:18:48.07:508,48,0	1/1:2,16:18:23.68:526,24,0	1/1:0,9:9:27.08:312,27,0	1/1:0,3:3:9.03:104,9,0	1/1:1,14:15:42.12:485,42,0	1/1:2,8:10:24.07:277,24,0	1/1:2,5:7:12.04:138,12,0	1/1:1,21:21:57.17:658,57,0	1/1:1,27:28:75.22:865,75,0	1/1:0,11:11:33.10:381,33,0
chr10	26680266	.	TTGTGTGTG	T	1709.65	PASS	AB=0.992;AC=17;AF=0.304;AN=56;BaseQRankSum=11.046;DP=578;FS=14.581;HRun=0;HaplotypeScore=197.7485;InbreedingCoeff=-0.1182;MQ=64.57;MQ0=9;MQRankSum=-9.008;QD=5.44;ReadPosRankSum=-1.790;VQSLOD=1.4160;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:23.55:0,24,258	0/1:14,0:14:73.19:110,0,73	0/0:34,0:22:23.97:0,24,325	0/0:38,0:28:33.46:0,33,366	0/0:19,0:19:14.53:0,15,168	0/0:23,0:23:18.86:0,19,288	0/1:20,0:19:40.26:40,0,208	0/1:42,0:42:35.37:35,0,229	0/1:14,0:14:41.25:41,0,122	0/1:18,0:18:40.52:41,0,193	0/1:17,0:17:78.66:79,0,174	0/1:20,0:20:46.39:46,0,130	0/1:22,0:22:46.01:100,0,46	0/0:9,0:9:12.80:0,13,163	1/1:6,22:28:18.94:686,19,0	0/1:19,0:19:3.43:3,0,55	0/1:20,0:20:27.91:131,0,28	0/1:8,0:9:3.02:3,0,75	0/0:14,0:14:7.45:0,7,55	0/0:20,0:20:4.20:0,4,85	0/0:18,0:17:18.46:0,18,197	0/1:28,0:28:99:202,0,187	0/0:22,0:22:6.39:0,6,67	0/0:18,0:18:12.65:0,13,172	1/1:23,0:22:23.55:267,24,0	0/0:13,0:13:17.04:0,17,144	0/1:20,0:20:88.60:89,0,257	0/0:15,0:15:5.47:0,5,94
chr10	26680286	.	GTGTGTGTGTA	G	2205.99	PASS	AB=0.977;AC=20;AF=0.357;AN=56;BaseQRankSum=-3.829;DP=610;FS=2.801;HRun=0;HaplotypeScore=229.2555;InbreedingCoeff=-0.3842;MQ=50.50;MQ0=10;MQRankSum=2.034;QD=5.29;ReadPosRankSum=-4.909;VQSLOD=1.2196;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:30:41.65:42,0,398	0/1:11,0:11:42.77:108,0,43	0/0:34,0:15:15.13:0,15,294	0/0:40,0:21:4.07:0,4,215	0/0:18,0:18:27.20:0,27,203	0/1:20,0:20:13.34:13,0,226	0/1:20,0:19:37.79:38,0,202	1/1:12,21:33:50.14:789,50,0	0/1:20,0:20:62.82:63,0,179	0/1:20,0:20:91.52:92,0,92	0/1:25,0:25:82.86:99,0,83	0/1:24,0:24:50.13:50,0,196	0/1:20,0:20:92.28:92,0,97	0/0:12,0:11:19.81:0,20,242	0/1:27,0:27:99:146,0,137	0/0:18,0:18:10.02:0,10,42	0/1:7,19:26:3.12:269,0,3	0/1:9,0:8:3.23:3,0,89	0/0:8,0:8:8.09:0,8,38	0/0:25,0:25:8.43:0,8,37	0/1:21,0:19:44.87:45,0,164	0/1:22,0:22:99:108,0,112	0/0:25,0:25:9.31:0,9,42	0/1:24,0:24:67.24:67,0,120	0/1:28,0:26:11.50:167,0,11	0/1:17,0:17:42.15:42,0,152	0/1:20,0:19:99:134,0,208	0/0:13,0:13:8.38:0,8,32
chr10	26680294	.	GTA	G	7648.39	PASS	AB=1.000;AC=51;AF=0.911;AN=56;BaseQRankSum=2.119;DP=585;FS=0.000;HRun=0;HaplotypeScore=148.9119;InbreedingCoeff=0.6946;MQ=50.35;MQ0=9;MQRankSum=0.891;QD=14.57;ReadPosRankSum=0.506;VQSLOD=4.4264;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:30,3:33:58.22:511,58,0	1/1:3,8:11:26.98:251,27,0	0/0:33,0:13:9.68:0,10,172	0/1:38,0:18:27.61:28,0,189	1/1:14,3:17:38.94:347,39,0	1/1:12,7:19:35.72:362,36,0	1/1:17,5:21:35.72:389,36,0	1/1:24,0:24:55.67:431,56,0	1/1:12,7:19:44.75:380,45,0	1/1:0,21:21:55.94:466,56,0	1/1:17,7:24:53.79:455,54,0	1/1:18,6:24:49.61:426,50,0	1/1:13,8:21:46.83:394,47,0	1/1:7,5:11:23.96:199,24,0	0/0:27,0:27:21.98:0,22,121	1/1:0,16:16:18.51:199,19,0	1/1:22,0:22:10.22:100,10,0	1/1:7,2:8:17.55:123,18,0	1/1:5,1:6:14.83:111,15,0	1/1:0,24:24:11.94:107,12,0	1/1:17,1:16:26.44:198,26,0	1/1:17,7:24:56.51:490,57,0	1/1:2,23:25:11.13:117,11,0	1/1:19,4:23:32.54:277,33,0	1/1:0,29:29:36.02:357,36,0	1/1:0,16:16:44.04:348,44,0	1/1:9,9:17:32.44:454,32,0	1/1:0,10:10:12.03:131,12,0
chr10	26680302	.	GTGTGTC	G	8487.79	PASS	AB=1.000;AC=46;AF=0.821;AN=56;BaseQRankSum=2.815;DP=576;FS=4.562;HRun=0;HaplotypeScore=179.9906;InbreedingCoeff=0.6892;MQ=55.30;MQ0=6;MQRankSum=-3.670;QD=18.82;ReadPosRankSum=4.210;VQSLOD=3.9854;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:28:35.78:401,36,0	1/1:10,1:11:20.52:379,21,0	0/0:32,0:16:39.59:0,40,782	0/0:38,0:19:46.76:0,47,1038	1/1:15,0:15:22.48:261,22,0	0/1:20,0:20:0.98:444,0,1	1/1:23,1:23:25.69:384,26,0	0/0:28,0:28:64.52:0,65,632	1/1:18,0:18:35.75:452,36,0	1/1:18,1:19:32.87:425,33,0	1/1:19,2:21:46.63:474,47,0	1/1:24,1:25:45.75:588,46,0	1/1:19,1:20:43.17:642,43,0	1/1:12,0:11:20.87:166,21,0	0/0:27,0:27:33.80:0,34,482	1/1:20,0:20:21.67:404,22,0	0/1:24,0:24:35.10:40,0,35	1/1:9,0:8:8.85:103,9,0	1/1:7,0:7:7.47:94,7,0	1/1:21,0:21:12.04:236,12,0	1/1:17,0:16:1.45:127,1,0	1/1:20,3:23:25.88:549,26,0	1/1:24,0:24:11.99:234,12,0	1/1:22,0:22:8.81:267,9,0	1/1:25,3:26:36.12:741,36,0	1/1:13,0:13:22.97:221,23,0	1/1:18,1:18:8.52:638,9,0	1/1:11,0:11:12.92:218,13,0
chr10	26680304	.	GTGTC	G	6603.19	PASS	AB=1.000;AC=47;AF=0.839;AN=56;BaseQRankSum=4.759;DP=570;FS=1.693;HRun=0;HaplotypeScore=172.3955;InbreedingCoeff=0.8110;MQ=56.87;MQ0=5;MQRankSum=-3.710;QD=14.84;ReadPosRankSum=3.668;VQSLOD=4.3091;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:25,3:28:53.81:437,54,0	1/1:5,5:10:18.06:242,18,0	0/0:30,0:15:31.04:0,31,613	0/0:40,0:22:46.28:0,46,943	1/1:10,3:13:20.54:173,21,0	1/1:16,4:20:35.82:370,36,0	1/1:21,3:23:39.36:373,39,0	0/0:28,0:28:56.88:0,57,558	1/1:12,6:18:30.84:310,31,0	1/1:14,3:17:32.95:327,33,0	1/1:19,4:23:47.64:415,48,0	1/1:20,5:25:42.19:392,42,0	1/1:14,6:20:44.11:472,44,0	1/1:11,1:11:24.03:318,24,0	0/0:27,0:27:49.81:0,50,580	1/1:14,6:20:25.39:275,25,0	0/1:25,0:25:9.96:10,0,47	1/1:6,2:7:6.46:64,6,0	1/1:6,1:7:5.46:63,5,0	1/1:17,5:22:14.97:160,15,0	1/1:17,0:16:20.88:170,21,0	1/1:21,2:23:37.98:407,38,0	1/1:15,8:23:15.02:161,15,0	1/1:17,3:20:27.90:227,28,0	1/1:19,9:27:36.12:476,36,0	1/1:10,1:11:22.95:182,23,0	1/1:14,6:19:44.83:457,45,0	1/1:8,3:11:9.97:125,10,0
chr10	26680306	.	GTC	G	5867.07	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=5.156;DP=570;FS=2.189;HRun=0;HaplotypeScore=161.5161;InbreedingCoeff=0.8912;MQ=58.93;MQ0=3;MQRankSum=-2.595;QD=13.94;ReadPosRankSum=3.279;VQSLOD=4.7810;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:27:51.71:408,52,0	1/1:10,0:10:21.01:191,21,0	0/0:28,0:14:24.03:0,24,519	0/0:39,0:23:44.68:0,45,874	1/1:13,0:13:25.29:201,25,0	1/1:20,1:21:39.30:290,39,0	1/1:24,1:24:39.23:349,39,0	0/0:30,0:30:62.79:0,63,576	1/1:17,0:17:32.28:250,32,0	1/1:18,0:18:41.91:366,42,0	1/1:23,0:23:48.20:394,48,0	1/1:26,0:26:50.76:403,51,0	1/1:20,0:21:46.78:391,47,0	1/1:10,4:13:29.94:245,30,0	0/0:28,0:28:57.08:0,57,704	1/1:20,0:20:27.59:229,28,0	0/0:24,0:24:0.80:0,1,38	1/1:8,0:7:6.43:50,6,0	1/1:7,0:7:9.10:81,9,0	1/1:22,0:22:17.92:147,18,0	1/1:16,0:15:21.43:171,21,0	1/1:22,0:22:49.51:365,50,0	1/1:24,0:24:17.71:152,18,0	1/1:18,1:19:29:216,29,0	1/1:26,0:24:36.04:342,36,0	1/1:9,0:9:22.94:170,23,0	1/1:21,0:20:28.40:362,28,0	1/1:12,0:12:10.78:93,11,0
chr10	26681276	.	CTTT	C	6912.36	PASS	AB=0.556;AC=47;AF=0.839;AN=56;BaseQRankSum=-9.809;DP=381;FS=2.721;HRun=14;HaplotypeScore=62.1774;InbreedingCoeff=0.8301;MQ=71.05;MQ0=2;MQRankSum=-1.607;QD=21.40;ReadPosRankSum=5.755;VQSLOD=3.7796;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,17:20:39.02:439,39,0	1/1:0,9:9:27.08:316,27,0	0/0:14,0:10:14.99:0,15,177	0/0:13,0:8:17.67:0,18,217	1/1:3,16:19:38.93:456,39,0	1/1:4,11:15:18.92:212,19,0	1/1:4,8:12:18.01:210,18,0	0/1:6,1:30:3.40:3,0,30	1/1:1,5:6:15.04:175,15,0	1/1:4,14:18:42.06:488,42,0	1/1:2,11:13:23.95:280,24,0	1/1:2,4:7:10.58:138,11,0	1/1:1,8:9:18.05:210,18,0	1/1:1,8:9:18.05:210,18,0	0/0:1,0:12:8.72:0,9,19	1/1:1,14:15:39.09:455,39,0	0/0:3,0:19:19.19:0,19,58	1/1:1,7:8:21.06:246,21,0	1/1:7,15:22:43.65:512,44,0	1/1:3,16:21:44.87:491,45,0	1/1:2,4:6:12.01:140,12,0	1/1:1,5:6:5.95:70,6,0	1/1:1,8:10:24:264,24,0	1/1:1,7:8:21.05:245,21,0	1/1:4,12:18:32.86:351,33,0	1/1:0,11:11:33.10:386,33,0	1/1:6,17:24:38.93:438,39,0	1/1:0,7:7:15.04:175,15,0
chr10	26681738	.	A	AT	15406.60	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-12.334;DP=556;FS=1.405;HRun=5;HaplotypeScore=46.5889;InbreedingCoeff=0.9969;MQ=83.85;MQ0=0;MQRankSum=-3.459;QD=34.24;ReadPosRankSum=6.719;VQSLOD=4.0813;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,7:7:18.06:237,18,0	1/1:0,10:10:27.09:355,27,0	0/0:22,0:22:57.12:0,57,599	0/0:11,0:11:24.06:0,24,257	1/1:3,22:25:63.20:827,63,0	1/1:4,25:29:69.22:908,69,0	1/1:1,14:15:39.13:513,39,0	0/0:33,0:33:87.20:0,87,921	1/1:0,19:19:48.16:632,48,0	1/1:5,28:33:84.27:1103,84,0	1/1:2,17:19:45.15:592,45,0	1/1:0,19:19:48.16:632,48,0	1/1:0,14:14:39.13:513,39,0	1/1:1,16:17:45.15:592,45,0	0/0:22,0:22:57.14:0,57,613	1/1:2,15:17:45.15:590,45,0	0/0:18,0:18:45.11:0,45,483	1/1:0,10:10:30.10:395,30,0	1/1:0,23:23:69.22:908,69,0	1/1:0,36:36:99:1382,105,0	1/1:1,19:20:51.17:671,51,0	1/1:2,9:11:27.04:333,27,0	1/1:3,18:21:44.92:592,45,0	1/1:1,10:11:30.10:395,30,0	1/1:1,24:25:66.21:869,66,0	1/1:3,22:25:66.21:869,66,0	1/1:3,24:27:72.23:947,72,0	1/1:1,16:17:42.14:553,42,0
chr10	26682425	.	A	AATAT	3072.84	PASS	AC=42;AF=0.875;AN=48;BaseQRankSum=-0.187;DP=215;FS=3.153;HRun=0;HaplotypeScore=47.1234;InbreedingCoeff=0.3687;MQ=74.89;MQ0=0;MQRankSum=-4.312;QD=18.40;ReadPosRankSum=-1.020;VQSLOD=2.8644;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,0:5:6.02:121,6,0	1/1:0,0:5:6.02:106,6,0	0/0:5,0:5:6.01:0,6,67	0/0:9,0:8:9.01:0,9,109	./.	1/1:9,0:8:6:74,6,0	1/1:1,0:1:2.99:24,3,0	1/1:17,18:39:66.01:1170,66,0	1/1:2,0:5:6.02:105,6,0	1/1:5,0:5:9.01:94,9,0	./.	1/1:2,0:5:3.01:53,3,0	1/1:2,0:2:2.99:24,3,0	1/1:2,0:5:3.01:53,3,0	0/0:27,0:27:63.18:0,63,1021	1/1:2,0:4:3.01:53,3,0	1/1:6,12:19:26.69:613,27,0	1/1:2,0:6:3.01:53,3,0	1/1:6,0:6:3:26,3,0	1/1:3,0:10:3.01:53,3,0	1/1:3,0:3:2.99:24,3,0	./.	1/1:3,0:4:3.01:52,3,0	./.	1/1:2,0:8:6.02:106,6,0	1/1:4,0:4:6.01:80,6,0	1/1:5,0:14:6.02:106,6,0	1/1:2,0:8:12.04:211,12,0
chr10	26682673	.	T	TC	20960.98	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-9.317;DP=524;FS=0.000;HRun=0;HaplotypeScore=46.2707;InbreedingCoeff=0.9140;MQ=93.51;MQ0=0;MQRankSum=-11.378;QD=44.13;ReadPosRankSum=6.952;VQSLOD=3.9350;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,22:22:66.23:1053,66,0	1/1:1,0:1:3:25,3,0	0/0:30,0:30:87.18:0,87,1086	0/0:19,0:19:55.20:0,55,697	1/1:0,14:14:39.13:623,39,0	1/1:1,19:20:54.18:863,54,0	1/1:1,8:9:21.06:336,21,0	1/1:2,38:40:99:1844,117,0	1/1:0,17:17:48.16:767,48,0	1/1:0,20:20:60.20:959,60,0	1/1:0,17:17:48.16:767,48,0	1/1:1,21:22:60.20:959,60,0	1/1:0,27:27:78.27:1245,78,0	1/1:0,15:15:42.14:670,42,0	1/1:0,20:20:57.19:911,57,0	1/1:0,25:25:66.23:1055,66,0	1/1:0,9:9:27.09:430,27,0	1/1:1,11:12:30.10:478,30,0	1/1:0,17:17:51.16:787,51,0	1/1:1,15:16:36.12:575,36,0	1/1:0,22:22:54.18:863,54,0	1/1:0,18:18:48.16:767,48,0	1/1:0,13:13:36.12:575,36,0	1/1:0,15:15:45.15:719,45,0	1/1:0,19:18:54.18:862,54,0	1/1:0,18:18:54.15:816,54,0	1/1:1,23:24:63.21:1007,63,0	1/1:0,23:23:63.21:1004,63,0
chr10	26682718	.	CCCATTACTCACCAGGATTCCCACAG	C	1442.25	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.311;DP=534;FS=2.814;HRun=0;HaplotypeScore=359.4829;InbreedingCoeff=0.9564;MQ=102.47;MQ0=0;MQRankSum=-4.287;QD=131.11;ReadPosRankSum=-0.306;VQSLOD=2.3551;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:57.20:0,57,6235	0/0:5,0:5:15.05:0,15,1796	0/0:36,0:36:99:0,108,7681	0/0:27,0:27:78.21:0,78,5303	0/0:18,0:18:54.19:0,54,6325	0/0:27,0:27:81.28:0,81,8222	0/0:17,0:17:48.16:0,48,4947	1/1:0,7:7:21.06:1116,21,0	0/0:25,0:25:72.25:0,72,7582	0/0:24,0:24:72.24:0,72,7611	0/0:17,0:17:51.18:0,51,4288	0/0:26,0:26:75.26:0,75,8256	0/0:23,0:23:69.24:0,69,7001	0/0:22,0:22:66.23:0,66,7132	0/0:26,0:26:78.27:0,78,8478	0/0:24,0:24:66.21:0,66,6893	1/1:0,4:4:8.99:439,9,0	0/0:7,0:7:21.07:0,21,2240	0/0:20,0:20:60.21:0,60,5395	0/0:19,0:19:57.20:0,57,6178	0/0:15,0:15:42.14:0,42,4386	0/0:13,0:13:39.12:0,39,3342	0/0:19,0:19:51.18:0,51,5910	0/0:16,0:16:48.16:0,48,5060	0/0:13,0:13:33.11:0,33,3616	0/0:19,0:19:57.20:0,57,6151	0/0:32,0:32:92.95:0,93,9109	0/0:13,0:13:36.12:0,36,4284
chr10	26684869	.	AGTGTGT	A	440.84	PASS	AC=4;AF=0.080;AN=50;BaseQRankSum=1.710;DP=649;FS=0.000;HRun=0;HaplotypeScore=127.7320;InbreedingCoeff=0.6438;MQ=62.12;MQ0=6;MQRankSum=-4.860;QD=9.38;ReadPosRankSum=1.559;VQSLOD=2.2779;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:24:8.97:0,9,70	0/0:6,0:6:6.01:0,6,102	./.	./.	0/0:16,0:26:14.08:0,14,298	0/0:12,0:21:9:0,9,241	0/0:12,0:24:21.07:0,21,518	./.	0/0:21,0:25:30.10:0,30,846	0/0:26,0:25:24.08:0,24,670	0/0:10,0:10:18.04:0,18,475	0/0:20,0:30:13.86:0,14,328	0/0:9,0:15:6.02:0,6,168	0/0:17,0:33:8.56:0,9,235	1/1:13,13:26:21.52:426,22,0	0/0:17,0:36:24.06:0,24,533	1/1:11,0:20:9.03:126,9,0	0/0:6,0:12:7.58:0,8,161	0/0:20,0:20:15.05:0,15,385	0/0:18,0:30:18.85:0,19,391	0/0:16,0:27:3.01:0,3,78	0/0:25,0:26:16.12:0,16,371	0/0:15,0:15:11.98:0,12,141	0/0:9,0:23:12.04:0,12,310	0/0:7,0:27:15.02:0,15,245	0/0:33,0:33:52.72:0,53,1273	0/0:18,0:29:18.06:0,18,403	0/0:9,0:7:12.04:0,12,280
chr10	26686435	.	TACA	T	17517.50	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=4.600;DP=484;FS=3.697;HRun=0;HaplotypeScore=78.7351;InbreedingCoeff=0.8966;MQ=62.44;MQ0=0;MQRankSum=-4.786;QD=40.64;ReadPosRankSum=4.218;VQSLOD=6.1186;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,14:14:30.10:488,30,0	1/1:0,9:9:21.07:341,21,0	0/0:19,0:19:50.76:0,51,1021	0/0:6,0:4:9.03:0,9,148	1/1:2,31:33:75.12:1136,75,0	1/1:0,19:19:45.15:734,45,0	1/1:0,9:9:24.08:391,24,0	1/1:0,24:24:72.23:1142,72,0	1/1:1,5:6:12.04:185,12,0	1/1:0,28:28:81.28:1322,81,0	1/1:1,20:21:60.20:954,60,0	1/1:1,9:10:24.08:392,24,0	1/1:0,22:22:63.22:1029,63,0	1/1:2,12:14:27.09:441,27,0	0/0:28,0:28:72.23:0,72,1511	1/1:0,13:13:33.11:539,33,0	1/1:0,19:19:48.16:783,48,0	1/1:0,4:4:12.04:196,12,0	1/1:2,20:22:60.19:937,60,0	1/1:1,36:37:99:1603,102,0	1/1:1,12:13:33.11:539,33,0	1/1:1,12:13:33.07:507,33,0	1/1:0,21:21:51.17:832,51,0	1/1:3,13:16:32.59:538,33,0	1/1:0,22:22:51.17:831,51,0	1/1:2,15:17:45.12:679,45,0	1/1:2,21:23:57.19:930,57,0	1/1:0,2:2:3.01:49,3,0
chr10	26686545	.	AT	A	543.89	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=-5.961;DP=564;FS=2.702;HRun=9;HaplotypeScore=107.2634;InbreedingCoeff=0.6478;MQ=74.12;MQ0=2;MQRankSum=-0.682;QD=13.95;ReadPosRankSum=1.032;VQSLOD=3.6477;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:24:57.03:0,57,296	0/0:1,0:6:14.32:0,14,76	0/1:11,0:11:6:6,0,144	0/0:13,0:12:13.64:0,14,117	0/0:9,0:25:63.24:0,63,357	0/0:4,0:19:42.93:0,43,239	0/0:3,0:18:37.20:0,37,203	0/0:29,0:29:78.21:0,78,883	0/0:2,0:18:45.77:0,46,255	0/0:10,0:24:57.35:0,57,329	0/0:2,0:22:56.82:0,57,289	0/0:2,0:15:39.77:0,40,201	0/0:1,0:26:62.53:0,63,317	0/0:2,0:17:42.77:0,43,228	1/1:2,26:28:71.07:638,71,0	0/0:0,0:21:53.97:0,54,274	0/0:24,0:24:54.15:0,54,615	0/0:5,0:15:34.37:0,34,187	0/0:4,0:18:42.33:0,42,218	0/0:8,0:44:97.11:0,97,514	0/0:2,0:16:42.77:0,43,228	0/0:2,0:16:37.12:0,37,194	0/0:2,0:24:54.06:0,54,277	0/0:1,0:17:34.24:0,34,184	0/0:3,0:16:25.69:0,26,135	0/0:4,0:23:54.34:0,54,290	0/0:4,0:26:51.49:0,51,278	0/0:1,0:6:8.67:0,9,52
chr10	26687277	.	G	GTT	8722.52	PASS	AB=1.000;AC=53;AF=0.946;AN=56;BaseQRankSum=-0.001;DP=581;FS=5.104;HRun=11;HaplotypeScore=115.3828;InbreedingCoeff=0.4881;MQ=71.40;MQ0=0;MQRankSum=-3.303;QD=15.38;ReadPosRankSum=2.044;VQSLOD=3.6541;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:27:46.39:342,46,0	1/1:3,0:3:3:26,3,0	0/0:13,0:11:8.07:0,8,49	0/1:18,0:20:16.74:17,0,58	1/1:26,0:26:53.97:464,54,0	1/1:29,0:29:65.46:552,65,0	1/1:18,0:18:23.87:198,24,0	1/1:16,0:37:69.01:657,69,0	1/1:21,0:21:32.99:288,33,0	1/1:23,0:23:46.06:371,46,0	1/1:16,0:16:40.25:362,40,0	1/1:17,0:18:33:261,33,0	1/1:19,0:19:20.48:165,20,0	1/1:17,0:18:35.71:284,36,0	1/1:1,21:25:57.07:741,57,0	1/1:25,0:25:27.66:347,28,0	1/1:4,0:17:21.04:213,21,0	1/1:9,0:9:14.99:130,15,0	1/1:21,0:21:36:316,36,0	1/1:27,0:27:65.39:543,65,0	1/1:21,0:21:29.76:224,30,0	1/1:22,0:22:41.44:340,41,0	1/1:17,0:17:20.50:170,20,0	1/1:11,0:11:9.43:136,9,0	1/1:33,0:33:63.80:524,64,0	1/1:25,0:25:59.95:514,60,0	1/1:30,0:29:44.56:481,45,0	1/1:4,0:7:15.40:58,15,0
chr10	26687286	.	T	TTTTTC	16159.80	PASS	AB=1.000;AC=50;AF=0.893;AN=56;BaseQRankSum=-0.193;DP=631;FS=9.539;HRun=0;HaplotypeScore=140.0960;InbreedingCoeff=0.2744;MQ=70.29;MQ0=0;MQRankSum=-3.578;QD=26.11;ReadPosRankSum=4.015;VQSLOD=3.8382;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,0:36:54.49:801,54,0	1/1:0,0:1:3.01:53,3,0	0/0:12,0:9:11.23:0,11,113	0/1:16,0:16:6.43:6,0,92	1/1:2,0:27:65.84:958,66,0	1/1:0,0:32:65.71:1081,66,0	1/1:0,0:17:24.08:400,24,0	0/1:35,0:34:64.63:403,0,65	1/1:3,0:21:30.51:516,31,0	1/1:6,0:30:75.20:913,75,0	1/1:1,3:17:47.64:821,48,0	1/1:7,0:20:30.94:458,31,0	1/1:4,1:20:29.03:413,29,0	1/1:4,0:24:35.98:541,36,0	0/1:27,0:27:30.32:82,0,30	1/1:6,0:28:55.75:851,56,0	0/1:18,0:18:4.88:110,0,5	1/1:0,1:11:15.02:268,15,0	1/1:3,1:22:57.13:1028,57,0	1/1:3,0:30:76.92:1124,77,0	1/1:3,0:20:30.06:465,30,0	1/1:4,0:27:55.35:713,55,0	1/1:3,0:19:26.94:372,27,0	1/1:2,0:16:15.94:291,16,0	1/1:4,2:32:67.64:1073,68,0	1/1:3,2:30:80.96:1170,81,0	1/1:4,0:33:71.28:1091,71,0	1/1:6,0:9:24.47:157,24,0
chr10	26688248	.	T	TA	9597.14	PASS	AC=46;AF=0.885;AN=52;BaseQRankSum=-5.966;DP=292;FS=0.000;HRun=5;HaplotypeScore=23.5573;InbreedingCoeff=0.8288;MQ=72.48;MQ0=0;MQRankSum=-3.935;QD=35.41;ReadPosRankSum=1.233;VQSLOD=3.8729;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,17:18:51.17:671,51,0	./.	0/0:6,0:5:13.84:0,14,129	0/0:4,0:4:12.03:0,12,124	1/1:0,21:21:63.16:809,63,0	1/1:4,14:18:36.12:474,36,0	1/1:1,6:7:15.05:197,15,0	1/1:2,33:35:99:1242,99,0	1/1:0,4:4:12.04:158,12,0	1/1:2,11:13:33.11:434,33,0	1/1:1,12:13:36.07:454,36,0	1/1:0,4:4:12.04:158,12,0	1/1:0,6:6:15.05:197,15,0	1/1:0,5:5:15.05:197,15,0	0/0:9,0:9:27.05:0,27,282	1/1:0,1:1:3.01:39,3,0	1/1:0,12:12:36.12:474,36,0	1/1:0,14:14:33.11:434,33,0	1/1:1,23:24:69.22:908,69,0	1/1:0,10:10:30.10:395,30,0	1/1:0,7:7:18.06:237,18,0	./.	1/1:0,7:7:18.06:237,18,0	1/1:0,1:1:3.01:39,3,0	1/1:0,9:9:27.09:355,27,0	1/1:2,14:16:42.13:539,42,0	1/1:1,16:17:45.15:592,45,0	1/1:0,9:9:27.09:355,27,0
chr10	26688535	.	TG	T	4561.07	PASS	AB=0.974;AC=53;AF=0.946;AN=56;BaseQRankSum=-2.607;DP=450;FS=8.673;HRun=5;HaplotypeScore=77.5620;InbreedingCoeff=0.6267;MQ=82.94;MQ0=0;MQRankSum=-2.176;QD=10.63;ReadPosRankSum=3.580;VQSLOD=1.9009;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:23:35.95:232,36,0	1/1:7,1:8:17.37:114,17,0	0/1:37,1:25:1.61:2,0,309	0/0:20,0:17:13.94:0,14,161	1/1:17,0:17:24.35:147,24,0	1/1:20,0:20:28.43:162,28,0	1/1:11,2:13:24.36:189,24,0	1/1:7,28:36:79.87:808,80,0	1/1:8,0:8:15.23:75,15,0	1/1:18,0:18:36.81:256,37,0	1/1:6,0:6:7.72:40,8,0	1/1:11,0:11:17.88:96,18,0	1/1:9,1:10:8.72:62,9,0	1/1:9,0:9:15.11:96,15,0	1/1:4,7:11:33.02:323,33,0	1/1:13,0:12:17.61:85,18,0	1/1:3,17:20:31.54:336,32,0	1/1:13,3:16:16.45:175,16,0	1/1:18,1:19:34.99:265,35,0	1/1:12,0:12:20.23:136,20,0	1/1:18,0:18:18.54:132,19,0	1/1:10,0:10:13.59:62,14,0	1/1:7,0:7:10.81:83,11,0	1/1:31,1:32:41.15:206,41,0	1/1:7,2:9:17.93:116,18,0	1/1:20,0:20:25.60:167,26,0	1/1:15,0:15:5.79:106,6,0	1/1:10,0:10:13.82:90,14,0
chr10	26688539	.	G	GA	2217.45	PASS	AB=0.709;AC=31;AF=0.554;AN=56;BaseQRankSum=1.778;DP=482;FS=0.430;HRun=0;HaplotypeScore=92.3968;InbreedingCoeff=-0.1948;MQ=85.46;MQ0=0;MQRankSum=-0.480;QD=6.28;ReadPosRankSum=4.387;VQSLOD=3.5143;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:15,9:25:55.30:232,0,55	1/1:3,6:9:11.55:92,12,0	0/0:43,0:29:17.12:0,17,468	0/0:23,0:20:22.18:0,22,251	0/1:9,8:17:32.64:144,0,33	0/1:5,14:21:21.85:142,0,22	0/1:9,3:12:30.69:74,0,31	0/0:39,0:39:74.35:0,74,387	1/1:1,0:9:11.44:53,11,0	1/1:11,5:17:0.18:133,0,0	0/1:5,1:6:11.11:33,0,11	1/1:4,6:10:4.06:69,4,0	0/1:4,2:13:4.85:5,0,13	1/1:4,7:11:0.99:46,1,0	0/1:11,0:12:1.69:2,0,48	0/1:3,10:14:5.13:122,0,5	0/0:21,0:22:34.71:0,35,157	0/1:14,2:16:22.64:111,0,23	0/1:11,11:23:6.38:157,0,6	0/1:6,2:12:16.40:27,0,16	0/1:5,14:19:11.41:152,0,11	0/1:6,2:10:32.04:66,0,32	0/1:5,2:7:13.51:17,0,14	1/1:6,26:32:19.85:288,20,0	0/1:6,5:11:26.03:53,0,26	0/1:8,10:20:0.94:129,0,1	0/1:9,6:16:48.74:93,0,49	1/1:3,5:10:13.79:142,14,0
chr10	26688595	.	CA	C	697.01	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-4.205;DP=527;FS=0.849;HRun=4;HaplotypeScore=87.6012;InbreedingCoeff=0.8961;MQ=79.54;MQ0=0;MQRankSum=-1.670;QD=31.68;ReadPosRankSum=1.033;VQSLOD=4.0146;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:72.24:0,72,1008	0/0:4,0:4:6.02:0,6,84	0/0:13,0:13:26.89:0,27,305	0/0:14,0:14:27.04:0,27,313	0/0:20,0:20:60.19:0,60,822	0/0:23,0:23:48.15:0,48,656	0/0:19,0:19:54.18:0,54,756	0/0:39,0:39:99:0,111,1541	0/0:20,0:20:57.19:0,57,797	0/0:21,0:21:63.20:0,63,857	0/0:16,0:16:48.15:0,48,656	0/0:18,0:18:51.17:0,51,714	0/0:20,0:20:48.16:0,48,671	0/0:18,0:18:48.16:0,48,671	1/1:0,22:22:66.20:792,66,0	0/0:28,0:27:84.18:0,84,1111	0/0:24,0:24:66.22:0,66,922	0/0:9,0:9:27.05:0,27,356	0/0:22,0:22:57.18:0,57,782	0/0:17,0:17:51.16:0,51,694	0/0:20,0:20:54.18:0,54,754	0/0:14,0:14:42.14:0,42,588	0/0:7,0:7:21.07:0,21,294	0/0:26,0:26:66.22:0,66,924	0/0:18,0:18:45.15:0,45,630	0/0:24,0:24:72.24:0,72,1000	0/0:18,0:17:48.14:0,48,654	0/0:7,0:7:21.07:0,21,294
chr10	26689658	.	G	GA	1937.59	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.269;DP=608;FS=2.532;HRun=4;HaplotypeScore=61.7533;InbreedingCoeff=0.9424;MQ=74.12;MQ0=0;MQRankSum=-4.338;QD=35.23;ReadPosRankSum=-2.251;VQSLOD=3.3379;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:57.16:0,57,646	0/0:7,0:7:21.06:0,21,238	0/0:12,0:11:30.08:0,30,329	0/0:12,0:12:33.06:0,33,360	0/0:33,0:33:96.26:0,96,1078	0/0:31,0:31:84.24:0,84,952	0/0:20,0:20:60.16:0,60,671	1/1:4,25:29:81.21:1056,81,0	0/0:32,0:32:96.27:0,96,1089	0/0:29,0:29:81.22:0,81,912	0/0:21,0:21:63.18:0,63,713	0/0:16,0:16:48.14:0,48,544	0/0:36,0:36:99:0,102,1156	0/0:23,0:23:63.18:0,63,715	0/0:29,0:29:84.23:0,84,945	0/0:19,0:19:54.15:0,54,612	1/1:1,25:26:75.19:1004,75,0	0/0:16,0:16:42.10:0,42,465	0/0:19,0:19:48.07:0,48,512	0/0:29,0:29:84.24:0,84,952	0/0:15,0:15:39.11:0,39,442	0/0:27,0:27:75.20:0,75,840	0/0:22,0:22:63.18:0,63,714	0/0:6,0:6:18.05:0,18,204	0/0:21,0:21:60.16:0,60,670	0/0:33,0:33:96.26:0,96,1079	0/0:21,0:21:63.18:0,63,714	0/0:3,0:3:6.02:0,6,68
chr10	26690343	.	GTTT	G	5672.67	PASS	AB=0.750;AC=46;AF=0.821;AN=56;BaseQRankSum=-7.829;DP=317;FS=24.279;HRun=12;HaplotypeScore=56.3050;InbreedingCoeff=0.6342;MQ=72.02;MQ0=1;MQRankSum=-3.723;QD=22.33;ReadPosRankSum=3.575;VQSLOD=1.6628;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,18:20:43.70:566,44,0	0/0:0,1:1:0:0,0,0	0/1:8,0:7:5.04:5,0,90	0/0:18,0:16:18.65:0,19,228	1/1:0,11:11:21.01:265,21,0	1/1:1,11:12:24.05:303,24,0	1/1:1,11:12:24.03:303,24,0	0/0:13,0:29:24.68:0,25,90	1/1:0,3:3:3.01:38,3,0	1/1:3,9:12:27.06:341,27,0	1/1:3,8:12:13.58:187,14,0	1/1:2,13:15:33.07:417,33,0	1/1:1,7:8:15.04:190,15,0	1/1:2,9:11:15.02:190,15,0	0/1:5,0:15:21.96:22,0,25	1/1:2,8:10:18.02:227,18,0	0/0:2,0:15:14.95:0,15,32	1/1:1,5:6:12.04:152,12,0	1/1:4,14:18:42.07:516,42,0	1/1:4,6:10:15:189,15,0	1/1:2,5:7:12.51:152,13,0	1/1:1,5:6:12.02:152,12,0	1/1:1,6:7:12.02:152,12,0	1/1:1,15:16:33.09:417,33,0	1/1:1,11:12:30.08:379,30,0	1/1:3,3:6:8.99:114,9,0	1/1:4,7:11:18:227,18,0	1/1:0,4:5:14.98:170,15,0
chr10	26691984	.	T	TCCTAC	494.77	PASS	AB=1.000;AC=10;AF=0.179;AN=56;BaseQRankSum=2.115;DP=712;FS=10.969;HRun=0;HaplotypeScore=185.6293;InbreedingCoeff=0.2600;MQ=76.83;MQ0=27;MQRankSum=0.086;QD=2.04;ReadPosRankSum=-3.711;VQSLOD=0.5175;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:39,0:32:14.58:15,0,456	0/0:9,0:9:9.03:0,9,133	0/0:56,0:45:9.83:0,10,129	0/1:77,0:47:23.75:33,0,24	0/0:13,0:13:3.01:0,3,54	0/0:28,0:25:30.08:0,30,434	0/0:32,0:28:36.06:0,36,526	1/1:45,0:35:0.86:2,1,0	0/0:10,0:9:8.91:0,9,161	0/0:25,0:24:30.06:0,30,412	0/0:10,0:7:9.02:0,9,134	0/0:26,0:26:21.50:0,21,595	0/0:29,0:28:27.09:0,27,428	0/0:18,0:18:4.27:0,4,99	1/1:26,4:29:21.06:497,21,0	0/1:28,0:26:20.72:21,0,526	1/1:14,0:13:3.01:46,3,0	0/0:12,0:12:27.07:0,27,421	0/1:10,0:9:16.04:16,0,18	0/0:19,0:19:17.98:0,18,272	0/0:49,0:45:1.25:0,1,826	0/0:16,0:16:9.03:0,9,147	0/0:15,0:14:15.01:0,15,236	0/0:26,0:25:38.85:0,39,624	0/0:15,0:15:21.03:0,21,240	0/0:27,0:25:39.06:0,39,548	0/0:25,0:24:42.01:0,42,638	0/0:8,0:8:12.04:0,12,217
chr10	26692016	.	CTACAG	C	53.68	PASS	AB=0.987;AC=5;AF=0.089;AN=56;BaseQRankSum=6.048;DP=906;FS=0.933;HRun=0;HaplotypeScore=194.6494;InbreedingCoeff=0.5215;MQ=55.68;MQ0=55;MQRankSum=-1.161;QD=0.52;ReadPosRankSum=-4.194;VQSLOD=1.8213;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:42:6.38:0,6,1420	0/0:15,0:15:18.06:0,18,299	0/0:32,0:9:9.32:0,9,264	0/1:76,0:25:75.46:75,0,258	0/0:22,0:18:22.03:0,22,353	0/0:40,0:39:76.63:0,77,1439	0/0:45,0:40:98.78:0,99,1887	1/1:14,0:8:3.38:20,3,0	0/0:19,0:17:43.07:0,43,825	0/0:29,0:27:72.24:0,72,1573	0/0:7,0:4:12.04:0,12,264	0/0:42,0:41:75.23:0,75,1595	0/0:40,0:39:53.85:0,54,1135	0/0:35,0:33:32.19:0,32,548	0/0:59,1:56:39.79:0,40,1081	0/0:37,0:35:71.60:0,72,1702	1/1:1,10:10:2.42:63,2,0	0/0:15,0:15:32.12:0,32,701	0/0:14,0:13:36.03:0,36,657	0/0:29,0:29:62.12:0,62,925	0/0:72,0:66:99:0,106,2491	0/0:27,0:25:34.33:0,34,538	0/0:26,0:22:26.78:0,27,516	0/0:30,0:28:63.19:0,63,1500	0/0:32,0:32:56.66:0,57,1098	0/0:43,0:40:99:0,110,2202	0/0:28,0:26:66.13:0,66,1410	0/0:12,0:12:26.12:0,26,547
chr10	26692039	.	T	TCCTAC	4934.65	PASS	AB=0.826;AC=25;AF=0.446;AN=56;BaseQRankSum=-1.137;DP=1053;FS=20.110;HRun=0;HaplotypeScore=185.4063;InbreedingCoeff=-0.7255;MQ=56.40;MQ0=50;MQRankSum=-2.248;QD=5.33;ReadPosRankSum=-0.151;VQSLOD=2.4042;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:56,5:51:99:279,0,501	0/1:7,9:17:61.89:78,0,62	0/0:48,0:14:16.67:0,17,93	0/1:78,0:25:32.55:33,0,71	0/1:24,0:21:99:404,0,102	0/1:30,5:36:99:431,0,253	0/1:48,0:42:99:213,0,596	0/0:37,0:18:8.90:0,9,245	0/1:21,1:18:99:328,0,396	0/1:35,1:32:42.19:42,0,678	0/0:13,0:9:9.02:0,9,128	0/1:25,25:49:99:133,0,408	0/1:23,24:45:73.61:74,0,308	0/1:16,25:41:99:225,0,359	0/1:40,20:60:99:189,0,920	0/1:31,0:31:99:493,0,426	1/1:15,0:13:0.44:1,0,0	0/1:7,5:12:77.66:78,0,91	0/1:15,0:14:87.04:87,0,158	0/1:29,0:30:99:122,0,282	0/1:60,36:86:48.17:48,0,899	0/1:13,14:25:99:217,0,122	0/0:14,14:24:5.96:0,6,76	0/1:33,5:34:99:234,0,395	0/1:25,14:40:42.25:42,0,451	0/1:38,3:35:99:730,0,468	0/1:25,0:22:68.72:69,0,340	0/1:4,8:12:41.74:386,0,42
chr10	26692121	.	CTACAG	C	634.44	PASS	AB=0.990;AC=26;AF=0.464;AN=56;BaseQRankSum=4.979;DP=467;FS=19.390;HRun=0;HaplotypeScore=94.5337;InbreedingCoeff=-0.3798;MQ=45.66;MQ0=90;MQRankSum=-6.507;QD=1.59;ReadPosRankSum=0.240;VQSLOD=0.5523;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:18:0.75:1,0,361	0/0:6,0:6:9.29:0,9,53	0/1:27,0:3:2.97:3,0,80	0/1:62,0:10:5.53:6,0,159	0/0:18,0:15:0.89:0,1,331	0/1:6,0:5:42.66:43,0,82	0/1:12,0:11:34.72:35,0,55	0/1:20,2:5:24.92:25,0,135	0/1:8,0:7:44.17:44,0,286	0/1:37,0:26:2.14:2,0,551	0/1:21,0:20:4.47:4,0,303	0/1:7,0:7:0.53:1,0,44	0/1:14,0:14:56.49:87,0,56	0/1:11,1:11:7.58:144,0,8	0/1:27,0:23:24.92:25,0,758	0/1:9,0:7:32.32:50,0,32	1/1:6,2:6:10.13:147,10,0	1/1:2,0:1:2.90:16,3,0	0/0:16,0:3:3.01:0,3,52	0/1:14,0:11:38.99:39,0,77	0/1:24,0:16:11.21:11,0,64	0/0:7,0:4:9.01:0,9,100	1/1:9,0:7:3.83:21,4,0	0/1:8,0:7:27.61:28,0,48	0/1:14,0:13:5.50:5,0,318	0/0:22,0:14:42.14:0,42,1089	0/1:22,0:19:40.20:40,0,435	0/1:7,0:7:4.06:4,0,158
chr10	26692139	.	CCCTACCCTACCCTACAGTACCCTACAGTACCCTAT	C	2724.73	PASS	AB=0.879;AC=37;AF=0.771;AN=48;BaseQRankSum=0.584;DP=376;FS=13.417;HRun=0;HaplotypeScore=222.1117;InbreedingCoeff=0.3187;MQ=64.01;MQ0=34;MQRankSum=-1.082;QD=11.12;ReadPosRankSum=3.822;VQSLOD=1.4351;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:10:3.39:19,3,0	1/1:4,0:4:3.01:38,3,0	0/0:38,0:9:16.54:0,17,417	0/0:61,0:24:31.94:0,32,450	1/1:10,0:9:3.01:34,3,0	1/1:3,0:3:3.01:31,3,0	1/1:8,0:6:3.01:38,3,0	0/0:10,0:6:1.64:0,2,5	1/1:10,0:8:9.03:188,9,0	1/1:9,30:33:65.91:1244,66,0	0/1:9,12:20:0.18:0,0,0	1/1:4,0:4:3.01:98,3,0	1/1:13,0:13:9.03:185,9,0	1/1:7,0:7:2.99:24,3,0	1/1:19,0:16:6.02:178,6,0	1/1:10,0:8:3.01:40,3,0	0/1:5,0:3:4.77:83,0,5	./.	./.	0/0:10,0:8:0.02:0,0,1	1/1:16,0:13:0.72:1,1,0	./.	1/1:9,0:8:0.33:1,0,0	0/1:9,0:8:21.98:55,0,22	1/1:9,0:9:8.28:122,8,0	1/1:16,0:13:12.04:292,12,0	1/1:17,0:15:8.56:178,9,0	./.
chr10	26692161	.	CTACAG	C	1559.78	PASS	AB=0.917;AC=28;AF=0.538;AN=52;BaseQRankSum=2.181;DP=251;FS=13.536;HRun=0;HaplotypeScore=83.0266;InbreedingCoeff=0.1837;MQ=77.24;MQ0=13;MQRankSum=1.679;QD=12.28;ReadPosRankSum=2.518;VQSLOD=1.6939;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:12,0:8:27.07:31,0,27	0/1:1,0:1:0:0,0,0	0/0:40,0:21:26.35:0,26,887	0/0:56,1:30:37.10:0,37,672	1/1:5,0:5:6.02:74,6,0	0/1:3,0:3:27.21:27,0,72	0/1:6,0:4:0:0,0,0	0/0:2,0:2:1.25:0,1,3	0/1:7,0:5:5.74:104,0,6	1/1:32,0:27:33.86:461,34,0	0/1:13,0:13:0:0,0,0	0/1:2,1:3:13.61:104,0,14	1/1:5,1:5:9.03:133,9,0	1/1:4,0:4:6.02:101,6,0	1/1:3,0:3:6.02:96,6,0	1/1:9,0:6:6.02:88,6,0	./.	0/1:1,1:2:23.64:52,0,24	0/0:1,0:1:3.01:0,3,44	1/1:7,0:4:1.88:34,2,0	0/0:10,0:10:9.03:0,9,178	1/1:2,0:2:3.01:36,3,0	0/0:4,0:4:1.90:0,2,10	0/0:8,1:8:12.21:0,12,153	0/1:3,0:3:6.17:46,0,6	1/1:3,0:3:9.03:143,9,0	0/1:4,2:6:45.21:180,0,45	./.
chr10	26692163	.	ACAG	A	284.36	PASS	AB=0.900;AC=24;AF=0.522;AN=46;BaseQRankSum=2.636;DP=246;FS=37.886;HRun=0;HaplotypeScore=83.0355;InbreedingCoeff=0.0362;MQ=77.97;MQ0=13;MQRankSum=0.691;QD=2.45;ReadPosRankSum=2.186;VQSLOD=-0.0295;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:7,2:8:6.74:7,0,31	./.	0/0:40,0:21:57.10:0,57,1073	0/0:57,0:30:59.94:0,60,894	1/1:1,3:4:5.49:25,5,0	0/1:3,1:4:0.51:1,0,140	./.	./.	0/1:5,1:4:13.92:14,0,60	0/1:32,0:27:33.89:155,0,34	0/1:12,0:12:0:0,0,0	0/1:2,1:3:31.51:32,0,61	0/1:5,1:5:22.58:23,0,26	1/1:2,2:4:5.75:44,6,0	1/1:3,0:3:1.34:8,1,0	1/1:6,2:5:2.20:11,2,0	./.	0/1:2,0:2:9.85:10,0,49	0/0:1,0:1:3.01:0,3,73	1/1:4,3:4:1.05:9,1,0	0/0:10,0:10:9.03:0,9,221	1/1:0,1:1:2.74:12,3,0	0/0:2,1:3:1.97:0,2,11	0/0:9,1:9:17.79:0,18,280	0/1:4,0:4:2.42:2,0,7	1/1:1,2:3:6.85:47,7,0	0/1:6,0:6:20.92:21,0,97	./.
chr10	26692167	.	TAC	T	98.04	PASS	AB=0.890;AC=15;AF=0.300;AN=50;BaseQRankSum=2.903;DP=278;FS=26.258;HRun=0;HaplotypeScore=79.9972;InbreedingCoeff=0.0463;MQ=72.24;MQ0=27;MQRankSum=1.562;QD=1.07;ReadPosRankSum=2.601;VQSLOD=-0.3811;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:12,2:11:2.91:0,3,33	./.	0/0:43,0:18:48.84:0,49,795	0/0:61,0:27:51.81:0,52,763	1/1:1,3:4:3.63:11,4,0	0/0:5,1:5:5.60:0,6,156	./.	0/0:6,0:2:3.01:0,3,61	0/1:4,1:3:0.91:1,0,55	0/1:33,0:27:99:106,0,113	0/1:13,0:12:0:0,0,0	0/1:4,1:4:22.02:22,0,52	0/1:6,1:5:17.05:17,0,25	1/1:2,2:4:4.81:30,5,0	0/0:7,0:7:6.62:0,7,39	0/0:8,2:7:3.30:0,3,33	./.	0/1:2,0:2:1.27:1,0,55	0/0:2,0:1:3.01:0,3,60	1/1:3,3:3:1.80:5,2,0	0/0:10,0:10:9.03:0,9,182	0/1:2,1:3:0.46:0,0,18	0/0:1,1:2:2.90:0,3,16	0/0:10,1:9:17.95:0,18,274	0/1:5,0:5:2.93:3,0,11	0/1:3,2:5:7.18:20,0,7	0/0:5,0:5:2.59:0,3,86	0/0:2,0:2:5.95:0,6,42
chr10	26692174	.	T	TCCTAC	3468.91	PASS	AB=0.930;AC=44;AF=0.880;AN=50;BaseQRankSum=-1.384;DP=373;FS=0.000;HRun=0;HaplotypeScore=88.7980;InbreedingCoeff=0.0550;MQ=60.51;MQ0=45;MQRankSum=1.620;QD=9.74;ReadPosRankSum=-0.138;VQSLOD=2.3276;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:14:11.86:166,12,0	1/1:1,0:1:3:26,3,0	1/1:45,0:17:1.82:6,2,0	0/1:66,0:24:7.90:8,0,37	1/1:8,0:8:9.01:194,9,0	1/1:13,0:10:12:160,12,0	1/1:9,0:8:5.94:42,6,0	1/1:18,0:5:8.91:70,9,0	1/1:6,0:4:8.93:124,9,0	1/1:35,0:28:50.91:770,51,0	./.	1/1:7,0:6:17.96:199,18,0	1/1:11,1:8:14.81:211,15,0	1/1:8,0:7:11.90:185,12,0	0/1:8,0:8:19.39:19,0,74	1/1:16,0:12:17.73:265,18,0	./.	0/1:5,0:5:16.49:128,0,16	1/1:7,0:4:3.01:42,3,0	1/1:9,0:6:9:134,9,0	0/1:23,0:18:0:0,0,0	1/1:4,0:4:9.02:159,9,0	./.	0/1:15,1:12:38.34:43,0,38	0/1:3,4:7:0.03:0,0,0	1/1:7,0:6:14.42:199,14,0	1/1:5,0:5:12.01:233,12,0	1/1:3,0:3:6.02:85,6,0
chr10	26692361	.	TC	T	21787.42	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=2.051;DP=655;FS=9.216;HRun=1;HaplotypeScore=77.4831;InbreedingCoeff=0.9881;MQ=78.63;MQ0=0;MQRankSum=-6.662;QD=37.31;ReadPosRankSum=6.040;VQSLOD=4.7134;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,31:31:72.24:1005,72,0	1/1:0,16:16:45.15:627,45,0	0/0:20,0:20:54.36:0,54,667	0/0:14,1:15:23.55:0,24,453	1/1:0,34:34:90.30:1257,90,0	1/1:0,22:22:60.20:837,60,0	1/1:0,15:15:33.11:461,33,0	1/1:0,34:34:99:1300,99,0	1/1:0,23:23:60.20:837,60,0	1/1:0,40:40:99:1556,117,0	1/1:0,14:14:36.02:458,36,0	1/1:0,21:21:57.19:796,57,0	1/1:0,20:20:51.17:711,51,0	1/1:0,27:27:69.23:959,69,0	0/0:36,0:36:99:0,108,1612	1/1:0,24:24:63.21:879,63,0	1/1:0,18:18:42.14:586,42,0	1/1:0,4:4:12.04:167,12,0	1/1:0,22:22:66.21:906,66,0	1/1:0,30:30:87.29:1212,87,0	1/1:1,14:15:45.15:627,45,0	1/1:0,25:25:69.18:940,69,0	1/1:0,27:27:66.18:898,66,0	1/1:0,14:14:39.13:545,39,0	1/1:0,35:35:90.30:1253,90,0	1/1:0,31:31:93.29:1263,93,0	1/1:0,28:28:84.28:1163,84,0	1/1:0,14:14:39.13:544,39,0
chr10	26692675	.	CG	C	508.86	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-0.150;DP=778;FS=5.024;HRun=2;HaplotypeScore=213.1691;InbreedingCoeff=0.9835;MQ=86.98;MQ0=0;MQRankSum=-1.794;QD=25.44;ReadPosRankSum=0.967;VQSLOD=3.0076;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,144,2104	0/0:10,0:10:30.10:0,30,443	0/0:22,0:22:66.21:0,66,946	0/0:32,0:32:74.89:0,75,1057	0/0:34,0:34:99:0,99,1481	0/0:31,0:31:93.31:0,93,1382	0/0:34,0:34:99:0,99,1421	0/0:36,0:36:99:0,102,1484	0/0:31,0:31:90.27:0,90,1323	0/0:30,0:30:90.30:0,90,1328	0/0:22,0:22:66.22:0,66,984	0/0:26,0:26:78.26:0,78,1156	0/0:36,0:36:99:0,105,1539	0/0:25,0:25:75.24:0,75,1096	1/1:0,20:20:48.11:604,48,0	0/0:33,0:33:96.31:0,96,1399	0/0:30,0:30:84.24:0,84,1223	0/0:11,0:11:30.10:0,30,449	0/0:25,0:25:69.22:0,69,998	0/0:29,0:29:87.28:0,87,1281	0/0:51,0:51:99:0,147,2187	0/0:19,0:19:54.17:0,54,791	0/0:19,0:19:57.18:0,57,830	0/0:27,0:27:81.21:0,81,1146	0/0:30,0:30:90.29:0,90,1322	0/0:29,0:29:81.26:0,81,1181	0/0:32,0:31:90.28:0,90,1305	0/0:6,0:6:15.05:0,15,225
chr10	26693036	.	CT	C	6575.79	PASS	AB=1.000;AC=53;AF=0.946;AN=56;BaseQRankSum=-5.232;DP=320;FS=18.988;HRun=9;HaplotypeScore=47.0312;InbreedingCoeff=0.5338;MQ=88.55;MQ0=0;MQRankSum=-5.477;QD=21.56;ReadPosRankSum=5.273;VQSLOD=3.4650;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,21:22:51.03:467,51,0	1/1:1,1:2:3:27,3,0	0/1:20,0:19:8.29:8,0,223	0/0:14,0:12:19.92:0,20,213	1/1:0,18:18:54.03:494,54,0	1/1:1,11:12:33.02:301,33,0	1/1:1,12:13:30.01:275,30,0	1/1:4,35:39:99:942,105,0	1/1:2,4:6:15.01:137,15,0	1/1:2,5:7:15.01:137,15,0	1/1:0,12:12:33.02:302,33,0	1/1:0,7:7:21.01:192,21,0	1/1:0,9:9:27.01:247,27,0	1/1:0,10:10:30.02:275,30,0	1/1:2,0:7:10.18:30,10,0	1/1:1,12:13:36.02:330,36,0	1/1:2,10:12:27.01:247,27,0	1/1:1,6:7:15.01:137,15,0	1/1:1,11:12:33:297,33,0	1/1:1,11:12:33.02:302,33,0	1/1:2,3:5:9:82,9,0	1/1:0,4:4:9:82,9,0	1/1:2,7:9:21.01:192,21,0	1/1:0,4:4:12.01:110,12,0	1/1:3,11:14:30.01:275,30,0	1/1:2,8:10:24.01:220,24,0	1/1:0,7:7:21.01:192,21,0	1/1:0,12:11:30.02:275,30,0
chr10	26693113	.	T	TTATATTA	5230.32	PASS	AC=42;AF=0.913;AN=46;BaseQRankSum=-4.348;DP=173;FS=0.000;HRun=0;HaplotypeScore=45.1616;InbreedingCoeff=0.3111;MQ=82.10;MQ0=3;MQRankSum=0.674;QD=42.87;ReadPosRankSum=1.891;VQSLOD=4.3856;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,2:8:18.05:409,18,0	1/1:1,0:2:3.01:53,3,0	0/0:12,0:8:2.29:0,2,20	0/0:37,0:15:12.09:0,12,79	1/1:1,0:2:3.01:77,3,0	1/1:0,0:2:3.01:53,3,0	1/1:1,0:2:3.01:35,3,0	1/1:21,0:38:87.30:1445,87,0	1/1:1,0:1:3.01:53,3,0	1/1:0,2:3:6.02:231,6,0	1/1:3,1:4:9.02:188,9,0	1/1:3,0:3:9.03:135,9,0	1/1:1,0:1:3.01:47,3,0	1/1:2,0:2:3.01:48,3,0	1/1:5,0:5:12.04:235,12,0	./.	1/1:8,2:10:18.06:484,18,0	./.	1/1:1,7:9:24.03:368,24,0	1/1:0,1:1:3.01:115,3,0	./.	./.	1/1:3,0:3:3.01:48,3,0	./.	1/1:2,2:4:9.02:256,9,0	1/1:3,0:3:6.02:92,6,0	1/1:6,2:8:15.05:433,15,0	1/1:8,2:10:24.03:426,24,0
chr10	26693118	.	T	TTA	1791.60	PASS	AB=0.907;AC=31;AF=0.674;AN=46;BaseQRankSum=-1.132;DP=167;FS=16.348;HRun=0;HaplotypeScore=42.1347;InbreedingCoeff=-0.1497;MQ=84.53;MQ0=4;MQRankSum=-3.600;QD=14.57;ReadPosRankSum=5.211;VQSLOD=1.6787;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:8,1:9:8.13:112,0,8	1/1:2,0:2:2.92:17,3,0	0/1:11,0:7:5.04:5,0,29	0/0:39,0:16:5.55:0,6,83	1/1:2,0:2:1.55:4,2,0	1/1:2,0:2:0.47:1,0,0	0/1:2,0:2:0:0,0,0	0/1:27,6:32:19.23:558,0,19	1/1:1,0:1:3.01:53,3,0	1/1:3,0:3:6.01:55,6,0	0/1:3,0:3:19.84:20,0,20	0/1:2,1:3:1.82:48,0,2	1/1:2,0:2:3.01:47,3,0	1/1:2,0:2:3.01:48,3,0	0/1:1,3:4:3.47:109,0,3	./.	1/1:5,4:9:21.05:288,21,0	./.	0/1:8,0:8:85.44:100,0,85	0/1:2,0:2:21.52:22,0,33	./.	./.	0/0:2,0:2:0.89:0,1,2	./.	0/1:5,0:5:42.98:43,0,52	1/1:2,1:3:6.02:92,6,0	1/1:5,2:7:12.49:137,12,0	0/1:9,1:10:47.17:154,0,47
chr10	26693120	.	ATAT	A	304.15	PASS	AB=0.888;AC=12;AF=0.250;AN=48;BaseQRankSum=-2.525;DP=164;FS=6.121;HRun=0;HaplotypeScore=49.1621;InbreedingCoeff=-0.1363;MQ=82.43;MQ0=4;MQRankSum=1.332;QD=3.80;ReadPosRankSum=-1.347;VQSLOD=0.4518;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:21.50:0,21,279	0/0:2,0:2:3.01:0,3,65	0/1:11,0:7:16.54:17,0,48	0/0:38,0:15:8.78:0,9,128	0/0:2,0:2:3.01:0,3,67	0/0:2,0:2:3.01:0,3,68	0/0:2,0:2:3.01:0,3,33	0/1:28,4:31:99:108,0,827	0/1:1,1:2:4.16:4,0,33	0/0:3,0:3:6.02:0,6,78	0/0:3,0:3:9.03:0,9,123	0/0:4,0:4:7.26:0,7,80	1/1:2,0:2:3.01:47,3,0	1/1:1,0:1:3.01:48,3,0	0/1:5,0:5:53.31:53,0,83	./.	0/1:9,0:9:59.93:60,0,84	./.	0/1:7,0:7:18.40:18,0,235	0/0:2,0:2:6.02:0,6,80	./.	./.	0/0:2,0:2:3.01:0,3,45	0/0:1,0:1:3.01:0,3,41	0/0:6,0:6:15.05:0,15,199	0/1:2,1:3:30.83:31,0,33	0/0:7,0:7:14.25:0,14,148	0/1:6,2:8:47.60:48,0,182
chr10	26693347	.	AGG	A	445.68	PASS	AB=0.974;AC=18;AF=0.321;AN=56;BaseQRankSum=-4.064;DP=666;FS=2.007;HRun=3;HaplotypeScore=319.4009;InbreedingCoeff=-0.3780;MQ=36.89;MQ0=21;MQRankSum=2.248;QD=1.06;ReadPosRankSum=4.147;VQSLOD=-0.5744;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:28:48.42:48,0,55	0/1:12,0:12:53.30:53,0,86	0/0:21,0:4:5.07:0,5,64	0/0:37,0:12:0.28:0,0,158	0/0:19,0:19:11.97:0,12,46	0/1:31,0:30:43.12:43,0,170	0/1:26,0:21:27.15:27,0,91	0/1:47,0:46:99:135,0,304	0/1:33,2:34:9.38:9,0,243	0/1:23,3:24:68.54:69,0,238	0/0:17,0:16:18.60:0,19,72	0/1:28,2:27:32.31:32,0,107	0/0:28,3:30:19.94:0,20,263	0/0:23,1:24:17.18:0,17,178	0/0:34,0:32:52.18:0,52,286	0/1:29,0:26:14.27:14,0,202	0/0:8,0:7:2.94:0,3,18	0/0:4,1:4:2.94:0,3,18	0/1:20,0:20:18.38:18,0,236	0/1:18,0:17:1.15:1,0,45	0/0:14,0:13:7.99:0,8,44	0/1:17,0:17:20.86:21,0,68	0/1:13,1:13:12.85:13,0,25	1/1:29,1:29:4.82:29,5,0	0/1:21,0:20:12.41:12,0,80	0/1:25,1:23:34.89:35,0,314	0/0:34,0:31:23.78:0,24,340	0/1:9,1:7:36.21:36,0,76
chr10	26693382	.	GAGAGAC	G	17785.29	PASS	AB=0.648;AC=44;AF=0.786;AN=56;BaseQRankSum=-3.580;DP=761;FS=38.212;HRun=0;HaplotypeScore=314.1933;InbreedingCoeff=0.3604;MQ=42.65;MQ0=8;MQRankSum=-3.245;QD=27.70;ReadPosRankSum=1.594;VQSLOD=3.1103;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:21,14:34:26.27:962,0,26	1/1:3,11:14:21.07:454,21,0	0/0:30,0:16:33.10:0,33,792	0/0:49,0:26:43.20:0,43,1023	1/1:6,13:19:33.10:677,33,0	0/1:11,32:42:12.50:1211,0,13	1/1:9,17:23:14.57:568,15,0	1/1:41,7:43:10.96:765,11,0	1/1:12,25:36:49.02:1460,49,0	1/1:10,17:26:48.12:949,48,0	1/1:6,12:17:21.54:418,22,0	1/1:13,15:26:39.22:1066,39,0	1/1:20,15:34:60.42:1252,60,0	1/1:8,22:30:23.79:1069,24,0	0/0:40,0:38:67.52:0,68,2370	1/1:12,16:26:18.28:755,18,0	1/1:1,11:12:9.92:184,10,0	0/1:4,3:7:30.72:76,0,31	0/1:22,15:34:71.05:761,0,71	1/1:8,15:22:22.76:628,23,0	0/1:5,14:19:10.41:59,0,10	1/1:4,13:17:33.11:641,33,0	1/1:5,9:13:9.48:479,9,0	1/1:12,15:27:17.12:249,17,0	0/1:7,12:19:1.45:605,0,1	1/1:13,18:28:47.53:1090,48,0	1/1:14,21:34:27.38:1067,27,0	1/1:13,0:12:4.99:340,5,0
chr10	26694056	.	TAGAAACCCCAGAGACC	T	43219.36	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=10.343;DP=645;FS=4.146;HRun=0;HaplotypeScore=299.8308;InbreedingCoeff=0.9008;MQ=82.43;MQ0=0;MQRankSum=-13.491;QD=77.32;ReadPosRankSum=6.087;VQSLOD=3.8654;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,26:33:45.15:1860,45,0	1/1:3,12:15:33.11:1473,33,0	0/0:28,0:27:78.27:0,78,4918	0/0:29,0:29:81.16:0,81,4689	1/1:5,21:26:41.93:1862,42,0	1/1:2,27:29:63.22:2888,63,0	1/1:5,23:28:48.16:2097,48,0	1/1:11,24:35:74.86:1846,75,0	1/1:3,16:19:39.13:1828,39,0	1/1:4,18:22:51.11:1945,51,0	1/1:4,17:21:36.12:1448,36,0	1/1:2,28:30:63.22:2950,63,0	1/1:6,26:32:57.20:2671,57,0	1/1:8,15:23:39.13:1828,39,0	0/0:29,0:29:78.27:0,78,5708	1/1:4,19:23:45.15:2109,45,0	1/1:2,17:19:21.07:979,21,0	1/1:5,6:11:9.03:362,9,0	1/1:4,15:19:42.03:1494,42,0	1/1:3,25:28:60.15:2590,60,0	1/1:4,1:5:2.99:24,3,0	1/1:5,18:23:27.02:1143,27,0	1/1:5,22:27:44.81:1846,45,0	1/1:3,12:15:21.07:984,21,0	1/1:4,11:15:27.09:1266,27,0	1/1:4,23:27:66.17:2858,66,0	1/1:6,22:28:53.97:2465,54,0	1/1:0,6:6:9.03:402,9,0
chr10	26695209	.	TA	T	14684.48	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=10.295;DP=567;FS=17.883;HRun=6;HaplotypeScore=196.6796;InbreedingCoeff=0.9113;MQ=75.52;MQ0=0;MQRankSum=-5.831;QD=28.29;ReadPosRankSum=3.935;VQSLOD=2.3030;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,21:24:60.15:644,60,0	1/1:0,11:11:30.08:322,30,0	0/0:15,0:15:39.12:0,39,502	0/0:11,0:11:7.35:0,7,332	1/1:0,29:29:72.17:774,72,0	1/1:1,16:17:42.10:451,42,0	1/1:2,21:23:60.15:644,60,0	1/1:3,26:29:78.19:838,78,0	1/1:1,17:18:51.13:548,51,0	1/1:5,28:33:84.21:902,84,0	1/1:0,23:23:69.17:741,69,0	1/1:0,19:19:54.14:580,54,0	1/1:0,30:30:84.21:902,84,0	1/1:1,17:18:45.11:483,45,0	0/0:22,0:22:63.19:0,63,814	1/1:1,12:13:36.09:387,36,0	1/1:0,13:12:36.09:387,36,0	1/1:0,14:14:36.09:387,36,0	1/1:0,12:12:36.09:387,36,0	1/1:0,27:27:75.18:806,75,0	1/1:0,10:10:26.24:288,26,0	1/1:2,19:21:54.13:580,54,0	1/1:2,23:25:60.14:645,60,0	1/1:2,6:8:15.04:161,15,0	1/1:2,27:29:78.19:838,78,0	1/1:6,27:33:84.21:902,84,0	1/1:4,31:35:90.23:967,90,0	1/1:1,4:5:3.75:118,4,0
chr10	26695352	.	AAC	A	290.58	PASS	AB=0.918;AC=15;AF=0.288;AN=52;BaseQRankSum=2.210;DP=508;FS=5.211;HRun=0;HaplotypeScore=96.6620;InbreedingCoeff=-0.2633;MQ=68.17;MQ0=11;MQRankSum=-1.041;QD=1.13;ReadPosRankSum=-0.813;VQSLOD=1.5776;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:13:9.02:93,9,0	0/0:1,0:1:3.01:0,3,45	./.	./.	0/1:12,3:16:35.33:35,0,247	0/1:16,4:20:76.83:77,0,134	0/1:24,0:23:41.11:41,0,222	0/0:26,0:25:8.82:0,9,54	0/1:13,3:18:58.29:58,0,139	0/1:24,0:24:12.04:12,0,270	0/0:20,0:19:18.03:0,18,227	0/1:16,3:19:32.19:32,0,320	0/0:14,0:14:3.01:0,3,41	0/1:12,3:15:14.63:15,0,139	0/0:18,0:20:8.99:0,9,76	0/0:18,0:18:18.06:0,18,268	0/0:18,0:21:23.99:0,24,223	0/0:17,0:15:11.54:0,12,218	0/0:8,0:8:5.90:0,6,41	0/1:17,0:17:11.51:12,0,217	0/0:18,0:18:18.05:0,18,247	0/1:13,1:14:17.99:18,0,129	0/1:20,1:22:10.84:11,0,328	0/1:23,0:22:2.89:3,0,100	0/0:22,0:22:18.55:0,19,559	0/1:15,2:17:5.58:6,0,290	0/1:15,0:14:24.51:25,0,202	0/0:10,0:10:5.05:0,5,50
chr10	26695466	.	AT	A	17428.20	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=10.300;DP=597;FS=15.460;HRun=2;HaplotypeScore=105.7048;InbreedingCoeff=0.9941;MQ=79.59;MQ0=0;MQRankSum=-7.900;QD=33.91;ReadPosRankSum=6.223;VQSLOD=3.0623;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,20:21:48.11:576,48,0	1/1:1,14:15:42.13:521,42,0	0/0:27,0:26:75.24:0,75,1111	0/0:26,0:25:71.90:0,72,973	1/1:0,32:32:96.23:1169,96,0	1/1:0,19:19:51.16:632,51,0	1/1:1,14:15:42.13:518,42,0	1/1:0,23:23:69.21:843,69,0	1/1:1,16:17:39.12:484,39,0	1/1:0,20:20:60.17:730,60,0	1/1:0,25:25:69.22:855,69,0	1/1:1,23:24:69.22:855,69,0	1/1:0,28:28:81.25:1003,81,0	1/1:0,24:24:66.21:818,66,0	0/0:30,0:30:90.29:0,90,1327	1/1:1,25:26:75.24:929,75,0	1/1:0,16:16:39.12:483,39,0	1/1:0,11:11:30.09:372,30,0	1/1:0,15:15:45.11:531,45,0	1/1:0,31:31:90.28:1116,90,0	1/1:0,21:21:60.19:744,60,0	1/1:1,13:14:39.12:483,39,0	1/1:1,19:20:54.17:670,54,0	1/1:1,21:22:54.17:669,54,0	1/1:2,24:26:39.86:755,40,0	1/1:3,18:21:54.17:669,54,0	1/1:0,22:22:66.21:818,66,0	1/1:0,6:6:15.05:186,15,0
chr10	26696311	.	T	TA	15497.86	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=10.509;DP=630;FS=0.516;HRun=8;HaplotypeScore=206.7374;InbreedingCoeff=0.9373;MQ=74.68;MQ0=0;MQRankSum=-5.247;QD=27.67;ReadPosRankSum=3.102;VQSLOD=2.2639;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,31:37:87.26:1004,87,0	1/1:0,12:12:30.09:346,30,0	0/0:24,0:25:56.97:0,57,505	0/0:16,0:16:21.42:0,21,299	1/1:3,26:29:63.62:713,64,0	1/1:1,23:24:66.20:762,66,0	1/1:3,16:19:45.13:519,45,0	1/1:6,29:35:87.23:982,87,0	1/1:2,12:14:33.10:381,33,0	1/1:4,18:22:51.15:587,51,0	1/1:2,16:19:48.06:524,48,0	1/1:6,24:30:69.21:796,69,0	1/1:5,22:27:63.19:727,63,0	1/1:2,21:23:63.19:727,63,0	0/0:29,0:29:81.03:0,81,737	1/1:3,18:21:51.15:588,51,0	1/1:4,17:21:42.12:485,42,0	1/1:4,8:12:21.06:242,21,0	1/1:1,9:10:27.08:312,27,0	1/1:5,25:30:75.22:865,75,0	1/1:2,12:14:33.06:366,33,0	1/1:3,26:30:78.02:865,78,0	1/1:5,19:24:54.16:623,54,0	1/1:0,14:14:38.90:450,39,0	1/1:4,31:36:91.51:1034,92,0	1/1:6,25:31:78.20:873,78,0	1/1:4,21:25:60.18:692,60,0	1/1:0,1:1:3.01:35,3,0
chr10	26697096	.	TA	T	822.67	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.919;DP=657;FS=4.081;HRun=3;HaplotypeScore=168.4233;InbreedingCoeff=0.9826;MQ=61.88;MQ0=2;MQRankSum=-7.085;QD=24.93;ReadPosRankSum=1.351;VQSLOD=2.9961;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:87.10:0,87,1186	0/0:12,0:12:36.12:0,36,517	0/0:30,0:24:72.23:0,72,986	0/0:11,0:9:27.09:0,27,375	0/0:33,0:33:90.30:0,90,1294	0/0:27,0:27:78.25:0,78,1097	0/0:13,0:13:39.05:0,39,514	0/0:25,0:25:72.24:0,72,1021	0/0:28,0:28:81.26:0,81,1147	0/0:33,0:33:99:0,99,1378	0/0:21,0:21:63.20:0,63,887	0/0:23,0:23:63.21:0,63,904	0/0:31,0:31:78.25:0,78,1104	0/0:18,0:18:54.16:0,54,744	1/1:7,26:33:98.93:918,99,0	0/0:21,0:21:60.20:0,60,863	0/0:22,0:22:60.12:0,60,800	0/0:23,0:23:43.64:0,44,797	0/0:14,0:13:30.10:0,30,432	0/0:29,0:29:84.28:0,84,1209	0/0:13,0:13:36.11:0,36,501	0/0:25,0:25:75.24:0,75,1059	0/0:30,0:30:84.23:0,84,1165	0/0:14,0:14:39.13:0,39,560	0/0:35,0:35:99:0,99,1425	0/0:30,0:30:81.27:0,81,1148	0/0:28,0:28:84.27:0,84,1187	0/0:5,0:5:15.05:0,15,216
chr10	26697101	.	AAATACAGG	A	2119.68	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.154;DP=659;FS=5.692;HRun=0;HaplotypeScore=260.3100;InbreedingCoeff=0.9839;MQ=61.90;MQ0=2;MQRankSum=-7.210;QD=68.38;ReadPosRankSum=2.071;VQSLOD=2.9872;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:78.26:0,78,2589	0/0:14,0:14:42.14:0,42,1333	0/0:32,0:26:75.24:0,75,2487	0/0:14,0:12:36.11:0,36,1181	0/0:32,0:32:96.27:0,96,2990	0/0:28,0:28:78.22:0,78,2470	0/0:13,0:13:36.12:0,36,1227	0/0:24,0:24:72.21:0,72,1983	0/0:27,0:27:75.21:0,75,2380	0/0:34,0:34:99:0,102,3338	0/0:22,0:22:63.19:0,63,1969	0/0:21,0:21:57.20:0,57,1858	0/0:31,0:31:75.21:0,75,2323	0/0:19,0:19:57.18:0,57,1838	1/1:5,26:31:93.30:2215,93,0	0/0:20,0:20:54.17:0,54,1795	0/0:22,0:22:63.15:0,63,1957	0/0:24,0:24:72.10:0,72,2128	0/0:13,0:12:33.11:0,33,971	0/0:28,0:28:84.27:0,84,2752	0/0:14,0:14:39.13:0,39,1266	0/0:26,0:26:72.22:0,72,2166	0/0:27,0:27:80.96:0,81,2438	0/0:16,0:16:45.14:0,45,1423	0/0:36,0:36:99:0,102,3170	0/0:27,0:27:78.27:0,78,2529	0/0:28,0:28:84.21:0,84,2463	0/0:5,0:5:15.05:0,15,535
chr10	26697145	.	GAA	G	15934.61	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-9.013;DP=631;FS=1.191;HRun=10;HaplotypeScore=132.1128;InbreedingCoeff=0.9685;MQ=67.49;MQ0=4;MQRankSum=4.095;QD=28.35;ReadPosRankSum=4.585;VQSLOD=4.1008;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,25:27:50.55:745,51,0	1/1:0,11:11:33.09:368,33,0	0/0:21,0:18:24.05:0,24,359	0/0:15,0:12:16.26:0,16,175	1/1:4,31:35:90.22:1003,90,0	1/1:1,23:24:66.18:736,66,0	1/1:2,9:11:10.39:281,10,0	1/1:2,27:28:78.17:851,78,0	1/1:4,20:24:57.14:635,57,0	1/1:5,22:28:65.88:714,66,0	1/1:2,18:20:51.13:568,51,0	1/1:2,24:26:66.17:736,66,0	1/1:1,27:28:69.18:769,69,0	1/1:2,13:14:36.09:401,36,0	0/0:4,0:33:68.59:0,69,246	1/1:1,18:19:51.13:569,51,0	1/1:3,24:27:66.17:736,66,0	1/1:2,19:21:57.15:635,57,0	1/1:2,14:15:39.09:434,39,0	1/1:3,28:31:84.22:936,84,0	1/1:2,14:16:39.10:435,39,0	1/1:3,16:19:45.12:502,45,0	1/1:1,29:30:84.22:936,84,0	1/1:0,12:12:33.09:368,33,0	1/1:2,23:25:66.16:736,66,0	1/1:4,24:28:69.16:769,69,0	1/1:4,30:34:84.22:936,84,0	1/1:1,5:5:12.02:134,12,0
chr10	26697223	.	G	GAA	1461.97	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-1.567;DP=687;FS=2.149;HRun=8;HaplotypeScore=89.8576;InbreedingCoeff=0.9933;MQ=62.81;MQ0=3;MQRankSum=-2.387;QD=32.49;ReadPosRankSum=1.005;VQSLOD=3.8121;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,105,1146	0/0:12,0:12:33.06:0,33,357	0/0:16,0:15:27.05:0,27,293	0/0:16,0:15:36.08:0,36,399	0/0:38,0:38:99:0,102,1128	0/0:23,0:23:63.12:0,63,683	0/0:19,0:19:37.14:0,37,480	0/0:30,0:30:66.13:0,66,722	0/0:18,0:18:51.13:0,51,568	0/0:32,0:32:81.20:0,81,896	0/0:26,0:26:66.16:0,66,735	0/0:30,0:30:81.22:0,81,903	0/0:29,0:30:72.15:0,72,861	0/0:19,0:18:51.11:0,51,559	1/1:6,37:45:99:1557,102,0	0/0:24,0:24:60.14:0,60,660	0/0:23,0:23:57.15:0,57,635	0/0:18,0:18:42.08:0,42,468	0/0:16,0:15:27.02:0,27,291	0/0:27,0:27:72.16:0,72,793	0/0:21,0:21:60.16:0,60,669	0/0:21,0:21:51.13:0,51,569	0/0:25,0:25:60.13:0,60,660	0/0:15,0:15:36.09:0,36,401	0/0:29,0:29:87.24:0,87,970	0/0:26,0:26:60.11:0,60,662	0/0:35,0:35:90.22:0,90,994	0/0:11,0:10:21.05:0,21,234
chr10	26698133	.	CATAA	C	20071.65	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=10.666;DP=573;FS=2.705;HRun=0;HaplotypeScore=185.4009;InbreedingCoeff=0.9615;MQ=74.32;MQ0=0;MQRankSum=-14.061;QD=41.56;ReadPosRankSum=3.688;VQSLOD=5.3747;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,22:23:39.13:712,39,0	1/1:1,11:12:30.10:581,30,0	0/0:28,0:28:81.28:0,81,2144	0/0:32,0:31:87.75:0,88,2128	1/1:3,16:19:26.93:501,27,0	1/1:0,16:16:33.11:639,33,0	1/1:0,22:22:27.09:523,27,0	1/1:2,24:26:72.20:1357,72,0	1/1:1,23:24:63.22:1214,63,0	1/1:1,19:20:57.20:1101,57,0	1/1:1,12:13:14.90:290,15,0	1/1:2,20:22:60.21:1161,60,0	1/1:0,33:33:87.30:1684,87,0	1/1:2,26:28:69.24:1335,69,0	0/0:30,0:30:84.27:0,84,2244	1/1:5,16:21:45.15:871,45,0	1/1:1,9:10:21.07:406,21,0	1/1:1,4:5:12.04:232,12,0	1/1:1,21:22:60.18:1086,60,0	1/1:1,27:28:57.20:1103,57,0	1/1:3,25:28:14.95:290,15,0	1/1:1,15:16:27.09:523,27,0	1/1:0,14:14:26.83:522,27,0	1/1:1,7:8:18.06:348,18,0	1/1:0,21:21:48.16:925,48,0	1/1:2,26:28:72.25:1395,72,0	1/1:0,19:19:54.19:1042,54,0	1/1:0,5:5:12.04:231,12,0
chr10	26698220	.	T	TAGA	17586.98	PASS	AB=0.640;AC=49;AF=0.875;AN=56;BaseQRankSum=4.882;DP=466;FS=19.494;HRun=0;HaplotypeScore=133.3821;InbreedingCoeff=0.8423;MQ=54.04;MQ0=0;MQRankSum=-9.568;QD=43.97;ReadPosRankSum=2.565;VQSLOD=4.7833;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:7,9:16:5.63:338,0,6	1/1:1,7:8:21.07:458,21,0	0/0:16,0:11:30.09:0,30,445	0/0:22,0:22:57.15:0,57,821	1/1:6,9:15:24.08:506,24,0	1/1:3,12:15:33.07:674,33,0	1/1:3,15:18:42.14:914,42,0	1/1:8,12:20:45.15:896,45,0	1/1:5,17:22:51.14:1068,51,0	1/1:6,17:24:60.19:1264,60,0	1/1:6,10:16:30.10:653,30,0	1/1:4,11:15:36.12:784,36,0	1/1:11,13:24:51.14:1005,51,0	1/1:9,11:20:36.12:771,36,0	0/0:28,0:28:78.26:0,78,1217	1/1:5,12:17:45.12:936,45,0	1/1:2,8:10:21.07:458,21,0	1/1:3,3:6:9.03:197,9,0	1/1:7,8:14:27.09:553,27,0	1/1:7,13:20:42.11:855,42,0	1/1:2,10:12:29.89:427,30,0	1/1:6,6:12:17.70:347,18,0	1/1:5,8:13:21.07:458,21,0	1/1:3,9:12:21.54:459,22,0	1/1:6,18:24:60.18:1257,60,0	1/1:6,13:20:54.07:1006,54,0	1/1:6,12:19:39.13:845,39,0	1/1:0,7:7:21.07:457,21,0
chr10	26698413	.	A	AT	221.33	PASS	AB=0.921;AC=8;AF=0.160;AN=50;BaseQRankSum=-2.769;DP=399;FS=7.519;HRun=0;HaplotypeScore=44.5354;InbreedingCoeff=-0.0266;MQ=29.02;MQ0=117;MQRankSum=0.912;QD=2.54;ReadPosRankSum=-0.644;VQSLOD=1.0623;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:4:8.81:0,9,66	1/1:0,1:1:3.01:48,3,0	0/0:95,0:7:14.91:0,15,206	0/0:105,0:10:27.07:0,27,357	0/0:5,0:3:3:0,3,28	0/0:7,0:3:9.01:0,9,90	0/0:7,0:4:8.92:0,9,74	0/1:21,1:7:32.90:33,0,115	0/0:4,0:3:5.93:0,6,44	0/0:5,0:3:6.01:0,6,68	0/1:7,1:6:14.40:31,0,14	0/1:7,0:6:4.93:5,0,157	0/0:11,0:9:21.05:0,21,251	0/0:9,0:6:8.99:0,9,99	0/0:11,0:10:24.08:0,24,334	0/0:5,0:3:8.84:0,9,72	./.	0/0:3,0:3:8.99:0,9,92	0/1:17,4:10:99:165,0,125	0/0:7,0:4:1.25:0,1,3	0/1:19,1:5:32.71:33,0,46	./.	0/0:3,0:2:6:0,6,63	0/0:2,0:2:6.02:0,6,79	0/1:7,1:7:29.71:30,0,162	0/0:10,0:7:21.03:0,21,218	0/0:5,0:5:9.01:0,9,100	./.
chr10	26699947	.	TATATATATATATATATATATATATATATAA	T	8655.92	PASS	AB=0.982;AC=33;AF=0.688;AN=48;BaseQRankSum=2.627;DP=195;FS=0.000;HRun=0;HaplotypeScore=148.1414;InbreedingCoeff=-0.0920;MQ=56.67;MQ0=4;MQRankSum=-4.029;QD=49.18;ReadPosRankSum=4.411;VQSLOD=3.7275;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:7,0:7:3.01:145,3,0	1/1:1,1:2:6.02:419,6,0	0/0:4,0:1:2.96:0,3,19	0/0:13,0:4:2.90:0,3,16	0/1:21,1:22:5.92:808,0,6	1/1:9,1:10:9.03:575,9,0	1/1:4,0:4:3.01:160,3,0	1/1:11,0:10:14.33:428,14,0	1/1:6,0:6:12.04:639,12,0	0/1:15,0:15:1.12:297,0,1	0/1:14,1:15:57.33:446,0,57	./.	1/1:9,0:9:12.04:714,12,0	0/1:6,0:6:37.96:166,0,38	0/1:2,0:2:12.91:13,0,98	0/0:2,0:1:2.99:0,3,24	1/1:1,4:5:3.01:241,3,0	0/1:2,0:2:37.39:108,0,37	0/1:9,0:9:31.73:392,0,32	1/1:8,0:8:11.94:706,12,0	./.	1/1:2,0:2:3.01:178,3,0	./.	./.	1/1:8,0:7:9.03:412,9,0	0/1:15,0:14:8:778,0,8	0/1:16,1:17:18.28:977,0,18	1/1:1,0:1:3.01:55,3,0
chr10	26699949	.	TATATATATATATATATATATATATATAA	T	10226.77	PASS	AB=1.000;AC=42;AF=0.913;AN=46;BaseQRankSum=2.183;DP=190;FS=0.000;HRun=0;HaplotypeScore=136.7730;InbreedingCoeff=0.2075;MQ=54.59;MQ0=4;MQRankSum=-0.676;QD=58.11;ReadPosRankSum=2.416;VQSLOD=3.3237;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,6:7:3.01:193,3,0	1/1:1,1:2:6.02:431,6,0	0/1:4,0:1:0:0,0,0	0/0:13,0:4:5.94:0,6,43	1/1:6,16:22:15.05:898,15,0	1/1:1,11:12:9.03:635,9,0	1/1:0,4:4:3.01:208,3,0	1/1:7,0:6:18.04:295,18,0	1/1:1,5:6:12.04:748,12,0	1/1:1,14:15:23.87:391,24,0	1/1:4,11:15:9.03:436,9,0	./.	1/1:0,9:9:12.04:907,12,0	1/1:1,5:6:3.01:220,3,0	0/1:2,0:2:39.14:39,0,75	./.	1/1:4,0:4:3.01:204,3,0	1/1:2,0:2:3.01:78,3,0	1/1:1,8:9:26.98:639,27,0	1/1:0,8:8:12.04:899,12,0	./.	1/1:0,2:2:3.01:226,3,0	./.	./.	1/1:1,7:7:9.03:557,9,0	1/1:0,14:13:29.59:1085,30,0	1/1:4,13:17:18.06:1033,18,0	1/1:1,0:1:3.01:104,3,0
chr10	26700594	.	C	CTG	346.52	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-0.296;DP=641;FS=2.461;HRun=0;HaplotypeScore=78.5227;InbreedingCoeff=0.9679;MQ=70.79;MQ0=1;MQRankSum=0.833;QD=24.75;ReadPosRankSum=0.302;VQSLOD=3.7593;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:16:29.20:0,29,400	0/0:14,0:15:26.90:0,27,297	0/0:24,0:16:29.68:0,30,339	0/0:22,0:16:18.24:0,18,178	0/0:29,0:29:75.24:0,75,923	0/0:23,0:23:60.17:0,60,725	0/0:18,0:18:42.12:0,42,504	0/0:43,0:43:93.28:0,93,1124	0/0:26,0:26:69.19:0,69,825	0/0:28,0:29:72.06:0,72,864	0/0:24,0:25:69.05:0,69,826	0/0:19,0:22:59.68:0,60,670	0/0:39,0:39:99:0,102,1241	0/0:18,0:18:39.09:0,39,453	1/1:3,11:14:27.09:441,27,0	0/0:34,0:34:81.25:0,81,996	0/0:15,0:15:15.72:0,16,453	0/0:11,0:11:32.97:0,33,383	0/0:19,0:19:42.12:0,42,505	0/0:32,0:32:75.05:0,75,888	0/0:22,0:22:54.17:0,54,664	0/0:19,0:19:54.17:0,54,664	0/0:30,0:30:78.25:0,78,960	0/0:15,0:15:36.11:0,36,442	0/0:21,0:23:50.97:0,51,591	0/0:17,0:18:47.98:0,48,568	0/0:34,0:34:84.25:0,84,1021	0/0:6,0:6:18.06:0,18,222
chr10	26701127	.	T	TC	26892.15	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-3.238;DP=709;FS=6.623;HRun=1;HaplotypeScore=98.9906;InbreedingCoeff=0.9977;MQ=81.94;MQ0=0;MQRankSum=-8.741;QD=40.26;ReadPosRankSum=4.810;VQSLOD=4.8484;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,22:22:51.17:764,51,0	1/1:0,8:8:24.08:360,24,0	0/0:22,0:22:45.60:0,46,556	0/0:19,0:19:57.10:0,57,718	1/1:2,26:28:75.25:1122,75,0	1/1:1,26:27:75.25:1124,75,0	1/1:1,19:20:57.19:854,57,0	1/1:3,41:44:99:1842,129,0	1/1:0,17:17:48.16:719,48,0	1/1:2,39:41:99:1709,117,0	1/1:0,25:25:75.25:1121,75,0	1/1:1,20:21:54.18:809,54,0	1/1:0,24:24:60.20:899,60,0	1/1:0,27:27:75.25:1123,75,0	1/1:1,33:34:90.30:1349,90,0	1/1:3,25:28:66.22:989,66,0	1/1:0,18:18:51.17:764,51,0	1/1:0,11:11:33.11:494,33,0	1/1:3,29:32:93.31:1390,93,0	1/1:2,35:36:96.28:1413,96,0	1/1:1,17:18:45.15:674,45,0	1/1:1,34:35:90.30:1348,90,0	1/1:3,25:28:72.24:1076,72,0	1/1:0,14:14:42.14:629,42,0	1/1:0,35:35:87.29:1304,87,0	1/1:2,28:30:84.24:1227,84,0	1/1:2,33:36:96.32:1432,96,0	1/1:0,8:8:24.08:359,24,0
chr10	26701684	.	AT	A	53.67	PASS	AB=0.714;AC=1;AF=0.018;AN=56;BaseQRankSum=1.985;DP=542;FS=11.211;HRun=1;HaplotypeScore=80.5822;InbreedingCoeff=-0.0185;MQ=80.91;MQ0=0;MQRankSum=-3.824;QD=5.37;ReadPosRankSum=0.120;VQSLOD=-0.6858;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:6:18.06:0,18,287	0/0:13,0:13:39.11:0,39,595	0/0:20,0:20:60.15:0,60,866	0/0:17,0:17:48.16:0,48,748	0/0:22,0:22:66.23:0,66,1052	0/0:21,1:22:28.44:0,28,920	0/0:12,0:12:36.12:0,36,569	0/0:30,0:30:84.28:0,84,1321	0/0:22,0:22:66.21:0,66,1028	0/0:25,0:25:75.24:0,75,1158	0/0:15,0:15:45.12:0,45,649	0/0:21,0:21:63.19:0,63,947	0/0:24,0:24:72.24:0,72,1136	0/0:14,0:14:42.14:0,42,668	0/0:18,0:18:54.17:0,54,840	0/0:21,0:21:63.20:0,63,984	0/0:16,0:16:44.98:0,45,647	0/1:6,4:10:99:128,0,181	0/0:25,0:25:75.21:0,75,1103	0/0:23,0:23:69.20:0,69,1076	0/0:21,0:21:63.19:0,63,982	0/0:15,0:15:45.14:0,45,694	0/0:18,0:18:54.18:0,54,861	0/0:12,0:12:36.11:0,36,548	0/0:19,0:19:57.17:0,57,866	0/0:32,0:32:96.33:0,96,1534	0/0:36,0:36:99:0,108,1722	0/0:13,0:13:39.13:0,39,623
chr10	26703366	.	AAAG	A	146.77	PASS	AB=0.955;AC=17;AF=0.315;AN=54;BaseQRankSum=-0.333;DP=260;FS=31.657;HRun=0;HaplotypeScore=97.2925;InbreedingCoeff=0.0390;MQ=36.79;MQ0=16;MQRankSum=-0.251;QD=1.21;ReadPosRankSum=-0.129;VQSLOD=0.2334;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:23,1:20:46.84:47,0,50	0/0:4,0:4:2.98:0,3,25	0/0:10,0:1:0.89:0,1,2	0/0:15,0:3:0:0,0,0	0/0:12,0:11:10.21:0,10,52	0/1:7,0:7:6.49:6,0,23	1/1:7,0:5:4.72:18,5,0	0/1:12,0:8:19.23:19,0,52	0/0:4,0:4:4.82:0,5,35	0/0:13,0:12:7.88:0,8,88	0/1:8,0:6:3.86:4,0,46	0/1:6,1:6:10.96:11,0,46	0/0:9,0:9:6.35:0,6,40	1/1:5,0:4:2:9,2,0	1/1:4,0:4:5.72:29,6,0	0/0:9,0:9:6.86:0,7,63	0/1:11,1:11:10.42:49,0,10	0/1:4,0:4:0:0,0,0	0/1:7,1:8:9.10:64,0,9	0/0:5,0:5:10.54:0,11,62	./.	1/1:5,0:3:2.68:11,3,0	0/0:7,0:5:4.73:0,5,36	0/0:9,0:7:6.92:0,7,37	0/0:17,0:16:0.22:0,0,94	0/0:9,0:7:0.33:0,0,23	0/1:17,1:18:14.54:15,0,63	0/0:13,0:12:20.42:0,20,89
chr10	26703374	.	AAG	A	1711.70	PASS	AC=48;AF=0.923;AN=52;BaseQRankSum=2.570;DP=246;FS=1.558;HRun=0;HaplotypeScore=81.5160;InbreedingCoeff=0.3368;MQ=38.55;MQ0=18;MQRankSum=-1.388;QD=8.69;ReadPosRankSum=1.039;VQSLOD=2.8870;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:21,1:18:19.75:127,20,0	./.	0/0:22,0:1:2.50:0,2,9	0/0:21,0:5:5.09:0,5,20	1/1:9,0:8:7.63:61,8,0	1/1:2,2:4:11.86:101,12,0	1/1:7,0:5:5.87:57,6,0	1/1:10,0:7:12.74:72,13,0	1/1:2,0:2:2.98:21,3,0	1/1:10,0:9:23.25:178,23,0	1/1:7,0:5:5.70:29,6,0	1/1:6,0:5:5.34:25,5,0	1/1:8,0:8:5.12:46,5,0	1/1:5,0:4:8.48:43,8,0	1/1:2,1:3:5.85:51,6,0	1/1:4,1:5:11.67:76,12,0	1/1:9,0:8:5.77:71,6,0	1/1:2,0:2:2.68:11,3,0	1/1:8,0:8:16.68:108,17,0	1/1:5,0:5:8.77:63,9,0	./.	1/1:6,0:4:2.88:15,3,0	1/1:8,0:6:8.69:50,9,0	1/1:8,0:6:5.24:21,5,0	1/1:15,0:14:23.09:161,23,0	1/1:6,3:7:14.88:131,15,0	1/1:13,2:15:12.24:114,12,0	1/1:14,0:12:21.01:179,21,0
chr10	26703375	.	AG	A	2008.57	PASS	AC=50;AF=0.962;AN=52;BaseQRankSum=2.601;DP=249;FS=6.184;HRun=1;HaplotypeScore=78.1118;InbreedingCoeff=0.2692;MQ=38.29;MQ0=19;MQRankSum=0.501;QD=9.17;ReadPosRankSum=1.197;VQSLOD=1.2124;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:18:20.64:165,21,0	./.	1/1:22,1:1:1.55:4,2,0	0/0:24,1:5:5.09:0,5,20	1/1:7,2:8:8.12:84,8,0	1/1:3,1:4:11.95:101,12,0	1/1:7,0:5:5.82:36,6,0	1/1:9,1:7:12.77:81,13,0	1/1:2,0:2:2.98:21,3,0	1/1:8,2:9:23.87:208,24,0	1/1:6,1:5:5.95:44,6,0	1/1:6,0:5:5.98:46,6,0	1/1:1,7:8:2.83:59,3,0	1/1:5,0:4:8.80:68,9,0	1/1:3,0:3:5.99:49,6,0	1/1:5,0:5:14.37:92,14,0	1/1:7,2:8:5.79:61,6,0	1/1:2,0:2:2.22:7,2,0	1/1:7,1:8:16.48:130,16,0	1/1:3,2:5:9:87,9,0	./.	1/1:6,0:4:2.90:16,3,0	1/1:7,1:6:8.94:66,9,0	1/1:7,0:6:5.78:31,6,0	1/1:10,5:14:23.47:199,23,0	1/1:8,1:7:14.76:120,15,0	1/1:13,1:14:11.99:109,12,0	1/1:12,2:12:21.06:217,21,0
chr10	26703389	.	A	AGG	3612.66	PASS	AB=1.000;AC=48;AF=0.889;AN=54;BaseQRankSum=4.201;DP=272;FS=8.237;HRun=0;HaplotypeScore=120.4783;InbreedingCoeff=0.1501;MQ=51.29;MQ0=15;MQRankSum=-1.522;QD=13.43;ReadPosRankSum=4.071;VQSLOD=3.0462;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:24:22.06:285,22,0	1/1:4,0:4:3.01:49,3,0	0/1:35,0:4:10.48:10,0,31	0/1:29,0:8:3.56:4,0,73	1/1:6,0:6:11.55:153,12,0	1/1:5,1:6:12.91:178,13,0	1/1:7,0:6:9.03:106,9,0	1/1:6,4:7:17.89:166,18,0	1/1:5,0:5:6.02:72,6,0	1/1:8,0:8:20.90:266,21,0	1/1:11,0:10:12.04:165,12,0	0/1:7,0:6:8.74:76,0,9	1/1:4,0:4:6.90:73,7,0	1/1:4,2:6:16.23:179,16,0	1/1:3,0:3:4.26:46,4,0	1/1:5,1:6:17.92:202,18,0	1/1:10,0:9:11.70:95,12,0	0/0:2,0:2:2.80:0,3,13	0/1:6,0:6:0.02:68,0,0	1/1:4,0:4:8.86:86,9,0	./.	1/1:4,0:4:3.01:36,3,0	1/1:8,0:8:8.98:126,9,0	1/1:10,0:8:9.03:121,9,0	1/1:15,0:14:21.51:327,22,0	1/1:11,0:9:17.74:207,18,0	1/1:15,0:15:8.15:53,8,0	1/1:12,0:11:31.35:463,31,0
chr10	26703392	.	G	GGAAA	5940.79	PASS	AB=1.000;AC=49;AF=0.907;AN=54;BaseQRankSum=3.803;DP=250;FS=6.270;HRun=0;HaplotypeScore=127.0090;InbreedingCoeff=0.5350;MQ=52.96;MQ0=14;MQRankSum=-3.165;QD=31.94;ReadPosRankSum=2.829;VQSLOD=4.5159;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,14:22:27.07:487,27,0	1/1:0,3:4:3.01:69,3,0	0/0:35,0:4:6.74:0,7,54	0/0:28,0:8:10.78:0,11,113	1/1:6,0:6:15.02:239,15,0	1/1:6,0:6:15.05:267,15,0	1/1:0,6:6:9.03:222,9,0	1/1:8,0:5:12.04:219,12,0	1/1:0,5:5:6.02:152,6,0	1/1:7,0:7:21.07:370,21,0	1/1:2,9:10:12.04:261,12,0	1/1:2,2:4:9.01:106,9,0	1/1:3,0:3:6.91:113,7,0	1/1:4,2:6:18.06:401,18,0	1/1:1,1:3:6.02:110,6,0	1/1:5,1:6:18.04:322,18,0	1/1:2,4:8:9.03:159,9,0	0/1:2,0:2:0:0,0,0	1/1:5,0:5:12.04:211,12,0	1/1:4,0:4:9.03:127,9,0	./.	1/1:0,2:3:3.01:76,3,0	1/1:3,5:8:11.91:178,12,0	1/1:3,4:6:9.50:190,10,0	1/1:11,1:11:30.10:539,30,0	1/1:6,5:9:21.07:407,21,0	1/1:4,10:15:9.03:145,9,0	1/1:12,0:11:33.11:572,33,0
chr10	26707194	.	A	AG	20884.52	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-7.349;DP=560;FS=2.866;HRun=0;HaplotypeScore=49.2789;InbreedingCoeff=0.9948;MQ=73.46;MQ0=0;MQRankSum=-7.935;QD=39.11;ReadPosRankSum=4.509;VQSLOD=5.0188;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,10:10:24.08:359,24,0	1/1:1,9:10:23.97:358,24,0	0/0:14,0:14:32.57:0,33,396	0/0:12,0:12:33.09:0,33,418	1/1:0,30:30:81.10:1152,81,0	1/1:0,21:21:51.17:763,51,0	1/1:0,9:9:27.09:404,27,0	1/1:1,33:34:99:1377,99,0	1/1:0,13:13:36.12:537,36,0	1/1:0,28:28:78.20:1123,78,0	1/1:0,19:19:54.11:779,54,0	1/1:0,17:17:45.07:673,45,0	1/1:1,22:23:51.17:763,51,0	1/1:1,23:24:63.21:943,63,0	1/1:0,25:25:66.22:988,66,0	1/1:0,22:22:57.19:853,57,0	1/1:0,9:9:21.07:314,21,0	1/1:0,16:16:39.13:582,39,0	1/1:0,16:16:48.16:719,48,0	1/1:0,28:28:72.24:1074,72,0	1/1:0,17:17:42.14:628,42,0	1/1:0,21:21:44.98:613,45,0	1/1:0,25:25:69.15:1003,69,0	1/1:0,17:17:45.15:674,45,0	1/1:0,23:23:66.17:958,66,0	1/1:0,23:23:69.16:967,69,0	1/1:0,39:40:99:1696,114,0	1/1:0,14:14:39.13:583,39,0
chr10	26707522	.	GC	G	2783.09	PASS	AB=0.550;AC=42;AF=0.840;AN=50;BaseQRankSum=5.263;DP=227;FS=0.000;HRun=1;HaplotypeScore=192.6645;InbreedingCoeff=0.0136;MQ=29.63;MQ0=0;MQRankSum=-1.367;QD=12.42;ReadPosRankSum=6.483;VQSLOD=2.3597;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,2:2:2.96:19,3,0	0/1:1,3:4:8.12:46,0,8	./.	./.	0/1:2,10:12:5.20:96,0,5	0/1:0,9:9:12.25:90,0,12	1/1:1,5:6:14.78:96,15,0	0/1:6,15:21:43.19:194,0,43	1/1:1,10:11:29.58:194,30,0	1/1:1,10:11:9.05:141,9,0	1/1:3,6:9:14.80:98,15,0	1/1:1,5:6:11.81:76,12,0	1/1:2,10:12:26.64:176,27,0	1/1:1,8:9:17.78:119,18,0	1/1:1,9:10:26.60:173,27,0	1/1:2,18:20:50.22:324,50,0	1/1:1,2:3:5.91:38,6,0	1/1:0,2:2:5.87:35,6,0	0/1:2,4:6:23.27:51,0,23	1/1:1,9:10:8.71:140,9,0	0/0:0,3:3:4.76:0,5,23	1/1:2,7:9:14.84:101,15,0	0/1:0,13:13:4.21:138,0,4	1/1:0,4:4:6.37:41,6,0	1/1:5,7:12:23.49:147,23,0	1/1:0,14:14:40.95:242,41,0	1/1:0,9:9:20.69:135,21,0	./.
chr10	26709121	.	A	AT	12157.33	PASS	AB=0.559;AC=49;AF=0.875;AN=56;BaseQRankSum=-9.680;DP=477;FS=0.000;HRun=8;HaplotypeScore=45.6731;InbreedingCoeff=0.7523;MQ=72.02;MQ0=0;MQRankSum=-4.008;QD=28.21;ReadPosRankSum=-0.024;VQSLOD=4.9052;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,8:10:27.08:310,27,0	1/1:0,4:4:12.04:138,12,0	0/0:12,0:11:20.89:0,21,173	0/0:5,0:5:3:0,3,28	1/1:3,31:34:81.24:935,81,0	1/1:2,22:23:63.19:727,63,0	1/1:1,12:13:36.11:415,36,0	1/1:7,26:33:75.20:846,75,0	1/1:2,8:10:21.06:242,21,0	1/1:5,14:20:44.97:499,45,0	1/1:3,25:28:47.76:803,48,0	1/1:3,15:18:45.13:519,45,0	1/1:2,22:24:32.96:599,33,0	1/1:0,9:9:27.08:312,27,0	0/0:1,0:29:55:0,55,162	1/1:1,17:18:51.15:589,51,0	1/1:1,8:9:24.07:277,24,0	1/1:5,13:18:33.10:379,33,0	0/1:4,15:19:3.80:451,0,4	1/1:0,24:24:72.11:800,72,0	1/1:1,8:9:24.07:276,24,0	1/1:2,10:12:30.09:346,30,0	1/1:1,16:17:48.14:554,48,0	1/1:0,1:1:3.01:35,3,0	1/1:1,16:17:39.12:450,39,0	1/1:0,24:24:72.20:820,72,0	1/1:4,22:26:55.98:628,56,0	1/1:0,10:10:17.62:207,18,0
chr10	26712066	.	GACAC	G	3683.05	PASS	AB=0.828;AC=45;AF=0.865;AN=52;BaseQRankSum=-4.473;DP=634;FS=7.261;HRun=0;HaplotypeScore=121.4940;InbreedingCoeff=-0.0391;MQ=54.73;MQ0=25;MQRankSum=2.159;QD=6.62;ReadPosRankSum=2.565;VQSLOD=2.1494;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:32,0:31:3.49:187,3,0	1/1:3,3:6:2.45:46,2,0	./.	./.	0/1:15,13:28:11.91:129,0,12	1/1:17,2:25:15.04:211,15,0	0/0:18,5:23:2.37:0,2,8	1/1:27,0:24:3.72:40,4,0	1/1:17,0:17:15.93:212,16,0	0/1:25,0:25:20.57:335,0,21	0/1:14,11:25:7.63:134,0,8	1/1:8,12:20:3.23:26,3,0	1/1:14,10:24:18.69:235,19,0	1/1:7,5:13:7.86:89,8,0	1/1:15,0:27:5.20:55,5,0	1/1:8,7:16:7.86:120,8,0	1/1:20,12:31:17.76:234,18,0	0/1:8,0:8:4.93:34,0,5	1/1:13,1:14:5.98:74,6,0	1/1:17,4:21:5.91:62,6,0	1/1:49,2:47:29.90:345,30,0	1/1:15,0:15:15.05:228,15,0	1/1:11,8:19:3.01:47,3,0	1/1:14,18:29:12.04:188,12,0	1/1:13,5:17:8.92:110,9,0	0/1:22,10:31:0.08:256,0,0	1/1:7,9:16:10.25:225,10,0	1/1:11,0:10:6.72:60,7,0
chr10	26712210	.	TAGACATC	T	453.08	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.091;DP=558;FS=2.861;HRun=0;HaplotypeScore=127.7945;InbreedingCoeff=0.9881;MQ=78.75;MQ0=0;MQRankSum=-3.877;QD=45.31;ReadPosRankSum=1.006;VQSLOD=3.4421;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:84.29:0,84,3373	0/0:8,0:8:24.07:0,24,885	0/0:16,0:16:45.15:0,45,1555	0/0:11,0:11:33.11:0,33,1171	0/0:28,0:28:84.27:0,84,3280	0/0:23,0:23:69.24:0,69,2765	0/0:17,0:17:51.18:0,51,2021	0/0:37,0:37:99:0,108,4222	0/0:13,0:13:39.13:0,39,1593	0/0:36,0:35:99:0,108,4273	0/0:22,0:22:66.18:0,66,2492	0/0:19,0:18:54.17:0,54,2019	0/0:28,0:28:84.29:0,84,3369	0/0:23,0:23:69.24:0,69,2797	1/1:3,7:10:27.09:547,27,0	0/0:10,0:10:30.10:0,30,1233	0/0:21,0:21:60.21:0,60,2389	0/0:16,0:16:48.16:0,48,1831	0/0:25,0:25:72.25:0,72,2848	0/0:22,0:22:66.23:0,66,2713	0/0:15,0:15:45.15:0,45,1859	0/0:16,0:16:48.16:0,48,1938	0/0:28,0:28:84.29:0,84,3458	0/0:12,0:12:36.12:0,36,1475	0/0:20,0:20:60.21:0,60,2403	0/0:21,0:21:63.22:0,63,2559	0/0:26,0:26:78.27:0,78,3153	0/0:6,0:6:18.06:0,18,723
chr10	26712221	.	CTAATGTCTTTAATTTT	C	813.53	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.547;DP=541;FS=3.418;HRun=0;HaplotypeScore=226.2611;InbreedingCoeff=0.9904;MQ=77.25;MQ0=0;MQRankSum=-4.272;QD=116.22;ReadPosRankSum=1.862;VQSLOD=3.6881;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:75.26:0,75,5727	0/0:10,0:10:30.10:0,30,2289	0/0:12,0:12:36.12:0,36,1874	0/0:13,0:13:35.91:0,36,1984	0/0:25,0:25:75.26:0,75,5442	0/0:20,0:20:60.19:0,60,4274	0/0:16,0:16:48.16:0,48,3508	0/0:35,0:35:99:0,102,6589	0/0:13,0:13:39.12:0,39,2828	0/0:37,0:36:99:0,111,7995	0/0:18,0:18:54.19:0,54,4039	0/0:15,0:14:42.14:0,42,3335	0/0:28,0:28:84.29:0,84,6202	0/0:23,0:23:69.24:0,69,4940	1/1:0,7:7:21.07:906,21,0	0/0:12,0:12:36.12:0,36,2805	0/0:21,0:21:63.22:0,63,4391	0/0:17,0:17:48.12:0,48,3223	0/0:27,0:27:81.26:0,81,4999	0/0:20,0:20:60.18:0,60,4186	0/0:18,0:18:54.19:0,54,3857	0/0:16,0:16:48.16:0,48,3421	0/0:30,0:30:90.30:0,90,6629	0/0:10,0:10:30.10:0,30,2230	0/0:19,0:19:57.20:0,57,4275	0/0:22,0:22:66.21:0,66,4853	0/0:24,0:24:72.25:0,72,5518	0/0:8,0:7:21.04:0,21,1165
chr10	26712610	.	CACACA	C	205.74	PASS	AB=1.000;AC=6;AF=0.107;AN=56;BaseQRankSum=0.465;DP=657;FS=5.079;HRun=0;HaplotypeScore=165.2992;InbreedingCoeff=0.2748;MQ=59.84;MQ0=11;MQRankSum=3.959;QD=1.61;ReadPosRankSum=-4.042;VQSLOD=1.2290;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:44.96:0,45,1111	0/0:11,0:10:23.71:0,24,442	0/0:23,0:13:36.45:0,36,452	0/0:25,0:11:33.10:0,33,458	0/1:35,0:34:12.66:13,0,941	0/0:35,0:35:28.88:0,29,1392	0/1:23,0:23:16.59:17,0,429	0/0:28,0:28:43.64:0,44,1207	0/0:15,0:15:33.96:0,34,782	0/0:27,0:27:33.46:0,33,1160	0/0:29,0:29:36.60:0,37,785	0/0:15,0:15:27.08:0,27,622	0/0:23,0:23:29.90:0,30,594	0/0:19,0:18:12.04:0,12,293	1/1:16,8:24:21.40:281,21,0	0/0:29,0:29:47.28:0,47,1160	0/1:19,0:19:1.78:2,0,277	0/0:12,0:12:17.98:0,18,369	0/0:22,0:21:22.92:0,23,708	0/1:27,0:26:14.64:15,0,568	0/0:26,0:25:36.12:0,36,950	0/0:18,0:17:30.65:0,31,689	0/0:17,0:17:25.94:0,26,618	0/0:29,0:28:51.06:0,51,1406	0/0:33,0:33:27.43:0,27,742	0/0:20,0:20:28.95:0,29,870	0/0:35,0:35:29.95:0,30,620	0/0:3,0:3:9.03:0,9,197
chr10	26712616	.	C	CACAT	9646.37	PASS	AB=0.583;AC=42;AF=0.750;AN=56;BaseQRankSum=-4.184;DP=638;FS=6.130;HRun=0;HaplotypeScore=137.1057;InbreedingCoeff=-0.0123;MQ=64.57;MQ0=6;MQRankSum=0.827;QD=16.10;ReadPosRankSum=-1.712;VQSLOD=4.0771;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:4,0:33:26.47:542,0,26	1/1:1,0:8:11.83:205,12,0	0/0:19,0:14:35.82:0,36,327	0/0:20,0:11:30.03:0,30,307	1/1:3,1:36:4.33:465,4,0	1/1:8,0:33:18.01:428,18,0	0/1:4,0:20:3.18:125,0,3	1/1:7,0:22:59.94:629,60,0	1/1:1,0:13:2.56:224,3,0	1/1:2,0:32:72.28:818,72,0	1/1:5,0:25:1:361,1,0	1/1:0,0:15:18.06:384,18,0	0/1:4,0:21:30.31:275,0,30	0/1:1,0:18:11.33:53,0,11	1/1:16,0:25:9.22:326,9,0	0/1:4,0:31:5.94:689,0,6	1/1:0,0:18:17.91:232,18,0	0/1:2,1:15:10.27:179,0,10	1/1:5,0:25:18.51:574,19,0	1/1:3,0:22:35.70:452,36,0	0/1:4,0:23:99:359,0,107	0/1:3,0:17:46.24:224,0,46	1/1:1,0:18:1.92:407,2,0	0/1:2,0:26:42.91:395,0,43	1/1:5,0:33:3.16:370,3,0	1/1:3,0:23:55.52:541,56,0	1/1:1,0:36:13.39:321,13,0	0/1:5,0:5:7.25:69,0,7
chr10	26713222	.	C	CT	15517.46	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-5.679;DP=619;FS=13.323;HRun=9;HaplotypeScore=57.6703;InbreedingCoeff=0.9749;MQ=72.46;MQ0=0;MQRankSum=-5.424;QD=26.21;ReadPosRankSum=2.087;VQSLOD=4.4870;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,16:20:39.11:431,39,0	1/1:0,9:9:24.06:266,24,0	0/0:16,0:16:29.01:0,29,237	0/0:11,0:11:12.46:0,12,105	1/1:3,26:29:75.12:803,75,0	1/1:3,22:25:54.15:597,54,0	1/1:2,17:19:51.14:564,51,0	1/1:4,33:37:99:1063,99,0	1/1:4,23:27:63.17:697,63,0	1/1:5,24:29:49.15:770,49,0	1/1:4,27:31:58.13:857,58,0	1/1:3,24:27:34.11:605,34,0	1/1:2,21:23:57.15:631,57,0	1/1:4,16:20:45.12:498,45,0	1/1:2,24:27:69.02:744,69,0	1/1:5,20:25:60.16:664,60,0	1/1:3,13:17:41.95:446,42,0	1/1:3,10:13:27.03:285,27,0	1/1:4,16:20:51.13:556,51,0	1/1:3,21:25:63:678,63,0	1/1:4,6:10:15.04:166,15,0	1/1:1,16:17:45.12:496,45,0	1/1:7,28:35:75.20:830,75,0	1/1:6,12:18:39.03:405,39,0	1/1:3,24:27:72.19:796,72,0	1/1:4,23:27:69.17:753,69,0	1/1:3,21:24:54.12:586,54,0	1/1:0,11:11:30.08:332,30,0
chr10	26713517	.	TAC	T	743.75	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.895;DP=705;FS=2.768;HRun=0;HaplotypeScore=114.5635;InbreedingCoeff=0.9829;MQ=69.14;MQ0=0;MQRankSum=0.107;QD=26.56;ReadPosRankSum=0.773;VQSLOD=4.9043;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:57.18:0,57,947	0/0:12,0:12:33.11:0,33,566	0/0:21,0:17:45.07:0,45,650	0/0:13,0:10:15.23:0,15,275	0/0:30,0:30:87.30:0,87,1485	0/0:40,0:40:99:0,108,1822	0/0:16,0:16:45.13:0,45,750	0/0:49,0:49:99:0,114,1859	0/0:24,0:24:60.18:0,60,999	0/0:31,0:31:84.26:0,84,1350	0/0:24,0:24:69.22:0,69,1146	0/0:21,0:21:60.21:0,60,1033	0/0:34,0:34:93.29:0,93,1546	0/0:29,0:29:84.25:0,84,1398	1/1:2,26:28:63.21:839,63,0	0/0:27,0:27:78.25:0,78,1320	0/0:22,0:22:60.21:0,60,1033	0/0:17,0:17:48.16:0,48,824	0/0:21,0:21:45.15:0,45,772	0/0:33,0:33:85.50:0,85,1398	0/0:24,0:24:66.20:0,66,1095	0/0:25,0:25:75.23:0,75,1234	0/0:35,0:35:93.32:0,93,1568	0/0:21,0:21:51.17:0,51,871	0/0:24,0:24:69.20:0,69,1134	0/0:21,0:21:63.22:0,63,1087	0/0:34,0:34:81.24:0,81,1371	0/0:9,0:9:24.08:0,24,415
chr10	26715241	.	TATATATATATAG	T	19060.59	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-7.371;DP=519;FS=2.847;HRun=0;HaplotypeScore=157.6468;InbreedingCoeff=0.5948;MQ=72.10;MQ0=11;MQRankSum=-3.638;QD=50.56;ReadPosRankSum=5.401;VQSLOD=4.5554;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,11:11:21.07:735,21,0	1/1:0,10:10:8.90:314,9,0	0/0:46,0:20:14.72:0,15,210	0/0:92,0:32:31.81:0,32,367	1/1:1,9:9:5.99:203,6,0	1/1:2,21:23:33.11:1206,33,0	1/1:2,6:8:6.02:225,6,0	1/1:1,57:58:99:3328,168,0	1/1:0,8:8:3.01:113,3,0	1/1:1,26:27:75.22:2208,75,0	1/1:0,14:14:11.49:436,11,0	1/1:0,13:13:24.08:867,24,0	1/1:1,15:16:33.11:1157,33,0	1/1:1,13:14:15.05:535,15,0	1/1:14,0:14:9.03:142,9,0	1/1:1,8:9:12.04:429,12,0	1/1:1,17:18:9.03:249,9,0	1/1:2,8:10:12.01:449,12,0	1/1:1,10:11:27.08:587,27,0	1/1:1,12:13:21.07:734,21,0	1/1:0,7:7:2.91:101,3,0	1/1:0,5:5:3.01:113,3,0	1/1:1,6:7:6.02:214,6,0	0/0:0,4:4:0.47:0,0,1	1/1:0,17:17:39.13:1369,39,0	1/1:1,19:20:51.08:1339,51,0	1/1:0,23:23:33.11:1159,33,0	1/1:1,10:10:24.08:849,24,0
chr10	26715243	.	TATATATATAG	T	11722.06	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-3.277;DP=510;FS=0.782;HRun=0;HaplotypeScore=170.6543;InbreedingCoeff=0.5828;MQ=72.51;MQ0=11;MQRankSum=-4.362;QD=31.77;ReadPosRankSum=6.805;VQSLOD=3.9958;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:11:21.07:468,21,0	1/1:10,0:10:8.89:200,9,0	0/0:45,0:20:27.97:0,28,249	0/0:92,0:32:33.05:0,33,390	1/1:10,0:9:5.99:126,6,0	1/1:22,0:22:33.11:786,33,0	1/1:6,0:6:6.02:149,6,0	1/1:57,0:57:99:1668,123,0	1/1:8,0:8:3.01:75,3,0	1/1:26,0:26:58.71:1331,59,0	1/1:14,0:14:11.57:284,12,0	1/1:13,0:13:24.08:562,24,0	1/1:16,0:16:33.11:738,33,0	1/1:14,0:14:15.05:344,15,0	1/1:1,13:14:9.03:292,9,0	1/1:9,0:9:12.04:276,12,0	1/1:17,0:17:4.66:135,5,0	1/1:8,0:8:12.04:297,12,0	1/1:11,0:11:15.01:300,15,0	1/1:13,0:13:24.07:492,24,0	1/1:7,0:7:2.90:64,3,0	1/1:5,0:5:3.01:74,3,0	1/1:7,0:7:6.02:138,6,0	0/0:4,0:4:0.47:0,0,1	1/1:17,0:17:39.13:872,39,0	1/1:20,0:20:34.53:770,35,0	1/1:23,0:23:33.11:740,33,0	1/1:11,0:10:24.08:544,24,0
chr10	26716335	.	C	CAGAT	4650.92	PASS	AB=0.986;AC=30;AF=0.536;AN=56;BaseQRankSum=6.106;DP=694;FS=0.000;HRun=0;HaplotypeScore=257.6562;InbreedingCoeff=-0.3191;MQ=48.22;MQ0=4;MQRankSum=-5.701;QD=7.99;ReadPosRankSum=2.999;VQSLOD=3.5538;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:30:23.16:99,0,23	0/1:5,0:5:18.51:32,0,19	0/0:34,0:24:62.57:0,63,1022	0/0:21,0:13:21.11:0,21,530	1/1:24,0:24:2.54:82,3,0	0/1:26,0:26:16.71:240,0,17	0/0:17,0:17:3.76:0,4,29	0/1:35,0:35:71.94:164,0,72	1/1:24,0:24:14.48:130,14,0	0/1:31,0:32:26.89:503,0,27	0/1:24,0:24:25.73:157,0,26	0/1:18,0:18:58.23:59,0,58	0/1:33,0:33:34.31:468,0,34	0/1:27,0:28:29.22:284,0,29	0/0:40,0:40:78.27:0,78,1410	0/1:22,0:22:37.77:187,0,38	0/1:25,0:24:38.81:155,0,39	0/1:21,0:21:51.99:52,0,108	0/1:15,0:15:67.93:68,0,69	0/1:31,0:31:52.92:139,0,53	0/1:25,0:25:1.22:65,0,1	1/1:22,0:22:0.91:211,1,0	0/1:27,0:27:15.46:129,0,15	1/1:15,0:15:9.57:162,10,0	1/1:27,0:27:27.53:399,28,0	0/1:32,0:32:80.20:297,0,80	0/1:19,7:26:1.64:352,0,2	1/1:15,0:15:18.66:218,19,0
chr10	26716343	.	T	TACATAC	15918.59	PASS	AB=1.000;AC=48;AF=0.857;AN=56;BaseQRankSum=-0.026;DP=724;FS=2.805;HRun=0;HaplotypeScore=257.8684;InbreedingCoeff=0.6952;MQ=46.93;MQ0=5;MQRankSum=1.454;QD=25.27;ReadPosRankSum=1.486;VQSLOD=4.0465;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:32,0:32:17:415,17,0	1/1:4,0:4:9:149,9,0	0/0:30,0:20:54.17:0,54,1140	0/0:23,0:12:36.11:0,36,759	1/1:28,0:28:19.90:408,20,0	1/1:26,0:26:42.88:803,43,0	1/1:18,0:18:17.20:217,17,0	1/1:32,0:31:71.97:894,72,0	1/1:28,0:28:43.28:593,43,0	1/1:31,0:31:57.01:1416,57,0	1/1:23,0:23:32.52:477,33,0	0/1:22,0:22:5.48:323,0,5	1/1:31,0:31:71.39:1160,71,0	1/1:29,0:29:41.93:853,42,0	0/0:41,0:41:78.14:0,78,1672	1/1:21,0:21:21.87:668,22,0	1/1:27,0:25:24.80:724,25,0	0/1:21,0:21:52.92:238,0,53	1/1:12,0:12:28.77:462,29,0	1/1:14,19:37:12.03:319,12,0	1/1:27,0:27:40.65:428,41,0	1/1:25,0:25:37.88:728,38,0	1/1:31,0:31:27.29:469,27,0	1/1:14,0:14:18.04:333,18,0	1/1:29,0:29:66.08:1170,66,0	1/1:41,0:41:10.23:1117,10,0	1/1:25,0:25:50.99:896,51,0	1/1:15,0:16:41.98:660,42,0
chr10	26716344	.	A	AC	2839.85	PASS	AB=0.805;AC=37;AF=0.661;AN=56;BaseQRankSum=7.353;DP=711;FS=23.564;HRun=0;HaplotypeScore=242.2379;InbreedingCoeff=-0.1005;MQ=45.85;MQ0=6;MQRankSum=4.200;QD=4.61;ReadPosRankSum=-0.020;VQSLOD=1.6462;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:25,6:31:11.79:59,0,12	1/1:3,1:4:3.14:23,3,0	0/0:29,0:19:57.17:0,57,744	0/0:24,0:12:36.11:0,36,477	1/1:23,5:28:0.94:76,1,0	1/1:16,10:26:14.65:201,15,0	1/1:12,5:17:5.17:60,5,0	0/1:31,1:31:17.24:152,0,17	1/1:18,10:28:6.04:99,6,0	0/1:21,10:31:33.76:207,0,34	1/1:14,7:21:13.42:110,13,0	0/1:17,5:22:9.14:56,0,9	0/1:21,11:32:7.03:197,0,7	0/1:16,12:28:12.14:144,0,12	0/0:42,0:42:78.19:0,78,963	1/1:13,8:21:4.78:136,5,0	0/1:20,6:24:48.06:101,0,48	0/1:18,2:20:14.18:14,0,64	0/1:10,3:13:21.09:54,0,21	1/1:21,9:30:11.05:91,11,0	1/1:25,2:27:1.71:86,2,0	1/1:14,11:25:31.15:211,31,0	0/1:16,14:30:6.88:72,0,7	1/1:7,7:14:15.38:109,15,0	1/1:22,7:29:47.77:323,48,0	0/1:34,6:40:99:175,0,144	0/1:17,8:25:11.70:167,0,12	0/1:12,4:16:9.90:83,0,10
chr10	26716345	.	A	ATACAC	7429.68	PASS	AB=0.806;AC=36;AF=0.643;AN=56;BaseQRankSum=2.487;DP=726;FS=45.963;HRun=0;HaplotypeScore=270.8964;InbreedingCoeff=-0.1294;MQ=45.59;MQ0=6;MQRankSum=4.370;QD=11.77;ReadPosRankSum=1.324;VQSLOD=2.3864;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:29,2:35:7.06:207,0,7	1/1:4,1:5:2.96:72,3,0	0/0:28,0:19:54.17:0,54,718	0/0:24,0:12:36.09:0,36,460	0/1:24,3:29:19.52:155,0,20	0/1:18,6:28:10.30:387,0,10	0/1:14,2:19:13.81:84,0,14	0/1:32,0:32:68.01:90,0,68	0/1:20,7:30:7.49:216,0,7	0/1:22,8:32:15.10:725,0,15	1/1:14,3:21:12.42:200,12,0	0/1:16,3:22:10.55:128,0,11	1/1:21,4:32:8.19:582,8,0	0/1:15,7:27:30.30:384,0,30	0/0:13,0:42:75.17:0,75,1117	1/1:13,6:21:3.97:430,4,0	0/1:20,6:24:69.13:295,0,69	0/1:19,0:21:9.09:9,0,103	0/1:12,2:15:0.41:234,0,0	1/1:21,4:30:15.01:213,15,0	1/1:24,0:26:1.60:160,2,0	1/1:15,5:26:7.94:372,8,0	1/1:16,9:30:2.95:310,3,0	0/1:7,1:14:8.82:61,0,9	1/1:22,3:29:7.05:588,7,0	0/1:33,4:39:99:612,0,112	1/1:17,4:25:8.62:565,9,0	1/1:12,3:16:9.68:348,10,0
chr10	26716690	.	AT	A	14104.41	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=4.237;DP=630;FS=3.405;HRun=8;HaplotypeScore=85.9280;InbreedingCoeff=0.9825;MQ=74.66;MQ0=0;MQRankSum=-2.821;QD=24.62;ReadPosRankSum=1.167;VQSLOD=5.5321;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,18:21:51.08:492,51,0	1/1:1,8:9:21.03:203,21,0	0/0:17,0:17:39.12:0,39,468	0/0:13,0:13:12.12:0,12,274	1/1:1,29:30:81.12:781,81,0	1/1:2,23:25:60.10:579,60,0	1/1:2,21:23:51.08:493,51,0	1/1:2,35:37:99:984,102,0	1/1:1,25:26:72.11:695,72,0	1/1:3,28:31:75.11:724,75,0	1/1:3,20:23:57.09:550,57,0	1/1:4,21:25:54.08:522,54,0	1/1:1,26:27:63.10:608,63,0	1/1:0,19:19:51.08:492,51,0	0/0:27,0:27:81.25:0,81,979	1/1:1,23:24:63.10:608,63,0	1/1:1,14:15:39.06:377,39,0	1/1:2,8:10:24.04:232,24,0	1/1:2,22:24:66.10:637,66,0	1/1:3,32:35:93.15:897,93,0	1/1:1,12:13:36.06:348,36,0	1/1:2,23:25:63.10:607,63,0	1/1:1,24:25:69.11:666,69,0	1/1:2,8:10:21.03:203,21,0	1/1:3,29:32:75.12:724,75,0	1/1:0,30:30:90.15:869,90,0	1/1:2,24:26:66.10:637,66,0	1/1:2,6:8:18.03:174,18,0
chr10	26717724	.	TTG	T	20966.85	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=5.522;DP=553;FS=0.497;HRun=0;HaplotypeScore=150.0243;InbreedingCoeff=0.9737;MQ=88.95;MQ0=0;MQRankSum=-10.213;QD=43.86;ReadPosRankSum=4.936;VQSLOD=5.4898;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,29:29:75.21:1192,75,0	1/1:0,3:3:9.03:147,9,0	0/0:25,0:25:53.84:0,54,1111	0/0:32,0:32:80.39:0,80,1428	1/1:0,23:23:63.21:1025,63,0	1/1:0,25:25:75.26:1221,75,0	1/1:0,21:21:54.05:791,54,0	1/1:0,31:31:93.23:1404,93,0	1/1:0,24:24:66.23:1074,66,0	1/1:0,24:24:72.24:1148,72,0	1/1:2,12:14:41.95:558,42,0	1/1:0,19:19:51.17:830,51,0	1/1:0,25:25:72.25:1169,72,0	1/1:0,12:12:33.11:536,33,0	0/0:18,0:18:48.16:0,48,956	1/1:0,31:31:84.29:1367,84,0	1/1:0,16:16:45.11:703,45,0	1/1:0,10:10:30.10:488,30,0	1/1:0,18:18:54.14:800,54,0	1/1:0,23:23:63.22:1026,63,0	1/1:0,13:12:33.11:538,33,0	1/1:1,17:18:45.15:717,45,0	1/1:0,16:16:39.09:606,39,0	1/1:0,18:18:51.17:829,51,0	1/1:0,16:16:39.13:635,39,0	1/1:0,18:18:51.15:795,51,0	1/1:0,26:26:69.24:1122,69,0	1/1:0,5:5:15.05:244,15,0
chr10	26717755	.	GCTCTCTCT	G	12051.80	PASS	AB=0.720;AC=49;AF=0.875;AN=56;BaseQRankSum=-0.846;DP=539;FS=15.238;HRun=0;HaplotypeScore=234.5305;InbreedingCoeff=0.4307;MQ=70.83;MQ0=15;MQRankSum=-4.842;QD=29.11;ReadPosRankSum=5.304;VQSLOD=2.9909;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:12,7:19:17.96:269,18,0	1/1:1,2:3:6.02:125,6,0	0/0:45,0:22:14.73:0,15,491	0/0:77,0:38:48.91:0,49,738	1/1:9,7:16:8.79:180,9,0	1/1:10,9:19:23.82:379,24,0	0/1:17,4:21:7.95:254,0,8	1/1:25,4:29:57.07:1021,57,0	1/1:6,8:14:6.66:267,7,0	1/1:14,9:23:51.10:1064,51,0	1/1:3,9:12:18.03:338,18,0	1/1:6,12:18:33.08:677,33,0	1/1:10,12:22:50.95:932,51,0	1/1:7,5:12:18.04:365,18,0	0/1:8,0:17:31.38:217,0,31	1/1:11,11:22:36.10:812,36,0	1/1:9,9:18:27.01:569,27,0	1/1:5,3:8:12:256,12,0	1/1:9,2:9:17.79:295,18,0	0/1:8,8:16:6.70:283,0,7	1/1:10,0:9:6:73,6,0	1/1:5,10:15:27.09:605,27,0	1/1:8,8:16:20.25:365,20,0	1/1:7,4:11:5.99:120,6,0	1/1:5,11:16:21.06:497,21,0	1/1:4,12:16:45.13:1046,45,0	1/1:13,10:23:33.03:655,33,0	1/1:2,5:5:15.05:388,15,0
chr10	26717778	.	CTA	C	1016.37	PASS	AB=0.990;AC=22;AF=0.393;AN=56;BaseQRankSum=4.116;DP=634;FS=0.497;HRun=0;HaplotypeScore=230.7301;InbreedingCoeff=-0.5388;MQ=56.03;MQ0=26;MQRankSum=-2.817;QD=2.85;ReadPosRankSum=0.088;VQSLOD=2.3027;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:17,0:17:16.49:32,0,16	0/1:8,0:8:14.76:15,0,19	0/0:77,0:19:16.61:0,17,299	0/0:128,0:33:26.31:0,26,364	0/0:13,0:13:4.77:0,5,30	0/1:17,0:17:16.35:16,0,60	0/1:16,1:17:31.97:97,0,32	0/1:31,4:35:99:229,0,371	0/1:13,0:13:19.40:20,0,19	0/1:24,1:25:41.71:42,0,148	0/0:17,0:16:3.10:0,3,17	0/1:19,0:19:50.43:72,0,50	0/1:18,0:18:6.99:97,0,7	0/1:13,0:13:45.92:46,0,48	1/1:14,0:14:12.56:72,13,0	0/1:22,0:22:31.45:31,0,97	0/1:20,0:20:43.74:44,0,76	0/0:11,0:11:1.60:0,2,89	0/1:13,0:10:56.87:57,0,74	0/0:13,0:13:0.20:0,0,12	0/1:8,0:7:16.34:16,0,38	0/1:15,0:15:13.78:47,0,14	0/1:16,0:16:11.30:11,0,44	0/1:20,0:20:8.16:8,0,63	0/0:19,0:19:17.46:0,17,99	0/1:22,0:22:97.08:97,0,160	0/1:16,0:16:22.92:72,0,23	0/1:8,0:6:18.51:47,0,19
chr10	26717784	.	CTCTCTA	C	347.45	PASS	AB=0.990;AC=6;AF=0.107;AN=56;BaseQRankSum=2.523;DP=639;FS=8.665;HRun=0;HaplotypeScore=264.4994;InbreedingCoeff=0.1640;MQ=57.11;MQ0=25;MQRankSum=-1.743;QD=1.31;ReadPosRankSum=0.586;VQSLOD=1.0760;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:4.71:0,5,72	0/0:8,0:8:6.90:0,7,109	0/1:76,0:23:0.56:1,0,293	0/1:135,0:40:2.55:3,0,256	0/0:15,0:15:7.21:0,7,121	0/0:16,0:16:13.50:0,14,274	0/0:15,0:15:7.74:0,8,154	0/0:38,0:38:79.58:0,80,1436	0/0:14,0:14:6.07:0,6,106	0/0:23,0:23:47.86:0,48,666	0/1:17,0:16:2.47:2,0,22	0/0:19,0:19:14.51:0,15,241	0/1:18,0:18:21.40:21,0,42	0/0:11,0:11:10.80:0,11,206	1/1:3,10:13:21.05:427,21,0	0/0:23,0:23:39.10:0,39,481	0/0:18,0:18:2.23:0,2,289	0/0:11,0:11:24.21:0,24,321	0/0:12,0:9:5.90:0,6,281	0/0:11,0:11:5.67:0,6,60	0/0:8,0:7:4.88:0,5,135	0/0:15,0:15:7.17:0,7,128	0/0:17,0:17:10.16:0,10,164	0/0:20,0:20:13.13:0,13,221	0/0:20,0:20:18.16:0,18,236	0/0:21,0:21:46.65:0,47,612	0/0:14,0:14:14.12:0,14,194	0/0:11,0:9:15.17:0,15,151
chr10	26717829	.	TCACACACACACACA	T	3694.63	PASS	AB=0.859;AC=29;AF=0.537;AN=54;BaseQRankSum=2.381;DP=470;FS=7.905;HRun=0;HaplotypeScore=243.9632;InbreedingCoeff=0.1347;MQ=52.38;MQ0=9;MQRankSum=-4.348;QD=13.06;ReadPosRankSum=-0.212;VQSLOD=0.9902;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:9,1:10:4.37:58,4,0	1/1:3,7:10:8.76:249,9,0	./.	0/0:61,0:29:0.47:0,0,1	1/1:9,6:16:11.32:90,11,0	0/0:13,0:17:2.66:0,3,211	0/0:14,0:16:24.22:0,24,287	0/1:25,0:25:1.59:2,0,104	0/1:8,6:14:99:513,0,105	0/1:11,2:13:1.23:314,0,1	1/1:7,8:14:6.96:111,7,0	0/1:11,1:18:99:116,0,113	0/1:10,1:16:10.71:230,0,11	0/0:10,0:11:14.65:0,15,109	0/0:15,0:15:10.89:0,11,610	1/1:18,4:23:25.11:660,25,0	0/1:14,0:15:43.42:43,0,49	0/1:8,0:8:3.44:20,0,3	0/1:8,0:10:23.11:23,0,68	0/1:6,0:10:32.73:33,0,43	1/1:8,0:8:1.72:4,2,0	0/0:10,0:13:7.82:0,8,43	0/1:17,0:18:3.21:3,0,73	0/0:15,0:18:16.51:0,17,175	1/1:14,5:19:20.92:280,21,0	0/1:19,0:19:22.37:55,0,22	1/1:3,5:8:15.05:510,15,0	1/1:5,2:8:5.09:381,5,0
chr10	26718218	.	TTA	T	10890.05	PASS	AB=0.950;AC=52;AF=0.929;AN=56;BaseQRankSum=3.267;DP=328;FS=0.000;HRun=0;HaplotypeScore=38.9781;InbreedingCoeff=0.5755;MQ=68.55;MQ0=2;MQRankSum=-0.536;QD=34.14;ReadPosRankSum=1.466;VQSLOD=6.3791;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,11:12:33.11:473,33,0	1/1:0,5:5:12.04:172,12,0	0/1:3,0:3:0:0,0,0	0/1:8,1:6:1.08:1,0,28	1/1:0,15:15:45.04:618,45,0	1/1:0,14:14:30.10:430,30,0	1/1:0,2:2:6.02:86,6,0	1/1:7,42:49:99:1759,126,0	1/1:0,12:12:33.11:473,33,0	1/1:1,14:15:42.12:581,42,0	1/1:0,18:18:54.04:732,54,0	1/1:0,3:2:3.01:43,3,0	1/1:0,13:13:36.12:516,36,0	1/1:0,10:10:27.09:387,27,0	0/0:9,0:9:27.09:0,27,461	1/1:0,13:13:30.10:430,30,0	1/1:1,14:15:33.11:473,33,0	1/1:1,16:17:30.10:430,30,0	1/1:3,16:19:51.14:709,51,0	1/1:0,9:9:24.08:344,24,0	1/1:0,7:6:15.05:215,15,0	1/1:0,1:1:3.01:43,3,0	1/1:0,4:4:9.03:129,9,0	1/1:0,3:3:9.03:129,9,0	1/1:0,7:7:12.04:172,12,0	1/1:0,10:10:30.10:430,30,0	1/1:0,14:14:35.87:515,36,0	1/1:0,20:20:42.14:602,42,0
chr10	26722974	.	C	CAAAA	17749.18	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-4.559;DP=523;FS=2.455;HRun=9;HaplotypeScore=102.1844;InbreedingCoeff=0.9529;MQ=85.84;MQ0=0;MQRankSum=-8.071;QD=39.80;ReadPosRankSum=-1.511;VQSLOD=3.6638;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,11:20:42.06:872,42,0	1/1:2,6:8:18.06:433,18,0	0/0:23,0:21:54.11:0,54,731	0/0:26,0:27:32.36:0,32,612	1/1:10,9:22:40.38:830,40,0	1/1:5,10:17:36.12:784,36,0	1/1:4,7:15:36.04:724,36,0	1/1:20,8:31:48.12:968,48,0	1/1:4,8:12:24.08:576,24,0	1/1:11,9:23:51.15:983,51,0	1/1:8,6:15:30.09:582,30,0	1/1:8,8:16:24.08:540,24,0	1/1:9,9:19:39.10:825,39,0	1/1:2,4:7:8.99:164,9,0	0/0:27,0:27:75.19:0,75,1096	1/1:4,15:22:42.14:945,42,0	1/1:3,14:22:47.84:1035,48,0	1/1:3,3:7:12.04:287,12,0	1/1:8,8:18:31.90:600,32,0	1/1:7,16:26:60.17:1275,60,0	1/1:5,10:15:30.10:640,30,0	1/1:9,6:15:23.99:402,24,0	1/1:3,12:18:27.09:616,27,0	1/1:5,9:17:15.52:362,16,0	1/1:7,16:26:45.15:1052,45,0	1/1:7,15:24:54.17:1078,54,0	1/1:5,17:25:39.13:852,39,0	1/1:2,3:6:15.05:325,15,0
chr10	26723406	.	TC	T	24413.47	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=4.416;DP=723;FS=9.743;HRun=3;HaplotypeScore=78.2310;InbreedingCoeff=0.9967;MQ=85.72;MQ0=0;MQRankSum=-9.225;QD=38.69;ReadPosRankSum=4.713;VQSLOD=4.5320;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,44:44:99:1678,120,0	1/1:0,17:17:48.16:671,48,0	0/0:27,0:27:60.67:0,61,1116	0/0:26,0:26:50.23:0,50,1070	1/1:0,29:29:81.23:1111,81,0	1/1:0,10:10:27.07:377,27,0	1/1:0,22:22:63.21:881,63,0	1/1:0,32:32:96.30:1310,96,0	1/1:0,22:22:54.18:755,54,0	1/1:0,31:31:93.30:1284,93,0	1/1:0,18:18:54.06:690,54,0	1/1:0,33:33:81.27:1131,81,0	1/1:0,29:29:72.71:1007,73,0	1/1:0,39:39:99:1511,108,0	0/0:39,0:39:99:0,117,1819	1/1:0,30:30:84.28:1175,84,0	1/1:0,39:39:99:1636,117,0	1/1:0,11:11:33.11:462,33,0	1/1:0,23:23:69.18:910,69,0	1/1:0,15:15:45.15:629,45,0	1/1:0,29:29:81.27:1133,81,0	1/1:0,20:20:57.19:797,57,0	1/1:0,25:25:60.05:839,60,0	1/1:0,24:24:72.24:1007,72,0	1/1:0,20:20:54.18:755,54,0	1/1:0,32:32:96.30:1319,96,0	1/1:0,29:29:78.26:1091,78,0	1/1:0,8:8:18.06:252,18,0
chr10	26725108	.	AT	A	10729.45	PASS	AB=1.000;AC=53;AF=0.946;AN=56;BaseQRankSum=-3.441;DP=506;FS=3.509;HRun=9;HaplotypeScore=53.1990;InbreedingCoeff=0.6849;MQ=67.92;MQ0=0;MQRankSum=-0.938;QD=21.85;ReadPosRankSum=4.712;VQSLOD=5.4693;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,14:14:42.02:384,42,0	1/1:0,12:12:36.02:330,36,0	0/0:15,0:11:18.87:0,19,201	0/1:11,0:7:6.07:6,0,46	1/1:5,28:33:59.43:707,59,0	1/1:0,16:16:48.03:439,48,0	1/1:1,6:7:15.01:137,15,0	1/1:10,23:33:65.95:622,66,0	1/1:1,12:13:33.02:302,33,0	1/1:4,22:26:65.83:583,66,0	1/1:1,35:36:82.24:894,82,0	1/1:1,10:11:24.01:220,24,0	1/1:1,16:17:45.02:412,45,0	1/1:1,14:15:26.36:317,26,0	1/1:2,0:21:34.63:102,35,0	1/1:1,12:13:36.02:330,36,0	1/1:2,21:23:57.03:522,57,0	1/1:1,14:15:41.99:377,42,0	1/1:0,20:20:59.99:538,60,0	1/1:3,25:28:53.32:634,53,0	1/1:1,5:6:9:82,9,0	1/1:0,9:9:26.97:238,27,0	1/1:1,15:16:45.02:412,45,0	1/1:1,5:6:15.01:137,15,0	1/1:2,22:24:54.03:494,54,0	1/1:0,21:21:63.03:577,63,0	1/1:1,23:24:63.03:577,63,0	1/1:0,21:21:39.02:357,39,0
chr10	26726158	.	CATT	C	19366.98	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=2.814;DP=526;FS=11.351;HRun=0;HaplotypeScore=97.8400;InbreedingCoeff=0.9351;MQ=82.57;MQ0=0;MQRankSum=-7.080;QD=41.21;ReadPosRankSum=5.748;VQSLOD=5.5163;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,22:22:51.17:869,51,0	1/1:0,2:2:3.01:51,3,0	0/0:21,0:21:60.13:0,60,1110	0/0:13,0:14:32.15:0,32,652	1/1:0,22:22:57.13:921,57,0	1/1:1,23:24:57.19:952,57,0	1/1:2,24:26:63.22:1072,63,0	1/1:2,26:28:78.12:1141,78,0	1/1:0,21:21:48.10:784,48,0	1/1:0,14:14:42.14:689,42,0	1/1:0,16:16:36.12:610,36,0	1/1:1,16:17:42.14:715,42,0	1/1:0,22:22:60.20:1006,60,0	1/1:0,23:23:60.21:1021,60,0	0/0:21,0:20:60.19:0,60,1302	1/1:0,18:18:36.12:613,36,0	1/1:1,17:18:33.07:562,33,0	1/1:0,22:22:57.20:972,57,0	1/1:1,22:23:66.11:961,66,0	1/1:0,19:19:51.17:853,51,0	1/1:0,16:16:39.05:629,39,0	1/1:0,18:18:45.15:765,45,0	1/1:1,15:16:36.02:611,36,0	1/1:1,18:19:45.15:765,45,0	1/1:1,16:17:45.15:764,45,0	1/1:0,20:20:57.20:971,57,0	1/1:1,21:22:48.04:817,48,0	1/1:0,5:5:15.05:255,15,0
chr10	26726640	.	AAAAAG	A	6710.27	PASS	AB=0.964;AC=48;AF=0.857;AN=56;BaseQRankSum=0.153;DP=527;FS=4.144;HRun=0;HaplotypeScore=129.0143;InbreedingCoeff=0.6377;MQ=51.91;MQ0=9;MQRankSum=-2.104;QD=14.19;ReadPosRankSum=2.494;VQSLOD=4.4698;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:34,6:37:60.84:542,61,0	1/1:6,0:6:6.95:45,7,0	0/0:15,0:7:21:0,21,332	0/0:11,0:7:14.83:0,15,134	1/1:24,0:24:27.61:196,28,0	1/1:15,1:16:41.71:330,42,0	1/1:19,0:19:29.61:225,30,0	1/1:22,2:23:44.70:391,45,0	1/1:13,1:12:23.81:207,24,0	1/1:19,1:20:44.73:358,45,0	1/1:13,4:17:29.90:346,30,0	1/1:15,1:16:35.21:277,35,0	1/1:13,1:13:24.33:224,24,0	0/1:15,0:14:6.69:158,0,7	0/0:28,0:28:67.98:0,68,1103	1/1:16,0:16:26.56:221,27,0	1/1:31,1:31:45.91:348,46,0	0/1:12,1:13:8.64:146,0,9	1/1:16,1:17:33.44:329,33,0	1/1:20,0:20:11.06:105,11,0	1/1:8,1:8:11.98:148,12,0	1/1:14,1:15:39.91:301,40,0	1/1:23,3:25:44.35:407,44,0	1/1:11,0:11:7.20:44,7,0	1/1:19,0:19:28.12:243,28,0	1/1:27,1:28:75.70:592,76,0	1/1:28,0:27:58.39:454,58,0	1/1:14,0:14:1.70:72,2,0
chr10	26726641	.	AAAAG	A	12056.80	PASS	AB=0.778;AC=49;AF=0.875;AN=56;BaseQRankSum=-2.262;DP=535;FS=6.469;HRun=0;HaplotypeScore=102.0096;InbreedingCoeff=0.7842;MQ=52.26;MQ0=9;MQRankSum=-1.163;QD=25.17;ReadPosRankSum=3.702;VQSLOD=4.3000;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,26:36:69.16:953,69,0	1/1:2,4:6:8.69:114,9,0	0/0:15,0:7:21:0,21,306	0/0:11,0:7:16.52:0,17,135	1/1:20,5:25:21.20:404,21,0	1/1:4,12:16:42.98:618,43,0	1/1:10,9:19:29.54:444,30,0	1/1:16,10:25:51.14:683,51,0	1/1:8,6:12:21.75:331,22,0	1/1:5,15:20:28.05:623,28,0	1/1:14,4:18:37.59:429,38,0	1/1:11,5:16:34.70:542,35,0	1/1:9,5:13:34.98:380,35,0	1/1:12,5:16:20.45:371,20,0	0/0:30,0:30:14.92:0,15,838	1/1:1,15:16:29.65:461,30,0	1/1:9,23:31:44.92:699,45,0	0/1:10,4:14:11.96:241,0,12	1/1:5,12:17:47.86:557,48,0	1/1:17,3:20:20.83:221,21,0	1/1:2,7:8:12.04:163,12,0	1/1:5,10:15:41.83:490,42,0	1/1:18,9:26:59.98:709,60,0	1/1:2,9:11:8.94:114,9,0	1/1:10,8:18:34.63:437,35,0	1/1:4,24:28:80.59:992,81,0	1/1:20,8:28:17.84:841,18,0	1/1:6,8:14:17.97:239,18,0
chr10	26726642	.	AAAG	A	8613.47	PASS	AB=0.850;AC=50;AF=0.893;AN=56;BaseQRankSum=0.563;DP=534;FS=8.961;HRun=0;HaplotypeScore=105.3003;InbreedingCoeff=0.5825;MQ=52.39;MQ0=9;MQRankSum=-1.109;QD=16.96;ReadPosRankSum=3.889;VQSLOD=3.7416;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:37,2:36:67.66:646,68,0	1/1:5,1:6:8.85:102,9,0	0/0:15,0:7:20.96:0,21,247	0/0:11,0:7:13.96:0,14,116	1/1:20,4:24:16.71:384,17,0	1/1:16,0:16:41.81:398,42,0	1/1:18,1:19:13.03:300,13,0	1/1:26,0:25:52.75:481,53,0	1/1:14,0:12:11.97:207,12,0	1/1:19,0:19:24.63:403,25,0	1/1:17,1:18:34.57:306,35,0	1/1:14,2:16:34:381,34,0	1/1:14,0:13:30.64:253,31,0	1/1:16,2:17:17.92:302,18,0	0/1:31,0:31:24.84:25,0,649	1/1:16,0:16:29.09:272,29,0	1/1:30,1:30:35.41:459,35,0	0/1:8,6:14:0.53:185,0,1	1/1:16,1:17:43.44:440,43,0	1/1:19,1:20:20.40:185,20,0	1/1:9,0:8:12.01:111,12,0	1/1:14,1:15:41.87:376,42,0	1/1:26,1:26:58.87:525,59,0	1/1:10,1:11:9.02:102,9,0	1/1:18,0:18:32.88:297,33,0	1/1:27,1:28:81.03:745,81,0	1/1:26,2:27:4.11:544,4,0	1/1:13,1:14:20.24:184,20,0
chr10	26726644	.	AG	A	6244.97	PASS	AB=1.000;AC=52;AF=0.929;AN=56;BaseQRankSum=1.519;DP=501;FS=7.694;HRun=1;HaplotypeScore=92.7901;InbreedingCoeff=0.4589;MQ=56.30;MQ0=9;MQRankSum=-1.743;QD=12.90;ReadPosRankSum=3.917;VQSLOD=3.6006;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:37,0:34:63.77:389,64,0	1/1:5,0:5:8.85:56,9,0	0/0:17,0:9:26.87:0,27,220	0/1:11,0:7:8.78:9,0,90	1/1:22,0:22:36.51:335,37,0	1/1:17,0:17:50.19:329,50,0	1/1:14,0:14:13.04:186,13,0	1/1:24,1:24:63.32:421,63,0	1/1:14,0:12:14.72:161,15,0	1/1:18,0:18:27.75:269,28,0	1/1:15,1:16:35.80:231,36,0	1/1:15,1:16:33.20:282,33,0	1/1:14,0:13:26.96:173,27,0	1/1:16,0:15:36.54:263,37,0	0/1:30,0:30:12.22:12,0,334	1/1:15,0:15:25.55:160,26,0	1/1:27,4:30:34.77:275,35,0	1/1:13,1:14:10.94:115,11,0	1/1:16,0:16:45.83:297,46,0	1/1:13,1:14:27.41:185,27,0	1/1:9,0:8:11.74:71,12,0	1/1:12,2:14:41.32:263,41,0	1/1:22,0:21:51.07:375,51,0	1/1:10,1:11:8.87:56,9,0	1/1:15,0:15:31.99:236,32,0	1/1:26,1:27:80.06:565,80,0	1/1:25,4:28:38.74:418,39,0	1/1:11,1:12:16.81:115,17,0
chr10	26729720	.	C	CT	21711.43	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-9.650;DP=715;FS=15.244;HRun=5;HaplotypeScore=63.0321;InbreedingCoeff=0.9988;MQ=90.79;MQ0=0;MQRankSum=-11.280;QD=32.90;ReadPosRankSum=7.010;VQSLOD=3.1001;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,49:49:99:1539,117,0	1/1:1,11:12:24.08:316,24,0	0/0:29,0:29:75.05:0,75,761	0/0:26,0:26:63.09:0,63,636	1/1:4,17:21:51.17:667,51,0	1/1:1,20:21:54.18:710,54,0	1/1:1,26:27:69.22:908,69,0	1/1:7,35:41:99:1274,102,0	1/1:1,23:24:66.21:868,66,0	1/1:2,19:21:57.17:734,57,0	1/1:5,19:24:60.19:770,60,0	1/1:7,31:38:84.06:1105,84,0	1/1:5,24:29:57.17:733,57,0	1/1:2,23:25:66:868,66,0	1/1:2,26:28:75.24:987,75,0	1/1:2,27:29:78.25:1025,78,0	1/1:3,37:40:99:1381,105,0	1/1:3,19:22:51.17:671,51,0	1/1:2,14:16:42.09:533,42,0	1/1:1,23:24:60.16:770,60,0	1/1:3,24:27:66.21:868,66,0	1/1:1,18:19:48.16:631,48,0	1/1:1,15:16:45.15:588,45,0	1/1:1,31:32:78.25:1026,78,0	1/1:1,12:13:33.11:430,33,0	1/1:0,25:25:75.23:971,75,0	1/1:0,23:23:63.20:829,63,0	1/1:1,12:13:39.13:512,39,0
chr10	26729725	.	T	TC	6842.25	PASS	AB=1.000;AC=49;AF=0.875;AN=56;BaseQRankSum=9.033;DP=707;FS=21.140;HRun=5;HaplotypeScore=112.8332;InbreedingCoeff=0.4541;MQ=90.03;MQ0=0;MQRankSum=-8.372;QD=10.48;ReadPosRankSum=12.092;VQSLOD=0.0171;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:54,0:54:3.09:444,3,0	0/1:12,0:12:0.77:78,0,1	0/0:29,0:29:69.13:0,69,720	0/0:25,0:25:68.32:0,68,736	1/1:18,1:19:47.97:270,48,0	1/1:20,0:20:50.78:259,51,0	1/1:26,0:26:64.19:312,64,0	1/1:37,0:36:4.54:243,5,0	1/1:24,0:24:62.07:315,62,0	1/1:20,0:20:48.11:218,48,0	1/1:20,1:21:32.69:297,33,0	1/1:33,0:33:58.82:372,59,0	0/1:27,0:27:12.34:222,0,12	1/1:24,0:24:39.02:296,39,0	1/1:30,0:30:8.40:270,8,0	1/1:29,0:29:28.17:324,28,0	1/1:39,0:39:40.26:430,40,0	1/1:20,0:20:29.38:220,29,0	1/1:15,0:15:34.80:150,35,0	1/1:26,0:26:23.71:244,24,0	1/1:25,0:25:39.04:280,39,0	1/1:21,0:21:24.70:210,25,0	1/1:17,1:18:4.71:189,5,0	1/1:30,0:30:73.47:371,73,0	1/1:14,1:15:10.05:157,10,0	1/1:27,0:27:17.44:249,17,0	0/1:28,0:28:31.52:217,0,32	1/1:13,0:13:37.25:206,37,0
chr10	26730421	.	A	AC	12493.69	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=2.442;DP=604;FS=16.055;HRun=4;HaplotypeScore=150.0735;InbreedingCoeff=0.9843;MQ=68.92;MQ0=10;MQRankSum=-4.598;QD=23.71;ReadPosRankSum=6.916;VQSLOD=2.9749;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,9:10:20.55:239,21,0	1/1:4,6:9:15.52:188,16,0	0/0:30,0:23:53.20:0,53,618	0/0:30,0:28:68.92:0,69,770	1/1:4,33:37:48.43:860,48,0	1/1:5,18:21:42.13:536,42,0	1/1:4,16:20:36.11:454,36,0	1/1:14,20:33:57.92:782,58,0	1/1:2,14:16:32.11:423,32,0	1/1:7,11:16:42.06:490,42,0	1/1:13,11:24:15.68:325,16,0	1/1:5,12:17:21.07:265,21,0	1/1:3,29:32:55.01:864,55,0	1/1:4,17:21:41.96:494,42,0	0/0:17,0:17:42.99:0,43,187	1/1:6,16:22:49.38:603,49,0	1/1:2,14:16:36.11:455,36,0	1/1:1,11:12:33.11:419,33,0	1/1:5,12:17:31.64:448,32,0	1/1:4,23:28:51.34:613,51,0	1/1:5,19:23:37:464,37,0	1/1:8,20:26:45.47:676,45,0	1/1:4,18:22:23.93:410,24,0	1/1:1,13:13:24.08:307,24,0	1/1:2,13:15:24.16:307,24,0	1/1:2,18:20:47.94:584,48,0	1/1:7,25:32:48.84:827,49,0	1/1:0,12:12:36.12:460,36,0
chr10	26730425	.	CA	C	4756.97	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=8.755;DP=592;FS=22.553;HRun=1;HaplotypeScore=178.8693;InbreedingCoeff=0.9293;MQ=66.73;MQ0=10;MQRankSum=-5.526;QD=9.25;ReadPosRankSum=5.963;VQSLOD=0.7258;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,0:10:22.19:105,22,0	1/1:9,1:9:15.20:68,15,0	0/0:30,0:23:69.17:0,69,945	0/0:29,0:27:71.81:0,72,971	1/1:39,0:39:46.08:281,46,0	1/1:21,2:20:41.73:202,42,0	1/1:16,0:16:29.57:119,30,0	1/1:29,3:31:56.20:344,56,0	1/1:15,0:15:27.22:118,27,0	1/1:17,2:18:28.93:228,29,0	1/1:20,2:22:18.95:147,19,0	1/1:13,0:13:22.29:117,22,0	1/1:32,0:32:49.03:288,49,0	1/1:21,0:20:43.80:229,44,0	0/0:19,0:19:3.80:0,4,136	1/1:19,2:21:40.45:194,40,0	1/1:18,0:18:40.05:217,40,0	1/1:15,0:15:39.54:228,40,0	1/1:17,0:17:34.99:226,35,0	1/1:24,1:25:40.89:219,41,0	1/1:22,0:21:35.02:163,35,0	1/1:23,3:24:40.22:222,40,0	1/1:20,0:20:20.87:127,21,0	1/1:15,0:14:25.71:133,26,0	1/1:16,0:16:27.48:154,27,0	1/1:20,0:20:35.85:209,36,0	1/1:32,1:32:39.62:247,40,0	1/1:13,0:13:35.53:169,36,0
chr10	26731181	.	CT	C	279.94	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-4.375;DP=413;FS=11.900;HRun=5;HaplotypeScore=66.7791;InbreedingCoeff=0.7456;MQ=65.94;MQ0=1;MQRankSum=0.139;QD=21.53;ReadPosRankSum=0.598;VQSLOD=2.0397;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:42.14:0,42,573	0/0:6,0:6:18.06:0,18,246	0/0:6,0:5:12.04:0,12,148	0/0:5,0:4:6.02:0,6,82	0/0:28,0:28:78.26:0,78,1066	0/0:18,0:18:51.14:0,51,665	0/0:4,0:4:12.04:0,12,164	0/0:38,0:38:99:0,99,1338	0/0:8,0:8:21.06:0,21,273	0/0:23,0:23:60.20:0,60,820	0/0:21,0:21:60.19:0,60,805	0/0:11,0:11:30.10:0,30,410	0/0:16,0:16:39.12:0,39,515	0/0:18,0:18:45.15:0,45,615	1/1:1,12:13:33.09:374,33,0	0/0:14,0:14:42.14:0,42,574	0/0:21,0:21:63.21:0,63,861	0/0:9,0:9:24.06:0,24,311	0/0:21,0:21:60.15:0,60,770	0/0:19,0:19:57.17:0,57,749	0/0:4,0:4:12.04:0,12,164	0/0:2,0:2:6.02:0,6,82	0/0:8,0:8:24.07:0,24,312	0/0:6,0:6:15.05:0,15,205	0/0:16,0:16:48.15:0,48,643	0/0:18,0:18:54.18:0,54,739	0/0:28,0:28:84.27:0,84,1134	0/0:18,0:18:51.14:0,51,679
chr10	26732198	.	AAAC	A	2412.61	PASS	AB=0.985;AC=24;AF=0.429;AN=56;BaseQRankSum=-12.099;DP=546;FS=8.630;HRun=0;HaplotypeScore=94.6835;InbreedingCoeff=-0.5867;MQ=61.28;MQ0=7;MQRankSum=0.983;QD=5.68;ReadPosRankSum=1.817;VQSLOD=1.7543;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:24:99:242,0,182	0/1:11,0:11:47.78:48,0,193	0/0:34,0:25:56.21:0,56,721	0/0:35,0:28:63.18:0,63,1024	0/1:14,0:14:93.70:94,0,148	0/1:9,0:9:21.84:22,0,226	0/1:19,0:19:31.86:32,0,361	0/1:24,0:24:99:125,0,209	0/1:15,0:15:99:110,0,215	1/1:13,7:20:17.02:334,17,0	0/1:17,0:17:77.61:160,0,78	0/1:32,0:32:77.55:78,0,548	0/1:22,0:22:29.73:30,0,420	0/1:23,0:23:2.30:2,0,453	0/0:24,0:24:63.10:0,63,809	0/1:16,0:16:56.72:57,0,309	0/1:26,0:26:55.65:56,0,484	0/1:16,0:16:24.29:24,0,282	0/1:9,0:9:14.16:139,0,14	0/1:7,7:14:17.95:18,0,29	0/1:42,0:41:99:315,0,530	0/1:4,0:4:26.16:41,0,26	0/1:11,0:10:11.16:149,0,11	0/1:27,0:27:61.16:61,0,485	0/1:12,0:12:98.09:144,0,98	0/1:18,0:18:27.15:294,0,27	0/0:20,0:20:14.16:0,14,421	0/0:7,0:7:6.02:0,6,70
chr10	26732212	.	A	ACAGCAG	1204.93	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=-6.575;DP=531;FS=5.203;HRun=0;HaplotypeScore=138.2451;InbreedingCoeff=0.2230;MQ=63.23;MQ0=9;MQRankSum=-4.584;QD=14.88;ReadPosRankSum=-4.394;VQSLOD=1.5768;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:15.92:0,16,197	0/0:10,0:10:18.95:0,19,291	0/0:37,0:26:27:0,27,379	0/0:38,0:28:38.22:0,38,678	0/0:11,0:11:15.05:0,15,236	0/0:13,0:13:21.07:0,21,268	0/0:19,0:19:37.72:0,38,498	0/0:19,0:19:22.95:0,23,295	0/0:18,0:18:19.68:0,20,333	0/1:19,0:19:9.95:10,0,33	0/0:15,0:15:8.98:0,9,145	0/0:30,0:30:7.03:0,7,765	0/0:19,0:19:14.98:0,15,528	0/0:20,0:20:25:0,25,599	1/1:8,19:28:39.13:1283,39,0	0/0:16,0:16:29.92:0,30,474	0/0:19,0:19:45.15:0,45,717	0/0:15,0:15:13.93:0,14,389	0/1:16,0:15:6.79:7,0,68	0/0:12,0:11:1.41:0,1,44	0/0:40,0:39:52.08:0,52,803	0/0:5,0:5:4.25:0,4,30	0/0:11,0:10:5.45:0,5,53	0/0:25,0:25:44.93:0,45,696	0/0:12,0:12:11.69:0,12,167	0/1:18,0:18:20.37:20,0,85	0/0:19,0:19:15.09:0,15,540	0/0:4,0:4:5.10:0,5,92
chr10	26732399	.	TAAG	T	18457.14	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=6.445;DP=509;FS=7.346;HRun=0;HaplotypeScore=130.4297;InbreedingCoeff=0.9370;MQ=67.45;MQ0=0;MQRankSum=-1.866;QD=38.94;ReadPosRankSum=-0.581;VQSLOD=5.6906;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,16:17:45.15:713,45,0	1/1:1,10:11:24.07:381,24,0	0/0:9,0:9:6:0,6,227	0/0:5,0:5:11.74:0,12,223	1/1:2,24:26:69.17:1025,69,0	1/1:1,16:17:42.14:666,42,0	1/1:3,8:11:21.07:333,21,0	1/1:9,28:37:84.27:1309,84,0	1/1:2,16:18:42.14:666,42,0	1/1:3,35:38:99:1613,105,0	1/1:1,23:24:66.14:991,66,0	1/1:0,19:19:54.18:856,54,0	1/1:1,18:19:54.18:856,54,0	1/1:2,11:13:30.10:475,30,0	0/0:21,0:21:63.22:0,63,1376	1/1:1,13:14:30.10:476,30,0	1/1:0,19:19:39.13:619,39,0	1/1:3,14:17:42.14:665,42,0	1/1:1,13:14:39.09:584,39,0	1/1:1,25:26:75.25:1151,75,0	1/1:1,9:10:24:325,24,0	1/1:1,6:7:15.05:237,15,0	1/1:4,21:25:53.85:856,54,0	1/1:2,8:10:18.06:285,18,0	1/1:1,17:18:45.15:713,45,0	1/1:3,24:27:72.25:1140,72,0	1/1:2,24:26:63.21:999,63,0	1/1:0,11:11:33.11:523,33,0
chr10	26732887	.	G	GT	14959.12	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-6.830;DP=496;FS=0.000;HRun=5;HaplotypeScore=43.5253;InbreedingCoeff=0.9566;MQ=71.73;MQ0=0;MQRankSum=-4.481;QD=32.45;ReadPosRankSum=1.138;VQSLOD=4.9928;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,20:25:57.19:750,57,0	1/1:1,4:5:12:138,12,0	0/0:8,0:8:17.91:0,18,176	0/0:9,0:9:13.26:0,13,184	1/1:2,22:24:66.16:824,66,0	1/1:1,16:17:48.16:632,48,0	1/1:0,6:6:15.05:197,15,0	1/1:7,26:33:75.22:953,75,0	1/1:1,7:8:21.07:276,21,0	1/1:2,18:21:57.05:725,57,0	1/1:1,28:29:81.22:1032,81,0	1/1:1,16:17:48.16:632,48,0	1/1:1,18:19:51.17:671,51,0	1/1:1,12:13:24.08:316,24,0	0/0:18,0:18:51.13:0,51,548	1/1:0,31:31:75.24:987,75,0	1/1:1,17:18:12.91:520,13,0	1/1:3,10:14:36.12:467,36,0	1/1:3,24:27:72.15:905,72,0	1/1:2,23:25:66.21:859,66,0	1/1:2,10:12:21.07:276,21,0	1/1:1,10:11:30.10:388,30,0	1/1:1,23:24:60.20:789,60,0	1/1:0,7:7:18.06:237,18,0	1/1:4,15:19:39.07:493,39,0	1/1:3,15:18:45.15:590,45,0	1/1:3,24:28:69.22:907,69,0	1/1:0,10:10:30.10:395,30,0
chr10	26733633	.	C	CT	17043.91	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-6.716;DP=615;FS=3.246;HRun=7;HaplotypeScore=53.0909;InbreedingCoeff=0.9866;MQ=74.04;MQ0=0;MQRankSum=-6.367;QD=29.04;ReadPosRankSum=3.806;VQSLOD=5.4260;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,18:21:54.17:652,54,0	1/1:1,5:6:15.05:181,15,0	0/0:12,1:13:29.25:0,29,262	0/0:15,0:15:24.02:0,24,228	1/1:2,30:32:81.25:974,81,0	1/1:5,24:29:57.17:689,57,0	1/1:1,9:10:27.08:326,27,0	1/1:12,37:49:99:1258,108,0	1/1:3,23:26:54.17:652,54,0	1/1:7,22:29:66.19:787,66,0	1/1:1,21:22:63.19:761,63,0	1/1:4,23:27:60.18:725,60,0	1/1:2,23:26:60.66:724,61,0	1/1:3,14:17:39.12:471,39,0	1/1:1,17:18:42.13:507,42,0	1/1:3,19:22:54.64:653,55,0	1/1:1,22:23:54.17:652,54,0	1/1:4,12:16:33.10:398,33,0	1/1:3,21:24:63.19:760,63,0	1/1:0,26:26:78.16:910,78,0	1/1:0,8:8:21.06:254,21,0	1/1:2,22:24:60.18:721,60,0	1/1:3,21:24:60.18:725,60,0	1/1:1,13:14:33.10:399,33,0	1/1:2,23:25:66.20:797,66,0	1/1:3,29:32:90.05:1051,90,0	1/1:4,22:26:60.18:724,60,0	1/1:2,9:11:24.07:290,24,0
chr10	26735126	.	G	GAGAGAGAGAA	9211.49	PASS	AB=0.702;AC=49;AF=0.875;AN=56;BaseQRankSum=-2.469;DP=665;FS=0.000;HRun=0;HaplotypeScore=164.5242;InbreedingCoeff=0.4477;MQ=53.21;MQ0=30;MQRankSum=0.783;QD=15.94;ReadPosRankSum=2.421;VQSLOD=3.8006;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:19:29.57:233,30,0	1/1:1,16:17:11.94:347,12,0	0/0:65,0:18:17.56:0,18,96	0/1:87,0:18:3.89:4,0,125	1/1:25,0:25:32.79:261,33,0	1/1:16,0:15:25.78:578,26,0	1/1:16,0:15:32.93:481,33,0	1/1:29,0:28:42.65:676,43,0	1/1:5,19:25:12.04:378,12,0	1/1:17,0:17:12.58:430,13,0	1/1:2,12:17:20.71:256,21,0	1/1:24,0:23:36.02:577,36,0	1/1:8,12:21:7.30:400,7,0	1/1:2,18:22:5.98:87,6,0	0/0:20,0:20:14.69:0,15,279	1/1:3,18:23:6:292,6,0	1/1:15,0:15:8.72:97,9,0	0/1:4,10:16:31.75:148,0,32	1/1:21,0:20:30.10:493,30,0	1/1:4,12:26:36.02:709,36,0	1/1:8,0:8:11.96:98,12,0	0/1:2,8:16:0.67:299,0,1	1/1:5,15:23:8.85:249,9,0	1/1:20,0:20:18.07:546,18,0	1/1:3,6:14:6.02:198,6,0	1/1:24,0:24:65.73:729,66,0	1/1:8,14:22:1.68:392,2,0	1/1:13,0:12:28.38:255,28,0
chr10	26735128	.	G	GAGAGAGAA	6425.65	PASS	AB=0.947;AC=34;AF=0.607;AN=56;BaseQRankSum=-3.634;DP=664;FS=0.000;HRun=0;HaplotypeScore=158.5738;InbreedingCoeff=-0.3031;MQ=53.62;MQ0=31;MQRankSum=-1.164;QD=11.12;ReadPosRankSum=7.007;VQSLOD=2.5395;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:20,0:19:7.10:144,0,7	0/1:15,0:15:4.51:226,0,5	0/0:65,0:16:21.11:0,21,139	0/1:92,0:20:4.76:5,0,119	0/1:6,19:27:11.48:218,0,11	1/1:15,1:15:8.92:384,9,0	0/1:16,0:15:0.90:346,0,1	0/1:30,0:29:18.13:466,0,18	1/1:24,1:25:12:291,12,0	0/1:18,0:18:11.75:312,0,12	0/1:16,0:16:37.03:132,0,37	0/1:25,0:24:11.98:379,0,12	1/1:21,0:21:10.39:274,10,0	0/1:21,1:22:32.19:86,0,32	0/0:20,0:20:14.67:0,15,279	0/1:23,0:23:15.90:195,0,16	0/1:7,7:15:25.86:75,0,26	0/1:14,0:14:24.98:103,0,25	1/1:21,0:20:13.41:290,13,0	0/1:22,3:25:39.72:559,0,40	0/1:7,0:7:5.51:67,0,6	0/1:16,0:16:22.23:175,0,22	1/1:22,0:22:8.63:159,9,0	1/1:20,0:20:2.85:442,3,0	1/1:12,1:13:6.02:186,6,0	1/1:23,0:23:60.55:525,61,0	0/1:20,0:20:10.73:252,0,11	0/1:14,0:12:22.87:136,0,23
chr10	26735139	.	AGAGT	A	4129.55	PASS	AB=0.988;AC=37;AF=0.661;AN=56;BaseQRankSum=-6.595;DP=669;FS=1.139;HRun=0;HaplotypeScore=140.4532;InbreedingCoeff=-0.3498;MQ=53.66;MQ0=34;MQRankSum=3.246;QD=6.27;ReadPosRankSum=-5.719;VQSLOD=0.6832;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:18,1:18:14.73:102,15,0	0/1:11,0:11:19.96:20,0,27	0/1:72,0:12:25.24:25,0,48	0/1:92,0:25:20.81:21,0,95	1/1:25,0:25:1.83:147,2,0	1/1:17,1:17:12.31:296,12,0	1/1:18,0:16:18.64:242,19,0	0/1:30,2:31:52.38:534,0,52	0/1:26,1:27:5.19:159,0,5	0/1:23,0:23:66.90:308,0,67	1/1:14,0:14:1.70:74,2,0	0/1:25,0:24:83.59:240,0,84	0/1:15,1:16:38.60:39,0,45	0/1:22,0:22:0.60:41,0,1	0/1:27,0:27:0.34:1,0,0	0/1:21,0:21:4.59:88,0,5	1/1:9,1:10:13.16:117,13,0	0/0:10,0:10:3.01:0,3,30	0/1:19,0:18:1.32:257,0,1	0/1:26,0:26:29.76:211,0,30	1/1:0,6:6:3.01:37,3,0	1/1:18,0:18:0.51:129,1,0	0/1:23,0:23:5.71:91,0,6	1/1:18,1:19:10.84:190,11,0	1/1:15,0:15:20.99:195,21,0	0/1:26,0:26:99:216,0,424	0/1:18,1:19:52.80:153,0,53	0/1:15,0:13:10.51:198,0,11
chr10	26735141	.	AGT	A	4919.74	PASS	AB=1.000;AC=50;AF=0.893;AN=56;BaseQRankSum=-4.880;DP=666;FS=0.616;HRun=0;HaplotypeScore=130.7872;InbreedingCoeff=0.0332;MQ=53.67;MQ0=34;MQRankSum=3.371;QD=7.50;ReadPosRankSum=-4.265;VQSLOD=3.7244;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:18:9.74:61,10,0	1/1:11,0:11:6.65:70,7,0	0/1:73,0:12:25.38:25,0,48	0/1:90,0:25:28.73:29,0,111	1/1:26,1:27:21.12:207,21,0	1/1:18,0:17:33.39:308,33,0	1/1:19,0:17:23.81:254,24,0	1/1:32,0:31:46.92:549,47,0	1/1:26,0:26:18.90:210,19,0	1/1:21,2:23:22.22:496,22,0	1/1:14,0:14:11.86:76,12,0	1/1:21,3:23:42.45:386,42,0	0/1:16,0:16:4.47:99,0,4	1/1:22,0:22:10.90:83,11,0	1/1:0,26:26:12.04:182,12,0	1/1:23,0:23:18.47:166,18,0	1/1:10,0:10:14.02:83,14,0	0/0:10,0:10:1.82:0,2,5	1/1:19,0:18:39.75:325,40,0	1/1:26,0:26:7.60:156,8,0	1/1:6,0:6:2.94:18,3,0	1/1:18,0:18:13.03:190,13,0	1/1:21,0:21:6.21:74,6,0	1/1:19,0:19:24.07:183,24,0	1/1:15,0:15:18.58:138,19,0	0/1:26,0:26:99:213,0,110	1/1:18,0:18:1.04:143,1,0	1/1:15,0:13:18.02:195,18,0
chr10	26735648	.	C	CCA	1470.66	PASS	AB=1.000;AC=45;AF=0.900;AN=50;BaseQRankSum=1.888;DP=560;FS=1.669;HRun=0;HaplotypeScore=120.4219;InbreedingCoeff=0.0778;MQ=67.04;MQ0=16;MQRankSum=0.070;QD=3.08;ReadPosRankSum=-0.298;VQSLOD=2.7128;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:31,0:31:14.99:141,15,0	0/1:7,0:7:0.25:24,0,0	./.	./.	1/1:21,0:20:9.01:97,9,0	1/1:20,0:20:6.33:74,6,0	1/1:17,0:16:4.60:47,5,0	1/1:18,0:18:1.36:3,1,0	1/1:18,0:19:12:106,12,0	1/1:14,0:14:10.03:68,10,0	0/1:15,0:15:4.97:21,0,5	1/1:17,0:17:6.87:50,7,0	1/1:16,0:16:6.70:62,7,0	1/1:26,0:26:12.96:95,13,0	1/1:22,0:21:3:34,3,0	1/1:14,0:14:9.87:77,10,0	0/1:20,0:19:15.25:83,0,15	1/1:18,0:17:11.12:89,11,0	0/1:14,0:14:0:0,0,0	1/1:21,0:20:10.79:79,11,0	1/1:17,7:22:3.13:45,3,0	1/1:17,0:17:2.99:24,3,0	1/1:13,0:13:2.71:23,3,0	0/1:25,0:23:0:0,0,0	1/1:32,0:31:9.44:86,9,0	1/1:18,0:18:11.95:95,12,0	1/1:16,0:16:16.13:137,16,0	./.
chr10	26735656	.	A	ACA	1299.48	PASS	AB=1.000;AC=46;AF=0.885;AN=52;BaseQRankSum=1.521;DP=577;FS=1.600;HRun=0;HaplotypeScore=111.1397;InbreedingCoeff=0.0751;MQ=55.84;MQ0=17;MQRankSum=1.272;QD=2.53;ReadPosRankSum=-0.491;VQSLOD=2.3300;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:37,0:37:14.97:131,15,0	0/1:10,0:10:0.25:24,0,0	./.	./.	1/1:22,0:21:9.01:97,9,0	1/1:22,0:20:6.33:74,6,0	1/1:16,0:15:1.60:22,2,0	1/1:19,0:19:5.15:18,5,0	1/1:21,0:21:12:106,12,0	1/1:16,0:16:6.18:53,6,0	0/1:17,0:17:4.97:21,0,5	1/1:25,0:24:6.87:50,7,0	1/1:16,0:16:6.70:62,7,0	1/1:19,4:24:12.96:95,13,0	1/1:21,0:20:2.61:33,3,0	1/1:13,0:13:9.87:77,10,0	0/1:22,0:21:18.26:52,0,18	1/1:21,0:20:7.56:51,8,0	0/1:13,0:13:0:0,0,0	1/1:20,0:19:10.40:79,10,0	1/1:28,0:25:3.13:45,3,0	1/1:17,0:17:5.03:30,5,0	1/1:14,0:14:2.71:23,3,0	0/1:26,0:25:0:0,0,0	1/1:35,0:33:9.44:86,9,0	1/1:18,0:18:9.51:78,10,0	1/1:14,0:14:10.17:85,10,0	0/1:6,0:5:0:0,0,0
chr10	26735688	.	A	ACACACG	5128.85	PASS	AB=0.791;AC=36;AF=0.643;AN=56;BaseQRankSum=2.426;DP=575;FS=17.811;HRun=0;HaplotypeScore=158.3127;InbreedingCoeff=0.1653;MQ=53.33;MQ0=15;MQRankSum=1.069;QD=10.55;ReadPosRankSum=3.492;VQSLOD=2.9851;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:45,0:44:38.41:519,38,0	0/1:4,0:12:41.98:79,0,42	0/0:20,0:9:23.90:0,24,229	0/0:21,0:18:25.18:0,25,288	1/1:5,0:14:8.02:53,8,0	1/1:23,1:22:21.43:364,21,0	1/1:18,0:17:22.45:226,22,0	1/1:22,0:22:31.52:271,32,0	1/1:7,12:22:11.99:264,12,0	0/1:13,0:13:13.32:241,0,13	0/1:17,0:17:1.42:136,0,1	0/1:9,0:26:22.06:163,0,22	1/1:21,0:21:37.55:323,38,0	1/1:28,0:28:27.29:293,27,0	0/0:20,0:19:8.61:0,9,115	0/1:3,6:16:12.81:198,0,13	0/1:22,0:24:81.03:297,0,81	1/1:23,1:23:36.87:365,37,0	0/1:13,0:11:11.35:152,0,11	1/1:21,0:21:4.36:261,4,0	1/1:30,0:29:22.69:302,23,0	0/1:3,7:14:13.92:52,0,14	1/1:4,9:17:3.15:48,3,0	0/0:8,12:21:2.99:0,3,24	0/1:15,0:28:7.67:165,0,8	0/1:16,0:16:0.53:170,0,1	1/1:16,0:16:11.32:185,11,0	0/0:5,0:4:2.98:0,3,22
chr10	26735689	.	CAT	C	4061.75	PASS	AB=1.000;AC=38;AF=0.679;AN=56;BaseQRankSum=-4.284;DP=569;FS=4.788;HRun=0;HaplotypeScore=125.4106;InbreedingCoeff=-0.0127;MQ=53.98;MQ0=15;MQRankSum=-0.408;QD=8.04;ReadPosRankSum=-0.071;VQSLOD=3.2206;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:45,0:44:30.76:385,31,0	0/1:12,0:12:13.49:58,0,13	0/0:20,0:9:26.98:0,27,257	0/0:23,0:20:11.17:0,11,422	1/1:16,0:14:1.44:22,1,0	1/1:24,0:22:36.70:322,37,0	1/1:19,0:18:28.87:229,29,0	1/1:3,19:22:55.50:405,55,0	0/1:21,0:21:12.37:12,0,17	0/1:13,0:13:4.44:169,0,4	0/1:17,0:17:17.90:102,0,18	0/1:26,0:25:16.35:51,0,16	1/1:21,0:21:27.17:286,27,0	0/1:29,0:29:11.64:244,0,12	1/1:19,0:18:4.47:109,4,0	0/1:14,0:14:10.96:11,0,36	0/1:24,0:24:10.64:266,0,11	1/1:23,1:23:39.25:273,39,0	1/1:13,0:11:14.45:176,14,0	1/1:21,0:21:7.59:201,8,0	1/1:31,0:29:25.32:250,25,0	0/1:14,0:14:24.92:33,0,25	0/1:17,0:17:5.38:18,0,5	0/0:21,0:19:2.88:0,3,15	1/1:26,0:25:8.07:74,8,0	0/1:16,0:16:18.45:156,0,18	1/1:15,1:16:8.99:197,9,0	0/1:5,0:4:3.47:12,0,3
chr10	26735925	.	C	CT	13352.20	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-7.530;DP=573;FS=4.566;HRun=8;HaplotypeScore=61.0879;InbreedingCoeff=0.8612;MQ=73.21;MQ0=0;MQRankSum=-2.791;QD=26.08;ReadPosRankSum=3.594;VQSLOD=5.7191;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,25:29:64.13:750,64,0	1/1:1,10:11:24.07:275,24,0	0/0:26,0:19:3.16:0,3,159	0/0:16,0:9:12.78:0,13,99	1/1:3,23:26:60.18:691,60,0	1/1:2,23:25:57.17:658,57,0	1/1:1,8:9:24.07:277,24,0	1/1:16,22:38:34.76:633,35,0	1/1:3,10:13:27.08:312,27,0	1/1:5,14:19:45.11:502,45,0	1/1:3,18:21:48.14:547,48,0	1/1:4,18:22:22.86:449,23,0	1/1:0,17:17:45.13:519,45,0	1/1:1,11:12:27.08:311,27,0	0/0:19,0:19:42.01:0,42,384	1/1:2,19:21:51.15:589,51,0	1/1:1,25:25:60.18:692,60,0	1/1:4,23:27:60.18:692,60,0	1/1:3,16:19:48.14:551,48,0	1/1:1,26:27:75.18:849,75,0	1/1:0,8:8:18.05:208,18,0	1/1:3,17:20:54.16:618,54,0	1/1:0,19:19:53.95:623,54,0	1/1:3,12:15:30.09:342,30,0	1/1:3,28:32:72.05:811,72,0	1/1:2,25:27:66.19:761,66,0	1/1:3,22:25:57.17:658,57,0	1/1:2,1:3:3.01:35,3,0
chr10	26737877	.	GA	G	20702.27	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=1.610;DP=731;FS=5.938;HRun=4;HaplotypeScore=76.2855;InbreedingCoeff=0.9630;MQ=92.98;MQ0=0;MQRankSum=-10.042;QD=32.45;ReadPosRankSum=7.155;VQSLOD=4.6320;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,43:44:99:1367,114,0	1/1:0,8:8:24.07:288,24,0	0/0:25,0:25:69.01:0,69,921	0/0:37,0:37:99:0,102,1326	1/1:0,32:32:87.27:1043,87,0	1/1:1,23:24:60.18:719,60,0	1/1:1,27:28:75.23:900,75,0	1/1:2,36:38:99:1260,108,0	1/1:0,22:22:66.20:790,66,0	1/1:1,36:37:99:1295,108,0	1/1:0,19:19:51.07:592,51,0	1/1:3,23:26:69.21:827,69,0	1/1:1,27:28:78.24:935,78,0	1/1:0,26:26:72.22:863,72,0	0/0:31,0:31:93.30:0,93,1285	1/1:2,27:29:72.22:863,72,0	1/1:1,14:15:39.12:468,39,0	1/1:1,13:14:36.11:432,36,0	1/1:0,22:22:66.17:768,66,0	1/1:2,30:32:90.19:1060,90,0	1/1:0,33:33:84.26:1007,84,0	1/1:1,26:27:75.23:899,75,0	1/1:0,24:24:63.09:755,63,0	1/1:1,29:30:81.25:971,81,0	1/1:2,27:29:69.21:827,69,0	1/1:1,21:22:63.15:729,63,0	1/1:0,27:27:81.25:971,81,0	1/1:2,0:2:6.02:71,6,0
chr10	26738614	.	T	TTTGTTGTTG	31129.84	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-8.609;DP=735;FS=4.425;HRun=0;HaplotypeScore=160.3762;InbreedingCoeff=0.8753;MQ=65.70;MQ0=3;MQRankSum=-8.640;QD=47.75;ReadPosRankSum=3.686;VQSLOD=4.5159;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,14:26:12.04:557,12,0	1/1:6,8:14:12.04:465,12,0	0/0:31,0:30:36.26:0,36,680	0/0:21,0:20:38.98:0,39,551	1/1:10,19:33:41.96:1312,42,0	1/1:7,19:28:39.13:1807,39,0	1/1:11,9:26:18.06:835,18,0	1/1:22,0:34:36.09:516,36,0	1/1:7,22:33:42.14:1947,42,0	1/1:14,26:42:78.24:2886,78,0	1/1:8,14:22:24.08:847,24,0	1/1:6,20:29:30.10:1391,30,0	1/1:7,27:34:54.19:2497,54,0	1/1:13,17:35:45.15:2087,45,0	0/0:30,0:30:75.24:0,75,1993	1/1:6,25:35:51.18:2366,51,0	1/1:8,9:19:8.26:524,8,0	1/1:8,6:14:15.05:697,15,0	1/1:13,7:22:30.05:953,30,0	1/1:14,20:36:36.07:1098,36,0	1/1:9,6:16:4.57:143,5,0	1/1:5,9:16:27:737,27,0	1/1:8,9:19:9.03:344,9,0	1/1:8,11:21:24.08:1053,24,0	1/1:6,6:13:14.75:689,15,0	1/1:6,16:23:39.12:1489,39,0	1/1:16,27:48:69.24:3193,69,0	1/1:1,8:10:15.05:696,15,0
chr10	26739835	.	AC	A	21157.11	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=3.929;DP=665;FS=13.519;HRun=2;HaplotypeScore=74.6879;InbreedingCoeff=0.9971;MQ=89.56;MQ0=0;MQRankSum=-8.606;QD=35.98;ReadPosRankSum=4.565;VQSLOD=4.2316;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,28:30:75.24:974,75,0	1/1:1,15:16:41.93:543,42,0	0/0:25,0:25:75.24:0,75,1085	0/0:25,0:25:57.95:0,58,833	1/1:0,19:19:54.17:695,54,0	1/1:1,28:29:78.25:1013,78,0	1/1:0,22:22:54.18:702,54,0	1/1:2,31:33:93.29:1194,93,0	1/1:1,24:25:72.23:935,72,0	1/1:2,23:25:68.95:878,69,0	1/1:0,14:14:42.14:545,42,0	1/1:0,19:19:57.19:740,57,0	1/1:0,35:35:99:1310,102,0	1/1:1,26:27:78.25:1013,78,0	0/0:27,0:27:81.27:0,81,1214	1/1:0,32:32:90.29:1169,90,0	1/1:1,19:20:54.18:701,54,0	1/1:0,16:16:45.15:584,45,0	1/1:0,16:16:48.15:610,48,0	1/1:0,26:26:66.21:857,66,0	1/1:0,27:27:78.25:1013,78,0	1/1:0,21:21:63.20:814,63,0	1/1:2,25:27:60.19:779,60,0	1/1:0,24:24:69.22:896,69,0	1/1:0,24:24:66.21:857,66,0	1/1:0,20:20:60.19:777,60,0	1/1:0,35:35:99:1324,102,0	1/1:0,6:6:18.06:234,18,0
chr10	26740264	.	TA	T	11066.56	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=5.758;DP=542;FS=5.467;HRun=9;HaplotypeScore=53.5251;InbreedingCoeff=0.9959;MQ=77.21;MQ0=0;MQRankSum=-2.294;QD=24.11;ReadPosRankSum=5.631;VQSLOD=5.2350;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,15:20:44.06:390,44,0	1/1:0,8:8:24.01:220,24,0	0/0:12,0:12:18.03:0,18,188	0/0:9,0:10:20.63:0,21,198	1/1:2,27:29:72.02:659,72,0	1/1:3,19:22:57.03:522,57,0	1/1:0,9:9:27.01:247,27,0	0/0:31,0:31:78.23:0,78,899	1/1:1,23:24:63.03:577,63,0	1/1:2,16:18:48.02:439,48,0	1/1:2,33:35:96.05:879,96,0	1/1:2,19:21:54.03:494,54,0	1/1:0,25:25:69.04:631,69,0	1/1:1,9:10:27.01:247,27,0	0/0:16,0:16:42.12:0,42,485	1/1:1,22:23:63.03:577,63,0	0/0:14,0:14:33.10:0,33,380	1/1:0,15:15:39.02:357,39,0	1/1:3,19:22:57.02:517,57,0	1/1:2,22:24:66.03:604,66,0	1/1:1,10:11:30.02:275,30,0	1/1:2,14:16:42.02:384,42,0	1/1:1,26:27:75.04:686,75,0	1/1:0,17:17:51.03:467,51,0	1/1:3,20:23:54.02:494,54,0	1/1:1,13:14:39.01:357,39,0	1/1:3,30:33:74.94:686,75,0	1/1:0,13:13:39.02:357,39,0
chr10	26744813	.	AACAC	A	3154.76	PASS	AB=0.600;AC=45;AF=0.804;AN=56;BaseQRankSum=0.271;DP=518;FS=5.237;HRun=0;HaplotypeScore=137.9674;InbreedingCoeff=0.5545;MQ=38.75;MQ0=18;MQRankSum=1.790;QD=7.57;ReadPosRankSum=2.339;VQSLOD=2.6743;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:16,19:36:18.17:222,18,0	1/1:2,4:7:15.04:220,15,0	0/0:24,0:3:3.44:0,3,22	0/0:32,0:8:5.67:0,6,126	1/1:14,4:20:19.25:174,19,0	1/1:3,9:12:9.03:144,9,0	1/1:15,9:25:3.90:50,4,0	0/0:10,0:9:10.98:0,11,87	1/1:19,1:18:4.45:216,4,0	1/1:9,8:18:26.96:349,27,0	1/1:8,8:16:8.13:87,8,0	0/0:13,0:18:11.70:0,12,72	1/1:4,10:14:2.63:48,3,0	1/1:12,0:11:9.87:158,10,0	1/1:23,0:23:0:1,0,0	1/1:10,14:24:11.62:192,12,0	0/0:17,0:16:8.44:0,8,105	0/1:3,5:9:0.44:131,0,0	1/1:17,2:14:6.02:91,6,0	1/1:6,9:16:9.02:124,9,0	1/1:13,21:32:8.14:72,8,0	1/1:6,11:17:13.29:195,13,0	1/1:9,11:20:5.71:68,6,0	1/1:8,14:22:11.77:164,12,0	1/1:9,4:13:4.14:98,4,0	1/1:9,10:18:28.81:392,29,0	1/1:11,6:17:5.95:96,6,0	1/1:3,0:2:2.74:13,3,0
chr10	26746287	.	CA	C	9477.50	PASS	AB=1.000;AC=53;AF=0.946;AN=56;BaseQRankSum=-1.264;DP=492;FS=19.742;HRun=10;HaplotypeScore=121.2102;InbreedingCoeff=0.6099;MQ=70.10;MQ0=1;MQRankSum=-3.518;QD=19.83;ReadPosRankSum=3.375;VQSLOD=3.9587;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,7:9:23.99:207,24,0	1/1:1,13:14:38.98:337,39,0	0/1:15,0:13:11.33:11,0,59	0/0:13,0:12:15.02:0,15,151	1/1:2,30:32:74.74:650,75,0	1/1:7,10:17:35.83:311,36,0	1/1:0,9:9:26.99:234,27,0	1/1:6,14:20:44.96:387,45,0	1/1:2,13:15:38.98:337,39,0	1/1:7,17:24:53.98:467,54,0	1/1:6,21:27:68.96:595,69,0	1/1:2,12:14:35.98:311,36,0	1/1:4,18:21:23.81:434,24,0	1/1:4,12:15:32.45:306,32,0	1/1:4,23:27:68.83:597,69,0	1/1:5,15:20:43.58:404,44,0	1/1:1,12:12:32.99:285,33,0	1/1:0,6:6:18:155,18,0	1/1:3,11:14:32.79:285,33,0	1/1:8,24:32:74.94:649,75,0	1/1:2,2:4:6:52,6,0	1/1:7,7:14:26.66:232,27,0	1/1:6,15:21:44.38:388,44,0	1/1:1,7:8:20.99:181,21,0	1/1:10,15:25:53.97:467,54,0	1/1:7,15:22:47.96:414,48,0	1/1:6,23:28:65.96:571,66,0	1/1:1,8:9:23.99:208,24,0
chr10	26746300	.	AAG	A	8276.19	PASS	AB=0.947;AC=47;AF=0.839;AN=56;BaseQRankSum=8.399;DP=518;FS=61.359;HRun=0;HaplotypeScore=156.8190;InbreedingCoeff=0.3156;MQ=66.79;MQ0=1;MQRankSum=-2.314;QD=16.96;ReadPosRankSum=8.700;VQSLOD=2.2646;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,0:9:15.14:126,15,0	1/1:15,1:16:45.36:343,45,0	0/0:12,0:10:20.66:0,21,296	0/0:18,0:16:29.48:0,29,462	1/1:32,1:33:83.01:618,83,0	1/1:14,2:16:46.54:324,47,0	1/1:11,1:12:18.22:233,18,0	1/1:28,0:28:29.73:519,30,0	1/1:17,0:17:14.03:271,14,0	1/1:20,1:21:46.61:328,47,0	1/1:27,1:28:8.54:408,9,0	1/1:15,0:15:41.49:304,41,0	1/1:21,1:21:13.12:310,13,0	1/1:14,2:15:15.30:319,15,0	1/1:28,2:30:79.37:603,79,0	1/1:18,3:21:27.13:406,27,0	0/1:16,1:16:22.81:214,0,23	1/1:8,0:8:23.71:173,24,0	0/1:14,2:16:63.17:196,0,63	0/1:34,2:36:82.77:463,0,83	0/1:5,0:5:8.94:29,0,9	1/1:10,2:12:35.53:269,36,0	1/1:20,0:20:25.80:297,26,0	1/1:9,0:9:23.77:196,24,0	1/1:20,0:20:50.90:373,51,0	0/1:21,1:22:80.05:294,0,80	1/1:28,0:27:8.92:394,9,0	1/1:10,1:11:32.68:263,33,0
chr10	26746302	.	G	GAA	24778.82	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-3.236;DP=530;FS=16.222;HRun=3;HaplotypeScore=106.6065;InbreedingCoeff=0.9435;MQ=63.98;MQ0=1;MQRankSum=-5.885;QD=49.26;ReadPosRankSum=2.712;VQSLOD=3.4184;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,8:10:27.02:435,27,0	1/1:2,14:16:48.16:874,48,0	0/0:10,0:8:21.04:0,21,263	0/0:17,0:15:31.61:0,32,388	1/1:3,31:34:93.31:1704,93,0	1/1:5,11:16:48.16:881,48,0	1/1:3,10:13:36.12:642,36,0	1/1:3,29:32:96.12:1562,96,0	1/1:2,16:18:54.17:960,54,0	1/1:3,19:22:63.21:1151,63,0	1/1:4,24:28:81.18:1409,81,0	1/1:0,15:15:45.15:838,45,0	1/1:5,17:21:63.16:1055,63,0	1/1:5,12:16:45.15:802,45,0	1/1:5,25:30:90.28:1572,90,0	1/1:4,17:21:60.21:1085,60,0	1/1:6,11:16:39.09:640,39,0	1/1:0,8:8:24.08:447,24,0	1/1:10,6:16:39.85:631,40,0	1/1:12,25:37:99:1675,99,0	1/1:0,5:5:6.02:112,6,0	1/1:4,9:13:36.12:638,36,0	1/1:4,16:20:57.14:978,57,0	1/1:1,8:9:24.08:434,24,0	1/1:2,19:21:63.17:1119,63,0	1/1:6,16:22:60.16:1046,60,0	1/1:6,24:29:87.25:1473,87,0	1/1:1,10:11:33.11:616,33,0
chr10	26746365	.	GAAA	G	12071.47	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-2.759;DP=517;FS=0.000;HRun=14;HaplotypeScore=115.4682;InbreedingCoeff=0.8941;MQ=61.79;MQ0=2;MQRankSum=-2.329;QD=24.54;ReadPosRankSum=4.355;VQSLOD=3.8894;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,5:5:12.01:140,12,0	1/1:2,8:10:24.03:280,24,0	0/0:15,0:11:11.76:0,12,103	0/0:9,0:4:5.60:0,6,44	1/1:8,20:30:52.40:607,52,0	1/1:5,12:18:38.98:438,39,0	1/1:2,10:12:21.04:245,21,0	1/1:3,25:30:65.47:824,65,0	1/1:5,17:22:37.83:454,38,0	1/1:7,22:29:60.03:686,60,0	1/1:3,20:23:57.12:665,57,0	1/1:1,10:11:27.07:315,27,0	1/1:4,17:23:34:590,34,0	1/1:2,18:21:51.05:579,51,0	1/1:3,15:20:50.92:544,51,0	1/1:6,11:18:28.49:330,28,0	1/1:1,14:16:36.02:403,36,0	1/1:1,10:11:27.06:315,27,0	1/1:5,11:19:18.22:379,18,0	1/1:7,19:28:59.87:664,60,0	1/1:0,13:13:30.09:351,30,0	1/1:3,9:14:23.97:293,24,0	1/1:4,19:23:47.89:560,48,0	1/1:0,17:17:39.12:455,39,0	1/1:8,14:23:50.90:558,51,0	1/1:8,10:18:30.02:350,30,0	1/1:4,20:25:54.28:660,54,0	1/1:2,11:13:33.05:385,33,0
chr10	26758419	.	GAACCT	G	2280.47	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=0.583;DP=568;FS=4.896;HRun=0;HaplotypeScore=124.0176;InbreedingCoeff=0.9960;MQ=79.88;MQ0=0;MQRankSum=-4.292;QD=45.61;ReadPosRankSum=-1.830;VQSLOD=3.1145;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:48.16:0,48,1448	0/0:12,0:12:36.12:0,36,1095	0/0:15,0:15:42.14:0,42,1153	0/0:20,0:20:57.19:0,57,1639	0/0:31,0:31:90.31:0,90,2768	0/0:20,0:20:57.20:0,57,1766	0/0:12,0:12:36.12:0,36,1116	1/1:6,22:28:66.18:1297,66,0	0/0:21,0:21:60.21:0,60,1840	0/0:26,0:26:72.24:0,72,2149	0/0:28,0:28:81.28:0,81,2487	0/0:10,0:10:27.09:0,27,836	0/0:34,0:34:96.33:0,96,2918	0/0:22,0:22:66.23:0,66,2046	1/1:0,11:11:30.10:622,30,0	0/0:10,0:10:27.09:0,27,836	1/1:1,10:11:24.08:504,24,0	0/0:12,0:12:36.12:0,36,1062	0/0:17,0:17:45.13:0,45,1325	0/0:44,0:44:99:0,132,3878	0/0:16,0:16:48.15:0,48,1419	0/0:32,0:32:78.27:0,78,2377	0/0:25,0:25:72.25:0,72,2230	0/0:9,0:9:24.08:0,24,743	0/0:18,0:18:48.16:0,48,1471	0/0:28,0:28:78.27:0,78,2396	0/0:32,0:32:87.30:0,87,2680	0/0:7,0:7:21.07:0,21,650
chr10	26758873	.	AG	A	11572.56	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=2.092;DP=564;FS=4.285;HRun=8;HaplotypeScore=111.9167;InbreedingCoeff=0.9820;MQ=71.00;MQ0=0;MQRankSum=-3.317;QD=22.30;ReadPosRankSum=5.171;VQSLOD=4.2265;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,13:19:33.04:318,33,0	1/1:2,4:6:15.02:144,15,0	0/0:25,0:23:61.88:0,62,741	0/0:20,0:18:42.53:0,43,467	1/1:8,15:23:56.38:514,56,0	1/1:10,23:33:72.10:695,72,0	1/1:1,16:17:39.06:377,39,0	1/1:5,26:31:78.10:743,78,0	1/1:4,22:26:51.07:492,51,0	1/1:5,10:15:39.05:373,39,0	1/1:7,17:24:28.99:418,29,0	1/1:3,16:19:42.06:406,42,0	1/1:2,22:24:60.10:579,60,0	1/1:1,23:24:63.10:608,63,0	1/1:2,21:23:57.09:550,57,0	1/1:1,24:25:60.09:579,60,0	1/1:4,15:19:30.04:290,30,0	1/1:2,13:16:41.10:382,41,0	1/1:2,17:19:51.07:489,51,0	1/1:4,26:30:75:703,75,0	1/1:2,17:19:51.08:491,51,0	1/1:5,8:13:18.02:173,18,0	1/1:1,9:10:30.05:288,30,0	1/1:0,13:13:36.06:348,36,0	1/1:3,11:14:27.04:260,27,0	1/1:3,14:17:45.04:423,45,0	1/1:4,30:34:78.12:753,78,0	1/1:0,6:6:18.03:174,18,0
chr10	26759786	.	GA	G	13028.74	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=1.433;DP=510;FS=1.815;HRun=7;HaplotypeScore=85.9390;InbreedingCoeff=0.9231;MQ=77.52;MQ0=1;MQRankSum=-7.717;QD=27.09;ReadPosRankSum=4.789;VQSLOD=5.2362;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,16:17:48.11:490,48,0	1/1:0,10:10:30.07:306,30,0	0/0:12,0:11:15.17:0,15,290	0/0:17,0:16:38.59:0,39,444	1/1:2,33:35:93.21:948,93,0	1/1:2,21:23:60.14:612,60,0	1/1:0,12:12:33.08:337,33,0	1/1:2,26:28:75.16:765,75,0	1/1:2,20:22:57.13:581,57,0	1/1:0,26:26:72.16:735,72,0	1/1:4,18:22:54.12:551,54,0	1/1:2,21:23:63.14:643,63,0	1/1:2,21:23:57.12:582,57,0	1/1:2,17:19:48.11:490,48,0	1/1:0,21:21:57.13:582,57,0	1/1:1,26:27:75.17:765,75,0	1/1:0,9:9:27.06:275,27,0	1/1:0,5:5:12.02:122,12,0	1/1:2,22:24:66.13:665,66,0	1/1:0,23:23:60.13:612,60,0	1/1:1,12:13:36.08:367,36,0	1/1:0,7:7:21.05:214,21,0	1/1:3,12:15:33.05:337,33,0	1/1:0,14:14:42.10:429,42,0	1/1:2,15:16:36.08:367,36,0	1/1:1,17:18:51.12:520,51,0	1/1:0,26:26:65.83:673,66,0	1/1:0,2:2:6.01:61,6,0
chr10	26760076	.	TTCTCTCTC	T	16218.50	PASS	AB=0.663;AC=42;AF=0.750;AN=56;BaseQRankSum=1.252;DP=503;FS=12.868;HRun=0;HaplotypeScore=135.0831;InbreedingCoeff=0.5415;MQ=67.26;MQ0=6;MQRankSum=-3.256;QD=41.91;ReadPosRankSum=4.510;VQSLOD=4.0272;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:10,11:20:36.60:447,0,37	1/1:0,4:4:12.04:291,12,0	0/0:21,0:11:5.69:0,6,136	0/0:28,0:15:15.25:0,15,137	1/1:5,19:24:54.11:1272,54,0	1/1:7,17:24:33.11:856,33,0	0/1:2,7:9:36.91:122,0,37	0/0:32,0:32:69.20:0,69,1815	1/1:3,13:16:24.08:602,24,0	1/1:10,17:26:48.13:1053,48,0	1/1:4,23:27:59.97:1233,60,0	1/1:2,16:18:36.12:934,36,0	1/1:3,10:13:21.07:545,21,0	1/1:2,13:15:33.11:856,33,0	0/0:6,0:16:12.03:0,12,314	1/1:3,16:19:36.12:934,36,0	0/0:13,0:19:15.05:0,15,457	0/1:7,2:9:86:256,0,86	1/1:5,12:17:38.99:508,39,0	1/1:8,18:25:51.11:1189,51,0	1/1:3,0:3:8.74:111,9,0	1/1:0,11:12:33.03:718,33,0	1/1:2,12:14:30.10:754,30,0	0/1:3,5:8:39.59:221,0,40	1/1:4,14:17:24.08:582,24,0	1/1:7,16:24:41.31:1155,41,0	1/1:8,24:33:60.21:1499,60,0	1/1:2,4:6:3.01:78,3,0
chr10	26760905	.	CGTGTGT	C	575.68	PASS	AB=0.987;AC=15;AF=0.268;AN=56;BaseQRankSum=-7.388;DP=472;FS=6.898;HRun=0;HaplotypeScore=149.8560;InbreedingCoeff=-0.2238;MQ=38.52;MQ0=23;MQRankSum=6.509;QD=2.56;ReadPosRankSum=2.500;VQSLOD=2.0553;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:7:2.11:0,2,24	0/0:7,0:7:5.35:0,5,51	0/0:61,0:5:8.90:0,9,170	0/0:57,0:7:12.04:0,12,276	0/0:21,0:21:1.49:0,1,27	0/1:13,0:13:33.92:34,0,88	0/0:6,0:6:9.02:0,9,88	0/1:26,0:25:50.12:50,0,89	0/0:10,0:11:7.18:0,7,77	0/1:21,0:21:54.56:55,0,149	0/1:21,0:21:1.16:1,0,158	0/0:9,0:9:6:0,6,54	0/1:19,0:19:48.31:48,0,50	1/1:10,5:15:0.89:2,1,0	0/0:7,0:7:3:0,3,26	0/0:12,0:12:12:0,12,103	0/0:5,0:5:5.04:0,5,33	0/1:4,0:4:33.47:35,0,33	0/1:11,1:12:60.67:212,0,61	0/1:24,0:24:54.64:55,0,228	0/0:17,0:16:2.45:0,2,48	0/0:4,0:4:3:0,3,28	0/0:13,0:13:9.02:0,9,109	1/1:10,0:10:5.99:70,6,0	0/1:12,0:13:43.19:43,0,134	0/1:23,0:23:54.06:54,0,279	0/1:24,0:24:57.11:57,0,254	0/0:8,0:8:5.97:0,6,46
chr10	26760918	.	G	GTATA	876.12	PASS	AB=0.923;AC=7;AF=0.130;AN=54;BaseQRankSum=-5.724;DP=432;FS=6.815;HRun=0;HaplotypeScore=144.8046;InbreedingCoeff=0.4839;MQ=40.97;MQ0=19;MQRankSum=2.047;QD=17.52;ReadPosRankSum=-5.247;VQSLOD=1.5075;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:7:5.99:0,6,27	0/0:5,0:5:7.34:0,7,26	0/0:50,0:6:12.04:0,12,181	0/0:52,0:8:7.68:0,8,124	0/0:21,0:21:12.98:0,13,63	0/0:15,0:15:12.85:0,13,73	0/0:7,0:7:7.34:0,7,25	1/1:6,20:27:61.51:858,62,0	0/0:8,0:8:9.46:0,9,32	0/0:16,0:16:23.87:0,24,148	0/0:21,0:21:21.66:0,22,121	0/0:10,0:10:7.58:0,8,39	0/0:17,0:17:21.15:0,21,136	./.	1/1:1,0:5:3.01:53,3,0	0/0:13,0:13:9.46:0,9,32	1/1:1,4:5:3.01:74,3,0	0/0:6,0:6:9.90:0,10,57	0/0:12,0:12:21.05:0,21,190	0/0:23,0:23:35.98:0,36,167	0/0:11,0:10:8.38:0,8,82	0/0:4,0:4:2.37:0,2,8	0/1:11,0:12:17.10:17,0,21	0/0:5,0:5:4.43:0,4,63	0/0:13,0:13:19.59:0,20,68	0/0:19,0:19:37.77:0,38,179	0/0:26,0:26:37.98:0,38,204	0/0:10,0:9:10.86:0,11,56
chr10	26760920	.	G	GTA	5419.74	PASS	AB=0.715;AC=44;AF=0.815;AN=54;BaseQRankSum=3.375;DP=404;FS=0.000;HRun=0;HaplotypeScore=118.9243;InbreedingCoeff=0.0929;MQ=41.01;MQ0=17;MQRankSum=0.876;QD=17.95;ReadPosRankSum=4.590;VQSLOD=5.0017;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,3:7:5.80:65,6,0	1/1:0,5:5:9.03:145,9,0	0/0:45,0:7:11.86:0,12,106	0/0:45,0:8:2.75:0,3,39	1/1:2,19:21:12.04:195,12,0	1/1:2,13:15:12.13:195,12,0	1/1:0,7:7:9.03:144,9,0	1/1:19,0:18:1.42:238,1,0	1/1:4,4:8:12.04:196,12,0	1/1:7,9:16:35.64:475,36,0	0/1:5,15:20:5.40:319,0,5	1/1:2,8:10:6.02:98,6,0	1/1:4,13:17:2.92:259,3,0	./.	1/1:4,0:4:3:26,3,0	1/1:2,11:13:14.97:213,15,0	1/1:4,0:4:3:26,3,0	0/1:4,1:6:8.10:90,0,8	0/1:6,6:12:0.85:196,0,1	1/1:5,17:22:34:581,34,0	0/1:4,4:8:18.01:43,0,18	1/1:3,1:4:3.01:49,3,0	0/1:8,4:12:9.84:88,0,10	0/1:3,1:4:17.96:18,0,26	1/1:5,8:13:24.04:361,24,0	1/1:3,17:20:42.81:696,43,0	1/1:5,20:25:23.51:572,24,0	1/1:1,8:8:11.90:132,12,0
chr10	26761727	.	C	CT	13580.19	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=3.095;DP=535;FS=5.361;HRun=6;HaplotypeScore=118.1136;InbreedingCoeff=0.9780;MQ=88.79;MQ0=0;MQRankSum=-4.439;QD=31.73;ReadPosRankSum=5.126;VQSLOD=3.3690;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,5:8:15.05:189,15,0	1/1:0,12:12:36.12:453,36,0	0/0:23,0:23:57.11:0,57,571	0/0:16,0:16:36.08:0,36,365	1/1:4,27:31:75.16:908,75,0	1/1:1,23:24:66.20:819,66,0	1/1:0,17:17:39.12:491,39,0	0/0:39,0:39:99:0,102,1022	1/1:0,12:12:36.12:453,36,0	1/1:3,22:25:69.20:853,69,0	1/1:1,16:17:48.15:604,48,0	1/1:3,17:20:57.16:694,57,0	1/1:3,19:22:51.16:642,51,0	1/1:1,21:22:57.18:717,57,0	0/0:21,0:21:57.13:0,57,581	1/1:3,17:20:48.15:604,48,0	0/0:8,0:8:21.05:0,21,214	1/1:1,11:12:27.09:339,27,0	1/1:1,5:6:15.03:175,15,0	1/1:3,24:27:61.39:728,61,0	1/1:0,21:21:57.18:717,57,0	1/1:1,20:21:57.18:717,57,0	1/1:0,19:19:51.05:642,51,0	1/1:0,12:12:36.12:453,36,0	1/1:1,15:16:45.14:566,45,0	1/1:1,23:24:63.19:779,63,0	1/1:3,29:32:75.20:926,75,0	1/1:3,5:8:9.03:113,9,0
chr10	26762214	.	CA	C	630.49	PASS	AC=2;AF=0.037;AN=54;BaseQRankSum=5.310;DP=542;FS=7.835;HRun=1;HaplotypeScore=97.3648;InbreedingCoeff=0.9785;MQ=72.57;MQ0=0;MQRankSum=-4.200;QD=30.02;ReadPosRankSum=-2.674;VQSLOD=2.0806;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:42.13:0,42,642	0/0:6,0:6:18.06:0,18,288	0/0:8,0:8:24.06:0,24,344	0/0:12,0:11:16.42:0,16,407	0/0:31,0:31:90.31:0,90,1438	0/0:19,0:19:57.18:0,57,886	0/0:17,0:17:51.14:0,51,768	1/1:1,20:21:54.16:725,54,0	0/0:30,0:30:90.31:0,90,1439	0/0:26,0:26:78.15:0,78,1196	0/0:21,0:21:63.21:0,63,1004	0/0:20,0:20:60.20:0,60,959	0/0:20,0:20:60.20:0,60,959	0/0:26,0:26:78.25:0,78,1223	0/0:26,0:26:78.27:0,78,1245	0/0:17,0:17:51.17:0,51,812	0/0:17,0:17:51.17:0,51,815	0/0:13,0:13:39.06:0,39,578	0/0:15,0:15:45.13:0,45,694	0/0:25,0:25:75.24:0,75,1176	0/0:20,0:20:57.19:0,57,907	0/0:21,0:21:63.20:0,63,984	0/0:18,0:18:54.17:0,54,838	0/0:11,0:11:33.10:0,33,503	0/0:20,0:20:57.18:0,57,888	0/0:32,0:32:96.32:0,96,1513	0/0:36,0:36:99:0,108,1675	./.
chr10	26762603	.	C	CTT	27607.25	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=2.691;DP=509;FS=2.868;HRun=0;HaplotypeScore=147.6128;InbreedingCoeff=0.9456;MQ=70.35;MQ0=0;MQRankSum=-7.930;QD=56.81;ReadPosRankSum=3.443;VQSLOD=4.7660;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,9:9:27.09:524,27,0	1/1:1,7:8:24.04:446,24,0	0/0:15,0:15:41.87:0,42,603	0/0:8,0:8:24.08:0,24,377	1/1:5,21:26:69.22:1364,69,0	1/1:5,20:25:66.18:1277,66,0	1/1:0,11:11:33.11:670,33,0	1/1:2,22:25:75.24:1488,75,0	1/1:2,11:13:39.13:791,39,0	1/1:4,29:33:96.33:1948,96,0	1/1:2,27:29:84.29:1697,84,0	1/1:0,21:21:63.22:1278,63,0	1/1:2,15:17:51.17:1013,51,0	1/1:0,13:13:39.13:791,39,0	1/1:1,16:17:51.18:1036,51,0	1/1:3,19:22:60.21:1218,60,0	1/1:0,18:19:51.18:1036,51,0	1/1:0,12:12:33.11:670,33,0	1/1:3,14:17:51.14:996,51,0	1/1:6,27:33:87.26:1724,87,0	1/1:2,5:7:15.05:281,15,0	1/1:7,15:22:60.15:1131,60,0	1/1:4,24:28:81.23:1601,81,0	1/1:0,3:3:9.03:182,9,0	1/1:3,20:23:69.21:1321,69,0	1/1:0,17:17:51.18:1036,51,0	1/1:2,30:32:93.28:1846,93,0	1/1:0,4:4:12.04:244,12,0
chr10	26762648	.	CTTATA	C	19533.49	PASS	AC=44;AF=0.815;AN=54;BaseQRankSum=8.535;DP=509;FS=0.438;HRun=0;HaplotypeScore=170.9782;InbreedingCoeff=0.9563;MQ=74.75;MQ0=0;MQRankSum=-10.659;QD=47.88;ReadPosRankSum=5.427;VQSLOD=5.0027;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,7:9:18.06:368,18,0	1/1:2,8:10:24.08:485,24,0	0/0:22,0:22:51.17:0,51,1479	0/0:10,0:10:30.09:0,30,731	1/1:1,22:23:54.19:1060,54,0	1/1:3,19:22:51.18:1037,51,0	1/1:2,8:10:24.08:484,24,0	0/0:28,0:28:81.28:0,81,2421	1/1:0,17:17:42.14:847,42,0	1/1:4,30:34:93.29:1808,93,0	1/1:6,22:28:60.21:1220,60,0	1/1:3,16:19:42.14:853,42,0	1/1:1,14:15:45.14:872,45,0	1/1:1,14:15:39.13:790,39,0	0/0:18,0:18:48.16:0,48,1389	1/1:2,16:18:39.13:791,39,0	0/0:20,0:20:51.18:0,51,1525	1/1:3,3:6:6.02:123,6,0	1/1:0,18:18:54.17:1069,54,0	1/1:3,31:34:90.31:1818,90,0	1/1:0,9:9:15.05:293,15,0	1/1:4,16:20:57.18:1075,57,0	1/1:5,28:33:69.22:1371,69,0	1/1:0,5:5:9.03:184,9,0	1/1:4,12:16:36.12:730,36,0	1/1:1,17:18:51.16:1008,51,0	1/1:4,25:29:63.20:1246,63,0	./.
chr10	26764824	.	T	TATG	25930.46	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-12.327;DP=727;FS=2.552;HRun=0;HaplotypeScore=83.0311;InbreedingCoeff=0.9224;MQ=55.92;MQ0=8;MQRankSum=0.203;QD=43.73;ReadPosRankSum=2.819;VQSLOD=6.4909;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,30:39:43.42:1389,43,0	1/1:2,12:14:30.10:629,30,0	0/0:14,0:1:2.98:0,3,22	0/0:16,0:3:6:0,6,66	1/1:3,32:37:81.28:1695,81,0	1/1:3,23:27:63.22:1319,63,0	1/1:5,17:22:27.09:537,27,0	0/0:37,0:34:69.23:0,69,1029	1/1:7,23:31:75.26:1559,75,0	1/1:3,28:31:81.28:1682,81,0	1/1:6,24:31:63.22:1307,63,0	1/1:6,8:14:21.07:438,21,0	1/1:5,28:33:75.26:1569,75,0	1/1:3,19:23:54.19:1130,54,0	0/0:38,0:38:99:0,99,1474	1/1:4,21:25:57.20:1186,57,0	0/0:29,0:29:78.25:0,78,1143	1/1:2,16:18:14.98:968,15,0	1/1:11,12:20:36.12:741,36,0	1/1:6,32:38:84.29:1758,84,0	1/1:6,11:17:21.07:440,21,0	1/1:5,24:30:69.24:1435,69,0	1/1:4,22:27:51.17:1068,51,0	1/1:2,13:15:36.12:754,36,0	1/1:1,24:26:60.21:1256,60,0	1/1:9,17:26:57.16:1061,57,0	1/1:9,27:35:81.28:1696,81,0	1/1:2,5:7:15.05:314,15,0
chr10	26765944	.	CA	C	24658.16	PASS	AB=0.521;AC=51;AF=0.911;AN=56;BaseQRankSum=-4.083;DP=707;FS=3.339;HRun=1;HaplotypeScore=73.4649;InbreedingCoeff=0.7590;MQ=64.18;MQ0=15;MQRankSum=4.541;QD=39.20;ReadPosRankSum=5.481;VQSLOD=5.3053;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,25:25:75.25:1047,75,0	1/1:0,9:9:27.09:377,27,0	0/0:41,0:15:39.05:0,39,531	0/0:37,0:17:40.59:0,41,624	1/1:0,33:33:99:1383,99,0	1/1:0,32:32:90.30:1258,90,0	1/1:0,15:15:39.13:544,39,0	1/1:0,31:27:81.26:1112,81,0	1/1:0,23:23:60.20:839,60,0	1/1:0,28:28:84.23:1120,84,0	1/1:0,26:26:75.25:1047,75,0	1/1:0,24:24:69.23:963,69,0	1/1:0,37:37:99:1551,111,0	1/1:0,22:22:66.22:921,66,0	1/1:0,27:27:72.24:1006,72,0	1/1:0,36:36:99:1468,105,0	0/1:2,23:25:20.83:772,0,21	1/1:1,19:20:35.98:772,36,0	1/1:0,8:7:18.06:250,18,0	1/1:0,27:27:81.27:1132,81,0	1/1:0,20:20:60.20:838,60,0	1/1:0,24:24:63.21:881,63,0	1/1:0,23:23:69.23:964,69,0	1/1:0,14:14:39.13:545,39,0	1/1:1,27:28:78.26:1090,78,0	1/1:0,29:29:84.28:1174,84,0	1/1:1,39:40:82.49:1478,82,0	1/1:0,3:3:9.03:126,9,0
chr10	26768450	.	TA	T	1503.65	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.665;DP=574;FS=2.469;HRun=7;HaplotypeScore=57.5979;InbreedingCoeff=0.9604;MQ=64.42;MQ0=1;MQRankSum=0.155;QD=21.48;ReadPosRankSum=-2.222;VQSLOD=2.5614;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:34.62:0,35,484	0/0:7,0:7:18.06:0,18,226	0/0:13,0:13:35.86:0,36,359	0/0:15,0:14:29.59:0,30,339	0/0:27,0:27:81.26:0,81,1019	0/0:21,0:21:57.17:0,57,706	0/0:16,0:16:48.14:0,48,590	1/1:5,24:29:69.14:698,69,0	0/0:25,0:25:72.22:0,72,885	0/0:26,0:26:75.22:0,75,904	0/0:31,0:31:90.29:0,90,1132	0/0:18,0:18:54.17:0,54,679	0/0:21,0:21:60.19:0,60,755	0/0:23,0:23:66.20:0,66,817	1/1:1,21:22:54.12:551,54,0	0/0:25,0:25:69.20:0,69,854	1/1:4,15:19:39.08:397,39,0	0/0:24,0:24:66.12:0,66,798	0/0:14,0:14:33.10:0,33,407	0/0:29,0:29:75.22:0,75,919	0/0:12,0:12:33.09:0,33,401	0/0:14,0:14:39.12:0,39,491	0/0:16,0:16:36.12:0,36,453	0/0:20,0:20:60.19:0,60,755	0/0:35,0:35:99:0,99,1230	0/0:31,0:31:87.26:0,87,1072	0/0:22,0:22:63.20:0,63,792	0/0:4,0:4:6.02:0,6,75
chr10	26768989	.	C	CA	23746.60	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-7.891;DP=674;FS=7.890;HRun=2;HaplotypeScore=61.6079;InbreedingCoeff=0.9912;MQ=69.13;MQ0=0;MQRankSum=-4.879;QD=37.51;ReadPosRankSum=5.108;VQSLOD=5.0999;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,22:26:63.17:883,63,0	1/1:0,10:10:27.09:389,27,0	0/0:21,1:20:51.09:0,51,593	0/0:19,0:19:54.16:0,54,650	1/1:0,39:39:99:1426,99,0	1/1:2,32:34:93.31:1339,93,0	1/1:2,16:18:39.13:562,39,0	1/1:1,33:29:87.27:1225,87,0	1/1:0,16:16:45.15:648,45,0	1/1:3,32:35:99:1381,99,0	1/1:2,27:29:62.89:907,63,0	1/1:1,23:24:66.22:950,66,0	1/1:1,21:22:57.19:821,57,0	1/1:0,25:25:69.23:994,69,0	1/1:2,30:32:87.29:1253,87,0	1/1:0,16:16:48.16:691,48,0	1/1:3,16:19:48.16:691,48,0	1/1:2,14:16:39.13:561,39,0	1/1:3,29:29:84.26:1168,84,0	1/1:1,38:39:99:1530,108,0	1/1:0,16:16:45.15:648,45,0	1/1:0,15:15:39.13:561,39,0	1/1:0,21:21:56.88:820,57,0	1/1:2,14:16:36.12:518,36,0	1/1:0,28:28:74.93:1080,75,0	1/1:2,21:23:63.66:887,64,0	1/1:4,38:42:99:1595,111,0	1/1:0,6:6:15.05:216,15,0
chr10	26769486	.	T	TA	15032.80	PASS	AB=0.615;AC=45;AF=0.804;AN=56;BaseQRankSum=-7.906;DP=648;FS=8.801;HRun=6;HaplotypeScore=68.6276;InbreedingCoeff=0.8882;MQ=59.59;MQ0=0;MQRankSum=4.502;QD=28.47;ReadPosRankSum=1.105;VQSLOD=5.3284;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,20:20:45.14:566,45,0	1/1:1,13:14:36.12:453,36,0	0/0:21,0:17:33.06:0,33,335	0/0:11,0:11:15.05:0,15,222	1/1:4,25:29:72.23:906,72,0	1/1:3,30:33:69.22:868,69,0	1/1:0,12:12:36.11:448,36,0	0/0:31,0:31:81.18:0,81,826	1/1:5,19:24:45.14:566,45,0	1/1:3,20:23:60.17:739,60,0	1/1:1,18:19:51.16:642,51,0	1/1:2,13:14:27.09:340,27,0	1/1:2,29:32:63.19:793,63,0	1/1:3,20:23:36.12:452,36,0	0/0:25,0:25:63.12:0,63,634	1/1:3,19:22:33.11:415,33,0	0/0:32,0:32:72.14:0,72,726	1/1:3,13:16:30.10:377,30,0	1/1:2,13:15:39.12:491,39,0	1/1:1,30:31:87.20:1060,87,0	1/1:2,16:18:42.13:526,42,0	1/1:3,29:32:84.14:1003,84,0	1/1:3,27:30:73.11:908,73,0	1/1:0,19:19:45.14:566,45,0	1/1:3,21:24:51.16:642,51,0	1/1:3,29:32:87.28:1095,87,0	1/1:5,31:36:81.25:1008,81,0	0/1:3,5:8:12.55:171,0,13
chr10	26770379	.	T	TA	9405.79	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-7.936;DP=410;FS=3.291;HRun=8;HaplotypeScore=41.1194;InbreedingCoeff=0.9599;MQ=66.36;MQ0=0;MQRankSum=0.640;QD=27.75;ReadPosRankSum=4.739;VQSLOD=4.8965;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,13:15:39.11:444,39,0	1/1:0,8:8:18.05:208,18,0	0/0:15,0:14:26.96:0,27,234	0/0:5,0:4:9:0,9,81	1/1:1,30:31:81.13:903,81,0	1/1:1,11:12:30.09:346,30,0	1/1:1,7:8:21.06:242,21,0	0/0:20,0:20:47.97:0,48,428	1/1:2,6:8:12.04:138,12,0	1/1:5,12:17:35.95:383,36,0	1/1:0,14:14:42.02:453,42,0	1/1:1,6:7:15.04:173,15,0	1/1:3,18:21:48.04:554,48,0	1/1:1,16:17:42.12:484,42,0	0/0:16,0:16:48:0,48,430	1/1:2,10:12:30.09:346,30,0	0/0:15,0:15:42.02:0,42,384	1/1:0,5:5:14.96:154,15,0	1/1:4,7:11:21.53:244,22,0	1/1:3,21:24:66.12:733,66,0	1/1:0,8:8:24.07:277,24,0	1/1:0,5:5:15.04:173,15,0	1/1:1,22:23:57.17:657,57,0	1/1:2,5:7:15.04:173,15,0	1/1:3,22:25:60.18:693,60,0	1/1:2,17:19:51.15:589,51,0	1/1:4,22:25:60.18:692,60,0	1/1:1,15:16:30.09:346,30,0
chr10	26772932	.	TA	T	1981.23	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=5.299;DP=560;FS=3.332;HRun=9;HaplotypeScore=62.0180;InbreedingCoeff=0.9615;MQ=73.81;MQ0=0;MQRankSum=-1.803;QD=21.08;ReadPosRankSum=0.791;VQSLOD=4.3816;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:78.20:0,78,880	0/0:6,0:6:15.04:0,15,173	0/0:11,0:11:25.31:0,25,266	0/0:9,0:9:18.05:0,18,207	0/0:26,0:26:66.20:0,66,762	0/0:21,0:21:52.93:0,53,565	0/0:13,0:13:33.10:0,33,381	1/1:6,27:33:80.96:724,81,0	0/0:18,0:18:45.12:0,45,511	0/0:29,0:29:78.21:0,78,884	0/0:18,1:19:12.89:0,13,382	0/0:12,0:12:33.10:0,33,381	0/0:31,0:31:90.27:0,90,1039	0/0:24,0:24:69.20:0,69,795	1/1:3,27:30:75.03:686,75,0	0/0:12,0:12:30.09:0,30,346	1/1:2,29:31:78.04:714,78,0	0/0:12,0:12:30.09:0,30,346	0/0:22,0:22:51.14:0,51,580	0/0:24,0:25:57.02:0,57,620	0/0:16,0:16:45.09:0,45,496	0/0:16,0:16:42.12:0,42,484	0/0:20,0:20:57.17:0,57,658	0/0:20,0:20:60.18:0,60,692	0/0:23,0:23:63.19:0,63,727	0/0:11,0:11:33.08:0,33,369	0/0:36,1:37:62.78:0,63,956	0/0:3,0:3:9.03:0,9,104
chr10	26773367	.	TA	T	9713.71	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=2.803;DP=497;FS=10.552;HRun=10;HaplotypeScore=133.5480;InbreedingCoeff=0.8924;MQ=68.78;MQ0=2;MQRankSum=-4.285;QD=20.41;ReadPosRankSum=3.789;VQSLOD=3.9747;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,19:19:50.59:416,51,0	1/1:1,7:8:15.46:131,15,0	0/0:14,0:12:17.89:0,18,167	0/0:7,0:7:6.65:0,7,82	1/1:8,18:25:50.34:411,50,0	1/1:0,23:23:59.99:520,60,0	1/1:1,13:14:33.46:287,33,0	1/1:11,19:30:59.95:517,60,0	1/1:3,17:20:47.99:416,48,0	1/1:6,14:20:44.98:390,45,0	1/1:3,22:24:59.88:505,60,0	1/1:5,15:20:41.98:364,42,0	1/1:3,9:11:26.99:234,27,0	1/1:3,21:24:63.05:531,63,0	1/1:3,18:21:45.46:391,45,0	1/1:1,12:13:35.99:312,36,0	1/1:2,16:18:44.99:390,45,0	1/1:3,7:10:20.99:182,21,0	1/1:0,9:9:26.99:234,27,0	1/1:3,15:18:38.98:338,39,0	1/1:2,5:7:12.47:105,12,0	1/1:2,19:21:53.98:468,54,0	1/1:3,21:24:57.93:496,58,0	1/1:1,11:12:29.99:260,30,0	1/1:2,19:21:45.46:391,45,0	1/1:1,16:17:47.96:411,48,0	1/1:3,38:41:99:936,108,0	1/1:0,3:3:9:78,9,0
chr10	26774472	.	GT	G	13522.86	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-2.959;DP=574;FS=0.000;HRun=8;HaplotypeScore=57.6106;InbreedingCoeff=0.9754;MQ=78.41;MQ0=0;MQRankSum=-7.184;QD=24.68;ReadPosRankSum=4.532;VQSLOD=5.2426;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,22:26:63.10:608,63,0	1/1:3,11:14:33.05:319,33,0	0/0:15,0:15:29.28:0,29,373	0/0:11,0:11:19.55:0,20,180	1/1:5,25:30:75.07:715,75,0	1/1:3,18:21:54.08:521,54,0	1/1:0,8:8:12.02:116,12,0	1/1:7,31:38:93.13:893,93,0	1/1:1,16:17:42.07:406,42,0	1/1:0,26:26:78.13:753,78,0	1/1:0,23:23:60.08:579,60,0	1/1:1,15:16:36.06:348,36,0	1/1:1,21:22:63.10:608,63,0	1/1:2,17:19:51.08:492,51,0	1/1:2,16:18:42.07:406,42,0	1/1:0,22:22:63.10:608,63,0	1/1:1,14:15:39.06:376,39,0	1/1:0,17:17:51.08:492,51,0	1/1:4,15:19:45.04:425,45,0	1/1:2,27:29:75.11:724,75,0	1/1:1,11:12:24.04:232,24,0	1/1:1,28:29:75.11:724,75,0	1/1:0,25:25:65.86:637,66,0	1/1:2,11:13:30.05:290,30,0	1/1:3,17:20:45.07:434,45,0	1/1:4,23:27:69.08:659,69,0	1/1:0,35:35:99:985,102,0	1/1:0,7:7:18.03:174,18,0
chr10	26774803	.	G	GATA	25249.01	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-1.818;DP=488;FS=0.000;HRun=0;HaplotypeScore=79.3809;InbreedingCoeff=0.9682;MQ=72.79;MQ0=0;MQRankSum=-6.611;QD=54.07;ReadPosRankSum=4.658;VQSLOD=7.0030;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,7:8:18.06:370,18,0	1/1:0,9:10:27.09:573,27,0	0/0:12,0:12:33.09:0,33,489	0/0:9,0:9:20.43:0,20,203	1/1:0,17:17:51.17:1108,51,0	1/1:0,22:23:57.20:1272,57,0	1/1:3,7:11:15.05:335,15,0	1/1:6,28:34:87.28:1794,87,0	1/1:1,13:15:33.11:736,33,0	1/1:2,25:28:81.26:1740,81,0	1/1:3,29:32:84.29:1874,84,0	1/1:3,9:14:21.07:468,21,0	1/1:2,14:16:39.13:840,39,0	1/1:1,16:18:42.14:936,42,0	1/1:0,18:19:54.19:1206,54,0	1/1:0,11:11:30.10:669,30,0	1/1:2,14:16:36.12:804,36,0	1/1:1,8:9:21.07:468,21,0	1/1:4,22:26:69.21:1435,69,0	1/1:3,23:27:60.21:1341,60,0	1/1:2,12:14:33.11:737,33,0	1/1:1,15:16:45.15:912,45,0	1/1:1,18:19:48.16:1071,48,0	1/1:1,7:8:18.06:402,18,0	1/1:2,14:17:36.12:774,36,0	1/1:2,28:30:87.30:1910,87,0	1/1:1,19:21:51.18:1138,51,0	1/1:1,7:8:15.05:335,15,0
chr10	26775268	.	T	TC	18103.79	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=4.430;DP=445;FS=1.006;HRun=0;HaplotypeScore=133.9282;InbreedingCoeff=0.9340;MQ=64.67;MQ0=0;MQRankSum=-6.549;QD=42.30;ReadPosRankSum=4.070;VQSLOD=4.0786;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,14:14:39.13:586,39,0	1/1:0,5:5:12.04:181,12,0	0/0:13,0:13:33.20:0,33,496	0/0:4,0:4:9.03:0,9,126	1/1:0,28:28:84.28:1253,84,0	1/1:0,18:18:51.17:764,51,0	1/1:0,6:6:18.06:271,18,0	1/1:0,25:25:72.23:1052,72,0	1/1:0,12:12:36.12:531,36,0	1/1:0,28:28:81.03:1190,81,0	1/1:0,32:32:93.31:1392,93,0	1/1:0,18:18:54.18:807,54,0	1/1:0,22:22:63.21:940,63,0	1/1:0,19:19:57.19:847,57,0	1/1:0,19:19:57.19:849,57,0	1/1:0,14:14:42.14:626,42,0	1/1:0,11:11:30.10:449,30,0	1/1:0,6:6:18.06:269,18,0	1/1:0,7:7:21.07:300,21,0	1/1:0,12:12:30.10:446,30,0	1/1:0,9:9:18.06:269,18,0	1/1:0,12:12:33.11:494,33,0	1/1:0,20:20:57.19:854,57,0	1/1:0,7:7:18.06:269,18,0	1/1:0,20:20:54.18:805,54,0	1/1:0,26:26:78.26:1149,78,0	1/1:1,28:29:78.09:1153,78,0	1/1:0,9:9:24.08:358,24,0
chr10	26775404	.	T	TCCTAAAC	44521.41	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-1.587;DP=564;FS=5.450;HRun=0;HaplotypeScore=134.5739;InbreedingCoeff=0.8890;MQ=77.66;MQ0=0;MQRankSum=-9.789;QD=85.29;ReadPosRankSum=3.289;VQSLOD=5.7831;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,1:3:6.02:210,6,0	1/1:0,13:13:33.11:1311,33,0	0/0:24,0:24:54.23:0,54,1231	0/0:18,0:18:45.05:0,45,1033	1/1:6,24:35:71.93:1971,72,0	1/1:4,26:33:72.25:2678,72,0	1/1:4,5:10:24.08:722,24,0	1/1:13,22:41:99:3249,105,0	1/1:1,16:18:48.16:1907,48,0	1/1:13,25:38:99:4127,114,0	1/1:1,21:27:57.15:1888,57,0	1/1:4,14:19:36.12:1435,36,0	1/1:3,11:17:30.10:1191,30,0	1/1:1,18:21:48.16:1875,48,0	1/1:6,11:18:36.12:1352,36,0	1/1:0,21:21:57.20:2272,57,0	1/1:0,4:6:12.04:449,12,0	1/1:2,4:7:14.88:598,15,0	1/1:5,15:20:57.18:2084,57,0	1/1:3,26:30:75.14:2551,75,0	1/1:1,2:6:9.03:268,9,0	1/1:4,17:22:51.13:1795,51,0	1/1:1,24:29:66.23:2385,66,0	1/1:6,3:9:15.05:429,15,0	1/1:0,10:12:27.09:1061,27,0	1/1:2,27:30:87.28:3306,87,0	1/1:3,26:31:69.24:2689,69,0	1/1:0,6:6:18.06:718,18,0
chr10	26776413	.	ATGTT	A	196.80	PASS	AB=1.000;AC=17;AF=0.654;AN=26;BaseQRankSum=0.796;DP=112;FS=2.738;HRun=0;HaplotypeScore=24.0563;InbreedingCoeff=0.1658;MQ=131.77;MQ0=8;MQRankSum=-2.950;QD=5.79;ReadPosRankSum=-4.793;VQSLOD=-0.0226;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:10,0:8:12.91:13,0,140	./.	0/0:27,0:21:60.20:0,60,1622	0/0:29,0:21:51.41:0,51,1367	./.	0/1:3,0:2:15.96:16,0,69	0/1:5,0:5:40.99:41,0,51	1/1:2,0:2:5.36:33,5,0	1/1:2,0:2:3:25,3,0	./.	1/1:1,0:1:3:25,3,0	./.	./.	./.	./.	./.	1/1:4,0:3:2.98:22,3,0	./.	./.	1/1:1,0:1:2.97:20,3,0	./.	./.	./.	0/0:5,0:5:3.01:0,3,58	./.	1/1:3,0:3:8.98:75,9,0	1/1:3,0:2:3.01:38,3,0	./.
chr10	26776844	.	G	GCACACACACACACACA	8496.42	PASS	AB=1.000;AC=45;AF=0.900;AN=50;BaseQRankSum=-3.497;DP=403;FS=14.981;HRun=0;HaplotypeScore=207.4946;InbreedingCoeff=0.3864;MQ=67.83;MQ0=16;MQRankSum=-1.375;QD=27.86;ReadPosRankSum=1.802;VQSLOD=2.9237;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:23:6.48:455,6,0	1/1:5,1:6:2.64:225,3,0	0/0:41,0:19:14.59:0,15,195	0/0:42,0:27:14.49:0,14,284	1/1:15,0:15:9.02:332,9,0	1/1:12,0:13:9.03:481,9,0	1/1:11,0:15:12.04:628,12,0	1/1:25,0:25:30.10:706,30,0	1/1:15,0:17:3:169,3,0	1/1:15,0:13:18.05:874,18,0	1/1:8,2:11:3.01:227,3,0	1/1:15,1:18:3.01:227,3,0	1/1:12,0:14:12.01:557,12,0	1/1:17,1:19:6.02:452,6,0	1/1:12,0:11:6.02:84,6,0	1/1:8,1:10:3.01:227,3,0	1/1:8,0:11:6.02:114,6,0	./.	1/1:3,0:2:3.01:170,3,0	0/1:15,0:15:0:0,0,0	1/1:11,0:11:15.03:726,15,0	./.	./.	1/1:9,0:8:3.01:68,3,0	1/1:20,3:24:9.03:681,9,0	1/1:9,0:9:15.05:880,15,0	1/1:3,0:3:3.01:62,3,0	1/1:3,0:3:7.27:151,7,0
chr10	26779825	.	C	CT	13779.23	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-5.451;DP=409;FS=0.000;HRun=3;HaplotypeScore=40.0333;InbreedingCoeff=0.9172;MQ=90.32;MQ0=0;MQRankSum=-8.789;QD=36.55;ReadPosRankSum=4.619;VQSLOD=4.6478;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,17:20:51.13:692,51,0	1/1:1,3:4:9.03:126,9,0	0/0:16,0:15:41.96:0,42,478	0/0:16,0:16:42.09:0,42,478	1/1:0,15:15:45.06:586,45,0	1/1:1,18:19:45.15:630,45,0	1/1:0,11:11:30.10:420,30,0	1/1:0,33:33:99:1347,99,0	1/1:0,9:9:27.09:378,27,0	1/1:6,11:17:39.13:536,39,0	1/1:1,14:15:39.13:546,39,0	1/1:0,12:12:24.08:336,24,0	1/1:0,18:18:48.16:672,48,0	1/1:4,17:21:51.17:710,51,0	1/1:1,12:13:36.12:504,36,0	1/1:2,9:11:27.09:378,27,0	1/1:0,18:18:48.16:672,48,0	1/1:0,10:10:27.09:378,27,0	1/1:1,10:11:30.10:414,30,0	1/1:2,13:15:39.13:546,39,0	1/1:1,17:18:45.15:630,45,0	1/1:0,3:3:6.02:84,6,0	1/1:2,8:10:24.08:336,24,0	1/1:0,13:13:39.13:546,39,0	1/1:1,11:12:30.10:419,30,0	1/1:2,21:23:63.21:882,63,0	1/1:1,15:16:45.15:630,45,0	1/1:1,9:10:27.09:378,27,0
chr10	26780099	.	T	TC	9576.74	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=2.262;DP=430;FS=0.000;HRun=5;HaplotypeScore=112.2866;InbreedingCoeff=0.7752;MQ=51.60;MQ0=7;MQRankSum=0.868;QD=24.37;ReadPosRankSum=1.742;VQSLOD=3.2789;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,23:27:56.80:615,57,0	1/1:0,5:5:9.03:115,9,0	0/0:23,0:7:12.02:0,12,125	0/0:14,0:5:9.02:0,9,97	1/1:3,14:17:23.99:273,24,0	1/1:7,11:18:42.04:495,42,0	1/1:3,12:15:42.01:490,42,0	1/1:6,0:7:2.84:14,3,0	1/1:4,5:9:12.04:156,12,0	1/1:4,9:13:33.05:396,33,0	1/1:2,14:15:41.88:477,42,0	1/1:1,8:9:24.01:290,24,0	1/1:3,9:12:33.09:408,33,0	1/1:1,11:12:30.10:388,30,0	1/1:6,0:23:45.96:239,46,0	1/1:3,10:13:30.10:388,30,0	1/1:7,0:26:60.52:323,61,0	1/1:3,16:18:39.13:506,39,0	1/1:7,4:10:14.99:160,15,0	1/1:7,11:18:41.96:467,42,0	1/1:1,21:22:45.01:542,45,0	1/1:1,5:6:15.05:194,15,0	1/1:4,8:12:17.92:191,18,0	1/1:0,15:15:42.14:545,42,0	1/1:4,14:18:44.87:494,45,0	1/1:8,16:24:54.15:671,54,0	1/1:3,18:20:51.17:659,51,0	1/1:0,2:2:6.02:78,6,0
chr10	26780772	.	C	CTCCAAGAGTTTCT	61494.33	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-4.959;DP=541;FS=6.810;HRun=0;HaplotypeScore=143.4883;InbreedingCoeff=0.7954;MQ=78.92;MQ0=0;MQRankSum=-9.501;QD=122.99;ReadPosRankSum=5.021;VQSLOD=4.7369;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,1:12:9.03:591,9,0	1/1:0,7:7:21.07:1381,21,0	0/0:21,0:21:51.17:0,51,1736	0/0:20,0:20:48.16:0,48,1446	1/1:7,11:25:48.16:2901,48,0	1/1:5,12:30:51.18:3304,51,0	1/1:10,6:19:42.14:2236,42,0	1/1:21,4:38:99:5281,102,0	1/1:3,9:16:36.12:2209,36,0	1/1:4,13:24:66.23:3730,66,0	1/1:4,17:30:75.21:4119,75,0	1/1:6,8:17:47.93:3060,48,0	1/1:5,5:15:30.10:1969,30,0	1/1:7,11:27:51.17:3131,51,0	1/1:6,6:22:30.10:1943,30,0	1/1:4,7:15:32.85:2141,33,0	1/1:4,5:18:18.06:1184,18,0	1/1:3,3:8:12.51:791,13,0	1/1:6,9:22:57.15:3127,57,0	1/1:7,12:26:60.16:3244,60,0	1/1:0,1:6:3.01:197,3,0	1/1:1,5:7:15.05:984,15,0	1/1:3,11:18:42.14:2653,42,0	1/1:1,6:12:15.05:846,15,0	1/1:8,10:28:54.14:3282,54,0	1/1:7,11:27:78.27:3652,78,0	1/1:6,13:29:50.97:3340,51,0	1/1:0,1:2:3.01:197,3,0
chr10	26782495	.	A	AAAAGC	30468.40	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-5.725;DP=738;FS=4.277;HRun=0;HaplotypeScore=119.8424;InbreedingCoeff=0.8980;MQ=72.32;MQ0=1;MQRankSum=-2.155;QD=44.61;ReadPosRankSum=3.542;VQSLOD=5.0045;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,35:47:84.29:2363,84,0	1/1:5,9:15:21.07:603,21,0	0/0:20,0:17:4.48:0,4,130	0/0:34,0:24:14.05:0,14,122	1/1:6,30:38:84.05:2136,84,0	1/1:10,13:25:33.11:885,33,0	1/1:6,15:21:24.08:673,24,0	1/1:14,14:31:54.13:1036,54,0	1/1:7,15:25:27.09:676,27,0	1/1:7,33:42:99:2707,105,0	1/1:7,14:22:30.04:861,30,0	1/1:5,14:19:33.11:948,33,0	1/1:8,15:23:33.04:926,33,0	1/1:7,16:23:27.09:774,27,0	1/1:5,14:22:24.08:639,24,0	1/1:8,12:19:27.09:726,27,0	1/1:5,9:14:18.06:517,18,0	1/1:5,19:24:42.14:1183,42,0	1/1:12,10:21:30.07:700,30,0	1/1:9,22:33:69.10:1656,69,0	1/1:2,15:17:36.12:1034,36,0	1/1:10,30:40:75.08:1877,75,0	1/1:7,26:35:57.19:1584,57,0	1/1:4,13:17:33.11:948,33,0	1/1:9,18:29:42.14:1204,42,0	1/1:6,25:32:78.24:2033,78,0	1/1:12,22:34:44.96:1264,45,0	1/1:0,10:10:18.06:516,18,0
chr10	26784366	.	T	TA	15149.18	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-11.561;DP=657;FS=3.379;HRun=8;HaplotypeScore=99.1599;InbreedingCoeff=0.9653;MQ=65.08;MQ0=0;MQRankSum=0.257;QD=27.25;ReadPosRankSum=4.923;VQSLOD=4.6441;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,26:32:78.04:868,78,0	1/1:2,8:10:18.05:208,18,0	0/0:15,0:16:7.49:0,7,183	0/0:10,0:10:23.23:0,23,197	1/1:6,30:36:87.19:987,87,0	1/1:4,20:24:48.14:554,48,0	1/1:7,24:31:63.19:727,63,0	0/0:35,0:35:89.35:0,89,786	1/1:2,21:23:57.17:657,57,0	1/1:3,30:33:91.14:1030,91,0	1/1:5,19:25:35.51:630,36,0	1/1:1,25:26:47.79:804,48,0	1/1:0,26:26:75.22:865,75,0	1/1:4,14:18:36.11:416,36,0	0/0:23,0:23:51.01:0,51,461	1/1:0,33:33:81.24:935,81,0	0/0:16,0:16:35.89:0,36,316	1/1:4,20:24:54.16:623,54,0	1/1:6,19:25:57.15:646,57,0	1/1:1,22:23:66.13:745,66,0	1/1:3,13:16:30.09:346,30,0	1/1:2,25:27:44.78:769,45,0	1/1:6,16:22:43.01:486,43,0	1/1:2,13:15:36.11:415,36,0	1/1:1,20:21:60.18:692,60,0	1/1:7,27:34:81.21:915,81,0	1/1:3,23:25:63.19:727,63,0	1/1:3,3:6:9.03:104,9,0
chr10	26784377	.	AAG	A	2744.64	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-4.694;DP=651;FS=3.653;HRun=0;HaplotypeScore=147.7762;InbreedingCoeff=0.9963;MQ=65.01;MQ0=0;MQRankSum=-1.581;QD=34.74;ReadPosRankSum=-0.676;VQSLOD=5.1253;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:84.26:0,84,1546	0/0:8,0:8:21.06:0,21,365	0/0:14,0:13:34.92:0,35,514	0/0:12,0:11:33.07:0,33,477	0/0:33,0:33:93.32:0,93,1736	0/0:24,0:24:63.20:0,63,1157	0/0:30,0:30:84.21:0,84,1444	1/1:0,37:37:99:1585,108,0	0/0:22,0:22:60.19:0,60,1071	0/0:35,0:34:99:0,101,1720	0/0:26,0:26:75.23:0,75,1351	0/0:29,0:29:84.29:0,84,1592	0/0:30,0:30:84.25:0,84,1508	0/0:14,0:14:39.13:0,39,740	1/1:1,23:24:26.14:752,26,0	0/0:35,0:35:93.30:0,93,1710	1/1:0,18:18:36.12:550,36,0	0/0:23,0:23:66.17:0,66,1184	0/0:25,0:25:75.21:0,75,1283	0/0:23,0:23:69.24:0,69,1306	0/0:13,0:13:33.09:0,33,574	0/0:27,0:27:81.24:0,81,1469	0/0:18,0:18:51.17:0,51,935	0/0:17,0:17:48.13:0,48,849	0/0:25,0:25:75.25:0,75,1379	0/0:28,0:28:84.27:0,84,1529	0/0:24,0:23:66.10:0,66,1235	0/0:7,0:7:21.07:0,21,380
chr10	26784888	.	GA	G	8487.49	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=0.728;DP=627;FS=3.646;HRun=7;HaplotypeScore=81.2447;InbreedingCoeff=0.9560;MQ=50.94;MQ0=52;MQRankSum=1.971;QD=16.61;ReadPosRankSum=2.881;VQSLOD=4.9337;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,40:39:39.02:384,39,0	1/1:3,15:18:45.10:458,45,0	0/0:20,0:5:5.98:0,6,50	0/0:19,0:9:11.69:0,12,105	1/1:1,29:29:54.08:539,54,0	1/1:3,25:28:48.10:489,48,0	1/1:0,21:15:26.09:250,26,0	0/0:30,0:24:60.10:0,60,738	1/1:1,17:17:26.96:275,27,0	1/1:0,20:16:45.10:459,45,0	1/1:2,21:21:39.09:397,39,0	1/1:0,21:19:23.57:231,24,0	1/1:0,18:18:30.07:306,30,0	1/1:1,13:14:27.06:275,27,0	0/0:23,0:22:33.11:0,33,415	1/1:3,26:29:47.84:489,48,0	0/0:24,0:22:30.10:0,30,377	1/1:3,18:20:39.05:386,39,0	1/1:1,17:13:39.06:385,39,0	1/1:4,17:21:41.77:427,42,0	1/1:1,18:14:30.07:306,30,0	1/1:0,25:25:47.28:487,47,0	1/1:3,23:26:42.06:428,42,0	1/1:3,18:15:18.04:183,18,0	1/1:3,19:22:27.04:275,27,0	1/1:2,21:22:57.08:569,57,0	1/1:1,21:21:36.55:368,37,0	1/1:0,8:7:12.03:122,12,0
chr10	26785231	.	T	TC	28832.59	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-6.819;DP=713;FS=2.829;HRun=2;HaplotypeScore=81.6597;InbreedingCoeff=0.9144;MQ=73.16;MQ0=0;MQRankSum=-7.402;QD=42.21;ReadPosRankSum=5.403;VQSLOD=4.1792;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,58:59:99:2206,138,0	1/1:1,11:12:30.10:479,30,0	0/0:13,0:13:34.42:0,34,364	0/0:17,0:17:21.65:0,22,306	1/1:2,23:25:60.20:945,60,0	1/1:2,18:20:45.15:707,45,0	1/1:0,18:18:48.16:766,48,0	1/1:3,29:32:90.29:1395,90,0	1/1:0,21:21:54.18:863,54,0	1/1:0,31:31:90.29:1415,90,0	1/1:0,17:17:39.13:623,39,0	1/1:0,23:23:69.24:1103,69,0	1/1:3,25:28:63.21:1005,63,0	1/1:0,32:32:90.31:1438,90,0	1/1:0,37:37:99:1727,108,0	1/1:0,24:24:66.23:1053,66,0	1/1:3,28:31:87.30:1380,87,0	1/1:0,17:17:48.16:767,48,0	1/1:2,16:18:48.16:763,48,0	1/1:1,21:22:60.20:959,60,0	1/1:1,52:53:99:2206,138,0	1/1:0,31:31:72.25:1151,72,0	1/1:1,30:31:78.26:1233,78,0	1/1:0,25:25:63.21:1007,63,0	1/1:0,22:22:66.23:1054,66,0	1/1:0,28:28:84.29:1343,84,0	1/1:0,25:25:75.26:1199,75,0	1/1:0,1:1:3.01:48,3,0
chr10	26785340	.	ATGGGGTTGGAACATCCTCGTGGAGACAGG	A	12576.92	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=8.977;DP=535;FS=13.409;HRun=0;HaplotypeScore=299.2563;InbreedingCoeff=0.7477;MQ=64.54;MQ0=3;MQRankSum=-3.739;QD=30.90;ReadPosRankSum=5.612;VQSLOD=1.4686;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:3,25:28:6.02:455,6,0	1/1:2,9:11:2.83:111,3,0	0/0:25,0:24:62.84:0,63,1593	0/0:21,0:21:56.11:0,56,1656	1/1:7,7:14:11.79:82,12,0	1/1:12,4:16:44.76:1057,45,0	1/1:15,0:15:23.94:277,24,0	0/0:30,0:30:69.14:0,69,1900	1/1:1,14:15:6.02:300,6,0	1/1:7,18:23:53.85:1031,54,0	1/1:1,13:14:6.02:144,6,0	1/1:0,16:16:2.75:227,3,0	1/1:0,11:11:5.81:455,6,0	1/1:2,26:27:24.08:1665,24,0	0/0:20,0:20:54.15:0,54,5252	1/1:7,15:22:21.06:1593,21,0	0/0:32,0:32:78.08:0,78,6289	1/1:12,0:12:17.92:138,18,0	1/1:14,7:20:32.89:361,33,0	1/1:8,9:17:20.84:344,21,0	1/1:28,0:27:39.25:352,39,0	1/1:7,13:20:14.20:305,14,0	1/1:4,6:10:6.02:280,6,0	1/1:5,13:18:3.01:228,3,0	1/1:2,20:22:12.04:910,12,0	1/1:4,17:21:45.04:1755,45,0	1/1:5,15:20:9.50:408,10,0	1/1:3,0:3:8.98:98,9,0
chr10	26785364	.	GAC	G	483.40	PASS	AB=0.945;AC=21;AF=0.389;AN=54;BaseQRankSum=9.794;DP=443;FS=30.860;HRun=0;HaplotypeScore=124.4466;InbreedingCoeff=0.1466;MQ=71.40;MQ0=1;MQRankSum=-7.006;QD=2.05;ReadPosRankSum=4.239;VQSLOD=0.7190;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:25:5.74:30,6,0	0/0:9,0:9:3.01:0,3,58	0/0:26,0:26:75.20:0,75,1337	0/0:31,0:31:93.28:0,93,1656	./.	0/1:13,0:13:12.20:12,0,369	0/0:7,0:7:9.03:0,9,154	0/0:28,0:28:75.25:0,75,1412	0/1:14,0:14:8.09:8,0,52	0/1:18,0:18:77.72:78,0,151	0/0:13,0:13:6.02:0,6,115	1/1:16,0:16:2.80:14,3,0	1/1:11,0:11:5.47:28,5,0	0/1:26,0:26:34.55:75,0,35	0/0:22,0:22:66.23:0,66,1273	1/1:17,0:17:19.89:98,20,0	0/0:29,0:29:78.27:0,78,1505	0/0:5,0:4:3.01:0,3,49	0/1:7,0:7:24.66:25,0,152	0/0:9,0:9:12.04:0,12,230	0/1:13,3:15:63.69:64,0,258	0/0:14,0:14:15.02:0,15,287	0/0:7,0:7:7.58:0,8,118	1/1:13,0:13:2.84:14,3,0	1/1:20,0:20:11.36:56,11,0	0/1:17,1:17:86.30:86,0,141	0/1:17,0:17:2.22:2,0,127	0/1:3,2:5:61.76:62,0,146
chr10	26785369	.	G	GA	1368.21	PASS	AB=0.948;AC=30;AF=0.536;AN=56;BaseQRankSum=6.159;DP=504;FS=1.205;HRun=0;HaplotypeScore=172.8039;InbreedingCoeff=-0.0121;MQ=67.27;MQ0=1;MQRankSum=-7.787;QD=3.85;ReadPosRankSum=-2.399;VQSLOD=2.8613;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:31,0:31:6.89:71,7,0	0/1:10,0:10:6.58:22,0,7	0/0:25,0:25:75.24:0,75,1021	0/0:29,0:29:87.28:0,87,1180	1/1:12,0:12:6.92:45,7,0	0/1:19,0:19:74.73:142,0,75	0/1:11,0:11:5.52:117,0,6	0/0:26,0:26:63.20:0,63,865	1/1:17,0:17:5.65:94,6,0	0/1:22,0:22:26.47:146,0,26	1/1:14,0:14:4.77:30,5,0	1/1:21,0:21:8.20:111,8,0	0/1:13,0:13:1.57:50,0,2	0/1:28,0:28:19.96:39,0,20	0/0:22,0:22:66.22:0,66,918	0/1:18,0:18:2.21:2,0,23	0/0:30,0:30:78.26:0,78,1090	0/1:3,2:4:7.96:54,0,8	0/1:8,0:8:32.89:47,0,33	1/1:10,0:10:4.85:25,5,0	0/1:20,3:22:10.12:119,0,10	1/1:16,0:16:5.48:19,5,0	0/1:8,0:8:1.73:30,0,2	0/0:17,0:17:7.46:0,7,32	0/1:21,0:21:11.95:19,0,12	0/1:22,1:22:52.90:148,0,53	1/1:20,0:20:0.09:109,0,0	0/1:3,2:5:23.91:97,0,24
chr10	26785370	.	T	TA	970.44	PASS	AB=0.980;AC=24;AF=0.429;AN=56;BaseQRankSum=4.851;DP=506;FS=18.345;HRun=0;HaplotypeScore=173.4814;InbreedingCoeff=-0.1285;MQ=69.09;MQ0=1;MQRankSum=-6.167;QD=3.02;ReadPosRankSum=4.576;VQSLOD=2.0501;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:31,0:31:28.05:65,0,28	0/1:10,0:10:2.15:19,0,2	0/0:25,0:25:75.14:0,75,1002	0/0:31,0:31:87.22:0,87,1154	1/1:12,0:12:8.76:108,9,0	0/1:18,0:18:45.04:102,0,45	0/1:6,5:11:28.92:40,0,29	0/0:25,0:25:66.20:0,66,877	0/1:17,0:17:11.12:32,0,11	0/1:22,0:22:27.86:28,0,54	1/1:14,0:14:0.33:66,0,0	0/0:21,0:21:14.25:0,14,62	0/0:13,0:13:8.54:0,9,28	0/1:28,0:28:27.06:27,0,29	0/0:22,0:22:66.20:0,66,900	0/0:18,0:18:6.95:0,7,50	0/0:30,0:30:81.24:0,81,1096	0/1:6,0:5:6.97:10,0,7	0/1:8,0:8:9.53:10,0,42	0/1:13,0:13:3.93:135,0,4	0/1:21,0:20:2.56:105,0,3	0/1:15,0:15:9.85:133,0,10	1/1:7,0:7:5.30:61,5,0	1/1:17,0:17:0.84:35,1,0	0/1:21,0:21:1.79:15,0,2	0/1:24,0:23:61.05:68,0,61	0/1:20,0:21:18.94:45,0,19	0/1:5,0:5:10.78:27,0,11
chr10	26785567	.	G	GAAC	29629.44	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-7.888;DP=619;FS=5.847;HRun=0;HaplotypeScore=65.6209;InbreedingCoeff=0.9891;MQ=60.12;MQ0=2;MQRankSum=-2.441;QD=51.71;ReadPosRankSum=5.393;VQSLOD=7.1166;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,40:44:99:2205,105,0	1/1:0,7:8:21.07:462,21,0	0/0:23,0:19:45.15:0,45,695	0/0:23,0:18:45.15:0,45,716	1/1:1,20:21:51.06:1012,51,0	1/1:0,20:20:45.15:960,45,0	1/1:4,17:21:48.16:1055,48,0	1/1:5,31:37:93.25:1918,93,0	1/1:1,19:20:51.11:1076,51,0	1/1:2,23:28:78.19:1486,78,0	1/1:2,13:14:36.04:742,36,0	1/1:3,12:15:30.10:661,30,0	1/1:2,17:20:51.18:1121,51,0	1/1:2,17:19:45.15:959,45,0	1/1:2,17:19:51.18:1121,51,0	1/1:3,13:17:36.12:792,36,0	1/1:2,29:31:78.27:1720,78,0	1/1:2,25:27:66.23:1455,66,0	1/1:1,19:20:57.17:1191,57,0	1/1:4,18:24:54.12:1137,54,0	1/1:0,26:28:63.16:1311,63,0	1/1:3,19:23:51.18:1123,51,0	1/1:3,11:14:29.77:577,30,0	1/1:1,18:19:45.15:991,45,0	1/1:0,17:17:45.15:992,45,0	1/1:2,33:36:96.33:2109,96,0	1/1:1,24:25:51.18:1124,51,0	1/1:0,5:5:15.05:331,15,0
chr10	26786711	.	A	AG	16258.71	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-7.916;DP=523;FS=0.000;HRun=4;HaplotypeScore=50.4462;InbreedingCoeff=0.9711;MQ=78.92;MQ0=0;MQRankSum=-3.466;QD=37.21;ReadPosRankSum=5.240;VQSLOD=4.2719;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,15:16:45.15:615,45,0	1/1:1,8:9:27.09:368,27,0	0/0:13,0:13:10.67:0,11,300	0/0:11,0:11:20.53:0,21,190	1/1:5,24:29:81.24:1067,81,0	1/1:2,16:18:51.15:675,51,0	1/1:1,11:12:27.09:369,27,0	0/0:38,0:38:99:0,99,1080	1/1:0,16:16:45.15:615,45,0	1/1:2,21:23:66.21:889,66,0	1/1:2,28:30:84.27:1124,84,0	1/1:1,14:15:45.15:615,45,0	1/1:1,25:26:75.25:1025,75,0	1/1:1,19:20:60.20:820,60,0	0/0:15,0:15:39.11:0,39,442	1/1:1,18:19:54.18:738,54,0	0/0:9,0:9:27.08:0,27,306	1/1:5,12:17:8.09:482,8,0	1/1:4,15:19:51.15:668,51,0	1/1:7,31:38:99:1353,102,0	1/1:0,8:8:24.08:324,24,0	1/1:3,11:14:39.13:532,39,0	1/1:4,26:30:87.25:1154,87,0	1/1:0,12:12:27.09:368,27,0	1/1:1,12:13:39.13:532,39,0	1/1:3,15:18:51.17:697,51,0	1/1:6,21:25:66.22:901,66,0	1/1:0,8:8:24.08:327,24,0
chr10	26786786	.	C	CA	12245.01	PASS	AB=0.600;AC=45;AF=0.804;AN=56;BaseQRankSum=-8.924;DP=496;FS=1.996;HRun=7;HaplotypeScore=51.9709;InbreedingCoeff=0.9120;MQ=77.87;MQ0=0;MQRankSum=-4.106;QD=30.92;ReadPosRankSum=4.375;VQSLOD=4.9257;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,12:12:36.11:435,36,0	1/1:1,10:11:30.09:362,30,0	0/0:18,0:17:38.09:0,38,354	0/0:7,0:7:17.62:0,18,151	1/1:3,22:25:66.19:786,66,0	1/1:2,18:20:54.17:652,54,0	1/1:2,13:15:36.11:435,36,0	0/0:37,0:37:96.10:0,96,909	1/1:7,9:16:33.09:387,33,0	1/1:3,31:34:93.27:1113,93,0	1/1:3,16:19:51.16:616,51,0	1/1:1,14:15:39.12:471,39,0	1/1:6,8:14:27.08:326,27,0	1/1:3,11:14:36.10:423,36,0	0/0:21,0:21:57.09:0,57,550	1/1:3,11:14:33.10:399,33,0	0/0:17,0:17:48.08:0,48,464	0/1:4,8:12:1.90:263,0,2	1/1:3,21:24:66.18:774,66,0	1/1:2,30:32:90.28:1087,90,0	1/1:2,4:6:18.04:207,18,0	1/1:1,12:13:36.07:418,36,0	1/1:1,22:23:66.20:797,66,0	1/1:1,4:5:12.04:145,12,0	1/1:3,17:20:51.16:616,51,0	1/1:1,16:17:48.15:580,48,0	1/1:4,27:31:69.16:809,69,0	1/1:0,4:4:12.04:145,12,0
chr10	26787460	.	AATACCACACAGAG	A	11679.10	PASS	AC=44;AF=0.815;AN=54;BaseQRankSum=10.481;DP=250;FS=122.686;HRun=0;HaplotypeScore=105.6220;InbreedingCoeff=0.7491;MQ=87.71;MQ0=0;MQRankSum=-11.844;QD=81.67;ReadPosRankSum=4.761;VQSLOD=1.7764;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,5:5:9.03:368,9,0	1/1:0,1:1:3.01:123,3,0	0/0:15,0:15:44.87:0,45,1662	0/0:24,0:23:63.18:0,63,2994	1/1:0,18:18:42.11:1615,42,0	1/1:2,14:16:24.03:878,24,0	1/1:0,3:3:6.02:245,6,0	0/0:34,0:34:99:0,102,5649	1/1:1,4:5:15.01:511,15,0	1/1:0,7:7:21.06:762,21,0	1/1:0,9:9:12.04:487,12,0	1/1:0,1:1:3.01:123,3,0	1/1:1,2:3:8.99:265,9,0	1/1:0,6:6:15.05:613,15,0	0/0:25,0:25:72.23:0,72,4546	1/1:0,5:5:15.05:613,15,0	0/0:9,0:9:26.98:0,27,1361	1/1:2,0:2:2.98:21,3,0	1/1:0,5:5:15.05:543,15,0	1/1:0,7:7:18.03:634,18,0	1/1:1,0:1:3:27,3,0	./.	1/1:0,6:6:12.04:491,12,0	1/1:0,1:1:3.01:123,3,0	1/1:2,9:11:24.01:797,24,0	1/1:0,12:12:33.06:1149,33,0	1/1:1,9:10:24.04:878,24,0	1/1:2,7:9:15.01:415,15,0
chr10	26787725	.	CT	C	217.17	PASS	AC=12;AF=0.462;AN=26;BaseQRankSum=0.902;DP=131;FS=5.356;HRun=2;HaplotypeScore=25.9519;InbreedingCoeff=0.5364;MQ=28.84;MQ0=53;MQRankSum=-2.014;QD=7.76;ReadPosRankSum=2.582;VQSLOD=1.1275;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:1,0:1:3.01:0,3,45	./.	1/1:18,0:1:2.92:17,3,0	./.	./.	0/0:1,0:1:3.01:0,3,45	./.	0/0:26,0:9:27.08:0,27,382	0/0:1,0:1:3.01:0,3,45	1/1:1,1:2:3.01:39,3,0	./.	./.	./.	./.	0/0:22,0:21:60.14:0,60,804	./.	0/0:11,0:9:27.09:0,27,403	1/1:0,3:3:9.03:117,9,0	./.	./.	0/0:2,0:1:3.01:0,3,45	1/1:0,2:1:3.01:39,3,0	1/1:0,2:2:6.02:78,6,0	1/1:0,1:1:3.01:39,3,0	./.	./.	./.	./.
chr10	26787769	.	TTCTCTCTCTCTCTC	T	808.75	PASS	AB=0.737;AC=5;AF=0.83;AN=6;BaseQRankSum=1.519;DP=210;FS=0.000;HRun=0;HaplotypeScore=67.1501;MQ=25.76;MQ0=33;MQRankSum=-1.302;QD=14.19;ReadPosRankSum=-1.085;VQSLOD=1.1889;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	./.	./.	./.	1/1:17,11:26:27.01:334,27,0	./.	./.	./.	./.	./.	./.	1/1:5,9:15:12.51:432,13,0	./.	0/1:9,5:13:14.40:114,0,14	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.
chr10	26790201	.	GT	G	128.62	PASS	AC=6;AF=1.00;AN=6;DP=105;FS=0.000;HRun=2;HaplotypeScore=23.2724;MQ=6.92;MQ0=98;QD=6.77;VQSLOD=0.5575;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	./.	./.	./.	1/1:2,4:4:9.03:117,9,0	./.	./.	./.	./.	./.	./.	1/1:0,1:1:3.01:39,3,0	./.	1/1:11,1:2:3.01:39,3,0	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.
chr10	26790263	.	ACC	A	730.03	PASS	AB=0.909;AC=7;AF=0.70;AN=10;BaseQRankSum=-0.286;DP=66;FS=6.232;HRun=2;HaplotypeScore=48.0824;MQ=72.41;MQ0=34;MQRankSum=-2.227;QD=20.86;ReadPosRankSum=2.227;VQSLOD=1.6364;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/1:9,1:3:21.96:22,0,29	0/0:15,0:2:0.89:0,1,2	./.	./.	./.	1/1:0,12:11:33.11:477,33,0	./.	./.	./.	./.	./.	./.	1/1:0,3:3:9.03:121,9,0	./.	1/1:5,5:6:15:185,15,0	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.
chr10	26790269	.	A	AG	495.02	PASS	AC=6;AF=0.60;AN=10;BaseQRankSum=-0.775;DP=71;FS=27.524;HRun=0;HaplotypeScore=69.1848;MQ=83.43;MQ0=20;MQRankSum=-2.075;QD=14.14;ReadPosRankSum=1.175;VQSLOD=2.3808;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:15,0:6:7.41:0,7,68	0/0:10,0:2:2.94:0,3,18	./.	./.	./.	1/1:3,18:20:50.22:417,50,0	./.	./.	./.	./.	./.	./.	1/1:1,2:4:8.22:57,8,0	./.	1/1:6,4:7:10.31:104,10,0	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.
chr10	26791658	.	C	CG	17616.43	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-10.182;DP=513;FS=5.199;HRun=0;HaplotypeScore=49.8582;InbreedingCoeff=0.9909;MQ=67.65;MQ0=1;MQRankSum=-1.337;QD=40.31;ReadPosRankSum=4.665;VQSLOD=5.1123;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,38:38:84.29:1311,84,0	1/1:0,5:5:12.04:187,12,0	0/0:7,0:7:21.07:0,21,292	0/0:18,0:18:42.19:0,42,537	1/1:0,23:23:63.15:949,63,0	1/1:1,22:23:60.20:934,60,0	1/1:0,21:21:63.21:982,63,0	0/0:24,0:23:66.19:0,66,871	1/1:0,18:18:51.17:795,51,0	1/1:2,28:30:84.26:1289,84,0	1/1:1,14:15:36.12:563,36,0	1/1:0,22:22:54.18:841,54,0	1/1:1,20:21:59.79:894,60,0	1/1:1,11:13:30.10:456,30,0	0/0:16,0:16:45.14:0,45,613	1/1:0,13:13:39.13:594,39,0	0/0:11,0:11:33.07:0,33,438	1/1:1,18:19:48.16:747,48,0	1/1:1,21:22:63.09:924,63,0	1/1:0,21:21:59.94:895,60,0	1/1:0,20:20:51.17:795,51,0	1/1:0,15:15:36.12:563,36,0	1/1:0,10:10:24.08:375,24,0	1/1:0,19:19:45.15:703,45,0	1/1:0,15:15:39.13:609,39,0	1/1:0,19:19:57.17:859,57,0	1/1:0,25:25:60.20:931,60,0	1/1:0,10:10:27.09:420,27,0
chr10	26792178	.	T	TG	21168.22	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=11.018;DP=640;FS=0.000;HRun=1;HaplotypeScore=99.5772;InbreedingCoeff=0.9989;MQ=74.65;MQ0=0;MQRankSum=-5.157;QD=40.55;ReadPosRankSum=4.996;VQSLOD=4.7368;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,36:37:99:1479,99,0	1/1:0,8:8:24.08:359,24,0	0/0:23,0:23:69.18:0,69,850	0/0:14,0:14:39.12:0,39,506	1/1:0,30:30:81.27:1213,81,0	1/1:1,24:25:63.21:944,63,0	1/1:0,23:23:66.22:987,66,0	0/0:32,0:32:93.28:0,93,1172	1/1:0,17:17:48.16:719,48,0	1/1:1,21:22:66.22:972,66,0	1/1:0,21:21:54.18:807,54,0	1/1:0,22:22:63.21:944,63,0	1/1:2,13:15:36.12:540,36,0	1/1:0,33:33:90.30:1349,90,0	0/0:20,0:20:60.18:0,60,763	1/1:1,12:13:33.11:495,33,0	0/0:29,0:29:84.25:0,84,1062	1/1:2,20:22:54.14:778,54,0	1/1:1,25:26:75.23:1081,75,0	1/1:0,27:27:66.22:970,66,0	1/1:1,24:25:60.20:898,60,0	1/1:0,23:23:66.22:988,66,0	1/1:0,21:21:60.20:899,60,0	1/1:1,13:14:36.12:539,36,0	1/1:0,27:27:75.25:1123,75,0	1/1:1,39:40:99:1737,120,0	1/1:0,23:23:66.22:989,66,0	1/1:0,8:8:24.08:359,24,0
chr10	26792630	.	C	CTGTGTT	35816.03	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-9.680;DP=734;FS=2.284;HRun=0;HaplotypeScore=118.9249;InbreedingCoeff=0.9797;MQ=45.47;MQ0=6;MQRankSum=-11.119;QD=61.02;ReadPosRankSum=2.710;VQSLOD=5.3325;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,19:24:44.98:1180,45,0	1/1:1,10:11:24:755,24,0	0/0:36,0:22:60:0,60,1020	0/0:31,0:19:51.17:0,51,1099	1/1:2,19:24:38.93:894,39,0	1/1:2,34:35:75.11:2297,75,0	1/1:3,17:19:20.78:652,21,0	0/0:26,0:26:66.21:0,66,1430	1/1:2,24:26:48.09:1517,48,0	1/1:3,24:29:72.15:2153,72,0	1/1:1,21:26:66.05:1904,66,0	1/1:0,21:22:51.13:1706,51,0	1/1:0,29:30:75.21:2549,75,0	1/1:1,27:30:66.23:2318,66,0	0/0:22,0:22:63.19:0,63,1355	1/1:0,29:32:60.17:1954,60,0	0/0:32,0:32:93.30:0,93,2011	1/1:5,10:16:20.97:492,21,0	1/1:4,13:13:39.12:1117,39,0	1/1:1,36:39:83.88:2181,84,0	1/1:2,9:11:12:336,12,0	1/1:1,22:24:50.82:1189,51,0	1/1:3,28:33:59.89:1507,60,0	1/1:2,10:13:15.05:492,15,0	1/1:1,30:32:80.93:2162,81,0	1/1:5,29:37:90.15:2516,90,0	1/1:0,45:47:99:3521,105,0	1/1:0,6:6:12.04:422,12,0
chr10	26793773	.	AT	A	2045.06	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=12.279;DP=626;FS=6.563;HRun=8;HaplotypeScore=61.9035;InbreedingCoeff=0.9801;MQ=70.74;MQ0=0;MQRankSum=1.328;QD=23.24;ReadPosRankSum=-3.051;VQSLOD=2.9272;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:72.16:0,72,842	0/0:13,0:13:36.11:0,36,435	0/0:11,0:11:18.02:0,18,192	0/0:15,0:14:15.04:0,15,170	0/0:30,0:30:84.23:0,84,992	0/0:22,1:23:34.21:0,34,696	0/0:10,0:10:27.08:0,27,326	1/1:5,40:45:86.93:1116,87,0	0/0:23,0:23:60.18:0,60,725	0/0:33,0:33:90.28:0,90,1087	0/0:16,0:16:48.15:0,48,579	0/0:19,0:19:36.11:0,36,435	0/0:18,0:19:57.04:0,57,667	0/0:26,0:26:72.22:0,72,863	1/1:2,23:25:63.10:608,63,0	0/0:29,0:29:84.25:0,84,1004	1/1:2,16:18:48.07:464,48,0	0/0:20,0:20:54.12:0,54,623	0/0:24,0:24:69.20:0,69,824	0/0:35,0:35:93.29:0,93,1123	0/0:17,0:17:48.15:0,48,580	0/0:22,0:22:66.19:0,66,786	0/0:18,0:18:51.16:0,51,616	0/0:21,1:22:34.22:0,34,696	0/0:24,0:24:72.21:0,72,861	0/0:22,0:22:54.17:0,54,652	0/0:31,0:32:90.11:0,90,1041	0/0:5,0:5:12.04:0,12,145
chr10	26794964	.	T	TGATGAAGCACTGTAATTCCAAGATCT	1272.54	PASS	AB=0.750;AC=9;AF=0.90;AN=10;BaseQRankSum=-2.620;DP=19;FS=7.160;HRun=0;HaplotypeScore=30.7676;MQ=186.04;MQ0=1;MQRankSum=0.592;QD=90.90;ReadPosRankSum=-0.761;VQSLOD=1.4325;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	1/1:2,0:4:5.76:376,6,0	0/1:4,1:6:28.98:853,0,29	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	1/1:2,0:2:2.99:23,3,0	1/1:1,0:1:3.01:68,3,0	1/1:1,0:1:3:25,3,0	./.
chr10	26796253	.	C	CAT	502.57	PASS	AB=0.867;AC=17;AF=0.304;AN=56;BaseQRankSum=2.683;DP=234;FS=10.588;HRun=0;HaplotypeScore=212.9364;InbreedingCoeff=0.0719;MQ=87.15;MQ0=0;MQRankSum=-2.114;QD=5.35;ReadPosRankSum=0.605;VQSLOD=1.9845;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:10,1:12:42.09:42,0,119	0/1:1,1:2:10.71:55,0,11	0/0:27,0:27:77.43:0,77,1112	0/0:15,0:15:29.09:0,29,503	1/1:9,0:9:9.31:26,9,0	0/0:9,0:9:19.83:0,20,178	0/0:7,0:7:12.02:0,12,124	0/1:6,0:6:39.43:51,0,39	0/0:8,0:8:15.01:0,15,133	0/1:6,0:6:21.15:21,0,36	0/0:7,0:7:7.48:0,7,72	0/0:14,0:14:28.06:0,28,253	0/1:8,2:10:57.32:57,0,77	0/0:8,0:8:11.60:0,12,99	0/0:6,0:6:11.57:0,12,99	1/1:1,1:3:3.01:59,3,0	0/0:9,0:9:19.52:0,20,169	0/0:4,1:5:8.93:0,9,73	1/1:1,1:2:2.84:61,3,0	0/1:6,2:8:40.69:66,0,41	0/1:12,2:14:51.80:52,0,52	1/1:4,0:4:2.60:10,3,0	0/1:8,0:8:0.32:0,0,45	0/0:4,0:4:2.37:0,2,33	0/0:11,0:11:20.42:0,20,178	0/1:7,3:10:99:159,0,126	0/0:8,0:8:9.28:0,9,74	0/0:2,0:2:3.01:0,3,30
chr10	26796650	.	T	TG	1135.67	PASS	AB=0.756;AC=7;AF=0.125;AN=56;BaseQRankSum=10.175;DP=532;FS=117.144;HRun=0;HaplotypeScore=70.9901;InbreedingCoeff=-0.1430;MQ=84.28;MQ0=0;MQRankSum=-9.376;QD=8.54;ReadPosRankSum=1.839;VQSLOD=0.5282;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:60.20:0,60,831	0/1:5,1:6:22.94:23,0,192	0/0:23,0:23:60.19:0,60,810	0/0:13,0:13:23.34:0,23,406	0/1:21,8:29:99:132,0,786	0/0:33,0:33:96.32:0,96,1342	0/0:15,0:15:45.15:0,45,629	0/0:46,0:46:99:0,135,1886	0/0:12,0:12:36.12:0,36,504	0/0:17,0:17:51.17:0,51,713	0/0:17,2:19:51.17:0,51,713	0/0:8,0:8:24.08:0,24,335	0/0:18,0:18:54.18:0,54,746	0/0:17,0:17:51.17:0,51,708	0/0:18,0:18:54.18:0,54,754	0/0:12,0:12:36.12:0,36,503	0/0:15,0:14:41.87:0,42,557	0/0:9,0:9:27.09:0,27,377	0/0:21,0:21:63.21:0,63,881	0/1:15,8:23:99:269,0,487	0/0:19,0:19:54.18:0,54,754	0/1:4,6:10:99:228,0,138	0/1:13,6:19:99:179,0,415	0/0:26,0:26:75.25:0,75,1048	0/1:9,10:19:99:343,0,236	0/1:23,4:27:92.97:93,0,884	0/0:25,0:25:75.25:0,75,1045	0/0:11,0:11:33.11:0,33,459
chr10	26797690	.	C	CA	1584.47	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-3.411;DP=486;FS=0.598;HRun=3;HaplotypeScore=46.1498;InbreedingCoeff=0.9698;MQ=71.48;MQ0=0;MQRankSum=-1.393;QD=31.69;ReadPosRankSum=-1.333;VQSLOD=2.8312;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:33.10:0,33,396	0/0:6,0:6:18.06:0,18,216	0/0:10,0:10:24.06:0,24,276	0/0:5,0:5:9:0,9,91	0/0:30,0:30:87.27:0,87,1040	0/0:29,0:29:84.16:0,84,965	0/0:14,0:14:42.13:0,42,503	1/1:1,19:20:54.16:720,54,0	0/0:15,0:15:45.14:0,45,539	0/0:18,0:18:51.15:0,51,604	0/0:27,0:27:81.24:0,81,958	0/0:15,0:15:39.12:0,39,464	0/0:27,0:27:78.22:0,78,913	0/0:11,0:11:33.09:0,33,386	1/1:3,13:16:33.11:462,33,0	0/0:15,0:15:45.13:0,45,528	1/1:0,14:14:39.13:545,39,0	0/0:14,0:14:39.07:0,39,450	0/0:18,0:18:51.16:0,51,612	0/0:27,0:27:69.21:0,69,827	0/0:6,0:6:15.05:0,15,180	0/0:14,0:14:42.10:0,42,489	0/0:22,0:22:66.19:0,66,779	0/0:9,0:9:27.08:0,27,324	0/0:25,0:25:72.22:0,72,863	0/0:27,0:27:72.21:0,72,854	0/0:29,0:29:87.24:0,87,1020	0/0:12,0:12:36.09:0,36,418
chr10	26798113	.	C	CAT	3210.83	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-10.751;DP=597;FS=8.766;HRun=0;HaplotypeScore=101.7050;InbreedingCoeff=0.9965;MQ=83.35;MQ0=1;MQRankSum=2.113;QD=43.98;ReadPosRankSum=-1.019;VQSLOD=4.3879;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:39.13:0,39,574	0/0:6,0:6:18.06:0,18,263	0/0:29,0:30:35:0,35,889	0/0:22,0:21:48.28:0,48,621	0/0:32,0:32:75.21:0,75,1075	0/0:24,0:24:69.22:0,69,987	0/0:18,0:18:54.17:0,54,776	1/1:2,30:33:87.26:1557,87,0	0/0:22,0:22:63.21:0,63,927	0/0:29,0:29:78.25:0,78,1111	0/0:27,0:27:69.19:0,69,991	0/0:21,0:21:54.15:0,54,766	0/0:20,0:20:57.18:0,57,819	0/0:20,0:20:57.18:0,57,821	1/1:1,22:23:63.22:1180,63,0	0/0:18,0:18:51.17:0,51,751	1/1:1,15:16:33.11:617,33,0	0/0:16,0:16:42.14:0,42,618	0/0:16,0:16:45.15:0,45,663	0/0:24,0:24:66.22:0,66,966	0/0:17,0:17:42.13:0,42,598	0/0:28,0:28:75.25:0,75,1104	0/0:20,0:20:51.17:0,51,742	0/0:9,0:9:27.09:0,27,398	0/0:24,0:24:66.19:0,66,919	0/0:23,0:23:69.19:0,69,992	0/0:27,0:27:75.23:0,75,1066	0/0:15,0:15:33.53:0,34,443
chr10	26798186	.	AG	A	17384.42	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=12.825;DP=592;FS=3.441;HRun=1;HaplotypeScore=137.5724;InbreedingCoeff=0.9971;MQ=86.06;MQ0=0;MQRankSum=-9.071;QD=36.29;ReadPosRankSum=6.800;VQSLOD=4.0685;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,21:21:54.18:701,54,0	1/1:0,6:6:18.06:234,18,0	0/0:20,0:20:60.20:0,60,926	0/0:28,0:27:81.23:0,81,1188	1/1:0,37:37:99:1265,99,0	1/1:0,31:31:93.30:1207,93,0	1/1:0,18:18:51.17:662,51,0	0/0:32,0:32:96.33:0,96,1535	1/1:0,20:20:51.17:662,51,0	1/1:1,18:19:54.15:685,54,0	1/1:0,21:21:57.19:739,57,0	1/1:0,23:23:63.20:817,63,0	1/1:0,20:20:57.19:742,57,0	1/1:0,21:21:63.20:818,63,0	0/0:20,0:20:57.18:0,57,887	1/1:0,22:22:66.21:857,66,0	0/0:13,0:13:33.11:0,33,528	1/1:0,12:12:33.11:426,33,0	1/1:0,8:8:24.08:308,24,0	1/1:0,25:25:72.11:877,72,0	1/1:0,32:32:90.29:1169,90,0	1/1:0,33:33:90.29:1168,90,0	1/1:0,10:10:30.10:389,30,0	1/1:0,12:12:27.09:351,27,0	1/1:0,29:29:81.26:1051,81,0	1/1:0,17:17:51.17:662,51,0	1/1:0,29:29:87.28:1127,87,0	1/1:0,13:13:36.12:467,36,0
chr10	26806419	.	CCAA	C	13889.46	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=5.572;DP=536;FS=12.728;HRun=0;HaplotypeScore=106.8349;InbreedingCoeff=0.9969;MQ=81.54;MQ0=0;MQRankSum=-9.255;QD=34.13;ReadPosRankSum=4.636;VQSLOD=5.0320;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,22:32:69.19:1032,69,0	1/1:0,10:10:24.08:371,24,0	0/0:30,0:30:55.23:0,55,1124	0/0:22,0:21:43.70:0,44,839	1/1:1,15:16:42.14:649,42,0	1/1:4,12:16:36.12:555,36,0	1/1:1,13:14:33.11:510,33,0	0/0:26,0:26:54.19:0,54,1151	1/1:1,23:24:66.22:1021,66,0	1/1:6,16:22:45.15:688,45,0	1/1:3,14:17:36.12:555,36,0	1/1:2,15:17:42.14:650,42,0	1/1:4,15:19:39.11:603,39,0	1/1:2,17:19:51.17:789,51,0	0/0:28,0:28:75.26:0,75,1609	1/1:7,11:18:30.10:464,30,0	0/0:23,0:23:54.19:0,54,1110	1/1:1,7:8:21.07:325,21,0	1/1:11,6:16:21.06:298,21,0	1/1:6,11:17:36.12:557,36,0	1/1:3,14:17:36.12:556,36,0	1/1:3,11:14:36.11:524,36,0	1/1:5,13:18:39.13:600,39,0	1/1:7,11:18:33.11:510,33,0	1/1:2,15:17:39.13:603,39,0	1/1:8,14:22:45.15:696,45,0	1/1:3,22:25:60.20:928,60,0	1/1:2,8:10:27.09:405,27,0
chr10	26807795	.	AT	A	1242.19	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=2.938;DP=481;FS=7.103;HRun=5;HaplotypeScore=159.4572;InbreedingCoeff=0.9900;MQ=68.63;MQ0=0;MQRankSum=-1.307;QD=25.88;ReadPosRankSum=-0.743;VQSLOD=1.5087;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:42.14:0,42,574	0/0:6,0:6:15.05:0,15,205	0/0:11,0:11:27.07:0,27,348	0/0:7,0:7:19.88:0,20,246	0/0:17,0:17:42.14:0,42,573	0/0:20,0:20:51.04:0,51,604	0/0:12,0:12:33.08:0,33,427	1/1:4,20:24:57.14:637,57,0	0/0:21,0:21:60.12:0,60,778	0/0:20,0:20:57.16:0,57,749	0/0:19,0:19:45.14:0,45,600	0/0:18,0:18:51.17:0,51,694	0/0:21,0:21:57.19:0,57,779	0/0:16,0:16:39.06:0,39,510	1/1:1,13:14:39.11:442,39,0	0/0:26,0:26:78.22:0,78,1032	1/1:0,10:10:27.08:306,27,0	0/0:27,0:27:75.18:0,75,970	0/0:14,0:14:39.13:0,39,533	0/0:20,0:20:48.03:0,48,592	0/0:14,0:14:36.09:0,36,459	0/0:22,0:22:60.20:0,60,816	0/0:20,0:20:51.17:0,51,696	0/0:12,0:12:33.10:0,33,436	0/0:16,0:16:48.16:0,48,655	0/0:20,0:20:48.15:0,48,635	0/0:23,0:23:66.22:0,66,903	0/0:14,0:14:21.07:0,21,287
chr10	26808043	.	T	TC	7733.65	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=0.093;DP=297;FS=14.262;HRun=4;HaplotypeScore=53.9710;InbreedingCoeff=0.9275;MQ=65.58;MQ0=1;MQRankSum=-1.377;QD=34.37;ReadPosRankSum=2.779;VQSLOD=4.1096;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,17:19:48.09:622,48,0	1/1:0,1:1:3.01:41,3,0	0/0:14,0:11:29.97:0,30,294	0/0:10,0:8:17.96:0,18,185	1/1:1,9:10:21.07:287,21,0	1/1:0,6:6:18.06:246,18,0	1/1:1,8:9:18.06:246,18,0	0/0:21,0:21:54.15:0,54,605	1/1:1,10:11:30.10:410,30,0	1/1:0,9:9:27.09:369,27,0	1/1:1,7:8:17.97:222,18,0	1/1:0,8:8:24.08:328,24,0	1/1:0,11:11:30.09:409,30,0	1/1:0,7:7:21:264,21,0	0/0:12,0:12:36.10:0,36,408	1/1:1,16:17:42.14:574,42,0	0/0:15,0:15:39.11:0,39,442	1/1:0,7:7:18.06:246,18,0	1/1:1,6:6:18.06:246,18,0	1/1:1,5:6:15.05:205,15,0	1/1:1,17:18:51.16:679,51,0	1/1:1,3:4:9.03:123,9,0	1/1:1,8:9:21.07:287,21,0	1/1:0,13:13:33.11:451,33,0	1/1:2,9:11:24.08:328,24,0	1/1:0,9:9:27.05:335,27,0	1/1:0,15:15:42.14:571,42,0	1/1:1,9:10:18.06:246,18,0
chr10	26809302	.	T	TA	10070.87	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-8.716;DP=470;FS=7.073;HRun=8;HaplotypeScore=131.6172;InbreedingCoeff=0.9674;MQ=76.34;MQ0=0;MQRankSum=-1.857;QD=26.93;ReadPosRankSum=2.920;VQSLOD=3.4335;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,15:17:42.12:485,42,0	1/1:0,11:11:24.07:277,24,0	0/0:13,0:13:24.06:0,24,233	0/0:9,0:8:10.96:0,11,71	1/1:9,20:29:57.04:613,57,0	1/1:4,25:29:72.21:831,72,0	1/1:1,6:7:15.04:173,15,0	0/0:6,0:40:59.93:0,60,178	1/1:2,12:14:30.09:346,30,0	1/1:0,14:14:42.12:485,42,0	1/1:2,19:21:51.15:589,51,0	1/1:1,10:11:24.07:277,24,0	1/1:4,16:20:45.13:519,45,0	1/1:2,6:8:18.05:208,18,0	0/0:0,0:20:38.70:0,39,114	1/1:0,10:10:30.09:346,30,0	0/0:0,0:14:19.68:0,20,65	1/1:2,14:16:42.12:485,42,0	1/1:2,8:10:27.05:298,27,0	1/1:6,28:34:84.18:941,84,0	1/1:1,5:6:11.99:124,12,0	1/1:4,12:17:38.82:385,39,0	1/1:2,13:15:36.11:415,36,0	1/1:1,4:5:12.04:138,12,0	1/1:1,10:11:24.07:277,24,0	1/1:4,23:27:66.18:751,66,0	1/1:4,26:30:60.18:692,60,0	1/1:0,12:12:36.11:415,36,0
chr10	26810682	.	T	TA	10051.81	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-4.130;DP=417;FS=19.489;HRun=8;HaplotypeScore=64.0264;InbreedingCoeff=0.8232;MQ=70.79;MQ0=0;MQRankSum=-4.484;QD=25.38;ReadPosRankSum=3.248;VQSLOD=3.5210;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,8:10:24.07:277,24,0	1/1:1,4:5:9.03:104,9,0	0/0:8,0:8:17.02:0,17,136	0/0:12,0:9:17.26:0,17,163	1/1:6,30:36:90.22:1020,90,0	1/1:1,15:16:45.13:519,45,0	1/1:5,7:12:24.05:264,24,0	1/1:34,0:34:83.21:455,83,0	1/1:0,9:9:27.08:311,27,0	1/1:1,21:22:63.19:727,63,0	1/1:2,25:27:69.16:781,69,0	1/1:1,8:9:21.06:242,21,0	1/1:9,11:20:18.12:382,18,0	1/1:3,9:12:27.08:312,27,0	1/1:10,0:10:25.88:136,26,0	1/1:2,19:20:57.17:658,57,0	1/1:16,0:16:31.63:166,32,0	1/1:4,12:16:27.08:312,27,0	1/1:0,13:13:39.12:450,39,0	1/1:1,19:20:60.10:659,60,0	1/1:0,1:1:3.01:35,3,0	1/1:1,7:8:21.06:238,21,0	1/1:3,9:12:27.08:308,27,0	1/1:0,3:3:9.03:104,9,0	1/1:1,8:9:24.07:277,24,0	1/1:9,18:27:54.16:621,54,0	1/1:4,21:25:51.15:589,51,0	1/1:0,3:3:9.03:104,9,0
chr10	26810690	.	A	AAC	2649.82	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=-11.069;DP=404;FS=4.101;HRun=0;HaplotypeScore=99.3247;InbreedingCoeff=0.7113;MQ=71.47;MQ0=0;MQRankSum=-2.040;QD=35.81;ReadPosRankSum=-1.922;VQSLOD=5.1958;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:8:12.44:0,12,33	0/0:8,0:8:16.34:0,16,111	0/0:10,0:9:23.99:0,24,253	0/0:8,0:8:20.03:0,20,257	0/0:32,0:32:50.42:0,50,164	0/0:18,0:18:29.26:0,29,103	0/0:9,0:9:16.78:0,17,65	1/1:1,31:33:93.27:1650,93,0	0/0:9,0:9:13.99:0,14,37	0/0:25,0:25:38.26:0,38,177	0/0:28,0:28:29.58:0,30,163	0/0:9,0:9:13.89:0,14,55	0/0:17,0:17:31.77:0,32,150	0/0:11,0:11:20:0,20,88	1/1:0,10:12:27.09:511,27,0	0/0:23,0:22:41.51:0,42,175	1/1:0,15:15:33.11:624,33,0	0/0:13,0:13:16.59:0,17,46	0/1:14,0:14:9.52:10,0,53	0/0:20,0:21:14.20:0,14,97	0/0:1,0:1:1.55:0,2,4	0/0:7,0:7:7.53:0,8,24	0/0:10,0:10:14.66:0,15,39	0/0:4,0:4:7.66:0,8,38	0/0:9,0:9:15.41:0,15,52	0/0:22,0:22:40.48:0,40,183	0/0:24,0:24:31.76:0,32,118	0/0:3,0:3:4.66:0,5,12
chr10	26811790	.	A	AACAC	37317.61	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=5.056;DP=637;FS=3.997;HRun=0;HaplotypeScore=201.0705;InbreedingCoeff=0.9863;MQ=77.22;MQ0=0;MQRankSum=-10.268;QD=63.47;ReadPosRankSum=4.196;VQSLOD=5.5500;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,10:12:27.09:718,27,0	1/1:1,14:15:39.13:1038,39,0	0/0:21,0:21:47.98:0,48,811	0/0:28,0:28:63.98:0,64,1079	1/1:5,20:25:48.16:1219,48,0	1/1:6,24:30:81.28:2096,81,0	1/1:7,12:19:30.10:777,30,0	1/1:12,38:51:99:3482,135,0	1/1:7,18:25:57.14:1425,57,0	1/1:3,22:25:72.25:1922,72,0	1/1:2,22:24:57.20:1508,57,0	1/1:6,16:22:57.20:1460,57,0	1/1:6,23:29:75.26:1978,75,0	1/1:7,19:26:69.24:1745,69,0	1/1:0,22:23:66.23:1762,66,0	1/1:3,24:27:72.25:1868,72,0	1/1:4,5:11:21.07:506,21,0	1/1:1,6:7:15.05:404,15,0	1/1:9,16:25:63.22:1620,63,0	1/1:4,25:29:75.26:1949,75,0	1/1:2,7:9:21.07:522,21,0	1/1:2,22:24:63.22:1624,63,0	1/1:7,15:22:39.13:998,39,0	1/1:2,15:17:33.11:848,33,0	1/1:6,19:25:60.21:1557,60,0	1/1:3,17:20:51.17:1327,51,0	1/1:8,28:36:84.29:2240,84,0	1/1:1,9:10:27.09:726,27,0
chr10	26814482	.	CT	C	11677.78	PASS	AB=0.955;AC=48;AF=0.857;AN=56;BaseQRankSum=10.932;DP=627;FS=7.759;HRun=9;HaplotypeScore=65.5245;InbreedingCoeff=0.7721;MQ=64.85;MQ0=1;MQRankSum=-0.421;QD=21.83;ReadPosRankSum=3.988;VQSLOD=5.5482;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,28:30:81.04:741,81,0	1/1:1,8:9:24.01:220,24,0	0/1:18,2:15:36.90:37,0,254	0/1:10,0:8:2.05:2,0,148	1/1:2,19:22:50.04:445,50,0	1/1:2,13:15:33.01:302,33,0	1/1:0,13:13:36.02:330,36,0	0/0:33,0:33:69.20:0,69,796	1/1:4,15:19:45.02:412,45,0	1/1:4,23:27:69.02:632,69,0	1/1:1,26:27:75.04:686,75,0	1/1:2,17:19:40.33:453,40,0	1/1:4,22:26:66.02:604,66,0	1/1:1,21:22:57.02:522,57,0	0/0:29,0:29:78.23:0,78,900	1/1:1,17:18:48.02:439,48,0	0/0:30,0:29:83.46:0,83,942	1/1:6,10:15:26.69:248,27,0	1/1:4,8:13:26.04:226,26,0	1/1:4,31:35:96.05:877,96,0	1/1:0,11:11:33.02:302,33,0	1/1:2,19:21:51.03:467,51,0	1/1:3,23:26:60.02:549,60,0	1/1:3,21:24:60.03:549,60,0	1/1:1,41:42:99:1043,114,0	1/1:6,21:27:63.02:576,63,0	1/1:4,28:32:78.03:714,78,0	1/1:0,11:11:33.02:302,33,0
chr10	26815161	.	CCTT	C	11822.20	PASS	AB=0.550;AC=43;AF=0.768;AN=56;BaseQRankSum=-2.924;DP=586;FS=0.498;HRun=0;HaplotypeScore=75.9997;InbreedingCoeff=0.6985;MQ=41.95;MQ0=37;MQRankSum=-8.090;QD=27.37;ReadPosRankSum=0.227;VQSLOD=4.8277;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,15:12:18.06:299,18,0	1/1:0,14:11:12.04:200,12,0	0/0:36,0:8:21.07:0,21,439	0/0:30,0:8:21.07:0,21,422	1/1:0,22:20:42.14:698,42,0	1/1:0,23:22:39.13:648,39,0	1/1:1,11:9:21.03:319,21,0	0/0:28,0:9:21.07:0,21,476	1/1:2,16:17:24.08:399,24,0	1/1:1,28:26:75.20:1191,75,0	1/1:1,13:13:21.07:349,21,0	0/1:2,21:20:5.01:559,0,5	1/1:0,16:16:39.13:634,39,0	1/1:0,23:22:42.14:697,42,0	0/0:30,0:30:75.26:0,75,1697	0/1:2,29:28:16.83:745,0,17	0/0:30,0:30:75.26:0,75,1653	0/1:4,7:10:76.61:88,0,77	1/1:6,5:6:15:195,15,0	1/1:1,24:24:35.92:598,36,0	1/1:2,5:5:12.04:200,12,0	1/1:0,22:20:33.11:548,33,0	1/1:0,16:16:21.07:349,21,0	1/1:0,11:9:18.06:299,18,0	1/1:0,22:14:27.09:449,27,0	1/1:3,22:21:57.18:913,57,0	1/1:0,31:29:72.25:1197,72,0	1/1:0,10:5:15.05:250,15,0
chr10	26815895	.	T	TA	13109.61	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-12.401;DP=508;FS=4.407;HRun=7;HaplotypeScore=52.5730;InbreedingCoeff=0.9647;MQ=79.44;MQ0=0;MQRankSum=-2.568;QD=31.14;ReadPosRankSum=4.294;VQSLOD=4.9499;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,20:22:51.16:616,51,0	1/1:0,4:4:12.04:145,12,0	0/0:14,0:14:9.34:0,9,197	0/0:10,0:10:26.99:0,27,245	1/1:0,33:33:99:1180,99,0	1/1:2,19:21:51.16:616,51,0	1/1:0,5:5:12.04:145,12,0	0/0:20,0:20:48.06:0,48,463	1/1:1,10:11:27.08:326,27,0	1/1:4,18:22:57.07:668,57,0	1/1:4,26:30:81.11:928,81,0	1/1:2,16:18:42.13:507,42,0	1/1:2,22:24:60.18:725,60,0	1/1:2,15:17:42.13:507,42,0	0/0:25,0:25:66.08:0,66,626	1/1:0,16:16:39.12:471,39,0	0/0:18,0:18:48.05:0,48,457	1/1:2,4:6:12.04:145,12,0	1/1:6,21:27:60.18:725,60,0	1/1:1,26:27:75.20:890,75,0	1/1:1,21:22:57.17:689,57,0	1/1:0,9:9:27.08:326,27,0	1/1:1,19:20:57.17:689,57,0	1/1:0,8:8:24.07:290,24,0	1/1:1,17:18:48.15:580,48,0	1/1:3,23:26:69.21:834,69,0	1/1:4,20:24:60.15:709,60,0	1/1:0,11:11:33.10:399,33,0
chr10	26816427	.	A	ACACACACAC	13195.48	PASS	AB=0.863;AC=31;AF=0.554;AN=56;BaseQRankSum=-0.104;DP=914;FS=4.282;HRun=0;HaplotypeScore=380.7311;InbreedingCoeff=-0.3847;MQ=56.64;MQ0=6;MQRankSum=-5.709;QD=16.83;ReadPosRankSum=3.698;VQSLOD=2.5957;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:28,4:31:32.78:201,0,33	1/1:6,0:11:20.54:485,21,0	0/0:38,0:25:62.82:0,63,971	0/0:52,0:37:90.63:0,91,1366	0/1:32,4:36:5.95:457,0,6	0/1:16,8:24:11.63:733,0,12	0/1:18,2:19:25.91:180,0,26	0/1:36,0:36:82.65:376,0,83	0/1:32,11:41:19.18:784,0,19	1/1:37,7:45:3.89:1397,4,0	1/1:16,6:22:16.09:351,16,0	0/1:41,6:48:49.17:776,0,49	0/1:31,3:35:12.84:788,0,13	0/1:34,4:38:44.60:669,0,45	0/0:40,0:40:81.24:0,81,997	0/1:35,11:51:68.17:933,0,68	0/1:25,0:25:5.49:5,0,814	0/1:9,1:11:99:203,0,104	1/1:15,1:13:2.01:207,2,0	0/1:29,4:34:31.74:565,0,32	1/1:55,1:53:3.58:443,4,0	0/1:23,5:28:49.36:192,0,49	0/1:25,4:29:45.55:387,0,46	0/1:23,7:32:2.58:207,0,3	0/1:22,4:27:28.20:509,0,28	0/1:27,2:30:26.17:744,0,26	0/1:29,8:36:26.15:948,0,26	1/1:10,3:13:7.38:657,7,0
chr10	26816445	.	TAC	T	1115.55	PASS	AB=0.974;AC=5;AF=0.089;AN=56;BaseQRankSum=0.188;DP=910;FS=6.315;HRun=0;HaplotypeScore=333.2539;InbreedingCoeff=0.6966;MQ=50.26;MQ0=7;MQRankSum=1.551;QD=10.62;ReadPosRankSum=-0.843;VQSLOD=2.1174;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:30:18.36:0,18,283	0/0:12,0:13:21.07:0,21,324	0/0:39,0:25:34.86:0,35,799	0/0:44,0:28:50.58:0,51,727	0/0:36,0:36:54.09:0,54,772	0/0:24,0:24:41.16:0,41,600	0/0:27,0:26:37.35:0,37,588	1/1:34,3:37:16.22:707,16,0	0/0:40,0:37:39.48:0,39,607	0/0:40,0:39:95.40:0,95,1505	0/0:26,0:26:36.10:0,36,540	0/0:47,0:46:55.50:0,55,853	0/0:38,0:37:79.39:0,79,1066	0/0:39,0:39:52.90:0,53,691	0/1:37,1:38:17.12:173,0,17	0/0:46,0:46:55.88:0,56,834	1/1:26,4:30:4.51:352,5,0	0/0:13,0:14:16.01:0,16,310	0/0:23,0:20:51.06:0,51,761	0/0:32,0:32:30.52:0,31,449	0/0:64,0:62:80.69:0,81,1212	0/0:25,0:25:19.84:0,20,253	0/0:25,0:25:25.44:0,25,385	0/0:29,0:29:27.09:0,27,431	0/0:26,0:26:29.74:0,30,465	0/0:28,0:28:65.99:0,66,839	0/0:37,0:35:66.65:0,67,881	0/0:12,0:12:28.80:0,29,375
chr10	26816447	.	C	CAT	1046.67	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=1.325;DP=917;FS=4.892;HRun=0;HaplotypeScore=335.5363;InbreedingCoeff=0.8325;MQ=50.26;MQ0=7;MQRankSum=2.286;QD=10.06;ReadPosRankSum=-0.114;VQSLOD=2.7478;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:33:21.16:0,21,259	0/0:13,0:13:23.19:0,23,211	0/0:39,0:26:50.73:0,51,829	0/0:45,0:28:67.39:0,67,842	0/0:37,0:37:56.38:0,56,700	0/0:25,0:25:49.87:0,50,488	0/0:27,0:27:39.09:0,39,546	1/1:10,27:38:46.48:885,46,0	0/0:39,0:36:42.89:0,43,478	0/0:40,0:39:87.66:0,88,1182	0/0:26,0:26:38.28:0,38,507	0/0:48,0:47:58.85:0,59,765	0/0:39,0:38:77.31:0,77,1005	0/0:39,0:40:16.42:0,16,523	1/1:38,0:38:9:165,9,0	0/0:46,0:46:53.40:0,53,566	0/1:28,0:28:2.58:120,0,3	0/0:13,0:14:31.77:0,32,300	0/0:23,0:20:53.49:0,53,680	0/0:33,0:33:38.27:0,38,425	0/0:66,0:64:75.39:0,75,1146	0/0:24,0:24:28.42:0,28,293	0/0:26,0:26:30.43:0,30,370	0/0:28,0:28:22.61:0,23,304	0/0:25,0:25:29.37:0,29,370	0/0:26,0:26:63.24:0,63,734	0/0:36,0:34:67.24:0,67,718	0/0:13,0:13:27.64:0,28,297
chr10	26816591	.	T	TCA	15927.92	PASS	AB=0.715;AC=45;AF=0.804;AN=56;BaseQRankSum=-8.415;DP=1018;FS=5.684;HRun=0;HaplotypeScore=154.5631;InbreedingCoeff=0.6115;MQ=57.55;MQ0=26;MQRankSum=3.895;QD=19.28;ReadPosRankSum=5.730;VQSLOD=4.3449;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:15,55:70:80.54:1223,81,0	1/1:2,7:9:15.05:244,15,0	0/0:52,0:12:10.68:0,11,64	0/0:80,0:15:14.84:0,15,116	1/1:9,24:34:30.10:490,30,0	1/1:5,21:25:15.35:563,15,0	0/1:13,17:30:48.39:270,0,48	0/0:26,0:24:44.90:0,45,494	1/1:12,32:44:45.15:733,45,0	1/1:7,33:40:28.72:1359,29,0	1/1:4,23:27:42.14:681,42,0	1/1:6,39:45:71.72:1094,72,0	1/1:7,24:31:50.84:766,51,0	1/1:12,35:47:59.39:1008,59,0	0/0:30,0:29:18.71:0,19,255	1/1:8,32:39:23.33:891,23,0	0/1:25,1:25:94.01:94,0,101	1/1:10,18:28:17.99:466,18,0	1/1:9,13:20:41.87:585,42,0	1/1:4,26:30:32.85:502,33,0	1/1:31,42:72:21.37:810,21,0	1/1:6,29:34:42.14:685,42,0	1/1:5,21:26:32.88:538,33,0	1/1:21,26:46:51.96:877,52,0	1/1:8,22:30:6.77:603,7,0	1/1:9,24:32:35.32:987,35,0	0/1:4,19:25:9.70:364,0,10	1/1:3,0:2:6.02:94,6,0
chr10	26816597	.	ACACACACACT	A	1290.63	PASS	AB=0.871;AC=4;AF=0.071;AN=56;BaseQRankSum=-3.491;DP=983;FS=1.681;HRun=0;HaplotypeScore=290.1431;InbreedingCoeff=0.4281;MQ=56.13;MQ0=25;MQRankSum=-4.438;QD=15.93;ReadPosRankSum=-3.555;VQSLOD=1.9323;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:72,0:71:90.25:0,90,3681	0/0:10,0:10:17.60:0,18,535	0/0:42,0:10:20.85:0,21,244	0/0:73,0:11:18:0,18,299	0/0:32,0:32:40.06:0,40,1277	0/0:25,0:24:40.38:0,40,1573	0/0:32,0:33:39.79:0,40,1039	0/1:29,0:27:99:341,0,185	0/0:40,0:40:48.64:0,49,1738	0/0:42,0:40:99:0,108,3266	0/0:26,0:26:48.16:0,48,1911	0/0:45,0:45:68.14:0,68,2694	0/0:30,0:30:48.16:0,48,1892	0/0:47,0:47:69.19:0,69,2720	1/1:18,11:28:41.94:895,42,0	0/0:40,0:39:66.70:0,67,2419	0/1:15,8:22:99:170,0,238	0/0:27,0:27:38.58:0,39,1344	0/0:19,0:17:39.59:0,40,1135	0/0:31,0:31:40.55:0,41,1549	0/0:74,0:72:79.51:0,80,2687	0/0:33,0:32:45.07:0,45,1546	0/0:24,0:24:32.85:0,33,1450	0/0:46,0:45:59.67:0,60,2343	0/0:27,0:27:41.86:0,42,1861	0/0:32,0:32:68.71:0,69,2262	0/0:28,0:28:42.14:0,42,1351	0/0:3,0:2:6.02:0,6,184
chr10	26816719	.	ACTC	A	3517.53	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=11.164;DP=728;FS=9.740;HRun=0;HaplotypeScore=101.8218;InbreedingCoeff=0.9993;MQ=83.50;MQ0=0;MQRankSum=-3.132;QD=43.43;ReadPosRankSum=-0.589;VQSLOD=5.0242;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,102,2133	0/0:10,0:10:30.10:0,30,682	0/0:32,0:33:89.71:0,90,1947	0/0:13,0:13:33.05:0,33,628	0/0:28,0:28:75.26:0,75,1685	0/0:29,0:29:84.27:0,84,1889	0/0:17,0:17:51.18:0,51,1176	1/1:1,30:31:90.25:1427,90,0	0/0:24,0:24:72.20:0,72,1611	0/0:38,0:38:99:0,108,2449	0/0:33,0:33:96.33:0,96,2164	0/0:26,0:26:75.26:0,75,1730	0/0:33,0:33:99:0,99,2201	0/0:30,0:30:90.31:0,90,2055	1/1:3,28:31:72.19:1183,72,0	0/0:29,0:29:87.28:0,87,1959	1/1:0,19:19:54.18:908,54,0	0/0:11,0:11:30.10:0,30,689	0/0:15,0:15:42.14:0,42,899	0/0:36,0:36:99:0,105,2400	0/0:37,0:36:99:0,105,2375	0/0:35,0:35:99:0,99,2249	0/0:21,0:21:57.15:0,57,1265	0/0:11,0:11:30.10:0,30,670	0/0:33,0:32:96.33:0,96,2194	0/0:22,0:22:66.23:0,66,1523	0/0:30,0:29:87.30:0,87,1969	0/0:19,0:19:57.20:0,57,1314
chr10	26817193	.	A	AG	10967.49	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-0.559;DP=514;FS=0.445;HRun=6;HaplotypeScore=88.8809;InbreedingCoeff=0.9787;MQ=76.45;MQ0=0;MQRankSum=-4.930;QD=27.77;ReadPosRankSum=4.422;VQSLOD=5.1222;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,35:38:99:1245,99,0	1/1:0,10:10:24.08:302,24,0	0/0:29,0:29:68.63:0,69,727	0/0:28,0:28:61.05:0,61,642	1/1:2,23:25:54.17:669,54,0	1/1:2,17:19:42.13:528,42,0	1/1:3,19:22:48.15:604,48,0	0/0:15,0:15:20.98:0,21,198	1/1:3,13:16:30.09:369,30,0	1/1:7,11:18:39.12:485,39,0	1/1:1,11:12:24.08:302,24,0	1/1:1,17:18:42.13:528,42,0	1/1:0,9:9:24.07:302,24,0	1/1:2,12:14:39.12:490,39,0	0/0:18,0:18:51.11:0,51,520	1/1:2,23:25:57.18:717,57,0	0/0:28,0:28:74.88:0,75,753	1/1:0,3:3:9.03:113,9,0	1/1:3,11:14:37.88:439,38,0	1/1:2,19:21:45.06:525,45,0	1/1:4,24:28:45.14:566,45,0	1/1:2,7:9:21.07:258,21,0	1/1:3,12:15:30.10:377,30,0	1/1:1,18:19:48.15:604,48,0	1/1:4,13:17:27.09:340,27,0	1/1:2,8:10:24.08:299,24,0	1/1:1,22:23:57.18:717,57,0	1/1:0,10:10:15.05:189,15,0
chr10	26817306	.	TC	T	13495.03	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=7.180;DP=468;FS=2.001;HRun=2;HaplotypeScore=67.1368;InbreedingCoeff=0.9842;MQ=68.74;MQ0=2;MQRankSum=3.118;QD=36.18;ReadPosRankSum=4.411;VQSLOD=5.4049;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,27:29:84.23:1056,84,0	1/1:0,6:6:12.04:156,12,0	0/0:15,0:11:33.10:0,33,463	0/0:10,0:7:20.96:0,21,284	1/1:0,30:30:81.26:1052,81,0	1/1:0,15:15:39.13:506,39,0	1/1:0,10:10:21.07:273,21,0	0/0:27,0:27:78.26:0,78,1169	1/1:1,6:7:21.07:272,21,0	1/1:0,31:31:93.29:1194,93,0	1/1:0,21:21:63.17:800,63,0	1/1:0,10:10:30.10:390,30,0	1/1:0,13:13:36.12:467,36,0	1/1:0,17:17:45.15:584,45,0	0/0:20,0:20:60.19:0,60,878	1/1:1,18:19:57.17:726,57,0	0/0:23,0:23:69.18:0,69,985	1/1:0,7:7:18.06:234,18,0	1/1:0,22:22:66.10:777,66,0	1/1:0,25:25:75.24:974,75,0	1/1:0,9:9:24.08:312,24,0	1/1:0,14:14:42.14:545,42,0	1/1:0,29:29:81.26:1048,81,0	1/1:2,5:7:21.06:260,21,0	1/1:0,8:8:24.08:312,24,0	1/1:0,14:14:42.14:546,42,0	1/1:0,21:21:60.20:779,60,0	1/1:1,8:8:18.06:234,18,0
chr10	26817444	.	TA	T	13252.19	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-6.041;DP=508;FS=0.000;HRun=6;HaplotypeScore=53.2496;InbreedingCoeff=0.9846;MQ=81.31;MQ0=0;MQRankSum=-6.434;QD=27.61;ReadPosRankSum=4.506;VQSLOD=4.9747;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,21:23:48.12:516,48,0	1/1:0,6:6:15.04:161,15,0	0/0:14,0:14:30.07:0,30,341	0/0:14,0:13:24.38:0,24,255	1/1:1,19:20:54.13:580,54,0	1/1:0,19:19:54.14:580,54,0	1/1:1,12:13:33.08:355,33,0	1/1:6,34:40:99:1053,99,0	1/1:1,13:14:30.07:322,30,0	1/1:1,28:29:84.21:903,84,0	1/1:0,24:24:72.18:772,72,0	1/1:0,17:17:33.08:355,33,0	1/1:1,20:21:54.14:580,54,0	1/1:2,14:16:39.10:419,39,0	1/1:1,24:25:63.16:677,63,0	1/1:2,23:25:63.16:677,63,0	1/1:1,17:18:39.10:419,39,0	1/1:1,8:9:21.05:226,21,0	1/1:0,22:22:66.14:699,66,0	1/1:0,26:26:78.20:838,78,0	1/1:0,12:12:36.09:387,36,0	1/1:2,10:12:33.07:347,33,0	1/1:3,14:17:35.98:387,36,0	1/1:0,8:8:21.05:226,21,0	1/1:0,19:19:51.13:548,51,0	1/1:1,13:14:39.10:418,39,0	1/1:2,19:21:51.13:548,51,0	1/1:2,8:10:24.06:258,24,0
chr10	26819074	.	C	CT	2906.49	PASS	AC=44;AF=0.815;AN=54;BaseQRankSum=-1.902;DP=372;FS=0.000;HRun=5;HaplotypeScore=73.2259;InbreedingCoeff=0.6924;MQ=63.31;MQ0=0;MQRankSum=-1.194;QD=9.38;ReadPosRankSum=1.220;VQSLOD=0.2446;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,17:17:3.01:39,3,0	1/1:1,8:9:2.69:39,3,0	0/0:7,0:6:20.98:0,21,205	0/0:8,0:6:18.48:0,18,172	1/1:2,17:19:13.86:163,14,0	1/1:2,16:18:8.01:65,8,0	1/1:1,7:8:5.98:59,6,0	0/0:21,0:21:49.04:0,49,466	1/1:2,20:22:6.02:79,6,0	1/1:0,8:8:21.07:274,21,0	1/1:3,10:13:0.47:1,0,0	1/1:1,11:12:10.54:102,11,0	1/1:2,5:6:5.99:60,6,0	1/1:1,10:11:6.02:79,6,0	0/0:15,0:15:32.23:0,32,315	1/1:3,16:19:20.61:227,21,0	0/0:7,0:7:21.05:0,21,225	1/1:1,2:3:2.10:73,2,0	1/1:1,9:10:27.09:355,27,0	1/1:4,20:24:18.07:188,18,0	1/1:0,6:6:6.02:79,6,0	1/1:3,15:18:11.19:99,11,0	1/1:3,25:28:11.08:156,11,0	./.	1/1:1,18:19:5.61:49,6,0	1/1:3,13:16:39.13:513,39,0	1/1:0,18:18:17.79:216,18,0	1/1:0,4:4:12.04:158,12,0
chr10	26819388	.	GT	G	17820.40	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-2.916;DP=622;FS=3.390;HRun=4;HaplotypeScore=68.6719;InbreedingCoeff=0.9909;MQ=89.78;MQ0=0;MQRankSum=-11.663;QD=31.60;ReadPosRankSum=6.369;VQSLOD=4.9047;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,17:18:48.15:576,48,0	1/1:0,10:10:27.08:324,27,0	0/0:32,0:31:81.27:0,81,1131	0/0:25,0:25:68.75:0,69,802	1/1:1,31:32:81.25:971,81,0	1/1:3,23:26:60.18:720,60,0	1/1:2,20:22:51.16:612,51,0	1/1:0,43:43:99:1522,129,0	1/1:1,22:23:54.17:648,54,0	1/1:0,20:20:57.17:684,57,0	1/1:0,12:12:30.09:359,30,0	1/1:0,24:24:69.21:828,69,0	1/1:2,27:29:66.09:792,66,0	1/1:0,19:19:54.17:647,54,0	1/1:0,22:22:60.18:720,60,0	1/1:1,22:23:60.18:720,60,0	1/1:0,13:13:39.12:468,39,0	1/1:0,6:6:18.06:216,18,0	1/1:1,21:22:63.19:754,63,0	1/1:1,33:34:96.29:1150,96,0	1/1:0,15:15:45.14:540,45,0	1/1:2,25:27:66.20:791,66,0	1/1:0,25:25:63.19:755,63,0	1/1:1,21:22:63.19:756,63,0	1/1:4,17:21:45.14:540,45,0	1/1:1,23:24:69.21:827,69,0	1/1:0,23:23:57.17:684,57,0	1/1:0,9:9:18.05:216,18,0
chr10	26820525	.	G	GA	16552.25	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-8.069;DP=531;FS=39.076;HRun=0;HaplotypeScore=58.6841;InbreedingCoeff=0.9319;MQ=66.87;MQ0=1;MQRankSum=-4.528;QD=36.06;ReadPosRankSum=6.418;VQSLOD=2.3240;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,25:25:66.15:936,66,0	1/1:0,13:13:36.12:524,36,0	0/0:18,0:18:54.17:0,54,734	0/0:25,0:24:47.03:0,47,620	1/1:0,30:30:66.17:934,66,0	1/1:1,29:30:80.63:1144,81,0	1/1:0,11:11:21.07:306,21,0	0/0:7,0:7:20.55:0,21,177	1/1:0,9:9:21.07:307,21,0	1/1:2,26:27:81.19:1080,81,0	1/1:1,16:17:47.96:645,48,0	1/1:0,19:19:48.16:700,48,0	1/1:1,21:22:57.19:822,57,0	1/1:1,16:17:39.13:569,39,0	0/0:13,0:13:5.59:0,6,31	1/1:0,19:19:45.15:656,45,0	0/0:9,0:9:6.21:0,6,37	1/1:0,21:20:45.15:656,45,0	1/1:0,14:14:42.14:613,42,0	1/1:1,18:19:44.13:577,44,0	1/1:0,11:11:30.10:439,30,0	1/1:1,13:14:33.11:479,33,0	1/1:2,21:23:63.16:889,63,0	1/1:1,29:30:69.23:1008,69,0	1/1:0,32:32:90.30:1312,90,0	1/1:0,22:22:66.20:930,66,0	1/1:1,29:29:63.17:895,63,0	1/1:0,3:3:9.03:132,9,0
chr10	26821238	.	G	GT	3080.53	PASS	AB=0.728;AC=15;AF=0.278;AN=54;BaseQRankSum=10.233;DP=507;FS=21.520;HRun=0;HaplotypeScore=70.1132;InbreedingCoeff=-0.0646;MQ=47.33;MQ0=25;MQRankSum=-7.518;QD=12.63;ReadPosRankSum=2.869;VQSLOD=2.3131;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:34,8:42:99:200,0,875	0/0:2,0:2:5.91:0,6,58	0/0:43,0:16:47.59:0,48,588	0/0:38,0:14:39.08:0,39,508	0/0:16,2:17:18.34:0,18,251	0/1:8,9:17:99:340,0,210	0/1:13,6:19:99:248,0,254	./.	0/1:5,10:15:8.85:445,0,9	0/1:11,4:14:99:149,0,377	0/1:3,4:6:99:125,0,108	0/0:13,0:12:33.07:0,33,439	0/0:18,0:17:33.11:0,33,458	0/0:11,0:10:12.04:0,12,168	1/1:7,10:11:24.57:426,25,0	0/1:12,6:18:99:236,0,388	1/1:3,4:4:3.01:48,3,0	0/1:15,8:23:99:320,0,481	0/0:15,0:12:33.11:0,33,456	0/0:14,0:13:30.10:0,30,418	0/0:35,0:34:93.31:0,93,1300	0/0:15,0:15:42.14:0,42,581	0/1:9,8:17:99:292,0,250	0/1:29,5:34:99:161,0,802	0/1:7,6:13:99:251,0,215	0/0:21,0:21:63.21:0,63,881	0/0:16,0:16:36.12:0,36,502	0/0:3,0:3:9.03:0,9,126
chr10	26821347	.	ACACCCATAAAGTAGGGAAGGATGAGGG	A	928.93	PASS	AB=0.801;AC=3;AF=0.060;AN=50;BaseQRankSum=3.770;DP=146;FS=37.714;HRun=0;HaplotypeScore=109.6168;InbreedingCoeff=-0.1202;MQ=67.46;MQ0=10;MQRankSum=-3.418;QD=46.45;ReadPosRankSum=3.718;VQSLOD=0.6643;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:7,2:9:99:406,0,2417	0/0:2,0:2:6.02:0,6,696	0/0:13,0:11:33.11:0,33,2434	0/0:12,0:10:30.10:0,30,2290	./.	0/0:3,0:3:6.02:0,6,693	0/0:3,0:3:9.03:0,9,834	0/0:10,0:9:27.09:0,27,2346	0/1:4,2:6:99:418,0,922	0/0:5,0:5:15.05:0,15,1403	0/0:3,0:2:6.02:0,6,717	0/0:1,0:1:3.01:0,3,360	./.	0/0:3,0:2:6.02:0,6,660	0/0:9,0:7:21.07:0,21,2489	0/1:4,1:5:99:202,0,1402	0/0:11,0:10:24.08:0,24,2738	0/0:1,0:1:3.01:0,3,273	0/0:4,0:4:12.04:0,12,1008	0/0:6,0:6:18.06:0,18,2077	0/0:8,0:7:18.06:0,18,1889	0/0:3,0:1:3.01:0,3,359	0/0:4,0:3:9.03:0,9,1041	0/0:5,0:5:15.05:0,15,1592	0/0:5,0:4:9.03:0,9,989	0/0:5,0:4:12.04:0,12,1342	0/0:7,0:7:20.96:0,21,2091	./.
chr10	26821928	.	A	ACC	12406.31	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-9.742;DP=477;FS=4.090;HRun=7;HaplotypeScore=55.3699;InbreedingCoeff=0.9585;MQ=83.78;MQ0=3;MQRankSum=-4.458;QD=33.71;ReadPosRankSum=5.190;VQSLOD=4.6364;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,13:17:38.44:542,38,0	1/1:1,3:4:6.02:98,6,0	0/0:23,0:23:56.29:0,56,590	0/0:12,0:13:28.63:0,29,312	1/1:4,18:22:42.14:685,42,0	1/1:2,10:12:21.07:345,21,0	1/1:2,17:19:48.16:788,48,0	0/0:38,0:38:84.20:0,84,946	1/1:2,8:10:21.07:345,21,0	1/1:5,18:23:54.07:860,54,0	1/1:1,15:16:39.13:640,39,0	1/1:4,13:17:27.09:443,27,0	1/1:7,12:19:30.10:490,30,0	1/1:1,14:15:33.11:542,33,0	0/0:17,0:17:48.13:0,48,559	1/1:1,10:11:27.09:442,27,0	0/0:18,0:18:54.16:0,54,629	1/1:2,4:6:9:119,9,0	1/1:4,12:15:36.12:577,36,0	1/1:4,23:27:63.13:957,63,0	1/1:2,8:11:26.06:363,26,0	1/1:2,9:12:20.56:303,21,0	1/1:0,14:17:38.48:554,38,0	1/1:1,15:17:42.14:688,42,0	1/1:0,16:15:33.11:541,33,0	1/1:2,10:12:27.09:423,27,0	1/1:5,31:37:75.25:1210,75,0	1/1:0,10:11:29.59:452,30,0
chr10	26822703	.	TC	T	19455.56	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=10.208;DP=704;FS=0.000;HRun=3;HaplotypeScore=70.3016;InbreedingCoeff=0.9998;MQ=89.27;MQ0=0;MQRankSum=-8.036;QD=34.31;ReadPosRankSum=5.971;VQSLOD=4.8783;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,18:18:51.16:632,51,0	1/1:0,13:13:39.04:463,39,0	0/0:27,0:27:73.04:0,73,977	0/0:25,0:25:45.75:0,46,836	1/1:0,33:33:99:1210,99,0	1/1:1,27:28:69.22:855,69,0	1/1:1,12:13:30.09:372,30,0	0/0:36,0:36:99:0,105,1457	1/1:0,25:25:66.21:818,66,0	1/1:2,20:22:60.19:743,60,0	1/1:1,25:26:72.12:856,72,0	1/1:1,30:31:90.28:1115,90,0	1/1:3,33:36:87.27:1078,87,0	1/1:0,25:25:75.24:929,75,0	0/0:33,0:33:99:0,99,1423	1/1:0,34:34:96.30:1190,96,0	0/0:16,0:16:45.13:0,45,613	1/1:0,12:12:36.11:445,36,0	1/1:1,19:20:57.18:706,57,0	1/1:0,24:24:69.18:839,69,0	1/1:1,25:26:72.23:892,72,0	1/1:1,15:16:45.14:557,45,0	1/1:0,30:30:81.25:1004,81,0	1/1:1,33:34:96.30:1190,96,0	1/1:0,21:21:57.18:706,57,0	1/1:1,31:32:95.77:1147,96,0	1/1:0,36:36:99:1263,102,0	1/1:0,12:12:36.11:446,36,0
chr10	26823734	.	T	TAAA	1809.27	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=-4.108;DP=588;FS=0.000;HRun=11;HaplotypeScore=135.6331;InbreedingCoeff=0.8245;MQ=70.59;MQ0=0;MQRankSum=-4.837;QD=24.12;ReadPosRankSum=-4.511;VQSLOD=0.8550;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:36.01:0,36,410	0/0:5,0:5:12:0,12,130	0/1:15,0:11:4.09:4,0,98	0/0:20,0:19:6.07:0,6,131	0/0:33,0:36:48.10:0,48,766	0/0:26,0:28:69:0,69,769	0/0:7,0:9:23.92:0,24,245	1/1:12,15:30:60.17:1044,60,0	0/0:15,0:16:35.98:0,36,403	0/0:22,0:23:54.05:0,54,607	0/0:19,0:19:51.10:0,51,596	0/0:20,0:21:46.54:0,47,542	0/0:23,0:26:58.53:0,59,678	0/0:19,0:20:47.99:0,48,522	1/1:8,2:20:33.11:510,33,0	0/0:11,0:12:19.52:0,20,230	1/1:0,9:10:21.07:395,21,0	0/0:6,0:7:10.55:0,11,137	0/0:25,0:25:51.04:0,51,577	0/0:26,0:28:75.06:0,75,841	0/0:22,0:26:59.76:0,60,621	0/0:21,0:23:44.87:0,45,493	0/0:24,0:27:65.89:0,66,718	0/0:19,0:20:54:0,54,587	0/0:19,0:21:57.07:0,57,638	0/0:39,0:40:85.21:0,85,1013	0/0:34,0:36:54.79:0,55,855	0/0:9,0:9:27.08:0,27,315
chr10	26824215	.	A	AAAAT	2511.57	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-10.062;DP=474;FS=7.637;HRun=0;HaplotypeScore=74.0354;InbreedingCoeff=0.9470;MQ=65.66;MQ0=0;MQRankSum=-2.464;QD=44.85;ReadPosRankSum=-3.009;VQSLOD=3.0520;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:51.15:0,51,822	0/0:12,0:12:33.08:0,33,537	0/0:4,0:4:9.02:0,9,129	0/0:8,0:8:9.92:0,10,154	0/0:19,0:19:42.14:0,42,718	0/0:20,0:20:51.16:0,51,850	0/0:7,0:7:18.06:0,18,309	1/1:6,22:31:75.19:1595,75,0	0/0:19,0:19:39.12:0,39,646	0/0:29,0:29:72.19:0,72,1160	0/0:25,0:25:66.23:0,66,1129	0/0:18,0:18:36.12:0,36,619	0/0:22,0:22:51.17:0,51,848	0/0:17,0:17:39.13:0,39,642	1/1:6,5:11:15.05:378,15,0	0/0:15,0:15:24.08:0,24,386	1/1:1,10:14:27.08:679,27,0	0/0:7,0:7:15.05:0,15,257	0/0:26,0:26:75.20:0,75,1155	0/0:22,0:22:54.18:0,54,910	0/0:10,0:10:24.08:0,24,403	0/0:11,0:11:33.11:0,33,567	0/0:18,0:18:45.15:0,45,745	0/0:10,0:10:30.09:0,30,482	0/0:25,0:25:63.21:0,63,1045	0/0:21,0:21:54.16:0,54,877	0/0:24,0:23:66.22:0,66,1110	0/0:10,0:10:30.09:0,30,489
chr10	26824388	.	AT	A	1836.10	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=6.985;DP=481;FS=0.514;HRun=5;HaplotypeScore=47.1786;InbreedingCoeff=0.9725;MQ=83.77;MQ0=0;MQRankSum=0.544;QD=26.61;ReadPosRankSum=-2.116;VQSLOD=1.9706;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:42.14:0,42,564	0/0:13,0:13:39.13:0,39,533	0/0:18,0:18:48.16:0,48,654	0/0:12,0:12:32.83:0,33,447	0/0:31,0:31:90.30:0,90,1230	0/0:18,0:18:45.10:0,45,578	0/0:17,0:17:45.14:0,45,600	1/1:3,27:30:81.19:890,81,0	0/0:17,0:17:48.15:0,48,640	0/0:22,0:22:66.22:0,66,903	0/0:33,0:33:99:0,99,1325	0/0:10,0:10:30.10:0,30,410	0/0:8,0:8:24.08:0,24,323	0/0:21,0:21:57.19:0,57,778	1/1:0,18:18:48.14:544,48,0	0/0:16,0:16:48.15:0,48,639	1/1:0,21:21:48.14:544,48,0	0/0:6,0:6:15.05:0,15,205	0/0:19,0:19:57.19:0,57,778	0/0:20,0:20:60.19:0,60,805	0/0:9,0:9:27.08:0,27,353	0/0:10,0:10:30.10:0,30,400	0/0:19,0:19:57.19:0,57,778	0/0:15,0:15:33.11:0,33,451	0/0:13,0:13:39.13:0,39,534	0/0:21,0:21:63.20:0,63,846	0/0:24,0:24:66.22:0,66,901	0/0:4,0:4:9.03:0,9,123
chr10	26824512	.	GGTGTGTGTGTGTGTGTGTTTGTGTGCGT	G	5761.69	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=0.295;DP=412;FS=15.927;HRun=0;HaplotypeScore=218.8658;InbreedingCoeff=0.5076;MQ=61.83;MQ0=9;MQRankSum=-0.880;QD=18.65;ReadPosRankSum=4.844;VQSLOD=2.5013;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:9,0:8:5.91:40,6,0	1/1:5,0:5:12.02:171,12,0	0/0:21,0:5:5.09:0,5,237	0/0:27,0:15:7.79:0,8,48	1/1:7,7:14:6.02:284,6,0	1/1:6,10:16:3.01:218,3,0	1/1:12,0:12:9.03:144,9,0	0/0:10,0:23:10.67:0,11,561	1/1:4,10:14:3.01:218,3,0	1/1:2,9:11:21.02:632,21,0	1/1:6,13:19:3.01:218,3,0	1/1:4,11:15:2.84:141,3,0	1/1:6,0:6:2.98:21,3,0	1/1:7,0:17:9.03:535,9,0	0/0:9,0:14:29.70:0,30,2004	1/1:3,7:10:5.81:233,6,0	0/0:6,0:18:9.87:0,10,504	1/1:7,0:7:10.96:69,11,0	1/1:11,9:18:27.02:688,27,0	1/1:5,15:21:15.01:411,15,0	1/1:10,0:10:2.99:24,3,0	1/1:0,10:10:3.01:91,3,0	1/1:5,12:17:3.48:215,3,0	1/1:3,15:18:3.01:218,3,0	1/1:5,1:13:6.02:257,6,0	1/1:15,0:15:21.03:291,21,0	1/1:4,16:20:1.04:214,1,0	1/1:9,0:9:27.04:429,27,0
chr10	26824530	.	TTTGTGTGC	T	2818.46	PASS	AB=1.000;AC=48;AF=0.857;AN=56;BaseQRankSum=1.805;DP=325;FS=9.805;HRun=0;HaplotypeScore=97.6372;InbreedingCoeff=0.2602;MQ=54.10;MQ0=14;MQRankSum=-0.561;QD=10.36;ReadPosRankSum=0.987;VQSLOD=1.4867;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:8,0:7:5.55:57,6,0	1/1:5,0:4:12.02:171,12,0	0/0:21,0:5:5.09:0,5,102	0/0:16,0:6:7.91:0,8,53	1/1:8,0:8:6.02:92,6,0	1/1:10,0:10:3.01:59,3,0	1/1:8,0:8:9.03:144,9,0	0/1:24,0:24:51.79:52,0,257	1/1:10,0:10:3.01:59,3,0	1/1:10,0:9:21.06:298,21,0	1/1:14,0:14:3.01:59,3,0	1/1:11,0:11:2.80:36,3,0	1/1:3,0:3:2.98:21,3,0	1/1:12,0:12:9.03:152,9,0	0/0:16,0:16:11.88:0,12,335	1/1:7,0:7:6.02:73,6,0	0/1:19,0:19:59.08:130,0,59	1/1:5,0:5:11.93:105,12,0	1/1:11,0:9:27.02:355,27,0	1/1:16,0:16:12.04:144,12,0	1/1:8,0:6:2.99:24,3,0	1/1:10,0:10:3.01:35,3,0	1/1:15,0:13:3.01:56,3,0	1/1:15,0:15:3.01:59,3,0	1/1:8,0:8:3.90:37,4,0	1/1:0,9:9:21.01:291,21,0	1/1:16,0:16:3.95:61,4,0	1/1:10,0:10:30.01:388,30,0
chr10	26824538	.	CGT	C	337.65	PASS	AB=0.920;AC=27;AF=0.711;AN=38;BaseQRankSum=2.298;DP=331;FS=1.654;HRun=0;HaplotypeScore=91.2802;InbreedingCoeff=0.1201;MQ=53.23;MQ0=18;MQRankSum=-0.805;QD=1.53;ReadPosRankSum=1.709;VQSLOD=1.8577;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:12,1:11:5.91:48,6,0	./.	./.	./.	1/1:7,0:8:2.84:14,3,0	0/1:11,0:11:8.18:8,0,16	./.	0/1:24,0:24:33.18:42,0,33	1/1:10,0:10:2.84:14,3,0	1/1:11,0:9:3.31:15,3,0	1/1:15,0:15:2.84:14,3,0	0/1:12,0:12:0:0,0,0	./.	1/1:12,0:12:5.64:27,6,0	0/1:6,11:18:44.73:126,0,45	./.	1/1:17,1:19:11.30:81,11,0	0/0:5,0:5:5.11:0,5,26	1/1:12,0:10:3.73:16,4,0	./.	0/1:9,0:6:0:0,0,0	./.	1/1:15,0:13:2.68:11,3,0	1/1:15,0:15:2.84:14,3,0	0/0:8,0:8:2.94:0,3,18	./.	1/1:17,0:17:2.14:13,2,0	0/0:9,0:9:0:0,0,0
chr10	26825552	.	AT	A	22035.08	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=0.765;DP=770;FS=4.166;HRun=5;HaplotypeScore=77.9885;InbreedingCoeff=0.9988;MQ=90.47;MQ0=0;MQRankSum=-11.534;QD=31.04;ReadPosRankSum=6.607;VQSLOD=4.8782;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,38:39:99:1157,102,0	1/1:0,9:9:27.08:306,27,0	0/0:35,0:35:99:0,99,1291	0/0:25,0:25:45.39:0,45,711	1/1:1,23:24:69.20:783,69,0	1/1:0,23:23:69.20:783,69,0	1/1:3,20:23:54.15:613,54,0	1/1:3,31:34:93.22:1027,93,0	1/1:2,23:25:69.19:783,69,0	1/1:0,25:25:75.18:829,75,0	1/1:0,27:27:78.22:884,78,0	1/1:1,33:34:96.27:1089,96,0	1/1:1,24:25:63.18:715,63,0	1/1:2,33:35:96.27:1089,96,0	1/1:4,41:44:99:1327,117,0	1/1:0,35:35:99:1157,102,0	1/1:3,16:19:35.45:467,35,0	1/1:0,9:9:27.04:291,27,0	1/1:0,20:20:60.16:671,60,0	1/1:1,36:37:99:1123,99,0	1/1:1,47:48:99:1531,135,0	1/1:1,18:19:48.14:544,48,0	1/1:1,19:20:57.16:647,57,0	1/1:2,23:25:66.19:749,66,0	1/1:0,24:24:69.20:783,69,0	1/1:2,29:31:87.25:986,87,0	1/1:3,38:41:99:1225,108,0	1/1:0,14:14:42.12:476,42,0
chr10	26825882	.	A	AT	15692.56	PASS	AC=54;AF=0.964;AN=56;BaseQRankSum=-3.002;DP=524;FS=2.053;HRun=6;HaplotypeScore=43.6928;InbreedingCoeff=0.7087;MQ=71.70;MQ0=0;MQRankSum=-0.079;QD=30.47;ReadPosRankSum=1.301;VQSLOD=5.2665;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,9:11:21.07:264,21,0	1/1:0,7:7:20.98:243,21,0	1/1:7,0:6:2.04:6,2,0	0/0:9,0:9:8.86:0,9,70	1/1:3,30:33:87.15:1041,87,0	1/1:3,15:18:39.12:491,39,0	1/1:0,8:8:21.07:264,21,0	1/1:4,33:37:99:1218,99,0	1/1:0,14:14:39.12:491,39,0	1/1:4,20:24:63.12:714,63,0	1/1:3,27:30:78.11:939,78,0	1/1:3,20:23:51.16:636,51,0	1/1:0,23:23:66.21:828,66,0	1/1:3,12:15:36.11:445,36,0	1/1:0,14:14:39.12:491,39,0	1/1:0,14:14:33.11:415,33,0	1/1:3,23:26:60.19:755,60,0	1/1:3,9:12:3.51:244,4,0	1/1:2,12:14:36.11:441,36,0	1/1:1,22:23:66.07:774,66,0	1/1:1,13:14:36.12:453,36,0	1/1:1,13:14:35.86:390,36,0	1/1:3,18:21:48.63:605,49,0	1/1:0,17:17:45.14:566,45,0	1/1:3,22:25:57.18:717,57,0	1/1:2,26:28:78.25:981,78,0	1/1:3,28:31:72.23:906,72,0	1/1:2,10:12:30.10:377,30,0
chr10	26827374	.	TTA	T	2483.50	PASS	AB=1.000;AC=48;AF=0.923;AN=52;BaseQRankSum=-3.219;DP=242;FS=0.000;HRun=0;HaplotypeScore=47.2003;InbreedingCoeff=0.1994;MQ=84.20;MQ0=3;MQRankSum=-1.942;QD=10.75;ReadPosRankSum=3.510;VQSLOD=2.8947;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,0:8:3.16:10,3,0	1/1:5,0:5:5:45,5,0	0/0:8,0:6:5.34:0,5,22	0/1:17,0:10:11.46:11,0,13	1/1:9,0:9:3.31:10,3,0	1/1:8,0:8:11.50:47,11,0	1/1:4,0:4:4.44:13,4,0	1/1:6,35:41:99:1321,105,0	1/1:6,0:6:6.66:20,7,0	1/1:5,0:5:4.92:47,5,0	1/1:7,0:7:11.10:33,11,0	1/1:4,0:5:10.26:77,10,0	1/1:6,0:6:6.41:19,6,0	0/1:4,0:5:6.31:6,0,11	1/1:1,4:5:9.03:116,9,0	1/1:4,0:4:2.22:7,2,0	1/1:2,18:19:39.13:502,39,0	1/1:10,0:10:4.12:12,4,0	1/1:8,0:8:18.79:118,19,0	1/1:7,0:7:4.26:12,4,0	1/1:6,0:6:1.80:17,2,0	./.	1/1:3,0:3:2.22:7,2,0	./.	1/1:5,0:5:4.59:14,5,0	1/1:7,0:7:9.84:75,10,0	1/1:13,0:13:12.24:37,12,0	1/1:16,0:16:6.07:18,6,0
chr10	26827383	.	T	TAC	3855.77	PASS	AB=1.000;AC=43;AF=0.827;AN=52;BaseQRankSum=-7.243;DP=228;FS=2.174;HRun=0;HaplotypeScore=41.4001;InbreedingCoeff=0.5561;MQ=80.82;MQ0=3;MQRankSum=-1.350;QD=21.54;ReadPosRankSum=2.640;VQSLOD=3.8308;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,8:8:9.03:172,9,0	1/1:3,1:4:7.36:75,7,0	0/0:7,0:4:5.58:0,6,43	0/0:20,0:10:13.14:0,13,63	1/1:0,7:7:9.03:166,9,0	1/1:0,8:8:15.05:282,15,0	1/1:0,2:2:6.02:116,6,0	0/1:41,0:41:53.17:53,0,417	1/1:0,5:5:9.03:173,9,0	1/1:0,5:5:11.76:144,12,0	1/1:1,8:9:15.05:288,15,0	1/1:3,1:4:11.81:132,12,0	1/1:0,8:9:12.04:230,12,0	1/1:1,4:5:12.04:204,12,0	0/0:4,0:4:8.63:0,9,46	1/1:1,5:6:3.01:58,3,0	0/0:18,0:17:37.10:0,37,192	1/1:2,6:9:6.02:115,6,0	1/1:2,7:9:12.58:282,13,0	1/1:0,6:6:6.02:115,6,0	1/1:1,6:7:15.04:256,15,0	./.	1/1:0,2:2:3.01:58,3,0	./.	1/1:0,5:5:6.02:115,6,0	1/1:3,3:6:13.93:185,14,0	1/1:0,13:13:24.08:460,24,0	1/1:0,8:9:9.03:173,9,0
chr10	26827592	.	C	CT	6317.42	PASS	AB=1.000;AC=51;AF=0.911;AN=56;BaseQRankSum=-0.633;DP=450;FS=0.000;HRun=9;HaplotypeScore=75.2999;InbreedingCoeff=0.6779;MQ=66.42;MQ0=5;MQRankSum=-3.711;QD=15.41;ReadPosRankSum=1.228;VQSLOD=5.0702;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:15,22:39:91.54:697,92,0	1/1:2,0:2:2.94:18,3,0	0/0:24,0:13:17.88:0,18,204	0/0:16,0:11:5.02:0,5,110	1/1:6,2:8:11.85:89,12,0	1/1:15,3:17:25.25:178,25,0	1/1:6,11:16:36.12:328,36,0	1/1:13,20:31:43.10:683,43,0	1/1:3,13:15:38.15:316,38,0	1/1:4,5:9:27:240,27,0	1/1:5,2:7:8.92:62,9,0	1/1:6,6:12:20.22:166,20,0	1/1:7,7:14:26.87:222,27,0	1/1:7,10:17:29.87:241,30,0	1/1:4,21:25:15.80:384,16,0	1/1:10,7:17:20.99:181,21,0	1/1:3,32:34:53.78:594,54,0	1/1:5,7:13:26.93:229,27,0	1/1:11,7:18:27.58:397,28,0	1/1:10,4:13:26.53:191,27,0	1/1:10,4:14:24.60:186,25,0	1/1:2,2:3:2.99:24,3,0	0/1:6,0:5:0:0,0,0	1/1:9,14:24:42.13:343,42,0	1/1:8,5:11:20.34:138,20,0	1/1:2,3:5:11.86:90,12,0	1/1:11,9:18:35.42:256,35,0	1/1:6,1:7:8.86:64,9,0
chr10	26827601	.	T	TTC	9921.41	PASS	AB=0.831;AC=45;AF=0.804;AN=56;BaseQRankSum=-4.237;DP=454;FS=5.052;HRun=0;HaplotypeScore=68.5358;InbreedingCoeff=0.4811;MQ=62.51;MQ0=6;MQRankSum=-2.836;QD=25.18;ReadPosRankSum=0.485;VQSLOD=5.5093;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:41,5:45:80.96:1514,81,0	1/1:0,1:1:3.01:55,3,0	0/0:21,0:10:27.13:0,27,312	0/0:15,0:10:7.97:0,8,185	0/1:6,1:7:3.49:125,0,3	1/1:13,5:18:27.07:418,27,0	1/1:15,2:17:34.56:680,35,0	0/1:26,0:24:57.01:57,0,146	1/1:19,0:18:39.12:629,39,0	1/1:6,3:10:27.09:441,27,0	1/1:2,1:8:11.96:177,12,0	1/1:14,1:15:23.97:361,24,0	1/1:8,4:15:27.08:445,27,0	1/1:14,1:15:30.10:514,30,0	0/0:24,0:24:6.27:0,6,101	1/1:9,6:15:20.84:361,21,0	0/1:35,0:34:3.69:4,0,77	1/1:10,2:12:32.56:508,33,0	1/1:19,1:20:33.67:697,34,0	1/1:9,3:12:29.95:411,30,0	1/1:5,5:12:24.07:401,24,0	1/1:2,2:4:3.01:51,3,0	0/1:0,4:4:0:0,0,0	1/1:15,7:27:45.54:743,46,0	1/1:10,3:11:21.07:352,21,0	1/1:7,1:6:15.02:230,15,0	1/1:14,3:21:35.73:598,36,0	0/1:5,2:7:6.17:149,0,6
chr10	26827602	.	C	CCT	8577.40	PASS	AB=0.805;AC=43;AF=0.768;AN=56;BaseQRankSum=-2.189;DP=456;FS=5.927;HRun=0;HaplotypeScore=75.2978;InbreedingCoeff=0.7150;MQ=62.26;MQ0=6;MQRankSum=-3.509;QD=25.45;ReadPosRankSum=1.059;VQSLOD=5.2407;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,31:45:69.12:1204,69,0	1/1:1,0:1:2.99:23,3,0	0/0:21,0:10:19.44:0,19,256	0/0:15,0:10:11.12:0,11,156	0/1:5,2:7:4.02:135,0,4	1/1:7,9:18:22.04:299,22,0	1/1:5,14:18:42.07:647,42,0	0/0:23,0:22:12.13:0,12,360	1/1:0,16:18:39.13:661,39,0	1/1:6,5:11:28.57:335,29,0	1/1:4,2:6:12.02:163,12,0	1/1:3,10:16:16.08:338,16,0	1/1:7,7:15:26.98:424,27,0	1/1:1,14:17:30.08:484,30,0	0/0:24,0:24:38.19:0,38,329	1/1:8,6:15:27.03:387,27,0	0/0:34,0:34:19.50:0,19,334	1/1:5,7:12:33.03:501,33,0	1/1:8,7:20:25.54:516,26,0	1/1:4,4:11:23.91:302,24,0	1/1:7,5:12:21.71:270,22,0	1/1:4,2:5:3.01:51,3,0	0/1:4,0:3:0:0,0,0	1/1:12,14:27:45.54:677,46,0	1/1:3,7:11:21.02:285,21,0	1/1:5,4:8:17.99:233,18,0	1/1:14,9:21:45.01:568,45,0	0/1:3,2:7:8.19:74,0,8
chr10	26827848	.	C	CA	9474.50	PASS	AC=52;AF=1.000;AN=52;BaseQRankSum=-5.963;DP=307;FS=1.275;HRun=0;HaplotypeScore=361.2416;InbreedingCoeff=-0.0396;MQ=30.96;MQ0=0;MQRankSum=-0.813;QD=30.86;ReadPosRankSum=1.106;VQSLOD=2.8918;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,16:19:14.52:243,15,0	1/1:0,8:8:20.36:323,20,0	./.	./.	1/1:0,15:15:33.54:476,34,0	1/1:1,14:15:34.78:533,35,0	1/1:1,4:5:14.83:182,15,0	1/1:0,4:3:12.04:187,12,0	1/1:0,15:15:37.86:534,38,0	1/1:1,12:13:29.85:401,30,0	1/1:0,5:5:13.29:194,13,0	1/1:0,11:11:4.18:205,4,0	1/1:0,13:13:36.10:534,36,0	1/1:0,16:16:26.94:562,27,0	1/1:0,11:11:26.11:396,26,0	1/1:0,20:20:25.09:547,25,0	1/1:0,13:13:33.06:422,33,0	1/1:1,3:4:2.03:60,2,0	1/1:1,3:4:4.30:93,4,0	1/1:0,10:10:27.93:366,28,0	1/1:0,3:3:3.48:49,3,0	1/1:0,22:20:43.90:703,44,0	1/1:0,17:17:37.96:548,38,0	1/1:1,8:9:6.17:88,6,0	1/1:0,15:15:16.76:320,17,0	1/1:0,17:16:40.65:668,41,0	1/1:0,20:20:52.80:787,53,0	1/1:0,3:3:3.06:54,3,0
chr10	26827854	.	CCAT	C	5583.06	PASS	AB=0.554;AC=48;AF=0.923;AN=52;BaseQRankSum=-1.371;DP=259;FS=1.958;HRun=0;HaplotypeScore=360.0532;InbreedingCoeff=0.0081;MQ=30.07;MQ0=0;MQRankSum=-0.932;QD=21.56;ReadPosRankSum=1.201;VQSLOD=3.9794;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,11:13:5.40:82,5,0	1/1:0,6:6:18.01:205,18,0	./.	./.	1/1:1,13:14:17.73:201,18,0	1/1:0,10:10:26.10:285,26,0	1/1:0,4:4:11.97:131,12,0	1/1:0,2:2:3.01:36,3,0	1/1:0,15:15:38.28:428,38,0	1/1:0,12:12:31.24:293,31,0	0/1:1,3:4:12.99:82,0,13	1/1:0,10:10:5.17:141,5,0	1/1:1,11:12:32.89:362,33,0	1/1:1,13:14:12.31:323,12,0	1/1:0,10:10:19.87:256,20,0	1/1:1,18:19:30.02:407,30,0	0/1:2,8:10:4.96:103,0,5	1/1:0,3:3:3.02:50,3,0	1/1:0,4:4:7.59:118,8,0	1/1:0,9:9:20.78:245,21,0	1/1:0,3:3:1.68:36,2,0	0/1:3,13:15:11.20:274,0,11	1/1:1,13:14:25.06:360,25,0	0/1:1,6:7:1.36:1,0,11	1/1:0,13:13:5.08:170,5,0	1/1:0,13:12:33.88:375,34,0	1/1:1,19:20:35.32:583,35,0	1/1:0,2:2:5.88:36,6,0
chr10	26827902	.	G	GA	1422.02	PASS	AB=0.969;AC=47;AF=0.870;AN=54;BaseQRankSum=-7.475;DP=390;FS=20.646;HRun=0;HaplotypeScore=296.7784;InbreedingCoeff=0.1859;MQ=44.92;MQ0=1;MQRankSum=0.291;QD=3.84;ReadPosRankSum=-2.982;VQSLOD=1.8896;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:22,2:24:5.39:55,5,0	1/1:6,0:6:8.38:44,8,0	./.	0/0:5,0:2:5.34:0,5,28	0/1:15,0:15:0.49:29,0,0	1/1:14,0:14:4.38:34,4,0	1/1:13,2:15:19.93:109,20,0	1/1:24,0:23:45.20:187,45,0	1/1:16,1:17:6.60:51,7,0	1/1:17,0:17:18.99:90,19,0	1/1:10,0:10:15.41:80,15,0	0/1:16,1:17:0.79:38,0,1	1/1:16,1:17:8.31:57,8,0	1/1:12,0:12:1.08:62,1,0	1/1:16,1:17:7.46:49,7,0	0/1:25,1:26:11.96:52,0,12	1/1:16,0:16:11.46:42,11,0	1/1:3,0:3:2.72:13,3,0	1/1:12,0:10:18.79:78,19,0	1/1:18,0:17:8.91:42,9,0	1/1:4,0:4:5.88:36,6,0	1/1:17,2:17:16:117,16,0	0/0:10,0:9:3.38:0,3,8	1/1:12,1:13:2.84:25,3,0	1/1:11,1:12:6.36:39,6,0	1/1:16,0:16:16.60:137,17,0	1/1:20,0:20:2.40:24,2,0	1/1:6,0:6:3.52:39,4,0
chr10	26827923	.	T	TGAAAGAGACAGA	4206.81	PASS	AB=1.000;AC=49;AF=0.875;AN=56;BaseQRankSum=2.086;DP=532;FS=3.148;HRun=0;HaplotypeScore=285.7033;InbreedingCoeff=0.1998;MQ=60.59;MQ0=1;MQRankSum=-3.747;QD=8.93;ReadPosRankSum=2.470;VQSLOD=1.5975;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:24:3.45:21,3,0	1/1:7,0:7:1.55:17,2,0	0/0:24,0:15:3.53:0,4,620	0/0:37,0:24:5.76:0,6,440	1/1:16,0:16:7.32:46,7,0	1/1:18,0:18:11.53:73,12,0	1/1:23,0:23:16.91:108,17,0	0/1:45,0:41:99:753,0,106	1/1:19,0:19:14.88:127,15,0	1/1:23,0:23:30.68:237,31,0	1/1:12,0:12:11.80:87,12,0	1/1:23,0:23:22.90:151,23,0	1/1:21,0:21:17.80:115,18,0	1/1:16,0:16:25.61:169,26,0	1/1:18,0:18:18.06:958,18,0	1/1:29,0:29:17.26:113,17,0	1/1:6,7:18:3.01:160,3,0	1/1:4,0:4:4.01:23,4,0	0/1:13,0:12:48.14:75,0,48	1/1:19,0:19:11.92:85,12,0	1/1:5,0:5:2.94:18,3,0	1/1:23,0:22:26.01:173,26,0	1/1:10,0:9:5.35:29,5,0	1/1:17,0:17:13.48:91,13,0	1/1:16,0:16:10.96:69,11,0	1/1:22,0:22:7.56:256,8,0	1/1:22,0:22:22.28:164,22,0	0/1:8,0:8:19.06:89,0,19
chr10	26827926	.	A	AAGAGAG	14049.33	PASS	AB=0.923;AC=50;AF=0.893;AN=56;BaseQRankSum=-4.332;DP=608;FS=5.561;HRun=0;HaplotypeScore=211.2294;InbreedingCoeff=0.3699;MQ=62.18;MQ0=3;MQRankSum=-3.256;QD=26.02;ReadPosRankSum=3.789;VQSLOD=4.2443;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,17:26:3.01:105,3,0	1/1:3,6:11:6.28:119,6,0	0/0:28,0:17:33.97:0,34,707	0/0:40,0:25:4.31:0,4,592	1/1:5,11:20:9.03:265,9,0	1/1:2,17:22:15.92:433,16,0	1/1:2,20:25:15.05:509,15,0	0/1:47,0:43:99:126,0,250	1/1:6,17:23:14.54:379,15,0	1/1:4,18:28:55.23:1525,55,0	1/1:2,10:14:12.04:368,12,0	1/1:7,17:26:30.02:924,30,0	1/1:2,19:23:12.50:607,12,0	1/1:0,19:22:27.09:909,27,0	1/1:2,0:25:18.06:375,18,0	1/1:6,26:33:19.53:618,20,0	1/1:16,0:17:3.01:61,3,0	1/1:3,1:4:8.92:184,9,0	1/1:1,12:16:45.05:883,45,0	1/1:2,18:24:12.04:418,12,0	1/1:4,2:6:3.01:56,3,0	1/1:1,22:25:27.09:876,27,0	1/1:1,8:8:6.02:195,6,0	1/1:6,12:18:14.52:459,15,0	1/1:4,13:18:14.72:414,15,0	1/1:1,21:23:66.18:1800,66,0	1/1:2,19:22:31.07:945,31,0	0/1:9,2:11:9.13:496,0,9
chr10	26829677	.	T	TACTC	4212.51	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=0.625;DP=455;FS=0.533;HRun=0;HaplotypeScore=72.1455;InbreedingCoeff=0.9933;MQ=78.28;MQ0=0;MQRankSum=-6.469;QD=69.06;ReadPosRankSum=-2.178;VQSLOD=6.3701;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:27.09:0,27,539	0/0:6,0:6:18.06:0,18,359	0/0:14,0:14:39.11:0,39,672	0/0:9,0:9:24.05:0,24,398	0/0:20,0:20:60.20:0,60,1157	0/0:31,0:31:93.32:0,93,1857	0/0:12,0:12:36.12:0,36,719	1/1:5,18:26:72.23:1761,72,0	0/0:17,0:17:48.16:0,48,947	0/0:21,0:21:60.14:0,60,1123	0/0:20,0:20:60.18:0,60,1129	0/0:14,0:14:36.09:0,36,680	0/0:18,0:18:54.17:0,54,1011	0/0:16,0:16:45.14:0,45,861	1/1:1,17:18:39.13:1070,39,0	0/0:20,0:20:57.20:0,57,1138	1/1:2,15:17:51.18:1381,51,0	0/0:14,0:14:42.14:0,42,807	0/0:16,0:16:42.14:0,42,806	0/0:12,0:12:36.12:0,36,695	0/0:7,0:7:21.07:0,21,419	0/0:8,0:8:24.08:0,24,437	0/0:16,0:16:48.16:0,48,959	0/0:13,0:13:39.13:0,39,779	0/0:21,0:21:57.20:0,57,1138	0/0:23,0:23:66.22:0,66,1260	0/0:26,0:26:75.22:0,75,1425	0/0:10,0:10:27.09:0,27,539
chr10	26829850	.	TGCGC	T	951.86	PASS	AC=6;AF=0.111;AN=54;BaseQRankSum=4.739;DP=397;FS=0.000;HRun=0;HaplotypeScore=118.3917;InbreedingCoeff=0.7008;MQ=64.93;MQ0=17;MQRankSum=-0.320;QD=25.73;ReadPosRankSum=-0.156;VQSLOD=3.4220;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:33.11:0,33,471	1/1:3,0:3:0.99:3,1,0	0/0:25,0:12:29.65:0,30,392	0/0:23,0:11:17.64:0,18,282	0/0:18,0:18:11.99:0,12,145	0/0:22,0:22:34.63:0,35,466	0/0:13,0:13:21.07:0,21,307	1/1:1,21:22:63.21:977,63,0	0/0:8,0:8:11.63:0,12,159	0/0:13,0:12:23.51:0,24,297	0/0:18,0:18:17.80:0,18,258	0/0:8,0:8:7.49:0,7,135	0/0:9,0:9:8.41:0,8,160	0/0:7,0:7:14.47:0,14,151	./.	0/0:11,0:11:14.34:0,14,160	1/1:12,0:12:6.02:85,6,0	0/0:14,0:14:10.79:0,11,327	0/0:9,0:9:18.02:0,18,222	0/0:15,0:15:25.51:0,26,339	0/0:15,0:15:39.10:0,39,513	0/0:11,0:11:5.99:0,6,91	0/0:14,0:12:21.06:0,21,302	0/0:17,0:16:17.91:0,18,276	0/0:18,0:18:24.06:0,24,323	0/0:17,0:17:35.08:0,35,505	0/0:15,0:15:32.86:0,33,416	0/0:5,0:5:5.24:0,5,22
chr10	26829851	.	GCGCGCACACACACACACACACACACACA	G	950.95	PASS	AC=4;AF=0.074;AN=54;BaseQRankSum=3.018;DP=403;FS=1.716;HRun=0;HaplotypeScore=242.7469;InbreedingCoeff=0.7429;MQ=63.89;MQ0=17;MQRankSum=1.272;QD=28.82;ReadPosRankSum=-0.985;VQSLOD=2.5967;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:33.11:0,33,1157	0/0:3,0:3:3.48:0,3,216	0/0:24,0:11:29.65:0,30,419	0/0:23,0:11:29.98:0,30,763	0/0:22,0:22:11.62:0,12,462	0/0:22,0:22:36.05:0,36,1384	0/0:15,0:15:21.07:0,21,449	1/1:21,0:21:63.21:977,63,0	0/0:9,0:9:10.30:0,10,396	0/0:13,0:12:33.08:0,33,1753	0/0:19,0:19:17.78:0,18,594	0/0:10,0:10:12.47:0,12,562	0/0:8,0:8:21.03:0,21,734	0/0:8,0:8:14.98:0,15,560	./.	0/0:11,0:11:15.04:0,15,566	1/1:12,0:12:6.02:85,6,0	0/0:13,0:13:16.93:0,17,1681	0/0:8,0:8:18.06:0,18,855	0/0:15,0:15:27.46:0,27,797	0/0:15,0:15:39.10:0,39,782	0/0:10,0:10:6.01:0,6,528	0/0:14,0:12:21.53:0,22,325	0/0:17,0:16:17.95:0,18,782	0/0:19,0:19:24.55:0,25,722	0/0:18,0:18:54.18:0,54,2861	0/0:13,0:13:36.11:0,36,1467	0/0:5,0:5:15.05:0,15,957
chr10	26829855	.	GCACACACA	G	1931.94	PASS	AB=0.699;AC=36;AF=0.857;AN=42;BaseQRankSum=1.436;DP=398;FS=0.000;HRun=0;HaplotypeScore=130.4300;InbreedingCoeff=0.2929;MQ=56.61;MQ0=18;MQRankSum=-0.842;QD=7.58;ReadPosRankSum=1.337;VQSLOD=2.0880;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	1/1:0,4:4:2.63:74,3,0	./.	./.	1/1:8,13:24:0.40:0,0,0	1/1:11,11:23:6.96:132,7,0	0/0:10,5:16:0.47:0,0,1	./.	1/1:3,4:7:0.47:1,0,0	1/1:8,5:12:15.01:264,15,0	0/1:8,9:20:0:0,0,0	1/1:3,5:10:2.83:56,3,0	1/1:4,3:7:6.02:149,6,0	1/1:3,4:7:3.01:75,3,0	./.	1/1:4,8:12:2.88:75,3,0	./.	1/1:10,3:13:6.01:149,6,0	./.	1/1:9,4:14:3.01:75,3,0	1/1:16,0:16:6.02:149,6,0	1/1:4,5:9:0.40:1,0,0	0/0:8,1:11:0.47:0,0,1	0/1:12,5:16:0:0,0,0	1/1:6,9:18:2.75:39,3,0	1/1:12,10:21:19.25:363,19,0	1/1:8,6:14:6.02:125,6,0	1/1:0,4:5:12.04:280,12,0
chr10	26830238	.	A	AG	3693.85	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-10.030;DP=689;FS=11.188;HRun=1;HaplotypeScore=111.5930;InbreedingCoeff=0.9941;MQ=71.62;MQ0=0;MQRankSum=0.344;QD=37.69;ReadPosRankSum=-0.630;VQSLOD=2.1496;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,126,1589	0/0:5,0:5:15.05:0,15,195	0/0:22,0:22:60.18:0,60,746	0/0:28,0:29:67.52:0,68,822	0/0:30,0:30:75.24:0,75,949	0/0:23,0:23:69.22:0,69,886	0/0:10,0:10:30.10:0,30,389	1/1:2,38:40:99:1581,111,0	0/0:30,0:30:87.27:0,87,1114	0/0:28,0:28:81.24:0,81,1034	0/0:14,0:14:42.14:0,42,545	0/0:36,0:36:99:0,108,1363	0/0:33,0:33:99:0,99,1267	0/0:29,0:29:84.25:0,84,1053	1/1:3,34:37:84.28:1258,84,0	0/0:23,0:23:66.19:0,66,830	1/1:2,19:21:57.19:854,57,0	0/0:11,0:11:33.11:0,33,427	0/0:32,0:32:90.25:0,90,1135	0/0:21,0:21:60.15:0,60,759	0/0:27,0:27:69.18:0,69,871	0/0:16,0:16:48.16:0,48,623	0/0:14,0:14:42.07:0,42,524	0/0:22,0:22:63.19:0,63,797	0/0:17,0:17:48.12:0,48,580	0/0:27,0:27:81.26:0,81,1051	0/0:30,0:30:90.29:0,90,1160	0/0:18,0:18:51.17:0,51,659
chr10	26830304	.	G	GT	15724.81	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=9.745;DP=672;FS=15.350;HRun=1;HaplotypeScore=148.8765;InbreedingCoeff=0.9994;MQ=76.56;MQ0=0;MQRankSum=-8.166;QD=29.61;ReadPosRankSum=4.292;VQSLOD=3.1302;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:26,15:41:99:1088,110,0	1/1:8,0:8:23.10:254,23,0	0/0:24,0:24:63.12:0,63,811	0/0:26,0:26:66.07:0,66,851	1/1:14,9:23:50.30:497,50,0	1/1:23,10:33:98.03:1037,98,0	1/1:11,6:17:50.54:533,51,0	0/0:23,0:23:69.20:0,69,914	1/1:20,6:26:77.56:823,78,0	1/1:13,11:24:71.98:796,72,0	1/1:11,9:20:50.06:536,50,0	1/1:21,9:30:88.63:886,89,0	1/1:15,7:22:65.29:609,65,0	1/1:16,8:24:67.33:627,67,0	0/0:43,0:43:99:0,114,1541	1/1:20,5:25:71.56:761,72,0	0/0:25,0:25:75.23:0,75,1030	1/1:13,3:16:47.97:520,48,0	1/1:14,11:24:72.06:855,72,0	1/1:13,5:18:53.57:527,54,0	1/1:21,11:32:77.68:832,78,0	1/1:15,4:19:56.34:591,56,0	1/1:15,5:20:59.19:611,59,0	1/1:14,6:20:44.74:471,45,0	1/1:13,5:18:50.76:567,51,0	1/1:19,10:29:86.91:972,87,0	1/1:17,5:22:66.02:738,66,0	1/1:16,3:19:56.84:593,57,0
chr10	26830306	.	AT	A	10859.59	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=12.044;DP=675;FS=8.758;HRun=2;HaplotypeScore=166.0236;InbreedingCoeff=0.9984;MQ=76.58;MQ0=0;MQRankSum=-6.073;QD=20.30;ReadPosRankSum=4.095;VQSLOD=4.1883;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:26,14:40:94.61:684,95,0	1/1:8,0:8:18.99:182,19,0	0/0:25,0:25:58.62:0,59,961	0/0:26,0:26:66.07:0,66,865	1/1:14,8:22:44.57:341,45,0	1/1:26,7:33:89.70:699,90,0	1/1:11,5:16:39.77:303,40,0	0/0:21,0:21:60.20:0,60,899	1/1:22,5:27:76.15:597,76,0	1/1:12,11:23:64.32:527,64,0	1/1:13,7:20:37.05:270,37,0	1/1:20,10:30:75.33:580,75,0	1/1:16,7:23:59.52:432,60,0	1/1:16,8:24:55.77:407,56,0	0/0:43,0:43:99:0,114,1686	1/1:21,6:27:73.61:613,74,0	0/0:25,0:25:69.18:0,69,969	1/1:13,3:16:46.64:373,47,0	1/1:14,10:23:67.73:581,68,0	1/1:14,5:19:52.70:404,53,0	1/1:23,11:34:79.13:669,79,0	1/1:15,4:19:51.30:406,51,0	1/1:16,5:21:53.22:416,53,0	1/1:14,6:20:41.28:333,41,0	1/1:14,4:18:48.13:397,48,0	1/1:19,10:29:83.81:709,84,0	1/1:18,3:21:58.70:468,59,0	1/1:18,3:21:60.54:468,61,0
chr10	26830803	.	A	AAC	7803.24	PASS	AB=0.755;AC=43;AF=0.768;AN=56;BaseQRankSum=0.372;DP=488;FS=0.892;HRun=0;HaplotypeScore=145.7654;InbreedingCoeff=0.0045;MQ=55.03;MQ0=8;MQRankSum=-0.998;QD=17.86;ReadPosRankSum=0.659;VQSLOD=4.6407;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:21,14:35:42.09:646,42,0	1/1:5,4:10:18.05:254,18,0	0/0:26,0:11:2.98:0,3,22	0/0:25,0:11:5.78:0,6,83	0/1:10,14:26:8.22:697,0,8	0/1:12,6:18:29.26:423,0,29	1/1:5,6:11:21.07:318,21,0	1/1:32,0:31:11.81:104,12,0	1/1:8,9:17:27.09:416,27,0	1/1:15,4:20:7.40:258,7,0	1/1:6,4:10:15.05:231,15,0	1/1:14,12:26:14.75:528,15,0	0/1:13,6:19:13.09:256,0,13	0/1:10,4:14:41.32:270,0,41	1/1:12,0:14:9:78,9,0	0/1:5,6:11:7.12:300,0,7	1/1:12,0:21:14.93:118,15,0	1/1:5,10:15:33.08:483,33,0	0/1:6,3:8:16.18:160,0,16	0/1:11,2:13:19.17:126,0,19	0/1:29,7:36:1.09:399,0,1	1/1:4,6:10:15.05:231,15,0	1/1:7,5:12:21.07:321,21,0	1/1:7,2:9:6.02:92,6,0	1/1:6,5:11:21.05:297,21,0	0/1:14,5:19:35.45:325,0,35	1/1:14,3:17:30.08:425,30,0	1/1:0,1:1:3.01:46,3,0
chr10	26830840	.	A	AGT	8635.05	PASS	AB=0.714;AC=40;AF=0.741;AN=54;BaseQRankSum=-0.812;DP=547;FS=0.000;HRun=0;HaplotypeScore=113.7740;InbreedingCoeff=0.1830;MQ=52.55;MQ0=24;MQRankSum=0.784;QD=21.32;ReadPosRankSum=3.279;VQSLOD=5.3981;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:18,11:29:14.76:364,0,15	0/1:5,5:10:16.63:191,0,17	./.	0/0:53,0:6:3.01:0,3,33	1/1:18,11:29:25.71:623,26,0	1/1:12,8:20:24.08:370,24,0	1/1:6,12:18:36.09:534,36,0	0/0:22,0:23:38.82:0,39,422	1/1:11,11:23:1.51:478,2,0	1/1:6,5:12:21.07:308,21,0	1/1:4,6:9:21.07:306,21,0	0/1:17,7:24:4.57:365,0,5	1/1:12,5:17:13.77:423,14,0	1/1:9,14:23:22.53:771,23,0	1/1:7,0:15:28.45:267,28,0	1/1:7,9:17:25.64:377,26,0	0/0:19,0:19:27.04:0,27,297	1/1:6,6:13:18.06:277,18,0	1/1:12,6:15:18.06:280,18,0	1/1:7,7:14:21.07:326,21,0	0/1:13,8:21:13.57:259,0,14	0/1:7,1:8:25.60:82,0,26	0/1:9,5:14:15.95:215,0,16	1/1:2,4:6:3.01:47,3,0	0/1:7,11:18:0.68:411,0,1	1/1:7,11:18:33.11:508,33,0	1/1:14,7:21:45.15:683,45,0	0/1:2,4:5:19.58:171,0,20
chr10	26830949	.	TTGTTC	T	19565.60	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=4.469;DP=395;FS=1.566;HRun=0;HaplotypeScore=91.6567;InbreedingCoeff=0.8276;MQ=86.70;MQ0=0;MQRankSum=-9.044;QD=54.20;ReadPosRankSum=4.972;VQSLOD=5.1703;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,15:17:45.15:1002,45,0	1/1:0,2:2:3.01:67,3,0	0/0:22,0:22:59.76:0,60,1662	0/0:12,0:12:27.56:0,28,730	1/1:0,17:17:45.12:841,45,0	1/1:0,23:23:57.20:1270,57,0	1/1:2,7:9:18.02:354,18,0	1/1:1,22:22:63.17:1239,63,0	1/1:0,16:16:39.13:869,39,0	1/1:1,19:20:57.17:1211,57,0	1/1:0,20:20:60.12:1206,60,0	1/1:0,18:18:51.18:1136,51,0	1/1:1,10:11:27.09:601,27,0	1/1:0,11:11:30.10:668,30,0	1/1:0,11:11:27.09:601,27,0	1/1:1,12:13:27.09:577,27,0	1/1:2,1:3:9.03:168,9,0	1/1:0,11:11:21.07:468,21,0	1/1:2,9:11:24.08:526,24,0	1/1:0,25:25:75.12:1583,75,0	1/1:3,9:12:20.85:456,21,0	1/1:0,13:13:33.07:661,33,0	1/1:1,11:12:30.10:642,30,0	1/1:0,4:4:6.02:134,6,0	1/1:1,17:18:48.16:1016,48,0	1/1:2,16:18:48.06:933,48,0	1/1:1,16:17:48.16:1069,48,0	1/1:1,5:6:12.04:267,12,0
chr10	26831787	.	A	ATT	14422.78	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=5.897;DP=617;FS=8.766;HRun=8;HaplotypeScore=99.7384;InbreedingCoeff=0.9880;MQ=75.89;MQ0=3;MQRankSum=-4.794;QD=25.89;ReadPosRankSum=2.794;VQSLOD=3.8620;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:23:63.14:655,63,0	1/1:14,0:14:36.07:360,36,0	0/0:16,0:17:29.31:0,29,383	0/0:16,0:17:33.53:0,34,360	1/1:34,0:34:96.15:950,96,0	1/1:26,0:26:72.12:698,72,0	1/1:19,0:19:45.06:429,45,0	1/1:7,18:26:59.69:899,60,0	1/1:23,0:23:63.11:611,63,0	1/1:30,0:30:83.93:713,84,0	1/1:22,0:22:54.05:526,54,0	1/1:28,0:28:75.14:750,75,0	1/1:18,0:18:45.09:461,45,0	1/1:27,0:27:63.11:614,63,0	0/0:26,0:26:72.19:0,72,803	1/1:23,0:23:54.09:536,54,0	1/1:1,17:18:45.15:714,45,0	1/1:7,0:7:21.04:209,21,0	1/1:19,0:19:51.02:466,51,0	1/1:27,0:27:71.99:667,72,0	1/1:20,0:20:48.08:468,48,0	1/1:26,0:26:72.12:701,72,0	1/1:22,0:20:57.10:573,57,0	1/1:10,0:10:27.05:262,27,0	1/1:33,0:32:69.11:669,69,0	1/1:25,0:25:72.02:645,72,0	1/1:30,0:30:75.09:723,75,0	1/1:7,0:7:12.50:123,12,0
chr10	26834173	.	AC	A	18947.56	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=5.803;DP=595;FS=0.394;HRun=1;HaplotypeScore=66.3424;InbreedingCoeff=0.9963;MQ=71.91;MQ0=0;MQRankSum=-0.891;QD=38.99;ReadPosRankSum=4.891;VQSLOD=5.2564;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,20:21:39.95:792,40,0	1/1:0,6:6:15.05:210,15,0	0/0:18,0:17:51.16:0,51,773	0/0:17,0:17:41.94:0,42,552	1/1:0,18:18:54.18:749,54,0	1/1:0,31:31:87.29:1216,87,0	1/1:0,15:15:42.14:587,42,0	0/0:33,0:33:96.30:0,96,1469	1/1:0,23:23:66.22:923,66,0	1/1:0,29:29:84.26:1145,84,0	1/1:0,17:17:48.16:671,48,0	1/1:0,21:21:63.21:881,63,0	1/1:0,27:27:78.26:1091,78,0	1/1:0,23:23:54.18:755,54,0	0/0:19,0:19:57.19:0,57,911	1/1:0,19:19:54.18:755,54,0	0/0:22,0:22:66.09:0,66,1021	1/1:1,19:20:54.16:736,54,0	1/1:0,18:18:54.17:740,54,0	1/1:0,27:27:75.08:980,75,0	1/1:0,14:14:39.13:545,39,0	1/1:0,25:25:66.15:899,66,0	1/1:0,19:19:54.18:755,54,0	1/1:0,28:28:75.25:1048,75,0	1/1:0,20:20:57.19:797,57,0	1/1:0,28:28:84.24:1124,84,0	1/1:0,24:24:72.24:1006,72,0	1/1:0,13:13:39.13:545,39,0
chr10	26836338	.	G	GAAACCATA	38195.33	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-7.274;DP=598;FS=0.811;HRun=0;HaplotypeScore=134.9764;InbreedingCoeff=0.9408;MQ=68.16;MQ0=0;MQRankSum=-7.267;QD=69.57;ReadPosRankSum=4.363;VQSLOD=4.7315;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,11:25:36.12:1474,36,0	1/1:4,6:11:18.06:766,18,0	0/0:26,0:25:35.92:0,36,863	0/0:23,0:22:31.56:0,32,549	1/1:7,18:25:48.16:1896,48,0	1/1:12,15:29:39.13:1661,39,0	1/1:6,9:15:31.04:941,31,0	1/1:28,5:36:48.15:1754,48,0	1/1:4,16:21:51.18:2172,51,0	1/1:13,10:26:51.17:2008,51,0	1/1:11,7:19:30.06:1010,30,0	1/1:4,17:22:54.19:2299,54,0	1/1:6,10:16:36.12:1513,36,0	1/1:8,9:17:36.12:1530,36,0	1/1:12,11:25:45.15:1861,45,0	1/1:10,14:25:54.19:2279,54,0	1/1:7,9:16:27.09:1118,27,0	1/1:11,4:16:15.05:560,15,0	1/1:22,5:28:33.11:1253,33,0	1/1:9,14:24:48.12:1851,48,0	1/1:9,3:14:9.03:383,9,0	1/1:9,14:24:48.64:1993,49,0	1/1:9,6:15:24.08:908,24,0	1/1:4,8:12:24.08:903,24,0	1/1:9,11:21:27.09:1150,27,0	1/1:12,9:22:39.11:1533,39,0	1/1:12,23:36:69.24:2867,69,0	1/1:3,4:7:12.04:512,12,0
chr10	26837072	.	G	GAAC	30550.55	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-11.597;DP=638;FS=11.482;HRun=0;HaplotypeScore=78.9195;InbreedingCoeff=0.9918;MQ=87.97;MQ0=0;MQRankSum=-9.040;QD=58.86;ReadPosRankSum=4.850;VQSLOD=6.5904;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,25:27:69.24:1564,69,0	1/1:1,9:10:30.10:666,30,0	0/0:27,0:27:69.23:0,69,1120	0/0:24,0:24:66.19:0,66,1039	1/1:2,26:30:72.25:1568,72,0	1/1:0,26:26:78.27:1766,78,0	1/1:1,17:18:42.14:937,42,0	0/0:39,0:39:99:0,108,1778	1/1:3,23:27:72.25:1577,72,0	1/1:3,28:32:93.29:2022,93,0	1/1:0,19:21:60.21:1342,60,0	1/1:1,22:24:63.17:1357,63,0	1/1:3,29:32:86.88:1913,87,0	1/1:4,23:28:72.25:1529,72,0	0/0:18,0:18:54.18:0,54,900	1/1:1,24:25:63.22:1388,63,0	0/0:11,0:11:33.11:0,33,549	1/1:0,4:4:12.04:272,12,0	1/1:7,16:23:69.24:1525,69,0	1/1:1,15:16:45.11:910,45,0	1/1:5,22:29:69.24:1518,69,0	1/1:1,14:15:39.13:883,39,0	1/1:2,24:26:69.24:1562,69,0	1/1:4,7:12:24.47:448,24,0	1/1:1,22:23:69.24:1532,69,0	1/1:3,22:25:69.24:1531,69,0	1/1:2,34:36:99:2195,99,0	1/1:0,10:10:24.08:544,24,0
chr10	26837943	.	A	AG	965.95	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-4.294;DP=493;FS=10.285;HRun=8;HaplotypeScore=61.6819;InbreedingCoeff=0.9672;MQ=66.42;MQ0=2;MQRankSum=-3.197;QD=17.89;ReadPosRankSum=-1.446;VQSLOD=2.3135;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:68.46:0,68,597	0/0:10,0:10:21:0,21,192	0/0:23,0:18:38.85:0,39,341	0/0:20,0:14:17.90:0,18,152	0/0:18,0:18:48.02:0,48,436	0/0:26,0:26:50.73:0,51,461	0/0:15,0:15:39.01:0,39,356	1/1:10,7:17:24.07:276,24,0	0/0:12,0:12:27:0,27,247	0/0:9,0:9:21:0,21,192	0/0:17,0:17:32.95:0,33,288	0/0:15,0:15:26.97:0,27,241	0/0:17,0:17:41.97:0,42,373	0/0:23,0:24:65.03:0,65,572	1/1:0,17:17:30.09:346,30,0	0/0:23,0:23:60.01:0,60,547	1/1:3,17:20:43.01:486,43,0	0/0:5,0:5:8.71:0,9,82	0/0:13,0:13:20.91:0,21,176	0/0:22,0:23:46.72:0,47,416	0/0:27,0:27:72.02:0,72,655	0/0:23,0:23:60.02:0,60,546	0/0:12,0:12:26.97:0,27,239	0/0:9,0:9:21:0,21,192	0/0:14,0:14:42.02:0,42,382	0/0:21,0:21:38.03:0,38,335	0/0:20,0:20:45.01:0,45,410	0/0:13,0:13:27:0,27,247
chr10	26839135	.	CA	C	1647.45	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.259;DP=555;FS=3.821;HRun=8;HaplotypeScore=52.6172;InbreedingCoeff=0.9954;MQ=86.25;MQ0=0;MQRankSum=-0.764;QD=21.68;ReadPosRankSum=-2.148;VQSLOD=3.1077;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:54.15:0,54,641	0/0:9,0:9:24.06:0,24,279	0/0:18,0:18:51.08:0,51,566	0/0:18,0:18:45.13:0,45,528	0/0:26,0:26:69.20:0,69,823	0/0:34,0:34:99:0,99,1184	0/0:15,0:15:45.14:0,45,544	1/1:4,28:32:84.12:805,84,0	0/0:11,0:11:24.07:0,24,290	0/0:28,0:28:75.23:0,75,906	0/0:16,0:16:39.11:0,39,460	0/0:26,0:26:72.19:0,72,833	0/0:25,0:25:69.19:0,69,813	0/0:18,0:18:39.12:0,39,471	1/1:3,25:28:66.10:637,66,0	0/0:15,0:15:42.13:0,42,507	1/1:2,14:16:36.05:348,36,0	0/0:8,0:8:18.06:0,18,217	0/0:18,0:18:48.11:0,48,555	0/0:19,0:19:45.13:0,45,530	0/0:13,0:13:36.10:0,36,424	0/0:17,0:17:39.11:0,39,461	0/0:26,0:26:78.24:0,78,940	0/0:18,0:18:42.12:0,42,496	0/0:14,0:14:39.11:0,39,460	0/0:28,0:28:84.26:0,84,1015	0/0:25,0:25:72.22:0,72,870	0/0:14,0:14:42.13:0,42,507
chr10	26839576	.	ATGTG	A	1245.32	PASS	AB=1.000;AC=25;AF=0.781;AN=32;BaseQRankSum=-2.707;DP=154;FS=0.000;HRun=0;HaplotypeScore=50.0513;InbreedingCoeff=0.3091;MQ=29.60;MQ0=8;MQRankSum=-0.217;QD=13.25;ReadPosRankSum=0.487;VQSLOD=2.4937;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,0:6:2.60:7,3,0	./.	1/1:11,0:1:2.98:21,3,0	0/0:18,0:2:2.88:0,3,15	0/0:1,0:1:0:0,0,0	./.	1/1:1,0:1:3.01:50,3,0	1/1:13,12:25:35.88:435,36,0	./.	1/1:6,0:6:18.03:253,18,0	./.	0/1:3,0:3:0:0,0,0	./.	./.	1/1:1,3:4:0.19:0,0,0	./.	1/1:4,9:13:18.06:299,18,0	0/1:5,0:5:11.99:16,0,12	1/1:5,0:3:3.01:43,3,0	./.	1/1:2,0:2:0.89:2,1,0	./.	0/1:3,0:3:0:0,0,0	./.	./.	1/1:4,0:4:9.03:125,9,0	1/1:6,0:6:6.02:82,6,0	./.
chr10	26839583	.	TGTG	T	1298.41	PASS	AB=0.720;AC=35;AF=0.673;AN=52;BaseQRankSum=2.324;DP=213;FS=18.376;HRun=0;HaplotypeScore=58.0032;InbreedingCoeff=0.2660;MQ=34.60;MQ0=12;MQRankSum=-4.468;QD=9.91;ReadPosRankSum=-2.631;VQSLOD=0.7403;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,3:8:4.76:84,5,0	./.	0/0:13,0:1:2.37:0,2,8	0/0:26,0:4:8.82:0,9,88	1/1:2,1:3:2.72:20,3,0	1/1:1,4:5:14.85:102,15,0	0/1:5,1:6:21.25:40,0,21	0/0:24,0:24:15.54:0,16,400	1/1:2,0:2:5.93:40,6,0	1/1:6,5:11:0.87:145,1,0	1/1:7,4:11:7.01:121,7,0	0/1:2,3:5:1.15:48,0,1	1/1:1,3:4:11.88:81,12,0	0/1:1,1:2:5.53:14,0,6	0/1:6,0:5:0.03:1,0,0	1/1:1,3:4:11.89:82,12,0	1/1:12,0:12:15.91:66,16,0	0/0:6,1:6:11.67:0,12,166	0/1:3,3:4:11.17:11,0,45	1/1:1,6:7:20.40:130,20,0	0/0:4,0:4:4.86:0,5,24	0/1:4,6:10:10.45:79,0,10	1/1:3,3:6:14.59:97,15,0	./.	1/1:1,4:5:14.84:100,15,0	0/1:2,4:6:25.48:44,0,25	1/1:1,6:7:0.87:100,1,0	1/1:2,2:4:8.45:51,8,0
chr10	26840101	.	GC	G	14452.59	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-0.040;DP=590;FS=10.194;HRun=7;HaplotypeScore=58.3098;InbreedingCoeff=0.9376;MQ=83.50;MQ0=0;MQRankSum=-8.381;QD=26.09;ReadPosRankSum=5.927;VQSLOD=4.6334;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,19:28:51.10:520,51,0	1/1:0,9:9:27.06:275,27,0	0/0:20,0:20:21.70:0,22,482	0/0:15,0:16:29.83:0,30,314	1/1:3,35:38:99:1009,99,0	1/1:0,33:33:90.21:918,90,0	1/1:2,15:17:39.09:398,39,0	1/1:7,29:36:81.17:826,81,0	1/1:0,15:15:36.08:367,36,0	1/1:2,21:23:63.14:643,63,0	1/1:2,17:19:48.10:489,48,0	1/1:3,13:16:36.08:367,36,0	1/1:0,11:11:33.08:337,33,0	1/1:2,18:20:39.08:398,39,0	1/1:1,18:19:51.12:520,51,0	1/1:1,21:22:63.14:643,63,0	1/1:1,16:17:42.10:429,42,0	1/1:1,3:4:6.01:61,6,0	1/1:1,23:24:66.12:661,66,0	1/1:1,33:34:96.22:978,96,0	1/1:1,7:8:15.03:153,15,0	1/1:1,32:33:96.22:980,96,0	1/1:4,28:32:78.18:796,78,0	1/1:2,15:17:45.10:459,45,0	1/1:0,13:13:36.08:367,36,0	1/1:1,27:28:81.15:816,81,0	1/1:2,27:29:75.17:765,75,0	1/1:0,9:9:27.06:275,27,0
chr10	26842013	.	AT	A	10013.27	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-5.647;DP=451;FS=12.129;HRun=8;HaplotypeScore=55.0379;InbreedingCoeff=0.9477;MQ=75.00;MQ0=0;MQRankSum=-6.819;QD=23.67;ReadPosRankSum=3.806;VQSLOD=4.7659;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,33:35:78.12:753,78,0	1/1:0,5:5:12.02:116,12,0	0/0:13,0:12:24.06:0,24,270	0/0:15,0:15:32.04:0,32,396	1/1:2,23:25:58.91:517,59,0	1/1:0,14:14:36.06:348,36,0	1/1:3,14:17:36.05:348,36,0	1/1:6,18:24:54.06:517,54,0	1/1:0,10:10:27.04:261,27,0	1/1:1,17:18:51.07:488,51,0	1/1:2,10:12:29.13:288,29,0	1/1:1,16:17:45.07:435,45,0	1/1:1,13:14:33.05:319,33,0	1/1:1,12:13:33.05:318,33,0	1/1:1,19:20:48.08:463,48,0	1/1:1,18:19:48.07:463,48,0	1/1:1,21:22:57.09:550,57,0	1/1:2,10:12:29.64:271,30,0	1/1:4,13:17:39.06:377,39,0	1/1:1,19:20:53.97:501,54,0	1/1:1,10:11:27.04:261,27,0	1/1:1,3:4:9.01:87,9,0	1/1:1,8:9:23.94:219,24,0	1/1:1,13:14:35.98:335,36,0	1/1:0,28:28:75.12:724,75,0	1/1:0,16:16:47.97:438,48,0	1/1:3,18:21:47.56:444,48,0	1/1:0,6:6:18.03:174,18,0
chr10	26843445	.	A	AG	883.83	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.525;DP=656;FS=25.336;HRun=1;HaplotypeScore=105.7560;InbreedingCoeff=0.9902;MQ=78.21;MQ0=0;MQRankSum=-7.309;QD=25.99;ReadPosRankSum=-2.857;VQSLOD=1.6037;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,108,1402	0/0:13,0:13:39.13:0,39,506	0/0:15,0:15:29.71:0,30,382	0/0:20,0:20:18.90:0,19,463	0/0:24,0:24:72.23:0,72,932	0/0:28,0:28:81.25:0,81,1038	0/0:25,0:25:75.23:0,75,960	1/1:10,7:17:51.12:626,51,0	0/0:29,0:29:87.28:0,87,1128	0/0:40,0:40:99:0,120,1547	0/0:24,0:24:69.21:0,69,882	0/0:29,0:29:87.28:0,87,1128	0/0:23,0:23:63.19:0,63,800	0/0:19,0:19:57.19:0,57,740	1/1:3,5:8:24.01:254,24,0	0/0:26,0:26:75.24:0,75,974	1/1:3,6:8:15.02:145,15,0	0/0:13,0:13:39.13:0,39,506	0/0:20,0:20:60.16:0,60,761	0/0:28,0:28:78.25:0,78,1013	0/0:21,0:21:63.19:0,63,802	0/0:25,0:25:72.21:0,72,908	0/0:29,0:29:81.24:0,81,1029	0/0:29,0:29:87.24:0,87,1111	0/0:28,0:28:81.26:0,81,1052	0/0:35,0:35:99:0,105,1341	0/0:34,0:34:99:0,102,1324	0/0:8,0:8:24.06:0,24,296
chr10	26843454	.	CTG	C	182.31	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=5.937;DP=647;FS=30.741;HRun=0;HaplotypeScore=115.2263;InbreedingCoeff=0.9650;MQ=77.63;MQ0=0;MQRankSum=-5.792;QD=12.15;ReadPosRankSum=1.125;VQSLOD=1.7130;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,114,2262	0/0:14,0:14:42.14:0,42,853	0/0:14,0:14:39.08:0,39,669	0/0:17,0:17:35.85:0,36,576	0/0:26,0:26:78.27:0,78,1584	0/0:29,0:29:84.29:0,84,1695	0/0:24,0:24:72.25:0,72,1463	1/1:0,4:4:12.02:115,12,0	0/0:31,0:31:93.28:0,93,1753	0/0:42,0:42:99:0,126,2558	0/0:21,0:21:63.19:0,63,1208	0/0:33,0:33:99:0,99,2011	0/0:24,0:24:72.25:0,72,1427	0/0:20,0:20:60.19:0,60,1162	1/1:0,5:5:11.99:100,12,0	0/0:27,0:27:81.28:0,81,1634	1/1:0,6:6:11.98:99,12,0	0/0:13,0:13:36.10:0,36,675	0/0:19,0:19:57.20:0,57,1147	0/0:31,0:31:93.32:0,93,1877	0/0:21,0:21:63.22:0,63,1277	0/0:23,0:23:69.22:0,69,1365	0/0:27,0:27:75.26:0,75,1523	0/0:26,0:26:78.27:0,78,1584	0/0:30,0:30:84.28:0,84,1659	0/0:37,0:37:99:0,111,2244	0/0:37,0:37:99:0,111,2194	0/0:8,0:8:24.08:0,24,487
chr10	26843457	.	AGC	A	181.75	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=5.938;DP=650;FS=30.767;HRun=0;HaplotypeScore=117.0764;InbreedingCoeff=0.9649;MQ=79.66;MQ0=0;MQRankSum=-5.896;QD=12.12;ReadPosRankSum=1.175;VQSLOD=1.2788;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,108,2193	0/0:15,0:15:45.15:0,45,903	0/0:15,0:15:42.11:0,42,775	0/0:19,0:19:41.81:0,42,648	0/0:26,0:26:78.25:0,78,1547	0/0:31,0:31:90.30:0,90,1791	0/0:24,0:24:72.25:0,72,1462	1/1:0,4:4:12.02:115,12,0	0/0:27,0:27:81.28:0,81,1645	0/0:43,0:43:99:0,129,2543	0/0:19,0:19:57.18:0,57,1118	0/0:34,0:34:99:0,102,2049	0/0:25,0:25:75.24:0,75,1462	0/0:19,0:19:57.18:0,57,1121	1/1:0,5:5:11.99:99,12,0	0/0:27,0:27:81.26:0,81,1609	1/1:0,6:6:11.98:98,12,0	0/0:11,0:11:30.06:0,30,568	0/0:22,0:22:66.21:0,66,1273	0/0:30,0:30:90.31:0,90,1824	0/0:21,0:21:63.20:0,63,1242	0/0:23,0:23:69.22:0,69,1339	0/0:26,0:26:75.24:0,75,1486	0/0:26,0:26:78.25:0,78,1547	0/0:30,0:30:84.29:0,84,1693	0/0:38,0:38:99:0,114,2283	0/0:40,0:40:99:0,120,2373	0/0:8,0:8:24.08:0,24,487
chr10	26843573	.	G	GC	255	PASS	AC=4;AF=0.074;AN=54;BaseQRankSum=0.685;DP=662;FS=4.885;HRun=0;HaplotypeScore=79.0156;InbreedingCoeff=0.9010;MQ=84.87;MQ0=0;MQRankSum=-2.998;QD=28.33;ReadPosRankSum=-3.059;VQSLOD=2.8240;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,126,1760	0/0:19,0:19:57.15:0,57,774	0/0:20,0:20:57.02:0,57,720	0/0:27,0:27:76.44:0,76,989	0/0:38,0:38:99:0,99,1382	0/0:24,0:24:69.22:0,69,945	0/0:13,0:13:39.10:0,39,507	1/1:0,8:8:24.07:339,24,0	0/0:27,0:27:81.26:0,81,1113	0/0:31,0:31:93.26:0,93,1265	0/0:28,0:28:72.24:0,72,1005	0/0:22,0:22:66.21:0,66,907	0/0:20,0:20:60.20:0,60,839	0/0:21,0:21:63.21:0,63,881	1/1:0,1:1:2.99:24,3,0	0/0:22,0:22:66.22:0,66,923	./.	0/0:15,0:15:45.15:0,45,629	0/0:25,0:25:75.25:0,75,1049	0/0:46,0:46:99:0,123,1698	0/0:24,0:24:72.17:0,72,932	0/0:34,0:34:96.25:0,96,1317	0/0:37,0:37:93.30:0,93,1282	0/0:20,0:20:60.20:0,60,838	0/0:25,0:25:75.25:0,75,1047	0/0:29,0:29:87.29:0,87,1217	0/0:30,0:30:87.29:0,87,1216	0/0:13,0:13:39.09:0,39,481
chr10	26843612	.	AG	A	62.13	PASS	AC=2;AF=0.038;AN=52;BaseQRankSum=3.426;DP=622;FS=12.808;HRun=1;HaplotypeScore=70.7567;InbreedingCoeff=0.9684;MQ=87.96;MQ0=0;MQRankSum=-3.132;QD=15.53;ReadPosRankSum=-0.789;VQSLOD=2.0865;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:93.19:0,93,1352	0/0:18,0:18:54.12:0,54,793	0/0:23,0:23:69.21:0,69,1048	0/0:30,0:30:85.50:0,85,1237	0/0:40,0:40:99:0,114,1706	0/0:26,0:26:78.21:0,78,1147	0/0:19,0:19:57.11:0,57,791	1/1:0,4:4:12.04:148,12,0	0/0:23,0:23:69.22:0,69,1057	0/0:32,0:32:96.33:0,96,1499	0/0:21,0:21:63.10:0,63,896	0/0:26,0:26:78.25:0,78,1198	0/0:20,0:20:60.17:0,60,911	0/0:19,0:19:57.15:0,57,821	./.	0/0:19,0:19:57.16:0,57,846	./.	0/0:14,0:14:42.12:0,42,625	0/0:24,0:24:72.25:0,72,1126	0/0:34,0:34:96.31:0,96,1474	0/0:24,0:24:72.24:0,72,1122	0/0:29,0:29:87.30:0,87,1355	0/0:31,0:31:90.11:0,90,1298	0/0:14,0:14:42.14:0,42,657	0/0:29,0:29:87.23:0,87,1317	0/0:26,0:26:75.25:0,75,1165	0/0:26,0:26:78.26:0,78,1197	0/0:20,0:20:60.16:0,60,903
chr10	26843661	.	G	GTA	85.36	PASS	AC=2;AF=0.038;AN=52;BaseQRankSum=3.350;DP=558;FS=8.846;HRun=0;HaplotypeScore=76.5264;InbreedingCoeff=0.9225;MQ=86.42;MQ0=0;MQRankSum=-1.640;QD=14.23;ReadPosRankSum=-0.049;VQSLOD=2.7993;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:78.10:0,78,1072	0/0:9,0:9:21.07:0,21,309	0/0:25,0:25:69.23:0,69,998	0/0:18,0:18:16.03:0,16,568	0/0:24,0:24:57.19:0,57,837	0/0:23,0:23:57.19:0,57,839	0/0:20,0:20:57.11:0,57,793	1/1:1,5:6:9.03:168,9,0	0/0:23,0:23:63.08:0,63,874	0/0:36,0:36:99:0,105,1522	0/0:18,0:18:48.16:0,48,706	0/0:24,0:24:63.13:0,63,899	0/0:14,0:14:39.13:0,39,574	0/0:22,0:22:63.14:0,63,901	./.	0/0:25,0:24:75.05:0,75,1005	./.	0/0:16,0:16:44.95:0,45,604	0/0:14,0:14:42.12:0,42,567	0/0:26,0:26:69.22:0,69,996	0/0:18,0:18:54.18:0,54,794	0/0:27,0:27:63.20:0,63,906	0/0:31,0:31:87.14:0,87,1225	0/0:16,0:16:48.16:0,48,706	0/0:21,0:21:60.12:0,60,837	0/0:26,0:26:72.24:0,72,1059	0/0:26,0:26:75.12:0,75,1047	0/0:22,0:22:66.15:0,66,924
chr10	26843734	.	GA	G	689.51	PASS	AB=0.913;AC=7;AF=0.125;AN=56;BaseQRankSum=8.550;DP=536;FS=32.257;HRun=9;HaplotypeScore=68.2295;InbreedingCoeff=0.7295;MQ=77.09;MQ0=0;MQRankSum=-4.479;QD=12.77;ReadPosRankSum=-3.054;VQSLOD=0.4784;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:60.14:0,60,677	0/0:8,0:8:15.04:0,15,173	0/0:16,0:16:4.14:0,4,268	0/1:19,2:20:32.70:33,0,288	0/0:21,0:21:47.98:0,48,495	0/0:23,1:24:66.20:0,66,761	0/0:14,0:15:38.91:0,39,415	1/1:4,19:23:57.03:521,57,0	0/0:17,0:17:48.14:0,48,554	0/0:23,0:23:54.15:0,54,616	0/0:22,0:22:63.10:0,63,697	0/0:17,1:18:23.60:0,24,497	0/0:23,0:23:66.20:0,66,761	0/0:21,0:21:54.09:0,54,594	1/1:0,9:9:27.01:247,27,0	0/0:30,0:29:69.17:0,69,781	1/1:0,1:1:3:27,3,0	0/0:13,0:13:33.10:0,33,381	0/0:20,0:21:57:0,57,637	0/0:22,0:22:54.04:0,54,579	0/0:11,0:11:27.08:0,27,312	0/0:22,0:22:60:0,60,624	0/0:26,0:26:57.13:0,57,643	0/0:17,0:17:48.14:0,48,554	0/0:25,0:25:69.16:0,69,781	0/0:25,0:25:67.08:0,67,763	0/0:28,0:28:72.15:0,72,802	0/0:10,0:10:27.08:0,27,312
chr10	26843836	.	GTCTAGCA	G	1517.16	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=5.144;DP=525;FS=14.156;HRun=0;HaplotypeScore=191.8341;InbreedingCoeff=0.9505;MQ=85.94;MQ0=0;MQRankSum=-3.790;QD=45.97;ReadPosRankSum=-2.611;VQSLOD=2.1725;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:27.09:0,27,1131	0/0:12,0:12:33.10:0,33,1233	0/0:19,0:19:57.20:0,57,2267	0/0:28,0:28:68.32:0,68,2646	0/0:30,0:30:84.27:0,84,3409	0/0:24,0:24:72.25:0,72,2974	0/0:20,0:20:57.14:0,57,2049	1/1:0,21:21:50.98:1064,51,0	0/0:16,0:17:48.16:0,48,1854	0/0:31,0:31:93.31:0,93,3769	0/0:17,0:17:48.12:0,48,1840	0/0:16,0:16:48.13:0,48,1905	0/0:28,0:28:81.28:0,81,3325	0/0:15,0:15:42.13:0,42,1655	1/1:1,2:3:6.02:167,6,0	0/0:22,0:22:63.22:0,63,2600	1/1:0,9:9:15.05:418,15,0	0/0:7,0:7:18.06:0,18,661	0/0:21,0:21:57.20:0,57,2153	0/0:22,0:22:66.13:0,66,2423	0/0:8,0:8:21.03:0,21,774	0/0:29,0:29:81.19:0,81,3164	0/0:17,0:17:48.09:0,48,1563	0/0:21,0:21:54.14:0,54,2151	0/0:20,0:20:54.17:0,54,2157	0/0:24,0:24:69.18:0,69,2758	0/0:22,0:22:63.20:0,63,2467	0/0:10,0:10:30.09:0,30,1144
chr10	26843880	.	TCATGTACTCTAAA	T	17678.25	PASS	AC=44;AF=0.815;AN=54;BaseQRankSum=11.230;DP=401;FS=81.933;HRun=0;HaplotypeScore=240.6707;InbreedingCoeff=0.9030;MQ=81.80;MQ0=0;MQRankSum=-6.027;QD=58.15;ReadPosRankSum=7.925;VQSLOD=0.7768;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,5:9:12.04:457,12,0	1/1:2,2:4:6.02:229,6,0	0/0:18,0:18:32.22:0,32,1188	0/0:16,0:16:21.52:0,22,792	1/1:9,13:22:30.10:1066,30,0	1/1:6,9:15:27.09:1029,27,0	1/1:6,7:13:21.07:801,21,0	0/0:38,0:38:96.28:0,96,4718	1/1:2,6:8:18.06:686,18,0	1/1:9,7:16:21.07:801,21,0	1/1:7,7:14:21.07:800,21,0	1/1:8,7:15:21.07:800,21,0	1/1:6,11:17:36.11:1282,36,0	1/1:6,5:11:18.06:686,18,0	0/0:11,0:11:33.11:0,33,2054	1/1:9,7:16:24.08:915,24,0	0/0:11,0:11:21.07:0,21,1321	1/1:1,2:3:3.01:114,3,0	1/1:15,5:20:21.04:622,21,0	1/1:6,10:16:30.10:1143,30,0	./.	1/1:10,10:20:33.10:1169,33,0	1/1:5,7:12:21.07:800,21,0	1/1:7,6:13:15.05:571,15,0	1/1:7,8:15:27.08:941,27,0	1/1:10,10:20:33.07:1164,33,0	1/1:5,11:16:33.11:1258,33,0	1/1:6,3:9:9.03:343,9,0
chr10	26843931	.	TG	T	8669.72	PASS	AC=42;AF=0.808;AN=52;BaseQRankSum=14.371;DP=358;FS=66.605;HRun=3;HaplotypeScore=237.5133;InbreedingCoeff=0.9621;MQ=85.02;MQ0=0;MQRankSum=-11.284;QD=34.27;ReadPosRankSum=4.328;VQSLOD=-0.5068;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,5:5:11.97:129,12,0	1/1:0,6:6:18.06:222,18,0	0/0:15,0:15:42.12:0,42,581	0/0:21,0:21:63.16:0,63,849	1/1:0,11:11:20.98:239,21,0	1/1:0,17:17:51.16:630,51,0	1/1:0,11:11:30.03:351,30,0	0/0:30,0:30:78.25:0,78,1096	1/1:0,10:10:30.09:371,30,0	1/1:0,12:12:36.11:445,36,0	1/1:0,9:9:27.08:333,27,0	1/1:0,15:15:45.01:517,45,0	1/1:0,23:23:69.22:852,69,0	1/1:0,9:9:21.07:259,21,0	0/0:18,0:18:54.18:0,54,776	1/1:0,13:13:39.12:482,39,0	0/0:21,0:21:54.18:0,54,777	./.	1/1:0,12:12:33.10:408,33,0	1/1:0,16:16:48.07:558,48,0	./.	1/1:0,11:11:33.10:407,33,0	1/1:0,10:10:29.92:316,30,0	1/1:0,9:9:17.89:185,18,0	1/1:0,16:16:48.04:556,48,0	1/1:0,16:16:48.15:592,48,0	1/1:0,20:20:60.19:741,60,0	1/1:0,2:2:6.02:74,6,0
chr10	26844009	.	A	AGT	9341.10	PASS	AC=44;AF=0.815;AN=54;BaseQRankSum=12.141;DP=290;FS=55.475;HRun=0;HaplotypeScore=155.0754;InbreedingCoeff=0.9035;MQ=87.28;MQ0=0;MQRankSum=-12.034;QD=49.16;ReadPosRankSum=5.106;VQSLOD=0.9724;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,7:7:21.07:358,21,0	1/1:0,4:4:12.04:219,12,0	0/0:13,0:14:26.41:0,26,281	0/0:15,0:15:18.68:0,19,242	1/1:0,14:14:39.13:668,39,0	1/1:1,9:10:30.06:512,30,0	1/1:1,7:8:24.08:399,24,0	0/0:37,0:37:99:0,108,1659	1/1:1,7:8:24.04:403,24,0	1/1:0,5:5:15.05:268,15,0	1/1:0,5:5:15.04:245,15,0	1/1:0,7:7:21.07:372,21,0	1/1:0,14:15:45.11:761,45,0	1/1:0,3:3:9.03:164,9,0	0/0:16,0:16:48.15:0,48,741	1/1:1,10:11:30.10:547,30,0	0/0:18,0:18:48.16:0,48,749	1/1:1,2:3:9.03:155,9,0	1/1:4,6:10:30.10:501,30,0	1/1:2,11:13:39.13:674,39,0	1/1:2,4:6:8.94:159,9,0	1/1:2,10:12:33.11:582,33,0	1/1:2,12:14:39.08:648,39,0	1/1:1,0:1:3.01:37,3,0	1/1:2,9:11:33.07:523,33,0	1/1:2,11:13:39.13:684,39,0	1/1:2,8:10:27.08:461,27,0	./.
chr10	26844019	.	G	GGT	10184.80	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=10.307;DP=325;FS=49.159;HRun=0;HaplotypeScore=135.1749;InbreedingCoeff=0.8609;MQ=86.47;MQ0=1;MQRankSum=-12.413;QD=46.09;ReadPosRankSum=1.024;VQSLOD=1.5581;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,9:10:24.04:441,24,0	1/1:1,3:4:11.96:196,12,0	0/0:13,0:14:2.12:0,2,274	0/0:17,0:17:16.69:0,17,338	1/1:3,12:15:39.01:622,39,0	1/1:2,7:10:30.02:546,30,0	1/1:2,8:10:24.04:408,24,0	0/0:41,0:41:99:0,117,1746	1/1:0,11:11:30.10:522,30,0	1/1:3,4:7:17.95:277,18,0	1/1:5,2:7:17.75:194,18,0	1/1:3,6:8:23.91:338,24,0	1/1:4,11:15:42.05:744,42,0	1/1:1,3:4:11.95:170,12,0	0/0:17,0:17:51.15:0,51,800	1/1:4,8:12:32.85:498,33,0	0/0:15,0:15:45.07:0,45,670	1/1:0,5:5:12.04:241,12,0	1/1:3,11:14:38.93:719,39,0	1/1:1,12:14:42.13:779,42,0	1/1:1,6:7:18.53:317,19,0	1/1:2,12:14:39.02:682,39,0	1/1:3,10:13:38.77:591,39,0	1/1:0,1:1:3.01:53,3,0	1/1:4,11:14:38.98:633,39,0	1/1:6,5:12:35.85:519,36,0	1/1:1,9:10:30.10:600,30,0	1/1:0,2:2:6.02:95,6,0
chr10	26844172	.	CG	C	2141.63	PASS	AC=36;AF=0.783;AN=46;BaseQRankSum=10.895;DP=187;FS=59.813;HRun=1;HaplotypeScore=82.4679;InbreedingCoeff=0.6950;MQ=106.65;MQ0=0;MQRankSum=-11.167;QD=27.11;ReadPosRankSum=5.629;VQSLOD=-0.4409;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	1/1:0,3:3:6.02:69,6,0	0/0:12,0:12:36.11:0,36,542	0/0:16,0:16:42.35:0,42,665	1/1:0,2:2:3.01:32,3,0	./.	1/1:0,8:8:24.07:272,24,0	0/0:39,0:39:99:0,117,1769	1/1:1,4:5:15:157,15,0	1/1:0,1:1:3.01:37,3,0	1/1:0,6:6:15.04:166,15,0	1/1:1,3:4:12:125,12,0	1/1:1,1:2:3.01:34,3,0	1/1:1,2:3:6.02:69,6,0	0/0:23,0:23:69.22:0,69,1078	1/1:0,3:3:8.95:76,9,0	0/0:17,0:17:51.17:0,51,807	1/1:0,1:1:3.01:36,3,0	1/1:0,3:3:9.02:100,9,0	1/1:0,12:12:35.69:391,36,0	1/1:1,2:3:3.01:34,3,0	./.	1/1:0,4:4:12.03:138,12,0	1/1:0,3:3:2.98:34,3,0	1/1:0,8:8:24.07:273,24,0	1/1:1,7:8:21.07:259,21,0	./.	./.
chr10	26844176	.	GATAT	G	3562.77	PASS	AC=36;AF=0.783;AN=46;BaseQRankSum=10.798;DP=178;FS=81.780;HRun=0;HaplotypeScore=90.6301;InbreedingCoeff=0.6767;MQ=110.73;MQ0=0;MQRankSum=-10.719;QD=49.48;ReadPosRankSum=5.903;VQSLOD=0.7180;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	1/1:0,3:3:6.02:111,6,0	0/0:14,0:14:35.30:0,35,1072	0/0:15,0:15:42.14:0,42,1118	1/1:0,2:2:3.01:56,3,0	./.	1/1:0,8:8:24.08:446,24,0	0/0:38,0:38:99:0,114,3228	1/1:0,4:4:12.04:224,12,0	1/1:0,1:1:3.01:57,3,0	1/1:0,6:6:15.05:278,15,0	1/1:0,3:3:9.03:167,9,0	1/1:0,1:1:3.01:56,3,0	1/1:0,2:2:6.02:111,6,0	0/0:23,0:23:69.24:0,69,1981	1/1:1,1:2:5.89:72,6,0	0/0:16,0:16:48.16:0,48,1391	1/1:0,1:1:3.01:55,3,0	1/1:1,2:3:8.90:128,9,0	1/1:0,12:12:36.12:637,36,0	1/1:1,1:2:3.01:57,3,0	./.	1/1:0,4:4:12.04:209,12,0	1/1:0,3:3:2.57:55,3,0	1/1:0,8:8:24.08:445,24,0	1/1:0,7:7:21.07:398,21,0	./.	./.
chr10	26844182	.	ACT	A	2513.90	PASS	AC=36;AF=0.783;AN=46;BaseQRankSum=10.798;DP=172;FS=90.173;HRun=0;HaplotypeScore=83.4002;InbreedingCoeff=0.6592;MQ=107.53;MQ0=0;MQRankSum=-10.751;QD=36.43;ReadPosRankSum=6.461;VQSLOD=0.3684;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	1/1:0,3:3:6.02:84,6,0	0/0:14,0:14:42.14:0,42,836	0/0:12,0:12:32.85:0,33,647	1/1:0,2:2:3.01:43,3,0	./.	1/1:0,8:8:24.08:337,24,0	0/0:37,0:37:99:0,111,2250	1/1:0,4:4:12.04:169,12,0	1/1:0,1:1:3.01:44,3,0	1/1:0,6:6:15.05:210,15,0	1/1:0,3:3:9.03:126,9,0	1/1:0,1:1:3.01:42,3,0	1/1:0,2:2:6.02:84,6,0	0/0:23,0:23:69.22:0,69,1365	1/1:0,1:1:3.01:43,3,0	0/0:17,0:17:51.18:0,51,1036	1/1:0,1:1:3.01:42,3,0	1/1:0,2:2:6.02:86,6,0	1/1:0,12:12:35.95:475,36,0	1/1:0,1:1:3.01:43,3,0	./.	1/1:0,4:4:12.04:162,12,0	1/1:0,3:3:3.01:42,3,0	1/1:0,8:8:24.08:336,24,0	1/1:0,7:7:21.07:305,21,0	./.	./.
chr10	26844220	.	T	TC	1162.55	PASS	AC=38;AF=0.826;AN=46;BaseQRankSum=8.924;DP=122;FS=40.158;HRun=0;HaplotypeScore=46.9217;InbreedingCoeff=0.5211;MQ=57.19;MQ0=0;MQRankSum=-8.326;QD=21.53;ReadPosRankSum=2.855;VQSLOD=1.7693;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,1:1:3:26,3,0	./.	0/0:3,0:2:1.25:0,1,3	./.	./.	1/1:0,3:3:9:76,9,0	1/1:0,2:2:5.37:34,5,0	0/0:28,0:28:78.26:0,78,1091	1/1:0,7:7:21:179,21,0	1/1:0,1:1:3:29,3,0	1/1:0,1:1:2.99:24,3,0	1/1:0,4:4:12:103,12,0	1/1:0,2:2:3:25,3,0	1/1:0,4:4:9:77,9,0	0/0:20,0:20:60.14:0,60,799	1/1:0,2:2:5.60:36,6,0	0/0:15,0:15:45.14:0,45,612	1/1:0,2:2:6:53,6,0	1/1:1,7:8:15.49:199,15,0	1/1:0,6:6:17.99:152,18,0	1/1:0,2:2:6:52,6,0	./.	1/1:0,1:1:3:25,3,0	1/1:0,1:1:3.01:45,3,0	1/1:0,2:2:6:52,6,0	1/1:0,4:4:12.01:110,12,0	1/1:0,1:1:1.55:4,2,0	./.
chr10	26844225	.	T	TC	1186.97	PASS	AC=38;AF=0.864;AN=44;BaseQRankSum=9.036;DP=117;FS=40.021;HRun=0;HaplotypeScore=47.1099;InbreedingCoeff=0.5106;MQ=46.80;MQ0=0;MQRankSum=-8.538;QD=22.83;ReadPosRankSum=2.872;VQSLOD=1.7063;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,1:1:3:27,3,0	./.	./.	./.	./.	1/1:0,3:3:9:79,9,0	1/1:0,2:2:5.94:45,6,0	0/0:27,0:27:81.23:0,81,1071	1/1:0,7:7:21.01:187,21,0	1/1:0,1:1:3.01:30,3,0	1/1:0,1:1:3:25,3,0	1/1:0,4:4:12.01:107,12,0	1/1:0,2:2:3:26,3,0	1/1:0,4:4:9:79,9,0	0/0:19,0:19:57.18:0,57,781	1/1:0,2:2:5.96:46,6,0	0/0:15,0:15:45.15:0,45,629	1/1:0,2:2:6.01:55,6,0	1/1:1,5:6:18.02:175,18,0	1/1:0,6:6:18:158,18,0	1/1:0,2:2:6.01:54,6,0	./.	1/1:0,1:1:3:26,3,0	1/1:0,1:1:2.94:18,3,0	1/1:0,2:2:6:53,6,0	1/1:0,4:4:12.02:114,12,0	1/1:0,1:1:2.96:19,3,0	./.
chr10	26844298	.	G	GC	1310.23	PASS	AB=0.917;AC=29;AF=0.763;AN=38;BaseQRankSum=7.157;DP=129;FS=7.182;HRun=4;HaplotypeScore=47.9870;InbreedingCoeff=0.4773;MQ=38.09;MQ0=11;MQRankSum=-6.271;QD=18.72;ReadPosRankSum=-0.158;VQSLOD=2.4662;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,2:3:6.02:82,6,0	1/1:0,2:1:3.01:41,3,0	0/0:9,0:2:3.01:0,3,34	0/0:10,0:1:2.60:0,3,10	1/1:4,5:8:15.04:177,15,0	1/1:0,2:1:3.01:41,3,0	./.	0/0:21,0:21:51.08:0,51,554	./.	1/1:0,3:3:9.03:123,9,0	1/1:1,5:4:6.02:82,6,0	1/1:0,1:1:3.01:41,3,0	./.	./.	0/0:17,0:17:51.15:0,51,578	1/1:0,4:4:12.04:158,12,0	0/1:10,1:11:10.94:11,0,276	./.	./.	./.	./.	1/1:2,7:9:12.04:156,12,0	1/1:1,3:4:6.02:82,6,0	./.	1/1:2,5:6:12.04:164,12,0	1/1:0,3:3:9.03:123,9,0	1/1:1,3:4:6.02:82,6,0	1/1:0,2:2:6.02:82,6,0
chr10	26844319	.	AT	A	924.39	PASS	AC=24;AF=0.706;AN=34;BaseQRankSum=7.190;DP=110;FS=0.000;HRun=1;HaplotypeScore=52.2197;InbreedingCoeff=0.6162;MQ=48.96;MQ0=1;MQRankSum=-6.058;QD=19.67;ReadPosRankSum=1.713;VQSLOD=3.7353;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,1:1:3.01:41,3,0	1/1:0,2:1:3.01:41,3,0	0/0:6,0:3:8.94:0,9,84	0/0:5,0:2:3.48:0,3,36	1/1:1,8:8:6.02:80,6,0	1/1:0,3:2:3.01:41,3,0	./.	0/0:15,0:15:42.14:0,42,642	./.	1/1:0,4:4:12:145,12,0	1/1:0,4:2:3.01:41,3,0	./.	./.	./.	0/0:19,0:19:57.18:0,57,883	1/1:0,3:3:9.03:125,9,0	0/0:14,0:14:39.13:0,39,616	./.	./.	./.	./.	1/1:0,9:9:18.06:243,18,0	1/1:0,4:4:3.01:41,3,0	./.	1/1:0,3:2:6.02:83,6,0	1/1:0,2:2:6.02:83,6,0	./.	1/1:1,2:3:8.62:94,9,0
chr10	26844362	.	AC	A	1110.03	PASS	AB=1.000;AC=31;AF=0.775;AN=40;BaseQRankSum=8.278;DP=139;FS=3.825;HRun=7;HaplotypeScore=58.6156;InbreedingCoeff=0.6118;MQ=60.66;MQ0=0;MQRankSum=-8.546;QD=16.09;ReadPosRankSum=0.094;VQSLOD=3.4978;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,2:3:6.01:61,6,0	./.	0/1:14,0:10:2.05:2,0,204	0/0:13,0:10:25.27:0,25,262	1/1:2,7:9:18.04:183,18,0	1/1:0,4:4:9.02:92,9,0	./.	0/0:18,0:18:48.13:0,48,578	1/1:0,1:1:3.01:31,3,0	1/1:0,4:4:12.03:122,12,0	1/1:0,2:2:6.01:61,6,0	1/1:0,1:1:3.01:31,3,0	1/1:0,5:5:9.02:92,9,0	./.	0/0:20,0:20:54.17:0,54,668	1/1:0,1:1:3.01:31,3,0	0/0:19,0:19:57.17:0,57,703	./.	./.	./.	./.	1/1:2,4:6:9.02:92,9,0	1/1:1,1:2:3.01:31,3,0	./.	1/1:1,3:4:9.02:92,9,0	1/1:0,1:1:3.01:31,3,0	1/1:1,6:7:15.03:153,15,0	1/1:0,5:5:15.03:153,15,0
chr10	26844663	.	T	TG	392.34	PASS	AC=16;AF=0.615;AN=26;BaseQRankSum=4.583;DP=220;FS=18.913;HRun=1;HaplotypeScore=35.6304;InbreedingCoeff=0.6701;MQ=61.57;MQ0=12;MQRankSum=-5.233;QD=14.53;ReadPosRankSum=1.764;VQSLOD=1.3883;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,7:7:6.02:90,6,0	./.	0/0:45,0:17:48.58:0,49,571	0/0:27,0:17:40.74:0,41,463	./.	1/1:0,1:1:3.01:45,3,0	1/1:0,3:3:3.01:45,3,0	0/0:53,0:50:99:0,132,1698	./.	./.	1/1:3,2:5:3.01:45,3,0	1/1:1,1:2:5.98:65,6,0	./.	./.	0/0:29,0:29:87.28:0,87,1130	./.	0/0:25,1:26:69.18:0,69,864	1/1:0,3:2:6.02:90,6,0	1/1:1,1:1:3.01:45,3,0	./.	./.	./.	./.	./.	./.	1/1:2,2:3:6.02:90,6,0	./.	./.
chr10	26844884	.	T	TCATC	2560.23	PASS	AC=30;AF=0.789;AN=38;BaseQRankSum=8.476;DP=170;FS=3.848;HRun=0;HaplotypeScore=49.8429;InbreedingCoeff=0.5882;MQ=41.34;MQ0=14;MQRankSum=-6.605;QD=55.66;ReadPosRankSum=0.847;VQSLOD=4.5680;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	1/1:1,0:1:3.01:36,3,0	0/0:17,0:7:11.99:0,12,149	./.	1/1:0,9:8:15.05:349,15,0	1/1:0,2:2:6.02:158,6,0	./.	0/0:33,0:29:66.20:0,66,1103	./.	1/1:1,6:7:15.03:339,15,0	1/1:0,1:1:3.01:79,3,0	1/1:0,3:3:9.03:237,9,0	1/1:0,2:1:3.01:79,3,0	1/1:0,1:1:3.01:79,3,0	0/0:28,0:28:84.29:0,84,1545	1/1:0,2:2:3.01:79,3,0	0/0:24,0:24:63.22:0,63,1154	./.	./.	1/1:0,1:1:3.01:79,3,0	./.	1/1:1,2:2:6.02:158,6,0	1/1:0,6:6:18.06:473,18,0	./.	1/1:0,2:2:6.02:158,6,0	1/1:0,4:4:12.04:316,12,0	1/1:1,1:1:3.01:79,3,0	./.
chr10	26845212	.	GTA	G	445.49	PASS	AC=24;AF=0.706;AN=34;BaseQRankSum=6.989;DP=173;FS=10.459;HRun=0;HaplotypeScore=35.8988;InbreedingCoeff=0.5237;MQ=39.53;MQ0=18;MQRankSum=-4.815;QD=11.72;ReadPosRankSum=0.295;VQSLOD=1.4324;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,2:1:3:26,3,0	1/1:0,2:2:6.02:67,6,0	./.	0/0:23,0:2:6.02:0,6,110	./.	1/1:0,4:1:3.01:31,3,0	1/1:0,3:1:3.01:31,3,0	0/0:32,0:25:63.20:0,63,1166	./.	1/1:0,1:1:3.01:34,3,0	1/1:1,6:7:17.61:128,18,0	./.	1/1:0,1:1:3.01:31,3,0	./.	0/0:28,0:26:75.24:0,75,1414	0/0:1,1:1:1.25:0,1,3	0/0:31,0:31:87.28:0,87,1634	./.	./.	1/1:1,1:2:3.01:32,3,0	./.	1/1:0,3:3:6.02:63,6,0	1/1:1,6:6:8.86:80,9,0	./.	1/1:0,3:3:3.01:32,3,0	1/1:1,2:1:2.94:18,3,0	./.	./.
chr10	26845220	.	GA	G	384.39	PASS	AC=22;AF=0.733;AN=30;BaseQRankSum=6.871;DP=171;FS=11.037;HRun=1;HaplotypeScore=35.6644;InbreedingCoeff=0.5548;MQ=39.32;MQ0=27;MQRankSum=-5.002;QD=11.65;ReadPosRankSum=0.401;VQSLOD=0.4736;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,2:1:2.99:24,3,0	1/1:0,2:2:6.01:56,6,0	./.	0/0:28,0:2:6.02:0,6,96	./.	1/1:0,4:1:3:28,3,0	1/1:0,3:1:3:27,3,0	0/0:31,0:22:54.16:0,54,838	./.	1/1:0,1:1:3:28,3,0	1/1:1,6:7:17.70:132,18,0	./.	1/1:0,1:1:3:27,3,0	./.	0/0:26,0:25:75.26:0,75,1197	./.	0/0:34,0:34:99:0,99,1533	./.	./.	1/1:0,1:1:3:27,3,0	./.	1/1:0,3:3:6:52,6,0	1/1:0,6:5:9:81,9,0	./.	1/1:0,3:3:3:27,3,0	./.	./.	./.
chr10	26845449	.	G	GT	411.37	PASS	AC=18;AF=0.643;AN=28;BaseQRankSum=5.742;DP=177;FS=6.092;HRun=4;HaplotypeScore=28.0456;InbreedingCoeff=0.6245;MQ=45.03;MQ0=8;MQRankSum=-5.076;QD=11.75;ReadPosRankSum=-0.908;VQSLOD=0.5573;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,4:4:6.02:81,6,0	./.	0/0:24,0:9:24.06:0,24,266	0/0:21,0:3:6.02:0,6,68	1/1:0,1:1:3.01:41,3,0	./.	./.	0/0:25,0:19:36.10:0,36,408	./.	./.	./.	./.	1/1:0,1:1:3.01:41,3,0	./.	0/0:29,0:29:78.22:0,78,885	./.	0/0:32,0:32:93.26:0,93,1054	1/1:2,1:1:3.01:41,3,0	1/1:3,8:4:9.03:123,9,0	1/1:2,3:3:3.01:41,3,0	1/1:1,4:5:5.98:54,6,0	./.	./.	1/1:1,3:4:6.01:73,6,0	./.	1/1:0,1:1:3.01:41,3,0	./.	./.
chr10	26846161	.	TG	T	2279.81	PASS	AC=4;AF=0.40;AN=10;BaseQRankSum=2.829;DP=143;FS=0.705;HRun=2;HaplotypeScore=67.2094;MQ=59.51;MQ0=9;MQRankSum=1.857;QD=36.19;ReadPosRankSum=0.058;VQSLOD=3.9724;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:26,1:15:45.14:0,45,679	0/0:30,0:18:53.94:0,54,770	./.	./.	./.	1/1:1,30:29:87.28:1195,87,0	./.	./.	./.	./.	./.	./.	0/0:22,0:22:66.23:0,66,1051	./.	1/1:1,31:32:84.28:1174,84,0	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.
chr10	26846726	.	CTGAT	C	1194.45	PASS	AC=2;AF=0.20;AN=10;BaseQRankSum=5.336;DP=140;FS=3.132;HRun=0;HaplotypeScore=112.1652;MQ=45.72;MQ0=6;MQRankSum=1.911;QD=41.19;ReadPosRankSum=2.043;VQSLOD=4.1982;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:28,0:14:42.10:0,42,1045	0/0:25,0:16:45.14:0,45,1071	./.	./.	./.	0/0:32,0:32:96.33:0,96,2545	./.	./.	./.	./.	./.	./.	1/1:5,24:29:47.20:1274,47,0	./.	0/0:26,0:26:75.26:0,75,1986	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.
chr10	26855047	.	GT	G	11810.62	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=13.692;DP=529;FS=26.357;HRun=3;HaplotypeScore=111.1519;InbreedingCoeff=0.9397;MQ=82.52;MQ0=0;MQRankSum=-10.396;QD=29.53;ReadPosRankSum=4.654;VQSLOD=2.9959;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,16:21:45.14:556,45,0	1/1:0,1:1:3.01:37,3,0	0/0:20,0:20:43.47:0,43,653	0/0:19,0:19:45.15:0,45,641	1/1:2,22:24:42.13:519,42,0	1/1:3,17:20:45.13:544,45,0	1/1:5,18:23:63.18:765,63,0	0/0:31,0:31:84.28:0,84,1194	1/1:1,30:31:66.21:817,66,0	1/1:0,22:21:63.20:779,63,0	1/1:0,13:13:33.10:408,33,0	1/1:1,17:18:39.12:483,39,0	1/1:1,18:19:48.15:594,48,0	1/1:0,19:19:42.13:520,42,0	0/0:37,0:37:99:0,108,1555	1/1:1,26:27:69.22:854,69,0	0/0:22,0:22:66.21:0,66,927	1/1:0,3:3:9.03:112,9,0	1/1:3,12:15:33.10:408,33,0	1/1:0,19:19:48.15:593,48,0	1/1:2,29:31:72.18:873,72,0	1/1:1,8:9:21.07:258,21,0	1/1:2,16:18:48.15:592,48,0	1/1:1,10:11:27.07:320,27,0	1/1:1,12:13:33.10:408,33,0	1/1:1,16:17:48.15:593,48,0	1/1:2,19:21:51.16:630,51,0	1/1:1,4:5:12.04:149,12,0
chr10	26855097	.	T	TG	15610.02	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=13.762;DP=561;FS=17.078;HRun=1;HaplotypeScore=117.2188;InbreedingCoeff=0.9809;MQ=85.60;MQ0=0;MQRankSum=-11.047;QD=37.17;ReadPosRankSum=4.425;VQSLOD=3.0186;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,22:25:66.20:943,66,0	1/1:1,3:4:9.03:135,9,0	0/0:21,0:21:63.20:0,63,805	0/0:25,0:25:66.19:0,66,821	1/1:4,25:29:75.19:1094,75,0	1/1:1,23:24:63.21:938,63,0	1/1:1,17:18:42.14:628,42,0	0/0:43,0:43:99:0,123,1575	1/1:4,22:26:57.18:830,57,0	1/1:1,19:19:54.18:807,54,0	1/1:3,12:15:36.04:509,36,0	1/1:1,13:14:36.12:537,36,0	1/1:4,22:26:72.23:1036,72,0	1/1:1,13:14:30.10:449,30,0	0/0:30,0:30:87.27:0,87,1117	1/1:4,16:20:54.13:744,54,0	0/0:22,0:22:63.19:0,63,802	1/1:1,6:7:18.06:269,18,0	1/1:2,22:24:63.19:914,63,0	1/1:0,19:18:45.15:666,45,0	1/1:7,18:25:66.21:954,66,0	1/1:0,21:21:57.11:825,57,0	1/1:1,18:19:51.17:759,51,0	1/1:0,14:14:33.11:482,33,0	1/1:3,10:13:36.12:521,36,0	1/1:2,18:20:48.16:717,48,0	1/1:1,16:17:42.14:628,42,0	1/1:1,5:6:15.05:223,15,0
chr10	26856262	.	G	GT	19690.54	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=4.607;DP=671;FS=4.742;HRun=4;HaplotypeScore=86.8870;InbreedingCoeff=0.9997;MQ=77.20;MQ0=0;MQRankSum=-3.149;QD=35.48;ReadPosRankSum=4.585;VQSLOD=5.0200;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,29:31:75.25:1026,75,0	1/1:1,11:12:29.79:410,30,0	0/0:21,0:20:51.14:0,51,571	0/0:14,0:14:39.08:0,39,427	1/1:2,29:31:87.20:1148,87,0	1/1:0,17:17:48.16:657,48,0	1/1:3,19:22:57.19:780,57,0	0/0:37,0:37:99:0,105,1190	1/1:2,23:25:54.18:739,54,0	1/1:7,23:30:72.24:976,72,0	1/1:0,25:25:69.19:923,69,0	1/1:2,26:29:78.26:1064,78,0	1/1:2,22:24:63.21:862,63,0	1/1:3,19:22:54.18:739,54,0	0/0:24,0:24:72.19:0,72,807	1/1:1,26:27:75.25:1026,75,0	0/0:20,0:19:60.15:0,60,669	1/1:1,12:13:33.11:451,33,0	1/1:3,26:29:78.25:1052,78,0	1/1:2,22:24:66.18:882,66,0	1/1:0,32:32:87.29:1190,87,0	1/1:0,17:17:51.17:698,51,0	1/1:3,22:25:63.21:860,63,0	1/1:1,19:19:57.19:780,57,0	1/1:3,29:32:78.26:1067,78,0	1/1:1,22:23:66.22:900,66,0	1/1:3,28:30:75.25:1026,75,0	1/1:4,10:14:33.10:435,33,0
chr10	26857268	.	A	ATGTGTGTGTG	2198.28	PASS	AB=0.822;AC=17;AF=0.304;AN=56;BaseQRankSum=5.229;DP=297;FS=4.265;HRun=0;HaplotypeScore=122.3979;InbreedingCoeff=-0.0118;MQ=42.84;MQ0=34;MQRankSum=-4.674;QD=15.48;ReadPosRankSum=2.542;VQSLOD=2.5215;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:11,1:10:5.70:0,6,39	0/0:2,0:2:3.01:0,3,69	0/0:15,0:8:24.08:0,24,763	0/0:15,0:9:27.09:0,27,850	0/1:12,0:13:17.07:115,0,17	0/1:10,3:16:75.38:75,0,126	0/1:10,1:9:38.17:60,0,38	0/0:19,0:17:46.79:0,47,1287	0/0:6,0:6:5.84:0,6,33	0/1:12,1:11:99:265,0,301	0/0:11,3:11:6.02:0,6,105	0/1:6,0:7:85.40:107,0,85	0/0:4,0:4:4.37:0,4,57	1/1:3,0:4:2.35:145,2,0	0/0:13,0:13:27.43:0,27,825	0/1:7,3:10:23.16:143,0,23	0/0:23,0:17:33.11:0,33,1018	0/0:6,0:4:1.61:0,2,156	1/1:6,0:5:8.38:139,8,0	0/0:9,1:8:0.47:0,0,2	0/0:6,0:5:3.01:0,3,54	1/1:5,1:6:0.72:3,1,0	0/0:6,0:6:6.49:0,6,101	0/0:2,0:2:4.26:0,4,39	0/1:10,2:11:38.47:58,0,38	0/1:16,3:16:99:436,0,213	1/1:7,3:9:10.46:567,10,0	0/1:4,2:5:68.42:237,0,68
chr10	26857270	.	AC	A	462.07	PASS	AB=0.820;AC=18;AF=0.321;AN=56;BaseQRankSum=3.566;DP=280;FS=4.724;HRun=1;HaplotypeScore=79.7929;InbreedingCoeff=0.1277;MQ=48.95;MQ0=33;MQRankSum=-1.382;QD=3.21;ReadPosRankSum=0.797;VQSLOD=0.0832;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:8,1:8:0.83:35,0,1	0/0:2,0:2:3.01:0,3,38	0/0:16,0:9:27.08:0,27,327	0/0:16,0:10:29.83:0,30,349	1/1:10,2:11:5.93:57,6,0	0/1:10,6:16:8.93:9,0,73	0/1:9,2:9:0.93:35,0,1	0/0:19,0:17:45.55:0,46,507	0/0:4,1:5:2.04:0,2,6	0/1:11,2:10:47.84:48,0,161	0/0:12,3:11:7.62:0,8,80	1/1:7,1:8:5.76:45,6,0	0/0:4,0:4:3.21:0,3,37	1/1:0,1:1:2.80:13,3,0	0/0:14,0:14:27.92:0,28,329	0/1:7,4:10:16.11:16,0,41	0/0:22,0:16:30.19:0,30,342	0/0:6,0:4:9.03:0,9,112	0/1:6,1:5:10.56:11,0,96	0/1:6,1:5:0.93:35,0,1	0/0:4,0:3:3.01:0,3,38	0/0:3,2:4:4.07:0,4,12	0/0:6,0:6:5.89:0,6,75	0/0:2,0:2:4.56:0,5,35	0/1:9,4:10:6.75:77,0,7	0/1:15,3:15:87.59:88,0,157	1/1:7,5:9:6.46:88,6,0	0/1:4,2:5:12.40:62,0,12
chr10	26857276	.	A	AT	66.74	PASS	AB=0.755;AC=4;AF=0.074;AN=54;BaseQRankSum=4.342;DP=371;FS=2.153;HRun=0;HaplotypeScore=82.9416;InbreedingCoeff=-0.0994;MQ=55.47;MQ0=22;MQRankSum=-4.358;QD=1.24;ReadPosRankSum=0.384;VQSLOD=1.9419;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:10,3:13:30.40:0,30,319	0/0:1,1:2:2.98:0,3,21	0/0:20,0:13:39.11:0,39,494	0/0:18,0:12:28.87:0,29,398	0/0:15,4:18:29.83:0,30,337	0/0:17,5:22:19.98:0,20,365	0/0:9,3:11:20.94:0,21,215	0/0:25,0:23:52.56:0,53,630	0/0:6,4:10:8.03:0,8,97	0/1:14,3:15:24.28:24,0,349	0/0:19,4:20:36.87:0,37,424	0/0:7,3:10:20.04:0,20,146	0/0:4,3:7:12.88:0,13,141	0/0:6,0:6:17.97:0,18,205	0/0:14,0:14:36.16:0,36,428	0/0:8,4:13:25.92:0,26,226	0/0:21,0:18:48.02:0,48,580	0/1:2,2:3:24.13:39,0,24	0/1:11,3:12:93.72:94,0,248	0/0:17,2:19:41.97:0,42,472	0/0:2,0:3:2.97:0,3,20	0/0:5,1:5:5:0,5,64	0/0:8,2:10:17.97:0,18,206	./.	0/0:14,2:13:21.93:0,22,336	0/1:10,9:16:16.81:17,0,274	0/0:17,3:19:42.09:0,42,534	0/0:7,0:7:17.99:0,18,203
chr10	26857404	.	A	AC	4788.57	PASS	AB=0.581;AC=45;AF=0.804;AN=56;BaseQRankSum=6.900;DP=337;FS=0.565;HRun=9;HaplotypeScore=57.3175;InbreedingCoeff=0.6593;MQ=73.51;MQ0=0;MQRankSum=-2.322;QD=18.42;ReadPosRankSum=0.674;VQSLOD=4.9355;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,5:7:14.91:147,15,0	1/1:3,0:3:2.99:24,3,0	0/0:6,0:6:5.99:0,6,52	0/0:8,0:8:3.42:0,3,19	0/1:5,13:18:38.68:293,0,39	1/1:7,14:21:39.11:430,39,0	1/1:2,5:7:12.03:133,12,0	0/0:27,0:28:49.97:0,50,423	1/1:0,7:7:21.06:232,21,0	1/1:7,10:17:30.05:319,30,0	1/1:4,12:16:13.10:364,13,0	1/1:2,3:6:8.81:81,9,0	1/1:2,8:10:21.06:232,21,0	1/1:3,5:8:21.05:224,21,0	0/0:11,0:13:34.05:0,34,269	1/1:4,9:16:35.54:327,36,0	0/0:22,0:22:59.99:0,60,521	1/1:3,5:8:10.45:159,10,0	1/1:9,12:21:3.98:258,4,0	1/1:7,6:13:12.50:133,13,0	1/1:1,3:4:9.02:99,9,0	1/1:1,4:5:9.02:100,9,0	1/1:2,9:11:20.85:232,21,0	1/1:3,0:3:6:58,6,0	1/1:2,5:7:6.02:66,6,0	1/1:5,7:12:15.04:166,15,0	1/1:8,13:21:12.98:346,13,0	1/1:3,16:19:33.09:364,33,0
chr10	26857504	.	GA	G	12772.27	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=9.820;DP=477;FS=11.156;HRun=4;HaplotypeScore=69.7466;InbreedingCoeff=0.9895;MQ=86.53;MQ0=0;MQRankSum=-6.064;QD=33.26;ReadPosRankSum=5.808;VQSLOD=4.5144;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,19:20:57.17:684,57,0	1/1:0,5:5:11.92:144,12,0	0/0:23,0:23:63.68:0,64,858	0/0:12,0:12:27.04:0,27,345	1/1:1,31:32:90.28:1080,90,0	1/1:1,18:19:45.14:540,45,0	1/1:0,13:13:33.10:396,33,0	0/0:28,0:28:84.26:0,84,1135	1/1:0,20:20:60.18:720,60,0	1/1:0,23:23:66.19:778,66,0	1/1:0,23:22:63.19:756,63,0	1/1:1,14:15:39.12:468,39,0	1/1:0,20:20:54.17:648,54,0	1/1:0,8:8:24.07:288,24,0	0/0:19,0:19:51.15:0,51,689	1/1:0,15:15:45.14:540,45,0	0/0:11,0:11:27.09:0,27,378	1/1:1,12:13:36.11:431,36,0	1/1:1,24:25:72.20:851,72,0	1/1:0,12:12:36.11:432,36,0	1/1:0,10:10:27.08:324,27,0	1/1:0,9:9:27.08:324,27,0	1/1:0,21:21:57.17:684,57,0	1/1:0,9:9:21.06:252,21,0	1/1:0,11:11:27.08:324,27,0	1/1:1,27:28:81.24:961,81,0	1/1:0,24:24:72.22:862,72,0	1/1:0,9:9:24.07:288,24,0
chr10	26857774	.	AC	A	16867.98	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=12.216;DP=531;FS=17.230;HRun=1;HaplotypeScore=82.7894;InbreedingCoeff=0.9823;MQ=94.62;MQ0=0;MQRankSum=-6.896;QD=39.50;ReadPosRankSum=8.297;VQSLOD=2.5875;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,11:11:30.10:419,30,0	1/1:0,7:7:18.06:252,18,0	0/0:23,0:23:69.23:0,69,1071	0/0:24,0:24:68.25:0,68,1031	1/1:0,33:33:90.30:1258,90,0	1/1:0,18:18:54.18:755,54,0	1/1:0,11:11:30.10:420,30,0	0/0:31,0:31:93.31:0,93,1460	1/1:0,19:19:51.17:713,51,0	1/1:0,27:27:81.24:1113,81,0	1/1:0,17:17:48.16:671,48,0	1/1:0,22:22:63.21:881,63,0	1/1:0,21:21:54.18:755,54,0	1/1:0,24:24:69.23:965,69,0	0/0:12,0:12:36.10:0,36,530	1/1:0,25:25:75.25:1049,75,0	0/0:14,0:14:39.13:0,39,619	1/1:0,3:3:9.03:126,9,0	1/1:0,17:17:51.17:713,51,0	1/1:0,13:13:33.11:461,33,0	1/1:0,25:25:75.25:1049,75,0	1/1:0,9:9:27.09:378,27,0	1/1:0,14:14:36.12:504,36,0	1/1:0,17:17:45.15:629,45,0	1/1:0,18:18:54.18:755,54,0	1/1:0,25:25:72.23:988,72,0	1/1:0,43:43:99:1762,126,0	1/1:0,8:8:18.06:252,18,0
chr10	26859056	.	AGT	A	4500.68	PASS	AB=1.000;AC=35;AF=0.625;AN=56;BaseQRankSum=13.010;DP=534;FS=14.434;HRun=0;HaplotypeScore=186.7813;InbreedingCoeff=0.0508;MQ=66.46;MQ0=0;MQRankSum=-7.598;QD=11.37;ReadPosRankSum=10.754;VQSLOD=2.1044;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:19:38.33:244,38,0	1/1:5,0:5:14.66:93,15,0	0/0:42,0:33:70.96:0,71,982	0/0:47,0:35:71.44:0,71,973	0/1:21,0:21:10.75:145,0,11	1/1:21,0:21:55.78:351,56,0	1/1:17,0:15:20.39:191,20,0	0/0:30,0:30:80.52:0,81,1515	1/1:15,2:17:37.94:299,38,0	0/1:26,0:26:33.66:282,0,34	1/1:15,0:15:26.23:159,26,0	0/1:18,0:18:49.44:193,0,49	1/1:23,1:24:25.83:388,26,0	0/1:10,0:10:3.54:82,0,4	0/0:19,0:19:33.01:0,33,581	1/1:16,0:16:16.10:225,16,0	0/1:9,0:9:22.81:23,0,149	0/1:5,0:5:12.17:25,0,12	0/1:11,0:11:15.82:72,0,16	1/1:24,1:24:63.80:408,64,0	0/1:16,0:16:19.44:101,0,19	0/1:13,0:13:48.37:160,0,48	0/1:23,0:23:78.65:190,0,79	1/1:13,0:13:17.45:111,17,0	1/1:22,0:22:8.80:270,9,0	0/1:22,0:21:21.94:233,0,22	0/1:21,0:21:67.44:155,0,67	0/1:7,0:7:1.22:101,0,1
chr10	26859058	.	TGA	T	10545.21	PASS	AB=1.000;AC=47;AF=0.839;AN=56;BaseQRankSum=9.021;DP=525;FS=0.000;HRun=0;HaplotypeScore=165.9068;InbreedingCoeff=0.8177;MQ=67.14;MQ0=0;MQRankSum=-5.638;QD=27.46;ReadPosRankSum=8.147;VQSLOD=5.2726;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,15:17:39.13:501,39,0	1/1:0,5:5:15.05:193,15,0	0/0:43,0:35:57.09:0,57,788	0/0:45,0:35:65.51:0,66,918	1/1:3,17:20:30.02:386,30,0	1/1:0,21:21:57.19:733,57,0	1/1:5,12:15:33.11:424,33,0	0/0:35,0:35:92.25:0,92,1444	1/1:2,15:17:39.13:495,39,0	1/1:3,22:25:66.21:848,66,0	1/1:0,12:12:27.09:347,27,0	1/1:6,12:18:36.12:463,36,0	1/1:5,19:24:63.20:807,63,0	1/1:1,8:9:18.06:232,18,0	0/0:18,0:18:30.09:0,30,480	1/1:3,13:16:39.13:500,39,0	0/1:9,0:9:25.91:26,0,78	1/1:3,2:5:2.94:72,3,0	1/1:3,8:11:24.08:309,24,0	1/1:4,21:24:66.21:837,66,0	1/1:7,9:16:21.07:270,21,0	1/1:7,6:13:27.09:345,27,0	1/1:5,17:22:39.13:502,39,0	1/1:3,9:12:17.89:231,18,0	1/1:3,18:21:51.16:655,51,0	1/1:5,17:22:51.14:639,51,0	1/1:6,14:20:39.12:501,39,0	1/1:1,6:7:18.06:231,18,0
chr10	26859802	.	G	GA	13693.33	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=11.690;DP=518;FS=4.067;HRun=0;HaplotypeScore=129.9762;InbreedingCoeff=0.9937;MQ=64.28;MQ0=4;MQRankSum=-2.308;QD=34.58;ReadPosRankSum=4.058;VQSLOD=4.3734;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:16,12:28:72.08:857,72,0	1/1:6,5:11:27.01:301,27,0	0/0:32,0:19:51.16:0,51,693	0/0:26,0:20:44.68:0,45,579	1/1:19,18:37:99:1210,110,0	1/1:8,7:15:42.09:545,42,0	1/1:6,10:16:48.02:566,48,0	0/0:28,0:28:81.23:0,81,1071	1/1:8,7:15:44.95:470,45,0	1/1:17,13:30:87.24:1234,87,0	1/1:11,6:17:47.94:564,48,0	1/1:9,3:12:33.07:430,33,0	1/1:8,10:18:53.88:549,54,0	1/1:6,7:13:36.02:423,36,0	0/0:14,0:14:42.13:0,42,570	1/1:10,4:14:34.23:458,34,0	0/0:22,0:22:60.16:0,60,812	1/1:21,6:27:78.18:994,78,0	1/1:7,3:9:27.08:378,27,0	1/1:10,12:21:62.01:652,62,0	1/1:14,4:18:51.12:683,51,0	1/1:8,3:11:33.01:397,33,0	1/1:13,6:19:57.08:750,57,0	1/1:6,2:8:15.01:186,15,0	1/1:7,8:15:42.05:514,42,0	1/1:11,7:18:54.16:752,54,0	1/1:9,6:15:43.90:535,44,0	1/1:7,0:7:18.06:246,18,0
chr10	26859805	.	AG	A	6908.15	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=11.805;DP=519;FS=3.517;HRun=6;HaplotypeScore=153.1994;InbreedingCoeff=0.9887;MQ=63.03;MQ0=4;MQRankSum=-0.688;QD=17.23;ReadPosRankSum=4.032;VQSLOD=3.3195;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:17,11:28:60.11:416,60,0	1/1:6,5:11:24.18:160,24,0	0/0:26,4:17:40.36:0,40,498	0/0:23,2:19:22.64:0,23,404	1/1:23,15:38:66.28:524,66,0	1/1:12,4:16:43.21:332,43,0	1/1:10,6:16:31.07:199,31,0	0/0:28,0:28:78.24:0,78,1002	1/1:7,8:15:38.78:258,39,0	1/1:22,9:31:78.92:702,79,0	1/1:12,6:18:44.07:337,44,0	1/1:11,1:12:25.39:197,25,0	1/1:8,10:18:41.47:262,41,0	1/1:8,5:13:32.78:231,33,0	0/0:14,0:14:42.14:0,42,552	1/1:10,4:14:37.11:264,37,0	0/0:21,0:21:51.10:0,51,636	1/1:21,4:25:63.66:485,64,0	1/1:7,3:9:26.72:236,27,0	1/1:12,10:21:39.62:271,40,0	1/1:16,1:17:37.93:311,38,0	1/1:9,3:12:29.39:224,29,0	1/1:16,3:19:44.32:358,44,0	1/1:6,2:8:13.55:107,14,0	1/1:11,6:17:38.53:281,39,0	1/1:14,5:19:46.81:397,47,0	1/1:10,5:15:27.30:236,27,0	1/1:7,0:7:14.90:120,15,0
chr10	26860299	.	CTG	C	16514.93	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=15.367;DP=551;FS=0.000;HRun=0;HaplotypeScore=173.4128;InbreedingCoeff=0.9832;MQ=78.15;MQ0=0;MQRankSum=-14.417;QD=38.50;ReadPosRankSum=3.906;VQSLOD=5.7108;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,26:27:72.07:997,72,0	1/1:0,18:18:54.11:775,54,0	0/0:28,0:28:78.21:0,78,1349	0/0:10,0:10:21.05:0,21,387	1/1:0,29:29:75.02:1014,75,0	1/1:0,27:27:75.25:1146,75,0	1/1:1,9:10:21.07:321,21,0	0/0:41,0:41:99:0,120,2188	1/1:0,16:16:48.16:734,48,0	1/1:2,14:16:39.03:528,39,0	1/1:1,21:22:54.14:798,54,0	1/1:0,19:19:54.14:799,54,0	1/1:1,25:26:72.24:1100,72,0	1/1:2,19:21:54.18:823,54,0	0/0:21,0:21:63.22:0,63,1207	1/1:0,25:25:66.19:983,66,0	0/0:22,0:22:63.18:0,63,1148	1/1:0,9:9:24.08:367,24,0	1/1:0,24:24:69.19:990,69,0	1/1:0,20:20:54.10:773,54,0	1/1:0,10:10:15.05:229,15,0	1/1:0,18:18:45.07:635,45,0	1/1:0,19:19:51.03:699,51,0	1/1:2,7:9:12.04:183,12,0	1/1:0,15:15:45.15:688,45,0	1/1:0,18:18:54.15:784,54,0	1/1:0,24:24:60.20:917,60,0	1/1:1,6:7:15.05:229,15,0
chr10	26862200	.	C	CAT	1817.78	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-8.447;DP=474;FS=2.085;HRun=0;HaplotypeScore=54.1930;InbreedingCoeff=0.8577;MQ=66.41;MQ0=1;MQRankSum=1.310;QD=29.32;ReadPosRankSum=-4.223;VQSLOD=3.2887;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:36.12:0,36,457	0/0:7,0:7:18.06:0,18,229	0/0:6,0:5:3.30:0,3,39	0/0:16,0:8:5.23:0,5,27	0/0:31,0:31:87.25:0,87,1080	0/0:15,0:15:39.12:0,39,496	0/0:12,0:12:33.09:0,33,405	1/1:15,30:45:65.72:1438,66,0	0/0:16,0:16:45.14:0,45,572	0/0:28,0:28:75.22:0,75,931	0/0:22,0:22:48.11:0,48,570	0/0:12,0:12:36.12:0,36,458	0/0:13,0:13:36.12:0,36,458	0/0:15,0:15:39.12:0,39,496	0/0:14,0:14:33.11:0,33,420	0/0:12,0:12:24.08:0,24,305	1/1:5,11:17:29.93:501,30,0	0/0:15,0:14:36.09:0,36,442	0/0:25,0:25:57.17:0,57,713	0/0:19,0:19:42.12:0,42,521	0/0:12,0:12:26.55:0,27,288	0/0:9,0:9:18.06:0,18,229	0/0:7,0:7:21.03:0,21,238	0/0:9,0:9:24.06:0,24,291	0/0:20,0:20:51.15:0,51,634	0/0:20,0:20:48.15:0,48,599	0/0:23,0:23:54.17:0,54,687	0/0:20,0:20:51.16:0,51,648
chr10	26864502	.	A	AT	8808.84	PASS	AB=1.000;AC=53;AF=0.946;AN=56;BaseQRankSum=-4.916;DP=294;FS=1.336;HRun=6;HaplotypeScore=29.2687;InbreedingCoeff=0.4778;MQ=78.72;MQ0=0;MQRankSum=-5.045;QD=30.69;ReadPosRankSum=3.178;VQSLOD=4.6296;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,12:12:33.11:415,33,0	1/1:1,6:7:15.05:189,15,0	0/0:7,0:6:15.03:0,15,150	0/1:10,0:9:1.23:1,0,64	1/1:2,20:22:57.18:717,57,0	1/1:2,13:15:36.12:453,36,0	1/1:0,3:3:6.02:75,6,0	1/1:6,17:23:51.15:629,51,0	1/1:0,11:11:30.10:377,30,0	1/1:1,15:16:45.13:554,45,0	1/1:1,10:11:30.10:375,30,0	1/1:1,1:2:3.01:38,3,0	1/1:1,3:4:6.02:75,6,0	1/1:0,9:9:24.08:302,24,0	1/1:0,8:8:24.08:302,24,0	1/1:0,3:3:6.02:75,6,0	1/1:1,14:15:42.13:528,42,0	1/1:1,12:13:36.11:451,36,0	1/1:6,15:21:48.15:602,48,0	1/1:0,15:15:45.10:548,45,0	1/1:1,7:8:21.07:264,21,0	1/1:0,1:1:3.01:38,3,0	1/1:1,3:4:6.02:76,6,0	1/1:0,1:1:3.01:38,3,0	1/1:0,15:15:36.12:453,36,0	1/1:2,12:14:36.10:440,36,0	1/1:1,18:19:51.16:641,51,0	1/1:1,4:5:12.04:151,12,0
chr10	26866491	.	GA	G	484.63	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.449;DP=489;FS=0.844;HRun=8;HaplotypeScore=47.7048;InbreedingCoeff=0.9590;MQ=67.16;MQ0=1;MQRankSum=-0.051;QD=22.03;ReadPosRankSum=0.961;VQSLOD=3.8917;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:28.33:0,28,325	0/0:8,0:8:21.06:0,21,254	0/0:10,0:9:17.96:0,18,177	0/0:17,1:14:24.91:0,25,358	0/0:29,0:29:69.21:0,69,834	0/0:17,0:17:48.10:0,48,553	0/0:18,0:18:48.12:0,48,555	0/0:31,0:31:81.24:0,81,967	0/0:20,0:20:57.17:0,57,689	0/0:19,0:19:57.17:0,57,688	0/0:21,0:21:54.17:0,54,652	0/0:23,0:23:66.20:0,66,796	0/0:18,0:18:45.13:0,45,534	0/0:11,0:11:33.10:0,33,398	1/1:0,22:22:60.10:579,60,0	0/0:13,0:13:30.09:0,30,362	0/0:15,0:15:45.14:0,45,543	0/0:10,0:10:27.08:0,27,322	0/0:16,0:16:36.11:0,36,434	0/0:31,0:31:81.24:0,81,969	0/0:7,0:7:18.06:0,18,217	0/0:21,0:21:51.16:0,51,616	0/0:26,0:26:78.23:0,78,932	0/0:7,0:7:15.05:0,15,181	0/0:12,0:12:33.09:0,33,388	0/0:25,0:25:66.20:0,66,797	0/0:19,0:19:57.17:0,57,688	0/0:9,0:9:24.03:0,24,274
chr10	26866879	.	T	TA	9662.83	PASS	AB=0.538;AC=51;AF=0.911;AN=56;BaseQRankSum=-4.776;DP=575;FS=13.470;HRun=12;HaplotypeScore=68.2315;InbreedingCoeff=0.6834;MQ=60.20;MQ0=1;MQRankSum=1.199;QD=17.44;ReadPosRankSum=3.500;VQSLOD=5.0528;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,22:30:28.16:453,28,0	1/1:2,6:8:8.97:78,9,0	0/0:12,0:9:8.86:0,9,95	0/0:9,0:7:8.73:0,9,56	1/1:8,27:35:65.95:608,66,0	1/1:4,15:20:24.22:373,24,0	1/1:2,10:15:29.86:273,30,0	1/1:12,23:36:70.11:631,70,0	1/1:4,12:16:27.04:263,27,0	1/1:9,20:31:38:506,38,0	1/1:2,23:27:62.72:573,63,0	1/1:1,11:14:35.73:320,36,0	1/1:4,19:26:42.49:412,42,0	1/1:2,12:17:38.57:335,39,0	1/1:9,0:23:26.77:139,27,0	1/1:9,14:24:19.58:307,20,0	1/1:2,13:17:41.74:379,42,0	1/1:4,10:14:14.14:295,14,0	1/1:4,13:18:1.08:314,1,0	1/1:6,26:34:71.74:661,72,0	1/1:1,5:6:15.02:146,15,0	1/1:5,13:20:44.59:385,45,0	1/1:3,11:15:14:284,14,0	1/1:7,6:14:20.87:189,21,0	1/1:3,18:22:47.91:452,48,0	1/1:8,13:23:40.86:401,41,0	0/1:4,23:28:0.22:474,0,0	1/1:6,14:20:43.62:413,44,0
chr10	26867093	.	AAAG	A	542.22	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.912;DP=646;FS=0.000;HRun=0;HaplotypeScore=90.4526;InbreedingCoeff=0.9984;MQ=62.83;MQ0=0;MQRankSum=0.167;QD=33.89;ReadPosRankSum=1.638;VQSLOD=4.2220;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:45.13:0,45,914	0/0:11,0:11:33.11:0,33,737	0/0:21,0:20:45.06:0,45,906	0/0:24,0:22:57.18:0,57,1053	0/0:31,0:31:90.31:0,90,2007	0/0:26,0:26:78.27:0,78,1725	0/0:13,0:14:36.02:0,36,738	0/0:33,0:33:90.31:0,90,1960	0/0:22,0:22:63.22:0,63,1405	0/0:45,0:45:99:0,129,2857	0/0:23,0:23:66.23:0,66,1457	0/0:21,0:21:54.19:0,54,1206	0/0:29,0:29:84.29:0,84,1856	0/0:24,0:24:72.25:0,72,1591	1/1:2,14:16:39.13:637,39,0	0/0:14,0:14:39.13:0,39,871	0/0:24,0:24:69.24:0,69,1504	0/0:22,0:22:60.21:0,60,1313	0/0:15,0:15:45.15:0,45,993	0/0:30,0:30:78.27:0,78,1727	0/0:9,0:9:27.09:0,27,586	0/0:23,0:23:66.23:0,66,1475	0/0:29,0:29:78.27:0,78,1714	0/0:21,0:21:60.21:0,60,1320	0/0:24,0:24:66.23:0,66,1474	0/0:25,0:25:75.26:0,75,1664	0/0:34,0:34:90.31:0,90,1955	0/0:19,0:19:57.19:0,57,1107
chr10	26867448	.	G	GATACA	4350.81	PASS	AB=0.548;AC=3;AF=0.054;AN=56;BaseQRankSum=-7.367;DP=691;FS=30.322;HRun=0;HaplotypeScore=119.3764;InbreedingCoeff=0.6496;MQ=64.71;MQ0=2;MQRankSum=-7.225;QD=71.32;ReadPosRankSum=-3.811;VQSLOD=3.2082;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:78.27:0,78,1680	0/0:8,0:8:24.08:0,24,535	0/0:25,0:24:57.16:0,57,1048	0/0:20,0:20:54.11:0,54,1028	0/0:26,0:26:72.25:0,72,1539	0/0:23,0:23:69.24:0,69,1516	0/0:15,0:15:42.14:0,42,910	1/1:13,27:41:99:3514,120,0	0/0:22,0:22:66.23:0,66,1472	0/0:39,0:39:99:0,114,2465	0/0:31,0:31:90.29:0,90,1951	0/0:16,0:16:45.15:0,45,953	0/0:28,0:28:84.29:0,84,1843	0/0:17,0:17:51.16:0,51,1095	0/0:29,0:29:87.27:0,87,1758	0/0:25,0:25:75.23:0,75,1566	0/1:3,11:17:20.69:837,0,21	0/0:10,0:10:30.10:0,30,660	0/0:23,0:23:60.21:0,60,1311	0/0:33,0:33:96.33:0,96,2096	0/0:38,0:38:99:0,111,2452	0/0:24,0:24:63.20:0,63,1335	0/0:23,0:23:69.24:0,69,1506	0/0:30,0:30:87.30:0,87,1830	0/0:26,0:26:72.25:0,72,1591	0/0:30,0:30:90.31:0,90,1981	0/0:31,0:30:84.27:0,84,1815	0/0:9,0:8:24.08:0,24,535
chr10	26867680	.	CCA	C	19166.86	PASS	AB=0.556;AC=45;AF=0.804;AN=56;BaseQRankSum=7.975;DP=575;FS=0.401;HRun=0;HaplotypeScore=76.4281;InbreedingCoeff=0.8845;MQ=61.95;MQ0=5;MQRankSum=2.757;QD=40.61;ReadPosRankSum=7.111;VQSLOD=6.0416;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,20:23:57.14:873,57,0	1/1:0,9:9:21.07:322,21,0	0/0:17,0:15:42.12:0,42,697	0/0:9,0:8:24.08:0,24,439	1/1:1,28:29:78.26:1193,78,0	1/1:0,21:21:63.21:965,63,0	1/1:1,14:15:39.13:597,39,0	0/0:36,0:36:99:0,105,1999	1/1:0,23:23:63.21:965,63,0	1/1:1,26:27:81.27:1232,81,0	1/1:3,19:21:33.42:803,33,0	1/1:1,12:13:33.11:505,33,0	1/1:0,19:18:51.17:781,51,0	1/1:0,20:19:51.17:781,51,0	0/0:24,0:24:72.25:0,72,1378	1/1:0,9:9:21.07:322,21,0	0/0:17,0:17:48.16:0,48,924	0/1:4,16:20:99:675,0,140	1/1:1,17:18:51.17:781,51,0	1/1:4,29:32:78.22:1159,78,0	1/1:0,21:21:54.18:827,54,0	1/1:0,19:19:51.17:781,51,0	1/1:0,30:30:87.30:1333,87,0	1/1:0,14:14:42.14:643,42,0	1/1:0,17:17:42.14:643,42,0	1/1:0,33:33:99:1516,99,0	1/1:0,23:23:66.22:1011,66,0	1/1:3,10:12:30.10:459,30,0
chr10	26872557	.	T	TA	15955.28	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-6.919;DP=536;FS=0.844;HRun=6;HaplotypeScore=48.1580;InbreedingCoeff=0.9531;MQ=82.61;MQ0=0;MQRankSum=-7.721;QD=31.41;ReadPosRankSum=3.909;VQSLOD=5.1135;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,10:11:27.09:340,27,0	1/1:3,5:8:15.05:189,15,0	0/0:21,0:21:40.78:0,41,456	0/0:7,0:7:15.03:0,15,153	1/1:2,22:24:66.13:795,66,0	1/1:0,23:23:51.16:642,51,0	1/1:2,23:25:66.21:830,66,0	1/1:6,27:33:78.23:967,78,0	1/1:0,20:20:51.16:642,51,0	1/1:2,18:20:48.14:591,48,0	1/1:2,12:14:33.11:415,33,0	1/1:0,20:20:57.18:717,57,0	1/1:3,25:28:72.23:904,72,0	1/1:1,23:24:57.17:703,57,0	1/1:2,17:19:51.14:627,51,0	1/1:4,23:27:60.18:755,60,0	1/1:4,9:13:27.09:340,27,0	1/1:0,13:13:39.12:491,39,0	1/1:0,20:20:57.18:717,57,0	1/1:1,25:26:72.22:895,72,0	1/1:0,17:17:45.14:566,45,0	1/1:2,17:19:51.12:624,51,0	1/1:1,11:12:27.09:340,27,0	1/1:1,13:14:33.11:415,33,0	1/1:0,21:21:57.18:717,57,0	1/1:2,25:27:63.20:792,63,0	1/1:2,23:25:66.21:830,66,0	1/1:1,4:5:9.03:113,9,0
chr10	26873683	.	AT	A	349.60	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.504;DP=471;FS=0.999;HRun=7;HaplotypeScore=43.3183;InbreedingCoeff=0.8328;MQ=70.15;MQ0=0;MQRankSum=0.796;QD=21.85;ReadPosRankSum=-0.631;VQSLOD=2.5491;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:30.10:0,30,377	0/0:9,0:9:27.09:0,27,340	0/0:9,0:9:24.03:0,24,270	0/0:5,0:4:2.80:0,3,13	0/0:16,0:16:39.12:0,39,491	0/0:26,0:26:72.22:0,72,892	0/0:11,0:11:33.08:0,33,399	0/0:30,0:30:75.22:0,75,911	0/0:16,0:16:42.13:0,42,525	0/0:30,0:30:84.25:0,84,1035	0/0:23,0:23:57.18:0,57,710	0/0:9,0:9:24.08:0,24,302	0/0:19,0:19:48.15:0,48,602	0/0:18,0:18:54.17:0,54,679	1/1:1,15:16:45:444,45,0	0/0:11,0:11:33.11:0,33,415	0/0:16,0:16:48.14:0,48,590	0/0:16,0:16:45.14:0,45,556	0/0:9,0:9:24.08:0,24,302	0/0:41,0:41:99:0,114,1429	0/0:11,0:11:27.09:0,27,339	0/0:8,0:8:24.07:0,24,290	0/0:20,0:20:48.13:0,48,576	0/0:7,0:7:21.05:0,21,250	0/0:20,0:20:51.16:0,51,642	0/0:26,0:26:60.18:0,60,741	0/0:32,0:32:90.28:0,90,1119	0/0:5,0:5:15.05:0,15,189
chr10	26875237	.	C	CT	1043.90	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-8.055;DP=563;FS=2.063;HRun=9;HaplotypeScore=61.2884;InbreedingCoeff=0.9914;MQ=74.24;MQ0=3;MQRankSum=1.042;QD=22.69;ReadPosRankSum=-2.407;VQSLOD=3.6974;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:38.96:0,39,338	0/0:7,0:7:21:0,21,182	0/0:28,0:23:23.10:0,23,246	0/0:26,0:23:28.50:0,29,262	0/0:36,0:36:80.95:0,81,699	0/0:25,0:25:65.97:0,66,572	0/0:13,0:13:35.99:0,36,312	1/1:8,20:29:62.98:668,63,0	0/0:20,0:20:53.99:0,54,469	0/0:26,0:26:59.96:0,60,518	0/0:21,0:21:59.97:0,60,517	0/0:11,0:11:32.98:0,33,282	0/0:20,0:20:53.85:0,54,458	0/0:16,0:16:35.98:0,36,312	0/0:19,0:19:56.97:0,57,491	0/0:20,0:20:53.97:0,54,465	1/1:1,16:17:45.12:498,45,0	0/0:8,0:8:21:0,21,182	0/0:23,0:23:59.96:0,60,515	0/0:36,1:37:50.66:0,51,654	0/0:7,0:7:21:0,21,182	0/0:15,0:15:41.99:0,42,364	0/0:21,0:21:53.98:0,54,469	0/0:17,0:17:47.98:0,48,416	0/0:24,0:24:62.97:0,63,547	0/0:24,0:24:56.96:0,57,491	0/0:25,0:25:62.97:0,63,547	0/0:12,0:12:29.97:0,30,260
chr10	26876018	.	T	TATC	3140.53	PASS	AB=0.896;AC=39;AF=0.813;AN=48;BaseQRankSum=-1.181;DP=398;FS=5.457;HRun=0;HaplotypeScore=68.7338;InbreedingCoeff=-0.0499;MQ=72.98;MQ0=5;MQRankSum=1.895;QD=10.33;ReadPosRankSum=0.959;VQSLOD=2.4590;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:13,2:15:12.14:49,0,12	1/1:5,0:5:6.02:113,6,0	./.	./.	1/1:16,0:16:6.01:81,6,0	0/1:22,0:22:8.38:390,0,8	0/1:18,1:19:23.41:147,0,23	./.	1/1:12,0:12:12.04:226,12,0	1/1:10,0:10:9.01:125,9,0	1/1:9,0:9:3:25,3,0	0/1:3,6:9:17.77:50,0,18	1/1:13,0:13:12.04:217,12,0	1/1:21,0:21:18.06:339,18,0	./.	1/1:22,0:21:21.07:286,21,0	0/0:5,0:10:5.77:0,6,34	0/1:12,0:12:17.39:292,0,17	1/1:11,0:11:6.02:110,6,0	1/1:11,0:11:9.03:169,9,0	0/1:13,2:16:0:0,0,0	1/1:12,0:12:6.02:101,6,0	1/1:5,3:8:3.01:56,3,0	1/1:11,10:21:12.01:182,12,0	1/1:11,0:11:6.02:99,6,0	0/1:9,0:9:29.42:96,0,29	1/1:12,6:18:3.01:56,3,0	1/1:2,0:2:3.01:56,3,0
chr10	26876076	.	TCACCACCACCACCACCACCAC	T	170.80	PASS	AC=10;AF=0.313;AN=32;BaseQRankSum=-1.528;DP=290;FS=0.000;HRun=0;HaplotypeScore=120.1846;InbreedingCoeff=0.3279;MQ=48.49;MQ0=24;MQRankSum=0.417;QD=3.22;ReadPosRankSum=1.898;VQSLOD=1.8966;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	0/0:6,0:6:0.89:0,1,2	0/0:14,0:14:3.28:0,3,10	1/1:12,0:12:2.99:24,3,0	./.	0/0:6,0:6:2.22:0,2,7	1/1:7,0:7:3.01:44,3,0	./.	0/0:7,0:7:0.89:0,1,2	./.	0/0:11,1:12:2.92:0,3,8	0/0:3,0:3:3.01:0,3,82	1/1:9,3:11:2.67:163,3,0	1/1:11,0:10:2.37:8,2,0	0/0:10,0:10:0.42:0,0,1	0/0:6,0:6:0:0,0,0	./.	1/1:11,0:10:1.95:22,2,0	./.	./.	0/0:14,0:14:1.36:0,1,4	0/0:3,0:4:1.82:0,2,5	./.	0/0:10,0:10:0.89:0,1,2	./.
chr10	26877083	.	A	AT	13921.94	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-12.986;DP=587;FS=1.979;HRun=8;HaplotypeScore=55.0593;InbreedingCoeff=0.9229;MQ=77.22;MQ0=1;MQRankSum=-0.883;QD=28.59;ReadPosRankSum=3.759;VQSLOD=5.2214;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,6:7:9.03:104,9,0	1/1:1,5:6:18.03:195,18,0	0/0:14,0:13:1.20:0,1,180	0/0:11,0:11:15.44:0,15,129	1/1:0,36:36:99:1166,105,0	1/1:3,19:22:51.15:589,51,0	1/1:1,15:16:39.12:450,39,0	0/0:29,0:29:70:0,70,568	1/1:0,12:12:36.11:416,36,0	1/1:4,28:32:84.14:951,84,0	1/1:1,28:29:81.10:901,81,0	1/1:3,11:14:33.10:381,33,0	1/1:4,19:23:42.12:485,42,0	1/1:2,19:21:51.15:589,51,0	0/0:25,0:25:75.02:0,75,678	1/1:2,15:17:36.11:415,36,0	0/0:21,0:20:60.03:0,60,548	1/1:1,7:8:15.04:173,15,0	1/1:5,20:25:63.14:703,63,0	1/1:4,27:31:73.58:879,74,0	1/1:3,12:15:36.11:415,36,0	1/1:4,17:21:51.11:574,51,0	1/1:1,29:30:78.19:885,78,0	1/1:1,13:14:30.09:346,30,0	1/1:2,26:28:72.21:831,72,0	1/1:0,24:24:72.02:791,72,0	1/1:1,38:40:80.69:1164,81,0	1/1:0,16:16:45.13:519,45,0
chr10	26877915	.	TACAC	T	2021.85	PASS	AB=0.904;AC=40;AF=0.800;AN=50;BaseQRankSum=0.971;DP=542;FS=8.408;HRun=0;HaplotypeScore=123.2340;InbreedingCoeff=0.3885;MQ=73.43;MQ0=9;MQRankSum=0.509;QD=5.55;ReadPosRankSum=2.412;VQSLOD=1.6958;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:29,2:31:23.99:79,0,24	1/1:4,3:7:6.01:74,6,0	./.	./.	1/1:10,3:13:6:70,6,0	1/1:17,2:18:12:140,12,0	1/1:22,2:25:6.01:73,6,0	0/0:29,0:28:3.63:0,4,10	0/0:20,0:20:3.01:0,3,54	1/1:15,1:16:3.01:46,3,0	1/1:18,2:19:6.02:92,6,0	1/1:9,4:13:12.04:183,12,0	1/1:13,0:13:3.01:42,3,0	1/1:8,6:14:9.03:138,9,0	0/0:14,0:14:12.04:0,12,216	1/1:11,6:16:8.07:136,8,0	0/0:22,0:22:23.90:0,24,390	1/1:14,3:16:11.63:155,12,0	1/1:8,2:10:6.02:92,6,0	0/1:17,3:20:0.80:82,0,1	./.	1/1:13,2:15:9.02:117,9,0	1/1:15,0:17:12:119,12,0	1/1:17,5:22:3.01:46,3,0	1/1:24,2:27:14.76:202,15,0	1/1:13,1:14:3:46,3,0	1/1:17,5:22:12.04:184,12,0	1/1:10,1:10:2.26:45,2,0
chr10	26878751	.	G	GTA	4870.15	PASS	AB=0.794;AC=46;AF=0.852;AN=54;BaseQRankSum=-6.114;DP=308;FS=5.235;HRun=0;HaplotypeScore=42.5221;InbreedingCoeff=0.4778;MQ=74.05;MQ0=4;MQRankSum=0.435;QD=20.81;ReadPosRankSum=5.009;VQSLOD=3.9562;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,9:13:17.94:270,18,0	1/1:0,4:5:12.03:177,12,0	0/0:13,0:8:8.83:0,9,85	0/1:24,0:14:5.72:6,0,9	1/1:3,7:11:15.05:231,15,0	0/1:9,21:30:16.47:280,0,16	1/1:1,1:2:3.01:50,3,0	0/0:45,0:45:90.23:0,90,1109	1/1:2,5:7:9.03:151,9,0	1/1:6,12:18:36.12:579,36,0	1/1:2,8:10:6.02:100,6,0	1/1:2,5:7:9.03:151,9,0	1/1:4,2:6:3.01:50,3,0	1/1:2,2:4:6.02:100,6,0	1/1:10,0:10:22.16:172,22,0	1/1:2,4:6:9.03:151,9,0	0/0:16,0:16:42.12:0,42,519	1/1:0,5:4:6.02:100,6,0	1/1:0,9:9:23.87:359,24,0	1/1:0,7:7:15.05:251,15,0	1/1:0,4:4:9.03:151,9,0	./.	1/1:5,4:9:12.04:201,12,0	1/1:0,2:2:3.01:50,3,0	1/1:3,6:8:12.04:188,12,0	1/1:3,11:14:33.11:552,33,0	1/1:2,14:15:30.10:501,30,0	1/1:1,4:5:3.01:50,3,0
chr10	26879031	.	GA	G	317.20	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.826;DP=456;FS=1.787;HRun=9;HaplotypeScore=46.4308;InbreedingCoeff=0.8177;MQ=72.33;MQ0=0;MQRankSum=0.625;QD=17.62;ReadPosRankSum=1.211;VQSLOD=3.4985;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:24.07:0,24,277	0/0:5,0:5:15.04:0,15,173	0/0:9,0:9:20.96:0,21,188	0/0:8,0:8:5.29:0,5,59	0/0:26,0:26:69.19:0,69,786	0/0:22,0:22:66.18:0,66,752	0/0:15,0:15:42.12:0,42,484	0/0:28,2:30:14.26:0,14,664	0/0:11,0:11:30.08:0,30,337	0/0:21,0:21:54.16:0,54,623	0/0:15,0:15:45.12:0,45,511	0/0:20,0:21:63.02:0,63,707	0/0:17,1:18:23.66:0,24,508	0/0:23,0:23:66.20:0,66,762	1/1:0,18:18:45.02:412,45,0	0/0:20,1:22:29.53:0,30,556	0/0:20,0:20:57.17:0,57,653	0/0:9,0:9:24.03:0,24,262	0/0:18,1:20:32.56:0,33,597	0/0:19,0:20:60:0,60,664	0/0:9,0:9:27.08:0,27,312	0/0:11,0:11:30.08:0,30,337	0/0:12,0:12:33.10:0,33,380	0/0:12,0:12:36.11:0,36,415	0/0:14,0:14:39.12:0,39,450	0/0:24,0:24:63.19:0,63,725	0/0:19,0:19:45.13:0,45,519	0/0:13,0:13:9.50:0,9,299
chr10	26879735	.	T	TTTATTGG	2181.10	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.822;DP=470;FS=0.000;HRun=0;HaplotypeScore=102.4589;InbreedingCoeff=0.8642;MQ=60.22;MQ0=8;MQRankSum=-6.323;QD=90.88;ReadPosRankSum=1.626;VQSLOD=4.4356;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:81.24:0,81,2024	0/0:12,0:12:36.12:0,36,914	0/0:5,0:5:12.04:0,12,282	0/0:10,0:4:5.27:0,5,194	0/0:21,0:21:32.51:0,33,1238	0/0:9,0:9:27.09:0,27,712	0/0:19,0:19:51.17:0,51,1279	0/0:32,0:28:81.23:0,81,2003	0/0:15,0:15:42.14:0,42,1045	0/0:18,0:18:54.19:0,54,1379	0/0:22,0:22:66.21:0,66,1493	0/0:16,0:16:45.15:0,45,1134	0/0:15,0:15:39.13:0,39,960	0/0:14,0:14:42.14:0,42,1053	1/1:2,21:24:57.19:2276,57,0	0/0:19,0:19:54.18:0,54,1336	0/0:21,0:21:60.21:0,60,1500	0/0:9,0:9:27.09:0,27,708	0/0:21,0:20:48.16:0,48,1173	0/0:18,0:18:48.16:0,48,1219	0/0:10,0:10:30.10:0,30,789	0/0:11,0:10:30.10:0,30,716	0/0:12,0:12:36.11:0,36,833	0/0:10,0:10:24.07:0,24,576	0/0:13,0:13:36.12:0,36,949	0/0:26,0:26:75.25:0,75,1888	0/0:25,0:25:75.26:0,75,1944	0/0:16,0:15:45.15:0,45,1168
chr10	26879999	.	C	CTT	1701.67	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=8.235;DP=689;FS=0.674;HRun=1;HaplotypeScore=85.4427;InbreedingCoeff=0.9852;MQ=66.29;MQ0=0;MQRankSum=0.025;QD=45.99;ReadPosRankSum=1.603;VQSLOD=3.7432;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,132,1952	0/0:7,0:7:18.05:0,18,254	0/0:11,0:11:27.09:0,27,412	0/0:17,0:17:51.06:0,51,726	0/0:24,0:23:66.21:0,66,985	0/0:28,0:28:84.25:0,84,1241	0/0:23,0:23:60.20:0,60,918	0/0:30,0:30:90.28:0,90,1320	0/0:27,0:27:81.26:0,81,1219	0/0:34,0:34:96.32:0,96,1451	0/0:19,0:19:51.17:0,51,780	0/0:27,0:27:78.25:0,78,1172	0/0:26,0:26:75.25:0,75,1147	0/0:32,0:32:90.24:0,90,1288	1/1:2,35:37:93.22:1797,93,0	0/0:34,0:34:99:0,99,1515	0/0:37,0:37:99:0,105,1539	0/0:22,0:22:21.35:0,21,873	0/0:16,0:16:48.15:0,48,715	0/0:12,0:12:36.12:0,36,549	0/0:48,0:48:99:0,138,2086	0/0:13,0:13:39.11:0,39,554	0/0:18,0:18:54.18:0,54,826	0/0:17,0:17:45.11:0,45,663	0/0:21,0:21:63.21:0,63,964	0/0:31,0:31:90.31:0,90,1378	0/0:26,0:26:78.03:0,78,1137	0/0:8,0:8:24.05:0,24,343
chr10	26881083	.	CATA	C	1828.22	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.028;DP=476;FS=7.951;HRun=0;HaplotypeScore=64.9085;InbreedingCoeff=0.8945;MQ=65.04;MQ0=0;MQRankSum=1.165;QD=29.49;ReadPosRankSum=-0.140;VQSLOD=3.1999;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:51.16:0,51,1015	0/0:8,0:8:21.07:0,21,415	0/0:9,0:9:7.48:0,7,222	0/0:3,0:3:3.01:0,3,62	0/0:29,0:29:75.26:0,75,1528	0/0:15,0:15:42.14:0,42,859	0/0:11,0:11:24.07:0,24,459	1/1:6,16:22:48.12:653,48,0	0/0:15,0:15:42.14:0,42,857	0/0:17,0:17:42.14:0,42,855	0/0:37,0:37:81.28:0,81,1656	0/0:10,0:10:24.08:0,24,496	0/0:24,0:24:57.20:0,57,1176	0/0:16,0:16:48.16:0,48,991	1/1:3,16:19:48.16:703,48,0	0/0:13,0:13:30.10:0,30,619	1/1:5,16:21:42.14:615,42,0	0/0:7,0:7:18.04:0,18,333	0/0:14,0:14:30.10:0,30,620	0/0:27,0:27:66.23:0,66,1362	0/0:16,0:16:42.13:0,42,791	0/0:8,0:8:12.04:0,12,247	0/0:20,0:20:48.16:0,48,966	0/0:6,0:6:15.05:0,15,296	0/0:23,0:22:57.20:0,57,1167	0/0:26,0:26:60.20:0,60,1205	0/0:31,0:29:78.27:0,78,1595	0/0:11,0:11:21.07:0,21,433
chr10	26881336	.	A	ATCTCTC	5130.02	PASS	AB=0.967;AC=47;AF=0.904;AN=52;BaseQRankSum=-0.540;DP=633;FS=0.000;HRun=0;HaplotypeScore=174.6487;InbreedingCoeff=0.2482;MQ=68.52;MQ0=8;MQRankSum=-0.942;QD=8.77;ReadPosRankSum=-1.721;VQSLOD=3.7232;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:26,1:26:7.27:162,7,0	1/1:13,0:13:2.92:87,3,0	0/1:31,0:22:0:0,0,0	0/1:39,0:20:0:0,0,0	1/1:24,0:24:3.01:44,3,0	1/1:33,0:34:9.03:186,9,0	1/1:14,0:14:6.02:130,6,0	1/1:51,0:51:45.76:497,46,0	1/1:26,1:29:14.91:351,15,0	1/1:29,1:30:21.05:435,21,0	1/1:25,0:23:6.02:113,6,0	1/1:14,0:15:3.01:59,3,0	1/1:20,0:20:12.02:189,12,0	1/1:20,0:21:11.98:215,12,0	1/1:22,0:20:6:62,6,0	1/1:12,1:19:12.02:152,12,0	1/1:15,0:15:2.88:15,3,0	0/1:8,0:9:0.81:79,0,1	1/1:9,0:9:9.03:215,9,0	1/1:21,0:20:18.04:317,18,0	0/0:14,0:13:2.99:0,3,24	1/1:17,0:17:5.55:122,6,0	./.	1/1:18,0:17:2.55:73,3,0	1/1:28,0:29:9.03:223,9,0	1/1:27,1:28:51.23:1116,51,0	1/1:19,0:20:12.04:288,12,0	./.
chr10	26881386	.	GTA	G	2593.24	PASS	AB=0.992;AC=44;AF=0.815;AN=54;BaseQRankSum=1.745;DP=509;FS=7.956;HRun=0;HaplotypeScore=125.8871;InbreedingCoeff=0.2252;MQ=50.42;MQ0=24;MQRankSum=2.238;QD=5.72;ReadPosRankSum=5.059;VQSLOD=2.0187;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:15:22.71:121,23,0	1/1:11,0:11:21.89:99,22,0	0/0:32,0:16:48.08:0,48,728	0/0:22,0:9:24.08:0,24,399	1/1:24,1:25:34.57:219,35,0	1/1:25,1:26:29.78:187,30,0	1/1:8,0:7:11.10:53,11,0	0/1:37,0:31:44.34:115,0,44	0/1:18,1:19:41.49:79,0,41	0/1:18,0:18:1.23:89,0,1	1/1:27,0:24:27.76:148,28,0	1/1:14,0:14:8.62:81,9,0	1/1:14,1:15:33.14:149,33,0	1/1:13,0:12:9.13:75,9,0	0/1:18,0:16:14.41:17,0,14	1/1:18,0:18:18.79:82,19,0	1/1:11,0:9:10.82:60,11,0	1/1:8,0:8:0.16:41,0,0	0/1:9,0:8:25.98:33,0,26	1/1:21,0:18:35.40:174,35,0	1/1:10,0:7:14.18:76,14,0	1/1:19,0:18:25.08:142,25,0	1/1:24,0:21:35.40:161,35,0	1/1:10,1:10:10.78:47,11,0	1/1:18,0:18:9.91:68,10,0	0/1:28,0:27:32.98:124,0,33	1/1:27,0:27:50.54:310,51,0	./.
chr10	26881388	.	ATG	A	8200.58	PASS	AB=0.662;AC=45;AF=0.833;AN=54;BaseQRankSum=-2.543;DP=505;FS=4.226;HRun=0;HaplotypeScore=105.9683;InbreedingCoeff=0.5893;MQ=50.82;MQ0=24;MQRankSum=0.933;QD=19.07;ReadPosRankSum=6.121;VQSLOD=4.7261;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:11,10:18:42.22:223,0,42	1/1:3,8:11:21.04:255,21,0	0/0:32,0:16:44.31:0,44,630	0/0:22,0:9:23.75:0,24,345	1/1:3,22:25:47.49:556,47,0	1/1:7,18:25:39.12:468,39,0	1/1:3,5:7:12.04:146,12,0	1/1:12,21:27:57.16:680,57,0	0/1:9,9:18:3.69:205,0,4	1/1:5,14:19:28.55:391,29,0	1/1:11,16:24:41.96:486,42,0	1/1:4,10:14:10.52:275,11,0	1/1:2,12:14:35.96:436,36,0	1/1:7,6:12:15.05:182,15,0	0/0:19,0:17:17.75:0,18,107	1/1:9,9:18:15.04:182,15,0	1/1:5,6:9:11.55:145,12,0	1/1:3,5:8:12.02:145,12,0	0/1:4,5:8:8.34:131,0,8	1/1:6,16:19:39.12:470,39,0	1/1:2,8:7:15.05:182,15,0	1/1:2,16:18:38.83:451,39,0	1/1:6,17:20:38.64:446,39,0	1/1:2,9:10:12.04:146,12,0	1/1:6,12:18:20.90:232,21,0	1/1:8,18:25:11.36:597,11,0	1/1:2,25:27:65.69:773,66,0	./.
chr10	26883987	.	T	TG	1632.16	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=5.721;DP=537;FS=4.597;HRun=5;HaplotypeScore=55.7131;InbreedingCoeff=0.9369;MQ=84.86;MQ0=0;MQRankSum=-0.827;QD=24.73;ReadPosRankSum=-0.013;VQSLOD=2.3771;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:75.16:0,75,796	0/0:10,0:10:30.07:0,30,320	0/0:23,0:23:63.15:0,63,672	0/0:24,0:23:54.57:0,55,560	0/0:24,0:24:66.15:0,66,701	0/0:24,0:24:66.17:0,66,709	0/0:28,0:28:78.17:0,78,829	1/1:10,11:21:27.09:354,27,0	0/0:22,0:22:63.16:0,63,677	0/0:14,0:14:36.09:0,36,387	0/0:9,0:9:27.07:0,27,290	0/0:15,0:15:42.09:0,42,443	0/0:34,0:34:90.20:0,90,958	0/0:19,0:19:48.11:0,48,512	1/1:1,20:21:54.03:710,54,0	0/0:19,0:18:54.14:0,54,580	1/1:4,20:23:54.18:711,54,0	0/0:11,0:11:30.06:0,30,322	0/0:15,0:15:39.10:0,39,419	0/0:24,0:24:63.16:0,63,676	0/0:19,0:19:51.13:0,51,548	0/0:24,0:24:66.17:0,66,709	0/0:14,0:14:42.11:0,42,451	0/0:6,0:6:18.05:0,18,193	0/0:13,0:13:39.09:0,39,412	0/0:26,0:26:72.18:0,72,774	0/0:26,0:26:75.16:0,75,790	0/0:1,0:1:3.01:0,3,32
chr10	26885671	.	G	GA	328.62	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.778;DP=389;FS=4.954;HRun=1;HaplotypeScore=92.5297;InbreedingCoeff=0.7587;MQ=89.33;MQ0=2;MQRankSum=-1.668;QD=16.43;ReadPosRankSum=2.921;VQSLOD=4.0946;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:8:15.01:0,15,187	0/0:2,0:2:6.02:0,6,84	0/0:31,0:29:80.04:0,80,922	0/0:30,0:28:48.06:0,48,715	0/0:15,0:15:36.04:0,36,502	0/0:18,0:18:50.97:0,51,648	0/0:15,0:15:42.11:0,42,524	0/0:17,0:17:32.54:0,33,361	0/0:14,0:14:42.10:0,42,523	0/0:12,0:12:30.07:0,30,350	0/0:16,0:16:33.83:0,34,478	0/0:12,0:12:30.05:0,30,365	0/0:10,0:10:27:0,27,352	0/0:16,0:16:47.98:0,48,529	1/1:2,18:20:47.88:423,48,0	0/0:15,0:15:42.09:0,42,508	0/0:10,0:10:17.91:0,18,286	0/0:3,0:3:9.01:0,9,106	0/0:12,0:12:30.06:0,30,347	0/0:16,0:16:47.72:0,48,604	0/0:18,0:18:48.61:0,49,625	0/0:12,0:12:33.08:0,33,416	0/0:5,0:5:15.04:0,15,187	0/0:19,0:19:54.11:0,54,678	0/0:9,0:9:27.08:0,27,353	0/0:14,0:14:39.06:0,39,485	0/0:17,0:17:51.11:0,51,635	0/0:3,0:3:6.02:0,6,77
chr10	26885675	.	G	GA	326.63	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.590;DP=390;FS=14.762;HRun=0;HaplotypeScore=82.0093;InbreedingCoeff=0.8251;MQ=86.19;MQ0=2;MQRankSum=-1.521;QD=17.19;ReadPosRankSum=2.238;VQSLOD=4.5772;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:16.88:0,17,212	0/0:2,0:2:6.02:0,6,84	0/0:30,0:28:76.73:0,77,898	0/0:31,0:29:68.34:0,68,836	0/0:15,0:15:39.12:0,39,518	0/0:15,0:15:42.14:0,42,586	0/0:18,0:18:51.06:0,51,601	0/0:17,0:17:47.83:0,48,465	0/0:14,0:14:42.12:0,42,554	0/0:12,0:12:36.03:0,36,386	0/0:15,0:15:30.83:0,31,460	0/0:12,0:12:35.97:0,36,404	0/0:10,0:10:27.06:0,27,357	0/0:15,0:15:45.06:0,45,527	1/1:4,15:19:53.26:421,53,0	0/0:16,0:16:45.10:0,45,548	0/0:9,0:9:25.28:0,25,292	0/0:3,0:3:9:0,9,106	0/0:13,0:13:38.59:0,39,418	0/0:17,0:17:48.03:0,48,613	0/0:19,0:19:51.62:0,52,680	0/0:10,0:10:30.08:0,30,387	0/0:6,0:6:15.04:0,15,194	0/0:19,0:19:54.13:0,54,686	0/0:11,0:11:30.04:0,30,379	0/0:12,0:12:33.10:0,33,446	0/0:16,0:16:48.11:0,48,617	0/0:5,0:5:14.99:0,15,154
chr10	26886078	.	T	TAAA	6024.05	PASS	AB=0.619;AC=51;AF=0.911;AN=56;BaseQRankSum=-1.359;DP=485;FS=7.492;HRun=14;HaplotypeScore=91.9355;InbreedingCoeff=0.3885;MQ=67.73;MQ0=1;MQRankSum=-2.514;QD=13.27;ReadPosRankSum=-2.833;VQSLOD=2.2182;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,7:12:16.09:159,16,0	1/1:1,4:5:6.02:105,6,0	0/0:19,0:14:0.66:0,1,54	0/0:10,0:9:2.98:0,3,64	1/1:8,16:31:38.17:554,38,0	1/1:8,5:15:9.03:126,9,0	1/1:4,6:12:9.03:141,9,0	1/1:10,0:23:0.41:34,0,0	1/1:11,14:28:21.01:283,21,0	1/1:15,1:24:28.55:299,29,0	1/1:9,14:26:13.24:435,13,0	1/1:14,0:14:32.97:391,33,0	1/1:5,6:15:11.99:148,12,0	1/1:19,1:20:12.02:161,12,0	1/1:19,1:21:48:538,48,0	1/1:3,0:12:10.25:119,10,0	0/1:5,0:13:2.69:3,0,15	1/1:1,2:3:3.01:52,3,0	1/1:12,1:14:27.61:321,28,0	1/1:4,1:25:22.90:423,23,0	1/1:1,1:9:5.50:57,6,0	1/1:8,7:17:26.98:366,27,0	1/1:8,4:25:28.96:299,29,0	1/1:4,11:16:5.97:71,6,0	1/1:10,7:21:19.61:265,20,0	1/1:11,3:22:29.95:327,30,0	1/1:6,11:20:18.94:253,19,0	1/1:1,4:9:6.02:95,6,0
chr10	26886086	.	A	AAAA	5001.42	PASS	AB=1.000;AC=50;AF=0.893;AN=56;BaseQRankSum=-4.072;DP=466;FS=12.675;HRun=7;HaplotypeScore=58.5813;InbreedingCoeff=0.3325;MQ=68.44;MQ0=1;MQRankSum=-1.857;QD=11.50;ReadPosRankSum=-3.402;VQSLOD=0.0672;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:11:12.29:120,12,0	1/1:5,0:5:6.02:105,6,0	0/0:19,0:12:0.66:0,1,54	0/0:12,0:10:2.91:0,3,64	1/1:30,0:29:37.29:551,37,0	1/1:12,0:12:6.02:90,6,0	1/1:13,0:13:9.03:141,9,0	0/1:21,0:21:0.07:32,0,0	1/1:22,0:22:15.05:228,15,0	1/1:25,0:25:25.54:262,26,0	1/1:24,0:24:10.28:416,10,0	1/1:15,0:15:29.96:350,30,0	1/1:12,0:12:11.99:148,12,0	1/1:6,11:18:9.01:125,9,0	1/1:22,0:21:45.05:519,45,0	1/1:13,0:13:10.25:119,10,0	0/1:13,0:13:2.80:3,0,15	1/1:4,0:4:3.01:52,3,0	1/1:16,0:16:18.61:210,19,0	1/1:23,0:23:22.90:423,23,0	1/1:11,0:11:5.97:59,6,0	1/1:15,0:15:17.95:224,18,0	1/1:27,0:27:20.87:205,21,0	1/1:16,0:16:3.01:52,3,0	1/1:22,0:22:7.57:93,8,0	1/1:16,0:16:23.93:239,24,0	1/1:20,0:20:9.92:144,10,0	1/1:9,0:9:6.02:95,6,0
chr10	26886177	.	CT	C	374.32	PASS	AB=0.929;AC=6;AF=0.107;AN=56;BaseQRankSum=6.178;DP=410;FS=2.237;HRun=11;HaplotypeScore=48.5715;InbreedingCoeff=0.5405;MQ=71.77;MQ0=0;MQRankSum=-0.201;QD=8.51;ReadPosRankSum=-1.581;VQSLOD=1.6105;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:10,1:11:4.92:0,5,233	0/0:9,0:9:24.06:0,24,256	0/1:7,0:7:9.50:9,0,88	0/0:9,0:9:9.49:0,9,97	0/0:16,0:16:45.11:0,45,480	0/0:20,2:22:13.83:0,14,541	0/0:9,0:9:21.05:0,21,224	1/1:4,16:22:20.95:362,21,0	0/0:14,1:16:17.24:0,17,354	0/0:20,0:20:48.11:0,48,501	0/0:28,0:28:69.15:0,69,720	0/0:12,1:13:11.51:0,12,314	0/0:14,1:15:20.43:0,20,404	0/0:12,2:14:11.45:0,11,327	0/0:1,0:14:8.47:0,8,42	0/0:13,0:13:27.07:0,27,288	1/1:4,5:9:14.98:123,15,0	0/0:12,0:12:11.65:0,12,142	0/0:7,0:7:12.02:0,12,121	0/0:19,2:21:10.87:0,11,527	0/0:10,0:10:27.05:0,27,280	0/1:5,1:6:6.60:7,0,142	0/0:25,0:26:54.43:0,54,551	0/0:8,0:8:21.05:0,21,223	0/0:21,1:22:23.47:0,23,449	0/0:21,1:22:32.51:0,33,551	0/0:19,1:20:23.90:0,24,438	0/0:9,0:9:18.01:0,18,181
chr10	26886663	.	AT	A	252.95	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.300;DP=403;FS=1.080;HRun=8;HaplotypeScore=38.4648;InbreedingCoeff=0.9128;MQ=74.98;MQ0=0;MQRankSum=1.904;QD=16.86;ReadPosRankSum=0.748;VQSLOD=2.9795;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:54.17:0,54,652	0/0:8,0:8:18.06:0,18,217	0/0:11,0:11:21.04:0,21,228	0/0:8,0:8:9.20:0,9,201	0/0:25,0:25:69.21:0,69,832	0/0:24,0:24:72.21:0,72,860	0/0:7,0:7:21.06:0,21,254	0/0:25,0:25:66.20:0,66,797	0/0:12,0:12:27.08:0,27,326	0/0:21,0:21:54.17:0,54,652	0/0:10,0:10:27.08:0,27,326	0/0:10,0:10:27.08:0,27,326	0/0:16,0:16:45.14:0,45,544	0/0:11,0:11:30.09:0,30,361	1/1:0,15:15:36.06:348,36,0	0/0:7,0:7:18.06:0,18,217	0/0:19,0:19:39.12:0,39,471	0/0:11,0:11:30.08:0,30,350	0/0:20,0:21:38.97:0,39,431	0/0:11,0:11:30.09:0,30,362	0/0:19,0:19:57.16:0,57,673	0/0:7,0:7:21.06:0,21,254	0/0:8,0:8:24.06:0,24,278	0/0:9,0:9:21.06:0,21,254	0/0:15,0:15:39.12:0,39,471	0/0:26,0:26:72.21:0,72,857	0/0:17,0:17:51.12:0,51,591	0/0:12,0:12:36.11:0,36,435
chr10	26886734	.	TTG	T	325.16	PASS	AB=0.954;AC=19;AF=0.365;AN=52;BaseQRankSum=1.881;DP=476;FS=18.207;HRun=0;HaplotypeScore=69.5577;InbreedingCoeff=-0.2837;MQ=65.08;MQ0=15;MQRankSum=1.159;QD=1.16;ReadPosRankSum=2.372;VQSLOD=0.1542;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:27:51.65:52,0,270	0/0:7,0:6:5.61:0,6,54	./.	./.	0/1:22,3:25:31.81:32,0,271	0/0:22,0:22:15:0,15,160	0/1:15,0:15:14.97:15,0,173	0/0:26,0:24:5.95:0,6,42	0/1:11,1:12:31.56:32,0,72	0/0:18,0:19:2.36:0,2,110	0/0:13,0:12:5.71:0,6,157	0/0:10,0:10:12.04:0,12,170	0/1:14,0:14:40.11:40,0,93	0/1:10,0:10:13.83:14,0,58	1/1:20,0:19:14.32:75,14,0	0/0:7,0:7:9.01:0,9,112	0/0:21,0:18:21.03:0,21,268	0/1:13,1:14:17.46:17,0,105	1/1:11,0:11:2.90:16,3,0	0/1:11,0:11:0.38:0,0,49	0/1:25,0:25:5.28:5,0,184	0/1:15,0:18:87.36:87,0,209	0/1:22,0:21:18.11:18,0,196	0/1:8,1:9:29.41:29,0,77	0/0:18,6:24:6.38:0,6,410	0/1:25,0:23:1.23:1,0,191	0/1:8,0:8:5.94:6,0,74	0/1:10,1:12:31.51:32,0,81
chr10	26886773	.	TGTGTGTGC	T	663.14	PASS	AB=1.000;AC=6;AF=0.111;AN=54;BaseQRankSum=3.179;DP=442;FS=4.795;HRun=0;HaplotypeScore=118.3109;InbreedingCoeff=0.4625;MQ=53.85;MQ0=20;MQRankSum=-3.084;QD=8.96;ReadPosRankSum=-1.325;VQSLOD=1.7640;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:32:65.46:0,65,1593	0/0:6,0:5:11.95:0,12,259	1/1:15,0:2:1.92:19,2,0	./.	0/0:27,0:27:65.75:0,66,1574	0/0:21,0:21:45.41:0,45,943	0/0:18,0:17:35.07:0,35,825	0/1:20,0:18:99:238,0,178	0/0:12,0:11:27.45:0,27,590	0/0:15,0:15:42:0,42,761	0/0:16,0:14:29.97:0,30,723	0/0:14,0:14:29.95:0,30,658	0/0:14,0:14:35.48:0,35,688	0/0:13,0:13:38.81:0,39,648	1/1:2,15:16:15.05:412,15,0	0/0:12,0:12:32.97:0,33,612	0/1:22,0:21:99:115,0,698	0/0:11,0:11:4.40:0,4,513	0/0:3,0:3:8.98:0,9,104	0/0:15,0:15:38.83:0,39,677	0/0:19,0:19:44.98:0,45,1003	0/0:18,0:18:48.10:0,48,1242	0/0:22,0:20:47.93:0,48,1104	0/0:9,0:9:24:0,24,528	0/0:24,0:24:54.05:0,54,1645	0/0:17,0:15:42.80:0,43,911	0/0:9,0:9:24.99:0,25,522	0/0:7,0:7:21:0,21,518
chr10	26887135	.	GTAGATAGA	G	2987.55	PASS	AB=1.000;AC=40;AF=0.833;AN=48;BaseQRankSum=-3.496;DP=390;FS=6.867;HRun=0;HaplotypeScore=124.9680;InbreedingCoeff=0.3347;MQ=52.21;MQ0=11;MQRankSum=2.207;QD=9.58;ReadPosRankSum=-1.572;VQSLOD=1.7637;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:26:37.28:37,0,46	./.	./.	./.	1/1:19,0:18:12.04:231,12,0	1/1:16,0:16:11.95:190,12,0	1/1:17,0:14:0.47:1,0,0	0/0:29,0:27:2.70:0,3,7	1/1:14,0:14:18.06:285,18,0	1/1:16,0:16:18.06:397,18,0	1/1:16,0:16:11.92:144,12,0	1/1:13,0:13:11.78:204,12,0	1/1:14,0:14:12.42:214,12,0	1/1:13,0:13:11.87:183,12,0	0/1:18,0:18:28.53:62,0,29	1/1:13,0:13:15.05:252,15,0	0/0:7,0:11:14.73:0,15,125	0/0:12,0:12:5.05:0,5,47	1/1:9,0:9:3.01:66,3,0	1/1:12,7:18:8.71:64,9,0	1/1:13,0:13:6.02:118,6,0	1/1:15,0:14:3.01:48,3,0	1/1:10,0:9:2.68:48,3,0	1/1:8,0:8:6.02:119,6,0	1/1:7,0:7:6.02:92,6,0	1/1:18,0:18:7.80:220,8,0	1/1:18,0:18:2.33:144,2,0	./.
chr10	26890629	.	A	AAAT	3712.89	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=1.711;DP=546;FS=1.066;HRun=0;HaplotypeScore=73.1935;InbreedingCoeff=0.9913;MQ=73.01;MQ0=0;MQRankSum=-6.321;QD=55.42;ReadPosRankSum=-3.337;VQSLOD=4.4178;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:8:18.06:0,18,297	0/0:13,0:13:36.11:0,36,570	0/0:10,0:10:27.09:0,27,413	0/0:8,0:8:18.03:0,18,264	0/0:36,0:36:99:0,102,1654	0/0:29,0:29:87.29:0,87,1409	0/0:11,0:11:27.09:0,27,445	1/1:7,29:37:99:2182,108,0	0/0:22,0:22:60.20:0,60,966	0/0:24,0:24:69.24:0,69,1133	0/0:19,0:19:54.18:0,54,886	0/0:19,0:19:51.17:0,51,810	0/0:19,0:19:51.15:0,51,790	0/0:18,0:18:54.18:0,54,878	1/1:1,14:15:39.13:860,39,0	0/0:10,0:10:30.10:0,30,493	1/1:2,13:15:30.10:671,30,0	0/0:16,0:16:45.12:0,45,713	0/0:16,0:16:48.16:0,48,789	0/0:29,0:29:87.29:0,87,1412	0/0:9,0:9:27.08:0,27,400	0/0:20,0:20:57.17:0,57,867	0/0:33,0:33:99:0,99,1580	0/0:7,0:7:21.07:0,21,346	0/0:28,0:28:81.28:0,81,1331	0/0:25,0:25:69.23:0,69,1112	0/0:35,0:34:99:0,102,1676	0/0:15,0:15:45.15:0,45,731
chr10	26892095	.	TAC	T	593.15	PASS	AC=24;AF=0.857;AN=28;BaseQRankSum=-2.123;DP=89;FS=0.000;HRun=0;HaplotypeScore=22.1617;InbreedingCoeff=0.3756;MQ=68.50;MQ0=4;MQRankSum=-2.473;QD=14.12;ReadPosRankSum=0.284;VQSLOD=2.9938;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,0:2:2.96:19,3,0	1/1:1,0:1:2.98:22,3,0	0/0:10,0:7:13.63:0,14,94	0/0:9,0:3:2.53:0,3,21	1/1:4,0:4:8.99:75,9,0	./.	./.	1/1:3,6:9:17.96:148,18,0	./.	1/1:1,0:1:3:26,3,0	./.	./.	./.	./.	./.	./.	1/1:3,0:3:2.96:19,3,0	1/1:8,0:8:20.87:154,21,0	1/1:4,0:2:5.99:51,6,0	./.	./.	./.	1/1:2,0:2:3:25,3,0	./.	1/1:3,0:3:9:77,9,0	1/1:0,2:2:6:54,6,0	1/1:3,0:3:2.99:24,3,0	./.
chr10	26892153	.	GTCTCTC	G	234.73	PASS	AB=0.864;AC=18;AF=0.474;AN=38;BaseQRankSum=0.250;DP=193;FS=3.802;HRun=0;HaplotypeScore=46.2898;InbreedingCoeff=0.2394;MQ=55.80;MQ0=27;MQRankSum=0.693;QD=4.60;ReadPosRankSum=0.971;VQSLOD=0.8875;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:7:3.01:0,3,43	0/0:2,0:2:3.01:0,3,41	./.	./.	./.	0/0:3,0:2:2.88:0,3,15	1/1:4,0:3:3.01:57,3,0	./.	1/1:2,0:2:3.01:42,3,0	./.	1/1:7,0:7:1.81:5,2,0	./.	1/1:2,0:1:3.01:32,3,0	0/0:3,0:2:2.98:0,3,21	0/0:10,0:11:2.41:0,2,48	1/1:2,0:1:3:29,3,0	0/0:13,0:12:10.57:0,11,97	1/1:4,3:6:3.01:60,3,0	1/1:5,0:5:2.88:15,3,0	0/0:11,0:11:0:0,0,0	./.	0/0:4,0:3:3.01:0,3,41	0/0:7,0:6:0.47:0,0,1	0/1:5,3:7:44.53:45,0,61	./.	0/1:9,0:8:5.26:5,0,22	1/1:4,0:4:3.01:60,3,0	./.
chr10	26892244	.	CTG	C	742.94	PASS	AB=0.949;AC=7;AF=0.130;AN=54;BaseQRankSum=5.901;DP=327;FS=25.773;HRun=0;HaplotypeScore=46.9232;InbreedingCoeff=0.5285;MQ=52.92;MQ0=37;MQRankSum=-4.030;QD=10.32;ReadPosRankSum=-1.643;VQSLOD=1.4143;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:18:45.12:0,45,731	0/0:1,0:1:3.01:0,3,49	0/0:22,0:13:32.61:0,33,495	0/0:22,0:17:47.69:0,48,687	0/0:11,0:8:18.06:0,18,292	0/0:7,0:4:9.03:0,9,147	0/0:9,0:8:24.08:0,24,388	1/1:8,18:23:39.09:477,39,0	0/0:5,0:4:9.03:0,9,147	0/1:17,1:12:9.87:10,0,342	./.	0/0:10,0:10:21.07:0,21,343	0/0:7,0:6:18.06:0,18,293	0/1:8,1:7:18.88:19,0,227	0/0:14,0:12:27.09:0,27,440	0/0:6,0:6:12.04:0,12,196	1/1:3,10:10:30.09:369,30,0	0/0:13,0:11:33.11:0,33,538	0/0:14,0:12:24.08:0,24,392	0/0:6,0:6:15.05:0,15,243	0/0:21,0:20:51.64:0,52,809	0/0:12,0:9:12.04:0,12,194	0/0:10,0:10:30.10:0,30,489	0/0:20,0:17:42.14:0,42,669	0/0:6,0:4:9.03:0,9,147	0/0:8,0:4:12.04:0,12,196	0/0:12,0:11:33.11:0,33,522	0/1:6,0:1:0:0,0,0
chr10	26893011	.	A	AT	2380.91	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-5.785;DP=526;FS=2.214;HRun=5;HaplotypeScore=51.0094;InbreedingCoeff=0.9347;MQ=81.43;MQ0=0;MQRankSum=-3.183;QD=31.33;ReadPosRankSum=-3.428;VQSLOD=2.6949;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:60.15:0,60,645	0/0:6,0:6:15.04:0,15,161	0/0:14,0:14:26.78:0,27,281	0/0:15,0:15:3.71:0,4,313	0/0:22,0:22:63.14:0,63,668	0/0:13,0:13:33.08:0,33,355	0/0:13,0:13:36.09:0,36,387	1/1:3,32:35:93.27:1181,93,0	0/0:15,0:15:45.09:0,45,475	0/0:24,0:24:66.16:0,66,709	0/0:33,0:33:93.23:0,93,1000	0/0:14,0:14:39.10:0,39,419	0/0:16,0:16:42.10:0,42,451	0/0:14,0:14:42.11:0,42,451	1/1:1,10:11:30.10:395,30,0	0/0:15,0:15:42.10:0,42,451	1/1:4,26:30:72.23:947,72,0	0/0:16,0:16:48.08:0,48,503	0/0:16,0:16:42.08:0,42,442	0/0:36,0:36:99:0,105,1128	0/0:12,0:12:30.08:0,30,322	0/0:34,0:34:96.23:0,96,1025	0/0:25,0:25:69.17:0,69,741	0/0:5,0:5:15.04:0,15,161	0/0:14,0:14:42.11:0,42,451	0/0:20,0:20:45.09:0,45,476	0/0:26,0:26:72.18:0,72,774	0/0:8,0:8:24.06:0,24,258
chr10	26895705	.	GAC	G	701.44	PASS	AB=0.944;AC=9;AF=0.161;AN=56;BaseQRankSum=2.260;DP=507;FS=0.734;HRun=0;HaplotypeScore=95.0185;InbreedingCoeff=0.5338;MQ=73.25;MQ0=8;MQRankSum=2.463;QD=7.88;ReadPosRankSum=-0.003;VQSLOD=2.9622;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:35.71:0,36,380	0/0:5,0:5:12.02:0,12,149	0/0:35,0:24:36.07:0,36,513	0/0:35,0:29:47.29:0,47,577	0/0:22,0:22:50.62:0,51,662	0/1:24,0:22:3.44:3,0,368	0/0:12,0:12:24.07:0,24,350	1/1:7,11:17:35.77:412,36,0	0/0:14,0:14:25.23:0,25,271	0/0:19,0:19:50.79:0,51,613	0/0:17,0:17:42.02:0,42,539	0/0:19,0:18:30.49:0,30,322	0/0:18,0:18:41.90:0,42,523	0/0:26,0:26:58.40:0,58,711	1/1:18,0:18:37.38:361,37,0	0/0:17,0:17:29.57:0,30,400	1/1:1,6:7:3.01:34,3,0	0/1:17,0:16:14.08:14,0,212	0/0:12,0:12:2.59:0,3,140	0/0:24,0:24:15.05:0,15,224	0/0:18,0:18:33.01:0,33,390	0/0:17,0:17:20.82:0,21,225	0/0:15,0:15:36.05:0,36,439	0/0:12,0:12:25.17:0,25,256	0/0:25,0:24:22.28:0,22,476	0/0:14,0:14:27.07:0,27,366	0/0:24,0:23:46.91:0,47,669	0/1:4,1:5:22.85:23,0,101
chr10	26895717	.	CAT	C	281.13	PASS	AB=0.957;AC=15;AF=0.268;AN=56;BaseQRankSum=7.510;DP=466;FS=45.901;HRun=0;HaplotypeScore=90.2320;InbreedingCoeff=0.1608;MQ=60.49;MQ0=16;MQRankSum=-1.958;QD=1.56;ReadPosRankSum=0.583;VQSLOD=-0.4056;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:6.61:0,7,100	0/0:5,0:5:9.85:0,10,74	0/0:22,0:13:25.95:0,26,250	0/0:27,0:21:27.99:0,28,331	0/0:22,1:23:27.28:0,27,295	0/1:22,1:19:6.69:7,0,123	0/0:15,0:15:21.80:0,22,168	1/1:14,0:12:33.91:176,34,0	0/1:14,0:14:0.19:0,0,72	0/1:22,0:22:17.07:17,0,327	0/0:18,0:17:25.51:0,26,232	0/0:15,0:14:16.64:0,17,96	0/0:17,1:18:20.32:0,20,244	0/0:26,1:27:12.24:0,12,267	1/1:20,0:20:15.49:83,15,0	0/0:11,5:15:17.91:0,18,187	1/1:7,0:7:2.90:16,3,0	0/1:12,0:10:45.76:46,0,67	0/1:8,1:9:38.40:49,0,38	0/0:19,0:19:14.95:0,15,120	0/0:23,0:19:25.12:0,25,166	0/0:16,0:15:10.86:0,11,75	0/0:15,0:15:23.22:0,23,171	0/1:12,0:11:18.16:18,0,75	0/1:15,5:19:4.25:4,0,188	0/0:11,0:11:7.19:0,7,187	0/1:22,1:21:16.63:17,0,265	0/1:4,0:4:6.59:7,0,37
chr10	26895719	.	TAC	T	1571.35	PASS	AB=1.000;AC=40;AF=0.800;AN=50;BaseQRankSum=-3.226;DP=465;FS=0.000;HRun=0;HaplotypeScore=86.1645;InbreedingCoeff=0.1613;MQ=58.57;MQ0=20;MQRankSum=2.480;QD=4.38;ReadPosRankSum=1.637;VQSLOD=2.4079;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:16:20.80:158,21,0	1/1:5,0:5:2.63:22,3,0	./.	0/0:26,0:20:0:0,0,0	1/1:23,0:23:8.98:78,9,0	1/1:22,0:18:20.90:167,21,0	1/1:15,0:15:2.78:22,3,0	./.	1/1:14,0:14:17.72:122,18,0	0/1:23,0:23:62.15:91,0,62	1/1:17,0:16:8.87:72,9,0	1/1:14,0:13:18:136,18,0	0/1:18,0:18:15.32:15,0,18	1/1:28,0:28:23.89:186,24,0	0/0:20,0:20:20.83:0,21,163	1/1:15,0:14:0.88:2,1,0	./.	1/1:12,0:10:7.21:64,7,0	1/1:12,0:11:4.90:47,5,0	0/0:9,10:19:0:0,0,0	1/1:22,0:18:5.63:40,6,0	1/1:16,0:15:11.96:95,12,0	1/1:13,0:13:5.96:44,6,0	1/1:12,0:11:14.95:118,15,0	1/1:19,0:17:6.80:43,7,0	0/1:13,0:12:24.65:39,0,25	0/1:25,0:21:23.12:111,0,23	1/1:4,0:4:2.99:24,3,0
chr10	26895759	.	CAGAGAGAGAGAGAGAGCG	C	282.41	PASS	AB=1.000;AC=23;AF=0.442;AN=52;BaseQRankSum=-4.746;DP=470;FS=14.094;HRun=0;HaplotypeScore=146.1712;InbreedingCoeff=-0.2223;MQ=38.82;MQ0=76;MQRankSum=3.676;QD=1.01;ReadPosRankSum=-0.482;VQSLOD=1.9152;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:18:59.34:59,0,96	0/0:3,0:2:0.89:0,1,2	0/0:30,0:5:15.02:0,15,827	0/0:40,0:3:9.03:0,9,431	0/0:18,0:13:5.48:0,5,370	0/1:17,0:14:14.71:15,0,381	./.	0/1:39,0:35:21.95:22,0,1443	0/1:13,0:11:36.69:37,0,161	0/0:27,0:21:0.67:0,1,1892	1/1:12,0:8:2.03:6,2,0	0/1:12,0:10:36.75:37,0,258	0/1:11,0:8:13.63:14,0,326	0/1:21,0:18:14.28:14,0,415	1/1:19,4:22:5.96:35,6,0	1/1:13,0:9:1.82:5,2,0	0/0:9,0:8:12.91:0,13,409	0/1:8,0:6:8.78:9,0,644	0/0:16,0:13:13.79:0,14,651	./.	0/0:18,0:12:6.49:0,6,331	0/1:16,0:12:11.78:18,0,12	1/1:11,0:9:3:25,3,0	0/1:13,0:11:39.02:39,0,163	0/1:13,0:11:12.44:12,0,49	0/1:12,0:9:26.64:27,0,792	0/1:17,0:13:31.32:31,0,583	1/1:5,0:1:2.99:24,3,0
chr10	26897428	.	CCTCTCTCTCTCTCTCTCT	C	2021.57	PASS	AC=24;AF=0.632;AN=38;BaseQRankSum=2.863;DP=362;FS=4.697;HRun=0;HaplotypeScore=148.7804;InbreedingCoeff=0.4368;MQ=76.50;MQ0=13;MQRankSum=-1.216;QD=13.85;ReadPosRankSum=0.842;VQSLOD=1.9298;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	1/1:5,0:5:2.97:20,3,0	./.	./.	./.	./.	./.	0/0:23,0:22:7.42:0,7,43	1/1:6,2:8:6.02:196,6,0	1/1:12,0:11:3.01:54,3,0	./.	1/1:10,0:10:3.01:51,3,0	1/1:14,3:17:9.03:430,9,0	1/1:6,5:11:9.03:434,9,0	0/0:11,0:11:9.03:0,9,278	1/1:10,8:18:6.02:290,6,0	0/0:14,0:12:9.03:0,9,178	./.	0/0:14,0:13:0:0,0,0	0/0:8,0:8:0.89:0,1,2	0/0:24,0:23:0.47:0,0,1	1/1:5,0:5:3:25,3,0	1/1:8,3:11:3.13:128,3,0	1/1:10,1:10:3.01:145,3,0	./.	1/1:12,0:10:1.89:63,2,0	1/1:18,0:24:9.03:299,9,0	0/0:5,0:5:0.47:0,0,1
chr10	26897475	.	C	CTGTGTGTGTG	189.08	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=5.677;DP=417;FS=1.247;HRun=0;HaplotypeScore=118.4696;InbreedingCoeff=0.1794;MQ=45.55;MQ0=30;MQRankSum=-2.423;QD=2.59;ReadPosRankSum=0.161;VQSLOD=2.0087;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:15:21.07:0,21,675	0/0:8,0:8:21.54:0,22,616	0/0:15,0:6:15.02:0,15,351	0/0:6,0:1:3.01:0,3,49	0/0:14,0:14:12.04:0,12,400	0/0:17,0:16:16.35:0,16,500	0/0:32,0:32:38.44:0,38,1202	0/1:17,0:14:64.26:64,0,252	0/0:7,0:7:8.90:0,9,256	0/0:20,0:17:48.03:0,48,1472	0/0:12,0:10:18.05:0,18,478	0/0:9,0:9:12.30:0,12,403	0/1:24,0:23:10.27:10,0,1499	0/0:11,0:11:14.72:0,15,337	0/0:5,7:11:2.96:0,3,19	0/0:19,0:19:33.11:0,33,949	1/1:17,0:14:5.37:185,5,0	0/0:8,0:6:12.04:0,12,318	0/0:17,0:13:30.95:0,31,670	0/0:13,0:13:27.09:0,27,812	0/0:25,0:23:33.58:0,34,1103	0/0:15,0:15:24.08:0,24,790	0/0:14,0:14:30.57:0,31,917	0/0:18,0:16:29.89:0,30,946	0/0:13,0:13:33.11:0,33,984	0/0:14,0:13:35.99:0,36,935	0/1:15,0:15:40.81:41,0,701	0/0:6,0:3:9.03:0,9,293
chr10	26897534	.	C	CAGAGAGAG	6060.96	PASS	AB=0.745;AC=46;AF=0.885;AN=52;BaseQRankSum=-2.202;DP=520;FS=0.000;HRun=0;HaplotypeScore=149.5308;InbreedingCoeff=0.5157;MQ=62.31;MQ0=11;MQRankSum=0.197;QD=12.81;ReadPosRankSum=-1.643;VQSLOD=3.6476;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:23:18.06:407,18,0	1/1:10,0:10:11.24:148,11,0	./.	0/1:46,0:19:0:1,0,0	0/1:6,8:18:0:1,0,0	1/1:19,0:16:11.92:283,12,0	1/1:29,0:28:12.43:197,12,0	1/1:21,0:21:12.36:84,12,0	1/1:9,0:9:21.03:336,21,0	1/1:18,0:18:27.06:560,27,0	1/1:15,0:15:15.02:265,15,0	1/1:11,0:11:8.69:169,9,0	1/1:9,0:16:3.01:64,3,0	1/1:18,0:16:27.09:632,27,0	0/0:9,0:13:7.77:0,8,121	1/1:13,0:14:21.06:412,21,0	1/1:18,0:15:2.03:5,2,0	./.	1/1:22,0:22:15.05:290,15,0	0/1:9,1:22:0:0,0,0	1/1:20,0:20:12.04:268,12,0	0/1:12,4:18:0:0,0,0	1/1:18,0:17:11.87:199,12,0	1/1:24,0:24:8.55:181,9,0	1/1:18,0:18:9.50:199,10,0	1/1:21,0:22:20.29:671,20,0	1/1:18,0:14:25.62:566,26,0	1/1:5,0:4:6.02:124,6,0
chr10	26898847	.	CCTCTCTCT	C	555.03	PASS	AB=0.938;AC=12;AF=0.400;AN=30;BaseQRankSum=1.581;DP=466;FS=5.780;HRun=0;HaplotypeScore=110.2654;InbreedingCoeff=0.2895;MQ=80.95;MQ0=12;MQRankSum=-0.403;QD=5.34;ReadPosRankSum=0.403;VQSLOD=1.6478;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:0:0,0,0	./.	./.	./.	./.	0/1:21,0:20:7.88:14,0,8	./.	0/0:40,0:39:1.78:0,2,5	1/1:10,0:12:7.27:115,7,0	1/1:19,1:20:9.03:202,9,0	./.	0/0:10,0:10:3:0,3,27	0/0:16,0:16:6.86:0,7,71	0/0:15,0:14:3.01:0,3,41	./.	1/1:9,3:12:3.01:72,3,0	./.	0/1:6,1:7:18.40:68,0,18	./.	./.	0/0:16,0:15:0:0,0,0	./.	./.	0/0:15,0:15:2.99:0,3,24	./.	1/1:14,3:17:6.02:109,6,0	1/1:14,0:14:6.01:82,6,0	0/0:5,0:3:3.01:0,3,76
chr10	26902277	.	T	TA	1061.56	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-8.801;DP=504;FS=1.391;HRun=7;HaplotypeScore=44.9651;InbreedingCoeff=0.9294;MQ=75.31;MQ0=0;MQRankSum=-0.774;QD=25.89;ReadPosRankSum=-3.209;VQSLOD=2.7636;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:81.04:0,81,764	0/0:12,0:12:33.05:0,33,319	0/0:12,0:12:17.98:0,18,163	0/0:6,0:6:5.44:0,5,93	0/0:21,0:21:57.07:0,57,544	0/0:17,0:17:36.04:0,36,343	0/0:14,0:14:33.04:0,33,314	1/1:5,25:30:75.18:858,75,0	0/0:13,0:13:36.02:0,36,336	0/0:24,0:24:69.10:0,69,661	0/0:23,0:23:60.06:0,60,568	0/0:11,0:11:24.03:0,24,232	0/0:17,0:17:45:0,45,415	0/0:20,0:20:51.02:0,51,472	0/0:19,0:19:57.05:0,57,535	0/0:15,0:15:33.05:0,33,318	1/1:0,11:11:27.08:325,27,0	0/0:8,0:8:21.03:0,21,203	0/0:20,0:20:53.44:0,53,496	0/0:25,0:25:63.06:0,63,594	0/0:7,0:7:18.02:0,18,174	0/0:11,0:11:27.04:0,27,261	0/0:27,0:27:75.07:0,75,706	0/0:7,0:7:21.02:0,21,197	0/0:30,0:30:84.12:0,84,806	0/0:28,0:28:75.10:0,75,717	0/0:25,0:25:69.10:0,69,661	0/0:19,0:19:57.02:0,57,528
chr10	26906026	.	TC	T	547.94	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.191;DP=569;FS=0.805;HRun=7;HaplotypeScore=57.9768;InbreedingCoeff=0.9887;MQ=74.18;MQ0=1;MQRankSum=-0.961;QD=18.89;ReadPosRankSum=2.508;VQSLOD=3.3286;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:96.26:0,96,1167	0/0:11,0:11:24.08:0,24,302	0/0:26,0:25:63.18:0,63,737	0/0:17,0:16:36.05:0,36,402	0/0:26,0:26:72.18:0,72,864	0/0:35,0:34:99:0,99,1190	0/0:33,0:33:96.25:0,96,1177	0/0:17,0:17:27.08:0,27,327	0/0:19,0:19:54.16:0,54,667	0/0:26,0:26:66.21:0,66,820	0/0:10,0:10:30.08:0,30,363	0/0:17,0:17:49.39:0,49,593	0/0:10,0:10:24.08:0,24,302	0/0:26,0:26:78.25:0,78,981	1/1:3,26:29:63.14:643,63,0	0/0:21,0:21:63.20:0,63,789	0/0:15,0:15:45.13:0,45,552	0/0:8,0:8:21.05:0,21,251	0/0:12,0:12:27.06:0,27,313	0/0:29,0:29:75.20:0,75,903	0/0:15,0:15:39.97:0,40,474	0/0:17,0:17:45.14:0,45,562	0/0:23,0:23:66.10:0,66,806	0/0:21,0:21:54.13:0,54,661	0/0:22,0:22:54.17:0,54,679	0/0:14,0:14:42.13:0,42,528	0/0:26,0:26:66.20:0,66,817	0/0:10,0:10:30.09:0,30,370
chr10	26906134	.	GC	G	1345.44	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=9.702;DP=709;FS=2.971;HRun=2;HaplotypeScore=68.6257;InbreedingCoeff=0.9987;MQ=88.92;MQ0=0;MQRankSum=-3.057;QD=33.64;ReadPosRankSum=0.828;VQSLOD=3.7417;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,132,1977	0/0:9,0:9:27.09:0,27,405	0/0:27,0:27:74.57:0,75,1129	0/0:28,0:28:67.24:0,67,1130	0/0:19,0:19:57.19:0,57,854	0/0:24,0:24:72.23:0,72,1058	0/0:19,0:19:54.16:0,54,770	0/0:28,0:28:81.27:0,81,1214	0/0:28,0:28:84.28:0,84,1257	0/0:22,0:22:66.21:0,66,957	0/0:29,0:29:87.28:0,87,1285	0/0:26,0:26:78.26:0,78,1167	0/0:20,0:20:60.16:0,60,873	0/0:35,0:35:99:0,102,1504	1/1:0,40:40:99:1440,111,0	0/0:26,0:26:78.25:0,78,1133	0/0:24,0:24:69.22:0,69,1013	0/0:22,0:22:66.22:0,66,981	0/0:17,0:17:51.15:0,51,726	0/0:28,0:28:84.27:0,84,1240	0/0:37,0:37:99:0,105,1529	0/0:25,0:25:75.25:0,75,1111	0/0:22,0:22:66.22:0,66,989	0/0:31,0:31:93.32:0,93,1394	0/0:13,0:13:39.13:0,39,584	0/0:26,0:26:78.25:0,78,1133	0/0:27,0:27:81.23:0,81,1163	0/0:11,0:11:33.11:0,33,494
chr10	26906324	.	AGGT	A	1069.06	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.765;DP=628;FS=8.912;HRun=0;HaplotypeScore=89.1998;InbreedingCoeff=0.9984;MQ=76.70;MQ0=0;MQRankSum=-2.918;QD=38.18;ReadPosRankSum=0.545;VQSLOD=4.4830;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,135,3129	0/0:11,0:11:33.11:0,33,780	0/0:18,0:18:54.11:0,54,1161	0/0:22,0:22:63.22:0,63,1403	0/0:30,0:30:90.31:0,90,2123	0/0:19,0:19:54.19:0,54,1275	0/0:15,0:15:45.15:0,45,1064	0/0:38,0:38:99:0,102,2383	0/0:30,0:30:90.31:0,90,2127	0/0:29,0:29:84.29:0,84,1956	0/0:9,0:9:27.09:0,27,639	0/0:25,0:25:72.23:0,72,1639	0/0:12,0:12:36.12:0,36,844	0/0:27,0:27:81.28:0,81,1915	1/1:2,26:28:66.23:1164,66,0	0/0:21,0:21:63.22:0,63,1490	0/0:16,0:16:48.16:0,48,1135	0/0:15,0:15:42.12:0,42,945	0/0:21,0:21:60.21:0,60,1394	0/0:27,0:27:81.28:0,81,1907	0/0:27,0:27:75.26:0,75,1773	0/0:19,0:19:57.20:0,57,1320	0/0:16,0:16:48.16:0,48,1122	0/0:12,0:12:36.12:0,36,851	0/0:21,0:21:57.18:0,57,1303	0/0:22,0:22:63.21:0,63,1446	0/0:26,0:26:78.25:0,78,1767	0/0:24,0:24:72.25:0,72,1683
chr10	26909327	.	G	GT	4067.87	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=3.166;DP=631;FS=13.083;HRun=2;HaplotypeScore=62.9214;InbreedingCoeff=0.9994;MQ=86.85;MQ0=0;MQRankSum=-1.416;QD=43.74;ReadPosRankSum=-2.078;VQSLOD=1.2800;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:60.18:0,60,820	0/0:9,0:9:27.09:0,27,378	0/0:27,0:27:53.62:0,54,914	0/0:16,0:16:42.07:0,42,551	0/0:32,0:32:96.29:0,96,1307	0/0:25,0:25:75.25:0,75,1044	0/0:20,0:20:60.17:0,60,804	1/1:1,42:43:99:1910,126,0	0/0:23,0:23:69.23:0,69,965	0/0:28,0:28:84.27:0,84,1155	0/0:19,0:19:54.18:0,54,755	0/0:19,0:19:57.19:0,57,797	0/0:20,0:20:60.20:0,60,839	0/0:19,0:19:57.19:0,57,787	1/1:1,28:29:81.28:1295,81,0	0/0:32,0:32:90.28:0,90,1227	1/1:1,20:21:54.18:863,54,0	0/0:14,0:13:39.13:0,39,545	0/0:20,0:20:60.19:0,60,824	0/0:26,0:26:78.24:0,78,1070	0/0:23,0:23:66.19:0,66,903	0/0:26,0:26:78.25:0,78,1073	0/0:20,0:20:57.18:0,57,776	0/0:16,0:16:48.16:0,48,671	0/0:18,0:18:54.17:0,54,739	0/0:24,0:24:69.23:0,69,965	0/0:31,0:31:93.27:0,93,1249	0/0:11,0:11:30.10:0,30,420
chr10	26910148	.	ATT	A	515.50	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-1.496;DP=259;FS=2.134;HRun=4;HaplotypeScore=71.0544;InbreedingCoeff=0.8068;MQ=59.54;MQ0=0;MQRankSum=-4.483;QD=22.41;ReadPosRankSum=-1.404;VQSLOD=0.8763;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:21.06:0,21,266	0/0:3,0:3:9.02:0,9,102	0/0:6,0:3:7.26:0,7,88	0/0:9,0:8:19.30:0,19,259	0/0:20,0:20:60.17:0,60,788	0/0:6,0:6:15.05:0,15,201	0/0:1,0:1:3.01:0,3,35	1/1:3,8:11:27.07:324,27,0	0/0:5,0:5:15.04:0,15,181	0/0:19,0:19:57.18:0,57,778	0/0:11,0:11:33.11:0,33,450	0/0:8,0:8:24.06:0,24,295	0/0:7,0:7:21.07:0,21,273	0/0:12,0:12:36.08:0,36,448	1/1:2,5:7:15.05:182,15,0	0/0:7,0:7:21.07:0,21,287	1/1:0,5:5:12.04:145,12,0	0/0:2,0:2:6.02:0,6,74	0/0:7,0:7:21.07:0,21,269	0/0:18,0:18:51.16:0,51,648	0/0:3,0:3:9.03:0,9,109	0/0:5,0:5:15.02:0,15,194	0/0:11,0:11:33.10:0,33,409	0/0:5,0:5:14.95:0,15,140	0/0:12,0:12:36.11:0,36,469	0/0:22,0:22:63.20:0,63,826	0/0:18,0:18:53.39:0,53,737	0/0:7,0:7:21.06:0,21,252
chr10	26910152	.	AT	A	4951.35	PASS	AB=0.556;AC=45;AF=0.804;AN=56;BaseQRankSum=-3.025;DP=252;FS=33.645;HRun=9;HaplotypeScore=51.6954;InbreedingCoeff=0.6135;MQ=61.71;MQ0=0;MQRankSum=-3.375;QD=22.82;ReadPosRankSum=3.960;VQSLOD=3.2363;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,8:9:15.01:137,15,0	1/1:0,2:2:6:55,6,0	0/0:7,0:4:11.85:0,12,102	0/0:9,0:8:11.98:0,12,113	1/1:4,15:19:42:384,42,0	1/1:2,4:6:9:82,9,0	1/1:0,1:1:3:27,3,0	0/0:8,0:8:2.36:0,2,4	1/1:0,4:4:12.01:110,12,0	1/1:4,15:19:48.02:439,48,0	1/1:1,10:11:27.01:247,27,0	1/1:2,6:8:24.01:219,24,0	1/1:1,7:8:24.01:219,24,0	1/1:3,9:12:30.02:274,30,0	0/0:6,0:6:0:0,0,0	1/1:1,6:7:21.01:192,21,0	0/0:5,0:5:0:0,0,0	1/1:0,2:2:6:55,6,0	1/1:0,7:7:21.01:192,21,0	1/1:2,16:18:48.02:439,48,0	1/1:1,3:4:12.01:110,12,0	1/1:1,4:5:12.01:109,12,0	1/1:2,10:12:32.99:297,33,0	0/1:1,4:5:4.79:94,0,5	1/1:2,10:12:30.01:274,30,0	1/1:2,19:21:57.03:522,57,0	1/1:7,10:18:32.05:280,32,0	1/1:0,7:7:21.01:192,21,0
chr10	26921739	.	ATC	A	95.89	PASS	AB=0.893;AC=3;AF=0.115;AN=26;BaseQRankSum=2.850;DP=165;FS=1.659;HRun=0;HaplotypeScore=23.2153;InbreedingCoeff=0.2051;MQ=23.21;MQ0=83;MQRankSum=-3.056;QD=2.28;ReadPosRankSum=-1.477;VQSLOD=0.9752;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:5:3.01:0,3,32	./.	./.	./.	./.	0/0:8,0:5:2.92:0,3,23	./.	0/1:22,3:12:25.80:132,0,26	./.	0/0:3,0:1:3.01:0,3,58	./.	./.	0/0:3,0:3:3.01:0,3,57	./.	0/0:2,1:2:0:0,0,0	0/0:3,0:2:3.01:0,3,58	1/1:17,0:4:5.69:46,6,0	0/0:18,0:8:14.01:0,14,246	0/0:8,0:6:14.52:0,15,180	0/0:4,0:3:0:0,0,0	./.	./.	./.	./.	./.	./.	0/0:9,0:5:3.01:0,3,58	0/0:23,0:8:9.67:0,10,228
chr10	26922440	.	GTT	G	1262.59	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.570;DP=594;FS=0.592;HRun=10;HaplotypeScore=71.9523;InbreedingCoeff=0.9865;MQ=67.11;MQ0=0;MQRankSum=-0.403;QD=23.38;ReadPosRankSum=-1.592;VQSLOD=2.8984;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:66.18:0,66,1011	0/0:8,0:9:26.58:0,27,390	0/0:9,0:7:18.04:0,18,226	0/0:9,0:9:20.74:0,21,282	0/0:35,0:36:96.20:0,96,1407	0/0:23,0:24:65.70:0,66,989	0/0:10,0:10:21.07:0,21,333	1/1:5,28:33:81.17:883,81,0	0/0:28,0:28:72.23:0,72,1117	0/0:29,0:29:78.27:0,78,1236	0/0:21,0:21:57.19:0,57,884	0/0:15,0:15:39.13:0,39,619	0/0:12,0:12:30.10:0,30,476	0/0:21,0:21:63.19:0,63,952	0/0:1,0:27:62.38:0,62,214	0/0:20,0:20:57.19:0,57,903	1/1:3,18:21:45.11:502,45,0	0/0:7,0:7:21.07:0,21,333	0/0:8,0:8:21.04:0,21,308	0/0:40,0:44:99:0,119,1766	0/0:14,0:14:36.12:0,36,572	0/0:18,0:18:51.17:0,51,809	0/0:31,0:31:87.07:0,87,1319	0/0:23,0:24:68.72:0,69,1054	0/0:23,0:23:69.21:0,69,1049	0/0:24,0:25:68.70:0,69,1012	0/0:33,0:33:91.93:0,92,1340	0/0:18,0:18:54.15:0,54,791
chr10	26922753	.	TTCTCTC	T	5616.31	PASS	AB=0.722;AC=39;AF=0.696;AN=56;BaseQRankSum=-0.900;DP=627;FS=7.349;HRun=0;HaplotypeScore=148.7714;InbreedingCoeff=0.4062;MQ=82.92;MQ0=9;MQRankSum=-2.719;QD=12.74;ReadPosRankSum=2.164;VQSLOD=3.4440;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:17:5.95:218,6,0	1/1:3,9:12:8.86:140,9,0	0/0:46,0:31:17.19:0,17,163	0/0:58,0:34:10.48:0,10,263	1/1:4,21:25:16.12:411,16,0	0/1:3,20:23:2.93:332,0,3	0/1:6,17:24:3.61:94,0,4	0/0:45,0:44:44.65:0,45,333	0/1:5,8:13:3.70:117,0,4	1/1:6,15:22:24.02:517,24,0	0/1:5,14:21:5.02:128,0,5	1/1:7,11:19:6:61,6,0	1/1:14,1:16:29.88:365,30,0	1/1:5,11:17:8.99:118,9,0	1/1:2,0:19:25.60:154,26,0	1/1:2,16:18:9.03:190,9,0	0/0:17,0:17:20.54:0,21,283	1/1:7,6:13:3.01:63,3,0	0/1:13,6:18:6.21:141,0,6	1/1:8,21:29:7.99:428,8,0	0/1:12,0:12:7.48:119,0,7	1/1:4,15:21:14.09:328,14,0	0/1:19,0:19:72.46:72,0,122	0/0:20,0:20:26.97:0,27,224	1/1:7,12:19:14.12:380,14,0	1/1:8,15:23:44.92:568,45,0	1/1:7,20:28:23.48:573,23,0	1/1:11,0:11:11.98:97,12,0
chr10	26922775	.	CTCTCTA	C	2653.74	PASS	AB=0.997;AC=25;AF=0.481;AN=52;BaseQRankSum=9.669;DP=593;FS=3.121;HRun=0;HaplotypeScore=151.8911;InbreedingCoeff=-0.5221;MQ=64.81;MQ0=14;MQRankSum=-7.302;QD=5.67;ReadPosRankSum=10.199;VQSLOD=0.9899;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:21:36.43:36,0,113	1/1:9,0:9:6.02:91,6,0	./.	0/0:31,0:14:2.96:0,3,19	0/1:30,0:30:99:238,0,118	0/1:30,0:30:99:203,0,150	0/1:24,0:24:47.70:48,0,59	1/1:36,0:33:7.06:44,7,0	0/1:15,0:15:37.95:78,0,38	0/1:27,0:27:99:193,0,174	0/1:25,0:25:48.36:48,0,80	0/0:19,0:19:3.03:0,3,118	0/1:12,0:12:23.95:139,0,24	0/1:18,1:19:78.13:78,0,104	0/0:24,0:24:36.67:0,37,230	0/1:18,0:18:12.96:125,0,13	0/1:20,0:20:11.68:12,0,126	0/1:11,0:10:35.37:35,0,38	0/1:13,0:12:51.65:52,0,104	0/1:32,0:32:99:229,0,213	0/1:14,0:13:47.60:48,0,90	0/1:25,0:25:99:169,0,102	1/1:8,12:20:8.91:134,9,0	./.	0/1:14,0:14:1:241,0,1	0/1:22,0:21:99:210,0,124	0/1:30,0:30:99:352,0,118	0/0:6,0:6:5.97:0,6,45
chr10	26922779	.	CTA	C	392.20	PASS	AB=0.984;AC=8;AF=0.143;AN=56;BaseQRankSum=3.863;DP=603;FS=2.774;HRun=0;HaplotypeScore=134.4042;InbreedingCoeff=0.3359;MQ=64.69;MQ0=13;MQRankSum=-2.688;QD=2.88;ReadPosRankSum=-0.747;VQSLOD=2.6771;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:22:39.11:0,39,430	0/0:9,0:9:5.14:0,5,52	0/1:20,0:10:4.21:4,0,49	0/0:28,0:12:17.87:0,18,173	0/0:33,0:33:47.57:0,48,378	0/0:30,0:30:36.79:0,37,263	0/0:24,0:24:5.13:0,5,113	1/1:37,0:34:51.20:322,51,0	0/1:14,1:15:31.08:31,0,45	0/0:29,0:29:28.45:0,28,613	0/1:25,0:25:6.25:6,0,152	0/0:20,0:20:18:0,18,181	0/0:12,0:12:15.27:0,15,278	0/0:20,0:20:11.05:0,11,150	0/0:25,0:25:43.37:0,43,251	0/0:18,0:18:6.37:0,6,33	1/1:16,3:19:6.39:149,6,0	0/0:12,0:11:7.53:0,8,51	0/0:15,0:13:33.94:0,34,273	0/0:33,0:33:58.43:0,58,414	0/0:14,0:13:21.34:0,21,315	0/0:25,0:25:12.08:0,12,201	0/1:20,0:20:12.70:13,0,265	0/0:21,0:21:27.07:0,27,383	0/0:15,0:15:21.80:0,22,170	0/0:22,0:21:52.80:0,53,557	0/0:32,0:32:18.51:0,19,250	0/0:6,0:6:17.99:0,18,233
chr10	26922793	.	ATCTC	A	439.42	PASS	AB=0.909;AC=4;AF=0.071;AN=56;BaseQRankSum=10.776;DP=596;FS=4.885;HRun=0;HaplotypeScore=145.5753;InbreedingCoeff=-0.0306;MQ=62.99;MQ0=9;MQRankSum=-7.529;QD=5.86;ReadPosRankSum=6.979;VQSLOD=1.9385;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:23:45.21:0,45,670	0/1:7,0:7:0.71:1,0,9	0/0:17,0:12:21.44:0,21,245	0/0:19,0:11:10.61:0,11,241	0/0:32,0:32:55.11:0,55,1015	0/0:27,0:27:29.94:0,30,631	0/0:23,0:23:25.61:0,26,440	0/1:14,19:30:68.18:387,0,68	0/0:14,0:14:12.82:0,13,266	0/0:31,0:31:59.19:0,59,1249	0/0:21,0:21:21.79:0,22,398	0/0:20,0:20:36.10:0,36,654	0/0:15,0:15:20.95:0,21,397	0/0:17,0:17:25.84:0,26,519	0/0:31,0:31:67.96:0,68,1249	0/1:15,0:15:2.30:2,0,60	0/1:20,0:20:85.81:140,0,86	0/0:16,0:15:21.23:0,21,366	0/0:16,0:14:34.52:0,35,624	0/0:36,0:36:62.44:0,62,1292	0/0:15,0:14:27.93:0,28,557	0/0:25,0:25:29.20:0,29,615	0/0:22,0:22:19.40:0,19,301	0/0:19,0:19:16.61:0,17,219	0/0:18,0:18:24.19:0,24,409	0/0:22,0:21:38.17:0,38,709	0/0:32,0:32:37.16:0,37,795	0/0:8,0:8:24.08:0,24,388
chr10	26923587	.	AT	A	639.74	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.064;DP=614;FS=2.738;HRun=7;HaplotypeScore=55.4319;InbreedingCoeff=0.9995;MQ=80.89;MQ0=0;MQRankSum=-3.166;QD=21.32;ReadPosRankSum=0.897;VQSLOD=3.2490;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:45.14:0,45,566	0/0:14,0:14:42.13:0,42,528	0/0:23,0:22:48.04:0,48,541	0/0:17,0:17:39.06:0,39,435	0/0:32,0:32:87.28:0,87,1094	0/0:25,0:25:72.22:0,72,894	0/0:17,0:17:42.13:0,42,528	0/0:26,0:26:63.18:0,63,761	0/0:17,0:17:51.16:0,51,642	0/0:24,0:24:66.20:0,66,818	0/0:30,0:30:79.14:0,79,981	0/0:19,0:19:51.14:0,51,626	0/0:22,0:22:60.19:0,60,753	0/0:19,0:19:48.15:0,48,604	1/1:2,28:30:72.16:735,72,0	0/0:19,0:19:57.17:0,57,705	0/0:19,0:19:57.18:0,57,717	0/0:14,0:14:33.11:0,33,415	0/0:26,0:26:72.10:0,72,858	0/0:24,0:24:69.22:0,69,868	0/0:19,0:19:57.18:0,57,717	0/0:21,0:21:57.17:0,57,706	0/0:25,0:25:60.18:0,60,743	0/0:23,0:23:63.20:0,63,792	0/0:23,0:23:69.22:0,69,868	0/0:24,1:25:41.63:0,42,838	0/0:26,0:26:75.21:0,75,916	0/0:17,0:17:48.15:0,48,603
chr10	26924830	.	T	TA	848.66	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-7.755;DP=595;FS=0.759;HRun=6;HaplotypeScore=52.4378;InbreedingCoeff=0.9889;MQ=71.15;MQ0=0;MQRankSum=0.248;QD=30.31;ReadPosRankSum=2.155;VQSLOD=4.2169;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:60.13:0,60,612	0/0:11,0:11:33.01:0,33,309	0/0:15,0:15:39.09:0,39,396	0/0:13,0:13:30.04:0,30,297	0/0:24,0:24:60.11:0,60,605	0/0:24,0:24:66.15:0,66,673	0/0:6,0:6:18.04:0,18,183	0/0:30,0:30:75.15:0,75,754	0/0:18,0:18:54.12:0,54,550	0/0:41,0:41:99:0,111,1133	0/0:29,0:29:84.17:0,84,850	0/0:23,0:23:60.12:0,60,605	0/0:25,0:25:69.16:0,69,703	0/0:23,0:23:66.15:0,66,672	1/1:1,27:28:75.24:944,75,0	0/0:25,0:25:69.14:0,69,697	0/0:26,0:26:72.16:0,72,734	0/0:14,0:14:39.09:0,39,398	0/0:17,0:17:48.09:0,48,482	0/0:39,0:39:99:0,108,1085	0/0:14,0:14:36.08:0,36,366	0/0:12,0:12:36.07:0,36,361	0/0:20,0:20:54.12:0,54,551	0/0:10,0:10:27:0,27,256	0/0:24,0:24:60.11:0,60,604	0/0:21,0:21:51.11:0,51,520	0/0:30,0:30:78.14:0,78,786	0/0:11,0:11:27.06:0,27,275
chr10	26925281	.	TG	T	10409.13	PASS	AB=0.911;AC=52;AF=0.929;AN=56;BaseQRankSum=-1.988;DP=515;FS=7.457;HRun=9;HaplotypeScore=110.3012;InbreedingCoeff=0.5087;MQ=79.33;MQ0=1;MQRankSum=-2.858;QD=21.03;ReadPosRankSum=2.743;VQSLOD=4.6297;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,18:19:51.02:465,51,0	1/1:0,6:7:15.01:137,15,0	0/1:22,1:15:8.08:8,0,161	0/1:16,3:18:13.38:13,0,98	1/1:6,30:36:88.71:752,89,0	1/1:2,23:25:60.03:549,60,0	1/1:2,10:12:24:219,24,0	1/1:2,26:28:78.02:707,78,0	1/1:0,12:12:33.02:302,33,0	1/1:4,14:18:44.01:374,44,0	1/1:1,18:19:54.03:493,54,0	1/1:2,11:13:30.01:274,30,0	1/1:1,15:16:45.02:411,45,0	1/1:2,17:19:51.02:466,51,0	0/0:20,0:20:18.16:0,18,165	1/1:2,24:26:69.04:630,69,0	1/1:4,19:23:62.52:542,63,0	1/1:0,6:6:12.01:110,12,0	1/1:3,14:17:42.02:384,42,0	1/1:1,17:18:41.64:349,42,0	1/1:2,15:17:45.02:411,45,0	1/1:2,11:13:33.01:301,33,0	1/1:2,9:11:29.60:257,30,0	1/1:1,14:15:42.02:383,42,0	1/1:3,17:20:42.02:384,42,0	1/1:0,23:23:68.63:612,69,0	1/1:8,16:24:54.02:493,54,0	1/1:2,14:16:42.02:384,42,0
chr10	26925974	.	G	GACATACATACAT	22656.96	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-6.934;DP=712;FS=2.759;HRun=0;HaplotypeScore=215.7902;InbreedingCoeff=0.7017;MQ=63.26;MQ0=1;MQRankSum=-6.238;QD=36.48;ReadPosRankSum=-2.321;VQSLOD=4.1689;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:26,10:37:18.95:888,19,0	1/1:5,4:11:18.06:843,18,0	0/0:30,0:24:5.91:0,6,76	0/0:15,0:14:12.04:0,12,259	1/1:18,20:40:24.08:1310,24,0	1/1:10,11:24:21.07:1089,21,0	1/1:26,0:26:24.05:631,24,0	1/1:52,0:52:66.09:1173,66,0	1/1:11,8:19:15.05:877,15,0	1/1:10,6:18:30.10:1286,30,0	1/1:15,8:23:24.08:1285,24,0	1/1:13,6:21:11.99:463,12,0	1/1:16,9:28:30.10:1587,30,0	1/1:11,6:20:6.02:351,6,0	0/0:16,0:45:18.89:0,19,155	1/1:12,11:25:18.06:892,18,0	1/1:12,0:17:3.90:150,4,0	1/1:17,5:24:9.03:478,9,0	1/1:17,0:17:12.03:245,12,0	1/1:12,16:28:30.10:1677,30,0	1/1:10,7:21:3.01:90,3,0	1/1:13,13:29:27.09:1328,27,0	1/1:13,9:22:15.05:792,15,0	1/1:11,0:18:3.01:171,3,0	1/1:9,17:29:24.08:1328,24,0	1/1:15,11:29:54.09:1887,54,0	1/1:12,18:30:30.10:1573,30,0	1/1:6,0:11:9.03:262,9,0
chr10	26926152	.	T	TACACACAC	5594.20	PASS	AB=0.870;AC=50;AF=0.962;AN=52;BaseQRankSum=-2.494;DP=468;FS=0.000;HRun=0;HaplotypeScore=157.7140;InbreedingCoeff=0.0107;MQ=58.75;MQ0=23;MQRankSum=-1.403;QD=13.04;ReadPosRankSum=-0.698;VQSLOD=3.5787;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:18:13.55:231,14,0	1/1:6,0:6:6.02:216,6,0	./.	0/1:20,0:13:0:0,0,0	1/1:11,3:19:6:241,6,0	1/1:15,0:15:6.02:182,6,0	1/1:7,1:10:3.01:122,3,0	1/1:19,0:17:8.23:74,8,0	./.	1/1:14,3:18:13.29:268,13,0	1/1:18,2:20:11.77:348,12,0	1/1:8,4:13:5.60:241,6,0	1/1:11,0:11:6.02:205,6,0	1/1:10,1:15:5.56:146,6,0	0/1:13,0:20:15.37:15,0,74	1/1:8,2:10:3.01:122,3,0	1/1:15,1:15:9.35:219,9,0	1/1:8,0:11:9.03:292,9,0	1/1:13,0:11:10.58:176,11,0	1/1:9,4:22:9:308,9,0	1/1:18,0:17:5.99:89,6,0	1/1:12,3:16:9.03:308,9,0	1/1:19,3:23:2.94:118,3,0	1/1:8,6:17:5.61:243,6,0	1/1:21,0:19:9.03:297,9,0	1/1:16,3:23:23.33:545,23,0	1/1:17,2:19:14.98:444,15,0	1/1:7,0:7:6.02:146,6,0
chr10	26927644	.	T	TA	565.34	PASS	AC=30;AF=0.938;AN=32;BaseQRankSum=-1.569;DP=222;FS=4.771;HRun=2;HaplotypeScore=21.9592;InbreedingCoeff=0.0076;MQ=33.15;MQ0=7;MQRankSum=1.404;QD=4.28;ReadPosRankSum=-0.578;VQSLOD=0.3733;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	1/1:5,0:5:3:25,3,0	./.	0/0:9,0:2:1.82:0,2,5	1/1:13,0:13:3.01:39,3,0	./.	1/1:6,0:6:5.96:43,6,0	1/1:10,0:3:6:52,6,0	./.	1/1:8,0:8:3:27,3,0	1/1:6,2:8:3.01:42,3,0	./.	./.	./.	1/1:5,0:5:3.01:39,3,0	1/1:5,2:7:3.01:42,3,0	./.	./.	1/1:6,0:5:2.90:16,3,0	1/1:10,3:13:3.01:42,3,0	./.	1/1:10,2:12:3.01:42,3,0	1/1:7,0:7:2.98:21,3,0	./.	1/1:10,2:12:6.02:85,6,0	1/1:9,2:11:6.02:79,6,0	./.	1/1:9,0:9:5.98:47,6,0
chr10	26927646	.	AG	A	246.75	PASS	AC=30;AF=0.938;AN=32;BaseQRankSum=-0.578;DP=58;FS=3.590;HRun=1;HaplotypeScore=7.9050;InbreedingCoeff=0.2052;MQ=35.83;MQ0=8;MQRankSum=1.404;QD=8.23;ReadPosRankSum=-1.569;VQSLOD=0.4129;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	1/1:2,0:2:3:25,3,0	./.	0/0:10,1:2:2.04:0,2,6	1/1:0,2:2:2.99:23,3,0	./.	1/1:2,0:2:5.96:43,6,0	1/1:2,0:2:6:52,6,0	./.	1/1:1,0:1:3:27,3,0	1/1:2,0:2:0.89:2,1,0	./.	./.	./.	1/1:0,2:2:2.99:23,3,0	1/1:2,0:2:1.25:3,1,0	./.	./.	1/1:3,0:2:2.88:15,3,0	1/1:3,0:3:1.55:4,2,0	./.	1/1:2,0:2:1.25:3,1,0	1/1:1,0:1:2.98:21,3,0	./.	1/1:2,0:2:2.49:6,2,0	1/1:2,0:2:5.48:31,5,0	./.	1/1:2,0:2:5.98:47,6,0
chr10	26929448	.	T	TGG	20875.56	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-9.162;DP=559;FS=1.241;HRun=7;HaplotypeScore=61.6731;InbreedingCoeff=0.9845;MQ=78.83;MQ0=2;MQRankSum=-6.341;QD=41.09;ReadPosRankSum=4.035;VQSLOD=4.4081;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,14:14:33.11:541,33,0	1/1:0,11:11:30.10:492,30,0	0/0:13,0:13:33.09:0,33,375	0/0:13,0:13:30.07:0,30,337	1/1:3,27:30:84.28:1326,84,0	1/1:1,29:29:81.28:1327,81,0	1/1:4,11:16:35.48:549,35,0	1/1:9,27:35:85.16:1336,85,0	1/1:1,15:16:33.11:542,33,0	1/1:2,12:14:36.12:591,36,0	1/1:7,19:26:32.68:861,33,0	1/1:0,13:13:36.12:590,36,0	1/1:3,19:23:56.55:894,57,0	1/1:1,20:21:57.19:935,57,0	0/0:25,0:25:66.17:0,66,758	1/1:0,18:17:48.16:787,48,0	1/1:2,10:12:33.11:531,33,0	1/1:1,7:8:15.05:245,15,0	1/1:1,18:19:57.19:911,57,0	1/1:1,31:32:93.31:1506,93,0	1/1:2,29:31:81.28:1329,81,0	1/1:3,21:24:60.20:983,60,0	1/1:2,28:30:81.28:1327,81,0	1/1:1,7:8:18.06:295,18,0	1/1:2,19:21:54.18:886,54,0	1/1:5,18:23:57.19:918,57,0	1/1:1,22:23:60.20:984,60,0	1/1:2,5:7:14.63:189,15,0
chr10	26934309	.	AT	A	10476.90	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-5.598;DP=599;FS=12.356;HRun=10;HaplotypeScore=76.2010;InbreedingCoeff=0.8595;MQ=76.34;MQ0=0;MQRankSum=-4.569;QD=18.51;ReadPosRankSum=5.320;VQSLOD=4.6550;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,27:32:35.79:538,36,0	1/1:0,7:7:15:130,15,0	0/0:16,0:14:6.83:0,7,205	0/0:16,1:17:12.12:0,12,209	1/1:1,34:35:86.96:755,87,0	1/1:3,24:27:62.97:547,63,0	1/1:2,16:18:41.99:365,42,0	1/1:8,0:32:44.18:129,44,0	1/1:3,12:15:32.98:286,33,0	1/1:2,21:23:62.96:542,63,0	1/1:2,21:23:56.98:495,57,0	1/1:2,21:23:53.98:469,54,0	1/1:0,21:21:59.99:521,60,0	1/1:1,12:13:29.99:260,30,0	1/1:1,0:28:48.89:144,49,0	1/1:2,12:14:5.81:279,6,0	1/1:4,0:23:38.70:114,39,0	1/1:1,5:6:11.99:104,12,0	1/1:8,17:25:53.34:451,53,0	1/1:1,38:39:99:910,105,0	1/1:4,20:24:47.97:417,48,0	1/1:3,16:19:41.97:365,42,0	1/1:2,18:20:50.98:443,51,0	1/1:2,14:16:35.98:313,36,0	1/1:2,25:27:62.99:547,63,0	1/1:2,17:19:47.99:417,48,0	1/1:0,25:25:71.99:625,72,0	1/1:0,12:12:35.99:313,36,0
chr10	26934662	.	A	AAGAAAGAAAG	41065.10	PASS	AB=0.938;AC=52;AF=0.929;AN=56;BaseQRankSum=-6.079;DP=615;FS=12.665;HRun=0;HaplotypeScore=101.1605;InbreedingCoeff=0.4129;MQ=54.06;MQ0=4;MQRankSum=-6.322;QD=69.02;ReadPosRankSum=4.325;VQSLOD=3.7930;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,14:19:21.07:1083,21,0	1/1:1,12:14:30.10:1548,30,0	0/1:15,0:13:25.86:26,0,393	0/0:20,0:16:30.39:0,30,594	1/1:4,25:37:42.14:1961,42,0	1/1:3,22:27:48.16:2450,48,0	1/1:4,9:17:12.04:517,12,0	1/1:27,0:31:87.27:2226,87,0	1/1:0,10:13:21.07:1083,21,0	1/1:1,15:17:42.13:1640,42,0	1/1:3,23:28:42.08:1924,42,0	1/1:0,22:28:42.14:2076,42,0	1/1:2,29:32:57.20:2939,57,0	1/1:1,12:14:15.05:774,15,0	1/1:3,14:23:36.02:1717,36,0	1/1:2,24:31:38.65:2012,39,0	1/1:4,7:15:19.31:931,19,0	0/1:6,0:7:41.25:290,0,41	1/1:1,10:15:42.11:1314,42,0	1/1:3,22:30:57.02:2251,57,0	1/1:1,9:13:6.02:268,6,0	1/1:0,29:32:60.05:2698,60,0	1/1:2,24:30:45.15:2114,45,0	1/1:0,9:11:15.05:773,15,0	1/1:1,17:21:21.07:1083,21,0	1/1:2,19:27:59.83:2146,60,0	1/1:0,28:33:42.14:2152,42,0	1/1:1,7:14:20.02:1068,20,0
chr10	26937642	.	GA	G	8968.21	PASS	AB=0.818;AC=49;AF=0.875;AN=56;BaseQRankSum=4.433;DP=519;FS=4.464;HRun=10;HaplotypeScore=55.3657;InbreedingCoeff=0.8084;MQ=68.22;MQ0=0;MQRankSum=-0.708;QD=19.54;ReadPosRankSum=3.767;VQSLOD=5.7887;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,0:11:18.33:54,18,0	1/1:2,10:12:29.99:260,30,0	0/0:11,0:11:24.03:0,24,246	0/1:7,1:9:46.59:50,0,47	1/1:3,20:23:53.96:469,54,0	1/1:3,19:22:50.99:442,51,0	1/1:1,8:9:20.99:182,21,0	0/0:29,0:30:62.99:0,63,663	1/1:2,16:18:47.98:417,48,0	1/1:4,27:31:77.97:676,78,0	1/1:1,25:26:68.97:598,69,0	1/1:2,13:15:32.98:286,33,0	1/1:4,18:22:50.98:442,51,0	1/1:2,6:8:12:104,12,0	1/1:4,23:27:62.38:567,62,0	1/1:4,23:27:53.99:469,54,0	0/0:19,0:19:48.11:0,48,516	1/1:0,16:17:41.03:345,41,0	1/1:5,21:26:59.94:514,60,0	1/1:1,21:23:34.84:520,35,0	1/1:1,18:19:44.98:390,45,0	1/1:1,11:12:32.99:287,33,0	1/1:4,14:18:35.99:313,36,0	1/1:2,15:17:38.96:333,39,0	1/1:1,11:12:29.99:260,30,0	1/1:4,17:21:50.98:442,51,0	1/1:7,23:30:53.96:468,54,0	1/1:0,3:3:9:78,9,0
chr10	26937725	.	C	CTGTGTGTG	23116.45	PASS	AB=1.000;AC=51;AF=0.911;AN=56;BaseQRankSum=-0.087;DP=614;FS=0.895;HRun=0;HaplotypeScore=211.3880;InbreedingCoeff=0.6514;MQ=54.44;MQ0=6;MQRankSum=-2.049;QD=40.84;ReadPosRankSum=-0.648;VQSLOD=4.4990;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:16,2:17:9.01:275,9,0	1/1:7,3:11:15.04:488,15,0	0/1:28,0:12:18.34:18,0,190	0/0:29,0:17:6.77:0,7,112	1/1:21,10:33:35.88:1031,36,0	1/1:19,7:27:47.75:1324,48,0	1/1:7,7:15:12.04:380,12,0	1/1:32,0:32:57.46:1354,57,0	1/1:5,11:17:27.09:1128,27,0	1/1:22,5:27:75.09:2231,75,0	1/1:25,8:34:45.11:1588,45,0	1/1:13,3:18:35.94:1112,36,0	1/1:18,7:25:36.11:1249,36,0	1/1:9,4:14:24.07:717,24,0	0/0:19,0:19:39.12:0,39,931	1/1:18,7:26:42.11:1438,42,0	1/1:6,8:14:9.03:376,9,0	1/1:11,3:14:21.51:537,22,0	1/1:22,3:25:29.99:844,30,0	1/1:18,6:23:30.02:936,30,0	1/1:15,1:16:12.36:95,12,0	1/1:13,6:19:21.07:800,21,0	1/1:18,4:23:23.67:578,24,0	1/1:13,2:15:8.65:60,9,0	1/1:11,6:18:24.07:686,24,0	1/1:26,6:34:75.09:1992,75,0	1/1:25,3:29:42.02:1276,42,0	1/1:6,3:9:18.06:603,18,0
chr10	26937751	.	G	GTA	2360.85	PASS	AB=0.961;AC=29;AF=0.518;AN=56;BaseQRankSum=10.783;DP=546;FS=0.000;HRun=0;HaplotypeScore=203.1981;InbreedingCoeff=-0.5297;MQ=45.69;MQ0=5;MQRankSum=-7.439;QD=4.74;ReadPosRankSum=1.393;VQSLOD=2.7046;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:18,0:18:17.57:18,0,119	1/1:6,0:6:11.71:85,12,0	0/1:16,0:6:2.45:2,0,163	0/0:21,0:12:19.45:0,19,235	0/1:35,3:38:99:107,0,469	0/1:29,0:28:96.03:96,0,206	0/1:11,0:11:14.86:15,0,88	0/1:36,0:36:23.23:23,0,1016	1/1:15,1:16:26.29:153,26,0	0/1:24,2:26:99:180,0,584	0/1:28,1:29:88.53:202,0,89	0/1:15,2:17:31.30:81,0,31	0/1:23,1:24:30.59:129,0,31	0/1:11,1:12:63.55:98,0,64	0/0:15,0:15:45.10:0,45,622	0/1:24,1:25:99:203,0,120	0/1:11,0:11:17.60:18,0,78	0/1:15,0:15:34.72:35,0,98	0/1:16,0:16:71.93:72,0,389	0/1:25,0:24:99:115,0,267	0/0:11,0:11:3.01:0,3,45	0/1:15,1:16:26.36:75,0,26	1/1:16,2:18:9.69:161,10,0	1/1:10,0:10:0.47:2,0,0	0/1:17,2:19:50.07:50,0,249	0/1:27,3:30:99:326,0,387	0/1:22,4:26:99:120,0,360	0/1:9,0:9:42.56:154,0,43
chr10	26938523	.	G	GA	2530.50	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-12.436;DP=798;FS=0.000;HRun=2;HaplotypeScore=76.9305;InbreedingCoeff=0.9802;MQ=89.48;MQ0=0;MQRankSum=-1.085;QD=35.64;ReadPosRankSum=-2.297;VQSLOD=3.0954;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,111,1373	0/0:6,0:6:18.06:0,18,223	0/0:37,0:37:99:0,99,1109	0/0:22,0:22:57.14:0,57,670	0/0:36,0:36:99:0,108,1309	0/0:33,0:33:96.27:0,96,1145	0/0:27,0:27:81.21:0,81,964	1/1:2,33:35:99:1314,99,0	0/0:29,0:29:87.17:0,87,1023	0/0:33,0:33:90.27:0,90,1106	0/0:15,0:15:42.13:0,42,520	0/0:27,0:27:75.19:0,75,891	0/0:29,0:29:87.27:0,87,1078	0/0:31,0:31:93.29:0,93,1151	0/0:43,0:43:99:0,123,1488	0/0:43,0:43:99:0,126,1521	1/1:4,32:36:93.31:1338,93,0	0/0:14,0:14:39.53:0,40,462	0/0:23,0:23:63.17:0,63,753	0/0:37,0:37:99:0,105,1270	0/0:23,0:23:57.18:0,57,703	0/0:22,0:22:60.19:0,60,743	0/0:28,0:28:75.20:0,75,895	0/0:36,0:36:99:0,102,1210	0/0:27,0:27:78.25:0,78,966	0/0:26,0:26:75.24:0,75,929	0/0:38,0:36:99:0,108,1276	0/0:4,0:4:12:0,12,120
chr10	26939179	.	C	CT	7962.18	PASS	AB=1.000;AC=47;AF=0.839;AN=56;BaseQRankSum=-11.416;DP=418;FS=3.825;HRun=9;HaplotypeScore=42.6768;InbreedingCoeff=0.8381;MQ=70.67;MQ0=0;MQRankSum=-2.482;QD=23.49;ReadPosRankSum=2.626;VQSLOD=5.5880;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,15:18:45.12:495,45,0	1/1:2,6:8:18.05:199,18,0	0/0:12,0:10:11.40:0,11,94	0/1:5,0:5:1.12:1,0,8	1/1:6,14:22:15.89:386,16,0	1/1:5,14:19:16.06:403,16,0	1/1:2,6:8:12.03:133,12,0	0/0:4,0:33:59.91:0,60,187	1/1:1,6:7:18.05:199,18,0	1/1:1,20:21:60.14:653,60,0	1/1:7,21:28:37.08:624,37,0	1/1:2,9:11:27.07:299,27,0	1/1:2,17:19:51.14:564,51,0	1/1:0,3:3:9.02:100,9,0	0/0:14,0:14:38.99:0,39,339	1/1:2,9:11:21.06:232,21,0	0/0:0,0:20:36.67:0,37,108	1/1:4,18:22:33.09:365,33,0	1/1:8,19:27:57.14:620,57,0	1/1:0,14:14:39.07:418,39,0	1/1:0,3:3:9.02:100,9,0	1/1:0,2:2:6.02:66,6,0	1/1:0,15:15:36.10:398,36,0	1/1:2,3:5:9.02:100,9,0	1/1:2,12:14:30.08:332,30,0	1/1:4,17:21:25.08:505,25,0	1/1:2,25:27:37.14:638,37,0	1/1:4,5:9:12.03:133,12,0
chr10	26939549	.	C	CA	1339.22	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=-0.516;DP=562;FS=1.182;HRun=9;HaplotypeScore=54.9460;InbreedingCoeff=0.8134;MQ=74.83;MQ0=0;MQRankSum=-1.249;QD=19.99;ReadPosRankSum=-4.620;VQSLOD=2.1894;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:62.82:0,63,531	0/0:11,0:11:32.99:0,33,287	0/0:23,0:23:36.73:0,37,282	0/1:11,0:10:3.08:3,0,130	0/0:23,0:23:65.98:0,66,573	0/0:22,0:22:56.98:0,57,495	0/0:10,0:10:20.98:0,21,182	1/1:7,31:38:90.24:995,90,0	0/0:16,0:16:38.96:0,39,333	0/0:30,0:30:83.98:0,84,729	0/0:24,0:24:56.95:0,57,495	0/0:20,0:20:23.81:0,24,436	0/0:25,0:25:65.98:0,66,573	0/0:22,1:23:26.79:0,27,462	0/0:31,0:31:89.96:0,90,777	0/0:20,0:20:56.96:0,57,491	1/1:2,16:18:42.11:465,42,0	0/0:4,0:5:8.03:0,8,58	0/0:19,0:19:50.83:0,51,426	0/0:17,0:17:47.99:0,48,417	0/0:14,0:14:32.97:0,33,286	0/0:13,0:13:38.99:0,39,338	0/0:23,0:23:53.99:0,54,469	0/0:11,0:11:32.99:0,33,287	0/0:16,0:16:44.98:0,45,391	0/0:26,0:26:56.96:0,57,495	0/0:30,0:30:74.97:0,75,651	0/0:16,0:17:50.03:0,50,423
chr10	26940509	.	AT	A	1345.93	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.446;DP=559;FS=19.352;HRun=2;HaplotypeScore=52.0121;InbreedingCoeff=0.9627;MQ=81.38;MQ0=1;MQRankSum=-2.905;QD=34.51;ReadPosRankSum=-2.802;VQSLOD=1.2289;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:54.17:0,54,780	0/0:13,0:13:39.13:0,39,584	0/0:17,0:17:48.15:0,48,697	0/0:14,0:15:36.11:0,36,495	0/0:33,0:33:99:0,99,1482	0/0:26,0:26:78.26:0,78,1164	0/0:17,0:17:48.13:0,48,674	1/1:0,28:28:84.25:1061,84,0	0/0:18,0:18:54.18:0,54,809	0/0:22,0:22:63.21:0,63,934	0/0:23,0:23:69.21:0,69,983	0/0:22,0:22:63.21:0,63,935	0/0:28,0:28:84.27:0,84,1238	0/0:24,0:24:72.23:0,72,1054	0/0:12,0:12:36.12:0,36,540	0/0:23,0:23:66.21:0,66,965	1/1:0,11:11:33.02:406,33,0	0/0:5,0:5:15.02:0,15,196	0/0:24,0:24:66.21:0,66,956	0/0:23,0:23:69.22:0,69,1014	0/0:18,0:18:51.16:0,51,744	0/0:27,0:27:81.27:0,81,1214	0/0:20,0:20:60.18:0,60,861	0/0:13,0:13:39.13:0,39,583	0/0:19,0:19:57.17:0,57,816	0/0:27,0:27:81.27:0,81,1196	0/0:29,0:28:84.27:0,84,1234	0/0:4,0:4:9.03:0,9,135
chr10	26942997	.	A	AT	644.12	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-6.767;DP=401;FS=7.465;HRun=4;HaplotypeScore=38.1659;InbreedingCoeff=0.7817;MQ=82.36;MQ0=0;MQRankSum=-2.825;QD=32.21;ReadPosRankSum=0.869;VQSLOD=3.5618;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:33.09:0,33,374	0/0:4,0:4:9.03:0,9,102	0/0:16,0:16:45.12:0,45,499	0/0:7,0:7:14.71:0,15,147	0/0:18,0:18:45.13:0,45,510	0/0:16,0:15:45.11:0,45,501	0/0:9,0:9:24.05:0,24,262	0/0:34,0:34:90.25:0,90,1013	0/0:14,0:14:39.11:0,39,442	0/0:7,0:7:21.06:0,21,238	0/0:12,0:12:33.08:0,33,365	0/0:19,0:19:57.16:0,57,647	0/0:14,0:14:39.11:0,39,442	0/0:14,0:14:36.10:0,36,408	1/1:0,20:20:54.18:739,54,0	0/0:20,0:20:60.17:0,60,680	0/0:9,0:9:15.04:0,15,170	0/0:12,0:12:30.08:0,30,339	0/0:23,0:23:66.19:0,66,749	0/0:16,0:16:48.14:0,48,544	0/0:16,0:16:42.12:0,42,476	0/0:9,0:9:24.07:0,24,272	0/0:11,0:11:33.08:0,33,364	0/0:13,0:13:36.10:0,36,408	0/0:14,0:14:42.12:0,42,477	0/0:20,0:20:57.15:0,57,638	0/0:21,0:21:63.18:0,63,715	0/0:1,0:1:3.01:0,3,34
chr10	26943643	.	CA	C	10506.16	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=0.870;DP=509;FS=7.046;HRun=9;HaplotypeScore=52.7502;InbreedingCoeff=0.9198;MQ=70.55;MQ0=0;MQRankSum=-1.872;QD=22.45;ReadPosRankSum=1.878;VQSLOD=5.6599;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,6:9:18:165,18,0	1/1:0,6:6:18.01:164,18,0	0/0:7,0:7:9.02:0,9,99	0/0:11,0:11:21.05:0,21,229	1/1:3,23:26:59.96:540,60,0	1/1:0,19:19:57.03:521,57,0	1/1:0,12:12:36.02:329,36,0	1/1:2,17:19:51.01:462,51,0	1/1:1,21:22:57.02:522,57,0	1/1:4,21:25:63:568,63,0	1/1:3,18:21:16.40:405,16,0	1/1:3,18:21:54.03:494,54,0	1/1:4,19:23:51.02:467,51,0	1/1:1,20:21:57.03:522,57,0	0/0:23,0:23:60.15:0,60,673	1/1:1,25:26:71.98:649,72,0	1/1:4,6:10:15:137,15,0	1/1:3,13:16:15.08:256,15,0	1/1:3,12:15:36:324,36,0	1/1:3,22:25:63.03:576,63,0	1/1:4,18:22:51.03:467,51,0	1/1:0,8:8:21.01:192,21,0	1/1:3,18:21:45.02:412,45,0	1/1:4,12:16:36.01:329,36,0	1/1:1,16:17:48.02:439,48,0	1/1:5,28:33:81.03:741,81,0	1/1:1,30:31:84.04:769,84,0	1/1:1,3:4:6:55,6,0
chr10	26945308	.	TTCATTG	T	20913.93	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=12.613;DP=517;FS=1.719;HRun=0;HaplotypeScore=127.8797;InbreedingCoeff=0.9388;MQ=74.99;MQ0=0;MQRankSum=-15.195;QD=54.18;ReadPosRankSum=3.777;VQSLOD=5.1862;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,9:9:24.04:524,24,0	1/1:0,12:12:30.10:686,30,0	0/0:22,0:22:57.06:0,57,1865	0/0:22,0:22:60.20:0,60,2006	1/1:1,22:23:60:1131,60,0	1/1:0,15:15:39.13:935,39,0	1/1:4,11:15:27.09:600,27,0	0/0:36,0:36:99:0,108,3873	1/1:1,11:12:30.10:719,30,0	1/1:4,21:25:63.19:1459,63,0	1/1:1,17:18:41.89:744,42,0	1/1:2,14:16:36.12:864,36,0	1/1:2,19:21:54.19:1295,54,0	1/1:0,14:14:36.12:864,36,0	0/0:27,0:27:78.27:0,78,2811	1/1:1,18:19:42.14:1008,42,0	0/0:24,0:24:72.25:0,72,2535	1/1:0,8:8:12.04:288,12,0	1/1:4,14:18:42.10:896,42,0	1/1:1,17:18:51.09:1054,51,0	1/1:1,11:12:20.99:418,21,0	1/1:2,14:16:42.10:955,42,0	1/1:2,24:26:63.13:1309,63,0	1/1:1,10:11:8.91:216,9,0	1/1:1,22:23:63.22:1497,63,0	1/1:0,23:23:69.24:1654,69,0	1/1:4,26:30:72.25:1727,72,0	1/1:0,2:2:3.01:72,3,0
chr10	26946721	.	AG	A	1719.67	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-9.823;DP=746;FS=3.502;HRun=1;HaplotypeScore=178.9541;InbreedingCoeff=0.9643;MQ=87.95;MQ0=0;MQRankSum=-0.644;QD=36.59;ReadPosRankSum=-2.112;VQSLOD=2.7501;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,108,1719	0/0:16,0:16:48.16:0,48,767	0/0:31,0:31:93.29:0,93,1431	0/0:23,0:23:63.18:0,63,968	0/0:34,0:34:99:0,102,1554	0/0:28,0:28:84.29:0,84,1342	0/0:21,0:21:63.20:0,63,984	1/1:0,27:27:81.24:1097,81,0	0/0:35,0:35:99:0,105,1630	0/0:24,0:24:72.24:0,72,1130	0/0:20,0:20:60.19:0,60,935	0/0:29,0:29:87.27:0,87,1343	0/0:32,0:32:96.27:0,96,1439	0/0:31,0:31:93.30:0,93,1460	0/0:30,0:30:90.31:0,90,1438	0/0:38,0:38:99:0,114,1819	1/1:0,19:20:46.35:744,46,0	0/0:17,0:17:51.17:0,51,814	0/0:26,0:26:78.26:0,78,1224	0/0:22,0:22:66.20:0,66,1008	0/0:38,0:38:99:0,114,1774	0/0:32,0:32:96.33:0,96,1532	0/0:24,0:24:72.23:0,72,1121	0/0:19,1:20:15.78:0,16,822	0/0:30,0:30:87.27:0,87,1345	0/0:32,0:32:96.30:0,96,1471	0/0:27,0:27:81.28:0,81,1293	0/0:3,0:3:9.03:0,9,144
chr10	26949460	.	TAAAA	T	13136.84	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=5.729;DP=557;FS=3.912;HRun=14;HaplotypeScore=141.1764;InbreedingCoeff=0.9665;MQ=69.30;MQ0=0;MQRankSum=-7.188;QD=28.56;ReadPosRankSum=6.290;VQSLOD=2.9445;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,16:25:35.96:509,36,0	1/1:0,5:6:15.03:193,15,0	0/0:19,0:17:37.08:0,37,534	0/0:21,0:17:24.80:0,25,386	1/1:9,29:38:71.99:1018,72,0	1/1:3,24:27:60.16:848,60,0	1/1:2,11:13:24:339,24,0	0/0:22,0:24:42.14:0,42,899	1/1:0,16:17:40.38:555,40,0	1/1:6,19:25:57.06:785,57,0	1/1:5,16:21:42:583,42,0	1/1:4,23:27:66.16:903,66,0	1/1:7,19:26:57.12:796,57,0	1/1:3,22:25:39.09:552,39,0	0/0:15,0:17:45.15:0,45,958	1/1:2,16:18:39.12:552,39,0	0/0:15,0:16:39.11:0,39,793	1/1:2,5:7:9.03:127,9,0	1/1:5,8:14:25.24:336,25,0	1/1:5,14:19:35.99:508,36,0	1/1:6,7:13:17.92:255,18,0	1/1:6,25:31:59.91:843,60,0	1/1:3,22:25:50.66:718,51,0	1/1:2,10:12:30.08:424,30,0	1/1:1,23:24:51.15:721,51,0	1/1:0,18:18:54.18:763,54,0	1/1:5,20:25:49.29:682,49,0	1/1:0,3:3:9.03:127,9,0
chr10	26953778	.	C	CT	17588.52	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-7.781;DP=527;FS=2.453;HRun=1;HaplotypeScore=50.0577;InbreedingCoeff=0.9976;MQ=86.63;MQ0=0;MQRankSum=-4.910;QD=41.58;ReadPosRankSum=6.286;VQSLOD=4.5257;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,23:23:69.23:1033,69,0	1/1:0,10:10:24.08:360,24,0	0/0:20,0:20:54.17:0,54,693	0/0:14,0:14:32.13:0,32,395	1/1:0,30:30:87.20:1247,87,0	1/1:0,22:22:63.21:944,63,0	1/1:0,13:13:39.13:585,39,0	0/0:25,0:25:75.22:0,75,927	1/1:2,12:14:39.09:560,39,0	1/1:0,11:11:33.11:491,33,0	1/1:1,22:23:60.20:899,60,0	1/1:1,18:19:51.17:764,51,0	1/1:0,26:26:72.24:1079,72,0	1/1:1,29:30:78.26:1169,78,0	0/0:28,0:28:75.23:0,75,959	1/1:0,18:18:51.17:764,51,0	0/0:17,0:17:51.17:0,51,658	1/1:1,8:9:21.07:315,21,0	1/1:2,22:24:69.20:983,69,0	1/1:0,12:12:30.10:450,30,0	1/1:0,15:15:45.15:674,45,0	1/1:1,16:17:45.15:674,45,0	1/1:0,18:18:48.16:719,48,0	1/1:0,9:9:27.09:405,27,0	1/1:0,16:16:45.15:674,45,0	1/1:1,31:32:96.31:1407,96,0	1/1:0,24:24:69.23:1034,69,0	1/1:0,8:8:24.08:360,24,0
chr10	26954255	.	ATTT	A	2869.44	PASS	AB=0.709;AC=31;AF=0.596;AN=52;BaseQRankSum=11.135;DP=227;FS=1.845;HRun=3;HaplotypeScore=78.2284;InbreedingCoeff=0.2804;MQ=44.84;MQ0=0;MQRankSum=-6.307;QD=16.49;ReadPosRankSum=8.210;VQSLOD=0.0554;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:10,4:14:52.30:72,0,52	0/1:2,2:4:13.73:59,0,14	0/0:2,0:1:3.01:0,3,65	0/0:3,0:1:2.74:0,3,12	0/1:5,8:13:23.01:183,0,23	1/1:1,11:12:32.34:370,32,0	0/0:2,0:2:3.84:0,4,21	0/0:28,0:28:78.15:0,78,1198	0/1:4,2:6:6.13:69,0,6	1/1:4,5:8:17.80:178,18,0	1/1:5,8:12:17.76:208,18,0	1/1:3,4:7:7.93:127,8,0	1/1:6,5:11:2.95:165,3,0	1/1:2,6:8:12.66:132,13,0	0/0:3,0:3:9.02:0,9,175	1/1:3,1:4:4.46:51,4,0	0/0:12,0:12:35.38:0,35,625	0/1:7,3:10:0.35:127,0,0	1/1:4,9:13:15.84:304,16,0	0/1:5,3:8:8.87:108,0,9	0/0:2,1:3:4.05:0,4,39	./.	1/1:2,2:4:2.02:60,2,0	./.	1/1:4,5:9:10.10:180,10,0	0/1:8,9:17:14.59:274,0,15	1/1:1,7:8:22.28:229,22,0	1/1:0,4:4:12.04:139,12,0
chr10	26955322	.	T	TTTTG	23551.03	PASS	AC=44;AF=0.815;AN=54;BaseQRankSum=-10.787;DP=705;FS=0.000;HRun=0;HaplotypeScore=100.7537;InbreedingCoeff=0.9574;MQ=64.60;MQ0=3;MQRankSum=0.057;QD=41.54;ReadPosRankSum=1.679;VQSLOD=5.2733;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,31:40:54.19:1299,54,0	1/1:5,6:11:15:307,15,0	0/0:33,0:21:11.32:0,11,187	0/0:20,0:12:15.05:0,15,227	1/1:10,34:46:80.40:2284,80,0	1/1:5,18:23:42.14:1011,42,0	1/1:17,8:26:21.07:505,21,0	0/0:18,0:25:10.01:0,10,83	1/1:5,12:19:30.10:722,30,0	1/1:6,16:23:51.14:1045,51,0	1/1:6,23:29:66.14:1430,66,0	1/1:3,13:19:30.10:710,30,0	1/1:10,15:25:39.08:872,39,0	1/1:4,17:21:48.16:1147,48,0	0/0:26,0:26:69.20:0,69,1042	1/1:4,12:18:30.10:722,30,0	0/0:5,0:24:45.04:0,45,415	1/1:8,12:21:29.89:663,30,0	1/1:16,13:28:48.09:903,48,0	1/1:11,30:42:99:2121,99,0	./.	1/1:5,18:24:57.07:1264,57,0	1/1:7,22:27:49.41:1158,49,0	1/1:13,8:21:25.64:582,26,0	1/1:6,23:30:63.22:1516,63,0	1/1:9,26:35:78.27:1852,78,0	1/1:11,18:30:51.64:1221,52,0	1/1:2,4:6:9.03:217,9,0
chr10	26957025	.	TA	T	1070.62	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.669;DP=507;FS=14.323;HRun=8;HaplotypeScore=50.5250;InbreedingCoeff=0.9792;MQ=74.60;MQ0=0;MQRankSum=0.153;QD=20.59;ReadPosRankSum=-4.559;VQSLOD=1.1970;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:66.20:0,66,795	0/0:11,0:11:30.08:0,30,351	0/0:15,0:15:25.75:0,26,359	0/0:5,0:5:11.90:0,12,102	0/0:27,0:27:81.25:0,81,976	0/0:26,0:26:63.14:0,63,735	0/0:16,0:16:45.14:0,45,544	1/1:6,25:32:74.06:671,74,0	0/0:17,0:17:39.09:0,39,449	0/0:23,0:23:66.20:0,66,784	0/0:22,0:22:66.20:0,66,797	0/0:16,0:16:48.15:0,48,580	0/0:17,0:17:42.12:0,42,498	0/0:22,0:22:63.18:0,63,749	0/0:14,0:14:42.13:0,42,507	0/0:16,0:16:45.14:0,45,543	1/1:2,18:20:54.08:521,54,0	0/0:13,0:13:39.07:0,39,443	0/0:12,0:12:36.06:0,36,409	0/0:24,0:24:66.20:0,66,788	0/0:7,0:7:21.06:0,21,254	0/0:12,0:12:24.08:0,24,354	0/0:17,0:17:48.07:0,48,551	0/0:10,0:10:27.08:0,27,325	0/0:21,0:21:60.18:0,60,716	0/0:27,0:27:78.24:0,78,942	0/0:25,0:27:72.08:0,72,838	0/0:16,0:16:45.14:0,45,544
chr10	26961790	.	T	TA	8800.81	PASS	AB=0.806;AC=46;AF=0.821;AN=56;BaseQRankSum=-11.192;DP=501;FS=5.916;HRun=10;HaplotypeScore=58.2148;InbreedingCoeff=0.7126;MQ=64.93;MQ0=0;MQRankSum=-2.445;QD=21.11;ReadPosRankSum=1.913;VQSLOD=5.9339;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,19:21:39.10:416,39,0	1/1:1,13:14:33.97:354,34,0	0/0:8,0:8:11.96:0,12,97	0/1:8,0:8:10.31:10,0,43	1/1:4,22:26:59.95:579,60,0	1/1:3,18:21:51.13:544,51,0	1/1:6,7:14:5.25:237,5,0	0/0:3,0:28:50.92:0,51,149	1/1:2,12:14:5.43:263,5,0	1/1:6,13:20:32.17:339,32,0	1/1:5,19:24:48:475,48,0	1/1:0,10:10:24.06:256,24,0	1/1:1,21:22:48.12:512,48,0	1/1:4,12:17:22.27:350,22,0	0/0:29,0:28:80.90:0,81,665	1/1:3,13:16:36.09:384,36,0	0/0:1,0:19:32.59:0,33,96	1/1:4,8:12:21.05:224,21,0	1/1:3,17:20:45.09:470,45,0	1/1:8,13:21:33.05:341,33,0	1/1:1,6:7:15.04:160,15,0	1/1:1,22:23:54.14:576,54,0	1/1:4,18:22:38.84:416,39,0	1/1:0,11:11:30.08:320,30,0	1/1:5,17:23:20.30:405,20,0	1/1:2,18:20:54.10:559,54,0	1/1:5,15:20:1.84:431,2,0	0/1:4,6:11:1.19:182,0,1
chr10	26963363	.	TG	T	1161.58	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.151;DP=693;FS=5.463;HRun=1;HaplotypeScore=74.2094;InbreedingCoeff=0.9227;MQ=61.00;MQ0=2;MQRankSum=-3.188;QD=25.81;ReadPosRankSum=-1.927;VQSLOD=2.8686;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:81.28:0,81,1290	0/0:16,0:16:48.15:0,48,744	0/0:20,0:11:30.08:0,30,447	0/0:30,0:18:54.18:0,54,843	0/0:34,0:34:99:0,99,1461	0/0:23,0:23:69.24:0,69,1101	0/0:18,0:18:51.16:0,51,786	1/1:0,23:21:54.14:733,54,0	0/0:28,0:28:84.29:0,84,1343	0/0:36,0:36:99:0,108,1682	0/0:21,0:21:63.21:0,63,1001	0/0:27,0:27:81.26:0,81,1270	0/0:26,0:26:75.24:0,75,1174	0/0:29,0:29:87.28:0,87,1365	0/0:32,0:32:96.30:0,96,1488	0/0:18,0:17:54.18:0,54,863	1/1:2,20:21:5.58:540,6,0	0/0:18,0:18:54.14:0,54,834	0/0:24,0:23:69.24:0,69,1099	0/0:36,0:36:99:0,108,1726	0/0:26,0:26:78.20:0,78,1212	0/0:27,0:27:81.28:0,81,1291	0/0:30,0:30:90.31:0,90,1437	0/0:16,0:16:48.16:0,48,767	0/0:35,0:35:99:0,102,1629	0/0:19,0:19:57.19:0,57,908	0/0:25,0:25:75.23:0,75,1166	0/0:4,0:4:12.04:0,12,192
chr10	26963570	.	T	TG	1671.68	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-3.853;DP=617;FS=2.834;HRun=1;HaplotypeScore=64.3747;InbreedingCoeff=0.9912;MQ=66.08;MQ0=0;MQRankSum=-3.585;QD=35.57;ReadPosRankSum=-1.603;VQSLOD=3.1716;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:38:99:0,105,1347	0/0:6,0:6:18.06:0,18,234	0/0:31,0:27:75.23:0,75,940	0/0:19,0:19:31.29:0,31,441	0/0:31,0:31:81.07:0,81,1047	0/0:24,0:24:69.21:0,69,881	0/0:18,0:18:48.16:0,48,623	1/1:3,18:20:54.18:805,54,0	0/0:20,0:20:60.19:0,60,779	0/0:27,0:27:81.26:0,81,1052	0/0:17,0:17:51.17:0,51,662	0/0:22,0:22:63.19:0,63,804	0/0:15,0:15:42.14:0,42,545	0/0:20,0:20:54.18:0,54,701	0/0:25,0:25:75.24:0,75,972	0/0:22,0:22:63.20:0,63,818	1/1:0,26:26:66.22:989,66,0	0/0:10,0:10:29.12:0,29,357	0/0:16,0:16:48.14:0,48,608	0/0:26,0:26:78.25:0,78,1013	0/0:29,0:29:81.23:0,81,1023	0/0:20,0:20:60.19:0,60,778	0/0:23,0:23:69.22:0,69,896	0/0:34,0:34:93.29:0,93,1192	0/0:21,0:21:60.19:0,60,779	0/0:28,0:28:81.25:0,81,1039	0/0:20,0:20:60.17:0,60,751	0/0:7,0:7:18.06:0,18,234
chr10	26963703	.	AAC	A	4817.61	PASS	AB=0.958;AC=45;AF=0.804;AN=56;BaseQRankSum=0.751;DP=553;FS=0.000;HRun=0;HaplotypeScore=121.5355;InbreedingCoeff=0.8481;MQ=59.55;MQ0=2;MQRankSum=2.244;QD=10.23;ReadPosRankSum=1.436;VQSLOD=4.4567;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:31,0:31:47.14:266,47,0	1/1:13,0:13:23.37:88,23,0	0/0:18,0:13:20.75:0,21,383	0/0:11,0:8:24.04:0,24,342	1/1:36,1:37:58.20:373,58,0	0/1:22,1:23:13.86:140,0,14	1/1:12,0:12:12.29:97,12,0	0/0:16,0:15:32.76:0,33,131	1/1:14,2:16:24.73:231,25,0	1/1:25,2:27:29.50:314,30,0	1/1:25,1:26:66.41:317,66,0	1/1:12,0:12:18.13:69,18,0	1/1:15,0:15:25.96:98,26,0	1/1:21,0:21:39.37:193,39,0	0/0:25,0:25:72.22:0,72,1179	1/1:22,0:22:41.69:161,42,0	0/0:12,0:12:18.16:0,18,95	1/1:17,0:17:44.06:169,44,0	1/1:3,8:11:30.04:412,30,0	1/1:30,0:30:78.67:391,79,0	1/1:5,0:5:13.13:51,13,0	1/1:19,1:20:46.98:225,47,0	1/1:24,0:24:9.32:167,9,0	1/1:18,1:19:22.01:153,22,0	1/1:33,2:34:46.77:281,47,0	1/1:20,2:22:41:342,41,0	1/1:27,1:28:55.11:251,55,0	1/1:5,0:5:7.79:29,8,0
chr10	26963704	.	AC	A	15298.95	PASS	AB=1.000;AC=49;AF=0.875;AN=56;BaseQRankSum=-1.107;DP=541;FS=0.522;HRun=1;HaplotypeScore=72.9636;InbreedingCoeff=0.8121;MQ=59.58;MQ0=2;MQRankSum=-0.295;QD=31.35;ReadPosRankSum=0.879;VQSLOD=4.5078;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,26:31:87.72:1170,88,0	1/1:0,13:13:27.09:376,27,0	0/0:18,0:13:27.21:0,27,324	0/0:11,0:8:23.99:0,24,260	1/1:6,30:36:96.48:1334,96,0	1/1:8,14:22:45.46:665,45,0	1/1:2,9:11:28.51:400,29,0	1/1:14,0:13:15.08:43,15,0	1/1:6,10:16:44.95:550,45,0	1/1:5,21:26:65.26:829,65,0	1/1:1,25:26:74.61:899,75,0	1/1:0,10:10:21.07:293,21,0	1/1:0,15:15:30.10:418,30,0	1/1:4,17:21:59.90:746,60,0	0/0:24,0:24:72.20:0,72,940	1/1:0,20:20:48.16:667,48,0	0/1:12,0:12:20.06:20,0,23	1/1:0,17:17:51.17:708,51,0	1/1:10,1:11:29.73:208,30,0	1/1:1,29:30:84.47:1002,84,0	1/1:0,5:5:15.05:208,15,0	1/1:5,15:20:58.69:734,59,0	1/1:4,20:24:55.87:849,56,0	1/1:2,17:19:39.87:559,40,0	1/1:3,32:35:67.59:918,68,0	1/1:9,13:22:58.52:722,59,0	1/1:1,26:27:63.18:855,63,0	1/1:0,5:5:9.03:125,9,0
chr10	26963705	.	CA	C	5077.19	PASS	AB=1.000;AC=45;AF=0.804;AN=56;BaseQRankSum=6.063;DP=544;FS=0.000;HRun=8;HaplotypeScore=109.4029;InbreedingCoeff=0.4142;MQ=59.69;MQ0=1;MQRankSum=-2.088;QD=10.34;ReadPosRankSum=2.953;VQSLOD=3.3531;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:31,1:32:24.20:371,24,0	1/1:13,0:13:25.77:130,26,0	0/0:18,0:14:29.63:0,30,300	0/0:11,0:8:18.06:0,18,217	1/1:36,0:36:26:399,26,0	0/1:22,0:22:73.29:169,0,73	0/1:10,0:10:6.53:97,0,7	1/1:2,12:13:38.86:311,39,0	1/1:15,0:15:17.15:162,17,0	0/1:27,0:27:36.36:165,0,36	1/1:26,0:26:58.10:299,58,0	1/1:10,0:10:19.95:99,20,0	1/1:15,0:15:28.64:146,29,0	1/1:21,0:21:41.59:244,42,0	0/0:24,0:24:72.22:0,72,869	1/1:20,0:20:45.96:242,46,0	1/1:7,6:13:23.23:180,23,0	1/1:17,0:17:49.47:283,49,0	1/1:11,0:11:11.77:30,12,0	1/1:30,0:30:43.61:303,44,0	1/1:5,0:5:14.48:80,14,0	1/1:20,0:20:23.17:192,23,0	0/1:25,0:25:60.68:231,0,61	1/1:19,0:19:6.16:160,6,0	1/1:35,0:34:30.67:264,31,0	0/1:23,0:23:14.22:154,0,14	1/1:27,0:27:59.46:321,59,0	1/1:5,0:5:8.68:46,9,0
chr10	26963714	.	CCAATCAAA	C	1354.63	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.998;DP=564;FS=0.777;HRun=0;HaplotypeScore=200.3345;InbreedingCoeff=0.9821;MQ=60.58;MQ0=1;MQRankSum=-6.952;QD=54.19;ReadPosRankSum=-1.432;VQSLOD=3.0047;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,99,3795	0/0:13,0:13:36.03:0,36,1049	0/0:23,0:17:45.60:0,46,1416	0/0:11,0:10:23.99:0,24,652	0/0:39,0:39:99:0,114,3850	0/0:20,0:20:60.19:0,60,2409	0/0:13,0:13:39.12:0,39,1406	1/1:5,8:13:39.05:770,39,0	0/0:14,0:14:39.06:0,39,1326	0/0:30,0:30:84.24:0,84,2917	0/0:28,0:28:81.28:0,81,3177	0/0:12,0:12:30.10:0,30,1157	0/0:16,0:16:35.99:0,36,1112	0/0:22,0:22:60.21:0,60,2513	0/0:27,0:27:78.20:0,78,2829	0/0:19,0:19:51.04:0,51,1582	1/1:7,5:12:30.10:706,30,0	0/0:17,0:17:51.10:0,51,1681	0/0:15,0:15:39.06:0,39,1224	0/0:25,0:25:72.24:0,72,2773	0/0:5,0:5:15.05:0,15,504	0/0:21,0:21:63.22:0,63,2683	0/0:25,0:25:75.23:0,75,2835	0/0:19,0:19:48.13:0,48,1705	0/0:33,0:32:78.11:0,78,3037	0/0:22,0:22:60:0,60,1828	0/0:29,0:29:75.19:0,75,2468	0/0:5,0:5:15.05:0,15,634
chr10	26963722	.	A	AAAAAC	1531.91	PASS	AB=0.938;AC=3;AF=0.054;AN=56;BaseQRankSum=1.019;DP=583;FS=3.382;HRun=0;HaplotypeScore=165.8928;InbreedingCoeff=0.6347;MQ=63.61;MQ0=1;MQRankSum=-6.610;QD=41.40;ReadPosRankSum=-4.038;VQSLOD=2.7668;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,99,2136	0/0:12,0:12:33.03:0,33,602	0/0:23,0:18:43.82:0,44,858	0/0:14,0:13:32.84:0,33,616	0/0:37,0:37:99:0,108,2293	0/0:23,0:23:63.20:0,63,1354	0/0:16,0:16:48.12:0,48,906	1/1:11,8:22:16.99:983,17,0	0/0:14,0:14:42.12:0,42,819	0/0:24,0:24:69.24:0,69,1510	0/0:28,0:28:81.28:0,81,1778	0/0:10,0:10:30.09:0,30,608	0/0:12,0:12:30.06:0,30,594	0/0:24,0:24:69.21:0,69,1433	0/0:25,0:25:72.25:0,72,1535	0/0:20,0:20:51.10:0,51,927	0/1:14,1:15:17.75:652,0,18	0/0:18,0:18:51.12:0,51,1004	0/0:14,0:14:36.11:0,36,695	0/0:29,0:29:87.27:0,87,1804	0/0:6,0:6:18.05:0,18,328	0/0:25,0:25:72.23:0,72,1560	0/0:27,0:27:81.26:0,81,1666	0/0:17,0:17:45.13:0,45,918	0/0:34,0:34:81.27:0,81,1758	0/0:20,0:20:39.19:0,39,1039	0/0:31,0:31:75.15:0,75,1429	0/0:5,0:5:15.05:0,15,334
chr10	26964333	.	T	TA	20953.72	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=2.655;DP=573;FS=30.011;HRun=0;HaplotypeScore=86.1753;InbreedingCoeff=0.9884;MQ=75.24;MQ0=0;MQRankSum=-7.836;QD=42.85;ReadPosRankSum=3.280;VQSLOD=2.7196;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,27:28:78.27:1241,78,0	1/1:0,7:7:15.05:240,15,0	0/0:29,0:29:84.22:0,84,1135	0/0:28,0:28:78.26:0,78,1075	1/1:1,17:18:39.13:623,39,0	1/1:1,21:23:63.21:998,63,0	1/1:0,20:20:60.20:959,60,0	1/1:0,21:21:63.21:938,63,0	1/1:0,21:21:54.18:863,54,0	1/1:1,18:19:57.18:879,57,0	1/1:0,15:15:30.10:479,30,0	1/1:1,16:17:45.15:720,45,0	1/1:0,20:20:57.19:911,57,0	1/1:0,17:17:48.16:768,48,0	0/0:27,0:27:78.26:0,78,1091	1/1:1,18:19:51.17:815,51,0	1/1:0,11:11:30.10:452,30,0	1/1:0,15:15:42.14:671,42,0	1/1:0,23:22:63.21:1002,63,0	1/1:1,24:25:69.24:1103,69,0	1/1:1,30:31:84.29:1343,84,0	1/1:0,18:18:42.14:671,42,0	1/1:1,21:22:57.19:911,57,0	1/1:0,22:22:63.21:1006,63,0	1/1:1,16:17:48.16:768,48,0	1/1:1,24:25:72.20:1107,72,0	1/1:1,28:29:78.27:1246,78,0	1/1:0,6:6:15.05:240,15,0
chr10	26966167	.	A	AT	15217.43	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-5.335;DP=555;FS=35.912;HRun=6;HaplotypeScore=68.0748;InbreedingCoeff=0.9888;MQ=87.52;MQ0=0;MQRankSum=-3.088;QD=33.89;ReadPosRankSum=6.192;VQSLOD=2.5272;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,15:16:42.13:528,42,0	1/1:1,6:7:18.06:226,18,0	0/0:20,0:20:48.10:0,48,486	0/0:19,0:20:42.97:0,43,429	1/1:2,36:38:99:1341,108,0	1/1:1,29:30:81.26:1019,81,0	1/1:1,6:7:15.05:189,15,0	0/0:35,0:35:90.18:0,90,908	1/1:0,18:18:54.17:679,54,0	1/1:3,29:32:90.27:1116,90,0	1/1:3,26:30:81.23:1001,81,0	1/1:0,14:14:42.13:528,42,0	1/1:3,21:24:63.20:792,63,0	1/1:1,15:16:36.12:453,36,0	0/0:15,0:15:42.09:0,42,429	1/1:3,12:15:33.11:415,33,0	0/0:16,0:16:45.10:0,45,459	1/1:0,7:7:21.07:264,21,0	1/1:1,21:22:63.16:760,63,0	1/1:0,36:36:99:1321,105,0	1/1:0,6:6:18.06:226,18,0	1/1:2,23:25:66.21:830,66,0	1/1:5,19:24:57.18:712,57,0	1/1:1,6:7:18.06:226,18,0	1/1:0,18:18:54.17:679,54,0	1/1:1,18:19:54.15:665,54,0	1/1:2,27:29:78.25:980,78,0	1/1:1,8:9:21.07:264,21,0
chr10	26970164	.	TCAA	T	1614.63	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=2.237;DP=610;FS=3.984;HRun=0;HaplotypeScore=98.5739;InbreedingCoeff=0.9968;MQ=71.36;MQ0=0;MQRankSum=-2.744;QD=29.90;ReadPosRankSum=-2.182;VQSLOD=3.1009;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,132,2815	0/0:19,0:19:57.20:0,57,1194	0/0:22,0:22:54.18:0,54,1018	0/0:11,0:11:23.44:0,23,454	0/0:29,0:29:71.98:0,72,1502	0/0:21,0:21:54.19:0,54,1165	0/0:16,0:16:42.13:0,42,874	1/1:3,24:23:60.17:882,60,0	0/0:25,0:25:66.21:0,66,1379	0/0:27,0:27:72.24:0,72,1525	0/0:22,0:22:66.23:0,66,1388	0/0:13,0:13:30.09:0,30,610	0/0:20,0:20:57.20:0,57,1243	0/0:26,0:26:75.22:0,75,1554	0/0:23,0:23:54.19:0,54,1165	0/0:23,0:23:57.20:0,57,1232	1/1:3,24:27:54.66:855,55,0	0/0:11,0:11:24.08:0,24,521	0/0:15,0:15:36.12:0,36,787	0/0:24,0:24:69.24:0,69,1508	0/0:27,0:27:66.23:0,66,1361	0/0:21,0:21:60.21:0,60,1297	0/0:29,0:29:75.26:0,75,1623	0/0:12,0:12:36.12:0,36,785	0/0:16,0:16:45.15:0,45,984	0/0:22,0:22:51.18:0,51,1114	0/0:24,0:24:60.19:0,60,1250	0/0:11,0:11:27.09:0,27,590
chr10	26972368	.	C	CA	18373.27	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-7.207;DP=435;FS=7.989;HRun=1;HaplotypeScore=33.9381;InbreedingCoeff=0.9071;MQ=70.30;MQ0=0;MQRankSum=-4.760;QD=45.03;ReadPosRankSum=1.043;VQSLOD=3.7060;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,11:11:33.11:527,33,0	1/1:0,10:10:24.08:383,24,0	0/0:5,0:5:15.04:0,15,188	0/0:5,0:5:11.25:0,11,119	1/1:0,39:39:99:1859,117,0	1/1:0,22:21:60.20:959,60,0	1/1:0,9:9:24.08:384,24,0	1/1:0,36:36:99:1633,105,0	1/1:0,15:15:39.13:623,39,0	1/1:0,24:24:72.21:1099,72,0	1/1:0,21:21:57.19:899,57,0	1/1:0,14:14:39.13:623,39,0	1/1:0,17:17:48.16:767,48,0	1/1:0,15:15:36.12:575,36,0	0/0:17,0:17:51.17:0,51,708	1/1:0,6:6:18.06:288,18,0	1/1:0,16:16:45.10:689,45,0	1/1:0,14:14:42.14:670,42,0	1/1:0,18:18:54.17:841,54,0	1/1:0,28:28:78.27:1237,78,0	1/1:0,16:16:39.13:623,39,0	1/1:0,8:8:24.08:384,24,0	1/1:0,15:15:45.15:719,45,0	1/1:0,1:1:3.01:48,3,0	1/1:0,13:13:39.13:623,39,0	1/1:0,14:14:42.14:672,42,0	1/1:0,22:22:66.23:1055,66,0	1/1:0,4:4:12.04:192,12,0
chr10	26972579	.	AT	A	1355.78	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.780;DP=415;FS=4.098;HRun=2;HaplotypeScore=39.9935;InbreedingCoeff=0.9433;MQ=69.97;MQ0=0;MQRankSum=-2.562;QD=33.89;ReadPosRankSum=-2.393;VQSLOD=2.5420;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:30.10:0,30,450	0/0:9,0:9:27.09:0,27,405	0/0:8,0:8:24.01:0,24,278	0/0:4,0:4:12.04:0,12,180	0/0:29,0:29:87.29:0,87,1301	0/0:15,0:15:45.12:0,45,650	0/0:4,0:4:12.04:0,12,180	1/1:0,21:21:63.20:815,63,0	0/0:21,0:21:60.20:0,60,894	0/0:24,0:24:72.23:0,72,1053	0/0:32,0:32:93.29:0,93,1355	0/0:6,0:6:18.06:0,18,270	0/0:13,0:13:39.12:0,39,565	0/0:10,0:10:30.10:0,30,450	0/0:16,0:16:48.16:0,48,702	0/0:9,0:9:27.09:0,27,405	1/1:1,18:19:51.64:662,52,0	0/0:15,0:15:45.11:0,45,648	0/0:14,0:14:39.13:0,39,585	0/0:21,0:21:63.21:0,63,944	0/0:6,0:6:18.06:0,18,270	0/0:8,0:8:24.07:0,24,341	0/0:16,0:16:48.16:0,48,719	0/0:4,0:4:12.04:0,12,180	0/0:18,0:18:51.16:0,51,746	0/0:15,0:15:42.14:0,42,630	0/0:30,0:30:84.28:0,84,1258	0/0:18,0:18:48.13:0,48,679
chr10	26972706	.	TA	T	10391.26	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=2.596;DP=419;FS=3.536;HRun=7;HaplotypeScore=41.2249;InbreedingCoeff=0.8470;MQ=80.12;MQ0=1;MQRankSum=-5.166;QD=26.99;ReadPosRankSum=3.776;VQSLOD=5.2360;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,11:12:30.07:306,30,0	1/1:0,3:3:9.02:92,9,0	0/0:11,0:11:30.10:0,30,377	0/0:10,0:9:2.75:0,3,243	1/1:4,29:33:84.18:853,84,0	1/1:0,14:14:42.10:429,42,0	1/1:1,6:7:18.04:184,18,0	1/1:2,25:27:72.16:734,72,0	1/1:0,14:14:39.09:398,39,0	1/1:0,17:17:51.11:520,51,0	1/1:1,22:23:60.13:612,60,0	1/1:0,8:8:24.05:245,24,0	1/1:2,11:13:33.07:337,33,0	1/1:2,11:13:33.07:337,33,0	0/0:13,0:13:33.11:0,33,415	1/1:1,15:16:42.10:429,42,0	1/1:1,12:13:33.07:336,33,0	1/1:4,16:20:47.13:465,47,0	1/1:2,15:17:33.05:444,33,0	1/1:2,17:19:51.11:520,51,0	1/1:0,9:9:27.06:275,27,0	1/1:1,9:10:24.05:245,24,0	1/1:0,21:21:60.14:612,60,0	1/1:0,7:7:18.04:184,18,0	1/1:0,15:15:42.10:429,42,0	1/1:3,22:25:66.15:673,66,0	1/1:2,26:28:69.15:704,69,0	1/1:0,1:1:3.01:31,3,0
chr10	26973356	.	TGC	T	1339.94	PASS	AB=0.985;AC=25;AF=0.446;AN=56;BaseQRankSum=-0.227;DP=927;FS=30.369;HRun=0;HaplotypeScore=148.9414;InbreedingCoeff=-0.5606;MQ=35.14;MQ0=87;MQRankSum=-3.226;QD=1.73;ReadPosRankSum=-4.456;VQSLOD=-0.4043;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:53,0:46:44.69:45,0,149	1/1:12,1:9:6.46:49,6,0	0/0:23,0:2:5.23:0,5,51	0/0:19,0:4:11.69:0,12,74	0/1:26,0:24:46.65:47,0,184	0/1:40,2:35:54.61:55,0,210	0/1:37,1:27:8.33:8,0,213	0/1:37,0:24:54.40:54,0,184	0/1:43,0:29:63.22:71,0,63	0/1:39,0:27:99:114,0,321	0/1:18,0:16:16.12:16,0,41	0/1:27,0:20:57.84:88,0,58	0/1:24,0:20:62.47:62,0,85	0/1:39,0:30:40.31:40,0,90	0/0:47,1:41:39.12:0,39,745	0/1:26,1:18:48.54:55,0,49	1/1:33,1:27:19.68:116,20,0	0/1:20,1:18:23.88:24,0,92	0/1:23,0:14:24.07:24,0,84	0/0:25,0:22:1.22:0,1,186	0/1:85,0:64:97.84:98,0,163	0/1:38,0:35:99:166,0,101	0/1:36,1:31:44.10:44,0,252	0/0:38,0:30:12.28:0,12,106	0/1:22,1:19:38.37:38,0,109	0/1:41,0:33:99:157,0,298	0/1:28,0:26:34.70:35,0,97	0/1:15,1:14:8.14:94,0,8
chr10	26973371	.	ATG	A	505.26	PASS	AB=0.963;AC=3;AF=0.056;AN=54;BaseQRankSum=-0.630;DP=1183;FS=8.325;HRun=0;HaplotypeScore=158.3308;InbreedingCoeff=0.4350;MQ=29.76;MQ0=195;MQRankSum=-5.728;QD=5.55;ReadPosRankSum=-3.733;VQSLOD=1.9312;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:60,0:49:27.04:0,27,459	./.	0/0:20,0:1:3.01:0,3,47	0/0:18,0:4:12.04:0,12,172	0/0:29,0:24:27.54:0,28,460	0/0:52,1:41:10.27:0,10,485	0/0:51,1:28:30.10:0,30,510	1/1:25,14:19:42.14:537,42,0	0/0:59,0:33:10.64:0,11,243	0/0:60,0:28:50.60:0,51,776	0/0:24,0:18:6.01:0,6,102	0/0:44,3:28:6.39:0,6,123	0/0:28,1:22:19.59:0,20,310	0/0:57,0:37:17.89:0,18,271	0/0:68,1:52:32.70:0,33,1149	0/0:42,0:25:12.01:0,12,175	0/0:40,1:28:13.43:0,13,124	0/0:21,0:15:21.07:0,21,342	0/0:30,0:17:12.38:0,12,375	0/0:36,1:32:24.08:0,24,408	0/0:89,1:62:30.81:0,31,483	0/0:45,1:37:24.08:0,24,387	0/0:40,1:27:36.12:0,36,591	0/0:55,0:38:20.96:0,21,296	0/0:33,3:25:21.07:0,21,356	0/1:50,2:33:72.85:73,0,714	0/0:35,0:29:22.86:0,23,317	0/0:21,0:17:21.88:0,22,240
chr10	26973435	.	ATG	A	579.84	PASS	AB=0.944;AC=15;AF=0.300;AN=50;BaseQRankSum=3.948;DP=1586;FS=48.491;HRun=0;HaplotypeScore=223.0904;InbreedingCoeff=-0.1868;MQ=27.04;MQ0=359;MQRankSum=3.525;QD=0.68;ReadPosRankSum=-4.370;VQSLOD=0.2561;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:71,1:54:18.64:19,0,122	0/1:37,2:18:22.72:89,0,23	./.	./.	0/0:53,2:48:1.69:0,2,6	1/1:57,5:43:13.24:153,13,0	0/0:71,0:35:9.13:0,9,66	0/0:62,0:29:11.13:0,11,49	0/1:62,2:38:22.38:22,0,75	0/1:108,0:50:0.88:1,0,733	0/0:43,1:34:0.96:0,1,3	0/1:63,2:34:8.11:67,0,8	0/1:50,2:33:15.33:15,0,224	0/1:62,7:39:22.16:99,0,22	0/0:83,0:54:75.55:0,76,1184	0/1:54,8:34:1.59:65,0,2	0/0:49,0:32:20.54:0,21,313	0/1:25,1:17:22.21:22,0,144	0/0:32,0:17:32.61:0,33,391	0/0:51,1:40:4.16:0,4,55	0/0:124,0:73:6.85:0,7,74	./.	0/1:49,1:33:15.39:15,0,43	0/0:71,0:49:4.20:0,4,22	0/1:38,9:30:9.20:69,0,9	0/1:85,5:54:67.67:68,0,1060	0/1:37,4:27:18.96:19,0,106	0/0:27,0:14:17.66:0,18,162
chr10	26973453	.	GTA	G	966.33	PASS	AB=0.989;AC=23;AF=0.460;AN=50;BaseQRankSum=3.852;DP=1475;FS=40.179;HRun=0;HaplotypeScore=228.9316;InbreedingCoeff=-0.4765;MQ=28.00;MQ0=295;MQRankSum=1.935;QD=0.83;ReadPosRankSum=-0.295;VQSLOD=1.3557;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:64,0:47:42.73:43,0,46	0/1:37,0:20:2.82:15,0,3	./.	./.	1/1:50,0:43:5.85:44,6,0	0/1:55,0:39:9.63:107,0,10	0/1:59,1:32:13.09:13,0,14	0/0:43,0:17:47.32:0,47,402	0/1:57,2:36:21.27:21,0,21	0/1:97,1:52:99:196,0,227	1/1:41,0:33:2.99:25,3,0	0/1:61,0:32:16.31:16,0,28	0/0:54,0:35:5.41:0,5,99	0/1:67,1:41:0.27:73,0,0	0/0:80,0:55:68.50:0,68,864	0/1:61,0:35:3.16:61,0,3	0/1:51,0:35:7.73:8,0,404	0/1:24,1:16:39.60:70,0,40	0/1:28,0:12:19.08:19,0,90	0/1:49,0:38:48.82:49,0,65	0/1:123,0:77:27.65:28,0,47	./.	0/1:37,1:28:14.77:40,0,15	0/0:58,0:41:0.74:0,1,2	0/1:47,1:32:12.60:26,0,13	0/1:80,1:53:99:139,0,351	0/1:46,0:32:19.82:88,0,20	0/1:25,1:14:25.21:25,0,29
chr10	26973455	.	ATGTGTGTGTGTG	A	5380.08	PASS	AB=0.933;AC=32;AF=0.640;AN=50;BaseQRankSum=-3.997;DP=1443;FS=14.351;HRun=0;HaplotypeScore=260.8835;InbreedingCoeff=0.0615;MQ=28.30;MQ0=290;MQRankSum=2.757;QD=4.67;ReadPosRankSum=-1.145;VQSLOD=2.2327;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:62,0:46:99:180,0,104	1/1:37,0:20:9.02:278,9,0	./.	./.	0/1:30,17:40:0:0,0,0	1/1:52,0:37:2.42:451,2,0	1/1:58,0:31:4:103,4,0	0/0:42,0:19:24.08:0,24,370	1/1:54,0:33:8.81:177,9,0	0/1:78,19:51:36.67:663,0,37	1/1:27,13:32:3.48:38,3,0	1/1:60,0:32:5.44:208,5,0	0/1:52,0:33:53.94:272,0,54	1/1:66,0:38:10.68:358,11,0	0/0:81,0:55:48.12:0,48,1303	1/1:61,0:36:18.70:462,19,0	0/0:51,0:35:33.56:0,34,519	0/1:25,0:17:16.60:298,0,17	0/1:27,0:11:99:111,0,133	0/0:35,14:38:6.11:0,6,186	0/1:122,0:76:61.69:186,0,62	./.	0/1:30,10:29:7.48:63,0,7	1/1:56,0:40:2.38:48,2,0	1/1:48,0:32:12.03:357,12,0	0/1:77,0:50:99:621,0,347	1/1:42,0:30:25.82:494,26,0	0/1:26,0:14:11.07:11,0,13
chr10	26975010	.	GT	G	5574.97	PASS	AB=0.738;AC=50;AF=0.893;AN=56;BaseQRankSum=1.191;DP=526;FS=14.870;HRun=13;HaplotypeScore=80.0505;InbreedingCoeff=0.2591;MQ=80.15;MQ0=1;MQRankSum=-2.886;QD=11.33;ReadPosRankSum=2.761;VQSLOD=3.0128;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,21:24:47.71:350,48,0	1/1:1,7:8:20.88:153,21,0	0/1:46,0:23:4.78:5,0,67	0/0:33,0:18:0.64:0,1,14	1/1:4,25:31:70.44:500,70,0	1/1:6,15:23:42.80:296,43,0	1/1:1,6:7:17.89:131,18,0	1/1:14,0:39:46.36:135,46,0	1/1:5,6:12:16.92:115,17,0	1/1:6,21:28:38.44:434,38,0	0/1:5,15:22:56.06:254,0,56	1/1:2,6:8:14.90:109,15,0	1/1:6,10:17:5.07:176,5,0	1/1:4,7:11:11.89:87,12,0	0/1:7,1:10:2.48:2,0,148	1/1:1,4:5:8.94:65,9,0	1/1:1,0:11:20.37:60,20,0	1/1:0,10:10:17.90:131,18,0	1/1:7,17:24:50.58:366,51,0	1/1:6,24:33:71.47:482,71,0	1/1:1,6:8:19.93:137,20,0	1/1:2,7:9:17.88:131,18,0	1/1:3,18:23:48.76:340,49,0	1/1:0,6:7:16.95:115,17,0	1/1:4,17:21:9.56:233,10,0	0/1:4,15:21:3.59:282,0,4	1/1:8,15:23:44.53:320,45,0	1/1:2,8:11:9.52:161,10,0
chr10	26975965	.	GTGTGTGTGTGTGTGTA	G	981.76	PASS	AB=0.821;AC=4;AF=0.077;AN=52;BaseQRankSum=2.699;DP=270;FS=59.617;HRun=0;HaplotypeScore=108.3948;InbreedingCoeff=0.2929;MQ=48.37;MQ0=18;MQRankSum=2.024;QD=16.36;ReadPosRankSum=-1.898;VQSLOD=-0.5883;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:8:15.05:0,15,785	./.	0/0:24,0:8:21.06:0,21,296	0/0:26,0:10:9.06:0,9,487	0/0:6,0:6:6.02:0,6,380	0/1:6,0:6:4.95:5,0,413	0/0:5,0:5:5.42:0,5,452	1/1:14,22:36:66.06:954,66,0	0/0:6,0:5:12.04:0,12,489	0/0:5,0:5:12.04:0,12,790	0/0:8,0:8:12.04:0,12,650	0/0:6,0:6:15.05:0,15,915	0/0:3,0:3:9.03:0,9,308	0/0:2,0:2:3.01:0,3,140	0/0:11,0:11:30.05:0,30,1453	./.	0/1:7,10:18:52.10:130,0,52	0/0:7,0:7:14.98:0,15,370	0/0:11,0:9:19.89:0,20,861	0/0:10,0:10:18.06:0,18,977	0/0:19,0:15:21.07:0,21,1217	0/0:6,0:6:9.03:0,9,544	0/0:7,0:6:15.04:0,15,752	0/0:9,0:9:9.03:0,9,577	0/0:12,0:12:27.56:0,28,1504	0/0:7,0:7:21.03:0,21,888	0/0:6,0:6:15.05:0,15,707	0/0:3,0:3:9.03:0,9,520
chr10	26975979	.	GTA	G	895.78	PASS	AB=0.970;AC=24;AF=0.462;AN=52;BaseQRankSum=1.584;DP=229;FS=41.943;HRun=0;HaplotypeScore=48.4369;InbreedingCoeff=-0.3049;MQ=63.20;MQ0=14;MQRankSum=-2.208;QD=6.14;ReadPosRankSum=-1.994;VQSLOD=0.4809;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:7,0:6:13.08:30,0,13	./.	0/0:23,0:9:20.12:0,20,192	0/0:25,0:14:30.47:0,30,349	0/0:6,0:6:5.01:0,5,27	0/1:4,0:4:8.06:8,0,30	0/1:4,0:4:11.91:19,0,12	1/1:23,0:23:54.23:422,54,0	0/1:3,0:3:7.06:7,0,30	0/1:5,0:5:7.44:7,0,50	0/1:7,1:8:24.22:58,0,24	0/1:6,0:6:12.55:13,0,52	1/1:2,0:2:5.98:47,6,0	1/1:2,0:2:2.99:24,3,0	0/0:15,0:15:17.07:0,17,406	./.	1/1:11,0:11:2.98:21,3,0	0/1:5,0:5:13.63:14,0,19	0/1:7,0:6:22.74:68,0,23	0/1:8,1:9:45.85:54,0,46	0/1:12,2:11:44.99:77,0,45	0/0:6,0:6:5.92:0,6,39	0/0:6,0:5:4.85:0,5,35	0/1:9,0:9:15.01:15,0,33	0/1:10,2:12:75.36:111,0,75	0/1:7,0:7:22.28:22,0,28	0/1:4,0:4:11.01:11,0,33	0/1:4,0:4:23.99:24,0,30
chr10	26977539	.	C	CTT	5922.33	PASS	AB=0.816;AC=50;AF=0.893;AN=56;BaseQRankSum=1.035;DP=549;FS=3.963;HRun=12;HaplotypeScore=82.0828;InbreedingCoeff=0.5161;MQ=63.90;MQ0=5;MQRankSum=-0.877;QD=11.99;ReadPosRankSum=0.599;VQSLOD=3.5790;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,0:19:6.01:112,6,0	1/1:2,0:6:9.02:95,9,0	0/1:29,0:10:11.03:11,0,37	0/0:37,0:14:13.68:0,14,100	1/1:7,3:29:27.11:487,27,0	1/1:1,1:18:27.05:271,27,0	1/1:1,0:9:15.02:144,15,0	1/1:22,0:22:34.75:258,35,0	1/1:2,1:11:9.02:99,9,0	1/1:11,0:25:12.02:303,12,0	1/1:7,4:22:42.06:469,42,0	1/1:2,0:11:12.02:115,12,0	1/1:8,1:19:14.76:129,15,0	1/1:6,0:16:3.89:31,4,0	0/0:18,0:18:44.99:0,45,416	1/1:3,1:17:14.94:132,15,0	1/1:25,0:24:44.40:437,44,0	1/1:3,0:10:5.75:40,6,0	1/1:7,3:24:57.90:535,58,0	1/1:12,2:38:58.60:534,59,0	1/1:3,0:7:9.01:82,9,0	0/1:5,0:12:3.21:93,0,3	1/1:3,1:19:16.73:161,17,0	1/1:4,1:15:15.03:169,15,0	1/1:6,4:38:54.07:565,54,0	1/1:8,1:17:26.59:225,27,0	1/1:11,1:22:28.86:267,29,0	1/1:6,1:12:15.03:157,15,0
chr10	26977541	.	T	TTC	1663.48	PASS	AB=0.990;AC=19;AF=0.339;AN=56;BaseQRankSum=-1.936;DP=546;FS=3.261;HRun=0;HaplotypeScore=95.1829;InbreedingCoeff=-0.0464;MQ=64.04;MQ0=4;MQRankSum=0.767;QD=5.01;ReadPosRankSum=2.040;VQSLOD=2.4829;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:31.92:0,32,223	0/1:5,0:5:12.58:13,0,16	0/1:30,0:11:6.02:6,0,150	0/0:35,0:13:10.95:0,11,140	0/1:30,0:30:32.11:32,0,97	0/1:19,0:19:4.92:5,0,31	0/0:9,0:9:10.12:0,10,38	1/1:4,20:24:57.92:713,58,0	0/1:11,0:11:13.68:14,0,16	0/0:24,0:24:9.96:0,10,284	0/1:22,0:22:66.08:66,0,100	0/1:11,0:11:1.65:2,0,22	0/0:19,0:19:0.65:0,1,94	0/0:16,0:16:19.43:0,19,140	0/0:17,0:17:51.16:0,51,726	0/0:17,0:17:10.74:0,11,40	1/1:2,21:22:53.90:824,54,0	0/0:10,0:10:7.31:0,7,59	0/1:25,0:24:25.15:25,0,81	0/1:38,0:38:16.31:16,0,238	0/1:6,0:7:7.74:8,0,40	0/1:12,0:12:1.55:2,0,68	0/0:18,0:18:11.80:0,12,120	1/1:15,0:15:3.29:40,3,0	0/1:38,0:38:37.62:38,0,79	0/0:17,0:17:19.52:0,20,156	0/1:22,0:22:21.47:21,0,135	0/0:13,0:13:7.74:0,8,119
chr10	26980991	.	T	TA	1038.21	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-2.553;DP=671;FS=0.000;HRun=0;HaplotypeScore=100.0515;InbreedingCoeff=0.9996;MQ=60.92;MQ0=0;MQRankSum=-4.392;QD=28.84;ReadPosRankSum=-0.963;VQSLOD=3.3390;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:72.17:0,72,982	0/0:11,0:11:33.11:0,33,461	0/0:26,0:25:68.87:0,69,840	0/0:28,0:27:68.59:0,69,833	0/0:31,0:31:93.28:0,93,1264	0/0:25,0:25:72.23:0,72,989	0/0:17,0:16:44.98:0,45,602	1/1:0,20:12:36.10:538,36,0	0/0:20,0:20:57.16:0,57,756	0/0:29,0:29:87.28:0,87,1187	0/0:28,0:28:84.22:0,84,1136	0/0:13,0:13:39.11:0,39,515	0/0:18,0:18:51.15:0,51,694	0/0:19,0:19:57.19:0,57,797	0/0:32,0:32:94.17:0,94,1254	0/0:23,0:23:69.22:0,69,948	1/1:0,16:16:39.13:622,39,0	0/0:12,0:12:36.11:0,36,485	0/0:28,0:27:81.27:0,81,1132	0/0:39,0:39:99:0,108,1490	0/0:20,0:20:60.19:0,60,824	0/0:27,0:27:78.24:0,78,1071	0/0:19,0:19:57.17:0,57,764	0/0:22,0:22:63.21:0,63,879	0/0:34,0:34:99:0,99,1351	0/0:35,0:35:99:0,102,1411	0/0:38,0:38:99:0,114,1557	0/0:15,0:15:45.15:0,45,629
chr10	26981338	.	CG	C	17361.34	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=3.179;DP=618;FS=8.402;HRun=2;HaplotypeScore=111.8522;InbreedingCoeff=0.9983;MQ=59.82;MQ0=3;MQRankSum=3.343;QD=35.72;ReadPosRankSum=5.052;VQSLOD=4.1927;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,24:24:66.21:855,66,0	1/1:0,8:8:21.07:272,21,0	0/0:25,0:22:66.22:0,66,985	0/0:20,0:19:54.16:0,54,752	1/1:0,36:36:99:1323,102,0	1/1:1,35:36:96.31:1240,96,0	1/1:0,17:17:48.16:623,48,0	0/0:42,0:35:99:0,102,1500	1/1:0,14:14:36.12:467,36,0	1/1:0,38:38:99:1454,114,0	1/1:0,28:28:81.26:1050,81,0	1/1:0,19:19:48.16:623,48,0	1/1:0,19:19:51.16:654,51,0	1/1:0,13:13:36.12:465,36,0	0/0:19,0:19:57.18:0,57,834	1/1:1,13:14:36.12:467,36,0	0/0:26,0:26:69.19:0,69,1007	1/1:1,21:22:37.31:788,37,0	1/1:2,24:26:69.20:871,69,0	1/1:0,29:29:84.27:1089,84,0	1/1:0,11:11:30.10:389,30,0	1/1:0,18:18:45.14:578,45,0	1/1:0,22:22:60.19:778,60,0	1/1:1,12:13:36.12:467,36,0	1/1:0,19:19:57.19:740,57,0	1/1:0,27:27:81.26:1051,81,0	1/1:2,20:22:63.20:805,63,0	1/1:3,8:11:24.08:311,24,0
chr10	26981675	.	GA	G	9480.70	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-5.263;DP=471;FS=0.525;HRun=8;HaplotypeScore=52.1862;InbreedingCoeff=0.8952;MQ=58.29;MQ0=3;MQRankSum=3.471;QD=24.37;ReadPosRankSum=1.397;VQSLOD=5.4808;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,34:34:90.14:869,90,0	1/1:0,9:9:24.04:232,24,0	0/0:9,0:4:6.02:0,6,72	0/0:11,0:2:3.01:0,3,37	1/1:2,27:29:75.11:724,75,0	1/1:2,15:17:45.07:435,45,0	1/1:1,5:6:12.02:116,12,0	0/0:27,0:27:66.19:0,66,783	1/1:2,12:14:33.05:319,33,0	1/1:2,24:26:72.09:688,72,0	1/1:2,19:21:54.08:521,54,0	1/1:1,14:15:42.07:405,42,0	1/1:3,9:12:27.04:261,27,0	1/1:1,18:19:42.07:406,42,0	0/0:12,0:12:30.09:0,30,362	1/1:2,11:13:30.04:290,30,0	0/0:23,0:23:63.18:0,63,749	1/1:3,7:10:5.54:133,6,0	1/1:0,9:9:27.04:261,27,0	1/1:2,26:28:72.10:695,72,0	1/1:1,8:9:18.03:174,18,0	1/1:2,13:15:36.05:347,36,0	1/1:0,14:14:39.03:377,39,0	1/1:0,9:9:21.03:203,21,0	1/1:0,14:14:39.06:377,39,0	1/1:3,13:15:36.05:348,36,0	1/1:1,29:30:75.12:724,75,0	1/1:0,20:20:60.10:579,60,0
chr10	26982544	.	A	AGT	533.68	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.938;DP=550;FS=6.048;HRun=0;HaplotypeScore=68.2358;InbreedingCoeff=0.9928;MQ=63.35;MQ0=1;MQRankSum=-4.326;QD=21.35;ReadPosRankSum=-3.827;VQSLOD=2.6287;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:66.23:0,66,1076	0/0:8,0:8:24.08:0,24,392	0/0:17,0:16:48.12:0,48,714	0/0:13,0:8:18.06:0,18,274	0/0:32,0:32:93.32:0,93,1510	0/0:18,0:18:54.18:0,54,874	0/0:14,0:14:42.13:0,42,656	1/1:6,4:8:23.52:249,24,0	0/0:13,0:13:39.13:0,39,633	0/0:38,0:38:99:0,111,1812	0/0:29,0:29:84.26:0,84,1323	0/0:19,0:19:57.18:0,57,906	0/0:20,0:20:60.20:0,60,977	0/0:15,0:15:45.15:0,45,734	0/0:11,0:11:30.10:0,30,485	0/0:15,0:15:42.14:0,42,685	1/1:7,8:14:32.89:406,33,0	0/0:10,0:10:30.09:0,30,465	0/0:20,0:19:39.13:0,39,636	0/0:33,0:33:99:0,99,1567	0/0:26,0:26:78.26:0,78,1244	0/0:25,0:25:75.25:0,75,1198	0/0:18,0:18:54.13:0,54,829	0/0:14,0:14:42.10:0,42,656	0/0:24,0:24:66.22:0,66,1056	0/0:21,0:21:63.21:0,63,1000	0/0:31,0:31:90.31:0,90,1458	0/0:17,0:17:51.17:0,51,832
chr10	26982545	.	A	ATC	455.87	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.110;DP=546;FS=16.917;HRun=0;HaplotypeScore=69.3585;InbreedingCoeff=0.9835;MQ=63.29;MQ0=2;MQRankSum=-5.331;QD=18.23;ReadPosRankSum=-4.066;VQSLOD=1.3292;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:69.21:0,69,1099	0/0:8,0:8:24.08:0,24,392	0/0:17,0:15:44.81:0,45,646	0/0:13,0:8:16.92:0,17,290	0/0:32,0:32:96.30:0,96,1503	0/0:18,0:18:54.18:0,54,881	0/0:13,0:13:39.13:0,39,636	1/1:7,4:9:14.61:186,15,0	0/0:14,0:14:39.12:0,39,602	0/0:38,0:38:99:0,111,1805	0/0:29,0:29:84.27:0,84,1345	0/0:18,0:18:54.18:0,54,874	0/0:20,0:20:60.19:0,60,954	0/0:15,0:15:45.15:0,45,734	0/0:11,0:11:33.09:0,33,489	0/0:15,0:15:42.14:0,42,685	1/1:6,8:13:29.69:388,30,0	0/0:10,0:10:27.09:0,27,441	0/0:19,0:18:39.13:0,39,629	0/0:31,0:31:93.32:0,93,1503	0/0:25,0:25:75.26:0,75,1224	0/0:25,0:25:75.24:0,75,1181	0/0:17,0:17:48.16:0,48,783	0/0:14,0:14:42.14:0,42,680	0/0:24,0:24:66.23:0,66,1072	0/0:22,0:22:63.22:0,63,1023	0/0:31,0:31:90.30:0,90,1439	0/0:17,0:17:51.17:0,51,832
chr10	26983107	.	TA	T	9298.16	PASS	AB=0.955;AC=51;AF=0.911;AN=56;BaseQRankSum=0.871;DP=542;FS=1.867;HRun=10;HaplotypeScore=71.9175;InbreedingCoeff=0.6533;MQ=54.94;MQ0=8;MQRankSum=2.395;QD=18.16;ReadPosRankSum=1.218;VQSLOD=5.7201;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,25:27:68.97:599,69,0	1/1:1,9:10:26.99:234,27,0	0/1:20,1:3:17.02:17,0,57	0/0:17,0:8:21.05:0,21,224	1/1:8,24:32:68:579,68,0	1/1:1,24:24:56.98:495,57,0	1/1:4,12:14:23.98:208,24,0	1/1:8,16:18:41.95:359,42,0	1/1:3,15:18:38.99:339,39,0	1/1:6,22:27:60.83:543,61,0	1/1:1,24:25:71.98:625,72,0	1/1:2,11:13:29.99:260,30,0	1/1:3,23:26:62.97:547,63,0	1/1:0,11:11:23.94:208,24,0	0/0:12,1:12:1.02:0,1,239	1/1:0,19:19:44.99:391,45,0	1/1:4,17:21:45.46:392,45,0	1/1:6,17:20:28.71:280,29,0	1/1:3,9:10:26.99:234,27,0	1/1:4,19:23:50.97:443,51,0	1/1:2,7:9:20.99:182,21,0	1/1:6,18:24:47.97:417,48,0	1/1:2,17:19:38.99:339,39,0	1/1:3,14:17:41.99:365,42,0	1/1:3,9:12:23.99:208,24,0	1/1:5,14:18:35.98:312,36,0	1/1:3,19:22:20.81:410,21,0	1/1:3,12:15:35.97:313,36,0
chr10	26984365	.	G	GA	16449.41	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-2.807;DP=522;FS=15.487;HRun=4;HaplotypeScore=59.1926;InbreedingCoeff=0.9683;MQ=84.13;MQ0=0;MQRankSum=-3.960;QD=38.17;ReadPosRankSum=5.043;VQSLOD=2.9619;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,20:21:63.21:861,63,0	1/1:1,4:5:12.04:164,12,0	0/0:19,0:19:48.13:0,48,538	0/0:12,0:12:27.07:0,27,304	1/1:1,26:27:75.24:1026,75,0	1/1:0,25:25:72.24:985,72,0	1/1:1,10:11:30.10:410,30,0	0/0:35,0:35:81.23:0,81,919	1/1:1,19:20:54.18:734,54,0	1/1:2,29:31:90.27:1196,90,0	1/1:0,27:27:78.17:1025,78,0	1/1:1,8:9:27.09:365,27,0	1/1:0,16:16:42.14:574,42,0	1/1:1,23:24:69.19:924,69,0	0/0:15,0:15:39.11:0,39,442	1/1:0,16:16:48.16:657,48,0	0/0:10,0:10:30.09:0,30,340	1/1:0,19:19:54.18:738,54,0	1/1:0,15:15:42.12:539,42,0	1/1:3,21:24:63.16:833,63,0	1/1:0,12:12:36.12:493,36,0	1/1:1,17:18:51.17:697,51,0	1/1:2,15:16:42.14:575,42,0	1/1:0,14:14:39.13:534,39,0	1/1:0,27:27:81.27:1108,81,0	1/1:1,20:21:60.20:820,60,0	1/1:0,28:28:81.27:1108,81,0	1/1:0,4:4:6.02:82,6,0
chr10	26984840	.	TCACACACACACA	T	1339.87	PASS	AB=1.000;AC=36;AF=0.750;AN=48;BaseQRankSum=1.270;DP=428;FS=1.802;HRun=0;HaplotypeScore=147.4046;InbreedingCoeff=0.2897;MQ=77.55;MQ0=24;MQRankSum=-1.957;QD=4.79;ReadPosRankSum=-0.446;VQSLOD=2.0495;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:21,0:19:35.32:35,0,42	1/1:9,1:9:3.01:102,3,0	./.	./.	1/1:12,5:17:11.98:181,12,0	1/1:16,0:14:3.01:32,3,0	0/0:18,0:17:8.45:0,8,105	0/0:19,0:19:0:0,0,0	1/1:15,1:14:9.03:208,9,0	1/1:17,0:17:2.90:57,3,0	1/1:17,0:16:3:35,3,0	1/1:8,0:9:3.01:84,3,0	1/1:11,0:10:5.80:59,6,0	0/1:8,0:7:0:0,0,0	0/0:13,0:13:12.04:0,12,450	1/1:11,1:12:2.85:102,3,0	0/0:15,0:11:2.37:0,2,8	./.	1/1:10,0:10:5.90:38,6,0	0/0:14,0:11:0:0,0,0	1/1:22,0:18:3.01:61,3,0	1/1:12,0:11:3.01:57,3,0	1/1:13,0:12:0.47:1,0,0	1/1:15,1:12:6.02:203,6,0	1/1:18,0:13:5.91:79,6,0	1/1:18,0:16:2.81:22,3,0	1/1:15,1:15:3.01:102,3,0	./.
chr10	26985038	.	AG	A	17890.67	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=8.838;DP=588;FS=3.912;HRun=1;HaplotypeScore=61.3290;InbreedingCoeff=0.9854;MQ=85.32;MQ0=0;MQRankSum=-6.897;QD=38.23;ReadPosRankSum=4.631;VQSLOD=5.4123;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,18:18:48.12:649,48,0	1/1:0,4:4:8.99:104,9,0	0/0:18,0:18:54.14:0,54,779	0/0:22,0:22:63.21:0,63,975	1/1:0,33:33:96.23:1296,96,0	1/1:0,32:32:93.31:1300,93,0	1/1:0,15:15:36.12:503,36,0	0/0:36,0:36:99:0,108,1685	1/1:0,20:20:57.19:796,57,0	1/1:0,29:29:84.24:1123,84,0	1/1:0,27:27:78.22:1069,78,0	1/1:0,15:15:39.13:545,39,0	1/1:0,23:23:63.21:881,63,0	1/1:0,23:22:57.19:797,57,0	0/0:20,0:20:60.19:0,60,935	1/1:0,24:24:66.22:923,66,0	0/0:24,0:24:72.25:0,72,1150	1/1:0,14:14:42.14:587,42,0	1/1:0,13:13:39.13:545,39,0	1/1:0,21:21:60.12:796,60,0	1/1:1,15:16:48.15:654,48,0	1/1:0,29:29:78.26:1091,78,0	1/1:0,28:28:78.26:1090,78,0	1/1:0,19:19:53.90:754,54,0	1/1:0,15:15:36.12:503,36,0	1/1:0,21:21:63.21:879,63,0	1/1:0,21:21:51.17:713,51,0	1/1:0,8:8:21.07:294,21,0
chr10	26988222	.	TA	T	7404.74	PASS	AB=1.000;AC=47;AF=0.839;AN=56;BaseQRankSum=7.419;DP=353;FS=58.776;HRun=8;HaplotypeScore=39.7060;InbreedingCoeff=0.8459;MQ=71.58;MQ0=2;MQRankSum=-0.050;QD=25.45;ReadPosRankSum=5.273;VQSLOD=0.7752;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,14:15:39.06:377,39,0	1/1:0,9:9:24.04:232,24,0	0/1:14,0:10:7.42:7,0,187	0/0:13,0:10:19.31:0,19,220	1/1:0,19:19:57.09:550,57,0	1/1:0,7:7:21.03:203,21,0	1/1:1,10:11:27.04:261,27,0	0/0:27,0:27:72.21:0,72,858	1/1:0,19:19:54.09:521,54,0	1/1:0,13:13:39.04:369,39,0	1/1:1,11:12:33.05:319,33,0	1/1:0,3:3:9.01:87,9,0	1/1:0,11:11:30.05:290,30,0	1/1:0,11:11:30.05:290,30,0	0/0:9,0:9:27.07:0,27,315	1/1:0,8:8:21.03:203,21,0	0/0:13,0:13:39.12:0,39,471	1/1:0,13:13:36.06:348,36,0	1/1:1,13:14:39.04:366,39,0	1/1:1,16:17:45.07:435,45,0	1/1:0,2:2:6.01:58,6,0	1/1:1,7:8:21.03:203,21,0	1/1:0,13:13:36.06:348,36,0	1/1:0,7:7:21.03:203,21,0	1/1:0,15:15:42.07:406,42,0	1/1:0,14:14:42.07:406,42,0	1/1:2,23:25:69.11:666,69,0	1/1:1,10:11:27.04:261,27,0
chr10	26989922	.	GAA	G	2683.81	PASS	AB=0.563;AC=46;AF=0.821;AN=56;BaseQRankSum=-1.747;DP=251;FS=7.485;HRun=14;HaplotypeScore=33.3225;InbreedingCoeff=0.4251;MQ=53.46;MQ0=9;MQRankSum=1.107;QD=12.48;ReadPosRankSum=1.949;VQSLOD=1.1232;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,7:13:6.71:195,7,0	1/1:2,3:4:8.97:83,9,0	1/1:7,1:2:1.73:5,2,0	0/0:9,0:2:0:0,0,0	1/1:4,6:9:11.98:111,12,0	1/1:2,4:6:5.62:81,6,0	1/1:2,6:10:23.46:190,23,0	0/0:9,0:15:12.35:0,12,43	1/1:2,7:9:11.99:110,12,0	1/1:4,8:12:20.99:194,21,0	1/1:0,8:9:17.67:150,18,0	1/1:2,7:8:14.98:138,15,0	1/1:2,0:2:3:27,3,0	1/1:1,6:7:11.99:111,12,0	0/0:8,0:8:21.06:0,21,277	1/1:1,6:8:17.76:151,18,0	0/1:3,4:21:77.20:94,0,77	1/1:3,7:9:17.99:167,18,0	1/1:4,4:7:8.53:110,9,0	1/1:1,2:2:6.01:56,6,0	0/0:2,2:4:2.92:0,3,17	1/1:0,2:2:3:28,3,0	1/1:2,2:3:5.99:55,6,0	0/1:3,7:10:12.51:121,0,13	1/1:4,11:14:32.75:289,33,0	1/1:6,7:13:26.69:227,27,0	1/1:2,6:8:8.64:67,9,0	1/1:2,7:9:8.71:67,9,0
chr10	26990177	.	C	CG	99.92	PASS	AC=4;AF=0.200;AN=20;BaseQRankSum=-0.961;DP=126;FS=12.666;HRun=1;HaplotypeScore=38.3018;InbreedingCoeff=0.5861;MQ=71.51;MQ0=23;MQRankSum=-1.499;QD=14.27;ReadPosRankSum=-1.871;VQSLOD=0.9850;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:1:3:0,3,28	./.	0/0:15,0:7:17.96:0,18,204	0/0:23,0:17:47.56:0,48,592	./.	./.	1/1:2,3:3:6.02:92,6,0	0/0:22,1:20:12.40:0,12,683	./.	1/1:0,2:2:6.02:96,6,0	./.	./.	./.	./.	0/0:6,0:5:18.06:0,18,251	./.	0/0:26,0:24:64.95:0,65,827	0/0:3,0:1:3.01:0,3,38	./.	./.	./.	0/0:4,0:2:3.01:0,3,42	./.	./.	./.	./.	./.	./.
chr10	27007554	.	TC	T	4807.09	PASS	AC=50;AF=1.000;AN=50;BaseQRankSum=2.095;DP=254;FS=0.000;HRun=2;HaplotypeScore=121.6074;InbreedingCoeff=-0.0067;MQ=30.49;MQ0=0;MQRankSum=-1.289;QD=19.08;ReadPosRankSum=3.431;VQSLOD=4.9037;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,9:11:3.94:139,4,0	1/1:1,1:2:2.98:22,3,0	./.	./.	1/1:2,14:16:32.83:246,33,0	1/1:2,11:13:32.81:244,33,0	1/1:1,5:6:14.93:118,15,0	1/1:2,17:19:53.57:385,54,0	1/1:0,5:5:14.94:113,15,0	1/1:2,9:11:11.79:195,12,0	1/1:3,9:12:32.78:242,33,0	1/1:1,10:11:32.81:246,33,0	1/1:1,14:15:44.71:345,45,0	1/1:2,10:12:15.73:217,16,0	1/1:0,9:9:26.89:204,27,0	1/1:1,9:10:29.82:220,30,0	1/1:2,11:13:29.72:217,30,0	1/1:0,4:4:11.88:82,12,0	1/1:3,12:13:16.42:210,16,0	./.	1/1:1,1:2:2.88:15,3,0	1/1:1,11:12:15.92:239,16,0	1/1:0,6:6:17.89:136,18,0	1/1:0,2:2:5.98:45,6,0	1/1:0,8:8:23.91:183,24,0	1/1:2,9:11:9.87:190,10,0	1/1:3,21:24:65.56:489,66,0	1/1:0,3:3:8.94:65,9,0
chr10	27007937	.	T	TACAGGGTGATAAG	35987.26	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-4.360;DP=650;FS=5.323;HRun=0;HaplotypeScore=116.9282;InbreedingCoeff=0.8961;MQ=48.35;MQ0=3;MQRankSum=-13.759;QD=69.07;ReadPosRankSum=4.921;VQSLOD=4.3623;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,10:16:21.07:1385,21,0	1/1:6,6:12:12.04:796,12,0	0/0:27,0:24:66.23:0,66,2195	0/0:19,0:18:51:0,51,1776	1/1:15,8:28:15.05:995,15,0	1/1:7,16:15:24.08:1533,24,0	1/1:7,7:12:24.08:1216,24,0	0/0:28,0:28:72.24:0,72,2293	1/1:16,17:30:42.14:2453,42,0	1/1:14,15:24:66.20:3757,66,0	1/1:14,17:31:30.10:1737,30,0	1/1:13,17:22:21.07:1078,21,0	1/1:8,17:24:24.08:1296,24,0	1/1:14,12:28:33.11:1992,33,0	0/0:30,0:30:90.28:0,90,3054	1/1:11,13:18:24.08:1557,24,0	0/0:25,0:25:39.92:0,40,2565	1/1:4,2:5:8.99:269,9,0	1/1:5,3:5:15.05:1002,15,0	1/1:13,9:23:33.11:1965,33,0	1/1:1,3:4:3.01:190,3,0	1/1:6,19:22:33.11:2194,33,0	1/1:8,10:20:26.99:1800,27,0	1/1:2,7:9:6.02:400,6,0	1/1:9,14:26:30.10:1936,30,0	1/1:10,12:23:66.14:3566,66,0	1/1:13,23:27:39.13:2431,39,0	1/1:3,3:4:9.03:439,9,0
chr10	27009259	.	T	TTAAAAAGTGAT	26249.12	PASS	AB=0.802;AC=52;AF=0.963;AN=54;BaseQRankSum=0.530;DP=324;FS=11.306;HRun=0;HaplotypeScore=190.1184;InbreedingCoeff=-0.0524;MQ=74.28;MQ0=0;MQRankSum=-4.954;QD=81.02;ReadPosRankSum=3.694;VQSLOD=3.5575;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:24:66.23:2181,66,0	1/1:4,0:4:9.50:291,10,0	0/1:14,1:19:92.92:535,0,93	0/1:8,0:14:83.48:83,0,103	1/1:16,0:16:45.15:1516,45,0	1/1:9,0:9:27.09:769,27,0	1/1:14,0:14:42.14:1250,42,0	1/1:12,0:12:36.12:1201,36,0	1/1:15,0:15:45.15:1408,45,0	1/1:11,0:11:30.10:1011,30,0	1/1:10,0:10:27.09:733,27,0	1/1:11,0:11:33.11:1099,33,0	1/1:7,0:7:19.88:520,20,0	1/1:20,0:20:57.20:1646,57,0	1/1:14,0:14:42.14:1224,42,0	1/1:17,0:17:51.18:1586,51,0	1/1:5,0:5:15.03:391,15,0	1/1:1,0:1:3.01:119,3,0	1/1:15,0:15:45.15:1500,45,0	1/1:13,0:13:39.12:1061,39,0	1/1:9,0:9:24.08:819,24,0	1/1:13,0:13:33.10:906,33,0	1/1:9,0:9:27.09:802,27,0	1/1:11,0:11:30.06:876,30,0	1/1:2,0:2:6.02:174,6,0	1/1:11,0:11:33.11:1043,33,0	1/1:18,0:18:48.16:1501,48,0	./.
chr10	27009265	.	G	GGT	12437.45	PASS	AB=0.782;AC=52;AF=0.929;AN=56;BaseQRankSum=2.879;DP=313;FS=4.209;HRun=0;HaplotypeScore=177.4414;InbreedingCoeff=0.1432;MQ=70.70;MQ0=0;MQRankSum=-4.059;QD=39.86;ReadPosRankSum=4.430;VQSLOD=5.7523;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:24:59.21:920,59,0	1/1:4,0:4:8.88:128,9,0	0/1:5,5:11:45.14:45,0,52	0/1:10,0:11:23.21:63,0,23	1/1:16,0:16:45.15:693,45,0	1/1:9,0:9:27.08:405,27,0	1/1:16,0:16:42.14:655,42,0	1/1:12,0:12:36.12:591,36,0	1/1:14,0:14:39.60:625,40,0	1/1:12,0:12:33.09:512,33,0	1/1:11,0:11:27.09:424,27,0	1/1:11,0:11:26.69:434,27,0	1/1:7,0:7:18.06:284,18,0	1/1:20,0:20:57.19:913,57,0	1/1:15,0:15:45.15:700,45,0	1/1:13,0:13:39.13:621,39,0	1/1:3,0:3:9.03:149,9,0	0/0:1,0:1:0.47:0,0,1	1/1:16,0:16:45.05:708,45,0	1/1:12,0:12:36.12:570,36,0	1/1:9,0:9:24.08:375,24,0	1/1:13,0:13:33.11:507,33,0	1/1:8,0:8:24.08:374,24,0	1/1:10,0:10:20.85:329,21,0	1/1:3,0:3:6.02:95,6,0	1/1:13,0:13:36.11:564,36,0	1/1:17,0:17:42.14:669,42,0	1/1:2,0:2:6.02:85,6,0
chr10	27009690	.	TTA	T	7921.02	PASS	AC=48;AF=0.889;AN=54;BaseQRankSum=2.498;DP=310;FS=10.058;HRun=0;HaplotypeScore=90.1222;InbreedingCoeff=0.7411;MQ=43.17;MQ0=2;MQRankSum=-4.246;QD=28.09;ReadPosRankSum=-0.244;VQSLOD=5.8323;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,7:8:15.05:191,15,0	1/1:1,9:10:27.09:343,27,0	0/0:6,0:6:6.08:0,6,148	0/0:5,0:3:6.02:0,6,99	1/1:3,20:23:54.17:679,54,0	1/1:5,3:8:9.03:114,9,0	1/1:1,4:5:12.04:152,12,0	1/1:7,9:16:30.08:368,30,0	1/1:3,8:11:24.08:305,24,0	1/1:4,9:12:27.09:343,27,0	1/1:1,22:23:60.19:763,60,0	1/1:0,4:4:12.04:152,12,0	1/1:2,8:10:24.08:305,24,0	1/1:1,10:11:30.10:381,30,0	0/0:16,0:16:48.16:0,48,802	1/1:0,5:5:15.05:191,15,0	1/1:3,5:8:15.05:191,15,0	./.	1/1:4,11:15:36.11:447,36,0	1/1:4,14:18:43.34:519,43,0	1/1:2,1:3:3.01:38,3,0	1/1:3,2:5:9.03:114,9,0	1/1:5,13:18:36.11:455,36,0	1/1:2,1:3:3.01:38,3,0	1/1:6,13:18:36.12:458,36,0	1/1:5,15:20:42.13:534,42,0	1/1:3,16:19:48.15:610,48,0	1/1:1,6:7:18.06:229,18,0
chr10	27011561	.	T	TATCATCATCATC	8249.02	PASS	AC=44;AF=0.880;AN=50;BaseQRankSum=-2.985;DP=343;FS=4.344;HRun=0;HaplotypeScore=112.7952;InbreedingCoeff=0.4644;MQ=63.36;MQ0=3;MQRankSum=-3.909;QD=30.22;ReadPosRankSum=0.675;VQSLOD=4.1136;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	1/1:5,2:8:3.48:176,3,0	0/0:19,0:13:10.28:0,10,129	0/0:17,0:12:5.36:0,5,146	1/1:5,3:16:9.03:522,9,0	1/1:5,4:12:12.04:699,12,0	1/1:8,0:8:9.02:147,9,0	1/1:20,0:20:9.03:153,9,0	1/1:8,4:13:12.04:684,12,0	1/1:10,4:18:30.10:1179,30,0	1/1:6,3:10:3.01:175,3,0	./.	1/1:2,3:6:9.03:520,9,0	1/1:8,3:11:3.01:175,3,0	0/0:12,0:12:24.08:0,24,767	1/1:7,2:10:3.01:175,3,0	1/1:5,0:6:4.83:41,5,0	./.	1/1:7,3:11:15.05:496,15,0	1/1:5,6:20:6.02:211,6,0	1/1:14,0:14:6.02:337,6,0	1/1:8,2:15:3.01:175,3,0	1/1:4,6:15:8.76:524,9,0	1/1:4,5:12:3.01:173,3,0	1/1:2,4:14:6.02:349,6,0	1/1:4,3:11:21.06:674,21,0	1/1:5,3:14:12.04:573,12,0	1/1:9,0:9:6.02:92,6,0
chr10	27011655	.	TTG	T	1222.34	PASS	AC=42;AF=0.875;AN=48;BaseQRankSum=4.056;DP=121;FS=7.734;HRun=0;HaplotypeScore=26.7064;InbreedingCoeff=0.5315;MQ=93.08;MQ0=1;MQRankSum=-3.284;QD=15.67;ReadPosRankSum=1.538;VQSLOD=2.0807;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	1/1:3,0:3:8.98:72,9,0	0/0:8,0:8:15:0,15,145	0/0:11,0:8:19.54:0,20,176	./.	1/1:2,0:2:5.99:49,6,0	1/1:1,0:1:2.68:11,3,0	1/1:8,0:8:5.92:39,6,0	1/1:1,0:1:3:29,3,0	1/1:2,0:2:3:28,3,0	1/1:2,0:2:5.99:49,6,0	1/1:5,0:5:11.99:99,12,0	1/1:2,0:2:5.99:50,6,0	1/1:4,0:4:8.99:74,9,0	0/0:8,0:8:14.97:0,15,121	./.	1/1:2,0:2:2.99:23,3,0	1/1:5,0:5:11.87:80,12,0	1/1:4,0:4:8.96:72,9,0	1/1:5,0:5:11.99:99,12,0	./.	1/1:4,0:4:11.98:98,12,0	1/1:3,0:3:8.99:75,9,0	1/1:1,0:1:2.99:24,3,0	1/1:5,0:5:5.99:50,6,0	1/1:1,4:5:8.99:74,9,0	1/1:8,0:8:17.95:145,18,0	1/1:6,0:6:17.28:121,17,0
chr10	27012873	.	AC	A	13559.71	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=4.430;DP=423;FS=1.032;HRun=1;HaplotypeScore=42.2310;InbreedingCoeff=0.9827;MQ=79.57;MQ0=0;MQRankSum=-2.919;QD=38.09;ReadPosRankSum=6.339;VQSLOD=4.3668;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,13:13:33.11:460,33,0	1/1:0,9:9:27.09:377,27,0	0/0:10,0:10:30.10:0,30,457	0/0:12,0:12:35.77:0,36,457	1/1:0,36:36:99:1337,99,0	1/1:0,19:19:48.16:671,48,0	1/1:0,10:10:27.09:374,27,0	0/0:28,0:28:84.28:0,84,1320	1/1:0,16:16:42.14:587,42,0	1/1:0,22:22:66.22:923,66,0	1/1:0,18:18:48.16:671,48,0	1/1:0,14:14:33.11:461,33,0	1/1:0,14:14:39.13:545,39,0	1/1:0,13:13:39.13:545,39,0	0/0:13,0:13:39.13:0,39,623	1/1:0,13:13:39.13:545,39,0	0/0:4,0:4:12.04:0,12,191	1/1:0,7:7:15.05:209,15,0	1/1:0,16:16:48.16:670,48,0	1/1:0,23:23:69.09:897,69,0	1/1:0,8:8:18.06:252,18,0	1/1:0,17:17:48.16:671,48,0	1/1:0,18:18:48.16:671,48,0	1/1:0,6:6:15.05:210,15,0	1/1:0,16:16:45.15:629,45,0	1/1:0,13:13:39.13:545,39,0	1/1:0,22:22:63.18:859,63,0	1/1:0,13:13:36:452,36,0
chr10	27013443	.	T	TC	4820.08	PASS	AB=1.000;AC=47;AF=0.839;AN=56;BaseQRankSum=6.327;DP=528;FS=0.995;HRun=9;HaplotypeScore=96.0500;InbreedingCoeff=0.8229;MQ=81.66;MQ0=1;MQRankSum=-2.328;QD=11.06;ReadPosRankSum=2.911;VQSLOD=4.1612;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:27:52.97:324,53,0	1/1:8,0:8:14.75:94,15,0	0/0:24,0:23:36.64:0,37,326	0/0:26,0:23:8.16:0,8,193	1/1:21,1:22:46.46:272,46,0	1/1:21,0:21:35.37:227,35,0	1/1:14,0:14:7.89:136,8,0	0/1:23,0:23:15.41:15,0,100	1/1:17,0:17:23.43:156,23,0	1/1:27,1:28:52.16:326,52,0	1/1:9,0:9:17.70:121,18,0	1/1:10,0:10:17.48:108,17,0	1/1:20,1:21:38.22:232,38,0	1/1:17,0:17:23.54:144,24,0	0/0:12,0:12:35.95:0,36,304	1/1:21,0:21:38.25:234,38,0	0/0:30,0:30:18.93:0,19,248	1/1:14,0:14:23.90:187,24,0	1/1:21,0:22:41.06:267,41,0	1/1:15,0:15:28.71:172,29,0	1/1:15,0:15:29.39:178,29,0	1/1:17,0:17:22.99:128,23,0	1/1:11,1:12:23.53:146,24,0	1/1:17,1:18:44.18:276,44,0	1/1:17,0:17:28.92:180,29,0	1/1:20,0:20:35.43:236,35,0	1/1:29,0:29:67.71:420,68,0	1/1:16,2:18:35.44:245,35,0
chr10	27013452	.	C	CCA	14771.24	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-11.718;DP=547;FS=1.855;HRun=0;HaplotypeScore=74.9099;InbreedingCoeff=0.9752;MQ=84.11;MQ0=1;MQRankSum=-4.156;QD=34.92;ReadPosRankSum=5.074;VQSLOD=6.8735;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,32:35:54.19:1001,54,0	1/1:0,7:8:18.02:298,18,0	0/0:26,0:25:48.54:0,49,644	0/0:27,0:24:38.18:0,38,423	1/1:1,16:19:50.45:820,50,0	1/1:0,20:20:36.12:667,36,0	1/1:1,13:16:8.62:437,9,0	0/0:23,0:23:64.77:0,65,576	1/1:0,14:15:23.91:440,24,0	1/1:1,25:26:77.15:1145,77,0	1/1:0,7:9:21.02:330,21,0	1/1:0,13:13:18.06:334,18,0	1/1:1,18:23:38.65:720,39,0	1/1:0,15:16:24.08:446,24,0	0/0:15,0:15:45.05:0,45,545	1/1:0,20:20:39.13:725,39,0	0/0:33,0:33:83.43:0,83,954	1/1:1,12:13:14.84:592,15,0	1/1:2,18:23:65.65:855,66,0	1/1:1,16:18:41.19:556,41,0	1/1:0,14:15:30.10:555,30,0	1/1:0,14:17:41.62:508,42,0	1/1:1,9:12:24:401,24,0	1/1:1,18:20:45.15:835,45,0	1/1:1,21:23:28.33:476,28,0	1/1:1,17:18:48.11:741,48,0	1/1:0,25:26:69.23:1270,69,0	1/1:3,13:16:37.92:618,38,0
chr10	27016091	.	G	GCTT	27158.07	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-0.150;DP=561;FS=0.000;HRun=0;HaplotypeScore=93.2083;InbreedingCoeff=0.9916;MQ=81.37;MQ0=0;MQRankSum=-7.879;QD=53.67;ReadPosRankSum=4.136;VQSLOD=7.0840;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,21:23:54.14:1145,54,0	1/1:1,7:8:21.07:463,21,0	0/0:21,0:21:54.17:0,54,826	0/0:12,0:12:30.07:0,30,446	1/1:1,27:29:72.21:1543,72,0	1/1:2,21:23:57.20:1257,57,0	1/1:0,14:14:42.10:880,42,0	1/1:3,21:26:69.19:1381,69,0	1/1:1,16:18:42.14:927,42,0	1/1:0,20:20:60.18:1259,60,0	1/1:2,20:23:60.12:1231,60,0	1/1:0,13:14:36.12:794,36,0	1/1:1,12:14:36.12:783,36,0	1/1:1,13:14:39.13:860,39,0	0/0:22,0:22:63.20:0,63,989	1/1:1,13:14:35.88:794,36,0	1/1:2,17:20:33.11:728,33,0	1/1:1,8:9:24.08:529,24,0	1/1:6,16:22:42.94:1009,43,0	1/1:2,32:34:86.97:1727,87,0	1/1:1,26:27:78.27:1719,78,0	1/1:1,22:24:66.23:1454,66,0	1/1:2,25:27:63.03:1389,63,0	1/1:4,13:18:29.99:661,30,0	1/1:0,20:20:48.16:1059,48,0	1/1:2,33:36:99:2111,102,0	1/1:1,18:19:51.18:1124,51,0	1/1:0,9:9:15.05:331,15,0
chr10	27018180	.	AAAATAAAT	A	2727.21	PASS	AB=0.944;AC=36;AF=0.783;AN=46;BaseQRankSum=-2.189;DP=210;FS=9.409;HRun=0;HaplotypeScore=56.9229;InbreedingCoeff=0.2690;MQ=64.50;MQ0=2;MQRankSum=-4.307;QD=18.81;ReadPosRankSum=0.494;VQSLOD=0.8634;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:7,1:8:35.85:68,0,36	./.	./.	./.	1/1:8,2:10:6.02:144,6,0	1/1:11,3:14:3.01:74,3,0	1/1:1,2:3:3.01:74,3,0	0/0:17,0:16:3.01:0,3,40	1/1:5,1:6:3.01:74,3,0	1/1:7,3:10:9.03:223,9,0	1/1:4,4:8:12.04:298,12,0	1/1:6,5:11:9.03:223,9,0	1/1:3,3:6:6.02:149,6,0	1/1:4,3:7:3.01:74,3,0	0/0:7,0:7:6.02:0,6,245	1/1:3,1:4:3.01:74,3,0	0/0:5,0:15:26.94:0,27,219	0/1:5,0:5:39.90:40,0,54	1/1:9,3:11:9.03:223,9,0	1/1:4,4:8:9.03:223,9,0	./.	./.	0/0:4,2:6:0:0,0,0	1/1:3,1:4:3.01:74,3,0	1/1:2,2:4:3.01:74,3,0	1/1:2,4:6:12.04:298,12,0	1/1:10,5:15:15.05:372,15,0	1/1:3,1:4:3.01:74,3,0
chr10	27019053	.	GAGAT	G	2232.64	PASS	AB=1.000;AC=35;AF=0.795;AN=44;BaseQRankSum=6.102;DP=597;FS=0.000;HRun=0;HaplotypeScore=137.0430;InbreedingCoeff=0.4400;MQ=71.32;MQ0=7;MQRankSum=1.173;QD=6.00;ReadPosRankSum=1.391;VQSLOD=2.3834;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:29,2:31:24.06:322,24,0	./.	./.	0/0:32,0:22:0.47:0,0,1	1/1:18,8:26:8.92:136,9,0	1/1:11,0:16:3:27,3,0	1/1:14,0:13:8.97:70,9,0	0/0:38,0:38:0:0,0,0	0/0:17,0:17:33.11:0,33,708	1/1:17,6:23:15.04:208,15,0	1/1:9,11:19:12.04:182,12,0	1/1:11,0:16:2.83:27,3,0	./.	1/1:15,0:23:2.94:18,3,0	0/0:27,0:27:33.09:0,33,706	1/1:10,2:16:12.02:143,12,0	1/1:9,0:10:3.83:20,4,0	0/1:13,0:13:17.52:18,0,20	1/1:21,0:21:2.99:24,3,0	1/1:21,0:36:2.49:9,2,0	1/1:20,0:20:5.65:36,6,0	./.	./.	./.	1/1:14,11:26:15.05:227,15,0	1/1:14,14:27:35.22:500,35,0	1/1:12,7:18:12.03:164,12,0	1/1:4,10:14:15.05:227,15,0
chr10	27019125	.	GAT	G	1148.85	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.046;DP=644;FS=3.286;HRun=0;HaplotypeScore=122.0383;InbreedingCoeff=0.9404;MQ=64.25;MQ0=10;MQRankSum=-2.232;QD=27.35;ReadPosRankSum=-3.161;VQSLOD=4.2510;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:61.09:0,61,1150	0/0:10,0:10:18.03:0,18,281	0/0:29,0:19:45.83:0,46,648	0/0:28,0:14:6.07:0,6,449	0/0:31,0:31:84.22:0,84,1452	0/0:17,0:17:42.10:0,42,699	0/0:14,0:14:36:0,36,685	1/1:0,25:25:71.91:857,72,0	0/0:26,0:26:75.22:0,75,1367	0/0:29,0:29:87.16:0,87,1473	0/0:27,0:26:63.17:0,63,1100	0/0:20,0:20:50.48:0,50,778	0/0:27,0:27:60.14:0,60,1049	0/0:31,0:31:66.14:0,66,1134	0/0:22,0:22:63.20:0,63,1160	0/0:19,0:19:48.16:0,48,902	1/1:1,16:16:27.98:413,28,0	0/0:12,0:12:33.06:0,33,591	0/0:17,0:17:51.13:0,51,874	0/0:36,0:36:81.26:0,81,1508	0/0:17,0:17:33.11:0,33,635	0/0:18,0:18:30.05:0,30,539	0/0:26,0:26:42.10:0,42,741	0/0:9,0:8:18.04:0,18,313	0/0:27,0:27:69.20:0,69,1206	0/0:27,0:26:78.22:0,78,1400	0/0:34,0:33:93.04:0,93,1497	0/0:20,0:20:57.18:0,57,1041
chr10	27020572	.	AT	A	1817.05	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=10.916;DP=688;FS=15.333;HRun=2;HaplotypeScore=72.7871;InbreedingCoeff=0.9983;MQ=71.05;MQ0=0;MQRankSum=-2.208;QD=30.28;ReadPosRankSum=-1.424;VQSLOD=1.7479;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:87.20:0,87,1229	0/0:9,0:9:27.09:0,27,404	0/0:23,0:23:52.84:0,53,816	0/0:11,0:11:26.09:0,26,350	0/0:45,0:45:99:0,120,1772	0/0:35,0:35:99:0,99,1424	0/0:15,0:15:45.12:0,45,650	1/1:4,24:28:63.10:794,63,0	0/0:20,0:20:60.20:0,60,899	0/0:38,0:38:99:0,114,1649	0/0:22,0:22:60.18:0,60,879	0/0:25,0:25:75.23:0,75,1078	0/0:25,0:25:72.20:0,72,1018	0/0:28,0:28:81.25:0,81,1190	0/0:19,0:19:57.17:0,57,814	0/0:23,0:23:69.16:0,69,989	1/1:0,32:32:90.21:1145,90,0	0/0:10,0:10:27.09:0,27,404	0/0:16,0:16:45.12:0,45,649	0/0:24,0:24:69.23:0,69,1015	0/0:21,0:21:63.21:0,63,944	0/0:28,0:28:78.26:0,78,1150	0/0:29,0:29:81.27:0,81,1213	0/0:22,0:22:66.18:0,66,962	0/0:27,0:27:81.27:0,81,1195	0/0:28,0:27:84.28:0,84,1254	0/0:36,0:36:99:0,102,1482	0/0:18,0:18:51.17:0,51,764
chr10	27021255	.	AT	A	14800.61	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=7.695;DP=679;FS=1.268;HRun=6;HaplotypeScore=72.2680;InbreedingCoeff=0.9996;MQ=60.65;MQ0=1;MQRankSum=0.988;QD=26.38;ReadPosRankSum=6.290;VQSLOD=4.7422;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,22:28:63.16:677,63,0	1/1:0,9:9:27.07:290,27,0	0/0:19,0:17:48.09:0,48,601	0/0:15,0:15:36.07:0,36,428	1/1:3,30:33:84.14:888,84,0	1/1:2,29:31:78.20:838,78,0	1/1:1,14:15:39.10:419,39,0	0/0:33,0:33:90.27:0,90,1147	1/1:2,19:21:45.11:484,45,0	1/1:3,21:24:66.16:704,66,0	1/1:4,27:31:61.03:647,61,0	1/1:1,16:17:42.11:451,42,0	1/1:3,14:17:35.66:387,36,0	1/1:1,26:27:75.19:806,75,0	0/0:26,0:26:72.21:0,72,915	1/1:1,19:20:48.12:516,48,0	0/0:25,0:24:72.22:0,72,931	1/1:2,17:19:48.12:516,48,0	1/1:3,17:20:51.11:539,51,0	1/1:4,33:37:93.02:972,93,0	1/1:3,22:25:60.15:645,60,0	1/1:0,14:14:33.08:355,33,0	1/1:3,33:36:87.22:935,87,0	1/1:1,18:19:45.11:484,45,0	1/1:1,22:23:57.14:613,57,0	1/1:3,34:37:99:1057,99,0	1/1:2,32:34:87.22:935,87,0	1/1:4,20:24:60.15:645,60,0
chr10	27022008	.	AGT	A	20967.05	PASS	AB=0.539;AC=44;AF=0.786;AN=56;BaseQRankSum=-6.600;DP=652;FS=12.601;HRun=0;HaplotypeScore=97.5121;InbreedingCoeff=0.8030;MQ=69.92;MQ0=3;MQRankSum=5.158;QD=42.36;ReadPosRankSum=8.037;VQSLOD=5.6857;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,28:26:72.24:1100,72,0	1/1:0,10:10:27.09:413,27,0	0/0:42,0:34:99:0,99,1784	0/0:32,0:21:63.18:0,63,1058	1/1:0,25:25:69.23:1056,69,0	1/1:1,32:33:69.37:1354,69,0	1/1:1,11:12:33.11:505,33,0	0/0:38,0:36:99:0,108,1872	1/1:0,12:12:36.12:551,36,0	1/1:0,26:26:78.25:1173,78,0	1/1:0,27:27:81.28:1240,81,0	1/1:0,27:27:81.28:1240,81,0	1/1:0,24:24:69.23:1057,69,0	1/1:0,22:22:66.22:1011,66,0	0/0:21,0:21:63.22:0,63,1216	1/1:0,30:30:90.31:1378,90,0	0/0:24,0:24:72.25:0,72,1315	0/1:5,23:28:47.08:972,0,47	1/1:1,18:19:54.16:801,54,0	1/1:0,16:16:45.15:689,45,0	1/1:1,19:20:54.18:827,54,0	1/1:0,21:21:60.20:919,60,0	1/1:1,18:19:57.19:868,57,0	0/1:1,8:9:6.63:255,0,7	1/1:0,24:24:63.21:964,63,0	1/1:0,26:26:72.22:1078,72,0	1/1:0,31:31:81.28:1240,81,0	1/1:0,6:6:18.06:276,18,0
chr10	27022617	.	AT	A	1007.65	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.204;DP=415;FS=2.917;HRun=8;HaplotypeScore=48.3688;InbreedingCoeff=0.9735;MQ=70.20;MQ0=0;MQRankSum=-2.529;QD=20.99;ReadPosRankSum=-2.308;VQSLOD=2.8242;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:29.08:0,29,392	0/0:5,0:5:12.04:0,12,145	0/0:14,0:11:30.04:0,30,330	0/0:10,0:9:22.61:0,23,245	0/0:30,0:30:84.23:0,84,992	0/0:17,0:17:51.16:0,51,616	0/0:8,0:8:24.07:0,24,290	1/1:4,28:32:81.12:782,81,0	0/0:13,0:13:39.12:0,39,471	0/0:10,0:10:27.96:0,28,319	0/0:17,0:17:51.16:0,51,616	0/0:10,0:10:30.09:0,30,362	0/0:12,0:12:30.09:0,30,362	0/0:12,0:12:33.10:0,33,398	0/0:7,0:7:21.06:0,21,252	0/0:10,0:10:30.09:0,30,362	1/1:2,14:16:36.06:347,36,0	0/0:14,0:14:36.83:0,37,467	0/0:19,0:19:57.17:0,57,689	0/0:20,0:20:60.17:0,60,714	0/0:16,0:16:36.10:0,36,424	0/0:13,0:13:33.09:0,33,398	0/0:12,0:12:36.08:0,36,419	0/0:6,0:6:18.06:0,18,217	0/0:16,0:16:45.14:0,45,544	0/0:22,0:22:66.20:0,66,797	0/0:28,0:28:72.22:0,72,866	0/0:11,0:11:33.10:0,33,391
chr10	27022692	.	GT	G	236.11	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=4.834;DP=455;FS=1.926;HRun=8;HaplotypeScore=107.5206;InbreedingCoeff=0.9101;MQ=68.58;MQ0=7;MQRankSum=-3.775;QD=7.62;ReadPosRankSum=-2.911;VQSLOD=1.2063;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:16:26.54:0,27,216	0/0:6,0:6:14.81:0,15,122	0/0:46,0:16:28.50:0,29,308	0/0:37,0:19:9.22:0,9,237	0/0:21,0:21:53.64:0,54,410	0/0:16,0:17:38.74:0,39,306	0/0:12,0:12:23.41:0,23,167	1/1:4,15:15:32.79:250,33,0	0/0:8,0:8:20.39:0,20,133	0/0:11,0:12:25.51:0,26,147	0/0:18,0:20:44.42:0,44,297	0/0:13,0:13:35.18:0,35,239	0/0:15,0:15:33.28:0,33,320	0/0:6,0:6:14.60:0,15,126	0/0:15,0:14:39.12:0,39,471	0/0:11,0:11:29.43:0,29,215	1/1:6,5:9:14.01:104,14,0	0/0:10,0:11:20.58:0,21,141	0/0:12,0:10:20.78:0,21,182	0/0:29,0:29:77.10:0,77,517	0/0:11,0:12:20.25:0,20,130	0/0:2,0:7:14.97:0,15,132	0/0:17,0:17:34.75:0,35,249	0/0:6,0:6:11.74:0,12,71	0/0:18,0:17:44.23:0,44,351	0/0:4,0:16:40.96:0,41,274	0/0:25,0:25:70.21:0,70,583	0/0:11,0:11:29.22:0,29,228
chr10	27022703	.	GT	G	421.87	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=4.755;DP=453;FS=3.847;HRun=1;HaplotypeScore=100.0923;InbreedingCoeff=0.8028;MQ=65.94;MQ0=8;MQRankSum=-3.503;QD=6.11;ReadPosRankSum=-1.138;VQSLOD=0.2505;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:12:30.04:0,30,397	0/0:6,0:6:12.04:0,12,164	0/0:45,0:13:9.99:0,10,211	0/1:38,0:19:0.86:1,0,245	0/0:23,0:23:68.75:0,69,857	0/0:18,0:18:45.54:0,46,554	0/0:11,0:11:29.53:0,30,331	1/1:1,18:13:36.08:384,36,0	0/0:8,0:8:23.91:0,24,298	0/0:13,0:13:39.02:0,39,499	0/0:20,0:19:47.80:0,48,675	0/0:11,0:11:32.75:0,33,405	0/0:15,0:15:41.79:0,42,553	0/0:8,0:8:19.59:0,20,228	0/0:15,0:14:38.16:0,38,567	0/0:10,0:10:30.09:0,30,420	1/1:5,7:10:16.27:156,16,0	0/0:12,0:12:27.70:0,28,324	0/0:15,0:13:33.04:0,33,426	0/0:32,0:32:74.59:0,75,1151	0/0:10,0:10:23.16:0,23,274	0/0:6,0:6:12.04:0,12,149	0/0:17,0:17:45.82:0,46,599	0/0:5,0:5:11.87:0,12,142	0/0:15,0:14:37.33:0,37,462	0/0:14,0:14:42.10:0,42,547	0/0:28,0:27:67.69:0,68,985	0/0:13,0:13:35.29:0,35,430
chr10	27023462	.	A	AT	511.25	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=-5.140;DP=405;FS=1.698;HRun=9;HaplotypeScore=91.8615;InbreedingCoeff=0.7361;MQ=70.54;MQ0=0;MQRankSum=-0.470;QD=12.78;ReadPosRankSum=-5.941;VQSLOD=2.1654;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:7:13.24:0,13,105	0/0:11,0:11:25.90:0,26,223	0/0:9,0:9:5.82:0,6,56	0/1:9,0:8:10.96:11,0,100	0/0:22,0:22:53.61:0,54,435	0/0:14,0:14:38.96:0,39,331	0/0:11,0:11:25.88:0,26,221	1/1:4,12:16:36.07:381,36,0	0/0:14,0:14:30.56:0,31,272	0/0:21,0:21:56.94:0,57,481	0/0:28,0:28:60.65:0,61,589	0/0:14,0:14:31.27:0,31,279	0/0:16,0:16:37.52:0,38,312	0/0:13,0:13:34.20:0,34,278	0/0:17,0:17:44.98:0,45,390	0/0:14,0:14:38.93:0,39,324	1/1:2,12:15:23.90:246,24,0	0/0:17,0:17:40.52:0,41,336	0/0:12,0:12:29.97:0,30,253	0/0:22,0:22:62.93:0,63,530	0/0:5,0:5:14.99:0,15,128	0/0:11,0:11:25.28:0,25,225	0/0:12,0:12:29.96:0,30,252	0/0:7,0:7:17.99:0,18,153	0/0:14,0:14:24.38:0,24,206	0/0:19,0:19:30.39:0,30,277	0/0:26,0:25:63.18:0,63,557	0/0:9,0:9:20.96:0,21,178
chr10	27025802	.	T	TAAAAAAGAAA	39172.29	PASS	AB=1.000;AC=49;AF=0.907;AN=54;BaseQRankSum=-3.241;DP=508;FS=7.286;HRun=0;HaplotypeScore=132.4747;InbreedingCoeff=0.7166;MQ=50.46;MQ0=1;MQRankSum=-7.466;QD=80.93;ReadPosRankSum=0.937;VQSLOD=4.7665;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,9:23:42.14:2032,42,0	1/1:3,4:8:9.03:458,9,0	0/0:10,0:9:18.05:0,18,535	0/1:7,0:7:4.96:5,0,245	1/1:16,21:38:72.25:3150,72,0	1/1:8,17:26:45.15:2200,45,0	1/1:4,4:10:15.05:622,15,0	1/1:24,0:33:42.14:1398,42,0	1/1:3,11:14:27.09:1374,27,0	1/1:10,14:26:54.17:2291,54,0	1/1:13,22:35:69.24:3365,69,0	1/1:7,10:17:27.09:1286,27,0	1/1:7,17:26:48.16:2361,48,0	1/1:7,13:21:39.13:1816,39,0	0/0:13,0:13:36.12:0,36,1008	1/1:4,10:14:33.11:1628,33,0	1/1:10,0:17:21.07:840,21,0	1/1:8,0:8:3.01:40,3,0	1/1:9,6:16:39.13:1635,39,0	1/1:14,21:37:72.25:3229,72,0	./.	1/1:7,5:13:27.05:1039,27,0	1/1:10,13:24:39.13:1847,39,0	1/1:1,4:5:6.02:305,6,0	1/1:6,6:12:21.07:943,21,0	1/1:7,15:22:51.17:2301,51,0	1/1:11,14:27:45.15:2244,45,0	1/1:0,5:5:15.05:764,15,0
chr10	27026415	.	GT	G	1120.16	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.548;DP=625;FS=0.550;HRun=10;HaplotypeScore=62.3802;InbreedingCoeff=0.9587;MQ=72.75;MQ0=0;MQRankSum=0.461;QD=16.72;ReadPosRankSum=-1.664;VQSLOD=3.5674;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:45:99:0,114,1200	0/0:10,0:10:21.06:0,21,232	0/0:15,0:14:23.38:0,23,258	0/0:11,0:10:14.85:0,15,130	0/0:34,0:34:90.17:0,90,952	0/0:19,0:19:54.13:0,54,589	0/0:15,0:15:39.09:0,39,422	1/1:9,29:38:77.93:673,78,0	0/0:24,0:24:69.14:0,69,737	0/0:21,0:21:51.11:0,51,552	0/0:16,0:17:41.95:0,42,446	0/0:25,0:26:72.02:0,72,771	0/0:26,0:26:78.01:0,78,824	0/0:24,0:24:60.16:0,60,657	0/0:21,0:21:46.37:0,46,501	0/0:26,0:27:75.04:0,75,811	1/1:5,24:29:63.28:568,63,0	0/0:18,1:19:25.03:0,25,481	0/0:22,0:22:45.12:0,45,498	0/0:24,0:27:71.81:0,72,738	0/0:23,1:27:65.84:0,66,692	0/0:15,0:16:44.92:0,45,455	0/0:26,0:26:64.02:0,64,685	0/0:21,0:24:59.81:0,60,611	0/0:16,0:18:50.97:0,51,545	0/0:19,0:19:39.10:0,39,425	0/0:20,0:20:51.12:0,51,548	0/0:5,0:5:9.02:0,9,100
chr10	27027680	.	T	TTA	8743.58	PASS	AC=48;AF=0.889;AN=54;BaseQRankSum=-3.956;DP=282;FS=6.166;HRun=0;HaplotypeScore=34.6756;InbreedingCoeff=0.6507;MQ=79.43;MQ0=1;MQRankSum=-2.898;QD=36.58;ReadPosRankSum=1.121;VQSLOD=5.9164;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,9:11:30.10:507,30,0	1/1:0,3:2:6.02:87,6,0	0/0:12,0:6:0.79:0,1,42	0/0:22,0:13:9.01:0,9,100	1/1:1,9:10:21.07:357,21,0	1/1:3,16:19:42.14:715,42,0	./.	1/1:11,28:40:87.27:1395,87,0	1/1:1,6:7:18.06:306,18,0	1/1:1,10:11:33.11:533,33,0	1/1:0,4:4:9.03:153,9,0	1/1:1,4:5:9.03:153,9,0	1/1:2,6:8:9.03:153,9,0	1/1:0,6:6:15.05:255,15,0	0/0:8,0:8:18.06:0,18,234	1/1:1,6:7:12.04:204,12,0	1/1:3,15:18:36.12:612,36,0	1/1:0,7:7:21.07:357,21,0	1/1:2,18:20:54.17:882,54,0	1/1:2,11:13:30.10:498,30,0	1/1:2,6:8:12.04:204,12,0	1/1:2,0:2:6.02:98,6,0	1/1:1,4:5:9.03:153,9,0	1/1:0,1:1:3.01:51,3,0	1/1:3,6:9:9.03:153,9,0	1/1:3,8:11:24.08:407,24,0	1/1:1,7:8:15.05:255,15,0	1/1:1,5:6:15.05:255,15,0
chr10	27028317	.	G	GT	1521.42	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=-10.605;DP=511;FS=1.856;HRun=8;HaplotypeScore=45.9295;InbreedingCoeff=0.7778;MQ=69.25;MQ0=0;MQRankSum=0.879;QD=23.05;ReadPosRankSum=-2.840;VQSLOD=2.9114;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:90.04:0,90,824	0/0:6,0:6:15.01:0,15,137	0/0:9,0:9:8.71:0,9,157	0/1:3,0:3:8.01:8,0,17	0/0:25,0:26:65.01:0,65,571	0/0:13,0:13:33.01:0,33,302	0/0:10,0:10:27.01:0,27,247	1/1:8,23:31:66.16:740,66,0	0/0:14,0:14:33.01:0,33,302	0/0:33,0:33:93.05:0,93,851	0/0:23,0:23:63:0,63,567	0/0:10,0:10:30.02:0,30,275	0/0:15,0:15:39:0,39,352	0/0:23,0:23:66:0,66,595	0/0:16,0:16:42.02:0,42,384	0/0:11,0:11:30.02:0,30,275	1/1:4,28:32:78.23:900,78,0	0/0:14,0:14:42:0,42,378	0/0:20,0:20:44.95:0,45,400	0/0:24,0:24:54.02:0,54,494	0/0:11,0:11:33.02:0,33,302	0/0:14,0:14:42:0,42,375	0/0:16,0:16:39.02:0,39,357	0/0:7,0:7:18.01:0,18,165	0/0:35,0:35:96.02:0,96,868	0/0:32,0:32:84.04:0,84,766	0/0:20,0:20:51.02:0,51,467	0/0:8,0:8:24.01:0,24,220
chr10	27028569	.	C	CT	1442.76	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=10.584;DP=575;FS=3.555;HRun=7;HaplotypeScore=57.5080;InbreedingCoeff=0.7910;MQ=70.81;MQ0=0;MQRankSum=-1.932;QD=23.65;ReadPosRankSum=-3.511;VQSLOD=2.4567;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,108,1043	0/0:8,0:8:15.02:0,15,145	0/0:11,0:11:4.85:0,5,146	0/1:7,0:7:2.71:3,0,102	0/0:31,0:31:87.11:0,87,832	0/0:26,0:26:72.09:0,72,688	0/0:16,0:16:39.04:0,39,370	1/1:5,23:30:72.67:844,73,0	0/0:21,0:21:57.08:0,57,546	0/0:33,0:33:96.12:0,96,914	0/0:21,0:21:57.08:0,57,545	0/0:21,0:21:57.05:0,57,538	0/0:23,0:23:66.10:0,66,637	0/0:22,0:22:51.03:0,51,477	0/0:20,0:20:48.05:0,48,458	0/0:14,0:14:39.05:0,39,372	1/1:3,21:24:60.18:719,60,0	0/0:13,0:13:35.99:0,36,331	0/0:19,0:19:48.07:0,48,459	0/0:17,0:17:48.03:0,48,447	0/0:9,0:9:21.03:0,21,203	0/0:9,0:9:24.04:0,24,232	0/0:19,0:19:42.03:0,42,396	0/0:17,0:17:44.97:0,45,415	0/0:38,0:38:99:0,108,1024	0/0:22,0:22:63.09:0,63,605	0/0:35,0:35:99:0,102,951	0/0:10,0:10:30:0,30,280
chr10	27030809	.	GA	G	1171.03	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-4.024;DP=546;FS=1.319;HRun=5;HaplotypeScore=76.4012;InbreedingCoeff=0.9902;MQ=86.37;MQ0=0;MQRankSum=-2.428;QD=24.40;ReadPosRankSum=-2.557;VQSLOD=1.8569;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:78.26:0,78,1067	0/0:10,0:10:21.06:0,21,274	0/0:24,0:24:66.20:0,66,861	0/0:12,0:11:21.07:0,21,283	0/0:40,0:40:99:0,108,1477	0/0:18,0:17:51.12:0,51,636	0/0:15,0:15:45.15:0,45,615	1/1:6,27:33:81.23:918,81,0	0/0:14,0:14:42.14:0,42,575	0/0:26,0:26:72.23:0,72,971	0/0:19,0:19:57.19:0,57,779	0/0:10,0:10:30.10:0,30,410	0/0:18,0:18:54.18:0,54,734	0/0:16,0:16:45.15:0,45,615	0/0:31,0:31:90.30:0,90,1231	0/0:17,0:17:48.15:0,48,641	1/1:0,15:15:33.09:374,33,0	0/0:11,0:11:27.09:0,27,369	0/0:15,0:15:45.15:0,45,616	0/0:29,0:29:81.26:0,81,1092	0/0:10,0:10:30.09:0,30,395	0/0:13,0:13:39.13:0,39,534	0/0:25,0:25:69.22:0,69,930	0/0:10,0:10:30.10:0,30,410	0/0:24,0:24:72.20:0,72,965	0/0:19,0:19:57.17:0,57,753	0/0:36,0:36:99:0,105,1391	0/0:6,0:6:18.06:0,18,246
chr10	27031551	.	CT	C	824.23	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.221;DP=464;FS=0.000;HRun=8;HaplotypeScore=44.0779;InbreedingCoeff=0.8869;MQ=61.74;MQ0=15;MQRankSum=-3.847;QD=18.73;ReadPosRankSum=-1.661;VQSLOD=2.6090;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:74.12:0,74,825	0/0:9,0:8:24.07:0,24,290	0/0:9,0:8:14.91:0,15,159	0/0:1,0:1:3.01:0,3,36	0/0:33,1:33:61.29:0,61,1009	0/0:14,0:14:33.10:0,33,399	0/0:6,0:6:18.05:0,18,215	1/1:4,21:25:59.95:551,60,0	0/0:13,0:12:30.09:0,30,360	0/0:18,0:18:51.16:0,51,616	0/0:22,0:22:63.19:0,63,761	0/0:13,0:13:33.09:0,33,388	0/0:13,0:12:33.05:0,33,381	0/0:13,0:12:33.09:0,33,389	0/0:12,0:12:30.08:0,30,351	0/0:16,0:16:36.10:0,36,424	1/1:4,15:19:41.95:394,42,0	0/0:17,0:15:42.13:0,42,507	0/0:15,0:15:39.11:0,39,459	0/0:26,0:26:72.22:0,72,870	0/0:12,0:12:24.07:0,24,290	0/0:12,0:11:30.08:0,30,352	0/0:13,0:13:30.09:0,30,362	0/0:17,0:15:39.11:0,39,460	0/0:22,0:22:63.17:0,63,741	0/0:17,0:14:39.11:0,39,461	0/0:28,0:27:78.21:0,78,917	0/0:17,1:17:11.22:0,11,440
chr10	27032013	.	CA	C	718.92	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.881;DP=563;FS=7.245;HRun=8;HaplotypeScore=51.2871;InbreedingCoeff=0.9141;MQ=83.80;MQ0=0;MQRankSum=0.204;QD=22.47;ReadPosRankSum=-1.243;VQSLOD=3.2952;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:45.14:0,45,544	0/0:10,0:10:30.09:0,30,362	0/0:16,0:16:24.18:0,24,315	0/0:18,0:18:30.89:0,31,317	0/0:22,0:22:66.20:0,66,797	0/0:25,0:25:60.18:0,60,725	0/0:15,0:15:36.11:0,36,435	1/1:2,17:19:51.08:493,51,0	0/0:20,0:20:54.16:0,54,644	0/0:37,0:37:99:0,99,1196	0/0:21,0:21:57.17:0,57,689	0/0:18,0:18:51.16:0,51,615	0/0:30,0:30:84.26:0,84,1015	0/0:16,0:16:36.11:0,36,435	0/0:23,0:23:69.21:0,69,834	0/0:22,0:22:63.19:0,63,761	1/1:1,12:13:36.05:348,36,0	0/0:20,0:20:60.18:0,60,724	0/0:14,0:15:35.98:0,36,413	0/0:40,0:40:99:0,105,1268	0/0:13,0:13:36.11:0,36,435	0/0:18,0:18:45.14:0,45,543	0/0:29,0:29:87.26:0,87,1040	0/0:10,0:10:24.07:0,24,282	0/0:21,0:21:57.17:0,57,689	0/0:26,0:26:75.22:0,75,897	0/0:28,0:28:81.22:0,81,964	0/0:1,0:1:3.01:0,3,36
chr10	27032951	.	G	GTTTGT	26314.93	PASS	AB=0.550;AC=45;AF=0.804;AN=56;BaseQRankSum=-11.675;DP=704;FS=4.867;HRun=0;HaplotypeScore=91.7944;InbreedingCoeff=0.8750;MQ=59.72;MQ0=7;MQRankSum=-1.673;QD=46.99;ReadPosRankSum=4.167;VQSLOD=4.9130;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,19:28:14.38:1091,14,0	1/1:0,12:12:24.08:686,24,0	0/0:39,0:27:75.16:0,75,1149	0/0:25,0:16:36.12:0,36,585	1/1:1,32:37:87.29:2243,87,0	1/1:1,23:26:35.52:1171,36,0	1/1:0,23:26:15.05:457,15,0	0/0:31,0:31:81.23:0,81,1514	1/1:0,26:32:42.14:1330,42,0	1/1:0,17:19:57.19:1449,57,0	1/1:1,20:23:57.18:1266,57,0	1/1:1,17:21:33.11:956,33,0	1/1:0,29:37:48.16:1521,48,0	1/1:1,19:22:33.11:1045,33,0	0/0:33,0:33:99:0,99,1915	1/1:1,14:18:15.05:476,15,0	0/0:16,0:16:48.16:0,48,923	1/1:4,14:18:21.07:618,21,0	1/1:1,16:20:60.18:1258,60,0	1/1:2,24:33:69.20:1693,69,0	1/1:2,23:26:36.11:1066,36,0	1/1:1,15:21:27.08:728,27,0	1/1:2,18:23:45.15:1363,45,0	0/1:4,16:21:43.76:532,0,44	1/1:1,20:24:42.14:1278,42,0	1/1:1,18:24:63.19:1522,63,0	1/1:2,27:33:54.19:1711,54,0	1/1:0,12:12:27.09:856,27,0
chr10	27033092	.	C	CT	1345.68	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-2.231;DP=552;FS=3.245;HRun=1;HaplotypeScore=62.1757;InbreedingCoeff=0.9349;MQ=74.80;MQ0=0;MQRankSum=0.327;QD=37.38;ReadPosRankSum=-3.163;VQSLOD=2.7814;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:36.09:0,36,447	0/0:12,0:12:36.12:0,36,467	0/0:9,0:9:22.86:0,23,256	0/0:11,0:12:33.06:0,33,392	0/0:30,0:30:87.24:0,87,1085	0/0:25,0:25:75.22:0,75,946	0/0:16,0:16:48.14:0,48,605	1/1:2,29:31:84.27:1239,84,0	0/0:24,0:24:72.22:0,72,920	0/0:28,0:28:81.25:0,81,1029	0/0:29,0:29:84.26:0,84,1075	0/0:22,0:22:63.20:0,63,817	0/0:23,0:23:69.21:0,69,876	0/0:24,0:24:72.23:0,72,929	0/0:33,0:33:99:0,99,1284	0/0:21,0:21:63.20:0,63,806	1/1:0,5:5:15.05:225,15,0	0/0:7,0:7:18.06:0,18,233	0/0:12,0:12:33.11:0,33,427	0/0:25,0:25:72.22:0,72,921	0/0:19,0:19:54.18:0,54,701	0/0:20,0:20:51.16:0,51,662	0/0:25,0:25:75.24:0,75,972	0/0:19,0:19:54.15:0,54,672	0/0:15,0:15:45.15:0,45,584	0/0:27,0:27:81.26:0,81,1052	0/0:23,0:23:66.21:0,66,856	0/0:4,0:4:6.02:0,6,78
chr10	27033538	.	A	AT	11889.27	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-8.665;DP=495;FS=0.000;HRun=9;HaplotypeScore=42.0825;InbreedingCoeff=0.9519;MQ=79.78;MQ0=0;MQRankSum=-3.232;QD=26.66;ReadPosRankSum=2.210;VQSLOD=4.8464;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,16:20:39.11:431,39,0	1/1:1,10:11:27.07:299,27,0	0/0:12,0:12:26.61:0,27,207	0/0:12,0:12:17.85:0,18,144	1/1:0,22:22:66.03:688,66,0	1/1:1,21:22:65.39:704,65,0	1/1:2,13:15:27.07:299,27,0	1/1:8,16:25:50.94:527,51,0	1/1:3,10:13:27.05:287,27,0	1/1:2,19:21:57.12:610,57,0	1/1:0,14:14:39.11:431,39,0	1/1:2,10:12:24.06:266,24,0	1/1:3,16:19:19.07:439,19,0	1/1:1,18:19:51.14:564,51,0	0/0:25,0:25:62.95:0,63,543	1/1:2,9:11:27.07:299,27,0	1/1:4,22:26:17.08:645,17,0	1/1:1,13:14:36.10:398,36,0	1/1:5,19:25:36.95:618,37,0	1/1:2,19:22:60.13:649,60,0	1/1:0,9:9:27.07:299,27,0	1/1:0,10:10:30.08:332,30,0	1/1:4,19:23:31.10:571,31,0	1/1:1,14:16:38.97:413,39,0	1/1:1,20:21:57.15:631,57,0	1/1:4,14:18:39.11:431,39,0	1/1:2,30:32:90.24:994,90,0	1/1:4,2:6:6.02:66,6,0
chr10	27034326	.	T	TG	2439.90	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=-9.160;DP=597;FS=3.174;HRun=0;HaplotypeScore=56.4191;InbreedingCoeff=0.8287;MQ=87.88;MQ0=0;MQRankSum=0.052;QD=41.35;ReadPosRankSum=-2.211;VQSLOD=3.3049;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:90.25:0,90,1192	0/0:8,0:8:24.04:0,24,313	0/0:25,0:25:69.20:0,69,931	0/0:24,0:23:52.45:0,52,722	0/0:24,0:24:69.18:0,69,927	0/0:25,0:25:66.21:0,66,907	0/0:14,0:14:36.12:0,36,503	1/1:1,36:37:99:1698,108,0	0/0:21,0:21:60.20:0,60,839	0/0:18,0:18:54.18:0,54,755	0/0:20,0:20:60.20:0,60,839	0/0:21,0:21:63.21:0,63,880	0/0:18,0:18:51.17:0,51,713	0/0:26,0:26:78.24:0,78,1045	0/0:21,0:21:60.18:0,60,806	0/0:18,0:18:51.16:0,51,698	1/1:0,19:19:54.18:862,54,0	0/1:3,0:3:4.53:5,0,53	0/0:25,0:25:75.25:0,75,1046	0/0:32,0:32:93.30:0,93,1285	0/0:17,0:17:51.16:0,51,698	0/0:19,0:19:57.18:0,57,782	0/0:20,0:20:60.19:0,60,822	0/0:12,0:12:36.12:0,36,503	0/0:20,0:20:54.18:0,54,754	0/0:38,0:38:99:0,114,1594	0/0:29,0:29:87.27:0,87,1183	0/0:12,0:12:36.12:0,36,502
chr10	27034396	.	G	GT	1831.64	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-9.048;DP=566;FS=2.402;HRun=7;HaplotypeScore=57.9020;InbreedingCoeff=0.9676;MQ=70.90;MQ0=0;MQRankSum=0.292;QD=29.54;ReadPosRankSum=-5.335;VQSLOD=1.7238;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:69.11:0,69,666	0/0:11,0:11:30.05:0,30,290	0/0:10,0:10:27.04:0,27,259	0/0:15,1:16:42.03:0,42,394	0/0:28,0:28:78.10:0,78,747	0/0:22,0:22:57.03:0,57,539	0/0:11,0:11:24.01:0,24,224	1/1:2,44:46:99:1567,132,0	0/0:21,0:21:60.07:0,60,569	0/0:27,0:27:69.10:0,69,666	0/0:20,0:20:57.08:0,57,546	0/0:20,0:20:54.07:0,54,515	0/0:14,0:14:35.99:0,36,336	0/0:22,0:22:60.08:0,60,575	0/0:26,0:26:75.10:0,75,715	0/0:10,0:10:24.04:0,24,232	1/1:6,10:16:36:386,36,0	0/0:3,0:3:9.01:0,9,87	0/0:19,0:19:33.30:0,33,481	0/0:28,0:28:75.09:0,75,713	0/0:20,0:20:54.09:0,54,521	0/0:21,0:21:57.06:0,57,540	0/0:17,0:17:48.07:0,48,463	0/0:16,0:16:39.06:0,39,377	0/0:22,0:22:62.98:0,63,586	0/0:37,0:37:84.10:0,84,801	0/0:24,0:24:54.07:0,54,521	0/0:14,0:14:42.05:0,42,398
chr10	27034474	.	G	GTCTC	1221.97	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=4.524;DP=621;FS=1.543;HRun=0;HaplotypeScore=148.6514;InbreedingCoeff=0.8694;MQ=68.07;MQ0=3;MQRankSum=-2.374;QD=27.15;ReadPosRankSum=-5.537;VQSLOD=2.0002;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:30.10:0,30,514	0/0:11,0:11:24.08:0,24,409	0/0:41,0:34:18.45:0,18,799	0/0:45,0:33:37.92:0,38,695	0/0:29,0:29:66.20:0,66,1087	0/0:16,0:16:33.11:0,33,566	0/0:20,0:20:27.09:0,27,461	1/1:15,15:34:56.95:1100,57,0	0/0:22,0:22:45.15:0,45,765	0/0:27,0:28:68.89:0,69,1089	0/0:17,0:17:39.13:0,39,651	0/0:21,0:21:48.11:0,48,789	0/0:28,0:28:60.20:0,60,1013	0/0:20,0:20:42.12:0,42,667	0/0:14,0:14:30.10:0,30,507	0/0:24,0:24:60.20:0,60,1012	1/1:5,5:11:11.77:238,12,0	0/0:6,0:6:13.37:0,13,253	0/0:21,0:21:45.15:0,45,763	0/0:22,0:22:54.15:0,54,881	0/0:20,0:20:42.12:0,42,660	0/0:17,0:17:45.15:0,45,772	0/0:20,0:20:42.14:0,42,728	0/0:17,0:17:24:0,24,394	0/0:26,0:26:54.18:0,54,926	0/0:32,0:32:75.19:0,75,1253	0/0:30,0:29:78.26:0,78,1319	0/0:11,0:10:1.82:0,2,338
chr10	27034524	.	CATCTATCT	C	10973.96	PASS	AB=1.000;AC=45;AF=0.833;AN=54;BaseQRankSum=5.594;DP=464;FS=1.353;HRun=0;HaplotypeScore=187.5185;InbreedingCoeff=0.7691;MQ=58.00;MQ0=3;MQRankSum=-4.496;QD=28.58;ReadPosRankSum=3.314;VQSLOD=4.5981;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,7:13:9.03:231,9,0	1/1:2,9:11:18.06:436,18,0	0/0:20,0:16:17.72:0,18,347	0/1:15,0:14:7.26:7,0,25	1/1:9,9:18:15.04:333,15,0	1/1:6,9:16:27.09:672,27,0	1/1:5,8:14:21.03:482,21,0	0/0:33,0:35:63.18:0,63,1531	1/1:10,5:15:17.92:239,18,0	1/1:11,10:21:39.12:883,39,0	1/1:8,6:14:21.02:333,21,0	1/1:8,10:18:33.03:633,33,0	1/1:9,15:24:27.05:586,27,0	1/1:6,11:17:39.07:842,39,0	0/0:17,0:17:42.13:0,42,1620	1/1:11,11:22:29.97:599,30,0	0/0:6,0:7:6.02:0,6,115	./.	1/1:5,5:10:15.05:385,15,0	1/1:10,12:23:30.05:641,30,0	1/1:6,1:7:6.01:102,6,0	1/1:4,11:15:18.06:435,18,0	1/1:9,6:15:17.69:410,18,0	1/1:8,4:13:8.90:174,9,0	1/1:12,12:24:24.08:591,24,0	1/1:15,15:30:66.07:1370,66,0	1/1:7,10:16:21.05:486,21,0	1/1:11,1:11:6:101,6,0
chr10	27034561	.	C	CATAT	1562.39	PASS	AB=1.000;AC=6;AF=0.111;AN=54;BaseQRankSum=-6.950;DP=484;FS=0.000;HRun=0;HaplotypeScore=270.8213;InbreedingCoeff=0.6248;MQ=53.32;MQ0=1;MQRankSum=0.930;QD=17.75;ReadPosRankSum=-3.805;VQSLOD=2.3490;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:24.08:0,24,340	0/0:10,0:10:18.06:0,18,276	0/1:29,0:15:32.54:33,0,154	0/1:14,0:5:0.62:1,0,8	0/0:19,0:18:11.93:0,12,136	0/0:28,0:28:45.14:0,45,616	0/0:15,0:15:33.04:0,33,457	1/1:34,3:36:66.68:1198,67,0	0/0:15,0:15:18.06:0,18,269	0/0:20,0:20:55.19:0,55,708	0/0:12,0:12:9.03:0,9,136	0/0:18,0:18:36.12:0,36,548	0/0:20,0:20:29.96:0,30,364	0/0:15,0:16:39.12:0,39,530	0/0:16,0:16:42.11:0,42,667	0/0:17,0:17:30.10:0,30,444	1/1:2,6:8:21:458,21,0	./.	0/0:19,0:19:48.04:0,48,716	0/0:25,0:25:32.94:0,33,452	0/0:6,0:6:12.04:0,12,179	0/0:21,0:21:21.04:0,21,281	0/0:17,0:17:9.03:0,9,118	0/0:11,0:11:12.04:0,12,146	0/0:26,0:26:36.12:0,36,503	0/0:25,0:25:66.18:0,66,988	0/0:20,0:20:43.34:0,43,581	0/0:5,0:5:9.03:0,9,141
chr10	27034571	.	CATAT	C	9724.59	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=3.393;DP=486;FS=2.123;HRun=0;HaplotypeScore=226.1957;InbreedingCoeff=0.8364;MQ=55.26;MQ0=0;MQRankSum=-4.424;QD=24.62;ReadPosRankSum=1.296;VQSLOD=4.8465;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,12:16:24.08:375,24,0	1/1:2,7:9:18.06:315,18,0	0/0:21,0:15:14.41:0,14,122	0/0:14,0:4:2.36:0,2,25	1/1:5,15:20:11.55:142,12,0	1/1:0,27:27:45.15:664,45,0	1/1:6,10:16:33.11:513,33,0	0/0:24,0:31:50.38:0,50,707	1/1:7,10:17:20.86:312,21,0	1/1:4,19:23:44.68:770,45,0	1/1:3,9:12:9.50:158,10,0	1/1:3,15:19:36.12:614,36,0	1/1:10,9:19:29.93:411,30,0	1/1:3,12:15:39.13:592,39,0	0/0:15,0:15:39.12:0,39,916	1/1:4,12:17:32.47:502,32,0	0/0:4,0:9:18.03:0,18,310	1/1:1,0:1:3.01:35,3,0	1/1:3,17:20:47.97:793,48,0	1/1:10,18:28:30.23:479,30,0	1/1:2,4:6:9.03:142,9,0	1/1:3,15:18:21.07:319,21,0	1/1:4,13:17:8.94:127,9,0	1/1:7,6:13:9.03:109,9,0	1/1:8,20:28:33.11:499,33,0	1/1:8,18:26:60.20:1041,60,0	1/1:10,13:23:40.86:654,41,0	1/1:0,5:5:9.03:158,9,0
chr10	27034610	.	A	ATGTGTGCGTG	14846.60	PASS	AB=0.873;AC=47;AF=0.839;AN=56;BaseQRankSum=0.852;DP=636;FS=18.108;HRun=0;HaplotypeScore=264.1053;InbreedingCoeff=0.4980;MQ=43.19;MQ0=14;MQRankSum=-4.718;QD=26.65;ReadPosRankSum=-0.300;VQSLOD=2.8016;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:14,8:27:17.98:461,18,0	1/1:8,5:14:17.92:467,18,0	0/0:28,0:9:17.07:0,17,195	0/0:34,0:14:29.15:0,29,312	1/1:17,2:20:8.48:233,8,0	1/1:27,2:29:11.79:685,12,0	0/1:8,10:21:9.91:474,0,10	0/1:25,0:24:99:269,0,104	1/1:12,9:23:26.80:938,27,0	1/1:26,0:26:56.90:753,57,0	1/1:13,5:23:11.62:357,12,0	1/1:18,11:31:30.03:1075,30,0	1/1:16,4:20:35.42:972,35,0	1/1:20,1:21:12.20:325,12,0	0/0:15,0:17:47.83:0,48,1028	1/1:13,8:23:27.15:1224,27,0	0/1:12,0:12:50.91:128,0,51	1/1:4,0:3:7.27:86,7,0	1/1:13,0:13:35.70:338,36,0	1/1:13,13:26:21.02:666,21,0	1/1:3,12:24:3:25,3,0	1/1:20,3:25:19.88:735,20,0	1/1:18,2:19:14.87:459,15,0	1/1:8,6:20:2.76:112,3,0	1/1:24,3:29:23.73:812,24,0	1/1:17,17:41:91.01:1729,91,0	1/1:14,8:25:37.54:912,38,0	1/1:13,0:13:35.96:613,36,0
chr10	27034611	.	T	TGTGTGC	7574.06	PASS	AB=0.989;AC=45;AF=0.804;AN=56;BaseQRankSum=6.170;DP=636;FS=13.301;HRun=0;HaplotypeScore=259.4122;InbreedingCoeff=0.5719;MQ=43.17;MQ0=14;MQRankSum=-4.861;QD=13.92;ReadPosRankSum=2.481;VQSLOD=2.4719;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:27:17.34:253,17,0	1/1:13,0:13:17.92:261,18,0	0/0:28,0:9:17.07:0,17,195	0/0:34,0:14:29.19:0,29,334	1/1:20,0:20:8.22:64,8,0	0/1:28,0:29:13.28:269,0,13	0/1:21,0:21:9.91:187,0,10	0/1:26,0:24:47.01:47,0,175	1/1:24,0:24:30.04:541,30,0	1/1:27,0:27:49.74:394,50,0	1/1:23,0:23:11.70:181,12,0	1/1:31,0:31:32.05:496,32,0	1/1:20,1:20:14.48:611,14,0	1/1:21,0:21:11.79:181,12,0	0/0:17,0:17:48.11:0,48,846	1/1:22,0:22:25.07:563,25,0	0/0:13,0:13:14.87:0,15,123	1/1:4,0:3:7.82:68,8,0	1/1:13,0:13:32.48:296,32,0	1/1:27,0:26:23:303,23,0	1/1:23,0:23:3:25,3,0	1/1:25,0:25:23.15:316,23,0	1/1:20,0:19:14.57:164,15,0	1/1:20,0:20:4.86:45,5,0	1/1:29,1:29:23.69:435,24,0	1/1:39,1:40:49.29:1063,49,0	1/1:24,0:24:30.05:523,30,0	1/1:12,1:13:29.43:287,29,0
chr10	27038499	.	ATTAT	A	8634.39	PASS	AC=44;AF=0.815;AN=54;BaseQRankSum=7.740;DP=363;FS=1.442;HRun=0;HaplotypeScore=64.4441;InbreedingCoeff=0.7359;MQ=59.19;MQ0=0;MQRankSum=-0.159;QD=28.97;ReadPosRankSum=3.423;VQSLOD=4.7671;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,3:6:3.01:50,3,0	1/1:1,7:8:14.67:249,15,0	0/0:2,0:1:2.04:0,2,6	0/0:6,0:5:6.02:0,6,108	1/1:7,14:21:33.11:532,33,0	1/1:4,11:15:33.11:549,33,0	1/1:1,5:6:12.04:200,12,0	0/0:28,0:28:54.19:0,54,1266	1/1:2,6:8:6.02:100,6,0	1/1:1,12:13:33.11:549,33,0	1/1:5,15:20:39.13:647,39,0	1/1:4,5:9:6.02:100,6,0	1/1:3,10:13:15.05:250,15,0	1/1:2,11:13:24.08:400,24,0	0/0:8,0:8:12.04:0,12,296	1/1:5,4:9:9.03:150,9,0	0/0:21,0:20:39.07:0,39,872	1/1:5,13:18:30.10:499,30,0	1/1:10,8:18:21.06:325,21,0	1/1:6,16:22:48.16:799,48,0	./.	1/1:0,1:1:3.01:50,3,0	1/1:3,7:10:15.05:250,15,0	1/1:2,1:3:3.01:50,3,0	1/1:1,21:22:54.18:899,54,0	1/1:2,18:20:54.18:890,54,0	1/1:14,17:31:48.16:798,48,0	1/1:5,7:12:17.68:299,18,0
chr10	27039305	.	G	GTTTT	14969.77	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-3.562;DP=546;FS=6.925;HRun=11;HaplotypeScore=94.2703;InbreedingCoeff=0.9324;MQ=72.77;MQ0=0;MQRankSum=-3.868;QD=33.27;ReadPosRankSum=-2.715;VQSLOD=3.1769;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,17:21:39.13:828,39,0	1/1:1,2:4:7.58:104,8,0	0/0:20,0:18:23.67:0,24,266	0/0:10,0:10:11.95:0,12,151	1/1:6,11:24:57.03:960,57,0	1/1:5,16:24:33.11:655,33,0	1/1:7,6:16:24.08:479,24,0	0/0:25,0:25:43.75:0,44,594	1/1:10,15:26:24.08:546,24,0	1/1:4,19:24:60.21:1267,60,0	1/1:10,14:27:63.03:1008,63,0	1/1:6,8:14:16.85:312,17,0	1/1:4,14:19:20.96:406,21,0	1/1:4,8:14:18.06:364,18,0	0/0:15,0:15:33.04:0,33,449	1/1:5,13:18:24.01:504,24,0	0/0:26,0:26:72.19:0,72,976	1/1:3,5:11:15.05:335,15,0	1/1:8,9:21:48.16:902,48,0	1/1:13,22:39:79.51:1594,80,0	1/1:9,0:9:18.04:260,18,0	1/1:7,13:22:42.08:702,42,0	1/1:3,14:20:39.13:826,39,0	1/1:3,10:13:23.89:508,24,0	1/1:7,18:30:39.13:868,39,0	1/1:5,11:17:36.12:708,36,0	1/1:11,18:31:41.35:820,41,0	1/1:5,0:5:4.44:14,4,0
chr10	27039663	.	GA	G	16820.28	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=15.064;DP=702;FS=0.000;HRun=5;HaplotypeScore=107.3910;InbreedingCoeff=0.9976;MQ=80.01;MQ0=0;MQRankSum=-5.898;QD=29.88;ReadPosRankSum=5.999;VQSLOD=4.0594;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,32:32:93.27:1054,93,0	1/1:1,8:9:18.05:204,18,0	0/0:17,0:17:42.14:0,42,563	0/0:28,0:28:81.16:0,81,1031	1/1:1,21:22:54.11:598,54,0	1/1:2,28:30:84.24:952,84,0	1/1:1,22:23:63.18:714,63,0	0/0:37,0:37:99:0,105,1363	1/1:1,27:28:78.22:884,78,0	1/1:2,22:24:66:722,66,0	1/1:3,31:34:78.21:875,78,0	1/1:2,32:34:84.24:952,84,0	1/1:2,30:32:78.22:884,78,0	1/1:1,30:31:87.25:986,87,0	0/0:38,0:38:99:0,111,1517	1/1:1,21:22:60.17:678,60,0	0/0:19,0:19:57.16:0,57,746	1/1:0,10:10:24.07:270,24,0	1/1:1,25:26:75.07:795,75,0	1/1:1,27:28:72.20:813,72,0	1/1:2,20:22:51.15:578,51,0	1/1:3,21:24:60.17:675,60,0	1/1:0,25:25:72.21:816,72,0	1/1:0,23:23:63.18:714,63,0	1/1:0,18:18:51.15:578,51,0	1/1:1,20:21:62.66:683,63,0	1/1:0,31:31:90.26:1020,90,0	1/1:0,14:14:33.09:374,33,0
chr10	27040201	.	T	TA	20887.02	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-13.236;DP=652;FS=2.183;HRun=2;HaplotypeScore=57.2464;InbreedingCoeff=0.9993;MQ=83.75;MQ0=0;MQRankSum=-4.578;QD=39.19;ReadPosRankSum=4.529;VQSLOD=5.2573;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,19:19:48.16:719,48,0	1/1:0,13:13:24.08:359,24,0	0/0:19,0:19:57.18:0,57,737	0/0:19,0:19:57.17:0,57,709	1/1:2,31:33:90.30:1349,90,0	1/1:1,27:28:81.27:1214,81,0	1/1:2,17:19:39.13:585,39,0	0/0:28,0:28:84.26:0,84,1066	1/1:1,21:22:63.21:944,63,0	1/1:1,18:20:57.17:820,57,0	1/1:1,20:21:48.16:720,48,0	1/1:1,26:27:78.26:1169,78,0	1/1:2,29:31:78.26:1169,78,0	1/1:0,23:24:54.18:803,54,0	0/0:34,0:34:99:0,99,1284	1/1:1,19:20:45.15:675,45,0	0/0:19,0:19:54.18:0,54,700	1/1:2,9:11:30.07:426,30,0	1/1:2,15:17:48.11:674,48,0	1/1:1,31:32:90.30:1349,90,0	1/1:0,23:23:60.20:899,60,0	1/1:1,26:27:69.23:1034,69,0	1/1:0,21:21:57.19:854,57,0	1/1:0,19:19:54.18:809,54,0	1/1:0,30:30:84.28:1259,84,0	1/1:0,18:18:54.18:807,54,0	1/1:1,44:45:99:1754,117,0	1/1:0,13:13:33.11:495,33,0
chr10	27040632	.	C	CAAA	9878.03	PASS	AB=0.720;AC=49;AF=0.875;AN=56;BaseQRankSum=-1.492;DP=576;FS=3.880;HRun=13;HaplotypeScore=104.4785;InbreedingCoeff=0.5000;MQ=73.07;MQ0=0;MQRankSum=-4.400;QD=18.46;ReadPosRankSum=-2.123;VQSLOD=3.5780;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:10,9:23:23.52:320,24,0	1/1:1,9:12:23.93:316,24,0	0/1:17,0:13:4.93:5,0,111	0/0:14,0:14:20.14:0,20,147	1/1:11,21:34:71.81:968,72,0	1/1:7,9:21:30.08:441,30,0	1/1:4,11:17:24.08:357,24,0	0/1:11,0:33:26.22:117,0,26	1/1:6,6:16:19.53:217,20,0	1/1:8,9:18:31.43:448,31,0	1/1:7,18:32:74.90:918,75,0	1/1:4,9:14:12.79:130,13,0	1/1:13,0:13:9.03:134,9,0	1/1:8,10:21:20.98:251,21,0	0/0:22,0:25:31.30:0,31,338	1/1:2,8:11:20.04:264,20,0	0/1:4,0:19:16.35:29,0,16	1/1:7,5:12:7.74:100,8,0	1/1:9,4:19:40.63:544,41,0	1/1:8,18:32:72.02:981,72,0	1/1:5,1:7:7.27:89,7,0	1/1:6,17:26:54.10:740,54,0	1/1:4,13:20:37.27:537,37,0	1/1:5,14:25:20.93:252,21,0	1/1:8,8:24:36.04:450,36,0	1/1:6,14:26:58.65:795,59,0	1/1:11,16:29:24.11:324,24,0	1/1:8,4:13:9.03:150,9,0
chr10	27044484	.	A	AT	17429.12	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-11.650;DP=587;FS=4.555;HRun=0;HaplotypeScore=54.4377;InbreedingCoeff=0.9980;MQ=77.95;MQ0=0;MQRankSum=-4.140;QD=35.72;ReadPosRankSum=5.050;VQSLOD=4.3155;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,17:17:45.15:643,45,0	1/1:1,8:9:20.98:274,21,0	0/0:22,0:20:47.21:0,47,524	0/0:13,0:13:29.88:0,30,315	1/1:0,32:32:83.94:1074,84,0	1/1:0,34:34:93.31:1329,93,0	1/1:0,11:11:27.09:386,27,0	0/0:26,0:26:75.22:0,75,960	1/1:1,16:17:48.16:686,48,0	1/1:1,23:24:69.12:889,69,0	1/1:0,23:23:63.13:874,63,0	1/1:0,23:23:48.16:686,48,0	1/1:0,29:29:63.21:900,63,0	1/1:1,18:19:51.12:721,51,0	0/0:23,0:23:69.21:0,69,926	1/1:0,13:13:35.83:514,36,0	0/0:15,0:15:41.93:0,42,552	1/1:1,12:13:30.10:428,30,0	1/1:5,11:16:45.12:582,45,0	1/1:0,35:35:98.95:1267,99,0	1/1:0,9:9:27.09:386,27,0	1/1:0,25:25:68.89:881,69,0	1/1:1,27:28:61.62:897,62,0	1/1:0,16:16:36.12:514,36,0	1/1:0,20:20:51.17:729,51,0	1/1:1,26:27:78.20:1057,78,0	1/1:0,39:39:93.31:1329,93,0	1/1:0,9:9:27.09:386,27,0
chr10	27044674	.	GC	G	20588.21	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=17.870;DP=687;FS=11.670;HRun=1;HaplotypeScore=178.7308;InbreedingCoeff=0.9847;MQ=97.14;MQ0=0;MQRankSum=-8.107;QD=39.37;ReadPosRankSum=8.407;VQSLOD=1.9154;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,15:15:42.10:565,42,0	1/1:0,6:6:18.06:252,18,0	0/0:36,0:36:99:0,99,1454	0/0:33,0:33:93.22:0,93,1346	1/1:0,29:29:81.16:1086,81,0	1/1:0,30:30:87.29:1217,87,0	1/1:0,16:16:45.15:629,45,0	0/0:37,0:37:99:0,108,1644	1/1:0,22:22:54.18:755,54,0	1/1:0,26:26:75.25:1049,75,0	1/1:0,26:26:78.26:1090,78,0	1/1:0,25:25:66.22:923,66,0	1/1:0,32:32:93.31:1297,93,0	1/1:0,26:26:72.24:1007,72,0	0/0:40,0:40:99:0,120,1844	1/1:0,24:24:72.24:1007,72,0	0/0:18,0:18:54.18:0,54,862	1/1:0,12:12:36.12:503,36,0	1/1:0,27:27:75.24:1031,75,0	1/1:0,19:19:54.18:755,54,0	1/1:0,32:32:87.29:1216,87,0	1/1:0,25:25:72.24:1007,72,0	1/1:0,21:21:63.21:881,63,0	1/1:0,15:15:42.14:587,42,0	1/1:0,38:38:99:1384,99,0	1/1:0,23:23:69.23:965,69,0	1/1:0,30:30:90.30:1258,90,0	1/1:0,4:4:9.03:126,9,0
chr10	27045182	.	GA	G	984.69	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.178;DP=485;FS=9.542;HRun=9;HaplotypeScore=76.6188;InbreedingCoeff=0.8967;MQ=79.40;MQ0=0;MQRankSum=0.858;QD=20.51;ReadPosRankSum=-3.775;VQSLOD=2.2553;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:33.10:0,33,381	0/0:10,0:10:27.07:0,27,302	0/0:18,0:17:34.32:0,34,355	0/0:13,0:13:24.07:0,24,266	0/0:30,1:31:75.17:0,75,836	0/0:21,0:21:48.14:0,48,553	0/0:12,0:13:29.92:0,30,323	1/1:4,33:37:95.82:859,96,0	0/0:7,0:7:21.06:0,21,242	0/0:28,0:28:75.19:0,75,866	0/0:33,0:33:60.04:0,60,639	0/0:20,0:20:39.12:0,39,450	0/0:9,0:9:18.05:0,18,208	0/0:19,0:19:45.07:0,45,493	0/0:22,0:22:57.17:0,57,658	0/0:16,0:16:33.07:0,33,367	1/1:1,10:11:27.01:247,27,0	0/0:5,0:5:14.99:0,15,158	0/0:18,0:18:45.12:0,45,503	0/0:19,0:19:48.10:0,48,539	0/0:5,0:5:12.04:0,12,138	0/0:12,0:12:31.34:0,31,349	0/0:17,1:18:11.52:0,12,379	0/0:2,0:2:6.02:0,6,69	0/0:23,0:23:51.14:0,51,580	0/0:19,0:19:51.07:0,51,559	0/0:33,0:34:78.03:0,78,859	0/0:7,0:7:15.04:0,15,173
chr10	27045227	.	T	TTTTTA	15943.14	PASS	AC=44;AF=0.815;AN=54;BaseQRankSum=0.177;DP=462;FS=0.000;HRun=0;HaplotypeScore=89.9155;InbreedingCoeff=0.8327;MQ=76.78;MQ0=1;MQRankSum=-7.461;QD=46.08;ReadPosRankSum=2.968;VQSLOD=4.4406;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,7:13:15.05:376,15,0	1/1:4,6:10:18.06:472,18,0	0/0:30,0:23:23.62:0,24,292	0/0:16,0:10:9.03:0,9,147	1/1:10,20:33:63.21:1635,63,0	1/1:4,12:16:21.07:613,21,0	1/1:7,2:10:12.04:323,12,0	0/0:32,0:32:66.22:0,66,1212	1/1:1,6:7:21.07:579,21,0	1/1:11,14:26:45.14:1148,45,0	1/1:4,21:26:63.21:1691,63,0	1/1:8,12:21:24.08:670,24,0	1/1:4,8:13:15.05:388,15,0	1/1:9,12:21:39.13:1063,39,0	0/0:20,0:20:45.15:0,45,864	1/1:1,11:14:36.12:1006,36,0	0/0:16,0:16:39.13:0,39,739	1/1:4,0:4:3.01:56,3,0	1/1:9,8:17:30.09:703,30,0	1/1:5,12:18:36.12:994,36,0	1/1:2,1:3:6.02:175,6,0	1/1:4,0:4:3.01:55,3,0	1/1:6,10:17:24.55:670,25,0	./.	1/1:6,6:13:18.06:495,18,0	1/1:5,14:19:45.15:1229,45,0	1/1:11,19:30:54.18:1515,54,0	1/1:4,6:10:3.01:88,3,0
chr10	27045385	.	T	TAGATAGAC	6622.13	PASS	AB=0.758;AC=44;AF=0.815;AN=54;BaseQRankSum=-4.916;DP=539;FS=4.142;HRun=0;HaplotypeScore=121.3277;InbreedingCoeff=0.4476;MQ=56.01;MQ0=9;MQRankSum=-1.880;QD=14.24;ReadPosRankSum=2.075;VQSLOD=3.7822;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:26:22.54:425,23,0	1/1:1,8:9:12.04:463,12,0	0/0:18,0:11:30:0,30,278	0/0:12,0:9:27.05:0,27,277	1/1:17,0:17:29.86:244,30,0	1/1:2,24:27:5.93:149,6,0	1/1:14,0:14:5.89:269,6,0	0/1:34,0:33:35.33:35,0,453	1/1:9,4:15:25.55:457,26,0	1/1:19,0:19:51.01:493,51,0	1/1:1,20:24:9.03:334,9,0	1/1:0,25:26:9.03:283,9,0	1/1:0,14:16:2.68:126,3,0	1/1:1,1:20:3.01:108,3,0	0/0:23,0:23:59.96:0,60,644	1/1:1,20:25:11.91:420,12,0	0/1:17,0:17:5.05:5,0,99	1/1:1,0:15:12.03:128,12,0	1/1:17,0:15:38.90:532,39,0	1/1:2,1:30:37.54:283,38,0	1/1:11,0:11:14.62:170,15,0	0/1:1,11:13:0.08:0,0,0	1/1:1,11:13:2.66:123,3,0	./.	1/1:1,15:22:6.02:204,6,0	1/1:2,17:22:59.83:930,60,0	0/1:1,22:23:14.94:250,0,15	1/1:2,1:10:9.02:193,9,0
chr10	27046030	.	G	GA	946.69	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-7.868;DP=642;FS=9.066;HRun=9;HaplotypeScore=65.4363;InbreedingCoeff=0.9142;MQ=62.21;MQ0=4;MQRankSum=1.352;QD=20.14;ReadPosRankSum=-0.854;VQSLOD=3.4419;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,102,880	0/0:6,0:6:12:0,12,104	0/0:33,0:17:29.73:0,30,232	0/0:21,0:16:23.88:0,24,196	0/0:26,0:27:40.72:0,41,502	0/0:22,0:22:47.97:0,48,416	0/0:16,0:16:35.97:0,36,308	1/1:5,14:19:42.06:436,42,0	0/0:16,0:16:35.98:0,36,313	0/0:21,1:23:10.82:0,11,311	0/0:16,0:17:35.02:0,35,292	0/0:32,2:35:7.19:0,7,511	0/0:23,0:24:62.02:0,62,527	0/0:17,0:17:38.97:0,39,335	0/0:31,0:31:80.97:0,81,703	0/0:27,0:27:71.95:0,72,621	1/1:3,25:28:32.96:632,33,0	0/0:15,0:15:35.99:0,36,312	0/0:23,0:22:41.94:0,42,361	0/0:36,0:36:83.93:0,84,721	0/0:24,0:24:53.94:0,54,460	0/0:18,0:18:44.99:0,45,391	0/0:18,0:18:41.98:0,42,364	0/0:22,0:22:53.98:0,54,468	0/0:21,1:22:14.79:0,15,357	0/0:24,0:24:50.97:0,51,443	0/0:25,1:25:20.77:0,21,406	0/0:14,0:14:38.95:0,39,327
chr10	27048381	.	TAAAA	T	1480.76	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=4.737;DP=639;FS=0.579;HRun=14;HaplotypeScore=119.5376;InbreedingCoeff=0.9303;MQ=77.81;MQ0=1;MQRankSum=-2.787;QD=27.42;ReadPosRankSum=1.351;VQSLOD=2.5802;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:16:39.13:0,39,785	0/0:14,0:16:42.14:0,42,939	0/0:32,0:27:45.67:0,46,760	0/0:21,0:19:5.09:0,5,206	0/0:26,0:32:81.17:0,81,1442	0/0:23,0:23:57.19:0,57,1158	0/0:20,0:21:54.19:0,54,1220	1/1:2,22:24:63.03:821,63,0	0/0:19,0:22:63.20:0,63,1151	0/0:21,0:27:73.79:0,74,1420	0/0:26,0:26:63.19:0,63,1271	0/0:21,0:22:57.18:0,57,1097	0/0:23,0:28:60.19:0,60,1189	0/0:8,0:14:33.11:0,33,685	0/0:23,0:24:66.22:0,66,1420	0/0:22,0:25:75.24:0,75,1606	1/1:2,28:30:25.33:780,25,0	0/0:13,0:13:33.09:0,33,618	0/0:16,0:17:42.12:0,42,774	0/0:25,0:28:73.42:0,73,1585	0/0:8,0:11:24.08:0,24,494	0/0:23,0:25:66.19:0,66,1304	0/0:20,0:25:72.24:0,72,1545	0/0:20,0:23:60.20:0,60,1230	0/0:31,0:36:81.28:0,81,1774	0/0:18,0:21:54.16:0,54,1039	0/0:22,0:27:75.25:0,75,1523	0/0:6,0:6:15.05:0,15,227
chr10	27051309	.	GAC	G	3480.99	PASS	AB=0.862;AC=39;AF=0.750;AN=52;BaseQRankSum=-0.257;DP=602;FS=1.466;HRun=0;HaplotypeScore=108.5731;InbreedingCoeff=-0.1731;MQ=62.70;MQ0=15;MQRankSum=0.586;QD=6.53;ReadPosRankSum=0.260;VQSLOD=3.1786;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:28,7:33:1.82:240,2,0	./.	./.	0/1:31,0:16:0:0,0,0	1/1:15,2:17:9.20:114,9,0	0/1:23,4:26:0.96:162,0,1	0/1:25,5:30:29.02:216,0,29	1/1:19,1:20:3.01:33,3,0	1/1:11,2:13:8.86:80,9,0	1/1:16,4:18:29.55:283,30,0	1/1:15,0:15:3.31:15,3,0	0/1:20,4:24:23.99:55,0,24	1/1:22,2:23:5.17:102,5,0	1/1:19,3:21:11.67:151,12,0	0/0:22,1:23:2.79:0,3,369	1/1:14,6:19:23.54:243,24,0	0/1:20,9:28:23.82:271,0,24	0/1:13,1:15:37.58:88,0,38	0/1:14,0:9:11.67:46,0,12	1/1:10,3:13:11.50:95,12,0	0/1:32,4:29:20.61:92,0,21	1/1:9,2:11:7.50:49,8,0	0/1:12,3:15:23.54:114,0,24	0/1:30,10:38:31.03:289,0,31	1/1:17,6:22:29.13:316,29,0	0/1:15,7:22:4.78:281,0,5	1/1:9,2:9:11.75:115,12,0	1/1:3,0:3:5.21:29,5,0
chr10	27051344	.	A	ACG	2076.32	PASS	AB=0.970;AC=25;AF=0.446;AN=56;BaseQRankSum=1.375;DP=603;FS=1.592;HRun=0;HaplotypeScore=134.2060;InbreedingCoeff=-0.5981;MQ=49.51;MQ0=30;MQRankSum=1.520;QD=3.78;ReadPosRankSum=-2.687;VQSLOD=1.8672;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:42,0:40:97.16:97,0,97	0/0:3,0:3:4.58:0,5,43	0/0:13,0:1:2.97:0,3,20	0/0:16,0:5:5.65:0,6,32	0/1:15,2:17:24.43:33,0,24	0/1:21,2:22:10.61:66,0,11	0/1:30,0:27:94.05:146,0,94	0/1:17,0:16:16.82:86,0,17	0/1:12,1:12:10.95:43,0,11	0/1:30,0:26:22.75:136,0,23	0/1:14,0:14:16.78:17,0,57	0/1:22,0:22:35.26:35,0,39	0/1:23,1:23:21.81:55,0,22	0/1:21,1:20:1.51:126,0,2	0/0:22,0:20:12.64:0,13,447	0/1:19,1:18:2.21:137,0,2	0/1:24,2:25:73.02:281,0,73	0/1:21,1:20:57.01:57,0,69	0/1:19,0:14:43.02:54,0,43	0/1:15,1:15:7.67:83,0,8	0/1:51,0:42:56.99:57,0,143	0/1:9,0:9:8.05:8,0,31	0/1:20,1:21:25.21:25,0,44	0/1:46,0:43:74.65:187,0,75	0/1:25,0:24:5.35:190,0,5	0/1:23,2:25:80.28:201,0,80	1/1:10,2:9:9.82:89,10,0	0/1:3,0:3:10.59:18,0,11
chr10	27051354	.	ACG	A	4238.35	PASS	AB=0.912;AC=28;AF=0.500;AN=56;BaseQRankSum=-0.412;DP=642;FS=0.873;HRun=0;HaplotypeScore=128.8624;InbreedingCoeff=-0.3306;MQ=50.51;MQ0=32;MQRankSum=3.258;QD=8.23;ReadPosRankSum=2.481;VQSLOD=4.7331;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:40,0:37:99:232,0,162	0/1:4,0:4:15.14:15,0,102	0/0:24,0:5:14.77:0,15,162	0/0:31,0:10:21.16:0,21,233	0/1:10,7:17:43.68:213,0,44	0/1:21,5:25:99:165,0,121	0/1:25,1:23:99:142,0,141	0/0:24,0:23:16.05:0,16,214	1/1:14,1:13:8.94:107,9,0	0/1:34,0:31:99:466,0,104	1/1:16,0:16:3.53:16,4,0	0/1:19,5:24:47.94:182,0,48	0/1:21,2:22:41.85:230,0,42	1/1:27,1:24:18.25:253,18,0	0/0:22,1:21:32.11:0,32,690	0/1:15,1:14:10.10:63,0,10	0/0:25,0:24:45.51:0,46,387	1/1:16,7:21:9.91:292,10,0	0/1:16,1:13:48.37:113,0,48	0/1:11,5:15:17.33:177,0,17	0/1:53,1:46:53.96:343,0,54	0/1:8,1:8:14.86:15,0,94	0/1:19,1:20:52.15:138,0,52	0/1:33,10:40:99:402,0,157	0/1:23,0:22:60.17:142,0,60	0/1:24,2:26:30.31:451,0,30	0/1:12,1:10:31.50:35,0,31	1/1:2,0:2:5.98:46,6,0
chr10	27051356	.	G	GCA	6891.22	PASS	AB=0.687;AC=30;AF=0.536;AN=56;BaseQRankSum=-4.122;DP=661;FS=10.631;HRun=0;HaplotypeScore=126.9681;InbreedingCoeff=-0.1780;MQ=50.75;MQ0=31;MQRankSum=4.503;QD=13.03;ReadPosRankSum=1.223;VQSLOD=4.1570;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:16,24:37:60.31:317,0,60	0/1:2,3:5:39.03:39,0,63	0/0:27,0:5:14.99:0,15,141	0/0:33,0:12:14.89:0,15,173	0/1:17,1:18:12.28:242,0,12	0/1:19,7:25:49.52:336,0,50	0/1:14,16:27:81.50:317,0,81	0/0:7,0:22:14.12:0,14,155	0/1:8,7:13:14.39:237,0,14	0/1:14,19:32:10.50:765,0,10	0/1:5,11:16:28.90:39,0,29	0/1:11,13:24:12.91:247,0,13	0/1:11,13:23:6.15:335,0,6	1/1:11,16:23:34.93:516,35,0	0/0:21,0:20:28.28:0,28,471	1/1:10,6:14:14.65:158,15,0	0/0:23,0:24:29.40:0,29,250	1/1:16,6:20:26.21:413,26,0	0/1:10,6:12:15.89:213,0,16	1/1:14,2:15:3.24:220,3,0	0/1:21,34:49:30.23:475,0,30	0/1:5,4:8:60.19:61,0,60	0/1:11,10:21:18.53:223,0,19	0/1:32,11:40:81.26:668,0,81	0/1:11,12:23:35.51:242,0,36	1/1:11,14:28:9.12:639,9,0	1/1:6,7:11:5.91:96,6,0	1/1:3,1:4:9:96,9,0
chr10	27051477	.	C	CAGAT	23990.93	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-4.105;DP=678;FS=8.139;HRun=0;HaplotypeScore=165.0217;InbreedingCoeff=0.8980;MQ=59.94;MQ0=15;MQRankSum=1.129;QD=42.69;ReadPosRankSum=5.080;VQSLOD=5.0507;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,29:39:63.15:1696,63,0	1/1:0,6:6:9.03:242,9,0	0/0:37,0:12:19.49:0,19,286	0/0:48,0:24:5.94:0,6,379	1/1:5,28:33:34.99:968,35,0	1/1:1,25:26:46.47:1267,46,0	1/1:2,17:19:30.10:794,30,0	1/1:4,18:22:54.06:725,54,0	1/1:2,13:15:27.09:718,27,0	1/1:5,20:26:64.81:1305,65,0	1/1:5,13:18:27.04:684,27,0	1/1:8,17:25:39.13:1049,39,0	1/1:7,26:33:54.18:1404,54,0	1/1:6,20:26:57.19:1445,57,0	0/0:30,0:30:78.25:0,78,1413	1/1:2,16:18:36.12:926,36,0	1/1:4,12:16:24.52:722,25,0	1/1:2,18:20:33.11:846,33,0	1/1:2,9:8:21.07:503,21,0	1/1:6,17:23:24.01:601,24,0	1/1:16,16:32:43.94:1278,44,0	1/1:5,22:27:33.03:889,33,0	1/1:3,17:20:20.63:565,21,0	1/1:12,23:35:62.70:1509,63,0	1/1:1,16:17:30.10:808,30,0	1/1:4,26:31:90.27:1981,90,0	1/1:2,13:15:36.07:905,36,0	1/1:0,2:2:6.02:162,6,0
chr10	27051521	.	G	GAGAGAC	2226.70	PASS	AB=1.000;AC=36;AF=0.643;AN=56;BaseQRankSum=0.366;DP=589;FS=0.534;HRun=0;HaplotypeScore=226.2873;InbreedingCoeff=-0.1313;MQ=57.36;MQ0=21;MQRankSum=-3.502;QD=4.67;ReadPosRankSum=-4.225;VQSLOD=1.0390;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:28:41.31:41,0,101	1/1:7,0:7:0.68:21,1,0	0/1:40,0:9:3.91:4,0,94	0/0:58,0:26:2.99:0,3,24	1/1:27,0:27:8.14:47,8,0	0/1:21,0:21:38.74:39,0,134	0/1:17,0:17:25.13:25,0,28	1/1:49,0:47:69.04:883,69,0	0/1:3,0:3:11.81:12,0,34	0/1:19,0:19:64.70:65,0,71	0/1:16,0:16:28.24:39,0,28	0/1:18,0:18:32.41:32,0,63	0/0:20,0:20:10.22:0,10,300	0/1:20,0:18:51.93:52,0,93	0/0:34,0:34:75.13:0,75,1431	0/1:17,0:17:46.12:46,0,137	1/1:9,4:13:18.02:513,18,0	0/1:11,0:11:6.16:6,0,119	0/1:16,0:12:9.63:10,0,108	1/1:17,0:17:18.31:133,18,0	1/1:21,0:19:15.93:89,16,0	1/1:28,0:28:13.16:78,13,0	1/1:23,0:23:18.86:98,19,0	1/1:22,0:21:2.90:17,3,0	1/1:8,0:8:8.59:46,9,0	0/1:21,0:21:54.35:54,0,174	0/1:14,0:14:6.82:7,0,130	1/1:1,0:1:3.01:36,3,0
chr10	27051540	.	AGAGACG	A	10553.60	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=9.113;DP=566;FS=3.166;HRun=0;HaplotypeScore=196.0710;InbreedingCoeff=0.9276;MQ=53.92;MQ0=12;MQRankSum=-4.484;QD=27.92;ReadPosRankSum=-1.296;VQSLOD=4.5442;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:17,7:24:24.01:423,24,0	1/1:3,4:7:15.04:294,15,0	0/0:48,0:22:55.56:0,56,673	0/0:55,0:34:31.89:0,32,332	1/1:13,9:22:20.91:281,21,0	1/1:7,8:15:28.47:615,28,0	1/1:13,8:21:39.04:554,39,0	0/0:42,0:39:56.17:0,56,1220	1/1:7,1:8:6.50:205,7,0	1/1:14,3:17:38.88:532,39,0	1/1:7,10:17:14.99:280,15,0	1/1:3,9:12:24.05:510,24,0	1/1:10,9:19:48.09:811,48,0	1/1:11,14:23:57.01:915,57,0	0/0:32,0:32:89.82:0,90,2526	1/1:6,9:15:42.06:745,42,0	0/0:11,0:11:20.73:0,21,269	1/1:5,3:8:5.95:273,6,0	1/1:13,3:15:35.62:493,36,0	1/1:11,9:20:38.94:589,39,0	1/1:16,6:20:18.51:315,19,0	1/1:12,10:22:26.80:411,27,0	1/1:8,11:19:24.04:460,24,0	1/1:16,7:22:11.85:119,12,0	1/1:5,4:9:20.99:288,21,0	1/1:10,7:17:47.98:713,48,0	1/1:10,6:16:33:542,33,0	1/1:4,0:4:12.02:185,12,0
chr10	27051576	.	G	GCA	4310.61	PASS	AB=0.969;AC=50;AF=0.893;AN=56;BaseQRankSum=4.469;DP=582;FS=12.395;HRun=0;HaplotypeScore=192.0720;InbreedingCoeff=0.1794;MQ=53.14;MQ0=5;MQRankSum=-2.668;QD=7.95;ReadPosRankSum=3.452;VQSLOD=3.6704;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:27:16.94:129,17,0	1/1:8,2:10:20.84:200,21,0	0/0:40,0:29:29.18:0,29,231	0/1:34,0:23:12.30:12,0,115	1/1:18,0:18:8.99:96,9,0	1/1:24,0:23:27.78:243,28,0	1/1:23,0:21:27.33:254,27,0	1/1:34,0:33:56.42:412,56,0	1/1:12,0:11:14.94:153,15,0	1/1:23,0:23:39.90:298,40,0	1/1:17,0:17:0.80:42,1,0	1/1:19,0:19:7.71:138,8,0	1/1:23,0:22:12.97:179,13,0	1/1:27,1:26:26.83:308,27,0	0/1:35,0:35:49.97:50,0,324	1/1:18,1:19:10.81:241,11,0	0/1:14,0:14:1.99:78,0,2	0/1:6,1:7:13.85:58,0,14	1/1:14,0:11:8.94:66,9,0	1/1:20,1:21:23.88:206,24,0	1/1:22,1:21:15.54:110,16,0	1/1:18,0:18:14.97:121,15,0	1/1:17,1:18:5.30:87,5,0	1/1:21,0:21:2.92:63,3,0	1/1:20,0:19:18.90:152,19,0	1/1:14,0:13:24.79:185,25,0	1/1:16,4:20:35.59:341,36,0	1/1:4,0:4:11.95:91,12,0
chr10	27052567	.	G	GTA	8175.90	PASS	AB=0.545;AC=45;AF=0.804;AN=56;BaseQRankSum=14.192;DP=364;FS=14.093;HRun=0;HaplotypeScore=129.0538;InbreedingCoeff=0.8620;MQ=48.64;MQ0=4;MQRankSum=-12.535;QD=32.44;ReadPosRankSum=6.028;VQSLOD=6.3337;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,7:7:15.05:186,15,0	1/1:0,12:12:30.10:378,30,0	0/0:17,0:12:36.12:0,36,565	0/0:10,0:7:14.78:0,15,245	1/1:1,18:19:42.12:492,42,0	1/1:0,8:8:24.08:300,24,0	1/1:1,9:10:30.08:354,30,0	0/0:42,0:42:99:0,126,2023	1/1:2,4:6:15.05:202,15,0	1/1:0,6:8:21.94:293,22,0	1/1:4,17:21:54.14:625,54,0	1/1:3,2:5:15.02:170,15,0	1/1:2,13:15:42.13:552,42,0	1/1:1,5:6:17.96:185,18,0	0/0:25,0:25:72.23:0,72,1130	1/1:0,9:9:27.09:336,27,0	0/0:18,0:18:47.97:0,48,783	0/1:1,5:6:0.22:189,0,0	1/1:1,7:7:21.07:303,21,0	1/1:2,21:23:60.19:732,60,0	1/1:0,1:1:3.01:42,3,0	1/1:0,11:12:35.47:420,35,0	1/1:4,10:14:35.88:396,36,0	1/1:2,4:6:9.03:102,9,0	1/1:5,26:31:80.81:962,81,0	1/1:0,13:13:36.12:526,36,0	1/1:0,8:8:24.08:312,24,0	1/1:0,4:4:9.03:121,9,0
chr10	27052569	.	ATTTC	A	7539.21	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=14.104;DP=353;FS=5.655;HRun=0;HaplotypeScore=138.2039;InbreedingCoeff=0.8937;MQ=46.57;MQ0=4;MQRankSum=-13.042;QD=31.15;ReadPosRankSum=6.714;VQSLOD=3.8435;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,7:8:15.05:183,15,0	1/1:0,12:12:30.09:372,30,0	0/0:17,0:12:33.11:0,33,897	0/0:9,0:6:15.52:0,16,394	1/1:0,19:19:42.12:474,42,0	1/1:0,8:8:24.07:295,24,0	1/1:0,9:9:27.08:323,27,0	0/0:42,0:42:99:0,126,3308	1/1:3,4:7:17.15:159,17,0	1/1:2,6:8:21.07:301,21,0	1/1:0,17:20:51.11:583,51,0	1/1:1,2:3:6.02:70,6,0	1/1:2,13:15:38.99:451,39,0	1/1:0,5:5:14.96:158,15,0	0/0:23,0:23:66.22:0,66,1791	1/1:0,9:9:27.08:330,27,0	0/0:20,0:20:56.74:0,57,1526	1/1:1,5:6:15.05:202,15,0	1/1:0,7:6:18.06:266,18,0	1/1:3,21:24:65.65:751,66,0	1/1:0,1:1:3.01:35,3,0	1/1:1,11:12:35.25:382,35,0	1/1:1,10:13:32.98:352,33,0	1/1:0,4:4:9.02:100,9,0	1/1:2,26:28:74.68:870,75,0	1/1:0,12:12:33.11:456,33,0	1/1:0,8:8:24.08:307,24,0	1/1:0,4:4:9.03:119,9,0
chr10	27052887	.	G	GA	15641.64	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=13.676;DP=499;FS=4.947;HRun=1;HaplotypeScore=151.6461;InbreedingCoeff=0.9778;MQ=63.89;MQ0=0;MQRankSum=-6.344;QD=40.84;ReadPosRankSum=6.493;VQSLOD=3.7752;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,7:7:18.06:270,18,0	1/1:0,7:7:21.07:314,21,0	0/0:12,0:8:21.06:0,21,280	0/0:16,0:14:35.95:0,36,418	1/1:0,28:28:69.19:1009,69,0	1/1:0,23:23:66.22:976,66,0	1/1:2,8:10:24.08:358,24,0	0/0:47,0:47:99:0,138,1871	1/1:0,16:16:48.16:709,48,0	1/1:1,20:21:60.19:883,60,0	1/1:1,22:23:60.12:843,60,0	1/1:0,15:15:42.14:628,42,0	1/1:0,21:21:63.21:940,63,0	1/1:0,16:16:48.16:715,48,0	0/0:24,0:24:72.24:0,72,1002	1/1:0,21:21:63.21:946,63,0	0/0:17,0:17:51.17:0,51,713	1/1:0,12:12:36.02:488,36,0	1/1:0,19:19:57.19:853,57,0	1/1:1,17:18:48.12:696,48,0	1/1:1,4:5:12.04:179,12,0	1/1:0,12:12:30.10:445,30,0	1/1:0,20:20:57.07:854,57,0	1/1:1,5:6:15.05:224,15,0	1/1:0,27:27:69.15:988,69,0	1/1:3,23:26:69.23:1029,69,0	1/1:0,26:26:75.25:1114,75,0	1/1:0,4:4:12.04:181,12,0
chr10	27054524	.	AGCTT	A	16253.58	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=6.659;DP=507;FS=73.766;HRun=0;HaplotypeScore=142.0728;InbreedingCoeff=0.9836;MQ=72.34;MQ0=0;MQRankSum=-11.335;QD=41.68;ReadPosRankSum=0.261;VQSLOD=2.3826;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,8:14:33.03:513,33,0	1/1:0,14:14:30.10:545,30,0	0/0:26,0:24:30.31:0,30,1085	0/0:20,0:17:39.13:0,39,984	1/1:5,19:24:60.18:963,60,0	1/1:3,20:23:54.18:973,54,0	1/1:1,17:18:45.15:820,45,0	0/0:26,0:26:66.20:0,66,1502	1/1:1,22:23:54.19:990,54,0	1/1:4,22:26:63.21:1109,63,0	1/1:5,14:19:48.16:793,48,0	1/1:3,14:17:45.15:801,45,0	1/1:2,18:20:42.11:719,42,0	1/1:1,21:22:54.18:958,54,0	0/0:27,0:27:75.22:0,75,1834	1/1:3,11:14:36.12:654,36,0	0/0:18,0:18:51.18:0,51,1345	1/1:0,6:6:18.06:331,18,0	1/1:8,7:15:30.10:519,30,0	1/1:3,20:23:63.21:1114,63,0	1/1:9,12:20:36:512,36,0	1/1:3,9:12:32.96:511,33,0	1/1:2,10:12:36.11:562,36,0	1/1:5,7:12:23.99:361,24,0	1/1:8,14:22:57.11:918,57,0	1/1:0,10:10:30.10:550,30,0	1/1:6,14:20:54.11:874,54,0	1/1:0,3:3:9.03:165,9,0
chr10	27054550	.	TGG	T	7037.67	PASS	AC=44;AF=0.815;AN=54;BaseQRankSum=10.269;DP=553;FS=47.791;HRun=4;HaplotypeScore=187.5796;InbreedingCoeff=0.9118;MQ=51.64;MQ0=11;MQRankSum=-5.232;QD=17.77;ReadPosRankSum=2.524;VQSLOD=-0.1978;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,8:13:11.84:155,12,0	1/1:6,4:10:14.93:166,15,0	0/0:34,0:19:44.52:0,45,417	0/0:43,0:17:38.45:0,38,381	1/1:10,18:29:27.08:372,27,0	1/1:17,8:25:35.97:428,36,0	1/1:11,4:15:20.79:194,21,0	0/0:30,0:29:74.42:0,74,692	1/1:12,6:18:9.01:295,9,0	1/1:12,8:20:54.67:561,55,0	1/1:8,15:22:1.54:279,2,0	1/1:11,6:17:31.19:337,31,0	1/1:8,6:14:26.99:338,27,0	1/1:12,10:22:27.04:358,27,0	0/0:25,0:25:49.70:0,50,847	1/1:9,12:21:21.85:431,22,0	0/0:21,0:21:44.88:0,45,686	1/1:5,1:6:11.93:106,12,0	1/1:4,7:11:29.90:280,30,0	1/1:10,19:29:38.04:466,38,0	1/1:10,12:21:18.06:247,18,0	1/1:6,11:17:21.05:278,21,0	1/1:3,12:15:24.08:343,24,0	1/1:3,13:16:15.05:213,15,0	1/1:11,11:22:27.03:343,27,0	1/1:8,7:15:35.84:383,36,0	1/1:5,10:15:36.02:464,36,0	./.
chr10	27054551	.	GGGGT	G	2093.92	PASS	AB=0.924;AC=37;AF=0.685;AN=54;BaseQRankSum=10.085;DP=552;FS=14.259;HRun=0;HaplotypeScore=216.3822;InbreedingCoeff=0.4425;MQ=50.35;MQ0=13;MQRankSum=-4.665;QD=5.33;ReadPosRankSum=2.177;VQSLOD=1.3706;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:14,0:13:1.19:1,0,4	1/1:10,0:10:10.51:48,11,0	0/0:34,0:18:44.64:0,45,418	0/0:47,0:17:44.53:0,45,427	0/1:26,3:29:15.29:81,0,15	1/1:23,2:25:9.69:128,10,0	1/1:13,0:13:12.77:77,13,0	0/0:29,0:28:80.45:0,80,813	0/1:15,3:18:28.97:137,0,29	1/1:19,2:20:47.25:335,47,0	0/1:23,0:22:25.75:35,0,26	0/1:15,1:17:0.40:124,0,0	1/1:13,1:14:11.35:96,11,0	1/1:21,1:22:10.33:54,10,0	0/0:26,0:26:74.82:0,75,1220	0/1:17,3:20:18.25:175,0,18	0/0:20,0:20:60.04:0,60,1088	1/1:6,0:6:10.95:68,11,0	1/1:11,0:11:26.58:177,27,0	1/1:27,2:29:29.57:207,30,0	1/1:22,0:21:4.79:21,5,0	1/1:16,1:17:10.58:88,11,0	1/1:15,0:15:11.97:41,12,0	1/1:16,0:16:8.30:26,8,0	1/1:19,2:21:15.16:115,15,0	0/1:14,0:15:1.59:150,0,2	1/1:15,0:15:20.49:88,20,0	./.
chr10	27054553	.	G	GGT	309.25	PASS	AB=0.862;AC=4;AF=0.074;AN=54;BaseQRankSum=-4.082;DP=540;FS=1.160;HRun=0;HaplotypeScore=205.5511;InbreedingCoeff=0.4278;MQ=47.47;MQ0=15;MQRankSum=1.124;QD=5.83;ReadPosRankSum=-0.033;VQSLOD=2.9555;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:17:12.17:0,12,73	0/0:9,0:9:8.62:0,9,46	./.	0/0:52,0:16:2.84:0,3,14	0/0:31,0:31:25.89:0,26,137	0/0:21,0:21:26.35:0,26,139	0/0:12,0:12:6.22:0,6,32	1/1:30,0:28:8.95:86,9,0	0/0:17,0:17:19.43:0,19,114	0/0:20,0:19:21.01:0,21,135	0/0:25,0:24:26.22:0,26,158	0/0:14,0:14:18.18:0,18,91	0/0:13,0:13:20.36:0,20,102	0/0:17,0:16:19.81:0,20,99	0/0:25,0:27:38.75:0,39,383	0/0:21,0:21:29.54:0,30,153	0/1:11,8:21:99:319,0,151	0/0:4,0:4:2.88:0,3,15	0/0:11,0:11:11.52:0,12,60	0/0:29,0:29:31.67:0,32,167	0/0:19,0:19:17.49:0,17,104	0/0:15,0:15:18.27:0,18,103	0/0:15,0:15:20.65:0,21,109	0/0:16,0:16:14.80:0,15,76	0/0:19,0:19:17.10:0,17,92	0/0:13,0:13:22.90:0,23,123	0/0:14,0:14:28.77:0,29,153	0/1:2,0:2:0:0,0,0
chr10	27054692	.	T	TAAAAGTGTAATCGAT	1682.64	PASS	AB=0.714;AC=23;AF=0.958;AN=24;BaseQRankSum=-1.300;DP=28;FS=0.000;HRun=0;HaplotypeScore=22.6454;InbreedingCoeff=-0.1731;MQ=157.54;MQ0=0;MQRankSum=-0.722;QD=67.31;ReadPosRankSum=-0.144;VQSLOD=2.8552;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	./.	1/1:3,1:6:14.97:436,15,0	0/1:3,0:5:4.55:418,0,5	./.	./.	./.	./.	./.	./.	1/1:1,0:1:3:26,3,0	./.	1/1:1,0:1:3:25,3,0	./.	./.	1/1:1,0:1:3:25,3,0	1/1:1,0:1:3.01:111,3,0	1/1:0,0:1:3.01:122,3,0	./.	1/1:1,0:1:3:25,3,0	./.	1/1:3,0:3:9.02:214,9,0	./.	./.	1/1:0,0:1:3.01:132,3,0	1/1:2,0:2:6.01:99,6,0	1/1:2,0:2:6.02:125,6,0	./.
chr10	27055438	.	C	CTT	4124.01	PASS	AB=0.973;AC=40;AF=0.714;AN=56;BaseQRankSum=10.308;DP=555;FS=9.335;HRun=3;HaplotypeScore=116.7935;InbreedingCoeff=0.4231;MQ=51.03;MQ0=10;MQRankSum=-6.833;QD=10.21;ReadPosRankSum=1.215;VQSLOD=-0.1821;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:24,1:22:12.88:256,13,0	0/1:12,0:11:6.56:99,0,7	0/0:20,0:15:17.26:0,17,447	0/0:25,0:17:45.12:0,45,579	0/1:20,1:19:11.61:81,0,12	1/1:23,0:21:3.91:176,4,0	1/1:11,0:10:11.44:136,11,0	0/0:37,0:37:98.84:0,99,1126	1/1:13,0:11:0.31:36,0,0	1/1:24,0:22:29.88:286,30,0	1/1:13,0:12:17.98:194,18,0	0/1:14,1:13:4.40:144,0,4	1/1:19,0:19:14.57:188,15,0	1/1:26,0:23:28.67:325,29,0	0/0:32,0:32:96.30:0,96,1322	1/1:19,1:18:26.97:284,27,0	0/0:34,0:34:84.04:0,84,969	0/1:17,0:15:3.25:141,0,3	1/1:16,0:13:21.48:231,21,0	1/1:17,0:16:21.04:211,21,0	1/1:15,0:12:9.09:89,9,0	0/1:16,0:13:8.76:96,0,9	1/1:16,0:13:16.03:209,16,0	1/1:18,0:17:24.07:289,24,0	1/1:21,1:20:31.84:369,32,0	0/1:19,0:17:24.97:118,0,25	1/1:15,0:13:1.03:97,1,0	1/1:9,0:7:6.95:68,7,0
chr10	27055441	.	TC	T	3541.67	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=10.959;DP=567;FS=7.658;HRun=1;HaplotypeScore=109.0002;InbreedingCoeff=0.9610;MQ=50.70;MQ0=11;MQRankSum=-6.022;QD=8.41;ReadPosRankSum=-2.005;VQSLOD=0.0283;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:26:49.64:258,50,0	1/1:13,0:12:14.32:123,14,0	0/0:17,0:15:13.71:0,14,426	0/0:24,0:17:45.03:0,45,572	1/1:23,0:21:14.42:100,14,0	1/1:22,0:20:27.97:147,28,0	1/1:11,1:11:16.24:82,16,0	0/0:38,0:36:97.32:0,97,643	1/1:11,1:10:13.51:113,14,0	1/1:24,0:22:46.32:301,46,0	1/1:12,0:11:19.64:115,20,0	1/1:16,0:14:22.51:146,23,0	1/1:20,0:20:24.60:143,25,0	1/1:27,0:24:31.79:162,32,0	0/0:33,0:33:96.28:0,96,1274	1/1:20,0:17:31.80:207,32,0	0/0:33,1:34:56.08:0,56,513	1/1:19,0:16:23.46:157,23,0	1/1:17,0:14:30.93:170,31,0	1/1:16,1:16:29.22:178,29,0	1/1:14,0:11:23.54:132,24,0	1/1:15,0:12:17.31:112,17,0	1/1:20,0:17:14.25:112,14,0	1/1:18,0:16:21.85:104,22,0	1/1:24,0:22:38.09:198,38,0	1/1:20,2:20:42.08:286,42,0	1/1:16,0:14:13.99:61,14,0	1/1:9,0:7:17.77:135,18,0
chr10	27055442	.	C	CT	4049.90	PASS	AB=1.000;AC=45;AF=0.804;AN=56;BaseQRankSum=4.812;DP=562;FS=0.540;HRun=8;HaplotypeScore=108.2460;InbreedingCoeff=0.4720;MQ=50.76;MQ0=9;MQRankSum=-4.331;QD=8.30;ReadPosRankSum=-0.155;VQSLOD=1.6089;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:26:28.70:206,29,0	0/1:13,0:12:6.44:26,0,6	0/0:17,0:15:31.36:0,31,276	0/0:23,0:16:36.02:0,36,329	0/1:23,0:21:6.45:36,0,6	1/1:22,0:20:8.77:108,9,0	1/1:12,0:11:11.28:59,11,0	1/1:12,26:36:75.22:866,75,0	1/1:12,0:10:4.96:31,5,0	1/1:24,0:22:20.58:131,21,0	1/1:11,0:10:14.55:84,15,0	1/1:16,0:14:14.28:80,14,0	1/1:20,0:20:14.70:92,15,0	1/1:27,0:24:32.06:195,32,0	0/0:34,0:34:87.03:0,87,796	1/1:19,0:16:23.32:137,23,0	1/1:8,26:34:78.05:865,78,0	0/1:16,0:15:1.50:85,0,1	1/1:17,0:14:20.44:126,20,0	1/1:17,0:16:20.56:139,21,0	1/1:14,0:11:18.17:105,18,0	0/1:15,0:12:0.33:45,0,0	1/1:19,0:16:13.82:74,14,0	1/1:18,0:16:23.36:149,23,0	1/1:25,0:23:34.79:210,35,0	0/1:22,0:20:10.03:86,0,10	1/1:16,0:14:14.25:79,14,0	1/1:9,0:7:5.87:35,6,0
chr10	27055450	.	T	TTC	6461.76	PASS	AB=0.664;AC=45;AF=0.804;AN=56;BaseQRankSum=12.047;DP=498;FS=2.719;HRun=0;HaplotypeScore=95.6013;InbreedingCoeff=0.6451;MQ=54.00;MQ0=7;MQRankSum=-6.624;QD=16.57;ReadPosRankSum=-1.634;VQSLOD=4.0257;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,8:26:44.32:487,44,0	0/1:1,6:8:6.25:76,0,6	0/0:20,0:14:10.63:0,11,418	0/0:24,0:16:36.11:0,36,497	1/1:2,15:18:9.49:102,9,0	1/1:1,15:19:23.43:332,23,0	1/1:1,5:10:12.01:171,12,0	0/0:31,0:29:37.76:0,38,138	0/1:1,6:9:2.86:64,0,3	1/1:0,13:17:29.88:378,30,0	1/1:1,8:8:17.99:279,18,0	1/1:1,10:12:14.80:202,15,0	1/1:0,16:17:15.05:281,15,0	1/1:0,22:24:32.97:522,33,0	0/0:33,0:33:92.66:0,93,1304	1/1:1,15:15:24.03:387,24,0	0/1:27,0:29:13.98:14,0,69	1/1:3,8:13:9.88:258,10,0	1/1:1,7:8:24.02:350,24,0	1/1:1,11:17:26.86:323,27,0	1/1:1,7:13:18.88:223,19,0	1/1:6,5:11:19.61:232,20,0	1/1:1,15:16:19.18:246,19,0	1/1:1,18:17:24.08:446,24,0	1/1:2,19:22:16.20:520,16,0	1/1:4,10:15:33.30:252,33,0	1/1:1,9:14:14.79:204,15,0	1/1:0,5:3:6.02:113,6,0
chr10	27055951	.	G	GA	20157.35	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=12.457;DP=641;FS=3.743;HRun=1;HaplotypeScore=122.3417;InbreedingCoeff=0.9416;MQ=91.24;MQ0=0;MQRankSum=-7.986;QD=39.92;ReadPosRankSum=3.884;VQSLOD=4.4895;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,29:30:75.25:1124,75,0	1/1:0,14:14:36.12:540,36,0	0/0:28,0:28:72.23:0,72,919	0/0:27,0:27:53.81:0,54,755	1/1:1,25:26:75.21:1099,75,0	1/1:1,23:25:72.20:1045,72,0	1/1:0,17:17:48.16:719,48,0	0/0:42,0:42:99:0,123,1572	1/1:1,22:23:57.19:854,57,0	1/1:2,26:28:78.24:1141,78,0	1/1:1,34:35:99:1484,99,0	1/1:0,21:21:63.21:944,63,0	1/1:0,18:18:54.15:785,54,0	1/1:1,27:28:75.25:1124,75,0	0/0:24,0:24:69.22:0,69,896	1/1:2,22:24:60.20:899,60,0	0/0:15,0:15:45.15:0,45,584	1/1:2,11:13:0.17:494,0,0	1/1:1,16:17:51.16:744,51,0	1/1:1,28:29:75.17:1074,75,0	1/1:0,18:18:51.13:739,51,0	1/1:2,26:28:72.24:1079,72,0	1/1:2,12:14:36.12:539,36,0	1/1:0,21:21:51.13:739,51,0	1/1:1,16:17:42.14:630,42,0	1/1:0,20:20:57.16:807,57,0	1/1:2,30:32:84.27:1240,84,0	1/1:0,7:7:21.07:315,21,0
chr10	27058339	.	AC	A	18916.51	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-7.111;DP=603;FS=4.131;HRun=1;HaplotypeScore=72.5297;InbreedingCoeff=0.9977;MQ=79.54;MQ0=0;MQRankSum=-3.384;QD=38.61;ReadPosRankSum=6.291;VQSLOD=5.0877;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,26:26:72.24:1007,72,0	1/1:0,12:12:27.09:378,27,0	0/0:19,0:19:45.61:0,46,678	0/0:9,0:9:18.53:0,19,321	1/1:0,33:33:87.29:1216,87,0	1/1:0,29:29:84.28:1174,84,0	1/1:0,22:22:57.19:797,57,0	0/0:31,0:31:90.28:0,90,1375	1/1:0,19:19:45.15:629,45,0	1/1:0,20:20:60.20:839,60,0	1/1:0,13:13:36.03:478,36,0	1/1:0,17:17:45.15:629,45,0	1/1:0,39:39:99:1552,111,0	1/1:0,19:19:57.19:797,57,0	0/0:25,0:25:75.24:0,75,1172	1/1:0,22:22:63.21:881,63,0	0/0:29,0:29:84.29:0,84,1336	1/1:0,9:9:27.09:376,27,0	1/1:0,13:13:39.12:528,39,0	1/1:0,33:33:99:1360,99,0	1/1:0,19:19:54.18:754,54,0	1/1:0,19:19:48.16:671,48,0	1/1:0,25:25:69.23:965,69,0	1/1:0,13:13:36.12:503,36,0	1/1:0,19:19:45.15:629,45,0	1/1:0,20:20:60.19:823,60,0	1/1:0,37:37:99:1426,102,0	1/1:0,12:12:36.12:503,36,0
chr10	27058409	.	G	GT	1824.59	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-4.657;DP=548;FS=0.000;HRun=5;HaplotypeScore=73.8151;InbreedingCoeff=0.9945;MQ=80.45;MQ0=0;MQRankSum=-0.178;QD=30.41;ReadPosRankSum=-2.605;VQSLOD=3.0800;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:75.16:0,75,795	0/0:11,0:11:27.05:0,27,282	0/0:12,0:12:22.72:0,23,326	0/0:18,0:17:44.82:0,45,455	0/0:21,0:21:54.13:0,54,580	0/0:24,0:24:63.11:0,63,659	0/0:19,0:19:45.11:0,45,483	1/1:6,27:33:81.24:1038,81,0	0/0:16,0:16:39.10:0,39,419	0/0:22,0:22:63.15:0,63,672	0/0:25,0:25:72.15:0,72,759	0/0:10,0:10:21.05:0,21,226	0/0:26,0:26:66.12:0,66,691	0/0:18,0:18:51.13:0,51,548	0/0:31,0:31:90.21:0,90,959	0/0:18,0:18:51.10:0,51,538	1/1:2,25:27:69.22:908,69,0	0/0:10,0:10:30.04:0,30,310	0/0:20,0:20:51.12:0,51,548	0/0:22,0:22:63.14:0,63,669	0/0:12,0:12:27.07:0,27,290	0/0:12,0:12:27.07:0,27,290	0/0:24,0:24:63.14:0,63,668	0/0:13,0:13:36.09:0,36,385	0/0:19,0:19:54.13:0,54,573	0/0:20,0:20:51.13:0,51,548	0/0:25,0:25:69.17:0,69,742	0/0:13,0:13:39.10:0,39,419
chr10	27058977	.	A	AT	963.59	PASS	AB=0.857;AC=5;AF=0.089;AN=56;BaseQRankSum=-7.349;DP=474;FS=20.649;HRun=9;HaplotypeScore=46.6056;InbreedingCoeff=0.6796;MQ=72.99;MQ0=0;MQRankSum=-2.272;QD=14.82;ReadPosRankSum=-3.894;VQSLOD=1.1332;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:29.98:0,30,260	0/1:5,1:6:18.18:18,0,89	0/0:13,0:13:29.79:0,30,238	0/0:10,0:10:1.52:0,2,88	0/0:25,0:25:62.97:0,63,547	0/0:19,0:19:47.99:0,48,417	0/0:6,0:7:20.03:0,20,162	1/1:14,25:39:26.01:698,26,0	0/0:10,0:10:29.99:0,30,260	0/0:23,0:23:56.97:0,57,495	0/0:27,0:27:74.98:0,75,651	0/0:14,0:14:32.12:0,32,285	0/0:27,0:27:65.97:0,66,569	0/0:18,0:18:41.98:0,42,365	0/0:21,0:21:59.99:0,60,521	0/0:15,0:15:41.99:0,42,365	1/1:4,16:19:13.10:372,13,0	0/0:18,0:18:47.96:0,48,411	0/0:15,0:15:26.97:0,27,234	0/0:20,0:20:53.99:0,54,469	0/0:3,0:3:9:0,9,78	0/0:15,0:15:35.97:0,36,313	0/0:18,0:18:38.98:0,39,339	0/0:8,0:8:20.99:0,21,182	0/0:17,0:17:38.98:0,39,339	0/0:16,0:16:41.98:0,42,365	0/0:24,0:23:68.98:0,69,599	0/0:12,0:12:26.98:0,27,234
chr10	27061338	.	CGT	C	1527.94	PASS	AB=0.875;AC=6;AF=0.107;AN=56;BaseQRankSum=7.290;DP=834;FS=2.624;HRun=0;HaplotypeScore=113.5600;InbreedingCoeff=0.6573;MQ=59.68;MQ0=13;MQRankSum=0.765;QD=19.59;ReadPosRankSum=-0.442;VQSLOD=3.4944;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,103,1663	0/0:8,0:8:18.05:0,18,275	0/0:48,1:18:45.14:0,45,702	0/0:53,0:23:50.85:0,51,689	0/0:17,0:17:38.12:0,38,624	0/0:28,1:29:40.15:0,40,1210	0/0:19,0:19:48.16:0,48,789	1/1:8,20:28:53.80:641,54,0	0/0:31,0:31:87.26:0,87,1395	0/0:36,0:36:84.29:0,84,1401	0/0:23,0:23:66.21:0,66,1071	0/0:27,0:27:63.20:0,63,997	0/0:42,0:42:99:0,102,1660	0/0:27,0:27:63.20:0,63,1022	0/0:37,0:37:96.33:0,96,1603	0/0:22,0:22:48.62:0,49,770	1/1:5,29:34:78.25:991,78,0	0/0:36,0:36:90.05:0,90,1442	0/0:24,0:24:27.33:0,27,744	0/0:29,1:30:28.10:0,28,1012	0/0:84,1:85:99:0,178,3349	0/1:10,1:11:5.01:5,0,469	0/0:14,0:14:36.12:0,36,595	0/0:35,0:35:74.93:0,75,1221	0/0:20,0:20:48.12:0,48,758	0/0:29,0:29:81.27:0,81,1319	0/0:19,0:19:48.15:0,48,776	0/1:4,1:5:23.07:23,0,186
chr10	27061483	.	T	TA	2069.23	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-11.665;DP=475;FS=9.370;HRun=5;HaplotypeScore=60.3352;InbreedingCoeff=0.9891;MQ=76.68;MQ0=0;MQRankSum=-1.061;QD=35.68;ReadPosRankSum=-0.448;VQSLOD=3.1937;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:51.12:0,51,546	0/0:6,0:6:18.05:0,18,193	0/0:21,0:21:41.51:0,42,439	0/0:7,0:7:21.05:0,21,218	0/0:24,0:24:66.15:0,66,700	0/0:24,0:24:69.16:0,69,732	0/0:12,0:12:36.09:0,36,387	1/1:1,31:32:93.29:1204,93,0	0/0:14,0:14:33.07:0,33,346	0/0:17,0:17:45.09:0,45,470	0/0:17,0:17:51.10:0,51,532	0/0:19,0:19:48.11:0,48,509	0/0:23,0:23:60.15:0,60,644	0/0:19,0:19:48.10:0,48,508	0/0:14,0:14:36.07:0,36,379	0/0:9,0:9:27.04:0,27,280	1/1:1,25:26:75.24:987,75,0	0/0:21,0:21:57.14:0,57,611	0/0:21,0:21:54.12:0,54,573	0/0:18,0:18:54.14:0,54,580	0/0:8,0:8:24.05:0,24,250	0/0:9,0:9:24.06:0,24,258	0/0:10,0:10:30.08:0,30,322	0/0:8,0:8:24.06:0,24,258	0/0:21,0:21:63.16:0,63,677	0/0:24,0:24:60.14:0,60,639	0/0:23,0:23:66.12:0,66,686	0/0:9,0:9:27.07:0,27,290
chr10	27064910	.	T	TTGAGACA	58869.30	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-0.579;DP=730;FS=4.182;HRun=0;HaplotypeScore=168.0148;InbreedingCoeff=0.9322;MQ=71.97;MQ0=0;MQRankSum=-13.496;QD=90.71;ReadPosRankSum=2.481;VQSLOD=5.6715;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,22:36:75.26:2941,75,0	1/1:2,12:15:42.14:1606,42,0	0/0:22,0:22:54.18:0,54,1383	0/0:20,0:20:51.17:0,51,1160	1/1:4,36:46:99:3867,99,0	1/1:6,20:28:69.24:2671,69,0	1/1:3,9:12:33.11:1298,33,0	1/1:11,19:32:93.30:3438,93,0	1/1:3,18:21:57.20:2227,57,0	1/1:10,21:34:93.28:3322,93,0	1/1:5,18:27:54.05:2026,54,0	1/1:8,24:39:81.28:3124,81,0	1/1:6,22:30:75.16:2794,75,0	1/1:6,22:32:87.30:3333,87,0	0/0:39,0:39:99:0,117,3017	1/1:3,28:33:81.28:3214,81,0	1/1:3,14:19:45.15:1733,45,0	1/1:3,0:3:3.01:56,3,0	1/1:11,11:23:63.22:2075,63,0	1/1:9,33:44:99:3949,102,0	1/1:6,4:11:18.06:651,18,0	1/1:6,12:19:45.15:1774,45,0	1/1:6,13:22:45.15:1734,45,0	1/1:10,4:15:24.08:920,24,0	1/1:9,20:30:75.26:2893,75,0	1/1:8,25:34:96.33:3614,96,0	1/1:7,25:38:78.27:3010,78,0	1/1:0,6:6:15.05:598,15,0
chr10	27065662	.	CACAGACAT	C	3181.21	PASS	AB=0.965;AC=49;AF=0.875;AN=56;BaseQRankSum=7.819;DP=500;FS=28.465;HRun=0;HaplotypeScore=122.2122;InbreedingCoeff=0.3599;MQ=54.31;MQ0=24;MQRankSum=-0.568;QD=6.99;ReadPosRankSum=0.375;VQSLOD=0.8304;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:31,1:31:16.64:124,17,0	1/1:5,0:5:6:53,6,0	0/1:15,0:5:10.99:11,0,96	0/1:15,0:8:2.31:2,0,86	1/1:11,0:10:5.99:95,6,0	1/1:21,1:22:11.87:83,12,0	1/1:13,0:13:8.99:118,9,0	0/0:28,0:27:65.32:0,65,1103	1/1:15,0:15:9.02:166,9,0	1/1:11,0:11:19.81:158,20,0	1/1:20,0:18:10.01:112,10,0	1/1:15,0:14:12.04:236,12,0	1/1:18,0:18:38.79:460,39,0	1/1:12,0:11:5.89:112,6,0	0/0:17,0:17:19.09:0,19,948	1/1:22,0:21:10.86:191,11,0	0/1:29,0:28:12.92:13,0,1543	1/1:17,0:14:11.93:93,12,0	1/1:10,0:9:23.89:196,24,0	1/1:21,0:21:8.93:63,9,0	1/1:31,0:29:9.03:123,9,0	1/1:14,0:14:2.49:14,2,0	1/1:21,0:20:2.44:21,2,0	1/1:22,0:20:2.56:21,3,0	1/1:17,0:17:5.85:36,6,0	1/1:22,1:22:59.68:561,60,0	1/1:3,15:18:8.80:139,9,0	1/1:4,0:3:8.98:127,9,0
chr10	27065664	.	CAG	C	3579.09	PASS	AB=0.556;AC=43;AF=0.768;AN=56;BaseQRankSum=4.971;DP=493;FS=18.252;HRun=0;HaplotypeScore=95.7503;InbreedingCoeff=0.6045;MQ=53.04;MQ0=27;MQRankSum=0.881;QD=9.37;ReadPosRankSum=1.104;VQSLOD=1.9741;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,28:31:11.91:180,12,0	1/1:0,5:5:6.02:90,6,0	0/0:13,0:4:11.97:0,12,157	0/0:15,0:6:10.81:0,11,123	1/1:2,9:10:5.91:62,6,0	1/1:3,21:24:1.17:104,1,0	1/1:2,12:13:9.01:107,9,0	0/0:27,0:26:54.63:0,55,1236	1/1:3,12:15:6.91:87,7,0	1/1:0,11:11:20.76:308,21,0	1/1:5,14:17:4.59:49,5,0	0/1:3,12:14:0.89:72,0,1	1/1:10,6:17:33.31:400,33,0	1/1:2,10:11:5.89:85,6,0	0/0:15,0:15:18.15:0,18,613	1/1:3,19:21:11.22:177,11,0	0/0:28,0:27:13.42:0,13,964	1/1:4,13:14:12.04:173,12,0	1/1:1,9:9:24.07:348,24,0	1/1:0,20:20:8.92:137,9,0	1/1:8,25:30:5.83:60,6,0	0/0:1,11:13:2.68:0,3,11	1/1:1,20:20:3.01:46,3,0	1/1:4,18:20:2.82:46,3,0	1/1:1,16:17:5.38:53,5,0	1/1:3,19:21:41.69:803,42,0	1/1:16,1:18:6.30:63,6,0	1/1:3,1:3:9.03:130,9,0
chr10	27065670	.	TACACAC	T	740.05	PASS	AB=0.947;AC=23;AF=0.479;AN=48;BaseQRankSum=5.184;DP=519;FS=4.383;HRun=0;HaplotypeScore=123.6361;InbreedingCoeff=-0.0363;MQ=51.92;MQ0=29;MQRankSum=-1.612;QD=2.27;ReadPosRankSum=1.183;VQSLOD=1.8408;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:34,0:33:1.06:1,0,5	./.	./.	./.	1/1:11,0:10:3.01:40,3,0	0/1:24,1:25:39:39,0,48	1/1:17,0:17:2.62:57,3,0	0/0:32,0:31:20.86:0,21,154	0/1:17,1:18:14.01:77,0,14	0/0:11,0:11:3.95:0,4,30	0/1:20,2:20:16.18:16,0,61	0/1:13,2:14:11.89:110,0,12	0/1:14,1:17:2.75:129,0,3	1/1:12,1:12:4.78:61,5,0	0/0:19,0:19:27.98:0,28,563	1/1:21,2:22:5.10:98,5,0	0/0:29,0:30:50.75:0,51,1052	./.	0/0:11,0:10:1.25:0,1,3	0/0:19,1:21:2.04:0,2,8	0/1:31,0:28:21.12:38,0,21	0/1:15,0:15:18.43:18,0,30	0/1:19,1:19:0:1,0,0	0/0:19,4:21:0:0,0,0	1/1:16,1:17:2.86:25,3,0	0/1:23,1:22:55.38:89,0,55	0/1:17,0:17:12.02:21,0,12	1/1:3,1:3:3.01:53,3,0
chr10	27066068	.	CTCTATATCT	C	2334.19	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.561;DP=519;FS=3.471;HRun=0;HaplotypeScore=145.1122;InbreedingCoeff=0.9900;MQ=87.20;MQ0=0;MQRankSum=-7.022;QD=72.94;ReadPosRankSum=-1.338;VQSLOD=3.0332;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:35:99:0,99,4801	0/0:13,0:13:39.13:0,39,1921	0/0:20,0:20:60.19:0,60,2364	0/0:21,0:21:57.20:0,57,2425	0/0:22,0:22:63.22:0,63,3139	0/0:25,0:25:72.25:0,72,3533	0/0:17,0:17:51.16:0,51,2258	1/1:0,20:20:60.04:1480,60,0	0/0:16,0:16:48.16:0,48,2343	0/0:22,0:22:66.23:0,66,3260	0/0:16,0:16:39.13:0,39,1935	0/0:18,0:18:51.18:0,51,2478	0/0:14,0:14:42.14:0,42,1917	0/0:16,0:16:45.15:0,45,2173	0/0:18,0:18:51.16:0,51,2454	0/0:16,0:16:48.16:0,48,2370	1/1:0,12:12:30.10:976,30,0	0/0:5,0:5:15.05:0,15,759	0/0:17,0:17:51.18:0,51,2518	0/0:27,0:27:81.28:0,81,3972	0/0:25,0:25:72.25:0,72,3617	0/0:15,0:15:42.14:0,42,2040	0/0:11,0:11:27.09:0,27,1366	0/0:21,0:20:60.21:0,60,2951	0/0:24,0:23:69.24:0,69,3384	0/0:28,0:28:84.29:0,84,4229	0/0:16,0:16:48.16:0,48,2364	0/0:8,0:8:24.08:0,24,1134
chr10	27067598	.	AT	A	3446.16	PASS	AB=0.750;AC=22;AF=0.393;AN=56;BaseQRankSum=-0.716;DP=658;FS=7.623;HRun=2;HaplotypeScore=191.1797;InbreedingCoeff=-0.6785;MQ=44.60;MQ0=11;MQRankSum=0.440;QD=6.43;ReadPosRankSum=-1.000;VQSLOD=-0.0666;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:13,6:17:20.96:21,0,169	0/1:7,5:12:20.95:21,0,199	0/0:20,0:9:27.08:0,27,341	0/0:15,0:5:8.35:0,8,132	0/1:13,12:22:99:115,0,239	0/1:16,18:33:99:460,0,328	0/1:17,5:21:93.78:94,0,200	0/0:27,0:26:63.09:0,63,825	0/1:19,4:21:37.36:37,0,394	0/1:17,6:18:99:115,0,496	0/1:24,7:25:58.78:59,0,421	0/1:17,8:23:99:210,0,349	0/1:16,20:30:99:173,0,313	0/1:14,13:20:26.73:292,0,27	0/0:26,0:26:78.25:0,78,1151	0/1:14,13:25:99:250,0,128	0/0:23,1:24:0.52:0,1,423	0/1:11,4:14:52.28:52,0,241	0/1:6,2:7:57.14:57,0,170	0/1:19,12:29:99:260,0,328	0/0:7,3:9:12.18:0,12,147	0/1:20,4:22:63.94:64,0,349	0/1:19,6:21:99:110,0,395	0/1:15,4:18:50.31:50,0,226	0/1:15,10:19:99:157,0,108	0/1:24,16:33:99:460,0,611	0/1:23,16:30:99:326,0,368	0/1:4,2:5:62.86:63,0,102
chr10	27067630	.	C	CGATA	2207.65	PASS	AB=0.992;AC=34;AF=0.654;AN=52;BaseQRankSum=-3.221;DP=637;FS=6.948;HRun=0;HaplotypeScore=219.8804;InbreedingCoeff=0.0062;MQ=45.27;MQ0=11;MQRankSum=3.890;QD=3.97;ReadPosRankSum=-0.384;VQSLOD=1.6344;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:21,0:20:14.62:15,0,17	0/1:12,0:12:6:6,0,11	./.	./.	1/1:25,0:23:7.89:114,8,0	1/1:28,0:27:17.77:97,18,0	0/0:10,0:10:2.87:0,3,23	1/1:38,0:36:9.46:139,9,0	0/1:24,0:22:12.39:12,0,28	0/1:28,0:23:5.96:159,0,6	0/1:25,0:21:0.24:16,0,0	1/1:20,0:19:14.43:65,14,0	0/1:38,0:33:20.72:232,0,21	0/1:24,0:17:4.32:121,0,4	0/0:27,0:27:45.14:0,45,674	1/1:22,0:20:17.49:112,17,0	1/1:22,5:27:27.09:593,27,0	0/0:11,0:11:8.48:0,8,38	1/1:6,0:6:3.01:46,3,0	1/1:28,0:26:3.85:27,4,0	1/1:14,0:14:6.89:99,7,0	0/1:26,0:26:1.66:22,0,2	0/1:28,0:24:0.92:38,0,1	1/1:17,0:17:0.50:2,1,0	0/1:23,0:18:5.89:65,0,6	0/1:32,0:27:11.63:117,0,12	0/1:41,0:34:13.43:184,0,13	1/1:5,0:3:6.47:72,6,0
chr10	27067666	.	AGAT	A	1105.74	PASS	AB=0.988;AC=19;AF=0.339;AN=56;BaseQRankSum=1.346;DP=634;FS=15.102;HRun=0;HaplotypeScore=187.1850;InbreedingCoeff=-0.3424;MQ=51.38;MQ0=10;MQRankSum=-1.710;QD=2.61;ReadPosRankSum=-4.019;VQSLOD=0.7285;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:23:21.83:22,0,297	0/1:13,0:13:61.80:62,0,361	0/0:17,0:10:30.07:0,30,363	0/0:14,0:8:13.11:0,13,162	0/1:28,0:28:21.70:22,0,571	0/0:23,0:23:39.08:0,39,706	0/0:9,0:9:14.89:0,15,210	0/1:33,5:36:56.04:56,0,1235	0/1:22,0:21:75.06:75,0,450	0/1:23,0:20:34.96:35,0,614	0/1:22,0:21:6.75:7,0,463	0/1:22,0:21:99:126,0,341	0/1:35,0:32:99:136,0,721	0/0:25,0:22:33.11:0,33,537	0/0:24,0:24:69.22:0,69,1259	0/0:30,0:30:34.10:0,34,756	0/0:29,0:29:56.97:0,57,873	0/1:8,0:8:16.62:17,0,98	0/1:8,0:8:25.33:25,0,199	0/1:30,0:30:48.42:48,0,561	0/1:19,0:17:6.94:7,0,203	0/1:28,0:27:65.54:66,0,270	0/1:25,1:25:0.70:1,0,645	0/0:17,0:17:17.95:0,18,265	0/0:23,0:21:6.43:0,6,605	0/1:33,1:32:99:222,0,784	0/1:36,1:33:99:204,0,842	1/1:6,0:3:9.03:136,9,0
chr10	27067681	.	GGACT	G	205.99	PASS	AB=0.885;AC=8;AF=0.143;AN=56;BaseQRankSum=5.570;DP=620;FS=4.526;HRun=0;HaplotypeScore=188.0458;InbreedingCoeff=-0.1689;MQ=55.38;MQ0=6;MQRankSum=-5.228;QD=1.29;ReadPosRankSum=-3.807;VQSLOD=1.7514;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:19:35.70:0,36,684	0/1:11,1:12:22.98:23,0,713	0/0:19,0:14:39.06:0,39,1026	0/0:15,0:11:17.22:0,17,428	0/0:25,1:26:51.18:0,51,1477	0/0:29,0:29:60.08:0,60,1578	0/0:10,0:10:23.91:0,24,655	0/0:35,0:34:99:0,102,2866	0/1:20,1:20:40.96:41,0,918	0/1:19,3:19:14.75:15,0,1322	0/0:18,4:21:45.13:0,45,1279	0/0:19,1:19:37.62:0,38,1066	0/1:34,2:33:47.87:48,0,1380	0/0:30,0:27:48.09:0,48,1225	0/0:25,0:25:75.23:0,75,2001	0/0:28,0:28:56.76:0,57,1522	0/0:25,0:25:66.22:0,66,1745	0/1:7,1:8:2.72:3,0,392	0/0:2,0:2:6.02:0,6,174	0/0:28,0:28:48.10:0,48,1207	0/0:18,0:16:24.08:0,24,630	0/1:16,4:19:28.42:28,0,482	0/0:27,2:29:60.20:0,60,1644	0/0:13,1:14:18.06:0,18,522	0/0:27,1:28:21.63:0,22,1605	0/1:34,4:35:99:129,0,1980	0/0:34,3:34:5.26:0,5,1645	0/1:2,1:2:49.87:50,0,81
chr10	27067740	.	C	CGATA	2112.18	PASS	AB=1.000;AC=39;AF=0.750;AN=52;BaseQRankSum=-0.657;DP=665;FS=5.128;HRun=0;HaplotypeScore=152.7999;InbreedingCoeff=0.3678;MQ=51.83;MQ0=10;MQRankSum=-2.750;QD=4.19;ReadPosRankSum=-3.176;VQSLOD=1.4748;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:26:3.01:49,3,0	1/1:9,0:9:5.98:48,6,0	./.	./.	1/1:33,0:33:2.73:26,3,0	1/1:25,0:24:5.20:118,5,0	1/1:17,0:16:2.74:12,3,0	1/1:47,0:46:21.27:112,21,0	1/1:24,0:24:3.01:49,3,0	1/1:29,0:29:12.88:143,13,0	1/1:25,0:25:10.07:77,10,0	1/1:23,0:22:5.51:62,6,0	1/1:31,0:30:8.61:108,9,0	0/0:23,0:21:2.37:0,2,8	0/0:27,0:27:33.04:0,33,456	1/1:29,0:28:12.04:194,12,0	1/1:24,4:27:36.07:635,36,0	1/1:13,0:12:3.14:63,3,0	1/1:12,0:10:4.56:45,5,0	0/1:26,0:25:1.88:42,0,2	1/1:19,0:17:3.35:33,3,0	0/0:19,0:19:0:0,0,1	0/0:30,0:30:0:0,0,0	0/0:20,0:20:0:0,0,0	1/1:32,0:32:5.97:46,6,0	1/1:27,0:26:17.19:259,17,0	1/1:28,0:27:7.79:103,8,0	0/0:5,0:5:1.76:0,2,4
chr10	27067767	.	TA	T	1701.18	PASS	AB=0.863;AC=19;AF=0.365;AN=52;BaseQRankSum=0.759;DP=635;FS=10.166;HRun=1;HaplotypeScore=136.1194;InbreedingCoeff=-0.4497;MQ=52.30;MQ0=14;MQRankSum=-1.019;QD=4.25;ReadPosRankSum=-0.562;VQSLOD=-0.6447;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:32:12.34:12,0,40	0/1:3,2:5:34.58:72,0,35	./.	./.	0/0:28,0:28:15.43:0,15,89	0/1:21,2:22:23.28:23,0,486	0/1:12,4:15:56.82:57,0,270	0/0:37,0:32:90.31:0,90,1387	0/1:18,0:18:3.09:3,0,15	0/1:28,0:27:99:242,0,572	0/1:16,6:21:92.88:93,0,318	0/1:15,9:23:99:205,0,366	0/1:32,0:32:25.01:25,0,78	0/0:25,0:24:11.99:0,12,164	0/0:30,0:30:88.84:0,89,1337	1/1:22,0:21:3.62:48,4,0	0/0:25,0:24:60.16:0,60,758	0/1:18,1:18:15.51:16,0,423	0/1:5,6:9:99:217,0,113	0/1:27,0:25:53.79:54,0,184	0/1:11,6:17:95:95,0,288	0/0:22,0:22:12.70:0,13,75	0/0:27,0:27:10.72:0,11,141	0/0:25,1:26:2.78:0,3,44	0/1:15,17:32:99:290,0,252	0/1:29,0:28:99:213,0,497	0/1:31,0:31:42.07:46,0,42	0/1:7,4:10:99:141,0,209
chr10	27067775	.	TA	T	1813.16	PASS	AB=0.851;AC=15;AF=0.268;AN=56;BaseQRankSum=-0.336;DP=640;FS=3.360;HRun=1;HaplotypeScore=134.3693;InbreedingCoeff=-0.2645;MQ=51.62;MQ0=10;MQRankSum=0.292;QD=6.57;ReadPosRankSum=0.835;VQSLOD=0.8167;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:35:11.53:0,12,141	0/1:6,0:6:28.15:28,0,127	0/0:6,0:3:9.02:0,9,115	0/0:9,0:3:9.03:0,9,126	0/0:28,0:28:20.75:0,21,170	0/1:10,11:20:99:213,0,164	0/1:7,6:12:45.85:46,0,162	0/0:49,0:44:99:0,129,1890	0/0:23,0:23:8.60:0,9,78	0/1:28,1:28:99:447,0,618	0/1:19,2:20:11.89:12,0,265	0/1:14,8:21:99:207,0,284	0/1:34,0:33:24.77:25,0,111	1/1:19,1:19:3.01:42,3,0	0/0:27,0:27:79.79:0,80,1193	0/0:24,0:23:10.21:0,10,41	0/0:26,0:25:63.17:0,63,796	0/1:15,5:19:99:171,0,254	0/1:10,2:11:92.68:93,0,204	0/1:22,0:21:14.02:14,0,178	0/1:12,8:20:99:278,0,165	0/0:22,0:22:12.70:0,13,73	0/0:28,0:28:13.71:0,14,179	0/0:27,0:27:5.79:0,6,83	0/0:31,0:31:37.10:0,37,515	0/1:25,0:25:99:254,0,489	0/0:28,0:27:7.50:0,8,64	0/1:7,4:10:99:141,0,196
chr10	27067776	.	A	AGAT	325.37	PASS	AB=0.957;AC=9;AF=0.161;AN=56;BaseQRankSum=6.252;DP=635;FS=15.523;HRun=0;HaplotypeScore=150.8518;InbreedingCoeff=-0.0963;MQ=51.59;MQ0=10;MQRankSum=3.593;QD=1.69;ReadPosRankSum=-2.816;VQSLOD=0.8292;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:36:8.54:0,9,111	0/0:6,0:6:8.68:0,9,93	0/0:6,0:3:9.02:0,9,119	0/0:11,0:5:9.03:0,9,130	0/1:28,0:28:10.71:11,0,95	0/0:21,0:20:18.45:0,18,209	0/0:12,0:11:13.86:0,14,189	0/0:46,0:41:99:0,117,1744	0/0:23,0:23:5.60:0,6,69	0/0:29,0:28:20.31:0,20,692	0/1:17,4:20:99:237,0,178	0/0:22,0:21:32.22:0,32,356	0/0:34,0:33:11.22:0,11,126	0/0:19,0:18:2.68:0,3,12	0/0:26,0:26:75.24:0,75,1149	1/1:24,0:23:1.88:3,2,0	0/1:26,0:25:67.82:68,0,421	0/1:20,0:19:1.39:1,0,238	0/0:12,0:11:26.28:0,26,253	0/0:21,0:20:0.56:0,1,158	0/1:20,0:20:23.38:23,0,210	0/1:22,0:22:16.69:17,0,33	0/0:27,0:27:7.97:0,8,174	0/0:27,0:27:6.73:0,7,88	0/1:26,5:31:85.79:86,0,420	0/0:26,0:26:54.41:0,54,598	0/0:27,0:26:2.35:0,2,34	0/0:11,0:10:19.79:0,20,244
chr10	27069379	.	TA	T	14511.73	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=8.751;DP=489;FS=22.302;HRun=1;HaplotypeScore=49.9433;InbreedingCoeff=0.9682;MQ=86.93;MQ0=0;MQRankSum=-5.636;QD=39.22;ReadPosRankSum=6.151;VQSLOD=2.7004;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,23:23:63.16:857,63,0	1/1:0,12:12:30.10:419,30,0	0/0:21,0:21:62.88:0,63,935	0/0:20,0:19:53.36:0,53,769	1/1:0,24:24:69.18:942,69,0	1/1:0,22:22:63.21:881,63,0	1/1:0,13:13:36.12:503,36,0	0/0:36,0:36:99:0,108,1641	1/1:0,4:4:12.04:168,12,0	1/1:0,14:14:42.14:588,42,0	1/1:0,20:20:60.20:838,60,0	1/1:0,10:10:30.10:420,30,0	1/1:0,24:24:63.21:881,63,0	1/1:0,11:11:24.08:336,24,0	0/0:18,0:18:54.18:0,54,863	1/1:0,25:25:66.22:923,66,0	0/0:24,0:24:72.22:0,72,1126	1/1:0,12:12:36.12:503,36,0	1/1:0,20:20:60.20:838,60,0	1/1:0,10:10:30.05:396,30,0	1/1:0,13:13:39.13:545,39,0	1/1:0,16:16:45.15:629,45,0	1/1:0,15:15:42.14:587,42,0	1/1:0,15:15:42.14:587,42,0	1/1:0,16:16:45.15:629,45,0	1/1:0,23:23:66.02:868,66,0	1/1:0,26:26:78.26:1090,78,0	1/1:0,2:2:6.02:84,6,0
chr10	27070603	.	GT	G	839.04	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-7.425;DP=607;FS=2.086;HRun=9;HaplotypeScore=142.9023;InbreedingCoeff=0.9740;MQ=77.62;MQ0=1;MQRankSum=-2.831;QD=19.07;ReadPosRankSum=-0.911;VQSLOD=2.0333;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:36.11:0,36,416	0/0:10,0:10:27.08:0,27,311	0/0:18,1:19:10.15:0,10,310	0/0:15,0:15:29.82:0,30,318	0/0:32,0:32:81.19:0,81,895	0/0:29,0:29:66.20:0,66,760	0/0:13,0:13:36.11:0,36,416	1/1:6,19:23:57.02:522,57,0	0/0:21,0:22:47.19:0,47,570	0/0:21,1:23:26.52:0,27,531	0/0:19,0:19:51.13:0,51,571	0/0:23,0:23:60.14:0,60,675	0/0:33,0:33:87.25:0,87,993	0/0:25,0:25:66.19:0,66,758	0/0:20,0:20:48.14:0,48,554	0/0:21,0:21:57.16:0,57,650	1/1:2,17:19:48.02:439,48,0	0/0:12,0:12:33.07:0,33,367	0/0:25,0:25:60.18:0,60,689	0/0:30,0:30:78.23:0,78,900	0/0:8,0:8:24.07:0,24,277	0/0:26,0:26:69.20:0,69,796	0/0:33,0:33:84.25:0,84,969	0/0:14,0:14:42.12:0,42,483	0/0:22,0:22:54.15:0,54,615	0/0:25,0:25:72.21:0,72,821	0/0:37,1:37:83.86:0,84,1216	0/0:13,0:13:36.09:0,36,404
chr10	27071885	.	AG	A	12060.81	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=6.781;DP=550;FS=4.384;HRun=7;HaplotypeScore=55.7350;InbreedingCoeff=0.9916;MQ=71.56;MQ0=2;MQRankSum=-3.317;QD=26.68;ReadPosRankSum=4.017;VQSLOD=5.5670;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,24:28:55.82:660,56,0	1/1:1,5:6:15.03:153,15,0	0/0:21,0:16:25.98:0,26,524	0/0:24,0:17:17.74:0,18,354	1/1:1,29:30:84.19:857,84,0	1/1:2,23:25:63.14:643,63,0	1/1:4,17:21:48.10:489,48,0	0/0:18,0:18:36.07:0,36,409	1/1:0,21:21:60.14:612,60,0	1/1:5,28:32:76.03:784,76,0	1/1:1,22:23:60.13:612,60,0	1/1:0,10:10:27.06:275,27,0	1/1:1,19:20:45.10:459,45,0	1/1:1,23:24:60.13:611,60,0	0/0:18,0:18:51.16:0,51,640	1/1:0,18:18:54.12:551,54,0	0/0:17,0:17:39.12:0,39,489	1/1:1,7:8:18.04:184,18,0	1/1:2,17:19:51.11:520,51,0	1/1:1,17:19:53.15:526,53,0	1/1:0,14:14:36.08:367,36,0	1/1:3,15:18:42.09:428,42,0	1/1:0,26:26:78.18:795,78,0	1/1:1,10:11:30.07:306,30,0	1/1:0,25:25:63.14:643,63,0	1/1:0,28:28:84.18:850,84,0	1/1:0,14:14:39.09:398,39,0	1/1:0,11:11:33.08:337,33,0
chr10	27072696	.	T	TAC	19032.24	PASS	AB=0.667;AC=45;AF=0.804;AN=56;BaseQRankSum=5.468;DP=769;FS=1.388;HRun=0;HaplotypeScore=193.2148;InbreedingCoeff=0.8706;MQ=69.68;MQ0=5;MQRankSum=-4.549;QD=31.35;ReadPosRankSum=4.993;VQSLOD=6.1317;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:12,21:33:60.19:933,60,0	0/1:5,5:10:21.87:180,0,22	0/0:45,1:40:63.03:0,63,894	0/0:38,0:33:22.75:0,23,549	1/1:14,14:28:39.13:623,39,0	1/1:9,24:33:66.22:1060,66,0	1/1:8,11:19:42.09:598,42,0	0/0:36,0:36:66.19:0,66,788	1/1:2,23:25:60.20:954,60,0	1/1:13,29:42:99:1707,108,0	1/1:10,14:24:26.42:713,26,0	1/1:13,15:28:66.07:931,66,0	1/1:12,22:34:66.20:1017,66,0	1/1:8,18:26:26.28:895,26,0	0/0:24,0:23:57.18:0,57,701	1/1:7,15:21:54.02:768,54,0	0/0:12,0:11:18.06:0,18,221	1/1:11,9:20:9.78:559,10,0	1/1:8,10:18:47.42:623,47,0	1/1:12,21:33:57.13:820,57,0	1/1:10,25:35:81.24:1257,81,0	1/1:8,14:22:14.26:705,14,0	1/1:16,21:37:66.20:1044,66,0	1/1:11,20:31:54.10:867,54,0	1/1:11,15:26:42.13:646,42,0	1/1:9,16:24:60.16:899,60,0	1/1:5,18:23:60.18:905,60,0	1/1:8,5:13:26.96:327,27,0
chr10	27072710	.	CAGAG	C	9438.95	PASS	AB=0.977;AC=34;AF=0.607;AN=56;BaseQRankSum=11.447;DP=807;FS=18.562;HRun=0;HaplotypeScore=269.6106;InbreedingCoeff=0.0761;MQ=68.73;MQ0=6;MQRankSum=-1.163;QD=15.10;ReadPosRankSum=11.609;VQSLOD=2.5035;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:33,0:33:15.19:449,15,0	0/1:9,0:9:57.87:58,0,89	0/0:55,0:45:99:0,122,2524	0/0:55,0:43:53.74:0,54,1673	1/1:25,2:27:15.14:412,15,0	1/1:28,0:28:65.89:579,66,0	0/1:19,0:19:24.23:288,0,24	0/0:36,0:36:99:0,99,1495	1/1:27,0:27:38.83:473,39,0	0/1:45,1:46:99:787,0,120	1/1:26,0:26:5.19:426,5,0	0/1:29,1:30:10.22:464,0,10	0/1:34,0:35:27.44:416,0,27	0/1:27,1:28:81.24:425,0,81	0/0:20,0:20:60.21:0,60,1641	1/1:24,0:23:3.80:427,4,0	0/0:14,0:13:21.05:0,21,384	0/1:20,1:21:55.48:250,0,55	0/1:24,1:25:71.29:260,0,71	1/1:36,0:36:14.96:463,15,0	1/1:35,0:35:58.77:685,59,0	0/1:22,1:23:82.60:326,0,83	1/1:31,1:32:15.28:488,15,0	1/1:31,2:33:53.90:459,54,0	0/1:26,0:26:45.60:276,0,46	0/1:25,1:25:51.44:439,0,51	0/1:26,0:26:7.68:382,0,8	1/1:10,0:10:26.88:207,27,0
chr10	27072719	.	AGAC	A	21802.55	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=7.714;DP=803;FS=5.223;HRun=0;HaplotypeScore=214.6636;InbreedingCoeff=0.9878;MQ=72.02;MQ0=11;MQRankSum=-6.335;QD=33.13;ReadPosRankSum=7.959;VQSLOD=4.5717;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:1,31:32:64.10:1024,64,0	1/1:0,9:9:18.06:299,18,0	0/0:52,0:43:95.13:0,95,1871	0/0:68,0:50:80.62:0,81,1712	1/1:3,26:29:24.08:398,24,0	1/1:1,28:28:66.22:1084,66,0	1/1:2,15:16:36.12:591,36,0	1/1:6,32:38:87.77:1435,88,0	1/1:2,25:26:63.20:1000,63,0	1/1:4,41:45:99:2041,129,0	1/1:2,22:24:36.12:588,36,0	1/1:2,26:28:60.20:964,60,0	1/1:3,33:35:63.14:1023,63,0	1/1:0,28:28:72.25:1181,72,0	0/0:25,0:25:72.23:0,72,1475	1/1:2,18:19:51.17:841,51,0	1/1:1,12:12:18.06:300,18,0	1/1:5,14:19:36.12:564,36,0	1/1:4,20:24:60.20:952,60,0	1/1:1,31:32:48.16:788,48,0	1/1:4,29:33:69.24:1143,69,0	1/1:4,20:23:45.15:739,45,0	1/1:3,28:31:57.13:919,57,0	1/1:3,33:36:54.18:887,54,0	1/1:2,23:25:48.16:779,48,0	1/1:3,22:24:66.21:1042,66,0	1/1:4,25:28:63.20:976,63,0	1/1:0,5:5:15.05:246,15,0
chr10	27072722	.	CG	C	4566.27	PASS	AB=1.000;AC=49;AF=0.875;AN=56;BaseQRankSum=10.896;DP=782;FS=0.839;HRun=1;HaplotypeScore=248.1583;InbreedingCoeff=0.8138;MQ=72.61;MQ0=10;MQRankSum=-6.956;QD=7.18;ReadPosRankSum=8.776;VQSLOD=1.3868;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:32,0:32:56.91:277,57,0	1/1:9,0:9:13.47:44,13,0	0/0:51,0:42:99:0,109,1595	0/0:70,1:53:74.04:0,74,1488	0/1:29,0:30:22.40:46,0,22	1/1:28,0:28:53.73:231,54,0	1/1:15,0:15:28.42:116,28,0	1/1:33,0:33:72.10:284,72,0	1/1:27,0:26:52.43:246,52,0	1/1:43,0:43:99:442,101,0	1/1:22,0:22:28.45:107,28,0	1/1:27,1:28:25.95:176,26,0	1/1:34,0:33:51.37:230,51,0	1/1:28,0:28:58.58:257,59,0	0/0:24,0:24:72.23:0,72,1127	1/1:19,0:19:38.78:139,39,0	1/1:12,0:11:13.32:42,13,0	1/1:16,1:19:33.01:159,33,0	1/1:24,1:25:58.49:268,58,0	1/1:32,0:32:17.35:121,17,0	1/1:30,0:32:54.03:201,54,0	1/1:21,0:21:36.05:143,36,0	1/1:30,0:30:45.50:167,46,0	1/1:34,0:34:42.80:156,43,0	1/1:23,0:23:37.80:160,38,0	1/1:23,0:22:53.40:238,53,0	1/1:28,0:28:34.50:266,35,0	1/1:5,0:5:12.25:50,12,0
chr10	27073619	.	GGA	G	2149.82	PASS	AB=1.000;AC=52;AF=0.929;AN=56;BaseQRankSum=-1.538;DP=247;FS=5.459;HRun=0;HaplotypeScore=53.3081;InbreedingCoeff=0.1441;MQ=61.37;MQ0=13;MQRankSum=-1.423;QD=9.15;ReadPosRankSum=-0.446;VQSLOD=2.4805;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,4:17:27.80:278,28,0	1/1:2,0:2:3.01:38,3,0	0/1:32,0:7:5.65:6,0,74	0/1:38,0:11:32.46:32,0,33	1/1:7,2:9:3:38,3,0	1/1:4,6:7:6.42:55,6,0	1/1:0,7:7:5.94:41,6,0	1/1:7,1:8:18.06:219,18,0	1/1:1,3:4:8.94:75,9,0	1/1:1,0:1:3.01:36,3,0	1/1:3,4:7:8.75:78,9,0	1/1:0,5:5:14.91:130,15,0	1/1:4,2:6:5.81:49,6,0	1/1:4,5:8:20.76:156,21,0	0/0:12,0:11:17.51:0,18,212	1/1:3,7:10:11.97:113,12,0	1/1:11,1:11:15.05:181,15,0	1/1:7,0:6:7.28:107,7,0	1/1:0,2:2:3.01:38,3,0	1/1:3,0:3:3.01:38,3,0	1/1:5,0:5:3.01:38,3,0	1/1:3,4:6:8.82:60,9,0	1/1:1,2:3:8.94:78,9,0	1/1:8,1:6:3.35:39,3,0	1/1:1,6:7:2.97:20,3,0	1/1:0,4:4:9.02:100,9,0	1/1:1,4:5:3.01:37,3,0	1/1:5,0:5:15.05:190,15,0
chr10	27073624	.	GAGAGAGAA	G	610.72	PASS	AB=1.000;AC=33;AF=0.589;AN=56;BaseQRankSum=2.247;DP=283;FS=0.000;HRun=0;HaplotypeScore=80.8967;InbreedingCoeff=-0.0777;MQ=56.04;MQ0=16;MQRankSum=0.825;QD=2.83;ReadPosRankSum=4.064;VQSLOD=0.9670;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:23:11.04:98,11,0	0/1:2,0:2:7.38:7,0,11	0/0:29,0:7:5.80:0,6,82	0/1:33,0:10:14.53:37,0,15	1/1:10,0:10:2.60:12,3,0	1/1:10,0:7:3.76:18,4,0	0/0:8,0:8:3.01:0,3,63	0/1:13,0:13:36.90:60,0,37	0/1:6,0:6:11.77:12,0,14	0/1:3,0:3:6.25:33,0,6	0/1:8,0:8:4.76:5,0,5	0/1:7,0:7:7.90:21,0,8	1/1:4,4:8:0.69:87,1,0	0/1:12,0:11:3:60,0,3	0/0:12,0:11:16.97:0,17,237	0/1:14,0:13:15.51:19,0,16	1/1:12,0:11:12.70:76,13,0	1/1:7,0:6:13.91:72,14,0	0/1:3,0:3:6.96:7,0,37	1/1:2,0:2:2.68:11,3,0	1/1:7,0:7:2.44:14,2,0	0/0:6,0:5:2.04:0,2,7	0/1:5,0:5:3.55:5,0,4	1/1:10,0:6:3.47:39,3,0	0/0:10,0:10:3.26:0,3,10	0/1:7,0:7:18.34:18,0,67	1/1:4,0:4:2.96:20,3,0	0/1:5,0:5:28.38:28,0,46
chr10	27074766	.	C	CAG	20889.49	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-11.420;DP=511;FS=4.454;HRun=0;HaplotypeScore=63.3472;InbreedingCoeff=0.9951;MQ=86.53;MQ0=1;MQRankSum=-4.990;QD=49.04;ReadPosRankSum=5.424;VQSLOD=5.8117;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,11:12:30.10:561,30,0	1/1:0,11:11:27.09:504,27,0	0/0:16,0:16:45.15:0,45,637	0/0:17,0:18:38.86:0,39,449	1/1:2,26:28:63.21:1180,63,0	1/1:1,17:18:51.17:955,51,0	1/1:0,19:19:57.20:1068,57,0	0/0:19,0:19:51.13:0,51,710	1/1:2,15:17:36.12:674,36,0	1/1:2,9:10:27.07:445,27,0	1/1:1,15:16:45.15:843,45,0	1/1:2,22:24:63.22:1180,63,0	1/1:2,18:20:57.19:1045,57,0	1/1:2,17:19:48.16:899,48,0	0/0:22,0:22:63.21:0,63,928	1/1:0,21:21:63.22:1180,63,0	0/0:10,0:10:18.06:0,18,265	1/1:1,10:11:30.09:532,30,0	1/1:2,17:19:51.15:922,51,0	1/1:0,36:36:99:2023,108,0	1/1:1,17:18:42.14:786,42,0	1/1:1,12:13:27.09:506,27,0	1/1:0,23:23:66.23:1236,66,0	1/1:0,11:11:30.10:561,30,0	1/1:3,19:23:51.17:955,51,0	1/1:1,22:23:66.22:1207,66,0	1/1:3,23:26:69.24:1292,69,0	1/1:1,6:7:18.06:337,18,0
chr10	27074816	.	AAGAGAG	A	3401.53	PASS	AB=0.907;AC=44;AF=0.815;AN=54;BaseQRankSum=-0.441;DP=487;FS=3.299;HRun=0;HaplotypeScore=129.7199;InbreedingCoeff=0.1694;MQ=61.23;MQ0=7;MQRankSum=-0.886;QD=8.95;ReadPosRankSum=-0.363;VQSLOD=2.4489;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:17,1:18:14.97:159,15,0	0/1:6,1:7:13.69:31,0,14	./.	0/0:37,0:14:0:0,0,0	1/1:15,3:18:11.84:87,12,0	1/1:15,3:18:23.39:277,23,0	1/1:17,4:19:26.68:369,27,0	0/0:23,0:23:1.77:0,2,6	1/1:10,1:11:9.03:144,9,0	1/1:13,0:13:6.67:143,7,0	1/1:14,2:16:10.89:60,11,0	1/1:15,2:16:6.02:117,6,0	1/1:16,2:18:0.07:205,0,0	1/1:20,1:21:18.02:255,18,0	0/0:16,0:19:11.19:0,11,294	0/1:11,2:13:13.13:58,0,13	1/1:5,0:15:2.92:17,3,0	1/1:8,0:8:2.45:21,2,0	1/1:15,0:13:5.02:56,5,0	1/1:19,5:24:21.46:328,21,0	1/1:19,0:19:3.83:63,4,0	1/1:10,3:14:18.71:175,19,0	1/1:15,1:16:14.03:160,14,0	0/1:13,1:14:4.92:81,0,5	1/1:20,2:22:20.44:279,20,0	1/1:15,3:18:14.77:178,15,0	0/1:19,1:20:10.47:118,0,10	1/1:4,0:4:2.84:20,3,0
chr10	27078553	.	G	GAAA	23909.86	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-5.785;DP=593;FS=2.322;HRun=7;HaplotypeScore=80.4312;InbreedingCoeff=0.9750;MQ=58.41;MQ0=0;MQRankSum=0.115;QD=44.03;ReadPosRankSum=2.358;VQSLOD=4.8991;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,33:35:87.30:1782,87,0	1/1:3,12:15:36.12:702,36,0	0/0:16,0:14:27.06:0,27,368	0/0:13,0:12:20.59:0,21,234	1/1:5,21:27:66.22:1277,66,0	1/1:3,24:27:63.22:1284,63,0	1/1:3,19:22:54.18:1097,54,0	1/1:5,0:33:38.38:120,38,0	1/1:2,15:18:48.16:992,48,0	1/1:5,17:23:54.17:1066,54,0	1/1:1,13:15:42.10:805,42,0	1/1:5,19:24:54.19:1099,54,0	1/1:3,13:16:45.15:889,45,0	1/1:2,23:26:63.19:1268,63,0	0/0:21,0:21:48.13:0,48,655	1/1:1,20:21:54.19:1120,54,0	1/1:4,0:28:27.41:61,27,0	1/1:4,22:27:51.20:1330,51,0	1/1:1,7:7:21.07:395,21,0	1/1:5,19:25:63.17:1243,63,0	1/1:0,11:11:33.11:662,33,0	1/1:4,14:19:39.13:806,39,0	1/1:2,16:19:45.12:887,45,0	1/1:4,9:13:24.08:476,24,0	1/1:4,30:35:81.26:1641,81,0	1/1:2,23:26:72.23:1437,72,0	1/1:4,21:26:63.22:1285,63,0	1/1:0,3:3:9.03:187,9,0
chr10	27080366	.	AAT	A	3198.97	PASS	AC=44;AF=0.815;AN=54;BaseQRankSum=6.374;DP=212;FS=2.457;HRun=0;HaplotypeScore=27.6617;InbreedingCoeff=0.6200;MQ=75.53;MQ0=4;MQRankSum=-2.682;QD=26.66;ReadPosRankSum=3.039;VQSLOD=4.1237;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,3:4:9.03:118,9,0	1/1:1,4:4:6.02:79,6,0	0/0:6,0:2:1.82:0,2,5	0/0:38,0:13:5.94:0,6,139	1/1:0,6:6:15.05:184,15,0	1/1:0,10:10:30.10:394,30,0	1/1:0,4:4:3.01:39,3,0	0/0:35,0:35:78.27:0,78,1315	1/1:0,5:5:15.05:197,15,0	1/1:5,2:7:15.01:174,15,0	1/1:0,3:2:3.01:39,3,0	1/1:0,7:7:15.05:197,15,0	1/1:1,5:6:9.03:118,9,0	1/1:0,2:2:6.02:79,6,0	0/0:4,0:4:12.04:0,12,200	1/1:1,4:5:6.02:79,6,0	0/0:9,0:9:21.07:0,21,348	1/1:0,12:12:30.10:394,30,0	1/1:1,6:7:18.06:235,18,0	1/1:0,3:3:3.01:39,3,0	1/1:0,1:1:3.01:39,3,0	./.	1/1:1,0:1:3.01:39,3,0	1/1:0,3:3:6.02:79,6,0	1/1:1,7:8:18.06:236,18,0	1/1:0,6:6:12.04:157,12,0	1/1:0,8:8:18.06:237,18,0	1/1:2,5:7:15.05:197,15,0
chr10	27080534	.	CA	C	10464.37	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-0.892;DP=412;FS=7.019;HRun=6;HaplotypeScore=42.3213;InbreedingCoeff=0.9726;MQ=82.43;MQ0=0;MQRankSum=-5.612;QD=28.36;ReadPosRankSum=2.955;VQSLOD=5.1282;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,18:20:48.12:516,48,0	1/1:0,4:4:12.03:129,12,0	0/0:12,0:12:30.05:0,30,357	0/0:15,0:15:13.04:0,13,369	1/1:0,15:15:39.10:419,39,0	1/1:1,17:18:48.12:516,48,0	1/1:0,18:18:51.13:547,51,0	1/1:2,34:36:99:1086,102,0	1/1:1,13:14:30.08:322,30,0	1/1:1,12:13:33.08:355,33,0	1/1:0,8:8:24.06:258,24,0	1/1:0,13:13:36.09:387,36,0	1/1:0,13:13:36.09:387,36,0	1/1:1,9:9:21.05:226,21,0	0/0:16,0:16:42.14:0,42,551	1/1:0,9:9:24.06:258,24,0	1/1:1,12:13:30.07:322,30,0	1/1:0,10:10:30.08:322,30,0	1/1:0,23:23:69.17:741,69,0	1/1:1,12:13:36.09:387,36,0	1/1:3,17:20:42.10:451,42,0	1/1:1,14:15:36.09:387,36,0	1/1:0,23:23:69.17:741,69,0	1/1:1,11:12:33.08:355,33,0	1/1:1,12:13:33.08:355,33,0	1/1:1,19:20:51.13:548,51,0	1/1:0,9:9:24.06:258,24,0	1/1:0,7:7:18.05:193,18,0
chr10	27080706	.	CTT	C	1729.34	PASS	AB=0.965;AC=39;AF=0.813;AN=48;BaseQRankSum=-0.260;DP=270;FS=9.433;HRun=3;HaplotypeScore=61.0343;InbreedingCoeff=0.2389;MQ=34.27;MQ0=36;MQRankSum=-1.328;QD=7.69;ReadPosRankSum=1.313;VQSLOD=-0.3499;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:7:2.74:0,3,12	1/1:6,0:5:8.77:52,9,0	0/1:3,0:2:18.95:19,0,24	./.	./.	1/1:18,0:16:7.91:71,8,0	1/1:9,1:6:5.58:41,6,0	1/1:20,0:19:47.43:319,47,0	1/1:8,0:8:14.77:116,15,0	1/1:2,7:7:14.80:100,15,0	1/1:6,0:4:3.85:24,4,0	1/1:13,0:10:2.83:18,3,0	1/1:13,0:13:17.09:118,17,0	1/1:9,0:5:5.91:38,6,0	0/1:15,2:17:16.70:17,0,155	1/1:13,0:11:17.77:145,18,0	0/1:9,0:5:6:24,0,6	./.	1/1:7,0:6:16.14:110,16,0	1/1:9,0:8:10.54:88,11,0	1/1:7,0:5:8.97:75,9,0	1/1:7,0:7:5.96:43,6,0	./.	0/0:6,0:3:2.74:0,3,12	1/1:12,0:11:2.06:24,2,0	1/1:16,0:15:41.53:285,42,0	1/1:13,0:11:17.83:129,18,0	0/0:8,0:3:2.94:0,3,18
chr10	27080709	.	T	TCACACACACACA	5031.52	PASS	AB=1.000;AC=43;AF=0.860;AN=50;BaseQRankSum=0.898;DP=323;FS=1.215;HRun=0;HaplotypeScore=114.6542;InbreedingCoeff=0.0610;MQ=34.76;MQ0=35;MQRankSum=-2.644;QD=17.41;ReadPosRankSum=-1.855;VQSLOD=3.2593;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:12:2.37:8,2,0	1/1:7,0:6:9.03:230,9,0	0/0:3,0:2:6.02:0,6,159	./.	./.	1/1:18,0:16:9.03:212,9,0	1/1:10,0:7:5.75:104,6,0	1/1:27,0:25:19.58:421,20,0	0/1:10,0:10:23.70:61,0,24	1/1:12,0:10:21.07:590,21,0	1/1:8,0:6:5.71:114,6,0	1/1:15,0:12:3.08:71,3,0	1/1:15,0:15:28.32:577,28,0	1/1:10,0:6:9.03:232,9,0	0/1:18,0:18:57.93:58,0,840	1/1:14,0:12:12.51:277,13,0	1/1:15,0:11:18.06:440,18,0	1/1:4,0:1:3.01:47,3,0	1/1:9,0:8:6.02:107,6,0	1/1:7,0:7:11.69:184,12,0	1/1:9,0:7:3.48:55,3,0	1/1:8,0:8:6.02:187,6,0	0/1:3,0:3:0:0,0,0	./.	1/1:13,0:12:3.01:64,3,0	1/1:17,0:16:25.07:602,25,0	0/1:14,0:12:18.52:313,0,19	0/1:10,0:5:78.87:79,0,85
chr10	27081384	.	CAT	C	18570.80	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=9.779;DP=607;FS=3.552;HRun=0;HaplotypeScore=77.5897;InbreedingCoeff=0.9857;MQ=76.83;MQ0=0;MQRankSum=-3.144;QD=37.29;ReadPosRankSum=4.820;VQSLOD=6.9118;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,17:17:42.14:602,42,0	1/1:1,9:10:24.08:344,24,0	0/0:10,0:10:30.10:0,30,523	0/0:16,0:16:36.17:0,36,793	1/1:1,17:18:51.17:730,51,0	1/1:1,26:27:66.22:946,66,0	1/1:1,15:16:42.14:602,42,0	0/0:30,0:30:84.28:0,84,1492	1/1:0,22:22:57.19:812,57,0	1/1:0,25:25:75.22:1038,75,0	1/1:1,14:15:39.13:559,39,0	1/1:0,29:29:72.24:1031,72,0	1/1:0,32:32:90.29:1289,90,0	1/1:1,24:25:57.19:817,57,0	0/0:29,0:29:81.28:0,81,1484	1/1:1,23:24:66.22:946,66,0	0/0:24,0:24:66.23:0,66,1209	1/1:1,9:10:27.09:387,27,0	1/1:2,24:26:72.22:1010,72,0	1/1:2,21:23:57.19:807,57,0	1/1:1,33:34:87.29:1247,87,0	1/1:1,24:25:66.22:946,66,0	1/1:1,19:20:51.17:731,51,0	1/1:3,16:19:48.16:688,48,0	1/1:1,22:23:54.18:774,54,0	1/1:1,25:26:75.21:1020,75,0	1/1:1,27:28:78.26:1117,78,0	1/1:0,4:4:9.03:129,9,0
chr10	27081569	.	GCACACACACACACACACACACACACACA	G	907.37	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=0.520;DP=469;FS=12.725;HRun=0;HaplotypeScore=309.1828;InbreedingCoeff=0.8728;MQ=62.37;MQ0=13;MQRankSum=1.481;QD=27.50;ReadPosRankSum=-1.377;VQSLOD=0.8595;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:42.14:0,42,2944	0/0:8,0:8:24.08:0,24,1910	0/0:32,0:13:12.04:0,12,794	0/0:43,0:17:24.04:0,24,1077	0/0:13,0:13:21.03:0,21,1538	0/0:17,0:17:33.11:0,33,2212	0/0:17,0:17:28.65:0,29,2023	1/1:13,4:16:21.06:369,21,0	0/0:14,0:14:26.98:0,27,1686	0/0:17,0:17:39.13:0,39,2867	0/0:11,0:11:27.09:0,27,2259	0/0:16,0:16:39.13:0,39,2972	0/0:15,0:15:27.09:0,27,2107	0/0:10,0:10:15.05:0,15,1062	0/0:14,0:15:33.11:0,33,2753	0/0:16,0:16:41.68:0,42,3115	1/1:13,3:15:8.82:651,9,0	0/0:8,0:8:18.06:0,18,1499	0/0:11,0:11:24.08:0,24,1158	0/0:23,0:23:33.11:0,33,2558	0/0:21,0:20:34.04:0,34,2136	0/0:11,0:10:18.06:0,18,1510	0/0:17,0:17:30.47:0,30,1963	0/0:24,0:24:18.53:0,19,1204	0/0:15,0:15:21.07:0,21,1619	0/0:13,0:13:23.56:0,24,1400	0/0:20,0:20:45.15:0,45,3007	0/0:2,0:2:6.02:0,6,513
chr10	27081613	.	ACACAC	A	1537.10	PASS	AB=0.879;AC=21;AF=0.375;AN=56;BaseQRankSum=10.663;DP=482;FS=27.135;HRun=0;HaplotypeScore=154.6962;InbreedingCoeff=-0.5912;MQ=58.14;MQ0=13;MQRankSum=-9.103;QD=4.31;ReadPosRankSum=3.800;VQSLOD=1.1944;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:35,1:36:53.94:54,0,292	0/1:4,0:7:23.07:79,0,23	0/0:23,0:18:51.17:0,51,687	0/0:18,0:10:30.08:0,30,389	0/1:13,3:16:33.97:34,0,126	0/1:14,1:15:39.91:40,0,104	0/1:14,3:17:99:101,0,108	0/0:17,0:14:42.14:0,42,569	0/1:14,1:15:38.03:38,0,98	0/1:16,2:18:88.40:88,0,139	0/1:10,3:13:59.49:59,0,73	0/1:18,4:20:99:243,0,121	0/1:17,4:21:99:120,0,149	0/1:11,2:13:64.67:65,0,92	0/0:18,0:18:52.06:0,52,932	0/1:13,2:16:99:118,0,136	0/1:16,0:14:76.01:76,0,251	0/1:12,4:16:99:130,0,105	0/1:12,1:11:16.03:16,0,74	0/1:16,3:19:87.75:88,0,98	0/0:17,0:16:27:0,27,169	0/0:17,1:18:2.48:0,2,169	0/0:14,0:14:31.98:0,32,162	0/1:20,1:21:8.25:8,0,85	0/1:15,2:17:46.62:47,0,145	0/1:16,0:16:66.17:66,0,139	0/1:12,6:18:99:222,0,107	0/1:11,1:12:1.90:2,0,131
chr10	27081615	.	ACAC	A	656.83	PASS	AB=0.981;AC=18;AF=0.321;AN=56;BaseQRankSum=11.248;DP=492;FS=23.602;HRun=0;HaplotypeScore=143.6731;InbreedingCoeff=-0.4726;MQ=59.29;MQ0=12;MQRankSum=-10.818;QD=2.09;ReadPosRankSum=3.764;VQSLOD=1.1815;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:37,0:37:30.31:30,0,276	0/1:5,3:8:34.84:71,0,35	0/0:24,0:19:54.18:0,54,727	0/0:18,0:10:30.08:0,30,389	0/1:16,0:16:9.70:10,0,125	0/1:14,0:14:2.63:3,0,109	0/1:17,0:17:48.67:49,0,108	0/0:18,0:15:45.15:0,45,610	0/1:16,0:16:7.97:8,0,108	0/1:18,0:18:36.72:37,0,139	0/1:14,0:14:29.22:29,0,82	0/1:22,0:20:99:135,0,121	0/1:22,0:22:42.46:42,0,173	0/1:13,0:13:23.12:23,0,91	0/0:19,0:19:48.40:0,48,796	0/1:13,1:14:57.32:57,0,120	0/1:16,0:15:32.12:32,0,290	0/1:16,0:16:74.60:75,0,103	0/0:14,0:12:3.75:0,4,96	0/1:21,0:21:43.38:43,0,118	0/0:17,0:16:26.61:0,27,168	0/0:18,0:18:28.06:0,28,208	0/0:17,0:17:38.92:0,39,193	0/0:20,0:20:5.42:0,5,90	0/1:17,0:17:18.95:19,0,144	0/1:16,0:16:24.45:24,0,138	0/1:18,0:18:99:124,0,106	0/0:12,0:12:12:0,12,143
chr10	27082606	.	C	CTGTGTG	752.32	PASS	AC=2;AF=0.040;AN=50;BaseQRankSum=-4.274;DP=151;FS=1.625;HRun=0;HaplotypeScore=34.8685;InbreedingCoeff=0.3422;MQ=90.29;MQ0=0;MQRankSum=-4.448;QD=53.74;ReadPosRankSum=2.628;VQSLOD=3.2894;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:8:15:0,15,207	0/0:2,0:2:2.68:0,3,11	0/0:11,0:11:27.05:0,27,519	0/0:10,0:9:9.02:0,9,204	0/0:3,0:3:9.02:0,9,142	0/0:3,0:3:6:0,6,78	0/0:4,0:4:9.03:0,9,207	1/1:4,9:14:36.11:845,36,0	0/0:3,0:3:9.01:0,9,121	0/0:10,0:10:18.05:0,18,325	0/0:2,0:2:6.01:0,6,94	0/0:3,0:3:6.01:0,6,94	0/0:3,0:3:6.01:0,6,94	0/0:6,0:6:15.04:0,15,260	0/0:18,0:18:54.19:0,54,1243	0/0:1,0:1:3:0,3,25	./.	0/0:2,0:2:5.98:0,6,76	0/0:5,0:5:15.02:0,15,203	0/0:3,0:3:9.02:0,9,163	0/0:1,0:1:2.99:0,3,24	0/0:5,0:5:15.04:0,15,282	./.	0/0:4,0:4:6:0,6,73	0/0:10,0:10:18.06:0,18,396	0/0:5,0:5:12.03:0,12,195	0/0:5,0:5:12.04:0,12,231	./.
chr10	27082714	.	GTACA	G	1423.51	PASS	AC=36;AF=0.750;AN=48;BaseQRankSum=3.542;DP=280;FS=74.339;HRun=0;HaplotypeScore=83.9804;InbreedingCoeff=0.6322;MQ=64.52;MQ0=6;MQRankSum=-0.422;QD=9.68;ReadPosRankSum=2.781;VQSLOD=-0.6605;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:7:1.82:0,2,5	./.	0/0:17,0:7:6.02:0,6,124	0/0:15,0:9:11.71:0,12,184	1/1:5,6:11:11.79:108,12,0	1/1:3,4:7:2.50:9,2,0	1/1:3,1:4:6:71,6,0	0/0:16,0:16:32.98:0,33,620	1/1:4,1:5:3.01:35,3,0	1/1:6,1:7:15.02:181,15,0	./.	1/1:6,1:7:8.31:74,8,0	1/1:3,1:4:2.74:12,3,0	1/1:5,2:7:3:25,3,0	0/0:24,0:24:72.23:0,72,1609	1/1:4,0:4:6:51,6,0	0/0:21,0:20:39.01:0,39,776	1/1:11,0:11:15.94:106,16,0	1/1:5,0:2:3.01:38,3,0	1/1:10,4:14:18.04:220,18,0	1/1:15,0:15:9:94,9,0	1/1:5,1:6:6.02:93,6,0	1/1:3,2:5:3:25,3,0	1/1:11,2:13:8.91:66,9,0	./.	1/1:11,0:11:21.89:164,22,0	1/1:10,1:11:18.01:210,18,0	./.
chr10	27082737	.	C	CAT	1471.65	PASS	AB=0.949;AC=17;AF=0.447;AN=38;BaseQRankSum=-3.023;DP=284;FS=0.940;HRun=0;HaplotypeScore=88.7421;InbreedingCoeff=0.2777;MQ=49.60;MQ0=10;MQRankSum=-3.511;QD=10.22;ReadPosRankSum=-2.683;VQSLOD=2.8728;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:10,0:11:0:0,0,0	0/1:6,0:6:0:0,0,0	0/0:14,0:3:2.99:0,3,23	0/0:16,0:4:4.25:0,4,34	./.	./.	./.	1/1:6,20:28:63.16:931,63,0	0/0:3,0:5:2.98:0,3,22	1/1:3,0:7:6.37:35,6,0	./.	0/0:4,0:5:0.45:0,0,1	./.	0/1:3,0:6:0:0,0,0	0/0:24,0:24:57.16:0,57,698	0/1:3,0:3:0:0,0,0	0/1:3,18:20:11.64:503,0,12	0/1:8,0:8:8.65:9,0,14	1/1:4,0:6:4.82:35,5,0	1/1:8,0:13:0.92:2,1,0	./.	./.	0/1:1,0:11:0:0,0,0	0/1:9,0:11:0:0,0,0	./.	0/1:8,0:9:3.20:60,0,3	0/0:3,0:4:2.50:0,2,9	./.
chr10	27082744	.	A	ACG	327.41	PASS	AB=0.797;AC=10;AF=0.238;AN=42;BaseQRankSum=2.475;DP=283;FS=0.000;HRun=0;HaplotypeScore=89.6949;InbreedingCoeff=0.0781;MQ=48.37;MQ0=9;MQRankSum=-4.811;QD=3.03;ReadPosRankSum=1.863;VQSLOD=1.2063;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:4,7:11:0:0,0,0	./.	0/0:18,0:4:6.02:0,6,80	0/0:20,0:3:3.90:0,4,50	./.	0/0:6,0:6:0.47:0,0,1	./.	0/1:34,0:33:45.41:45,0,338	0/0:3,2:5:2.98:0,3,22	0/1:5,1:6:0.61:56,0,1	./.	0/0:3,2:5:2.69:0,3,7	0/0:3,3:6:0.47:0,0,1	0/1:3,2:5:0:0,0,0	0/0:21,0:21:63.21:0,63,1018	0/1:1,1:2:0:0,0,0	0/1:20,0:19:41.50:41,0,46	0/1:4,2:6:9.98:83,0,10	0/1:7,0:6:1.40:54,0,1	0/0:12,2:14:3.43:0,3,8	0/0:4,4:11:2.03:0,2,6	./.	0/0:11,0:11:0.89:0,1,2	0/1:4,4:9:0.13:0,0,0	./.	0/1:5,3:8:7.16:144,0,7	0/0:1,2:4:2.60:0,3,10	./.
chr10	27082943	.	A	AACAATGAGC	33883.57	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-7.135;DP=488;FS=33.343;HRun=0;HaplotypeScore=123.9778;InbreedingCoeff=0.9487;MQ=73.73;MQ0=0;MQRankSum=-12.270;QD=86.00;ReadPosRankSum=3.534;VQSLOD=3.0164;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,7:17:23.87:1000,24,0	1/1:1,4:5:12.04:564,12,0	0/0:17,0:17:45.12:0,45,984	0/0:14,0:14:26.68:0,27,613	1/1:10,9:20:39.13:1698,39,0	1/1:8,15:26:51.18:2309,51,0	1/1:8,5:15:24.08:970,24,0	0/0:34,0:34:72.23:0,72,1877	1/1:9,14:24:48.16:2206,48,0	1/1:4,13:18:48.11:1772,48,0	1/1:5,6:13:24.08:1127,24,0	1/1:8,13:21:48.16:2198,48,0	1/1:10,19:29:72.25:3329,72,0	1/1:11,9:21:27.09:1198,27,0	0/0:14,0:14:36.12:0,36,1018	1/1:7,12:19:39.13:1757,39,0	0/0:15,0:15:36.12:0,36,1020	1/1:5,2:7:18.06:729,18,0	1/1:10,7:19:36.04:1221,36,0	1/1:10,15:25:54.18:2251,54,0	1/1:6,2:11:9.03:423,9,0	1/1:8,10:19:33.11:1477,33,0	1/1:9,6:15:30.10:1337,30,0	1/1:3,5:9:15.05:689,15,0	1/1:7,9:16:30.10:1341,30,0	1/1:5,11:17:45.07:1595,45,0	1/1:8,16:26:54.19:2410,54,0	1/1:0,2:2:6.02:282,6,0
chr10	27084487	.	T	TACAC	2559.45	PASS	AC=44;AF=0.880;AN=50;BaseQRankSum=0.580;DP=334;FS=5.909;HRun=0;HaplotypeScore=96.5628;InbreedingCoeff=0.3446;MQ=57.46;MQ0=3;MQRankSum=-2.173;QD=10.32;ReadPosRankSum=-0.286;VQSLOD=2.4653;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:13:2.51:32,3,0	1/1:5,0:5:3.01:68,3,0	./.	./.	1/1:17,2:18:17.69:225,18,0	1/1:23,1:23:14.76:273,15,0	1/1:11,0:10:2.97:20,3,0	0/0:33,0:33:8.66:0,9,60	1/1:6,0:6:6.02:91,6,0	1/1:11,0:11:12.04:223,12,0	1/1:12,0:13:6.02:120,6,0	1/1:8,1:8:3.01:63,3,0	1/1:6,1:8:6.33:35,6,0	1/1:9,1:10:3.46:25,3,0	0/0:7,0:6:9.03:0,9,142	1/1:8,3:11:2.99:61,3,0	0/0:14,0:14:3:0,3,28	1/1:5,0:5:4.56:39,5,0	1/1:14,0:14:8.88:278,9,0	1/1:16,0:16:3.01:44,3,0	1/1:7,0:8:2.91:23,3,0	./.	1/1:6,0:6:3:27,3,0	1/1:5,0:5:5.69:142,6,0	1/1:15,0:16:9.03:169,9,0	1/1:15,1:16:27.09:474,27,0	1/1:17,0:16:14.79:189,15,0	1/1:1,1:2:3.01:58,3,0
chr10	27084527	.	A	ACAC	1430.88	PASS	AB=0.953;AC=29;AF=0.580;AN=50;BaseQRankSum=1.106;DP=299;FS=7.149;HRun=0;HaplotypeScore=100.3089;InbreedingCoeff=0.1184;MQ=41.78;MQ0=11;MQRankSum=-0.552;QD=6.30;ReadPosRankSum=0.230;VQSLOD=1.2420;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,1:8:0.49:25,0,0	1/1:2,2:4:4.08:71,4,0	./.	0/0:12,0:2:1.18:0,1,3	0/0:16,0:15:27.34:0,27,210	1/1:20,2:19:13.38:192,13,0	0/1:9,1:10:7.12:8,0,7	0/1:39,0:38:90.22:90,0,385	1/1:1,2:3:6.02:79,6,0	0/1:9,1:10:65.15:65,0,97	1/1:14,1:15:8.90:101,9,0	1/1:5,2:6:6:69,6,0	0/0:8,0:8:4.17:0,4,20	./.	0/0:8,0:6:18.05:0,18,303	1/1:2,4:7:2.66:36,3,0	0/1:19,0:18:22.38:22,0,24	0/1:6,0:6:6.30:60,0,6	0/1:17,0:17:55.48:55,0,186	0/0:7,1:8:1.55:0,2,4	0/0:4,0:4:4.56:0,5,44	./.	0/0:3,0:3:0:0,0,0	1/1:6,0:6:5.75:31,6,0	1/1:15,2:17:3.51:85,4,0	0/1:19,2:20:99:326,0,156	1/1:9,3:12:16.02:243,16,0	1/1:2,0:2:2.97:20,3,0
chr10	27084581	.	GTA	G	6685.77	PASS	AB=1.000;AC=47;AF=0.839;AN=56;BaseQRankSum=7.929;DP=378;FS=16.235;HRun=0;HaplotypeScore=79.1745;InbreedingCoeff=0.7176;MQ=55.83;MQ0=1;MQRankSum=-0.079;QD=22.36;ReadPosRankSum=6.030;VQSLOD=4.1281;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,14:15:30.01:360,30,0	1/1:0,4:4:12.04:153,12,0	0/0:12,0:7:3.01:0,3,39	0/1:17,0:5:9.83:10,0,93	1/1:1,13:14:27.09:344,27,0	1/1:2,22:23:36.12:458,36,0	1/1:2,9:11:21.07:267,21,0	0/0:39,1:40:55.07:0,55,1370	1/1:0,8:8:15.05:191,15,0	1/1:3,10:13:30.09:369,30,0	1/1:3,17:20:33.11:420,33,0	1/1:1,4:5:6.02:76,6,0	1/1:1,10:11:18.06:229,18,0	1/1:1,6:7:6.02:76,6,0	0/0:5,0:5:15.04:0,15,226	1/1:0,13:13:24.08:305,24,0	0/0:21,1:22:36.12:0,36,601	1/1:1,10:11:27.09:342,27,0	1/1:9,11:20:33.10:410,33,0	1/1:2,12:14:30.09:374,30,0	1/1:1,7:8:15.05:191,15,0	1/1:0,3:3:6.02:76,6,0	1/1:1,12:13:20.95:267,21,0	1/1:0,7:6:9.03:114,9,0	1/1:3,13:16:18.06:229,18,0	1/1:2,18:20:54.14:659,54,0	1/1:1,20:21:51.16:649,51,0	1/1:0,4:4:9.03:115,9,0
chr10	27085281	.	AC	A	8369.37	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=17.258;DP=564;FS=5.000;HRun=2;HaplotypeScore=294.3674;InbreedingCoeff=0.9414;MQ=85.69;MQ0=0;MQRankSum=-16.907;QD=20.41;ReadPosRankSum=7.720;VQSLOD=3.6403;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:8,23:31:69.08:656,69,0	1/1:3,7:10:21.04:205,21,0	0/0:34,0:35:92.01:0,92,1427	0/0:30,0:30:73.20:0,73,1183	1/1:5,19:24:57.01:511,57,0	1/1:6,16:22:45.06:430,45,0	1/1:10,10:20:30.04:283,30,0	0/0:30,0:30:87.29:0,87,1286	1/1:5,12:17:36.05:349,36,0	1/1:7,14:21:39.01:401,39,0	1/1:4,20:24:59.89:520,60,0	1/1:1,19:20:56.29:526,56,0	1/1:7,23:30:69.09:660,69,0	1/1:7,9:16:30:266,30,0	0/0:29,0:29:87.29:0,87,1302	1/1:1,15:16:45.08:445,45,0	0/0:30,0:30:90.30:0,90,1348	1/1:6,3:9:10.24:92,10,0	1/1:6,4:10:15.04:168,15,0	1/1:8,16:24:47.97:427,48,0	1/1:2,3:5:9.01:89,9,0	1/1:2,15:17:45.03:409,45,0	1/1:6,10:16:30.01:275,30,0	1/1:8,4:12:11.97:102,12,0	1/1:5,18:23:54.05:506,54,0	1/1:4,16:20:48.11:503,48,0	1/1:4,17:21:48.03:483,48,0	1/1:0,2:2:6.01:64,6,0
chr10	27085285	.	TGAGGCA	T	466.71	PASS	AB=0.947;AC=35;AF=0.625;AN=56;BaseQRankSum=11.059;DP=468;FS=0.000;HRun=0;HaplotypeScore=332.1428;InbreedingCoeff=0.4515;MQ=93.97;MQ0=0;MQRankSum=-13.270;QD=1.75;ReadPosRankSum=5.921;VQSLOD=0.8518;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:23:12.02:75,12,0	1/1:7,0:7:5.21:12,5,0	0/0:34,0:35:99:0,99,3224	0/0:29,0:29:78.27:0,78,2415	0/1:19,3:22:2.28:54,0,2	1/1:16,0:16:9.74:24,10,0	1/1:10,0:10:2.83:6,3,0	0/0:34,0:34:96.32:0,96,3304	1/1:12,0:12:5.86:11,6,0	1/1:14,0:14:23.28:76,23,0	0/1:21,0:21:16.84:60,0,17	0/1:19,0:19:2.21:8,0,2	1/1:25,0:25:3.47:16,3,0	0/0:10,0:10:5.49:0,5,19	0/0:30,0:30:90.31:0,90,3146	1/1:15,0:15:9.45:20,9,0	0/0:31,0:31:90.31:0,90,3130	1/1:3,0:3:7.62:32,8,0	1/1:5,0:5:11.60:39,12,0	0/0:16,0:16:0.42:0,0,3	1/1:4,0:4:4.23:18,4,0	0/0:15,2:17:2.50:0,3,8	0/1:10,2:12:4.56:23,0,5	1/1:4,0:4:0.36:9,0,0	1/1:18,0:18:7.93:41,8,0	1/1:17,0:17:24.96:78,25,0	0/1:17,0:17:7.89:25,0,8	1/1:2,0:2:4.19:12,4,0
chr10	27085286	.	G	GAA	13831.81	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=17.351;DP=467;FS=7.879;HRun=1;HaplotypeScore=256.9589;InbreedingCoeff=0.9385;MQ=93.07;MQ0=0;MQRankSum=-16.939;QD=44.91;ReadPosRankSum=8.529;VQSLOD=3.5157;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,23:23:69.13:1061,69,0	1/1:0,7:7:21.07:342,21,0	0/0:34,0:34:88.80:0,89,1430	0/0:28,0:28:63.92:0,64,1160	1/1:3,19:22:57.19:881,57,0	1/1:0,16:16:45.15:723,45,0	1/1:0,10:10:30.10:479,30,0	0/0:35,0:35:99:0,99,1496	1/1:1,11:12:36.11:553,36,0	1/1:0,14:14:39.13:650,39,0	1/1:1,20:21:63.20:952,63,0	1/1:0,19:19:57.17:894,57,0	1/1:1,24:25:69.24:1110,69,0	1/1:1,9:10:27.09:416,27,0	0/0:30,0:30:90.31:0,90,1378	1/1:1,14:15:42.14:681,42,0	0/0:32,0:32:93.30:0,93,1402	1/1:0,3:3:8.92:122,9,0	1/1:0,5:5:15.05:266,15,0	1/1:0,16:16:48.16:739,48,0	1/1:1,3:4:9.03:147,9,0	1/1:2,15:17:45.15:704,45,0	1/1:2,10:12:30.10:467,30,0	1/1:0,4:4:12.04:177,12,0	1/1:0,18:18:54.18:853,54,0	1/1:2,15:17:48.16:803,48,0	1/1:2,14:16:45.14:709,45,0	1/1:0,2:2:6.02:103,6,0
chr10	27085291	.	A	AATT	28328.29	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=17.095;DP=610;FS=6.583;HRun=0;HaplotypeScore=313.1575;InbreedingCoeff=0.9768;MQ=81.66;MQ0=0;MQRankSum=-17.864;QD=62.12;ReadPosRankSum=5.437;VQSLOD=3.7693;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,23:29:78.25:1664,78,0	1/1:5,7:12:36.12:809,36,0	0/0:31,0:31:90.31:0,90,1637	0/0:26,0:26:78.27:0,78,1407	1/1:17,19:36:96.29:1942,96,0	1/1:10,16:26:75.26:1719,75,0	1/1:10,10:20:57.20:1293,57,0	0/0:34,0:34:99:0,99,1815	1/1:8,11:19:54.19:1203,54,0	1/1:10,13:24:63.22:1458,63,0	1/1:6,20:26:78.27:1687,78,0	1/1:6,19:25:75.26:1672,75,0	1/1:5,24:29:81.24:1789,81,0	1/1:10,9:19:57.13:1118,57,0	0/0:32,0:32:96.33:0,96,1783	1/1:7,14:21:60.21:1342,60,0	0/0:31,0:31:93.32:0,93,1733	1/1:2,3:5:12.04:245,12,0	1/1:1,5:6:18.06:430,18,0	1/1:11,16:27:81.23:1729,81,0	1/1:5,3:8:21.07:425,21,0	1/1:8,15:23:63.22:1393,63,0	1/1:6,10:16:42.05:912,42,0	1/1:9,4:13:35.95:766,36,0	1/1:7,18:25:72.25:1575,72,0	1/1:6,16:22:63.22:1468,63,0	1/1:9,13:22:66.22:1477,66,0	1/1:1,2:3:9.03:211,9,0
chr10	27086047	.	AAG	A	621.22	PASS	AB=0.935;AC=17;AF=0.304;AN=56;BaseQRankSum=4.431;DP=493;FS=67.760;HRun=0;HaplotypeScore=167.0912;InbreedingCoeff=-0.3261;MQ=62.20;MQ0=8;MQRankSum=-1.091;QD=2.49;ReadPosRankSum=1.952;VQSLOD=0.5421;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:13,0:13:6.87:7,0,249	0/1:5,0:5:35.65:69,0,36	0/0:41,0:20:23.79:0,24,817	0/0:29,0:21:46.33:0,46,685	0/1:14,7:23:38.11:38,0,221	0/1:21,0:22:13.78:14,0,583	0/0:18,0:17:14.34:0,14,479	0/0:24,0:24:60.20:0,60,1081	0/1:12,1:13:29.74:30,0,154	0/0:24,0:24:7.87:0,8,1006	0/1:19,1:21:42.72:43,0,210	0/1:15,1:17:51.51:52,0,272	0/1:19,1:21:95.97:96,0,483	0/1:16,0:16:29.25:29,0,321	0/0:19,0:19:57.17:0,57,1053	0/1:10,0:12:22.86:23,0,316	0/0:27,0:27:76.49:0,76,1368	0/0:4,0:4:6.02:0,6,102	0/1:7,1:8:21.43:21,0,278	0/0:13,10:23:0.42:0,0,267	0/0:5,0:5:7.27:0,7,115	0/0:11,5:16:26.21:0,26,340	0/1:18,2:21:64.19:64,0,200	0/0:13,1:14:18.68:0,19,249	0/1:12,1:13:77.51:78,0,269	0/1:17,6:23:55.39:55,0,897	0/1:17,1:19:99:115,0,502	1/1:2,0:2:5.98:46,6,0
chr10	27086979	.	T	TA	14152.89	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-8.241;DP=565;FS=5.418;HRun=7;HaplotypeScore=53.6286;InbreedingCoeff=0.9989;MQ=79.21;MQ0=0;MQRankSum=-2.899;QD=30.18;ReadPosRankSum=4.365;VQSLOD=5.0574;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,16:21:45.14:544,45,0	1/1:0,14:14:39.12:471,39,0	0/0:16,0:16:36.04:0,36,340	0/0:13,0:13:33.04:0,33,313	1/1:3,29:32:84.26:1013,84,0	1/1:1,17:18:48.15:580,48,0	1/1:2,14:16:39.12:469,39,0	0/0:28,0:28:81.12:0,81,775	1/1:2,11:14:36.09:421,36,0	1/1:5,15:20:45.13:533,45,0	1/1:1,26:27:72.22:870,72,0	1/1:2,19:21:48.15:577,48,0	1/1:1,19:20:51.16:616,51,0	1/1:3,19:22:57.17:679,57,0	0/0:17,0:17:51.07:0,51,486	1/1:3,24:27:72.22:870,72,0	0/0:22,0:22:60:0,60,565	1/1:4,9:13:23.94:290,24,0	1/1:5,13:18:39.11:460,39,0	1/1:3,17:20:51.16:616,51,0	1/1:2,21:23:48.15:580,48,0	1/1:2,10:12:30.09:362,30,0	1/1:1,19:20:60.18:722,60,0	1/1:0,11:11:27.08:326,27,0	1/1:2,32:34:87.27:1051,87,0	1/1:0,25:25:75.22:894,75,0	1/1:6,23:29:69.21:833,69,0	1/1:0,12:12:33.08:376,33,0
chr10	27087740	.	A	AT	9338.85	PASS	AB=0.710;AC=45;AF=0.804;AN=56;BaseQRankSum=5.143;DP=474;FS=5.265;HRun=10;HaplotypeScore=85.1590;InbreedingCoeff=0.7288;MQ=70.09;MQ0=0;MQRankSum=-2.637;QD=24.26;ReadPosRankSum=4.460;VQSLOD=5.1260;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,11:13:36.01:368,36,0	0/1:1,8:9:0.57:199,0,1	0/0:14,0:13:11.38:0,11,130	0/1:8,0:7:2.58:3,0,85	1/1:6,28:34:53.52:763,54,0	1/1:2,13:15:39.10:416,39,0	1/1:3,8:11:24.06:256,24,0	0/0:32,0:35:43.26:0,43,482	1/1:4,11:15:27.07:288,27,0	1/1:2,25:27:72.18:766,72,0	1/1:4,19:23:57.14:608,57,0	1/1:2,14:16:39.10:416,39,0	1/1:3,17:20:42.11:448,42,0	1/1:0,8:8:18.05:192,18,0	0/0:21,0:21:50.92:0,51,419	1/1:4,14:18:42.11:448,42,0	0/0:18,1:19:12.99:0,13,312	1/1:2,9:11:24.06:256,24,0	0/1:3,6:9:5.05:170,0,5	1/1:0,17:17:45.07:467,45,0	1/1:2,11:13:11.45:327,11,0	1/1:1,13:14:14.48:359,14,0	1/1:0,18:18:51.13:544,51,0	1/1:1,9:10:24.06:256,24,0	1/1:3,15:18:42.11:448,42,0	1/1:6,11:17:11.92:329,12,0	1/1:4,24:28:28.91:719,29,0	1/1:2,11:13:8.44:295,8,0
chr10	27088579	.	GT	G	9816.35	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-3.904;DP=514;FS=2.821;HRun=9;HaplotypeScore=58.5763;InbreedingCoeff=0.9664;MQ=81.18;MQ0=0;MQRankSum=-3.519;QD=23.04;ReadPosRankSum=4.779;VQSLOD=5.5527;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,27:29:78.04:714,78,0	1/1:0,8:8:24.01:220,24,0	0/0:14,0:14:33.06:0,33,358	0/0:15,0:15:22.58:0,23,201	1/1:2,25:27:66.02:604,66,0	1/1:2,22:24:60.03:549,60,0	1/1:2,15:17:30.01:275,30,0	0/0:3,0:24:65.36:0,65,349	1/1:0,21:21:54.03:494,54,0	1/1:4,13:17:38.97:349,39,0	1/1:0,13:13:36.01:329,36,0	1/1:0,22:22:63.03:577,63,0	1/1:2,18:20:31.65:469,32,0	1/1:0,22:22:66.04:604,66,0	0/0:22,0:22:60.18:0,60,692	1/1:2,23:25:69.04:632,69,0	0/0:0,0:13:34.09:0,34,173	1/1:0,5:5:12:107,12,0	1/1:6,19:26:59.03:522,59,0	1/1:3,10:13:30.01:275,30,0	1/1:2,16:18:39.01:357,39,0	1/1:0,7:7:21.01:192,21,0	1/1:2,12:14:36.90:332,37,0	1/1:4,21:25:57.03:522,57,0	1/1:2,24:26:69.03:632,69,0	1/1:5,15:20:44.99:405,45,0	1/1:1,24:25:66.03:604,66,0	1/1:0,2:2:6:55,6,0
chr10	27088859	.	A	AAAT	14627.03	PASS	AB=1.000;AC=47;AF=0.839;AN=56;BaseQRankSum=-9.372;DP=345;FS=2.434;HRun=0;HaplotypeScore=43.0615;InbreedingCoeff=0.8868;MQ=72.04;MQ0=0;MQRankSum=-1.399;QD=54.58;ReadPosRankSum=3.231;VQSLOD=6.9515;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,9:11:27.09:585,27,0	1/1:0,9:9:27.09:596,27,0	0/0:5,0:5:12.04:0,12,193	0/1:8,0:8:1.14:1,0,118	1/1:4,17:21:51.17:1094,51,0	1/1:0,14:14:42.14:898,42,0	1/1:2,6:8:18.06:397,18,0	0/0:33,0:33:87.28:0,87,1351	1/1:0,6:6:18.06:397,18,0	1/1:0,13:14:39.13:860,39,0	1/1:1,18:19:51.18:1113,51,0	1/1:1,9:10:27.09:568,27,0	1/1:0,6:6:15.05:331,15,0	1/1:0,6:7:18.06:397,18,0	0/0:15,0:15:39.12:0,39,603	1/1:2,6:8:21.07:456,21,0	0/0:24,0:24:66.22:0,66,1057	1/1:1,7:9:15.05:331,15,0	1/1:4,9:14:33.10:687,33,0	1/1:0,10:11:30.10:651,30,0	1/1:2,4:6:12.04:265,12,0	1/1:0,8:9:21.07:463,21,0	1/1:1,9:10:27.09:566,27,0	1/1:0,5:5:15.05:331,15,0	1/1:0,13:13:39.13:860,39,0	1/1:2,16:18:54.17:1126,54,0	1/1:2,21:26:63.22:1388,63,0	1/1:1,4:5:12.04:265,12,0
chr10	27089072	.	GACATTGATGTTGAACAAATAGGAGA	G	27877.12	PASS	AC=44;AF=0.815;AN=54;BaseQRankSum=12.845;DP=339;FS=15.228;HRun=0;HaplotypeScore=244.9378;InbreedingCoeff=0.8386;MQ=93.52;MQ0=0;MQRankSum=-12.534;QD=121.73;ReadPosRankSum=9.177;VQSLOD=2.3468;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,6:13:18.06:981,18,0	1/1:3,3:6:9.03:606,9,0	0/0:22,0:22:57.16:0,57,4024	0/0:17,0:17:42.14:0,42,2685	1/1:6,10:16:24.08:1504,24,0	1/1:1,14:15:36.12:2423,36,0	1/1:1,4:5:9.03:606,9,0	0/0:36,0:36:99:0,99,8692	1/1:5,10:15:30.10:2019,30,0	1/1:2,5:7:15.05:1010,15,0	1/1:3,8:11:24.04:1433,24,0	1/1:1,8:9:18.06:1212,18,0	1/1:1,10:11:27.09:1817,27,0	1/1:1,6:7:15.05:1009,15,0	0/0:17,0:17:48.16:0,48,5220	1/1:2,6:8:15.05:1010,15,0	0/0:17,0:17:45.15:0,45,4296	./.	1/1:7,7:14:18.04:1033,18,0	1/1:4,12:16:33.07:2039,33,0	1/1:2,2:4:3.01:70,3,0	1/1:2,9:11:27.05:1635,27,0	1/1:1,3:4:6.02:404,6,0	1/1:3,3:6:3.01:202,3,0	1/1:3,9:12:27.09:1817,27,0	1/1:8,6:14:18.06:1212,18,0	1/1:4,18:22:51.18:3433,51,0	1/1:0,3:3:6.02:404,6,0
chr10	27089589	.	G	GCAATTA	38074.21	PASS	AB=1.000;AC=47;AF=0.839;AN=56;BaseQRankSum=-7.225;DP=636;FS=5.062;HRun=0;HaplotypeScore=117.7837;InbreedingCoeff=0.8949;MQ=64.63;MQ0=0;MQRankSum=-14.451;QD=71.03;ReadPosRankSum=0.439;VQSLOD=5.0379;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,11:23:39.13:1172,39,0	1/1:3,8:11:27.09:816,27,0	0/0:14,0:14:32.84:0,33,557	0/1:11,0:11:1.48:1,0,359	1/1:9,20:30:60.20:1570,60,0	1/1:7,25:32:81.28:2541,81,0	1/1:7,15:22:45.15:1229,45,0	0/0:29,0:29:75.22:0,75,1572	1/1:2,18:20:51.17:1658,51,0	1/1:6,16:23:63.21:1966,63,0	1/1:7,17:24:60.11:1597,60,0	1/1:2,26:29:75.26:2604,75,0	1/1:10,16:27:66.16:2089,66,0	1/1:6,24:30:72.24:2049,72,0	0/0:35,0:35:99:0,105,2329	1/1:5,25:30:81.28:2599,81,0	0/0:22,0:22:63.20:0,63,1369	1/1:0,3:3:9.03:246,9,0	1/1:9,10:20:48.16:1607,48,0	1/1:11,16:28:66.22:1872,66,0	1/1:4,7:13:15.05:474,15,0	1/1:8,19:27:60.20:1692,60,0	1/1:7,23:30:84.28:2187,84,0	1/1:3,9:13:30.10:975,30,0	1/1:7,20:27:66.23:2007,66,0	1/1:3,22:25:72.25:2305,72,0	1/1:15,19:34:78.27:2504,78,0	1/1:0,3:3:9.03:313,9,0
chr10	27090226	.	GGATAGATAAATA	G	8600.25	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=3.530;DP=563;FS=3.081;HRun=0;HaplotypeScore=216.1800;InbreedingCoeff=0.7998;MQ=61.76;MQ0=22;MQRankSum=0.714;QD=19.82;ReadPosRankSum=5.103;VQSLOD=3.5133;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:15:14.38:139,14,0	1/1:2,11:13:2.80:74,3,0	0/0:25,0:12:0.13:0,0,111	0/0:26,0:15:16:0,16,246	1/1:32,2:34:68.35:781,68,0	1/1:21,2:22:29.62:553,30,0	1/1:18,0:18:21:203,21,0	0/0:39,0:38:89.88:0,90,787	1/1:21,1:21:29.99:492,30,0	1/1:24,0:24:2.59:790,3,0	1/1:13,1:14:23.22:298,23,0	1/1:13,1:14:23.89:218,24,0	1/1:22,2:23:44.96:541,45,0	1/1:23,1:24:27.05:381,27,0	0/0:24,0:24:36.03:0,36,353	1/1:17,2:19:29.85:313,30,0	0/0:15,0:15:32.12:0,32,834	1/1:6,0:6:11.88:82,12,0	1/1:13,0:11:23.71:191,24,0	1/1:23,0:23:41.07:476,41,0	1/1:16,0:16:32.95:272,33,0	1/1:25,0:25:35.38:436,35,0	1/1:25,0:25:38.52:395,39,0	1/1:8,0:8:11.96:115,12,0	1/1:21,1:22:41.67:428,42,0	1/1:24,1:23:37.45:751,37,0	1/1:22,0:25:53.94:653,54,0	1/1:2,0:2:2.98:21,3,0
chr10	27090227	.	GATAGATAA	G	6478.35	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=4.044;DP=564;FS=3.884;HRun=0;HaplotypeScore=193.5728;InbreedingCoeff=0.8352;MQ=61.68;MQ0=22;MQRankSum=1.419;QD=14.93;ReadPosRankSum=4.962;VQSLOD=3.6551;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:17:12.50:113,12,0	1/1:12,0:12:2.97:28,3,0	0/0:25,0:12:0.13:0,0,111	0/0:26,0:15:16:0,16,247	1/1:35,0:35:68.23:620,68,0	1/1:24,0:23:32.53:351,33,0	1/1:18,0:18:20.98:178,21,0	0/0:40,0:39:92.85:0,93,808	1/1:22,0:21:29.91:297,30,0	1/1:23,0:23:22.74:520,23,0	1/1:13,0:13:23.31:227,23,0	1/1:14,0:14:23.89:199,24,0	1/1:24,0:23:44.16:386,44,0	1/1:25,0:25:27.56:207,28,0	0/0:24,0:24:36.03:0,36,329	1/1:19,0:19:29.83:238,30,0	0/0:15,0:15:31.73:0,32,639	1/1:6,0:6:11.88:82,12,0	1/1:12,0:10:23.66:171,24,0	1/1:17,6:23:41.82:516,42,0	1/1:15,0:15:32.95:272,33,0	1/1:24,0:24:35.54:320,36,0	1/1:25,0:25:37.57:305,38,0	1/1:8,0:8:11.94:91,12,0	1/1:18,4:22:41.71:435,42,0	1/1:25,0:23:49.63:463,50,0	1/1:26,0:26:53.52:440,54,0	1/1:2,0:2:2.98:21,3,0
chr10	27090235	.	A	AATAG	188.76	PASS	AB=1.000;AC=23;AF=0.500;AN=46;BaseQRankSum=-1.368;DP=547;FS=2.216;HRun=0;HaplotypeScore=193.2536;InbreedingCoeff=-0.1203;MQ=53.68;MQ0=23;MQRankSum=-0.876;QD=0.51;ReadPosRankSum=-5.428;VQSLOD=0.8771;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:19:0.89:2,1,0	0/0:11,0:11:2.94:0,3,18	./.	./.	0/1:32,0:32:16.73:17,0,34	0/1:24,0:23:16.97:17,0,32	0/1:16,0:16:0:0,0,0	1/1:35,0:33:2.49:6,2,0	0/1:20,0:19:5.72:78,0,6	0/1:20,0:20:28.94:36,0,29	0/1:18,0:18:16.23:16,0,25	1/1:14,0:14:2.92:17,3,0	0/1:24,0:23:11.52:12,0,27	0/0:23,0:23:8.81:0,9,54	./.	0/1:18,0:18:11.51:15,0,12	0/0:15,0:15:13.65:0,14,139	0/1:7,0:7:0:0,0,0	1/1:12,0:10:2.80:13,3,0	1/1:26,0:26:4.46:20,4,0	0/1:19,0:19:0.04:0,0,0	0/0:19,0:19:5.50:0,6,40	0/1:23,0:23:11.11:11,0,31	./.	0/1:22,0:22:6.97:34,0,7	0/1:22,0:21:19.37:19,0,46	0/0:28,0:28:5.23:0,5,126	./.
chr10	27090334	.	AGAT	A	7416.98	PASS	AB=0.941;AC=46;AF=0.821;AN=56;BaseQRankSum=8.801;DP=684;FS=1.021;HRun=0;HaplotypeScore=330.1252;InbreedingCoeff=0.4115;MQ=40.04;MQ0=13;MQRankSum=-4.376;QD=12.24;ReadPosRankSum=2.785;VQSLOD=4.0142;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:17:16.13:116,16,0	1/1:17,0:16:4.06:144,4,0	0/0:24,0:7:14.69:0,15,209	0/0:23,0:9:14.87:0,15,175	1/1:38,0:33:26.89:376,27,0	1/1:35,0:29:50.05:539,50,0	1/1:11,0:11:6.21:38,6,0	0/1:27,6:31:99:211,0,814	1/1:21,1:21:17.46:203,17,0	1/1:33,0:31:37.31:495,37,0	1/1:24,0:23:39.44:452,39,0	1/1:24,0:18:10.63:129,11,0	1/1:34,0:30:50.84:550,51,0	1/1:26,0:22:18.09:286,18,0	0/0:31,0:31:90.31:0,90,1749	1/1:26,0:21:19.39:198,19,0	0/1:13,0:13:99:124,0,109	0/1:4,0:4:14.97:17,0,15	0/1:10,1:11:72.13:86,0,72	1/1:39,1:37:58.17:697,58,0	1/1:11,0:11:8.92:136,9,0	1/1:35,0:28:41.81:478,42,0	1/1:22,0:21:22.82:266,23,0	1/1:8,0:8:3.01:46,3,0	1/1:34,0:31:9.01:285,9,0	1/1:32,0:28:33.47:467,33,0	1/1:50,0:47:49.04:922,49,0	1/1:6,0:6:12.03:157,12,0
chr10	27090337	.	T	TA	11417.22	PASS	AB=0.762;AC=47;AF=0.839;AN=56;BaseQRankSum=9.146;DP=687;FS=2.243;HRun=1;HaplotypeScore=310.7357;InbreedingCoeff=0.4964;MQ=39.18;MQ0=16;MQRankSum=-5.656;QD=18.81;ReadPosRankSum=3.942;VQSLOD=4.3057;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,8:17:17.54:250,18,0	1/1:6,10:15:7.20:183,7,0	0/0:26,0:7:14.87:0,15,209	0/0:24,0:8:14.58:0,15,175	1/1:11,27:33:26.73:385,27,0	1/1:9,25:28:53.40:804,53,0	1/1:6,7:13:4.80:133,5,0	0/1:33,1:32:20.97:21,0,696	1/1:4,17:20:29.35:477,29,0	1/1:8,26:32:86.86:1278,87,0	1/1:11,13:23:38.31:484,38,0	1/1:5,19:18:17.27:263,17,0	1/1:9,26:31:57.84:897,58,0	1/1:9,17:22:17.60:327,18,0	0/0:30,0:30:90.30:0,90,1258	1/1:12,14:22:29.78:443,30,0	0/1:7,7:14:66.79:161,0,67	1/1:3,1:4:8.99:92,9,0	0/1:5,6:11:56.94:302,0,57	1/1:15,23:36:55.21:799,55,0	1/1:3,7:10:9.03:140,9,0	1/1:12,26:31:41.66:644,42,0	1/1:7,15:21:22.47:379,22,0	1/1:2,5:7:3.01:47,3,0	1/1:15,17:29:26.59:383,27,0	1/1:11,19:28:52.70:1031,53,0	1/1:16,33:46:69.14:1364,69,0	1/1:6,0:6:12.01:131,12,0
chr10	27090345	.	A	AGAT	9653.54	PASS	AB=0.749;AC=24;AF=0.429;AN=56;BaseQRankSum=0.358;DP=681;FS=7.888;HRun=0;HaplotypeScore=328.8190;InbreedingCoeff=-0.4101;MQ=34.93;MQ0=20;MQRankSum=-4.379;QD=17.94;ReadPosRankSum=7.169;VQSLOD=3.5019;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:10,6:16:6.09:280,0,6	0/1:10,5:14:54.94:55,0,65	0/0:29,0:5:12.04:0,12,178	0/0:25,0:4:5.54:0,6,55	0/1:24,12:31:27.23:141,0,27	0/1:17,16:27:65.36:761,0,65	0/1:10,4:14:20.92:124,0,21	0/0:29,0:27:62.50:0,63,951	1/1:10,9:19:7.93:558,8,0	0/1:24,14:36:99:1187,0,291	0/1:21,4:24:89.33:176,0,89	0/1:12,11:17:22.51:294,0,23	0/1:18,16:30:55.99:923,0,56	0/1:21,7:24:53.85:257,0,54	0/0:31,0:31:87.30:0,87,1415	0/1:17,10:22:73.23:412,0,73	0/0:15,0:15:18.50:0,19,251	1/1:2,0:2:3.01:42,3,0	0/1:6,5:11:80.89:351,0,81	0/1:27,14:38:50.73:560,0,51	0/0:7,0:7:2.75:0,3,32	0/1:22,16:31:39.33:755,0,39	1/1:14,10:23:3.81:453,4,0	0/0:5,2:7:0.89:0,1,2	0/1:22,8:27:99:301,0,124	0/1:12,16:24:47.90:911,0,48	0/1:33,15:46:99:1096,0,137	0/1:6,0:6:16.35:16,0,24
chr10	27090359	.	ATAAG	A	5742.15	PASS	AB=0.889;AC=37;AF=0.685;AN=54;BaseQRankSum=2.661;DP=666;FS=0.000;HRun=0;HaplotypeScore=326.7547;InbreedingCoeff=0.0416;MQ=31.72;MQ0=21;MQRankSum=-3.084;QD=10.15;ReadPosRankSum=-1.940;VQSLOD=3.2247;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:15,2:17:11.11:86,11,0	0/1:8,6:13:11.83:101,0,12	0/0:34,0:4:6.02:0,6,84	0/0:27,0:3:2.22:0,2,7	1/1:25,9:29:17.46:159,17,0	1/1:28,6:28:14.73:421,15,0	1/1:11,3:14:2.58:92,3,0	0/1:32,0:29:99:505,0,351	0/1:18,0:17:64.13:104,0,64	0/1:41,1:40:99:490,0,240	1/1:26,0:25:21.64:216,22,0	1/1:18,5:17:22.45:188,22,0	1/1:27,6:29:1.12:323,1,0	1/1:19,9:24:32.07:318,32,0	0/0:27,0:27:78.27:0,78,1873	0/1:18,9:22:34.35:280,0,34	0/1:15,0:15:18.39:18,0,164	1/1:2,0:2:1.82:5,2,0	0/1:11,0:10:23.73:24,0,178	1/1:34,0:31:35.75:362,36,0	0/0:6,0:6:0:0,0,0	1/1:26,8:27:44.34:348,44,0	1/1:19,4:22:21.35:186,21,0	./.	1/1:14,12:23:46.96:435,47,0	0/1:23,7:26:99:370,0,274	0/1:30,13:40:99:519,0,114	1/1:1,5:6:12.12:191,12,0
chr10	27090384	.	TGATA	T	11183.24	PASS	AB=0.806;AC=45;AF=0.804;AN=56;BaseQRankSum=2.812;DP=646;FS=1.196;HRun=0;HaplotypeScore=260.4807;InbreedingCoeff=0.6172;MQ=40.89;MQ0=11;MQRankSum=-4.208;QD=19.90;ReadPosRankSum=2.237;VQSLOD=4.5633;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,3:18:5.80:104,6,0	0/1:2,9:15:67.98:337,0,68	0/0:30,0:11:26.93:0,27,640	0/0:24,0:9:19.78:0,20,426	1/1:6,18:32:35.72:614,36,0	1/1:7,16:27:48.16:833,48,0	1/1:1,7:14:5.22:103,5,0	1/1:1,19:31:60.58:920,61,0	1/1:5,7:17:15.05:228,15,0	1/1:5,19:33:22.39:1120,22,0	1/1:7,19:28:29.22:502,29,0	1/1:0,11:14:24.01:367,24,0	1/1:5,12:26:15.96:519,16,0	1/1:2,17:21:23.77:382,24,0	0/0:28,0:28:72.25:0,72,1791	1/1:1,16:19:20.06:572,20,0	1/1:8,2:22:26.74:226,27,0	0/0:1,0:2:3.01:0,3,35	0/1:4,2:7:6.97:161,0,7	1/1:9,15:31:32.13:569,32,0	0/1:6,0:7:0:0,0,0	1/1:6,13:21:29.39:510,29,0	1/1:4,10:20:10.99:199,11,0	1/1:2,2:6:3.01:52,3,0	1/1:6,16:27:53.87:938,54,0	1/1:3,13:24:16.22:793,16,0	1/1:3,22:35:18.02:791,18,0	1/1:0,6:8:21.07:342,21,0
chr10	27090387	.	TA	T	2444.75	PASS	AB=0.952;AC=37;AF=0.661;AN=56;BaseQRankSum=5.016;DP=656;FS=6.194;HRun=1;HaplotypeScore=275.5455;InbreedingCoeff=0.1329;MQ=43.70;MQ0=9;MQRankSum=-3.413;QD=4.28;ReadPosRankSum=4.693;VQSLOD=0.2741;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:16,1:18:4.38:35,4,0	0/1:15,1:15:49.15:49,0,72	0/0:30,0:13:30.51:0,31,556	0/0:25,0:11:8.15:0,8,320	1/1:36,1:32:25.92:114,26,0	1/1:34,0:28:35.34:131,35,0	0/1:13,1:14:7.61:8,0,19	1/1:22,11:31:70.86:464,71,0	1/1:13,5:17:12.01:73,12,0	0/1:33,3:34:99:178,0,179	1/1:28,1:28:24.64:129,25,0	0/1:20,1:15:7.54:60,0,8	0/1:29,1:26:6.70:71,0,7	0/1:25,0:21:8.29:31,0,8	0/0:28,0:28:84.27:0,84,1311	0/1:25,1:21:16.50:51,0,17	1/1:18,6:24:39.12:329,39,0	0/0:2,0:2:3.01:0,3,48	0/1:8,0:8:21.11:21,0,93	1/1:34,0:31:24.77:103,25,0	0/1:7,0:7:0:0,0,0	1/1:28,0:21:22.86:121,23,0	1/1:18,3:20:9.23:61,9,0	1/1:6,0:6:2.04:6,2,0	1/1:29,2:28:39.37:125,39,0	0/1:25,3:24:62.83:204,0,63	0/1:33,5:35:37.36:180,0,37	1/1:7,1:8:16.95:72,17,0
chr10	27090473	.	GCA	G	14408.98	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=9.597;DP=610;FS=13.088;HRun=0;HaplotypeScore=103.1013;InbreedingCoeff=0.9833;MQ=68.84;MQ0=1;MQRankSum=-3.384;QD=30.66;ReadPosRankSum=7.284;VQSLOD=5.9066;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,13:13:36.12:458,36,0	1/1:2,5:7:18.04:216,18,0	0/0:25,0:23:45.34:0,45,714	0/0:24,0:23:50.20:0,50,805	1/1:2,27:29:81.26:1031,81,0	1/1:6,18:23:42.13:534,42,0	1/1:4,12:16:30.10:382,30,0	0/0:44,0:44:99:0,105,1755	1/1:5,21:25:48.15:611,48,0	1/1:2,30:32:86.96:1094,87,0	1/1:2,20:22:54.17:688,54,0	1/1:2,15:17:42.13:534,42,0	1/1:4,25:28:66.21:840,66,0	1/1:2,13:15:39.12:496,39,0	0/0:31,0:31:84.29:0,84,1399	1/1:3,26:28:69.20:878,69,0	0/0:16,0:16:39.13:0,39,652	1/1:1,3:4:9.03:115,9,0	1/1:3,9:12:27.08:335,27,0	1/1:5,16:21:48.15:611,48,0	1/1:3,18:21:57.18:726,57,0	1/1:1,12:13:33.11:420,33,0	1/1:3,17:20:51.16:649,51,0	1/1:2,10:11:24.08:305,24,0	1/1:4,30:34:81.26:1031,81,0	1/1:6,19:24:54.17:687,54,0	1/1:3,37:40:99:1462,117,0	1/1:1,8:9:24.08:306,24,0
chr10	27092749	.	T	TG	986.32	PASS	AC=4;AF=0.077;AN=52;BaseQRankSum=-7.142;DP=506;FS=0.000;HRun=5;HaplotypeScore=79.2894;InbreedingCoeff=0.9094;MQ=47.35;MQ0=21;MQRankSum=-0.250;QD=21.44;ReadPosRankSum=0.112;VQSLOD=2.6355;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:52.55:0,53,668	0/0:10,0:10:27.07:0,27,290	./.	./.	0/0:17,0:17:30.07:0,30,322	0/0:18,0:17:36.08:0,36,387	0/0:16,0:14:36.07:0,36,378	1/1:9,11:17:33.03:396,33,0	0/0:26,0:26:66.16:0,66,709	0/0:28,0:27:63.15:0,63,671	0/0:12,0:11:21.05:0,21,225	0/0:24,0:23:60.06:0,60,629	0/0:21,0:18:45.05:0,45,462	0/0:23,0:22:54.11:0,54,580	0/0:25,0:25:54.13:0,54,580	0/0:19,0:18:45.11:0,45,483	1/1:4,22:25:54.18:710,54,0	0/0:12,0:12:29.81:0,30,301	0/0:19,0:17:42.03:0,42,427	0/0:20,0:20:51.12:0,51,541	0/0:24,0:17:48.10:0,48,506	0/0:19,0:19:48.05:0,48,501	0/0:10,0:10:18.04:0,18,193	0/0:27,0:26:69.13:0,69,729	0/0:18,0:18:51.11:0,51,539	0/0:21,0:19:48.12:0,48,516	0/0:17,0:16:39.10:0,39,418	0/0:2,0:1:3.01:0,3,32
chr10	27093897	.	A	AT	7358.73	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=1.565;DP=440;FS=10.255;HRun=1;HaplotypeScore=87.3412;InbreedingCoeff=0.9216;MQ=75.26;MQ0=0;MQRankSum=-2.163;QD=20.85;ReadPosRankSum=3.356;VQSLOD=4.1160;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:17:20.40:323,20,0	1/1:3,0:3:6.01:58,6,0	0/0:12,0:8:11.10:0,11,109	0/0:14,0:14:15.16:0,15,112	1/1:24,0:25:39.62:344,40,0	1/1:18,1:19:20.20:304,20,0	1/1:13,4:17:42.04:458,42,0	0/0:26,0:27:65.65:0,66,548	1/1:18,2:20:50.94:500,51,0	1/1:11,0:11:26.22:244,26,0	1/1:16,2:18:32.38:335,32,0	1/1:9,1:10:24.06:273,24,0	1/1:15,0:16:38.21:365,38,0	1/1:16,1:18:39.55:411,40,0	0/0:17,0:17:47.13:0,47,555	1/1:11,1:12:21.05:233,21,0	0/0:15,0:15:35.96:0,36,301	1/1:6,0:6:15.03:154,15,0	1/1:21,1:22:38.85:538,39,0	1/1:18,1:19:23.25:210,23,0	1/1:4,0:4:6:54,6,0	1/1:10,2:12:26.99:259,27,0	1/1:15,1:16:35.35:388,35,0	1/1:13,1:14:27.07:313,27,0	1/1:17,1:17:10.24:300,10,0	1/1:14,1:15:25.81:384,26,0	1/1:25,2:28:55.23:636,55,0	1/1:13,0:13:27.06:276,27,0
chr10	27093898	.	T	TTAA	9970.49	PASS	AB=1.000;AC=47;AF=0.839;AN=56;BaseQRankSum=2.660;DP=512;FS=1.648;HRun=0;HaplotypeScore=121.2314;InbreedingCoeff=0.7837;MQ=72.10;MQ0=0;MQRankSum=-3.032;QD=22.76;ReadPosRankSum=-0.321;VQSLOD=4.7809;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,0:18:34.92:457,35,0	1/1:0,0:3:6.02:75,6,0	0/1:11,0:7:5.18:5,0,115	0/0:14,0:13:12.47:0,12,104	1/1:10,0:35:59.80:542,60,0	1/1:6,1:28:36.09:486,36,0	1/1:4,0:17:41.49:458,41,0	0/0:9,0:26:1.54:0,2,586	1/1:3,3:21:50.09:695,50,0	1/1:4,0:16:35.26:305,35,0	1/1:10,0:23:47.91:476,48,0	1/1:2,1:14:24.47:321,24,0	1/1:3,1:19:41.84:521,42,0	1/1:2,0:19:42.02:502,42,0	0/0:15,0:17:51.09:0,51,772	1/1:3,0:15:21.04:262,21,0	0/0:4,0:16:39.07:0,39,445	1/1:4,0:9:21.03:258,21,0	1/1:6,1:28:49.94:682,50,0	1/1:5,0:22:23.67:293,24,0	1/1:4,0:4:6:54,6,0	1/1:4,2:14:32.93:438,33,0	1/1:14,0:20:53.61:552,54,0	1/1:2,2:16:30.03:429,30,0	1/1:12,1:20:36.02:461,36,0	1/1:4,1:19:48:583,48,0	1/1:7,0:33:60.15:761,60,0	1/1:1,0:13:27.09:353,27,0
chr10	27094457	.	GTCAGGAGGTGCGTATGTTACTGCATGCCTT	G	23462.67	PASS	AC=44;AF=0.815;AN=54;BaseQRankSum=13.134;DP=437;FS=16.254;HRun=0;HaplotypeScore=333.9124;InbreedingCoeff=0.7873;MQ=86.55;MQ0=0;MQRankSum=-11.371;QD=78.21;ReadPosRankSum=6.534;VQSLOD=2.1820;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:8,13:21:18.06:1207,18,0	1/1:1,5:6:9.50:715,10,0	0/0:23,0:23:66.23:0,66,4195	0/0:17,0:17:48.04:0,48,2612	1/1:12,8:20:18.06:743,18,0	1/1:11,10:21:21.07:1678,21,0	1/1:4,7:11:6.02:474,6,0	0/0:35,0:35:99:0,102,8268	1/1:6,10:16:21.07:1678,21,0	1/1:7,7:14:21.04:1460,21,0	1/1:3,6:9:9.03:515,9,0	1/1:6,3:9:9.03:719,9,0	1/1:8,11:19:27.09:1955,27,0	1/1:10,7:17:18.06:1339,18,0	0/0:30,0:30:87.30:0,87,10469	1/1:5,4:9:12.04:959,12,0	0/0:22,0:22:57.20:0,57,7095	1/1:2,1:3:3.01:240,3,0	./.	1/1:6,10:16:24.08:1622,24,0	1/1:8,5:13:6.02:383,6,0	1/1:8,12:20:23.03:1726,23,0	1/1:10,7:17:13.29:960,13,0	1/1:1,3:4:2.08:238,2,0	1/1:9,7:16:18.06:1434,18,0	1/1:5,10:15:24.07:1504,24,0	1/1:12,10:22:21.07:1678,21,0	1/1:0,2:2:3.01:240,3,0
chr10	27094645	.	AC	A	12298.50	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=13.395;DP=591;FS=0.843;HRun=7;HaplotypeScore=115.6955;InbreedingCoeff=0.9859;MQ=78.23;MQ0=0;MQRankSum=-7.388;QD=25.95;ReadPosRankSum=5.857;VQSLOD=3.8115;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,32:40:93.21:948,93,0	1/1:0,4:4:9.02:92,9,0	0/0:24,1:25:40.72:0,41,680	0/0:15,0:14:41.48:0,41,468	1/1:1,16:17:45.10:459,45,0	1/1:4,24:28:66.15:673,66,0	1/1:1,21:22:54.12:551,54,0	0/0:23,0:23:60.14:0,60,726	1/1:2,10:12:27.06:275,27,0	1/1:2,19:21:60.13:611,60,0	1/1:1,19:20:48.11:490,48,0	1/1:2,22:24:54.12:551,54,0	1/1:3,20:23:57.12:581,57,0	1/1:2,20:22:57.13:581,57,0	0/0:20,0:20:54.17:0,54,679	1/1:0,17:17:48.11:490,48,0	0/0:34,0:34:99:0,99,1203	1/1:0,21:21:63.14:643,63,0	1/1:3,14:17:39.08:397,39,0	1/1:1,20:21:57.13:582,57,0	1/1:3,20:23:54.12:551,54,0	1/1:1,10:11:30.07:306,30,0	1/1:1,23:24:63.14:643,63,0	1/1:0,21:21:51.12:520,51,0	1/1:2,14:16:39.09:397,39,0	1/1:2,35:37:99:1040,102,0	1/1:1,22:23:63.14:643,63,0	1/1:1,9:10:27.06:275,27,0
chr10	27096683	.	G	GA	1351.96	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-7.092;DP=531;FS=12.829;HRun=7;HaplotypeScore=61.6603;InbreedingCoeff=0.9828;MQ=79.57;MQ0=0;MQRankSum=-0.951;QD=28.77;ReadPosRankSum=-4.595;VQSLOD=1.4063;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:8:18.02:0,18,174	0/0:8,0:8:24.04:0,24,232	0/0:14,0:14:16.67:0,17,197	0/0:11,0:11:26.94:0,27,246	0/0:32,0:32:87.11:0,87,828	0/0:24,0:24:63.10:0,63,608	0/0:12,0:12:30.03:0,30,283	1/1:3,33:36:99:1184,99,0	0/0:17,0:17:39.06:0,39,376	0/0:29,0:29:72.11:0,72,695	0/0:24,0:24:60.09:0,60,579	0/0:16,0:16:45.06:0,45,429	0/0:27,0:27:69.10:0,69,666	0/0:17,0:17:48.08:0,48,464	0/0:23,0:23:69.10:0,69,661	0/0:11,0:11:30.05:0,30,290	1/1:4,7:11:25.89:290,26,0	0/0:18,0:18:42.07:0,42,405	0/0:18,0:18:45.04:0,45,426	0/0:23,0:23:63.10:0,63,608	0/0:16,0:16:42.06:0,42,405	0/0:25,0:25:63.10:0,63,608	0/0:24,0:24:62.84:0,63,608	0/0:9,0:9:27.01:0,27,253	0/0:23,0:23:66.09:0,66,632	0/0:22,0:22:63.09:0,63,606	0/0:25,0:25:63.04:0,63,589	0/0:8,0:8:18.03:0,18,173
chr10	27096751	.	A	AT	12818.26	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-7.612;DP=522;FS=3.413;HRun=7;HaplotypeScore=52.3733;InbreedingCoeff=0.9801;MQ=72.06;MQ0=1;MQRankSum=-1.411;QD=27.99;ReadPosRankSum=-0.246;VQSLOD=5.3457;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,14:18:39.12:470,39,0	1/1:1,9:11:26.95:305,27,0	0/0:20,0:19:38.89:0,39,358	0/0:15,0:14:21.83:0,22,278	1/1:5,33:38:96.29:1160,96,0	1/1:0,16:16:45.14:544,45,0	1/1:3,10:13:33.03:381,33,0	1/1:8,1:24:46.10:240,46,0	1/1:1,17:19:47.98:558,48,0	1/1:5,16:21:48.12:556,48,0	1/1:0,16:16:45.14:539,45,0	1/1:2,8:10:24.07:290,24,0	1/1:3,21:24:57.17:689,57,0	1/1:1,19:20:54.17:652,54,0	0/0:29,0:29:81.13:0,81,782	1/1:1,8:9:18.06:217,18,0	1/1:4,0:22:40.94:217,41,0	1/1:1,15:16:42.13:503,42,0	1/1:0,18:18:51.15:606,51,0	1/1:2,27:29:78.07:890,78,0	1/1:1,5:6:12.04:145,12,0	1/1:0,11:11:33.10:399,33,0	1/1:2,20:22:51.16:616,51,0	1/1:3,5:8:18:201,18,0	1/1:2,23:25:69.21:834,69,0	1/1:0,21:21:63.18:748,63,0	1/1:4,25:28:40.47:769,40,0	1/1:2,10:12:24.07:290,24,0
chr10	27097152	.	T	TA	18363.49	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-4.885;DP=650;FS=0.000;HRun=7;HaplotypeScore=71.2850;InbreedingCoeff=0.9197;MQ=74.23;MQ0=0;MQRankSum=-4.936;QD=30.55;ReadPosRankSum=3.073;VQSLOD=4.8695;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,26:26:75.19:889,75,0	1/1:2,13:15:36.11:435,36,0	0/0:14,0:14:5.90:0,6,232	0/0:9,0:9:6.32:0,6,185	1/1:2,33:35:96.29:1159,96,0	1/1:1,24:25:66.20:797,66,0	1/1:2,12:14:33.10:399,33,0	1/1:4,26:30:75.20:882,75,0	1/1:4,10:14:33.10:397,33,0	1/1:5,28:33:84.19:974,84,0	1/1:2,26:28:81.25:973,81,0	1/1:1,22:23:63.19:761,63,0	1/1:4,28:32:78.24:942,78,0	1/1:1,14:15:42.13:507,42,0	0/0:26,0:26:78.09:0,78,740	1/1:5,19:24:48.15:579,48,0	1/1:3,10:13:27.55:327,28,0	1/1:2,10:12:30.98:364,31,0	1/1:3,27:30:84.21:980,84,0	1/1:5,31:36:96.29:1148,96,0	1/1:1,13:14:33.10:399,33,0	1/1:3,18:22:42.13:504,42,0	1/1:1,23:24:66.20:797,66,0	1/1:3,19:22:48.15:580,48,0	1/1:1,32:33:90.28:1087,90,0	1/1:6,31:37:94.45:1066,94,0	1/1:2,35:37:96.29:1160,96,0	1/1:0,7:7:21.06:254,21,0
chr10	27097876	.	T	TTTTG	21702.01	PASS	AC=44;AF=0.815;AN=54;BaseQRankSum=-11.007;DP=729;FS=3.531;HRun=0;HaplotypeScore=103.3607;InbreedingCoeff=0.9934;MQ=66.40;MQ0=3;MQRankSum=3.610;QD=39.46;ReadPosRankSum=4.847;VQSLOD=4.6845;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,34:49:81.28:1918,81,0	1/1:7,11:18:21.07:455,21,0	0/0:31,0:27:18.02:0,18,232	0/0:42,0:35:39.08:0,39,543	1/1:12,23:35:66.22:1452,66,0	1/1:7,20:28:48.16:1148,48,0	1/1:6,12:18:18.06:431,18,0	0/0:38,0:37:48.12:0,48,671	1/1:7,12:19:33.11:790,33,0	1/1:9,12:21:36.11:786,36,0	1/1:5,16:21:51.17:1094,51,0	1/1:5,16:22:24.04:572,24,0	1/1:11,18:29:51.17:1220,51,0	1/1:2,19:22:45.15:1074,45,0	0/0:27,0:27:39.12:0,39,600	1/1:7,12:18:30.10:718,30,0	0/0:40,0:40:83.84:0,84,1252	1/1:8,8:18:20.93:446,21,0	1/1:15,8:24:36.11:713,36,0	1/1:5,15:21:45.15:1056,45,0	1/1:8,17:26:42.14:994,42,0	1/1:4,15:18:42.14:1003,42,0	1/1:5,16:21:34.06:791,34,0	1/1:6,21:26:45.15:1077,45,0	1/1:6,15:21:39.13:933,39,0	1/1:8,25:33:75.24:1670,75,0	1/1:10,24:36:57.20:1362,57,0	./.
chr10	27098083	.	AT	A	14239.17	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-2.084;DP=583;FS=13.069;HRun=7;HaplotypeScore=58.9141;InbreedingCoeff=0.9610;MQ=80.50;MQ0=0;MQRankSum=-5.353;QD=26.57;ReadPosRankSum=3.691;VQSLOD=4.6189;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,27:31:72.16:734,72,0	1/1:1,9:10:27.06:275,27,0	0/0:16,0:16:39.11:0,39,458	0/0:15,0:15:36.11:0,36,435	1/1:0,27:27:81.14:816,81,0	1/1:0,32:32:90.20:918,90,0	1/1:3,11:14:33.07:337,33,0	1/1:4,27:31:81.17:819,81,0	1/1:2,23:25:66.15:673,66,0	1/1:1,20:21:60.12:606,60,0	1/1:2,12:14:36.08:367,36,0	1/1:1,22:23:60.14:612,60,0	1/1:1,27:28:72.16:735,72,0	1/1:1,20:21:60.13:612,60,0	0/0:16,0:16:48.15:0,48,593	1/1:1,23:24:60.14:612,60,0	1/1:1,26:27:66.11:662,66,0	1/1:1,8:9:21.05:214,21,0	1/1:3,14:17:42.09:425,42,0	1/1:1,25:26:72.16:735,72,0	1/1:0,10:10:24.05:245,24,0	1/1:1,17:18:48.11:490,48,0	1/1:4,13:17:39.09:398,39,0	1/1:1,13:14:36.08:367,36,0	1/1:2,29:31:84.19:857,84,0	1/1:5,31:36:93.17:933,93,0	1/1:2,26:28:72.16:734,72,0	1/1:0,2:2:6.01:61,6,0
chr10	27099853	.	CA	C	3971.25	PASS	AB=0.746;AC=46;AF=0.821;AN=56;BaseQRankSum=0.100;DP=472;FS=7.737;HRun=14;HaplotypeScore=86.3595;InbreedingCoeff=0.4432;MQ=54.96;MQ0=10;MQRankSum=1.273;QD=9.69;ReadPosRankSum=3.713;VQSLOD=2.9621;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:9,20:31:60.52:402,61,0	1/1:3,3:6:13.42:83,13,0	0/0:7,0:4:9.01:0,9,84	0/1:7,2:6:23.84:24,0,40	1/1:9,18:25:19.96:263,20,0	1/1:7,8:15:17.82:123,18,0	1/1:6,11:18:34.30:231,34,0	0/0:15,0:32:26.43:0,26,210	1/1:5,10:16:25.80:170,26,0	1/1:5,4:9:17.78:99,18,0	1/1:7,10:19:24.83:156,25,0	1/1:6,14:21:45.69:300,46,0	1/1:9,7:18:10.79:159,11,0	1/1:6,9:15:15.30:132,15,0	0/1:8,2:10:20.20:20,0,106	0/1:9,8:18:2.10:194,0,2	0/0:11,0:19:17.23:0,17,109	0/1:7,6:14:9.26:103,0,9	1/1:6,10:17:40.60:267,41,0	1/1:15,7:20:28.81:183,29,0	1/1:6,4:14:20.02:105,20,0	1/1:5,4:8:2.91:20,3,0	1/1:11,3:12:11.81:80,12,0	1/1:5,11:17:26.73:185,27,0	1/1:11,11:22:35.11:243,35,0	1/1:7,9:16:1.89:139,2,0	1/1:6,17:24:18.15:226,18,0	1/1:4,3:5:8.91:62,9,0
chr10	27100079	.	G	GGTGTGTGT	6330.66	PASS	AB=1.000;AC=46;AF=0.885;AN=52;BaseQRankSum=-1.619;DP=545;FS=4.456;HRun=0;HaplotypeScore=191.4273;InbreedingCoeff=0.3388;MQ=60.62;MQ0=3;MQRankSum=-1.106;QD=13.22;ReadPosRankSum=-0.425;VQSLOD=3.9010;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:23:28.97:142,0,29	./.	./.	0/1:19,0:14:0:0,0,0	1/1:19,0:24:2.47:103,2,0	1/1:30,0:30:5.84:116,6,0	1/1:21,1:22:7.56:150,8,0	1/1:24,0:24:38.24:761,38,0	1/1:14,0:14:11.96:248,12,0	1/1:30,0:28:42.61:1045,43,0	1/1:13,3:23:6.02:226,6,0	1/1:21,0:20:12.02:261,12,0	1/1:14,0:14:9.03:211,9,0	1/1:13,0:13:0.47:1,0,0	0/0:23,0:25:27.04:0,27,598	1/1:8,0:10:3.01:104,3,0	1/1:16,0:15:9.03:228,9,0	0/0:9,0:9:3:0,3,44	1/1:11,0:11:9.50:191,9,0	1/1:21,0:25:3.32:105,3,0	1/1:15,0:15:3.01:48,3,0	1/1:18,0:18:3.01:89,3,0	1/1:10,0:24:7.33:56,7,0	1/1:8,0:14:6:54,6,0	1/1:18,0:21:6.02:208,6,0	1/1:21,0:20:36.12:999,36,0	1/1:21,1:25:19:578,19,0	1/1:15,1:18:14.79:404,15,0
chr10	27100784	.	A	AC	28259.52	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-13.032;DP=743;FS=0.401;HRun=0;HaplotypeScore=70.2981;InbreedingCoeff=0.9934;MQ=97.05;MQ0=0;MQRankSum=-11.273;QD=43.75;ReadPosRankSum=4.837;VQSLOD=5.1582;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,32:33:93.32:1485,93,0	1/1:0,13:13:33.11:527,33,0	0/0:36,0:36:99:0,105,1369	0/0:36,0:36:99:0,102,1329	1/1:0,24:24:63.21:993,63,0	1/1:0,21:21:60.20:958,60,0	1/1:0,20:20:51.17:815,51,0	1/1:2,43:45:99:2004,129,0	1/1:1,22:23:63.21:994,63,0	1/1:0,35:35:99:1631,105,0	1/1:1,23:24:69.23:1102,69,0	1/1:1,29:30:84.29:1329,84,0	1/1:1,36:37:99:1579,99,0	1/1:0,32:32:90.31:1438,90,0	0/0:25,0:25:75.24:0,75,1033	1/1:0,34:34:78.27:1246,78,0	1/1:0,11:11:30.10:479,30,0	1/1:2,7:9:24.08:368,24,0	1/1:0,17:17:51.17:815,51,0	1/1:0,42:42:99:1886,120,0	1/1:1,36:37:99:1582,99,0	1/1:1,22:23:66.05:992,66,0	1/1:0,35:35:95.98:1528,96,0	1/1:0,29:29:81.28:1294,81,0	1/1:0,21:21:57.19:911,57,0	1/1:0,31:31:93.29:1442,93,0	1/1:1,14:15:39.13:622,39,0	1/1:0,5:5:15.05:240,15,0
chr10	27102253	.	C	CA	14510.95	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-7.811;DP=480;FS=14.834;HRun=6;HaplotypeScore=40.5161;InbreedingCoeff=0.9910;MQ=76.11;MQ0=0;MQRankSum=-4.175;QD=32.61;ReadPosRankSum=2.556;VQSLOD=3.4681;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,12:12:33.11:415,33,0	1/1:1,11:12:27.09:340,27,0	0/0:13,0:13:30.03:0,30,291	0/0:9,0:9:21.03:0,21,210	1/1:3,31:34:90.25:1114,90,0	1/1:0,14:14:42.13:528,42,0	1/1:2,13:15:33.11:415,33,0	1/1:4,28:32:83.83:1043,84,0	1/1:2,10:12:27.09:340,27,0	1/1:1,25:27:78.25:979,78,0	1/1:1,21:22:60.19:755,60,0	1/1:3,12:15:30.10:377,30,0	1/1:1,18:19:51.13:625,51,0	1/1:0,14:14:39.12:491,39,0	0/0:13,0:13:36.08:0,36,367	1/1:1,10:11:21.07:264,21,0	1/1:1,13:14:30.10:377,30,0	1/1:1,16:17:44.95:566,45,0	1/1:2,23:24:69.21:856,69,0	1/1:3,28:31:84.24:1040,84,0	1/1:0,12:12:36.12:453,36,0	1/1:2,10:12:30.10:377,30,0	1/1:1,15:16:42.13:528,42,0	1/1:0,6:6:18.06:226,18,0	1/1:2,9:11:24.08:302,24,0	1/1:1,24:25:72.21:892,72,0	1/1:5,23:28:72.23:905,72,0	1/1:0,8:8:24.08:302,24,0
chr10	27103088	.	G	GA	2789.06	PASS	AC=34;AF=0.850;AN=40;BaseQRankSum=1.809;DP=147;FS=0.000;HRun=2;HaplotypeScore=22.3442;InbreedingCoeff=0.6513;MQ=27.41;MQ0=20;MQRankSum=-1.325;QD=28.17;ReadPosRankSum=-0.554;VQSLOD=2.7834;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,4:5:12:149,12,0	./.	./.	./.	1/1:1,9:10:21.07:301,21,0	1/1:1,9:9:21.07:302,21,0	1/1:0,3:3:9.03:129,9,0	0/0:17,0:16:39.10:0,39,466	1/1:0,5:5:6.02:86,6,0	1/1:2,3:3:9.03:129,9,0	1/1:1,6:7:15.05:215,15,0	./.	1/1:0,4:4:6.02:86,6,0	1/1:0,2:2:5.98:63,6,0	0/0:4,0:4:6.02:0,6,74	1/1:1,5:6:12.04:172,12,0	0/0:7,0:5:12.04:0,12,148	./.	1/1:0,6:6:18.06:259,18,0	1/1:1,8:9:18.06:257,18,0	./.	1/1:1,0:1:3.01:43,3,0	1/1:2,1:3:6.02:80,6,0	./.	1/1:0,2:2:3.01:43,3,0	1/1:4,7:9:27:342,27,0	1/1:2,8:9:21.01:260,21,0	./.
chr10	27103116	.	TA	T	276.03	PASS	AB=0.844;AC=5;AF=0.109;AN=46;BaseQRankSum=-3.245;DP=223;FS=2.276;HRun=10;HaplotypeScore=49.1863;InbreedingCoeff=0.1940;MQ=63.26;MQ0=21;MQRankSum=-3.252;QD=5.63;ReadPosRankSum=1.060;VQSLOD=0.6747;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:3,0:3:8.98:0,9,86	0/0:3,0:3:3.01:0,3,30	0/0:24,1:5:3.85:0,4,22	0/0:27,0:11:7.17:0,7,38	0/1:14,2:16:10.04:10,0,337	0/0:10,0:9:18.01:0,18,185	./.	1/1:3,11:13:29.98:260,30,0	0/0:6,0:6:9.02:0,9,99	0/0:10,0:10:21.06:0,21,232	0/0:12,0:12:30.08:0,30,328	0/0:7,0:7:12.03:0,12,133	0/0:6,0:6:12.03:0,12,133	0/0:1,0:1:3.01:0,3,33	0/0:4,0:4:9.02:0,9,100	0/0:6,0:6:9.02:0,9,100	0/1:4,5:8:12.89:112,0,13	./.	0/0:9,0:8:21.04:0,21,217	0/1:10,0:10:1.53:2,0,148	./.	0/0:3,0:3:9.02:0,9,100	0/0:2,0:2:3.01:0,3,33	./.	0/0:6,0:6:14.87:0,15,147	0/0:13,0:13:39.11:0,39,431	0/0:13,0:12:27.07:0,27,295	./.
chr10	27103131	.	CA	C	2326.55	PASS	AB=0.806;AC=40;AF=0.870;AN=46;BaseQRankSum=-3.695;DP=272;FS=16.369;HRun=12;HaplotypeScore=55.3723;InbreedingCoeff=0.2666;MQ=70.85;MQ0=20;MQRankSum=-2.478;QD=8.91;ReadPosRankSum=1.265;VQSLOD=0.8219;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,6:6:14.94:114,15,0	1/1:1,3:4:2.98:23,3,0	0/1:46,0:11:1.51:2,0,105	0/1:38,0:16:33.30:33,0,39	1/1:5,12:17:30.30:245,30,0	0/1:3,6:9:1.71:96,0,2	./.	1/1:4,0:18:26.48:78,26,0	1/1:0,5:5:8.97:69,9,0	1/1:4,7:11:14.16:192,14,0	1/1:6,6:12:8.15:138,8,0	1/1:2,4:6:11.95:92,12,0	1/1:3,3:6:11.93:89,12,0	1/1:1,0:1:2.99:23,3,0	0/0:5,0:6:14.86:0,15,136	1/1:1,6:7:17.93:138,18,0	0/1:4,0:10:7.81:31,0,8	./.	1/1:3,5:9:16.96:121,17,0	1/1:4,8:12:25.34:172,25,0	./.	1/1:0,4:4:11.95:92,12,0	1/1:0,2:2:5.98:46,6,0	./.	1/1:4,5:9:19.86:134,20,0	1/1:4,11:15:44.80:341,45,0	1/1:2,9:11:23.87:182,24,0	./.
chr10	27103145	.	CA	C	2037.49	PASS	AB=0.829;AC=37;AF=0.740;AN=50;BaseQRankSum=-1.177;DP=306;FS=39.057;HRun=12;HaplotypeScore=61.9330;InbreedingCoeff=0.3560;MQ=78.60;MQ0=9;MQRankSum=0.424;QD=9.35;ReadPosRankSum=4.213;VQSLOD=-0.0222;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,4:8:19.93:142,20,0	1/1:3,1:4:5.98:46,6,0	0/1:48,0:17:2.96:3,0,63	0/0:43,0:22:0.57:0,1,66	1/1:7,7:14:20.90:162,21,0	1/1:5,4:9:20.91:160,21,0	0/1:3,0:2:13.60:17,0,14	0/0:25,0:25:50.99:0,51,481	1/1:4,3:7:8.97:69,9,0	1/1:10,6:16:29.85:230,30,0	1/1:5,6:11:20.84:154,21,0	0/1:4,2:6:11.76:57,0,12	1/1:4,2:6:8.94:69,9,0	1/1:2,0:2:2.98:23,3,0	0/0:5,0:5:15.01:0,15,141	1/1:3,5:8:17.91:137,18,0	0/0:13,0:14:29.86:0,30,260	1/1:1,0:1:2.99:23,3,0	0/1:8,3:11:18.93:154,0,19	1/1:8,6:13:26.85:205,27,0	./.	1/1:0,4:4:11.95:92,12,0	1/1:0,4:4:5.98:46,6,0	./.	1/1:9,2:10:14.41:101,14,0	1/1:11,6:18:5.93:188,6,0	0/1:5,7:12:9.48:118,0,9	./.
chr10	27104841	.	A	AG	63.86	PASS	AB=0.876;AC=7;AF=0.125;AN=56;BaseQRankSum=6.836;DP=506;FS=0.000;HRun=0;HaplotypeScore=77.6306;InbreedingCoeff=-0.1424;MQ=49.43;MQ0=9;MQRankSum=-7.086;QD=0.58;ReadPosRankSum=-5.924;VQSLOD=0.0885;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:21,1:17:45.10:0,45,591	0/1:6,1:7:20.39:20,0,152	0/0:17,0:9:24.06:0,24,317	0/0:12,0:5:11.77:0,12,156	0/0:11,5:16:25.70:0,26,413	0/0:14,0:12:19.91:0,20,428	0/0:25,1:24:66.14:0,66,878	0/0:28,0:28:84.21:0,84,1118	0/0:17,2:18:42.07:0,42,561	0/1:12,6:14:99:113,0,319	0/0:22,1:18:42.50:0,42,596	0/0:16,1:15:10.17:0,10,534	0/0:26,0:23:66.18:0,66,894	0/0:17,2:16:4.02:0,4,437	0/0:20,0:20:60.19:0,60,823	0/0:10,2:11:24.05:0,24,314	0/0:24,0:23:53.90:0,54,723	0/0:18,1:18:7.12:0,7,538	0/1:25,3:24:8.51:9,0,741	0/0:22,1:22:24.98:0,25,638	0/1:10,1:11:10.92:11,0,231	0/0:10,2:10:24.01:0,24,319	0/0:11,1:10:21.07:0,21,293	0/0:18,0:13:36.03:0,36,458	0/0:14,1:14:7.38:0,7,454	0/1:12,1:12:19.69:20,0,267	0/1:25,3:27:4.80:5,0,805	0/1:5,1:5:2.91:3,0,152
chr10	27104905	.	GA	G	232.69	PASS	AB=0.852;AC=9;AF=0.161;AN=56;BaseQRankSum=5.144;DP=480;FS=5.452;HRun=3;HaplotypeScore=112.2941;InbreedingCoeff=-0.1969;MQ=45.07;MQ0=8;MQRankSum=-7.063;QD=1.60;ReadPosRankSum=-0.368;VQSLOD=-0.7491;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:29:78.73:0,79,554	0/0:6,0:6:14.91:0,15,113	0/1:2,1:2:30.23:30,0,36	0/0:4,0:3:6.02:0,6,86	0/0:36,1:36:89.15:0,89,684	0/1:16,4:18:20.49:20,0,248	0/0:24,0:21:45.81:0,46,328	0/1:11,3:14:32.61:96,0,33	0/0:15,2:16:1.98:0,2,203	0/0:22,3:21:22.49:0,22,311	0/1:18,4:16:32.34:32,0,127	0/0:10,2:10:26.50:0,27,179	0/0:19,3:19:20:0,20,336	0/0:16,2:16:35.37:0,35,232	0/0:20,0:20:57.19:0,57,815	0/1:15,0:14:0.52:1,0,151	0/1:16,2:17:73.91:122,0,74	0/0:16,1:15:3.45:0,3,194	0/0:19,3:16:32.60:0,33,234	0/0:16,3:18:38.46:0,38,268	0/0:11,0:11:29.60:0,30,213	0/1:8,2:9:5.32:5,0,122	0/0:8,1:8:14.78:0,15,95	0/0:14,2:11:11.85:0,12,150	0/0:15,1:15:8.86:0,9,235	0/1:16,4:19:48.15:48,0,191	0/1:19,4:22:4.50:4,0,262	0/0:6,0:5:14.84:0,15,103
chr10	27105125	.	CAT	C	10395.31	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=5.816;DP=333;FS=79.447;HRun=0;HaplotypeScore=44.7734;InbreedingCoeff=0.8300;MQ=87.49;MQ0=2;MQRankSum=-5.757;QD=37.13;ReadPosRankSum=2.601;VQSLOD=1.5404;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,19:21:54.18:794,54,0	1/1:0,1:1:3.01:44,3,0	0/0:15,0:15:39.12:0,39,675	0/0:11,0:11:30.07:0,30,527	1/1:0,7:7:12.04:176,12,0	1/1:1,6:7:18.06:265,18,0	1/1:1,5:6:12.04:177,12,0	1/1:4,32:36:93.22:1249,93,0	1/1:1,7:7:18.06:264,18,0	1/1:0,8:8:24.04:329,24,0	1/1:0,13:13:33.11:485,33,0	1/1:1,5:5:15.05:220,15,0	1/1:0,17:17:45.15:661,45,0	1/1:1,13:14:39.13:573,39,0	0/0:27,0:27:81.26:0,81,1484	1/1:0,10:10:27.09:397,27,0	1/1:1,9:10:21.07:309,21,0	1/1:0,17:17:48.08:677,48,0	1/1:0,18:18:54.15:754,54,0	1/1:0,9:9:21.06:290,21,0	1/1:0,19:19:48.16:706,48,0	1/1:0,1:1:3.01:44,3,0	1/1:0,6:6:15.05:221,15,0	1/1:0,7:7:15.05:220,15,0	1/1:1,4:5:12.04:176,12,0	1/1:0,14:14:42.14:617,42,0	1/1:0,15:15:39.13:572,39,0	1/1:0,5:4:12.04:176,12,0
chr10	27108962	.	T	TA	6744.99	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-14.680;DP=593;FS=2.903;HRun=7;HaplotypeScore=53.6028;InbreedingCoeff=0.9888;MQ=77.75;MQ0=0;MQRankSum=-2.218;QD=29.71;ReadPosRankSum=0.539;VQSLOD=5.2912;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:60.03:0,60,558	1/1:1,10:11:27.08:326,27,0	0/0:14,0:14:15.06:0,15,209	0/0:16,0:16:32.91:0,33,291	0/0:41,0:42:99:0,119,1135	1/1:2,23:25:60.18:725,60,0	1/1:2,13:15:30.09:362,30,0	1/1:5,27:32:81.16:927,81,0	0/0:14,0:14:33.05:0,33,319	0/0:25,0:24:66.10:0,66,637	0/0:21,0:21:51.07:0,51,488	1/1:3,21:24:51.16:614,51,0	1/1:2,32:34:96.29:1160,96,0	1/1:3,17:20:48.13:566,48,0	0/0:29,0:29:84.14:0,84,811	0/0:25,0:25:75.09:0,75,710	1/1:2,13:15:39.12:471,39,0	0/0:10,0:10:27.04:0,27,260	0/0:19,0:19:57.08:0,57,542	0/0:42,0:42:99:0,111,1066	0/0:14,0:14:39.06:0,39,377	1/1:3,21:24:66.20:796,66,0	1/1:2,21:23:57.17:688,57,0	1/1:0,4:4:9.03:109,9,0	0/0:27,0:27:75.12:0,75,724	0/0:20,0:20:60.09:0,60,576	0/0:18,0:18:48.08:0,48,463	0/0:9,0:9:27.04:0,27,261
chr10	27110075	.	AG	A	2378.19	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=3.265;DP=694;FS=2.796;HRun=2;HaplotypeScore=81.5915;InbreedingCoeff=0.9981;MQ=85.31;MQ0=0;MQRankSum=-0.113;QD=32.14;ReadPosRankSum=-2.545;VQSLOD=2.7372;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,126,1845	1/1:0,10:10:27.03:330,27,0	0/0:20,0:20:56.98:0,57,739	0/0:25,1:26:47.87:0,48,870	0/0:34,0:34:99:0,102,1506	0/0:26,0:26:75.24:0,75,1099	0/0:25,0:25:75.21:0,75,1061	1/1:2,38:40:99:1373,111,0	0/0:21,0:21:63.19:0,63,905	0/0:30,0:30:90.29:0,90,1313	0/0:17,0:17:48.16:0,48,718	0/0:22,0:22:66.19:0,66,947	0/0:24,0:24:72.24:0,72,1071	0/0:31,0:31:93.31:0,93,1372	0/0:21,0:21:59.40:0,59,841	0/0:29,0:29:84.27:0,84,1237	1/1:1,23:24:63.20:817,63,0	0/0:8,0:8:21.07:0,21,313	0/0:27,0:27:75.22:0,75,1080	0/0:29,0:29:87.26:0,87,1243	0/0:27,0:27:81.27:0,81,1213	0/0:28,0:28:81.27:0,81,1206	0/0:20,0:20:57.18:0,57,830	0/0:26,0:26:75.24:0,75,1102	0/0:25,0:25:75.23:0,75,1084	0/0:24,0:24:72.24:0,72,1060	0/0:25,0:25:75.22:0,75,1079	0/0:12,0:12:36.01:0,36,408
chr10	27110591	.	A	ATTTAAG	15560.76	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-10.867;DP=502;FS=2.355;HRun=0;HaplotypeScore=95.5603;InbreedingCoeff=0.9894;MQ=84.29;MQ0=0;MQRankSum=-15.752;QD=89.95;ReadPosRankSum=0.523;VQSLOD=6.3130;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:51.17:0,51,1218	1/1:0,6:6:18.06:673,18,0	0/0:20,0:20:47.18:0,47,984	0/0:16,0:16:42.02:0,42,921	0/0:29,0:29:84.26:0,84,2016	1/1:0,15:18:42.14:1570,42,0	1/1:0,8:9:18.06:628,18,0	1/1:0,24:35:99:3322,105,0	0/0:28,0:28:84.25:0,84,1984	0/0:22,0:22:63.21:0,63,1559	0/0:25,0:25:75.26:0,75,1879	1/1:0,23:24:66.23:2471,66,0	1/1:0,25:27:60.21:2240,60,0	1/1:0,20:21:51.18:1905,51,0	0/0:23,0:23:66.23:0,66,1664	0/0:20,0:20:60.14:0,60,1429	1/1:0,7:10:24.08:886,24,0	0/0:10,0:10:30.03:0,30,656	0/0:23,0:23:66.20:0,66,1636	0/0:18,0:18:51.18:0,51,1306	0/0:6,0:6:18.06:0,18,403	1/1:1,7:8:21.07:786,21,0	1/1:0,8:10:17.96:674,18,0	1/1:1,4:5:12.04:406,12,0	0/0:18,0:18:51.16:0,51,1255	0/0:23,0:23:69.19:0,69,1680	0/0:24,0:23:71.21:0,71,1558	0/0:7,0:7:21.07:0,21,538
chr10	27114442	.	T	TC	3602.05	PASS	AB=1.000;AC=47;AF=0.870;AN=54;BaseQRankSum=7.211;DP=332;FS=177.156;HRun=0;HaplotypeScore=285.0236;InbreedingCoeff=0.6307;MQ=63.08;MQ0=33;MQRankSum=-7.505;QD=15.66;ReadPosRankSum=3.304;VQSLOD=-0.5584;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:4:6.47:52,6,0	1/1:3,0:3:6.01:71,6,0	0/0:31,0:8:24.07:0,24,319	0/0:35,0:21:57.15:0,57,757	1/1:17,0:15:14.38:138,14,0	1/1:14,0:14:23.58:243,24,0	0/1:7,0:7:0.59:120,0,1	1/1:7,0:7:9.47:77,9,0	1/1:9,1:10:17.55:162,18,0	1/1:8,0:8:7.17:181,7,0	1/1:14,0:14:4.54:131,5,0	1/1:12,1:13:20.22:249,20,0	1/1:15,0:14:30.17:287,30,0	1/1:6,0:6:10.44:73,10,0	0/0:35,0:34:99:0,102,1397	1/1:11,1:12:27.07:244,27,0	1/1:3,0:3:5.90:37,6,0	1/1:5,0:4:5.61:46,6,0	1/1:8,0:7:15.68:171,16,0	1/1:11,0:11:14.87:133,15,0	1/1:8,0:7:12:138,12,0	1/1:5,1:5:9.91:102,10,0	1/1:10,0:9:17.52:184,18,0	1/1:4,0:3:2.68:11,3,0	1/1:14,0:10:7.87:172,8,0	1/1:11,0:11:31.28:270,31,0	1/1:20,0:18:36.11:310,36,0	./.
chr10	27114946	.	GGTGTGT	G	1749.28	PASS	AB=0.726;AC=12;AF=0.240;AN=50;BaseQRankSum=2.591;DP=599;FS=0.685;HRun=0;HaplotypeScore=137.7073;InbreedingCoeff=0.5360;MQ=69.70;MQ0=8;MQRankSum=-6.372;QD=10.11;ReadPosRankSum=0.387;VQSLOD=2.8403;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:21:6.02:0,6,175	0/0:7,0:7:9.01:0,9,206	./.	./.	0/0:18,0:31:3.95:0,4,228	0/1:18,6:26:23.01:361,0,23	1/1:11,7:19:12.92:202,13,0	0/0:25,0:25:17.89:0,18,144	0/0:7,0:13:8.37:0,8,252	0/0:22,0:34:54.04:0,54,1018	0/0:16,0:17:14.06:0,14,258	0/1:15,7:23:5.88:203,0,6	1/1:5,15:20:15.05:305,15,0	0/1:10,8:19:6.53:340,0,7	0/0:23,0:24:27.04:0,27,568	0/0:13,0:19:12.02:0,12,252	0/0:18,0:21:11.89:0,12,273	0/0:12,0:18:14.92:0,15,257	0/0:12,0:11:21.04:0,21,443	0/0:14,0:13:12.03:0,12,248	0/0:16,0:16:12.04:0,12,292	0/1:11,7:18:2.95:113,0,3	1/1:15,12:26:12.04:229,12,0	1/1:13,8:21:9.17:156,9,0	0/0:33,0:38:45.05:0,45,871	0/0:23,0:28:36.11:0,36,815	0/0:23,0:31:21.02:0,21,414	./.
chr10	27114957	.	G	GTGTG	2259.35	PASS	AB=1.000;AC=30;AF=0.600;AN=50;BaseQRankSum=-6.145;DP=597;FS=4.692;HRun=0;HaplotypeScore=121.1546;InbreedingCoeff=0.2760;MQ=59.95;MQ0=12;MQRankSum=4.659;QD=5.68;ReadPosRankSum=-0.723;VQSLOD=2.2951;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:21,0:21:40.66:65,0,41	1/1:7,0:7:8.97:71,9,0	./.	./.	1/1:26,0:26:8.68:153,9,0	0/0:32,0:32:19.98:0,20,192	0/0:24,0:24:7.35:0,7,54	1/1:26,0:25:4.76:23,5,0	0/1:15,0:14:10.85:131,0,11	0/1:30,0:30:10.60:309,0,11	1/1:9,4:14:8.75:93,9,0	0/1:24,0:24:5.05:5,0,84	0/0:21,0:20:14.88:0,15,139	0/0:19,0:19:18.02:0,18,165	0/1:19,0:19:3.89:4,0,234	1/1:20,0:20:5.75:74,6,0	1/1:22,0:22:11.83:165,12,0	1/1:18,0:18:9.19:103,9,0	0/1:14,0:13:9.92:10,0,158	0/1:13,0:12:16.02:16,0,54	1/1:16,0:16:7.31:89,7,0	0/0:19,0:19:6.01:0,6,56	0/0:32,0:31:6.92:0,7,54	0/1:25,0:25:9.07:9,0,72	1/1:31,0:31:26.48:421,26,0	1/1:28,0:26:26.38:354,26,0	1/1:29,0:29:15.05:336,15,0	./.
chr10	27115683	.	TTC	T	10383.92	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-5.596;DP=486;FS=0.000;HRun=0;HaplotypeScore=80.0626;InbreedingCoeff=0.9504;MQ=65.21;MQ0=3;MQRankSum=2.391;QD=29.67;ReadPosRankSum=3.330;VQSLOD=5.9704;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,20:23:15.68:603,16,0	1/1:1,10:11:27.09:359,27,0	0/0:17,0:16:35.28:0,35,603	0/0:11,0:9:21.06:0,21,338	1/1:3,38:41:99:1303,102,0	0/0:19,0:19:40.19:0,40,184	0/0:7,0:7:7.98:0,8,37	1/1:5,24:29:71.76:851,72,0	1/1:0,14:14:30.10:399,30,0	1/1:2,20:22:60.09:716,60,0	1/1:2,28:30:69.23:918,69,0	0/0:12,0:12:19.02:0,19,87	0/0:11,0:11:24.34:0,24,134	0/0:17,0:17:34.74:0,35,170	0/0:16,0:16:45.14:0,45,745	1/1:1,9:10:27.06:342,27,0	1/1:5,9:13:21.07:279,21,0	1/1:9,11:19:10.87:447,11,0	1/1:2,16:18:45.10:541,45,0	1/1:1,29:30:69.23:917,69,0	1/1:0,10:10:21.07:280,21,0	0/0:4,0:4:7.79:0,8,31	0/0:19,0:19:38.71:0,39,206	0/0:3,0:3:5.19:0,5,21	1/1:0,22:20:51.17:679,51,0	1/1:1,17:18:48.11:592,48,0	1/1:0,21:21:48.16:638,48,0	1/1:3,14:17:39.13:519,39,0
chr10	27115691	.	CTGTG	C	2953.04	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=-6.368;DP=484;FS=1.063;HRun=0;HaplotypeScore=123.2284;InbreedingCoeff=0.8917;MQ=63.14;MQ0=3;MQRankSum=-3.006;QD=29.83;ReadPosRankSum=1.401;VQSLOD=3.2444;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:57.16:0,57,718	0/0:10,0:10:27.08:0,27,302	0/0:21,0:18:44.49:0,44,948	0/0:10,0:8:21.07:0,21,455	0/0:43,0:43:55.10:0,55,1285	1/1:3,16:19:42.14:730,42,0	1/1:2,4:6:12.04:209,12,0	0/0:26,0:26:57.18:0,57,725	0/0:15,0:15:33.10:0,33,405	0/0:20,0:20:45.14:0,45,558	0/0:30,0:30:75.22:0,75,883	1/1:1,9:10:24.08:401,24,0	1/1:3,9:12:18.06:313,18,0	1/1:4,12:16:30.10:522,30,0	0/0:18,0:18:51.17:0,51,1212	0/1:10,0:10:7.66:8,0,249	0/0:13,0:12:30.08:0,30,352	0/0:20,0:19:43:0,43,516	0/0:18,0:18:39.12:0,39,525	0/0:31,0:31:75.20:0,75,896	0/0:11,0:11:24.07:0,24,284	1/1:0,3:3:9.03:156,9,0	1/1:5,14:19:41.95:711,42,0	1/1:0,4:4:6.02:104,6,0	0/0:22,0:20:51.15:0,51,592	0/0:18,0:18:45.14:0,45,581	0/0:21,0:21:48.12:0,48,529	0/0:14,0:14:39.10:0,39,424
chr10	27118658	.	T	TATA	1642.01	PASS	AC=12;AF=0.240;AN=50;BaseQRankSum=-1.816;DP=238;FS=3.855;HRun=0;HaplotypeScore=42.7093;InbreedingCoeff=0.8260;MQ=62.36;MQ0=2;MQRankSum=0.318;QD=46.91;ReadPosRankSum=0.021;VQSLOD=4.6990;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:3,0:3:6.02:0,6,98	0/0:4,0:4:9.03:0,9,147	./.	0/0:6,0:2:0:0,0,0	0/0:9,0:9:27.08:0,27,417	1/1:1,9:9:24.08:536,24,0	1/1:1,3:4:9.03:199,9,0	0/0:33,0:33:87.28:0,87,1374	0/0:2,0:2:6.02:0,6,98	0/0:13,0:13:33.11:0,33,539	0/0:10,0:10:24.07:0,24,368	1/1:0,6:6:15.05:334,15,0	1/1:2,4:6:6.02:134,6,0	1/1:0,8:8:24.08:534,24,0	0/0:10,0:10:21.07:0,21,343	0/0:9,0:9:21.05:0,21,318	0/0:9,0:9:27.09:0,27,432	0/0:16,0:16:42.10:0,42,655	0/0:16,0:16:45.15:0,45,735	0/0:5,0:5:12.04:0,12,196	0/0:4,0:4:12.04:0,12,196	1/1:1,0:1:3.01:67,3,0	./.	./.	0/0:12,0:12:33.11:0,33,539	0/0:9,0:9:27.08:0,27,417	0/0:15,0:15:39.13:0,39,637	0/0:16,0:16:48.16:0,48,784
chr10	27118698	.	GT	G	5492.57	PASS	AC=28;AF=0.538;AN=52;BaseQRankSum=-0.525;DP=274;FS=5.267;HRun=4;HaplotypeScore=38.3843;InbreedingCoeff=0.9109;MQ=62.78;MQ0=0;MQRankSum=1.284;QD=34.12;ReadPosRankSum=1.627;VQSLOD=5.0621;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,5:5:15.05:180,15,0	0/0:4,0:4:12.04:0,12,168	0/0:3,0:3:9.03:0,9,118	0/0:2,0:2:2.99:0,3,42	1/1:1,10:11:30.09:360,30,0	0/0:16,0:16:45.14:0,45,613	0/0:7,0:7:18.06:0,18,252	0/0:27,0:27:78.25:0,78,1078	1/1:0,2:2:6.02:72,6,0	1/1:0,18:18:54.14:634,54,0	1/1:0,18:18:54.17:648,54,0	0/0:8,0:8:24.08:0,24,336	0/0:12,0:12:33.08:0,33,441	0/0:9,0:9:27.09:0,27,377	0/0:13,0:13:39.13:0,39,546	1/1:1,12:13:36.11:432,36,0	0/0:11,0:11:33.11:0,33,462	1/1:1,16:17:45.14:540,45,0	1/1:1,10:11:30.09:360,30,0	1/1:0,6:6:18.06:216,18,0	1/1:0,5:5:15.05:180,15,0	0/0:1,0:1:3.01:0,3,42	./.	./.	1/1:0,18:18:51.16:612,51,0	1/1:0,10:10:30.09:359,30,0	1/1:2,18:20:54.17:648,54,0	1/1:0,7:7:21.06:252,21,0
chr10	27119661	.	AT	A	5354.30	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=16.829;DP=599;FS=0.000;HRun=2;HaplotypeScore=68.3039;InbreedingCoeff=0.9997;MQ=82.78;MQ0=0;MQRankSum=-0.773;QD=34.54;ReadPosRankSum=2.719;VQSLOD=5.1415;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:45.15:0,45,673	0/0:9,0:9:27.09:0,27,404	0/0:21,0:22:58.11:0,58,902	0/0:13,0:13:33.11:0,33,485	0/0:29,0:29:84.27:0,84,1239	1/1:1,25:26:72.23:893,72,0	1/1:0,14:14:36.11:446,36,0	0/0:38,0:38:99:0,105,1556	0/0:16,0:16:48.15:0,48,699	0/0:39,0:39:99:0,114,1704	0/0:31,0:31:90.30:0,90,1349	1/1:0,18:18:54.17:669,54,0	1/1:0,22:22:57.18:707,57,0	1/1:0,21:21:60.19:744,60,0	0/0:26,0:26:78.26:0,78,1168	0/0:17,0:17:48.15:0,48,701	0/0:14,0:14:42.11:0,42,605	0/0:19,0:19:54.18:0,54,809	0/0:15,0:15:45.15:0,45,675	0/0:28,0:28:81.27:0,81,1208	0/0:14,0:14:42.14:0,42,619	1/1:1,17:18:51.16:631,51,0	1/1:0,25:25:72.23:892,72,0	1/1:0,11:11:30.09:372,30,0	0/0:25,0:25:75.23:0,75,1102	0/0:21,0:21:63.21:0,63,922	0/0:34,0:34:99:0,99,1481	0/0:18,0:18:51.17:0,51,764
chr10	27121123	.	A	AT	5170.80	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-14.097;DP=515;FS=3.266;HRun=5;HaplotypeScore=46.5102;InbreedingCoeff=0.9945;MQ=80.44;MQ0=0;MQRankSum=-1.865;QD=36.67;ReadPosRankSum=1.682;VQSLOD=4.3809;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:36.09:0,36,387	0/0:10,0:10:30.08:0,30,322	0/0:13,0:13:33.05:0,33,328	0/0:14,0:14:38.78:0,39,371	0/0:31,0:31:87.20:0,87,926	1/1:0,22:22:63.20:829,63,0	1/1:0,10:10:30.10:395,30,0	0/0:29,0:29:72.16:0,72,762	0/0:12,0:12:36.09:0,36,387	0/0:20,0:20:60.13:0,60,636	0/0:26,0:26:72.18:0,72,774	1/1:0,10:10:30.10:395,30,0	1/1:4,27:31:75.24:987,75,0	1/1:0,25:25:69.22:908,69,0	0/0:12,0:12:36.09:0,36,387	0/0:18,0:18:51.13:0,51,548	0/0:13,0:13:33.08:0,33,355	0/0:5,0:5:15:0,15,148	0/0:12,0:12:24.06:0,24,258	0/0:39,0:39:99:0,111,1193	0/0:7,0:7:21.05:0,21,226	1/1:0,20:20:57.19:750,57,0	1/1:0,17:17:51.17:671,51,0	1/1:0,6:6:18.06:237,18,0	0/0:23,0:23:66.17:0,66,709	0/0:25,0:25:72.17:0,72,767	0/0:38,0:38:99:0,105,1128	0/0:13,0:13:39.10:0,39,418
chr10	27121269	.	GA	G	4691.97	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=15.868;DP=625;FS=17.060;HRun=8;HaplotypeScore=69.7191;InbreedingCoeff=0.9963;MQ=79.86;MQ0=0;MQRankSum=-0.638;QD=25.64;ReadPosRankSum=1.839;VQSLOD=3.8063;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:36.01:0,36,390	0/0:18,0:18:54.17:0,54,652	0/0:18,0:18:40.13:0,40,488	0/0:15,0:15:19.40:0,19,192	0/0:25,0:25:60.18:0,60,724	1/1:1,34:35:99:956,99,0	1/1:0,15:15:39.06:377,39,0	0/0:35,0:35:81.23:0,81,957	0/0:19,0:19:45.14:0,45,543	0/0:19,0:19:54.17:0,54,652	0/0:28,1:29:52.26:0,52,899	1/1:1,22:23:63.10:608,63,0	1/1:2,27:29:75.12:724,75,0	1/1:3,23:26:63.10:608,63,0	0/0:17,0:17:16.36:0,16,478	0/0:22,0:22:60.17:0,60,713	0/0:24,0:24:66.18:0,66,774	0/0:10,0:10:24.07:0,24,289	0/0:20,1:21:25.15:0,25,571	0/0:32,0:32:87.26:0,87,1041	0/0:24,0:24:72.19:0,72,845	1/1:1,16:17:48.08:464,48,0	1/1:2,17:19:51.08:492,51,0	1/1:1,18:19:48.07:464,48,0	0/0:20,0:20:57.17:0,57,688	0/0:31,0:31:87.27:0,87,1051	0/0:39,0:39:99:0,108,1301	0/0:10,0:10:30.09:0,30,362
chr10	27124129	.	AT	A	4185.11	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-0.307;DP=465;FS=7.015;HRun=5;HaplotypeScore=85.8578;InbreedingCoeff=0.9792;MQ=68.55;MQ0=0;MQRankSum=0.238;QD=30.11;ReadPosRankSum=2.073;VQSLOD=4.1865;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:30.07:0,30,377	0/0:12,0:12:36.12:0,36,492	0/0:7,0:7:12.04:0,12,160	0/0:6,0:5:8.97:0,9,110	0/0:27,0:27:78.26:0,78,1066	1/1:1,17:18:48.14:545,48,0	1/1:0,8:8:24.07:272,24,0	0/0:34,0:34:87.28:0,87,1177	0/0:13,0:13:33.11:0,33,451	0/0:19,0:19:48.14:0,48,628	0/0:29,0:29:81.26:0,81,1095	1/1:0,15:15:42.12:476,42,0	1/1:1,24:25:69.20:782,69,0	1/1:0,16:16:42.12:476,42,0	1/1:1,16:17:42.12:476,42,0	0/0:10,0:10:27.09:0,27,369	0/0:14,0:14:42.05:0,42,541	0/0:18,0:18:51.17:0,51,697	0/0:18,0:18:47.09:0,47,649	0/0:26,0:26:78.25:0,78,1052	0/0:8,0:8:18.06:0,18,246	1/1:3,10:13:27.07:306,27,0	1/1:0,22:22:63.18:715,63,0	1/1:0,5:5:12.03:136,12,0	0/0:15,0:15:42.14:0,42,573	0/0:23,0:23:66.22:0,66,903	0/0:21,0:20:60.20:0,60,818	0/0:15,0:15:42.14:0,42,574
chr10	27124395	.	GTTT	G	945.42	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.911;DP=504;FS=0.852;HRun=4;HaplotypeScore=68.4857;InbreedingCoeff=0.9965;MQ=85.19;MQ0=0;MQRankSum=-2.887;QD=36.36;ReadPosRankSum=2.187;VQSLOD=1.5003;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:36.12:0,36,849	0/0:9,0:9:27.09:0,27,639	0/0:19,0:19:57.20:0,57,1295	0/0:13,0:13:39.13:0,39,906	0/0:21,0:21:60.21:0,60,1387	0/0:22,0:22:66.23:0,66,1544	0/0:14,0:14:39.13:0,39,906	0/0:27,0:27:78.27:0,78,1746	0/0:19,0:19:57.20:0,57,1345	0/0:25,0:25:75.25:0,75,1645	0/0:18,0:18:51.18:0,51,1206	0/0:14,0:14:42.14:0,42,977	0/0:18,0:18:54.19:0,54,1233	0/0:16,0:16:48.16:0,48,1056	1/1:0,26:26:60.20:1040,60,0	0/0:10,0:10:30.10:0,30,710	0/0:11,0:11:30.10:0,30,686	0/0:14,0:14:42.12:0,42,942	0/0:21,0:21:60.20:0,60,1331	0/0:31,0:31:90.31:0,90,2110	0/0:10,0:10:30.10:0,30,710	0/0:19,0:19:57.20:0,57,1326	0/0:20,0:20:60.20:0,60,1375	0/0:10,0:10:30.10:0,30,710	0/0:13,0:13:36.08:0,36,800	0/0:23,0:23:69.24:0,69,1607	0/0:36,0:36:99:0,105,2466	0/0:13,0:13:39.13:0,39,918
chr10	27124658	.	A	AAAG	31419.19	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-0.874;DP=645;FS=3.581;HRun=0;HaplotypeScore=106.2274;InbreedingCoeff=0.9919;MQ=85.73;MQ0=0;MQRankSum=-8.066;QD=58.08;ReadPosRankSum=5.390;VQSLOD=6.5451;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,34:39:99:2136,102,0	0/0:13,0:13:36.09:0,36,549	0/0:23,0:23:66.05:0,66,1089	0/0:23,0:23:58.04:0,58,888	1/1:3,25:30:75.25:1592,75,0	1/1:1,23:24:63.17:1379,63,0	1/1:3,15:18:51.18:1133,51,0	0/0:26,0:26:78.26:0,78,1260	1/1:0,25:26:69.24:1532,69,0	1/1:3,25:29:84.28:1864,84,0	1/1:1,18:20:57.19:1190,57,0	1/1:2,23:26:69.24:1549,69,0	1/1:0,25:25:69.24:1563,69,0	1/1:1,19:20:51.18:1149,51,0	1/1:4,20:24:60.20:1299,60,0	1/1:1,25:27:72.21:1524,72,0	0/0:19,0:19:54.18:0,54,890	1/1:4,14:18:48.16:1056,48,0	1/1:4,14:19:54.18:1204,54,0	1/1:2,31:34:93.32:1988,93,0	1/1:2,13:15:36.12:786,36,0	1/1:2,23:26:75.13:1493,75,0	1/1:3,21:24:63.14:1319,63,0	1/1:0,8:8:21.07:475,21,0	1/1:4,19:24:60.16:1312,60,0	1/1:1,21:22:63.22:1371,63,0	1/1:1,35:37:99:2233,102,0	1/1:0,6:6:12.04:272,12,0
chr10	27125432	.	CT	C	12987.31	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=13.859;DP=670;FS=0.906;HRun=1;HaplotypeScore=66.3598;InbreedingCoeff=0.9983;MQ=77.39;MQ0=0;MQRankSum=-2.217;QD=38.88;ReadPosRankSum=1.602;VQSLOD=5.4817;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,54:54:99:2013,144,0	0/0:7,0:7:21.07:0,21,336	0/0:16,0:16:45.10:0,45,654	0/0:19,0:19:53.18:0,53,750	1/1:0,22:22:57.19:796,57,0	0/0:36,0:36:99:0,108,1704	0/0:32,0:32:96.31:0,96,1504	0/0:19,0:19:57.19:0,57,910	1/1:0,16:16:42.14:587,42,0	1/1:0,11:11:33.11:461,33,0	1/1:0,27:27:75.25:1047,75,0	0/0:28,0:28:84.26:0,84,1297	0/0:16,0:16:48.16:0,48,767	0/0:29,0:29:84.29:0,84,1343	0/0:23,0:23:69.22:0,69,1077	1/1:0,31:31:87.29:1216,87,0	0/0:34,0:34:99:0,102,1631	1/1:0,27:27:78.26:1090,78,0	1/1:0,17:17:51.17:706,51,0	1/1:0,17:17:48.16:670,48,0	1/1:0,33:33:93.31:1300,93,0	0/0:19,0:19:54.18:0,54,863	0/0:22,0:22:63.20:0,63,984	0/0:36,0:36:99:0,108,1727	1/1:0,16:16:42.14:587,42,0	1/1:0,22:22:66.22:923,66,0	1/1:0,35:35:96.32:1340,96,0	1/1:0,6:6:18.06:252,18,0
chr10	27126077	.	CT	C	10717.23	PASS	AB=0.905;AC=47;AF=0.839;AN=56;BaseQRankSum=5.423;DP=559;FS=9.143;HRun=9;HaplotypeScore=60.4246;InbreedingCoeff=0.8843;MQ=84.65;MQ0=0;MQRankSum=-2.623;QD=22.01;ReadPosRankSum=5.002;VQSLOD=5.2418;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,32:37:90.04:824,90,0	0/0:17,0:17:42.12:0,42,485	0/1:17,2:19:3.56:4,0,411	0/0:16,1:17:23.49:0,23,232	1/1:2,23:26:62.06:555,62,0	1/1:1,24:25:72.04:659,72,0	1/1:4,21:25:53.89:494,54,0	0/0:21,0:21:51.09:0,51,559	1/1:1,19:20:54.03:494,54,0	1/1:1,12:13:35.99:322,36,0	1/1:1,20:22:59.07:527,59,0	1/1:1,18:19:51.03:467,51,0	1/1:3,22:25:54.02:494,54,0	1/1:2,9:11:27.01:247,27,0	1/1:0,14:14:42.02:384,42,0	1/1:2,22:24:63.03:577,63,0	0/0:17,0:17:48.13:0,48,542	1/1:2,13:15:33:302,33,0	1/1:2,16:18:48:431,48,0	1/1:1,16:17:45.02:412,45,0	1/1:2,23:25:60.03:549,60,0	1/1:2,27:29:68.97:622,69,0	1/1:4,18:22:19.40:432,19,0	1/1:2,30:32:87.05:796,87,0	1/1:1,14:15:33.02:302,33,0	1/1:2,14:16:42.01:383,42,0	1/1:2,14:16:42.02:384,42,0	1/1:0,2:2:6:55,6,0
chr10	27126554	.	GA	G	11987.31	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=0.994;DP=593;FS=1.504;HRun=9;HaplotypeScore=60.7093;InbreedingCoeff=0.9886;MQ=72.14;MQ0=0;MQRankSum=-2.713;QD=24.02;ReadPosRankSum=2.690;VQSLOD=5.7403;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,38:38:99:1016,111,0	0/0:12,0:11:33.09:0,33,373	0/0:14,0:14:26.66:0,27,271	0/0:10,0:8:14.99:0,15,147	1/1:4,28:32:75.02:686,75,0	1/1:1,28:29:81.04:741,81,0	1/1:3,22:25:63.03:577,63,0	0/0:24,0:24:57.16:0,57,649	1/1:2,15:17:42.01:384,42,0	1/1:2,19:21:57.03:522,57,0	1/1:3,16:19:44.97:404,45,0	1/1:1,15:16:45.02:412,45,0	1/1:0,17:17:51.03:467,51,0	1/1:0,17:17:51.03:467,51,0	1/1:2,20:22:51.03:467,51,0	1/1:2,16:18:42.02:384,42,0	0/0:34,0:34:90.22:0,90,1011	1/1:2,13:15:30.02:275,30,0	1/1:2,16:18:43.46:416,43,0	1/1:4,23:27:69.03:631,69,0	1/1:3,12:15:36.01:329,36,0	1/1:1,21:22:60.03:549,60,0	1/1:2,25:27:66.03:604,66,0	1/1:2,28:30:84.04:769,84,0	1/1:0,20:20:60.03:549,60,0	1/1:1,27:28:81.03:735,81,0	1/1:1,18:19:54.03:494,54,0	1/1:1,6:7:12.01:110,12,0
chr10	27128269	.	AT	A	7709.80	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=7.578;DP=350;FS=5.774;HRun=7;HaplotypeScore=34.8382;InbreedingCoeff=0.8928;MQ=70.30;MQ0=0;MQRankSum=-2.679;QD=27.05;ReadPosRankSum=4.656;VQSLOD=4.8260;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,14:15:42.10:429,42,0	0/0:6,0:6:18.02:0,18,198	0/0:7,0:7:9.92:0,10,139	0/0:3,0:3:9:0,9,96	1/1:1,16:17:45.10:459,45,0	1/1:1,17:18:51.12:520,51,0	1/1:1,6:7:15.03:153,15,0	0/0:33,0:33:84.26:0,84,1044	1/1:1,5:6:15.03:153,15,0	1/1:1,11:12:33.07:337,33,0	1/1:1,11:12:30.06:306,30,0	1/1:0,6:6:15.03:153,15,0	1/1:0,9:9:27.06:276,27,0	1/1:1,10:11:30.06:306,30,0	1/1:2,5:7:12.02:122,12,0	1/1:1,10:11:30.07:306,30,0	0/0:16,0:16:33.11:0,33,415	1/1:2,19:21:54.12:551,54,0	1/1:1,15:16:45.10:456,45,0	1/1:3,9:12:27.05:275,27,0	1/1:1,2:3:6.01:61,6,0	1/1:0,3:3:9.02:92,9,0	1/1:2,4:6:9.02:92,9,0	1/1:0,3:3:9.02:92,9,0	1/1:1,13:14:39.09:398,39,0	1/1:1,24:25:72.16:734,72,0	1/1:3,26:29:78.18:796,78,0	1/1:1,21:22:63.14:643,63,0
chr10	27130037	.	G	GA	9766.80	PASS	AB=0.611;AC=27;AF=0.482;AN=56;BaseQRankSum=-13.599;DP=669;FS=0.635;HRun=9;HaplotypeScore=61.9954;InbreedingCoeff=0.9337;MQ=68.77;MQ0=0;MQRankSum=-2.281;QD=26.54;ReadPosRankSum=0.088;VQSLOD=5.0739;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,22:23:54.15:597,54,0	0/0:6,0:6:14.99:0,15,130	0/0:16,0:16:18.07:0,18,223	0/0:7,0:7:15.88:0,16,132	1/1:4,23:28:45.97:718,46,0	0/0:29,0:29:77.98:0,78,677	0/0:19,0:19:44.96:0,45,386	0/0:30,0:30:68.93:0,69,590	1/1:3,21:24:54.15:597,54,0	1/1:6,35:41:99:1142,105,0	1/1:4,20:24:54.15:597,54,0	0/0:23,0:23:38.58:0,39,496	0/0:23,0:23:47.94:0,48,408	0/0:34,0:34:86.95:0,87,751	0/0:24,0:24:68.99:0,69,599	1/1:0,28:28:78.21:863,78,0	0/0:23,0:23:59.97:0,60,521	1/1:4,13:17:34.64:369,35,0	0/1:8,14:22:7:374,0,7	1/1:5,22:27:17.07:645,17,0	1/1:3,22:25:66.18:730,66,0	0/0:30,0:30:83.98:0,84,729	0/0:21,1:22:26.80:0,27,462	0/0:15,0:15:35.99:0,36,312	1/1:1,16:17:45.12:498,45,0	1/1:2,32:34:96.23:1043,96,0	1/1:4,38:42:99:1095,99,0	1/1:0,16:16:45.12:498,45,0
chr10	27130413	.	C	CAAAA	12666.50	PASS	AB=0.630;AC=51;AF=0.911;AN=56;BaseQRankSum=-3.094;DP=561;FS=9.465;HRun=13;HaplotypeScore=130.2459;InbreedingCoeff=0.6595;MQ=67.11;MQ0=1;MQRankSum=-4.580;QD=23.94;ReadPosRankSum=-2.199;VQSLOD=2.1999;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,0:16:13.84:181,14,0	1/1:6,0:6:9:117,9,0	0/0:16,0:16:15.70:0,16,168	0/0:13,0:15:18.86:0,19,209	1/1:18,8:46:98.05:1423,98,0	1/1:7,10:21:27.09:506,27,0	1/1:3,0:7:12.01:153,12,0	1/1:21,1:31:63.07:774,63,0	1/1:8,0:14:14.97:205,15,0	1/1:14,14:33:65.03:1167,65,0	1/1:13,12:26:49.92:754,50,0	1/1:3,14:18:8.24:131,8,0	1/1:4,11:16:18.06:300,18,0	1/1:3,9:13:21.03:379,21,0	1/1:5,0:19:8.80:54,9,0	1/1:13,2:29:30.10:524,30,0	0/1:7,0:16:43.92:217,0,44	1/1:9,0:9:18.06:288,18,0	1/1:9,2:21:42.11:681,42,0	1/1:12,11:27:51.01:767,51,0	1/1:2,1:10:12.04:219,12,0	1/1:8,13:24:42.10:788,42,0	1/1:4,14:21:23.22:291,23,0	1/1:3,0:12:12.04:197,12,0	1/1:4,1:13:15.05:274,15,0	1/1:16,15:34:74.06:1328,74,0	1/1:14,10:28:30.10:549,30,0	1/1:4,2:17:21.07:400,21,0
chr10	27131982	.	C	CCTCTCCCTCTCT	8032.14	PASS	AB=0.986;AC=49;AF=0.875;AN=56;BaseQRankSum=-0.414;DP=661;FS=31.139;HRun=0;HaplotypeScore=219.6381;InbreedingCoeff=0.4234;MQ=45.29;MQ0=35;MQRankSum=1.559;QD=14.32;ReadPosRankSum=-0.016;VQSLOD=2.5529;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:6,1:27:8.94:171,9,0	1/1:3,0:3:5.93:40,6,0	0/0:38,0:11:19.52:0,20,149	0/0:62,0:16:9.20:0,9,171	1/1:26,0:24:17.72:213,18,0	1/1:40,0:36:50.02:391,50,0	1/1:23,0:20:28.68:235,29,0	1/1:41,0:37:68.56:525,69,0	1/1:28,0:28:49.13:495,49,0	1/1:24,0:20:44.05:751,44,0	1/1:5,1:14:1.72:5,2,0	1/1:12,0:12:23.84:190,24,0	1/1:19,0:19:23.70:225,24,0	1/1:22,0:20:23.74:223,24,0	0/1:22,0:22:29.62:30,0,154	1/1:18,0:18:35.92:325,36,0	0/1:18,0:17:10.78:334,0,11	1/1:9,0:7:17.93:171,18,0	1/1:10,8:18:44.01:614,44,0	1/1:12,0:11:3:25,3,0	1/1:32,0:31:25.08:360,25,0	1/1:17,0:17:21.36:165,21,0	1/1:11,0:12:4.08:110,4,0	0/1:27,0:25:1.92:129,0,2	1/1:24,0:24:15.98:396,16,0	1/1:26,0:25:65.46:1031,65,0	1/1:17,0:17:44.13:559,44,0	1/1:17,0:14:35.80:321,36,0
chr10	27132655	.	TGGGA	T	35.68	PASS	AC=2;AF=0.111;AN=18;BaseQRankSum=0.442;DP=267;FS=0.000;HRun=0;HaplotypeScore=23.9284;MQ=13.02;MQ0=207;MQRankSum=0.925;QD=5.95;ReadPosRankSum=0.442;VQSLOD=0.8065;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	1/1:0,6:3:6.02:110,6,0	./.	./.	0/0:13,0:6:9.03:0,9,236	./.	./.	./.	./.	0/0:12,0:2:6.02:0,6,158	0/0:15,0:6:12.04:0,12,315	./.	./.	./.	./.	./.	./.	./.	./.	0/0:13,0:10:20.94:0,21,376	./.	./.	0/0:9,0:4:6.02:0,6,157	./.	0/0:11,0:3:8.99:0,9,150	0/0:11,0:4:8.94:0,9,119	./.	0/0:11,0:5:15.01:0,15,336
chr10	27136779	.	A	AG	1748.99	PASS	AB=0.941;AC=30;AF=0.882;AN=34;BaseQRankSum=0.248;DP=821;FS=0.000;HRun=0;HaplotypeScore=16.6830;InbreedingCoeff=0.0531;MQ=9.63;MQ0=538;MQRankSum=-1.122;QD=3.11;ReadPosRankSum=2.608;VQSLOD=2.0148;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	0/1:25,1:3:32.81:56,0,33	./.	./.	1/1:27,5:4:11.96:156,12,0	1/1:37,2:4:8.98:113,9,0	./.	./.	0/0:41,0:2:2.98:0,3,21	1/1:59,4:12:26.71:278,27,0	1/1:25,1:1:3.01:46,3,0	0/1:21,2:4:8.94:101,0,9	1/1:50,1:2:5.97:66,6,0	1/1:34,0:2:5.91:39,6,0	1/1:34,0:5:11.82:78,12,0	1/1:24,1:3:5.90:37,6,0	./.	./.	./.	1/1:24,1:1:3.01:37,3,0	./.	1/1:41,1:3:2.96:19,3,0	1/1:29,0:1:2.96:19,3,0	./.	1/1:25,0:1:2.96:19,3,0	1/1:35,5:6:17.95:217,18,0	1/1:35,14:20:26.96:565,27,0	./.
chr10	27136897	.	AC	A	866.29	PASS	AB=0.868;AC=14;AF=0.700;AN=20;BaseQRankSum=-2.074;DP=670;FS=0.000;HRun=1;HaplotypeScore=23.9392;InbreedingCoeff=-0.1278;MQ=7.54;MQ0=579;MQRankSum=0.590;QD=4.21;ReadPosRankSum=-0.704;VQSLOD=-0.0293;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	0/0:13,0:3:6.02:0,6,96	./.	./.	1/1:5,3:3:5.98:62,6,0	./.	./.	./.	./.	1/1:24,2:2:6.02:84,6,0	0/1:17,7:8:29.73:126,0,30	./.	./.	./.	./.	./.	./.	./.	./.	1/1:32,7:7:18.02:229,18,0	./.	0/1:15,4:6:32.73:130,0,33	0/1:21,2:6:68.73:69,0,97	./.	1/1:22,5:6:15.01:187,15,0	1/1:19,1:1:3.01:42,3,0	./.	0/1:19,1:2:35.87:36,0,42
chr10	27139474	.	T	TA	1028.19	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-1.103;DP=298;FS=0.000;HRun=9;HaplotypeScore=57.6791;InbreedingCoeff=0.8693;MQ=61.62;MQ0=27;MQRankSum=-1.782;QD=18.69;ReadPosRankSum=0.148;VQSLOD=3.5308;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:17:30.78:0,31,192	0/0:7,0:6:18:0,18,162	0/0:16,0:8:16.53:0,17,125	0/0:7,0:5:5.97:0,6,52	0/0:18,0:18:39.88:0,40,244	1/1:3,3:6:12.02:124,12,0	1/1:1,3:3:6.02:66,6,0	0/0:23,0:21:38.71:0,39,338	0/0:6,0:5:12.59:0,13,67	0/0:12,0:12:19.15:0,19,125	0/0:7,0:6:11:0,11,82	1/1:1,4:5:9.02:100,9,0	1/1:2,1:2:6.01:63,6,0	1/1:5,6:9:20.89:213,21,0	1/1:1,8:8:24.06:265,24,0	0/0:8,0:8:20.70:0,21,130	0/0:20,0:17:44.97:0,45,386	0/0:7,0:5:10.99:0,11,63	0/0:16,0:14:32.62:0,33,210	0/0:10,0:9:24.57:0,25,171	0/0:12,0:7:13.18:0,13,80	1/1:0,3:3:9.02:97,9,0	1/1:1,5:6:12.03:133,12,0	1/1:4,4:6:15.04:166,15,0	0/0:13,0:13:32.68:0,33,232	0/0:16,1:14:5.42:0,5,205	0/0:17,0:15:17.07:0,17,174	0/0:9,0:5:11.88:0,12,86
chr10	27139507	.	TAC	T	590.46	PASS	AB=0.975;AC=26;AF=0.542;AN=48;BaseQRankSum=0.442;DP=382;FS=0.000;HRun=0;HaplotypeScore=73.6634;InbreedingCoeff=0.2019;MQ=63.67;MQ0=9;MQRankSum=1.630;QD=2.89;ReadPosRankSum=-0.854;VQSLOD=1.6198;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:21,0:20:7.05:7,0,38	0/1:7,0:8:6.34:20,0,6	./.	./.	0/0:23,0:23:26.92:0,27,292	1/1:9,0:9:3.31:15,3,0	1/1:4,0:6:5.72:29,6,0	./.	0/0:10,0:10:12.02:0,12,157	0/0:11,0:9:8.99:0,9,103	0/1:9,1:10:17.12:17,0,104	1/1:7,2:9:10.54:88,11,0	1/1:4,0:4:2.84:14,3,0	1/1:9,1:10:3:32,3,0	1/1:8,1:9:9:83,9,0	0/0:9,0:9:6.02:0,6,85	./.	0/0:9,0:9:6.02:0,6,89	0/1:15,0:15:19.51:20,0,69	0/1:11,0:12:3.38:3,0,122	0/1:18,0:16:3.90:4,0,108	1/1:9,0:10:3.72:16,4,0	1/1:8,2:10:14.95:146,15,0	1/1:11,2:14:25.34:222,25,0	0/1:21,0:21:18:18,0,221	0/0:22,0:22:21.59:0,22,230	0/1:16,0:16:14.07:14,0,194	0/0:5,0:5:2.99:0,3,23
chr10	27140585	.	A	AG	12579.86	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=1.113;DP=570;FS=1.844;HRun=1;HaplotypeScore=94.7483;InbreedingCoeff=0.9831;MQ=69.30;MQ0=2;MQRankSum=-4.056;QD=28.79;ReadPosRankSum=6.282;VQSLOD=4.5537;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,31:33:41.26:1010,41,0	0/0:15,0:15:39.11:0,39,471	0/0:25,0:19:51.63:0,52,462	0/0:26,0:23:30.67:0,31,359	1/1:1,31:32:87.11:1191,87,0	1/1:12,0:12:26.84:228,27,0	1/1:11,1:12:23.80:207,24,0	0/0:29,0:29:81.15:0,81,925	1/1:0,14:14:33.11:480,33,0	1/1:0,14:14:42.08:553,42,0	1/1:1,19:20:50.99:662,51,0	1/1:16,0:16:23.51:183,24,0	1/1:12,0:12:29.92:268,30,0	1/1:17,1:18:32.88:281,33,0	1/1:1,19:20:48.15:680,48,0	1/1:0,19:19:24.08:349,24,0	0/0:34,0:34:99:0,102,1196	1/1:1,20:22:51.07:690,51,0	1/1:2,28:31:86.93:1115,87,0	1/1:1,28:29:80.68:962,81,0	1/1:0,9:9:21.07:306,21,0	1/1:13,0:12:32.79:262,33,0	1/1:21,0:21:38.67:316,39,0	1/1:7,0:7:9:78,9,0	1/1:0,19:19:39.13:568,39,0	1/1:0,23:23:69.19:933,69,0	1/1:0,24:24:60.20:868,60,0	1/1:3,14:17:26.92:392,27,0
chr10	27140586	.	G	GGAAA	7262.96	PASS	AB=0.992;AC=42;AF=0.750;AN=56;BaseQRankSum=8.769;DP=573;FS=1.266;HRun=0;HaplotypeScore=144.0594;InbreedingCoeff=0.6121;MQ=69.02;MQ0=2;MQRankSum=-5.003;QD=16.39;ReadPosRankSum=7.677;VQSLOD=4.2745;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:32,0:32:2.02:83,0,2	0/0:15,0:15:39.09:0,39,714	0/0:26,0:18:23.34:0,23,528	0/0:27,0:22:18.91:0,19,413	1/1:32,0:32:2.40:106,2,0	1/1:0,11:14:27.09:762,27,0	1/1:1,7:11:24.08:594,24,0	0/0:28,0:28:81.09:0,81,1418	1/1:14,0:14:22.41:63,22,0	1/1:14,0:14:2.37:76,2,0	1/1:17,0:18:33.32:147,33,0	1/1:0,14:17:24.08:650,24,0	1/1:0,11:13:30.02:824,30,0	1/1:1,14:20:33.11:893,33,0	1/1:18,0:19:33.78:127,34,0	1/1:18,0:18:17.22:84,17,0	0/0:34,0:34:99:0,102,1898	1/1:22,0:22:35.31:125,35,0	0/1:30,0:31:16.09:166,0,16	0/1:30,0:30:39.88:157,0,40	1/1:9,0:9:14.26:40,14,0	1/1:1,9:13:32.94:742,33,0	1/1:1,19:24:43.79:1016,44,0	1/1:0,6:8:9.03:255,9,0	1/1:19,0:19:26.48:75,26,0	1/1:23,0:23:26.75:138,27,0	1/1:24,0:24:39.47:110,39,0	0/1:17,0:17:0.95:29,0,1
chr10	27140824	.	CT	C	9954.25	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=5.479;DP=534;FS=5.396;HRun=9;HaplotypeScore=70.7150;InbreedingCoeff=0.9853;MQ=83.09;MQ0=1;MQRankSum=-5.560;QD=22.67;ReadPosRankSum=5.243;VQSLOD=5.5155;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:2,17:19:48.02:439,48,0	0/0:5,0:5:9.03:0,9,104	0/0:29,0:29:59.54:0,60,653	0/0:19,0:17:37.18:0,37,353	1/1:1,23:24:57.02:522,57,0	1/1:0,24:24:66.04:604,66,0	1/1:1,13:14:36.02:330,36,0	0/0:27,0:27:69.18:0,69,771	1/1:2,13:15:33.02:302,33,0	1/1:2,17:19:51.01:461,51,0	1/1:3,16:19:44.81:382,45,0	1/1:1,14:15:42.02:384,42,0	1/1:1,21:22:48.03:439,48,0	1/1:2,15:17:39.01:357,39,0	1/1:1,19:20:54.03:494,54,0	1/1:1,20:21:60.03:549,60,0	0/0:14,0:14:33.09:0,33,371	1/1:2,15:17:39.01:357,39,0	1/1:2,19:21:57:512,57,0	1/1:0,28:28:75:678,75,0	1/1:0,13:13:39.02:357,39,0	1/1:3,10:13:27:247,27,0	1/1:0,13:13:33.02:302,33,0	1/1:2,15:17:42.02:384,42,0	1/1:5,21:26:54.02:494,54,0	1/1:2,13:15:38.97:344,39,0	1/1:7,30:37:87.02:796,87,0	1/1:2,8:10:24.01:220,24,0
chr10	27144342	.	A	ATATCATC	17855.52	PASS	AB=0.929;AC=51;AF=0.911;AN=56;BaseQRankSum=1.712;DP=601;FS=6.603;HRun=0;HaplotypeScore=218.1917;InbreedingCoeff=0.8072;MQ=63.01;MQ0=5;MQRankSum=-5.810;QD=31.38;ReadPosRankSum=3.401;VQSLOD=3.8441;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:21:24.08:387,24,0	1/1:2,10:14:5.98:214,6,0	0/0:16,0:13:36.11:0,36,524	0/0:16,0:15:35.09:0,35,462	1/1:35,0:31:39.11:741,39,0	1/1:22,0:21:39.11:662,39,0	1/1:13,0:12:30.10:468,30,0	1/1:37,0:37:99:1488,108,0	1/1:16,0:13:21.07:458,21,0	1/1:33,0:29:74.44:1491,74,0	1/1:25,0:22:33.10:546,33,0	1/1:14,0:14:21.07:411,21,0	1/1:30,0:28:51.17:990,51,0	1/1:26,0:25:39.13:615,39,0	1/1:25,0:21:30.10:438,30,0	1/1:17,0:15:27.09:400,27,0	1/1:13,0:13:24.08:406,24,0	1/1:8,0:8:18.53:252,19,0	1/1:20,0:19:48.15:747,48,0	1/1:31,0:28:57.19:1074,57,0	1/1:14,0:14:24.08:384,24,0	1/1:22,0:19:33.11:663,33,0	1/1:29,0:28:48.16:802,48,0	0/1:12,0:12:1.84:153,0,2	1/1:18,0:18:30.08:474,30,0	1/1:30,0:27:78.26:1658,78,0	1/1:29,0:28:72.24:1340,72,0	1/1:13,0:11:33.11:593,33,0
chr10	27144343	.	T	TATC	15279.53	PASS	AB=0.986;AC=50;AF=0.893;AN=56;BaseQRankSum=0.873;DP=613;FS=6.484;HRun=0;HaplotypeScore=198.0670;InbreedingCoeff=0.6316;MQ=61.61;MQ0=5;MQRankSum=-4.409;QD=26.25;ReadPosRankSum=5.698;VQSLOD=3.7583;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:24,1:24:26.66:339,27,0	1/1:14,0:14:5.88:74,6,0	0/0:16,0:13:36.11:0,36,524	0/0:15,0:14:35.55:0,36,464	0/1:34,1:31:3.71:492,0,4	1/1:22,1:22:18.71:586,19,0	1/1:13,0:12:21.41:422,21,0	1/1:39,0:39:99:1544,114,0	1/1:16,0:13:21.07:320,21,0	1/1:31,0:27:14.48:965,14,0	1/1:24,1:22:33.10:455,33,0	1/1:12,2:14:21.07:354,21,0	1/1:25,5:28:51.17:919,51,0	1/1:23,1:23:27.30:544,27,0	1/1:25,0:21:30.10:430,30,0	1/1:16,1:15:5.20:375,5,0	1/1:13,1:14:21.07:293,21,0	1/1:8,0:8:20.74:262,21,0	1/1:20,0:19:48.14:675,48,0	1/1:28,5:30:57.19:975,57,0	1/1:16,0:16:23.96:359,24,0	1/1:22,0:19:33.11:482,33,0	1/1:28,3:30:26.27:746,26,0	0/1:13,0:12:1.84:153,0,2	1/1:16,4:18:8.66:407,9,0	1/1:13,17:27:75.73:1347,76,0	1/1:26,4:29:72.16:1212,72,0	1/1:12,2:12:33.11:550,33,0
chr10	27144346	.	CT	C	11619.19	PASS	AB=0.635;AC=38;AF=0.679;AN=56;BaseQRankSum=5.034;DP=612;FS=1.652;HRun=1;HaplotypeScore=180.1008;InbreedingCoeff=-0.1492;MQ=60.60;MQ0=7;MQRankSum=-3.725;QD=19.96;ReadPosRankSum=8.806;VQSLOD=4.5296;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,18:23:23.72:323,24,0	0/1:13,0:13:19.21:19,0,44	0/0:16,0:13:36.11:0,36,524	0/0:14,0:13:35.42:0,35,464	0/1:12,22:30:54.09:416,0,54	0/1:5,15:19:53.84:375,0,54	0/1:3,12:14:67.37:294,0,67	0/1:7,36:41:35.77:1368,0,36	1/1:3,12:12:21.07:293,21,0	0/1:12,22:30:99:753,0,241	1/1:10,16:23:33:435,33,0	1/1:3,10:13:17.95:230,18,0	1/1:8,21:27:50.80:551,51,0	0/1:8,15:22:6.76:423,0,7	0/1:8,16:20:13.05:387,0,13	0/1:5,11:14:17.87:345,0,18	1/1:4,9:13:20.98:293,21,0	1/1:0,7:8:15.86:247,16,0	1/1:1,18:18:4.41:582,4,0	1/1:13,20:30:56.88:677,57,0	1/1:5,10:15:23.64:331,24,0	1/1:5,17:19:33.11:450,33,0	0/1:7,23:29:41.78:552,0,42	0/1:5,9:14:60.14:147,0,60	0/1:13,9:20:82.83:298,0,83	1/1:20,9:26:28.66:849,29,0	0/1:12,21:32:20.95:725,0,21	0/1:9,6:13:99:257,0,102
chr10	27144393	.	TCAA	T	2499.61	PASS	AB=0.878;AC=23;AF=0.411;AN=56;BaseQRankSum=11.239;DP=696;FS=10.240;HRun=0;HaplotypeScore=269.6356;InbreedingCoeff=-0.5620;MQ=42.40;MQ0=7;MQRankSum=-8.374;QD=4.36;ReadPosRankSum=-0.859;VQSLOD=0.8509;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:16,4:19:14.80:39,0,15	0/1:13,0:12:40.70:41,0,171	0/0:28,0:17:41.91:0,42,823	0/0:14,0:8:17.19:0,17,323	0/1:33,12:37:99:161,0,546	0/1:16,2:17:78.85:79,0,489	0/1:11,3:13:41.73:42,0,436	0/0:44,0:39:99:0,105,2184	0/1:17,6:20:99:123,0,319	0/1:32,11:37:99:441,0,1396	0/1:29,5:28:70.05:70,0,483	0/1:18,2:20:72:72,0,262	0/1:34,5:37:99:198,0,446	0/1:20,2:20:32.86:33,0,240	0/1:34,1:31:13.35:13,0,434	0/1:16,0:15:1.48:1,0,327	0/0:8,0:9:14.89:0,15,314	1/1:5,0:4:6.39:23,6,0	0/1:17,3:17:91.94:92,0,641	0/1:36,7:35:99:174,0,341	0/1:9,1:10:36.80:37,0,176	0/1:17,9:23:99:185,0,112	0/1:21,4:24:67.28:67,0,487	0/0:9,2:10:6.02:0,6,135	0/1:38,2:36:30.28:30,0,319	0/1:23,4:23:99:463,0,346	0/1:30,5:32:99:275,0,534	0/0:16,0:14:6.91:0,7,429
chr10	27144409	.	TATC	T	1115.30	PASS	AB=0.962;AC=17;AF=0.304;AN=56;BaseQRankSum=11.806;DP=724;FS=5.358;HRun=0;HaplotypeScore=293.2664;InbreedingCoeff=-0.3174;MQ=41.54;MQ0=7;MQRankSum=-10.322;QD=2.31;ReadPosRankSum=-6.290;VQSLOD=0.2608;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:20,0:20:12.35:12,0,61	0/0:11,0:10:5.76:0,6,179	0/0:32,0:18:44.90:0,45,859	0/0:23,0:13:24.07:0,24,481	0/1:55,0:46:83.45:83,0,638	0/1:14,2:15:20.84:21,0,512	0/0:12,0:11:24.08:0,24,544	0/0:41,0:39:99:0,114,2291	0/1:25,0:22:85.41:85,0,317	0/1:43,0:37:99:113,0,1503	0/1:38,0:32:41.89:42,0,514	0/0:18,0:18:27.82:0,28,465	0/1:31,2:31:84.51:85,0,628	0/1:24,1:23:6.08:6,0,418	0/0:35,0:31:1.50:0,1,455	0/0:15,0:14:18.06:0,18,385	0/0:13,0:13:16.87:0,17,345	1/1:3,0:3:8.74:82,9,0	0/1:22,0:18:11.05:11,0,667	0/1:41,4:38:80.07:80,0,367	0/0:10,0:10:7.57:0,8,202	0/1:25,0:22:99:126,0,119	0/1:24,2:25:17.17:17,0,530	0/0:14,0:13:6.02:0,6,136	0/1:38,1:36:12.67:13,0,385	0/1:28,2:25:99:176,0,603	0/1:33,5:35:99:319,0,560	0/0:17,0:15:5.29:0,5,579
chr10	27144420	.	TATC	T	849	PASS	AB=0.932;AC=17;AF=0.304;AN=56;BaseQRankSum=7.822;DP=712;FS=5.632;HRun=0;HaplotypeScore=274.1518;InbreedingCoeff=-0.4758;MQ=42.20;MQ0=8;MQRankSum=-4.208;QD=1.75;ReadPosRankSum=-7.570;VQSLOD=0.0881;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:15,6:20:19.71:20,0,62	0/0:10,0:9:2.73:0,3,79	0/0:24,0:10:18.06:0,18,241	0/0:20,0:13:30.09:0,30,393	0/1:54,2:47:87.77:88,0,396	0/1:16,0:15:21.57:22,0,366	0/1:12,0:12:7.09:7,0,235	0/1:40,0:39:35.83:36,0,1325	0/0:23,0:21:10.25:0,10,307	0/1:36,2:33:56.94:57,0,1052	0/1:34,4:32:13.42:13,0,337	0/1:18,0:18:22.08:22,0,297	0/0:35,0:34:29.94:0,30,453	0/0:20,0:18:27.17:0,27,293	0/1:24,12:32:19.11:19,0,319	0/1:17,0:16:23.07:23,0,317	0/1:16,0:16:74.93:75,0,246	0/1:6,1:6:61.88:92,0,62	0/0:22,0:17:15.43:0,15,503	0/1:43,1:37:83.37:83,0,226	0/0:10,0:10:7.57:0,8,124	0/0:27,0:25:2.23:0,2,92	0/1:20,2:22:62.59:63,0,286	0/0:17,0:16:6.02:0,6,84	0/1:33,4:35:40.63:41,0,274	0/1:26,2:23:99:118,0,605	0/1:35,5:37:99:225,0,371	0/0:18,0:16:9.67:0,10,453
chr10	27144458	.	C	CTA	1173.88	PASS	AB=0.913;AC=17;AF=0.304;AN=56;BaseQRankSum=9.786;DP=662;FS=5.702;HRun=0;HaplotypeScore=225.4474;InbreedingCoeff=-0.4472;MQ=51.94;MQ0=3;MQRankSum=-8.206;QD=3.19;ReadPosRankSum=-4.651;VQSLOD=1.1171;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:24,1:24:19.58:20,0,409	0/0:4,0:3:6.02:0,6,91	0/0:31,0:21:60.40:0,60,786	0/0:31,0:22:60.13:0,60,841	0/0:34,8:37:52.81:0,53,710	0/1:10,1:10:0.10:0,0,238	0/1:10,0:10:42.35:42,0,80	0/1:46,0:45:85.85:86,0,1119	0/1:19,3:20:36.32:36,0,166	0/1:23,5:26:99:341,0,513	0/1:29,4:30:12.11:12,0,433	0/1:18,0:18:72.77:96,0,73	0/1:32,0:32:92.79:93,0,374	0/1:25,2:26:75.71:76,0,255	0/0:24,3:27:19.77:0,20,257	0/1:14,2:16:54.54:55,0,174	0/1:16,1:17:26.67:27,0,269	0/1:7,0:7:82.55:83,0,163	0/1:16,2:14:82.36:82,0,287	0/0:35,7:37:27.16:0,27,716	0/0:22,0:22:45.14:0,45,658	0/0:21,0:21:4.09:0,4,213	0/0:19,1:20:17.52:0,18,516	0/0:17,2:18:12.02:0,12,161	0/0:23,12:32:3.67:0,4,356	0/1:18,3:19:99:148,0,341	0/1:24,3:25:48.51:49,0,341	0/1:3,6:9:83.22:83,0,117
chr10	27144640	.	TTC	T	994.26	PASS	AB=0.959;AC=25;AF=0.463;AN=54;BaseQRankSum=4.510;DP=620;FS=7.877;HRun=0;HaplotypeScore=137.3578;InbreedingCoeff=-0.0553;MQ=53.51;MQ0=27;MQRankSum=1.537;QD=3.21;ReadPosRankSum=2.341;VQSLOD=2.2750;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:20,1:21:16.49:88,0,16	0/1:7,1:7:62.88:63,0,177	0/0:71,1:16:30.98:0,31,441	0/0:93,0:31:23.92:0,24,632	0/0:24,1:21:7.14:0,7,81	0/1:9,1:9:14.20:14,0,16	0/0:17,1:17:3.42:0,3,8	0/0:35,0:34:93.29:0,93,1498	0/1:20,3:23:8.68:249,0,9	1/1:27,0:26:4.69:134,5,0	0/0:9,2:11:3.47:0,3,28	0/0:19,0:19:16.98:0,17,88	0/1:25,0:26:54.71:83,0,55	0/1:15,1:16:22.91:27,0,23	1/1:19,1:20:5.67:28,6,0	0/1:14,0:14:1.06:125,0,1	0/1:24,1:24:43.82:44,0,577	1/1:6,0:6:4.28:21,4,0	1/1:9,0:9:4.17:20,4,0	0/0:18,0:15:6.42:0,6,43	1/1:15,0:14:2.99:26,3,0	0/1:14,0:14:8.04:8,0,17	1/1:9,0:9:3.43:23,3,0	0/1:13,0:18:0.68:40,0,1	./.	0/1:24,2:25:77.35:135,0,77	0/1:15,0:14:8.90:9,0,66	0/1:6,0:6:13.34:13,0,17
chr10	27144641	.	TCCTC	T	4831.73	PASS	AB=1.000;AC=41;AF=0.759;AN=54;BaseQRankSum=6.518;DP=623;FS=11.565;HRun=0;HaplotypeScore=137.2500;InbreedingCoeff=0.4720;MQ=53.26;MQ0=32;MQRankSum=0.497;QD=12.72;ReadPosRankSum=1.666;VQSLOD=3.7385;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:22:82.08:263,0,82	0/1:8,0:7:2.32:2,0,181	0/0:70,0:15:30.10:0,30,209	0/0:96,0:31:9.15:0,9,335	1/1:24,0:20:32.89:298,33,0	0/1:10,0:9:1.23:133,0,1	1/1:18,0:17:40.97:329,41,0	0/0:36,0:35:97.68:0,98,798	1/1:19,0:24:10.15:262,10,0	1/1:2,24:26:70.36:597,70,0	1/1:10,0:10:8.96:73,9,0	0/1:19,0:19:40.87:162,0,41	1/1:26,0:26:29.54:375,30,0	0/1:16,0:16:43.07:197,0,43	1/1:3,18:21:8.99:142,9,0	1/1:13,0:14:34.35:341,34,0	0/0:26,0:25:17.05:0,17,340	1/1:6,0:6:14.40:94,14,0	1/1:9,0:9:26.32:215,26,0	1/1:3,15:15:5.93:40,6,0	1/1:1,14:14:5.98:69,6,0	1/1:14,0:14:30.84:254,31,0	1/1:9,0:9:19.94:144,20,0	1/1:21,0:18:8.38:128,8,0	./.	1/1:22,1:23:6.73:381,7,0	1/1:14,1:13:19.90:250,20,0	1/1:7,0:6:12.75:83,13,0
chr10	27147847	.	A	AAACAAC	9759.67	PASS	AB=1.000;AC=44;AF=0.786;AN=56;BaseQRankSum=0.352;DP=497;FS=10.963;HRun=0;HaplotypeScore=105.9818;InbreedingCoeff=0.8164;MQ=56.96;MQ0=9;MQRankSum=-3.685;QD=25.82;ReadPosRankSum=1.704;VQSLOD=3.7990;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:23,4:27:29.28:548,29,0	0/1:7,0:7:1.15:1,0,55	0/0:27,0:17:5.99:0,6,60	0/0:24,0:18:7.30:0,7,107	1/1:25,2:27:20.97:446,21,0	1/1:3,18:24:24.08:774,24,0	1/1:15,1:17:32.87:534,33,0	0/0:22,0:22:18.35:0,18,233	1/1:12,2:14:11.97:282,12,0	1/1:16,4:20:33.03:635,33,0	1/1:14,3:17:21.36:370,21,0	1/1:6,5:13:8.96:212,9,0	1/1:12,7:19:32.87:774,33,0	1/1:9,6:16:35.95:760,36,0	0/0:4,0:19:12.63:0,13,174	1/1:11,4:15:18.06:533,18,0	0/0:27,0:26:45.14:0,45,845	1/1:7,2:9:11.95:234,12,0	1/1:13,3:17:20.96:458,21,0	1/1:14,3:16:21.03:446,21,0	1/1:12,1:10:11.82:134,12,0	1/1:10,0:10:12.03:165,12,0	1/1:16,3:19:28.86:478,29,0	1/1:18,3:20:14.84:108,15,0	1/1:16,6:21:39.07:964,39,0	1/1:9,3:11:20.93:375,21,0	1/1:14,3:17:24.04:529,24,0	0/1:4,0:4:0:0,0,0
chr10	27147893	.	AACCAC	A	2612.99	PASS	AB=1.000;AC=35;AF=0.625;AN=56;BaseQRankSum=2.939;DP=477;FS=2.880;HRun=0;HaplotypeScore=116.1891;InbreedingCoeff=0.4655;MQ=42.20;MQ0=38;MQRankSum=-2.221;QD=9.57;ReadPosRankSum=2.661;VQSLOD=2.7385;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:14:3.01:32,3,0	1/1:6,0:6:5.93:40,6,0	0/0:55,0:23:56.65:0,57,682	0/0:56,0:23:54.59:0,55,695	1/1:11,6:13:12.03:208,12,0	0/0:15,0:15:22.67:0,23,194	0/0:15,0:15:24.08:0,24,320	0/0:22,0:22:51.17:0,51,686	1/1:7,6:13:21.03:325,21,0	1/1:16,1:13:24.03:274,24,0	1/1:5,6:10:6.02:122,6,0	0/0:9,0:9:0.70:0,1,128	0/1:19,0:19:10.28:10,0,176	0/1:17,0:17:22.26:57,0,22	0/0:13,0:13:17.89:0,18,244	1/1:6,2:8:9.02:183,9,0	0/0:19,0:18:21.97:0,22,438	1/1:4,5:9:11.95:177,12,0	1/1:19,1:18:29.86:369,30,0	1/1:18,1:13:12.04:180,12,0	1/1:13,0:8:5.99:50,6,0	0/1:9,0:9:23.53:24,0,104	0/1:15,0:14:48.95:49,0,59	0/1:16,0:15:24:24,0,123	1/1:12,4:14:6.02:99,6,0	1/1:13,1:12:18.94:264,19,0	1/1:14,1:15:22.98:260,23,0	1/1:1,2:2:3.01:61,3,0
chr10	27147899	.	AC	A	1441.33	PASS	AB=0.777;AC=23;AF=0.411;AN=56;BaseQRankSum=0.818;DP=481;FS=2.054;HRun=2;HaplotypeScore=98.3748;InbreedingCoeff=0.5493;MQ=42.65;MQ0=41;MQRankSum=0.292;QD=7.43;ReadPosRankSum=3.093;VQSLOD=1.2203;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:13,4:15:3.01:38,3,0	0/0:6,0:6:4.74:0,5,16	0/0:48,0:20:56.66:0,57,682	0/0:53,0:20:54.36:0,54,678	1/1:10,7:13:9.40:72,9,0	0/0:18,0:18:25.50:0,26,230	0/0:17,0:17:23.83:0,24,320	0/0:20,0:19:50.67:0,51,681	0/1:11,2:13:1.74:116,0,2	1/1:13,4:13:20.15:268,20,0	0/1:10,4:13:20.91:21,0,25	0/0:8,0:7:17.75:0,18,201	0/0:22,0:22:30.09:0,30,239	0/0:13,0:13:15.85:0,16,77	0/0:17,0:17:14.94:0,15,144	0/1:7,3:10:27.43:33,0,27	0/0:20,0:19:41.10:0,41,462	1/1:8,1:8:11.77:106,12,0	1/1:15,3:17:28.93:355,29,0	1/1:6,12:11:11.77:106,12,0	1/1:11,1:7:5.98:47,6,0	0/0:14,0:14:13.90:0,14,137	0/0:13,0:12:19.15:0,19,146	0/0:18,0:18:13.90:0,14,142	0/1:11,5:13:14.28:52,0,14	1/1:12,1:11:18.77:178,19,0	0/1:10,7:16:55.23:231,0,55	1/1:3,0:2:2.88:15,3,0
chr10	27147900	.	C	CA	1487.03	PASS	AB=0.873;AC=21;AF=0.375;AN=56;BaseQRankSum=-0.947;DP=479;FS=3.296;HRun=1;HaplotypeScore=98.9179;InbreedingCoeff=0.5772;MQ=42.86;MQ0=43;MQRankSum=-0.003;QD=8.65;ReadPosRankSum=1.971;VQSLOD=1.3083;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,9:13:3.01:39,3,0	0/0:0,1:6:5.97:0,6,44	0/0:48,0:20:56.66:0,57,682	0/0:52,0:19:54.36:0,54,678	1/1:16,2:14:3.56:53,4,0	0/0:18,0:17:25.50:0,26,227	0/0:9,0:16:23.62:0,24,320	0/0:20,0:18:50.67:0,51,681	0/1:12,2:14:8.67:140,0,9	1/1:7,8:11:26.74:296,27,0	0/0:14,0:13:2.74:0,3,34	0/0:8,0:7:18.01:0,18,207	0/0:10,0:22:31.43:0,31,280	0/0:5,0:13:17.88:0,18,132	0/0:16,0:17:10.06:0,10,112	0/0:8,0:8:1.33:0,1,36	0/0:14,0:20:42.04:0,42,497	1/1:11,1:10:7.85:80,8,0	1/1:6,12:17:32.49:354,32,0	1/1:16,3:12:9.43:95,9,0	1/1:1,10:6:6.02:96,6,0	0/0:5,0:14:15:0,15,165	0/0:9,0:12:20.94:0,21,197	0/0:9,0:18:15:0,15,165	0/1:15,2:14:17.63:73,0,18	1/1:2,11:11:16.41:213,16,0	0/1:14,3:16:39.60:231,0,40	1/1:2,1:2:0.47:1,0,0
chr10	27148751	.	AC	A	4234.32	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=9.863;DP=556;FS=1.832;HRun=3;HaplotypeScore=59.1212;InbreedingCoeff=0.9984;MQ=69.14;MQ0=0;MQRankSum=-0.701;QD=30.25;ReadPosRankSum=3.660;VQSLOD=4.5281;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,120,1686	0/0:8,0:8:24.08:0,24,346	0/0:23,0:23:69.19:0,69,939	0/0:29,0:28:68.70:0,69,932	0/0:22,0:22:63.19:0,63,874	1/1:0,16:16:42.13:521,42,0	1/1:1,30:31:69.20:854,69,0	0/0:27,0:27:81.27:0,81,1149	0/0:17,0:17:48.16:0,48,691	0/0:12,0:12:36.12:0,36,516	0/0:13,0:13:39.11:0,39,541	1/1:0,13:13:30.08:369,30,0	1/1:1,8:9:21.07:260,21,0	1/1:0,22:22:54.17:670,54,0	0/0:12,0:12:36.12:0,36,518	0/0:17,0:17:51.16:0,51,718	0/0:26,0:26:75.24:0,75,1060	0/0:28,0:28:81.27:0,81,1157	0/0:18,0:18:54.17:0,54,759	0/0:28,0:28:84.01:0,84,1157	0/0:30,0:30:87.22:0,87,1225	1/1:0,10:10:27.08:335,27,0	1/1:1,13:14:27.08:333,27,0	1/1:0,25:25:72.23:893,72,0	0/0:10,0:10:30.10:0,30,431	0/0:18,0:18:54.17:0,54,754	0/0:24,0:24:69.21:0,69,974	0/0:13,0:13:36.12:0,36,515
chr10	27148912	.	TA	T	7510.72	PASS	AB=1.000;AC=35;AF=0.625;AN=56;BaseQRankSum=-11.001;DP=506;FS=0.000;HRun=9;HaplotypeScore=61.8104;InbreedingCoeff=0.9343;MQ=72.42;MQ0=0;MQRankSum=-1.913;QD=22.49;ReadPosRankSum=1.962;VQSLOD=5.6866;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,33:34:90.04:824,90,0	1/1:2,4:6:12:110,12,0	0/0:17,0:16:33.09:0,33,368	0/1:8,0:8:5.27:5,0,152	1/1:0,20:20:57.03:522,57,0	0/0:3,0:14:25.57:0,26,130	0/0:3,0:24:56.82:0,57,289	1/1:6,27:33:81.01:735,81,0	1/1:2,13:15:33.02:302,33,0	1/1:0,18:18:54.03:494,54,0	1/1:2,15:17:39.01:357,39,0	0/0:3,0:15:28.41:0,28,144	0/0:2,0:11:25.40:0,25,126	0/0:4,0:22:48.76:0,49,246	0/0:17,0:17:39.12:0,39,450	1/1:2,13:15:36.02:330,36,0	1/1:5,23:28:69.03:632,69,0	1/1:2,14:16:30.01:275,30,0	1/1:5,14:19:42.02:384,42,0	1/1:0,21:21:60.03:549,60,0	1/1:0,13:13:33.02:302,33,0	0/0:2,0:18:39.44:0,39,201	0/0:4,0:11:20.04:0,20,113	0/0:4,0:23:51.29:0,51,269	1/1:0,9:9:18.01:165,18,0	1/1:2,21:23:63:566,63,0	1/1:0,27:27:72.04:659,72,0	1/1:0,12:12:33.02:302,33,0
chr10	27149757	.	G	GTACTTCCTGTGACTT	86542.20	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-4.063;DP=593;FS=1.630;HRun=0;HaplotypeScore=229.3544;InbreedingCoeff=0.9912;MQ=78.77;MQ0=0;MQRankSum=-12.703;QD=166.75;ReadPosRankSum=3.585;VQSLOD=5.2217;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,8:16:42.06:2397,42,0	1/1:5,6:11:33.11:2072,33,0	0/0:22,0:22:57.20:0,57,1939	0/0:26,0:26:60.08:0,60,1922	1/1:17,22:39:90.31:5894,90,0	1/1:13,17:30:78.22:5471,78,0	1/1:15,6:21:57.18:3599,57,0	1/1:25,4:31:87.28:4961,87,0	1/1:17,5:22:57.19:3516,57,0	1/1:7,12:19:54.18:3767,54,0	1/1:12,7:20:60.12:3665,60,0	1/1:10,7:17:48.13:2701,48,0	1/1:11,7:18:51.13:3042,51,0	1/1:10,11:21:63.14:4125,63,0	0/0:26,0:26:72.25:0,72,3051	1/1:8,8:19:45.08:2695,45,0	1/1:10,1:12:21.07:1245,21,0	1/1:5,4:9:21.07:1552,21,0	1/1:18,10:29:84.28:4772,84,0	1/1:11,13:26:69.19:4633,69,0	1/1:9,1:12:17.97:737,18,0	1/1:8,9:17:45.15:3080,45,0	1/1:16,11:27:78.18:4624,78,0	1/1:6,2:8:18.06:1184,18,0	1/1:13,11:24:72.12:4072,72,0	1/1:12,12:27:78.27:4911,78,0	1/1:9,19:33:78.15:5401,78,0	1/1:4,7:11:33.11:2429,33,0
chr10	27149776	.	AC	A	3628.57	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=1.860;DP=514;FS=0.400;HRun=5;HaplotypeScore=253.1050;InbreedingCoeff=0.9915;MQ=86.98;MQ0=0;MQRankSum=-3.705;QD=27.28;ReadPosRankSum=1.029;VQSLOD=0.5659;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:39.04:0,39,490	0/0:12,0:12:30.10:0,30,410	0/0:25,0:25:69.16:0,69,891	0/0:27,0:27:68.82:0,69,911	0/0:27,0:27:66.18:0,66,883	1/1:3,21:24:63.18:709,63,0	1/1:4,11:15:33.09:374,33,0	0/0:19,0:19:45.15:0,45,615	0/0:16,0:16:45.15:0,45,614	0/0:21,0:21:60.15:0,60,780	0/0:17,0:17:42.14:0,42,569	1/1:2,12:14:33.09:373,33,0	1/1:1,12:13:30.08:340,30,0	1/1:2,20:22:63.18:713,63,0	0/0:28,0:28:84.28:0,84,1143	0/0:17,0:17:48.15:0,48,641	0/0:9,0:9:21.07:0,21,286	0/0:8,0:8:24.08:0,24,326	0/0:22,0:22:63.21:0,63,851	0/0:20,0:20:54.16:0,54,714	0/0:10,0:10:18.03:0,18,227	1/1:4,12:16:36.10:407,36,0	1/1:2,18:20:51.15:577,51,0	1/1:0,9:9:12.03:136,12,0	0/0:23,0:23:66.20:0,66,883	0/0:25,0:25:72.24:0,72,983	0/0:32,0:32:75.03:0,75,985	0/0:8,0:8:21.07:0,21,283
chr10	27150499	.	G	GA	18482.82	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-10.897;DP=783;FS=2.210;HRun=1;HaplotypeScore=78.6516;InbreedingCoeff=1.0000;MQ=87.36;MQ0=0;MQRankSum=-4.202;QD=41.07;ReadPosRankSum=1.500;VQSLOD=5.3911;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,33:34:87.29:1304,87,0	1/1:0,18:18:51.17:764,51,0	0/0:27,0:27:69.20:0,69,852	0/0:27,0:27:69.13:0,69,856	1/1:2,25:27:75.25:1121,75,0	0/0:33,0:33:93.29:0,93,1193	0/0:24,0:24:72.23:0,72,935	1/1:4,31:35:99:1476,99,0	1/1:0,23:23:57.19:854,57,0	1/1:1,34:35:99:1542,105,0	1/1:1,19:20:51.13:739,51,0	0/0:33,0:33:99:0,99,1285	0/0:54,0:54:99:0,160,2063	0/0:30,0:30:87.27:0,87,1114	0/0:33,0:33:99:0,99,1271	1/1:0,24:24:66.22:990,66,0	1/1:0,24:24:66.22:989,66,0	1/1:1,19:20:54.18:809,54,0	1/1:3,20:23:69.23:1029,69,0	1/1:1,28:29:78.18:1119,78,0	1/1:0,25:25:69.23:1034,69,0	0/0:21,0:21:57.17:0,57,726	0/0:21,0:21:60.18:0,60,765	0/0:30,0:30:87.28:0,87,1130	1/1:0,27:27:72.24:1079,72,0	1/1:2,33:34:99:1429,99,0	1/1:0,40:40:99:1709,114,0	1/1:0,11:11:33.11:495,33,0
chr10	27150952	.	GTCTA	G	5833.08	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=7.637;DP=571;FS=2.423;HRun=0;HaplotypeScore=115.5564;InbreedingCoeff=0.9853;MQ=63.10;MQ0=1;MQRankSum=-2.795;QD=35.14;ReadPosRankSum=3.471;VQSLOD=4.7761;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:36.12:0,36,902	0/0:6,0:9:9.03:0,9,159	0/0:29,0:27:66.23:0,66,1559	0/0:24,0:22:49.41:0,49,1118	0/0:32,0:32:81.26:0,81,1932	1/1:4,16:20:39.13:665,39,0	1/1:1,7:8:15.05:256,15,0	0/0:24,0:27:51.04:0,51,802	1/1:2,16:17:39.13:665,39,0	0/0:34,0:34:87.30:0,87,2150	0/0:25,0:25:57.20:0,57,1391	1/1:5,17:22:48.16:819,48,0	1/1:5,14:19:36.12:614,36,0	1/1:3,20:23:51.17:870,51,0	0/0:14,0:14:20.81:0,21,526	0/0:14,0:14:27.09:0,27,677	0/0:1,0:12:27.09:0,27,476	0/0:13,0:13:18.53:0,19,452	0/0:22,0:22:57.20:0,57,1367	0/0:22,0:22:57.20:0,57,1428	0/0:14,0:14:36.12:0,36,902	1/1:2,21:23:54.18:921,54,0	1/1:0,20:20:39.03:665,39,0	1/1:2,11:13:21.07:358,21,0	0/0:22,0:22:48.16:0,48,1174	0/0:22,0:22:57.20:0,57,1374	0/0:34,0:34:87.30:0,87,2178	0/0:10,0:10:24.08:0,24,601
chr10	27151005	.	T	TTC	3548.56	PASS	AB=0.885;AC=47;AF=0.839;AN=56;BaseQRankSum=0.825;DP=653;FS=5.819;HRun=0;HaplotypeScore=177.8986;InbreedingCoeff=0.5004;MQ=52.86;MQ0=11;MQRankSum=3.368;QD=6.67;ReadPosRankSum=1.877;VQSLOD=3.1484;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:15,1:29:2.68:0,3,24	1/1:12,0:12:14.85:113,15,0	0/0:40,0:18:5.52:0,6,26	0/0:51,0:22:6.95:0,7,72	0/1:17,18:36:0:0,0,1	1/1:20,0:21:14.71:127,15,0	1/1:14,0:14:5.55:43,6,0	0/1:21,0:21:14.07:226,0,14	1/1:19,0:18:19:131,19,0	1/1:16,0:33:68.69:555,69,0	1/1:22,0:22:23.61:190,24,0	1/1:27,0:32:16.06:107,16,0	1/1:16,0:16:14.85:94,15,0	1/1:24,0:27:11.81:91,12,0	0/1:3,0:15:0.12:0,0,0	1/1:13,0:13:4.72:17,5,0	1/1:13,0:13:10.50:71,11,0	1/1:15,0:15:17.93:146,18,0	1/1:22,0:22:28.97:239,29,0	1/1:25,0:24:22.79:179,23,0	1/1:15,0:13:8.98:73,9,0	1/1:25,0:27:10.87:93,11,0	1/1:20,0:20:3.48:41,3,0	1/1:10,0:12:4.78:25,5,0	1/1:26,0:26:21.99:190,22,0	1/1:13,15:28:47.89:407,48,0	1/1:34,0:34:41.79:298,42,0	1/1:4,7:10:6.02:93,6,0
chr10	27151025	.	C	CTCTCTC	4086.96	PASS	AB=1.000;AC=40;AF=0.714;AN=56;BaseQRankSum=-2.660;DP=608;FS=12.855;HRun=0;HaplotypeScore=182.6999;InbreedingCoeff=0.4038;MQ=48.46;MQ0=15;MQRankSum=2.222;QD=9.02;ReadPosRankSum=2.789;VQSLOD=1.9971;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:4.12:0,4,65	0/0:18,0:18:11.75:0,12,85	0/0:23,0:5:6.02:0,6,86	0/0:31,0:11:12.07:0,12,144	0/0:34,0:34:2.61:0,3,4	1/1:27,0:26:17.65:382,18,0	1/1:17,0:17:6.44:70,6,0	0/1:24,0:24:18.44:18,0,171	1/1:21,0:19:14.95:166,15,0	1/1:29,0:29:53.58:561,54,0	1/1:25,0:25:18.29:188,18,0	1/1:30,0:29:14.60:262,15,0	1/1:19,0:18:14.90:278,15,0	1/1:27,0:27:13.85:300,14,0	0/0:20,0:20:1.72:0,2,4	1/1:17,0:17:2.04:6,2,0	0/1:11,0:10:16.50:53,0,16	0/1:13,0:12:5.10:62,0,5	1/1:16,0:16:16.91:254,17,0	0/1:23,0:22:19.14:179,0,19	1/1:11,0:9:8.96:69,9,0	1/1:24,0:24:9.30:221,9,0	1/1:18,0:18:3.01:65,3,0	1/1:14,0:14:6.02:101,6,0	1/1:15,6:24:20.87:161,21,0	1/1:23,0:23:38.73:395,39,0	1/1:30,0:30:16.17:277,16,0	1/1:10,0:8:2.22:19,2,0
chr10	27151029	.	C	CTGTGTG	2526.58	PASS	AB=1.000;AC=32;AF=0.615;AN=52;BaseQRankSum=-1.506;DP=607;FS=5.396;HRun=0;HaplotypeScore=192.6820;InbreedingCoeff=0.5520;MQ=46.75;MQ0=17;MQRankSum=-0.391;QD=6.98;ReadPosRankSum=0.448;VQSLOD=2.2131;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:29,1:27:3.97:133,4,0	1/1:21,0:21:15.03:287,15,0	./.	./.	1/1:34,0:34:13.79:238,14,0	0/0:27,0:26:17.97:0,18,303	0/0:18,0:18:1.27:0,1,57	1/1:25,0:25:14.98:177,15,0	1/1:17,4:19:6.02:129,6,0	1/1:29,1:30:2.32:265,2,0	0/0:26,0:27:1.80:0,2,4	0/0:29,0:28:17.08:0,17,346	0/0:19,0:19:15.06:0,15,188	0/0:26,0:26:13.16:0,13,227	1/1:22,0:22:6.29:113,6,0	1/1:7,0:15:2.80:59,3,0	1/1:12,0:11:5.81:84,6,0	0/1:14,0:13:26.91:27,0,33	1/1:16,0:16:8.97:89,9,0	1/1:22,1:22:11.90:226,12,0	1/1:12,0:8:3.01:72,3,0	0/0:24,0:24:19.40:0,19,269	0/0:17,0:17:5.51:0,6,69	0/0:13,0:13:10.95:0,11,167	1/1:21,2:23:8.52:97,9,0	1/1:25,0:25:24.03:428,24,0	1/1:20,8:30:8.95:238,9,0	0/1:9,0:7:18.63:40,0,19
chr10	27151052	.	T	TGTGT	1905.61	PASS	AB=1.000;AC=36;AF=0.667;AN=54;BaseQRankSum=-1.295;DP=566;FS=1.348;HRun=0;HaplotypeScore=145.2600;InbreedingCoeff=0.5269;MQ=47.69;MQ0=18;MQRankSum=-1.826;QD=4.86;ReadPosRankSum=0.887;VQSLOD=2.7996;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:24:5.47:96,5,0	1/1:22,0:22:15.50:200,16,0	./.	0/1:21,0:14:0:0,0,0	1/1:31,0:31:11.05:189,11,0	0/0:25,0:24:19.80:0,20,240	0/0:19,0:19:3.01:0,3,45	1/1:23,0:23:3.06:8,3,0	1/1:21,0:19:5.87:92,6,0	1/1:28,0:28:16.76:244,17,0	0/0:10,9:20:0.24:0,0,1	0/0:27,0:26:21.35:0,21,268	0/1:18,0:18:0.12:0,0,129	0/0:22,0:22:12.71:0,13,163	1/1:20,0:20:8.58:117,9,0	1/1:16,0:16:3.01:54,3,0	1/1:15,0:14:5.81:61,6,0	1/1:14,0:13:3.72:56,4,0	1/1:12,0:12:6.49:106,6,0	1/1:17,0:16:12.04:178,12,0	1/1:13,0:9:3.01:48,3,0	0/0:25,0:25:15.24:0,15,176	0/1:16,0:16:8.59:9,0,39	0/0:17,0:17:12:0,12,136	1/1:21,0:21:9.03:146,9,0	1/1:25,0:25:19.77:271,20,0	1/1:23,0:23:9.02:157,9,0	0/1:8,0:6:4.97:40,0,5
chr10	27152585	.	ATCTCTCTCTCTCTC	A	432.08	PASS	AB=0.911;AC=6;AF=0.111;AN=54;BaseQRankSum=3.877;DP=621;FS=15.118;HRun=0;HaplotypeScore=199.8887;InbreedingCoeff=0.4232;MQ=69.64;MQ0=22;MQRankSum=-0.169;QD=3.38;ReadPosRankSum=-2.626;VQSLOD=1.4024;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:24.08:0,24,814	1/1:9,0:9:2.88:66,3,0	0/0:58,0:26:3.59:0,4,10	0/1:69,0:21:3.28:3,0,19	0/0:21,0:20:13.83:0,14,150	0/0:24,0:23:15.03:0,15,408	0/0:15,0:13:12:0,12,374	0/1:29,8:36:99:273,0,118	0/0:15,0:15:18.95:0,19,518	0/0:18,0:18:30.10:0,30,958	0/0:15,0:15:6.01:0,6,179	0/0:18,0:18:15.05:0,15,558	0/0:15,0:15:24.07:0,24,644	0/0:19,0:19:18.03:0,18,423	0/0:19,0:20:24.04:0,24,403	0/0:17,0:16:17.89:0,18,497	1/1:12,1:11:6.02:200,6,0	0/0:18,0:14:26.98:0,27,621	0/0:23,0:23:21.05:0,21,616	0/0:25,0:25:14.65:0,15,271	0/0:26,0:24:11.35:0,11,491	0/0:22,0:21:20.65:0,21,569	0/0:29,0:29:21.45:0,21,551	0/0:8,0:16:8.99:0,9,534	0/0:20,0:20:14.30:0,14,352	0/0:19,0:19:45.14:0,45,1772	0/0:15,0:15:27.01:0,27,544	./.
chr10	27152708	.	A	ATT	7291.11	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-5.617;DP=502;FS=2.987;HRun=8;HaplotypeScore=88.7533;InbreedingCoeff=0.9745;MQ=61.04;MQ0=11;MQRankSum=0.363;QD=24.38;ReadPosRankSum=-6.295;VQSLOD=2.9950;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:8,16:23:19.88:272,20,0	1/1:1,12:13:18.62:259,19,0	0/0:28,0:15:36.07:0,36,395	0/0:20,0:15:27.34:0,27,286	1/1:8,17:27:57.70:772,58,0	0/0:15,0:14:42.11:0,42,468	0/0:15,0:14:42.11:0,42,466	1/1:5,23:29:75.24:1152,75,0	1/1:5,11:15:20.69:265,21,0	1/1:6,11:16:33.11:514,33,0	1/1:4,10:16:36.91:444,37,0	0/0:19,0:19:43.40:0,43,491	0/0:17,0:17:42.08:0,42,464	0/0:19,0:19:51.13:0,51,566	0/0:15,0:14:42.11:0,42,468	1/1:6,11:17:18.11:249,18,0	1/1:3,13:14:24.08:381,24,0	1/1:7,1:8:8.52:104,9,0	1/1:5,8:14:29.92:421,30,0	1/1:5,17:22:55.77:683,56,0	1/1:3,7:11:9.50:144,10,0	0/0:18,0:18:48.11:0,48,526	0/0:14,0:13:26.19:0,26,299	0/0:23,0:23:49.93:0,50,565	1/1:1,13:14:18.53:278,19,0	1/1:2,19:21:54.18:854,54,0	1/1:4,14:19:17.89:261,18,0	1/1:4,8:12:15.05:238,15,0
chr10	27153308	.	GT	G	9844.83	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=14.635;DP=410;FS=0.824;HRun=1;HaplotypeScore=94.8371;InbreedingCoeff=0.9449;MQ=69.19;MQ0=0;MQRankSum=-5.937;QD=34.79;ReadPosRankSum=1.853;VQSLOD=4.7938;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,8:19:42.08:488,42,0	1/1:12,4:16:45.14:601,45,0	0/0:9,0:9:27.09:0,27,421	0/0:5,0:5:9.03:0,9,144	1/1:26,10:36:99:1273,99,0	0/0:23,0:23:69.22:0,69,1062	0/0:7,0:7:21.07:0,21,336	1/1:2,25:27:81.25:1003,81,0	1/1:6,4:10:30.08:370,30,0	1/1:13,2:15:42.13:569,42,0	1/1:16,10:26:78.23:1009,78,0	0/0:11,0:11:33.10:0,33,497	0/0:17,0:17:51.14:0,51,765	0/0:16,0:16:48.15:0,48,744	0/0:13,0:13:39.12:0,39,592	1/1:5,7:12:36.08:425,36,0	1/1:9,1:10:12.04:167,12,0	1/1:4,2:6:5.81:46,6,0	1/1:2,7:9:27.09:355,27,0	1/1:22,8:30:90.20:1102,90,0	1/1:3,1:4:6.02:72,6,0	0/0:5,0:5:15.05:0,15,240	0/0:17,0:17:51.17:0,51,815	0/0:4,0:4:12.04:0,12,192	1/1:13,6:19:57.17:746,57,0	1/1:13,4:17:51.16:679,51,0	1/1:10,11:21:63.18:783,63,0	1/1:5,1:6:12.04:158,12,0
chr10	27153313	.	A	AT	9937.48	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=15.317;DP=419;FS=1.310;HRun=1;HaplotypeScore=100.1091;InbreedingCoeff=0.9408;MQ=69.72;MQ0=0;MQRankSum=-4.755;QD=33.92;ReadPosRankSum=1.676;VQSLOD=4.6915;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,8:20:42.09:509,42,0	1/1:13,3:16:39.12:539,39,0	0/0:10,0:10:27.08:0,27,331	0/0:4,0:5:6.02:0,6,78	1/1:25,9:34:87.25:1174,87,0	0/0:23,0:23:69.19:0,69,855	0/0:8,0:8:24.08:0,24,311	1/1:5,23:28:78.22:963,78,0	1/1:6,5:11:33.10:429,33,0	1/1:12,3:15:42.14:601,42,0	1/1:19,11:30:84.15:1079,84,0	0/0:11,0:11:27.09:0,27,350	0/0:15,0:15:45.13:0,45,570	0/0:15,0:15:45.13:0,45,568	0/0:12,0:12:36.12:0,36,467	1/1:6,5:11:33.09:408,33,0	1/1:10,0:10:15.02:187,15,0	1/1:4,3:7:8.89:93,9,0	1/1:6,5:10:30.10:398,30,0	1/1:20,7:27:78.18:971,78,0	1/1:2,1:3:3.01:32,3,0	0/0:5,0:5:15.05:0,15,195	0/0:18,0:18:54.15:0,54,674	0/0:4,0:4:12.04:0,12,156	1/1:15,4:19:54.15:712,54,0	1/1:13,5:18:54.16:723,54,0	1/1:14,12:25:69.18:869,69,0	1/1:4,3:7:18.06:251,18,0
chr10	27155224	.	AACAC	A	526.81	PASS	AB=0.857;AC=15;AF=0.357;AN=42;BaseQRankSum=1.924;DP=266;FS=14.892;HRun=0;HaplotypeScore=52.2773;InbreedingCoeff=0.4674;MQ=62.82;MQ0=11;MQRankSum=-1.407;QD=6.67;ReadPosRankSum=0.574;VQSLOD=0.3929;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:11.76:0,12,175	1/1:1,0:3:3:28,3,0	./.	./.	./.	1/1:11,0:12:5.54:44,6,0	1/1:11,0:9:6:60,6,0	./.	0/0:5,0:6:2.74:0,3,12	0/0:4,0:3:3.01:0,3,68	0/0:4,0:4:3.01:0,3,56	0/1:5,1:5:11.67:40,0,12	1/1:1,1:2:3.01:46,3,0	./.	0/0:7,0:6:9.01:0,9,163	0/0:4,0:4:2.97:0,3,20	1/1:15,0:17:9.01:84,9,0	0/0:11,0:9:6.02:0,6,97	0/0:13,0:13:6.01:0,6,84	0/0:3,0:3:3.01:0,3,70	0/0:16,0:16:9:0,9,106	1/1:0,2:2:3.01:46,3,0	./.	1/1:15,10:25:21.07:321,21,0	0/0:14,0:14:11.96:0,12,274	0/0:4,0:4:3:0,3,25	./.	0/0:7,0:7:9.03:0,9,201
chr10	27155403	.	T	TTTATTA	1024.51	PASS	AC=28;AF=0.778;AN=36;BaseQRankSum=-0.302;DP=156;FS=3.192;HRun=0;HaplotypeScore=31.7255;InbreedingCoeff=0.3897;MQ=64.37;MQ0=0;MQRankSum=-2.870;QD=15.07;ReadPosRankSum=-0.680;VQSLOD=1.7562;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,1:6:6.02:187,6,0	0/0:4,0:4:3.01:0,3,60	./.	./.	./.	1/1:4,0:4:3.01:45,3,0	./.	0/0:29,0:29:8.98:0,9,89	1/1:2,1:3:3.01:96,3,0	1/1:3,1:4:3.01:96,3,0	1/1:5,0:5:0.47:1,0,0	1/1:3,0:3:3.01:57,3,0	1/1:1,0:2:3.01:78,3,0	./.	0/0:3,0:5:6.02:0,6,84	./.	0/0:17,0:19:27.06:0,27,467	1/1:1,0:3:3.01:64,3,0	./.	1/1:3,0:4:3.01:78,3,0	./.	./.	1/1:4,0:5:2.94:18,3,0	./.	1/1:7,4:13:5.95:114,6,0	1/1:4,1:5:3.01:96,3,0	1/1:2,2:4:6.02:192,6,0	1/1:4,0:7:2.94:18,3,0
chr10	27157575	.	T	TAC	4991.23	PASS	AB=0.609;AC=27;AF=0.482;AN=56;BaseQRankSum=-4.126;DP=307;FS=5.776;HRun=0;HaplotypeScore=46.3479;InbreedingCoeff=0.8408;MQ=69.92;MQ0=1;MQRankSum=-0.756;QD=34.19;ReadPosRankSum=4.070;VQSLOD=6.7701;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,7:10:18.06:293,18,0	0/0:11,0:11:30.09:0,30,369	0/0:11,0:9:11.90:0,12,148	0/0:13,0:12:6.02:0,6,74	1/1:3,10:13:30.10:462,30,0	0/0:14,0:14:30.07:0,30,343	0/0:5,0:5:9.03:0,9,111	0/0:43,0:43:90.26:0,90,1077	1/1:2,5:7:15.05:245,15,0	0/1:5,9:14:34.74:459,0,35	1/1:3,8:11:27.09:439,27,0	0/0:9,0:9:18.06:0,18,221	0/0:10,0:10:21.07:0,21,258	0/0:6,0:6:18.06:0,18,221	0/0:6,0:6:15.03:0,15,172	1/1:5,2:7:6.02:98,6,0	0/0:18,0:18:21.59:0,22,458	1/1:3,4:7:12.04:196,12,0	1/1:2,8:11:30.09:461,30,0	1/1:2,7:9:15.05:245,15,0	1/1:3,1:4:6.02:86,6,0	0/0:4,0:4:9.03:0,9,111	0/0:5,0:5:15.05:0,15,185	0/0:6,0:6:12:0,12,131	1/1:1,8:9:27.09:435,27,0	1/1:5,8:13:30.10:474,30,0	1/1:8,12:20:14.51:560,15,0	1/1:0,11:11:33.11:538,33,0
chr10	27157625	.	ATATG	A	6315.86	PASS	AC=40;AF=0.769;AN=52;BaseQRankSum=1.040;DP=219;FS=1.239;HRun=0;HaplotypeScore=57.2917;InbreedingCoeff=0.7314;MQ=57.15;MQ0=0;MQRankSum=-5.075;QD=46.44;ReadPosRankSum=1.429;VQSLOD=4.9962;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,8:8:15.05:264,15,0	0/0:6,0:6:15.05:0,15,258	0/0:4,0:3:3.01:0,3,81	0/0:1,0:1:0.47:0,0,1	1/1:1,8:9:27.02:472,27,0	1/1:0,14:14:39.13:739,39,0	1/1:0,5:5:15.05:281,15,0	0/0:52,0:52:40.01:0,40,1668	1/1:0,5:5:15.05:284,15,0	1/1:0,9:9:27.08:481,27,0	1/1:2,1:3:6.02:100,6,0	./.	1/1:0,5:5:8.89:170,9,0	1/1:1,10:11:30.10:541,30,0	0/0:8,0:8:21.06:0,21,471	1/1:0,2:2:6.02:114,6,0	0/0:12,0:12:36.07:0,36,577	1/1:1,6:7:12.02:194,12,0	1/1:1,6:7:21.06:354,21,0	1/1:0,4:4:6.02:114,6,0	1/1:0,2:2:3.01:57,3,0	./.	1/1:1,0:1:2.92:17,3,0	1/1:0,2:2:6.02:114,6,0	1/1:1,13:14:42.13:744,42,0	1/1:0,3:3:9.03:170,9,0	1/1:0,10:10:27.07:476,27,0	1/1:2,13:15:42.05:630,42,0
chr10	27158788	.	A	AT	14724.15	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-11.563;DP=583;FS=14.348;HRun=7;HaplotypeScore=54.2098;InbreedingCoeff=0.9591;MQ=71.44;MQ0=0;MQRankSum=-2.580;QD=31.33;ReadPosRankSum=2.394;VQSLOD=3.7319;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,24:28:72.22:870,72,0	0/0:5,0:5:15.02:0,15,145	0/0:14,0:13:26.93:0,27,243	0/0:13,0:12:16.61:0,17,210	1/1:1,33:34:96.21:1127,96,0	1/1:4,20:24:60.18:725,60,0	1/1:3,18:21:45.14:544,45,0	0/0:32,0:32:81.10:0,81,775	1/1:0,16:16:48.15:580,48,0	1/1:1,25:26:75.20:891,75,0	1/1:2,15:17:48.10:561,48,0	1/1:2,12:14:36.11:435,36,0	1/1:1,18:19:51.16:616,51,0	1/1:2,25:27:66.20:797,66,0	0/0:25,0:25:63.08:0,63,603	1/1:3,16:19:47.82:555,48,0	0/0:24,0:24:63.10:0,63,608	1/1:2,17:19:46.63:577,47,0	1/1:4,15:19:48.12:558,48,0	1/1:1,31:32:90.23:1071,90,0	1/1:3,23:26:66.20:797,66,0	1/1:2,17:19:54.12:635,54,0	1/1:1,13:14:33.10:399,33,0	1/1:0,8:8:24.07:290,24,0	1/1:3,27:29:75.23:906,75,0	1/1:3,28:32:87.13:1029,87,0	1/1:2,23:25:60.18:725,60,0	1/1:0,1:1:3.01:36,3,0
chr10	27159417	.	GAAATGGTATTGTCC	G	2664.53	PASS	AC=24;AF=0.667;AN=36;BaseQRankSum=2.613;DP=173;FS=56.489;HRun=0;HaplotypeScore=102.9636;InbreedingCoeff=0.6569;MQ=97.47;MQ0=1;MQRankSum=-7.138;QD=57.92;ReadPosRankSum=1.800;VQSLOD=1.1334;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	0/0:14,0:14:42.14:0,42,2482	0/0:20,0:17:51.16:0,51,2661	0/0:21,0:21:55.14:0,55,3375	./.	1/1:0,3:3:3.01:130,3,0	./.	0/0:23,0:21:57.19:0,57,3043	1/1:0,1:1:3.01:126,3,0	1/1:2,5:6:15.05:649,15,0	1/1:1,2:3:6.02:194,6,0	./.	1/1:2,2:3:3.01:130,3,0	1/1:3,1:4:3.01:97,3,0	0/0:32,0:32:84.29:0,84,5279	1/1:2,1:3:3.01:130,3,0	0/0:9,0:9:27.09:0,27,1746	./.	./.	1/1:1,2:3:3.01:96,3,0	./.	1/1:1,1:2:3.01:130,3,0	1/1:1,4:5:12.04:413,12,0	./.	1/1:1,1:2:2.74:99,3,0	./.	1/1:3,6:9:15.05:616,15,0	./.
chr10	27159458	.	C	CTT	3350.65	PASS	AC=16;AF=0.800;AN=20;BaseQRankSum=-3.757;DP=251;FS=1.004;HRun=0;HaplotypeScore=29.9184;InbreedingCoeff=0.7186;MQ=63.36;MQ0=98;MQRankSum=-0.745;QD=31.91;ReadPosRankSum=5.447;VQSLOD=4.9746;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	1/1:0,14:11:33.11:670,33,0	0/0:16,0:13:39.13:0,39,602	0/0:22,0:23:63.17:0,63,941	1/1:1,12:3:3.01:37,3,0	./.	./.	1/1:0,11:10:30.10:594,30,0	1/1:0,5:1:3.01:61,3,0	1/1:5,8:7:12.04:225,12,0	./.	./.	./.	./.	1/1:2,28:24:60.21:1217,60,0	./.	1/1:1,8:9:24.08:487,24,0	./.	./.	./.	./.	./.	./.	./.	./.	./.	1/1:6,4:2:3.01:61,3,0	./.
chr10	27159949	.	A	AT	336.33	PASS	AC=14;AF=0.318;AN=44;BaseQRankSum=6.880;DP=488;FS=36.453;HRun=0;HaplotypeScore=24.3792;InbreedingCoeff=0.7117;MQ=25.15;MQ0=155;MQRankSum=1.429;QD=3.47;ReadPosRankSum=0.979;VQSLOD=0.8888;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:13:8.99:0,9,104	0/0:9,0:5:6.02:0,6,84	./.	./.	./.	1/1:16,3:14:19.63:128,20,0	1/1:14,2:11:10.88:61,11,0	0/0:33,0:17:48.15:0,48,652	0/0:20,0:13:8.99:0,9,102	0/0:20,0:18:54.14:0,54,717	0/0:24,0:17:2.97:0,3,20	1/1:9,0:6:6.01:64,6,0	1/1:19,2:16:17.11:126,17,0	1/1:12,1:9:8.28:54,8,0	0/0:11,0:5:9.03:0,9,126	0/0:12,0:6:2.97:0,3,20	0/0:17,0:16:27.06:0,27,358	0/0:4,0:2:3.01:0,3,42	0/0:16,0:4:9.03:0,9,126	./.	0/0:15,0:11:12.04:0,12,168	./.	1/1:7,0:6:2.74:12,3,0	1/1:9,3:11:7.70:48,8,0	./.	0/0:28,0:17:51.10:0,51,655	0/0:24,0:13:8.82:0,9,61	0/0:21,0:16:9.03:0,9,126
chr10	27159951	.	TC	T	342.56	PASS	AC=14;AF=0.304;AN=46;BaseQRankSum=6.830;DP=493;FS=4.272;HRun=1;HaplotypeScore=25.4019;InbreedingCoeff=0.7381;MQ=25.94;MQ0=148;MQRankSum=2.598;QD=3.46;ReadPosRankSum=-1.009;VQSLOD=-0.2515;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:13:9.03:0,9,143	0/0:9,0:5:6.02:0,6,96	./.	./.	./.	1/1:17,3:15:22.23:131,22,0	1/1:14,2:11:6.48:17,6,0	0/0:32,0:16:48.16:0,48,761	0/0:21,0:14:12.04:0,12,178	0/0:21,0:19:54.18:0,54,861	0/0:24,0:17:6.02:0,6,83	1/1:9,0:6:8.97:73,9,0	1/1:20,2:17:18.86:132,19,0	1/1:12,1:9:9.34:56,9,0	0/0:11,0:6:12.04:0,12,188	0/0:12,0:6:3.01:0,3,47	0/0:17,0:16:27.09:0,27,431	0/0:4,0:2:3.01:0,3,48	0/0:15,0:4:12.04:0,12,182	0/0:28,0:23:2.97:0,3,20	0/0:15,0:11:15.05:0,15,237	./.	1/1:7,0:6:5.01:27,5,0	1/1:9,3:12:11.41:71,11,0	./.	0/0:29,0:18:54.18:0,54,841	0/0:23,0:14:9.03:0,9,142	0/0:21,0:16:9.03:0,9,144
chr10	27160071	.	CT	C	1593.25	PASS	AC=18;AF=0.643;AN=28;BaseQRankSum=4.432;DP=161;FS=0.757;HRun=8;HaplotypeScore=25.8928;InbreedingCoeff=0.9516;MQ=96.67;MQ0=1;MQRankSum=-4.139;QD=20.17;ReadPosRankSum=2.641;VQSLOD=2.6673;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	0/0:4,0:4:12.04:0,12,145	0/0:16,0:16:27.02:0,27,299	0/0:10,0:8:13.85:0,14,146	./.	1/1:0,13:13:36.06:347,36,0	1/1:0,7:7:12.02:116,12,0	0/0:25,0:25:60.18:0,60,714	./.	./.	./.	1/1:2,4:6:12.02:116,12,0	1/1:0,11:11:30.05:289,30,0	1/1:0,8:8:18.03:174,18,0	1/1:2,7:9:21.03:202,21,0	./.	0/0:15,0:15:33.10:0,33,398	./.	./.	./.	./.	1/1:1,6:7:15.02:144,15,0	1/1:2,6:8:15.02:145,15,0	1/1:2,8:10:21.03:203,21,0	./.	./.	./.	./.
chr10	27160299	.	T	TG	602.73	PASS	AB=1.000;AC=15;AF=0.625;AN=24;BaseQRankSum=4.592;DP=97;FS=19.267;HRun=1;HaplotypeScore=100.5170;InbreedingCoeff=0.5519;MQ=84.70;MQ0=0;MQRankSum=-5.856;QD=16.29;ReadPosRankSum=1.738;VQSLOD=2.6693;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	1/1:2,0:2:6:52,6,0	0/0:17,0:16:36.08:0,36,432	0/0:14,0:14:4.12:0,4,390	./.	1/1:3,0:3:8.97:76,9,0	0/1:7,0:7:12.36:131,0,12	1/1:9,0:9:22.81:168,23,0	./.	./.	./.	1/1:5,0:5:10.17:72,10,0	1/1:4,0:4:6.48:59,6,0	0/0:4,0:4:1.16:0,1,7	0/0:21,0:21:60.20:0,60,778	./.	./.	./.	./.	./.	./.	1/1:2,2:4:9.02:98,9,0	1/1:3,0:2:6.01:61,6,0	./.	./.	./.	./.	./.
chr10	27160566	.	AT	A	958.54	PASS	AB=0.667;AC=15;AF=0.278;AN=54;BaseQRankSum=-5.521;DP=234;FS=2.603;HRun=1;HaplotypeScore=82.7295;InbreedingCoeff=0.5037;MQ=54.13;MQ0=10;MQRankSum=-0.547;QD=9.59;ReadPosRankSum=2.733;VQSLOD=1.5358;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:1,8:9:0:0,0,0	0/0:8,0:8:8.17:0,8,20	0/0:16,0:5:3.08:0,3,22	0/1:29,0:6:0.26:0,0,63	0/1:0,11:11:0.31:0,0,1	0/0:9,0:9:7.09:0,7,19	0/0:5,0:5:2.24:0,2,5	0/0:11,0:11:22.55:0,23,70	0/0:1,7:8:0:0,0,0	1/1:0,9:9:27.08:322,27,0	0/1:0,15:15:0.19:0,0,1	0/0:6,0:6:4.79:0,5,10	0/0:9,0:9:6.10:0,6,29	0/0:7,0:7:5.73:0,6,13	./.	0/0:0,4:4:0:0,0,0	0/0:3,0:3:2.44:0,2,7	1/1:0,3:3:6.02:70,6,0	1/1:0,2:2:6.02:73,6,0	1/1:0,10:10:2.65:33,3,0	0/0:0,5:5:0:0,0,0	0/0:8,0:8:8.92:0,9,63	0/0:8,0:8:5.91:0,6,28	0/0:6,0:6:0.47:0,0,1	0/0:0,9:9:0:0,0,0	1/1:0,10:10:30.09:349,30,0	1/1:0,11:11:20.63:246,21,0	0/0:0,3:3:0:0,0,0
chr10	27160573	.	TAGCA	T	8255.02	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-0.011;DP=276;FS=59.279;HRun=0;HaplotypeScore=70.0789;InbreedingCoeff=0.6720;MQ=58.48;MQ0=7;MQRankSum=-4.970;QD=35.89;ReadPosRankSum=5.199;VQSLOD=2.5800;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,11:11:20.66:360,21,0	1/1:9,0:9:24.08:414,24,0	0/0:18,0:9:18.92:0,19,392	0/0:27,0:8:2.67:0,3,205	1/1:0,11:11:21.54:344,22,0	1/1:10,0:10:24.08:411,24,0	1/1:8,0:8:9.03:151,9,0	1/1:16,0:16:33.11:586,33,0	1/1:0,9:9:24.08:412,24,0	1/1:0,10:10:30.10:556,30,0	1/1:0,17:17:30.32:495,30,0	1/1:8,0:8:15.05:254,15,0	1/1:10,0:10:11.97:204,12,0	1/1:10,0:10:21.07:353,21,0	0/0:1,0:1:3.01:0,3,74	1/1:0,7:7:15.05:261,15,0	1/1:4,0:4:6.02:105,6,0	1/1:1,3:4:9.03:165,9,0	1/1:0,4:4:12.04:227,12,0	1/1:0,14:14:33.11:562,33,0	1/1:0,5:5:15.05:251,15,0	1/1:9,0:9:8.88:59,9,0	1/1:10,0:10:15.47:220,15,0	1/1:9,0:9:2.94:49,3,0	1/1:0,9:9:24.08:417,24,0	1/1:0,10:10:30.10:548,30,0	1/1:0,11:11:33.11:588,33,0	1/1:0,5:5:15.05:265,15,0
chr10	27160574	.	AGCAATG	A	7455.88	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=0.913;DP=277;FS=57.625;HRun=0;HaplotypeScore=80.2899;InbreedingCoeff=0.7569;MQ=58.48;MQ0=7;MQRankSum=-5.339;QD=32.42;ReadPosRankSum=5.237;VQSLOD=1.8427;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:11:20.73:234,21,0	1/1:0,9:9:24.08:558,24,0	0/0:18,0:9:19.15:0,19,480	0/0:26,0:8:10.81:0,11,260	1/1:11,0:11:21.52:224,22,0	1/1:0,10:10:24.08:554,24,0	1/1:0,8:8:8.97:205,9,0	1/1:0,16:16:48.03:924,48,0	1/1:9,0:9:24.07:268,24,0	1/1:10,0:10:30.09:349,30,0	1/1:17,0:17:29.89:321,30,0	1/1:0,8:8:15.05:344,15,0	1/1:0,10:10:12.02:273,12,0	1/1:0,10:10:21.07:479,21,0	0/0:2,0:2:6.02:0,6,197	1/1:7,0:7:15.04:171,15,0	1/1:0,4:4:6.02:141,6,0	1/1:4,0:4:9.03:107,9,0	1/1:4,0:4:12.04:139,12,0	1/1:14,0:14:32.65:363,33,0	1/1:5,0:5:15.04:161,15,0	1/1:0,9:9:9.02:98,9,0	1/1:0,10:10:15.05:300,15,0	1/1:0,9:9:3.01:67,3,0	1/1:9,0:9:24.07:272,24,0	1/1:10,0:10:30.09:350,30,0	1/1:11,0:11:33.10:381,33,0	1/1:5,0:5:15.04:173,15,0
chr10	27162724	.	TG	T	1891.24	PASS	AC=14;AF=0.583;AN=24;BaseQRankSum=-1.762;DP=409;FS=0.000;HRun=2;HaplotypeScore=50.7294;InbreedingCoeff=0.8395;MQ=14.61;MQ0=286;MQRankSum=-0.656;QD=11.26;ReadPosRankSum=1.587;VQSLOD=1.8335;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	0/0:13,0:6:15.05:0,15,224	./.	./.	1/1:14,22:23:30.10:383,30,0	./.	0/0:19,0:1:3.01:0,3,45	./.	./.	1/1:16,9:9:27.09:350,27,0	1/1:15,16:16:27.09:350,27,0	./.	./.	0/0:7,0:2:6.02:0,6,90	./.	./.	./.	./.	./.	1/1:12,13:14:30.10:389,30,0	./.	0/0:24,0:12:33.11:0,33,493	0/0:21,0:9:24.08:0,24,359	./.	1/1:7,9:10:18.06:233,18,0	1/1:9,7:7:21.07:272,21,0	1/1:16,3:4:3.01:39,3,0	./.
chr10	27163607	.	T	TA	3168.97	PASS	AB=0.789;AC=32;AF=0.571;AN=56;BaseQRankSum=-6.249;DP=344;FS=0.000;HRun=11;HaplotypeScore=37.3669;InbreedingCoeff=0.6070;MQ=58.05;MQ0=16;MQRankSum=2.107;QD=13.15;ReadPosRankSum=0.027;VQSLOD=2.6683;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:12,15:24:39.47:375,39,0	1/1:1,6:7:15.03:152,15,0	0/1:5,0:5:1.01:1,0,18	0/0:6,0:6:13.33:0,13,81	1/1:5,11:16:24.05:244,24,0	0/0:10,0:9:23.90:0,24,186	0/1:12,2:14:0.56:1,0,179	1/1:9,5:14:14.86:136,15,0	0/1:5,3:8:11.21:79,0,11	1/1:5,11:15:33.07:335,33,0	0/1:5,3:7:8.21:104,0,8	0/0:9,0:9:17.90:0,18,139	0/0:16,0:15:41.82:0,42,325	0/0:14,0:13:32.85:0,33,255	0/0:9,0:8:14.90:0,15,114	1/1:2,5:8:17.87:167,18,0	1/1:6,6:8:18.04:183,18,0	1/1:3,7:8:0.81:190,1,0	1/1:5,5:11:17.71:151,18,0	1/1:5,9:14:9.41:254,9,0	1/1:6,11:14:24.05:244,24,0	0/0:13,0:13:26.87:0,27,209	0/0:11,0:9:23.90:0,24,186	0/0:15,0:14:29.87:0,30,231	0/1:4,3:6:21.49:21,0,37	1/1:10,15:23:45.07:448,45,0	0/1:7,5:11:5.26:122,0,5	1/1:2,5:8:17.87:167,18,0
chr10	27164931	.	AT	A	13117.20	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-1.400;DP=589;FS=13.512;HRun=9;HaplotypeScore=82.8733;InbreedingCoeff=0.9839;MQ=79.40;MQ0=0;MQRankSum=-6.621;QD=23.68;ReadPosRankSum=4.501;VQSLOD=4.4185;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,14:16:42.02:384,42,0	1/1:0,13:13:36.02:330,36,0	0/0:22,0:23:42.01:0,42,437	0/0:12,0:10:18.05:0,18,208	1/1:3,29:32:75.02:686,75,0	1/1:1,24:25:69.04:632,69,0	1/1:1,6:7:18.01:165,18,0	1/1:4,30:34:90.04:823,90,0	1/1:3,22:25:60.03:549,60,0	1/1:2,19:21:57.03:522,57,0	1/1:2,36:38:99:961,105,0	1/1:1,23:24:66.03:604,66,0	1/1:3,15:18:42.01:384,42,0	1/1:0,15:15:45.02:412,45,0	1/1:0,22:22:66.04:604,66,0	1/1:3,12:15:36.02:330,36,0	1/1:2,22:24:60.03:549,60,0	1/1:1,7:8:18.01:165,18,0	1/1:5,11:16:30.01:275,30,0	1/1:2,30:32:87.04:796,87,0	1/1:0,9:9:24.01:220,24,0	1/1:1,20:21:54.02:494,54,0	1/1:5,24:29:37.42:597,37,0	1/1:1,7:8:21.01:192,21,0	1/1:2,24:26:66.03:604,66,0	1/1:3,23:26:69.03:631,69,0	1/1:3,28:31:81.04:741,81,0	1/1:2,17:19:51.03:467,51,0
chr10	27166317	.	A	AC	8122.37	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-8.815;DP=332;FS=10.719;HRun=6;HaplotypeScore=33.5565;InbreedingCoeff=0.9647;MQ=62.34;MQ0=3;MQRankSum=0.369;QD=34.13;ReadPosRankSum=6.056;VQSLOD=3.0008;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,21:21:57.18:717,57,0	0/0:7,0:7:21.02:0,21,205	0/0:16,0:13:39.04:0,39,377	0/0:14,0:10:20.19:0,20,237	1/1:0,6:6:18.06:226,18,0	1/1:0,11:11:27.09:340,27,0	1/1:0,19:19:51.16:642,51,0	0/0:37,0:36:96.17:0,96,952	1/1:1,6:7:15.05:189,15,0	1/1:0,9:9:27.09:340,27,0	1/1:1,16:17:48.07:583,48,0	1/1:0,6:6:15.05:189,15,0	1/1:2,10:12:33.10:411,33,0	1/1:0,12:12:33.11:415,33,0	0/0:11,0:11:33.08:0,33,337	1/1:1,10:11:30.10:377,30,0	0/0:9,0:9:24.05:0,24,245	1/1:0,6:6:18.06:226,18,0	1/1:1,9:10:27.09:340,27,0	1/1:1,14:15:36.12:453,36,0	1/1:1,9:10:21.07:264,21,0	1/1:1,11:12:36.01:427,36,0	1/1:0,13:13:39.12:490,39,0	1/1:0,11:11:33.11:415,33,0	1/1:0,8:8:24.08:302,24,0	1/1:0,11:11:33.09:401,33,0	1/1:0,8:8:24.08:302,24,0	1/1:1,2:3:6.02:75,6,0
chr10	27168218	.	CA	C	1630.07	PASS	AB=0.571;AC=5;AF=0.089;AN=56;BaseQRankSum=7.959;DP=599;FS=17.814;HRun=1;HaplotypeScore=61.6283;InbreedingCoeff=0.7744;MQ=67.14;MQ0=0;MQRankSum=0.596;QD=34.68;ReadPosRankSum=-2.235;VQSLOD=1.5407;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:69.21:0,69,1078	1/1:0,12:12:33.11:461,33,0	0/0:24,0:22:63.21:0,63,991	0/0:21,0:20:57.09:0,57,766	0/0:31,0:31:93.32:0,93,1483	0/0:30,0:30:87.28:0,87,1363	0/0:15,0:15:45.14:0,45,693	1/1:0,23:23:66.22:922,66,0	0/0:17,0:17:51.17:0,51,813	0/0:22,0:22:66.22:0,66,1033	0/0:27,0:27:78.27:0,78,1247	0/0:19,0:19:57.19:0,57,909	0/0:23,0:23:69.24:0,69,1093	0/0:15,0:15:45.15:0,45,717	0/0:22,0:22:66.23:0,66,1053	0/0:17,0:17:51.16:0,51,792	0/1:3,9:12:30.43:376,0,30	0/0:21,0:21:63.18:0,63,971	0/0:21,0:21:63.20:0,63,985	0/0:40,0:40:99:0,120,1914	0/0:22,0:22:66.23:0,66,1053	0/0:28,0:28:84.29:0,84,1340	0/0:30,0:30:87.28:0,87,1364	0/0:8,0:8:24.08:0,24,384	0/0:20,0:20:60.20:0,60,956	0/0:22,0:22:66.21:0,66,1031	0/0:27,0:27:81.28:0,81,1290	0/0:5,0:5:15.05:0,15,240
chr10	27168356	.	C	CT	15693.97	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-11.505;DP=634;FS=1.057;HRun=8;HaplotypeScore=60.5176;InbreedingCoeff=0.9878;MQ=69.09;MQ0=0;MQRankSum=-2.081;QD=28.13;ReadPosRankSum=3.225;VQSLOD=5.3529;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,13:16:39.12:450,39,0	1/1:0,5:5:12.04:138,12,0	0/0:23,0:21:48.01:0,48,436	0/0:22,0:21:22.71:0,23,310	1/1:4,30:34:78.11:856,78,0	1/1:4,24:28:66.20:762,66,0	1/1:6,15:21:33.10:381,33,0	1/1:4,18:22:54.15:613,54,0	1/1:2,22:24:63.19:727,63,0	1/1:4,25:29:78.23:899,78,0	1/1:2,18:20:51.15:588,51,0	1/1:4,25:29:66.20:762,66,0	1/1:3,17:20:48.14:554,48,0	1/1:1,15:16:42.12:485,42,0	0/0:3,0:31:57.03:0,57,168	1/1:0,25:25:72.21:831,72,0	1/1:1,22:23:60.18:691,60,0	1/1:1,14:16:35.94:395,36,0	1/1:3,19:22:51.15:637,51,0	1/1:1,27:28:75.18:851,75,0	1/1:3,12:15:36.11:415,36,0	1/1:3,20:23:60.18:688,60,0	1/1:3,23:27:35.64:630,36,0	1/1:2,16:18:48.14:554,48,0	1/1:1,23:24:35.73:665,36,0	1/1:6,21:27:63.15:703,63,0	1/1:1,29:30:78.23:900,78,0	1/1:0,16:16:45.13:519,45,0
chr10	27169667	.	G	GT	1976.21	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-7.504;DP=481;FS=0.555;HRun=1;HaplotypeScore=44.4630;InbreedingCoeff=0.9672;MQ=71.50;MQ0=0;MQRankSum=-1.060;QD=35.93;ReadPosRankSum=-3.205;VQSLOD=2.4539;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:3,0:3:9.02:0,9,105	1/1:0,8:8:24.08:359,24,0	0/0:9,0:9:24.08:0,24,307	0/0:6,0:6:14.86:0,15,138	0/0:28,0:28:84.23:0,84,1058	0/0:17,0:17:48.16:0,48,623	0/0:14,0:14:42.11:0,42,516	1/1:1,34:35:99:1469,102,0	0/0:7,0:7:21.06:0,21,258	0/0:25,0:25:66.19:0,66,823	0/0:25,0:25:66.18:0,66,817	0/0:10,0:10:27.07:0,27,336	0/0:19,0:19:54.18:0,54,700	0/0:21,0:21:63.18:0,63,779	0/0:11,0:11:33.11:0,33,428	0/0:18,0:18:54.18:0,54,701	1/1:0,12:12:21.03:289,21,0	0/0:9,0:9:27.09:0,27,350	0/0:16,0:16:48.14:0,48,599	0/0:34,0:34:99:0,102,1297	0/0:10,0:10:30.08:0,30,375	0/0:16,0:16:48.15:0,48,611	0/0:30,0:30:87.19:0,87,1093	0/0:10,0:10:24.06:0,24,295	0/0:25,0:25:75.18:0,75,904	0/0:25,0:25:75.20:0,75,923	0/0:29,0:29:83.92:0,84,1046	0/0:9,0:9:24.08:0,24,311
chr10	27169791	.	CA	C	10738.85	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-0.908;DP=518;FS=0.948;HRun=8;HaplotypeScore=57.1697;InbreedingCoeff=0.9855;MQ=69.91;MQ0=0;MQRankSum=-0.863;QD=25.33;ReadPosRankSum=3.392;VQSLOD=5.5795;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,9:11:24.04:232,24,0	0/0:12,1:13:10.10:0,10,389	0/0:14,0:14:29.95:0,30,354	0/0:5,0:5:15.01:0,15,162	1/1:0,27:27:66.09:637,66,0	1/1:1,15:16:45.07:435,45,0	1/1:1,12:13:36.06:348,36,0	0/0:33,0:32:81.18:0,81,961	1/1:1,18:19:54.09:522,54,0	1/1:2,31:33:93.14:897,93,0	1/1:2,20:22:57.09:550,57,0	1/1:0,20:20:57.09:550,57,0	1/1:1,22:23:60.10:579,60,0	1/1:2,12:14:30.05:290,30,0	0/0:18,0:18:45.14:0,45,544	1/1:0,15:15:45.07:435,45,0	0/0:11,0:11:30.09:0,30,362	1/1:0,14:14:33.02:310,33,0	1/1:3,13:16:39.06:377,39,0	1/1:2,24:26:72.11:695,72,0	1/1:1,16:17:42.07:406,42,0	1/1:2,18:20:54.09:521,54,0	1/1:2,16:18:39.06:377,39,0	1/1:0,10:10:21.03:203,21,0	1/1:1,28:29:78.12:753,78,0	1/1:2,22:24:66.11:637,66,0	1/1:3,23:26:69.11:666,69,0	1/1:0,11:11:33.05:319,33,0
chr10	27169882	.	TAC	T	2343.78	PASS	AB=0.902;AC=30;AF=0.577;AN=52;BaseQRankSum=-5.082;DP=532;FS=0.663;HRun=0;HaplotypeScore=100.6192;InbreedingCoeff=0.4418;MQ=57.32;MQ0=8;MQRankSum=0.871;QD=7.32;ReadPosRankSum=0.830;VQSLOD=3.3690;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,1:12:5.19:40,5,0	1/1:4,0:7:8.52:42,9,0	./.	./.	1/1:25,4:30:23.55:210,24,0	0/0:22,0:22:8.70:0,9,74	0/0:18,0:18:3.97:0,4,30	0/0:25,0:24:1.82:0,2,5	1/1:20,4:23:29.96:308,30,0	0/1:11,0:10:7.65:8,0,22	1/1:20,4:24:27.90:223,28,0	0/1:21,0:21:6.39:6,0,29	0/0:15,0:16:11.48:0,11,78	0/0:16,0:15:9.75:0,10,106	0/1:19,1:23:48.97:49,0,91	1/1:15,6:21:38.51:351,39,0	1/1:8,0:16:11.52:67,12,0	0/1:11,5:16:2.42:132,0,2	1/1:11,1:11:3:33,3,0	1/1:12,2:14:9.44:174,9,0	1/1:29,4:32:31.97:262,32,0	0/0:10,0:10:14.90:0,15,119	0/0:25,0:23:19.35:0,19,136	0/0:23,0:24:9.13:0,9,83	1/1:9,9:19:29.38:274,29,0	0/1:10,1:11:3.81:55,0,4	0/1:19,3:22:18.71:187,0,19	1/1:0,4:4:9.02:99,9,0
chr10	27170563	.	TA	T	9871.72	PASS	AB=1.000;AC=51;AF=0.911;AN=56;BaseQRankSum=5.201;DP=519;FS=7.027;HRun=9;HaplotypeScore=80.7298;InbreedingCoeff=0.7622;MQ=70.21;MQ0=0;MQRankSum=-1.425;QD=20.19;ReadPosRankSum=2.104;VQSLOD=5.4371;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,20:21:51.11:489,51,0	1/1:1,0:12:22.41:66,22,0	0/1:8,0:8:11.80:12,0,59	0/0:10,0:9:16.82:0,17,181	1/1:2,33:35:96.05:879,96,0	1/1:2,23:25:60.03:549,60,0	1/1:1,13:14:30.02:275,30,0	1/1:2,0:23:36.53:121,37,0	1/1:1,12:13:36.01:329,36,0	1/1:2,15:17:44.95:397,45,0	1/1:1,27:28:46.42:679,46,0	1/1:0,15:15:42.02:384,42,0	1/1:5,18:23:47.98:439,48,0	1/1:2,18:20:48.02:439,48,0	0/0:20,0:20:60.18:0,60,692	1/1:3,14:17:42.01:384,42,0	1/1:2,0:25:38.70:114,39,0	1/1:1,11:12:30.02:274,30,0	1/1:5,12:17:36.01:330,36,0	1/1:1,23:24:59.94:539,60,0	1/1:1,10:11:30.02:275,30,0	1/1:2,14:16:39.01:357,39,0	1/1:3,18:21:7.40:322,7,0	1/1:0,14:14:39.02:357,39,0	1/1:1,16:17:48.03:439,48,0	1/1:1,16:17:41.99:379,42,0	1/1:2,30:32:81.04:741,81,0	1/1:0,12:12:33.02:302,33,0
chr10	27171095	.	T	TGGGAGGGA	1110.13	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-2.177;DP=434;FS=5.778;HRun=0;HaplotypeScore=109.6398;InbreedingCoeff=0.8947;MQ=80.02;MQ0=0;MQRankSum=-3.730;QD=32.65;ReadPosRankSum=-1.896;VQSLOD=2.6094;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:57.18:0,57,1390	1/1:2,5:8:12.04:503,12,0	0/0:22,0:21:42:0,42,870	0/0:23,0:22:27.89:0,28,570	0/0:21,0:21:54.19:0,54,1398	0/0:13,0:13:36.12:0,36,943	0/0:20,0:20:42.12:0,42,884	1/1:10,2:16:18.05:359,18,0	0/0:13,0:13:33.10:0,33,799	0/0:21,0:21:57.19:0,57,1391	0/0:12,0:12:33.10:0,33,811	0/0:18,0:18:42.14:0,42,1062	0/0:15,0:15:30.09:0,30,732	0/0:19,0:19:42.14:0,42,1100	0/0:16,0:16:36.11:0,36,891	0/0:11,0:11:18.06:0,18,472	1/1:6,4:10:9.03:379,9,0	0/0:4,0:4:9.02:0,9,173	0/0:5,0:5:6.01:0,6,106	0/0:25,0:25:63.20:0,63,1509	0/0:20,0:20:48.15:0,48,1204	0/0:17,0:17:42.13:0,42,988	0/0:16,0:16:33.11:0,33,864	0/0:11,0:11:33.11:0,33,836	0/0:15,0:15:30.10:0,30,760	0/0:16,0:16:42.14:0,42,1065	0/0:16,0:16:24.08:0,24,611	0/0:5,0:5:12.04:0,12,283
chr10	27171620	.	TTAC	T	22789.92	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=3.338;DP=614;FS=8.303;HRun=0;HaplotypeScore=98.8416;InbreedingCoeff=0.9202;MQ=86.77;MQ0=0;MQRankSum=-9.964;QD=42.05;ReadPosRankSum=4.096;VQSLOD=6.3114;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,17:19:48.16:784,48,0	1/1:0,9:9:27.09:441,27,0	0/0:20,0:20:54.17:0,54,1061	0/0:26,0:26:68.72:0,69,1339	1/1:1,31:32:84.29:1353,84,0	1/1:1,32:33:87.29:1375,87,0	1/1:1,14:15:30.10:490,30,0	1/1:2,34:36:99:1554,102,0	1/1:3,13:16:39.13:624,39,0	1/1:2,30:32:90.26:1367,90,0	1/1:0,19:19:51.13:757,51,0	1/1:0,12:12:33.11:525,33,0	1/1:0,19:19:48.16:784,48,0	1/1:0,25:25:66.22:1044,66,0	0/0:26,0:26:75.24:0,75,1591	1/1:1,22:23:57.19:922,57,0	1/1:0,8:8:21.07:343,21,0	1/1:0,1:1:3.01:49,3,0	1/1:2,18:20:54.18:868,54,0	1/1:2,30:32:90.31:1436,90,0	1/1:0,27:27:72.24:1146,72,0	1/1:2,18:20:54.18:868,54,0	1/1:1,28:29:78.02:1247,78,0	1/1:0,21:21:54.18:882,54,0	1/1:2,23:25:66.23:1078,66,0	1/1:1,34:35:99:1589,102,0	1/1:0,27:27:69.24:1117,69,0	1/1:0,7:7:9.03:147,9,0
chr10	27171995	.	C	CT	15058.84	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=9.994;DP=555;FS=8.659;HRun=1;HaplotypeScore=161.6576;InbreedingCoeff=0.9668;MQ=73.38;MQ0=0;MQRankSum=-8.842;QD=30.24;ReadPosRankSum=4.215;VQSLOD=3.8071;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,11:13:19.72:421,20,0	1/1:0,6:6:18.05:208,18,0	0/0:15,0:15:44.90:0,45,540	0/0:19,0:19:48.15:0,48,620	1/1:5,33:38:87.86:1008,88,0	1/1:3,22:25:75.05:747,75,0	1/1:6,11:17:42.01:427,42,0	1/1:7,15:22:50.15:611,50,0	1/1:0,23:23:60.17:707,60,0	1/1:4,19:23:69.21:862,69,0	1/1:1,15:16:45.12:528,45,0	1/1:2,13:15:39.10:433,39,0	1/1:1,15:16:45.06:469,45,0	1/1:2,19:21:51.97:604,52,0	0/0:23,0:23:69.22:0,69,896	1/1:5,19:24:54.97:701,55,0	1/1:2,4:6:18.04:205,18,0	1/1:1,2:3:9.01:94,9,0	1/1:2,11:13:39.12:491,39,0	1/1:2,27:29:84.08:993,84,0	1/1:2,26:28:81.24:973,81,0	1/1:3,28:31:79:869,79,0	1/1:7,15:22:45.10:462,45,0	1/1:1,10:11:18.57:210,19,0	1/1:5,18:23:38:625,38,0	1/1:5,25:30:84.23:1040,84,0	1/1:5,32:37:99:1165,99,0	1/1:0,6:6:18.05:207,18,0
chr10	27171997	.	C	CCAG	27156.19	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=9.266;DP=585;FS=2.464;HRun=0;HaplotypeScore=151.2645;InbreedingCoeff=0.9697;MQ=72.77;MQ0=0;MQRankSum=-8.528;QD=51.73;ReadPosRankSum=2.964;VQSLOD=6.4735;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,11:14:36.12:729,36,0	1/1:1,6:7:18.06:353,18,0	0/0:15,0:15:42.14:0,42,700	0/0:20,0:20:54.18:0,54,883	1/1:5,33:38:90.29:1786,90,0	1/1:7,22:29:78.27:1495,78,0	1/1:4,11:15:39.13:728,39,0	1/1:11,15:26:66.18:1269,66,0	1/1:7,19:26:69.22:1351,69,0	1/1:5,19:24:63.22:1291,63,0	1/1:1,14:16:45.15:895,45,0	1/1:5,12:17:45.15:878,45,0	1/1:2,15:17:39.13:719,39,0	1/1:5,19:24:69.24:1316,69,0	0/0:25,0:25:72.23:0,72,1201	1/1:7,19:26:75.24:1413,75,0	1/1:3,4:7:21.03:334,21,0	1/1:2,2:4:9.03:183,9,0	1/1:9,10:19:54.18:1080,54,0	1/1:3,27:31:87.27:1669,87,0	1/1:4,27:31:87.30:1777,87,0	1/1:2,28:30:84.29:1554,84,0	1/1:1,16:17:48.16:904,48,0	1/1:2,10:12:17.93:334,18,0	1/1:10,17:27:75.22:1441,75,0	1/1:4,21:25:66.23:1341,66,0	1/1:6,31:37:99:1962,105,0	1/1:0,6:6:18.06:352,18,0
chr10	27172148	.	G	GAACA	37346.22	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=0.046;DP=665;FS=12.494;HRun=0;HaplotypeScore=102.7090;InbreedingCoeff=0.9669;MQ=73.47;MQ0=6;MQRankSum=-9.033;QD=63.41;ReadPosRankSum=5.782;VQSLOD=6.1770;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,22:25:49.21:1391,49,0	1/1:1,5:6:12.04:328,12,0	0/0:18,0:18:48.15:0,48,868	0/0:25,0:25:72.17:0,72,1240	1/1:2,30:33:75.10:1837,75,0	1/1:1,24:25:60.21:1640,60,0	1/1:0,14:16:33.11:901,33,0	1/1:4,27:36:99:2325,102,0	1/1:1,17:19:48.16:1312,48,0	1/1:1,31:34:99:2467,99,0	1/1:2,22:24:63.04:1531,63,0	1/1:1,20:21:54.19:1476,54,0	1/1:3,18:24:54.19:1465,54,0	1/1:2,34:39:93.32:2543,93,0	0/0:33,0:33:93.31:0,93,1757	1/1:2,31:34:81.23:2154,81,0	1/1:0,12:12:24.08:644,24,0	1/1:1,4:6:12.04:328,12,0	1/1:2,17:19:51.05:1236,51,0	1/1:1,33:33:99:2572,99,0	1/1:3,17:20:45.15:1222,45,0	1/1:1,19:21:45.07:1152,45,0	1/1:1,31:35:81.28:2217,81,0	1/1:0,14:13:30.10:821,30,0	1/1:1,24:27:57.20:1549,57,0	1/1:1,22:25:72.21:1854,72,0	1/1:1,29:31:75.26:2053,75,0	1/1:0,5:5:12.04:329,12,0
chr10	27172569	.	T	TTCTC	31822.63	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-9.069;DP=604;FS=1.295;HRun=0;HaplotypeScore=88.4132;InbreedingCoeff=0.9945;MQ=72.85;MQ0=2;MQRankSum=-5.518;QD=65.08;ReadPosRankSum=6.547;VQSLOD=6.9351;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,22:24:45.15:1177,45,0	0/0:6,0:6:18.06:0,18,349	0/0:20,0:20:43.92:0,44,689	0/0:13,0:13:29.53:0,30,403	1/1:5,24:29:69.24:1848,69,0	1/1:2,29:30:81.28:2217,81,0	1/1:2,17:20:51.18:1368,51,0	0/0:30,0:30:87.19:0,87,1470	1/1:1,17:18:45.15:1198,45,0	1/1:3,27:30:84.24:2107,84,0	1/1:2,33:35:84.29:2280,84,0	1/1:3,15:19:45.15:1230,45,0	1/1:3,18:22:57.20:1536,57,0	1/1:0,19:18:44.90:1230,45,0	0/0:30,0:30:90.30:0,90,1704	1/1:1,24:25:72.25:1946,72,0	0/0:16,0:16:45.11:0,45,803	1/1:1,6:8:17.65:464,18,0	1/1:1,14:15:42.14:1095,42,0	1/1:5,27:33:75.26:1969,75,0	1/1:1,11:12:36.12:939,36,0	1/1:0,22:21:57.20:1559,57,0	1/1:2,28:33:72.25:1967,72,0	1/1:1,8:9:27.09:712,27,0	1/1:2,11:14:33.11:876,33,0	1/1:2,21:25:69.20:1772,69,0	1/1:2,25:29:69.24:1839,69,0	1/1:0,13:13:18.06:492,18,0
chr10	27173887	.	AC	A	13653.16	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=13.889;DP=666;FS=7.927;HRun=3;HaplotypeScore=63.2282;InbreedingCoeff=0.9993;MQ=77.88;MQ0=0;MQRankSum=-3.518;QD=33.06;ReadPosRankSum=1.755;VQSLOD=5.2439;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,38:39:99:1226,99,0	1/1:2,9:11:24.08:297,24,0	0/0:22,0:22:37.08:0,37,680	0/0:12,0:12:36.04:0,36,457	1/1:1,30:31:84.23:1024,84,0	0/0:20,0:20:60.18:0,60,841	0/0:25,0:25:75.25:0,75,1080	1/1:2,34:36:99:1199,99,0	1/1:0,9:9:24.08:297,24,0	1/1:3,23:26:69.22:855,69,0	1/1:2,30:32:90.21:1089,90,0	0/0:20,0:20:60.19:0,60,846	0/0:21,0:21:63.20:0,63,884	0/0:22,0:22:66.19:0,66,895	0/0:26,0:26:72.22:0,72,1015	1/1:1,28:29:77.98:941,78,0	1/1:2,15:17:42.13:520,42,0	1/1:0,14:14:36.11:446,36,0	1/1:0,20:20:60.14:704,60,0	1/1:1,29:30:81.25:1003,81,0	1/1:0,14:14:39.12:483,39,0	0/0:30,0:30:90.30:0,90,1291	0/0:32,0:32:96.32:0,96,1381	0/0:23,0:23:66.20:0,66,925	1/1:0,29:29:78.25:967,78,0	1/1:1,28:29:84.26:1041,84,0	1/1:1,34:35:93.29:1151,93,0	1/1:0,12:12:33.10:409,33,0
chr10	27176338	.	A	AG	488.63	PASS	AC=14;AF=0.368;AN=38;BaseQRankSum=-0.330;DP=122;FS=4.395;HRun=5;HaplotypeScore=18.5608;InbreedingCoeff=0.6307;MQ=33.48;MQ0=9;MQRankSum=0.470;QD=15.27;ReadPosRankSum=-0.070;VQSLOD=1.3743;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	0/0:1,0:1:3:0,3,29	./.	./.	./.	0/0:4,0:3:6.01:0,6,64	0/0:6,0:4:7.83:0,8,68	0/0:10,0:4:12.03:0,12,129	1/1:2,2:3:3.01:39,3,0	1/1:2,6:8:17.89:236,18,0	1/1:2,3:4:9.03:118,9,0	0/0:4,0:3:7.12:0,7,34	0/0:4,0:4:3.01:0,3,32	0/0:6,0:5:9.02:0,9,97	0/0:10,0:8:15.49:0,15,154	./.	0/0:7,0:6:9.02:0,9,97	./.	1/1:1,1:1:2.98:21,3,0	1/1:1,3:4:6.02:79,6,0	1/1:2,5:6:8.71:99,9,0	0/0:6,0:5:9.02:0,9,95	0/0:7,0:4:12.03:0,12,129	0/0:9,0:9:5.84:0,6,64	./.	./.	./.	1/1:1,1:1:3.01:37,3,0
chr10	27176738	.	G	GGGGAGA	1409.51	PASS	AC=28;AF=0.875;AN=32;BaseQRankSum=-2.599;DP=104;FS=0.000;HRun=0;HaplotypeScore=23.0186;InbreedingCoeff=0.2958;MQ=32.70;MQ0=13;MQRankSum=0.157;QD=23.11;ReadPosRankSum=-0.595;VQSLOD=2.4783;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:1,0:3:2.96:0,3,19	1/1:0,2:3:3.01:108,3,0	./.	./.	1/1:4,0:4:6.89:108,7,0	1/1:8,0:8:5.93:42,6,0	./.	1/1:0,9:5:14.97:364,15,0	1/1:1,0:2:3:25,3,0	1/1:4,0:5:10.98:127,11,0	./.	1/1:0,8:7:3.01:99,3,0	./.	./.	./.	./.	1/1:1,0:1:2.99:24,3,0	1/1:0,0:1:3.01:79,3,0	1/1:1,0:5:11.97:149,12,0	1/1:2,0:4:5.98:101,6,0	./.	./.	./.	./.	1/1:1,0:1:2.94:18,3,0	1/1:0,0:3:9.03:243,9,0	1/1:1,0:1:2.97:20,3,0	0/0:2,0:2:5.94:0,6,41
chr10	27178386	.	AC	A	3816.94	PASS	AB=0.739;AC=46;AF=0.821;AN=56;BaseQRankSum=1.846;DP=416;FS=0.859;HRun=11;HaplotypeScore=80.6891;InbreedingCoeff=0.6859;MQ=63.12;MQ0=1;MQRankSum=-1.030;QD=10.29;ReadPosRankSum=3.118;VQSLOD=3.1593;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:13,18:32:49.91:399,50,0	0/0:8,0:8:12.91:0,13,127	0/0:11,0:11:8.88:0,9,72	0/0:12,2:11:13.19:0,13,99	1/1:4,8:13:19.98:152,20,0	1/1:3,0:13:20.36:59,20,0	1/1:5,0:19:26.47:77,26,0	0/1:12,3:15:28.25:28,0,120	1/1:2,10:13:25.99:203,26,0	1/1:0,6:8:22.05:159,22,0	0/1:6,7:14:5.69:139,0,6	1/1:2,0:9:14.25:41,14,0	1/1:4,0:14:22.40:65,22,0	1/1:2,0:19:32.59:94,33,0	1/1:3,15:20:43.02:332,43,0	1/1:2,13:15:31.52:251,32,0	0/0:12,0:12:12.03:0,12,128	1/1:7,13:23:45.05:338,45,0	1/1:6,1:8:7.85:44,8,0	1/1:3,10:14:22.99:178,23,0	1/1:12,21:33:50.89:419,51,0	1/1:6,0:10:10.17:29,10,0	1/1:3,0:14:22.40:65,22,0	1/1:3,0:29:52.96:153,53,0	1/1:7,7:15:28.81:217,29,0	1/1:2,4:7:17.01:129,17,0	1/1:2,8:10:23.96:197,24,0	1/1:1,2:3:5.99:49,6,0
chr10	27179261	.	AGGTAGGGAGAG	A	26320.16	PASS	AB=0.531;AC=32;AF=0.571;AN=56;BaseQRankSum=17.979;DP=597;FS=0.991;HRun=0;HaplotypeScore=214.3044;InbreedingCoeff=0.8200;MQ=57.83;MQ0=0;MQRankSum=-15.870;QD=80.74;ReadPosRankSum=0.362;VQSLOD=4.7570;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:2,17:19:99:1200,0,109	1/1:0,7:7:18.06:670,18,0	0/0:35,0:33:92.44:0,92,4535	0/0:21,0:18:51.15:0,51,2528	1/1:0,27:27:72.12:2218,72,0	0/0:28,0:28:84.27:0,84,4613	0/0:16,0:16:45.15:0,45,2658	1/1:0,27:27:81.24:2156,81,0	1/1:0,21:21:57.20:2005,57,0	1/1:0,29:29:84.28:2744,84,0	1/1:0,20:20:45.11:1347,45,0	0/0:16,0:16:48.16:0,48,2650	0/0:28,0:28:84.25:0,84,4510	0/0:27,0:27:81.28:0,81,4758	0/0:27,0:27:81.28:0,81,4725	1/1:0,28:28:69.24:2442,69,0	1/1:0,6:6:3.01:112,3,0	0/1:1,7:8:19.82:632,0,20	1/1:0,13:13:39.12:956,39,0	1/1:0,28:28:75.13:2262,75,0	1/1:0,11:11:15.05:498,15,0	0/0:28,0:28:84.26:0,84,4119	0/0:30,0:30:90.31:0,90,5085	0/0:15,0:15:36.12:0,36,2004	1/1:0,23:23:54.19:1728,54,0	1/1:0,28:28:81.27:2798,81,0	1/1:0,27:27:63.12:2217,63,0	1/1:0,4:4:9.03:335,9,0
chr10	27179473	.	A	AT	14893.81	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=2.283;DP=565;FS=7.459;HRun=8;HaplotypeScore=92.9893;InbreedingCoeff=0.9689;MQ=65.02;MQ0=0;MQRankSum=-3.301;QD=28.37;ReadPosRankSum=-0.102;VQSLOD=4.5178;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,22:25:63.15:712,63,0	1/1:1,6:7:18.05:208,18,0	0/0:10,0:10:23.92:0,24,205	0/0:9,0:8:11.18:0,11,131	1/1:1,35:36:99:1148,102,0	1/1:4,23:28:38.56:679,39,0	1/1:1,10:11:24.07:277,24,0	1/1:6,30:36:87.20:979,87,0	1/1:2,18:20:51.15:589,51,0	1/1:1,13:14:39.06:426,39,0	1/1:2,18:20:54.12:608,54,0	1/1:3,9:12:21.06:242,21,0	1/1:1,20:21:63.19:725,63,0	1/1:0,13:13:36.11:415,36,0	0/0:21,0:21:63.03:0,63,576	1/1:3,25:28:72.16:815,72,0	1/1:1,21:24:62.31:721,62,0	1/1:2,14:16:39.12:450,39,0	1/1:4,14:18:42.12:485,42,0	1/1:2,26:28:50.65:795,51,0	1/1:0,13:13:39.12:450,39,0	1/1:4,18:22:51.15:589,51,0	1/1:6,19:25:54.16:623,54,0	1/1:0,15:15:42.12:484,42,0	1/1:3,16:19:36.11:416,36,0	1/1:4,21:26:41.73:719,42,0	1/1:5,30:35:85.07:952,85,0	1/1:1,12:13:11.65:388,12,0
chr10	27184271	.	CGT	C	885.05	PASS	AB=0.903;AC=34;AF=0.850;AN=40;BaseQRankSum=3.779;DP=645;FS=0.000;HRun=0;HaplotypeScore=81.2030;InbreedingCoeff=0.1339;MQ=57.83;MQ0=21;MQRankSum=1.214;QD=2.11;ReadPosRankSum=2.514;VQSLOD=1.3140;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:38:6:0,6,66	./.	./.	./.	1/1:21,1:23:5.85:46,6,0	1/1:20,3:24:2.74:32,3,0	0/1:25,1:27:8.52:9,0,39	./.	1/1:22,1:23:3.01:32,3,0	./.	./.	1/1:14,4:18:5.81:63,6,0	0/1:18,3:21:35.05:55,0,35	1/1:23,3:26:3:32,3,0	1/1:25,6:32:20.88:205,21,0	1/1:22,2:24:6.01:64,6,0	1/1:24,1:27:8.49:41,8,0	1/1:11,6:18:11.28:126,11,0	0/0:20,0:20:0.47:0,0,1	1/1:18,1:19:3.89:34,4,0	1/1:32,0:30:1.55:4,2,0	1/1:17,0:16:3.01:32,3,0	1/1:24,1:23:3.01:32,3,0	1/1:18,5:23:8.27:95,8,0	1/1:16,0:15:2.80:13,3,0	./.	1/1:17,3:21:8.81:77,9,0	./.
chr10	27184844	.	T	TACACAC	4449.37	PASS	AB=1.000;AC=27;AF=0.482;AN=56;BaseQRankSum=0.992;DP=540;FS=0.505;HRun=0;HaplotypeScore=155.8620;InbreedingCoeff=0.7958;MQ=58.69;MQ0=4;MQRankSum=-6.209;QD=17.59;ReadPosRankSum=-3.561;VQSLOD=3.9331;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:20,8:28:5.75:194,6,0	0/0:12,0:12:24.95:0,25,348	0/0:38,0:16:17.51:0,18,401	0/0:27,0:18:20.01:0,20,362	1/1:14,2:17:15.51:367,16,0	0/0:24,0:24:60.11:0,60,688	0/0:21,0:21:57.16:0,57,800	0/1:25,0:25:36.35:36,0,196	1/1:7,5:13:5.46:192,5,0	1/1:15,4:19:19.14:571,19,0	1/1:9,1:10:3.01:91,3,0	0/0:17,0:17:51.09:0,51,618	0/0:22,0:22:44.55:0,45,510	0/0:23,0:23:53.28:0,53,534	0/0:29,0:29:81.23:0,81,1574	1/1:9,0:15:15.05:410,15,0	0/0:19,0:19:33.10:0,33,401	1/1:18,0:18:5.70:270,6,0	1/1:13,0:12:15.33:244,15,0	1/1:25,2:29:14.92:412,15,0	0/0:7,0:7:3.01:0,3,45	0/0:22,0:22:45.05:0,45,558	0/0:12,0:12:27.08:0,27,360	0/0:14,0:14:35.29:0,35,399	1/1:6,0:6:3.01:87,3,0	1/1:16,4:23:39.90:625,40,0	1/1:13,8:25:24.57:719,25,0	1/1:8,0:11:14.80:229,15,0
chr10	27184856	.	CAT	C	2821.42	PASS	AB=0.994;AC=22;AF=0.393;AN=56;BaseQRankSum=-6.730;DP=589;FS=3.436;HRun=0;HaplotypeScore=109.0418;InbreedingCoeff=0.1424;MQ=55.06;MQ0=8;MQRankSum=1.693;QD=8.93;ReadPosRankSum=-8.340;VQSLOD=1.3712;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:23:4.53:38,0,5	0/1:11,1:12:99:104,0,110	0/0:48,0:19:11.97:0,12,458	0/0:33,0:15:25.56:0,26,263	1/1:28,0:28:31.84:359,32,0	0/0:25,0:25:44.09:0,44,619	0/0:24,0:24:57.08:0,57,643	1/1:1,35:36:81.59:929,82,0	0/1:10,0:10:15.29:15,0,20	0/1:20,0:19:41.55:151,0,42	0/1:12,0:12:10.17:99,0,10	0/0:18,0:18:51.09:0,51,555	0/0:19,0:19:45.04:0,45,517	0/0:24,0:24:54.97:0,55,561	0/0:31,0:31:70.95:0,71,1401	0/1:15,0:15:9.81:98,0,10	1/1:1,25:26:33.09:477,33,0	0/1:20,0:19:50.34:92,0,50	1/1:17,0:16:22.12:282,22,0	0/1:24,0:24:14.48:95,0,14	0/1:8,0:8:15.09:18,0,15	0/0:20,0:20:45.02:0,45,432	0/0:14,0:14:27.03:0,27,283	0/0:17,0:17:36.03:0,36,367	0/1:13,0:13:1.59:19,0,2	0/1:20,0:20:99:108,0,112	0/1:22,0:22:50.78:84,0,51	1/1:9,0:9:0.98:37,1,0
chr10	27184858	.	T	TACACAC	3221.60	PASS	AB=0.928;AC=29;AF=0.518;AN=56;BaseQRankSum=-4.247;DP=593;FS=5.850;HRun=0;HaplotypeScore=149.5864;InbreedingCoeff=0.5589;MQ=55.20;MQ0=8;MQRankSum=-5.066;QD=9.18;ReadPosRankSum=-4.124;VQSLOD=1.1721;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:21:3.32:189,3,0	0/0:12,0:12:24.08:0,24,346	0/1:48,0:19:0.78:1,0,290	0/0:35,0:16:15.05:0,15,249	1/1:28,0:28:21.09:341,21,0	0/1:11,0:25:5.32:5,0,72	0/0:12,0:25:13.99:0,14,141	0/1:36,0:36:94.08:94,0,185	0/1:11,0:11:4.17:91,0,4	1/1:20,0:20:21.04:494,21,0	1/1:12,0:12:8.60:125,9,0	0/0:6,0:19:15.77:0,16,141	0/0:5,0:19:12.20:0,12,81	0/0:2,0:23:13.82:0,14,27	0/0:28,0:30:81.24:0,81,1500	1/1:15,0:15:11.33:174,11,0	0/0:26,0:25:33.10:0,33,401	1/1:18,0:17:17.14:133,17,0	1/1:16,0:15:19.88:232,20,0	1/1:25,0:25:16.18:434,16,0	0/1:8,0:8:36.97:111,0,37	0/0:8,0:20:7.09:0,7,13	0/0:5,0:14:7.30:0,7,23	0/0:9,0:19:1.26:0,1,25	1/1:7,8:15:3.01:87,3,0	1/1:20,0:20:15.84:212,16,0	1/1:23,1:24:7.27:582,7,0	1/1:7,0:7:9.29:111,9,0
chr10	27186829	.	AATAT	A	2443.05	PASS	AB=1.000;AC=37;AF=0.841;AN=44;BaseQRankSum=-2.135;DP=138;FS=3.505;HRun=0;HaplotypeScore=27.9022;InbreedingCoeff=0.2187;MQ=83.57;MQ0=2;MQRankSum=-2.046;QD=20.88;ReadPosRankSum=2.291;VQSLOD=2.9931;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,1:1:3.01:51,3,0	1/1:0,3:3:9.03:155,9,0	0/0:8,0:6:0.66:0,1,25	0/1:19,0:9:26.74:27,0,107	1/1:5,1:6:6.02:96,6,0	1/1:2,0:1:0.89:2,1,0	./.	1/1:15,8:23:36.12:591,36,0	1/1:2,0:2:3.01:58,3,0	1/1:9,1:10:9.02:119,9,0	1/1:2,2:4:6.02:103,6,0	./.	1/1:2,0:2:3.01:44,3,0	1/1:4,0:4:2.99:24,3,0	0/0:3,0:3:3.01:0,3,37	1/1:0,1:1:3.01:51,3,0	1/1:2,11:13:36.12:623,36,0	1/1:5,3:7:15.05:251,15,0	./.	./.	0/0:1,0:1:2.99:0,3,24	./.	./.	1/1:0,2:2:3.01:52,3,0	1/1:2,1:3:3.01:51,3,0	1/1:1,1:2:3.01:52,3,0	1/1:2,4:6:9.03:154,9,0	1/1:2,3:5:3.01:52,3,0
chr10	27186839	.	T	TATA	586.29	PASS	AB=0.964;AC=22;AF=0.500;AN=44;BaseQRankSum=-2.830;DP=142;FS=0.912;HRun=0;HaplotypeScore=33.2429;InbreedingCoeff=-0.0859;MQ=84.83;MQ0=4;MQRankSum=-0.743;QD=4.69;ReadPosRankSum=-0.234;VQSLOD=1.4308;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:1,0:1:2.96:0,3,19	0/0:4,0:4:7.52:0,8,60	1/1:15,0:7:4.07:34,4,0	0/1:37,0:12:5.44:5,0,202	0/1:3,0:3:13.05:38,0,13	1/1:2,0:1:0.89:2,1,0	./.	0/1:26,0:26:85.01:85,0,400	1/1:0,2:2:3.01:39,3,0	0/1:3,0:3:10:58,0,10	0/1:4,0:4:12.99:45,0,13	./.	1/1:1,0:1:3.01:44,3,0	1/1:2,0:2:2.99:24,3,0	0/0:3,0:3:3.01:0,3,37	0/0:1,0:1:2.96:0,3,19	0/1:11,1:12:90.51:91,0,117	0/1:7,2:8:35.48:98,0,35	./.	./.	0/0:1,0:1:2.99:0,3,24	./.	./.	0/0:2,0:2:2.96:0,3,19	1/1:1,0:1:3.01:32,3,0	0/0:1,0:1:2.96:0,3,19	0/1:4,0:4:9.99:94,0,10	1/1:3,0:3:3:25,3,0
chr10	27186881	.	A	AAT	2752.43	PASS	AC=32;AF=0.889;AN=36;BaseQRankSum=-1.095;DP=120;FS=0.000;HRun=0;HaplotypeScore=31.1692;InbreedingCoeff=0.3288;MQ=80.54;MQ0=3;MQRankSum=-0.782;QD=28.67;ReadPosRankSum=0.434;VQSLOD=4.1672;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,0:2:6.02:69,6,0	1/1:0,2:2:6.02:102,6,0	1/1:11,0:7:2.04:6,2,0	0/0:21,0:8:2.80:0,3,13	1/1:4,0:4:12.03:140,12,0	./.	1/1:1,0:1:3.01:51,3,0	1/1:10,25:37:81.23:1290,81,0	1/1:1,0:1:2.99:24,3,0	1/1:4,0:4:9.02:89,9,0	1/1:2,0:2:3.01:30,3,0	./.	./.	1/1:2,0:2:6.02:84,6,0	0/0:1,0:1:3.01:0,3,39	1/1:1,0:1:3.01:38,3,0	1/1:1,10:11:27.09:458,27,0	1/1:8,0:7:18.05:195,18,0	1/1:2,0:2:6.01:58,6,0	./.	./.	./.	./.	./.	./.	./.	1/1:3,0:3:6.01:62,6,0	1/1:5,0:5:15.03:155,15,0
chr10	27186884	.	A	ATT	2397.55	PASS	AB=1.000;AC=29;AF=0.725;AN=40;BaseQRankSum=-0.811;DP=120;FS=3.763;HRun=1;HaplotypeScore=29.9021;InbreedingCoeff=0.4239;MQ=77.71;MQ0=2;MQRankSum=-3.150;QD=27.56;ReadPosRankSum=4.713;VQSLOD=2.9437;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,2:2:6.02:116,6,0	1/1:2,0:2:6:53,6,0	0/0:10,0:6:4.44:0,4,42	0/0:19,0:8:7.34:0,7,27	1/1:0,4:4:12.04:229,12,0	./.	1/1:1,0:1:3:26,3,0	0/1:38,0:38:99:520,0,170	1/1:1,0:1:3.01:51,3,0	1/1:0,3:3:9.03:173,9,0	1/1:0,1:1:3.01:58,3,0	./.	0/0:1,0:1:3:0,3,25	1/1:2,0:2:5.88:44,6,0	0/0:1,0:1:3.01:0,3,46	1/1:0,1:1:3.01:58,3,0	1/1:11,0:11:27.06:284,27,0	1/1:1,8:8:18.06:347,18,0	1/1:0,2:4:12.01:166,12,0	./.	./.	./.	./.	0/0:1,0:1:2.99:0,3,24	./.	./.	1/1:1,2:3:6.02:116,6,0	1/1:0,5:5:15.05:288,15,0
chr10	27186990	.	T	TAC	6398.43	PASS	AB=0.638;AC=41;AF=0.732;AN=56;BaseQRankSum=-1.627;DP=414;FS=5.824;HRun=0;HaplotypeScore=61.9097;InbreedingCoeff=0.1025;MQ=64.28;MQ0=4;MQRankSum=-1.640;QD=19.16;ReadPosRankSum=-0.095;VQSLOD=4.3954;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,10:18:9.03:141,9,0	1/1:1,0:3:3:26,3,0	0/0:32,0:18:15.03:0,15,174	0/0:29,0:14:8.97:0,9,84	1/1:7,7:14:12.04:187,12,0	0/1:1,6:7:13.77:260,0,14	1/1:3,4:7:18.02:253,18,0	1/1:27,3:37:50.58:476,51,0	0/1:4,8:12:10.75:291,0,11	0/1:10,5:16:16.79:216,0,17	1/1:2,4:6:5.98:94,6,0	1/1:3,5:7:15.05:233,15,0	0/1:2,6:8:13.77:249,0,14	1/1:3,5:8:12.04:187,12,0	0/0:17,0:17:33.09:0,33,373	1/1:1,9:10:27.09:422,27,0	1/1:9,2:24:4.17:281,4,0	0/1:22,8:29:79.96:503,0,80	1/1:8,6:14:24.08:343,24,0	1/1:2,7:9:15.05:234,15,0	0/1:5,10:15:7.74:348,0,8	1/1:6,1:7:3.01:47,3,0	1/1:2,4:6:6.02:94,6,0	0/1:5,9:15:4.73:391,0,5	0/1:5,4:10:25.81:85,0,26	0/1:9,10:20:4.76:347,0,5	1/1:4,15:19:7.31:574,7,0	1/1:8,2:10:9.01:117,9,0
chr10	27187149	.	G	GTT	14617.86	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-8.826;DP=426;FS=0.389;HRun=2;HaplotypeScore=49.9181;InbreedingCoeff=0.9932;MQ=83.50;MQ0=0;MQRankSum=-2.320;QD=50.76;ReadPosRankSum=1.225;VQSLOD=4.4506;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,25:25:72.25:1348,72,0	1/1:0,5:5:15.05:281,15,0	0/0:13,0:13:33.11:0,33,477	0/0:12,0:12:33.11:0,33,481	1/1:2,12:15:36.12:657,36,0	0/0:12,0:12:33.11:0,33,486	0/0:11,0:11:30.08:0,30,421	1/1:1,29:30:90.29:1640,90,0	1/1:1,15:16:48.13:864,48,0	1/1:0,25:25:75.25:1368,75,0	1/1:1,14:15:42.14:787,42,0	0/0:10,0:10:27.09:0,27,397	0/0:14,0:14:42.14:0,42,613	0/0:15,0:15:45.14:0,45,641	0/0:19,0:19:51.17:0,51,751	1/1:2,17:20:45.15:843,45,0	1/1:3,7:10:21.07:393,21,0	1/1:0,13:13:36.08:638,36,0	1/1:0,14:14:42.14:785,42,0	1/1:0,18:18:54.19:1012,54,0	1/1:0,6:6:18.06:337,18,0	0/0:14,0:14:42.11:0,42,577	0/0:11,0:11:33.11:0,33,486	0/0:7,0:7:15.05:0,15,221	1/1:0,13:13:33.11:617,33,0	1/1:2,18:20:54.17:968,54,0	1/1:2,29:31:81.28:1517,81,0	1/1:0,11:11:30.10:562,30,0
chr10	27187861	.	CT	C	3823.88	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=13.499;DP=550;FS=0.762;HRun=8;HaplotypeScore=52.7866;InbreedingCoeff=0.9937;MQ=77.21;MQ0=0;MQRankSum=-1.401;QD=24.36;ReadPosRankSum=4.250;VQSLOD=4.1437;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:8:18.06:0,18,217	0/0:13,0:13:36.10:0,36,423	0/0:12,0:12:27.06:0,27,306	0/0:10,0:10:21.01:0,21,219	0/0:28,0:28:69.20:0,69,822	1/1:3,23:26:69.11:666,69,0	1/1:2,9:11:24.04:232,24,0	0/0:27,1:27:46.24:0,46,830	0/0:18,0:18:51.16:0,51,616	0/0:26,0:26:75.21:0,75,887	0/0:25,0:25:75.19:0,75,890	1/1:0,13:13:30.05:290,30,0	1/1:3,23:26:63.10:608,63,0	1/1:6,16:22:45.07:435,45,0	0/0:27,0:27:78.24:0,78,942	0/0:22,0:22:66.20:0,66,797	0/0:18,0:18:45.14:0,45,544	0/0:16,0:16:42.12:0,42,492	0/0:22,0:22:54.17:0,54,652	0/0:27,0:27:72.22:0,72,869	0/0:8,0:8:21.06:0,21,254	1/1:1,21:22:63.10:608,63,0	1/1:1,28:29:78.06:753,78,0	1/1:0,8:8:24.04:232,24,0	0/0:17,0:17:51.16:0,51,616	0/0:32,0:32:90.28:0,90,1087	0/0:31,0:31:90.28:0,90,1086	0/0:5,0:5:15.05:0,15,181
chr10	27188857	.	TA	T	5153.24	PASS	AB=0.612;AC=49;AF=0.875;AN=56;BaseQRankSum=-1.222;DP=512;FS=2.810;HRun=14;HaplotypeScore=63.3762;InbreedingCoeff=0.3535;MQ=69.07;MQ0=0;MQRankSum=-1.257;QD=10.63;ReadPosRankSum=4.221;VQSLOD=4.6285;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,15:22:45.65:296,46,0	1/1:1,0:10:18.33:54,18,0	0/0:15,1:14:20.95:0,21,131	0/0:11,0:9:1.04:0,1,74	1/1:9,20:29:50.34:344,50,0	0/1:6,10:17:45.77:153,0,46	1/1:4,7:13:20.27:149,20,0	1/1:10,0:27:34.36:101,34,0	1/1:3,17:21:43.68:294,44,0	1/1:7,11:19:6.86:183,7,0	1/1:5,18:26:28.75:318,29,0	1/1:3,13:16:29.66:205,30,0	1/1:4,12:16:26.72:185,27,0	1/1:5,10:16:0.94:142,1,0	1/1:7,13:20:38.57:267,39,0	1/1:3,13:16:32.70:226,33,0	1/1:4,0:25:36.64:107,37,0	1/1:7,7:16:21.80:135,22,0	1/1:7,5:12:17.78:123,18,0	1/1:4,16:20:35.49:246,35,0	1/1:1,15:16:35.71:247,36,0	1/1:7,11:18:31.71:211,32,0	0/1:6,16:23:20.56:237,0,21	1/1:1,3:4:8.92:62,9,0	0/1:7,7:16:5.85:93,0,6	1/1:7,12:20:35.65:247,36,0	1/1:10,13:23:34.70:232,35,0	1/1:5,17:24:43.41:296,43,0
chr10	27190105	.	AGGG	A	10681.70	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-3.188;DP=536;FS=7.679;HRun=11;HaplotypeScore=139.4931;InbreedingCoeff=0.9833;MQ=77.12;MQ0=2;MQRankSum=-2.974;QD=23.12;ReadPosRankSum=4.026;VQSLOD=2.5048;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,18:22:36.06:473,36,0	1/1:0,12:12:30.10:387,30,0	0/0:34,0:24:19.58:0,20,414	0/0:20,0:16:21.04:0,21,278	1/1:2,20:22:54.08:658,54,0	1/1:2,0:25:58.83:359,59,0	1/1:3,0:20:38.36:255,38,0	1/1:5,11:16:33.08:419,33,0	1/1:4,16:20:42.12:551,42,0	1/1:3,18:21:51.13:634,51,0	1/1:4,15:19:39.10:512,39,0	1/1:2,0:21:38.95:270,39,0	1/1:2,0:22:47.06:287,47,0	1/1:0,0:16:41.19:251,41,0	0/0:5,0:19:22.11:0,22,67	1/1:2,21:23:60.18:788,60,0	1/1:6,18:25:48.08:608,48,0	1/1:2,10:12:30.10:390,30,0	1/1:5,7:12:21.04:276,21,0	1/1:9,13:22:45.07:555,45,0	1/1:0,8:8:15.05:197,15,0	1/1:4,0:27:61.79:379,62,0	1/1:1,0:18:41.16:251,41,0	1/1:3,0:12:23.51:143,24,0	1/1:1,13:14:24.07:314,24,0	1/1:1,21:22:60.66:786,61,0	1/1:5,20:25:54.15:702,54,0	1/1:0,6:6:18.06:237,18,0
chr10	27190114	.	GGGT	G	3823	PASS	AB=0.996;AC=38;AF=0.679;AN=56;BaseQRankSum=1.954;DP=527;FS=0.000;HRun=0;HaplotypeScore=153.6640;InbreedingCoeff=0.1339;MQ=74.82;MQ0=2;MQRankSum=-4.958;QD=8.87;ReadPosRankSum=5.653;VQSLOD=2.4341;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:21,0:21:20.88:162,0,21	1/1:12,0:12:29.06:171,29,0	0/0:30,0:20:19.20:0,19,362	0/0:22,0:17:10.98:0,11,336	1/1:20,1:21:49.67:317,50,0	0/0:27,0:27:8.22:0,8,79	1/1:17,0:17:21.53:67,22,0	0/1:17,0:17:97.96:148,0,98	1/1:16,1:17:40.90:278,41,0	1/1:19,0:19:14.30:170,14,0	0/1:19,0:19:21.87:185,0,22	0/1:28,0:28:17.32:17,0,127	0/1:22,0:22:16.60:17,0,34	1/1:17,0:17:1.73:55,2,0	0/0:17,0:17:33.15:0,33,151	0/1:25,1:26:27.58:283,0,28	1/1:22,0:22:22.86:253,23,0	1/1:10,1:11:28.97:205,29,0	0/1:16,0:16:82.87:83,0,180	1/1:13,3:16:41.47:291,41,0	1/1:9,0:9:14.46:85,14,0	1/1:23,0:23:12.13:52,12,0	0/1:20,0:20:30.30:30,0,35	0/1:12,0:12:17.34:17,0,19	0/1:18,0:18:60.08:136,0,60	1/1:21,0:21:58.67:369,59,0	1/1:21,0:21:30.89:325,31,0	1/1:6,0:6:17.53:108,18,0
chr10	27190542	.	TA	T	3639.36	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-3.104;DP=487;FS=9.499;HRun=3;HaplotypeScore=85.1366;InbreedingCoeff=0.9884;MQ=78.49;MQ0=0;MQRankSum=-0.982;QD=31.37;ReadPosRankSum=4.194;VQSLOD=3.3636;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:51.14:0,51,707	0/0:11,0:11:33.11:0,33,472	0/0:18,0:18:45.07:0,45,576	0/0:6,0:6:12.80:0,13,169	0/0:32,0:32:96.26:0,96,1316	1/1:1,16:17:48.15:594,48,0	1/1:0,6:6:12.04:149,12,0	0/0:21,0:21:57.17:0,57,769	0/0:14,0:14:42.13:0,42,585	0/0:24,0:24:72.24:0,72,1017	0/0:30,0:30:90.25:0,90,1232	1/1:0,12:12:27.08:334,27,0	1/1:1,13:14:36.11:446,36,0	1/1:0,9:9:27.08:334,27,0	0/0:17,0:17:51.14:0,51,693	0/0:10,0:10:30.10:0,30,429	0/0:18,0:18:54.18:0,54,770	0/0:10,0:10:27.09:0,27,386	0/0:24,0:24:72.21:0,72,979	0/0:35,0:35:99:0,105,1382	0/0:12,0:12:33.11:0,33,472	1/1:0,17:17:48.15:594,48,0	1/1:0,28:28:63.02:780,63,0	1/1:0,13:13:33.10:408,33,0	0/0:24,0:24:69.22:0,69,969	0/0:18,0:18:54.16:0,54,754	0/0:24,0:24:72.24:0,72,1023	0/0:6,0:6:18.06:0,18,257
chr10	27192371	.	GA	G	14593.76	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=11.319;DP=652;FS=1.700;HRun=3;HaplotypeScore=131.9396;InbreedingCoeff=0.9998;MQ=90.59;MQ0=0;MQRankSum=-5.493;QD=34.83;ReadPosRankSum=2.658;VQSLOD=3.9886;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,29:29:78.25:966,78,0	1/1:0,15:15:45.14:558,45,0	0/0:31,0:31:87.26:0,87,1185	0/0:19,0:19:53.51:0,54,692	1/1:0,30:30:90.28:1097,90,0	0/0:23,0:23:69.16:0,69,966	0/0:19,0:19:39.07:0,39,684	1/1:0,31:31:93.28:1134,93,0	1/1:0,14:14:39.12:483,39,0	1/1:0,29:29:87.27:1077,87,0	1/1:0,22:22:63.20:777,63,0	0/0:19,0:19:54.18:0,54,775	0/0:23,0:23:69.22:0,69,973	0/0:22,0:22:66.21:0,66,930	0/0:27,0:27:81.27:0,81,1166	1/1:0,26:26:69.22:855,69,0	1/1:0,24:24:72.23:892,72,0	1/1:0,14:14:35.82:446,36,0	1/1:2,11:13:33.10:409,33,0	1/1:0,32:32:90.28:1111,90,0	1/1:0,30:30:81.25:1004,81,0	0/0:19,0:19:57.19:0,57,821	0/0:17,0:17:48.16:0,48,690	0/0:14,0:14:42.14:0,42,605	1/1:0,32:32:90.28:1111,90,0	1/1:0,25:25:75.24:930,75,0	1/1:2,39:41:99:1372,111,0	1/1:1,11:12:30.09:371,30,0
chr10	27194295	.	CCTCTCTCTCT	C	11520.94	PASS	AB=0.923;AC=47;AF=0.839;AN=56;BaseQRankSum=0.661;DP=416;FS=12.372;HRun=0;HaplotypeScore=133.9812;InbreedingCoeff=0.7483;MQ=52.43;MQ0=16;MQRankSum=-1.552;QD=33.99;ReadPosRankSum=0.051;VQSLOD=4.0311;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:11,1:12:3.13:63,0,3	0/0:7,0:7:15.05:0,15,514	1/1:24,0:7:2.32:18,2,0	0/0:41,0:8:11.95:0,12,98	1/1:6,13:19:41.80:725,42,0	1/1:12,8:20:30.86:671,31,0	1/1:8,1:9:11.97:101,12,0	1/1:19,0:18:14.77:166,15,0	1/1:6,8:13:30.09:810,30,0	1/1:9,7:17:11.20:848,11,0	1/1:10,8:18:34.20:728,34,0	1/1:4,8:12:32.94:704,33,0	1/1:5,12:17:45.08:1109,45,0	1/1:6,3:9:11.85:147,12,0	0/0:4,0:16:20.79:0,21,233	1/1:10,8:19:44.99:823,45,0	0/0:12,0:11:12.47:0,12,252	1/1:4,2:6:12.01:257,12,0	1/1:10,2:12:14.40:273,14,0	1/1:11,7:18:38.58:780,39,0	1/1:13,0:11:15.03:202,15,0	1/1:6,3:9:20.70:391,21,0	1/1:4,6:10:26.79:523,27,0	1/1:6,3:9:3.01:92,3,0	1/1:7,10:17:18.06:857,18,0	1/1:8,6:14:24.03:615,24,0	1/1:9,3:12:20.93:343,21,0	1/1:6,3:9:9.03:275,9,0
chr10	27194330	.	C	CTCTT	273.79	PASS	AB=1.000;AC=5;AF=0.093;AN=54;BaseQRankSum=-1.561;DP=565;FS=3.976;HRun=0;HaplotypeScore=176.6919;InbreedingCoeff=0.7020;MQ=40.33;MQ0=80;MQRankSum=-0.417;QD=7.82;ReadPosRankSum=-2.006;VQSLOD=2.3588;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:14,0:12:0.90:1,0,115	1/1:8,3:11:16.60:277,17,0	./.	0/0:75,0:4:4.20:0,4,22	0/0:30,0:27:53.19:0,53,890	0/0:22,0:21:46.69:0,47,687	0/0:10,0:10:21:0,21,284	0/0:21,0:21:48.07:0,48,825	0/0:19,0:17:45.11:0,45,727	0/0:22,0:20:54.16:0,54,901	0/0:27,0:25:58.46:0,58,1001	0/0:18,0:16:23.85:0,24,407	0/0:23,0:22:54.15:0,54,924	0/0:8,0:7:11.97:0,12,151	0/0:19,0:18:3.20:0,3,248	0/0:19,0:19:48.06:0,48,826	1/1:8,1:9:14.76:111,15,0	0/0:5,0:4:12.04:0,12,204	0/0:11,0:8:24.05:0,24,398	0/0:24,0:22:41.36:0,41,789	0/0:11,0:9:15.04:0,15,252	0/0:15,0:13:27.09:0,27,469	0/0:19,0:19:34.69:0,35,522	0/0:10,0:8:14.94:0,15,226	0/0:25,0:23:43.91:0,44,765	0/0:17,0:16:48.16:0,48,840	0/0:14,0:14:32.78:0,33,532	0/0:5,0:5:15.05:0,15,246
chr10	27194340	.	CAG	C	3126.71	PASS	AB=0.995;AC=41;AF=0.732;AN=56;BaseQRankSum=1.359;DP=664;FS=28.025;HRun=0;HaplotypeScore=158.0509;InbreedingCoeff=0.0933;MQ=41.91;MQ0=91;MQRankSum=2.468;QD=6.93;ReadPosRankSum=7.364;VQSLOD=1.5094;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:11:14.55:86,15,0	1/1:12,0:12:2.74:67,3,0	0/0:99,0:11:32.52:0,33,429	0/0:96,0:5:1.54:0,2,36	1/1:31,0:28:20.06:215,20,0	1/1:27,0:26:15.84:212,16,0	1/1:13,0:13:19.79:105,20,0	0/1:27,0:27:99:147,0,150	0/1:18,0:17:0.03:114,0,0	0/1:25,0:22:8:197,0,8	0/1:30,0:28:24.18:209,0,24	1/1:17,0:15:22.38:123,22,0	1/1:25,0:24:9.70:172,10,0	1/1:8,0:7:8.35:56,8,0	0/0:17,0:17:11.35:0,11,135	1/1:22,0:22:27.54:203,28,0	0/1:10,0:9:19.15:19,0,20	0/1:5,0:4:16.67:17,0,32	0/1:12,0:9:25.72:60,0,26	1/1:23,0:21:24.80:169,25,0	1/1:15,0:13:19.53:95,20,0	1/1:15,1:15:12.25:145,12,0	1/1:18,0:18:22.66:156,23,0	1/1:12,0:10:0.43:63,0,0	1/1:27,1:26:46.67:265,47,0	0/1:20,1:20:12.27:179,0,12	1/1:14,1:16:12.24:182,12,0	0/1:7,0:7:24.30:33,0,24
chr10	27194341	.	AGT	A	9203.64	PASS	AB=0.545;AC=51;AF=0.911;AN=56;BaseQRankSum=1.779;DP=665;FS=9.052;HRun=0;HaplotypeScore=138.4748;InbreedingCoeff=0.6206;MQ=41.94;MQ0=91;MQRankSum=1.253;QD=19.62;ReadPosRankSum=5.271;VQSLOD=4.9321;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,8:11:15.05:182,15,0	1/1:4,8:12:10.78:100,11,0	0/0:99,0:11:32.97:0,33,465	0/0:97,0:6:10.76:0,11,101	1/1:7,23:28:53.73:570,54,0	1/1:4,23:26:54.13:645,54,0	0/1:2,10:12:1.01:227,0,1	1/1:9,18:27:22.15:591,22,0	1/1:2,16:17:38.97:416,39,0	1/1:5,20:22:54.14:650,54,0	1/1:5,25:28:7.87:568,8,0	1/1:3,14:15:24.03:271,24,0	1/1:3,22:24:47.90:532,48,0	1/1:7,1:8:14.88:162,15,0	1/1:17,1:17:5.16:26,5,0	1/1:3,18:22:44.86:526,45,0	1/1:8,2:9:0.39:62,0,0	1/1:3,2:4:6.02:72,6,0	1/1:5,7:9:21.06:248,21,0	1/1:4,19:21:50.82:563,51,0	1/1:2,13:13:21.07:260,21,0	1/1:3,13:15:30.04:354,30,0	1/1:1,15:18:32.80:363,33,0	1/1:1,11:10:18.01:200,18,0	1/1:3,24:25:51.07:584,51,0	1/1:4,17:20:48.14:581,48,0	1/1:4,12:16:30.03:340,30,0	1/1:2,5:7:9.03:110,9,0
chr10	27194717	.	C	CA	8320.79	PASS	AB=1.000;AC=51;AF=0.911;AN=56;BaseQRankSum=-2.443;DP=491;FS=2.014;HRun=10;HaplotypeScore=101.9182;InbreedingCoeff=0.6279;MQ=62.23;MQ0=2;MQRankSum=-0.951;QD=18.05;ReadPosRankSum=1.024;VQSLOD=5.0394;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,6:9:20.99:202,21,0	1/1:5,0:7:5.41:41,5,0	0/0:16,0:13:0.38:0,0,122	0/0:13,0:9:8.60:0,9,74	1/1:9,10:20:35.58:336,36,0	1/1:11,11:24:50.49:478,50,0	1/1:6,4:10:28.94:245,29,0	1/1:12,12:25:48.14:439,48,0	1/1:10,5:15:11.41:299,11,0	1/1:10,9:20:34.70:329,35,0	1/1:11,14:25:54.11:560,54,0	1/1:8,7:15:29.99:289,30,0	1/1:14,10:23:36.52:368,37,0	1/1:10,7:17:14.32:322,14,0	1/1:14,0:20:38.10:213,38,0	1/1:16,13:29:60.02:600,60,0	0/1:9,0:9:0.03:22,0,0	1/1:5,10:14:38.60:354,39,0	1/1:11,1:19:29.70:166,30,0	1/1:17,0:30:52.41:291,52,0	1/1:3,0:9:18.60:90,19,0	1/1:6,3:9:20.98:191,21,0	1/1:6,10:17:44.90:440,45,0	1/1:8,5:13:21:200,21,0	1/1:6,8:15:38.83:369,39,0	1/1:12,15:27:66.11:679,66,0	1/1:12,13:25:42.80:526,43,0	1/1:5,6:11:27.04:273,27,0
chr10	27194733	.	AC	A	139.46	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=4.977;DP=493;FS=15.226;HRun=1;HaplotypeScore=115.9122;InbreedingCoeff=0.8911;MQ=55.29;MQ0=4;MQRankSum=-4.304;QD=8.20;ReadPosRankSum=-2.291;VQSLOD=-0.5546;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:29.33:0,29,368	1/1:1,3:4:7.21:71,7,0	0/0:16,0:10:17.58:0,18,238	0/0:14,1:9:12.39:0,12,132	0/0:17,0:17:36.80:0,37,520	0/0:19,0:19:42.96:0,43,565	0/0:15,0:15:38.63:0,39,442	0/0:34,0:35:63.30:0,63,1030	0/0:14,0:14:38.89:0,39,516	0/0:23,0:23:69.12:0,69,869	0/0:23,0:23:63.06:0,63,814	0/0:18,0:18:25.43:0,25,456	0/0:20,0:19:54.63:0,55,713	0/0:15,0:15:42.11:0,42,526	0/0:18,0:18:51.19:0,51,576	0/0:25,0:25:72.01:0,72,905	1/1:10,3:13:26.59:181,27,0	0/0:17,0:16:10.36:0,10,406	0/0:17,0:15:19.17:0,19,318	0/0:32,0:32:73.73:0,74,1096	0/0:15,0:14:42:0,42,511	0/0:6,0:6:18.01:0,18,194	0/0:17,0:16:48.01:0,48,566	0/0:12,0:12:11.83:0,12,310	0/0:16,0:15:45.03:0,45,564	0/0:25,0:25:75.24:0,75,1017	0/0:23,0:23:66.10:0,66,840	0/0:10,0:10:30.07:0,30,382
chr10	27194739	.	AC	A	170.39	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.777;DP=484;FS=21.547;HRun=1;HaplotypeScore=113.3721;InbreedingCoeff=0.9016;MQ=53.58;MQ0=3;MQRankSum=-4.755;QD=8.11;ReadPosRankSum=-1.263;VQSLOD=-0.5105;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:33.06:0,33,437	1/1:3,3:6:9.86:74,10,0	0/0:14,0:9:10.78:0,11,234	0/0:14,0:8:11.17:0,11,86	0/0:18,0:18:47.62:0,48,594	0/0:18,0:18:40.60:0,41,547	0/0:16,0:16:35.70:0,36,486	0/0:35,0:35:82.05:0,82,1086	0/0:15,0:15:45.10:0,45,583	0/0:21,0:21:63.20:0,63,881	0/0:22,0:22:60.15:0,60,788	0/0:18,1:19:19.96:0,20,469	0/0:20,0:20:52.16:0,52,699	0/0:14,0:14:39.12:0,39,514	0/0:20,0:20:43.45:0,43,692	0/0:24,0:24:69.23:0,69,971	1/1:11,4:15:30.83:211,31,0	0/0:16,0:14:26.27:0,26,453	0/0:14,0:12:19.11:0,19,289	0/0:33,0:33:94.45:0,94,1232	0/0:15,0:15:45.06:0,45,579	0/0:3,0:3:9.03:0,9,118	0/0:16,0:15:36.62:0,37,478	0/0:11,0:11:29.99:0,30,378	0/0:14,0:13:39.06:0,39,529	0/0:25,0:25:71.80:0,72,959	0/0:24,0:24:69.16:0,69,894	0/0:10,0:10:30.10:0,30,425
chr10	27194752	.	C	CA	7625.24	PASS	AB=0.835;AC=48;AF=0.857;AN=56;BaseQRankSum=-4.927;DP=484;FS=0.689;HRun=9;HaplotypeScore=84.7393;InbreedingCoeff=0.3772;MQ=60.04;MQ0=3;MQRankSum=-0.737;QD=16.65;ReadPosRankSum=2.833;VQSLOD=5.1385;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,9:13:1.02:239,1,0	0/0:11,0:11:22.76:0,23,179	0/1:15,0:10:18.27:18,0,94	0/1:15,0:9:18.03:22,0,18	0/1:11,11:23:16.22:263,0,16	1/1:4,0:21:27.57:149,28,0	1/1:5,0:18:25.73:126,26,0	1/1:9,25:34:67.97:718,68,0	1/1:2,12:14:36.10:398,36,0	1/1:6,17:23:54.11:585,54,0	1/1:3,19:24:53.23:552,53,0	1/1:6,0:16:28.22:143,28,0	1/1:9,0:20:42.99:232,43,0	1/1:4,1:16:28.82:152,29,0	1/1:4,13:17:10.33:339,10,0	1/1:4,20:24:48.13:531,48,0	0/0:15,0:15:29.16:0,29,189	0/1:7,6:12:7.36:140,0,7	1/1:9,2:9:12.03:132,12,0	1/1:9,22:32:42.96:685,43,0	1/1:3,13:16:39.06:411,39,0	1/1:1,0:5:11.49:60,11,0	1/1:3,0:14:13.91:77,14,0	1/1:2,0:11:20.02:101,20,0	1/1:3,10:12:30.08:332,30,0	1/1:6,14:20:42.11:464,42,0	1/1:4,16:21:44.13:511,44,0	1/1:0,7:8:23.90:246,24,0
chr10	27197435	.	CTCTTT	C	7454.13	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=12.405;DP=571;FS=0.000;HRun=0;HaplotypeScore=109.8554;InbreedingCoeff=0.9945;MQ=75.45;MQ0=1;MQRankSum=-4.741;QD=44.90;ReadPosRankSum=2.553;VQSLOD=4.7565;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:39.13:0,39,1085	0/0:11,0:11:27.09:0,27,789	0/0:18,0:17:45.15:0,45,1211	0/0:11,0:11:18.53:0,19,511	0/0:33,0:33:90.31:0,90,2709	1/1:3,34:37:78.27:1594,78,0	1/1:3,11:14:24.08:485,24,0	0/0:34,0:34:84.28:0,84,2463	0/0:20,0:20:57.20:0,57,1753	0/0:22,0:22:63.22:0,63,1918	0/0:17,0:17:48.16:0,48,1386	1/1:5,9:14:24.08:498,24,0	1/1:1,19:20:54.18:1098,54,0	1/1:2,22:24:57.19:1114,57,0	0/0:26,0:26:66.23:0,66,2013	0/0:24,0:24:69.24:0,69,2122	0/0:18,0:18:54.19:0,54,1582	0/0:15,0:15:42.14:0,42,1291	0/0:20,0:20:57.19:0,57,1687	0/0:28,0:28:81.28:0,81,2486	0/0:6,0:6:18.04:0,18,485	1/1:1,25:26:63.21:1194,63,0	1/1:2,17:19:51.17:1035,51,0	1/1:1,11:12:21.07:435,21,0	0/0:15,0:15:45.15:0,45,1342	0/0:35,0:35:93.30:0,93,2654	0/0:33,0:33:96.33:0,96,2868	0/0:6,0:6:18.06:0,18,533
chr10	27197540	.	GT	G	446.25	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=6.974;DP=555;FS=0.652;HRun=10;HaplotypeScore=58.0861;InbreedingCoeff=0.5564;MQ=77.23;MQ0=1;MQRankSum=1.091;QD=9.49;ReadPosRankSum=-0.343;VQSLOD=2.1044;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:42.10:0,42,456	0/0:5,0:5:15.04:0,15,166	0/0:16,0:15:12.15:0,12,157	0/1:19,0:12:4.16:4,0,121	0/0:29,0:29:84.23:0,84,929	0/0:23,0:23:63.17:0,63,695	0/0:18,0:18:51.13:0,51,556	0/0:24,0:24:57.15:0,57,630	0/0:17,0:17:13.08:0,13,372	0/0:21,0:21:54.15:0,54,597	0/0:21,0:21:57.15:0,57,631	0/0:15,1:16:10.04:0,10,339	0/0:20,0:20:57.15:0,57,631	0/0:20,0:20:54.08:0,54,582	1/1:4,24:28:35.88:540,36,0	0/0:27,0:27:74.65:0,75,798	0/0:16,0:17:41.95:0,42,445	0/0:6,0:6:15.04:0,15,166	0/0:28,1:29:46.14:0,46,736	0/0:34,1:35:64.19:0,64,931	0/0:8,0:11:25.80:0,26,288	0/0:26,1:27:45.97:0,46,718	0/0:18,0:18:51.12:0,51,555	0/0:17,1:18:23.67:0,24,475	0/0:18,0:18:42.11:0,42,465	0/0:19,0:19:48.13:0,48,531	0/0:25,0:25:60.16:0,60,663	0/0:11,1:12:1.02:0,1,239
chr10	27198841	.	AAT	A	6664.72	PASS	AB=0.863;AC=51;AF=0.944;AN=54;BaseQRankSum=-1.608;DP=285;FS=13.663;HRun=0;HaplotypeScore=58.7207;InbreedingCoeff=-0.0508;MQ=76.17;MQ0=1;MQRankSum=-1.193;QD=23.72;ReadPosRankSum=0.329;VQSLOD=4.4360;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,9:13:32.93:380,33,0	0/1:1,1:2:30.63:31,0,43	./.	0/1:22,0:15:19.20:19,0,65	1/1:7,15:22:51.08:590,51,0	1/1:2,5:7:15.05:183,15,0	1/1:2,6:8:21.06:246,21,0	1/1:12,23:35:69.14:794,69,0	1/1:2,7:9:21.06:257,21,0	1/1:2,3:5:12.03:137,12,0	1/1:6,13:19:42.09:496,42,0	1/1:1,4:5:15.04:172,15,0	1/1:2,6:8:21.07:256,21,0	1/1:0,5:5:9.03:110,9,0	1/1:1,7:8:21.07:257,21,0	1/1:0,3:3:9.03:110,9,0	0/1:11,1:12:12.57:13,0,316	1/1:3,8:11:24.08:293,24,0	1/1:6,5:12:23.90:260,24,0	1/1:6,7:13:27.03:301,27,0	1/1:1,1:2:3.01:37,3,0	1/1:0,1:1:3.01:37,3,0	1/1:2,4:6:12.04:147,12,0	1/1:1,6:7:21.07:257,21,0	1/1:1,8:9:21.07:257,21,0	1/1:2,6:8:18.06:220,18,0	1/1:3,11:14:33.10:403,33,0	1/1:3,11:14:33.10:403,33,0
chr10	27198930	.	T	TG	2632.10	PASS	AB=1.000;AC=39;AF=0.696;AN=56;BaseQRankSum=-1.234;DP=391;FS=0.000;HRun=1;HaplotypeScore=68.7164;InbreedingCoeff=0.2681;MQ=71.14;MQ0=1;MQRankSum=-2.345;QD=7.81;ReadPosRankSum=6.255;VQSLOD=0.6297;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:26:12.38:137,0,12	0/0:3,0:3:9.03:0,9,117	0/0:23,0:20:46.55:0,47,622	0/0:12,0:10:21.39:0,21,231	1/1:19,0:19:27.22:139,27,0	1/1:15,0:15:28.59:111,29,0	0/1:11,0:11:1.10:56,0,1	0/1:32,0:32:34.74:134,0,35	1/1:7,0:7:17.62:62,18,0	0/1:21,0:21:6.74:78,0,7	0/1:14,0:14:6.84:73,0,7	1/1:12,0:12:3.32:65,3,0	1/1:9,0:9:19.94:71,20,0	1/1:9,0:9:22.32:81,22,0	1/1:0,19:19:51.17:762,51,0	1/1:12,0:12:25.28:90,25,0	0/0:16,0:16:45.13:0,45,565	0/1:13,0:13:14.92:105,0,15	0/1:11,0:11:25.25:44,0,25	1/1:19,0:19:32.12:161,32,0	1/1:5,0:5:12.66:45,13,0	1/1:7,0:6:18.26:68,18,0	1/1:10,0:10:9.41:70,9,0	0/1:10,0:10:3.48:50,0,3	1/1:13,0:13:32.37:112,32,0	0/1:16,0:16:9.54:59,0,10	1/1:15,0:15:36.41:136,36,0	1/1:12,0:12:11.98:98,12,0
chr10	27198931	.	G	GT	9852.67	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-7.615;DP=396;FS=0.729;HRun=8;HaplotypeScore=45.5282;InbreedingCoeff=0.9621;MQ=71.92;MQ0=1;MQRankSum=-2.139;QD=28.81;ReadPosRankSum=1.922;VQSLOD=5.0326;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,23:26:63.19:727,63,0	0/0:3,0:3:9:0,9,82	0/0:23,0:20:33.54:0,34,319	0/0:13,0:11:17.90:0,18,147	1/1:2,18:20:51.06:550,51,0	1/1:0,16:16:33.10:378,33,0	1/1:1,10:11:24.07:277,24,0	1/1:4,28:32:84.25:967,84,0	1/1:0,7:7:21.06:242,21,0	1/1:2,19:21:57.17:656,57,0	1/1:2,12:14:11.61:370,12,0	1/1:2,11:13:30.09:346,30,0	1/1:0,9:9:24.07:277,24,0	1/1:0,9:9:27.08:312,27,0	1/1:19,0:19:50.10:311,50,0	1/1:0,12:12:30.09:346,30,0	0/0:15,0:15:45.02:0,45,412	1/1:3,10:13:33.06:361,33,0	1/1:3,9:12:27.08:312,27,0	1/1:1,18:19:54.16:622,54,0	1/1:0,5:5:15.04:173,15,0	1/1:1,7:7:21.06:242,21,0	1/1:0,10:10:27.08:312,27,0	1/1:1,9:10:24.07:277,24,0	1/1:0,13:13:39.12:450,39,0	1/1:2,14:16:42.12:480,42,0	1/1:0,15:15:42.12:485,42,0	1/1:1,11:12:33.10:381,33,0
chr10	27199389	.	T	TA	8147.45	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-9.634;DP=464;FS=0.000;HRun=9;HaplotypeScore=42.0387;InbreedingCoeff=0.9299;MQ=68.92;MQ0=0;MQRankSum=-1.072;QD=24.03;ReadPosRankSum=-0.136;VQSLOD=5.0993;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,6:7:18.05:199,18,0	1/1:1,0:6:14.36:83,14,0	0/0:7,0:7:7.20:0,7,72	0/0:5,0:5:9:0,9,78	1/1:3,28:31:68.07:870,68,0	0/0:17,0:17:50.97:0,51,439	0/0:8,0:8:17.98:0,18,156	1/1:8,19:27:32.91:571,33,0	1/1:0,11:11:30.08:332,30,0	1/1:5,25:30:75.10:785,75,0	1/1:8,17:25:38.27:494,38,0	0/0:12,0:12:29.98:0,30,260	0/0:22,0:22:56.93:0,57,483	0/0:14,0:14:35.99:0,36,312	1/1:1,19:20:25.09:505,25,0	1/1:2,10:12:27.07:299,27,0	1/1:3,0:20:36.93:185,37,0	1/1:3,8:11:27.03:281,27,0	1/1:6,17:23:7.79:520,8,0	1/1:5,19:24:54.06:569,54,0	1/1:1,2:3:6.02:66,6,0	0/0:19,0:19:44.99:0,45,391	0/0:14,0:14:41.99:0,42,364	0/0:6,0:6:18:0,18,156	1/1:3,17:20:48.13:531,48,0	1/1:2,25:27:75.19:822,75,0	1/1:2,38:40:67.20:970,67,0	1/1:0,2:2:6.02:66,6,0
chr10	27199651	.	T	TA	8844.86	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-14.119;DP=582;FS=1.935;HRun=9;HaplotypeScore=55.1295;InbreedingCoeff=0.9840;MQ=75.14;MQ0=0;MQRankSum=-1.037;QD=25.34;ReadPosRankSum=-0.908;VQSLOD=5.2622;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,16:22:39.11:431,39,0	0/0:10,0:10:29.99:0,30,260	0/0:18,0:18:23.97:0,24,211	0/0:6,0:6:8.90:0,9,68	1/1:4,28:32:81.14:867,81,0	0/0:18,0:18:50.98:0,51,440	0/0:14,0:14:30.33:0,30,282	1/1:9,24:33:69.19:763,69,0	1/1:2,16:18:39.11:431,39,0	1/1:7,15:22:22.03:451,22,0	1/1:3,30:33:84.15:902,84,0	0/0:22,0:22:62.97:0,63,543	0/0:41,0:41:99:0,114,986	0/0:17,0:17:38.96:0,39,336	0/0:23,0:23:53.95:0,54,465	1/1:2,21:23:57.15:631,57,0	0/0:25,0:25:59.97:0,60,541	1/1:7,3:10:14.60:155,15,0	1/1:6,15:21:45.12:497,45,0	1/1:2,16:19:50.97:545,51,0	1/1:2,12:14:36.10:398,36,0	0/0:16,0:16:35.97:0,36,310	0/0:13,0:13:32.99:0,33,286	0/0:10,0:10:26.99:0,27,234	1/1:2,25:27:62.43:781,62,0	1/1:2,26:28:78.21:863,78,0	1/1:4,36:38:90.24:996,90,0	1/1:2,5:7:12.03:133,12,0
chr10	27199934	.	AT	A	1161.57	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.056;DP=482;FS=3.677;HRun=8;HaplotypeScore=46.4915;InbreedingCoeff=0.9842;MQ=77.80;MQ0=0;MQRankSum=-1.010;QD=21.92;ReadPosRankSum=1.918;VQSLOD=3.8614;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:81.12:0,81,944	1/1:2,7:9:21.03:203,21,0	0/0:12,0:11:16.64:0,17,171	0/0:13,0:13:32.80:0,33,335	0/0:27,0:27:75.23:0,75,906	0/0:19,0:19:51.16:0,51,616	0/0:9,0:9:24.07:0,24,290	0/0:30,0:30:78.23:0,78,932	0/0:14,0:14:36.11:0,36,435	0/0:13,0:13:36.10:0,36,424	0/0:21,0:21:63.19:0,63,761	0/0:14,0:14:39.08:0,39,455	0/0:23,0:23:66.20:0,66,794	0/0:23,0:23:69.21:0,69,834	1/1:1,22:23:60.10:579,60,0	0/0:19,0:19:51.14:0,51,605	1/1:2,19:21:54.08:521,54,0	0/0:11,0:11:30.09:0,30,361	0/0:15,0:15:42.13:0,42,507	0/0:17,0:17:42.13:0,42,505	0/0:10,0:10:18.06:0,18,217	0/0:11,0:11:33.10:0,33,399	0/0:20,0:20:57.13:0,57,672	0/0:8,0:8:24.07:0,24,290	0/0:14,0:14:39.12:0,39,471	0/0:20,0:20:60.17:0,60,715	0/0:32,0:31:84.26:0,84,1011	0/0:5,0:5:15.05:0,15,181
chr10	27200108	.	GGA	G	624.19	PASS	AC=4;AF=0.074;AN=54;BaseQRankSum=5.450;DP=453;FS=0.000;HRun=0;HaplotypeScore=71.0415;InbreedingCoeff=0.9630;MQ=76.66;MQ0=1;MQRankSum=0.081;QD=27.14;ReadPosRankSum=1.695;VQSLOD=4.5906;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:36:0,36,540	1/1:1,6:7:18.06:235,18,0	0/0:24,0:22:22.80:0,23,630	0/0:22,0:19:26.49:0,26,327	0/0:20,0:20:57.19:0,57,935	0/0:18,0:18:51.16:0,51,837	0/0:12,0:12:30.10:0,30,508	0/0:23,0:23:54.15:0,54,795	0/0:12,0:12:33.11:0,33,555	0/0:16,0:16:42.12:0,42,619	0/0:26,0:26:72.25:0,72,1216	0/0:13,0:13:39.08:0,39,629	0/0:20,0:20:51.17:0,51,864	0/0:15,0:15:36.12:0,36,605	0/0:17,0:17:45.14:0,45,729	0/0:17,0:17:45.14:0,45,728	1/1:2,14:16:39.13:509,39,0	./.	0/0:18,0:18:48.16:0,48,772	0/0:20,0:20:57.18:0,57,925	0/0:9,0:9:24.08:0,24,399	0/0:12,0:12:36.11:0,36,584	0/0:20,0:20:48.12:0,48,730	0/0:21,0:21:57.13:0,57,859	0/0:19,0:19:51.07:0,51,864	0/0:21,0:21:51.17:0,51,838	0/0:14,0:14:42.12:0,42,653	0/0:3,0:3:9.03:0,9,153
chr10	27200402	.	G	GT	7673.30	PASS	AB=1.000;AC=32;AF=0.571;AN=56;BaseQRankSum=-11.859;DP=508;FS=9.953;HRun=9;HaplotypeScore=48.8771;InbreedingCoeff=0.8662;MQ=67.03;MQ0=1;MQRankSum=-0.483;QD=21.74;ReadPosRankSum=0.087;VQSLOD=4.9190;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,8:11:20.47:231,20,0	0/0:4,0:4:12:0,12,104	0/1:11,0:9:0.64:1,0,72	0/1:10,0:7:10.99:11,0,58	1/1:6,22:29:42.89:659,43,0	0/0:21,0:21:59.99:0,60,520	0/0:8,0:8:20.98:0,21,179	1/1:7,22:29:43.10:686,43,0	1/1:3,19:22:54.14:591,54,0	1/1:6,17:24:53.96:568,54,0	1/1:5,29:34:81.18:883,81,0	0/0:11,0:11:32.98:0,33,284	0/0:15,0:15:44.97:0,45,384	0/0:11,0:11:23.99:0,24,208	0/0:18,0:18:25.81:0,26,383	1/1:6,16:22:16.06:405,16,0	0/0:16,0:16:47.99:0,48,417	1/1:2,11:13:17.72:177,18,0	1/1:7,18:26:33.74:542,34,0	1/1:3,21:24:14.62:566,15,0	1/1:4,2:6:12.01:120,12,0	0/0:15,0:16:47.01:0,47,393	0/0:25,0:25:50.88:0,51,433	0/0:10,0:10:26.99:0,27,234	1/1:4,18:22:31.10:571,31,0	1/1:5,22:27:66.16:719,66,0	1/1:3,25:28:37.12:638,37,0	1/1:3,10:13:7.04:306,7,0
chr10	27201305	.	A	AT	699.58	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=0.520;DP=619;FS=1.932;HRun=2;HaplotypeScore=58.7452;InbreedingCoeff=0.9977;MQ=78.59;MQ0=0;MQRankSum=-0.577;QD=33.31;ReadPosRankSum=0.490;VQSLOD=3.5605;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:72.21:0,72,879	1/1:2,10:12:30.10:432,30,0	0/0:17,0:17:42.09:0,42,488	0/0:11,0:11:24.08:0,24,298	0/0:31,0:31:90.27:0,90,1104	0/0:23,0:23:66.21:0,66,817	0/0:15,0:15:42.13:0,42,521	0/0:29,0:29:84.25:0,84,1030	0/0:16,0:16:42.10:0,42,495	0/0:25,0:25:72.22:0,72,883	0/0:26,0:26:75.24:0,75,929	0/0:17,0:17:48.15:0,48,595	0/0:23,0:23:69.22:0,69,855	0/0:29,0:29:84.26:0,84,1040	0/0:28,0:28:81.24:0,81,992	0/0:25,0:25:66.21:0,66,818	1/1:0,9:9:27.09:389,27,0	0/0:11,0:11:30.09:0,30,370	0/0:25,0:25:63.18:0,63,767	0/0:33,0:33:90.28:0,90,1113	0/0:26,0:26:72.23:0,72,893	0/0:27,0:27:78.25:0,78,967	0/0:20,0:20:54.15:0,54,656	0/0:20,0:20:57.17:0,57,694	0/0:12,0:12:36.11:0,36,446	0/0:33,0:33:99:0,99,1217	0/0:40,0:40:99:0,114,1412	0/0:12,0:12:36.11:0,36,446
chr10	27202024	.	A	AAAAC	16977.76	PASS	AB=1.000;AC=33;AF=0.589;AN=56;BaseQRankSum=-14.288;DP=663;FS=1.172;HRun=0;HaplotypeScore=96.5149;InbreedingCoeff=0.9221;MQ=68.34;MQ0=3;MQRankSum=-0.128;QD=39.76;ReadPosRankSum=0.587;VQSLOD=5.0242;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,8:16:29.77:654,30,0	0/0:11,0:11:24.08:0,24,389	0/0:24,0:17:20.99:0,21,299	0/1:15,0:14:30.63:31,0,43	1/1:11,25:38:72.25:1744,72,0	0/0:30,0:30:66.23:0,66,1065	0/0:19,0:19:39.13:0,39,632	1/1:21,12:34:21.18:913,21,0	1/1:7,11:19:33.11:799,33,0	1/1:11,17:29:60.16:1344,60,0	1/1:12,24:36:69.24:1644,69,0	0/0:21,0:21:51.17:0,51,827	0/0:17,0:17:36.12:0,36,583	0/0:22,0:22:51.15:0,51,779	1/1:8,22:30:51.18:1236,51,0	1/1:5,19:24:48.16:1163,48,0	0/0:16,0:16:40.93:0,41,604	1/1:5,4:8:15.05:355,15,0	1/1:16,9:28:42.14:942,42,0	1/1:4,13:19:42.14:948,42,0	1/1:9,11:21:24.08:581,24,0	0/0:28,0:28:69.22:0,69,1087	0/0:30,0:30:69.24:0,69,1110	0/0:18,0:18:30.10:0,30,486	1/1:6,16:22:42.14:1018,42,0	1/1:10,21:31:63.20:1442,63,0	1/1:17,23:42:60.11:1438,60,0	1/1:1,12:13:30.10:727,30,0
chr10	27202600	.	CAT	C	12566.61	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=10.054;DP=486;FS=0.348;HRun=0;HaplotypeScore=60.5595;InbreedingCoeff=0.9905;MQ=82.38;MQ0=0;MQRankSum=-2.114;QD=40.54;ReadPosRankSum=2.142;VQSLOD=6.7806;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,10:10:30.10:459,30,0	0/0:10,0:10:30.10:0,30,579	0/0:19,0:19:54.19:0,54,1041	0/0:9,0:9:27.06:0,27,484	1/1:1,29:30:81.28:1239,81,0	0/0:11,0:11:33.11:0,33,637	0/0:10,0:10:30.09:0,30,545	1/1:1,32:33:90.28:1332,90,0	1/1:0,13:13:36.12:551,36,0	1/1:1,21:22:60.18:875,60,0	1/1:1,29:30:78.17:1143,78,0	0/0:15,0:15:45.11:0,45,761	0/0:22,0:22:66.18:0,66,1174	0/0:19,0:19:57.17:0,57,1056	0/0:13,0:13:36.11:0,36,654	1/1:0,17:17:45.15:689,45,0	0/0:10,0:10:27.09:0,27,515	1/1:0,10:10:24.08:361,24,0	1/1:0,16:16:48.12:690,48,0	1/1:1,22:23:60.20:909,60,0	1/1:0,13:13:36.12:551,36,0	0/0:7,0:7:21.07:0,21,405	0/0:22,0:22:66.20:0,66,1208	0/0:9,0:9:27.09:0,27,521	1/1:0,23:23:54.18:826,54,0	1/1:1,29:30:87.26:1289,87,0	1/1:0,34:34:99:1515,99,0	1/1:2,4:6:9.03:138,9,0
chr10	27204204	.	T	TG	17369.42	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-8.154;DP=568;FS=4.513;HRun=6;HaplotypeScore=53.5576;InbreedingCoeff=0.9968;MQ=75.79;MQ0=0;MQRankSum=-8.142;QD=32.96;ReadPosRankSum=4.666;VQSLOD=4.8724;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,30:31:84.27:1051,84,0	1/1:2,11:13:36.11:449,36,0	0/0:21,1:21:54.02:0,54,526	0/0:19,0:19:35.05:0,35,325	1/1:2,28:30:84.27:1056,84,0	1/1:2,16:18:45.14:566,45,0	1/1:1,20:21:48.15:604,48,0	1/1:3,28:31:81.02:908,81,0	1/1:2,11:13:30.10:377,30,0	1/1:2,18:20:51.16:641,51,0	1/1:1,25:26:66.21:830,66,0	1/1:2,10:12:30.10:377,30,0	1/1:0,14:14:36.12:452,36,0	1/1:0,13:13:33.11:415,33,0	1/1:1,16:17:48.15:604,48,0	1/1:1,22:23:63.20:793,63,0	1/1:2,15:17:36.58:501,37,0	1/1:3,23:26:66.21:830,66,0	1/1:3,20:23:63.19:782,63,0	1/1:3,21:24:63.20:786,63,0	1/1:0,21:21:60.19:755,60,0	1/1:1,13:14:33.11:415,33,0	1/1:1,16:17:51.16:635,51,0	1/1:1,8:9:24.08:302,24,0	1/1:1,23:24:60.19:753,60,0	1/1:1,23:24:69.22:868,69,0	1/1:0,38:38:99:1319,106,0	1/1:0,8:8:24.08:302,24,0
chr10	27204442	.	AT	A	6986.18	PASS	AB=0.736;AC=50;AF=0.893;AN=56;BaseQRankSum=-3.238;DP=384;FS=8.255;HRun=10;HaplotypeScore=44.5108;InbreedingCoeff=0.6128;MQ=77.26;MQ0=0;MQRankSum=-3.588;QD=19.25;ReadPosRankSum=2.559;VQSLOD=5.4470;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,8:9:23.98:208,24,0	1/1:1,0:11:16.29:48,16,0	0/1:9,1:9:9.37:9,0,96	0/0:8,0:8:12.71:0,13,147	1/1:1,21:22:59.98:521,60,0	1/1:4,18:22:44.97:391,45,0	0/1:2,7:9:9.19:158,0,9	1/1:2,17:19:44.96:387,45,0	1/1:1,14:15:38.99:339,39,0	1/1:1,7:8:21:182,21,0	1/1:2,13:15:41.99:364,42,0	1/1:2,5:7:12:104,12,0	1/1:1,8:9:23.99:208,24,0	1/1:0,2:2:6:52,6,0	0/0:13,0:13:30.08:0,30,332	1/1:2,13:15:32.99:287,33,0	1/1:0,0:16:28.52:84,29,0	1/1:1,12:13:32.99:286,33,0	1/1:3,11:14:29.95:252,30,0	1/1:4,10:14:32.01:266,32,0	1/1:2,10:12:23.99:208,24,0	1/1:2,11:13:32.99:287,33,0	1/1:4,15:19:41.96:365,42,0	1/1:1,10:11:26.99:234,27,0	1/1:3,15:18:44.99:391,45,0	1/1:4,15:20:44.98:391,45,0	1/1:1,28:29:80.98:703,81,0	1/1:1,10:11:29.99:260,30,0
chr10	27205983	.	G	GT	1013	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-5.847;DP=652;FS=1.586;HRun=1;HaplotypeScore=64.2660;InbreedingCoeff=0.9954;MQ=60.47;MQ0=1;MQRankSum=1.279;QD=30.70;ReadPosRankSum=2.182;VQSLOD=3.4616;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:90.24:0,90,1123	1/1:0,7:7:18.06:270,18,0	0/0:25,0:20:36.25:0,36,539	0/0:24,1:18:49.37:0,49,599	0/0:30,0:30:78.13:0,78,990	0/0:31,0:31:93.29:0,93,1193	0/0:16,0:16:45.11:0,45,544	0/0:35,0:35:99:0,102,1309	0/0:17,0:17:51.17:0,51,662	0/0:35,0:35:99:0,99,1270	0/0:29,0:28:78.25:0,78,1011	0/0:15,0:15:45.15:0,45,584	0/0:25,0:25:66.21:0,66,851	0/0:17,0:17:51.17:0,51,662	0/0:20,0:20:60.18:0,60,763	0/0:20,0:20:60.19:0,60,776	1/1:2,24:26:36.70:863,37,0	0/0:21,0:21:60.15:0,60,746	0/0:23,0:23:66.21:0,66,857	0/0:34,0:34:98.89:0,99,1255	0/0:18,0:18:54.18:0,54,701	0/0:24,0:24:69.21:0,69,880	0/0:15,0:15:45.06:0,45,562	0/0:19,0:19:54.18:0,54,701	0/0:21,0:21:60.15:0,60,746	0/0:29,0:29:87.27:0,87,1114	0/0:31,0:31:84.10:0,84,1065	0/0:13,0:13:30.09:0,30,389
chr10	27206988	.	G	GCC	4424.61	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-6.655;DP=416;FS=3.342;HRun=8;HaplotypeScore=54.3270;InbreedingCoeff=0.9693;MQ=84.12;MQ0=2;MQRankSum=-2.286;QD=24.58;ReadPosRankSum=0.929;VQSLOD=3.8772;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,20:25:48.12:733,48,0	0/0:11,0:11:27.06:0,27,301	0/0:33,0:32:52.17:0,52,760	0/0:16,0:15:21.02:0,21,219	1/1:5,10:16:24.08:372,24,0	0/0:15,0:15:42.10:0,42,468	0/0:19,0:19:51.13:0,51,568	1/1:1,3:6:11.29:92,11,0	1/1:1,9:11:30.10:457,30,0	1/1:3,6:10:14.51:172,15,0	1/1:2,4:7:8.47:76,8,0	0/0:21,0:21:57.15:0,57,635	0/0:11,0:12:17.99:0,18,259	0/0:17,0:17:45.09:0,45,493	0/0:22,0:23:56.89:0,57,614	1/1:1,6:8:17.55:247,18,0	0/0:25,0:25:69.15:0,69,760	1/1:1,8:9:21.07:333,21,0	1/1:5,8:13:21.04:300,21,0	1/1:5,4:10:17.55:245,18,0	1/1:4,12:17:27.09:429,27,0	0/0:16,0:16:42.11:0,42,468	0/0:14,0:14:24.03:0,24,268	0/0:14,0:14:42.09:0,42,458	1/1:3,8:13:20.55:279,21,0	1/1:3,6:10:15.03:213,15,0	1/1:4,8:13:18.04:286,18,0	1/1:4,6:10:12.04:190,12,0
chr10	27207662	.	C	CT	4853.76	PASS	AB=1.000;AC=46;AF=0.920;AN=50;BaseQRankSum=-0.806;DP=219;FS=0.000;HRun=8;HaplotypeScore=40.3984;InbreedingCoeff=0.3740;MQ=63.05;MQ0=4;MQRankSum=-1.408;QD=23.34;ReadPosRankSum=0.903;VQSLOD=4.8443;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,19:21:45.13:506,45,0	./.	0/0:4,0:4:3:0,3,27	0/1:8,0:4:14.62:21,0,15	1/1:1,6:7:15.04:169,15,0	1/1:2,13:15:36.11:415,36,0	1/1:2,15:17:39.07:435,39,0	1/1:3,9:12:26.81:243,27,0	./.	1/1:3,2:5:8.92:83,9,0	1/1:3,8:11:21.06:233,21,0	1/1:1,9:10:27.08:308,27,0	1/1:0,7:7:18.05:207,18,0	1/1:0,3:3:9.03:104,9,0	0/1:2,0:2:0:0,0,0	1/1:1,5:6:15.04:169,15,0	./.	1/1:1,7:8:20.94:205,21,0	1/1:2,7:9:18.05:202,18,0	1/1:0,6:6:12.03:133,12,0	1/1:0,6:6:12.03:130,12,0	1/1:1,4:5:9.91:106,10,0	1/1:2,7:8:21.06:242,21,0	1/1:0,2:2:3.01:35,3,0	1/1:0,10:8:21.06:233,21,0	1/1:3,9:10:27.08:302,27,0	1/1:0,8:8:24.07:270,24,0	1/1:1,5:6:9.03:101,9,0
chr10	27207890	.	CT	C	2148.20	PASS	AB=0.734;AC=42;AF=0.778;AN=54;BaseQRankSum=0.304;DP=336;FS=35.424;HRun=14;HaplotypeScore=40.7230;InbreedingCoeff=0.0250;MQ=53.66;MQ0=22;MQRankSum=-1.107;QD=6.57;ReadPosRankSum=3.561;VQSLOD=-0.0320;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:11,17:28:21.68:135,22,0	./.	0/0:6,0:5:5.95:0,6,42	0/1:10,0:6:11.74:12,0,30	0/1:5,7:11:7.48:66,0,7	1/1:10,5:22:30.74:168,31,0	1/1:6,3:10:14.99:79,15,0	0/1:23,10:27:30.35:163,0,30	1/1:2,10:12:17.82:123,18,0	1/1:6,9:14:22.58:136,23,0	1/1:2,2:4:2.90:20,3,0	1/1:0,4:4:11.90:82,12,0	1/1:2,4:6:10.96:68,11,0	1/1:3,3:11:19.89:99,20,0	1/1:1,0:1:2.04:6,2,0	1/1:2,9:13:22.86:150,23,0	1/1:3,0:8:12.22:36,12,0	1/1:8,10:20:26.93:164,27,0	0/1:11,4:10:16.02:50,0,16	0/0:3,0:2:0:0,0,0	1/1:5,3:9:10.92:67,11,0	1/1:0,1:1:2.98:21,3,0	0/1:8,1:10:10.27:22,0,10	0/1:4,2:10:12.78:44,0,13	0/1:6,7:11:5.40:67,0,5	1/1:4,7:11:23.73:162,24,0	1/1:1,17:18:29.73:205,30,0	0/1:4,12:13:1.06:138,0,1
chr10	27210701	.	C	CA	752.74	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-3.153;DP=594;FS=6.224;HRun=7;HaplotypeScore=53.9696;InbreedingCoeff=0.9560;MQ=72.11;MQ0=0;MQRankSum=-1.750;QD=25.09;ReadPosRankSum=-1.179;VQSLOD=3.7203;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:30.03:0,30,284	1/1:3,10:13:30.09:362,30,0	0/0:14,0:14:12.80:0,13,188	0/0:9,0:10:10.97:0,11,182	0/0:28,0:28:72.11:0,72,695	0/0:23,0:23:63.10:0,63,608	0/0:14,0:14:42.07:0,42,406	0/0:31,0:31:72.07:0,72,678	0/0:21,0:21:60.09:0,60,579	0/0:28,0:28:69.10:0,69,666	0/0:29,0:29:84.10:0,84,799	0/0:18,0:18:51.08:0,51,493	0/0:22,0:22:54.04:0,54,510	0/0:31,0:31:81.11:0,81,776	0/0:23,0:23:66.09:0,66,631	0/0:22,0:22:66.09:0,66,632	1/1:2,15:17:19.27:510,19,0	0/0:16,0:16:33.04:0,33,319	0/0:20,0:20:45.06:0,45,434	0/0:25,0:25:66.10:0,66,637	0/0:23,0:23:69.07:0,69,653	0/0:18,0:18:51.07:0,51,487	0/0:25,0:25:63.09:0,63,608	0/0:6,0:6:15:0,15,138	0/0:36,0:36:87.12:0,87,835	0/0:24,0:24:66.10:0,66,637	0/0:30,0:30:72.11:0,72,695	0/0:14,0:14:42.07:0,42,406
chr10	27211223	.	GTTT	G	7194.15	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=3.301;DP=481;FS=4.012;HRun=14;HaplotypeScore=106.2423;InbreedingCoeff=0.9494;MQ=72.41;MQ0=1;MQRankSum=-1.592;QD=22.34;ReadPosRankSum=2.755;VQSLOD=4.2260;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,4:5:5.99:70,6,0	1/1:0,6:7:18.52:212,19,0	0/0:10,0:8:14.64:0,15,143	0/0:13,0:12:8.53:0,9,133	1/1:5,29:37:69.13:781,69,0	0/0:5,0:18:32.43:0,32,305	0/0:3,0:10:26.26:0,26,241	1/1:9,19:29:54.12:569,54,0	1/1:2,11:14:17.93:193,18,0	1/1:3,29:32:79.88:876,80,0	1/1:2,20:23:26.06:451,26,0	0/0:3,0:17:41.37:0,41,323	0/0:7,0:20:50.85:0,51,474	0/0:5,0:11:32.92:0,33,266	0/0:6,0:17:13.89:0,14,31	1/1:1,19:21:51.05:579,51,0	1/1:2,10:12:24.03:281,24,0	1/1:1,3:4:6.02:70,6,0	1/1:2,14:17:38.77:397,39,0	1/1:3,22:27:52.42:581,52,0	1/1:2,14:17:32.94:353,33,0	0/0:4,0:15:41.85:0,42,383	0/0:4,0:14:18.24:0,18,156	0/0:3,0:13:17.43:0,17,120	1/1:1,13:15:38.92:406,39,0	1/1:4,14:21:40.39:453,40,0	1/1:6,23:31:59.14:678,59,0	1/1:0,9:9:21.06:245,21,0
chr10	27211872	.	T	TA	462.41	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-0.362;DP=440;FS=0.750;HRun=9;HaplotypeScore=43.7290;InbreedingCoeff=0.9209;MQ=79.21;MQ0=0;MQRankSum=-0.735;QD=15.41;ReadPosRankSum=1.950;VQSLOD=3.3047;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:29.99:0,30,260	1/1:0,1:8:19.88:99,20,0	0/0:12,0:12:26.98:0,27,234	0/0:12,0:11:21.43:0,21,176	0/0:30,0:30:83.96:0,84,725	0/0:27,0:27:71.98:0,72,625	0/0:19,0:19:53.99:0,54,469	0/0:22,0:23:64.95:0,65,538	0/0:17,0:17:38.88:0,39,326	0/0:16,0:16:41.96:0,42,360	0/0:21,0:21:62.96:0,63,541	0/0:15,0:15:35.95:0,36,306	0/0:18,0:18:50.95:0,51,434	0/0:13,0:13:26.97:0,27,230	1/1:1,14:15:38.86:431,39,0	0/0:15,0:15:41.98:0,42,365	1/1:2,0:7:14.20:71,14,0	0/0:8,0:8:20.99:0,21,182	0/0:19,0:19:44.98:0,45,391	0/0:24,0:24:59.97:0,60,518	0/0:5,0:5:15:0,15,130	0/0:10,0:10:29.36:0,29,241	0/0:9,0:9:26.99:0,27,234	0/0:13,0:13:38.99:0,39,338	0/0:18,0:18:44.95:0,45,382	0/0:20,0:20:50.97:0,51,443	0/0:19,0:19:50.99:0,51,443	0/0:15,1:16:2.80:0,3,253
chr10	27212067	.	AG	A	347.32	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-1.161;DP=399;FS=1.043;HRun=5;HaplotypeScore=64.4794;InbreedingCoeff=0.8165;MQ=71.40;MQ0=0;MQRankSum=0.496;QD=23.15;ReadPosRankSum=0.906;VQSLOD=2.6053;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:33.08:0,33,416	0/0:5,0:5:15.05:0,15,204	0/0:6,0:6:5.67:0,6,29	0/0:7,0:7:15.90:0,16,135	0/0:28,0:28:84.25:0,84,1110	0/0:17,0:17:51.10:0,51,666	0/0:6,0:6:18.04:0,18,227	0/0:24,0:24:69.19:0,69,859	0/0:15,0:15:39.10:0,39,499	0/0:23,0:23:69.19:0,69,871	0/0:19,0:19:54.16:0,54,703	0/0:12,0:12:36.11:0,36,473	0/0:11,0:11:33.10:0,33,432	0/0:15,0:15:45.14:0,45,595	1/1:0,15:15:39.11:442,39,0	0/0:16,0:16:45.15:0,45,612	0/0:11,0:11:30.08:0,30,385	0/0:13,0:13:27.44:0,27,303	0/0:9,0:9:27.08:0,27,354	0/0:19,0:19:57.15:0,57,728	0/0:9,0:9:27.08:0,27,350	0/0:4,0:4:12.04:0,12,163	0/0:9,0:9:17.88:0,18,291	0/0:4,0:4:12.04:0,12,163	0/0:17,0:17:48.13:0,48,607	0/0:26,0:26:75.19:0,75,984	0/0:34,0:34:99:0,99,1325	0/0:13,0:13:36.10:0,36,469
chr10	27214054	.	C	CATTG	1533.85	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-6.683;DP=582;FS=1.755;HRun=0;HaplotypeScore=89.1361;InbreedingCoeff=0.9749;MQ=93.41;MQ0=0;MQRankSum=-4.473;QD=63.91;ReadPosRankSum=1.956;VQSLOD=5.9001;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:60.21:0,60,1119	1/1:1,12:13:39.06:935,39,0	0/0:22,0:22:60.21:0,60,1083	0/0:28,0:28:72.23:0,72,1282	0/0:22,0:22:63.22:0,63,1176	0/0:26,0:26:75.26:0,75,1383	0/0:20,0:20:51.17:0,51,952	0/0:29,0:29:84.27:0,84,1534	0/0:21,0:21:63.20:0,63,1145	0/0:32,0:32:81.27:0,81,1483	0/0:23,0:23:66.22:0,66,1195	0/0:20,0:20:57.20:0,57,1064	0/0:16,0:16:48.15:0,48,864	0/0:23,0:23:66.21:0,66,1200	0/0:23,0:23:69.24:0,69,1288	0/0:22,0:22:60.19:0,60,1074	1/1:2,9:11:27.09:720,27,0	0/0:9,0:9:27.09:0,27,491	0/0:22,0:22:54.14:0,54,882	0/0:31,0:31:84.29:0,84,1557	0/0:9,0:9:27.06:0,27,441	0/0:26,0:26:66.21:0,66,1191	0/0:26,0:26:78.27:0,78,1456	0/0:5,0:5:15.05:0,15,280	0/0:21,0:21:63.22:0,63,1176	0/0:20,0:20:54.19:0,54,1008	0/0:35,0:35:99:0,105,1864	0/0:4,0:4:12.04:0,12,224
chr10	27215323	.	T	TA	11709.48	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-4.576;DP=632;FS=8.935;HRun=9;HaplotypeScore=81.5710;InbreedingCoeff=0.9810;MQ=78.54;MQ0=1;MQRankSum=-6.581;QD=19.98;ReadPosRankSum=4.336;VQSLOD=5.1296;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,28:35:77.88:825,78,0	1/1:1,1:15:31.95:167,32,0	0/0:18,0:17:32.92:0,33,272	0/0:28,0:28:50.61:0,51,397	1/1:3,25:28:69.19:763,69,0	1/1:1,1:25:48.46:260,48,0	1/1:4,1:13:22.73:114,23,0	1/1:8,24:32:72.14:767,72,0	1/1:0,16:16:42.11:465,42,0	1/1:5,27:33:81.04:867,81,0	1/1:5,18:23:45.04:481,45,0	1/1:4,0:29:59.72:300,60,0	1/1:4,1:25:45.41:227,45,0	1/1:3,0:21:45.36:225,45,0	1/1:1,27:28:62.84:697,63,0	1/1:3,19:22:39.04:431,39,0	1/1:0,0:24:48.29:241,48,0	1/1:1,4:5:12.03:132,12,0	1/1:3,23:27:72.14:774,72,0	1/1:2,19:22:33.91:571,34,0	1/1:2,17:19:45.12:498,45,0	1/1:1,0:21:49.53:255,50,0	1/1:6,1:24:48.11:252,48,0	1/1:2,0:11:22.73:114,23,0	1/1:1,17:18:48.13:531,48,0	1/1:3,18:21:51.13:558,51,0	1/1:2,26:27:69.19:763,69,0	1/1:7,13:20:39.11:432,39,0
chr10	27215504	.	TAC	T	4512.11	PASS	AB=0.862;AC=32;AF=0.615;AN=52;BaseQRankSum=2.979;DP=680;FS=3.181;HRun=0;HaplotypeScore=112.3399;InbreedingCoeff=0.4492;MQ=57.75;MQ0=13;MQRankSum=-0.778;QD=9.21;ReadPosRankSum=1.854;VQSLOD=4.7447;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:32,17:48:86.10:919,86,0	0/0:4,0:10:0:0,0,0	./.	./.	1/1:16,16:35:23.73:230,24,0	0/0:25,0:25:35.47:0,35,491	0/0:23,0:23:45.13:0,45,641	1/1:21,3:23:23.40:232,23,0	0/1:6,5:11:17.90:28,0,18	1/1:6,11:16:36.10:408,36,0	1/1:6,19:26:14.71:131,15,0	0/1:26,1:27:25.96:26,0,424	0/0:17,1:17:6.33:0,6,347	0/1:16,0:16:10.56:11,0,290	0/0:7,0:23:27:0,27,252	0/1:8,14:22:3.89:182,0,4	0/0:26,0:27:15.04:0,15,133	1/1:17,4:21:4.02:229,4,0	1/1:8,5:15:20.64:172,21,0	1/1:5,14:19:26.90:284,27,0	1/1:21,33:54:35.77:371,36,0	0/1:27,1:28:50.29:50,0,465	0/0:24,1:25:13.27:0,13,729	0/1:31,2:32:44.16:44,0,720	1/1:23,5:29:48.85:474,49,0	1/1:11,8:22:41.70:368,42,0	1/1:12,7:19:15.14:237,15,0	1/1:6,9:16:12.34:116,12,0
chr10	27215632	.	TACAC	T	1200.35	PASS	AB=0.796;AC=15;AF=0.288;AN=52;BaseQRankSum=3.749;DP=661;FS=12.963;HRun=0;HaplotypeScore=120.9697;InbreedingCoeff=0.4880;MQ=48.86;MQ0=26;MQRankSum=1.532;QD=5.86;ReadPosRankSum=0.140;VQSLOD=1.9219;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:17.71:0,18,178	0/0:9,0:8:8.11:0,8,75	./.	./.	0/0:23,0:23:32.91:0,33,453	1/1:13,10:23:14.39:158,14,0	1/1:18,0:18:3.89:131,4,0	0/0:43,0:34:3.85:0,4,99	0/0:26,0:25:41.92:0,42,588	0/0:23,0:23:20.93:0,21,287	0/0:24,0:24:26.96:0,27,536	1/1:15,9:24:23.56:310,24,0	0/1:12,6:19:4.55:82,0,5	1/1:13,4:18:1.07:129,1,0	1/1:6,8:14:6.58:221,7,0	0/0:17,0:17:23.83:0,24,351	0/1:15,1:17:23.76:24,0,91	0/0:10,0:9:12.04:0,12,274	0/0:13,0:11:15.02:0,15,199	0/0:18,0:18:27.06:0,27,441	0/0:49,0:46:53.89:0,54,718	0/1:15,8:23:61.78:156,0,62	0/1:11,6:16:0.12:0,0,0	0/1:27,2:30:6.41:148,0,6	0/0:21,0:21:14.35:0,14,124	0/0:27,0:27:29.86:0,30,270	0/0:8,0:8:12.01:0,12,187	0/0:12,0:12:23.97:0,24,315
chr10	27215818	.	AT	A	16114.94	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=1.225;DP=641;FS=12.841;HRun=7;HaplotypeScore=69.7938;InbreedingCoeff=0.9727;MQ=71.63;MQ0=1;MQRankSum=-5.725;QD=26.68;ReadPosRankSum=4.852;VQSLOD=4.5039;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,22:23:60.13:612,60,0	1/1:0,9:9:27.06:275,27,0	0/0:20,0:18:33.63:0,34,398	0/0:17,0:15:12.17:0,12,170	1/1:1,43:44:99:1245,123,0	1/1:0,28:28:75.17:765,75,0	1/1:1,12:13:33.07:337,33,0	1/1:2,28:30:84.19:857,84,0	1/1:4,23:27:57.13:582,57,0	1/1:5,21:25:60.13:612,60,0	1/1:4,27:31:75.13:754,75,0	1/1:0,12:12:33.08:337,33,0	1/1:1,27:28:72.16:735,72,0	1/1:2,21:23:60.12:612,60,0	1/1:2,18:20:45.10:459,45,0	1/1:0,27:27:75.17:765,75,0	1/1:0,19:19:54.08:540,54,0	1/1:1,8:10:20.08:190,20,0	1/1:2,20:22:57.13:582,57,0	1/1:0,41:41:99:1181,117,0	1/1:0,14:14:39.09:398,39,0	1/1:1,21:22:60.14:612,60,0	1/1:1,31:32:87.20:888,87,0	1/1:1,13:14:36.08:367,36,0	1/1:0,22:22:57.13:582,57,0	1/1:1,24:25:69.14:698,69,0	1/1:3,34:37:96.22:979,96,0	1/1:0,5:5:15.03:153,15,0
chr10	27217718	.	G	GAA	4516.55	PASS	AB=0.871;AC=25;AF=0.446;AN=56;BaseQRankSum=6.699;DP=452;FS=11.214;HRun=3;HaplotypeScore=102.2284;InbreedingCoeff=-0.7751;MQ=50.07;MQ0=8;MQRankSum=-3.648;QD=11.15;ReadPosRankSum=1.703;VQSLOD=0.8671;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:12,4:15:99:273,0,107	0/1:9,0:9:39.53:40,0,199	0/0:16,0:4:8.96:0,9,76	0/0:25,0:8:16.02:0,16,182	0/1:27,0:27:99:291,0,289	0/1:10,12:22:36.74:587,0,37	0/1:10,1:11:54.05:58,0,54	0/1:31,0:28:35.69:36,0,733	0/1:8,2:10:99:193,0,197	0/1:14,9:23:99:389,0,476	0/1:10,5:15:99:240,0,410	0/1:8,1:10:66.43:124,0,66	0/1:12,3:16:77.84:287,0,78	0/1:14,3:17:99:147,0,106	0/1:4,0:4:7.89:8,0,82	0/1:19,0:19:21.46:21,0,207	0/1:16,0:16:55.93:56,0,121	0/1:12,0:12:72.54:73,0,251	0/1:12,7:18:99:202,0,420	0/1:15,8:23:99:368,0,559	0/1:4,0:4:33.82:34,0,82	0/1:8,1:9:35.45:123,0,35	0/1:8,3:13:43.90:313,0,44	0/1:10,1:11:6.79:88,0,7	0/1:23,0:23:99:100,0,277	0/1:11,10:21:99:464,0,355	0/1:22,0:22:2.08:2,0,322	0/0:5,0:5:9.01:0,9,137
chr10	27217726	.	AAGAG	A	2461.15	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=1.852;DP=444;FS=0.518;HRun=0;HaplotypeScore=114.0687;InbreedingCoeff=0.8741;MQ=49.73;MQ0=9;MQRankSum=-1.297;QD=22.17;ReadPosRankSum=2.677;VQSLOD=3.5583;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:14:17.59:0,18,389	0/0:10,0:10:20.57:0,21,339	0/0:16,0:4:5.05:0,5,70	0/0:27,0:8:11.81:0,12,253	0/0:24,0:24:39.12:0,39,791	1/1:19,4:23:11.53:376,12,0	1/1:10,2:11:20.25:260,20,0	0/0:32,0:28:54.17:0,54,1130	0/0:9,0:9:18.51:0,19,375	0/0:20,0:20:57.20:0,57,1139	0/0:16,0:16:39.53:0,40,676	1/1:8,2:10:0.56:351,1,0	1/1:11,5:16:34.98:493,35,0	1/1:15,3:18:37.24:480,37,0	0/0:4,0:4:9.03:0,9,224	0/0:18,0:18:30.08:0,30,550	0/0:15,0:15:14.96:0,15,238	0/0:12,0:11:29.97:0,30,493	0/0:14,0:13:30.55:0,31,554	0/0:24,0:24:60.22:0,60,1165	0/0:2,0:2:6.02:0,6,132	1/1:6,3:9:16.13:244,16,0	1/1:8,5:13:20.12:357,20,0	1/1:4,6:10:7.67:92,8,0	0/0:24,0:24:48.04:0,48,963	0/0:22,0:22:60.24:0,60,1038	0/0:24,0:24:39.10:0,39,802	0/0:5,0:5:15.03:0,15,288
chr10	27217730	.	G	GAAAGAA	4375.22	PASS	AB=1.000;AC=26;AF=0.464;AN=56;BaseQRankSum=10.283;DP=445;FS=6.232;HRun=0;HaplotypeScore=122.0892;InbreedingCoeff=-0.0000;MQ=50.00;MQ0=9;MQRankSum=-4.227;QD=13.38;ReadPosRankSum=-0.478;VQSLOD=3.5470;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:17,0:16:97.27:97,0,399	0/0:9,0:9:11.58:0,12,336	0/1:15,0:4:8.05:8,0,68	0/0:27,0:8:18.99:0,19,257	0/1:24,0:24:11.70:12,0,736	1/1:15,7:22:49.57:970,50,0	0/1:10,0:10:3.85:136,0,4	0/0:31,0:27:51.64:0,52,1260	0/1:8,0:8:70.12:70,0,344	0/1:21,0:21:99:209,0,943	0/1:16,0:16:99:152,0,670	1/1:10,1:11:26.41:252,26,0	1/1:16,1:17:36.67:528,37,0	1/1:19,0:19:42.48:311,42,0	0/0:3,0:3:9.03:0,9,191	0/1:18,0:18:67.11:67,0,455	0/0:16,0:16:17.33:0,17,289	0/1:12,0:11:28.36:28,0,430	0/1:14,0:13:99:117,0,588	0/1:25,0:25:99:254,0,1063	0/0:2,0:2:6.02:0,6,147	1/1:9,0:9:16.06:186,16,0	1/1:11,2:13:11.13:392,11,0	0/1:10,0:10:10.41:34,0,10	0/1:25,0:25:74.69:75,0,567	0/1:21,0:21:99:477,0,684	0/0:25,0:25:28.60:0,29,702	0/0:5,0:5:15.03:0,15,285
chr10	27217770	.	AAGAG	A	464.63	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.014;DP=435;FS=19.096;HRun=0;HaplotypeScore=90.4327;InbreedingCoeff=0.7562;MQ=50.97;MQ0=5;MQRankSum=-3.714;QD=12.91;ReadPosRankSum=-1.026;VQSLOD=1.4565;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:24:16.18:0,16,818	1/1:1,10:11:21.03:352,21,0	0/0:15,0:2:6.02:0,6,79	0/0:15,0:2:3.01:0,3,37	0/0:17,0:17:51.01:0,51,1028	0/0:16,0:16:26.98:0,27,467	0/0:7,0:7:18.03:0,18,357	0/0:25,0:23:55.73:0,56,1310	0/0:10,0:10:30.06:0,30,424	0/0:20,0:20:57.15:0,57,1359	0/0:11,0:11:33.10:0,33,761	0/0:10,0:10:26.98:0,27,502	0/0:16,0:16:30.01:0,30,592	0/0:16,0:17:42.02:0,42,837	0/0:11,0:11:33.11:0,33,831	0/0:13,0:13:27.08:0,27,623	1/1:5,19:25:8.36:225,8,0	0/0:15,0:16:9.99:0,10,410	0/0:13,0:11:33.10:0,33,776	0/0:22,0:22:66.23:0,66,1597	0/0:8,0:8:6.89:0,7,207	0/0:10,0:10:24:0,24,399	0/0:8,0:8:18.06:0,18,392	0/0:12,0:12:11.07:0,11,163	0/0:24,0:24:63.22:0,63,1555	0/0:13,0:13:36.11:0,36,879	0/0:30,0:30:72.16:0,72,1462	0/0:14,0:14:42.13:0,42,962
chr10	27217782	.	GAAGAAAGAAAGAAAGAAAGA	G	750.20	PASS	AB=0.916;AC=11;AF=0.212;AN=52;BaseQRankSum=4.651;DP=462;FS=12.469;HRun=0;HaplotypeScore=217.4346;InbreedingCoeff=0.2734;MQ=51.58;MQ0=6;MQRankSum=-3.372;QD=6.47;ReadPosRankSum=-2.079;VQSLOD=1.4060;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:27:29.91:0,30,911	0/0:5,0:9:18.06:0,18,620	./.	./.	0/0:18,0:18:30.10:0,30,1720	1/1:7,10:17:3.01:159,3,0	0/1:9,0:8:76.49:76,0,121	0/0:24,0:22:13.60:0,14,375	0/0:3,0:12:21.07:0,21,1207	0/0:22,0:22:24.08:0,24,1448	0/0:13,0:13:27.09:0,27,1613	1/1:7,3:10:3.01:159,3,0	0/1:8,0:19:11.67:110,0,12	0/1:16,0:17:41.61:171,0,42	0/0:12,0:12:30.10:0,30,2024	0/0:14,0:14:21.07:0,21,995	0/0:23,0:24:18.53:0,19,886	0/1:17,0:16:18.15:18,0,1251	0/0:23,0:19:29.46:0,29,1813	0/0:23,0:23:39.13:0,39,2248	0/0:5,0:9:15.05:0,15,670	1/1:5,7:12:6.02:71,6,0	0/0:5,0:9:7.20:0,7,83	0/1:15,0:15:62.35:128,0,62	0/0:20,0:24:51.18:0,51,2421	0/0:15,0:15:36.12:0,36,1858	0/0:30,0:30:60.21:0,60,3113	0/0:14,0:14:39.13:0,39,2425
chr10	27217797	.	GA	G	182.57	PASS	AB=0.889;AC=3;AF=0.056;AN=54;BaseQRankSum=6.135;DP=448;FS=0.000;HRun=3;HaplotypeScore=72.9994;InbreedingCoeff=-0.0650;MQ=52.00;MQ0=6;MQRankSum=-5.048;QD=4.56;ReadPosRankSum=0.528;VQSLOD=0.2247;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:30:21.14:0,21,639	0/0:9,0:9:11.26:0,11,63	./.	0/0:6,0:1:3.01:0,3,42	0/0:19,0:19:54.17:0,54,747	0/0:14,0:14:9.70:0,10,164	0/0:9,0:8:10.04:0,10,95	0/0:27,0:21:57.66:0,58,794	0/0:12,0:12:17.75:0,18,131	0/0:17,0:17:48.15:0,48,662	0/0:12,0:12:33.11:0,33,472	0/0:9,0:9:12.69:0,13,205	0/1:15,0:15:1.43:1,0,112	0/1:8,8:16:99:250,0,242	0/0:14,0:14:42.14:0,42,593	0/0:16,0:16:45.15:0,45,628	0/0:23,0:23:29.17:0,29,446	0/0:15,0:14:34.74:0,35,484	0/0:24,0:21:60.20:0,60,846	0/0:25,0:25:69.23:0,69,976	0/0:11,0:11:22.27:0,22,261	0/0:11,0:11:17.72:0,18,235	0/1:9,0:9:19.01:19,0,192	0/0:14,0:14:14.22:0,14,159	0/0:26,0:26:72.15:0,72,854	0/0:18,0:18:52.42:0,52,722	0/0:27,0:27:78.26:0,78,1105	0/0:15,0:15:45.15:0,45,640
chr10	27217801	.	GA	G	204.33	PASS	AB=0.819;AC=3;AF=0.054;AN=56;BaseQRankSum=6.282;DP=464;FS=0.000;HRun=3;HaplotypeScore=69.5015;InbreedingCoeff=-0.0391;MQ=52.02;MQ0=7;MQRankSum=-2.783;QD=5.84;ReadPosRankSum=-0.200;VQSLOD=0.2168;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:31:24.42:0,24,695	0/0:10,0:10:14.27:0,14,104	0/0:5,0:1:2.22:0,2,7	0/0:4,0:1:3.01:0,3,42	0/0:18,0:18:54.18:0,54,762	0/0:14,0:14:7.71:0,8,161	0/1:4,6:9:65.80:130,0,66	0/0:31,0:25:69.69:0,70,938	0/0:15,0:15:23.73:0,24,199	0/0:19,0:19:54.18:0,54,760	0/0:11,0:11:33.10:0,33,454	0/0:8,0:8:4.60:0,5,119	0/0:15,0:15:4.67:0,5,97	0/0:17,0:17:23.11:0,23,319	0/0:15,0:15:42.14:0,42,592	0/0:15,0:15:45.15:0,45,628	0/0:23,0:23:24.90:0,25,471	0/0:15,0:14:42:0,42,539	0/0:26,0:21:63.20:0,63,860	0/0:25,0:25:72.24:0,72,1014	0/0:14,0:14:31.34:0,31,401	0/1:10,0:10:49.84:50,0,188	0/0:11,0:11:19.73:0,20,287	0/1:12,3:15:99:123,0,110	0/0:26,0:26:72.12:0,72,821	0/0:18,0:18:52.42:0,52,724	0/0:27,0:27:81.25:0,81,1107	0/0:15,0:15:42.14:0,42,600
chr10	27218722	.	TAG	T	921.86	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.673;DP=702;FS=0.000;HRun=0;HaplotypeScore=78.2006;InbreedingCoeff=0.9843;MQ=81.69;MQ0=0;MQRankSum=-2.285;QD=34.14;ReadPosRankSum=0.149;VQSLOD=5.7121;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,102,1720	1/1:0,14:14:39.13:546,39,0	0/0:26,0:26:63:0,63,982	0/0:26,0:26:72.18:0,72,1163	0/0:28,0:28:84.21:0,84,1364	0/0:30,0:30:84.22:0,84,1392	0/0:25,0:25:75.20:0,75,1224	0/0:39,0:39:99:0,105,1787	0/0:24,0:24:69.24:0,69,1229	0/0:28,0:27:81.28:0,81,1455	0/0:18,0:18:48.16:0,48,856	0/0:18,0:18:51.17:0,51,914	0/0:24,0:24:69.22:0,69,1201	0/0:19,0:19:57.18:0,57,997	0/0:29,0:29:75.23:0,75,1292	0/0:18,0:18:54.17:0,54,943	1/1:0,13:13:36.12:498,36,0	0/0:5,0:5:12.04:0,12,213	0/0:16,0:16:48.14:0,48,802	0/0:28,0:28:84.26:0,84,1452	0/0:28,0:28:78.24:0,78,1356	0/0:38,0:38:99:0,108,1904	0/0:30,0:30:81.26:0,81,1417	0/0:22,0:22:63.22:0,63,1119	0/0:24,0:24:69.22:0,69,1201	0/0:34,0:34:99:0,102,1747	0/0:31,0:31:84.25:0,84,1438	0/0:31,0:31:93.26:0,93,1582
chr10	27218984	.	A	AT	14958.47	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-6.302;DP=534;FS=4.912;HRun=7;HaplotypeScore=47.2799;InbreedingCoeff=0.9201;MQ=78.70;MQ0=0;MQRankSum=-6.428;QD=29.27;ReadPosRankSum=3.534;VQSLOD=5.2797;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,17:20:48.15:580,48,0	1/1:1,8:9:24.07:290,24,0	0/0:12,0:12:27.04:0,27,260	0/0:11,0:11:24.03:0,24,227	1/1:3,28:31:52.27:913,52,0	1/1:1,19:20:54.17:652,54,0	1/1:1,14:15:33.10:398,33,0	1/1:9,19:28:57.13:653,57,0	1/1:3,10:13:4.12:333,4,0	1/1:5,25:30:75.23:902,75,0	1/1:2,25:27:69.17:817,69,0	1/1:2,9:11:24.07:290,24,0	1/1:1,20:21:57.17:689,57,0	1/1:2,15:17:39.12:471,39,0	1/1:2,0:17:43.13:219,43,0	1/1:0,20:20:54.17:652,54,0	1/1:1,19:20:54.17:652,54,0	1/1:1,8:9:21.06:253,21,0	1/1:5,11:16:36.07:410,36,0	1/1:3,29:32:84.22:998,84,0	1/1:1,6:7:18.06:217,18,0	1/1:1,13:14:33.10:399,33,0	1/1:1,24:25:66.20:797,66,0	1/1:2,14:16:36.11:435,36,0	1/1:1,23:24:60.18:725,60,0	1/1:3,16:19:48.15:580,48,0	1/1:1,25:26:72.22:869,72,0	1/1:0,24:24:63.19:761,63,0
chr10	27219471	.	TATTATAA	T	19635.95	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=12.582;DP=559;FS=0.000;HRun=0;HaplotypeScore=178.5173;InbreedingCoeff=0.9730;MQ=66.52;MQ0=0;MQRankSum=-16.852;QD=61.55;ReadPosRankSum=-1.683;VQSLOD=4.1865;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,14:17:30.10:790,30,0	0/0:12,0:12:33.11:0,33,1244	0/0:20,0:21:53.73:0,54,1367	0/0:13,0:13:29.25:0,29,1066	1/1:4,32:36:84.12:2088,84,0	0/0:23,0:23:66.20:0,66,2457	0/0:12,0:12:36.11:0,36,1253	1/1:5,22:27:69.19:1655,69,0	1/1:1,18:19:48.12:1205,48,0	1/1:2,24:26:69.19:1714,69,0	1/1:4,26:30:75.15:1855,75,0	0/0:15,0:15:42.14:0,42,1696	0/0:25,0:25:72.25:0,72,2872	0/0:15,0:15:45.15:0,45,1763	0/0:23,0:23:66.23:0,66,2656	1/1:1,18:19:48.16:1265,48,0	0/0:16,0:16:45.13:0,45,1658	1/1:0,3:3:3.01:79,3,0	1/1:1,9:10:27.08:659,27,0	1/1:0,24:24:72.01:1655,72,0	1/1:2,8:10:15.05:395,15,0	0/0:25,0:25:75.26:0,75,2940	0/0:22,0:22:66.23:0,66,2619	0/0:18,0:18:54.19:0,54,2116	1/1:4,19:23:45.15:1186,45,0	1/1:1,34:35:99:2543,102,0	1/1:2,29:31:78.22:1995,78,0	1/1:1,8:9:21.07:553,21,0
chr10	27221409	.	AACAC	A	405.75	PASS	AB=0.942;AC=17;AF=0.354;AN=48;BaseQRankSum=-0.281;DP=477;FS=11.407;HRun=0;HaplotypeScore=82.7182;InbreedingCoeff=0.3175;MQ=64.53;MQ0=9;MQRankSum=0.414;QD=2.47;ReadPosRankSum=1.790;VQSLOD=0.8626;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:33:14.77:37,0,15	0/0:5,0:5:6.02:0,6,96	./.	./.	0/0:11,0:11:2.80:0,3,13	0/0:18,0:18:6.01:0,6,76	0/0:20,0:20:9:0,9,111	0/0:36,0:35:6.23:0,6,19	./.	0/1:12,0:11:6.75:7,0,22	1/1:8,0:10:6.01:74,6,0	0/0:12,0:11:3.01:0,3,44	0/0:11,0:11:5.99:0,6,53	0/0:7,0:6:4.26:0,4,67	0/0:17,0:16:21.05:0,21,338	1/1:7,5:12:3:40,3,0	0/0:35,0:35:45.94:0,46,671	0/1:20,1:21:28.50:147,0,28	1/1:14,5:19:5.97:76,6,0	1/1:10,0:10:3:41,3,0	1/1:28,0:27:3:32,3,0	0/0:13,0:13:3.01:0,3,43	0/0:13,0:13:3.01:0,3,49	0/0:26,0:24:17.99:0,18,234	1/1:7,0:7:3.01:46,3,0	0/0:16,0:15:0.47:0,0,1	1/1:11,0:11:3.01:46,3,0	./.
chr10	27222398	.	A	AT	628.03	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-0.013;DP=600;FS=4.507;HRun=5;HaplotypeScore=55.9605;InbreedingCoeff=0.9913;MQ=64.31;MQ0=1;MQRankSum=-0.585;QD=26.17;ReadPosRankSum=0.657;VQSLOD=3.2558;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:33:93.23:0,93,1000	1/1:1,4:6:15.05:194,15,0	0/0:28,0:24:64.07:0,64,594	0/0:20,0:18:38.56:0,39,383	0/0:27,0:27:78.20:0,78,838	0/0:26,0:26:78.16:0,78,820	0/0:19,0:19:51.11:0,51,540	0/0:27,0:27:72.15:0,72,749	0/0:28,0:28:66.14:0,66,701	0/0:23,0:23:63.15:0,63,671	0/0:26,0:26:72.16:0,72,765	0/0:12,0:12:30.07:0,30,322	0/0:16,0:16:48.12:0,48,516	0/0:17,0:17:51.13:0,51,548	0/0:20,0:20:57.13:0,57,604	0/0:21,0:21:57.13:0,57,605	1/1:2,16:18:42.14:552,42,0	0/0:19,0:19:54.14:0,54,580	0/0:24,0:24:66.15:0,66,701	0/0:30,0:30:84.21:0,84,903	0/0:18,0:18:48.10:0,48,507	0/0:25,0:25:72.18:0,72,774	0/0:20,0:20:57.14:0,57,612	0/0:18,0:18:45.11:0,45,483	0/0:25,0:25:72.17:0,72,767	0/0:19,0:19:54.14:0,54,580	0/0:23,0:23:69.17:0,69,741	0/0:11,0:11:33.08:0,33,355
chr10	27222960	.	GT	G	11147.87	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-5.692;DP=556;FS=3.769;HRun=9;HaplotypeScore=62.0135;InbreedingCoeff=0.9032;MQ=74.44;MQ0=1;MQRankSum=-6.506;QD=22.07;ReadPosRankSum=5.714;VQSLOD=5.3469;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,31:35:48.21:624,48,0	1/1:0,9:9:27.01:247,27,0	0/0:28,1:20:36.09:0,36,464	0/0:22,0:16:5.86:0,6,176	1/1:1,22:23:60.03:545,60,0	1/1:0,15:15:39.01:357,39,0	1/1:5,5:10:8.99:82,9,0	1/1:5,20:25:61.94:538,62,0	1/1:1,20:21:51.03:467,51,0	1/1:5,22:27:66.02:600,66,0	1/1:5,19:24:47.92:427,48,0	1/1:1,11:12:30.02:275,30,0	1/1:0,9:9:18.01:165,18,0	1/1:1,17:18:42.02:384,42,0	1/1:0,17:18:47.06:418,47,0	1/1:2,19:21:57.03:522,57,0	1/1:2,27:29:69.03:631,69,0	1/1:2,11:13:33.01:302,33,0	1/1:4,15:19:45:407,45,0	1/1:1,25:26:72:651,72,0	1/1:1,14:15:33.02:302,33,0	1/1:0,11:11:30.01:274,30,0	1/1:0,31:31:83.99:768,84,0	1/1:1,14:15:42.02:384,42,0	1/1:3,18:21:42.02:384,42,0	1/1:2,25:27:75:678,75,0	1/1:1,22:23:60.03:549,60,0	1/1:1,6:7:18.01:165,18,0
chr10	27225233	.	GA	G	11852.85	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=18.626;DP=589;FS=0.964;HRun=1;HaplotypeScore=87.0552;InbreedingCoeff=0.9994;MQ=87.12;MQ0=0;MQRankSum=-5.218;QD=36.36;ReadPosRankSum=1.438;VQSLOD=5.2016;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,23:25:66.21:857,66,0	0/0:11,0:11:33.10:0,33,505	0/0:23,0:23:62.75:0,63,1006	0/0:24,0:24:70.41:0,70,1018	1/1:0,25:25:63.16:799,63,0	0/0:25,0:24:75.26:0,75,1199	0/0:17,0:17:51.15:0,51,768	1/1:0,17:17:51.16:656,51,0	1/1:0,18:18:48.16:622,48,0	1/1:1,22:23:63.20:814,63,0	1/1:0,15:15:42.14:541,42,0	0/0:14,0:14:42.14:0,42,672	0/0:14,0:14:42.14:0,42,672	0/0:17,0:17:51.17:0,51,803	0/0:34,0:34:99:0,102,1619	1/1:0,24:24:69.22:896,69,0	0/0:22,0:22:66.16:0,66,996	1/1:0,8:8:21.07:273,21,0	1/1:0,23:23:69.22:894,69,0	1/1:0,33:33:93.30:1207,93,0	1/1:0,24:26:72.23:929,72,0	0/0:18,0:18:54.17:0,54,840	0/0:21,0:21:63.21:0,63,1007	0/0:23,0:23:69.24:0,69,1096	1/1:0,20:20:57.19:740,57,0	1/1:0,24:24:69.21:877,69,0	1/1:0,27:27:81.26:1052,81,0	1/1:0,18:18:54.17:696,54,0
chr10	27225665	.	G	GTC	24444.79	PASS	AB=0.536;AC=51;AF=0.911;AN=56;BaseQRankSum=-9.408;DP=738;FS=4.919;HRun=0;HaplotypeScore=89.8699;InbreedingCoeff=0.8156;MQ=62.74;MQ0=15;MQRankSum=4.277;QD=36.38;ReadPosRankSum=6.331;VQSLOD=7.1952;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,21:27:47.82:878,48,0	1/1:1,16:17:21.07:404,21,0	0/0:36,0:20:47.12:0,47,601	0/0:30,0:17:36.88:0,37,520	1/1:1,20:22:36.12:693,36,0	1/1:0,27:27:51.17:981,51,0	1/1:2,21:24:33.11:636,33,0	1/1:3,35:37:99:1431,99,0	1/1:2,26:28:57.08:1097,57,0	1/1:2,19:22:63.13:1017,63,0	1/1:0,22:22:54.19:1040,54,0	1/1:0,22:21:39.13:752,39,0	1/1:0,29:29:63.22:1212,63,0	1/1:0,16:15:36.12:694,36,0	1/1:1,31:31:57.20:1098,57,0	1/1:0,34:34:57.12:1098,57,0	1/1:5,35:40:25.35:1274,25,0	0/1:2,13:15:5.71:214,0,6	1/1:6,16:22:28:681,28,0	1/1:0,35:34:75.26:1444,75,0	1/1:5,51:55:99:2196,114,0	1/1:0,17:19:36.12:687,36,0	1/1:0,10:10:21.07:405,21,0	1/1:2,27:29:50.72:981,51,0	1/1:2,13:15:36.12:693,36,0	1/1:0,19:19:54.12:925,54,0	1/1:2,28:30:63.69:1213,64,0	1/1:1,16:17:32.81:699,33,0
chr10	27226548	.	ATGTGTG	A	4292.27	PASS	AB=0.674;AC=24;AF=0.462;AN=52;BaseQRankSum=2.121;DP=526;FS=26.611;HRun=0;HaplotypeScore=121.8285;InbreedingCoeff=0.4127;MQ=67.37;MQ0=9;MQRankSum=-6.241;QD=14.40;ReadPosRankSum=-0.280;VQSLOD=1.9107;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:19,8:26:17.07:49,0,17	0/0:5,0:8:3.01:0,3,79	0/0:20,0:14:1.25:0,1,3	./.	0/1:7,9:18:2.84:204,0,3	0/0:10,0:20:9.03:0,9,243	0/0:10,0:15:15.52:0,16,355	1/1:18,2:18:4.61:60,5,0	1/1:5,8:13:24.05:429,24,0	1/1:12,14:26:29.96:532,30,0	0/1:12,12:27:22.02:407,0,22	0/0:9,0:15:8.96:0,9,186	0/0:17,0:17:24.50:0,24,398	0/0:8,0:16:18.04:0,18,347	1/1:3,16:20:36.04:631,36,0	1/1:11,12:24:18.90:327,19,0	0/0:26,0:31:39.13:0,39,932	./.	1/1:15,4:19:9.96:157,10,0	0/1:11,13:25:9.66:489,0,10	1/1:9,0:9:2.97:20,3,0	0/0:10,0:20:15.52:0,16,444	0/0:10,0:20:14.55:0,15,286	0/0:6,0:14:12.02:0,12,232	1/1:12,9:22:3.07:404,3,0	1/1:10,7:17:18.51:307,19,0	0/1:16,7:22:50.42:222,0,50	0/1:2,3:6:18.09:56,0,18
chr10	27227710	.	AG	A	696.38	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.389;DP=567;FS=9.393;HRun=1;HaplotypeScore=82.0744;InbreedingCoeff=0.9950;MQ=80.43;MQ0=0;MQRankSum=-3.591;QD=31.65;ReadPosRankSum=3.791;VQSLOD=2.5159;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:63.21:0,63,994	1/1:0,9:9:27.09:351,27,0	0/0:15,0:15:45.15:0,45,708	0/0:29,0:29:84.28:0,84,1304	0/0:27,0:27:81.26:0,81,1267	0/0:29,0:29:87.30:0,87,1388	0/0:14,0:14:42.14:0,42,667	0/0:29,0:29:87.30:0,87,1390	0/0:13,0:13:39.13:0,39,618	0/0:35,0:35:99:0,105,1679	0/0:19,0:19:57.19:0,57,911	0/0:14,0:14:42.14:0,42,672	0/0:12,0:12:36.12:0,36,576	0/0:21,0:21:60.20:0,60,959	0/0:13,0:13:39.13:0,39,623	0/0:19,0:19:57.18:0,57,888	1/1:0,13:13:36.12:467,36,0	0/0:6,0:6:18.03:0,18,260	0/0:17,0:17:51.16:0,51,793	0/0:25,0:25:72.25:0,72,1149	0/0:16,0:16:48.16:0,48,762	0/0:27,0:27:81.28:0,81,1287	0/0:24,0:24:72.25:0,72,1149	0/0:13,0:13:39.13:0,39,620	0/0:20,0:20:60.20:0,60,946	0/0:23,0:23:69.24:0,69,1102	0/0:34,0:34:99:0,102,1628	0/0:30,0:30:90.31:0,90,1421
chr10	27228486	.	GA	G	236.98	PASS	AC=6;AF=0.60;AN=10;BaseQRankSum=0.480;DP=282;FS=0.000;HRun=1;HaplotypeScore=16.8626;MQ=6.06;MQ0=263;MQRankSum=-1.733;QD=12.47;ReadPosRankSum=-0.898;VQSLOD=1.4891;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/0:5,0:1:3.01:0,3,48	./.	./.	./.	./.	./.	./.	./.	./.	1/1:2,1:2:6.01:67,6,0	./.	./.	./.	./.	./.	./.	./.	./.	1/1:1,4:4:6.02:83,6,0	./.	./.	0/0:9,0:1:3.01:0,3,47	./.	1/1:6,5:5:12.04:167,12,0	./.	./.	./.
chr10	27234587	.	AG	A	53.08	PASS	AC=6;AF=0.75;AN=8;BaseQRankSum=-0.727;DP=41;FS=0.000;HRun=1;HaplotypeScore=5.2893;MQ=10.81;MQ0=34;MQRankSum=-0.727;QD=8.85;ReadPosRankSum=0.727;VQSLOD=0.7472;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,1:2:3.01:41,3,0	./.	./.	./.	1/1:1,1:1:3.01:40,3,0	./.	./.	./.	./.	./.	./.	1/1:0,1:1:3.01:41,3,0	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	0/0:0,0:1:2.22:0,2,7	./.	./.	./.
chr10	27235855	.	A	AAC	21548.66	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-0.482;DP=682;FS=1.722;HRun=0;HaplotypeScore=155.2145;InbreedingCoeff=0.9660;MQ=71.41;MQ0=1;MQRankSum=-6.653;QD=35.80;ReadPosRankSum=4.217;VQSLOD=6.6115;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:12,15:28:42.14:681,42,0	1/1:2,9:11:27.09:446,27,0	0/0:33,0:30:61.03:0,61,702	0/0:22,0:20:34.09:0,34,398	1/1:6,40:47:99:1811,114,0	1/1:8,20:28:60.20:968,60,0	1/1:11,11:22:33.11:541,33,0	1/1:11,20:32:66.19:1035,66,0	1/1:0,22:22:57.19:928,57,0	1/1:4,31:36:99:1523,99,0	1/1:4,15:20:48.16:751,48,0	1/1:7,16:23:13.93:717,14,0	1/1:0,16:16:39.13:643,39,0	1/1:5,20:25:63.22:1032,63,0	0/0:25,0:25:66.96:0,67,773	1/1:4,19:23:54.18:866,54,0	1/1:5,14:20:42.14:691,42,0	1/1:6,6:12:14.70:247,15,0	1/1:4,10:14:33.11:540,33,0	1/1:12,24:36:78.27:1268,78,0	1/1:7,24:33:63.22:1032,63,0	1/1:7,18:25:57.19:912,57,0	1/1:7,20:27:63.22:1038,63,0	1/1:1,13:14:33.11:544,33,0	1/1:1,14:15:42.14:692,42,0	1/1:5,28:33:84.26:1336,84,0	1/1:8,27:37:41.05:1160,41,0	1/1:0,3:3:9.03:149,9,0
chr10	27236221	.	CT	C	10102.68	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-0.759;DP=569;FS=7.008;HRun=9;HaplotypeScore=58.9983;InbreedingCoeff=0.8825;MQ=77.38;MQ0=3;MQRankSum=-3.915;QD=19.93;ReadPosRankSum=3.907;VQSLOD=5.3690;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,20:24:51.02:466,51,0	1/1:0,12:12:36.02:329,36,0	0/0:28,0:25:44.85:0,45,438	0/0:18,0:13:21.04:0,21,218	1/1:1,27:28:68.89:612,69,0	1/1:0,17:17:42.02:384,42,0	1/1:1,10:11:27.01:247,27,0	1/1:13,21:34:40.11:474,40,0	1/1:2,18:20:45.02:411,45,0	1/1:2,27:29:17.84:664,18,0	1/1:6,17:23:20.46:359,20,0	1/1:2,6:8:18.01:165,18,0	1/1:0,13:13:39.02:356,39,0	1/1:6,21:27:36.01:329,36,0	0/0:16,0:16:42.12:0,42,484	1/1:0,22:22:48.03:439,48,0	1/1:2,15:17:45.02:411,45,0	1/1:1,6:7:18.01:164,18,0	1/1:3,14:17:38.94:344,39,0	1/1:4,28:32:80.80:710,81,0	1/1:2,13:15:36.02:329,36,0	1/1:7,17:24:39:356,39,0	1/1:5,27:32:74.82:685,75,0	1/1:5,10:15:24.01:219,24,0	1/1:2,15:17:1.44:267,1,0	1/1:1,20:21:59.85:530,60,0	1/1:4,32:36:87.04:795,87,0	1/1:3,3:6:5.99:55,6,0
chr10	27236630	.	A	AT	2369.85	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=11.319;DP=454;FS=5.977;HRun=8;HaplotypeScore=53.1015;InbreedingCoeff=0.8855;MQ=73.45;MQ0=0;MQRankSum=-0.241;QD=23.01;ReadPosRankSum=1.554;VQSLOD=4.3412;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:42.44:0,42,377	0/0:10,0:10:21.01:0,21,192	0/1:10,0:10:10.55:11,0,141	0/0:5,0:5:9:0,9,82	0/0:36,0:36:99:0,99,897	1/1:1,25:25:75.22:866,75,0	1/1:2,5:7:12.04:139,12,0	0/0:35,0:35:84.50:0,84,767	0/0:9,0:9:20.99:0,21,187	0/0:15,0:15:42.02:0,42,384	0/0:32,0:32:90.01:0,90,813	1/1:0,9:9:27.08:312,27,0	1/1:0,9:9:24.07:277,24,0	1/1:2,7:9:21.06:242,21,0	0/0:12,0:12:27.01:0,27,247	0/0:9,0:9:24.01:0,24,220	0/0:20,0:20:57.01:0,57,515	0/0:19,0:19:47.97:0,48,431	0/0:15,0:15:36.01:0,36,329	0/0:24,0:24:69.04:0,69,632	0/0:6,0:6:17.98:0,18,158	1/1:2,11:13:24.07:277,24,0	1/1:0,17:17:33.10:381,33,0	1/1:1,2:3:6.02:69,6,0	0/0:14,0:14:36.02:0,36,330	0/0:31,0:31:81.01:0,81,734	0/0:24,1:24:40.37:0,40,608	0/0:17,0:17:51.03:0,51,467
chr10	27239472	.	C	CCT	14859.28	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-9.611;DP=548;FS=12.101;HRun=0;HaplotypeScore=60.8495;InbreedingCoeff=0.9866;MQ=69.24;MQ0=1;MQRankSum=-1.938;QD=36.87;ReadPosRankSum=1.705;VQSLOD=6.4832;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,27:29:72.24:1173,72,0	1/1:3,8:11:21.07:346,21,0	0/0:17,0:17:11:0,11,373	0/0:10,0:10:12.04:0,12,149	1/1:4,23:28:51.17:834,51,0	0/0:21,0:21:63.19:0,63,779	0/0:7,0:7:21.07:0,21,265	1/1:11,24:37:75.23:1193,75,0	1/1:2,22:25:60.21:997,60,0	1/1:3,15:19:45.14:722,45,0	1/1:3,22:27:54.10:851,54,0	0/0:15,0:15:36.10:0,36,441	0/0:17,0:17:42.13:0,42,530	0/0:7,0:7:18.06:0,18,227	1/1:3,14:17:39.13:648,39,0	1/1:3,15:18:33.11:549,33,0	1/1:4,30:34:75.26:1247,75,0	1/1:1,9:10:27.09:440,27,0	1/1:5,20:25:60.20:959,60,0	1/1:3,21:24:63.15:1015,63,0	1/1:4,13:17:30.10:499,30,0	0/0:21,0:21:45.13:0,45,555	0/0:18,0:18:48.14:0,48,594	0/0:12,0:12:24.08:0,24,303	1/1:4,16:20:45.15:748,45,0	1/1:5,19:24:57.19:942,57,0	1/1:2,24:26:72.25:1197,72,0	1/1:0,11:11:30.10:499,30,0
chr10	27240783	.	AT	A	4559.56	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=16.383;DP=601;FS=16.818;HRun=5;HaplotypeScore=70.5703;InbreedingCoeff=0.9613;MQ=57.62;MQ0=2;MQRankSum=1.024;QD=27.80;ReadPosRankSum=1.692;VQSLOD=3.3122;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:32:90.09:0,90,1149	0/0:12,0:12:30.10:0,30,410	0/0:10,0:3:3.01:0,3,31	0/0:11,0:5:8.97:0,9,79	0/0:30,0:30:87.28:0,87,1174	1/1:1,24:25:66.19:749,66,0	1/1:0,17:17:42.12:476,42,0	0/0:31,0:29:84.28:0,84,1149	0/0:21,0:21:63.19:0,63,834	0/0:22,0:21:63.21:0,63,862	0/0:29,0:29:84.26:0,84,1119	1/1:1,11:12:30.09:340,30,0	1/1:4,16:20:36.10:408,36,0	1/1:0,22:22:54.15:613,54,0	0/0:22,0:22:63.21:0,63,862	0/0:13,0:13:33.08:0,33,405	0/0:27,0:28:75.10:0,75,983	0/0:25,0:26:75.22:0,75,984	0/0:16,0:13:33.11:0,33,451	0/0:29,0:29:81.26:0,81,1093	0/0:12,0:12:36.12:0,36,492	1/1:2,27:29:75.21:851,75,0	1/1:1,23:23:63.18:715,63,0	1/1:0,15:15:36.10:408,36,0	0/0:19,0:19:54.17:0,54,724	0/0:25,0:24:72.24:0,72,985	0/0:35,0:34:93.30:0,93,1246	0/0:14,0:14:39.13:0,39,533
chr10	27241444	.	AT	A	3912.68	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=9.707;DP=497;FS=1.692;HRun=7;HaplotypeScore=84.0433;InbreedingCoeff=0.9855;MQ=79.38;MQ0=0;MQRankSum=-0.647;QD=27.55;ReadPosRankSum=5.080;VQSLOD=3.9967;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:27.09:0,27,340	1/1:1,4:5:9.02:92,9,0	0/0:13,0:14:31.09:0,31,384	0/0:9,0:9:21.06:0,21,253	0/0:37,0:37:99:0,102,1270	1/1:0,28:28:78.14:785,78,0	1/1:0,15:15:45.10:459,45,0	0/0:31,0:31:81.24:0,81,993	0/0:18,0:18:48.13:0,48,588	0/0:26,0:26:75.23:0,75,931	0/0:32,0:32:81.24:0,81,995	1/1:4,14:18:42.05:416,42,0	1/1:0,10:10:27.06:275,27,0	1/1:0,11:11:33.08:337,33,0	0/0:15,0:15:45.14:0,45,564	0/0:19,0:19:54.17:0,54,678	1/1:0,14:14:39.09:398,39,0	0/0:5,0:5:12.04:0,12,151	0/0:12,0:12:36.11:0,36,443	0/0:29,0:29:75.23:0,75,931	0/0:15,0:15:36.12:0,36,453	1/1:0,11:11:30.02:294,30,0	1/1:0,18:18:54.12:551,54,0	1/1:1,11:12:30.06:306,30,0	0/0:17,0:17:51.16:0,51,641	0/0:22,0:22:57.17:0,57,706	0/0:30,0:30:84.26:0,84,1039	0/0:14,0:14:36.12:0,36,453
chr10	27241683	.	TG	T	801.43	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.708;DP=525;FS=0.000;HRun=1;HaplotypeScore=103.4881;InbreedingCoeff=0.9975;MQ=83.41;MQ0=0;MQRankSum=-3.776;QD=34.84;ReadPosRankSum=1.254;VQSLOD=3.4669;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:30.10:0,30,474	1/1:0,13:13:36.12:504,36,0	0/0:16,0:16:45.15:0,45,702	0/0:16,0:16:44.51:0,45,644	0/0:41,0:41:99:0,120,1892	0/0:20,0:20:60.19:0,60,935	0/0:16,0:16:48.15:0,48,743	0/0:33,0:33:99:0,99,1560	0/0:17,0:17:51.16:0,51,789	0/0:27,0:27:81.28:0,81,1294	0/0:29,0:29:87.30:0,87,1387	0/0:8,0:8:24.08:0,24,384	0/0:21,0:21:63.21:0,63,1007	0/0:13,0:13:39.13:0,39,623	0/0:17,0:17:51.17:0,51,813	0/0:11,0:11:33.11:0,33,527	1/1:0,10:10:30.10:419,30,0	0/0:9,0:9:27.06:0,27,404	0/0:17,0:17:51.14:0,51,750	0/0:41,0:41:99:0,123,1933	0/0:14,0:14:42.13:0,42,647	0/0:18,0:18:54.18:0,54,860	0/0:21,0:21:63.21:0,63,1007	0/0:11,0:11:33.09:0,33,503	0/0:18,0:18:54.18:0,54,863	0/0:22,0:22:66.23:0,66,1055	0/0:23,0:22:69.24:0,69,1103	0/0:13,0:13:39.09:0,39,574
chr10	27243210	.	G	GA	3870.83	PASS	AB=0.944;AC=21;AF=0.375;AN=56;BaseQRankSum=-10.766;DP=509;FS=2.347;HRun=7;HaplotypeScore=52.6200;InbreedingCoeff=0.8869;MQ=66.30;MQ0=0;MQRankSum=0.938;QD=25.81;ReadPosRankSum=2.409;VQSLOD=4.3177;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:42.04:0,42,404	1/1:0,10:10:24.07:290,24,0	0/1:16,1:12:10.86:11,0,203	0/0:19,0:16:21.22:0,21,222	0/0:30,0:30:84.12:0,84,805	1/1:2,14:16:42.13:507,42,0	1/1:1,10:11:27.08:326,27,0	0/0:25,0:25:65.57:0,66,612	0/0:13,0:13:36.05:0,36,347	0/0:31,0:31:90.14:0,90,869	0/0:27,0:27:72.09:0,72,689	1/1:1,11:12:24.07:290,24,0	1/1:2,15:17:45.14:543,45,0	1/1:1,11:12:27.08:326,27,0	0/0:14,0:14:39.06:0,39,376	0/0:15,0:15:45.06:0,45,429	1/1:1,14:15:33.10:397,33,0	0/0:16,0:16:24.33:0,24,384	0/0:27,0:27:55.99:0,56,548	0/0:32,0:32:84.13:0,84,811	0/0:1,0:1:3:0,3,29	1/1:0,18:18:48.11:563,48,0	1/1:2,18:20:45.14:544,45,0	1/1:0,2:2:6.02:72,6,0	0/0:28,0:28:81.13:0,81,782	0/0:28,0:28:78.11:0,78,749	0/0:21,0:21:51.08:0,51,492	0/0:12,0:12:24.02:0,24,232
chr10	27244980	.	GA	G	4711.57	PASS	AB=0.545;AC=19;AF=0.339;AN=56;BaseQRankSum=13.856;DP=596;FS=0.716;HRun=7;HaplotypeScore=58.6374;InbreedingCoeff=0.9197;MQ=59.53;MQ0=3;MQRankSum=1.392;QD=24.67;ReadPosRankSum=2.796;VQSLOD=5.2312;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,1:22:40.55:0,41,660	0/1:2,10:12:45.42:215,0,45	0/0:21,1:11:29.95:0,30,325	0/0:18,0:16:45.09:0,45,520	0/0:28,0:28:78.24:0,78,968	1/1:2,22:24:57.13:582,57,0	1/1:1,15:16:36.08:367,36,0	0/0:35,0:35:90.24:0,90,1069	0/0:15,0:15:42.13:0,42,528	0/0:35,0:35:99:0,102,1261	0/0:36,0:36:93.27:0,93,1146	1/1:1,10:11:27.06:275,27,0	1/1:0,17:17:45.10:459,45,0	1/1:4,21:25:63.14:643,63,0	0/0:15,0:15:42.12:0,42,515	0/0:17,0:17:48.14:0,48,591	1/1:2,25:27:72.16:734,72,0	0/0:16,0:16:42.11:0,42,507	0/0:17,0:16:45.11:0,45,539	0/0:31,0:31:84.27:0,84,1056	0/0:24,0:24:69.22:0,69,866	1/1:2,22:24:60.14:612,60,0	1/1:0,23:23:57.08:580,57,0	1/1:1,11:11:24.05:245,24,0	0/0:19,0:19:54.16:0,54,667	0/0:19,0:19:51.16:0,51,641	0/0:20,0:20:57.18:0,57,713	0/0:16,0:16:48.15:0,48,603
chr10	27248752	.	G	GA	2562.30	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-10.282;DP=413;FS=22.388;HRun=7;HaplotypeScore=37.7495;InbreedingCoeff=0.9679;MQ=63.72;MQ0=0;MQRankSum=-1.567;QD=27.26;ReadPosRankSum=-0.196;VQSLOD=1.6786;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:84.11:0,84,804	0/0:5,0:5:12.02:0,12,116	0/0:8,0:8:9.91:0,10,131	0/0:5,0:4:9.01:0,9,87	0/0:26,0:26:66.09:0,66,632	1/1:3,13:16:39.12:471,39,0	1/1:0,5:5:15.05:181,15,0	0/0:22,0:22:51.05:0,51,480	0/0:7,0:7:18.03:0,18,174	0/0:22,0:22:57.06:0,57,541	0/0:19,0:19:51.08:0,51,492	1/1:0,13:13:36.11:435,36,0	1/1:0,16:16:45.14:543,45,0	1/1:3,9:12:21.06:254,21,0	0/0:16,0:16:42.07:0,42,406	0/0:16,0:16:42.06:0,42,406	0/0:17,0:17:45.07:0,45,435	0/0:10,0:10:27.04:0,27,261	0/0:8,0:8:18.03:0,18,173	0/0:15,0:15:42.05:0,42,400	0/0:10,0:10:27.04:0,27,261	1/1:2,11:13:33.10:399,33,0	1/1:2,10:12:26.57:304,27,0	1/1:0,7:7:15.05:181,15,0	0/0:21,0:21:57.07:0,57,546	0/0:23,0:23:60.09:0,60,579	0/0:21,0:21:57.09:0,57,550	0/0:13,0:13:36.05:0,36,348
chr10	27250910	.	CT	C	7640.28	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=10.574;DP=456;FS=11.471;HRun=8;HaplotypeScore=43.9058;InbreedingCoeff=0.9119;MQ=62.85;MQ0=2;MQRankSum=0.218;QD=24.41;ReadPosRankSum=2.057;VQSLOD=4.7807;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,22:24:60.09:579,60,0	0/0:8,0:8:21.06:0,21,254	0/0:6,0:2:6.02:0,6,69	0/0:8,0:6:3.01:0,3,30	1/1:2,22:24:63:589,63,0	0/0:20,0:20:57.17:0,57,688	0/0:7,0:7:21.06:0,21,253	1/1:3,35:38:99:961,102,0	1/1:2,11:13:27.04:261,27,0	1/1:2,25:27:75.06:710,75,0	1/1:0,23:23:66.01:618,66,0	0/0:13,0:13:39.12:0,39,471	0/0:21,0:21:57.15:0,57,665	0/0:13,0:13:33.04:0,33,361	1/1:0,19:19:45.07:435,45,0	1/1:2,25:27:57.09:550,57,0	0/0:22,0:22:63.12:0,63,720	1/1:1,2:3:6.01:58,6,0	1/1:1,17:18:51.07:488,51,0	1/1:1,15:16:42.03:397,42,0	1/1:3,12:15:33.05:319,33,0	0/0:2,0:2:3.01:0,3,36	0/0:18,0:18:48.13:0,48,568	0/0:5,0:5:9.03:0,9,109	1/1:1,14:15:42.07:406,42,0	1/1:0,18:18:54.08:517,54,0	1/1:2,14:16:36.05:348,36,0	1/1:3,14:17:41.47:405,41,0
chr10	27251231	.	CGAGAGA	C	374.79	PASS	AB=0.885;AC=17;AF=0.607;AN=28;BaseQRankSum=2.570;DP=348;FS=4.561;HRun=0;HaplotypeScore=73.9535;InbreedingCoeff=0.2929;MQ=64.48;MQ0=16;MQRankSum=-2.570;QD=3.41;ReadPosRankSum=0.035;VQSLOD=1.3616;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:12,0:12:12.04:0,12,356	./.	0/0:45,0:16:0:0,0,0	1/1:2,0:3:3.01:42,3,0	0/1:20,2:23:35.22:54,0,35	./.	./.	./.	./.	./.	./.	1/1:15,1:16:3.01:60,3,0	1/1:11,2:13:6.02:95,6,0	0/0:10,0:10:6.02:0,6,178	1/1:2,0:3:3.01:42,3,0	0/0:16,0:14:3.01:0,3,89	1/1:12,0:14:3.01:42,3,0	./.	./.	./.	1/1:14,0:14:3.01:59,3,0	1/1:18,0:18:3.01:46,3,0	0/0:14,1:15:2.84:0,3,14	1/1:4,0:6:3.01:42,3,0	./.	./.	./.
chr10	27252206	.	G	GACAC	17633.18	PASS	AB=0.772;AC=31;AF=0.554;AN=56;BaseQRankSum=-6.819;DP=878;FS=3.132;HRun=0;HaplotypeScore=165.2252;InbreedingCoeff=0.7666;MQ=52.36;MQ0=18;MQRankSum=-2.129;QD=32.35;ReadPosRankSum=-1.252;VQSLOD=4.5030;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:24,18:42:13.59:1622,0,14	0/0:1,0:5:5.95:0,6,46	0/0:34,0:5:1.91:0,2,31	0/1:41,0:12:12.84:13,0,47	1/1:14,2:18:35.82:620,36,0	0/0:27,0:27:52.40:0,52,828	0/0:31,0:32:63.04:0,63,834	1/1:62,3:59:50.80:1455,51,0	1/1:23,12:35:95.63:1838,96,0	1/1:23,9:31:66.14:1395,66,0	1/1:9,4:12:27.07:565,27,0	0/0:44,0:46:99:0,111,1739	0/0:37,0:38:99:0,102,1612	0/0:39,0:39:99:0,102,1572	1/1:9,30:42:35.73:1184,36,0	1/1:6,33:42:51.56:1264,52,0	0/0:13,0:27:42.71:0,43,369	1/1:17,11:28:43.56:1058,44,0	1/1:27,3:23:53.77:789,54,0	1/1:6,15:24:29.84:679,30,0	1/1:43,15:59:99:2073,103,0	0/0:18,0:18:36.11:0,36,570	0/0:19,0:19:33.08:0,33,498	0/0:47,0:48:75.83:0,76,1534	1/1:10,7:17:30.10:694,30,0	1/1:17,10:27:60.08:1281,60,0	1/1:14,6:20:48.03:891,48,0	0/1:3,5:8:3.59:211,0,4
chr10	27252316	.	GAC	G	12010.32	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=12.335;DP=761;FS=0.707;HRun=0;HaplotypeScore=106.2017;InbreedingCoeff=0.9960;MQ=57.18;MQ0=16;MQRankSum=-0.167;QD=26.45;ReadPosRankSum=2.285;VQSLOD=6.1334;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,30:33:72.20:936,72,0	1/1:1,7:8:21.07:273,21,0	0/0:37,0:18:35.88:0,36,503	0/0:46,0:26:35.26:0,35,774	1/1:1,10:11:27.09:351,27,0	0/0:18,0:18:54.18:0,54,914	0/0:32,0:32:81.26:0,81,1342	1/1:19,34:48:53.86:1082,54,0	1/1:7,17:24:51.15:647,51,0	1/1:2,15:17:45.15:585,45,0	1/1:4,19:22:42.14:546,42,0	0/0:32,0:32:90.29:0,90,1496	0/0:30,0:30:78.27:0,78,1324	0/0:24,0:24:63.22:0,63,1061	1/1:8,13:20:45.13:571,45,0	1/1:4,29:33:84.27:1091,84,0	1/1:7,20:27:20.58:629,21,0	1/1:6,21:27:36.19:645,36,0	1/1:7,10:14:30.10:390,30,0	1/1:1,19:20:45.15:585,45,0	1/1:10,59:68:99:1780,138,0	0/0:17,0:17:48.16:0,48,809	0/0:21,0:21:63.21:0,63,1057	0/0:49,0:48:99:0,132,2143	1/1:1,15:16:33.11:429,33,0	1/1:4,22:26:63.20:808,63,0	1/1:3,15:17:36.12:467,36,0	1/1:1,7:8:15.05:195,15,0
chr10	27252394	.	T	TAC	10106.61	PASS	AB=0.769;AC=35;AF=0.625;AN=56;BaseQRankSum=-6.107;DP=639;FS=8.557;HRun=0;HaplotypeScore=103.2038;InbreedingCoeff=0.9169;MQ=47.94;MQ0=30;MQRankSum=0.158;QD=27.46;ReadPosRankSum=0.773;VQSLOD=6.2404;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:12,22:32:48.08:731,48,0	1/1:4,1:10:10.43:149,10,0	0/0:52,0:14:16.76:0,17,187	0/0:56,0:15:24.22:0,24,275	1/1:3,7:10:18.06:297,18,0	0/0:15,0:15:27.09:0,27,337	0/0:19,0:19:38.32:0,38,485	1/1:17,18:34:72.23:1129,72,0	1/1:8,12:20:33.10:520,33,0	1/1:3,14:16:41.50:652,42,0	1/1:10,12:21:42.13:660,42,0	0/0:23,0:23:45.12:0,45,537	0/0:17,0:17:32.45:0,32,369	0/0:13,0:13:36.10:0,36,437	1/1:8,11:18:33.09:507,33,0	1/1:11,15:26:23.49:689,23,0	0/1:7,0:10:2.39:88,0,2	1/1:8,14:21:47.19:748,47,0	1/1:9,4:6:9.03:149,9,0	1/1:7,12:19:7.62:616,8,0	1/1:26,36:59:99:1741,114,0	0/0:20,0:20:34.17:0,34,549	0/0:17,0:17:36:0,36,424	0/0:37,0:37:69.17:0,69,833	1/1:5,9:14:26.30:403,26,0	1/1:12,6:16:30.09:450,30,0	1/1:3,10:12:24.08:380,24,0	1/1:1,3:4:12.04:198,12,0
chr10	27252454	.	TACACACAC	T	934.15	PASS	AB=0.940;AC=23;AF=0.442;AN=52;BaseQRankSum=-0.946;DP=338;FS=11.225;HRun=0;HaplotypeScore=100.4460;InbreedingCoeff=0.3860;MQ=46.84;MQ0=25;MQRankSum=1.183;QD=4.74;ReadPosRankSum=-1.145;VQSLOD=0.8097;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:12,2:13:0.47:0,0,1	0/0:4,1:5:0.89:0,1,2	./.	0/1:26,0:7:0:0,0,0	0/0:6,4:10:0:0,0,0	0/0:9,0:7:9.42:0,9,91	0/0:10,0:9:18.03:0,18,252	1/1:23,10:28:4.50:312,4,0	1/1:9,0:9:1.55:4,2,0	1/1:7,0:6:2.84:56,3,0	1/1:15,2:16:8.99:76,9,0	0/0:7,0:7:9.03:0,9,149	0/0:6,0:6:9:0,9,123	./.	0/0:10,0:10:3.01:0,3,100	1/1:7,1:8:6.01:75,6,0	0/1:5,2:7:12.35:63,0,12	0/1:13,0:11:6.65:7,0,59	0/1:7,0:5:2.77:70,0,3	1/1:8,2:10:12.38:150,12,0	1/1:27,0:25:9.13:155,9,0	0/0:12,0:12:6.02:0,6,145	0/0:12,0:12:8.12:0,8,73	0/0:15,0:15:15.94:0,16,266	1/1:11,0:10:6.41:48,6,0	0/1:11,1:11:37.30:37,0,44	1/1:7,1:9:1.92:34,2,0	0/0:4,0:4:6.49:0,6,66
chr10	27253103	.	GAAAA	G	6945.15	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-1.695;DP=520;FS=0.000;HRun=13;HaplotypeScore=79.8517;InbreedingCoeff=0.9139;MQ=49.02;MQ0=24;MQRankSum=-1.851;QD=22.55;ReadPosRankSum=4.623;VQSLOD=3.4674;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,32:37:56.99:830,57,0	0/0:7,0:7:15.05:0,15,361	0/0:20,0:6:17.09:0,17,328	0/0:17,0:3:6.02:0,6,119	1/1:8,23:31:2.74:530,3,0	0/0:5,0:17:14.67:0,15,248	0/0:5,0:14:12:0,12,192	1/1:3,16:15:31.18:411,31,0	1/1:2,12:13:21.06:307,21,0	1/1:3,17:20:45.02:610,45,0	1/1:4,14:16:14.92:179,15,0	0/0:5,0:15:27.09:0,27,531	0/0:4,0:16:18.05:0,18,291	0/0:5,0:9:18.04:0,18,342	1/1:1,10:11:18.05:263,18,0	1/1:2,9:11:15.04:219,15,0	0/0:25,0:26:65.51:0,66,1176	1/1:0,9:9:18.06:257,18,0	1/1:6,9:12:23.96:313,24,0	1/1:4,37:39:80.18:1121,80,0	1/1:4,7:10:18.01:239,18,0	0/0:9,0:20:41.89:0,42,650	0/0:12,0:21:30.49:0,30,515	0/0:9,0:21:33.11:0,33,631	1/1:3,15:17:30.08:439,30,0	1/1:3,25:27:72.61:961,73,0	1/1:4,15:20:18.56:266,19,0	0/0:3,0:2:0:0,0,0
chr10	27254102	.	C	CA	822.55	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-5.493;DP=556;FS=8.813;HRun=8;HaplotypeScore=61.9917;InbreedingCoeff=0.9916;MQ=65.09;MQ0=1;MQRankSum=0.473;QD=24.19;ReadPosRankSum=1.392;VQSLOD=4.2530;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:80.87:0,81,740	1/1:0,6:7:20.89:222,21,0	0/0:23,0:18:47.70:0,48,423	0/0:19,0:16:31.18:0,31,277	0/0:32,0:32:84:0,84,759	0/0:19,0:19:57.03:0,57,522	0/0:15,0:15:44.99:0,45,401	0/0:48,0:48:99:0,132,1200	0/0:13,0:13:36.02:0,36,329	0/0:21,0:21:63.03:0,63,573	0/0:14,0:14:39.01:0,39,357	0/0:17,0:17:38.98:0,39,352	0/0:18,1:19:19.39:0,19,423	0/0:14,0:14:42.02:0,42,384	0/0:24,0:24:66.02:0,66,604	0/0:14,0:14:35.99:0,36,325	1/1:3,24:27:59.26:721,59,0	0/0:16,0:16:45.02:0,45,411	0/0:23,0:23:60:0,60,543	0/0:16,0:16:39.02:0,39,357	0/0:9,0:9:22.57:0,23,196	0/0:10,0:10:24:0,24,220	0/0:17,0:17:45.02:0,45,412	0/0:12,0:12:36.02:0,36,329	0/0:23,0:23:63.01:0,63,571	0/0:23,0:23:60.02:0,60,549	0/0:35,0:35:99:0,99,906	0/0:12,0:12:35.51:0,36,311
chr10	27254641	.	G	GA	3703.88	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-14.254;DP=504;FS=0.404;HRun=7;HaplotypeScore=71.1962;InbreedingCoeff=0.9918;MQ=71.91;MQ0=0;MQRankSum=-0.581;QD=31.39;ReadPosRankSum=1.010;VQSLOD=3.5842;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:54.54:0,55,721	0/0:10,0:10:27.03:0,27,255	0/0:18,0:16:29.56:0,30,296	0/0:15,0:10:21.03:0,21,199	0/0:25,0:25:57:0,57,533	1/1:2,24:26:43.25:805,43,0	1/1:0,8:8:18.06:217,18,0	0/0:31,0:31:75.11:0,75,721	0/0:19,0:19:48.08:0,48,464	0/0:20,0:20:57.09:0,57,547	0/0:20,0:20:60.07:0,60,568	1/1:0,12:12:36.11:435,36,0	1/1:3,18:21:48.15:580,48,0	1/1:0,8:8:24.07:290,24,0	0/0:14,0:14:36.03:0,36,341	0/0:10,0:10:30.05:0,30,290	0/0:20,0:20:54.08:0,54,521	0/0:11,0:11:30.02:0,30,279	0/0:19,0:19:45.07:0,45,435	0/0:32,0:32:84.13:0,84,811	0/0:4,0:4:12.02:0,12,116	1/1:2,13:15:36.11:435,36,0	1/1:0,19:19:51.15:616,51,0	1/1:0,9:9:27.08:326,27,0	0/0:29,0:29:84.12:0,84,806	0/0:19,0:19:48.05:0,48,454	0/0:21,0:20:57.09:0,57,550	0/0:17,0:17:48.08:0,48,463
chr10	27254659	.	G	GA	9493.12	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=-15.004;DP=508;FS=7.404;HRun=8;HaplotypeScore=56.7839;InbreedingCoeff=0.9860;MQ=74.18;MQ0=0;MQRankSum=-2.128;QD=28.94;ReadPosRankSum=1.726;VQSLOD=5.2687;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,21:28:8.42:603,8,0	0/0:10,0:10:24:0,24,215	0/0:20,0:20:43.37:0,43,351	0/0:11,0:7:18.01:0,18,163	1/1:1,26:27:75.22:866,75,0	0/0:28,0:28:53.99:0,54,488	0/0:8,0:8:21.01:0,21,192	1/1:9,23:32:66.18:751,66,0	1/1:1,16:17:45.13:519,45,0	1/1:0,22:22:66.20:762,66,0	1/1:2,21:23:63.19:727,63,0	0/0:13,0:13:36.02:0,36,330	0/0:17,0:17:33.01:0,33,302	0/0:8,0:8:24.01:0,24,220	1/1:2,12:14:36.11:415,36,0	1/1:0,11:11:33.10:381,33,0	0/0:22,0:22:54:0,54,488	1/1:2,10:12:30.09:346,30,0	1/1:3,14:18:47.95:516,48,0	1/1:0,29:29:84.21:955,84,0	1/1:1,5:6:15.04:173,15,0	0/0:14,0:14:39.01:0,39,357	0/0:20,0:20:51.03:0,51,467	0/0:9,0:9:26.97:0,27,239	1/1:3,25:28:63.19:727,63,0	1/1:4,17:22:54.13:610,54,0	1/1:3,21:23:57.17:657,57,0	1/1:1,14:15:42.12:485,42,0
chr10	27255436	.	T	TTTG	380.38	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=1.765;DP=565;FS=2.534;HRun=0;HaplotypeScore=89.5798;InbreedingCoeff=0.8171;MQ=64.30;MQ0=3;MQRankSum=0.948;QD=27.17;ReadPosRankSum=-0.998;VQSLOD=3.5579;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:27.34:0,27,414	0/0:12,0:12:30.10:0,30,411	0/0:21,0:13:8.99:0,9,102	0/0:19,0:12:8.89:0,9,83	0/0:31,0:31:72.23:0,72,969	0/0:20,0:20:42.14:0,42,569	0/0:18,0:18:30:0,30,368	0/0:29,0:29:33.11:0,33,451	0/0:15,0:15:39.12:0,39,520	0/0:28,0:28:48.15:0,48,631	0/0:29,0:29:54.15:0,54,709	0/0:20,0:20:30.09:0,30,395	0/0:17,0:17:27.08:0,27,354	0/0:12,0:12:18.03:0,18,227	1/1:4,9:14:24.08:474,24,0	0/0:19,0:19:25.28:0,25,519	0/0:15,0:16:13.19:0,13,289	0/0:6,0:6:12.01:0,12,144	0/0:16,0:18:33.01:0,33,397	0/0:29,0:29:51.17:0,51,697	0/0:18,0:18:27.09:0,27,371	0/0:21,0:21:39.13:0,39,535	0/0:25,0:25:39.12:0,39,519	0/0:20,0:20:33.10:0,33,437	0/0:18,0:18:42.13:0,42,562	0/0:22,0:22:48.16:0,48,659	0/0:28,0:28:60.18:0,60,806	0/0:19,0:19:12.10:0,12,407
chr10	27257158	.	AAG	A	546.45	PASS	AB=0.968;AC=21;AF=0.375;AN=56;BaseQRankSum=5.579;DP=323;FS=15.277;HRun=0;HaplotypeScore=56.2662;InbreedingCoeff=-0.3964;MQ=43.80;MQ0=14;MQRankSum=-1.852;QD=2.32;ReadPosRankSum=5.010;VQSLOD=-0.0083;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:12,1:12:35.35:80,0,35	1/1:4,0:4:7.11:25,7,0	0/0:13,0:5:3.75:0,4,44	0/1:9,0:6:7.31:7,0,21	0/0:18,0:16:18.21:0,18,145	0/0:12,0:12:17.11:0,17,144	0/0:9,0:8:8.98:0,9,101	0/1:22,1:23:63.52:64,0,204	0/1:7,0:7:12.74:13,0,23	0/1:14,0:12:31.66:73,0,32	0/1:14,1:15:26.73:58,0,27	0/0:13,0:13:3.71:0,4,78	0/1:10,0:10:3.95:4,0,184	0/1:11,0:11:8.05:8,0,82	0/1:16,0:14:9.44:9,0,160	0/1:6,0:6:4.68:37,0,5	0/1:14,0:13:15.79:16,0,77	0/1:8,0:8:6.84:7,0,32	0/1:20,0:19:62.28:62,0,81	0/1:8,2:10:30.33:57,0,30	0/0:7,0:5:5.54:0,6,37	0/0:5,0:5:3.94:0,4,25	0/0:10,0:9:6.48:0,6,164	0/1:3,0:3:3.01:3,0,45	0/1:12,1:13:3.43:55,0,3	0/1:16,0:16:36.24:36,0,58	0/1:16,0:14:7.02:61,0,7	0/1:6,2:7:20.12:20,0,45
chr10	27258878	.	A	ATT	8706.50	PASS	AB=0.563;AC=50;AF=0.893;AN=56;BaseQRankSum=-2.761;DP=606;FS=20.857;HRun=9;HaplotypeScore=90.8355;InbreedingCoeff=0.4933;MQ=74.80;MQ0=3;MQRankSum=-4.253;QD=14.86;ReadPosRankSum=3.208;VQSLOD=1.6512;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,0:20:42.68:152,43,0	1/1:0,0:6:14.97:51,15,0	0/0:12,0:12:17.78:0,18,159	0/0:8,0:8:0.39:0,0,64	1/1:1,1:33:73.70:308,74,0	1/1:1,26:30:74.22:1062,74,0	1/1:2,9:13:21.07:306,21,0	1/1:5,1:35:69.69:293,70,0	1/1:1,0:21:49.91:171,50,0	1/1:9,0:29:50.89:200,51,0	1/1:6,0:24:15.65:116,16,0	1/1:4,18:22:51.17:785,51,0	1/1:3,20:25:51.17:785,51,0	1/1:3,19:24:48.16:738,48,0	1/1:4,0:27:23.50:148,24,0	0/1:3,1:19:9.30:122,0,9	1/1:3,0:24:47.41:163,47,0	1/1:1,0:8:14.62:51,15,0	1/1:5,0:23:45.43:174,45,0	1/1:7,0:36:31.24:196,31,0	1/1:2,0:17:32.32:111,32,0	1/1:1,19:20:53.67:794,54,0	1/1:2,23:25:63.69:970,64,0	1/1:2,9:12:30.10:444,30,0	1/1:4,0:25:49.91:171,50,0	0/1:8,1:28:8.98:153,0,9	1/1:7,0:34:60.54:216,61,0	1/1:0,0:3:7.49:26,7,0
chr10	27259019	.	G	GA	9031.14	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-12.839;DP=566;FS=0.731;HRun=9;HaplotypeScore=55.6702;InbreedingCoeff=0.9966;MQ=81.26;MQ0=0;MQRankSum=-1.092;QD=25.16;ReadPosRankSum=-0.452;VQSLOD=5.2777;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,9:13:27.07:298,27,0	1/1:2,11:13:30.08:332,30,0	0/0:15,0:16:26.77:0,27,220	0/0:22,0:22:32.48:0,32,261	1/1:5,25:30:63.15:686,63,0	0/0:33,1:34:41.79:0,42,592	0/0:12,0:12:32.99:0,33,287	1/1:14,16:30:30.70:545,31,0	1/1:2,17:19:48.13:531,48,0	1/1:7,23:30:66.18:730,66,0	1/1:0,20:21:59.89:616,60,0	0/0:19,1:20:20.81:0,21,410	0/0:29,0:29:77.96:0,78,673	0/0:26,0:26:68.97:0,69,599	1/1:2,13:15:39.11:431,39,0	1/1:2,18:20:53.98:578,54,0	1/1:2,14:15:33.09:365,33,0	1/1:2,5:8:17.85:207,18,0	1/1:3,13:15:39.10:424,39,0	1/1:5,23:29:45.97:718,46,0	1/1:3,17:20:48.13:531,48,0	0/0:12,0:12:35.99:0,36,312	0/0:16,0:16:41.99:0,42,365	0/0:20,0:20:53.99:0,54,469	1/1:2,16:18:45.12:498,45,0	1/1:5,18:23:25.08:505,25,0	1/1:7,22:30:75.50:803,75,0	1/1:0,8:8:21.06:232,21,0
chr10	27259780	.	TA	T	1551.99	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=11.013;DP=427;FS=6.978;HRun=9;HaplotypeScore=42.4348;InbreedingCoeff=0.9826;MQ=79.90;MQ0=0;MQRankSum=-2.320;QD=20.97;ReadPosRankSum=2.360;VQSLOD=4.1280;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:33.07:0,33,359	0/0:11,0:11:30.07:0,30,335	0/0:18,0:18:33.07:0,33,363	0/0:7,0:7:18.01:0,18,190	0/0:26,1:27:53.77:0,54,862	1/1:0,15:15:36.02:329,36,0	1/1:1,10:11:30.01:274,30,0	0/0:35,0:35:75.34:0,75,915	0/0:8,0:8:24.06:0,24,267	0/0:24,0:24:69.19:0,69,783	0/0:18,0:18:51.14:0,51,579	1/1:0,6:6:18.01:165,18,0	1/1:0,13:13:36.02:329,36,0	1/1:2,8:10:21.01:192,21,0	0/0:12,0:12:36.11:0,36,415	0/0:17,0:17:48.12:0,48,541	0/0:16,0:16:48.14:0,48,554	0/0:14,0:14:33.05:0,33,365	0/0:15,0:15:42.12:0,42,483	0/0:18,0:18:48.13:0,48,543	0/0:6,0:6:15.04:0,15,173	1/1:2,4:6:12:110,12,0	1/1:0,9:9:27.01:247,27,0	1/1:0,4:4:12.01:110,12,0	0/0:19,0:19:48.14:0,48,554	0/0:23,0:23:57.14:0,57,634	0/0:28,0:28:78.23:0,78,896	0/0:23,0:23:66.20:0,66,760
chr10	27262418	.	A	AT	4155.93	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-13.042;DP=547;FS=0.805;HRun=7;HaplotypeScore=47.8315;InbreedingCoeff=0.9602;MQ=69.58;MQ0=0;MQRankSum=-0.209;QD=28.86;ReadPosRankSum=1.709;VQSLOD=4.1617;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:45.06:0,45,435	0/0:6,0:6:15.02:0,15,145	0/0:11,0:11:21.03:0,21,203	0/0:4,0:4:6:0,6,56	0/0:26,0:26:72.11:0,72,695	1/1:5,17:22:45.14:544,45,0	1/1:2,8:10:21.06:254,21,0	0/0:32,0:32:78.10:0,78,749	0/0:11,0:11:30.04:0,30,290	0/0:27,0:27:78.13:0,78,753	0/0:19,0:19:48.07:0,48,464	1/1:2,19:21:54.17:652,54,0	1/1:2,20:22:57.17:689,57,0	1/1:2,13:15:7.14:370,7,0	0/0:23,0:23:66.03:0,66,625	0/0:18,0:18:54.08:0,54,518	0/0:21,0:21:60.08:0,60,573	0/0:16,0:16:36.06:0,36,348	0/0:22,0:22:57.04:0,57,531	0/0:45,0:45:99:0,123,1181	0/0:6,0:6:15.02:0,15,145	1/1:2,16:18:42.04:488,42,0	1/1:1,22:23:60.18:725,60,0	1/1:0,13:13:36.11:435,36,0	0/0:28,0:28:75.11:0,75,724	0/0:24,0:24:60.08:0,60,575	0/0:40,0:40:99:0,114,1088	0/0:6,0:6:18.03:0,18,174
chr10	27263888	.	GA	G	345.53	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=6.017;DP=593;FS=3.119;HRun=9;HaplotypeScore=60.9022;InbreedingCoeff=0.6397;MQ=82.20;MQ0=2;MQRankSum=-1.495;QD=10.80;ReadPosRankSum=-2.492;VQSLOD=2.1967;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:84.20:0,84,945	0/0:4,0:4:12.04:0,12,138	0/0:30,0:27:5.64:0,6,360	0/1:13,0:12:3.71:4,0,161	0/0:35,0:35:99:0,99,1097	0/0:19,0:19:54.14:0,54,604	0/0:19,0:19:48.13:0,48,545	0/0:28,0:28:78.23:0,78,900	0/0:22,0:22:66.17:0,66,743	0/0:22,0:22:48.14:0,48,551	0/0:15,0:15:45.12:0,45,511	0/0:18,0:18:51.15:0,51,589	0/0:21,0:21:54.14:0,54,613	0/0:18,0:18:45.11:0,45,500	1/1:2,17:19:48.02:440,48,0	0/0:23,0:23:66.20:0,66,761	0/0:21,0:20:54.15:0,54,614	0/0:20,0:20:57.12:0,57,632	0/0:23,0:23:57.16:0,57,651	0/0:26,0:26:66.16:0,66,740	0/0:21,0:21:57.15:0,57,647	0/0:19,0:19:45.10:0,45,499	0/0:24,0:25:69.01:0,69,756	0/0:25,0:25:63.16:0,63,709	0/0:25,0:25:69.19:0,69,786	0/0:27,0:27:72.17:0,72,789	0/0:20,0:20:57.14:0,57,638	0/0:4,0:4:12.04:0,12,138
chr10	27265760	.	G	GAA	5369.99	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-7.416;DP=558;FS=3.799;HRun=9;HaplotypeScore=81.0209;InbreedingCoeff=0.9833;MQ=80.81;MQ0=0;MQRankSum=-2.509;QD=30.17;ReadPosRankSum=1.023;VQSLOD=5.1998;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:48.08:0,48,494	1/1:1,0:11:27.95:112,28,0	0/0:20,0:20:21.29:0,21,393	0/0:11,0:12:19.12:0,19,192	0/0:38,0:38:93.15:0,93,982	1/1:1,28:30:72.24:1108,72,0	1/1:8,15:24:45.10:649,45,0	0/0:34,0:34:90.18:0,90,950	0/0:19,0:20:44.53:0,45,456	0/0:23,0:23:63.12:0,63,663	0/0:24,0:24:60.11:0,60,628	1/1:1,17:18:42.14:647,42,0	1/1:0,11:12:32.60:471,33,0	1/1:2,15:18:45.10:649,45,0	0/0:19,0:19:48.07:0,48,503	0/0:16,0:16:39.08:0,39,415	1/1:4,0:16:6.98:115,7,0	0/0:14,0:14:39.10:0,39,415	0/0:21,0:21:60.13:0,60,627	0/0:25,0:25:63.12:0,63,662	0/0:9,0:9:18.04:0,18,192	1/1:2,10:13:32.98:411,33,0	1/1:3,19:24:59.69:885,60,0	1/1:2,10:12:21.07:323,21,0	0/0:22,0:22:63.15:0,63,671	0/0:25,0:25:54.07:0,54,575	0/0:28,0:28:51.08:0,51,542	0/0:12,0:12:30.07:0,30,317
chr10	27265811	.	TA	T	5621.49	PASS	AB=0.768;AC=31;AF=0.554;AN=56;BaseQRankSum=-1.677;DP=533;FS=6.347;HRun=11;HaplotypeScore=69.4402;InbreedingCoeff=0.7339;MQ=69.45;MQ0=5;MQRankSum=1.779;QD=17.14;ReadPosRankSum=1.829;VQSLOD=5.9816;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,16:16:47.95:394,48,0	0/0:9,0:9:10.80:0,11,55	0/0:38,0:15:6.42:0,6,126	0/0:26,0:16:14.93:0,15,141	1/1:5,30:35:80.86:663,81,0	0/0:23,0:23:23.35:0,23,426	0/0:17,0:18:41.96:0,42,422	1/1:6,15:21:44.85:358,45,0	1/1:4,12:16:29.96:246,30,0	1/1:4,23:27:61.08:555,61,0	1/1:3,24:27:71.90:589,72,0	0/0:14,0:14:31.62:0,32,317	0/1:7,2:9:25.19:25,0,163	0/0:12,1:13:2.39:0,2,221	0/0:20,0:20:45.10:0,45,472	1/1:3,9:12:20.96:172,21,0	0/0:17,0:17:34.49:0,34,151	0/1:5,10:15:8.02:148,0,8	1/1:2,17:20:49.48:379,49,0	1/1:1,23:25:70.31:555,70,0	1/1:1,5:6:8.99:74,9,0	0/0:8,0:8:18.05:0,18,192	0/1:20,3:23:25.80:26,0,356	0/0:19,0:19:45.11:0,45,479	1/1:5,19:24:56.91:465,57,0	1/1:4,14:18:41.54:330,42,0	1/1:2,21:23:47.94:394,48,0	1/1:0,11:11:29.97:246,30,0
chr10	27265814	.	A	AAT	885.85	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-1.171;DP=538;FS=7.944;HRun=0;HaplotypeScore=98.1068;InbreedingCoeff=0.9733;MQ=70.98;MQ0=5;MQRankSum=-1.446;QD=35.43;ReadPosRankSum=0.090;VQSLOD=5.7688;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:47.94:0,48,413	1/1:2,6:8:21.05:314,21,0	0/0:39,0:16:18.27:0,18,205	0/0:28,0:18:20.71:0,21,194	0/0:34,0:33:95.44:0,95,786	0/0:23,0:23:57.13:0,57,770	0/0:18,0:18:47.77:0,48,630	0/0:23,0:23:59.85:0,60,494	0/0:15,0:15:39:0,39,343	0/0:28,0:28:83.91:0,84,739	0/0:26,0:26:77.48:0,77,646	0/0:13,0:13:33.10:0,33,471	0/0:9,0:9:27.04:0,27,348	0/0:13,0:13:33.02:0,33,416	0/0:21,0:21:63.11:0,63,821	0/0:13,0:13:29.92:0,30,249	1/1:3,14:17:45.05:693,45,0	0/0:14,0:14:27.89:0,28,259	0/0:20,0:20:47.26:0,47,418	0/0:25,0:25:74.69:0,75,620	0/0:6,0:6:12:0,12,106	0/0:8,0:8:24.06:0,24,327	0/0:24,0:24:69.10:0,69,835	0/0:21,0:21:51.15:0,51,738	0/0:23,0:23:62.96:0,63,551	0/0:19,0:19:53.96:0,54,476	0/0:23,0:23:53.96:0,54,469	0/0:11,0:11:29.99:0,30,264
chr10	27266679	.	A	ATAGT	31261.25	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-0.739;DP=518;FS=22.495;HRun=0;HaplotypeScore=88.9675;InbreedingCoeff=0.9676;MQ=66.09;MQ0=3;MQRankSum=-5.133;QD=61.90;ReadPosRankSum=3.063;VQSLOD=4.5521;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,12:12:30.10:820,30,0	1/1:2,8:11:24.04:562,24,0	0/0:7,0:7:15.05:0,15,289	0/0:6,0:6:12.04:0,12,232	1/1:3,35:39:87.30:2349,87,0	1/1:3,20:24:51.18:1393,51,0	1/1:1,11:13:33.11:901,33,0	1/1:7,11:18:39.12:979,39,0	1/1:0,20:20:48.16:1313,48,0	1/1:6,21:30:84.22:1997,84,0	1/1:2,21:24:57.07:1415,57,0	1/1:3,14:17:33.11:899,33,0	1/1:2,18:19:45.15:1230,45,0	1/1:2,15:18:36.12:985,36,0	1/1:1,11:13:27.09:739,27,0	1/1:1,14:18:39.13:1066,39,0	1/1:1,14:16:39.13:1068,39,0	1/1:0,20:21:57.20:1560,57,0	1/1:2,10:12:30.09:762,30,0	1/1:2,28:29:78.02:1850,78,0	1/1:2,13:15:33.06:840,33,0	1/1:1,15:18:42.14:1141,42,0	1/1:1,22:23:60.04:1641,60,0	1/1:0,9:10:18.06:493,18,0	1/1:0,16:20:36.12:985,36,0	1/1:2,24:26:75.24:1906,75,0	1/1:2,22:26:63.22:1708,63,0	1/1:1,8:9:24.08:656,24,0
chr10	27267201	.	AAAAG	A	3884.72	PASS	AB=1.000;AC=38;AF=0.679;AN=56;BaseQRankSum=-1.735;DP=450;FS=10.200;HRun=0;HaplotypeScore=96.4916;InbreedingCoeff=0.3963;MQ=53.75;MQ0=10;MQRankSum=-1.795;QD=10.59;ReadPosRankSum=-4.270;VQSLOD=0.4983;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:9,0:9:0:1,0,0	0/0:7,0:7:21.06:0,21,426	0/0:18,0:6:4.63:0,5,150	0/0:17,0:7:8.78:0,9,82	1/1:22,1:23:9:109,9,0	1/1:2,16:18:17.99:252,18,0	1/1:3,6:9:15.04:216,15,0	0/1:25,0:25:38.19:94,0,38	0/1:15,0:15:32.73:39,0,33	1/1:14,0:14:22.98:142,23,0	1/1:17,0:17:28.19:171,28,0	1/1:16,1:17:44:457,44,0	1/1:13,2:15:41.18:463,41,0	1/1:13,0:13:26.64:301,27,0	0/0:17,0:17:51.16:0,51,1019	0/1:17,0:17:12.56:28,0,13	0/0:23,0:23:48.92:0,49,655	0/1:17,0:16:11.14:11,0,49	1/1:24,0:24:32.87:272,33,0	1/1:23,0:23:28.48:214,28,0	0/1:5,0:5:0:0,0,0	1/1:9,1:9:23.63:231,24,0	1/1:7,11:17:28.77:328,29,0	1/1:0,4:4:6.02:95,6,0	0/1:19,0:19:10.34:105,0,10	1/1:25,0:25:12.91:195,13,0	0/1:19,0:18:42.51:43,0,75	1/1:11,0:11:12.44:115,12,0
chr10	27267202	.	AAAG	A	5436.15	PASS	AB=1.000;AC=47;AF=0.839;AN=56;BaseQRankSum=1.754;DP=452;FS=9.749;HRun=0;HaplotypeScore=84.4395;InbreedingCoeff=0.7680;MQ=53.78;MQ0=10;MQRankSum=-0.724;QD=14.05;ReadPosRankSum=-2.408;VQSLOD=2.7761;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:9,0:9:8.63:44,9,0	0/0:7,0:7:21.06:0,21,350	0/1:18,0:6:8.88:9,0,104	0/0:18,0:7:8.86:0,9,78	1/1:21,2:23:45.12:286,45,0	1/1:17,1:18:18.03:188,18,0	1/1:9,0:9:14.24:126,14,0	1/1:26,0:26:17.02:252,17,0	1/1:15,0:15:18.23:108,18,0	1/1:14,0:14:34.97:265,35,0	1/1:6,11:17:42.62:358,43,0	1/1:17,0:17:42.73:354,43,0	1/1:15,0:15:40.74:373,41,0	1/1:14,0:14:23.89:274,24,0	0/0:17,0:17:51.14:0,51,822	1/1:17,0:17:19.04:121,19,0	0/0:23,0:23:35.16:0,35,550	1/1:17,0:16:15.14:142,15,0	1/1:21,3:24:38.77:426,39,0	1/1:23,1:24:59.50:439,60,0	1/1:5,0:5:2.88:15,3,0	1/1:9,1:9:23.32:201,23,0	1/1:16,1:16:28.08:241,28,0	1/1:4,0:4:6.01:60,6,0	1/1:18,1:19:27.76:295,28,0	1/1:24,1:25:50.03:364,50,0	1/1:19,0:18:10.05:227,10,0	1/1:8,3:11:28.36:265,28,0
chr10	27267203	.	AAG	A	7018	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=1.713;DP=450;FS=9.951;HRun=0;HaplotypeScore=71.8890;InbreedingCoeff=0.8221;MQ=53.87;MQ0=10;MQRankSum=-1.298;QD=19.07;ReadPosRankSum=-1.630;VQSLOD=4.0433;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,9:9:9.03:115,9,0	0/0:7,0:7:21.05:0,21,277	0/0:18,0:6:6.07:0,6,94	0/0:18,0:7:5.13:0,5,60	1/1:19,4:23:48.48:474,48,0	1/1:17,0:17:17.94:142,18,0	1/1:8,0:8:12.44:97,12,0	1/1:25,2:27:48.65:437,49,0	1/1:14,1:15:25.57:224,26,0	1/1:13,2:15:41.24:405,41,0	1/1:15,2:17:44.66:376,45,0	1/1:17,0:17:41.18:340,41,0	1/1:14,0:14:39.67:299,40,0	1/1:13,0:13:21.68:234,22,0	0/0:17,0:17:50.96:0,51,646	1/1:16,1:17:28.62:251,29,0	0/0:22,0:22:3.95:0,4,434	1/1:17,0:16:39.04:279,39,0	1/1:23,2:25:42.01:561,42,0	1/1:21,3:24:64:622,64,0	1/1:0,4:4:3.01:38,3,0	1/1:11,0:10:25.08:192,25,0	1/1:17,0:16:26.75:196,27,0	1/1:4,0:4:5.99:48,6,0	1/1:16,3:19:32.78:425,33,0	1/1:3,22:25:59.67:549,60,0	1/1:18,1:18:37:443,37,0	1/1:10,1:11:29.94:270,30,0
chr10	27267204	.	AG	A	6462.42	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=2.158;DP=449;FS=12.122;HRun=1;HaplotypeScore=67.0338;InbreedingCoeff=0.8535;MQ=55.26;MQ0=10;MQRankSum=-3.215;QD=17.61;ReadPosRankSum=-2.034;VQSLOD=3.4111;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,0:9:8.97:69,9,0	0/0:7,0:7:20.96:0,21,209	0/0:19,0:7:8.83:0,9,87	0/0:17,0:6:8.23:0,8,68	1/1:19,4:23:53.58:396,54,0	1/1:17,0:17:17.61:108,18,0	1/1:8,0:8:4.75:65,5,0	1/1:20,7:27:61.72:448,62,0	1/1:16,0:16:33.42:281,33,0	1/1:14,0:14:41.94:366,42,0	1/1:14,3:17:44.39:303,44,0	1/1:15,2:17:42.22:332,42,0	1/1:11,3:14:36.42:276,36,0	1/1:11,2:13:29.89:226,30,0	0/0:17,0:17:49.62:0,50,495	1/1:17,0:17:33.25:285,33,0	0/0:21,1:22:10.99:0,11,361	1/1:13,4:16:43.86:374,44,0	1/1:23,3:26:49.86:474,50,0	1/1:23,1:24:64.99:516,65,0	1/1:4,0:4:2.99:23,3,0	1/1:11,0:10:22.96:178,23,0	1/1:14,2:15:23.97:162,24,0	1/1:4,0:4:5.88:37,6,0	1/1:18,0:18:32.94:359,33,0	1/1:23,1:24:59.83:493,60,0	1/1:18,1:18:49.44:444,49,0	1/1:11,1:12:29.88:247,30,0
chr10	27270320	.	TAAC	T	5325.65	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=14.731;DP=695;FS=15.216;HRun=0;HaplotypeScore=101.4392;InbreedingCoeff=0.9062;MQ=57.81;MQ0=4;MQRankSum=1.644;QD=26.36;ReadPosRankSum=3.365;VQSLOD=4.0380;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:22.77:0,23,654	0/0:13,0:13:33.11:0,33,657	0/0:21,0:13:10.98:0,11,277	0/0:17,0:9:15.05:0,15,272	0/0:33,1:34:47.61:0,48,1687	1/1:11,17:28:42.14:599,42,0	1/1:6,13:19:27.09:385,27,0	0/0:35,0:35:57.20:0,57,1128	0/0:24,0:24:60.18:0,60,1161	0/0:31,0:31:66.23:0,66,1328	0/0:19,0:19:42.14:0,42,826	1/1:5,14:20:48.16:684,48,0	1/1:6,22:28:57.08:806,57,0	1/1:9,14:23:33.11:470,33,0	0/0:38,1:39:50.52:0,51,1670	0/0:27,0:27:54.15:0,54,1020	0/0:28,0:28:41.88:0,42,791	0/0:22,0:22:33.11:0,33,668	0/0:20,0:17:27.09:0,27,547	0/0:25,0:25:69.24:0,69,1398	0/0:21,0:21:48.16:0,48,959	1/1:7,18:24:45.11:618,45,0	1/1:1,27:28:66.18:918,66,0	1/1:3,25:28:57.19:812,57,0	0/0:30,0:30:84.28:0,84,1623	0/0:28,0:28:72.25:0,72,1458	0/0:36,0:35:93.32:0,93,1864	0/1:3,0:3:33.02:33,0,52
chr10	27271272	.	T	TA	11423.08	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-16.015;DP=665;FS=0.962;HRun=7;HaplotypeScore=61.9697;InbreedingCoeff=0.9961;MQ=63.97;MQ0=0;MQRankSum=3.056;QD=31.73;ReadPosRankSum=1.532;VQSLOD=4.9340;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,18:21:54.17:652,54,0	0/0:8,0:8:24.04:0,24,232	0/0:23,0:22:40.29:0,40,418	0/0:11,0:9:21.01:0,21,198	1/1:3,32:35:70.28:1114,70,0	0/0:26,0:26:66.09:0,66,632	0/0:14,0:14:36.05:0,36,348	1/1:4,22:26:66.20:791,66,0	1/1:4,24:28:75.19:888,75,0	1/1:1,22:23:66.20:791,66,0	1/1:2,37:39:99:1325,111,0	0/0:26,0:26:72.10:0,72,690	0/0:38,0:38:99:0,108,1031	0/0:23,0:23:63.10:0,63,608	0/0:31,0:31:87.14:0,87,840	1/1:5,28:33:84.26:1015,84,0	0/0:42,0:42:99:0,117,1124	1/1:3,8:11:21.06:254,21,0	1/1:3,15:19:44.97:496,45,0	1/1:0,31:31:93.29:1124,93,0	1/1:3,12:16:32.97:377,33,0	0/0:17,0:17:48.08:0,48,464	0/0:39,0:39:99:0,111,1066	0/0:7,0:7:15.02:0,15,145	1/1:0,17:17:48.15:580,48,0	1/1:1,22:23:66.18:784,66,0	1/1:3,26:29:78.24:942,78,0	1/1:1,8:9:24.07:290,24,0
chr10	27272409	.	T	TTGTG	4693.51	PASS	AB=0.823;AC=40;AF=0.833;AN=48;BaseQRankSum=-0.142;DP=516;FS=1.477;HRun=0;HaplotypeScore=127.9090;InbreedingCoeff=-0.0168;MQ=59.51;MQ0=14;MQRankSum=-0.171;QD=11.12;ReadPosRankSum=-1.401;VQSLOD=4.4402;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:20,1:22:3.01:56,3,0	1/1:9,0:12:17.18:116,17,0	./.	./.	1/1:16,2:19:27.46:406,27,0	1/1:17,0:19:12.04:228,12,0	1/1:7,0:7:3.01:41,3,0	1/1:30,0:29:20.47:203,20,0	1/1:10,6:17:23.55:421,24,0	1/1:17,0:16:27.06:434,27,0	0/1:12,3:16:36.13:36,0,41	0/1:8,0:8:0:0,0,0	1/1:16,0:16:18.06:284,18,0	1/1:16,0:17:5.98:100,6,0	1/1:26,0:26:2.97:65,3,0	0/1:14,4:18:26.08:457,0,26	1/1:9,0:10:3.63:15,4,0	1/1:11,3:14:21:398,21,0	1/1:22,3:25:25.89:431,26,0	1/1:13,4:17:9.03:154,9,0	1/1:30,3:32:21:310,21,0	./.	0/0:13,0:14:0:0,0,0	./.	0/1:16,1:17:3.81:211,0,4	1/1:12,0:18:22.47:140,22,0	0/1:13,0:23:57.83:108,0,58	0/1:10,0:15:51.80:79,0,52
chr10	27272468	.	T	TATCTATCTATC	5266.32	PASS	AB=0.975;AC=23;AF=0.411;AN=56;BaseQRankSum=-4.684;DP=560;FS=10.384;HRun=0;HaplotypeScore=207.9144;InbreedingCoeff=-0.1252;MQ=56.78;MQ0=5;MQRankSum=-1.165;QD=13.40;ReadPosRankSum=2.784;VQSLOD=2.9480;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:19,0:19:81.26:81,0,83	0/0:13,0:13:16.37:0,16,245	0/0:28,0:22:18.06:0,18,275	0/0:27,0:20:8.99:0,9,205	0/1:23,0:22:36.02:144,0,36	0/0:19,0:17:23.47:0,23,226	0/0:14,0:14:2.03:0,2,252	1/1:32,0:30:76.09:985,76,0	0/1:23,0:23:10.31:174,0,10	0/1:18,0:18:5.37:591,0,5	0/1:17,0:17:21.37:111,0,21	0/0:10,0:10:8.77:0,9,89	0/1:19,0:19:0.69:1,0,153	0/0:20,0:20:8.80:0,9,96	1/1:24,0:25:17.76:277,18,0	1/1:26,0:28:39.13:781,39,0	0/1:13,0:13:99:114,0,215	0/1:4,4:10:13.98:14,0,75	0/1:21,0:20:88.42:321,0,88	0/1:26,0:25:73.99:74,0,175	0/1:19,0:19:4.14:270,0,4	0/1:15,0:15:15.77:16,0,131	0/0:19,0:16:8.35:0,8,131	1/1:6,0:6:2.50:18,3,0	0/0:7,7:16:1.55:0,2,4	0/1:26,0:25:99:358,0,260	0/1:36,0:35:99:401,0,305	0/1:17,0:17:28.70:537,0,29
chr10	27272476	.	T	TATC	3900.08	PASS	AB=0.937;AC=18;AF=0.321;AN=56;BaseQRankSum=-2.784;DP=524;FS=13.221;HRun=0;HaplotypeScore=138.5952;InbreedingCoeff=-0.3511;MQ=53.35;MQ0=9;MQRankSum=-1.771;QD=11.11;ReadPosRankSum=3.926;VQSLOD=2.4130;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:7,12:19:72.77:73,0,80	0/0:13,0:13:24:0,24,316	0/0:16,0:13:18.06:0,18,275	0/0:17,0:13:9.82:0,10,217	0/1:11,10:20:92.05:92,0,112	0/0:17,0:15:26.66:0,27,309	0/0:14,0:14:4.64:0,5,317	0/1:38,0:30:63.42:813,0,63	0/1:21,0:21:99:166,0,156	0/1:19,0:19:99:408,0,137	0/1:15,0:15:59.99:60,0,201	0/0:10,0:10:11.95:0,12,156	0/0:18,0:18:13.15:0,13,293	0/0:21,0:21:11.79:0,12,142	0/1:23,0:23:64.70:272,0,65	0/1:25,0:25:87.08:87,0,309	0/0:13,0:13:21.79:0,22,287	0/1:9,0:9:10.98:11,0,77	0/1:18,0:17:99:316,0,189	0/1:16,9:25:37.94:38,0,329	0/1:18,0:18:6.50:270,0,7	0/1:16,0:15:16.73:17,0,169	0/0:19,0:16:21.06:0,21,259	1/1:5,0:5:2.94:18,3,0	0/0:15,0:15:12.03:0,12,165	0/1:26,0:25:99:352,0,409	0/1:36,1:36:99:395,0,512	0/1:15,0:15:30.77:513,0,31
chr10	27272479	.	CT	C	3185.32	PASS	AB=0.725;AC=14;AF=0.250;AN=56;BaseQRankSum=-0.604;DP=509;FS=10.586;HRun=1;HaplotypeScore=118.7314;InbreedingCoeff=-0.3358;MQ=49.99;MQ0=12;MQRankSum=-2.544;QD=10.83;ReadPosRankSum=2.557;VQSLOD=1.0133;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:17,1:18:36.87:37,0,81	0/0:14,0:14:27.09:0,27,400	0/0:15,0:11:18.06:0,18,275	0/0:11,0:7:10.08:0,10,214	0/1:18,2:19:39.93:40,0,166	0/0:17,0:15:22.02:0,22,310	0/0:14,0:14:11.40:0,11,322	0/1:17,21:29:99:794,0,146	0/1:11,12:23:99:136,0,219	0/1:8,11:19:99:403,0,313	0/1:11,5:16:56.37:56,0,282	0/0:11,0:11:14.61:0,15,180	0/0:18,0:18:33.56:0,34,376	0/0:22,0:22:14.83:0,15,165	0/1:9,15:24:99:180,0,114	0/1:15,8:23:86.72:87,0,429	0/0:15,0:15:20.29:0,20,400	0/1:9,0:9:10.92:11,0,99	0/1:9,8:16:99:282,0,194	0/0:22,1:22:22.19:0,22,408	0/1:6,9:15:23.74:270,0,24	0/0:16,0:15:19.12:0,19,209	0/0:20,0:17:24.07:0,24,318	0/0:5,0:5:2.04:0,2,6	0/0:13,1:14:15.05:0,15,224	0/1:12,11:22:99:350,0,451	0/1:20,14:33:99:308,0,623	0/1:3,12:15:56.67:386,0,57
chr10	27272483	.	CT	C	907.74	PASS	AB=0.736;AC=9;AF=0.161;AN=56;BaseQRankSum=-0.504;DP=503;FS=7.929;HRun=1;HaplotypeScore=122.8934;InbreedingCoeff=-0.1183;MQ=48.67;MQ0=13;MQRankSum=-0.187;QD=6.58;ReadPosRankSum=1.355;VQSLOD=0.3486;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:18,0:18:6.79:7,0,128	0/0:13,0:13:21.68:0,22,222	0/0:12,0:6:15.05:0,15,229	0/0:11,0:5:6.40:0,6,138	0/0:21,0:20:20.42:0,20,264	0/1:8,9:15:99:185,0,150	0/1:5,9:14:54.88:320,0,55	0/0:35,0:26:48.20:0,48,396	0/0:23,0:23:28.79:0,29,365	0/0:19,0:19:49.03:0,49,511	0/0:17,0:17:29.90:0,30,409	0/1:5,6:11:69.28:69,0,120	0/1:10,8:18:99:221,0,197	0/1:13,7:20:68.73:69,0,97	0/0:24,0:24:30.47:0,30,335	0/0:23,0:23:37.86:0,38,534	0/0:16,0:16:23.26:0,23,347	0/0:9,0:9:12.02:0,12,161	0/0:16,0:15:6.82:0,7,322	0/0:24,0:23:33.10:0,33,505	0/0:17,0:17:23.26:0,23,185	0/1:8,8:15:67.33:67,0,158	0/1:7,12:16:99:102,0,198	0/1:5,0:5:0:0,0,0	0/0:15,0:15:15.05:0,15,224	0/0:23,0:22:57.29:0,57,650	0/0:32,0:31:68.20:0,68,878	0/0:15,0:15:36.05:0,36,290
chr10	27272487	.	CT	C	217.96	PASS	AB=0.842;AC=4;AF=0.071;AN=56;BaseQRankSum=1.700;DP=506;FS=5.184;HRun=1;HaplotypeScore=121.6607;InbreedingCoeff=-0.0857;MQ=49.08;MQ0=14;MQRankSum=-0.672;QD=4.45;ReadPosRankSum=-0.680;VQSLOD=0.1516;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:14.51:0,15,172	0/1:6,7:13:68.75:152,0,69	0/0:10,0:4:12.03:0,12,158	0/1:10,0:5:15.23:15,0,127	0/0:21,0:20:24.07:0,24,346	0/0:18,0:16:23.88:0,24,357	0/0:13,0:13:6.73:0,7,121	0/0:36,0:27:78.17:0,78,965	0/0:22,0:22:33.08:0,33,499	0/0:18,0:18:54.17:0,54,812	0/0:17,0:17:33.55:0,34,492	0/0:11,0:11:13.84:0,14,189	0/0:18,0:18:13.18:0,13,297	0/0:20,0:20:14.26:0,14,171	0/0:23,0:23:32.39:0,32,462	0/0:23,0:23:39.13:0,39,610	0/1:12,4:16:99:147,0,189	0/1:9,0:9:6.95:7,0,124	0/0:17,0:15:38.06:0,38,497	0/0:25,0:24:36.09:0,36,531	0/0:17,0:17:27.08:0,27,391	0/0:17,0:16:25.51:0,26,331	0/0:20,0:17:24.71:0,25,269	0/0:6,0:6:6.02:0,6,92	0/0:15,0:15:21.07:0,21,312	0/0:24,0:23:65:0,65,923	0/0:33,0:32:71.98:0,72,1071	0/0:15,0:15:40.33:0,40,514
chr10	27273574	.	A	AATAT	8676.88	PASS	AC=44;AF=0.846;AN=52;BaseQRankSum=-6.853;DP=270;FS=6.389;HRun=0;HaplotypeScore=47.0290;InbreedingCoeff=0.7327;MQ=72.77;MQ0=1;MQRankSum=-1.576;QD=38.22;ReadPosRankSum=-1.202;VQSLOD=3.8815;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,3:3:6.02:152,6,0	0/0:6,0:6:12.04:0,12,207	./.	0/0:10,0:10:14.46:0,14,126	1/1:3,5:10:18.06:417,18,0	1/1:1,0:17:39.17:178,39,0	1/1:3,0:3:2.80:13,3,0	1/1:16,35:54:99:2741,123,0	1/1:1,6:7:18.06:455,18,0	1/1:7,6:13:18.06:455,18,0	1/1:0,9:8:21.07:530,21,0	1/1:2,0:5:5.60:25,6,0	1/1:0,0:10:27.98:127,28,0	1/1:3,0:14:19.59:89,20,0	0/0:1,0:20:51.06:0,51,475	1/1:1,4:5:9.03:228,9,0	0/0:4,0:4:12.04:0,12,203	1/1:2,2:4:6.02:152,6,0	1/1:3,3:8:18.06:380,18,0	1/1:0,4:4:9.03:227,9,0	1/1:2,4:6:12.04:303,12,0	1/1:0,0:2:2.80:13,3,0	1/1:3,0:9:16.79:76,17,0	1/1:1,0:1:3.01:30,3,0	1/1:3,6:10:20.86:467,21,0	1/1:2,10:14:36.08:786,36,0	1/1:5,13:19:33.11:834,33,0	./.
chr10	27274683	.	A	AG	13846.43	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=11.085;DP=557;FS=10.456;HRun=0;HaplotypeScore=120.0383;InbreedingCoeff=0.9913;MQ=89.69;MQ0=0;MQRankSum=-7.243;QD=41.58;ReadPosRankSum=2.735;VQSLOD=3.6946;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,10:10:21.07:335,21,0	1/1:0,12:12:27.09:431,27,0	0/0:23,0:23:69.20:0,69,929	0/0:23,0:23:66.17:0,66,882	1/1:1,20:21:45.04:693,45,0	0/0:25,0:25:72.24:0,72,1007	0/0:13,0:13:39.12:0,39,530	1/1:1,30:32:84.29:1337,84,0	1/1:2,28:30:81.25:1269,81,0	1/1:0,20:20:54.18:862,54,0	1/1:0,10:10:24.08:362,24,0	0/0:31,0:31:90.29:0,90,1243	0/0:34,0:34:99:0,102,1373	0/0:14,0:14:42.14:0,42,587	1/1:1,27:28:81.28:1292,81,0	1/1:0,26:26:75.26:1198,75,0	1/1:0,6:6:12.04:192,12,0	1/1:0,8:8:21.07:335,21,0	1/1:0,9:9:27.09:431,27,0	1/1:1,26:27:78.18:1173,78,0	1/1:1,18:19:45.15:719,45,0	0/0:21,0:21:63.16:0,63,845	0/0:22,0:22:66.22:0,66,922	0/0:18,0:18:42.09:0,42,549	1/1:0,18:18:51.10:773,51,0	1/1:0,18:19:54.13:799,54,0	1/1:1,32:33:90.24:1407,90,0	1/1:0,5:5:15.05:239,15,0
chr10	27274772	.	T	TTA	10229.22	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-14.811;DP=550;FS=1.925;HRun=0;HaplotypeScore=111.4541;InbreedingCoeff=0.9641;MQ=85.04;MQ0=0;MQRankSum=-2.091;QD=48.94;ReadPosRankSum=1.346;VQSLOD=5.4740;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:68.84:0,69,552	1/1:14,0:14:12.80:44,13,0	0/0:17,0:17:39.13:0,39,618	0/0:18,0:18:46.97:0,47,719	0/0:26,0:26:77.81:0,78,625	1/1:0,13:13:39.13:792,39,0	1/1:0,11:11:27.09:549,27,0	0/0:33,0:33:85.58:0,86,616	0/0:22,0:22:57.01:0,57,524	0/0:30,0:30:82.93:0,83,571	0/0:16,0:16:44.92:0,45,369	1/1:1,21:23:66.23:1318,66,0	1/1:0,29:30:81.28:1646,81,0	1/1:0,22:24:66.23:1341,66,0	1/1:6,24:30:90.29:1720,90,0	0/0:21,0:21:28.91:0,29,406	1/1:8,0:8:3.65:16,4,0	0/0:4,0:4:9:0,9,81	0/0:12,0:12:35.79:0,36,275	0/0:22,0:22:65.81:0,66,519	0/0:21,0:21:59.83:0,60,479	1/1:0,23:23:54.19:1097,54,0	1/1:0,16:17:48.16:975,48,0	1/1:0,16:16:36.12:731,36,0	0/0:27,0:27:77.76:0,78,611	0/0:22,0:22:59.07:0,59,456	0/0:19,0:19:47.94:0,48,413	0/0:7,0:7:17.92:0,18,139
chr10	27274940	.	AAAGCACTGTC	A	22156.31	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=15.340;DP=548;FS=13.880;HRun=0;HaplotypeScore=196.7721;InbreedingCoeff=0.9514;MQ=77.68;MQ0=0;MQRankSum=-16.240;QD=73.37;ReadPosRankSum=0.472;VQSLOD=3.8349;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,4:7:12.04:385,12,0	1/1:0,8:8:21.07:675,21,0	0/0:23,0:22:22.71:0,23,2205	0/0:15,0:15:24.11:0,24,1228	1/1:3,26:29:66.18:2012,66,0	0/0:29,0:29:87.30:0,87,4398	0/0:14,0:14:42.14:0,42,2069	1/1:9,21:30:63.18:1785,63,0	1/1:3,14:17:36.12:1156,36,0	1/1:2,24:26:72.25:2243,72,0	1/1:0,20:20:54.19:1734,54,0	0/0:21,0:21:60.21:0,60,2984	0/0:24,0:24:69.24:0,69,3282	0/0:29,0:29:72.23:0,72,3371	0/0:32,0:32:90.30:0,90,3703	1/1:1,18:19:51.18:1638,51,0	1/1:1,3:4:6.02:193,6,0	1/1:0,1:1:3.01:96,3,0	1/1:3,11:14:33.11:912,33,0	1/1:2,32:34:81.28:2602,81,0	1/1:2,10:12:15.05:435,15,0	0/0:23,0:23:69.24:0,69,3556	0/0:24,0:24:69.24:0,69,3297	0/0:12,0:12:36.12:0,36,1862	1/1:0,25:25:75.26:2409,75,0	1/1:2,18:20:54.17:1663,54,0	1/1:7,23:30:51.18:1638,51,0	1/1:0,6:6:18.06:578,18,0
chr10	27275291	.	T	TTAGA	3230.05	PASS	AB=1.000;AC=19;AF=0.396;AN=48;BaseQRankSum=-3.974;DP=683;FS=1.288;HRun=0;HaplotypeScore=154.0745;InbreedingCoeff=0.7739;MQ=69.20;MQ0=3;MQRankSum=-0.308;QD=13.35;ReadPosRankSum=-3.396;VQSLOD=3.0598;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:24:99:106,0,202	1/1:12,0:12:3.01:49,3,0	./.	./.	1/1:19,7:27:27.07:538,27,0	0/0:18,0:28:21.02:0,21,195	0/0:14,0:17:0.94:0,1,1	./.	1/1:23,0:28:18.06:312,18,0	0/0:38,0:38:42.14:0,42,615	1/1:16,9:23:15.05:346,15,0	0/0:23,0:30:21.02:0,21,195	0/0:22,0:28:15.01:0,15,140	0/0:15,0:22:15.02:0,15,140	1/1:14,0:20:15.05:264,15,0	0/0:34,0:34:51.15:0,51,726	./.	1/1:8,0:8:5.68:37,6,0	0/0:16,0:16:21.07:0,21,316	0/0:34,0:34:30.10:0,30,451	0/0:11,0:11:18.06:0,18,268	0/0:14,0:21:12:0,12,107	0/0:15,0:20:7.25:0,7,59	0/0:14,0:18:3:0,3,28	0/0:32,0:32:45.15:0,45,672	1/1:24,14:38:43.39:933,43,0	1/1:25,14:44:21.07:485,21,0	1/1:4,8:14:15.05:346,15,0
chr10	27276090	.	T	TA	11335.20	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-12.719;DP=615;FS=4.494;HRun=8;HaplotypeScore=57.1794;InbreedingCoeff=0.9904;MQ=85.64;MQ0=0;MQRankSum=-1.897;QD=28.55;ReadPosRankSum=-0.378;VQSLOD=5.0470;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,12:15:33.10:381,33,0	1/1:0,4:4:12.04:138,12,0	0/0:19,0:19:41.99:0,42,379	0/0:20,0:20:30.01:0,30,272	1/1:5,30:36:96.07:1065,96,0	0/0:28,0:28:78.02:0,78,708	0/0:18,0:18:45.02:0,45,412	1/1:5,26:31:47.70:778,48,0	1/1:3,15:18:42.12:485,42,0	1/1:3,16:19:48.14:554,48,0	1/1:1,28:29:79.44:889,79,0	0/0:23,0:23:57.02:0,57,520	0/0:26,1:27:40.42:0,40,624	0/0:22,0:22:57.02:0,57,517	1/1:6,34:40:99:1143,99,0	1/1:1,18:19:48.14:554,48,0	1/1:3,13:16:33.10:381,33,0	1/1:1,6:7:15.04:173,15,0	1/1:5,21:26:66.17:747,66,0	1/1:0,28:28:84.25:969,84,0	1/1:0,14:14:39.12:450,39,0	0/0:25,0:25:66.03:0,66,604	0/0:19,0:19:39:0,39,356	0/0:17,0:17:48.02:0,48,439	1/1:4,23:27:54.12:608,54,0	1/1:4,20:24:60.18:691,60,0	1/1:3,36:39:99:1177,102,0	1/1:0,4:5:14.88:153,15,0
chr10	27276986	.	T	TGAGAGAGA	9328.81	PASS	AB=1.000;AC=49;AF=0.907;AN=54;BaseQRankSum=-1.634;DP=542;FS=3.358;HRun=0;HaplotypeScore=167.2667;InbreedingCoeff=0.3472;MQ=53.29;MQ0=15;MQRankSum=-1.732;QD=20.50;ReadPosRankSum=0.425;VQSLOD=4.4217;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:18,1:25:8.71:269,9,0	0/1:8,0:8:0:0,0,0	1/1:43,0:13:0.47:1,0,0	0/0:47,0:11:2.95:0,3,21	1/1:23,5:28:14.28:610,14,0	1/1:23,0:21:5.66:62,6,0	1/1:12,0:10:6.02:104,6,0	1/1:23,0:23:18.06:451,18,0	1/1:4,7:13:27.08:992,27,0	1/1:31,1:32:36.11:1109,36,0	1/1:18,3:21:9.03:363,9,0	1/1:13,0:13:18.05:399,18,0	1/1:15,0:14:6.02:219,6,0	1/1:15,0:14:2.91:104,3,0	1/1:12,0:11:6.01:129,6,0	1/1:17,0:21:24.08:842,24,0	1/1:12,0:13:11.78:324,12,0	1/1:5,0:5:6.02:117,6,0	1/1:19,0:18:14.26:311,14,0	1/1:18,3:23:14.50:528,15,0	1/1:4,3:9:6.02:236,6,0	0/0:17,0:17:0.47:0,0,1	./.	1/1:6,0:6:2.67:65,3,0	1/1:15,0:15:6.02:117,6,0	1/1:18,2:23:30.96:818,31,0	1/1:17,6:25:30.99:1036,31,0	1/1:8,1:10:3.01:123,3,0
chr10	27277640	.	T	TGG	567.51	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=3.302;DP=509;FS=11.051;HRun=9;HaplotypeScore=75.6281;InbreedingCoeff=0.9518;MQ=82.86;MQ0=0;MQRankSum=-1.288;QD=18.31;ReadPosRankSum=-1.341;VQSLOD=0.9535;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:9.47:0,9,97	1/1:0,9:9:15.05:231,15,0	0/0:26,0:26:32.39:0,32,495	0/0:19,0:19:33.03:0,33,335	0/0:22,0:23:38.22:0,38,469	0/0:29,0:29:66.14:0,66,702	0/0:14,0:14:39.05:0,39,396	0/0:34,0:35:55.78:0,56,574	0/0:15,0:15:45.11:0,45,479	0/0:23,0:23:57.11:0,57,599	0/0:13,0:13:24.03:0,24,255	0/0:24,0:24:60.11:0,60,630	0/0:20,0:20:51.11:0,51,535	0/0:16,0:16:39.08:0,39,413	1/1:14,0:17:30.01:288,30,0	0/0:24,0:24:60.14:0,60,638	1/1:0,5:4:12.04:185,12,0	0/0:6,0:6:15.03:0,15,160	0/0:14,0:14:33.07:0,33,351	0/0:21,0:21:60.13:0,60,630	0/0:24,0:24:60.12:0,60,629	0/0:19,0:19:32.98:0,33,333	0/0:18,0:18:39.05:0,39,415	0/0:8,0:8:18.01:0,18,191	0/0:17,0:18:45.72:0,46,460	0/0:20,0:20:36.06:0,36,382	0/0:26,0:27:46.65:0,47,672	0/0:8,0:9:17.77:0,18,171
chr10	27277736	.	G	GTTTTGA	44555.12	PASS	AB=1.000;AC=51;AF=0.911;AN=56;BaseQRankSum=-2.814;DP=600;FS=7.480;HRun=0;HaplotypeScore=119.1561;InbreedingCoeff=0.7941;MQ=75.60;MQ0=0;MQRankSum=-9.736;QD=79.99;ReadPosRankSum=7.024;VQSLOD=5.7863;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,13:15:27.09:800,27,0	1/1:0,11:14:30.10:1027,30,0	0/0:22,0:22:55.80:0,56,1175	0/0:21,0:21:50.73:0,51,978	1/1:0,22:29:57.02:1560,57,0	1/1:0,20:24:51.18:1831,51,0	1/1:0,13:15:27.09:921,27,0	1/1:2,28:38:99:3567,111,0	1/1:1,15:18:45.15:1616,45,0	1/1:0,21:24:72.25:2411,72,0	1/1:2,17:26:54.19:1934,54,0	1/1:2,19:27:60.16:2065,60,0	1/1:1,30:40:87.30:3123,87,0	1/1:1,19:22:54.19:1922,54,0	1/1:1,20:23:57.20:2040,57,0	1/1:0,23:27:60.21:2146,60,0	1/1:0,2:4:6.02:215,6,0	0/1:4,0:4:2.96:181,0,3	1/1:3,14:20:57.17:1849,57,0	1/1:0,21:23:63.22:2262,63,0	1/1:2,7:9:18.06:497,18,0	1/1:0,16:18:42.14:1507,42,0	1/1:2,16:23:48.64:1693,49,0	1/1:0,9:9:14.69:505,15,0	1/1:0,26:30:69.24:2367,69,0	1/1:2,25:29:87.26:2887,87,0	1/1:1,27:35:81.28:2873,81,0	1/1:0,9:11:21.07:755,21,0
chr10	27281677	.	TA	T	1005.71	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=6.733;DP=615;FS=1.181;HRun=10;HaplotypeScore=64.7517;InbreedingCoeff=0.9326;MQ=76.80;MQ0=0;MQRankSum=-2.387;QD=18.98;ReadPosRankSum=3.104;VQSLOD=4.6233;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:72.15:0,72,777	1/1:2,5:7:14.99:130,15,0	0/0:16,1:17:31.73:0,32,299	0/0:13,0:13:13.20:0,13,191	0/0:39,1:40:76.20:0,76,1054	0/0:21,0:21:51.14:0,51,564	0/0:15,0:15:42.11:0,42,465	0/0:39,1:39:79.19:0,79,1076	0/0:25,0:25:63.17:0,63,693	0/0:27,0:27:66.17:0,66,723	0/0:34,0:35:78.04:0,78,844	0/0:22,0:22:45.12:0,45,497	0/0:12,0:12:36.10:0,36,398	0/0:15,0:17:38.94:0,39,412	1/1:3,20:23:56.98:495,57,0	0/0:14,0:14:39.11:0,39,431	1/1:3,20:23:59.98:521,60,0	0/0:3,0:3:9.02:0,9,100	0/0:14,0:14:21.05:0,21,226	0/0:34,0:34:75.18:0,75,814	0/0:8,0:8:18.05:0,18,199	0/0:19,0:19:54.05:0,54,557	0/0:28,1:29:58.35:0,58,606	0/0:13,1:14:7.03:0,7,306	0/0:25,0:25:63.14:0,63,679	0/0:30,0:30:69.16:0,69,747	0/0:45,0:45:99:0,114,1233	0/0:15,0:15:39.10:0,39,431
chr10	27284244	.	T	TA	1055.28	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-5.671;DP=582;FS=9.179;HRun=8;HaplotypeScore=55.3514;InbreedingCoeff=0.9967;MQ=71.68;MQ0=0;MQRankSum=-3.824;QD=24.54;ReadPosRankSum=0.942;VQSLOD=4.1363;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,108,983	1/1:1,11:12:33.07:367,33,0	0/0:12,0:12:29.37:0,29,253	0/0:13,1:14:23.99:0,24,209	0/0:34,0:34:96.04:0,96,879	0/0:21,0:21:60:0,60,539	0/0:20,0:20:57.03:0,57,522	0/0:35,0:35:84:0,84,761	0/0:16,0:16:39.01:0,39,356	0/0:23,0:24:67.85:0,68,607	0/0:19,0:20:53.04:0,53,464	0/0:20,0:20:60:0,60,539	0/0:19,0:19:51.02:0,51,467	0/0:25,0:25:66.03:0,66,603	1/1:2,14:16:39.12:450,39,0	0/0:23,0:23:60:0,60,540	1/1:3,12:15:33.10:381,33,0	0/0:22,0:22:54.02:0,54,494	0/0:16,0:16:39.02:0,39,356	0/0:30,0:30:81.04:0,81,741	0/0:10,0:10:30:0,30,270	0/0:14,0:14:33.02:0,33,302	0/0:21,0:21:60.03:0,60,549	0/0:10,0:10:27.01:0,27,247	0/0:30,0:31:77.07:0,77,692	0/0:26,0:26:66.03:0,66,604	0/0:30,0:30:78.03:0,78,713	0/0:7,0:7:21.01:0,21,192
chr10	27286327	.	T	TCATA	10397.01	PASS	AB=0.663;AC=28;AF=0.538;AN=52;BaseQRankSum=-12.082;DP=547;FS=6.752;HRun=0;HaplotypeScore=111.7727;InbreedingCoeff=0.8083;MQ=64.64;MQ0=7;MQRankSum=2.437;QD=28.41;ReadPosRankSum=-2.778;VQSLOD=3.7476;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,5:20:27.09:597,27,0	0/0:3,0:8:8.69:0,9,67	0/0:16,0:12:3.01:0,3,40	./.	1/1:11,14:25:36.12:835,36,0	0/0:10,0:22:30.03:0,30,279	0/0:5,0:11:20.95:0,21,184	1/1:48,0:46:23.97:309,24,0	1/1:18,9:27:39.13:909,39,0	1/1:12,12:24:51.16:1112,51,0	1/1:7,17:23:18.06:425,18,0	0/0:4,0:14:24.03:0,24,224	0/0:5,0:17:31.28:0,31,283	0/0:10,0:16:24.03:0,24,228	0/0:10,0:24:24.03:0,24,224	1/1:7,9:16:21.07:496,21,0	./.	1/1:8,9:17:24.08:567,24,0	1/1:5,3:9:12.02:236,12,0	1/1:15,23:41:57.20:1346,57,0	1/1:16,9:25:33.11:749,33,0	0/0:3,0:10:21.02:0,21,196	0/0:9,0:21:30.03:0,30,280	0/0:2,0:5:6.01:0,6,56	0/1:11,10:21:16.72:608,0,17	0/1:14,14:28:1.67:912,0,2	1/1:20,10:30:48.15:1085,48,0	1/1:5,3:8:9.03:212,9,0
chr10	27286457	.	TA	T	10586.32	PASS	AC=46;AF=0.852;AN=54;BaseQRankSum=-11.817;DP=527;FS=0.000;HRun=8;HaplotypeScore=56.4665;InbreedingCoeff=0.9870;MQ=67.65;MQ0=0;MQRankSum=1.023;QD=23.01;ReadPosRankSum=0.183;VQSLOD=5.1741;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,24:26:60.09:579,60,0	0/0:1,0:6:14.20:0,14,72	0/0:7,0:7:14.72:0,15,129	./.	1/1:4,22:26:53.88:489,54,0	1/1:3,18:21:51.08:492,51,0	1/1:2,9:11:21.03:203,21,0	1/1:2,21:22:60:549,60,0	1/1:2,19:21:54.08:521,54,0	1/1:4,28:32:81.07:764,81,0	1/1:6,14:20:45.07:434,45,0	1/1:1,24:25:60.10:579,60,0	1/1:1,23:24:51.08:492,51,0	1/1:2,21:23:54.09:521,54,0	0/0:2,0:25:62.66:0,63,321	1/1:0,20:20:48.07:463,48,0	0/0:0,0:26:71.02:0,71,359	1/1:1,18:19:48.08:463,48,0	1/1:5,16:22:50.08:457,50,0	1/1:0,15:15:45.07:434,45,0	1/1:0,9:9:24.04:232,24,0	1/1:2,10:12:30.05:290,30,0	1/1:4,15:19:45.06:430,45,0	1/1:1,11:12:27.04:261,27,0	1/1:0,17:17:39.06:376,39,0	1/1:2,22:24:66.10:633,66,0	1/1:2,29:31:72.11:695,72,0	1/1:0,8:8:24.04:232,24,0
chr10	27286646	.	TC	T	966.41	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.642;DP=579;FS=0.664;HRun=3;HaplotypeScore=67.7885;InbreedingCoeff=0.9656;MQ=73.07;MQ0=0;MQRankSum=-8.953;QD=30.20;ReadPosRankSum=1.475;VQSLOD=3.3474;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:60.20:0,60,864	1/1:0,6:6:18.05:213,18,0	0/0:10,0:10:30.10:0,30,419	0/0:13,0:13:13.06:0,13,265	0/0:34,0:34:99:0,102,1466	0/0:21,0:21:63.21:0,63,907	0/0:14,0:14:42.14:0,42,604	0/0:35,0:35:99:0,102,1469	0/0:16,1:17:11.78:0,12,591	0/0:35,0:35:99:0,99,1412	0/0:25,0:25:75.25:0,75,1078	0/0:25,0:25:75.25:0,75,1080	0/0:25,0:25:75.25:0,75,1069	0/0:23,0:23:66.22:0,66,945	1/1:0,21:21:60.18:715,60,0	0/0:27,0:27:81.27:0,81,1166	1/1:0,5:5:15.05:178,15,0	0/0:18,0:18:51.17:0,51,734	0/0:27,0:27:75.24:0,75,1062	0/0:29,0:29:87.29:0,87,1251	0/0:15,0:15:45.15:0,45,648	0/0:20,0:20:57.19:0,57,818	0/0:23,0:23:63.21:0,63,906	0/0:12,0:12:33.11:0,33,475	0/0:27,0:27:78.26:0,78,1123	0/0:17,0:17:51.17:0,51,735	0/0:29,0:29:84.28:0,84,1206	0/0:5,0:5:15.05:0,15,216
chr10	27287337	.	G	GGATAGATA	6088.44	PASS	AB=0.892;AC=45;AF=0.865;AN=52;BaseQRankSum=-4.645;DP=661;FS=1.452;HRun=0;HaplotypeScore=169.5563;InbreedingCoeff=0.1299;MQ=55.96;MQ0=19;MQRankSum=1.711;QD=10.64;ReadPosRankSum=-2.296;VQSLOD=3.8213;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:22:0.47:117,0,0	0/0:5,0:10:3:0,3,56	./.	./.	1/1:17,15:34:6.02:122,6,0	1/1:10,0:20:5.99:49,6,0	0/0:19,0:19:0.29:0,0,1	1/1:44,0:43:9.61:54,10,0	1/1:18,8:30:18.03:411,18,0	1/1:13,8:26:30.06:560,30,0	1/1:17,7:28:2.04:72,2,0	1/1:10,0:20:17.87:138,18,0	1/1:7,0:13:17.98:166,18,0	1/1:14,0:24:11.66:84,12,0	0/1:11,0:28:31.90:32,0,234	1/1:7,11:22:9.03:364,9,0	0/1:10,0:19:11.68:12,0,50	1/1:13,0:14:20.97:316,21,0	1/1:11,0:11:3.01:51,3,0	1/1:13,18:33:29.57:858,30,0	1/1:15,0:15:5.61:101,6,0	0/1:11,0:21:18.38:18,0,56	1/1:20,0:28:14.97:122,15,0	1/1:10,0:14:5.99:49,6,0	1/1:14,13:32:27.06:839,27,0	1/1:16,9:26:30.09:823,30,0	1/1:22,15:40:18.03:531,18,0	1/1:7,0:7:10.85:198,11,0
chr10	27289237	.	A	AACACACACACACACAC	17744.97	PASS	AB=1.000;AC=53;AF=0.946;AN=56;BaseQRankSum=-1.639;DP=625;FS=0.000;HRun=0;HaplotypeScore=282.4359;InbreedingCoeff=0.3583;MQ=56.74;MQ0=8;MQRankSum=-0.310;QD=29.48;ReadPosRankSum=2.750;VQSLOD=2.9242;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:35,0:35:28.91:503,29,0	1/1:9,0:9:11.96:304,12,0	0/0:23,0:13:8.78:0,9,56	0/1:40,0:19:13.72:14,0,55	1/1:27,0:27:39:1086,39,0	1/1:30,0:29:18.40:318,18,0	1/1:23,0:24:20.97:448,21,0	1/1:35,0:34:48.06:1162,48,0	1/1:16,0:16:24.03:648,24,0	1/1:22,0:22:47.97:1132,48,0	1/1:29,0:29:36.11:795,36,0	1/1:24,0:24:18.03:565,18,0	1/1:33,0:31:35.48:1203,35,0	1/1:9,10:19:15.05:916,15,0	1/1:18,0:18:3.01:198,3,0	1/1:31,0:30:30.09:1133,30,0	1/1:17,0:17:13.51:490,14,0	1/1:9,0:9:15.05:432,15,0	1/1:14,0:13:17.90:407,18,0	1/1:22,0:22:27.18:517,27,0	1/1:13,0:12:2.38:62,2,0	1/1:12,0:13:6:221,6,0	1/1:18,0:17:12.04:541,12,0	1/1:14,3:19:3.01:137,3,0	1/1:29,0:29:23.11:737,23,0	1/1:23,0:20:41.91:1313,42,0	1/1:23,0:23:53.97:2038,54,0	1/1:6,0:6:11.96:428,12,0
chr10	27289255	.	C	CACACACACACACACACAA	20471.28	PASS	AB=1.000;AC=45;AF=0.804;AN=56;BaseQRankSum=3.614;DP=730;FS=16.842;HRun=0;HaplotypeScore=315.9712;InbreedingCoeff=0.1528;MQ=48.51;MQ0=21;MQRankSum=-4.220;QD=32.19;ReadPosRankSum=5.238;VQSLOD=2.0073;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:31,0:31:57.49:1131,57,0	1/1:9,0:9:18.04:414,18,0	0/0:42,0:14:23.48:0,23,242	0/0:51,0:22:8.77:0,9,313	1/1:30,0:30:71.90:1253,72,0	0/1:31,0:30:99:193,0,136	0/1:28,0:27:81.86:238,0,82	1/1:27,0:40:92.92:1995,93,0	1/1:20,0:20:53.92:904,54,0	1/1:24,0:23:57.71:1441,58,0	1/1:28,0:27:59.91:651,60,0	0/1:30,0:30:91.71:443,0,92	1/1:30,0:27:15.62:1007,16,0	0/1:23,0:22:68.77:715,0,69	1/1:5,16:31:3.48:256,3,0	1/1:31,0:30:59.87:1389,60,0	1/1:5,8:20:11.72:602,12,0	1/1:12,0:12:26.98:720,27,0	1/1:25,0:20:44.92:506,45,0	1/1:19,0:32:36.90:532,37,0	1/1:8,0:14:5.29:69,5,0	0/1:14,0:14:12.95:238,0,13	0/1:16,0:15:54.84:242,0,55	0/1:19,0:19:38.91:111,0,39	1/1:31,0:31:68.35:1180,68,0	1/1:22,0:19:17.22:1183,17,0	1/1:29,0:29:78.13:2465,78,0	1/1:10,0:10:24.43:593,24,0
chr10	27290184	.	GA	G	5646.41	PASS	AB=1.000;AC=37;AF=0.661;AN=56;BaseQRankSum=7.044;DP=410;FS=11.939;HRun=10;HaplotypeScore=47.2908;InbreedingCoeff=0.8949;MQ=63.59;MQ0=6;MQRankSum=-0.202;QD=18.70;ReadPosRankSum=2.629;VQSLOD=4.8320;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,19:24:53.97:469,54,0	1/1:2,5:7:14.99:130,15,0	0/0:11,0:8:17.29:0,17,145	0/1:13,0:10:1.78:2,0,87	1/1:3,10:13:26.99:234,27,0	0/0:12,0:12:30.08:0,30,332	0/0:12,1:13:4.02:0,4,272	1/1:8,16:21:41.66:361,42,0	1/1:4,11:15:32.99:286,33,0	1/1:4,11:14:32.97:283,33,0	1/1:1,13:14:35.78:296,36,0	0/0:8,0:8:21.05:0,21,225	0/0:13,0:13:36.10:0,36,398	0/0:11,0:11:30.07:0,30,325	1/1:0,6:6:15:130,15,0	1/1:6,9:15:23.97:208,24,0	1/1:1,24:25:56.99:495,57,0	1/1:3,16:19:44.99:391,45,0	1/1:2,8:9:23.99:207,24,0	1/1:4,19:22:59.95:516,60,0	1/1:1,1:2:3:26,3,0	0/0:9,0:9:18.05:0,18,199	0/0:11,0:12:32.91:0,33,337	0/0:18,0:17:39.06:0,39,418	1/1:2,15:17:47.99:417,48,0	1/1:4,17:21:50.97:440,51,0	1/1:2,15:17:41.99:365,42,0	1/1:6,16:22:44.94:391,45,0
chr10	27290379	.	G	GT	10936.82	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-15.491;DP=487;FS=1.105;HRun=2;HaplotypeScore=41.4441;InbreedingCoeff=0.9973;MQ=90.64;MQ0=0;MQRankSum=-3.183;QD=38.37;ReadPosRankSum=1.136;VQSLOD=5.0187;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,30:32:75.25:1080,75,0	0/0:5,0:5:15.05:0,15,186	0/0:15,0:15:42.10:0,42,485	0/0:22,0:22:56.22:0,56,688	1/1:0,16:16:45.11:613,45,0	0/0:26,0:26:75.19:0,75,890	0/0:22,0:22:66.17:0,66,801	1/1:1,28:29:84.24:1140,84,0	1/1:0,22:22:63.21:907,63,0	1/1:2,21:22:63.20:887,63,0	1/1:0,11:11:30.10:432,30,0	0/0:17,0:17:48.15:0,48,591	0/0:12,0:12:33.10:0,33,398	0/0:14,0:14:42.13:0,42,521	0/0:15,0:15:42.13:0,42,521	1/1:0,15:15:36.12:518,36,0	0/0:21,0:21:60.16:0,60,727	1/1:1,12:13:33.11:465,33,0	1/1:0,18:18:54.18:776,54,0	1/1:0,17:17:51.17:734,51,0	1/1:2,10:12:33.09:456,33,0	0/0:11,0:11:30.09:0,30,372	0/0:10,0:10:30.09:0,30,372	0/0:12,0:12:36.10:0,36,433	1/1:0,14:14:39.13:562,39,0	1/1:1,23:24:69.23:990,69,0	1/1:4,22:26:69.23:988,69,0	1/1:0,13:13:27.09:389,27,0
chr10	27290476	.	A	AT	17020.15	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-8.012;DP=596;FS=8.987;HRun=7;HaplotypeScore=51.1081;InbreedingCoeff=0.9901;MQ=82.73;MQ0=0;MQRankSum=-8.677;QD=30.18;ReadPosRankSum=6.166;VQSLOD=4.3268;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,12:18:42.09:490,42,0	1/1:2,10:12:27.08:326,27,0	0/0:25,0:25:72.10:0,72,689	0/0:7,0:7:14.90:0,15,127	1/1:7,22:29:72.22:863,72,0	1/1:2,17:18:43.95:512,44,0	1/1:0,14:14:33.10:399,33,0	1/1:5,28:34:87.16:995,87,0	1/1:0,21:21:63.19:761,63,0	1/1:3,25:28:72.20:857,72,0	1/1:0,19:19:57.17:689,57,0	1/1:3,18:21:52.04:618,52,0	1/1:1,11:12:30.09:362,30,0	1/1:3,22:25:60.18:725,60,0	1/1:1,19:20:51.16:616,51,0	1/1:3,25:28:40.24:769,40,0	1/1:4,20:24:45.14:540,45,0	1/1:0,19:19:51.16:616,51,0	1/1:4,15:19:45.14:543,45,0	1/1:2,31:33:81.25:979,81,0	1/1:1,20:21:60.05:704,60,0	1/1:2,12:14:30.05:346,30,0	1/1:1,22:23:57.17:689,57,0	1/1:0,11:11:33.10:399,33,0	1/1:1,31:32:84.26:1015,84,0	1/1:2,17:19:51.16:616,51,0	1/1:2,29:31:81.25:977,81,0	1/1:0,17:17:51.16:616,51,0
chr10	27290961	.	AAAAG	A	16498.67	PASS	AB=1.000;AC=37;AF=0.661;AN=56;BaseQRankSum=13.412;DP=529;FS=1.662;HRun=0;HaplotypeScore=94.2717;InbreedingCoeff=0.9092;MQ=65.34;MQ0=1;MQRankSum=-1.257;QD=42.74;ReadPosRankSum=2.669;VQSLOD=5.3900;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,15:17:33.11:583,33,0	1/1:1,9:10:21.07:371,21,0	0/0:6,0:6:17.88:0,18,331	0/1:6,0:6:14.50:14,0,106	1/1:3,25:28:72.10:1167,72,0	0/0:18,0:18:54.19:0,54,1384	0/0:15,0:15:42.14:0,42,1024	1/1:6,29:35:87.26:1438,87,0	1/1:0,20:19:54.19:955,54,0	1/1:4,17:21:51.17:901,51,0	1/1:1,26:27:75.08:1171,75,0	0/0:23,0:23:69.24:0,69,1735	0/0:25,0:25:69.24:0,69,1768	0/0:15,0:15:39.13:0,39,988	1/1:0,31:31:72.25:1247,72,0	1/1:2,16:18:42.14:743,42,0	1/1:0,21:21:54.19:955,54,0	1/1:3,6:9:15.05:265,15,0	1/1:1,16:17:45.14:766,45,0	1/1:1,30:31:90.27:1555,90,0	1/1:0,7:7:12.04:212,12,0	0/0:10,0:10:27.09:0,27,661	0/0:27,0:27:72.25:0,72,1748	0/0:4,0:4:12.04:0,12,286	1/1:1,23:24:63.22:1114,63,0	1/1:0,24:24:72.20:1239,72,0	1/1:1,26:27:75.26:1325,75,0	1/1:3,10:13:27.09:477,27,0
chr10	27291885	.	A	AG	13975.23	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-1.182;DP=550;FS=29.432;HRun=2;HaplotypeScore=85.5914;InbreedingCoeff=0.9784;MQ=81.48;MQ0=0;MQRankSum=-8.385;QD=27.08;ReadPosRankSum=3.798;VQSLOD=3.1340;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:19:53.95:460,54,0	1/1:0,6:6:12.04:173,12,0	0/0:18,0:17:35.20:0,35,409	0/0:16,0:16:34.30:0,34,376	1/1:19,1:20:56.96:490,57,0	1/1:0,15:15:36.12:517,36,0	1/1:1,17:18:36.12:518,36,0	1/1:44,0:44:99:1040,125,0	1/1:15,0:15:32.99:285,33,0	1/1:26,0:26:74.35:633,74,0	1/1:15,0:15:35.84:302,36,0	1/1:0,23:23:57.19:819,57,0	1/1:1,24:25:63.10:878,63,0	1/1:0,26:26:60.20:861,60,0	1/1:1,23:24:60.19:845,60,0	1/1:19,0:19:41.99:364,42,0	1/1:3,8:11:21.07:301,21,0	1/1:14,0:14:38.96:332,39,0	1/1:16,1:17:47.58:415,48,0	1/1:21,0:21:62.94:539,63,0	1/1:12,0:12:29.99:258,30,0	1/1:1,10:11:30.10:431,30,0	1/1:1,11:12:30.10:431,30,0	1/1:1,23:24:60.20:863,60,0	1/1:10,0:10:21:182,21,0	1/1:32,0:32:92.71:773,93,0	1/1:43,1:44:99:1031,119,0	1/1:13,0:13:26.99:233,27,0
chr10	27291887	.	G	GGA	18861.97	PASS	AB=1.000;AC=50;AF=0.893;AN=56;BaseQRankSum=-3.706;DP=549;FS=25.007;HRun=0;HaplotypeScore=77.2713;InbreedingCoeff=0.6480;MQ=79.41;MQ0=0;MQRankSum=-6.955;QD=36.41;ReadPosRankSum=5.460;VQSLOD=4.0474;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,18:18:54.19:1081,54,0	1/1:5,0:5:11.61:63,12,0	0/0:16,0:15:38.26:0,38,551	0/0:15,0:15:35.82:0,36,518	1/1:1,19:20:57.20:1131,57,0	1/1:15,0:15:14.77:165,15,0	0/1:18,0:18:4.58:147,0,5	1/1:0,42:44:99:2207,132,0	1/1:0,14:16:33.11:666,33,0	1/1:3,24:28:78.22:1431,78,0	1/1:0,12:14:36.07:618,36,0	1/1:24,0:24:55.15:298,55,0	1/1:24,0:25:57:311,57,0	1/1:26,0:26:57.99:312,58,0	1/1:23,1:24:58.16:359,58,0	1/1:1,18:20:42.14:849,42,0	0/1:8,0:8:0.34:86,0,0	1/1:1,13:14:39.13:782,39,0	1/1:2,15:17:48.06:906,48,0	1/1:0,21:21:63.16:1231,63,0	1/1:1,12:14:30.10:604,30,0	1/1:10,0:10:29.03:157,29,0	1/1:12,0:12:8.96:134,9,0	1/1:23,0:23:58.05:313,58,0	1/1:1,10:11:2.40:403,2,0	1/1:0,33:34:99:1786,102,0	1/1:2,38:44:99:2276,116,0	1/1:0,13:13:27.09:545,27,0
chr10	27292277	.	G	GTT	13676.45	PASS	AB=0.568;AC=50;AF=0.893;AN=56;BaseQRankSum=-6.054;DP=664;FS=8.042;HRun=9;HaplotypeScore=93.2900;InbreedingCoeff=0.7363;MQ=80.76;MQ0=2;MQRankSum=-7.130;QD=22.68;ReadPosRankSum=4.795;VQSLOD=3.6399;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,19:25:59.56:843,60,0	1/1:1,0:8:17.47:60,17,0	0/0:35,0:26:20.15:0,20,382	0/0:24,0:20:22.69:0,23,239	1/1:5,22:28:66.22:981,66,0	1/1:5,0:31:15.41:121,15,0	1/1:5,0:21:22.46:77,22,0	1/1:10,22:32:63.21:967,63,0	1/1:0,12:12:30.10:462,30,0	1/1:6,24:31:77.84:1126,78,0	1/1:3,24:27:72.20:1080,72,0	1/1:7,1:27:45.31:191,45,0	1/1:10,0:38:60.76:206,61,0	1/1:6,0:27:23.48:148,23,0	1/1:3,0:30:47.41:163,47,0	1/1:3,18:21:48.16:739,48,0	0/1:6,0:19:1.45:64,0,1	1/1:2,15:19:41.10:539,41,0	1/1:2,16:20:54.16:784,54,0	1/1:4,23:27:66.07:910,66,0	1/1:1,7:8:21.07:323,21,0	1/1:0,0:14:28.90:101,29,0	1/1:2,0:22:41.33:144,41,0	0/1:2,0:13:1.47:64,0,1	1/1:3,25:30:71.72:1042,72,0	1/1:4,22:26:66.20:991,66,0	1/1:3,25:30:60.03:906,60,0	1/1:1,15:16:42.14:646,42,0
chr10	27292556	.	GA	G	5492.60	PASS	AB=0.909;AC=29;AF=0.537;AN=54;BaseQRankSum=3.189;DP=438;FS=7.482;HRun=9;HaplotypeScore=65.5973;InbreedingCoeff=0.9076;MQ=80.00;MQ0=0;MQRankSum=-1.447;QD=20.65;ReadPosRankSum=0.615;VQSLOD=5.4793;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,26:27:72.02:659,72,0	0/0:2,0:2:6.02:0,6,69	0/0:14,0:13:21.80:0,22,225	0/0:14,1:13:21.26:0,21,193	1/1:5,16:21:45.01:412,45,0	0/0:17,0:17:45.12:0,45,510	0/0:11,0:11:27.06:0,27,301	1/1:3,21:24:62.95:558,63,0	1/1:3,14:17:4.40:295,4,0	1/1:2,8:10:24.01:220,24,0	1/1:1,17:18:45.01:412,45,0	0/0:16,0:16:39.12:0,39,450	0/0:19,0:19:57.14:0,57,639	0/0:23,0:23:47.81:0,48,700	0/0:18,0:18:51.15:0,51,589	1/1:2,16:18:42.02:384,42,0	0/0:13,0:13:33.06:0,33,365	1/1:4,6:10:18.01:165,18,0	1/1:4,23:27:69.03:628,69,0	1/1:2,7:9:18.01:165,18,0	1/1:3,7:10:15:137,15,0	0/0:14,0:14:36.09:0,36,405	0/1:9,1:10:3.41:3,0,208	0/0:9,0:9:21.06:0,21,242	1/1:3,18:21:54.03:493,54,0	1/1:1,15:16:42.01:384,42,0	1/1:3,25:28:63.03:577,63,0	./.
chr10	27293067	.	T	TACAC	941.63	PASS	AB=0.782;AC=14;AF=0.280;AN=50;BaseQRankSum=-5.473;DP=502;FS=3.862;HRun=0;HaplotypeScore=105.6172;InbreedingCoeff=0.0664;MQ=57.77;MQ0=25;MQRankSum=1.343;QD=5.17;ReadPosRankSum=0.016;VQSLOD=1.9870;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:5.89:0,6,79	0/1:6,2:8:37.51:132,0,38	./.	./.	0/0:16,0:14:2.45:0,2,27	0/1:14,1:16:45.25:58,0,45	0/1:17,0:23:16.38:16,0,38	./.	0/0:14,0:14:17.96:0,18,162	0/0:12,0:12:0.41:0,0,24	0/0:6,0:6:6:0,6,54	0/0:11,0:16:36.25:0,36,294	1/1:10,0:10:2.74:12,3,0	0/1:9,0:13:6.49:6,0,41	1/1:10,4:15:6.23:84,6,0	0/0:13,0:13:11.05:0,11,118	0/1:14,11:30:4.42:312,0,4	0/0:11,0:10:11.25:0,11,77	0/0:13,0:13:12.80:0,13,77	0/0:11,0:11:8.21:0,8,72	0/0:26,0:25:17.39:0,17,148	0/1:6,0:11:9.92:10,0,118	0/1:8,1:14:33.33:83,0,33	1/1:12,10:24:14.30:360,14,0	0/0:14,0:14:17.81:0,18,152	0/0:16,0:16:19.83:0,20,171	0/1:16,0:15:12.18:12,0,22	0/0:6,0:6:3:0,3,28
chr10	27293723	.	CTCAATTATTCTTTTCTTTCTAA	C	26217.51	PASS	AC=28;AF=0.519;AN=54;BaseQRankSum=16.849;DP=565;FS=1.150;HRun=0;HaplotypeScore=339.8805;InbreedingCoeff=0.9621;MQ=81.90;MQ0=1;MQRankSum=-13.653;QD=94.31;ReadPosRankSum=2.420;VQSLOD=3.7700;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,10:14:24.08:1188,24,0	0/0:8,0:8:24.08:0,24,2126	0/0:22,0:22:56:0,56,3436	0/0:24,0:24:49.51:0,50,3650	1/1:4,18:22:48.08:2230,48,0	0/0:32,0:31:84.29:0,84,8241	0/0:25,0:25:72.25:0,72,6606	1/1:14,14:28:42.13:1667,42,0	1/1:7,7:14:18.06:1090,18,0	1/1:5,17:20:48.16:2855,48,0	1/1:7,24:31:54.19:2730,54,0	0/0:28,0:28:78.27:0,78,7272	0/0:28,0:28:78.27:0,78,7138	0/0:16,0:16:45.15:0,45,4519	0/0:21,0:21:63.22:0,63,6419	1/1:4,22:25:54.19:3211,54,0	0/0:16,0:16:48.16:0,48,4499	1/1:4,4:8:6.02:364,6,0	1/1:5,6:11:18.03:775,18,0	1/1:6,17:23:48.16:2592,48,0	1/1:6,4:10:4.26:320,4,0	0/0:24,0:24:72.25:0,72,6252	0/0:24,0:24:66.23:0,66,5745	0/0:17,0:17:51.18:0,51,4581	1/1:5,21:26:54.19:2895,54,0	1/1:9,13:21:36.12:1778,36,0	1/1:5,16:21:42.14:2523,42,0	./.
chr10	27293974	.	TCC	T	5060.23	PASS	AB=1.000;AC=54;AF=0.964;AN=56;BaseQRankSum=-3.861;DP=389;FS=20.329;HRun=3;HaplotypeScore=72.3580;InbreedingCoeff=0.1416;MQ=49.87;MQ0=30;MQRankSum=-0.424;QD=13.01;ReadPosRankSum=2.495;VQSLOD=0.7001;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:12:14.95:119,15,0	1/1:5,0:4:11.99:100,12,0	0/1:18,0:5:7.16:7,0,43	0/1:20,0:4:8.67:9,0,32	1/1:3,9:12:5.99:50,6,0	1/1:9,0:9:14.92:125,15,0	1/1:13,0:12:25.18:201,25,0	1/1:16,0:12:38.95:339,39,0	1/1:12,0:10:20.70:166,21,0	1/1:15,0:12:29.85:238,30,0	1/1:12,0:12:20.92:169,21,0	1/1:17,0:16:26.95:223,27,0	1/1:25,0:25:46.39:432,46,0	1/1:16,0:15:29.89:242,30,0	1/1:18,0:17:35.76:294,36,0	1/1:11,0:10:19.70:143,20,0	1/1:15,0:14:29.72:220,30,0	1/1:13,0:13:30.14:212,30,0	1/1:9,0:8:23.94:201,24,0	1/1:4,17:19:8.99:75,9,0	1/1:12,0:11:8.98:75,9,0	1/1:16,0:15:35.95:299,36,0	1/1:13,0:11:14.84:115,15,0	1/1:6,0:5:11.98:99,12,0	1/1:19,0:18:35.99:309,36,0	1/1:13,0:12:32.73:282,33,0	1/1:12,0:10:26.84:204,27,0	1/1:8,0:6:14.88:113,15,0
chr10	27296083	.	T	TACA	21416.06	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-5.383;DP=600;FS=1.001;HRun=0;HaplotypeScore=103.5081;InbreedingCoeff=0.9985;MQ=77.64;MQ0=0;MQRankSum=-7.677;QD=58.84;ReadPosRankSum=-1.020;VQSLOD=6.4378;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,16:16:48.16:1104,48,0	0/0:11,0:11:33.09:0,33,533	0/0:13,0:13:39.06:0,39,559	0/0:17,0:17:39.11:0,39,631	1/1:2,36:38:93.32:2110,93,0	0/0:27,0:27:72.22:0,72,1174	0/0:7,0:7:18.06:0,18,307	1/1:5,30:36:99:2185,108,0	1/1:1,17:19:45.15:1035,45,0	1/1:1,23:24:72.17:1509,72,0	1/1:0,25:25:60.16:1332,60,0	0/0:20,0:20:57.18:0,57,945	0/0:27,0:27:78.22:0,78,1247	0/0:16,0:16:48.15:0,48,792	0/0:24,0:24:69.24:0,69,1176	1/1:1,22:23:60.17:1331,60,0	0/0:25,0:25:72.22:0,72,1225	1/1:4,10:14:36.10:776,36,0	1/1:2,15:17:48.16:1043,48,0	1/1:4,23:27:75.26:1691,75,0	1/1:0,9:9:27.09:623,27,0	0/0:17,0:17:51.17:0,51,869	0/0:20,0:20:57.19:0,57,967	0/0:12,0:12:36.12:0,36,614	1/1:0,25:26:69.24:1589,69,0	1/1:2,31:35:99:2131,99,0	1/1:4,34:40:99:2335,102,0	1/1:4,11:15:27.09:622,27,0
chr10	27298966	.	C	CAG	25417.31	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=8.269;DP=679;FS=0.834;HRun=0;HaplotypeScore=112.3143;InbreedingCoeff=0.9934;MQ=84.88;MQ0=1;MQRankSum=-8.845;QD=44.05;ReadPosRankSum=3.447;VQSLOD=6.2558;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,25:31:66.08:1213,66,0	0/0:10,0:10:30.10:0,30,440	0/0:22,0:22:63.21:0,63,910	0/0:27,0:27:78.24:0,78,1095	1/1:2,13:16:29.96:559,30,0	1/1:1,29:30:78.27:1457,78,0	1/1:2,16:20:39.13:713,39,0	1/1:8,41:49:99:2420,135,0	1/1:1,31:33:90.31:1662,90,0	1/1:1,16:17:48.16:899,48,0	1/1:1,16:18:39.13:720,39,0	1/1:2,35:37:93.32:1739,93,0	1/1:3,25:28:69.24:1258,69,0	1/1:2,26:29:69.17:1264,69,0	0/0:28,0:28:84.28:0,84,1235	1/1:3,33:37:93.11:1703,93,0	0/0:15,0:15:45.15:0,45,661	1/1:1,7:8:16.61:285,17,0	1/1:2,21:23:69.24:1259,69,0	1/1:2,25:27:66.23:1231,66,0	1/1:1,27:29:57.08:1067,57,0	1/1:1,14:14:33.08:616,33,0	1/1:0,17:17:39.13:728,39,0	1/1:1,19:21:36.12:674,36,0	1/1:1,26:27:54.19:1010,54,0	1/1:1,25:28:81.25:1443,81,0	1/1:2,27:29:66.23:1234,66,0	1/1:4,4:8:15.05:262,15,0
chr10	27300512	.	TAAAA	T	7739.30	PASS	AB=1.000;AC=47;AF=0.839;AN=56;BaseQRankSum=-2.701;DP=414;FS=0.716;HRun=15;HaplotypeScore=83.5412;InbreedingCoeff=0.7667;MQ=64.84;MQ0=1;MQRankSum=-3.075;QD=21.44;ReadPosRankSum=2.025;VQSLOD=3.9169;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,7:10:27.03:333,27,0	0/0:1,0:11:23.99:0,24,278	0/0:15,0:6:6.01:0,6,62	0/1:7,0:6:15.56:16,0,24	1/1:9,15:26:38.85:499,39,0	1/1:1,0:13:32.87:260,33,0	1/1:5,0:11:11.89:94,12,0	1/1:14,20:34:55.76:725,56,0	1/1:1,12:13:30.08:409,30,0	1/1:6,13:19:41.95:512,42,0	1/1:4,11:15:26.95:368,27,0	1/1:4,0:18:26.87:213,27,0	1/1:1,0:13:32.55:247,33,0	1/1:3,0:13:23.85:189,24,0	0/0:4,0:13:27:0,27,329	1/1:2,10:13:30.07:392,30,0	0/0:5,0:14:32.72:0,33,301	1/1:1,9:11:24.01:309,24,0	1/1:4,11:15:34.30:449,34,0	1/1:5,12:16:29.96:409,30,0	1/1:2,2:4:2.93:41,3,0	1/1:1,0:9:11.17:112,11,0	1/1:1,0:18:35.84:284,36,0	1/1:4,0:10:11.94:95,12,0	1/1:3,19:22:36.96:528,37,0	1/1:2,16:20:49.21:603,49,0	1/1:4,15:19:39.02:531,39,0	1/1:2,9:11:8.96:123,9,0
chr10	27301395	.	CA	C	8638.47	PASS	AC=44;AF=0.815;AN=54;BaseQRankSum=7.267;DP=414;FS=7.825;HRun=8;HaplotypeScore=44.1294;InbreedingCoeff=0.9924;MQ=77.23;MQ0=0;MQRankSum=-3.262;QD=25.48;ReadPosRankSum=0.236;VQSLOD=5.2191;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,11:11:30.05:290,30,0	0/0:10,0:10:30.09:0,30,362	0/0:12,0:12:20.55:0,21,199	0/0:8,0:8:21.06:0,21,236	1/1:0,19:19:51.08:492,51,0	1/1:1,15:16:45.07:435,45,0	1/1:2,11:13:30.04:290,30,0	1/1:3,25:28:75.08:712,75,0	1/1:1,12:13:30.05:290,30,0	1/1:3,18:21:54.08:521,54,0	1/1:2,14:16:42.07:406,42,0	1/1:3,14:17:42.06:406,42,0	1/1:0,19:19:54.09:521,54,0	1/1:0,9:9:27.04:261,27,0	0/0:17,0:17:51.16:0,51,616	1/1:0,16:16:45.07:434,45,0	0/0:28,0:28:75.23:0,75,906	1/1:2,10:12:30.05:290,30,0	1/1:3,16:19:51.07:488,51,0	1/1:2,16:18:42.06:406,42,0	1/1:0,5:5:15.02:145,15,0	1/1:0,8:8:24.04:232,24,0	1/1:0,8:8:24.04:232,24,0	1/1:1,14:15:42.07:406,42,0	1/1:2,17:19:45.07:435,45,0	1/1:1,20:21:60.08:573,60,0	1/1:0,16:16:39.06:377,39,0	./.
chr10	27305115	.	AGT	A	295.79	PASS	AB=0.856;AC=18;AF=0.429;AN=42;BaseQRankSum=-1.861;DP=370;FS=4.233;HRun=0;HaplotypeScore=52.3116;InbreedingCoeff=0.1527;MQ=62.58;MQ0=16;MQRankSum=-0.473;QD=1.95;ReadPosRankSum=-0.092;VQSLOD=1.2942;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:19:0.74:31,1,0	./.	./.	./.	0/1:5,3:9:12.23:26,0,12	0/0:17,0:14:11.39:0,11,121	0/0:11,0:10:12.11:0,12,103	0/0:15,0:15:0:0,0,0	0/1:6,2:8:9.08:55,0,9	1/1:4,3:7:3:32,3,0	1/1:4,0:4:3.88:26,4,0	0/0:12,0:12:12.49:0,12,158	0/0:13,0:13:11.73:0,12,117	0/0:14,0:14:12.03:0,12,153	0/1:9,1:10:19.54:27,0,20	1/1:6,1:6:2.99:32,3,0	0/0:24,0:25:31.31:0,31,373	0/1:17,8:25:21.84:53,0,22	./.	1/1:6,0:6:0.47:1,0,0	0/1:39,1:40:45.77:46,0,67	./.	0/0:4,0:4:2.98:0,3,21	0/0:15,0:21:8.18:0,8,64	./.	0/1:8,0:8:10.49:45,0,10	1/1:7,1:8:10.11:56,10,0	./.
chr10	27307776	.	T	TG	7042.19	PASS	AB=0.689;AC=43;AF=0.768;AN=56;BaseQRankSum=-8.369;DP=491;FS=17.322;HRun=9;HaplotypeScore=84.9269;InbreedingCoeff=0.3992;MQ=73.14;MQ0=1;MQRankSum=-0.174;QD=16.93;ReadPosRankSum=-0.417;VQSLOD=3.5975;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,12:19:1.06:239,1,0	0/0:7,0:7:21:0,21,182	0/0:25,0:15:1.94:0,2,98	0/1:22,0:16:28.01:34,0,28	0/1:7,14:21:10.98:235,0,11	0/1:5,7:12:1.45:118,0,1	1/1:10,10:20:43.04:425,43,0	1/1:8,13:22:34.94:342,35,0	1/1:1,12:13:30.08:332,30,0	1/1:5,4:9:12:120,12,0	1/1:4,15:19:39.99:432,40,0	1/1:2,14:16:13.65:373,14,0	0/1:5,14:19:24.35:352,0,24	1/1:5,15:21:1.07:226,1,0	0/0:17,0:17:41.58:0,42,347	1/1:1,18:19:45.02:497,45,0	0/0:26,0:26:62.63:0,63,525	1/1:2,11:13:21.06:232,21,0	1/1:5,12:17:36:353,36,0	1/1:8,17:25:21.72:392,22,0	1/1:0,10:10:21.06:232,21,0	1/1:7,15:22:12.85:308,13,0	0/1:6,8:14:30.86:203,0,31	1/1:1,8:9:18.05:199,18,0	1/1:6,5:11:8.94:99,9,0	1/1:7,10:17:26.88:261,27,0	1/1:5,31:36:75.10:828,75,0	1/1:2,8:10:20.85:211,21,0
chr10	27308056	.	AT	A	1662.86	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=4.462;DP=633;FS=4.692;HRun=7;HaplotypeScore=72.3650;InbreedingCoeff=0.9937;MQ=88.13;MQ0=0;MQRankSum=-1.436;QD=24.45;ReadPosRankSum=1.900;VQSLOD=4.3944;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:84.24:0,84,1030	1/1:1,11:12:30.07:306,30,0	0/0:19,0:19:51.14:0,51,607	0/0:26,0:26:63.15:0,63,737	0/0:26,0:26:78.25:0,78,981	0/0:24,0:24:66.20:0,66,819	0/0:23,0:23:60.18:0,60,741	0/0:30,0:30:75.22:0,75,921	0/0:27,0:27:78.25:0,78,981	0/0:16,0:16:48.13:0,48,588	0/0:22,0:22:66.21:0,66,830	0/0:20,0:20:54.15:0,54,655	0/0:29,0:29:81.25:0,81,1007	0/0:21,0:21:63.16:0,63,773	1/1:1,25:26:66.15:673,66,0	0/0:33,0:32:96.30:0,96,1196	1/1:2,28:30:81.18:826,81,0	0/0:5,0:5:15.04:0,15,176	0/0:27,0:27:72.22:0,72,894	0/0:22,0:22:66.21:0,66,830	0/0:14,0:14:33.11:0,33,415	0/0:16,0:16:45.14:0,45,566	0/0:18,0:18:48.15:0,48,594	0/0:30,0:30:90.29:0,90,1132	0/0:25,0:25:72.23:0,72,905	0/0:23,0:23:66.21:0,66,830	0/0:30,0:30:82.96:0,83,1040	0/0:9,0:9:27.02:0,27,318
chr10	27308464	.	GT	G	6386.23	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=17.336;DP=608;FS=10.057;HRun=2;HaplotypeScore=76.7627;InbreedingCoeff=0.9992;MQ=85.45;MQ0=0;MQRankSum=-6.349;QD=36.29;ReadPosRankSum=2.603;VQSLOD=5.1043;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:66.22:0,66,987	0/0:16,0:16:48.16:0,48,720	0/0:14,0:14:42.12:0,42,595	0/0:25,0:25:44.47:0,44,848	0/0:36,0:36:99:0,108,1577	1/1:1,25:26:75.24:974,75,0	1/1:0,17:17:42.14:545,42,0	0/0:33,0:33:99:0,99,1483	0/0:15,0:15:45.13:0,45,637	0/0:35,0:35:99:0,102,1513	0/0:28,0:28:81.26:0,81,1175	1/1:1,30:31:84.27:1090,84,0	1/1:0,29:29:87.28:1129,87,0	1/1:1,27:28:78.25:1012,78,0	0/0:19,0:19:57.19:0,57,855	0/0:25,0:25:75.24:0,75,1104	0/0:17,0:17:51.17:0,51,764	0/0:11,0:11:33.11:0,33,494	0/0:19,0:19:54.18:0,54,809	0/0:26,0:26:78.26:0,78,1151	0/0:10,0:10:30.09:0,30,431	1/1:0,22:22:66.21:857,66,0	1/1:0,14:14:39.13:507,39,0	1/1:1,8:9:21.07:273,21,0	0/0:21,0:21:63.19:0,63,922	0/0:20,0:20:60.19:0,60,862	0/0:23,0:23:69.23:0,69,1030	0/0:16,0:16:48.16:0,48,711
chr10	27309699	.	T	TG	1001.88	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-7.786;DP=518;FS=2.997;HRun=8;HaplotypeScore=53.4381;InbreedingCoeff=0.9820;MQ=82.26;MQ0=0;MQRankSum=-1.246;QD=23.30;ReadPosRankSum=0.427;VQSLOD=4.1496;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:51.03:0,51,466	1/1:1,8:9:15.04:173,15,0	0/0:21,0:21:22.30:0,22,238	0/0:14,0:14:13.30:0,13,205	0/0:23,0:23:69.04:0,69,631	0/0:20,0:20:45.01:0,45,411	0/0:22,0:22:60.03:0,60,549	0/0:29,0:29:51:0,51,466	0/0:18,0:18:47.95:0,48,421	0/0:21,0:21:54.02:0,54,490	0/0:19,0:19:51.02:0,51,464	0/0:17,0:17:48.01:0,48,435	0/0:19,0:19:51.01:0,51,462	0/0:16,0:16:42:0,42,378	1/1:4,13:17:39.12:450,39,0	0/0:18,0:18:51.02:0,51,463	1/1:0,17:17:45.13:519,45,0	0/0:14,0:14:30:0,30,274	0/0:23,0:23:48:0,48,430	0/0:27,0:27:60.01:0,60,544	0/0:13,0:13:39:0,39,351	0/0:18,0:18:42.01:0,42,384	0/0:18,2:20:19.41:0,19,432	0/0:13,0:12:32.97:0,33,293	0/0:22,0:22:28.58:0,29,437	0/0:13,0:13:36.01:0,36,327	0/0:22,0:21:63.03:0,63,576	0/0:14,0:14:29.95:0,30,262
chr10	27311361	.	G	GA	2086.36	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-10.976;DP=687;FS=5.473;HRun=7;HaplotypeScore=78.5950;InbreedingCoeff=0.9984;MQ=83.15;MQ0=0;MQRankSum=0.044;QD=28.98;ReadPosRankSum=0.364;VQSLOD=4.1073;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,153,1463	1/1:0,8:8:21.06:254,21,0	0/0:25,0:25:48.03:0,48,449	0/0:24,0:24:40.17:0,40,342	0/0:15,0:15:45.07:0,45,434	0/0:20,0:20:60.07:0,60,570	0/0:28,0:28:75.07:0,75,707	0/0:44,0:44:99:0,111,1069	0/0:24,0:24:69.09:0,69,659	0/0:26,0:26:63.08:0,63,603	0/0:18,0:18:42.06:0,42,405	0/0:28,0:28:69.08:0,69,660	0/0:18,0:18:51.08:0,51,492	0/0:23,0:23:60.05:0,60,573	1/1:3,30:33:84.19:996,84,0	0/0:27,0:27:78.12:0,78,749	1/1:3,28:31:81.25:979,81,0	0/0:17,0:17:45.02:0,45,425	0/0:21,0:21:51.08:0,51,493	0/0:18,0:18:48.07:0,48,463	0/0:29,0:29:78.09:0,78,741	0/0:29,0:29:81.13:0,81,781	0/0:18,0:18:42.07:0,42,405	0/0:20,0:20:57.07:0,57,543	0/0:21,0:21:54.09:0,54,521	0/0:26,0:26:72.10:0,72,690	0/0:29,0:29:75.12:0,75,724	0/0:13,0:13:33.05:0,33,319
chr10	27311671	.	C	CTCTG	1960.65	PASS	AB=1.000;AC=20;AF=0.357;AN=56;BaseQRankSum=11.791;DP=655;FS=0.885;HRun=0;HaplotypeScore=140.1304;InbreedingCoeff=0.7064;MQ=68.44;MQ0=25;MQRankSum=-2.002;QD=7.16;ReadPosRankSum=1.247;VQSLOD=2.3758;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:33:21.47:0,21,299	0/0:5,0:5:9.47:0,9,97	0/0:27,0:20:47.01:0,47,471	0/0:40,0:33:70.32:0,70,627	0/0:26,0:24:52.04:0,52,405	1/1:18,1:17:32.96:331,33,0	1/1:19,0:16:32.95:273,33,0	0/0:34,0:33:80.45:0,80,669	0/0:22,0:22:50.59:0,51,608	0/0:31,0:31:10.89:0,11,537	0/0:22,0:20:32.90:0,33,265	1/1:17,1:15:24.15:259,24,0	1/1:31,1:31:62.76:535,63,0	1/1:17,0:15:20.68:146,21,0	0/0:20,0:20:54.03:0,54,600	0/1:23,0:22:11.83:12,0,318	0/0:11,0:11:25.96:0,26,236	0/0:16,0:15:15.25:0,15,306	0/1:21,0:20:0.56:1,0,232	0/0:21,0:21:41.94:0,42,346	0/0:36,0:33:35.95:0,36,456	1/1:27,0:23:27.62:207,28,0	1/1:14,0:14:20.95:169,21,0	1/1:19,1:19:14.85:148,15,0	0/0:23,0:23:45.90:0,46,358	0/1:33,0:30:36.25:36,0,420	0/1:31,0:30:48.37:48,0,314	0/0:12,0:10:26.88:0,27,219
chr10	27311673	.	C	CTG	1657.34	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=11.534;DP=663;FS=0.931;HRun=0;HaplotypeScore=116.5044;InbreedingCoeff=0.9889;MQ=65.74;MQ0=30;MQRankSum=-2.333;QD=9.75;ReadPosRankSum=2.141;VQSLOD=3.6263;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:33:38.81:0,39,310	0/0:5,0:5:11.87:0,12,98	0/0:25,0:18:47.01:0,47,471	0/0:39,0:32:69.63:0,70,627	0/0:27,0:24:53.17:0,53,410	1/1:19,0:17:32.96:292,33,0	1/1:21,0:17:32.94:273,33,0	0/0:36,0:35:91.41:0,91,739	0/0:24,0:24:50.91:0,51,504	0/0:31,0:31:47.23:0,47,586	0/0:23,0:21:32.90:0,33,265	1/1:17,1:15:24.14:225,24,0	1/1:31,1:31:46.68:428,47,0	1/1:17,0:15:20.68:146,21,0	0/0:21,0:20:54:0,54,503	0/0:24,0:22:43.24:0,43,369	0/0:11,0:11:23.92:0,24,214	0/0:18,0:17:31.21:0,31,288	0/0:21,0:19:42.71:0,43,312	0/0:18,0:18:41.94:0,42,346	0/0:35,0:32:58.89:0,59,482	1/1:26,2:24:27.64:206,28,0	1/1:14,1:15:20.95:169,21,0	1/1:19,1:18:14.47:124,14,0	0/0:23,0:23:36.88:0,37,338	0/0:33,0:30:48.97:0,49,502	0/0:31,0:30:53.69:0,54,398	0/0:12,0:10:26.95:0,27,219
chr10	27311735	.	CACAGACAGACAGACACACACACACACAG	C	1244.98	PASS	AB=1.000;AC=29;AF=0.630;AN=46;BaseQRankSum=-0.371;DP=455;FS=2.977;HRun=0;HaplotypeScore=142.4584;InbreedingCoeff=0.2354;MQ=30.48;MQ0=78;MQRankSum=-0.139;QD=5.08;ReadPosRankSum=2.993;VQSLOD=2.8115;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:22:2.51:0,3,7	0/0:4,0:3:3.01:0,3,54	0/0:26,0:5:2.22:0,2,7	0/0:49,0:5:5.23:0,5,52	./.	1/1:12,0:9:0.39:1,0,0	./.	1/1:18,0:11:5.97:48,6,0	1/1:16,0:16:2.53:47,3,0	1/1:19,0:14:12.64:357,13,0	1/1:7,0:4:0.47:1,0,0	0/0:15,0:9:0.47:0,0,1	0/1:18,0:15:23.97:24,0,103	0/1:10,0:7:0.04:0,0,0	1/1:14,0:13:1.59:4,2,0	0/1:15,0:12:31.92:50,0,32	0/1:13,0:10:26.74:27,0,27	1/1:11,0:7:5.71:33,6,0	1/1:12,10:18:23.77:429,24,0	./.	./.	0/0:17,0:13:0.21:0,0,0	./.	1/1:20,0:15:3.34:18,3,0	0/1:9,0:8:0:0,0,0	1/1:22,0:19:9.35:182,9,0	1/1:12,0:8:2.73:14,3,0	1/1:6,0:3:6.02:127,6,0
chr10	27311737	.	CAG	C	183.69	PASS	AB=0.917;AC=26;AF=0.500;AN=52;BaseQRankSum=2.927;DP=453;FS=7.910;HRun=0;HaplotypeScore=75.5780;InbreedingCoeff=0.3648;MQ=29.89;MQ0=83;MQRankSum=-1.078;QD=0.78;ReadPosRankSum=-1.970;VQSLOD=0.3426;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:21:14.82:0,15,162	1/1:2,1:3:2.96:19,3,0	0/0:27,0:5:14.89:0,15,147	0/0:52,0:5:8.31:0,8,67	1/1:11,0:9:1.25:3,1,0	0/1:8,2:8:0.02:0,0,0	1/1:15,3:10:2.22:8,2,0	0/0:19,0:11:18.06:0,18,264	0/1:14,1:15:6.19:6,0,69	0/1:17,0:12:2.16:2,0,171	0/1:7,0:4:0:0,0,0	1/1:12,3:9:2.79:17,3,0	1/1:13,4:15:9.42:82,9,0	0/1:7,2:6:0.05:0,0,0	1/1:11,2:13:12.28:81,12,0	0/0:14,0:11:5.96:0,6,52	0/1:12,1:9:6.63:44,0,7	0/0:12,0:7:5.91:0,6,61	0/0:21,0:17:5.34:0,5,219	./.	1/1:26,0:19:2.74:12,3,0	1/1:12,5:13:0.89:2,1,0	./.	0/1:16,2:14:0.04:0,0,0	1/1:9,0:8:3.01:35,3,0	0/0:21,0:18:20:0,20,385	0/1:12,0:8:13.34:13,0,55	0/0:6,0:3:5.23:0,5,39
chr10	27311741	.	CAG	C	145.16	PASS	AB=0.950;AC=20;AF=0.400;AN=50;BaseQRankSum=3.476;DP=439;FS=0.000;HRun=0;HaplotypeScore=69.7761;InbreedingCoeff=0.2826;MQ=29.43;MQ0=82;MQRankSum=-1.320;QD=0.75;ReadPosRankSum=-2.051;VQSLOD=1.1993;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:18:15.05:0,15,262	1/1:3,0:3:2.94:18,3,0	0/0:29,0:5:15.05:0,15,246	0/0:56,0:5:5.51:0,6,65	./.	0/1:12,1:8:0:0,0,0	0/1:16,2:10:0:0,0,0	0/0:17,0:10:10.42:0,10,353	0/1:14,0:14:7.46:7,0,88	0/0:18,0:12:26.67:0,27,331	0/1:6,0:4:0:0,0,0	1/1:11,1:6:2.79:17,3,0	0/1:15,1:13:22.25:74,0,22	1/1:10,0:6:0.29:1,0,0	1/1:13,0:12:11.44:71,11,0	0/0:13,0:10:6.02:0,6,89	0/1:13,0:9:10.05:43,0,10	0/0:11,0:6:8.99:0,9,84	0/0:21,0:17:26.69:0,27,427	./.	1/1:26,0:19:2.74:12,3,0	1/1:16,1:13:0.89:2,1,0	./.	0/1:15,2:12:0.04:0,0,0	0/0:9,0:8:2.60:0,3,10	0/0:18,0:15:18.53:0,19,452	0/1:12,0:8:26.62:27,0,90	0/0:6,0:3:0.02:0,0,50
chr10	27311761	.	CAGACAGACAGACAG	C	1443.79	PASS	AB=0.951;AC=22;AF=0.407;AN=54;BaseQRankSum=0.569;DP=421;FS=1.530;HRun=0;HaplotypeScore=121.9849;InbreedingCoeff=-0.2957;MQ=36.01;MQ0=69;MQRankSum=-5.106;QD=5.29;ReadPosRankSum=3.328;VQSLOD=2.3408;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:19:24.14:0,24,324	1/1:5,0:4:2.74:63,3,0	./.	0/0:31,0:2:3.01:0,3,45	0/0:7,10:17:15.04:0,15,369	0/1:16,0:13:4.27:36,0,4	0/0:18,0:13:11.71:0,12,125	0/1:18,0:5:36.20:36,0,59	0/1:20,0:20:47.94:48,0,407	0/1:11,0:7:44.21:299,0,44	0/0:8,0:7:5.68:0,6,121	0/0:15,0:11:2.90:0,3,16	0/1:18,0:15:46.78:47,0,143	1/1:9,0:6:2.11:26,2,0	0/1:13,0:11:4.70:54,0,5	0/1:13,0:12:44.58:45,0,218	0/1:13,0:10:83.72:99,0,84	0/1:14,0:9:34.48:34,0,431	0/1:13,0:11:97.55:379,0,98	0/0:7,5:12:6.02:0,6,161	0/1:32,0:25:41.01:41,0,483	0/1:14,0:13:32.40:47,0,32	0/1:9,0:6:25.30:25,0,35	0/1:15,0:12:5.52:6,0,10	0/0:12,0:12:12.04:0,12,245	0/1:11,7:14:99:163,0,319	0/1:8,0:6:1.93:2,0,230	1/1:4,0:3:6.02:145,6,0
chr10	27311773	.	CAG	C	611.37	PASS	AB=0.975;AC=23;AF=0.442;AN=52;BaseQRankSum=6.508;DP=439;FS=6.102;HRun=0;HaplotypeScore=107.3785;InbreedingCoeff=-0.2917;MQ=37.61;MQ0=65;MQRankSum=-2.090;QD=2.14;ReadPosRankSum=2.124;VQSLOD=1.7011;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:21,1:19:49.32:49,0,66	1/1:1,3:3:2.99:34,3,0	./.	./.	0/0:17,0:17:0.86:0,1,71	0/1:16,0:13:26.78:28,0,27	0/1:23,0:14:16.19:33,0,16	0/0:22,0:9:11.97:0,12,124	0/1:23,0:23:51.99:52,0,144	0/1:14,0:6:14.41:71,0,14	0/1:10,0:9:12.99:13,0,85	0/1:21,0:16:18.85:19,0,40	0/1:18,0:15:13.52:74,0,14	1/1:10,1:8:2.66:24,3,0	0/1:8,8:13:25.29:115,0,25	0/0:19,0:17:6.96:0,7,159	0/1:17,0:12:18.79:19,0,84	0/0:16,0:10:13.50:0,13,186	0/1:13,0:12:18.19:82,0,18	0/0:14,0:14:7.81:0,8,50	0/0:32,0:23:8.66:0,9,76	0/1:12,0:12:19.17:27,0,19	1/1:15,0:12:4.94:20,5,0	1/1:17,0:14:5.64:43,6,0	0/1:13,0:12:1.16:1,0,23	0/1:16,0:12:24.65:25,0,108	0/0:14,0:12:17.95:0,18,241	0/1:5,0:4:21.56:33,0,22
chr10	27311775	.	GAC	G	910.60	PASS	AB=0.889;AC=26;AF=0.500;AN=52;BaseQRankSum=4.105;DP=461;FS=3.275;HRun=0;HaplotypeScore=110.9777;InbreedingCoeff=-0.2472;MQ=38.14;MQ0=64;MQRankSum=1.133;QD=2.48;ReadPosRankSum=1.410;VQSLOD=2.0427;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:20,4:21:65.45:65,0,109	1/1:4,0:3:2.88:16,3,0	./.	./.	0/1:16,1:17:17.94:18,0,113	0/1:11,6:14:5.79:63,0,6	0/1:17,6:14:30.43:145,0,30	0/1:23,0:10:9.55:10,0,102	0/1:23,2:25:86.16:86,0,222	0/1:13,2:7:23.85:24,0,60	0/0:11,0:10:12.02:0,12,168	0/1:12,10:18:34.64:85,0,35	1/1:11,8:16:9.10:157,9,0	1/1:8,3:8:2.67:33,3,0	0/1:18,0:15:42.34:42,0,51	0/1:17,2:17:7.27:7,0,232	0/1:16,1:12:44.70:45,0,143	0/1:18,0:12:2.29:2,0,288	0/0:15,0:14:5.99:0,6,63	0/0:15,0:15:8.91:0,9,85	0/1:33,1:25:9.08:9,0,151	0/1:8,3:11:1.41:86,0,1	1/1:7,8:12:5.84:66,6,0	1/1:13,4:14:5.57:66,6,0	0/1:11,1:11:15.32:15,0,92	0/0:16,0:12:17.98:0,18,202	0/0:15,0:13:30.04:0,30,360	0/1:5,1:5:24.47:24,0,44
chr10	27312325	.	A	AT	1529.82	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-8.601;DP=600;FS=7.318;HRun=9;HaplotypeScore=55.7733;InbreedingCoeff=0.9796;MQ=68.30;MQ0=0;MQRankSum=0.521;QD=24.67;ReadPosRankSum=0.042;VQSLOD=4.2737;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:71.97:0,72,625	1/1:1,6:7:18.05:199,18,0	0/0:10,0:10:17.42:0,17,149	0/0:4,0:6:10.81:0,11,82	0/0:25,0:25:56.93:0,57,489	0/0:23,0:23:56.94:0,57,487	0/0:22,0:22:62.95:0,63,540	0/0:43,0:43:99:0,105,899	0/0:27,0:27:53.79:0,54,531	0/0:23,0:23:59.98:0,60,521	0/0:26,0:26:68.98:0,69,599	0/0:21,0:21:53.99:0,54,469	0/0:28,0:28:77.96:0,78,674	0/0:20,0:20:59.93:0,60,511	1/1:3,28:31:82.11:898,82,0	0/0:20,0:20:47.96:0,48,413	1/1:4,20:23:54.06:574,54,0	0/0:19,0:19:44.94:0,45,384	0/0:16,0:16:41.98:0,42,365	0/0:22,0:22:62.72:0,63,529	0/0:23,0:23:56.98:0,57,492	0/0:20,0:20:53.96:0,54,465	0/0:13,0:13:38.98:0,39,336	0/0:11,0:10:32.99:0,33,287	0/0:23,0:23:68.96:0,69,594	0/0:20,0:20:53.99:0,54,469	0/0:31,0:31:74.94:0,75,647	0/0:18,0:18:53.99:0,54,469
chr10	27313199	.	G	GAAAAAA	16386.35	PASS	AB=0.693;AC=49;AF=0.875;AN=56;BaseQRankSum=-0.850;DP=567;FS=3.154;HRun=11;HaplotypeScore=168.0987;InbreedingCoeff=0.4856;MQ=65.41;MQ0=1;MQRankSum=-4.315;QD=32.07;ReadPosRankSum=-4.212;VQSLOD=0.8562;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:27,1:40:48.12:1177,48,0	0/1:0,0:3:10.91:11,0,21	0/0:26,0:19:19.47:0,19,242	0/1:20,0:13:29.65:30,0,84	1/1:13,0:27:60.20:1182,60,0	1/1:5,0:21:27.09:464,27,0	1/1:4,0:15:21.06:287,21,0	1/1:11,0:26:68.98:1199,69,0	1/1:9,0:14:15.05:338,15,0	1/1:21,0:21:45.08:1004,45,0	1/1:17,0:16:36.03:742,36,0	1/1:8,1:17:27.09:448,27,0	1/1:7,0:14:21.04:353,21,0	0/1:8,0:29:19.47:417,0,19	1/1:8,0:19:8.92:48,9,0	1/1:12,0:13:33.11:827,33,0	0/0:3,0:30:50.82:0,51,327	1/1:19,0:18:45.11:1019,45,0	1/1:21,0:21:37.16:923,37,0	1/1:10,1:14:27.06:667,27,0	1/1:9,0:9:5.98:73,6,0	1/1:9,0:15:27:395,27,0	1/1:3,0:14:15.05:243,15,0	1/1:10,0:28:30.09:480,30,0	1/1:19,0:19:42.14:1014,42,0	1/1:22,0:30:71.23:1739,71,0	1/1:13,0:21:33.08:751,33,0	1/1:15,0:15:24.04:554,24,0
chr10	27314458	.	G	GT	1654.90	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-9.037;DP=674;FS=1.989;HRun=5;HaplotypeScore=61.7484;InbreedingCoeff=0.9980;MQ=86.01;MQ0=0;MQRankSum=-1.629;QD=32.45;ReadPosRankSum=2.017;VQSLOD=4.4009;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,108,1147	1/1:0,10:10:27.09:355,27,0	0/0:22,0:22:60.10:0,60,617	0/0:21,0:21:54.13:0,54,579	0/0:27,0:27:72.15:0,72,757	0/0:25,0:25:75.17:0,75,797	0/0:37,0:37:96.15:0,96,990	0/0:22,0:22:57.12:0,57,597	0/0:28,0:28:75.16:0,75,796	0/0:17,0:17:42.08:0,42,443	0/0:8,0:8:24.04:0,24,249	0/0:21,0:21:54.12:0,54,567	0/0:28,0:28:69.13:0,69,729	0/0:28,0:28:81.16:0,81,851	0/0:31,0:31:90.22:0,90,960	0/0:29,0:29:84.21:0,84,903	1/1:1,40:41:99:1421,108,0	0/0:17,0:17:42.10:0,42,451	0/0:13,0:13:33.06:0,33,345	0/0:19,0:19:54.10:0,54,563	0/0:35,0:35:99:0,99,1028	0/0:28,0:28:78.18:0,78,828	0/0:11,0:11:33.07:0,33,346	0/0:40,0:40:99:0,108,1134	0/0:18,0:18:51.13:0,51,548	0/0:22,0:22:60.14:0,60,636	0/0:26,0:26:72.16:0,72,764	0/0:12,0:12:36.09:0,36,387
chr10	27315123	.	CAGAG	C	283.86	PASS	AB=0.919;AC=17;AF=0.340;AN=50;BaseQRankSum=2.575;DP=366;FS=3.878;HRun=0;HaplotypeScore=76.1186;InbreedingCoeff=0.2154;MQ=72.57;MQ0=4;MQRankSum=0.668;QD=1.87;ReadPosRankSum=-0.401;VQSLOD=1.5159;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:0:0,0,0	0/0:7,0:9:8.48:0,8,48	./.	./.	0/0:19,0:19:6.02:0,6,132	0/1:17,0:16:14.96:15,0,58	1/1:12,2:14:6.02:92,6,0	0/0:24,0:23:13.29:0,13,234	0/0:11,0:11:18.06:0,18,364	./.	1/1:13,0:14:6:53,6,0	1/1:11,2:13:3.01:46,3,0	0/0:8,0:9:5.75:0,6,53	0/0:13,0:12:5.98:0,6,60	0/1:9,1:10:11.98:40,0,12	1/1:8,1:9:3:46,3,0	0/1:8,1:11:36.98:37,0,46	0/0:12,0:12:17.76:0,18,262	0/0:14,0:13:3.01:0,3,39	0/0:18,0:18:6.01:0,6,68	0/0:9,0:8:6.02:0,6,109	0/1:8,1:9:0:0,0,0	1/1:16,1:17:3.01:46,3,0	0/1:9,0:10:16.15:16,0,63	0/1:15,0:15:0:0,0,0	0/0:9,0:9:9.50:0,10,159	0/1:12,1:13:31.10:31,0,168	0/0:3,0:3:6.02:0,6,133
chr10	27317431	.	C	CCT	254.53	PASS	AB=0.576;AC=3;AF=0.054;AN=56;BaseQRankSum=0.293;DP=574;FS=2.157;HRun=0;HaplotypeScore=96.8570;InbreedingCoeff=0.5877;MQ=70.68;MQ0=0;MQRankSum=0.480;QD=5.42;ReadPosRankSum=-3.801;VQSLOD=1.3954;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:2,0:23:41.99:0,42,125	0/0:2,0:8:19.32:0,19,93	0/0:11,0:10:20.99:0,21,235	0/0:7,0:7:14.09:0,14,193	0/0:4,0:32:60.60:0,61,236	0/0:27,0:27:81.22:0,81,1191	0/0:16,0:16:48.14:0,48,721	0/0:6,0:28:29.53:0,30,276	0/0:3,0:15:33.24:0,33,150	0/0:6,0:38:59.25:0,59,345	0/0:3,0:22:44.15:0,44,205	0/0:20,0:22:65.43:0,65,1001	0/0:21,0:21:63.17:0,63,922	0/0:19,0:19:54.09:0,54,754	1/1:1,1:28:26.01:343,26,0	0/0:4,0:21:19.24:0,19,159	0/0:6,0:26:21.40:0,21,201	0/0:1,0:14:32.05:0,32,125	0/1:5,0:18:15.25:15,0,176	0/0:1,0:25:6.16:0,6,136	0/0:1,0:17:31.68:0,32,112	0/0:21,0:21:63.21:0,63,994	0/0:25,0:25:68.95:0,69,1008	0/0:6,0:6:18.04:0,18,241	0/0:4,0:19:41.06:0,41,199	0/0:6,0:25:54.61:0,55,321	0/0:3,0:28:47.40:0,47,180	0/0:4,0:11:24.52:0,25,143
chr10	27318053	.	TTATATATATATATATATA	T	2134.88	PASS	AC=18;AF=0.643;AN=28;BaseQRankSum=0.223;DP=158;FS=2.114;HRun=0;HaplotypeScore=75.3060;InbreedingCoeff=0.4055;MQ=75.78;MQ0=3;MQRankSum=-0.414;QD=27.73;ReadPosRankSum=1.432;VQSLOD=1.9978;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:4:2.68:11,3,0	./.	./.	0/0:14,0:7:1.72:0,2,4	1/1:4,0:6:6.02:251,6,0	0/0:3,0:6:3:0,3,25	0/0:3,0:4:3.01:0,3,66	1/1:27,0:27:2.76:53,3,0	1/1:2,3:6:9.03:418,9,0	1/1:3,2:5:6.02:191,6,0	./.	0/0:2,0:2:3.01:0,3,104	./.	0/0:4,0:4:3:0,3,25	./.	1/1:3,1:4:3.01:146,3,0	./.	./.	./.	./.	./.	./.	./.	./.	1/1:4,2:6:3.01:146,3,0	./.	1/1:5,3:8:3.01:146,3,0	1/1:2,9:11:18.06:877,18,0
chr10	27318614	.	C	CCTT	32147.28	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-0.853;DP=588;FS=5.976;HRun=0;HaplotypeScore=112.3298;InbreedingCoeff=0.9803;MQ=77.29;MQ0=0;MQRankSum=-10.536;QD=59.42;ReadPosRankSum=3.384;VQSLOD=6.3681;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,8:11:27.05:532,27,0	1/1:2,6:8:24.08:497,24,0	0/0:31,0:31:75.24:0,75,1196	0/0:16,0:16:44.18:0,44,651	1/1:6,23:29:84.29:1761,84,0	1/1:3,18:21:63.17:1293,63,0	1/1:4,13:17:45.14:920,45,0	1/1:13,24:37:99:2219,102,0	1/1:7,16:23:63.19:1264,63,0	1/1:6,15:22:66.21:1390,66,0	1/1:4,14:18:51.07:967,51,0	1/1:6,22:28:81.25:1700,81,0	1/1:8,26:34:90.31:1938,90,0	1/1:3,23:26:78.27:1707,78,0	1/1:4,21:25:75.24:1601,75,0	1/1:2,18:20:57.20:1287,57,0	1/1:2,7:9:27.09:599,27,0	1/1:4,3:7:15.05:297,15,0	1/1:4,12:16:45.15:987,45,0	1/1:3,20:23:63.22:1395,63,0	1/1:3,4:7:15.05:323,15,0	1/1:6,20:26:72.24:1522,72,0	1/1:6,23:29:78.27:1718,78,0	1/1:5,6:11:27.09:584,27,0	1/1:9,23:33:90.31:1921,90,0	1/1:5,16:21:63.19:1321,63,0	1/1:7,25:31:93.30:1957,93,0	1/1:0,8:8:24:447,24,0
chr10	27318655	.	G	GC	23177.18	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-1.982;DP=628;FS=0.607;HRun=1;HaplotypeScore=119.1465;InbreedingCoeff=0.9951;MQ=79.74;MQ0=0;MQRankSum=-9.682;QD=39.48;ReadPosRankSum=3.342;VQSLOD=4.5610;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,15:16:22.62:521,23,0	1/1:0,11:11:29.84:448,30,0	0/0:20,0:21:56.39:0,56,694	0/0:20,0:20:57.18:0,57,735	1/1:3,32:35:75.25:1120,75,0	1/1:2,20:22:63.20:915,63,0	1/1:2,19:21:54.18:809,54,0	1/1:5,30:35:93.20:1297,93,0	1/1:2,19:21:57.18:834,57,0	1/1:2,24:26:72.24:1068,72,0	1/1:0,28:28:78.26:1156,78,0	1/1:1,28:29:87.29:1301,87,0	1/1:2,32:34:96.33:1435,96,0	1/1:1,21:22:63.21:943,63,0	1/1:1,17:18:48.12:692,48,0	1/1:3,20:23:63.16:899,63,0	1/1:2,11:13:36.08:513,36,0	1/1:0,7:7:21.07:314,21,0	1/1:2,19:21:60.19:867,60,0	1/1:2,27:29:72.19:1029,72,0	1/1:1,11:12:30.10:448,30,0	1/1:1,24:25:72.23:1049,72,0	1/1:1,25:26:65.87:981,66,0	1/1:0,11:11:27.04:379,27,0	1/1:2,28:30:80.88:1209,81,0	1/1:1,25:26:78.25:1135,78,0	1/1:2,32:33:93.30:1365,93,0	1/1:1,11:12:30.10:449,30,0
chr10	27319916	.	GTATATGTATATATATATACA	G	2312.50	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=6.719;DP=425;FS=0.000;HRun=0;HaplotypeScore=194.0321;InbreedingCoeff=0.8059;MQ=63.20;MQ0=3;MQRankSum=-6.602;QD=50.27;ReadPosRankSum=2.665;VQSLOD=2.6826;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:63.22:0,63,4773	1/1:0,7:7:3.01:168,3,0	0/0:7,0:5:6.02:0,6,98	0/0:7,0:5:0.47:0,0,1	0/0:19,0:19:45.15:0,45,3511	0/0:24,0:24:67.47:0,67,5342	0/0:4,0:4:6.02:0,6,377	0/0:46,0:46:99:0,126,7439	0/0:9,0:9:24.08:0,24,1436	0/0:27,0:27:69.23:0,69,5037	0/0:16,0:16:48.14:0,48,3019	0/0:11,0:11:27.09:0,27,1564	0/0:16,0:16:45.15:0,45,3128	0/0:10,0:10:24.08:0,24,1760	1/1:0,18:18:33.11:1657,33,0	0/0:11,0:11:33.11:0,33,2553	1/1:2,19:21:12.04:614,12,0	0/0:11,0:10:30.10:0,30,2537	0/0:16,0:15:42.14:0,42,3203	0/0:16,0:16:42.14:0,42,2709	0/0:6,0:6:18.06:0,18,1274	0/0:6,0:6:18.06:0,18,1045	0/0:9,0:9:27.09:0,27,1812	0/0:8,0:8:21.07:0,21,1384	0/0:18,0:18:51.18:0,51,3864	0/0:23,0:23:63.22:0,63,4811	0/0:15,0:15:42.14:0,42,3308	0/0:23,0:23:57.19:0,57,3808
chr10	27320126	.	GACACACAC	G	1238.03	PASS	AB=0.849;AC=20;AF=0.417;AN=48;BaseQRankSum=1.885;DP=474;FS=3.296;HRun=0;HaplotypeScore=133.6739;InbreedingCoeff=0.3693;MQ=69.60;MQ0=11;MQRankSum=-3.303;QD=6.16;ReadPosRankSum=1.690;VQSLOD=2.6029;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:28,1:28:30.27:78,0,30	./.	./.	0/0:45,0:30:1.25:0,1,3	1/1:10,1:11:6.02:140,6,0	1/1:12,0:18:1.25:3,1,0	0/0:21,0:22:10.05:0,10,249	0/0:23,0:22:1.82:0,2,5	1/1:6,9:16:12.04:276,12,0	1/1:8,7:15:1.43:71,1,0	1/1:9,0:8:6.01:72,6,0	0/0:8,0:9:12.04:0,12,212	0/0:15,0:14:15.05:0,15,347	0/0:17,0:17:12.93:0,13,355	0/0:19,0:18:5.56:0,6,191	1/1:3,8:11:6.02:146,6,0	0/0:16,0:15:19.62:0,20,382	0/1:17,1:18:17.56:127,0,18	0/0:11,0:10:1.25:0,1,3	1/1:15,8:23:16.66:246,17,0	1/1:18,0:18:3:26,3,0	0/0:13,0:15:12.03:0,12,329	0/0:11,0:11:3.01:0,3,98	0/0:21,0:26:36.10:0,36,1049	0/1:11,5:16:11.48:68,0,11	./.	0/1:11,5:16:11.31:136,0,11	./.
chr10	27320964	.	G	GAAAAAAAA	14432.57	PASS	AB=0.765;AC=48;AF=0.857;AN=56;BaseQRankSum=-2.252;DP=548;FS=1.473;HRun=11;HaplotypeScore=160.0923;InbreedingCoeff=0.6579;MQ=50.37;MQ0=2;MQRankSum=-7.620;QD=27.86;ReadPosRankSum=-5.769;VQSLOD=0.2804;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:37:28.35:990,28,0	0/0:2,0:6:6.09:0,6,17	0/0:12,0:4:11.94:0,12,133	0/0:10,0:6:4.21:0,4,39	1/1:19,0:24:40.39:522,40,0	1/1:15,0:15:29.99:654,30,0	1/1:15,7:22:39.13:1363,39,0	1/1:24,0:23:36.10:884,36,0	1/1:12,0:22:21.07:410,21,0	1/1:12,0:22:47.79:715,48,0	1/1:10,0:20:34.83:493,35,0	1/1:13,6:21:24.08:919,24,0	1/1:7,1:18:12.04:357,12,0	1/1:10,5:18:18.06:595,18,0	0/1:25,0:25:1.60:2,0,22	1/1:6,0:17:23.97:553,24,0	0/1:3,0:26:35.10:50,0,35	1/1:11,0:14:23.96:332,24,0	1/1:20,0:24:56.63:820,57,0	1/1:10,0:23:30.03:530,30,0	1/1:9,0:12:18.06:317,18,0	1/1:7,0:17:24.04:677,24,0	1/1:9,2:22:24.29:557,24,0	1/1:6,6:12:9.73:234,10,0	1/1:17,0:27:45.15:987,45,0	1/1:8,0:15:32.57:543,33,0	1/1:9,0:20:27.56:634,28,0	1/1:4,0:9:15.05:293,15,0
chr10	27322886	.	G	GA	10343.46	PASS	AB=0.632;AC=45;AF=0.804;AN=56;BaseQRankSum=-9.837;DP=484;FS=0.582;HRun=9;HaplotypeScore=56.3361;InbreedingCoeff=0.8266;MQ=67.16;MQ0=5;MQRankSum=-0.746;QD=24.80;ReadPosRankSum=2.219;VQSLOD=5.5966;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,21:28:53.98:579,54,0	0/0:3,0:2:6:0,6,52	0/0:16,0:11:13.85:0,14,194	0/0:10,0:8:6.92:0,7,78	1/1:3,19:23:47.96:510,48,0	1/1:3,24:27:66.18:728,66,0	1/1:2,7:8:18.05:199,18,0	1/1:2,20:21:53.81:572,54,0	1/1:1,13:14:30.08:332,30,0	1/1:0,14:14:37.71:425,38,0	1/1:4,21:25:57.15:627,57,0	1/1:2,11:13:39.08:414,39,0	1/1:4,10:14:1.02:239,1,0	1/1:0,17:17:45.12:498,45,0	0/0:15,0:15:32.99:0,33,285	1/1:1,9:10:27.07:299,27,0	0/0:22,0:22:63.87:0,64,549	1/1:2,21:23:58.73:661,59,0	0/1:5,6:10:1.95:189,0,2	1/1:5,17:22:48.06:502,48,0	1/1:2,10:12:27.07:299,27,0	1/1:4,11:16:38.77:393,39,0	1/1:3,20:23:48.11:522,48,0	1/1:1,7:8:18.05:199,18,0	1/1:2,22:25:39.09:432,39,0	1/1:1,18:19:48.13:531,48,0	1/1:1,21:22:54.15:597,54,0	1/1:0,19:19:54.15:597,54,0
chr10	27322914	.	GA	G	774.40	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-1.131;DP=509;FS=0.000;HRun=7;HaplotypeScore=85.8930;InbreedingCoeff=0.8849;MQ=71.59;MQ0=1;MQRankSum=-1.060;QD=25.81;ReadPosRankSum=2.705;VQSLOD=4.1068;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:68.52:0,69,832	1/1:0,1:1:3.01:31,3,0	0/0:16,0:12:23.74:0,24,251	0/0:19,1:17:13.42:0,13,288	0/0:21,0:21:60.18:0,60,739	0/0:27,0:27:63.19:0,63,779	0/0:6,0:6:18.06:0,18,226	0/0:29,0:29:72.22:0,72,892	0/0:12,0:12:36.12:0,36,453	0/0:12,0:12:36.12:0,36,452	0/0:24,0:24:69.22:0,69,864	0/0:19,0:19:57.17:0,57,704	0/0:14,0:14:33.11:0,33,415	0/0:15,0:15:36.10:0,36,439	0/0:12,0:12:33.11:0,33,415	0/0:13,0:13:33.11:0,33,415	1/1:2,27:29:84.18:853,84,0	0/0:26,0:26:69.20:0,69,851	0/0:24,0:24:69.18:0,69,830	0/0:15,0:15:39.12:0,39,491	0/0:15,0:15:42.12:0,42,515	0/0:13,0:13:36.11:0,36,452	0/0:23,0:23:60.19:0,60,753	0/0:10,0:10:27.09:0,27,339	0/0:22,0:22:51.16:0,51,631	0/0:22,0:22:57.18:0,57,717	0/0:22,0:22:60.19:0,60,754	0/0:20,0:20:54.17:0,54,679
chr10	27324114	.	TA	T	12641.58	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-6.929;DP=580;FS=0.610;HRun=8;HaplotypeScore=62.0006;InbreedingCoeff=0.9738;MQ=76.15;MQ0=1;MQRankSum=-3.143;QD=24.36;ReadPosRankSum=3.127;VQSLOD=5.6220;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,8:8:15.02:145,15,0	0/0:13,0:13:32.70:0,33,226	0/0:18,0:17:30.07:0,30,341	0/0:11,0:10:8.48:0,8,100	1/1:6,32:38:90.14:869,90,0	1/1:1,23:24:66.11:637,66,0	1/1:1,13:14:33.05:319,33,0	1/1:4,32:36:96.11:918,96,0	1/1:0,16:16:45.07:435,45,0	1/1:6,24:30:72.09:688,72,0	1/1:5,23:28:69.10:665,69,0	1/1:2,19:21:54.09:522,54,0	1/1:1,21:22:57.09:551,57,0	1/1:0,11:11:30.05:290,30,0	1/1:3,17:20:51.08:493,51,0	1/1:0,19:19:54.09:522,54,0	0/0:19,0:19:47.63:0,48,342	1/1:2,16:18:42.07:405,42,0	1/1:1,21:22:63.10:608,63,0	1/1:4,23:27:69.10:665,69,0	1/1:1,9:10:24.04:232,24,0	1/1:2,21:23:54.08:522,54,0	1/1:2,25:27:75.12:724,75,0	1/1:3,8:11:18.02:174,18,0	1/1:1,30:31:84.13:811,84,0	1/1:4,15:19:45.07:435,45,0	1/1:2,30:31:72.11:695,72,0	1/1:1,11:12:33.05:319,33,0
chr10	27326017	.	T	TA	864.09	PASS	AB=1.000;AC=6;AF=0.107;AN=56;BaseQRankSum=-2.970;DP=259;FS=25.908;HRun=7;HaplotypeScore=26.4141;InbreedingCoeff=0.5527;MQ=65.13;MQ0=5;MQRankSum=0.502;QD=20.57;ReadPosRankSum=-1.873;VQSLOD=1.3364;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:42.04:0,42,400	1/1:0,5:5:15.04:178,15,0	0/1:9,0:7:0.79:1,0,54	0/1:3,0:2:13.29:13,0,23	0/0:14,0:13:39.06:0,39,377	0/0:7,0:7:18.03:0,18,174	0/0:3,0:3:8.95:0,9,76	0/0:13,0:13:33.04:0,33,318	0/0:8,0:8:18.02:0,18,174	0/0:11,0:11:30.05:0,30,290	0/0:7,0:7:18.02:0,18,174	0/0:6,0:6:18.03:0,18,174	0/0:7,0:7:21.03:0,21,203	0/0:4,0:4:12.02:0,12,116	0/0:8,0:7:18.03:0,18,174	0/0:6,0:6:15.02:0,15,145	1/1:2,23:25:66.20:797,66,0	0/0:9,0:8:24.04:0,24,232	0/0:11,0:9:27.04:0,27,261	0/0:14,0:14:39.06:0,39,377	0/0:6,0:6:18.03:0,18,174	0/0:3,0:2:6.01:0,6,58	0/0:3,0:3:6.01:0,6,58	0/0:2,0:2:3:0,3,29	0/0:20,0:19:57.09:0,57,550	0/0:17,0:16:45.07:0,45,434	0/0:10,0:9:30.03:0,30,284	0/0:9,0:8:21.03:0,21,203
chr10	27326237	.	AATGGTGGGACCC	A	1597.75	PASS	AB=0.560;AC=1;AF=0.019;AN=54;BaseQRankSum=6.241;DP=570;FS=5.074;HRun=0;HaplotypeScore=185.0892;InbreedingCoeff=-0.0192;MQ=56.66;MQ0=1;MQRankSum=-6.560;QD=57.06;ReadPosRankSum=0.670;VQSLOD=3.1511;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,151,8418	./.	0/0:24,0:13:33.11:0,33,1654	0/0:34,0:22:57.20:0,57,2799	0/0:17,0:17:39.13:0,39,2244	0/0:20,0:20:54.19:0,54,3118	0/0:21,0:21:63.22:0,63,3688	0/0:24,0:24:66.23:0,66,3881	0/0:18,0:18:48.16:0,48,2914	0/0:17,0:17:51.18:0,51,2960	0/0:11,0:11:30.10:0,30,1586	0/0:14,0:14:42.13:0,42,2415	0/0:17,0:17:45.15:0,45,2475	0/0:13,0:13:36.12:0,36,2134	0/0:23,0:23:69.22:0,69,3938	0/0:10,0:10:30.10:0,30,1771	0/1:6,22:28:53.77:1672,0,54	0/0:27,0:27:78.27:0,78,4501	0/0:17,0:17:48.16:0,48,2677	0/0:11,0:11:33.09:0,33,1664	0/0:39,0:39:99:0,108,6576	0/0:14,0:14:42.14:0,42,2393	0/0:13,0:13:36.12:0,36,1891	0/0:34,0:34:96.33:0,96,5472	0/0:12,0:12:36.12:0,36,2083	0/0:19,0:19:51.18:0,51,3025	0/0:33,0:33:96.33:0,96,5214	0/0:6,0:6:18.06:0,18,1036
chr10	27326567	.	A	AAAAC	498.81	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=-3.255;DP=570;FS=22.118;HRun=0;HaplotypeScore=92.3214;InbreedingCoeff=0.7156;MQ=68.68;MQ0=0;MQRankSum=0.072;QD=14.25;ReadPosRankSum=-0.647;VQSLOD=1.5297;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:73.68:0,74,1197	0/0:8,0:8:18.06:0,18,300	0/0:15,0:15:18.05:0,18,255	0/0:10,0:10:18.06:0,18,288	0/0:32,0:32:63.22:0,63,1050	0/0:20,0:20:48.16:0,48,800	0/0:18,0:18:42.13:0,42,668	0/0:29,0:29:65.02:0,65,1022	0/0:14,0:14:39.13:0,39,650	0/0:32,0:32:72.24:0,72,1178	0/0:25,0:25:60.18:0,60,944	0/0:17,0:17:36.11:0,36,575	0/0:14,0:14:39.13:0,39,648	0/0:12,0:12:33.11:0,33,550	1/1:3,10:13:24.08:592,24,0	0/0:16,0:16:33.11:0,33,550	0/0:19,0:19:42.13:0,42,674	0/0:29,0:29:75.26:0,75,1250	0/0:26,0:26:45.15:0,45,749	0/0:28,0:28:51.17:0,51,841	0/0:19,0:19:45.10:0,45,665	0/0:13,0:13:36.10:0,36,553	0/0:22,0:22:51.17:0,51,850	0/0:16,0:16:45.15:0,45,750	0/0:24,0:24:57.19:0,57,944	0/0:23,0:23:51.17:0,51,828	0/0:22,0:22:42.14:0,42,700	0/1:22,0:22:3.41:3,0,558
chr10	27327566	.	GTT	G	17647.55	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-6.480;DP=626;FS=0.000;HRun=9;HaplotypeScore=84.3321;InbreedingCoeff=0.9782;MQ=70.94;MQ0=2;MQRankSum=-8.126;QD=29.66;ReadPosRankSum=5.815;VQSLOD=4.9187;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,27:27:78.23:909,78,0	1/1:2,9:11:24.07:280,24,0	0/0:18,0:18:50.53:0,51,683	0/0:12,0:12:23.22:0,23,295	1/1:3,37:40:99:1224,105,0	1/1:3,22:25:66.19:769,66,0	1/1:1,10:11:12.51:265,13,0	1/1:5,25:30:75.21:873,75,0	1/1:1,14:15:39.11:454,39,0	1/1:4,35:39:99:1221,105,0	1/1:3,28:31:81.23:942,81,0	1/1:0,14:14:27.08:315,27,0	1/1:2,24:26:69.20:804,69,0	1/1:3,22:25:54.15:629,54,0	1/1:1,21:22:63.19:734,63,0	1/1:1,15:16:42.12:489,42,0	1/1:2,28:30:41.88:806,42,0	1/1:1,25:26:63.18:734,63,0	1/1:2,14:16:42.12:489,42,0	1/1:1,30:31:87.24:1007,87,0	1/1:2,8:10:18.05:210,18,0	1/1:3,23:26:63.18:734,63,0	1/1:0,27:27:66.19:767,66,0	1/1:1,11:11:27.08:315,27,0	1/1:1,17:18:51.15:594,51,0	1/1:0,26:26:78.22:897,78,0	1/1:4,25:29:72.21:837,72,0	1/1:1,10:11:30.08:350,30,0
chr10	27328083	.	C	CATATATATAT	10554.65	PASS	AB=0.897;AC=41;AF=0.820;AN=50;BaseQRankSum=-3.620;DP=342;FS=0.000;HRun=0;HaplotypeScore=110.8276;InbreedingCoeff=0.3797;MQ=62.25;MQ0=4;MQRankSum=-1.488;QD=38.10;ReadPosRankSum=2.651;VQSLOD=3.8845;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,4:14:5.52:172,6,0	./.	0/0:15,0:9:6:0,6,107	0/0:13,0:5:6.02:0,6,152	0/0:9,2:14:0.28:0,0,1	1/1:9,6:16:2.09:152,2,0	1/1:7,0:7:11.93:140,12,0	1/1:33,0:32:72.25:2068,72,0	0/1:5,0:9:8.94:135,0,9	1/1:6,6:12:30:1055,30,0	./.	1/1:9,0:10:3.01:83,3,0	1/1:7,5:11:6.02:235,6,0	1/1:7,0:8:1.56:139,2,0	1/1:9,0:21:5.52:247,6,0	1/1:9,0:9:9.03:314,9,0	1/1:10,0:10:15.04:370,15,0	1/1:5,0:5:12.04:451,12,0	1/1:14,0:13:33.11:1219,33,0	1/1:11,0:11:6.02:283,6,0	./.	1/1:7,0:7:3.01:72,3,0	0/1:10,0:10:0:0,0,0	0/1:4,0:4:0:0,0,0	1/1:6,10:18:12.04:577,12,0	1/1:11,8:22:51.17:1881,51,0	1/1:20,0:20:15.52:695,16,0	1/1:5,0:5:9.03:267,9,0
chr10	27328092	.	A	ATATATATATATG	11418.27	PASS	AB=0.908;AC=38;AF=0.731;AN=52;BaseQRankSum=-3.909;DP=364;FS=2.074;HRun=0;HaplotypeScore=126.5296;InbreedingCoeff=0.0926;MQ=52.35;MQ0=11;MQRankSum=-1.975;QD=35.91;ReadPosRankSum=5.066;VQSLOD=4.3764;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:16:7.72:141,8,0	0/0:5,0:5:2.98:0,3,21	0/0:12,0:5:6.01:0,6,107	0/0:14,0:4:6.02:0,6,152	1/1:14,0:14:2.12:23,2,0	0/1:18,0:17:39.10:151,0,39	0/1:8,0:8:6.66:166,0,7	1/1:32,0:29:60.35:2106,60,0	0/1:10,0:10:16.16:184,0,16	1/1:14,0:14:16.53:1063,17,0	./.	1/1:2,7:11:3.01:83,3,0	0/1:12,0:11:16.61:214,0,17	0/1:12,1:13:13.24:264,0,13	1/1:15,0:19:6.99:339,7,0	1/1:10,0:11:14.06:390,14,0	0/1:11,0:11:35.46:351,0,35	1/1:4,0:6:12.04:407,12,0	1/1:4,7:14:36.12:1412,36,0	1/1:2,5:15:6.02:373,6,0	./.	1/1:6,0:6:2.98:72,3,0	0/1:3,4:9:0:0,0,0	0/1:4,2:6:17.03:17,0,17	1/1:15,1:17:15.04:536,15,0	1/1:24,0:24:58.06:2013,58,0	1/1:3,9:23:14.71:865,15,0	1/1:5,0:5:9.03:247,9,0
chr10	27329543	.	CT	C	9237.15	PASS	AB=0.674;AC=51;AF=0.911;AN=56;BaseQRankSum=-2.667;DP=480;FS=7.033;HRun=10;HaplotypeScore=59.3145;InbreedingCoeff=0.3767;MQ=65.11;MQ0=1;MQRankSum=-2.394;QD=19.78;ReadPosRankSum=3.799;VQSLOD=5.7766;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,30:33:83.98:729,84,0	1/1:1,8:9:23.99:208,24,0	0/1:14,1:8:40.78:42,0,41	0/0:12,0:9:16.29:0,16,166	1/1:4,23:27:59.80:521,60,0	0/1:2,13:15:0.19:227,0,0	1/1:3,11:14:32.98:287,33,0	1/1:4,12:16:32.96:282,33,0	1/1:2,16:18:47.99:416,48,0	1/1:4,20:24:29.78:484,30,0	1/1:4,13:17:38.97:339,39,0	1/1:1,14:15:35.99:313,36,0	1/1:1,15:16:38.99:339,39,0	1/1:1,18:19:53.99:469,54,0	1/1:3,16:19:56.99:494,57,0	1/1:2,18:20:53.98:469,54,0	1/1:3,12:15:26.99:234,27,0	1/1:0,7:7:15:130,15,0	1/1:3,17:20:47.96:413,48,0	1/1:7,16:23:52.90:439,53,0	1/1:2,5:7:14.99:130,15,0	1/1:2,13:15:32.67:286,33,0	0/1:2,9:11:6.28:112,0,6	1/1:2,10:12:26.98:234,27,0	1/1:3,25:28:65.95:573,66,0	1/1:3,21:24:62.98:546,63,0	1/1:3,18:21:53.99:469,54,0	1/1:2,5:7:6:52,6,0
chr10	27329615	.	TA	T	333.68	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.601;DP=544;FS=0.000;HRun=7;HaplotypeScore=60.3517;InbreedingCoeff=0.9608;MQ=67.12;MQ0=0;MQRankSum=-1.018;QD=20.86;ReadPosRankSum=0.888;VQSLOD=3.0010;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,120,1510	0/0:10,0:10:30.10:0,30,377	0/0:12,0:12:24.07:0,24,292	0/0:7,0:7:11.89:0,12,116	0/0:33,0:33:96.31:0,96,1207	0/0:23,0:23:60.19:0,60,755	0/0:11,0:11:33.11:0,33,415	0/0:20,0:19:51.12:0,51,604	0/0:15,0:15:36.07:0,36,435	0/0:29,0:29:78.25:0,78,981	0/0:29,0:29:87.24:0,87,1057	0/0:10,0:10:21.07:0,21,264	0/0:19,0:19:45.14:0,45,566	0/0:16,0:16:45.14:0,45,555	1/1:2,14:16:42.10:429,42,0	0/0:26,0:26:75.24:0,75,944	0/0:25,0:25:69.22:0,69,868	0/0:15,0:15:36.12:0,36,453	0/0:20,0:20:54.16:0,54,666	0/0:22,0:22:66.21:0,66,830	0/0:11,0:11:33.11:0,33,415	0/0:11,0:11:30.10:0,30,377	0/0:22,0:22:57.03:0,57,695	0/0:10,0:10:27.08:0,27,328	0/0:24,0:24:63.20:0,63,792	0/0:21,0:21:60.19:0,60,755	0/0:31,0:30:84.25:0,84,1043	0/0:14,0:14:33.11:0,33,415
chr10	27330837	.	GTT	G	13919.06	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-2.795;DP=576;FS=3.858;HRun=11;HaplotypeScore=136.1923;InbreedingCoeff=0.9841;MQ=77.34;MQ0=4;MQRankSum=-3.658;QD=26.11;ReadPosRankSum=5.410;VQSLOD=3.8171;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,21:24:34.51:523,35,0	1/1:2,11:13:33.08:351,33,0	0/0:21,0:21:25.50:0,25,431	0/0:18,0:16:18.54:0,19,261	1/1:1,10:11:30.07:319,30,0	1/1:1,29:30:72.18:766,72,0	1/1:1,14:15:39.09:415,39,0	1/1:5,36:41:99:1107,105,0	1/1:3,25:27:57.14:607,57,0	1/1:8,17:25:53.30:549,53,0	1/1:0,18:18:54.14:575,54,0	1/1:1,19:20:54.13:575,54,0	1/1:3,17:20:48.10:511,48,0	1/1:1,20:21:57.14:605,57,0	1/1:3,20:23:57.14:607,57,0	1/1:3,22:25:57.14:607,57,0	1/1:2,16:18:45.11:479,45,0	1/1:1,4:6:14.77:140,15,0	1/1:2,19:22:56.92:605,57,0	1/1:2,22:24:63.09:658,63,0	1/1:1,16:17:45.11:479,45,0	1/1:1,10:11:24.04:255,24,0	1/1:3,19:22:44.86:505,45,0	1/1:0,13:13:33.08:351,33,0	1/1:1,20:21:54.13:574,54,0	1/1:2,23:25:69.17:734,69,0	1/1:5,26:30:72.14:766,72,0	1/1:0,8:8:24.06:255,24,0
chr10	27332052	.	AG	A	17172.59	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=4.020;DP=561;FS=0.000;HRun=2;HaplotypeScore=57.0354;InbreedingCoeff=0.9978;MQ=89.70;MQ0=0;MQRankSum=-9.106;QD=35.33;ReadPosRankSum=5.697;VQSLOD=4.6925;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,14:14:39.13:506,39,0	0/0:7,0:7:21.07:0,21,315	0/0:32,1:33:56.94:0,57,1249	0/0:17,0:17:51.17:0,51,729	1/1:2,28:30:81.20:1030,81,0	1/1:0,25:25:69.22:896,69,0	1/1:0,13:13:30.10:390,30,0	1/1:0,36:36:99:1335,105,0	1/1:1,15:16:42.14:545,42,0	1/1:1,21:22:66.21:851,66,0	1/1:0,24:24:63.14:797,63,0	1/1:0,17:17:51.17:662,51,0	1/1:2,17:19:48.16:623,48,0	1/1:0,19:19:57.19:740,57,0	1/1:0,24:24:69.22:896,69,0	1/1:0,17:17:45.15:584,45,0	0/0:18,0:18:54.17:0,54,788	1/1:0,13:13:30.10:389,30,0	1/1:0,18:18:54.16:687,54,0	1/1:0,28:28:84.24:1072,84,0	1/1:0,14:14:39.13:506,39,0	1/1:0,21:21:60.13:758,60,0	1/1:0,27:27:66.21:857,66,0	1/1:1,12:13:27.09:351,27,0	1/1:0,18:18:51.17:662,51,0	1/1:1,24:25:72.19:904,72,0	1/1:0,22:22:63.20:818,63,0	1/1:2,9:11:25.02:314,25,0
chr10	27332757	.	TTAGATAGATAGA	T	10318.20	PASS	AB=0.773;AC=43;AF=0.935;AN=46;BaseQRankSum=2.420;DP=549;FS=4.048;HRun=0;HaplotypeScore=205.6652;InbreedingCoeff=0.2116;MQ=72.87;MQ0=6;MQRankSum=-2.670;QD=22.05;ReadPosRankSum=0.739;VQSLOD=4.0993;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	1/1:4,5:9:12.04:408,12,0	./.	0/1:18,0:13:0:0,0,0	1/1:19,11:30:20.94:577,21,0	1/1:16,12:28:27.09:918,27,0	./.	./.	1/1:14,8:21:21.07:714,21,0	1/1:20,11:31:36.11:1148,36,0	0/1:7,0:20:4.30:4,0,107	1/1:10,9:19:18.06:612,18,0	1/1:10,10:20:21.07:714,21,0	1/1:11,7:18:12.04:408,12,0	1/1:16,0:25:11.15:28,11,0	1/1:10,11:21:21.07:714,21,0	1/1:9,1:10:3.01:102,3,0	1/1:4,1:5:3.01:102,3,0	1/1:13,4:15:12.04:309,12,0	1/1:27,11:38:24.04:734,24,0	./.	1/1:14,10:24:24.08:720,24,0	1/1:16,7:23:18.06:595,18,0	1/1:8,4:12:3.01:102,3,0	1/1:12,8:20:12.04:408,12,0	1/1:11,10:21:30.10:892,30,0	0/1:18,0:30:8:8,0,88	1/1:7,0:7:6.02:98,6,0
chr10	27333962	.	T	TA	389.75	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-5.407;DP=515;FS=1.046;HRun=8;HaplotypeScore=50.3748;InbreedingCoeff=0.9680;MQ=80.93;MQ0=0;MQRankSum=-0.724;QD=25.98;ReadPosRankSum=1.289;VQSLOD=4.3103;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:50.82:0,51,452	0/0:6,0:6:18.01:0,18,165	0/0:16,0:16:25.55:0,26,220	0/0:11,0:11:14.98:0,15,137	0/0:38,0:38:99:0,105,961	0/0:26,0:26:69.03:0,69,628	0/0:8,0:8:23.99:0,24,214	0/0:39,0:39:99:0,102,930	0/0:12,0:12:30.01:0,30,275	0/0:23,0:23:63.02:0,63,574	0/0:19,0:19:51.02:0,51,467	0/0:11,0:11:33.02:0,33,302	0/0:12,0:12:33.02:0,33,302	0/0:20,0:20:40.19:0,40,502	1/1:0,15:15:42.12:485,42,0	0/0:23,0:23:69.02:0,69,624	0/0:14,0:14:38.92:0,39,341	0/0:13,0:13:26.92:0,27,247	0/0:19,0:20:41.03:0,41,357	0/0:36,0:37:99:0,101,908	0/0:11,0:11:30:0,30,269	0/0:17,0:18:47.06:0,47,418	0/0:24,0:24:63:0,63,567	0/0:13,0:13:29.99:0,30,268	0/0:17,0:17:51.03:0,51,467	0/0:18,0:18:54:0,54,485	0/0:25,0:25:72.04:0,72,659	0/0:8,0:8:24.01:0,24,220
chr10	27335294	.	CACACACACACACACACAT	C	5770.99	PASS	AB=0.993;AC=40;AF=0.714;AN=56;BaseQRankSum=-1.259;DP=537;FS=23.838;HRun=0;HaplotypeScore=195.5443;InbreedingCoeff=0.2002;MQ=50.83;MQ0=28;MQRankSum=1.919;QD=12.44;ReadPosRankSum=1.275;VQSLOD=1.8659;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:16:21.44:197,21,0	0/1:6,0:6:33.88:34,0,335	0/0:9,0:3:9.01:0,9,85	0/0:20,0:10:29.83:0,30,260	1/1:11,0:11:17.49:195,17,0	0/1:21,0:21:60.56:153,0,61	1/1:17,0:15:2.75:104,3,0	1/1:20,0:19:31.77:302,32,0	1/1:16,1:16:33.10:386,33,0	1/1:19,0:19:21.04:267,21,0	1/1:9,13:21:3.01:151,3,0	0/1:15,1:16:32.25:233,0,32	1/1:17,0:17:9.18:178,9,0	0/1:24,0:24:99:233,0,166	0/0:21,0:20:12.04:0,12,850	1/1:9,23:32:11.96:588,12,0	0/0:23,0:22:16.30:0,16,429	0/1:19,0:14:99:102,0,159	1/1:10,0:10:12.04:186,12,0	1/1:22,0:22:29.95:268,30,0	0/1:33,0:29:81.74:175,0,82	1/1:19,0:19:20.47:157,20,0	1/1:11,0:11:20.69:242,21,0	0/1:27,0:26:99:287,0,139	1/1:24,2:26:48.03:744,48,0	1/1:26,0:25:42.51:360,43,0	1/1:6,14:19:2.60:151,3,0	0/1:10,0:9:42.86:78,0,43
chr10	27335296	.	CACACACACACACACAT	C	6352.96	PASS	AB=0.857;AC=42;AF=0.750;AN=56;BaseQRankSum=-2.210;DP=540;FS=12.566;HRun=0;HaplotypeScore=181.9558;InbreedingCoeff=0.3675;MQ=51.39;MQ0=28;MQRankSum=-0.400;QD=13.72;ReadPosRankSum=1.554;VQSLOD=3.2736;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:19:30.34:238,30,0	0/1:7,0:7:54.84:55,0,254	0/0:11,0:4:12.02:0,12,120	0/0:21,0:11:32.84:0,33,293	1/1:10,0:10:18.47:207,18,0	1/1:22,0:22:37.27:341,37,0	1/1:17,0:15:8.41:136,8,0	1/1:21,0:20:42.02:363,42,0	1/1:17,0:16:32.86:353,33,0	1/1:21,0:21:32.84:289,33,0	1/1:21,0:20:3.01:119,3,0	0/1:6,10:16:4.21:248,0,4	1/1:17,0:17:29.31:215,29,0	0/1:8,17:25:99:311,0,126	0/0:22,0:21:12.04:0,12,751	1/1:30,0:30:12.04:477,12,0	0/0:23,0:22:15.92:0,16,276	0/1:18,0:13:99:102,0,116	1/1:11,0:11:15.04:213,15,0	1/1:23,0:23:35.93:294,36,0	1/1:31,0:27:32.79:254,33,0	1/1:19,0:19:20.99:200,21,0	1/1:10,1:11:24:335,24,0	0/1:24,2:25:99:421,0,107	1/1:25,0:25:48.01:641,48,0	1/1:24,0:23:47.57:389,48,0	1/1:19,0:18:2.60:118,3,0	0/1:10,0:9:35.09:35,0,46
chr10	27335299	.	A	ACT	132.45	PASS	AB=0.899;AC=8;AF=0.143;AN=56;BaseQRankSum=3.163;DP=508;FS=38.427;HRun=0;HaplotypeScore=119.2943;InbreedingCoeff=0.1083;MQ=52.38;MQ0=28;MQRankSum=-3.467;QD=1.03;ReadPosRankSum=-0.287;VQSLOD=0.6972;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:19:26.66:0,27,216	0/0:7,0:7:17.94:0,18,144	0/0:14,0:7:15.04:0,15,171	0/0:23,0:14:41.68:0,42,402	0/0:9,0:9:17.96:0,18,144	0/0:23,0:23:44.88:0,45,364	0/0:15,0:13:8.90:0,9,152	0/0:17,0:16:44.70:0,45,358	0/0:17,0:16:18.11:0,18,234	0/1:15,0:15:6.86:7,0,238	0/0:17,0:16:5.39:0,5,28	0/1:16,0:16:4.03:4,0,54	0/0:16,0:16:4.22:0,4,203	0/1:23,0:23:8.07:8,0,43	0/1:3,19:21:6.59:157,0,7	0/1:29,0:29:14.69:15,0,37	0/0:25,0:24:16.77:0,17,129	0/0:17,0:12:25.11:0,25,183	0/0:12,0:12:29.95:0,30,255	0/0:17,0:17:41.91:0,42,340	0/0:29,0:25:38.87:0,39,310	0/0:17,0:17:23.96:0,24,197	0/0:12,0:12:26.54:0,27,212	0/0:23,0:22:20.61:0,21,274	0/0:27,0:27:29.35:0,29,432	0/0:21,0:20:50.83:0,51,426	1/1:17,0:16:5.35:30,5,0	0/1:5,0:5:35.79:36,0,37
chr10	27335304	.	CACACACAT	C	6071.31	PASS	AB=1.000;AC=48;AF=0.857;AN=56;BaseQRankSum=-0.611;DP=455;FS=2.574;HRun=0;HaplotypeScore=105.6375;InbreedingCoeff=0.4680;MQ=56.56;MQ0=27;MQRankSum=-2.821;QD=15.57;ReadPosRankSum=2.317;VQSLOD=3.8357;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:18:32.87:261,33,0	1/1:7,0:7:14.97:122,15,0	0/0:19,0:10:1.10:0,1,226	0/0:23,0:14:34.99:0,35,344	1/1:11,0:11:29.94:243,30,0	1/1:19,0:19:44.86:360,45,0	1/1:12,0:10:11.10:162,11,0	1/1:19,0:18:47.85:393,48,0	1/1:16,0:15:32.94:298,33,0	1/1:13,0:13:35.95:313,36,0	1/1:14,0:13:3.01:63,3,0	1/1:11,0:12:3.01:122,3,0	1/1:12,0:12:32.51:239,33,0	0/1:18,0:18:37.01:116,0,37	0/0:23,0:22:15.04:0,15,398	1/1:24,0:24:12.04:253,12,0	1/1:4,18:21:6.02:164,6,0	1/1:16,0:11:16.17:152,16,0	1/1:12,0:12:21.47:263,21,0	1/1:18,0:18:47.90:389,48,0	1/1:19,0:15:32.82:257,33,0	1/1:13,0:13:29.96:247,30,0	1/1:10,0:10:26.90:260,27,0	0/1:22,0:21:47.53:294,0,48	1/1:24,0:24:62.96:576,63,0	1/1:18,0:17:50.74:416,51,0	1/1:15,0:14:2.76:63,3,0	1/1:4,0:3:6.43:45,6,0
chr10	27336895	.	C	CA	11206.96	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=0.077;DP=479;FS=16.728;HRun=8;HaplotypeScore=87.6024;InbreedingCoeff=0.9586;MQ=72.03;MQ0=0;MQRankSum=-5.525;QD=24.63;ReadPosRankSum=4.123;VQSLOD=3.7497;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,11:12:30.09:346,30,0	1/1:0,4:4:12.04:138,12,0	0/0:15,0:15:26.36:0,26,265	0/0:9,0:9:14.88:0,15,121	1/1:3,34:36:99:1103,102,0	1/1:3,1:15:28.41:144,28,0	1/1:1,0:7:17.16:91,17,0	1/1:6,33:39:77.58:1118,78,0	1/1:2,14:16:42.12:485,42,0	1/1:2,12:14:33.10:379,33,0	1/1:1,25:26:75.18:847,75,0	1/1:2,0:14:28.41:144,28,0	1/1:1,1:14:34.24:185,34,0	1/1:5,0:16:36.93:190,37,0	1/1:3,0:13:25.57:130,26,0	1/1:4,12:16:33.10:381,33,0	1/1:1,21:22:51.11:574,51,0	1/1:2,11:13:27.04:297,27,0	1/1:2,18:20:54.16:623,54,0	1/1:2,18:20:54.16:623,54,0	1/1:1,7:8:18.05:208,18,0	1/1:2,0:17:36.73:192,37,0	1/1:2,0:16:36.93:188,37,0	1/1:1,0:6:17.04:87,17,0	1/1:1,16:17:39.12:450,39,0	1/1:2,25:27:75.22:866,75,0	1/1:3,20:23:57.17:658,57,0	1/1:1,21:22:66.20:761,66,0
chr10	27337343	.	T	TTTG	8220.02	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-6.616;DP=681;FS=8.674;HRun=0;HaplotypeScore=132.0077;InbreedingCoeff=0.9665;MQ=75.59;MQ0=4;MQRankSum=1.278;QD=20.81;ReadPosRankSum=-3.151;VQSLOD=3.7630;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:9,27:38:21:389,21,0	0/0:6,0:6:12.01:0,12,136	0/0:28,0:24:35.21:0,35,386	0/0:33,0:29:39.48:0,39,535	1/1:23,0:23:41.99:424,42,0	0/0:21,0:21:41.96:0,42,394	0/0:25,0:25:38.99:0,39,351	1/1:44,0:44:77.81:907,78,0	1/1:6,17:24:27.09:557,27,0	1/1:9,18:26:53.96:567,54,0	1/1:1,15:16:35.38:262,35,0	0/0:15,0:15:20.90:0,21,189	0/0:23,0:23:48:0,48,446	0/0:24,0:24:30.02:0,30,277	0/0:35,0:35:54.05:0,54,502	1/1:3,26:29:39.13:805,39,0	0/0:23,0:23:51.15:0,51,711	1/1:3,5:9:4.47:121,4,0	1/1:20,0:22:10.99:328,11,0	1/1:7,25:32:71.43:743,71,0	1/1:8,22:31:18.53:372,19,0	0/0:18,0:18:41.83:0,42,344	0/0:19,0:19:14.67:0,15,128	0/0:16,0:16:24.02:0,24,224	1/1:22,0:22:54:514,54,0	1/1:24,0:24:63.03:685,63,0	1/1:7,31:38:45.15:928,45,0	1/1:3,12:15:30.10:619,30,0
chr10	27337356	.	TTGC	T	2201.30	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=-0.683;DP=666;FS=7.082;HRun=0;HaplotypeScore=137.0416;InbreedingCoeff=0.8356;MQ=63.47;MQ0=10;MQRankSum=4.725;QD=10.33;ReadPosRankSum=5.121;VQSLOD=2.7532;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:26.52:0,27,328	0/0:10,0:10:20.83:0,21,189	0/1:23,0:19:6.05:6,0,93	0/0:38,0:29:46.76:0,47,437	0/0:21,0:21:20.99:0,21,214	1/1:19,0:18:14.96:125,15,0	1/1:8,15:23:17.99:232,18,0	0/0:38,0:37:39.16:0,39,342	0/0:27,0:27:50.99:0,51,649	0/0:23,0:22:14.93:0,15,185	0/0:19,0:18:8.81:0,9,113	1/1:3,10:13:12.04:171,12,0	1/1:3,19:22:38.88:555,39,0	1/1:4,23:27:21.07:299,21,0	1/1:6,27:33:39.13:555,39,0	0/0:33,0:33:57.12:0,57,779	0/0:22,0:22:62.86:0,63,919	0/0:10,0:9:9.10:0,9,132	0/0:17,0:17:14.96:0,15,159	0/0:29,0:29:29.99:0,30,381	0/0:32,0:31:29.34:0,29,373	1/1:9,7:16:14.87:162,15,0	1/1:6,14:20:2.76:43,3,0	1/1:2,15:17:18.06:256,18,0	0/0:20,0:20:0.87:0,1,54	0/0:29,0:29:32.89:0,33,330	0/0:35,0:35:57.13:0,57,801	0/0:16,0:16:42.04:0,42,547
chr10	27337815	.	AT	A	6808.32	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=12.968;DP=499;FS=2.578;HRun=8;HaplotypeScore=86.5775;InbreedingCoeff=0.9909;MQ=83.57;MQ0=0;MQRankSum=-2.068;QD=24.49;ReadPosRankSum=2.901;VQSLOD=5.5549;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,12:13:36.06:348,36,0	0/0:7,0:7:21.06:0,21,254	0/0:27,0:20:39.02:0,39,430	0/0:24,0:21:34.98:0,35,416	1/1:1,33:34:93.14:897,93,0	0/0:25,0:25:69.20:0,69,821	0/0:4,0:4:12.02:0,12,133	1/1:2,19:21:57.01:550,57,0	1/1:2,8:10:21.03:203,21,0	1/1:1,17:18:51.08:493,51,0	1/1:2,22:24:63.09:603,63,0	0/0:7,0:7:18.05:0,18,216	0/0:18,0:18:51.16:0,51,616	0/0:20,0:20:54.17:0,54,652	0/0:14,0:15:45:0,45,522	1/1:1,14:15:42.07:406,42,0	0/0:21,0:21:57.15:0,57,672	1/1:0,5:5:15.02:145,15,0	1/1:0,21:22:65.10:600,65,0	1/1:2,24:26:60.09:579,60,0	1/1:1,9:10:27.04:261,27,0	0/0:19,0:19:54.02:0,54,619	0/0:22,0:22:60.17:0,60,714	0/0:12,0:12:30.09:0,30,362	1/1:1,22:23:51.08:492,51,0	1/1:0,21:21:63.06:595,63,0	1/1:5,16:21:39.06:376,39,0	1/1:5,10:15:27.04:261,27,0
chr10	27338133	.	TAAAAAA	T	8936.65	PASS	AB=0.580;AC=28;AF=0.500;AN=56;BaseQRankSum=6.114;DP=443;FS=2.894;HRun=17;HaplotypeScore=118.7884;InbreedingCoeff=0.7981;MQ=69.39;MQ0=2;MQRankSum=-9.661;QD=31.69;ReadPosRankSum=4.848;VQSLOD=3.6027;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,8:10:21.01:367,21,0	0/0:2,0:5:12:0,12,103	0/0:27,0:17:27.42:0,27,280	0/0:17,0:8:6.16:0,6,58	1/1:5,27:34:57.89:962,58,0	0/0:13,0:15:33.10:0,33,866	0/0:5,0:6:12.04:0,12,327	1/1:6,19:25:56.82:870,57,0	1/1:0,10:10:21.07:367,21,0	0/1:4,22:26:26.16:1055,0,26	1/1:4,21:25:59.42:951,59,0	0/0:10,0:11:30.09:0,30,805	0/0:12,0:13:30.10:0,30,836	0/0:13,0:13:24.08:0,24,673	0/0:9,0:10:18.06:0,18,422	1/1:4,7:11:20.50:355,20,0	0/0:8,0:12:24:0,24,206	0/1:5,8:13:87.39:93,0,87	1/1:3,9:12:23.81:390,24,0	1/1:6,21:27:43.98:748,44,0	1/1:1,6:7:8.90:122,9,0	0/0:7,0:8:12.04:0,12,274	0/0:11,0:14:23.90:0,24,629	0/0:7,0:7:6.90:0,7,124	1/1:2,20:22:44.56:774,45,0	1/1:4,23:27:72.19:1218,72,0	1/1:12,16:28:28.41:509,28,0	1/1:0,5:5:9.03:157,9,0
chr10	27338543	.	C	CCAA	20492.18	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-14.539;DP=669;FS=12.243;HRun=0;HaplotypeScore=88.3166;InbreedingCoeff=0.9992;MQ=88.67;MQ0=0;MQRankSum=-3.931;QD=57.08;ReadPosRankSum=2.170;VQSLOD=6.1311;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,26:29:47.18:1169,47,0	0/0:12,0:12:36.12:0,36,604	0/0:30,0:30:81.25:0,81,1289	0/0:24,0:24:66.10:0,66,1034	1/1:2,10:12:20.09:544,20,0	0/0:25,0:25:75.26:0,75,1268	0/0:22,0:22:63.12:0,63,963	1/1:9,30:40:99:2374,114,0	1/1:1,28:29:84.29:1934,84,0	1/1:2,19:22:63.22:1425,63,0	1/1:2,19:22:60.17:1333,60,0	0/0:25,0:25:75.26:0,75,1275	0/0:14,0:14:42.14:0,42,716	0/0:18,0:18:54.18:0,54,909	0/0:36,0:36:99:0,102,1689	1/1:0,22:23:57.20:1315,57,0	0/0:29,0:28:81.28:0,81,1381	1/1:1,10:12:30.10:691,30,0	1/1:6,9:16:48.13:975,48,0	1/1:1,29:32:81.14:1717,81,0	1/1:0,23:23:45.15:1038,45,0	0/0:18,0:18:48.12:0,48,733	0/0:19,0:19:51.13:0,51,757	0/0:38,0:38:99:0,105,1734	1/1:2,21:23:60.21:1381,60,0	1/1:1,19:22:66.18:1358,66,0	1/1:3,33:38:99:2271,99,0	1/1:0,15:15:42.14:968,42,0
chr10	27339305	.	TACACACGCACGCGCGCGCGCACAC	T	3667.57	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.696;DP=615;FS=7.629;HRun=0;HaplotypeScore=345.9944;InbreedingCoeff=0.8268;MQ=58.83;MQ0=6;MQRankSum=-6.329;QD=114.61;ReadPosRankSum=4.018;VQSLOD=2.4237;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:42.43:0,42,1590	0/0:13,0:13:39.13:0,39,3782	0/0:10,0:7:16.55:0,17,285	0/0:13,0:9:12.04:0,12,555	0/0:28,0:28:46.36:0,46,1420	0/0:19,0:19:48.16:0,48,4012	0/0:23,0:22:57.18:0,57,4114	0/0:30,0:30:69.21:0,69,3228	0/0:13,0:13:18.50:0,18,945	0/0:18,0:18:41.72:0,42,2626	0/0:16,0:16:23.72:0,24,832	0/0:16,0:16:39.12:0,39,2681	0/0:12,0:12:24.02:0,24,1522	0/0:25,0:25:63.15:0,63,4567	1/1:3,29:32:57.20:3668,57,0	0/0:16,0:16:30.09:0,30,1171	0/0:31,0:31:84.26:0,84,8158	0/0:16,0:16:15.44:0,15,665	0/0:19,0:19:51.18:0,51,3530	0/0:34,0:34:54.66:0,55,3747	0/0:20,0:20:6.01:0,6,123	0/0:23,0:23:57.14:0,57,4653	0/0:28,0:28:60.19:0,60,4458	0/0:28,0:27:63.16:0,63,5681	0/0:35,0:35:54.14:0,54,2786	0/0:32,0:32:83.39:0,83,5017	0/0:14,0:14:14.56:0,15,681	0/0:7,0:7:14.91:0,15,869
chr10	27339312	.	GCA	G	179.28	PASS	AB=0.750;AC=3;AF=0.054;AN=56;BaseQRankSum=7.089;DP=596;FS=7.032;HRun=0;HaplotypeScore=151.6818;InbreedingCoeff=0.4568;MQ=56.33;MQ0=6;MQRankSum=-5.420;QD=4.72;ReadPosRankSum=0.391;VQSLOD=2.5827;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:41.21:0,41,382	0/0:16,0:16:48.13:0,48,791	0/0:9,0:6:5.14:0,5,75	0/0:10,0:6:1.43:0,1,41	0/0:32,0:32:49.40:0,49,383	0/0:23,0:23:51.08:0,51,742	0/0:24,0:23:57.15:0,57,876	0/0:28,0:28:30.76:0,31,709	0/0:12,0:12:17.75:0,18,177	0/0:19,0:19:31.40:0,31,392	0/0:16,0:16:23.49:0,23,204	0/0:13,0:13:36.08:0,36,522	0/0:10,0:10:21.07:0,21,340	0/0:26,0:26:63.14:0,63,949	1/1:29,0:29:52.29:252,52,0	0/0:14,0:14:23.69:0,24,224	0/0:28,1:29:38.91:0,39,1350	0/0:12,0:12:8.32:0,8,93	0/0:17,0:17:39.94:0,40,527	0/0:29,0:29:58.82:0,59,603	0/0:20,0:20:6.46:0,6,51	0/0:24,0:24:53.89:0,54,830	0/0:26,0:26:60.01:0,60,875	0/0:26,0:25:63.18:0,63,1037	0/0:35,0:35:55.28:0,55,499	0/0:29,0:29:71.76:0,72,785	0/0:12,0:12:14.62:0,15,143	0/1:6,3:9:32.76:33,0,164
chr10	27339324	.	G	GCGCGCACA	11140.72	PASS	AB=0.750;AC=30;AF=0.536;AN=56;BaseQRankSum=-10.542;DP=642;FS=5.242;HRun=0;HaplotypeScore=166.0159;InbreedingCoeff=0.8367;MQ=53.96;MQ0=7;MQRankSum=-6.918;QD=29.71;ReadPosRankSum=-2.653;VQSLOD=3.5560;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:6,36:53:12.34:540,12,0	0/0:18,0:18:54.16:0,54,1156	0/1:14,0:7:21.03:21,0,71	0/0:12,0:8:11.85:0,12,126	1/1:1,23:28:8.70:342,9,0	0/0:5,0:24:38.99:0,39,416	0/0:11,0:25:45.05:0,45,576	1/1:17,0:27:68.93:1002,69,0	1/1:0,8:12:9.03:404,9,0	1/1:2,16:23:46.06:1202,46,0	1/1:1,11:17:6.02:269,6,0	0/0:5,0:14:27.05:0,27,342	0/0:5,0:12:18.03:0,18,260	0/0:8,0:24:48.06:0,48,645	0/0:29,0:29:52.82:0,53,901	1/1:0,11:12:9.03:359,9,0	0/0:35,0:37:84.79:0,85,2179	1/1:3,0:18:12.04:384,12,0	1/1:1,14:21:59.98:1550,60,0	1/1:2,25:33:32.82:1415,33,0	0/1:0,0:24:0:0,0,0	0/0:7,0:22:44.80:0,45,553	0/0:6,0:21:42.02:0,42,446	0/0:6,0:26:40.81:0,41,586	1/1:3,30:39:24.08:1068,24,0	1/1:2,21:29:66.19:1883,66,0	1/1:0,14:17:5.87:270,6,0	1/1:8,0:8:20.67:432,21,0
chr10	27339844	.	T	TAC	8942.37	PASS	AB=1.000;AC=29;AF=0.659;AN=44;BaseQRankSum=-6.405;DP=322;FS=1.883;HRun=0;HaplotypeScore=48.6917;InbreedingCoeff=0.7077;MQ=72.96;MQ0=2;MQRankSum=0.319;QD=32.76;ReadPosRankSum=4.958;VQSLOD=6.7543;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,13:16:12.13:500,12,0	./.	./.	0/0:19,0:9:5.75:0,6,36	1/1:1,16:17:16.10:480,16,0	./.	0/0:3,0:3:5.85:0,6,36	1/1:4,38:43:99:1739,110,0	1/1:2,9:10:15.05:267,15,0	1/1:3,14:17:42.10:651,42,0	1/1:0,19:19:36.12:658,36,0	0/0:3,0:3:2.96:0,3,19	0/0:4,0:4:2.98:0,3,22	0/0:3,0:3:2.98:0,3,22	0/0:7,0:7:5.93:0,6,90	1/1:2,8:10:15.05:274,15,0	0/1:13,0:13:0.51:1,0,34	1/1:2,15:17:10.59:422,11,0	1/1:2,15:17:36.20:605,36,0	1/1:0,19:19:42.14:764,42,0	./.	./.	0/0:1,0:1:3:0,3,25	./.	1/1:2,24:26:45.15:823,45,0	1/1:1,15:16:45.06:680,45,0	1/1:2,22:25:34.13:860,34,0	1/1:0,7:7:12.04:219,12,0
chr10	27339846	.	C	CATAT	554.09	PASS	AB=0.980;AC=11;AF=0.275;AN=40;BaseQRankSum=-4.045;DP=309;FS=0.000;HRun=0;HaplotypeScore=89.7948;InbreedingCoeff=0.4943;MQ=73.28;MQ0=2;MQRankSum=-0.875;QD=9.39;ReadPosRankSum=-2.311;VQSLOD=2.1531;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:16:9.11:0,9,43	./.	0/1:5,0:1:0:0,0,0	0/0:19,0:9:2.47:0,2,35	0/0:17,0:17:20.38:0,20,101	./.	1/1:2,0:2:2.60:10,3,0	0/0:42,0:42:51.41:0,51,469	0/0:10,0:9:11.01:0,11,35	0/1:15,0:16:34.96:35,0,118	0/0:19,0:19:8.82:0,9,52	./.	./.	./.	1/1:7,0:7:6.01:77,6,0	0/0:8,0:8:14.09:0,14,58	1/1:3,9:12:21.07:526,21,0	0/0:16,0:16:18.29:0,18,85	0/0:17,0:17:31.67:0,32,214	0/0:18,0:18:21.79:0,22,72	./.	./.	1/1:1,0:1:3:25,3,0	./.	0/0:24,0:24:33.72:0,34,105	0/1:16,0:16:7.59:8,0,147	0/0:24,0:24:32.40:0,32,94	0/0:7,0:7:5.85:0,6,16
chr10	27340467	.	A	ATGTGTGTGTG	18407.17	PASS	AB=1.000;AC=50;AF=0.893;AN=56;BaseQRankSum=-1.776;DP=645;FS=0.995;HRun=0;HaplotypeScore=230.3792;InbreedingCoeff=0.6403;MQ=53.83;MQ0=12;MQRankSum=-2.928;QD=32.29;ReadPosRankSum=4.286;VQSLOD=4.4476;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:15,4:20:9.03:400,9,0	1/1:12,0:12:6.02:186,6,0	0/0:32,0:15:15.05:0,15,267	0/0:43,0:28:27.76:0,28,453	1/1:15,9:25:12.04:588,12,0	1/1:30,0:30:11.97:330,12,0	1/1:17,0:17:15.04:248,15,0	1/1:50,0:48:8.19:1678,8,0	1/1:6,10:16:24.08:1142,24,0	1/1:12,9:21:40.38:1387,40,0	1/1:12,7:19:18.06:898,18,0	1/1:17,0:16:14.99:349,15,0	1/1:22,0:21:18.06:419,18,0	1/1:22,0:22:12.04:414,12,0	1/1:13,0:13:6.02:214,6,0	1/1:16,14:30:34.93:1389,35,0	0/1:16,0:15:0:0,0,0	1/1:15,0:14:14.72:301,15,0	1/1:20,0:21:30.10:691,30,0	1/1:13,12:26:39.13:1699,39,0	1/1:15,0:15:9.03:226,9,0	0/1:25,0:24:0:0,0,0	1/1:9,0:9:12.04:271,12,0	1/1:25,0:25:1.30:82,1,0	1/1:19,16:34:36.12:1727,36,0	1/1:19,5:26:42.14:1287,42,0	1/1:7,20:29:44.25:2155,44,0	1/1:8,0:8:9.03:324,9,0
chr10	27340479	.	G	GTGTGTGTGTGTGTGTGTGTGTGTA	17664.45	PASS	AB=1.000;AC=40;AF=0.714;AN=56;BaseQRankSum=3.607;DP=693;FS=6.041;HRun=0;HaplotypeScore=388.6748;InbreedingCoeff=-0.1067;MQ=50.35;MQ0=17;MQRankSum=-5.907;QD=29.69;ReadPosRankSum=9.473;VQSLOD=1.0968;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:22:69.71:159,0,70	1/1:7,0:7:15.05:1281,15,0	0/0:51,0:19:30.59:0,31,430	0/0:47,0:29:34.33:0,34,686	0/1:22,0:22:29.89:263,0,30	1/1:30,0:30:23.97:1022,24,0	1/1:16,0:16:5.07:1037,5,0	0/1:47,0:45:99:1191,0,143	0/1:21,0:20:65.11:237,0,65	0/1:27,0:26:79.45:620,0,79	1/1:19,0:19:18.04:335,18,0	1/1:18,0:17:21.48:813,21,0	1/1:24,0:23:42.10:2108,42,0	1/1:26,0:26:36.03:1826,36,0	1/1:4,1:22:6.02:611,6,0	0/1:30,0:30:47.30:450,0,47	1/1:8,1:21:6.02:560,6,0	1/1:13,0:12:8.10:493,8,0	0/1:18,0:17:97.47:485,0,97	0/1:31,0:30:90.05:502,0,90	0/1:16,0:15:75.50:146,0,75	1/1:8,1:29:3.48:240,3,0	1/1:11,0:11:15.04:905,15,0	1/1:24,0:24:11.49:601,11,0	1/1:34,0:33:14.13:478,14,0	0/1:29,0:28:93.10:713,0,93	0/1:27,0:27:28.92:429,0,29	0/1:9,0:9:9.95:159,0,10
chr10	27340491	.	G	GT	901.13	PASS	AB=0.873;AC=17;AF=0.304;AN=56;BaseQRankSum=9.021;DP=607;FS=6.493;HRun=1;HaplotypeScore=159.2765;InbreedingCoeff=-0.4683;MQ=50.71;MQ0=17;MQRankSum=-7.267;QD=2.63;ReadPosRankSum=5.916;VQSLOD=-0.2771;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:23.94:0,24,314	0/0:5,3:8:5.53:0,6,79	0/0:58,0:25:69.16:0,69,845	0/0:42,0:24:53.36:0,53,692	0/0:19,0:19:2.21:0,2,314	0/0:13,14:27:2.16:0,2,190	0/1:10,2:13:5.73:6,0,71	0/1:28,12:38:99:325,0,757	0/1:18,0:17:12.48:12,0,241	0/0:23,0:22:27.07:0,27,614	0/1:11,0:11:39.13:39,0,61	0/1:14,6:19:39.11:39,0,239	0/1:13,10:22:95.25:95,0,197	0/1:18,9:27:17.75:18,0,311	0/1:18,0:18:2.64:3,0,71	0/1:20,1:21:12.38:12,0,262	0/1:17,1:18:10.29:10,0,123	0/1:8,4:12:99:106,0,134	0/1:14,4:17:99:149,0,313	0/1:24,1:24:10.99:11,0,385	0/1:18,0:17:47.61:48,0,290	0/0:14,1:15:2.58:0,3,40	0/1:10,6:16:34.10:34,0,108	0/0:12,7:20:8.71:0,9,100	0/1:19,1:19:79.29:79,0,120	0/0:21,1:21:6.14:0,6,609	0/1:22,0:22:63.10:63,0,226	0/0:5,4:9:12:0,12,140
chr10	27341647	.	CAAAAT	C	13479.41	PASS	AB=1.000;AC=31;AF=0.554;AN=56;BaseQRankSum=8.882;DP=422;FS=4.806;HRun=0;HaplotypeScore=102.7627;InbreedingCoeff=0.9226;MQ=63.38;MQ0=0;MQRankSum=-12.431;QD=50.30;ReadPosRankSum=-0.634;VQSLOD=4.7663;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,9:13:18.06:389,18,0	0/0:9,0:9:27.07:0,27,784	0/0:15,0:15:25.16:0,25,1169	0/1:9,0:8:9.15:9,0,323	1/1:2,25:27:60.20:1301,60,0	0/0:19,0:19:51.18:0,51,1599	0/0:9,0:9:27.09:0,27,840	1/1:8,23:31:66.22:1418,66,0	1/1:1,8:9:24.08:521,24,0	1/1:2,26:28:81.26:1715,81,0	1/1:2,16:18:45.15:977,45,0	0/0:8,0:8:24.08:0,24,745	0/0:16,0:16:48.16:0,48,1524	0/0:10,0:10:30.10:0,30,952	0/0:20,0:20:57.20:0,57,1776	1/1:0,16:17:36.12:781,36,0	0/0:15,0:15:45.15:0,45,1359	1/1:2,7:9:21.07:456,21,0	1/1:1,9:10:27.09:552,27,0	1/1:4,21:25:57.19:1236,57,0	1/1:1,8:9:24.08:521,24,0	0/0:6,0:6:18.06:0,18,571	0/0:23,0:23:69.24:0,69,2072	0/0:4,0:4:12.04:0,12,381	1/1:1,9:10:27.09:586,27,0	1/1:1,18:19:54.14:1087,54,0	1/1:1,29:30:78.27:1692,78,0	1/1:1,3:4:12.04:240,12,0
chr10	27342267	.	A	ACCTT	23581.39	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-0.816;DP=358;FS=51.187;HRun=0;HaplotypeScore=74.7574;InbreedingCoeff=0.9579;MQ=87.61;MQ0=0;MQRankSum=-10.406;QD=79.13;ReadPosRankSum=3.347;VQSLOD=2.1245;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,9:10:27.09:776,27,0	0/0:9,0:9:27.09:0,27,566	0/0:19,0:19:54.16:0,54,1040	0/0:17,0:17:29.18:0,29,859	1/1:1,19:20:60.20:1631,60,0	1/1:0,7:8:21.07:608,21,0	1/1:0,6:6:18.06:521,18,0	1/1:6,17:25:75.24:1882,75,0	1/1:1,12:13:39.13:1127,39,0	1/1:2,13:15:36.12:1038,36,0	1/1:1,14:16:45.15:1301,45,0	1/1:0,8:8:24.08:695,24,0	1/1:1,13:14:42.14:1216,42,0	1/1:2,15:17:51.18:1442,51,0	1/1:0,13:13:39.13:1128,39,0	1/1:1,13:14:42.14:1214,42,0	0/0:15,0:15:39.13:0,39,818	1/1:0,5:5:12.04:347,12,0	1/1:4,9:14:39.13:979,39,0	1/1:2,16:18:51.16:1408,51,0	1/1:1,5:6:11.06:330,11,0	1/1:0,8:10:24.08:695,24,0	1/1:0,11:12:33.11:953,33,0	1/1:0,5:5:8.64:259,9,0	1/1:5,7:12:33.11:948,33,0	1/1:5,11:16:48.16:1314,48,0	1/1:1,13:14:42.14:1164,42,0	1/1:0,7:7:21.07:607,21,0
chr10	27342294	.	C	CTT	6408.48	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-2.325;DP=313;FS=1.145;HRun=8;HaplotypeScore=93.1498;InbreedingCoeff=0.8956;MQ=56.72;MQ0=7;MQRankSum=-6.831;QD=28.36;ReadPosRankSum=0.608;VQSLOD=4.8697;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,4:12:15.01:210,15,0	1/1:0,0:5:12.48:43,12,0	0/0:10,0:6:9.02:0,9,99	0/0:9,0:6:11.60:0,12,97	1/1:8,12:22:47.73:644,48,0	0/0:7,0:7:12.01:0,12,133	0/0:5,0:5:9.02:0,9,100	1/1:16,12:27:48.08:698,48,0	1/1:5,8:13:27.09:426,27,0	1/1:5,10:15:33.11:523,33,0	1/1:4,8:13:30.10:456,30,0	0/0:8,0:8:21.05:0,21,234	0/0:10,0:10:27.06:0,27,301	0/0:13,0:13:24.04:0,24,256	0/0:10,0:10:24.04:0,24,258	1/1:4,6:10:27.07:398,27,0	1/1:5,0:18:32.44:111,32,0	1/1:0,2:2:3.01:48,3,0	1/1:12,5:17:26.81:364,27,0	1/1:7,8:17:38.57:550,39,0	1/1:2,1:3:5.98:67,6,0	0/0:6,0:6:15.04:0,15,165	0/0:8,0:8:15.04:0,15,167	0/0:1,0:1:3.01:0,3,33	1/1:2,10:12:33.09:498,33,0	1/1:1,11:12:33.11:523,33,0	1/1:3,12:14:30.10:468,30,0	1/1:3,6:8:24.08:380,24,0
chr10	27344842	.	A	AAAT	11863.46	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=2.184;DP=466;FS=2.643;HRun=0;HaplotypeScore=82.7136;InbreedingCoeff=0.9462;MQ=76.62;MQ0=2;MQRankSum=-2.709;QD=28.86;ReadPosRankSum=1.065;VQSLOD=4.8434;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,0:28:41.71:521,42,0	0/0:5,0:5:15.05:0,15,239	0/0:9,0:7:4.95:0,5,161	0/0:14,0:13:26.57:0,27,284	1/1:1,0:29:80.35:663,80,0	1/1:0,18:19:39.13:869,39,0	1/1:0,10:10:24.08:525,24,0	1/1:3,0:34:56.76:685,57,0	1/1:0,0:14:32.96:275,33,0	1/1:1,0:23:65.97:595,66,0	1/1:0,0:21:56.88:475,57,0	1/1:1,13:15:30.10:667,30,0	1/1:0,10:10:27.09:599,27,0	1/1:1,13:15:33.11:704,33,0	1/1:1,12:13:24.04:488,24,0	1/1:1,0:17:38.96:325,39,0	0/0:27,0:27:78.27:0,78,1244	1/1:1,0:13:32.96:274,33,0	1/1:2,0:14:14.62:284,15,0	1/1:0,0:21:53.90:459,54,0	1/1:0,0:6:17.98:150,18,0	1/1:0,11:11:32.94:635,33,0	1/1:2,16:19:34.65:777,35,0	1/1:0,8:8:21.07:467,21,0	1/1:0,0:18:47.95:400,48,0	1/1:0,0:24:71.93:622,72,0	1/1:1,0:17:32.19:257,32,0	1/1:1,0:10:17.98:150,18,0
chr10	27345121	.	CCTT	C	541.93	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-1.722;DP=522;FS=1.081;HRun=0;HaplotypeScore=95.4525;InbreedingCoeff=0.9769;MQ=86.96;MQ0=0;MQRankSum=-2.643;QD=31.88;ReadPosRankSum=2.283;VQSLOD=4.0424;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:42.14:0,42,920	0/0:5,0:5:15.05:0,15,316	0/0:23,0:23:63.21:0,63,1316	0/0:15,0:15:45.10:0,45,934	0/0:26,0:26:78.27:0,78,1741	0/0:28,0:28:81.28:0,81,1809	0/0:12,0:12:30.09:0,30,612	0/0:31,0:31:93.32:0,93,2054	0/0:20,0:20:60.21:0,60,1305	0/0:30,0:30:87.30:0,87,1940	0/0:20,0:20:60.19:0,60,1298	0/0:13,0:13:39.13:0,39,842	0/0:17,0:17:48.15:0,48,1029	0/0:22,0:22:63.22:0,63,1407	1/1:1,16:17:39.13:637,39,0	0/0:17,0:17:45.15:0,45,968	0/0:23,0:23:63.20:0,63,1339	0/0:9,0:9:27.09:0,27,603	0/0:9,0:9:27.09:0,27,603	0/0:31,0:31:84.29:0,84,1830	0/0:10,0:10:27.09:0,27,603	0/0:20,0:20:57.20:0,57,1249	0/0:23,0:23:57.19:0,57,1243	0/0:14,0:14:36.11:0,36,761	0/0:21,0:21:60.20:0,60,1299	0/0:18,0:18:54.18:0,54,1166	0/0:25,0:25:63.22:0,63,1378	0/0:8,0:8:21.07:0,21,469
chr10	27346160	.	A	AT	11345.10	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-15.477;DP=598;FS=1.430;HRun=6;HaplotypeScore=62.2745;InbreedingCoeff=0.9787;MQ=71.13;MQ0=0;MQRankSum=0.143;QD=31.69;ReadPosRankSum=1.780;VQSLOD=5.4210;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,41:46:99:1355,108,0	0/0:14,0:14:42.10:0,42,428	0/0:17,0:16:4.55:0,5,161	0/0:21,0:19:25.82:0,26,343	1/1:2,26:28:75.13:906,75,0	0/0:22,0:22:60.07:0,60,585	0/0:18,0:18:51.10:0,51,514	1/1:6,19:24:29.62:686,30,0	1/1:0,13:13:33.11:415,33,0	1/1:1,28:29:81.25:1004,81,0	1/1:1,22:23:66.21:830,66,0	0/0:17,0:17:51.12:0,51,520	0/0:14,0:14:42.08:0,42,421	0/0:21,0:21:60.12:0,60,605	0/0:26,0:26:72.12:0,72,714	1/1:4,14:18:42.13:528,42,0	0/0:10,0:10:27.06:0,27,275	1/1:3,19:22:45.14:566,45,0	1/1:0,13:13:39.12:491,39,0	1/1:1,37:37:99:1303,105,0	1/1:0,7:7:15.05:189,15,0	0/0:16,0:17:50.13:0,50,488	0/0:19,0:19:57.13:0,57,581	0/0:24,0:24:69.06:0,69,683	1/1:1,26:27:75.24:944,75,0	1/1:3,28:31:84.25:1042,84,0	1/1:4,19:23:45.14:565,45,0	1/1:1,14:15:42.13:522,42,0
chr10	27346674	.	T	TAC	10910.04	PASS	AB=0.547;AC=27;AF=0.482;AN=56;BaseQRankSum=-13.374;DP=637;FS=1.129;HRun=0;HaplotypeScore=78.9112;InbreedingCoeff=0.8061;MQ=66.81;MQ0=6;MQRankSum=0.186;QD=32.37;ReadPosRankSum=-0.016;VQSLOD=6.8167;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,20:28:13.66:710,14,0	0/0:14,0:14:39.12:0,39,483	0/0:40,0:31:62.32:0,62,716	0/0:38,0:26:44.28:0,44,522	1/1:3,18:20:44.64:736,45,0	0/0:22,0:22:57.18:0,57,707	0/0:11,0:11:24.08:0,24,297	1/1:9,31:40:96.24:1479,96,0	1/1:4,16:20:42.02:689,42,0	1/1:6,12:18:7.96:582,8,0	0/1:4,11:15:10.10:366,0,10	0/0:21,0:21:45.14:0,45,557	0/0:29,0:29:65.21:0,65,887	0/0:21,0:21:54.17:0,54,669	0/0:31,0:31:72.23:0,72,892	1/1:6,17:24:13.98:750,14,0	0/0:13,0:13:30.09:0,30,372	1/1:4,13:18:27.09:441,27,0	1/1:5,10:15:30.10:461,30,0	1/1:5,17:21:36.12:590,36,0	1/1:7,20:28:51.17:836,51,0	0/0:10,0:10:27.07:0,27,319	0/0:25,0:25:69.22:0,69,855	0/0:25,0:25:51.16:0,51,632	1/1:0,17:16:42.14:689,42,0	0/1:3,22:25:2.13:1008,0,2	1/1:12,25:38:78.26:1251,78,0	0/1:1,7:8:13.10:320,0,13
chr10	27347743	.	G	GACCTAAGGGGTT	29474.78	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=18.473;DP=776;FS=0.292;HRun=0;HaplotypeScore=276.0492;InbreedingCoeff=0.9985;MQ=73.02;MQ0=5;MQRankSum=-19.946;QD=121.80;ReadPosRankSum=-3.658;VQSLOD=3.8634;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,99,3588	0/0:14,0:14:36.10:0,36,1163	0/0:21,0:21:54.18:0,54,1719	0/0:14,0:14:36.12:0,36,1280	0/0:27,0:27:78.27:0,78,2852	1/1:11,19:30:84.29:4479,84,0	1/1:11,7:18:51.13:2284,51,0	0/0:36,0:36:96.33:0,96,3472	0/0:19,0:19:54.19:0,54,2053	0/0:40,0:40:99:0,117,4170	0/0:27,0:27:81.25:0,81,2846	1/1:24,11:32:87.23:3698,87,0	1/1:18,9:26:75.26:3696,75,0	1/1:22,18:39:99:5094,114,0	0/0:45,0:45:99:0,135,5016	0/0:27,0:27:81.26:0,81,2925	0/0:16,0:16:48.16:0,48,1750	0/0:13,0:13:29.90:0,30,908	0/0:30,0:30:90.27:0,90,3017	0/0:29,0:29:81.28:0,81,2916	0/0:25,0:25:72.21:0,72,2544	1/1:17,16:33:87.27:4069,87,0	1/1:18,16:34:84.19:3709,84,0	1/1:14,10:24:63.21:2444,63,0	0/0:33,0:33:93.29:0,93,3135	0/0:31,0:31:87.30:0,87,3230	0/0:44,0:44:99:0,129,4699	0/0:7,0:7:18.06:0,18,638
chr10	27347747	.	T	TA	4090.53	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=16.481;DP=726;FS=2.152;HRun=1;HaplotypeScore=153.9507;InbreedingCoeff=0.9984;MQ=76.48;MQ0=5;MQRankSum=-15.155;QD=21.53;ReadPosRankSum=3.073;VQSLOD=3.9606;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,99,1382	0/0:14,0:14:33.11:0,33,462	0/0:22,0:22:57.08:0,57,754	0/0:15,0:15:36.12:0,36,503	0/0:28,0:28:84.28:0,84,1174	1/1:1,27:28:60.18:732,60,0	1/1:1,11:12:21.06:244,21,0	0/0:37,0:37:99:0,108,1511	0/0:22,0:22:66.20:0,66,886	0/0:40,0:40:99:0,120,1676	0/0:26,0:26:78.26:0,78,1085	1/1:0,23:20:39.12:490,39,0	1/1:1,23:23:33.10:387,33,0	1/1:0,32:31:63.19:775,63,0	0/0:48,0:48:99:0,144,1994	0/0:26,0:26:78.25:0,78,1075	0/0:18,0:18:54.18:0,54,755	0/0:12,0:12:33.11:0,33,461	0/0:28,0:28:84.28:0,84,1174	0/0:27,0:27:81.26:0,81,1117	0/0:24,0:24:69.21:0,69,947	1/1:0,26:26:54.08:641,54,0	1/1:1,27:28:47.65:543,48,0	1/1:0,16:16:28.57:278,29,0	0/0:31,0:31:93.31:0,93,1301	0/0:31,0:31:90.29:0,90,1243	0/0:45,0:45:99:0,135,1850	0/0:7,0:7:21.07:0,21,294
chr10	27348131	.	AG	A	7668.58	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=15.838;DP=648;FS=0.310;HRun=1;HaplotypeScore=110.0266;InbreedingCoeff=0.9927;MQ=66.87;MQ0=0;MQRankSum=-11.236;QD=37.59;ReadPosRankSum=-0.328;VQSLOD=4.4767;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:87.19:0,87,1239	0/0:15,0:15:37.04:0,37,136	0/0:17,0:16:39.56:0,40,519	0/0:29,0:26:65.57:0,66,923	0/0:21,0:21:63.18:0,63,899	1/1:2,22:24:72.11:937,72,0	1/1:0,21:21:60.11:794,60,0	0/0:21,0:21:60.18:0,60,845	0/0:21,0:21:63.19:0,63,903	0/0:26,0:26:78.19:0,78,1104	0/0:20,0:20:59.86:0,60,840	1/1:1,23:24:72.20:980,72,0	1/1:0,32:32:84.20:1127,84,0	1/1:0,28:28:81.18:1084,81,0	0/0:22,0:22:66.18:0,66,928	0/0:17,0:17:51.15:0,51,723	0/0:23,0:23:10.40:0,10,128	0/0:17,0:17:51.14:0,51,705	0/0:21,0:20:63.13:0,63,853	0/0:28,0:28:84.28:0,84,1257	0/0:21,0:21:63.20:0,63,923	1/1:0,30:30:87.19:1167,87,0	1/1:1,24:25:65.96:827,66,0	1/1:0,20:20:57.12:753,57,0	0/0:25,0:25:75.25:0,75,1122	0/0:26,0:26:78.16:0,78,1065	0/0:28,0:28:81.22:0,81,1148	0/0:15,0:15:45.15:0,45,672
chr10	27348152	.	AGGAGGAGTG	A	8124.18	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=13.660;DP=633;FS=8.829;HRun=0;HaplotypeScore=209.5273;InbreedingCoeff=0.9878;MQ=59.28;MQ0=0;MQRankSum=-13.690;QD=42.53;ReadPosRankSum=1.385;VQSLOD=3.6336;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:51.17:0,51,1809	0/0:16,0:16:36.07:0,36,1001	0/0:26,0:21:26.30:0,26,840	0/0:27,0:25:18.55:0,19,549	0/0:25,0:25:54.18:0,54,2051	1/1:10,19:29:57.20:1557,57,0	1/1:14,4:18:18.04:320,18,0	0/0:14,0:14:15.05:0,15,568	0/0:23,0:23:57.20:0,57,2337	0/0:30,0:30:60.21:0,60,2137	0/0:19,0:19:36.12:0,36,1503	1/1:12,14:26:54.18:1387,54,0	1/1:11,17:28:63.21:1546,63,0	1/1:15,12:27:45.15:1171,45,0	0/0:18,0:18:36.12:0,36,1591	0/0:17,0:17:42.14:0,42,1550	0/0:21,0:21:18.55:0,19,1917	0/0:14,0:14:27.09:0,27,1144	0/0:24,0:23:45.12:0,45,1405	0/0:29,0:29:54.12:0,54,2046	0/0:22,0:22:39.13:0,39,1662	1/1:11,13:24:39.13:1089,39,0	1/1:13,10:23:33.11:849,33,0	1/1:13,3:16:12.04:206,12,0	0/0:27,0:27:54.19:0,54,2129	0/0:24,0:24:33.11:0,33,1434	0/0:29,0:29:66.23:0,66,2803	0/0:11,0:11:30.10:0,30,1248
chr10	27348889	.	C	CA	18555.16	PASS	AB=0.536;AC=31;AF=0.554;AN=56;BaseQRankSum=-15.941;DP=732;FS=1.601;HRun=1;HaplotypeScore=69.3879;InbreedingCoeff=0.9255;MQ=60.44;MQ0=4;MQRankSum=1.494;QD=40.69;ReadPosRankSum=1.146;VQSLOD=5.5113;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,58:60:99:2472,166,0	0/0:6,0:6:18.06:0,18,234	0/0:19,0:16:36.12:0,36,540	0/0:25,0:24:45.23:0,45,658	1/1:3,34:37:99:1433,99,0	0/0:22,0:22:63.20:0,63,817	0/0:21,0:21:60.20:0,60,779	1/1:2,40:42:99:1796,120,0	1/1:1,15:16:42.14:630,42,0	1/1:1,29:30:87.29:1303,87,0	1/1:1,19:20:60.16:863,60,0	0/0:23,0:23:69.22:0,69,886	0/0:31,0:31:90.29:0,90,1168	0/0:35,0:35:99:0,102,1295	1/1:1,35:36:96.19:1439,96,0	1/1:0,35:35:99:1529,102,0	0/0:21,0:20:54.13:0,54,682	0/1:2,13:15:34.92:455,0,35	1/1:5,21:23:66.18:947,66,0	1/1:2,17:19:45.15:653,45,0	1/1:0,34:34:93.32:1394,93,0	0/0:17,0:17:42.14:0,42,545	0/0:30,0:30:87.24:0,87,1079	0/0:26,0:26:78.25:0,78,1012	1/1:2,30:32:81.27:1214,81,0	1/1:0,20:20:60.20:898,60,0	1/1:0,28:28:84.28:1259,84,0	1/1:0,6:6:18.06:270,18,0
chr10	27350051	.	GAAGGAAGGAAGGAAAA	G	646.50	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=3.104;DP=395;FS=7.589;HRun=0;HaplotypeScore=188.6553;InbreedingCoeff=0.7443;MQ=56.69;MQ0=5;MQRankSum=-3.545;QD=38.03;ReadPosRankSum=1.593;VQSLOD=2.2894;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:18.06:0,18,1047	1/1:0,2:2:3.01:135,3,0	0/0:32,0:15:24.08:0,24,857	0/0:22,0:17:32.33:0,32,1545	0/0:7,0:7:9.03:0,9,361	0/0:18,0:18:42.07:0,42,1657	0/0:26,0:26:60.17:0,60,2801	0/0:10,0:9:15.05:0,15,343	0/0:10,0:10:24.07:0,24,880	0/0:15,0:15:39.13:0,39,1902	0/0:5,0:5:9.03:0,9,390	0/0:17,0:17:36.12:0,36,2051	0/0:14,0:14:24.08:0,24,1591	0/0:17,0:17:45.15:0,45,2106	0/0:22,0:22:42.14:0,42,1738	0/0:9,0:9:24.08:0,24,1143	1/1:9,6:15:15.05:616,15,0	0/0:10,0:10:24.08:0,24,1045	0/0:13,0:12:30.10:0,30,872	0/0:8,0:8:18.02:0,18,542	0/0:15,0:15:42.14:0,42,1778	0/0:25,0:25:63.14:0,63,2683	0/0:10,0:10:21.03:0,21,811	0/0:17,0:17:45.15:0,45,2421	0/0:11,0:11:30.06:0,30,1101	0/0:16,0:16:48.16:0,48,2497	0/0:12,0:12:30.01:0,30,1310	0/0:1,0:1:3.01:0,3,40
chr10	27350081	.	C	CGGAG	2024.72	PASS	AB=0.833;AC=27;AF=0.519;AN=52;BaseQRankSum=-4.307;DP=235;FS=9.753;HRun=0;HaplotypeScore=66.0338;InbreedingCoeff=0.7007;MQ=60.37;MQ0=3;MQRankSum=0.191;QD=21.77;ReadPosRankSum=0.649;VQSLOD=2.3731;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,4:8:7.27:153,7,0	0/0:2,0:2:3.01:0,3,47	0/0:16,0:8:10.85:0,11,142	0/0:19,0:13:11.99:0,12,276	1/1:2,0:2:3.01:39,3,0	0/0:8,0:8:18.06:0,18,305	0/0:19,0:19:42.87:0,43,653	1/1:4,0:4:3.01:31,3,0	1/1:4,0:4:5.96:94,6,0	1/1:5,4:9:12.04:281,12,0	1/1:2,2:4:3.01:75,3,0	0/0:12,0:12:18.06:0,18,306	0/0:10,0:9:18.06:0,18,307	0/0:7,0:7:9.02:0,9,127	1/1:6,1:7:12.04:233,12,0	1/1:4,2:6:5.66:150,6,0	0/0:9,0:9:15.89:0,16,193	0/1:4,1:5:9.28:149,0,9	./.	1/1:2,2:4:6.02:146,6,0	1/1:9,1:10:9.47:86,9,0	0/0:15,0:15:24.08:0,24,405	0/0:8,0:7:18.06:0,18,291	0/0:12,0:12:18.53:0,19,293	1/1:5,4:9:6.02:150,6,0	1/1:6,7:14:21.90:402,22,0	1/1:3,4:7:9.03:225,9,0	./.
chr10	27350121	.	GGGAGGGAT	G	960.74	PASS	AB=0.943;AC=25;AF=0.500;AN=50;BaseQRankSum=-0.714;DP=149;FS=4.464;HRun=0;HaplotypeScore=55.8721;InbreedingCoeff=0.2959;MQ=47.91;MQ0=6;MQRankSum=-1.219;QD=12.81;ReadPosRankSum=-1.089;VQSLOD=1.2667;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:7,0:7:21.93:22,0,223	0/0:3,0:2:3.01:0,3,88	0/0:23,0:8:13.52:0,14,177	0/0:22,0:4:5.43:0,5,162	0/0:4,0:3:3.01:0,3,37	1/1:5,0:4:3.48:73,3,0	1/1:8,0:7:11.90:128,12,0	0/1:5,0:5:27.61:56,0,28	0/0:2,0:2:6.02:0,6,156	./.	0/0:1,0:1:3.01:0,3,72	0/1:3,2:5:2.52:197,0,3	1/1:4,1:5:3.01:54,3,0	1/1:2,3:5:9.03:132,9,0	1/1:3,0:3:5.98:67,6,0	0/0:2,0:2:3.01:0,3,57	0/0:7,0:7:12.04:0,12,322	0/1:3,0:3:14.29:14,0,62	1/1:2,0:2:0.89:2,1,0	1/1:1,0:1:2.94:18,3,0	0/0:3,0:3:1.08:0,1,48	1/1:3,2:5:6.02:152,6,0	1/1:4,3:6:6.02:152,6,0	1/1:6,0:6:5.94:44,6,0	0/0:6,0:6:8.96:0,9,219	0/1:8,0:8:0.08:0,0,118	./.	./.
chr10	27350128	.	A	AG	102.40	PASS	AB=1.000;AC=13;AF=0.260;AN=50;BaseQRankSum=0.555;DP=117;FS=3.836;HRun=3;HaplotypeScore=40.0834;InbreedingCoeff=0.3551;MQ=48.55;MQ0=5;MQRankSum=0.537;QD=3.94;ReadPosRankSum=-0.608;VQSLOD=0.0590;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:8:17.83:0,18,128	0/0:2,0:1:3.01:0,3,42	0/0:16,0:6:15.01:0,15,166	0/0:20,0:5:11.35:0,11,150	0/0:4,0:4:2.99:0,3,24	1/1:1,3:3:3.01:41,3,0	1/1:4,1:4:2.50:40,2,0	0/0:5,0:5:8.32:0,8,48	0/0:2,0:2:5.94:0,6,42	./.	0/0:1,0:1:3:0,3,25	0/1:2,0:5:17.69:58,0,18	0/0:1,0:1:1.82:0,2,5	1/1:3,0:3:3:32,3,0	0/0:3,0:3:8.03:0,8,56	0/0:2,0:2:0.81:0,1,20	0/0:7,0:7:12.04:0,12,161	0/0:2,0:2:4.94:0,5,22	0/0:1,0:1:2.97:0,3,20	1/1:1,0:1:0.47:1,0,0	0/0:2,0:2:5.85:0,6,34	0/0:3,0:3:1.16:0,1,4	1/1:4,0:3:5.88:47,6,0	1/1:4,0:4:0.55:2,1,0	0/0:5,0:5:8.84:0,9,67	0/0:4,0:4:11.63:0,12,68	./.	./.
chr10	27350140	.	G	GAGGA	846.23	PASS	AB=1.000;AC=35;AF=0.761;AN=46;BaseQRankSum=-0.030;DP=113;FS=15.396;HRun=0;HaplotypeScore=49.8027;InbreedingCoeff=0.3823;MQ=47.67;MQ0=1;MQRankSum=-0.290;QD=11.92;ReadPosRankSum=-0.968;VQSLOD=0.6920;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:9,0:9:9.90:82,10,0	0/0:2,0:2:0.68:0,1,2	./.	0/0:15,0:5:6.01:0,6,80	0/0:2,3:5:2.92:0,3,19	0/1:1,0:1:0:0,0,0	./.	1/1:8,0:8:7.37:46,7,0	1/1:2,1:3:3.48:57,3,0	1/1:1,0:1:0.89:2,1,0	1/1:3,0:3:5.98:58,6,0	0/1:3,0:3:3.52:13,0,4	./.	1/1:4,0:4:5.90:37,6,0	1/1:4,0:4:4.78:26,5,0	1/1:6,0:6:17.72:115,18,0	0/0:4,0:4:6.13:0,6,33	1/1:3,0:3:4.51:24,5,0	1/1:4,0:4:3.52:28,4,0	0/1:3,0:3:0.08:0,0,0	1/1:2,0:2:5.99:49,6,0	1/1:3,0:3:2.90:16,3,0	./.	1/1:2,0:2:5.40:25,5,0	1/1:5,0:5:8.64:57,9,0	1/1:5,1:6:15.01:261,15,0	1/1:1,0:1:3.01:65,3,0	./.
chr10	27350159	.	GATGT	G	3006.36	PASS	AB=1.000;AC=43;AF=0.860;AN=50;BaseQRankSum=-3.107;DP=141;FS=4.086;HRun=0;HaplotypeScore=51.6802;InbreedingCoeff=0.0236;MQ=47.31;MQ0=1;MQRankSum=0.214;QD=24.85;ReadPosRankSum=-3.098;VQSLOD=2.4219;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:12,0:12:18.61:272,0,19	1/1:0,3:3:6.02:95,6,0	./.	0/0:8,0:5:11.96:0,12,125	1/1:7,0:7:8.80:107,9,0	1/1:3,0:3:7.57:81,8,0	1/1:2,0:2:6.02:67,6,0	1/1:0,14:14:42.02:536,42,0	0/1:4,0:4:21.27:45,0,21	1/1:3,0:3:7.84:116,8,0	1/1:4,0:4:9.40:92,9,0	1/1:4,0:4:10.44:84,10,0	./.	1/1:5,0:5:11.84:120,12,0	1/1:4,1:5:14.98:190,15,0	1/1:7,0:7:2.32:131,2,0	1/1:3,0:3:9.03:136,9,0	0/1:3,0:3:11.15:32,0,11	1/1:0,7:7:21:245,21,0	1/1:6,0:6:7.36:59,7,0	0/1:4,0:4:7.51:58,0,8	1/1:2,0:2:2.90:16,3,0	./.	1/1:3,0:3:9:88,9,0	1/1:9,0:9:20.13:238,20,0	0/1:7,0:7:10.77:166,0,11	1/1:3,0:3:7.84:109,8,0	1/1:1,0:1:3.01:51,3,0
chr10	27350665	.	TA	T	4104.36	PASS	AB=0.721;AC=30;AF=0.536;AN=56;BaseQRankSum=3.940;DP=434;FS=8.411;HRun=12;HaplotypeScore=97.8456;InbreedingCoeff=0.7960;MQ=68.78;MQ0=2;MQRankSum=0.224;QD=13.77;ReadPosRankSum=3.137;VQSLOD=3.5326;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,14:17:11.40:271,11,0	0/0:6,0:6:15:0,15,143	0/0:13,0:12:17.91:0,18,155	0/0:11,1:10:8.90:0,9,69	1/1:8,24:32:34.23:433,34,0	0/1:15,4:20:24.81:25,0,291	0/0:11,0:13:26.88:0,27,252	1/1:9,17:26:18.77:293,19,0	0/1:5,9:14:3.57:159,0,4	1/1:10,13:23:38.84:302,39,0	1/1:2,19:22:23.81:365,24,0	0/0:9,0:9:18.01:0,18,165	0/0:11,0:11:15.01:0,15,141	0/0:13,0:13:30:0,30,283	0/0:17,1:18:39.06:0,39,388	1/1:2,15:17:41.84:325,42,0	0/0:19,0:20:44.82:0,45,414	1/1:2,11:16:35.93:250,36,0	1/1:2,13:15:8.40:248,8,0	1/1:6,14:20:44.73:341,45,0	1/1:1,8:10:25.94:192,26,0	0/0:3,0:3:9.02:0,9,91	0/0:7,0:7:15.03:0,15,152	0/0:8,0:8:8.64:0,9,105	1/1:5,16:23:2.73:299,3,0	1/1:5,13:18:38.78:294,39,0	1/1:6,13:19:31.91:238,32,0	1/1:1,5:6:8.96:70,9,0
chr10	27351791	.	T	TTAAA	4505.94	PASS	AC=50;AF=0.962;AN=52;BaseQRankSum=0.234;DP=262;FS=2.853;HRun=0;HaplotypeScore=77.6227;InbreedingCoeff=0.1907;MQ=68.63;MQ0=0;MQRankSum=-1.736;QD=18.70;ReadPosRankSum=1.736;VQSLOD=4.2002;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,0:7:8.45:71,8,0	1/1:2,0:4:3.01:53,3,0	1/1:7,0:5:1.25:3,1,0	0/0:8,0:8:5.16:0,5,81	1/1:2,0:4:5.99:74,6,0	1/1:6,7:13:24.08:585,24,0	1/1:4,4:8:12.04:293,12,0	1/1:42,0:36:78.54:848,79,0	1/1:2,0:3:3.01:52,3,0	1/1:9,0:9:12.03:165,12,0	1/1:5,0:5:3:29,3,0	1/1:2,2:4:6.02:147,6,0	1/1:7,7:14:18.06:440,18,0	1/1:6,3:9:12.02:243,12,0	1/1:9,0:9:3.01:37,3,0	1/1:4,0:5:3.01:52,3,0	1/1:5,0:10:9.03:157,9,0	1/1:4,0:5:3.01:53,3,0	1/1:8,0:11:15.05:241,15,0	1/1:8,0:8:3:29,3,0	1/1:4,0:5:3.01:52,3,0	./.	./.	1/1:4,1:5:3.48:74,3,0	1/1:12,0:13:6.02:105,6,0	1/1:6,0:11:9.03:158,9,0	1/1:12,0:17:18.06:309,18,0	1/1:13,0:13:23.99:237,24,0
chr10	27351813	.	ATT	A	702.91	PASS	AB=0.779;AC=6;AF=0.107;AN=56;BaseQRankSum=2.203;DP=179;FS=4.435;HRun=2;HaplotypeScore=40.7902;InbreedingCoeff=-0.1858;MQ=62.49;MQ0=0;MQRankSum=-4.850;QD=9.76;ReadPosRankSum=-1.775;VQSLOD=0.0735;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:7,0:7:25.73:26,0,335	0/0:4,0:4:12.01:0,12,141	0/0:5,0:4:6.38:0,6,156	0/0:5,0:5:15.05:0,15,279	0/0:5,0:5:15.04:0,15,241	0/0:11,0:11:33.05:0,33,444	0/0:5,0:5:15.04:0,15,191	0/1:28,14:36:99:430,0,1340	0/0:1,0:1:3.01:0,3,32	0/1:2,2:4:85.13:85,0,109	0/1:2,1:3:39.50:40,0,112	0/0:4,0:4:12.04:0,12,186	0/0:11,0:11:27.07:0,27,371	0/0:6,0:6:18.04:0,18,239	0/0:1,0:1:3.01:0,3,61	0/0:1,0:1:3.01:0,3,32	0/0:11,0:11:30.07:0,30,507	0/0:4,0:4:12.04:0,12,213	0/0:10,0:10:30.10:0,30,576	0/1:3,1:4:36.56:37,0,136	0/0:2,0:2:6.02:0,6,89	0/0:1,0:1:3:0,3,25	0/0:1,0:1:3:0,3,27	0/0:1,0:1:3.01:0,3,33	0/0:5,0:5:15.05:0,15,263	0/0:3,0:3:9.03:0,9,124	0/0:10,0:10:30.10:0,30,565	0/1:7,5:12:99:207,0,389
chr10	27352565	.	AT	A	9301.19	PASS	AB=0.559;AC=47;AF=0.839;AN=56;BaseQRankSum=2.717;DP=479;FS=2.125;HRun=9;HaplotypeScore=57.9500;InbreedingCoeff=0.8380;MQ=67.66;MQ0=0;MQRankSum=0.234;QD=21.89;ReadPosRankSum=2.438;VQSLOD=5.8019;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,20:21:55.85:499,56,0	0/0:15,0:15:30.08:0,30,338	0/0:10,0:9:11.70:0,12,103	0/0:10,0:7:12.04:0,12,139	1/1:5,28:33:74.99:679,75,0	1/1:4,15:19:39.01:357,39,0	1/1:4,10:14:27.01:247,27,0	1/1:2,19:21:57.01:516,57,0	1/1:2,13:15:33.02:302,33,0	1/1:5,21:26:63.02:577,63,0	1/1:2,20:22:60.02:549,60,0	1/1:1,11:12:33.02:302,33,0	1/1:3,16:19:45.02:412,45,0	1/1:2,15:17:42.02:384,42,0	1/1:0,11:11:27.01:247,27,0	1/1:2,11:13:33.02:302,33,0	0/0:19,0:19:51.15:0,51,588	0/1:4,15:19:15.21:291,0,15	1/1:3,17:20:47.99:431,48,0	1/1:2,23:25:69.04:631,69,0	1/1:0,14:14:39.02:357,39,0	1/1:1,5:6:15.01:137,15,0	1/1:2,17:19:44.97:404,45,0	1/1:3,6:9:15.01:137,15,0	1/1:0,26:26:63.03:574,63,0	1/1:1,14:15:42.02:384,42,0	1/1:2,20:23:53.06:473,53,0	1/1:2,4:6:12.01:109,12,0
chr10	27354288	.	A	AG	19366.66	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-15.209;DP=743;FS=2.757;HRun=1;HaplotypeScore=70.0572;InbreedingCoeff=0.9999;MQ=84.94;MQ0=0;MQRankSum=-4.074;QD=40.77;ReadPosRankSum=0.259;VQSLOD=5.4002;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,51:52:99:2157,144,0	1/1:0,14:14:36.12:539,36,0	0/0:31,0:31:84.26:0,84,1061	0/0:24,0:24:61.94:0,62,802	1/1:1,27:28:78.26:1169,78,0	0/0:22,0:22:63.18:0,63,802	0/0:19,0:19:57.17:0,57,725	1/1:1,34:35:96.32:1434,96,0	1/1:0,27:27:75.25:1124,75,0	1/1:0,24:24:69.23:1024,69,0	1/1:3,20:23:60.20:899,60,0	0/0:24,0:24:72.22:0,72,921	0/0:26,0:26:75.24:0,75,974	0/0:22,0:22:66.20:0,66,843	0/0:39,0:39:99:0,117,1519	1/1:1,31:32:87.29:1304,87,0	1/1:1,27:28:75.13:1124,75,0	1/1:5,11:16:39.12:559,39,0	1/1:2,25:27:75.25:1124,75,0	1/1:1,31:32:84.28:1259,84,0	1/1:1,32:33:84.28:1259,84,0	0/0:12,0:12:33.11:0,33,428	0/0:23,0:23:66.20:0,66,842	0/0:26,0:26:78.25:0,78,1013	1/1:0,27:27:72.24:1078,72,0	1/1:0,20:20:60.17:873,60,0	1/1:1,34:35:99:1529,102,0	1/1:1,21:22:62.95:910,63,0
chr10	27355331	.	C	CA	6021.71	PASS	AB=0.812;AC=47;AF=0.839;AN=56;BaseQRankSum=-3.301;DP=535;FS=6.502;HRun=11;HaplotypeScore=70.9180;InbreedingCoeff=0.2185;MQ=51.99;MQ0=9;MQRankSum=0.790;QD=11.65;ReadPosRankSum=0.153;VQSLOD=4.3086;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,27:36:74.98:745,75,0	1/1:2,1:11:17.04:86,17,0	0/0:10,0:6:11.82:0,12,82	0/1:9,0:8:45.54:57,0,46	1/1:9,21:27:42:403,42,0	1/1:22,0:18:10.82:53,11,0	1/1:19,0:13:5.96:22,6,0	1/1:13,20:35:40.36:596,40,0	1/1:2,6:8:17.87:167,18,0	1/1:8,17:25:10.48:440,10,0	1/1:5,15:21:18.63:344,19,0	1/1:9,0:6:3.91:9,4,0	1/1:17,0:14:11.52:57,12,0	1/1:12,0:10:2.27:24,2,0	1/1:17,0:15:1.39:13,1,0	1/1:5,18:23:4.63:410,5,0	1/1:12,0:34:45.45:230,45,0	0/1:4,7:12:8.37:91,0,8	1/1:8,15:23:26.68:425,27,0	1/1:7,15:21:15.80:331,16,0	1/1:6,10:17:11.17:199,11,0	0/1:11,0:7:0:0,0,0	1/1:10,0:7:5.77:25,6,0	0/0:8,0:8:1.69:0,2,5	1/1:8,15:23:27.94:276,28,0	1/1:5,16:25:46.92:471,47,0	0/1:17,16:35:10.13:496,0,10	0/1:6,2:7:14.22:52,0,14
chr10	27356692	.	A	ATG	682.44	PASS	AB=0.820;AC=16;AF=0.308;AN=52;BaseQRankSum=-3.173;DP=555;FS=0.000;HRun=0;HaplotypeScore=77.4020;InbreedingCoeff=0.3425;MQ=54.56;MQ0=16;MQRankSum=1.165;QD=3.55;ReadPosRankSum=0.644;VQSLOD=2.0084;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:31:23.82:0,24,213	1/1:8,0:8:5.48:31,5,0	./.	./.	0/0:28,0:30:35.74:0,36,347	0/1:10,6:17:5.12:80,0,5	1/1:10,7:17:12.04:179,12,0	1/1:30,0:27:0.47:1,0,0	0/0:15,0:17:17.71:0,18,159	0/0:15,0:17:14.83:0,15,132	0/0:13,0:14:17.86:0,18,162	0/1:11,0:11:8.44:43,0,8	1/1:20,1:21:6.02:85,6,0	0/1:9,0:9:34.84:75,0,35	0/0:21,0:24:27.77:0,28,240	0/0:19,0:19:15.02:0,15,155	1/1:10,4:14:9.02:116,9,0	0/0:29,0:30:29.17:0,29,272	0/0:17,0:15:3.01:0,3,30	0/0:15,0:15:14.21:0,14,113	0/0:25,0:21:14.52:0,15,136	0/1:11,8:20:30.41:78,0,30	0/1:13,8:21:34.68:74,0,35	0/1:16,7:22:23.70:80,0,24	0/0:25,0:25:20.38:0,20,193	0/0:20,0:24:23.25:0,23,168	0/0:14,0:17:17.71:0,18,159	0/0:8,0:7:13.71:0,14,134
chr10	27357276	.	CT	C	6453.31	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-14.672;DP=584;FS=11.445;HRun=11;HaplotypeScore=82.8345;InbreedingCoeff=0.9447;MQ=74.22;MQ0=1;MQRankSum=-0.259;QD=17.98;ReadPosRankSum=0.829;VQSLOD=5.1085;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,20:21:56.93:468,57,0	1/1:1,5:6:14.98:123,15,0	0/0:23,0:16:26.24:0,26,271	0/0:22,1:15:3.31:0,3,105	1/1:3,33:36:98.75:794,99,0	0/0:7,0:26:54.24:0,54,285	0/0:4,0:15:28.67:0,29,156	1/1:8,21:31:57.91:443,58,0	1/1:7,18:25:41.91:345,42,0	1/1:4,21:25:59.90:488,60,0	1/1:1,20:21:59.88:486,60,0	0/0:7,0:26:48.45:0,48,251	0/0:2,0:20:28.19:0,28,153	0/0:3,0:19:36.93:0,37,185	0/0:9,0:28:57.05:0,57,318	1/1:1,14:15:38.95:320,39,0	1/1:3,5:9:14.01:104,14,0	1/1:1,6:7:11.98:99,12,0	1/1:6,12:18:35.92:289,36,0	1/1:5,28:35:81.86:650,82,0	1/1:3,17:20:47.94:394,48,0	0/0:4,0:18:30.23:0,30,171	0/0:3,0:21:36.78:0,37,185	0/0:0,0:5:11.36:0,11,57	1/1:2,20:23:52.98:425,53,0	1/1:4,19:23:56.82:459,57,0	1/1:9,27:36:43.78:517,44,0	1/1:5,3:8:5.58:49,6,0
chr10	27359157	.	CT	C	1141.60	PASS	AB=0.929;AC=22;AF=0.407;AN=54;BaseQRankSum=-8.306;DP=414;FS=5.980;HRun=13;HaplotypeScore=67.7660;InbreedingCoeff=0.7770;MQ=68.09;MQ0=0;MQRankSum=1.170;QD=8.65;ReadPosRankSum=3.120;VQSLOD=2.8313;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:14,1:15:7.23:0,7,146	1/1:1,0:8:10.08:29,10,0	0/1:5,1:5:9.41:9,0,73	0/1:8,0:7:8.09:8,0,27	0/0:24,0:24:63:0,63,341	1/1:4,11:15:3.63:190,4,0	1/1:3,10:14:5.68:196,6,0	0/0:26,1:27:26.41:0,26,225	0/0:20,0:20:31.37:0,31,164	0/0:22,0:22:36.56:0,37,192	0/0:20,0:20:45.48:0,45,239	1/1:1,9:10:26.84:197,27,0	1/1:4,3:8:7.95:50,8,0	1/1:0,7:8:16.95:115,17,0	0/0:15,1:17:19.97:0,20,333	0/0:12,0:12:22.73:0,23,115	1/1:1,0:18:30.55:88,31,0	0/0:17,0:17:34.33:0,34,184	0/0:25,0:25:36.43:0,36,271	0/0:22,0:22:54.52:0,55,309	./.	1/1:2,13:15:11.02:216,11,0	1/1:4,9:14:13.77:93,14,0	1/1:1,7:8:20.87:153,21,0	0/0:15,0:15:25.40:0,25,127	0/0:22,0:22:45.71:0,46,252	0/0:16,0:16:31.59:0,32,180	0/0:7,0:7:14.34:0,14,79
chr10	27359170	.	T	TA	6672.76	PASS	AB=1.000;AC=31;AF=0.554;AN=56;BaseQRankSum=-11.223;DP=443;FS=4.775;HRun=1;HaplotypeScore=58.0683;InbreedingCoeff=0.9172;MQ=75.42;MQ0=0;MQRankSum=1.743;QD=24.00;ReadPosRankSum=0.250;VQSLOD=4.6655;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,11:15:21.02:246,21,0	0/0:8,0:8:17.62:0,18,104	0/0:12,0:12:23.66:0,24,218	0/1:7,0:6:3.28:3,0,16	1/1:2,19:22:60.49:696,60,0	0/0:19,0:19:50.21:0,50,360	0/0:14,0:14:41.36:0,41,284	1/1:6,24:31:76.45:763,76,0	1/1:1,19:20:28.33:348,28,0	1/1:11,10:21:58.66:595,59,0	1/1:3,18:21:54.22:581,54,0	0/0:12,0:12:35.47:0,35,235	0/0:7,0:7:17.82:0,18,127	0/0:11,0:11:26.57:0,27,180	0/0:18,0:18:50.62:0,51,551	1/1:0,13:13:24.08:307,24,0	0/0:22,0:22:59.01:0,59,379	1/1:1,11:13:30.07:368,30,0	1/1:5,22:28:72.44:732,72,0	1/1:3,21:25:58.73:625,59,0	1/1:2,0:2:5.99:50,6,0	0/0:16,0:16:38.28:0,38,239	0/0:17,0:17:41.38:0,41,276	0/0:9,0:9:26.59:0,27,175	1/1:1,10:11:26.11:312,26,0	1/1:3,17:24:62.96:607,63,0	1/1:5,14:20:7.07:288,7,0	1/1:0,5:5:12.04:153,12,0
chr10	27360518	.	GT	G	10469.20	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=14.828;DP=586;FS=7.082;HRun=4;HaplotypeScore=54.5223;InbreedingCoeff=0.9978;MQ=87.32;MQ0=0;MQRankSum=-7.964;QD=33.34;ReadPosRankSum=1.550;VQSLOD=5.3546;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,12:12:36.11:432,36,0	0/0:9,0:9:24.08:0,24,336	0/0:17,0:17:42.11:0,42,551	0/0:22,0:22:66.19:0,66,895	1/1:2,26:28:75.23:900,75,0	0/0:37,0:37:99:0,102,1427	0/0:19,0:19:57.16:0,57,762	1/1:2,21:23:63.18:745,63,0	1/1:1,27:28:75.23:900,75,0	1/1:0,24:24:69.21:828,69,0	1/1:3,22:25:66.20:788,66,0	0/0:25,0:25:75.21:0,75,1028	0/0:27,0:27:75.25:0,75,1049	0/0:14,0:14:42.14:0,42,588	0/0:24,0:24:72.24:0,72,1007	1/1:0,21:21:63.19:756,63,0	0/0:21,0:21:57.18:0,57,781	1/1:1,7:8:21.06:252,21,0	1/1:1,20:21:60.15:694,60,0	1/1:0,29:29:81.25:971,81,0	1/1:0,9:9:27.08:324,27,0	0/0:24,0:24:72.23:0,72,985	0/0:26,0:26:72.24:0,72,1007	0/0:7,0:7:18.06:0,18,252	1/1:0,21:21:60.18:720,60,0	1/1:0,22:22:63.19:756,63,0	1/1:1,31:32:87.27:1044,87,0	1/1:1,10:11:30.09:360,30,0
chr10	27361905	.	GCA	G	3688.82	PASS	AB=0.946;AC=25;AF=0.446;AN=56;BaseQRankSum=-9.400;DP=478;FS=5.079;HRun=0;HaplotypeScore=85.0770;InbreedingCoeff=0.5428;MQ=63.16;MQ0=8;MQRankSum=1.106;QD=13.46;ReadPosRankSum=1.583;VQSLOD=3.2971;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:54.18:0,54,804	0/0:1,0:6:18.01:0,18,179	0/1:25,0:11:2.08:2,0,128	0/1:15,0:8:1.03:1,0,42	0/0:10,0:10:18.06:0,18,275	1/1:5,15:20:42.12:495,42,0	1/1:7,12:19:27.08:318,27,0	0/0:28,0:28:45.10:0,45,631	0/0:19,1:20:10.34:0,10,553	0/1:13,0:13:0.07:0,0,403	0/0:22,0:22:27.09:0,27,417	1/1:3,13:19:41.62:429,42,0	1/1:3,13:16:36.11:424,36,0	1/1:4,14:17:27.08:318,27,0	1/1:6,14:20:36.11:424,36,0	0/1:29,1:30:14.57:15,0,665	0/0:8,0:24:48:0,48,442	0/0:9,0:9:15.01:0,15,232	0/1:5,0:5:8.13:8,0,41	0/0:22,0:22:39.13:0,39,578	0/0:15,0:13:24.08:0,24,358	1/1:3,9:12:27.08:318,27,0	1/1:0,8:8:24.07:283,24,0	1/1:7,18:27:15.37:595,15,0	0/1:11,1:12:13.52:14,0,255	0/1:12,2:14:45.11:45,0,251	0/0:20,1:21:3.91:0,4,443	0/0:1,0:1:3.01:0,3,45
chr10	27361930	.	TTC	T	1935.82	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-4.911;DP=467;FS=0.400;HRun=0;HaplotypeScore=95.2908;InbreedingCoeff=0.9793;MQ=61.46;MQ0=8;MQRankSum=1.705;QD=7.81;ReadPosRankSum=-1.194;VQSLOD=3.1694;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:28:56.90:196,57,0	0/0:8,0:8:24.07:0,24,389	0/0:15,0:7:17.93:0,18,226	0/0:12,0:5:8.01:0,8,78	1/1:12,1:13:30.32:121,30,0	0/0:21,0:21:60.13:0,60,795	0/0:13,0:13:30.06:0,30,394	1/1:23,0:23:52.78:253,53,0	1/1:17,2:19:37.21:194,37,0	1/1:14,2:16:37.85:216,38,0	1/1:15,0:15:35.41:132,35,0	0/0:21,0:21:57.06:0,57,764	0/0:18,0:18:50.90:0,51,726	0/0:18,0:17:36.12:0,36,529	0/0:18,0:18:48.16:0,48,699	1/1:25,0:25:50.26:185,50,0	0/0:28,0:28:75.18:0,75,1249	1/1:13,0:13:22.09:76,22,0	1/1:8,0:7:15.70:59,16,0	1/1:17,0:17:43.13:169,43,0	1/1:14,0:12:28.13:117,28,0	0/0:12,0:12:36.12:0,36,524	0/0:10,0:10:30.10:0,30,410	0/0:24,0:24:69.12:0,69,890	1/1:13,0:13:25.81:110,26,0	1/1:14,0:14:36.32:162,36,0	1/1:24,0:24:39.90:142,40,0	1/1:5,0:5:9.98:34,10,0
chr10	27361931	.	TC	T	8222.43	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-8.203;DP=461;FS=0.837;HRun=1;HaplotypeScore=65.1785;InbreedingCoeff=0.9741;MQ=61.66;MQ0=6;MQRankSum=-0.459;QD=33.98;ReadPosRankSum=-1.115;VQSLOD=4.3054;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,26:26:69.23:959,69,0	0/0:8,0:8:24.07:0,24,316	0/0:15,0:7:17.93:0,18,194	0/0:13,0:5:4.37:0,4,44	1/1:1,12:13:36.11:486,36,0	0/0:21,0:21:59.98:0,60,735	0/0:13,0:13:30.06:0,30,381	1/1:0,21:21:63.11:773,63,0	1/1:2,17:19:45.08:578,45,0	1/1:2,14:16:45.07:541,45,0	1/1:0,15:15:42.10:563,42,0	0/0:22,0:22:60:0,60,751	0/0:18,0:18:51.15:0,51,680	0/0:17,0:16:36.11:0,36,499	0/0:18,0:18:48.11:0,48,615	1/1:1,24:25:60.16:812,60,0	0/0:28,0:28:74.54:0,75,978	1/1:0,13:13:27.09:375,27,0	1/1:0,7:7:21.04:269,21,0	1/1:0,17:17:51.09:667,51,0	1/1:3,10:12:32.89:415,33,0	0/0:12,0:12:36.12:0,36,499	0/0:10,0:10:30.08:0,30,395	0/0:24,0:24:69.08:0,69,859	1/1:0,13:13:30.09:403,30,0	1/1:0,14:14:42.12:553,42,0	1/1:0,24:24:48.14:662,48,0	1/1:0,5:5:12.04:167,12,0
chr10	27362122	.	CATATATATATATATATATATATACATATATAT	C	3686.17	PASS	AC=24;AF=0.750;AN=32;BaseQRankSum=1.600;DP=112;FS=0.000;HRun=0;HaplotypeScore=102.3352;InbreedingCoeff=0.3072;MQ=67.83;MQ0=3;MQRankSum=-0.400;QD=63.55;ReadPosRankSum=0.933;VQSLOD=2.2263;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,0:6:3.01:157,3,0	./.	./.	0/0:17,0:5:0.47:0,0,1	1/1:5,0:7:6.02:233,6,0	1/1:2,5:7:15.05:928,15,0	./.	0/0:15,0:13:0:0,0,2	./.	1/1:2,0:3:3.01:215,3,0	./.	1/1:2,2:4:9.03:429,9,0	1/1:1,1:2:6.02:272,6,0	1/1:0,1:1:3.01:234,3,0	./.	1/1:6,0:6:9:122,9,0	1/1:6,0:8:6.02:349,6,0	./.	0/0:4,0:4:3.01:0,3,38	0/0:3,0:3:0:0,0,0	./.	./.	./.	./.	1/1:2,0:3:6.02:189,6,0	1/1:3,0:4:3.01:214,3,0	1/1:5,0:7:6.02:344,6,0	./.
chr10	27363340	.	CAT	C	7384.83	PASS	AB=0.857;AC=34;AF=0.630;AN=54;BaseQRankSum=6.358;DP=319;FS=1.341;HRun=0;HaplotypeScore=45.7752;InbreedingCoeff=0.7541;MQ=81.97;MQ0=0;MQRankSum=-1.211;QD=28.85;ReadPosRankSum=1.061;VQSLOD=5.2985;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,5:6:15.05:193,15,0	1/1:1,9:10:27.09:347,27,0	0/0:11,0:10:2.78:0,3,50	0/1:15,0:11:0.69:1,0,49	1/1:3,20:23:48.15:618,48,0	0/0:19,0:19:39.13:0,39,652	0/0:6,0:6:18.06:0,18,304	1/1:7,30:37:90.28:1144,90,0	1/1:0,6:6:18.06:232,18,0	1/1:2,9:11:27.09:347,27,0	1/1:2,20:22:57.10:696,57,0	0/0:8,0:8:15.05:0,15,253	0/0:7,0:7:18.05:0,18,278	0/0:5,0:5:12.04:0,12,194	./.	1/1:0,4:4:12.04:154,12,0	1/1:1,21:22:60.20:772,60,0	1/1:3,8:11:21.07:270,21,0	1/1:3,15:18:45.10:547,45,0	1/1:2,11:13:27.09:347,27,0	1/1:1,4:5:12.04:154,12,0	0/0:1,0:1:3.01:0,3,51	0/0:2,0:2:6:0,6,74	0/0:4,0:4:3.01:0,3,51	1/1:1,14:15:33.11:425,33,0	1/1:2,17:19:51.16:644,51,0	1/1:0,14:14:33.11:425,33,0	0/1:3,2:5:41.57:68,0,42
chr10	27363384	.	T	TAA	110.89	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-2.370;DP=286;FS=1.988;HRun=7;HaplotypeScore=46.9761;InbreedingCoeff=0.5202;MQ=70.80;MQ0=1;MQRankSum=0.312;QD=27.72;ReadPosRankSum=0.663;VQSLOD=2.6444;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:7:15.03:0,15,175	0/0:7,0:7:18.05:0,18,210	0/0:5,0:5:9.02:0,9,100	0/0:5,0:3:8.96:0,9,85	0/0:18,0:18:48.13:0,48,558	0/0:16,0:16:39.11:0,39,454	0/0:7,0:7:21.06:0,21,245	0/0:25,0:25:60.14:0,60,683	0/0:6,0:6:18.04:0,18,198	0/0:18,0:18:54.15:0,54,619	0/0:14,0:14:36.09:0,36,408	0/0:7,0:7:18.05:0,18,210	0/0:12,0:12:33.10:0,33,384	0/0:5,0:5:15.04:0,15,175	1/1:0,4:4:12.04:196,12,0	0/0:8,0:8:18.03:0,18,199	0/0:17,0:17:39.08:0,39,443	0/0:14,0:14:33.10:0,33,383	0/0:14,0:14:42.12:0,42,489	0/0:11,0:11:27.08:0,27,314	0/0:3,0:3:9.03:0,9,105	0/0:1,0:1:3.01:0,3,35	0/0:1,0:1:3.01:0,3,35	0/0:1,0:1:3.01:0,3,35	0/0:24,0:24:45.06:0,45,493	0/0:15,0:15:45.12:0,45,515	0/0:14,0:14:39.10:0,39,442	0/0:7,0:7:18.05:0,18,210
chr10	27363585	.	G	GA	252.79	PASS	AC=2;AF=0.037;AN=54;BaseQRankSum=-4.011;DP=315;FS=2.923;HRun=2;HaplotypeScore=33.6364;InbreedingCoeff=0.7976;MQ=90.07;MQ0=0;MQRankSum=-0.769;QD=28.09;ReadPosRankSum=1.935;VQSLOD=3.2156;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:39.08:0,39,456	0/0:3,0:3:8.97:0,9,93	0/0:10,0:10:26.57:0,27,302	0/0:17,0:17:37.47:0,37,426	0/0:16,0:16:48.15:0,48,595	0/0:16,0:16:48.15:0,48,590	0/0:8,0:8:21.07:0,21,260	0/0:29,0:29:81.25:0,81,994	0/0:6,0:6:18.06:0,18,223	0/0:14,0:14:42.12:0,42,509	0/0:10,0:10:24.06:0,24,284	0/0:8,0:8:24.08:0,24,298	0/0:10,0:10:30.09:0,30,372	0/0:12,0:12:36.11:0,36,446	1/1:0,9:9:24.08:346,24,0	0/0:7,0:7:21.07:0,21,260	0/0:12,0:12:33.10:0,33,409	0/0:25,0:24:69.22:0,69,854	0/0:11,0:11:30.09:0,30,372	0/0:10,0:10:30.09:0,30,372	0/0:11,0:11:33.10:0,33,409	0/0:2,0:2:6.02:0,6,74	./.	0/0:3,0:3:9.03:0,9,112	0/0:9,0:9:27.08:0,27,335	0/0:17,0:17:48.15:0,48,595	0/0:18,0:18:51.16:0,51,629	0/0:9,0:9:27.06:0,27,320
chr10	27363657	.	A	AT	65.47	PASS	AC=2;AF=0.037;AN=54;BaseQRankSum=-2.306;DP=293;FS=0.000;HRun=6;HaplotypeScore=29.3050;InbreedingCoeff=0.6223;MQ=76.96;MQ0=0;MQRankSum=-0.375;QD=10.91;ReadPosRankSum=0.098;VQSLOD=0.0656;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:7:21.05:0,21,214	0/0:6,0:6:18.04:0,18,183	0/0:12,0:12:26.87:0,27,226	0/0:4,1:4:8.28:0,8,78	0/0:23,0:23:60.11:0,60,601	0/0:8,0:8:21.03:0,21,207	0/0:7,0:7:21.05:0,21,214	0/0:32,0:32:69.12:0,69,689	0/0:9,0:9:27.02:0,27,264	0/0:21,0:21:57.12:0,57,577	0/0:14,0:14:36.06:0,36,360	0/0:6,0:6:18.04:0,18,184	0/0:5,0:5:12.03:0,12,122	0/0:9,0:9:24.05:0,24,245	1/1:2,4:6:12.04:151,12,0	0/0:7,0:7:15.03:0,15,153	0/0:8,0:8:15.03:0,15,153	0/0:21,0:20:60.13:0,60,612	0/0:15,0:15:42.07:0,42,415	0/0:1,0:1:2.99:0,3,24	0/0:4,0:4:12.03:0,12,122	./.	0/0:3,0:3:9.02:0,9,92	0/0:3,0:3:9.02:0,9,92	0/0:16,0:16:45.10:0,45,459	0/0:20,0:20:54.12:0,54,551	0/0:17,0:16:48.08:0,48,481	0/0:7,0:7:11.72:0,12,122
chr10	27363845	.	T	TA	682.90	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-0.808;DP=448;FS=4.919;HRun=2;HaplotypeScore=48.4178;InbreedingCoeff=0.9420;MQ=82.92;MQ0=0;MQRankSum=-0.622;QD=34.14;ReadPosRankSum=-0.047;VQSLOD=3.4297;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:72.23:0,72,892	0/0:4,0:4:12.04:0,12,149	0/0:11,0:10:30.09:0,30,363	0/0:17,0:17:48.13:0,48,573	0/0:27,0:27:78.24:0,78,967	0/0:19,0:19:54.16:0,54,657	0/0:10,0:10:27.05:0,27,308	0/0:31,0:31:79.56:0,80,1101	0/0:13,0:13:39.12:0,39,482	0/0:19,0:19:54.17:0,54,670	0/0:16,0:16:48.15:0,48,592	0/0:10,0:10:30.09:0,30,372	0/0:15,0:15:45.10:0,45,530	0/0:18,0:18:51.16:0,51,632	1/1:0,20:20:54.18:778,54,0	0/0:10,0:10:30.09:0,30,372	0/0:21,0:21:63.18:0,63,764	0/0:14,0:14:42.10:0,42,502	0/0:24,0:23:60.19:0,60,744	0/0:23,0:23:69.20:0,69,842	0/0:17,0:17:51.16:0,51,632	0/0:11,0:11:33.10:0,33,409	0/0:7,0:7:18.06:0,18,223	0/0:7,0:7:21.07:0,21,260	0/0:21,0:20:60.19:0,60,744	0/0:17,0:17:51.16:0,51,632	0/0:14,0:14:36.11:0,36,445	0/0:5,0:5:15.05:0,15,186
chr10	27365204	.	TC	T	445.47	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=4.592;DP=554;FS=8.050;HRun=1;HaplotypeScore=147.6492;InbreedingCoeff=0.5606;MQ=66.88;MQ0=0;MQRankSum=-0.877;QD=14.85;ReadPosRankSum=-3.095;VQSLOD=2.0336;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:9.89:0,10,358	0/0:8,0:8:24.05:0,24,301	0/1:9,0:9:7.84:8,0,130	0/0:15,0:13:2.72:0,3,202	0/0:29,0:29:54.21:0,54,499	0/0:23,0:23:60.19:0,60,817	0/0:9,0:9:21.04:0,21,273	0/0:32,0:32:92.39:0,92,693	0/0:15,0:15:18.69:0,19,267	0/0:30,0:30:89.38:0,89,671	0/0:21,0:21:56.23:0,56,372	0/0:20,0:20:54.13:0,54,712	0/0:39,0:39:99:0,99,1263	0/0:15,0:15:42.10:0,42,528	1/1:2,19:21:60.01:538,60,0	0/0:15,0:15:44.51:0,45,306	0/0:18,0:18:48.09:0,48,627	0/0:10,0:10:29.74:0,30,221	0/0:15,0:15:41.71:0,42,308	0/0:28,0:28:57.42:0,57,557	0/0:7,0:7:17.82:0,18,141	0/0:18,0:18:51.11:0,51,641	0/0:30,0:30:84.11:0,84,1051	0/0:9,0:9:26.87:0,27,275	0/0:26,0:26:11.93:0,12,394	0/0:25,0:25:71.58:0,72,601	0/0:29,0:29:38.69:0,39,472	0/0:15,0:15:38.24:0,38,287
chr10	27365205	.	C	CT	8640.76	PASS	AB=0.868;AC=32;AF=0.571;AN=56;BaseQRankSum=-6.624;DP=592;FS=4.198;HRun=9;HaplotypeScore=147.1557;InbreedingCoeff=0.7285;MQ=65.26;MQ0=0;MQRankSum=-5.006;QD=22.21;ReadPosRankSum=-2.086;VQSLOD=2.9838;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:9,14:22:54.09:572,54,0	0/0:8,0:8:17.99:0,18,156	0/1:8,0:9:15.80:16,0,77	0/1:14,1:13:2.87:3,0,70	1/1:3,26:29:75.19:816,75,0	0/0:23,0:23:53.98:0,54,469	0/0:9,0:9:17.99:0,18,156	1/1:13,21:35:77.99:820,78,0	1/1:8,12:20:45.06:460,45,0	1/1:12,22:34:75.16:805,75,0	1/1:2,20:22:57.15:630,57,0	0/0:21,0:21:50.95:0,51,436	0/0:40,0:40:80.95:0,81,702	0/0:16,0:16:32.98:0,33,286	0/0:21,0:21:35.39:0,35,105	1/1:4,14:18:48.96:506,49,0	0/0:18,0:18:38.98:0,39,339	1/1:5,8:13:30.05:315,30,0	1/1:7,10:18:38.93:405,39,0	1/1:11,17:29:62.97:652,63,0	0/1:3,4:7:11:118,0,11	0/0:17,0:17:38.98:0,39,338	0/0:30,0:30:62.94:0,63,547	0/1:8,1:9:18.19:18,0,89	1/1:9,18:27:69.13:735,69,0	1/1:10,17:27:8.03:531,8,0	1/1:18,19:38:66.73:836,67,0	1/1:3,13:16:16.06:405,16,0
chr10	27365233	.	AAAAC	A	13351.62	PASS	AB=1.000;AC=50;AF=0.893;AN=56;BaseQRankSum=-2.343;DP=614;FS=12.026;HRun=0;HaplotypeScore=176.0231;InbreedingCoeff=0.6263;MQ=63.73;MQ0=0;MQRankSum=-4.530;QD=23.26;ReadPosRankSum=3.163;VQSLOD=3.9848;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:16:18.89:218,19,0	0/1:6,0:6:15.04:15,0,57	0/0:22,0:19:41.53:0,42,639	0/0:18,0:14:19.25:0,19,272	1/1:32,1:33:88.82:639,89,0	1/1:1,22:23:51.09:877,51,0	1/1:0,12:12:23.87:451,24,0	1/1:33,0:33:85.26:581,85,0	1/1:23,0:23:60.07:487,60,0	1/1:28,1:29:69.34:521,69,0	1/1:24,0:24:58.12:382,58,0	1/1:1,23:24:51.08:884,51,0	1/1:2,32:34:71.69:1270,72,0	1/1:0,18:18:45.15:832,45,0	1/1:16,2:18:50.46:411,50,0	1/1:20,0:20:53.50:419,54,0	0/1:25,0:25:29.62:30,0,279	1/1:11,0:11:29.56:189,30,0	1/1:20,0:20:51.37:305,51,0	1/1:24,0:24:58.73:389,59,0	1/1:10,1:11:26.68:213,27,0	1/1:0,17:17:45.14:744,45,0	1/1:3,26:29:81.16:1378,81,0	1/1:1,11:12:17.68:296,18,0	1/1:27,1:28:76.95:568,77,0	1/1:32,0:32:76.01:491,76,0	1/1:37,0:37:88.34:587,88,0	1/1:15,0:15:27.96:172,28,0
chr10	27365234	.	AAAC	A	18796.53	PASS	AB=1.000;AC=50;AF=0.893;AN=56;BaseQRankSum=-4.864;DP=609;FS=7.536;HRun=0;HaplotypeScore=144.5228;InbreedingCoeff=0.6301;MQ=64.18;MQ0=0;MQRankSum=-5.028;QD=33.03;ReadPosRankSum=3.104;VQSLOD=5.4879;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,11:16:33.51:477,34,0	0/1:6,0:6:16.25:18,0,16	0/0:21,0:18:41.32:0,41,562	0/0:19,0:15:8.63:0,9,285	1/1:8,24:32:93.10:1326,93,0	1/1:22,0:22:51.03:508,51,0	1/1:12,0:12:24.01:260,24,0	1/1:7,26:33:93.23:1340,93,0	1/1:7,16:23:63.17:987,63,0	1/1:8,21:29:84.04:1183,84,0	1/1:4,19:23:64.73:798,65,0	1/1:24,0:24:44.83:491,45,0	1/1:34,0:34:67.98:704,68,0	1/1:18,0:18:45.09:463,45,0	1/1:3,15:18:54.12:815,54,0	1/1:5,15:20:53.53:824,54,0	0/1:25,0:25:8.62:9,0,129	1/1:2,9:11:30.10:509,30,0	1/1:1,19:20:57.08:886,57,0	1/1:5,18:23:63.12:957,63,0	1/1:3,8:11:27.03:380,27,0	1/1:17,0:17:41.74:377,42,0	1/1:27,2:29:80.37:852,80,0	1/1:11,0:11:17.99:173,18,0	1/1:3,25:28:81.19:1271,81,0	1/1:8,24:32:84.99:1232,85,0	1/1:5,32:37:90.73:1457,91,0	1/1:2,13:15:32.97:499,33,0
chr10	27365235	.	AAC	A	12296.93	PASS	AB=1.000;AC=52;AF=0.929;AN=56;BaseQRankSum=-1.246;DP=602;FS=0.000;HRun=0;HaplotypeScore=156.0860;InbreedingCoeff=0.4716;MQ=64.23;MQ0=0;MQRankSum=-3.830;QD=21.17;ReadPosRankSum=4.574;VQSLOD=5.1618;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:16:35.99:321,36,0	1/1:5,0:5:7.22:44,7,0	0/0:21,0:18:24.19:0,24,430	0/1:19,0:15:22.07:22,0,214	1/1:31,1:32:92.84:799,93,0	1/1:22,0:22:50.84:420,51,0	1/1:12,0:12:23.91:208,24,0	1/1:31,2:33:92.87:805,93,0	1/1:22,1:23:63.10:630,63,0	1/1:27,2:29:84.03:785,84,0	1/1:20,3:23:63.35:575,63,0	1/1:24,0:24:39.10:396,39,0	1/1:33,0:33:58.53:558,59,0	1/1:18,0:18:44.88:375,45,0	1/1:18,0:18:53.98:483,54,0	1/1:20,0:20:53.28:483,53,0	0/1:24,0:24:4.87:77,0,5	1/1:10,1:11:30.04:283,30,0	1/1:19,1:20:55.26:503,55,0	1/1:22,1:23:61.74:528,62,0	1/1:10,1:11:26.98:235,27,0	1/1:17,0:17:35.69:292,36,0	1/1:29,0:29:79.03:654,79,0	1/1:11,0:11:17.81:144,18,0	1/1:27,0:27:81.01:741,81,0	1/1:29,0:29:86.96:771,87,0	1/1:34,3:37:90.03:845,90,0	1/1:14,1:15:33.04:320,33,0
chr10	27365319	.	T	TC	639.67	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=1.039;DP=586;FS=4.861;HRun=2;HaplotypeScore=73.9476;InbreedingCoeff=0.9688;MQ=80.73;MQ0=0;MQRankSum=-2.871;QD=35.54;ReadPosRankSum=0.981;VQSLOD=4.2251;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:36.11:0,36,446	0/0:5,0:5:15.05:0,15,186	0/0:17,0:17:45.14:0,45,556	0/0:14,0:14:39.12:0,39,472	0/0:31,0:31:78.23:0,78,955	0/0:29,0:29:75.23:0,75,930	0/0:16,0:16:45.14:0,45,558	0/0:35,0:35:90.28:0,90,1116	0/0:20,0:20:57.16:0,57,692	0/0:25,0:25:69.18:0,69,839	0/0:17,0:17:48.15:0,48,595	0/0:18,0:18:36.11:0,36,446	0/0:29,0:29:78.23:0,78,954	0/0:26,0:26:66.21:0,66,818	1/1:1,17:18:51.17:735,51,0	0/0:24,0:24:63.20:0,63,781	0/0:20,0:20:57.18:0,57,707	0/0:11,0:11:33.10:0,33,409	0/0:16,0:16:45.14:0,45,558	0/0:31,0:31:75.23:0,75,930	0/0:19,0:19:54.17:0,54,669	0/0:23,0:23:51.16:0,51,632	0/0:20,0:20:51.16:0,51,632	0/0:24,0:24:60.19:0,60,744	0/0:26,0:26:75.24:0,75,930	0/0:22,0:22:57.09:0,57,672	0/0:27,0:27:66.19:0,66,818	0/0:9,0:9:15.05:0,15,186
chr10	27365866	.	TAAGGATCTGGG	T	16981.27	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=17.524;DP=640;FS=1.074;HRun=0;HaplotypeScore=223.3606;InbreedingCoeff=0.9867;MQ=83.88;MQ0=0;MQRankSum=-18.177;QD=93.82;ReadPosRankSum=2.091;VQSLOD=4.8531;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,123,6848	1/1:0,13:13:35.94:1341,36,0	0/0:25,0:25:75.26:0,75,3948	0/0:24,0:24:69.24:0,69,3710	0/0:32,0:32:96.33:0,96,5241	1/1:0,29:29:78.27:2901,78,0	1/1:0,17:17:51.18:1900,51,0	0/0:25,0:25:75.26:0,75,3984	0/0:33,0:33:99:0,99,5300	0/0:25,0:25:75.26:0,75,4132	0/0:26,0:26:78.24:0,78,4190	1/1:0,14:14:36.12:1341,36,0	1/1:0,23:23:57.20:2124,57,0	1/1:0,18:18:42.14:1544,42,0	0/0:16,0:16:48.16:0,48,2752	0/0:28,0:28:84.29:0,84,4603	1/1:0,15:15:36.12:1341,36,0	0/0:3,0:3:9.03:0,9,534	0/0:20,0:20:60.19:0,60,3067	0/0:39,0:39:99:0,117,6371	0/0:21,0:21:63.19:0,63,3521	1/1:0,30:30:78.27:2782,78,0	1/1:0,15:15:41.81:1405,42,0	1/1:0,7:7:12.04:301,12,0	0/0:32,0:32:96.33:0,96,5505	0/0:24,0:24:72.25:0,72,4173	0/0:33,0:32:99:0,99,5086	0/0:12,0:12:36.12:0,36,1935
chr10	27368711	.	CT	C	15534.33	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-2.072;DP=687;FS=11.679;HRun=8;HaplotypeScore=72.1366;InbreedingCoeff=0.8558;MQ=81.65;MQ0=0;MQRankSum=-7.579;QD=23.83;ReadPosRankSum=5.710;VQSLOD=4.5325;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,28:29:84.14:811,84,0	1/1:0,11:11:30.05:290,30,0	0/0:16,1:17:0.55:0,1,276	0/0:18,0:18:32.78:0,33,330	1/1:1,39:40:99:1023,108,0	1/1:3,22:25:63.10:608,63,0	1/1:3,19:22:45.07:435,45,0	1/1:7,22:29:66.08:632,66,0	1/1:2,17:19:48.07:463,48,0	1/1:2,21:23:63.10:608,63,0	1/1:3,32:35:90.13:868,90,0	1/1:4,18:22:48.06:463,48,0	1/1:2,26:28:66.10:636,66,0	1/1:5,26:31:63.10:608,63,0	1/1:3,23:26:60.09:579,60,0	1/1:3,24:27:69.11:666,69,0	1/1:1,20:21:54.09:521,54,0	1/1:3,19:22:39.05:376,39,0	1/1:2,15:17:45.07:435,45,0	1/1:2,24:26:72.12:695,72,0	1/1:0,19:19:51.08:492,51,0	1/1:3,27:30:78.12:753,78,0	1/1:0,26:26:66.10:637,66,0	1/1:4,18:22:51.08:492,51,0	1/1:4,26:30:69.11:666,69,0	1/1:3,25:28:78.05:731,78,0	1/1:2,35:37:87.14:840,87,0	1/1:0,7:7:21.03:203,21,0
chr10	27369273	.	CT	C	3460.11	PASS	AB=0.632;AC=51;AF=0.911;AN=56;BaseQRankSum=-2.883;DP=390;FS=16.832;HRun=13;HaplotypeScore=51.3762;InbreedingCoeff=0.6445;MQ=74.43;MQ0=2;MQRankSum=-0.422;QD=9.80;ReadPosRankSum=3.843;VQSLOD=1.0610;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,13:18:20.52:153,21,0	1/1:2,0:8:12.22:35,12,0	0/0:21,0:12:10.18:0,10,75	0/0:16,0:8:6:0,6,53	1/1:4,13:17:12.55:252,13,0	1/1:1,0:9:12.22:36,12,0	1/1:4,0:14:18.32:54,18,0	1/1:4,8:12:24.70:173,25,0	1/1:2,10:12:23.82:175,24,0	1/1:6,9:15:26.82:196,27,0	1/1:6,8:14:23.85:175,24,0	1/1:4,0:14:16.26:48,16,0	1/1:3,0:11:16.12:47,16,0	1/1:2,0:18:26.48:78,26,0	1/1:3,0:10:10.18:30,10,0	1/1:4,11:15:17.89:131,18,0	1/1:3,0:14:18.32:53,18,0	1/1:0,5:5:11.93:88,12,0	0/1:5,7:12:5.13:115,0,5	1/1:5,10:15:35.76:263,36,0	1/1:2,16:18:26.83:197,27,0	1/1:2,0:6:8.14:24,8,0	1/1:1,0:12:20.37:60,20,0	1/1:1,0:16:22.40:66,22,0	1/1:3,10:13:26.84:197,27,0	1/1:5,18:23:47.64:346,48,0	1/1:2,16:20:42.82:296,43,0	1/1:1,8:9:23.82:175,24,0
chr10	27370045	.	ATG	A	1624.55	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-1.551;DP=1130;FS=0.000;HRun=0;HaplotypeScore=217.5687;InbreedingCoeff=0.9884;MQ=55.24;MQ0=20;MQRankSum=4.621;QD=31.24;ReadPosRankSum=-1.612;VQSLOD=3.6964;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:47.77:0,48,830	0/0:16,0:16:39.13:0,39,675	0/0:48,0:13:21.18:0,21,397	0/0:48,0:16:18.97:0,19,436	0/0:28,0:28:51.17:0,51,876	0/0:38,0:38:90.29:0,90,1507	0/0:39,0:39:96.33:0,96,1630	0/0:58,0:53:99:0,122,1981	0/0:57,0:56:99:0,126,2066	0/0:52,0:52:99:0,148,2522	0/0:33,0:33:66.22:0,66,1123	0/0:48,0:48:99:0,132,2230	0/0:58,0:58:99:0,154,2559	0/0:40,0:40:96.24:0,96,1505	1/1:13,39:48:99:1719,132,0	0/0:60,0:60:99:0,172,2814	0/0:22,0:22:60.16:0,60,955	0/0:35,0:35:92.44:0,92,1497	0/0:32,0:28:81.18:0,81,1302	0/0:30,0:30:66.16:0,66,1128	0/0:86,0:83:99:0,219,3531	0/0:24,0:24:27.04:0,27,462	0/0:38,0:38:63.13:0,63,1045	0/0:39,0:39:86.55:0,87,1431	0/0:17,0:17:33.10:0,33,539	0/0:52,0:51:99:0,144,2356	0/0:31,0:31:69.21:0,69,1141	0/0:19,0:19:51.17:0,51,859
chr10	27370137	.	ATG	A	1313.04	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.845;DP=1195;FS=7.006;HRun=0;HaplotypeScore=241.9617;InbreedingCoeff=0.9955;MQ=55.29;MQ0=18;MQRankSum=2.736;QD=21.18;ReadPosRankSum=0.215;VQSLOD=2.4672;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:74.12:0,74,1225	0/0:11,0:11:20.73:0,21,303	0/0:35,0:17:35.24:0,35,467	0/0:33,0:19:51.73:0,52,748	0/0:31,0:31:84.29:0,84,1419	0/0:36,0:36:81.26:0,81,1336	0/0:49,0:49:71.66:0,72,1560	0/0:75,0:68:99:0,141,2241	0/0:63,0:62:99:0,156,2532	0/0:55,0:55:99:0,147,2418	0/0:32,0:32:93.29:0,93,1495	0/0:39,0:40:90.18:0,90,1468	0/0:62,0:62:99:0,147,2385	0/0:42,0:42:78.25:0,78,1286	1/1:6,56:62:99:1408,111,0	0/0:50,0:50:99:0,111,1835	0/0:37,0:37:83.73:0,84,1529	0/0:25,0:25:57.13:0,57,888	0/0:27,0:24:60.14:0,60,920	0/0:38,0:38:99:0,99,1637	0/0:101,1:100:99:0,248,3946	0/0:50,0:50:99:0,129,2144	0/0:32,0:32:81.26:0,81,1325	0/0:44,0:44:89.73:0,90,1431	0/0:17,0:17:48.15:0,48,783	0/0:49,0:46:99:0,126,2076	0/0:30,0:30:80.52:0,81,1327	0/0:17,0:17:42.14:0,42,714
chr10	27370490	.	T	TTC	429.22	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.331;DP=625;FS=13.985;HRun=0;HaplotypeScore=74.0320;InbreedingCoeff=0.9426;MQ=77.10;MQ0=0;MQRankSum=-0.566;QD=42.92;ReadPosRankSum=-0.033;VQSLOD=4.3015;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:78.22:0,78,1165	0/0:7,0:7:21.07:0,21,319	0/0:18,0:18:30.81:0,31,488	0/0:12,0:12:9.28:0,9,239	0/0:32,0:32:93.32:0,93,1419	0/0:29,0:29:84.29:0,84,1284	0/0:18,0:18:51.13:0,51,753	0/0:43,0:43:99:0,123,1771	0/0:22,0:22:66.22:0,66,999	0/0:40,0:40:99:0,111,1656	0/0:27,0:27:81.26:0,81,1219	0/0:22,0:22:66.22:0,66,1007	0/0:18,0:18:51.17:0,51,781	0/0:16,0:16:48.14:0,48,702	1/1:2,8:10:30.10:524,30,0	0/0:16,0:16:45.15:0,45,680	0/0:19,0:19:57.19:0,57,865	0/0:12,0:12:36.07:0,36,481	0/0:29,0:29:87.27:0,87,1296	0/0:41,0:41:99:0,117,1767	0/0:15,0:15:42.14:0,42,643	0/0:25,0:25:75.25:0,75,1143	0/0:19,0:19:51.17:0,51,762	0/0:13,0:13:30.10:0,30,459	0/0:26,0:26:72.22:0,72,1079	0/0:21,0:21:60.18:0,60,879	0/0:35,0:34:96.33:0,96,1459	0/0:12,0:12:35.97:0,36,451
chr10	27370492	.	G	GT	178.04	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.255;DP=626;FS=4.570;HRun=7;HaplotypeScore=61.8895;InbreedingCoeff=0.9776;MQ=77.08;MQ0=0;MQRankSum=-1.314;QD=16.19;ReadPosRankSum=-0.307;VQSLOD=3.4777;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:72.11:0,72,695	0/0:7,0:7:15.02:0,15,145	0/0:19,0:19:32.93:0,33,372	0/0:11,0:11:20.35:0,20,171	0/0:32,0:32:87.12:0,87,834	0/0:30,0:30:81.12:0,81,782	0/0:20,0:20:48.06:0,48,458	0/0:42,0:42:99:0,108,1035	0/0:22,0:23:59.11:0,59,552	0/0:39,0:39:96.13:0,96,920	0/0:27,0:27:78.12:0,78,753	0/0:22,0:22:63.06:0,63,599	0/0:18,0:18:51.07:0,51,487	0/0:16,0:16:39.06:0,39,377	1/1:3,8:11:27.05:272,27,0	0/0:15,0:15:42.05:0,42,399	0/0:19,0:19:51.08:0,51,493	0/0:12,0:12:33.05:0,33,318	0/0:30,0:30:78.08:0,78,741	0/0:42,0:42:99:0,117,1129	0/0:15,0:15:42.07:0,42,406	0/0:26,0:26:69.09:0,69,663	0/0:19,0:19:57.09:0,57,550	0/0:11,0:11:33.04:0,33,313	0/0:25,0:25:72.10:0,72,690	0/0:21,0:21:60.09:0,60,575	0/0:35,0:34:87.13:0,87,840	0/0:12,0:12:32.97:0,33,304
chr10	27370980	.	T	TGTG	35323.19	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-8.463;DP=673;FS=3.800;HRun=0;HaplotypeScore=78.7995;InbreedingCoeff=0.9971;MQ=82.37;MQ0=0;MQRankSum=-10.675;QD=56.16;ReadPosRankSum=6.052;VQSLOD=6.7018;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,28:30:69.24:1558,69,0	1/1:0,7:7:21.07:483,21,0	0/0:20,0:20:60.19:0,60,959	0/0:24,0:24:63.21:0,63,1053	1/1:1,25:26:66.18:1435,66,0	1/1:1,27:28:66.23:1516,66,0	1/1:4,26:31:69.24:1537,69,0	1/1:4,37:42:99:2497,117,0	1/1:1,19:20:48.16:1106,48,0	1/1:3,23:26:75.24:1659,75,0	1/1:0,17:18:39.03:844,39,0	1/1:1,28:29:66.23:1520,66,0	1/1:2,37:39:99:2381,105,0	1/1:0,26:27:72.25:1637,72,0	1/1:3,18:21:63.19:1338,63,0	1/1:4,27:32:75.26:1725,75,0	1/1:1,21:22:57.20:1308,57,0	1/1:2,11:13:33.11:754,33,0	1/1:2,22:24:72.25:1632,72,0	1/1:3,26:30:72.20:1577,72,0	1/1:0,17:17:36.12:755,36,0	1/1:4,13:18:45.11:973,45,0	1/1:1,21:23:54.03:1235,54,0	1/1:2,17:19:41.82:967,42,0	1/1:1,19:20:39.13:897,39,0	1/1:2,24:27:78.21:1575,78,0	1/1:2,26:27:78.27:1795,78,0	1/1:0,11:11:27.09:622,27,0
chr10	27371008	.	AC	A	760.51	PASS	AB=0.933;AC=3;AF=0.054;AN=56;BaseQRankSum=4.483;DP=613;FS=10.729;HRun=2;HaplotypeScore=131.4772;InbreedingCoeff=0.7468;MQ=79.64;MQ0=0;MQRankSum=-4.916;QD=20.55;ReadPosRankSum=2.740;VQSLOD=2.6763;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:69.19:0,69,971	0/0:5,0:5:15.05:0,15,225	0/0:20,0:20:57.04:0,57,776	0/1:13,1:14:1.51:2,0,418	0/0:29,0:28:78.12:0,78,1115	0/0:28,0:28:81.27:0,81,1213	0/0:21,0:21:54.15:0,54,767	0/0:32,0:32:93.30:0,93,1358	0/0:18,0:18:48.16:0,48,719	0/0:22,0:22:66.22:0,66,972	0/0:21,0:21:53.69:0,54,786	0/0:35,0:35:90.25:0,90,1321	0/0:37,0:37:99:0,99,1479	0/0:25,0:25:72.24:0,72,1069	1/1:0,23:23:66.21:855,66,0	0/0:29,0:29:84.27:0,84,1238	0/0:24,0:24:63.21:0,63,942	0/0:8,0:8:24.08:0,24,354	0/0:16,0:16:45.14:0,45,656	0/0:28,0:28:75.25:0,75,1122	0/0:20,0:20:54.15:0,54,767	0/0:15,0:15:42.14:0,42,627	0/0:23,0:23:57.19:0,57,851	0/0:21,0:21:57.15:0,57,829	0/0:21,0:20:51.17:0,51,763	0/0:24,0:24:69.23:0,69,1034	0/0:22,0:22:66.22:0,66,988	0/0:6,0:6:18.06:0,18,269
chr10	27371285	.	C	CCCCTCT	3743.89	PASS	AB=0.934;AC=45;AF=0.804;AN=56;BaseQRankSum=-3.904;DP=337;FS=5.654;HRun=0;HaplotypeScore=121.3586;InbreedingCoeff=0.1347;MQ=67.04;MQ0=1;MQRankSum=0.245;QD=11.56;ReadPosRankSum=-2.089;VQSLOD=1.7469;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,14:22:12.04:175,12,0	0/0:5,0:4:7.54:0,8,66	0/1:16,0:10:43.51:53,0,44	0/1:21,0:14:10.93:22,0,11	1/1:9,0:8:12.01:134,12,0	0/1:14,0:15:3.60:13,0,4	0/1:15,0:14:1.51:13,0,2	1/1:12,0:10:21.31:207,21,0	1/1:12,1:12:27.77:404,28,0	1/1:13,1:14:32.99:455,33,0	1/1:8,0:8:9.33:64,9,0	1/1:13,0:12:12.28:102,12,0	0/1:18,0:18:42.32:224,0,42	1/1:4,0:5:3.41:19,3,0	0/0:8,0:8:14.85:0,15,125	1/1:1,11:15:5.52:131,6,0	1/1:3,0:3:2.96:19,3,0	1/1:3,0:3:5.95:46,6,0	1/1:14,0:14:29.92:378,30,0	1/1:12,0:12:14.86:156,15,0	1/1:3,12:20:5.93:58,6,0	0/1:12,0:12:15.80:37,0,16	0/1:6,1:13:12.74:13,0,16	1/1:14,0:12:12.40:102,12,0	1/1:8,1:9:17.96:207,18,0	1/1:20,0:19:44.43:569,44,0	1/1:4,0:4:8.95:100,9,0	1/1:2,0:2:5.95:44,6,0
chr10	27371287	.	CA	C	977.88	PASS	AB=0.850;AC=18;AF=0.321;AN=56;BaseQRankSum=1.807;DP=292;FS=7.294;HRun=1;HaplotypeScore=93.1704;InbreedingCoeff=-0.3021;MQ=67.54;MQ0=1;MQRankSum=-1.516;QD=5.23;ReadPosRankSum=-1.621;VQSLOD=-0.3125;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:15,0:15:19.25:24,0,19	0/0:4,0:4:8.90:0,9,62	0/1:13,1:8:8.44:8,0,53	0/1:20,0:14:8.60:9,0,20	0/0:6,3:8:11.70:0,12,68	0/1:10,2:12:16.80:31,0,17	0/0:11,1:11:1.45:0,1,11	0/1:5,5:8:26.82:130,0,27	0/1:9,3:11:74.89:75,0,85	0/1:9,3:12:51.88:104,0,52	0/0:6,1:7:8.11:0,8,59	0/0:11,1:11:7.34:0,7,44	0/0:17,0:16:9.59:0,10,112	0/0:3,2:5:1.28:0,1,21	0/0:8,0:8:15.83:0,16,119	0/1:11,0:11:15.08:15,0,18	0/0:1,0:1:2.99:0,3,23	0/1:3,0:3:10.15:16,0,10	1/1:6,8:14:1.87:320,2,0	1/1:7,3:10:3.49:105,3,0	0/0:15,0:15:5.91:0,6,40	0/1:10,2:12:14.21:14,0,51	0/1:6,3:9:17.99:31,0,18	0/0:13,0:11:1.90:0,2,58	0/1:4,5:9:43.15:60,0,43	0/1:16,4:19:99:149,0,108	0/1:2,1:3:11.10:36,0,11	0/0:2,0:2:5.91:0,6,40
chr10	27371322	.	CTG	C	370.43	PASS	AB=0.963;AC=18;AF=0.375;AN=48;BaseQRankSum=2.456;DP=440;FS=0.000;HRun=0;HaplotypeScore=123.4519;InbreedingCoeff=0.1201;MQ=28.24;MQ0=14;MQRankSum=-2.371;QD=1.64;ReadPosRankSum=-0.823;VQSLOD=1.8475;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:23:1.55:2,0,52	0/0:4,0:4:3.48:0,3,12	./.	./.	0/0:22,0:18:2.78:0,3,58	0/0:20,0:17:0.37:0,0,1	1/1:24,0:20:2.80:14,3,0	0/1:18,1:16:13.68:14,0,366	0/0:11,0:9:11.40:0,11,178	0/1:8,1:8:35.79:36,0,262	0/0:18,1:14:2.87:0,3,58	0/1:17,0:17:3.64:81,0,4	1/1:19,0:18:19.90:231,20,0	1/1:13,0:13:2.84:24,3,0	0/1:13,0:11:0:0,0,0	0/0:22,0:12:8.67:0,9,132	0/1:7,1:8:9.47:39,0,9	0/0:6,0:5:2.51:0,3,57	0/0:20,0:18:23.66:0,24,685	0/0:18,1:13:6.01:0,6,115	./.	1/1:20,0:18:2.99:24,3,0	1/1:18,0:16:2.99:24,3,0	./.	0/0:17,0:17:2.88:0,3,58	0/1:26,1:24:6.68:7,0,803	0/1:13,0:7:6.45:6,0,79	0/0:6,0:3:2.98:0,3,21
chr10	27371324	.	GTC	G	755.65	PASS	AB=0.951;AC=20;AF=0.417;AN=48;BaseQRankSum=1.308;DP=455;FS=1.740;HRun=0;HaplotypeScore=123.7305;InbreedingCoeff=0.0824;MQ=28.01;MQ0=15;MQRankSum=-2.861;QD=2.93;ReadPosRankSum=-1.088;VQSLOD=2.2344;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:23:1.12:1,0,48	0/0:4,0:4:3.48:0,3,12	./.	./.	0/0:20,2:18:3.01:0,3,53	0/0:14,7:18:0.46:0,0,1	1/1:17,7:19:3:29,3,0	0/1:19,0:16:40.22:40,0,277	0/0:11,0:9:9.92:0,10,144	0/1:9,0:8:22.31:22,0,244	0/0:19,1:15:3.01:0,3,53	1/1:13,9:21:11.61:150,12,0	1/1:6,13:18:35.82:446,36,0	1/1:6,8:14:2.84:40,3,0	0/1:13,0:11:0:0,0,0	0/0:22,1:13:6.02:0,6,106	0/1:8,0:8:21.68:22,0,22	0/0:6,0:5:2.98:0,3,48	0/1:20,2:20:31.21:31,0,619	0/0:16,3:13:6.02:0,6,104	./.	1/1:7,13:18:2.73:41,3,0	1/1:10,8:16:3.01:41,3,0	./.	0/0:16,2:18:3.01:0,3,53	0/1:29,1:27:6.11:6,0,762	0/1:8,5:7:22.20:22,0,73	0/0:6,0:3:3.01:0,3,35
chr10	27371326	.	C	CTCTG	368.50	PASS	AB=0.965;AC=17;AF=0.354;AN=48;BaseQRankSum=1.549;DP=467;FS=1.734;HRun=0;HaplotypeScore=140.7324;InbreedingCoeff=-0.1446;MQ=27.85;MQ0=15;MQRankSum=-3.311;QD=1.59;ReadPosRankSum=-4.756;VQSLOD=0.7961;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,3:24:3.09:0,3,57	1/1:3,0:4:2.04:6,2,0	./.	./.	0/0:23,0:19:2.84:0,3,57	1/1:22,0:19:0.39:1,0,0	1/1:24,0:19:2.73:29,3,0	0/1:18,0:15:84.76:85,0,253	0/0:12,0:9:11.24:0,11,135	0/1:11,0:9:11.39:11,0,257	0/0:17,3:15:3.01:0,3,57	0/1:22,0:21:1.96:2,0,30	0/1:18,0:17:40.36:76,0,40	1/1:15,0:15:1.91:7,2,0	0/0:13,0:11:0:0,0,0	0/1:18,5:13:16.11:16,0,101	0/0:8,0:8:5.10:0,5,22	0/1:6,0:5:4.88:5,0,42	0/1:23,1:22:74.11:74,0,558	0/0:18,1:13:6.02:0,6,96	./.	0/0:21,0:19:2.74:0,3,12	0/0:18,0:16:2.74:0,3,12	./.	0/0:20,0:20:3.01:0,3,57	0/1:30,1:28:68.06:68,0,650	0/1:13,1:8:42.11:110,0,42	0/0:5,1:3:3.01:0,3,42
chr10	27371328	.	C	CTG	238.48	PASS	AB=0.972;AC=20;AF=0.435;AN=46;BaseQRankSum=1.214;DP=481;FS=0.809;HRun=0;HaplotypeScore=135.3920;InbreedingCoeff=-0.1322;MQ=27.71;MQ0=15;MQRankSum=-1.479;QD=0.83;ReadPosRankSum=-2.847;VQSLOD=1.7393;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:31,0:27:0.83:1,0,41	1/1:5,0:5:4.41:14,4,0	./.	./.	0/0:23,2:21:2.86:0,3,46	1/1:23,0:20:0.42:1,0,0	1/1:24,0:19:2.60:29,3,0	0/1:15,3:15:87.32:87,0,261	0/1:12,0:9:2.73:3,0,125	0/1:11,1:10:29.88:30,0,223	0/0:20,0:15:3.01:0,3,46	0/1:23,0:22:4.52:5,0,42	0/1:18,0:17:9.38:9,0,67	1/1:15,0:15:2.42:30,2,0	./.	0/1:25,0:14:9.97:10,0,83	1/1:7,1:8:4.33:15,4,0	0/0:5,1:5:3.57:0,4,47	0/1:27,1:25:42.99:43,0,616	0/0:15,1:10:6.02:0,6,91	./.	0/0:21,0:19:2.60:0,3,10	0/0:19,0:17:2.60:0,3,10	./.	0/0:17,3:19:2.99:0,3,46	0/1:31,1:29:79.55:80,0,648	0/1:15,0:9:6.43:6,0,70	0/0:6,0:3:2.90:0,3,16
chr10	27371342	.	GTC	G	455.66	PASS	AB=0.894;AC=22;AF=0.500;AN=44;BaseQRankSum=-0.232;DP=508;FS=1.380;HRun=0;HaplotypeScore=133.7295;InbreedingCoeff=0.1821;MQ=26.15;MQ0=22;MQRankSum=1.822;QD=1.57;ReadPosRankSum=2.537;VQSLOD=2.2954;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:29:2.35:0,2,8	0/0:3,0:4:3.48:0,3,12	./.	./.	./.	0/0:23,3:22:0.46:0,0,1	0/1:20,8:19:0:0,0,0	0/1:17,2:13:24.47:52,0,24	1/1:10,0:7:3.88:27,4,0	0/1:13,1:11:27.40:37,0,27	./.	1/1:14,9:22:10.56:76,11,0	0/1:15,3:17:29.99:30,0,38	1/1:15,2:17:2.48:15,2,0	0/0:12,0:10:2.68:0,3,11	0/0:25,0:14:6.98:0,7,30	0/0:9,0:10:2.92:0,3,17	1/1:6,0:5:5.60:28,6,0	0/1:28,0:26:46.36:53,0,46	1/1:17,1:12:2.94:19,3,0	./.	0/1:16,4:18:0:0,0,0	./.	0/1:14,2:14:0:0,0,0	0/1:23,1:21:0.02:0,0,0	1/1:33,0:29:10.04:149,10,0	1/1:16,1:12:9.56:92,10,0	0/0:8,0:5:2.04:0,2,6
chr10	27371350	.	C	CTG	422.38	PASS	AB=0.965;AC=15;AF=0.300;AN=50;BaseQRankSum=1.969;DP=538;FS=14.809;HRun=0;HaplotypeScore=151.4696;InbreedingCoeff=-0.0960;MQ=25.94;MQ0=24;MQRankSum=-0.645;QD=1.58;ReadPosRankSum=2.252;VQSLOD=1.9512;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,4:30:2.89:0,3,9	1/1:4,0:4:1.96:6,2,0	./.	./.	0/0:33,1:29:0:0,0,0	0/0:27,2:24:5.64:0,6,37	0/1:31,0:20:0.35:1,0,0	0/0:23,0:16:10.91:0,11,156	0/1:13,0:10:26.16:26,0,32	0/1:16,1:14:75.21:88,0,75	0/0:21,1:17:2.60:0,3,10	0/1:23,0:22:1.08:1,0,12	0/1:14,3:16:9.82:118,0,10	1/1:14,2:16:2.52:33,3,0	0/0:13,0:11:2.68:0,3,11	0/1:25,1:15:34.17:36,0,34	0/0:10,0:10:8.82:0,9,54	0/0:6,0:5:3.71:0,4,11	0/1:28,0:26:33.79:34,0,181	0/1:20,2:16:7.69:8,0,18	./.	0/0:20,1:19:0.47:0,0,1	0/0:25,2:25:2.68:0,3,12	0/1:16,1:14:0:0,0,0	0/0:25,1:22:0:0,0,0	0/1:35,0:30:94.79:95,0,152	0/1:18,0:12:62.20:94,0,62	0/0:8,0:5:3.01:0,3,37
chr10	27371352	.	C	CTG	1035.88	PASS	AB=0.986;AC=25;AF=0.500;AN=50;BaseQRankSum=-0.827;DP=532;FS=0.000;HRun=0;HaplotypeScore=147.3653;InbreedingCoeff=0.0900;MQ=25.75;MQ0=26;MQRankSum=0.667;QD=3.20;ReadPosRankSum=2.076;VQSLOD=2.6171;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:28:1.41:0,1,4	1/1:4,0:4:0.47:3,0,0	./.	./.	0/0:34,0:29:0:0,0,0	0/0:26,1:22:5.63:0,6,35	0/1:31,0:20:0.35:1,0,0	0/1:24,0:17:77.60:78,0,87	1/1:14,0:10:1.23:83,1,0	0/1:17,0:14:26.51:68,0,27	1/1:21,0:16:2.94:24,3,0	0/1:21,1:21:5.96:59,0,6	1/1:10,6:15:4.21:189,4,0	1/1:15,1:16:2.55:35,3,0	0/0:13,0:11:2.74:0,3,12	1/1:26,0:15:1.27:47,1,0	0/0:7,3:10:5.37:0,5,37	1/1:6,0:5:0.58:42,1,0	0/1:26,0:24:99:169,0,134	1/1:22,0:16:2.87:49,3,0	./.	0/0:19,2:19:0.47:0,0,1	1/1:26,1:25:2.59:17,3,0	0/1:17,1:15:0.20:0,0,0	0/0:26,0:22:0:0,0,0	0/1:34,0:29:83.62:291,0,84	0/0:19,0:13:16.71:0,17,75	0/0:8,0:5:2.37:0,2,8
chr10	27371362	.	CTCTCTG	C	638.78	PASS	AB=0.960;AC=30;AF=0.600;AN=50;BaseQRankSum=-0.953;DP=553;FS=7.380;HRun=0;HaplotypeScore=167.6464;InbreedingCoeff=-0.0763;MQ=26.09;MQ0=29;MQRankSum=1.395;QD=1.39;ReadPosRankSum=-0.160;VQSLOD=2.1317;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:27:1.89:0,2,7	0/0:4,1:5:3.79:0,4,18	./.	./.	1/1:37,0:32:2.99:23,3,0	0/0:25,3:23:1.50:0,1,4	1/1:32,0:21:1.74:5,2,0	0/1:24,0:17:12.26:12,0,140	0/1:16,0:12:8.33:8,0,17	0/1:15,0:13:37.40:40,0,37	1/1:23,0:18:2.77:23,3,0	0/1:16,6:21:6.67:148,0,7	0/1:15,1:15:25.28:117,0,25	1/1:12,3:15:2.52:67,3,0	0/1:13,0:11:0:0,0,0	1/1:27,0:16:3.04:62,3,0	0/0:12,0:12:6.73:0,7,37	1/1:7,0:6:6.32:26,6,0	0/1:23,0:21:47.38:47,0,83	1/1:22,0:16:3.44:10,3,0	./.	1/1:16,5:19:3:25,3,0	0/1:20,7:25:0:0,0,0	0/1:21,0:17:0.01:0,0,0	1/1:31,0:27:2.02:4,2,0	0/1:37,0:31:26.83:118,0,27	0/1:20,0:14:21.62:23,0,22	0/1:10,0:7:3.10:3,0,23
chr10	27371366	.	CTG	C	1415.42	PASS	AB=0.888;AC=37;AF=0.771;AN=48;BaseQRankSum=-0.388;DP=562;FS=3.892;HRun=0;HaplotypeScore=154.3330;InbreedingCoeff=-0.2098;MQ=26.61;MQ0=30;MQRankSum=0.715;QD=2.73;ReadPosRankSum=1.929;VQSLOD=2.4719;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:20,13:27:2.71:8,3,0	0/1:6,0:6:4.58:6,0,5	./.	./.	1/1:22,15:32:2.99:23,3,0	1/1:30,0:25:3.44:24,3,0	1/1:31,0:21:1.58:5,2,0	0/1:27,0:19:79.23:79,0,130	0/1:13,3:12:20.06:65,0,20	0/1:12,4:14:18.32:137,0,18	1/1:14,11:20:2.76:23,3,0	1/1:24,0:23:14.69:122,15,0	1/1:19,0:18:11.40:132,11,0	1/1:14,0:14:3.07:33,3,0	1/1:13,0:11:2.54:23,3,0	1/1:11,15:15:3.11:21,3,0	0/1:12,0:12:10.22:10,0,18	1/1:8,1:8:7.11:53,7,0	0/1:16,4:18:45.54:194,0,46	1/1:11,10:15:3.48:33,3,0	./.	0/1:23,0:21:0.93:20,0,1	./.	0/1:21,0:17:0.02:0,0,0	1/1:21,10:27:1.54:4,2,0	0/1:22,12:28:36.82:362,0,37	0/1:9,11:14:13.99:150,0,14	0/1:9,1:7:2.17:4,0,2
chr10	27371368	.	GTC	G	816.13	PASS	AB=0.976;AC=30;AF=0.625;AN=48;BaseQRankSum=1.469;DP=542;FS=10.785;HRun=0;HaplotypeScore=153.5392;InbreedingCoeff=-0.0445;MQ=26.93;MQ0=30;MQRankSum=0.254;QD=1.96;ReadPosRankSum=0.843;VQSLOD=1.9085;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:29,2:26:1.77:6,2,0	0/1:7,0:7:4.83:18,0,5	./.	./.	1/1:35,0:30:2.80:13,3,0	0/0:27,0:23:4.10:0,4,15	1/1:28,1:18:2.99:24,3,0	0/1:25,2:19:80.05:80,0,217	0/1:16,1:13:6.20:43,0,6	0/1:13,1:12:33.04:104,0,33	1/1:23,2:20:5.81:54,6,0	1/1:24,0:23:7.87:40,8,0	0/0:22,0:21:12.44:0,12,83	1/1:14,0:14:2.48:16,2,0	1/1:13,0:11:2.33:7,2,0	0/1:25,0:14:3.44:21,0,3	0/0:12,0:12:2.92:0,3,31	1/1:5,1:6:8.87:70,9,0	0/1:18,1:17:88.38:94,0,88	1/1:20,0:14:3.27:14,3,0	./.	0/0:22,0:20:3:0,3,28	./.	0/1:20,0:16:0.02:0,0,0	1/1:26,1:23:2.98:27,3,0	0/1:32,0:27:51.66:201,0,52	0/1:20,0:14:6.07:106,0,6	0/1:10,0:7:10.28:10,0,28
chr10	27371370	.	C	CTG	820.03	PASS	AB=0.922;AC=28;AF=0.560;AN=50;BaseQRankSum=0.256;DP=555;FS=13.145;HRun=0;HaplotypeScore=161.4771;InbreedingCoeff=-0.1306;MQ=27.54;MQ0=29;MQRankSum=-1.299;QD=1.94;ReadPosRankSum=1.192;VQSLOD=1.9130;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:24,7:26:2.41:18,2,0	1/1:7,0:7:4.76:16,5,0	./.	./.	0/0:34,4:33:1.82:0,2,6	0/1:28,0:23:2.38:2,0,7	1/1:28,0:18:2.92:42,3,0	0/1:29,0:21:40.99:41,0,238	0/1:13,6:14:14.85:89,0,15	0/1:12,2:12:76.46:83,0,76	1/1:22,4:21:5.77:59,6,0	0/1:24,0:23:9.65:10,0,28	0/0:20,0:19:17.76:0,18,143	1/1:14,0:14:2.70:22,3,0	0/0:13,0:11:2.37:0,2,8	0/1:22,4:15:33.38:46,0,33	0/1:12,0:12:10.41:10,0,30	0/1:9,0:8:5.32:21,0,5	0/1:15,3:16:61.74:62,0,93	1/1:20,4:18:2.69:12,3,0	1/1:13,0:8:2.99:24,3,0	0/0:22,0:20:5.67:0,6,38	./.	0/1:21,0:17:0.20:0,0,0	1/1:22,4:22:2.75:50,3,0	0/1:28,5:28:83.35:247,0,83	0/1:17,4:15:50.40:104,0,50	0/0:10,0:7:6.79:0,7,53
chr10	27371372	.	C	CTG	1489.68	PASS	AB=0.984;AC=30;AF=0.600;AN=50;BaseQRankSum=1.721;DP=569;FS=33.398;HRun=0;HaplotypeScore=149.9236;InbreedingCoeff=-0.0267;MQ=27.74;MQ0=30;MQRankSum=0.052;QD=3.41;ReadPosRankSum=1.267;VQSLOD=0.9523;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:29,2:26:1.68:7,2,0	1/1:6,1:7:4.38:14,4,0	./.	./.	0/0:34,4:33:1.82:0,2,5	0/1:29,0:24:2.44:2,0,7	1/1:28,0:18:2.02:5,2,0	0/1:35,0:25:99:147,0,216	1/1:18,1:14:17.27:129,17,0	0/1:14,0:12:36.68:170,0,37	1/1:25,0:20:4.06:28,4,0	0/1:25,0:24:10.36:12,0,10	0/1:19,0:18:20.73:21,0,70	1/1:15,0:15:2.69:21,3,0	0/0:12,0:10:2.74:0,3,12	1/1:27,0:16:5.10:30,5,0	0/1:12,0:12:11.68:14,0,12	1/1:9,0:8:4.51:74,5,0	0/1:15,1:14:67.53:135,0,68	0/1:25,0:19:7.53:44,0,8	0/0:13,0:8:1.82:0,2,5	0/0:20,0:18:5.69:0,6,41	./.	0/1:20,0:17:0.20:0,0,0	1/1:25,0:21:2.72:21,3,0	0/1:32,2:29:28.99:540,0,29	1/1:21,0:15:17.87:213,18,0	0/0:10,0:7:3.70:0,4,22
chr10	27371378	.	C	CTG	360.70	PASS	AB=0.959;AC=20;AF=0.385;AN=52;BaseQRankSum=-0.383;DP=594;FS=5.126;HRun=0;HaplotypeScore=155.3831;InbreedingCoeff=0.0945;MQ=28.70;MQ0=33;MQRankSum=2.267;QD=1.09;ReadPosRankSum=-4.612;VQSLOD=0.0693;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:30,5:30:5.36:44,5,0	0/0:7,1:8:3.67:0,4,17	./.	0/0:15,0:3:2.99:0,3,45	0/0:33,4:32:0.47:0,0,1	0/1:30,0:25:2.18:2,0,12	1/1:29,0:18:2.24:6,2,0	0/0:33,0:24:56.67:0,57,657	0/1:17,1:13:6.87:49,0,7	0/1:16,0:14:2.15:2,0,182	0/1:21,3:19:6.37:6,0,29	0/1:27,0:26:27.72:51,0,28	0/0:16,0:15:0.59:0,1,130	1/1:15,0:15:1.27:4,1,0	0/0:12,0:10:0.47:0,0,1	0/0:20,6:15:7.71:0,8,49	0/0:13,0:13:8.59:0,9,52	1/1:8,1:8:2.45:52,2,0	0/1:16,0:14:9.42:9,0,135	1/1:22,6:22:7.47:50,7,0	0/0:13,1:9:2.16:0,2,25	0/0:22,0:20:5.69:0,6,42	./.	0/0:20,0:16:2.74:0,3,18	1/1:26,2:24:9.90:65,10,0	0/1:31,5:31:99:138,0,231	0/1:20,1:15:19.06:19,0,130	0/0:11,0:7:6.40:0,6,41
chr10	27371384	.	CTG	C	2232.45	PASS	AB=0.931;AC=38;AF=0.704;AN=54;BaseQRankSum=-6.611;DP=627;FS=17.316;HRun=0;HaplotypeScore=149.0600;InbreedingCoeff=-0.3368;MQ=32.17;MQ0=34;MQRankSum=5.602;QD=3.59;ReadPosRankSum=-2.556;VQSLOD=1.5399;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:26,9:30:9.22:117,9,0	0/1:9,0:9:15.74:18,0,16	./.	0/1:25,0:5:2.37:2,0,65	1/1:30,6:31:6:69,6,0	0/1:32,0:27:5.92:59,0,6	1/1:21,0:10:2.54:41,3,0	0/1:34,0:26:15.22:15,0,433	1/1:11,8:14:9.23:138,9,0	0/1:15,3:16:99:191,0,101	1/1:20,7:22:14.30:126,14,0	0/1:28,0:27:5.01:75,0,5	0/1:16,0:15:3.16:111,0,3	1/1:14,0:14:1.78:6,2,0	1/1:12,0:10:3.47:26,3,0	0/1:28,0:17:15.30:45,0,15	0/1:15,0:15:20.91:41,0,21	0/1:5,5:9:70.03:75,0,70	0/1:18,3:19:36.25:260,0,36	1/1:26,5:25:4.30:107,4,0	0/1:12,2:10:8.79:56,0,9	1/1:24,0:22:7.20:69,7,0	1/1:35,0:34:8.98:72,9,0	0/1:17,0:14:0.02:0,0,0	1/1:20,9:25:17.96:217,18,0	0/1:32,7:34:99:292,0,136	0/1:15,6:15:99:101,0,102	0/1:12,0:7:7.93:44,0,8
chr10	27373077	.	TTTTG	T	2100.09	PASS	AB=0.994;AC=38;AF=0.679;AN=56;BaseQRankSum=-8.245;DP=398;FS=14.803;HRun=0;HaplotypeScore=80.1124;InbreedingCoeff=-0.3065;MQ=66.13;MQ0=12;MQRankSum=-1.074;QD=5.54;ReadPosRankSum=-3.679;VQSLOD=-0.3792;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:38,0:38:99:115,0,198	0/1:5,0:5:39.13:50,0,39	0/0:19,0:11:18.25:0,18,185	0/1:23,0:11:1.32:6,0,1	0/1:19,0:19:76.88:138,0,77	1/1:1,13:14:5.97:67,6,0	1/1:12,2:12:25.67:166,26,0	0/1:34,0:33:99:170,0,176	0/1:9,0:9:29.43:29,0,85	0/1:12,0:11:51.68:88,0,52	1/1:10,0:9:4.39:90,4,0	1/1:8,0:7:13.75:76,14,0	1/1:7,1:8:13.95:96,14,0	1/1:5,1:6:17.73:120,18,0	1/1:6,0:6:17.79:127,18,0	1/1:15,0:15:7.34:41,7,0	0/1:10,0:10:36.96:37,0,92	0/1:13,0:12:16.48:48,0,16	0/1:17,1:17:99:134,0,147	0/1:11,0:11:22.69:56,0,23	0/1:5,0:5:7.56:8,0,74	1/1:8,0:8:14.67:96,15,0	1/1:11,2:13:36.46:207,36,0	1/1:1,9:10:1.63:17,2,0	0/1:14,0:14:67.67:91,0,68	0/1:18,0:17:68.82:72,0,69	0/1:21,1:21:12.50:13,0,21	0/1:16,0:16:48.52:103,0,49
chr10	27373687	.	ATAAAT	A	4376	PASS	AC=16;AF=0.296;AN=54;BaseQRankSum=11.816;DP=390;FS=9.534;HRun=0;HaplotypeScore=73.5991;InbreedingCoeff=0.9299;MQ=59.53;MQ0=0;MQRankSum=-0.775;QD=46.55;ReadPosRankSum=2.974;VQSLOD=4.3345;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:39.13:0,39,1152	0/0:4,0:4:12.04:0,12,372	./.	0/0:3,0:3:6.01:0,6,79	0/0:20,0:20:60.21:0,60,1800	1/1:0,21:21:45.15:935,45,0	1/1:2,2:4:6.02:126,6,0	0/0:44,0:44:99:0,117,3428	0/0:15,0:15:45.15:0,45,1392	0/0:19,0:19:54.19:0,54,1621	0/0:19,0:19:54.17:0,54,1535	1/1:2,9:11:24:458,24,0	1/1:1,11:12:33.11:693,33,0	1/1:1,19:20:42.06:827,42,0	0/0:5,0:5:12.04:0,12,372	0/0:9,0:9:27.09:0,27,837	0/0:19,0:19:45.13:0,45,1269	0/0:18,0:18:51.16:0,51,1428	0/0:17,0:17:45.15:0,45,1394	0/0:17,0:17:48.16:0,48,1474	0/0:4,0:4:12.04:0,12,331	1/1:0,2:2:6.02:126,6,0	1/1:0,13:13:36.02:708,36,0	1/1:2,9:11:24.08:504,24,0	0/0:14,0:14:42.14:0,42,1276	0/0:27,0:27:78.25:0,78,2261	0/0:14,0:13:42.14:0,42,1286	0/0:12,0:12:33.11:0,33,1017
chr10	27373797	.	CTTTTT	C	1899.01	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-2.528;DP=464;FS=8.103;HRun=16;HaplotypeScore=100.3768;InbreedingCoeff=0.9003;MQ=53.87;MQ0=11;MQRankSum=-4.064;QD=19.18;ReadPosRankSum=3.147;VQSLOD=0.8293;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:29:66.66:0,67,827	0/0:13,0:14:22.64:0,23,197	0/0:29,0:9:16.22:0,16,217	0/0:14,0:3:2.60:0,3,10	0/0:20,0:24:60.51:0,61,821	1/1:3,4:7:4.30:133,4,0	1/1:4,5:10:14.48:194,14,0	0/0:34,0:42:89.60:0,90,1070	0/0:7,0:7:5.77:0,6,119	0/0:19,0:23:55.43:0,55,623	0/0:16,0:21:48.16:0,48,533	1/1:8,12:19:23.85:371,24,0	1/1:2,7:10:14.97:216,15,0	1/1:3,8:11:23.22:293,23,0	0/0:5,0:5:9.02:0,9,165	0/0:11,0:10:16.60:0,17,230	0/0:31,0:29:58.83:0,59,517	0/0:21,0:20:32:0,32,369	0/0:15,0:16:41.12:0,41,562	0/0:13,0:15:27.08:0,27,371	0/0:4,0:5:12.01:0,12,145	1/1:0,8:8:20.74:244,21,0	1/1:9,11:20:29.44:442,29,0	1/1:3,10:13:14.95:204,15,0	0/0:12,0:19:54.09:0,54,675	0/0:10,0:13:36.08:0,36,449	0/0:8,0:9:23.46:0,23,242	0/0:5,0:10:27.08:0,27,391
chr10	27373812	.	TTC	T	3639.52	PASS	AB=0.981;AC=41;AF=0.732;AN=56;BaseQRankSum=0.246;DP=485;FS=51.074;HRun=0;HaplotypeScore=75.4454;InbreedingCoeff=0.1178;MQ=48.04;MQ0=26;MQRankSum=-2.366;QD=8.14;ReadPosRankSum=3.225;VQSLOD=1.4301;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:34,2:30:3.48:294,0,3	1/1:9,1:10:23.28:174,23,0	1/1:30,0:6:0.01:53,0,0	0/0:16,0:2:2.90:0,3,18	1/1:23,1:23:7.37:163,7,0	0/0:8,0:8:3.14:0,3,20	0/1:12,0:11:16.71:17,0,23	0/1:34,3:35:3.05:359,0,3	1/1:10,0:10:10.28:55,10,0	1/1:25,1:25:11.50:288,12,0	1/1:19,1:20:3.37:200,3,0	0/1:18,0:17:3.29:3,0,71	0/1:13,0:13:21.20:21,0,24	0/1:12,0:12:5.27:42,0,5	0/1:7,0:6:2.67:5,0,3	1/1:10,0:7:13.58:93,14,0	1/1:25,11:34:70.49:597,70,0	1/1:14,3:16:8.80:181,9,0	0/1:19,1:18:22.24:139,0,22	1/1:8,7:13:8.96:85,9,0	1/1:5,0:5:14.03:92,14,0	1/1:8,0:8:11.55:66,12,0	0/1:15,0:14:13.98:61,0,14	0/0:14,0:13:12.84:0,13,74	1/1:20,0:19:2.39:179,2,0	1/1:17,2:19:15.73:171,16,0	1/1:15,1:15:19.20:128,19,0	1/1:11,0:10:18.84:174,19,0
chr10	27373814	.	CT	C	2461.19	PASS	AB=0.839;AC=31;AF=0.574;AN=54;BaseQRankSum=-6.613;DP=485;FS=15.341;HRun=16;HaplotypeScore=74.0453;InbreedingCoeff=0.5865;MQ=47.81;MQ0=26;MQRankSum=0.787;QD=7.79;ReadPosRankSum=-1.140;VQSLOD=0.9186;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:28,8:30:4.62:301,0,5	0/1:8,0:10:1.13:1,0,13	0/0:27,1:5:2.99:0,3,24	./.	1/1:8,17:24:20.58:180,21,0	0/0:8,0:8:14.85:0,15,117	0/1:11,1:11:3.28:3,0,111	1/1:25,11:35:41.18:317,41,0	1/1:4,6:10:2.92:26,3,0	1/1:9,17:25:47.32:388,47,0	0/1:12,8:19:3.90:151,0,4	0/0:18,0:17:34.29:0,34,240	0/0:12,0:13:2.97:0,3,149	0/0:12,0:12:18.54:0,19,112	1/1:5,2:6:8.87:67,9,0	1/1:8,3:8:8.81:73,9,0	0/0:35,0:34:21.03:0,21,76	1/1:13,4:16:19.39:145,19,0	1/1:11,8:17:10.62:201,11,0	1/1:14,1:13:9.82:79,10,0	1/1:4,1:5:8.82:74,9,0	0/0:8,0:8:8.77:0,9,50	0/0:15,0:14:20.84:0,21,146	0/0:15,0:14:20.94:0,21,183	0/1:13,7:19:10.44:140,0,10	1/1:6,13:19:37.64:293,38,0	1/1:6,10:15:8.57:58,9,0	1/1:4,7:10:17.65:152,18,0
chr10	27374985	.	T	TC	5555.12	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-5.707;DP=527;FS=58.084;HRun=0;HaplotypeScore=66.1280;InbreedingCoeff=0.9865;MQ=86.60;MQ0=0;MQRankSum=-6.213;QD=44.09;ReadPosRankSum=1.875;VQSLOD=0.2516;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:78.26:0,78,1091	1/1:0,9:9:21.07:336,21,0	0/0:20,0:20:58.99:0,59,763	0/0:17,0:17:51.17:0,51,701	0/0:23,0:23:69.22:0,69,949	1/1:0,7:7:21.07:335,21,0	1/1:0,7:7:18.06:288,18,0	0/0:20,0:20:54.17:0,54,726	0/0:16,0:16:48.16:0,48,671	0/0:30,0:30:87.29:0,87,1217	0/0:20,0:20:60.20:0,60,839	1/1:1,7:8:15.05:239,15,0	1/1:0,14:14:39.13:620,39,0	1/1:0,8:8:24.08:383,24,0	1/1:0,19:19:57.19:911,57,0	0/0:20,0:20:60.20:0,60,839	1/1:0,21:21:63.21:1007,63,0	0/0:12,0:12:33.09:0,33,461	0/0:26,0:26:78.25:0,78,1075	0/0:36,0:36:99:0,105,1467	0/0:30,0:30:90.30:0,90,1256	1/1:1,11:12:30.10:479,30,0	1/1:0,17:17:51.17:814,51,0	1/1:0,4:4:9.03:144,9,0	0/0:30,0:30:90.29:0,90,1243	0/0:23,0:23:66.21:0,66,908	0/0:40,0:39:99:0,120,1645	0/0:11,0:11:27.09:0,27,378
chr10	27375616	.	GAC	G	488.57	PASS	AB=0.987;AC=16;AF=0.286;AN=56;BaseQRankSum=3.170;DP=613;FS=20.610;HRun=0;HaplotypeScore=171.0995;InbreedingCoeff=0.0674;MQ=53.14;MQ0=8;MQRankSum=0.580;QD=1.68;ReadPosRankSum=2.118;VQSLOD=1.5468;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:31,0:30:11.88:12,0,74	1/1:5,8:13:21.06:239,21,0	0/0:23,0:17:2.98:0,3,21	0/0:27,0:16:2.48:0,2,28	0/0:17,0:16:1.46:0,1,5	0/1:25,1:28:35.08:35,0,208	0/1:21,0:21:13.30:13,0,158	0/1:25,0:22:0.56:1,0,186	0/0:17,0:17:7.71:0,8,52	0/1:23,0:23:2.79:3,0,202	0/0:18,0:18:0:0,0,0	0/1:22,0:22:7.88:8,0,173	0/1:29,1:30:1.44:1,0,235	0/0:20,0:20:14.20:0,14,147	0/0:23,0:23:35.58:0,36,485	0/0:16,0:16:4.83:0,5,50	1/1:20,7:27:11.91:265,12,0	0/0:12,0:12:3.01:0,3,44	0/1:10,0:9:21.08:21,0,52	0/1:19,0:19:11.65:12,0,57	0/0:29,0:28:10.26:0,10,96	0/0:25,1:26:35.88:0,36,329	0/0:22,1:23:17.38:0,17,182	0/0:33,0:33:27.15:0,27,264	1/1:18,0:18:2.68:20,3,0	0/0:21,0:21:8.68:0,9,281	0/0:18,0:18:5.34:0,5,220	0/1:22,0:23:3.16:3,0,105
chr10	27375652	.	GACACACACACACACAC	G	4513.42	PASS	AB=0.848;AC=29;AF=0.518;AN=56;BaseQRankSum=1.107;DP=591;FS=35.685;HRun=0;HaplotypeScore=247.7856;InbreedingCoeff=-0.0425;MQ=46.94;MQ0=13;MQRankSum=-0.431;QD=9.81;ReadPosRankSum=0.302;VQSLOD=2.6644;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:27:6.95:0,7,82	0/1:12,0:14:29.88:186,0,30	0/0:14,0:5:9.50:0,10,233	0/0:22,0:1:3.01:0,3,72	0/0:20,0:19:5.74:0,6,44	1/1:10,10:24:9.62:425,10,0	1/1:7,11:18:3.01:104,3,0	0/1:17,0:29:26.77:27,0,155	0/0:18,0:20:8.84:0,9,62	0/1:9,0:22:99:288,0,130	0/0:15,0:14:2.64:0,3,16	1/1:7,19:27:15.52:532,16,0	1/1:8,21:29:21.07:728,21,0	1/1:5,11:16:12.04:476,12,0	0/1:24,0:24:30.04:30,0,1073	0/1:16,0:16:11.60:12,0,40	1/1:21,0:22:24.61:294,25,0	0/0:10,0:11:9:0,9,111	0/1:11,0:12:99:154,0,115	0/1:19,0:21:75.97:166,0,76	0/1:24,0:25:39.48:39,0,108	1/1:13,9:23:12.04:476,12,0	0/1:11,12:23:0:0,0,0	0/1:12,15:26:99:129,0,191	1/1:17,0:19:2.74:12,3,0	0/1:22,0:22:99:179,0,498	0/1:20,0:21:99:237,0,223	0/1:16,0:19:19.74:20,0,35
chr10	27376098	.	T	TC	9566.66	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=15.629;DP=609;FS=0.309;HRun=1;HaplotypeScore=74.4161;InbreedingCoeff=0.9978;MQ=80.16;MQ0=0;MQRankSum=0.568;QD=40.71;ReadPosRankSum=5.343;VQSLOD=5.0366;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,108,1400	1/1:0,8:8:24.08:360,24,0	0/0:13,0:13:36.09:0,36,430	0/0:17,0:17:50.99:0,51,573	0/0:27,0:27:81.25:0,81,1035	1/1:0,29:29:81.27:1208,81,0	1/1:0,7:7:21.07:313,21,0	0/0:30,0:30:78.25:0,78,1001	0/0:34,0:34:93.29:0,93,1193	0/0:26,0:26:78.25:0,78,1013	0/0:29,0:29:87.27:0,87,1111	1/1:0,13:13:33.11:494,33,0	1/1:0,34:34:99:1481,99,0	1/1:3,19:23:60.20:889,60,0	1/1:2,23:25:63.18:920,63,0	0/0:17,0:17:51.16:0,51,649	1/1:2,25:27:72.24:1078,72,0	0/0:10,0:10:30.10:0,30,388	0/0:14,0:14:42.13:0,42,538	0/0:25,0:25:75.24:0,75,961	0/0:23,0:23:69.22:0,69,895	1/1:0,26:26:69.23:1027,69,0	1/1:0,18:18:54.18:809,54,0	1/1:1,24:25:66.19:988,66,0	0/0:25,0:25:75.19:0,75,953	0/0:20,0:20:60.19:0,60,767	0/0:22,0:21:63.14:0,63,766	0/0:6,0:6:18.06:0,18,231
chr10	27376767	.	A	AGT	15020.52	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-17.881;DP=718;FS=2.839;HRun=0;HaplotypeScore=79.6960;InbreedingCoeff=0.9996;MQ=77.89;MQ0=2;MQRankSum=-2.560;QD=52.89;ReadPosRankSum=3.689;VQSLOD=5.7029;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:87.28:0,87,1393	1/1:1,9:10:27.09:548,27,0	0/0:19,0:19:50.19:0,50,721	0/0:13,0:13:30.04:0,30,396	0/0:34,0:34:99:0,102,1662	1/1:1,30:31:78.27:1576,78,0	1/1:1,26:28:78.27:1574,78,0	0/0:38,0:38:99:0,111,1766	0/0:29,0:29:84.29:0,84,1366	0/0:33,0:33:96.33:0,96,1566	0/0:22,0:22:66.21:0,66,1052	1/1:2,27:29:78.27:1578,78,0	1/1:1,29:30:75.26:1517,75,0	1/1:0,20:22:60.21:1219,60,0	1/1:0,25:25:63.22:1280,63,0	0/0:35,0:35:99:0,105,1711	1/1:0,25:26:72.25:1463,72,0	0/0:12,0:12:33.11:0,33,538	0/0:27,0:27:81.28:0,81,1309	0/0:32,0:32:96.33:0,96,1566	0/0:29,0:29:84.29:0,84,1371	1/1:1,30:31:78.22:1522,78,0	1/1:0,16:16:41.89:853,42,0	1/1:0,34:34:93.32:1890,93,0	0/0:22,0:22:66.19:0,66,1027	0/0:21,0:21:63.22:0,63,1028	0/0:27,0:27:81.28:0,81,1322	0/0:10,0:10:27.56:0,28,441
chr10	27376977	.	TA	T	9816.09	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=14.689;DP=737;FS=4.117;HRun=2;HaplotypeScore=69.4635;InbreedingCoeff=1.0000;MQ=93.01;MQ0=0;MQRankSum=-9.040;QD=36.09;ReadPosRankSum=3.693;VQSLOD=5.5528;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:54.17:0,54,789	1/1:0,13:13:39.13:506,39,0	0/0:38,0:37:99:0,105,1510	0/0:30,0:30:84.28:0,84,1215	0/0:36,0:36:99:0,108,1617	1/1:1,23:24:69.22:896,69,0	1/1:0,30:30:84.27:1091,84,0	0/0:40,0:40:99:0,117,1736	0/0:31,0:31:93.30:0,93,1374	0/0:33,0:33:96.32:0,96,1421	0/0:28,0:28:78.26:0,78,1151	1/1:0,37:37:99:1324,102,0	1/1:0,31:31:87.28:1130,87,0	1/1:0,25:25:69.22:896,69,0	1/1:2,16:18:48.16:623,48,0	0/0:20,0:20:60.20:0,60,900	1/1:0,22:22:63.20:818,63,0	0/0:14,0:14:39.09:0,39,557	0/0:25,0:25:75.25:0,75,1124	0/0:32,0:32:96.33:0,96,1436	0/0:24,0:24:72.24:0,72,1079	1/1:1,25:26:75.24:974,75,0	1/1:0,27:27:78.25:1013,78,0	1/1:0,19:19:42.14:545,42,0	0/0:22,0:22:66.22:0,66,988	0/0:19,0:19:57.19:0,57,855	0/0:39,0:39:99:0,117,1713	0/0:16,0:16:48.16:0,48,719
chr10	27378435	.	T	TTGTG	4092.55	PASS	AB=1.000;AC=47;AF=0.870;AN=54;BaseQRankSum=-0.091;DP=544;FS=4.891;HRun=0;HaplotypeScore=139.2925;InbreedingCoeff=0.3775;MQ=59.36;MQ0=7;MQRankSum=2.478;QD=9.09;ReadPosRankSum=-1.236;VQSLOD=2.8126;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:33,0:30:3.01:48,3,0	1/1:4,2:6:6.02:143,6,0	0/0:33,0:25:3.01:0,3,45	0/0:26,0:17:3:0,3,41	1/1:25,0:25:5.89:110,6,0	1/1:22,0:22:18.04:276,18,0	1/1:19,0:19:2.59:50,3,0	1/1:28,0:28:15.46:172,15,0	1/1:16,0:14:3.01:52,3,0	1/1:16,0:15:12.04:217,12,0	1/1:13,0:12:3.01:69,3,0	1/1:16,0:16:3.01:50,3,0	1/1:12,0:12:6.02:101,6,0	1/1:18,0:18:6.02:101,6,0	0/0:7,0:18:26.25:0,26,231	1/1:15,0:20:15.05:262,15,0	1/1:14,19:35:41.40:843,41,0	1/1:18,0:19:12.04:206,12,0	1/1:19,0:19:6.45:73,6,0	1/1:21,0:19:3.01:44,3,0	0/1:15,0:15:0:0,0,0	1/1:13,0:13:3.01:50,3,0	1/1:12,0:12:3.01:52,3,0	./.	1/1:18,0:18:9.03:154,9,0	1/1:23,0:22:30.10:467,30,0	1/1:21,0:23:30.10:511,30,0	1/1:7,0:7:3.01:41,3,0
chr10	27378451	.	G	GTGTGTGTGTGTGTA	4757.62	PASS	AB=0.975;AC=29;AF=0.518;AN=56;BaseQRankSum=1.294;DP=581;FS=0.627;HRun=0;HaplotypeScore=179.6380;InbreedingCoeff=-0.1141;MQ=50.47;MQ0=16;MQRankSum=-2.213;QD=10.81;ReadPosRankSum=4.935;VQSLOD=3.7151;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:23:39.89:75,0,40	0/0:4,0:4:8.97:0,9,70	0/0:44,0:20:23.92:0,24,265	0/0:40,0:21:38.66:0,39,368	0/1:18,0:18:48.47:48,0,56	1/1:6,19:28:7.96:1081,8,0	1/1:8,14:25:3.01:204,3,0	0/0:23,0:23:36.39:0,36,265	0/0:17,0:14:11.94:0,12,92	0/1:19,0:18:98.45:98,0,190	0/1:14,0:13:38.88:52,0,39	0/1:8,10:21:12.13:198,0,12	1/1:6,7:15:8.60:418,9,0	1/1:7,8:20:6.02:408,6,0	0/1:19,0:18:29.39:29,0,785	0/1:20,0:20:15.16:321,0,15	0/1:36,0:35:3.28:3,0,371	0/1:16,0:16:80.66:469,0,81	0/1:21,0:21:99:165,0,215	0/1:21,0:19:1.73:2,0,98	0/0:13,0:13:5.64:0,6,46	1/1:3,16:24:2.90:204,3,0	1/1:3,0:22:5.95:117,6,0	1/1:13,0:13:9.01:431,9,0	0/1:15,0:15:15.94:68,0,16	0/1:19,0:18:57.72:58,0,184	0/1:21,0:21:85.85:306,0,86	0/1:7,0:7:1.25:1,0,96
chr10	27385216	.	TAAA	T	295.84	PASS	AC=2;AF=0.50;AN=4;BaseQRankSum=-2.180;DP=52;FS=7.160;HRun=13;HaplotypeScore=33.7465;MQ=66.73;MQ0=25;MQRankSum=-0.778;QD=19.72;ReadPosRankSum=1.713;VQSLOD=0.9640;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	0/0:5,0:5:5.33:0,5,115	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	1/1:2,13:14:30.06:365,30,0	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.
chr10	27387379	.	C	CA	7409.50	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-6.850;DP=625;FS=4.971;HRun=3;HaplotypeScore=125.2335;InbreedingCoeff=0.9992;MQ=91.35;MQ0=0;MQRankSum=-3.800;QD=38.39;ReadPosRankSum=4.290;VQSLOD=3.6011;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:69.20:0,69,816	0/0:11,0:11:30.09:0,30,360	0/0:35,0:35:81.18:0,81,919	0/0:22,0:22:48.14:0,48,566	0/0:31,0:31:90.28:0,90,1080	1/1:0,27:27:81.27:1134,81,0	1/1:0,9:9:24.08:336,24,0	0/0:37,0:37:99:0,111,1310	0/0:29,0:29:87.26:0,87,1038	0/0:30,0:30:81.25:0,81,970	0/0:22,0:22:63.19:0,63,756	1/1:3,24:27:72.24:1008,72,0	1/1:2,21:23:63.21:882,63,0	1/1:1,27:28:72.24:1007,72,0	1/1:0,16:16:45.15:630,45,0	0/0:24,0:24:72.22:0,72,864	0/0:14,0:14:36.09:0,36,420	0/0:12,0:12:27.04:0,27,320	0/0:28,0:28:75.22:0,75,889	0/0:26,0:26:75.23:0,75,898	0/0:12,0:12:36.11:0,36,432	1/1:2,16:18:42.10:563,42,0	1/1:0,24:24:69.23:966,69,0	1/1:0,21:21:63.21:882,63,0	0/0:22,0:22:63.16:0,63,732	0/0:25,0:25:66.20:0,66,791	0/0:18,0:18:51.16:0,51,612	0/0:9,0:9:27.08:0,27,324
chr10	27388655	.	CA	C	12471.40	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=7.610;DP=620;FS=0.550;HRun=9;HaplotypeScore=141.9818;InbreedingCoeff=0.9303;MQ=81.59;MQ0=1;MQRankSum=-6.514;QD=22.59;ReadPosRankSum=2.347;VQSLOD=3.3613;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,10:10:27.01:247,27,0	0/0:8,0:8:21.06:0,21,242	0/0:26,0:23:16.72:0,17,451	0/0:14,0:13:1.90:0,2,182	1/1:4,28:32:75.02:686,75,0	1/1:2,33:35:87.05:796,87,0	1/1:0,13:13:36.02:330,36,0	1/1:9,28:37:84.01:763,84,0	1/1:2,25:27:72.04:659,72,0	1/1:3,24:27:72.03:655,72,0	1/1:2,21:23:63.03:576,63,0	1/1:2,20:22:57.03:522,57,0	1/1:1,21:22:60.03:549,60,0	1/1:2,15:17:39.01:357,39,0	0/0:20,0:20:60.18:0,60,692	1/1:3,25:28:60.03:549,60,0	1/1:0,15:15:33.01:302,33,0	1/1:5,21:26:54.02:494,54,0	1/1:3,11:14:33.01:299,33,0	1/1:3,37:40:99:961,105,0	1/1:2,23:25:66.04:604,66,0	1/1:2,18:20:16.40:405,16,0	1/1:0,23:23:59.99:549,60,0	1/1:0,9:9:24.01:220,24,0	1/1:3,16:19:45.02:412,45,0	1/1:1,27:28:81.04:741,81,0	1/1:2,26:28:66.03:604,66,0	1/1:4,8:12:21.01:192,21,0
chr10	27389248	.	AAAG	A	19919.23	PASS	AB=0.929;AC=49;AF=0.875;AN=56;BaseQRankSum=5.432;DP=528;FS=6.225;HRun=0;HaplotypeScore=113.8313;InbreedingCoeff=0.8451;MQ=82.42;MQ0=0;MQRankSum=-8.314;QD=41.41;ReadPosRankSum=2.661;VQSLOD=6.0067;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,22:23:45.15:750,45,0	0/1:12,1:13:10.85:11,0,777	0/0:21,0:21:54.18:0,54,1099	0/0:13,0:13:30.10:0,30,625	1/1:2,25:27:63.17:1019,63,0	1/1:1,18:19:54.18:898,54,0	1/1:3,17:20:39.13:649,39,0	1/1:1,28:29:84.23:1318,84,0	1/1:1,16:17:42.14:698,42,0	1/1:1,20:21:60.19:974,60,0	1/1:2,26:28:72.25:1196,72,0	1/1:0,13:13:30.10:500,30,0	1/1:0,16:16:42.14:699,42,0	1/1:0,13:13:39.13:650,39,0	0/0:13,0:13:36.12:0,36,816	1/1:0,19:19:45.15:750,45,0	1/1:0,10:10:30.10:499,30,0	1/1:0,5:5:15.05:250,15,0	1/1:1,22:23:66.21:1073,66,0	1/1:1,35:36:90.31:1499,90,0	1/1:0,12:12:30.10:500,30,0	1/1:0,16:16:39.13:650,39,0	1/1:1,22:23:59.93:999,60,0	1/1:0,12:12:33.11:549,33,0	1/1:1,23:24:66.23:1098,66,0	1/1:3,19:22:57.19:949,57,0	1/1:1,30:31:78.27:1292,78,0	1/1:0,9:9:27.09:450,27,0
chr10	27389783	.	TC	T	24457.12	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=9.849;DP=712;FS=3.743;HRun=1;HaplotypeScore=126.5148;InbreedingCoeff=0.9711;MQ=86.88;MQ0=0;MQRankSum=-9.058;QD=39.32;ReadPosRankSum=4.396;VQSLOD=4.4028;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,27:27:75.25:1049,75,0	0/0:9,0:9:27.09:0,27,432	0/0:29,0:29:81.22:0,81,1249	0/0:19,0:19:57.17:0,57,885	1/1:0,31:31:93.31:1301,93,0	1/1:0,22:22:60.20:839,60,0	1/1:0,19:19:54.18:755,54,0	1/1:0,24:24:72.21:971,72,0	1/1:0,37:37:99:1549,111,0	1/1:0,35:35:99:1452,105,0	1/1:0,28:28:75.25:1049,75,0	1/1:0,27:27:72.24:1006,72,0	1/1:0,34:34:93.31:1300,93,0	1/1:0,31:31:84.28:1174,84,0	0/0:33,0:33:99:0,99,1583	1/1:0,38:38:99:1469,105,0	1/1:0,25:25:66.22:923,66,0	1/1:0,13:13:33.11:461,33,0	1/1:0,20:20:57.18:782,57,0	1/1:1,37:38:99:1495,108,0	1/1:0,23:23:63.21:881,63,0	1/1:0,19:19:54.18:755,54,0	1/1:0,22:22:63.21:881,63,0	1/1:0,24:24:66.22:923,66,0	1/1:0,28:28:81.27:1133,81,0	1/1:0,31:31:93.31:1301,93,0	1/1:0,24:24:66.22:923,66,0	1/1:0,2:2:6.02:84,6,0
chr10	27390902	.	TA	T	12593.18	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-0.254;DP=582;FS=2.080;HRun=8;HaplotypeScore=61.3500;InbreedingCoeff=0.9856;MQ=69.38;MQ0=0;MQRankSum=0.089;QD=23.99;ReadPosRankSum=2.750;VQSLOD=5.6952;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,20:22:48.07:463,48,0	0/0:7,0:7:21.06:0,21,254	0/0:18,0:16:16.03:0,16,237	0/0:9,0:8:11.97:0,12,115	1/1:2,30:32:84.06:800,84,0	1/1:4,31:35:87.14:840,87,0	1/1:7,10:17:27.03:261,27,0	1/1:4,26:30:72.04:679,72,0	1/1:1,18:19:51.08:492,51,0	1/1:1,21:22:63.05:594,63,0	1/1:3,23:26:60:567,60,0	1/1:1,16:17:48.08:463,48,0	1/1:1,20:21:51.08:492,51,0	1/1:1,16:17:45.07:434,45,0	0/0:23,0:23:60.17:0,60,715	1/1:0,14:14:39.06:377,39,0	1/1:5,16:21:39.06:377,39,0	1/1:2,15:17:42.01:396,42,0	1/1:0,9:9:27.04:257,27,0	1/1:1,34:35:93.10:889,93,0	1/1:1,12:13:33.05:319,33,0	1/1:0,15:15:42.02:396,42,0	1/1:1,24:25:65.91:637,66,0	1/1:0,15:15:45.07:434,45,0	1/1:0,19:19:54.09:521,54,0	1/1:4,29:33:87.12:833,87,0	1/1:3,30:33:81.13:782,81,0	1/1:5,13:18:30.05:290,30,0
chr10	27392965	.	AGTGCGTGTGT	A	5301.78	PASS	AB=1.000;AC=41;AF=0.732;AN=56;BaseQRankSum=5.201;DP=385;FS=9.152;HRun=0;HaplotypeScore=172.9338;InbreedingCoeff=0.2667;MQ=63.25;MQ0=2;MQRankSum=-3.808;QD=17.27;ReadPosRankSum=3.898;VQSLOD=2.9964;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:29:23.93:293,24,0	0/0:3,0:3:6.02:0,6,98	0/0:28,0:21:32.34:0,32,1087	0/0:30,0:20:50.06:0,50,1333	1/1:19,2:21:27:310,27,0	0/1:15,0:15:54.17:68,0,54	0/1:10,0:10:53.41:53,0,54	1/1:3,21:23:55.33:741,55,0	1/1:10,1:12:16.08:312,16,0	1/1:6,0:6:15.03:226,15,0	1/1:12,0:12:3.01:50,3,0	0/1:11,0:11:42.41:42,0,55	0/1:8,0:8:34.62:45,0,35	0/1:18,0:18:47.23:70,0,47	0/0:17,0:17:26.48:0,26,260	1/1:4,0:4:12:130,12,0	1/1:10,0:10:24.04:344,24,0	1/1:9,0:9:24:289,24,0	1/1:10,0:10:27.07:383,27,0	1/1:1,9:10:0.47:1,0,0	1/1:9,0:9:9:100,9,0	0/1:7,0:7:34.37:34,0,40	1/1:7,0:7:5.44:45,5,0	0/1:18,0:18:15.50:39,0,16	1/1:16,0:16:18.02:277,18,0	1/1:25,0:25:69.10:961,69,0	1/1:14,0:14:36.03:461,36,0	1/1:2,0:2:3:25,3,0
chr10	27392967	.	TGC	T	3393.71	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=5.830;DP=375;FS=3.123;HRun=0;HaplotypeScore=133.7842;InbreedingCoeff=0.7737;MQ=60.61;MQ0=4;MQRankSum=-1.863;QD=11.87;ReadPosRankSum=3.219;VQSLOD=3.7183;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:27,1:28:23.87:186,24,0	0/0:3,0:3:6.01:0,6,67	0/0:28,0:20:24.17:0,24,621	0/0:31,0:19:30.32:0,30,621	1/1:21,0:21:20.95:171,21,0	1/1:14,1:15:29.89:237,30,0	1/1:10,0:10:20.62:153,21,0	1/1:24,0:23:35.53:228,36,0	1/1:11,1:12:9.34:76,9,0	1/1:5,0:5:14.94:124,15,0	1/1:10,1:11:0.47:1,0,0	1/1:11,0:11:26.98:185,27,0	1/1:8,0:8:17.46:134,17,0	1/1:16,1:17:20.72:162,21,0	0/0:17,0:17:26.69:0,27,212	1/1:4,0:4:9.82:68,10,0	1/1:7,2:9:23.75:173,24,0	1/1:9,0:9:23.24:162,23,0	1/1:9,0:9:26.81:202,27,0	0/0:9,1:10:0:0,0,0	1/1:9,0:9:4.35:27,4,0	1/1:7,0:7:14.94:117,15,0	1/1:7,0:7:8.99:76,9,0	1/1:16,0:16:11.95:95,12,0	1/1:16,0:16:17.98:149,18,0	1/1:22,1:23:55.24:428,55,0	1/1:12,1:13:26.76:214,27,0	1/1:2,0:2:2.99:24,3,0
chr10	27392983	.	TGAGTGC	T	3859.63	PASS	AB=0.957;AC=46;AF=0.852;AN=54;BaseQRankSum=3.980;DP=366;FS=27.132;HRun=0;HaplotypeScore=130.3005;InbreedingCoeff=0.2337;MQ=38.14;MQ0=8;MQRankSum=1.379;QD=11.56;ReadPosRankSum=4.944;VQSLOD=0.8466;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:26,1:25:8.78:76,9,0	1/1:2,0:2:3:25,3,0	0/1:18,0:11:63.30:63,0,106	0/0:20,0:8:24.03:0,24,329	1/1:17,1:18:7.93:140,8,0	1/1:16,1:17:21.02:235,21,0	0/1:14,1:14:14.07:116,0,14	0/1:32,0:31:99:331,0,252	1/1:13,1:13:15.43:172,15,0	1/1:7,0:6:7.56:147,8,0	1/1:10,1:11:3:25,3,0	1/1:10,2:12:23.69:289,24,0	1/1:12,1:13:11.68:162,12,0	1/1:13,3:16:29.91:326,30,0	1/1:0,8:8:0.47:1,0,0	1/1:4,0:4:3.01:37,3,0	1/1:6,2:8:12.93:190,13,0	1/1:7,0:8:13.84:140,14,0	1/1:9,0:7:9.22:227,9,0	0/0:10,1:11:0.47:0,0,1	0/1:7,1:7:0:0,0,0	1/1:7,0:7:6.02:100,6,0	1/1:10,1:11:12.01:147,12,0	1/1:15,2:16:2.76:46,3,0	1/1:16,0:16:6.02:99,6,0	1/1:20,2:22:45.62:567,46,0	1/1:13,1:14:17.96:197,18,0	./.
chr10	27392987	.	TGC	T	1695.61	PASS	AB=1.000;AC=40;AF=0.833;AN=48;BaseQRankSum=5.139;DP=354;FS=21.863;HRun=0;HaplotypeScore=116.2088;InbreedingCoeff=0.0879;MQ=35.77;MQ0=8;MQRankSum=1.233;QD=5.49;ReadPosRankSum=3.297;VQSLOD=1.4374;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:25:8.47:59,8,0	1/1:2,0:2:1.25:3,1,0	0/1:14,0:7:44.89:48,0,45	0/0:17,0:6:14.94:0,15,126	1/1:15,2:17:8.98:73,9,0	1/1:18,0:18:17.93:142,18,0	1/1:11,3:13:10.59:68,11,0	0/1:29,0:28:99:133,0,213	1/1:15,1:15:10.58:58,11,0	0/1:10,0:9:4.41:108,0,4	./.	1/1:14,0:13:23.79:174,24,0	1/1:13,0:13:8.93:68,9,0	1/1:14,0:14:16.68:127,17,0	0/1:8,0:8:0:0,0,0	1/1:3,0:3:2.94:18,3,0	0/1:8,0:8:1.68:56,0,2	1/1:7,1:8:0.24:90,0,0	0/1:12,0:10:18.18:106,0,18	./.	./.	1/1:8,0:8:5.99:50,6,0	1/1:10,1:11:5.99:51,6,0	1/1:16,0:15:2.98:23,3,0	1/1:15,0:15:5.99:48,6,0	1/1:20,0:20:9.10:234,9,0	1/1:12,0:12:11.82:79,12,0	./.
chr10	27393031	.	TGC	T	113.84	PASS	AB=0.970;AC=12;AF=0.273;AN=44;BaseQRankSum=1.802;DP=340;FS=0.000;HRun=0;HaplotypeScore=119.5685;InbreedingCoeff=-0.0269;MQ=30.04;MQ0=9;MQRankSum=-1.245;QD=0.81;ReadPosRankSum=0.884;VQSLOD=1.6940;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,2:24:1.25:0,1,3	./.	0/0:5,0:1:2.96:0,3,19	./.	./.	0/0:15,0:15:4.35:0,4,27	1/1:17,0:16:4.11:13,4,0	0/1:12,2:12:67.52:68,0,229	0/0:18,0:17:0.77:0,1,2	0/0:16,0:14:13.45:0,13,404	./.	0/1:16,0:14:0:0,0,0	0/0:15,0:15:12.77:0,13,129	0/1:10,0:10:6.96:12,0,7	0/0:7,0:7:0.89:0,1,2	0/0:7,0:6:2.91:0,3,42	0/0:13,0:13:4.94:0,5,93	0/1:8,0:8:3.28:3,0,72	0/1:13,2:12:78.19:78,0,221	0/0:10,0:10:2.25:0,2,8	0/1:10,0:9:0:0,0,0	0/1:11,0:11:0:0,0,0	./.	./.	0/1:16,1:17:5.56:6,0,86	0/1:18,0:18:19.95:20,0,220	0/0:14,0:14:4.62:0,5,122	0/1:4,0:4:20.41:20,0,80
chr10	27393039	.	TGA	T	259.07	PASS	AB=0.974;AC=17;AF=0.340;AN=50;BaseQRankSum=1.010;DP=372;FS=7.201;HRun=0;HaplotypeScore=128.2267;InbreedingCoeff=0.0084;MQ=31.61;MQ0=10;MQRankSum=0.115;QD=1.25;ReadPosRankSum=-0.726;VQSLOD=1.3432;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:24:0.75:0,1,2	./.	0/0:5,0:1:3.01:0,3,57	./.	0/1:8,2:10:2.57:7,0,3	0/0:17,0:17:3.39:0,3,8	1/1:17,0:15:5.40:26,5,0	0/0:15,0:11:8.03:0,8,170	0/0:17,0:17:0.93:0,1,3	0/0:16,0:15:12.42:0,12,160	0/1:14,0:11:0:0,0,0	0/0:17,0:15:0.34:0,0,1	0/1:18,0:18:16.62:17,0,33	1/1:10,0:10:7.09:51,7,0	0/0:7,0:7:2.90:0,3,16	0/0:8,0:7:2.12:0,2,7	0/1:16,1:17:19.90:61,0,20	0/1:10,0:10:5.68:11,0,6	0/1:18,0:15:20.66:21,0,143	0/0:10,0:10:2.38:0,2,6	0/1:10,0:9:0:0,0,0	0/1:13,0:13:0:0,0,0	0/1:14,0:14:0.01:0,0,0	./.	0/1:20,0:20:3.08:80,0,3	0/1:14,2:16:71.50:76,0,72	0/1:16,0:16:5.50:6,0,49	0/1:4,0:4:20.08:21,0,20
chr10	27395649	.	GATA	G	15589.92	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=6.255;DP=477;FS=7.730;HRun=0;HaplotypeScore=104.2984;InbreedingCoeff=0.9341;MQ=62.71;MQ0=0;MQRankSum=-4.336;QD=34.34;ReadPosRankSum=2.913;VQSLOD=5.2336;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,11:13:27.09:414,27,0	1/1:3,9:12:15.05:230,15,0	0/0:6,0:6:15.05:0,15,307	0/0:4,0:4:9.03:0,9,162	1/1:5,35:40:99:1481,99,0	1/1:4,19:23:57.19:874,57,0	1/1:2,5:7:15.05:230,15,0	1/1:10,23:33:63.16:938,63,0	1/1:0,13:13:30.10:460,30,0	1/1:4,14:18:45.15:689,45,0	1/1:5,22:27:60.20:920,60,0	1/1:0,15:15:33.11:506,33,0	1/1:2,22:24:57.19:874,57,0	1/1:2,13:15:36.12:552,36,0	0/0:13,0:13:39.13:0,39,832	1/1:1,20:21:57.19:874,57,0	1/1:3,12:15:27.09:414,27,0	1/1:1,16:17:45.15:690,45,0	1/1:3,8:11:24.08:368,24,0	1/1:5,21:26:57.19:863,57,0	1/1:3,11:14:33.11:506,33,0	1/1:3,6:9:15.05:230,15,0	1/1:3,13:16:33.11:506,33,0	1/1:1,4:5:9.03:138,9,0	1/1:6,14:20:33.11:506,33,0	1/1:3,20:23:60.20:917,60,0	1/1:4,24:28:66.22:998,66,0	1/1:0,9:9:27.09:414,27,0
chr10	27396396	.	T	TA	803.17	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-7.483;DP=583;FS=3.723;HRun=8;HaplotypeScore=55.3497;InbreedingCoeff=0.9792;MQ=81.56;MQ0=0;MQRankSum=-2.577;QD=28.68;ReadPosRankSum=0.221;VQSLOD=3.9670;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:26:71.07:0,71,638	0/0:8,0:8:24.01:0,24,220	0/0:20,0:21:48.02:0,48,439	0/0:9,0:9:14.60:0,15,125	0/0:32,0:31:84.04:0,84,769	0/0:27,0:27:66.03:0,66,604	0/0:13,0:13:36.02:0,36,329	0/0:25,0:25:57.03:0,57,522	0/0:23,0:23:66.04:0,66,604	0/0:28,0:28:63.02:0,63,577	0/0:18,0:18:51.02:0,51,467	0/0:18,0:18:42:0,42,384	0/0:15,0:15:32.99:0,33,297	0/0:23,0:23:57.03:0,57,522	1/1:2,26:28:78.23:898,78,0	0/0:23,0:23:60.02:0,60,549	0/0:12,0:12:36.02:0,36,329	0/0:21,0:21:60.03:0,60,549	0/0:26,0:26:53.99:0,54,490	0/0:27,0:27:66.02:0,66,604	0/0:10,0:10:27.01:0,27,247	0/0:20,0:20:57.03:0,57,522	0/0:23,0:23:63.03:0,63,576	0/0:25,0:25:66.02:0,66,598	0/0:20,0:20:54.02:0,54,494	0/0:25,0:25:72.04:0,72,658	0/0:24,0:24:60.03:0,60,549	0/0:13,0:13:36.02:0,36,330
chr10	27398478	.	CA	C	974.18	PASS	AB=0.929;AC=39;AF=0.929;AN=42;BaseQRankSum=-4.619;DP=110;FS=48.591;HRun=1;HaplotypeScore=28.4095;InbreedingCoeff=0.1664;MQ=129.34;MQ0=5;MQRankSum=-4.110;QD=11.88;ReadPosRankSum=-1.257;VQSLOD=-0.7413;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,0:2:5.99:49,6,0	1/1:1,0:1:2.97:20,3,0	0/1:23,2:15:20.35:20,0,117	0/0:26,1:19:15.94:0,16,102	1/1:5,0:5:6:52,6,0	1/1:2,0:2:2.80:13,3,0	1/1:4,0:4:11.98:101,12,0	1/1:5,0:5:6.48:56,6,0	1/1:2,0:1:3:26,3,0	./.	./.	1/1:3,0:3:8.97:74,9,0	./.	1/1:5,0:4:11.92:89,12,0	1/1:2,0:2:3.89:29,4,0	1/1:4,0:4:8.79:77,9,0	1/1:3,0:3:5.96:46,6,0	1/1:2,0:2:6:52,6,0	1/1:3,3:6:16.52:127,17,0	1/1:1,0:1:3:27,3,0	1/1:3,0:3:8.99:75,9,0	./.	./.	1/1:2,0:2:6:52,6,0	1/1:1,0:1:3:27,3,0	./.	1/1:3,0:3:8.96:69,9,0	./.
chr10	27399847	.	C	CATGTGTGTGTGTGTGTGTAT	1040.44	PASS	AC=2;AF=0.037;AN=54;BaseQRankSum=-3.447;DP=596;FS=2.032;HRun=0;HaplotypeScore=286.7958;InbreedingCoeff=0.8262;MQ=62.67;MQ0=2;MQRankSum=-3.410;QD=38.53;ReadPosRankSum=0.400;VQSLOD=2.3524;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:51.13:0,51,2255	0/0:5,0:5:9.03:0,9,489	0/0:12,0:7:6.01:0,6,112	./.	0/0:36,0:36:87.30:0,87,4161	0/0:25,0:25:63.22:0,63,3094	0/0:15,0:15:45.09:0,45,1655	0/0:22,0:22:48.15:0,48,1438	0/0:12,0:12:27.09:0,27,1239	0/0:33,0:33:90.29:0,90,4377	0/0:18,0:18:39.13:0,39,1535	0/0:17,0:17:51.14:0,51,2050	0/0:18,0:18:48.16:0,48,2464	0/0:28,0:28:66.23:0,66,3421	1/1:11,12:27:12.04:1126,12,0	0/0:16,0:16:42.14:0,42,2193	0/0:33,0:33:84.20:0,84,3422	0/0:13,0:13:27.03:0,27,1290	0/0:14,0:14:33.08:0,33,1416	0/0:31,0:31:81.28:0,81,4121	0/0:25,0:24:60.18:0,60,2592	0/0:11,0:11:30.10:0,30,1302	0/0:24,0:24:57.20:0,57,2965	0/0:13,0:13:39.12:0,39,1709	0/0:17,0:17:48.15:0,48,2299	0/0:23,0:23:57.19:0,57,2734	0/0:47,0:46:99:0,126,5928	0/0:28,0:28:75.26:0,75,3931
chr10	27400385	.	TAA	T	440.44	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.611;DP=454;FS=3.399;HRun=10;HaplotypeScore=54.8502;InbreedingCoeff=0.8307;MQ=73.66;MQ0=2;MQRankSum=-0.061;QD=24.47;ReadPosRankSum=1.000;VQSLOD=3.1714;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:36.12:0,36,571	0/0:5,0:5:15.05:0,15,238	0/0:15,0:12:18.15:0,18,363	0/0:10,0:9:12.04:0,12,153	0/0:33,0:32:93.32:0,93,1455	0/0:14,0:14:42.13:0,42,644	0/0:9,0:9:21.07:0,21,333	0/0:23,0:23:57.08:0,57,845	0/0:10,0:10:21.07:0,21,319	0/0:27,0:27:66.22:0,66,1026	0/0:25,0:25:66.23:0,66,1048	0/0:8,0:8:24.07:0,24,356	0/0:12,0:12:36.12:0,36,569	0/0:16,0:16:36.12:0,36,570	1/1:1,17:18:48.13:535,48,0	0/0:18,0:18:42.14:0,42,667	0/0:24,0:24:69.23:0,69,1081	0/0:11,0:11:27.09:0,27,428	0/0:18,0:18:42.14:0,42,661	0/0:31,0:31:75.26:0,75,1184	0/0:4,0:4:12.04:0,12,188	0/0:9,0:10:29.46:0,29,437	0/0:14,0:14:39.13:0,39,614	0/0:3,0:3:6.02:0,6,95	0/0:19,0:19:42.14:0,42,663	0/0:16,0:16:42.14:0,42,666	0/0:28,0:28:75.24:0,75,1162	0/0:19,0:19:42.14:0,42,666
chr10	27400790	.	AAAAG	A	580.40	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=0.999;DP=619;FS=6.860;HRun=0;HaplotypeScore=138.0903;InbreedingCoeff=0.7914;MQ=68.62;MQ0=5;MQRankSum=-0.888;QD=24.18;ReadPosRankSum=2.091;VQSLOD=2.9967;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:34:57.14:0,57,880	0/0:12,0:12:31.89:0,32,481	0/0:31,0:19:5.58:0,6,176	0/0:18,0:7:5.78:0,6,80	0/0:34,0:33:74.70:0,75,1303	0/0:24,0:24:54.17:0,54,916	0/0:11,0:11:21.04:0,21,327	0/0:32,0:31:72.18:0,72,1100	0/0:19,0:19:35.78:0,36,632	0/0:41,0:42:99:0,106,1793	0/0:28,0:28:57.18:0,57,1034	0/0:16,0:16:39.12:0,39,673	0/0:19,0:20:42.12:0,42,745	0/0:16,0:16:33.11:0,33,563	1/1:3,21:24:42.14:675,42,0	0/0:15,0:15:29.92:0,30,507	0/0:17,0:17:33.11:0,33,614	0/0:19,0:19:49.57:0,50,817	0/0:23,0:22:57.15:0,57,977	0/0:32,0:32:72.23:0,72,1324	0/0:8,0:8:15.05:0,15,259	0/0:19,0:19:51.16:0,51,937	0/0:22,0:22:44.80:0,45,749	0/0:9,0:9:15.05:0,15,276	0/0:23,0:23:51.16:0,51,858	0/0:23,0:23:51.11:0,51,873	0/0:30,0:30:65.90:0,66,1114	0/0:18,0:18:36.12:0,36,673
chr10	27402148	.	C	CT	146.66	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=-1.093;DP=302;FS=0.000;HRun=9;HaplotypeScore=34.1228;InbreedingCoeff=0.3957;MQ=82.30;MQ0=4;MQRankSum=1.005;QD=5.06;ReadPosRankSum=0.273;VQSLOD=-0.4651;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:62.99:0,63,547	0/0:3,0:3:9:0,9,78	0/1:21,0:11:16.64:17,0,17	0/0:27,0:14:8.74:0,9,42	0/0:14,0:14:29.96:0,30,252	0/0:18,0:18:53.97:0,54,465	0/0:4,0:4:12:0,12,104	0/0:26,0:25:53.94:0,54,462	0/0:8,0:8:17.99:0,18,156	0/0:9,0:9:20.99:0,21,182	0/0:14,0:14:38.99:0,39,338	0/0:2,0:2:6:0,6,52	0/0:5,0:5:15:0,15,130	0/0:5,0:5:15:0,15,130	1/1:0,7:7:21.06:232,21,0	0/0:7,0:7:18:0,18,156	0/0:15,0:15:41.99:0,42,365	0/0:10,0:10:20.99:0,21,182	0/0:26,0:26:71.98:0,72,625	0/0:4,0:4:12:0,12,104	0/0:6,0:6:15:0,15,130	0/0:1,0:1:3:0,3,26	0/0:2,0:2:6:0,6,52	0/0:1,0:1:3:0,3,26	0/0:14,0:14:32.99:0,33,286	0/0:7,0:7:21:0,21,182	0/0:11,0:11:29.97:0,30,256	0/0:10,0:10:29.99:0,30,260
chr10	27402235	.	TC	T	79.38	PASS	AC=2;AF=0.037;AN=54;BaseQRankSum=3.581;DP=395;FS=7.668;HRun=4;HaplotypeScore=40.1367;InbreedingCoeff=0.8592;MQ=47.85;MQ0=13;MQRankSum=-2.436;QD=11.34;ReadPosRankSum=-0.234;VQSLOD=0.4367;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:84.28:0,84,1172	0/0:10,0:9:24.08:0,24,335	./.	0/0:13,0:5:12.02:0,12,130	0/0:19,0:19:39.13:0,39,538	0/0:14,0:14:39.13:0,39,545	0/0:12,0:11:24.08:0,24,335	0/0:11,0:8:21.07:0,21,293	0/0:15,0:15:42.14:0,42,585	0/0:21,0:20:60.20:0,60,836	0/0:10,0:10:30.10:0,30,419	0/0:13,0:13:33.11:0,33,460	0/0:10,0:10:21.07:0,21,293	0/0:21,0:21:57.18:0,57,779	1/1:0,7:6:15.04:168,15,0	0/0:4,0:4:12.04:0,12,168	0/0:11,0:11:24.07:0,24,320	0/0:19,0:19:45.12:0,45,593	0/0:5,0:4:9.03:0,9,126	0/0:14,0:14:36.06:0,36,448	0/0:21,0:18:48.14:0,48,653	0/0:9,0:8:21.07:0,21,291	0/0:11,0:11:27.09:0,27,377	0/0:15,0:15:39.13:0,39,545	0/0:22,0:22:57.12:0,57,772	0/0:21,0:21:63.18:0,63,841	0/0:20,0:20:53.91:0,54,735	0/0:9,0:9:24.08:0,24,336
chr10	27408062	.	A	AACACACACACACACAC	17938.99	PASS	AB=0.925;AC=48;AF=0.857;AN=56;BaseQRankSum=-4.328;DP=607;FS=5.801;HRun=0;HaplotypeScore=299.5698;InbreedingCoeff=0.3902;MQ=63.92;MQ0=7;MQRankSum=-2.878;QD=35.95;ReadPosRankSum=7.543;VQSLOD=2.6253;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:30,1:32:0.82:136,0,1	1/1:8,0:8:6.01:227,6,0	0/0:40,0:24:18:0,18,418	0/0:42,0:29:14.23:0,14,441	1/1:17,10:27:7.18:396,7,0	1/1:21,0:22:10.84:702,11,0	1/1:10,0:10:6.02:263,6,0	1/1:36,0:35:63.10:2039,63,0	1/1:18,0:18:20.45:1046,20,0	1/1:29,0:29:50.96:1932,51,0	1/1:14,0:13:2.28:145,2,0	1/1:14,0:14:14.40:607,14,0	1/1:12,0:12:18.02:627,18,0	1/1:20,0:21:4.76:168,5,0	1/1:22,0:22:4.16:145,4,0	1/1:20,0:20:15.05:695,15,0	1/1:16,0:17:3.01:113,3,0	0/1:9,0:10:77.34:487,0,77	1/1:22,1:23:39.03:1780,39,0	1/1:21,0:21:9.53:563,10,0	0/0:23,1:25:0.47:0,0,1	1/1:20,0:20:10.30:401,10,0	1/1:18,0:18:3.65:190,4,0	1/1:10,0:21:3.22:33,3,0	1/1:21,0:21:13.92:762,14,0	1/1:35,0:34:60:2430,60,0	1/1:22,0:22:36.12:1605,36,0	1/1:6,0:6:15.05:445,15,0
chr10	27408085	.	AGACTCTCTCTTACGTG	A	6961.80	PASS	AB=0.952;AC=22;AF=0.393;AN=56;BaseQRankSum=2.160;DP=595;FS=91.172;HRun=0;HaplotypeScore=266.1819;InbreedingCoeff=-0.6681;MQ=45.73;MQ0=12;MQRankSum=-4.397;QD=17.19;ReadPosRankSum=4.269;VQSLOD=-0.0378;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:23.34:0,23,671	0/1:4,0:4:99:108,0,370	0/0:50,0:22:52.45:0,52,2137	0/0:49,0:24:56.36:0,56,2258	0/1:17,2:19:87.23:87,0,509	0/1:22,1:23:99:363,0,1032	0/1:13,0:13:84.79:85,0,449	0/1:39,0:38:99:456,0,2684	0/1:17,0:17:99:581,0,510	0/1:22,2:24:99:954,0,1694	0/1:12,0:11:88.89:89,0,478	0/1:17,1:18:99:163,0,812	0/1:13,0:13:99:163,0,1168	0/1:18,2:20:99:130,0,702	0/0:27,0:27:21.36:0,21,1885	0/1:22,0:22:99:337,0,564	0/1:2,6:8:99:140,0,125	0/1:8,0:8:57.55:58,0,614	0/1:19,2:21:99:677,0,1538	0/1:20,0:20:99:246,0,858	0/0:23,0:23:7.73:0,8,254	0/1:23,0:23:99:293,0,277	0/1:19,0:19:99:132,0,328	0/0:11,0:11:4.26:0,4,244	0/1:18,1:19:99:102,0,1035	0/1:32,0:31:99:937,0,2233	0/1:19,1:20:99:738,0,704	0/1:10,1:11:99:123,0,1370
chr10	27408087	.	ACTCTCTCTTACGTG	A	6843.54	PASS	AB=0.855;AC=22;AF=0.393;AN=56;BaseQRankSum=3.594;DP=598;FS=80.047;HRun=0;HaplotypeScore=255.7853;InbreedingCoeff=-0.6518;MQ=44.64;MQ0=11;MQRankSum=-6.659;QD=16.73;ReadPosRankSum=5.542;VQSLOD=0.5357;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,2:31:26.25:0,26,867	0/1:2,2:4:99:121,0,347	0/0:48,0:21:57.80:0,58,2202	0/0:46,0:22:63.16:0,63,2285	0/1:20,0:20:99:115,0,465	0/1:21,2:23:99:304,0,1059	0/1:11,3:14:99:107,0,614	0/1:34,4:37:99:432,0,3065	0/1:10,7:17:99:721,0,532	0/1:19,5:24:99:817,0,1766	0/1:10,3:12:99:114,0,661	0/1:15,1:17:99:150,0,790	0/1:12,2:14:99:124,0,1308	0/1:14,5:19:99:113,0,695	0/0:29,0:29:19.13:0,19,2169	0/1:18,4:22:99:333,0,563	0/1:8,0:8:94.64:95,0,113	0/1:9,0:9:3.62:4,0,800	0/1:20,1:21:99:592,0,1763	0/1:17,3:20:99:278,0,826	0/0:23,0:23:9.77:0,10,342	0/1:15,8:23:99:308,0,334	0/1:14,5:19:99:137,0,328	0/0:11,0:11:3.90:0,4,215	0/1:16,4:20:99:105,0,1167	0/1:24,8:31:99:964,0,2309	0/1:14,7:21:99:841,0,876	0/1:11,0:11:71.45:71,0,1366
chr10	27408117	.	ACT	A	6542.25	PASS	AB=0.636;AC=36;AF=0.643;AN=56;BaseQRankSum=-4.177;DP=601;FS=6.126;HRun=0;HaplotypeScore=191.6836;InbreedingCoeff=-0.0945;MQ=51.89;MQ0=10;MQRankSum=2.665;QD=13.66;ReadPosRankSum=4.182;VQSLOD=4.2637;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,17:27:8.58:117,9,0	1/1:2,2:4:6.01:75,6,0	0/0:48,0:25:57.17:0,57,923	0/0:47,0:24:52.71:0,53,792	0/1:12,6:18:18.90:169,0,19	0/1:19,12:31:22.75:359,0,23	0/1:5,15:20:8.34:320,0,8	1/1:16,8:24:41.64:531,42,0	0/1:11,11:22:99:134,0,170	0/1:9,10:19:12.67:435,0,13	0/1:4,10:14:15.32:202,0,15	1/1:7,17:24:25.69:343,26,0	0/1:2,14:16:0.23:295,0,0	1/1:7,9:16:15.01:201,15,0	0/0:27,0:27:59.94:0,60,963	1/1:8,15:23:17.49:376,17,0	0/1:2,2:4:29.91:72,0,30	1/1:1,7:8:18.06:243,18,0	1/1:8,14:22:38.89:566,39,0	0/1:8,10:17:53.95:259,0,54	1/1:5,18:23:7.90:100,8,0	0/1:11,14:25:56.13:173,0,56	0/1:7,13:20:37.11:110,0,37	1/1:6,4:10:2.61:40,3,0	1/1:9,10:19:20.19:262,20,0	0/1:11,17:28:83.46:605,0,83	0/1:12,13:25:86.29:262,0,86	0/1:5,13:18:11.01:295,0,11
chr10	27408130	.	CACAT	C	1864.57	PASS	AB=0.991;AC=19;AF=0.339;AN=56;BaseQRankSum=-2.359;DP=628;FS=0.946;HRun=0;HaplotypeScore=197.5764;InbreedingCoeff=-0.3614;MQ=50.11;MQ0=10;MQRankSum=-5.292;QD=4.91;ReadPosRankSum=-1.796;VQSLOD=2.5326;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:37:27.39:0,27,390	0/1:5,0:5:31.47:40,0,31	0/0:40,0:20:43.66:0,44,572	0/0:40,0:19:23.55:0,24,444	0/0:22,0:22:33.52:0,34,406	0/1:32,0:32:43.24:43,0,336	0/1:23,0:23:55.83:56,0,317	0/1:17,1:18:99:145,0,115	0/1:27,0:27:22.47:22,0,261	0/1:21,0:21:99:151,0,258	0/0:18,0:18:27.50:0,27,369	0/1:21,1:22:99:134,0,145	0/1:20,0:20:13.08:13,0,516	0/1:18,0:18:18.05:18,0,178	1/1:16,14:30:63.10:971,63,0	0/1:23,0:23:3.47:3,0,271	0/1:4,0:4:23.47:23,0,25	0/0:10,0:10:19.08:0,19,233	0/1:22,0:22:93.08:173,0,93	0/0:21,0:20:21.46:0,21,305	0/1:28,0:28:10.13:10,0,170	0/0:29,0:29:26.99:0,27,352	0/1:16,1:17:18.41:18,0,163	0/0:12,0:12:1.24:0,1,45	0/0:18,0:18:6.03:0,6,178	0/1:25,0:25:83.77:84,0,355	0/1:25,0:25:96.07:96,0,274	0/1:20,0:20:24.01:24,0,369
chr10	27408132	.	CAT	C	3142.42	PASS	AB=0.932;AC=32;AF=0.571;AN=56;BaseQRankSum=-2.171;DP=624;FS=40.232;HRun=0;HaplotypeScore=177.0169;InbreedingCoeff=-0.4082;MQ=50.27;MQ0=9;MQRankSum=-2.733;QD=5.76;ReadPosRankSum=-2.658;VQSLOD=1.4705;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:36,1:36:0.74:1,0,119	1/1:5,0:5:7.24:52,7,0	0/0:38,0:19:32.18:0,32,429	0/0:38,0:20:22.65:0,23,354	0/1:21,1:22:79.05:79,0,87	0/1:18,14:32:62.64:125,0,63	0/1:22,1:23:31.25:127,0,31	1/1:16,0:16:26.47:189,26,0	0/1:26,1:27:49.21:133,0,49	0/1:18,3:21:6.96:299,0,7	0/1:17,2:19:65.78:105,0,66	0/1:20,2:22:19.94:113,0,20	0/1:19,1:20:94.14:94,0,139	0/1:17,1:18:25.65:56,0,26	1/1:30,0:30:62.52:471,63,0	1/1:22,0:22:15.75:176,16,0	1/1:4,1:5:8.84:83,9,0	0/1:11,0:11:13.17:81,0,13	1/1:21,1:22:45.87:329,46,0	0/1:19,2:20:35.94:55,0,36	0/1:28,0:28:11.18:11,0,55	0/1:29,0:29:75.08:91,0,75	0/1:13,3:16:27.45:43,0,27	0/1:12,0:12:12.25:36,0,12	0/1:16,2:18:9.77:102,0,10	0/1:24,1:25:34.51:208,0,35	0/1:24,1:25:26.40:171,0,26	0/1:18,2:20:49.57:81,0,50
chr10	27411920	.	G	GT	18182.18	PASS	AB=1.000;AC=54;AF=0.964;AN=56;BaseQRankSum=-5.384;DP=603;FS=8.747;HRun=6;HaplotypeScore=62.1136;InbreedingCoeff=0.2692;MQ=66.83;MQ0=5;MQRankSum=-1.999;QD=30.15;ReadPosRankSum=3.177;VQSLOD=5.3882;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,31:35:93.20:1136,93,0	1/1:0,5:5:15.05:189,15,0	0/1:19,0:11:2.72:3,0,121	0/1:16,0:11:19.09:19,0,87	1/1:5,38:43:99:1338,111,0	1/1:1,21:22:63.20:793,63,0	1/1:0,10:10:24.08:302,24,0	1/1:1,26:27:72.21:890,72,0	1/1:0,18:18:42.13:528,42,0	1/1:3,26:29:72.21:891,72,0	1/1:0,18:18:51.08:600,51,0	1/1:1,12:13:36.12:453,36,0	1/1:1,14:15:36.12:452,36,0	1/1:2,19:21:54.17:679,54,0	1/1:2,21:23:57.18:717,57,0	1/1:2,13:15:39.12:491,39,0	1/1:2,19:21:45.14:561,45,0	1/1:2,17:19:42.13:528,42,0	1/1:6,14:19:42.51:593,43,0	1/1:1,32:32:87.24:1076,87,0	1/1:1,9:10:24.08:302,24,0	1/1:1,24:25:66.21:826,66,0	1/1:0,23:23:63.20:793,63,0	1/1:2,20:22:57.18:717,57,0	1/1:3,22:25:66.21:830,66,0	1/1:2,32:34:96.29:1192,96,0	1/1:3,24:27:66.21:829,66,0	1/1:0,12:12:36.12:453,36,0
chr10	27413631	.	A	AT	1300.58	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-8.247;DP=669;FS=4.229;HRun=4;HaplotypeScore=59.4454;InbreedingCoeff=0.9976;MQ=84.70;MQ0=0;MQRankSum=-3.438;QD=34.23;ReadPosRankSum=0.504;VQSLOD=4.2526;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:90.20:0,90,988	0/0:12,0:12:36.09:0,36,400	0/0:20,0:20:54.14:0,54,597	0/0:26,0:26:72.15:0,72,783	0/0:37,0:37:99:0,99,1113	0/0:34,0:34:97.13:0,97,1072	0/0:17,0:17:51.13:0,51,568	0/0:31,0:31:84.19:0,84,913	0/0:23,0:23:69.17:0,69,763	0/0:28,0:28:84.23:0,84,940	0/0:24,0:24:72.20:0,72,815	0/0:15,0:15:45.11:0,45,501	0/0:22,0:22:66.16:0,66,728	0/0:16,0:16:45.13:0,45,510	1/1:1,37:38:99:1395,102,0	0/0:28,0:28:81.20:0,81,899	0/0:20,0:20:60.17:0,60,681	0/0:8,0:8:24.07:0,24,272	0/0:17,0:17:48.10:0,48,524	0/0:37,0:37:99:0,111,1259	0/0:15,0:15:39.11:0,39,442	0/0:28,0:28:81.23:0,81,918	0/0:26,0:26:75.18:0,75,831	0/0:19,0:19:54.12:0,54,591	0/0:19,0:19:57.14:0,57,628	0/0:24,0:24:72.18:0,72,799	0/0:38,0:38:99:0,114,1271	0/0:13,0:13:36.10:0,36,408
chr10	27414921	.	AAAACAAAC	A	17642.49	PASS	AB=0.743;AC=48;AF=0.857;AN=56;BaseQRankSum=0.452;DP=581;FS=3.431;HRun=0;HaplotypeScore=166.8826;InbreedingCoeff=0.6430;MQ=58.89;MQ0=1;MQRankSum=-4.666;QD=34.73;ReadPosRankSum=3.049;VQSLOD=4.5031;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,20:30:41.84:1009,42,0	1/1:3,8:11:24.08:611,24,0	0/0:20,0:14:14.64:0,15,360	0/0:33,0:26:33.11:0,33,912	1/1:4,23:27:60.11:1248,60,0	1/1:3,14:17:24.08:612,24,0	1/1:6,7:13:6.02:152,6,0	1/1:17,12:28:36.10:642,36,0	1/1:3,16:19:39.13:990,39,0	1/1:12,20:32:57.19:1330,57,0	1/1:8,15:23:30.10:734,30,0	1/1:3,12:15:27.09:688,27,0	1/1:5,13:18:30.10:765,30,0	1/1:8,15:22:30.10:765,30,0	1/1:2,17:19:30.10:760,30,0	1/1:6,8:14:14.69:382,15,0	1/1:11,12:23:12.04:306,12,0	0/1:9,4:13:76.80:193,0,77	0/0:10,0:19:29.99:0,30,306	1/1:6,21:27:54.15:1211,54,0	1/1:14,9:23:6.07:222,6,0	1/1:7,18:25:45.11:956,45,0	1/1:6,9:14:21.03:471,21,0	0/1:8,5:13:72.22:341,0,72	1/1:5,12:17:16.74:816,17,0	1/1:7,13:20:39.13:912,39,0	1/1:9,18:27:39.13:989,39,0	1/1:4,11:15:21.07:536,21,0
chr10	27416177	.	G	GT	12768.79	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-1.974;DP=460;FS=1.852;HRun=8;HaplotypeScore=61.0666;InbreedingCoeff=0.9303;MQ=80.86;MQ0=0;MQRankSum=-6.087;QD=29.69;ReadPosRankSum=4.252;VQSLOD=4.5818;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,22:22:63.10:709,63,0	1/1:1,2:3:6.02:69,6,0	0/0:13,0:12:18.03:0,18,257	0/0:16,0:16:24.01:0,24,217	1/1:0,12:12:36.11:415,36,0	1/1:2,23:24:66.20:761,66,0	1/1:4,10:14:27.01:295,27,0	1/1:3,32:35:71.82:1049,72,0	1/1:2,19:21:57.17:658,57,0	1/1:4,18:22:57.14:635,57,0	1/1:0,11:11:33.06:366,33,0	1/1:2,17:19:48.14:554,48,0	1/1:2,16:18:45.13:519,45,0	1/1:3,17:20:51.08:572,51,0	1/1:0,18:18:54.16:623,54,0	1/1:1,11:12:33.10:381,33,0	1/1:0,12:12:36.11:414,36,0	1/1:0,6:6:18.05:208,18,0	1/1:5,25:30:75.22:865,75,0	1/1:3,15:18:20.60:462,21,0	1/1:0,8:8:24.03:262,24,0	1/1:3,5:8:18.01:193,18,0	1/1:4,15:19:24.93:528,25,0	1/1:2,9:11:27.08:312,27,0	1/1:0,12:12:36.11:415,36,0	1/1:2,12:14:36.11:415,36,0	1/1:4,22:27:63.02:707,63,0	1/1:0,13:13:33.10:381,33,0
chr10	27420078	.	ACG	A	2879.16	PASS	AB=0.814;AC=45;AF=0.833;AN=54;BaseQRankSum=-0.935;DP=398;FS=25.615;HRun=0;HaplotypeScore=86.2437;InbreedingCoeff=0.2664;MQ=35.09;MQ0=27;MQRankSum=1.679;QD=9.14;ReadPosRankSum=2.124;VQSLOD=1.6934;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,1:8:2.98:12,3,0	1/1:6,2:8:4.50:22,4,0	0/0:16,0:1:2.97:0,3,20	0/0:42,0:1:0.47:0,0,1	1/1:14,3:17:6.02:88,6,0	1/1:12,3:15:10.51:159,11,0	1/1:11,2:13:13.82:80,14,0	1/1:14,2:12:22.69:153,23,0	1/1:14,3:16:2.96:88,3,0	1/1:10,6:16:43.47:375,43,0	1/1:5,3:8:3.31:41,3,0	1/1:8,4:12:18.60:181,19,0	1/1:7,3:10:8.84:83,9,0	1/1:12,3:15:5.73:43,6,0	0/1:11,5:15:18.53:94,0,19	1/1:17,3:20:14.37:150,14,0	1/1:15,1:16:21.27:218,21,0	1/1:4,0:3:8.99:97,9,0	0/1:9,2:10:44.59:110,0,45	1/1:13,0:13:5.95:63,6,0	./.	0/0:2,12:14:0.75:0,1,2	1/1:12,1:13:5.65:61,6,0	0/1:8,2:8:0.04:0,0,0	1/1:13,2:15:16.92:223,17,0	1/1:8,6:13:32.30:333,32,0	1/1:17,4:21:35.38:317,35,0	1/1:6,0:4:0.47:1,0,0
chr10	27420101	.	GAGAGAC	G	1473.07	PASS	AB=0.990;AC=40;AF=0.741;AN=54;BaseQRankSum=0.583;DP=552;FS=19.767;HRun=0;HaplotypeScore=128.3106;InbreedingCoeff=-0.0786;MQ=54.84;MQ0=33;MQRankSum=2.524;QD=3.18;ReadPosRankSum=1.515;VQSLOD=1.4299;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:15:8.40:55,8,0	1/1:10,0:10:7.65:92,8,0	0/0:51,0:9:5.66:0,6,108	0/1:93,0:19:12.71:13,0,91	./.	1/1:22,1:23:7.96:36,8,0	1/1:15,1:16:20.28:121,20,0	0/1:21,0:21:99:109,0,161	1/1:15,1:15:10.86:42,11,0	0/1:20,0:20:99:138,0,105	0/1:11,0:11:11.73:50,0,12	0/1:13,0:13:1.17:39,0,1	1/1:14,0:14:5.52:28,6,0	0/0:12,0:12:0.40:0,0,1	0/1:18,0:18:15.27:15,0,19	0/1:16,1:17:12.70:78,0,13	1/1:20,0:20:11.84:62,12,0	0/1:4,0:3:13.18:24,0,13	0/1:11,0:10:18.91:114,0,19	1/1:18,0:18:0.47:1,0,0	1/1:10,0:10:3.54:12,4,0	1/1:21,0:21:11.42:63,11,0	1/1:14,0:14:0.47:1,0,0	1/1:9,0:8:2.63:12,3,0	1/1:15,1:16:10.75:76,11,0	0/1:20,1:20:10.60:252,0,11	1/1:20,0:19:20.05:91,20,0	1/1:11,0:10:9.25:90,9,0
chr10	27420103	.	GAGAC	G	4266.57	PASS	AB=0.836;AC=41;AF=0.759;AN=54;BaseQRankSum=-2.001;DP=549;FS=10.904;HRun=0;HaplotypeScore=110.2113;InbreedingCoeff=0.0030;MQ=56.38;MQ0=30;MQRankSum=3.115;QD=9.32;ReadPosRankSum=2.297;VQSLOD=3.1995;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,11:15:9.01:137,9,0	1/1:4,6:10:8.89:196,9,0	0/0:53,0:11:4.87:0,5,67	0/1:89,0:21:10.57:11,0,70	./.	1/1:4,19:23:9.03:168,9,0	1/1:10,7:17:22.76:338,23,0	0/1:19,1:20:99:263,0,159	1/1:4,12:15:12.51:228,13,0	0/1:17,3:20:28.50:311,0,29	1/1:10,0:10:11.44:112,11,0	0/1:10,3:13:2.76:156,0,3	1/1:2,11:13:6.49:109,6,0	0/0:8,4:12:0.40:0,0,1	0/1:18,0:18:9.52:10,0,58	1/1:2,14:16:14.82:162,15,0	1/1:5,15:20:14.84:148,15,0	0/1:4,0:3:13.58:27,0,14	0/1:4,6:9:18.04:227,0,18	1/1:1,17:18:0.94:2,1,0	1/1:10,0:10:6.02:98,6,0	1/1:16,2:18:17.97:260,18,0	1/1:5,9:14:0.47:1,0,0	1/1:6,3:8:2.40:56,2,0	1/1:13,2:15:16.82:205,17,0	0/1:8,14:21:1.93:604,0,2	1/1:4,17:21:15.51:359,16,0	0/1:7,7:13:5.60:81,0,6
chr10	27420107	.	C	CAG	185.63	PASS	AB=1.000;AC=20;AF=0.385;AN=52;BaseQRankSum=-4.043;DP=541;FS=2.119;HRun=0;HaplotypeScore=115.1209;InbreedingCoeff=0.1502;MQ=61.75;MQ0=27;MQRankSum=1.411;QD=0.66;ReadPosRankSum=-4.272;VQSLOD=0.9502;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:14:7.94:0,8,32	0/1:10,0:10:7.03:7,0,24	0/0:58,0:16:9.93:0,10,87	0/1:90,0:22:6.95:7,0,102	./.	0/0:23,0:23:6.67:0,7,26	0/1:16,0:16:0.68:1,0,47	1/1:21,0:21:5.50:36,5,0	0/0:15,0:14:10.98:0,11,49	1/1:18,0:18:3.10:28,3,0	0/0:10,0:10:0.29:0,0,8	0/1:14,0:14:14.79:16,0,15	0/0:13,0:13:2.98:0,3,12	1/1:10,0:10:0.47:1,0,0	1/1:8,10:18:9.50:144,10,0	0/0:16,0:16:5.96:0,6,25	0/0:19,0:19:2.74:0,3,12	1/1:4,0:3:2.13:4,2,0	0/0:12,0:12:4.14:0,4,22	./.	0/0:8,0:8:3.22:0,3,13	0/0:17,0:17:7.33:0,7,23	0/1:13,0:13:0:0,0,0	0/1:10,0:9:4.25:20,0,4	1/1:15,0:15:2.12:17,2,0	0/1:21,0:21:16.89:33,0,17	0/1:22,0:22:4.47:4,0,45	0/0:13,0:12:3.18:0,3,13
chr10	27420337	.	A	AAC	15892.80	PASS	AB=1.000;AC=53;AF=0.946;AN=56;BaseQRankSum=-3.162;DP=440;FS=2.016;HRun=0;HaplotypeScore=46.4151;InbreedingCoeff=0.7416;MQ=61.30;MQ0=1;MQRankSum=-1.968;QD=36.62;ReadPosRankSum=2.808;VQSLOD=6.9958;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,16:18:39.13:648,39,0	1/1:1,3:4:6.02:102,6,0	0/0:5,1:4:12.04:0,12,150	0/1:4,0:1:0:0,0,0	1/1:4,29:33:72.24:1179,72,0	1/1:1,12:13:30.10:510,30,0	1/1:1,9:10:18.06:306,18,0	1/1:1,21:23:66.18:1025,66,0	1/1:2,6:8:12.04:204,12,0	1/1:1,14:16:45.14:736,45,0	1/1:3,30:33:72.24:1188,72,0	1/1:0,7:7:18.06:306,18,0	1/1:3,16:19:51.17:856,51,0	1/1:0,14:14:36.12:612,36,0	1/1:3,14:17:33.11:561,33,0	1/1:0,12:12:21.07:357,21,0	1/1:4,12:16:33.11:555,33,0	1/1:2,5:7:12.02:175,12,0	1/1:8,16:25:51.02:750,51,0	1/1:4,23:28:60.20:978,60,0	1/1:2,11:14:30.10:510,30,0	1/1:3,13:16:36.12:612,36,0	1/1:1,18:19:39.11:663,39,0	1/1:0,6:6:12.04:204,12,0	1/1:1,10:11:27.09:446,27,0	1/1:1,22:23:60.19:983,60,0	1/1:1,25:26:60.21:1019,60,0	1/1:1,11:12:24.08:408,24,0
chr10	27421830	.	C	CA	13215.29	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-1.048;DP=556;FS=1.463;HRun=7;HaplotypeScore=178.4069;InbreedingCoeff=0.9621;MQ=58.64;MQ0=4;MQRankSum=-3.193;QD=26.59;ReadPosRankSum=2.794;VQSLOD=2.6700;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,20:28:57.75:660,58,0	1/1:1,7:8:23.74:260,24,0	0/0:17,0:12:25.02:0,25,215	0/0:24,0:14:29.83:0,30,257	1/1:9,24:33:52.37:803,52,0	1/1:9,11:20:46.67:474,47,0	1/1:4,10:13:27.97:324,28,0	1/1:11,16:25:60.78:608,61,0	1/1:4,20:24:68.36:759,68,0	1/1:6,20:26:60.18:711,60,0	1/1:4,19:23:54.51:642,55,0	1/1:3,9:12:29.76:327,30,0	1/1:6,16:22:59.01:643,59,0	1/1:6,8:14:38.63:386,39,0	0/0:18,0:18:27.70:0,28,163	1/1:3,12:15:30.23:453,30,0	1/1:5,10:15:30.09:358,30,0	1/1:3,3:6:6.49:74,6,0	1/1:5,12:17:44.29:481,44,0	1/1:9,25:34:86.94:968,87,0	1/1:5,9:14:27.08:322,27,0	1/1:9,14:23:54.20:590,54,0	1/1:4,18:22:63.15:731,63,0	1/1:4,6:10:21.48:230,21,0	1/1:9,17:26:59.44:646,59,0	1/1:6,15:21:56.70:602,57,0	1/1:10,20:30:77.45:845,77,0	1/1:1,12:13:27.08:318,27,0
chr10	27421848	.	CA	C	3802.56	PASS	AB=0.802;AC=34;AF=0.607;AN=56;BaseQRankSum=1.209;DP=575;FS=0.888;HRun=9;HaplotypeScore=193.4623;InbreedingCoeff=-0.1983;MQ=55.90;MQ0=4;MQRankSum=-2.370;QD=7.43;ReadPosRankSum=3.877;VQSLOD=0.1795;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:22,10:32:22.03:342,22,0	0/1:7,5:12:37.35:102,0,37	0/0:26,0:13:25.30:0,25,188	0/1:30,0:15:4.78:5,0,100	1/1:20,9:29:12.16:285,12,0	0/1:11,11:22:29.56:250,0,30	0/1:9,5:14:5.99:57,0,6	1/1:17,16:31:3.81:380,4,0	0/1:18,3:21:60.48:109,0,60	0/1:18,2:20:79.43:79,0,116	1/1:17,7:24:16.40:211,16,0	0/1:9,4:13:50.96:86,0,51	0/1:14,8:22:99:144,0,100	0/1:9,10:19:1.02:235,0,1	0/0:22,0:22:17.19:0,17,62	0/0:15,0:15:1.19:0,1,77	0/1:14,0:14:2.19:2,0,28	0/1:7,4:11:16.50:90,0,17	0/1:14,6:20:99:158,0,100	0/1:23,5:28:28.37:163,0,28	1/1:8,7:15:0.87:102,1,0	1/1:13,7:20:10.01:212,10,0	1/1:17,5:22:4.17:166,4,0	1/1:8,6:14:3.95:136,4,0	0/1:16,4:20:2.64:130,0,3	0/1:15,8:23:52.15:205,0,52	0/1:21,4:25:2.67:128,0,3	1/1:9,0:9:6.51:25,7,0
chr10	27421849	.	A	AAAACAAAAC	31592.58	PASS	AB=1.000;AC=53;AF=0.946;AN=56;BaseQRankSum=-5.583;DP=577;FS=21.359;HRun=0;HaplotypeScore=178.2563;InbreedingCoeff=0.4342;MQ=55.03;MQ0=4;MQRankSum=-3.219;QD=57.65;ReadPosRankSum=3.746;VQSLOD=3.1994;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:21,11:32:52.29:2154,52,0	1/1:10,2:12:33.09:622,33,0	0/1:26,0:13:9.55:10,0,208	0/0:29,0:14:0.42:0,0,261	1/1:19,10:29:75.17:1806,75,0	1/1:18,4:22:63.17:1269,63,0	1/1:10,2:12:27.08:664,27,0	1/1:30,0:29:69.90:877,70,0	1/1:11,10:21:60.16:1827,60,0	1/1:14,6:20:57.15:1302,57,0	1/1:16,8:24:60.15:1620,60,0	1/1:8,5:13:36.11:1075,36,0	1/1:18,5:23:60.17:1378,60,0	1/1:15,4:19:51.06:1007,51,0	1/1:1,20:24:21.07:983,21,0	1/1:8,8:19:32.59:856,33,0	1/1:9,1:14:21.07:715,21,0	1/1:12,0:12:12.97:414,13,0	1/1:17,3:21:34.43:1037,34,0	1/1:17,11:28:79.35:2019,79,0	1/1:14,1:15:33.04:582,33,0	1/1:12,7:19:54.16:1387,54,0	1/1:16,6:22:63.01:1334,63,0	1/1:11,3:14:19.92:957,20,0	1/1:13,7:20:59.79:1536,60,0	1/1:17,5:22:63.18:1350,63,0	1/1:13,11:25:69.16:2127,69,0	1/1:5,4:9:27.02:686,27,0
chr10	27423505	.	A	AC	6143.80	PASS	AB=0.766;AC=49;AF=0.875;AN=56;BaseQRankSum=2.782;DP=274;FS=23.367;HRun=0;HaplotypeScore=83.1069;InbreedingCoeff=0.4114;MQ=36.03;MQ0=12;MQRankSum=-4.134;QD=24.77;ReadPosRankSum=0.598;VQSLOD=3.6365;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,3:4:3.89:37,4,0	1/1:2,1:3:3:40,3,0	0/0:14,0:3:6.02:0,6,83	0/1:10,0:5:9.02:9,0,86	1/1:2,18:20:49.74:563,50,0	1/1:3,4:6:14.56:175,15,0	1/1:2,9:8:20.51:228,21,0	1/1:5,11:15:40.92:478,41,0	0/1:2,6:8:17.71:202,0,18	1/1:4,8:11:26.63:271,27,0	1/1:2,8:10:19.87:229,20,0	0/1:5,3:8:3.92:79,0,4	1/1:1,8:8:23.11:281,23,0	1/1:3,7:10:20.42:244,20,0	0/0:12,0:12:32.97:0,33,394	1/1:1,7:8:21.07:277,21,0	1/1:3,11:13:26.11:312,26,0	1/1:2,4:6:12.92:158,13,0	1/1:5,7:11:29.40:323,29,0	1/1:1,11:10:24.04:297,24,0	1/1:4,1:3:6.86:45,7,0	1/1:1,6:7:20.10:238,20,0	1/1:0,6:6:14.98:175,15,0	1/1:0,6:5:9.03:108,9,0	1/1:3,8:11:20.08:239,20,0	1/1:3,15:18:47.52:608,48,0	1/1:2,9:11:30.04:370,30,0	1/1:0,4:4:12.04:160,12,0
chr10	27423520	.	C	CA	6390.83	PASS	AB=0.850;AC=48;AF=0.857;AN=56;BaseQRankSum=2.795;DP=292;FS=61.004;HRun=4;HaplotypeScore=94.0147;InbreedingCoeff=0.3464;MQ=44.26;MQ0=9;MQRankSum=-5.457;QD=24.39;ReadPosRankSum=2.890;VQSLOD=0.4395;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,3:7:11.25:130,11,0	1/1:2,0:2:3.01:33,3,0	0/0:19,0:8:23.93:0,24,235	0/0:11,0:6:17:0,17,161	1/1:18,1:19:51.44:581,51,0	0/1:7,2:8:11.69:219,0,12	1/1:11,1:9:21.05:246,21,0	1/1:16,3:18:42.08:475,42,0	0/1:7,1:8:11.25:193,0,11	1/1:6,3:8:24.05:265,24,0	1/1:7,2:9:21.06:256,21,0	0/1:5,4:9:11.70:232,0,12	1/1:9,1:9:24.06:264,24,0	1/1:11,0:11:21.03:222,21,0	0/1:12,0:12:46.79:47,0,105	1/1:8,0:8:23.99:230,24,0	1/1:8,7:15:30.09:363,30,0	1/1:7,1:8:20.26:202,20,0	1/1:12,2:13:3.29:229,3,0	1/1:11,0:10:27.08:313,27,0	1/1:1,4:4:12:139,12,0	1/1:5,1:6:15.04:181,15,0	1/1:8,1:9:15.04:182,15,0	1/1:5,1:5:9.03:106,9,0	1/1:8,1:9:24.07:283,24,0	1/1:16,2:18:45.11:499,45,0	1/1:11,0:11:27.07:310,27,0	1/1:6,0:6:18.04:193,18,0
chr10	27423521	.	AAAC	A	8654.03	PASS	AB=0.742;AC=47;AF=0.839;AN=56;BaseQRankSum=2.100;DP=289;FS=70.204;HRun=0;HaplotypeScore=94.3146;InbreedingCoeff=0.3038;MQ=44.42;MQ0=8;MQRankSum=-4.069;QD=33.28;ReadPosRankSum=4.541;VQSLOD=2.3000;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,2:7:12.04:149,12,0	1/1:1,1:2:3.01:50,3,0	0/0:18,0:8:23.88:0,24,347	0/0:11,0:6:16.87:0,17,278	1/1:3,16:19:51.62:733,52,0	0/1:4,5:8:42.29:303,0,42	1/1:5,7:9:24.22:329,24,0	1/1:8,10:17:42.87:629,43,0	0/1:3,5:8:10.90:246,0,11	1/1:3,6:8:24.04:315,24,0	1/1:2,7:9:21.07:324,21,0	0/1:6,3:9:27.55:261,0,28	1/1:1,9:9:26.76:397,27,0	1/1:4,7:11:23.67:347,24,0	0/1:12,0:12:19.13:20,0,19	1/1:1,7:8:24.08:382,24,0	1/1:8,7:15:30.10:468,30,0	1/1:1,7:8:23.87:329,24,0	0/1:8,6:13:9.48:311,0,9	1/1:1,10:10:27.09:428,27,0	1/1:5,0:4:12.04:164,12,0	1/1:1,5:6:17.65:242,18,0	1/1:4,5:9:22.92:245,23,0	1/1:4,2:5:9.03:140,9,0	1/1:1,8:9:24.08:381,24,0	1/1:4,13:17:46.10:731,46,0	1/1:0,11:11:29.83:433,30,0	1/1:0,6:6:18.06:296,18,0
chr10	27423524	.	CAAACA	C	6123.84	PASS	AB=1.000;AC=50;AF=0.893;AN=56;BaseQRankSum=3.870;DP=294;FS=67.475;HRun=0;HaplotypeScore=116.1550;InbreedingCoeff=0.5421;MQ=44.76;MQ0=7;MQRankSum=-4.780;QD=23.20;ReadPosRankSum=3.661;VQSLOD=1.9487;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,0:8:13.18:98,13,0	1/1:3,0:3:6.01:60,6,0	0/0:18,0:8:19.08:0,19,248	0/0:12,0:7:16.36:0,16,249	1/1:17,0:18:50.06:433,50,0	0/1:9,0:8:39.99:173,0,40	1/1:11,0:8:22.14:206,22,0	1/1:17,0:16:39.95:327,40,0	1/1:7,0:7:17.86:171,18,0	1/1:12,0:11:28.24:234,28,0	1/1:9,0:9:21.01:214,21,0	0/1:9,0:9:20.68:175,0,21	1/1:10,0:9:25.11:243,25,0	1/1:10,0:10:20.95:224,21,0	1/1:1,11:12:27.09:568,27,0	1/1:9,0:9:26.75:269,27,0	1/1:16,0:16:34.52:300,35,0	1/1:8,0:8:19.05:145,19,0	1/1:11,0:10:5.77:172,6,0	1/1:11,0:10:26.94:286,27,0	1/1:7,0:7:17.10:151,17,0	1/1:7,0:7:18.89:181,19,0	1/1:8,0:8:19.46:147,19,0	1/1:7,0:6:11.44:80,11,0	1/1:11,0:11:30.02:306,30,0	1/1:16,0:16:46.35:466,46,0	1/1:11,0:11:29.40:288,29,0	1/1:7,0:7:20.84:205,21,0
chr10	27423528	.	CA	C	3897.89	PASS	AB=0.947;AC=53;AF=0.946;AN=56;BaseQRankSum=4.941;DP=293;FS=36.285;HRun=10;HaplotypeScore=104.8307;InbreedingCoeff=0.3566;MQ=47.83;MQ0=6;MQRankSum=-3.441;QD=13.72;ReadPosRankSum=4.931;VQSLOD=1.3930;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,4:9:13.85:90,14,0	1/1:1,3:4:6:51,6,0	0/1:17,1:9:28.33:28,0,147	0/0:9,0:6:8.92:0,9,93	1/1:3,15:18:37.64:257,38,0	1/1:4,5:8:2.09:103,2,0	1/1:6,6:9:20.37:152,20,0	1/1:11,7:17:28.89:205,29,0	1/1:1,5:6:16.24:115,16,0	1/1:4,7:10:25.93:180,26,0	1/1:3,6:9:20.14:145,20,0	1/1:6,2:9:12.57:92,13,0	1/1:3,7:9:17.45:154,17,0	1/1:4,6:10:17.38:152,17,0	1/1:11,0:11:24.92:113,25,0	1/1:2,7:9:23.45:176,23,0	1/1:9,6:15:25.43:198,25,0	1/1:5,3:8:10.49:76,10,0	1/1:6,5:10:13.82:105,14,0	1/1:2,9:10:26.17:204,26,0	1/1:4,3:7:14.33:103,14,0	1/1:1,6:7:13.65:123,14,0	1/1:3,5:8:5.03:75,5,0	1/1:4,3:6:4.72:44,5,0	1/1:4,7:11:29.17:228,29,0	1/1:4,13:17:44.08:351,44,0	1/1:1,11:12:31.63:232,32,0	1/1:1,6:7:17.94:146,18,0
chr10	27425219	.	GT	G	11378.75	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-7.607;DP=619;FS=11.842;HRun=9;HaplotypeScore=72.6892;InbreedingCoeff=0.9782;MQ=79.61;MQ0=4;MQRankSum=-2.697;QD=21.39;ReadPosRankSum=6.501;VQSLOD=4.3143;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,21:24:55.58:498,56,0	1/1:0,7:7:21.01:192,21,0	0/0:30,0:23:27.10:0,27,329	0/0:53,1:35:35.55:0,36,402	1/1:3,25:28:37.41:596,37,0	1/1:4,19:23:45.01:412,45,0	1/1:4,16:20:33.01:302,33,0	1/1:5,15:20:44.99:405,45,0	1/1:0,18:18:48.03:439,48,0	1/1:1,26:27:75.03:682,75,0	1/1:4,16:20:51.02:465,51,0	1/1:2,20:22:51.03:467,51,0	1/1:4,15:19:39.02:357,39,0	1/1:1,18:19:45.02:411,45,0	1/1:3,22:25:25.41:487,25,0	1/1:4,21:25:54.02:494,54,0	1/1:1,21:22:60.03:549,60,0	1/1:1,13:14:16.10:233,16,0	1/1:2,17:19:51.01:463,51,0	1/1:2,21:23:22.20:444,22,0	1/1:3,10:13:21.01:192,21,0	1/1:1,18:19:45.02:411,45,0	1/1:2,18:20:45.02:411,45,0	1/1:2,22:24:60.03:549,60,0	1/1:4,22:26:66.01:604,66,0	1/1:2,18:20:54.02:490,54,0	1/1:3,25:28:75.04:686,75,0	1/1:0,7:7:15.01:137,15,0
chr10	27425788	.	G	GACAAAC	6284.11	PASS	AB=0.613;AC=28;AF=0.500;AN=56;BaseQRankSum=15.075;DP=572;FS=4.619;HRun=0;HaplotypeScore=139.6089;InbreedingCoeff=-0.6909;MQ=65.03;MQ0=5;MQRankSum=1.095;QD=11.70;ReadPosRankSum=9.416;VQSLOD=2.6788;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:10,0:28:99:309,0,231	0/1:5,0:11:99:102,0,179	0/0:22,0:16:41.93:0,42,772	0/0:13,0:9:22.32:0,22,315	0/1:14,0:37:99:431,0,558	0/1:6,0:14:99:169,0,213	0/1:12,0:18:60.61:61,0,431	0/1:22,0:32:99:158,0,737	0/1:4,0:18:99:222,0,141	0/1:10,0:27:99:346,0,359	0/1:9,0:22:99:219,0,361	1/1:1,0:6:12:105,12,0	0/1:5,0:25:99:359,0,165	0/1:5,0:13:99:102,0,197	0/1:10,1:22:99:377,0,320	0/1:3,0:19:94.93:249,0,95	0/1:10,0:20:96.54:97,0,234	0/1:8,0:22:99:234,0,245	0/1:9,0:17:99:218,0,222	0/1:6,0:23:99:304,0,221	0/1:2,0:7:73.29:88,0,73	0/1:4,0:14:99:191,0,103	0/1:7,0:27:99:361,0,307	0/1:5,0:16:99:102,0,166	0/1:7,0:29:99:377,0,248	0/1:7,0:20:99:262,0,159	0/1:3,0:35:1.76:632,0,2	1/1:2,0:12:24:211,24,0
chr10	27426848	.	G	GAA	14909.11	PASS	AB=0.577;AC=51;AF=0.911;AN=56;BaseQRankSum=-6.178;DP=677;FS=5.055;HRun=11;HaplotypeScore=91.5744;InbreedingCoeff=0.7020;MQ=71.43;MQ0=1;MQRankSum=-2.770;QD=23.44;ReadPosRankSum=2.188;VQSLOD=4.7660;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,15:24:6.20:308,6,0	1/1:0,6:7:18.06:247,18,0	0/0:19,0:18:25.71:0,26,187	0/0:18,0:18:13.98:0,14,201	1/1:4,17:22:56.23:631,56,0	1/1:4,16:23:35.16:471,35,0	0/1:4,0:15:24.71:61,0,25	1/1:12,24:41:57.42:904,57,0	1/1:1,17:21:50.14:647,50,0	1/1:8,17:28:24.33:563,24,0	1/1:2,22:26:66.46:729,66,0	1/1:3,17:21:6.50:414,7,0	1/1:2,23:27:35.86:481,36,0	1/1:1,18:19:33.10:460,33,0	1/1:1,16:18:30.10:435,30,0	1/1:5,26:35:39.32:790,39,0	1/1:5,16:23:47.13:606,47,0	1/1:2,6:9:27.04:347,27,0	1/1:9,21:30:59.97:728,60,0	1/1:6,25:34:79.51:901,80,0	1/1:2,10:16:28.04:295,28,0	1/1:3,26:31:71.25:901,71,0	1/1:11,10:21:42.56:584,43,0	1/1:2,11:14:24.04:314,24,0	1/1:4,16:24:56.40:715,56,0	1/1:10,26:41:96.22:1072,96,0	1/1:8,36:49:71.70:948,72,0	1/1:1,12:14:26.68:357,27,0
chr10	27429735	.	G	GCACACACA	19114.76	PASS	AB=0.719;AC=49;AF=0.907;AN=54;BaseQRankSum=-4.305;DP=672;FS=10.722;HRun=0;HaplotypeScore=188.4927;InbreedingCoeff=0.7019;MQ=55.18;MQ0=6;MQRankSum=-4.969;QD=34.19;ReadPosRankSum=2.350;VQSLOD=3.7979;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,6:22:18.06:638,18,0	1/1:8,3:12:12.04:495,12,0	0/0:53,0:31:17.17:0,17,356	0/0:50,0:33:29.25:0,29,608	0/1:14,5:23:4.44:481,0,4	1/1:12,9:22:18.06:747,18,0	1/1:18,6:26:21.07:783,21,0	1/1:33,0:31:24.97:592,25,0	1/1:11,8:20:15.05:622,15,0	1/1:25,4:32:33.09:930,33,0	1/1:17,10:30:21.07:808,21,0	1/1:10,6:18:24.08:916,24,0	1/1:13,9:25:39.13:1432,39,0	1/1:3,7:12:24.08:934,24,0	1/1:15,6:25:18.06:744,18,0	1/1:14,8:25:27.09:919,27,0	1/1:11,5:19:24.55:877,25,0	1/1:2,2:4:6.02:250,6,0	1/1:12,5:17:30.02:858,30,0	1/1:14,6:23:15.05:561,15,0	1/1:25,0:25:6.02:222,6,0	1/1:6,6:13:14.55:602,15,0	1/1:10,5:21:17.87:679,18,0	1/1:16,2:24:18.06:624,18,0	1/1:20,15:41:51.18:1955,51,0	1/1:19,5:28:33.07:823,33,0	1/1:10,6:18:14.94:623,15,0	./.
chr10	27429978	.	AT	A	16442.99	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=1.020;DP=522;FS=0.866;HRun=3;HaplotypeScore=51.5111;InbreedingCoeff=0.8935;MQ=77.46;MQ0=0;MQRankSum=-7.570;QD=32.95;ReadPosRankSum=4.136;VQSLOD=5.0018;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,40:40:90.28:1114,90,0	1/1:1,18:19:54.17:669,54,0	0/0:18,0:18:48.16:0,48,683	0/0:5,0:5:12.04:0,12,173	1/1:0,28:28:78.24:966,78,0	1/1:0,15:15:45.14:558,45,0	1/1:0,8:8:21.07:260,21,0	1/1:0,44:44:99:1610,132,0	1/1:0,15:15:42.13:521,42,0	1/1:0,29:29:84.26:1041,84,0	1/1:0,21:21:48.15:595,48,0	1/1:0,19:19:51.16:632,51,0	1/1:1,22:23:63.20:780,63,0	1/1:0,13:13:39.08:466,39,0	1/1:2,25:27:69.22:855,69,0	1/1:0,10:10:27.08:335,27,0	1/1:0,17:17:45.14:558,45,0	1/1:0,2:2:3.01:37,3,0	1/1:2,16:18:48.12:578,48,0	1/1:2,28:30:84.20:1022,84,0	1/1:0,13:13:30.09:372,30,0	1/1:0,14:14:36.11:446,36,0	1/1:0,9:9:24.08:297,24,0	1/1:0,13:13:33.10:409,33,0	1/1:1,20:21:54.17:669,54,0	1/1:0,17:17:51.16:632,51,0	1/1:0,22:22:66.21:818,66,0	1/1:0,12:12:18.01:203,18,0
chr10	27430830	.	AT	A	11104.04	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-3.148;DP=500;FS=0.000;HRun=9;HaplotypeScore=50.2101;InbreedingCoeff=0.9617;MQ=82.81;MQ0=0;MQRankSum=-7.731;QD=23.68;ReadPosRankSum=4.993;VQSLOD=5.1177;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,14:15:39.02:357,39,0	1/1:3,8:11:21:192,21,0	0/0:21,0:22:45.13:0,45,507	0/0:9,0:7:18.05:0,18,196	1/1:5,30:35:87.03:796,87,0	1/1:4,18:22:54.02:494,54,0	1/1:2,13:15:33.01:302,33,0	1/1:6,21:27:63.01:572,63,0	1/1:0,15:15:45.02:412,45,0	1/1:1,17:18:51.03:467,51,0	1/1:2,31:33:87.03:796,87,0	1/1:0,16:16:42.02:384,42,0	1/1:0,16:16:45.02:412,45,0	1/1:0,21:21:60.03:549,60,0	1/1:1,11:12:33.02:302,33,0	1/1:1,16:17:48.02:439,48,0	1/1:2,19:21:51.03:467,51,0	1/1:1,12:13:36.01:330,36,0	1/1:2,11:13:32.98:291,33,0	1/1:4,28:32:78.02:714,78,0	1/1:0,9:9:15.01:137,15,0	1/1:1,15:16:45.02:412,45,0	1/1:1,22:23:63.03:577,63,0	1/1:1,4:5:12:110,12,0	1/1:1,14:15:39.01:357,39,0	1/1:1,18:19:54.03:494,54,0	1/1:0,25:25:66.04:604,66,0	1/1:0,5:5:15.01:137,15,0
chr10	27431365	.	TACAC	T	2120.52	PASS	AB=0.893;AC=40;AF=0.800;AN=50;BaseQRankSum=1.685;DP=422;FS=25.807;HRun=0;HaplotypeScore=71.9988;InbreedingCoeff=0.2307;MQ=68.21;MQ0=5;MQRankSum=1.712;QD=7.19;ReadPosRankSum=0.681;VQSLOD=0.3177;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	1/1:3,4:7:8.90:129,9,0	./.	./.	1/1:11,10:22:27.05:354,27,0	1/1:16,5:21:3.01:46,3,0	0/1:5,3:8:25.29:40,0,25	0/0:15,0:15:1.82:0,2,5	1/1:12,4:16:2.91:88,3,0	0/0:14,0:14:9.49:0,9,108	0/1:9,2:11:37.55:38,0,43	1/1:12,5:17:9.03:139,9,0	0/1:13,0:13:34.86:61,0,35	1/1:13,4:17:9.03:139,9,0	0/0:22,0:25:20.81:0,21,370	1/1:6,1:7:3.01:46,3,0	1/1:14,8:22:18.06:277,18,0	1/1:10,0:10:2.45:45,2,0	1/1:9,1:9:6.02:87,6,0	1/1:4,2:6:6.02:93,6,0	1/1:13,0:13:3.01:45,3,0	1/1:10,4:15:9.02:120,9,0	0/1:9,0:9:0:0,0,0	1/1:17,5:22:6.02:92,6,0	1/1:8,0:8:2.99:24,3,0	1/1:15,0:15:2.97:21,3,0	1/1:7,8:15:12.04:185,12,0	1/1:6,5:11:12.04:185,12,0
chr10	27433798	.	A	AG	23336.30	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-0.239;DP=614;FS=0.588;HRun=1;HaplotypeScore=99.0632;InbreedingCoeff=0.9983;MQ=88.96;MQ0=0;MQRankSum=-10.752;QD=41.01;ReadPosRankSum=6.397;VQSLOD=4.2735;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,18:20:54.18:809,54,0	1/1:0,10:10:24.08:360,24,0	0/0:23,0:23:66.21:0,66,841	0/0:21,0:22:63.06:0,63,750	1/1:3,24:27:52.07:904,52,0	1/1:0,30:30:81.27:1214,81,0	1/1:1,20:21:57.02:822,57,0	1/1:0,26:26:75.23:1078,75,0	1/1:1,26:27:72.24:1079,72,0	1/1:2,29:31:93.31:1381,93,0	1/1:1,22:23:66.22:980,66,0	1/1:0,15:15:45.15:673,45,0	1/1:0,18:18:51.17:764,51,0	1/1:1,15:16:39:578,39,0	1/1:2,26:28:75.19:1095,75,0	1/1:0,14:14:42.14:629,42,0	1/1:0,16:16:45.15:673,45,0	1/1:1,13:14:36.59:532,37,0	1/1:0,18:18:54.18:809,54,0	1/1:1,23:24:69.19:996,69,0	1/1:0,27:27:75.25:1121,75,0	1/1:3,19:22:57.19:853,57,0	1/1:1,30:31:87.21:1273,87,0	1/1:0,28:28:81.27:1213,81,0	1/1:0,19:19:54.18:808,54,0	1/1:1,28:29:87.23:1258,87,0	1/1:0,26:26:69.23:1033,69,0	1/1:2,7:9:27.09:401,27,0
chr10	27433899	.	GC	G	19475.44	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-2.488;DP=524;FS=0.878;HRun=1;HaplotypeScore=54.9478;InbreedingCoeff=0.9905;MQ=76.85;MQ0=0;MQRankSum=-7.381;QD=38.64;ReadPosRankSum=4.286;VQSLOD=5.2344;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,11:11:27.09:377,27,0	1/1:0,17:17:42.14:587,42,0	0/0:10,0:10:15.93:0,16,401	0/0:10,0:10:30.10:0,30,449	1/1:0,40:40:99:1590,114,0	1/1:0,18:18:51.17:707,51,0	1/1:0,13:13:36.12:503,36,0	1/1:0,27:27:81.23:1111,81,0	1/1:0,18:18:54.18:755,54,0	1/1:0,24:24:69.21:946,69,0	1/1:0,23:23:57.19:797,57,0	1/1:0,17:17:51.17:713,51,0	1/1:0,17:17:45.15:629,45,0	1/1:0,12:12:33.11:462,33,0	1/1:0,23:23:63.21:881,63,0	1/1:0,14:14:39.13:546,39,0	1/1:0,13:13:36.12:503,36,0	1/1:0,8:8:24.08:330,24,0	1/1:0,16:16:48.16:670,48,0	1/1:0,34:34:90.30:1259,90,0	1/1:0,10:10:27.09:378,27,0	1/1:0,22:22:51.17:713,51,0	1/1:0,22:22:60.20:839,60,0	1/1:0,16:16:42.14:587,42,0	1/1:0,22:22:60.20:839,60,0	1/1:0,19:19:57.17:779,57,0	1/1:0,36:36:99:1468,105,0	1/1:0,12:12:36.12:503,36,0
chr10	27435107	.	TA	T	4534.19	PASS	AB=0.610;AC=47;AF=0.839;AN=56;BaseQRankSum=2.046;DP=430;FS=6.220;HRun=14;HaplotypeScore=49.9496;InbreedingCoeff=0.1772;MQ=73.06;MQ0=0;MQRankSum=-0.790;QD=11.22;ReadPosRankSum=4.091;VQSLOD=4.3867;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,5:9:7.81:46,8,0	1/1:1,5:6:11.89:82,12,0	0/0:16,0:12:2.99:0,3,23	0/0:9,0:5:4.20:0,4,23	1/1:6,17:24:43.47:291,43,0	0/1:6,11:19:18.68:169,0,19	1/1:1,6:7:0.65:103,1,0	1/1:8,22:32:33.77:350,34,0	1/1:7,9:16:20.71:144,21,0	1/1:11,14:25:44.43:310,44,0	1/1:6,21:28:40.29:393,40,0	1/1:2,1:4:5:26,5,0	1/1:8,11:20:34.65:232,35,0	0/1:4,7:11:0.71:120,0,1	1/1:3,5:8:14.82:103,15,0	1/1:2,7:9:20.79:144,21,0	1/1:2,4:7:5:26,5,0	0/1:3,10:13:4.05:120,0,4	1/1:8,5:13:17.75:123,18,0	1/1:5,16:22:15.04:244,15,0	1/1:4,9:13:23.75:164,24,0	1/1:5,5:11:13.89:88,14,0	1/1:5,14:20:15.50:244,16,0	0/1:4,4:8:31.01:64,0,31	1/1:5,13:19:34.64:230,35,0	0/1:6,10:16:37.22:167,0,37	1/1:6,16:22:13.75:239,14,0	1/1:5,16:22:46.63:313,47,0
chr10	27435785	.	CT	C	10765.03	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-0.745;DP=417;FS=2.828;HRun=6;HaplotypeScore=46.5106;InbreedingCoeff=0.8956;MQ=86.02;MQ0=0;MQRankSum=-7.995;QD=27.74;ReadPosRankSum=4.304;VQSLOD=5.0676;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,14:14:39.10:419,39,0	1/1:1,10:11:27.07:290,27,0	0/0:13,0:14:19.99:0,20,332	0/0:14,1:15:38.86:0,39,473	1/1:2,14:16:42.10:451,42,0	1/1:0,29:29:84.21:902,84,0	1/1:0,8:8:24.06:258,24,0	1/1:3,23:26:69.13:724,69,0	1/1:2,15:17:42.11:451,42,0	1/1:0,16:16:48.11:508,48,0	1/1:0,19:19:51.13:548,51,0	1/1:0,19:19:51.13:548,51,0	1/1:2,15:17:39.01:419,39,0	1/1:0,12:12:30.08:322,30,0	1/1:2,14:16:42.11:451,42,0	1/1:2,13:15:39.10:419,39,0	1/1:0,3:3:6.02:64,6,0	1/1:1,5:6:15.04:161,15,0	1/1:5,18:23:54.13:580,54,0	1/1:1,6:7:12.03:129,12,0	1/1:1,8:9:24.06:258,24,0	1/1:1,11:12:33.08:355,33,0	1/1:0,15:15:39.10:419,39,0	1/1:1,12:13:36.09:387,36,0	1/1:3,12:15:33.08:355,33,0	1/1:4,18:22:51.11:540,51,0	1/1:1,24:25:66.17:709,66,0	1/1:0,3:3:9.02:97,9,0
chr10	27436339	.	C	CTAT	2542	PASS	AB=0.667;AC=37;AF=0.925;AN=40;BaseQRankSum=-2.342;DP=138;FS=6.284;HRun=0;HaplotypeScore=20.6732;InbreedingCoeff=0.1122;MQ=69.98;MQ0=1;MQRankSum=1.021;QD=20.50;ReadPosRankSum=-0.420;VQSLOD=1.8500;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,1:2:3.01:59,3,0	./.	1/1:4,0:3:0.47:1,0,0	./.	1/1:3,1:4:3.01:59,3,0	1/1:5,2:7:6.02:118,6,0	1/1:1,1:2:3.01:59,3,0	1/1:16,9:26:30.08:486,30,0	./.	1/1:2,1:3:3.01:59,3,0	1/1:1,2:3:6.02:118,6,0	1/1:5,1:6:3.01:59,3,0	1/1:2,4:7:15.05:295,15,0	1/1:2,1:3:6.02:115,6,0	0/0:3,0:3:3.01:0,3,41	./.	1/1:3,6:9:10.02:340,10,0	0/1:4,4:8:31.87:107,0,32	1/1:4,0:6:6.02:79,6,0	./.	./.	1/1:0,0:2:3.01:39,3,0	./.	./.	1/1:1,2:3:3.01:59,3,0	1/1:4,2:6:6.02:118,6,0	1/1:4,4:9:12.04:236,12,0	1/1:6,8:14:12.04:235,12,0
chr10	27439131	.	TTGTG	T	465.55	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.526;DP=461;FS=1.405;HRun=0;HaplotypeScore=71.0186;InbreedingCoeff=0.9784;MQ=79.98;MQ0=0;MQRankSum=-0.225;QD=33.25;ReadPosRankSum=1.446;VQSLOD=3.5215;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:39.13:0,39,1011	0/0:8,0:8:24.07:0,24,585	0/0:15,0:15:45.15:0,45,1070	0/0:8,0:8:18.06:0,18,458	0/0:27,0:27:81.28:0,81,2159	0/0:20,0:20:54.19:0,54,1440	0/0:9,0:9:24.08:0,24,609	0/0:36,0:36:99:0,99,2639	0/0:21,0:21:63.22:0,63,1673	0/0:15,0:15:45.15:0,45,1167	0/0:17,0:17:51.18:0,51,1353	0/0:11,0:11:33.11:0,33,880	0/0:14,0:14:42.13:0,42,1052	0/0:13,0:13:39.13:0,39,1039	1/1:3,11:14:30.10:560,30,0	0/0:13,0:13:39.13:0,39,1004	0/0:17,0:17:45.15:0,45,1105	0/0:14,0:14:36.10:0,36,902	0/0:31,0:31:87.30:0,87,2260	0/0:25,0:25:75.26:0,75,1994	0/0:14,0:14:42.14:0,42,1112	0/0:11,0:11:30.10:0,30,794	0/0:12,0:12:33.11:0,33,880	0/0:16,0:16:39.12:0,39,984	0/0:14,0:14:42.14:0,42,1120	0/0:24,0:24:72.25:0,72,1921	0/0:21,0:21:63.22:0,63,1674	0/0:6,0:6:18.06:0,18,480
chr10	27440259	.	GTC	G	1323.69	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-7.189;DP=744;FS=8.968;HRun=0;HaplotypeScore=135.7242;InbreedingCoeff=0.8066;MQ=56.15;MQ0=26;MQRankSum=2.751;QD=42.70;ReadPosRankSum=1.810;VQSLOD=4.4747;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:38:99:0,106,2040	0/0:19,0:19:57.18:0,57,1104	0/0:9,0:1:3.01:0,3,61	0/0:12,0:3:8.98:0,9,101	0/0:39,0:39:99:0,114,2277	0/0:21,0:21:63.17:0,63,1239	0/0:16,0:16:48.16:0,48,945	0/0:39,0:24:72.22:0,72,1340	0/0:29,0:29:81.25:0,81,1572	0/0:32,0:32:96.32:0,96,1918	0/0:29,0:29:87.26:0,87,1679	0/0:32,0:32:96.33:0,96,1939	0/0:23,0:23:69.23:0,69,1318	0/0:31,0:31:93.31:0,93,1849	1/1:0,31:31:87.30:1418,87,0	0/0:24,0:24:72.23:0,72,1426	0/0:31,0:31:93.19:0,93,1766	0/0:25,0:25:75.20:0,75,1416	0/0:28,0:23:66.17:0,66,1225	0/0:35,0:35:99:0,105,2094	0/0:20,0:20:57.20:0,57,1142	0/0:31,0:31:93.31:0,93,1854	0/0:32,0:32:96.29:0,96,1861	0/0:14,0:14:36.12:0,36,731	0/0:26,0:25:75.26:0,75,1521	0/0:31,0:31:93.31:0,93,1855	0/0:39,0:39:99:0,117,2302	0/0:7,0:7:21.05:0,21,389
chr10	27442217	.	T	TAACA	1217.57	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.590;DP=658;FS=4.860;HRun=0;HaplotypeScore=103.4757;InbreedingCoeff=0.9042;MQ=82.27;MQ0=0;MQRankSum=-5.794;QD=60.88;ReadPosRankSum=-0.465;VQSLOD=5.2320;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:54.19:0,54,971	0/0:11,0:11:27.09:0,27,481	0/0:21,0:21:57.19:0,57,975	0/0:15,0:15:33.11:0,33,570	0/0:34,0:34:87.30:0,87,1543	0/0:28,0:28:78.25:0,78,1368	0/0:15,0:15:42.13:0,42,719	0/0:32,0:32:90.29:0,90,1565	0/0:20,0:20:57.20:0,57,1025	0/0:27,0:27:72.25:0,72,1281	0/0:21,0:21:54.13:0,54,908	0/0:26,0:26:75.24:0,75,1306	0/0:29,0:29:69.23:0,69,1240	0/0:20,0:20:51.17:0,51,917	1/1:2,18:20:51.18:1312,51,0	0/0:19,0:19:51.17:0,51,907	0/0:23,0:23:63.19:0,63,1101	0/0:3,0:3:6.02:0,6,108	0/0:25,0:25:72.25:0,72,1277	0/0:31,0:31:81.23:0,81,1422	0/0:24,0:24:66.23:0,66,1186	0/0:28,0:28:66.21:0,66,1150	0/0:25,0:25:69.19:0,69,1206	0/0:20,0:20:51.13:0,51,860	0/0:32,0:32:96.33:0,96,1717	0/0:28,0:28:78.27:0,78,1390	0/0:44,0:44:99:0,123,2176	0/0:17,0:17:42.14:0,42,755
chr10	27442937	.	GCACATATATATA	G	484.42	PASS	AB=0.933;AC=16;AF=0.308;AN=52;BaseQRankSum=3.386;DP=140;FS=0.000;HRun=0;HaplotypeScore=57.4948;InbreedingCoeff=0.2230;MQ=77.31;MQ0=3;MQRankSum=-3.582;QD=8.35;ReadPosRankSum=1.746;VQSLOD=0.9549;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:3,0:3:2.99:0,3,23	1/1:1,0:1:3.01:77,3,0	0/0:10,0:7:8.93:0,9,84	0/0:26,0:12:12.59:0,13,126	0/1:9,0:9:0:0,0,0	0/0:5,0:6:7.36:0,7,75	0/0:2,0:2:0.47:0,0,1	0/0:18,0:17:28.88:0,29,211	0/1:2,0:2:3.57:4,0,30	0/0:2,0:2:0.47:0,0,1	0/1:3,0:3:5.46:5,0,67	./.	0/0:3,0:3:0:0,0,0	0/0:3,0:3:5.98:0,6,49	./.	0/0:1,0:1:0:0,0,0	0/1:4,0:4:4.65:88,0,5	1/1:9,0:9:1.90:65,2,0	1/1:5,0:5:4.19:154,4,0	1/1:7,0:7:0.62:2,1,0	0/0:2,0:2:0.47:0,0,1	0/0:1,0:1:0:0,0,0	0/0:2,0:2:0:0,0,0	0/0:2,0:2:0.47:0,0,1	0/0:1,0:1:0:0,0,0	0/1:3,0:3:29.95:67,0,30	0/1:3,5:9:20.30:50,0,20	1/1:6,0:6:5.81:89,6,0
chr10	27442938	.	CACATATATATATAT	C	1593.59	PASS	AB=0.883;AC=36;AF=0.720;AN=50;BaseQRankSum=-3.559;DP=139;FS=8.455;HRun=0;HaplotypeScore=56.5866;InbreedingCoeff=0.1172;MQ=77.25;MQ0=4;MQRankSum=0.082;QD=16.77;ReadPosRankSum=-1.783;VQSLOD=0.0248;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	1/1:0,1:1:3.01:129,3,0	0/0:10,0:7:8.37:0,8,61	0/0:26,0:12:8.70:0,9,71	0/1:0,9:9:0:0,0,0	0/1:6,0:6:15.62:37,0,16	1/1:2,0:2:5.99:49,6,0	0/1:18,0:17:30.30:190,0,30	0/0:2,0:2:0.47:0,0,1	1/1:2,0:2:6.01:56,6,0	0/1:3,0:3:39.86:40,0,42	./.	1/1:3,0:3:5.99:50,6,0	0/0:3,0:3:3.01:0,3,38	./.	1/1:1,0:1:3:25,3,0	0/1:3,0:4:9.73:118,0,10	0/1:9,0:9:18.34:104,0,18	1/1:0,5:5:15.01:334,15,0	1/1:6,0:7:14.11:104,14,0	1/1:2,0:2:5.99:49,6,0	1/1:1,0:1:3:25,3,0	1/1:2,0:2:5.99:50,6,0	1/1:2,0:2:5.99:48,6,0	1/1:1,0:1:3:26,3,0	1/1:1,1:2:2.99:129,3,0	1/1:9,0:9:6.47:39,6,0	1/1:0,5:6:3.48:130,3,0
chr10	27443581	.	T	TA	84.83	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.482;DP=500;FS=1.365;HRun=8;HaplotypeScore=49.2679;InbreedingCoeff=0.8168;MQ=79.43;MQ0=0;MQRankSum=0.479;QD=9.43;ReadPosRankSum=-0.485;VQSLOD=1.0159;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:12.43:0,12,227	0/0:8,0:8:24.01:0,24,220	0/0:12,0:12:4.90:0,5,138	0/0:13,0:13:13.68:0,14,179	0/0:23,0:23:62.86:0,63,576	0/0:24,0:24:60.02:0,60,549	0/0:6,0:6:18.01:0,18,164	0/0:36,0:36:96.05:0,96,879	0/0:24,0:24:63.03:0,63,577	0/0:27,0:27:72.03:0,72,659	0/0:29,0:29:78.04:0,78,714	0/0:12,0:12:36:0,36,324	0/0:11,0:11:27.01:0,27,247	0/0:8,0:8:21.01:0,21,192	1/1:3,6:9:15.04:173,15,0	0/0:22,0:22:57.01:0,57,521	0/0:14,0:14:39.02:0,39,357	0/0:19,0:19:57.01:0,57,515	0/0:19,0:19:51.02:0,51,467	0/0:33,0:33:93.05:0,93,851	0/0:11,0:11:30.02:0,30,275	0/0:25,0:25:63.03:0,63,577	0/0:16,0:16:42.02:0,42,384	0/0:9,0:9:21.01:0,21,192	0/0:20,0:20:48:0,48,439	0/0:21,0:21:63.03:0,63,577	0/0:28,0:27:72.03:0,72,659	0/0:9,0:9:24.01:0,24,219
chr10	27444973	.	TAA	T	3767.25	PASS	AC=50;AF=0.926;AN=54;BaseQRankSum=-2.623;DP=390;FS=14.191;HRun=4;HaplotypeScore=85.7356;InbreedingCoeff=0.6964;MQ=49.27;MQ0=33;MQRankSum=1.536;QD=13.22;ReadPosRankSum=5.048;VQSLOD=-0.4365;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:20:38.97:252,39,0	./.	0/0:70,0:13:30.77:0,31,410	0/0:35,0:7:4.53:0,5,100	1/1:15,0:15:28.55:201,29,0	1/1:11,0:10:26.98:192,27,0	1/1:7,0:7:10.48:48,10,0	1/1:15,1:13:27.25:150,27,0	1/1:8,1:9:18.18:114,18,0	1/1:10,1:11:27.84:205,28,0	1/1:15,2:17:35.52:203,36,0	1/1:11,0:11:18.07:96,18,0	1/1:10,0:10:19.66:91,20,0	1/1:4,0:4:8.29:26,8,0	1/1:5,0:5:11.27:44,11,0	1/1:5,0:5:10.36:70,10,0	1/1:10,0:9:14.03:100,14,0	1/1:21,0:19:46.70:396,47,0	1/1:22,0:12:20.48:176,20,0	1/1:17,1:17:39.61:232,40,0	1/1:10,0:8:19.41:130,19,0	1/1:2,0:2:5.60:37,6,0	1/1:12,0:12:26.98:211,27,0	1/1:3,0:3:4.54:27,5,0	1/1:12,2:14:34.32:241,34,0	1/1:10,1:11:28.80:279,29,0	1/1:10,0:10:9.35:112,9,0	1/1:7,0:7:17.86:134,18,0
chr10	27444974	.	A	AT	5183.11	PASS	AC=50;AF=0.926;AN=54;BaseQRankSum=-3.051;DP=392;FS=13.828;HRun=12;HaplotypeScore=76.6608;InbreedingCoeff=0.8345;MQ=49.19;MQ0=33;MQRankSum=1.192;QD=18.06;ReadPosRankSum=4.399;VQSLOD=4.8023;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:22,1:20:52.26:368,52,0	./.	0/0:70,0:13:32.41:0,32,305	0/0:35,0:7:13.21:0,13,89	1/1:16,0:16:41.98:290,42,0	1/1:11,0:10:29.46:223,29,0	1/1:7,0:7:16.18:86,16,0	1/1:15,1:13:29.53:223,30,0	1/1:10,0:10:23.21:162,23,0	1/1:9,2:11:29.69:246,30,0	1/1:16,1:17:46.13:322,46,0	1/1:10,1:11:26.93:149,27,0	1/1:10,0:10:26.98:148,27,0	1/1:4,0:4:11.19:52,11,0	1/1:0,5:5:15.05:227,15,0	1/1:5,0:5:11.69:85,12,0	1/1:10,0:9:19.75:135,20,0	1/1:20,1:19:55.19:487,55,0	1/1:22,0:12:20.64:181,21,0	1/1:18,0:17:46.68:313,47,0	1/1:7,3:8:23.68:234,24,0	1/1:2,0:2:5.91:44,6,0	1/1:11,1:12:32.43:263,32,0	1/1:4,0:3:5.89:39,6,0	1/1:14,0:14:37.99:260,38,0	1/1:10,1:11:32.67:285,33,0	1/1:10,0:10:27.81:196,28,0	1/1:6,1:7:17.97:164,18,0
chr10	27445963	.	T	TC	76.64	PASS	AB=0.966;AC=6;AF=0.130;AN=46;BaseQRankSum=3.666;DP=928;FS=2.406;HRun=0;HaplotypeScore=16.0401;InbreedingCoeff=-0.0186;MQ=11.99;MQ0=610;MQRankSum=-2.773;QD=0.54;ReadPosRankSum=2.702;VQSLOD=0.7623;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:7:17.94:0,18,203	./.	./.	./.	0/0:51,0:3:5.92:0,6,39	0/1:38,1:7:34.92:35,0,70	./.	./.	0/1:30,1:4:34.64:35,0,91	0/0:43,0:3:9.02:0,9,110	0/0:45,0:3:8.90:0,9,60	0/1:15,1:3:13.95:41,0,14	0/0:20,0:4:11.95:0,12,123	0/0:30,0:2:5.92:0,6,39	1/1:5,1:1:3.01:47,3,0	0/0:32,0:5:15.05:0,15,208	0/0:40,0:6:3.01:0,3,42	0/0:25,0:1:3.01:0,3,42	0/0:21,0:3:9.03:0,9,125	0/0:62,0:5:8.94:0,9,82	0/0:47,0:3:9.03:0,9,125	0/0:51,0:4:11.91:0,12,101	0/0:44,0:4:5.98:0,6,62	0/0:29,0:7:8.89:0,9,77	0/0:32,0:2:3.01:0,3,42	0/0:41,0:4:12.02:0,12,149	0/1:49,1:5:31.29:31,0,130	0/0:21,0:2:6.02:0,6,84
chr10	27446813	.	AT	A	266.53	PASS	AC=10;AF=0.833;AN=12;DP=252;FS=0.000;HRun=1;HaplotypeScore=9.3529;MQ=8.67;MQ0=205;QD=4.10;VQSLOD=0.0934;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	1/1:3,8:7:3.01:42,3,0	./.	./.	./.	./.	./.	1/1:3,7:6:6.02:84,6,0	./.	./.	./.	./.	./.	./.	./.	./.	1/1:12,8:7:6.02:84,6,0	./.	1/1:3,9:4:6.02:84,6,0	./.	./.	1/1:8,4:3:3.01:42,3,0	0/0:12,1:1:0:0,0,0	./.	./.
chr10	27451368	.	AG	A	323.97	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.108;DP=518;FS=2.311;HRun=5;HaplotypeScore=79.3051;InbreedingCoeff=0.9889;MQ=70.78;MQ0=0;MQRankSum=-0.414;QD=23.14;ReadPosRankSum=0.076;VQSLOD=2.4892;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,102,1364	0/0:11,0:11:18.06:0,18,245	0/0:15,0:15:44.39:0,44,531	0/0:19,0:18:38.02:0,38,492	0/0:25,0:25:63.20:0,63,842	0/0:16,0:16:45.13:0,45,584	0/0:11,0:11:27.09:0,27,366	0/0:27,0:27:75.25:0,75,1026	0/0:25,0:25:72.24:0,72,982	0/0:14,0:14:42.14:0,42,567	0/0:18,0:18:48.16:0,48,654	0/0:20,0:20:57.19:0,57,778	0/0:21,0:21:63.15:0,63,820	0/0:13,0:13:39.12:0,39,518	1/1:0,14:14:39.06:419,39,0	0/0:15,0:15:42.13:0,42,559	0/0:22,0:22:63.14:0,63,820	0/0:9,0:9:27.09:0,27,369	0/0:12,0:12:33.07:0,33,430	0/0:27,0:27:75.24:0,75,1007	0/0:17,0:17:51.16:0,51,681	0/0:12,0:12:29.96:0,30,346	0/0:18,0:18:42.14:0,42,572	0/0:14,0:14:39.09:0,39,500	0/0:18,0:18:51.17:0,51,696	0/0:27,0:27:78.26:0,78,1065	0/0:24,0:24:72.21:0,72,946	0/0:18,0:18:51.13:0,51,661
chr10	27451519	.	G	GA	17641.32	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=7.135;DP=522;FS=0.660;HRun=1;HaplotypeScore=156.9215;InbreedingCoeff=0.9792;MQ=79.39;MQ0=0;MQRankSum=-9.595;QD=36.15;ReadPosRankSum=5.116;VQSLOD=4.3041;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,21:24:63:768,63,0	1/1:0,10:10:30.10:411,30,0	0/0:21,0:21:59.85:0,60,722	0/0:13,0:13:39.13:0,39,506	1/1:2,24:25:68.95:830,69,0	1/1:1,18:19:54.18:733,54,0	1/1:1,6:7:18.95:249,19,0	1/1:0,24:24:72.21:936,72,0	1/1:1,24:25:72.12:934,72,0	1/1:0,23:23:69.23:940,69,0	1/1:1,25:26:72.07:908,72,0	1/1:0,9:9:27.09:361,27,0	1/1:1,21:22:63.09:817,63,0	1/1:2,9:11:27.04:347,27,0	1/1:2,22:24:60.13:796,60,0	1/1:0,13:13:39.13:528,39,0	1/1:3,15:18:46.40:619,46,0	1/1:0,5:5:15.05:207,15,0	1/1:6,11:17:41.97:495,42,0	1/1:0,31:31:93.06:1211,93,0	1/1:0,18:18:51.10:677,51,0	1/1:0,17:17:48.05:615,48,0	1/1:1,17:18:45.15:618,45,0	1/1:1,12:13:36.03:471,36,0	1/1:0,23:23:69.23:951,69,0	1/1:2,28:30:80.75:1033,81,0	1/1:1,26:27:72.24:979,72,0	1/1:0,8:8:15.05:209,15,0
chr10	27451644	.	C	CTAGAG	18047.14	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=7.917;DP=502;FS=8.915;HRun=0;HaplotypeScore=191.0854;InbreedingCoeff=0.9021;MQ=64.88;MQ0=0;MQRankSum=-10.556;QD=40.02;ReadPosRankSum=6.069;VQSLOD=3.8956;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,7:13:18.06:404,18,0	1/1:4,6:10:23.66:492,24,0	0/0:29,0:29:84.21:0,84,1657	0/0:22,0:22:63.22:0,63,1260	1/1:10,13:23:43.02:974,43,0	1/1:3,10:13:30.57:739,31,0	1/1:6,7:13:24.95:541,25,0	1/1:15,0:15:17.17:136,17,0	1/1:8,8:16:27.08:614,27,0	1/1:17,8:25:45.26:851,45,0	1/1:18,11:29:48.10:926,48,0	1/1:4,16:20:48.16:1172,48,0	1/1:12,10:22:45.39:840,45,0	1/1:5,8:13:30.09:684,30,0	1/1:8,11:19:39.11:858,39,0	1/1:11,13:24:47.50:1016,48,0	1/1:5,6:11:26.94:501,27,0	1/1:1,4:5:12.51:300,13,0	1/1:4,4:7:12.07:306,12,0	1/1:12,12:24:42.13:931,42,0	1/1:7,2:9:8.99:167,9,0	1/1:13,11:24:44.42:921,44,0	1/1:8,10:18:30.10:731,30,0	1/1:5,3:8:8.96:163,9,0	1/1:7,12:19:42.12:935,42,0	1/1:17,13:30:57.61:1150,58,0	1/1:15,15:31:60.80:1283,61,0	1/1:4,5:9:19.37:411,19,0
chr10	27451646	.	C	CATCAGA	30179.68	PASS	AB=0.714;AC=38;AF=0.679;AN=56;BaseQRankSum=4.784;DP=599;FS=7.688;HRun=0;HaplotypeScore=262.7677;InbreedingCoeff=-0.1101;MQ=58.40;MQ0=0;MQRankSum=-13.478;QD=54.87;ReadPosRankSum=11.692;VQSLOD=3.1789;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:12,7:19:20.24:704,20,0	0/1:8,5:14:97.02:730,0,97	0/0:28,0:28:84.29:0,84,2042	0/0:21,0:21:60.21:0,60,1506	1/1:16,13:29:19.42:1424,19,0	0/1:8,10:18:3.84:1023,0,4	1/1:10,7:17:15.33:961,15,0	0/1:25,0:25:99:1377,0,180	1/1:12,8:20:10.85:1206,11,0	0/1:21,8:29:99:1448,0,140	0/1:20,11:31:72.15:1264,0,72	1/1:5,16:21:51.17:1460,51,0	0/1:11,10:21:99:1238,0,158	0/1:8,8:16:6.66:773,0,7	0/1:12,11:23:11.27:1202,0,11	0/1:12,13:25:48.45:1313,0,48	0/1:9,6:15:70.41:870,0,70	1/1:1,4:5:12.51:364,13,0	1/1:11,4:14:29.34:764,29,0	0/1:17,12:29:67.57:1402,0,68	1/1:11,2:13:18.04:472,18,0	1/1:18,12:30:17.37:1471,17,0	1/1:13,10:23:39.13:1132,39,0	1/1:5,3:8:17.80:455,18,0	0/1:10,12:22:83.82:1373,0,84	1/1:23,13:36:74.52:2637,75,0	0/1:18,16:34:1.05:2439,0,1	0/1:7,5:12:46.48:677,0,46
chr10	27454578	.	C	CA	397.83	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-5.891;DP=377;FS=2.536;HRun=4;HaplotypeScore=34.1868;InbreedingCoeff=0.8957;MQ=77.88;MQ0=0;MQRankSum=-0.593;QD=30.60;ReadPosRankSum=-0.085;VQSLOD=2.9310;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:30.07:0,30,329	0/0:7,0:7:18.05:0,18,204	0/0:10,0:10:24.05:0,24,259	0/0:8,0:8:17.79:0,18,204	0/0:28,0:28:81.23:0,81,919	0/0:11,0:11:30.07:0,30,329	0/0:9,0:9:27.08:0,27,306	0/0:19,0:19:54.15:0,54,613	0/0:6,0:6:18.05:0,18,204	0/0:15,0:15:42.12:0,42,476	0/0:22,0:22:60.17:0,60,680	0/0:11,0:11:33.09:0,33,374	0/0:11,0:11:27.08:0,27,306	0/0:7,0:7:18.05:0,18,204	1/1:0,13:13:36.12:493,36,0	0/0:10,0:10:30.09:0,30,340	0/0:17,0:17:45.13:0,45,510	0/0:9,0:9:23.80:0,24,250	0/0:15,0:15:45.12:0,45,503	0/0:27,0:27:75.20:0,75,841	0/0:6,0:6:15.04:0,15,170	0/0:3,0:3:9.03:0,9,102	0/0:10,0:10:30.07:0,30,331	0/0:10,0:10:30.09:0,30,340	0/0:11,0:10:33.09:0,33,374	0/0:23,0:23:66.18:0,66,742	0/0:31,0:31:93.27:0,93,1054	0/0:17,0:17:51.15:0,51,579
chr10	27455226	.	CA	C	17313.81	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-1.400;DP=545;FS=9.499;HRun=3;HaplotypeScore=75.1844;InbreedingCoeff=0.9875;MQ=72.33;MQ0=0;MQRankSum=-4.027;QD=34.35;ReadPosRankSum=4.724;VQSLOD=5.0021;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,31:31:84.26:1041,84,0	1/1:0,5:5:15.05:186,15,0	0/0:15,0:13:32.78:0,33,364	0/0:12,0:12:32.89:0,33,416	1/1:0,31:31:90.28:1115,90,0	1/1:0,33:33:90.28:1116,90,0	1/1:0,7:7:15.05:186,15,0	1/1:1,27:28:81.25:1004,81,0	1/1:0,14:14:42.13:520,42,0	1/1:1,24:25:69.22:855,69,0	1/1:0,31:31:87.27:1079,87,0	1/1:0,9:9:24.08:298,24,0	1/1:0,15:15:42.13:521,42,0	1/1:1,12:13:33.10:409,33,0	0/0:14,0:14:39.12:0,39,544	1/1:1,12:13:33.10:409,33,0	1/1:1,12:13:36.11:446,36,0	1/1:0,15:15:39.12:483,39,0	1/1:1,15:16:45.14:557,45,0	1/1:0,25:25:75.24:930,75,0	1/1:0,23:23:66.21:818,66,0	1/1:1,23:24:60.19:744,60,0	1/1:1,27:28:72.23:893,72,0	1/1:0,13:13:39.12:484,39,0	1/1:1,28:29:78.25:967,78,0	1/1:1,20:21:60.17:729,60,0	1/1:0,23:23:66.21:818,66,0	1/1:0,19:19:57.18:707,57,0
chr10	27456083	.	T	TACACACACAC	4609.52	PASS	AC=52;AF=1.000;AN=52;BaseQRankSum=-1.402;DP=401;FS=0.000;HRun=0;HaplotypeScore=136.6797;InbreedingCoeff=0.0399;MQ=54.28;MQ0=8;MQRankSum=0.866;QD=12.49;ReadPosRankSum=1.650;VQSLOD=3.7134;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:23:2.31:23,2,0	1/1:6,0:6:3.01:67,3,0	./.	./.	1/1:20,0:20:14.10:213,14,0	1/1:21,0:21:9.50:235,10,0	1/1:15,0:15:5.89:74,6,0	1/1:20,0:20:5.99:50,6,0	1/1:15,0:14:9.02:133,9,0	1/1:11,0:10:18.01:388,18,0	1/1:15,0:15:5.95:120,6,0	1/1:7,0:7:0.08:0,0,0	1/1:11,0:11:11.47:286,11,0	1/1:10,0:10:2.57:84,3,0	1/1:14,0:14:17.60:250,18,0	1/1:12,0:12:15.52:476,16,0	1/1:9,2:15:10.30:293,10,0	1/1:10,0:10:5.99:108,6,0	1/1:18,0:17:12.51:339,13,0	1/1:20,0:19:20.45:400,20,0	1/1:10,0:9:3.01:75,3,0	1/1:15,0:15:5.60:124,6,0	1/1:10,1:14:5.85:169,6,0	1/1:8,0:8:6.02:147,6,0	1/1:19,0:19:12:170,12,0	1/1:16,0:15:7.73:70,8,0	1/1:9,0:13:5.51:99,6,0	1/1:8,0:8:9.01:216,9,0
chr10	27457798	.	TTGA	T	5472.31	PASS	AC=52;AF=0.963;AN=54;BaseQRankSum=-0.111;DP=348;FS=2.080;HRun=0;HaplotypeScore=319.1469;InbreedingCoeff=0.5321;MQ=32.67;MQ0=9;MQRankSum=-1.086;QD=16.19;ReadPosRankSum=0.374;VQSLOD=3.8609;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,6:6:14.50:84,15,0	1/1:2,8:10:29.56:214,30,0	0/0:5,0:1:3.01:0,3,47	./.	1/1:2,25:27:66.17:352,66,0	1/1:1,8:9:23.60:149,24,0	1/1:2,9:11:26.39:156,26,0	1/1:3,4:4:11.96:97,12,0	1/1:2,12:13:30.20:161,30,0	1/1:1,10:12:33.69:308,34,0	1/1:0,20:20:54.02:277,54,0	1/1:1,9:10:26.37:155,26,0	1/1:0,15:15:43.63:253,44,0	1/1:0,14:13:37.56:205,38,0	1/1:0,9:9:21.14:136,21,0	1/1:0,8:8:23.61:151,24,0	1/1:3,3:5:8.48:46,8,0	1/1:0,4:5:14.28:98,14,0	1/1:0,7:5:15.02:146,15,0	1/1:0,29:29:84.39:479,84,0	1/1:1,2:3:6.37:41,6,0	1/1:0,17:17:46.38:240,46,0	1/1:3,24:27:71.16:423,71,0	1/1:0,3:3:4.61:18,5,0	1/1:0,24:24:70.60:432,71,0	1/1:0,12:12:35.82:286,36,0	1/1:1,19:20:18.92:297,19,0	1/1:0,12:13:35.80:270,36,0
chr10	27457803	.	A	ATGG	13181.76	PASS	AC=52;AF=0.963;AN=54;BaseQRankSum=-0.288;DP=404;FS=5.790;HRun=0;HaplotypeScore=396.2887;InbreedingCoeff=0.6257;MQ=31.10;MQ0=9;MQRankSum=-0.969;QD=33.46;ReadPosRankSum=0.891;VQSLOD=4.0547;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,6:8:13.31:201,13,0	1/1:1,8:9:27.04:325,27,0	0/0:5,0:1:3.01:0,3,56	./.	1/1:5,25:30:76.14:883,76,0	1/1:4,8:12:36.07:475,36,0	1/1:1,9:10:30.10:418,30,0	1/1:6,4:6:16.03:208,16,0	1/1:5,12:16:48.11:574,48,0	1/1:5,10:15:42:629,42,0	1/1:5,20:25:63.14:698,63,0	1/1:1,9:10:30.09:356,30,0	1/1:4,15:19:51.15:618,51,0	1/1:5,14:18:54.07:642,54,0	1/1:3,9:12:32.93:395,33,0	1/1:5,8:13:33.06:428,33,0	1/1:3,3:4:12.04:150,12,0	1/1:2,4:6:18.03:225,18,0	1/1:5,7:9:21.06:307,21,0	1/1:3,29:32:93.23:1127,93,0	1/1:0,2:2:6.01:62,6,0	1/1:4,17:21:60.02:745,60,0	1/1:2,24:26:72.18:888,72,0	1/1:2,3:5:12:128,12,0	1/1:2,24:26:72.22:890,72,0	1/1:2,12:14:42.14:603,42,0	1/1:3,19:22:48.73:719,49,0	1/1:1,12:13:36.12:486,36,0
chr10	27457821	.	CTGG	C	15106.22	PASS	AC=50;AF=0.962;AN=52;BaseQRankSum=1.337;DP=330;FS=2.835;HRun=0;HaplotypeScore=358.6183;InbreedingCoeff=0.4989;MQ=34.45;MQ0=10;MQRankSum=-1.403;QD=47.21;ReadPosRankSum=0.233;VQSLOD=3.4247;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,6:6:18.06:255,18,0	1/1:0,8:8:24.08:423,24,0	0/0:5,0:2:0.26:0,0,66	./.	1/1:0,23:23:51.14:792,51,0	1/1:0,10:10:30.10:513,30,0	1/1:0,8:8:24.08:407,24,0	1/1:3,5:5:12.04:199,12,0	1/1:0,13:13:39.13:637,39,0	1/1:0,16:16:48.16:846,48,0	1/1:0,19:19:48.16:825,48,0	1/1:0,8:8:24.08:423,24,0	1/1:0,18:19:57.20:999,57,0	1/1:0,18:17:51.17:863,51,0	1/1:0,9:9:24.08:391,24,0	1/1:0,13:13:39.13:671,39,0	1/1:1,4:3:6.91:91,7,0	1/1:2,4:6:15.04:207,15,0	1/1:0,10:8:24.08:423,24,0	1/1:0,27:27:81.27:1377,81,0	./.	1/1:0,16:16:48.16:845,48,0	1/1:0,19:19:57.19:983,57,0	1/1:0,4:4:6.90:155,7,0	1/1:0,21:21:60.21:1057,60,0	1/1:0,12:12:36.12:634,36,0	1/1:0,14:14:42.14:723,42,0	1/1:1,7:8:21.07:368,21,0
chr10	27459603	.	TAC	T	394	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.508;DP=514;FS=6.497;HRun=0;HaplotypeScore=116.0030;InbreedingCoeff=0.9496;MQ=85.85;MQ0=1;MQRankSum=-0.139;QD=39.40;ReadPosRankSum=1.672;VQSLOD=5.3981;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:63.22:0,63,1264	0/0:15,0:15:45.15:0,45,911	0/0:16,0:17:48.15:0,48,926	0/0:27,0:25:57.03:0,57,1088	0/0:19,0:19:54.19:0,54,1094	0/0:22,0:22:42.14:0,42,827	0/0:8,0:8:15.05:0,15,304	0/0:22,0:22:66.22:0,66,1291	0/0:14,0:14:36.11:0,36,730	0/0:18,0:18:54.17:0,54,1037	0/0:27,0:27:72.23:0,72,1408	0/0:10,0:10:27.09:0,27,546	0/0:15,0:15:36.12:0,36,730	0/0:20,0:20:48.16:0,48,959	1/1:0,10:10:30.10:488,30,0	0/0:18,0:18:45.15:0,45,912	0/0:20,0:20:39.12:0,39,790	0/0:8,0:7:21.07:0,21,426	0/0:22,0:22:66.20:0,66,1257	0/0:24,0:24:60.21:0,60,1215	0/0:11,0:11:30.10:0,30,608	0/0:12,0:12:36.10:0,36,658	0/0:25,0:25:47.73:0,48,972	0/0:4,0:4:12.04:0,12,243	0/0:15,0:15:42.12:0,42,814	0/0:38,0:38:99:0,108,2161	0/0:31,0:31:86.95:0,87,1664	0/0:14,0:13:42.14:0,42,852
chr10	27459632	.	CTTTTTTTT	C	12616.22	PASS	AB=0.685;AC=50;AF=0.893;AN=56;BaseQRankSum=-2.899;DP=492;FS=4.402;HRun=20;HaplotypeScore=138.2675;InbreedingCoeff=0.5337;MQ=66.89;MQ0=14;MQRankSum=-1.558;QD=30.18;ReadPosRankSum=4.897;VQSLOD=0.1733;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,11:15:17.71:362,18,0	1/1:1,13:15:36.07:728,36,0	0/0:39,0:13:14.28:0,14,171	0/0:31,0:19:21.48:0,21,236	1/1:4,10:16:18.78:311,19,0	1/1:4,13:17:20.77:440,21,0	1/1:1,10:11:21.05:427,21,0	1/1:9,7:16:14.23:311,14,0	1/1:3,9:12:20.36:389,20,0	1/1:7,10:17:26.28:554,26,0	1/1:4,17:22:50.92:923,51,0	1/1:0,9:10:24.08:471,24,0	1/1:4,10:15:18.64:478,19,0	1/1:2,13:16:26.88:516,27,0	1/1:5,7:13:23.64:408,24,0	1/1:3,13:16:32.97:684,33,0	1/1:6,16:23:18.06:362,18,0	0/1:7,3:9:14.40:115,0,14	1/1:11,2:14:7.96:225,8,0	0/1:9,17:27:15.73:813,0,16	1/1:5,0:7:5.86:88,6,0	1/1:1,10:11:30.03:574,30,0	1/1:7,16:23:23.16:440,23,0	1/1:3,2:4:6.02:124,6,0	1/1:4,14:19:24.26:593,24,0	1/1:9,23:32:68.48:1373,68,0	1/1:10,13:23:32.47:655,32,0	1/1:4,7:10:11.88:252,12,0
chr10	27459698	.	A	AT	304.08	PASS	AC=2;AF=0.037;AN=54;BaseQRankSum=-1.752;DP=502;FS=12.371;HRun=9;HaplotypeScore=81.8799;InbreedingCoeff=0.7581;MQ=61.50;MQ0=1;MQRankSum=0.568;QD=16.89;ReadPosRankSum=-0.495;VQSLOD=2.4486;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:29.99:0,30,260	0/0:14,0:14:35.97:0,36,308	0/0:8,0:10:13.08:0,13,127	0/0:3,0:3:3:0,3,26	0/0:28,0:28:74.97:0,75,650	0/0:17,0:17:38.97:0,39,335	0/0:9,0:9:11.98:0,12,104	0/0:31,0:31:71.93:0,72,618	0/0:14,0:13:38.99:0,39,338	0/0:28,0:28:74.96:0,75,644	0/0:27,0:27:53.97:0,54,469	0/0:8,0:8:11.98:0,12,104	0/0:18,0:17:44.99:0,45,390	0/0:18,0:18:44.99:0,45,390	1/1:6,12:18:36.10:398,36,0	0/0:9,0:9:20.99:0,21,182	0/0:21,0:21:47.95:0,48,409	0/0:11,0:11:20.99:0,21,182	0/0:20,0:20:13.45:0,13,332	0/0:31,0:31:77.89:0,78,668	./.	0/0:25,0:25:59.91:0,60,512	0/0:29,0:29:83.98:0,84,729	0/0:10,0:10:20.99:0,21,182	0/0:22,0:22:47.98:0,48,416	0/0:33,0:33:92.92:0,93,797	0/0:19,0:19:41.97:0,42,364	0/0:12,0:12:14.98:0,15,130
chr10	27460089	.	T	TA	4705.49	PASS	AB=0.715;AC=42;AF=0.750;AN=56;BaseQRankSum=-5.649;DP=470;FS=3.756;HRun=14;HaplotypeScore=56.1716;InbreedingCoeff=-0.2944;MQ=58.97;MQ0=3;MQRankSum=1.266;QD=10.01;ReadPosRankSum=-0.475;VQSLOD=4.0405;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:8,31:38:27.01:405,0,27	1/1:1,4:5:9:79,9,0	0/1:20,0:10:4.95:5,0,33	0/1:7,0:5:10.67:11,0,11	0/1:10,13:24:27.73:266,0,28	1/1:4,8:14:6.53:182,7,0	0/1:4,9:13:11.54:158,0,12	1/1:12,21:33:40.64:467,41,0	0/1:9,9:18:33.79:108,0,34	0/1:9,9:18:7.48:142,0,7	1/1:6,14:20:18.50:242,18,0	1/1:5,7:12:17.84:146,18,0	1/1:8,7:16:20.84:172,21,0	0/1:5,6:11:30.01:131,0,30	1/1:9,0:9:6.49:37,6,0	1/1:6,7:13:18:158,18,0	0/1:10,10:21:52.11:233,0,52	1/1:3,12:15:10.77:218,11,0	1/1:10,9:19:5.16:156,5,0	1/1:7,18:25:9.41:323,9,0	1/1:4,3:7:14.97:125,15,0	0/1:6,4:10:7.27:67,0,7	1/1:5,8:13:6:167,6,0	0/1:8,8:16:8.54:181,0,9	0/1:4,9:13:17.54:111,0,18	1/1:7,13:20:19.69:288,20,0	0/1:15,7:22:6.28:112,0,6	0/1:12,0:12:13.28:16,0,13
chr10	27466505	.	TA	T	3830.28	PASS	AB=0.647;AC=45;AF=0.804;AN=56;BaseQRankSum=-3.336;DP=352;FS=6.532;HRun=14;HaplotypeScore=44.0401;InbreedingCoeff=0.1765;MQ=58.64;MQ0=13;MQRankSum=-0.726;QD=11.37;ReadPosRankSum=2.520;VQSLOD=3.2174;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:9,5:13:9.11:50,9,0	1/1:0,5:5:14.87:103,15,0	0/0:6,0:3:5.48:0,5,31	0/0:8,0:5:8.66:0,9,53	1/1:8,10:16:16.98:196,17,0	1/1:2,8:10:23.75:164,24,0	0/1:4,5:8:29.30:65,0,29	1/1:13,12:21:32.57:226,33,0	1/1:7,12:19:41.57:285,42,0	1/1:7,16:23:28.41:311,28,0	1/1:7,13:18:13.76:239,14,0	1/1:0,7:7:14.87:103,15,0	0/1:5,1:5:14.58:15,0,22	1/1:1,5:7:13.94:88,14,0	1/1:2,0:2:1.81:5,2,0	1/1:2,10:12:22.86:150,23,0	0/1:5,5:8:13.86:54,0,14	1/1:1,8:11:18.95:114,19,0	1/1:1,9:9:23.72:162,24,0	0/1:6,13:18:7.65:206,0,8	1/1:4,1:5:11.85:79,12,0	1/1:3,5:7:14.87:103,15,0	0/1:3,12:15:16.98:187,0,17	0/1:5,4:9:1.72:82,0,2	0/1:1,6:7:6.98:102,0,7	1/1:4,10:15:28.74:191,29,0	1/1:7,13:20:35.59:245,36,0	1/1:4,12:15:44.61:307,45,0
chr10	27468586	.	T	TA	2088.54	PASS	AB=0.862;AC=18;AF=0.321;AN=56;BaseQRankSum=11.106;DP=541;FS=9.705;HRun=0;HaplotypeScore=166.3760;InbreedingCoeff=-0.4741;MQ=58.06;MQ0=1;MQRankSum=-10.234;QD=5.37;ReadPosRankSum=-5.797;VQSLOD=1.4487;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:24.08:0,24,333	0/0:10,0:10:5.66:0,6,33	0/0:18,0:14:32.21:0,32,441	0/0:11,0:10:21.07:0,21,294	0/1:27,5:32:64.07:64,0,884	0/1:17,0:17:0.44:0,0,440	0/1:7,3:8:77.05:77,0,150	0/0:35,0:35:96.29:0,96,1322	0/1:13,9:22:99:368,0,401	0/1:33,6:39:99:290,0,1098	0/1:18,4:22:99:160,0,491	0/1:14,0:14:35.37:35,0,111	0/0:15,0:15:19.36:0,19,221	0/1:14,4:18:99:146,0,414	0/0:23,0:23:54.18:0,54,754	0/1:16,0:16:11.85:12,0,304	0/1:12,1:13:60.55:61,0,308	0/1:7,2:9:93.13:93,0,147	0/0:20,0:20:57.10:0,57,726	0/1:28,4:32:99:105,0,877	0/0:2,0:2:6.02:0,6,84	0/1:5,1:6:29.64:30,0,192	0/1:17,6:23:99:221,0,549	0/0:6,0:6:8.95:0,9,126	0/1:17,9:26:99:275,0,467	0/1:24,3:27:96.17:96,0,844	0/1:38,4:42:70.74:71,0,1332	0/1:16,5:21:99:141,0,338
chr10	27468594	.	AAAT	A	800.09	PASS	AB=0.964;AC=16;AF=0.286;AN=56;BaseQRankSum=11.410;DP=534;FS=5.213;HRun=0;HaplotypeScore=182.2541;InbreedingCoeff=-0.3208;MQ=57.14;MQ0=1;MQRankSum=-7.998;QD=2.65;ReadPosRankSum=1.047;VQSLOD=2.5114;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:8:18.01:0,18,307	1/1:11,0:11:0.88:2,1,0	0/0:22,0:16:44.86:0,45,861	0/0:13,0:12:29.84:0,30,615	0/0:30,0:30:4.50:0,4,1022	0/0:18,0:18:15.40:0,15,770	0/1:10,0:8:26.50:26,0,242	0/0:34,0:34:43.76:0,44,1876	0/1:20,0:20:99:154,0,387	0/1:35,2:37:99:165,0,1817	0/1:21,0:21:59.74:60,0,641	0/1:17,0:17:10.83:11,0,176	0/0:15,0:15:8.96:0,9,229	0/1:15,1:16:27.77:28,0,451	0/0:24,0:24:60.18:0,60,1280	0/1:17,0:17:3.46:3,0,373	0/0:11,1:12:29.23:0,29,447	0/1:9,1:10:91.89:92,0,265	0/1:21,0:21:61.16:61,0,1032	0/1:30,1:31:6.54:7,0,1130	0/0:5,0:5:6.02:0,6,148	0/0:6,1:7:1.24:0,1,251	0/1:18,1:19:78.35:78,0,529	0/0:6,0:6:8.94:0,9,114	0/1:23,0:23:99:138,0,504	0/1:28,0:27:56.38:56,0,1395	0/0:38,0:38:12.72:0,13,1714	0/1:15,6:21:65.26:65,0,625
chr10	27468597	.	T	TA	2433.26	PASS	AB=0.803;AC=17;AF=0.304;AN=56;BaseQRankSum=9.845;DP=520;FS=2.932;HRun=3;HaplotypeScore=161.7150;InbreedingCoeff=-0.4846;MQ=55.02;MQ0=1;MQRankSum=-7.514;QD=6.78;ReadPosRankSum=1.403;VQSLOD=0.7327;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:6:11.99:0,12,136	0/0:11,0:11:2.59:0,3,11	0/0:21,0:14:41.95:0,42,537	0/0:13,0:12:30.04:0,30,369	0/1:20,8:28:76.43:76,0,506	0/0:18,0:18:2.80:0,3,422	0/1:8,3:9:92.32:92,0,123	0/0:26,5:31:9.91:0,10,923	0/1:9,14:23:99:399,0,161	0/1:28,8:36:99:319,0,978	0/1:15,6:21:99:181,0,314	0/1:17,0:17:29.72:30,0,91	0/0:14,0:14:13.85:0,14,143	0/1:10,6:16:99:140,0,228	0/0:22,0:22:51.15:0,51,622	0/1:17,0:17:12.86:13,0,188	0/0:11,2:13:18.09:0,18,223	0/1:5,5:10:99:181,0,139	0/1:19,0:19:78.57:79,0,533	0/1:21,8:29:99:108,0,548	0/0:3,3:6:6.02:0,6,84	0/1:5,1:6:32.65:33,0,112	0/1:14,6:20:99:215,0,279	0/0:6,0:6:2.93:0,3,42	0/1:9,15:24:99:331,0,246	0/1:21,6:26:99:153,0,742	0/1:28,6:34:98.51:99,0,838	0/1:15,6:21:99:138,0,338
chr10	27468598	.	T	TATAGATAGATAGATAGATAG	23715.61	PASS	AB=1.000;AC=48;AF=0.889;AN=54;BaseQRankSum=-6.267;DP=574;FS=2.035;HRun=0;HaplotypeScore=266.7240;InbreedingCoeff=0.4442;MQ=53.76;MQ0=1;MQRankSum=-5.295;QD=45.35;ReadPosRankSum=0.458;VQSLOD=3.6089;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,0:10:9.03:461,9,0	1/1:0,11:14:2.97:279,3,0	0/0:22,0:14:9:0,9,250	0/1:12,0:11:8.27:8,0,217	1/1:29,0:29:21.06:727,21,0	1/1:11,7:20:9.03:837,9,0	1/1:12,0:10:21.07:901,21,0	1/1:36,0:36:54.18:1064,54,0	1/1:24,0:24:39.12:1704,39,0	1/1:37,0:37:75.25:3162,75,0	1/1:22,0:22:18.06:726,18,0	1/1:7,14:27:6.02:558,6,0	1/1:5,10:21:6.02:557,6,0	1/1:16,0:16:18.02:792,18,0	0/0:22,0:22:48.16:0,48,1041	1/1:5,12:19:9.03:837,9,0	0/1:13,0:13:99:364,0,101	1/1:10,0:10:15.05:494,15,0	1/1:14,9:28:43.38:1685,43,0	1/1:31,0:31:21.07:885,21,0	./.	1/1:6,0:6:3.01:164,3,0	1/1:21,0:21:27.09:1144,27,0	1/1:6,0:6:6.02:208,6,0	1/1:24,0:24:36.12:1706,36,0	1/1:28,0:27:57.20:2005,57,0	1/1:34,0:34:42.14:1376,42,0	1/1:23,0:23:27.09:1070,27,0
chr10	27468603	.	A	ATAGG	1891.63	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=5.717;DP=589;FS=3.202;HRun=0;HaplotypeScore=209.1323;InbreedingCoeff=-0.2219;MQ=52.65;MQ0=1;MQRankSum=-2.000;QD=4.83;ReadPosRankSum=7.653;VQSLOD=1.9590;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:11,0:11:37.27:66,0,37	1/1:14,0:14:3.01:34,3,0	0/0:22,0:14:35.44:0,35,406	0/0:12,0:11:13.14:0,13,216	0/0:31,0:31:11.37:0,11,196	0/1:18,0:18:76.61:77,0,122	0/1:14,0:12:42.40:46,0,42	0/1:38,0:38:71.83:72,0,476	0/1:24,0:24:1.05:1,0,75	0/1:35,0:35:65.87:66,0,231	0/1:21,0:21:64.89:65,0,96	0/1:28,0:28:44.73:45,0,128	0/1:21,0:21:15.97:61,0,16	0/0:19,0:19:7.96:0,8,96	1/1:1,20:21:48.16:1294,48,0	0/1:22,0:22:76.39:76,0,127	0/1:12,0:12:6.93:37,0,7	0/0:9,0:9:3.75:0,4,61	0/1:29,0:29:17.93:18,0,292	0/0:29,0:29:28.85:0,29,213	0/0:7,0:7:5.99:0,6,49	0/0:7,0:7:13.21:0,13,100	0/1:21,0:21:0.53:1,0,89	0/0:7,0:7:2.21:0,2,19	0/0:24,0:24:31.12:0,31,208	0/1:30,0:29:43.88:44,0,202	0/1:33,0:33:47.09:47,0,188	0/0:30,0:30:24.66:0,25,295
chr10	27468626	.	G	GA	2545.21	PASS	AB=0.772;AC=17;AF=0.304;AN=56;BaseQRankSum=1.281;DP=583;FS=2.167;HRun=1;HaplotypeScore=174.5681;InbreedingCoeff=-0.4723;MQ=55.43;MQ0=0;MQRankSum=-5.650;QD=6.24;ReadPosRankSum=-2.058;VQSLOD=-0.1173;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:7,2:9:22.56:23,0,114	0/0:9,0:9:1.41:0,1,77	0/0:15,0:11:33.11:0,33,460	0/0:14,0:14:27.08:0,27,346	0/1:20,11:31:99:126,0,340	0/0:15,0:15:5.16:0,5,230	0/1:10,4:12:23.94:24,0,243	0/1:34,11:45:99:410,0,1047	0/1:22,5:27:36.52:37,0,646	0/1:19,12:31:99:564,0,464	0/1:15,7:22:37.22:37,0,328	0/0:17,0:17:3.89:0,4,155	0/0:17,0:17:5.88:0,6,196	0/1:15,7:22:25.15:25,0,459	0/0:25,0:25:65.63:0,66,502	0/0:21,0:21:19.26:0,19,441	0/1:10,3:13:89.78:90,0,145	0/1:6,2:8:97.84:98,0,179	0/0:23,0:23:61.53:0,62,877	0/1:20,10:30:8.85:9,0,444	0/0:9,1:10:14.94:0,15,209	0/0:8,1:9:18.06:0,18,251	0/1:14,9:23:99:103,0,377	0/1:8,4:12:35.33:35,0,114	0/1:18,4:22:8.84:9,0,459	0/1:18,13:30:99:525,0,615	0/1:18,17:35:99:430,0,487	0/1:27,6:33:99:155,0,859
chr10	27468632	.	A	AG	1024.49	PASS	AB=0.805;AC=8;AF=0.143;AN=56;BaseQRankSum=4.223;DP=591;FS=1.357;HRun=0;HaplotypeScore=174.5971;InbreedingCoeff=-0.1674;MQ=61.42;MQ0=0;MQRankSum=-7.063;QD=5.12;ReadPosRankSum=-1.046;VQSLOD=2.9731;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:11,1:12:7.44:7,0,229	0/0:9,0:9:14.99:0,15,170	0/0:18,0:14:39.09:0,39,521	0/0:15,0:15:30.10:0,30,419	0/1:20,8:28:29.17:29,0,439	0/0:18,0:18:36.06:0,36,449	0/0:11,3:12:27:0,27,333	0/0:37,2:39:6.61:0,7,1247	0/0:23,4:27:54.18:0,54,754	0/1:19,11:30:99:443,0,628	0/0:18,4:22:6.36:0,6,470	0/0:17,0:17:21:0,21,237	0/0:18,0:18:30.05:0,30,381	0/1:16,7:23:5.67:6,0,503	0/0:27,0:27:78.26:0,78,1091	0/0:23,0:23:48.11:0,48,617	0/0:12,2:14:25.58:0,26,301	0/1:7,1:8:9.11:9,0,211	0/0:26,0:26:72.22:0,72,989	0/0:21,9:30:42.10:0,42,565	0/0:11,0:11:18:0,18,230	0/0:8,1:9:21.07:0,21,294	0/0:15,6:21:13.54:0,14,477	0/0:10,2:12:15.59:0,16,188	0/0:19,2:21:45.06:0,45,571	0/1:22,10:31:99:394,0,742	0/1:19,13:32:99:171,0,612	0/1:30,5:35:94.97:95,0,1070
chr10	27470021	.	AAGAGTACATAT	A	37779.78	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=3.817;DP=530;FS=3.260;HRun=0;HaplotypeScore=189.0514;InbreedingCoeff=0.9614;MQ=48.55;MQ0=1;MQRankSum=-7.371;QD=77.58;ReadPosRankSum=4.919;VQSLOD=4.9251;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,35:35:66.23:2397,66,0	1/1:0,9:9:20.99:687,21,0	0/0:22,0:17:51.08:0,51,1778	0/0:21,0:17:48.12:0,48,2130	1/1:0,14:14:30.10:1049,30,0	1/1:0,21:21:45.15:1672,45,0	1/1:0,6:6:12.04:445,12,0	1/1:0,27:27:78.03:1897,78,0	1/1:0,20:20:57.20:2118,57,0	1/1:0,28:28:81.05:2402,81,0	1/1:0,18:18:48.10:1689,48,0	1/1:0,19:19:45.15:1672,45,0	1/1:0,24:24:63.22:2340,63,0	1/1:0,17:17:39.13:1449,39,0	1/1:3,19:22:66.21:2329,66,0	1/1:0,15:15:36.12:1337,36,0	1/1:0,14:14:18.06:669,18,0	1/1:3,9:12:36.05:1157,36,0	1/1:0,24:24:69:1389,69,0	1/1:0,20:20:45.04:1484,45,0	1/1:0,17:17:27.09:947,27,0	1/1:0,18:18:42.14:1548,42,0	1/1:1,23:23:32.39:1166,32,0	1/1:0,15:15:15.05:556,15,0	1/1:0,19:19:30.10:1067,30,0	1/1:1,23:24:69.19:2213,69,0	1/1:0,18:18:42.14:1561,42,0	1/1:3,4:7:15.05:539,15,0
chr10	27470134	.	G	GA	19519.70	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=0.991;DP=693;FS=10.307;HRun=7;HaplotypeScore=104.8417;InbreedingCoeff=0.9985;MQ=86.53;MQ0=0;MQRankSum=-10.612;QD=30.93;ReadPosRankSum=5.848;VQSLOD=3.3552;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,59:63:99:1723,144,0	1/1:0,11:11:33.10:398,33,0	0/0:37,0:37:84:0,84,777	0/0:25,0:25:51.05:0,51,484	1/1:3,30:33:90.26:1075,90,0	1/1:3,15:18:48.11:563,48,0	1/1:2,15:17:42.13:507,42,0	1/1:0,20:20:57.16:672,57,0	1/1:0,24:24:66.20:795,66,0	1/1:3,22:25:66.19:786,66,0	1/1:1,25:26:78.24:941,78,0	1/1:0,22:22:63.19:758,63,0	1/1:6,19:25:66.12:763,66,0	1/1:3,19:22:57.17:687,57,0	1/1:1,25:26:72.22:870,72,0	1/1:3,22:25:63.19:758,63,0	1/1:5,26:30:49.29:876,49,0	1/1:3,24:27:66.20:797,66,0	1/1:4,23:27:69.18:809,69,0	1/1:2,24:26:72.19:852,72,0	1/1:1,24:25:57.17:689,57,0	1/1:4,17:21:25.19:587,25,0	1/1:2,23:25:66.20:797,66,0	1/1:2,18:20:48.15:580,48,0	1/1:0,21:21:63.19:761,63,0	1/1:5,14:19:42.12:496,42,0	1/1:2,19:21:54.17:652,54,0	1/1:2,9:11:27.08:326,27,0
chr10	27472062	.	CATAT	C	15350.62	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-2.442;DP=475;FS=6.685;HRun=0;HaplotypeScore=93.0545;InbreedingCoeff=0.6723;MQ=58.14;MQ0=0;MQRankSum=-0.651;QD=33.37;ReadPosRankSum=1.467;VQSLOD=4.6451;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,14:20:27.09:466,27,0	1/1:0,11:11:30.10:518,30,0	0/0:9,0:9:0.41:0,0,46	0/0:6,0:4:3.01:0,3,50	1/1:2,16:18:42.14:698,42,0	1/1:3,12:15:33.11:570,33,0	1/1:1,4:5:6.02:104,6,0	1/1:14,14:28:42.10:609,42,0	1/1:4,6:10:15.05:259,15,0	1/1:5,22:27:63.20:1049,63,0	1/1:3,19:22:27.09:467,27,0	1/1:4,12:16:27.09:467,27,0	1/1:1,14:15:33.11:556,33,0	1/1:3,13:16:36.12:622,36,0	1/1:3,19:22:45.15:778,45,0	1/1:3,17:20:42.14:726,42,0	1/1:2,13:15:30.10:518,30,0	1/1:4,12:16:33.11:570,33,0	1/1:3,14:17:42.14:718,42,0	1/1:2,22:24:60.12:945,60,0	1/1:3,21:24:39.13:661,39,0	1/1:4,14:18:27.56:468,28,0	1/1:1,15:16:29.93:518,30,0	1/1:3,12:15:24.08:415,24,0	1/1:2,14:16:33.11:570,33,0	1/1:2,16:19:51.17:835,51,0	1/1:4,19:23:39.13:674,39,0	1/1:1,11:12:33.11:570,33,0
chr10	27472176	.	G	GTT	12640.99	PASS	AB=0.583;AC=49;AF=0.875;AN=56;BaseQRankSum=5.804;DP=556;FS=12.083;HRun=7;HaplotypeScore=124.8000;InbreedingCoeff=0.7708;MQ=61.53;MQ0=8;MQRankSum=-2.148;QD=27.13;ReadPosRankSum=0.353;VQSLOD=3.1941;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,0:31:84.03:969,84,0	1/1:2,0:11:28.80:345,29,0	0/0:40,0:14:13.85:0,14,259	0/0:22,0:9:3.55:0,4,53	1/1:19,0:40:96.72:1157,97,0	1/1:2,0:17:40.67:467,41,0	1/1:6,0:8:21.02:230,21,0	1/1:2,0:42:87.69:1061,88,0	0/1:2,0:7:2.55:214,0,3	1/1:2,0:24:60.18:747,60,0	1/1:1,1:25:66.12:797,66,0	1/1:7,0:13:26.96:290,27,0	1/1:4,0:11:24.55:311,25,0	1/1:0,0:9:12.04:150,12,0	0/0:26,0:26:72.21:0,72,837	1/1:5,0:15:35.82:410,36,0	1/1:5,0:21:56.38:645,56,0	1/1:6,0:10:5.27:141,5,0	1/1:3,1:20:48.13:599,48,0	1/1:4,2:27:69.60:854,70,0	1/1:0,0:11:14.96:175,15,0	1/1:0,1:12:24.08:306,24,0	1/1:0,0:9:21.07:270,21,0	1/1:6,0:17:29.39:294,29,0	1/1:1,2:27:53.36:622,53,0	1/1:5,0:20:54.05:696,54,0	1/1:8,0:21:54.13:655,54,0	1/1:1,0:10:20.85:235,21,0
chr10	27472184	.	G	GGT	6257.31	PASS	AB=0.693;AC=43;AF=0.768;AN=56;BaseQRankSum=3.013;DP=550;FS=0.818;HRun=0;HaplotypeScore=139.9953;InbreedingCoeff=0.0930;MQ=63.60;MQ0=9;MQRankSum=-6.652;QD=13.23;ReadPosRankSum=7.257;VQSLOD=4.4018;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:11,0:32:31.16:582,0,31	1/1:2,0:12:26.75:243,27,0	0/0:50,0:19:9.02:0,9,339	0/1:25,0:11:4.74:5,0,49	0/1:20,1:41:3.07:454,0,3	1/1:6,1:17:32.89:326,33,0	0/1:2,0:8:1.65:136,0,2	0/1:19,0:33:73.92:332,0,74	0/1:2,0:7:7.62:112,0,8	1/1:10,0:22:12.67:302,13,0	1/1:9,0:23:0.52:338,1,0	1/1:6,0:11:15:161,15,0	1/1:5,0:12:16.71:153,17,0	1/1:5,0:8:0.44:48,0,0	0/0:26,0:26:75.22:0,75,1127	1/1:3,1:15:26.30:270,26,0	1/1:8,0:22:35.53:345,36,0	1/1:5,0:10:5.28:118,5,0	1/1:7,0:20:36.54:304,37,0	1/1:14,0:27:30.08:389,30,0	1/1:4,0:9:13.45:124,13,0	0/1:7,0:9:27.64:61,0,28	0/1:6,0:8:46.34:80,0,46	0/1:9,0:20:2.12:140,0,2	1/1:9,0:25:19.83:390,20,0	1/1:6,0:20:16.69:329,17,0	1/1:4,0:19:30.67:403,31,0	1/1:4,0:10:1.66:113,2,0
chr10	27473831	.	GTTA	G	10520.03	PASS	AC=52;AF=0.963;AN=54;BaseQRankSum=-2.638;DP=378;FS=2.153;HRun=0;HaplotypeScore=60.5931;InbreedingCoeff=0.5324;MQ=69.49;MQ0=0;MQRankSum=-1.251;QD=28.82;ReadPosRankSum=2.741;VQSLOD=5.0258;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,6:7:18.06:263,18,0	1/1:2,5:7:15.05:219,15,0	./.	0/0:7,0:7:8.84:0,9,129	1/1:2,29:31:74.91:968,75,0	1/1:1,16:17:39.13:571,39,0	1/1:1,5:6:9.03:132,9,0	1/1:9,27:36:81.26:1151,81,0	1/1:1,7:8:18.06:263,18,0	1/1:0,15:15:45.11:619,45,0	1/1:9,20:29:57.12:769,57,0	1/1:2,9:11:21.07:307,21,0	1/1:5,11:16:27.09:395,27,0	1/1:5,13:18:33.11:465,33,0	1/1:2,12:14:30.10:430,30,0	1/1:2,8:10:21.07:307,21,0	1/1:3,13:16:24.08:351,24,0	1/1:3,10:13:24.08:351,24,0	1/1:8,9:17:27.08:375,27,0	1/1:3,14:17:42.05:569,42,0	1/1:1,1:2:3.01:44,3,0	1/1:4,1:5:3.01:44,3,0	1/1:3,7:10:6.02:88,6,0	1/1:0,2:2:6.02:88,6,0	1/1:2,10:12:24.08:342,24,0	1/1:2,8:10:24.05:328,24,0	1/1:5,18:23:42.14:596,42,0	1/1:2,11:13:33.11:483,33,0
chr10	27474905	.	A	AGTCTCT	13536.58	PASS	AB=0.633;AC=48;AF=0.889;AN=54;BaseQRankSum=-1.617;DP=776;FS=17.441;HRun=0;HaplotypeScore=287.9038;InbreedingCoeff=0.5254;MQ=63.40;MQ0=1;MQRankSum=-1.367;QD=21.59;ReadPosRankSum=5.458;VQSLOD=3.2005;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:28,9:36:12.04:233,12,0	1/1:5,2:7:6.02:113,6,0	0/0:52,0:38:44.28:0,44,645	0/0:72,0:45:7.49:0,7,238	1/1:13,11:24:18.05:473,18,0	1/1:15,9:23:14.96:388,15,0	1/1:19,4:23:2.42:23,2,0	1/1:38,0:38:70.12:1673,70,0	1/1:21,10:31:33.11:758,33,0	1/1:18,2:21:39.03:914,39,0	1/1:14,6:20:6.02:118,6,0	1/1:15,11:26:21.02:559,21,0	1/1:20,8:29:21.06:571,21,0	1/1:27,9:36:9.03:265,9,0	0/1:11,22:33:0:0,0,0	1/1:15,12:27:27.09:881,27,0	1/1:13,6:19:12.04:347,12,0	1/1:6,4:10:12.04:305,12,0	1/1:11,13:26:51.06:1279,51,0	1/1:18,6:24:20.91:578,21,0	1/1:16,4:20:9.03:199,9,0	./.	1/1:18,9:26:9.02:186,9,0	1/1:21,10:31:3.01:99,3,0	0/1:13,13:26:4.89:115,0,5	1/1:17,12:29:63.19:1867,63,0	1/1:20,14:35:42.14:1297,42,0	1/1:4,0:4:9.03:296,9,0
chr10	27474926	.	CTGCA	C	4105.13	PASS	AB=0.906;AC=25;AF=0.446;AN=56;BaseQRankSum=-6.788;DP=813;FS=40.149;HRun=0;HaplotypeScore=320.5569;InbreedingCoeff=-0.6968;MQ=60.46;MQ0=2;MQRankSum=0.104;QD=6.83;ReadPosRankSum=-2.946;VQSLOD=1.4650;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:35,1:35:99:194,0,674	0/1:4,4:8:73.32:104,0,73	0/0:64,1:39:91.75:0,92,2078	0/0:100,0:50:56.99:0,57,1011	0/1:23,1:24:99:200,0,405	0/1:26,2:27:99:191,0,290	0/1:23,1:24:17.94:18,0,78	0/1:26,13:39:99:909,0,1265	0/1:30,4:34:99:391,0,520	0/1:16,2:18:99:212,0,639	0/1:16,4:20:99:101,0,316	0/1:25,1:26:83.58:84,0,607	0/1:23,2:25:99:180,0,512	0/1:27,7:34:99:102,0,264	0/0:25,0:25:2.32:0,2,83	0/1:21,5:26:99:102,0,663	0/1:18,2:20:53.36:53,0,322	0/1:12,0:12:50.97:51,0,305	0/1:23,0:23:99:210,0,1060	0/1:23,2:25:99:271,0,351	0/1:21,2:23:75.73:76,0,446	0/0:20,0:20:8.74:0,9,251	0/1:25,2:26:99:135,0,440	0/1:30,3:33:24.12:24,0,599	0/1:22,1:23:34.98:35,0,324	0/1:30,5:35:99:294,0,1409	0/1:33,1:34:13.49:13,0,1405	1/1:4,0:4:9.03:154,9,0
chr10	27474934	.	G	GCA	152.95	PASS	AB=0.958;AC=9;AF=0.161;AN=56;BaseQRankSum=2.666;DP=847;FS=12.110;HRun=0;HaplotypeScore=336.6735;InbreedingCoeff=-0.2252;MQ=60.94;MQ0=5;MQRankSum=0.119;QD=0.68;ReadPosRankSum=-5.461;VQSLOD=0.1626;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:30.74:0,31,459	0/0:7,0:7:3.48:0,3,50	0/0:83,0:44:88.06:0,88,1379	0/0:110,0:54:39.81:0,40,887	0/1:23,1:24:32.50:32,0,319	0/1:25,0:24:8.93:9,0,233	0/0:25,0:25:5.65:0,6,97	0/1:34,0:34:34.93:35,0,923	0/0:31,0:31:11.77:0,12,453	0/0:17,0:17:3.33:0,3,532	0/0:20,0:20:17.65:0,18,255	0/0:26,0:26:26.74:0,27,418	0/1:23,0:23:21.39:21,0,309	0/0:37,0:37:1.47:0,1,175	0/0:25,0:25:6.02:0,6,92	0/1:28,0:28:23.85:24,0,394	0/0:22,1:23:26.49:0,26,296	0/0:15,0:15:25.78:0,26,382	0/0:23,0:22:51.08:0,51,846	0/1:23,1:24:79.48:79,0,215	0/0:25,0:25:8.41:0,8,279	0/0:18,0:18:9.03:0,9,158	0/0:25,0:24:13.12:0,13,330	0/0:36,1:38:12.79:0,13,529	0/1:25,0:25:0.92:1,0,242	0/1:36,0:36:19.47:19,0,1087	0/0:35,0:35:66.98:0,67,962	0/1:4,3:7:61.83:62,0,163
chr10	27474962	.	CTCTG	C	12989.47	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-1.916;DP=847;FS=11.715;HRun=0;HaplotypeScore=254.8437;InbreedingCoeff=0.6644;MQ=59.41;MQ0=22;MQRankSum=2.523;QD=20.72;ReadPosRankSum=7.527;VQSLOD=3.0896;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:13,26:40:3.63:421,4,0	1/1:1,6:7:15.05:256,15,0	0/0:91,0:30:1.50:0,1,506	0/0:128,0:50:23.54:0,24,732	1/1:6,21:27:17.97:313,18,0	1/1:4,16:20:27.09:469,27,0	1/1:6,23:29:4.66:66,5,0	1/1:7,22:29:51.14:790,51,0	1/1:3,26:29:39.02:676,39,0	1/1:4,14:18:42.14:722,42,0	1/1:1,13:14:15.05:261,15,0	1/1:4,21:25:42.11:709,42,0	1/1:2,22:24:32.85:573,33,0	1/1:5,23:28:26.68:469,27,0	1/1:7,15:22:17.96:313,18,0	1/1:4,25:29:38.98:666,39,0	1/1:8,24:32:35.26:561,35,0	1/1:6,11:18:22.06:410,22,0	1/1:11,10:20:39.12:634,39,0	1/1:5,15:20:9.03:157,9,0	1/1:9,24:33:10.84:401,11,0	1/1:6,10:16:12.04:209,12,0	1/1:4,17:21:18.03:313,18,0	1/1:6,24:30:36.12:626,36,0	1/1:9,14:23:21.07:365,21,0	1/1:7,24:31:72.24:1218,72,0	1/1:7,30:37:69.22:1181,69,0	1/1:0,4:4:12.04:209,12,0
chr10	27474968	.	CTG	C	1594.09	PASS	AB=0.978;AC=34;AF=0.607;AN=56;BaseQRankSum=6.262;DP=821;FS=0.433;HRun=0;HaplotypeScore=264.1140;InbreedingCoeff=-0.3558;MQ=57.97;MQ0=21;MQRankSum=1.437;QD=2.60;ReadPosRankSum=12.407;VQSLOD=0.1921;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:36,5:41:73.26:73,0,74	0/1:8,0:8:24.49:27,0,24	0/0:81,0:27:19.23:0,19,593	0/0:123,1:50:31.42:0,31,982	0/1:28,0:28:31.09:31,0,102	0/1:21,0:21:51.75:52,0,58	1/1:26,0:26:7.67:51,8,0	0/1:27,0:27:59.81:60,0,99	0/1:30,0:30:46.05:81,0,46	0/1:20,0:20:72.51:73,0,125	1/1:14,0:14:12.48:46,12,0	0/1:24,0:24:31.85:75,0,32	0/1:26,0:26:10.06:71,0,10	1/1:28,0:28:11.76:70,12,0	0/1:22,0:22:7.01:37,0,7	0/1:28,0:28:22.18:72,0,22	1/1:27,5:32:28.19:154,28,0	0/1:16,2:18:15.68:125,0,16	0/1:20,0:20:57.59:58,0,63	1/1:17,0:17:7.44:28,7,0	0/1:30,5:35:43.54:47,0,44	1/1:16,0:16:10.46:49,10,0	0/1:18,0:18:24.16:37,0,24	0/1:26,2:28:8.09:77,0,8	1/1:17,0:17:17.47:64,17,0	0/1:28,0:28:13.92:141,0,14	0/1:38,0:38:53.82:128,0,54	1/1:4,0:4:9.98:37,10,0
chr10	27475457	.	C	CT	13736.73	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-8.159;DP=584;FS=4.303;HRun=9;HaplotypeScore=50.2871;InbreedingCoeff=0.9286;MQ=79.70;MQ0=0;MQRankSum=-6.227;QD=24.98;ReadPosRankSum=5.045;VQSLOD=5.2634;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,22:25:60:645,60,0	1/1:4,7:11:21.06:232,21,0	0/0:18,0:18:32.94:0,33,276	0/0:16,0:16:41:0,41,339	1/1:0,26:26:69.15:750,69,0	1/1:0,22:23:63.16:689,63,0	1/1:5,20:25:48.13:531,48,0	1/1:10,23:33:60.06:605,60,0	1/1:5,18:23:28.09:536,28,0	1/1:5,10:15:7.01:295,7,0	1/1:6,24:30:72.19:796,72,0	1/1:4,23:27:60.16:664,60,0	1/1:3,11:14:10.04:339,10,0	1/1:4,15:19:45.10:486,45,0	1/1:5,15:20:45.12:498,45,0	1/1:1,9:10:24.06:265,24,0	1/1:1,14:15:42.11:465,42,0	1/1:0,21:21:60.16:664,60,0	1/1:6,19:26:50.14:602,50,0	1/1:6,21:27:40.08:657,40,0	1/1:3,13:16:36.10:398,36,0	1/1:5,16:21:25.70:475,26,0	1/1:4,18:22:28.09:538,28,0	1/1:3,19:22:45.12:498,45,0	1/1:2,20:22:51.14:564,51,0	1/1:1,21:22:60.16:664,60,0	1/1:3,23:25:60.16:662,60,0	1/1:3,6:9:21:218,21,0
chr10	27476461	.	C	CT	10157.08	PASS	AB=1.000;AC=51;AF=0.911;AN=56;BaseQRankSum=-5.301;DP=459;FS=0.000;HRun=9;HaplotypeScore=42.3898;InbreedingCoeff=0.7829;MQ=64.63;MQ0=8;MQRankSum=-1.196;QD=23.08;ReadPosRankSum=0.316;VQSLOD=5.1623;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,28:33:55.36:793,55,0	1/1:1,10:11:28.28:288,28,0	0/0:4,0:4:9:0,9,78	0/1:5,0:5:0.35:0,0,44	1/1:3,20:23:48.07:508,48,0	1/1:4,14:18:42.07:451,42,0	1/1:5,6:11:15.01:153,15,0	1/1:11,24:34:72.19:794,72,0	1/1:3,13:16:39.11:430,39,0	1/1:3,17:20:57.11:615,57,0	1/1:4,17:22:44.91:465,45,0	1/1:0,10:10:18.02:187,18,0	1/1:7,12:19:45.09:480,45,0	1/1:4,9:13:24.06:265,24,0	0/0:14,0:15:44.03:0,44,371	1/1:2,11:13:30.08:331,30,0	1/1:2,22:24:63.17:695,63,0	1/1:4,11:12:7.05:305,7,0	1/1:4,12:16:33.09:362,33,0	1/1:2,30:30:69.08:747,69,0	1/1:3,11:13:27.07:299,27,0	1/1:6,1:7:6.02:66,6,0	1/1:1,12:13:33.09:364,33,0	1/1:2,6:8:15.04:166,15,0	1/1:7,15:22:50.96:537,51,0	1/1:2,11:12:33.09:364,33,0	1/1:2,11:14:35.89:366,36,0	1/1:3,6:9:12.03:128,12,0
chr10	27476654	.	CATTA	C	14371.28	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=3.481;DP=370;FS=9.571;HRun=0;HaplotypeScore=67.3160;InbreedingCoeff=0.9116;MQ=73.06;MQ0=0;MQRankSum=-4.415;QD=42.77;ReadPosRankSum=4.394;VQSLOD=4.5027;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,8:8:18.06:323,18,0	1/1:0,8:8:18.06:324,18,0	0/0:12,0:12:21.53:0,22,422	0/0:6,0:6:17.42:0,17,392	1/1:3,16:19:45.15:799,45,0	1/1:1,15:16:36.12:646,36,0	1/1:1,11:12:24.08:431,24,0	1/1:5,10:15:30.10:530,30,0	1/1:2,16:18:42.14:755,42,0	1/1:1,13:14:39.13:701,39,0	1/1:0,18:18:45.15:804,45,0	1/1:0,11:11:30.10:539,30,0	1/1:1,14:15:36.12:647,36,0	1/1:0,13:13:18.06:323,18,0	0/0:16,0:16:45.15:0,45,1095	1/1:4,23:27:63.22:1132,63,0	1/1:1,12:13:27.09:485,27,0	1/1:1,7:8:9.03:162,9,0	1/1:0,5:5:15.05:270,15,0	1/1:1,18:19:54.18:956,54,0	1/1:2,5:7:12.04:216,12,0	1/1:0,3:3:9.03:143,9,0	1/1:1,10:11:30.10:538,30,0	1/1:0,4:4:9.03:162,9,0	1/1:1,23:24:54.19:967,54,0	1/1:0,17:17:51.17:904,51,0	1/1:0,22:22:63.22:1132,63,0	1/1:0,9:9:27.09:485,27,0
chr10	27476906	.	C	CTT	11966.55	PASS	AB=1.000;AC=53;AF=0.946;AN=56;BaseQRankSum=-5.316;DP=464;FS=12.201;HRun=10;HaplotypeScore=54.1012;InbreedingCoeff=0.5915;MQ=74.94;MQ0=0;MQRankSum=-5.565;QD=26.59;ReadPosRankSum=3.459;VQSLOD=3.1928;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,14:17:38.62:546,39,0	1/1:1,7:9:20.51:246,21,0	0/1:12,0:11:10.73:11,0,74	0/0:13,0:11:17.16:0,17,185	1/1:6,13:23:50.09:624,50,0	1/1:2,18:20:43.03:628,43,0	1/1:4,6:12:23.55:286,24,0	1/1:14,19:35:62.48:743,62,0	1/1:2,9:11:21.07:313,21,0	1/1:4,16:20:45.05:583,45,0	1/1:4,14:19:47.41:560,47,0	1/1:6,16:25:46.48:579,46,0	1/1:2,12:15:27.08:387,27,0	1/1:0,13:14:36.07:496,36,0	1/1:1,13:17:35.60:485,36,0	1/1:0,11:12:24.07:342,24,0	1/1:5,15:21:44.64:635,45,0	1/1:6,11:19:27.09:402,27,0	1/1:2,12:16:41.09:530,41,0	1/1:2,15:19:47.06:594,47,0	1/1:4,4:8:12.04:179,12,0	1/1:1,6:7:15.05:224,15,0	1/1:3,17:21:45.15:654,45,0	1/1:3,4:7:12.51:180,13,0	1/1:3,7:12:23.57:322,24,0	1/1:7,14:22:48.14:666,48,0	1/1:9,19:30:50.28:665,50,0	1/1:0,5:6:6.02:89,6,0
chr10	27480318	.	A	AAC	28352.87	PASS	AC=50;AF=0.926;AN=54;BaseQRankSum=-3.906;DP=688;FS=1.277;HRun=0;HaplotypeScore=122.7522;InbreedingCoeff=0.9832;MQ=81.18;MQ0=0;MQRankSum=-10.123;QD=44.16;ReadPosRankSum=5.393;VQSLOD=6.0078;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,44:49:99:1946,111,0	1/1:1,8:9:24.08:429,24,0	0/0:23,0:23:63.19:0,63,872	0/0:22,0:22:55.12:0,55,783	1/1:1,28:29:72.24:1267,72,0	1/1:2,32:35:99:1742,99,0	1/1:2,15:18:36.12:647,36,0	1/1:8,23:31:75.23:1274,75,0	1/1:2,21:24:57.20:1022,57,0	1/1:5,42:47:99:2257,129,0	1/1:3,21:24:48.16:821,48,0	1/1:1,23:24:60.07:1074,60,0	1/1:4,20:24:63.22:1117,63,0	1/1:2,29:31:81.28:1450,81,0	1/1:2,24:26:66.23:1183,66,0	1/1:2,17:19:48.16:862,48,0	1/1:2,13:15:36.12:642,36,0	./.	1/1:2,19:21:57.11:955,57,0	1/1:5,26:33:78.27:1372,78,0	1/1:0,18:18:48.16:854,48,0	1/1:2,24:26:69.23:1190,69,0	1/1:2,19:21:57.19:1008,57,0	1/1:0,23:23:65.93:1184,66,0	1/1:3,29:32:81.28:1443,81,0	1/1:3,25:29:78.25:1369,78,0	1/1:2,24:26:56.94:1027,57,0	1/1:2,6:8:12.04:215,12,0
chr10	27482079	.	GT	G	304.40	PASS	AB=1.000;AC=3;AF=0.056;AN=54;BaseQRankSum=5.801;DP=551;FS=2.628;HRun=10;HaplotypeScore=56.4193;InbreedingCoeff=0.5472;MQ=73.36;MQ0=0;MQRankSum=-0.042;QD=8.01;ReadPosRankSum=0.139;VQSLOD=1.6867;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:41.50:0,42,484	0/0:10,0:10:30.08:0,30,332	0/0:12,3:14:0.99:0,1,222	0/1:17,0:16:18.24:18,0,207	0/0:35,1:36:70.18:0,70,984	0/0:21,1:22:31.10:0,31,571	0/0:28,0:28:75.18:0,75,818	0/0:29,0:30:69.19:0,69,763	0/0:12,0:12:30.08:0,30,332	0/0:23,1:25:45.95:0,46,705	0/0:27,0:27:78.21:0,78,863	0/0:24,0:25:65.98:0,66,694	0/0:19,0:19:54.15:0,54,597	0/0:16,0:16:39.10:0,39,429	1/1:3,18:21:44.99:391,45,0	0/0:15,0:15:45.10:0,45,484	0/0:24,0:24:66.18:0,66,730	0/0:14,1:15:15.98:0,16,389	0/0:24,0:24:54.15:0,54,597	0/0:24,0:24:52.47:0,52,604	0/0:9,0:9:21.06:0,21,232	0/0:18,0:18:47.75:0,48,504	0/0:22,0:22:63.17:0,63,697	0/0:15,0:15:36.10:0,36,398	0/0:19,0:19:54.15:0,54,597	0/0:18,1:19:22.07:0,22,472	0/0:28,0:27:81.18:0,81,868	./.
chr10	27483612	.	A	ATTTT	8372.20	PASS	AB=1.000;AC=53;AF=0.946;AN=56;BaseQRankSum=-2.185;DP=439;FS=0.000;HRun=16;HaplotypeScore=100.3353;InbreedingCoeff=0.2597;MQ=68.96;MQ0=1;MQRankSum=-2.421;QD=20.08;ReadPosRankSum=-2.038;VQSLOD=2.9098;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:23,1:24:38.79:556,39,0	1/1:3,2:6:9.03:160,9,0	0/0:21,0:13:2.20:0,2,34	0/1:11,0:11:22.66:23,0,31	1/1:16,1:19:20.52:297,21,0	1/1:8,2:10:24.07:378,24,0	1/1:9,0:9:8.97:106,9,0	1/1:26,0:34:49.91:601,50,0	1/1:13,1:14:26.96:376,27,0	1/1:19,0:21:21.02:244,21,0	1/1:19,0:19:22.78:271,23,0	1/1:11,0:11:22.07:254,22,0	1/1:6,0:6:5.98:48,6,0	1/1:15,0:15:27.03:382,27,0	1/1:2,0:10:2.65:21,3,0	1/1:20,2:23:51.13:808,51,0	1/1:15,1:17:28.27:387,28,0	1/1:15,0:16:23.09:316,23,0	1/1:15,4:22:32.19:399,32,0	1/1:13,1:15:32.63:445,33,0	1/1:6,1:10:4.84:40,5,0	1/1:15,1:16:25.62:396,26,0	1/1:13,1:17:26.56:461,27,0	1/1:6,1:8:15.51:234,16,0	1/1:18,0:18:26.18:322,26,0	1/1:15,0:15:28.84:316,29,0	1/1:18,2:21:33.08:513,33,0	1/1:5,0:5:2.96:20,3,0
chr10	27483686	.	CT	C	9520.50	PASS	AB=1.000;AC=51;AF=0.911;AN=56;BaseQRankSum=2.462;DP=480;FS=5.771;HRun=11;HaplotypeScore=89.0732;InbreedingCoeff=0.8747;MQ=66.29;MQ0=0;MQRankSum=-3.175;QD=20.92;ReadPosRankSum=4.795;VQSLOD=5.2202;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,17:21:47.88:394,48,0	1/1:3,4:7:11.95:98,12,0	0/0:10,0:10:18.04:0,18,186	0/1:5,0:6:0.21:0,0,81	1/1:1,20:21:59.90:492,60,0	1/1:3,16:19:44.91:369,45,0	1/1:0,12:12:26.97:222,27,0	1/1:9,19:28:56.58:458,57,0	1/1:2,19:21:53.91:442,54,0	1/1:1,25:27:76.88:616,77,0	1/1:1,22:23:68.76:556,69,0	1/1:4,11:15:38.92:320,39,0	1/1:0,11:11:32.96:271,33,0	1/1:1,15:16:35.96:295,36,0	0/0:15,0:15:39.05:0,39,387	1/1:1,20:21:56.93:467,57,0	1/1:3,11:14:29.95:246,30,0	1/1:1,9:9:23.97:197,24,0	1/1:3,15:18:44.91:369,45,0	1/1:2,25:27:71.90:591,72,0	1/1:0,14:13:38.92:314,39,0	1/1:0,17:17:50.94:418,51,0	1/1:1,17:18:50.93:417,51,0	1/1:0,10:10:26.96:221,27,0	1/1:0,19:19:50.93:418,51,0	1/1:3,23:26:68.82:565,69,0	1/1:0,27:27:77.91:640,78,0	1/1:1,5:6:14.98:123,15,0
chr10	27484311	.	TTA	T	19748.53	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-4.674;DP=542;FS=6.273;HRun=0;HaplotypeScore=69.5605;InbreedingCoeff=0.9873;MQ=81.23;MQ0=0;MQRankSum=-5.805;QD=40.06;ReadPosRankSum=3.690;VQSLOD=6.9693;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,11:11:24.08:366,24,0	1/1:0,6:6:18.06:275,18,0	0/0:14,0:14:39.08:0,39,672	0/0:14,0:14:38.99:0,39,626	1/1:0,24:24:72.04:1015,72,0	1/1:0,20:20:51.17:779,51,0	1/1:0,10:10:27.09:413,27,0	1/1:0,35:35:99:1403,99,0	1/1:0,27:27:69.23:1055,69,0	1/1:0,23:23:66.20:985,66,0	1/1:0,17:17:51.17:780,51,0	1/1:1,17:18:48.16:722,48,0	1/1:0,22:22:63.21:963,63,0	1/1:0,21:21:54.18:825,54,0	0/0:21,0:21:15.06:0,15,31	1/1:0,13:13:39.13:596,39,0	1/1:0,9:9:21.02:293,21,0	1/1:0,23:23:60.20:915,60,0	1/1:0,16:16:48.08:662,48,0	1/1:0,27:27:78.09:1111,78,0	1/1:0,8:8:21.07:320,21,0	1/1:0,20:20:51.04:700,51,0	1/1:0,26:26:71.83:1073,72,0	1/1:0,20:20:39.13:596,39,0	1/1:0,29:29:81.28:1238,81,0	1/1:0,21:21:63.21:963,63,0	1/1:1,32:33:69.70:1197,70,0	1/1:0,14:14:33.11:503,33,0
chr10	27484312	.	TA	T	7223.55	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=4.353;DP=544;FS=3.864;HRun=4;HaplotypeScore=103.8163;InbreedingCoeff=0.9851;MQ=81.82;MQ0=0;MQRankSum=-8.420;QD=14.03;ReadPosRankSum=5.210;VQSLOD=3.5375;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:11:23:122,23,0	1/1:6,0:6:17.25:92,17,0	0/0:15,0:15:36.10:0,36,460	0/0:14,0:14:38.92:0,39,442	1/1:24,0:24:63.27:337,63,0	1/1:20,0:20:48.88:259,49,0	1/1:10,0:10:25.88:137,26,0	1/1:35,0:35:86.65:486,87,0	1/1:27,0:27:66.13:351,66,0	1/1:23,0:23:63.36:342,63,0	1/1:17,0:17:48.88:259,49,0	1/1:18,0:18:44.68:233,45,0	1/1:22,0:22:60.38:320,60,0	1/1:21,0:21:51.75:274,52,0	1/1:0,21:21:51.16:610,51,0	1/1:13,0:13:37.38:198,37,0	1/1:9,0:9:17.25:91,17,0	1/1:23,0:23:57.50:303,58,0	1/1:16,0:16:37.44:201,37,0	1/1:27,0:27:72.04:390,72,0	1/1:8,0:8:20.13:106,20,0	1/1:20,0:20:43.22:233,43,0	1/1:26,0:26:68.82:369,69,0	1/1:20,0:20:37.38:198,37,0	1/1:29,0:29:77.63:412,78,0	1/1:21,0:21:60.38:321,60,0	1/1:33,0:33:77.72:416,78,0	1/1:15,0:15:31.63:167,32,0
chr10	27484595	.	A	ATC	25081.77	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-3.161;DP=548;FS=26.155;HRun=0;HaplotypeScore=110.0685;InbreedingCoeff=0.9688;MQ=75.62;MQ0=0;MQRankSum=-8.289;QD=48.89;ReadPosRankSum=5.304;VQSLOD=3.5243;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,19:19:45.15:839,45,0	1/1:0,10:10:27.09:503,27,0	0/0:19,0:19:50.71:0,51,728	0/0:16,0:16:40.71:0,41,495	1/1:0,27:28:78.26:1432,78,0	1/1:1,28:29:84.29:1543,84,0	1/1:1,9:11:30.10:509,30,0	1/1:1,28:30:87.26:1514,87,0	1/1:0,10:10:30.10:555,30,0	1/1:2,25:28:81.25:1439,81,0	1/1:3,10:14:36.12:618,36,0	1/1:1,18:19:51.17:931,51,0	1/1:1,24:27:63.22:1174,63,0	1/1:1,11:12:33.04:577,33,0	1/1:3,30:33:81.28:1489,81,0	1/1:1,21:22:63.22:1170,63,0	1/1:1,18:19:45.15:838,45,0	1/1:0,13:13:36.12:667,36,0	1/1:1,16:18:54.17:935,54,0	1/1:0,29:30:75.24:1360,75,0	1/1:0,11:11:30.10:559,30,0	1/1:0,24:24:69.24:1286,69,0	1/1:2,18:20:48.16:888,48,0	1/1:0,11:11:27.09:503,27,0	1/1:1,28:30:87.30:1596,87,0	1/1:0,19:19:54.18:983,54,0	1/1:0,21:22:54.19:1006,54,0	1/1:0,3:3:9.03:168,9,0
chr10	27485365	.	AAT	A	222.97	PASS	AB=0.600;AC=15;AF=0.938;AN=16;DP=135;FS=0.000;HRun=0;HaplotypeScore=9.8882;MQ=14.18;MQ0=106;QD=5.72;VQSLOD=1.6791;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	1/1:0,2:1:3.01:33,3,0	./.	./.	./.	./.	1/1:0,1:1:3.01:32,3,0	./.	./.	./.	./.	./.	./.	./.	./.	./.	1/1:0,7:1:3.01:38,3,0	1/1:2,5:1:3.01:38,3,0	./.	./.	./.	./.	0/1:1,2:2:0:0,0,0	./.	./.	1/1:1,5:1:3.01:38,3,0	1/1:2,4:3:6.02:76,6,0	1/1:1,6:1:3.01:38,3,0
chr10	27487038	.	CAAA	C	14436.75	PASS	AB=0.571;AC=51;AF=0.911;AN=56;BaseQRankSum=-5.683;DP=515;FS=1.012;HRun=12;HaplotypeScore=83.3791;InbreedingCoeff=0.7559;MQ=67.79;MQ0=0;MQRankSum=-1.967;QD=29.28;ReadPosRankSum=3.717;VQSLOD=4.4283;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,18:22:19.82:610,20,0	1/1:3,16:19:48.12:598,48,0	0/0:7,0:6:12.04:0,12,159	0/0:15,0:12:23.23:0,23,286	1/1:5,29:35:79.79:1020,80,0	1/1:1,20:21:48.14:607,48,0	1/1:0,15:15:42.13:526,42,0	1/1:7,26:33:78.16:929,78,0	1/1:0,15:15:39.12:489,39,0	1/1:0,21:21:63.19:784,63,0	1/1:4,13:17:36.07:455,36,0	1/1:1,16:17:39.12:492,39,0	1/1:7,13:20:30.03:375,30,0	0/1:3,9:12:29.22:269,0,29	1/1:0,17:17:42.13:526,42,0	1/1:2,12:14:36.10:455,36,0	1/1:0,13:13:36.12:455,36,0	1/1:0,7:7:15.05:190,15,0	1/1:2,22:24:66.19:818,66,0	1/1:3,23:26:51.02:644,51,0	1/1:2,18:20:48.14:607,48,0	1/1:1,14:15:30.02:379,30,0	1/1:2,14:16:38.99:492,39,0	1/1:2,15:19:41.80:490,42,0	1/1:1,20:21:51.16:636,51,0	1/1:3,13:16:39.08:475,39,0	1/1:3,21:24:60.18:758,60,0	1/1:1,12:14:30.02:359,30,0
chr10	27487733	.	A	ACTT	37868.42	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-1.345;DP=757;FS=3.571;HRun=0;HaplotypeScore=127.5598;InbreedingCoeff=0.9989;MQ=83.40;MQ0=0;MQRankSum=-11.165;QD=53.64;ReadPosRankSum=6.109;VQSLOD=7.0393;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,30:34:90.26:1831,90,0	1/1:0,10:10:30.10:679,30,0	0/0:25,0:25:63.21:0,63,997	0/0:26,0:26:72.20:0,72,1086	1/1:2,25:27:66.22:1420,66,0	1/1:3,26:30:72.25:1600,72,0	1/1:7,21:28:57.20:1280,57,0	1/1:5,37:45:99:2618,129,0	1/1:2,26:29:66.23:1460,66,0	1/1:2,34:37:99:2353,108,0	1/1:2,20:22:60.20:1229,60,0	1/1:2,34:36:81.27:1728,81,0	1/1:6,30:38:99:2192,99,0	1/1:1,23:24:69.24:1532,69,0	1/1:5,44:49:99:2441,114,0	1/1:1,26:28:72.20:1553,72,0	1/1:1,19:20:45.15:1020,45,0	1/1:1,15:16:33.11:748,33,0	1/1:6,19:26:72.20:1428,72,0	1/1:4,23:28:63.21:1333,63,0	1/1:1,25:26:51.17:1124,51,0	1/1:2,21:25:57.15:1133,57,0	1/1:1,24:25:66.22:1430,66,0	1/1:1,15:18:33.11:748,33,0	1/1:3,11:16:45.07:902,45,0	1/1:1,28:29:84.26:1810,84,0	1/1:4,24:30:78.23:1667,78,0	1/1:0,9:10:26.91:612,27,0
chr10	27488369	.	C	CCACACACACACACACACACACA	21148.32	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=3.727;DP=573;FS=2.152;HRun=0;HaplotypeScore=354.7766;InbreedingCoeff=0.6973;MQ=57.12;MQ0=2;MQRankSum=-7.270;QD=40.28;ReadPosRankSum=2.682;VQSLOD=2.9015;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:16:14.94:545,15,0	1/1:8,0:8:11.96:540,12,0	0/0:29,0:27:68.13:0,68,1764	0/0:19,0:18:31.04:0,31,1118	1/1:20,0:19:11.73:92,12,0	1/1:26,0:26:30.89:814,31,0	1/1:16,0:16:20.97:1179,21,0	1/1:31,0:26:62.62:1503,63,0	1/1:8,10:23:11.26:934,11,0	1/1:10,0:19:50.83:1808,51,0	1/1:26,0:26:20.90:209,21,0	1/1:18,0:18:17.90:570,18,0	1/1:29,0:29:35.80:1111,36,0	1/1:19,0:18:14.94:343,15,0	1/1:18,0:17:11.99:122,12,0	1/1:30,0:30:41.85:2543,42,0	1/1:17,0:16:18.01:1016,18,0	1/1:8,2:7:14.97:854,15,0	1/1:18,0:18:39.33:1027,39,0	1/1:24,0:24:9.02:302,9,0	1/1:13,0:12:3:25,3,0	1/1:18,0:18:11.99:141,12,0	1/1:21,0:21:9:98,9,0	1/1:20,0:20:8.36:584,8,0	1/1:19,0:19:3.01:41,3,0	1/1:31,0:30:59.40:1889,59,0	1/1:25,0:25:50.71:2752,51,0	1/1:6,0:6:14.87:105,15,0
chr10	27488648	.	C	CG	10625.82	PASS	AC=54;AF=0.964;AN=56;BaseQRankSum=-4.404;DP=443;FS=3.605;HRun=0;HaplotypeScore=55.3574;InbreedingCoeff=0.5225;MQ=47.78;MQ0=21;MQRankSum=-0.778;QD=24.77;ReadPosRankSum=-0.657;VQSLOD=5.0910;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:24,10:33:75.18:1099,75,0	1/1:2,2:4:9.03:139,9,0	1/1:17,1:8:0.80:59,1,0	0/0:13,0:6:10.27:0,10,61	1/1:14,2:15:6.80:139,7,0	1/1:15,4:19:41.97:617,42,0	1/1:1,16:16:42.14:624,42,0	1/1:12,18:29:74.05:873,74,0	1/1:10,3:12:26.97:313,27,0	1/1:6,3:6:17.93:203,18,0	1/1:16,8:24:53.64:624,54,0	1/1:8,1:8:15.02:190,15,0	1/1:15,7:21:42.05:516,42,0	1/1:9,8:17:42.11:597,42,0	1/1:8,18:26:54.13:742,54,0	1/1:7,9:14:30.09:439,30,0	1/1:19,8:25:56.86:733,57,0	1/1:8,1:8:14.83:130,15,0	1/1:6,3:7:20.91:271,21,0	1/1:12,6:16:29.03:443,29,0	1/1:9,3:12:29.65:305,30,0	1/1:6,1:5:8.93:86,9,0	1/1:11,1:12:11.70:92,12,0	1/1:9,5:13:33.07:488,33,0	1/1:12,4:16:24.04:305,24,0	1/1:12,4:14:30.01:389,30,0	1/1:10,0:9:11.99:160,12,0	1/1:1,2:2:3.01:46,3,0
chr10	27488661	.	CA	C	5956.59	PASS	AB=0.812;AC=48;AF=0.889;AN=54;BaseQRankSum=-2.576;DP=444;FS=2.565;HRun=10;HaplotypeScore=71.8444;InbreedingCoeff=0.3112;MQ=46.94;MQ0=29;MQRankSum=-0.361;QD=13.98;ReadPosRankSum=0.683;VQSLOD=5.1203;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:25,11:35:77.98:675,78,0	1/1:2,3:5:11.99:104,12,0	0/1:23,1:8:10.20:10,0,81	0/0:17,0:6:11.72:0,12,91	1/1:12,6:18:23.98:208,24,0	1/1:14,7:21:47.99:416,48,0	1/1:1,13:14:38.99:338,39,0	0/1:9,13:20:3.17:204,0,3	1/1:7,5:11:20.92:175,21,0	1/1:3,7:8:17.98:156,18,0	1/1:11,5:16:23.99:207,24,0	1/1:6,7:12:29.49:244,29,0	1/1:7,10:16:35.73:298,36,0	0/1:13,4:17:3.20:204,0,3	1/1:9,0:27:13:50,13,0	1/1:9,9:16:35.95:305,36,0	1/1:15,13:27:38.45:337,38,0	1/1:4,2:5:9:78,9,0	1/1:5,5:7:17.99:156,18,0	1/1:7,11:16:38.98:338,39,0	1/1:6,5:10:23.99:208,24,0	1/1:3,3:5:6:52,6,0	1/1:8,3:11:15:129,15,0	0/1:14,3:16:0.15:226,0,0	1/1:8,7:16:26.03:214,26,0	1/1:8,9:15:38.99:338,39,0	1/1:10,6:15:32.99:286,33,0	./.
chr10	27489998	.	C	CCTT	24949.14	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=1.849;DP=583;FS=2.246;HRun=0;HaplotypeScore=97.1040;InbreedingCoeff=0.9874;MQ=45.72;MQ0=34;MQRankSum=1.584;QD=45.28;ReadPosRankSum=4.376;VQSLOD=6.5939;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,28:26:57.19:1195,57,0	1/1:1,6:8:18.02:344,18,0	0/0:16,0:9:25.83:0,26,344	0/0:14,0:8:18.06:0,18,275	1/1:4,30:33:84.25:1766,84,0	1/1:2,19:20:51.18:1093,51,0	1/1:3,18:22:51.18:1090,51,0	1/1:9,17:23:42.12:791,42,0	1/1:2,15:15:26.99:574,27,0	1/1:0,15:14:42.02:770,42,0	1/1:4,15:20:45.07:881,45,0	1/1:2,19:21:45.15:954,45,0	1/1:5,15:22:42.14:907,42,0	1/1:3,16:16:36.12:769,36,0	1/1:6,26:31:72.25:1527,72,0	1/1:0,18:15:42.14:907,42,0	1/1:3,15:16:39.13:842,39,0	1/1:1,16:17:45.13:972,45,0	1/1:2,14:14:39.13:793,39,0	1/1:5,21:25:63.22:1358,63,0	1/1:4,12:13:30.10:648,30,0	1/1:5,18:23:57.11:1139,57,0	1/1:1,20:21:57.20:1219,57,0	1/1:6,21:24:54.19:1166,54,0	1/1:1,19:21:54.19:1165,54,0	1/1:2,9:9:27.09:558,27,0	1/1:6,19:23:51.17:1066,51,0	1/1:0,8:8:21.07:454,21,0
chr10	27492756	.	AC	A	504.69	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.109;DP=692;FS=0.928;HRun=1;HaplotypeScore=86.5011;InbreedingCoeff=0.9916;MQ=79.14;MQ0=0;MQRankSum=-2.828;QD=25.23;ReadPosRankSum=1.351;VQSLOD=3.6329;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:34:99:0,105,1646	0/0:14,0:14:39.13:0,39,624	0/0:19,0:19:54.02:0,54,745	0/0:16,0:16:48.04:0,48,709	0/0:34,0:34:99:0,102,1625	0/0:30,0:30:90.31:0,90,1430	0/0:12,0:12:36.12:0,36,571	0/0:38,0:38:99:0,114,1776	0/0:34,0:34:99:0,102,1604	0/0:31,0:31:93.32:0,93,1487	0/0:24,0:24:72.25:0,72,1149	0/0:29,0:29:87.27:0,87,1339	0/0:37,0:37:99:0,111,1740	0/0:33,0:33:99:0,99,1531	1/1:3,17:20:51.59:600,52,0	0/0:25,0:25:75.26:0,75,1197	0/0:22,0:22:63.21:0,63,1004	0/0:11,0:11:33.11:0,33,527	0/0:18,0:18:51.17:0,51,814	0/0:28,0:28:84.29:0,84,1330	0/0:24,0:24:72.25:0,72,1151	0/0:23,0:23:66.22:0,66,1050	0/0:36,0:36:99:0,108,1701	0/0:19,0:19:57.19:0,57,904	0/0:13,0:13:39.13:0,39,624	0/0:38,0:38:99:0,114,1797	0/0:23,0:21:69.24:0,69,1103	0/0:6,0:6:18.06:0,18,285
chr10	27493129	.	A	AT	504.94	PASS	AB=0.929;AC=3;AF=0.054;AN=56;BaseQRankSum=-5.766;DP=517;FS=0.000;HRun=9;HaplotypeScore=48.9469;InbreedingCoeff=0.6086;MQ=73.12;MQ0=0;MQRankSum=-1.359;QD=14.03;ReadPosRankSum=-1.207;VQSLOD=2.8673;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:44.97:0,45,391	0/1:12,1:13:0.20:0,0,227	0/0:8,0:8:11.97:0,12,100	0/0:8,1:9:2.99:0,3,156	0/0:43,0:43:99:0,117,1012	0/0:24,0:24:62.97:0,63,547	0/0:10,0:10:26.99:0,27,234	0/0:23,0:23:8.82:0,9,305	0/0:18,0:18:44.97:0,45,391	0/0:22,0:22:53.98:0,54,469	0/0:26,0:26:71.97:0,72,625	0/0:18,0:18:47.96:0,48,412	0/0:14,0:14:29.98:0,30,260	0/0:20,0:20:44.97:0,45,391	1/1:4,18:23:56.95:599,57,0	0/0:23,0:23:68.99:0,69,599	0/0:26,0:26:69.85:0,70,596	0/0:4,0:4:9:0,9,78	0/0:13,0:13:32.99:0,33,287	0/0:31,0:31:83.97:0,84,729	0/0:13,0:13:35.97:0,36,308	0/0:11,0:11:32.99:0,33,287	0/0:18,0:18:53.99:0,54,469	0/0:10,0:10:26.99:0,27,234	0/0:30,0:30:80.98:0,81,703	0/0:24,0:24:68.98:0,69,599	0/0:18,0:18:47.97:0,48,413	0/0:6,0:6:15:0,15,130
chr10	27493808	.	ATG	A	1520.96	PASS	AB=0.778;AC=42;AF=0.840;AN=50;BaseQRankSum=0.919;DP=169;FS=8.840;HRun=0;HaplotypeScore=36.4449;InbreedingCoeff=0.3541;MQ=85.92;MQ0=3;MQRankSum=-1.407;QD=11.98;ReadPosRankSum=3.668;VQSLOD=1.9023;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,0:7:5.90:47,6,0	1/1:3,0:3:5.99:48,6,0	0/0:12,0:10:11.17:0,11,126	0/0:15,0:6:8.94:0,9,66	./.	1/1:2,0:2:2.99:24,3,0	1/1:7,0:7:14.91:116,15,0	0/1:5,20:25:18.43:352,0,18	1/1:5,0:5:14.98:124,15,0	1/1:0,4:4:11.86:82,12,0	./.	./.	1/1:7,0:7:14.85:109,15,0	1/1:4,0:4:3:25,3,0	0/0:4,0:4:8.98:0,9,73	1/1:3,0:3:8.88:61,9,0	1/1:12,0:11:4.96:44,5,0	1/1:3,0:3:5.97:45,6,0	0/1:6,0:6:7.26:36,0,7	1/1:4,0:4:8.99:75,9,0	1/1:4,0:4:2.99:24,3,0	1/1:2,0:2:5.99:50,6,0	1/1:3,0:3:5.99:50,6,0	1/1:2,0:2:5.99:48,6,0	1/1:6,0:6:8.99:75,9,0	1/1:8,0:8:21.21:142,21,0	1/1:9,0:8:8.90:62,9,0	1/1:1,0:1:2.99:23,3,0
chr10	27493814	.	A	ATG	930.28	PASS	AB=1.000;AC=39;AF=0.780;AN=50;BaseQRankSum=-0.082;DP=143;FS=17.087;HRun=0;HaplotypeScore=35.4680;InbreedingCoeff=0.2101;MQ=63.94;MQ0=3;MQRankSum=2.208;QD=8.31;ReadPosRankSum=1.955;VQSLOD=1.3578;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,0:5:2.93:24,3,0	1/1:3,0:3:5.99:48,6,0	0/0:4,0:2:6:0,6,54	0/0:14,0:5:2.97:0,3,20	./.	1/1:2,0:2:2.99:24,3,0	1/1:4,0:4:5.92:41,6,0	0/1:25,0:25:75.10:216,0,75	1/1:4,0:4:11.85:87,12,0	1/1:4,0:4:11.78:76,12,0	./.	./.	1/1:5,0:5:8.85:59,9,0	1/1:4,0:4:2.99:24,3,0	0/0:1,0:1:3:0,3,25	1/1:2,0:2:5.85:34,6,0	1/1:1,7:7:0.47:1,0,0	1/1:4,0:4:5.72:36,6,0	0/1:6,0:6:16.26:40,0,16	1/1:3,0:3:5.99:48,6,0	1/1:4,0:4:2.99:24,3,0	1/1:1,0:1:2.99:24,3,0	1/1:2,0:2:2.99:24,3,0	1/1:1,0:1:2.99:23,3,0	1/1:7,0:7:8.98:73,9,0	0/1:9,0:9:3.40:76,0,3	1/1:9,0:8:8.67:61,9,0	0/0:1,0:1:2.92:0,3,17
chr10	27493875	.	G	GAA	1752.17	PASS	AB=0.955;AC=43;AF=0.796;AN=54;BaseQRankSum=5.502;DP=184;FS=4.258;HRun=1;HaplotypeScore=48.9286;InbreedingCoeff=0.1295;MQ=68.04;MQ0=4;MQRankSum=1.381;QD=10.75;ReadPosRankSum=-2.495;VQSLOD=-0.3000;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:5,0:5:12.99:61,0,13	1/1:1,0:1:3:28,3,0	0/0:10,0:5:12.89:0,13,112	0/1:9,0:6:1.71:2,0,39	1/1:8,0:8:11.90:87,12,0	1/1:7,0:7:14.87:107,15,0	1/1:5,0:4:12.01:109,12,0	0/1:27,0:26:99:267,0,145	1/1:3,0:3:6:54,6,0	0/1:6,5:10:47.42:86,0,47	1/1:7,0:7:9.01:82,9,0	1/1:5,0:5:8.94:68,9,0	1/1:6,0:6:11.94:94,12,0	1/1:4,0:4:11.98:101,12,0	0/0:10,0:10:17.98:0,18,150	./.	1/1:6,0:4:8.59:80,9,0	1/1:0,4:4:3.01:39,3,0	0/1:5,0:5:21.07:57,0,21	1/1:6,0:5:5.97:46,6,0	1/1:6,0:5:11.98:101,12,0	1/1:7,0:7:2.96:20,3,0	1/1:2,0:2:2.97:20,3,0	1/1:4,0:4:6:54,6,0	1/1:5,0:5:11.94:96,12,0	0/1:5,0:5:5.04:75,0,5	1/1:10,0:8:11.19:115,11,0	0/1:5,0:4:4.04:55,0,4
chr10	27494911	.	G	GA	461.40	PASS	AB=0.950;AC=3;AF=0.054;AN=56;BaseQRankSum=-3.924;DP=568;FS=2.462;HRun=10;HaplotypeScore=83.8239;InbreedingCoeff=0.5891;MQ=73.72;MQ0=5;MQRankSum=1.774;QD=10.03;ReadPosRankSum=-0.428;VQSLOD=2.8382;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:44.93:0,45,369	0/0:11,0:12:25.99:0,26,203	0/0:29,0:19:3.85:0,4,104	0/1:15,1:12:5.31:5,0,13	0/0:31,0:31:66.53:0,67,583	0/0:24,2:27:32.86:0,33,458	0/0:10,0:11:32:0,32,252	0/0:26,0:26:59.14:0,59,464	0/0:17,0:17:47.94:0,48,394	0/0:22,0:22:47.89:0,48,391	0/0:28,0:28:80.64:0,81,649	0/0:17,0:17:38.91:0,39,317	0/0:17,0:17:31.89:0,32,289	0/0:14,0:15:39.80:0,40,305	1/1:2,22:27:56.68:555,57,0	0/0:24,0:24:53.92:0,54,443	0/0:17,0:17:50.92:0,51,416	0/0:16,1:17:6.91:0,7,262	0/0:15,0:14:38.90:0,39,316	0/0:41,0:41:99:0,102,827	0/0:11,0:11:20.56:0,21,157	0/0:18,0:18:44.93:0,45,369	0/0:23,2:25:10.95:0,11,502	0/0:10,0:10:21.04:0,21,213	0/0:24,0:24:62.89:0,63,516	0/0:21,0:21:56.61:0,57,454	0/0:20,0:20:53.93:0,54,443	0/0:10,0:10:29.96:0,30,245
chr10	27495767	.	T	TGATA	31385.84	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-7.028;DP=633;FS=0.000;HRun=0;HaplotypeScore=101.8981;InbreedingCoeff=0.8450;MQ=72.83;MQ0=1;MQRankSum=-6.275;QD=55.45;ReadPosRankSum=3.776;VQSLOD=5.9114;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:17,13:30:74.84:1539,75,0	1/1:0,13:14:21.03:564,21,0	0/0:24,0:24:59.58:0,60,804	0/0:14,0:12:2.19:0,2,339	1/1:1,32:36:78.10:2001,78,0	1/1:17,17:34:87.13:1991,87,0	1/1:0,16:16:15.05:404,15,0	1/1:5,20:25:66.17:1356,66,0	1/1:2,30:33:63.22:1673,63,0	1/1:0,31:32:96.26:2184,96,0	1/1:9,15:24:63.17:1575,63,0	1/1:1,12:13:24.08:643,24,0	1/1:2,18:24:45.12:1207,45,0	1/1:1,12:13:39.12:996,39,0	0/0:29,0:29:81.20:0,81,1454	1/1:0,16:18:33.11:864,33,0	1/1:9,10:19:48.12:1041,48,0	1/1:7,6:13:11.45:542,11,0	1/1:1,9:10:27.09:682,27,0	1/1:11,35:46:99:3303,129,0	1/1:2,15:17:19.42:488,19,0	1/1:0,14:14:33.11:885,33,0	1/1:16,17:33:75.60:1725,76,0	1/1:5,8:14:21.07:525,21,0	1/1:1,24:26:48.16:1292,48,0	1/1:6,18:24:69.23:1764,69,0	1/1:7,21:27:84.27:2061,84,0	1/1:1,8:9:3.01:81,3,0
chr10	27495813	.	G	GTAGATAGA	5401.85	PASS	AB=0.979;AC=45;AF=0.900;AN=50;BaseQRankSum=-1.136;DP=546;FS=1.023;HRun=0;HaplotypeScore=225.7711;InbreedingCoeff=0.1513;MQ=50.62;MQ0=9;MQRankSum=-0.133;QD=11.85;ReadPosRankSum=-1.225;VQSLOD=3.7198;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:19,1:20:6.02:187,6,0	1/1:9,1:10:6:144,6,0	./.	./.	1/1:25,1:26:14.81:145,15,0	1/1:30,0:30:15.05:440,15,0	1/1:10,0:10:5.21:30,5,0	1/1:31,0:29:1.82:5,2,0	0/0:34,0:34:39.07:0,39,698	1/1:17,1:18:17.95:319,18,0	1/1:20,1:21:21.02:388,21,0	1/1:11,2:13:12.04:463,12,0	1/1:21,0:21:15.04:259,15,0	1/1:15,0:15:11.99:193,12,0	0/1:23,0:22:11.10:126,0,11	1/1:14,0:14:6.02:156,6,0	0/1:22,0:21:27.50:77,0,28	1/1:9,0:8:9.17:100,9,0	1/1:7,0:6:3.01:54,3,0	0/1:41,3:44:98.32:460,0,98	1/1:9,0:9:2.99:50,3,0	1/1:11,0:11:6.01:75,6,0	1/1:17,2:19:14.98:238,15,0	1/1:7,2:9:2.69:24,3,0	1/1:25,0:25:12.01:193,12,0	1/1:22,2:24:27.06:644,27,0	1/1:22,2:23:27:632,27,0	./.
chr10	27495869	.	AAG	A	236.12	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=5.306;DP=466;FS=2.986;HRun=0;HaplotypeScore=119.2581;InbreedingCoeff=0.3008;MQ=52.48;MQ0=3;MQRankSum=-5.677;QD=4.07;ReadPosRankSum=-4.890;VQSLOD=1.0170;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:19,1:20:13.05:0,13,848	0/0:8,0:8:21.96:0,22,421	0/0:19,0:12:32.96:0,33,583	0/0:11,0:6:18.04:0,18,316	0/0:26,0:26:69.69:0,70,1353	0/1:24,0:24:81.96:82,0,911	0/0:14,0:13:36.10:0,36,646	0/0:30,0:28:84.28:0,84,1568	0/0:27,0:27:72.05:0,72,1287	0/0:14,0:14:42.08:0,42,803	0/1:18,0:18:20.32:20,0,805	0/0:10,0:10:30.10:0,30,572	0/0:13,0:13:14.52:0,15,518	0/0:10,0:10:24.96:0,25,452	1/1:0,7:6:15.05:238,15,0	0/0:9,0:9:8.67:0,9,445	0/0:14,0:14:36.08:0,36,548	0/0:12,0:11:30.10:0,30,585	0/0:13,0:12:36.12:0,36,718	0/0:22,0:22:12.43:0,12,1021	0/0:12,0:12:21.35:0,21,374	0/0:13,0:13:39.13:0,39,777	0/0:26,0:26:43.02:0,43,1222	0/0:8,0:8:12.04:0,12,198	0/0:26,0:26:24.02:0,24,1051	0/0:21,0:21:62.98:0,63,1150	0/0:30,0:30:68.18:0,68,1605	0/1:9,0:9:15.68:16,0,424
chr10	27495896	.	TGATA	T	2730.12	PASS	AB=0.948;AC=18;AF=0.346;AN=52;BaseQRankSum=2.014;DP=537;FS=2.639;HRun=0;HaplotypeScore=134.5591;InbreedingCoeff=0.6049;MQ=54.32;MQ0=8;MQRankSum=0.298;QD=12.82;ReadPosRankSum=1.779;VQSLOD=3.3870;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,10:25:26.80:390,27,0	1/1:5,5:10:21.07:321,21,0	./.	./.	0/0:42,0:42:63.22:0,63,1459	0/1:22,1:23:18.86:19,0,510	0/0:12,0:11:3.01:0,3,57	0/0:29,0:26:0:0,0,0	0/0:22,0:27:20.78:0,21,147	0/0:22,0:22:45.15:0,45,955	0/0:20,1:21:39.13:0,39,903	0/0:11,0:11:12.04:0,12,275	0/0:10,0:10:15.05:0,15,348	0/0:9,0:10:5.85:0,6,72	0/1:2,0:5:3.75:7,0,4	1/1:9,0:12:3.92:52,4,0	0/0:18,0:23:18.78:0,19,407	1/1:10,2:12:12.04:178,12,0	0/0:16,0:15:15.35:0,15,183	0/0:22,0:27:8.24:0,8,74	0/0:12,0:18:9.34:0,9,75	0/0:21,0:21:36.12:0,36,795	0/1:25,0:26:0.85:1,0,821	0/0:8,0:8:15.05:0,15,350	1/1:15,6:25:36.12:550,36,0	0/1:15,4:20:99:251,0,116	1/1:25,5:31:42.14:638,42,0	1/1:10,10:22:30.67:501,31,0
chr10	27495972	.	CT	C	8683.85	PASS	AB=0.810;AC=50;AF=0.893;AN=56;BaseQRankSum=-7.357;DP=542;FS=14.936;HRun=11;HaplotypeScore=98.4053;InbreedingCoeff=0.6110;MQ=64.40;MQ0=0;MQRankSum=-2.258;QD=17.30;ReadPosRankSum=1.988;VQSLOD=4.3300;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,20:25:53.51:443,54,0	1/1:5,1:6:8.96:74,9,0	0/1:17,0:10:7.64:8,0,80	0/0:17,0:12:19.15:0,19,219	1/1:9,25:35:50.09:548,50,0	1/1:5,18:23:48.54:395,49,0	1/1:0,8:8:14.98:123,15,0	1/1:11,17:28:59.77:492,60,0	0/1:5,8:13:5.10:170,0,5	1/1:7,30:37:86.81:710,87,0	1/1:4,15:19:41.81:335,42,0	1/1:3,12:15:29.96:246,30,0	1/1:2,12:14:26.97:222,27,0	1/1:1,10:11:26.96:222,27,0	0/0:3,0:23:41.15:0,41,204	1/1:2,6:8:17.97:148,18,0	1/1:2,18:20:35.92:295,36,0	1/1:1,4:5:1.32:85,1,0	1/1:6,16:22:47.91:392,48,0	1/1:5,28:33:76.81:619,77,0	1/1:6,8:14:38.90:313,39,0	1/1:2,19:21:53.92:442,54,0	1/1:0,14:14:38.05:304,38,0	1/1:2,7:9:17.96:148,18,0	1/1:6,18:25:26.04:327,26,0	1/1:3,21:24:62.90:517,63,0	1/1:2,25:27:65.90:541,66,0	1/1:5,24:29:50.85:567,51,0
chr10	27496749	.	TG	T	15972.05	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=6.821;DP=451;FS=10.567;HRun=1;HaplotypeScore=82.4166;InbreedingCoeff=0.9590;MQ=75.35;MQ0=0;MQRankSum=-3.033;QD=39.15;ReadPosRankSum=2.764;VQSLOD=4.9686;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,22:22:60.20:838,60,0	1/1:0,12:12:33.11:461,33,0	0/0:9,0:9:12.40:0,12,369	0/0:10,0:10:20.20:0,20,343	1/1:0,19:19:54.18:755,54,0	1/1:0,21:21:60.20:838,60,0	1/1:0,10:10:27.09:377,27,0	1/1:0,25:25:69.20:930,69,0	1/1:0,9:9:27.09:378,27,0	1/1:0,23:23:69.19:914,69,0	1/1:0,24:24:66.15:898,66,0	1/1:0,15:15:42.14:587,42,0	1/1:0,20:20:57.19:796,57,0	1/1:0,17:17:48.16:671,48,0	0/0:24,0:24:72.23:0,72,1124	1/1:0,10:10:27.09:377,27,0	1/1:0,24:24:69.23:965,69,0	1/1:0,10:10:30.10:419,30,0	1/1:0,16:16:48.16:671,48,0	1/1:0,17:17:48.16:671,48,0	1/1:0,12:12:30.10:419,30,0	1/1:0,3:3:8.99:104,9,0	1/1:0,7:7:21.07:294,21,0	1/1:0,7:7:15.05:210,15,0	1/1:0,16:16:39.13:545,39,0	1/1:0,28:28:84.26:1141,84,0	1/1:0,24:24:72.24:1000,72,0	1/1:0,17:17:51.17:713,51,0
chr10	27497248	.	AT	A	9055.85	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=5.959;DP=326;FS=74.814;HRun=3;HaplotypeScore=35.7374;InbreedingCoeff=0.9763;MQ=98.41;MQ0=0;MQRankSum=-8.109;QD=35.24;ReadPosRankSum=2.831;VQSLOD=-0.5622;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,8:8:21.06:256,21,0	1/1:0,5:5:15.05:186,15,0	0/0:25,0:25:66.18:0,66,905	0/0:14,0:14:21.12:0,21,405	1/1:0,9:9:24.08:297,24,0	1/1:0,12:12:33.10:409,33,0	1/1:0,12:12:33.10:409,33,0	1/1:0,15:15:45.14:558,45,0	1/1:1,7:8:21.07:260,21,0	1/1:2,13:15:39.12:482,39,0	1/1:0,6:6:18.06:223,18,0	1/1:0,12:12:36.11:446,36,0	1/1:1,8:9:24.08:297,24,0	1/1:0,11:11:30.09:372,30,0	0/0:30,0:30:90.30:0,90,1296	1/1:0,9:9:27.08:335,27,0	1/1:0,13:13:36.11:446,36,0	1/1:0,9:9:27.08:335,27,0	1/1:0,8:8:24.08:297,24,0	1/1:0,12:12:36.11:446,36,0	1/1:0,10:10:27.08:330,27,0	1/1:0,11:11:33.10:409,33,0	1/1:1,12:13:36.11:445,36,0	1/1:0,11:11:33.10:409,33,0	1/1:0,7:7:21.07:260,21,0	1/1:0,13:13:39.12:483,39,0	1/1:0,14:14:39.12:481,39,0	1/1:0,5:5:15.05:186,15,0
chr10	27497533	.	C	CA	20058.75	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-4.811;DP=574;FS=3.652;HRun=4;HaplotypeScore=55.2856;InbreedingCoeff=0.8814;MQ=66.03;MQ0=0;MQRankSum=-2.400;QD=37.28;ReadPosRankSum=2.281;VQSLOD=5.0959;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,19:19:48.16:657,48,0	1/1:0,10:10:30.10:410,30,0	0/0:6,0:6:2.91:0,3,63	0/0:6,0:6:5.05:0,5,89	1/1:1,22:23:63.17:841,63,0	1/1:1,25:26:72.24:985,72,0	1/1:0,9:9:27.09:369,27,0	1/1:1,32:33:96.32:1312,96,0	1/1:3,18:21:54.18:739,54,0	1/1:1,29:30:87.27:1171,87,0	1/1:2,28:30:81.26:1096,81,0	1/1:0,15:15:42.14:575,42,0	1/1:0,12:12:33.11:452,33,0	1/1:3,23:26:72.22:961,72,0	0/0:24,0:24:66.11:0,66,701	1/1:0,20:20:57.19:780,57,0	1/1:1,18:19:45.15:615,45,0	1/1:1,11:12:30.10:410,30,0	1/1:1,19:20:57.16:759,57,0	1/1:3,28:31:78.17:1024,78,0	1/1:3,17:20:51.17:698,51,0	1/1:0,17:17:45.15:615,45,0	1/1:0,23:23:63.21:861,63,0	1/1:2,12:14:36.12:493,36,0	1/1:0,22:22:63.21:861,63,0	1/1:1,39:40:99:1620,120,0	1/1:3,31:33:93.31:1263,93,0	1/1:0,12:12:36.12:493,36,0
chr10	27499513	.	A	AAT	4594.37	PASS	AB=1.000;AC=51;AF=0.911;AN=56;BaseQRankSum=5.206;DP=541;FS=8.706;HRun=0;HaplotypeScore=124.1536;InbreedingCoeff=0.4570;MQ=58.74;MQ0=10;MQRankSum=-4.426;QD=9.23;ReadPosRankSum=0.563;VQSLOD=4.1957;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:21:8.70:65,9,0	1/1:8,0:8:3.01:33,3,0	0/0:19,0:10:24.02:0,24,240	0/0:24,0:13:12.77:0,13,175	1/1:24,0:23:24.49:160,24,0	1/1:24,0:24:17.72:157,18,0	1/1:17,0:17:3.38:34,3,0	1/1:28,0:27:63.42:614,63,0	1/1:16,1:17:28.63:212,29,0	1/1:26,1:27:65.66:592,66,0	1/1:20,1:21:15.97:125,16,0	1/1:11,0:11:5.95:52,6,0	1/1:18,3:21:23.99:296,24,0	1/1:15,0:15:11.76:103,12,0	0/1:43,0:43:55.67:56,0,121	1/1:19,1:20:11.93:104,12,0	1/1:10,0:10:3.01:35,3,0	1/1:8,0:8:6.02:67,6,0	1/1:10,0:10:23.88:210,24,0	1/1:23,0:23:35.19:243,35,0	1/1:22,0:20:33.28:252,33,0	1/1:18,2:20:20.53:193,21,0	1/1:21,0:21:17.92:171,18,0	1/1:14,1:15:2.94:18,3,0	1/1:11,0:11:11.99:120,12,0	1/1:20,0:19:40.82:317,41,0	1/1:27,0:27:25.25:331,25,0	1/1:13,0:13:3.01:33,3,0
chr10	27499516	.	A	ATGTG	4796.93	PASS	AB=1.000;AC=51;AF=0.981;AN=52;DP=552;FS=0.000;HRun=0;HaplotypeScore=134.8715;InbreedingCoeff=0.0884;MQ=57.33;MQ0=14;QD=9.35;VQSLOD=4.0196;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,0:23:5.93:71,6,0	1/1:7,0:7:3.01:41,3,0	0/1:20,0:10:0:0,0,0	./.	1/1:24,0:23:8.83:87,9,0	1/1:19,0:21:17.07:203,17,0	1/1:17,0:17:6.02:87,6,0	1/1:28,0:27:29.55:252,30,0	1/1:13,4:19:3.01:56,3,0	1/1:27,0:27:26.95:395,27,0	1/1:19,0:20:21.13:213,21,0	1/1:11,0:11:3.01:42,3,0	1/1:19,0:19:21.07:314,21,0	1/1:17,0:18:11.06:126,11,0	1/1:14,25:42:45.15:1030,45,0	1/1:21,0:21:8.94:131,9,0	1/1:1,0:11:3.01:46,3,0	1/1:8,0:8:6.02:80,6,0	1/1:10,0:10:11.93:129,12,0	1/1:25,0:24:18.03:208,18,0	1/1:25,0:23:5.84:48,6,0	1/1:21,0:21:19.12:240,19,0	1/1:22,0:22:11.62:173,12,0	./.	1/1:11,0:11:12.04:157,12,0	1/1:18,0:18:12.51:185,13,0	1/1:27,0:28:32.64:443,33,0	1/1:13,0:13:3.01:41,3,0
chr10	27499517	.	T	TATGTGTGG	17233.51	PASS	AB=0.568;AC=49;AF=0.875;AN=56;BaseQRankSum=-3.276;DP=657;FS=6.392;HRun=0;HaplotypeScore=152.8473;InbreedingCoeff=0.6191;MQ=56.06;MQ0=14;MQRankSum=-5.391;QD=30.34;ReadPosRankSum=0.482;VQSLOD=4.0800;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:25,1:25:16.95:244,17,0	1/1:1,6:9:6.02:178,6,0	0/0:21,0:10:24.01:0,24,373	0/0:26,0:12:26.35:0,26,423	1/1:5,22:28:12.11:625,12,0	1/1:4,15:24:15.05:639,15,0	0/1:5,12:21:6.25:185,0,6	1/1:36,0:35:66.99:2012,67,0	1/1:21,1:22:38.46:631,38,0	1/1:7,22:32:81.19:2058,81,0	1/1:3,14:20:20.99:577,21,0	1/1:2,11:14:12:332,12,0	1/1:10,14:32:36.59:1244,37,0	1/1:6,14:23:11.95:450,12,0	0/0:42,0:42:41.61:0,42,379	1/1:5,14:27:14.75:470,15,0	1/1:7,1:8:6.01:166,6,0	1/1:1,8:9:6.02:277,6,0	1/1:4,4:12:16.48:504,16,0	1/1:7,20:30:45.01:1246,45,0	1/1:27,0:25:43.43:709,43,0	1/1:12,16:35:10.12:845,10,0	1/1:3,18:28:0.52:602,1,0	1/1:6,9:21:2.98:38,3,0	1/1:3,9:13:15.01:567,15,0	1/1:3,14:21:51.52:962,52,0	1/1:2,21:31:35.90:1465,36,0	1/1:1,10:14:6.02:210,6,0
chr10	27499519	.	T	TGTGG	4566.66	PASS	AB=0.991;AC=33;AF=0.589;AN=56;BaseQRankSum=6.712;DP=623;FS=25.919;HRun=0;HaplotypeScore=169.6309;InbreedingCoeff=-0.1916;MQ=52.38;MQ0=16;MQRankSum=-6.258;QD=8.62;ReadPosRankSum=7.314;VQSLOD=2.1309;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:22:33.73:34,0,37	1/1:9,0:9:4.25:41,4,0	0/0:20,0:8:17.76:0,18,159	0/0:27,0:12:26.03:0,26,277	0/1:25,0:24:70.37:70,0,71	1/1:20,0:20:16.77:194,17,0	0/1:20,0:20:13.89:112,0,14	0/1:34,0:33:92.76:344,0,93	0/1:21,1:22:56.60:97,0,57	0/1:33,0:33:25.79:473,0,26	1/1:13,2:15:7.21:137,7,0	0/1:14,0:14:18.74:65,0,19	0/1:29,2:31:20.77:379,0,21	1/1:24,0:24:12.02:120,12,0	0/1:43,0:43:99:646,0,149	0/1:25,1:26:0:149,0,0	1/1:7,0:7:3.48:39,3,0	0/1:10,0:10:13.91:67,0,14	0/1:13,0:12:42.92:75,0,43	0/1:26,0:25:75.84:236,0,76	0/0:27,0:25:1.53:0,2,54	1/1:32,1:33:6.21:280,6,0	0/1:26,0:26:48.74:128,0,49	0/0:17,2:19:5.79:0,6,37	1/1:13,0:13:12.92:148,13,0	0/1:20,0:19:6.40:245,0,6	1/1:31,0:31:35.43:415,35,0	1/1:11,0:11:6.02:71,6,0
chr10	27499670	.	ATG	A	301.95	PASS	AB=0.737;AC=38;AF=0.731;AN=52;BaseQRankSum=3.921;DP=492;FS=3.572;HRun=0;HaplotypeScore=212.4338;InbreedingCoeff=0.3833;MQ=44.28;MQ0=1;MQRankSum=-4.052;QD=0.85;ReadPosRankSum=3.462;VQSLOD=2.7258;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:8,5:13:0.24:0,0,2	1/1:3,12:15:5.06:21,5,0	0/1:14,0:9:10.95:11,0,18	0/0:21,0:16:14.51:0,15,113	1/1:11,17:28:2.79:14,3,0	0/0:4,11:15:2.97:0,3,10	0/1:7,6:13:0.03:0,0,0	1/1:17,9:26:13.70:39,14,0	0/1:5,7:12:0:0,0,0	1/1:12,16:28:21.68:74,22,0	1/1:7,10:17:2.84:14,3,0	1/1:11,7:18:7.05:40,7,0	1/1:6,11:17:2.72:17,3,0	1/1:6,11:17:5.68:28,6,0	0/0:36,0:35:18.77:0,19,106	0/0:11,10:21:3.51:0,4,13	1/1:5,3:8:2.04:6,2,0	1/1:1,1:2:0.47:1,0,0	1/1:13,2:15:0.89:2,1,0	0/1:10,14:24:1.72:20,0,2	1/1:10,8:18:2.55:14,3,0	./.	1/1:3,12:15:5.68:28,6,0	./.	1/1:6,13:19:5.68:28,6,0	1/1:10,16:26:15:48,15,0	1/1:8,11:19:4.88:18,5,0	1/1:2,4:6:3.81:10,4,0
chr10	27499930	.	A	AG	17991.49	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-3.025;DP=619;FS=2.319;HRun=0;HaplotypeScore=102.8165;InbreedingCoeff=0.9974;MQ=75.31;MQ0=0;MQRankSum=-6.159;QD=32.24;ReadPosRankSum=6.214;VQSLOD=4.3836;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,23:24:68.27:861,68,0	1/1:0,18:18:45.27:606,45,0	0/0:18,0:18:54.12:0,54,719	0/0:13,0:13:36.11:0,36,488	1/1:1,34:35:75.97:956,76,0	1/1:0,28:28:84.27:1057,84,0	1/1:0,17:17:51.16:638,51,0	1/1:3,33:36:99:1257,99,0	1/1:1,13:14:24.08:302,24,0	1/1:2,36:38:99:1406,111,0	1/1:0,23:23:63.18:794,63,0	1/1:1,22:23:35.47:649,35,0	1/1:0,20:20:42.27:553,42,0	1/1:2,21:23:50.05:633,50,0	0/0:30,0:30:50.35:0,50,314	1/1:2,25:27:64.97:812,65,0	1/1:2,15:17:45.14:568,45,0	1/1:0,11:11:33.11:420,33,0	1/1:3,17:20:42.42:605,42,0	1/1:1,22:23:60.13:750,60,0	1/1:3,13:16:35.11:453,35,0	1/1:2,26:28:65.81:855,66,0	1/1:0,18:18:51.16:649,51,0	1/1:0,13:13:33.11:417,33,0	1/1:1,18:19:47.75:601,48,0	1/1:2,22:24:65.59:850,66,0	1/1:2,32:33:81.39:1043,81,0	1/1:0,9:9:21.07:255,21,0
chr10	27499931	.	T	TA	19755.57	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-1.031;DP=617;FS=3.605;HRun=5;HaplotypeScore=96.8588;InbreedingCoeff=0.9938;MQ=76.05;MQ0=0;MQRankSum=-8.213;QD=33.77;ReadPosRankSum=4.352;VQSLOD=4.7451;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:24:69.22:894,69,0	1/1:18,0:18:48.16:622,48,0	0/0:19,0:19:42.09:0,42,443	0/0:13,0:13:35.92:0,36,342	1/1:34,0:34:81.18:1012,81,0	1/1:28,0:28:84.27:1089,84,0	1/1:17,0:17:51.17:661,51,0	1/1:38,0:38:99:1349,108,0	1/1:12,0:12:24.08:311,24,0	1/1:38,0:38:99:1432,111,0	1/1:23,0:23:66.17:836,66,0	1/1:22,1:23:54.18:700,54,0	1/1:20,0:20:45.15:583,45,0	1/1:21,0:21:50.53:631,51,0	1/1:1,29:30:75.24:987,75,0	1/1:27,0:27:65.94:856,66,0	1/1:17,0:17:45.15:583,45,0	1/1:11,0:11:33.11:427,33,0	1/1:20,0:20:20.06:586,20,0	1/1:21,1:22:66.14:813,66,0	1/1:16,0:16:39.11:490,39,0	1/1:28,0:28:72.22:920,72,0	1/1:20,0:20:51.17:658,51,0	1/1:12,0:12:33.11:427,33,0	1/1:19,0:19:48.16:622,48,0	1/1:24,0:24:69.22:880,69,0	1/1:34,0:33:87.27:1113,87,0	1/1:9,0:9:21.07:272,21,0
chr10	27502061	.	G	GT	19982.92	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-1.278;DP=628;FS=0.000;HRun=1;HaplotypeScore=81.0279;InbreedingCoeff=0.9910;MQ=76.44;MQ0=0;MQRankSum=-4.360;QD=35.06;ReadPosRankSum=4.077;VQSLOD=4.7898;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,19:20:45.15:669,45,0	1/1:1,9:10:27.03:361,27,0	0/0:17,0:17:27.97:0,28,352	0/0:8,0:8:14.10:0,14,135	1/1:1,27:28:74.70:1006,75,0	1/1:0,18:18:42.14:626,42,0	1/1:1,19:20:38.55:581,39,0	1/1:0,31:31:93.22:1304,93,0	1/1:1,26:27:54.18:801,54,0	1/1:2,24:26:78.18:1063,78,0	1/1:1,23:24:62.86:854,63,0	1/1:2,20:22:42.14:626,42,0	1/1:3,24:27:76.13:1101,76,0	1/1:0,25:25:66.22:984,66,0	0/0:33,0:33:87.19:0,87,1039	1/1:1,22:23:63.21:940,63,0	1/1:2,14:16:27.09:401,27,0	1/1:4,7:11:23.77:313,24,0	1/1:5,18:23:60.08:768,60,0	1/1:2,31:33:96:1299,96,0	1/1:1,19:20:36.11:518,36,0	1/1:0,17:17:39.09:557,39,0	1/1:4,26:30:68.92:1023,69,0	1/1:1,14:15:42.06:592,42,0	1/1:1,20:21:45.15:654,45,0	1/1:1,22:23:66.59:843,67,0	1/1:0,36:36:93.21:1385,93,0	1/1:0,24:24:48.16:712,48,0
chr10	27502062	.	T	TTA	9610.59	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=7.874;DP=625;FS=2.404;HRun=0;HaplotypeScore=129.9082;InbreedingCoeff=0.9908;MQ=75.14;MQ0=0;MQRankSum=-4.412;QD=16.92;ReadPosRankSum=4.954;VQSLOD=5.0581;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:19:44.50:300,44,0	1/1:9,1:10:26.74:220,27,0	0/0:15,0:15:25.60:0,26,406	0/0:8,0:8:14.12:0,14,141	1/1:28,0:28:54.25:436,54,0	1/1:18,0:18:41.54:281,42,0	1/1:20,0:20:33.85:255,34,0	1/1:31,0:31:87.90:597,88,0	1/1:26,0:26:53.41:383,53,0	1/1:26,1:28:73.35:551,73,0	1/1:22,0:22:62.09:411,62,0	1/1:21,0:21:41.55:282,42,0	1/1:26,1:27:54.73:516,55,0	1/1:25,0:25:65.28:442,65,0	0/0:31,0:34:90.18:0,90,1283	1/1:23,0:23:62.31:423,62,0	1/1:15,0:15:29.29:189,29,0	1/1:10,1:11:23.43:197,23,0	1/1:21,1:22:56.37:456,56,0	1/1:33,1:34:94.91:694,95,0	1/1:18,0:18:35.64:247,36,0	1/1:17,0:17:38.61:271,39,0	1/1:30,0:30:45.65:431,46,0	1/1:14,0:15:41.29:290,41,0	1/1:22,1:23:44.54:341,45,0	1/1:24,0:24:59.81:444,60,0	1/1:37,0:37:91.97:621,92,0	1/1:24,0:24:50.19:331,50,0
chr10	27502399	.	T	TTG	26495.68	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-10.508;DP=627;FS=1.789;HRun=0;HaplotypeScore=60.2401;InbreedingCoeff=0.9885;MQ=81.42;MQ0=2;MQRankSum=-6.750;QD=46.48;ReadPosRankSum=3.851;VQSLOD=6.1156;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,23:24:69.24:1224,69,0	1/1:1,9:10:27.09:479,27,0	0/0:17,0:17:48.04:0,48,606	0/0:15,0:15:36.23:0,36,445	1/1:3,27:30:78.27:1384,78,0	1/1:1,32:33:90.31:1597,90,0	1/1:1,12:13:36.12:639,36,0	1/1:5,26:32:81.25:1374,81,0	1/1:0,24:24:69.24:1224,69,0	1/1:2,43:45:99:2311,132,0	1/1:0,23:23:63.22:1118,63,0	1/1:2,15:17:42.14:745,42,0	1/1:3,29:32:84.29:1490,84,0	1/1:0,14:15:42.14:742,42,0	0/0:25,0:25:72.23:0,72,975	1/1:1,22:23:51.17:905,51,0	1/1:2,20:22:57.20:1007,57,0	1/1:1,13:14:39.13:691,39,0	1/1:2,13:15:39.13:675,39,0	1/1:3,30:34:87.29:1475,87,0	1/1:1,17:17:42.14:745,42,0	1/1:0,24:23:63.21:1101,63,0	1/1:3,20:23:63.21:1089,63,0	1/1:1,11:12:33.11:582,33,0	1/1:1,24:25:63.22:1118,63,0	1/1:1,18:19:54.16:918,54,0	1/1:4,33:37:93.32:1648,93,0	1/1:0,4:6:12.04:213,12,0
chr10	27505368	.	GA	G	10845.32	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=2.888;DP=465;FS=7.382;HRun=7;HaplotypeScore=54.1258;InbreedingCoeff=0.9841;MQ=86.19;MQ0=0;MQRankSum=-6.437;QD=26.84;ReadPosRankSum=4.553;VQSLOD=5.3330;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,19:20:42.09:428,42,0	1/1:0,4:4:12.03:122,12,0	0/0:20,0:21:41.87:0,42,499	0/0:22,0:21:43.50:0,43,486	1/1:1,13:14:36.08:367,36,0	1/1:4,26:30:78.18:796,78,0	1/1:1,12:13:36.08:367,36,0	1/1:2,19:21:57.12:574,57,0	1/1:2,24:26:66.15:673,66,0	1/1:0,28:28:84.19:857,84,0	1/1:0,8:8:24.05:245,24,0	1/1:0,18:18:54.12:551,54,0	1/1:2,15:17:42.09:429,42,0	1/1:0,7:7:21.05:214,21,0	0/0:18,0:18:51.15:0,51,629	1/1:0,9:9:27.06:276,27,0	1/1:1,16:17:45.10:459,45,0	1/1:0,10:10:27.06:275,27,0	1/1:0,20:20:60.12:606,60,0	1/1:2,16:18:45.09:459,45,0	1/1:2,13:15:39.09:398,39,0	1/1:3,14:17:39.08:398,39,0	1/1:1,11:12:33.07:337,33,0	1/1:1,10:11:27.06:276,27,0	1/1:0,16:16:39.09:398,39,0	1/1:1,19:20:57.11:575,57,0	1/1:6,20:26:54.12:551,54,0	1/1:0,7:7:21.05:214,21,0
chr10	27505633	.	TA	T	2024.43	PASS	AB=1.000;AC=33;AF=0.635;AN=52;BaseQRankSum=-5.554;DP=227;FS=8.225;HRun=4;HaplotypeScore=51.4160;InbreedingCoeff=0.3764;MQ=67.90;MQ0=1;MQRankSum=2.935;QD=12.34;ReadPosRankSum=-5.840;VQSLOD=-0.3138;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:8,0:8:8.34:79,8,0	./.	0/0:10,0:9:24.07:0,24,310	0/1:4,0:3:18.16:18,0,66	1/1:1,11:12:24.07:287,24,0	0/1:14,0:14:4.77:21,0,5	1/1:0,3:3:6.02:72,6,0	1/1:41,0:35:57.91:674,58,0	0/0:10,0:10:3.74:0,4,10	0/1:6,0:6:2.07:58,0,2	1/1:6,0:6:13.62:170,14,0	1/1:2,4:6:2.95:38,3,0	0/1:7,0:7:1.13:25,0,1	1/1:2,0:2:0.96:26,1,0	0/0:5,0:5:12.04:0,12,166	0/1:4,0:4:1.16:22,0,1	1/1:16,0:16:7.54:98,8,0	1/1:5,0:5:3:28,3,0	1/1:13,0:14:7.97:260,8,0	1/1:8,0:8:11.25:167,11,0	1/1:4,0:4:6.01:65,6,0	./.	1/1:1,1:2:3.01:36,3,0	1/1:1,1:1:3.01:35,3,0	0/0:10,0:10:3.74:0,4,9	0/0:5,0:5:4.42:0,4,13	0/0:12,0:12:4.98:0,5,13	0/0:10,0:10:7.48:0,7,20
chr10	27505634	.	A	AAATAAAT	10772.31	PASS	AC=46;AF=0.885;AN=52;BaseQRankSum=-3.169;DP=246;FS=1.117;HRun=0;HaplotypeScore=42.6576;InbreedingCoeff=0.6357;MQ=67.78;MQ0=1;MQRankSum=-5.332;QD=47.67;ReadPosRankSum=2.477;VQSLOD=4.2443;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,7:10:15.05:477,15,0	./.	0/0:10,0:9:24.07:0,24,326	0/0:3,0:3:6.49:0,6,78	1/1:12,0:12:24.07:312,24,0	1/1:1,11:12:18.06:678,18,0	1/1:3,0:3:6.02:72,6,0	1/1:12,23:36:90.24:1828,90,0	1/1:1,9:11:9.03:362,9,0	1/1:0,6:7:18.04:556,18,0	1/1:0,5:7:21.06:331,21,0	1/1:5,1:7:9.03:300,9,0	1/1:3,4:7:15.05:452,15,0	1/1:0,2:2:6.02:241,6,0	0/0:5,0:5:12.04:0,12,204	1/1:0,5:7:9.03:362,9,0	1/1:4,12:16:28.34:835,28,0	1/1:0,5:6:3.01:121,3,0	1/1:3,12:16:45.15:1103,45,0	1/1:0,8:10:24.08:455,24,0	1/1:1,4:5:6.02:239,6,0	./.	1/1:1,0:1:3.01:36,3,0	1/1:1,1:1:3.01:83,3,0	1/1:1,8:12:12.04:453,12,0	1/1:1,5:7:11.60:313,12,0	1/1:1,10:12:15.02:440,15,0	1/1:0,10:12:18.06:725,18,0
chr10	27506282	.	T	TA	17864.84	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=0.808;DP=674;FS=4.010;HRun=8;HaplotypeScore=134.2346;InbreedingCoeff=0.9889;MQ=73.26;MQ0=0;MQRankSum=-8.101;QD=28.00;ReadPosRankSum=4.612;VQSLOD=3.2136;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,36:38:99:1142,99,0	1/1:1,8:9:24.04:263,24,0	0/0:17,0:18:15.99:0,16,305	0/0:18,0:18:31.97:0,32,266	1/1:2,25:27:60.14:676,60,0	1/1:3,18:21:48.14:554,48,0	1/1:0,16:16:42.12:485,42,0	1/1:6,32:38:96.27:1096,96,0	1/1:1,25:26:72.21:831,72,0	1/1:3,19:22:57.17:658,57,0	1/1:2,25:27:66.20:761,66,0	1/1:1,19:20:48.14:554,48,0	1/1:4,34:38:87.26:1004,87,0	1/1:1,18:19:54.16:623,54,0	1/1:2,26:28:75.22:866,75,0	1/1:2,24:26:63.19:727,63,0	1/1:2,24:26:69.21:796,69,0	1/1:0,18:18:48.14:554,48,0	1/1:3,8:11:21.06:241,21,0	1/1:9,29:38:75.19:851,75,0	1/1:3,12:15:36.11:415,36,0	1/1:1,20:21:51.11:574,51,0	1/1:5,25:31:78.06:871,78,0	1/1:2,19:21:51.15:589,51,0	1/1:3,22:25:63.11:698,63,0	1/1:4,25:29:75.22:866,75,0	1/1:9,29:38:81.16:905,81,0	1/1:3,7:10:24.05:264,24,0
chr10	27506457	.	TA	T	12375.83	PASS	AB=0.933;AC=51;AF=0.911;AN=56;BaseQRankSum=7.644;DP=626;FS=19.238;HRun=10;HaplotypeScore=183.2816;InbreedingCoeff=0.7803;MQ=67.79;MQ0=0;MQRankSum=-3.307;QD=21.23;ReadPosRankSum=3.320;VQSLOD=3.2664;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,20:24:41.95:364,42,0	1/1:0,11:11:32.99:286,33,0	0/1:13,1:14:27.87:28,0,145	0/0:12,0:13:32.84:0,33,270	1/1:6,30:36:86.96:755,87,0	1/1:2,17:19:50.99:443,51,0	1/1:4,14:18:41.92:364,42,0	1/1:9,28:37:80.95:699,81,0	1/1:3,20:23:50.95:442,51,0	1/1:3,25:28:71.87:624,72,0	1/1:4,23:27:65.94:573,66,0	1/1:2,16:18:47.93:409,48,0	1/1:3,26:29:77.96:677,78,0	1/1:3,12:15:32.95:286,33,0	0/0:30,0:30:84.20:0,84,912	1/1:1,14:15:38.97:338,39,0	1/1:1,10:11:29.99:260,30,0	1/1:4,17:21:47.98:417,48,0	1/1:3,17:20:47.91:416,48,0	1/1:4,37:41:99:885,102,0	1/1:3,21:24:59.96:521,60,0	1/1:1,17:18:47.98:416,48,0	1/1:2,20:22:56.96:495,57,0	1/1:2,20:22:59.99:520,60,0	1/1:2,19:21:50.99:442,51,0	1/1:0,23:23:68.99:598,69,0	1/1:4,26:30:80.96:699,81,0	1/1:0,16:16:47.99:417,48,0
chr10	27506637	.	ATGTTTCTT	A	25876.04	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=6.346;DP=426;FS=37.718;HRun=0;HaplotypeScore=182.1037;InbreedingCoeff=0.9368;MQ=55.49;MQ0=0;MQRankSum=-8.622;QD=67.21;ReadPosRankSum=3.725;VQSLOD=3.3497;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,15:18:27.09:739,27,0	1/1:0,7:7:18.06:479,18,0	0/0:14,0:13:27.26:0,27,838	0/0:9,0:9:24.03:0,24,788	1/1:0,23:23:63.17:1569,63,0	1/1:0,20:20:51.18:1490,51,0	1/1:0,9:9:18.06:526,18,0	1/1:1,13:14:39.07:912,39,0	1/1:1,9:10:15.05:390,15,0	1/1:1,23:24:63.08:1527,63,0	1/1:0,21:21:57.19:1467,57,0	1/1:0,17:17:45.15:1314,45,0	1/1:0,17:17:45.15:1314,45,0	1/1:0,11:11:21.07:613,21,0	0/0:18,0:18:51.14:0,51,2007	1/1:0,8:8:21.07:613,21,0	1/1:0,14:14:27.09:751,27,0	1/1:0,10:10:21.07:614,21,0	1/1:0,19:18:51.08:1111,51,0	1/1:1,24:25:72.25:2053,72,0	1/1:2,0:2:5.97:59,6,0	1/1:0,17:17:48.16:1302,48,0	1/1:1,22:23:60.20:1653,60,0	1/1:1,6:7:12.04:349,12,0	1/1:1,17:18:48.16:1402,48,0	1/1:0,20:20:56.79:1530,57,0	1/1:1,18:19:39.13:1138,39,0	1/1:1,11:12:33.11:963,33,0
chr10	27507896	.	A	AAAATAAATAAATAAATAAAT	15563.70	PASS	AC=44;AF=0.880;AN=50;BaseQRankSum=-1.713;DP=308;FS=4.933;HRun=0;HaplotypeScore=147.6943;InbreedingCoeff=0.5097;MQ=70.18;MQ0=1;MQRankSum=-3.510;QD=61.27;ReadPosRankSum=0.914;VQSLOD=4.4668;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:2,2:4:3.01:280,3,0	1/1:6,0:9:9.03:838,9,0	0/0:14,0:9:5.93:0,6,62	0/0:17,0:13:2.77:0,3,75	1/1:6,3:14:12.04:409,12,0	1/1:3,0:9:9.03:544,9,0	1/1:4,0:5:6.02:203,6,0	1/1:36,0:43:54.18:1559,54,0	1/1:8,0:8:3.01:49,3,0	1/1:7,0:8:9.03:437,9,0	1/1:5,1:7:6.02:385,6,0	1/1:4,0:6:6.02:383,6,0	./.	1/1:4,0:4:6.02:265,6,0	0/0:10,0:10:12.03:0,12,283	1/1:3,0:5:9.03:467,9,0	1/1:9,0:17:24.08:1515,24,0	1/1:8,2:14:15.05:1081,15,0	1/1:5,3:15:30.09:1672,30,0	1/1:9,4:16:12.04:876,12,0	./.	1/1:8,0:8:6.02:91,6,0	1/1:5,0:6:3.01:276,3,0	./.	1/1:9,0:13:33.09:1342,33,0	1/1:2,0:5:9.02:313,9,0	1/1:11,0:14:18.06:953,18,0	1/1:9,0:21:27.05:1627,27,0
chr10	27507927	.	A	AT	220.66	PASS	AB=0.852;AC=6;AF=0.107;AN=56;BaseQRankSum=5.183;DP=256;FS=8.945;HRun=0;HaplotypeScore=47.2298;InbreedingCoeff=-0.1712;MQ=55.84;MQ0=0;MQRankSum=-4.380;QD=2.94;ReadPosRankSum=2.444;VQSLOD=1.2993;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:3,0:3:5.89:0,6,57	0/0:4,0:4:12.04:0,12,167	0/0:4,0:3:6.02:0,6,84	0/0:6,0:4:3.01:0,3,42	0/0:17,0:17:45.15:0,45,622	0/0:6,0:6:15.04:0,15,167	0/0:3,0:3:9.03:0,9,126	0/0:33,0:31:93.30:0,93,1280	0/0:2,0:2:3.01:0,3,42	0/1:10,2:12:50.45:50,0,366	0/0:5,0:5:11.61:0,12,119	0/0:8,0:8:24.05:0,24,300	0/0:1,0:1:3.01:0,3,42	0/1:4,2:6:63.90:64,0,150	0/0:10,0:10:27.08:0,27,360	0/0:4,0:4:12.04:0,12,167	0/1:12,1:13:10.47:10,0,369	0/0:12,0:12:27.04:0,27,325	0/0:24,0:24:69.22:0,69,943	0/0:18,0:18:45.15:0,45,608	0/0:3,0:3:9.03:0,9,126	0/0:2,0:2:6.02:0,6,84	0/0:8,0:8:21.07:0,21,293	0/0:2,0:2:6.02:0,6,84	0/1:11,3:14:99:117,0,284	0/0:6,0:6:18.05:0,18,237	0/1:9,2:11:54.73:55,0,251	0/1:17,2:19:44:44,0,361
chr10	27508610	.	G	GA	15825.56	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-9.180;DP=579;FS=27.037;HRun=7;HaplotypeScore=53.1446;InbreedingCoeff=0.9967;MQ=86.10;MQ0=0;MQRankSum=-7.420;QD=30.61;ReadPosRankSum=2.950;VQSLOD=3.0752;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,29:29:75.19:889,75,0	1/1:1,7:8:21.06:254,21,0	0/0:15,0:15:36:0,36,335	0/0:22,0:22:43.43:0,43,428	1/1:2,27:29:75.06:840,75,0	1/1:3,20:23:51.16:616,51,0	1/1:2,18:20:54.17:652,54,0	1/1:4,12:16:36.10:425,36,0	1/1:1,17:18:48.15:580,48,0	1/1:2,29:31:87.26:1040,87,0	1/1:5,17:22:48.10:560,48,0	1/1:0,12:12:30.09:362,30,0	1/1:1,20:21:57.17:689,57,0	1/1:2,19:21:51.16:616,51,0	0/0:24,1:25:33.06:0,33,601	1/1:1,21:22:63.19:761,63,0	1/1:2,25:27:72.22:870,72,0	1/1:0,10:10:27.05:309,27,0	1/1:5,18:23:57.12:638,57,0	1/1:4,29:34:93.07:1066,93,0	1/1:1,10:11:27.08:326,27,0	1/1:2,15:17:42.08:481,42,0	1/1:3,18:21:54.16:642,54,0	1/1:0,16:16:36.11:435,36,0	1/1:2,21:23:60.18:725,60,0	1/1:3,25:28:75.21:891,75,0	1/1:1,25:26:72.22:870,72,0	1/1:0,9:9:24.07:290,24,0
chr10	27508921	.	AG	A	22090.60	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=10.008;DP=647;FS=0.000;HRun=1;HaplotypeScore=123.8287;InbreedingCoeff=0.9792;MQ=68.95;MQ0=1;MQRankSum=-2.994;QD=40.02;ReadPosRankSum=4.965;VQSLOD=4.2126;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,49:49:99:1972,141,0	1/1:0,3:3:9.03:124,9,0	0/0:34,0:28:83.07:0,83,1255	0/0:27,0:26:70.11:0,70,1053	1/1:0,19:18:51.13:691,51,0	1/1:0,20:20:57.19:797,57,0	1/1:0,20:20:57.19:797,57,0	1/1:1,34:35:99:1410,102,0	1/1:0,23:23:69.23:962,69,0	1/1:0,19:19:57.16:777,57,0	1/1:0,13:13:36.12:502,36,0	1/1:0,22:22:66.22:923,66,0	1/1:0,22:22:66.22:923,66,0	1/1:0,26:26:69.23:965,69,0	0/0:34,0:34:99:0,102,1608	1/1:0,17:17:48.16:668,48,0	1/1:1,32:33:51.45:1271,51,0	1/1:1,24:25:28.56:958,29,0	1/1:0,19:19:57.18:774,57,0	1/1:0,27:27:78.22:1066,78,0	1/1:1,21:22:48.04:847,48,0	1/1:0,13:13:39.13:546,39,0	1/1:0,16:16:45.15:628,45,0	1/1:0,21:21:63.21:881,63,0	1/1:0,14:14:39.13:546,39,0	1/1:0,27:27:81.27:1133,81,0	1/1:0,34:34:99:1385,99,0	1/1:0,13:13:39.13:545,39,0
chr10	27509315	.	G	GGAGA	27888.60	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=0.203;DP=532;FS=2.872;HRun=0;HaplotypeScore=121.9523;InbreedingCoeff=0.9224;MQ=55.08;MQ0=0;MQRankSum=-1.944;QD=58.34;ReadPosRankSum=3.928;VQSLOD=6.7731;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:13,31:44:99:2582,99,0	1/1:1,2:3:9.03:236,9,0	0/0:20,0:17:42.09:0,42,682	0/0:21,0:19:48.64:0,49,867	1/1:0,15:15:20.83:550,21,0	1/1:1,15:16:36.12:937,36,0	1/1:3,23:26:69.24:1681,69,0	1/1:12,14:25:60.20:1520,60,0	1/1:2,9:12:27.09:707,27,0	1/1:4,17:22:63.19:1522,63,0	1/1:1,14:15:36.12:945,36,0	1/1:2,18:21:57.20:1485,57,0	1/1:1,16:17:42.14:1106,42,0	1/1:2,19:21:57.20:1501,57,0	0/0:13,0:13:36.11:0,36,454	1/1:4,13:17:45.15:1131,45,0	1/1:3,32:36:92.99:2380,93,0	1/1:10,14:25:56.70:1246,57,0	1/1:3,10:11:33.11:745,33,0	1/1:3,15:18:39.13:1027,39,0	1/1:5,30:34:60.21:1580,60,0	1/1:2,6:10:12.04:311,12,0	1/1:0,8:8:15.05:395,15,0	1/1:2,24:26:59.82:1581,60,0	1/1:5,17:22:36.01:938,36,0	1/1:2,16:18:48.16:1230,48,0	1/1:0,8:7:15.05:396,15,0	1/1:0,2:2:6.02:158,6,0
chr10	27510590	.	G	GACAC	9916.45	PASS	AB=0.854;AC=50;AF=0.926;AN=54;BaseQRankSum=-3.611;DP=561;FS=1.610;HRun=0;HaplotypeScore=94.6208;InbreedingCoeff=0.2702;MQ=59.35;MQ0=8;MQRankSum=1.785;QD=19.03;ReadPosRankSum=2.660;VQSLOD=4.6572;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,19:39:31.74:714,32,0	1/1:1,2:4:5.89:87,6,0	./.	0/0:20,0:13:3.01:0,3,40	1/1:14,7:23:20.33:384,20,0	1/1:6,18:28:20.54:384,21,0	1/1:7,10:18:16.68:388,17,0	0/1:30,0:31:3.98:243,0,4	1/1:7,9:17:20.81:443,21,0	1/1:14,10:25:38.30:767,38,0	1/1:11,10:21:26.83:543,27,0	1/1:3,5:10:8.75:110,9,0	1/1:7,8:16:6.19:417,6,0	1/1:7,9:17:17.46:311,17,0	1/1:9,0:21:15.05:249,15,0	1/1:8,10:22:26.56:497,27,0	1/1:8,8:17:18.06:431,18,0	1/1:1,2:6:8.77:156,9,0	1/1:12,0:15:14.61:178,15,0	0/1:17,1:28:3.37:207,0,3	1/1:11,2:13:26.25:237,26,0	1/1:14,4:18:26.41:564,26,0	1/1:14,2:15:21.69:409,22,0	1/1:15,16:33:35.59:744,36,0	1/1:12,5:19:15.27:416,15,0	1/1:10,6:17:22.76:391,23,0	1/1:11,12:27:29.31:503,29,0	1/1:8,5:13:6.02:144,6,0
chr10	27510719	.	C	CTTTT	8568.19	PASS	AB=0.708;AC=50;AF=0.893;AN=56;BaseQRankSum=-6.214;DP=514;FS=4.224;HRun=11;HaplotypeScore=92.1227;InbreedingCoeff=0.2802;MQ=74.24;MQ0=0;MQRankSum=-3.671;QD=17.45;ReadPosRankSum=-0.790;VQSLOD=2.6595;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:6,1:22:36.91:411,0,37	1/1:4,0:11:20.94:223,21,0	0/0:23,0:21:14.29:0,14,239	0/1:16,0:13:10.30:10,0,145	1/1:4,1:27:44.26:594,44,0	1/1:6,0:22:19.18:240,19,0	1/1:1,5:10:13.11:266,13,0	1/1:13,0:39:65.19:747,65,0	1/1:4,0:18:24.06:285,24,0	1/1:8,1:24:40.07:534,40,0	1/1:3,0:19:38.94:428,39,0	0/1:4,0:10:11.62:100,0,12	1/1:2,0:16:19.12:276,19,0	1/1:2,0:14:14.44:137,14,0	0/1:5,0:17:5.45:5,0,11	1/1:2,0:17:22.11:295,22,0	1/1:1,0:17:30.01:352,30,0	1/1:2,1:9:15.05:218,15,0	1/1:9,0:17:24.04:294,24,0	1/1:5,0:24:45.88:486,46,0	1/1:5,0:14:14.11:144,14,0	1/1:5,0:22:39.04:482,39,0	1/1:3,1:21:31.96:437,32,0	1/1:3,0:17:1.08:435,1,0	1/1:4,2:20:23.91:322,24,0	1/1:6,0:19:33.80:336,34,0	1/1:3,0:17:25.05:328,25,0	1/1:3,1:10:12.04:181,12,0
chr10	27511429	.	C	CCACACT	50979.04	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-6.173;DP=645;FS=4.783;HRun=0;HaplotypeScore=116.4777;InbreedingCoeff=0.9382;MQ=74.70;MQ0=0;MQRankSum=-10.643;QD=84.68;ReadPosRankSum=5.103;VQSLOD=6.4670;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,17:25:57.20:1987,57,0	1/1:0,9:9:27.09:970,27,0	0/0:20,0:20:57.19:0,57,1301	0/0:23,0:23:66.19:0,66,1453	1/1:2,30:36:84.29:2896,84,0	1/1:3,25:31:81.28:2874,81,0	1/1:2,11:14:30.10:1076,30,0	1/1:8,15:29:81.26:2419,81,0	1/1:4,22:29:75.26:2693,75,0	1/1:6,20:26:75.26:2609,75,0	1/1:2,23:26:69.24:2445,69,0	1/1:5,12:18:39.13:1331,39,0	1/1:1,26:30:78.27:2784,78,0	1/1:1,27:28:78.27:2799,78,0	1/1:7,20:27:75.26:2642,75,0	1/1:4,19:26:54.19:1940,54,0	1/1:5,8:16:33.11:1153,33,0	1/1:0,5:5:9.03:324,9,0	1/1:8,10:21:57.16:1798,57,0	1/1:11,20:36:75.26:2617,75,0	1/1:4,10:16:30.10:1078,30,0	1/1:3,15:22:39.13:1398,39,0	1/1:5,27:36:84.15:3002,84,0	1/1:5,4:10:18.05:482,18,0	1/1:5,27:34:81.28:2904,81,0	1/1:6,12:19:54.19:1917,54,0	1/1:5,22:27:72.25:2521,72,0	1/1:1,2:6:9.03:321,9,0
chr10	27515200	.	G	GT	17276.37	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-6.185;DP=564;FS=10.455;HRun=6;HaplotypeScore=48.4566;InbreedingCoeff=0.9699;MQ=73.88;MQ0=0;MQRankSum=-7.007;QD=31.88;ReadPosRankSum=4.163;VQSLOD=4.5244;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,16:21:48.15:598,48,0	1/1:0,6:6:12.04:151,12,0	0/0:13,0:13:30.06:0,30,302	0/0:9,0:9:21:0,21,198	1/1:4,24:28:75.22:927,75,0	1/1:5,21:26:63.20:790,63,0	1/1:0,7:7:18.06:226,18,0	1/1:5,21:27:66.15:775,66,0	1/1:1,17:18:48.15:604,48,0	1/1:1,24:25:72.22:892,72,0	1/1:1,19:20:48.15:604,48,0	1/1:0,21:21:60.19:755,60,0	1/1:1,25:26:69.22:868,69,0	1/1:3,21:24:60.19:755,60,0	1/1:2,7:9:15.05:189,15,0	1/1:1,16:17:45.14:566,45,0	1/1:2,14:16:36.12:453,36,0	1/1:2,17:19:45.14:566,45,0	1/1:2,16:18:48.15:603,48,0	1/1:5,25:30:78.22:963,78,0	1/1:0,22:22:57.18:717,57,0	1/1:3,17:20:48.11:581,48,0	1/1:4,23:27:63.20:787,63,0	1/1:1,14:15:42.13:526,42,0	1/1:1,24:25:69.22:868,69,0	1/1:3,29:32:84.26:1043,84,0	1/1:3,29:32:84.27:1053,84,0	1/1:0,11:11:33.11:415,33,0
chr10	27515464	.	TCA	T	2825.09	PASS	AB=0.990;AC=32;AF=0.571;AN=56;BaseQRankSum=10.832;DP=568;FS=0.854;HRun=0;HaplotypeScore=145.6045;InbreedingCoeff=-0.4664;MQ=66.70;MQ0=8;MQRankSum=-2.353;QD=6.26;ReadPosRankSum=12.151;VQSLOD=0.8810;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:25:36.13:128,0,36	1/1:8,0:8:14.05:80,14,0	0/0:40,0:25:8.13:0,8,580	0/0:74,0:38:34.22:0,34,651	0/1:14,0:14:21.78:73,0,22	1/1:25,0:25:6.53:189,7,0	0/1:19,0:17:30.56:115,0,31	0/1:20,0:20:81.16:116,0,81	0/1:13,1:14:24.62:25,0,55	1/1:13,1:14:4.44:140,4,0	0/1:9,1:10:32.43:75,0,32	0/1:9,0:9:31.70:44,0,32	1/1:14,0:14:4.33:114,4,0	1/1:15,2:17:42.69:277,43,0	1/1:18,1:19:23.29:261,23,0	0/1:17,0:17:50.02:50,0,52	0/1:26,0:26:30.54:213,0,31	0/1:14,0:14:24.35:74,0,24	0/1:17,0:17:76.86:77,0,131	0/1:10,0:10:48.65:76,0,49	0/1:18,0:17:6.29:6,0,56	0/1:21,0:21:51.48:129,0,51	0/1:25,0:25:25.97:178,0,26	0/1:20,0:20:4.29:78,0,4	0/1:14,0:13:4.97:86,0,5	0/1:26,0:26:99:129,0,147	0/1:21,1:22:82.86:161,0,83	0/1:13,0:13:57.49:90,0,57
chr10	27515466	.	ACT	A	9237.93	PASS	AB=1.000;AC=53;AF=0.946;AN=56;BaseQRankSum=1.502;DP=559;FS=17.306;HRun=0;HaplotypeScore=125.7530;InbreedingCoeff=0.5162;MQ=65.70;MQ0=10;MQRankSum=1.993;QD=19.05;ReadPosRankSum=5.816;VQSLOD=3.7730;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,16:25:30.05:354,30,0	1/1:0,8:8:14.99:168,15,0	0/1:46,0:27:8.55:9,0,333	0/0:72,0:36:8.09:0,8,403	1/1:5,8:13:21.50:261,22,0	1/1:2,22:24:54.13:652,54,0	1/1:4,15:17:36.07:429,36,0	1/1:5,16:21:48.09:553,48,0	1/1:4,9:13:5.30:73,5,0	1/1:2,12:14:39.09:444,39,0	1/1:2,7:9:15:167,15,0	1/1:3,5:8:12.04:149,12,0	1/1:2,12:14:29.96:349,30,0	1/1:8,9:17:41.18:467,41,0	1/1:3,15:18:51.12:604,51,0	1/1:3,11:15:20.90:237,21,0	1/1:6,20:26:53.83:651,54,0	1/1:4,10:14:24.02:279,24,0	1/1:7,9:16:5.79:278,6,0	1/1:4,7:11:18.05:223,18,0	1/1:6,11:17:17.84:136,18,0	1/1:4,17:21:42:468,42,0	1/1:6,18:24:38.86:482,39,0	1/1:3,17:20:21.01:243,21,0	1/1:2,11:13:27.08:335,27,0	1/1:11,13:24:42.02:491,42,0	1/1:8,14:22:35.74:400,36,0	1/1:4,9:13:27.08:335,27,0
chr10	27515506	.	C	CTGTGTGTGTG	7459.96	PASS	AB=0.966;AC=44;AF=0.846;AN=52;BaseQRankSum=-4.059;DP=597;FS=4.978;HRun=0;HaplotypeScore=263.3927;InbreedingCoeff=0.3975;MQ=52.69;MQ0=19;MQRankSum=-0.357;QD=15.48;ReadPosRankSum=-2.238;VQSLOD=3.1959;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:25:4.53:96,5,0	./.	0/0:37,0:19:1.82:0,2,5	./.	1/1:22,2:24:6.43:115,6,0	1/1:26,1:27:17.82:505,18,0	1/1:26,0:23:8.41:151,8,0	0/1:27,0:25:54.02:582,0,54	1/1:17,0:17:12.01:357,12,0	1/1:19,0:20:24.01:703,24,0	1/1:10,0:11:6.89:76,7,0	1/1:23,2:21:9.90:207,10,0	1/1:21,2:22:14.17:574,14,0	1/1:19,0:18:3.01:66,3,0	0/0:17,0:17:23.67:0,24,428	1/1:12,2:16:12.04:453,12,0	1/1:23,1:24:15.05:495,15,0	1/1:10,0:12:15.05:501,15,0	1/1:24,0:22:16.28:485,16,0	1/1:15,0:16:5.08:75,5,0	0/0:20,0:18:0:0,0,0	1/1:24,0:22:7.72:195,8,0	0/1:25,1:27:0.45:0,0,1	1/1:15,2:18:6.81:298,7,0	1/1:13,1:14:6.58:52,7,0	1/1:27,0:26:32.90:997,33,0	1/1:19,1:18:8.77:254,9,0	1/1:11,0:11:12.49:223,12,0
chr10	27515531	.	TGTGTGTGCGC	T	3649.45	PASS	AB=1.000;AC=27;AF=0.482;AN=56;BaseQRankSum=-8.983;DP=503;FS=6.403;HRun=0;HaplotypeScore=193.5104;InbreedingCoeff=-0.6922;MQ=39.27;MQ0=15;MQRankSum=3.725;QD=7.73;ReadPosRankSum=-5.668;VQSLOD=0.1516;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:27:99:148,0,262	0/0:9,0:9:3.01:0,3,37	0/0:3,0:2:5.99:0,6,67	0/1:7,0:2:21.51:22,0,37	0/1:26,0:24:91.97:92,0,361	0/1:22,0:22:21.57:22,0,442	0/0:19,0:15:8.86:0,9,216	0/1:30,0:27:99:231,0,1061	0/1:17,0:17:32.84:33,0,326	0/1:18,0:18:74:74,0,905	0/1:12,0:12:99:167,0,225	0/1:28,0:24:99:146,0,507	0/1:22,0:20:99:119,0,439	0/1:17,0:17:99:222,0,139	1/1:2,14:16:27.08:835,27,0	0/1:14,0:14:99:129,0,178	0/1:18,0:18:99:139,0,456	0/1:9,0:9:99:100,0,415	0/1:17,0:15:99:113,0,591	0/1:15,0:15:81.62:82,0,179	1/1:22,0:20:12.51:192,13,0	0/1:21,0:18:23.78:24,0,399	0/1:22,0:22:36.54:37,0,137	0/1:18,0:18:99:125,0,235	0/1:15,0:14:99:121,0,393	0/1:25,0:24:76.89:77,0,1358	0/1:21,0:19:99:217,0,489	0/1:13,0:13:99:184,0,378
chr10	27517118	.	TCCCCATTCC	T	441.94	PASS	AB=0.948;AC=16;AF=0.348;AN=46;BaseQRankSum=0.883;DP=240;FS=2.342;HRun=0;HaplotypeScore=60.4570;InbreedingCoeff=0.0277;MQ=47.07;MQ0=23;MQRankSum=0.772;QD=6.50;ReadPosRankSum=0.605;VQSLOD=1.0117;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:5:5.70:0,6,30	./.	0/0:34,0:11:33.04:0,33,901	0/0:55,0:15:38.99:0,39,782	0/0:8,3:11:3.01:0,3,30	0/1:6,0:6:8.56:9,0,12	./.	0/0:8,0:6:5.41:0,5,59	0/1:6,0:5:29.40:47,0,29	0/1:3,0:3:11.60:42,0,12	0/0:7,0:6:2.84:0,3,14	0/0:6,0:6:4.78:0,5,22	1/1:8,0:7:5.97:64,6,0	0/1:7,0:7:36.35:36,0,72	0/1:7,0:7:6.31:6,0,11	0/0:2,0:1:0.89:0,1,2	1/1:2,0:2:4.26:61,4,0	1/1:5,0:5:6.02:133,6,0	0/1:7,0:6:0.25:0,0,97	0/0:7,0:7:4.07:0,4,42	./.	./.	0/0:6,3:8:1.41:0,1,2	1/1:3,0:1:0.47:1,0,0	0/0:4,0:4:0.47:0,0,1	0/1:6,3:9:74.78:103,0,75	0/1:4,1:4:55.27:65,0,55	./.
chr10	27517121	.	CCAT	C	515.24	PASS	AB=0.766;AC=22;AF=0.524;AN=42;BaseQRankSum=1.737;DP=226;FS=25.612;HRun=0;HaplotypeScore=48.2772;InbreedingCoeff=0.1674;MQ=48.30;MQ0=22;MQRankSum=0.352;QD=6.78;ReadPosRankSum=-0.615;VQSLOD=0.6991;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:3,4:5:8.96:9,0,18	./.	0/0:34,0:11:33.11:0,33,692	0/0:55,0:15:39.04:0,39,661	0/0:7,1:8:2.88:0,3,15	1/1:5,1:7:4.40:64,4,0	./.	0/1:5,2:5:44.49:46,0,44	1/1:5,0:5:5.25:47,5,0	1/1:0,0:1:3:26,3,0	./.	1/1:1,4:5:9.81:105,10,0	1/1:4,3:6:6.01:82,6,0	1/1:3,4:6:4.56:50,5,0	0/0:4,1:5:4.75:0,5,23	0/1:1,1:1:0:0,0,0	1/1:1,0:2:3.48:39,3,0	1/1:2,1:4:6:70,6,0	0/1:6,1:6:29.83:30,0,72	0/0:7,0:7:3.75:0,4,32	./.	./.	0/0:6,2:8:0:0,0,1	./.	0/0:2,0:2:0:0,0,0	0/1:6,1:8:28.82:55,0,29	0/1:4,2:5:24.22:24,0,39	./.
chr10	27517127	.	C	CCTCTCTCT	1450.70	PASS	AB=1.000;AC=39;AF=0.886;AN=44;BaseQRankSum=-1.981;DP=255;FS=3.114;HRun=0;HaplotypeScore=67.7609;InbreedingCoeff=0.2960;MQ=47.40;MQ0=23;MQRankSum=1.444;QD=10.83;ReadPosRankSum=-1.377;VQSLOD=1.7420;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	1/1:1,0:1:0.47:1,0,0	./.	./.	./.	1/1:12,0:10:3.53:61,4,0	./.	1/1:9,0:8:6.02:142,6,0	1/1:4,0:5:9.01:130,9,0	1/1:6,0:5:12.51:277,13,0	1/1:9,0:7:3.01:48,3,0	1/1:7,1:8:6.01:71,6,0	1/1:5,0:5:3.01:57,3,0	1/1:8,0:6:3.01:68,3,0	0/0:7,0:7:5.76:0,6,78	1/1:4,0:3:0.31:1,0,0	1/1:4,0:3:6.49:128,6,0	1/1:4,0:4:3.86:107,4,0	1/1:10,0:8:3:26,3,0	1/1:5,2:8:0.89:2,1,0	1/1:6,0:5:3:25,3,0	0/0:10,0:8:0.47:0,0,1	0/1:8,0:7:0:1,0,0	./.	1/1:4,0:4:2.98:22,3,0	1/1:11,0:11:17.19:245,17,0	1/1:7,0:5:6.02:127,6,0	1/1:4,0:1:0.47:1,0,0
chr10	27517164	.	CTCTCTGTGTGTG	C	91.70	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.659;DP=281;FS=2.978;HRun=0;HaplotypeScore=96.6949;InbreedingCoeff=0.5076;MQ=50.56;MQ0=14;MQRankSum=-2.570;QD=10.19;ReadPosRankSum=1.955;VQSLOD=1.4219;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:9:15.05:0,15,472	0/0:4,0:4:9.50:0,10,345	0/0:8,0:6:18.06:0,18,702	0/0:23,0:13:33.64:0,34,1081	0/0:14,0:14:27.09:0,27,906	0/0:14,0:12:12.51:0,13,458	0/0:7,0:7:6.02:0,6,200	0/0:17,0:15:42.58:0,43,1228	0/0:10,0:9:24.08:0,24,870	0/0:11,0:10:30.10:0,30,1260	0/0:15,0:13:36.12:0,36,1266	0/0:6,0:6:9.03:0,9,356	0/0:7,0:6:12.04:0,12,392	0/0:9,0:8:21.07:0,21,749	1/1:3,6:9:6.02:172,6,0	0/0:8,0:8:12.93:0,13,415	0/0:6,0:5:10.28:0,10,299	0/0:7,0:7:17.15:0,17,531	0/0:5,0:3:9.03:0,9,221	0/0:13,0:13:27.56:0,28,837	0/0:9,0:9:15.05:0,15,605	0/0:10,0:9:9.03:0,9,320	0/0:13,0:12:18.06:0,18,585	0/0:7,0:7:9.50:0,10,292	0/0:5,0:5:12.04:0,12,462	0/0:16,0:16:42.03:0,42,1272	0/0:11,0:9:27.09:0,27,900	0/0:7,0:6:15.52:0,16,465
chr10	27517572	.	C	CT	14072.91	PASS	AB=0.549;AC=51;AF=0.911;AN=56;BaseQRankSum=-6.914;DP=542;FS=17.807;HRun=8;HaplotypeScore=54.9568;InbreedingCoeff=0.7697;MQ=75.57;MQ0=1;MQRankSum=-4.895;QD=27.81;ReadPosRankSum=3.983;VQSLOD=3.4632;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,17:20:20.69:491,21,0	1/1:0,11:11:33.10:381,33,0	0/0:14,0:12:18.46:0,18,164	0/0:21,0:17:20.10:0,20,193	1/1:3,32:35:93.27:1068,93,0	1/1:1,17:19:50.94:554,51,0	1/1:3,8:11:20.98:221,21,0	1/1:7,29:36:83.90:949,84,0	1/1:1,16:17:48.14:554,48,0	1/1:4,22:26:66.20:762,66,0	1/1:1,29:30:90.26:1030,90,0	1/1:0,14:14:36.11:415,36,0	1/1:5,15:20:45.13:519,45,0	1/1:2,14:16:39.12:450,39,0	1/1:1,15:16:42.12:485,42,0	1/1:1,15:16:42.12:485,42,0	1/1:3,27:30:75.20:849,75,0	1/1:8,20:28:38.74:697,39,0	0/1:5,23:28:1.20:727,0,1	1/1:2,20:22:60.09:661,60,0	1/1:1,7:9:21.53:244,22,0	1/1:4,9:13:27.08:310,27,0	1/1:1,10:11:5.64:287,6,0	1/1:0,7:7:18.05:208,18,0	1/1:1,12:13:33.10:381,33,0	1/1:3,17:20:54.14:608,54,0	1/1:6,21:28:60.01:669,60,0	1/1:7,3:10:6.02:69,6,0
chr10	27519334	.	AC	A	11986.20	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-0.201;DP=588;FS=2.332;HRun=6;HaplotypeScore=63.1983;InbreedingCoeff=0.8358;MQ=43.18;MQ0=19;MQRankSum=3.383;QD=21.67;ReadPosRankSum=2.452;VQSLOD=4.2756;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,37:39:75.18:800,75,0	1/1:3,9:12:27.07:290,27,0	0/0:15,0:2:6.02:0,6,79	0/0:20,0:4:6.02:0,6,79	1/1:1,22:23:51.13:548,51,0	1/1:1,24:23:48.12:514,48,0	1/1:2,14:14:15.04:161,15,0	1/1:7,3:7:9.02:97,9,0	1/1:3,18:20:33.08:354,33,0	1/1:3,23:23:63.16:676,63,0	1/1:3,18:21:45.11:483,45,0	1/1:1,16:15:36.09:386,36,0	1/1:1,17:15:39.10:419,39,0	1/1:4,20:22:45.11:483,45,0	1/1:2,25:25:54.14:580,54,0	1/1:2,18:18:39.09:419,39,0	1/1:1,31:29:63.16:674,63,0	1/1:3,13:16:29.86:321,30,0	1/1:3,10:10:27.07:290,27,0	1/1:2,20:22:48.11:510,48,0	1/1:1,22:22:42.10:451,42,0	1/1:1,30:29:66.17:708,66,0	1/1:1,21:22:54.14:580,54,0	1/1:3,16:19:42.11:451,42,0	1/1:1,16:17:39.10:419,39,0	1/1:3,25:25:60.10:632,60,0	1/1:0,24:22:54.14:579,54,0	1/1:1,5:6:15.04:161,15,0
chr10	27528960	.	TA	T	453.46	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.014;DP=523;FS=1.949;HRun=6;HaplotypeScore=57.3906;InbreedingCoeff=0.7929;MQ=78.97;MQ0=0;MQRankSum=-2.185;QD=21.59;ReadPosRankSum=0.951;VQSLOD=2.9106;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:54.18:0,54,710	0/0:11,0:11:33.11:0,33,434	0/0:21,0:21:51.10:0,51,635	0/0:11,0:11:0.41:0,0,253	0/0:27,0:27:81.25:0,81,1051	0/0:22,0:22:66.20:0,66,854	0/0:18,0:18:48.14:0,48,616	0/0:18,0:18:51.17:0,51,668	0/0:27,0:27:78.25:0,78,1025	0/0:19,0:19:57.19:0,57,749	0/0:19,0:19:57.19:0,57,750	0/0:13,0:13:39.13:0,39,513	0/0:25,0:25:72.23:0,72,947	0/0:20,0:20:60.18:0,60,774	1/1:2,19:21:51.13:548,51,0	0/0:18,0:18:48.16:0,48,632	0/0:14,0:14:39.08:0,39,493	0/0:6,0:6:18.02:0,18,218	0/0:20,0:20:57.18:0,57,746	0/0:27,0:27:75.20:0,75,967	0/0:13,0:13:36.10:0,36,459	0/0:17,0:17:48.10:0,48,598	0/0:15,0:15:45.15:0,45,586	0/0:23,0:23:69.17:0,69,874	0/0:22,0:22:60.20:0,60,789	0/0:22,0:22:60.20:0,60,790	0/0:23,0:23:69.22:0,69,908	0/0:12,0:12:33.07:0,33,402
chr10	27529678	.	C	CA	12428.52	PASS	AB=0.866;AC=54;AF=0.964;AN=56;BaseQRankSum=-0.792;DP=486;FS=2.188;HRun=7;HaplotypeScore=194.9234;InbreedingCoeff=-0.0328;MQ=51.24;MQ0=1;MQRankSum=-1.158;QD=25.57;ReadPosRankSum=0.665;VQSLOD=2.3921;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,9:16:36.10:422,36,0	1/1:2,5:7:18.01:198,18,0	0/1:6,1:7:0.70:19,0,1	0/1:5,0:6:11.62:36,0,12	1/1:7,15:22:45.13:526,45,0	1/1:1,19:20:57.17:669,57,0	1/1:3,12:15:36.11:425,36,0	1/1:9,18:27:57.17:680,57,0	1/1:4,13:17:42.13:497,42,0	1/1:7,19:26:63.19:751,63,0	1/1:6,5:11:21.03:227,21,0	1/1:8,11:19:36.11:431,36,0	1/1:10,19:29:63.18:736,63,0	1/1:5,17:22:51.14:595,51,0	1/1:6,13:19:39.12:460,39,0	1/1:4,11:15:36.09:414,36,0	1/1:4,5:9:18.93:207,19,0	1/1:1,1:1:3.01:36,3,0	1/1:5,14:19:45.08:510,45,0	1/1:7,19:26:44.47:694,44,0	1/1:5,3:8:10.81:97,11,0	1/1:4,17:21:54.62:628,55,0	1/1:6,26:32:78.19:905,78,0	1/1:4,2:5:6.02:73,6,0	1/1:4,13:17:39.12:463,39,0	1/1:9,20:29:63.19:755,63,0	1/1:12,20:31:69.18:798,69,0	1/1:2,5:7:15.05:179,15,0
chr10	27529686	.	CA	C	6433.62	PASS	AB=0.875;AC=53;AF=0.946;AN=56;BaseQRankSum=3.850;DP=456;FS=25.980;HRun=7;HaplotypeScore=188.4957;InbreedingCoeff=0.4864;MQ=57.46;MQ0=1;MQRankSum=0.886;QD=14.33;ReadPosRankSum=5.238;VQSLOD=2.5569;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:16:43.17:259,43,0	1/1:6,0:6:15.86:77,16,0	0/0:6,0:7:7.71:0,8,43	0/1:5,0:7:26.39:26,0,64	1/1:21,1:22:52.61:319,53,0	1/1:19,0:19:53.62:270,54,0	1/1:13,2:15:43.32:276,43,0	1/1:27,1:28:58.89:425,59,0	1/1:15,0:15:34.84:188,35,0	1/1:23,0:23:59.70:350,60,0	1/1:12,1:13:29.41:196,29,0	1/1:15,1:16:40.41:258,40,0	1/1:23,1:24:61.34:355,61,0	1/1:20,0:20:45.03:232,45,0	1/1:15,1:16:39.46:247,39,0	1/1:14,0:14:33.37:204,33,0	1/1:7,0:7:19.78:98,20,0	1/1:2,0:1:2.88:15,3,0	1/1:21,1:22:50.55:372,51,0	1/1:26,0:26:56.68:333,57,0	1/1:5,0:5:11.45:70,11,0	1/1:20,0:20:56.27:295,56,0	1/1:30,1:31:83.33:450,83,0	1/1:6,0:5:12.88:85,13,0	1/1:13,0:13:37.27:191,37,0	1/1:25,0:25:65.87:422,66,0	1/1:30,0:29:45.15:280,45,0	1/1:5,3:8:20.39:139,20,0
chr10	27529687	.	A	AAC	23966.56	PASS	AB=1.000;AC=55;AF=0.982;AN=56;BaseQRankSum=-0.399;DP=465;FS=9.900;HRun=0;HaplotypeScore=135.0095;InbreedingCoeff=-0.0342;MQ=56.34;MQ0=1;MQRankSum=-2.947;QD=51.54;ReadPosRankSum=2.555;VQSLOD=4.8051;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,13:16:45.13:814,45,0	1/1:0,5:6:18.06:325,18,0	1/1:5,1:6:1.28:69,1,0	0/1:7,0:7:47.20:97,0,47	1/1:4,18:22:66.23:1228,66,0	1/1:1,18:20:57.19:1075,57,0	1/1:3,12:15:45.15:832,45,0	1/1:10,21:31:75.23:1304,75,0	1/1:1,14:15:45.15:859,45,0	1/1:2,21:23:69.22:1266,69,0	1/1:4,8:13:33.11:598,33,0	1/1:4,12:16:42.14:803,42,0	1/1:2,22:24:72.25:1369,72,0	1/1:1,20:21:57.20:1082,57,0	1/1:2,14:16:48.16:910,48,0	1/1:1,13:14:42.14:778,42,0	1/1:1,6:7:21.07:396,21,0	1/1:1,1:1:3.01:57,3,0	1/1:6,16:22:63.21:1117,63,0	1/1:0,27:27:75.26:1426,75,0	1/1:0,5:5:15.05:281,15,0	1/1:2,18:20:60.21:1138,60,0	1/1:3,28:31:93.32:1748,93,0	1/1:4,3:6:15.05:268,15,0	1/1:0,13:13:39.13:744,39,0	1/1:4,21:25:75.26:1412,75,0	1/1:3,29:31:84.29:1569,84,0	1/1:4,5:9:21.07:398,21,0
chr10	27533222	.	A	AGT	13766.21	PASS	AB=0.609;AC=49;AF=0.875;AN=56;BaseQRankSum=-4.553;DP=665;FS=10.641;HRun=0;HaplotypeScore=90.3457;InbreedingCoeff=0.4243;MQ=72.17;MQ0=10;MQRankSum=1.289;QD=23.41;ReadPosRankSum=3.802;VQSLOD=5.0678;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,21:32:44.61:699,45,0	0/1:3,10:13:4.55:381,0,5	0/0:44,0:29:29.81:0,30,322	0/0:32,0:22:15.02:0,15,168	0/1:13,18:32:15.04:693,0,15	1/1:6,21:27:51.17:793,51,0	1/1:9,14:23:10.48:619,10,0	1/1:25,11:37:36.56:533,37,0	1/1:7,11:18:27.09:420,27,0	1/1:10,12:22:7.43:538,7,0	1/1:5,16:23:13.49:665,13,0	1/1:7,10:17:21.07:323,21,0	1/1:5,14:19:8.47:572,8,0	1/1:11,10:21:27.09:415,27,0	1/1:17,0:17:3.01:45,3,0	1/1:5,12:17:36.12:560,36,0	1/1:14,16:31:36.12:560,36,0	1/1:7,2:9:6.02:93,6,0	1/1:15,5:20:18.05:253,18,0	1/1:5,23:30:63.21:968,63,0	1/1:11,21:32:48.16:747,48,0	1/1:8,17:26:16.55:712,17,0	1/1:7,17:24:42.14:653,42,0	1/1:7,16:23:42.14:653,42,0	1/1:3,16:19:13.49:665,13,0	1/1:11,20:32:57.15:811,57,0	0/1:8,11:19:9.39:303,0,9	1/1:2,2:4:6.02:93,6,0
chr10	27533781	.	CG	C	10316.13	PASS	AB=1.000;AC=53;AF=0.946;AN=56;BaseQRankSum=3.329;DP=426;FS=1.571;HRun=1;HaplotypeScore=289.7767;InbreedingCoeff=0.5317;MQ=65.13;MQ0=0;MQRankSum=-3.419;QD=25.53;ReadPosRankSum=4.092;VQSLOD=4.1886;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,12:12:27.07:285,27,0	1/1:0,10:10:30.07:316,30,0	1/1:14,0:14:16.78:279,17,0	0/1:11,0:11:23.43:192,0,23	1/1:3,14:17:37.90:378,38,0	1/1:2,15:17:39.09:407,39,0	1/1:0,12:12:33.06:331,33,0	1/1:4,21:25:53.41:457,53,0	1/1:0,7:7:20.67:184,21,0	1/1:0,26:26:73.95:633,74,0	1/1:0,15:15:45.10:459,45,0	1/1:1,14:15:41.12:399,41,0	1/1:0,17:17:48.11:498,48,0	1/1:1,8:9:20.94:195,21,0	0/0:22,0:22:5.77:0,6,33	1/1:0,14:14:39.09:404,39,0	1/1:0,12:12:33.08:341,33,0	1/1:0,7:7:20.98:205,21,0	1/1:0,18:18:46.80:364,47,0	1/1:1,14:15:39.09:400,39,0	1/1:0,10:10:29.56:287,30,0	1/1:0,8:8:24.05:240,24,0	1/1:2,13:15:36.01:355,36,0	1/1:0,18:18:51.59:528,52,0	1/1:1,24:25:71.92:705,72,0	1/1:1,14:15:38.94:370,39,0	1/1:1,30:31:89.22:896,89,0	1/1:0,8:8:23.59:209,24,0
chr10	27535855	.	C	CAAG	442.30	PASS	AB=0.545;AC=21;AF=0.808;AN=26;BaseQRankSum=0.853;DP=32;FS=0.000;HRun=0;HaplotypeScore=89.5062;InbreedingCoeff=0.1452;MQ=82.21;MQ0=0;MQRankSum=-2.061;QD=17.01;ReadPosRankSum=1.777;VQSLOD=3.1744;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	1/1:0,0:1:3:27,3,0	./.	0/0:3,0:2:1.77:0,2,4	0/1:1,5:6:13.12:42,0,13	1/1:0,1:1:3.01:36,3,0	0/0:3,0:3:2.74:0,3,12	./.	./.	1/1:2,0:2:2.97:21,3,0	1/1:0,2:2:6.02:66,6,0	./.	./.	./.	./.	./.	./.	./.	./.	1/1:0,1:2:5.14:23,5,0	./.	1/1:2,1:3:5.45:51,5,0	1/1:1,3:4:9:84,9,0	./.	1/1:0,2:2:6.02:69,6,0	1/1:0,1:1:3.01:38,3,0	./.	1/1:0,2:2:6.02:75,6,0
chr10	27536121	.	G	GT	13234.70	PASS	AB=0.909;AC=53;AF=0.946;AN=56;BaseQRankSum=-2.116;DP=462;FS=2.160;HRun=8;HaplotypeScore=84.0273;InbreedingCoeff=0.6810;MQ=71.64;MQ0=0;MQRankSum=-6.844;QD=29.54;ReadPosRankSum=3.179;VQSLOD=4.6268;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,13:13:39.12:449,39,0	1/1:2,2:4:6.02:69,6,0	0/0:14,0:14:26.19:0,26,239	0/1:9,0:10:3.06:3,0,118	1/1:0,18:18:51.08:571,51,0	1/1:1,18:19:54.12:608,54,0	1/1:1,8:9:24.07:277,24,0	1/1:8,23:31:69.20:792,69,0	1/1:2,8:10:27.08:309,27,0	1/1:2,18:20:54.16:623,54,0	1/1:0,17:17:51.11:574,51,0	1/1:1,16:17:42.12:484,42,0	1/1:6,15:21:42.12:485,42,0	1/1:2,24:26:72.21:831,72,0	1/1:1,17:18:48.14:554,48,0	1/1:1,16:17:42.12:485,42,0	1/1:0,20:20:54.16:621,54,0	1/1:0,6:6:18.05:208,18,0	1/1:6,9:15:5.63:318,6,0	1/1:2,25:27:72.13:801,72,0	1/1:0,13:13:36.11:415,36,0	1/1:1,20:21:54.16:623,54,0	1/1:2,24:26:75.20:852,75,0	1/1:0,11:11:30.09:346,30,0	1/1:1,11:12:33.10:381,33,0	1/1:0,16:16:45.13:519,45,0	1/1:0,25:25:72.21:831,72,0	1/1:0,6:6:18.05:208,18,0
chr10	27538154	.	GA	G	11056.59	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=2.156;DP=461;FS=12.231;HRun=7;HaplotypeScore=51.1382;InbreedingCoeff=0.9743;MQ=70.30;MQ0=0;MQRankSum=-5.352;QD=26.45;ReadPosRankSum=1.874;VQSLOD=4.7377;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,22:24:57.13:581,57,0	1/1:1,9:10:24.05:245,24,0	0/0:14,0:12:23.94:0,24,271	0/0:16,0:11:22.05:0,22,271	1/1:4,18:22:54.12:549,54,0	1/1:0,13:13:36.08:367,36,0	1/1:2,4:6:12.03:122,12,0	1/1:2,24:26:72.15:727,72,0	1/1:2,15:17:40.10:425,40,0	1/1:2,16:18:51.11:520,51,0	1/1:5,26:31:75.16:764,75,0	1/1:1,17:18:42.10:429,42,0	1/1:1,23:24:60.14:612,60,0	1/1:3,14:17:39.09:398,39,0	0/0:13,0:13:39.11:0,39,477	1/1:2,8:10:24.05:245,24,0	1/1:1,24:25:69.15:704,69,0	1/1:1,6:7:18.04:184,18,0	1/1:1,7:8:21.04:213,21,0	1/1:1,16:17:48.11:487,48,0	1/1:1,7:8:20.88:198,21,0	1/1:0,13:13:39.09:396,39,0	1/1:0,23:23:59.91:612,60,0	1/1:0,5:5:15.03:153,15,0	1/1:0,12:12:33.07:337,33,0	1/1:0,19:19:57.13:582,57,0	1/1:2,28:30:75.04:749,75,0	1/1:0,15:15:45.10:459,45,0
chr10	27538695	.	T	TA	7889.32	PASS	AB=0.597;AC=42;AF=0.778;AN=54;BaseQRankSum=-8.385;DP=614;FS=4.831;HRun=12;HaplotypeScore=70.7712;InbreedingCoeff=0.3264;MQ=70.89;MQ0=6;MQRankSum=-2.018;QD=14.37;ReadPosRankSum=1.651;VQSLOD=5.6372;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,19:38:16.15:651,16,0	1/1:1,4:5:9.01:87,9,0	0/0:14,0:14:9.92:0,10,102	0/0:17,0:16:11.55:0,12,129	1/1:9,19:28:13.12:418,13,0	1/1:5,27:32:9.51:576,10,0	1/1:4,17:21:5.46:353,5,0	1/1:6,12:18:2.71:182,3,0	1/1:5,11:16:18.91:177,19,0	1/1:13,13:26:30.04:286,30,0	1/1:8,15:23:24.92:235,25,0	0/1:5,16:21:1.75:308,0,2	1/1:3,22:25:39.06:380,39,0	0/1:8,14:22:13.65:199,0,14	0/0:31,0:31:61.66:0,62,456	1/1:3,22:25:48.55:468,49,0	1/1:2,21:23:45.06:433,45,0	1/1:2,13:15:24.04:233,24,0	0/1:8,13:22:17.76:299,0,18	0/1:9,23:31:8.76:380,0,9	1/1:6,8:15:26.88:248,27,0	0/1:8,16:25:23.01:254,0,23	1/1:4,14:18:24.51:235,25,0	1/1:3,26:29:69.11:671,69,0	1/1:6,16:22:17.15:328,17,0	1/1:6,10:15:24:220,24,0	0/1:10,17:27:5.78:266,0,6	./.
chr10	27539351	.	AAC	A	179.15	PASS	AB=0.938;AC=15;AF=0.288;AN=52;BaseQRankSum=5.348;DP=596;FS=3.842;HRun=0;HaplotypeScore=85.7545;InbreedingCoeff=-0.1148;MQ=64.41;MQ0=13;MQRankSum=-0.419;QD=0.69;ReadPosRankSum=1.404;VQSLOD=1.5260;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:35.99:0,36,413	0/0:9,0:9:6.01:0,6,69	./.	./.	0/1:19,1:21:16.56:17,0,323	0/0:18,0:18:33.08:0,33,442	0/1:24,3:26:44.03:44,0,129	0/0:34,0:31:8.99:0,9,109	0/0:10,0:10:23.73:0,24,275	0/0:21,1:21:0.56:0,1,324	0/1:17,0:19:22.57:23,0,224	0/0:13,0:13:17.39:0,17,266	0/0:15,0:15:16.16:0,16,168	0/1:14,3:16:23.02:23,0,81	1/1:10,0:22:20.36:99,20,0	0/0:28,0:28:30.08:0,30,424	0/1:30,2:31:37.92:38,0,524	0/1:13,1:14:14.58:26,0,15	1/1:8,0:8:2.49:9,2,0	0/1:19,1:22:8.41:8,0,208	0/0:28,0:28:6.63:0,7,381	0/0:26,0:28:6.84:0,7,423	0/0:16,0:16:12.03:0,12,155	0/1:29,0:29:4.63:5,0,285	0/0:31,0:30:9.51:0,10,504	0/1:15,0:14:17.71:18,0,92	0/1:20,0:20:10.61:11,0,180	0/1:10,1:11:8.45:8,0,267
chr10	27539652	.	A	AT	20048.45	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-9.909;DP=615;FS=1.190;HRun=3;HaplotypeScore=53.1242;InbreedingCoeff=0.9384;MQ=78.26;MQ0=0;MQRankSum=-3.456;QD=35.93;ReadPosRankSum=2.603;VQSLOD=5.3814;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,14:16:42.14:588,42,0	1/1:0,10:10:30.10:420,30,0	0/0:16,0:16:39.11:0,39,459	0/0:10,0:10:15.05:0,15,180	1/1:1,27:28:78.04:995,78,0	1/1:1,29:30:72.24:1008,72,0	1/1:1,15:16:42.14:588,42,0	1/1:3,25:28:75.21:1000,75,0	1/1:1,25:26:72.24:1008,72,0	1/1:1,27:28:81.25:1115,81,0	1/1:1,18:19:54.18:756,54,0	1/1:0,26:26:69.23:966,69,0	1/1:0,30:30:84.22:1174,84,0	1/1:3,20:23:57.18:780,57,0	0/0:31,0:31:87.23:0,87,1013	1/1:0,26:26:69.23:966,69,0	1/1:1,20:21:51.17:714,51,0	1/1:0,4:4:6.02:84,6,0	1/1:2,12:14:36.10:470,36,0	1/1:0,22:22:66.09:858,66,0	1/1:1,13:14:36.12:504,36,0	1/1:1,21:22:60.03:771,60,0	1/1:2,34:36:87.29:1218,87,0	1/1:0,25:25:63.21:882,63,0	1/1:2,18:20:39.13:546,39,0	1/1:2,35:37:99:1390,102,0	1/1:3,31:34:81.27:1123,81,0	1/1:0,3:3:9.03:126,9,0
chr10	27540182	.	A	ATTT	971.57	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=5.175;DP=629;FS=2.809;HRun=3;HaplotypeScore=136.6807;InbreedingCoeff=0.6454;MQ=75.23;MQ0=0;MQRankSum=-1.052;QD=27.76;ReadPosRankSum=-1.306;VQSLOD=0.7622;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:89.90:0,90,1012	0/0:7,0:7:21.06:0,21,240	0/0:17,0:17:37.37:0,37,569	0/1:13,0:11:24.80:25,0,204	0/0:28,0:28:78.20:0,78,938	0/0:46,0:46:99:0,129,1568	0/0:20,0:20:48.12:0,48,562	0/0:29,0:30:78.24:0,78,1017	0/0:10,0:10:24.07:0,24,309	0/0:23,0:23:57.08:0,57,806	0/0:24,0:24:51.17:0,51,684	0/0:17,0:17:45.14:0,45,562	0/0:15,0:15:35.90:0,36,422	0/0:24,0:24:65.22:0,65,767	1/1:1,19:22:51.18:1053,51,0	0/0:24,0:24:56.19:0,56,726	0/0:18,0:18:54.15:0,54,600	0/0:11,0:11:33.09:0,33,357	0/0:13,0:13:39.12:0,39,510	0/0:38,0:38:99:0,105,1325	0/0:16,0:16:39.10:0,39,459	0/0:22,0:22:51.38:0,51,710	0/0:41,0:41:99:0,111,1305	0/0:19,0:19:41.91:0,42,483	0/0:17,0:17:42.12:0,42,497	0/0:30,0:30:73.73:0,74,980	0/0:35,0:35:93.26:0,93,1090	0/0:15,0:15:41.94:0,42,461
chr10	27540185	.	T	TA	13344.08	PASS	AB=0.744;AC=50;AF=0.893;AN=56;BaseQRankSum=-8.935;DP=648;FS=0.625;HRun=10;HaplotypeScore=71.4103;InbreedingCoeff=0.6479;MQ=74.42;MQ0=0;MQRankSum=-2.328;QD=21.80;ReadPosRankSum=1.914;VQSLOD=5.7610;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,27:34:78.01:800,78,0	1/1:0,8:8:21.05:224,21,0	0/0:14,0:15:21.76:0,22,187	0/1:13,0:12:16.60:17,0,80	1/1:5,25:31:44.21:622,44,0	1/1:9,36:45:80.62:1063,81,0	0/1:4,16:20:4.23:358,0,4	1/1:11,18:30:48.43:495,48,0	1/1:3,8:11:15.04:160,15,0	1/1:3,21:24:54:558,54,0	1/1:1,24:25:61.34:629,61,0	1/1:3,14:17:36.09:384,36,0	1/1:1,15:16:32.87:352,33,0	1/1:5,20:25:51.13:544,51,0	0/0:21,0:21:36.20:0,36,140	1/1:5,20:25:35.42:525,35,0	1/1:2,18:20:54.14:576,54,0	1/1:1,11:12:36.05:371,36,0	1/1:6,10:16:10.44:290,10,0	1/1:11,26:38:59.22:770,59,0	1/1:5,13:18:30.07:316,30,0	1/1:4,19:23:54.14:575,54,0	1/1:10,33:43:65.57:902,66,0	1/1:1,18:19:17.22:391,17,0	1/1:3,16:19:39.10:416,39,0	1/1:5,25:30:72.18:767,72,0	1/1:6,28:34:75.26:856,75,0	1/1:2,13:15:36.09:384,36,0
chr10	27540946	.	G	GTT	3840.80	PASS	AB=0.578;AC=51;AF=0.911;AN=56;BaseQRankSum=0.739;DP=558;FS=0.731;HRun=9;HaplotypeScore=99.2059;InbreedingCoeff=0.7576;MQ=78.72;MQ0=2;MQRankSum=-6.282;QD=7.25;ReadPosRankSum=3.525;VQSLOD=-0.0968;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,1:20:14.43:159,14,0	1/1:0,0:7:17.47:60,17,0	0/0:17,0:17:39.04:0,39,398	0/0:11,0:11:13.96:0,14,185	0/1:7,1:25:11.51:136,0,12	1/1:5,0:31:30.98:174,31,0	1/1:6,0:20:29.94:103,30,0	1/1:6,0:25:43.57:153,44,0	1/1:3,0:19:39.80:136,40,0	1/1:6,0:21:34.16:115,34,0	1/1:4,0:33:56.12:222,56,0	1/1:2,0:13:24.95:86,25,0	1/1:1,0:15:27.45:94,27,0	1/1:0,0:18:39.80:137,40,0	1/1:3,1:20:45.03:416,45,0	1/1:1,0:10:19.96:68,20,0	1/1:1,0:17:37.31:128,37,0	1/1:6,0:22:35.73:141,36,0	1/1:3,0:20:38.99:154,39,0	1/1:5,0:34:65.76:242,66,0	1/1:2,0:13:22.76:82,23,0	1/1:5,0:23:37.43:130,37,0	1/1:2,0:24:23.25:148,23,0	1/1:4,2:22:39.89:207,40,0	1/1:2,0:14:24.95:86,25,0	1/1:5,0:27:55.27:202,55,0	1/1:3,1:29:33.98:220,34,0	1/1:0,0:5:12.48:43,12,0
chr10	27541282	.	A	AAAAG	1718.56	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.762;DP=609;FS=10.423;HRun=0;HaplotypeScore=101.6621;InbreedingCoeff=0.9941;MQ=77.91;MQ0=0;MQRankSum=-7.681;QD=52.08;ReadPosRankSum=-0.847;VQSLOD=4.3118;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:57.17:0,57,980	0/0:14,0:14:42.14:0,42,775	0/0:20,0:20:50.22:0,50,811	0/0:10,0:10:29.61:0,30,411	0/0:28,0:28:84.26:0,84,1446	0/0:25,0:25:72.19:0,72,1146	0/0:19,0:19:51.17:0,51,912	0/0:36,0:36:90.27:0,90,1520	0/0:16,0:16:42.14:0,42,738	0/0:25,0:25:75.26:0,75,1382	0/0:24,0:24:69.21:0,69,1199	0/0:19,0:19:54.17:0,54,934	0/0:24,0:24:63.22:0,63,1155	0/0:31,0:31:84.22:0,84,1418	1/1:6,24:33:72.24:1813,72,0	0/0:20,0:20:60.20:0,60,1066	0/0:9,0:9:27.08:0,27,467	0/0:13,0:13:35.93:0,36,586	0/0:21,0:21:60.19:0,60,1045	0/0:38,0:38:99:0,102,1816	0/0:21,0:21:63.21:0,63,1131	0/0:22,0:22:60.21:0,60,1089	0/0:26,0:26:78.25:0,78,1375	0/0:12,0:12:36.12:0,36,662	0/0:19,0:19:54.16:0,54,912	0/0:22,0:22:63.21:0,63,1135	0/0:35,0:34:96.33:0,96,1770	0/0:7,0:7:21.05:0,21,356
chr10	27542200	.	C	CAACAAACAAACA	3710.40	PASS	AB=1.000;AC=4;AF=0.071;AN=56;BaseQRankSum=-2.176;DP=822;FS=20.411;HRun=0;HaplotypeScore=268.3939;InbreedingCoeff=0.4434;MQ=68.15;MQ0=2;MQRankSum=-8.024;QD=43.65;ReadPosRankSum=-3.565;VQSLOD=1.7050;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:9.96:0,10,977	0/0:14,0:14:27.08:0,27,769	0/0:35,0:28:21:0,21,314	0/0:30,0:30:17.24:0,17,606	0/0:33,0:33:69.21:0,69,2162	0/0:36,0:36:81.26:0,81,2476	0/1:19,0:19:50.93:51,0,1307	0/0:33,0:34:30.10:0,30,813	0/0:35,0:35:78.24:0,78,2484	0/0:33,0:33:54.18:0,54,1719	0/0:26,0:26:51.16:0,51,1580	0/0:30,0:30:63.19:0,63,1863	0/0:35,0:35:78.25:0,78,2563	0/0:38,0:40:93.32:0,93,3015	1/1:23,20:45:66.23:3628,66,0	0/0:43,0:43:90.27:0,90,2749	0/1:21,0:21:31.73:32,0,1330	0/0:11,0:11:21.07:0,21,727	0/0:28,0:28:40.98:0,41,1299	0/0:32,0:32:77.45:0,77,2355	0/0:32,0:32:66.15:0,66,1933	0/0:33,0:33:69.22:0,69,2305	0/0:24,0:26:60.21:0,60,1956	0/0:35,0:35:69.18:0,69,2177	0/0:23,0:23:54.13:0,54,1481	0/0:26,0:27:57.15:0,57,1641	0/0:25,0:25:54.18:0,54,1861	0/0:18,0:18:42.11:0,42,1352
chr10	27543197	.	G	GAA	202.02	PASS	AB=1.000;AC=4;AF=0.071;AN=56;BaseQRankSum=5.648;DP=534;FS=5.960;HRun=1;HaplotypeScore=88.9230;InbreedingCoeff=0.4841;MQ=55.58;MQ0=5;MQRankSum=-0.340;QD=4.81;ReadPosRankSum=4.430;VQSLOD=-0.5309;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:24.40:0,24,213	0/0:13,0:13:31.52:0,32,254	0/0:20,0:9:15:0,15,140	0/0:31,0:13:13.92:0,14,208	0/0:18,0:18:31.14:0,31,241	0/0:36,0:36:46.02:0,46,443	0/0:22,0:22:41.80:0,42,332	0/0:21,0:21:59.65:0,60,491	0/0:22,0:22:13.76:0,14,151	0/0:19,0:19:37.64:0,38,376	0/0:17,0:17:29.95:0,30,233	0/0:21,0:21:18.85:0,19,213	0/0:18,0:18:31.21:0,31,224	0/0:11,0:11:13.13:0,13,107	1/1:2,16:18:15.05:289,15,0	0/0:12,0:12:23.92:0,24,193	0/0:30,0:29:53.04:0,53,457	0/0:13,0:13:15.31:0,15,177	0/0:14,0:14:37.79:0,38,296	0/0:23,0:23:38.82:0,39,391	0/1:17,0:17:9.89:10,0,75	0/0:14,0:14:20.95:0,21,178	0/0:23,0:23:27.87:0,28,245	0/0:16,0:16:12.26:0,12,100	0/0:17,0:17:22.41:0,22,163	0/1:7,0:7:0.85:1,0,111	0/0:21,0:20:40.59:0,41,314	0/0:11,0:11:14.63:0,15,116
chr10	27543760	.	A	AAATG	25466.17	PASS	AB=1.000;AC=53;AF=0.946;AN=56;BaseQRankSum=-3.820;DP=729;FS=31.906;HRun=0;HaplotypeScore=101.5913;InbreedingCoeff=0.6986;MQ=71.73;MQ0=1;MQRankSum=-3.966;QD=35.92;ReadPosRankSum=3.604;VQSLOD=3.0524;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,34:47:69.23:1649,69,0	1/1:5,9:14:21.07:464,21,0	0/1:27,0:24:5.07:5,0,209	0/0:20,0:19:12.04:0,12,188	1/1:4,20:27:60.19:1258,60,0	1/1:3,14:20:33.11:789,33,0	1/1:7,6:14:15.05:359,15,0	1/1:21,11:36:48.10:903,48,0	1/1:11,14:25:39.13:932,39,0	1/1:12,25:38:81.23:1740,81,0	1/1:3,19:23:57.19:1276,57,0	1/1:3,17:20:30.10:717,30,0	1/1:13,13:27:44.82:1054,45,0	1/1:7,23:30:51.18:1219,51,0	1/1:2,0:27:29.99:579,30,0	1/1:7,27:34:57.20:1363,57,0	1/1:5,17:24:48.16:1133,48,0	1/1:5,9:14:21.07:482,21,0	1/1:7,6:14:24.08:468,24,0	1/1:11,16:28:45.15:975,45,0	1/1:12,16:30:39.13:932,39,0	1/1:8,25:34:69.23:1564,69,0	1/1:5,18:26:45.62:1038,46,0	1/1:9,20:30:42.14:1004,42,0	1/1:6,16:25:45.15:1063,45,0	1/1:10,20:30:63.22:1425,63,0	1/1:19,15:34:32.97:788,33,0	1/1:2,7:8:12.04:287,12,0
chr10	27544678	.	AT	A	8382.82	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=3.225;DP=341;FS=0.000;HRun=6;HaplotypeScore=58.4273;InbreedingCoeff=0.7905;MQ=70.75;MQ0=0;MQRankSum=-1.426;QD=26.44;ReadPosRankSum=0.052;VQSLOD=4.8599;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,4:4:9.02:97,9,0	1/1:1,7:8:18.05:193,18,0	0/0:6,0:6:12.03:0,12,146	0/0:6,0:6:2.23:0,2,28	1/1:2,19:21:45.11:483,45,0	1/1:0,13:13:36.09:387,36,0	1/1:0,5:5:12.03:129,12,0	1/1:3,31:34:93.21:989,93,0	1/1:0,6:6:15.04:161,15,0	1/1:2,21:23:57.13:605,57,0	1/1:1,19:20:42.10:451,42,0	1/1:1,6:7:18.04:193,18,0	1/1:4,9:13:24.05:252,24,0	1/1:0,7:7:18.05:193,18,0	0/0:12,0:12:36.11:0,36,460	1/1:2,7:9:18.04:193,18,0	1/1:2,15:17:16.07:422,16,0	1/1:1,21:22:57.13:606,57,0	1/1:2,19:21:59.36:619,59,0	1/1:1,10:11:30.07:322,30,0	1/1:1,2:3:6.02:64,6,0	1/1:2,3:5:9.02:97,9,0	1/1:1,6:7:18.05:193,18,0	1/1:0,3:3:9.02:97,9,0	1/1:0,18:18:48.12:516,48,0	1/1:0,10:10:30.08:322,30,0	1/1:3,19:22:54.11:570,54,0	1/1:0,8:8:21.05:226,21,0
chr10	27545907	.	A	ACC	6386.43	PASS	AC=50;AF=0.926;AN=54;BaseQRankSum=4.851;DP=365;FS=2.717;HRun=1;HaplotypeScore=69.8834;InbreedingCoeff=0.7619;MQ=45.81;MQ0=2;MQRankSum=-3.747;QD=19.96;ReadPosRankSum=1.734;VQSLOD=2.8647;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,9:13:18.06:239,18,0	1/1:1,3:4:5.99:59,6,0	0/0:15,0:11:21.11:0,21,448	0/0:24,0:19:50.18:0,50,647	1/1:5,19:24:34.43:355,34,0	1/1:0,19:17:30.09:381,30,0	1/1:1,5:6:15.03:168,15,0	1/1:2,13:10:30.10:400,30,0	1/1:1,8:8:15.05:205,15,0	1/1:3,12:14:30.10:405,30,0	1/1:3,18:21:33.08:383,33,0	1/1:1,12:11:12.04:154,12,0	1/1:0,11:11:18.06:255,18,0	1/1:1,11:11:17.83:204,18,0	1/1:3,10:12:8.99:93,9,0	1/1:0,16:16:18.06:241,18,0	1/1:5,10:14:29.75:355,30,0	./.	1/1:3,7:9:24.03:289,24,0	1/1:3,20:22:42.08:563,42,0	1/1:0,1:1:3.01:35,3,0	1/1:0,10:8:12.04:160,12,0	1/1:1,11:12:9.03:103,9,0	1/1:2,8:10:11.73:106,12,0	1/1:2,15:17:24.03:299,24,0	1/1:0,9:9:27.09:392,27,0	1/1:2,10:11:23.99:275,24,0	1/1:2,8:10:21.05:269,21,0
chr10	27545909	.	TA	T	3481.41	PASS	AC=50;AF=0.926;AN=54;BaseQRankSum=5.978;DP=340;FS=0.000;HRun=1;HaplotypeScore=68.7743;InbreedingCoeff=0.6883;MQ=46.16;MQ0=3;MQRankSum=-4.394;QD=11.88;ReadPosRankSum=3.164;VQSLOD=2.0372;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,9:12:17.87:138,18,0	1/1:0,3:3:2.98:22,3,0	0/0:16,0:11:33.11:0,33,526	0/0:26,0:19:54.17:0,54,801	1/1:1,20:21:28.67:195,29,0	1/1:0,19:17:29.79:221,30,0	1/1:0,5:5:11.84:81,12,0	1/1:0,14:10:29.86:238,30,0	1/1:0,8:7:14.91:115,15,0	1/1:1,12:12:29.92:247,30,0	1/1:0,18:18:29.40:196,29,0	1/1:1,12:11:11.94:90,12,0	1/1:0,11:11:17.95:159,18,0	1/1:1,11:11:14.44:104,14,0	1/1:1,10:10:5.95:42,6,0	1/1:0,16:16:17.92:145,18,0	1/1:1,10:10:17.84:126,18,0	./.	1/1:0,7:6:14.02:104,14,0	1/1:1,21:21:40.53:336,41,0	1/1:0,1:1:2.96:19,3,0	1/1:0,10:8:11.93:97,12,0	1/1:1,11:12:8.81:55,9,0	1/1:1,8:9:6.42:43,6,0	1/1:1,15:16:20.86:156,21,0	1/1:0,9:9:27:246,27,0	1/1:0,10:9:17.91:140,18,0	1/1:1,9:10:20.89:167,21,0
chr10	27545976	.	A	AC	7232.50	PASS	AC=50;AF=0.926;AN=54;BaseQRankSum=-1.373;DP=444;FS=0.000;HRun=0;HaplotypeScore=30.8037;InbreedingCoeff=0.6305;MQ=36.83;MQ0=13;MQRankSum=-6.160;QD=19.18;ReadPosRankSum=2.776;VQSLOD=6.0946;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,7:7:6.02:95,6,0	1/1:2,7:9:9.03:143,9,0	0/0:29,0:20:57.19:0,57,789	0/0:35,0:15:23.05:0,23,522	1/1:0,22:22:23.97:333,24,0	1/1:0,21:18:24.01:337,24,0	1/1:0,2:2:3.01:48,3,0	1/1:4,17:10:30.05:448,30,0	1/1:1,13:12:6.02:95,6,0	1/1:1,20:18:42.14:646,42,0	1/1:0,17:16:9.03:142,9,0	1/1:0,20:17:12.04:190,12,0	1/1:0,8:6:6.02:95,6,0	1/1:0,12:11:9.03:143,9,0	1/1:0,20:19:9.03:143,9,0	1/1:0,21:19:21.07:321,21,0	1/1:0,11:11:18.06:285,18,0	1/1:1,7:8:6.02:95,6,0	1/1:0,8:6:15.03:215,15,0	1/1:0,24:24:36.12:556,36,0	./.	1/1:0,10:10:15.05:223,15,0	1/1:0,17:17:24.08:379,24,0	1/1:0,10:8:6.02:95,6,0	1/1:0,18:18:21.07:333,21,0	1/1:2,24:26:66.18:1011,66,0	1/1:0,19:17:33.11:524,33,0	1/1:0,11:11:21.07:334,21,0
chr10	27546791	.	AT	A	18190.18	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=2.854;DP=598;FS=11.990;HRun=4;HaplotypeScore=65.8968;InbreedingCoeff=0.9924;MQ=81.27;MQ0=0;MQRankSum=-6.153;QD=33.56;ReadPosRankSum=3.918;VQSLOD=4.7218;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,22:23:63.19:756,63,0	1/1:1,9:10:24.07:288,24,0	0/0:14,0:14:42.14:0,42,568	0/0:17,0:17:29.91:0,30,553	1/1:0,34:34:96.29:1152,96,0	1/1:0,13:13:33.10:396,33,0	1/1:0,9:9:27.08:324,27,0	1/1:1,32:33:96.26:1128,96,0	1/1:0,26:26:75.23:900,75,0	1/1:0,35:35:99:1250,105,0	1/1:1,25:26:72.22:864,72,0	1/1:1,21:22:60.18:720,60,0	1/1:1,13:14:39.12:468,39,0	1/1:0,22:22:63.19:756,63,0	0/0:25,0:25:75.24:0,75,1021	1/1:0,20:20:60.18:720,60,0	1/1:0,17:17:51.16:612,51,0	1/1:0,16:16:45.14:538,45,0	1/1:2,16:18:48.13:565,48,0	1/1:0,43:43:99:1476,123,0	1/1:0,7:7:18.06:216,18,0	1/1:0,6:6:18.06:216,18,0	1/1:3,30:33:84.26:1008,84,0	1/1:0,9:9:27.08:324,27,0	1/1:2,32:34:87.27:1044,87,0	1/1:2,22:24:66.18:778,66,0	1/1:0,36:36:99:1296,108,0	1/1:0,12:12:33.09:396,33,0
chr10	27548230	.	AT	A	9802.50	PASS	AB=1.000;AC=51;AF=0.911;AN=56;BaseQRankSum=2.399;DP=425;FS=3.003;HRun=8;HaplotypeScore=52.8705;InbreedingCoeff=0.8264;MQ=69.58;MQ0=0;MQRankSum=-1.525;QD=24.57;ReadPosRankSum=0.344;VQSLOD=5.4742;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,10:10:27.04:261,27,0	1/1:0,4:4:9.01:87,9,0	0/0:8,0:7:7.58:0,8,120	0/1:8,0:5:0.35:0,0,25	1/1:3,23:26:66.10:637,66,0	1/1:1,16:17:42.07:406,42,0	1/1:3,4:7:12.02:116,12,0	1/1:3,23:26:69.03:646,69,0	1/1:0,9:9:24.04:232,24,0	1/1:1,16:17:48.06:458,48,0	1/1:0,23:23:63.05:598,63,0	1/1:0,13:13:39.06:377,39,0	1/1:1,14:15:39.06:374,39,0	1/1:2,12:14:30.05:290,30,0	0/0:18,0:18:48.15:0,48,580	1/1:0,21:21:57.09:550,57,0	1/1:3,13:16:33.05:318,33,0	1/1:0,17:17:48.08:463,48,0	1/1:3,11:14:33.05:318,33,0	1/1:1,13:14:36.05:348,36,0	1/1:0,15:15:42.07:406,42,0	1/1:1,9:10:27.04:261,27,0	1/1:0,17:17:48.08:463,48,0	1/1:1,7:8:21.03:203,21,0	1/1:0,21:21:60.10:579,60,0	1/1:0,23:23:69.08:658,69,0	1/1:3,22:24:57.09:550,57,0	1/1:1,8:9:21.03:203,21,0
chr10	27549806	.	AT	A	6121.74	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=1.601;DP=298;FS=4.783;HRun=9;HaplotypeScore=84.1521;InbreedingCoeff=0.5471;MQ=51.87;MQ0=5;MQRankSum=-0.803;QD=20.89;ReadPosRankSum=2.126;VQSLOD=5.6877;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,14:18:7.45:322,7,0	1/1:0,6:6:18.01:165,18,0	0/0:3,0:2:0:0,0,0	0/0:2,0:1:3.01:0,3,30	1/1:2,10:12:26.96:238,27,0	1/1:0,9:9:27.01:247,27,0	1/1:1,7:8:18:165,18,0	1/1:2,12:14:36.90:330,37,0	1/1:1,4:5:12.01:110,12,0	1/1:4,9:13:27.90:249,28,0	1/1:1,9:10:20.90:180,21,0	1/1:3,5:7:15.01:137,15,0	1/1:0,7:7:18:165,18,0	1/1:2,14:16:39.02:357,39,0	1/1:1,0:18:34.63:102,35,0	1/1:1,7:8:21.01:192,21,0	1/1:2,12:13:36.02:329,36,0	1/1:3,9:10:27.01:247,27,0	1/1:1,3:4:6:55,6,0	1/1:3,22:25:66.03:602,66,0	1/1:2,2:4:6:55,6,0	1/1:0,13:13:36.02:329,36,0	1/1:0,6:6:15:137,15,0	1/1:1,11:12:32.88:289,33,0	1/1:2,14:16:42.49:383,42,0	1/1:3,8:11:24.01:218,24,0	1/1:0,16:16:45.02:410,45,0	1/1:2,5:6:12.01:110,12,0
chr10	27549928	.	TC	T	2099.48	PASS	AC=46;AF=0.958;AN=48;BaseQRankSum=0.987;DP=148;FS=2.552;HRun=7;HaplotypeScore=24.8500;InbreedingCoeff=0.1504;MQ=32.88;MQ0=19;MQRankSum=0.961;QD=17.35;ReadPosRankSum=0.882;VQSLOD=2.4292;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,2:3:9.02:91,9,0	./.	./.	0/0:11,0:5:1.51:0,2,77	1/1:0,7:7:18.03:180,18,0	./.	1/1:3,3:6:12.02:122,12,0	1/1:1,4:4:12.03:122,12,0	1/1:2,5:6:9.02:92,9,0	1/1:3,1:4:6.01:59,6,0	1/1:2,3:5:6.01:61,6,0	1/1:0,5:5:12.02:122,12,0	1/1:1,6:7:15.03:153,15,0	1/1:2,5:6:9.02:92,9,0	1/1:0,5:5:15.03:153,15,0	1/1:1,6:7:18.03:182,18,0	1/1:2,2:1:3.01:31,3,0	1/1:0,2:2:3.01:31,3,0	1/1:4,2:5:3:31,3,0	1/1:1,1:2:3.01:31,3,0	./.	1/1:1,5:6:9.01:91,9,0	1/1:1,6:7:18:172,18,0	1/1:2,2:2:6.01:61,6,0	1/1:4,1:5:5.60:40,6,0	1/1:0,5:5:15.03:153,15,0	1/1:1,6:6:9.02:92,9,0	1/1:0,1:1:3.01:31,3,0
chr10	27549935	.	CA	C	746.60	PASS	AB=0.957;AC=36;AF=0.750;AN=48;BaseQRankSum=4.870;DP=154;FS=0.000;HRun=1;HaplotypeScore=26.2135;InbreedingCoeff=-0.0835;MQ=32.57;MQ0=21;MQRankSum=1.145;QD=5.97;ReadPosRankSum=4.364;VQSLOD=0.5721;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:9,1:5:6.38:44,0,6	./.	./.	0/0:11,0:5:6.18:0,6,101	1/1:8,0:8:16.80:77,17,0	./.	1/1:4,1:5:11.40:66,11,0	0/1:7,0:6:23.35:25,0,23	1/1:6,0:5:8.56:45,9,0	0/1:5,1:6:30.99:31,0,46	1/1:3,0:3:5.79:36,6,0	1/1:5,0:5:11.22:52,11,0	0/1:7,0:7:0.88:49,0,1	1/1:6,0:5:8.55:44,9,0	1/1:5,0:5:14.08:65,14,0	1/1:6,0:6:16.93:81,17,0	0/1:5,0:2:7.86:8,0,12	1/1:2,0:2:2.68:11,3,0	0/1:6,0:4:4.98:5,0,14	1/1:3,0:3:2.80:13,3,0	./.	0/1:6,0:6:6.55:28,0,7	1/1:6,0:6:15.38:70,15,0	0/1:5,0:3:8.34:18,0,8	0/1:3,1:4:9.34:18,0,9	1/1:5,0:5:13.59:57,14,0	0/1:7,0:6:6.72:25,0,7	1/1:2,0:1:2.74:12,3,0
chr10	27551458	.	GGC	G	1605.36	PASS	AB=0.852;AC=25;AF=0.446;AN=56;BaseQRankSum=5.788;DP=439;FS=19.838;HRun=0;HaplotypeScore=120.8900;InbreedingCoeff=-0.6144;MQ=51.06;MQ0=21;MQRankSum=-4.203;QD=4.52;ReadPosRankSum=0.330;VQSLOD=1.6697;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:7,1:7:3.69:0,4,95	0/0:5,2:6:12.04:0,12,182	0/0:45,1:11:13.74:0,14,194	0/1:68,2:21:48.50:48,0,233	0/1:15,2:17:99:106,0,274	0/1:15,4:17:46.90:47,0,276	0/1:7,2:6:17.73:18,0,45	0/1:21,12:28:99:257,0,731	0/1:15,3:16:99:145,0,170	0/1:9,3:10:99:137,0,307	0/1:9,9:18:33.84:34,0,92	0/1:11,1:12:86.31:86,0,252	0/1:9,3:10:99:131,0,218	0/1:13,2:14:22.28:22,0,281	0/0:15,0:15:39.13:0,39,719	0/1:10,3:11:90.65:91,0,290	0/1:2,1:3:19.22:19,0,41	1/1:2,2:4:4:82,4,0	0/1:5,1:6:46.34:46,0,152	0/1:10,1:10:99:106,0,117	0/1:7,0:7:31.38:31,0,48	0/0:4,3:6:5.31:0,5,49	1/1:3,3:6:1.02:40,1,0	0/1:9,0:9:58.90:59,0,94	0/1:19,3:21:79.11:79,0,483	0/1:16,0:15:54.22:54,0,374	0/1:7,6:13:84.73:85,0,245	0/1:7,2:9:36.40:36,0,246
chr10	27551484	.	C	CAG	238.05	PASS	AB=0.847;AC=3;AF=0.054;AN=56;BaseQRankSum=3.090;DP=585;FS=1.975;HRun=0;HaplotypeScore=135.3108;InbreedingCoeff=-0.0620;MQ=55.50;MQ0=35;MQRankSum=-3.828;QD=1.64;ReadPosRankSum=-2.117;VQSLOD=2.4332;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:11.79:0,12,127	0/0:5,0:4:12.04:0,12,143	0/0:81,0:20:12.48:0,12,209	0/1:111,0:28:7.44:7,0,66	0/0:19,0:19:5.23:0,5,396	0/0:25,0:22:23.95:0,24,268	0/0:8,0:7:11.83:0,12,141	0/0:46,0:41:10.74:0,11,404	0/0:15,0:12:11.05:0,11,141	0/0:20,0:18:36.08:0,36,492	0/0:16,0:16:14.67:0,15,171	0/0:10,0:11:23.64:0,24,261	0/0:15,0:13:18.58:0,19,337	0/0:13,0:14:20.87:0,21,250	0/1:5,11:15:14.70:266,0,15	0/0:15,0:13:35.46:0,35,390	0/0:8,0:7:12.04:0,12,143	0/0:3,0:4:5.85:0,6,50	0/1:17,1:14:57.94:59,0,58	0/0:20,0:19:38.37:0,38,402	0/0:13,0:12:18.05:0,18,214	0/0:7,0:6:8.69:0,9,107	0/0:8,0:8:9.03:0,9,107	0/0:9,0:9:14.77:0,15,178	0/0:23,0:21:41.64:0,42,435	0/0:17,0:17:35.94:0,36,407	0/0:12,0:13:25.48:0,25,297	0/0:11,0:11:24.63:0,25,276
chr10	27551733	.	CA	C	15454.44	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=6.031;DP=516;FS=1.256;HRun=3;HaplotypeScore=50.5864;InbreedingCoeff=0.9883;MQ=77.10;MQ0=0;MQRankSum=-2.728;QD=33.16;ReadPosRankSum=2.562;VQSLOD=5.1222;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,18:17:48.15:595,48,0	1/1:0,7:7:21.07:260,21,0	0/0:9,0:9:24.08:0,24,335	0/0:13,0:13:33.08:0,33,435	1/1:0,24:24:66.21:818,66,0	1/1:0,21:21:60.19:744,60,0	1/1:0,8:8:18.06:223,18,0	1/1:1,22:23:66.19:804,66,0	1/1:1,25:26:72.23:893,72,0	1/1:0,23:21:63.20:781,63,0	1/1:0,20:20:54.17:669,54,0	1/1:0,16:16:48.15:595,48,0	1/1:1,23:24:63.20:781,63,0	1/1:1,27:28:75.24:930,75,0	0/0:28,0:28:75.25:0,75,1064	1/1:0,18:18:54.17:670,54,0	1/1:0,14:14:39.12:483,39,0	1/1:0,8:8:24.08:297,24,0	1/1:2,13:15:39.12:484,39,0	1/1:1,29:30:78.24:966,78,0	1/1:2,11:13:33.10:409,33,0	1/1:0,21:21:51.16:632,51,0	1/1:0,13:13:36.11:446,36,0	1/1:1,20:21:51.16:632,51,0	1/1:0,15:15:36.11:446,36,0	1/1:0,17:17:51.16:632,51,0	1/1:1,34:35:87.27:1078,87,0	1/1:0,8:8:15.05:186,15,0
chr10	27554244	.	C	CTT	8059.78	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-3.445;DP=320;FS=10.587;HRun=10;HaplotypeScore=45.4074;InbreedingCoeff=0.7958;MQ=51.27;MQ0=5;MQRankSum=1.810;QD=27.70;ReadPosRankSum=-0.849;VQSLOD=3.1985;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,16:20:36.12:537,36,0	1/1:0,3:4:8.52:98,9,0	0/0:2,0:2:2.98:0,3,29	0/0:6,0:3:8.57:0,9,61	1/1:6,15:23:29.78:652,30,0	1/1:2,5:6:9.03:134,9,0	1/1:6,2:8:11.95:129,12,0	1/1:8,9:18:34.37:417,34,0	1/1:2,2:5:11.45:94,11,0	1/1:1,8:9:21.06:294,21,0	1/1:0,5:5:15.05:224,15,0	1/1:2,9:12:23.56:306,24,0	1/1:3,5:8:18.02:244,18,0	1/1:6,4:10:23.91:244,24,0	0/0:21,0:21:54.11:0,54,549	1/1:0,7:7:18.06:269,18,0	1/1:3,11:14:20.56:277,21,0	1/1:3,11:14:29.59:411,30,0	1/1:5,10:15:36.05:488,36,0	1/1:6,11:17:36.03:471,36,0	1/1:2,9:10:24.08:357,24,0	1/1:3,11:16:38.61:526,39,0	1/1:5,4:9:15.01:198,15,0	1/1:0,5:5:12.04:179,12,0	1/1:4,14:18:39.13:581,39,0	1/1:8,13:20:42.02:550,42,0	1/1:3,5:9:23.95:284,24,0	1/1:0,2:3:8.52:98,9,0
chr10	27554370	.	TC	T	493.56	PASS	AB=1.000;AC=21;AF=0.875;AN=24;BaseQRankSum=0.423;DP=60;FS=9.777;HRun=4;HaplotypeScore=24.2930;InbreedingCoeff=0.0881;MQ=67.91;MQ0=27;MQRankSum=-2.752;QD=14.52;ReadPosRankSum=2.329;VQSLOD=1.3628;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:2,0:2:3.89:0,4,32	0/1:3,0:2:5.66:6,0,12	./.	./.	1/1:0,1:1:3.01:36,3,0	1/1:3,1:2:3.01:36,3,0	1/1:0,1:1:3.01:36,3,0	./.	1/1:1,2:1:3.01:36,3,0	1/1:0,1:1:3.01:36,3,0	./.	1/1:1,1:2:3.01:36,3,0	1/1:5,7:8:21.06:252,21,0	1/1:1,2:2:3.01:36,3,0	./.	./.	1/1:2,1:1:3.01:36,3,0	./.	./.	./.	1/1:0,1:1:3.01:36,3,0	./.	./.	./.	./.	./.
chr10	27554379	.	TCC	T	345.50	PASS	AB=1.000;AC=14;AF=0.875;AN=16;BaseQRankSum=2.177;DP=68;FS=22.304;HRun=8;HaplotypeScore=29.0816;MQ=83.07;MQ0=33;MQRankSum=-0.372;QD=11.52;ReadPosRankSum=2.814;VQSLOD=-0.2927;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	1/1:0,1:1:3.01:37,3,0	0/1:5,0:4:26.39:26,0,67	0/1:6,0:4:2.98:31,0,3	./.	./.	./.	./.	1/1:0,1:1:3.01:37,3,0	./.	1/1:1,1:1:3.01:37,3,0	./.	./.	1/1:0,1:1:3.01:37,3,0	1/1:6,5:7:15.03:183,15,0	1/1:2,1:2:3.01:37,3,0	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.
chr10	27554398	.	T	TC	313.03	PASS	AC=12;AF=0.750;AN=16;BaseQRankSum=3.172;DP=71;FS=20.840;HRun=4;HaplotypeScore=41.7976;MQ=80.69;MQ0=47;MQRankSum=-2.489;QD=22.36;ReadPosRankSum=2.684;VQSLOD=1.9132;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	1/1:0,1:1:3.01:40,3,0	0/0:11,0:4:9.85:0,10,79	0/0:10,0:5:7.61:0,8,50	./.	./.	./.	./.	1/1:0,1:1:3.01:40,3,0	./.	1/1:0,1:1:3.01:40,3,0	./.	./.	1/1:0,1:1:3.01:40,3,0	1/1:4,5:5:15.05:202,15,0	1/1:0,1:1:3.01:40,3,0	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.
chr10	27555415	.	TG	T	22174.61	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=2.502;DP=644;FS=3.403;HRun=1;HaplotypeScore=71.5713;InbreedingCoeff=0.9979;MQ=82.53;MQ0=0;MQRankSum=-7.103;QD=38.97;ReadPosRankSum=4.862;VQSLOD=5.4646;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,36:36:99:1510,108,0	1/1:0,10:10:27.09:378,27,0	0/0:23,0:23:66.21:0,66,1002	0/0:12,0:12:30.55:0,31,485	1/1:0,34:34:96.23:1298,96,0	1/1:0,26:26:72.24:1007,72,0	1/1:0,13:13:33.11:461,33,0	1/1:0,24:24:72.22:972,72,0	1/1:0,19:19:48.16:671,48,0	1/1:0,31:31:93.31:1300,93,0	1/1:1,29:30:87.29:1209,87,0	1/1:0,21:21:57.19:797,57,0	1/1:0,36:36:99:1420,102,0	1/1:0,21:21:57.19:797,57,0	0/0:40,0:40:99:0,120,1891	1/1:0,21:21:60.20:839,60,0	1/1:0,19:19:45.15:629,45,0	1/1:0,13:13:36.12:503,36,0	1/1:0,18:18:51.17:710,51,0	1/1:0,22:22:66.13:879,66,0	1/1:0,24:24:63.21:881,63,0	1/1:0,13:13:39.13:545,39,0	1/1:0,27:27:81.27:1132,81,0	1/1:0,23:23:54.18:755,54,0	1/1:0,27:27:72.71:1008,73,0	1/1:0,27:27:81.27:1133,81,0	1/1:0,26:26:75.25:1044,75,0	1/1:0,8:8:21.07:294,21,0
chr10	27556556	.	G	GT	22703.30	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=4.673;DP=684;FS=13.729;HRun=0;HaplotypeScore=127.8752;InbreedingCoeff=0.9794;MQ=93.29;MQ0=0;MQRankSum=-12.037;QD=36.21;ReadPosRankSum=6.959;VQSLOD=2.8847;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,30:32:68.73:944,69,0	1/1:1,10:11:30.03:413,30,0	0/0:25,0:25:75.20:0,75,987	0/0:32,0:32:80.72:0,81,1016	1/1:1,24:25:71.82:997,72,0	1/1:1,22:23:48.09:655,48,0	1/1:2,36:38:96.32:1313,96,0	1/1:3,28:32:90.13:1228,90,0	1/1:0,14:14:42.14:574,42,0	1/1:2,36:38:99:1383,103,0	1/1:1,30:31:78.26:1077,78,0	1/1:0,26:26:72.24:988,72,0	1/1:2,33:35:93.21:1275,93,0	1/1:0,27:28:78.26:1072,78,0	1/1:0,26:26:72.24:974,72,0	1/1:2,20:22:51.07:684,51,0	1/1:0,23:23:57.19:781,57,0	1/1:1,5:6:11.97:163,12,0	1/1:1,16:17:48.15:646,48,0	1/1:0,28:29:77.08:1056,77,0	1/1:0,23:23:60.16:803,60,0	1/1:0,26:26:72.24:984,72,0	1/1:1,26:27:75.25:1028,75,0	1/1:0,14:14:42.14:570,42,0	1/1:0,22:22:57.19:782,57,0	1/1:0,27:27:81.25:1108,81,0	1/1:2,23:25:68.72:954,69,0	1/1:1,6:7:17.61:251,18,0
chr10	27559328	.	TAA	T	12849.39	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-7.704;DP=517;FS=14.084;HRun=10;HaplotypeScore=68.5365;InbreedingCoeff=0.9812;MQ=73.40;MQ0=3;MQRankSum=-4.084;QD=27.11;ReadPosRankSum=1.996;VQSLOD=3.2599;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,30:31:81.21:903,81,0	1/1:1,8:9:24.05:268,24,0	0/0:14,0:15:23.87:0,24,331	0/0:8,0:7:12.03:0,12,153	1/1:4,24:28:66.12:721,66,0	1/1:4,22:25:57.14:635,57,0	1/1:2,12:14:36.09:401,36,0	1/1:6,18:24:54.11:590,54,0	1/1:3,8:11:24.06:268,24,0	1/1:3,24:27:69.16:760,69,0	1/1:2,28:30:84.22:935,84,0	1/1:0,11:11:30.08:334,30,0	1/1:1,15:16:42.11:468,42,0	1/1:2,17:19:48.13:535,48,0	0/0:2,0:20:47.91:0,48,179	1/1:2,13:15:36.09:401,36,0	1/1:3,9:12:24.06:267,24,0	1/1:3,8:11:24.06:268,24,0	1/1:5,23:28:66.13:723,66,0	1/1:1,22:23:63.16:702,63,0	1/1:1,8:9:24.06:268,24,0	1/1:1,7:8:21.06:234,21,0	1/1:1,16:17:39:435,39,0	1/1:2,7:9:21.05:234,21,0	1/1:3,19:22:54.13:602,54,0	1/1:7,24:30:66.14:726,66,0	1/1:3,27:30:69.13:769,69,0	1/1:0,12:12:36.10:401,36,0
chr10	27560769	.	A	ACCC	4616.19	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-5.073;DP=345;FS=5.068;HRun=8;HaplotypeScore=60.4407;InbreedingCoeff=0.5130;MQ=73.26;MQ0=1;MQRankSum=-4.718;QD=14.84;ReadPosRankSum=2.053;VQSLOD=1.2396;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:23,1:25:43.10:474,43,0	1/1:6,0:8:13.28:202,13,0	0/0:15,0:15:39.02:0,39,465	0/0:19,0:18:26.79:0,27,338	1/1:6,8:15:11.92:123,12,0	1/1:3,0:8:2.99:23,3,0	1/1:11,5:17:14.96:186,15,0	1/1:7,5:13:15.92:261,16,0	1/1:3,0:8:3.01:37,3,0	1/1:8,0:8:8.98:74,9,0	1/1:11,0:11:18.02:230,18,0	1/1:8,0:8:6.01:72,6,0	1/1:2,2:14:12.01:170,12,0	1/1:5,9:15:5.80:83,6,0	1/1:10,0:10:21.05:289,21,0	1/1:4,5:9:8.75:144,9,0	1/1:11,3:15:30.07:469,30,0	1/1:3,9:13:7.27:124,7,0	1/1:7,1:11:7.25:66,7,0	1/1:24,0:24:24.03:303,24,0	1/1:5,0:14:3.46:23,3,0	1/1:1,3:4:3.01:61,3,0	1/1:3,0:6:5.98:46,6,0	1/1:2,8:11:9.03:182,9,0	1/1:11,0:11:24.05:379,24,0	1/1:10,0:10:15.50:202,16,0	1/1:6,9:15:12:205,12,0	1/1:5,0:5:12.03:187,12,0
chr10	27566611	.	G	GT	14156.48	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-6.137;DP=527;FS=2.304;HRun=8;HaplotypeScore=47.0314;InbreedingCoeff=0.9736;MQ=71.89;MQ0=0;MQRankSum=-6.529;QD=27.98;ReadPosRankSum=3.562;VQSLOD=5.1945;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,24:27:63.19:727,63,0	1/1:0,6:6:15.04:173,15,0	0/0:13,0:12:21.38:0,21,182	0/0:7,0:7:14.92:0,15,117	1/1:3,19:22:57.13:642,57,0	1/1:4,20:24:57.14:645,57,0	1/1:1,14:15:36.11:415,36,0	1/1:8,14:22:42.10:472,42,0	1/1:1,18:19:48.14:554,48,0	1/1:5,22:27:69.19:779,69,0	1/1:5,20:25:35.72:664,36,0	1/1:0,14:14:36.11:415,36,0	1/1:0,19:19:51.15:589,51,0	1/1:1,15:16:42.12:485,42,0	1/1:1,11:12:30.09:346,30,0	1/1:2,15:17:45.13:519,45,0	1/1:3,24:27:69.21:796,69,0	1/1:2,10:12:27.08:311,27,0	1/1:4,13:17:39.12:450,39,0	1/1:5,16:21:20.68:492,21,0	1/1:2,10:12:30.09:346,30,0	1/1:3,17:20:51.15:589,51,0	1/1:6,27:33:72.05:831,72,0	1/1:3,10:13:30.09:346,30,0	1/1:1,21:23:63.02:707,63,0	1/1:3,26:29:78.20:878,78,0	1/1:2,25:28:69.04:776,69,0	1/1:0,6:6:18.05:208,18,0
chr10	27567217	.	GTGTGTGTGTGTGTATGTGTGTGTGTA	G	1135.36	PASS	AB=1.000;AC=23;AF=0.442;AN=52;BaseQRankSum=-7.135;DP=468;FS=7.531;HRun=0;HaplotypeScore=220.7342;InbreedingCoeff=-0.3993;MQ=46.80;MQ0=38;MQRankSum=-2.894;QD=3.25;ReadPosRankSum=-5.958;VQSLOD=0.2735;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:21:6.59:7,0,287	0/0:6,0:6:8.82:0,9,239	./.	./.	0/0:19,0:18:3.48:0,3,94	0/1:21,0:18:4.19:4,0,387	0/1:28,0:26:99:138,0,372	1/1:14,0:9:13.47:103,13,0	0/1:8,0:8:53.36:53,0,219	0/1:26,0:20:67.69:68,0,416	0/0:12,0:12:5.95:0,6,138	0/1:14,0:14:7.28:7,0,336	0/1:9,0:9:13.51:14,0,149	0/0:18,0:18:2.84:0,3,14	1/1:4,17:20:6.02:336,6,0	0/0:12,0:11:1.99:0,2,86	0/1:25,0:23:99:157,0,204	0/1:10,0:10:9.77:10,0,558	0/1:14,0:13:57.21:57,0,263	0/1:15,0:14:54.96:55,0,183	0/0:23,0:20:20.08:0,20,387	0/1:10,0:10:23.88:24,0,355	0/1:14,0:14:46.92:47,0,424	0/1:26,0:24:79.31:79,0,272	0/1:23,0:22:4.59:5,0,41	0/1:16,0:15:65.16:65,0,246	0/1:26,0:25:23.63:24,0,781	1/1:6,0:4:3.01:31,3,0
chr10	27567223	.	GTGTGTGTATGTGTGTGTGTA	G	5745.55	PASS	AB=0.940;AC=46;AF=0.821;AN=56;BaseQRankSum=-3.825;DP=452;FS=1.857;HRun=0;HaplotypeScore=162.0237;InbreedingCoeff=0.1704;MQ=46.29;MQ0=38;MQRankSum=2.841;QD=13.75;ReadPosRankSum=-3.024;VQSLOD=3.2130;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:19:9.87:179,10,0	0/1:5,0:5:4.84:41,0,5	0/0:16,0:4:9.03:0,9,167	0/0:18,0:2:3.01:0,3,48	0/1:8,10:17:0.06:0,0,0	1/1:22,0:19:30.45:339,30,0	0/1:28,0:26:13.16:330,0,13	1/1:12,0:8:17.15:144,17,0	1/1:10,1:11:5.56:388,6,0	1/1:25,0:19:41.80:567,42,0	0/1:10,0:10:7.77:41,0,8	1/1:13,0:13:0.11:93,0,0	1/1:9,0:9:12.77:92,13,0	1/1:18,0:18:2.98:64,3,0	1/1:20,0:19:6.02:216,6,0	1/1:13,0:12:1.77:4,2,0	1/1:22,0:22:38.82:452,39,0	0/1:10,0:10:57.35:139,0,57	1/1:12,0:11:9.60:235,10,0	1/1:13,0:12:20.68:206,21,0	1/1:20,0:16:8.22:211,8,0	1/1:11,0:11:27.03:338,27,0	0/1:12,0:12:10.58:182,0,11	1/1:25,0:23:30.24:391,30,0	1/1:21,0:20:6.02:118,6,0	1/1:15,0:14:34.30:447,34,0	1/1:24,0:23:19.62:418,20,0	1/1:8,0:6:3.01:109,3,0
chr10	27567225	.	GTGTGTATGTGTGTGTGTA	G	6971.04	PASS	AB=0.955;AC=50;AF=0.893;AN=56;BaseQRankSum=-0.101;DP=447;FS=6.561;HRun=0;HaplotypeScore=145.2878;InbreedingCoeff=0.3459;MQ=46.45;MQ0=39;MQRankSum=2.301;QD=16.88;ReadPosRankSum=0.988;VQSLOD=3.3575;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:18:19.83:219,20,0	1/1:5,0:5:9.46:76,9,0	0/0:16,0:3:9.03:0,9,167	0/0:18,0:2:3.01:0,3,48	1/1:17,0:16:2.84:24,3,0	1/1:22,0:19:32.92:322,33,0	1/1:27,0:25:38.55:428,39,0	1/1:12,0:8:17.30:145,17,0	1/1:11,0:11:25.40:435,25,0	1/1:25,0:19:52.34:637,52,0	1/1:11,0:11:12:124,12,0	1/1:12,0:12:17.83:141,18,0	1/1:9,0:9:13.82:134,14,0	1/1:2,16:18:2.98:108,3,0	1/1:19,0:18:6.02:188,6,0	1/1:14,0:13:3.84:21,4,0	1/1:23,0:22:41.66:429,42,0	0/1:9,1:10:61.84:240,0,62	1/1:10,0:9:24.03:317,24,0	1/1:13,0:12:21.01:242,21,0	1/1:20,0:16:24.91:253,25,0	1/1:11,0:11:27.03:338,27,0	0/1:11,0:11:4.11:240,0,4	1/1:27,0:25:36.79:508,37,0	1/1:3,18:20:6.02:205,6,0	1/1:15,0:13:36.07:478,36,0	1/1:23,0:22:56.33:567,56,0	1/1:2,6:6:3.01:152,3,0
chr10	27567227	.	GTGTATGTGTGTGTGTA	G	6757.22	PASS	AB=1.000;AC=50;AF=0.893;AN=56;BaseQRankSum=-2.569;DP=441;FS=0.000;HRun=0;HaplotypeScore=133.6958;InbreedingCoeff=0.3404;MQ=46.21;MQ0=39;MQRankSum=4.047;QD=16.60;ReadPosRankSum=-0.007;VQSLOD=3.2618;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:18:16.55:183,17,0	1/1:4,0:4:9.46:76,9,0	0/0:16,0:3:9.03:0,9,167	0/0:18,0:1:3.01:0,3,48	1/1:17,0:16:2.26:23,2,0	1/1:21,0:18:27.54:295,28,0	1/1:26,0:24:29.84:414,30,0	1/1:10,0:6:17.42:145,17,0	1/1:11,0:11:24.04:408,24,0	1/1:25,0:18:46.76:619,47,0	1/1:11,0:11:12:124,12,0	1/1:12,0:12:14.21:145,14,0	1/1:10,0:10:17.30:182,17,0	1/1:18,0:18:2.98:76,3,0	1/1:19,0:18:6.02:160,6,0	1/1:2,12:13:3.48:55,3,0	1/1:23,0:21:41.95:426,42,0	0/1:11,0:11:44.42:215,0,44	1/1:9,0:8:24.03:317,24,0	1/1:12,0:11:21.48:243,21,0	1/1:20,0:16:27.92:300,28,0	1/1:11,0:11:27.03:338,27,0	0/1:10,0:10:4.10:262,0,4	1/1:27,0:25:36.90:474,37,0	1/1:20,0:20:6.02:142,6,0	1/1:15,0:13:36.07:478,36,0	1/1:24,0:23:54.89:534,55,0	1/1:8,0:6:3.01:121,3,0
chr10	27568290	.	G	GGA	1240.85	PASS	AB=1.000;AC=40;AF=0.870;AN=46;BaseQRankSum=-2.333;DP=543;FS=36.764;HRun=0;HaplotypeScore=89.0951;InbreedingCoeff=0.2436;MQ=54.51;MQ0=18;MQRankSum=0.747;QD=3.35;ReadPosRankSum=1.327;VQSLOD=0.5406;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:27:4.65:0,5,61	1/1:6,0:6:2.99:23,3,0	./.	./.	./.	1/1:19,0:19:9.03:127,9,0	0/1:27,0:27:0:0,0,0	1/1:29,0:29:0.89:2,1,0	1/1:16,0:16:9:90,9,0	1/1:16,0:15:3.95:43,4,0	1/1:11,0:11:2.96:39,3,0	./.	1/1:22,0:22:3.01:41,3,0	1/1:17,0:17:8.48:61,8,0	0/0:22,0:22:5.58:0,6,28	1/1:12,1:13:2.96:44,3,0	1/1:11,0:11:5.99:58,6,0	1/1:14,0:14:6.85:47,7,0	./.	1/1:15,0:15:3.01:43,3,0	1/1:27,0:27:12.04:169,12,0	1/1:20,0:20:2.96:42,3,0	1/1:14,0:13:3.01:41,3,0	1/1:30,0:27:21.05:277,21,0	1/1:16,2:18:3:26,3,0	1/1:16,0:15:1.25:3,1,0	0/1:19,0:19:20.91:55,0,21	1/1:9,0:9:9.03:118,9,0
chr10	27569132	.	CTG	C	2613.54	PASS	AB=0.957;AC=27;AF=0.482;AN=56;BaseQRankSum=-7.925;DP=500;FS=68.296;HRun=0;HaplotypeScore=183.1969;InbreedingCoeff=-0.7502;MQ=46.36;MQ0=4;MQRankSum=3.811;QD=5.38;ReadPosRankSum=-3.699;VQSLOD=0.3939;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:44,2:46:99:272,0,161	0/0:5,0:5:5.56:0,6,36	0/0:9,0:4:9:0,9,114	0/1:17,0:8:6.60:7,0,97	1/1:13,0:10:2.93:65,3,0	0/1:26,2:28:99:174,0,189	0/1:19,0:19:62.63:192,0,63	0/1:24,11:33:99:223,0,402	0/1:20,1:21:78.66:79,0,154	0/1:10,1:8:1.98:189,0,2	0/1:12,0:12:62.67:101,0,63	0/1:17,0:17:38.02:38,0,106	0/1:21,0:21:42.62:43,0,163	0/1:12,5:17:14.22:14,0,156	0/1:20,1:21:40.65:41,0,174	0/1:17,0:17:87.99:112,0,88	0/1:17,0:17:45.24:45,0,91	0/1:6,1:7:4.56:133,0,5	0/1:19,0:19:35.70:36,0,152	0/1:11,1:12:5.12:191,0,5	0/1:23,0:23:99:121,0,166	0/1:13,0:13:19.67:132,0,20	0/1:14,1:14:19.89:20,0,43	0/1:24,2:26:13.16:117,0,13	0/1:12,0:12:72.98:73,0,84	0/1:23,0:23:99:207,0,143	0/1:17,0:16:68.74:107,0,69	0/1:7,0:7:30.76:31,0,83
chr10	27569134	.	G	GTCTCTC	7972.74	PASS	AB=0.928;AC=32;AF=0.571;AN=56;BaseQRankSum=0.957;DP=496;FS=10.404;HRun=0;HaplotypeScore=193.5063;InbreedingCoeff=-0.5657;MQ=46.29;MQ0=4;MQRankSum=-1.624;QD=16.37;ReadPosRankSum=7.600;VQSLOD=2.5924;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:42,3:45:67.78:605,0,68	1/1:4,1:5:6.02:126,6,0	0/0:9,0:4:9:0,9,114	0/1:15,0:7:6.52:7,0,97	1/1:12,1:10:14.01:167,14,0	0/1:27,2:29:98.30:452,0,98	0/1:19,0:19:35.07:239,0,35	0/1:35,0:33:99:249,0,303	0/1:17,5:22:99:551,0,101	1/1:11,0:8:20.86:254,21,0	0/1:11,1:12:51.63:188,0,52	0/1:13,5:18:5.99:561,0,6	0/1:16,3:19:9.97:486,0,10	0/1:14,3:17:19.25:442,0,19	0/1:20,1:21:92.90:226,0,93	0/1:14,3:17:13.72:485,0,14	0/1:17,0:17:45.50:46,0,91	0/1:6,1:7:4.95:359,0,5	0/1:18,0:18:91.47:308,0,91	0/1:12,0:12:1.13:219,0,1	0/1:22,0:22:99:135,0,118	1/1:12,2:14:0.10:311,0,0	0/1:14,0:13:19.28:94,0,19	0/1:22,4:26:3.91:206,0,4	0/1:10,1:11:74.29:163,0,74	0/1:21,1:22:47.27:540,0,47	0/1:16,2:17:24.27:332,0,24	1/1:7,0:7:20.32:222,20,0
chr10	27569150	.	C	CTG	1517.56	PASS	AB=0.955;AC=19;AF=0.339;AN=56;BaseQRankSum=8.955;DP=492;FS=67.505;HRun=0;HaplotypeScore=172.8534;InbreedingCoeff=-0.4465;MQ=51.17;MQ0=4;MQRankSum=-6.405;QD=4.61;ReadPosRankSum=-2.145;VQSLOD=0.7739;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:43,3:46:99:144,0,561	1/1:3,1:4:5.95:57,6,0	0/0:7,0:4:8.99:0,9,112	0/0:13,0:8:13.26:0,13,156	0/1:10,1:9:28.60:29,0,165	0/1:25,1:26:99:122,0,396	0/0:17,0:17:14.40:0,14,371	0/0:32,0:29:1.24:0,1,758	0/1:20,1:21:82.80:83,0,305	0/1:13,0:10:10.38:10,0,360	0/1:12,0:12:12.85:13,0,275	0/1:15,2:17:99:163,0,154	0/1:19,2:21:99:256,0,262	0/1:15,2:17:99:236,0,128	0/1:20,0:20:73.10:73,0,166	0/1:15,1:16:90.52:91,0,274	0/0:17,0:17:27.04:0,27,370	0/0:7,0:7:1.77:0,2,197	0/1:16,1:16:99:109,0,405	0/0:12,0:12:24.01:0,24,303	0/1:20,1:21:34.41:34,0,313	0/1:13,0:13:27.03:27,0,249	0/0:19,0:18:2.57:0,3,215	0/0:28,0:28:2.99:0,3,236	0/0:11,0:11:5.50:0,6,260	0/1:23,0:23:99:113,0,444	0/1:19,0:18:4.24:4,0,510	0/1:11,1:12:99:106,0,302
chr10	27569339	.	AATAT	A	2477.12	PASS	AB=0.875;AC=42;AF=0.955;AN=44;BaseQRankSum=1.372;DP=184;FS=3.082;HRun=0;HaplotypeScore=40.5535;InbreedingCoeff=-0.0074;MQ=84.52;MQ0=3;MQRankSum=-1.081;QD=15.48;ReadPosRankSum=1.049;VQSLOD=2.8309;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,5:10:12.04:196,12,0	./.	./.	0/1:12,0:8:0.18:0,0,0	1/1:7,4:11:3.01:49,3,0	1/1:3,4:7:12.04:196,12,0	1/1:3,1:4:3.01:49,3,0	1/1:12,4:20:9.03:324,9,0	1/1:3,0:3:2.98:22,3,0	./.	1/1:5,0:8:6.01:56,6,0	1/1:1,1:2:3.01:49,3,0	1/1:3,1:4:3.01:49,3,0	1/1:4,2:6:3.01:49,3,0	1/1:2,0:7:9.01:84,9,0	1/1:2,3:5:3.01:49,3,0	1/1:5,6:11:15.05:245,15,0	1/1:3,4:8:9.02:126,9,0	1/1:5,5:11:18.04:258,18,0	1/1:7,1:8:3.01:49,3,0	1/1:0,2:2:6.02:98,6,0	./.	./.	./.	1/1:2,3:6:9.02:126,9,0	0/1:2,1:3:5.33:43,0,5	1/1:2,4:6:12.04:196,12,0	1/1:0,5:5:15.05:245,15,0
chr10	27571060	.	GGTGTGTAT	G	5760.50	PASS	AB=0.994;AC=31;AF=0.554;AN=56;BaseQRankSum=-10.699;DP=592;FS=5.510;HRun=0;HaplotypeScore=171.9934;InbreedingCoeff=-0.4877;MQ=66.88;MQ0=6;MQRankSum=0.828;QD=10.89;ReadPosRankSum=-1.955;VQSLOD=3.1385;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:39,0:39:28.62:313,0,29	0/1:11,0:11:35.68:164,0,36	0/0:29,0:19:44.95:0,45,457	0/0:34,0:25:40.48:0,40,472	0/1:22,0:22:99:171,0,128	0/1:17,0:17:78:177,0,78	0/1:26,0:26:9.34:335,0,9	1/1:15,0:15:1.66:258,2,0	0/1:31,0:31:99:249,0,161	0/1:30,0:30:27.21:495,0,27	1/1:14,0:14:26.96:221,27,0	0/1:21,1:21:83.23:105,0,83	0/1:16,0:15:78.77:116,0,79	0/1:18,0:18:6.41:172,0,6	1/1:13,2:15:38.94:374,39,0	0/1:20,0:19:75.27:209,0,75	0/1:24,0:24:91.52:92,0,173	0/1:15,0:15:7.90:151,0,8	0/1:17,0:16:21.26:200,0,21	1/1:23,0:23:13.49:317,13,0	0/1:30,0:28:11.40:187,0,11	1/1:11,0:11:20.95:169,21,0	0/1:17,0:17:11.87:225,0,12	0/1:29,0:29:99:215,0,931	0/1:13,0:13:66.68:100,0,67	0/1:25,0:24:2.01:478,0,2	0/1:17,0:17:44.30:122,0,44	0/1:10,1:11:48.61:147,0,49
chr10	27571061	.	GTGTGTA	G	8147.56	PASS	AB=0.980;AC=49;AF=0.875;AN=56;BaseQRankSum=-0.645;DP=599;FS=3.592;HRun=0;HaplotypeScore=147.7953;InbreedingCoeff=0.5000;MQ=66.54;MQ0=8;MQRankSum=-1.711;QD=15.20;ReadPosRankSum=3.633;VQSLOD=4.0337;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:37,2:39:41.84:441,42,0	1/1:11,0:11:4.78:180,5,0	0/0:29,0:19:44.58:0,45,457	0/0:34,0:25:40.26:0,40,471	1/1:22,0:22:31.97:313,32,0	1/1:17,0:17:37.15:272,37,0	1/1:25,1:26:53.39:460,53,0	1/1:16,0:15:38.96:336,39,0	1/1:30,1:31:64.59:557,65,0	1/1:30,0:30:69.61:613,70,0	1/1:13,0:13:26.96:221,27,0	1/1:22,0:21:37.14:247,37,0	0/1:15,1:15:5.54:199,0,6	1/1:17,1:18:37.92:313,38,0	1/1:16,0:15:38.94:342,39,0	1/1:17,3:19:24.94:308,25,0	1/1:24,1:25:20.68:257,21,0	1/1:15,1:16:37.82:401,38,0	1/1:15,0:14:17.61:271,18,0	1/1:21,1:22:50.67:404,51,0	1/1:29,2:28:35.03:272,35,0	1/1:11,0:11:20.95:169,21,0	0/1:18,0:18:3.62:238,0,4	0/1:35,0:35:99:200,0,819	1/1:13,0:13:7.96:171,8,0	1/1:24,1:24:37.04:585,37,0	1/1:17,0:17:37.39:235,37,0	1/1:11,0:11:6.24:145,6,0
chr10	27571063	.	GTGTA	G	11409.10	PASS	AB=1.000;AC=51;AF=0.911;AN=56;BaseQRankSum=0.329;DP=606;FS=5.217;HRun=0;HaplotypeScore=118.4008;InbreedingCoeff=0.7515;MQ=64.50;MQ0=10;MQRankSum=-0.976;QD=20.93;ReadPosRankSum=4.641;VQSLOD=3.9442;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:33,5:39:59.85:540,60,0	1/1:11,1:11:27.42:251,27,0	0/0:28,0:18:44.75:0,45,457	0/0:33,0:24:40.26:0,40,471	1/1:20,2:22:53.69:513,54,0	1/1:13,2:15:41.96:406,42,0	1/1:24,3:27:59.93:588,60,0	1/1:16,0:15:38.96:336,39,0	1/1:21,11:32:89.97:1080,90,0	1/1:28,1:29:75:712,75,0	1/1:14,0:14:32.96:293,33,0	1/1:18,5:22:41.97:494,42,0	1/1:14,3:16:21.92:419,22,0	1/1:12,5:17:38.73:414,39,0	1/1:17,0:16:38.94:328,39,0	1/1:16,4:19:48.39:512,48,0	1/1:16,9:26:49.07:633,49,0	1/1:15,1:16:35.81:414,36,0	1/1:14,0:13:34.52:328,35,0	1/1:19,1:20:50.67:404,51,0	1/1:25,6:28:35.56:361,36,0	1/1:12,0:12:20.95:169,21,0	1/1:19,1:20:27.42:352,27,0	0/1:36,0:36:99:240,0,364	1/1:12,2:14:26.92:259,27,0	1/1:26,0:25:69.20:622,69,0	1/1:13,6:17:38.95:499,39,0	1/1:8,3:11:7.77:243,8,0
chr10	27571065	.	GTA	G	10341.45	PASS	AB=0.947;AC=51;AF=0.911;AN=56;BaseQRankSum=3.031;DP=624;FS=3.306;HRun=0;HaplotypeScore=110.3752;InbreedingCoeff=0.7788;MQ=61.54;MQ0=10;MQRankSum=-1.269;QD=18.27;ReadPosRankSum=1.913;VQSLOD=4.7174;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:41,0:41:68.74:540,69,0	1/1:12,1:12:32.94:287,33,0	0/0:26,0:16:44.16:0,44,456	0/0:32,0:23:40.26:0,40,471	1/1:21,2:23:53.66:426,54,0	1/1:22,0:22:50.90:414,51,0	1/1:27,0:27:65.84:536,66,0	1/1:15,0:14:38.96:336,39,0	1/1:33,0:33:89.74:735,90,0	1/1:28,0:28:77.98:704,78,0	1/1:13,0:13:32.94:269,33,0	1/1:24,0:23:41.84:333,42,0	1/1:17,0:16:38.75:300,39,0	1/1:18,0:18:41.66:336,42,0	1/1:17,0:16:38.91:314,39,0	1/1:22,1:22:59.79:493,60,0	1/1:26,0:26:49.34:383,49,0	1/1:18,0:18:44.51:340,45,0	1/1:14,0:13:34.99:292,35,0	1/1:20,0:20:53.66:428,54,0	1/1:33,0:29:42:344,42,0	1/1:12,0:12:23.95:193,24,0	1/1:20,0:20:44.89:361,45,0	0/1:34,2:36:45.30:526,0,45	1/1:13,0:13:26.98:227,27,0	1/1:26,1:26:71.88:655,72,0	1/1:19,0:17:38.85:305,39,0	1/1:14,0:14:35.77:266,36,0
chr10	27571129	.	A	ATG	17916.83	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-6.100;DP=611;FS=28.639;HRun=0;HaplotypeScore=106.5784;InbreedingCoeff=0.9458;MQ=57.30;MQ0=6;MQRankSum=2.182;QD=33.81;ReadPosRankSum=2.530;VQSLOD=3.9524;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,22:28:57.19:938,57,0	1/1:1,6:8:21.07:345,21,0	0/0:37,0:23:34.33:0,34,354	0/0:44,0:23:21.33:0,21,230	1/1:1,7:8:21.07:349,21,0	1/1:5,10:16:29.82:465,30,0	1/1:8,29:37:62.92:1047,63,0	1/1:3,26:29:71.45:1214,71,0	1/1:5,18:23:13.30:751,13,0	1/1:4,13:17:39.11:621,39,0	1/1:2,7:9:18.06:299,18,0	1/1:7,13:20:42.13:663,42,0	1/1:2,12:14:39.13:638,39,0	1/1:6,22:28:16.30:797,16,0	1/1:3,15:18:36.12:585,36,0	1/1:7,14:21:36.10:598,36,0	1/1:7,26:32:69.24:1145,69,0	1/1:5,14:19:42.14:690,42,0	1/1:6,15:21:42.14:687,42,0	1/1:0,7:7:18.06:295,18,0	1/1:9,40:50:43.20:1258,43,0	1/1:4,14:18:35.92:582,36,0	1/1:2,10:12:30.10:499,30,0	1/1:12,27:39:84.26:1377,84,0	1/1:2,7:9:15.05:250,15,0	1/1:2,14:16:42.14:698,42,0	1/1:1,16:18:45.01:742,45,0	1/1:3,9:12:12.33:384,12,0
chr10	27571278	.	ATG	A	2110.09	PASS	AB=0.709;AC=41;AF=0.820;AN=50;BaseQRankSum=-1.564;DP=569;FS=3.991;HRun=0;HaplotypeScore=164.9777;InbreedingCoeff=0.4510;MQ=52.69;MQ0=12;MQRankSum=-1.408;QD=4.45;ReadPosRankSum=2.546;VQSLOD=2.7254;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:8,21:28:3.01:33,3,0	1/1:2,8:10:8.78:80,9,0	./.	0/0:13,0:5:3.01:0,3,39	./.	1/1:9,3:12:8.90:95,9,0	0/0:10,12:22:2.67:0,3,17	1/1:12,6:18:20.98:212,21,0	1/1:9,22:31:6.90:65,7,0	1/1:12,4:16:29.34:321,29,0	1/1:4,6:10:2.90:33,3,0	1/1:25,5:28:1.82:5,2,0	1/1:4,14:17:14.86:143,15,0	1/1:4,19:23:9.02:98,9,0	0/0:24,0:24:31.94:0,32,213	1/1:6,12:18:8.61:72,9,0	1/1:9,16:24:5.96:51,6,0	0/1:15,1:16:5.13:189,0,5	1/1:9,6:13:17.95:167,18,0	1/1:15,3:17:0.47:1,0,0	1/1:42,44:85:2.46:7,2,0	0/1:5,15:20:0:0,0,0	./.	0/1:9,15:23:0.04:0,0,1	1/1:16,5:20:20.38:194,20,0	1/1:9,9:19:29.24:323,29,0	1/1:5,3:8:3.48:36,3,0	1/1:6,0:6:11.62:108,12,0
chr10	27571290	.	GTGTGTGTGTA	G	4083.33	PASS	AB=1.000;AC=46;AF=0.885;AN=52;BaseQRankSum=0.080;DP=641;FS=0.786;HRun=0;HaplotypeScore=211.2022;InbreedingCoeff=0.0633;MQ=49.57;MQ0=18;MQRankSum=1.598;QD=6.68;ReadPosRankSum=-0.345;VQSLOD=2.3103;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:35,0:33:12.46:164,12,0	1/1:10,0:10:11.49:142,11,0	./.	0/0:6,0:2:2.96:0,3,19	./.	1/1:13,0:13:7.63:46,8,0	0/1:24,0:22:29.69:61,0,30	0/1:23,0:22:30.71:31,0,108	1/1:37,0:36:29.43:256,29,0	1/1:30,0:30:37.20:543,37,0	1/1:12,0:12:5.68:115,6,0	1/1:10,20:28:2.62:62,3,0	1/1:23,0:23:32.17:291,32,0	1/1:30,0:29:23.60:266,24,0	0/1:26,0:26:50.48:50,0,863	1/1:19,0:19:16.65:189,17,0	1/1:29,0:28:23.68:210,24,0	0/1:18,0:18:55.19:230,0,55	1/1:9,0:9:8.27:173,8,0	1/1:24,0:23:0.86:2,1,0	1/1:89,0:86:12.48:238,12,0	1/1:21,0:21:7.46:52,7,0	1/1:18,0:17:3.25:24,3,0	1/1:26,0:24:2.42:23,2,0	1/1:27,0:26:23.85:334,24,0	1/1:20,0:18:36.12:379,36,0	1/1:10,0:9:11.85:111,12,0	1/1:7,0:7:14.53:90,15,0
chr10	27571298	.	GTA	G	3837.04	PASS	AB=0.861;AC=46;AF=0.885;AN=52;BaseQRankSum=1.777;DP=641;FS=0.905;HRun=0;HaplotypeScore=166.7760;InbreedingCoeff=0.2032;MQ=49.57;MQ0=24;MQRankSum=4.250;QD=6.26;ReadPosRankSum=-3.575;VQSLOD=2.9391;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:35,0:33:18.77:138,19,0	1/1:12,0:12:17.42:115,17,0	./.	0/0:4,0:1:2.96:0,3,19	./.	1/1:14,0:14:11.29:71,11,0	1/1:25,0:22:11.86:99,12,0	0/1:26,0:23:79.66:80,0,85	1/1:35,0:34:32.60:236,33,0	1/1:9,26:34:55.42:442,55,0	1/1:12,0:12:11.81:88,12,0	1/1:27,0:25:2.60:17,3,0	1/1:24,0:23:34.93:231,35,0	1/1:32,0:31:33.05:234,33,0	0/1:20,2:22:1.34:110,0,1	1/1:18,0:18:19.28:140,19,0	1/1:30,0:29:29.64:219,30,0	0/1:17,0:17:20.84:186,0,21	1/1:8,0:8:5.82:64,6,0	0/1:3,24:27:0.02:0,0,0	1/1:77,0:74:41.70:324,42,0	1/1:26,0:26:16.49:119,16,0	1/1:19,0:18:9.19:74,9,0	1/1:26,0:24:2.35:23,2,0	1/1:24,0:23:38:269,38,0	1/1:19,0:17:41.88:299,42,0	1/1:15,0:13:20.75:147,21,0	1/1:7,0:7:17.54:113,18,0
chr10	27571300	.	ATGTGTGTG	A	4658.49	PASS	AB=0.917;AC=44;AF=0.880;AN=50;BaseQRankSum=-5.085;DP=654;FS=9.692;HRun=0;HaplotypeScore=193.7195;InbreedingCoeff=0.2904;MQ=49.40;MQ0=25;MQRankSum=1.445;QD=8.12;ReadPosRankSum=-0.615;VQSLOD=2.7576;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:32,4:34:10.17:127,10,0	1/1:11,1:12:8.33:131,8,0	./.	./.	./.	1/1:14,1:15:5:68,5,0	1/1:23,3:22:11.44:147,11,0	1/1:24,0:21:9.01:117,9,0	1/1:31,3:36:0.16:324,0,0	1/1:32,2:34:36.24:483,36,0	1/1:10,2:12:5.80:104,6,0	1/1:25,3:26:5.61:67,6,0	1/1:24,1:25:24.91:283,25,0	1/1:25,4:30:24.26:307,24,0	0/0:21,0:21:41.04:0,41,759	1/1:17,3:20:5.54:176,6,0	1/1:28,1:28:30.33:354,30,0	0/1:16,0:17:77.66:246,0,78	0/1:7,1:8:15.74:133,0,16	0/0:28,0:28:2.29:0,2,12	1/1:77,1:74:39.55:426,40,0	1/1:23,3:26:14.81:180,15,0	1/1:22,0:20:1.60:53,2,0	1/1:22,3:23:2.48:47,2,0	1/1:23,2:24:18.36:254,18,0	1/1:18,1:18:26.29:359,26,0	1/1:13,2:13:21.01:272,21,0	1/1:7,0:7:0.47:1,0,0
chr10	27575228	.	A	ATG	309.14	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=-3.949;DP=352;FS=0.000;HRun=0;HaplotypeScore=40.5574;InbreedingCoeff=0.5973;MQ=66.45;MQ0=3;MQRankSum=-0.306;QD=9.97;ReadPosRankSum=1.390;VQSLOD=2.9587;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:42.11:0,42,513	0/0:5,0:5:15.05:0,15,189	0/1:15,0:10:13.53:14,0,124	0/0:10,0:7:15:0,15,151	0/0:15,0:15:39.12:0,39,491	0/0:13,0:13:33.08:0,33,389	0/0:9,0:9:21.07:0,21,264	0/0:33,0:33:75.23:0,75,925	0/0:10,0:10:18.06:0,18,227	0/0:10,0:10:24.08:0,24,303	0/0:10,0:10:27.09:0,27,341	0/0:10,0:10:24.06:0,24,287	0/0:11,0:11:30.10:0,30,378	0/0:5,0:5:12.04:0,12,151	1/1:5,11:15:24.08:398,24,0	0/0:7,0:7:15.05:0,15,189	0/0:20,0:20:48.15:0,48,602	0/0:10,0:10:24.08:0,24,303	0/0:20,0:20:33.06:0,33,397	0/0:15,0:15:36.12:0,36,454	0/0:7,0:7:18.06:0,18,227	0/0:8,0:8:18.06:0,18,227	0/0:12,0:12:33.11:0,33,416	0/0:7,0:7:15.05:0,15,189	0/0:13,0:13:33.09:0,33,403	0/0:11,0:11:24.08:0,24,303	0/0:22,0:22:54.17:0,54,680	0/0:9,0:9:27.09:0,27,340
chr10	27576438	.	TTG	T	15408.69	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=5.519;DP=627;FS=4.143;HRun=0;HaplotypeScore=132.4760;InbreedingCoeff=0.9940;MQ=67.99;MQ0=2;MQRankSum=-5.965;QD=28.12;ReadPosRankSum=4.623;VQSLOD=6.1238;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,34:44:93.21:1161,93,0	1/1:2,7:9:18.06:229,18,0	0/0:24,0:23:51.13:0,51,791	0/0:30,0:28:56.36:0,56,860	1/1:5,22:27:56.93:616,57,0	1/1:1,16:17:33.06:402,33,0	1/1:2,18:20:42.13:528,42,0	1/1:8,19:27:59.99:727,60,0	1/1:4,19:23:51.16:649,51,0	1/1:4,30:34:90.25:1125,90,0	1/1:1,14:15:39.04:459,39,0	1/1:3,16:19:45.14:567,45,0	1/1:3,19:22:45.14:572,45,0	1/1:0,17:17:51.16:644,51,0	0/0:25,0:25:54.17:0,54,878	1/1:1,22:23:63.20:802,63,0	1/1:0,23:23:48.15:611,48,0	1/1:2,16:18:39.08:478,39,0	1/1:8,20:28:57.16:700,57,0	1/1:4,19:23:48.11:593,48,0	1/1:6,10:15:33.02:376,33,0	1/1:4,16:20:45.01:566,45,0	1/1:4,19:23:54.13:669,54,0	1/1:2,16:18:45.14:573,45,0	1/1:3,18:21:51.08:613,51,0	1/1:1,15:16:45.09:530,45,0	1/1:6,31:37:77.84:989,78,0	1/1:1,7:8:18.06:229,18,0
chr10	27576721	.	TG	T	20722.10	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-4.622;DP=678;FS=30.946;HRun=4;HaplotypeScore=84.9311;InbreedingCoeff=0.9920;MQ=67.76;MQ0=0;MQRankSum=-1.723;QD=32.23;ReadPosRankSum=5.612;VQSLOD=2.7377;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,50:52:99:1690,141,0	1/1:0,12:12:33.10:395,33,0	0/0:18,0:17:42.12:0,42,540	0/0:17,0:17:39.04:0,39,488	1/1:1,20:21:54.17:648,54,0	1/1:0,24:24:72.22:864,72,0	1/1:2,26:28:69.21:828,69,0	1/1:3,28:31:84.26:1008,84,0	1/1:0,22:22:66.20:792,66,0	1/1:1,36:37:99:1295,108,0	1/1:1,18:19:51.16:612,51,0	1/1:0,15:15:45.14:540,45,0	1/1:2,21:23:57.17:684,57,0	1/1:1,18:19:54.17:648,54,0	1/1:0,24:24:69.21:828,69,0	1/1:0,26:26:72.22:864,72,0	1/1:2,21:23:60.18:720,60,0	1/1:4,14:17:15.53:441,16,0	1/1:1,21:22:57.09:670,57,0	1/1:1,19:20:51.15:609,51,0	1/1:1,51:52:99:1691,141,0	1/1:2,18:20:51.16:612,51,0	1/1:0,24:24:63.19:756,63,0	1/1:1,32:33:84.26:1008,84,0	1/1:0,18:18:54.17:648,54,0	1/1:1,18:19:54.17:647,54,0	1/1:1,28:29:75.23:899,75,0	1/1:0,12:12:27.08:324,27,0
chr10	27577238	.	C	CA	748.52	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-2.114;DP=592;FS=0.863;HRun=1;HaplotypeScore=71.5341;InbreedingCoeff=0.9944;MQ=82.05;MQ0=0;MQRankSum=-2.935;QD=32.54;ReadPosRankSum=-0.897;VQSLOD=3.1074;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:69.21:0,69,881	0/0:7,0:7:21.07:0,21,272	0/0:18,0:18:45.09:0,45,520	0/0:26,0:26:71.29:0,71,870	0/0:26,0:26:78.21:0,78,968	0/0:10,0:10:30.10:0,30,389	0/0:17,0:17:51.15:0,51,646	0/0:32,0:32:90.26:0,90,1119	0/0:25,0:25:75.24:0,75,972	0/0:20,0:20:57.17:0,57,714	0/0:20,0:20:57.16:0,57,712	0/0:22,0:22:66.19:0,66,819	0/0:17,0:17:51.15:0,51,647	0/0:17,0:17:45.13:0,45,568	1/1:0,23:23:57.19:843,57,0	0/0:22,0:22:63.17:0,63,777	0/0:26,0:26:78.20:0,78,966	0/0:14,0:14:42.08:0,42,524	0/0:17,0:17:51.17:0,51,661	0/0:23,0:23:63.15:0,63,771	0/0:41,0:41:99:0,123,1513	0/0:23,0:23:63.17:0,63,766	0/0:16,0:16:48.16:0,48,622	0/0:29,0:29:87.24:0,87,1084	0/0:15,0:15:45.13:0,45,569	0/0:21,0:21:63.20:0,63,805	0/0:31,0:31:84.20:0,84,1062	0/0:9,0:9:27.02:0,27,302
chr10	27578526	.	GCATACA	G	3716.79	PASS	AB=0.618;AC=37;AF=0.661;AN=56;BaseQRankSum=3.504;DP=763;FS=3.306;HRun=0;HaplotypeScore=244.1877;InbreedingCoeff=0.4590;MQ=54.17;MQ0=7;MQRankSum=0.972;QD=6.29;ReadPosRankSum=2.767;VQSLOD=2.4786;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:13,14:27:0.07:1,0,0	1/1:4,14:18:8.82:117,9,0	0/0:38,0:15:6.01:0,6,59	0/0:37,0:17:9.60:0,10,157	0/1:13,23:36:0.20:1,0,0	1/1:7,29:36:11.76:234,12,0	0/0:18,9:27:0:0,0,0	1/1:23,17:39:47.80:480,48,0	1/1:1,19:20:3.01:53,3,0	1/1:10,19:29:56.79:786,57,0	0/0:6,20:26:0:0,0,1	1/1:4,25:29:9.03:187,9,0	1/1:9,16:25:6.02:120,6,0	1/1:6,21:27:3.01:62,3,0	0/1:9,16:25:0.07:0,0,0	1/1:8,23:31:9.03:178,9,0	1/1:13,0:13:14.98:178,15,0	0/1:6,8:14:0.09:173,0,0	1/1:14,5:18:14.88:178,15,0	0/1:10,23:33:0.07:0,0,0	0/0:23,20:42:0:0,0,0	0/1:9,28:37:0.35:0,0,0	0/1:6,19:25:0.69:1,0,1	0/1:13,10:23:0:0,0,0	0/1:10,15:25:0:0,0,0	1/1:12,15:27:45.03:691,45,0	1/1:7,18:25:12.01:242,12,0	1/1:1,6:7:3.01:34,3,0
chr10	27578911	.	CAA	C	7179.14	PASS	AB=0.574;AC=49;AF=0.875;AN=56;BaseQRankSum=-6.372;DP=590;FS=9.208;HRun=14;HaplotypeScore=86.4168;InbreedingCoeff=0.7766;MQ=69.07;MQ0=6;MQRankSum=-0.473;QD=15.18;ReadPosRankSum=4.892;VQSLOD=3.4955;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,11:17:23.96:222,24,0	1/1:1,5:7:17.74:151,18,0	0/0:51,0:20:16.89:0,17,189	0/0:54,0:27:19.17:0,19,153	0/1:8,20:31:3.59:372,0,4	1/1:3,25:31:47.51:522,48,0	1/1:5,9:14:20.93:194,21,0	1/1:10,18:30:53.17:437,53,0	1/1:5,8:13:20.96:194,21,0	1/1:6,24:30:59.57:532,60,0	1/1:4,16:20:38.95:361,39,0	1/1:6,7:13:11.92:111,12,0	1/1:5,14:18:10.53:230,11,0	1/1:8,9:17:23.88:222,24,0	0/0:9,0:10:26.53:0,27,311	1/1:4,8:13:17.99:167,18,0	1/1:4,7:12:17.80:200,18,0	1/1:3,14:17:26.87:296,27,0	1/1:8,10:20:6.90:261,7,0	1/1:6,13:23:14.84:300,15,0	1/1:0,4:4:6.01:56,6,0	1/1:5,18:28:23.18:394,23,0	1/1:4,9:14:14.65:183,15,0	1/1:3,11:15:29.62:261,30,0	1/1:2,17:20:41.75:373,42,0	1/1:7,12:20:16.20:319,16,0	1/1:6,23:31:65.38:624,65,0	1/1:1,7:10:17.61:198,18,0
chr10	27582164	.	TCACACACACACACACACACACACACACACA	T	6019.93	PASS	AB=0.756;AC=19;AF=0.365;AN=52;BaseQRankSum=6.697;DP=419;FS=35.399;HRun=0;HaplotypeScore=275.5559;InbreedingCoeff=-0.3609;MQ=38.71;MQ0=29;MQRankSum=-0.786;QD=20.62;ReadPosRankSum=5.262;VQSLOD=2.2816;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:13:0.47:0,0,1	0/1:4,0:6:21.87:22,0,35	./.	./.	0/0:17,0:17:7.39:0,7,55	0/1:13,1:20:62.67:134,0,63	0/0:15,0:11:4.42:0,4,45	0/0:15,0:14:0:0,0,0	0/0:11,6:16:5.24:0,5,53	0/1:17,6:22:28.87:1024,0,29	0/1:7,6:15:0.16:0,0,0	0/1:14,5:21:15.94:197,0,16	0/1:13,6:19:69.16:673,0,69	0/1:11,4:16:38.73:195,0,39	0/0:11,0:18:8.88:0,9,329	0/1:12,0:16:3.70:794,0,4	0/1:12,6:19:38.02:537,0,38	0/1:10,3:12:74.35:221,0,74	0/1:9,0:10:20.32:344,0,20	0/1:7,2:10:18.58:164,0,19	0/0:11,0:7:0.47:0,0,1	0/1:10,2:13:31.55:32,0,34	0/1:4,0:9:0.37:1,0,0	0/1:18,0:13:13.25:13,0,30	0/0:10,1:15:6.83:0,7,38	1/1:14,4:19:6.18:892,6,0	0/1:18,0:30:72.24:400,0,72	0/1:3,0:4:99:378,0,386
chr10	27584804	.	ATT	A	6541.37	PASS	AB=0.567;AC=51;AF=0.911;AN=56;BaseQRankSum=-4.187;DP=456;FS=3.772;HRun=15;HaplotypeScore=63.2002;InbreedingCoeff=0.5680;MQ=69.42;MQ0=3;MQRankSum=-0.793;QD=15.07;ReadPosRankSum=2.887;VQSLOD=4.1227;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:4,12:17:19.95:182,0,20	1/1:0,1:1:3:26,3,0	0/0:11,0:7:14.74:0,15,127	0/0:11,0:9:2.73:0,3,96	1/1:6,18:26:46.92:379,47,0	1/1:6,13:20:32.54:276,33,0	1/1:3,7:12:14.53:162,15,0	1/1:10,10:21:10.72:245,11,0	1/1:6,5:13:14.47:155,14,0	1/1:3,22:28:31.88:516,32,0	1/1:9,16:26:41.67:369,42,0	1/1:5,7:12:14.88:132,15,0	1/1:3,10:13:29.90:264,30,0	1/1:2,6:8:17.94:158,18,0	1/1:2,1:14:30.36:144,30,0	1/1:6,10:17:32.60:273,33,0	1/1:2,13:17:32.54:320,33,0	1/1:4,8:12:23.88:211,24,0	1/1:8,10:21:10.78:278,11,0	1/1:4,19:24:44.10:411,44,0	1/1:2,8:10:20.92:185,21,0	1/1:5,9:16:23.54:240,24,0	1/1:3,9:14:23.54:241,24,0	1/1:2,11:13:29.96:264,30,0	1/1:6,14:23:18.77:355,19,0	1/1:7,13:22:29.33:294,29,0	1/1:8,15:24:38.43:328,38,0	1/1:1,5:8:11.55:135,12,0
chr10	27584956	.	AATGT	A	9551.76	PASS	AB=0.661;AC=46;AF=0.885;AN=52;BaseQRankSum=2.892;DP=586;FS=1.542;HRun=0;HaplotypeScore=111.2331;InbreedingCoeff=0.5786;MQ=74.45;MQ0=0;MQRankSum=-2.860;QD=19.82;ReadPosRankSum=0.501;VQSLOD=4.6378;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:14,12:26:36.12:559,36,0	1/1:7,5:12:12.04:187,12,0	./.	./.	0/1:10,15:25:40.80:363,0,41	1/1:11,11:23:30.10:447,30,0	1/1:2,5:7:11.97:158,12,0	1/1:29,0:29:9.01:103,9,0	1/1:10,12:22:33.06:485,33,0	1/1:11,12:23:36.10:509,36,0	1/1:10,11:21:33.10:491,33,0	1/1:6,13:19:36.12:559,36,0	1/1:13,12:25:33.04:484,33,0	1/1:8,9:17:27.09:419,27,0	1/1:11,16:27:42.07:624,42,0	0/0:25,0:25:39.13:0,39,880	0/0:28,0:28:48.16:0,48,1104	1/1:11,7:18:17.80:279,18,0	1/1:8,7:15:21.07:325,21,0	0/1:13,10:23:40.52:389,0,41	1/1:11,5:16:12.04:186,12,0	1/1:9,14:23:33.11:513,33,0	1/1:6,17:23:39.13:606,39,0	1/1:11,10:20:21.07:326,21,0	1/1:5,12:17:33.11:513,33,0	1/1:5,9:14:27.05:374,27,0	1/1:15,10:25:24.08:373,24,0	1/1:2,9:11:18.06:280,18,0
chr10	27585574	.	C	CA	16529.45	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-7.990;DP=599;FS=5.905;HRun=7;HaplotypeScore=58.3410;InbreedingCoeff=0.9535;MQ=83.69;MQ0=0;MQRankSum=-8.343;QD=29.41;ReadPosRankSum=5.992;VQSLOD=4.7994;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,23:25:66.20:797,66,0	1/1:1,9:10:27.08:326,27,0	0/0:21,0:21:36.38:0,36,387	0/0:16,0:16:36.41:0,36,309	1/1:5,21:26:69.21:829,69,0	1/1:1,23:24:63.19:758,63,0	1/1:5,21:26:57.17:689,57,0	1/1:4,24:28:72.19:845,72,0	1/1:5,18:23:54.17:651,54,0	1/1:3,15:18:45.14:544,45,0	1/1:3,24:27:43.20:788,43,0	1/1:0,12:12:33.10:398,33,0	1/1:3,20:23:57.17:689,57,0	1/1:2,19:21:48.15:580,48,0	1/1:1,16:17:42.13:507,42,0	1/1:3,22:25:57.17:689,57,0	1/1:6,28:34:78.24:942,78,0	1/1:3,7:10:6.93:203,7,0	1/1:0,17:17:51.14:605,51,0	1/1:0,22:22:60.10:692,60,0	1/1:2,24:27:72.09:848,72,0	1/1:1,14:15:39.12:471,39,0	1/1:6,15:21:45.14:544,45,0	1/1:2,13:15:36.11:435,36,0	1/1:2,24:26:66.20:797,66,0	1/1:2,23:25:69.20:815,69,0	1/1:4,26:30:69.21:834,69,0	1/1:5,10:15:21.06:254,21,0
chr10	27586782	.	C	CTTTTACGTT	2142.17	PASS	AB=0.675;AC=36;AF=0.947;AN=38;BaseQRankSum=-2.150;DP=35;FS=3.043;HRun=0;HaplotypeScore=14.5753;InbreedingCoeff=-0.2005;MQ=105.32;MQ0=0;MQRankSum=-1.169;QD=63.01;ReadPosRankSum=0.340;VQSLOD=2.7683;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,0:1:3.01:145,3,0	./.	0/1:1,1:3:11.34:256,0,11	0/1:2,0:3:20.43:133,0,20	1/1:3,0:3:6.02:98,6,0	./.	1/1:2,0:2:6.02:113,6,0	./.	1/1:0,0:1:3.01:80,3,0	1/1:2,0:3:9.01:200,9,0	./.	1/1:1,0:1:3.01:51,3,0	./.	./.	./.	1/1:1,0:1:3.01:52,3,0	./.	1/1:1,0:1:3.01:42,3,0	1/1:1,0:1:2.99:23,3,0	1/1:1,0:2:6.02:213,6,0	1/1:1,0:1:2.97:20,3,0	1/1:2,0:2:6.01:78,6,0	1/1:0,0:1:3.01:79,3,0	1/1:2,0:2:6.02:122,6,0	1/1:1,0:1:3.01:77,3,0	1/1:1,0:4:12.04:373,12,0	1/1:0,0:1:3.01:77,3,0	./.
chr10	27589595	.	AT	A	9985.72	PASS	AB=1.000;AC=53;AF=0.946;AN=56;BaseQRankSum=-5.587;DP=479;FS=20.264;HRun=10;HaplotypeScore=52.7177;InbreedingCoeff=0.6343;MQ=71.32;MQ0=0;MQRankSum=-4.551;QD=21.71;ReadPosRankSum=4.199;VQSLOD=3.7032;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,12:13:29.99:260,30,0	1/1:0,6:6:18:156,18,0	0/0:19,0:17:26.27:0,26,397	0/1:17,0:12:20.23:20,0,151	1/1:3,22:25:62.97:547,63,0	1/1:1,19:20:50.99:443,51,0	1/1:1,11:12:32.99:287,33,0	1/1:3,17:20:44.98:391,45,0	1/1:1,19:20:50.98:443,51,0	1/1:1,16:17:47.98:417,48,0	1/1:2,24:26:65.96:573,66,0	1/1:1,20:21:53.99:469,54,0	1/1:0,14:14:38.99:339,39,0	1/1:1,13:14:38.99:339,39,0	1/1:2,17:19:50.99:443,51,0	1/1:1,8:9:17.98:156,18,0	1/1:3,12:15:32.98:286,33,0	1/1:1,5:6:14.99:129,15,0	1/1:6,17:23:53.93:459,54,0	1/1:2,31:33:89.01:761,89,0	1/1:2,9:11:23.99:208,24,0	1/1:1,9:10:26.99:234,27,0	1/1:1,17:18:50.99:443,51,0	1/1:0,13:13:35.99:313,36,0	1/1:0,17:17:50.99:443,51,0	1/1:1,16:17:47.97:413,48,0	1/1:1,20:21:56.99:495,57,0	1/1:3,20:23:59.99:521,60,0
chr10	27593028	.	GA	G	453.31	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.712;DP=504;FS=2.090;HRun=6;HaplotypeScore=47.6375;InbreedingCoeff=0.8334;MQ=70.01;MQ0=0;MQRankSum=0.068;QD=22.67;ReadPosRankSum=0.650;VQSLOD=2.7001;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:54.13:0,54,691	0/0:2,0:2:6.02:0,6,79	0/0:5,0:5:7.57:0,8,68	0/0:7,0:7:20.38:0,20,196	0/0:39,0:39:99:0,111,1445	0/0:21,0:21:54.17:0,54,697	0/0:10,0:10:30.10:0,30,394	0/0:32,0:32:81.26:0,81,1065	0/0:13,0:13:33.08:0,33,405	0/0:28,0:28:72.23:0,72,947	0/0:18,0:18:48.12:0,48,589	0/0:17,0:17:48.16:0,48,630	0/0:11,0:11:33.07:0,33,402	0/0:22,0:22:63.20:0,63,826	1/1:3,17:20:51.13:548,51,0	0/0:20,0:20:54.18:0,54,711	0/0:22,0:22:63.20:0,63,828	0/0:20,0:20:54.16:0,54,692	0/0:28,0:28:72.23:0,72,935	0/0:23,0:23:69.22:0,69,908	0/0:14,0:14:39.12:0,39,499	0/0:8,0:8:24.08:0,24,316	0/0:17,0:17:51.16:0,51,657	0/0:6,0:6:18.06:0,18,237	0/0:22,0:22:63.17:0,63,798	0/0:21,0:21:63.20:0,63,829	0/0:23,0:23:69.22:0,69,907	0/0:17,0:17:51.17:0,51,671
chr10	27593302	.	G	GA	15363.35	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-7.780;DP=578;FS=4.485;HRun=7;HaplotypeScore=47.3039;InbreedingCoeff=0.8689;MQ=86.83;MQ0=0;MQRankSum=-8.437;QD=28.72;ReadPosRankSum=4.671;VQSLOD=5.2087;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,27:29:66.20:797,66,0	1/1:0,7:7:21.06:254,21,0	0/0:26,0:26:60.05:0,60,561	0/0:17,0:17:26.24:0,26,281	1/1:7,23:30:66.20:797,66,0	1/1:2,19:21:51.16:616,51,0	1/1:3,16:19:39.12:471,39,0	1/1:10,17:27:51.16:616,51,0	1/1:6,21:27:57.17:688,57,0	1/1:1,24:25:72.22:869,72,0	1/1:2,18:20:51.03:567,51,0	1/1:1,20:21:57.17:689,57,0	1/1:2,9:11:24.07:288,24,0	1/1:2,13:15:39.12:469,39,0	1/1:4,18:22:48.15:579,48,0	1/1:3,23:26:60.18:725,60,0	1/1:0,23:23:69.21:833,69,0	1/1:0,11:11:24.07:290,24,0	1/1:5,29:34:87.22:1005,87,0	1/1:5,15:20:42.13:507,42,0	1/1:2,17:19:51.16:616,51,0	1/1:0,12:12:30.09:362,30,0	1/1:3,11:14:1.12:297,1,0	1/1:2,14:16:10.15:406,10,0	1/1:2,19:21:54.17:652,54,0	1/1:6,29:35:87.25:1031,87,0	1/1:2,20:22:54.16:648,54,0	1/1:0,8:8:24.07:290,24,0
chr10	27594781	.	GA	G	269.66	PASS	AB=0.889;AC=3;AF=0.054;AN=56;BaseQRankSum=-1.283;DP=419;FS=2.072;HRun=9;HaplotypeScore=63.6112;InbreedingCoeff=0.5312;MQ=77.71;MQ0=0;MQRankSum=-0.428;QD=11.72;ReadPosRankSum=0.535;VQSLOD=2.9008;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:8:18.05:0,18,208	0/0:9,0:9:27.07:0,27,302	0/0:11,0:10:0.66:0,1,116	0/1:7,1:7:17.55:18,0,62	0/0:27,1:28:53.58:0,54,833	0/0:23,0:23:54.16:0,54,623	0/0:20,0:20:42.12:0,42,485	0/0:26,0:26:75.21:0,75,857	0/0:9,0:9:21.06:0,21,242	0/0:20,0:20:57.15:0,57,640	0/0:17,0:17:45.13:0,45,519	0/0:13,0:14:29.92:0,30,325	0/0:16,0:16:41.94:0,42,464	0/0:10,0:10:24.07:0,24,277	1/1:0,15:15:39.02:357,39,0	0/0:16,0:15:42.01:0,42,474	0/0:13,0:13:33.10:0,33,381	0/0:7,0:7:15.04:0,15,172	0/0:20,0:19:51.15:0,51,589	0/0:19,0:19:48.14:0,48,554	0/0:9,0:9:18.05:0,18,208	0/0:13,1:14:14.66:0,15,423	0/0:18,0:18:45.13:0,45,520	0/0:15,0:15:30.08:0,30,336	0/0:7,0:7:21.06:0,21,242	0/0:16,0:16:36.11:0,36,415	0/0:15,0:15:42.11:0,42,474	0/0:16,0:16:30.09:0,30,346
chr10	27594800	.	G	GT	8563.24	PASS	AB=0.716;AC=49;AF=0.875;AN=56;BaseQRankSum=-7.904;DP=448;FS=0.662;HRun=10;HaplotypeScore=47.3877;InbreedingCoeff=0.5298;MQ=72.60;MQ0=0;MQRankSum=-0.869;QD=20.58;ReadPosRankSum=2.403;VQSLOD=5.5674;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,7:8:8.33:208,8,0	1/1:0,9:9:24.06:256,24,0	0/1:6,0:5:1.93:2,0,35	0/0:10,0:9:14.28:0,14,99	1/1:6,21:28:59.85:579,60,0	1/1:7,19:26:1.84:431,2,0	1/1:1,16:17:14.46:359,14,0	1/1:10,21:33:41.34:616,41,0	1/1:0,12:12:30.08:320,30,0	1/1:6,18:24:29.48:514,29,0	1/1:2,15:17:39.06:404,39,0	0/1:4,12:16:11.73:197,0,12	1/1:4,15:19:17.46:391,17,0	1/1:1,12:13:33.08:352,33,0	0/0:21,0:22:43.94:0,44,348	1/1:4,13:19:41.81:413,42,0	1/1:3,11:14:36.07:375,36,0	1/1:2,2:5:2.17:58,2,0	1/1:5,12:17:41.93:423,42,0	1/1:2,16:18:35.94:336,36,0	1/1:1,7:10:20.89:206,21,0	1/1:5,9:15:20.89:206,21,0	1/1:4,15:19:41.68:410,42,0	1/1:0,12:12:30.08:320,30,0	1/1:1,5:6:15.04:160,15,0	1/1:3,16:20:29.30:485,29,0	0/1:5,14:19:1.16:400,0,1	1/1:4,6:11:14.87:142,15,0
chr10	27596350	.	ATG	A	344.14	PASS	AB=0.911;AC=14;AF=0.269;AN=52;BaseQRankSum=4.892;DP=605;FS=7.026;HRun=0;HaplotypeScore=78.7049;InbreedingCoeff=-0.0980;MQ=57.68;MQ0=17;MQRankSum=-0.290;QD=1.28;ReadPosRankSum=-0.439;VQSLOD=0.8188;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:35,1:36:69.83:70,0,127	0/1:7,1:8:23.49:23,0,80	./.	./.	0/0:16,0:16:6.22:0,6,262	0/1:21,2:23:40.96:41,0,237	1/1:13,9:22:17.09:151,17,0	0/0:30,0:27:8.92:0,9,81	0/0:21,0:21:24.04:0,24,331	0/1:15,2:17:22.76:23,0,155	0/0:16,0:15:6.01:0,6,86	0/1:24,1:25:46.22:46,0,139	0/0:20,0:20:21.84:0,22,259	0/0:16,0:15:6:0,6,67	1/1:10,0:20:11.36:56,11,0	0/0:20,6:26:0.19:0,0,337	0/0:31,0:31:11.10:0,11,460	0/1:13,4:15:14.51:15,0,180	0/0:19,0:16:7.27:0,7,92	0/1:12,0:12:8.43:8,0,257	0/1:30,2:29:40.19:40,0,236	0/0:21,0:20:3.64:0,4,284	0/0:15,0:15:24.06:0,24,322	0/1:17,2:18:11.47:11,0,293	0/0:29,0:29:0.49:0,0,255	0/0:22,0:22:23.41:0,23,263	0/1:27,5:32:8.78:9,0,245	0/0:8,0:7:6:0,6,67
chr10	27596509	.	CTGTGTGTGTGTGTG	C	14006.37	PASS	AB=0.815;AC=45;AF=0.833;AN=54;BaseQRankSum=1.831;DP=555;FS=0.000;HRun=0;HaplotypeScore=215.0337;InbreedingCoeff=0.6285;MQ=61.90;MQ0=9;MQRankSum=-0.300;QD=29.99;ReadPosRankSum=2.107;VQSLOD=3.4738;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,2:13:8.82:250,9,0	1/1:3,5:8:9.03:355,9,0	0/0:22,0:15:3.01:0,3,130	0/0:21,0:19:9.03:0,9,245	1/1:16,9:27:18.06:668,18,0	1/1:14,10:25:30.10:1117,30,0	1/1:10,10:20:8.39:354,8,0	1/1:14,0:14:5.60:90,6,0	1/1:16,10:28:27.09:996,27,0	1/1:18,8:27:27.09:894,27,0	1/1:7,5:12:9.03:334,9,0	1/1:16,10:28:27.09:983,27,0	1/1:9,10:19:27.09:1064,27,0	./.	0/0:17,0:23:14.81:0,15,908	1/1:4,10:15:21.07:763,21,0	0/1:17,5:22:99:112,0,109	0/0:10,0:10:7.82:0,8,203	1/1:10,3:11:9:258,9,0	1/1:9,15:23:30.10:1149,30,0	1/1:18,10:28:3.01:118,3,0	1/1:11,11:23:12.04:452,12,0	1/1:14,10:24:24.08:890,24,0	1/1:12,9:20:15.05:542,15,0	1/1:6,8:15:18.06:689,18,0	1/1:17,5:22:18.04:522,18,0	1/1:13,9:23:27.09:994,27,0	1/1:7,1:12:12.04:412,12,0
chr10	27597490	.	ATTGTC	A	1184.83	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.443;DP=755;FS=0.859;HRun=0;HaplotypeScore=143.0420;InbreedingCoeff=0.9693;MQ=87.00;MQ0=0;MQRankSum=-2.475;QD=49.37;ReadPosRankSum=3.569;VQSLOD=4.1501;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,147,4561	0/0:13,0:13:36.12:0,36,1123	0/0:27,0:27:72.23:0,72,2126	0/0:25,0:25:65.98:0,66,1893	0/0:45,0:45:99:0,133,4081	0/0:31,0:31:93.32:0,93,2997	0/0:22,0:22:66.23:0,66,2109	0/0:43,0:43:99:0,129,3940	0/0:20,0:20:60.21:0,60,1841	0/0:27,0:27:81.28:0,81,2512	0/0:26,0:26:78.27:0,78,2321	0/0:19,0:19:57.20:0,57,1737	0/0:32,0:32:96.33:0,96,3056	0/0:32,0:32:96.33:0,96,3077	1/1:0,24:24:60.20:1280,60,0	0/0:25,0:25:75.25:0,75,2195	0/0:19,0:19:54.19:0,54,1677	0/0:10,0:10:27.09:0,27,872	0/0:30,0:30:87.26:0,87,2439	0/0:34,0:34:99:0,99,2886	0/0:28,0:28:82.16:0,82,2599	0/0:22,0:22:66.23:0,66,2047	0/0:27,0:27:78.27:0,78,2248	0/0:30,0:30:84.29:0,84,2637	0/0:31,0:31:93.32:0,93,2908	0/0:31,0:31:93.32:0,93,2925	0/0:29,0:29:87.30:0,87,2751	0/0:4,0:4:12.04:0,12,387
chr10	27598255	.	TTC	T	919.81	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-3.177;DP=594;FS=0.696;HRun=0;HaplotypeScore=113.1337;InbreedingCoeff=0.8493;MQ=76.13;MQ0=0;MQRankSum=-3.280;QD=30.66;ReadPosRankSum=-0.732;VQSLOD=5.3465;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,106,692	0/0:11,0:11:29.59:0,30,193	0/0:19,0:19:24.87:0,25,609	0/0:16,0:14:40.55:0,41,487	0/0:28,0:28:43.85:0,44,463	0/0:28,0:28:66.25:0,66,463	0/0:14,0:14:35.52:0,36,236	0/0:33,0:33:76.36:0,76,819	0/0:22,0:22:61.29:0,61,385	0/0:24,0:24:68.31:0,68,451	0/0:20,0:20:54.95:0,55,373	0/0:17,0:17:41.52:0,42,305	0/0:24,0:24:55.74:0,56,349	0/0:20,0:20:55.91:0,56,374	1/1:0,30:30:63.08:1015,63,0	0/0:23,0:23:65.09:0,65,431	0/0:13,0:13:29.60:0,30,210	0/0:13,0:13:32.51:0,33,208	0/0:26,0:26:74.06:0,74,523	0/0:31,0:31:54.38:0,54,497	0/0:13,0:13:34.78:0,35,220	0/0:23,0:23:45.79:0,46,404	0/0:20,0:20:43.89:0,44,286	0/0:24,0:24:67.96:0,68,433	0/0:13,0:13:38.46:0,38,257	0/0:22,0:22:62.23:0,62,448	0/0:24,0:24:62.68:0,63,434	0/0:1,0:1:2.96:0,3,19
chr10	27598256	.	TC	T	10625.79	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-5.890;DP=588;FS=0.000;HRun=10;HaplotypeScore=67.2228;InbreedingCoeff=0.8214;MQ=76.28;MQ0=0;MQRankSum=-4.375;QD=19.21;ReadPosRankSum=4.871;VQSLOD=5.3430;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,36:42:92.98:807,93,0	1/1:1,10:11:26.99:234,27,0	0/0:18,1:19:3.35:0,3,220	0/0:15,0:14:20.70:0,21,203	1/1:1,27:28:74.89:637,75,0	1/1:2,25:28:68.01:579,68,0	1/1:3,11:14:26.99:234,27,0	1/1:13,19:32:50.85:431,51,0	1/1:3,19:22:56.98:495,57,0	1/1:4,20:24:62.92:538,63,0	1/1:4,16:20:41.98:364,42,0	1/1:3,14:17:32.72:272,33,0	1/1:3,21:24:56.98:493,57,0	1/1:2,18:20:50.97:442,51,0	1/1:30,0:30:54.32:202,54,0	1/1:3,20:23:56.99:495,57,0	1/1:1,12:13:26.98:234,27,0	1/1:1,12:13:29.99:260,30,0	1/1:5,19:24:53.96:464,54,0	1/1:3,26:31:73:602,73,0	1/1:2,11:13:32.99:286,33,0	1/1:4,18:22:51.83:458,52,0	1/1:2,18:20:38.71:338,39,0	1/1:1,23:24:65.99:573,66,0	1/1:1,11:12:32.99:286,33,0	1/1:4,18:22:47.96:415,48,0	1/1:3,20:23:53.93:462,54,0	1/1:0,1:1:3:26,3,0
chr10	27599493	.	CACATGTAT	C	17426.57	PASS	AB=0.782;AC=43;AF=0.768;AN=56;BaseQRankSum=11.069;DP=673;FS=55.926;HRun=0;HaplotypeScore=208.4457;InbreedingCoeff=0.3021;MQ=56.74;MQ0=0;MQRankSum=-13.126;QD=29.49;ReadPosRankSum=5.830;VQSLOD=2.1682;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,8:18:21.61:568,22,0	1/1:4,2:6:5.49:151,5,0	0/0:18,0:16:35.37:0,35,772	0/0:16,0:9:13.33:0,13,490	1/1:8,19:27:45.69:1003,46,0	1/1:11,21:32:27.90:1124,28,0	0/1:12,9:21:16.06:340,0,16	0/1:21,0:21:39.48:105,0,39	1/1:5,21:26:32.38:865,32,0	1/1:9,23:32:38.65:1255,39,0	1/1:12,12:24:8.70:442,9,0	1/1:13,18:31:19.03:628,19,0	0/1:30,0:30:2.43:174,0,2	1/1:6,17:23:27.64:737,28,0	0/0:16,0:48:79.47:0,79,414	1/1:10,34:45:69.93:2021,70,0	0/1:11,16:27:6.46:333,0,6	0/1:3,5:8:5.25:277,0,5	1/1:7,7:14:0.40:382,0,0	1/1:3,21:24:50.62:1082,51,0	0/1:9,1:10:0.74:66,0,1	1/1:10,19:29:25.65:1157,26,0	1/1:7,15:22:29.02:718,29,0	1/1:1,11:12:1.72:4,2,0	1/1:5,17:24:41.20:937,41,0	0/1:12,19:31:11.24:1121,0,11	1/1:12,23:36:40.87:1511,41,0	1/1:4,14:18:5.19:423,5,0
chr10	27599495	.	CATGTATGT	C	18484.80	PASS	AB=1.000;AC=49;AF=0.875;AN=56;BaseQRankSum=-3.939;DP=669;FS=3.254;HRun=0;HaplotypeScore=204.1256;InbreedingCoeff=0.6647;MQ=56.60;MQ0=0;MQRankSum=-5.674;QD=31.60;ReadPosRankSum=-0.288;VQSLOD=4.6643;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:19:24.08:568,24,0	1/1:6,0:6:6.02:152,6,0	0/0:19,0:16:7.37:0,7,93	0/0:17,0:9:13.26:0,13,231	1/1:26,0:26:51.17:1058,51,0	1/1:32,0:32:48.16:1208,48,0	1/1:21,0:21:15.05:374,15,0	1/1:19,0:19:9.02:138,9,0	1/1:26,0:26:36.12:908,36,0	1/1:31,0:31:57.19:1355,57,0	1/1:23,0:23:24.08:488,24,0	1/1:31,0:31:27.09:683,27,0	1/1:13,15:29:9.03:219,9,0	1/1:23,0:23:30.10:757,30,0	0/0:48,0:48:70.64:0,71,596	1/1:45,0:45:84.29:2100,84,0	1/1:27,0:27:15:369,15,0	1/1:8,0:8:2.95:292,3,0	1/1:14,0:14:21.07:456,21,0	1/1:24,0:24:51.17:1094,51,0	1/1:9,0:9:3.01:76,3,0	1/1:29,0:29:51.17:1243,51,0	1/1:22,0:22:30.05:744,30,0	1/1:12,0:12:1.25:3,1,0	1/1:24,0:24:41.73:972,42,0	0/1:31,0:31:3.32:1213,0,3	1/1:35,0:36:41.48:1559,41,0	1/1:18,0:18:18.06:456,18,0
chr10	27599876	.	A	AGTGTGTGTGTGTGT	12818.60	PASS	AC=48;AF=0.923;AN=52;BaseQRankSum=0.158;DP=640;FS=1.155;HRun=0;HaplotypeScore=274.2591;InbreedingCoeff=0.5533;MQ=62.99;MQ0=15;MQRankSum=-2.436;QD=25.09;ReadPosRankSum=3.383;VQSLOD=3.4361;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:32,0:31:17.85:491,18,0	./.	0/0:61,0:21:17.54:0,18,303	0/0:52,0:32:16.78:0,17,400	1/1:21,0:22:2.94:18,3,0	1/1:35,0:33:15.85:848,16,0	1/1:28,0:28:18.04:636,18,0	1/1:35,0:31:38.93:1072,39,0	1/1:14,0:14:9.01:183,9,0	1/1:23,0:23:27.09:1408,27,0	1/1:13,0:12:8.99:186,9,0	1/1:19,0:22:8.97:537,9,0	1/1:18,0:18:12.04:469,12,0	1/1:26,0:25:18.03:354,18,0	1/1:21,6:27:18.06:1060,18,0	1/1:18,0:17:12.04:731,12,0	1/1:20,0:21:18.06:1046,18,0	1/1:4,0:4:9.03:538,9,0	1/1:15,0:15:11.53:585,12,0	1/1:15,0:15:6.02:98,6,0	1/1:21,0:19:7.49:53,7,0	1/1:15,0:15:2.64:182,3,0	./.	1/1:16,0:20:1.77:6,2,0	1/1:22,0:21:5.09:93,5,0	1/1:28,0:27:38.90:1694,39,0	1/1:16,0:21:6.02:259,6,0	1/1:15,0:13:10.59:273,11,0
chr10	27601185	.	C	CGTGTGTGTGTGT	4812.72	PASS	AB=1.000;AC=38;AF=0.950;AN=40;DP=507;FS=0.000;HRun=0;HaplotypeScore=185.5778;InbreedingCoeff=0.1632;MQ=53.45;MQ0=8;QD=11.40;VQSLOD=3.6040;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:21:7.27:225,7,0	./.	./.	./.	0/1:4,0:4:0:1,0,0	1/1:16,0:16:5.89:169,6,0	1/1:38,0:38:15.52:309,16,0	1/1:12,0:12:12.04:336,12,0	./.	1/1:18,0:18:22.63:731,23,0	./.	1/1:30,0:28:2.88:88,3,0	1/1:24,0:24:15.48:490,15,0	1/1:24,0:24:8.90:215,9,0	./.	1/1:17,0:17:3.41:19,3,0	1/1:23,0:23:12.03:219,12,0	1/1:20,0:20:24.08:750,24,0	1/1:17,0:15:12.03:311,12,0	./.	1/1:61,0:58:2.98:57,3,0	1/1:8,0:7:3.01:80,3,0	0/1:13,0:14:0:1,0,0	1/1:35,0:34:3.82:48,4,0	1/1:7,0:7:3.01:56,3,0	1/1:18,0:18:12.93:252,13,0	1/1:11,0:11:12.04:457,12,0	./.
chr10	27601251	.	AGTGTGTGT	A	1225.65	PASS	AB=0.835;AC=20;AF=0.400;AN=50;BaseQRankSum=-0.436;DP=381;FS=0.000;HRun=0;HaplotypeScore=106.8766;InbreedingCoeff=0.0358;MQ=41.75;MQ0=18;MQRankSum=0.405;QD=4.77;ReadPosRankSum=4.614;VQSLOD=1.3553;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:8:0:0,0,0	./.	0/0:27,0:7:0.15:0,0,1	0/0:30,0:6:3.01:0,3,73	0/0:2,0:2:0:0,0,0	1/1:12,1:12:2.25:75,2,0	0/1:33,4:37:9.46:40,0,9	0/0:6,0:5:9.03:0,9,151	1/1:5,3:8:3.01:76,3,0	0/0:11,0:9:12.04:0,12,171	0/0:4,0:3:3.01:0,3,33	1/1:12,5:16:6.36:152,6,0	0/1:9,3:13:12.61:185,0,13	0/0:11,2:11:3.01:0,3,54	0/1:5,0:8:16.26:22,0,16	1/1:3,1:3:2.63:75,3,0	0/0:12,1:13:4.95:0,5,98	0/1:13,3:16:47.01:142,0,47	0/1:10,2:11:19.33:142,0,19	./.	0/1:55,4:58:1.14:10,0,1	0/1:10,0:9:0:0,0,1	1/1:4,0:4:3.01:45,3,0	0/1:23,4:26:0.16:0,0,1	0/0:4,0:3:0:0,0,0	0/1:10,2:11:99:130,0,219	0/1:6,3:9:2.64:255,0,3	./.
chr10	27601684	.	G	GAC	2950.69	PASS	AB=0.728;AC=34;AF=0.654;AN=52;BaseQRankSum=-3.452;DP=333;FS=1.100;HRun=0;HaplotypeScore=90.5698;InbreedingCoeff=-0.2679;MQ=45.40;MQ0=3;MQRankSum=0.019;QD=9.77;ReadPosRankSum=-0.523;VQSLOD=3.4004;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:4,18:23:11.88:249,0,12	0/1:2,1:3:27.03:39,0,27	./.	0/1:11,0:7:0:0,0,0	0/1:8,4:12:24.03:81,0,24	0/1:8,8:16:21.01:123,0,21	1/1:13,2:16:6.22:172,6,0	1/1:14,0:14:11.95:113,12,0	0/1:7,8:15:0.98:262,0,1	1/1:8,2:10:6.02:90,6,0	0/1:12,4:17:46.01:117,0,46	1/1:3,0:3:2.92:17,3,0	1/1:10,5:15:9.03:135,9,0	0/0:10,0:10:6.01:0,6,66	1/1:9,0:8:3:26,3,0	0/1:3,8:11:45.22:204,0,45	1/1:15,6:21:3.56:294,4,0	0/1:5,6:14:12:230,0,12	1/1:8,2:11:6.02:90,6,0	1/1:5,1:8:6.01:71,6,0	0/1:9,7:18:21.03:104,0,21	0/1:4,1:5:27.04:39,0,27	1/1:4,3:7:9.03:135,9,0	0/1:7,7:14:14.99:207,0,15	0/0:7,2:9:3.01:0,3,33	0/1:12,0:12:12.65:62,0,13	0/1:8,8:16:33.35:234,0,33	./.
chr10	27603580	.	TG	T	6307.97	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-6.672;DP=509;FS=30.294;HRun=1;HaplotypeScore=83.0154;InbreedingCoeff=0.8680;MQ=56.09;MQ0=3;MQRankSum=5.886;QD=13.80;ReadPosRankSum=-2.718;VQSLOD=2.0363;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:22,2:24:26.60:179,27,0	1/1:6,0:6:9.83:63,10,0	0/0:32,2:16:23.15:0,23,259	0/0:17,0:8:14.10:0,14,139	1/1:20,3:21:37.47:276,37,0	1/1:24,0:24:48.15:308,48,0	1/1:15,4:19:37.11:324,37,0	1/1:25,0:23:31.71:298,32,0	1/1:17,1:18:20.94:197,21,0	1/1:11,1:12:29.46:207,29,0	1/1:20,1:21:43.26:341,43,0	1/1:16,0:15:12.60:145,13,0	1/1:11,3:14:30.97:214,31,0	1/1:9,1:9:17.47:172,17,0	1/1:6,8:14:35.71:436,36,0	1/1:11,1:12:15.02:196,15,0	1/1:17,0:16:7:98,7,0	1/1:16,1:16:29.51:237,30,0	1/1:15,0:15:14.59:213,15,0	1/1:21,2:23:38.40:321,38,0	1/1:11,1:12:24.64:172,25,0	1/1:1,21:22:47.50:475,48,0	1/1:17,2:19:25.96:271,26,0	1/1:19,0:19:32.08:204,32,0	1/1:24,2:26:49.59:321,50,0	1/1:19,2:21:38.08:324,38,0	1/1:14,1:15:10.94:121,11,0	1/1:11,2:13:20.64:194,21,0
chr10	27603826	.	AAAGG	A	53.22	PASS	AB=0.914;AC=3;AF=0.054;AN=56;BaseQRankSum=6.755;DP=659;FS=5.215;HRun=0;HaplotypeScore=125.6205;InbreedingCoeff=-0.0564;MQ=59.74;MQ0=4;MQRankSum=-4.578;QD=0.93;ReadPosRankSum=-6.914;VQSLOD=-0.2049;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:35:30.10:0,30,534	0/0:13,0:13:17.23:0,17,609	0/0:11,0:9:24.06:0,24,476	0/0:7,0:6:11.53:0,12,239	0/0:29,0:27:59.19:0,59,1038	0/0:23,0:23:33.02:0,33,496	0/0:27,0:27:72.04:0,72,1347	0/0:26,0:26:77.98:0,78,1254	0/0:29,0:29:35.91:0,36,468	0/0:20,0:19:34.88:0,35,1041	0/0:29,0:29:72.14:0,72,1631	0/0:25,0:25:32.08:0,32,596	0/0:33,0:33:39.26:0,39,545	0/0:34,0:34:42.52:0,43,737	0/0:28,0:28:22.12:0,22,1335	0/0:24,0:24:27.02:0,27,561	0/0:26,0:26:23.91:0,24,369	0/0:18,0:18:12.94:0,13,222	0/1:20,0:18:58.64:59,0,476	0/0:24,0:24:30.03:0,30,1231	0/1:17,0:17:6.68:7,0,660	0/0:24,0:24:50.52:0,51,982	0/0:18,0:18:19.04:0,19,459	0/0:26,0:26:33.17:0,33,565	0/0:26,0:26:28.36:0,28,1190	0/0:24,2:26:57.23:0,57,1472	0/0:18,2:20:45.85:0,46,1134	0/1:13,7:19:82.09:82,0,334
chr10	27603846	.	G	GAAGGAAGA	7963.83	PASS	AB=0.981;AC=28;AF=0.519;AN=54;BaseQRankSum=6.992;DP=666;FS=3.869;HRun=0;HaplotypeScore=134.2198;InbreedingCoeff=-0.6801;MQ=53.64;MQ0=2;MQRankSum=-1.345;QD=12.42;ReadPosRankSum=5.738;VQSLOD=3.4426;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:38,0:37:11.98:41,0,12	1/1:7,0:7:18.01:274,18,0	./.	0/0:3,0:2:3:0,3,27	0/1:34,0:32:14.45:221,0,14	0/0:19,0:19:3:0,3,27	0/1:22,0:22:10.87:217,0,11	0/1:33,0:32:33.73:256,0,34	0/1:25,0:25:34.95:191,0,35	0/1:23,0:23:41.35:401,0,41	0/1:28,0:28:53.54:207,0,54	0/1:23,0:23:17.83:89,0,18	0/1:33,0:33:33.93:398,0,34	0/1:30,0:30:86.92:163,0,87	0/1:28,0:28:48.79:673,0,49	0/1:28,0:28:66.95:94,0,67	0/1:28,0:28:38.96:99,0,39	0/1:21,0:21:33.24:111,0,33	0/1:29,0:27:30.30:746,0,30	1/1:25,0:25:9.75:795,10,0	0/1:19,0:19:37.50:177,0,38	0/1:27,0:27:11.92:519,0,12	0/1:19,0:19:69.66:144,0,70	0/1:9,20:30:73.55:165,0,74	0/1:27,0:27:49.04:843,0,49	0/1:24,0:24:23.31:429,0,23	0/1:20,0:20:27.69:366,0,28	1/1:20,0:19:11.63:342,12,0
chr10	27603850	.	G	GAAGAAAGA	14773.48	PASS	AB=0.878;AC=46;AF=0.920;AN=50;BaseQRankSum=-3.789;DP=698;FS=4.173;HRun=0;HaplotypeScore=117.1457;InbreedingCoeff=-0.1213;MQ=54.41;MQ0=1;MQRankSum=2.694;QD=21.95;ReadPosRankSum=-1.695;VQSLOD=3.9588;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:3,35:39:6.02:132,6,0	1/1:7,0:7:18.06:424,18,0	./.	./.	1/1:6,29:36:36.11:510,36,0	./.	1/1:21,0:21:48.11:626,48,0	1/1:33,0:32:68.92:790,69,0	1/1:3,21:28:6.02:245,6,0	1/1:4,22:28:50.92:849,51,0	1/1:6,23:30:42.09:525,42,0	1/1:5,15:24:3.01:112,3,0	1/1:5,26:35:12.04:474,12,0	1/1:7,21:30:6.02:215,6,0	1/1:27,0:27:54.16:1142,54,0	1/1:6,23:29:3.01:127,3,0	1/1:4,28:35:3.01:126,3,0	0/1:4,18:24:34.12:156,0,34	1/1:25,0:24:56.88:1222,57,0	1/1:29,0:29:69.18:1393,69,0	0/1:18,0:18:2.20:402,0,2	1/1:3,26:30:53.95:939,54,0	1/1:4,15:20:6.02:202,6,0	0/1:29,1:30:27.64:266,0,28	1/1:26,0:26:54.17:1269,54,0	1/1:26,0:26:63.18:1055,63,0	0/1:20,0:20:10.10:770,0,10	1/1:21,0:20:53.49:802,53,0
chr10	27604485	.	T	TCC	2148.39	PASS	AB=1.000;AC=49;AF=0.942;AN=52;BaseQRankSum=-1.105;DP=114;FS=11.875;HRun=3;HaplotypeScore=77.1666;InbreedingCoeff=0.1229;MQ=50.38;MQ0=0;MQRankSum=-0.785;QD=19.35;ReadPosRankSum=0.849;VQSLOD=0.2371;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:9,0:9:18.04:198,18,0	1/1:1,0:1:2.98:21,3,0	1/1:2,0:2:2.74:12,3,0	0/0:1,0:1:1.55:0,2,4	1/1:9,0:8:6:73,6,0	1/1:6,1:7:12.02:123,12,0	1/1:6,0:6:14.99:149,15,0	1/1:3,0:3:1.55:4,2,0	1/1:7,0:7:17.81:170,18,0	1/1:3,0:3:9.02:103,9,0	1/1:4,2:5:15.04:177,15,0	1/1:1,0:1:3:27,3,0	1/1:5,1:6:18.03:214,18,0	1/1:3,0:3:9.03:102,9,0	1/1:6,0:5:15.04:160,15,0	1/1:2,0:2:6.02:84,6,0	1/1:4,0:4:11.97:107,12,0	0/1:5,0:4:3.24:35,0,3	1/1:4,0:4:12.01:112,12,0	./.	1/1:3,1:3:3.01:35,3,0	1/1:4,2:6:8.99:79,9,0	1/1:4,0:4:4.78:25,5,0	1/1:3,1:4:6.01:61,6,0	./.	1/1:4,0:4:8.68:64,9,0	1/1:0,1:1:3.01:31,3,0	1/1:3,0:3:6.01:65,6,0
chr10	27607974	.	G	GGTGTGTGTGTGTGT	14623.13	PASS	AB=0.929;AC=51;AF=0.944;AN=54;BaseQRankSum=-1.583;DP=729;FS=4.260;HRun=0;HaplotypeScore=310.7209;InbreedingCoeff=0.3263;MQ=62.78;MQ0=3;MQRankSum=-0.663;QD=22.19;ReadPosRankSum=1.070;VQSLOD=3.2598;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:36,1:38:13.43:280,13,0	1/1:5,0:11:6.02:376,6,0	0/0:33,0:23:2.99:0,3,25	./.	1/1:23,0:23:2.89:25,3,0	1/1:25,0:24:28.29:990,28,0	1/1:33,0:32:18.41:624,18,0	1/1:39,0:39:44.58:1190,45,0	1/1:30,0:30:27:687,27,0	1/1:30,0:30:40.69:1625,41,0	1/1:18,0:18:5.49:188,5,0	1/1:19,5:23:16.53:636,17,0	1/1:19,0:19:15.52:452,16,0	1/1:24,4:30:12.40:687,12,0	1/1:20,0:30:7.82:286,8,0	1/1:23,1:24:2.79:200,3,0	1/1:24,0:25:8.06:183,8,0	1/1:12,1:13:18.03:644,18,0	1/1:24,0:23:25.90:1310,26,0	0/1:24,1:26:0:1,0,0	1/1:31,2:36:1.71:5,2,0	1/1:28,0:27:14.72:324,15,0	1/1:23,0:22:5.75:313,6,0	1/1:22,0:23:9.01:210,9,0	1/1:14,1:23:10.71:416,11,0	1/1:30,0:30:45.15:2262,45,0	1/1:17,3:22:12.93:668,13,0	1/1:8,0:7:3.01:44,3,0
chr10	27610133	.	CGTGT	C	4204.03	PASS	AC=46;AF=0.958;AN=48;BaseQRankSum=-2.632;DP=219;FS=0.000;HRun=0;HaplotypeScore=62.3766;InbreedingCoeff=0.2896;MQ=32.23;MQ0=5;MQRankSum=-0.442;QD=20.81;ReadPosRankSum=2.022;VQSLOD=3.2687;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,2:6:6.02:92,6,0	1/1:1,3:4:9.03:136,9,0	./.	./.	1/1:2,7:9:9.03:142,9,0	1/1:3,13:18:35.07:535,35,0	1/1:7,3:10:9.03:134,9,0	1/1:3,1:3:3.01:47,3,0	1/1:7,9:16:21.05:318,21,0	1/1:7,2:9:6.02:95,6,0	1/1:1,4:5:9.03:139,9,0	1/1:2,2:4:9.03:134,9,0	1/1:5,8:13:24.08:362,24,0	1/1:5,3:8:9.03:134,9,0	0/0:10,0:10:6.02:0,6,103	1/1:2,5:7:12.04:181,12,0	1/1:6,4:9:9.03:140,9,0	./.	1/1:5,2:6:6.02:95,6,0	1/1:5,2:7:6.02:92,6,0	./.	1/1:6,6:11:15.05:229,15,0	1/1:3,4:7:12.04:184,12,0	1/1:4,5:9:2.83:44,3,0	1/1:6,6:12:17.85:273,18,0	1/1:6,8:13:27.09:421,27,0	1/1:5,3:7:11.86:183,12,0	1/1:0,2:2:6.02:95,6,0
chr10	27610726	.	GCT	G	210.60	PASS	AB=0.933;AC=15;AF=0.288;AN=52;BaseQRankSum=2.674;DP=536;FS=25.156;HRun=0;HaplotypeScore=71.8284;InbreedingCoeff=0.1142;MQ=65.53;MQ0=14;MQRankSum=0.067;QD=1.14;ReadPosRankSum=2.942;VQSLOD=-0.0142;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:3.01:0,3,41	0/0:10,0:10:6.01:0,6,68	./.	0/0:38,0:19:0:0,0,0	0/0:22,0:21:8.97:0,9,71	0/0:28,0:28:9.28:0,9,60	0/0:14,0:14:15.05:0,15,209	./.	0/0:12,0:14:6.01:0,6,69	0/1:31,1:32:16.98:17,0,110	0/1:18,0:21:5.23:5,0,27	1/1:8,2:10:3.01:32,3,0	1/1:12,1:13:5.99:55,6,0	1/1:8,1:9:5.58:46,6,0	0/0:19,0:19:21.03:0,21,266	0/1:18,0:18:25.22:25,0,55	0/1:14,3:16:33.99:34,0,53	0/1:9,0:9:16.47:16,0,36	0/0:15,0:14:1.78:0,2,39	0/0:23,0:23:5.95:0,6,42	0/0:9,0:9:3.01:0,3,44	1/1:13,0:14:8.81:59,9,0	0/0:15,0:14:5.94:0,6,41	0/1:12,3:14:12.68:55,0,13	0/1:27,0:27:13.03:13,0,61	0/0:15,0:15:9:0,9,105	0/0:15,0:14:9.48:0,9,89	0/0:25,0:23:17.97:0,18,191
chr10	27611356	.	GA	G	9517.40	PASS	AB=1.000;AC=51;AF=0.911;AN=56;BaseQRankSum=2.239;DP=446;FS=0.000;HRun=9;HaplotypeScore=47.3991;InbreedingCoeff=0.7371;MQ=71.62;MQ0=0;MQRankSum=-0.276;QD=22.71;ReadPosRankSum=1.070;VQSLOD=5.3385;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,13:15:36.02:330,36,0	1/1:0,8:8:15.01:137,15,0	0/1:8,0:9:12.67:13,0,73	0/0:7,0:7:17.72:0,18,176	1/1:2,27:29:78.03:714,78,0	1/1:2,16:18:48.02:439,48,0	1/1:2,12:14:36.02:330,36,0	1/1:3,29:32:83.99:750,84,0	1/1:0,16:16:45.02:412,45,0	1/1:1,23:24:69.04:631,69,0	1/1:2,16:18:39.02:356,39,0	1/1:1,9:10:27.01:247,27,0	1/1:2,12:14:36.02:330,36,0	1/1:0,19:19:48.03:439,48,0	0/0:20,0:20:57.17:0,57,658	1/1:1,15:16:39.02:357,39,0	1/1:4,14:18:42.02:384,42,0	1/1:0,8:8:21.01:192,21,0	1/1:2,11:14:35.04:305,35,0	1/1:2,23:25:63.03:576,63,0	1/1:0,6:6:15.01:137,15,0	1/1:2,6:8:18.01:163,18,0	1/1:1,20:21:57.03:522,57,0	1/1:0,3:3:6:55,6,0	1/1:4,19:23:57.03:522,57,0	1/1:2,18:20:54.01:490,54,0	1/1:0,25:25:57.03:522,57,0	1/1:0,6:6:18.01:165,18,0
chr10	27611889	.	T	TG	1505.92	PASS	AB=0.795;AC=34;AF=0.607;AN=56;BaseQRankSum=-1.464;DP=479;FS=0.752;HRun=10;HaplotypeScore=100.3429;InbreedingCoeff=-0.3457;MQ=48.95;MQ0=18;MQRankSum=-1.113;QD=3.34;ReadPosRankSum=1.177;VQSLOD=0.3903;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:23,4:26:20.09:20,0,58	0/1:4,0:4:0:0,0,0	0/0:13,0:3:8.36:0,8,57	0/0:13,0:4:5.90:0,6,49	0/1:17,5:22:9.72:84,0,10	1/1:8,6:15:8.49:122,8,0	0/1:10,4:15:47.29:47,0,63	1/1:15,3:15:9.95:90,10,0	1/1:4,5:9:6.02:64,6,0	0/1:11,4:14:15.67:35,0,16	0/1:13,4:17:14.67:54,0,15	0/1:16,0:17:19.64:32,0,20	0/1:11,10:22:41.02:50,0,41	1/1:9,6:14:9.01:90,9,0	0/1:6,9:15:30.52:69,0,31	0/1:6,7:13:15.59:55,0,16	0/1:20,12:30:28.28:127,0,28	1/1:12,8:17:12.03:128,12,0	0/1:15,3:17:59.65:76,0,60	0/1:17,3:20:33.85:66,0,34	0/1:19,7:21:18.54:26,0,19	0/1:11,10:21:32.06:136,0,32	0/1:13,4:16:19.98:20,0,62	1/1:11,9:20:2.90:32,3,0	0/1:12,2:14:0:0,0,0	1/1:10,3:13:6.02:64,6,0	0/1:8,10:18:29.19:140,0,29	1/1:1,4:4:3.01:32,3,0
chr10	27613098	.	ATG	A	717.61	PASS	AB=0.959;AC=22;AF=0.393;AN=56;BaseQRankSum=-0.132;DP=493;FS=13.623;HRun=0;HaplotypeScore=96.6466;InbreedingCoeff=-0.4917;MQ=63.05;MQ0=21;MQRankSum=0.633;QD=1.99;ReadPosRankSum=-4.162;VQSLOD=-0.4549;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:22:0.44:0,0,187	0/0:6,0:6:3.01:0,3,30	0/0:30,0:11:0.47:0,0,1	0/0:41,0:13:5.75:0,6,50	0/1:22,0:22:60:60,0,275	0/1:16,0:16:8.85:9,0,167	0/0:12,0:12:17.95:0,18,154	0/1:20,0:18:31.63:40,0,32	0/1:7,0:8:5.44:5,0,32	0/1:9,0:8:14.59:44,0,15	0/1:23,0:23:40.16:40,0,206	0/1:9,1:10:24.95:25,0,99	0/1:14,1:14:20.19:20,0,154	0/1:18,0:18:30.80:31,0,214	1/1:6,0:12:11.36:56,11,0	0/1:13,1:13:14.77:15,0,139	0/1:18,1:19:11.40:11,0,181	0/1:19,2:18:64.20:64,0,133	0/1:12,0:10:19.18:19,0,23	0/1:29,0:29:64.08:64,0,184	0/1:10,1:11:35.84:36,0,92	0/1:12,1:13:42.65:43,0,67	0/1:15,1:17:50.65:51,0,118	0/0:20,0:20:9.32:0,9,248	0/1:21,1:22:99:145,0,262	0/1:23,1:23:91.26:91,0,199	0/0:14,0:14:20.88:0,21,187	0/0:10,0:10:17.77:0,18,161
chr10	27616461	.	C	CA	14556.27	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-7.632;DP=477;FS=0.000;HRun=6;HaplotypeScore=38.3663;InbreedingCoeff=0.9294;MQ=76.11;MQ0=0;MQRankSum=-5.337;QD=32.49;ReadPosRankSum=0.774;VQSLOD=4.6603;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,11:12:33.11:415,33,0	1/1:0,8:8:24.08:302,24,0	0/0:9,0:9:24.03:0,24,236	0/0:8,0:8:21.03:0,21,206	1/1:3,33:36:99:1241,99,0	1/1:4,11:15:33.11:415,33,0	1/1:0,9:9:18.06:226,18,0	1/1:3,22:26:69:813,69,0	1/1:3,13:16:36.12:453,36,0	1/1:3,25:28:78.23:961,78,0	1/1:1,29:30:78.25:981,78,0	1/1:1,15:16:45.14:566,45,0	1/1:1,24:25:69.22:868,69,0	1/1:1,14:15:39.12:487,39,0	0/0:12,0:12:36.08:0,36,367	1/1:4,8:12:21.07:264,21,0	1/1:2,14:16:36.12:453,36,0	1/1:0,7:7:21.07:264,21,0	1/1:3,21:24:69.19:831,69,0	1/1:0,19:19:57.18:705,57,0	1/1:0,11:11:30.10:377,30,0	1/1:0,12:12:33.06:397,33,0	1/1:1,24:25:69.22:868,69,0	1/1:2,7:9:18.06:226,18,0	1/1:2,21:23:60.19:755,60,0	1/1:0,19:19:57.17:704,57,0	1/1:4,28:32:75.24:944,75,0	1/1:1,2:3:3.01:38,3,0
chr10	27619427	.	AGTGTGTGACTCTGTGTGT	A	760.34	PASS	AB=0.917;AC=3;AF=0.054;AN=56;BaseQRankSum=3.032;DP=558;FS=4.166;HRun=0;HaplotypeScore=204.5842;InbreedingCoeff=-0.0603;MQ=63.33;MQ0=42;MQRankSum=-1.980;QD=15.52;ReadPosRankSum=-0.173;VQSLOD=2.5838;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:30.08:0,30,746	0/0:9,0:9:15.05:0,15,430	0/0:62,0:13:11.63:0,12,418	0/0:75,0:25:30.86:0,31,930	0/0:26,0:26:44.80:0,45,1432	0/0:21,0:21:35.62:0,36,1134	0/1:13,0:13:26.11:26,0,886	0/0:25,0:25:66.23:0,66,1944	0/0:11,0:11:12.04:0,12,590	0/0:15,0:15:36.12:0,36,1936	0/0:15,0:15:15.05:0,15,661	0/0:11,0:11:26.12:0,26,1091	0/1:10,5:15:99:820,0,427	0/0:10,0:10:16.88:0,17,654	0/0:18,0:18:44.16:0,44,1796	0/0:15,0:15:33.10:0,33,1465	0/1:21,0:21:11.79:12,0,1422	0/0:11,0:11:21.07:0,21,810	0/0:18,0:18:48.16:0,48,2015	0/0:19,0:18:30.03:0,30,999	0/0:20,0:20:38.55:0,39,1670	0/0:16,0:16:24.72:0,25,524	0/0:13,0:13:27.76:0,28,812	0/0:16,0:16:23.71:0,24,1373	0/0:19,0:19:26.96:0,27,890	0/0:13,0:13:30.10:0,30,1318	0/0:15,0:15:23.79:0,24,944	0/0:10,0:10:18.53:0,19,952
chr10	27619438	.	C	CTGTG	3504.46	PASS	AB=0.761;AC=49;AF=0.942;AN=52;BaseQRankSum=-3.971;DP=583;FS=0.000;HRun=0;HaplotypeScore=113.1083;InbreedingCoeff=0.0827;MQ=57.78;MQ0=43;MQRankSum=0.866;QD=7.74;ReadPosRankSum=-0.741;VQSLOD=2.1936;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:16,13:29:2.60:10,3,0	1/1:2,0:10:5.05:54,5,0	./.	./.	1/1:9,3:22:15.89:221,16,0	1/1:15,8:25:3.01:71,3,0	1/1:13,0:13:0.47:1,0,0	1/1:30,0:30:8.65:247,9,0	1/1:3,0:11:9.03:174,9,0	1/1:8,10:20:32.94:459,33,0	1/1:7,10:18:3.01:71,3,0	1/1:6,3:9:6.02:121,6,0	0/1:14,0:14:7.10:7,0,108	1/1:7,1:8:2.80:25,3,0	1/1:8,5:15:11.78:224,12,0	1/1:7,8:17:9.02:194,9,0	1/1:15,2:24:9.92:189,10,0	1/1:5,0:12:6.02:104,6,0	1/1:15,0:22:23.95:275,24,0	1/1:21,0:21:9.03:128,9,0	1/1:19,0:19:11.93:147,12,0	1/1:4,6:15:4.93:76,5,0	0/1:5,1:15:0:1,0,0	1/1:8,1:18:5.48:83,5,0	1/1:5,0:22:6.02:104,6,0	0/1:8,0:15:13.59:183,0,14	1/1:9,1:15:9.03:180,9,0	1/1:5,0:12:9.50:157,10,0
chr10	27624343	.	C	CT	8370.65	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-6.239;DP=410;FS=26.629;HRun=9;HaplotypeScore=48.1934;InbreedingCoeff=0.8825;MQ=78.59;MQ0=1;MQRankSum=-4.172;QD=25.29;ReadPosRankSum=3.566;VQSLOD=3.3771;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,17:19:42.11:463,42,0	1/1:0,4:4:12.03:133,12,0	0/0:32,0:23:40.98:0,41,324	0/0:26,0:21:14.32:0,14,209	1/1:4,14:18:30.08:332,30,0	1/1:1,10:11:24.06:263,24,0	1/1:2,16:18:33.98:367,34,0	1/1:3,13:16:39.06:417,39,0	1/1:1,15:16:42.11:464,42,0	1/1:3,12:15:42.07:445,42,0	1/1:2,11:13:27.07:298,27,0	1/1:1,5:6:15.04:166,15,0	1/1:4,10:14:30.08:331,30,0	1/1:2,11:13:21.06:232,21,0	0/0:20,0:20:47.98:0,48,414	1/1:0,12:12:33.09:364,33,0	1/1:3,19:22:57.15:630,57,0	1/1:3,12:15:33.09:365,33,0	1/1:3,17:21:53.98:577,54,0	1/1:2,17:19:48.13:528,48,0	1/1:0,6:6:15.04:166,15,0	1/1:1,9:10:27.07:298,27,0	1/1:4,10:14:27.07:298,27,0	1/1:0,1:1:3.01:33,3,0	1/1:1,9:10:27.07:299,27,0	1/1:4,10:14:7.04:306,7,0	1/1:1,12:13:33.09:363,33,0	1/1:3,8:11:21.06:232,21,0
chr10	27626678	.	TAC	T	2012.94	PASS	AB=0.970;AC=44;AF=0.815;AN=54;BaseQRankSum=-3.689;DP=531;FS=23.700;HRun=0;HaplotypeScore=141.5201;InbreedingCoeff=0.2236;MQ=66.41;MQ0=11;MQRankSum=5.446;QD=4.29;ReadPosRankSum=7.239;VQSLOD=1.0925;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:24,1:24:8.81:47,9,0	1/1:6,0:6:3.98:43,4,0	./.	0/0:21,0:16:9.37:0,9,60	1/1:26,1:26:20.20:129,20,0	1/1:21,0:20:13.15:93,13,0	1/1:9,0:8:5.98:46,6,0	1/1:26,0:24:11.93:89,12,0	1/1:16,2:19:18.74:123,19,0	0/1:29,0:28:60.46:114,0,60	1/1:17,0:17:8.92:68,9,0	1/1:27,0:28:8.27:148,8,0	1/1:19,2:20:7.19:88,7,0	1/1:20,0:19:18.35:136,18,0	0/1:25,0:25:0.79:1,0,204	0/1:24,2:29:36.50:108,0,37	1/1:9,1:10:12.28:78,12,0	1/1:9,1:10:5.90:49,6,0	0/1:10,0:10:12.32:39,0,12	1/1:13,1:12:14.86:110,15,0	0/1:11,0:11:0:0,0,0	1/1:17,0:17:17.92:137,18,0	1/1:19,0:19:17.89:133,18,0	1/1:11,0:11:2.99:23,3,0	1/1:20,0:20:14.94:118,15,0	0/1:17,0:16:2.01:68,0,2	1/1:18,0:17:19.26:155,19,0	0/0:1,0:1:0.47:0,0,1
chr10	27626758	.	CATAT	C	16886.94	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-3.734;DP=687;FS=10.394;HRun=0;HaplotypeScore=202.1308;InbreedingCoeff=0.7805;MQ=50.17;MQ0=7;MQRankSum=-2.116;QD=25.98;ReadPosRankSum=3.861;VQSLOD=3.8513;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,23:28:21.10:460,21,0	1/1:5,8:13:26.86:450,27,0	0/0:20,0:12:31.03:0,31,341	0/0:16,0:10:18.44:0,18,283	1/1:11,25:34:42.14:687,42,0	1/1:8,20:26:47.62:816,48,0	1/1:4,17:19:36.12:624,36,0	1/1:12,42:54:99:1906,123,0	1/1:8,17:25:39.02:654,39,0	1/1:9,25:34:60.84:1254,61,0	1/1:4,22:26:48.13:794,48,0	1/1:10,18:23:30.03:521,30,0	1/1:14,18:31:45.11:726,45,0	1/1:7,19:24:24.93:410,25,0	1/1:7,36:42:69.18:1093,69,0	1/1:11,20:31:0.59:780,1,0	1/1:4,16:19:29.36:438,29,0	1/1:1,9:10:12.75:310,13,0	1/1:3,11:14:16.48:466,16,0	1/1:9,18:21:45.15:775,45,0	1/1:3,16:19:24.93:419,25,0	1/1:4,9:12:24.05:404,24,0	1/1:4,22:25:41.74:694,42,0	1/1:1,12:13:5.61:103,6,0	1/1:5,20:25:36.12:608,36,0	1/1:7,16:22:32.02:672,32,0	1/1:10,20:27:42.10:716,42,0	1/1:0,3:3:6.02:106,6,0
chr10	27628548	.	CT	C	606.36	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.244;DP=608;FS=3.331;HRun=2;HaplotypeScore=57.7279;InbreedingCoeff=0.9916;MQ=91.46;MQ0=0;MQRankSum=-3.308;QD=30.32;ReadPosRankSum=2.706;VQSLOD=3.3289;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:39.13:0,39,584	0/0:12,0:12:36.12:0,36,540	0/0:24,0:24:69.23:0,69,996	0/0:24,1:25:65.94:0,66,914	0/0:22,0:22:66.21:0,66,968	0/0:31,0:31:93.32:0,93,1394	0/0:16,0:16:48.15:0,48,698	0/0:39,0:39:99:0,114,1673	0/0:18,0:18:54.18:0,54,809	0/0:32,0:32:96.33:0,96,1438	0/0:24,0:24:72.23:0,72,1058	0/0:6,0:6:18.06:0,18,270	0/0:19,0:19:54.18:0,54,809	0/0:23,0:23:69.23:0,69,1030	1/1:1,19:20:54.18:701,54,0	0/0:28,0:28:81.27:0,81,1212	0/0:24,0:24:72.20:0,72,1054	0/0:19,0:19:54.65:0,55,810	0/0:19,0:19:54.16:0,54,769	0/0:22,0:22:66.20:0,66,949	0/0:12,0:12:33.11:0,33,495	0/0:17,0:17:48.16:0,48,719	0/0:19,0:18:57.19:0,57,842	0/0:19,0:19:57.19:0,57,854	0/0:20,0:20:60.19:0,60,879	0/0:27,0:27:78.26:0,78,1151	0/0:38,0:37:99:0,111,1642	0/0:19,0:19:51.09:0,51,678
chr10	27628686	.	G	GT	11025.05	PASS	AB=0.550;AC=51;AF=0.911;AN=56;BaseQRankSum=-7.101;DP=470;FS=0.000;HRun=9;HaplotypeScore=45.1753;InbreedingCoeff=0.7858;MQ=78.50;MQ0=0;MQRankSum=-4.037;QD=25.17;ReadPosRankSum=4.986;VQSLOD=4.8594;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,14:16:33.09:365,33,0	1/1:0,5:5:15.04:166,15,0	0/0:22,0:19:31.42:0,31,261	0/0:10,0:8:14.81:0,15,103	1/1:0,25:25:69.19:760,69,0	1/1:4,14:18:18.96:410,19,0	0/1:2,9:11:5:178,0,5	1/1:10,33:43:80.32:1045,80,0	1/1:5,14:19:39.11:431,39,0	1/1:4,22:25:66.17:725,66,0	1/1:3,19:22:54.15:597,54,0	1/1:4,12:16:33.09:365,33,0	1/1:3,9:12:21.06:233,21,0	1/1:2,8:10:18.01:186,18,0	1/1:1,19:20:48.13:531,48,0	1/1:0,11:11:24.06:266,24,0	1/1:3,16:19:42.03:448,42,0	1/1:3,10:13:30.08:332,30,0	1/1:5,10:15:30.08:332,30,0	1/1:3,24:27:72.15:782,72,0	1/1:3,11:14:33.09:365,33,0	1/1:0,13:13:36.06:385,36,0	1/1:2,16:18:48.13:531,48,0	1/1:1,4:5:12.03:133,12,0	1/1:4,15:18:42.11:465,42,0	1/1:4,11:15:33.09:365,33,0	1/1:2,17:19:42.11:465,42,0	1/1:0,7:7:15.04:166,15,0
chr10	27628979	.	AAAACCTTCTCTAT	A	2897.97	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=8.150;DP=656;FS=3.737;HRun=0;HaplotypeScore=232.9011;InbreedingCoeff=0.9955;MQ=86.49;MQ0=0;MQRankSum=-8.399;QD=99.93;ReadPosRankSum=1.804;VQSLOD=3.6108;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,111,6450	0/0:11,0:11:33.11:0,33,2044	0/0:21,0:21:57.17:0,57,2543	0/0:23,0:23:62.95:0,63,3227	0/0:17,0:17:51.18:0,51,3287	0/0:21,0:21:63.22:0,63,3656	0/0:17,0:17:51.18:0,51,3204	0/0:35,0:35:93.26:0,93,5100	0/0:27,0:27:75.26:0,75,4519	0/0:33,0:33:99:0,99,6064	0/0:18,0:18:54.17:0,54,3089	0/0:30,0:30:90.31:0,90,5779	0/0:21,0:21:63.20:0,63,3715	0/0:35,0:35:99:0,102,6446	1/1:1,28:29:75.26:2993,75,0	0/0:26,0:26:72.25:0,72,4631	0/0:27,0:27:81.28:0,81,5089	0/0:20,0:20:60.17:0,60,3310	0/0:11,0:11:33.11:0,33,1859	0/0:24,0:24:72.25:0,72,4580	0/0:24,0:24:72.25:0,72,4536	0/0:18,0:18:54.19:0,54,3262	0/0:18,0:18:51.18:0,51,3098	0/0:33,0:33:93.32:0,93,5729	0/0:20,0:20:57.18:0,57,3570	0/0:24,0:23:69.24:0,69,4238	0/0:27,0:26:81.28:0,81,5214	0/0:7,0:7:21.07:0,21,1386
chr10	27630578	.	G	GA	25956.32	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-7.684;DP=631;FS=6.940;HRun=0;HaplotypeScore=67.5510;InbreedingCoeff=0.9471;MQ=83.48;MQ0=0;MQRankSum=-8.773;QD=43.62;ReadPosRankSum=4.859;VQSLOD=5.0789;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,29:31:87.30:1391,87,0	1/1:0,2:2:6.02:96,6,0	0/0:22,0:23:59.86:0,60,781	0/0:12,0:13:29.64:0,30,390	1/1:2,28:30:72.25:1151,72,0	1/1:1,24:25:66.23:1055,66,0	1/1:0,18:18:48.16:767,48,0	1/1:1,35:36:99:1677,105,0	1/1:0,28:28:78.27:1247,78,0	1/1:4,19:23:57.15:884,57,0	1/1:1,19:20:50.94:815,51,0	1/1:2,23:25:69.24:1102,69,0	1/1:2,22:24:63.21:1007,63,0	1/1:0,24:24:69.24:1103,69,0	1/1:1,33:34:98.14:1540,98,0	1/1:0,29:29:81.28:1294,81,0	1/1:1,27:28:75.26:1197,75,0	1/1:3,9:12:24.80:429,25,0	1/1:1,18:19:57.19:908,57,0	1/1:0,21:21:54.18:863,54,0	1/1:0,28:28:75.26:1199,75,0	1/1:0,21:21:60.20:959,60,0	1/1:1,15:16:39.13:623,39,0	1/1:0,16:16:45.15:719,45,0	1/1:0,12:12:36.12:576,36,0	1/1:0,33:33:99:1579,99,0	1/1:0,30:28:81.28:1295,81,0	1/1:0,10:10:30.10:479,30,0
chr10	27631584	.	C	CAA	29467.35	PASS	AB=0.760;AC=54;AF=0.964;AN=56;BaseQRankSum=-0.156;DP=619;FS=4.942;HRun=2;HaplotypeScore=234.0618;InbreedingCoeff=-0.0288;MQ=51.13;MQ0=0;MQRankSum=-3.393;QD=47.60;ReadPosRankSum=2.203;VQSLOD=4.2987;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,15:21:54.01:830,54,0	1/1:2,13:15:42.14:761,42,0	0/1:6,3:9:51.81:151,0,52	0/1:7,3:10:0.87:181,0,1	1/1:4,17:21:57.14:949,57,0	1/1:4,31:35:99:1846,102,0	1/1:5,15:21:60.15:1019,60,0	1/1:9,17:26:75.21:1272,75,0	1/1:5,11:16:45.09:746,45,0	1/1:4,28:32:93.32:1706,93,0	1/1:5,15:20:57.11:939,57,0	1/1:4,19:23:69.12:1143,69,0	1/1:4,16:20:60.13:1015,60,0	1/1:4,14:18:51.17:890,51,0	1/1:4,32:36:99:1918,108,0	1/1:7,26:33:99:1713,99,0	1/1:0,9:9:24.08:428,24,0	1/1:4,13:17:48.16:879,48,0	1/1:9,10:19:48.15:803,48,0	1/1:7,25:32:93.28:1652,93,0	1/1:7,10:16:39.04:615,39,0	1/1:8,20:28:78.21:1317,78,0	1/1:3,31:34:87.30:1613,87,0	1/1:3,10:13:33.02:509,33,0	1/1:5,26:31:90.26:1594,90,0	1/1:4,15:19:57.13:954,57,0	1/1:4,31:34:99:1795,99,0	1/1:5,3:7:17.96:231,18,0
chr10	27633674	.	C	CA	10287.20	PASS	AB=0.863;AC=51;AF=0.911;AN=56;BaseQRankSum=-8.393;DP=448;FS=4.554;HRun=10;HaplotypeScore=44.1520;InbreedingCoeff=0.5053;MQ=68.85;MQ0=0;MQRankSum=-0.429;QD=24.04;ReadPosRankSum=1.442;VQSLOD=5.4409;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,14:19:45.08:469,45,0	1/1:1,8:9:24.06:256,24,0	0/1:5,0:6:1.67:2,0,37	0/1:8,0:8:17.68:18,0,37	1/1:8,20:29:65.99:681,66,0	1/1:1,13:15:38.93:398,39,0	1/1:1,10:10:27.07:288,27,0	1/1:6,19:25:54.14:575,54,0	1/1:3,11:14:30.08:320,30,0	1/1:2,20:22:60.15:640,60,0	1/1:3,20:24:22.57:595,23,0	1/1:2,4:6:12.03:128,12,0	1/1:1,10:11:24.06:256,24,0	1/1:2,11:13:11.45:327,11,0	0/0:1,0:20:38.70:0,39,112	1/1:2,15:17:23.48:455,23,0	1/1:4,15:19:45.11:480,45,0	1/1:0,12:12:36.09:384,36,0	1/1:5,8:13:24.04:247,24,0	1/1:5,17:23:38.33:586,38,0	1/1:0,10:10:30.08:320,30,0	1/1:3,11:14:33.08:352,33,0	1/1:4,15:19:42.11:448,42,0	1/1:1,13:14:12.58:328,13,0	1/1:0,10:10:30.08:320,30,0	1/1:5,23:28:63.15:665,63,0	1/1:4,22:26:32.50:551,32,0	0/1:3,7:10:0.58:200,0,1
chr10	27634442	.	CT	C	609.33	PASS	AB=0.900;AC=3;AF=0.054;AN=56;BaseQRankSum=3.885;DP=611;FS=5.045;HRun=10;HaplotypeScore=82.5860;InbreedingCoeff=0.6852;MQ=72.66;MQ0=0;MQRankSum=0.747;QD=14.51;ReadPosRankSum=0.966;VQSLOD=3.9887;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:60.10:0,60,633	0/1:8,1:9:5:5,0,176	0/0:17,0:17:35.89:0,36,332	0/0:18,1:19:10.65:0,11,326	0/0:25,1:25:34.10:0,34,592	0/0:29,3:32:41.14:0,41,900	0/0:18,1:19:28.10:0,28,538	0/0:33,0:33:75.14:0,75,796	0/0:20,0:20:51.12:0,51,555	0/0:19,0:19:45.08:0,45,497	0/0:21,0:21:54:0,54,566	0/0:12,0:12:30.08:0,30,332	0/0:23,0:23:66.17:0,66,723	0/0:20,0:20:57.15:0,57,630	1/1:1,32:33:80.98:703,81,0	0/0:25,0:27:77.88:0,78,823	0/0:24,0:24:66.16:0,66,720	0/0:27,0:27:75.14:0,75,802	0/0:22,0:23:56.96:0,57,593	0/0:34,0:34:63.79:0,64,884	0/0:13,0:13:33.07:0,33,349	0/0:22,0:22:54.14:0,54,588	0/0:16,0:16:42.11:0,42,462	0/0:18,2:20:22.08:0,22,464	0/0:16,0:16:42.11:0,42,465	0/0:28,2:30:29.43:0,29,765	0/0:22,1:23:31.13:0,31,561	0/0:11,0:11:30.08:0,30,332
chr10	27634776	.	GAA	G	672.52	PASS	AB=0.853;AC=22;AF=0.393;AN=56;BaseQRankSum=0.883;DP=338;FS=0.000;HRun=3;HaplotypeScore=98.3561;InbreedingCoeff=-0.2223;MQ=30.68;MQ0=19;MQRankSum=0.334;QD=3.19;ReadPosRankSum=2.355;VQSLOD=-0.6340;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:18:24.57:0,25,205	0/1:5,0:5:15.91:17,0,16	0/0:15,0:3:9.03:0,9,145	0/0:11,0:3:9.03:0,9,145	0/1:11,3:13:24.57:82,0,25	0/1:6,2:8:36.58:37,0,119	0/1:18,6:23:60.37:60,0,187	0/0:10,0:9:23.11:0,23,311	0/1:9,2:10:52.61:53,0,62	0/1:13,2:13:38.06:38,0,140	0/1:7,3:10:49.98:50,0,50	0/1:7,2:9:47.58:52,0,48	0/1:8,0:8:5.40:5,0,62	0/0:17,0:17:26.07:0,26,176	0/0:11,0:10:20.97:0,21,190	1/1:6,2:7:10.04:61,10,0	0/1:17,0:16:53:53,0,140	0/1:6,1:7:30.59:31,0,118	0/1:6,1:5:47.94:48,0,67	0/1:6,2:8:28.18:28,0,82	0/0:21,1:18:21.35:0,21,192	0/1:10,3:12:1.23:1,0,259	0/0:11,0:9:20.72:0,21,174	0/0:11,0:11:7.24:0,7,100	0/1:13,1:14:0.20:0,0,77	0/1:9,6:12:54.41:112,0,54	1/1:2,2:3:7.56:42,8,0	1/1:9,4:12:0.85:63,1,0
chr10	27634777	.	A	AGGG	1373.21	PASS	AB=0.982;AC=25;AF=0.446;AN=56;BaseQRankSum=-1.509;DP=317;FS=1.922;HRun=2;HaplotypeScore=97.6702;InbreedingCoeff=-0.1786;MQ=29.89;MQ0=18;MQRankSum=2.867;QD=6.24;ReadPosRankSum=0.906;VQSLOD=-0.5819;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:23.54:0,24,261	0/1:4,0:4:2.26:21,0,2	0/0:15,0:3:8.96:0,9,110	0/0:11,0:3:9.03:0,9,152	1/1:12,0:11:11.29:75,11,0	0/1:6,1:7:99:123,0,122	0/1:22,0:22:98.43:98,0,178	0/0:9,0:8:23.74:0,24,304	0/1:10,1:10:70.12:112,0,70	0/1:13,0:11:9.85:10,0,249	0/1:9,1:10:58.39:145,0,58	0/1:9,0:9:44.54:49,0,45	0/1:9,0:8:21.24:67,0,21	0/1:14,0:14:3.02:3,0,47	0/0:11,0:10:14.90:0,15,184	1/1:7,0:6:11.65:105,12,0	0/1:17,0:16:99:139,0,103	0/1:6,0:6:36.41:36,0,90	0/1:7,0:5:32.61:33,0,81	0/1:8,0:8:66.43:66,0,93	0/0:19,1:16:20.23:0,20,177	0/1:13,0:12:0.03:0,0,341	0/1:10,0:9:3.79:4,0,120	0/1:11,0:11:10.41:10,0,63	0/0:13,0:13:2.40:0,2,143	0/1:14,0:12:33.24:164,0,33	1/1:3,1:3:9.03:122,9,0	1/1:11,1:11:14.24:156,14,0
chr10	27634780	.	GAA	G	597.01	PASS	AB=0.822;AC=18;AF=0.321;AN=56;BaseQRankSum=1.655;DP=321;FS=0.628;HRun=3;HaplotypeScore=97.8411;InbreedingCoeff=-0.3242;MQ=28.21;MQ0=19;MQRankSum=-0.202;QD=3.16;ReadPosRankSum=4.066;VQSLOD=-0.5707;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:17:17.61:0,18,246	0/0:3,0:3:6.02:0,6,96	0/0:18,0:3:9.03:0,9,181	0/0:11,0:3:9.03:0,9,182	0/1:12,3:14:50.02:89,0,50	0/1:4,2:6:47.59:48,0,92	0/1:15,6:21:52.93:53,0,165	0/0:8,0:8:19.28:0,19,256	0/1:10,2:11:35.80:36,0,69	0/1:13,2:13:42.98:43,0,208	0/1:6,3:9:35.73:56,0,36	0/1:6,2:8:43.76:44,0,50	0/0:8,0:8:10.94:0,11,78	0/0:14,0:14:25.13:0,25,257	0/0:10,0:9:20.97:0,21,211	1/1:2,2:5:7.64:43,8,0	0/1:16,0:14:5.76:6,0,178	0/1:6,1:7:10.49:10,0,183	0/1:6,1:5:53.83:54,0,76	0/1:6,2:8:33.82:34,0,69	0/0:19,1:17:21.31:0,21,194	0/1:11,3:13:8.22:8,0,267	0/0:9,0:8:20.78:0,21,216	0/0:11,0:11:8.69:0,9,128	0/1:12,1:13:4.68:5,0,86	0/1:8,6:12:62.50:129,0,62	0/1:3,2:4:15.75:32,0,16	0/1:10,4:13:31.62:67,0,32
chr10	27634815	.	GGAAA	G	1010.27	PASS	AB=0.948;AC=31;AF=0.554;AN=56;BaseQRankSum=1.936;DP=329;FS=32.295;HRun=0;HaplotypeScore=97.5508;InbreedingCoeff=-0.2294;MQ=36.69;MQ0=11;MQRankSum=-6.014;QD=3.47;ReadPosRankSum=2.094;VQSLOD=0.0495;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:19,0:18:18.55:84,0,19	1/1:6,0:6:3:19,3,0	0/0:11,0:3:2.45:0,2,22	0/0:13,0:3:9:0,9,82	0/1:9,0:9:4.27:4,0,89	0/1:8,0:8:13.16:13,0,134	1/1:15,0:13:22.80:153,23,0	1/1:19,0:16:29.94:192,30,0	0/1:11,0:9:13.07:13,0,101	0/1:13,0:13:75.21:75,0,162	0/1:5,7:12:7.55:8,0,80	0/1:11,0:11:15.55:53,0,16	0/0:5,0:5:9.03:0,9,141	0/0:9,0:9:8.25:0,8,139	1/1:5,0:5:11.53:76,12,0	0/1:9,0:7:1.49:1,0,136	0/1:21,0:20:30.89:31,0,248	0/1:12,0:12:59.49:59,0,152	0/1:7,0:7:14.90:15,0,75	0/1:4,6:10:4.01:4,0,111	0/1:22,0:20:28.57:29,0,198	0/1:12,0:12:69.28:69,0,107	0/1:9,0:9:22.69:23,0,165	0/1:17,0:18:32.41:32,0,191	0/1:13,0:13:27.13:27,0,77	1/1:2,5:7:9.06:48,9,0	1/1:7,0:6:8.09:82,8,0	1/1:14,0:13:10.67:65,11,0
chr10	27634819	.	AGAAAGAAG	A	772.97	PASS	AB=1.000;AC=25;AF=0.446;AN=56;BaseQRankSum=2.516;DP=326;FS=62.536;HRun=0;HaplotypeScore=109.5979;InbreedingCoeff=-0.3590;MQ=38.67;MQ0=10;MQRankSum=-7.132;QD=3.02;ReadPosRankSum=2.261;VQSLOD=-0.6855;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:20,0:18:59.99:60,0,69	1/1:0,6:6:5.58:85,6,0	0/0:11,0:3:2.50:0,3,22	0/0:12,0:3:9:0,9,82	0/0:9,0:9:3.46:0,3,243	0/1:7,0:7:11.02:11,0,290	0/1:14,0:12:14.06:14,0,159	1/1:22,0:18:29.79:192,30,0	0/0:10,0:9:8.99:0,9,242	0/1:13,0:13:36.38:36,0,474	0/1:9,0:9:7.55:8,0,183	0/1:12,0:12:29.23:41,0,29	0/0:5,0:5:9.03:0,9,262	0/1:12,0:12:9.34:9,0,305	1/1:8,0:8:17.91:176,18,0	0/1:10,0:8:1.47:1,0,216	0/1:19,0:18:38.19:38,0,488	0/1:11,0:11:58.43:58,0,301	0/1:6,0:6:14.83:15,0,190	0/1:10,0:10:1.02:1,0,211	0/0:23,0:21:5.33:0,5,410	0/1:12,0:12:66.27:66,0,256	0/1:8,0:8:23.58:24,0,342	0/1:19,0:19:13.11:13,0,467	0/1:12,0:12:24.12:24,0,142	0/1:7,0:7:32.62:33,0,113	0/1:6,0:6:0.55:1,0,130	0/1:13,0:12:22.45:22,0,146
chr10	27635966	.	CT	C	7889.44	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-7.037;DP=413;FS=2.085;HRun=10;HaplotypeScore=49.9289;InbreedingCoeff=0.8804;MQ=75.65;MQ0=1;MQRankSum=-3.435;QD=20.76;ReadPosRankSum=2.461;VQSLOD=5.7724;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,10:12:26.99:234,27,0	1/1:1,11:12:32.99:286,33,0	0/0:13,0:11:7.04:0,7,63	0/0:6,0:5:4.53:0,5,31	1/1:7,27:33:80.90:694,81,0	1/1:1,15:16:38.99:339,39,0	1/1:0,7:7:18:156,18,0	1/1:4,21:25:62.89:529,63,0	1/1:0,7:7:21:182,21,0	1/1:3,19:22:56.09:450,56,0	1/1:1,18:19:53.78:449,54,0	1/1:1,8:9:21:182,21,0	1/1:3,10:13:29.98:258,30,0	1/1:1,11:12:29.99:260,30,0	0/0:13,0:13:34.09:0,34,168	1/1:0,14:14:35.99:313,36,0	1/1:2,16:18:35.99:312,36,0	1/1:3,11:14:26.98:234,27,0	1/1:3,12:15:35.99:313,36,0	1/1:3,20:23:56.94:488,57,0	1/1:0,9:9:26.99:234,27,0	1/1:1,10:11:29.90:250,30,0	1/1:5,8:13:20.76:182,21,0	1/1:0,4:4:9:78,9,0	1/1:3,17:20:38.98:339,39,0	1/1:0,22:22:65.83:551,66,0	1/1:4,18:22:50.97:443,51,0	1/1:1,6:7:14.99:130,15,0
chr10	27635976	.	T	TTA	543.91	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-5.466;DP=414;FS=0.000;HRun=0;HaplotypeScore=86.0547;InbreedingCoeff=0.9008;MQ=74.70;MQ0=1;MQRankSum=-2.487;QD=36.26;ReadPosRankSum=-0.206;VQSLOD=5.4383;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:35.87:0,36,276	0/0:13,0:13:38.85:0,39,296	0/0:12,0:9:13.34:0,13,95	0/0:7,0:6:14.60:0,15,105	0/0:30,0:29:86.46:0,86,646	0/0:18,0:18:47.83:0,48,367	0/0:10,0:10:23.92:0,24,185	0/0:30,0:30:82.97:0,83,609	0/0:9,0:9:26.91:0,27,206	0/0:21,0:21:51.74:0,52,350	0/0:20,0:20:56.48:0,56,411	0/0:8,0:8:20.92:0,21,158	0/0:11,0:12:32.84:0,33,247	0/0:13,0:13:35.88:0,36,275	1/1:0,14:15:36.12:639,36,0	0/0:15,0:15:38.86:0,39,295	0/0:18,0:18:41.83:0,42,316	0/0:12,0:12:26.87:0,27,201	0/0:13,0:13:36.75:0,37,273	0/0:26,0:26:71.50:0,72,542	0/0:11,0:11:32.88:0,33,251	0/0:11,0:11:15.04:0,15,210	0/0:8,0:8:20.92:0,21,158	0/0:5,0:5:11.95:0,12,91	0/0:17,0:17:38.85:0,39,294	0/0:22,0:22:65.34:0,65,476	0/0:18,0:18:50.81:0,51,384	0/0:7,0:7:17.94:0,18,137
chr10	27636121	.	A	AT	745.80	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-6.558;DP=636;FS=4.441;HRun=3;HaplotypeScore=72.0545;InbreedingCoeff=0.9973;MQ=76.01;MQ0=0;MQRankSum=-3.160;QD=23.31;ReadPosRankSum=-0.353;VQSLOD=2.8298;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:60.18:0,60,719	0/0:12,0:12:36.11:0,36,432	0/0:21,0:21:61.98:0,62,697	0/0:16,0:16:36.11:0,36,427	0/0:29,0:29:78.23:0,78,925	0/0:25,0:25:72.20:0,72,852	0/0:21,0:21:57.16:0,57,672	0/0:30,0:30:87.23:0,87,1009	0/0:13,0:13:36.11:0,36,432	0/0:22,0:22:66.19:0,66,777	0/0:23,0:23:69.20:0,69,817	0/0:15,0:15:42.13:0,42,504	0/0:27,0:27:75.23:0,75,900	0/0:25,0:25:72.22:0,72,864	1/1:4,28:32:60.20:841,60,0	0/0:22,0:22:63.18:0,63,745	0/0:24,0:24:69.21:0,69,828	0/0:9,0:9:24.07:0,24,288	0/0:25,0:25:66.18:0,66,772	0/0:25,0:25:75.20:0,75,877	0/0:19,0:19:57.14:0,57,661	0/0:11,0:11:33.10:0,33,396	0/0:24,0:24:69.21:0,69,828	0/0:17,0:17:51.16:0,51,612	0/0:30,0:30:90.28:0,90,1080	0/0:28,0:28:81.24:0,81,963	0/0:41,0:41:99:0,117,1382	0/0:28,0:28:84.20:0,84,960
chr10	27638809	.	CT	C	15516.36	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=6.317;DP=550;FS=10.277;HRun=4;HaplotypeScore=93.0287;InbreedingCoeff=0.9937;MQ=80.09;MQ0=0;MQRankSum=-6.531;QD=31.22;ReadPosRankSum=4.760;VQSLOD=4.5358;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,12:12:36.11:429,36,0	1/1:0,6:6:18.05:213,18,0	0/0:17,0:17:44.63:0,45,585	0/0:16,0:16:45.13:0,45,589	1/1:1,23:24:57.17:681,57,0	1/1:0,29:29:81.25:972,81,0	1/1:2,10:12:21.06:252,21,0	1/1:3,23:26:69.21:828,69,0	1/1:0,20:20:48.15:576,48,0	1/1:2,29:31:87.23:1029,87,0	1/1:2,29:31:75.23:897,75,0	1/1:0,14:14:27.08:324,27,0	1/1:0,23:23:60.18:720,60,0	1/1:0,16:16:39.12:466,39,0	0/0:20,0:20:54.17:0,54,738	1/1:2,20:22:57.17:684,57,0	1/1:1,13:14:33.10:396,33,0	1/1:0,8:8:21.06:252,21,0	1/1:1,13:14:39.12:468,39,0	1/1:1,26:27:78.24:934,78,0	1/1:0,15:15:42.13:504,42,0	1/1:0,18:18:54.16:645,54,0	1/1:0,21:21:54.09:648,54,0	1/1:0,18:18:45.14:540,45,0	1/1:4,21:25:60.18:720,60,0	1/1:2,21:23:63.19:756,63,0	1/1:0,25:25:66.20:792,66,0	1/1:0,23:23:66.20:792,66,0
chr10	27639231	.	GAC	G	1177.70	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-0.437;DP=581;FS=0.765;HRun=0;HaplotypeScore=91.0885;InbreedingCoeff=0.9828;MQ=73.55;MQ0=0;MQRankSum=1.295;QD=40.61;ReadPosRankSum=1.593;VQSLOD=5.6412;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:84.29:0,84,1698	0/0:5,0:5:15.05:0,15,305	0/0:14,0:14:38.92:0,39,715	0/0:22,0:21:50.70:0,51,885	0/0:26,0:26:78.25:0,78,1545	0/0:23,0:22:69.24:0,69,1381	0/0:19,0:19:57.20:0,57,1158	0/0:21,0:21:63.22:0,63,1279	0/0:11,0:11:33.11:0,33,670	0/0:20,0:20:60.21:0,60,1220	0/0:24,0:24:72.25:0,72,1460	0/0:13,0:13:39.13:0,39,793	0/0:26,0:26:78.27:0,78,1583	0/0:27,0:27:81.28:0,81,1610	1/1:0,29:29:78.27:1273,78,0	0/0:23,0:23:66.23:0,66,1327	0/0:38,0:38:99:0,114,2267	0/0:12,0:12:36.10:0,36,694	0/0:22,0:22:63.21:0,63,1194	0/0:36,0:36:99:0,108,2182	0/0:19,0:19:57.20:0,57,1158	0/0:17,0:17:51.17:0,51,1020	0/0:18,0:18:54.19:0,54,1097	0/0:10,0:10:27.09:0,27,549	0/0:12,0:12:36.12:0,36,731	0/0:20,0:20:60.21:0,60,1209	0/0:33,0:33:99:0,99,1914	0/0:13,0:13:39.13:0,39,792
chr10	27639385	.	GAA	G	14929.97	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-4.357;DP=606;FS=5.942;HRun=9;HaplotypeScore=122.6214;InbreedingCoeff=0.9842;MQ=80.69;MQ0=0;MQRankSum=-5.383;QD=28.28;ReadPosRankSum=4.599;VQSLOD=4.1670;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,21:25:60.03:665,60,0	1/1:0,6:6:12.04:140,12,0	0/0:23,0:24:42.38:0,42,607	0/0:14,0:15:26.87:0,27,407	1/1:5,17:22:51.06:576,51,0	1/1:0,25:25:63.19:734,63,0	1/1:0,17:17:48.14:559,48,0	1/1:5,32:36:96.16:1066,96,0	1/1:1,20:21:57.17:664,57,0	1/1:1,17:18:48.13:549,48,0	1/1:3,19:22:45.02:501,45,0	1/1:1,16:17:48.14:559,48,0	1/1:3,21:24:63.08:715,63,0	1/1:4,15:19:36.04:402,36,0	0/0:5,0:39:77.36:0,77,273	1/1:1,17:18:35.26:449,35,0	1/1:1,14:15:18.14:430,18,0	1/1:1,7:8:21.06:245,21,0	1/1:2,21:23:63.13:700,63,0	1/1:5,26:31:71.98:779,72,0	1/1:1,11:12:33.10:385,33,0	1/1:2,17:19:41.96:454,42,0	1/1:1,27:28:78.23:909,78,0	1/1:0,13:13:33.10:384,33,0	1/1:0,22:22:57.10:647,57,0	1/1:2,28:30:81.15:898,81,0	1/1:5,28:33:72.11:821,72,0	1/1:0,23:23:60.18:699,60,0
chr10	27639498	.	TG	T	18902.01	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=5.827;DP=645;FS=5.676;HRun=3;HaplotypeScore=64.6808;InbreedingCoeff=0.9991;MQ=69.09;MQ0=0;MQRankSum=-7.974;QD=33.45;ReadPosRankSum=5.073;VQSLOD=5.1462;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,23:25:63.20:781,63,0	1/1:1,9:10:27.08:335,27,0	0/0:17,0:17:50.52:0,51,670	0/0:24,0:23:66.19:0,66,917	1/1:1,31:32:87.24:1062,87,0	1/1:1,22:23:60.19:744,60,0	1/1:0,13:13:36.11:446,36,0	1/1:0,39:39:99:1316,111,0	1/1:0,21:21:48.15:595,48,0	1/1:0,35:35:99:1287,105,0	1/1:2,36:38:99:1207,99,0	1/1:0,26:26:63.20:781,63,0	1/1:0,19:19:47.92:594,48,0	1/1:0,21:21:48.15:595,48,0	0/0:39,0:39:99:0,111,1579	1/1:1,17:18:48.15:595,48,0	1/1:0,11:11:33.10:409,33,0	1/1:1,15:16:42.13:520,42,0	1/1:1,20:21:60.19:744,60,0	1/1:0,31:31:90.28:1116,90,0	1/1:0,10:10:30.09:372,30,0	1/1:0,26:26:75.19:912,75,0	1/1:0,18:18:54.17:669,54,0	1/1:0,10:10:30.09:372,30,0	1/1:0,22:22:54.17:669,54,0	1/1:1,26:27:78.24:958,78,0	1/1:0,38:38:99:1264,102,0	1/1:0,15:15:45.14:558,45,0
chr10	27642516	.	A	AACACAC	1340.91	PASS	AB=1.000;AC=17;AF=0.327;AN=52;BaseQRankSum=6.323;DP=612;FS=2.010;HRun=0;HaplotypeScore=213.7657;InbreedingCoeff=-0.0893;MQ=56.16;MQ0=12;MQRankSum=-7.086;QD=4.03;ReadPosRankSum=-7.184;VQSLOD=0.4491;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:30:0.01:0,0,0	0/0:10,0:10:2.24:0,2,44	./.	./.	0/0:23,0:23:5.75:0,6,71	0/1:20,0:19:15.14:77,0,15	0/0:16,0:16:1.82:0,2,5	0/0:24,0:22:6.77:0,7,89	0/1:18,0:18:61.09:61,0,87	0/1:24,0:23:61.09:61,0,80	0/0:20,0:20:3.01:0,3,51	0/1:27,0:27:55.51:127,0,56	0/1:18,0:18:39.39:39,0,66	0/0:17,0:17:3.31:0,3,46	1/1:17,16:45:21:392,21,0	0/1:28,0:28:81.35:86,0,81	0/0:9,0:8:2.90:0,3,16	0/1:8,0:7:0.79:1,0,15	0/1:17,0:16:68.67:98,0,69	0/0:25,0:25:3.33:0,3,52	0/0:16,0:16:3.14:0,3,26	0/0:23,0:23:11.63:0,12,125	0/0:21,0:20:5.99:0,6,50	0/0:18,0:18:2.98:0,3,22	1/1:31,0:31:5.54:108,6,0	0/1:26,0:26:99:144,0,147	0/1:28,0:28:85.74:163,0,86	1/1:13,0:13:14.63:128,15,0
chr10	27642547	.	A	ACTCT	3144.01	PASS	AB=0.987;AC=21;AF=0.375;AN=56;BaseQRankSum=8.667;DP=695;FS=3.796;HRun=0;HaplotypeScore=233.7084;InbreedingCoeff=-0.2666;MQ=44.93;MQ0=38;MQRankSum=-5.753;QD=8.54;ReadPosRankSum=5.792;VQSLOD=2.3112;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:26:0.60:1,0,1	0/0:7,0:7:6.47:0,6,83	0/0:92,0:21:38.55:0,39,614	0/0:99,0:25:42.28:0,42,831	0/0:17,1:18:2.61:0,3,36	0/1:15,1:15:32.17:72,0,32	1/1:13,0:13:2.49:44,2,0	0/1:25,0:23:99:426,0,172	0/1:20,0:20:81.63:214,0,82	0/1:19,0:18:14.31:222,0,14	0/0:16,0:16:2.74:0,3,46	0/1:20,2:22:2.75:185,0,3	0/1:16,0:15:90.94:142,0,91	0/1:16,1:17:26.33:26,0,124	0/1:44,0:44:78.75:79,0,270	0/1:17,0:17:61.76:75,0,62	1/1:7,0:6:1.22:145,1,0	0/1:9,0:8:30.12:79,0,30	0/1:22,0:20:54.78:489,0,55	0/0:26,0:26:2.13:0,2,63	0/0:16,0:16:1.54:0,2,18	0/0:17,0:17:8.37:0,8,61	0/0:19,1:19:14.72:0,15,210	0/0:14,0:14:3.48:0,3,46	1/1:23,2:25:7.23:102,7,0	0/1:29,0:29:99:472,0,204	0/1:28,0:28:99:384,0,213	0/1:13,0:13:99:137,0,112
chr10	27642549	.	A	ACTCTCT	8107.01	PASS	AB=0.885;AC=41;AF=0.732;AN=56;BaseQRankSum=3.827;DP=692;FS=14.420;HRun=0;HaplotypeScore=229.2060;InbreedingCoeff=0.4005;MQ=48.27;MQ0=37;MQRankSum=-3.518;QD=17.82;ReadPosRankSum=4.604;VQSLOD=2.8423;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:6,18:25:0.78:1,0,1	0/0:5,0:5:3.35:0,3,20	0/0:94,0:23:48.31:0,48,893	0/0:107,0:31:64.03:0,64,1314	1/1:15,2:18:8.95:150,9,0	1/1:11,5:15:10.92:244,11,0	1/1:14,1:15:5.90:70,6,0	1/1:26,0:24:2.52:736,3,0	1/1:16,4:20:26.68:475,27,0	1/1:1,13:18:37.64:617,38,0	1/1:12,4:17:5.08:47,5,0	1/1:16,6:22:20.19:467,20,0	1/1:14,1:14:7.29:306,7,0	0/1:18,0:18:11.88:52,0,12	0/1:45,0:45:19.51:20,0,398	1/1:13,3:16:10.31:253,10,0	1/1:6,0:6:11.74:175,12,0	1/1:9,0:8:14.57:230,15,0	1/1:17,3:19:44.39:985,44,0	1/1:13,11:24:10.67:200,11,0	1/1:14,0:14:5.52:74,6,0	1/1:14,3:17:10.56:169,11,0	0/0:16,1:16:6.51:0,7,51	0/0:14,0:14:0.47:0,0,2	1/1:14,9:24:9.60:323,10,0	1/1:25,3:28:40.03:1232,40,0	0/1:26,2:28:2.20:845,0,2	0/1:11,1:12:16.92:439,0,17
chr10	27642551	.	A	ACTCTCTCT	11850.87	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=2.072;DP=670;FS=27.478;HRun=0;HaplotypeScore=236.7358;InbreedingCoeff=0.6323;MQ=49.29;MQ0=35;MQRankSum=-1.977;QD=27.88;ReadPosRankSum=2.678;VQSLOD=3.1606;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:22:2.12:23,2,0	1/1:5,0:5:8.15:107,8,0	0/0:95,0:25:18.41:0,18,1070	0/0:105,0:32:59.45:0,59,1670	1/1:17,0:18:8.93:149,9,0	1/1:15,0:15:16.78:317,17,0	1/1:14,0:14:2.89:25,3,0	1/1:25,0:23:66.11:1503,66,0	1/1:18,1:19:26.39:653,26,0	1/1:14,0:14:28.90:588,29,0	1/1:17,0:17:5.17:68,5,0	1/1:21,0:21:20.73:500,21,0	1/1:12,3:14:24.48:573,24,0	1/1:14,3:18:17.99:230,18,0	0/0:44,0:44:36.79:0,37,584	1/1:16,0:16:11:297,11,0	1/1:6,0:5:7.22:152,7,0	1/1:7,0:6:15.02:326,15,0	1/1:21,0:19:54.15:1333,54,0	1/1:23,1:24:9.91:170,10,0	1/1:12,0:12:2.40:25,2,0	1/1:15,1:16:10.70:98,11,0	1/1:11,4:14:4.58:45,5,0	1/1:12,2:14:4.94:47,5,0	1/1:24,0:24:8.23:324,8,0	1/1:5,18:26:65.51:1878,66,0	1/1:18,9:27:59.38:1610,59,0	1/1:4,8:13:23.97:811,24,0
chr10	27642553	.	A	ACTCTCTCTCT	14311.66	PASS	AB=0.990;AC=49;AF=0.875;AN=56;BaseQRankSum=1.501;DP=716;FS=20.043;HRun=0;HaplotypeScore=283.9906;InbreedingCoeff=0.5460;MQ=50.03;MQ0=35;MQRankSum=-3.295;QD=25.97;ReadPosRankSum=1.340;VQSLOD=2.9535;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:17,2:19:3.15:46,3,0	1/1:6,0:6:8.96:105,9,0	0/1:96,0:29:3.42:3,0,1255	0/0:105,0:35:74.02:0,74,1991	1/1:23,0:23:7.18:112,7,0	1/1:18,0:17:12.90:344,13,0	1/1:6,8:17:5.92:151,6,0	1/1:34,0:32:81.70:2527,82,0	1/1:21,0:21:22.85:704,23,0	1/1:13,0:13:29.44:708,29,0	1/1:20,0:20:3.32:64,3,0	1/1:25,0:25:27.51:629,28,0	1/1:16,0:15:23.51:599,24,0	1/1:19,0:19:12.03:222,12,0	0/0:43,0:43:41.68:0,42,818	1/1:21,0:21:13.07:310,13,0	1/1:4,4:7:7.18:186,7,0	1/1:8,0:7:18.02:476,18,0	1/1:23,1:22:63.12:1871,63,0	1/1:26,0:26:10.27:165,10,0	1/1:7,5:15:1.29:3,1,0	1/1:21,0:21:6.91:22,7,0	0/0:17,0:16:1.32:0,1,2	1/1:11,2:13:2.90:49,3,0	1/1:24,0:24:6.72:352,7,0	1/1:23,0:23:60.13:1920,60,0	1/1:27,0:28:59.46:1843,59,0	1/1:11,0:11:23.97:899,24,0
chr10	27642628	.	G	GAGAGAC	15574.34	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=3.666;DP=668;FS=2.779;HRun=0;HaplotypeScore=204.7349;InbreedingCoeff=0.6562;MQ=62.42;MQ0=4;MQRankSum=-4.964;QD=29.61;ReadPosRankSum=-3.050;VQSLOD=4.3082;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:21,2:23:21.07:457,21,0	1/1:2,2:4:3.01:98,3,0	0/0:39,0:28:3.01:0,3,43	0/0:72,0:39:4.57:0,5,79	1/1:6,13:21:30.02:974,30,0	1/1:7,10:22:24.08:780,24,0	1/1:8,2:10:18.05:401,18,0	1/1:49,0:49:45.03:668,45,0	1/1:9,6:17:12.04:390,12,0	1/1:5,9:18:33.89:758,34,0	1/1:11,9:24:15.05:412,15,0	1/1:7,15:23:33.11:1073,33,0	1/1:3,16:23:39.13:1266,39,0	1/1:8,13:26:12.04:390,12,0	0/0:31,0:31:66.23:0,66,1325	1/1:12,20:34:36.12:1170,36,0	1/1:6,0:6:3.01:98,3,0	1/1:5,7:13:3.01:98,3,0	1/1:13,7:21:30.04:591,30,0	1/1:10,12:27:30.10:922,30,0	1/1:19,0:19:12.01:137,12,0	1/1:13,12:27:21.07:683,21,0	1/1:7,14:24:21.07:670,21,0	1/1:3,6:10:6.02:195,6,0	1/1:8,12:21:18.06:585,18,0	1/1:5,15:26:57.04:1244,57,0	1/1:9,16:29:33.11:1073,33,0	1/1:5,3:8:18.06:442,18,0
chr10	27643205	.	TA	T	826.83	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.951;DP=627;FS=0.000;HRun=1;HaplotypeScore=56.1466;InbreedingCoeff=0.9943;MQ=85.14;MQ0=0;MQRankSum=-3.706;QD=33.07;ReadPosRankSum=2.888;VQSLOD=3.3012;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:27.09:0,27,432	0/0:12,0:12:36.12:0,36,576	0/0:24,0:24:66.22:0,66,1006	0/0:15,0:15:42.01:0,42,619	0/0:40,0:40:99:0,120,1868	0/0:21,0:21:63.21:0,63,1005	0/0:11,0:11:33.11:0,33,528	0/0:31,0:31:93.32:0,93,1480	0/0:32,0:32:96.33:0,96,1530	0/0:29,0:29:87.29:0,87,1359	0/0:22,0:22:63.21:0,63,1003	0/0:13,0:13:39.12:0,39,598	0/0:34,0:34:99:0,102,1631	0/0:26,0:26:75.26:0,75,1194	1/1:0,25:25:66.22:922,66,0	0/0:19,0:19:57.19:0,57,911	0/0:11,0:11:21.07:0,21,335	0/0:15,0:15:36.08:0,36,547	0/0:13,0:13:39.13:0,39,624	0/0:33,0:33:99:0,99,1560	0/0:24,0:24:72.22:0,72,1121	0/0:19,0:19:57.18:0,57,885	0/0:15,0:15:45.15:0,45,719	0/0:20,0:20:60.20:0,60,959	0/0:30,0:30:87.30:0,87,1385	0/0:35,0:35:99:0,105,1636	0/0:33,0:33:99:0,99,1513	0/0:16,0:16:48.16:0,48,767
chr10	27643698	.	G	GA	21102.13	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-10.725;DP=537;FS=1.773;HRun=0;HaplotypeScore=50.0576;InbreedingCoeff=0.9937;MQ=84.25;MQ0=0;MQRankSum=-4.581;QD=43.87;ReadPosRankSum=4.710;VQSLOD=4.9157;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,18:18:45.15:719,45,0	1/1:0,15:15:42.14:671,42,0	0/0:15,0:15:20.46:0,20,424	0/0:17,0:18:49.94:0,50,633	1/1:0,34:34:93.32:1473,93,0	1/1:0,16:16:45.15:719,45,0	1/1:0,18:18:51.17:814,51,0	1/1:2,25:27:70.65:1031,71,0	1/1:1,15:16:42.14:671,42,0	1/1:1,25:26:78.26:1235,78,0	1/1:0,31:31:87.30:1390,87,0	1/1:0,14:14:42.14:671,42,0	1/1:0,20:20:57.19:898,57,0	1/1:0,23:23:66.23:1055,66,0	0/0:23,0:23:69.22:0,69,949	1/1:0,17:17:51.17:815,51,0	1/1:1,17:18:51.17:811,51,0	1/1:0,7:7:21.07:330,21,0	1/1:2,10:12:30.09:456,30,0	1/1:2,34:36:96.33:1523,96,0	1/1:0,6:6:18.06:288,18,0	1/1:0,22:22:51.17:815,51,0	1/1:0,23:23:63.21:1007,63,0	1/1:0,12:12:36.12:575,36,0	1/1:0,19:19:51.17:815,51,0	1/1:0,21:21:63.19:978,63,0	1/1:0,18:17:51.17:814,51,0	1/1:0,12:12:33.11:527,33,0
chr10	27643874	.	C	CAT	34352.91	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-10.696;DP=755;FS=2.558;HRun=0;HaplotypeScore=77.9491;InbreedingCoeff=0.9922;MQ=87.96;MQ0=2;MQRankSum=-11.515;QD=48.80;ReadPosRankSum=7.118;VQSLOD=6.0396;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,39:42:99:1969,102,0	1/1:0,10:10:27.09:521,27,0	0/0:22,0:22:66.14:0,66,974	0/0:29,0:29:87.17:0,87,1190	1/1:1,28:28:66.23:1273,66,0	1/1:0,23:23:69.24:1332,69,0	1/1:0,20:20:57.20:1100,57,0	1/1:3,41:44:99:2253,123,0	1/1:0,18:19:48.16:927,48,0	1/1:0,30:30:90.31:1736,90,0	1/1:0,26:27:75.26:1448,75,0	1/1:0,28:30:81.28:1563,81,0	1/1:2,30:32:78.27:1500,78,0	1/1:0,30:30:78.27:1506,78,0	1/1:0,32:32:84.29:1622,84,0	1/1:0,22:22:57.20:1101,57,0	1/1:2,23:26:44.70:1085,45,0	1/1:1,6:7:15.52:290,16,0	1/1:3,17:19:48.13:849,48,0	1/1:1,34:35:87.30:1680,87,0	1/1:0,29:29:72.25:1390,72,0	1/1:0,27:28:54.19:1043,54,0	1/1:2,33:35:83.52:1621,84,0	1/1:4,28:33:75.26:1447,75,0	1/1:1,16:17:48.16:927,48,0	1/1:0,24:24:69.22:1287,69,0	1/1:4,33:38:99:1957,102,0	1/1:0,19:19:48.16:926,48,0
chr10	27644328	.	A	AT	23519.35	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-7.961;DP=594;FS=10.477;HRun=0;HaplotypeScore=56.7037;InbreedingCoeff=0.9936;MQ=97.70;MQ0=0;MQRankSum=-12.269;QD=43.96;ReadPosRankSum=7.094;VQSLOD=3.6977;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,42:43:99:1918,120,0	1/1:0,8:8:21.07:336,21,0	0/0:25,0:25:68.88:0,69,918	0/0:34,0:34:99:0,99,1332	1/1:2,21:23:63.21:1007,63,0	1/1:0,17:17:36.12:575,36,0	1/1:1,27:28:84.29:1342,84,0	1/1:3,28:31:84.29:1342,84,0	1/1:0,16:16:45.15:720,45,0	1/1:0,7:7:21.07:334,21,0	1/1:0,14:15:39.13:624,39,0	1/1:0,22:22:63.21:1007,63,0	1/1:0,17:17:51.17:815,51,0	1/1:0,19:19:48.16:768,48,0	1/1:1,27:28:66.23:1055,66,0	1/1:0,25:25:72.25:1151,72,0	1/1:1,19:20:54.18:863,54,0	1/1:0,9:9:21.07:336,21,0	1/1:1,20:21:60.18:933,60,0	1/1:1,27:28:72.25:1151,72,0	1/1:0,26:26:75.26:1199,75,0	1/1:0,18:18:54.18:863,54,0	1/1:1,18:19:54.18:863,54,0	1/1:0,18:18:51.17:815,51,0	1/1:0,12:12:36.12:576,36,0	1/1:0,25:25:75.26:1200,75,0	1/1:0,25:25:66.23:1055,66,0	1/1:0,15:15:41.83:671,42,0
chr10	27645124	.	A	ATG	1369.77	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-7.340;DP=703;FS=1.327;HRun=0;HaplotypeScore=87.4698;InbreedingCoeff=0.9399;MQ=71.19;MQ0=1;MQRankSum=-2.605;QD=35.12;ReadPosRankSum=-0.308;VQSLOD=5.7410;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:63.20:0,63,775	0/0:8,0:8:21.07:0,21,258	0/0:32,0:30:51.86:0,52,667	0/0:38,0:32:43.67:0,44,683	0/0:29,0:29:78.21:0,78,934	0/0:21,0:21:45.14:0,45,554	0/0:23,0:23:40.22:0,40,715	0/0:36,0:37:63.17:0,63,745	0/0:29,0:29:81.25:0,81,997	0/0:34,0:34:81.24:0,81,978	0/0:20,0:20:54.15:0,54,651	0/0:25,1:27:29.12:0,29,844	0/0:25,0:25:69.22:0,69,849	0/0:23,0:23:63.20:0,63,776	1/1:7,31:39:59.39:1465,59,0	0/0:21,0:21:57.16:0,57,689	0/0:25,0:25:54.13:0,54,636	0/0:7,0:7:9.03:0,9,111	0/0:12,0:12:27.07:0,27,321	0/0:29,0:29:78.22:0,78,936	0/0:32,0:34:80.92:0,81,950	0/0:21,0:21:48.15:0,48,591	0/0:22,0:22:60.17:0,60,725	0/0:23,0:23:57.18:0,57,702	0/0:26,0:27:69.03:0,69,803	0/0:25,0:25:63.18:0,63,763	0/0:32,0:32:84.25:0,84,1021	0/0:11,0:11:33.10:0,33,406
chr10	27646291	.	GT	G	455.85	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-6.036;DP=513;FS=1.802;HRun=8;HaplotypeScore=91.1034;InbreedingCoeff=0.7977;MQ=77.61;MQ0=0;MQRankSum=-0.911;QD=22.79;ReadPosRankSum=-0.848;VQSLOD=3.5066;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:51.10:0,51,587	0/0:13,0:13:36.11:0,36,435	0/0:13,0:13:20.99:0,21,215	0/0:13,0:14:26.23:0,26,227	0/0:28,0:28:78.23:0,78,930	0/0:26,0:26:75.23:0,75,906	0/0:12,0:12:36.09:0,36,422	0/0:22,0:22:60.18:0,60,725	0/0:9,1:10:1.17:0,1,297	0/0:28,0:28:66.20:0,66,795	0/0:29,0:29:78.24:0,78,942	0/0:11,0:11:27.08:0,27,326	0/0:20,0:20:57.13:0,57,669	0/0:13,0:13:33.10:0,33,399	1/1:1,19:20:57.09:550,57,0	0/0:20,0:20:57.17:0,57,689	0/0:15,1:16:16.51:0,17,467	0/0:9,0:9:27.04:0,27,309	0/0:24,0:24:60.16:0,60,704	0/0:22,0:22:57.17:0,57,679	0/0:11,0:11:30.09:0,30,362	0/0:25,0:25:66.19:0,66,787	0/0:25,0:25:72.22:0,72,869	0/0:8,0:8:21.05:0,21,242	0/0:16,0:16:39.11:0,39,462	0/0:22,0:22:60.18:0,60,716	0/0:24,0:24:57.17:0,57,685	0/0:13,0:13:39.12:0,39,471
chr10	27647249	.	T	TTTA	1227.52	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-5.144;DP=664;FS=5.173;HRun=0;HaplotypeScore=92.4130;InbreedingCoeff=0.9801;MQ=66.47;MQ0=1;MQRankSum=-0.310;QD=49.10;ReadPosRankSum=2.959;VQSLOD=5.8489;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,123,1971	0/0:8,0:8:24.06:0,24,351	0/0:24,0:18:22.31:0,22,658	0/0:25,0:22:43.02:0,43,856	0/0:35,0:35:92.73:0,93,1577	0/0:30,0:30:87.26:0,87,1363	0/0:25,0:25:75.25:0,75,1226	0/0:32,0:32:93.24:0,93,1392	0/0:19,0:19:51.16:0,51,812	0/0:28,0:28:75.23:0,75,1175	0/0:28,0:28:84.15:0,84,1226	0/0:20,0:20:60.19:0,60,945	0/0:26,0:26:78.26:0,78,1283	0/0:34,0:34:96.32:0,96,1586	1/1:0,25:25:60.21:1322,60,0	0/0:21,0:21:63.19:0,63,995	0/0:16,0:16:42.10:0,42,670	0/0:24,0:24:72.24:0,72,1186	0/0:36,0:35:99:0,99,1560	0/0:24,0:24:72.18:0,72,1041	0/0:12,0:12:36.11:0,36,572	0/0:19,0:19:54.14:0,54,789	0/0:22,0:22:63.14:0,63,941	0/0:16,0:16:48.15:0,48,787	0/0:11,0:11:33.11:0,33,547	0/0:28,0:28:81.23:0,81,1240	0/0:27,0:26:75.22:0,75,1185	0/0:7,0:7:15.32:0,15,241
chr10	27650271	.	A	AT	655.27	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-3.291;DP=474;FS=3.090;HRun=5;HaplotypeScore=81.8726;InbreedingCoeff=0.9580;MQ=84.44;MQ0=0;MQRankSum=-0.489;QD=26.21;ReadPosRankSum=2.102;VQSLOD=3.3797;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:54.13:0,54,573	0/0:11,0:11:30.08:0,30,322	0/0:15,0:15:19.15:0,19,244	0/0:18,0:18:44.72:0,45,424	0/0:25,0:25:69.17:0,69,742	0/0:18,0:18:51.13:0,51,548	0/0:11,0:11:30.07:0,30,322	0/0:29,0:29:76.98:0,77,797	0/0:10,0:10:30.08:0,30,322	0/0:13,0:13:36.09:0,36,386	0/0:25,0:25:75.19:0,75,806	0/0:11,0:11:33.08:0,33,355	0/0:14,0:14:39.10:0,39,419	0/0:16,0:16:45.11:0,45,483	1/1:1,24:25:57.19:750,57,0	0/0:13,0:13:33.08:0,33,354	0/0:9,0:9:24.06:0,24,258	0/0:9,0:9:11.77:0,12,129	0/0:18,0:18:39.08:0,39,412	0/0:27,0:27:78.18:0,78,829	0/0:13,0:13:39.10:0,39,419	0/0:11,0:11:30.07:0,30,322	0/0:17,0:17:42.10:0,42,451	0/0:13,0:13:36.09:0,36,386	0/0:18,0:18:51.13:0,51,548	0/0:23,0:23:66.16:0,66,703	0/0:24,0:24:72.16:0,72,765	0/0:19,0:19:57.14:0,57,612
chr10	27650979	.	C	CTGG	2186.05	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-8.117;DP=576;FS=1.476;HRun=0;HaplotypeScore=78.6976;InbreedingCoeff=0.9430;MQ=82.13;MQ0=0;MQRankSum=-2.226;QD=60.72;ReadPosRankSum=2.145;VQSLOD=5.0426;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:51.17:0,51,869	0/0:9,0:9:26.99:0,27,397	0/0:15,0:15:39.13:0,39,648	0/0:24,0:24:69.20:0,69,1128	0/0:39,0:39:99:0,111,1892	0/0:29,0:29:81.18:0,81,1289	0/0:14,0:14:39.13:0,39,665	0/0:31,0:31:93.28:0,93,1508	0/0:17,0:17:48.16:0,48,818	0/0:26,0:26:69.24:0,69,1176	0/0:25,0:25:72.19:0,72,1169	0/0:22,0:22:63.20:0,63,1048	0/0:28,0:28:84.29:0,84,1426	0/0:17,0:17:42.13:0,42,690	1/1:1,34:36:99:2281,99,0	0/0:23,0:23:69.11:0,69,1053	0/0:12,0:12:36.08:0,36,582	0/0:3,0:3:8.99:0,9,122	0/0:14,0:14:42.14:0,42,692	0/0:39,0:39:99:0,114,1890	0/0:14,0:14:42.14:0,42,716	0/0:20,0:20:51.13:0,51,824	0/0:19,0:19:54.15:0,54,867	0/0:12,0:12:36.08:0,36,583	0/0:23,0:23:69.19:0,69,1145	0/0:14,0:14:42.14:0,42,716	0/0:20,0:20:60.14:0,60,963	0/0:14,0:14:30.10:0,30,511
chr10	27652085	.	AG	A	19758.10	PASS	AB=0.636;AC=51;AF=0.911;AN=56;BaseQRankSum=0.010;DP=616;FS=1.412;HRun=3;HaplotypeScore=86.7347;InbreedingCoeff=0.7574;MQ=79.64;MQ0=0;MQRankSum=-9.070;QD=33.95;ReadPosRankSum=6.029;VQSLOD=4.8793;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,29:29:81.25:1004,81,0	1/1:0,9:9:24.08:297,24,0	0/0:14,0:14:42.10:0,42,572	0/0:20,0:20:54.17:0,54,736	1/1:0,25:25:72.23:889,72,0	1/1:0,30:30:75.24:930,75,0	1/1:0,24:24:66.21:818,66,0	1/1:0,28:28:84.25:1029,84,0	1/1:1,28:29:69.19:855,69,0	1/1:0,26:26:75.21:916,75,0	1/1:0,17:17:51.16:629,51,0	1/1:2,22:24:60.19:744,60,0	1/1:0,21:21:60.19:744,60,0	1/1:1,25:26:72.23:893,72,0	1/1:0,37:37:99:1228,99,0	1/1:0,17:17:45.14:558,45,0	1/1:1,32:33:93.29:1153,93,0	0/1:3,4:7:5.82:156,0,6	1/1:0,26:26:78.23:953,78,0	1/1:0,25:25:66.21:818,66,0	1/1:0,12:12:33.10:409,33,0	1/1:0,23:23:63.20:781,63,0	1/1:0,18:18:48.15:595,48,0	1/1:2,15:17:45.14:558,45,0	1/1:0,19:19:57.18:705,57,0	1/1:2,30:32:93.28:1135,93,0	1/1:1,26:27:75.23:925,75,0	1/1:0,1:1:3.01:37,3,0
chr10	27653062	.	TG	T	618.60	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.493;DP=512;FS=2.376;HRun=9;HaplotypeScore=51.4383;InbreedingCoeff=0.8769;MQ=77.45;MQ0=0;MQRankSum=-1.222;QD=19.95;ReadPosRankSum=2.357;VQSLOD=4.1525;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:33.10:0,33,380	0/0:13,0:13:27.08:0,27,312	0/0:18,0:18:32.86:0,33,318	0/0:10,0:11:15.18:0,15,160	0/0:22,0:23:62.99:0,63,687	0/0:25,1:26:41.80:0,42,734	0/0:19,1:21:35.56:0,36,643	0/0:28,0:28:63.13:0,63,694	0/0:13,0:13:39.09:0,39,430	0/0:23,0:23:63.19:0,63,727	0/0:25,0:25:63.19:0,63,727	0/0:11,0:11:30.09:0,30,346	0/0:26,0:26:63.19:0,63,727	0/0:15,0:15:45.12:0,45,509	1/1:3,28:31:78.04:713,78,0	0/0:20,1:21:26.69:0,27,561	0/0:18,0:18:51.11:0,51,573	0/0:2,0:2:6.02:0,6,69	0/0:15,0:15:36.11:0,36,415	0/0:23,1:24:32.71:0,33,627	0/0:13,0:13:33.10:0,33,381	0/0:19,0:19:51.14:0,51,576	0/0:24,0:24:60.14:0,60,677	0/0:17,0:17:45.13:0,45,518	0/0:17,0:17:45.13:0,45,515	0/0:15,0:15:39.07:0,39,435	0/0:26,0:26:72.20:0,72,822	0/0:5,0:5:15.04:0,15,173
chr10	27653781	.	T	TA	12920.96	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-5.610;DP=436;FS=0.969;HRun=7;HaplotypeScore=47.1922;InbreedingCoeff=0.8973;MQ=74.26;MQ0=0;MQRankSum=-6.771;QD=31.13;ReadPosRankSum=4.719;VQSLOD=4.3996;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,13:13:39.12:471,39,0	1/1:0,1:1:3.01:36,3,0	0/0:12,0:12:30.02:0,30,277	0/0:9,0:9:17.80:0,18,150	1/1:2,22:24:66.20:796,66,0	1/1:2,11:13:33.10:399,33,0	1/1:0,10:10:27.08:326,27,0	1/1:6,20:26:60.09:687,60,0	1/1:0,10:10:30.09:362,30,0	1/1:1,24:25:72.22:870,72,0	1/1:4,18:22:51.04:581,51,0	1/1:3,17:20:48.15:580,48,0	1/1:2,16:18:48.15:580,48,0	1/1:3,19:22:45.14:542,45,0	1/1:0,19:19:51.16:616,51,0	1/1:1,16:17:45.14:544,45,0	1/1:1,23:24:63.19:760,63,0	1/1:1,7:8:21.06:254,21,0	1/1:0,6:6:18.03:195,18,0	1/1:1,24:25:72.22:870,72,0	1/1:2,9:11:27.08:326,27,0	1/1:2,12:14:36.07:418,36,0	1/1:1,12:13:33.10:399,33,0	1/1:1,5:6:15.05:181,15,0	1/1:2,17:19:45.14:544,45,0	1/1:2,22:24:66.19:787,66,0	1/1:2,14:16:42.13:506,42,0	1/1:0,9:9:24.07:290,24,0
chr10	27655013	.	ATGTG	A	2658.56	PASS	AB=1.000;AC=41;AF=0.788;AN=52;BaseQRankSum=-4.582;DP=173;FS=13.431;HRun=0;HaplotypeScore=42.3700;InbreedingCoeff=0.0802;MQ=92.77;MQ0=0;MQRankSum=0.323;QD=19.84;ReadPosRankSum=0.531;VQSLOD=1.5433;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:7,0:6:4.62:43,0,5	1/1:2,0:2:6.02:97,6,0	0/0:14,0:14:29.79:0,30,462	0/0:9,0:7:7.89:0,8,244	./.	0/1:3,0:3:8.25:41,0,8	1/1:5,0:5:12.04:190,12,0	1/1:12,0:12:29.45:407,29,0	1/1:3,0:3:9.01:119,9,0	1/1:5,0:5:9.49:109,9,0	./.	1/1:6,0:6:6.02:97,6,0	0/1:7,0:7:3.28:132,0,3	1/1:7,0:7:12.04:193,12,0	1/1:8,0:8:3:25,3,0	0/1:5,0:5:3.15:133,0,3	0/1:17,0:17:68.69:193,0,69	1/1:4,0:4:5.99:69,6,0	1/1:6,0:6:5.92:89,6,0	1/1:10,0:10:10.22:276,10,0	1/1:3,0:3:3.01:47,3,0	1/1:5,0:5:9.02:118,9,0	1/1:4,0:4:6.01:73,6,0	1/1:3,0:3:9.01:118,9,0	0/1:2,0:2:8.27:42,0,8	1/1:2,0:2:3.01:51,3,0	1/1:4,0:4:6.02:95,6,0	0/1:4,0:4:8.20:42,0,8
chr10	27655043	.	A	AT	1088.75	PASS	AB=0.696;AC=30;AF=0.652;AN=46;BaseQRankSum=0.638;DP=117;FS=12.252;HRun=1;HaplotypeScore=40.2630;InbreedingCoeff=0.1717;MQ=60.64;MQ0=5;MQRankSum=0.236;QD=11.71;ReadPosRankSum=0.096;VQSLOD=0.2490;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,0:7:5.61:49,6,0	./.	0/0:4,0:2:3.01:0,3,38	0/0:5,0:3:3.44:0,3,20	0/0:3,0:3:3:0,3,25	1/1:3,1:5:5.92:39,6,0	1/1:2,0:2:6.02:80,6,0	0/1:9,5:10:48.78:258,0,49	1/1:2,0:2:3.01:40,3,0	0/1:3,1:4:13.94:14,0,32	./.	1/1:2,1:3:5.98:60,6,0	1/1:0,0:1:2.94:18,3,0	./.	0/0:1,0:1:3.01:0,3,38	1/1:4,0:5:14.89:113,15,0	0/1:11,5:20:99:150,0,113	1/1:1,1:2:3.01:45,3,0	1/1:2,2:4:8.87:110,9,0	1/1:4,0:5:2.96:19,3,0	./.	1/1:3,0:3:3:26,3,0	./.	0/0:1,0:1:3.01:0,3,38	1/1:3,2:6:8.92:78,9,0	1/1:4,0:4:6.02:76,6,0	0/0:4,0:4:3.01:0,3,36	0/1:1,1:5:28.51:53,0,29
chr10	27655111	.	C	CA	14836.30	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=8.828;DP=390;FS=17.369;HRun=0;HaplotypeScore=110.8402;InbreedingCoeff=0.8214;MQ=97.19;MQ0=0;MQRankSum=-10.532;QD=42.76;ReadPosRankSum=7.442;VQSLOD=2.6244;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:1,26:27:75.26:1196,75,0	1/1:1,1:2:3.01:48,3,0	0/0:24,0:24:72.24:0,72,1006	0/0:19,0:19:54.04:0,54,683	1/1:0,12:12:30.10:479,30,0	1/1:0,9:9:24.08:383,24,0	1/1:4,14:18:42.08:618,42,0	1/1:1,14:15:42.10:620,42,0	1/1:0,9:9:27.09:431,27,0	1/1:0,10:10:30.10:479,30,0	1/1:1,14:15:33.11:525,33,0	1/1:1,18:19:56.32:817,56,0	1/1:1,16:17:42.07:640,42,0	1/1:0,16:16:45.15:714,45,0	1/1:0,13:13:39.13:621,39,0	1/1:1,12:13:39.06:593,39,0	1/1:0,19:19:54.18:850,54,0	1/1:0,6:6:15.05:239,15,0	1/1:0,5:5:12.04:192,12,0	1/1:0,16:16:42.14:660,42,0	1/1:0,22:22:60.20:959,60,0	1/1:0,14:14:33.11:527,33,0	1/1:0,6:6:18.06:287,18,0	1/1:0,23:23:63.21:1006,63,0	1/1:0,12:11:36.12:564,36,0	1/1:0,14:14:42.14:671,42,0	1/1:0,14:14:42.14:671,42,0	1/1:0,1:1:3.01:48,3,0
chr10	27656316	.	CTT	C	22858.64	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=4.830;DP=580;FS=11.468;HRun=3;HaplotypeScore=131.2464;InbreedingCoeff=0.8975;MQ=82.72;MQ0=0;MQRankSum=-9.630;QD=42.10;ReadPosRankSum=5.445;VQSLOD=3.4684;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,18:18:39.13:597,39,0	1/1:0,5:5:12.04:184,12,0	0/0:22,0:22:56.94:0,57,967	0/0:15,0:15:42.14:0,42,773	1/1:2,40:42:99:1651,108,0	1/1:0,20:20:60.20:917,60,0	1/1:1,11:12:33.11:504,33,0	1/1:1,33:34:99:1514,99,0	1/1:0,20:20:57.19:872,57,0	1/1:4,30:34:90.27:1331,90,0	1/1:1,15:16:42.06:613,42,0	1/1:1,24:25:69.23:1054,69,0	1/1:2,30:32:90.31:1377,90,0	1/1:0,19:19:57.19:872,57,0	1/1:0,30:30:81.28:1239,81,0	1/1:1,18:19:54.18:826,54,0	1/1:0,8:8:21.07:322,21,0	1/1:0,6:6:18.06:275,18,0	1/1:1,17:18:51.13:735,51,0	1/1:0,27:27:81.21:1211,81,0	1/1:0,19:19:51.17:780,51,0	1/1:0,25:25:72.24:1099,72,0	1/1:2,22:24:66.22:1010,66,0	1/1:0,12:12:30.10:458,30,0	1/1:0,23:23:66.22:1010,66,0	1/1:0,22:22:66.21:984,66,0	1/1:1,31:32:90.31:1377,90,0	1/1:0,1:1:3.01:46,3,0
chr10	27657516	.	T	TC	197.59	PASS	AB=1.000;AC=4;AF=0.071;AN=56;BaseQRankSum=1.392;DP=405;FS=0.000;HRun=7;HaplotypeScore=107.1792;InbreedingCoeff=0.4692;MQ=55.69;MQ0=15;MQRankSum=-1.743;QD=2.91;ReadPosRankSum=-0.904;VQSLOD=-0.6005;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:13.18:0,13,319	0/0:6,0:6:12:0,12,109	0/1:32,0:12:1.48:1,0,179	0/1:23,0:7:1.03:1,0,101	0/0:10,0:10:27.02:0,27,251	0/0:11,0:11:24.02:0,24,225	0/0:13,0:13:36.02:0,36,334	0/0:16,0:16:23.97:0,24,228	0/0:16,0:16:39.05:0,39,374	0/0:19,0:19:51.08:0,51,492	0/0:10,0:10:21.02:0,21,202	0/0:15,0:14:36.05:0,36,346	0/0:21,0:20:51:0,51,473	0/0:18,0:16:33.02:0,33,318	0/0:16,0:15:42.05:0,42,399	0/0:10,0:10:9.01:0,9,87	1/1:4,9:13:24.07:290,24,0	0/0:6,0:5:6:0,6,58	0/0:7,0:7:21.03:0,21,202	0/0:11,0:11:15.02:0,15,145	0/0:20,0:18:33.04:0,33,318	0/0:8,0:7:6:0,6,58	0/0:14,0:14:33.05:0,33,318	0/0:21,0:20:45.07:0,45,434	0/0:19,0:19:27.04:0,27,260	0/0:15,0:15:36.05:0,36,347	0/0:9,0:9:24.04:0,24,231	0/0:5,0:5:9.01:0,9,87
chr10	27658594	.	T	TTCTA	4948.09	PASS	AB=0.833;AC=24;AF=0.500;AN=48;BaseQRankSum=-5.085;DP=596;FS=0.599;HRun=0;HaplotypeScore=101.0307;InbreedingCoeff=0.7686;MQ=66.07;MQ0=13;MQRankSum=0.540;QD=16.01;ReadPosRankSum=-1.890;VQSLOD=4.1916;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:20,4:24:21.03:380,21,0	0/0:10,0:10:12.03:0,12,156	./.	./.	0/0:31,0:31:30.10:0,30,450	0/0:19,0:19:21.06:0,21,295	0/0:15,0:15:15.03:0,15,202	./.	1/1:13,12:27:18.06:413,18,0	1/1:22,1:31:33.01:483,33,0	1/1:10,1:26:20.03:279,20,0	1/1:15,8:23:12.04:276,12,0	0/0:17,0:17:21.07:0,21,309	./.	0/0:9,0:16:14.91:0,15,117	1/1:21,13:36:27.09:621,27,0	0/0:21,0:21:21:0,21,285	0/1:14,0:14:47.82:48,0,148	1/1:18,6:23:15.05:332,15,0	1/1:15,11:27:27.09:608,27,0	1/1:13,4:18:9.03:207,9,0	0/0:9,0:9:3.01:0,3,45	0/0:23,0:23:30.05:0,30,382	0/0:15,0:15:15.05:0,15,225	0/1:14,14:26:23.90:393,0,24	1/1:10,8:17:27.08:562,27,0	0/0:29,0:29:30.10:0,30,448	1/1:4,8:12:15.05:345,15,0
chr10	27658787	.	TTTC	T	14789.66	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-3.607;DP=524;FS=3.242;HRun=0;HaplotypeScore=111.5731;InbreedingCoeff=0.8412;MQ=65.50;MQ0=4;MQRankSum=-3.646;QD=31.74;ReadPosRankSum=5.383;VQSLOD=5.3776;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,18:18:39.13:576,39,0	1/1:0,7:7:18.02:241,18,0	0/0:37,0:13:30.22:0,30,319	0/0:20,0:16:13.37:0,13,189	1/1:0,25:23:60.01:787,60,0	1/1:1,19:19:42.14:621,42,0	1/1:0,14:14:27.05:374,27,0	1/1:4,19:23:54.07:637,54,0	1/1:0,21:19:42.14:621,42,0	1/1:3,22:25:66.03:823,66,0	1/1:2,24:26:71.94:911,72,0	1/1:0,14:14:36.12:520,36,0	1/1:0,24:24:39.13:575,39,0	1/1:0,11:11:24.08:354,24,0	1/1:3,19:22:54.18:776,54,0	1/1:2,26:27:57.18:821,57,0	1/1:1,19:20:36.12:532,36,0	1/1:0,4:4:12.04:177,12,0	1/1:1,14:15:44.82:503,45,0	1/1:1,31:31:89.97:1150,90,0	1/1:0,7:7:6.02:89,6,0	1/1:4,13:17:39.04:510,39,0	1/1:0,8:8:21.07:305,21,0	1/1:4,11:15:45.04:580,45,0	1/1:0,24:24:57.11:816,57,0	1/1:0,19:19:57.14:780,57,0	1/1:2,23:23:44.98:666,45,0	1/1:0,2:2:3.01:44,3,0
chr10	27659208	.	TC	T	27837.20	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=0.088;DP=732;FS=0.000;HRun=1;HaplotypeScore=106.8933;InbreedingCoeff=0.9625;MQ=82.64;MQ0=0;MQRankSum=-10.822;QD=40.58;ReadPosRankSum=6.556;VQSLOD=4.1603;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,21:22:60.20:839,60,0	1/1:0,10:10:27.09:377,27,0	0/0:22,1:23:53.32:0,53,883	0/0:22,1:23:37.89:0,38,901	1/1:0,49:49:99:1970,141,0	1/1:0,32:32:96.32:1341,96,0	1/1:1,20:21:63.20:865,63,0	1/1:0,44:44:99:1824,132,0	1/1:2,33:35:99:1426,102,0	1/1:1,19:20:60.19:824,60,0	1/1:0,29:29:81.27:1132,81,0	1/1:1,30:31:90.30:1259,90,0	1/1:2,30:32:96.32:1342,96,0	1/1:1,31:32:96.32:1340,96,0	1/1:1,36:37:99:1551,111,0	1/1:0,30:30:90.30:1258,90,0	1/1:1,21:22:66.21:907,66,0	1/1:0,3:3:9.03:126,9,0	1/1:1,15:16:48.15:653,48,0	1/1:2,25:27:78.26:1090,78,0	1/1:0,28:28:81.23:1111,81,0	1/1:1,29:30:87.28:1200,87,0	1/1:1,13:14:39.13:543,39,0	1/1:0,36:36:96.23:1298,96,0	1/1:1,19:20:60.19:825,60,0	1/1:2,25:27:81.25:1103,81,0	1/1:1,33:34:99:1425,102,0	1/1:0,5:5:15.05:210,15,0
chr10	27659278	.	T	TG	27095.23	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-5.464;DP=702;FS=12.968;HRun=1;HaplotypeScore=91.9268;InbreedingCoeff=0.9304;MQ=85.78;MQ0=0;MQRankSum=-10.761;QD=41.68;ReadPosRankSum=6.216;VQSLOD=3.4228;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,21:21:60.20:899,60,0	1/1:2,3:5:12.04:175,12,0	0/0:32,0:32:86.77:0,87,1023	0/0:19,0:20:52.58:0,53,574	1/1:3,33:36:99:1457,99,0	1/1:0,35:35:99:1573,105,0	1/1:5,16:21:56.77:800,57,0	1/1:2,25:27:78.25:1142,78,0	1/1:1,24:25:72.24:1058,72,0	1/1:2,21:23:63.21:937,63,0	1/1:9,20:29:81.25:1163,81,0	1/1:1,31:32:90.30:1343,90,0	1/1:0,43:43:99:1798,120,0	1/1:2,33:35:96.33:1437,96,0	1/1:2,39:41:99:1642,111,0	1/1:0,36:37:99:1551,105,0	1/1:7,18:25:52.25:968,52,0	1/1:0,6:6:18.06:270,18,0	1/1:2,20:22:60.20:899,60,0	1/1:3,22:25:66.22:987,66,0	1/1:0,18:18:51.17:764,51,0	1/1:1,19:20:57.19:853,57,0	1/1:0,11:11:33.11:494,33,0	1/1:1,22:23:69.23:1032,69,0	1/1:1,32:33:96.33:1438,96,0	1/1:2,22:24:69.23:1027,69,0	1/1:1,30:31:87.29:1301,87,0	1/1:0,2:2:6.02:90,6,0
chr10	27659929	.	A	ACCTACAACGTCTATTGTT	6474.29	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-0.511;DP=607;FS=1.539;HRun=0;HaplotypeScore=277.2581;InbreedingCoeff=0.8360;MQ=95.01;MQ0=0;MQRankSum=-8.808;QD=223.25;ReadPosRankSum=2.108;VQSLOD=5.2315;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:48.14:0,48,2152	0/0:12,0:12:36.12:0,36,1745	0/0:33,0:33:78.70:0,79,3139	0/0:25,0:25:60.21:0,60,2567	0/0:23,0:23:66.23:0,66,3150	0/0:23,0:23:63.22:0,63,3097	0/0:9,0:9:24.08:0,24,1127	0/0:39,0:39:99:0,108,4643	0/0:19,0:19:54.19:0,54,2786	0/0:24,0:24:66.22:0,66,2896	0/0:31,0:31:87.30:0,87,4233	0/0:18,0:18:54.19:0,54,2531	0/0:15,0:15:45.15:0,45,2108	0/0:18,0:18:54.19:0,54,2547	1/1:16,13:29:81.23:6474,81,0	0/0:28,0:28:81.28:0,81,3831	0/0:17,0:17:51.18:0,51,2275	0/0:8,0:8:2.43:0,2,728	0/0:26,0:26:72.25:0,72,3204	0/0:36,0:36:99:0,99,4894	0/0:22,0:22:63.22:0,63,2963	0/0:17,0:17:51.14:0,51,2484	0/0:17,0:17:51.18:0,51,2387	0/0:8,0:8:24.07:0,24,1014	0/0:20,0:20:60.19:0,60,2827	0/0:35,0:35:99:0,105,5297	0/0:28,0:28:81.26:0,81,3948	0/0:10,0:10:30.10:0,30,1471
chr10	27662644	.	A	AG	19970.09	PASS	AB=1.000;AC=53;AF=0.946;AN=56;BaseQRankSum=-4.550;DP=509;FS=14.176;HRun=0;HaplotypeScore=86.3858;InbreedingCoeff=0.6341;MQ=69.81;MQ0=0;MQRankSum=-6.018;QD=39.94;ReadPosRankSum=3.765;VQSLOD=4.0407;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,16:16:42.14:623,42,0	1/1:0,7:7:21.07:313,21,0	0/0:9,0:9:16.57:0,17,83	0/1:14,0:14:38.65:122,0,39	1/1:0,29:29:74.92:1115,75,0	1/1:0,20:20:51.17:762,51,0	1/1:1,13:14:39.13:582,39,0	1/1:1,19:20:57.15:824,57,0	1/1:0,10:10:24.08:358,24,0	1/1:0,20:21:63.21:930,63,0	1/1:0,19:20:54.18:807,54,0	1/1:0,10:10:30.10:450,30,0	1/1:0,26:26:63.21:942,63,0	1/1:0,19:20:54.18:801,54,0	1/1:0,33:33:93.31:1382,93,0	1/1:0,15:17:42.14:625,42,0	1/1:0,14:14:42.14:624,42,0	1/1:0,12:13:39.13:582,39,0	1/1:2,21:23:66.17:954,66,0	1/1:0,26:27:78.26:1156,78,0	1/1:0,13:14:36.12:540,36,0	1/1:0,17:17:42.14:623,42,0	1/1:0,18:18:51.17:759,51,0	1/1:0,18:18:51.17:759,51,0	1/1:0,23:23:60.20:896,60,0	1/1:0,22:22:66.22:970,66,0	1/1:0,25:25:72.24:1072,72,0	1/1:0,9:9:27.09:401,27,0
chr10	27663173	.	AT	A	16438.15	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-0.453;DP=459;FS=9.259;HRun=1;HaplotypeScore=53.0592;InbreedingCoeff=0.9643;MQ=81.73;MQ0=0;MQRankSum=-7.888;QD=38.14;ReadPosRankSum=4.276;VQSLOD=4.8275;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,15:15:42.14:586,42,0	1/1:0,9:9:24.08:335,24,0	0/0:18,0:18:51.16:0,51,779	0/0:10,0:10:27.09:0,27,416	1/1:0,19:19:45.15:628,45,0	1/1:0,28:28:81.27:1131,81,0	1/1:0,12:12:30.10:419,30,0	1/1:0,42:42:99:1689,126,0	1/1:0,16:16:42.14:587,42,0	1/1:0,19:19:54.18:754,54,0	1/1:0,14:14:30.10:417,30,0	1/1:0,13:13:33.11:461,33,0	1/1:0,22:22:63.21:881,63,0	1/1:0,15:15:42.14:587,42,0	1/1:0,26:26:75.25:1046,75,0	1/1:0,19:19:54.18:755,54,0	1/1:0,23:23:63.21:881,63,0	1/1:0,13:13:33.11:461,33,0	1/1:0,15:15:45.13:590,45,0	1/1:0,15:15:39.13:541,39,0	1/1:0,8:8:21.07:294,21,0	1/1:0,6:6:12.04:168,12,0	1/1:0,5:5:12.04:167,12,0	1/1:0,18:18:51.17:713,51,0	1/1:0,16:16:39.13:545,39,0	1/1:0,15:15:45.15:628,45,0	1/1:0,19:19:57.19:797,57,0	1/1:0,9:9:27.09:377,27,0
chr10	27663274	.	CATAT	C	1650.54	PASS	AB=0.992;AC=37;AF=0.740;AN=50;BaseQRankSum=5.914;DP=292;FS=0.990;HRun=0;HaplotypeScore=119.0933;InbreedingCoeff=0.2531;MQ=58.60;MQ0=2;MQRankSum=-5.571;QD=6.88;ReadPosRankSum=2.708;VQSLOD=2.6401;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:7:2.09:0,2,7	1/1:3,0:3:1.25:3,1,0	0/0:8,0:4:5.15:0,5,25	0/0:13,0:5:0.47:0,0,1	1/1:15,0:15:15.77:132,16,0	1/1:18,0:18:19.97:122,20,0	1/1:7,0:7:5.44:27,5,0	0/1:41,0:41:99:281,0,171	1/1:9,0:9:11.82:87,12,0	1/1:9,0:9:13.28:66,13,0	1/1:7,0:7:8.88:59,9,0	1/1:5,0:5:4.48:21,4,0	./.	1/1:6,0:6:2.96:19,3,0	1/1:4,5:10:18.06:290,18,0	1/1:11,0:11:5.50:37,5,0	0/0:11,0:11:3.01:0,3,37	1/1:5,0:6:3.01:39,3,0	1/1:18,0:19:3.40:109,3,0	1/1:9,0:9:8.85:56,9,0	0/0:7,0:7:0:0,0,0	./.	1/1:10,0:10:11.93:110,12,0	./.	1/1:14,0:14:16.16:142,16,0	0/1:12,0:12:69.67:70,0,91	0/1:18,0:18:45.13:56,0,45	1/1:10,0:10:8.77:52,9,0
chr10	27663291	.	ATATATGTGTGTGTGTGTG	A	8713.34	PASS	AB=0.988;AC=33;AF=0.660;AN=50;BaseQRankSum=4.748;DP=268;FS=1.546;HRun=0;HaplotypeScore=160.1487;InbreedingCoeff=0.2216;MQ=48.95;MQ0=4;MQRankSum=-3.480;QD=41.89;ReadPosRankSum=4.808;VQSLOD=4.2511;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:5:2.56:0,3,8	1/1:5,0:5:3.01:78,3,0	0/0:11,0:4:1.28:0,1,59	0/0:10,0:1:0.47:0,0,1	1/1:13,1:15:17.86:609,18,0	1/1:15,1:16:27.09:848,27,0	1/1:3,0:3:6.02:180,6,0	0/1:44,0:42:99:1328,0,752	1/1:3,1:4:12.04:426,12,0	1/1:8,0:8:3.48:435,3,0	1/1:8,0:8:9.03:284,9,0	1/1:3,0:3:6.02:171,6,0	./.	1/1:5,0:5:3.01:95,3,0	0/0:15,0:15:10.14:0,10,2067	1/1:7,0:7:11.26:320,11,0	0/0:11,0:11:3.01:0,3,37	0/1:4,0:4:29.19:150,0,29	0/1:16,0:16:4.06:678,0,4	1/1:11,0:11:9.03:283,9,0	0/0:7,0:7:2.98:0,3,21	./.	1/1:5,2:7:12.04:504,12,0	./.	1/1:12,2:14:25.80:891,26,0	0/1:14,1:15:78.93:646,0,79	0/1:15,0:15:40.96:503,0,41	1/1:8,0:8:9.03:285,9,0
chr10	27663293	.	ATATGTGTGTGTGTGTG	A	11897.49	PASS	AB=0.708;AC=39;AF=0.780;AN=50;BaseQRankSum=0.812;DP=256;FS=0.000;HRun=0;HaplotypeScore=133.3976;InbreedingCoeff=0.3219;MQ=48.97;MQ0=5;MQRankSum=-1.673;QD=56.12;ReadPosRankSum=2.593;VQSLOD=4.4497;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,0:5:5.63:39,6,0	1/1:0,5:5:3.01:126,3,0	0/0:8,0:3:4:0,4,57	0/0:10,0:1:0:0,0,0	1/1:6,9:15:17.86:798,18,0	1/1:1,15:16:27.09:1196,27,0	1/1:0,3:3:6.02:275,6,0	0/1:10,31:39:99:1691,0,484	1/1:1,3:4:12.04:534,12,0	1/1:1,7:8:17.98:662,18,0	1/1:0,8:8:9.03:428,9,0	1/1:0,3:3:6.02:267,6,0	./.	1/1:2,3:5:3.01:143,3,0	0/0:15,0:15:31.68:0,32,2026	1/1:2,4:6:15.03:538,15,0	0/0:1,9:10:2.97:0,3,20	0/1:4,0:4:8.39:130,0,8	1/1:3,12:15:38.91:846,39,0	1/1:1,10:11:9.03:427,9,0	1/1:8,0:8:2.99:24,3,0	./.	1/1:2,4:6:12.04:528,12,0	./.	1/1:3,12:15:30.10:1181,30,0	0/1:3,12:15:20.93:817,0,21	1/1:0,11:11:18.06:818,18,0	1/1:1,7:8:9.03:429,9,0
chr10	27663295	.	ATGTGTGTGTGTGTG	A	9086.11	PASS	AB=1.000;AC=37;AF=0.881;AN=42;BaseQRankSum=1.723;DP=254;FS=0.000;HRun=0;HaplotypeScore=138.9335;InbreedingCoeff=0.4075;MQ=43.87;MQ0=6;MQRankSum=-2.191;QD=45.66;ReadPosRankSum=2.294;VQSLOD=4.5686;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	1/1:5,0:5:3.01:91,3,0	0/0:7,0:1:3.01:0,3,54	./.	1/1:13,2:15:17.86:605,18,0	1/1:16,0:16:27.09:896,27,0	1/1:3,0:3:6.02:222,6,0	0/1:41,0:39:99:1236,0,471	1/1:4,0:4:12.04:413,12,0	1/1:8,0:8:15.05:497,15,0	1/1:8,0:8:9.03:321,9,0	1/1:3,0:3:6.02:196,6,0	./.	1/1:5,0:5:3.01:107,3,0	0/0:17,0:17:41.73:0,42,2133	1/1:6,0:6:12.04:371,12,0	./.	1/1:3,1:4:3.01:119,3,0	1/1:14,0:15:24.02:708,24,0	1/1:11,0:11:9.03:320,9,0	./.	./.	1/1:6,0:6:12.04:429,12,0	./.	1/1:14,1:15:29.69:953,30,0	1/1:15,0:15:24.06:676,24,0	1/1:11,0:11:18.06:603,18,0	1/1:8,0:8:9.03:322,9,0
chr10	27663424	.	TATAC	T	9711.89	PASS	AB=0.538;AC=49;AF=0.907;AN=54;BaseQRankSum=-2.780;DP=259;FS=0.000;HRun=0;HaplotypeScore=51.2318;InbreedingCoeff=0.4290;MQ=70.73;MQ0=2;MQRankSum=-3.131;QD=39.97;ReadPosRankSum=1.765;VQSLOD=4.6226;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,7:7:15.05:284,15,0	1/1:1,5:6:6.02:114,6,0	0/0:7,0:6:10.17:0,10,46	0/0:8,0:4:0.01:0,0,14	1/1:1,15:16:36.12:674,36,0	1/1:1,19:20:39.13:734,39,0	1/1:4,1:5:15.01:190,15,0	1/1:2,38:40:99:1762,114,0	1/1:0,3:3:6.02:114,6,0	1/1:0,10:10:30.09:534,30,0	1/1:0,12:12:27.09:512,27,0	1/1:0,7:7:15.05:283,15,0	1/1:1,4:5:9.03:171,9,0	1/1:0,6:6:15.05:284,15,0	1/1:4,2:6:15.04:226,15,0	1/1:0,7:7:9.03:171,9,0	1/1:0,16:16:30.10:569,30,0	0/1:1,6:7:1.69:159,0,2	1/1:1,17:18:48.13:822,48,0	1/1:0,8:8:15.02:230,15,0	./.	1/1:0,4:4:6.02:114,6,0	1/1:0,2:2:3.01:41,3,0	1/1:0,1:1:3.01:57,3,0	1/1:1,7:8:18.06:336,18,0	1/1:1,9:10:27.08:480,27,0	1/1:1,11:12:33.11:624,33,0	1/1:0,6:6:12.04:228,12,0
chr10	27665867	.	CGTGTGTGTGTGTGTGTGT	C	20860.38	PASS	AB=0.734;AC=44;AF=0.815;AN=54;BaseQRankSum=7.612;DP=661;FS=6.575;HRun=0;HaplotypeScore=273.8855;InbreedingCoeff=0.3830;MQ=67.76;MQ0=8;MQRankSum=-3.900;QD=37.25;ReadPosRankSum=3.649;VQSLOD=2.8837;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:12,11:23:6.02:293,6,0	1/1:3,6:9:3.01:147,3,0	0/0:32,0:21:6.02:0,6,172	0/0:33,0:27:18.06:0,18,404	0/1:8,10:18:48.33:240,0,48	1/1:8,16:25:18.06:819,18,0	1/1:11,16:27:21.07:856,21,0	1/1:17,9:25:22.77:317,23,0	1/1:8,12:20:21.07:991,21,0	1/1:13,11:24:23.95:580,24,0	1/1:7,8:17:8.68:784,9,0	1/1:6,14:20:19.12:1453,19,0	1/1:3,20:25:29.74:1403,30,0	1/1:8,15:24:26.96:1132,27,0	0/0:21,0:35:21:0,21,855	1/1:12,20:32:28.64:1305,29,0	0/1:12,15:26:2.71:285,0,3	0/1:22,0:22:15.67:291,0,16	0/1:11,13:24:24.09:821,0,24	1/1:10,16:26:42.01:1830,42,0	1/1:15,10:25:3.01:147,3,0	1/1:7,19:26:1.52:1336,2,0	1/1:8,14:22:17.74:692,18,0	1/1:12,11:23:12.01:586,12,0	1/1:11,12:24:24.08:1037,24,0	1/1:9,17:26:51.13:1815,51,0	1/1:6,16:23:39.13:1702,39,0	./.
chr10	27666967	.	GTTGTATGTAACTCAAA	G	56733.84	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=10.213;DP=593;FS=1.071;HRun=0;HaplotypeScore=290.8150;InbreedingCoeff=0.8934;MQ=75.44;MQ0=0;MQRankSum=-12.049;QD=107.04;ReadPosRankSum=5.965;VQSLOD=4.0966;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,18:18:27.02:1034,27,0	1/1:0,13:13:33.11:1482,33,0	0/0:20,0:20:58.11:0,58,2911	0/0:20,0:20:54.17:0,54,2828	1/1:0,34:35:95.98:3630,96,0	1/1:0,24:24:54.19:2619,54,0	1/1:0,14:14:36.12:1715,36,0	1/1:0,32:32:92.92:2948,93,0	1/1:0,25:25:63.22:3076,63,0	1/1:0,25:25:69.19:3094,69,0	1/1:0,30:30:75.17:3340,75,0	1/1:0,24:24:60.21:2931,60,0	1/1:0,22:22:51.18:2472,51,0	1/1:0,27:27:75.26:3660,75,0	0/0:23,0:23:69.24:0,69,4939	1/1:0,18:18:39.13:1864,39,0	1/1:0,15:15:24.08:1172,24,0	1/1:0,2:2:3.01:147,3,0	1/1:0,10:10:30.01:971,30,0	1/1:0,29:29:69.15:3051,69,0	1/1:0,13:13:17.89:748,18,0	1/1:0,26:26:48.16:2344,48,0	1/1:0,28:28:66.23:3163,66,0	1/1:0,11:11:11.54:459,12,0	1/1:0,33:33:84.29:4060,84,0	1/1:0,27:27:81.26:3532,81,0	1/1:0,27:27:59.84:2930,60,0	1/1:0,2:2:6.02:293,6,0
chr10	27667391	.	TA	T	19847.75	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-2.399;DP=714;FS=0.836;HRun=6;HaplotypeScore=73.7128;InbreedingCoeff=0.9972;MQ=73.50;MQ0=0;MQRankSum=-7.800;QD=28.72;ReadPosRankSum=3.993;VQSLOD=5.4495;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,25:25:72.18:774,72,0	1/1:1,15:16:39.10:419,39,0	0/0:14,0:14:36.11:0,36,447	0/0:9,0:9:27.09:0,27,345	1/1:1,34:35:96.24:1032,96,0	1/1:1,25:26:75.19:806,75,0	1/1:1,16:17:42.11:451,42,0	1/1:5,46:51:99:1391,132,0	1/1:2,24:26:66.16:709,66,0	1/1:1,34:35:99:1088,102,0	1/1:1,29:30:84.21:903,84,0	1/1:2,19:21:57.14:613,57,0	1/1:5,40:45:99:1193,111,0	1/1:1,20:21:51.13:548,51,0	1/1:2,42:44:99:1258,117,0	1/1:2,24:26:72.18:774,72,0	1/1:2,14:16:42.10:451,42,0	1/1:2,9:11:24.06:258,24,0	1/1:1,22:23:66.15:700,66,0	1/1:2,34:36:99:1064,99,0	1/1:1,19:20:51.13:548,51,0	1/1:1,31:32:78.19:838,78,0	1/1:3,25:28:66.16:709,66,0	1/1:1,15:16:45.11:484,45,0	1/1:3,24:27:72.18:774,72,0	1/1:0,27:27:81.20:870,81,0	1/1:0,29:29:87.22:935,87,0	1/1:0,8:8:24.06:258,24,0
chr10	27670602	.	CTTTTT	C	9544.65	PASS	AB=0.665;AC=45;AF=0.804;AN=56;BaseQRankSum=-2.214;DP=595;FS=2.309;HRun=17;HaplotypeScore=121.2022;InbreedingCoeff=0.4626;MQ=64.00;MQ0=4;MQRankSum=-3.252;QD=18.57;ReadPosRankSum=4.052;VQSLOD=1.8745;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:12,14:26:0.63:249,0,1	1/1:3,5:9:17.41:211,17,0	0/0:37,0:22:28.89:0,29,411	0/0:20,0:10:9.68:0,10,102	1/1:5,16:25:40.26:500,40,0	1/1:5,14:19:10.94:469,11,0	1/1:9,10:20:17.64:255,18,0	1/1:15,14:31:40.04:489,40,0	1/1:5,5:10:11.84:180,12,0	0/1:10,9:19:0.24:278,0,0	1/1:13,17:31:21.26:465,21,0	1/1:6,13:19:23.55:332,24,0	1/1:7,13:21:29.88:435,30,0	1/1:9,15:26:16.02:459,16,0	0/0:10,0:22:7.84:0,8,200	1/1:4,18:25:57.02:810,57,0	1/1:5,11:16:23.88:361,24,0	0/1:6,8:14:34.03:250,0,34	0/1:5,3:9:6.87:150,0,7	1/1:14,18:35:52.62:717,53,0	1/1:10,15:25:14.58:266,15,0	1/1:8,11:20:23.42:316,23,0	1/1:6,12:18:17.54:311,18,0	1/1:3,4:7:5.90:90,6,0	1/1:13,14:28:40.68:614,41,0	1/1:8,14:24:43.65:603,44,0	1/1:10,17:27:38.03:525,38,0	0/1:5,5:10:5.69:208,0,6
chr10	27671716	.	C	CAA	26317.46	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-4.891;DP=691;FS=4.520;HRun=7;HaplotypeScore=94.7140;InbreedingCoeff=0.9956;MQ=64.05;MQ0=0;MQRankSum=-4.919;QD=40.55;ReadPosRankSum=5.067;VQSLOD=4.1440;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,33:39:99:1625,99,0	1/1:0,12:12:36.12:591,36,0	0/0:28,0:27:56.92:0,57,655	0/0:14,0:14:30.08:0,30,337	1/1:4,37:41:99:1622,102,0	1/1:2,22:25:66.23:1083,66,0	1/1:1,16:17:45.15:739,45,0	1/1:10,23:34:72.23:1157,72,0	1/1:1,21:22:57.19:935,57,0	1/1:4,22:26:66.21:1057,66,0	1/1:2,18:20:51.17:837,51,0	1/1:3,27:31:78.27:1280,78,0	1/1:2,14:16:45.11:709,45,0	1/1:2,19:21:51.17:837,51,0	1/1:5,27:32:69.24:1133,69,0	1/1:1,23:24:66.23:1083,66,0	1/1:2,25:27:63.22:1034,63,0	1/1:7,23:30:75.22:1193,75,0	1/1:1,16:17:48.13:751,48,0	1/1:2,27:29:78.23:1251,78,0	1/1:0,20:20:60.20:985,60,0	1/1:2,14:17:38.62:600,39,0	1/1:5,16:23:50.65:776,51,0	1/1:3,20:23:57.19:936,57,0	1/1:3,29:33:90.26:1447,90,0	1/1:3,26:31:84.24:1323,84,0	1/1:7,21:29:62.70:993,63,0	1/1:4,6:10:18.21:339,18,0
chr10	27672134	.	C	CT	16074.99	PASS	AB=1.000;AC=53;AF=0.946;AN=56;BaseQRankSum=-4.747;DP=535;FS=27.221;HRun=6;HaplotypeScore=70.5598;InbreedingCoeff=0.7051;MQ=67.19;MQ0=3;MQRankSum=-2.316;QD=30.91;ReadPosRankSum=3.397;VQSLOD=3.0488;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,35:43:99:1436,103,0	1/1:1,5:6:15.05:189,15,0	0/0:14,0:11:12.18:0,12,152	0/1:17,0:14:5.28:5,0,157	1/1:7,22:29:75.24:942,75,0	1/1:1,11:12:30.10:377,30,0	1/1:0,7:7:18.06:224,18,0	1/1:4,23:27:69.20:850,69,0	1/1:4,10:14:36.11:452,36,0	1/1:3,20:22:60.19:754,60,0	1/1:6,6:12:27.09:339,27,0	1/1:5,12:17:42.13:528,42,0	1/1:2,22:24:60.19:755,60,0	1/1:5,16:21:57.17:703,57,0	1/1:1,22:23:51.16:642,51,0	1/1:0,20:20:57.18:717,57,0	1/1:10,14:24:57.14:698,57,0	1/1:1,12:13:36.12:453,36,0	1/1:4,14:17:45.09:535,45,0	1/1:1,39:40:99:1418,117,0	1/1:0,11:11:27.09:340,27,0	1/1:3,13:16:36.12:453,36,0	1/1:1,12:13:24.08:302,24,0	1/1:1,7:8:18.06:226,18,0	1/1:2,24:26:63.20:793,63,0	1/1:1,20:21:60.19:755,60,0	1/1:6,19:25:69.18:849,69,0	1/1:0,10:10:27.09:340,27,0
chr10	27672313	.	A	AC	23960.59	PASS	AB=1.000;AC=53;AF=0.946;AN=56;BaseQRankSum=-7.802;DP=642;FS=2.494;HRun=1;HaplotypeScore=57.6335;InbreedingCoeff=0.6915;MQ=68.04;MQ0=1;MQRankSum=-6.606;QD=38.52;ReadPosRankSum=3.980;VQSLOD=5.4091;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,42:43:99:1624,102,0	1/1:0,4:4:6.02:96,6,0	0/1:13,0:13:3.81:4,0,335	0/0:20,0:19:44.18:0,44,564	1/1:0,16:16:42.14:671,42,0	1/1:0,16:16:45.15:719,45,0	1/1:1,30:31:81.27:1293,81,0	1/1:3,33:34:93.26:1394,93,0	1/1:1,16:17:39.13:624,39,0	1/1:0,17:17:51.17:811,51,0	1/1:2,15:17:39.13:623,39,0	1/1:0,34:34:87.30:1391,87,0	1/1:3,24:27:63.21:993,63,0	1/1:3,27:29:63.21:1007,63,0	1/1:2,24:26:63:1007,63,0	1/1:0,24:24:57.19:911,57,0	1/1:0,41:41:99:1726,108,0	1/1:2,21:23:53.85:814,54,0	1/1:0,13:12:33.11:525,33,0	1/1:0,23:23:57.19:887,57,0	1/1:1,51:50:99:1815,114,0	1/1:2,15:17:36.12:575,36,0	1/1:1,6:7:15.05:240,15,0	1/1:1,32:33:90.31:1438,90,0	1/1:0,18:17:51.17:815,51,0	1/1:0,20:20:60.20:953,60,0	1/1:0,21:21:54.18:863,54,0	1/1:0,3:3:9.03:144,9,0
chr10	27672878	.	G	GA	19791.68	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-4.500;DP=576;FS=0.000;HRun=4;HaplotypeScore=77.7784;InbreedingCoeff=0.9112;MQ=81.64;MQ0=0;MQRankSum=-8.485;QD=36.38;ReadPosRankSum=4.467;VQSLOD=4.7770;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,27:29:75.25:1026,75,0	1/1:0,10:10:30.10:410,30,0	0/0:23,0:23:30.68:0,31,498	0/0:9,0:9:24.01:0,24,243	1/1:2,29:31:84.28:1149,84,0	1/1:0,23:23:66.22:903,66,0	1/1:1,9:10:24.08:328,24,0	1/1:3,26:29:78.25:1052,78,0	1/1:2,12:14:36.12:493,36,0	1/1:1,28:29:84.26:1120,84,0	1/1:0,37:37:99:1428,105,0	1/1:1,12:13:30.10:410,30,0	1/1:2,28:30:81.27:1108,81,0	1/1:0,22:22:57.19:780,57,0	1/1:2,20:22:51.17:698,51,0	1/1:1,16:17:45.15:615,45,0	1/1:1,29:30:84.28:1149,84,0	1/1:1,18:19:51.17:697,51,0	1/1:3,18:21:57.19:779,57,0	1/1:1,29:30:84.28:1148,84,0	1/1:0,8:8:24.08:328,24,0	1/1:1,17:18:48.16:657,48,0	1/1:1,19:20:54.18:738,54,0	1/1:0,7:7:21.07:287,21,0	1/1:2,24:26:63.21:862,63,0	1/1:1,15:16:45.14:600,45,0	1/1:3,26:29:72.24:985,72,0	1/1:1,3:4:3.01:41,3,0
chr10	27673268	.	TGTGTGTGTGTGTGTGG	T	473.95	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=-4.511;DP=534;FS=6.259;HRun=0;HaplotypeScore=158.5192;InbreedingCoeff=-0.0667;MQ=49.97;MQ0=32;MQRankSum=-0.179;QD=2.13;ReadPosRankSum=-6.472;VQSLOD=-0.0880;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:3.01:0,3,80	0/0:5,0:5:6.02:0,6,190	1/1:22,0:7:7.06:35,7,0	0/1:35,0:12:7.92:8,0,61	0/0:22,0:21:3.01:0,3,64	0/0:22,0:21:3.90:0,4,68	0/0:17,0:16:16.84:0,17,404	0/1:28,0:25:99:105,0,785	0/0:15,0:15:3.48:0,3,80	0/1:12,0:12:30.84:31,0,375	0/0:21,0:20:6.02:0,6,158	0/1:18,0:17:96.34:96,0,453	0/0:23,0:23:6.44:0,6,160	0/0:25,0:24:16.77:0,17,1073	1/1:14,11:24:6.02:269,6,0	0/0:22,0:22:6.45:0,6,160	0/0:18,0:18:9.49:0,9,695	0/1:12,0:11:40.90:41,0,109	0/1:8,0:7:17.23:17,0,220	0/0:20,0:20:6.02:0,6,160	0/1:30,0:26:3.89:4,0,442	0/0:12,0:10:3.01:0,3,71	0/0:16,0:14:16.67:0,17,473	0/0:25,0:25:3.48:0,3,80	0/1:18,0:18:0.48:0,0,478	0/1:14,0:12:4.27:4,0,317	0/0:16,0:15:5.08:0,5,159	0/0:3,0:3:4.72:0,5,98
chr10	27673278	.	TGTGTGG	T	4279.87	PASS	AB=1.000;AC=53;AF=0.946;AN=56;BaseQRankSum=0.019;DP=534;FS=9.120;HRun=0;HaplotypeScore=101.9529;InbreedingCoeff=-0.0259;MQ=51.96;MQ0=30;MQRankSum=-0.386;QD=8.01;ReadPosRankSum=2.843;VQSLOD=2.4750;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:2,29:31:3.01:69,3,0	1/1:4,0:4:5.99:49,6,0	0/1:23,0:11:40.89:60,0,41	0/1:29,0:14:3.59:4,0,130	1/1:4,20:23:3.01:37,3,0	1/1:2,23:24:2.58:38,3,0	0/1:17,0:16:1.75:184,0,2	1/1:32,0:29:70.31:543,70,0	1/1:1,14:15:2.74:68,3,0	1/1:15,0:15:29.99:293,30,0	1/1:3,17:19:5.93:54,6,0	1/1:19,0:18:36.43:300,36,0	1/1:1,22:23:6.29:138,6,0	1/1:25,0:24:47.98:383,48,0	1/1:24,0:23:6.02:91,6,0	1/1:1,21:22:5.84:137,6,0	1/1:17,0:17:35.41:284,35,0	1/1:11,0:10:17.88:140,18,0	1/1:8,0:6:13.79:108,14,0	1/1:4,14:18:5.95:137,6,0	1/1:27,0:23:26.96:224,27,0	1/1:14,0:12:3.01:52,3,0	1/1:10,4:12:18.44:150,18,0	1/1:2,21:23:2.59:68,3,0	1/1:21,0:21:29.96:248,30,0	1/1:14,0:12:27.79:214,28,0	1/1:2,14:15:7.27:140,7,0	1/1:3,0:3:8.89:65,9,0
chr10	27673282	.	TGG	T	3909.37	PASS	AB=1.000;AC=54;AF=0.964;AN=56;BaseQRankSum=1.493;DP=512;FS=13.848;HRun=3;HaplotypeScore=86.9111;InbreedingCoeff=-0.0003;MQ=53.51;MQ0=30;MQRankSum=-1.860;QD=7.64;ReadPosRankSum=3.326;VQSLOD=-0.6736;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:29:2.99:23,3,0	1/1:5,0:5:8.98:73,9,0	0/1:24,0:14:66.38:66,0,123	0/1:27,0:15:4.72:5,0,159	1/1:22,0:21:2.92:17,3,0	1/1:25,0:24:2.94:18,3,0	1/1:17,0:16:30.74:232,31,0	1/1:5,25:27:79.30:581,79,0	1/1:15,0:15:2.99:24,3,0	1/1:1,15:16:32.98:284,33,0	1/1:19,0:18:5.85:34,6,0	1/1:20,0:19:38.95:325,39,0	1/1:22,0:22:5.97:46,6,0	1/1:26,0:25:51.74:410,52,0	1/1:17,0:16:5.88:35,6,0	1/1:21,0:21:5.98:45,6,0	1/1:17,0:17:38.85:309,39,0	1/1:10,0:9:17.93:142,18,0	1/1:9,0:7:19.23:161,19,0	1/1:16,0:16:5.97:45,6,0	1/1:22,0:18:26.97:224,27,0	1/1:3,11:12:2.92:17,3,0	1/1:15,0:13:20.97:173,21,0	1/1:23,0:23:2.77:22,3,0	1/1:20,0:20:32.96:273,33,0	1/1:12,0:10:25.98:209,26,0	1/1:16,0:15:7.53:50,8,0	1/1:3,0:3:8.93:67,9,0
chr10	27675904	.	GC	G	4516.36	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=4.027;DP=590;FS=11.259;HRun=9;HaplotypeScore=139.2680;InbreedingCoeff=0.8519;MQ=60.40;MQ0=13;MQRankSum=-4.511;QD=8.35;ReadPosRankSum=6.137;VQSLOD=1.7095;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:14:31.16:117,31,0	1/1:11,0:11:18.17:69,18,0	0/0:28,0:19:34.19:0,34,454	0/0:20,0:17:33.37:0,33,411	1/1:29,0:28:51.92:194,52,0	1/1:24,0:24:44.03:166,44,0	1/1:14,0:13:21.16:94,21,0	1/1:29,0:28:63.84:312,64,0	1/1:18,0:17:36.55:140,37,0	1/1:15,0:13:31.13:135,31,0	1/1:21,0:21:41.54:158,42,0	1/1:25,1:26:44.13:167,44,0	1/1:29,0:30:59.05:221,59,0	1/1:22,0:22:44.33:170,44,0	1/1:4,32:36:87.04:796,87,0	1/1:20,0:18:31.15:119,31,0	1/1:18,0:17:33.18:124,33,0	1/1:8,0:8:10.74:48,11,0	1/1:16,1:17:29.96:202,30,0	1/1:29,0:29:53.96:200,54,0	1/1:25,0:25:42.05:163,42,0	1/1:17,0:17:31.06:117,31,0	1/1:23,0:23:46.73:175,47,0	1/1:10,0:10:18.17:69,18,0	1/1:25,0:25:0.34:85,0,0	1/1:20,0:20:41.50:157,42,0	1/1:28,0:28:65.20:259,65,0	1/1:10,1:8:15.58:58,16,0
chr10	27675911	.	CCCA	C	17228.13	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=2.244;DP=588;FS=3.198;HRun=0;HaplotypeScore=114.0377;InbreedingCoeff=0.8189;MQ=60.67;MQ0=13;MQRankSum=-2.446;QD=34.05;ReadPosRankSum=3.915;VQSLOD=5.5124;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,17:17:36.12:574,36,0	1/1:0,10:10:21.07:334,21,0	0/0:26,0:17:1.25:0,1,743	0/0:21,0:17:6.64:0,7,735	1/1:1,30:30:63.16:974,63,0	1/1:0,24:24:51.17:811,51,0	1/1:2,13:14:24.07:377,24,0	1/1:2,27:28:78:1071,78,0	1/1:1,17:17:42.14:668,42,0	1/1:2,16:16:45.04:591,45,0	1/1:1,20:21:48.16:764,48,0	1/1:2,24:26:54.12:830,54,0	1/1:1,27:28:69.22:1075,69,0	1/1:0,22:22:54.13:831,54,0	0/0:35,0:35:87.39:0,87,677	1/1:2,16:16:36.12:574,36,0	1/1:2,16:17:42.06:613,42,0	1/1:0,6:6:11.99:162,12,0	1/1:2,16:18:47.85:525,48,0	1/1:2,24:25:66.18:1018,66,0	1/1:2,23:25:52.41:815,52,0	1/1:1,17:18:36.12:572,36,0	1/1:1,23:24:54.18:859,54,0	1/1:0,12:12:21.07:334,21,0	1/1:3,21:24:5.31:540,5,0	1/1:0,20:20:57.15:837,57,0	1/1:1,28:29:78.21:1191,78,0	1/1:3,6:6:18.06:287,18,0
chr10	27679372	.	A	AT	13503.41	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-8.729;DP=577;FS=20.476;HRun=9;HaplotypeScore=58.2631;InbreedingCoeff=0.9183;MQ=68.34;MQ0=0;MQRankSum=-2.618;QD=25.82;ReadPosRankSum=2.638;VQSLOD=3.6013;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,10:12:34.19:336,34,0	1/1:2,14:17:47.94:498,48,0	0/0:16,0:16:32.96:0,33,281	0/0:7,0:7:7.43:0,7,54	1/1:6,21:27:17.03:631,17,0	1/1:1,22:22:37.12:638,37,0	1/1:3,12:16:35.93:379,36,0	1/1:7,23:30:23.55:700,24,0	1/1:4,12:16:10.18:339,10,0	1/1:3,18:21:51.07:534,51,0	1/1:4,20:26:36.74:586,37,0	1/1:0,22:22:63.17:693,63,0	1/1:1,16:17:42.11:465,42,0	1/1:5,18:23:57.14:621,57,0	0/0:31,0:31:83.98:0,84,729	1/1:3,17:20:48.13:531,48,0	1/1:2,13:15:33.05:351,33,0	1/1:1,5:6:12.03:132,12,0	1/1:5,19:25:47.87:597,48,0	1/1:8,38:46:60.31:1082,60,0	1/1:1,8:9:15.04:166,15,0	1/1:2,25:27:66.18:730,66,0	1/1:2,17:19:46.37:501,46,0	1/1:0,13:13:33.09:365,33,0	1/1:4,21:25:63.17:697,63,0	1/1:2,26:28:78.21:863,78,0	1/1:2,24:27:48.93:737,49,0	1/1:3,10:13:10.03:331,10,0
chr10	27681007	.	GA	G	6236.49	PASS	AB=0.598;AC=47;AF=0.839;AN=56;BaseQRankSum=-0.785;DP=523;FS=0.826;HRun=13;HaplotypeScore=60.8855;InbreedingCoeff=0.2577;MQ=75.36;MQ0=1;MQRankSum=0.440;QD=12.52;ReadPosRankSum=5.288;VQSLOD=4.8415;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,14:17:29.82:219,30,0	0/1:1,5:6:6.96:92,0,7	0/0:12,0:13:7.82:0,8,65	0/0:10,1:10:4.77:0,5,24	1/1:4,14:22:44.85:302,45,0	1/1:5,19:29:14.48:387,14,0	1/1:2,9:13:27.93:187,28,0	0/1:12,16:29:24.50:297,0,24	1/1:9,11:20:8.60:217,9,0	1/1:5,13:20:42.82:296,43,0	1/1:9,14:24:37.75:268,38,0	1/1:2,11:14:28.87:203,29,0	1/1:11,20:33:57.73:406,58,0	1/1:4,13:19:35.14:249,35,0	1/1:5,20:28:59.79:411,60,0	1/1:3,14:19:33.89:231,34,0	1/1:5,19:27:50.80:346,51,0	1/1:1,9:10:10.35:121,10,0	0/1:6,10:17:18.25:167,0,18	1/1:10,13:26:22.71:275,23,0	1/1:1,1:3:5.02:28,5,0	1/1:3,7:13:20.97:127,21,0	1/1:3,14:19:45.82:318,46,0	0/1:4,7:13:4.27:118,0,4	1/1:3,13:17:13.27:237,13,0	1/1:9,12:24:35.81:235,36,0	1/1:2,17:19:47.69:350,48,0	0/1:6,8:16:12.39:150,0,12
chr10	27681163	.	GAA	G	14101.48	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-2.259;DP=549;FS=0.000;HRun=10;HaplotypeScore=97.3424;InbreedingCoeff=0.9716;MQ=61.88;MQ0=3;MQRankSum=-4.995;QD=27.98;ReadPosRankSum=0.923;VQSLOD=4.9097;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,18:18:51.14:569,51,0	1/1:2,11:13:30.08:334,30,0	0/0:12,0:12:26.05:0,26,300	0/0:10,0:11:26.51:0,27,334	1/1:4,29:33:81.19:903,81,0	1/1:1,23:24:69.18:769,69,0	1/1:0,16:16:39.11:435,39,0	1/1:4,30:34:87.21:961,87,0	1/1:0,9:9:27.07:301,27,0	1/1:2,29:31:87.21:960,87,0	1/1:2,22:24:57.15:635,57,0	1/1:3,15:18:39.10:435,39,0	1/1:3,27:30:78.20:868,78,0	1/1:2,20:22:54.13:602,54,0	0/0:0,0:22:52.40:0,52,180	1/1:1,8:9:24.06:268,24,0	1/1:1,22:23:51.14:569,51,0	1/1:1,3:4:9.02:100,9,0	1/1:2,17:19:51.12:559,51,0	1/1:0,16:16:45.12:501,45,0	1/1:0,11:11:27.07:301,27,0	1/1:2,17:19:45.11:501,45,0	1/1:5,30:34:81.20:903,81,0	1/1:1,21:22:54.14:602,54,0	1/1:5,19:23:51.12:568,51,0	1/1:1,19:19:54.10:588,54,0	1/1:4,21:25:63.16:702,63,0	1/1:0,5:5:15.04:167,15,0
chr10	27684472	.	T	TA	18777.93	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=0.260;DP=681;FS=6.571;HRun=1;HaplotypeScore=124.5059;InbreedingCoeff=0.9462;MQ=77.15;MQ0=1;MQRankSum=-6.322;QD=29.29;ReadPosRankSum=8.071;VQSLOD=3.8880;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,30:35:76.75:1018,77,0	1/1:0,12:12:33.10:397,33,0	0/0:23,0:23:33.08:0,33,680	0/0:17,0:16:21.85:0,22,357	1/1:3,30:33:90.95:1006,91,0	1/1:2,19:21:56.07:667,56,0	1/1:1,18:19:53.10:623,53,0	1/1:6,14:20:43.10:527,43,0	1/1:2,17:20:51.52:571,52,0	1/1:3,35:37:98.64:1161,99,0	1/1:2,22:24:63.13:731,63,0	1/1:4,17:21:44.59:519,45,0	1/1:2,22:24:70.08:801,70,0	1/1:5,23:27:59.62:782,60,0	1/1:0,33:32:78.22:890,78,0	1/1:5,23:28:70.13:820,70,0	1/1:0,23:23:57.17:670,57,0	1/1:3,22:25:57.95:698,58,0	1/1:4,10:14:33.41:395,33,0	1/1:3,27:30:79.07:917,79,0	1/1:1,14:15:39.80:494,40,0	1/1:9,20:29:62.16:772,62,0	1/1:7,29:36:89.87:1021,90,0	1/1:0,26:26:69.20:808,69,0	1/1:2,15:17:35.02:482,35,0	1/1:7,27:34:81.88:978,82,0	1/1:0,34:34:84.20:961,84,0	1/1:0,2:2:6.02:68,6,0
chr10	27684562	.	AGC	A	229.93	PASS	AB=0.964;AC=12;AF=0.214;AN=56;BaseQRankSum=1.280;DP=815;FS=3.689;HRun=0;HaplotypeScore=259.2326;InbreedingCoeff=-0.0929;MQ=86.40;MQ0=0;MQRankSum=-1.229;QD=0.76;ReadPosRankSum=-10.321;VQSLOD=-0.1836;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,1:41:66.42:0,66,281	0/0:16,0:16:34.64:0,35,127	0/0:31,0:31:92.90:0,93,1809	0/0:23,0:23:63.21:0,63,1236	0/0:38,0:38:74.62:0,75,236	0/1:25,3:28:78.81:79,0,93	0/1:30,0:30:5.32:5,0,96	0/1:27,0:27:21.31:42,0,21	0/0:24,0:24:40.88:0,41,119	1/1:43,0:43:0.56:76,1,0	0/0:27,0:27:17.57:0,18,123	0/0:33,0:33:4.43:0,4,107	0/0:40,0:40:18.22:0,18,172	0/1:34,1:35:8.65:9,0,137	0/0:32,0:32:94.84:0,95,1136	0/0:35,0:35:56.67:0,57,161	0/0:33,0:33:56.23:0,56,191	0/1:19,1:20:0.60:1,0,82	0/1:16,0:16:10.89:51,0,11	0/0:30,0:30:36.81:0,37,139	0/0:33,0:33:36.80:0,37,155	0/0:39,0:39:48.19:0,48,195	0/0:31,0:31:53.05:0,53,162	0/1:20,4:24:64.90:65,0,74	0/1:23,1:24:11.63:12,0,76	0/1:31,0:31:23.60:24,0,29	0/1:24,0:24:1.36:1,0,79	0/0:7,0:7:11.53:0,12,37
chr10	27685224	.	G	GA	735.77	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-1.187;DP=522;FS=2.718;HRun=6;HaplotypeScore=81.3530;InbreedingCoeff=0.7649;MQ=67.16;MQ0=9;MQRankSum=0.563;QD=22.99;ReadPosRankSum=1.704;VQSLOD=3.2005;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:51.11:0,51,520	0/0:8,0:8:24.04:0,24,237	0/0:25,0:19:16.41:0,16,345	0/0:19,0:15:16.55:0,17,208	0/0:21,0:21:60.14:0,60,612	0/0:24,0:24:63.09:0,63,622	0/0:7,0:7:15.03:0,15,153	0/0:22,0:21:48.09:0,48,485	0/0:20,0:20:57.13:0,57,581	0/0:22,0:22:63.13:0,63,635	0/0:26,0:26:77.53:0,78,764	0/0:18,0:18:51.12:0,51,520	0/0:26,0:26:75.17:0,75,764	0/0:14,0:14:39.08:0,39,393	1/1:4,28:32:66.21:830,66,0	0/0:10,0:10:27.06:0,27,275	0/0:17,0:17:40.08:0,40,369	0/0:18,0:18:45.10:0,45,458	0/0:18,0:16:42.09:0,42,428	0/0:26,0:26:69.14:0,69,698	0/0:13,0:13:30.04:0,30,293	0/0:20,0:20:60.12:0,60,605	0/0:21,0:21:60.12:0,60,602	0/0:6,0:6:18.04:0,18,183	0/0:21,0:21:63.14:0,63,642	0/0:16,0:16:45.10:0,45,459	0/0:23,0:22:60.12:0,60,605	0/0:8,0:8:0.33:0,0,162
chr10	27686952	.	T	TTA	158.78	PASS	AB=0.571;AC=1;AF=0.018;AN=56;BaseQRankSum=-2.782;DP=279;FS=10.730;HRun=0;HaplotypeScore=34.9621;InbreedingCoeff=-0.0343;MQ=75.74;MQ0=1;MQRankSum=-1.241;QD=19.85;ReadPosRankSum=1.545;VQSLOD=2.4832;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:8:12.04:0,12,152	0/0:2,0:2:6.02:0,6,76	0/0:8,0:5:5.91:0,6,51	0/0:15,0:9:16.20:0,16,136	0/0:7,0:7:15.05:0,15,191	0/0:11,0:11:27.09:0,27,344	0/0:4,0:4:12.02:0,12,138	0/0:37,0:37:81.23:0,81,995	0/0:9,0:9:27.09:0,27,343	0/0:6,0:6:15.05:0,15,191	0/0:11,0:11:27.09:0,27,343	0/0:6,0:6:15.05:0,15,191	0/0:4,0:4:6.02:0,6,76	0/0:7,0:7:12.02:0,12,139	0/1:2,6:8:20.13:233,0,20	0/0:6,0:6:12.04:0,12,153	0/0:20,0:20:38.88:0,39,562	0/0:14,0:14:36.08:0,36,441	0/0:18,0:18:39.12:0,39,496	0/0:8,0:8:18.06:0,18,228	0/0:6,0:6:9.03:0,9,115	0/0:10,0:10:12.04:0,12,152	0/0:7,0:7:12.04:0,12,152	0/0:5,0:5:12.04:0,12,152	0/0:11,0:11:24.08:0,24,305	0/0:8,0:8:15.05:0,15,191	0/0:12,0:12:30.10:0,30,381	0/0:11,0:11:30.10:0,30,382
chr10	27688328	.	CGTGT	C	3944.41	PASS	AB=0.822;AC=44;AF=0.846;AN=52;BaseQRankSum=-1.963;DP=651;FS=6.259;HRun=0;HaplotypeScore=110.9463;InbreedingCoeff=-0.0664;MQ=57.69;MQ0=42;MQRankSum=1.797;QD=7.39;ReadPosRankSum=0.020;VQSLOD=1.7765;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:18,9:28:1.81:173,2,0	0/0:7,1:11:2.74:0,3,12	./.	./.	0/1:10,7:19:3.55:85,0,4	1/1:17,0:22:15.03:171,15,0	0/1:15,8:25:34.11:192,0,34	1/1:22,0:20:1.25:15,1,0	1/1:17,6:25:5.87:74,6,0	1/1:16,7:22:17.84:245,18,0	1/1:12,0:12:2.67:11,3,0	1/1:11,7:20:18.04:240,18,0	1/1:10,4:13:14.84:233,15,0	1/1:16,4:23:8.95:143,9,0	1/1:18,1:20:11.94:136,12,0	1/1:13,11:25:30.07:407,30,0	1/1:15,7:24:11.30:166,11,0	0/1:19,0:21:20.09:20,0,36	1/1:13,0:16:5.92:55,6,0	1/1:9,4:13:17.72:225,18,0	0/1:31,3:34:7.58:128,0,8	1/1:15,2:18:2.50:141,2,0	1/1:12,6:17:17.42:241,17,0	0/1:18,14:36:23.82:393,0,24	1/1:20,4:24:12.04:186,12,0	0/1:25,0:25:35.34:81,0,35	1/1:14,3:17:8.50:138,9,0	1/1:7,1:7:3.01:47,3,0
chr10	27689207	.	CACACA	C	2673.64	PASS	AB=0.939;AC=40;AF=0.714;AN=56;BaseQRankSum=2.885;DP=602;FS=43.490;HRun=0;HaplotypeScore=105.6815;InbreedingCoeff=0.0872;MQ=51.05;MQ0=109;MQRankSum=3.260;QD=5.07;ReadPosRankSum=6.712;VQSLOD=-0.1076;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:27,1:21:25.20:90,0,25	1/1:11,1:12:8.64:103,9,0	0/0:25,0:8:5.22:0,5,245	0/0:26,0:11:32.17:0,32,318	0/1:31,3:31:56.47:170,0,56	0/1:31,0:31:52.04:131,0,52	0/1:26,2:24:64.66:65,0,101	1/1:36,0:27:38.01:764,38,0	1/1:15,0:12:10.07:41,10,0	1/1:11,1:8:13.12:167,13,0	0/1:12,0:5:32.95:33,0,34	0/1:11,2:13:15.76:87,0,16	1/1:21,0:16:8.20:49,8,0	1/1:23,0:19:13.17:106,13,0	0/0:24,0:24:63.21:0,63,1180	1/1:25,0:21:9.96:41,10,0	1/1:18,0:12:7.51:31,8,0	0/1:17,0:15:1.16:1,0,125	1/1:13,0:12:26.67:327,27,0	1/1:12,1:8:8.07:90,8,0	0/1:39,0:28:52.02:52,0,64	1/1:12,0:10:7.68:31,8,0	1/1:19,0:18:17.85:97,18,0	0/1:20,0:20:12.07:64,0,12	0/1:24,0:20:14.17:49,0,14	1/1:18,0:12:22.90:185,23,0	1/1:20,0:15:12.86:52,13,0	1/1:9,0:3:5.19:20,5,0
chr10	27689209	.	CACA	C	8264.57	PASS	AB=0.694;AC=46;AF=0.821;AN=56;BaseQRankSum=-0.427;DP=602;FS=12.724;HRun=0;HaplotypeScore=77.2296;InbreedingCoeff=0.3663;MQ=52.27;MQ0=110;MQRankSum=0.794;QD=15.77;ReadPosRankSum=4.154;VQSLOD=3.5305;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:12,14:20:21.07:330,21,0	1/1:3,10:12:17.41:254,17,0	0/0:26,0:8:2.21:0,2,207	0/0:27,0:12:35.18:0,35,345	1/1:7,26:30:6.66:459,7,0	1/1:7,24:29:28.48:459,28,0	0/1:10,19:24:32.76:516,0,33	1/1:14,24:27:47.45:805,47,0	1/1:4,11:12:11.95:223,12,0	1/1:5,7:8:18.06:271,18,0	0/1:12,0:5:28.19:71,0,28	1/1:7,9:14:12.95:236,13,0	1/1:7,15:17:9.02:140,9,0	1/1:5,18:19:35.61:575,36,0	0/0:25,0:25:66.11:0,66,984	1/1:4,21:21:11.83:223,12,0	1/1:9,9:12:9:168,9,0	0/1:6,9:12:36.52:100,0,37	1/1:3,13:14:30.03:376,30,0	1/1:7,6:8:9.03:148,9,0	0/1:15,23:28:37.79:234,0,38	1/1:4,8:9:8.91:168,9,0	1/1:3,17:18:41.73:732,42,0	1/1:5,18:21:12.30:478,12,0	1/1:6,18:21:21.68:398,22,0	1/1:7,10:11:30:510,30,0	1/1:5,15:15:14.93:279,15,0	1/1:5,3:3:6.02:111,6,0
chr10	27691576	.	C	CA	14870.56	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-8.176;DP=661;FS=5.188;HRun=9;HaplotypeScore=63.2788;InbreedingCoeff=0.8321;MQ=63.67;MQ0=8;MQRankSum=-2.242;QD=24.95;ReadPosRankSum=0.480;VQSLOD=5.6683;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,33:37:76.14:1042,76,0	1/1:3,9:12:4.03:272,4,0	0/0:26,0:15:15.63:0,16,234	0/0:13,0:11:12.44:0,12,217	1/1:4,28:32:72.15:783,72,0	1/1:2,23:25:69.19:763,69,0	1/1:8,27:35:3.14:718,3,0	1/1:9,22:24:57.61:621,58,0	1/1:2,17:20:44.95:479,45,0	1/1:2,22:24:60.16:664,60,0	1/1:7,18:25:45.12:498,45,0	1/1:4,16:22:55.06:562,55,0	1/1:3,24:27:37.11:638,37,0	1/1:3,21:24:57.15:631,57,0	0/0:25,0:24:65.98:0,66,573	1/1:2,25:27:49.15:770,49,0	1/1:5,20:25:60.16:662,60,0	1/1:4,17:22:47.96:512,48,0	1/1:4,19:23:22.05:462,22,0	1/1:2,28:30:75.12:803,75,0	1/1:2,10:12:30.08:332,30,0	1/1:1,16:17:48.05:504,48,0	1/1:3,19:21:25.97:507,26,0	1/1:2,14:15:16.06:405,16,0	1/1:3,18:21:51.14:564,51,0	1/1:5,24:29:75.02:801,75,0	1/1:3,23:26:34.11:604,34,0	1/1:2,9:11:4.03:273,4,0
chr10	27691963	.	GGGGGAA	G	8629.72	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=2.717;DP=314;FS=0.000;HRun=0;HaplotypeScore=75.1564;InbreedingCoeff=0.6357;MQ=58.51;MQ0=3;MQRankSum=-5.781;QD=31.38;ReadPosRankSum=1.699;VQSLOD=4.4406;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,12:18:21.07:436,21,0	1/1:2,3:5:6.02:129,6,0	0/0:8,0:4:2.49:0,2,52	0/0:14,0:7:9.97:0,10,104	1/1:2,21:21:29.97:525,30,0	1/1:2,7:9:21.07:452,21,0	1/1:3,6:8:12.04:258,12,0	1/1:6,16:21:42.05:600,42,0	1/1:0,11:11:24.08:516,24,0	1/1:1,5:6:15.02:279,15,0	1/1:4,14:18:24.08:500,24,0	1/1:1,12:13:36.04:680,36,0	1/1:1,10:11:27.09:565,27,0	1/1:2,7:9:21.07:452,21,0	0/0:16,0:16:33.09:0,33,957	1/1:1,4:5:6.02:129,6,0	1/1:2,6:8:9.03:194,9,0	1/1:6,7:13:10.28:174,10,0	1/1:2,5:6:12.01:199,12,0	1/1:0,11:11:20.96:360,21,0	1/1:4,14:18:6.02:113,6,0	1/1:0,5:5:8.86:194,9,0	1/1:3,7:6:8.97:178,9,0	1/1:6,3:9:3.01:65,3,0	1/1:1,14:15:27.02:534,27,0	1/1:1,6:7:17.96:259,18,0	1/1:0,12:12:36.12:775,36,0	1/1:0,1:1:3.01:65,3,0
chr10	27693709	.	C	CT	16907.89	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-9.141;DP=608;FS=0.000;HRun=7;HaplotypeScore=52.1296;InbreedingCoeff=0.9891;MQ=78.15;MQ0=0;MQRankSum=-4.122;QD=30.57;ReadPosRankSum=3.878;VQSLOD=4.7581;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,16:19:42.13:507,42,0	1/1:0,11:11:33.10:399,33,0	0/0:15,0:15:34.58:0,35,312	0/0:13,0:13:16.41:0,16,167	1/1:1,30:31:81.16:946,81,0	1/1:1,15:16:39.12:471,39,0	1/1:1,17:18:51.16:616,51,0	1/1:5,15:20:45.05:499,45,0	1/1:0,20:20:54.17:652,54,0	1/1:1,25:26:75.21:892,75,0	1/1:5,24:29:69.21:833,69,0	1/1:1,22:23:63.19:761,63,0	1/1:2,15:17:42.13:507,42,0	1/1:3,16:19:39.12:470,39,0	0/0:27,0:27:81.12:0,81,777	1/1:2,20:23:57.04:667,57,0	1/1:2,13:15:33.10:397,33,0	1/1:2,14:16:36.11:435,36,0	1/1:4,19:23:57.17:679,57,0	1/1:0,36:36:99:1237,105,0	1/1:3,14:17:42.13:507,42,0	1/1:4,22:26:69.15:803,69,0	1/1:5,22:27:63.19:761,63,0	1/1:0,9:9:24.07:290,24,0	1/1:2,24:26:69.21:834,69,0	1/1:1,38:39:99:1368,114,0	1/1:5,35:41:99:1195,99,0	1/1:1,5:6:15.05:181,15,0
chr10	27695088	.	GTTA	G	202.98	PASS	AB=0.832;AC=5;AF=0.089;AN=56;BaseQRankSum=6.181;DP=571;FS=16.471;HRun=0;HaplotypeScore=144.4843;InbreedingCoeff=-0.0939;MQ=75.36;MQ0=0;MQRankSum=-6.819;QD=1.88;ReadPosRankSum=0.678;VQSLOD=1.8526;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:51.18:0,51,1255	0/1:8,5:13:56.13:56,0,517	0/0:15,0:15:45.15:0,45,1062	0/0:21,0:22:60.21:0,60,1414	0/0:29,2:31:53.49:0,53,1704	0/0:30,0:30:90.31:0,90,2108	0/0:21,0:21:63.22:0,63,1508	0/0:37,0:37:99:0,111,2698	0/0:22,0:22:66.23:0,66,1619	0/1:22,6:28:99:221,0,1513	0/1:11,2:13:4.42:4,0,740	0/0:16,0:16:45.15:0,45,1074	0/0:18,0:18:51.17:0,51,1122	0/0:12,0:12:36.12:0,36,882	0/0:19,0:19:57.20:0,57,1365	0/0:15,0:15:42.14:0,42,999	0/0:16,0:16:48.16:0,48,1145	0/0:7,0:7:18.06:0,18,443	0/0:13,0:13:39.13:0,39,902	0/0:33,1:34:66.31:0,66,2297	0/0:16,0:16:48.16:0,48,1175	0/0:19,2:21:2.03:0,2,1238	0/1:24,5:29:23.60:24,0,1577	0/0:9,0:9:24.08:0,24,590	0/1:22,3:25:2.49:2,0,1518	0/0:34,1:35:51.74:0,52,2422	0/0:31,0:31:87.30:0,87,2140	0/0:5,0:5:15.05:0,15,370
chr10	27696332	.	G	GTTTC	17008.30	PASS	AB=0.726;AC=25;AF=0.446;AN=56;BaseQRankSum=4.756;DP=716;FS=28.792;HRun=0;HaplotypeScore=235.1149;InbreedingCoeff=-0.7180;MQ=48.93;MQ0=0;MQRankSum=-9.376;QD=27.08;ReadPosRankSum=-1.390;VQSLOD=3.0494;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:13,19:32:3.41:1022,0,3	0/1:5,9:14:5.35:597,0,5	0/0:32,0:27:35.19:0,35,637	0/0:37,0:30:44.86:0,45,910	0/1:21,25:46:99:1287,0,127	0/1:13,12:25:35.83:825,0,36	0/1:10,3:13:50.83:262,0,51	0/1:36,2:35:99:411,0,209	0/1:12,15:27:26.46:929,0,26	0/1:21,7:28:43.99:808,0,44	0/1:12,12:24:53.48:785,0,53	0/1:10,10:20:48:655,0,48	0/1:16,13:29:17.67:955,0,18	0/1:14,10:24:61.66:779,0,62	0/0:18,0:18:54.04:0,54,809	0/1:17,17:34:99:1083,0,168	0/1:13,8:21:98.71:538,0,99	0/1:10,4:14:66.41:333,0,66	0/1:24,4:27:99:347,0,106	0/1:12,16:28:74.63:963,0,75	0/1:13,2:15:73.33:102,0,73	0/1:11,9:20:29.97:639,0,30	0/1:14,9:23:22.43:580,0,22	0/1:12,9:21:0.06:536,0,0	0/1:11,8:19:77.01:523,0,77	0/1:21,8:29:74.12:685,0,74	0/1:29,17:46:99:1129,0,252	0/1:7,3:10:28.50:235,0,28
chr10	27696336	.	G	GT	7837.86	PASS	AB=0.647;AC=25;AF=0.446;AN=56;BaseQRankSum=2.410;DP=718;FS=29.255;HRun=3;HaplotypeScore=218.8900;InbreedingCoeff=-0.8063;MQ=48.97;MQ0=0;MQRankSum=-8.632;QD=12.38;ReadPosRankSum=5.814;VQSLOD=1.4226;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:11,22:33:99:440,0,106	0/1:5,9:14:69.99:210,0,70	0/0:32,0:25:57.85:0,58,643	0/0:35,0:28:43.57:0,44,667	0/1:22,27:49:99:636,0,363	0/1:8,16:24:99:398,0,139	0/1:5,8:13:99:203,0,107	0/1:25,11:33:99:370,0,602	0/1:8,18:27:99:307,0,204	0/1:14,15:29:99:480,0,248	0/1:12,12:24:99:278,0,174	0/1:9,11:20:99:224,0,156	0/1:6,21:27:99:384,0,104	0/1:14,11:25:99:284,0,185	0/0:18,0:18:45.14:0,45,539	0/1:16,19:35:99:456,0,352	0/1:10,12:22:99:211,0,234	0/1:8,6:14:99:144,0,138	0/1:16,8:23:99:289,0,284	0/1:11,19:30:99:442,0,164	0/1:9,11:20:69.82:70,0,177	0/1:7,14:21:88.57:258,0,89	0/1:9,15:24:99:257,0,151	0/1:6,15:21:28.54:281,0,29	0/1:8,11:19:99:182,0,164	0/1:18,9:27:99:404,0,235	0/1:24,19:43:99:498,0,524	0/1:5,7:12:80.87:130,0,81
chr10	27697393	.	CT	C	10548.38	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-5.647;DP=602;FS=4.560;HRun=10;HaplotypeScore=75.3878;InbreedingCoeff=0.9762;MQ=74.55;MQ0=1;MQRankSum=-3.510;QD=19.28;ReadPosRankSum=5.834;VQSLOD=5.4347;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,22:27:45.41:530,45,0	1/1:1,4:5:12:104,12,0	0/0:29,0:20:38.71:0,39,367	0/0:24,1:19:17.87:0,18,169	1/1:7,32:39:89.96:781,90,0	1/1:7,24:31:65.97:573,66,0	1/1:1,12:13:32.99:287,33,0	1/1:6,19:24:50.90:433,51,0	1/1:2,21:23:59.99:521,60,0	1/1:7,25:32:74.95:647,75,0	1/1:2,24:26:62.96:545,63,0	1/1:4,10:14:26.99:234,27,0	1/1:2,15:17:41.99:365,42,0	1/1:2,18:21:41.03:345,41,0	1/1:6,18:24:44.96:391,45,0	1/1:0,17:17:47.99:417,48,0	1/1:2,22:24:47.98:417,48,0	1/1:6,8:14:23.97:208,24,0	1/1:4,21:26:65.01:553,65,0	1/1:6,18:24:53.96:468,54,0	1/1:1,11:12:29.99:260,30,0	1/1:0,16:16:44.99:390,45,0	1/1:3,23:26:53.98:469,54,0	1/1:3,10:13:23.98:208,24,0	1/1:4,20:24:47.99:417,48,0	1/1:4,16:20:47.95:412,48,0	1/1:3,19:22:38.98:339,39,0	1/1:3,9:12:26.99:234,27,0
chr10	27706787	.	TC	T	2562.07	PASS	AC=46;AF=0.958;AN=48;BaseQRankSum=-1.495;DP=154;FS=15.623;HRun=3;HaplotypeScore=31.4265;InbreedingCoeff=0.1586;MQ=42.61;MQ0=6;MQRankSum=-1.732;QD=18.98;ReadPosRankSum=1.685;VQSLOD=1.8941;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,4:4:3.01:37,3,0	./.	1/1:6,5:1:2.90:16,3,0	0/0:12,4:3:2.79:0,3,26	1/1:0,7:7:6.02:74,6,0	1/1:0,5:5:12.04:148,12,0	1/1:0,7:7:18.06:223,18,0	1/1:1,7:7:18.06:223,18,0	1/1:0,7:6:15.05:186,15,0	1/1:0,8:8:24.08:297,24,0	1/1:0,5:3:3.01:37,3,0	1/1:0,4:4:6.02:74,6,0	1/1:0,6:3:6.02:74,6,0	1/1:0,4:4:12.04:148,12,0	1/1:0,7:6:9.03:111,9,0	1/1:0,7:5:12.04:149,12,0	./.	./.	1/1:1,3:3:6.02:74,6,0	1/1:0,10:7:15.05:186,15,0	./.	1/1:0,6:5:9.03:111,9,0	1/1:0,5:3:3.01:37,3,0	1/1:0,2:2:3.01:37,3,0	1/1:0,1:1:3.01:37,3,0	1/1:0,9:5:15.05:186,15,0	1/1:0,6:4:9.03:111,9,0	1/1:0,2:2:6.02:74,6,0
chr10	27707627	.	ATGTG	A	7491.61	PASS	AB=0.733;AC=50;AF=0.926;AN=54;BaseQRankSum=-1.112;DP=637;FS=0.000;HRun=0;HaplotypeScore=120.8417;InbreedingCoeff=0.3016;MQ=68.38;MQ0=8;MQRankSum=2.666;QD=12.87;ReadPosRankSum=0.713;VQSLOD=4.4263;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:26,3:27:10.26:145,0,10	1/1:3,9:12:15.05:237,15,0	0/0:24,0:12:6.02:0,6,66	./.	1/1:8,11:20:11.92:189,12,0	1/1:8,15:23:27.09:426,27,0	1/1:6,6:12:12.04:189,12,0	1/1:22,6:28:15:153,15,0	1/1:14,20:34:36.59:569,37,0	1/1:16,13:28:39.05:535,39,0	1/1:9,7:16:11.95:159,12,0	1/1:4,6:11:2.57:177,3,0	1/1:9,16:25:26.85:426,27,0	1/1:16,9:25:18.06:284,18,0	1/1:14,0:28:24.03:223,24,0	1/1:11,10:22:20.85:312,21,0	1/1:8,14:22:21.07:331,21,0	1/1:6,3:8:3.01:47,3,0	1/1:17,6:22:18.03:239,18,0	1/1:13,12:28:17.70:375,18,0	1/1:15,13:28:15.02:212,15,0	1/1:15,14:30:27.06:406,27,0	1/1:11,0:19:8.98:84,9,0	0/1:3,9:14:0.45:130,0,0	1/1:9,9:18:21.07:332,21,0	1/1:17,16:33:42.09:601,42,0	1/1:13,20:33:32.85:520,33,0	1/1:3,8:11:12.04:189,12,0
chr10	27707795	.	GT	G	20528.66	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-0.380;DP=666;FS=9.553;HRun=2;HaplotypeScore=70.2054;InbreedingCoeff=0.9983;MQ=91.45;MQ0=0;MQRankSum=-8.289;QD=35.83;ReadPosRankSum=6.629;VQSLOD=4.4560;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,15:15:45.15:584,45,0	1/1:0,12:12:33.11:429,33,0	0/0:26,0:26:78.21:0,78,1097	0/0:27,1:28:81.17:0,81,1100	1/1:0,38:38:99:1323,102,0	1/1:0,31:31:78.25:1012,78,0	1/1:0,23:23:63.20:818,63,0	1/1:1,25:26:75.22:958,75,0	1/1:0,24:24:66.21:856,66,0	1/1:1,28:29:84.23:1070,84,0	1/1:1,13:14:39.13:506,39,0	1/1:0,18:18:51.16:657,51,0	1/1:0,28:28:84.27:1090,84,0	1/1:2,19:21:57.14:721,57,0	0/0:39,0:39:99:0,114,1677	1/1:0,21:21:57.19:740,57,0	1/1:0,17:17:45.15:584,45,0	1/1:0,8:8:21.03:253,21,0	1/1:0,16:16:48.15:611,48,0	1/1:0,20:20:60.16:759,60,0	1/1:0,33:33:87.28:1129,87,0	1/1:0,28:28:84.27:1090,84,0	1/1:0,25:25:69.08:896,69,0	1/1:0,15:15:39.13:506,39,0	1/1:0,23:23:66.21:857,66,0	1/1:0,31:31:93.26:1174,93,0	1/1:0,41:41:99:1440,111,0	1/1:2,14:16:36.12:467,36,0
chr10	27708488	.	AAAC	A	15551.01	PASS	AB=0.625;AC=49;AF=0.875;AN=56;BaseQRankSum=3.497;DP=644;FS=0.000;HRun=0;HaplotypeScore=101.0535;InbreedingCoeff=0.7797;MQ=70.08;MQ0=2;MQRankSum=-1.845;QD=27.67;ReadPosRankSum=3.896;VQSLOD=5.0306;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,28:31:60.20:843,60,0	1/1:3,13:17:42.06:539,42,0	0/0:30,0:23:30.05:0,30,459	0/0:27,0:26:41.30:0,41,811	1/1:4,26:30:66.18:910,66,0	1/1:11,20:31:47.83:710,48,0	1/1:3,16:19:42.14:588,42,0	1/1:13,15:28:45.10:566,45,0	1/1:10,16:26:45.15:636,45,0	1/1:7,25:32:74.53:1000,75,0	1/1:5,20:25:54.14:740,54,0	1/1:2,14:16:5.36:514,5,0	1/1:1,21:22:53.86:762,54,0	1/1:5,18:23:42.14:593,42,0	0/0:24,1:25:11.84:0,12,976	1/1:6,12:18:30.10:423,30,0	0/1:6,9:15:19.03:351,0,19	1/1:2,6:8:9.03:127,9,0	1/1:11,10:20:36.09:453,36,0	1/1:7,21:28:60.20:847,60,0	1/1:6,15:21:33.11:466,33,0	1/1:2,11:14:24.05:317,24,0	1/1:4,16:20:41.82:593,42,0	1/1:6,14:20:39.13:551,39,0	1/1:6,19:25:57.19:805,57,0	1/1:10,21:31:63.19:871,63,0	1/1:5,23:28:63.21:891,63,0	1/1:1,12:13:33.11:456,33,0
chr10	27708814	.	TA	T	14100.52	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=0.277;DP=638;FS=16.930;HRun=9;HaplotypeScore=62.4123;InbreedingCoeff=0.9947;MQ=65.86;MQ0=0;MQRankSum=-6.394;QD=23.19;ReadPosRankSum=3.643;VQSLOD=3.9216;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,34:35:99:906,99,0	1/1:0,14:14:39.02:357,39,0	0/0:19,0:18:26.18:0,26,416	0/0:11,0:10:21.03:0,21,226	1/1:3,36:39:99:978,108,0	1/1:1,18:19:54.03:494,54,0	1/1:1,16:17:48.03:439,48,0	1/1:4,28:32:80.97:720,81,0	1/1:3,23:26:66.03:604,66,0	1/1:1,31:32:93.04:846,93,0	1/1:2,25:27:72.04:659,72,0	1/1:2,20:22:54.03:494,54,0	1/1:2,18:20:51.03:467,51,0	1/1:1,14:15:36.02:329,36,0	1/1:2,17:19:48.03:439,48,0	1/1:1,16:17:48.03:439,48,0	1/1:2,23:25:59.83:549,60,0	1/1:1,7:8:21.01:191,21,0	1/1:5,19:24:57.02:521,57,0	1/1:6,28:34:81:734,81,0	1/1:2,17:19:45.02:412,45,0	1/1:5,25:30:72.03:659,72,0	1/1:2,22:24:57.03:522,57,0	1/1:2,24:26:54.03:494,54,0	1/1:2,26:28:60.03:549,60,0	1/1:3,23:27:71.07:637,71,0	1/1:3,16:19:42.02:384,42,0	1/1:0,10:10:30.02:275,30,0
chr10	27709172	.	G	GA	14977.21	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-7.641;DP=589;FS=10.211;HRun=8;HaplotypeScore=50.5010;InbreedingCoeff=0.9848;MQ=74.77;MQ0=0;MQRankSum=-4.488;QD=27.23;ReadPosRankSum=3.315;VQSLOD=5.0103;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,29:32:87.08:976,87,0	1/1:0,13:13:36.11:413,36,0	0/0:15,0:15:33.01:0,33,299	0/0:12,0:11:20.80:0,21,192	1/1:2,15:17:42.08:470,42,0	1/1:5,16:21:48.14:554,48,0	1/1:6,17:23:54.15:615,54,0	1/1:7,31:38:87.24:992,87,0	1/1:6,18:25:45.05:502,45,0	1/1:4,26:30:78.23:900,78,0	1/1:2,22:24:54.16:623,54,0	1/1:7,18:25:45.13:519,45,0	1/1:2,21:23:60.18:692,60,0	1/1:2,16:18:45.13:519,45,0	0/0:12,0:12:33.01:0,33,302	1/1:5,21:25:60.18:692,60,0	1/1:2,20:22:57.17:658,57,0	1/1:1,5:6:12.04:138,12,0	1/1:3,13:16:22.89:420,23,0	1/1:9,22:31:63.15:712,63,0	1/1:2,16:18:34.27:506,34,0	1/1:4,20:24:51.15:589,51,0	1/1:5,27:32:78.23:900,78,0	1/1:0,13:13:36.11:415,36,0	1/1:3,20:23:57.17:658,57,0	1/1:4,15:19:45.13:519,45,0	1/1:0,24:24:66.20:762,66,0	1/1:1,6:7:21.05:232,21,0
chr10	27709758	.	ATATATACATACATATATATGTGTGTGTATGTGTGTGTG	A	600.72	PASS	AB=0.889;AC=7;AF=0.318;AN=22;BaseQRankSum=1.743;DP=59;FS=12.208;HRun=0;HaplotypeScore=45.8976;InbreedingCoeff=-0.0236;MQ=42.47;MQ0=3;MQRankSum=-1.189;QD=20.71;ReadPosRankSum=1.664;VQSLOD=0.1440;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	0/0:9,0:2:3.46:0,3,24	./.	1/1:1,1:2:3.01:181,3,0	0/0:1,0:1:0.89:0,1,2	0/1:10,0:10:75.15:75,0,121	./.	0/0:1,0:1:0:0,0,0	./.	./.	0/0:2,0:2:0.89:0,1,2	./.	./.	./.	0/1:6,6:11:15.83:281,0,16	1/1:2,0:2:3.01:63,3,0	./.	./.	./.	./.	./.	0/0:1,0:1:3.01:0,3,61	0/0:2,0:2:0:0,0,0	0/1:3,0:3:42.56:84,0,43	./.	./.
chr10	27711061	.	GA	G	12087.39	PASS	AB=0.929;AC=53;AF=0.946;AN=56;BaseQRankSum=-4.907;DP=591;FS=4.431;HRun=9;HaplotypeScore=78.8368;InbreedingCoeff=0.5952;MQ=77.04;MQ0=0;MQRankSum=-5.213;QD=21.17;ReadPosRankSum=4.841;VQSLOD=5.5072;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,17:19:45.02:412,45,0	1/1:1,4:5:12:110,12,0	0/0:19,1:18:9.73:0,10,312	0/1:12,1:13:13.41:13,0,202	1/1:4,25:29:60.36:619,60,0	1/1:2,29:31:84.04:769,84,0	1/1:3,17:20:39.02:357,39,0	1/1:6,30:36:87:786,87,0	1/1:2,13:15:33.01:302,33,0	1/1:2,21:23:56.77:505,57,0	1/1:2,24:26:54:493,54,0	1/1:2,14:16:39.02:357,39,0	1/1:3,23:26:57.03:521,57,0	1/1:1,19:20:51.03:467,51,0	1/1:4,16:20:42.02:384,42,0	1/1:0,15:15:45.02:412,45,0	1/1:3,19:22:48.02:439,48,0	1/1:2,12:14:27.01:247,27,0	1/1:4,14:18:42:377,42,0	1/1:3,27:30:59.85:528,60,0	1/1:0,16:16:48.03:439,48,0	1/1:5,20:25:60.02:548,60,0	1/1:2,26:28:65.69:603,66,0	1/1:0,16:16:36.02:329,36,0	1/1:2,20:22:54.03:494,54,0	1/1:2,28:30:84:755,84,0	1/1:2,27:29:78.04:714,78,0	1/1:0,7:7:12.01:110,12,0
chr10	27711566	.	GA	G	1328.92	PASS	AC=18;AF=1.000;AN=18;DP=45;FS=0.000;HRun=1;HaplotypeScore=75.8111;MQ=27.92;MQ0=0;QD=30.91;VQSLOD=3.1319;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	1/1:0,3:3:9.03:126,9,0	./.	./.	1/1:0,7:7:9.03:125,9,0	./.	./.	1/1:0,3:3:6.02:84,6,0	./.	1/1:0,1:1:3.01:42,3,0	1/1:0,3:3:9.03:126,9,0	./.	./.	./.	./.	./.	./.	./.	./.	1/1:0,13:13:33.11:460,33,0	./.	1/1:0,3:3:6.02:84,6,0	1/1:0,5:5:12.04:167,12,0	./.	1/1:0,5:5:15.01:187,15,0	./.	./.	./.
chr10	27712758	.	TC	T	8227.56	PASS	AB=0.985;AC=52;AF=0.929;AN=56;BaseQRankSum=-6.571;DP=611;FS=0.567;HRun=1;HaplotypeScore=302.3098;InbreedingCoeff=-0.0899;MQ=56.27;MQ0=0;MQRankSum=-1.963;QD=13.47;ReadPosRankSum=9.204;VQSLOD=3.5758;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:21:25.75:222,26,0	1/1:9,0:9:5.13:99,5,0	0/1:16,0:16:34.50:35,0,37	0/1:15,1:16:42.46:74,0,42	1/1:32,0:32:48.19:436,48,0	1/1:29,0:29:67.14:480,67,0	1/1:18,0:18:46.74:279,47,0	1/1:33,0:33:7.02:300,7,0	1/1:29,0:29:65.02:447,65,0	1/1:30,0:30:78.12:401,78,0	1/1:34,0:34:39.52:442,40,0	1/1:22,0:22:9.70:279,10,0	1/1:33,0:33:42.26:466,42,0	0/1:24,0:24:19.62:257,0,20	1/1:0,29:29:81.24:936,81,0	1/1:29,0:29:47.76:427,48,0	1/1:18,0:18:5.28:178,5,0	1/1:10,0:10:20.28:112,20,0	1/1:12,0:12:13.14:125,13,0	1/1:28,0:28:61.48:429,61,0	1/1:17,0:17:25.56:216,26,0	1/1:15,0:15:8.42:176,8,0	1/1:22,0:22:41.97:333,42,0	1/1:9,0:9:17.43:102,17,0	0/1:11,0:11:3.50:129,0,4	1/1:21,0:21:21.89:248,22,0	1/1:37,0:37:56.80:492,57,0	1/1:7,0:7:20.03:107,20,0
chr10	27714908	.	GA	G	11180.55	PASS	AB=0.957;AC=51;AF=0.911;AN=56;BaseQRankSum=-3.592;DP=610;FS=1.962;HRun=10;HaplotypeScore=105.5482;InbreedingCoeff=0.8103;MQ=75.02;MQ0=0;MQRankSum=-2.524;QD=19.79;ReadPosRankSum=2.545;VQSLOD=4.9914;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,10:11:26.99:234,27,0	1/1:1,15:16:38.98:339,39,0	0/1:21,1:19:4.48:4,0,171	0/0:17,0:16:21.84:0,22,188	1/1:3,30:33:83.47:712,83,0	1/1:4,17:21:50.98:443,51,0	1/1:2,19:21:50.99:443,51,0	1/1:5,23:28:35.77:539,36,0	1/1:3,15:18:41.99:365,42,0	1/1:4,17:21:44.96:391,45,0	1/1:6,22:28:59.96:521,60,0	1/1:4,16:20:44.97:389,45,0	1/1:2,24:26:68.96:599,69,0	1/1:2,15:17:41.99:365,42,0	0/0:6,0:28:72.38:0,72,386	1/1:3,16:19:8.81:305,9,0	1/1:0,11:11:32.99:287,33,0	1/1:4,5:9:11.97:99,12,0	1/1:3,17:20:20.83:410,21,0	1/1:6,35:41:68.76:826,69,0	1/1:0,21:21:56.99:495,57,0	1/1:0,15:15:44.99:390,45,0	1/1:3,23:26:56.98:494,57,0	1/1:3,11:14:32.99:287,33,0	1/1:2,31:34:83.02:709,83,0	1/1:3,22:25:65.98:573,66,0	1/1:4,32:36:80.97:703,81,0	1/1:1,11:12:29.99:260,30,0
chr10	27717414	.	T	TTGTG	3134.25	PASS	AB=0.929;AC=48;AF=0.923;AN=52;BaseQRankSum=-0.275;DP=638;FS=2.793;HRun=0;HaplotypeScore=148.5951;InbreedingCoeff=-0.0052;MQ=59.21;MQ0=12;MQRankSum=1.017;QD=5.16;ReadPosRankSum=-0.481;VQSLOD=2.7631;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:48,0:47:28.20:193,0,28	1/1:9,0:9:9.86:72,10,0	0/1:24,0:16:0:0,0,0	./.	1/1:19,0:19:5.98:92,6,0	1/1:26,0:26:8.47:66,8,0	1/1:22,0:22:15.14:122,15,0	1/1:21,0:20:1.27:22,1,0	1/1:24,0:25:24.55:245,25,0	1/1:15,0:15:14.83:151,15,0	1/1:14,0:14:0.21:20,0,0	1/1:14,10:27:5.84:130,6,0	1/1:27,0:27:16.38:112,16,0	1/1:25,0:25:18.66:137,19,0	1/1:22,0:22:11.69:158,12,0	1/1:21,0:21:11.38:182,11,0	1/1:27,0:28:19.99:131,20,0	0/1:6,0:10:17.89:18,0,25	1/1:25,0:25:13.63:130,14,0	1/1:18,1:23:15:216,15,0	1/1:35,0:34:22.44:234,22,0	1/1:18,0:18:12.15:112,12,0	1/1:17,0:16:12:120,12,0	1/1:32,0:32:13.19:114,13,0	0/1:33,0:33:10.44:122,0,10	1/1:20,0:20:9.64:145,10,0	1/1:11,3:17:9.50:199,10,0	./.
chr10	27718324	.	AAAAAC	A	21106.90	PASS	AB=0.778;AC=50;AF=0.893;AN=56;BaseQRankSum=-0.368;DP=514;FS=0.571;HRun=0;HaplotypeScore=135.0051;InbreedingCoeff=0.5641;MQ=63.44;MQ0=4;MQRankSum=-6.908;QD=45.69;ReadPosRankSum=3.646;VQSLOD=5.0620;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,14:15:33.11:680,33,0	1/1:0,14:14:36.12:728,36,0	0/1:34,0:18:16.37:16,0,775	0/0:37,0:21:52.23:0,52,877	1/1:1,35:36:99:1933,99,0	1/1:0,19:19:48.16:989,48,0	1/1:0,10:10:30.10:607,30,0	1/1:2,21:23:51.15:921,51,0	1/1:2,9:11:27.09:538,27,0	1/1:2,24:26:72.14:1301,72,0	1/1:1,24:25:69.15:1327,69,0	1/1:1,13:14:33.11:669,33,0	1/1:1,21:22:54.18:1113,54,0	1/1:2,9:10:24.08:484,24,0	0/0:15,0:15:42.14:0,42,1161	1/1:1,16:17:42.14:856,42,0	1/1:1,11:12:21.07:408,21,0	0/1:1,4:5:12.05:174,0,12	1/1:2,27:27:78.23:1396,78,0	1/1:2,27:29:81.23:1583,81,0	1/1:0,2:2:5.98:82,6,0	1/1:0,11:11:33.11:649,33,0	1/1:1,19:20:41.78:854,42,0	1/1:2,7:9:12.01:208,12,0	1/1:1,19:20:51.17:1029,51,0	1/1:1,18:19:54.18:1078,54,0	1/1:0,27:27:69.24:1423,69,0	1/1:0,1:1:3.01:62,3,0
chr10	27718425	.	TTATCTCAA	T	1394.79	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-2.910;DP=545;FS=2.119;HRun=0;HaplotypeScore=243.7298;InbreedingCoeff=0.9831;MQ=79.30;MQ0=0;MQRankSum=-6.549;QD=73.41;ReadPosRankSum=1.169;VQSLOD=3.8220;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:36.12:0,36,1339	0/0:10,0:10:30.10:0,30,1070	0/0:14,0:14:42.14:0,42,1537	0/0:15,0:15:35.99:0,36,1346	0/0:31,0:31:90.31:0,90,3249	0/0:20,0:20:57.20:0,57,2091	0/0:16,0:16:45.15:0,45,1642	0/0:31,0:31:84.28:0,84,2840	0/0:25,0:25:72.25:0,72,2518	0/0:25,0:25:69.21:0,69,2262	0/0:19,0:19:51.18:0,51,1710	0/0:13,0:13:39.13:0,39,1467	0/0:15,0:15:42.14:0,42,1565	0/0:23,0:23:69.24:0,69,2498	1/1:1,18:19:51.18:1490,51,0	0/0:19,0:19:57.20:0,57,2037	0/0:7,0:7:18.06:0,18,656	0/0:10,0:10:24.08:0,24,778	0/0:29,0:29:84.29:0,84,2816	0/0:32,0:32:93.32:0,93,3441	0/0:8,0:8:24.08:0,24,847	0/0:18,0:18:54.19:0,54,1929	0/0:31,0:31:84.08:0,84,3025	0/0:12,0:12:33.11:0,33,1179	0/0:29,0:29:84.29:0,84,3024	0/0:21,0:21:63.22:0,63,2250	0/0:32,0:31:93.32:0,93,3378	0/0:7,0:7:21.07:0,21,745
chr10	27719065	.	TC	T	18347.41	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=4.310;DP=618;FS=2.818;HRun=3;HaplotypeScore=61.2614;InbreedingCoeff=0.9966;MQ=91.62;MQ0=0;MQRankSum=-8.201;QD=34.04;ReadPosRankSum=4.666;VQSLOD=5.3350;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,19:20:54.17:669,54,0	1/1:0,9:9:27.08:335,27,0	0/0:21,0:21:56.92:0,57,778	0/0:28,0:28:72.21:0,72,999	1/1:0,24:24:69.22:855,69,0	1/1:1,27:28:78.24:967,78,0	1/1:0,18:18:42.13:521,42,0	1/1:0,25:25:75.21:905,75,0	1/1:0,19:19:54.17:670,54,0	1/1:0,22:22:66.19:805,66,0	1/1:1,22:23:63.20:781,63,0	1/1:0,20:20:60.19:744,60,0	1/1:0,27:27:69.22:855,69,0	1/1:1,27:28:84.26:1039,84,0	0/0:30,0:30:81.25:0,81,1145	1/1:1,20:21:51.16:632,51,0	1/1:1,29:30:90.26:1101,90,0	1/1:2,17:19:35.62:478,36,0	1/1:1,18:19:54.17:669,54,0	1/1:0,27:27:75.24:927,75,0	1/1:1,26:27:66.21:818,66,0	1/1:0,13:13:33.10:409,33,0	1/1:1,18:19:51.16:632,51,0	1/1:0,23:23:66.21:818,66,0	1/1:0,19:19:51.16:632,51,0	1/1:0,27:27:81.25:1004,81,0	1/1:0,26:26:69.22:855,69,0	1/1:0,6:6:18.06:223,18,0
chr10	27719136	.	CCCATCCAT	C	787.82	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.187;DP=592;FS=1.121;HRun=0;HaplotypeScore=185.4152;InbreedingCoeff=0.9163;MQ=73.22;MQ0=1;MQRankSum=-5.826;QD=30.30;ReadPosRankSum=1.092;VQSLOD=3.3194;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:24.08:0,24,866	0/0:6,0:6:15.04:0,15,413	0/0:26,0:17:21.04:0,21,576	0/0:29,0:23:27.09:0,27,714	0/0:22,0:22:48.13:0,48,1369	0/0:26,0:26:57.20:0,57,1987	0/0:26,0:26:48.10:0,48,1174	0/0:38,0:38:54.16:0,54,1546	0/0:20,0:20:39.13:0,39,1372	0/0:26,0:26:51.16:0,51,1644	0/0:19,0:19:39.13:0,39,1340	0/0:16,0:16:33.11:0,33,1165	0/0:24,0:24:54.19:0,54,1865	0/0:27,0:27:60.21:0,60,2054	1/1:10,16:26:36.12:883,36,0	0/0:19,0:19:39.12:0,39,1231	0/0:19,0:19:36.12:0,36,1236	0/0:14,0:13:9.03:0,9,275	0/0:13,0:13:21.06:0,21,612	0/0:23,0:23:47.53:0,48,1479	0/0:30,0:30:60.12:0,60,1740	0/0:11,0:11:21.07:0,21,653	0/0:13,0:13:33.11:0,33,1133	0/0:16,0:16:35.14:0,35,1102	0/0:29,0:29:62.24:0,62,2125	0/0:26,0:26:66.20:0,66,2064	0/0:23,0:23:57.18:0,57,1950	0/0:12,0:12:27.09:0,27,944
chr10	27720402	.	GTT	G	4625.70	PASS	AC=48;AF=0.889;AN=54;BaseQRankSum=0.626;DP=374;FS=22.321;HRun=3;HaplotypeScore=60.8647;InbreedingCoeff=0.5224;MQ=53.73;MQ0=1;MQRankSum=2.347;QD=14.02;ReadPosRankSum=2.956;VQSLOD=0.6265;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,28:34:6.02:91,6,0	1/1:0,6:6:12.04:183,12,0	0/0:13,0:6:11.67:0,12,180	0/0:11,0:5:14.99:0,15,169	1/1:0,12:12:9.03:137,9,0	1/1:1,12:13:6.01:91,6,0	1/1:0,17:16:12.04:183,12,0	1/1:0,18:18:50.74:520,51,0	1/1:1,15:16:2.52:45,3,0	1/1:7,5:12:29.98:348,30,0	1/1:0,10:10:9.03:137,9,0	1/1:2,6:8:8.98:110,9,0	1/1:2,10:11:11.13:84,11,0	1/1:1,10:11:12.04:183,12,0	./.	0/0:2,4:6:0:0,0,0	1/1:0,14:13:5.71:70,6,0	1/1:1,6:7:12.01:158,12,0	1/1:2,14:16:44.75:490,45,0	1/1:1,16:17:17.93:275,18,0	1/1:0,12:11:12.04:183,12,0	1/1:1,11:12:12.04:183,12,0	1/1:2,10:12:15:203,15,0	1/1:2,18:20:8.91:137,9,0	1/1:1,14:14:3.01:46,3,0	1/1:1,17:18:44.97:601,45,0	1/1:1,10:11:8.22:120,8,0	1/1:0,7:7:3.01:46,3,0
chr10	27720589	.	A	ACAAGGCT	39001.98	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-3.457;DP=445;FS=0.000;HRun=0;HaplotypeScore=141.9672;InbreedingCoeff=0.8787;MQ=66.28;MQ0=0;MQRankSum=-8.196;QD=93.75;ReadPosRankSum=2.804;VQSLOD=5.7570;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,12:21:42.14:1593,42,0	1/1:3,6:9:21.07:809,21,0	0/0:16,0:16:36.12:0,36,907	0/0:13,0:13:36.12:0,36,828	1/1:7,17:25:57.20:2143,57,0	1/1:5,10:16:42.14:1551,42,0	1/1:6,7:14:36.12:1323,36,0	1/1:20,10:33:81.25:2823,81,0	1/1:3,10:15:39.13:1431,39,0	1/1:8,14:22:66.23:2437,66,0	1/1:6,24:30:78.27:2970,78,0	1/1:4,8:14:30.10:1170,30,0	1/1:4,12:17:42.14:1584,42,0	1/1:3,10:14:33.11:1302,33,0	1/1:7,11:19:48.16:1833,48,0	1/1:3,16:19:57.20:2136,57,0	1/1:2,5:7:21.07:837,21,0	1/1:0,3:3:9.03:359,9,0	1/1:7,12:19:48.13:1749,48,0	1/1:6,18:24:69.24:2586,69,0	1/1:3,2:7:9.03:358,9,0	1/1:6,9:15:36.12:1293,36,0	1/1:5,4:9:27.09:981,27,0	1/1:2,6:8:12.04:464,12,0	1/1:5,17:24:60.21:2352,60,0	1/1:6,7:14:39.12:1457,39,0	1/1:4,9:15:33.11:1219,33,0	1/1:0,2:3:6.02:239,6,0
chr10	27722412	.	TTTA	T	4641.79	PASS	AB=1.000;AC=49;AF=0.875;AN=56;BaseQRankSum=0.281;DP=637;FS=5.493;HRun=0;HaplotypeScore=177.1803;InbreedingCoeff=0.8031;MQ=74.82;MQ0=0;MQRankSum=-5.096;QD=7.95;ReadPosRankSum=7.176;VQSLOD=3.0512;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:32,3:35:61.31:327,61,0	1/1:15,0:15:33.38:160,33,0	0/0:17,0:17:47.78:0,48,723	0/0:18,0:16:38.75:0,39,612	1/1:30,0:30:35.43:191,35,0	1/1:26,1:27:39.49:220,39,0	1/1:8,0:8:19.96:69,20,0	1/1:30,0:30:47.34:309,47,0	1/1:22,0:22:42.28:147,42,0	0/1:25,0:25:15.42:159,0,15	1/1:23,1:24:32.02:222,32,0	1/1:29,0:29:57.43:210,57,0	1/1:36,0:36:48.90:216,49,0	1/1:23,0:23:47.16:164,47,0	0/0:18,0:18:40.03:0,40,148	1/1:22,1:23:28.07:187,28,0	1/1:19,0:19:32.32:112,32,0	1/1:12,0:12:27.45:95,27,0	1/1:23,0:23:38.32:250,38,0	1/1:28,0:28:5.19:155,5,0	1/1:12,0:12:27.80:106,28,0	1/1:22,1:23:38.77:256,39,0	1/1:25,0:25:47.25:164,47,0	1/1:18,0:18:29.68:103,30,0	1/1:24,0:24:49.91:173,50,0	1/1:34,2:36:89.94:431,90,0	1/1:29,0:27:34.55:157,35,0	1/1:8,0:8:17.47:60,17,0
chr10	27722413	.	TTA	T	19105.57	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-5.563;DP=626;FS=11.112;HRun=0;HaplotypeScore=112.8744;InbreedingCoeff=0.9961;MQ=75.21;MQ0=0;MQRankSum=-5.850;QD=32.27;ReadPosRankSum=5.618;VQSLOD=6.7774;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,32:35:72.18:946,72,0	1/1:1,14:15:39.02:499,39,0	0/0:16,0:16:37.29:0,37,536	0/0:17,0:16:38.39:0,38,477	1/1:1,28:29:73.87:939,74,0	1/1:2,24:27:55.93:716,56,0	1/1:0,8:8:24.08:334,24,0	1/1:0,28:28:84.12:1024,84,0	1/1:0,21:21:51.17:711,51,0	1/1:1,23:24:62.22:805,62,0	1/1:2,21:23:52.60:675,53,0	1/1:1,28:29:68.89:941,69,0	1/1:0,35:35:83.82:1169,84,0	1/1:0,23:23:57.19:794,57,0	1/1:19,0:19:29.07:79,29,0	1/1:1,21:22:60.17:817,60,0	1/1:0,19:19:39.13:543,39,0	1/1:0,12:12:33.11:460,33,0	1/1:0,21:22:66.12:841,66,0	1/1:1,26:27:71.86:925,72,0	1/1:0,12:12:33.07:438,33,0	1/1:1,22:23:62.72:714,63,0	1/1:0,25:25:56.77:794,57,0	1/1:0,18:18:39.13:533,39,0	1/1:0,24:24:60.20:837,60,0	1/1:2,34:36:99:1399,108,0	1/1:1,27:28:65.03:880,65,0	1/1:0,8:8:21.07:293,21,0
chr10	27722414	.	TA	T	8969.31	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-2.366;DP=627;FS=14.197;HRun=3;HaplotypeScore=137.7768;InbreedingCoeff=0.8692;MQ=75.83;MQ0=0;MQRankSum=-6.750;QD=15.15;ReadPosRankSum=4.546;VQSLOD=3.5324;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:35,0:35:70.19:411,70,0	1/1:15,0:15:38:222,38,0	0/0:16,0:16:1.33:0,1,344	0/0:19,0:17:38.84:0,39,415	1/1:28,1:29:70.33:435,70,0	1/1:27,0:27:35.72:283,36,0	1/1:8,0:8:23.40:137,23,0	1/1:28,0:28:82.38:531,82,0	1/1:21,0:21:49.72:292,50,0	1/1:24,0:24:58.70:368,59,0	1/1:23,0:23:58.63:356,59,0	1/1:29,0:29:67.31:399,67,0	1/1:35,0:35:81.40:479,81,0	1/1:23,0:23:55.57:326,56,0	1/1:0,19:19:48.15:591,48,0	1/1:22,0:22:58.49:343,58,0	1/1:19,0:19:38.02:223,38,0	1/1:12,0:12:32.17:189,32,0	1/1:22,0:22:64.48:392,64,0	1/1:26,1:27:67.14:391,67,0	1/1:12,0:12:32.21:192,32,0	1/1:23,0:23:61.48:363,61,0	1/1:25,0:25:55.15:326,55,0	1/1:18,0:18:37.31:213,37,0	1/1:24,0:24:58.49:344,58,0	1/1:36,0:36:99:648,106,0	1/1:27,1:26:64.37:395,64,0	1/1:8,0:8:20.47:120,20,0
chr10	27723233	.	T	TGTTTGGTTTG	15449.50	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=0.435;DP=739;FS=3.580;HRun=0;HaplotypeScore=184.6097;InbreedingCoeff=0.6037;MQ=67.09;MQ0=5;MQRankSum=1.714;QD=24.06;ReadPosRankSum=1.362;VQSLOD=3.8172;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:24,16:45:14.94:311,15,0	1/1:13,0:13:18.02:311,18,0	0/0:39,0:26:0.47:0,0,1	0/0:58,0:32:2.76:0,3,19	1/1:15,7:23:14.97:383,15,0	1/1:10,12:22:15.05:714,15,0	1/1:22,0:21:26.98:479,27,0	1/1:30,0:30:12:157,12,0	1/1:9,7:18:9.03:444,9,0	1/1:14,8:23:21.05:749,21,0	1/1:15,0:15:26.84:301,27,0	1/1:15,10:25:24.08:1076,24,0	1/1:17,10:27:18.06:806,18,0	1/1:16,10:27:18.06:887,18,0	1/1:19,0:35:24:233,24,0	1/1:12,9:21:15.05:660,15,0	1/1:34,0:34:38.90:567,39,0	1/1:19,0:19:21.03:512,21,0	1/1:18,8:27:30.09:843,30,0	1/1:21,3:24:19.88:827,20,0	1/1:23,0:21:14.97:256,15,0	1/1:17,11:29:23.82:323,24,0	1/1:17,0:17:27.03:511,27,0	1/1:13,10:25:21.07:885,21,0	1/1:17,7:25:9.03:444,9,0	1/1:16,6:25:31.79:795,32,0	1/1:16,10:29:33.48:1533,33,0	1/1:15,0:14:27.03:444,27,0
chr10	27723871	.	TAA	T	7241.88	PASS	AB=0.538;AC=51;AF=0.911;AN=56;BaseQRankSum=7.425;DP=431;FS=0.000;HRun=5;HaplotypeScore=170.4189;InbreedingCoeff=0.7549;MQ=76.05;MQ0=2;MQRankSum=-7.865;QD=18.86;ReadPosRankSum=4.605;VQSLOD=1.5252;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,11:13:26.84:209,27,0	1/1:1,3:4:8.99:87,9,0	0/0:22,0:20:48.16:0,48,855	0/0:24,1:19:8.72:0,9,541	1/1:6,9:15:17.85:141,18,0	1/1:2,19:21:53.77:450,54,0	1/1:4,17:21:39.32:412,39,0	1/1:6,9:15:29.97:260,30,0	1/1:2,18:20:50.49:430,50,0	1/1:3,10:14:29.55:281,30,0	1/1:0,6:6:17.80:130,18,0	1/1:4,15:18:47.49:357,47,0	1/1:3,16:19:36.07:381,36,0	1/1:3,16:19:48.63:404,49,0	1/1:2,23:25:62.75:564,63,0	1/1:7,15:22:50.74:457,51,0	1/1:5,10:14:28.49:240,28,0	1/1:1,11:12:32.92:313,33,0	1/1:3,10:13:27.02:257,27,0	1/1:1,8:9:15.82:152,16,0	1/1:4,17:21:38.93:379,39,0	1/1:3,3:6:8.86:59,9,0	1/1:6,8:14:17.96:177,18,0	1/1:4,14:18:32.39:289,32,0	0/1:1,6:7:0.78:53,0,1	1/1:2,10:12:32.97:304,33,0	1/1:4,17:20:41.88:369,42,0	1/1:0,3:3:9:87,9,0
chr10	27723877	.	T	TC	10238.21	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=7.565;DP=412;FS=1.498;HRun=0;HaplotypeScore=180.1717;InbreedingCoeff=0.9196;MQ=74.13;MQ0=3;MQRankSum=-8.941;QD=28.52;ReadPosRankSum=2.863;VQSLOD=4.5949;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,11:14:33.06:343,33,0	1/1:0,3:3:9.02:105,9,0	0/0:22,0:18:48.09:0,48,652	0/0:30,0:21:37.96:0,38,537	1/1:2,9:11:30.05:314,30,0	1/1:1,19:20:60.11:641,60,0	1/1:4,17:21:51.05:536,51,0	1/1:2,9:11:33.08:367,33,0	1/1:2,18:20:53.99:571,54,0	1/1:5,10:15:35.84:423,36,0	1/1:2,6:8:17.99:166,18,0	1/1:2,15:17:51.01:510,51,0	1/1:2,16:18:54.06:591,54,0	1/1:3,16:19:53.10:551,53,0	1/1:1,23:24:69.12:765,69,0	1/1:1,15:16:48.05:544,48,0	1/1:4,10:13:27.06:294,27,0	1/1:0,11:11:33.09:397,33,0	1/1:3,10:13:36.10:435,36,0	1/1:1,8:9:24.03:249,24,0	1/1:2,17:19:48.11:558,48,0	1/1:0,3:3:8.98:77,9,0	1/1:2,8:10:18.04:213,18,0	1/1:5,15:20:36.04:383,36,0	1/1:2,6:8:15.80:136,16,0	1/1:1,10:11:33.08:373,33,0	1/1:0,17:17:48.10:522,48,0	1/1:4,3:7:15.04:175,15,0
chr10	27723894	.	G	GGTGTGTGT	6653.47	PASS	AB=0.763;AC=42;AF=0.875;AN=48;BaseQRankSum=-2.143;DP=621;FS=0.000;HRun=0;HaplotypeScore=269.3740;InbreedingCoeff=0.0143;MQ=52.74;MQ0=22;MQRankSum=0.747;QD=12.92;ReadPosRankSum=0.355;VQSLOD=2.8103;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:12,0:21:27.60:124,0,28	./.	./.	0/1:46,0:18:12.93:13,0,73	1/1:13,0:23:2.75:103,3,0	1/1:22,0:31:18.40:468,18,0	1/1:19,0:29:17.55:480,18,0	1/1:12,0:14:23.29:278,23,0	1/1:18,0:29:0.31:364,0,0	1/1:16,0:24:33.92:711,34,0	1/1:10,0:20:2.61:70,3,0	0/1:14,1:22:3.12:159,0,3	1/1:14,0:23:17.83:291,18,0	./.	1/1:19,0:25:14.99:473,15,0	1/1:12,0:23:9.03:314,9,0	1/1:6,0:17:1.25:3,1,0	1/1:6,0:10:15:344,15,0	1/1:11,0:17:21.95:553,22,0	0/1:8,0:20:0.22:100,0,0	1/1:20,0:21:2.99:24,3,0	0/0:5,0:10:0.47:0,0,1	1/1:12,0:19:2.88:69,3,0	./.	1/1:5,0:20:3.01:104,3,0	1/1:13,0:21:31.43:661,31,0	1/1:12,0:25:30.94:714,31,0	1/1:2,0:10:9.02:234,9,0
chr10	27724494	.	C	CCCTTTAAGCCTTTGCATTTATTGTAA	59680.20	PASS	AB=0.909;AC=54;AF=0.964;AN=56;BaseQRankSum=-6.129;DP=382;FS=6.573;HRun=0;HaplotypeScore=477.6096;InbreedingCoeff=-0.0374;MQ=65.81;MQ0=0;MQRankSum=-0.215;QD=156.23;ReadPosRankSum=3.688;VQSLOD=3.8358;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:16:29.59:1939,30,0	1/1:8,0:8:10.97:1228,11,0	1/1:7,2:11:24.07:1500,24,0	0/1:7,0:9:9.39:1186,0,9	1/1:22,0:22:25.74:2718,26,0	1/1:16,0:16:35.75:2814,36,0	1/1:8,0:8:21.07:1030,21,0	1/1:7,0:7:15.05:1171,15,0	0/1:6,0:6:3.60:219,0,4	1/1:22,0:22:34.34:3295,34,0	1/1:23,0:23:52.31:3370,52,0	1/1:8,0:8:15.81:841,16,0	1/1:15,0:15:38.89:2822,39,0	1/1:22,0:22:59.37:3459,59,0	1/1:14,0:14:42.09:3025,42,0	1/1:21,0:21:42.30:3738,42,0	1/1:7,0:7:15.05:712,15,0	1/1:3,0:3:9.03:745,9,0	1/1:9,0:9:27.09:1199,27,0	1/1:14,0:14:12.84:1503,13,0	1/1:6,0:6:18.06:979,18,0	1/1:22,0:22:50.37:3917,50,0	1/1:16,0:16:37.51:2443,38,0	1/1:7,0:7:12.04:728,12,0	1/1:22,0:22:43.86:3959,44,0	1/1:28,0:28:54.60:5301,55,0	1/1:13,0:13:39.09:3095,39,0	1/1:7,0:7:20.05:746,20,0
chr10	27724495	.	C	CCTTTAAGCCTTTGCATTTATTGTAA	4658.96	PASS	AB=0.778;AC=35;AF=0.972;AN=36;BaseQRankSum=-1.655;DP=54;FS=0.000;HRun=0;HaplotypeScore=42.9753;InbreedingCoeff=-0.1437;MQ=130.35;MQ0=0;MQRankSum=-0.962;QD=91.35;ReadPosRankSum=-0.423;VQSLOD=3.8263;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	./.	1/1:4,0:6:15.03:653,15,0	0/1:5,1:7:9.39:1192,0,9	1/1:3,0:3:3.01:127,3,0	1/1:5,0:5:12.04:253,12,0	1/1:2,0:2:6.02:149,6,0	./.	1/1:2,0:2:6.02:182,6,0	1/1:4,0:4:12.04:497,12,0	1/1:3,0:3:6.02:117,6,0	./.	1/1:2,0:2:2.97:20,3,0	1/1:1,0:1:3.01:77,3,0	./.	1/1:1,0:1:3.01:50,3,0	./.	1/1:1,0:1:3.01:75,3,0	1/1:4,0:4:12.04:440,12,0	./.	1/1:1,0:1:3.01:135,3,0	./.	1/1:1,0:1:3.01:88,3,0	1/1:1,0:1:3.01:72,3,0	./.	1/1:5,0:5:15.05:452,15,0	1/1:2,0:2:5.98:79,6,0	./.
chr10	27725258	.	A	AG	20792.45	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=5.498;DP=599;FS=4.368;HRun=1;HaplotypeScore=100.1424;InbreedingCoeff=0.9663;MQ=85.65;MQ0=0;MQRankSum=-11.113;QD=37.94;ReadPosRankSum=5.747;VQSLOD=4.8550;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,16:16:42.14:583,42,0	1/1:1,9:10:27.09:371,27,0	0/0:23,0:23:62:0,62,759	0/0:28,0:28:84.26:0,84,1061	1/1:0,26:26:75.25:1018,75,0	1/1:1,22:23:66.22:913,66,0	1/1:0,16:16:45.15:625,45,0	1/1:2,28:30:79.10:1026,79,0	1/1:1,20:21:57.19:794,57,0	1/1:0,23:23:66.18:903,66,0	1/1:0,29:29:81.27:1127,81,0	1/1:1,24:25:72.24:996,72,0	1/1:4,23:27:66.12:917,66,0	1/1:0,21:21:63.21:878,63,0	1/1:1,25:26:72.24:989,72,0	1/1:0,20:20:51.17:716,51,0	1/1:0,14:14:36.12:494,36,0	1/1:0,3:3:9.03:127,9,0	1/1:1,18:19:54.16:738,54,0	1/1:0,31:31:90.25:1223,90,0	1/1:1,27:28:78.26:1090,78,0	1/1:0,15:15:39.13:546,39,0	1/1:2,18:20:51.17:719,51,0	1/1:0,19:19:51.17:713,51,0	1/1:0,15:15:42.14:583,42,0	1/1:0,25:25:75.25:1041,75,0	1/1:0,39:39:99:1415,102,0	1/1:0,7:7:18.06:248,18,0
chr10	27726958	.	G	GT	12366.48	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-6.405;DP=418;FS=0.000;HRun=7;HaplotypeScore=33.7782;InbreedingCoeff=0.9094;MQ=80.86;MQ0=0;MQRankSum=-6.963;QD=31.07;ReadPosRankSum=3.369;VQSLOD=4.2376;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,9:11:24.07:290,24,0	1/1:1,7:8:18.06:217,18,0	0/0:15,0:15:39.05:0,39,375	0/0:5,0:5:11.85:0,12,97	1/1:1,26:27:78.20:924,78,0	1/1:3,19:22:54.17:652,54,0	1/1:2,6:8:18.06:217,18,0	1/1:2,26:28:78.19:896,78,0	1/1:1,13:14:36.11:429,36,0	1/1:2,13:15:39.11:461,39,0	1/1:0,28:28:84.22:998,84,0	1/1:2,7:9:21.06:254,21,0	1/1:2,17:19:51.16:616,51,0	1/1:0,11:11:30.09:362,30,0	1/1:2,19:21:51.16:616,51,0	1/1:2,9:11:24.07:290,24,0	1/1:3,20:23:51.16:616,51,0	1/1:0,9:9:27.08:326,27,0	1/1:4,7:11:24.07:290,24,0	1/1:1,27:28:75.13:872,75,0	1/1:0,6:6:18.06:217,18,0	1/1:1,8:9:21.06:254,21,0	1/1:1,14:16:42.13:503,42,0	1/1:1,7:8:18.06:217,18,0	1/1:1,12:13:33.10:399,33,0	1/1:0,18:18:54.17:652,54,0	1/1:3,20:23:60.18:725,60,0	1/1:0,2:2:6.02:72,6,0
chr10	27729542	.	GA	G	16497.31	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-0.805;DP=598;FS=24.237;HRun=5;HaplotypeScore=61.4736;InbreedingCoeff=0.9798;MQ=89.04;MQ0=0;MQRankSum=-9.705;QD=29.78;ReadPosRankSum=5.260;VQSLOD=2.9798;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,20:24:54.15:613,54,0	1/1:0,13:13:39.09:431,39,0	0/0:21,0:22:32.75:0,33,697	0/0:22,0:22:39.74:0,40,640	1/1:3,20:23:57.16:644,57,0	1/1:1,23:24:63.18:715,63,0	1/1:1,18:19:45.13:511,45,0	1/1:2,26:28:78.21:875,78,0	1/1:0,22:22:60.17:681,60,0	1/1:3,27:31:84.24:951,84,0	1/1:0,27:27:78.22:882,78,0	1/1:2,19:21:48.14:544,48,0	1/1:0,23:23:66.19:749,66,0	1/1:1,20:21:51.14:579,51,0	1/1:3,18:21:54.15:613,54,0	1/1:0,14:14:39.11:442,39,0	1/1:2,22:24:63.18:715,63,0	1/1:2,6:8:12.03:136,12,0	1/1:4,25:29:75.18:830,75,0	1/1:1,30:31:81.23:917,81,0	1/1:2,25:27:69.20:783,69,0	1/1:1,11:12:33.09:374,33,0	1/1:0,18:18:51.15:578,51,0	1/1:2,10:12:33.05:360,33,0	1/1:0,22:22:66.19:749,66,0	1/1:1,21:22:63.16:704,63,0	1/1:0,32:32:81.23:918,81,0	1/1:0,6:6:18.05:204,18,0
chr10	27729922	.	A	ATTAGTAAGAGC	77259.46	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-7.228;DP=604;FS=10.928;HRun=0;HaplotypeScore=160.8657;InbreedingCoeff=0.9379;MQ=70.14;MQ0=0;MQRankSum=-11.095;QD=139.71;ReadPosRankSum=6.901;VQSLOD=4.9792;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,21:35:78.27:4106,78,0	1/1:2,6:9:24.08:1416,24,0	0/0:22,0:22:47.37:0,47,1661	0/0:29,0:29:76.32:0,76,2431	1/1:7,21:31:84.29:4159,84,0	1/1:7,13:21:60.21:3304,60,0	1/1:5,11:19:48.16:2781,48,0	1/1:10,12:27:78.27:3785,78,0	1/1:7,16:27:66.23:3536,66,0	1/1:9,19:32:88.16:4556,88,0	1/1:2,11:15:42.10:2181,42,0	1/1:5,22:31:84.29:4758,84,0	1/1:4,15:21:57.20:3267,57,0	1/1:5,16:22:63.22:3657,63,0	1/1:7,14:26:66.23:3629,66,0	1/1:6,15:24:63.22:3478,63,0	1/1:3,6:11:24.08:1274,24,0	1/1:1,1:2:6:200,6,0	1/1:5,6:13:33.11:1751,33,0	1/1:5,20:29:75.22:4221,75,0	1/1:4,2:7:15.05:884,15,0	1/1:4,15:22:60.20:3107,60,0	1/1:5,14:21:48.16:2442,48,0	1/1:0,13:14:36.04:1763,36,0	1/1:3,16:23:57.20:3109,57,0	1/1:8,19:31:90.29:4669,90,0	1/1:10,16:32:66.70:3804,67,0	1/1:0,8:8:24.08:1418,24,0
chr10	27730134	.	G	GA	546.48	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-1.381;DP=680;FS=0.000;HRun=6;HaplotypeScore=66.2006;InbreedingCoeff=0.9942;MQ=80.54;MQ0=0;MQRankSum=-0.988;QD=21.86;ReadPosRankSum=0.884;VQSLOD=2.7838;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,105,1061	0/0:12,0:12:33.07:0,33,336	0/0:18,0:18:29.77:0,30,395	0/0:27,0:27:67.83:0,68,686	0/0:35,0:35:78.15:0,78,785	0/0:23,0:23:57.12:0,57,578	0/0:22,0:22:63.07:0,63,619	0/0:33,0:33:90.19:0,90,914	0/0:24,0:24:63.14:0,63,642	0/0:27,0:27:75.12:0,75,749	0/0:18,0:18:36.08:0,36,367	0/0:28,0:28:72.16:0,72,734	0/0:19,0:19:45.10:0,45,458	0/0:30,0:30:84.19:0,84,856	1/1:2,23:25:51.16:641,51,0	0/0:21,0:21:54.10:0,54,544	0/0:12,0:12:21.04:0,21,214	0/0:12,0:12:30.03:0,30,295	0/0:16,0:16:45.09:0,45,452	0/0:41,0:41:99:0,99,1003	0/0:23,0:23:60.13:0,60,612	0/0:28,0:28:72.16:0,72,732	0/0:26,0:26:60.05:0,60,589	0/0:16,0:16:42.05:0,42,417	0/0:39,0:39:99:0,111,1132	0/0:29,0:29:81.17:0,81,821	0/0:30,0:30:72.15:0,72,728	0/0:11,0:11:33.01:0,33,322
chr10	27730425	.	GCAGCCTTATTTATAATAGC	G	719.57	PASS	AC=2;AF=0.037;AN=54;BaseQRankSum=3.772;DP=716;FS=1.800;HRun=0;HaplotypeScore=233.7073;InbreedingCoeff=0.8283;MQ=43.29;MQ0=29;MQRankSum=-2.792;QD=26.65;ReadPosRankSum=0.731;VQSLOD=2.2593;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:38:54.17:0,54,3793	0/0:16,0:16:45.03:0,45,3656	0/0:12,0:2:5.69:0,6,98	./.	0/0:28,0:27:42.14:0,42,3198	0/0:24,0:24:30.09:0,30,1932	0/0:23,0:14:27.09:0,27,2256	0/0:31,0:10:21.07:0,21,1357	0/0:27,0:27:33.11:0,33,2003	0/0:28,0:27:78.27:0,78,5897	0/0:31,0:30:44.84:0,45,2879	0/0:18,0:18:27.09:0,27,2338	0/0:25,0:25:30.10:0,30,2194	0/0:20,0:19:23.82:0,24,1572	1/1:3,24:17:15.05:808,15,0	0/0:28,0:25:36.12:0,36,2460	0/0:42,0:38:48.16:0,48,3509	0/0:24,0:20:33.11:0,33,2740	0/0:18,0:16:48.16:0,48,3560	0/0:41,0:40:84.76:0,85,6260	0/0:42,0:39:72:0,72,4502	0/0:25,0:24:59.89:0,60,4618	0/0:26,0:25:36.02:0,36,2109	0/0:20,0:18:12.04:0,12,722	0/0:21,0:21:46.39:0,46,3473	0/0:30,0:28:72.25:0,72,5662	0/0:24,0:24:30.09:0,30,1848	0/0:5,0:5:12.01:0,12,1022
chr10	27731233	.	TG	T	10180.08	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-6.270;DP=530;FS=21.988;HRun=8;HaplotypeScore=68.7756;InbreedingCoeff=0.9710;MQ=65.78;MQ0=0;MQRankSum=-2.312;QD=21.03;ReadPosRankSum=3.473;VQSLOD=3.5040;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,23:29:61.62:656,62,0	1/1:1,7:8:21.03:203,21,0	0/0:18,0:14:42.12:0,42,488	0/0:14,0:9:18.05:0,18,206	1/1:1,12:13:35.36:316,35,0	1/1:3,16:19:44.99:422,45,0	1/1:0,16:16:36.06:348,36,0	1/1:2,11:13:30.04:290,30,0	1/1:5,14:19:42.06:405,42,0	1/1:7,15:22:45.06:434,45,0	1/1:3,9:12:21.03:203,21,0	1/1:4,20:24:54.08:521,54,0	1/1:3,15:18:42.06:405,42,0	1/1:0,10:10:24.04:232,24,0	0/0:2,0:14:34.47:0,34,175	1/1:1,10:11:21.03:203,21,0	1/1:4,37:41:90.14:869,90,0	1/1:4,12:16:33.05:318,33,0	1/1:1,15:16:42.06:405,42,0	1/1:3,22:25:53.95:499,54,0	1/1:8,36:44:93.14:898,93,0	1/1:6,18:24:51.03:482,51,0	1/1:2,16:18:39.06:376,39,0	1/1:7,24:31:60.09:580,60,0	1/1:6,12:18:33.04:319,33,0	1/1:4,13:17:35.94:334,36,0	1/1:0,15:15:38.98:376,39,0	1/1:1,4:5:9.01:87,9,0
chr10	27731343	.	A	AAGAG	4061.17	PASS	AB=0.908;AC=45;AF=0.833;AN=54;BaseQRankSum=-4.077;DP=470;FS=5.885;HRun=0;HaplotypeScore=103.1379;InbreedingCoeff=0.2258;MQ=55.29;MQ0=14;MQRankSum=3.050;QD=9.91;ReadPosRankSum=0.198;VQSLOD=2.1197;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:14,2:19:11.77:178,12,0	1/1:11,0:11:21.07:320,21,0	1/1:38,0:20:0.47:1,0,0	./.	1/1:18,0:16:9.01:152,9,0	1/1:15,0:15:21.06:300,21,0	0/0:6,2:8:3.01:0,3,46	1/1:22,0:22:4.26:70,4,0	1/1:11,2:12:12.04:268,12,0	1/1:24,0:23:21.07:392,21,0	1/1:15,2:17:9.03:180,9,0	0/1:10,0:15:54:54,0,95	1/1:16,0:16:3.01:67,3,0	0/1:11,2:13:0:0,0,0	1/1:10,0:10:3.01:42,3,0	1/1:7,4:11:8.78:201,9,0	1/1:11,3:17:17.79:318,18,0	1/1:11,1:10:10.09:158,10,0	1/1:11,0:11:12.04:249,12,0	0/0:9,0:15:19.58:0,20,171	1/1:6,4:12:9.03:203,9,0	1/1:15,0:15:9.01:131,9,0	1/1:12,1:13:12.04:195,12,0	1/1:14,5:20:9.03:209,9,0	0/1:21,0:21:77.36:93,0,77	1/1:6,0:13:11.49:89,11,0	0/1:12,0:19:65.02:92,0,65	0/1:12,0:10:37.18:99,0,37
chr10	27731561	.	T	TCC	305.37	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.631;DP=534;FS=0.000;HRun=0;HaplotypeScore=67.9868;InbreedingCoeff=0.9948;MQ=92.34;MQ0=0;MQRankSum=-5.015;QD=27.76;ReadPosRankSum=0.466;VQSLOD=4.6561;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:48.16:0,48,777	0/0:14,0:14:42.12:0,42,656	0/0:27,0:27:81.25:0,81,1240	0/0:19,0:19:51.61:0,52,750	0/0:22,0:22:66.20:0,66,1025	0/0:18,0:18:51.17:0,51,829	0/0:11,0:11:33.10:0,33,514	0/0:40,0:40:99:0,117,1887	0/0:17,0:17:51.17:0,51,829	0/0:18,0:17:51.17:0,51,810	0/0:19,0:18:48.16:0,48,778	0/0:17,0:17:48.15:0,48,759	0/0:22,0:22:57.13:0,57,863	0/0:21,0:21:63.21:0,63,1011	1/1:1,10:11:33.10:400,33,0	0/0:16,0:16:45.15:0,45,732	0/0:8,0:8:21.07:0,21,343	0/0:17,0:17:51.15:0,51,797	0/0:20,0:20:60.20:0,60,955	0/0:26,0:26:69.22:0,69,1096	0/0:17,0:17:51.17:0,51,825	0/0:26,0:26:72.25:0,72,1170	0/0:23,0:23:69.24:0,69,1126	0/0:15,0:15:45.15:0,45,730	0/0:15,0:14:42.14:0,42,685	0/0:19,0:19:57.19:0,57,927	0/0:30,0:30:90.31:0,90,1461	0/0:10,0:10:30.10:0,30,489
chr10	27731562	.	A	ATT	264.37	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.630;DP=537;FS=0.000;HRun=1;HaplotypeScore=69.3085;InbreedingCoeff=0.9946;MQ=91.60;MQ0=0;MQRankSum=-4.961;QD=22.03;ReadPosRankSum=0.056;VQSLOD=1.3762;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:48.14:0,48,756	0/0:13,0:13:39.13:0,39,633	0/0:26,0:26:74.92:0,75,1144	0/0:19,0:19:48.62:0,49,722	0/0:23,0:23:66.20:0,66,1025	0/0:18,0:18:51.17:0,51,829	0/0:10,0:10:30.10:0,30,489	0/0:39,0:39:99:0,117,1866	0/0:17,0:17:51.17:0,51,829	0/0:18,0:17:48.16:0,48,783	0/0:19,0:18:48.13:0,48,734	0/0:17,0:17:45.15:0,45,734	0/0:23,0:23:60.16:0,60,897	0/0:21,0:21:63.22:0,63,1026	1/1:2,10:12:33.08:359,33,0	0/0:16,0:16:48.12:0,48,751	0/0:8,0:8:21.07:0,21,343	0/0:17,0:17:51.15:0,51,799	0/0:21,0:21:60.19:0,60,934	0/0:26,0:26:66.21:0,66,1052	0/0:18,0:18:51.17:0,51,825	0/0:26,0:26:72.23:0,72,1148	0/0:23,0:23:69.24:0,69,1125	0/0:15,0:15:45.14:0,45,709	0/0:17,0:16:42.14:0,42,685	0/0:19,0:19:57.18:0,57,905	0/0:30,0:30:90.31:0,90,1462	0/0:10,0:10:30.10:0,30,489
chr10	27731565	.	G	GTC	444.45	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.852;DP=524;FS=0.000;HRun=0;HaplotypeScore=67.0591;InbreedingCoeff=0.9946;MQ=91.03;MQ0=0;MQRankSum=-4.482;QD=37.04;ReadPosRankSum=-0.942;VQSLOD=5.2651;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:45.15:0,45,734	0/0:12,0:12:36.12:0,36,587	0/0:24,0:24:72.23:0,72,1109	0/0:19,0:19:51.59:0,52,776	0/0:23,0:23:69.22:0,69,1098	0/0:18,0:18:51.16:0,51,808	0/0:10,0:10:30.10:0,30,489	0/0:40,0:40:99:0,120,1912	0/0:16,0:16:48.16:0,48,783	0/0:17,0:16:45.15:0,45,734	0/0:16,0:15:42.13:0,42,661	0/0:17,0:17:48.16:0,48,780	0/0:20,0:20:57.19:0,57,907	0/0:21,0:21:63.20:0,63,1003	1/1:2,10:12:36.10:539,36,0	0/0:18,0:18:54.16:0,54,814	0/0:8,0:8:21.07:0,21,342	0/0:17,0:17:51.11:0,51,800	0/0:20,0:20:60.20:0,60,967	0/0:24,0:24:63.22:0,63,1027	0/0:17,0:17:51.16:0,51,804	0/0:24,0:24:69.24:0,69,1123	0/0:23,0:23:69.24:0,69,1125	0/0:14,0:14:42.14:0,42,685	0/0:19,0:18:51.17:0,51,825	0/0:20,0:20:57.19:0,57,928	0/0:30,0:30:90.31:0,90,1462	0/0:10,0:10:30.10:0,30,489
chr10	27732170	.	T	TC	960.05	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.242;DP=570;FS=2.764;HRun=0;HaplotypeScore=64.4239;InbreedingCoeff=0.9834;MQ=72.11;MQ0=0;MQRankSum=0.548;QD=41.74;ReadPosRankSum=1.122;VQSLOD=4.3611;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:26:69.23:0,69,961	0/0:5,0:5:15.05:0,15,210	0/0:28,0:24:55.20:0,55,660	0/0:26,0:24:33.94:0,34,499	0/0:31,0:31:93.31:0,93,1301	0/0:28,0:28:84.28:0,84,1175	0/0:17,0:17:48.15:0,48,654	0/0:26,0:26:75.25:0,75,1049	0/0:18,0:18:54.17:0,54,739	0/0:20,0:20:60.20:0,60,840	0/0:23,0:23:63.21:0,63,881	0/0:14,0:14:42.13:0,42,570	0/0:18,0:18:51.17:0,51,711	0/0:21,0:21:63.20:0,63,862	1/1:0,23:23:66.23:1055,66,0	0/0:11,0:11:33.11:0,33,462	0/0:20,0:20:51.14:0,51,686	0/0:15,0:15:45.15:0,45,629	0/0:10,0:10:30.07:0,30,386	0/0:28,0:28:81.26:0,81,1116	0/0:16,0:16:48.16:0,48,669	0/0:28,0:28:84.28:0,84,1174	0/0:24,0:24:72.24:0,72,1007	0/0:18,0:18:51.15:0,51,695	0/0:15,0:15:45.15:0,45,630	0/0:23,0:23:69.22:0,69,949	0/0:25,0:25:72.23:0,72,987	0/0:13,0:13:39.13:0,39,546
chr10	27732329	.	G	GTCA	37360.98	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-9.130;DP=620;FS=2.128;HRun=0;HaplotypeScore=68.8533;InbreedingCoeff=0.9869;MQ=81.79;MQ0=0;MQRankSum=-9.880;QD=64.42;ReadPosRankSum=6.292;VQSLOD=6.6920;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:0,31:32:81.28:1994,81,0	1/1:0,7:8:18.06:436,18,0	0/0:24,0:24:68.60:0,69,1197	0/0:16,0:15:45.15:0,45,791	1/1:0,36:36:96.33:2355,96,0	1/1:0,29:30:69.24:1698,69,0	1/1:0,12:13:33.11:813,33,0	1/1:0,21:21:63.21:1480,63,0	1/1:1,18:19:51.17:1248,51,0	1/1:0,24:25:72.24:1696,72,0	1/1:0,21:22:57.20:1404,57,0	1/1:0,27:28:69.24:1696,69,0	1/1:0,18:19:44.88:1106,45,0	1/1:0,16:16:48.16:1174,48,0	1/1:0,30:31:81.28:1995,81,0	1/1:0,19:20:51.04:1255,51,0	1/1:0,28:33:78.27:1920,78,0	1/1:0,9:9:27.09:664,27,0	1/1:0,15:15:45.15:1085,45,0	1/1:0,37:40:99:2448,102,0	1/1:1,13:14:33.11:813,33,0	1/1:0,18:18:54.19:1329,54,0	1/1:1,15:18:48.16:1176,48,0	1/1:0,13:13:33.11:812,33,0	1/1:0,23:24:63.22:1551,63,0	1/1:2,28:34:99:2259,99,0	1/1:0,36:36:99:2584,105,0	1/1:0,5:5:15.05:369,15,0
chr10	27733654	.	AAT	A	110.61	PASS	AB=1.000;AC=3;AF=0.058;AN=52;BaseQRankSum=3.629;DP=209;FS=0.000;HRun=0;HaplotypeScore=29.3981;InbreedingCoeff=0.3419;MQ=95.44;MQ0=1;MQRankSum=-0.092;QD=7.90;ReadPosRankSum=-0.042;VQSLOD=2.1964;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:1,0:1:2.99:0,3,23	./.	0/1:7,0:6:8.19:8,0,31	0/0:24,0:15:14.32:0,14,139	0/0:6,0:6:18.03:0,18,253	0/0:10,0:10:27.09:0,27,460	0/0:2,0:2:3.01:0,3,51	0/0:33,0:33:78.22:0,78,1204	0/0:6,0:6:18.03:0,18,255	0/0:6,0:6:18.05:0,18,283	0/0:8,0:8:21.07:0,21,356	0/0:3,0:3:9.02:0,9,127	0/0:9,0:9:21.06:0,21,332	0/0:5,0:5:12.04:0,12,204	1/1:1,6:7:15.05:197,15,0	0/0:2,0:2:6.02:0,6,102	0/0:9,0:9:26.98:0,27,425	0/0:10,0:10:30.09:0,30,467	0/0:16,0:16:33.10:0,33,524	0/0:5,0:5:12.04:0,12,187	0/0:4,0:4:12.04:0,12,205	0/0:1,0:1:3.01:0,3,51	0/0:3,0:3:3.01:0,3,49	./.	0/0:7,0:7:18.06:0,18,304	0/0:7,0:7:15.05:0,15,255	0/0:6,0:6:18.06:0,18,283	0/0:11,0:11:30.09:0,30,469
chr10	27734246	.	G	GA	220.01	PASS	AB=0.958;AC=5;AF=0.093;AN=54;BaseQRankSum=-2.580;DP=352;FS=4.817;HRun=10;HaplotypeScore=36.5547;InbreedingCoeff=0.2812;MQ=69.22;MQ0=1;MQRankSum=0.773;QD=4.31;ReadPosRankSum=-0.434;VQSLOD=-0.3297;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:13:35:0,35,277	0/0:7,0:7:20.98:0,21,172	0/1:12,1:6:24.11:26,0,24	0/1:10,0:7:16.13:16,0,51	0/1:16,1:17:7.94:8,0,274	0/0:15,0:15:41.95:0,42,345	0/0:11,0:11:17.94:0,18,148	0/0:23,0:23:56.88:0,57,462	1/1:1,10:11:27.07:288,27,0	0/0:22,0:22:56.88:0,57,467	0/0:17,0:17:41.94:0,42,344	0/0:12,0:12:13.29:0,13,205	0/0:10,0:10:26.95:0,27,222	0/0:5,0:5:14.98:0,15,123	0/0:17,1:18:6:0,6,245	0/0:10,0:10:23.96:0,24,197	0/0:11,0:11:29.96:0,30,246	./.	0/0:20,0:20:19.13:0,19,357	0/0:19,0:19:53.92:0,54,440	0/0:5,0:5:14.98:0,15,123	0/0:9,0:9:20.97:0,21,172	0/0:16,1:17:6.93:0,7,263	0/0:6,0:6:11.97:0,12,99	0/0:11,0:11:29.96:0,30,246	0/0:15,0:15:41.95:0,42,345	0/0:22,0:21:53.92:0,54,443	0/0:3,0:3:5.98:0,6,49
chr10	27735401	.	AT	A	7905.40	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-4.543;DP=388;FS=9.741;HRun=9;HaplotypeScore=47.3765;InbreedingCoeff=0.8464;MQ=78.34;MQ0=2;MQRankSum=-5.642;QD=22.39;ReadPosRankSum=5.400;VQSLOD=4.7947;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,6:7:18.01:165,18,0	1/1:0,6:6:18.01:165,18,0	0/0:16,0:9:2.15:0,2,98	0/0:18,0:15:15.02:0,15,185	1/1:1,15:16:42.02:384,42,0	1/1:2,15:17:42.02:384,42,0	1/1:3,11:14:33.01:302,33,0	1/1:7,14:21:24.10:387,24,0	1/1:0,16:16:48.03:439,48,0	1/1:1,13:14:36.01:329,36,0	1/1:0,10:10:30.02:275,30,0	1/1:0,9:9:21.01:192,21,0	1/1:0,11:11:30.02:275,30,0	1/1:0,11:11:33.02:302,33,0	1/1:1,0:16:26.48:78,26,0	1/1:1,15:16:42.02:384,42,0	1/1:1,18:19:51.03:467,51,0	1/1:2,12:14:36.02:329,36,0	1/1:1,11:12:33.02:302,33,0	1/1:1,8:9:17.99:165,18,0	1/1:1,8:9:18:165,18,0	1/1:1,7:8:21.01:192,21,0	1/1:3,5:8:15:137,15,0	1/1:1,8:9:24.01:220,24,0	1/1:2,20:22:54.03:494,54,0	1/1:1,18:19:54.03:494,54,0	1/1:6,21:27:63.03:577,63,0	1/1:0,13:13:33.02:302,33,0
chr10	27735735	.	AT	A	453.63	PASS	AB=1.000;AC=3;AF=0.056;AN=54;BaseQRankSum=5.140;DP=341;FS=2.629;HRun=1;HaplotypeScore=43.6918;InbreedingCoeff=0.5898;MQ=76.48;MQ0=0;MQRankSum=1.929;QD=15.64;ReadPosRankSum=-0.812;VQSLOD=3.1821;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:54.18:0,54,862	0/0:9,0:9:27.09:0,27,432	0/0:10,0:7:11.32:0,11,158	0/1:15,0:14:9.80:10,0,120	0/0:14,0:14:42.14:0,42,671	0/0:16,0:16:42.14:0,42,671	0/0:5,0:5:15.05:0,15,239	0/0:37,0:37:99:0,111,1750	0/0:10,0:10:24.08:0,24,383	0/0:18,0:18:54.18:0,54,854	0/0:13,0:13:39.13:0,39,624	0/0:7,0:7:21.07:0,21,336	0/0:16,0:16:48.16:0,48,767	0/0:8,0:8:21.07:0,21,335	1/1:0,14:14:39.13:546,39,0	0/0:12,0:12:36.12:0,36,575	0/0:19,0:19:48.14:0,48,720	0/0:14,0:13:39.13:0,39,607	0/0:13,0:13:39.12:0,39,592	0/0:9,0:9:27.06:0,27,386	0/0:6,0:6:18.03:0,18,261	./.	0/0:7,0:7:21.07:0,21,331	0/0:3,0:3:6.02:0,6,96	0/0:12,0:12:36.12:0,36,575	0/0:11,0:11:33.10:0,33,507	0/0:13,0:13:39.13:0,39,623	0/0:9,0:9:27.09:0,27,432
chr10	27736985	.	A	AT	11240.19	PASS	AB=1.000;AC=51;AF=0.911;AN=56;BaseQRankSum=-8.813;DP=491;FS=7.609;HRun=9;HaplotypeScore=45.8635;InbreedingCoeff=0.6703;MQ=79.08;MQ0=0;MQRankSum=-2.905;QD=24.87;ReadPosRankSum=2.009;VQSLOD=5.4570;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,15:18:19.02:416,19,0	1/1:1,3:4:9.02:100,9,0	0/0:14,0:14:8.15:0,8,96	0/1:13,0:13:9.79:10,0,125	1/1:6,25:31:78.17:846,78,0	1/1:3,23:26:43.67:658,44,0	1/1:4,9:13:24.06:265,24,0	1/1:2,23:25:67.01:703,67,0	1/1:1,13:14:36.10:398,36,0	1/1:1,10:11:30.06:322,30,0	1/1:1,10:11:27.07:299,27,0	1/1:2,12:14:27.07:299,27,0	1/1:1,14:15:39.11:431,39,0	1/1:2,12:14:36.03:383,36,0	0/0:3,0:25:40.74:0,41,120	1/1:3,14:17:23.52:383,24,0	1/1:3,18:21:39.61:607,40,0	1/1:4,6:10:26.86:252,27,0	1/1:3,23:26:66.12:696,66,0	1/1:3,9:12:1.03:239,1,0	1/1:3,16:19:15.32:492,15,0	1/1:3,7:10:21.05:228,21,0	1/1:0,15:15:36.10:398,36,0	1/1:2,14:16:33.09:365,33,0	1/1:1,13:14:36.10:398,36,0	1/1:1,24:25:72.16:777,72,0	1/1:13,19:32:31.05:553,31,0	1/1:5,21:26:66.16:720,66,0
chr10	27740837	.	C	CAT	720.53	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-1.182;DP=691;FS=23.097;HRun=0;HaplotypeScore=198.9666;InbreedingCoeff=0.8388;MQ=74.35;MQ0=0;MQRankSum=-0.630;QD=42.38;ReadPosRankSum=-2.805;VQSLOD=1.0252;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:51.15:0,51,663	0/0:11,0:11:24.08:0,24,320	0/0:22,0:20:9.42:0,9,296	0/0:25,0:23:4.68:0,5,363	0/0:30,0:30:69.23:0,69,919	0/0:25,0:25:57.19:0,57,759	0/0:17,0:17:39.13:0,39,519	0/0:44,0:44:99:0,114,1437	0/0:20,0:20:54.14:0,54,674	0/0:35,0:35:93.30:0,93,1226	0/0:21,0:21:45.15:0,45,599	0/0:24,0:24:57.19:0,57,759	0/0:22,0:22:51.17:0,51,677	0/0:27,0:27:51.17:0,51,677	1/1:0,17:17:51.17:815,51,0	0/0:21,0:21:54.18:0,54,719	0/0:24,0:24:63.08:0,63,775	0/0:13,0:13:24.08:0,24,319	0/0:16,0:16:39.13:0,39,515	0/0:34,0:34:81.27:0,81,1077	0/0:14,0:14:33.11:0,33,439	0/0:33,0:33:66.22:0,66,874	0/0:32,0:32:72.24:0,72,958	0/0:12,0:12:36.12:0,36,479	0/0:22,0:22:51.15:0,51,656	0/0:36,0:36:93.31:0,93,1238	0/0:46,0:46:99:0,111,1478	0/0:22,0:22:45.15:0,45,599
chr10	27741302	.	C	CATCT	4448.67	PASS	AB=0.742;AC=22;AF=0.440;AN=50;BaseQRankSum=-9.465;DP=675;FS=1.260;HRun=0;HaplotypeScore=136.2388;InbreedingCoeff=0.3781;MQ=58.85;MQ0=4;MQRankSum=0.643;QD=11.99;ReadPosRankSum=-1.919;VQSLOD=3.9970;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:2.04:0,2,7	0/0:3,0:7:6.01:0,6,56	./.	./.	1/1:16,17:34:42.14:929,42,0	0/0:24,0:24:27.08:0,27,388	0/0:15,0:15:9.92:0,10,135	./.	1/1:15,7:22:9.03:208,9,0	1/1:17,4:21:9.03:208,9,0	0/1:20,11:31:8.83:329,0,9	1/1:11,7:18:3.01:69,3,0	0/0:12,0:22:16.83:0,17,145	0/0:19,0:19:27.07:0,27,387	1/1:33,0:33:0.56:6,1,0	0/1:13,10:23:27.35:329,0,27	0/1:12,6:19:66.92:293,0,67	0/1:6,11:17:39.41:63,0,39	1/1:9,5:14:15.05:342,15,0	1/1:26,16:42:36.12:786,36,0	0/1:18,15:34:99:589,0,100	0/0:25,0:25:27.06:0,27,383	0/0:7,0:17:15.01:0,15,138	0/0:9,0:21:18.02:0,18,168	1/1:11,9:21:12.04:278,12,0	0/1:23,0:42:16.26:16,0,353	0/0:20,0:34:25.79:0,26,277	0/0:19,0:28:18.02:0,18,168
chr10	27741543	.	AT	A	448.27	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.655;DP=497;FS=1.017;HRun=1;HaplotypeScore=87.2314;InbreedingCoeff=0.8874;MQ=67.31;MQ0=0;MQRankSum=-0.253;QD=32.02;ReadPosRankSum=0.655;VQSLOD=3.3700;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:54.18:0,54,756	0/0:4,0:4:12.04:0,12,172	0/0:3,0:4:7.76:0,8,133	0/0:11,0:11:15.81:0,16,281	0/0:31,0:31:93.28:0,93,1288	0/0:20,0:20:60.20:0,60,863	0/0:14,0:14:42.13:0,42,575	0/0:45,0:45:99:0,132,1818	0/0:16,0:16:48.15:0,48,670	0/0:17,0:17:51.15:0,51,704	0/0:20,0:20:60.17:0,60,825	0/0:11,0:11:33.11:0,33,466	0/0:15,0:15:42.14:0,42,582	0/0:18,0:18:51.17:0,51,721	1/1:0,14:14:39.13:543,39,0	0/0:12,0:12:36.09:0,36,478	0/0:9,0:9:27.07:0,27,369	0/0:10,0:10:27.53:0,28,351	0/0:17,0:17:51.13:0,51,678	0/0:33,0:33:99:0,99,1405	0/0:18,0:18:54.10:0,54,708	0/0:18,0:18:54.13:0,54,718	0/0:23,0:23:69.21:0,69,955	0/0:7,0:7:21.07:0,21,302	0/0:18,0:18:54.14:0,54,733	0/0:29,0:29:87.24:0,87,1211	0/0:35,0:35:99:0,102,1430	0/0:9,0:9:27.07:0,27,370
chr10	27741668	.	A	AT	13416.77	PASS	AB=0.553;AC=49;AF=0.875;AN=56;BaseQRankSum=-1.922;DP=486;FS=35.759;HRun=7;HaplotypeScore=82.4397;InbreedingCoeff=0.8210;MQ=82.80;MQ0=0;MQRankSum=-3.411;QD=30.70;ReadPosRankSum=1.354;VQSLOD=2.6869;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:4,17:21:0.78:559,0,1	1/1:0,2:2:6.02:72,6,0	0/0:11,0:11:7.46:0,7,229	0/0:21,0:21:36.01:0,36,371	1/1:1,32:33:93.29:1123,93,0	1/1:3,16:19:48.15:580,48,0	1/1:1,12:13:36.07:419,36,0	1/1:3,40:43:99:1437,120,0	1/1:1,10:11:24.07:289,24,0	1/1:3,18:21:54.15:639,54,0	1/1:3,19:22:53.90:629,54,0	1/1:3,10:13:30.09:361,30,0	1/1:0,9:9:24.07:290,24,0	1/1:2,16:18:51.11:600,51,0	0/0:17,0:17:48.08:0,48,463	1/1:0,6:6:18.06:217,18,0	1/1:2,7:9:21.06:254,21,0	1/1:0,7:7:18.06:217,18,0	1/1:2,18:20:54.17:652,54,0	1/1:3,28:31:55.28:949,55,0	1/1:2,17:19:39.12:471,39,0	1/1:1,19:20:54.17:652,54,0	1/1:1,16:17:45.14:544,45,0	1/1:1,3:4:9.03:109,9,0	1/1:1,13:14:36.11:435,36,0	1/1:1,20:21:57.17:688,57,0	1/1:2,32:34:80.91:978,81,0	1/1:0,10:10:21.06:254,21,0
chr10	27741729	.	T	TTC	1209.35	PASS	AB=0.980;AC=40;AF=0.741;AN=54;BaseQRankSum=1.401;DP=529;FS=34.465;HRun=0;HaplotypeScore=150.9505;InbreedingCoeff=0.0101;MQ=65.90;MQ0=12;MQRankSum=0.408;QD=2.71;ReadPosRankSum=-3.013;VQSLOD=0.6852;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:18,0:19:5.31:5,0,21	1/1:6,0:6:3:25,3,0	./.	0/1:34,0:18:0:0,0,0	1/1:31,0:31:8.94:65,9,0	1/1:19,0:20:2.99:24,3,0	1/1:9,0:9:3.01:31,3,0	1/1:42,0:42:8.48:63,8,0	0/1:13,1:14:23.65:38,0,24	0/1:14,0:14:13.50:48,0,13	1/1:15,0:15:4.56:47,5,0	0/1:11,0:11:23.50:36,0,23	1/1:8,0:9:6:51,6,0	1/1:23,0:23:5.66:40,6,0	0/0:11,0:11:13.95:0,14,65	0/1:10,0:8:29.51:30,0,40	1/1:10,0:10:3.46:24,3,0	0/1:8,0:8:10.45:43,0,10	0/1:26,0:26:35.75:36,0,51	1/1:25,0:23:2.53:39,3,0	1/1:19,0:19:2.74:12,3,0	0/0:21,0:20:0.86:0,1,1	1/1:28,1:29:13.81:116,14,0	1/1:5,0:5:2.74:12,3,0	0/0:21,0:19:0.47:0,0,1	1/1:23,0:22:24.33:170,24,0	1/1:25,3:28:30.79:284,31,0	1/1:15,1:16:9.36:105,9,0
chr10	27741757	.	CTCTCTCTCTCTCTCTCTT	C	591.61	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=1.347;DP=536;FS=7.526;HRun=0;HaplotypeScore=232.9974;InbreedingCoeff=0.8513;MQ=46.94;MQ0=15;MQRankSum=-2.881;QD=21.91;ReadPosRankSum=-3.758;VQSLOD=0.7981;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:21:38.27:0,38,792	0/0:8,0:8:20.70:0,21,500	1/1:19,0:5:2.03:6,2,0	0/0:34,0:11:13.94:0,14,244	0/0:38,0:37:71.98:0,72,1830	0/0:18,0:18:30.15:0,30,890	0/0:11,0:11:27.07:0,27,991	0/0:40,0:40:99:0,99,4342	0/0:20,0:20:50.99:0,51,1788	0/0:15,0:15:37.90:0,38,1626	0/0:23,0:23:42.56:0,43,992	0/0:12,0:12:21.95:0,22,1042	0/0:14,0:14:28.23:0,28,1394	0/0:21,0:21:41.81:0,42,1321	1/1:4,4:8:21.03:683,21,0	0/0:11,0:9:20.78:0,21,553	0/0:9,0:9:21.20:0,21,909	0/0:7,0:7:19.82:0,20,817	0/0:27,0:27:74.44:0,74,2744	0/0:18,0:16:17.10:0,17,698	0/0:14,0:13:26.73:0,27,884	0/0:20,0:19:20.77:0,21,515	0/0:31,0:31:52.59:0,53,2032	0/0:7,0:7:14.94:0,15,210	0/0:25,0:22:40.97:0,41,1092	0/0:25,0:24:66.18:0,66,3183	0/0:28,0:28:60.02:0,60,3288	0/0:11,0:10:21.07:0,21,1056
chr10	27741852	.	ATAAGCAAGAGGGTTAAGGTAGAGGAATTT	A	1069.70	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.837;DP=536;FS=0.000;HRun=0;HaplotypeScore=369.1328;InbreedingCoeff=0.9569;MQ=100.10;MQ0=0;MQRankSum=-3.651;QD=133.71;ReadPosRankSum=1.564;VQSLOD=2.5131;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:27.09:0,27,3117	0/0:5,0:5:15.05:0,15,1715	0/0:38,0:38:99:0,109,6646	0/0:23,0:23:66.20:0,66,4443	0/0:35,0:35:96.33:0,96,10755	0/0:32,0:32:90.31:0,90,10395	0/0:8,0:8:24.08:0,24,2253	0/0:26,0:26:75.26:0,75,5622	0/0:16,0:16:48.16:0,48,4949	0/0:26,0:26:78.27:0,78,9587	0/0:16,0:16:42.14:0,42,5383	0/0:19,0:19:54.19:0,54,6153	0/0:21,0:21:63.20:0,63,7292	0/0:18,0:18:54.19:0,54,6428	1/1:0,8:8:15.05:1158,15,0	0/0:23,0:22:63.22:0,63,7271	0/0:11,0:11:33.11:0,33,3236	0/0:11,0:11:33.11:0,33,3734	0/0:22,0:22:66.23:0,66,4121	0/0:27,0:27:78.27:0,78,9552	0/0:10,0:10:30.10:0,30,4058	0/0:17,0:17:51.16:0,51,5241	0/0:24,0:24:72.08:0,72,8466	0/0:13,0:13:36.12:0,36,4077	0/0:23,0:23:69.24:0,69,8347	0/0:22,0:22:60.21:0,60,7443	0/0:24,0:24:72.25:0,72,8402	0/0:6,0:6:18.06:0,18,2431
chr10	27741940	.	AAC	A	662.70	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=8.464;DP=578;FS=6.552;HRun=0;HaplotypeScore=76.0312;InbreedingCoeff=0.9951;MQ=91.12;MQ0=0;MQRankSum=-6.448;QD=22.09;ReadPosRankSum=0.750;VQSLOD=3.4108;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:39.13:0,39,729	0/0:8,0:8:24.08:0,24,464	0/0:24,0:24:72.22:0,72,1297	0/0:24,0:24:64.73:0,65,1097	0/0:28,0:28:84.29:0,84,1562	0/0:17,0:17:51.17:0,51,985	0/0:11,0:11:33.09:0,33,565	0/0:35,0:35:99:0,102,1913	0/0:20,0:20:60.18:0,60,1103	0/0:24,0:24:69.24:0,69,1313	0/0:20,0:20:60.21:0,60,1159	0/0:17,0:17:51.17:0,51,972	0/0:20,0:20:60.21:0,60,1139	0/0:20,0:20:60.21:0,60,1154	1/1:5,25:30:78.07:758,78,0	0/0:25,0:24:72.25:0,72,1379	0/0:9,0:8:27.09:0,27,520	0/0:10,0:10:30.10:0,30,579	0/0:28,0:28:78.27:0,78,1453	0/0:27,0:27:81.28:0,81,1564	0/0:25,0:25:72.23:0,72,1355	0/0:26,0:26:78.27:0,78,1500	0/0:29,0:29:87.30:0,87,1622	0/0:11,0:11:33.11:0,33,636	0/0:11,0:11:33.11:0,33,638	0/0:31,0:31:93.31:0,93,1763	0/0:25,0:25:75.24:0,75,1408	0/0:10,0:10:30.10:0,30,560
chr10	27741944	.	TTG	T	777.65	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=8.604;DP=571;FS=5.008;HRun=0;HaplotypeScore=71.3168;InbreedingCoeff=0.9947;MQ=92.42;MQ0=0;MQRankSum=-6.879;QD=28.80;ReadPosRankSum=0.156;VQSLOD=4.6506;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:39.13:0,39,792	0/0:8,0:8:24.08:0,24,488	0/0:27,0:27:81.23:0,81,1586	0/0:22,0:22:66.23:0,66,1245	0/0:29,0:29:87.30:0,87,1741	0/0:19,0:19:57.18:0,57,1104	0/0:10,0:10:30.10:0,30,610	0/0:31,0:31:93.31:0,93,1857	0/0:19,0:19:57.20:0,57,1155	0/0:23,0:23:69.23:0,69,1368	0/0:21,0:21:63.22:0,63,1263	0/0:18,0:18:54.19:0,54,1097	0/0:20,0:20:60.21:0,60,1197	0/0:20,0:20:57.14:0,57,1083	1/1:2,25:27:81.20:873,81,0	0/0:27,0:26:78.27:0,78,1550	0/0:9,0:8:27.09:0,27,549	0/0:10,0:10:30.10:0,30,609	0/0:26,0:26:75.20:0,75,1430	0/0:30,0:30:87.30:0,87,1750	0/0:22,0:22:66.23:0,66,1341	0/0:26,0:26:78.27:0,78,1579	0/0:29,0:29:84.29:0,84,1707	0/0:10,0:10:30.09:0,30,571	0/0:11,0:11:33.11:0,33,671	0/0:30,0:30:87.30:0,87,1768	0/0:24,0:24:69.23:0,69,1367	0/0:10,0:10:30.10:0,30,610
chr10	27742471	.	A	AT	7847.95	PASS	AC=50;AF=0.926;AN=54;BaseQRankSum=-4.014;DP=315;FS=19.582;HRun=8;HaplotypeScore=27.3440;InbreedingCoeff=0.7361;MQ=66.02;MQ0=12;MQRankSum=-2.383;QD=26.51;ReadPosRankSum=3.093;VQSLOD=3.0926;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,16:19:20.76:492,21,0	1/1:2,5:6:15.04:173,15,0	0/0:4,0:4:3:0,3,27	0/0:6,0:5:11.88:0,12,90	1/1:1,9:10:24.07:277,24,0	1/1:4,12:16:39.07:435,39,0	1/1:0,11:11:30.09:346,30,0	1/1:6,11:17:36.07:401,36,0	1/1:1,8:8:21.06:242,21,0	1/1:1,13:14:39.10:441,39,0	1/1:1,7:8:15.04:173,15,0	1/1:4,6:10:12.04:139,12,0	1/1:2,9:11:27.04:297,27,0	1/1:1,16:17:48.14:554,48,0	./.	1/1:0,8:8:21.06:242,21,0	1/1:1,9:10:30.05:331,30,0	1/1:5,6:9:18.05:208,18,0	1/1:4,12:15:14.65:409,15,0	1/1:4,11:15:33.09:374,33,0	1/1:3,2:4:6.02:69,6,0	1/1:3,4:5:15:157,15,0	1/1:1,9:9:27.08:311,27,0	1/1:0,9:9:27.08:312,27,0	1/1:3,9:12:29.92:326,30,0	1/1:2,15:17:48.14:552,48,0	1/1:6,17:23:45.13:518,45,0	1/1:1,2:2:6.02:69,6,0
chr10	27744170	.	G	GA	15187.89	PASS	AB=0.561;AC=50;AF=0.893;AN=56;BaseQRankSum=-8.025;DP=649;FS=0.657;HRun=9;HaplotypeScore=66.2155;InbreedingCoeff=0.6716;MQ=73.25;MQ0=0;MQRankSum=-5.163;QD=24.58;ReadPosRankSum=2.842;VQSLOD=5.6400;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,23:26:66.18:728,66,0	0/1:2,7:9:5:175,0,5	0/0:21,0:21:44.46:0,44,360	0/0:10,0:10:17.98:0,18,155	1/1:6,27:35:83.85:872,84,0	1/1:1,28:29:75.20:830,75,0	1/1:2,11:13:30.08:332,30,0	1/1:8,25:34:48.93:724,49,0	1/1:4,15:19:16.06:405,16,0	1/1:5,13:18:42:439,42,0	1/1:3,14:18:41.95:446,42,0	1/1:2,23:25:57.15:628,57,0	1/1:3,18:21:25.08:505,25,0	1/1:3,15:19:47.96:512,48,0	1/1:7,18:25:66.18:730,66,0	1/1:5,29:34:72.19:797,72,0	0/1:4,15:19:3.98:416,0,4	1/1:4,15:19:39.58:432,40,0	1/1:6,21:27:40.26:670,40,0	1/1:6,19:25:54.07:571,54,0	1/1:4,14:20:41.78:427,42,0	1/1:3,24:27:66.18:730,66,0	1/1:3,15:18:45.12:498,45,0	1/1:2,12:14:35.45:398,35,0	1/1:3,26:29:20.10:678,20,0	1/1:6,24:30:52.15:796,52,0	1/1:5,31:36:61.19:903,61,0	1/1:2,27:29:8.05:545,8,0
chr10	27744215	.	C	CAAAGA	1434.13	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-2.148;DP=634;FS=0.906;HRun=0;HaplotypeScore=141.0871;InbreedingCoeff=0.9966;MQ=92.87;MQ0=0;MQRankSum=-2.479;QD=71.71;ReadPosRankSum=0.368;VQSLOD=5.0478;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:81.23:0,81,1682	0/0:9,0:9:27.09:0,27,602	0/0:39,0:39:99:0,104,2120	0/0:16,0:16:48.08:0,48,881	0/0:28,0:28:78.25:0,78,1693	0/0:32,0:32:87.23:0,87,1883	0/0:11,0:11:27.08:0,27,560	0/0:32,0:32:90.28:0,90,1883	0/0:22,0:22:63.18:0,63,1317	0/0:25,0:25:72.20:0,72,1507	0/0:12,0:12:30.10:0,30,667	0/0:27,0:27:72.18:0,72,1474	0/0:18,0:18:48.16:0,48,1069	0/0:15,0:15:45.14:0,45,961	1/1:3,16:20:50.78:1529,51,0	0/0:30,0:30:68.57:0,69,1411	0/0:13,0:13:39.13:0,39,868	0/0:15,0:15:45.11:0,45,911	0/0:28,0:28:84.17:0,84,1652	0/0:23,0:23:69.17:0,69,1470	0/0:25,0:25:72.16:0,72,1511	0/0:16,0:16:48.16:0,48,1051	0/0:12,0:12:33.10:0,33,670	0/0:11,0:11:30.08:0,30,584	0/0:27,0:27:75.18:0,75,1580	0/0:39,0:38:99:0,114,2339	0/0:25,0:25:66.21:0,66,1402	0/0:36,0:36:90.20:0,90,1758
chr10	27744568	.	TGC	T	80.47	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=4.320;DP=588;FS=5.183;HRun=0;HaplotypeScore=153.5351;InbreedingCoeff=0.3038;MQ=55.83;MQ0=14;MQRankSum=-2.794;QD=0.83;ReadPosRankSum=-1.687;VQSLOD=1.6604;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:41.47:0,41,1055	0/0:10,0:10:24.07:0,24,428	0/1:33,0:15:11.49:11,0,389	0/1:26,0:15:6.34:6,0,227	0/0:17,0:16:45.15:0,45,851	0/0:20,0:20:26.34:0,26,633	0/0:17,0:15:26.66:0,27,343	0/0:25,0:24:34.30:0,34,792	0/0:13,0:13:6.52:0,7,476	0/0:18,0:18:30.53:0,31,763	0/0:8,0:8:11.31:0,11,350	0/0:26,0:26:60.15:0,60,1034	0/0:12,0:12:33.09:0,33,539	0/0:27,0:27:65.98:0,66,1158	1/1:15,9:24:11.35:130,11,0	0/0:10,0:10:20.98:0,21,404	0/0:36,0:36:83.96:0,84,1547	0/0:19,0:19:35.37:0,35,790	0/0:22,0:21:59.67:0,60,840	0/0:17,0:17:51.17:0,51,967	0/0:45,0:43:74.98:0,75,1408	0/0:4,0:4:9.03:0,9,171	0/0:14,0:14:30.08:0,30,543	0/0:31,0:28:17.13:0,17,691	0/0:25,0:25:53.40:0,53,1029	0/0:24,0:24:50.82:0,51,819	0/1:14,0:14:44.81:45,0,417	0/0:13,0:13:33.08:0,33,536
chr10	27744592	.	CAT	C	4655.37	PASS	AB=0.928;AC=43;AF=0.796;AN=54;BaseQRankSum=-10.077;DP=493;FS=0.000;HRun=0;HaplotypeScore=168.0568;InbreedingCoeff=-0.1107;MQ=44.33;MQ0=15;MQRankSum=3.925;QD=9.84;ReadPosRankSum=-4.859;VQSLOD=3.4860;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:39,4:45:39.06:390,39,0	0/1:6,0:6:3.85:77,0,4	./.	0/0:10,0:2:2.79:0,3,29	1/1:10,1:10:23.68:221,24,0	1/1:16,2:18:8.66:140,9,0	0/1:17,2:17:40.70:41,0,46	1/1:14,3:15:14.80:196,15,0	1/1:10,0:10:10.74:99,11,0	0/1:19,3:21:93.54:214,0,94	1/1:7,0:7:7.21:48,7,0	1/1:17,1:18:20.79:244,21,0	0/1:11,0:11:0.91:81,0,1	0/1:24,3:27:8.05:230,0,8	1/1:20,0:20:2.35:12,2,0	1/1:11,0:11:17.77:199,18,0	1/1:29,4:33:5.19:351,5,0	1/1:17,0:17:5:193,5,0	0/1:21,0:16:13.53:168,0,14	1/1:13,0:13:29.82:249,30,0	1/1:36,0:33:33.58:287,34,0	1/1:5,2:7:2.93:20,3,0	1/1:13,0:13:11.16:136,11,0	1/1:24,3:26:25.71:290,26,0	1/1:16,0:18:11.76:232,12,0	0/1:14,2:16:13.46:261,0,13	0/1:15,0:15:60.31:94,0,60	0/1:10,3:14:7.59:181,0,8
chr10	27745116	.	GA	G	14159.30	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=1.007;DP=576;FS=2.052;HRun=7;HaplotypeScore=59.9096;InbreedingCoeff=0.9934;MQ=84.13;MQ0=0;MQRankSum=-7.625;QD=27.02;ReadPosRankSum=5.244;VQSLOD=5.2791;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,15:18:51.11:520,51,0	1/1:1,16:17:45.10:459,45,0	0/0:20,0:20:42.59:0,43,508	0/0:12,0:13:32.64:0,33,354	1/1:2,30:32:87.19:887,87,0	1/1:0,23:23:66.15:673,66,0	1/1:1,15:16:42.09:428,42,0	1/1:0,32:32:96.17:957,96,0	1/1:2,15:17:42.10:428,42,0	1/1:1,23:24:69.13:695,69,0	1/1:1,19:20:57.13:582,57,0	1/1:1,22:23:60.13:612,60,0	1/1:1,24:25:63.14:642,63,0	1/1:5,20:25:54.12:551,54,0	0/0:19,0:19:45.13:0,45,553	1/1:1,17:18:51.12:520,51,0	1/1:2,23:25:66.15:673,66,0	1/1:0,10:10:27.06:275,27,0	1/1:1,11:12:33.05:328,33,0	1/1:1,25:26:75.17:765,75,0	1/1:1,9:10:27.06:275,27,0	1/1:0,23:23:66.15:673,66,0	1/1:3,24:27:63.14:643,63,0	1/1:2,7:9:15.03:153,15,0	1/1:2,23:25:60.14:612,60,0	1/1:1,18:19:54.12:551,54,0	1/1:5,28:32:84.19:857,84,0	1/1:2,13:15:39.09:398,39,0
chr10	27745951	.	T	TA	14153.95	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=4.998;DP=500;FS=8.793;HRun=2;HaplotypeScore=167.7758;InbreedingCoeff=0.9748;MQ=63.21;MQ0=0;MQRankSum=-4.248;QD=31.18;ReadPosRankSum=1.596;VQSLOD=3.3779;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,15:17:45.10:570,45,0	1/1:1,7:8:24.06:297,24,0	0/0:20,0:18:35.40:0,35,379	0/0:12,0:11:14.01:0,14,183	1/1:0,24:24:51:633,51,0	1/1:2,22:24:60.19:779,60,0	1/1:0,14:14:27:339,27,0	1/1:6,28:34:93.09:1094,93,0	1/1:0,16:16:42.10:533,42,0	1/1:2,29:31:80.53:1005,81,0	1/1:1,19:20:51.04:636,51,0	1/1:1,17:18:42.13:546,42,0	1/1:2,15:17:33.11:434,33,0	1/1:2,23:25:60.67:796,61,0	0/0:0,0:14:26.94:0,27,88	1/1:1,10:11:21.07:279,21,0	1/1:3,17:20:39.04:489,39,0	1/1:0,13:13:33.11:439,33,0	1/1:1,28:29:84.14:1042,84,0	1/1:4,16:20:48.07:598,48,0	1/1:1,7:8:23.99:299,24,0	1/1:0,13:13:39.09:507,39,0	1/1:0,17:17:42.09:534,42,0	1/1:0,6:6:12.04:152,12,0	1/1:1,11:12:18.06:242,18,0	1/1:2,22:24:66.11:817,66,0	1/1:5,17:22:60.08:734,60,0	1/1:0,11:11:27.09:357,27,0
chr10	27746172	.	ATGTG	A	388.08	PASS	AB=0.887;AC=22;AF=0.647;AN=34;BaseQRankSum=1.194;DP=522;FS=9.556;HRun=0;HaplotypeScore=158.7904;InbreedingCoeff=0.0692;MQ=70.96;MQ0=12;MQRankSum=-0.853;QD=1.60;ReadPosRankSum=0.785;VQSLOD=2.2650;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:30:3:25,3,0	./.	./.	./.	1/1:13,0:12:3:26,3,0	./.	1/1:20,0:20:3:28,3,0	./.	0/1:13,1:15:4.26:40,0,4	1/1:21,0:20:3:28,3,0	./.	./.	1/1:16,1:15:3.01:46,3,0	0/1:18,2:21:0.02:0,0,0	0/0:13,0:13:5.99:0,6,49	1/1:7,0:9:3:28,3,0	0/1:27,2:29:13.33:82,0,13	0/0:17,0:17:0.47:0,0,1	./.	1/1:17,0:17:3:28,3,0	0/0:38,0:38:0:0,0,1	./.	./.	1/1:28,1:32:5.88:87,6,0	1/1:8,0:8:3:28,3,0	0/0:12,0:12:0.47:0,0,1	./.	0/1:5,1:6:27.20:40,0,27
chr10	27748276	.	CTGTA	C	17242.73	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=2.308;DP=447;FS=16.087;HRun=0;HaplotypeScore=84.9656;InbreedingCoeff=0.9635;MQ=73.82;MQ0=1;MQRankSum=-6.467;QD=43.76;ReadPosRankSum=5.032;VQSLOD=4.2780;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,26:28:63.22:1115,63,0	1/1:1,4:5:12.04:215,12,0	0/0:22,0:20:51.17:0,51,1266	0/0:19,0:16:22.86:0,23,749	1/1:1,23:24:54.18:935,54,0	1/1:3,12:15:33.11:575,33,0	1/1:0,9:9:27.09:485,27,0	1/1:6,20:26:60.19:1024,60,0	1/1:0,16:16:45.15:808,45,0	1/1:0,17:17:51.17:916,51,0	1/1:3,14:17:42.14:754,42,0	1/1:0,11:11:30.10:539,30,0	1/1:0,12:12:27.09:485,27,0	1/1:0,12:12:30.10:524,30,0	0/0:12,0:12:36.12:0,36,935	1/1:1,13:14:36.12:631,36,0	1/1:2,32:34:81.28:1435,81,0	1/1:1,20:21:51.17:916,51,0	1/1:2,17:19:51.13:797,51,0	1/1:2,19:21:54.18:891,54,0	1/1:0,10:10:24.01:378,24,0	1/1:0,12:12:36.12:629,36,0	1/1:0,4:4:12.04:198,12,0	1/1:0,7:7:21.07:377,21,0	1/1:0,12:12:36.12:646,36,0	1/1:1,21:22:63.18:1055,63,0	1/1:1,20:21:39.13:698,39,0	1/1:0,4:4:12.04:215,12,0
chr10	27749161	.	CA	C	1551.84	PASS	AB=0.950;AC=53;AF=0.946;AN=56;BaseQRankSum=2.472;DP=636;FS=8.290;HRun=16;HaplotypeScore=155.4481;InbreedingCoeff=0.5825;MQ=65.20;MQ0=2;MQRankSum=-2.436;QD=2.58;ReadPosRankSum=3.708;VQSLOD=-0.5063;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:37,0:37:28.04:79,28,0	1/1:5,0:5:3.56:9,4,0	0/0:35,0:21:11.73:0,12,75	0/1:18,1:15:1.55:2,0,61	1/1:28,0:28:16.73:65,17,0	1/1:30,0:30:29.97:84,30,0	1/1:23,0:23:26.90:78,27,0	1/1:34,0:34:35.10:102,35,0	1/1:19,0:19:15.54:45,16,0	1/1:32,0:32:23.03:93,23,0	1/1:32,0:32:25.43:72,25,0	1/1:22,0:22:14.27:46,14,0	1/1:20,0:20:28.22:79,28,0	1/1:20,0:20:12.18:36,12,0	1/1:6,6:14:24.43:135,24,0	1/1:22,0:22:27.69:79,28,0	1/1:28,0:27:17.47:76,17,0	1/1:20,0:20:26.36:75,26,0	1/1:16,0:16:6.84:26,7,0	1/1:35,0:35:31.61:90,32,0	1/1:13,0:13:8.93:25,9,0	1/1:25,0:25:20.85:60,21,0	1/1:11,0:11:9.27:27,9,0	1/1:27,0:27:32.32:91,32,0	1/1:13,0:13:21.91:62,22,0	1/1:20,0:20:15.12:43,15,0	1/1:31,0:30:25.48:73,25,0	1/1:5,0:5:3.83:11,4,0
chr10	27749174	.	AAAAC	A	6288.10	PASS	AB=0.948;AC=41;AF=0.732;AN=56;BaseQRankSum=6.494;DP=642;FS=1.910;HRun=0;HaplotypeScore=166.8020;InbreedingCoeff=0.1827;MQ=62.54;MQ0=3;MQRankSum=-1.225;QD=10.92;ReadPosRankSum=7.518;VQSLOD=3.8726;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:33,3:36:15.76:303,16,0	1/1:3,0:3:2.06:64,2,0	0/0:32,0:16:35.98:0,36,450	0/0:19,0:13:35.94:0,36,462	0/1:32,1:33:17.41:353,0,17	1/1:23,1:24:7.91:229,8,0	1/1:19,1:20:38.59:276,39,0	1/1:37,1:38:46.88:561,47,0	1/1:17,2:19:20.90:189,21,0	1/1:28,3:31:47.78:533,48,0	0/1:27,0:27:23.42:164,0,23	1/1:20,2:22:1.22:144,1,0	0/1:23,1:24:2.77:253,0,3	0/1:18,0:18:1.94:85,0,2	0/0:15,0:15:45.04:0,45,576	1/1:23,2:25:27.01:288,27,0	0/1:30,3:32:16.54:428,0,17	1/1:24,0:24:6.18:279,6,0	0/1:10,3:13:8.93:209,0,9	0/1:34,1:35:8.96:308,0,9	0/1:16,2:18:2.78:141,0,3	1/1:19,1:20:31.56:263,32,0	1/1:13,0:13:6.57:117,7,0	1/1:24,2:26:46.28:314,46,0	1/1:16,0:16:31.79:169,32,0	1/1:21,0:21:35.18:363,35,0	1/1:29,2:30:35.47:224,35,0	0/1:6,0:6:12.57:29,0,13
chr10	27749175	.	AAAC	A	14176.54	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=0.976;DP=612;FS=0.619;HRun=0;HaplotypeScore=125.4861;InbreedingCoeff=0.9565;MQ=62.36;MQ0=3;MQRankSum=-1.576;QD=25.87;ReadPosRankSum=4.382;VQSLOD=5.1007;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,29:34:51.41:637,51,0	1/1:2,1:3:8.96:72,9,0	0/0:31,0:16:35.97:0,36,390	0/0:18,0:13:36.29:0,36,384	1/1:16,14:31:53.74:766,54,0	1/1:4,20:24:48.01:670,48,0	1/1:4,16:20:50.27:612,50,0	1/1:18,17:35:98.61:1103,99,0	1/1:3,15:18:26.67:329,27,0	1/1:14,15:30:80.89:957,81,0	1/1:7,18:25:55.78:666,56,0	1/1:7,14:21:30.94:324,31,0	1/1:12,11:23:53.63:678,54,0	1/1:5,13:18:35.44:406,35,0	0/0:15,0:15:37.76:0,38,375	1/1:4,19:23:45.06:604,45,0	1/1:18,14:32:82.20:895,82,0	1/1:11,13:24:58.10:702,58,0	1/1:8,3:11:32.99:339,33,0	1/1:3,28:31:55.07:792,55,0	1/1:3,14:17:19.65:216,20,0	1/1:8,12:20:56.54:629,57,0	1/1:8,5:13:35.93:355,36,0	1/1:2,22:24:48.15:663,48,0	1/1:0,16:16:33.11:476,33,0	1/1:1,20:21:59.82:604,60,0	1/1:2,26:28:41.78:559,42,0	1/1:1,5:6:8.96:123,9,0
chr10	27749176	.	AAC	A	9733.28	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=2.088;DP=593;FS=2.350;HRun=0;HaplotypeScore=128.3740;InbreedingCoeff=0.9390;MQ=60.88;MQ0=3;MQRankSum=-1.795;QD=18.26;ReadPosRankSum=4.592;VQSLOD=5.1791;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:33,0:33:53.77:418,54,0	1/1:2,0:2:5.96:44,6,0	0/0:28,0:14:35.86:0,36,315	0/0:18,0:13:27.03:0,27,283	1/1:30,1:31:75.61:609,76,0	1/1:22,0:23:47.80:377,48,0	1/1:18,2:20:50.85:423,51,0	1/1:33,2:35:98.74:811,99,0	1/1:17,1:18:26.95:228,27,0	1/1:27,2:30:78.96:629,79,0	1/1:20,2:23:59.60:474,60,0	1/1:17,4:21:35.24:284,35,0	1/1:20,2:22:59.01:495,59,0	1/1:13,3:17:35.70:280,36,0	0/0:13,0:13:19.42:0,19,212	1/1:22,0:23:44.46:344,44,0	1/1:28,0:28:80.81:625,81,0	1/1:21,0:22:59.78:474,60,0	1/1:11,0:11:32.12:244,32,0	1/1:30,0:30:74.16:536,74,0	1/1:16,1:17:20.77:173,21,0	1/1:19,1:20:56.76:457,57,0	1/1:12,1:13:38.78:310,39,0	1/1:24,0:24:47.87:382,48,0	1/1:16,0:16:32.92:264,33,0	1/1:20,0:21:59.72:464,60,0	1/1:28,0:27:41.41:323,41,0	1/1:5,0:5:8.91:66,9,0
chr10	27750398	.	G	GTT	2757.35	PASS	AB=0.585;AC=41;AF=0.732;AN=56;BaseQRankSum=2.509;DP=519;FS=5.889;HRun=11;HaplotypeScore=104.3818;InbreedingCoeff=-0.0565;MQ=76.00;MQ0=0;MQRankSum=-1.236;QD=5.54;ReadPosRankSum=3.895;VQSLOD=-0.0558;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:5,0:18:24.77:61,0,25	1/1:2,0:14:20.99:80,21,0	0/0:11,0:11:15.42:0,15,142	0/0:10,0:10:4.76:0,5,32	1/1:6,1:24:14.82:154,15,0	1/1:5,0:22:13.55:107,14,0	0/1:3,0:14:3.25:56,0,3	0/1:12,1:34:26.03:155,0,26	1/1:3,0:20:24.90:96,25,0	1/1:6,0:23:40.38:151,40,0	1/1:5,1:25:16.61:161,17,0	1/1:1,0:14:27.92:105,28,0	1/1:4,0:18:25.03:90,25,0	0/1:4,0:13:28.65:35,0,29	1/1:2,10:13:27.05:357,27,0	0/1:3,0:10:30.44:30,0,37	1/1:4,2:19:33.19:180,33,0	1/1:3,0:21:25.26:90,25,0	1/1:8,0:23:10.66:96,11,0	0/1:4,1:26:26.59:150,0,27	0/1:4,0:11:30.66:31,0,37	0/1:6,0:18:24.87:55,0,25	0/1:5,1:22:35.88:111,0,36	1/1:0,0:12:28.47:134,28,0	1/1:4,2:23:14.51:171,15,0	0/1:4,0:17:48.77:76,0,49	0/1:8,2:20:69.54:129,0,70	1/1:8,0:24:0.41:60,0,0
chr10	27751676	.	T	TTGTG	3743.60	PASS	AB=0.906;AC=48;AF=0.923;AN=52;BaseQRankSum=-4.138;DP=618;FS=1.411;HRun=0;HaplotypeScore=130.7726;InbreedingCoeff=0.2474;MQ=53.05;MQ0=19;MQRankSum=3.711;QD=7.12;ReadPosRankSum=-2.504;VQSLOD=2.5275;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:33,0:33:26.72:317,27,0	1/1:7,0:7:6.02:107,6,0	./.	./.	1/1:23,0:24:12.02:182,12,0	1/1:17,6:26:14.84:218,15,0	1/1:13,2:17:3.01:70,3,0	1/1:28,0:26:6.49:77,6,0	1/1:17,0:17:14.94:214,15,0	1/1:21,0:19:9.49:113,9,0	1/1:21,0:21:9.03:131,9,0	1/1:22,1:24:10.71:159,11,0	1/1:10,0:17:5.75:82,6,0	1/1:23,0:23:12.04:203,12,0	0/0:7,0:21:23.84:0,24,209	1/1:13,6:25:12.25:223,12,0	1/1:14,5:25:8.76:123,9,0	1/1:14,1:15:12.93:229,13,0	0/1:19,0:19:2.06:116,0,2	1/1:14,2:20:4:72,4,0	1/1:51,0:52:30.22:306,30,0	1/1:13,0:13:3.01:43,3,0	1/1:11,0:11:11.92:156,12,0	1/1:16,1:18:3.01:70,3,0	1/1:14,6:23:8.76:153,9,0	1/1:21,0:21:23.26:309,23,0	0/1:10,2:13:2.83:65,0,3	1/1:8,0:8:2.04:6,2,0
chr10	27752030	.	A	AT	12315.74	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-7.241;DP=438;FS=3.840;HRun=7;HaplotypeScore=38.1525;InbreedingCoeff=0.8381;MQ=69.20;MQ0=0;MQRankSum=-3.221;QD=30.19;ReadPosRankSum=3.461;VQSLOD=4.9220;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,16:16:42.13:507,42,0	1/1:1,3:4:6:72,6,0	0/0:6,0:6:11.85:0,12,99	0/0:8,0:8:15.02:0,15,143	1/1:3,24:27:69.17:817,69,0	1/1:2,18:20:45.14:544,45,0	1/1:0,6:6:12.04:145,12,0	1/1:8,34:42:99:1220,102,0	1/1:3,10:13:27.08:326,27,0	1/1:2,22:24:69.21:831,69,0	1/1:0,26:26:69.21:833,69,0	1/1:1,12:13:36.11:435,36,0	1/1:0,19:19:54.17:652,54,0	1/1:0,23:23:63.19:761,63,0	0/0:16,0:16:45.06:0,45,429	1/1:1,13:14:39.12:471,39,0	1/1:1,16:18:45.12:529,45,0	1/1:2,15:17:45.14:543,45,0	1/1:3,13:16:23.18:452,23,0	1/1:1,20:21:60.10:702,60,0	1/1:0,1:1:3.01:36,3,0	1/1:0,2:2:6.02:72,6,0	1/1:0,11:11:27.08:326,27,0	1/1:0,4:4:12.04:145,12,0	1/1:4,9:13:24.07:290,24,0	1/1:5,17:22:48.10:553,48,0	1/1:0,25:25:66.20:797,66,0	1/1:1,10:11:20.91:253,21,0
chr10	27752123	.	ATCAG	A	141.78	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.092;DP=445;FS=11.823;HRun=0;HaplotypeScore=70.6852;InbreedingCoeff=0.7908;MQ=64.72;MQ0=0;MQRankSum=-0.533;QD=23.63;ReadPosRankSum=-0.410;VQSLOD=2.2016;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:36.09:0,36,837	0/0:4,0:4:9:0,9,187	0/0:8,0:7:9.90:0,10,387	0/0:7,0:7:10.61:0,11,193	0/0:16,0:16:42.12:0,42,995	0/0:22,0:22:66.14:0,66,1443	0/0:15,0:15:45.13:0,45,1072	0/0:30,0:30:84.25:0,84,2022	0/0:18,0:18:51.13:0,51,1200	0/0:24,0:24:69.21:0,69,1698	0/0:37,0:37:99:0,105,2447	0/0:13,0:13:39.13:0,39,1045	0/0:16,0:16:45.11:0,45,995	0/0:18,0:18:51.06:0,51,1081	1/1:1,5:6:12.04:228,12,0	0/0:17,0:17:51.14:0,51,1255	0/0:16,0:15:42.13:0,42,1017	0/0:11,0:11:33.07:0,33,827	0/0:21,0:21:54.08:0,54,1163	0/0:17,0:17:48.14:0,48,1183	0/0:13,0:13:39.10:0,39,918	0/0:3,0:3:9.02:0,9,179	0/0:19,0:19:48.08:0,48,1024	0/0:6,0:6:18.06:0,18,486	0/0:13,0:13:36.11:0,36,856	0/0:19,0:19:57.18:0,57,1446	0/0:28,0:28:78.25:0,78,2007	0/0:14,0:14:42.14:0,42,1132
chr10	27755691	.	C	CGAGAGA	6547.09	PASS	AB=0.968;AC=53;AF=0.981;AN=54;BaseQRankSum=-1.877;DP=575;FS=0.000;HRun=0;HaplotypeScore=122.7159;InbreedingCoeff=-0.0322;MQ=66.14;MQ0=27;MQRankSum=0.017;QD=12.76;ReadPosRankSum=-0.499;VQSLOD=3.7262;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:15:15.02:161,15,0	1/1:1,2:3:3.01:47,3,0	1/1:50,0:20:2.51:7,3,0	./.	1/1:11,3:28:15.05:332,15,0	0/1:29,0:30:26.53:461,0,27	1/1:12,0:12:15.04:249,15,0	1/1:23,0:22:32.94:358,33,0	1/1:4,1:8:9.03:218,9,0	1/1:12,10:24:32.78:600,33,0	1/1:8,10:19:9.03:173,9,0	1/1:10,0:18:14.98:193,15,0	1/1:5,0:15:9.03:203,9,0	1/1:4,0:16:5.26:174,5,0	1/1:7,0:21:6.02:156,6,0	1/1:7,1:17:12.04:279,12,0	1/1:11,0:15:3.01:78,3,0	1/1:12,0:13:17.71:196,18,0	1/1:12,1:12:5.50:119,6,0	1/1:10,0:22:15.05:266,15,0	1/1:8,0:8:15.05:221,15,0	1/1:7,0:17:9.03:195,9,0	1/1:7,0:16:5.01:84,5,0	1/1:19,0:18:27.53:340,28,0	1/1:8,0:18:2.02:77,2,0	1/1:12,2:14:26.95:456,27,0	1/1:9,3:27:35.21:822,35,0	1/1:10,0:18:5.05:84,5,0
chr10	27755723	.	A	AG	791.05	PASS	AB=0.901;AC=14;AF=0.250;AN=56;BaseQRankSum=6.863;DP=475;FS=0.463;HRun=1;HaplotypeScore=85.6153;InbreedingCoeff=-0.3863;MQ=60.25;MQ0=21;MQRankSum=-5.218;QD=3.34;ReadPosRankSum=-1.181;VQSLOD=-0.4875;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:12,7:17:59.06:59,0,299	0/1:2,0:2:34.03:41,0,34	0/0:31,0:14:36.12:0,36,481	0/0:42,0:17:42.11:0,42,523	0/1:24,0:22:40.71:41,0,230	0/1:19,8:27:99:134,0,471	0/1:11,0:11:57.26:57,0,203	0/1:29,2:29:46.28:46,0,858	0/0:8,0:8:10.69:0,11,224	0/0:16,0:16:10.21:0,10,309	0/1:16,0:16:39.15:39,0,237	0/1:13,0:11:32.27:32,0,176	0/0:10,0:10:9.49:0,9,180	0/0:15,0:15:4.17:0,4,221	0/0:11,0:11:2.51:0,3,109	0/0:14,0:14:22.09:0,22,369	0/0:12,2:13:16.14:0,16,232	0/1:13,2:15:88.18:88,0,325	0/0:11,1:11:21.40:0,21,328	0/1:14,0:14:36.57:37,0,216	0/1:6,4:10:99:117,0,189	0/1:10,1:10:17.95:18,0,25	0/0:10,0:10:4.56:0,5,96	0/1:21,5:24:88.85:89,0,361	0/0:10,1:10:5.15:0,5,114	0/1:14,4:17:99:144,0,336	0/0:29,0:27:6.36:0,6,437	0/0:15,0:15:17.80:0,18,311
chr10	27756119	.	TAG	T	485.94	PASS	AB=0.980;AC=13;AF=0.295;AN=44;BaseQRankSum=3.962;DP=536;FS=11.962;HRun=0;HaplotypeScore=87.2854;InbreedingCoeff=-0.1621;MQ=84.97;MQ0=40;MQRankSum=-4.409;QD=2.11;ReadPosRankSum=1.727;VQSLOD=0.6331;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:12:9.30:0,9,72	0/0:4,0:4:3.94:0,4,27	0/1:60,2:35:32.37:32,0,308	0/0:110,1:46:20.96:0,21,330	0/0:15,0:15:4.05:0,4,102	0/1:27,0:26:30.36:30,0,131	./.	0/0:57,0:35:61.30:0,61,785	0/1:9,0:9:7.02:7,0,116	0/1:15,0:15:32.71:157,0,33	./.	0/0:11,0:11:6.01:0,6,83	0/0:6,0:6:0.47:0,0,1	./.	0/0:8,0:8:2.04:0,2,107	1/1:9,0:8:2.28:23,2,0	0/1:15,1:15:29.72:30,0,36	1/1:6,0:2:5.71:32,6,0	0/1:17,0:12:43.87:44,0,205	./.	./.	./.	0/0:7,0:7:3.01:0,3,58	0/0:9,0:9:0:0,0,0	0/0:10,0:9:9.03:0,9,163	0/1:18,0:16:87.36:156,0,87	0/1:18,1:19:67.34:67,0,119	0/1:27,0:23:33.23:33,0,442
chr10	27756121	.	GAT	G	1723.85	PASS	AB=0.741;AC=18;AF=0.409;AN=44;BaseQRankSum=0.840;DP=531;FS=2.904;HRun=0;HaplotypeScore=83.6044;InbreedingCoeff=-0.3044;MQ=87.39;MQ0=33;MQRankSum=-0.997;QD=4.74;ReadPosRankSum=3.959;VQSLOD=2.2759;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:7,5:11:24.50:24,0,25	0/0:1,3:4:0.94:0,1,2	0/0:71,1:37:9.88:0,10,345	0/1:120,1:50:17.32:17,0,274	0/1:15,0:15:19.50:19,0,53	0/1:7,19:25:58.02:58,0,81	./.	0/1:47,0:35:99:296,0,296	0/1:4,4:8:49.32:59,0,49	0/1:1,14:15:2.95:447,0,3	./.	0/0:11,0:11:3.01:0,3,47	0/0:1,5:6:0.47:0,0,1	./.	0/0:8,0:8:2.04:0,2,99	1/1:1,8:8:2.29:42,2,0	0/1:15,1:15:10.92:16,0,11	1/1:5,1:2:6.02:79,6,0	0/1:6,8:12:99:191,0,114	./.	./.	./.	0/0:2,5:7:3.01:0,3,48	1/1:2,7:9:2.97:20,3,0	0/0:3,6:9:9.02:0,9,107	0/1:5,13:16:10.63:393,0,11	0/1:7,12:19:62.75:84,0,63	0/1:14,13:23:99:105,0,336
chr10	27756124	.	A	AGC	543.07	PASS	AB=0.976;AC=20;AF=0.417;AN=48;BaseQRankSum=4.439;DP=556;FS=16.566;HRun=0;HaplotypeScore=94.7126;InbreedingCoeff=-0.1040;MQ=86.14;MQ0=29;MQRankSum=-3.848;QD=1.55;ReadPosRankSum=0.181;VQSLOD=0.7729;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:12:6.43:0,6,40	1/1:4,0:4:0.94:2,1,0	0/0:78,0:39:20.99:0,21,420	0/1:126,0:50:20.77:21,0,266	0/0:15,0:15:1.35:0,1,55	0/1:25,0:25:79.57:93,0,80	./.	0/1:45,0:37:17.78:18,0,402	0/1:7,2:9:48.79:94,0,49	0/1:16,0:16:34.05:94,0,34	./.	0/0:10,0:10:3.01:0,3,47	1/1:6,0:6:0.94:2,1,0	1/1:13,0:12:2.04:6,2,0	0/0:8,0:8:8.06:0,8,104	1/1:11,0:10:4.36:15,4,0	0/1:14,0:14:10.90:31,0,11	1/1:5,1:2:5.81:63,6,0	0/1:16,0:14:99:114,0,124	0/1:12,0:12:0:0,0,0	./.	./.	0/0:8,0:8:3.01:0,3,48	0/0:9,1:10:2.68:0,3,11	0/0:11,0:11:9.02:0,9,107	0/1:17,1:16:90.55:96,0,91	0/0:17,1:18:6.22:0,6,85	0/1:27,0:23:27.37:27,0,316
chr10	27756137	.	T	TAGAGAGAGAGAGAG	6651.77	PASS	AB=0.972;AC=44;AF=0.880;AN=50;BaseQRankSum=-2.777;DP=625;FS=1.750;HRun=0;HaplotypeScore=174.7982;InbreedingCoeff=0.3294;MQ=79.29;MQ0=16;MQRankSum=-1.511;QD=14.40;ReadPosRankSum=2.663;VQSLOD=3.8722;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:14:0.74:90,1,0	1/1:7,0:7:5.14:118,5,0	1/1:85,0:38:0.49:6,0,0	0/0:126,0:46:2.38:0,2,197	1/1:18,0:18:2.99:17,3,0	1/1:31,1:31:18.68:536,19,0	1/1:13,0:12:5.87:88,6,0	1/1:43,0:38:35.99:872,36,0	1/1:11,0:11:9.01:181,9,0	1/1:20,0:19:41.56:943,42,0	0/1:13,0:12:0:0,0,0	1/1:13,0:13:2.83:49,3,0	1/1:11,1:11:6.91:330,7,0	0/1:16,1:17:0.11:0,0,0	1/1:11,1:12:6.01:162,6,0	1/1:16,1:15:6.47:52,6,0	1/1:13,0:13:6.49:207,6,0	1/1:3,0:3:9:212,9,0	1/1:14,0:14:23.86:582,24,0	1/1:15,0:13:0.47:1,0,0	./.	0/0:8,0:8:0:0,0,0	./.	./.	1/1:14,0:14:3.16:73,3,0	1/1:26,0:25:59.88:1404,60,0	1/1:22,0:22:13.89:414,14,0	1/1:25,0:23:19.09:317,19,0
chr10	27756139	.	G	GCT	2960.37	PASS	AB=0.957;AC=19;AF=0.365;AN=52;BaseQRankSum=-5.897;DP=621;FS=4.559;HRun=0;HaplotypeScore=134.1915;InbreedingCoeff=-0.2928;MQ=78.71;MQ0=15;MQRankSum=1.339;QD=7.26;ReadPosRankSum=5.035;VQSLOD=2.8791;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:15,1:15:18.84:88,0,19	1/1:7,0:7:0.45:1,0,0	0/0:82,0:36:19.39:0,19,236	0/1:124,0:46:8.99:9,0,242	1/1:5,11:17:2.74:59,3,0	0/1:31,0:30:39.68:69,0,40	0/0:4,9:12:3.25:0,3,42	0/1:19,23:39:87.06:984,0,87	0/1:8,0:8:16.92:149,0,17	0/1:21,0:20:30.40:576,0,30	0/0:13,0:12:0:0,0,0	0/0:4,9:13:2.88:0,3,26	0/0:12,0:11:7.53:0,8,74	1/1:17,0:17:2.04:6,2,0	0/0:12,0:12:8.99:0,9,92	0/1:17,1:16:17.31:38,0,17	0/0:6,9:14:4.68:0,5,76	0/1:5,0:5:12.17:114,0,12	0/1:14,0:14:99:287,0,112	0/0:15,0:13:0:0,0,0	./.	0/0:7,0:7:0:0,0,0	./.	0/1:14,0:14:17.94:34,0,18	0/0:14,0:14:2.78:0,3,36	0/1:25,0:24:99:392,0,222	0/1:24,0:23:53.21:67,0,53	0/1:20,2:20:39.94:218,0,40
chr10	27757786	.	T	TG	365.84	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-4.508;DP=503;FS=0.000;HRun=0;HaplotypeScore=60.6280;InbreedingCoeff=0.7927;MQ=68.69;MQ0=1;MQRankSum=1.181;QD=28.14;ReadPosRankSum=-0.275;VQSLOD=3.8069;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:81.25:0,81,1096	0/0:5,0:5:15.04:0,15,194	0/0:10,0:9:18.05:0,18,220	0/0:5,0:4:6:0,6,63	0/0:31,0:31:90.28:0,90,1216	0/0:18,0:18:54.17:0,54,739	0/0:14,0:14:42.12:0,42,556	0/0:27,0:27:81.17:0,81,981	0/0:6,0:6:18.03:0,18,205	0/0:29,0:29:82.51:0,83,1137	0/0:27,0:27:81.17:0,81,1029	0/0:12,0:12:36.12:0,36,503	0/0:22,0:22:66.16:0,66,883	0/0:16,0:16:48.16:0,48,670	1/1:0,13:13:33.11:460,33,0	0/0:16,0:16:48.15:0,48,654	0/0:28,0:27:81.23:0,81,1076	0/0:16,0:16:45.11:0,45,589	0/0:19,0:19:54.99:0,55,688	0/0:26,0:26:78.25:0,78,1073	0/0:5,0:5:15.04:0,15,194	0/0:15,0:15:45.13:0,45,584	0/0:26,0:26:69.12:0,69,905	0/0:13,0:13:39.13:0,39,542	0/0:23,0:23:66.21:0,66,906	0/0:20,0:20:60.16:0,60,776	0/0:32,0:32:96.19:0,96,1248	0/0:2,0:2:6.01:0,6,68
chr10	27758181	.	G	GAC	240.95	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.781;DP=688;FS=15.130;HRun=0;HaplotypeScore=229.6289;InbreedingCoeff=0.5933;MQ=47.16;MQ0=12;MQRankSum=-4.716;QD=8.61;ReadPosRankSum=0.118;VQSLOD=1.9387;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:18:8.31:0,8,117	0/0:9,0:9:20.58:0,21,140	0/0:30,0:15:16.19:0,16,331	0/0:32,0:15:28.64:0,29,282	0/0:41,0:40:43.69:0,44,350	0/0:37,0:36:56.09:0,56,460	0/0:38,0:32:38.20:0,38,306	0/0:50,0:43:99:0,104,786	0/0:20,0:20:22.44:0,22,180	0/0:34,0:32:88.44:0,88,665	0/0:36,0:36:29.69:0,30,232	0/0:27,0:26:32.19:0,32,213	0/0:14,0:14:15.54:0,16,124	0/0:20,0:20:21.15:0,21,161	1/1:18,10:28:30.07:335,30,0	0/0:26,0:25:17.32:0,17,245	0/0:7,0:6:2.94:0,3,18	0/0:13,0:13:20.08:0,20,129	0/0:20,0:19:38.95:0,39,277	0/0:34,0:33:35.51:0,36,279	0/0:7,0:6:2.98:0,3,22	0/0:25,0:24:33.17:0,33,268	0/0:20,0:20:20.96:0,21,171	0/0:11,0:11:3.46:0,3,25	0/0:31,0:31:25.43:0,25,219	0/0:24,0:24:49.41:0,49,396	0/0:26,0:24:28.36:0,28,277	0/0:9,0:9:14.22:0,14,101
chr10	27758185	.	G	GAC	263	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.479;DP=688;FS=17.551;HRun=0;HaplotypeScore=242.2191;InbreedingCoeff=0.5211;MQ=46.18;MQ0=12;MQRankSum=-3.828;QD=10.12;ReadPosRankSum=0.340;VQSLOD=2.0216;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:18:5.31:0,5,91	0/0:9,0:9:20.59:0,21,136	0/0:29,0:14:3.42:0,3,342	0/0:30,0:13:13.02:0,13,214	0/0:41,0:40:39.79:0,40,322	0/0:37,0:36:71.81:0,72,496	0/0:39,0:32:33.44:0,33,265	0/0:50,0:43:99:0,103,762	0/0:19,0:19:23.42:0,23,192	0/0:32,0:30:83.16:0,83,618	0/0:37,0:37:26.65:0,27,206	0/0:27,0:26:23.20:0,23,149	0/0:14,0:14:18.49:0,18,143	0/0:22,0:22:22.70:0,23,156	1/1:16,10:26:33.06:357,33,0	0/0:27,0:26:15.89:0,16,201	0/0:6,0:5:2.90:0,3,16	0/0:14,0:14:17.94:0,18,110	0/0:20,0:19:39.72:0,40,262	0/0:33,0:32:35.21:0,35,255	0/0:6,0:5:2.98:0,3,21	0/0:25,0:24:33.12:0,33,261	0/0:19,0:19:17.97:0,18,148	0/0:14,0:14:2.60:0,3,10	0/0:29,0:29:25.88:0,26,200	0/0:28,0:28:63.64:0,64,466	0/0:27,0:25:33.66:0,34,297	0/0:9,0:9:14.22:0,14,101
chr10	27758197	.	G	GAC	2512.41	PASS	AB=0.921;AC=24;AF=0.429;AN=56;BaseQRankSum=5.504;DP=673;FS=22.234;HRun=0;HaplotypeScore=252.2507;InbreedingCoeff=-0.4909;MQ=40.54;MQ0=10;MQRankSum=-4.469;QD=4.74;ReadPosRankSum=-2.993;VQSLOD=1.3696;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:21,1:21:51.16:51,0,54	0/1:7,3:10:41.01:90,0,41	0/0:25,0:9:23.81:0,24,251	0/0:20,0:7:9.19:0,9,125	0/0:39,3:41:30.75:0,31,247	0/1:27,3:29:99:211,0,171	0/1:37,0:30:99:146,0,99	0/1:50,0:43:64.81:65,0,390	0/1:13,5:18:99:118,0,143	0/1:30,1:30:99:169,0,321	0/1:32,3:35:46.78:47,0,125	0/1:24,2:25:56.36:119,0,56	0/1:13,2:15:68.91:122,0,69	0/1:16,2:18:75.56:121,0,76	0/0:24,0:24:31.88:0,32,152	0/1:22,3:24:90.49:111,0,90	0/1:8,0:7:6.85:38,0,7	0/1:10,0:10:45.05:60,0,45	0/1:20,1:20:99:375,0,112	0/1:31,4:34:74:74,0,115	1/1:8,0:7:2.99:24,3,0	0/1:26,1:26:11.06:11,0,142	0/0:21,2:23:11.97:0,12,97	1/1:13,1:14:8.80:85,9,0	0/1:25,7:32:90.84:160,0,91	0/1:27,1:28:99:435,0,215	0/1:27,3:28:44.64:45,0,169	0/0:9,0:9:14.21:0,14,101
chr10	27758225	.	G	GAC	10133.77	PASS	AB=0.644;AC=43;AF=0.768;AN=56;BaseQRankSum=-1.103;DP=617;FS=8.153;HRun=0;HaplotypeScore=233.9846;InbreedingCoeff=0.0233;MQ=36.10;MQ0=8;MQRankSum=3.418;QD=18.13;ReadPosRankSum=5.750;VQSLOD=3.2303;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,8:17:15.05:275,15,0	1/1:6,6:12:3.20:314,3,0	0/0:26,0:9:20.20:0,20,294	0/0:32,0:18:35.16:0,35,488	1/1:16,15:30:5.92:116,6,0	0/1:10,14:23:2.76:481,0,3	1/1:15,12:20:26.34:514,26,0	0/1:22,24:43:99:960,0,298	0/1:7,9:16:9.02:322,0,9	0/1:13,13:26:92.91:724,0,93	1/1:15,10:25:9:139,9,0	1/1:8,16:23:26.45:478,26,0	1/1:7,9:16:18.40:419,18,0	0/1:9,11:20:4.82:233,0,5	1/1:3,21:24:36.12:680,36,0	1/1:8,15:22:5.94:359,6,0	1/1:2,6:7:6.02:108,6,0	0/1:6,3:9:6.98:174,0,7	0/1:8,16:24:89.62:789,0,90	1/1:15,15:29:12.24:276,12,0	1/1:3,5:7:6.02:116,6,0	1/1:13,8:20:3.44:58,3,0	1/1:8,16:24:2.30:57,2,0	1/1:5,10:15:8.90:173,9,0	1/1:9,16:25:21.82:367,22,0	0/1:8,24:32:38.80:1335,0,39	0/1:12,16:26:17.93:553,0,18	1/1:0,2:2:6.02:115,6,0
chr10	27758279	.	AAGAC	A	23150.57	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-5.223;DP=721;FS=5.889;HRun=0;HaplotypeScore=199.8258;InbreedingCoeff=0.9434;MQ=59.18;MQ0=4;MQRankSum=-0.579;QD=38.08;ReadPosRankSum=4.483;VQSLOD=4.4466;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,27:31:41.45:1057,41,0	1/1:0,13:13:38.98:623,39,0	0/0:40,0:33:52.49:0,52,1548	0/0:45,0:31:19.55:0,20,1111	1/1:3,19:22:50.94:744,51,0	1/1:3,27:29:75.02:1217,75,0	1/1:1,22:21:39.09:700,39,0	1/1:2,34:32:70.80:1295,71,0	1/1:0,19:19:48.04:799,48,0	1/1:1,31:32:93.30:1699,93,0	1/1:1,23:24:68.46:847,68,0	1/1:2,22:24:66.04:1097,66,0	1/1:3,16:19:36.01:587,36,0	1/1:3,22:25:54:905,54,0	0/0:16,0:26:62.56:0,63,833	1/1:6,24:30:66.18:1214,66,0	1/1:2,16:17:18.06:341,18,0	1/1:2,14:16:4.25:540,4,0	1/1:8,8:15:33.06:517,33,0	1/1:1,40:41:99:1584,111,0	1/1:1,26:26:56.94:894,57,0	1/1:1,24:25:71.92:1137,72,0	1/1:1,25:26:63.04:1075,63,0	1/1:4,19:23:32.47:579,32,0	1/1:2,22:24:53.94:834,54,0	1/1:7,17:24:69.13:1170,69,0	1/1:3,29:31:78.14:1357,78,0	1/1:0,8:8:18.06:339,18,0
chr10	27758332	.	A	AGG	296.62	PASS	AB=0.750;AC=1;AF=0.018;AN=56;BaseQRankSum=5.111;DP=716;FS=0.000;HRun=1;HaplotypeScore=154.6702;InbreedingCoeff=-0.0183;MQ=73.53;MQ0=0;MQRankSum=-2.694;QD=12.36;ReadPosRankSum=-0.650;VQSLOD=0.1063;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:41:96.24:0,96,1403	0/0:13,0:13:39.13:0,39,595	0/0:36,0:34:73.98:0,74,1123	0/0:39,0:36:77.59:0,78,1058	0/0:26,0:26:69.23:0,69,1047	0/0:27,0:26:66.22:0,66,1001	0/0:21,0:19:42.14:0,42,633	0/0:34,0:33:78.23:0,78,1139	0/0:21,0:21:57.19:0,57,872	0/0:28,0:28:78.25:0,78,1147	0/0:24,0:24:66.22:0,66,1004	0/0:20,0:20:57.19:0,57,870	0/0:12,0:12:27.04:0,27,386	0/0:27,0:27:60.19:0,60,918	0/1:16,8:24:99:371,0,554	0/0:22,0:22:51.13:0,51,755	0/0:24,0:23:54.18:0,54,819	0/0:11,0:11:30.10:0,30,459	0/0:27,0:27:69.20:0,69,997	0/0:41,0:41:90.29:0,90,1357	0/0:44,0:43:99:0,102,1539	0/0:22,0:22:51.17:0,51,781	0/0:24,0:24:57.15:0,57,809	0/0:17,0:17:38.56:0,39,568	0/0:20,0:20:51.17:0,51,771	0/0:32,0:32:96.33:0,96,1470	0/0:28,0:27:69.23:0,69,1049	0/0:10,0:10:24.08:0,24,361
chr10	27760753	.	GCACACACACACACACACACACACACACA	G	4247.54	PASS	AB=0.750;AC=35;AF=0.729;AN=48;BaseQRankSum=4.982;DP=443;FS=0.000;HRun=0;HaplotypeScore=297.0020;InbreedingCoeff=0.4674;MQ=48.76;MQ0=24;MQRankSum=-0.291;QD=15.67;ReadPosRankSum=2.709;VQSLOD=2.7714;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:16:8.55:85,9,0	1/1:3,0:4:3.01:172,3,0	0/0:27,0:17:9.03:0,9,421	0/0:34,0:25:42.03:0,42,1474	1/1:9,0:11:9.03:192,9,0	1/1:18,2:20:2.86:48,3,0	./.	1/1:21,0:21:6.48:57,6,0	1/1:5,0:10:3.48:76,3,0	0/1:14,7:21:12.62:151,0,13	./.	1/1:13,0:13:15.05:399,15,0	1/1:10,0:16:24.05:1099,24,0	1/1:15,5:19:3.01:72,3,0	0/0:20,0:19:5.87:0,6,468	1/1:10,1:11:3.01:107,3,0	0/0:14,0:14:3.73:0,4,191	1/1:9,0:7:2.37:8,2,0	1/1:5,0:5:9.02:233,9,0	1/1:11,0:10:5.99:121,6,0	1/1:9,0:5:6:97,6,0	0/0:6,5:12:3.01:0,3,73	./.	0/0:7,0:6:3.01:0,3,71	./.	1/1:18,0:25:24.04:606,24,0	1/1:23,0:26:21.03:511,21,0	1/1:4,7:11:3.01:216,3,0
chr10	27762226	.	GCACACACACA	G	10618.91	PASS	AB=0.765;AC=47;AF=0.904;AN=52;BaseQRankSum=-2.702;DP=441;FS=3.482;HRun=0;HaplotypeScore=144.7838;InbreedingCoeff=0.2655;MQ=51.58;MQ0=10;MQRankSum=-3.553;QD=26.75;ReadPosRankSum=1.190;VQSLOD=4.4646;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,10:25:14.95:153,15,0	1/1:3,3:7:12:237,12,0	./.	./.	1/1:4,10:14:15.05:335,15,0	1/1:11,10:24:29.42:815,29,0	1/1:9,7:16:9.03:236,9,0	0/1:15,0:15:48.60:49,0,77	1/1:7,11:18:27.09:728,27,0	1/1:10,12:23:39.11:822,39,0	1/1:8,6:14:12:249,12,0	1/1:5,8:14:27.03:611,27,0	1/1:5,8:14:24.08:698,24,0	1/1:6,10:17:21.04:609,21,0	0/0:6,0:19:38.92:0,39,974	1/1:4,7:11:14.98:297,15,0	0/1:8,7:15:77.01:258,0,77	1/1:10,5:17:12.48:221,12,0	1/1:5,6:11:18.06:510,18,0	1/1:6,13:19:29.31:666,29,0	1/1:7,0:6:1.95:6,2,0	1/1:6,10:17:12.98:362,13,0	1/1:9,7:17:8.68:250,9,0	1/1:12,6:18:6.02:178,6,0	0/1:7,10:19:11.52:761,0,12	1/1:5,7:13:24.08:651,24,0	1/1:3,11:16:27.09:769,27,0	1/1:12,0:11:11.98:147,12,0
chr10	27762793	.	TA	T	18661.74	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=2.417;DP=510;FS=10.752;HRun=1;HaplotypeScore=113.2251;InbreedingCoeff=0.9421;MQ=67.89;MQ0=0;MQRankSum=-5.299;QD=38.32;ReadPosRankSum=4.855;VQSLOD=3.8384;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,21:22:43.77:813,44,0	1/1:0,8:8:24.08:336,24,0	0/0:11,0:11:33.10:0,33,484	0/0:12,0:12:30.05:0,30,435	1/1:0,23:23:66.12:868,66,0	1/1:0,17:17:45.15:629,45,0	1/1:1,10:11:27.09:378,27,0	1/1:0,27:27:81.25:1100,81,0	1/1:0,7:7:21.07:294,21,0	1/1:0,25:25:75.25:1048,75,0	1/1:0,29:29:81.27:1129,81,0	1/1:0,9:9:27.09:378,27,0	1/1:0,12:12:33.11:462,33,0	1/1:0,22:22:60.20:839,60,0	1/1:0,22:22:57.19:792,57,0	1/1:0,19:19:45.15:629,45,0	1/1:0,17:17:45.15:629,45,0	1/1:2,20:22:53.11:753,53,0	1/1:0,27:27:75.25:1042,75,0	1/1:0,19:19:57.19:797,57,0	1/1:0,23:23:69.23:965,69,0	1/1:0,8:8:21.07:294,21,0	1/1:0,20:20:57.19:797,57,0	1/1:0,11:11:33.11:461,33,0	1/1:0,27:27:66.22:923,66,0	1/1:0,22:22:66.22:923,66,0	1/1:0,33:33:93.31:1300,93,0	1/1:0,5:5:6.02:84,6,0
chr10	27763642	.	CAAAAA	C	21936.53	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-5.575;DP=653;FS=0.786;HRun=13;HaplotypeScore=168.9136;InbreedingCoeff=0.9863;MQ=61.44;MQ0=2;MQRankSum=-4.562;QD=35.84;ReadPosRankSum=5.041;VQSLOD=1.9710;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,23:27:59.64:983,60,0	1/1:2,10:12:27.06:461,27,0	0/0:17,0:13:33.07:0,33,584	0/0:24,0:19:32.90:0,33,690	1/1:10,22:32:50.67:838,51,0	1/1:3,24:28:62.67:1033,63,0	1/1:4,18:22:45.11:768,45,0	1/1:9,28:37:84.09:1319,84,0	1/1:6,17:23:51.11:872,51,0	1/1:1,21:22:63.12:1026,63,0	1/1:2,15:17:41.99:684,42,0	1/1:4,18:22:45.11:769,45,0	1/1:1,19:20:50.75:870,51,0	1/1:5,33:38:75.17:1284,75,0	1/1:4,22:27:53.63:883,54,0	1/1:3,30:33:77.85:1334,78,0	1/1:5,19:25:28.29:702,28,0	1/1:3,13:16:15.24:544,15,0	1/1:6,23:30:72.03:1096,72,0	1/1:4,30:34:81.18:1383,81,0	1/1:1,11:12:29.65:512,30,0	1/1:4,14:18:35.87:588,36,0	1/1:3,12:15:30.04:510,30,0	1/1:7,18:25:36.08:614,36,0	1/1:6,22:28:48.10:820,48,0	1/1:2,19:21:54.11:864,54,0	1/1:2,20:22:51.15:873,51,0	1/1:0,6:6:18.06:308,18,0
chr10	27766531	.	CT	C	16364.46	PASS	AB=0.562;AC=48;AF=0.857;AN=56;BaseQRankSum=3.527;DP=706;FS=1.736;HRun=5;HaplotypeScore=72.3404;InbreedingCoeff=0.6437;MQ=58.38;MQ0=20;MQRankSum=2.409;QD=26.35;ReadPosRankSum=3.443;VQSLOD=4.6561;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:7,45:51:2.53:1139,0,3	1/1:2,5:7:15.04:170,15,0	0/0:25,0:11:24.08:0,24,315	0/0:31,0:15:27.18:0,27,454	1/1:7,26:30:69.19:781,69,0	1/1:2,19:21:54.15:613,54,0	0/1:9,21:26:18.76:584,0,19	1/1:8,21:26:22.13:622,22,0	1/1:0,20:20:48.14:545,48,0	1/1:4,37:39:99:1243,111,0	1/1:3,20:22:48.13:545,48,0	1/1:3,21:21:51.15:579,51,0	1/1:0,20:20:57.16:647,57,0	1/1:1,34:35:87.25:986,87,0	0/0:28,0:28:81.27:0,81,1108	1/1:1,20:21:57.16:647,57,0	1/1:1,30:31:84.24:953,84,0	1/1:1,16:17:1.12:401,1,0	1/1:7,13:14:36.09:401,36,0	1/1:5,22:24:63.18:715,63,0	1/1:3,15:18:4.12:435,4,0	1/1:4,17:20:30.29:517,30,0	1/1:2,17:19:42.12:476,42,0	1/1:4,32:36:93.26:1055,93,0	1/1:0,19:19:57.16:647,57,0	1/1:3,33:34:99:1123,99,0	1/1:1,18:19:41.94:476,42,0	1/1:0,2:2:6.02:68,6,0
chr10	27767731	.	G	GA	26521.72	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-7.773;DP=708;FS=16.751;HRun=2;HaplotypeScore=57.1946;InbreedingCoeff=0.9696;MQ=80.71;MQ0=0;MQRankSum=-9.110;QD=39.35;ReadPosRankSum=5.109;VQSLOD=3.0874;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,25:25:72.24:1031,72,0	1/1:0,9:9:27.09:389,27,0	0/0:21,0:21:50.82:0,51,596	0/0:13,0:13:36.07:0,36,415	1/1:0,41:41:99:1661,117,0	1/1:1,24:25:69.23:993,69,0	1/1:2,24:26:69.23:994,69,0	1/1:0,30:30:90.24:1219,90,0	1/1:3,20:23:51.17:734,51,0	1/1:0,45:45:99:1909,135,0	1/1:2,34:36:96.28:1358,96,0	1/1:2,24:26:72.24:1036,72,0	1/1:1,33:34:96.32:1382,96,0	1/1:2,20:22:57.19:821,57,0	1/1:0,29:29:87.29:1253,87,0	1/1:2,27:29:81.27:1167,81,0	1/1:0,11:11:27.09:389,27,0	1/1:0,3:3:9.03:126,9,0	1/1:1,28:29:81.25:1126,81,0	1/1:1,33:34:93.31:1339,93,0	1/1:0,26:26:66.19:928,66,0	1/1:2,20:22:57.19:821,57,0	1/1:2,24:26:69.23:993,69,0	1/1:1,24:25:69.23:994,69,0	1/1:2,20:23:63.21:905,63,0	1/1:1,25:26:75.25:1078,75,0	1/1:1,36:37:99:1399,99,0	1/1:0,12:12:33.11:475,33,0
chr10	27768284	.	CT	C	10699.63	PASS	AC=52;AF=0.963;AN=54;BaseQRankSum=-1.732;DP=514;FS=0.000;HRun=5;HaplotypeScore=106.9031;InbreedingCoeff=0.6879;MQ=46.03;MQ0=36;MQRankSum=-1.732;QD=21.93;ReadPosRankSum=1.055;VQSLOD=3.3373;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,24:22:24.07:272,24,0	1/1:0,5:4:12.03:136,12,0	0/0:15,0:1:2.97:0,3,20	./.	1/1:1,18:16:30.08:337,30,0	1/1:1,27:27:45.02:508,45,0	1/1:1,15:14:30.08:338,30,0	1/1:3,16:17:42.12:476,42,0	1/1:0,12:12:36.10:405,36,0	1/1:2,22:24:66.16:738,66,0	1/1:1,17:16:39.10:442,39,0	1/1:1,15:15:30.08:339,30,0	1/1:0,27:26:57.16:646,57,0	1/1:0,21:21:45.13:506,45,0	1/1:2,15:16:21.06:238,21,0	1/1:2,22:24:54.15:611,54,0	1/1:1,11:11:18.05:204,18,0	1/1:0,10:9:21.06:238,21,0	1/1:3,20:20:51.15:578,51,0	1/1:0,22:15:42.12:469,42,0	1/1:0,11:8:18.05:202,18,0	1/1:1,14:12:27.08:304,27,0	1/1:0,16:13:30.08:334,30,0	1/1:0,20:17:27.08:306,27,0	1/1:2,9:8:12.03:136,12,0	1/1:1,22:22:60.16:680,60,0	1/1:0,44:43:99:1119,99,0	1/1:0,10:6:12.03:136,12,0
chr10	27768562	.	TTGTGTG	T	5477.76	PASS	AB=0.602;AC=37;AF=0.771;AN=48;BaseQRankSum=-3.186;DP=378;FS=44.554;HRun=0;HaplotypeScore=73.4829;InbreedingCoeff=0.2819;MQ=55.70;MQ0=3;MQRankSum=-4.865;QD=19.02;ReadPosRankSum=4.577;VQSLOD=2.5684;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:6,9:15:6.92:309,0,7	./.	0/0:32,0:20:41.16:0,41,977	0/0:17,0:12:24.01:0,24,645	1/1:2,9:10:3.01:65,3,0	1/1:2,12:14:24.08:524,24,0	1/1:7,5:12:3.01:65,3,0	1/1:15,12:26:33.11:609,33,0	1/1:2,9:11:15.05:327,15,0	./.	./.	1/1:5,4:9:6.02:131,6,0	1/1:2,8:9:9.03:196,9,0	1/1:4,11:15:18.06:393,18,0	0/0:9,0:24:27.09:0,27,680	1/1:5,7:12:12.04:262,12,0	0/1:3,7:10:0.21:184,0,0	0/1:2,5:7:64.84:137,0,65	0/1:9,10:19:47.32:449,0,47	1/1:2,20:17:15.05:327,15,0	1/1:8,6:14:6.02:131,6,0	1/1:2,7:7:3.01:65,3,0	1/1:2,12:13:6.01:131,6,0	1/1:8,5:13:3.01:65,3,0	1/1:1,12:11:12.04:262,12,0	0/1:4,15:19:51.28:701,0,51	1/1:11,1:12:8.99:143,9,0	./.
chr10	27768662	.	A	ATGTGTGTGTGTG	9137.67	PASS	AB=0.797;AC=46;AF=0.852;AN=54;BaseQRankSum=1.907;DP=502;FS=6.539;HRun=0;HaplotypeScore=196.6597;InbreedingCoeff=0.5115;MQ=61.94;MQ0=3;MQRankSum=-6.494;QD=21.45;ReadPosRankSum=2.091;VQSLOD=3.5038;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:15,0:14:0:0,0,0	0/1:1,0:3:0:0,0,0	0/0:30,0:21:17.35:0,17,962	0/0:38,0:35:53.70:0,54,1574	1/1:15,1:17:5.96:89,6,0	1/1:11,0:11:9.03:318,9,0	1/1:13,0:13:12.04:318,12,0	1/1:47,0:46:81.17:1566,81,0	1/1:12,0:13:15.05:550,15,0	1/1:19,0:17:13.18:696,13,0	1/1:10,0:10:3.01:73,3,0	0/1:6,14:20:0:0,0,0	1/1:22,3:26:27.02:719,27,0	1/1:16,1:17:3.01:178,3,0	1/1:15,0:18:13.45:191,13,0	1/1:19,1:20:8.97:345,9,0	1/1:15,0:15:15.05:307,15,0	1/1:10,0:10:18.06:409,18,0	1/1:14,0:15:2.04:290,2,0	1/1:19,0:19:9.03:177,9,0	1/1:18,0:18:6.02:124,6,0	1/1:10,0:11:3.01:43,3,0	./.	1/1:19,0:20:2.88:40,3,0	0/1:21,0:18:0:0,0,0	1/1:14,1:14:30.06:804,30,0	1/1:12,11:26:32.98:1763,33,0	1/1:5,0:5:6.02:138,6,0
chr10	27768674	.	GTC	G	1211.29	PASS	AB=0.952;AC=35;AF=0.648;AN=54;BaseQRankSum=-1.484;DP=490;FS=0.614;HRun=0;HaplotypeScore=169.0816;InbreedingCoeff=-0.0563;MQ=50.33;MQ0=3;MQRankSum=0.166;QD=2.84;ReadPosRankSum=-7.992;VQSLOD=-0.0045;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:15:2.94:23,3,0	1/1:5,0:5:4.78:35,5,0	0/1:39,1:23:6.32:6,0,704	0/0:32,0:28:58.81:0,59,905	0/0:14,0:14:1.53:0,2,4	1/1:14,0:14:6.53:55,7,0	0/1:13,1:14:16.37:96,0,16	0/1:33,2:35:99:122,0,218	0/1:12,2:14:42.91:43,0,43	0/1:19,1:18:62.02:186,0,62	0/0:7,0:7:0.89:0,1,2	1/1:16,1:17:2.94:19,3,0	0/1:27,1:28:13.97:44,0,14	0/1:11,3:14:0:0,0,0	1/1:21,0:21:6.84:108,7,0	0/1:19,0:18:2.85:13,0,3	1/1:11,0:11:8.42:56,8,0	1/1:12,0:12:16.08:119,16,0	0/1:9,1:10:2.46:94,0,2	0/1:18,0:18:22.81:49,0,23	1/1:17,0:17:2.48:23,2,0	./.	0/1:7,0:6:0:0,0,0	1/1:22,0:22:5:29,5,0	1/1:26,0:23:9.39:70,9,0	0/1:19,0:18:97.11:117,0,97	0/1:25,0:24:0.76:1,0,80	1/1:2,0:2:5.97:44,6,0
chr10	27768774	.	T	TGTAAGGGTGG	3942.10	PASS	AB=0.964;AC=52;AF=0.963;AN=54;BaseQRankSum=0.887;DP=146;FS=6.065;HRun=0;HaplotypeScore=105.5097;InbreedingCoeff=0.0199;MQ=42.48;MQ0=0;MQRankSum=0.804;QD=27.96;ReadPosRankSum=1.114;VQSLOD=2.7128;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,0:4:5.93:70,6,0	1/1:0,0:2:4.90:18,5,0	./.	0/1:12,0:9:40.55:41,0,57	1/1:1,0:6:8.78:169,9,0	1/1:1,0:2:3:27,3,0	1/1:1,0:4:6:62,6,0	1/1:1,0:1:2.88:15,3,0	1/1:2,0:3:3:28,3,0	1/1:1,0:3:6.47:92,6,0	1/1:2,0:9:23.60:411,24,0	1/1:0,0:6:15.89:135,16,0	1/1:0,0:6:18:249,18,0	1/1:7,0:11:8.55:160,9,0	1/1:0,0:6:9.49:166,9,0	1/1:1,0:8:14.53:220,15,0	1/1:1,0:3:6.02:133,6,0	1/1:1,0:5:8.06:153,8,0	1/1:0,0:1:3.01:36,3,0	1/1:1,0:7:17.84:240,18,0	0/1:1,0:1:0:0,0,0	1/1:0,0:4:8.99:158,9,0	1/1:0,0:6:17.57:207,18,0	1/1:1,0:2:3:26,3,0	1/1:1,0:10:26.70:398,27,0	1/1:0,0:7:21.05:317,21,0	1/1:2,0:5:5.60:86,6,0	1/1:0,0:4:12.01:323,12,0
chr10	27770036	.	AT	A	14676.01	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=8.042;DP=676;FS=1.738;HRun=8;HaplotypeScore=82.1955;InbreedingCoeff=0.9604;MQ=77.29;MQ0=0;MQRankSum=-4.725;QD=23.94;ReadPosRankSum=3.698;VQSLOD=5.4874;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,21:25:54.08:521,54,0	1/1:1,7:8:17.94:174,18,0	0/0:15,0:15:36.10:0,36,427	0/0:16,0:16:45.13:0,45,530	1/1:4,26:30:69.09:666,69,0	1/1:1,25:26:72.11:695,72,0	1/1:4,19:23:51.07:493,51,0	1/1:5,26:31:78.11:747,78,0	1/1:0,20:20:60.10:579,60,0	1/1:2,31:33:90.11:859,90,0	1/1:2,18:20:48.07:464,48,0	1/1:0,24:24:66.11:637,66,0	1/1:3,32:35:84.13:811,84,0	1/1:3,30:33:84.13:811,84,0	0/0:32,0:32:84.20:0,84,978	1/1:3,37:40:99:1043,108,0	1/1:3,16:19:48.08:464,48,0	1/1:4,5:9:5.99:58,6,0	1/1:5,21:26:60.06:572,60,0	1/1:5,26:31:72.10:695,72,0	1/1:3,19:22:51.08:493,51,0	1/1:2,18:20:51.07:493,51,0	1/1:2,22:24:60.09:579,60,0	1/1:2,13:15:30.04:290,30,0	1/1:3,17:20:45.07:435,45,0	1/1:1,35:36:99:997,105,0	1/1:1,31:32:84.14:811,84,0	1/1:0,11:11:30.05:290,30,0
chr10	27770999	.	T	TTTTGG	22845.97	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-3.380;DP=635;FS=2.939;HRun=0;HaplotypeScore=119.6353;InbreedingCoeff=0.9460;MQ=68.74;MQ0=0;MQRankSum=-5.629;QD=42.23;ReadPosRankSum=1.903;VQSLOD=4.7116;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,17:33:32.70:856,33,0	1/1:1,8:10:18.06:516,18,0	0/0:27,0:23:16.90:0,17,355	0/0:33,0:28:32.80:0,33,532	1/1:6,18:24:45.15:1107,45,0	1/1:9,16:25:39.13:1119,39,0	1/1:11,7:19:21.07:602,21,0	1/1:19,15:34:41.92:759,42,0	1/1:3,20:24:39.13:1118,39,0	1/1:6,21:27:57.13:1348,57,0	1/1:3,16:20:42.14:1095,42,0	1/1:4,19:24:48.16:1376,48,0	1/1:7,14:22:40.02:1116,40,0	1/1:6,16:22:36.12:1031,36,0	0/0:34,0:34:72.25:0,72,1332	1/1:4,23:28:45.15:1290,45,0	1/1:5,18:24:36.07:966,36,0	1/1:6,8:15:6.25:289,6,0	1/1:10,8:18:26.99:487,27,0	1/1:4,15:19:45.15:1274,45,0	1/1:6,9:15:21.07:549,21,0	1/1:6,6:12:15.05:366,15,0	1/1:4,12:17:27.09:772,27,0	1/1:8,14:22:24.08:673,24,0	1/1:2,11:13:27.09:774,27,0	1/1:2,23:27:72.16:1879,72,0	1/1:10,23:32:36.01:968,36,0	1/1:4,10:14:18.06:516,18,0
chr10	27771208	.	T	TAAATA	10214.09	PASS	AB=0.701;AC=44;AF=0.880;AN=50;BaseQRankSum=-3.318;DP=228;FS=1.634;HRun=0;HaplotypeScore=27.7481;InbreedingCoeff=0.1144;MQ=57.57;MQ0=2;MQRankSum=0.941;QD=45.60;ReadPosRankSum=0.777;VQSLOD=4.5985;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,4:14:27.06:646,27,0	0/1:0,0:2:2.40:71,0,2	0/0:2,0:1:3.01:0,3,37	./.	1/1:1,13:14:30.10:626,30,0	1/1:1,9:12:15.05:476,15,0	1/1:0,0:3:6.02:117,6,0	1/1:3,23:32:93.31:2031,93,0	0/1:4,0:6:25.02:173,0,25	1/1:1,5:6:15.05:353,15,0	1/1:2,3:5:9.03:170,9,0	./.	1/1:0,4:5:9.03:280,9,0	1/1:0,1:1:3.01:95,3,0	0/1:3,0:3:7.91:8,0,118	1/1:0,5:5:6.02:190,6,0	1/1:1,25:26:45.15:1405,45,0	0/1:1,3:5:1.37:90,0,1	1/1:1,8:9:24.08:677,24,0	1/1:1,5:6:6.02:190,6,0	1/1:1,7:9:9.03:285,9,0	1/1:1,0:2:6.02:114,6,0	1/1:1,2:4:6.02:166,6,0	./.	1/1:1,10:13:18.06:570,18,0	1/1:1,5:7:18.06:425,18,0	1/1:3,10:15:27.09:751,27,0	1/1:1,16:19:12:305,12,0
chr10	27772230	.	CT	C	228.73	PASS	AB=0.900;AC=4;AF=0.071;AN=56;BaseQRankSum=0.183;DP=566;FS=0.798;HRun=11;HaplotypeScore=99.8506;InbreedingCoeff=0.4501;MQ=64.91;MQ0=7;MQRankSum=0.088;QD=5.32;ReadPosRankSum=-0.328;VQSLOD=1.8584;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,114,1183	0/0:12,0:12:33.08:0,33,349	0/0:15,0:11:25.94:0,26,194	0/0:15,2:13:2.73:0,3,147	0/0:27,1:31:28.51:0,29,647	0/0:24,0:25:54.77:0,55,546	0/0:15,1:15:36.02:0,36,366	0/0:32,0:30:65.39:0,65,670	0/0:13,0:14:32.90:0,33,326	0/0:27,0:26:57.14:0,57,608	0/0:34,2:35:31.76:0,32,714	0/0:22,0:22:51.06:0,51,530	0/0:20,0:21:53.88:0,54,528	0/0:11,0:11:27.05:0,27,280	1/1:2,14:16:38.94:320,39,0	0/0:19,0:19:51.09:0,51,525	0/0:24,0:23:50.43:0,50,569	0/0:5,0:5:12.03:0,12,128	0/0:20,0:20:42.10:0,42,445	0/0:30,0:31:68.84:0,69,699	0/1:8,1:9:3.60:4,0,164	0/0:14,0:14:33.04:0,33,338	0/0:16,1:17:12.53:0,13,328	0/0:18,1:19:39.06:0,39,400	0/0:17,0:17:33.04:0,33,340	0/0:19,0:18:39.10:0,39,416	0/1:16,2:18:10.19:10,0,306	0/0:13,0:13:27.07:0,27,288
chr10	27772248	.	C	CTT	14977.43	PASS	AB=1.000;AC=51;AF=0.911;AN=56;BaseQRankSum=-6.800;DP=575;FS=9.403;HRun=7;HaplotypeScore=64.4821;InbreedingCoeff=0.7492;MQ=57.25;MQ0=20;MQRankSum=0.467;QD=27.74;ReadPosRankSum=0.380;VQSLOD=3.6060;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,35:42:53.02:1264,53,0	1/1:1,11:13:32.60:501,33,0	0/0:18,0:8:5.66:0,6,51	0/1:20,0:6:7.52:8,0,75	1/1:5,20:24:54.06:757,54,0	1/1:2,19:22:39.13:640,39,0	1/1:4,10:13:21.03:315,21,0	1/1:5,27:30:72.19:1067,72,0	1/1:3,10:14:20.86:334,21,0	1/1:10,11:20:30.10:483,30,0	1/1:9,27:35:66.08:926,66,0	1/1:6,16:23:30.18:634,30,0	1/1:8,15:23:45.15:704,45,0	1/1:1,14:15:21.03:315,21,0	0/0:16,0:16:39.11:0,39,452	1/1:2,19:21:42.14:689,42,0	1/1:6,24:28:51.17:837,51,0	1/1:1,7:8:18.06:295,18,0	1/1:6,12:18:39.13:624,39,0	1/1:6,28:33:72.09:1034,72,0	1/1:0,6:7:18.06:295,18,0	1/1:0,17:17:45.11:694,45,0	1/1:5,10:16:18.53:296,19,0	1/1:3,13:16:24.55:395,25,0	1/1:4,14:18:24.08:394,24,0	1/1:6,10:16:27.09:441,27,0	1/1:4,18:22:36.12:590,36,0	1/1:0,12:12:27.09:443,27,0
chr10	27775488	.	CAAACA	C	27750.21	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=7.703;DP=745;FS=0.860;HRun=0;HaplotypeScore=152.2177;InbreedingCoeff=0.9965;MQ=61.66;MQ0=0;MQRankSum=-7.674;QD=42.63;ReadPosRankSum=4.067;VQSLOD=5.0926;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,35:35:69.10:1345,69,0	1/1:1,9:10:18.06:381,18,0	0/0:23,0:25:53.28:0,53,1555	0/0:20,0:20:57.14:0,57,1216	1/1:0,28:28:74.95:1126,75,0	1/1:0,22:22:48.08:933,48,0	1/1:1,22:23:42.10:813,42,0	1/1:2,23:24:63.10:900,63,0	1/1:0,25:25:54.09:1026,54,0	1/1:0,23:23:66.21:1282,66,0	1/1:0,28:28:78.12:1185,78,0	1/1:0,27:27:63.12:1218,63,0	1/1:2,38:40:93.24:1856,93,0	1/1:3,37:41:67.16:1839,67,0	0/0:49,0:49:99:0,141,4094	1/1:1,29:30:81.24:1680,81,0	1/1:1,26:27:57.15:1169,57,0	1/1:1,11:12:27.09:574,27,0	1/1:1,14:15:39.08:579,39,0	1/1:0,21:21:54:797,54,0	1/1:0,24:24:45.14:888,45,0	1/1:1,22:23:56.98:827,57,0	1/1:0,21:21:38.89:715,39,0	1/1:3,39:42:66.36:1318,66,0	1/1:0,30:30:66.05:1193,66,0	1/1:1,26:27:78.23:1501,78,0	1/1:0,42:42:99:1968,102,0	1/1:0,10:10:30.10:638,30,0
chr10	27775973	.	A	AG	21440.57	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-10.181;DP=759;FS=8.121;HRun=6;HaplotypeScore=69.0193;InbreedingCoeff=0.9764;MQ=69.30;MQ0=1;MQRankSum=-4.818;QD=30.89;ReadPosRankSum=3.947;VQSLOD=5.3232;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,45:50:99:1547,123,0	1/1:1,10:11:27.09:336,27,0	0/0:19,0:19:35.98:0,36,346	0/0:15,0:14:35.97:0,36,337	1/1:0,28:28:84.07:994,84,0	1/1:4,22:26:60.19:755,60,0	1/1:3,22:25:63.20:793,63,0	1/1:3,32:35:90.17:1044,90,0	1/1:2,27:29:75.24:943,75,0	1/1:4,33:37:99:1207,99,0	1/1:2,23:25:63.20:792,63,0	1/1:1,30:31:75.24:944,75,0	1/1:4,28:32:78.08:981,78,0	1/1:5,25:30:66.21:830,66,0	0/0:31,0:31:90.20:0,90,918	1/1:2,39:41:99:1316,105,0	1/1:4,29:33:81.26:1019,81,0	1/1:1,7:8:18.06:226,18,0	1/1:6,21:27:63.18:765,63,0	1/1:4,21:25:63.20:783,63,0	1/1:5,34:39:99:1245,99,0	1/1:2,21:23:57.10:696,57,0	1/1:4,21:25:60.11:734,60,0	1/1:4,17:21:48.15:604,48,0	1/1:1,22:23:54.17:679,54,0	1/1:5,28:33:81.23:991,81,0	1/1:2,31:33:89.44:1102,89,0	1/1:1,3:4:9.03:113,9,0
chr10	27778018	.	TTTG	T	1025.61	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-6.556;DP=649;FS=2.524;HRun=0;HaplotypeScore=167.0559;InbreedingCoeff=0.9917;MQ=74.15;MQ0=0;MQRankSum=-1.210;QD=34.19;ReadPosRankSum=1.014;VQSLOD=4.3652;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:60.29:0,60,278	0/0:14,0:14:36.37:0,36,170	0/0:27,0:27:46.48:0,46,962	0/0:12,0:12:29.65:0,30,473	0/0:28,0:28:67.33:0,67,306	0/0:23,0:23:57.56:0,58,265	0/0:16,0:16:40.42:0,40,186	0/0:29,0:28:60.59:0,61,260	0/0:28,0:28:69.99:0,70,326	0/0:26,0:26:63.02:0,63,284	0/0:15,0:15:41.97:0,42,196	0/0:30,0:30:69.95:0,70,320	0/0:26,0:26:69.95:0,70,326	0/0:29,0:29:69.64:0,70,321	1/1:2,28:30:72.23:1120,72,0	0/0:26,0:26:61.25:0,61,281	0/0:20,0:20:46.43:0,46,229	0/0:16,0:16:30.78:0,31,138	0/0:15,0:15:21.61:0,22,84	0/0:36,0:36:89.96:0,90,405	0/0:15,0:15:30.78:0,31,144	0/0:14,0:14:37.66:0,38,174	0/0:10,0:10:22.38:0,22,104	0/0:20,0:20:37.62:0,38,173	0/0:23,0:23:58.40:0,58,267	0/0:40,0:40:98.51:0,99,445	0/0:36,0:36:85.44:0,85,394	0/0:21,0:21:58.70:0,59,273
chr10	27778023	.	TG	T	22558.20	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=1.423;DP=651;FS=1.468;HRun=1;HaplotypeScore=68.1063;InbreedingCoeff=0.9885;MQ=70.60;MQ0=1;MQRankSum=-7.072;QD=36.68;ReadPosRankSum=5.766;VQSLOD=4.9589;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,25:26:39.21:948,39,0	1/1:0,14:14:39.13:545,39,0	0/0:24,0:24:41.45:0,41,828	0/0:10,1:11:14.16:0,14,375	1/1:0,28:28:78.22:1065,78,0	1/1:0,23:23:63.21:880,63,0	1/1:0,19:19:44.95:629,45,0	1/1:0,33:33:99:1341,99,0	1/1:0,28:28:75.25:1047,75,0	1/1:0,25:25:75.24:1032,75,0	1/1:0,17:17:48.12:649,48,0	1/1:0,29:29:78.26:1091,78,0	1/1:0,27:27:75.25:1049,75,0	1/1:0,29:29:78.26:1090,78,0	1/1:29,0:29:45:138,45,0	1/1:0,25:25:69.23:965,69,0	1/1:0,20:20:57.19:796,57,0	1/1:0,15:15:36.12:501,36,0	1/1:0,15:15:45.10:561,45,0	1/1:0,36:36:99:1465,108,0	1/1:0,13:13:33.11:461,33,0	1/1:0,14:14:42.14:586,42,0	1/1:1,10:11:23.95:327,24,0	1/1:0,17:17:45.15:629,45,0	1/1:0,23:23:66.22:923,66,0	1/1:0,41:41:99:1659,120,0	1/1:0,37:37:93.31:1300,93,0	1/1:0,21:21:63.21:880,63,0
chr10	27780779	.	GC	G	19820.64	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=1.570;DP=544;FS=10.240;HRun=1;HaplotypeScore=52.8214;InbreedingCoeff=0.9943;MQ=86.64;MQ0=0;MQRankSum=-10.387;QD=39.48;ReadPosRankSum=6.229;VQSLOD=4.3187;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,27:27:78.26:1090,78,0	1/1:0,9:9:24.08:335,24,0	0/0:21,0:21:60.20:0,60,943	0/0:21,0:21:57.19:0,57,895	1/1:1,22:23:69.23:959,69,0	1/1:0,24:24:63.21:881,63,0	1/1:0,14:14:33.11:461,33,0	1/1:0,33:33:93.31:1300,93,0	1/1:0,15:15:45.15:626,45,0	1/1:0,23:23:66.22:923,66,0	1/1:0,26:26:78.26:1091,78,0	1/1:0,19:19:54.18:755,54,0	1/1:0,23:23:63.21:880,63,0	1/1:0,16:16:45.15:629,45,0	1/1:0,21:21:57.19:797,57,0	1/1:0,29:29:81.27:1133,81,0	1/1:0,20:20:57.19:797,57,0	1/1:0,15:15:39.13:543,39,0	1/1:0,19:19:57.19:797,57,0	1/1:0,19:19:57.19:792,57,0	1/1:0,9:9:24.08:336,24,0	1/1:0,7:7:21.07:291,21,0	1/1:0,10:10:30.10:419,30,0	1/1:0,16:16:42.14:587,42,0	1/1:0,22:22:66.22:923,66,0	1/1:0,25:25:75.25:1049,75,0	1/1:0,30:30:78.26:1090,78,0	1/1:0,8:8:24.08:336,24,0
chr10	27786209	.	CGTGTGTGTGT	C	3228.29	PASS	AB=0.817;AC=42;AF=0.808;AN=52;BaseQRankSum=2.912;DP=565;FS=0.000;HRun=0;HaplotypeScore=159.5223;InbreedingCoeff=0.2255;MQ=60.52;MQ0=16;MQRankSum=0.025;QD=7.30;ReadPosRankSum=2.677;VQSLOD=2.1099;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:24,9:32:6.02:152,6,0	1/1:2,3:5:3.01:88,3,0	0/0:27,0:17:0.47:0,0,1	./.	1/1:23,0:23:0.88:2,1,0	./.	1/1:11,5:16:5.16:114,5,0	0/0:24,0:23:2.70:0,3,8	1/1:19,1:18:7.26:165,7,0	0/0:15,0:14:2.84:0,3,14	1/1:13,0:15:3.89:72,4,0	0/1:15,0:17:14.95:50,0,15	1/1:9,5:16:10.55:311,11,0	1/1:22,5:28:12.04:282,12,0	1/1:11,4:16:6.02:158,6,0	1/1:10,0:16:12.04:294,12,0	1/1:28,2:30:0.09:261,0,0	0/1:16,4:19:29.07:82,0,29	0/0:16,0:15:1.33:0,1,20	1/1:18,7:25:5.91:105,6,0	1/1:32,0:30:2.84:30,3,0	1/1:14,4:17:9.03:235,9,0	1/1:12,1:13:10.61:167,11,0	1/1:21,5:23:6.01:175,6,0	1/1:18,0:18:9.02:111,9,0	1/1:22,4:25:10.63:170,11,0	1/1:16,0:19:15.47:222,15,0	1/1:4,1:4:5.89:104,6,0
chr10	27787185	.	A	AGTGT	1195.64	PASS	AB=0.903;AC=34;AF=0.680;AN=50;BaseQRankSum=-1.942;DP=628;FS=20.329;HRun=0;HaplotypeScore=116.3763;InbreedingCoeff=-0.3048;MQ=67.37;MQ0=18;MQRankSum=0.361;QD=2.19;ReadPosRankSum=2.454;VQSLOD=0.9525;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:30:13.92:14,0,36	0/0:7,0:11:8.04:0,8,62	./.	./.	0/1:22,0:22:23.13:75,0,23	0/1:19,0:19:6.42:6,0,41	1/1:23,5:27:3.80:71,4,0	1/1:25,0:24:1.82:5,2,0	0/1:20,0:19:43.39:78,0,43	0/1:24,0:23:8.97:166,0,9	./.	0/1:20,0:25:6.41:6,0,40	1/1:12,0:12:2.69:14,3,0	1/1:26,0:26:9.74:98,10,0	1/1:14,7:23:3.01:70,3,0	0/1:17,0:27:3.64:4,0,43	0/1:28,0:29:1.99:114,0,2	1/1:16,0:21:5.55:31,6,0	1/1:14,0:13:2.90:16,3,0	0/1:10,0:14:5.22:72,0,5	1/1:21,0:25:2.74:13,3,0	0/1:28,0:26:22.83:23,0,77	1/1:18,1:26:5.75:82,6,0	0/1:25,0:23:31.94:32,0,63	0/1:25,0:25:10.24:199,0,10	0/1:11,0:16:27.09:94,0,27	0/1:20,0:28:28.74:36,0,29	1/1:5,0:4:2.74:12,3,0
chr10	27790456	.	G	GA	26308.95	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-9.847;DP=760;FS=2.662;HRun=3;HaplotypeScore=61.9790;InbreedingCoeff=0.9995;MQ=83.85;MQ0=0;MQRankSum=-11.333;QD=37.26;ReadPosRankSum=6.378;VQSLOD=4.7661;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,28:29:75.25:1050,75,0	1/1:2,11:13:33.07:439,33,0	0/0:24,0:24:57.12:0,57,644	0/0:30,0:30:55.88:0,56,934	1/1:2,27:29:78.26:1092,78,0	1/1:0,28:28:78.26:1092,78,0	1/1:2,28:30:72.24:1009,72,0	1/1:3,35:38:99:1452,105,0	1/1:2,23:25:69.23:965,69,0	1/1:2,27:29:81.25:1113,81,0	1/1:1,37:38:99:1512,108,0	1/1:5,28:33:81.27:1127,81,0	1/1:0,35:35:93.31:1301,93,0	1/1:2,25:27:72.24:1008,72,0	1/1:1,38:39:99:1513,108,0	1/1:1,28:29:78.26:1093,78,0	1/1:2,21:23:57.16:778,57,0	1/1:1,12:13:33.11:459,33,0	1/1:4,11:15:33.10:445,33,0	1/1:0,35:35:99:1470,105,0	1/1:2,22:24:60.20:840,60,0	1/1:4,25:29:75.25:1050,75,0	1/1:1,24:25:66.22:921,66,0	1/1:0,17:17:48.16:672,48,0	1/1:2,33:35:99:1386,99,0	1/1:4,24:28:72.24:1007,72,0	1/1:1,28:28:75.25:1050,75,0	1/1:0,11:11:33.11:462,33,0
chr10	27793454	.	TAGATAGATAGATAG	T	11130.29	PASS	AB=0.967;AC=41;AF=0.759;AN=54;BaseQRankSum=-1.147;DP=457;FS=0.000;HRun=0;HaplotypeScore=257.6385;InbreedingCoeff=0.4497;MQ=33.11;MQ0=16;MQRankSum=-2.344;QD=27.48;ReadPosRankSum=3.014;VQSLOD=2.9642;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:17,0:18:2.87:3,0,92	0/0:8,0:8:9.03:0,9,184	0/0:11,0:5:15.05:0,15,226	0/0:5,0:4:12.04:0,12,180	1/1:15,3:18:17.99:560,18,0	1/1:22,4:26:16.59:455,17,0	1/1:10,0:7:6.02:87,6,0	1/1:26,0:15:45.02:571,45,0	1/1:16,7:23:38.87:1030,39,0	1/1:17,4:17:39.13:898,39,0	./.	1/1:14,5:19:15.05:554,15,0	1/1:20,0:20:24.02:261,24,0	1/1:22,0:22:30.06:338,30,0	1/1:13,5:18:15.05:637,15,0	0/1:20,1:21:16.19:354,0,16	0/1:13,1:13:43.09:79,0,43	0/1:7,0:6:52.14:195,0,52	1/1:9,1:9:24.05:481,24,0	1/1:17,3:19:12.98:260,13,0	1/1:10,0:9:0.07:1,0,0	1/1:12,6:18:30.10:1156,30,0	0/0:16,0:16:15.05:0,15,323	1/1:13,0:13:3.47:28,3,0	1/1:20,4:24:21.05:708,21,0	1/1:15,4:18:42.14:949,42,0	1/1:13,9:22:48.14:1481,48,0	0/1:6,0:6:42.38:42,0,97
chr10	27793458	.	TAGATAGATAG	T	10069.72	PASS	AB=1.000;AC=41;AF=0.759;AN=54;BaseQRankSum=0.006;DP=437;FS=0.896;HRun=0;HaplotypeScore=231.5274;InbreedingCoeff=0.4249;MQ=31.97;MQ0=17;MQRankSum=-3.084;QD=26.09;ReadPosRankSum=2.577;VQSLOD=3.6784;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:17,0:17:0.49:0,0,46	0/0:8,0:8:4.98:0,5,23	0/0:13,0:6:18.06:0,18,272	0/0:5,0:4:12.04:0,12,180	1/1:17,0:17:14.98:355,15,0	0/1:22,0:22:8.16:275,0,8	1/1:11,0:8:6.02:87,6,0	1/1:29,0:18:54.05:703,54,0	1/1:21,0:21:38.87:759,39,0	1/1:19,0:15:45.10:780,45,0	./.	1/1:18,0:18:15.05:373,15,0	1/1:13,7:20:27.09:719,27,0	1/1:13,6:19:30.10:819,30,0	1/1:20,0:20:15.05:411,15,0	1/1:12,9:21:30.09:702,30,0	0/1:11,0:10:14.87:80,0,15	0/1:7,0:6:21.40:195,0,21	1/1:12,0:10:30.07:478,30,0	1/1:18,0:17:12.51:214,13,0	1/1:8,0:7:0.18:1,0,0	1/1:16,1:17:30.10:769,30,0	0/0:16,0:16:2.94:0,3,56	1/1:11,1:13:3.48:96,3,0	1/1:23,0:23:18.06:432,18,0	1/1:17,0:15:42.14:768,42,0	1/1:20,0:20:45.15:1005,45,0	0/1:6,0:6:45.82:46,0,54
chr10	27793466	.	TAG	T	6752.85	PASS	AB=0.677;AC=47;AF=0.870;AN=54;BaseQRankSum=2.735;DP=470;FS=0.810;HRun=0;HaplotypeScore=220.2725;InbreedingCoeff=0.5086;MQ=39.22;MQ0=15;MQRankSum=-4.108;QD=15.63;ReadPosRankSum=2.265;VQSLOD=4.8824;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,8:15:2.98:22,3,0	1/1:2,5:8:8.97:84,9,0	0/0:19,0:11:32.70:0,33,464	0/0:8,0:8:23.82:0,24,330	1/1:4,12:16:14.81:129,15,0	0/1:7,17:24:6.17:147,0,6	1/1:3,8:8:6.02:87,6,0	1/1:16,20:25:51.12:885,51,0	1/1:8,15:23:41.73:448,42,0	1/1:8,15:20:59.70:705,60,0	./.	1/1:5,16:21:21.03:237,21,0	1/1:7,12:19:29.95:325,30,0	1/1:7,12:19:33.04:357,33,0	1/1:6,18:24:27:250,27,0	1/1:11,8:19:27.05:307,27,0	1/1:5,5:9:7.12:94,7,0	1/1:3,4:6:10.81:207,11,0	1/1:4,7:10:30.07:399,30,0	1/1:4,14:17:11.87:157,12,0	1/1:5,5:9:5.98:66,6,0	1/1:10,8:18:27.02:271,27,0	1/1:4,13:17:12.01:120,12,0	0/1:5,6:11:0:1,0,0	1/1:5,19:24:14.93:123,15,0	1/1:8,13:19:54.12:676,54,0	1/1:11,12:23:54.08:610,54,0	0/1:3,1:4:8.84:46,0,9
chr10	27793468	.	G	GAT	4844.58	PASS	AB=0.968;AC=42;AF=0.778;AN=54;BaseQRankSum=-9.092;DP=477;FS=0.000;HRun=0;HaplotypeScore=233.8460;InbreedingCoeff=0.2837;MQ=39.80;MQ0=12;MQRankSum=-1.117;QD=11.67;ReadPosRankSum=-0.818;VQSLOD=4.1899;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,1:16:2.98:22,3,0	0/1:8,0:8:23.52:35,0,24	0/0:18,0:11:31.35:0,31,457	0/0:9,0:8:23.82:0,24,329	0/1:16,0:16:16.68:34,0,17	0/1:23,1:24:17.53:74,0,18	1/1:10,1:8:6.02:87,6,0	1/1:31,2:25:51.12:885,51,0	1/1:23,0:23:11.88:280,12,0	1/1:22,0:20:38.89:593,39,0	./.	1/1:21,0:21:5.63:125,6,0	1/1:19,0:19:0.15:158,0,0	1/1:19,0:19:10.31:190,10,0	1/1:24,0:24:7.70:110,8,0	1/1:20,0:20:10.75:192,11,0	1/1:9,1:9:8.94:97,9,0	1/1:6,1:6:15.52:214,16,0	1/1:11,1:11:26.08:371,26,0	1/1:19,0:18:8.24:129,8,0	1/1:6,4:9:5.96:66,6,0	0/1:19,0:19:0.31:76,0,0	0/1:17,0:17:16.41:35,0,16	0/1:9,2:11:0.10:0,0,0	0/0:24,0:24:5.39:0,5,17	1/1:20,1:19:39.17:564,39,0	1/1:26,0:26:28.35:430,28,0	1/1:7,0:7:8.66:75,9,0
chr10	27793495	.	A	AT	16168.46	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=3.700;DP=510;FS=1.430;HRun=4;HaplotypeScore=167.0229;InbreedingCoeff=0.9451;MQ=70.87;MQ0=2;MQRankSum=-9.271;QD=34.26;ReadPosRankSum=3.611;VQSLOD=3.1904;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,18:19:51.12:665,51,0	1/1:0,8:8:24.08:328,24,0	0/0:20,0:19:42.04:0,42,539	0/0:18,0:18:48.10:0,48,527	1/1:0,19:19:51.17:683,51,0	1/1:2,28:30:81.27:1106,81,0	1/1:3,9:11:24.04:306,24,0	1/1:5,34:37:99:1334,99,0	1/1:3,16:19:51.17:689,51,0	1/1:3,19:22:60.17:774,60,0	1/1:1,14:15:39.04:499,39,0	1/1:5,15:20:54.17:718,54,0	1/1:4,21:25:60.13:781,60,0	1/1:0,15:15:45.15:608,45,0	1/1:3,26:29:78.26:1052,78,0	1/1:3,12:15:36.12:491,36,0	1/1:2,6:8:15:198,15,0	1/1:2,5:7:15.05:205,15,0	1/1:1,12:12:36.11:475,36,0	1/1:2,25:27:72.24:983,72,0	1/1:0,7:7:8.99:102,9,0	1/1:3,15:18:42.13:557,42,0	1/1:2,18:20:45.14:605,45,0	1/1:0,10:10:26.84:322,27,0	1/1:1,22:23:66.22:888,66,0	1/1:1,20:21:57.19:778,57,0	1/1:3,21:24:60.20:819,60,0	1/1:1,5:6:15.05:205,15,0
chr10	27793811	.	T	TC	19697.68	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=5.891;DP=671;FS=5.776;HRun=0;HaplotypeScore=177.3282;InbreedingCoeff=0.9821;MQ=82.37;MQ0=0;MQRankSum=-9.979;QD=31.42;ReadPosRankSum=6.043;VQSLOD=4.0304;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,13:13:39.12:468,39,0	1/1:0,7:7:21.06:252,21,0	0/0:25,0:25:69.14:0,69,859	0/0:19,0:19:51.11:0,51,646	1/1:1,30:31:87.09:948,87,0	1/1:1,30:31:93.16:1050,93,0	1/1:2,17:19:54.67:571,55,0	1/1:4,21:25:73.26:769,73,0	1/1:2,24:26:76.72:853,77,0	1/1:3,24:27:80.71:980,81,0	1/1:1,17:18:53.94:538,54,0	1/1:2,24:26:78.14:879,78,0	1/1:6,33:40:99:1257,117,0	1/1:5,35:40:99:1188,115,0	1/1:3,24:27:79.57:827,80,0	1/1:2,29:31:92.49:1014,92,0	1/1:2,14:16:45.08:500,45,0	1/1:0,15:15:45.05:449,45,0	1/1:3,15:18:49.06:574,49,0	1/1:2,18:23:49.29:566,49,0	1/1:2,22:24:66.61:760,67,0	1/1:6,19:25:72.10:782,72,0	1/1:1,21:22:62.90:604,63,0	1/1:3,13:16:39.05:429,39,0	1/1:4,21:25:73.62:763,74,0	1/1:0,26:30:77.21:990,77,0	1/1:6,42:48:99:1582,144,0	1/1:2,2:4:11.99:109,12,0
chr10	27793812	.	TGC	T	20065	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=6.012;DP=667;FS=5.726;HRun=0;HaplotypeScore=189.1307;InbreedingCoeff=0.9464;MQ=82.48;MQ0=0;MQRankSum=-10.850;QD=32.21;ReadPosRankSum=6.241;VQSLOD=5.5204;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,13:13:39.12:481,39,0	1/1:0,7:7:21.07:259,21,0	0/0:26,0:26:75.23:0,75,1380	0/0:18,0:18:51.17:0,51,983	1/1:1,30:31:90.06:996,90,0	1/1:1,30:31:93.20:1082,93,0	1/1:2,17:20:60.02:645,60,0	1/1:4,21:25:74.03:797,74,0	1/1:2,24:26:78.18:899,78,0	1/1:3,24:27:80.88:988,81,0	1/1:1,17:18:53.99:558,54,0	1/1:1,24:25:75.17:881,75,0	1/1:6,33:39:99:1200,113,0	1/1:6,35:41:99:1227,121,0	1/1:4,24:28:83.25:880,83,0	1/1:3,29:32:95.98:1046,96,0	1/1:2,14:16:44.83:494,45,0	1/1:0,15:15:45.07:466,45,0	1/1:2,15:17:51.05:582,51,0	1/1:4,19:23:57.06:599,57,0	1/1:2,22:24:70.60:778,71,0	1/1:6,19:25:75.10:827,75,0	1/1:1,21:22:62.70:608,63,0	1/1:2,13:15:36.07:417,36,0	1/1:4,21:25:74.06:771,74,0	1/1:4,26:30:84.36:964,84,0	1/1:4,42:46:99:1556,138,0	1/1:0,2:2:6.01:64,6,0
chr10	27794526	.	C	CT	21058.43	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=1.115;DP=559;FS=11.860;HRun=0;HaplotypeScore=94.6872;InbreedingCoeff=0.9700;MQ=77.95;MQ0=0;MQRankSum=-8.604;QD=39.58;ReadPosRankSum=4.950;VQSLOD=4.2739;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,20:20:54.18:764,54,0	1/1:0,8:8:24.08:343,24,0	0/0:13,0:13:39.13:0,39,533	0/0:14,0:14:37.62:0,38,483	1/1:1,31:32:90.26:1265,90,0	1/1:1,28:29:79.51:1104,80,0	1/1:0,13:13:33.11:468,33,0	1/1:1,39:40:99:1578,118,0	1/1:0,15:15:42.14:590,42,0	1/1:0,27:27:81.26:1146,81,0	1/1:0,38:38:99:1609,114,0	1/1:0,23:23:63.21:894,63,0	1/1:1,26:27:66.22:937,66,0	1/1:0,18:18:54.18:771,54,0	1/1:0,27:27:72.24:1028,72,0	1/1:0,12:12:36.12:512,36,0	1/1:0,24:24:60.20:851,60,0	1/1:0,5:5:15.05:217,15,0	1/1:0,14:14:42.11:582,42,0	1/1:0,28:28:84.11:1124,84,0	1/1:1,6:7:18.06:257,18,0	1/1:0,10:10:30.10:427,30,0	1/1:0,26:26:72.24:1022,72,0	1/1:0,4:4:12.04:173,12,0	1/1:0,22:22:66.22:935,66,0	1/1:2,19:21:60.18:848,60,0	1/1:0,34:34:90.30:1268,90,0	1/1:0,8:8:24.08:345,24,0
chr10	27795759	.	GT	G	15298.70	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-5.861;DP=636;FS=23.301;HRun=8;HaplotypeScore=65.9555;InbreedingCoeff=0.9806;MQ=79.10;MQ0=0;MQRankSum=-8.029;QD=25.46;ReadPosRankSum=5.333;VQSLOD=3.3974;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,12:12:27.04:261,27,0	1/1:1,6:7:15.02:145,15,0	0/0:15,0:16:34.85:0,35,373	0/0:19,0:19:14.99:0,15,404	1/1:7,21:28:63.10:608,63,0	1/1:0,22:22:60.10:579,60,0	1/1:1,11:12:33.05:319,33,0	1/1:3,30:33:90.13:864,90,0	1/1:2,22:24:57.09:550,57,0	1/1:1,31:32:90.14:869,90,0	1/1:0,29:29:81.13:782,81,0	1/1:3,26:29:56.95:677,57,0	1/1:3,25:28:72.11:695,72,0	1/1:2,29:31:84.13:811,84,0	1/1:3,19:22:57.09:550,57,0	1/1:3,24:27:69.11:666,69,0	1/1:3,19:22:57.97:552,58,0	1/1:2,15:17:36.05:347,36,0	1/1:2,15:17:45.07:434,45,0	1/1:2,40:42:99:1159,120,0	1/1:2,8:10:24.04:232,24,0	1/1:3,22:25:63.10:608,63,0	1/1:1,19:20:57.09:550,57,0	1/1:1,22:23:60.10:579,60,0	1/1:1,22:23:66.11:637,66,0	1/1:1,30:31:90.13:864,90,0	1/1:2,25:27:75.12:724,75,0	1/1:0,8:8:24.04:232,24,0
chr10	27797142	.	CACACAG	C	10186.45	PASS	AC=50;AF=1.000;AN=50;DP=784;FS=0.000;HRun=0;HaplotypeScore=202.3634;InbreedingCoeff=-0.0091;MQ=54.04;MQ0=11;QD=14.98;VQSLOD=3.8565;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:31,9:38:42.18:405,42,0	1/1:7,3:10:17.98:251,18,0	./.	./.	1/1:22,0:22:15.03:223,15,0	1/1:24,6:30:26.96:403,27,0	1/1:20,2:22:29.97:486,30,0	1/1:39,0:38:8.99:76,9,0	1/1:18,4:22:24.04:418,24,0	1/1:16,2:18:27.02:363,27,0	1/1:10,2:12:14.97:223,15,0	1/1:20,9:30:41.95:617,42,0	1/1:29,5:34:53.89:911,54,0	1/1:33,10:42:56.93:912,57,0	1/1:24,8:32:53.86:650,54,0	1/1:20,7:27:35.61:456,36,0	1/1:16,4:19:17.96:280,18,0	1/1:23,2:24:20.85:224,21,0	1/1:24,2:26:15.05:297,15,0	1/1:18,6:24:35.84:466,36,0	1/1:45,0:41:24.26:345,24,0	1/1:18,4:23:23.86:277,24,0	1/1:19,1:19:6.49:105,6,0	1/1:29,10:39:21.93:329,22,0	1/1:21,9:29:35.82:402,36,0	1/1:23,0:23:30.02:502,30,0	1/1:16,7:23:44.68:566,45,0	./.
chr10	27797180	.	C	CAA	6917.32	PASS	AB=0.904;AC=35;AF=0.625;AN=56;BaseQRankSum=-5.703;DP=803;FS=76.203;HRun=1;HaplotypeScore=201.5038;InbreedingCoeff=-0.1791;MQ=49.78;MQ0=25;MQRankSum=2.619;QD=9.81;ReadPosRankSum=-6.766;VQSLOD=-0.1483;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:38,5:41:43.89:375,44,0	0/1:6,1:7:40.89:179,0,41	0/0:44,0:11:19.84:0,20,301	0/0:48,0:14:29.49:0,29,340	1/1:27,1:28:17.36:223,17,0	1/1:29,2:30:11.63:250,12,0	1/1:23,9:32:4.39:380,4,0	0/1:31,0:24:37.07:37,0,466	1/1:17,2:19:5.05:277,5,0	0/1:21,0:21:99:169,0,359	0/1:21,2:23:28.49:141,0,28	0/1:27,4:31:12.81:409,0,13	0/1:24,7:30:15.29:662,0,15	0/1:31,6:36:63.23:477,0,63	0/1:31,5:36:3.89:487,0,4	0/1:24,2:26:31.49:250,0,31	0/1:18,3:20:99:139,0,123	0/1:25,1:25:99:142,0,147	0/1:20,2:21:99:125,0,373	1/1:25,2:26:21.42:377,21,0	0/1:37,9:42:99:275,0,543	1/1:18,2:20:23.86:268,24,0	1/1:19,0:18:5.88:105,6,0	1/1:35,3:37:16.98:236,17,0	1/1:32,1:33:8.02:255,8,0	0/1:21,5:26:99:373,0,389	0/1:30,1:31:99:306,0,184	0/0:6,0:6:15.05:0,15,211
chr10	27797204	.	GACAGACAC	G	13210.08	PASS	AB=0.583;AC=51;AF=0.911;AN=56;BaseQRankSum=2.018;DP=782;FS=2.509;HRun=0;HaplotypeScore=191.0072;InbreedingCoeff=0.7242;MQ=54.33;MQ0=20;MQRankSum=-0.616;QD=18.90;ReadPosRankSum=4.670;VQSLOD=3.6365;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,28:40:9.39:101,9,0	1/1:5,1:6:12.03:245,12,0	0/0:43,0:18:34.59:0,35,461	0/0:40,0:17:41.71:0,42,518	1/1:0,27:28:60.19:779,60,0	1/1:8,23:32:38.30:513,38,0	1/1:2,28:30:15:213,15,0	1/1:6,21:21:56.88:656,57,0	1/1:3,21:24:15.05:317,15,0	1/1:3,22:25:68.83:1146,69,0	1/1:5,21:26:48.14:619,48,0	1/1:6,26:32:18.06:362,18,0	1/1:5,24:29:35.26:558,35,0	1/1:6,27:33:41.02:689,41,0	1/1:10,27:37:24.01:359,24,0	1/1:5,28:33:18.04:351,18,0	1/1:4,17:22:15.02:328,15,0	0/1:6,15:21:5.23:335,0,5	1/1:5,14:17:45.01:777,45,0	1/1:3,21:24:41.98:566,42,0	1/1:40,0:36:53.82:1251,54,0	1/1:6,17:22:30.03:348,30,0	1/1:0,19:19:12.42:150,12,0	1/1:11,22:31:6.96:122,7,0	1/1:8,25:33:17.89:316,18,0	1/1:1,20:21:48.04:981,48,0	1/1:5,28:34:27.77:710,28,0	1/1:6,0:6:15.05:420,15,0
chr10	27798995	.	G	GT	16156.27	PASS	AB=1.000;AC=49;AF=0.942;AN=52;BaseQRankSum=-2.828;DP=664;FS=19.616;HRun=6;HaplotypeScore=169.2995;InbreedingCoeff=0.5025;MQ=65.67;MQ0=5;MQRankSum=-4.249;QD=26.27;ReadPosRankSum=8.139;VQSLOD=2.4596;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:10,20:30:58.92:730,59,0	1/1:2,8:10:3.23:277,3,0	0/0:44,0:28:42.74:0,43,433	0/1:29,0:21:38.67:39,0,240	1/1:15,24:39:38.15:922,38,0	1/1:6,17:23:63.16:773,63,0	1/1:6,13:19:41.93:516,42,0	1/1:11,15:24:30.69:614,31,0	1/1:5,18:23:60.15:734,60,0	1/1:9,26:35:40.16:1003,40,0	1/1:4,13:17:39.12:486,39,0	1/1:4,10:14:36.05:432,36,0	1/1:11,24:35:87.13:1028,87,0	1/1:4,23:27:55.81:726,56,0	1/1:8,19:27:49.63:775,50,0	1/1:3,18:21:56.98:697,57,0	1/1:12,11:23:44.87:526,45,0	./.	1/1:12,13:23:50.99:611,51,0	1/1:8,27:35:92.70:1129,93,0	1/1:8,5:13:24.06:287,24,0	1/1:3,16:19:32.36:545,32,0	1/1:11,21:32:74.77:905,75,0	1/1:5,10:15:1.97:256,2,0	1/1:11,18:29:59.46:745,59,0	1/1:6,16:22:45.50:699,46,0	1/1:15,12:26:56.35:700,56,0	./.
chr10	27799011	.	T	TTTTTG	25945.44	PASS	AC=48;AF=0.923;AN=52;BaseQRankSum=2.851;DP=657;FS=3.160;HRun=0;HaplotypeScore=163.0936;InbreedingCoeff=0.9903;MQ=55.21;MQ0=5;MQRankSum=-3.423;QD=44.20;ReadPosRankSum=3.867;VQSLOD=4.8787;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:25,4:29:36.01:763,36,0	1/1:7,6:13:30.10:669,30,0	0/0:45,0:24:37.29:0,37,502	0/0:23,0:16:18.06:0,18,277	1/1:29,12:41:90.17:1734,90,0	1/1:14,9:23:36.10:872,36,0	1/1:16,4:20:30.09:585,30,0	1/1:27,0:25:57.12:715,57,0	1/1:13,10:23:45.15:1156,45,0	1/1:26,11:38:87.27:1678,87,0	1/1:10,8:18:48.15:1009,48,0	1/1:13,4:17:30.07:630,30,0	1/1:18,14:32:72.11:1666,72,0	1/1:15,11:25:57.15:1290,57,0	1/1:16,12:28:63.19:1526,63,0	1/1:9,14:23:57.18:1435,57,0	1/1:17,3:20:37.31:728,37,0	./.	1/1:20,5:23:53.94:923,54,0	1/1:21,14:35:81.24:1676,81,0	1/1:10,0:10:18.06:266,18,0	1/1:11,11:22:54.17:1303,54,0	1/1:16,16:32:75.25:1905,75,0	1/1:12,5:17:29.96:598,30,0	1/1:13,11:24:60.20:1288,60,0	1/1:16,5:21:53.95:973,54,0	1/1:21,2:22:35.92:559,36,0	./.
chr10	27802191	.	GACC	G	1060.64	PASS	AB=0.993;AC=38;AF=0.679;AN=56;BaseQRankSum=-7.034;DP=429;FS=22.305;HRun=0;HaplotypeScore=107.9231;InbreedingCoeff=-0.1213;MQ=64.13;MQ0=25;MQRankSum=-1.870;QD=4.06;ReadPosRankSum=-1.859;VQSLOD=0.3893;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:7,0:7:2.99:23,3,0	0/1:5,0:5:20.20:28,0,20	0/0:67,0:16:37.19:0,37,482	0/0:100,0:27:41.21:0,41,350	1/1:8,1:9:10.29:58,10,0	1/1:11,0:11:4.36:21,4,0	0/1:19,0:19:36.90:58,0,37	0/1:20,0:20:49.66:117,0,50	0/1:11,0:10:9.03:57,0,9	0/1:16,0:15:3.44:154,0,3	0/1:10,0:10:2.12:11,0,2	0/1:9,0:9:9.07:33,0,9	0/1:10,0:10:9.20:62,0,9	0/1:17,0:17:39.90:40,0,44	1/1:9,1:8:3:25,3,0	1/1:13,0:12:19.26:109,19,0	0/1:10,1:11:48.73:49,0,82	0/0:1,0:1:2.37:0,2,8	1/1:8,0:8:14.73:111,15,0	1/1:13,1:14:5.22:78,5,0	1/1:3,0:3:2.94:18,3,0	1/1:7,0:7:0.20:2,0,0	0/1:7,0:7:12.16:14,0,12	1/1:10,0:9:3.04:11,3,0	1/1:9,0:8:3.27:21,3,0	1/1:3,1:4:0.65:58,1,0	0/1:17,0:17:32.17:32,0,68	1/1:4,0:4:3.45:22,3,0
chr10	27802192	.	AC	A	3819.90	PASS	AB=0.763;AC=52;AF=0.929;AN=56;BaseQRankSum=-5.056;DP=426;FS=4.782;HRun=2;HaplotypeScore=92.7671;InbreedingCoeff=0.3160;MQ=64.23;MQ0=26;MQRankSum=-2.948;QD=11.72;ReadPosRankSum=3.062;VQSLOD=2.3708;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,1:8:3.01:39,3,0	1/1:3,2:5:11.90:111,12,0	0/1:65,2:15:33.49:33,0,334	0/0:97,2:26:30.15:0,30,272	1/1:2,7:9:7.57:77,8,0	1/1:6,4:11:4.21:41,4,0	1/1:7,12:19:19.20:186,19,0	1/1:2,17:19:48.62:607,49,0	1/1:2,9:10:17.98:185,18,0	1/1:2,14:15:39.12:492,39,0	1/1:3,5:10:7.50:46,7,0	1/1:1,8:9:8.94:94,9,0	1/1:2,8:10:17.94:193,18,0	1/1:9,8:17:20.87:197,21,0	0/1:2,8:8:0:0,0,0	1/1:1,12:12:21.07:267,21,0	1/1:7,4:11:24.37:231,24,0	1/1:1,0:1:2.99:24,3,0	1/1:1,7:8:21.06:263,21,0	1/1:9,5:14:13.52:123,14,0	1/1:0,3:3:3.01:37,3,0	1/1:6,1:7:0.11:2,0,0	1/1:2,5:7:5.91:55,6,0	1/1:5,5:9:3.39:18,3,0	1/1:3,4:6:6.42:55,6,0	1/1:2,1:3:8.95:84,9,0	1/1:10,7:17:32.55:283,33,0	1/1:1,3:4:6.02:78,6,0
chr10	27802193	.	C	CAGA	3993.49	PASS	AB=1.000;AC=51;AF=0.911;AN=56;BaseQRankSum=-6.114;DP=424;FS=4.925;HRun=0;HaplotypeScore=97.0688;InbreedingCoeff=0.2938;MQ=64.67;MQ0=26;MQRankSum=-2.443;QD=12.60;ReadPosRankSum=3.659;VQSLOD=3.1062;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,4:7:3.01:39,3,0	1/1:2,3:5:11.30:168,11,0	0/1:69,0:15:33.56:34,0,366	0/0:97,0:26:26.49:0,26,251	1/1:8,0:9:8.84:67,9,0	1/1:5,5:10:2.30:13,2,0	1/1:14,1:17:19.16:236,19,0	1/1:19,0:19:47.40:390,47,0	1/1:9,1:10:17.42:234,17,0	1/1:14,0:14:37.80:344,38,0	1/1:7,2:10:5.99:52,6,0	1/1:8,1:9:8.61:110,9,0	1/1:8,1:10:17.59:189,18,0	1/1:8,9:17:20.98:351,21,0	1/1:10,1:9:2.96:19,3,0	1/1:12,1:12:17.89:202,18,0	1/1:5,4:11:24.19:280,24,0	1/1:0,0:1:3:27,3,0	1/1:7,0:8:20.07:132,20,0	1/1:6,5:13:10.19:126,10,0	1/1:3,0:3:2.60:10,3,0	0/0:2,4:7:0.88:0,1,3	1/1:6,1:7:5.85:110,6,0	1/1:5,5:10:3:71,3,0	1/1:4,3:6:5.98:107,6,0	1/1:2,2:4:12.01:168,12,0	1/1:7,7:16:32.81:475,33,0	1/1:4,0:4:5.92:39,6,0
chr10	27803857	.	G	GC	28682.84	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-8.406;DP=670;FS=2.426;HRun=1;HaplotypeScore=54.4255;InbreedingCoeff=0.9950;MQ=79.73;MQ0=0;MQRankSum=-9.103;QD=44.96;ReadPosRankSum=5.389;VQSLOD=4.2177;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,17:17:48.16:767,48,0	1/1:0,13:13:39.13:624,39,0	0/0:17,0:17:48.14:0,48,651	0/0:15,0:15:38.05:0,38,472	1/1:0,36:36:99:1677,105,0	1/1:0,21:21:57.19:911,57,0	1/1:0,15:15:39.13:624,39,0	1/1:1,34:35:99:1668,105,0	1/1:1,30:31:87.30:1391,87,0	1/1:0,22:22:66.23:1054,66,0	1/1:1,31:32:81.28:1292,81,0	1/1:1,26:27:78.27:1247,78,0	1/1:0,24:24:69.24:1103,69,0	1/1:0,32:32:93.32:1487,93,0	1/1:1,30:31:90.31:1439,90,0	1/1:0,23:23:63.21:1007,63,0	1/1:0,13:13:33.11:527,33,0	1/1:0,12:12:36.12:575,36,0	1/1:2,25:27:75.26:1194,75,0	1/1:1,40:41:99:1869,117,0	1/1:1,23:24:66.23:1055,66,0	1/1:0,25:25:72.25:1151,72,0	1/1:1,20:21:60.20:959,60,0	1/1:0,10:10:27.09:432,27,0	1/1:1,32:33:84.28:1328,84,0	1/1:0,29:29:87.30:1385,87,0	1/1:1,37:38:99:1631,102,0	1/1:0,6:6:18.06:288,18,0
chr10	27804299	.	CCACACA	C	11702.83	PASS	AB=0.858;AC=51;AF=0.911;AN=56;BaseQRankSum=3.306;DP=421;FS=0.000;HRun=0;HaplotypeScore=152.6704;InbreedingCoeff=0.2766;MQ=46.91;MQ0=20;MQRankSum=-3.309;QD=30.32;ReadPosRankSum=5.883;VQSLOD=4.2871;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:17,3:18:63.23:540,0,63	1/1:7,0:7:12.04:202,12,0	0/0:35,0:12:26.47:0,26,520	0/1:42,0:24:17.96:18,0,456	1/1:17,3:20:30.09:512,30,0	1/1:17,1:15:30.10:560,30,0	1/1:17,0:15:18.06:306,18,0	0/1:5,3:8:22.51:322,0,23	1/1:9,0:9:21.07:358,21,0	1/1:9,2:10:24.08:430,24,0	1/1:8,3:11:18.06:357,18,0	1/1:8,3:10:27.09:502,27,0	1/1:17,0:14:27.09:457,27,0	1/1:23,2:23:53.85:946,54,0	1/1:5,4:8:24.08:463,24,0	1/1:13,0:11:27.07:410,27,0	1/1:10,0:10:18.06:313,18,0	1/1:1,0:1:3.01:51,3,0	1/1:8,2:8:18.02:304,18,0	1/1:13,4:16:18.06:375,18,0	1/1:5,3:8:12.04:232,12,0	1/1:11,4:15:27.52:498,28,0	1/1:11,1:9:21.06:369,21,0	1/1:10,3:11:24.08:436,24,0	1/1:17,4:20:54.18:962,54,0	1/1:21,0:20:48.16:910,48,0	1/1:15,2:17:42.14:742,42,0	1/1:0,2:2:6.02:131,6,0
chr10	27804300	.	CACACA	C	5746.96	PASS	AB=0.989;AC=39;AF=0.696;AN=56;BaseQRankSum=9.776;DP=410;FS=0.543;HRun=0;HaplotypeScore=164.0718;InbreedingCoeff=-0.1366;MQ=46.22;MQ0=20;MQRankSum=-6.761;QD=17.26;ReadPosRankSum=10.399;VQSLOD=3.2687;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:18,0:16:62.01:295,0,62	1/1:7,0:7:11.98:120,12,0	0/0:35,0:12:35.84:0,36,638	0/0:42,0:24:30.83:0,31,694	0/1:20,0:20:46.83:203,0,47	1/1:17,0:14:5.71:286,6,0	1/1:17,0:15:17.94:141,18,0	0/1:7,0:7:28.15:212,0,28	1/1:9,0:9:20.93:166,21,0	1/1:10,0:9:1.63:186,2,0	1/1:11,0:11:17.42:192,17,0	1/1:11,0:10:2.76:228,3,0	0/1:17,0:14:45.64:175,0,46	0/1:23,2:23:43.33:494,0,43	1/1:9,0:8:24:244,24,0	0/1:13,0:11:4.81:140,0,5	0/1:9,0:9:22.39:152,0,22	1/1:1,0:1:2.99:23,3,0	0/1:10,0:8:33.99:124,0,34	0/1:16,0:15:54.80:183,0,55	0/1:7,0:7:11.89:139,0,12	0/1:14,1:15:16.93:246,0,17	1/1:12,0:9:16.60:183,17,0	0/1:12,0:10:0.30:198,0,0	1/1:20,0:19:53.93:531,54,0	1/1:20,1:20:47.99:499,48,0	0/1:17,0:17:26.50:312,0,26	1/1:2,0:2:6.02:76,6,0
chr10	27804307	.	ACACACACAATCAAT	A	23774.65	PASS	AB=0.826;AC=51;AF=0.911;AN=56;BaseQRankSum=3.039;DP=415;FS=2.497;HRun=0;HaplotypeScore=168.7489;InbreedingCoeff=0.2975;MQ=41.34;MQ0=20;MQRankSum=-3.871;QD=62.56;ReadPosRankSum=7.172;VQSLOD=4.4087;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:10,8:17:63.29:1054,0,63	1/1:0,7:7:12.04:510,12,0	0/0:35,0:13:38.28:0,38,1157	0/1:37,0:21:11.93:12,0,952	1/1:7,9:16:27.88:892,28,0	1/1:8,10:15:30.10:1141,30,0	1/1:4,15:17:24.08:872,24,0	0/1:9,3:12:10.89:814,0,11	1/1:2,9:11:24.08:962,24,0	1/1:4,6:9:27.09:953,27,0	1/1:5,6:11:18.06:493,18,0	1/1:5,6:10:27.09:962,27,0	1/1:6,10:13:33.11:1276,33,0	1/1:10,12:20:54.18:2049,54,0	1/1:5,4:8:24.08:829,24,0	1/1:7,7:12:30.08:1018,30,0	1/1:10,4:14:24.08:727,24,0	1/1:0,1:1:3.01:128,3,0	1/1:6,3:7:17.96:535,18,0	1/1:10,5:14:15.15:507,15,0	1/1:9,1:10:12.04:232,12,0	1/1:10,4:14:25.14:648,25,0	1/1:6,6:9:21.06:660,21,0	1/1:7,5:10:21.12:949,21,0	1/1:8,14:21:54.19:1960,54,0	1/1:3,19:21:60.16:1877,60,0	1/1:4,11:15:42.14:1584,42,0	1/1:2,0:2:6.02:131,6,0
chr10	27804315	.	AATCAAT	A	8067.93	PASS	AB=0.940;AC=46;AF=0.821;AN=56;BaseQRankSum=9.899;DP=371;FS=50.510;HRun=0;HaplotypeScore=163.6040;InbreedingCoeff=0.1368;MQ=39.72;MQ0=14;MQRankSum=-4.032;QD=22.35;ReadPosRankSum=7.137;VQSLOD=2.1066;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:16,1:15:10.53:350,11,0	1/1:7,0:7:12.04:195,12,0	0/1:23,0:13:4.01:4,0,631	0/1:31,0:19:18.26:18,0,642	1/1:14,0:14:2.86:223,3,0	1/1:13,2:13:20.38:385,20,0	1/1:16,2:17:24.08:393,24,0	0/1:8,4:12:2.81:433,0,3	1/1:9,2:11:24.08:402,24,0	1/1:10,1:10:19.59:425,20,0	1/1:9,1:10:2.45:80,2,0	1/1:10,1:10:7.44:270,7,0	1/1:14,2:13:33.11:556,33,0	1/1:21,0:19:27.73:721,28,0	1/1:9,0:8:6.13:221,6,0	1/1:10,2:10:27.09:481,27,0	1/1:6,4:10:9.03:303,9,0	1/1:1,0:1:3.01:48,3,0	0/1:8,0:7:10.09:129,0,10	0/1:12,1:12:10.64:76,0,11	0/0:6,2:8:6.37:0,6,26	0/1:11,0:11:7.80:81,0,8	1/1:10,1:8:4.25:174,4,0	1/1:12,0:10:11.34:318,11,0	1/1:19,2:20:21.48:615,21,0	1/1:21,1:21:0.94:651,1,0	1/1:13,0:13:25.66:514,26,0	0/0:2,0:2:4.59:0,5,15
chr10	27804368	.	CA	C	7700.37	PASS	AB=0.962;AC=53;AF=0.946;AN=56;BaseQRankSum=-4.534;DP=425;FS=6.046;HRun=10;HaplotypeScore=104.9113;InbreedingCoeff=0.3328;MQ=71.66;MQ0=3;MQRankSum=-3.972;QD=19.01;ReadPosRankSum=4.147;VQSLOD=4.9668;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,13:15:29.98:260,30,0	1/1:2,4:6:12:104,12,0	0/0:20,0:11:1.16:0,1,92	0/1:24,1:16:36.54:37,0,184	1/1:4,15:19:32.97:286,33,0	1/1:2,17:19:47.98:417,48,0	1/1:5,8:13:26.98:234,27,0	1/1:9,16:25:40.42:402,40,0	1/1:2,5:7:14.99:130,15,0	1/1:3,15:18:44.99:391,45,0	1/1:1,17:18:47.99:417,48,0	1/1:2,10:12:29.99:260,30,0	1/1:2,12:14:35.99:312,36,0	1/1:2,18:20:50.98:443,51,0	1/1:1,11:12:32.99:286,33,0	1/1:2,16:18:50.98:441,51,0	1/1:2,14:16:35.97:313,36,0	1/1:0,3:3:9:78,9,0	1/1:5,13:18:38.99:339,39,0	1/1:5,23:28:65.96:572,66,0	1/1:1,7:8:11.97:104,12,0	1/1:0,6:6:14.99:130,15,0	1/1:1,19:20:47.98:417,48,0	1/1:1,12:13:32.99:286,33,0	1/1:3,21:24:50.98:443,51,0	1/1:3,11:14:35.99:312,36,0	1/1:2,10:12:26.99:234,27,0	1/1:0,2:2:6:52,6,0
chr10	27809621	.	ATT	A	9605.42	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-4.140;DP=364;FS=26.244;HRun=10;HaplotypeScore=55.1773;InbreedingCoeff=0.8529;MQ=60.62;MQ0=4;MQRankSum=-4.778;QD=27.44;ReadPosRankSum=3.529;VQSLOD=2.9663;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,10:10:24.05:267,24,0	1/1:0,8:8:24.06:267,24,0	0/0:7,0:6:8.76:0,9,212	0/0:7,0:5:15:0,15,191	1/1:4,16:20:24.82:297,25,0	1/1:2,13:15:36.08:399,36,0	1/1:1,9:10:21.05:233,21,0	1/1:4,18:22:54.10:591,54,0	1/1:0,7:7:21.06:234,21,0	1/1:2,12:14:36.09:401,36,0	1/1:2,12:14:30.07:334,30,0	1/1:2,15:16:45.12:500,45,0	1/1:1,11:12:33.08:368,33,0	1/1:0,13:13:33.09:366,33,0	1/1:3,20:21:60.16:664,60,0	1/1:0,12:12:36.10:401,36,0	1/1:1,5:6:12.03:134,12,0	1/1:0,3:3:9.02:100,9,0	1/1:2,10:12:30.07:332,30,0	1/1:3,13:16:45.12:496,45,0	1/1:0,10:10:27.06:301,27,0	1/1:0,15:15:45.12:499,45,0	1/1:2,21:23:54.13:602,54,0	1/1:1,10:11:14.97:167,15,0	1/1:1,13:13:33.09:368,33,0	1/1:2,17:20:53.88:580,54,0	1/1:1,19:20:57.14:635,57,0	1/1:0,2:2:6.02:67,6,0
chr10	27809720	.	GA	G	12907.95	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-5.944;DP=633;FS=25.589;HRun=9;HaplotypeScore=72.6185;InbreedingCoeff=0.9777;MQ=72.55;MQ0=0;MQRankSum=-7.392;QD=21.59;ReadPosRankSum=5.508;VQSLOD=3.5358;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,34:35:87.05:796,87,0	1/1:1,4:5:12:110,12,0	0/0:19,0:19:43.20:0,43,429	0/0:16,0:16:18.95:0,19,192	1/1:2,30:32:83.96:752,84,0	1/1:4,29:33:78.04:712,78,0	1/1:3,10:13:30.01:274,30,0	1/1:3,26:29:78.02:707,78,0	1/1:3,16:19:48.02:438,48,0	1/1:6,21:27:63.03:576,63,0	1/1:8,10:18:32.93:291,33,0	1/1:2,18:20:42.01:384,42,0	1/1:2,20:22:51.02:467,51,0	1/1:3,18:21:39.01:356,39,0	1/1:5,26:31:72.03:658,72,0	1/1:1,31:32:90.05:824,90,0	1/1:4,24:28:60.03:549,60,0	1/1:1,7:8:21.01:192,21,0	1/1:2,9:11:27.01:247,27,0	1/1:5,24:29:60.02:549,60,0	1/1:3,16:19:39.02:357,39,0	1/1:3,15:17:42.02:384,42,0	1/1:4,21:25:60.01:548,60,0	1/1:3,23:26:54.03:494,54,0	1/1:7,13:20:41.99:379,42,0	1/1:1,30:31:90.05:824,90,0	1/1:4,28:32:75.04:685,75,0	1/1:0,14:14:39.02:356,39,0
chr10	27809978	.	TATACATAC	T	8654.45	PASS	AB=0.783;AC=46;AF=0.852;AN=54;BaseQRankSum=0.966;DP=746;FS=20.159;HRun=0;HaplotypeScore=245.1569;InbreedingCoeff=0.3903;MQ=47.64;MQ0=13;MQRankSum=-0.451;QD=13.85;ReadPosRankSum=3.800;VQSLOD=2.0913;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:7,17:24:5.62:146,6,0	1/1:2,9:12:6.02:133,6,0	0/0:29,0:10:15.05:0,15,309	0/0:45,0:14:18.06:0,18,371	1/1:6,27:33:1.53:3,2,0	1/1:10,18:28:6.02:154,6,0	0/1:6,14:20:29.20:138,0,29	0/1:42,1:42:27.69:576,0,28	1/1:7,22:29:6.02:153,6,0	1/1:7,28:35:81.25:1854,81,0	0/0:10,17:27:2.93:0,3,30	1/1:1,22:23:15.05:384,15,0	1/1:9,23:32:9.03:231,9,0	1/1:4,19:23:14.63:383,15,0	1/1:8,19:27:9.03:230,9,0	1/1:7,29:36:27.09:690,27,0	1/1:4,15:19:9.03:188,9,0	1/1:3,6:9:2.85:45,3,0	1/1:4,13:16:36.12:824,36,0	1/1:10,29:39:0.72:2,1,0	./.	1/1:5,19:23:8.63:230,9,0	1/1:6,27:33:1.39:75,1,0	1/1:3,13:16:2.85:77,3,0	1/1:9,15:24:10.74:234,11,0	1/1:15,22:37:18.04:1161,18,0	1/1:5,19:24:18.06:456,18,0	1/1:4,14:18:12.51:288,13,0
chr10	27810002	.	CAT	C	1091.49	PASS	AB=0.990;AC=20;AF=0.357;AN=56;BaseQRankSum=12.622;DP=759;FS=16.135;HRun=0;HaplotypeScore=227.2830;InbreedingCoeff=-0.3902;MQ=48.90;MQ0=17;MQRankSum=-9.559;QD=2.33;ReadPosRankSum=12.057;VQSLOD=-0.2486;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:23:6.10:6,0,75	1/1:11,0:11:5.34:21,5,0	0/0:40,0:16:48.15:0,48,686	0/0:52,0:20:50.91:0,51,785	0/0:31,0:31:10.26:0,10,168	0/1:23,0:23:3.69:4,0,193	0/0:23,0:23:5.65:0,6,233	0/1:28,5:32:99:320,0,707	0/1:27,0:27:9.72:10,0,114	0/1:33,0:33:99:339,0,165	0/0:26,0:26:17.79:0,18,226	0/1:26,0:26:36.71:37,0,106	0/0:34,0:34:2.64:0,3,392	0/1:25,0:25:27.70:28,0,226	0/1:27,0:27:6.92:7,0,253	0/1:34,0:34:70.39:70,0,135	0/1:19,1:20:43.76:44,0,45	0/1:12,0:11:27.11:27,0,207	0/1:22,0:20:99:137,0,239	0/0:36,0:37:20.15:0,20,298	0/0:17,0:17:9.50:0,9,129	0/0:30,0:29:2.61:0,3,355	0/1:30,0:30:3.09:3,0,77	0/1:17,0:17:0.14:0,0,117	0/1:24,0:24:5.15:5,0,291	0/1:31,0:31:99:145,0,497	0/1:29,0:29:25.84:26,0,342	0/1:22,0:21:10.03:10,0,196
chr10	27810699	.	T	TA	16106.64	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-6.614;DP=604;FS=1.917;HRun=8;HaplotypeScore=54.8084;InbreedingCoeff=0.9231;MQ=77.38;MQ0=0;MQRankSum=-5.623;QD=28.01;ReadPosRankSum=3.710;VQSLOD=5.3009;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,19:19:51.15:589,51,0	1/1:0,10:10:27.08:312,27,0	0/0:22,0:21:35.96:0,36,326	0/0:7,0:7:11.96:0,12,109	1/1:4,25:29:72.17:816,72,0	1/1:3,24:27:66.20:762,66,0	1/1:3,12:15:30.09:346,30,0	1/1:11,21:32:38.61:670,39,0	1/1:1,20:21:60.18:692,60,0	1/1:5,26:31:75.22:866,75,0	1/1:4,8:12:27.08:308,27,0	1/1:5,18:23:20.69:492,21,0	1/1:6,23:29:63.19:727,63,0	1/1:2,25:27:72.21:831,72,0	1/1:3,20:23:57.17:658,57,0	1/1:1,31:32:84.25:969,84,0	1/1:1,17:18:45.13:519,45,0	1/1:1,8:9:21.06:242,21,0	1/1:3,17:20:57.13:629,57,0	1/1:1,33:34:99:1143,99,0	1/1:1,15:16:45.13:519,45,0	1/1:2,20:22:54.03:591,54,0	1/1:2,22:24:38.71:682,39,0	1/1:1,7:8:18.05:208,18,0	1/1:3,23:26:54.16:623,54,0	1/1:2,19:21:57.15:647,57,0	1/1:6,38:44:99:1196,105,0	1/1:1,2:3:6.02:69,6,0
chr10	27814582	.	CTGTGTGTG	C	786.60	PASS	AB=0.948;AC=18;AF=0.529;AN=34;BaseQRankSum=2.013;DP=416;FS=13.902;HRun=0;HaplotypeScore=98.6239;InbreedingCoeff=0.1633;MQ=59.72;MQ0=10;MQRankSum=-0.871;QD=4.47;ReadPosRankSum=0.700;VQSLOD=0.8335;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:8.96:0,9,68	./.	./.	./.	1/1:10,0:9:3.01:43,3,0	0/1:12,3:15:41.74:66,0,42	1/1:25,0:25:10.90:116,11,0	0/0:27,0:26:5.77:0,6,14	./.	0/0:7,0:6:0.47:0,0,1	0/0:12,0:10:0:0,0,0	1/1:10,2:13:6.02:109,6,0	./.	1/1:12,4:16:3:74,3,0	1/1:12,5:16:7.43:128,7,0	1/1:6,4:10:6.02:111,6,0	0/1:22,0:23:51.90:52,0,67	0/0:16,0:15:5.67:0,6,38	0/1:16,0:16:22.65:23,0,36	0/0:10,0:10:2.60:0,3,10	./.	./.	./.	0/1:21,0:21:11.88:97,0,12	./.	1/1:10,0:10:6.02:87,6,0	./.	./.
chr10	27814944	.	T	TAC	22289.86	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-5.577;DP=506;FS=3.880;HRun=0;HaplotypeScore=80.1623;InbreedingCoeff=0.8710;MQ=75.50;MQ0=0;MQRankSum=-8.289;QD=47.53;ReadPosRankSum=6.030;VQSLOD=6.0674;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,26:30:75.26:1449,75,0	1/1:0,1:1:3.01:58,3,0	0/0:20,0:19:57.15:0,57,802	0/0:17,0:17:45.10:0,45,628	1/1:0,13:13:18.06:347,18,0	1/1:1,19:21:54.19:1041,54,0	1/1:0,27:28:75.26:1449,75,0	1/1:2,10:13:27.09:502,27,0	1/1:1,17:18:42.14:811,42,0	1/1:2,11:13:33.11:626,33,0	1/1:0,10:10:12.04:230,12,0	1/1:2,22:25:63.22:1217,63,0	1/1:0,19:19:51.17:984,51,0	1/1:3,19:22:45.15:869,45,0	1/1:0,20:20:54.19:1043,54,0	1/1:1,12:13:36.12:695,36,0	1/1:1,20:21:54.19:1043,54,0	1/1:2,20:22:63.22:1213,63,0	1/1:1,15:16:48.15:886,48,0	1/1:0,14:14:21.07:400,21,0	1/1:3,36:40:99:1912,99,0	1/1:0,12:12:33.11:629,33,0	1/1:2,12:14:23.75:461,24,0	1/1:2,29:31:84.29:1623,84,0	1/1:0,9:9:24.08:462,24,0	1/1:1,22:23:66.23:1248,66,0	1/1:2,16:18:48.16:918,48,0	1/1:0,3:3:9.03:173,9,0
chr10	27815293	.	G	GT	5189.31	PASS	AB=0.819;AC=53;AF=0.946;AN=56;BaseQRankSum=1.338;DP=392;FS=15.189;HRun=0;HaplotypeScore=215.0344;InbreedingCoeff=-0.0650;MQ=82.99;MQ0=0;MQRankSum=-7.933;QD=13.24;ReadPosRankSum=6.311;VQSLOD=4.1764;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,4:5:6.35:43,6,0	1/1:0,3:3:8.62:45,9,0	0/1:22,1:16:63.32:63,0,239	0/1:12,2:13:73.22:73,0,146	1/1:1,21:22:47.86:241,48,0	1/1:1,22:23:63.47:340,63,0	1/1:0,10:10:28.79:150,29,0	1/1:2,7:9:18.62:120,19,0	1/1:0,18:19:54.76:306,55,0	1/1:1,18:19:52.96:315,53,0	1/1:0,20:20:50.81:236,51,0	1/1:0,15:15:43.22:230,43,0	1/1:0,17:17:46.46:248,46,0	1/1:0,9:9:25.56:128,26,0	1/1:1,10:11:28.79:152,29,0	1/1:1,12:13:34.77:189,35,0	1/1:2,9:10:26.08:155,26,0	1/1:0,3:3:8.83:54,9,0	0/1:3,3:6:5.41:76,0,5	1/1:0,29:29:83.23:440,83,0	1/1:0,3:3:8.76:51,9,0	1/1:0,16:16:44.93:223,45,0	1/1:0,25:25:66.98:322,67,0	1/1:0,6:6:11.79:70,12,0	1/1:0,14:14:40.22:210,40,0	1/1:0,16:16:47.15:292,47,0	1/1:4,20:23:61.17:312,61,0	1/1:0,6:6:17.57:103,18,0
chr10	27815294	.	A	AG	10913.39	PASS	AB=0.921;AC=54;AF=0.964;AN=56;BaseQRankSum=-0.693;DP=457;FS=11.622;HRun=2;HaplotypeScore=223.2876;InbreedingCoeff=-0.0476;MQ=78.88;MQ0=0;MQRankSum=-7.066;QD=23.88;ReadPosRankSum=5.187;VQSLOD=2.6509;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,4:7:6.66:84,7,0	1/1:0,3:3:9.01:88,9,0	0/1:23,1:17:99:112,0,152	0/1:13,2:13:82.86:98,0,83	1/1:5,21:26:54.04:504,54,0	1/1:3,22:25:69.10:672,69,0	1/1:3,10:13:35.62:339,36,0	1/1:6,7:13:39.05:388,39,0	1/1:3,18:21:59.82:559,60,0	1/1:6,18:24:70.03:683,70,0	1/1:2,20:22:60.04:553,60,0	1/1:0,15:15:45.07:438,45,0	1/1:2,17:19:51.06:484,51,0	1/1:2,9:11:30.03:283,30,0	1/1:6,10:16:36.05:344,36,0	1/1:3,12:15:39.05:380,39,0	1/1:3,9:11:30.03:289,30,0	1/1:2,3:5:15.04:159,15,0	1/1:8,3:11:8.71:222,9,0	1/1:3,29:32:93.12:887,93,0	1/1:2,3:5:12.01:119,12,0	1/1:0,16:16:48.05:453,48,0	1/1:3,25:28:75.03:682,75,0	1/1:2,6:8:15.68:166,16,0	1/1:3,14:17:48.06:462,48,0	1/1:4,16:20:54.12:565,54,0	1/1:8,20:27:78.95:717,79,0	1/1:0,6:6:18.04:182,18,0
chr10	27817620	.	TTTTCTTTCTTTCTTTCTTTC	T	16807	PASS	AB=0.806;AC=49;AF=0.907;AN=54;BaseQRankSum=5.188;DP=503;FS=26.394;HRun=0;HaplotypeScore=250.0069;InbreedingCoeff=0.0806;MQ=63.05;MQ0=3;MQRankSum=-2.130;QD=34.80;ReadPosRankSum=-0.539;VQSLOD=2.6157;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:17,1:18:12.03:328,12,0	1/1:3,6:9:9.03:475,9,0	0/0:13,0:12:2.98:0,3,21	./.	1/1:7,12:19:8.99:338,9,0	1/1:9,16:25:18.06:952,18,0	1/1:9,0:9:12.04:359,12,0	1/1:24,5:28:13.65:210,14,0	1/1:6,6:12:6.02:318,6,0	1/1:10,17:27:44.79:1680,45,0	1/1:8,13:21:30.10:1209,30,0	1/1:6,13:19:30.10:1588,30,0	1/1:16,9:25:15.05:790,15,0	1/1:11,6:17:3.01:159,3,0	1/1:9,10:19:24.08:1266,24,0	1/1:8,20:28:33.11:1751,33,0	1/1:14,0:14:12.04:304,12,0	1/1:10,5:14:4.28:315,4,0	1/1:11,5:16:15.03:477,15,0	1/1:21,13:34:27.01:751,27,0	1/1:7,0:7:3.01:69,3,0	1/1:8,5:13:12.04:498,12,0	1/1:12,14:26:15.05:755,15,0	1/1:3,4:8:2.68:159,3,0	1/1:3,11:14:24.08:1274,24,0	0/1:14,0:22:75.36:321,0,75	0/1:14,0:26:23.76:380,0,24	0/1:11,0:11:78.96:79,0,130
chr10	27817769	.	C	CT	18318.34	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-2.007;DP=589;FS=2.584;HRun=0;HaplotypeScore=98.4267;InbreedingCoeff=0.9673;MQ=73.72;MQ0=0;MQRankSum=-4.465;QD=34.11;ReadPosRankSum=3.238;VQSLOD=4.4651;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,20:21:60.20:789,60,0	1/1:0,10:10:24.08:319,24,0	0/0:14,0:14:42.14:0,42,588	0/0:11,0:11:7.50:0,7,318	0/0:27,0:27:76.47:0,76,429	1/1:0,20:20:51.17:660,51,0	1/1:1,11:13:35.10:470,35,0	1/1:5,25:30:70.98:908,71,0	1/1:0,20:20:54.18:697,54,0	1/1:1,36:37:99:1412,106,0	1/1:0,30:30:84.18:1053,84,0	1/1:0,18:18:48.16:633,48,0	1/1:0,17:17:39.13:511,39,0	1/1:3,19:22:59.73:783,60,0	1/1:0,26:26:75.24:980,75,0	1/1:1,28:29:81.26:1061,81,0	1/1:3,17:20:39.11:516,39,0	1/1:0,13:13:31.46:432,31,0	1/1:2,16:18:47.70:610,48,0	1/1:3,33:36:84.41:1104,84,0	1/1:1,16:17:41.64:554,42,0	1/1:1,21:22:60.19:769,60,0	1/1:0,16:16:45.15:590,45,0	1/1:1,8:9:21.07:277,21,0	1/1:1,28:29:78.25:1015,78,0	1/1:3,20:23:60.17:780,60,0	1/1:1,32:33:87.21:1120,87,0	1/1:1,7:8:21.03:278,21,0
chr10	27819651	.	ATGG	A	8309.74	PASS	AB=0.579;AC=51;AF=0.911;AN=56;BaseQRankSum=0.324;DP=865;FS=2.855;HRun=0;HaplotypeScore=117.2651;InbreedingCoeff=0.5807;MQ=62.35;MQ0=25;MQRankSum=2.664;QD=10.06;ReadPosRankSum=2.807;VQSLOD=4.6791;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:26,32:58:14.84:216,15,0	1/1:4,8:12:9.50:131,10,0	0/0:12,0:6:8.78:0,9,61	0/0:27,0:19:8.39:0,8,47	1/1:23,16:39:3.09:314,3,0	1/1:14,16:30:15.05:217,15,0	1/1:9,21:30:6.49:88,6,0	1/1:33,0:26:38.36:270,38,0	1/1:7,33:40:30.10:433,30,0	1/1:22,17:37:54.03:653,54,0	1/1:14,12:26:9.03:130,9,0	1/1:4,22:26:17.85:260,18,0	1/1:8,38:46:42.03:601,42,0	1/1:4,24:28:30.10:433,30,0	1/1:6,27:33:29.81:399,30,0	1/1:8,29:37:30.10:420,30,0	1/1:10,37:47:39.13:564,39,0	1/1:2,17:19:18.06:260,18,0	1/1:9,10:19:28.09:257,28,0	1/1:16,14:29:21.06:289,21,0	0/1:12,32:42:3.89:478,0,4	1/1:11,22:33:17.93:259,18,0	1/1:17,17:33:11.15:137,11,0	1/1:5,39:44:6.01:406,6,0	1/1:11,15:25:15.05:214,15,0	1/1:16,12:21:35.89:395,36,0	1/1:2,16:18:18.06:260,18,0	1/1:5,2:7:21:226,21,0
chr10	27822341	.	T	TA	12612.57	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-1.785;DP=632;FS=7.797;HRun=10;HaplotypeScore=182.0749;InbreedingCoeff=0.9359;MQ=68.37;MQ0=0;MQRankSum=-3.676;QD=22.40;ReadPosRankSum=0.046;VQSLOD=3.1776;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,13:18:44.85:416,45,0	1/1:2,6:8:18.04:191,18,0	0/0:16,0:17:31.77:0,32,234	0/0:10,0:9:13.63:0,14,104	1/1:15,30:45:88.24:970,88,0	1/1:7,18:25:65.72:629,66,0	1/1:6,12:18:39.82:386,40,0	1/1:10,18:28:66.12:672,66,0	1/1:10,16:27:53.59:633,54,0	1/1:11,20:31:69.16:720,69,0	1/1:18,22:40:83.79:874,84,0	1/1:9,11:21:27.66:387,28,0	1/1:5,13:18:47.97:471,48,0	1/1:9,11:20:38.13:425,38,0	1/1:5,18:23:52.72:586,53,0	1/1:6,15:21:45.11:527,45,0	1/1:6,12:18:42.04:432,42,0	1/1:1,4:5:6.02:64,6,0	1/1:6,11:18:41.85:404,42,0	1/1:12,13:26:42.97:523,43,0	1/1:4,7:11:10.76:210,11,0	1/1:14,16:31:35.33:526,35,0	1/1:6,20:27:77.48:735,77,0	1/1:3,7:9:20.97:207,21,0	1/1:10,15:25:37.57:527,38,0	1/1:12,23:35:89.88:854,90,0	0/0:41,1:42:20.68:0,21,372	1/1:6,8:14:27.68:243,28,0
chr10	27822391	.	G	GTGATC	45907.80	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-1.640;DP=645;FS=2.044;HRun=0;HaplotypeScore=140.3348;InbreedingCoeff=0.9476;MQ=78.75;MQ0=0;MQRankSum=-10.622;QD=76.64;ReadPosRankSum=5.478;VQSLOD=6.6259;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,16:19:36.12:1139,36,0	1/1:2,9:12:27.09:855,27,0	0/0:23,0:23:66.23:0,66,1347	0/0:23,0:23:45.07:0,45,1076	1/1:1,27:31:78.27:2340,78,0	1/1:4,19:23:63.19:1790,63,0	1/1:7,11:20:45.46:1287,45,0	1/1:8,17:32:90.27:2470,90,0	1/1:1,26:28:75.26:2344,75,0	1/1:8,19:27:78.27:2460,78,0	1/1:4,19:23:54.19:1626,54,0	1/1:1,16:17:48.16:1493,48,0	1/1:4,18:24:60.21:1824,60,0	1/1:2,15:17:42.14:1329,42,0	1/1:6,20:27:75.26:2310,75,0	1/1:8,11:20:42.14:1295,42,0	1/1:3,14:19:45.15:1357,45,0	1/1:1,2:3:9.03:237,9,0	1/1:9,8:18:48.16:1464,48,0	1/1:5,25:32:78.27:2392,78,0	1/1:2,9:11:15.05:402,15,0	1/1:5,20:26:69.24:2147,69,0	1/1:8,23:34:75.26:2264,75,0	1/1:1,7:8:12.04:373,12,0	1/1:6,28:35:90.31:2795,90,0	1/1:5,41:46:99:4116,135,0	1/1:1,30:36:92.92:2934,93,0	1/1:2,8:10:30.10:864,30,0
chr10	27822393	.	G	GA	5027.46	PASS	AB=0.994;AC=42;AF=0.750;AN=56;BaseQRankSum=8.085;DP=605;FS=5.705;HRun=0;HaplotypeScore=224.0567;InbreedingCoeff=0.0970;MQ=80.54;MQ0=0;MQRankSum=-8.954;QD=9.03;ReadPosRankSum=12.002;VQSLOD=2.9759;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:18:38.77:175,39,0	1/1:10,0:10:25.18:117,25,0	0/0:24,0:24:69.23:0,69,943	0/0:24,0:24:45.64:0,46,750	1/1:31,0:31:27.09:230,27,0	1/1:20,0:22:47.33:264,47,0	0/1:20,0:20:9.32:81,0,9	0/1:24,0:24:69.59:168,0,70	1/1:29,0:29:26.07:263,26,0	1/1:26,0:26:30.76:277,31,0	0/1:22,0:22:36.83:146,0,37	1/1:16,0:16:38.42:188,38,0	0/1:23,0:23:1.43:166,0,1	1/1:16,0:16:19.24:159,19,0	1/1:26,0:26:13.85:226,14,0	0/1:15,0:15:15.35:104,0,15	1/1:17,0:17:5.23:108,5,0	0/1:4,0:4:17.40:17,0,26	0/1:14,0:14:28.84:105,0,29	0/1:29,1:30:14.54:276,0,15	0/1:10,0:10:2.51:23,0,3	1/1:23,0:23:50.50:264,51,0	0/1:30,1:31:0.68:247,0,1	1/1:8,1:8:6.04:42,6,0	1/1:35,0:35:24.38:296,24,0	1/1:42,0:42:99:544,117,0	1/1:34,1:35:86.46:399,86,0	1/1:9,0:9:25.39:144,25,0
chr10	27822730	.	A	AT	16636.01	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-5.888;DP=645;FS=20.118;HRun=8;HaplotypeScore=66.0498;InbreedingCoeff=0.9651;MQ=75.85;MQ0=0;MQRankSum=-5.959;QD=27.09;ReadPosRankSum=4.446;VQSLOD=3.4414;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,17:20:48.14:553,48,0	1/1:1,10:11:24.03:260,24,0	0/0:16,0:16:16.95:0,17,165	0/0:15,0:14:10.25:0,10,145	1/1:4,22:26:66.09:730,66,0	1/1:4,31:36:84.08:949,84,0	1/1:2,12:14:30.09:346,30,0	1/1:6,32:38:96.19:1043,96,0	1/1:4,18:22:45.13:519,45,0	1/1:0,40:40:99:1244,114,0	1/1:4,30:34:90.05:973,90,0	1/1:2,11:13:27.08:312,27,0	1/1:3,27:30:69.20:796,69,0	1/1:1,17:18:48.14:554,48,0	1/1:0,19:19:51.15:589,51,0	1/1:3,20:23:51.15:589,51,0	1/1:4,16:20:36.11:415,36,0	1/1:3,8:11:18.90:195,19,0	1/1:1,17:18:51.10:555,51,0	1/1:1,29:30:87.15:962,87,0	1/1:1,13:14:36.11:415,36,0	1/1:1,15:16:33.10:381,33,0	1/1:2,23:25:60.17:686,60,0	1/1:1,17:18:48.14:554,48,0	1/1:6,24:30:63.18:721,63,0	1/1:3,34:37:99:1092,99,0	1/1:4,28:31:41.75:726,42,0	1/1:6,12:18:38.16:477,38,0
chr10	27823478	.	A	ACT	2600.13	PASS	AB=0.938;AC=27;AF=0.482;AN=56;BaseQRankSum=0.227;DP=508;FS=24.102;HRun=0;HaplotypeScore=114.3798;InbreedingCoeff=-0.7534;MQ=48.10;MQ0=13;MQRankSum=2.186;QD=5.74;ReadPosRankSum=2.899;VQSLOD=1.1814;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:25:15.22:147,0,15	0/1:9,0:9:33.13:33,0,68	0/0:29,0:12:29.99:0,30,278	0/0:26,0:11:29.92:0,30,263	0/1:12,17:29:55.86:97,0,56	0/1:13,14:28:49.35:49,0,80	0/1:9,5:14:20.15:31,0,20	0/1:26,0:26:99:262,0,118	0/1:7,5:14:24.24:24,0,60	0/1:5,2:6:29.76:30,0,33	0/1:16,0:15:6.98:136,0,7	0/1:24,0:24:36.09:186,0,36	0/1:13,0:13:18.64:83,0,19	0/1:14,0:13:6.83:82,0,7	0/1:21,0:21:67.52:126,0,68	0/1:13,0:13:24.99:116,0,25	0/1:18,0:18:21.36:175,0,21	0/1:8,0:8:32.82:33,0,62	0/1:15,0:14:63.19:63,0,94	0/1:16,0:16:59.70:144,0,60	1/1:15,0:14:11.12:79,11,0	0/1:13,0:12:21.04:152,0,21	0/1:24,0:21:22.29:119,0,22	0/1:21,0:21:8.98:86,0,9	0/1:14,0:14:34.51:35,0,82	0/1:19,0:19:58.26:206,0,58	0/1:13,0:13:46.67:152,0,47	0/1:20,0:20:58.11:110,0,58
chr10	27823783	.	A	AT	11011	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-4.182;DP=412;FS=0.000;HRun=8;HaplotypeScore=36.5328;InbreedingCoeff=0.8444;MQ=70.86;MQ0=0;MQRankSum=-3.708;QD=27.46;ReadPosRankSum=1.549;VQSLOD=4.8921;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,9:10:27:294,27,0	1/1:2,7:9:21.06:242,21,0	0/0:5,0:5:9:0,9,82	0/0:6,0:6:10.24:0,10,83	1/1:3,28:32:75.22:865,75,0	1/1:0,15:15:42.12:485,42,0	1/1:2,13:15:36.11:415,36,0	1/1:3,23:26:66.16:739,66,0	1/1:1,11:12:30.09:346,30,0	1/1:1,14:15:42.12:485,42,0	1/1:3,18:20:51.15:588,51,0	1/1:1,10:12:32.93:361,33,0	1/1:4,10:14:21.06:241,21,0	1/1:1,21:23:48.14:553,48,0	1/1:2,17:19:45.09:504,45,0	1/1:1,14:15:18.05:208,18,0	1/1:2,6:8:18.05:208,18,0	1/1:0,12:13:30.09:346,30,0	1/1:2,20:21:54.13:611,54,0	1/1:0,15:15:44.97:469,45,0	1/1:0,3:3:9.03:104,9,0	1/1:0,15:15:45.05:502,45,0	1/1:1,17:17:36.11:415,36,0	1/1:0,4:4:12.04:138,12,0	1/1:0,14:14:36.11:415,36,0	1/1:0,22:22:66.18:752,66,0	1/1:3,19:21:51.15:589,51,0	1/1:2,5:7:6.42:134,6,0
chr10	27824995	.	T	TACAC	4504.75	PASS	AB=0.760;AC=49;AF=0.942;AN=52;BaseQRankSum=-1.358;DP=507;FS=2.597;HRun=0;HaplotypeScore=106.0529;InbreedingCoeff=-0.0980;MQ=68.42;MQ0=9;MQRankSum=0.208;QD=9.86;ReadPosRankSum=0.708;VQSLOD=4.1690;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:14,5:20:11.78:223,12,0	1/1:6,4:12:6.02:141,6,0	./.	./.	0/1:10,3:18:29.06:160,0,29	1/1:16,0:16:6.02:138,6,0	1/1:16,5:23:3.48:71,3,0	1/1:23,0:23:5.52:45,6,0	1/1:12,5:18:21.07:458,21,0	1/1:12,0:12:20.93:225,21,0	1/1:9,0:9:11.99:110,12,0	0/1:9,2:13:40.83:64,0,41	1/1:10,6:19:6.02:137,6,0	1/1:8,7:17:15.05:351,15,0	1/1:16,6:21:6.02:141,6,0	1/1:9,4:15:12.04:249,12,0	1/1:12,9:25:11.78:223,12,0	1/1:9,0:9:6.45:66,6,0	1/1:20,0:19:9.03:142,9,0	1/1:9,4:15:8.32:153,8,0	1/1:19,4:25:4.76:80,5,0	1/1:11,5:17:5.75:83,6,0	1/1:9,0:16:4.96:81,5,0	1/1:12,12:30:12:258,12,0	1/1:9,5:15:9.03:211,9,0	1/1:24,0:23:30.10:526,30,0	0/1:11,1:13:9.99:10,0,39	1/1:4,0:4:11.95:160,12,0
chr10	27825636	.	ATGTGTGTG	A	7453.16	PASS	AB=0.845;AC=51;AF=0.911;AN=56;BaseQRankSum=2.243;DP=467;FS=0.000;HRun=0;HaplotypeScore=160.6583;InbreedingCoeff=0.2512;MQ=58.03;MQ0=8;MQRankSum=0.507;QD=16.67;ReadPosRankSum=1.023;VQSLOD=3.4547;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,1:13:6:97,6,0	1/1:6,2:7:12.02:219,12,0	0/0:20,0:10:3.01:0,3,42	0/1:19,0:12:0.83:1,0,23	1/1:23,2:25:21.03:265,21,0	1/1:18,5:22:35.97:528,36,0	1/1:18,1:20:33.05:476,33,0	1/1:21,0:21:12.25:154,12,0	1/1:10,0:10:9.02:128,9,0	1/1:22,1:23:35.33:557,35,0	1/1:11,4:15:29.84:419,30,0	0/1:8,3:11:6.68:261,0,7	1/1:18,4:22:22.41:407,22,0	1/1:12,2:14:9.01:167,9,0	1/1:14,2:17:15.49:417,15,0	1/1:13,6:19:32.80:511,33,0	1/1:5,0:12:3.01:56,3,0	0/1:10,0:15:7.86:50,0,8	1/1:11,1:12:5.88:111,6,0	1/1:11,2:15:26.27:368,26,0	1/1:25,0:23:18.97:217,19,0	1/1:13,1:14:18:242,18,0	1/1:10,3:13:20.09:284,20,0	1/1:14,2:16:4.13:89,4,0	1/1:13,5:18:21.07:410,21,0	1/1:19,4:23:44.80:664,45,0	1/1:14,3:17:19.82:281,20,0	1/1:4,1:5:3.01:74,3,0
chr10	27825674	.	ATG	A	3715.54	PASS	AB=0.636;AC=47;AF=0.839;AN=56;BaseQRankSum=4.018;DP=521;FS=2.790;HRun=0;HaplotypeScore=153.3918;InbreedingCoeff=0.5915;MQ=50.88;MQ0=14;MQRankSum=-2.156;QD=8.26;ReadPosRankSum=4.325;VQSLOD=3.1092;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:9,12:19:24.37:56,0,24	1/1:1,8:9:6.02:67,6,0	0/0:21,0:8:22.32:0,22,283	0/0:24,0:10:15.06:0,15,291	1/1:4,17:21:0.47:1,0,0	1/1:4,17:20:15.25:144,15,0	1/1:10,11:21:7.57:69,8,0	1/1:9,11:19:33.09:384,33,0	1/1:5,8:13:2.90:16,3,0	1/1:12,25:37:74.80:849,75,0	1/1:5,13:18:8.94:82,9,0	1/1:5,3:8:17.92:189,18,0	1/1:8,20:27:12.60:133,13,0	1/1:3,8:11:6.02:64,6,0	1/1:7,14:21:8.84:89,9,0	1/1:3,14:17:17.66:149,18,0	0/0:16,0:16:23.39:0,23,279	0/0:10,0:10:9.17:0,9,91	1/1:6,7:13:19.30:211,19,0	1/1:4,17:21:12.03:131,12,0	1/1:9,15:24:3.01:36,3,0	1/1:6,14:20:3.48:34,3,0	1/1:6,15:21:6.59:49,7,0	1/1:11,2:13:0.94:1,1,0	1/1:4,14:18:12.75:115,13,0	1/1:11,17:26:48.10:547,48,0	1/1:4,14:18:20.79:201,21,0	1/1:2,6:8:9.02:98,9,0
chr10	27825676	.	G	GTA	608.84	PASS	AB=1.000;AC=14;AF=0.250;AN=56;BaseQRankSum=-3.105;DP=519;FS=70.221;HRun=0;HaplotypeScore=166.1301;InbreedingCoeff=-0.1609;MQ=50.89;MQ0=14;MQRankSum=4.271;QD=2.39;ReadPosRankSum=1.130;VQSLOD=0.4181;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:21,0:19:7.24:7,0,11	0/0:9,0:9:5.13:0,5,30	0/0:22,0:9:24.05:0,24,319	0/0:23,0:11:15.09:0,15,319	0/0:19,0:19:5.92:0,6,40	0/1:21,0:20:26.23:26,0,68	0/0:20,0:20:17.15:0,17,122	0/1:18,0:17:26.89:164,0,27	0/0:14,0:14:5.87:0,6,39	0/1:35,0:35:97.98:309,0,98	0/1:19,0:19:0.65:1,0,34	0/1:9,0:9:17.17:17,0,45	0/0:27,0:26:3.16:0,3,79	0/0:12,0:12:3.11:0,3,8	0/0:20,0:20:14.15:0,14,90	0/0:18,0:18:18.40:0,18,105	0/0:16,0:16:24.03:0,24,323	0/0:11,0:11:17.93:0,18,189	0/1:13,0:13:58.32:58,0,79	0/0:21,0:21:7.84:0,8,37	0/1:23,0:23:0.48:0,0,63	0/1:22,0:22:4.28:4,0,63	0/1:21,0:21:1.77:2,0,64	0/0:7,7:14:5.83:0,6,34	0/0:18,0:18:15.57:0,16,89	0/1:26,0:24:80.14:103,0,80	0/1:18,0:18:20.93:29,0,21	1/1:9,0:9:4.40:24,4,0
chr10	27826087	.	TG	T	17754.52	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=2.992;DP=752;FS=0.854;HRun=6;HaplotypeScore=83.9789;InbreedingCoeff=0.9996;MQ=66.89;MQ0=0;MQRankSum=-0.984;QD=27.57;ReadPosRankSum=4.229;VQSLOD=5.2546;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,50:56:99:1483,138,0	1/1:0,14:14:39.10:419,39,0	0/0:24,0:22:49.18:0,49,584	0/0:14,0:13:31.57:0,32,345	1/1:2,29:31:81.20:870,81,0	1/1:3,28:31:74:778,74,0	1/1:4,23:27:63.15:677,63,0	1/1:3,34:37:96.19:1007,96,0	1/1:1,26:27:66.17:709,66,0	1/1:2,24:26:69.17:741,69,0	1/1:2,17:19:51.13:548,51,0	1/1:2,33:35:96.24:1031,96,0	1/1:1,22:23:60.15:645,60,0	1/1:1,33:34:87.22:935,87,0	1/1:1,24:25:75.18:802,75,0	1/1:3,20:23:57.14:613,57,0	0/0:36,0:36:99:0,99,1300	0/0:33,0:33:90.29:0,90,1183	1/1:2,16:18:48.12:515,48,0	1/1:2,21:23:57.14:612,57,0	1/1:7,25:32:72.18:774,72,0	1/1:1,25:26:72.18:773,72,0	1/1:1,21:22:63.16:677,63,0	1/1:0,25:25:72.18:774,72,0	1/1:2,19:21:48.12:515,48,0	1/1:3,26:29:72.15:763,72,0	1/1:0,26:26:75.19:805,75,0	1/1:4,10:14:27.07:290,27,0
chr10	27826093	.	GT	G	3975.58	PASS	AB=0.989;AC=42;AF=0.750;AN=56;BaseQRankSum=13.446;DP=751;FS=1.974;HRun=1;HaplotypeScore=132.5933;InbreedingCoeff=0.4235;MQ=66.26;MQ0=0;MQRankSum=0.032;QD=6.19;ReadPosRankSum=9.485;VQSLOD=-0.0778;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:54,1:55:49.92:363,50,0	1/1:15,0:15:10.81:94,11,0	0/0:26,0:23:51.54:0,52,689	0/0:18,0:16:30.42:0,30,507	1/1:31,0:31:9.47:175,9,0	1/1:30,0:30:37.33:183,37,0	1/1:24,0:24:29.56:170,30,0	0/1:42,0:42:79.37:79,0,146	0/1:30,1:31:31.57:143,0,32	0/1:26,0:26:15.23:71,0,15	0/1:19,0:19:1.14:138,0,1	1/1:33,1:34:77.59:316,78,0	1/1:24,0:24:18.84:148,19,0	1/1:33,0:33:70.18:273,70,0	1/1:26,1:27:17.04:186,17,0	1/1:21,0:21:22.32:132,22,0	0/0:34,0:34:99:0,102,1458	0/0:31,0:31:90.29:0,90,1291	0/1:19,0:19:14.73:61,0,15	1/1:23,0:23:1.98:123,2,0	1/1:26,0:26:33.60:159,34,0	0/1:29,1:30:6.37:206,0,6	1/1:23,0:23:8.93:162,9,0	1/1:25,0:25:57.91:216,58,0	1/1:19,1:20:37.66:157,38,0	1/1:27,0:27:14.79:94,15,0	1/1:27,0:27:39.37:243,39,0	1/1:10,0:10:22.27:84,22,0
chr10	27826934	.	G	GTT	1253.20	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.067;DP=515;FS=1.683;HRun=2;HaplotypeScore=67.4321;InbreedingCoeff=0.9885;MQ=64.63;MQ0=2;MQRankSum=-3.013;QD=44.76;ReadPosRankSum=1.713;VQSLOD=3.6784;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:75.24:0,75,1083	0/0:12,0:12:36.12:0,36,529	0/0:13,0:9:18.05:0,18,249	0/0:19,0:19:51.16:0,51,722	0/0:24,0:24:66.22:0,66,971	0/0:15,0:15:42.13:0,42,598	0/0:11,0:11:33.11:0,33,486	0/0:23,0:23:66.21:0,66,938	0/0:30,0:30:84.28:0,84,1235	0/0:18,0:18:51.17:0,51,749	0/0:13,0:13:33.11:0,33,485	0/0:14,0:14:42.14:0,42,618	0/0:20,0:20:54.17:0,54,775	0/0:19,0:19:54.18:0,54,794	0/0:22,0:22:66.22:0,66,970	0/0:24,0:24:66.22:0,66,972	1/1:1,14:15:42.14:784,42,0	1/1:2,10:12:16.14:588,16,0	0/0:12,0:12:33.11:0,33,485	0/0:15,0:14:36.08:0,36,505	0/0:27,0:27:72.24:0,72,1060	0/0:16,0:16:39.13:0,39,569	0/0:17,0:17:48.16:0,48,703	0/0:24,0:24:72.24:0,72,1059	0/0:17,0:17:48.16:0,48,705	0/0:17,0:17:42.13:0,42,602	0/0:27,0:27:78.26:0,78,1148	0/0:10,0:10:30.10:0,30,441
chr10	27830073	.	TTC	T	14099.92	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=12.303;DP=510;FS=27.847;HRun=0;HaplotypeScore=148.7271;InbreedingCoeff=0.9636;MQ=45.87;MQ0=1;MQRankSum=-9.650;QD=33.65;ReadPosRankSum=-1.210;VQSLOD=3.4148;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,8:11:23.80:207,24,0	1/1:1,7:8:21.06:294,21,0	0/0:13,0:13:29.24:0,29,496	0/0:15,0:15:39.09:0,39,601	1/1:1,32:31:54.14:766,54,0	1/1:1,15:14:42.10:599,42,0	1/1:2,11:13:36.08:509,36,0	1/1:4,15:16:45.14:628,45,0	1/1:3,7:10:27.07:366,27,0	1/1:2,15:17:43.70:629,44,0	1/1:6,17:22:60.08:785,60,0	1/1:2,14:16:48.12:671,48,0	1/1:5,8:13:32.99:421,33,0	1/1:2,19:20:60.11:822,60,0	1/1:4,18:22:66.12:879,66,0	1/1:2,9:11:33.03:425,33,0	0/0:38,0:38:99:0,107,1750	0/0:25,0:25:69.18:0,69,1204	1/1:6,9:11:29.99:358,30,0	1/1:5,29:34:93.22:1305,93,0	1/1:5,2:7:14.98:136,15,0	1/1:5,20:23:60.06:791,60,0	1/1:4,20:24:56.98:721,57,0	1/1:3,10:13:21.72:274,22,0	1/1:1,16:17:45.15:652,45,0	1/1:2,24:26:72.24:1052,72,0	1/1:6,16:22:59.98:746,60,0	1/1:0,3:2:5.99:66,6,0
chr10	27830083	.	AT	A	12958.22	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=12.840;DP=539;FS=20.485;HRun=3;HaplotypeScore=153.7411;InbreedingCoeff=0.9623;MQ=51.07;MQ0=0;MQRankSum=-8.678;QD=28.86;ReadPosRankSum=0.344;VQSLOD=2.7153;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,11:11:24.08:311,24,0	1/1:0,7:7:18.06:233,18,0	0/0:14,0:14:32.94:0,33,441	0/0:13,0:13:39.09:0,39,546	1/1:5,27:30:42.14:544,42,0	1/1:0,21:19:45.15:583,45,0	1/1:2,11:13:33.11:428,33,0	1/1:1,24:22:60.19:777,60,0	1/1:0,9:9:24.08:311,24,0	1/1:3,17:20:51.14:634,51,0	1/1:1,29:29:72.23:922,72,0	1/1:0,14:14:39.13:505,39,0	1/1:0,14:14:24.08:310,24,0	1/1:1,21:21:51.17:661,51,0	1/1:1,21:22:51.17:661,51,0	1/1:0,14:14:33.11:427,33,0	0/0:40,0:40:99:0,108,1592	0/0:23,0:23:66.21:0,66,968	1/1:2,14:13:33.11:426,33,0	1/1:3,33:36:93.29:1188,93,0	1/1:0,5:5:9.03:117,9,0	1/1:1,22:21:45.14:576,45,0	1/1:2,22:24:54.17:695,54,0	1/1:2,10:12:18.53:223,19,0	1/1:1,20:21:42.14:544,42,0	1/1:4,26:30:75.24:957,75,0	1/1:0,24:24:63.20:808,63,0	1/1:0,4:3:9.03:116,9,0
chr10	27830159	.	T	TTCTTATATGTTTGTAGGCA	31849.25	PASS	AB=1.000;AC=47;AF=0.839;AN=56;BaseQRankSum=2.144;DP=643;FS=10.012;HRun=0;HaplotypeScore=353.4314;InbreedingCoeff=0.8061;MQ=50.45;MQ0=0;MQRankSum=-6.321;QD=59.75;ReadPosRankSum=-0.155;VQSLOD=2.8418;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:11,0:11:76.58:309,0,77	1/1:7,0:7:15.04:1018,15,0	0/0:25,0:19:27.04:0,27,637	0/0:25,0:22:25.31:0,25,721	1/1:23,1:23:30.07:1189,30,0	1/1:28,0:28:18.06:927,18,0	1/1:10,0:10:12.04:865,12,0	1/1:32,0:29:60.07:2027,60,0	1/1:18,2:20:30.09:1957,30,0	1/1:28,2:30:51.02:2166,51,0	1/1:40,1:41:42.14:2313,42,0	1/1:12,1:13:11.96:349,12,0	1/1:20,4:24:27.09:1892,27,0	1/1:17,0:17:15.05:441,15,0	1/1:23,0:23:15.04:876,15,0	1/1:17,0:17:12.04:850,12,0	0/0:41,0:41:71.98:0,72,3073	0/0:19,0:19:42.08:0,42,1679	1/1:23,0:22:41.92:1137,42,0	1/1:36,3:39:51.11:2391,51,0	1/1:9,0:8:15.01:368,15,0	1/1:19,3:21:39.12:2166,39,0	1/1:21,0:21:24.08:1553,24,0	1/1:10,0:10:6.02:257,6,0	1/1:20,4:24:36.10:2345,36,0	1/1:35,0:35:33.04:1363,33,0	1/1:41,3:44:35.98:1909,36,0	1/1:7,2:8:24.03:1180,24,0
chr10	27831050	.	G	GC	21815.12	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-7.514;DP=556;FS=0.000;HRun=0;HaplotypeScore=56.0655;InbreedingCoeff=0.9462;MQ=81.66;MQ0=0;MQRankSum=-9.713;QD=42.03;ReadPosRankSum=5.657;VQSLOD=4.8677;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,36:36:87.30:1390,87,0	1/1:0,9:9:21.07:335,21,0	0/0:16,0:15:45.12:0,45,585	0/0:21,0:20:56.94:0,57,670	1/1:0,19:19:51.08:812,51,0	1/1:0,21:20:54.18:863,54,0	1/1:1,24:25:63.21:1007,63,0	1/1:0,34:34:99:1548,102,0	1/1:1,19:20:51.05:815,51,0	1/1:0,23:23:69.24:1101,69,0	1/1:2,16:18:48.16:754,48,0	1/1:0,22:22:63.21:1006,63,0	1/1:0,19:19:54.05:863,54,0	1/1:0,24:24:63.21:1007,63,0	1/1:0,16:16:39.13:623,39,0	1/1:1,18:19:45.15:719,45,0	1/1:0,18:18:51.17:815,51,0	1/1:0,12:12:33.11:518,33,0	1/1:0,12:12:33.04:474,33,0	1/1:0,17:17:48.16:752,48,0	1/1:1,30:31:72.25:1150,72,0	1/1:0,21:21:60.20:958,60,0	1/1:0,23:23:60.20:956,60,0	1/1:0,15:15:36.12:574,36,0	1/1:0,21:21:45.15:719,45,0	1/1:0,26:26:78.27:1241,78,0	1/1:0,16:16:45.15:719,45,0	1/1:0,2:2:6.02:96,6,0
chr10	27831805	.	T	TA	2516.62	PASS	AC=32;AF=1.000;AN=32;DP=231;FS=0.000;HRun=4;HaplotypeScore=48.5112;InbreedingCoeff=-0.0734;MQ=21.39;MQ0=80;QD=14.22;VQSLOD=2.0136;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	1/1:0,6:4:12.04:163,12,0	./.	./.	1/1:2,16:12:15.05:204,15,0	1/1:3,10:6:9.03:123,9,0	1/1:0,3:1:3.01:41,3,0	./.	./.	1/1:1,10:8:18.04:243,18,0	1/1:3,13:13:27.09:367,27,0	./.	./.	1/1:1,6:2:3.01:35,3,0	1/1:2,3:1:3.01:41,3,0	1/1:0,2:1:3.01:41,3,0	1/1:3,18:1:3.01:41,3,0	./.	./.	1/1:2,17:13:24.08:323,24,0	./.	1/1:1,10:8:15.05:201,15,0	1/1:1,12:12:21.07:282,21,0	./.	1/1:3,11:12:18.06:242,18,0	1/1:0,6:5:12.04:163,12,0	1/1:5,5:6:6.02:82,6,0	./.
chr10	27832075	.	TC	T	1502.53	PASS	AC=20;AF=1.000;AN=20;DP=125;FS=0.000;HRun=2;HaplotypeScore=48.7425;InbreedingCoeff=-0.0462;MQ=20.39;MQ0=46;QD=17.47;VQSLOD=3.4842;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,1:1:3.01:36,3,0	1/1:0,4:4:12.04:155,12,0	./.	./.	1/1:0,15:12:9.03:117,9,0	./.	./.	./.	./.	1/1:1,2:2:6.02:78,6,0	1/1:0,13:12:17.91:195,18,0	./.	./.	./.	./.	./.	./.	./.	./.	1/1:0,16:14:23.99:273,24,0	./.	1/1:0,8:8:17.97:195,18,0	1/1:0,5:5:8.94:79,9,0	./.	1/1:0,9:9:21.03:253,21,0	1/1:0,10:8:15.05:194,15,0	./.	./.
chr10	27832732	.	A	AG	7219.25	PASS	AC=48;AF=0.923;AN=52;BaseQRankSum=7.542;DP=365;FS=10.335;HRun=0;HaplotypeScore=82.8559;InbreedingCoeff=0.5985;MQ=42.58;MQ0=1;MQRankSum=-5.828;QD=24.47;ReadPosRankSum=7.162;VQSLOD=5.5651;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,3:3:9.03:117,9,0	1/1:1,6:7:18.06:234,18,0	0/0:38,0:24:63.21:0,63,867	0/0:30,0:26:50.56:0,51,845	1/1:0,35:38:50.63:663,51,0	1/1:2,7:9:15.67:238,16,0	1/1:3,3:6:1.92:39,2,0	./.	1/1:3,7:10:21.07:268,21,0	1/1:0,19:19:48.14:618,48,0	1/1:5,14:19:29.08:405,29,0	1/1:3,8:11:13.91:162,14,0	1/1:1,8:8:12.04:157,12,0	1/1:0,11:11:24.08:317,24,0	1/1:0,8:7:12.04:161,12,0	1/1:0,15:15:30.10:387,30,0	1/1:0,3:2:3.01:38,3,0	1/1:1,4:2:1.97:37,2,0	1/1:0,3:2:3.01:39,3,0	1/1:3,17:21:41.06:549,41,0	./.	1/1:3,17:21:41.66:584,42,0	1/1:3,23:26:63.20:821,63,0	1/1:0,2:2:6.02:82,6,0	1/1:1,12:13:17.15:259,17,0	1/1:1,13:14:39.10:509,39,0	1/1:1,12:13:36.07:457,36,0	1/1:0,2:2:6.02:77,6,0
chr10	27833164	.	GA	G	10570.48	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=0.815;DP=465;FS=1.927;HRun=9;HaplotypeScore=131.4240;InbreedingCoeff=0.9380;MQ=71.19;MQ0=1;MQRankSum=-6.511;QD=24.70;ReadPosRankSum=5.723;VQSLOD=3.3211;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,30:32:87.04:796,87,0	1/1:1,6:7:18.01:165,18,0	0/0:22,0:16:35.78:0,36,375	0/0:15,0:10:19.38:0,19,220	1/1:1,27:28:72.04:659,72,0	1/1:2,15:17:45.02:412,45,0	1/1:0,8:8:24.01:220,24,0	1/1:2,21:23:63.02:572,63,0	1/1:1,13:14:36.02:329,36,0	1/1:2,19:21:54.03:494,54,0	1/1:1,17:18:45.01:412,45,0	1/1:0,9:9:27.01:247,27,0	1/1:0,12:12:36.02:329,36,0	1/1:0,9:9:27.01:247,27,0	1/1:0,18:18:54.03:494,54,0	1/1:0,12:12:36.02:330,36,0	1/1:0,18:18:51.02:464,51,0	1/1:0,11:11:30.02:275,30,0	1/1:3,14:17:42:379,42,0	1/1:3,33:36:99:905,99,0	1/1:0,2:2:6:55,6,0	1/1:0,14:14:39.02:357,39,0	1/1:2,18:20:51.02:466,51,0	1/1:1,9:10:27.01:247,27,0	1/1:0,16:16:42.02:384,42,0	1/1:2,19:22:46.68:508,47,0	1/1:1,23:24:63.03:577,63,0	1/1:1,9:10:27.01:247,27,0
chr10	27834145	.	G	GAGGCATTCATCTTTT	9307.47	PASS	AB=0.667;AC=48;AF=0.960;AN=50;BaseQRankSum=-0.492;DP=116;FS=28.611;HRun=0;HaplotypeScore=124.6189;InbreedingCoeff=-0.1256;MQ=87.67;MQ0=0;MQRankSum=-3.308;QD=80.93;ReadPosRankSum=1.494;VQSLOD=2.5959;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,0:7:12.87:140,13,0	1/1:4,0:4:12.04:432,12,0	0/1:3,0:6:12.46:521,0,12	0/1:3,1:6:35.97:558,0,36	1/1:6,0:6:15.05:961,15,0	1/1:7,0:7:15.04:545,15,0	1/1:6,0:6:12.04:417,12,0	1/1:1,0:1:3.01:163,3,0	1/1:2,0:2:3.01:79,3,0	1/1:6,0:6:17.98:740,18,0	1/1:7,0:7:9.03:333,9,0	1/1:2,0:2:3.01:50,3,0	./.	1/1:2,0:2:5.98:138,6,0	1/1:5,0:5:12.04:498,12,0	1/1:2,0:2:6.02:213,6,0	1/1:3,0:3:5.98:122,6,0	./.	1/1:2,0:2:3.01:196,3,0	1/1:4,0:4:6.02:288,6,0	1/1:1,0:1:3.01:150,3,0	1/1:6,0:6:9.03:434,9,0	1/1:10,0:10:23.44:843,23,0	1/1:4,0:4:6.02:365,6,0	1/1:6,0:6:6.02:287,6,0	1/1:7,0:7:18.04:627,18,0	1/1:3,0:3:5.51:209,6,0	./.
chr10	27834898	.	G	GC	13738.64	PASS	AB=0.878;AC=54;AF=0.964;AN=56;BaseQRankSum=0.383;DP=393;FS=27.211;HRun=0;HaplotypeScore=100.8413;InbreedingCoeff=-0.0507;MQ=77.33;MQ0=0;MQRankSum=-6.104;QD=34.96;ReadPosRankSum=3.538;VQSLOD=3.1112;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,28:28:66.23:1052,66,0	1/1:0,8:8:18.06:287,18,0	0/1:14,0:16:46.70:47,0,183	0/1:11,0:13:30.45:36,0,30	1/1:1,8:9:18.06:287,18,0	1/1:0,19:19:48.16:765,48,0	1/1:1,25:26:66.22:1043,66,0	1/1:2,21:23:69.23:1079,69,0	1/1:1,12:13:27.09:431,27,0	1/1:0,14:14:39.13:622,39,0	1/1:1,10:11:30.10:478,30,0	1/1:0,21:21:45.15:716,45,0	1/1:1,9:10:21.07:325,21,0	1/1:2,13:15:24.08:382,24,0	1/1:0,12:12:27.09:430,27,0	1/1:2,13:15:24.08:383,24,0	1/1:0,10:10:24.51:356,25,0	1/1:0,3:3:9.03:144,9,0	1/1:2,12:14:33.11:527,33,0	1/1:1,15:16:45.15:717,45,0	1/1:1,22:23:45.15:717,45,0	1/1:0,15:15:39.13:622,39,0	1/1:1,12:13:36.12:570,36,0	1/1:1,5:6:6.02:96,6,0	1/1:0,14:15:36.12:573,36,0	1/1:2,15:17:45.15:717,45,0	1/1:2,5:7:18.06:286,18,0	1/1:0,1:1:3.01:48,3,0
chr10	27835124	.	AT	A	16028.86	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=6.126;DP=583;FS=1.324;HRun=5;HaplotypeScore=188.2807;InbreedingCoeff=0.9432;MQ=75.26;MQ0=0;MQRankSum=-9.950;QD=29.85;ReadPosRankSum=7.402;VQSLOD=2.0543;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,32:32:72.20:816,72,0	1/1:0,6:6:18.05:204,18,0	0/0:27,0:26:69.66:0,70,856	0/0:19,0:19:41.46:0,41,502	1/1:0,20:20:51.14:578,51,0	1/1:0,25:25:69.20:782,69,0	1/1:4,12:16:30.08:340,30,0	1/1:4,28:32:84.21:933,84,0	1/1:1,22:23:66.19:748,66,0	1/1:2,19:21:54.15:613,54,0	1/1:0,15:15:45.13:510,45,0	1/1:4,21:25:63.18:714,63,0	1/1:1,23:24:63.18:714,63,0	1/1:0,31:31:93.27:1054,93,0	1/1:1,24:25:72.20:816,72,0	1/1:0,27:27:78.22:884,78,0	1/1:3,20:23:57.16:646,57,0	1/1:0,12:12:24.07:272,24,0	1/1:0,20:20:57.16:645,57,0	1/1:3,20:23:60.17:680,60,0	1/1:1,18:19:33.09:374,33,0	1/1:0,12:11:33.09:374,33,0	1/1:0,24:24:69.20:782,69,0	1/1:2,14:16:39.11:442,39,0	1/1:0,15:15:42.59:476,43,0	1/1:1,18:19:54.15:612,54,0	1/1:1,28:29:84.24:952,84,0	1/1:1,2:3:6.02:68,6,0
chr10	27835314	.	GT	G	12083.56	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-3.868;DP=545;FS=0.548;HRun=7;HaplotypeScore=87.4936;InbreedingCoeff=0.9941;MQ=74.47;MQ0=0;MQRankSum=-3.519;QD=25.17;ReadPosRankSum=2.865;VQSLOD=5.3009;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,25:28:72.16:735,72,0	1/1:0,7:7:18.04:183,18,0	0/0:14,0:14:26.92:0,27,290	0/0:15,0:15:26.99:0,27,295	1/1:1,18:19:45.10:458,45,0	1/1:1,20:21:51.11:520,51,0	1/1:3,9:12:21.05:214,21,0	1/1:7,23:30:69.12:695,69,0	1/1:1,28:29:78.18:795,78,0	1/1:2,26:28:78.18:796,78,0	1/1:2,15:17:42.09:428,42,0	1/1:3,15:18:42.08:428,42,0	1/1:3,9:12:24.05:245,24,0	1/1:0,18:18:45.08:451,45,0	1/1:1,16:17:45.10:459,45,0	1/1:1,19:20:39.09:398,39,0	0/0:27,0:27:81.23:0,81,1003	0/0:9,0:9:21.07:0,21,264	1/1:2,15:17:45.08:452,45,0	1/1:3,27:30:75.16:765,75,0	1/1:3,15:18:42.09:429,42,0	1/1:1,21:22:57.13:581,57,0	1/1:1,11:12:31.21:308,31,0	1/1:4,17:21:45.10:459,45,0	1/1:1,25:26:69.16:704,69,0	1/1:2,19:21:57.11:574,57,0	1/1:1,24:25:66.15:673,66,0	1/1:1,11:12:33.07:337,33,0
chr10	27835575	.	G	GTT	17687.95	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=2.889;DP=529;FS=2.761;HRun=6;HaplotypeScore=218.7132;InbreedingCoeff=0.9528;MQ=54.88;MQ0=2;MQRankSum=-5.004;QD=40.20;ReadPosRankSum=3.130;VQSLOD=2.3038;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,11:13:24.04:374,24,0	1/1:3,2:5:9:122,9,0	0/0:27,0:25:35.76:0,36,391	0/0:24,0:20:12.45:0,12,230	1/1:10,25:35:87.10:1332,87,0	1/1:3,20:23:60.16:981,60,0	1/1:4,5:9:20.99:294,21,0	1/1:11,14:25:51.12:785,51,0	1/1:3,12:15:37.68:611,38,0	1/1:4,18:22:57.15:924,57,0	1/1:6,19:25:63.17:1024,63,0	1/1:3,11:14:33.11:557,33,0	1/1:6,10:16:42.07:636,42,0	1/1:5,20:26:63.42:1012,63,0	1/1:2,15:17:48.12:779,48,0	1/1:4,11:15:36.09:578,36,0	0/0:21,0:21:39.09:0,39,458	0/0:12,0:12:21.02:0,21,239	1/1:5,10:15:33.06:500,33,0	1/1:3,26:29:78.27:1315,78,0	1/1:1,5:6:9.03:151,9,0	1/1:1,14:15:42.14:709,42,0	1/1:4,13:17:48.10:741,48,0	1/1:4,4:8:14.92:218,15,0	1/1:4,26:30:84.20:1357,84,0	1/1:3,15:19:51:791,51,0	1/1:4,26:30:90.17:1453,90,0	1/1:2,9:11:30.03:443,30,0
chr10	27835597	.	ATTTC	A	4916.77	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=4.277;DP=547;FS=5.770;HRun=0;HaplotypeScore=291.0999;InbreedingCoeff=0.8854;MQ=57.13;MQ0=1;MQRankSum=-5.211;QD=9.91;ReadPosRankSum=5.998;VQSLOD=3.1999;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:16:24.10:100,24,0	1/1:8,0:8:21.43:88,21,0	0/0:23,0:21:44.91:0,45,790	0/0:27,0:23:43.29:0,43,591	1/1:33,0:33:66.96:274,67,0	1/1:24,0:24:56.14:230,56,0	1/1:13,0:13:16.07:66,16,0	1/1:21,0:21:42.77:174,43,0	1/1:21,0:21:52.98:215,53,0	1/1:21,0:21:45.45:185,45,0	1/1:23,0:23:58.84:240,59,0	1/1:13,0:13:32.14:132,32,0	1/1:20,0:20:50.89:208,51,0	1/1:24,0:24:53.57:220,54,0	1/1:22,0:22:47.92:196,48,0	1/1:15,0:15:34.88:143,35,0	1/1:4,16:20:27.09:493,27,0	1/1:0,12:12:21.07:384,21,0	1/1:13,0:13:24:99,24,0	1/1:30,0:30:44.36:229,44,0	1/1:7,0:7:2.68:11,3,0	1/1:19,0:19:40.22:165,40,0	1/1:15,0:15:33.96:136,34,0	1/1:11,0:11:13.29:55,13,0	1/1:32,0:32:77.57:318,78,0	1/1:24,0:24:53.30:216,53,0	1/1:32,0:30:72.31:296,72,0	1/1:7,0:7:12.48:47,12,0
chr10	27835601	.	CTTT	C	21440.34	PASS	AB=1.000;AC=50;AF=0.893;AN=56;BaseQRankSum=2.733;DP=522;FS=13.916;HRun=3;HaplotypeScore=202.8916;InbreedingCoeff=0.6242;MQ=59.55;MQ0=1;MQRankSum=-5.778;QD=45.42;ReadPosRankSum=6.452;VQSLOD=2.7881;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,15:17:30.02:517,30,0	1/1:0,8:8:24.08:446,24,0	0/0:24,0:23:52.42:0,52,996	0/0:26,0:22:29.59:0,30,627	1/1:0,29:29:75.26:1389,75,0	1/1:0,23:23:66.23:1208,66,0	1/1:0,12:12:26.89:388,27,0	1/1:1,22:23:57.17:980,57,0	1/1:0,21:21:63.22:1148,63,0	1/1:0,19:19:54.13:965,54,0	1/1:0,23:23:66.23:1221,66,0	1/1:0,12:12:36.12:668,36,0	1/1:0,21:21:60.14:1075,60,0	1/1:0,22:22:60.21:1113,60,0	1/1:0,21:21:57.19:1038,57,0	1/1:0,16:16:39.13:724,39,0	0/1:19,0:19:8.78:112,0,9	0/1:14,0:14:8.55:86,0,9	1/1:0,12:12:33.09:563,33,0	1/1:1,24:25:60.18:1278,60,0	1/1:1,4:5:5.95:74,6,0	1/1:0,17:17:48.15:859,48,0	1/1:0,16:16:39.13:716,39,0	1/1:1,10:11:18.06:317,18,0	1/1:0,31:31:90.31:1653,90,0	1/1:0,22:22:63.16:1130,63,0	1/1:0,28:28:81.28:1505,81,0	1/1:0,5:5:15.05:270,15,0
chr10	27835818	.	AT	A	16697.08	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-4.810;DP=624;FS=4.335;HRun=6;HaplotypeScore=71.8239;InbreedingCoeff=0.9457;MQ=72.03;MQ0=0;MQRankSum=-7.595;QD=27.83;ReadPosRankSum=3.888;VQSLOD=5.5388;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,33:33:90.22:965,90,0	1/1:2,8:10:24.06:258,24,0	0/0:11,0:11:24.04:0,24,285	0/0:13,0:12:36.11:0,36,452	1/1:2,38:40:99:1087,102,0	1/1:2,37:39:96.23:1032,96,0	1/1:3,15:18:39.10:419,39,0	1/1:2,18:20:54.13:580,54,0	1/1:0,24:24:63.16:677,63,0	1/1:1,21:22:63.16:677,63,0	1/1:0,23:23:57.14:613,57,0	1/1:0,19:19:57.14:613,57,0	1/1:2,25:27:69.17:741,69,0	1/1:2,21:23:63.16:676,63,0	1/1:1,30:31:69.17:742,69,0	1/1:2,18:20:54.14:580,54,0	1/1:13,5:18:33.07:344,33,0	1/1:4,0:4:6.01:64,6,0	1/1:2,14:16:42.10:451,42,0	1/1:5,26:31:72.17:771,72,0	1/1:0,24:24:66.17:709,66,0	1/1:0,27:27:72.17:768,72,0	1/1:0,20:20:57.14:613,57,0	1/1:0,21:21:54.14:580,54,0	1/1:1,32:33:90.23:967,90,0	1/1:1,27:28:81.20:869,81,0	1/1:0,20:20:57.14:612,57,0	1/1:0,9:9:27.07:290,27,0
chr10	27835829	.	T	TA	602.26	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-0.566;DP=642;FS=0.896;HRun=4;HaplotypeScore=128.8705;InbreedingCoeff=0.9890;MQ=75.01;MQ0=0;MQRankSum=-1.749;QD=25.09;ReadPosRankSum=0.165;VQSLOD=2.0903;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:75.17:0,75,828	0/0:8,0:8:21.06:0,21,238	0/0:15,0:14:39.10:0,39,435	0/0:16,0:15:39.10:0,39,434	0/0:40,0:40:99:0,111,1246	0/0:39,0:39:99:0,108,1200	0/0:15,0:15:42.12:0,42,476	0/0:29,0:29:78.21:0,78,876	0/0:22,0:22:57.16:0,57,646	0/0:21,0:21:60.17:0,60,681	0/0:25,0:25:69.18:0,69,773	0/0:22,0:22:63.18:0,63,714	0/0:26,0:26:75.17:0,75,828	0/0:22,0:22:57.16:0,57,646	0/0:32,0:32:75.21:0,75,849	0/0:23,0:22:63.16:0,63,703	1/1:12,6:18:39.13:523,39,0	1/1:3,3:6:15.05:198,15,0	0/0:17,0:17:51.14:0,51,575	0/0:26,0:26:69.18:0,69,772	0/0:24,0:24:63.18:0,63,715	0/0:25,0:25:72.21:0,72,816	0/0:26,0:26:62.83:0,63,703	0/0:21,0:21:57.16:0,57,646	0/0:32,0:31:81.23:0,81,914	0/0:27,0:27:72.21:0,72,816	0/0:23,0:22:66.16:0,66,735	0/0:10,0:10:26.91:0,27,304
chr10	27836213	.	AT	A	611.88	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=6.692;DP=598;FS=0.000;HRun=6;HaplotypeScore=68.8964;InbreedingCoeff=0.8250;MQ=65.73;MQ0=0;MQRankSum=-5.969;QD=19.74;ReadPosRankSum=-1.478;VQSLOD=2.8436;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,132,1735	0/0:5,0:5:15.05:0,15,197	0/0:4,0:4:5.63:0,6,30	0/1:5,0:6:0.09:0,0,17	0/0:31,0:31:87.27:0,87,1128	0/0:38,0:37:99:0,105,1338	0/0:22,0:22:63.20:0,63,824	0/0:22,0:22:57.18:0,57,729	0/0:23,0:23:60.19:0,60,787	0/0:22,0:22:63.20:0,63,809	0/0:18,0:18:48.15:0,48,616	0/0:16,0:16:48.16:0,48,632	0/0:36,0:36:99:0,99,1298	0/0:25,0:25:72.23:0,72,945	0/0:37,0:37:99:0,108,1394	0/0:21,0:21:60.19:0,60,783	1/1:3,16:19:51.10:538,51,0	1/1:0,6:6:18.05:193,18,0	0/0:14,0:14:36.12:0,36,469	0/0:27,0:27:75.24:0,75,982	0/0:14,0:14:39.13:0,39,513	0/0:23,0:23:61.41:0,61,762	0/0:21,0:21:63.19:0,63,797	0/0:17,0:17:51.15:0,51,652	0/0:19,0:19:54.16:0,54,690	0/0:22,0:22:60.19:0,60,783	0/0:30,0:30:78.25:0,78,1026	0/0:14,0:14:42.14:0,42,545
chr10	27836248	.	G	GA	890.92	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=0.270;DP=637;FS=6.859;HRun=1;HaplotypeScore=93.8235;InbreedingCoeff=0.9968;MQ=81.09;MQ0=0;MQRankSum=-5.452;QD=30.72;ReadPosRankSum=-0.376;VQSLOD=2.7781;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,111,1424	0/0:7,0:7:21.07:0,21,273	0/0:16,0:15:45.12:0,45,559	0/0:23,0:23:68.70:0,69,850	0/0:32,0:32:93.29:0,93,1192	0/0:33,0:33:96.30:0,96,1231	0/0:20,0:20:60.19:0,60,778	0/0:24,0:24:60.19:0,60,766	0/0:27,0:27:75.24:0,75,972	0/0:26,0:26:75.23:0,75,958	0/0:20,0:20:60.18:0,60,765	0/0:21,0:21:63.20:0,63,816	0/0:33,0:33:96.28:0,96,1211	0/0:21,0:21:63.20:0,63,818	0/0:35,0:35:96.31:0,96,1245	0/0:17,0:17:51.17:0,51,662	1/1:2,16:18:42.13:608,42,0	1/1:1,10:11:27.09:404,27,0	0/0:16,0:16:45.12:0,45,567	0/0:24,0:24:66.21:0,66,857	0/0:18,0:18:54.18:0,54,701	0/0:23,0:23:66.20:0,66,843	0/0:22,0:22:63.20:0,63,816	0/0:27,0:27:78.16:0,78,961	0/0:20,0:20:60.19:0,60,777	0/0:27,0:27:81.26:0,81,1041	0/0:30,0:30:90.29:0,90,1168	0/0:9,0:9:27.09:0,27,350
chr10	27837224	.	TACAC	T	4375.59	PASS	AB=0.736;AC=41;AF=0.788;AN=52;BaseQRankSum=-0.773;DP=534;FS=5.828;HRun=0;HaplotypeScore=92.5888;InbreedingCoeff=-0.0515;MQ=57.15;MQ0=38;MQRankSum=0.250;QD=9.92;ReadPosRankSum=-2.511;VQSLOD=3.0869;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:20,3:22:3.79:228,0,4	1/1:4,1:5:3.01:47,3,0	./.	./.	0/1:9,7:16:9.90:41,0,10	0/1:8,9:15:11.75:85,0,12	1/1:9,6:15:6.02:94,6,0	1/1:30,0:29:14.32:88,14,0	1/1:5,9:13:18.06:283,18,0	0/1:10,6:17:6.92:210,0,7	1/1:9,12:20:12.03:169,12,0	1/1:10,11:21:24.01:378,24,0	1/1:15,3:19:16.69:220,17,0	1/1:11,8:19:15.05:236,15,0	1/1:8,4:10:8.90:142,9,0	1/1:10,11:21:21.06:305,21,0	0/1:15,1:25:30.97:31,0,51	0/0:12,1:23:19.34:0,19,116	1/1:9,5:14:6.26:225,6,0	0/1:6,10:17:3.85:262,0,4	0/1:20,2:21:40.98:91,0,41	1/1:13,3:17:9.03:142,9,0	0/1:9,3:12:21.91:39,0,22	0/1:8,8:17:2.84:243,0,3	1/1:6,8:15:21.06:311,21,0	1/1:9,7:16:14.54:146,15,0	1/1:18,8:28:17.19:311,17,0	1/1:0,4:4:3.01:47,3,0
chr10	27837595	.	TAG	T	1513.22	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.203;DP=704;FS=7.454;HRun=0;HaplotypeScore=80.8286;InbreedingCoeff=0.9480;MQ=89.79;MQ0=0;MQRankSum=-2.590;QD=39.82;ReadPosRankSum=0.629;VQSLOD=4.8319;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,99,1843	0/0:10,0:10:27.09:0,27,505	0/0:28,0:29:74.92:0,75,1503	0/0:33,0:33:95.53:0,96,1646	0/0:27,0:27:75.25:0,75,1405	0/0:25,0:25:63.22:0,63,1173	0/0:32,0:32:93.32:0,93,1727	0/0:27,0:27:78.26:0,78,1432	0/0:29,0:29:87.28:0,87,1597	0/0:40,0:40:99:0,108,1955	0/0:25,0:25:72.25:0,72,1322	0/0:22,0:22:63.20:0,63,1149	0/0:28,0:28:84.27:0,84,1526	0/0:36,0:36:99:0,105,1918	0/0:24,0:24:72.25:0,72,1349	0/0:28,0:28:84.29:0,84,1567	1/1:0,20:20:60.20:884,60,0	1/1:0,18:18:51.17:751,51,0	0/0:19,0:19:54.19:0,54,1009	0/0:26,0:26:78.27:0,78,1448	0/0:20,0:20:57.20:0,57,1068	0/0:29,0:29:78.25:0,78,1422	0/0:17,0:17:51.16:0,51,895	0/0:28,0:28:84.29:0,84,1573	0/0:22,0:22:66.23:0,66,1225	0/0:19,0:19:57.20:0,57,1068	0/0:34,0:34:99:0,102,1879	0/0:2,0:2:6.02:0,6,112
chr10	27838406	.	TC	T	1309.29	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.264;DP=657;FS=0.000;HRun=1;HaplotypeScore=65.5838;InbreedingCoeff=0.9978;MQ=80.56;MQ0=0;MQRankSum=-1.889;QD=31.17;ReadPosRankSum=-0.260;VQSLOD=3.1192;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,99,1335	0/0:14,0:14:42.14:0,42,585	0/0:30,0:30:87.07:0,87,1033	0/0:26,0:25:73.90:0,74,858	0/0:29,0:29:83.97:0,84,1113	0/0:32,0:32:93.26:0,93,1245	0/0:17,0:17:51.16:0,51,691	0/0:30,0:30:84.18:0,84,1092	0/0:21,0:21:63.20:0,63,855	0/0:28,0:28:84.27:0,84,1156	0/0:26,0:26:71.76:0,72,959	0/0:19,0:19:54.10:0,54,701	0/0:28,0:28:81.18:0,81,1071	0/0:26,0:26:78.13:0,78,1023	0/0:29,0:29:87.24:0,87,1146	0/0:30,0:30:90.29:0,90,1238	1/1:2,25:27:69.09:912,69,0	1/1:5,10:15:42.03:519,42,0	0/0:19,0:19:57.15:0,57,733	0/0:22,0:22:65.76:0,66,831	0/0:20,0:20:60.18:0,60,817	0/0:29,0:29:86.62:0,87,1135	0/0:20,0:20:54.17:0,54,753	0/0:17,0:17:51.15:0,51,692	0/0:12,0:12:36.11:0,36,481	0/0:25,0:25:72.22:0,72,976	0/0:25,0:25:75.09:0,75,914	0/0:7,0:7:21.05:0,21,274
chr10	27838666	.	A	ACACT	36376.42	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-8.871;DP=607;FS=0.643;HRun=0;HaplotypeScore=77.9952;InbreedingCoeff=0.9147;MQ=83.18;MQ0=0;MQRankSum=-10.233;QD=64.38;ReadPosRankSum=5.805;VQSLOD=6.8895;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,25:25:63.21:1623,63,0	1/1:0,12:12:33.11:860,33,0	0/0:21,0:21:63.14:0,63,1125	0/0:21,0:21:50.33:0,50,832	1/1:2,28:34:84.29:2257,84,0	1/1:0,31:33:81.28:2169,81,0	1/1:2,17:22:39.13:985,39,0	1/1:1,33:40:99:2671,117,0	1/1:0,19:23:54.18:1434,54,0	1/1:0,23:24:72.23:1894,72,0	1/1:1,25:28:63.22:1704,63,0	1/1:1,20:22:48.16:1312,48,0	1/1:1,14:16:42.14:1130,42,0	1/1:0,16:17:48.16:1268,48,0	1/1:1,20:23:51.17:1395,51,0	1/1:2,20:24:48.16:1311,48,0	1/1:6,21:27:69.21:1794,69,0	1/1:5,6:11:24.05:571,24,0	1/1:0,14:17:51.15:1318,51,0	1/1:1,22:23:60.21:1613,60,0	1/1:1,11:14:30.10:809,30,0	1/1:1,19:21:60.21:1598,60,0	1/1:1,21:23:48.16:1178,48,0	1/1:0,11:12:27.09:739,27,0	1/1:0,12:13:33.11:902,33,0	1/1:0,24:24:69.22:1793,69,0	1/1:1,32:34:72.25:1967,72,0	1/1:0,3:3:3.01:82,3,0
chr10	27838722	.	T	TA	929.70	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=-3.784;DP=471;FS=6.971;HRun=8;HaplotypeScore=81.2857;InbreedingCoeff=0.7175;MQ=61.29;MQ0=0;MQRankSum=1.363;QD=20.21;ReadPosRankSum=1.764;VQSLOD=3.5756;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:54.35:0,54,470	0/0:13,0:13:36.02:0,36,330	0/0:2,0:2:2.68:0,3,11	0/1:7,0:5:0.85:1,0,16	0/0:30,0:30:59.05:0,59,531	0/0:28,0:28:60.02:0,60,549	0/0:24,0:24:54:0,54,488	0/0:24,0:24:60.02:0,60,549	0/0:15,0:15:33.01:0,33,299	0/0:19,0:18:41.99:0,42,377	0/0:23,0:23:59.88:0,60,527	0/0:12,0:12:30.02:0,30,275	0/0:16,0:16:48.01:0,48,435	0/0:19,0:19:51.01:0,51,462	0/0:20,0:20:45.01:0,45,407	0/0:17,0:17:42.02:0,42,384	1/1:7,19:26:60.14:669,60,0	1/1:1,12:13:33.10:381,33,0	0/0:21,0:22:56.06:0,56,500	0/0:13,0:13:36:0,36,325	0/0:10,0:10:20.96:0,21,184	0/0:12,0:12:24.01:0,24,220	0/0:11,0:11:11.19:0,11,108	0/0:14,0:14:33.02:0,33,302	0/0:6,0:6:15.01:0,15,137	0/0:24,0:24:57.01:0,57,516	0/0:26,1:26:10.40:0,10,350	0/0:2,0:2:3:0,3,27
chr10	27839057	.	GA	G	7880.08	PASS	AB=0.535;AC=47;AF=0.839;AN=56;BaseQRankSum=-3.573;DP=479;FS=21.031;HRun=10;HaplotypeScore=84.2568;InbreedingCoeff=0.8275;MQ=61.72;MQ0=3;MQRankSum=0.139;QD=19.51;ReadPosRankSum=1.955;VQSLOD=3.9218;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,26:31:70.05:585,70,0	1/1:0,8:8:24:208,24,0	0/0:12,0:6:13.38:0,13,120	0/0:5,0:4:11.39:0,11,102	1/1:3,20:24:56.01:474,56,0	1/1:2,12:14:2.81:253,3,0	1/1:1,14:15:32.99:286,33,0	1/1:5,18:23:52.96:434,53,0	1/1:1,9:10:21:182,21,0	1/1:6,18:24:50.94:436,51,0	1/1:3,14:18:35.01:292,35,0	1/1:1,8:9:17.99:156,18,0	1/1:2,10:12:20.99:182,21,0	1/1:1,11:12:26.99:234,27,0	1/1:1,14:15:41.99:365,42,0	1/1:3,10:13:29.99:260,30,0	0/0:5,0:30:65.52:0,66,337	0/0:13,0:27:60.79:0,61,400	1/1:6,17:21:50.95:437,51,0	1/1:5,20:23:50.82:441,51,0	1/1:0,10:10:26.99:234,27,0	1/1:1,13:15:35.03:292,35,0	1/1:1,13:14:32.99:287,33,0	0/1:3,20:23:6.37:409,0,6	1/1:0,15:15:44.99:391,45,0	1/1:4,19:23:53.97:468,54,0	1/1:3,15:18:41.98:364,42,0	1/1:0,9:9:23.99:208,24,0
chr10	27839449	.	A	ATT	1227.24	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=2.108;DP=583;FS=1.694;HRun=2;HaplotypeScore=68.5810;InbreedingCoeff=0.9822;MQ=82.03;MQ0=0;MQRankSum=-2.449;QD=43.83;ReadPosRankSum=2.619;VQSLOD=3.6872;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:57.17:0,57,817	0/0:10,0:10:30.09:0,30,422	0/0:21,0:21:60.13:0,60,793	0/0:12,0:12:30.08:0,30,401	0/0:39,0:39:99:0,111,1570	0/0:28,0:28:81.26:0,81,1170	0/0:21,0:21:54.17:0,54,776	0/0:28,0:28:81.26:0,81,1157	0/0:17,0:17:45.14:0,45,642	0/0:29,0:29:84.27:0,84,1202	0/0:15,0:15:42.11:0,42,579	0/0:17,0:17:51.14:0,51,711	0/0:20,0:20:57.18:0,57,818	0/0:24,0:24:69.20:0,69,973	0/0:23,0:23:69.23:0,69,1015	0/0:17,0:17:51.17:0,51,748	1/1:1,16:18:45.15:843,45,0	1/1:0,10:10:27.09:506,27,0	0/0:8,0:8:24.08:0,24,353	0/0:33,0:33:93.30:0,93,1348	0/0:14,0:14:39.13:0,39,574	0/0:25,0:25:75.19:0,75,1023	0/0:31,0:31:90.29:0,90,1301	0/0:14,0:14:42.14:0,42,615	0/0:29,0:29:84.26:0,84,1196	0/0:20,0:20:60.20:0,60,867	0/0:36,0:36:99:0,102,1455	0/0:5,0:5:12.04:0,12,176
chr10	27839679	.	C	CT	15333.41	PASS	AB=1.000;AC=49;AF=0.875;AN=56;BaseQRankSum=-6.544;DP=628;FS=6.669;HRun=7;HaplotypeScore=90.8377;InbreedingCoeff=0.7230;MQ=76.52;MQ0=2;MQRankSum=-3.411;QD=26.71;ReadPosRankSum=3.579;VQSLOD=5.3236;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,27:34:54.15:638,54,0	1/1:3,10:13:33.09:390,33,0	0/0:30,0:24:2.56:0,3,283	0/1:24,0:20:12.31:12,0,253	1/1:7,37:44:99:1284,111,0	1/1:0,23:23:57.17:689,57,0	1/1:5,18:23:33.10:399,33,0	1/1:4,25:29:75.17:867,75,0	1/1:1,20:21:54.03:652,54,0	1/1:3,26:29:78.24:942,78,0	1/1:1,30:31:84.21:995,84,0	1/1:1,22:23:51.16:616,51,0	1/1:1,16:17:39.12:471,39,0	1/1:3,21:24:51.16:616,51,0	1/1:4,24:28:66.20:797,66,0	1/1:0,15:15:33.10:399,33,0	0/0:21,0:21:60.09:0,60,579	0/0:3,0:3:6.01:0,6,58	1/1:5,11:16:36.08:404,36,0	1/1:2,28:30:84.13:961,84,0	1/1:1,15:16:36.11:435,36,0	1/1:1,16:17:48.11:563,48,0	1/1:5,20:25:55.41:656,55,0	1/1:1,17:18:48.15:580,48,0	1/1:1,15:16:42.13:507,42,0	1/1:4,22:26:66.16:771,66,0	1/1:8,18:26:48.15:580,48,0	1/1:2,4:6:9.03:109,9,0
chr10	27841275	.	GA	G	160.47	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=4.658;DP=462;FS=15.495;HRun=9;HaplotypeScore=47.6133;InbreedingCoeff=0.9244;MQ=78.74;MQ0=0;MQRankSum=-2.847;QD=11.46;ReadPosRankSum=0.085;VQSLOD=0.9647;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:15:38.95:0,39,430	0/0:7,0:7:21.06:0,21,242	0/0:15,1:15:10.51:0,11,295	0/0:11,0:11:12.69:0,13,174	0/0:28,0:28:72.20:0,72,823	0/0:19,0:19:54.14:0,54,611	0/0:17,0:17:17.69:0,18,457	0/0:30,0:30:75.22:0,75,865	0/0:13,0:13:33.10:0,33,381	0/0:24,0:24:63.18:0,63,719	0/0:29,0:29:87.24:0,87,993	0/0:14,0:14:36.11:0,36,415	0/0:18,0:18:54.14:0,54,612	0/0:11,0:11:30.09:0,30,346	0/0:15,0:15:42.12:0,42,485	0/0:17,0:17:48.14:0,48,554	1/1:1,7:8:18:165,18,0	1/1:1,5:6:12:110,12,0	0/0:17,0:17:42.04:0,42,466	0/0:36,0:36:96.26:0,96,1087	0/0:8,0:8:18.03:0,18,195	0/0:10,0:10:27.08:0,27,312	0/0:11,0:11:24.07:0,24,277	0/0:10,0:10:27.08:0,27,311	0/0:17,0:17:51.15:0,51,589	0/0:19,1:20:26.69:0,27,561	0/0:30,0:30:78.22:0,78,889	0/0:5,0:5:15.04:0,15,173
chr10	27841308	.	GATA	G	526.78	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.266;DP=483;FS=2.056;HRun=0;HaplotypeScore=65.5294;InbreedingCoeff=0.8489;MQ=69.43;MQ0=0;MQRankSum=-5.593;QD=26.34;ReadPosRankSum=0.039;VQSLOD=3.6108;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:21.06:0,21,394	0/0:9,0:9:27.09:0,27,563	0/0:12,0:11:21.06:0,21,378	0/0:7,0:8:14.06:0,14,218	0/0:24,0:24:66.23:0,66,1375	0/0:24,0:24:63.22:0,63,1302	0/0:16,0:16:42.14:0,42,873	0/0:26,0:26:54.19:0,54,1118	0/0:17,0:17:45.15:0,45,938	0/0:20,0:20:48.16:0,48,1001	0/0:35,0:35:93.32:0,93,1934	0/0:16,0:16:42.14:0,42,860	0/0:16,0:16:42.14:0,42,868	0/0:20,0:20:60.21:0,60,1249	0/0:18,0:18:45.15:0,45,938	0/0:21,0:21:57.18:0,57,1135	1/1:3,4:7:12:153,12,0	1/1:2,11:13:33.11:489,33,0	0/0:17,1:18:0.62:0,1,798	0/0:33,0:33:81.28:0,81,1688	0/0:9,0:9:24.08:0,24,500	0/0:10,0:10:24.08:0,24,484	0/0:17,0:17:48.16:0,48,1001	0/0:8,0:8:21.07:0,21,437	0/0:13,0:13:33.10:0,33,650	0/0:21,0:21:60.20:0,60,1215	0/0:36,0:36:98.36:0,98,2119	0/0:6,0:6:15.05:0,15,313
chr10	27841602	.	GA	G	15714.70	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=0.522;DP=547;FS=0.733;HRun=5;HaplotypeScore=77.2564;InbreedingCoeff=0.9821;MQ=76.58;MQ0=0;MQRankSum=-8.136;QD=30.45;ReadPosRankSum=4.068;VQSLOD=5.3636;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,10:10:30.02:324,30,0	1/1:0,6:6:12.03:136,12,0	0/0:17,0:17:39.10:0,39,488	0/0:14,0:14:42.14:0,42,557	1/1:2,37:39:99:1217,111,0	1/1:0,25:25:72.21:816,72,0	1/1:0,17:17:45.13:510,45,0	1/1:1,32:33:96.26:1079,96,0	1/1:0,20:20:54.15:612,54,0	1/1:2,27:29:81.18:896,81,0	1/1:1,17:18:51.15:578,51,0	1/1:1,19:20:48.07:528,48,0	1/1:0,14:14:42.12:476,42,0	1/1:2,16:18:51.06:548,51,0	1/1:0,23:23:66.19:748,66,0	1/1:2,19:21:39.11:442,39,0	1/1:2,16:18:48.13:543,48,0	1/1:0,15:15:42.12:476,42,0	1/1:0,33:33:99:1068,99,0	1/1:2,32:34:93.20:1028,93,0	1/1:3,11:14:30.08:340,30,0	1/1:0,9:9:26.99:289,27,0	1/1:1,19:20:48.11:544,48,0	1/1:0,12:12:36.10:408,36,0	1/1:3,17:20:51.14:578,51,0	1/1:1,20:21:60.17:680,60,0	1/1:0,19:19:51.15:578,51,0	1/1:0,8:8:24.07:272,24,0
chr10	27842685	.	A	ATAG	35538.41	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-4.936;DP=632;FS=5.417;HRun=0;HaplotypeScore=122.9337;InbreedingCoeff=0.9968;MQ=89.66;MQ0=0;MQRankSum=-10.514;QD=65.45;ReadPosRankSum=4.703;VQSLOD=6.2244;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,20:21:60.21:1477,60,0	1/1:1,8:10:24.03:591,24,0	0/0:36,0:36:99:0,102,1839	0/0:18,0:18:48.16:0,48,850	1/1:1,33:36:90.25:2144,90,0	1/1:1,26:29:78.27:1913,78,0	1/1:0,22:24:63.22:1549,63,0	1/1:2,18:26:72.17:1478,72,0	1/1:0,11:12:36.12:870,36,0	1/1:0,25:25:75.26:1845,75,0	1/1:1,23:24:66.22:1625,66,0	1/1:0,23:23:69.24:1693,69,0	1/1:0,33:38:96.33:2340,96,0	1/1:0,29:30:84.29:2066,84,0	1/1:1,24:25:69.24:1698,69,0	1/1:0,20:24:60.21:1475,60,0	0/0:24,0:24:72.23:0,72,1305	0/0:11,0:11:30.10:0,30,559	1/1:0,12:13:39.11:907,39,0	1/1:0,30:32:84.28:2029,84,0	1/1:1,15:16:33.11:793,33,0	1/1:1,11:14:33.11:799,33,0	1/1:0,19:20:57.20:1396,57,0	1/1:1,13:14:36.12:881,36,0	1/1:0,28:29:84.29:2052,84,0	1/1:0,24:25:74.99:1785,75,0	1/1:1,24:25:69.24:1697,69,0	1/1:0,7:8:18.06:438,18,0
chr10	27843171	.	G	GTTAT	4394.76	PASS	AC=44;AF=0.917;AN=48;BaseQRankSum=-3.165;DP=241;FS=4.712;HRun=0;HaplotypeScore=36.8070;InbreedingCoeff=0.3966;MQ=66.21;MQ0=3;MQRankSum=-1.721;QD=20.16;ReadPosRankSum=-0.616;VQSLOD=3.8362;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,6:9:12.04:282,12,0	1/1:1,2:3:6.02:141,6,0	./.	./.	1/1:6,3:9:9.03:180,9,0	0/0:11,0:11:23.82:0,24,338	0/0:3,0:3:7.25:0,7,75	1/1:44,0:44:30.07:533,30,0	./.	1/1:6,3:9:9.03:208,9,0	1/1:4,2:6:6.02:141,6,0	1/1:5,0:5:3.01:71,3,0	1/1:4,2:6:6.02:141,6,0	1/1:4,2:6:3.01:71,3,0	1/1:5,8:13:18.06:424,18,0	1/1:2,3:5:6.02:141,6,0	1/1:15,0:20:15.03:235,15,0	1/1:4,4:7:12.04:283,12,0	1/1:11,5:15:18.06:401,18,0	1/1:5,3:8:9.03:212,9,0	./.	1/1:1,1:2:3.01:71,3,0	1/1:7,1:8:3.01:71,3,0	1/1:3,0:3:3.01:58,3,0	1/1:7,7:14:15.05:353,15,0	1/1:4,3:7:9.03:212,9,0	1/1:7,0:7:3:25,3,0	1/1:3,6:9:6.02:141,6,0
chr10	27843263	.	TC	T	461.82	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.622;DP=423;FS=31.259;HRun=2;HaplotypeScore=40.7789;InbreedingCoeff=0.9866;MQ=90.98;MQ0=0;MQRankSum=-2.245;QD=27.17;ReadPosRankSum=0.080;VQSLOD=1.5112;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:48.16:0,48,718	0/0:8,0:8:24.08:0,24,360	0/0:16,0:16:48.15:0,48,698	0/0:17,0:17:38.23:0,38,585	0/0:23,0:23:66.22:0,66,988	0/0:18,0:18:54.17:0,54,789	0/0:12,0:12:33.11:0,33,493	0/0:30,0:30:90.27:0,90,1277	0/0:8,0:8:24.08:0,24,359	0/0:11,0:11:33.09:0,33,456	0/0:14,0:14:42.14:0,42,628	0/0:13,0:13:39.13:0,39,576	0/0:18,0:18:54.18:0,54,805	0/0:21,0:21:60.20:0,60,899	0/0:16,0:16:45.15:0,45,674	0/0:18,0:18:51.17:0,51,764	1/1:0,10:10:27.09:348,27,0	1/1:0,7:7:18.06:234,18,0	0/0:21,0:21:63.19:0,63,907	0/0:21,0:21:63.21:0,63,944	0/0:6,0:6:18.06:0,18,270	0/0:14,0:14:42.13:0,42,611	0/0:13,0:13:39.13:0,39,584	0/0:13,0:13:39.13:0,39,583	0/0:17,0:17:51.17:0,51,764	0/0:18,0:18:54.18:0,54,804	0/0:15,0:15:45.15:0,45,670	0/0:9,0:9:21.07:0,21,315
chr10	27843560	.	A	AT	805.89	PASS	AB=0.600;AC=3;AF=0.054;AN=56;BaseQRankSum=-4.194;DP=601;FS=0.000;HRun=8;HaplotypeScore=56.5473;InbreedingCoeff=0.7758;MQ=81.37;MQ0=0;MQRankSum=-4.075;QD=23.03;ReadPosRankSum=-0.974;VQSLOD=3.6449;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:63.02:0,63,576	0/0:6,0:6:18.01:0,18,165	0/0:19,0:19:44.70:0,45,395	0/0:15,0:15:32.85:0,33,288	0/0:24,0:24:69.04:0,69,631	0/0:22,0:22:57.03:0,57,522	0/0:18,0:18:51.01:0,51,462	0/0:24,0:24:60.02:0,60,549	0/0:31,0:31:87.03:0,87,791	0/0:19,0:19:51.02:0,51,467	0/0:26,0:26:78.04:0,78,714	0/0:14,0:14:36.02:0,36,330	0/0:24,0:25:65.07:0,65,583	0/0:18,0:18:48.02:0,48,439	0/0:25,0:25:66.01:0,66,599	0/0:26,0:25:72:0,72,652	1/1:2,21:23:47.85:694,48,0	0/1:4,8:12:3.39:218,0,3	0/0:19,0:19:45:0,45,406	0/0:22,0:22:63.03:0,63,577	0/0:22,0:22:57.02:0,57,522	0/0:20,0:20:57.01:0,57,516	0/0:29,0:29:78.03:0,78,714	0/0:19,0:19:54.03:0,54,494	0/0:21,0:21:60.03:0,60,549	0/0:29,0:29:78.04:0,78,714	0/0:32,0:32:90.01:0,90,812	0/0:16,0:17:50.06:0,50,445
chr10	27845102	.	GA	G	19556.22	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=5.250;DP=756;FS=0.476;HRun=6;HaplotypeScore=76.7983;InbreedingCoeff=0.9974;MQ=85.12;MQ0=0;MQRankSum=-7.055;QD=28.76;ReadPosRankSum=4.929;VQSLOD=5.2159;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,25:28:63.16:677,63,0	1/1:1,9:10:27.07:290,27,0	0/0:27,0:27:75.23:0,75,949	0/0:20,0:20:37.11:0,37,481	1/1:2,32:34:93.23:1000,93,0	1/1:0,23:23:69.17:742,69,0	1/1:3,22:25:57.14:612,57,0	1/1:2,32:34:96.24:1032,96,0	1/1:0,30:30:87.22:935,87,0	1/1:3,37:40:99:1177,111,0	1/1:1,14:15:42.11:451,42,0	1/1:0,31:31:87.22:935,87,0	1/1:0,33:33:93.23:999,93,0	1/1:1,32:33:87.22:935,87,0	1/1:1,31:32:90.23:967,90,0	1/1:2,37:39:99:1064,99,0	0/0:22,0:22:63.18:0,63,810	0/0:7,0:7:18.05:0,18,224	1/1:2,23:25:69.15:730,69,0	1/1:0,36:36:96.23:1032,96,0	1/1:3,29:32:87.22:935,87,0	1/1:2,34:36:99:1064,99,0	1/1:6,21:27:47.90:516,48,0	1/1:0,22:22:66.17:709,66,0	1/1:2,19:21:54.14:580,54,0	1/1:2,32:34:96.20:1011,96,0	1/1:3,24:27:69.17:741,69,0	1/1:0,13:13:39.10:419,39,0
chr10	27845411	.	A	AT	1773.98	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-3.480;DP=681;FS=10.656;HRun=0;HaplotypeScore=65.0733;InbreedingCoeff=0.9866;MQ=64.44;MQ0=0;MQRankSum=1.476;QD=37.74;ReadPosRankSum=1.292;VQSLOD=3.1234;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:93.20:0,93,1220	0/0:7,0:7:18.06:0,18,251	0/0:13,0:13:32.25:0,32,443	0/0:6,0:6:15.05:0,15,210	0/0:41,0:41:99:0,105,1408	0/0:25,0:25:69.17:0,69,907	0/0:23,0:23:69.13:0,69,888	0/0:45,0:45:99:0,126,1614	0/0:24,0:24:72.17:0,72,948	0/0:29,0:29:87.25:0,87,1152	0/0:23,0:23:63.17:0,63,839	0/0:26,0:26:75.20:0,75,1007	0/0:26,0:26:78.13:0,78,1008	0/0:21,0:21:60.19:0,60,820	0/0:21,0:21:63.14:0,63,813	0/0:21,0:21:63.20:0,63,864	1/1:0,23:23:63.21:941,63,0	1/1:0,24:24:66.17:954,66,0	0/0:14,0:14:42.13:0,42,571	0/0:31,0:31:93.10:0,93,1165	0/0:26,0:26:75.24:0,75,1029	0/0:29,0:29:87.20:0,87,1129	0/0:32,0:32:90.18:0,90,1134	0/0:28,0:28:81.14:0,81,1050	0/0:24,0:24:45.15:0,45,627	0/0:28,0:28:84.25:0,84,1129	0/0:31,0:31:93.20:0,93,1206	0/0:8,0:8:24.08:0,24,335
chr10	27846490	.	CT	C	10674.43	PASS	AB=0.947;AC=53;AF=0.946;AN=56;BaseQRankSum=-4.653;DP=594;FS=11.882;HRun=11;HaplotypeScore=64.9805;InbreedingCoeff=0.6417;MQ=77.94;MQ0=0;MQRankSum=-6.515;QD=18.53;ReadPosRankSum=4.940;VQSLOD=5.0745;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,14:17:35.95:296,36,0	1/1:2,6:8:17.97:148,18,0	0/1:17,1:15:34.25:34,0,192	0/0:18,0:17:29.86:0,30,307	1/1:4,33:38:91.82:736,92,0	1/1:0,22:22:65.92:542,66,0	1/1:2,12:14:26.97:222,27,0	1/1:5,22:28:42.30:491,42,0	1/1:2,10:12:31.78:251,32,0	1/1:7,22:30:70.92:544,71,0	1/1:3,27:30:74.88:616,75,0	1/1:4,13:17:38.93:320,39,0	1/1:2,16:18:41.94:345,42,0	1/1:4,17:21:38.94:320,39,0	1/1:2,18:20:50.93:419,51,0	1/1:4,17:21:50.93:419,51,0	1/1:2,19:21:53.94:443,54,0	1/1:1,10:11:23.97:197,24,0	1/1:7,19:26:56.89:465,57,0	1/1:5,25:31:64.86:515,65,0	1/1:1,12:13:35.96:296,36,0	1/1:2,11:14:32:252,32,0	1/1:5,18:25:51.85:391,52,0	1/1:0,13:14:38:301,38,0	1/1:4,27:31:65.90:542,66,0	1/1:3,29:32:86.88:711,87,0	1/1:6,21:27:62.90:514,63,0	1/1:3,14:17:42.82:347,43,0
chr10	27846865	.	TA	T	607.39	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.244;DP=521;FS=3.134;HRun=10;HaplotypeScore=52.4169;InbreedingCoeff=0.9111;MQ=70.56;MQ0=0;MQRankSum=0.023;QD=17.86;ReadPosRankSum=2.699;VQSLOD=4.2536;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:36.08:0,36,388	0/0:11,0:11:33.06:0,33,347	0/0:16,0:13:19.97:0,20,155	0/0:9,0:8:23.94:0,24,215	0/0:24,1:25:40.12:0,40,665	0/0:14,0:16:35.74:0,36,345	0/0:9,0:9:27.06:0,27,290	0/0:24,1:25:37.09:0,37,617	0/0:15,0:15:42.10:0,42,457	0/0:29,0:29:75.20:0,75,830	0/0:21,0:21:54.13:0,54,585	0/0:22,0:22:42.76:0,43,528	0/0:26,1:27:49.14:0,49,760	0/0:18,0:18:48.12:0,48,521	0/0:25,0:25:63.15:0,63,684	0/0:26,1:27:46.12:0,46,716	1/1:1,13:14:29.99:260,30,0	1/1:1,19:20:53.99:468,54,0	0/0:19,1:20:24.89:0,25,485	0/0:22,0:23:59.97:0,60,629	0/0:11,0:11:27.07:0,27,299	0/0:16,0:16:48.12:0,48,524	0/0:19,1:20:31.10:0,31,571	0/0:16,0:16:39.09:0,39,422	0/0:20,0:20:57.15:0,57,623	0/0:24,0:24:57.15:0,57,623	0/0:28,0:28:66.16:0,66,720	0/0:1,0:1:2.99:0,3,23
chr10	27847619	.	CTT	C	615.12	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.686;DP=527;FS=4.154;HRun=10;HaplotypeScore=63.0529;InbreedingCoeff=0.8835;MQ=63.49;MQ0=1;MQRankSum=0.358;QD=21.97;ReadPosRankSum=3.645;VQSLOD=2.9548;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:78.24:0,78,1193	0/0:10,0:10:27.08:0,27,406	0/0:8,0:7:9.02:0,9,137	0/0:3,0:3:2.89:0,3,16	0/0:29,0:31:80.76:0,81,1222	0/0:23,0:23:63.20:0,63,976	0/0:17,0:17:45.15:0,45,714	0/0:24,0:24:60.20:0,60,944	0/0:21,0:21:63.19:0,63,952	0/0:28,0:28:69.20:0,69,1067	0/0:24,0:24:60.10:0,60,919	0/0:17,0:17:48.16:0,48,760	0/0:25,0:27:71.19:0,71,1013	0/0:15,0:15:42.13:0,42,623	0/0:18,0:18:54.18:0,54,830	0/0:17,0:18:44.64:0,45,674	1/1:1,17:18:42.11:468,42,0	1/1:0,10:10:24.06:268,24,0	0/0:18,0:18:45.14:0,45,693	0/0:29,0:29:84.26:0,84,1286	0/0:5,0:5:15.03:0,15,213	0/0:17,0:17:36.12:0,36,572	0/0:16,0:18:47.65:0,48,705	0/0:11,0:11:30.10:0,30,476	0/0:20,0:20:59.69:0,60,909	0/0:30,0:30:84.24:0,84,1303	0/0:20,0:20:57.19:0,57,897	0/0:18,0:19:50.52:0,51,710
chr10	27848082	.	GA	G	619.71	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.319;DP=682;FS=0.000;HRun=9;HaplotypeScore=66.3065;InbreedingCoeff=0.9868;MQ=80.98;MQ0=0;MQRankSum=-2.202;QD=16.75;ReadPosRankSum=2.803;VQSLOD=3.7898;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,102,1154	0/0:13,0:13:39.10:0,39,439	0/0:23,1:24:21.06:0,21,416	0/0:14,0:14:17.78:0,18,168	0/0:29,0:29:84.20:0,84,932	0/0:32,0:32:84.23:0,84,953	0/0:24,0:24:66.17:0,66,741	0/0:28,0:28:72.20:0,72,815	0/0:20,0:20:57.16:0,57,649	0/0:38,1:39:65.81:0,66,1011	0/0:27,0:28:81.07:0,81,907	0/0:24,0:24:66.18:0,66,752	0/0:25,0:25:75.20:0,75,844	0/0:28,0:28:75.18:0,75,841	0/0:24,0:24:60.18:0,60,692	0/0:31,0:31:87.22:0,87,974	1/1:2,15:17:36.02:329,36,0	1/1:4,16:20:45.02:412,45,0	0/0:21,0:22:44.97:0,45,499	0/0:33,0:33:96.28:0,96,1100	0/0:27,0:27:78.21:0,78,882	0/0:19,1:20:17.67:0,18,457	0/0:23,0:23:63.17:0,63,709	0/0:26,0:26:72.16:0,72,790	0/0:14,0:14:42.12:0,42,477	0/0:24,0:24:60.16:0,60,677	0/0:29,2:31:35.34:0,35,914	0/0:7,0:7:21.06:0,21,242
chr10	27849609	.	T	TC	10677.37	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-9.103;DP=520;FS=0.588;HRun=8;HaplotypeScore=57.3238;InbreedingCoeff=0.8755;MQ=72.76;MQ0=10;MQRankSum=-4.801;QD=23.73;ReadPosRankSum=3.831;VQSLOD=5.3839;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,6:14:31.59:316,32,0	1/1:2,4:6:9.03:103,9,0	0/0:20,0:19:26.92:0,27,295	0/0:22,0:17:41.98:0,42,376	1/1:2,21:24:48.14:554,48,0	1/1:5,18:22:45.13:518,45,0	1/1:7,12:19:18.05:208,18,0	1/1:6,15:21:42.03:441,42,0	1/1:2,14:16:36.11:413,36,0	1/1:1,22:23:66.06:741,66,0	1/1:5,17:20:39.12:450,39,0	1/1:1,7:8:21.06:239,21,0	1/1:7,20:28:59.97:655,60,0	1/1:1,15:16:39.12:450,39,0	1/1:3,24:27:51.15:589,51,0	1/1:1,18:19:51.02:588,51,0	0/0:1,0:17:14.62:0,15,58	0/0:0,0:11:8.02:0,8,36	1/1:5,12:15:33.10:378,33,0	1/1:2,20:22:60.18:692,60,0	1/1:1,19:20:48.14:554,48,0	1/1:1,11:13:32.93:361,33,0	1/1:4,20:23:42.12:485,42,0	1/1:2,13:15:8.64:353,9,0	1/1:5,17:22:57.15:647,57,0	1/1:4,13:16:0.50:250,0,0	1/1:2,15:17:33.10:380,33,0	1/1:6,11:15:27.08:312,27,0
chr10	27854665	.	GA	G	11259.79	PASS	AB=0.934;AC=50;AF=0.893;AN=56;BaseQRankSum=1.319;DP=598;FS=1.859;HRun=10;HaplotypeScore=68.1432;InbreedingCoeff=0.6700;MQ=71.39;MQ0=0;MQRankSum=-4.205;QD=19.79;ReadPosRankSum=2.942;VQSLOD=5.9185;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,14:16:41.99:365,42,0	1/1:2,9:11:23.99:208,24,0	0/1:16,1:17:9.84:10,0,313	0/1:11,1:12:7.75:8,0,231	1/1:3,30:33:80.98:703,81,0	1/1:2,18:20:17.81:384,18,0	1/1:3,9:12:26.99:234,27,0	1/1:10,27:37:80.94:697,81,0	1/1:2,20:23:53.01:449,53,0	1/1:4,28:32:83.98:729,84,0	1/1:2,23:25:62.98:546,63,0	1/1:4,22:26:32.79:514,33,0	1/1:5,19:24:53.97:469,54,0	1/1:1,18:19:53.99:469,54,0	1/1:5,20:25:23.81:436,24,0	1/1:2,34:36:83.98:729,84,0	0/0:19,0:19:51.14:0,51,564	0/0:10,0:10:28.29:0,28,290	1/1:5,8:13:29.97:259,30,0	1/1:2,26:28:68.94:598,69,0	1/1:1,13:14:35.99:312,36,0	1/1:2,26:28:74.97:650,75,0	1/1:4,17:21:47.98:416,48,0	1/1:2,5:7:11.99:104,12,0	1/1:1,18:19:50.98:443,51,0	1/1:3,23:26:68.94:590,69,0	1/1:3,24:27:59.98:521,60,0	1/1:2,16:18:47.98:417,48,0
chr10	27856040	.	A	ATACTTTAT	11056.16	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-3.429;DP=335;FS=11.396;HRun=0;HaplotypeScore=65.3965;InbreedingCoeff=0.7209;MQ=71.05;MQ0=0;MQRankSum=-4.508;QD=37.86;ReadPosRankSum=-0.939;VQSLOD=3.1840;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,10:16:9.03:377,9,0	1/1:5,0:5:9.03:200,9,0	0/0:12,0:12:15.04:0,15,259	0/0:4,0:4:5.97:0,6,77	1/1:2,8:11:21.03:554,21,0	1/1:5,17:25:27.09:1132,27,0	1/1:10,0:10:15.05:289,15,0	1/1:23,0:33:69.18:1422,69,0	1/1:9,0:9:12.04:206,12,0	1/1:7,11:19:24.08:696,24,0	1/1:4,12:17:33.11:967,33,0	1/1:5,0:5:12.04:213,12,0	1/1:5,7:13:6.02:251,6,0	1/1:6,0:6:12.04:252,12,0	1/1:4,7:13:15.05:629,15,0	1/1:2,6:8:3.01:126,3,0	0/0:18,0:18:39.11:0,39,893	0/0:9,0:9:21.07:0,21,547	1/1:7,5:12:15.04:391,15,0	1/1:13,0:13:27.06:405,27,0	1/1:3,3:6:6.02:102,6,0	1/1:3,6:9:15.05:541,15,0	1/1:3,8:12:10.28:380,10,0	1/1:3,0:3:9.03:198,9,0	1/1:4,16:20:21.07:759,21,0	1/1:2,6:10:24.06:588,24,0	1/1:4,7:11:6.02:252,6,0	1/1:0,5:6:3.01:126,3,0
chr10	27859104	.	TATAAAATATG	T	32833.71	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=8.705;DP=559;FS=1.928;HRun=0;HaplotypeScore=197.0711;InbreedingCoeff=0.9249;MQ=67.05;MQ0=0;MQRankSum=-9.782;QD=65.41;ReadPosRankSum=4.657;VQSLOD=4.6800;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,12:15:24.08:756,24,0	1/1:2,5:7:12.04:378,12,0	0/0:15,0:15:33.11:0,33,1283	0/0:11,0:11:25.87:0,26,884	1/1:4,23:27:69.19:2034,69,0	1/1:6,26:32:69.24:2173,69,0	1/1:5,8:13:24.08:756,24,0	1/1:18,20:37:60.16:1619,60,0	1/1:1,12:13:30.10:944,30,0	1/1:6,21:27:57.16:1652,57,0	1/1:5,23:28:69.24:2170,69,0	1/1:3,11:14:30.10:921,30,0	1/1:3,23:26:60.21:1890,60,0	1/1:2,23:25:60.21:1889,60,0	1/1:4,20:24:54.19:1701,54,0	1/1:5,15:20:39.13:1229,39,0	0/0:23,0:23:63.22:0,63,3065	0/0:7,0:7:18.06:0,18,901	1/1:8,8:16:27.04:639,27,0	1/1:4,33:37:96.16:2793,96,0	1/1:3,3:6:3.01:94,3,0	1/1:1,19:20:54.18:1643,54,0	1/1:6,17:23:48.16:1511,48,0	1/1:8,6:14:9.03:283,9,0	1/1:3,19:22:48.16:1512,48,0	1/1:3,25:28:75.24:2265,75,0	1/1:4,15:19:42.14:1322,42,0	1/1:1,7:8:21.07:661,21,0
chr10	27859277	.	G	GGTCC	1715.03	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-7.589;DP=619;FS=0.836;HRun=0;HaplotypeScore=141.2814;InbreedingCoeff=0.9895;MQ=94.49;MQ0=0;MQRankSum=-3.397;QD=57.17;ReadPosRankSum=2.100;VQSLOD=4.7772;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:66.19:0,66,1168	0/0:7,0:7:21.07:0,21,382	0/0:22,0:23:60.21:0,60,1119	0/0:36,0:36:96.30:0,96,1730	0/0:29,0:29:81.28:0,81,1511	0/0:26,0:26:75.26:0,75,1400	0/0:14,0:14:42.10:0,42,748	0/0:32,0:32:90.30:0,90,1651	0/0:20,0:20:60.15:0,60,1053	0/0:19,0:19:54.19:0,54,1008	0/0:14,0:14:36.12:0,36,672	0/0:31,0:31:90.27:0,90,1638	0/0:36,0:36:90.31:0,90,1667	0/0:24,0:24:69.24:0,69,1288	0/0:22,0:22:66.23:0,66,1231	0/0:19,0:19:51.14:0,51,910	1/1:4,20:24:54.19:1434,54,0	1/1:0,6:6:15.05:399,15,0	0/0:19,0:19:48.16:0,48,888	0/0:26,0:26:72.25:0,72,1344	0/0:29,0:29:87.23:0,87,1578	0/0:20,0:20:60.21:0,60,1120	0/0:20,0:20:57.16:0,57,994	0/0:21,0:21:51.09:0,51,880	0/0:24,0:24:69.24:0,69,1288	0/0:14,0:14:36.12:0,36,672	0/0:27,0:27:81.28:0,81,1504	0/0:13,0:12:39.12:0,39,697
chr10	27859858	.	C	CT	26973.38	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-12.692;DP=778;FS=0.000;HRun=2;HaplotypeScore=63.7517;InbreedingCoeff=0.9994;MQ=90.43;MQ0=0;MQRankSum=-8.404;QD=39.78;ReadPosRankSum=3.887;VQSLOD=5.1182;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,24:24:72.20:1014,72,0	1/1:0,16:16:45.15:648,45,0	0/0:39,0:39:99:0,99,1179	0/0:22,0:22:63.19:0,63,764	1/1:0,25:25:72.24:1037,72,0	1/1:1,45:46:99:1728,120,0	1/1:2,28:30:72.24:1037,72,0	1/1:0,25:25:72.24:1037,72,0	1/1:1,24:25:69.23:993,69,0	1/1:1,31:32:93.29:1302,93,0	1/1:0,24:24:72.24:1037,72,0	1/1:1,27:28:81.27:1167,81,0	1/1:0,37:38:99:1587,111,0	1/1:2,31:33:90.30:1296,90,0	1/1:2,33:35:96.32:1383,96,0	1/1:0,32:32:90.30:1296,90,0	0/0:24,0:24:69.22:0,69,855	0/0:15,0:15:39.12:0,39,483	1/1:0,17:17:51.15:714,51,0	1/1:0,31:31:93.28:1317,93,0	1/1:0,30:30:84.28:1210,84,0	1/1:0,26:26:69.23:994,69,0	1/1:0,30:31:90.30:1292,90,0	1/1:1,16:17:39.13:562,39,0	1/1:0,28:28:81.27:1167,81,0	1/1:2,34:36:99:1450,102,0	1/1:1,39:39:96.32:1382,96,0	1/1:0,8:8:24.05:324,24,0
chr10	27860401	.	AT	A	19224.38	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=3.112;DP=745;FS=6.149;HRun=5;HaplotypeScore=79.7914;InbreedingCoeff=0.9994;MQ=89.36;MQ0=0;MQRankSum=-8.082;QD=29.58;ReadPosRankSum=5.740;VQSLOD=5.0765;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,20:22:58.72:650,59,0	1/1:0,9:9:27.08:306,27,0	0/0:25,0:25:67.01:0,67,816	0/0:30,0:30:80.97:0,81,993	1/1:0,28:28:81.23:917,81,0	1/1:2,37:39:96.23:1074,96,0	1/1:3,19:22:57.15:637,57,0	1/1:7,37:44:99:1195,108,0	1/1:1,21:22:54.15:612,54,0	1/1:0,23:23:66.17:735,66,0	1/1:2,14:16:36.10:405,36,0	1/1:0,32:32:93.27:1055,93,0	1/1:2,36:38:92.32:1144,92,0	1/1:1,34:35:81.23:918,81,0	1/1:1,24:25:69.20:783,69,0	1/1:0,25:25:63.08:714,63,0	0/0:28,0:28:75.25:0,75,1025	0/0:12,0:12:27.06:0,27,349	1/1:4,31:35:93.20:1021,93,0	1/1:0,38:38:99:1151,111,0	1/1:2,26:28:72.20:815,72,0	1/1:3,27:30:78.22:877,78,0	1/1:0,19:19:50.07:576,50,0	1/1:1,13:14:36.10:408,36,0	1/1:3,27:30:72.20:816,72,0	1/1:3,25:28:75.21:850,75,0	1/1:1,31:32:90.26:1020,90,0	1/1:0,16:16:48.14:544,48,0
chr10	27862100	.	T	TCTGAGACTA	67089.72	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-7.732;DP=711;FS=7.592;HRun=0;HaplotypeScore=154.9252;InbreedingCoeff=0.8604;MQ=79.51;MQ0=0;MQRankSum=-11.403;QD=102.43;ReadPosRankSum=6.494;VQSLOD=4.7101;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:9,8:20:30.10:1439,30,0	1/1:5,3:10:12.04:586,12,0	0/0:28,0:28:68.37:0,68,1833	0/0:27,0:28:72.15:0,72,1590	1/1:6,13:22:36.12:1715,36,0	1/1:7,32:46:93.32:4505,93,0	1/1:8,14:25:60.21:2787,60,0	1/1:30,21:65:99:7149,184,0	1/1:4,16:23:51.18:2474,51,0	1/1:7,15:26:72.25:3152,72,0	1/1:11,13:25:54.19:2608,54,0	1/1:6,24:31:81.28:3951,81,0	1/1:10,20:32:75.26:3646,75,0	1/1:6,19:26:66.23:3169,66,0	1/1:10,31:44:99:4938,102,0	1/1:6,23:33:81.28:3921,81,0	1/1:6,7:18:21.06:1025,21,0	1/1:2,1:3:6.02:291,6,0	1/1:17,6:27:81.25:3021,81,0	1/1:8,15:28:51.18:2449,51,0	1/1:2,2:11:6.02:293,6,0	1/1:7,9:19:36.12:1730,36,0	1/1:6,13:21:42.14:1991,42,0	1/1:3,9:15:21.07:983,21,0	1/1:6,22:27:66.23:3165,66,0	1/1:12,14:27:78.26:3526,78,0	1/1:4,15:24:51.18:2484,51,0	1/1:4,0:4:8.99:94,9,0
chr10	27862348	.	GT	G	10701.11	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=0.426;DP=557;FS=2.405;HRun=9;HaplotypeScore=189.6991;InbreedingCoeff=0.8886;MQ=56.14;MQ0=0;MQRankSum=-6.122;QD=20.90;ReadPosRankSum=2.710;VQSLOD=2.9989;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,10:14:1.09:169,1,0	1/1:0,8:8:21.01:192,21,0	0/0:8,0:8:15.04:0,15,165	0/0:11,0:10:12.51:0,13,140	1/1:4,20:24:56.95:504,57,0	1/1:7,23:30:69.01:627,69,0	1/1:9,10:19:35.96:313,36,0	1/1:7,20:27:62.95:561,63,0	1/1:4,7:11:24:219,24,0	1/1:3,13:16:41.99:377,42,0	1/1:7,15:22:47.99:432,48,0	1/1:6,11:17:35.95:313,36,0	1/1:5,22:27:69.03:630,69,0	1/1:2,23:25:66.01:603,66,0	1/1:5,26:31:74.99:678,75,0	1/1:7,20:27:66.03:602,66,0	0/0:18,0:18:41.57:0,42,444	0/0:8,0:8:20.97:0,21,202	1/1:7,19:26:62.92:555,63,0	1/1:10,29:39:90.02:818,90,0	1/1:3,6:9:11.40:93,11,0	1/1:3,9:12:29.98:267,30,0	1/1:1,19:20:54.03:494,54,0	1/1:4,12:16:26.99:245,27,0	1/1:9,23:32:72.01:657,72,0	1/1:8,21:29:66:596,66,0	1/1:2,26:28:77.99:700,78,0	1/1:1,2:3:6:55,6,0
chr10	27863103	.	G	GA	15926.34	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-10.821;DP=609;FS=9.281;HRun=7;HaplotypeScore=53.6029;InbreedingCoeff=0.9353;MQ=83.06;MQ0=0;MQRankSum=-6.763;QD=29.82;ReadPosRankSum=3.749;VQSLOD=5.0733;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,16:17:36.11:435,36,0	1/1:1,11:12:30.09:362,30,0	0/0:23,0:23:46.82:0,47,453	0/0:19,0:19:52.09:0,52,467	1/1:2,33:35:99:1178,99,0	1/1:3,15:18:39.12:471,39,0	1/1:1,12:13:27.08:326,27,0	1/1:11,29:40:87.20:1011,87,0	1/1:1,20:21:54.17:652,54,0	1/1:3,24:27:75.22:892,75,0	1/1:0,19:19:57.14:673,57,0	1/1:1,23:24:60.18:717,60,0	1/1:1,16:17:42.13:507,42,0	1/1:2,19:21:57.17:678,57,0	1/1:3,24:27:17.28:776,17,0	1/1:2,19:21:54.17:652,54,0	0/0:16,0:16:48.06:0,48,457	0/0:17,0:17:42.04:0,42,398	1/1:1,21:22:63.16:731,63,0	1/1:5,28:33:84.26:1015,84,0	1/1:3,7:10:15.05:181,15,0	1/1:1,24:25:66.12:765,66,0	1/1:2,19:21:53.76:652,54,0	1/1:1,13:14:36.11:435,36,0	1/1:5,29:34:81.25:979,81,0	1/1:3,27:30:81.20:942,81,0	1/1:5,24:29:66.20:797,66,0	1/1:1,3:4:1.54:99,2,0
chr10	27863652	.	A	AG	25054.34	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-5.253;DP=728;FS=1.929;HRun=2;HaplotypeScore=80.7488;InbreedingCoeff=0.9987;MQ=82.31;MQ0=0;MQRankSum=-6.734;QD=39.39;ReadPosRankSum=3.297;VQSLOD=5.3492;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,56:59:99:2245,157,0	1/1:0,13:13:39.13:561,39,0	0/0:19,0:19:54.14:0,54,623	0/0:19,0:19:51.03:0,51,565	1/1:2,25:27:75.25:1080,75,0	1/1:2,23:24:66.22:950,66,0	1/1:0,20:20:54.18:777,54,0	1/1:1,35:36:99:1415,105,0	1/1:1,26:27:69.23:993,69,0	1/1:2,25:27:78.22:1071,78,0	1/1:1,24:25:72.24:1036,72,0	1/1:0,25:25:62.80:873,63,0	1/1:1,21:22:60.20:864,60,0	1/1:1,28:29:84.28:1209,84,0	1/1:0,32:32:93.31:1337,93,0	1/1:0,27:27:72.24:1037,72,0	0/0:41,0:41:98.03:0,98,1345	0/0:13,0:13:39.12:0,39,483	1/1:2,16:18:48.16:689,48,0	1/1:1,31:32:96.31:1363,96,0	1/1:0,12:12:30.10:432,30,0	1/1:2,30:32:87.29:1249,87,0	1/1:3,33:36:93.26:1337,93,0	1/1:0,23:23:69.23:993,69,0	1/1:1,18:19:51.17:734,51,0	1/1:2,24:27:75.21:1040,75,0	1/1:1,35:36:99:1468,102,0	1/1:0,7:7:21.07:302,21,0
chr10	27866305	.	GA	G	14590.01	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-4.695;DP=622;FS=2.945;HRun=7;HaplotypeScore=65.7276;InbreedingCoeff=0.9696;MQ=84.34;MQ0=0;MQRankSum=-9.246;QD=25.64;ReadPosRankSum=6.360;VQSLOD=4.9461;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:4,23:27:63.13:643,63,0	1/1:1,6:7:15.03:153,15,0	0/0:30,0:31:75.73:0,76,841	0/0:22,0:19:13.22:0,13,382	1/1:5,26:31:72.11:723,72,0	1/1:1,25:26:63.14:643,63,0	1/1:1,11:12:30.07:306,30,0	1/1:6,33:39:96.18:966,96,0	1/1:2,23:25:63.14:643,63,0	1/1:5,20:25:60.12:605,60,0	1/1:0,19:19:54.12:551,54,0	1/1:1,21:22:54.12:551,54,0	1/1:1,33:34:78.14:785,78,0	1/1:3,18:21:51.11:520,51,0	1/1:1,15:16:45.10:459,45,0	1/1:3,26:29:69.16:704,69,0	1/1:2,17:18:45.10:459,45,0	1/1:2,7:9:24.05:240,24,0	1/1:1,25:26:72.13:719,72,0	1/1:2,23:25:69.16:704,69,0	1/1:1,10:11:27.06:275,27,0	1/1:0,28:28:78.17:795,78,0	1/1:1,26:27:78.18:795,78,0	1/1:1,20:21:51.12:520,51,0	1/1:1,16:17:42.10:428,42,0	1/1:1,25:26:75.16:759,75,0	1/1:2,17:19:48.11:490,48,0	1/1:3,5:8:15.03:153,15,0
chr10	27867365	.	T	TA	13041.58	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-7.919;DP=500;FS=0.000;HRun=7;HaplotypeScore=43.7157;InbreedingCoeff=0.9626;MQ=67.02;MQ0=0;MQRankSum=-2.258;QD=29.57;ReadPosRankSum=0.811;VQSLOD=4.9875;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,26:31:62.92:845,63,0	1/1:1,7:8:21.06:254,21,0	0/0:13,0:11:17.97:0,18,159	0/0:8,0:7:11.83:0,12,107	1/1:8,33:41:93.24:1105,93,0	1/1:1,22:23:63.19:761,63,0	1/1:2,8:10:21.02:237,21,0	1/1:3,24:26:69.14:793,69,0	1/1:0,10:10:30.09:362,30,0	1/1:1,12:13:36.11:434,36,0	1/1:3,30:33:78.24:942,78,0	1/1:2,15:17:45.14:544,45,0	1/1:0,16:16:45.14:544,45,0	1/1:1,18:19:51.16:616,51,0	1/1:0,16:16:39.12:471,39,0	1/1:1,10:11:30.09:362,30,0	0/0:20,0:20:45.07:0,45,435	0/0:18,0:17:30.04:0,30,290	1/1:2,12:14:36.11:434,36,0	1/1:5,28:33:70.46:837,70,0	1/1:1,10:11:18.06:217,18,0	1/1:0,9:9:24.07:290,24,0	1/1:1,7:8:15.05:181,15,0	1/1:0,3:3:9.03:109,9,0	1/1:1,16:17:42.13:507,42,0	1/1:3,24:27:72.19:854,72,0	1/1:1,34:35:84.26:1015,84,0	1/1:0,9:9:27.08:326,27,0
chr10	27868355	.	GA	G	22773.38	PASS	AC=48;AF=0.923;AN=52;BaseQRankSum=-0.332;DP=653;FS=8.004;HRun=1;HaplotypeScore=111.5048;InbreedingCoeff=0.9420;MQ=79.97;MQ0=0;MQRankSum=-11.034;QD=38.47;ReadPosRankSum=6.412;VQSLOD=3.9977;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,43:43:99:1426,102,0	1/1:0,4:4:9.03:126,9,0	0/0:29,0:29:82.13:0,82,1223	0/0:32,0:31:82.26:0,82,1194	1/1:0,11:11:33.11:461,33,0	1/1:0,18:18:51.17:713,51,0	1/1:0,22:22:54.18:755,54,0	1/1:0,41:41:99:1703,123,0	1/1:0,29:29:81.27:1133,81,0	1/1:0,20:20:60.19:823,60,0	1/1:0,13:13:33.07:439,33,0	1/1:0,29:29:84.24:1153,84,0	1/1:0,35:35:93.16:1300,93,0	1/1:0,25:25:72.24:1004,72,0	1/1:0,47:47:99:1721,123,0	1/1:0,30:30:78.26:1091,78,0	./.	./.	1/1:0,22:22:66.21:906,66,0	1/1:0,11:11:30.08:402,30,0	1/1:0,44:44:99:1804,129,0	1/1:0,13:13:30.10:420,30,0	1/1:0,15:15:45.15:629,45,0	1/1:0,26:26:69.23:965,69,0	1/1:0,32:31:90.30:1258,90,0	1/1:0,21:21:63.19:862,63,0	1/1:0,37:37:99:1552,111,0	1/1:0,4:4:9.03:126,9,0
chr10	27868621	.	T	TTG	1977.46	PASS	AB=0.908;AC=32;AF=0.667;AN=48;BaseQRankSum=-0.636;DP=507;FS=9.161;HRun=0;HaplotypeScore=148.0373;InbreedingCoeff=-0.3260;MQ=55.80;MQ0=21;MQRankSum=-1.053;QD=4.21;ReadPosRankSum=-0.825;VQSLOD=2.2516;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:31,2:32:50.40:197,0,50	1/1:7,4:11:9.03:132,9,0	./.	./.	0/1:21,7:29:0.05:0,0,0	0/1:23,3:25:24.03:104,0,24	0/1:25,1:24:18.30:64,0,18	1/1:30,0:28:2.19:5,2,0	0/1:26,1:27:25.84:26,0,71	0/1:19,4:22:16.16:89,0,16	1/1:17,1:18:10.63:93,11,0	0/1:15,1:16:14.05:37,0,14	0/1:12,2:14:45.30:103,0,45	0/1:17,4:20:20.86:107,0,21	1/1:7,14:21:21:269,21,0	0/1:8,0:8:36.65:37,0,43	./.	./.	0/1:26,0:24:5.14:106,0,5	1/1:15,3:18:8.17:56,8,0	1/1:31,2:28:26.61:262,27,0	0/0:5,0:5:2.98:0,3,31	1/1:3,5:8:3.01:44,3,0	0/1:11,8:18:66.48:66,0,108	0/1:18,1:18:47.79:68,0,48	1/1:11,0:10:8.74:57,9,0	1/1:10,6:17:12.51:159,13,0	0/1:12,0:10:20.54:37,0,21
chr10	27871584	.	CT	C	14697.16	PASS	AC=48;AF=0.923;AN=52;BaseQRankSum=3.600;DP=560;FS=5.042;HRun=7;HaplotypeScore=157.9037;InbreedingCoeff=0.9701;MQ=83.72;MQ0=0;MQRankSum=-8.436;QD=27.89;ReadPosRankSum=5.023;VQSLOD=2.9177;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,28:29:75.17:765,75,0	1/1:1,10:11:30.07:306,30,0	0/0:16,0:16:38.89:0,39,444	0/0:17,0:17:36.04:0,36,404	1/1:1,27:28:81.18:826,81,0	1/1:2,21:23:57.13:582,57,0	1/1:1,16:17:45.10:459,45,0	1/1:7,20:27:60.12:605,60,0	1/1:2,23:25:63.14:643,63,0	1/1:0,23:23:69.14:696,69,0	1/1:0,15:15:45.10:459,45,0	1/1:1,26:27:75.17:765,75,0	1/1:2,21:23:63.14:643,63,0	1/1:2,25:27:75.17:765,75,0	1/1:0,25:25:75.17:765,75,0	1/1:1,29:30:84.19:857,84,0	./.	./.	1/1:2,18:20:54.11:550,54,0	1/1:0,17:17:48.11:490,48,0	1/1:0,13:13:36.08:367,36,0	1/1:1,16:17:48.11:490,48,0	1/1:2,14:16:42.09:428,42,0	1/1:0,18:18:54.12:551,54,0	1/1:2,17:19:51.11:520,51,0	1/1:2,34:36:99:1033,102,0	1/1:2,36:38:99:1040,102,0	1/1:0,3:3:9.02:92,9,0
chr10	27875099	.	CT	C	739.55	PASS	AB=0.606;AC=1;AF=0.018;AN=56;BaseQRankSum=1.490;DP=722;FS=2.895;HRun=1;HaplotypeScore=107.3160;InbreedingCoeff=-0.0184;MQ=58.48;MQ0=4;MQRankSum=0.477;QD=18.49;ReadPosRankSum=-0.578;VQSLOD=3.7305;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:14,26:39:99:814,0,514	0/0:10,0:10:30.10:0,30,479	0/0:35,0:27:81.18:0,81,1198	0/0:19,0:17:43.70:0,44,675	0/0:33,0:33:98.88:0,99,1470	0/0:16,0:16:45.15:0,45,718	0/0:27,0:27:81.25:0,81,1235	0/0:32,0:30:90.29:0,90,1395	0/0:23,0:23:66.23:0,66,1051	0/0:29,0:29:87.30:0,87,1390	0/0:10,0:10:30.10:0,30,479	0/0:31,0:31:93.27:0,93,1415	0/0:30,0:30:87.28:0,87,1365	0/0:32,0:32:96.33:0,96,1529	0/0:32,0:32:96.30:0,96,1481	0/0:25,0:25:75.26:0,75,1198	0/0:32,0:32:93.30:0,93,1461	0/0:23,0:23:69.07:0,69,1068	0/0:29,0:25:71.87:0,72,1061	0/0:22,0:22:66.16:0,66,981	0/0:45,0:44:99:0,123,1905	0/0:17,0:17:48.16:0,48,767	0/0:14,0:14:39.13:0,39,622	0/0:49,0:49:99:0,147,2264	0/0:16,0:16:45.14:0,45,694	0/0:29,0:28:84.28:0,84,1322	0/0:15,0:15:42.13:0,42,638	0/0:7,0:7:21.07:0,21,335
chr10	27877291	.	C	CAAA	30208.67	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-2.933;DP=710;FS=3.010;HRun=7;HaplotypeScore=135.5328;InbreedingCoeff=0.9944;MQ=75.95;MQ0=0;MQRankSum=-7.730;QD=47.80;ReadPosRankSum=1.579;VQSLOD=3.7113;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,19:23:60.21:1197,60,0	1/1:1,11:13:36.12:727,36,0	0/0:12,0:12:30.10:0,30,409	0/0:24,0:25:26.69:0,27,616	1/1:3,32:36:96.29:1883,96,0	1/1:5,15:21:45.13:894,45,0	1/1:7,15:22:51.13:993,51,0	1/1:12,38:54:99:2759,144,0	1/1:2,10:17:39.09:711,39,0	1/1:11,26:38:87.29:1739,87,0	1/1:5,16:23:54.16:1016,54,0	1/1:5,23:28:72.25:1432,72,0	1/1:5,23:32:78.27:1594,78,0	1/1:3,15:21:57.13:1044,57,0	1/1:3,24:29:69.24:1426,69,0	1/1:3,29:32:84.29:1720,84,0	0/0:26,0:26:69.22:0,69,941	0/0:15,0:15:33.57:0,34,452	1/1:8,15:24:51.17:1022,51,0	1/1:5,23:30:78.22:1486,78,0	1/1:3,10:13:24.08:475,24,0	1/1:6,20:27:66.18:1276,66,0	1/1:6,24:30:72.25:1444,72,0	1/1:2,15:19:39.09:728,39,0	1/1:5,26:31:78.27:1591,78,0	1/1:5,19:25:57.19:1148,57,0	1/1:5,29:35:78.27:1593,78,0	1/1:0,8:8:15.05:311,15,0
chr10	27877502	.	GT	G	17236.99	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=13.713;DP=602;FS=4.060;HRun=3;HaplotypeScore=267.1831;InbreedingCoeff=0.9979;MQ=79.58;MQ0=0;MQRankSum=-13.406;QD=33.34;ReadPosRankSum=3.864;VQSLOD=3.5291;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,28:28:69.15:831,69,0	1/1:0,9:9:27.08:334,27,0	0/0:29,0:29:78.19:0,78,1024	0/0:21,0:21:57.19:0,57,810	1/1:0,21:21:54.13:647,54,0	1/1:0,15:15:42.13:519,42,0	1/1:0,15:15:39.08:465,39,0	1/1:0,31:31:90.26:1096,90,0	1/1:0,16:16:45.11:540,45,0	1/1:0,25:25:75.24:928,75,0	1/1:0,11:11:32.94:385,33,0	1/1:0,36:36:99:1282,105,0	1/1:0,27:27:81.25:1002,81,0	1/1:0,19:19:48.15:593,48,0	1/1:0,35:35:93.29:1150,93,0	1/1:0,33:33:90.28:1112,90,0	0/0:21,0:21:63.20:0,63,889	0/0:14,0:14:42.14:0,42,605	1/1:0,15:15:45.14:557,45,0	1/1:0,26:26:75.24:928,75,0	1/1:0,14:13:23.94:258,24,0	1/1:1,19:20:57.18:704,57,0	1/1:0,17:17:48.15:591,48,0	1/1:2,18:20:38.82:481,39,0	1/1:0,23:23:63.20:777,63,0	1/1:0,23:23:66.21:814,66,0	1/1:0,30:30:81.19:982,81,0	1/1:0,8:8:21.07:260,21,0
chr10	27877598	.	TA	T	12006.08	PASS	AB=0.795;AC=49;AF=0.875;AN=56;BaseQRankSum=9.094;DP=665;FS=0.000;HRun=10;HaplotypeScore=78.9177;InbreedingCoeff=0.5799;MQ=69.16;MQ0=0;MQRankSum=-2.763;QD=19.49;ReadPosRankSum=0.193;VQSLOD=5.4291;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,29:39:95.91:820,96,0	1/1:0,18:18:50.99:443,51,0	0/1:12,1:11:25.85:26,0,52	0/1:13,1:14:4.98:5,0,172	1/1:2,35:37:92.12:760,92,0	1/1:3,16:19:47.99:417,48,0	1/1:6,19:25:44.97:391,45,0	1/1:7,26:33:48.45:613,48,0	1/1:1,17:18:41.92:356,42,0	1/1:9,17:26:62.94:541,63,0	1/1:3,14:17:38.88:329,39,0	1/1:0,18:18:41.99:364,42,0	1/1:3,23:26:71.75:604,72,0	1/1:9,14:23:53.93:457,54,0	1/1:10,21:31:69.92:636,70,0	1/1:7,21:28:71.89:610,72,0	0/0:33,0:33:93.23:0,93,1012	0/0:16,0:16:48.11:0,48,520	1/1:2,21:23:62.77:515,63,0	1/1:1,21:22:59.85:505,60,0	0/1:2,21:23:6.37:409,0,6	1/1:4,24:28:68.91:590,69,0	1/1:2,12:14:29.99:261,30,0	1/1:8,27:35:68.92:591,69,0	1/1:1,27:28:65.99:573,66,0	1/1:3,19:22:56.78:473,57,0	1/1:10,20:30:68.94:589,69,0	1/1:0,6:6:15:130,15,0
chr10	27878096	.	GAA	G	19438.01	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-1.419;DP=741;FS=4.054;HRun=8;HaplotypeScore=135.7231;InbreedingCoeff=0.9950;MQ=82.02;MQ0=1;MQRankSum=-6.900;QD=29.86;ReadPosRankSum=0.640;VQSLOD=3.7652;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,43:45:99:1391,114,0	1/1:1,7:8:15.04:183,15,0	0/0:29,1:30:42.14:0,42,1195	0/0:17,0:18:42.12:0,42,651	1/1:3,24:27:36.07:439,36,0	1/1:3,29:31:81.25:988,81,0	1/1:4,25:29:57.17:695,57,0	1/1:2,31:33:90.20:1060,90,0	1/1:0,24:24:63.20:769,63,0	1/1:3,26:29:75.21:902,75,0	1/1:2,12:14:27.05:329,27,0	1/1:0,30:30:87.27:1061,87,0	1/1:3,35:38:99:1206,99,0	1/1:1,33:34:93.29:1133,93,0	1/1:6,25:31:72.22:878,72,0	1/1:0,27:27:75.24:915,75,0	0/0:0,0:25:69.11:0,69,670	0/0:0,0:17:45.07:0,45,437	1/1:4,20:24:60.19:732,60,0	1/1:4,18:22:33.07:403,33,0	1/1:0,37:37:99:1281,105,0	1/1:2,25:27:63.18:768,63,0	1/1:0,28:28:69.02:842,69,0	1/1:1,25:26:57.17:695,57,0	1/1:2,24:26:66.21:805,66,0	1/1:3,26:29:78.22:938,78,0	1/1:1,19:20:54.16:659,54,0	1/1:1,10:11:30.09:366,30,0
chr10	27878346	.	T	TGAATGTTCATTTTAAAATGCATC	76448.57	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-0.813;DP=656;FS=3.616;HRun=0;HaplotypeScore=313.3833;InbreedingCoeff=0.9071;MQ=71.52;MQ0=0;MQRankSum=-10.473;QD=132.49;ReadPosRankSum=3.687;VQSLOD=4.2124;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:15:42.13:2566,42,0	1/1:2,5:11:15.05:1111,15,0	0/0:18,0:19:56.83:0,57,994	0/0:17,0:17:47.93:0,48,1081	1/1:31,3:34:84.23:2530,84,0	1/1:23,1:24:66.16:2062,66,0	1/1:23,0:23:66.08:3870,66,0	1/1:47,0:47:99:4602,138,0	1/1:8,11:24:39.13:3296,39,0	1/1:13,10:30:77.99:5349,78,0	1/1:17,2:19:57.08:1776,57,0	1/1:7,14:27:27.09:2459,27,0	1/1:9,12:26:33.11:2542,33,0	1/1:22,2:23:69.22:4490,69,0	1/1:27,3:30:87.29:5523,87,0	1/1:12,13:26:42.14:3983,42,0	0/0:22,0:22:57.11:0,57,2341	0/0:21,0:21:42.04:0,42,1699	1/1:25,0:25:66.16:3079,66,0	1/1:11,23:37:57.19:4562,57,0	1/1:1,0:1:3:27,3,0	1/1:13,9:26:60.16:4659,60,0	1/1:6,11:23:24.15:2199,24,0	1/1:3,1:4:9.03:688,9,0	1/1:29,7:36:99:5413,105,0	1/1:29,2:31:91.17:4788,91,0	1/1:11,11:28:45.63:4240,46,0	1/1:1,5:6:6.02:633,6,0
chr10	27878406	.	G	GAAAA	13202.03	PASS	AB=1.000;AC=53;AF=0.946;AN=56;BaseQRankSum=-3.546;DP=481;FS=0.000;HRun=11;HaplotypeScore=125.1642;InbreedingCoeff=0.3966;MQ=64.95;MQ0=0;MQRankSum=-4.079;QD=28.15;ReadPosRankSum=-0.388;VQSLOD=3.0461;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,14:21:30.10:649,30,0	1/1:2,0:2:3.01:69,3,0	0/0:11,0:11:12.78:0,13,122	0/1:12,0:12:33.93:36,0,34	1/1:16,9:25:46.78:807,47,0	1/1:4,10:21:33.11:653,33,0	1/1:5,4:13:17.98:295,18,0	1/1:11,13:30:54.59:845,55,0	1/1:10,3:14:27.05:524,27,0	1/1:21,3:26:45.11:716,45,0	1/1:1,8:10:24.04:494,24,0	1/1:12,2:14:32.79:495,33,0	1/1:23,2:26:63.17:1226,63,0	1/1:9,14:24:18.06:416,18,0	1/1:10,15:27:21.07:486,21,0	1/1:11,3:18:36.03:636,36,0	1/1:4,0:19:21.07:261,21,0	1/1:3,0:9:11.90:110,12,0	1/1:9,1:18:39.09:594,39,0	1/1:14,3:20:33:524,33,0	1/1:5,0:5:9.50:180,10,0	1/1:11,0:12:9.03:158,9,0	1/1:9,4:15:30.04:462,30,0	1/1:1,4:6:3.01:37,3,0	1/1:7,20:30:54.13:1148,54,0	1/1:12,15:29:7.69:729,8,0	1/1:17,2:19:33.04:556,33,0	1/1:1,0:3:6.02:94,6,0
chr10	27879410	.	TA	T	11531.46	PASS	AB=0.889;AC=49;AF=0.875;AN=56;BaseQRankSum=-8.282;DP=613;FS=2.625;HRun=10;HaplotypeScore=64.6041;InbreedingCoeff=0.8365;MQ=72.44;MQ0=0;MQRankSum=-0.541;QD=20.97;ReadPosRankSum=0.870;VQSLOD=5.8718;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,18:21:47.99:417,48,0	1/1:1,9:10:26.99:234,27,0	0/0:14,0:14:20.84:0,21,177	0/1:6,1:8:17.54:18,0,62	1/1:2,36:39:99:884,104,0	1/1:1,26:27:77.98:677,78,0	1/1:2,12:14:38.97:334,39,0	1/1:11,25:36:68.90:585,69,0	1/1:0,15:15:44.99:391,45,0	1/1:4,27:31:83.95:723,84,0	1/1:5,14:19:41.93:358,42,0	1/1:1,11:12:29.99:260,30,0	1/1:2,21:23:59.98:521,60,0	1/1:3,20:23:56.98:495,57,0	1/1:5,21:26:56.97:495,57,0	1/1:4,21:25:56.97:495,57,0	0/0:1,0:37:76.86:0,77,395	0/0:4,0:12:28.82:0,29,163	1/1:5,14:19:41.97:360,42,0	1/1:6,24:30:41.77:586,42,0	1/1:1,8:9:20.99:182,21,0	1/1:2,27:29:77.98:677,78,0	1/1:3,25:29:77.02:657,77,0	1/1:2,13:15:32.99:286,33,0	1/1:1,16:17:44.99:391,45,0	1/1:2,25:27:74.95:641,75,0	1/1:4,23:28:59.01:501,59,0	1/1:1,17:18:41.85:364,42,0
chr10	27880696	.	G	GCATGTTTAACAATGCCTCAACT	117178.34	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-7.334;DP=564;FS=9.850;HRun=0;HaplotypeScore=271.7168;InbreedingCoeff=0.9190;MQ=78.76;MQ0=0;MQRankSum=-10.573;QD=226.21;ReadPosRankSum=5.793;VQSLOD=3.6805;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,4:12:27.09:2248,27,0	1/1:1,6:7:18.06:1918,18,0	0/0:20,0:20:52.47:0,52,2473	0/0:25,0:25:65.37:0,65,2294	1/1:16,10:29:81.15:5768,81,0	1/1:10,13:25:69.24:6816,69,0	1/1:15,0:15:45.09:3034,45,0	1/1:21,0:21:60.19:4009,60,0	1/1:15,8:25:69.24:6574,69,0	1/1:19,8:30:87.30:7147,87,0	1/1:8,9:19:51.13:4142,51,0	1/1:13,12:33:78.27:7520,78,0	1/1:15,10:30:75.26:6958,75,0	1/1:18,6:26:69.24:5736,69,0	1/1:20,12:37:96.33:8623,96,0	1/1:6,9:18:48.16:4634,48,0	1/1:5,6:12:30.10:2970,30,0	0/0:1,0:1:0:0,0,0	1/1:11,3:17:51.12:3376,51,0	1/1:15,5:23:66.10:5014,66,0	1/1:9,1:13:30.10:2149,30,0	1/1:12,4:17:48.16:3527,48,0	1/1:14,6:22:57.15:4239,57,0	1/1:5,3:10:18.53:1309,19,0	1/1:13,9:22:63.17:4740,63,0	1/1:14,9:27:81.25:6701,81,0	1/1:10,8:20:57.20:5660,57,0	1/1:1,7:8:24.08:2364,24,0
chr10	27881131	.	TA	T	756.76	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=7.596;DP=489;FS=0.000;HRun=6;HaplotypeScore=45.0409;InbreedingCoeff=0.6929;MQ=64.61;MQ0=0;MQRankSum=-0.230;QD=18.92;ReadPosRankSum=0.291;VQSLOD=2.7753;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:63.20:0,63,826	0/0:5,0:5:15.05:0,15,197	0/1:7,0:7:15.10:15,0,75	0/0:2,0:2:2.99:0,3,23	0/0:22,0:22:63.20:0,63,824	0/0:11,0:11:33.11:0,33,434	0/0:10,0:10:27.09:0,27,355	0/0:33,0:33:93.29:0,93,1198	0/0:19,0:19:57.17:0,57,735	0/0:32,0:32:84.27:0,84,1102	0/0:20,0:20:60.20:0,60,790	0/0:14,0:14:42.12:0,42,538	0/0:25,0:25:66.21:0,66,868	0/0:21,0:21:60.18:0,60,775	0/0:24,0:23:69.22:0,69,907	0/0:18,0:18:48.16:0,48,631	1/1:1,27:28:39.33:767,39,0	1/1:1,4:5:9.02:97,9,0	0/0:13,0:13:27.09:0,27,355	0/0:16,0:16:45.15:0,45,592	0/0:13,0:13:36.10:0,36,458	0/0:12,0:12:33.11:0,33,434	0/0:14,0:14:39.13:0,39,512	0/0:7,0:7:21.07:0,21,276	0/0:34,0:34:90.29:0,90,1184	0/0:19,0:19:51.17:0,51,671	0/0:34,0:33:90.27:0,90,1167	0/0:10,0:10:30.10:0,30,388
chr10	27883811	.	CAAATAAAT	C	4475.41	PASS	AB=0.742;AC=36;AF=0.818;AN=44;BaseQRankSum=-5.004;DP=310;FS=2.421;HRun=0;HaplotypeScore=84.3212;InbreedingCoeff=0.3441;MQ=66.15;MQ0=2;MQRankSum=-3.961;QD=18.57;ReadPosRankSum=-0.851;VQSLOD=3.6945;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:7,3:10:7.91:213,0,8	1/1:2,1:3:3.01:75,3,0	./.	./.	0/0:9,3:12:0.89:0,1,2	1/1:10,12:21:30.10:672,30,0	1/1:6,2:8:6.02:112,6,0	1/1:33,0:31:3:27,3,0	./.	1/1:6,5:11:15.05:375,15,0	1/1:12,4:17:9.03:200,9,0	1/1:6,2:8:6.02:150,6,0	1/1:7,3:11:12.04:281,12,0	1/1:10,3:13:9.03:225,9,0	1/1:8,6:14:15.05:336,15,0	1/1:3,3:6:9.03:222,9,0	0/0:8,0:22:35.92:0,36,293	0/0:7,0:9:5.99:0,6,49	1/1:11,4:15:12.02:215,12,0	1/1:6,1:7:3.01:38,3,0	./.	1/1:8,1:9:3.01:75,3,0	1/1:5,2:7:6.02:110,6,0	./.	1/1:12,10:22:27.09:599,27,0	1/1:10,5:15:15.05:343,15,0	0/1:6,3:10:9.28:210,0,9	./.
chr10	27883910	.	GAC	G	388.33	PASS	AB=0.915;AC=14;AF=0.250;AN=56;BaseQRankSum=6.812;DP=564;FS=0.709;HRun=0;HaplotypeScore=79.7924;InbreedingCoeff=-0.1580;MQ=58.73;MQ0=10;MQRankSum=-0.197;QD=1.59;ReadPosRankSum=2.539;VQSLOD=1.1537;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,2:38:9.89:0,10,1009	0/1:9,0:9:19.89:20,0,147	0/0:27,0:12:13.29:0,13,189	0/0:34,0:10:15.05:0,15,211	0/0:19,1:20:6.58:0,7,553	0/1:26,5:31:99:108,0,787	0/0:24,0:24:34.42:0,34,699	0/1:30,3:33:46.73:47,0,659	0/1:14,2:16:46.66:47,0,454	0/1:14,0:14:34.98:35,0,403	0/1:17,3:20:32.08:32,0,452	0/1:18,5:23:90.84:91,0,559	0/1:15,2:17:41:41,0,324	0/0:17,2:18:12.62:0,13,675	0/0:18,1:19:2.50:0,3,617	0/1:15,3:18:64.50:65,0,468	0/1:18,0:21:5.06:12,0,5	1/1:11,0:11:7.97:34,8,0	0/0:11,0:11:18.82:0,19,323	0/0:16,1:17:6.58:0,7,553	0/0:24,0:24:57.18:0,57,861	0/0:12,1:13:0.16:0,0,446	0/1:14,1:18:2.44:2,0,406	0/0:16,0:16:33.11:0,33,509	0/0:18,1:19:18.63:0,19,743	0/0:25,0:25:21.65:0,22,767	0/0:14,0:14:33.11:0,33,520	0/1:12,1:13:2.42:2,0,424
chr10	27883925	.	ACACACACATG	A	812.27	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=4.394;DP=589;FS=7.346;HRun=0;HaplotypeScore=162.7540;InbreedingCoeff=0.9450;MQ=51.87;MQ0=17;MQRankSum=-4.998;QD=27.08;ReadPosRankSum=-2.663;VQSLOD=2.3262;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:78.24:0,78,3157	0/0:6,0:6:12.04:0,12,336	0/0:36,0:10:21.58:0,22,251	0/0:45,0:11:29.29:0,29,319	0/0:17,0:17:42.14:0,42,1610	0/0:25,0:25:69.24:0,69,2806	0/0:24,0:24:26.65:0,27,1734	0/0:32,0:30:38.50:0,38,1540	0/0:16,0:16:45.10:0,45,1652	0/0:20,0:19:51.06:0,51,1410	0/0:17,0:17:36.12:0,36,1309	0/0:23,0:23:60.10:0,60,1995	0/0:13,0:13:30.10:0,30,1145	0/0:18,0:17:48.16:0,48,1952	0/0:20,0:20:54.16:0,54,1850	0/0:17,0:17:45.15:0,45,1910	1/1:19,1:20:34.26:667,34,0	1/1:1,9:10:9.03:259,9,0	0/0:12,0:12:24.07:0,24,705	0/0:20,0:20:54.17:0,54,1732	0/0:30,0:29:69.24:0,69,2776	0/0:13,0:13:36.12:0,36,1263	0/0:17,0:17:26.32:0,26,973	0/0:18,0:18:42.14:0,42,1656	0/0:23,0:23:63.21:0,63,2224	0/0:31,0:30:81.08:0,81,2491	0/0:13,0:13:39.13:0,39,1512	0/0:13,0:13:18.25:0,18,1056
chr10	27883933	.	ATG	A	495.19	PASS	AB=0.929;AC=7;AF=0.125;AN=56;BaseQRankSum=7.138;DP=590;FS=2.807;HRun=0;HaplotypeScore=79.6835;InbreedingCoeff=0.5107;MQ=51.10;MQ0=20;MQRankSum=-2.326;QD=5.32;ReadPosRankSum=-1.745;VQSLOD=2.3544;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:36:68.55:0,69,1397	0/1:4,1:5:52.01:52,0,156	0/1:40,1:10:4.75:5,0,210	0/0:45,2:10:28.29:0,28,330	0/0:14,0:14:41.93:0,42,756	0/0:25,0:25:68.94:0,69,1153	0/0:22,0:22:35.68:0,36,1043	0/0:35,0:32:47.72:0,48,1237	0/0:15,0:15:19.56:0,20,696	0/0:19,0:18:49.39:0,49,883	0/0:16,0:16:38.51:0,39,637	0/0:23,0:23:31.36:0,31,976	0/0:10,0:10:27.81:0,28,489	0/0:20,0:19:51:0,51,905	0/0:22,0:22:58.44:0,58,1008	0/0:15,0:15:41.71:0,42,736	1/1:18,3:21:41.14:498,41,0	1/1:10,0:10:8.90:65,9,0	0/1:15,0:15:4.27:4,0,560	0/0:18,0:18:53.96:0,54,917	0/0:34,0:33:78.26:0,78,1457	0/0:14,0:14:23.86:0,24,639	0/0:13,0:13:29.37:0,29,471	0/0:19,0:19:34.25:0,34,819	0/0:22,0:22:63.08:0,63,1160	0/0:30,0:29:87.19:0,87,1521	0/0:13,0:13:39.13:0,39,719	0/0:13,1:14:4.81:0,5,597
chr10	27884910	.	T	TC	5793.18	PASS	AB=0.792;AC=50;AF=0.893;AN=56;BaseQRankSum=-4.265;DP=334;FS=4.233;HRun=1;HaplotypeScore=365.0354;InbreedingCoeff=0.1044;MQ=64.79;MQ0=0;MQRankSum=-1.724;QD=17.45;ReadPosRankSum=0.697;VQSLOD=3.3933;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,0:10:29.61:308,30,0	1/1:4,0:4:3:25,3,0	1/1:4,4:8:4.56:104,5,0	0/1:6,2:8:9.04:83,0,9	1/1:20,0:20:28.01:282,28,0	1/1:10,0:10:19.99:178,20,0	0/1:6,2:8:8.47:31,0,8	1/1:7,4:11:28.08:250,28,0	1/1:10,7:17:23.49:214,23,0	1/1:6,2:8:16.02:140,16,0	1/1:17,0:17:29.31:242,29,0	1/1:13,0:13:27.05:264,27,0	1/1:14,3:17:21.72:317,22,0	1/1:19,4:23:51.07:510,51,0	1/1:20,0:20:29.54:382,30,0	1/1:12,0:12:30.28:262,30,0	1/1:7,0:7:12.82:100,13,0	0/0:2,0:2:1.55:0,2,4	1/1:6,2:8:23.11:196,23,0	1/1:18,4:22:31.29:304,31,0	0/1:4,2:6:2.47:79,0,2	0/1:7,2:8:5.97:92,0,6	1/1:11,2:13:24.79:248,25,0	1/1:5,2:7:11.98:117,12,0	1/1:16,0:16:41.76:327,42,0	1/1:15,2:17:34.56:305,35,0	1/1:20,0:20:48.88:428,49,0	1/1:1,0:1:2.50:9,2,0
chr10	27885347	.	AC	A	1223.02	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=4.591;DP=603;FS=7.043;HRun=1;HaplotypeScore=72.0376;InbreedingCoeff=0.9597;MQ=51.25;MQ0=5;MQRankSum=2.766;QD=34.94;ReadPosRankSum=0.222;VQSLOD=3.4378;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:54.17:0,54,823	0/0:4,0:4:9.03:0,9,144	0/0:19,0:7:21.07:0,21,317	0/0:18,0:14:25.89:0,26,488	0/0:35,0:35:99:0,102,1588	0/0:18,0:18:51.16:0,51,748	0/0:18,0:18:54.18:0,54,839	0/0:33,0:29:84.28:0,84,1310	0/0:18,0:18:48.15:0,48,728	0/0:25,0:24:72.25:0,72,1151	0/0:24,0:24:69.23:0,69,1066	0/0:25,0:25:72.23:0,72,1126	0/0:30,0:30:81.27:0,81,1265	0/0:28,0:28:81.26:0,81,1233	0/0:18,0:18:54.18:0,54,825	0/0:15,0:15:45.15:0,45,718	1/1:0,28:28:81.27:1132,81,0	1/1:1,6:7:15.05:210,15,0	0/0:26,0:21:57.11:0,57,853	0/0:22,0:22:63.21:0,63,991	0/0:20,0:20:57.19:0,57,897	0/0:19,0:19:51.14:0,51,766	0/0:16,0:16:42.14:0,42,632	0/0:23,0:23:60.18:0,60,933	0/0:20,0:20:51.17:0,51,804	0/0:33,0:33:99:0,99,1531	0/0:23,0:23:63.21:0,63,983	0/0:12,0:10:30.10:0,30,473
chr10	27886259	.	A	AT	659.39	PASS	AB=0.550;AC=3;AF=0.054;AN=56;BaseQRankSum=7.371;DP=602;FS=0.916;HRun=1;HaplotypeScore=62.8675;InbreedingCoeff=0.6576;MQ=69.83;MQ0=0;MQRankSum=-6.503;QD=26.38;ReadPosRankSum=1.728;VQSLOD=3.5684;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,108,1384	0/0:8,0:8:24.08:0,24,312	0/0:23,0:22:57.16:0,57,706	0/0:13,0:13:33.10:0,33,413	0/0:27,0:27:75.21:0,75,955	0/0:31,0:31:93.30:0,93,1207	0/0:17,0:17:48.14:0,48,605	0/0:25,0:25:63.19:0,63,804	0/0:16,0:16:47.89:0,48,596	0/0:22,0:22:66.21:0,66,857	0/0:26,0:26:78.23:0,78,975	0/0:16,0:16:48.15:0,48,610	0/0:23,0:23:69.22:0,69,896	0/0:28,0:28:81.24:0,81,1035	0/0:26,0:26:75.24:0,75,974	0/0:28,0:28:78.25:0,78,1013	1/1:1,13:14:39.09:531,39,0	0/1:2,9:11:16.06:234,0,16	0/0:23,0:23:69.22:0,69,884	0/0:28,0:28:84.26:0,84,1075	0/0:16,0:16:45.13:0,45,569	0/0:17,0:17:48.16:0,48,622	0/0:27,0:27:72.23:0,72,934	0/0:18,0:18:54.16:0,54,686	0/0:25,0:25:69.21:0,69,881	0/0:23,0:23:69.21:0,69,882	0/0:22,0:22:60.19:0,60,776	0/0:11,0:11:33.11:0,33,428
chr10	27886344	.	CT	C	8029.74	PASS	AB=0.857;AC=53;AF=0.946;AN=56;BaseQRankSum=-2.100;DP=543;FS=0.000;HRun=12;HaplotypeScore=63.3865;InbreedingCoeff=0.2056;MQ=76.41;MQ0=0;MQRankSum=-2.805;QD=14.79;ReadPosRankSum=4.070;VQSLOD=5.4934;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,8:14:8.61:175,9,0	1/1:3,11:16:33.92:244,34,0	0/1:18,0:17:0.85:1,0,130	0/1:12,0:12:30.09:42,0,30	1/1:5,23:30:27.31:376,27,0	1/1:5,20:26:34.32:440,34,0	1/1:2,12:14:32.85:255,33,0	1/1:6,17:24:44.76:348,45,0	1/1:4,10:14:29.16:231,29,0	1/1:7,20:27:53.74:418,54,0	1/1:3,13:17:37.89:285,38,0	1/1:5,11:16:26.85:209,27,0	1/1:3,17:21:52.83:400,53,0	1/1:4,16:20:44.80:344,45,0	1/1:4,14:18:38.84:302,39,0	1/1:8,15:24:40.83:308,41,0	1/1:1,17:18:47.82:371,48,0	1/1:2,8:13:30.01:204,30,0	1/1:5,12:17:35.84:279,36,0	1/1:6,15:22:37.82:284,38,0	1/1:3,12:15:35.85:279,36,0	1/1:1,12:13:29.87:232,30,0	1/1:7,11:19:29.36:216,29,0	0/1:2,6:8:12.52:98,0,13	1/1:6,25:32:43.30:509,43,0	1/1:6,13:20:37.87:284,38,0	1/1:6,23:31:69.77:522,70,0	1/1:5,19:24:32.29:373,32,0
chr10	27887625	.	A	AC	16819.84	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-7.679;DP=416;FS=4.090;HRun=0;HaplotypeScore=37.2085;InbreedingCoeff=0.9254;MQ=81.98;MQ0=0;MQRankSum=-7.500;QD=43.24;ReadPosRankSum=5.534;VQSLOD=4.5127;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,18:18:48.16:767,48,0	1/1:0,3:3:9.03:144,9,0	0/0:8,0:8:21.94:0,22,251	0/0:19,0:19:40.06:0,40,495	1/1:0,28:28:78.27:1241,78,0	1/1:0,22:22:60.20:959,60,0	1/1:0,9:9:21.07:336,21,0	1/1:0,33:33:99:1482,99,0	1/1:0,7:7:21.07:335,21,0	1/1:0,17:17:45.15:720,45,0	1/1:1,18:19:48.10:767,48,0	1/1:0,12:12:33.11:527,33,0	1/1:0,19:19:51.17:815,51,0	1/1:1,14:15:30.82:657,31,0	1/1:0,12:12:36.12:575,36,0	1/1:0,17:17:48.16:767,48,0	1/1:0,15:15:36.12:561,36,0	1/1:0,11:11:27.09:430,27,0	1/1:1,15:16:45.15:717,45,0	1/1:1,14:15:39.13:623,39,0	1/1:0,17:17:45.15:719,45,0	1/1:0,3:3:9.03:144,9,0	1/1:0,8:8:18.06:287,18,0	1/1:0,5:5:15.05:240,15,0	1/1:0,13:13:33.11:527,33,0	1/1:0,14:14:42.14:661,42,0	1/1:0,30:30:81.28:1293,81,0	1/1:0,11:11:33.11:527,33,0
chr10	27888776	.	T	TAGACAGCTGGTAACAAGGTGTCAT	1576.62	PASS	AB=0.689;AC=16;AF=0.889;AN=18;BaseQRankSum=-2.049;DP=42;FS=11.187;HRun=0;HaplotypeScore=41.7997;MQ=141.78;MQ0=0;MQRankSum=-0.962;QD=50.86;ReadPosRankSum=-0.711;VQSLOD=0.3830;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/1:2,1:6:16.91:633,0,17	0/1:5,0:7:22.16:513,0,22	./.	1/1:1,0:1:3.01:50,3,0	./.	1/1:5,0:5:15.03:223,15,0	./.	1/1:2,0:2:3:25,3,0	./.	./.	./.	./.	./.	1/1:3,0:3:3:26,3,0	./.	./.	./.	./.	./.	1/1:3,0:3:6:85,6,0	./.	./.	./.	1/1:2,0:2:3.01:54,3,0	1/1:2,0:2:3.01:50,3,0	./.
chr10	27889326	.	GAA	G	142.16	PASS	AB=0.970;AC=8;AF=0.154;AN=52;BaseQRankSum=0.290;DP=343;FS=2.215;HRun=3;HaplotypeScore=55.7965;InbreedingCoeff=0.0346;MQ=24.83;MQ0=127;MQRankSum=-0.143;QD=1.37;ReadPosRankSum=3.067;VQSLOD=-0.7387;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:18,0:6:33.73:34,0,66	0/0:8,0:7:17.41:0,17,151	./.	./.	0/0:16,0:9:23.98:0,24,240	0/0:12,0:7:17.95:0,18,212	0/0:13,0:7:14.85:0,15,161	0/1:17,2:17:39.07:39,0,469	0/0:7,0:4:5.99:0,6,65	0/0:16,0:8:16.93:0,17,232	0/0:10,0:6:18:0,18,200	0/0:11,0:8:23.24:0,23,228	0/0:10,0:5:6.87:0,7,48	0/0:7,0:4:5.99:0,6,64	0/0:13,0:10:21.37:0,21,225	0/0:9,0:4:12.02:0,12,165	0/0:10,0:2:6.02:0,6,86	0/0:8,0:3:8.92:0,9,63	0/0:24,0:11:23.53:0,24,320	0/0:17,0:14:38.63:0,39,443	0/1:10,1:3:34.54:40,0,35	0/0:8,0:7:18.04:0,18,274	0/1:8,0:4:31.26:31,0,51	1/1:17,1:4:6.02:76,6,0	0/1:13,0:10:0.24:0,0,102	0/0:19,0:12:32.71:0,33,286	0/0:21,0:10:23.63:0,24,246	0/1:17,0:8:46.72:47,0,64
chr10	27889445	.	T	TA	9414.52	PASS	AB=0.875;AC=50;AF=0.893;AN=56;BaseQRankSum=-5.351;DP=476;FS=0.000;HRun=9;HaplotypeScore=62.4453;InbreedingCoeff=0.5817;MQ=61.82;MQ0=4;MQRankSum=0.004;QD=21.64;ReadPosRankSum=2.803;VQSLOD=5.5912;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,6:12:23.73:243,24,0	1/1:0,6:6:18.05:199,18,0	0/0:34,0:14:6.51:0,7,173	0/1:31,0:14:9.96:10,0,66	1/1:6,22:28:22.54:467,23,0	1/1:3,18:21:48.13:531,48,0	1/1:0,11:11:30.08:328,30,0	1/1:9,22:30:63.13:682,63,0	1/1:1,8:9:15.04:166,15,0	1/1:5,18:23:51.07:525,51,0	1/1:4,16:19:45.04:479,45,0	1/1:1,14:15:33.09:363,33,0	1/1:2,14:16:30.08:332,30,0	1/1:1,9:10:21.06:232,21,0	1/1:4,14:18:39.11:431,39,0	1/1:1,13:14:39.11:430,39,0	0/0:0,0:6:12.22:0,12,36	0/1:0,0:2:0.97:20,0,1	1/1:9,16:23:54.05:562,54,0	1/1:4,26:30:52.02:761,52,0	1/1:1,11:12:27.07:299,27,0	1/1:1,4:5:8.94:83,9,0	1/1:8,11:18:4.01:264,4,0	1/1:1,6:7:15.04:166,15,0	1/1:2,10:12:27.07:299,27,0	1/1:4,19:23:34.11:603,34,0	1/1:4,12:16:16.67:376,17,0	1/1:2,16:18:51.14:564,51,0
chr10	27889471	.	AC	A	200.99	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=2.291;DP=475;FS=19.735;HRun=3;HaplotypeScore=75.1039;InbreedingCoeff=0.8747;MQ=62.29;MQ0=6;MQRankSum=-2.923;QD=12.56;ReadPosRankSum=1.085;VQSLOD=1.1904;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:24.82:0,25,383	0/0:11,0:11:30.05:0,30,347	0/0:27,0:11:4.45:0,4,194	0/0:20,0:9:17.46:0,17,159	0/0:17,0:17:41.87:0,42,451	0/0:18,0:18:51.13:0,51,634	0/0:12,0:12:16.60:0,17,268	0/0:32,0:32:77.42:0,77,939	0/0:11,0:11:21.04:0,21,245	0/0:19,0:19:57.12:0,57,665	0/0:20,0:19:47.94:0,48,595	0/0:13,0:13:33.04:0,33,379	0/0:21,1:22:53.95:0,54,572	0/0:11,0:11:21.03:0,21,240	0/0:20,0:20:57.13:0,57,687	0/0:9,0:9:24.08:0,24,311	1/1:0,10:10:18.06:220,18,0	1/1:2,4:6:9:92,9,0	0/0:25,0:24:39.75:0,40,586	0/0:30,0:30:75.14:0,75,913	0/0:14,0:14:24.07:0,24,301	0/0:7,0:7:18.03:0,18,207	0/0:18,1:18:38.78:0,39,426	0/0:7,0:7:18.04:0,18,219	0/0:15,0:15:36.57:0,37,457	0/0:21,0:21:60.48:0,60,669	0/0:26,0:26:58.38:0,58,679	0/0:17,0:17:35.99:0,36,469
chr10	27891347	.	T	TTTC	25991.77	PASS	AB=0.636;AC=51;AF=0.911;AN=56;BaseQRankSum=-7.882;DP=527;FS=13.495;HRun=0;HaplotypeScore=58.9499;InbreedingCoeff=0.7605;MQ=78.66;MQ0=0;MQRankSum=-8.056;QD=52.19;ReadPosRankSum=4.227;VQSLOD=6.3831;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,9:12:18.06:395,18,0	1/1:1,13:14:39.13:860,39,0	0/0:15,0:15:45.15:0,45,720	0/0:14,0:14:31.79:0,32,468	1/1:1,25:27:72.09:1431,72,0	1/1:3,19:22:54.18:1151,54,0	1/1:1,7:8:21.07:463,21,0	1/1:4,20:26:66.20:1353,66,0	1/1:2,15:18:54.19:1168,54,0	1/1:4,19:23:60.21:1317,60,0	1/1:2,16:18:51.17:1024,51,0	1/1:3,22:26:57.20:1235,57,0	1/1:3,25:28:72.25:1575,72,0	1/1:1,19:21:48.16:1059,48,0	1/1:0,12:12:33.11:716,33,0	1/1:2,19:21:51.04:1006,51,0	1/1:0,5:5:15.05:330,15,0	0/1:3,4:7:25.08:249,0,25	1/1:5,14:20:48.15:1004,48,0	1/1:4,28:33:84.22:1737,84,0	1/1:2,13:17:33.11:717,33,0	1/1:5,10:16:39.05:770,39,0	1/1:2,24:27:60.21:1324,60,0	1/1:2,13:15:30.10:659,30,0	1/1:2,16:19:42.04:914,42,0	1/1:3,27:30:84.29:1832,84,0	1/1:4,23:28:66.23:1436,66,0	1/1:0,4:4:12.04:265,12,0
chr10	27892755	.	C	CT	1087.95	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.347;DP=490;FS=2.428;HRun=4;HaplotypeScore=46.2015;InbreedingCoeff=0.9887;MQ=82.93;MQ0=0;MQRankSum=-4.836;QD=28.63;ReadPosRankSum=2.637;VQSLOD=3.3090;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:8:24.07:0,24,272	0/0:6,0:6:15.04:0,15,170	0/0:19,0:19:48.12:0,48,532	0/0:12,0:12:33.52:0,34,356	0/0:31,0:31:90.26:0,90,1020	0/0:17,0:17:51.15:0,51,579	0/0:12,0:12:27.07:0,27,306	0/0:30,0:30:78.20:0,78,864	0/0:13,0:13:39.11:0,39,442	0/0:16,0:16:45.13:0,45,510	0/0:29,0:29:87.25:0,87,985	0/0:12,0:12:36.10:0,36,408	0/0:16,0:16:48.14:0,48,544	0/0:16,0:16:45.13:0,45,510	0/0:15,0:15:42.12:0,42,476	0/0:16,0:16:45.13:0,45,511	1/1:4,22:26:63.21:846,63,0	1/1:0,12:12:27.09:363,27,0	0/0:21,0:21:51.14:0,51,578	0/0:18,0:18:54.14:0,54,603	0/0:18,0:18:48.14:0,48,544	0/0:10,0:10:30.09:0,30,340	0/0:13,0:13:39.11:0,39,442	0/0:9,0:9:27.08:0,27,306	0/0:15,0:15:45.13:0,45,510	0/0:32,0:32:81.23:0,81,919	0/0:33,0:33:96.26:0,96,1078	0/0:15,0:15:45.13:0,45,510
chr10	27892939	.	AT	A	10591.44	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=0.328;DP=475;FS=2.096;HRun=8;HaplotypeScore=49.4062;InbreedingCoeff=0.9725;MQ=81.21;MQ0=0;MQRankSum=-0.163;QD=25.16;ReadPosRankSum=2.134;VQSLOD=5.5900;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,5:5:12.02:116,12,0	1/1:0,9:9:26.99:251,27,0	0/0:13,1:14:20.96:0,21,252	0/0:11,0:10:21.06:0,21,241	1/1:0,24:24:66.10:637,66,0	1/1:1,26:27:75.12:724,75,0	1/1:1,10:11:24.04:232,24,0	1/1:6,26:32:78.06:731,78,0	1/1:2,9:11:27.04:261,27,0	1/1:1,16:17:48.05:457,48,0	1/1:4,15:19:42.06:406,42,0	1/1:2,13:15:33.05:319,33,0	1/1:2,19:21:57.09:550,57,0	1/1:2,12:14:33.05:319,33,0	1/1:1,7:8:21.03:203,21,0	1/1:0,11:11:33.05:319,33,0	0/0:20,0:20:51.16:0,51,614	0/0:9,0:8:27.04:0,27,309	1/1:2,15:17:45.07:434,45,0	1/1:0,27:27:75.11:724,75,0	1/1:1,5:6:15.02:145,15,0	1/1:0,18:18:54.09:522,54,0	1/1:1,24:25:69.11:666,69,0	1/1:4,7:11:21.03:203,21,0	1/1:2,21:23:60.09:579,60,0	1/1:1,26:27:78.12:751,78,0	1/1:3,34:37:96.15:927,96,0	1/1:0,6:6:12.02:116,12,0
chr10	27893407	.	AT	A	12454.76	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=1.437;DP=556;FS=1.829;HRun=8;HaplotypeScore=56.4659;InbreedingCoeff=0.9297;MQ=86.80;MQ0=0;MQRankSum=-4.989;QD=25.26;ReadPosRankSum=5.487;VQSLOD=5.1964;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,4:6:12.02:116,12,0	1/1:1,5:6:9.01:87,9,0	0/0:23,0:24:47.02:0,47,609	0/0:17,0:17:32.94:0,33,358	1/1:2,24:26:72.11:695,72,0	1/1:0,27:27:78.13:753,78,0	1/1:3,13:16:36.06:348,36,0	1/1:4,33:37:99:950,99,0	1/1:1,20:21:57.09:550,57,0	1/1:6,22:28:69.10:666,69,0	1/1:1,22:23:66.02:624,66,0	1/1:0,21:21:54.09:522,54,0	1/1:0,28:28:75.12:724,75,0	1/1:1,17:18:48.08:464,48,0	1/1:0,20:20:54.09:522,54,0	1/1:0,14:14:36.06:348,36,0	0/0:11,0:11:33.10:0,33,398	0/0:11,0:11:30.02:0,30,330	1/1:3,17:20:51.05:482,51,0	1/1:0,23:23:66.10:637,66,0	1/1:0,18:18:51.08:493,51,0	1/1:3,18:21:54.08:520,54,0	1/1:0,24:24:69:666,69,0	1/1:0,15:15:36.06:348,36,0	1/1:1,28:29:78.12:753,78,0	1/1:1,16:17:48.08:463,48,0	1/1:3,28:31:72.11:695,72,0	1/1:3,1:4:3:29,3,0
chr10	27893808	.	T	TG	17230.62	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=11.701;DP=567;FS=3.064;HRun=1;HaplotypeScore=143.5933;InbreedingCoeff=0.9952;MQ=84.41;MQ0=0;MQRankSum=-7.700;QD=34.32;ReadPosRankSum=4.601;VQSLOD=4.5203;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,8:8:24.04:270,24,0	1/1:1,5:6:17.98:205,18,0	0/0:25,0:25:72.17:0,72,930	0/0:17,0:17:39.81:0,40,491	1/1:4,21:26:72.14:810,72,0	1/1:2,29:31:90.13:998,90,0	1/1:2,9:11:33.08:397,33,0	1/1:5,30:35:99:1172,102,0	1/1:3,14:17:50.30:559,50,0	1/1:2,19:21:63.01:786,63,0	1/1:1,21:22:66.07:767,66,0	1/1:1,21:22:66.11:771,66,0	1/1:3,25:28:84.10:1008,84,0	1/1:1,26:27:81.15:965,81,0	1/1:1,17:18:53.99:674,54,0	1/1:2,20:22:63.09:744,63,0	0/0:12,0:12:36.09:0,36,483	0/0:11,0:11:33.08:0,33,436	1/1:1,14:15:45.11:538,45,0	1/1:3,27:30:84.21:1030,84,0	1/1:3,18:21:56.92:649,57,0	1/1:0,18:18:54.08:616,54,0	1/1:0,17:17:51.06:570,51,0	1/1:0,7:7:21.06:259,21,0	1/1:2,34:36:99:1209,108,0	1/1:1,25:26:78.21:954,78,0	1/1:2,28:30:90.12:991,90,0	1/1:1,7:8:24.06:289,24,0
chr10	27893812	.	ACC	A	18143.24	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=11.679;DP=572;FS=4.566;HRun=2;HaplotypeScore=154.3930;InbreedingCoeff=0.9931;MQ=84.49;MQ0=0;MQRankSum=-7.368;QD=35.79;ReadPosRankSum=4.737;VQSLOD=5.1084;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,8:8:24.06:281,24,0	1/1:0,5:5:15.04:192,15,0	0/0:26,0:26:78.27:0,78,1500	0/0:16,0:16:45.14:0,45,839	1/1:4,21:26:75.08:887,75,0	1/1:0,29:29:84.20:989,84,0	1/1:2,9:11:33.09:415,33,0	1/1:3,30:33:99:1242,99,0	1/1:1,14:15:45.05:517,45,0	1/1:0,23:23:69.20:912,69,0	1/1:0,22:22:66.17:815,66,0	1/1:3,21:24:69.16:846,69,0	1/1:2,25:27:81.18:1016,81,0	1/1:1,26:27:81.20:1008,81,0	1/1:1,17:18:54.09:681,54,0	1/1:0,20:24:63.07:744,63,0	0/0:13,0:13:39.13:0,39,765	0/0:10,0:10:30.10:0,30,607	1/1:1,15:16:45.09:548,45,0	1/1:0,30:30:87.25:1114,87,0	1/1:1,18:19:51.10:652,51,0	1/1:0,19:19:54.12:639,54,0	1/1:0,19:19:51.09:598,51,0	1/1:1,7:8:24.07:315,24,0	1/1:5,34:39:99:1380,114,0	1/1:2,25:27:81.22:1027,81,0	1/1:2,28:30:90.20:1053,90,0	1/1:1,7:8:21.07:272,21,0
chr10	27894554	.	CATATATATATATATATAT	C	11263.24	PASS	AB=0.740;AC=46;AF=0.958;AN=48;DP=400;FS=0.000;HRun=0;HaplotypeScore=182.9389;InbreedingCoeff=0.2254;MQ=56.40;MQ0=1;QD=29.48;VQSLOD=3.6750;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:12,8:20:6.02:296,6,0	1/1:3,8:11:6.02:297,6,0	./.	0/1:15,0:6:0:0,0,0	1/1:5,20:25:15.05:680,15,0	1/1:7,16:23:6.02:295,6,0	1/1:2,6:8:3.01:148,3,0	1/1:16,14:30:41.98:471,42,0	1/1:5,6:11:3.01:148,3,0	1/1:7,15:22:41.70:1407,42,0	1/1:5,16:21:15.05:741,15,0	1/1:4,9:14:9.03:325,9,0	1/1:2,4:6:6.02:297,6,0	1/1:6,6:12:12.04:593,12,0	1/1:4,5:9:6.02:297,6,0	1/1:6,7:13:12.04:593,12,0	1/1:6,0:14:9.03:377,9,0	1/1:5,0:13:6.02:225,6,0	1/1:9,6:15:18:411,18,0	1/1:8,14:22:18.06:890,18,0	./.	./.	0/1:1,6:7:0:0,0,0	./.	1/1:6,15:21:12.04:592,12,0	1/1:4,10:14:27.05:909,27,0	1/1:12,15:28:18.06:827,18,0	1/1:2,5:7:9.03:445,9,0
chr10	27896135	.	A	AT	17254.02	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-12.924;DP=681;FS=5.602;HRun=8;HaplotypeScore=70.3491;InbreedingCoeff=0.9716;MQ=73.79;MQ0=0;MQRankSum=-4.031;QD=29.60;ReadPosRankSum=3.208;VQSLOD=4.8985;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,31:34:81.24:935,81,0	1/1:1,14:15:39.12:450,39,0	0/0:27,0:27:55.94:0,56,500	0/0:18,0:18:6.81:0,7,291	1/1:1,41:43:99:1400,123,0	1/1:2,23:25:72.18:817,72,0	1/1:2,12:14:36.11:416,36,0	1/1:4,19:23:57.17:658,57,0	1/1:1,17:18:51.15:589,51,0	1/1:3,33:36:96.26:1096,96,0	1/1:1,27:28:78.23:900,78,0	1/1:3,18:21:48.14:554,48,0	1/1:4,18:22:29.70:596,30,0	1/1:1,25:26:63.19:727,63,0	1/1:3,25:28:69.21:796,69,0	1/1:1,24:24:60.18:693,60,0	0/0:31,0:31:61.81:0,62,431	0/0:21,0:21:18.80:0,19,261	1/1:3,16:20:30:544,30,0	1/1:1,32:34:99:1122,99,0	1/1:0,18:18:54.16:623,54,0	1/1:2,18:20:48.14:554,48,0	1/1:3,11:14:30.09:346,30,0	1/1:0,21:21:60.18:692,60,0	1/1:6,27:33:75.22:866,75,0	1/1:4,25:29:75.22:866,75,0	1/1:3,24:27:40.28:704,40,0	1/1:0,9:9:27.08:311,27,0
chr10	27896896	.	G	GT	6360.86	PASS	AB=1.000;AC=47;AF=0.839;AN=56;BaseQRankSum=7.648;DP=637;FS=4.516;HRun=0;HaplotypeScore=169.7654;InbreedingCoeff=0.8549;MQ=69.03;MQ0=0;MQRankSum=-0.083;QD=11.46;ReadPosRankSum=4.600;VQSLOD=5.3199;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:45,2:47:99:591,106,0	1/1:21,0:21:36.10:221,36,0	0/0:21,0:21:60.18:0,60,797	0/0:21,0:20:53.97:0,54,717	1/1:20,0:20:38.45:227,38,0	1/1:24,0:24:49.51:248,50,0	1/1:21,0:21:44.86:348,45,0	1/1:29,0:29:44.18:298,44,0	1/1:19,0:19:47.81:296,48,0	1/1:24,1:25:72.62:480,73,0	0/1:22,0:22:10.67:120,0,11	1/1:15,0:15:35.24:180,35,0	1/1:39,0:39:50.67:369,51,0	1/1:24,1:25:28.92:291,29,0	1/1:21,1:22:42.92:268,43,0	1/1:17,0:17:42.33:243,42,0	0/0:23,0:23:66.19:0,66,886	0/0:17,0:17:46.02:0,46,613	1/1:14,0:13:25.28:196,25,0	1/1:22,0:22:32.61:239,33,0	1/1:21,0:21:37.82:187,38,0	1/1:30,0:30:45.38:286,45,0	1/1:30,0:30:6.87:182,7,0	1/1:12,1:13:22.51:172,23,0	1/1:22,2:24:49.92:325,50,0	1/1:22,0:22:50.56:319,51,0	1/1:21,0:21:36.58:178,37,0	1/1:12,0:12:24.99:97,25,0
chr10	27898248	.	C	CT	18445.10	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-10.956;DP=670;FS=0.475;HRun=6;HaplotypeScore=59.5969;InbreedingCoeff=0.9827;MQ=59.92;MQ0=0;MQRankSum=6.005;QD=31.64;ReadPosRankSum=1.157;VQSLOD=5.2844;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,25:27:69.18:847,69,0	1/1:1,4:5:12.04:151,12,0	0/0:20,0:18:42.08:0,42,422	0/0:13,0:11:26.97:0,27,260	1/1:4,21:25:57.18:715,57,0	1/1:2,28:30:75.24:943,75,0	1/1:1,28:29:75.24:944,75,0	1/1:6,27:33:81.23:992,81,0	1/1:1,24:25:72.23:906,72,0	1/1:4,26:30:78.25:981,78,0	1/1:2,23:25:63.12:757,63,0	1/1:1,25:26:75.24:944,75,0	1/1:2,24:26:60.19:755,60,0	1/1:1,22:23:60.19:755,60,0	1/1:1,35:36:99:1262,102,0	1/1:0,25:25:69.22:868,69,0	0/0:35,0:35:84.12:0,84,844	0/0:19,0:19:47.37:0,47,478	1/1:7,16:21:41.99:449,42,0	1/1:4,27:31:81.23:1002,81,0	1/1:0,15:15:39.12:491,39,0	1/1:3,18:22:57.14:698,57,0	1/1:5,22:27:63.20:793,63,0	1/1:2,14:16:39.12:491,39,0	1/1:2,16:18:45.14:566,45,0	1/1:0,25:25:75.22:929,75,0	1/1:2,34:37:84.26:1057,84,0	1/1:0,4:4:12.04:151,12,0
chr10	27898378	.	T	TA	1566.67	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=4.581;DP=690;FS=0.000;HRun=1;HaplotypeScore=70.6719;InbreedingCoeff=0.9163;MQ=60.86;MQ0=1;MQRankSum=1.127;QD=34.81;ReadPosRankSum=1.830;VQSLOD=3.7541;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:60.15:0,60,733	0/0:12,0:12:33.11:0,33,428	0/0:22,0:18:45.10:0,45,540	0/0:21,0:20:32.14:0,32,573	0/0:44,0:44:99:0,129,1612	0/0:24,0:24:72.21:0,72,896	0/0:12,0:12:36.10:0,36,453	0/0:30,0:30:90.25:0,90,1096	0/0:23,0:23:66.20:0,66,841	0/0:29,0:29:78.22:0,78,953	0/0:26,0:26:75.22:0,75,946	0/0:27,0:27:72.21:0,72,907	0/0:31,0:31:90.24:0,90,1111	0/0:24,0:24:66.19:0,66,830	0/0:29,0:29:84.23:0,84,1037	0/0:27,0:27:78.24:0,78,997	1/1:1,26:27:42.12:1072,42,0	1/1:0,18:18:42.14:616,42,0	0/0:20,0:19:54.14:0,54,671	0/0:32,0:32:93.27:0,93,1167	0/0:32,0:32:93.22:0,93,1130	0/0:25,0:25:75.24:0,75,972	0/0:23,0:23:69.19:0,69,854	0/0:26,0:26:78.25:0,78,1011	0/0:26,0:26:75.23:0,75,959	0/0:28,0:28:84.26:0,84,1065	0/0:30,0:30:90.26:0,90,1127	0/0:1,0:1:3.01:0,3,39
chr10	27899210	.	TG	T	12460.81	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-3.165;DP=468;FS=6.314;HRun=2;HaplotypeScore=121.9171;InbreedingCoeff=0.9672;MQ=57.58;MQ0=1;MQRankSum=0.893;QD=29.32;ReadPosRankSum=-1.575;VQSLOD=3.7568;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,8:13:18.81:333,19,0	1/1:1,10:11:30.04:368,30,0	0/0:9,0:7:18.02:0,18,235	0/0:7,0:6:14.08:0,14,178	1/1:10,16:30:66.82:796,67,0	1/1:4,11:17:43.17:499,43,0	1/1:2,6:9:23.39:259,23,0	1/1:7,14:25:65.02:679,65,0	1/1:1,15:15:42.04:502,42,0	1/1:0,13:13:39.09:485,39,0	1/1:1,20:22:55.67:618,56,0	1/1:0,16:17:36.12:464,36,0	1/1:0,17:19:45.05:541,45,0	1/1:0,12:13:27.03:328,27,0	1/1:0,13:14:39.07:483,39,0	1/1:0,14:16:38.29:442,38,0	0/0:18,0:18:51.04:0,51,486	0/0:7,0:7:15.01:0,15,134	1/1:0,23:26:74.91:814,75,0	1/1:9,14:23:52.95:641,53,0	1/1:0,8:8:20.95:231,21,0	1/1:2,9:12:36:414,36,0	1/1:0,25:25:60.01:697,60,0	1/1:3,9:12:26.98:309,27,0	1/1:1,21:25:61.62:692,62,0	1/1:6,15:22:50:604,50,0	1/1:0,31:33:92.25:1147,92,0	1/1:0,3:3:9.03:116,9,0
chr10	27899212	.	G	GT	5526.06	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-0.426;DP=490;FS=5.419;HRun=9;HaplotypeScore=149.5944;InbreedingCoeff=0.8720;MQ=57.04;MQ0=3;MQRankSum=-0.169;QD=11.78;ReadPosRankSum=1.079;VQSLOD=2.9839;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:14:9.38:103,9,0	1/1:12,0:12:29.12:173,29,0	0/0:10,0:7:17.55:0,18,133	0/0:11,0:6:8.85:0,9,97	1/1:28,0:28:48.29:249,48,0	1/1:17,0:17:22.06:143,22,0	1/1:8,0:8:15.53:87,16,0	1/1:25,0:25:47.13:278,47,0	1/1:16,0:15:34.11:172,34,0	1/1:13,0:13:35.74:221,36,0	1/1:22,0:22:34.04:218,34,0	1/1:17,0:17:34.60:196,35,0	1/1:22,0:22:39.52:211,40,0	1/1:14,0:14:26.01:154,26,0	1/1:17,0:17:43.18:256,43,0	1/1:16,0:16:29.57:164,30,0	1/1:3,15:18:42.11:465,42,0	1/1:1,6:7:11.07:131,11,0	1/1:29,0:28:62.36:380,62,0	1/1:25,0:25:48.75:328,49,0	1/1:9,0:9:17.61:106,18,0	1/1:12,0:12:28.11:146,28,0	1/1:25,0:25:45.62:226,46,0	1/1:12,0:12:19.82:103,20,0	1/1:26,0:25:43.50:257,44,0	1/1:26,0:26:37.05:269,37,0	1/1:34,0:34:83.49:448,83,0	1/1:5,0:5:8.51:43,9,0
chr10	27899315	.	GT	G	422.69	PASS	AB=0.716;AC=5;AF=0.089;AN=56;BaseQRankSum=6.043;DP=573;FS=3.159;HRun=11;HaplotypeScore=67.1283;InbreedingCoeff=0.4488;MQ=64.84;MQ0=2;MQRankSum=-0.324;QD=8.13;ReadPosRankSum=1.199;VQSLOD=2.4821;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:10,1:11:5.35:0,5,237	0/0:11,0:11:30.96:0,31,322	0/1:12,2:9:32.60:33,0,96	0/0:21,0:14:28.14:0,28,251	0/0:27,1:29:50.85:0,51,724	0/0:35,0:35:93.16:0,93,957	0/0:16,0:16:33.08:0,33,352	0/0:35,1:36:46.64:0,47,637	0/0:22,0:22:57.06:0,57,579	0/0:19,0:19:48.12:0,48,511	0/0:23,1:25:23.28:0,23,603	0/0:18,0:18:45.09:0,45,466	0/0:17,0:17:42.09:0,42,438	0/0:16,0:16:39.10:0,39,413	0/0:20,0:22:53.91:0,54,532	0/1:10,9:20:99:189,0,213	1/1:1,10:11:22.56:236,23,0	0/1:2,4:7:1.14:87,0,1	0/0:25,0:25:38.36:0,38,596	0/0:28,0:28:78.17:0,78,816	0/0:11,0:11:30.05:0,30,303	0/0:16,0:18:53.93:0,54,544	0/0:26,0:26:47.13:0,47,681	0/0:13,0:13:30.55:0,31,320	0/0:22,0:24:66:0,66,686	0/0:25,0:25:65.98:0,66,665	0/0:38,1:40:99:0,108,1107	0/0:13,0:13:30.08:0,30,320
chr10	27900666	.	T	TAGACATTC	54014.58	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=4.634;DP=590;FS=9.008;HRun=0;HaplotypeScore=231.3906;InbreedingCoeff=0.8873;MQ=53.87;MQ0=0;MQRankSum=-8.836;QD=97.68;ReadPosRankSum=5.106;VQSLOD=4.2779;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,4:9:24.08:807,24,0	1/1:3,9:11:30.10:1217,30,0	0/0:19,0:19:45.15:0,45,1044	0/0:18,0:18:45.08:0,45,972	1/1:10,26:42:99:3764,102,0	1/1:9,22:31:90.29:3129,90,0	1/1:4,6:10:30.10:954,30,0	1/1:14,14:28:84.28:3075,84,0	1/1:10,14:25:69.23:2551,69,0	1/1:14,10:27:72.24:2383,72,0	1/1:7,14:21:63.21:2202,63,0	1/1:8,8:16:45.14:1616,45,0	1/1:8,19:28:81.28:3102,81,0	1/1:10,24:35:99:3825,99,0	1/1:5,12:19:48.16:1763,48,0	1/1:6,13:20:60.20:2172,60,0	1/1:3,3:6:15.03:443,15,0	1/1:4,2:6:11.23:421,11,0	1/1:13,3:16:42.14:1306,42,0	1/1:5,16:21:60.20:2220,60,0	1/1:4,0:4:3.01:130,3,0	1/1:3,12:15:39.13:1597,39,0	1/1:13,16:32:72.08:2758,72,0	1/1:5,7:15:21.07:564,21,0	1/1:10,15:27:75.26:2741,75,0	1/1:13,21:35:99:3803,105,0	1/1:15,28:46:99:4829,120,0	1/1:2,4:6:18.06:644,18,0
chr10	27900669	.	A	AC	5911.04	PASS	AB=0.931;AC=31;AF=0.554;AN=56;BaseQRankSum=15.894;DP=564;FS=24.881;HRun=0;HaplotypeScore=292.5618;InbreedingCoeff=-0.4477;MQ=54.05;MQ0=0;MQRankSum=-10.549;QD=11.22;ReadPosRankSum=10.389;VQSLOD=3.6454;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:9,0:8:5.74:99,0,6	0/1:11,0:10:14.92:101,0,15	0/0:19,0:19:57.16:0,57,732	0/0:18,0:18:49.95:0,50,633	0/1:39,3:42:73.43:571,0,73	0/1:28,3:31:99:409,0,108	1/1:8,2:10:22.01:166,22,0	0/1:26,2:28:99:175,0,367	0/1:20,4:24:7.76:291,0,8	0/1:15,8:23:53.94:436,0,54	0/1:19,0:19:70.87:71,0,95	0/1:14,1:15:99:110,0,106	1/1:24,3:27:18.08:369,18,0	0/1:30,3:33:2.05:297,0,2	1/1:18,2:20:29.97:391,30,0	1/1:16,4:20:21.67:304,22,0	0/1:7,1:8:30.81:31,0,63	0/1:4,0:4:13.20:13,0,34	0/1:10,4:14:99:187,0,213	1/1:19,2:21:10.92:307,11,0	0/1:4,0:4:4.37:4,0,36	0/1:14,0:14:15.14:107,0,15	0/1:27,2:29:26.06:266,0,26	0/1:13,1:14:17.72:132,0,18	0/1:24,2:26:43.89:359,0,44	0/1:31,4:35:99:374,0,112	0/1:38,2:40:99:316,0,120	0/1:6,0:6:26.50:26,0,66
chr10	27901024	.	G	GGT	2042.40	PASS	AB=0.959;AC=42;AF=0.840;AN=50;BaseQRankSum=-1.938;DP=532;FS=2.027;HRun=0;HaplotypeScore=109.6648;InbreedingCoeff=0.1661;MQ=51.93;MQ0=16;MQRankSum=0.944;QD=4.97;ReadPosRankSum=0.050;VQSLOD=2.7235;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:26,2:27:15.02:160,0,15	./.	./.	./.	1/1:22,0:20:5.89:80,6,0	1/1:14,4:18:6.02:88,6,0	0/1:23,0:23:7.77:91,0,8	1/1:18,0:18:1.55:4,2,0	1/1:8,8:15:2.90:44,3,0	1/1:17,3:20:9.75:173,10,0	1/1:9,3:15:3.01:44,3,0	1/1:11,5:16:9.03:133,9,0	1/1:9,0:9:3.01:42,3,0	1/1:19,0:19:6.01:68,6,0	1/1:15,7:22:6.02:89,6,0	1/1:21,1:22:11.88:126,12,0	0/0:17,0:17:2.60:0,3,10	1/1:7,0:7:1.25:3,1,0	0/1:16,0:15:0:0,0,0	0/0:9,4:14:2.98:0,3,22	1/1:24,1:24:9.02:113,9,0	1/1:5,2:7:3.01:44,3,0	1/1:13,0:18:5.97:47,6,0	0/1:25,1:28:1.33:265,0,1	1/1:15,2:15:15.04:199,15,0	1/1:14,1:18:6.01:70,6,0	1/1:9,7:16:12.51:178,13,0	1/1:2,4:7:6.02:89,6,0
chr10	27901122	.	CTGAATT	C	21720.86	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=4.794;DP=454;FS=9.615;HRun=0;HaplotypeScore=147.2827;InbreedingCoeff=0.9547;MQ=58.72;MQ0=1;MQRankSum=-9.013;QD=57.01;ReadPosRankSum=4.644;VQSLOD=4.9001;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,9:13:24.08:576,24,0	1/1:0,5:5:15.05:358,15,0	0/0:29,0:28:72.24:0,72,2435	0/0:20,0:19:51.17:0,51,1705	1/1:2,23:25:57.20:1358,57,0	1/1:1,15:16:42.14:1009,42,0	1/1:3,12:15:36.12:846,36,0	1/1:9,9:17:27.08:602,27,0	1/1:0,23:22:60.21:1439,60,0	1/1:1,14:15:45.14:1031,45,0	1/1:1,20:21:57.20:1368,57,0	1/1:1,11:12:33.11:791,33,0	1/1:0,16:16:48.16:1151,48,0	1/1:0,19:18:48.16:1134,48,0	1/1:1,18:19:42.14:1003,42,0	1/1:1,22:23:60.21:1440,60,0	0/0:17,0:17:44.83:0,45,1516	0/0:7,0:7:18.06:0,18,648	1/1:2,8:8:24.08:577,24,0	1/1:0,17:17:42.14:1009,42,0	1/1:1,8:8:12.04:288,12,0	1/1:0,21:20:54.09:1297,54,0	1/1:3,15:18:36.12:860,36,0	1/1:2,12:14:24.08:566,24,0	1/1:2,17:18:36.12:859,36,0	1/1:0,15:15:45.14:1034,45,0	1/1:3,13:16:42.14:982,42,0	1/1:0,2:2:6.02:144,6,0
chr10	27901267	.	G	GT	11116.11	PASS	AB=0.775;AC=48;AF=0.857;AN=56;BaseQRankSum=-7.637;DP=608;FS=3.158;HRun=9;HaplotypeScore=80.3009;InbreedingCoeff=0.7154;MQ=67.27;MQ0=12;MQRankSum=-0.110;QD=21.63;ReadPosRankSum=1.784;VQSLOD=5.7635;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,13:18:47.86:464,48,0	1/1:2,5:7:15.04:166,15,0	0/0:55,0:23:20.15:0,20,179	0/1:61,0:25:30.38:30,0,130	1/1:5,19:24:57.11:617,57,0	1/1:5,18:24:35.28:481,35,0	1/1:0,14:15:41.95:446,42,0	1/1:6,25:31:16.64:677,17,0	1/1:3,18:21:44.95:478,45,0	1/1:1,25:26:72.18:787,72,0	1/1:11,15:26:18.85:549,19,0	1/1:3,6:9:23.97:232,24,0	1/1:7,15:22:33.99:568,34,0	1/1:5,11:15:39.10:424,39,0	1/1:0,13:13:36.10:398,36,0	0/1:4,18:22:0.90:446,0,1	0/0:22,0:22:47.85:0,48,401	0/0:15,0:16:33.23:0,33,263	1/1:4,14:18:39.09:423,39,0	1/1:4,23:28:43.03:674,43,0	1/1:2,15:17:39.11:431,39,0	1/1:6,12:18:42.10:456,42,0	1/1:3,15:19:39.11:431,39,0	1/1:0,9:9:24.06:265,24,0	1/1:2,14:16:19.24:439,19,0	1/1:7,7:14:4.02:265,4,0	1/1:5,25:31:45.97:718,46,0	1/1:3,6:9:24:250,24,0
chr10	27901362	.	C	CT	12660.71	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-4.572;DP=472;FS=5.699;HRun=5;HaplotypeScore=70.6988;InbreedingCoeff=0.9559;MQ=82.21;MQ0=0;MQRankSum=-4.098;QD=32.63;ReadPosRankSum=1.424;VQSLOD=5.5336;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,10:13:27.03:334,27,0	1/1:0,3:3:9.03:118,9,0	0/0:32,0:27:53.95:0,54,571	0/0:26,0:24:37.73:0,38,461	1/1:5,14:19:45.14:577,45,0	1/1:1,14:15:39.13:508,39,0	1/1:2,20:22:54.18:708,54,0	1/1:5,31:36:93.27:1180,93,0	1/1:1,15:16:48.14:609,48,0	1/1:4,12:16:42.12:534,42,0	1/1:8,5:13:23.97:274,24,0	1/1:2,5:7:18.04:220,18,0	1/1:5,16:22:60.08:728,60,0	1/1:4,24:28:81.06:968,81,0	1/1:1,15:16:45.08:565,45,0	1/1:4,16:20:57.10:700,57,0	0/0:12,0:12:33.06:0,33,344	0/0:14,0:14:39.10:0,39,419	1/1:6,12:18:42.08:509,42,0	1/1:3,17:20:45.10:572,45,0	1/1:2,15:17:39.13:513,39,0	1/1:2,4:6:12.04:158,12,0	1/1:2,11:13:33.10:420,33,0	1/1:1,7:8:21.07:276,21,0	1/1:2,15:17:48.11:609,48,0	1/1:0,14:14:42.14:552,42,0	1/1:1,23:24:69.22:907,69,0	1/1:2,3:5:9.03:118,9,0
chr10	27901405	.	A	AT	10605.16	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-2.164;DP=395;FS=3.398;HRun=6;HaplotypeScore=56.0659;InbreedingCoeff=0.9059;MQ=53.92;MQ0=1;MQRankSum=-0.799;QD=32.14;ReadPosRankSum=0.964;VQSLOD=5.2740;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,11:14:3.05:348,3,0	1/1:0,4:4:12.04:151,12,0	0/0:17,0:11:30.07:0,30,305	0/0:13,0:9:26.97:0,27,256	1/1:2,8:10:21.07:264,21,0	1/1:0,17:17:51.16:641,51,0	1/1:4,6:10:27.04:311,27,0	1/1:6,19:25:63.19:780,63,0	1/1:2,16:18:45.14:557,45,0	1/1:1,10:11:33.11:415,33,0	1/1:1,12:13:33.11:415,33,0	1/1:0,10:10:30.10:377,30,0	1/1:1,21:22:63.19:779,63,0	1/1:4,18:22:54.17:678,54,0	1/1:2,16:18:51.16:637,51,0	1/1:4,16:20:57.16:693,57,0	0/0:15,0:15:45.10:0,45,458	0/0:20,0:20:24.23:0,24,474	1/1:1,12:13:33.11:415,33,0	1/1:3,13:16:42.12:515,42,0	1/1:5,7:12:24.08:302,24,0	1/1:1,4:4:12.04:151,12,0	1/1:0,8:8:24.07:296,24,0	1/1:3,3:6:6.52:109,7,0	1/1:2,11:13:30.10:377,30,0	1/1:3,10:13:36.12:452,36,0	1/1:3,22:25:60.19:754,60,0	1/1:0,5:5:15.05:189,15,0
chr10	27901668	.	AT	A	9100.02	PASS	AB=1.000;AC=49;AF=0.875;AN=56;BaseQRankSum=2.723;DP=387;FS=0.627;HRun=7;HaplotypeScore=39.9626;InbreedingCoeff=0.7621;MQ=66.76;MQ0=1;MQRankSum=1.824;QD=26.22;ReadPosRankSum=1.829;VQSLOD=5.0595;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,19:19:54.12:551,54,0	1/1:1,6:7:15.03:153,15,0	0/0:6,0:6:11.91:0,12,115	0/1:8,0:8:9.53:10,0,138	1/1:1,22:23:60.13:612,60,0	1/1:3,10:12:30.06:306,30,0	1/1:2,8:10:24.05:245,24,0	1/1:1,21:22:63.11:628,63,0	1/1:0,3:3:6.01:61,6,0	1/1:0,17:17:51.10:514,51,0	1/1:1,18:18:42.09:428,42,0	1/1:1,11:12:33.07:337,33,0	1/1:1,14:15:39.09:398,39,0	1/1:2,12:14:36.08:367,36,0	1/1:0,14:14:36.08:367,36,0	1/1:3,14:17:39.09:398,39,0	0/0:13,0:13:33.11:0,33,413	0/0:21,0:21:57.14:0,57,699	1/1:1,17:18:51.09:512,51,0	1/1:0,17:17:42.09:429,42,0	1/1:0,3:3:9.02:92,9,0	1/1:1,4:5:6.01:61,6,0	1/1:1,11:12:27.06:275,27,0	1/1:0,4:4:12.03:122,12,0	1/1:0,19:19:54.12:551,54,0	1/1:0,24:24:72.16:734,72,0	1/1:0,21:21:63.14:643,63,0	1/1:0,11:11:30.07:306,30,0
chr10	27902132	.	A	ATT	19038.78	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-1.465;DP=545;FS=14.310;HRun=7;HaplotypeScore=140.8190;InbreedingCoeff=0.9385;MQ=54.19;MQ0=1;MQRankSum=-3.126;QD=38.62;ReadPosRankSum=-1.007;VQSLOD=3.1819;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,20:24:66.09:962,66,0	1/1:2,7:9:27.06:413,27,0	0/0:13,0:9:19.46:0,19,214	0/0:8,0:7:5.59:0,6,100	1/1:10,21:31:74.88:1060,75,0	1/1:4,10:14:36.12:582,36,0	1/1:6,13:19:45.11:707,45,0	1/1:15,24:39:90.26:1414,90,0	1/1:1,13:14:42.14:688,42,0	1/1:7,21:28:74.83:1163,75,0	1/1:5,15:20:54.14:855,54,0	1/1:9,10:19:44.33:655,44,0	1/1:10,12:22:57.05:838,57,0	1/1:6,5:11:26.97:335,27,0	1/1:7,15:22:54.14:810,54,0	1/1:8,10:18:48.10:728,48,0	0/0:17,0:17:36.10:0,36,419	0/0:14,0:14:33.09:0,33,381	1/1:14,9:23:51.16:803,51,0	1/1:12,17:29:72.08:1049,72,0	1/1:2,5:7:15.05:233,15,0	1/1:2,4:6:18.02:265,18,0	1/1:10,9:19:53.12:763,53,0	1/1:4,5:8:15.05:242,15,0	1/1:2,27:29:84.24:1345,84,0	1/1:15,22:36:99:1462,99,0	1/1:16,24:40:99:1518,102,0	1/1:1,3:4:9.03:148,9,0
chr10	27902147	.	GT	G	9385.17	PASS	AB=0.950;AC=53;AF=0.946;AN=56;BaseQRankSum=0.935;DP=528;FS=9.547;HRun=10;HaplotypeScore=176.3462;InbreedingCoeff=0.3566;MQ=56.26;MQ0=2;MQRankSum=-2.074;QD=18.29;ReadPosRankSum=2.556;VQSLOD=3.5932;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,15:25:14.80:355,15,0	1/1:2,7:9:17.98:156,18,0	0/1:18,0:12:12.35:12,0,51	0/0:13,1:11:2.53:0,3,125	1/1:4,26:30:80.86:689,81,0	1/1:2,10:12:29.98:260,30,0	1/1:7,12:19:32.98:285,33,0	1/1:12,27:39:47.77:642,48,0	1/1:3,11:14:32.99:285,33,0	1/1:6,26:33:77.82:659,78,0	1/1:7,14:21:44.90:382,45,0	1/1:6,12:18:35.98:310,36,0	1/1:5,19:24:43.52:465,44,0	1/1:2,8:10:23.98:206,24,0	1/1:1,17:18:20.81:407,21,0	1/1:3,16:19:47.95:414,48,0	1/1:2,13:15:32.99:286,33,0	1/1:2,10:12:32.99:286,33,0	1/1:2,14:16:26.70:369,27,0	1/1:11,16:27:50.82:439,51,0	1/1:0,4:4:12:104,12,0	1/1:2,5:7:17.99:155,18,0	1/1:6,13:19:4.36:312,4,0	1/1:3,4:6:5.96:52,6,0	1/1:3,28:31:83.97:726,84,0	1/1:13,18:30:26.76:457,27,0	1/1:8,23:31:71.92:620,72,0	1/1:1,2:3:6:52,6,0
chr10	27902192	.	C	CTTTTTTTCT	29443.19	PASS	AB=1.000;AC=51;AF=0.944;AN=54;BaseQRankSum=-2.039;DP=618;FS=2.813;HRun=0;HaplotypeScore=200.9698;InbreedingCoeff=0.5730;MQ=57.17;MQ0=7;MQRankSum=-3.351;QD=51.12;ReadPosRankSum=2.948;VQSLOD=4.6750;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,7:23:23.87:828,24,0	1/1:2,3:5:6.91:277,7,0	0/1:43,0:22:7.42:7,0,184	0/0:39,0:21:12.51:0,13,228	1/1:11,26:39:63.17:2352,63,0	1/1:3,3:8:15.05:389,15,0	1/1:6,6:13:12.04:460,12,0	1/1:21,0:28:51.17:955,51,0	1/1:8,7:15:24.08:812,24,0	1/1:14,13:31:81.06:2051,81,0	1/1:6,17:32:66.15:2214,66,0	1/1:5,12:18:29.98:1075,30,0	1/1:7,17:29:47.68:1634,48,0	1/1:4,13:18:30.10:1073,30,0	1/1:8,9:18:36.12:1075,36,0	1/1:4,16:24:45.15:1776,45,0	1/1:10,1:12:27.05:526,27,0	1/1:8,4:14:21.07:578,21,0	1/1:13,11:28:54.18:1309,54,0	1/1:11,16:36:81.18:2002,81,0	./.	1/1:4,2:9:18.06:419,18,0	1/1:7,13:21:39.13:1498,39,0	1/1:4,3:7:11.86:356,12,0	1/1:19,15:35:75.12:2207,75,0	1/1:14,16:33:73.94:1835,74,0	1/1:15,14:33:57.03:1644,57,0	1/1:2,0:2:6.02:90,6,0
chr10	27902200	.	C	CTT	7504.18	PASS	AB=0.879;AC=29;AF=0.537;AN=54;BaseQRankSum=13.566;DP=621;FS=13.895;HRun=7;HaplotypeScore=196.6329;InbreedingCoeff=-0.5552;MQ=57.47;MQ0=5;MQRankSum=-13.294;QD=13.77;ReadPosRankSum=11.339;VQSLOD=-0.5960;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:24,2:26:76.28:188,0,76	0/1:6,0:6:25.64:45,0,26	0/0:36,0:20:23.43:0,23,237	0/0:36,0:19:18.11:0,18,226	0/1:37,2:39:28.44:472,0,28	1/1:8,1:9:15.03:167,15,0	1/1:9,0:9:12.01:127,12,0	0/1:24,2:26:99:301,0,150	0/1:11,3:14:9.24:231,0,9	0/1:23,9:32:99:638,0,168	0/1:29,2:31:66.14:405,0,66	0/1:15,3:18:2.87:267,0,3	0/1:27,5:32:31.08:401,0,31	1/1:14,3:17:30.03:296,30,0	0/1:16,4:20:63.17:367,0,63	0/1:25,3:28:99:387,0,122	0/1:15,1:15:80.93:81,0,154	0/1:11,2:13:71.94:160,0,72	0/1:22,3:25:99:287,0,152	0/1:27,7:34:99:509,0,113	./.	0/1:10,3:13:99:130,0,181	0/1:19,3:22:58.58:341,0,59	0/1:7,2:8:42.29:106,0,42	0/1:29,7:36:91.06:717,0,91	0/1:28,4:32:99:317,0,241	0/1:31,5:36:99:474,0,143	1/1:0,2:2:6.02:90,6,0
chr10	27902851	.	TG	T	6287.19	PASS	AB=0.716;AC=36;AF=0.643;AN=56;BaseQRankSum=9.438;DP=640;FS=1.513;HRun=2;HaplotypeScore=159.7830;InbreedingCoeff=0.0337;MQ=57.53;MQ0=7;MQRankSum=3.800;QD=12.04;ReadPosRankSum=8.411;VQSLOD=3.1693;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:15,13:28:71.31:289,0,71	1/1:5,5:10:26.83:191,27,0	0/0:36,0:17:43.70:0,44,534	0/0:28,1:13:33.03:0,33,419	0/1:18,12:30:56.37:231,0,56	0/1:13,8:21:42.23:180,0,42	0/1:7,6:13:11.10:125,0,11	0/1:32,3:35:41.21:158,0,41	1/1:9,9:18:36.63:244,37,0	0/1:18,13:31:19.81:435,0,20	0/1:15,5:20:27.02:196,0,27	0/1:10,7:17:1.27:218,0,1	1/1:14,13:27:15.63:375,16,0	1/1:9,12:22:4.09:310,4,0	1/1:9,12:21:38.63:404,39,0	1/1:18,9:27:0.91:283,1,0	0/0:30,1:31:46.24:0,46,843	0/0:22,0:21:48.71:0,49,666	1/1:8,11:19:45.16:330,45,0	0/1:14,13:27:51.50:303,0,51	1/1:11,9:19:29.02:215,29,0	1/1:13,9:22:4.71:244,5,0	0/1:9,8:17:81.08:113,0,81	1/1:11,13:24:45.18:447,45,0	1/1:17,10:26:11.60:387,12,0	1/1:13,11:24:17.46:377,17,0	0/1:9,7:16:29.73:137,0,30	0/1:2,4:6:23.36:95,0,23
chr10	27902854	.	TTGG	T	11230.66	PASS	AB=0.698;AC=42;AF=0.750;AN=56;BaseQRankSum=5.475;DP=636;FS=6.791;HRun=0;HaplotypeScore=164.6985;InbreedingCoeff=0.3210;MQ=56.50;MQ0=7;MQRankSum=2.054;QD=21.47;ReadPosRankSum=8.530;VQSLOD=3.6577;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:15,13:29:66.11:545,0,66	1/1:5,5:10:29.76:331,30,0	0/0:34,0:15:32.89:0,33,612	0/0:28,0:11:30.09:0,30,528	1/1:21,11:32:4.53:561,5,0	0/1:13,8:21:46.66:365,0,47	1/1:7,6:13:8.09:276,8,0	1/1:33,3:36:3.47:462,3,0	1/1:10,9:19:35.23:446,35,0	1/1:18,13:31:4.05:686,4,0	0/1:15,5:20:18.66:386,0,19	0/1:10,7:17:17.87:342,0,18	1/1:11,13:24:27.49:659,27,0	1/1:10,12:22:21.75:542,22,0	1/1:8,12:20:42.04:603,42,0	1/1:16,9:25:17.62:508,18,0	0/0:29,0:29:74.54:0,75,1302	0/0:22,0:21:45.35:0,45,1123	1/1:8,11:19:42.32:469,42,0	1/1:15,13:28:12.99:564,13,0	1/1:11,8:18:31.24:392,31,0	1/1:13,9:22:1.79:468,2,0	0/1:9,8:17:51.63:228,0,52	1/1:11,13:24:30.25:663,30,0	1/1:17,10:26:31.98:641,32,0	1/1:11,11:22:24.74:624,25,0	1/1:13,7:20:4.79:310,5,0	0/1:2,4:6:15.27:159,0,15
chr10	27902865	.	G	GT	4349.07	PASS	AB=0.818;AC=27;AF=0.482;AN=56;BaseQRankSum=-8.764;DP=638;FS=2.418;HRun=2;HaplotypeScore=160.6417;InbreedingCoeff=-0.5961;MQ=56.35;MQ0=8;MQRankSum=1.053;QD=7.97;ReadPosRankSum=-6.492;VQSLOD=-0.2958;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:25,2:27:89.47:89,0,226	0/1:7,3:10:37.52:98,0,38	0/0:38,0:14:32.85:0,33,374	0/0:39,0:18:24.89:0,25,303	0/1:25,5:30:99:182,0,292	0/1:15,6:21:99:126,0,135	0/1:11,3:14:91.46:91,0,136	0/1:24,12:36:99:435,0,360	0/1:15,5:20:83.70:84,0,194	0/1:22,7:29:99:176,0,146	0/1:10,9:19:99:264,0,105	0/1:13,3:17:24.28:24,0,213	0/1:19,7:26:99:179,0,180	0/1:19,3:22:50.92:51,0,177	0/1:15,5:20:27.31:27,0,149	0/1:15,8:23:99:194,0,163	1/1:6,22:28:34.09:798,34,0	1/1:4,21:25:35.74:800,36,0	0/1:16,1:16:3.70:4,0,167	0/1:21,4:25:41.81:42,0,245	0/1:15,4:19:73.53:74,0,173	0/1:17,6:23:99:149,0,230	0/0:14,0:14:19.95:0,20,173	0/1:18,5:23:64.77:65,0,161	0/1:17,9:25:99:114,0,187	0/1:13,8:21:59.39:230,0,59	0/1:18,0:18:52.56:53,0,280	0/1:5,1:6:0.87:1,0,49
chr10	27903534	.	T	TTCTCAGGGAG	1155.48	PASS	AB=0.833;AC=29;AF=0.967;AN=30;BaseQRankSum=-1.576;DP=30;FS=3.222;HRun=0;HaplotypeScore=11.5383;InbreedingCoeff=-0.1856;MQ=122.55;MQ0=0;MQRankSum=-1.734;QD=44.44;ReadPosRankSum=-0.315;VQSLOD=2.1894;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	1/1:1,0:1:3:25,3,0	1/1:1,1:4:9.92:468,10,0	0/1:4,0:5:19.15:122,0,19	./.	1/1:1,0:1:2.97:20,3,0	1/1:2,0:2:6.02:144,6,0	1/1:1,0:1:3:26,3,0	./.	./.	1/1:1,0:1:2.97:20,3,0	1/1:1,0:1:2.97:20,3,0	1/1:1,0:1:2.98:21,3,0	1/1:1,0:1:3.01:90,3,0	1/1:1,0:1:2.98:21,3,0	./.	1/1:2,0:2:2.97:20,3,0	./.	./.	./.	./.	1/1:1,0:1:2.98:21,3,0	1/1:1,0:1:3.01:105,3,0	./.	./.	./.	1/1:3,0:3:8.97:113,9,0	./.
chr10	27905064	.	GT	G	2074.59	PASS	AB=0.917;AC=47;AF=0.839;AN=56;BaseQRankSum=9.625;DP=383;FS=0.617;HRun=2;HaplotypeScore=67.3739;InbreedingCoeff=0.7167;MQ=73.76;MQ0=0;MQRankSum=-5.088;QD=6.54;ReadPosRankSum=2.988;VQSLOD=0.9311;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:17:31.43:110,31,0	1/1:7,0:7:16.64:62,17,0	0/0:15,1:15:19.94:0,20,549	0/0:16,0:17:48.20:0,48,673	1/1:12,0:12:2.73:62,3,0	1/1:16,0:16:10.03:130,10,0	1/1:7,1:8:19.50:88,20,0	1/1:27,0:27:9.09:84,9,0	1/1:13,0:13:2.98:70,3,0	1/1:13,0:13:21.38:80,21,0	1/1:18,0:18:39.32:138,39,0	1/1:6,0:6:14.55:56,15,0	1/1:14,1:15:28.27:130,28,0	1/1:17,0:17:17.47:91,17,0	1/1:10,1:11:24.13:119,24,0	1/1:17,0:17:22.11:157,22,0	0/0:20,0:20:51.31:0,51,883	0/0:12,0:12:33.11:0,33,514	0/1:10,1:11:20.03:55,0,20	1/1:21,0:21:50.22:185,50,0	1/1:17,1:18:22.43:147,22,0	1/1:7,0:7:16:55,16,0	1/1:7,0:7:16.41:63,16,0	1/1:8,0:8:11.25:37,11,0	1/1:9,0:9:18.88:59,19,0	1/1:17,0:17:29.23:84,29,0	1/1:12,0:12:4.43:100,4,0	1/1:10,0:10:22.01:82,22,0
chr10	27905065	.	TC	T	9203.58	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=5.368;DP=383;FS=0.617;HRun=6;HaplotypeScore=43.0556;InbreedingCoeff=0.9499;MQ=74.94;MQ0=0;MQRankSum=-5.575;QD=29.03;ReadPosRankSum=1.356;VQSLOD=5.1305;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,15:17:42.07:439,42,0	1/1:0,7:7:21.05:226,21,0	0/0:16,1:16:4.71:0,5,437	0/0:17,0:17:43.78:0,44,522	1/1:1,11:12:33.05:343,33,0	1/1:1,14:15:36.09:386,36,0	1/1:2,7:9:24.06:258,24,0	1/1:0,26:26:75.14:775,75,0	1/1:1,12:13:33.05:343,33,0	1/1:0,13:13:39.09:413,39,0	1/1:0,18:18:54.05:555,54,0	1/1:0,6:6:18.05:193,18,0	1/1:1,14:15:39.03:393,39,0	1/1:1,16:17:45.11:484,45,0	1/1:1,10:11:30.08:322,30,0	1/1:2,16:18:48.09:504,48,0	0/0:19,1:20:27.95:0,28,717	0/0:12,0:12:36.09:0,36,443	1/1:3,8:11:27.06:284,27,0	1/1:0,21:21:63.16:677,63,0	1/1:2,16:18:51.13:547,51,0	1/1:0,7:7:21.05:226,21,0	1/1:0,7:7:21.05:226,21,0	1/1:0,8:8:15.04:161,15,0	1/1:0,9:9:27.07:290,27,0	1/1:0,17:17:51.13:548,51,0	1/1:1,11:12:30.08:322,30,0	1/1:0,10:10:27.07:290,27,0
chr10	27905519	.	G	GA	12306.55	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-4.223;DP=564;FS=18.837;HRun=9;HaplotypeScore=97.3732;InbreedingCoeff=0.9883;MQ=72.39;MQ0=0;MQRankSum=-2.456;QD=25.37;ReadPosRankSum=3.012;VQSLOD=3.7375;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,24:30:66.13:716,66,0	1/1:2,5:7:15.04:166,15,0	0/0:17,0:18:16.67:0,17,168	0/0:19,0:17:31.24:0,31,251	1/1:2,23:25:63.09:670,63,0	1/1:4,22:26:60.16:664,60,0	1/1:1,12:13:36.10:398,36,0	1/1:8,22:30:69.16:742,69,0	1/1:0,12:12:33.09:365,33,0	1/1:7,13:20:39.09:421,39,0	1/1:4,7:11:27.06:280,27,0	1/1:5,14:19:39.06:414,39,0	1/1:5,11:16:33.97:361,34,0	1/1:7,24:31:81.21:884,81,0	1/1:3,20:23:57.15:626,57,0	1/1:1,19:20:48.13:531,48,0	0/0:25,0:25:62.93:0,63,539	0/0:17,0:17:39.40:0,39,327	1/1:2,12:14:36.06:374,36,0	1/1:9,15:25:50.86:498,51,0	1/1:3,8:11:24.06:265,24,0	1/1:0,13:14:42.11:459,42,0	1/1:5,17:22:23.09:459,23,0	1/1:5,14:19:42.11:457,42,0	1/1:1,19:21:54.15:597,54,0	1/1:2,27:29:84.19:903,84,0	1/1:3,31:34:78.21:858,78,0	1/1:1,12:13:18.05:199,18,0
chr10	27905528	.	A	AAT	9583.42	PASS	AB=1.000;AC=47;AF=0.839;AN=56;BaseQRankSum=9.118;DP=551;FS=0.778;HRun=0;HaplotypeScore=115.8446;InbreedingCoeff=0.8577;MQ=70.16;MQ0=0;MQRankSum=-0.844;QD=19.80;ReadPosRankSum=10.119;VQSLOD=4.2701;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:30:44.34:484,44,0	1/1:6,0:6:10.24:106,10,0	0/0:10,0:10:16.06:0,16,289	0/0:17,0:14:37.44:0,37,428	0/1:32,0:32:0.58:399,0,1	1/1:24,0:24:47.39:486,47,0	1/1:12,0:12:35.94:299,36,0	1/1:29,1:30:45.62:649,46,0	1/1:13,0:13:28.39:271,28,0	1/1:19,0:19:18.91:327,19,0	1/1:10,2:12:16.17:269,16,0	1/1:15,1:16:31.66:326,32,0	1/1:15,1:16:3.29:232,3,0	1/1:29,2:31:59.11:701,59,0	1/1:24,1:26:36.23:488,36,0	1/1:21,0:21:35.04:400,35,0	0/0:23,0:23:66.20:0,66,913	0/0:17,0:17:48:0,48,590	1/1:14,0:14:25.90:317,26,0	1/1:20,2:22:22.03:454,22,0	1/1:9,0:9:19.41:196,19,0	1/1:17,0:17:24.30:357,24,0	1/1:18,2:20:14.36:408,14,0	1/1:15,1:16:35.79:383,36,0	1/1:23,0:23:45.31:445,45,0	1/1:30,1:31:72.49:807,72,0	1/1:33,1:34:60.34:633,60,0	1/1:10,0:10:17.95:146,18,0
chr10	27905848	.	TA	T	10225.30	PASS	AB=0.944;AC=53;AF=0.946;AN=56;BaseQRankSum=-1.199;DP=521;FS=6.172;HRun=10;HaplotypeScore=74.1918;InbreedingCoeff=0.6640;MQ=65.80;MQ0=2;MQRankSum=-2.369;QD=20.13;ReadPosRankSum=3.684;VQSLOD=5.8522;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,27:29:65.97:572,66,0	1/1:2,8:10:23.99:208,24,0	0/0:13,0:10:20.34:0,20,168	0/1:16,1:14:11.10:11,0,103	1/1:3,25:28:41.79:591,42,0	1/1:3,7:10:17.99:156,18,0	1/1:3,14:16:35.99:312,36,0	1/1:3,24:27:71.92:613,72,0	1/1:2,15:17:41.99:364,42,0	1/1:1,21:22:62.99:547,63,0	1/1:1,24:25:71.98:624,72,0	1/1:1,11:12:26.99:234,27,0	1/1:5,22:27:65.98:573,66,0	1/1:2,17:19:44.99:391,45,0	1/1:2,20:22:56.99:495,57,0	1/1:3,21:24:59.99:521,60,0	1/1:2,13:15:32.99:286,33,0	1/1:3,10:13:32.99:286,33,0	1/1:1,14:15:41.97:361,42,0	1/1:1,20:21:56.98:495,57,0	1/1:0,7:7:21:182,21,0	1/1:1,14:15:35.98:312,36,0	1/1:2,16:19:41.03:345,41,0	1/1:1,6:7:17.99:156,18,0	1/1:3,16:19:44.98:391,45,0	1/1:2,23:25:68.98:599,69,0	1/1:12,21:33:44.97:391,45,0	1/1:1,12:13:23.99:208,24,0
chr10	27906052	.	AT	A	12496.40	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=2.101;DP=504;FS=0.000;HRun=6;HaplotypeScore=57.8946;InbreedingCoeff=0.9207;MQ=73.33;MQ0=2;MQRankSum=1.958;QD=27.77;ReadPosRankSum=1.714;VQSLOD=5.3751;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,11:12:30.07:322,30,0	1/1:0,3:3:9.02:97,9,0	0/0:6,0:6:18.02:0,18,202	0/0:12,0:12:3.60:0,4,190	1/1:3,16:19:42.10:451,42,0	1/1:1,19:20:57.14:612,57,0	1/1:0,4:4:12.03:129,12,0	1/1:6,37:43:99:1174,111,0	1/1:2,14:16:36.09:387,36,0	1/1:1,24:25:72.13:747,72,0	1/1:5,21:25:57.14:613,57,0	1/1:1,16:17:48.12:516,48,0	1/1:2,26:28:74.88:806,75,0	1/1:2,14:15:42.11:451,42,0	1/1:0,23:23:66.17:709,66,0	1/1:1,21:21:54.14:580,54,0	0/0:16,0:16:42.09:0,42,527	0/0:20,0:20:57.18:0,57,743	1/1:3,19:22:57.14:612,57,0	1/1:0,24:24:69.17:742,69,0	1/1:1,9:10:21.05:226,21,0	1/1:2,12:14:33.08:355,33,0	1/1:1,17:18:51.13:548,51,0	1/1:1,8:9:21.05:226,21,0	1/1:1,12:12:33.08:355,33,0	1/1:1,21:22:63.16:677,63,0	1/1:1,35:36:93.23:1000,93,0	1/1:1,7:8:15.04:161,15,0
chr10	27906911	.	G	GA	22856.19	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-3.393;DP=641;FS=13.123;HRun=2;HaplotypeScore=53.5838;InbreedingCoeff=0.9416;MQ=55.76;MQ0=7;MQRankSum=-1.062;QD=36.34;ReadPosRankSum=1.917;VQSLOD=4.2298;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,22:21:57.19:813,57,0	1/1:0,9:9:27.09:389,27,0	0/0:7,0:3:9.03:0,9,112	0/0:5,0:4:12.04:0,12,145	1/1:1,28:29:72.24:1037,72,0	1/1:1,45:46:99:1445,102,0	1/1:0,15:15:42.06:558,42,0	1/1:2,30:32:87.29:1252,87,0	1/1:2,24:26:60.17:842,60,0	1/1:1,30:31:93.31:1323,93,0	1/1:1,28:29:72.20:1013,72,0	1/1:1,25:26:63.13:862,63,0	1/1:0,38:38:96.21:1314,96,0	1/1:0,28:29:69.23:988,69,0	1/1:1,27:28:66.22:951,66,0	1/1:0,18:18:48.16:691,48,0	1/1:1,9:10:21.07:289,21,0	1/1:1,14:15:42.14:604,42,0	1/1:3,13:15:42.14:605,42,0	1/1:1,44:45:99:1790,126,0	1/1:0,21:21:48.16:685,48,0	1/1:1,20:21:51.13:711,51,0	1/1:0,20:20:57.19:821,57,0	1/1:0,19:19:57.19:821,57,0	1/1:0,27:27:69.17:994,69,0	1/1:1,22:23:66.22:934,66,0	1/1:1,25:26:63.21:907,63,0	1/1:0,8:7:15.05:216,15,0
chr10	27907105	.	C	CT	771.74	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-3.253;DP=546;FS=6.519;HRun=7;HaplotypeScore=49.4781;InbreedingCoeff=0.9651;MQ=74.45;MQ0=0;MQRankSum=-3.203;QD=24.89;ReadPosRankSum=1.114;VQSLOD=3.8994;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:36.02:0,36,335	0/0:5,0:5:12.02:0,12,116	0/0:12,0:12:29.99:0,30,275	0/0:10,0:10:24.03:0,24,229	0/0:34,0:34:87.14:0,87,840	0/0:20,0:20:51.06:0,51,486	0/0:13,0:13:30.04:0,30,290	0/0:25,0:25:57.05:0,57,534	0/0:14,0:14:42.07:0,42,406	0/0:30,0:30:78.11:0,78,746	0/0:34,0:34:99:0,102,985	0/0:21,0:21:63.10:0,63,608	0/0:26,0:26:63.07:0,63,601	0/0:20,0:20:57.07:0,57,545	0/0:22,0:22:57.07:0,57,544	0/0:14,0:14:42.07:0,42,405	1/1:1,13:14:33.10:399,33,0	1/1:4,13:17:42.11:495,42,0	0/0:19,0:19:48.07:0,48,463	0/0:31,0:31:90.13:0,90,864	0/0:11,0:11:33.05:0,33,319	0/0:24,0:24:69.11:0,69,666	0/0:23,0:23:63.10:0,63,608	0/0:8,0:8:20.98:0,21,193	0/0:29,0:29:81.12:0,81,778	0/0:24,0:24:63.10:0,63,608	0/0:28,0:28:75.12:0,75,724	0/0:5,0:5:12.02:0,12,116
chr10	27907461	.	CTT	C	5900.20	PASS	AB=1.000;AC=49;AF=0.875;AN=56;BaseQRankSum=-0.163;DP=527;FS=27.607;HRun=3;HaplotypeScore=94.5632;InbreedingCoeff=0.5154;MQ=60.15;MQ0=31;MQRankSum=1.786;QD=14.43;ReadPosRankSum=0.776;VQSLOD=0.7006;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:12,0:12:19.79:102,0,20	1/1:5,0:5:14.88:109,15,0	0/0:48,0:18:22.06:0,22,276	0/0:70,0:22:43.69:0,44,393	1/1:26,1:27:44.38:359,44,0	1/1:21,1:22:43.04:350,43,0	1/1:14,1:13:23.87:186,24,0	1/1:31,0:27:80.46:614,80,0	1/1:11,1:12:27.37:215,27,0	1/1:15,0:15:6.69:246,7,0	1/1:23,0:21:44.94:373,45,0	1/1:12,0:12:10.22:177,10,0	1/1:14,0:14:11.64:182,12,0	0/1:14,0:13:10.71:45,0,11	1/1:15,0:15:26.97:224,27,0	1/1:12,0:12:20.97:174,21,0	1/1:16,0:16:32.55:249,33,0	0/1:11,0:11:1.11:99,0,1	1/1:14,0:13:35.06:271,35,0	1/1:22,0:22:38.95:323,39,0	1/1:15,1:14:21.15:165,21,0	1/1:18,0:18:26.65:200,27,0	1/1:17,0:16:23.65:184,24,0	1/1:16,0:16:28.61:239,29,0	1/1:15,0:14:23.98:202,24,0	1/1:16,0:16:41.23:308,41,0	1/1:14,0:13:22.39:216,22,0	1/1:5,0:5:11.88:86,12,0
chr10	27907516	.	G	GACACAC	1802.50	PASS	AB=0.884;AC=34;AF=0.630;AN=54;BaseQRankSum=-0.164;DP=425;FS=41.496;HRun=0;HaplotypeScore=106.0148;InbreedingCoeff=0.0654;MQ=39.83;MQ0=34;MQRankSum=3.643;QD=7.24;ReadPosRankSum=-0.542;VQSLOD=0.4332;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:7,1:8:12.31:92,0,12	1/1:3,0:3:3.01:36,3,0	0/0:53,0:12:32.56:0,33,434	0/0:77,0:17:19.38:0,19,280	0/0:14,4:21:0.09:0,0,0	0/1:7,0:14:72.10:72,0,95	0/1:12,0:11:14.62:19,0,15	0/1:12,0:11:0.19:22,0,0	1/1:4,2:6:6.01:117,6,0	0/1:8,0:8:9.60:101,0,10	./.	1/1:9,1:9:2.45:23,2,0	1/1:4,7:12:2.25:416,2,0	0/1:10,1:13:25.77:135,0,26	0/1:13,0:13:0.16:1,0,0	0/0:7,4:12:0.02:0,0,1	0/1:11,0:12:22.95:26,0,23	0/0:6,0:6:3.54:0,4,69	1/1:11,0:13:8.49:110,8,0	1/1:21,0:21:5.85:46,6,0	1/1:15,0:14:11.23:178,11,0	0/1:8,0:10:0:0,0,0	1/1:3,3:8:3.01:51,3,0	1/1:11,1:9:8.39:64,8,0	1/1:6,5:14:0.94:2,1,0	1/1:6,3:13:10.22:160,10,0	0/1:8,1:12:44.21:175,0,44	1/1:1,2:3:3.01:98,3,0
chr10	27907518	.	T	TACAC	2975.39	PASS	AB=1.000;AC=49;AF=0.942;AN=52;BaseQRankSum=-0.523;DP=469;FS=2.434;HRun=0;HaplotypeScore=115.5924;InbreedingCoeff=-0.0303;MQ=39.94;MQ0=31;MQRankSum=-0.523;QD=8.73;ReadPosRankSum=-1.873;VQSLOD=2.5650;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:9,0:9:6:76,6,0	1/1:3,0:3:3.01:71,3,0	./.	./.	1/1:25,0:25:6.38:76,6,0	0/1:15,0:15:63.59:158,0,64	1/1:13,0:11:5.45:36,5,0	1/1:17,0:16:15.87:224,16,0	1/1:9,0:8:6.02:96,6,0	1/1:8,0:8:9.03:166,9,0	0/1:5,0:5:0:0,0,0	1/1:14,0:12:6.02:110,6,0	1/1:14,0:14:15.05:281,15,0	1/1:17,0:16:9.01:151,9,0	1/1:13,0:13:2.66:11,3,0	1/1:14,0:13:2.85:52,3,0	1/1:5,8:14:11.91:227,12,0	1/1:4,2:7:11.78:225,12,0	1/1:16,0:15:11.70:126,12,0	1/1:24,0:24:6.02:88,6,0	1/1:19,0:18:8.97:128,9,0	1/1:13,0:12:8.98:73,9,0	1/1:13,0:13:3.01:72,3,0	1/1:12,0:9:6.02:79,6,0	1/1:17,0:17:8.76:74,9,0	1/1:13,0:13:12.04:214,12,0	0/1:14,0:14:14.55:203,0,15	1/1:3,0:3:3.01:52,3,0
chr10	27907534	.	C	CACACAT	1065.21	PASS	AB=0.978;AC=18;AF=0.321;AN=56;BaseQRankSum=5.714;DP=475;FS=47.176;HRun=0;HaplotypeScore=117.4047;InbreedingCoeff=-0.3624;MQ=40.05;MQ0=25;MQRankSum=-2.063;QD=4.28;ReadPosRankSum=6.778;VQSLOD=-0.1254;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:11,0:10:56.42:66,0,56	0/1:6,0:6:17.63:18,0,39	0/0:36,0:8:11.97:0,12,104	0/0:61,0:17:20.15:0,20,191	0/0:26,0:26:12.04:0,12,98	0/0:18,0:18:3.47:0,3,270	0/0:13,0:12:8.96:0,9,75	0/0:18,0:17:47.48:0,47,362	0/1:13,0:12:61.90:62,0,92	0/1:9,0:9:25.95:100,0,26	0/0:6,0:6:5.99:0,6,49	0/0:15,0:13:14.92:0,15,115	0/1:14,0:14:36.88:319,0,37	0/1:17,0:16:1.23:111,0,1	0/1:6,11:17:0.06:1,0,0	0/1:14,0:13:0.17:1,0,0	0/1:16,0:16:28.11:28,0,100	0/1:9,0:9:25.02:25,0,109	0/1:15,0:13:58.49:58,0,161	0/1:24,0:24:15.36:15,0,123	0/1:25,0:24:99:105,0,116	0/0:15,0:14:6.59:0,7,49	0/1:12,0:12:16.83:17,0,62	0/1:17,0:14:10.98:11,0,120	0/0:18,0:18:3.27:0,3,21	0/1:14,0:14:92.74:93,0,182	0/1:13,0:13:99:112,0,120	0/1:3,0:3:16.96:71,0,17
chr10	27908821	.	GA	G	12408.71	PASS	AB=0.953;AC=50;AF=0.893;AN=56;BaseQRankSum=-6.926;DP=667;FS=16.573;HRun=10;HaplotypeScore=77.3936;InbreedingCoeff=0.5908;MQ=81.73;MQ0=0;MQRankSum=-3.335;QD=19.30;ReadPosRankSum=3.727;VQSLOD=4.1310;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,18:19:14.81:358,15,0	1/1:1,11:12:26.99:234,27,0	0/1:20,1:21:24.22:24,0,337	0/1:19,1:20:25.20:25,0,145	1/1:5,40:45:99:990,114,0	1/1:4,16:20:41.99:364,42,0	1/1:6,24:30:71.96:625,72,0	1/1:5,17:22:44.97:391,45,0	1/1:3,21:24:23.81:436,24,0	1/1:4,31:35:89.93:777,90,0	1/1:5,22:28:18.95:501,19,0	1/1:1,19:20:50.99:443,51,0	1/1:3,27:31:77.01:657,77,0	1/1:3,30:33:73.97:762,74,0	1/1:1,20:21:53.99:469,54,0	1/1:3,24:28:31.66:494,32,0	0/0:19,0:20:56.99:0,57,611	0/0:3,0:4:11.87:0,12,114	1/1:6,20:26:59.93:513,60,0	1/1:4,26:30:8.58:554,9,0	1/1:3,15:18:35.99:313,36,0	1/1:2,27:29:65.96:573,66,0	1/1:1,18:19:47.99:417,48,0	1/1:1,23:24:62.98:547,63,0	1/1:2,21:23:53.99:469,54,0	1/1:3,23:26:68.97:599,69,0	1/1:4,27:31:50.80:670,51,0	1/1:0,8:8:24:208,24,0
chr10	27909667	.	TG	T	1471.13	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-0.031;DP=490;FS=9.098;HRun=1;HaplotypeScore=66.4719;InbreedingCoeff=0.8778;MQ=65.16;MQ0=1;MQRankSum=-2.307;QD=33.43;ReadPosRankSum=2.923;VQSLOD=2.9283;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:84.22:0,84,1225	0/0:11,0:11:33.08:0,33,452	0/0:16,0:10:1.90:0,2,258	0/0:21,0:16:10.80:0,11,454	0/0:20,0:20:60.17:0,60,868	0/0:24,0:24:72.24:0,72,1094	0/0:20,0:20:60.20:0,60,914	0/0:29,0:29:87.43:0,87,1174	0/0:10,0:10:30.10:0,30,452	0/0:18,0:18:54.17:0,54,783	0/0:15,0:15:42.06:0,42,609	0/0:14,0:14:42.14:0,42,636	0/0:14,0:14:42.14:0,42,636	0/0:11,0:11:33.10:0,33,482	0/0:19,0:19:54.17:0,54,803	0/0:12,0:12:36.05:0,36,518	1/1:0,28:28:72.24:1006,72,0	1/1:0,16:16:42.14:587,42,0	0/0:13,0:12:36.11:0,36,525	0/0:13,0:13:39.09:0,39,529	0/0:16,0:15:45.15:0,45,679	0/0:17,0:17:47.18:0,47,665	0/0:8,0:8:24.08:0,24,362	0/0:26,0:26:69.22:0,69,1054	0/0:17,0:17:51.14:0,51,730	0/0:20,0:20:60.19:0,60,890	0/0:26,0:26:75.25:0,75,1125	0/0:5,0:5:15.05:0,15,226
chr10	27910210	.	ATTT	A	18728.25	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-4.821;DP=626;FS=0.000;HRun=11;HaplotypeScore=145.1231;InbreedingCoeff=0.9745;MQ=65.15;MQ0=0;MQRankSum=-5.674;QD=31.37;ReadPosRankSum=5.058;VQSLOD=2.9097;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,39:41:99:1297,99,0	1/1:1,12:13:36.11:473,36,0	0/0:17,0:19:38.01:0,38,588	0/0:9,0:9:14.59:0,15,157	1/1:4,31:35:66.13:867,66,0	1/1:0,18:18:45.15:591,45,0	1/1:3,17:20:42.11:552,42,0	1/1:9,25:34:75.15:970,75,0	1/1:1,16:17:42.13:552,42,0	1/1:2,28:30:84.25:1101,84,0	1/1:0,30:30:81.23:1064,81,0	1/1:3,18:21:51.13:670,51,0	1/1:2,21:23:53.81:709,54,0	1/1:1,16:17:45.14:591,45,0	1/1:3,21:24:57.16:749,57,0	1/1:2,25:27:75.23:986,75,0	1/1:3,29:32:78.19:1006,78,0	1/1:1,11:12:30.09:394,30,0	1/1:5,11:17:32.99:412,33,0	1/1:2,22:25:60.09:767,60,0	1/1:0,11:11:33.11:434,33,0	1/1:6,19:25:52.74:707,53,0	1/1:1,19:20:54.17:710,54,0	1/1:4,19:23:48.14:631,48,0	1/1:3,22:25:48.10:631,48,0	1/1:1,25:26:75.22:957,75,0	1/1:5,20:25:57.15:749,57,0	1/1:2,4:6:12.03:158,12,0
chr10	27910761	.	TC	T	15203.66	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=3.310;DP=625;FS=14.513;HRun=6;HaplotypeScore=73.0667;InbreedingCoeff=0.9991;MQ=75.56;MQ0=0;MQRankSum=-7.248;QD=27.74;ReadPosRankSum=4.759;VQSLOD=4.0471;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,25:27:72.18:774,72,0	1/1:0,11:11:33.08:355,33,0	0/0:33,0:33:84.25:0,84,1077	0/0:22,0:21:55.04:0,55,685	1/1:0,24:24:63.16:677,63,0	1/1:3,22:25:63.16:677,63,0	1/1:3,22:25:57.14:613,57,0	1/1:5,26:31:78.17:823,78,0	1/1:3,21:24:54.14:580,54,0	1/1:0,29:29:84.20:896,84,0	1/1:1,15:16:42.11:451,42,0	1/1:1,25:26:75.19:806,75,0	1/1:0,17:17:39.10:419,39,0	1/1:0,30:30:78.20:838,78,0	1/1:2,17:19:48.12:516,48,0	1/1:3,22:25:60.15:645,60,0	0/0:12,0:12:36.12:0,36,474	0/0:10,0:10:24.08:0,24,313	1/1:5,14:19:42.08:437,42,0	1/1:0,27:27:78.20:838,78,0	1/1:3,27:30:78.18:830,78,0	1/1:1,19:20:54.14:580,54,0	1/1:0,12:12:33.08:354,33,0	1/1:1,21:22:63.16:677,63,0	1/1:3,17:20:51.13:548,51,0	1/1:1,30:31:81.20:871,81,0	1/1:2,21:23:60.15:645,60,0	1/1:3,12:15:33.08:355,33,0
chr10	27912132	.	T	TAAC	20629.92	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=4.263;DP=473;FS=2.834;HRun=0;HaplotypeScore=88.9159;InbreedingCoeff=0.9783;MQ=80.21;MQ0=0;MQRankSum=-5.983;QD=49.59;ReadPosRankSum=2.708;VQSLOD=7.0577;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,13:16:30.57:668,31,0	1/1:0,5:5:12.04:268,12,0	0/0:14,0:14:36.12:0,36,557	0/0:13,0:13:33.03:0,33,476	1/1:2,28:31:60.07:1162,60,0	1/1:3,23:27:54.19:1204,54,0	1/1:1,14:15:30.10:667,30,0	1/1:5,23:30:75.21:1482,75,0	1/1:1,5:6:12.04:267,12,0	1/1:0,13:13:39.03:777,39,0	1/1:2,16:19:51.18:1121,51,0	1/1:2,11:13:33.11:736,33,0	1/1:0,17:17:51.18:1138,51,0	1/1:1,21:23:54.19:1202,54,0	1/1:0,22:22:54.19:1204,54,0	1/1:0,24:23:57.20:1271,57,0	0/0:16,0:16:45.14:0,45,705	0/0:14,0:14:39.13:0,39,621	1/1:4,13:17:39.10:782,39,0	1/1:1,15:16:38.99:727,39,0	1/1:1,19:21:51.18:1122,51,0	1/1:0,8:8:21.07:465,21,0	1/1:1,9:11:27.09:596,27,0	1/1:1,10:11:18.06:402,18,0	1/1:1,12:14:30.10:669,30,0	1/1:2,18:20:54.17:1161,54,0	1/1:2,18:21:45.15:1004,45,0	1/1:2,14:16:24.08:536,24,0
chr10	27913591	.	CT	C	19612.79	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-3.536;DP=707;FS=0.000;HRun=6;HaplotypeScore=77.3085;InbreedingCoeff=0.9932;MQ=75.98;MQ0=0;MQRankSum=-7.237;QD=28.76;ReadPosRankSum=5.450;VQSLOD=5.0152;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,35:39:99:1096,102,0	1/1:3,12:15:36.09:387,36,0	0/0:14,0:14:33.11:0,33,430	0/0:11,0:11:21.07:0,21,262	1/1:1,29:30:81.20:869,81,0	1/1:0,28:28:81.20:871,81,0	1/1:1,19:20:48.12:516,48,0	1/1:4,40:44:99:1290,123,0	1/1:1,20:21:54.14:580,54,0	1/1:5,18:23:54.13:580,54,0	1/1:0,24:24:72.18:774,72,0	1/1:1,21:22:57.14:612,57,0	1/1:1,30:31:90.23:967,90,0	1/1:1,25:26:72.18:774,72,0	1/1:0,25:25:66.17:709,66,0	1/1:0,27:27:75.09:806,75,0	1/1:4,36:40:99:1148,108,0	1/1:1,6:7:18.05:193,18,0	1/1:3,20:23:60.15:644,60,0	1/1:1,26:27:72.18:774,72,0	1/1:0,23:23:63.16:677,63,0	1/1:2,32:34:84.21:903,84,0	1/1:1,28:29:75.19:806,75,0	1/1:1,12:13:36.09:387,36,0	1/1:2,23:25:69.17:742,69,0	1/1:2,29:31:87.20:927,87,0	1/1:3,41:44:99:1258,117,0	1/1:1,10:11:30.07:322,30,0
chr10	27914247	.	G	GC	8527.15	PASS	AB=0.643;AC=44;AF=0.786;AN=56;BaseQRankSum=-1.935;DP=565;FS=1.229;HRun=9;HaplotypeScore=92.8251;InbreedingCoeff=0.1204;MQ=65.86;MQ0=0;MQRankSum=-4.680;QD=16.30;ReadPosRankSum=3.468;VQSLOD=5.1131;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:13,23:36:0.93:446,0,1	0/1:6,8:14:25.30:205,0,25	0/0:17,0:16:7.32:0,7,229	0/0:25,0:23:6.78:0,7,258	1/1:9,18:27:28.02:512,28,0	1/1:7,18:26:27.41:495,27,0	0/1:13,15:28:0.82:436,0,1	1/1:6,12:18:24.52:257,25,0	1/1:4,16:20:16.06:405,16,0	1/1:7,15:22:6.99:283,7,0	1/1:5,9:14:1.02:239,1,0	1/1:6,19:25:42.11:465,42,0	0/1:12,20:32:61.09:518,0,61	1/1:12,15:27:48.01:505,48,0	1/1:6,22:28:34.11:605,34,0	1/1:1,18:19:48.13:531,48,0	1/1:7,2:26:17.18:87,17,0	1/1:3,0:16:20.46:101,20,0	1/1:6,5:11:15.04:166,15,0	1/1:7,13:20:16.02:392,16,0	0/1:16,10:26:10.04:347,0,10	1/1:4,9:13:24.06:265,24,0	0/1:3,10:13:8.01:148,0,8	0/1:7,3:11:7.92:119,0,8	1/1:4,6:10:12.03:133,12,0	1/1:6,14:20:42.58:464,43,0	0/1:6,11:17:34.81:279,0,35	1/1:1,3:4:12.02:125,12,0
chr10	27914480	.	AG	A	11549.62	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=1.558;DP=505;FS=7.391;HRun=6;HaplotypeScore=94.7834;InbreedingCoeff=0.9805;MQ=59.79;MQ0=4;MQRankSum=1.402;QD=26.92;ReadPosRankSum=3.093;VQSLOD=4.9860;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,18:19:45.11:483,45,0	1/1:1,8:9:21.05:225,21,0	0/0:13,0:10:26.87:0,27,330	0/0:18,0:13:38.92:0,39,449	1/1:1,27:28:77.83:802,78,0	1/1:1,23:24:60.15:645,60,0	1/1:1,13:14:36.09:386,36,0	1/1:6,10:11:24.01:237,24,0	1/1:2,26:28:75.19:805,75,0	1/1:1,18:19:48.10:508,48,0	1/1:1,9:10:21.94:227,22,0	1/1:1,22:23:63.16:677,63,0	1/1:0,15:15:42.11:451,42,0	1/1:0,15:15:42.11:451,42,0	1/1:3,20:23:57.14:612,57,0	1/1:3,18:21:51.13:548,51,0	0/0:33,0:33:84.25:0,84,1087	0/0:12,0:12:33.11:0,33,433	1/1:2,13:13:36.09:386,36,0	1/1:1,20:21:51.13:548,51,0	1/1:5,15:20:42.10:451,42,0	1/1:1,12:13:33.08:355,33,0	1/1:0,14:14:41.97:433,42,0	1/1:1,17:18:45.11:483,45,0	1/1:1,9:10:27.07:290,27,0	1/1:1,23:24:69.17:741,69,0	1/1:2,24:26:66.16:708,66,0	1/1:0,4:4:9.02:97,9,0
chr10	27914636	.	GA	G	10014.26	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-3.700;DP=504;FS=0.000;HRun=10;HaplotypeScore=49.7744;InbreedingCoeff=0.8610;MQ=65.96;MQ0=0;MQRankSum=-0.394;QD=20.52;ReadPosRankSum=2.394;VQSLOD=5.6205;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,7:9:20.99:182,21,0	1/1:0,11:11:32.99:286,33,0	0/0:8,1:7:12.02:0,12,123	0/0:7,0:7:5.87:0,6,123	1/1:4,35:39:99:885,102,0	1/1:1,24:25:65.99:573,66,0	1/1:3,6:9:9.38:145,9,0	1/1:4,20:24:59.95:515,60,0	1/1:5,10:15:20.99:182,21,0	1/1:1,22:23:65.99:572,66,0	1/1:8,21:29:56.95:494,57,0	1/1:1,18:19:53.99:468,54,0	1/1:4,11:15:26.99:234,27,0	1/1:3,12:15:29.98:260,30,0	1/1:3,21:24:53.98:469,54,0	1/1:2,16:18:41.99:365,42,0	1/1:1,17:18:44.99:391,45,0	1/1:1,10:11:26.99:234,27,0	1/1:2,21:24:64.96:540,65,0	1/1:5,19:24:23.79:436,24,0	1/1:3,7:10:20.99:182,21,0	1/1:0,10:10:29.99:260,30,0	1/1:4,15:20:44.02:370,44,0	1/1:1,3:4:9:78,9,0	1/1:5,21:26:59.98:521,60,0	1/1:5,24:29:38.77:562,39,0	1/1:0,23:23:56.99:495,57,0	1/1:0,14:14:35.99:313,36,0
chr10	27917417	.	C	CAGA	33941.70	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-7.619;DP=568;FS=1.764;HRun=0;HaplotypeScore=72.6575;InbreedingCoeff=0.9942;MQ=74.25;MQ0=0;MQRankSum=-8.079;QD=62.51;ReadPosRankSum=4.501;VQSLOD=6.7698;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,28:28:66.23:1605,66,0	1/1:1,16:19:51.18:1238,51,0	0/0:15,0:15:39.13:0,39,691	0/0:10,0:10:30.10:0,30,548	1/1:0,28:28:75.26:1826,75,0	1/1:4,29:33:90.31:2179,90,0	1/1:2,12:15:33.11:777,33,0	1/1:3,25:31:87.27:1946,87,0	1/1:0,12:12:33.11:813,33,0	1/1:1,22:25:75.24:1748,75,0	1/1:1,23:25:60.21:1458,60,0	1/1:2,18:21:45.15:1094,45,0	1/1:0,29:30:81.28:1996,81,0	1/1:1,17:21:54.19:1311,54,0	1/1:0,23:24:66.23:1625,66,0	1/1:0,27:27:78.27:1905,78,0	1/1:1,12:15:33.11:772,33,0	1/1:0,15:16:36.12:871,36,0	1/1:0,16:17:51.16:1204,51,0	1/1:0,19:19:51.18:1257,51,0	1/1:1,11:12:26.97:666,27,0	1/1:0,16:16:48.16:1182,48,0	1/1:1,15:17:29.90:739,30,0	1/1:2,10:12:18.06:444,18,0	1/1:2,16:19:48.16:1109,48,0	1/1:1,18:19:57.20:1365,57,0	1/1:2,26:29:81.28:1924,81,0	1/1:2,11:13:36.12:886,36,0
chr10	27918534	.	A	AAGGAGG	38004.94	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-12.277;DP=656;FS=17.682;HRun=0;HaplotypeScore=97.9943;InbreedingCoeff=0.9834;MQ=82.54;MQ0=0;MQRankSum=-13.261;QD=67.62;ReadPosRankSum=4.254;VQSLOD=4.1539;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,26:32:60.20:1915,60,0	1/1:1,7:10:12.04:431,12,0	0/0:30,0:30:34.55:0,35,1484	0/0:27,0:27:75.21:0,75,1650	1/1:2,19:23:36.12:1241,36,0	1/1:0,28:28:60.21:2153,60,0	1/1:0,23:24:39.13:1348,39,0	1/1:3,17:23:60.18:1632,60,0	1/1:0,27:29:72.25:2584,72,0	1/1:0,23:24:60.21:2057,60,0	1/1:0,11:12:18.06:645,18,0	1/1:1,27:29:63.22:2251,63,0	1/1:2,34:39:87.30:3012,87,0	1/1:2,26:30:54.18:1830,54,0	1/1:1,27:30:63.08:2176,63,0	1/1:0,29:30:69.24:2469,69,0	0/0:21,0:21:57.20:0,57,1354	0/0:16,0:16:45.15:0,45,1077	1/1:1,13:16:48.16:1403,48,0	1/1:0,13:17:36.08:1099,36,0	1/1:2,22:29:27.09:969,27,0	1/1:0,19:21:48.16:1613,48,0	1/1:1,10:14:24.08:861,24,0	1/1:0,19:22:17.29:633,17,0	1/1:0,28:30:60.21:2034,60,0	1/1:0,17:18:45.15:1491,45,0	1/1:1,23:25:42.14:1509,42,0	1/1:0,7:7:18.06:647,18,0
chr10	27918722	.	T	TA	25303.99	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-6.308;DP=684;FS=10.932;HRun=2;HaplotypeScore=66.9722;InbreedingCoeff=0.9984;MQ=83.59;MQ0=0;MQRankSum=-10.314;QD=39.72;ReadPosRankSum=6.357;VQSLOD=4.0393;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,38:38:99:1466,108,0	1/1:1,12:13:36.11:497,36,0	0/0:25,0:25:61.12:0,61,730	0/0:22,0:22:43.99:0,44,530	1/1:2,34:36:99:1504,108,0	1/1:3,33:36:96.19:1312,96,0	1/1:0,20:20:51.17:729,51,0	1/1:2,19:21:57.17:781,57,0	1/1:0,27:27:81.27:1157,81,0	1/1:2,37:39:99:1601,114,0	1/1:0,22:22:66.05:892,66,0	1/1:1,13:14:39.10:535,39,0	1/1:1,32:33:96.32:1369,96,0	1/1:1,17:18:48.16:683,48,0	1/1:1,24:25:69.20:955,69,0	1/1:1,26:26:75.25:1070,75,0	1/1:0,30:30:90.30:1285,90,0	1/1:0,8:8:24.08:343,24,0	1/1:0,23:23:69.23:986,69,0	1/1:1,27:28:81.19:1111,81,0	1/1:1,11:12:30.10:429,30,0	1/1:0,26:26:75.21:1050,75,0	1/1:0,22:22:63.21:902,63,0	1/1:0,22:22:54.10:746,54,0	1/1:1,36:37:99:1487,105,0	1/1:0,34:34:99:1451,102,0	1/1:3,10:14:33.10:448,33,0	1/1:0,12:12:36.12:515,36,0
chr10	27918800	.	A	ATGTGTGTG	32150.73	PASS	AB=0.714;AC=51;AF=0.911;AN=56;BaseQRankSum=-2.111;DP=560;FS=15.988;HRun=0;HaplotypeScore=231.8161;InbreedingCoeff=0.7064;MQ=42.66;MQ0=1;MQRankSum=-3.297;QD=60.55;ReadPosRankSum=4.355;VQSLOD=3.4194;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:23,9:33:33.38:1359,33,0	1/1:6,4:10:27.08:928,27,0	0/0:8,0:5:7.77:0,8,50	0/0:20,0:11:22.48:0,22,303	1/1:16,12:29:44.78:1518,45,0	1/1:22,11:34:48.12:1669,48,0	1/1:2,10:20:33.11:1272,33,0	1/1:10,12:31:60.17:1684,60,0	1/1:11,9:20:36.12:1398,36,0	1/1:11,1:18:36.12:1104,36,0	1/1:15,0:29:60.19:1762,60,0	1/1:11,10:23:48.16:1717,48,0	1/1:14,7:21:36.12:1426,36,0	1/1:9,10:19:39.12:1400,39,0	1/1:10,9:19:38.16:1458,38,0	1/1:15,9:23:48.08:1719,48,0	1/1:11,0:15:27.09:812,27,0	1/1:3,0:4:6:130,6,0	1/1:16,3:18:21.06:720,21,0	1/1:13,12:26:45.15:1764,45,0	1/1:8,4:11:15.04:488,15,0	1/1:9,5:14:24.07:882,24,0	1/1:10,11:21:34.67:1311,35,0	0/1:9,6:15:10.66:469,0,11	1/1:15,8:24:42.14:1462,42,0	1/1:10,5:16:39.12:1095,39,0	1/1:13,11:25:51.18:2032,51,0	1/1:6,3:10:15.05:573,15,0
chr10	27918830	.	TGTGTGTGTGTGC	T	3695.36	PASS	AB=0.991;AC=25;AF=0.446;AN=56;BaseQRankSum=3.364;DP=540;FS=46.729;HRun=0;HaplotypeScore=297.6270;InbreedingCoeff=-0.6825;MQ=42.42;MQ0=14;MQRankSum=-5.305;QD=7.90;ReadPosRankSum=-4.301;VQSLOD=0.4758;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:30:31.42:78,0,31	0/1:8,0:8:18.07:81,0,18	0/1:31,0:7:3.14:3,0,29	0/1:36,0:17:37.44:37,0,69	0/1:25,1:26:41.18:64,0,41	0/1:33,0:32:44.23:351,0,44	0/1:22,0:21:15.16:44,0,15	0/0:24,0:24:51.94:0,52,388	0/1:18,0:17:78.15:99,0,78	0/1:13,0:13:99:129,0,127	0/1:22,0:22:17.45:83,0,17	0/1:20,0:20:99:237,0,100	0/1:17,1:18:68.03:353,0,68	0/1:16,0:16:72.87:73,0,78	0/1:24,0:22:17.89:480,0,18	0/1:24,0:23:56.35:84,0,56	0/1:16,0:15:26.97:184,0,27	0/1:5,0:5:50.08:50,0,50	0/1:13,1:14:88.28:88,0,117	0/0:16,0:16:5.81:0,6,40	0/0:14,0:13:14.66:0,15,96	0/1:15,0:15:60.03:174,0,60	1/1:14,0:14:3:49,3,0	0/1:16,0:14:15.05:94,0,15	0/0:18,0:16:8.98:0,9,74	0/1:17,1:18:99:445,0,126	0/1:20,0:20:99:281,0,129	0/1:9,0:8:62.93:133,0,63
chr10	27918842	.	CGTGTGTGTGTGT	C	5451.68	PASS	AB=0.901;AC=44;AF=0.846;AN=52;BaseQRankSum=0.951;DP=542;FS=4.403;HRun=0;HaplotypeScore=277.8130;InbreedingCoeff=-0.2458;MQ=37.61;MQ0=22;MQRankSum=-0.603;QD=11.17;ReadPosRankSum=3.103;VQSLOD=3.1445;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:27,2:30:8.72:164,9,0	1/1:7,1:8:3.01:103,3,0	./.	./.	0/1:23,2:27:27.22:110,0,27	1/1:29,6:34:21.40:519,21,0	0/1:16,2:17:10.76:62,0,11	0/1:26,0:23:4.57:31,0,5	1/1:16,3:17:8.70:165,9,0	1/1:11,1:12:8.03:193,8,0	1/1:20,1:21:3.60:105,4,0	0/1:18,2:21:11.14:277,0,11	1/1:15,3:19:17.83:461,18,0	1/1:13,2:15:6.02:138,6,0	1/1:14,5:19:17.87:580,18,0	1/1:23,2:24:12.40:316,12,0	0/1:11,1:15:45.45:210,0,45	0/1:6,0:7:35.02:76,0,35	0/1:11,0:11:31.64:100,0,32	1/1:18,1:18:5.98:102,6,0	1/1:17,0:16:5.81:61,6,0	1/1:15,3:18:6.64:208,7,0	1/1:15,0:15:3:74,3,0	1/1:18,1:17:2.47:103,2,0	0/1:20,0:18:17.97:22,0,18	1/1:14,2:16:18:571,18,0	1/1:17,4:21:17.68:463,18,0	1/1:8,1:8:9.03:239,9,0
chr10	27920916	.	G	GTAAAA	21054.56	PASS	AB=0.583;AC=51;AF=0.911;AN=56;BaseQRankSum=2.152;DP=382;FS=11.428;HRun=0;HaplotypeScore=182.8221;InbreedingCoeff=0.6886;MQ=35.48;MQ0=1;MQRankSum=-4.133;QD=60.33;ReadPosRankSum=3.865;VQSLOD=4.8124;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:12,6:21:45.02:977,45,0	1/1:6,1:8:14.88:285,15,0	0/0:21,0:14:35.91:0,36,624	0/0:12,0:8:20.86:0,21,379	1/1:14,4:19:51.05:1007,51,0	1/1:8,5:14:39.13:914,39,0	1/1:5,2:9:20.99:506,21,0	1/1:20,21:43:99:3032,118,0	1/1:0,2:3:6.02:193,6,0	1/1:5,6:11:33.10:792,33,0	1/1:12,5:17:51.17:1220,51,0	1/1:4,0:4:8.94:141,9,0	1/1:7,1:8:21.07:529,21,0	1/1:7,4:13:33.11:876,33,0	1/1:7,5:14:33.11:821,33,0	1/1:5,3:9:21.07:540,21,0	1/1:9,7:18:45.05:1025,45,0	0/1:2,4:7:65.92:369,0,66	1/1:8,2:12:26.67:467,27,0	1/1:13,7:20:60.20:1433,60,0	1/1:2,4:6:9.03:288,9,0	1/1:3,2:7:15.05:310,15,0	1/1:3,5:8:18.06:522,18,0	1/1:5,1:6:18.02:283,18,0	1/1:18,9:29:75.25:1613,75,0	1/1:3,9:14:39.13:1123,39,0	1/1:7,6:14:39.13:1020,39,0	1/1:9,3:11:33.11:766,33,0
chr10	27921067	.	GCA	G	5579.17	PASS	AB=0.667;AC=51;AF=0.911;AN=56;BaseQRankSum=5.061;DP=547;FS=13.626;HRun=0;HaplotypeScore=217.6818;InbreedingCoeff=0.5563;MQ=49.61;MQ0=5;MQRankSum=-1.923;QD=12.05;ReadPosRankSum=6.177;VQSLOD=3.3484;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:19,10:28:20.93:166,21,0	1/1:7,5:12:4.67:119,5,0	0/0:38,1:19:6.43:0,6,509	0/0:44,1:27:38.49:0,38,560	1/1:17,8:25:34.95:331,35,0	1/1:8,6:13:23.68:155,24,0	1/1:7,7:14:11.85:94,12,0	1/1:15,10:24:41.82:430,42,0	1/1:12,3:15:26.80:238,27,0	1/1:15,7:21:21:416,21,0	1/1:9,6:15:26.54:200,27,0	1/1:19,8:26:41.28:272,41,0	1/1:20,5:24:38.56:325,39,0	1/1:21,10:28:55.68:355,56,0	1/1:21,3:24:44.92:363,45,0	1/1:18,2:20:38.85:351,39,0	1/1:9,0:9:8.91:62,9,0	1/1:7,0:7:8.85:93,9,0	0/1:7,7:13:32.60:254,0,33	1/1:14,5:19:32.70:282,33,0	1/1:18,4:21:2.39:20,2,0	1/1:5,3:8:14.79:124,15,0	1/1:9,3:12:17.68:140,18,0	1/1:15,6:21:9.18:51,9,0	1/1:12,7:19:32.62:246,33,0	1/1:15,5:20:16.88:219,17,0	1/1:8,1:9:12.02:135,12,0	1/1:4,1:5:14.96:138,15,0
chr10	27921072	.	C	CAG	7357.17	PASS	AB=0.879;AC=50;AF=0.893;AN=56;BaseQRankSum=6.436;DP=594;FS=47.688;HRun=0;HaplotypeScore=254.7714;InbreedingCoeff=0.5947;MQ=46.25;MQ0=7;MQRankSum=-3.606;QD=14.74;ReadPosRankSum=7.001;VQSLOD=3.0977;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:29,8:36:12.73:225,13,0	1/1:7,4:11:16.92:199,17,0	0/0:45,0:21:62.72:0,63,685	0/0:50,0:29:77.42:0,77,1005	1/1:19,6:25:44.03:429,44,0	1/1:9,4:12:26.74:232,27,0	1/1:18,2:20:22.25:182,22,0	1/1:27,4:30:44.15:483,44,0	1/1:10,6:16:29.09:265,29,0	1/1:12,8:19:36.61:582,37,0	1/1:10,6:16:26.54:210,27,0	1/1:20,10:29:41.17:364,41,0	1/1:21,7:27:57.65:490,58,0	1/1:18,14:29:55.66:512,56,0	1/1:17,8:25:49.70:458,50,0	1/1:16,4:20:44.87:455,45,0	1/1:5,2:7:11.97:100,12,0	0/1:6,1:7:0.68:62,0,1	0/1:13,2:14:52.83:303,0,53	1/1:14,6:20:40.70:341,41,0	1/1:20,6:25:2.02:33,2,0	1/1:9,1:10:17.30:150,17,0	1/1:9,3:12:20.61:196,21,0	1/1:19,3:23:9.17:76,9,0	1/1:14,7:21:37.81:329,38,0	1/1:16,3:19:35.76:352,36,0	1/1:9,1:10:17.32:149,17,0	1/1:3,2:5:15.04:178,15,0
chr10	27921086	.	CAT	C	2974.14	PASS	AB=0.816;AC=39;AF=0.696;AN=56;BaseQRankSum=9.441;DP=615;FS=10.858;HRun=0;HaplotypeScore=299.0435;InbreedingCoeff=-0.1072;MQ=38.77;MQ0=17;MQRankSum=-4.992;QD=5.88;ReadPosRankSum=7.438;VQSLOD=1.4322;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:28,9:36:12.34:76,0,12	0/1:7,4:11:0.92:92,0,1	0/0:56,0:23:53.31:0,53,868	0/0:52,0:20:54.40:0,54,815	0/1:16,6:22:19.54:83,0,20	1/1:8,4:11:23.01:123,23,0	1/1:19,2:21:5.92:95,6,0	0/1:37,4:39:22.19:423,0,22	1/1:9,6:15:3.26:63,3,0	1/1:12,8:19:3.60:302,4,0	0/1:14,6:20:6.93:69,0,7	1/1:21,10:30:21.75:196,22,0	0/1:17,7:23:17.66:146,0,18	1/1:16,14:27:32.02:218,32,0	1/1:16,8:24:3.77:153,4,0	0/1:9,5:14:4.62:135,0,5	1/1:1,2:3:5.79:32,6,0	0/1:5,2:7:8.19:45,0,8	0/1:12,2:14:98.54:99,0,147	0/1:17,6:23:36.83:72,0,37	1/1:20,6:25:1.85:15,2,0	0/1:11,1:12:2.03:60,0,2	0/1:10,3:13:0.08:68,0,0	1/1:23,2:25:7.78:36,8,0	1/1:15,7:22:5.92:142,6,0	1/1:21,3:24:32.59:279,33,0	0/1:9,1:10:37.01:53,0,37	1/1:3,2:5:8.81:55,9,0
chr10	27921088	.	T	TAC	7223.68	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=5.528;DP=619;FS=33.969;HRun=0;HaplotypeScore=289.5466;InbreedingCoeff=0.6370;MQ=38.34;MQ0=17;MQRankSum=-3.266;QD=14.22;ReadPosRankSum=1.748;VQSLOD=3.3552;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:30,7:36:22.05:219,22,0	1/1:11,0:11:14.70:211,15,0	0/0:57,0:21:48:0,48,538	0/0:54,0:19:51.77:0,52,561	1/1:23,0:23:20.81:231,21,0	1/1:12,0:11:23.82:261,24,0	1/1:20,1:21:13.29:178,13,0	1/1:34,6:39:56.95:861,57,0	1/1:13,2:15:17.15:178,17,0	1/1:19,0:18:49.86:649,50,0	1/1:17,2:19:19.87:215,20,0	1/1:31,0:30:46.53:485,47,0	1/1:23,1:23:37.86:395,38,0	1/1:31,0:28:52.37:559,52,0	1/1:23,1:24:38.07:410,38,0	1/1:14,0:14:23.41:290,23,0	1/1:3,0:3:6.02:67,6,0	1/1:6,0:7:1.83:40,2,0	1/1:15,0:15:20.88:239,21,0	1/1:23,0:23:18.55:222,19,0	1/1:25,2:27:2.30:32,2,0	1/1:12,0:12:10.67:140,11,0	1/1:14,0:14:13.57:170,14,0	1/1:20,4:24:8.74:88,9,0	1/1:20,2:22:31.97:353,32,0	1/1:24,0:24:33.07:498,33,0	1/1:9,1:10:0.82:124,1,0	1/1:5,0:5:9.03:106,9,0
chr10	27921095	.	ACATT	A	4981.15	PASS	AB=0.741;AC=48;AF=0.857;AN=56;BaseQRankSum=6.474;DP=592;FS=29.313;HRun=0;HaplotypeScore=302.1202;InbreedingCoeff=0.2961;MQ=37.41;MQ0=17;MQRankSum=-1.112;QD=10.40;ReadPosRankSum=-2.612;VQSLOD=2.9491;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:26,9:34:21.15:194,21,0	0/1:7,4:11:22.56:91,0,23	0/0:55,0:21:56.51:0,57,1057	0/0:58,0:23:16.94:0,17,931	1/1:11,9:20:18.89:164,19,0	1/1:5,7:11:14.39:109,14,0	1/1:13,7:20:0.38:141,0,0	1/1:39,6:43:42.69:1059,43,0	0/1:9,5:14:3.29:44,0,3	0/1:13,9:21:83.94:313,0,84	1/1:9,9:18:17.40:113,17,0	1/1:15,15:29:43.40:201,43,0	1/1:14,6:19:39.83:323,40,0	1/1:15,15:27:48.76:307,49,0	1/1:16,7:23:26.88:199,27,0	1/1:8,4:12:17.54:200,18,0	1/1:3,0:3:5.85:49,6,0	1/1:6,0:6:9.03:125,9,0	0/1:8,3:11:25.89:165,0,26	1/1:9,10:19:17.06:122,17,0	1/1:26,2:26:3.34:62,3,0	1/1:4,8:12:8.84:67,9,0	1/1:10,5:15:9.61:59,10,0	1/1:13,6:19:6.29:45,6,0	1/1:11,10:21:27.94:189,28,0	1/1:11,9:20:28.04:445,28,0	1/1:5,3:8:14.64:171,15,0	1/1:2,3:5:5.64:23,6,0
chr10	27921098	.	TTC	T	192.60	PASS	AB=1.000;AC=12;AF=0.214;AN=56;BaseQRankSum=3.305;DP=562;FS=10.751;HRun=0;HaplotypeScore=300.6782;InbreedingCoeff=-0.0048;MQ=37.13;MQ0=15;MQRankSum=-1.787;QD=0.99;ReadPosRankSum=-2.052;VQSLOD=0.8198;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:32:7.56:8,0,23	0/0:9,0:9:17.86:0,18,143	0/0:57,0:23:56.35:0,56,992	0/0:58,0:22:46.31:0,46,897	0/0:20,0:20:6.55:0,7,52	0/0:12,0:11:22.23:0,22,134	0/1:19,0:19:31.64:32,0,57	0/1:40,0:37:99:184,0,243	0/0:13,0:13:16.32:0,16,87	0/1:20,0:20:20.53:21,0,318	0/0:18,0:18:12.99:0,13,89	0/0:30,0:29:33.21:0,33,265	0/1:18,0:17:0.13:0,0,122	0/0:30,0:27:34.36:0,34,242	0/0:21,0:21:28.49:0,28,189	0/0:10,0:10:11.91:0,12,77	0/0:2,0:2:5.60:0,6,41	1/1:5,0:5:0.22:18,0,0	0/1:9,0:9:12.05:12,0,104	0/0:17,0:17:12.66:0,13,88	1/1:23,3:25:0.87:16,1,0	0/0:12,0:12:10.98:0,11,62	0/0:14,0:14:14.71:0,15,97	0/0:16,3:19:5.79:0,6,37	0/0:19,0:19:18.49:0,18,135	0/1:18,0:18:22.88:23,0,139	0/1:7,0:7:9.95:15,0,10	0/0:5,0:5:8.90:0,9,65
chr10	27921099	.	T	TCACACA	6616.88	PASS	AB=0.872;AC=37;AF=0.661;AN=56;BaseQRankSum=7.141;DP=576;FS=13.769;HRun=0;HaplotypeScore=301.4013;InbreedingCoeff=0.5220;MQ=36.82;MQ0=16;MQRankSum=-3.688;QD=17.88;ReadPosRankSum=1.660;VQSLOD=3.0999;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:24,10:33:3.72:70,4,0	1/1:8,1:9:8.98:193,9,0	0/0:58,0:25:59.77:0,60,1014	0/0:59,0:23:43.39:0,43,798	0/1:17,3:20:0.05:0,0,1	0/0:10,1:10:0:0,0,0	1/1:19,0:20:9.85:275,10,0	1/1:43,0:41:77.16:1582,77,0	0/0:7,5:13:1.17:0,1,2	1/1:17,3:20:31.56:1253,32,0	0/0:15,5:20:1.41:0,1,3	1/1:26,4:29:11.64:255,12,0	1/1:12,4:16:17.99:408,18,0	1/1:22,8:28:8.65:225,9,0	0/1:19,2:21:0.31:0,0,0	1/1:10,1:11:0.12:0,0,0	1/1:2,0:2:2.84:14,3,0	1/1:5,0:5:6.19:86,6,0	1/1:7,2:9:21.07:615,21,0	0/0:14,3:17:0:0,0,1	1/1:22,5:25:0.41:52,0,0	0/0:11,1:12:0.43:0,0,1	0/0:12,1:14:0.40:0,0,1	0/1:16,4:20:0:0,0,2	1/1:14,4:19:1.61:49,2,0	1/1:17,2:19:44.62:1022,45,0	1/1:5,2:7:12.24:271,12,0	1/1:3,2:5:12:246,12,0
chr10	27921102	.	CAT	C	796.44	PASS	AB=0.901;AC=31;AF=0.554;AN=56;BaseQRankSum=6.791;DP=574;FS=5.177;HRun=0;HaplotypeScore=307.3287;InbreedingCoeff=0.1916;MQ=36.44;MQ0=16;MQRankSum=-1.408;QD=1.96;ReadPosRankSum=-0.059;VQSLOD=1.7674;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:30,2:31:4.69:5,0,10	0/1:10,0:10:0.56:1,0,4	0/0:60,0:26:77.46:0,77,1167	0/0:59,0:22:53.68:0,54,843	0/1:16,4:20:0.08:0,0,0	0/0:11,0:10:0:0,0,0	0/1:14,7:21:1.53:31,0,2	0/1:32,13:41:62.44:436,0,62	1/1:13,0:13:5.14:34,5,0	0/1:20,1:21:64.15:64,0,75	0/1:19,1:20:0.02:0,0,2	1/1:28,1:28:2.96:10,3,0	1/1:16,0:15:14.62:66,15,0	0/1:31,0:28:2.23:15,0,2	0/1:17,3:20:0.03:0,0,1	0/0:9,2:11:0.45:0,0,1	1/1:2,0:2:2.88:15,3,0	1/1:5,0:5:8.86:58,9,0	0/1:7,1:8:20.47:38,0,20	0/1:17,1:18:0.02:0,0,3	1/1:21,7:26:1.12:15,1,0	0/1:11,1:12:0.05:0,0,1	0/1:12,2:14:0.02:0,0,2	0/0:20,1:21:0.47:0,0,2	1/1:20,0:20:0.13:3,0,0	1/1:15,2:17:2.11:100,2,0	1/1:5,0:5:8.50:34,9,0	0/0:5,0:5:4.29:0,4,16
chr10	27921112	.	CACATGCATAT	C	3655.22	PASS	AB=0.986;AC=28;AF=0.500;AN=56;BaseQRankSum=8.703;DP=590;FS=13.648;HRun=0;HaplotypeScore=326.2000;InbreedingCoeff=0.2248;MQ=34.26;MQ0=17;MQRankSum=-1.165;QD=10.47;ReadPosRankSum=4.457;VQSLOD=0.8505;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:32,0:31:11.26:20,0,11	1/1:10,0:10:11.79:174,12,0	0/0:61,0:27:75.24:0,75,2478	0/0:60,0:22:28.81:0,29,2068	0/1:18,1:19:0.02:0,0,1	0/1:9,0:8:0:0,0,0	1/1:25,0:25:6.94:123,7,0	0/1:49,0:38:99:534,0,174	0/1:15,0:15:0.67:1,0,1	1/1:20,1:21:34.33:759,34,0	0/1:19,1:21:0.10:0,0,2	1/1:28,1:28:11.03:148,11,0	1/1:17,0:16:10.70:270,11,0	1/1:30,0:27:4.42:122,4,0	0/0:18,2:20:0.35:0,0,1	0/0:9,2:11:0.47:0,0,1	1/1:1,0:1:3.01:41,3,0	0/1:5,0:5:29.62:115,0,30	0/1:11,0:11:17.24:324,0,17	0/0:19,0:19:0.47:0,0,3	0/1:26,0:24:9.02:9,0,10	0/0:14,0:14:0:0,0,2	0/0:13,0:13:1.40:0,1,4	0/0:22,0:22:0.47:0,0,1	0/0:20,0:20:3.47:0,3,31	1/1:17,0:17:37.56:667,38,0	0/1:7,0:7:12.23:220,0,12	1/1:5,0:5:11.11:128,11,0
chr10	27921114	.	CATGCATAT	C	3394.74	PASS	AB=0.961;AC=25;AF=0.446;AN=56;BaseQRankSum=8.490;DP=574;FS=17.249;HRun=0;HaplotypeScore=311.4044;InbreedingCoeff=0.2413;MQ=34.55;MQ0=15;MQRankSum=-1.584;QD=11.63;ReadPosRankSum=4.551;VQSLOD=0.9180;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:30,1:30:11.85:28,0,12	1/1:10,0:10:12.15:164,12,0	0/0:59,0:28:78.16:0,78,2429	0/0:59,0:23:44.67:0,45,1976	0/0:19,0:19:0.44:0,0,2	0/0:9,0:8:0:0,0,0	1/1:23,2:25:7.91:101,8,0	0/1:47,0:36:99:477,0,149	0/1:15,0:15:0.01:0,0,1	1/1:19,2:21:42.36:674,42,0	0/0:18,1:20:0.85:0,1,3	1/1:25,1:25:11.17:134,11,0	1/1:14,3:16:8.56:244,9,0	1/1:27,1:26:4.39:119,4,0	0/0:17,3:20:0.33:0,0,1	0/0:10,0:10:0.47:0,0,1	1/1:0,1:1:3.01:88,3,0	0/1:4,1:5:27.86:171,0,28	0/1:11,1:11:24.43:282,0,24	0/0:18,0:18:0.47:0,0,3	0/1:25,0:23:7.06:7,0,10	0/0:11,3:14:0.47:0,0,3	0/0:11,2:13:1.89:0,2,5	0/0:20,2:22:0.94:0,1,2	0/0:19,0:19:4.83:0,5,31	1/1:17,0:17:25.77:583,26,0	0/1:7,0:7:9.24:208,0,9	1/1:5,0:5:9.87:117,10,0
chr10	27921115	.	ATG	A	615.51	PASS	AB=0.670;AC=23;AF=0.411;AN=56;BaseQRankSum=6.880;DP=519;FS=3.569;HRun=0;HaplotypeScore=275.5361;InbreedingCoeff=0.0855;MQ=35.13;MQ0=15;MQRankSum=0.381;QD=2.39;ReadPosRankSum=1.775;VQSLOD=1.7898;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:15,10:25:0.76:0,1,12	1/1:2,5:7:5.69:55,6,0	0/0:57,0:28:77.92:0,78,1378	0/0:57,0:22:60.03:0,60,1055	0/1:7,10:17:0.11:0,0,0	0/0:1,7:7:0:0,0,0	0/0:17,7:24:6.22:0,6,81	0/0:38,3:30:0.02:0,0,490	0/1:5,8:13:0.17:0,0,1	0/1:7,10:17:92.73:198,0,93	0/1:10,9:19:0.11:0,0,2	0/1:7,16:22:0.08:16,0,0	1/1:8,7:15:2.65:54,3,0	0/1:10,15:23:1.25:4,0,1	0/1:8,7:15:0.36:0,0,1	0/0:3,5:8:0.47:0,0,1	1/1:1,0:1:3:27,3,0	0/1:5,0:5:24.26:65,0,24	0/1:8,3:10:22.75:23,0,146	0/1:5,10:15:0:0,0,2	0/0:21,3:22:3.80:0,4,17	0/1:5,9:14:0.08:0,0,1	0/1:6,6:12:0.03:0,0,2	0/1:13,7:20:0:0,0,1	0/0:6,10:16:2.87:0,3,26	0/1:6,11:17:53.23:172,0,53	0/1:2,5:7:28.46:56,0,28	1/1:2,3:5:0.14:62,0,0
chr10	27921118	.	CATAT	C	759.31	PASS	AB=0.746;AC=13;AF=0.232;AN=56;BaseQRankSum=7.188;DP=508;FS=0.000;HRun=0;HaplotypeScore=279.9516;InbreedingCoeff=-0.1293;MQ=31.71;MQ0=13;MQRankSum=-1.198;QD=4.39;ReadPosRankSum=3.208;VQSLOD=1.8104;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:16,10:25:1.68:0,2,13	1/1:2,5:7:5.96:43,6,0	0/0:52,0:24:68.93:0,69,1571	0/0:51,0:22:49.38:0,49,1371	0/0:7,10:17:0.47:0,0,2	0/0:1,7:7:0:0,0,0	0/0:17,7:24:10.50:0,10,63	0/1:36,3:28:42.13:42,0,483	0/0:9,4:13:0.15:0,0,1	0/1:8,9:17:88.37:254,0,88	0/0:9,9:19:0.88:0,1,2	0/1:7,15:21:13.05:13,0,15	0/1:8,7:15:32.75:59,0,33	0/1:9,15:23:4.16:16,0,4	0/0:8,7:15:0:0,0,2	0/0:3,5:8:0.47:0,0,1	0/1:3,0:3:24.02:24,0,29	0/1:4,0:4:23.88:24,0,24	0/1:9,3:11:37.67:38,0,117	0/0:5,10:15:0:0,0,2	0/0:24,1:23:6.21:0,6,19	0/0:5,9:14:0:0,0,2	0/0:5,6:12:0.94:0,1,3	0/0:13,7:20:0.94:0,1,2	0/0:5,10:16:3.48:0,3,36	0/1:6,11:17:82.51:236,0,83	0/1:4,3:7:21.61:78,0,22	0/1:2,3:5:16.41:58,0,16
chr10	27921122	.	TAC	T	1971.87	PASS	AB=0.833;AC=41;AF=0.732;AN=56;BaseQRankSum=6.231;DP=545;FS=23.376;HRun=0;HaplotypeScore=274.7070;InbreedingCoeff=0.4128;MQ=27.48;MQ0=14;MQRankSum=-1.510;QD=4.53;ReadPosRankSum=2.954;VQSLOD=1.6101;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:15,11:25:2.83:30,3,0	1/1:6,2:8:5.94:56,6,0	0/0:52,0:25:56.93:0,57,891	0/0:48,0:19:48.03:0,48,727	0/1:13,6:19:0:1,0,0	0/1:9,1:9:0:0,0,0	1/1:14,12:26:2.68:40,3,0	1/1:18,22:29:39.58:493,40,0	0/1:9,5:14:0.25:1,0,0	1/1:16,2:18:10.61:253,11,0	0/1:17,5:22:0.06:1,0,0	1/1:26,3:28:5.60:78,6,0	1/1:13,5:18:2.07:194,2,0	1/1:23,5:26:1.93:72,2,0	0/1:15,3:18:0.06:0,0,0	0/0:10,0:10:0.21:0,0,0	1/1:3,0:3:2.05:12,2,0	1/1:2,2:4:5.26:68,5,0	1/1:8,6:12:4.03:219,4,0	0/1:14,3:17:0.08:0,0,0	1/1:14,12:24:5.99:74,6,0	0/1:12,2:14:0.05:1,0,0	0/1:10,2:12:0.03:1,0,0	0/1:16,4:20:0:0,0,0	1/1:14,4:18:2.96:40,3,0	1/1:17,2:19:14.55:239,15,0	1/1:5,2:7:10.75:121,11,0	1/1:3,2:5:10.89:94,11,0
chr10	27921133	.	ATG	A	302.69	PASS	AB=0.990;AC=35;AF=0.625;AN=56;BaseQRankSum=7.610;DP=579;FS=14.160;HRun=0;HaplotypeScore=294.0171;InbreedingCoeff=0.0983;MQ=28.79;MQ0=9;MQRankSum=-1.955;QD=0.66;ReadPosRankSum=4.626;VQSLOD=0.8023;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:25,1:26:1.21:25,1,0	1/1:8,0:8:2.54:6,3,0	0/0:53,1:27:75.26:0,75,1432	0/0:47,0:25:68.01:0,68,1030	0/1:23,0:23:0.25:1,0,0	0/1:12,0:11:0:0,0,0	1/1:27,1:28:1.10:7,1,0	0/1:30,0:19:28.82:29,0,33	0/0:14,0:14:0.04:0,0,0	0/1:20,0:20:46.25:94,0,46	0/1:22,0:22:0.10:0,0,2	1/1:32,0:31:3.11:10,3,0	0/1:22,0:22:21.42:38,0,21	1/1:26,0:25:1.72:26,2,0	1/1:24,0:24:2.22:24,2,0	1/1:14,0:14:0.92:3,1,0	0/1:6,1:7:29.20:43,0,29	0/1:5,0:5:14.31:14,0,46	0/1:13,0:11:3.07:3,0,30	0/1:17,0:17:0.01:0,0,2	1/1:27,3:28:3.05:13,3,0	0/1:18,0:18:0.90:1,0,1	0/1:12,0:12:0.02:0,0,2	0/1:20,0:20:0:0,0,1	1/1:16,2:18:0.56:4,1,0	1/1:22,0:22:3.21:49,3,0	1/1:10,0:10:10.51:36,11,0	0/0:5,0:5:2.71:0,3,6
chr10	27921134	.	TGC	T	951.79	PASS	AB=0.965;AC=29;AF=0.518;AN=56;BaseQRankSum=5.253;DP=580;FS=18.783;HRun=0;HaplotypeScore=292.3393;InbreedingCoeff=0.0348;MQ=29.04;MQ0=8;MQRankSum=0.057;QD=2.36;ReadPosRankSum=0.882;VQSLOD=1.1304;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:26:2.47:11,2,0	1/1:8,0:8:5.84:36,6,0	0/0:52,0:26:75.26:0,75,1479	0/0:44,0:24:61.37:0,61,1073	0/1:23,0:23:0:1,0,0	0/1:12,0:11:0:1,0,0	0/1:25,3:28:3.23:63,0,3	0/0:28,1:19:11.21:0,11,253	0/1:14,0:14:0.25:1,0,0	0/1:17,2:20:3.45:253,0,3	0/1:22,0:22:0.04:1,0,0	0/0:31,1:31:3.13:0,3,20	0/1:22,0:22:25.70:63,0,26	0/1:26,0:25:8.96:40,0,9	1/1:25,0:25:6:95,6,0	1/1:15,0:15:4.31:50,4,0	0/1:8,1:9:27.18:43,0,27	0/1:4,1:5:57.32:57,0,62	0/1:13,0:11:5.87:6,0,74	0/1:17,0:17:0.05:0,0,0	0/1:28,3:29:8.72:18,0,9	0/1:18,0:18:0.03:2,0,0	1/1:10,2:12:2.97:25,3,0	0/1:20,1:21:0:0,0,0	0/0:18,0:18:1.80:0,2,10	1/1:21,1:22:7.04:237,7,0	0/1:10,0:10:5.34:60,0,5	0/1:5,0:5:24.31:24,0,31
chr10	27921136	.	C	CAT	2682.82	PASS	AB=0.726;AC=35;AF=0.625;AN=56;BaseQRankSum=5.614;DP=627;FS=7.541;HRun=0;HaplotypeScore=311.0338;InbreedingCoeff=0.0823;MQ=29.57;MQ0=8;MQRankSum=0.126;QD=5.27;ReadPosRankSum=0.910;VQSLOD=1.7505;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,9:28:2.46:11,2,0	1/1:4,5:9:5.85:83,6,0	0/0:54,0:26:63.12:0,63,861	0/0:46,0:25:63.05:0,63,761	0/1:10,13:23:0:1,0,0	0/1:7,7:13:0:0,0,0	0/1:22,7:29:4.02:64,0,4	0/1:33,1:24:73.83:74,0,264	0/1:11,7:18:0.69:1,0,1	1/1:9,12:22:21.46:732,21,0	0/1:8,14:22:0.05:1,0,0	1/1:11,23:33:5.68:42,6,0	1/1:10,14:24:7.59:257,8,0	1/1:11,17:27:9.89:102,10,0	1/1:7,18:25:5.98:94,6,0	1/1:3,12:15:2.98:46,3,0	0/1:11,1:12:19.53:39,0,20	1/1:5,0:5:2.65:116,3,0	0/1:9,5:12:77.11:131,0,77	0/1:8,13:21:0.19:0,0,1	0/1:30,4:32:0.07:34,0,0	0/1:5,14:19:0.23:1,0,0	1/1:9,6:15:2.79:26,3,0	0/1:13,8:21:0:1,0,0	0/0:10,8:18:1.40:0,1,26	0/1:10,14:24:19.86:637,0,20	0/1:3,8:11:6.99:227,0,7	0/1:6,2:8:64.03:98,0,64
chr10	27921159	.	A	AC	9892.64	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=1.859;DP=622;FS=10.367;HRun=1;HaplotypeScore=209.4259;InbreedingCoeff=0.6591;MQ=45.14;MQ0=3;MQRankSum=1.311;QD=18.49;ReadPosRankSum=4.951;VQSLOD=3.8537;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,21:24:5.75:96,6,0	1/1:0,5:5:6.02:96,6,0	0/0:48,0:28:75.14:0,75,912	0/0:39,0:26:72.15:0,72,890	1/1:0,18:17:14.69:239,15,0	1/1:0,14:14:15.05:240,15,0	1/1:0,17:19:24.07:384,24,0	1/1:0,35:34:87.27:1314,87,0	1/1:0,20:20:18.24:288,18,0	1/1:0,24:24:69.22:1055,69,0	1/1:0,16:17:11.51:191,12,0	1/1:0,38:38:26.26:400,26,0	1/1:0,28:27:47.80:724,48,0	1/1:1,29:29:36.12:554,36,0	1/1:0,29:29:20.71:336,21,0	1/1:0,25:25:39.24:624,39,0	1/1:0,16:19:17.70:254,18,0	1/1:0,2:3:9.03:143,9,0	1/1:0,12:12:33.11:507,33,0	1/1:0,21:21:11.89:192,12,0	1/1:5,38:46:28.64:466,29,0	1/1:0,18:18:5.14:95,5,0	1/1:1,13:13:8.56:143,9,0	1/1:4,16:20:3.01:46,3,0	1/1:0,13:13:6.01:96,6,0	1/1:2,19:21:52.42:797,52,0	1/1:0,14:13:29.69:468,30,0	1/1:0,5:5:9.03:143,9,0
chr10	27921289	.	TACACACAC	T	8031.78	PASS	AB=0.538;AC=46;AF=0.821;AN=56;BaseQRankSum=4.327;DP=784;FS=4.710;HRun=0;HaplotypeScore=279.8934;InbreedingCoeff=0.3895;MQ=41.36;MQ0=15;MQRankSum=0.186;QD=11.92;ReadPosRankSum=3.644;VQSLOD=3.3409;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:22,6:29:9.92:179,10,0	1/1:1,11:12:0.46:2,0,0	0/0:59,0:22:45.19:0,45,1443	0/0:51,0:20:48.16:0,48,1371	0/1:5,22:27:0.11:3,0,0	0/1:2,23:25:0.15:1,0,0	1/1:4,19:23:3.01:70,3,0	1/1:14,41:55:99:2325,117,0	1/1:3,22:25:2.97:21,3,0	1/1:1,30:31:74.58:1516,75,0	1/1:11,13:23:9.13:216,9,0	1/1:6,36:42:3.48:85,3,0	1/1:4,24:28:11.93:302,12,0	1/1:3,27:30:3.01:84,3,0	0/1:2,23:25:0:1,0,0	1/1:2,18:20:6.02:166,6,0	1/1:15,4:20:4.86:92,5,0	0/1:5,10:15:49.49:157,0,49	1/1:9,11:19:33.03:655,33,0	0/1:0,27:27:0:2,0,0	1/1:35,8:43:17.34:294,17,0	1/1:3,19:22:0.47:2,0,0	0/1:3,21:24:0.13:1,0,0	1/1:16,9:25:2.89:44,3,0	1/1:1,20:21:1.67:6,2,0	1/1:14,12:26:63.13:1376,63,0	1/1:0,20:20:11.90:333,12,0	1/1:1,14:15:5.97:101,6,0
chr10	27921296	.	A	ATG	1242.52	PASS	AB=0.959;AC=21;AF=0.375;AN=56;BaseQRankSum=1.844;DP=713;FS=6.719;HRun=0;HaplotypeScore=244.6079;InbreedingCoeff=-0.1157;MQ=40.92;MQ0=12;MQRankSum=-1.789;QD=2.72;ReadPosRankSum=2.000;VQSLOD=1.5381;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:23,5:28:18.42:55,0,18	0/1:11,0:11:0.01:0,0,0	0/0:58,0:22:59.37:0,59,953	0/0:49,0:17:51.17:0,51,808	0/1:22,0:22:0.12:0,0,0	0/1:23,0:23:0:0,0,0	0/0:19,0:19:2.86:0,3,20	0/1:42,0:42:99:590,0,260	1/1:23,0:23:2.68:12,3,0	0/1:30,0:30:99:186,0,217	0/1:20,3:22:15.17:113,0,15	0/0:36,0:36:2.84:0,3,14	0/1:24,0:24:15.24:26,0,15	0/0:27,0:27:2.55:0,3,14	0/1:23,0:23:0:0,0,0	0/0:18,0:18:1.65:0,2,12	0/1:15,5:21:26.03:26,0,66	0/0:13,0:13:8.35:0,8,72	0/1:15,0:14:69.97:70,0,111	0/1:27,0:27:0.02:0,0,0	0/1:28,10:38:16:102,0,16	0/1:20,0:20:0:0,0,0	0/1:21,0:21:0.12:0,0,0	0/0:19,3:22:5.19:0,5,48	1/1:20,0:20:0.44:1,0,0	0/1:25,1:26:99:171,0,231	0/1:20,0:20:13.49:13,0,27	0/0:14,0:14:5.63:0,6,30
chr10	27921663	.	A	ACT	32851.46	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-5.325;DP=726;FS=21.849;HRun=0;HaplotypeScore=91.5855;InbreedingCoeff=0.9997;MQ=73.14;MQ0=0;MQRankSum=-10.034;QD=48.24;ReadPosRankSum=4.740;VQSLOD=3.8583;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,28:33:84.29:1602,84,0	1/1:0,18:19:45.15:868,45,0	0/0:19,0:19:48.16:0,48,726	0/0:26,0:26:63.92:0,64,926	1/1:1,21:22:57.20:1098,57,0	1/1:0,19:19:51.17:985,51,0	1/1:0,24:24:66.23:1274,66,0	1/1:5,28:33:93.32:1793,93,0	1/1:3,23:26:57.20:1101,57,0	1/1:1,41:42:99:2318,120,0	1/1:0,15:15:33.11:635,33,0	1/1:2,26:29:72.25:1391,72,0	1/1:0,23:26:57.09:1101,57,0	1/1:0,25:25:66.23:1275,66,0	1/1:1,29:31:81.28:1564,81,0	1/1:3,26:29:66.12:1275,66,0	1/1:1,20:22:54.19:1043,54,0	1/1:0,12:12:33.11:637,33,0	1/1:4,13:18:48.16:911,48,0	1/1:0,26:26:66.23:1273,66,0	1/1:2,35:37:99:1912,99,0	1/1:0,19:19:42.14:810,42,0	1/1:0,29:29:66.23:1266,66,0	1/1:3,20:24:54.19:1043,54,0	1/1:3,26:29:60.21:1157,60,0	1/1:3,25:28:78.27:1505,78,0	1/1:3,31:37:84.29:1621,84,0	1/1:1,26:27:72.25:1390,72,0
chr10	27921860	.	AACAACT	A	8195.47	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=2.435;DP=626;FS=0.543;HRun=0;HaplotypeScore=103.5148;InbreedingCoeff=0.6844;MQ=51.88;MQ0=29;MQRankSum=-1.056;QD=15.20;ReadPosRankSum=3.514;VQSLOD=3.8908;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:19:0.79:114,1,0	1/1:9,3:11:26.85:273,27,0	0/0:22,0:17:35.22:0,35,380	0/0:18,0:15:44.97:0,45,470	1/1:20,2:21:38.80:430,39,0	1/1:14,4:18:35.63:305,36,0	1/1:3,17:19:4.98:24,5,0	1/1:34,0:26:68.89:610,69,0	1/1:2,26:28:4.90:103,5,0	1/1:33,0:27:68.91:688,69,0	1/1:19,0:17:38.60:447,39,0	1/1:3,26:28:0.05:51,0,0	1/1:3,28:31:0.07:92,0,0	1/1:22,1:21:35.37:538,35,0	1/1:24,3:25:35.58:405,36,0	1/1:4,30:31:5.88:36,6,0	0/0:12,0:12:32.80:0,33,290	0/0:15,0:15:26.80:0,27,211	1/1:13,1:14:29.79:410,30,0	1/1:22,9:30:78.09:1154,78,0	1/1:20,0:18:37.08:403,37,0	1/1:19,0:16:36.01:440,36,0	1/1:24,0:22:44.53:435,45,0	0/0:1,19:20:0.47:0,0,1	1/1:2,21:22:2.94:18,3,0	1/1:28,1:27:48.69:775,49,0	1/1:13,2:12:9.81:262,10,0	1/1:9,1:9:18:184,18,0
chr10	27921915	.	ACTT	A	2561.36	PASS	AB=0.961;AC=30;AF=0.577;AN=52;BaseQRankSum=1.984;DP=729;FS=5.571;HRun=0;HaplotypeScore=172.1106;InbreedingCoeff=0.0258;MQ=32.17;MQ0=106;MQRankSum=-2.008;QD=4.77;ReadPosRankSum=-0.987;VQSLOD=2.4468;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:14:8.65:83,9,0	1/1:7,8:14:4.22:62,4,0	./.	./.	1/1:32,4:32:17.16:176,17,0	0/1:28,0:25:9.81:163,0,10	0/1:28,0:24:29.41:105,0,29	0/0:58,0:35:60.90:0,61,631	1/1:24,1:20:12.02:133,12,0	0/1:49,1:35:99:299,0,376	0/1:25,1:23:4.91:218,0,5	1/1:22,1:22:2.83:83,3,0	0/1:32,1:30:55.20:102,0,55	1/1:18,1:14:10.24:97,10,0	1/1:21,1:18:11.17:126,11,0	0/1:27,0:23:6.91:100,0,7	0/1:9,0:6:11.07:11,0,14	1/1:11,0:6:7.73:43,8,0	0/0:20,0:7:17.62:0,18,179	0/0:44,0:35:13.37:0,13,279	0/0:22,0:13:8.47:0,8,98	0/1:31,1:26:8.67:196,0,9	1/1:26,2:21:4.42:103,4,0	0/0:22,0:17:4.42:0,4,67	0/1:26,3:24:7.67:173,0,8	0/1:28,1:20:99:190,0,154	0/1:26,0:22:45.43:262,0,45	0/1:12,5:13:0.10:0,0,81
chr10	27921957	.	ACTT	A	7035.42	PASS	AB=1.000;AC=47;AF=0.904;AN=52;BaseQRankSum=-6.631;DP=684;FS=12.833;HRun=0;HaplotypeScore=196.0682;InbreedingCoeff=-0.1016;MQ=35.34;MQ0=76;MQRankSum=4.437;QD=10.58;ReadPosRankSum=4.470;VQSLOD=3.5643;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:15:11.77:145,12,0	1/1:20,0:19:28.10:245,28,0	./.	./.	1/1:38,0:34:14.78:229,15,0	1/1:30,1:26:39.41:435,39,0	1/1:26,0:22:23.97:284,24,0	0/1:29,0:11:17.29:17,0,57	1/1:22,0:18:35.41:323,35,0	1/1:48,2:40:33.79:718,34,0	1/1:18,0:17:20.07:298,20,0	1/1:25,0:25:39.55:374,40,0	1/1:37,0:34:46.62:400,47,0	1/1:31,0:27:51.84:406,52,0	1/1:27,0:25:46.85:416,47,0	1/1:25,0:24:43.79:429,44,0	0/1:11,0:8:8.19:17,0,8	1/1:13,0:7:1.74:17,2,0	0/1:22,0:13:8.46:173,0,8	1/1:31,0:23:10.21:134,10,0	0/1:20,0:13:74.57:75,0,75	1/1:24,0:24:8.30:265,8,0	1/1:26,0:20:24.18:223,24,0	0/1:22,0:17:45.51:46,0,58	1/1:21,0:19:30.86:344,31,0	1/1:32,1:27:68.50:535,69,0	1/1:23,0:20:11.12:335,11,0	1/1:19,0:15:17.98:154,18,0
chr10	27921966	.	ACTT	A	4929.38	PASS	AB=1.000;AC=46;AF=0.821;AN=56;BaseQRankSum=-3.815;DP=642;FS=62.606;HRun=0;HaplotypeScore=198.2399;InbreedingCoeff=0.1087;MQ=36.84;MQ0=61;MQRankSum=5.955;QD=8.04;ReadPosRankSum=5.159;VQSLOD=2.2192;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:12:6.53:45,7,0	1/1:17,0:17:29.04:209,29,0	0/0:14,0:7:3.88:0,4,133	0/0:15,0:3:8.96:0,9,104	0/1:35,0:32:47.63:115,0,48	1/1:28,0:23:35.65:239,36,0	1/1:25,0:23:29.95:236,30,0	0/1:31,0:16:62.12:122,0,62	1/1:22,0:18:21.98:235,22,0	0/1:42,0:34:17.27:312,0,17	1/1:16,0:16:16.01:129,16,0	1/1:25,0:25:37.53:258,38,0	1/1:37,0:34:53.76:376,54,0	1/1:30,0:27:51.60:382,52,0	1/1:27,0:27:30.37:278,30,0	1/1:24,0:23:39.84:280,40,0	1/1:7,2:7:3.79:61,4,0	1/1:11,2:7:0.46:139,0,0	0/1:22,0:13:12.46:149,0,12	1/1:25,0:20:18.47:121,18,0	0/1:16,0:10:55.84:59,0,56	1/1:23,0:23:4.69:105,5,0	1/1:29,0:23:5.20:153,5,0	0/1:19,0:16:13:46,0,13	1/1:19,0:19:21.92:233,22,0	1/1:26,0:24:38.17:407,38,0	1/1:22,0:20:6.81:94,7,0	1/1:17,0:14:17.91:144,18,0
chr10	27922046	.	T	TTTTTACA	32863.74	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-2.587;DP=454;FS=23.423;HRun=0;HaplotypeScore=112.0950;InbreedingCoeff=0.8448;MQ=84.82;MQ0=0;MQRankSum=-10.056;QD=79.96;ReadPosRankSum=2.905;VQSLOD=3.0454;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,2:10:6.01:183,6,0	1/1:5,7:12:27.09:970,27,0	0/0:21,0:21:63.08:0,63,1318	0/0:22,0:22:51.15:0,51,1176	1/1:6,20:27:69.22:2362,69,0	1/1:13,13:25:57.19:2117,57,0	1/1:3,4:10:15.05:529,15,0	1/1:9,4:16:36.11:1005,36,0	1/1:6,9:14:24.08:922,24,0	1/1:5,15:21:51.15:1873,51,0	1/1:1,13:15:39.13:1518,39,0	1/1:6,4:12:18.06:689,18,0	1/1:13,14:27:69.24:2467,69,0	1/1:7,9:18:39.13:1389,39,0	1/1:8,10:18:33.11:1178,33,0	1/1:6,17:21:57.20:2068,57,0	1/1:4,4:9:18.06:689,18,0	1/1:4,2:6:15.05:489,15,0	1/1:4,5:11:24.05:702,24,0	1/1:7,18:28:75.25:2849,75,0	1/1:3,6:9:18.06:674,18,0	1/1:2,11:13:36.12:1403,36,0	1/1:8,7:15:42.14:1518,42,0	1/1:9,0:9:24.08:807,24,0	1/1:6,8:15:36.12:1390,36,0	1/1:6,18:26:66.20:2222,66,0	1/1:6,3:10:21.07:735,21,0	1/1:0,1:1:3.01:117,3,0
chr10	27922612	.	C	CACA	3949.06	PASS	AB=0.735;AC=42;AF=0.778;AN=54;BaseQRankSum=1.933;DP=572;FS=5.418;HRun=0;HaplotypeScore=243.5201;InbreedingCoeff=0.1304;MQ=38.63;MQ0=12;MQRankSum=1.273;QD=7.82;ReadPosRankSum=3.328;VQSLOD=2.5821;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:24,9:31:11.32:98,11,0	1/1:4,5:9:8.95:66,9,0	0/0:23,0:4:6.02:0,6,85	0/0:14,0:1:3.01:0,3,49	0/1:17,12:29:7.25:50,0,7	1/1:8,7:15:10.86:68,11,0	0/1:12,10:22:2.92:43,0,3	1/1:32,1:32:34.34:252,34,0	1/1:9,6:16:17.62:195,18,0	1/1:16,16:31:41.55:799,42,0	1/1:10,12:22:0.90:70,1,0	1/1:10,4:13:8.84:68,9,0	1/1:9,5:14:11.16:85,11,0	1/1:12,10:21:15.15:129,15,0	0/1:7,6:13:1.94:68,0,2	1/1:11,5:16:11.70:86,12,0	1/1:19,11:30:10.45:155,10,0	1/1:10,7:17:4.10:330,4,0	0/1:26,4:29:3.70:317,0,4	0/0:9,7:16:2.84:0,3,14	1/1:9,4:11:2.99:24,3,0	1/1:9,11:20:5.96:45,6,0	./.	0/1:15,8:23:14.36:114,0,14	1/1:16,14:30:4.99:156,5,0	0/1:11,8:18:17.71:350,0,18	1/1:8,9:17:2.82:207,3,0	1/1:12,4:16:3.54:174,4,0
chr10	27922617	.	T	TACACACACAC	6372.02	PASS	AB=1.000;AC=48;AF=0.889;AN=54;BaseQRankSum=-1.038;DP=569;FS=2.593;HRun=0;HaplotypeScore=271.0486;InbreedingCoeff=0.3098;MQ=38.83;MQ0=12;MQRankSum=0.447;QD=12.30;ReadPosRankSum=1.008;VQSLOD=3.4648;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:31,0:30:9.13:117,9,0	1/1:10,0:10:6.01:83,6,0	0/0:23,0:4:2.03:0,2,24	./.	1/1:29,1:30:7.20:57,7,0	1/1:14,2:16:6.01:101,6,0	1/1:22,0:22:0.94:2,1,0	1/1:33,0:32:34.54:436,35,0	1/1:14,2:16:11.86:439,12,0	1/1:33,0:32:61.36:1052,61,0	1/1:19,3:23:9.02:149,9,0	1/1:14,0:13:3.48:51,3,0	1/1:13,0:13:9.03:212,9,0	1/1:19,2:21:12.43:279,12,0	1/1:10,2:12:6.02:219,6,0	1/1:15,0:15:3:28,3,0	1/1:28,0:29:12.41:151,12,0	1/1:15,0:16:23.29:365,23,0	1/1:30,0:29:64.33:749,64,0	0/0:13,0:14:0.35:0,0,1	0/1:13,0:11:0:1,0,0	1/1:20,2:22:1.30:4,1,0	1/1:11,4:15:0.89:2,1,0	1/1:19,2:21:10.81:317,11,0	1/1:22,6:29:6.02:288,6,0	1/1:19,0:18:36.09:655,36,0	1/1:14,0:15:15.05:372,15,0	0/1:18,0:18:42.79:242,0,43
chr10	27922648	.	GCA	G	4709.68	PASS	AB=0.858;AC=51;AF=0.944;AN=54;BaseQRankSum=-5.377;DP=506;FS=19.432;HRun=0;HaplotypeScore=186.1161;InbreedingCoeff=-0.0097;MQ=47.39;MQ0=1;MQRankSum=3.534;QD=9.40;ReadPosRankSum=1.683;VQSLOD=3.0750;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:27,5:30:29.57:268,30,0	1/1:9,0:9:8.87:69,9,0	0/1:8,0:4:6:6,0,18	./.	1/1:22,4:26:11.56:161,12,0	1/1:12,3:15:14.94:169,15,0	1/1:7,17:24:9.02:93,9,0	1/1:2,25:27:58.98:577,59,0	1/1:17,4:21:30.86:287,31,0	0/1:7,20:27:88.45:264,0,88	1/1:14,3:17:17.95:195,18,0	1/1:11,2:12:17.53:155,18,0	1/1:16,1:17:29.36:243,29,0	1/1:17,2:19:19.28:176,19,0	1/1:11,2:13:14.50:132,14,0	1/1:13,0:13:17.90:154,18,0	1/1:3,26:29:8.83:95,9,0	1/1:1,12:13:8.92:91,9,0	1/1:17,4:21:10.83:264,11,0	1/1:15,3:18:17.57:181,18,0	1/1:1,21:21:3.01:42,3,0	1/1:18,4:22:17.35:173,17,0	1/1:11,0:11:11.91:104,12,0	1/1:20,6:25:25.23:228,25,0	1/1:18,2:20:16.57:121,17,0	0/1:13,0:12:86.07:86,0,87	1/1:7,0:7:6.15:78,6,0	1/1:13,5:18:3.43:296,3,0
chr10	27924014	.	G	GA	17564.25	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-9.922;DP=686;FS=0.000;HRun=8;HaplotypeScore=59.2651;InbreedingCoeff=0.9979;MQ=83.34;MQ0=0;MQRankSum=-5.131;QD=28.70;ReadPosRankSum=2.884;VQSLOD=5.0799;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,21:28:63.19:727,63,0	1/1:2,13:15:36.11:415,36,0	0/0:22,0:22:45:0,45,407	0/0:21,0:20:38.33:0,38,338	1/1:3,33:36:99:1113,99,0	1/1:5,20:25:54.16:623,54,0	1/1:2,13:15:33.10:381,33,0	1/1:7,28:36:90.10:1018,90,0	1/1:1,12:13:30.09:346,30,0	1/1:4,27:31:84.22:955,84,0	1/1:4,31:35:90.27:1039,90,0	1/1:0,27:27:75.22:865,75,0	1/1:3,25:28:66.20:762,66,0	1/1:2,30:34:92.94:1033,93,0	1/1:6,26:32:60.18:692,60,0	1/1:1,22:23:60.18:692,60,0	0/0:12,0:13:35.05:0,35,308	0/0:18,0:18:24.06:0,24,311	1/1:2,20:22:60.18:692,60,0	1/1:5,30:35:90.17:998,90,0	1/1:3,19:22:51.15:589,51,0	1/1:2,18:20:48.06:524,48,0	1/1:1,12:13:33.10:381,33,0	1/1:1,25:26:69.20:796,69,0	1/1:2,40:43:99:1157,102,0	1/1:0,25:25:75.22:865,75,0	1/1:1,19:20:57.17:658,57,0	1/1:1,7:8:21.06:242,21,0
chr10	27924544	.	CATATAT	C	8352.86	PASS	AB=0.750;AC=42;AF=0.808;AN=52;BaseQRankSum=-4.541;DP=275;FS=12.347;HRun=0;HaplotypeScore=64.1916;InbreedingCoeff=0.5169;MQ=58.78;MQ0=4;MQRankSum=-3.090;QD=36.64;ReadPosRankSum=0.155;VQSLOD=3.4016;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:2,1:3:3.19:112,0,3	1/1:3,1:4:12.04:232,12,0	0/0:13,0:6:0.47:0,0,1	0/0:10,0:3:3.01:0,3,57	1/1:11,12:23:38.02:877,38,0	1/1:3,8:11:30.09:612,30,0	1/1:2,3:5:3.01:65,3,0	1/1:8,22:30:34.68:949,35,0	1/1:2,4:6:9.03:196,9,0	1/1:6,7:14:30.10:582,30,0	1/1:8,8:16:33.09:637,33,0	1/1:4,3:7:12.04:224,12,0	1/1:3,6:9:26.96:458,27,0	1/1:6,5:11:27.08:456,27,0	1/1:4,1:5:6.01:90,6,0	1/1:4,2:6:6.02:131,6,0	0/0:3,0:11:30.10:0,30,787	0/0:4,0:7:12.04:0,12,340	0/1:8,4:11:23.68:319,0,24	1/1:2,10:12:18.06:335,18,0	./.	1/1:0,1:1:3.01:65,3,0	1/1:4,3:7:12.03:221,12,0	./.	1/1:3,4:7:12.04:262,12,0	1/1:7,5:12:27.09:516,27,0	1/1:4,7:11:24.08:507,24,0	1/1:13,3:16:25.85:506,26,0
chr10	27924639	.	TA	T	8670.90	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=3.520;DP=343;FS=19.342;HRun=6;HaplotypeScore=38.5448;InbreedingCoeff=0.9235;MQ=71.64;MQ0=0;MQRankSum=-1.455;QD=28.34;ReadPosRankSum=3.383;VQSLOD=2.9822;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,17:17:48.12:515,48,0	1/1:2,6:8:18.04:193,18,0	0/0:11,0:11:24.07:0,24,302	0/0:4,0:4:9.03:0,9,118	1/1:1,14:15:42.10:449,42,0	1/1:1,20:21:57.14:613,57,0	1/1:0,8:8:24.06:258,24,0	1/1:5,21:26:63.10:651,63,0	1/1:0,12:12:36.09:387,36,0	1/1:2,15:17:45.11:478,45,0	1/1:1,14:15:42.11:451,42,0	1/1:3,11:14:33.08:355,33,0	1/1:0,12:12:36.09:387,36,0	1/1:0,9:9:24.06:258,24,0	1/1:1,8:9:21.05:226,21,0	1/1:1,16:17:39.10:419,39,0	0/0:7,0:7:21.04:0,21,258	0/0:15,0:15:45.12:0,45,572	1/1:0,8:8:24.06:258,24,0	1/1:0,11:11:33.08:355,33,0	1/1:0,6:6:15.04:161,15,0	1/1:1,1:2:3.01:32,3,0	1/1:0,13:13:30.08:322,30,0	1/1:0,7:7:18.05:193,18,0	1/1:0,15:15:36.09:387,36,0	1/1:1,14:15:42.11:451,42,0	1/1:1,16:17:48.12:516,48,0	1/1:0,12:12:33.08:355,33,0
chr10	27926080	.	ATGAATTTGGACAAGT	A	40341.79	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=11.980;DP=500;FS=18.105;HRun=0;HaplotypeScore=312.9070;InbreedingCoeff=0.9551;MQ=74.00;MQ0=0;MQRankSum=-11.023;QD=93.38;ReadPosRankSum=5.139;VQSLOD=3.5538;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,14:15:24.08:1069,24,0	1/1:0,5:5:15.05:667,15,0	0/0:15,0:15:36.58:0,37,1648	0/0:21,0:21:54.19:0,54,2827	1/1:0,36:36:90.31:3856,90,0	1/1:1,30:31:66.23:2941,66,0	1/1:1,8:9:21.07:903,21,0	1/1:2,19:21:53.91:1400,54,0	1/1:3,12:15:21.07:936,21,0	1/1:0,30:30:81.23:3353,81,0	1/1:7,18:25:67.98:2568,68,0	1/1:0,13:13:27.09:1199,27,0	1/1:2,15:17:39.13:1736,39,0	1/1:1,21:22:48.16:2136,48,0	1/1:0,15:15:36.12:1604,36,0	1/1:3,20:23:41.66:1871,42,0	0/0:12,0:12:33.11:0,33,2255	0/0:20,0:20:54.16:0,54,3273	1/1:5,9:14:26.97:597,27,0	1/1:0,30:30:63.22:2807,63,0	1/1:0,7:7:9.03:401,9,0	1/1:0,9:9:15.05:668,15,0	1/1:0,12:12:27.09:1147,27,0	1/1:0,7:7:12.04:479,12,0	1/1:0,18:18:27.09:1203,27,0	1/1:0,27:27:81.27:3326,81,0	1/1:3,23:26:66.23:2940,66,0	1/1:0,5:5:12.04:535,12,0
chr10	27926916	.	A	ATAT	13280.15	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=10.068;DP=466;FS=9.195;HRun=0;HaplotypeScore=203.7261;InbreedingCoeff=0.9427;MQ=63.98;MQ0=1;MQRankSum=-9.467;QD=32.39;ReadPosRankSum=3.904;VQSLOD=4.6044;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,0:3:9.03:125,9,0	1/1:9,0:9:21.07:293,21,0	0/0:14,0:14:33:0,33,403	0/0:9,0:7:15.05:0,15,241	1/1:20,0:20:54.18:743,54,0	1/1:24,0:24:63.21:877,63,0	1/1:9,0:9:21.07:292,21,0	1/1:28,0:28:51.17:712,51,0	1/1:18,0:18:48.13:649,48,0	1/1:14,1:15:45.15:673,45,0	1/1:22,1:23:60.18:846,60,0	1/1:12,0:12:27.09:376,27,0	1/1:22,0:22:48.13:667,48,0	1/1:10,0:10:24.08:357,24,0	1/1:21,1:22:51.17:734,51,0	1/1:20,0:20:57.07:775,57,0	0/0:15,0:15:42.04:0,42,558	0/0:18,0:18:54.18:0,54,861	1/1:15,0:15:33.11:487,33,0	1/1:34,0:34:78.05:1033,78,0	1/1:5,0:5:9.03:128,9,0	1/1:17,0:17:24.08:334,24,0	1/1:30,0:30:63.21:900,63,0	1/1:7,0:7:9.02:113,9,0	1/1:12,0:12:30.10:418,30,0	1/1:18,0:18:48.16:668,48,0	1/1:27,1:29:60.18:830,60,0	1/1:8,0:8:18.06:251,18,0
chr10	27926920	.	T	TATTACA	43183.71	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=7.701;DP=516;FS=12.081;HRun=0;HaplotypeScore=179.6206;InbreedingCoeff=0.9812;MQ=57.91;MQ0=1;MQRankSum=-9.156;QD=94.29;ReadPosRankSum=3.025;VQSLOD=5.7285;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,3:6:15.05:396,15,0	1/1:1,7:8:24.08:833,24,0	0/0:11,0:12:36.07:0,36,693	0/0:10,0:8:23.81:0,24,449	1/1:6,18:24:66.22:2242,66,0	1/1:3,21:24:69.24:2499,69,0	1/1:6,7:13:33.11:1155,33,0	1/1:13,17:30:90.27:2710,90,0	1/1:5,15:20:60.21:2046,60,0	1/1:4,12:17:51.17:1693,51,0	1/1:10,17:27:75.24:2339,75,0	1/1:5,9:14:39.13:1357,39,0	1/1:8,16:24:72.25:2336,72,0	1/1:4,7:11:33.06:984,33,0	1/1:6,16:22:66.19:2253,66,0	1/1:7,16:23:69.22:2216,69,0	0/0:16,0:16:45.11:0,45,978	0/0:20,0:20:57.18:0,57,1353	1/1:7,10:17:48.16:1624,48,0	1/1:12,24:36:99:3287,103,0	1/1:2,3:5:12.04:438,12,0	1/1:11,8:19:54.17:1657,54,0	1/1:10,21:31:90.26:2936,90,0	1/1:3,4:7:15.05:451,15,0	1/1:6,10:16:48.16:1611,48,0	1/1:8,16:24:72.25:2474,72,0	1/1:12,18:30:84.27:2744,84,0	1/1:4,6:10:27.08:902,27,0
chr10	27926933	.	T	TC	15115.77	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=8.052;DP=479;FS=30.197;HRun=1;HaplotypeScore=193.5557;InbreedingCoeff=0.9730;MQ=54.83;MQ0=0;MQRankSum=-7.527;QD=35.23;ReadPosRankSum=2.236;VQSLOD=1.4629;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,9:9:23.84:263,24,0	1/1:1,7:8:24.08:337,24,0	0/0:7,0:6:14.94:0,15,171	0/0:8,0:7:20.48:0,20,192	1/1:3,21:24:59.82:713,60,0	1/1:0,24:24:69.23:967,69,0	1/1:0,17:17:39.13:539,39,0	1/1:5,25:30:84.16:1084,84,0	1/1:1,16:17:45.15:629,45,0	1/1:4,15:19:51.10:640,51,0	1/1:2,25:27:75.04:976,75,0	1/1:1,11:12:30.05:394,30,0	1/1:0,24:24:66.22:913,66,0	1/1:0,11:11:27.09:376,27,0	1/1:4,15:19:45.11:606,45,0	1/1:1,18:19:51.17:712,51,0	0/0:18,0:18:51.08:0,51,607	0/0:17,0:17:41.02:0,41,560	1/1:0,12:12:36.12:507,36,0	1/1:1,35:36:93.80:1328,94,0	1/1:2,3:5:11.92:105,12,0	1/1:1,13:14:39.04:520,39,0	1/1:2,24:26:63.12:858,63,0	1/1:2,4:6:11.69:113,12,0	1/1:1,14:15:39.06:514,39,0	1/1:1,21:22:63.20:868,63,0	1/1:1,24:25:66.11:880,66,0	1/1:2,6:8:19.32:276,19,0
chr10	27928019	.	CA	C	15682.84	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=6.652;DP=592;FS=0.000;HRun=6;HaplotypeScore=131.6088;InbreedingCoeff=0.9867;MQ=74.99;MQ0=0;MQRankSum=-6.477;QD=28.88;ReadPosRankSum=3.104;VQSLOD=3.1999;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,26:30:78.20:838,78,0	1/1:0,7:6:15.04:161,15,0	0/0:14,0:14:39.12:0,39,488	0/0:17,0:17:42.13:0,42,514	1/1:0,28:27:75.19:805,75,0	1/1:1,28:29:84.21:903,84,0	1/1:2,14:16:42.10:451,42,0	1/1:7,26:33:78.15:826,78,0	1/1:1,22:23:63.16:677,63,0	1/1:1,33:34:96.24:1032,96,0	1/1:0,13:13:39.10:419,39,0	1/1:1,13:14:33.08:354,33,0	1/1:1,22:23:66.17:709,66,0	1/1:0,25:25:75.19:805,75,0	1/1:0,28:28:81.20:870,81,0	1/1:1,26:27:72.18:774,72,0	0/0:14,0:14:36.12:0,36,474	0/0:4,0:4:12.04:0,12,158	1/1:2,24:26:72.15:753,72,0	1/1:1,12:13:36.09:387,36,0	1/1:0,23:23:60.15:645,60,0	1/1:2,19:21:54.13:580,54,0	1/1:0,11:11:33.08:354,33,0	1/1:1,19:20:57.14:612,57,0	1/1:0,31:31:81.20:870,81,0	1/1:1,19:20:57.10:600,57,0	1/1:5,26:31:72.18:774,72,0	1/1:1,16:17:45.11:484,45,0
chr10	27928342	.	CCCAGAGATCCTG	C	36040.08	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=11.977;DP=570;FS=1.013;HRun=0;HaplotypeScore=208.0102;InbreedingCoeff=0.9899;MQ=79.25;MQ0=0;MQRankSum=-11.825;QD=72.22;ReadPosRankSum=6.041;VQSLOD=4.4409;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,16:17:36.08:1291,36,0	1/1:0,7:6:18.06:694,18,0	0/0:22,0:22:66.23:0,66,3544	0/0:20,0:20:60.18:0,60,2819	1/1:3,30:32:57.01:1542,57,0	1/1:0,27:27:45.15:1735,45,0	1/1:1,17:18:33.11:1265,33,0	1/1:4,27:31:81.15:2139,81,0	1/1:1,11:12:21.07:809,21,0	1/1:5,25:30:78.01:2449,78,0	1/1:2,22:24:51.09:1843,51,0	1/1:0,15:15:27.09:1040,27,0	1/1:1,24:25:51.17:1964,51,0	1/1:2,22:24:51.17:1963,51,0	1/1:3,27:30:66.23:2543,66,0	1/1:5,13:18:30.10:1156,30,0	0/0:21,0:21:57.18:0,57,3090	0/0:8,0:8:24.04:0,24,1066	1/1:0,12:12:31.29:902,31,0	1/1:1,19:20:45.10:1602,45,0	1/1:1,13:14:21.07:809,21,0	1/1:2,20:22:42.14:1617,42,0	1/1:0,19:19:33.41:1271,33,0	1/1:1,10:11:18.06:693,18,0	1/1:2,15:17:33.11:1272,33,0	1/1:5,28:33:78.19:2669,78,0	1/1:3,25:28:54.66:2077,55,0	1/1:2,10:12:18.53:695,19,0
chr10	27929746	.	CT	C	11475.10	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=2.491;DP=584;FS=9.065;HRun=9;HaplotypeScore=94.6320;InbreedingCoeff=0.9782;MQ=74.74;MQ0=0;MQRankSum=-2.300;QD=21.77;ReadPosRankSum=1.987;VQSLOD=5.0974;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,16:16:45.02:412,45,0	1/1:2,13:15:36.02:329,36,0	0/0:15,0:15:20.88:0,21,198	0/0:15,0:12:20.51:0,21,192	1/1:3,28:32:80.07:720,80,0	1/1:4,20:24:57.03:522,57,0	1/1:1,13:14:36.02:330,36,0	1/1:9,26:35:75.01:681,75,0	1/1:2,11:13:33.02:302,33,0	1/1:3,22:25:66.03:604,66,0	1/1:4,21:25:57.01:522,57,0	1/1:1,20:21:54.03:494,54,0	1/1:4,21:25:45.01:412,45,0	1/1:0,15:15:42.02:384,42,0	1/1:0,18:18:48.03:439,48,0	1/1:3,21:24:54.03:494,54,0	0/0:13,0:13:36.11:0,36,415	0/0:12,1:13:8.65:0,9,352	1/1:2,15:17:44.99:404,45,0	1/1:2,26:29:80.07:720,80,0	1/1:1,9:10:21.01:192,21,0	1/1:1,17:18:48.02:439,48,0	1/1:3,21:24:50.92:466,51,0	1/1:3,31:34:68.59:631,69,0	1/1:5,27:32:69.03:632,69,0	1/1:4,22:26:66.03:604,66,0	1/1:5,19:24:51:467,51,0	1/1:1,10:11:30.01:275,30,0
chr10	27930514	.	T	TTC	22284.97	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-11.420;DP=628;FS=5.976;HRun=0;HaplotypeScore=67.4174;InbreedingCoeff=0.9991;MQ=85.95;MQ0=0;MQRankSum=-4.612;QD=41.81;ReadPosRankSum=3.280;VQSLOD=6.8188;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,37:41:99:1800,105,0	1/1:4,12:16:33.11:566,33,0	0/0:32,0:32:56.16:0,56,678	0/0:22,0:20:37.59:0,38,540	1/1:4,14:18:42.14:702,42,0	1/1:1,19:20:54.18:925,54,0	1/1:0,19:19:54.18:926,54,0	1/1:9,26:36:81.25:1330,81,0	1/1:4,17:21:48.16:823,48,0	1/1:3,22:25:66.23:1125,66,0	1/1:0,10:11:30.10:514,30,0	1/1:2,27:29:72.25:1234,72,0	1/1:3,21:24:60.21:1027,60,0	1/1:5,22:27:60.21:1028,60,0	1/1:1,25:26:63.22:1080,63,0	1/1:4,28:32:78.27:1337,78,0	0/0:27,0:27:75.23:0,75,972	0/0:14,0:14:39.13:0,39,511	1/1:3,15:18:44.98:721,45,0	1/1:1,22:24:63.21:1066,63,0	1/1:1,20:21:54.18:926,54,0	1/1:1,14:17:36.12:615,36,0	1/1:0,10:10:27.09:462,27,0	1/1:1,17:18:48.16:823,48,0	1/1:0,17:17:42.14:720,42,0	1/1:2,15:17:45.14:736,45,0	1/1:7,28:35:78.27:1337,78,0	1/1:2,9:11:27.09:463,27,0
chr10	27931970	.	TAA	T	14306.37	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=5.848;DP=628;FS=1.673;HRun=11;HaplotypeScore=144.5400;InbreedingCoeff=0.9436;MQ=69.11;MQ0=3;MQRankSum=-5.987;QD=27.46;ReadPosRankSum=-0.061;VQSLOD=3.5389;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,23:27:72.12:754,72,0	1/1:4,7:11:27.06:287,27,0	0/0:30,0:18:7.61:0,8,143	0/0:26,0:17:14.38:0,14,178	1/1:5,29:34:90.20:950,90,0	1/1:1,15:16:45.10:479,45,0	1/1:4,15:19:54.11:563,54,0	1/1:13,25:39:92.92:957,93,0	1/1:3,17:20:54.13:575,54,0	1/1:8,20:28:69.12:716,69,0	1/1:9,15:24:51.11:541,51,0	1/1:7,16:23:63.14:662,63,0	1/1:8,22:30:72.08:766,72,0	1/1:4,10:14:36.09:383,36,0	1/1:2,14:16:42.10:447,42,0	1/1:1,23:24:72.18:766,72,0	0/0:31,0:31:87.30:0,87,1331	0/0:17,0:19:44.63:0,45,638	1/1:1,14:15:45.11:479,45,0	1/1:10,16:26:63.14:670,63,0	1/1:1,1:2:6.02:64,6,0	1/1:4,16:20:51.08:527,51,0	1/1:2,16:18:51.10:534,51,0	1/1:8,8:16:36.08:382,36,0	1/1:9,29:38:79.11:1049,79,0	1/1:3,21:24:63.15:670,63,0	1/1:6,22:28:75.16:797,75,0	1/1:1,8:9:27.07:287,27,0
chr10	27932006	.	G	GAA	23403.28	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-1.888;DP=681;FS=3.354;HRun=5;HaplotypeScore=121.0624;InbreedingCoeff=0.9902;MQ=80.08;MQ0=2;MQRankSum=-10.739;QD=41.79;ReadPosRankSum=3.032;VQSLOD=3.4415;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,27:30:72.20:1200,72,0	1/1:4,5:10:12.04:208,12,0	0/0:32,0:30:45.52:0,46,734	0/0:35,0:26:37.33:0,37,599	1/1:2,26:28:69.06:1039,69,0	1/1:1,22:23:63.17:1060,63,0	1/1:2,24:26:60.21:1035,60,0	1/1:9,32:42:99:1681,99,0	1/1:3,18:22:57.18:959,57,0	1/1:3,28:31:81.28:1373,81,0	1/1:1,18:19:45.12:736,45,0	1/1:2,18:20:45.15:778,45,0	1/1:1,29:30:81.28:1400,81,0	1/1:0,16:17:42.14:727,42,0	1/1:1,22:23:51.17:883,51,0	1/1:4,18:22:54.18:910,54,0	0/0:30,0:30:81.23:0,81,1015	0/0:21,0:21:57.17:0,57,712	1/1:2,21:23:63.22:1087,63,0	1/1:3,24:27:75.24:1257,75,0	1/1:1,8:9:21.07:364,21,0	1/1:2,18:21:51.12:812,51,0	1/1:6,15:21:51.17:858,51,0	1/1:4,14:18:39.09:643,39,0	1/1:3,31:34:90.31:1546,90,0	1/1:6,17:23:54.18:902,54,0	1/1:1,28:29:81.23:1370,81,0	1/1:1,11:12:33.11:571,33,0
chr10	27932011	.	A	AAC	13192.90	PASS	AB=1.000;AC=46;AF=0.821;AN=56;BaseQRankSum=9.445;DP=645;FS=7.547;HRun=0;HaplotypeScore=141.5417;InbreedingCoeff=0.7782;MQ=77.70;MQ0=2;MQRankSum=-12.151;QD=24.71;ReadPosRankSum=4.901;VQSLOD=5.5544;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:29:72.06:713,72,0	0/1:7,0:7:29.52:90,0,30	0/0:29,0:25:51.93:0,52,902	0/0:28,0:21:55.71:0,56,760	1/1:27,0:27:65.89:630,66,0	1/1:22,0:22:63.05:613,63,0	1/1:25,0:25:60.09:604,60,0	1/1:38,0:38:30.14:805,30,0	1/1:21,0:21:57.07:552,57,0	1/1:29,0:29:80.89:731,81,0	1/1:21,0:21:18.03:371,18,0	1/1:19,0:19:45.08:480,45,0	1/1:29,0:29:81.13:818,81,0	1/1:18,0:18:19.42:392,19,0	1/1:22,0:22:51.07:506,51,0	1/1:19,0:19:54.06:532,54,0	0/0:33,0:33:93.23:0,93,1339	0/0:21,0:21:57.18:0,57,868	1/1:21,0:21:38.28:521,38,0	1/1:27,1:28:74.95:695,75,0	0/1:9,0:9:2.57:151,0,3	1/1:20,1:21:48.03:480,48,0	1/1:17,3:20:8.64:506,9,0	1/1:15,0:15:38.98:346,39,0	1/1:32,1:33:90.14:936,90,0	1/1:20,2:22:32.35:571,32,0	1/1:28,0:28:81.11:821,81,0	1/1:11,0:11:33.06:329,33,0
chr10	27935090	.	AACAC	A	1127.53	PASS	AB=1.000;AC=24;AF=0.444;AN=54;BaseQRankSum=0.675;DP=460;FS=30.308;HRun=0;HaplotypeScore=92.4333;InbreedingCoeff=0.2462;MQ=70.48;MQ0=19;MQRankSum=2.530;QD=4.25;ReadPosRankSum=2.416;VQSLOD=0.1883;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:29:0.67:122,0,1	0/0:7,0:6:3.01:0,3,48	0/0:30,0:17:5.06:0,5,80	0/0:30,0:15:0:0,0,0	1/1:17,0:17:6.27:96,6,0	1/1:20,0:20:5.50:50,5,0	0/1:24,0:24:2.49:158,0,2	0/1:28,0:28:6.27:6,0,34	1/1:12,0:12:2.70:78,3,0	0/0:12,0:12:3.89:0,4,85	0/1:15,0:14:28.54:120,0,29	0/1:16,0:16:16.12:127,0,16	0/0:11,0:11:9.03:0,9,116	0/0:13,0:12:11.40:0,11,163	1/1:16,0:16:5.39:51,5,0	1/1:12,0:11:1.13:2,1,0	0/0:13,0:11:6.84:0,7,67	0/0:11,0:9:9.03:0,9,136	0/1:15,0:13:7.38:40,0,7	./.	1/1:16,0:15:8.39:70,8,0	0/1:14,0:14:13.17:13,0,18	0/0:15,0:15:15.05:0,15,233	0/0:22,0:22:17.55:0,18,234	1/1:8,0:8:15.05:187,15,0	0/0:19,0:19:22.41:0,22,306	1/1:12,0:10:6.02:85,6,0	0/1:10,0:9:81.56:82,0,118
chr10	27935549	.	T	TA	15503.65	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-9.955;DP=613;FS=2.385;HRun=8;HaplotypeScore=55.5756;InbreedingCoeff=0.9966;MQ=80.95;MQ0=0;MQRankSum=-5.253;QD=28.71;ReadPosRankSum=3.640;VQSLOD=5.0913;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,19:19:54.16:621,54,0	1/1:0,6:6:18.05:208,18,0	0/0:21,0:21:43.23:0,43,371	0/0:17,0:17:28.10:0,28,230	1/1:4,20:24:29.62:577,30,0	1/1:0,35:35:93.28:1073,93,0	1/1:1,23:24:66.20:762,66,0	1/1:5,26:31:78.22:888,78,0	1/1:3,21:24:37.11:635,37,0	1/1:3,19:22:57.17:658,57,0	1/1:0,18:18:51.07:558,51,0	1/1:0,22:22:57.17:658,57,0	1/1:1,19:20:54:623,54,0	1/1:4,21:25:63.18:719,63,0	1/1:3,28:31:78.23:900,78,0	1/1:1,24:25:57.17:658,57,0	0/0:27,0:27:66.02:0,66,604	0/0:8,0:8:24.01:0,24,220	1/1:3,14:17:42.11:473,42,0	1/1:0,28:27:78.07:854,78,0	1/1:3,14:17:33.10:381,33,0	1/1:3,12:16:38.91:415,39,0	1/1:0,19:19:45.11:519,45,0	1/1:6,13:19:36.11:415,36,0	1/1:1,27:28:72.21:831,72,0	1/1:3,26:29:78.07:867,78,0	1/1:4,24:28:66.20:762,66,0	1/1:0,13:13:39.12:450,39,0
chr10	27935929	.	AG	A	1038.28	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=3.351;DP=674;FS=1.357;HRun=6;HaplotypeScore=76.4440;InbreedingCoeff=0.9994;MQ=88.90;MQ0=0;MQRankSum=-1.173;QD=27.32;ReadPosRankSum=1.548;VQSLOD=4.2504;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,120,1543	0/0:10,0:10:27.09:0,27,355	0/0:25,0:25:63.17:0,63,766	0/0:25,0:25:64.22:0,64,777	0/0:29,0:29:84.20:0,84,1041	0/0:32,0:32:90.28:0,90,1169	0/0:30,0:30:81.26:0,81,1066	0/0:24,0:24:63.20:0,63,814	0/0:22,0:22:66.21:0,66,868	0/0:22,0:22:52.04:0,52,651	0/0:27,0:27:75.20:0,75,933	0/0:27,0:27:81.25:0,81,1040	0/0:20,0:20:54.17:0,54,696	0/0:16,0:16:45.15:0,45,591	0/0:22,0:22:63.20:0,63,829	0/0:24,0:24:72.22:0,72,932	1/1:0,19:19:54.14:580,54,0	1/1:0,19:19:54.14:580,54,0	0/0:20,0:20:57.19:0,57,749	0/0:34,0:34:90.29:0,90,1179	0/0:19,0:19:57.16:0,57,719	0/0:23,0:23:63.20:0,63,828	0/0:20,0:20:57.17:0,57,735	0/0:21,0:21:60.20:0,60,789	0/0:30,0:30:84.26:0,84,1091	0/0:29,0:29:81.25:0,81,1040	0/0:29,0:29:81.26:0,81,1065	0/0:12,0:12:36.12:0,36,474
chr10	27936817	.	A	AT	16899.27	PASS	AB=0.550;AC=47;AF=0.839;AN=56;BaseQRankSum=4.933;DP=667;FS=8.327;HRun=8;HaplotypeScore=113.0518;InbreedingCoeff=0.9229;MQ=74.48;MQ0=0;MQRankSum=-2.234;QD=27.75;ReadPosRankSum=3.628;VQSLOD=3.8921;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,27:31:78.23:895,78,0	1/1:0,15:15:36.11:416,36,0	0/0:11,0:11:27.01:0,27,244	0/0:12,0:12:21.01:0,21,192	1/1:8,30:38:65.78:997,66,0	1/1:9,30:39:90.27:1036,90,0	1/1:6,8:14:18.05:208,18,0	1/1:6,28:34:84.25:966,84,0	1/1:1,25:26:66.20:762,66,0	1/1:8,20:28:69.04:775,69,0	1/1:1,25:26:72.17:814,72,0	1/1:2,18:20:51.15:589,51,0	1/1:1,26:28:72.21:830,72,0	1/1:4,33:37:81.24:930,81,0	1/1:2,26:28:72.21:831,72,0	1/1:3,23:27:66.03:742,66,0	0/0:20,0:20:57.02:0,57,521	0/0:15,0:15:45:0,45,406	1/1:1,9:9:27.08:312,27,0	1/1:5,28:33:78.20:886,78,0	1/1:2,17:19:23.68:527,24,0	1/1:2,18:20:48.14:552,48,0	1/1:5,16:21:42.12:485,42,0	0/1:2,9:11:0.39:250,0,0	1/1:6,22:28:63.15:712,63,0	1/1:2,22:24:63.19:727,63,0	1/1:2,37:40:99:1382,120,0	1/1:0,11:11:24.07:277,24,0
chr10	27937598	.	CACACACATACACACAT	C	3658.84	PASS	AB=0.985;AC=19;AF=0.339;AN=56;BaseQRankSum=8.967;DP=543;FS=32.204;HRun=0;HaplotypeScore=222.5147;InbreedingCoeff=-0.4371;MQ=69.84;MQ0=11;MQRankSum=-4.264;QD=11.05;ReadPosRankSum=5.619;VQSLOD=1.1498;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:20,0:20:48.67:49,0,53	0/1:11,0:10:60.95:83,0,61	0/0:45,0:26:32.01:0,32,971	0/0:40,0:26:65.71:0,66,1096	0/0:13,2:15:5.99:0,6,49	0/1:19,0:19:17.43:57,0,17	0/1:31,0:31:57.96:124,0,58	0/0:20,0:19:14.80:0,15,152	0/1:12,0:12:26.92:537,0,27	0/1:23,0:23:99:160,0,120	1/1:13,0:13:3.01:52,3,0	0/1:22,0:22:40.28:104,0,40	0/1:23,0:23:65.26:514,0,65	0/1:18,1:19:57.95:99,0,58	0/1:20,0:19:27.98:28,0,60	0/1:25,0:25:73.06:206,0,73	0/0:16,0:16:27.96:0,28,936	0/0:10,0:10:24.03:0,24,695	0/1:15,0:15:17.65:272,0,18	0/0:17,0:17:8.98:0,9,73	0/0:17,0:16:0.81:0,1,42	0/1:16,0:16:5.49:5,0,37	0/1:13,0:13:59.13:59,0,61	0/0:20,0:20:2.99:0,3,24	0/0:12,0:11:6.14:0,6,30	0/1:30,0:29:81.75:1056,0,82	0/1:15,0:15:55.54:231,0,56	0/1:3,1:4:20.58:21,0,40
chr10	27937606	.	TACACACATACACACAC	T	6575.85	PASS	AC=42;AF=0.840;AN=50;BaseQRankSum=4.404;DP=490;FS=8.664;HRun=0;HaplotypeScore=183.6197;InbreedingCoeff=0.6780;MQ=60.65;MQ0=18;MQRankSum=-0.578;QD=19.23;ReadPosRankSum=3.532;VQSLOD=2.8377;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:17:14.91:158,15,0	1/1:4,6:10:3.01:114,3,0	0/0:39,0:20:35.20:0,35,482	0/0:35,0:22:30.43:0,30,473	./.	1/1:11,4:18:20.99:224,21,0	1/1:4,25:27:3.01:132,3,0	1/1:14,0:12:20.99:180,21,0	1/1:3,6:11:15.05:648,15,0	1/1:5,15:20:38.72:470,39,0	1/1:0,12:12:3.01:69,3,0	1/1:4,17:22:2.53:130,3,0	1/1:16,5:21:48.01:902,48,0	1/1:5,13:19:3.01:128,3,0	1/1:10,7:15:9.01:109,9,0	1/1:15,7:22:23.98:426,24,0	0/0:19,0:18:27.29:0,27,829	0/0:10,0:10:20.99:0,21,658	1/1:1,12:13:35.79:536,36,0	./.	1/1:6,12:15:2.99:24,3,0	1/1:10,5:15:14.48:123,14,0	1/1:7,2:9:6:120,6,0	./.	1/1:10,1:10:14.98:124,15,0	1/1:18,8:25:58.47:1523,58,0	1/1:9,3:12:20.91:395,21,0	1/1:3,0:3:5.95:43,6,0
chr10	27937612	.	CAT	C	2454.20	PASS	AC=42;AF=0.840;AN=50;BaseQRankSum=5.744;DP=445;FS=2.489;HRun=0;HaplotypeScore=117.0941;InbreedingCoeff=0.6375;MQ=54.18;MQ0=21;MQRankSum=-1.813;QD=7.89;ReadPosRankSum=2.849;VQSLOD=3.5818;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:17:17.89:137,18,0	1/1:8,0:7:2.97:20,3,0	0/0:32,0:14:35.25:0,35,360	0/0:32,0:19:15.55:0,16,336	./.	1/1:17,0:17:20.69:151,21,0	1/1:30,0:27:2.53:18,3,0	1/1:5,7:10:17.49:174,17,0	1/1:10,0:10:14.63:91,15,0	1/1:17,0:17:29.51:212,30,0	1/1:12,0:12:2.92:17,3,0	1/1:22,0:21:2.95:19,3,0	1/1:18,0:18:47.66:365,48,0	1/1:17,0:17:2.90:16,3,0	1/1:14,0:12:8.93:66,9,0	1/1:20,0:20:23.91:192,24,0	0/0:19,0:18:10.84:0,11,194	0/0:10,0:10:4.66:0,5,127	1/1:12,0:12:26.76:191,27,0	./.	1/1:19,0:15:2.37:8,2,0	1/1:13,0:13:14.98:124,15,0	1/1:7,0:6:5.99:48,6,0	./.	1/1:10,0:9:17.92:142,18,0	1/1:23,0:22:56.61:424,57,0	1/1:9,0:9:20.77:145,21,0	1/1:3,0:3:5.95:43,6,0
chr10	27937650	.	CAGAGAGAGAG	C	2536.82	PASS	AB=0.924;AC=34;AF=0.773;AN=44;BaseQRankSum=3.309;DP=507;FS=51.685;HRun=0;HaplotypeScore=202.4969;InbreedingCoeff=0.1804;MQ=33.51;MQ0=19;MQRankSum=-0.447;QD=6.76;ReadPosRankSum=3.515;VQSLOD=1.2828;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	1/1:15,1:16:0.47:1,0,0	1/1:17,0:24:1.13:74,1,0	1/1:28,2:26:2.98:82,3,0	0/0:22,0:21:3.93:0,4,11	1/1:10,2:13:2.37:84,2,0	0/0:20,0:20:2.84:0,3,9	0/0:12,1:15:0.47:0,0,1	1/1:27,2:28:2.62:84,3,0	1/1:20,6:25:8.35:324,8,0	1/1:17,2:21:2.98:84,3,0	1/1:25,4:28:3.83:52,4,0	1/1:14,7:25:8.97:257,9,0	0/1:17,1:17:26.72:164,0,27	1/1:7,0:9:0.75:75,1,0	0/1:16,0:18:5.82:177,0,6	1/1:13,0:12:6.28:62,6,0	1/1:17,0:13:3.01:30,3,0	./.	0/0:10,1:11:0.47:0,0,1	1/1:19,2:21:0.82:2,1,0	./.	1/1:20,8:29:26.94:664,27,0	1/1:20,5:24:5.77:173,6,0	1/1:2,3:6:9.03:251,9,0
chr10	27938040	.	CA	C	12474.08	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=10.683;DP=526;FS=0.862;HRun=1;HaplotypeScore=267.5786;InbreedingCoeff=0.9243;MQ=77.43;MQ0=0;MQRankSum=-14.029;QD=29.28;ReadPosRankSum=3.989;VQSLOD=4.1887;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,22:22:48.43:503,48,0	1/1:0,5:5:15:166,15,0	0/0:25,0:25:75.25:0,75,1178	0/0:22,0:22:66.20:0,66,1030	1/1:0,30:30:73.29:739,73,0	1/1:0,23:23:62.95:671,63,0	1/1:0,17:17:29.98:331,30,0	1/1:0,35:35:99:1263,105,0	1/1:0,19:19:54.08:613,54,0	1/1:0,15:15:45.10:530,45,0	1/1:1,11:12:24:258,24,0	1/1:0,15:15:42.04:467,42,0	1/1:0,31:31:90.20:1038,90,0	1/1:0,26:26:63.05:702,63,0	1/1:0,27:27:74.98:805,75,0	1/1:0,25:25:75.09:836,75,0	0/0:30,0:30:90.25:0,90,1372	0/0:23,0:23:66.22:0,66,1047	1/1:0,15:15:39.09:454,39,0	1/1:0,12:12:29.99:320,30,0	1/1:0,3:3:3.01:37,3,0	1/1:0,11:11:26.93:274,27,0	1/1:0,11:11:27.08:307,27,0	1/1:0,11:11:12:124,12,0	1/1:0,8:8:23.94:234,24,0	1/1:1,18:19:57.17:687,57,0	1/1:0,30:30:87.09:1001,87,0	1/1:0,4:4:9.03:115,9,0
chr10	27938045	.	AGGACC	A	12738.19	PASS	AC=44;AF=0.846;AN=52;BaseQRankSum=14.120;DP=324;FS=0.933;HRun=0;HaplotypeScore=269.7615;InbreedingCoeff=0.9339;MQ=89.80;MQ0=0;MQRankSum=-13.594;QD=56.61;ReadPosRankSum=8.617;VQSLOD=4.7100;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,10:10:30.10:594,30,0	1/1:0,3:3:9.03:191,9,0	0/0:26,0:26:78.27:0,78,2488	0/0:21,0:21:63.15:0,63,1878	1/1:1,21:22:63.19:1210,63,0	1/1:2,12:14:36.12:756,36,0	1/1:3,5:8:15.05:319,15,0	1/1:2,1:3:8.39:87,8,0	1/1:1,12:13:36.12:755,36,0	1/1:0,7:8:24.08:479,24,0	1/1:2,6:8:21.04:391,21,0	1/1:0,9:9:27.09:565,27,0	1/1:1,18:19:54.19:1123,54,0	1/1:2,11:13:33.11:686,33,0	1/1:1,12:13:36.12:757,36,0	1/1:0,17:17:51.18:1074,51,0	0/0:30,0:30:90.31:0,90,2949	0/0:22,0:22:66.23:0,66,2197	1/1:0,7:7:21.07:453,21,0	1/1:1,7:8:21.07:437,21,0	./.	1/1:0,6:6:18.06:371,18,0	1/1:1,8:9:24.08:491,24,0	1/1:0,5:5:8.70:186,9,0	1/1:0,5:5:15.05:314,15,0	1/1:0,13:13:39.13:830,39,0	1/1:1,10:12:33.11:670,33,0	./.
chr10	27938063	.	AT	A	5126.98	PASS	AC=44;AF=0.846;AN=52;BaseQRankSum=13.823;DP=311;FS=7.720;HRun=1;HaplotypeScore=271.6430;InbreedingCoeff=0.9142;MQ=67.46;MQ0=2;MQRankSum=-13.032;QD=23.74;ReadPosRankSum=7.161;VQSLOD=3.6078;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,10:11:29.66:222,30,0	1/1:0,3:3:8.98:72,9,0	0/0:24,0:24:72.23:0,72,1097	0/0:17,0:17:48.06:0,48,697	1/1:0,21:21:57.57:452,58,0	1/1:0,12:12:35.95:303,36,0	1/1:0,5:5:14.97:118,15,0	1/1:0,1:1:2.74:12,3,0	1/1:0,12:12:35.95:298,36,0	1/1:0,8:8:23.68:198,24,0	1/1:1,6:7:20.75:159,21,0	1/1:0,9:9:26.98:232,27,0	1/1:0,18:18:53.64:434,54,0	1/1:0,12:12:35.86:286,36,0	1/1:0,12:12:35.93:294,36,0	1/1:1,18:19:56.83:483,57,0	0/0:27,0:27:81.28:0,81,1294	0/0:27,0:27:75.23:0,75,1163	1/1:1,7:8:21.01:192,21,0	1/1:0,8:7:20.95:167,21,0	./.	1/1:0,6:6:17.96:145,18,0	1/1:1,8:8:23.95:198,24,0	1/1:0,5:5:11.93:91,12,0	1/1:0,5:5:15:131,15,0	1/1:1,13:14:42.01:374,42,0	1/1:0,11:11:32.86:267,33,0	./.
chr10	27938065	.	ATG	A	8183.80	PASS	AC=44;AF=0.846;AN=52;BaseQRankSum=13.562;DP=310;FS=6.983;HRun=0;HaplotypeScore=266.3664;InbreedingCoeff=0.9145;MQ=63.36;MQ0=2;MQRankSum=-12.361;QD=37.71;ReadPosRankSum=6.334;VQSLOD=4.1934;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,10:11:30.10:400,30,0	1/1:0,3:3:9.03:120,9,0	0/0:23,0:23:69.12:0,69,1184	0/0:17,0:17:42.14:0,42,739	1/1:0,21:21:58.41:741,58,0	1/1:1,12:13:38.61:487,39,0	1/1:0,5:5:15.05:200,15,0	1/1:0,1:1:2.98:22,3,0	1/1:0,12:12:36.12:481,36,0	1/1:0,8:8:24.08:309,24,0	1/1:1,6:7:21.02:258,21,0	1/1:0,9:9:27.09:357,27,0	1/1:0,18:18:54.16:701,54,0	1/1:1,11:12:36.08:462,36,0	1/1:0,12:12:36.12:478,36,0	1/1:2,17:19:57.14:724,57,0	0/0:27,0:27:75.26:0,75,1402	0/0:26,0:26:75.22:0,75,1337	1/1:1,7:8:21.07:273,21,0	1/1:1,7:7:21.07:280,21,0	./.	1/1:0,6:6:18.06:240,18,0	1/1:0,8:8:24.08:319,24,0	1/1:0,5:5:12.03:145,12,0	1/1:0,5:5:15.05:199,15,0	1/1:1,13:14:42.14:548,42,0	1/1:0,11:11:33.11:439,33,0	./.
chr10	27938584	.	A	AGCT	32333.01	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-10.870;DP=672;FS=1.501;HRun=0;HaplotypeScore=79.8769;InbreedingCoeff=0.9980;MQ=83.95;MQ0=0;MQRankSum=-8.790;QD=54.16;ReadPosRankSum=4.276;VQSLOD=7.1534;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,24:26:54.18:1226,54,0	1/1:0,15:15:41.94:833,42,0	0/0:23,0:23:62.86:0,63,971	0/0:23,0:23:65.79:0,66,1065	1/1:1,32:36:78.18:1720,78,0	1/1:2,21:23:51.11:1103,51,0	1/1:1,20:21:57.20:1346,57,0	1/1:6,32:41:99:2374,114,0	1/1:0,26:27:69.17:1574,69,0	1/1:0,29:30:90.30:2081,90,0	1/1:1,30:31:84.20:1909,84,0	1/1:2,22:24:57.13:1245,57,0	1/1:7,26:34:78.27:1812,78,0	1/1:1,26:27:66.02:1400,66,0	1/1:2,26:30:63.08:1383,63,0	1/1:1,24:26:66.23:1558,66,0	0/0:18,0:18:54.18:0,54,945	0/0:11,0:11:33.11:0,33,581	1/1:1,10:14:33.11:775,33,0	1/1:3,30:34:81.21:1796,81,0	1/1:0,12:12:24.08:568,24,0	1/1:1,18:20:36.04:779,36,0	1/1:3,23:27:63.12:1432,63,0	1/1:0,9:9:21.07:496,21,0	1/1:0,26:26:57.13:1294,57,0	1/1:1,22:23:49.17:1364,49,0	1/1:0,29:29:63.22:1486,63,0	1/1:0,12:12:33.11:780,33,0
chr10	27939891	.	G	GA	15435.17	PASS	AB=0.941;AC=49;AF=0.875;AN=56;BaseQRankSum=-9.819;DP=632;FS=0.534;HRun=8;HaplotypeScore=57.3258;InbreedingCoeff=0.8950;MQ=76.24;MQ0=3;MQRankSum=-1.816;QD=26.98;ReadPosRankSum=2.917;VQSLOD=5.4104;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,26:28:69.21:796,69,0	1/1:5,5:10:15.04:173,15,0	0/0:23,0:21:27.37:0,27,347	0/1:15,0:16:2.37:2,0,106	1/1:6,30:36:56.74:892,57,0	1/1:3,19:22:48.14:554,48,0	1/1:2,16:18:39.12:450,39,0	1/1:6,32:38:96.27:1096,96,0	1/1:2,18:20:51.15:589,51,0	1/1:6,26:32:75.20:846,75,0	1/1:2,18:20:51.15:588,51,0	1/1:1,25:26:69.21:796,69,0	1/1:6,21:27:59.97:668,60,0	1/1:8,19:27:60.18:687,60,0	1/1:2,18:20:48.14:554,48,0	1/1:3,18:21:45.13:519,45,0	0/0:23,0:23:54.01:0,54,489	0/0:14,0:14:42:0,42,377	1/1:2,15:17:23.24:495,23,0	1/1:2,19:20:51.12:573,51,0	1/1:3,9:13:26.91:291,27,0	1/1:1,32:33:96.24:1093,96,0	1/1:6,12:17:33.10:379,33,0	1/1:1,15:16:42.12:485,42,0	1/1:0,24:23:60.18:692,60,0	1/1:1,29:30:84.25:970,84,0	1/1:3,27:30:81.24:934,81,0	1/1:0,9:9:27.08:312,27,0
chr10	27940223	.	TA	T	4261.24	PASS	AB=0.746;AC=23;AF=0.479;AN=48;BaseQRankSum=2.882;DP=450;FS=131.125;HRun=1;HaplotypeScore=122.3872;InbreedingCoeff=-0.7814;MQ=40.63;MQ0=17;MQRankSum=1.399;QD=10.15;ReadPosRankSum=1.777;VQSLOD=1.4490;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:14,2:14:12.68:13,0,129	0/1:4,4:8:53.35:150,0,53	./.	./.	0/1:26,6:27:99:230,0,131	0/1:15,6:20:73.37:229,0,73	0/1:2,6:8:25.70:231,0,26	0/1:65,7:51:99:101,0,892	0/1:7,4:9:67.09:167,0,67	0/1:16,3:15:99:217,0,189	0/1:11,9:20:99:221,0,206	0/1:11,6:15:99:192,0,117	0/1:10,2:10:81.16:81,0,99	0/1:3,2:5:38.08:43,0,38	0/1:5,7:10:99:114,0,117	0/1:5,6:10:77.89:128,0,78	0/0:18,0:18:49.72:0,50,770	0/0:10,0:9:21.06:0,21,315	0/1:9,5:14:99:262,0,144	0/1:13,4:13:99:138,0,253	1/1:2,3:5:2.66:57,3,0	./.	./.	0/1:2,2:4:32.93:33,0,87	0/1:24,6:27:99:301,0,104	0/1:11,13:23:99:536,0,207	0/1:13,17:29:99:625,0,129	0/1:20,5:23:99:193,0,213
chr10	27940490	.	TTG	T	10980.99	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=7.281;DP=713;FS=1.928;HRun=0;HaplotypeScore=148.2626;InbreedingCoeff=0.9857;MQ=60.92;MQ0=13;MQRankSum=-0.484;QD=19.40;ReadPosRankSum=1.772;VQSLOD=5.2154;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:17,13:30:58.53:623,59,0	1/1:6,4:10:21.06:239,21,0	0/0:54,0:24:24.07:0,24,341	0/0:46,0:23:27.05:0,27,362	1/1:4,14:18:21.06:241,21,0	1/1:13,16:28:68.95:751,69,0	1/1:17,12:30:56.57:541,57,0	1/1:23,10:32:56.96:623,57,0	1/1:4,10:14:21.06:242,21,0	1/1:11,12:23:50.82:573,51,0	1/1:7,7:14:23.83:239,24,0	1/1:13,16:30:63.69:684,64,0	1/1:15,17:32:76.94:825,77,0	1/1:4,19:23:38.97:423,39,0	1/1:21,13:34:59.92:659,60,0	1/1:12,22:34:84.49:945,84,0	0/0:31,0:31:40.05:0,40,969	0/0:16,0:16:23.29:0,23,255	1/1:17,8:25:44.62:484,45,0	1/1:12,6:18:19.63:230,20,0	1/1:11,21:31:21.06:245,21,0	1/1:6,8:14:35.75:366,36,0	1/1:9,4:12:15.87:286,16,0	1/1:4,18:23:32.89:368,33,0	1/1:8,14:22:23.02:227,23,0	1/1:13,10:23:41.25:445,41,0	1/1:14,7:21:34.05:512,34,0	1/1:16,5:21:19.60:210,20,0
chr10	27940508	.	GTGTA	G	13319.07	PASS	AB=1.000;AC=49;AF=0.875;AN=56;BaseQRankSum=7.709;DP=696;FS=7.727;HRun=0;HaplotypeScore=159.6170;InbreedingCoeff=0.8073;MQ=54.38;MQ0=16;MQRankSum=1.979;QD=23.24;ReadPosRankSum=2.161;VQSLOD=4.2120;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:32,0:32:55.82:679,56,0	1/1:8,0:8:21.04:301,21,0	0/0:46,0:12:14.05:0,14,359	0/0:45,0:20:33.73:0,34,351	1/1:18,0:19:28.98:388,29,0	1/1:29,0:28:82.02:977,82,0	1/1:35,0:34:55.33:590,55,0	1/1:34,0:31:64.93:439,65,0	1/1:12,0:12:26.38:332,26,0	1/1:23,0:23:40.69:581,41,0	1/1:14,0:14:29.79:346,30,0	1/1:26,0:26:69.09:873,69,0	1/1:35,0:35:76.61:1004,77,0	1/1:23,0:23:44.38:591,44,0	1/1:28,0:28:59.10:720,59,0	1/1:36,0:36:88.03:1134,88,0	0/0:32,0:32:69.11:0,69,1445	0/1:16,0:16:23.46:23,0,383	1/1:26,0:26:13.62:430,14,0	1/1:9,12:21:9.37:387,9,0	1/1:26,0:25:27.52:327,28,0	1/1:19,0:19:38.43:466,38,0	1/1:17,0:16:29.65:311,30,0	1/1:22,0:22:41.05:511,41,0	1/1:23,0:23:43.06:454,43,0	1/1:11,7:18:47.41:646,47,0	1/1:23,0:23:46.68:498,47,0	1/1:8,0:8:23.68:312,24,0
chr10	27940512	.	ATG	A	10564.16	PASS	AB=0.727;AC=49;AF=0.875;AN=56;BaseQRankSum=6.579;DP=670;FS=15.403;HRun=0;HaplotypeScore=147.6162;InbreedingCoeff=0.8174;MQ=54.75;MQ0=15;MQRankSum=1.028;QD=18.80;ReadPosRankSum=2.065;VQSLOD=4.3753;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,18:30:39.09:445,39,0	1/1:1,5:7:17.84:190,18,0	0/0:37,0:11:12.51:0,13,188	0/0:43,0:17:27.05:0,27,336	1/1:13,7:20:29.96:336,30,0	1/1:14,16:29:73.07:821,73,0	1/1:10,23:32:38.90:414,39,0	1/1:18,13:28:33.09:392,33,0	1/1:6,6:12:24.07:284,24,0	1/1:14,8:22:48.12:555,48,0	1/1:3,13:16:26.64:265,27,0	1/1:8,16:24:54.16:632,54,0	1/1:9,22:32:59.93:657,60,0	1/1:11,12:23:43.94:500,44,0	1/1:7,22:29:47.67:542,48,0	1/1:8,28:36:66.19:769,66,0	0/0:27,0:28:52.40:0,52,794	0/1:10,6:16:86.84:87,0,154	1/1:12,14:26:42.12:491,42,0	1/1:13,7:20:29.86:326,30,0	1/1:16,10:25:27.08:318,27,0	1/1:4,14:18:30.09:348,30,0	1/1:7,10:16:17.74:211,18,0	1/1:13,12:25:48.12:558,48,0	1/1:16,7:23:42.12:487,42,0	1/1:7,10:17:41.46:471,41,0	1/1:7,13:21:23.81:257,24,0	1/1:3,5:8:18.05:208,18,0
chr10	27943282	.	G	GTTT	10240.72	PASS	AB=1.000;AC=49;AF=0.875;AN=56;BaseQRankSum=1.954;DP=658;FS=4.211;HRun=10;HaplotypeScore=119.0740;InbreedingCoeff=0.8269;MQ=72.42;MQ0=0;MQRankSum=0.610;QD=16.62;ReadPosRankSum=-0.632;VQSLOD=2.8294;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,0:26:47.33:354,47,0	1/1:0,0:17:44.81:339,45,0	0/1:18,0:17:50.10:50,0,75	0/0:10,0:10:18.04:0,18,210	1/1:2,1:28:71.17:556,71,0	1/1:7,2:28:51.70:429,52,0	1/1:2,0:21:44.81:340,45,0	1/1:8,2:41:98.24:888,98,0	1/1:4,0:21:23.41:167,23,0	1/1:7,0:32:71.73:551,72,0	1/1:1,0:22:49.81:357,50,0	1/1:2,1:16:28.16:243,28,0	1/1:8,1:20:43.11:364,43,0	1/1:7,0:33:59.28:441,59,0	1/1:4,0:21:38.23:283,38,0	1/1:3,1:23:52.07:426,52,0	0/0:22,0:23:54.03:0,54,638	0/0:9,0:9:20.99:0,21,255	1/1:2,15:20:54.04:807,54,0	1/1:7,0:36:86.44:637,86,0	1/1:4,0:10:14.94:114,15,0	1/1:3,0:32:74.69:568,75,0	1/1:3,2:27:53.77:446,54,0	1/1:3,0:28:58.03:437,58,0	1/1:7,1:24:35.05:298,35,0	1/1:2,0:22:55.02:412,55,0	1/1:10,0:37:65.13:488,65,0	1/1:1,0:13:29.97:245,30,0
chr10	27944147	.	T	TA	12415.89	PASS	AB=1.000;AC=49;AF=0.875;AN=56;BaseQRankSum=-5.978;DP=496;FS=15.333;HRun=8;HaplotypeScore=46.8151;InbreedingCoeff=0.8190;MQ=70.68;MQ0=0;MQRankSum=-1.698;QD=27.29;ReadPosRankSum=2.154;VQSLOD=3.9445;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,20:21:60.14:677,60,0	1/1:1,12:13:33.10:381,33,0	0/0:9,0:9:20.38:0,20,172	0/1:9,0:9:9.19:9,0,83	1/1:4,16:21:54.03:603,54,0	1/1:8,18:26:60.10:664,60,0	1/1:3,11:14:21.06:242,21,0	1/1:5,15:20:39.02:421,39,0	1/1:5,4:9:18.01:193,18,0	1/1:4,18:22:57.17:656,57,0	1/1:8,17:25:60.17:681,60,0	1/1:7,8:15:27.04:297,27,0	1/1:4,17:21:57.12:633,57,0	1/1:4,9:13:27.08:311,27,0	1/1:4,16:20:54.15:614,54,0	1/1:3,13:16:39.12:450,39,0	0/0:23,0:23:66.03:0,66,603	0/0:9,0:9:20.89:0,21,175	1/1:5,18:23:57.15:646,57,0	1/1:8,25:33:93.16:1026,93,0	1/1:1,7:8:18.05:208,18,0	1/1:3,11:15:44.91:476,45,0	1/1:5,17:22:60.16:680,60,0	1/1:1,2:3:6.02:69,6,0	1/1:6,18:24:60.14:678,60,0	1/1:8,15:23:60.18:701,60,0	1/1:10,14:26:62.85:684,63,0	1/1:1,12:13:36.11:415,36,0
chr10	27944236	.	T	TATATC	44264.78	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-10.640;DP=652;FS=7.907;HRun=0;HaplotypeScore=96.0867;InbreedingCoeff=0.9953;MQ=73.65;MQ0=0;MQRankSum=-7.234;QD=77.25;ReadPosRankSum=2.408;VQSLOD=6.7132;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,19:26:57.16:1699,57,0	1/1:0,9:9:27.09:845,27,0	0/0:24,0:24:65.85:0,66,1238	0/0:10,0:9:18.94:0,19,439	1/1:5,33:39:93.32:2902,93,0	1/1:7,36:43:99:3366,108,0	1/1:2,14:19:39.13:1214,39,0	1/1:11,18:29:81.28:2421,81,0	1/1:6,12:18:39.13:1212,39,0	1/1:2,11:13:39.12:1151,39,0	1/1:4,23:28:69.24:2145,69,0	1/1:2,18:20:48.16:1501,48,0	1/1:3,21:25:72.23:2159,72,0	1/1:2,12:14:36.12:1125,36,0	1/1:5,21:26:66.23:2057,66,0	1/1:1,17:18:45.15:1408,45,0	0/0:34,0:34:90.29:0,90,1870	0/0:11,0:11:33.11:0,33,703	1/1:6,11:17:48.11:1361,48,0	1/1:11,35:48:99:3429,111,0	1/1:1,9:11:30.10:936,30,0	1/1:2,22:24:63.22:1968,63,0	1/1:2,23:24:72.25:2246,72,0	1/1:1,8:10:18.06:564,18,0	1/1:7,30:37:93.31:2842,93,0	1/1:5,24:29:75.23:2221,75,0	1/1:9,19:30:78.25:2248,78,0	1/1:1,14:15:42.13:1246,42,0
chr10	27945217	.	AAAAC	A	13730.65	PASS	AB=0.585;AC=46;AF=0.821;AN=56;BaseQRankSum=6.250;DP=598;FS=7.791;HRun=0;HaplotypeScore=104.9846;InbreedingCoeff=0.7502;MQ=70.38;MQ0=5;MQRankSum=-3.384;QD=28.43;ReadPosRankSum=5.123;VQSLOD=4.2697;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,27:36:63.17:1025,63,0	1/1:5,4:9:9.03:146,9,0	0/0:35,0:24:33.58:0,34,780	0/0:24,0:22:38.57:0,39,696	0/1:9,23:33:9.72:835,0,10	1/1:7,22:29:54.18:878,54,0	1/1:7,11:18:27.09:439,27,0	1/1:18,14:32:42.14:666,42,0	1/1:8,11:19:30.10:488,30,0	1/1:10,11:21:33.11:537,33,0	1/1:3,12:15:33.07:508,33,0	1/1:6,6:12:18.06:293,18,0	1/1:6,15:21:42.14:683,42,0	1/1:4,7:11:21.07:342,21,0	1/1:7,19:26:48.16:781,48,0	1/1:4,15:19:39.13:635,39,0	0/0:38,0:38:81.28:0,81,1937	0/0:18,0:18:32.77:0,33,779	1/1:10,8:18:27.08:401,27,0	1/1:8,10:18:33.03:479,33,0	0/1:4,9:13:12.71:363,0,13	1/1:4,12:16:36.08:557,36,0	1/1:6,22:28:54.18:879,54,0	1/1:5,13:18:36.12:586,36,0	1/1:6,8:14:21.07:342,21,0	1/1:5,20:25:60.17:940,60,0	1/1:12,15:27:45.15:732,45,0	1/1:0,4:4:12.04:195,12,0
chr10	27945485	.	GCA	G	213.87	PASS	AB=0.972;AC=19;AF=0.339;AN=56;BaseQRankSum=7.314;DP=464;FS=30.239;HRun=0;HaplotypeScore=145.7613;InbreedingCoeff=-0.1607;MQ=55.30;MQ0=10;MQRankSum=-7.162;QD=0.79;ReadPosRankSum=5.818;VQSLOD=0.9348;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:24,2:26:6.37:6,0,42	0/0:11,0:11:25.66:0,26,216	0/0:13,0:6:11.83:0,12,152	0/1:16,0:5:14.32:14,0,34	0/1:13,0:13:1.32:1,0,2	0/1:14,1:15:13.90:14,0,18	0/0:27,2:29:8.99:0,9,74	0/0:13,0:12:8.49:0,8,82	0/1:18,1:19:8.25:59,0,8	1/1:15,0:14:5.19:33,5,0	0/1:11,2:13:7.80:8,0,17	0/1:12,0:12:13.17:19,0,13	0/1:18,1:19:7.92:54,0,8	0/1:20,1:21:20.34:20,0,22	0/1:10,0:10:4.67:5,0,52	0/0:13,1:14:3.20:0,3,45	0/0:32,0:32:54.93:0,55,642	0/0:19,0:18:35.90:0,36,481	0/1:24,0:24:30.01:30,0,82	0/0:15,2:17:1.47:0,1,22	0/0:24,0:21:5.49:0,5,48	0/0:6,2:8:3:0,3,25	0/0:13,0:12:7.82:0,8,73	0/1:13,0:13:2.25:2,0,19	0/1:16,0:16:6.96:7,0,16	0/1:18,0:17:20.40:20,0,52	0/1:17,0:17:3.14:47,0,3	1/1:4,0:4:2.87:19,3,0
chr10	27945491	.	GCGCACA	G	7204.09	PASS	AB=0.886;AC=42;AF=0.808;AN=52;BaseQRankSum=-1.995;DP=441;FS=10.819;HRun=0;HaplotypeScore=138.1766;InbreedingCoeff=0.5735;MQ=49.51;MQ0=12;MQRankSum=-1.031;QD=21.70;ReadPosRankSum=1.998;VQSLOD=3.9477;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:18,8:27:27:335,27,0	0/1:8,0:8:23.15:131,0,23	0/0:10,0:3:6:0,6,51	./.	1/1:6,7:13:11.79:117,12,0	1/1:9,2:14:21:229,21,0	0/0:3,25:28:0:0,0,0	1/1:2,9:9:21.02:238,21,0	1/1:2,17:20:15.05:342,15,0	1/1:12,2:14:41.93:579,42,0	1/1:2,6:12:5.62:105,6,0	1/1:0,10:11:14.88:283,15,0	1/1:10,9:19:50.50:801,50,0	1/1:12,9:21:38.90:525,39,0	1/1:3,3:7:15.02:248,15,0	1/1:8,2:12:22.39:210,22,0	0/0:29,0:30:50.42:0,50,576	0/0:20,0:19:35.63:0,36,493	1/1:4,18:22:56.73:839,57,0	1/1:7,6:16:11.87:122,12,0	1/1:22,1:20:23.81:245,24,0	./.	1/1:1,11:11:0.89:3,1,0	1/1:8,5:13:11.98:109,12,0	1/1:5,8:15:17.85:200,18,0	0/1:12,5:16:12.71:637,0,13	1/1:7,9:18:45.01:812,45,0	1/1:2,2:5:7.82:96,8,0
chr10	27945493	.	G	GCACACACA	667.95	PASS	AB=1.000;AC=10;AF=0.208;AN=48;BaseQRankSum=-4.128;DP=441;FS=0.000;HRun=0;HaplotypeScore=174.9152;InbreedingCoeff=0.3447;MQ=49.31;MQ0=13;MQRankSum=-1.376;QD=5.30;ReadPosRankSum=-2.608;VQSLOD=1.8619;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:24:5.43:0,5,63	0/0:5,0:8:1.48:0,1,105	./.	./.	0/0:14,0:14:0.83:0,1,3	0/0:13,0:14:2.50:0,2,9	./.	1/1:11,0:9:2.03:15,2,0	0/0:19,0:20:15.01:0,15,201	0/0:13,0:12:12.79:0,13,185	0/0:10,0:12:5.88:0,6,36	0/1:12,0:12:16.74:17,0,192	0/0:18,0:19:7.67:0,8,300	0/1:20,0:21:7.42:7,0,156	0/0:7,0:7:8.97:0,9,87	0/0:12,0:12:5.81:0,6,69	1/1:19,12:33:11.99:258,12,0	1/1:10,10:20:12.04:491,12,0	0/0:20,0:21:28.70:0,29,507	0/1:13,0:16:0.15:0,0,0	0/0:24,0:21:2.98:0,3,21	./.	0/1:12,0:11:0.05:0,0,0	0/0:14,0:14:0.47:0,0,2	0/0:15,0:15:6.02:0,6,112	0/0:16,0:15:7.06:0,7,395	0/0:18,0:18:11.74:0,12,376	0/0:5,0:5:2.97:0,3,10
chr10	27945585	.	TA	T	8382.99	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=3.662;DP=393;FS=0.000;HRun=6;HaplotypeScore=45.6905;InbreedingCoeff=0.9044;MQ=71.76;MQ0=0;MQRankSum=1.304;QD=25.17;ReadPosRankSum=2.107;VQSLOD=4.3060;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,12:13:21.05:226,21,0	1/1:1,4:5:12.03:129,12,0	0/0:13,0:10:10.78:0,11,135	0/0:5,0:3:5.75:0,6,45	1/1:4,20:24:57.14:611,57,0	1/1:0,17:17:39.10:419,39,0	1/1:0,8:8:21.05:226,21,0	1/1:4,24:28:69.17:741,69,0	1/1:5,3:8:15.04:161,15,0	1/1:1,21:22:63.13:666,63,0	1/1:0,14:14:39.10:419,39,0	1/1:0,12:12:24.06:258,24,0	1/1:2,8:10:21.05:226,21,0	1/1:0,13:13:33.08:355,33,0	1/1:0,6:6:15.04:161,15,0	1/1:0,13:13:33.08:355,33,0	0/0:24,0:24:63.18:0,63,793	0/0:18,0:17:47.87:0,48,553	1/1:3,15:18:45.10:476,45,0	1/1:0,10:10:24.06:257,24,0	1/1:2,9:11:24.06:258,24,0	1/1:1,2:3:6.02:64,6,0	1/1:0,7:7:18:180,18,0	1/1:0,11:11:27.07:290,27,0	1/1:2,16:18:42.11:451,42,0	1/1:2,17:19:48.12:515,48,0	1/1:1,22:23:48.04:516,48,0	1/1:1,19:20:41.99:423,42,0
chr10	27948462	.	GAAAC	G	6675.45	PASS	AB=0.967;AC=44;AF=0.846;AN=52;BaseQRankSum=-1.541;DP=491;FS=1.343;HRun=0;HaplotypeScore=181.3754;InbreedingCoeff=-0.1942;MQ=38.22;MQ0=13;MQRankSum=-1.424;QD=13.62;ReadPosRankSum=-4.000;VQSLOD=3.6156;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:22:96.82:97,0,119	1/1:9,0:8:20.83:155,21,0	./.	./.	1/1:27,9:35:65.86:540,66,0	1/1:20,6:23:41.86:353,42,0	1/1:13,0:12:14.72:81,15,0	1/1:23,0:21:9.97:24,10,0	1/1:9,2:10:14.84:206,15,0	1/1:16,5:18:41.81:441,42,0	0/1:16,0:16:66.48:83,0,66	1/1:8,0:8:21.58:146,22,0	0/1:11,6:17:15.26:393,0,15	0/1:16,0:16:86.60:87,0,131	1/1:15,4:16:38.66:354,39,0	1/1:21,0:20:30.33:289,30,0	0/1:20,0:19:40.25:40,0,171	0/1:15,0:11:31.04:31,0,128	1/1:23,4:23:39.27:408,39,0	1/1:14,6:19:47.56:445,48,0	1/1:5,0:5:2.94:18,3,0	1/1:19,2:20:53.17:389,53,0	1/1:17,2:18:36.30:287,36,0	0/1:13,0:13:51.93:94,0,52	0/1:27,0:27:99:202,0,112	1/1:14,5:19:52.98:563,53,0	1/1:14,11:24:54.35:670,54,0	1/1:13,4:15:9.54:279,10,0
chr10	27948478	.	GAAAC	G	6395.45	PASS	AB=0.955;AC=42;AF=0.750;AN=56;BaseQRankSum=-0.364;DP=478;FS=7.159;HRun=0;HaplotypeScore=187.5544;InbreedingCoeff=-0.0260;MQ=37.56;MQ0=11;MQRankSum=-1.102;QD=13.78;ReadPosRankSum=3.036;VQSLOD=3.8737;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:22:97.51:98,0,119	1/1:8,0:7:14.82:104,15,0	0/1:4,0:1:0:0,0,0	0/0:6,0:3:4.48:0,4,43	1/1:37,0:35:54.08:522,54,0	1/1:27,0:25:44.48:388,44,0	1/1:12,0:12:8.84:55,9,0	0/0:8,0:6:0.81:0,1,2	1/1:13,0:12:21.79:210,22,0	1/1:19,0:16:33.42:385,33,0	0/1:16,0:16:64.95:82,0,65	1/1:9,0:9:14.86:109,15,0	0/1:14,0:14:48.24:338,0,48	0/1:17,0:17:99:100,0,128	1/1:18,0:16:29:274,29,0	1/1:23,0:20:27.91:270,28,0	0/1:14,5:19:34.61:395,0,35	0/1:12,3:12:99:113,0,121	1/1:25,0:24:27.59:335,28,0	1/1:25,0:24:44.37:425,44,0	1/1:6,0:6:2.96:19,3,0	1/1:17,0:17:35.88:267,36,0	1/1:20,0:19:27.52:233,28,0	0/1:13,0:13:56.80:57,0,67	0/1:26,0:26:99:186,0,114	1/1:20,0:20:53.40:550,53,0	1/1:23,0:22:53.95:677,54,0	0/1:10,0:10:59.91:205,0,60
chr10	27948524	.	AAGAGAGAG	A	8034.06	PASS	AB=0.857;AC=45;AF=0.865;AN=52;BaseQRankSum=0.044;DP=510;FS=5.468;HRun=0;HaplotypeScore=188.4904;InbreedingCoeff=0.5296;MQ=40.44;MQ0=21;MQRankSum=-4.011;QD=19.84;ReadPosRankSum=0.446;VQSLOD=4.1169;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:12,6:16:11.95:282,12,0	1/1:5,2:6:5.98:96,6,0	./.	./.	1/1:21,7:28:12.04:263,12,0	1/1:15,7:21:21.07:489,21,0	1/1:17,4:21:12.04:302,12,0	0/0:29,0:26:2.29:0,2,6	1/1:7,5:12:18.06:433,18,0	1/1:9,2:11:8.86:207,9,0	1/1:9,5:14:6.02:151,6,0	1/1:6,6:12:18.06:453,18,0	1/1:7,6:15:18.06:414,18,0	1/1:11,8:20:21.04:454,21,0	1/1:11,6:17:18.06:414,18,0	1/1:10,13:21:1.46:869,1,0	0/0:12,0:20:20.97:0,21,171	0/0:6,0:10:15.05:0,15,336	1/1:16,0:27:21.07:391,21,0	1/1:11,0:25:36.58:640,37,0	1/1:9,0:13:3.01:56,3,0	0/1:10,2:12:8.92:142,0,9	1/1:11,5:16:15.05:339,15,0	1/1:13,3:17:5.91:111,6,0	1/1:12,7:20:24.08:585,24,0	1/1:11,4:16:12:227,12,0	1/1:6,9:17:24.08:565,24,0	1/1:7,4:8:6.02:151,6,0
chr10	27949117	.	T	TACACACACACAC	8427.19	PASS	AB=0.917;AC=44;AF=0.815;AN=54;BaseQRankSum=-0.839;DP=578;FS=2.075;HRun=0;HaplotypeScore=233.9132;InbreedingCoeff=0.4885;MQ=62.64;MQ0=4;MQRankSum=-1.720;QD=18.20;ReadPosRankSum=-1.045;VQSLOD=3.9108;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:27:6.47:187,6,0	1/1:9,2:13:14.97:625,15,0	0/0:30,0:22:2.83:0,3,27	0/0:29,0:20:1.24:0,1,3	1/1:20,3:22:3.60:177,4,0	1/1:36,0:35:17.01:516,17,0	1/1:21,0:21:18.04:636,18,0	1/1:34,0:33:40.37:900,40,0	1/1:18,0:18:3.01:41,3,0	1/1:24,5:26:36.09:1404,36,0	./.	0/1:10,0:10:0:0,0,0	1/1:23,0:22:23.34:778,23,0	1/1:16,0:16:11.60:284,12,0	1/1:20,0:19:4.69:199,5,0	1/1:18,0:18:8.25:285,8,0	0/0:25,0:33:7.20:0,7,1159	0/0:9,0:12:8.69:0,9,227	1/1:13,0:13:6.02:96,6,0	1/1:20,0:20:9.02:224,9,0	1/1:18,0:18:6.02:170,6,0	1/1:18,0:18:3.01:142,3,0	1/1:11,1:11:5.60:288,6,0	0/1:16,2:19:0:1,0,0	1/1:26,2:29:2.59:174,3,0	1/1:16,0:16:16.65:534,17,0	1/1:17,1:19:15.84:476,16,0	1/1:4,0:5:6.02:291,6,0
chr10	27950307	.	T	TA	14307.41	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-8.185;DP=532;FS=2.409;HRun=8;HaplotypeScore=43.1106;InbreedingCoeff=0.9505;MQ=77.01;MQ0=0;MQRankSum=-3.437;QD=28.90;ReadPosRankSum=1.633;VQSLOD=5.0301;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,8:9:21.06:242,21,0	1/1:0,7:7:18.05:208,18,0	0/0:14,0:14:27:0,27,247	0/0:8,0:8:12.01:0,12,110	1/1:6,27:33:50.76:838,51,0	1/1:3,20:23:60.18:692,60,0	1/1:4,10:15:8.47:333,8,0	1/1:6,25:31:78.17:858,78,0	1/1:2,7:9:21.06:242,21,0	1/1:1,22:23:66.14:738,66,0	1/1:5,19:24:29.70:596,30,0	1/1:2,16:18:51.15:587,51,0	1/1:1,20:21:60.18:691,60,0	1/1:3,18:22:54.14:611,54,0	1/1:1,27:28:72.21:831,72,0	1/1:0,21:21:60.18:692,60,0	0/0:11,0:11:33.01:0,33,297	0/0:4,0:4:9:0,9,82	1/1:3,16:19:48.14:554,48,0	1/1:9,31:40:93.23:1059,93,0	1/1:1,14:15:33.10:381,33,0	1/1:1,14:15:33.10:381,33,0	1/1:1,18:19:51.15:589,51,0	1/1:1,15:16:45.13:519,45,0	1/1:2,16:18:48.14:554,48,0	1/1:4,32:36:99:1141,99,0	1/1:1,24:25:63.19:727,63,0	1/1:0,8:8:21.06:242,21,0
chr10	27951219	.	G	GA	8781.30	PASS	AB=0.719;AC=48;AF=0.857;AN=56;BaseQRankSum=-2.099;DP=463;FS=6.425;HRun=10;HaplotypeScore=95.1013;InbreedingCoeff=0.6447;MQ=65.63;MQ0=0;MQRankSum=-2.785;QD=20.86;ReadPosRankSum=-0.564;VQSLOD=4.9982;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:9,33:44:99:1149,117,0	0/1:1,6:7:3.60:165,0,4	0/0:7,0:7:14.34:0,14,90	0/0:12,0:12:8.97:0,9,74	1/1:6,7:13:8.28:246,8,0	1/1:4,12:16:42.07:435,42,0	1/1:5,16:22:23.32:437,23,0	1/1:8,23:32:50.36:704,50,0	1/1:6,7:13:33.04:323,33,0	1/1:6,9:15:1.77:257,2,0	1/1:6,8:15:23.85:223,24,0	1/1:6,5:11:23.96:220,24,0	1/1:7,4:11:26.98:251,27,0	1/1:3,14:18:44.94:448,45,0	1/1:7,8:15:30.06:312,30,0	1/1:4,15:19:57.07:584,57,0	0/0:22,0:22:44.89:0,45,366	0/1:8,1:9:20:20,0,62	1/1:11,8:20:11.22:282,11,0	1/1:10,10:20:26.32:435,26,0	1/1:7,8:16:26.86:258,27,0	1/1:3,5:8:15:147,15,0	1/1:9,8:17:35.97:347,36,0	1/1:4,10:16:29.78:284,30,0	1/1:2,12:14:36.05:371,36,0	1/1:12,5:18:26.79:234,27,0	1/1:9,10:19:40.40:392,40,0	1/1:3,8:12:26.88:256,27,0
chr10	27951258	.	GCACACACA	G	15727.39	PASS	AB=0.743;AC=44;AF=0.815;AN=54;BaseQRankSum=1.351;DP=451;FS=42.426;HRun=0;HaplotypeScore=146.0461;InbreedingCoeff=0.6755;MQ=54.39;MQ0=7;MQRankSum=-7.354;QD=43.57;ReadPosRankSum=1.211;VQSLOD=2.9164;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:18,13:32:54.10:1036,54,0	1/1:1,4:5:12.04:312,12,0	0/0:29,0:13:24.05:0,24,644	0/0:21,0:13:21.07:0,21,803	1/1:2,11:14:33.02:702,33,0	1/1:4,8:13:27.09:658,27,0	1/1:8,8:16:14.04:627,14,0	0/1:26,5:31:63.25:404,0,63	1/1:5,9:15:6.14:656,6,0	1/1:2,13:15:39.13:914,39,0	1/1:6,9:15:27.09:674,27,0	1/1:2,14:16:42.08:1033,42,0	1/1:1,7:8:18.06:468,18,0	1/1:3,6:10:26.96:560,27,0	1/1:3,14:18:42.14:1071,42,0	1/1:6,12:18:29.98:661,30,0	0/0:6,0:21:42.13:0,42,871	0/0:4,0:6:15.05:0,15,257	1/1:8,5:13:21.01:434,21,0	1/1:5,18:23:54.18:1275,54,0	./.	1/1:3,8:11:1.79:374,2,0	1/1:3,14:17:30.10:752,30,0	0/1:6,9:15:31.21:372,0,31	1/1:5,6:12:24.07:523,24,0	1/1:2,15:17:42.13:1016,42,0	1/1:4,14:18:33.58:815,34,0	1/1:3,4:8:18.01:387,18,0
chr10	27951364	.	A	ACT	5208.77	PASS	AB=0.821;AC=37;AF=0.685;AN=54;BaseQRankSum=-1.647;DP=215;FS=45.821;HRun=0;HaplotypeScore=56.3093;InbreedingCoeff=-0.0364;MQ=66.42;MQ0=7;MQRankSum=-1.574;QD=25.41;ReadPosRankSum=4.848;VQSLOD=3.2653;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:4,3:6:9.54:182,0,10	1/1:2,0:2:6.02:93,6,0	0/1:9,0:4:1.09:1,0,8	0/1:24,0:8:1.52:2,0,59	1/1:8,5:13:17.64:337,18,0	0/1:4,5:8:4.26:277,0,4	1/1:3,0:3:2.99:85,3,0	0/1:20,12:31:68.37:915,0,68	0/1:4,1:5:48.07:60,0,48	0/1:6,1:6:11.22:231,0,11	1/1:2,0:2:2.17:51,2,0	0/1:4,2:6:7.96:163,0,8	1/1:7,4:10:17.47:342,17,0	0/1:2,2:4:16.76:61,0,17	0/1:2,1:3:19.34:75,0,19	1/1:1,3:4:9.03:164,9,0	0/0:7,0:7:6.02:0,6,89	0/0:3,0:3:5.75:0,6,49	1/1:6,0:5:15.05:225,15,0	1/1:5,1:5:15.05:251,15,0	0/1:3,0:3:0:0,0,0	1/1:1,0:1:3.01:52,3,0	0/1:2,0:2:0.04:47,0,0	./.	1/1:5,7:9:30.10:431,30,0	0/1:5,3:8:39.79:219,0,40	1/1:10,8:16:6.18:587,6,0	1/1:5,3:8:21.07:359,21,0
chr10	27951367	.	T	TATATA	4523.34	PASS	AB=0.864;AC=32;AF=0.615;AN=52;BaseQRankSum=-2.848;DP=205;FS=21.685;HRun=0;HaplotypeScore=63.1765;InbreedingCoeff=-0.2149;MQ=62.21;MQ0=7;MQRankSum=-0.113;QD=27.41;ReadPosRankSum=4.603;VQSLOD=2.8844;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,2:6:9.32:275,9,0	1/1:1,0:1:2.98:21,3,0	0/0:7,0:3:3:0,3,28	0/0:23,0:8:2.92:0,3,34	0/1:10,3:13:17.95:229,0,18	0/1:4,4:7:52.52:190,0,53	0/1:3,0:3:16.58:34,0,17	1/1:26,3:30:64.23:1183,64,0	0/1:5,0:5:12.40:106,0,12	0/1:5,1:6:4.92:215,0,5	./.	1/1:2,2:4:12.04:253,12,0	0/1:9,1:9:34.10:123,0,34	0/1:2,2:4:3.45:34,0,3	0/1:2,0:2:16.62:34,0,17	1/1:1,2:3:9.03:211,9,0	0/0:7,0:7:2.98:0,3,38	0/1:4,0:4:41.02:41,0,53	1/1:5,0:4:8.92:98,9,0	1/1:3,1:5:2.05:196,2,0	0/1:2,0:2:0:0,0,0	1/1:2,0:2:3:26,3,0	0/1:2,0:2:3.86:35,0,4	./.	0/1:7,4:8:20.47:20,0,133	0/1:6,1:8:18.67:267,0,19	0/1:12,5:17:15:504,0,15	1/1:3,3:8:17.73:430,18,0
chr10	27951371	.	T	TA	440.56	PASS	AB=0.933;AC=14;AF=0.269;AN=52;BaseQRankSum=6.170;DP=195;FS=4.204;HRun=1;HaplotypeScore=60.4589;InbreedingCoeff=0.0204;MQ=57.10;MQ0=7;MQRankSum=-4.908;QD=4.36;ReadPosRankSum=7.136;VQSLOD=0.5034;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:8,1:8:1.21:1,0,96	1/1:1,0:1:2.98:21,3,0	0/0:6,0:2:3:0,3,28	0/0:20,0:6:3.10:0,3,34	0/0:12,1:13:10.68:0,11,204	0/0:7,1:7:1.41:0,1,86	0/0:2,0:2:6:0,6,57	0/1:24,6:29:99:283,0,331	0/0:4,1:5:13.82:0,14,121	0/0:7,0:6:1.19:0,1,79	0/0:4,0:4:6.01:0,6,63	0/1:4,0:4:2.10:2,0,45	0/1:8,3:10:1.64:2,0,126	0/0:4,0:4:6.38:0,6,44	0/0:2,0:2:5.99:0,6,52	1/1:2,1:3:7.75:58,8,0	0/0:6,0:6:3.01:0,3,38	0/0:4,0:4:6.91:0,7,78	0/1:5,0:4:23.23:64,0,23	0/1:5,0:4:4.08:4,0,34	./.	0/0:1,0:1:3.01:0,3,38	0/0:2,0:2:5.50:0,6,44	./.	0/1:10,0:7:20.47:20,0,133	0/0:6,1:7:4.34:0,4,123	0/1:15,1:14:69.09:69,0,121	1/1:7,0:7:14.30:50,14,0
chr10	27951806	.	G	GTTT	20628.59	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-4.908;DP=506;FS=8.097;HRun=7;HaplotypeScore=71.4295;InbreedingCoeff=0.9092;MQ=66.87;MQ0=1;MQRankSum=-1.684;QD=46.67;ReadPosRankSum=1.627;VQSLOD=4.3629;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,10:16:43.24:651,43,0	1/1:0,11:11:33.03:594,33,0	0/0:7,0:6:1.97:0,2,52	0/0:10,0:10:27.08:0,27,349	1/1:5,21:28:69.06:1181,69,0	1/1:5,15:22:45.13:894,45,0	1/1:5,7:12:21.07:436,21,0	1/1:10,17:27:54.17:1080,54,0	1/1:3,12:15:36.12:723,36,0	1/1:1,26:27:78.24:1546,78,0	1/1:2,19:21:54.18:1092,54,0	1/1:1,10:12:30.10:590,30,0	1/1:2,16:19:48.13:953,48,0	1/1:3,10:14:21.05:395,21,0	1/1:2,22:24:57.20:1182,57,0	1/1:2,13:15:33.11:685,33,0	0/0:23,0:23:48.01:0,48,609	0/0:24,0:24:60.19:0,60,818	1/1:1,10:12:33.10:646,33,0	1/1:5,20:25:63.17:1202,63,0	1/1:1,2:3:5.98:82,6,0	1/1:3,13:16:42.06:782,42,0	1/1:2,16:20:54.08:995,54,0	1/1:0,12:12:33.11:684,33,0	1/1:1,21:23:66.18:1268,66,0	1/1:3,23:26:69.22:1392,69,0	1/1:8,21:28:54.10:1030,54,0	1/1:1,8:12:30.06:544,30,0
chr10	27954482	.	A	AG	20510.42	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-5.679;DP=586;FS=1.145;HRun=1;HaplotypeScore=70.5442;InbreedingCoeff=0.9534;MQ=76.23;MQ0=0;MQRankSum=-0.781;QD=39.07;ReadPosRankSum=1.866;VQSLOD=5.5640;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,21:21:54.10:761,54,0	1/1:0,9:9:24.08:350,24,0	0/0:11,0:11:3.71:0,4,134	0/0:13,0:13:30.90:0,31,327	1/1:0,24:24:72.13:995,72,0	1/1:4,29:33:87.29:1270,87,0	1/1:0,14:14:27.09:394,27,0	1/1:0,39:39:99:1570,114,0	1/1:0,16:16:39.13:569,39,0	1/1:0,29:29:87.28:1249,87,0	1/1:0,25:25:72.10:993,72,0	1/1:0,20:20:57.19:830,57,0	1/1:1,31:32:81.10:1182,81,0	1/1:0,27:27:78.26:1138,78,0	1/1:0,18:17:45.15:654,45,0	1/1:0,15:15:37.01:527,37,0	0/0:24,0:24:69.20:0,69,876	0/0:13,0:13:39.06:0,39,483	1/1:1,22:23:66.12:898,66,0	1/1:1,24:25:69.12:957,69,0	1/1:0,19:19:54.18:788,54,0	1/1:0,14:14:42.02:562,42,0	1/1:2,22:24:51.13:744,51,0	1/1:0,19:19:54.18:788,54,0	1/1:1,18:19:54.18:788,54,0	1/1:0,24:24:72.21:1011,72,0	1/1:0,27:27:78.26:1138,78,0	1/1:0,9:9:24.08:350,24,0
chr10	27955431	.	GA	G	15737.99	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=0.768;DP=617;FS=1.528;HRun=7;HaplotypeScore=61.4248;InbreedingCoeff=0.9766;MQ=71.02;MQ0=0;MQRankSum=-1.486;QD=26.99;ReadPosRankSum=1.687;VQSLOD=5.6716;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,18:21:45.10:459,45,0	1/1:1,10:11:30.07:306,30,0	0/0:7,0:7:21.06:0,21,251	0/0:9,0:8:7.92:0,8,89	1/1:3,24:27:66.14:673,66,0	1/1:4,26:30:69.15:704,69,0	1/1:1,10:11:30.07:306,30,0	1/1:4,37:41:99:1126,111,0	1/1:3,11:14:33.07:337,33,0	1/1:2,32:34:90.18:911,90,0	1/1:3,30:33:87.19:886,87,0	1/1:1,15:16:42.09:429,42,0	1/1:0,25:25:75.17:765,75,0	1/1:1,19:20:57.13:581,57,0	1/1:3,29:32:87.20:888,87,0	1/1:2,29:31:81.18:826,81,0	0/0:11,0:11:33.06:0,33,397	0/0:7,0:7:21.07:0,21,264	1/1:0,22:22:66.15:673,66,0	1/1:3,37:40:99:1132,111,0	1/1:1,12:13:36.08:367,36,0	1/1:0,16:16:39.08:398,39,0	1/1:0,22:22:63.14:643,63,0	1/1:0,18:18:48.11:490,48,0	1/1:1,26:27:66.15:673,66,0	1/1:1,29:30:84.16:848,84,0	1/1:3,30:33:84.18:857,84,0	1/1:0,16:16:45.10:459,45,0
chr10	27956023	.	G	GA	10627.88	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-5.588;DP=294;FS=10.464;HRun=2;HaplotypeScore=25.3763;InbreedingCoeff=0.8122;MQ=67.21;MQ0=0;MQRankSum=-1.294;QD=38.79;ReadPosRankSum=2.606;VQSLOD=3.8506;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,8:8:24.08:344,24,0	1/1:1,5:6:15.05:215,15,0	0/0:4,0:4:9.50:0,9,109	0/0:2,0:2:3.01:0,3,37	1/1:2,16:18:42.07:576,42,0	1/1:0,8:8:21.07:300,21,0	1/1:0,6:6:15.05:215,15,0	1/1:3,19:21:54.17:750,54,0	1/1:0,6:6:15.05:215,15,0	1/1:0,16:16:48.16:687,48,0	1/1:0,21:21:63.17:879,63,0	1/1:0,10:10:30.10:429,30,0	1/1:0,9:9:24.08:343,24,0	1/1:0,4:4:12.04:172,12,0	1/1:0,11:11:33.11:472,33,0	1/1:1,5:6:15.05:215,15,0	0/0:9,0:9:18.06:0,18,223	0/0:5,0:5:15.03:0,15,171	1/1:1,14:15:42.09:562,42,0	1/1:0,19:19:57.16:794,57,0	1/1:0,5:5:9.03:129,9,0	1/1:0,2:2:6.02:86,6,0	1/1:0,13:13:36.12:515,36,0	1/1:0,2:2:3.01:43,3,0	1/1:0,14:14:39.13:558,39,0	1/1:0,19:19:54.17:755,54,0	1/1:0,28:28:78.26:1115,78,0	1/1:0,6:6:18.06:258,18,0
chr10	27958496	.	C	CA	15186.53	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=7.153;DP=570;FS=11.834;HRun=7;HaplotypeScore=112.1731;InbreedingCoeff=0.8842;MQ=79.82;MQ0=0;MQRankSum=-1.459;QD=31.12;ReadPosRankSum=1.619;VQSLOD=3.3309;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,7:9:21.06:253,21,0	1/1:1,6:7:21.06:254,21,0	0/0:20,0:20:18.65:0,19,340	0/0:14,0:12:0.05:0,0,87	1/1:1,33:34:96.29:1160,96,0	1/1:1,14:15:42.13:507,42,0	1/1:4,9:13:24.07:290,24,0	1/1:3,20:23:57.13:677,57,0	1/1:8,21:29:49.24:850,49,0	1/1:6,20:26:66.19:779,66,0	1/1:6,24:30:75.21:885,75,0	1/1:4,16:20:54.14:630,54,0	1/1:3,18:21:57.17:685,57,0	1/1:4,12:16:45.10:510,45,0	1/1:1,20:21:60.18:725,60,0	1/1:4,21:25:66.19:787,66,0	0/0:33,0:32:78.07:0,78,735	0/0:15,0:14:35.98:0,36,329	1/1:7,16:23:60.16:705,60,0	1/1:1,18:19:57.16:673,57,0	1/1:3,23:26:66.20:793,66,0	1/1:6,21:27:66.19:782,66,0	1/1:5,16:21:51.15:606,51,0	1/1:2,11:13:33.10:399,33,0	1/1:2,19:21:63.17:739,63,0	1/1:9,21:30:81.21:937,81,0	1/1:3,13:16:42.13:507,42,0	1/1:1,2:3:4.94:54,5,0
chr10	27958573	.	G	GA	20411.29	PASS	AB=0.917;AC=49;AF=0.875;AN=56;BaseQRankSum=-8.359;DP=528;FS=11.365;HRun=0;HaplotypeScore=58.4316;InbreedingCoeff=0.8405;MQ=86.25;MQ0=0;MQRankSum=-6.413;QD=43.99;ReadPosRankSum=4.118;VQSLOD=4.5518;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,17:17:48.16:766,48,0	1/1:0,7:7:21.07:336,21,0	0/0:23,0:23:66.69:0,67,922	0/0:16,0:16:44.16:0,44,562	1/1:4,14:19:51.16:792,51,0	1/1:2,36:38:99:1665,108,0	1/1:1,20:21:60.20:959,60,0	1/1:1,25:26:75.26:1197,75,0	1/1:2,15:17:48.16:748,48,0	1/1:1,21:22:63.20:975,63,0	1/1:0,17:17:48.16:766,48,0	1/1:1,17:18:54.18:861,54,0	1/1:0,20:20:57.19:903,57,0	1/1:2,11:13:30.10:480,30,0	1/1:1,14:15:42.14:667,42,0	1/1:1,22:23:66.22:1052,66,0	0/0:25,0:25:72.24:0,72,1005	0/1:10,1:10:14.85:15,0,383	1/1:1,19:20:60.19:932,60,0	1/1:1,26:27:75.26:1188,75,0	1/1:0,12:13:36.12:573,36,0	1/1:1,17:18:51.16:792,51,0	1/1:1,16:17:48.16:764,48,0	1/1:1,9:10:30.08:454,30,0	1/1:0,22:22:66.23:1055,66,0	1/1:1,25:26:78.26:1226,78,0	1/1:0,19:19:54.18:861,54,0	1/1:0,8:8:24.08:383,24,0
chr10	27959185	.	AC	A	7330.81	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=4.839;DP=708;FS=18.783;HRun=5;HaplotypeScore=180.7968;InbreedingCoeff=0.9965;MQ=75.62;MQ0=3;MQRankSum=-0.273;QD=12.22;ReadPosRankSum=4.512;VQSLOD=2.3610;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:25:59.35:274,59,0	1/1:9,0:9:24.11:113,24,0	0/0:44,0:29:48.97:0,49,685	0/0:40,0:29:65.42:0,65,616	1/1:25,0:24:66.47:350,66,0	1/1:21,0:21:45.94:230,46,0	1/1:15,0:15:36.81:175,37,0	1/1:24,1:25:57.83:336,58,0	1/1:28,0:28:68.68:420,69,0	1/1:29,0:29:68.07:418,68,0	1/1:29,0:29:76.54:398,77,0	1/1:21,0:21:54.99:236,55,0	1/1:42,0:42:79.83:396,80,0	1/1:25,0:25:62.43:343,62,0	1/1:30,0:30:61.49:341,61,0	1/1:31,0:31:49.85:358,50,0	0/0:18,0:18:48.14:0,48,618	0/0:6,0:6:18.03:0,18,224	1/1:27,2:29:81.82:499,82,0	1/1:29,0:29:61.72:322,62,0	1/1:9,0:9:23.55:113,24,0	1/1:16,0:16:41.11:216,41,0	1/1:27,0:27:54.48:283,54,0	1/1:21,0:21:55.03:237,55,0	1/1:42,0:42:91.58:482,92,0	1/1:28,0:28:68.55:385,69,0	1/1:27,1:28:51.15:243,51,0	1/1:16,0:16:41.18:163,41,0
chr10	27959382	.	C	CA	17138.89	PASS	AC=48;AF=0.889;AN=54;BaseQRankSum=-7.402;DP=654;FS=3.599;HRun=8;HaplotypeScore=55.9089;InbreedingCoeff=0.9750;MQ=65.70;MQ0=0;MQRankSum=1.760;QD=27.64;ReadPosRankSum=1.614;VQSLOD=5.5209;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,19:20:54.16:623,54,0	1/1:0,15:15:39.11:449,39,0	0/0:5,0:5:9.93:0,10,68	./.	1/1:7,22:30:75.01:822,75,0	1/1:4,30:34:84.25:969,84,0	1/1:5,22:27:14.27:672,14,0	1/1:5,21:26:66.19:753,66,0	1/1:7,26:33:50.77:838,51,0	1/1:8,26:34:72.21:831,72,0	1/1:0,28:28:69.20:796,69,0	1/1:4,24:29:69.03:776,69,0	1/1:2,35:37:90.27:1039,90,0	1/1:1,22:23:54.16:623,54,0	1/1:5,21:26:60.18:693,60,0	1/1:6,22:28:57.17:658,57,0	0/0:14,0:14:36.02:0,36,329	0/0:12,0:12:27.01:0,27,247	1/1:4,16:21:50.98:568,51,0	1/1:3,21:25:65.92:699,66,0	1/1:3,14:16:42.12:485,42,0	1/1:2,26:28:72.21:831,72,0	1/1:3,27:30:78.22:892,78,0	1/1:2,12:14:36.11:415,36,0	1/1:1,23:24:66.20:762,66,0	1/1:6,27:33:81.23:925,81,0	1/1:8,19:27:38.68:674,39,0	1/1:0,11:11:30.09:346,30,0
chr10	27959684	.	GA	G	12312.39	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=0.850;DP=548;FS=3.433;HRun=8;HaplotypeScore=55.9112;InbreedingCoeff=0.9823;MQ=78.64;MQ0=0;MQRankSum=-3.242;QD=25.39;ReadPosRankSum=3.457;VQSLOD=5.7061;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,14:14:36.06:348,36,0	1/1:1,10:11:30.05:290,30,0	0/0:19,0:19:39.05:0,39,418	0/0:12,0:12:30.04:0,30,323	1/1:3,17:20:48.07:463,48,0	1/1:3,23:26:60.09:579,60,0	1/1:0,16:16:42.07:406,42,0	1/1:5,20:25:54.07:522,54,0	1/1:1,19:20:57.09:550,57,0	1/1:1,19:20:57.09:550,57,0	1/1:3,28:31:81.13:782,81,0	1/1:1,11:12:33.05:319,33,0	1/1:4,20:24:60.09:579,60,0	1/1:2,17:19:51.08:493,51,0	1/1:1,20:21:60.10:579,60,0	1/1:2,18:20:51.08:493,51,0	0/0:19,0:19:45.14:0,45,544	0/0:13,0:13:36.08:0,36,419	1/1:2,23:25:69.11:666,69,0	1/1:2,31:33:81.12:782,81,0	1/1:0,8:8:21.03:203,21,0	1/1:1,25:26:72.11:695,72,0	1/1:0,19:19:51.08:493,51,0	1/1:1,21:22:60.09:579,60,0	1/1:0,21:21:63.10:608,63,0	1/1:0,16:16:48.08:463,48,0	1/1:1,29:30:81.13:782,81,0	1/1:0,6:6:9.01:87,9,0
chr10	27960726	.	ACTCTCTCTCT	A	1683.66	PASS	AB=1.000;AC=27;AF=0.794;AN=34;BaseQRankSum=4.863;DP=307;FS=23.593;HRun=0;HaplotypeScore=126.2092;InbreedingCoeff=0.4040;MQ=59.86;MQ0=23;MQRankSum=-3.275;QD=11.30;ReadPosRankSum=1.035;VQSLOD=0.5777;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:8,0:8:3.01:76,3,0	1/1:6,0:8:6.02:148,6,0	0/0:13,0:7:2.99:0,3,24	0/0:25,0:20:12.03:0,12,180	./.	./.	./.	./.	1/1:8,1:10:8.92:196,9,0	1/1:8,0:9:3.01:76,3,0	./.	1/1:3,1:7:3.01:83,3,0	1/1:5,2:8:9.03:240,9,0	./.	1/1:5,0:13:3.01:75,3,0	1/1:2,1:5:3.01:75,3,0	0/1:16,0:15:0.35:0,0,384	0/0:6,0:7:9.02:0,9,159	./.	./.	./.	./.	./.	1/1:6,0:8:3.01:82,3,0	1/1:4,0:14:3.01:52,3,0	1/1:10,0:12:9.03:229,9,0	1/1:10,2:15:15.05:379,15,0	1/1:5,0:6:3.01:88,3,0
chr10	27960796	.	TG	T	2517.90	PASS	AB=0.907;AC=40;AF=0.769;AN=52;BaseQRankSum=2.005;DP=490;FS=23.850;HRun=2;HaplotypeScore=130.0421;InbreedingCoeff=0.5326;MQ=41.36;MQ0=62;MQRankSum=-1.352;QD=7.87;ReadPosRankSum=2.358;VQSLOD=-0.2708;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:12,8:13:9.02:101,9,0	1/1:9,0:8:2.69:7,3,0	0/0:54,0:10:27.08:0,27,337	0/0:58,0:12:36.12:0,36,469	0/0:17,0:16:0.43:0,0,1	1/1:14,1:13:5.97:51,6,0	0/1:19,3:19:0:0,0,0	1/1:29,2:27:75.17:823,75,0	1/1:9,0:8:4.56:42,5,0	1/1:15,0:13:23.60:220,24,0	0/1:13,1:13:0:0,0,0	1/1:10,0:10:3.01:38,3,0	1/1:12,0:12:15.26:140,15,0	1/1:14,0:13:2.99:23,3,0	1/1:17,0:16:6.02:75,6,0	1/1:9,0:8:4.26:40,4,0	0/0:18,0:16:6.57:0,7,383	0/0:4,0:4:12.04:0,12,164	1/1:12,0:9:27.05:279,27,0	./.	./.	1/1:12,1:13:3.01:38,3,0	1/1:9,0:9:2.98:21,3,0	1/1:20,1:17:2.33:15,2,0	1/1:24,0:22:4.24:27,4,0	1/1:20,1:20:51.43:477,51,0	1/1:16,1:12:22.08:206,22,0	1/1:6,0:4:3.01:38,3,0
chr10	27960797	.	G	GT	3508.94	PASS	AB=0.666;AC=42;AF=0.808;AN=52;BaseQRankSum=0.131;DP=434;FS=21.049;HRun=1;HaplotypeScore=88.0480;InbreedingCoeff=0.4368;MQ=45.35;MQ0=61;MQRankSum=-1.631;QD=12.23;ReadPosRankSum=2.087;VQSLOD=0.9800;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,10:13:9.02:105,9,0	1/1:0,6:5:0.47:1,0,0	0/0:54,0:10:27.08:0,27,337	0/0:60,0:14:36.12:0,36,471	0/0:1,14:14:0.11:0,0,0	1/1:3,11:12:6.02:92,6,0	1/1:4,15:16:0.47:1,0,0	1/1:7,25:29:75.24:1040,75,0	1/1:1,6:6:3.01:41,3,0	1/1:0,13:11:21.07:308,21,0	0/1:2,9:10:0:0,0,0	1/1:1,7:8:3.01:41,3,0	1/1:0,10:10:11.63:158,12,0	1/1:1,9:9:3.01:37,3,0	1/1:0,10:9:6.02:79,6,0	1/1:2,6:7:3.01:37,3,0	0/1:13,5:16:11.17:11,0,367	0/0:4,0:4:12.04:0,12,160	1/1:5,10:12:30.09:427,30,0	./.	./.	1/1:6,2:9:3.01:38,3,0	1/1:1,5:6:3.01:45,3,0	1/1:4,14:14:2.74:15,3,0	1/1:4,13:15:4.26:51,4,0	1/1:1,16:16:45.15:671,45,0	1/1:2,13:10:20.28:267,20,0	1/1:0,4:3:3.01:42,3,0
chr10	27960802	.	G	GT	658.43	PASS	AB=0.854;AC=7;AF=0.130;AN=54;BaseQRankSum=0.126;DP=427;FS=7.508;HRun=1;HaplotypeScore=92.6977;InbreedingCoeff=0.0209;MQ=50.34;MQ0=54;MQRankSum=-5.449;QD=6.72;ReadPosRankSum=-1.943;VQSLOD=-0.3537;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:14,5:12:12.88:0,13,137	1/1:4,2:5:0.47:1,0,0	0/0:55,0:11:26.98:0,27,319	0/0:63,0:17:48.01:0,48,573	0/0:14,3:16:6.13:0,6,80	0/0:13,1:12:11.34:0,11,94	0/1:18,1:16:0:1,0,0	0/1:20,8:26:99:469,0,341	0/0:7,0:6:2.88:0,3,15	0/0:12,3:13:15.19:0,15,262	0/0:8,2:9:2.80:0,3,20	0/0:7,0:7:3.01:0,3,31	0/0:10,2:12:15.25:0,15,161	0/0:10,1:11:3.54:0,4,75	0/0:8,2:9:6.02:0,6,73	0/0:6,1:6:2.68:0,3,11	0/0:17,0:16:39.13:0,39,538	0/0:4,0:4:12.04:0,12,167	0/1:10,3:11:99:109,0,217	0/0:9,1:10:6.01:0,6,66	./.	0/0:4,1:5:3.01:0,3,40	0/0:5,2:7:5.96:0,6,45	0/0:15,0:12:0.47:0,0,1	0/0:13,3:14:12.04:0,12,155	0/1:15,3:17:99:162,0,304	0/1:12,1:10:20.23:20,0,101	0/0:2,1:2:5.98:0,6,56
chr10	27962817	.	TATAGATAG	T	2553.30	PASS	AB=0.688;AC=27;AF=0.675;AN=40;BaseQRankSum=-0.404;DP=415;FS=19.604;HRun=0;HaplotypeScore=138.1064;InbreedingCoeff=0.5938;MQ=59.62;MQ0=1;MQRankSum=-4.048;QD=11.66;ReadPosRankSum=-0.150;VQSLOD=1.3776;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	1/1:9,1:10:3.01:73,3,0	./.	./.	1/1:27,3:30:11.85:239,12,0	1/1:23,3:26:18.03:384,18,0	1/1:12,0:12:2.67:41,3,0	0/0:25,0:24:3.63:0,4,10	0/0:18,0:23:26.95:0,27,241	1/1:10,7:17:30.10:692,30,0	./.	./.	0/0:15,0:20:17.99:0,18,179	1/1:15,5:20:2.97:20,3,0	1/1:8,2:10:3.01:74,3,0	./.	0/0:11,0:22:21.07:0,21,731	0/0:16,0:16:24.08:0,24,906	1/1:12,1:13:3.01:74,3,0	1/1:10,2:12:12.04:295,12,0	./.	./.	0/0:7,0:8:9.03:0,9,227	1/1:3,0:3:5.98:60,6,0	1/1:13,6:19:23.83:236,24,0	1/1:16,1:17:21.06:435,21,0	0/1:12,1:22:40.73:41,0,266	1/1:7,1:8:3.01:41,3,0
chr10	27962876	.	AATGC	A	95.18	PASS	AB=0.858;AC=9;AF=0.173;AN=52;BaseQRankSum=7.812;DP=355;FS=3.927;HRun=0;HaplotypeScore=101.2756;InbreedingCoeff=-0.2096;MQ=70.21;MQ0=12;MQRankSum=-5.422;QD=0.65;ReadPosRankSum=0.945;VQSLOD=1.9300;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:15.51:0,16,229	0/0:4,0:4:11.25:0,11,115	0/0:37,0:12:7.68:0,8,518	0/1:41,0:15:4.19:4,0,251	0/1:14,5:19:12.43:12,0,276	0/1:16,2:18:9.29:9,0,423	./.	0/0:35,0:35:99:0,105,1402	0/0:8,0:8:4.79:0,5,180	0/1:11,3:14:34.56:35,0,181	0/0:4,0:4:5.77:0,6,72	0/0:4,0:4:6.02:0,6,66	0/0:8,0:8:14.69:0,15,249	0/0:10,1:11:8.97:0,9,90	0/1:5,1:5:15.03:15,0,18	0/0:7,0:7:18.03:0,18,200	0/0:18,0:18:42.11:0,42,1024	0/0:20,0:20:60.12:0,60,1651	0/0:14,0:14:42.10:0,42,660	0/1:6,4:10:25.05:83,0,25	0/0:3,0:3:2.49:0,2,6	./.	0/0:6,0:6:15.05:0,15,199	0/0:4,0:4:9.03:0,9,108	0/1:9,2:11:14.80:15,0,66	0/1:8,3:11:37.41:37,0,221	0/1:16,0:16:12.50:13,0,344	0/0:11,0:11:28.60:0,29,329
chr10	27962880	.	C	CTA	7974.84	PASS	AB=0.789;AC=44;AF=0.815;AN=54;BaseQRankSum=-5.120;DP=367;FS=1.422;HRun=0;HaplotypeScore=66.9777;InbreedingCoeff=0.5854;MQ=69.99;MQ0=12;MQRankSum=-1.483;QD=27.59;ReadPosRankSum=0.342;VQSLOD=5.8827;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:3,7:11:19.81:231,0,20	1/1:2,3:5:9.03:150,9,0	0/0:37,0:12:20.43:0,20,221	0/1:42,0:15:20.85:21,0,68	1/1:8,12:20:45.04:747,45,0	1/1:6,13:19:10.31:710,10,0	./.	1/1:4,32:37:99:1666,102,0	1/1:4,4:8:12.04:174,12,0	1/1:10,4:14:21.07:349,21,0	1/1:2,2:5:6.02:100,6,0	1/1:2,2:4:6.02:100,6,0	1/1:4,4:8:12.04:199,12,0	1/1:7,5:12:12.04:199,12,0	1/1:5,2:6:9.03:137,9,0	1/1:1,6:7:18.06:299,18,0	0/0:18,0:18:33.11:0,33,416	0/0:19,0:19:45.14:0,45,568	1/1:6,10:16:30.10:482,30,0	1/1:7,5:12:21.07:323,21,0	1/1:1,2:3:6.02:100,6,0	0/0:3,0:3:3.01:0,3,38	1/1:1,5:6:15.05:249,15,0	1/1:1,3:4:9.03:150,9,0	1/1:8,3:11:15.05:249,15,0	1/1:5,7:12:30.10:496,30,0	1/1:7,8:15:24.08:395,24,0	1/1:2,9:11:27.09:448,27,0
chr10	27963251	.	CG	C	7960.39	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=4.597;DP=427;FS=5.951;HRun=8;HaplotypeScore=48.9465;InbreedingCoeff=0.9319;MQ=68.24;MQ0=0;MQRankSum=-1.679;QD=22.55;ReadPosRankSum=1.414;VQSLOD=5.3335;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,38:40:90.14:869,90,0	1/1:0,4:4:9.01:87,9,0	0/0:9,0:9:21.04:0,21,236	0/0:14,0:13:24:0,24,240	1/1:3,11:14:27.04:261,27,0	1/1:1,12:13:27.04:261,27,0	1/1:1,24:25:63.10:608,63,0	1/1:1,6:7:17.16:171,17,0	1/1:0,7:7:18.03:174,18,0	1/1:0,16:16:45.06:432,45,0	1/1:1,3:4:9.01:87,9,0	1/1:5,17:22:39.06:377,39,0	1/1:3,20:23:56.95:550,57,0	1/1:3,24:27:38:580,38,0	1/1:1,7:8:21.03:203,21,0	1/1:1,12:13:33.05:319,33,0	0/0:31,0:31:87.27:0,87,1049	0/0:20,0:20:51.14:0,51,603	1/1:1,12:13:36.05:347,36,0	1/1:2,6:8:18.03:174,18,0	1/1:3,24:27:69.11:666,69,0	1/1:1,3:4:9.01:87,9,0	1/1:0,6:6:18.03:174,18,0	1/1:2,24:26:66.10:637,66,0	1/1:1,11:12:15.02:145,15,0	1/1:4,13:17:39.06:377,39,0	1/1:0,9:9:24.04:232,24,0	1/1:1,7:8:15.02:145,15,0
chr10	27963733	.	AT	A	19864.43	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=6.622;DP=612;FS=5.408;HRun=1;HaplotypeScore=65.6259;InbreedingCoeff=0.9965;MQ=63.74;MQ0=1;MQRankSum=0.353;QD=38.13;ReadPosRankSum=1.991;VQSLOD=5.5049;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,25:27:72.24:1002,72,0	1/1:0,10:10:21.07:294,21,0	0/0:13,1:12:33.11:0,33,488	0/0:15,1:14:39.13:0,39,621	1/1:0,25:25:72.24:1007,72,0	1/1:0,24:24:72.24:1007,72,0	1/1:0,27:27:81.27:1133,81,0	1/1:0,28:28:84.28:1168,84,0	1/1:0,17:17:45.15:629,45,0	1/1:0,25:25:75.25:1045,75,0	1/1:0,16:16:42.14:587,42,0	1/1:0,24:24:57.19:795,57,0	1/1:0,28:28:69.23:963,69,0	1/1:0,20:20:54.18:755,54,0	1/1:0,22:22:63.21:881,63,0	1/1:0,26:26:69.23:965,69,0	0/0:39,0:39:99:0,117,1869	0/0:22,0:22:63.17:0,63,948	1/1:0,18:17:48:608,48,0	1/1:0,23:23:57.19:797,57,0	1/1:0,14:14:42.14:587,42,0	1/1:0,16:16:48.16:671,48,0	1/1:0,28:28:69.19:943,69,0	1/1:0,29:29:81.27:1133,81,0	1/1:0,23:22:66.22:923,66,0	1/1:0,13:13:39.13:545,39,0	1/1:0,32:32:84.28:1175,84,0	1/1:0,6:6:18.06:252,18,0
chr10	27963995	.	G	GT	797.14	PASS	AB=0.965;AC=11;AF=0.196;AN=56;BaseQRankSum=-2.632;DP=561;FS=1.093;HRun=12;HaplotypeScore=130.7240;InbreedingCoeff=0.1914;MQ=65.34;MQ0=2;MQRankSum=-0.091;QD=4.01;ReadPosRankSum=0.341;VQSLOD=1.5657;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:7.27:0,7,218	0/0:7,0:7:17.86:0,18,130	0/0:16,1:11:11.67:0,12,55	0/1:21,0:12:20.30:28,0,20	0/0:23,0:25:44.18:0,44,315	0/1:18,0:18:0.03:0,0,97	0/0:21,0:21:21.42:0,21,301	0/0:32,1:33:30.99:0,31,362	0/0:13,0:13:19.72:0,20,126	0/0:20,0:20:44.70:0,45,328	0/0:14,1:15:0.65:0,1,164	0/0:15,0:16:11.56:0,12,105	0/1:23,1:24:25.92:26,0,123	0/0:19,0:19:39.65:0,40,287	0/0:21,0:20:38.55:0,39,274	0/1:23,0:23:4.42:4,0,109	1/1:12,12:24:19.72:428,20,0	1/1:8,23:33:8.28:364,8,0	0/1:20,1:21:73.78:74,0,172	0/0:30,2:32:7.25:0,7,379	0/0:17,0:17:38.73:0,39,280	0/1:11,1:12:4.39:4,0,129	0/0:17,0:17:35.73:0,36,262	0/0:11,0:12:13.03:0,13,146	0/0:17,0:17:32.74:0,33,237	0/1:20,2:22:10.44:10,0,244	0/0:25,0:26:48.31:0,48,338	0/0:7,0:7:14.89:0,15,109
chr10	27964022	.	TG	T	9169.47	PASS	AB=1.000;AC=49;AF=0.875;AN=56;BaseQRankSum=5.388;DP=553;FS=2.339;HRun=1;HaplotypeScore=118.2017;InbreedingCoeff=0.9071;MQ=55.80;MQ0=1;MQRankSum=-3.740;QD=19.06;ReadPosRankSum=-0.909;VQSLOD=4.7993;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:16,10:26:54.92:414,55,0	1/1:4,5:9:23.63:186,24,0	0/0:18,0:12:29.35:0,29,369	0/1:24,0:8:0.47:0,0,138	1/1:10,13:23:55.42:456,55,0	1/1:0,22:22:47.78:411,48,0	1/1:11,9:19:40.40:439,40,0	1/1:20,10:29:76.50:636,77,0	1/1:4,6:10:29.84:243,30,0	1/1:14,9:23:61.36:497,61,0	1/1:5,13:18:45.88:382,46,0	1/1:7,12:19:46.44:415,46,0	1/1:2,25:27:50.56:393,51,0	1/1:7,8:15:35.70:283,36,0	1/1:12,11:22:61.96:534,62,0	1/1:0,19:19:29.50:274,29,0	0/0:25,0:25:38.52:0,39,836	0/0:29,0:28:48.66:0,49,878	1/1:8,7:14:33.68:272,34,0	1/1:16,14:30:74.46:587,74,0	1/1:7,6:13:35.85:289,36,0	1/1:5,4:9:26.33:203,26,0	1/1:9,9:18:41.25:295,41,0	1/1:7,3:10:14.05:114,14,0	1/1:11,9:20:46.84:422,47,0	1/1:18,12:30:83.86:735,84,0	1/1:15,8:23:65.89:568,66,0	1/1:3,2:5:14.97:121,15,0
chr10	27964026	.	TTG	T	11330.64	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=4.884;DP=548;FS=2.370;HRun=0;HaplotypeScore=118.3606;InbreedingCoeff=0.9830;MQ=56.90;MQ0=1;MQRankSum=-3.325;QD=25.01;ReadPosRankSum=-2.097;VQSLOD=5.3947;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:24,1:25:50.26:514,50,0	1/1:11,0:11:27.02:315,27,0	0/0:19,0:13:35.90:0,36,464	0/0:23,0:8:17.93:0,18,189	1/1:23,0:23:52.81:597,53,0	1/1:24,1:25:51.78:600,52,0	1/1:17,0:16:45.86:476,46,0	1/1:28,0:27:62.28:628,62,0	1/1:9,0:9:26.96:309,27,0	1/1:19,2:21:51.76:535,52,0	1/1:16,1:17:43.26:499,43,0	1/1:19,0:19:21.63:461,22,0	1/1:25,1:26:49.89:589,50,0	1/1:14,0:14:32.83:377,33,0	1/1:25,0:24:58.79:675,59,0	1/1:21,0:21:31.35:410,31,0	0/0:24,0:24:47.33:0,47,909	0/0:29,0:28:59.53:0,60,926	1/1:12,1:12:19.86:268,20,0	1/1:32,1:33:77.73:776,78,0	1/1:13,0:13:36.79:357,37,0	1/1:9,0:9:22.45:217,22,0	1/1:16,1:17:38.87:434,39,0	1/1:11,0:11:14.89:173,15,0	1/1:16,1:17:19.56:461,20,0	1/1:32,0:32:83.67:869,84,0	1/1:21,1:22:59.27:634,59,0	1/1:4,1:5:15.01:158,15,0
chr10	27964027	.	TG	T	9030.73	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=6.218;DP=539;FS=1.723;HRun=1;HaplotypeScore=115.9958;InbreedingCoeff=0.9847;MQ=57.13;MQ0=1;MQRankSum=-3.020;QD=20.25;ReadPosRankSum=-2.922;VQSLOD=4.1775;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:18,8:26:52.41:395,52,0	1/1:6,5:11:26.89:216,27,0	0/0:19,0:13:18.10:0,18,361	0/0:22,1:8:17.47:0,17,197	1/1:10,13:23:57.22:458,57,0	1/1:11,14:25:54.12:448,54,0	1/1:10,7:16:44.62:398,45,0	1/1:16,9:24:64.06:538,64,0	1/1:4,5:9:26.88:216,27,0	1/1:12,7:19:54.16:426,54,0	1/1:6,10:16:41.04:348,41,0	1/1:10,10:20:49.11:426,49,0	1/1:13,13:26:50.61:397,51,0	1/1:6,8:14:35.72:280,36,0	1/1:14,10:23:63.82:559,64,0	1/1:12,9:21:32.89:303,33,0	0/0:22,0:22:33.86:0,34,785	0/0:29,0:28:60.98:0,61,782	1/1:5,5:9:26.93:226,27,0	1/1:3,30:33:80.52:622,81,0	1/1:7,6:13:38.84:311,39,0	1/1:6,3:9:26.22:205,26,0	1/1:1,16:17:38.44:288,38,0	1/1:7,3:10:14.93:117,15,0	1/1:11,7:18:43.82:385,44,0	1/1:4,28:32:89.86:781,90,0	1/1:16,7:23:65.90:568,66,0	1/1:4,1:5:14.96:120,15,0
chr10	27966440	.	T	TA	18403.87	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-0.080;DP=592;FS=2.340;HRun=4;HaplotypeScore=70.6830;InbreedingCoeff=0.9987;MQ=81.20;MQ0=0;MQRankSum=-4.745;QD=35.12;ReadPosRankSum=0.759;VQSLOD=5.4376;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,15:16:42.14:574,42,0	1/1:0,7:7:21.07:287,21,0	0/0:17,0:17:36.04:0,36,389	0/0:11,0:12:33.93:0,34,350	1/1:2,20:22:54.18:738,54,0	1/1:0,23:23:66.22:903,66,0	1/1:1,19:20:54.18:738,54,0	1/1:2,42:44:99:1688,126,0	1/1:0,22:22:57.19:779,57,0	1/1:3,26:29:78.23:1036,78,0	1/1:2,25:27:66.18:881,66,0	1/1:3,20:23:60.20:820,60,0	1/1:4,23:27:69.23:943,69,0	1/1:1,16:17:51.17:695,51,0	1/1:1,18:19:48.16:656,48,0	1/1:2,20:22:51.17:697,51,0	0/0:19,0:19:54.14:0,54,602	0/0:20,0:19:57.16:0,57,646	1/1:3,24:27:69.20:911,69,0	1/1:2,22:24:63.13:819,63,0	1/1:1,17:18:48.16:656,48,0	1/1:1,14:15:39.13:533,39,0	1/1:1,22:23:54.09:738,54,0	1/1:2,16:18:39.13:533,39,0	1/1:0,24:24:51.17:697,51,0	1/1:3,17:20:54.18:732,54,0	1/1:1,22:24:60.20:817,60,0	1/1:0,13:13:39.13:533,39,0
chr10	27971965	.	TACACACAC	T	4933.73	PASS	AB=0.781;AC=44;AF=0.846;AN=52;BaseQRankSum=1.874;DP=496;FS=1.662;HRun=0;HaplotypeScore=120.3315;InbreedingCoeff=0.3556;MQ=65.54;MQ0=6;MQRankSum=-1.464;QD=12.72;ReadPosRankSum=0.119;VQSLOD=3.9005;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:13,4:18:21.94:304,22,0	1/1:8,4:13:5.98:76,6,0	0/0:35,0:24:3.01:0,3,65	./.	1/1:15,8:23:4.26:70,4,0	1/1:10,6:16:3.01:75,3,0	0/1:10,3:13:9.94:180,0,10	1/1:13,0:12:2.70:43,3,0	1/1:7,4:13:14.94:289,15,0	1/1:13,5:18:17.74:354,18,0	1/1:12,1:13:9.19:56,9,0	1/1:8,9:17:15.05:335,15,0	1/1:14,2:18:18.04:321,18,0	1/1:7,0:10:9.01:155,9,0	1/1:8,8:15:12.51:297,13,0	1/1:12,16:29:24.08:577,24,0	0/0:11,0:19:9.03:0,9,297	0/0:11,0:11:11.47:0,11,296	./.	1/1:13,6:19:2.90:16,3,0	1/1:30,0:29:5.92:43,6,0	1/1:4,8:12:3.95:77,4,0	1/1:11,0:11:3:25,3,0	1/1:17,0:18:14.99:173,15,0	1/1:9,5:15:5.82:113,6,0	0/1:16,7:24:19.94:420,0,20	1/1:6,11:17:27.05:619,27,0	1/1:9,0:11:20.95:317,21,0
chr10	27973176	.	A	AC	943.80	PASS	AB=0.978;AC=24;AF=0.429;AN=56;BaseQRankSum=2.493;DP=494;FS=2.627;HRun=0;HaplotypeScore=125.2994;InbreedingCoeff=-0.6217;MQ=44.66;MQ0=11;MQRankSum=3.019;QD=2.42;ReadPosRankSum=-5.391;VQSLOD=0.5723;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:18,0:18:56.91:57,0,101	0/1:9,0:9:27.75:51,0,28	0/0:25,0:6:8.91:0,9,71	0/0:14,0:5:7.97:0,8,78	0/1:33,0:33:96.74:97,0,214	0/1:18,0:18:12.26:12,0,94	0/1:16,0:15:39.77:40,0,54	0/1:31,1:31:99:190,0,166	0/1:12,0:11:14.16:14,0,87	0/1:13,0:14:39.61:40,0,79	0/1:16,0:16:42.50:89,0,42	0/1:14,0:14:35.10:35,0,46	0/1:11,0:11:27.77:28,0,45	0/0:14,0:13:6.03:0,6,89	0/1:7,4:11:28.38:38,0,28	0/1:7,0:7:7.39:7,0,56	0/0:33,0:32:50.75:0,51,422	0/0:18,0:18:42.19:0,42,311	0/1:14,0:14:13.25:13,0,169	0/1:31,1:32:99:103,0,181	0/1:3,0:3:9.38:9,0,11	0/1:15,0:15:26.26:26,0,113	0/1:27,1:25:53.03:53,0,127	0/1:9,0:8:5.20:5,0,14	0/1:24,0:24:73.75:100,0,74	0/1:17,1:18:14.98:15,0,151	0/1:27,0:26:22.86:23,0,197	1/1:9,0:8:1.60:53,2,0
chr10	27973182	.	A	AC	120.66	PASS	AB=0.859;AC=12;AF=0.214;AN=56;BaseQRankSum=1.635;DP=513;FS=19.749;HRun=0;HaplotypeScore=135.3930;InbreedingCoeff=-0.2976;MQ=48.81;MQ0=9;MQRankSum=-8.196;QD=0.55;ReadPosRankSum=4.654;VQSLOD=1.0740;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:14,2:16:5.18:0,5,149	0/0:8,2:10:2.13:0,2,116	0/0:24,0:7:4.55:0,5,85	0/0:15,0:6:11.41:0,11,95	0/0:27,7:34:18.52:0,19,314	0/0:17,3:20:2.73:0,3,169	0/1:15,2:16:10.56:11,0,101	0/1:36,2:37:38.83:39,0,447	0/0:11,2:12:22.23:0,22,137	0/1:12,3:15:5.35:5,0,117	0/1:13,3:16:1.10:1,0,158	0/1:10,4:14:8.53:9,0,77	0/1:9,2:11:6.36:6,0,86	0/1:9,4:12:11.18:22,0,11	0/0:9,4:13:16.17:0,16,132	0/1:6,1:7:14.95:15,0,36	0/0:33,0:32:53.73:0,54,437	0/0:19,0:19:50.54:0,51,369	0/1:16,0:16:49.70:50,0,111	0/0:25,6:31:2.09:0,2,268	0/0:5,1:6:4.03:0,4,83	0/0:11,4:15:8.32:0,8,118	0/0:20,6:24:4.55:0,5,125	0/0:6,2:8:9.46:0,9,64	0/1:21,5:26:2.52:3,0,200	0/1:15,3:18:30.78:31,0,78	0/1:24,6:29:60.56:61,0,129	0/0:6,3:8:6.16:0,6,89
chr10	27973187	.	A	AAAAAAC	13392.12	PASS	AB=1.000;AC=49;AF=0.875;AN=56;BaseQRankSum=1.753;DP=402;FS=0.649;HRun=0;HaplotypeScore=110.3511;InbreedingCoeff=0.7393;MQ=62.00;MQ0=6;MQRankSum=-4.824;QD=40.34;ReadPosRankSum=2.397;VQSLOD=4.2999;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,2:10:22.20:272,22,0	1/1:8,2:10:26.90:458,27,0	0/0:26,0:10:19.98:0,20,188	0/1:15,0:8:7.55:8,0,99	1/1:15,7:22:61.79:926,62,0	1/1:9,3:13:32.98:539,33,0	1/1:10,2:11:26.82:372,27,0	1/1:28,2:30:84.19:939,84,0	1/1:6,2:7:20.97:335,21,0	1/1:7,3:10:27.06:453,27,0	1/1:11,2:15:41.48:676,41,0	1/1:6,4:11:27.85:578,28,0	1/1:6,2:8:23.78:486,24,0	1/1:7,4:11:24.06:547,24,0	1/1:8,4:12:27.07:549,27,0	1/1:2,1:3:8.80:119,9,0	0/0:26,0:26:37.87:0,38,407	0/0:17,0:17:0:0,0,262	1/1:11,0:11:28:200,28,0	1/1:14,6:23:63.03:1056,63,0	1/1:6,1:7:17.92:165,18,0	1/1:4,3:10:29.92:557,30,0	1/1:8,6:14:36.11:858,36,0	1/1:4,1:6:15.03:330,15,0	1/1:13,4:21:56.81:950,57,0	1/1:1,3:18:42.43:671,42,0	1/1:14,5:21:53.79:950,54,0	1/1:4,3:7:21.01:400,21,0
chr10	27978174	.	GA	G	10603.18	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=4.805;DP=472;FS=0.000;HRun=8;HaplotypeScore=69.5118;InbreedingCoeff=0.9859;MQ=72.72;MQ0=1;MQRankSum=-1.764;QD=25.13;ReadPosRankSum=3.805;VQSLOD=5.4859;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,10:13:30.03:284,30,0	1/1:2,10:12:30.05:290,30,0	0/0:11,0:11:29.99:0,30,322	0/0:10,0:7:15.03:0,15,156	1/1:0,30:30:84.13:811,84,0	1/1:0,17:17:45.07:435,45,0	1/1:2,10:12:27.04:260,27,0	1/1:5,23:28:66.08:637,66,0	1/1:1,7:8:21.03:203,21,0	1/1:4,21:25:63.10:608,63,0	1/1:3,18:21:54.08:521,54,0	1/1:1,14:15:27.04:261,27,0	1/1:1,18:19:45.07:435,45,0	1/1:2,8:10:21.03:203,21,0	1/1:0,14:14:42.07:406,42,0	1/1:2,7:10:23.07:209,23,0	0/0:16,0:15:42.13:0,42,507	0/0:13,0:13:36.11:0,36,434	1/1:0,19:19:57.09:550,57,0	1/1:1,29:30:87.14:840,87,0	1/1:0,5:5:15.02:145,15,0	1/1:0,11:11:33.05:319,33,0	1/1:1,22:23:60.09:579,60,0	1/1:1,7:8:21.03:203,21,0	1/1:1,25:26:72.12:695,72,0	1/1:2,19:21:57.09:551,57,0	1/1:2,22:24:60.09:580,60,0	1/1:1,20:21:60.10:579,60,0
chr10	27978882	.	TAC	T	17474.93	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=6.591;DP=833;FS=5.134;HRun=0;HaplotypeScore=110.2827;InbreedingCoeff=0.9976;MQ=71.65;MQ0=11;MQRankSum=1.476;QD=26.08;ReadPosRankSum=6.167;VQSLOD=5.6899;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,39:46:99:1270,108,0	1/1:2,8:10:18.06:220,18,0	0/0:48,0:33:54.09:0,54,760	0/0:55,0:34:51.15:0,51,699	1/1:5,26:32:69.05:821,69,0	1/1:3,21:25:66.04:784,66,0	1/1:7,18:26:45.14:550,45,0	1/1:9,24:33:72.20:856,72,0	1/1:6,18:24:51.16:623,51,0	1/1:3,22:24:60.19:731,60,0	1/1:3,20:22:54.17:660,54,0	1/1:6,32:38:84.26:1026,84,0	1/1:2,21:23:54.17:660,54,0	1/1:4,15:18:36.11:440,36,0	1/1:5,21:26:51:623,51,0	1/1:3,23:27:63.03:747,63,0	0/0:30,0:30:78.27:0,78,1260	0/0:30,0:30:87.19:0,87,1306	1/1:4,16:20:42.11:500,42,0	1/1:5,19:24:57.01:674,57,0	1/1:13,49:63:99:1566,110,0	1/1:9,22:30:51.16:623,51,0	1/1:7,19:26:40.18:609,40,0	1/1:9,17:28:50.82:578,51,0	1/1:2,11:13:33.10:403,33,0	1/1:8,27:35:77.42:898,77,0	1/1:3,21:24:63.20:769,63,0	1/1:6,23:29:69.22:843,69,0
chr10	27980264	.	GA	G	8344.01	PASS	AB=0.741;AC=52;AF=0.929;AN=56;BaseQRankSum=-1.961;DP=575;FS=0.000;HRun=12;HaplotypeScore=73.0912;InbreedingCoeff=0.4119;MQ=70.53;MQ0=2;MQRankSum=-0.109;QD=14.72;ReadPosRankSum=2.799;VQSLOD=5.5966;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,20:25:57.71:464,58,0	1/1:2,5:7:11.93:93,12,0	0/1:14,1:15:9.31:9,0,83	0/0:7,0:8:2.96:0,3,19	1/1:7,19:27:46.82:354,47,0	1/1:7,21:28:52.83:417,53,0	1/1:1,17:18:44.83:348,45,0	1/1:12,24:36:67.72:514,68,0	1/1:6,15:22:40.87:308,41,0	0/1:11,22:35:0.17:346,0,0	1/1:6,18:24:50.74:394,51,0	1/1:4,12:16:34.89:259,35,0	1/1:4,19:24:25.37:370,25,0	1/1:3,21:24:50.77:395,51,0	1/1:6,13:19:38.81:302,39,0	1/1:2,26:28:71.71:557,72,0	1/1:4,13:20:43.98:302,44,0	1/1:1,6:7:14.94:116,15,0	1/1:7,9:16:25.88:207,26,0	1/1:4,15:19:14.36:294,14,0	1/1:1,9:10:26.89:209,27,0	1/1:6,10:16:26.88:208,27,0	1/1:5,13:18:35.84:277,36,0	1/1:4,10:15:25.92:192,26,0	1/1:2,21:23:23.35:364,23,0	1/1:7,16:23:47.60:360,48,0	1/1:8,23:32:58.69:447,59,0	1/1:3,13:17:31.91:238,32,0
chr10	27980515	.	G	GTTTT	13872.76	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=3.641;DP=424;FS=125.072;HRun=8;HaplotypeScore=100.2541;InbreedingCoeff=0.9405;MQ=67.83;MQ0=12;MQRankSum=-6.356;QD=40.56;ReadPosRankSum=-1.559;VQSLOD=-0.6144;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:12,3:14:23.95:460,24,0	1/1:4,2:6:12.04:274,12,0	0/0:29,0:17:20.24:0,20,192	0/0:15,0:12:14.68:0,15,161	1/1:13,6:20:51.11:879,51,0	1/1:8,4:11:24.01:401,24,0	1/1:8,2:10:18.06:407,18,0	1/1:14,2:18:33.01:473,33,0	1/1:9,6:15:30.10:697,30,0	1/1:16,6:21:48.08:860,48,0	1/1:10,4:15:44.92:714,45,0	1/1:8,9:17:39.12:844,39,0	1/1:9,4:13:33.09:589,33,0	1/1:7,6:13:23.16:579,23,0	1/1:10,3:13:35.99:520,36,0	1/1:3,8:10:27.09:645,27,0	0/0:18,0:16:45.14:0,45,659	0/0:20,0:20:45.08:0,45,642	1/1:20,1:21:48.14:800,48,0	1/1:12,6:19:48.14:951,48,0	1/1:5,2:6:9.02:173,9,0	1/1:3,1:4:8.94:113,9,0	1/1:8,5:13:27.09:597,27,0	1/1:7,2:9:11.94:170,12,0	1/1:9,11:19:48.16:992,48,0	1/1:14,5:17:42.04:707,42,0	1/1:8,0:16:42.03:475,42,0	1/1:3,5:10:27.09:551,27,0
chr10	27980522	.	TTC	T	878.72	PASS	AB=0.997;AC=17;AF=0.304;AN=56;BaseQRankSum=-3.603;DP=411;FS=2.984;HRun=0;HaplotypeScore=105.2068;InbreedingCoeff=-0.2818;MQ=55.20;MQ0=36;MQRankSum=5.524;QD=3.49;ReadPosRankSum=-5.660;VQSLOD=0.4698;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:13:4.80:0,5,158	0/0:4,0:4:3.99:0,4,41	0/0:23,0:11:18.01:0,18,240	0/1:12,0:9:19.70:20,0,161	0/1:19,0:19:51.97:52,0,158	0/1:9,0:8:34.87:35,0,42	0/0:9,0:8:3.49:0,3,78	0/1:15,0:15:99:128,0,144	0/1:13,0:13:7.61:8,0,8	0/1:22,0:21:45.99:46,0,146	0/0:17,0:17:18.04:0,18,256	0/1:18,0:17:19.62:20,0,71	0/1:12,0:12:25.22:70,0,25	0/0:12,0:12:14.85:0,15,125	0/1:15,0:12:59.23:98,0,59	0/0:10,0:9:17.28:0,17,71	0/0:20,0:16:48.04:0,48,750	0/0:19,0:19:45.10:0,45,730	0/1:25,0:20:52.55:53,0,177	0/1:18,1:18:29.15:96,0,29	0/0:8,0:5:1.35:0,1,6	0/0:6,0:4:10.82:0,11,92	0/0:12,0:12:10.86:0,11,106	0/1:6,0:5:34.29:34,0,54	0/1:19,0:18:5.24:5,0,110	0/1:18,0:15:55.50:56,0,165	1/1:12,4:16:39.97:310,40,0	0/1:13,0:10:6.19:6,0,45
chr10	27980523	.	TC	T	4525.28	PASS	AB=0.907;AC=30;AF=0.536;AN=56;BaseQRankSum=4.100;DP=417;FS=32.366;HRun=1;HaplotypeScore=86.4392;InbreedingCoeff=-0.4173;MQ=54.59;MQ0=44;MQRankSum=-0.269;QD=12.82;ReadPosRankSum=1.999;VQSLOD=2.0742;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:18,1:13:72.62:73,0,96	0/1:3,1:4:22.50:73,0,23	0/0:23,0:11:2:0,2,166	0/1:12,0:9:6.90:7,0,117	0/1:17,3:19:65.81:315,0,66	0/1:9,0:8:1.84:147,0,2	0/1:8,1:8:33.56:98,0,34	0/1:14,1:15:99:149,0,114	1/1:6,7:13:30.02:295,30,0	0/1:18,4:21:69.99:331,0,70	0/1:17,1:17:99:139,0,139	0/1:15,2:16:2.43:297,0,2	1/1:10,3:12:10.19:295,10,0	0/1:11,1:12:31.27:161,0,31	0/1:11,4:12:27.04:218,0,27	1/1:11,0:9:10.04:183,10,0	0/0:20,0:16:48.03:0,48,595	0/0:21,0:19:45.09:0,45,577	0/1:16,9:20:99:318,0,141	1/1:14,5:18:27.51:385,28,0	1/1:8,0:5:8.99:77,9,0	0/1:6,0:4:13.17:13,0,48	0/1:10,1:11:31.25:148,0,31	0/1:6,1:6:25.95:64,0,26	0/1:18,3:18:19.98:331,0,20	0/1:17,1:15:90.27:236,0,90	0/1:15,1:15:20.83:71,0,21	0/1:13,0:10:18.67:102,0,19
chr10	27980529	.	CT	C	4950.99	PASS	AB=0.746;AC=47;AF=0.839;AN=56;BaseQRankSum=4.533;DP=388;FS=51.605;HRun=9;HaplotypeScore=81.1043;InbreedingCoeff=0.5609;MQ=47.56;MQ0=49;MQRankSum=-5.081;QD=15.19;ReadPosRankSum=2.294;VQSLOD=1.5182;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,11:12:26.51:244,27,0	1/1:2,2:4:5.51:54,6,0	0/0:22,0:10:6.27:0,6,44	0/1:9,0:6:3.66:4,0,61	0/1:6,13:18:9.54:210,0,10	1/1:2,5:6:15:136,15,0	1/1:4,5:8:15.01:137,15,0	1/1:1,10:11:23.70:219,24,0	1/1:5,6:11:20.12:178,20,0	1/1:6,14:19:38.85:354,39,0	1/1:2,15:16:44.31:407,44,0	1/1:5,11:15:24.11:284,24,0	1/1:4,6:9:5.63:124,6,0	1/1:4,9:12:21.78:237,22,0	1/1:5,6:8:12.81:156,13,0	1/1:2,10:10:30.01:270,30,0	0/0:21,0:17:45.13:0,45,517	0/0:19,0:17:33.10:0,33,381	1/1:17,6:18:12.69:172,13,0	1/1:7,10:16:24.51:240,25,0	1/1:6,2:4:6:55,6,0	1/1:2,4:4:12.01:110,12,0	1/1:1,11:12:33.02:297,33,0	0/1:4,5:6:5.27:22,0,5	1/1:5,16:18:42.01:378,42,0	1/1:5,9:11:26.09:250,26,0	1/1:6,9:14:20.28:212,20,0	1/1:4,9:10:10.36:202,10,0
chr10	27981018	.	TC	T	1933.23	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.074;DP=628;FS=1.822;HRun=1;HaplotypeScore=65.7009;InbreedingCoeff=0.9979;MQ=68.40;MQ0=0;MQRankSum=3.630;QD=32.22;ReadPosRankSum=2.764;VQSLOD=3.4760;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:93.28:0,93,1426	0/0:11,0:11:33.11:0,33,527	0/0:11,0:11:30.07:0,30,398	0/0:10,0:10:26.92:0,27,383	0/0:33,0:33:93.30:0,93,1449	0/0:31,0:31:93.32:0,93,1463	0/0:21,0:21:54.18:0,54,859	0/0:26,0:26:78.27:0,78,1246	0/0:19,0:19:47.59:0,48,764	0/0:28,0:28:81.27:0,81,1267	0/0:17,0:17:45.15:0,45,697	0/0:30,0:30:75.10:0,75,1163	0/0:25,0:25:72.25:0,72,1139	0/0:24,0:24:66.21:0,66,1028	0/0:24,0:24:63.20:0,63,980	0/0:14,0:14:42.14:0,42,661	1/1:1,26:27:60.20:839,60,0	1/1:0,33:33:90.21:1216,90,0	0/0:14,0:14:39.11:0,39,578	0/0:17,0:17:51.13:0,51,786	0/0:13,0:13:39.13:0,39,623	0/0:29,0:29:84.20:0,84,1297	0/0:31,0:31:93.15:0,93,1423	0/0:20,0:20:57.18:0,57,885	0/0:27,0:27:78.21:0,78,1207	0/0:25,0:25:75.24:0,75,1175	0/0:26,0:26:75.24:0,75,1159	0/0:8,0:8:24.08:0,24,383
chr10	27982500	.	C	CATATATAT	963.84	PASS	AB=0.839;AC=18;AF=0.818;AN=22;BaseQRankSum=-0.502;DP=194;FS=2.291;HRun=0;HaplotypeScore=74.7053;InbreedingCoeff=0.0800;MQ=80.63;MQ0=14;MQRankSum=-2.419;QD=8.31;ReadPosRankSum=-0.593;VQSLOD=1.7783;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:3,0:3:3.01:41,3,0	./.	0/1:37,0:12:0.22:0,0,0	0/0:75,0:22:2.11:0,2,11	./.	./.	./.	1/1:26,0:25:33.07:452,33,0	./.	./.	./.	./.	./.	1/1:1,0:1:3:25,3,0	./.	./.	0/1:10,5:18:22.37:116,0,22	1/1:8,4:11:3.01:125,3,0	1/1:2,0:2:3.01:62,3,0	./.	./.	./.	./.	./.	./.	1/1:3,0:3:3.01:61,3,0	1/1:4,0:4:3.01:48,3,0	1/1:9,0:8:6.02:118,6,0
chr10	27984012	.	C	CAG	5597.12	PASS	AC=46;AF=0.852;AN=54;BaseQRankSum=1.478;DP=462;FS=18.371;HRun=0;HaplotypeScore=111.0841;InbreedingCoeff=0.8339;MQ=63.19;MQ0=12;MQRankSum=-2.437;QD=16.37;ReadPosRankSum=0.117;VQSLOD=3.7050;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:19:29.93:262,30,0	1/1:7,0:7:17.95:180,18,0	0/0:35,0:13:30.03:0,30,292	0/0:24,0:12:23.09:0,23,231	1/1:21,0:21:26.86:238,27,0	1/1:17,0:17:3.01:36,3,0	1/1:18,0:16:35.94:368,36,0	1/1:17,0:17:41.87:370,42,0	1/1:19,0:19:2.97:40,3,0	1/1:18,0:18:48.01:461,48,0	1/1:14,0:13:32.96:274,33,0	1/1:15,0:15:8.99:109,9,0	1/1:9,0:9:27:304,27,0	1/1:7,0:7:17.95:157,18,0	1/1:18,0:18:35.82:289,36,0	1/1:15,1:16:29.96:283,30,0	0/0:24,0:24:68.66:0,69,733	0/0:17,0:17:17.91:0,18,145	1/1:17,0:17:38.94:376,39,0	1/1:0,19:19:2.95:19,3,0	1/1:14,0:14:26.85:212,27,0	1/1:12,0:12:23.99:225,24,0	1/1:15,0:13:32.94:291,33,0	./.	1/1:10,0:10:12:104,12,0	1/1:20,0:20:54.39:523,54,0	1/1:13,0:13:32.98:349,33,0	1/1:5,0:5:14.93:127,15,0
chr10	27984013	.	A	AGAGTGTGT	9116.96	PASS	AB=0.512;AC=47;AF=0.839;AN=56;BaseQRankSum=1.177;DP=593;FS=28.150;HRun=0;HaplotypeScore=181.5653;InbreedingCoeff=0.8081;MQ=55.59;MQ0=13;MQRankSum=-3.984;QD=18.46;ReadPosRankSum=-1.421;VQSLOD=2.7171;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:24:29.87:262,30,0	1/1:6,0:6:17.96:288,18,0	0/0:34,0:12:30.03:0,30,292	0/0:23,0:11:23.11:0,23,234	1/1:31,0:31:26.39:261,26,0	1/1:7,0:23:3.01:54,3,0	1/1:21,0:19:36.14:369,36,0	1/1:18,0:18:45.06:579,45,0	1/1:7,16:25:2.83:126,3,0	1/1:27,0:26:68.95:889,69,0	1/1:21,0:20:32.96:274,33,0	1/1:4,13:16:8.77:272,9,0	1/1:20,0:21:42.34:824,42,0	1/1:13,0:13:17.16:208,17,0	1/1:23,0:22:35.82:289,36,0	1/1:26,0:24:35.47:591,35,0	0/0:25,0:25:68.29:0,68,1362	0/0:6,0:17:17.90:0,18,185	1/1:20,0:20:45.43:661,45,0	1/1:23,0:23:2.96:19,3,0	1/1:15,0:14:26.85:212,27,0	1/1:20,0:19:23.99:272,24,0	1/1:21,0:19:32.94:328,33,0	0/1:1,0:21:0:0,0,0	1/1:12,0:12:12:104,12,0	1/1:29,0:27:75.36:1000,75,0	1/1:20,0:20:45.03:776,45,0	1/1:13,0:13:35.48:460,35,0
chr10	27984083	.	A	AGAGAGAGT	3998.47	PASS	AB=0.685;AC=32;AF=0.593;AN=54;BaseQRankSum=0.313;DP=540;FS=2.799;HRun=0;HaplotypeScore=135.8263;InbreedingCoeff=0.3794;MQ=57.76;MQ0=17;MQRankSum=2.356;QD=11.42;ReadPosRankSum=0.242;VQSLOD=2.7084;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:10,16:25:6.97:87,0,7	1/1:4,0:4:2.04:129,2,0	0/0:27,0:15:20.76:0,21,262	0/0:33,0:13:29.14:0,29,226	0/1:7,2:24:0:0,0,1	1/1:19,0:18:29.97:336,30,0	1/1:19,0:19:29.66:287,30,0	0/1:19,0:19:33.03:249,0,33	1/1:15,1:17:23.79:296,24,0	0/1:8,1:17:31.12:325,0,31	1/1:7,0:18:5.92:39,6,0	1/1:9,1:9:17.71:132,18,0	0/1:11,15:29:14.09:104,0,14	0/0:8,0:16:0:0,0,0	1/1:7,7:12:3.01:57,3,0	0/0:8,0:15:8.50:0,8,49	0/0:32,0:31:63.02:0,63,824	0/0:19,0:18:33.02:0,33,494	1/1:6,0:16:5.09:205,5,0	1/1:21,0:21:38.59:436,39,0	0/0:4,0:10:2.74:0,3,12	./.	0/0:5,0:19:0.24:0,0,1	1/1:16,0:15:11.98:112,12,0	1/1:17,0:16:25.94:302,26,0	1/1:16,0:21:1.93:324,2,0	0/1:10,0:20:19.35:81,0,19	1/1:4,8:13:12.04:497,12,0
chr10	27984397	.	T	TTCC	1357.95	PASS	AB=0.802;AC=23;AF=0.523;AN=44;BaseQRankSum=4.203;DP=373;FS=11.374;HRun=0;HaplotypeScore=91.1247;InbreedingCoeff=0.0130;MQ=51.74;MQ0=17;MQRankSum=-4.340;QD=5.68;ReadPosRankSum=-0.931;VQSLOD=1.4200;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:10,0:6:6:56,6,0	0/1:5,0:5:5.24:73,0,5	0/0:27,0:10:24.76:0,25,299	0/0:35,0:16:24.96:0,25,419	./.	0/1:6,0:5:6.08:56,0,6	0/1:22,30:50:20.02:114,0,20	0/1:10,0:10:17.74:237,0,18	0/1:9,12:20:47.52:115,0,48	./.	./.	0/1:8,12:20:1.67:50,0,2	0/0:13,9:21:15.33:0,15,109	1/1:6,11:19:9.47:111,9,0	1/1:7,0:7:17.06:177,17,0	0/1:7,6:12:12.23:12,0,13	0/0:23,0:23:57.12:0,57,937	0/0:19,0:19:51.17:0,51,890	1/1:2,7:7:18.39:206,18,0	./.	1/1:12,0:8:2.94:18,3,0	./.	./.	0/1:13,12:28:5.36:5,0,57	1/1:2,0:1:2.94:18,3,0	0/1:6,0:6:49.93:77,0,50	0/1:5,9:14:70.06:89,0,70	0/1:4,0:4:26.29:94,0,26
chr10	27984416	.	GCTT	G	835.35	PASS	AB=0.884;AC=26;AF=0.591;AN=44;BaseQRankSum=2.761;DP=395;FS=4.831;HRun=0;HaplotypeScore=98.9850;InbreedingCoeff=0.3579;MQ=36.42;MQ0=30;MQRankSum=-1.935;QD=3.24;ReadPosRankSum=-3.341;VQSLOD=0.2404;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:4:0.46:0,0,1	1/1:4,0:4:3.12:20,3,0	0/0:30,0:5:8.42:0,8,55	0/0:43,0:8:17.70:0,18,107	./.	1/1:9,0:5:0.89:2,1,0	1/1:54,0:51:6.72:101,7,0	0/1:3,4:7:1.61:69,0,2	1/1:22,0:21:3.83:107,4,0	./.	./.	1/1:22,0:22:14.66:102,15,0	1/1:24,0:23:18.97:169,19,0	1/1:21,0:21:9.55:166,10,0	1/1:5,0:5:5.82:34,6,0	0/1:13,0:10:2.07:48,0,2	0/0:24,0:24:41.70:0,42,423	0/0:18,0:18:37.68:0,38,331	1/1:8,0:5:2.05:20,2,0	./.	0/1:14,0:10:0:0,0,0	./.	./.	0/1:32,0:32:29.15:36,0,29	0/0:3,0:2:0.89:0,1,2	0/1:4,4:6:1.31:1,0,8	0/1:12,0:11:21.28:37,0,21	1/1:3,0:3:8.90:62,9,0
chr10	27984419	.	T	TCTG	861.57	PASS	AB=0.914;AC=34;AF=0.895;AN=38;BaseQRankSum=-0.100;DP=397;FS=10.747;HRun=0;HaplotypeScore=98.5672;InbreedingCoeff=0.2424;MQ=36.50;MQ0=34;MQRankSum=-2.129;QD=2.62;ReadPosRankSum=-0.957;VQSLOD=0.9279;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:11,0:4:0:0,0,0	1/1:5,0:4:0.47:1,0,0	./.	0/1:42,0:8:0:0,0,0	./.	./.	1/1:54,0:51:10.23:71,10,0	1/1:6,0:6:0.47:1,0,0	1/1:22,0:21:13.33:90,13,0	1/1:1,0:1:2.68:11,3,0	./.	1/1:21,0:21:4.85:47,5,0	1/1:25,0:24:12.08:85,12,0	1/1:20,0:20:3.98:17,4,0	1/1:4,0:4:2.04:6,2,0	1/1:13,0:10:2.45:24,2,0	0/1:12,13:25:52.98:104,0,53	1/1:8,10:18:21.07:407,21,0	1/1:8,0:6:1.25:3,1,0	./.	./.	./.	./.	1/1:30,0:30:0.26:19,0,0	./.	1/1:9,0:6:0.47:1,0,0	1/1:12,0:11:10.32:55,10,0	0/1:3,0:3:0:0,0,0
chr10	27985065	.	C	CA	23676.81	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-11.417;DP=609;FS=9.005;HRun=0;HaplotypeScore=56.6876;InbreedingCoeff=0.9827;MQ=94.29;MQ0=0;MQRankSum=-9.842;QD=44.26;ReadPosRankSum=5.734;VQSLOD=4.4757;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,18:18:51.17:814,51,0	1/1:0,5:5:9.01:144,9,0	0/0:25,0:25:71.82:0,72,961	0/0:30,0:29:84.52:0,85,1089	1/1:0,28:28:78.27:1236,78,0	1/1:0,22:22:60.20:959,60,0	1/1:0,17:17:51.17:815,51,0	1/1:0,31:31:90.29:1408,90,0	1/1:0,16:16:45.15:719,45,0	1/1:0,44:44:99:2063,132,0	1/1:0,19:19:57.11:868,57,0	1/1:0,13:13:36.12:575,36,0	1/1:3,14:17:42.14:671,42,0	1/1:0,24:24:57.19:911,57,0	1/1:1,19:20:51.17:815,51,0	1/1:0,20:20:60.20:959,60,0	0/0:12,0:12:33:0,33,415	0/0:7,0:7:21.07:0,21,294	1/1:1,19:20:57.16:867,57,0	1/1:0,35:35:99:1582,99,0	1/1:1,25:26:72.25:1151,72,0	1/1:0,22:22:63.21:1007,63,0	1/1:2,17:19:45.15:719,45,0	1/1:0,17:17:51.17:815,51,0	1/1:0,18:17:51.17:815,51,0	1/1:0,29:29:87.28:1368,87,0	1/1:1,32:33:90.31:1434,90,0	1/1:0,22:22:60.20:959,60,0
chr10	27986040	.	CA	C	13779.17	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=2.618;DP=476;FS=2.654;HRun=1;HaplotypeScore=53.3518;InbreedingCoeff=0.9732;MQ=98.88;MQ0=0;MQRankSum=-7.355;QD=35.79;ReadPosRankSum=3.478;VQSLOD=4.9991;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,25:25:60.20:835,60,0	1/1:0,6:6:8.83:125,9,0	0/0:19,0:19:57.16:0,57,845	0/0:29,0:30:68.32:0,68,966	1/1:0,20:20:57.19:789,57,0	1/1:0,12:12:36.12:501,36,0	1/1:0,18:18:51.17:707,51,0	1/1:0,27:27:72.19:929,72,0	1/1:0,11:11:30.10:413,30,0	1/1:0,13:13:38.95:493,39,0	1/1:0,9:9:27.09:376,27,0	1/1:0,16:16:45.15:623,45,0	1/1:0,12:12:33.11:458,33,0	1/1:0,17:17:48.16:667,48,0	1/1:0,25:25:60.20:833,60,0	1/1:0,16:16:41.99:585,42,0	0/0:19,0:19:57.18:0,57,883	0/0:23,0:23:69.20:0,69,1054	1/1:1,19:20:57.17:752,57,0	1/1:0,21:21:53.68:642,54,0	1/1:0,16:16:39.13:539,39,0	1/1:0,4:4:12.04:162,12,0	1/1:0,12:12:32.90:459,33,0	1/1:0,19:19:45.15:619,45,0	1/1:0,18:18:42.14:584,42,0	1/1:0,15:15:44.98:564,45,0	1/1:0,24:24:60.20:834,60,0	1/1:0,9:9:21.07:292,21,0
chr10	27986945	.	TACACAC	T	9515.73	PASS	AB=0.875;AC=42;AF=0.778;AN=54;BaseQRankSum=-0.267;DP=703;FS=7.684;HRun=0;HaplotypeScore=186.6976;InbreedingCoeff=0.2648;MQ=49.88;MQ0=16;MQRankSum=-2.021;QD=15.86;ReadPosRankSum=1.900;VQSLOD=3.2894;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:30,4:31:40.82:515,41,0	1/1:6,6:12:30.10:603,30,0	./.	0/0:28,0:14:8.85:0,9,58	1/1:15,11:25:31.32:518,31,0	1/1:18,7:24:1:562,1,0	1/1:16,4:17:15.05:292,15,0	0/1:30,0:28:19.93:113,0,20	1/1:19,2:20:15.04:263,15,0	1/1:30,4:30:31.16:508,31,0	1/1:17,5:22:21.07:303,21,0	1/1:24,4:28:15.09:469,15,0	1/1:14,2:16:16.13:257,16,0	0/1:17,3:19:24.41:275,0,24	1/1:21,7:26:41.98:610,42,0	1/1:15,4:19:27.04:438,27,0	0/0:27,0:30:68.51:0,69,1811	0/0:24,0:23:56.72:0,57,1023	0/1:16,2:14:62.32:156,0,62	1/1:21,9:29:46.28:642,46,0	1/1:37,0:36:15.16:156,15,0	1/1:19,6:24:8.76:360,9,0	1/1:20,5:25:32.97:391,33,0	1/1:30,1:32:0.68:100,1,0	0/1:20,11:31:27.27:803,0,27	1/1:36,3:35:32.19:807,32,0	0/1:10,3:13:33.83:272,0,34	0/1:12,1:12:23.63:104,0,24
chr10	27986977	.	CAA	C	1705.40	PASS	AB=0.995;AC=26;AF=0.481;AN=54;BaseQRankSum=-4.130;DP=841;FS=149.731;HRun=3;HaplotypeScore=245.7280;InbreedingCoeff=-0.7868;MQ=32.90;MQ0=56;MQRankSum=4.082;QD=2.16;ReadPosRankSum=-2.013;VQSLOD=-0.1266;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:40,0:33:44.83:87,0,45	0/1:19,0:18:53.82:99,0,54	./.	0/0:10,0:2:5.22:0,5,35	0/1:36,0:30:81.48:81,0,140	0/1:22,2:23:14.79:98,0,15	0/1:30,0:25:17.72:18,0,142	0/1:76,0:38:61.01:61,0,356	0/1:21,0:17:21.59:22,0,29	0/1:53,0:40:99:180,0,130	0/1:27,0:23:61.37:61,0,71	0/1:27,0:24:21.27:50,0,21	0/1:22,0:18:36.05:36,0,49	0/1:21,0:18:26.16:79,0,26	0/1:38,1:32:70.59:71,0,76	1/1:20,0:18:3.52:72,4,0	0/0:39,0:37:53.46:0,53,1168	0/1:33,0:32:21.26:21,0,742	0/1:28,0:14:21.23:21,0,120	0/1:31,0:24:90.18:107,0,90	0/1:48,0:42:15.78:16,0,84	0/1:26,0:24:26.96:27,0,99	0/1:22,0:22:50.98:103,0,51	0/1:28,0:27:32.93:45,0,33	0/1:37,0:36:99:214,0,174	0/1:51,1:41:99:203,0,222	0/1:20,0:16:79.68:80,0,104	0/1:9,0:8:2.24:2,0,21
chr10	27987003	.	A	AAAC	7795.35	PASS	AB=0.810;AC=26;AF=0.464;AN=56;BaseQRankSum=-1.045;DP=918;FS=2.939;HRun=0;HaplotypeScore=248.8130;InbreedingCoeff=-0.5420;MQ=34.38;MQ0=87;MQRankSum=2.104;QD=9.45;ReadPosRankSum=-1.435;VQSLOD=4.3025;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:26,9:27:98.87:197,0,99	0/1:17,2:18:84.07:190,0,84	0/0:12,0:3:8.88:0,9,78	0/0:12,0:2:3.01:0,3,36	0/1:32,7:35:99:218,0,189	0/1:17,6:21:38.51:326,0,39	0/1:26,4:24:99:101,0,113	0/1:88,0:44:99:170,0,229	1/1:21,7:23:23.50:514,24,0	0/1:41,12:42:99:956,0,124	0/1:20,8:24:72.88:241,0,73	0/1:24,7:27:2.31:440,0,2	0/1:17,10:25:47.68:535,0,48	0/1:24,4:26:4.24:437,0,4	0/1:26,10:28:99:487,0,110	0/1:20,5:22:25.29:370,0,25	0/0:38,0:37:99:0,102,1657	0/0:31,0:30:81.27:0,81,1338	0/1:43,3:15:99:148,0,140	0/1:23,8:25:99:161,0,149	0/1:31,2:46:1.50:2,0,76	0/1:21,7:29:99:311,0,132	0/1:12,4:16:19.13:232,0,19	1/1:18,4:24:7.52:376,8,0	0/1:19,9:28:99:275,0,236	0/1:37,9:36:99:423,0,239	0/1:12,10:19:74.63:579,0,75	0/1:12,1:13:71.24:110,0,71
chr10	27987095	.	TAC	T	4190.99	PASS	AB=0.965;AC=25;AF=0.446;AN=56;BaseQRankSum=8.870;DP=1014;FS=1.079;HRun=0;HaplotypeScore=385.5191;InbreedingCoeff=-0.6292;MQ=38.70;MQ0=46;MQRankSum=-3.717;QD=4.75;ReadPosRankSum=4.665;VQSLOD=1.1996;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:35,1:31:7.84:8,0,117	0/1:9,2:10:31.63:99,0,32	0/0:23,0:4:5.99:0,6,57	0/0:35,1:6:12.03:0,12,172	0/1:30,3:33:99:238,0,204	0/1:24,0:23:99:128,0,215	0/1:44,0:39:15.24:15,0,325	0/1:52,0:23:1.40:1,0,489	0/1:38,0:37:87.77:88,0,194	0/1:49,1:46:99:398,0,671	0/1:28,3:30:4.88:225,0,5	0/1:30,2:32:98.54:126,0,99	0/1:34,0:32:54.72:55,0,615	0/1:51,2:52:99:249,0,304	0/1:41,3:39:90.83:311,0,91	0/1:40,1:40:71.03:322,0,71	0/0:29,0:28:66.69:0,67,1104	0/0:43,0:43:99:0,102,1579	0/1:34,0:17:5.63:6,0,364	0/1:34,0:34:99:134,0,317	0/1:59,3:57:79.52:80,0,347	0/1:40,1:40:99:400,0,185	0/1:36,2:37:99:378,0,151	1/1:15,2:15:4.99:20,5,0	0/1:26,0:26:24.22:282,0,24	0/1:52,1:49:99:149,0,1129	0/1:41,1:42:99:449,0,252	0/1:10,1:11:29.33:29,0,86
chr10	27987101	.	C	CAT	12264.42	PASS	AB=0.794;AC=27;AF=0.482;AN=56;BaseQRankSum=4.064;DP=1000;FS=2.775;HRun=0;HaplotypeScore=363.0384;InbreedingCoeff=-0.5922;MQ=36.43;MQ0=52;MQRankSum=-3.509;QD=13.81;ReadPosRankSum=-0.793;VQSLOD=3.9822;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:29,4:27:43.75:44,0,114	0/1:9,4:12:38.77:343,0,39	0/0:15,0:3:5.98:0,6,50	0/0:27,0:4:12.04:0,12,179	0/1:20,12:32:99:713,0,172	0/1:15,7:21:99:368,0,194	0/1:33,7:35:12.51:13,0,309	0/1:63,1:27:28.35:28,0,516	0/1:26,11:37:99:274,0,178	0/1:30,17:44:99:975,0,609	1/1:16,13:28:5.29:834,5,0	0/1:23,9:32:83.18:320,0,83	0/1:26,8:32:99:285,0,463	0/1:35,17:49:99:727,0,231	0/1:28,16:38:67.96:1009,0,68	0/1:19,20:38:40.99:881,0,41	0/0:27,0:26:71.23:0,71,1026	0/0:42,0:42:87.72:0,88,1431	0/1:35,0:18:99:121,0,326	0/1:25,9:34:99:432,0,250	0/1:54,5:57:99:230,0,305	0/1:26,16:41:99:934,0,160	0/1:25,15:39:99:859,0,114	1/1:14,2:13:2.78:58,3,0	1/1:13,16:29:1.39:918,1,0	0/1:48,9:50:99:507,0,1033	0/1:22,20:42:99:1162,0,187	0/1:9,3:12:55.28:230,0,55
chr10	27987127	.	CAT	C	201.81	PASS	AB=0.895;AC=4;AF=0.071;AN=56;BaseQRankSum=4.089;DP=948;FS=2.316;HRun=0;HaplotypeScore=398.3034;InbreedingCoeff=0.2123;MQ=33.72;MQ0=51;MQRankSum=-3.897;QD=1.92;ReadPosRankSum=-6.638;VQSLOD=0.1225;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:27:9.41:0,9,481	0/0:10,1:11:16.61:0,17,262	1/1:14,0:3:4.07:12,4,0	0/0:27,0:2:2.24:0,2,56	0/0:30,1:31:9.74:0,10,571	0/0:23,1:23:15.44:0,15,529	0/0:36,0:31:7.16:0,7,366	0/0:81,0:40:72.44:0,72,1147	0/0:30,1:29:38.37:0,38,773	0/1:49,4:48:99:153,0,1218	0/0:25,0:23:16.78:0,17,392	0/0:23,3:26:17.91:0,18,445	0/0:33,0:30:57.87:0,58,1133	0/0:43,6:44:56.13:0,56,1095	0/0:33,2:29:51.17:0,51,777	0/0:32,3:34:28.45:0,28,677	0/0:28,0:27:61.57:0,62,1144	0/0:40,0:39:48.13:0,48,1132	0/0:29,0:14:31.51:0,32,418	0/0:35,2:37:63.82:0,64,1096	0/0:55,0:51:41.07:0,41,783	0/0:43,2:44:64.49:0,64,1156	0/0:35,1:35:38.18:0,38,772	0/0:13,0:11:1.83:0,2,113	0/0:24,4:28:24.33:0,24,550	0/0:50,1:45:55.51:0,56,1643	0/1:31,6:37:99:135,0,646	0/0:7,0:7:15.03:0,15,257
chr10	27987147	.	C	CACCT	6073.21	PASS	AB=0.996;AC=32;AF=0.571;AN=56;BaseQRankSum=4.412;DP=938;FS=20.128;HRun=0;HaplotypeScore=384.2858;InbreedingCoeff=-0.2338;MQ=32.91;MQ0=47;MQRankSum=-4.193;QD=7.61;ReadPosRankSum=8.566;VQSLOD=1.3155;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:26:65.15:173,0,65	0/1:13,0:13:59.49:104,0,59	0/0:33,0:4:9:0,9,174	0/0:45,0:5:15.05:0,15,267	1/1:36,0:35:21.07:437,21,0	0/1:24,0:23:24.29:237,0,24	0/1:30,0:26:80.14:80,0,155	0/1:76,0:37:99:178,0,466	1/1:34,1:33:11.89:409,12,0	0/1:50,0:46:99:223,0,321	0/1:19,0:19:15.26:112,0,15	1/1:31,0:30:7.02:169,7,0	0/1:36,0:33:15.95:408,0,16	0/1:52,1:50:61.79:556,0,62	0/1:35,0:33:29.66:347,0,30	1/1:34,0:34:11.17:332,11,0	0/0:28,0:27:52.49:0,52,1172	0/0:34,0:33:75.67:0,76,1352	0/1:30,0:17:99:169,0,149	0/1:43,0:43:87.85:461,0,88	0/1:47,2:45:58.01:58,0,236	0/1:37,0:36:72.97:400,0,73	1/1:31,0:30:46.25:471,46,0	1/1:11,0:9:2.92:32,3,0	1/1:23,0:23:22.51:317,23,0	0/1:42,0:38:99:238,0,171	0/1:25,0:25:99:145,0,115	1/1:8,0:8:3.30:17,3,0
chr10	27987155	.	T	TACAC	18566.05	PASS	AB=0.923;AC=47;AF=0.839;AN=56;BaseQRankSum=4.149;DP=881;FS=22.175;HRun=0;HaplotypeScore=315.7227;InbreedingCoeff=0.7987;MQ=33.08;MQ0=43;MQRankSum=-4.143;QD=25.02;ReadPosRankSum=-0.302;VQSLOD=3.5841;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:28,2:29:28.81:548,29,0	1/1:12,0:12:30.05:458,30,0	0/0:33,0:4:11.78:0,12,171	0/0:44,0:5:9.03:0,9,156	1/1:29,3:31:47.16:1039,47,0	1/1:21,2:23:28.36:750,28,0	1/1:34,2:32:12.26:275,12,0	1/1:57,9:31:22.22:707,22,0	1/1:34,1:33:63.17:1155,63,0	1/1:34,9:38:72.21:1142,72,0	1/1:15,2:17:15.41:297,15,0	1/1:23,2:24:27.08:496,27,0	1/1:29,4:31:60.09:1142,60,0	1/1:41,2:44:71.86:1400,72,0	1/1:32,4:34:51.15:973,51,0	1/1:29,1:30:66.16:1112,66,0	0/0:29,0:28:64.48:0,64,963	0/0:33,0:32:55.73:0,56,1108	1/1:23,4:17:29.51:484,30,0	1/1:35,4:39:69.19:1344,69,0	0/1:44,4:43:10.26:108,0,10	1/1:28,6:34:52.93:1022,53,0	1/1:27,4:30:46.62:1055,47,0	1/1:14,0:12:3.01:67,3,0	1/1:19,2:21:39.12:789,39,0	1/1:35,3:36:84.06:1355,84,0	1/1:17,2:19:39.11:647,39,0	1/1:8,0:8:15.05:200,15,0
chr10	27987163	.	CAT	C	2767	PASS	AB=0.969;AC=32;AF=0.571;AN=56;BaseQRankSum=0.187;DP=867;FS=11.213;HRun=0;HaplotypeScore=341.8308;InbreedingCoeff=-0.3349;MQ=32.97;MQ0=48;MQRankSum=0.081;QD=3.53;ReadPosRankSum=-2.032;VQSLOD=0.8770;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:27,1:26:8.18:60,0,8	0/1:11,1:12:28.59:29,0,41	0/0:32,0:4:8.79:0,9,62	0/0:42,0:4:8.79:0,9,75	1/1:35,0:34:31.44:181,31,0	0/1:23,1:22:17.37:122,0,17	0/1:31,3:32:3.12:61,0,3	0/1:67,0:31:2.57:203,0,3	0/1:34,2:34:42.19:152,0,42	0/1:40,1:37:57.67:58,0,127	1/1:18,2:19:0.93:52,1,0	0/1:23,0:22:19.18:44,0,19	0/1:27,0:25:24.62:160,0,25	0/1:44,1:42:29.02:196,0,29	0/1:34,1:33:40.62:127,0,41	0/1:33,1:33:81.49:119,0,81	1/1:26,1:27:7.27:181,7,0	0/1:31,1:31:75.71:192,0,76	0/1:24,0:13:15.69:57,0,16	1/1:37,2:39:4.99:219,5,0	1/1:40,1:35:6.90:45,7,0	0/1:31,1:32:5.33:155,0,5	1/1:30,1:31:42.95:220,43,0	1/1:15,3:16:2.84:15,3,0	0/1:20,1:21:3.91:108,0,4	0/1:37,1:35:67.02:103,0,67	0/1:17,0:16:42.12:68,0,42	0/0:9,0:9:11.86:0,12,50
chr10	27987167	.	TAC	T	1602.57	PASS	AB=0.998;AC=25;AF=0.446;AN=56;BaseQRankSum=-7.704;DP=839;FS=11.435;HRun=0;HaplotypeScore=337.6246;InbreedingCoeff=-0.0829;MQ=32.78;MQ0=45;MQRankSum=5.356;QD=2.56;ReadPosRankSum=-5.581;VQSLOD=-0.2937;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:27:5.36:0,5,29	0/1:12,0:12:4.01:4,0,38	0/1:31,1:4:0:0,0,0	0/0:40,0:4:3:0,3,28	1/1:33,0:32:3.15:13,3,0	0/1:23,0:21:24.10:24,0,46	0/1:32,0:29:2.23:16,0,2	0/1:66,0:30:15.78:16,0,90	0/0:36,0:34:8.18:0,8,83	0/1:42,0:37:54.94:72,0,55	0/0:18,0:17:2.80:0,3,13	0/0:21,0:20:8.65:0,9,46	0/1:26,0:24:36.30:39,0,36	0/1:41,0:39:38.34:42,0,38	0/0:35,0:33:5.52:0,6,55	0/1:33,0:32:4.90:5,0,96	1/1:17,13:29:62.59:723,63,0	1/1:9,22:30:43.69:600,44,0	0/1:23,0:12:16.75:17,0,17	0/1:37,0:37:13.96:27,0,14	1/1:39,0:32:9.28:53,9,0	0/1:30,0:30:19.13:19,0,21	1/1:30,0:30:1.76:10,2,0	0/1:18,0:16:0.05:0,0,0	0/0:20,0:20:8.59:0,9,44	0/1:34,0:32:48.68:57,0,49	0/0:15,0:14:8.10:0,8,73	0/1:13,0:13:20.59:21,0,51
chr10	27987179	.	CACAT	C	9116.08	PASS	AB=0.856;AC=47;AF=0.839;AN=56;BaseQRankSum=2.347;DP=858;FS=10.570;HRun=0;HaplotypeScore=316.0311;InbreedingCoeff=0.6737;MQ=33.36;MQ0=49;MQRankSum=-4.167;QD=11.78;ReadPosRankSum=-4.556;VQSLOD=2.2346;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:23,7:28:52.82:354,53,0	1/1:16,3:19:44.55:428,45,0	0/0:27,0:6:7.74:0,8,63	0/1:36,0:4:11.37:11,0,77	1/1:21,10:30:18.65:152,19,0	1/1:24,2:24:41.58:299,42,0	1/1:23,13:32:37.62:307,38,0	0/1:56,5:24:99:264,0,214	1/1:30,8:36:64.58:458,65,0	1/1:31,10:36:88.24:1018,88,0	1/1:11,6:17:20.53:139,21,0	1/1:12,6:18:35.13:218,35,0	1/1:21,4:23:40.40:401,40,0	1/1:36,6:40:56.95:515,57,0	1/1:27,10:33:55.68:408,56,0	1/1:32,6:37:67.56:671,68,0	0/0:26,0:25:49.92:0,50,401	0/0:31,0:30:47.05:0,47,391	1/1:26,1:10:20.26:237,20,0	1/1:33,4:36:42.90:463,43,0	1/1:45,2:42:48.15:353,48,0	1/1:23,4:27:40.97:364,41,0	1/1:20,8:27:23.02:165,23,0	0/1:9,11:18:0.05:0,0,0	1/1:16,6:22:38.37:277,38,0	1/1:28,5:32:83.46:911,83,0	1/1:16,2:17:39.54:268,40,0	1/1:16,2:18:47.40:434,47,0
chr10	27987181	.	CAT	C	6265.77	PASS	AB=0.980;AC=50;AF=0.893;AN=56;BaseQRankSum=0.579;DP=853;FS=11.346;HRun=0;HaplotypeScore=313.7045;InbreedingCoeff=0.2498;MQ=33.60;MQ0=49;MQRankSum=0.577;QD=7.58;ReadPosRankSum=-1.163;VQSLOD=3.0188;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:27,3:28:52.72:329,53,0	1/1:18,1:19:39.15:248,39,0	0/0:26,0:5:0.92:0,1,34	0/1:33,0:4:11.37:11,0,56	1/1:30,1:30:18.40:117,18,0	1/1:19,5:22:35.41:235,35,0	1/1:33,2:32:18.65:206,19,0	0/1:63,0:26:99:150,0,264	1/1:38,1:37:48.46:314,48,0	1/1:37,2:34:67.47:466,67,0	1/1:18,0:17:18.20:113,18,0	1/1:19,0:19:28.89:171,29,0	1/1:23,1:22:32.50:178,32,0	1/1:35,7:40:34.19:310,34,0	1/1:35,1:33:46.07:272,46,0	1/1:35,3:37:54.97:337,55,0	1/1:26,0:25:27.42:216,27,0	0/1:30,1:30:25.90:199,0,26	1/1:26,2:10:9.15:128,9,0	1/1:36,2:37:42.88:312,43,0	1/1:47,1:42:39.81:345,40,0	1/1:25,3:28:39.69:247,40,0	1/1:27,0:26:19.94:123,20,0	0/1:19,1:18:0.05:0,0,0	1/1:22,0:22:33.22:212,33,0	1/1:29,4:32:86.69:566,87,0	1/1:17,1:17:30.43:161,30,0	1/1:17,1:18:41.52:299,42,0
chr10	27987787	.	GTA	G	43.21	PASS	AB=0.824;AC=5;AF=0.227;AN=22;BaseQRankSum=0.448;DP=68;FS=0.000;HRun=0;HaplotypeScore=50.3323;InbreedingCoeff=-0.0345;MQ=38.95;MQ0=4;MQRankSum=-2.238;QD=1.60;ReadPosRankSum=-0.720;VQSLOD=1.2133;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:3,0:3:3.01:0,3,45	./.	./.	./.	./.	0/0:4,2:5:0.47:0,0,1	./.	0/1:14,2:11:80.23:80,0,96	./.	1/1:3,0:3:0.19:1,0,0	./.	./.	./.	0/0:1,0:1:0.47:0,0,1	./.	./.	0/0:15,0:15:36.12:0,36,608	0/0:8,0:8:21.07:0,21,330	0/1:4,1:4:31.19:31,0,68	./.	./.	./.	./.	./.	./.	0/0:2,0:2:5.90:0,6,40	0/1:2,1:3:12.04:12,0,24	0/0:1,0:1:3.01:0,3,49
chr10	27987805	.	GTA	G	500.41	PASS	AB=0.762;AC=11;AF=0.423;AN=26;BaseQRankSum=2.320;DP=84;FS=31.212;HRun=0;HaplotypeScore=60.1999;InbreedingCoeff=0.4582;MQ=36.87;MQ0=2;MQRankSum=-3.168;QD=16.14;ReadPosRankSum=0.268;VQSLOD=1.6948;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:2,2:4:3.01:0,3,36	./.	./.	0/0:6,0:2:2.92:0,3,8	./.	0/0:1,5:6:0.47:0,0,1	./.	0/1:11,5:13:47.18:170,0,47	./.	1/1:1,3:4:9.50:121,10,0	./.	./.	1/1:0,1:1:3.01:34,3,0	0/0:0,2:2:0.47:0,0,1	./.	./.	0/0:12,0:12:27.09:0,27,448	0/0:10,0:10:27.09:0,27,443	1/1:2,2:3:9.03:110,9,0	./.	./.	./.	./.	./.	./.	1/1:0,3:3:9.02:100,9,0	1/1:1,2:3:6.02:74,6,0	0/0:3,4:7:2.60:0,3,52
chr10	27987815	.	GTA	G	40.47	PASS	AB=0.900;AC=11;AF=0.289;AN=38;BaseQRankSum=2.867;DP=101;FS=4.034;HRun=0;HaplotypeScore=63.1291;InbreedingCoeff=0.2179;MQ=58.04;MQ0=2;MQRankSum=-2.101;QD=1.16;ReadPosRankSum=-0.453;VQSLOD=0.6855;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:4,0:4:0:0,0,0	0/0:1,0:1:3.01:0,3,38	1/1:2,0:1:3:28,3,0	0/0:6,0:4:7.91:0,8,36	./.	0/0:8,0:8:6.49:0,6,97	1/1:1,0:1:0.89:2,1,0	0/1:16,2:16:43.96:44,0,160	0/0:1,0:1:3.01:0,3,48	0/0:4,0:4:0.47:0,0,1	0/0:2,0:2:1.83:0,2,46	./.	0/0:1,0:1:0:0,0,0	1/1:3,0:3:0.32:1,0,0	./.	./.	0/0:13,0:13:27.09:0,27,445	0/0:10,0:10:27.09:0,27,451	0/0:4,0:3:2.98:0,3,8	./.	0/0:1,0:1:3.01:0,3,48	./.	./.	./.	./.	0/1:3,1:4:27.69:28,0,44	1/1:2,1:3:3.89:36,4,0	0/0:7,0:7:2.60:0,3,52
chr10	27987852	.	TA	T	4372.76	PASS	AB=1.000;AC=51;AF=0.944;AN=54;BaseQRankSum=-1.950;DP=130;FS=30.950;HRun=1;HaplotypeScore=65.6010;InbreedingCoeff=0.1470;MQ=65.86;MQ0=0;MQRankSum=-2.874;QD=34.43;ReadPosRankSum=1.815;VQSLOD=2.8673;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,7:7:15.05:195,15,0	1/1:0,2:2:6.02:84,6,0	0/0:3,0:2:3.01:0,3,48	0/1:7,0:5:25.69:26,0,53	1/1:0,3:3:8.98:89,9,0	1/1:0,9:9:26.78:288,27,0	1/1:0,1:1:3.01:35,3,0	1/1:0,14:14:42.14:586,42,0	1/1:0,5:5:15.05:181,15,0	1/1:0,6:6:18.06:251,18,0	1/1:0,8:8:24.07:286,24,0	1/1:0,3:3:9.03:104,9,0	1/1:0,1:1:3.01:42,3,0	1/1:0,5:5:14.71:151,15,0	1/1:0,2:2:6.02:70,6,0	1/1:0,1:1:3.01:34,3,0	1/1:1,4:5:15.02:190,15,0	1/1:0,13:13:33.11:451,33,0	1/1:0,8:8:24.08:334,24,0	1/1:0,2:2:6.02:70,6,0	1/1:0,2:2:6.02:77,6,0	./.	1/1:0,1:1:3.01:35,3,0	1/1:0,2:2:3.01:42,3,0	1/1:0,4:4:12.04:140,12,0	1/1:0,7:7:21.04:273,21,0	1/1:0,4:4:12.04:161,12,0	1/1:0,5:5:15.05:181,15,0
chr10	27988518	.	G	GATAT	8527	PASS	AB=0.769;AC=52;AF=0.963;AN=54;BaseQRankSum=-1.815;DP=283;FS=0.000;HRun=0;HaplotypeScore=76.3421;InbreedingCoeff=0.0882;MQ=52.52;MQ0=0;MQRankSum=-0.106;QD=30.35;ReadPosRankSum=1.136;VQSLOD=4.5849;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,12:18:32.85:762,33,0	1/1:0,3:3:9.03:225,9,0	0/1:8,0:5:3.27:3,0,134	./.	1/1:11,7:20:20.55:351,21,0	1/1:4,4:10:17.37:263,17,0	1/1:5,6:12:20.86:463,21,0	1/1:16,12:30:47.73:1028,48,0	1/1:3,2:5:2.88:75,3,0	1/1:9,4:14:14.82:261,15,0	1/1:8,3:12:8.81:162,9,0	1/1:2,3:5:9.03:225,9,0	1/1:2,6:8:17.60:326,18,0	1/1:5,1:6:9.03:196,9,0	1/1:2,3:6:11.83:238,12,0	1/1:1,3:6:14.45:247,14,0	0/1:3,14:20:15.48:666,0,15	1/1:1,8:10:21.07:526,21,0	1/1:4,2:8:20.51:346,21,0	1/1:4,7:11:10.46:297,10,0	1/1:2,1:6:8.50:100,8,0	1/1:1,3:3:9.03:225,9,0	1/1:2,5:7:6.02:150,6,0	1/1:3,2:6:8.77:163,9,0	1/1:4,5:10:17.83:387,18,0	1/1:11,2:15:23.61:385,24,0	1/1:6,4:10:9.03:225,9,0	1/1:2,4:8:14.63:231,15,0
chr10	27988633	.	GGTGT	G	494.35	PASS	AB=0.778;AC=17;AF=0.708;AN=24;BaseQRankSum=-0.467;DP=166;FS=7.168;HRun=0;HaplotypeScore=34.1919;InbreedingCoeff=0.3350;MQ=77.06;MQ0=10;MQRankSum=2.604;QD=10.30;ReadPosRankSum=-0.935;VQSLOD=0.5502;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	./.	1/1:4,0:4:3.01:47,3,0	0/1:5,2:7:30.06:85,0,30	./.	./.	./.	./.	./.	./.	./.	./.	1/1:1,1:2:3.01:47,3,0	0/0:19,0:18:9.46:0,9,123	0/0:8,0:8:9.03:0,9,178	1/1:6,0:5:3.01:44,3,0	1/1:4,0:4:3.01:47,3,0	1/1:7,4:11:3.01:47,3,0	./.	./.	1/1:4,2:6:6.02:94,6,0	1/1:3,0:3:3.01:47,3,0	1/1:2,3:5:9.03:141,9,0	./.	0/0:8,0:8:6.02:0,6,136
chr10	27988752	.	G	GT	6881.08	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-0.742;DP=317;FS=154.165;HRun=7;HaplotypeScore=45.9089;InbreedingCoeff=0.8707;MQ=84.18;MQ0=0;MQRankSum=-7.553;QD=27.20;ReadPosRankSum=1.094;VQSLOD=-0.5843;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,3:5:5.50:46,6,0	1/1:1,3:4:10.27:111,10,0	0/0:19,0:19:31.11:0,31,293	0/0:14,0:14:29.50:0,29,242	1/1:3,21:24:54.63:638,55,0	1/1:1,8:9:24.07:289,24,0	1/1:4,6:10:15.05:180,15,0	1/1:6,10:16:29.68:350,30,0	1/1:2,16:18:45.14:541,45,0	1/1:2,10:12:30.09:362,30,0	1/1:0,12:12:36.11:430,36,0	1/1:0,8:8:24.07:288,24,0	1/1:1,5:6:12.04:141,12,0	1/1:1,7:8:21.06:252,21,0	1/1:0,9:9:27.08:325,27,0	1/1:1,8:9:24.07:289,24,0	0/0:22,0:21:59.95:0,60,547	0/0:9,0:9:24.04:0,24,232	1/1:4,9:12:28.29:313,28,0	1/1:1,14:15:43.01:507,43,0	1/1:2,4:6:9.03:105,9,0	1/1:0,8:8:24.07:289,24,0	1/1:0,7:7:21.06:253,21,0	1/1:1,6:7:6.02:71,6,0	1/1:1,11:12:33.10:397,33,0	1/1:5,12:17:20.53:417,21,0	1/1:1,8:9:18.06:216,18,0	1/1:5,4:9:6.02:72,6,0
chr10	27989053	.	TTGTC	T	15779.38	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=8.343;DP=562;FS=16.653;HRun=0;HaplotypeScore=141.4777;InbreedingCoeff=0.9068;MQ=60.37;MQ0=2;MQRankSum=0.762;QD=33.15;ReadPosRankSum=4.144;VQSLOD=3.7772;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,21:24:60.20:975,60,0	1/1:2,1:3:3.01:49,3,0	0/0:25,0:16:24.05:0,24,395	0/0:20,0:18:37.68:0,38,765	1/1:5,21:26:63.21:1014,63,0	1/1:10,17:27:54.18:878,54,0	1/1:6,2:8:3.01:49,3,0	1/1:15,21:36:63.18:952,63,0	1/1:8,12:20:45.12:682,45,0	1/1:11,23:35:75.20:1119,75,0	1/1:3,19:22:60.20:975,60,0	1/1:4,9:13:27.09:439,27,0	1/1:5,8:13:27.07:414,27,0	1/1:6,13:19:45.14:708,45,0	1/1:8,9:17:33.10:512,33,0	1/1:5,11:16:33.11:529,33,0	0/0:21,0:21:51.16:0,51,1158	0/0:20,0:20:57.20:0,57,1281	1/1:7,10:17:30.09:464,30,0	1/1:2,19:21:63.20:1001,63,0	1/1:7,15:22:42.14:683,42,0	1/1:7,11:18:39.13:633,39,0	1/1:5,12:17:36.12:585,36,0	1/1:7,8:15:24.08:390,24,0	1/1:5,11:16:33.11:536,33,0	1/1:5,20:25:63.22:1024,63,0	1/1:15,13:27:45.15:731,45,0	1/1:9,9:18:27.09:439,27,0
chr10	27989136	.	A	ATAGT	30277.30	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-9.049;DP=694;FS=6.132;HRun=0;HaplotypeScore=115.5865;InbreedingCoeff=0.9765;MQ=73.85;MQ0=4;MQRankSum=-4.152;QD=49.07;ReadPosRankSum=2.222;VQSLOD=5.5793;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,17:25:60.20:1366,60,0	1/1:0,8:10:14.69:373,15,0	0/0:22,0:22:45.10:0,45,681	0/0:16,0:15:26.99:0,27,393	1/1:5,43:49:99:2694,120,0	1/1:5,16:22:48.16:1173,48,0	1/1:6,10:17:18.06:448,18,0	1/1:10,23:34:72.22:1460,72,0	1/1:8,15:23:54.19:1340,54,0	1/1:20,15:35:78.21:1620,78,0	1/1:4,24:30:60.21:1452,60,0	1/1:2,11:13:33.11:807,33,0	1/1:5,22:27:63.22:1563,63,0	1/1:6,19:25:45.15:1120,45,0	1/1:4,21:24:51.17:1159,51,0	1/1:3,18:20:48.16:1181,48,0	0/0:20,0:20:48.10:0,48,728	0/0:19,0:19:39.12:0,39,634	1/1:13,4:17:30.09:636,30,0	1/1:6,27:32:72.16:1632,72,0	1/1:5,16:20:33.11:821,33,0	1/1:6,22:29:57.19:1328,57,0	1/1:4,23:26:51.17:1231,51,0	1/1:0,14:15:33.11:821,33,0	1/1:4,24:29:57.20:1418,57,0	1/1:8,40:48:99:2726,120,0	1/1:8,24:31:69.10:1715,69,0	1/1:4,1:5:9.03:192,9,0
chr10	27989682	.	CT	C	9039.88	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=1.122;DP=432;FS=15.342;HRun=8;HaplotypeScore=48.4510;InbreedingCoeff=0.9448;MQ=76.02;MQ0=0;MQRankSum=-3.784;QD=24.24;ReadPosRankSum=2.285;VQSLOD=3.9962;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,21:22:51.08:492,51,0	1/1:0,5:5:15.02:145,15,0	0/0:19,0:16:31.98:0,32,308	0/0:14,0:12:4.52:0,5,155	1/1:1,20:21:60.05:570,60,0	1/1:1,14:15:39.06:376,39,0	1/1:0,8:8:24.04:232,24,0	1/1:4,26:30:78.10:746,78,0	1/1:4,14:18:36.01:338,36,0	1/1:2,18:20:54.09:521,54,0	1/1:1,17:18:51.08:491,51,0	1/1:0,12:12:36.06:348,36,0	1/1:1,11:12:30.05:290,30,0	1/1:0,16:16:45.07:434,45,0	1/1:1,17:18:51.08:492,51,0	1/1:1,9:10:18.03:174,18,0	0/0:15,0:15:42.12:0,42,496	0/0:11,0:11:27.05:0,27,302	1/1:3,20:23:60.06:568,60,0	1/1:2,15:17:42.01:396,42,0	1/1:0,5:5:15.02:145,15,0	1/1:2,7:9:21.03:203,21,0	1/1:2,13:15:33.05:319,33,0	1/1:0,10:10:27.04:261,27,0	1/1:2,17:19:42.07:406,42,0	1/1:4,21:25:63.09:603,63,0	1/1:4,13:17:33.05:318,33,0	1/1:2,6:8:18.03:174,18,0
chr10	27989862	.	CCCGCCCGG	C	12215.79	PASS	AB=1.000;AC=51;AF=0.911;AN=56;BaseQRankSum=3.822;DP=202;FS=0.981;HRun=0;HaplotypeScore=144.9930;InbreedingCoeff=0.6082;MQ=50.82;MQ0=0;MQRankSum=-3.678;QD=67.49;ReadPosRankSum=5.111;VQSLOD=4.8330;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,10:13:33.11:813,33,0	1/1:1,3:4:12.04:295,12,0	0/0:8,0:6:11.81:0,12,111	0/0:13,0:13:32.50:0,32,360	1/1:1,8:9:27.06:546,27,0	1/1:0,6:6:18.06:442,18,0	1/1:3,6:9:24.08:538,24,0	1/1:1,5:6:18.06:442,18,0	1/1:0,8:8:24.08:591,24,0	1/1:1,5:6:18.06:440,18,0	1/1:0,6:6:18.06:440,18,0	1/1:3,7:10:30.09:646,30,0	1/1:0,6:6:18.06:466,18,0	1/1:0,7:7:21.07:540,21,0	1/1:0,11:11:33.11:833,33,0	1/1:0,6:6:18.06:461,18,0	0/1:5,0:5:14.37:14,0,42	1/1:3,0:3:9:144,9,0	1/1:0,5:5:15.05:384,15,0	1/1:0,5:5:12.04:305,12,0	1/1:0,2:2:6.02:117,6,0	1/1:0,3:3:9.03:225,9,0	1/1:1,5:6:18.05:366,18,0	1/1:0,5:5:12.04:295,12,0	1/1:0,10:10:30.10:736,30,0	1/1:0,13:13:39.13:1036,39,0	1/1:4,12:16:48.10:1020,48,0	1/1:0,1:1:3.01:79,3,0
chr10	27989872	.	AG	A	3542.17	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=5.304;DP=174;FS=6.779;HRun=2;HaplotypeScore=140.7702;InbreedingCoeff=0.7221;MQ=39.62;MQ0=0;MQRankSum=-1.279;QD=22.56;ReadPosRankSum=3.571;VQSLOD=3.3981;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,10:11:31.73:244,32,0	1/1:0,4:4:11.79:88,12,0	0/0:3,0:2:3:0,3,25	0/0:8,0:8:16.98:0,17,140	1/1:0,8:8:20.27:142,20,0	1/1:0,6:6:17.56:130,18,0	1/1:1,6:7:19.99:152,20,0	1/1:0,5:5:15.01:134,15,0	1/1:0,8:8:22.98:173,23,0	1/1:0,5:5:15.01:134,15,0	1/1:0,6:6:17.63:128,18,0	1/1:0,7:7:20.86:155,21,0	1/1:0,6:6:17.98:150,18,0	1/1:0,7:7:20.96:172,21,0	1/1:0,11:11:32.90:261,33,0	1/1:0,6:6:17.83:140,18,0	0/0:5,0:5:9.03:0,9,134	0/0:1,0:1:3.01:0,3,35	1/1:0,5:5:14.80:121,15,0	1/1:0,4:4:11.98:98,12,0	1/1:0,2:2:3.27:14,3,0	1/1:0,3:3:8.97:69,9,0	1/1:1,4:5:12.44:81,12,0	1/1:0,5:5:11.90:87,12,0	1/1:0,10:10:29.06:211,29,0	1/1:1,12:13:38.92:332,39,0	1/1:0,12:12:35.93:298,36,0	1/1:0,1:1:3:28,3,0
chr10	27989877	.	GGATGT	G	2770.55	PASS	AC=48;AF=0.923;AN=52;BaseQRankSum=1.992;DP=170;FS=10.557;HRun=0;HaplotypeScore=161.0499;InbreedingCoeff=0.6079;MQ=39.70;MQ0=0;MQRankSum=-1.307;QD=17.42;ReadPosRankSum=2.377;VQSLOD=2.8787;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:12,0:12:27.25:206,27,0	1/1:4,0:4:7.37:50,7,0	./.	0/0:4,0:4:8.69:0,9,82	1/1:5,3:8:13.90:105,14,0	1/1:6,0:6:17.65:122,18,0	1/1:6,1:7:15.28:109,15,0	1/1:5,0:5:14.84:103,15,0	1/1:6,2:8:21.70:182,22,0	1/1:5,0:5:12.33:87,12,0	1/1:4,2:6:12.92:58,13,0	1/1:4,3:7:10.50:114,11,0	1/1:5,1:6:17.61:172,18,0	1/1:5,2:7:19.52:190,20,0	1/1:10,1:11:25.24:156,25,0	1/1:3,3:6:15.67:192,16,0	0/0:5,0:5:8.95:0,9,136	./.	1/1:4,1:5:13.95:141,14,0	1/1:2,2:4:6.15:30,6,0	1/1:2,0:2:2.51:7,3,0	1/1:2,1:3:7:33,7,0	1/1:3,2:5:10.14:35,10,0	1/1:4,1:5:5.38:48,5,0	1/1:8,3:11:13.21:215,13,0	1/1:11,2:13:35.65:301,36,0	1/1:10,2:12:32.25:227,32,0	1/1:1,0:1:1.82:5,2,0
chr10	27989885	.	GGAA	G	127.54	PASS	AB=0.838;AC=8;AF=0.148;AN=54;BaseQRankSum=4.196;DP=210;FS=0.000;HRun=0;HaplotypeScore=174.8962;InbreedingCoeff=-0.2243;MQ=33.43;MQ0=0;MQRankSum=-0.676;QD=1.56;ReadPosRankSum=3.857;VQSLOD=2.1261;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:3.03:0,3,114	0/0:4,0:4:11.68:0,12,83	./.	0/0:3,0:3:4.86:0,5,48	0/0:6,3:9:19.66:0,20,169	0/0:6,0:6:16.28:0,16,73	0/1:16,1:16:6.45:6,0,129	0/0:10,0:10:13.01:0,13,91	0/1:7,2:9:53.62:54,0,115	0/0:6,0:6:16.76:0,17,113	0/0:5,1:6:14.90:0,15,134	0/0:6,2:8:14.25:0,14,129	0/1:5,1:6:29.96:30,0,46	0/1:5,2:7:8.88:9,0,65	0/0:11,0:11:9.91:0,10,232	0/1:3,3:6:46.22:62,0,46	0/0:5,0:5:6.02:0,6,141	0/0:4,0:4:7.96:0,8,38	0/1:7,1:8:20.18:20,0,66	0/0:3,2:5:13.68:0,14,129	0/0:4,0:4:5.87:0,6,35	0/0:4,1:5:8.76:0,9,62	0/0:4,1:5:15.01:0,15,163	0/0:6,0:6:6.57:0,7,85	0/1:10,2:12:53.21:53,0,98	0/1:15,2:17:20.36:20,0,225	0/0:10,2:12:11.53:0,12,185	0/0:2,0:1:3.01:0,3,34
chr10	27989914	.	GAAGA	G	2168.77	PASS	AB=1.000;AC=46;AF=0.920;AN=50;BaseQRankSum=-0.094;DP=198;FS=8.112;HRun=0;HaplotypeScore=124.6540;InbreedingCoeff=0.3291;MQ=27.98;MQ0=6;MQRankSum=1.027;QD=11.85;ReadPosRankSum=-0.616;VQSLOD=2.2519;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:12:2.55:111,3,0	./.	./.	./.	1/1:9,0:9:11.85:59,12,0	1/1:3,0:3:8:64,8,0	1/1:14,0:13:4.95:88,5,0	1/1:10,0:10:24.83:142,25,0	1/1:11,0:11:28.59:202,29,0	1/1:6,0:6:10.21:83,10,0	0/1:7,0:6:0:0,0,0	1/1:7,0:7:13.32:93,13,0	1/1:5,0:5:13.12:114,13,0	1/1:6,0:6:17.88:168,18,0	1/1:6,0:6:5.93:53,6,0	1/1:8,0:8:23.56:203,24,0	0/0:3,0:3:6.02:0,6,80	1/1:1,0:1:2.90:16,3,0	1/1:7,6:10:25.04:199,25,0	1/1:6,0:5:2.96:19,3,0	1/1:5,0:3:3.81:19,4,0	0/1:6,0:6:0:0,0,0	1/1:7,0:7:3.43:20,3,0	1/1:7,0:6:8.35:64,8,0	1/1:10,0:10:0.52:173,1,0	1/1:13,0:13:23.12:186,23,0	1/1:6,0:6:14.88:130,15,0	1/1:4,0:3:8.84:55,9,0
chr10	27989927	.	GAGGGAGGGAGGGAGGAAGAA	G	5071.07	PASS	AB=1.000;AC=40;AF=0.833;AN=48;BaseQRankSum=-1.476;DP=196;FS=8.895;HRun=0;HaplotypeScore=149.1309;InbreedingCoeff=0.1950;MQ=32.68;MQ0=14;MQRankSum=0.552;QD=31.11;ReadPosRankSum=-0.501;VQSLOD=3.2861;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:13,0:11:8.38:165,0,8	./.	./.	0/0:8,0:1:3.01:0,3,49	1/1:9,0:9:12.04:374,12,0	1/1:5,0:4:6.49:214,6,0	1/1:11,0:10:6.02:98,6,0	1/1:10,0:8:3.01:35,3,0	1/1:10,0:10:16.30:517,16,0	1/1:4,0:4:9.46:234,9,0	./.	1/1:6,0:6:3.01:107,3,0	1/1:6,0:6:12.04:423,12,0	1/1:7,0:7:9.50:319,10,0	1/1:3,0:3:3.48:90,3,0	1/1:10,0:9:13.76:467,14,0	./.	0/0:1,0:1:3.01:0,3,65	1/1:13,0:9:9.33:221,9,0	1/1:7,0:6:9.03:271,9,0	1/1:5,0:3:3.01:37,3,0	0/0:1,6:7:0:0,0,0	1/1:6,0:6:3.01:105,3,0	1/1:5,0:3:3.01:38,3,0	0/1:11,0:10:34.59:368,0,35	1/1:11,0:11:16.82:439,17,0	1/1:7,0:7:9.50:309,10,0	1/1:4,0:3:7.27:241,7,0
chr10	27989939	.	GAGGAAGAA	G	3042.94	PASS	AB=1.000;AC=41;AF=0.788;AN=52;BaseQRankSum=-1.059;DP=175;FS=11.195;HRun=0;HaplotypeScore=81.6642;InbreedingCoeff=0.2272;MQ=40.18;MQ0=17;MQRankSum=-0.720;QD=20.99;ReadPosRankSum=1.500;VQSLOD=1.9731;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:13,0:10:8.47:78,0,8	1/1:1,0:1:3:29,3,0	0/0:8,0:2:1.89:0,2,6	0/0:9,0:1:3.01:0,3,52	1/1:6,0:6:12.04:220,12,0	1/1:5,0:4:6.49:98,6,0	1/1:10,0:9:12:146,12,0	1/1:6,0:4:5.96:54,6,0	1/1:10,0:10:22.25:331,22,0	1/1:3,0:3:8.99:148,9,0	./.	1/1:5,0:5:3.48:55,3,0	1/1:7,0:7:17.99:253,18,0	1/1:7,0:7:18.51:278,19,0	0/1:4,0:4:12.01:34,0,12	1/1:10,0:9:15.51:263,16,0	./.	0/0:1,0:1:2.68:0,3,11	1/1:12,0:5:11.81:122,12,0	1/1:4,0:4:9.03:129,9,0	1/1:5,0:3:6.01:66,6,0	0/0:6,0:6:0.47:0,0,1	1/1:3,0:3:2.95:52,3,0	1/1:3,0:2:3.01:38,3,0	0/1:9,0:8:36.67:198,0,37	1/1:10,0:10:19.75:294,20,0	1/1:7,0:7:12.50:160,12,0	1/1:4,0:3:7.27:122,7,0
chr10	27990780	.	CA	C	20435.33	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=1.499;DP=632;FS=8.941;HRun=2;HaplotypeScore=66.4278;InbreedingCoeff=0.9968;MQ=85.26;MQ0=0;MQRankSum=-7.049;QD=35.79;ReadPosRankSum=4.746;VQSLOD=5.0257;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,20:20:51.17:662,51,0	1/1:1,6:7:18.06:234,18,0	0/0:20,0:20:54.01:0,54,738	0/0:18,0:18:48.12:0,48,657	1/1:0,29:29:84.27:1090,84,0	1/1:0,30:30:87.28:1130,87,0	1/1:0,17:17:39.13:506,39,0	1/1:3,32:35:96.30:1233,96,0	1/1:0,26:26:72.23:935,72,0	1/1:0,33:33:99:1285,99,0	1/1:0,35:35:96.31:1246,96,0	1/1:0,23:23:66.21:857,66,0	1/1:1,23:24:69.22:896,69,0	1/1:0,17:17:51.17:662,51,0	1/1:0,35:35:93.30:1208,93,0	1/1:1,23:24:63.20:818,63,0	0/0:14,0:14:42.14:0,42,630	0/0:9,0:9:26.98:0,27,375	1/1:1,12:13:36.12:468,36,0	1/1:0,41:41:99:1441,111,0	1/1:0,22:22:63.20:818,63,0	1/1:0,24:24:63.20:818,63,0	1/1:0,18:18:51.17:662,51,0	1/1:0,22:22:63.20:818,63,0	1/1:0,11:11:24.08:311,24,0	1/1:1,25:26:75.24:973,75,0	1/1:0,23:23:57.19:740,57,0	1/1:0,16:16:48.16:623,48,0
chr10	27991250	.	GA	G	9021.96	PASS	AB=0.929;AC=49;AF=0.875;AN=56;BaseQRankSum=4.101;DP=435;FS=4.245;HRun=9;HaplotypeScore=42.6057;InbreedingCoeff=0.8064;MQ=67.90;MQ0=0;MQRankSum=-0.276;QD=22.55;ReadPosRankSum=3.636;VQSLOD=5.4814;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,20:20:60.03:549,60,0	1/1:1,4:5:12.01:110,12,0	0/1:12,1:8:21.24:21,0,120	0/0:7,0:6:14.97:0,15,140	1/1:0,25:25:71.91:641,72,0	1/1:0,18:18:48.03:439,48,0	1/1:0,7:7:18.01:165,18,0	1/1:4,21:25:63.01:571,63,0	1/1:0,13:13:36.02:329,36,0	1/1:5,25:30:72.03:659,72,0	1/1:3,27:30:75.04:686,75,0	1/1:0,6:6:18.01:165,18,0	1/1:1,8:9:21.01:192,21,0	1/1:0,13:13:33.02:302,33,0	1/1:0,8:8:18.01:165,18,0	1/1:0,12:12:27.01:247,27,0	0/0:17,0:17:45.13:0,45,519	0/0:11,0:11:33.10:0,33,380	1/1:0,19:19:57.01:515,57,0	1/1:2,26:28:72.02:659,72,0	1/1:2,5:7:12:110,12,0	1/1:1,14:15:33.01:302,33,0	1/1:1,24:25:69.04:631,69,0	1/1:1,9:10:24.01:220,24,0	1/1:1,12:13:24.01:220,24,0	1/1:3,14:17:42.02:383,42,0	1/1:3,19:22:51.03:467,51,0	1/1:0,10:10:30.02:275,30,0
chr10	27992171	.	T	TACAC	748.17	PASS	AB=0.989;AC=26;AF=0.464;AN=56;BaseQRankSum=3.780;DP=784;FS=6.334;HRun=0;HaplotypeScore=238.9391;InbreedingCoeff=-0.3224;MQ=52.19;MQ0=13;MQRankSum=-1.938;QD=1.21;ReadPosRankSum=0.607;VQSLOD=1.9266;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:29:6.53:7,0,14	1/1:5,0:5:2.99:24,3,0	0/0:38,0:23:39.04:0,39,521	0/0:44,0:31:57.53:0,58,752	0/1:30,1:30:24.55:25,0,73	1/1:27,0:27:1.98:16,2,0	0/1:22,0:22:0.98:1,0,19	0/1:35,0:34:23.92:24,0,64	0/1:31,0:31:28.39:28,0,108	0/1:43,0:41:63.69:64,0,145	0/1:27,0:27:43.85:44,0,46	0/1:25,1:26:13.99:46,0,14	0/0:26,0:26:10.47:0,10,58	0/1:31,0:31:43.75:44,0,69	1/1:23,0:23:4.17:57,4,0	0/1:24,0:24:23.08:23,0,23	0/0:17,0:17:22.99:0,23,450	0/1:19,0:19:17.45:17,0,310	0/0:25,0:20:3.58:0,4,65	0/1:40,0:38:3.52:4,0,62	0/1:23,0:24:3.01:26,0,3	0/1:27,2:29:32.43:32,0,51	0/1:20,0:20:15.76:139,0,16	0/1:37,0:37:24.57:105,0,25	0/1:42,0:41:53.40:53,0,66	0/1:29,0:29:52.18:52,0,96	1/1:24,0:23:7.06:74,7,0	0/0:16,0:15:8.40:0,8,68
chr10	27992181	.	T	TACATACAC	5733.31	PASS	AB=0.911;AC=39;AF=0.696;AN=56;BaseQRankSum=-6.660;DP=769;FS=2.231;HRun=0;HaplotypeScore=255.3452;InbreedingCoeff=0.3998;MQ=48.95;MQ0=18;MQRankSum=3.686;QD=9.57;ReadPosRankSum=-1.150;VQSLOD=3.4054;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:29:8.18:246,0,8	1/1:6,0:6:6.44:94,6,0	0/0:28,0:13:35.87:0,36,299	0/0:34,0:21:41.13:0,41,334	1/1:32,0:32:8.28:107,8,0	1/1:5,1:30:3.01:31,3,0	1/1:4,16:23:1.82:5,2,0	1/1:38,0:34:80.92:657,81,0	0/1:6,0:31:49.86:101,0,50	1/1:45,0:43:2.43:626,2,0	0/1:22,0:22:29.27:67,0,29	1/1:6,16:26:3.89:72,4,0	1/1:26,0:25:39.01:410,39,0	1/1:29,0:29:11.89:263,12,0	1/1:22,0:22:27.44:303,27,0	1/1:24,0:24:28.60:225,29,0	0/0:15,0:20:25.78:0,26,288	0/0:16,0:23:15.30:0,15,280	0/1:27,0:21:38.78:296,0,39	0/0:34,0:32:7.11:0,7,20	1/1:23,0:23:6.15:189,6,0	0/0:7,1:30:1.35:0,1,2	1/1:20,0:20:26.97:401,27,0	1/1:38,0:38:36.66:314,37,0	0/1:42,0:41:92.40:337,0,92	1/1:28,0:28:13.61:432,14,0	1/1:26,0:25:36.32:469,36,0	1/1:11,0:10:12.40:90,12,0
chr10	27992183	.	C	CAT	3787.37	PASS	AB=1.000;AC=26;AF=0.464;AN=56;BaseQRankSum=-9.326;DP=750;FS=34.364;HRun=0;HaplotypeScore=203.7755;InbreedingCoeff=-0.3219;MQ=48.08;MQ0=18;MQRankSum=4.787;QD=6.55;ReadPosRankSum=0.846;VQSLOD=1.5258;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:31,0:31:86.05:134,0,86	0/1:6,0:6:13.41:13,0,48	0/0:29,0:14:38.88:0,39,341	0/0:30,0:17:41.23:0,41,334	0/0:19,15:33:17.71:0,18,181	0/1:28,0:28:0.55:1,0,56	0/1:21,0:21:6.20:6,0,20	0/1:38,0:34:70.94:413,0,71	0/1:24,0:24:19.96:20,0,102	0/1:44,0:42:99:509,0,308	0/1:22,0:22:48.89:49,0,167	0/1:23,0:23:13.06:13,0,21	0/1:25,0:24:48.94:305,0,49	0/1:28,0:28:73.18:213,0,73	0/1:22,0:22:21.89:178,0,22	0/1:23,0:23:88.27:139,0,88	0/0:20,0:20:23.69:0,24,237	0/0:24,0:23:16.39:0,16,173	0/1:27,0:21:99:178,0,103	0/0:12,23:33:0.17:0,0,17	0/1:23,0:23:18.82:157,0,19	1/1:28,0:28:12.53:53,13,0	1/1:20,0:20:1.92:240,2,0	0/1:38,0:38:43.43:218,0,43	0/1:42,0:41:99:274,0,207	0/1:28,0:28:99:212,0,240	1/1:25,1:25:9.86:372,10,0	1/1:11,0:10:12.39:89,12,0
chr10	27993323	.	T	TGTGAGAGAGAGAGA	5556.09	PASS	AB=1.000;AC=49;AF=0.942;AN=52;BaseQRankSum=0.184;DP=435;FS=1.786;HRun=0;HaplotypeScore=187.1710;InbreedingCoeff=-0.0919;MQ=38.00;MQ0=18;MQRankSum=-1.079;QD=12.89;ReadPosRankSum=-4.135;VQSLOD=2.9279;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:11,4:19:12.02:232,12,0	1/1:8,0:8:18.44:230,18,0	./.	./.	1/1:21,0:18:24.40:252,24,0	1/1:8,0:8:6.25:77,6,0	1/1:19,0:17:13.72:170,14,0	1/1:22,0:20:35.34:247,35,0	0/1:19,0:17:23.37:97,0,23	1/1:16,0:13:24.63:738,25,0	1/1:19,0:18:9.05:75,9,0	1/1:16,0:16:15.20:92,15,0	1/1:14,0:13:25.16:358,25,0	1/1:13,0:12:13.36:180,13,0	1/1:20,0:16:3:25,3,0	1/1:9,0:8:5.80:102,6,0	0/1:26,0:25:27.07:27,0,419	0/1:19,0:16:99:143,0,166	1/1:19,0:16:19.44:242,19,0	1/1:22,0:20:27.96:298,28,0	1/1:8,0:8:4.60:43,5,0	1/1:29,0:27:24.08:271,24,0	1/1:12,0:11:11.84:84,12,0	1/1:9,0:9:11.53:158,12,0	1/1:17,0:17:20.41:185,20,0	1/1:22,0:18:32.62:363,33,0	1/1:12,0:12:20.99:481,21,0	1/1:12,0:10:23.94:386,24,0
chr10	27993462	.	T	TG	4246.02	PASS	AB=0.667;AC=51;AF=0.911;AN=56;BaseQRankSum=-4.538;DP=388;FS=26.856;HRun=1;HaplotypeScore=146.2931;InbreedingCoeff=0.4621;MQ=53.23;MQ0=11;MQRankSum=-3.075;QD=12.24;ReadPosRankSum=0.166;VQSLOD=2.0199;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,2:15:9.03:128,9,0	1/1:4,4:8:6.02:80,6,0	0/0:15,0:4:5.56:0,6,57	0/0:26,0:11:27:0,27,279	1/1:14,7:21:3.01:33,3,0	1/1:7,1:7:6.02:70,6,0	1/1:10,4:14:17.67:226,18,0	1/1:14,0:13:9.45:393,9,0	1/1:10,4:14:1.97:37,2,0	1/1:12,8:20:20:592,20,0	1/1:13,6:19:17.75:215,18,0	1/1:11,6:17:17.94:184,18,0	1/1:9,3:12:33.56:394,34,0	1/1:7,2:8:12.03:168,12,0	1/1:8,10:17:14.53:160,15,0	1/1:4,2:6:2.71:30,3,0	1/1:13,2:15:10.05:88,10,0	1/1:7,0:7:15.05:191,15,0	1/1:5,0:2:0.47:1,0,0	1/1:10,5:15:5.98:81,6,0	1/1:9,9:18:5.51:58,6,0	1/1:12,3:15:9.03:114,9,0	1/1:11,10:21:6.45:81,6,0	0/1:4,3:8:0.11:1,0,0	1/1:11,6:17:5.96:64,6,0	1/1:10,4:14:42.11:540,42,0	1/1:5,2:7:6.01:69,6,0	1/1:7,0:8:22.60:250,23,0
chr10	27996702	.	A	AT	12991.67	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-5.521;DP=379;FS=8.663;HRun=0;HaplotypeScore=68.3772;InbreedingCoeff=0.8993;MQ=69.41;MQ0=0;MQRankSum=-4.189;QD=37.77;ReadPosRankSum=3.016;VQSLOD=4.8082;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,8:8:24.08:340,24,0	1/1:0,2:2:3.01:43,3,0	0/0:10,0:10:27.07:0,27,326	0/0:9,0:9:16.06:0,16,201	1/1:2,16:19:51.61:694,52,0	1/1:0,17:17:51.17:723,51,0	1/1:1,10:11:27.09:385,27,0	1/1:0,27:27:81.23:1084,81,0	1/1:1,12:13:30.10:428,30,0	1/1:0,21:21:60.20:857,60,0	1/1:1,20:21:51.08:691,51,0	1/1:0,11:11:33.11:468,33,0	1/1:0,11:12:32.90:438,33,0	1/1:0,17:17:39.13:546,39,0	1/1:0,11:11:33.11:469,33,0	1/1:0,6:6:18.06:256,18,0	0/0:8,0:8:21.96:0,22,289	0/0:8,0:8:22.62:0,23,289	1/1:3,19:22:54.70:750,55,0	1/1:0,26:26:69.23:975,69,0	1/1:0,7:7:21.07:300,21,0	1/1:0,18:18:48.16:683,48,0	1/1:1,20:21:59.23:809,59,0	1/1:2,11:13:38.96:502,39,0	1/1:1,15:16:42.14:599,42,0	1/1:0,11:11:33.03:442,33,0	1/1:0,12:12:33.11:468,33,0	1/1:0,2:2:3.01:43,3,0
chr10	27996751	.	A	AAGGGC	4771.31	PASS	AB=0.750;AC=44;AF=0.957;AN=46;BaseQRankSum=2.266;DP=182;FS=23.370;HRun=0;HaplotypeScore=235.0509;InbreedingCoeff=-0.1186;MQ=79.18;MQ0=0;MQRankSum=-2.579;QD=27.74;ReadPosRankSum=2.362;VQSLOD=3.2434;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,0:6:6.02:138,6,0	./.	0/1:4,3:7:18.79:379,0,19	0/1:6,2:8:31.51:397,0,32	1/1:9,0:9:18.06:353,18,0	1/1:13,0:13:24.08:585,24,0	1/1:5,0:5:6.02:121,6,0	1/1:8,0:8:11.07:230,11,0	1/1:7,0:7:6.82:41,7,0	1/1:7,0:7:12.03:221,12,0	1/1:9,0:9:13.40:274,13,0	1/1:4,0:4:6.02:125,6,0	1/1:8,0:8:15.01:293,15,0	1/1:12,0:12:6.86:84,7,0	./.	1/1:4,0:4:3.01:64,3,0	1/1:4,0:4:6.02:141,6,0	1/1:5,0:5:3.48:94,3,0	1/1:7,0:7:6.02:128,6,0	1/1:11,0:11:9.03:187,9,0	./.	./.	1/1:8,0:8:9.03:206,9,0	1/1:6,0:6:12.04:285,12,0	1/1:11,0:11:6.87:85,7,0	1/1:4,0:4:8.77:153,9,0	1/1:9,0:9:9.03:186,9,0	./.
chr10	27998941	.	CTTGAATGTCAATGTTCATGGCCCA	C	43555.23	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=12.809;DP=636;FS=2.054;HRun=0;HaplotypeScore=383.8314;InbreedingCoeff=0.8599;MQ=76.71;MQ0=0;MQRankSum=-13.525;QD=79.77;ReadPosRankSum=8.290;VQSLOD=3.0808;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:7,25:32:30.57:1645,31,0	1/1:1,3:4:6.02:399,6,0	0/0:20,0:20:60.20:0,60,3712	0/0:25,0:25:75.23:0,75,4632	1/1:4,17:21:17.98:1013,18,0	1/1:2,22:24:45.15:2961,45,0	1/1:8,16:24:18.06:1196,18,0	1/1:14,0:14:3.01:44,3,0	1/1:4,22:26:39.13:2592,39,0	1/1:6,22:28:50.88:2847,51,0	1/1:3,16:19:15.05:997,15,0	1/1:6,20:26:45.15:2956,45,0	1/1:6,23:29:51.17:3254,51,0	1/1:3,22:25:39.13:2590,39,0	1/1:4,23:27:54.19:3492,54,0	1/1:4,20:24:33.11:1960,33,0	0/0:29,0:29:87.30:0,87,8595	0/0:16,0:16:48.12:0,48,4480	1/1:6,18:24:50.93:1824,51,0	1/1:8,20:28:21.07:1396,21,0	1/1:8,19:27:9.86:501,10,0	1/1:0,16:16:26.96:1364,27,0	1/1:4,23:27:35.97:1898,36,0	1/1:6,15:21:15.03:834,15,0	1/1:1,21:22:36.12:2324,36,0	1/1:5,18:23:42.02:1943,42,0	1/1:6,26:32:51.17:3390,51,0	1/1:0,3:3:3.01:133,3,0
chr10	28001225	.	ACACG	A	4281.24	PASS	AB=0.957;AC=42;AF=0.750;AN=56;BaseQRankSum=1.438;DP=669;FS=2.320;HRun=0;HaplotypeScore=142.3622;InbreedingCoeff=0.2783;MQ=67.99;MQ0=11;MQRankSum=-2.099;QD=7.70;ReadPosRankSum=2.033;VQSLOD=4.2055;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:49,0:48:66.72:562,67,0	0/1:5,0:5:15.04:15,0,84	0/0:22,0:16:38.02:0,38,378	0/0:33,0:24:15.61:0,16,528	1/1:20,0:19:0.47:1,0,0	1/1:20,1:21:31.66:261,32,0	1/1:21,0:20:4.36:21,4,0	1/1:25,0:24:35.98:334,36,0	0/1:14,2:15:21.63:190,0,22	1/1:18,0:18:37.22:318,37,0	1/1:14,0:14:3.29:17,3,0	1/1:28,1:29:2.01:57,2,0	1/1:23,1:24:3.27:55,3,0	0/1:15,1:15:11.40:271,0,11	1/1:23,2:25:52.23:475,52,0	0/1:26,1:26:13.02:86,0,13	0/0:34,0:34:50.01:0,50,670	0/0:24,0:23:38.77:0,39,501	1/1:14,0:14:20.05:186,20,0	1/1:5,15:20:6.02:108,6,0	0/1:45,0:44:99:427,0,151	1/1:17,0:17:1.36:3,1,0	1/1:17,0:17:0.68:2,1,0	0/1:33,2:35:95.74:98,0,96	1/1:19,1:20:2.88:54,3,0	1/1:31,0:31:49.10:360,49,0	1/1:31,1:32:38.51:376,39,0	1/1:15,0:15:1.41:3,1,0
chr10	28001227	.	ACG	A	7300.80	PASS	AB=0.688;AC=43;AF=0.768;AN=56;BaseQRankSum=1.531;DP=674;FS=2.663;HRun=0;HaplotypeScore=116.8039;InbreedingCoeff=0.4349;MQ=71.39;MQ0=11;MQRankSum=-3.546;QD=13.13;ReadPosRankSum=2.071;VQSLOD=4.9552;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:48,2:49:77.11:748,77,0	0/1:5,1:6:25.17:56,0,25	0/0:24,0:18:43.97:0,44,421	0/0:36,0:27:24.43:0,24,585	0/1:1,20:20:9.31:165,0,9	1/1:17,3:20:42.33:444,42,0	1/1:4,16:19:11.97:155,12,0	1/1:25,0:24:29.28:430,29,0	1/1:15,3:17:21.40:391,21,0	1/1:1,15:16:37.92:335,38,0	1/1:0,14:14:5.91:62,6,0	1/1:4,26:30:11.96:146,12,0	1/1:5,18:23:5.87:67,6,0	1/1:14,1:14:14.66:221,15,0	1/1:23,2:25:66.34:605,66,0	1/1:4,23:26:8.52:301,9,0	0/0:34,1:35:26.52:0,27,494	0/0:23,0:22:35.30:0,35,324	1/1:13,0:13:23.59:207,24,0	0/1:19,0:19:18.95:33,0,19	1/1:43,3:45:36.21:713,36,0	1/1:1,16:17:3.48:46,3,0	1/1:1,17:18:8.25:136,8,0	0/1:7,28:35:6.58:387,0,7	1/1:2,17:19:8.72:110,9,0	1/1:2,30:32:83.14:761,83,0	1/1:30,2:32:73.36:658,73,0	0/1:1,14:15:12.02:125,0,12
chr10	28001534	.	AAGC	A	13142.91	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=7.222;DP=371;FS=24.528;HRun=0;HaplotypeScore=59.5928;InbreedingCoeff=0.9680;MQ=75.40;MQ0=0;MQRankSum=-3.859;QD=41.86;ReadPosRankSum=0.519;VQSLOD=3.2071;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,19:20:51.15:840,51,0	1/1:0,5:5:15.05:256,15,0	0/0:11,0:11:24.61:0,25,581	0/0:9,0:9:20.66:0,21,403	1/1:0,11:11:21.03:327,21,0	1/1:2,17:19:36.12:614,36,0	1/1:0,10:10:15.05:256,15,0	1/1:3,21:24:63.19:1021,63,0	1/1:0,9:9:27.09:460,27,0	1/1:1,18:19:54.18:920,54,0	1/1:0,14:14:39.09:634,39,0	1/1:1,9:10:24.07:383,24,0	1/1:0,7:7:18.06:307,18,0	1/1:0,13:13:30.10:512,30,0	1/1:0,12:12:30.10:512,30,0	1/1:0,10:10:27.09:460,27,0	0/0:26,0:26:78.25:0,78,1750	0/0:11,0:11:33.11:0,33,745	1/1:0,6:6:17.80:268,18,0	1/1:3,20:23:60.08:930,60,0	1/1:0,5:5:15.05:256,15,0	1/1:0,9:9:27.05:429,27,0	1/1:1,13:14:26.97:460,27,0	1/1:0,9:9:21.07:358,21,0	1/1:0,22:22:54.18:921,54,0	1/1:1,21:22:63.20:1048,63,0	1/1:0,16:16:45.15:767,45,0	1/1:0,5:5:12.04:204,12,0
chr10	28002744	.	A	AACCCCAGTT	14597.13	PASS	AB=0.780;AC=52;AF=0.963;AN=54;BaseQRankSum=1.388;DP=246;FS=55.584;HRun=0;HaplotypeScore=268.7653;InbreedingCoeff=-0.0648;MQ=75.20;MQ0=1;MQRankSum=-3.933;QD=59.34;ReadPosRankSum=2.798;VQSLOD=2.6808;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:4:3.01:106,3,0	1/1:5,0:5:6.02:176,6,0	0/1:8,2:10:89.70:490,0,90	0/1:5,2:8:3.41:655,0,3	1/1:12,0:12:8.21:145,8,0	1/1:13,0:13:24.08:890,24,0	1/1:8,0:8:15.04:342,15,0	1/1:10,0:10:22.84:650,23,0	1/1:14,0:14:24.08:639,24,0	1/1:13,0:13:21.05:707,21,0	1/1:8,0:8:16.30:606,16,0	1/1:11,0:11:18.04:416,18,0	1/1:12,0:12:23.94:756,24,0	1/1:9,0:9:15.05:420,15,0	1/1:10,0:10:26.98:779,27,0	1/1:12,0:12:24.08:811,24,0	1/1:3,0:3:2.98:22,3,0	./.	1/1:13,0:13:30.10:1067,30,0	1/1:8,0:8:21:610,21,0	1/1:4,0:4:9.03:207,9,0	1/1:7,0:7:15.05:557,15,0	1/1:14,0:14:26.98:813,27,0	1/1:2,0:2:6.02:180,6,0	1/1:13,0:13:27.09:1007,27,0	1/1:8,0:8:15.05:527,15,0	1/1:11,0:11:24.08:794,24,0	1/1:3,0:3:6.02:226,6,0
chr10	28005097	.	C	CAAGTACTTT	46219.64	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-7.076;DP=564;FS=4.743;HRun=0;HaplotypeScore=127.5422;InbreedingCoeff=0.9734;MQ=71.50;MQ0=0;MQRankSum=-9.963;QD=90.63;ReadPosRankSum=2.660;VQSLOD=5.3049;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,6:13:21.07:887,21,0	1/1:3,4:10:18.06:746,18,0	0/0:18,0:18:31.03:0,31,1177	0/0:15,0:15:41.61:0,42,1026	1/1:8,17:27:60.12:2216,60,0	1/1:12,20:33:78.14:3122,78,0	1/1:14,15:29:63.22:2868,63,0	1/1:13,11:28:66.21:2324,66,0	1/1:7,11:18:42.14:1962,42,0	1/1:14,16:31:69.20:2796,69,0	1/1:8,17:25:60.08:2267,60,0	1/1:6,13:20:51.13:2195,51,0	1/1:7,18:27:69.24:3076,69,0	1/1:4,14:22:48.13:2030,48,0	1/1:6,19:26:66.10:2713,66,0	1/1:8,11:20:45.05:1696,45,0	0/0:7,0:7:18.06:0,18,490	0/0:14,0:14:23.34:0,23,649	1/1:6,3:9:18.06:725,18,0	1/1:10,19:29:78.15:2928,78,0	1/1:4,7:14:14.62:542,15,0	1/1:6,6:13:27.09:975,27,0	1/1:6,9:16:28.30:1052,28,0	1/1:5,5:10:15.05:638,15,0	1/1:7,15:23:63.13:2523,63,0	1/1:5,18:23:60.21:2731,60,0	1/1:12,17:30:69.15:2786,69,0	1/1:9,1:11:12.04:421,12,0
chr10	28005397	.	C	CCTTCTATCTTCT	61340.22	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-9.555;DP=738;FS=2.585;HRun=0;HaplotypeScore=177.6683;InbreedingCoeff=0.9199;MQ=63.40;MQ0=2;MQRankSum=-11.297;QD=99.10;ReadPosRankSum=4.678;VQSLOD=4.9072;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,7:17:35.61:1715,36,0	1/1:0,5:5:9.03:548,9,0	0/0:41,0:32:78.29:0,78,2285	0/0:41,0:38:72.18:0,72,2115	1/1:6,18:34:60.20:2593,60,0	1/1:7,33:48:99:5985,102,0	1/1:8,11:24:24.99:2340,25,0	1/1:10,11:29:72.25:3231,72,0	1/1:8,17:32:53.88:3151,54,0	1/1:6,17:31:81.09:3786,81,0	1/1:7,9:22:33.11:1448,33,0	1/1:5,11:21:36.12:2099,36,0	1/1:7,21:33:60.21:3234,60,0	1/1:7,19:33:51.18:2812,51,0	1/1:4,14:21:36.12:1961,36,0	1/1:2,19:25:51.18:3013,51,0	0/0:24,0:24:66.23:0,66,2205	0/0:12,0:12:27.09:0,27,945	1/1:6,5:16:45.14:1869,45,0	1/1:8,15:28:63.21:3056,63,0	1/1:9,2:17:18.06:972,18,0	1/1:3,21:30:51.17:2279,51,0	1/1:4,20:31:48.64:2787,49,0	1/1:4,11:23:4.80:1436,5,0	1/1:2,18:23:45.15:2688,45,0	1/1:8,17:32:87.26:3937,87,0	1/1:10,21:35:71.44:4036,71,0	1/1:2,4:6:6.02:365,6,0
chr10	28006382	.	G	GA	8241.09	PASS	AB=0.719;AC=45;AF=0.900;AN=50;BaseQRankSum=4.919;DP=483;FS=1.502;HRun=7;HaplotypeScore=147.7438;InbreedingCoeff=0.7853;MQ=37.31;MQ0=18;MQRankSum=-4.343;QD=19.08;ReadPosRankSum=-2.442;VQSLOD=2.7417;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:14,9:21:1.89:245,0,2	1/1:2,7:9:21.06:252,21,0	./.	./.	1/1:11,9:19:21.01:221,21,0	1/1:10,8:18:35.85:382,36,0	1/1:8,10:18:28.90:329,29,0	1/1:17,15:32:65.52:698,66,0	1/1:8,11:19:44.98:471,45,0	1/1:11,5:16:24.93:275,25,0	1/1:11,8:19:26.90:260,27,0	1/1:9,9:17:37.62:370,38,0	1/1:9,8:16:41.96:427,42,0	1/1:12,9:20:47.07:428,47,0	1/1:8,10:17:41.02:415,41,0	1/1:9,9:17:30.04:336,30,0	0/0:32,0:29:53.95:0,54,507	0/0:15,0:15:32.93:0,33,303	1/1:11,13:23:50.44:583,50,0	1/1:22,12:31:55.10:556,55,0	./.	1/1:3,7:10:18.03:201,18,0	1/1:11,9:15:30.25:312,30,0	1/1:8,2:10:14.82:138,15,0	1/1:6,15:21:45.14:538,45,0	1/1:9,8:16:10.09:375,10,0	1/1:18,9:25:16.97:371,17,0	1/1:2,1:3:6.87:58,7,0
chr10	28006394	.	C	CAA	5175.84	PASS	AB=0.777;AC=45;AF=0.804;AN=56;BaseQRankSum=1.164;DP=505;FS=11.442;HRun=15;HaplotypeScore=105.1554;InbreedingCoeff=0.4787;MQ=44.03;MQ0=15;MQRankSum=-5.115;QD=11.40;ReadPosRankSum=-1.859;VQSLOD=2.2286;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,7:22:34.49:287,34,0	1/1:7,2:9:12:133,12,0	0/1:3,0:1:0:0,0,0	0/0:5,0:4:6.62:0,7,32	0/1:11,10:24:13.18:217,0,13	0/1:8,11:22:0.25:213,0,0	1/1:8,3:16:15.83:135,16,0	1/1:22,7:32:54.66:538,55,0	0/1:15,0:16:27.08:146,0,27	1/1:11,4:18:23.52:184,24,0	1/1:14,5:20:26.35:246,26,0	1/1:14,3:17:30.43:296,30,0	1/1:9,3:21:16.79:161,17,0	1/1:18,3:21:14.06:230,14,0	1/1:13,5:22:10.87:159,11,0	1/1:8,9:18:20.28:182,20,0	0/0:25,0:28:38.22:0,38,329	0/0:15,0:15:25.96:0,26,190	1/1:14,9:24:35.48:343,35,0	1/1:13,11:27:47.78:432,48,0	1/1:2,0:1:0.89:2,1,0	1/1:8,3:10:17.97:189,18,0	1/1:16,3:15:0.14:170,0,0	1/1:5,1:9:8.43:61,8,0	1/1:16,2:20:18.74:173,19,0	1/1:13,8:21:29.45:283,29,0	0/1:13,9:22:0.93:243,0,1	1/1:1,4:6:15.01:154,15,0
chr10	28007054	.	CAA	C	14467.27	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=0.949;DP=577;FS=4.303;HRun=10;HaplotypeScore=75.9515;InbreedingCoeff=0.9871;MQ=77.45;MQ0=3;MQRankSum=-2.473;QD=27.50;ReadPosRankSum=4.507;VQSLOD=5.1851;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,19:19:51.14:566,51,0	1/1:0,13:13:36.10:399,36,0	0/0:10,0:12:17.13:0,17,189	0/0:13,0:14:13.01:0,13,278	1/1:2,26:28:74.86:836,75,0	1/1:2,22:24:66.18:736,66,0	1/1:0,10:10:27.07:301,27,0	1/1:6,28:35:78.07:897,78,0	1/1:4,19:23:50.86:547,51,0	1/1:3,27:30:81.22:903,81,0	1/1:4,20:24:60.15:665,60,0	1/1:5,14:17:39.10:435,39,0	1/1:3,7:10:21.05:234,21,0	1/1:1,16:18:47.86:514,48,0	1/1:2,31:33:93.24:1037,93,0	1/1:1,17:18:48.13:535,48,0	0/0:13,0:13:30.09:0,30,431	0/0:11,0:12:26.53:0,27,337	1/1:1,8:9:24.06:268,24,0	1/1:4,20:25:53.84:580,54,0	1/1:2,21:23:57.15:635,57,0	1/1:2,19:21:51.12:568,51,0	1/1:3,21:24:60.15:667,60,0	1/1:2,11:13:24.06:268,24,0	1/1:3,21:24:54.07:602,54,0	1/1:5,22:27:66.15:736,66,0	1/1:3,40:43:99:1137,102,0	1/1:0,12:12:36.10:401,36,0
chr10	28007704	.	A	AT	6917.35	PASS	AB=1.000;AC=51;AF=0.911;AN=56;BaseQRankSum=0.276;DP=330;FS=4.911;HRun=2;HaplotypeScore=55.8682;InbreedingCoeff=0.5595;MQ=72.28;MQ0=0;MQRankSum=-0.914;QD=22.46;ReadPosRankSum=4.172;VQSLOD=4.8354;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:23,2:25:64.89:612,65,0	1/1:6,0:6:12.01:114,12,0	0/0:11,0:10:1.39:0,1,90	0/0:10,0:8:9.14:0,9,111	1/1:16,1:17:38.98:367,39,0	1/1:14,1:15:39.05:383,39,0	1/1:7,0:7:15.02:140,15,0	1/1:20,1:20:59.98:559,60,0	1/1:7,0:7:15.02:142,15,0	1/1:13,0:13:39.05:380,39,0	1/1:10,1:11:29.89:268,30,0	1/1:7,0:7:9.01:85,9,0	1/1:8,0:8:21.03:211,21,0	1/1:11,0:11:18.03:171,18,0	1/1:12,0:12:27.04:256,27,0	1/1:11,0:11:15.02:141,15,0	0/1:19,0:19:54.84:67,0,55	1/1:7,0:7:10.85:34,11,0	1/1:6,0:6:17.50:143,17,0	1/1:11,0:11:26.76:221,27,0	1/1:14,0:14:36.04:340,36,0	1/1:5,0:5:14.98:138,15,0	1/1:9,0:9:21.02:199,21,0	1/1:10,0:10:24.02:225,24,0	1/1:10,1:11:23.94:230,24,0	1/1:1,18:19:57.17:786,57,0	1/1:2,16:18:33.11:450,33,0	1/1:0,8:8:18.06:257,18,0
chr10	28007706	.	T	TTA	11390.60	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-6.246;DP=343;FS=10.052;HRun=0;HaplotypeScore=48.6954;InbreedingCoeff=0.8773;MQ=73.45;MQ0=0;MQRankSum=1.460;QD=38.88;ReadPosRankSum=1.634;VQSLOD=6.3716;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,24:26:66.14:1245,66,0	1/1:0,6:6:12.04:242,12,0	0/0:12,0:11:3.91:0,4,122	0/0:10,0:8:8.93:0,9,134	1/1:1,17:18:41.95:682,42,0	1/1:1,12:13:39.07:742,39,0	1/1:1,7:8:15.05:299,15,0	1/1:2,21:23:69.05:1115,69,0	1/1:0,7:7:15.05:302,15,0	1/1:0,14:16:48.10:807,48,0	1/1:1,11:12:29.89:467,30,0	1/1:0,7:7:8.99:181,9,0	1/1:0,8:8:21.07:402,21,0	1/1:0,11:11:18.06:363,18,0	1/1:0,12:12:27.09:544,27,0	1/1:0,11:11:15.03:301,15,0	0/0:4,0:20:27.52:0,28,151	0/0:1,0:8:12.04:0,12,44	1/1:0,6:6:18.04:270,18,0	1/1:1,9:11:25.86:414,26,0	1/1:0,14:15:36.12:724,36,0	1/1:0,5:5:15.01:234,15,0	1/1:0,9:9:21.07:423,21,0	1/1:1,11:12:24.08:480,24,0	1/1:1,10:11:24.01:411,24,0	1/1:18,1:19:56.07:399,56,0	1/1:18,1:19:32.10:227,32,0	1/1:8,0:8:17.70:115,18,0
chr10	28007904	.	CA	C	11306.25	PASS	AB=1.000;AC=49;AF=0.875;AN=56;BaseQRankSum=3.903;DP=502;FS=6.779;HRun=3;HaplotypeScore=87.3853;InbreedingCoeff=0.8829;MQ=66.95;MQ0=2;MQRankSum=2.149;QD=25.07;ReadPosRankSum=1.838;VQSLOD=3.7056;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,34:35:90.18:905,90,0	1/1:0,5:5:12.02:121,12,0	0/0:24,0:10:15.62:0,16,139	0/1:14,0:9:1.82:2,0,55	1/1:4,24:28:62.07:732,62,0	1/1:3,21:24:69.07:676,69,0	1/1:1,10:11:30.06:302,30,0	1/1:17,27:43:99:1024,108,0	1/1:4,8:12:33.03:315,33,0	1/1:0,22:22:66.13:664,66,0	1/1:0,18:18:51.10:513,51,0	1/1:1,15:16:23.15:320,23,0	1/1:0,14:14:33.02:327,33,0	1/1:2,11:13:27.05:272,27,0	1/1:0,14:14:39.08:393,39,0	1/1:1,15:16:39.08:393,39,0	0/0:15,1:16:17.87:0,18,627	0/0:10,0:9:24.08:0,24,378	1/1:5,26:29:77.98:736,78,0	1/1:2,25:27:75:728,75,0	1/1:0,6:6:18.04:181,18,0	1/1:0,6:6:18.04:181,18,0	1/1:0,16:16:48.10:483,48,0	1/1:1,12:13:33.07:332,33,0	1/1:4,12:16:39.07:389,39,0	1/1:4,19:23:57.03:540,57,0	1/1:2,18:20:57.08:565,57,0	1/1:0,7:7:21.04:211,21,0
chr10	28009627	.	A	ACTACATCAAGCTTCACACACAAACACA	1628.58	PASS	AB=0.750;AC=24;AF=0.923;AN=26;BaseQRankSum=-2.261;DP=40;FS=0.000;HRun=0;HaplotypeScore=40.3461;InbreedingCoeff=-0.2001;MQ=85.68;MQ0=0;MQRankSum=0.144;QD=47.90;ReadPosRankSum=0.433;VQSLOD=1.2907;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:1,0:1:2.99:23,3,0	./.	0/1:4,1:5:2.42:489,0,2	0/1:4,0:6:14.12:384,0,14	1/1:2,0:2:6.02:170,6,0	./.	1/1:1,0:1:3:25,3,0	1/1:3,0:3:9.02:123,9,0	1/1:4,0:4:3.01:46,3,0	1/1:2,0:2:6.02:153,6,0	1/1:2,0:2:6:51,6,0	./.	./.	./.	./.	./.	./.	./.	./.	1/1:1,0:1:3.01:49,3,0	1/1:1,0:1:3.01:50,3,0	./.	1/1:2,0:2:6.01:75,6,0	./.	1/1:3,0:3:6:73,6,0	./.	./.	./.
chr10	28009681	.	G	GGA	2147.67	PASS	AB=0.667;AC=45;AF=0.900;AN=50;BaseQRankSum=-1.245;DP=210;FS=15.954;HRun=0;HaplotypeScore=106.9192;InbreedingCoeff=0.2859;MQ=40.01;MQ0=0;MQRankSum=-0.951;QD=11.67;ReadPosRankSum=-0.042;VQSLOD=2.5125;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	1/1:3,1:4:3.93:80,4,0	./.	0/0:15,0:3:3.35:0,3,17	1/1:7,4:11:0.44:1,0,0	1/1:3,5:8:11.39:119,11,0	1/1:3,5:8:8.34:62,8,0	1/1:4,4:8:20.90:218,21,0	0/1:5,5:10:9.30:20,0,9	1/1:6,3:9:6.96:128,7,0	1/1:2,2:4:0.89:2,1,0	1/1:4,1:5:5.50:34,5,0	1/1:3,3:6:8.75:142,9,0	1/1:5,6:10:5.80:61,6,0	1/1:2,6:8:12.41:93,12,0	1/1:4,7:11:3.08:149,3,0	0/0:1,0:1:2.74:0,3,12	./.	1/1:1,6:7:9.14:237,9,0	1/1:4,11:13:9.62:82,10,0	1/1:1,6:7:8.83:54,9,0	1/1:1,5:6:4.98:20,5,0	1/1:2,6:8:4.18:14,4,0	1/1:6,1:7:1.37:15,1,0	1/1:3,1:4:2.22:7,2,0	1/1:4,10:12:22.88:329,23,0	1/1:2,4:6:11.25:140,11,0	1/1:1,6:7:15.05:245,15,0
chr10	28009707	.	G	GGA	3034.39	PASS	AB=0.964;AC=47;AF=0.839;AN=56;BaseQRankSum=-3.852;DP=558;FS=0.000;HRun=0;HaplotypeScore=209.5000;InbreedingCoeff=0.3110;MQ=34.85;MQ0=17;MQRankSum=-0.118;QD=5.88;ReadPosRankSum=1.174;VQSLOD=2.6317;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:4:4.76:24,5,0	1/1:13,0:13:6.17:65,6,0	0/1:25,0:3:5.98:6,0,39	0/0:29,0:4:8.96:0,9,36	0/1:21,6:26:0.08:0,0,1	1/1:15,3:17:5.34:85,5,0	1/1:14,1:15:4.29:41,4,0	1/1:39,0:38:71.06:556,71,0	1/1:20,1:21:18.72:140,19,0	1/1:15,3:18:35.54:333,36,0	1/1:21,4:25:15.39:94,15,0	1/1:17,4:21:11.04:76,11,0	1/1:23,2:23:14.01:135,14,0	1/1:25,0:24:4.41:34,4,0	1/1:15,4:19:6.99:73,7,0	1/1:22,4:26:29.55:233,30,0	0/1:4,0:3:13.94:30,0,14	0/1:2,0:1:0:0,0,0	1/1:18,0:18:26.90:206,27,0	1/1:30,3:31:11.80:96,12,0	0/0:13,0:12:2.50:0,3,13	1/1:20,2:22:6.58:68,7,0	1/1:16,1:17:10.85:52,11,0	1/1:8,1:9:2.56:10,3,0	1/1:18,2:19:20.85:147,21,0	1/1:29,3:29:33.26:346,33,0	1/1:19,5:23:6.92:280,7,0	0/1:14,0:9:6.61:30,0,7
chr10	28009984	.	C	CTT	28345.35	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=7.000;DP=633;FS=3.990;HRun=2;HaplotypeScore=140.8900;InbreedingCoeff=0.9951;MQ=82.34;MQ0=0;MQRankSum=-9.234;QD=49.64;ReadPosRankSum=3.866;VQSLOD=4.8040;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,30:33:90.31:1686,90,0	1/1:1,5:6:15:243,15,0	0/0:17,0:17:45.14:0,45,620	0/0:24,0:24:59.79:0,60,837	1/1:1,32:34:96.29:1743,96,0	1/1:0,26:26:72.20:1312,72,0	1/1:3,19:23:59.83:1042,60,0	1/1:6,21:27:72.22:1266,72,0	1/1:3,15:18:45.15:842,45,0	1/1:0,27:28:78.25:1429,78,0	1/1:5,21:26:66.06:1092,66,0	1/1:2,16:18:45.11:792,45,0	1/1:2,25:27:75.14:1370,75,0	1/1:2,19:21:57.20:1068,57,0	1/1:1,22:23:66.23:1236,66,0	1/1:1,21:22:63.22:1180,63,0	0/0:12,0:12:36.11:0,36,511	0/0:9,0:9:27.09:0,27,398	1/1:1,11:12:36.11:639,36,0	1/1:2,29:31:81.16:1393,81,0	1/1:1,13:14:36.08:638,36,0	1/1:1,27:28:72.25:1346,72,0	1/1:0,29:29:87.30:1611,87,0	1/1:0,22:22:66.23:1236,66,0	1/1:1,26:27:75.26:1388,75,0	1/1:3,26:30:87.27:1542,87,0	1/1:6,23:29:78.23:1408,78,0	1/1:0,17:17:45.15:842,45,0
chr10	28010457	.	G	GCAGA	33790.51	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-2.003;DP=690;FS=5.283;HRun=0;HaplotypeScore=146.4961;InbreedingCoeff=0.9979;MQ=62.78;MQ0=1;MQRankSum=-2.792;QD=56.32;ReadPosRankSum=3.494;VQSLOD=6.5234;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,9:14:28.65:694,29,0	1/1:0,8:9:21.07:523,21,0	0/0:23,0:22:44.04:0,44,677	0/0:26,0:23:51.15:0,51,783	1/1:3,32:36:63.22:1626,63,0	1/1:7,29:37:72.25:1858,72,0	1/1:5,19:25:39.13:985,39,0	1/1:6,19:32:81.19:1547,81,0	1/1:3,22:27:66.23:1677,66,0	1/1:5,27:33:90.29:2087,90,0	1/1:2,21:25:48.16:1238,48,0	1/1:4,16:22:45.15:1153,45,0	1/1:5,21:27:57.20:1458,57,0	1/1:2,30:32:75.26:1906,75,0	1/1:3,18:21:42.14:1034,42,0	1/1:10,16:26:72.22:1672,72,0	0/0:25,0:25:70.10:0,70,1183	0/0:15,0:15:39.05:0,39,608	1/1:3,16:19:54.17:1337,54,0	1/1:4,36:41:96.80:2463,97,0	1/1:1,11:13:30.10:764,30,0	1/1:3,15:18:48.15:1169,48,0	1/1:3,35:38:68.98:1780,69,0	1/1:1,18:20:45.15:1153,45,0	1/1:5,12:17:45.15:1084,45,0	1/1:2,21:23:63.22:1624,63,0	1/1:4,32:36:96.33:2459,96,0	1/1:2,6:8:24.03:504,24,0
chr10	28012726	.	AT	A	22146.22	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=2.490;DP=614;FS=12.008;HRun=1;HaplotypeScore=74.1298;InbreedingCoeff=0.9961;MQ=79.55;MQ0=2;MQRankSum=-5.275;QD=39.76;ReadPosRankSum=4.739;VQSLOD=4.5384;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,12:12:36.08:479,36,0	1/1:0,11:11:33.11:460,33,0	0/0:16,0:16:48.16:0,48,727	0/0:13,0:13:32.83:0,33,452	1/1:0,33:33:93.22:1255,93,0	1/1:0,20:20:51.17:713,51,0	1/1:0,8:8:21.07:294,21,0	1/1:0,35:35:99:1465,105,0	1/1:0,17:17:48.16:669,48,0	1/1:0,36:36:99:1490,108,0	1/1:0,27:27:78.26:1091,78,0	1/1:0,7:7:18.06:252,18,0	1/1:0,28:28:78.26:1089,78,0	1/1:0,25:25:72.24:1007,72,0	1/1:0,26:26:75.25:1049,75,0	1/1:0,21:21:60.20:839,60,0	0/0:14,0:14:39.13:0,39,614	0/0:14,0:14:39.06:0,39,562	1/1:0,15:15:45.15:627,45,0	1/1:0,44:44:99:1737,126,0	1/1:0,20:20:60.20:836,60,0	1/1:0,24:24:69.23:965,69,0	1/1:1,39:39:99:1637,117,0	1/1:1,11:11:33.11:460,33,0	1/1:0,22:22:63.21:881,63,0	1/1:0,27:27:81.27:1131,81,0	1/1:0,37:37:96.32:1342,96,0	1/1:0,10:10:27.09:377,27,0
chr10	28012918	.	T	TTG	22456.31	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=5.573;DP=547;FS=0.000;HRun=0;HaplotypeScore=104.4797;InbreedingCoeff=0.9967;MQ=93.63;MQ0=0;MQRankSum=-6.775;QD=48.09;ReadPosRankSum=4.969;VQSLOD=6.0806;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,20:21:54.19:1010,54,0	1/1:0,12:12:27.09:505,27,0	0/0:26,0:26:75.22:0,75,1059	0/0:21,0:21:54.13:0,54,712	1/1:1,24:25:69.24:1290,69,0	1/1:1,24:25:69.24:1291,69,0	1/1:1,16:16:42.14:783,42,0	1/1:3,35:38:99:1759,105,0	1/1:0,11:11:21.07:393,21,0	1/1:1,21:22:63.21:1138,63,0	1/1:2,19:21:51.17:955,51,0	1/1:1,7:8:24.08:430,24,0	1/1:0,23:23:63.22:1178,63,0	1/1:1,18:20:51.17:955,51,0	1/1:0,22:22:60.21:1124,60,0	1/1:1,15:16:36.12:674,36,0	0/0:13,0:13:39.10:0,39,533	0/0:20,0:20:57.16:0,57,813	1/1:1,16:17:48.08:702,48,0	1/1:1,22:24:69.24:1271,69,0	1/1:1,12:13:33.11:618,33,0	1/1:0,14:16:42.14:786,42,0	1/1:0,18:18:45.15:842,45,0	1/1:0,17:18:45.15:842,45,0	1/1:0,23:23:60.21:1124,60,0	1/1:1,21:22:66.23:1216,66,0	1/1:0,24:24:63.22:1179,63,0	1/1:3,8:11:21.07:393,21,0
chr10	28013562	.	CGTG	C	21885.23	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=11.279;DP=606;FS=1.797;HRun=0;HaplotypeScore=170.1845;InbreedingCoeff=0.9517;MQ=81.91;MQ0=0;MQRankSum=-13.124;QD=44.39;ReadPosRankSum=1.904;VQSLOD=6.2572;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,30:30:57.20:1058,57,0	1/1:0,9:9:24:406,24,0	0/0:21,0:22:51.06:0,51,1049	0/0:29,0:29:60.06:0,60,1575	1/1:1,25:26:51.17:911,51,0	1/1:0,20:20:48.16:891,48,0	1/1:0,24:24:60.21:1114,60,0	1/1:0,21:21:63.16:1046,63,0	1/1:0,25:25:66.23:1224,66,0	1/1:0,27:27:81.25:1429,81,0	1/1:1,14:15:30.57:547,31,0	1/1:0,22:22:60.21:1115,60,0	1/1:0,21:21:51.17:936,51,0	1/1:0,17:17:41.71:778,42,0	1/1:1,26:27:69.24:1274,69,0	1/1:0,17:17:39.13:725,39,0	0/0:41,0:41:99:0,123,3020	0/0:21,0:21:63.20:0,63,1491	1/1:0,24:24:72.23:1288,72,0	1/1:1,16:17:48.16:881,48,0	1/1:0,11:11:24.08:446,24,0	1/1:0,22:22:42.14:780,42,0	1/1:0,22:22:35.52:668,36,0	1/1:0,20:20:33.11:613,33,0	1/1:0,25:25:63.22:1161,63,0	1/1:0,19:19:57.19:1031,57,0	1/1:0,31:31:81.14:1506,81,0	1/1:0,1:1:3.01:56,3,0
chr10	28013565	.	G	GC	6014.35	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=13.771;DP=634;FS=4.214;HRun=0;HaplotypeScore=215.7258;InbreedingCoeff=0.9498;MQ=81.35;MQ0=0;MQRankSum=-13.133;QD=11.59;ReadPosRankSum=2.106;VQSLOD=5.1355;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:32,0:32:51.22:218,51,0	1/1:9,0:9:18.29:76,18,0	0/0:24,0:24:56.85:0,57,706	0/0:30,0:30:72.86:0,73,915	1/1:27,1:28:45.74:278,46,0	1/1:21,0:21:43.38:191,43,0	1/1:24,0:24:54.39:244,54,0	1/1:27,0:27:63.32:414,63,0	1/1:26,0:26:62.79:325,63,0	1/1:29,0:29:78.17:524,78,0	1/1:15,1:16:26.96:170,27,0	1/1:23,0:23:55.75:279,56,0	1/1:22,0:22:46.46:241,46,0	1/1:17,0:17:37.86:171,38,0	1/1:26,1:27:63.32:323,63,0	1/1:17,0:17:35.87:168,36,0	0/0:41,0:41:99:0,123,1719	0/0:20,0:20:60.20:0,60,839	1/1:25,0:25:69.30:461,69,0	1/1:16,1:17:44.78:253,45,0	1/1:13,0:13:21.90:99,22,0	1/1:23,0:23:38.62:185,39,0	1/1:22,0:22:31.78:149,32,0	1/1:23,0:23:32.73:158,33,0	1/1:25,0:25:57.90:299,58,0	1/1:19,0:19:52.39:327,52,0	1/1:33,0:33:79.54:446,80,0	1/1:1,0:1:2.88:15,3,0
chr10	28014503	.	G	GT	19133.46	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-3.941;DP=603;FS=7.167;HRun=4;HaplotypeScore=88.2905;InbreedingCoeff=0.9955;MQ=87.71;MQ0=0;MQRankSum=-7.092;QD=36.38;ReadPosRankSum=2.987;VQSLOD=4.9247;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,15:16:47.64:624,48,0	1/1:2,17:19:54.18:734,54,0	0/0:23,0:23:63.16:0,63,699	0/0:21,0:21:45.18:0,45,587	1/1:0,29:29:87.25:1169,87,0	1/1:1,22:23:57.19:780,57,0	1/1:2,26:28:69.23:943,69,0	1/1:3,18:21:54.16:721,54,0	1/1:1,23:24:69.23:934,69,0	1/1:3,17:20:48.16:656,48,0	1/1:1,21:22:63.21:862,63,0	1/1:1,21:22:54.18:739,54,0	1/1:1,15:16:45.15:616,45,0	1/1:2,20:22:54.17:724,54,0	1/1:0,13:13:39.13:534,39,0	1/1:1,22:22:57.19:780,57,0	0/0:19,0:19:51.14:0,51,579	0/0:14,0:14:36.10:0,36,408	1/1:1,19:20:57.18:758,57,0	1/1:3,42:45:99:1618,123,0	1/1:1,12:13:36.11:476,36,0	1/1:4,23:27:72.24:975,72,0	1/1:1,22:23:60.16:800,60,0	1/1:1,14:15:42.14:575,42,0	1/1:3,17:20:48.16:656,48,0	1/1:0,26:26:78.26:1067,78,0	1/1:2,30:32:87.29:1189,87,0	1/1:1,6:7:15.05:205,15,0
chr10	28015301	.	A	AT	23695.57	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=5.476;DP=704;FS=1.576;HRun=2;HaplotypeScore=160.4296;InbreedingCoeff=0.9952;MQ=81.10;MQ0=0;MQRankSum=-8.036;QD=37.43;ReadPosRankSum=3.690;VQSLOD=4.3517;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,24:25:69.19:970,69,0	1/1:2,10:12:30.10:432,30,0	0/0:28,0:28:84.26:0,84,1037	0/0:19,0:18:42.11:0,42,491	1/1:0,35:35:99:1285,99,0	1/1:3,23:25:63.13:860,63,0	1/1:3,17:20:48.12:668,48,0	1/1:5,22:27:69.23:989,69,0	1/1:2,22:24:66.14:904,66,0	1/1:1,22:23:66.21:926,66,0	1/1:1,20:21:51.17:734,51,0	1/1:3,29:32:87.22:1208,87,0	1/1:1,37:38:99:1552,108,0	1/1:4,26:30:81.20:1120,81,0	1/1:4,29:33:87.22:1208,87,0	1/1:0,23:23:69.23:993,69,0	0/0:13,0:13:39.12:0,39,483	0/0:11,0:11:30.09:0,30,371	1/1:4,26:30:81.22:1099,81,0	1/1:3,35:38:99:1465,105,0	1/1:1,14:15:36.12:518,36,0	1/1:1,24:25:69.15:946,69,0	1/1:1,18:19:51.16:734,51,0	1/1:2,21:23:57.15:797,57,0	1/1:3,36:39:99:1417,102,0	1/1:2,35:37:99:1511,105,0	1/1:4,28:31:81.25:1144,81,0	1/1:0,5:5:15.05:216,15,0
chr10	28015466	.	GA	G	13962.22	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=0.577;DP=682;FS=12.459;HRun=9;HaplotypeScore=80.3208;InbreedingCoeff=0.9942;MQ=76.05;MQ0=0;MQRankSum=-3.254;QD=23.31;ReadPosRankSum=5.180;VQSLOD=4.5684;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,18:23:48.02:439,48,0	1/1:1,12:13:30.01:275,30,0	0/0:25,0:25:39.25:0,39,453	0/0:20,0:19:30.22:0,30,374	1/1:9,29:38:93.05:851,93,0	1/1:2,26:28:75.04:686,75,0	1/1:2,20:22:54.03:494,54,0	1/1:5,32:37:96.04:872,96,0	1/1:2,21:23:60.03:549,60,0	1/1:1,24:25:72.03:655,72,0	1/1:4,16:20:51.03:467,51,0	1/1:2,21:23:57.03:522,57,0	1/1:4,32:36:93.04:851,93,0	1/1:3,19:22:54.02:494,54,0	1/1:2,23:25:60.03:549,60,0	1/1:2,19:21:57.03:522,57,0	0/0:16,0:16:48.11:0,48,540	0/0:21,0:21:48.07:0,48,520	1/1:2,17:19:51.01:463,51,0	1/1:0,29:29:84.04:768,84,0	1/1:1,19:20:51.03:467,51,0	1/1:5,23:28:72.03:659,72,0	1/1:1,22:23:56.98:521,57,0	1/1:3,18:21:54.03:494,54,0	1/1:1,22:23:60.03:549,60,0	1/1:5,35:40:99:982,108,0	1/1:4,29:33:74.91:674,75,0	1/1:1,6:7:14.06:159,14,0
chr10	28015855	.	AC	A	8389.96	PASS	AB=1.000;AC=53;AF=0.946;AN=56;BaseQRankSum=-5.460;DP=455;FS=4.931;HRun=10;HaplotypeScore=53.0505;InbreedingCoeff=0.6207;MQ=78.93;MQ0=0;MQRankSum=-3.635;QD=19.07;ReadPosRankSum=5.001;VQSLOD=5.3788;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,16:19:41.93:361,42,0	1/1:0,10:11:31.99:259,32,0	0/0:14,1:14:4.44:0,4,243	0/1:14,0:14:0.27:0,0,145	1/1:9,14:22:32.31:279,32,0	1/1:1,13:15:38.03:318,38,0	1/1:2,16:18:47.99:417,48,0	1/1:10,17:27:50.96:439,51,0	1/1:4,16:20:38.99:338,39,0	1/1:5,18:23:50.98:441,51,0	1/1:3,12:15:41.99:364,42,0	1/1:0,20:20:53.99:468,54,0	1/1:3,14:17:41.98:364,42,0	1/1:1,15:16:35.99:312,36,0	1/1:4,8:12:10.20:214,10,0	1/1:1,14:15:44.99:390,45,0	1/1:5,19:24:53.96:467,54,0	1/1:0,4:4:9:78,9,0	1/1:5,4:9:14.99:129,15,0	1/1:6,21:27:56.98:494,57,0	1/1:2,10:12:29.99:260,30,0	1/1:2,13:15:38.94:331,39,0	1/1:5,7:12:3.26:161,3,0	1/1:2,13:15:32.98:286,33,0	1/1:0,13:13:38.99:338,39,0	1/1:3,9:12:29.96:253,30,0	1/1:5,13:18:35.98:312,36,0	1/1:0,13:13:35.99:312,36,0
chr10	28015961	.	TC	T	15218.09	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=6.335;DP=562;FS=9.758;HRun=4;HaplotypeScore=60.0655;InbreedingCoeff=0.9869;MQ=85.25;MQ0=0;MQRankSum=-6.510;QD=31.77;ReadPosRankSum=4.114;VQSLOD=4.9687;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,22:22:66.20:791,66,0	1/1:0,7:7:15.05:180,15,0	0/0:27,0:26:64.47:0,64,866	0/0:20,0:20:46.14:0,46,645	1/1:1,17:18:51.02:575,51,0	1/1:0,24:24:69.21:827,69,0	1/1:0,13:13:30.09:360,30,0	1/1:2,22:24:66.15:746,66,0	1/1:0,25:25:72.22:863,72,0	1/1:2,18:20:48.13:565,48,0	1/1:0,20:20:57.07:649,57,0	1/1:0,21:21:63.19:755,63,0	1/1:0,22:22:63.19:755,63,0	1/1:0,16:16:42.13:504,42,0	1/1:2,22:24:63.19:756,63,0	1/1:0,24:24:48.15:576,48,0	0/0:23,0:23:66.21:0,66,907	0/0:13,0:13:36.09:0,36,482	1/1:5,20:25:60.14:684,60,0	1/1:0,26:26:78.07:882,78,0	1/1:0,23:23:63.19:756,63,0	1/1:0,19:19:51.07:579,51,0	1/1:0,20:20:60.18:715,60,0	1/1:0,23:23:60.18:720,60,0	1/1:0,17:17:45.14:539,45,0	1/1:1,17:18:51.12:578,51,0	1/1:1,22:23:60.18:719,60,0	1/1:0,4:4:12.04:144,12,0
chr10	28017218	.	A	AAC	30278.22	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-12.925;DP=718;FS=0.000;HRun=0;HaplotypeScore=72.4685;InbreedingCoeff=0.9918;MQ=84.11;MQ0=4;MQRankSum=-6.752;QD=48.21;ReadPosRankSum=5.921;VQSLOD=6.1462;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,46:46:99:2432,126,0	1/1:1,10:11:27.09:521,27,0	0/0:25,0:25:75.22:0,75,1087	0/0:22,0:22:58.49:0,58,803	1/1:0,27:29:75.26:1443,75,0	1/1:2,23:25:69.24:1333,69,0	1/1:2,19:21:42.14:812,42,0	1/1:2,25:27:75.24:1396,75,0	1/1:0,26:26:69.24:1332,69,0	1/1:1,23:24:69.22:1286,69,0	1/1:1,12:13:33.11:637,33,0	1/1:2,28:30:75.26:1448,75,0	1/1:1,36:39:96.33:1853,96,0	1/1:2,28:30:75.26:1438,75,0	1/1:1,32:33:78.27:1506,78,0	1/1:0,33:34:78.27:1507,78,0	0/0:26,0:26:78.24:0,78,1168	0/0:17,0:17:51.16:0,51,758	1/1:2,23:24:72.25:1342,72,0	1/1:0,19:19:48.16:867,48,0	1/1:0,29:30:63.22:1217,63,0	1/1:1,22:26:66.12:1231,66,0	1/1:0,27:27:69.23:1332,69,0	1/1:3,28:32:81.28:1564,81,0	1/1:1,10:10:24.08:464,24,0	1/1:0,27:27:75.26:1419,75,0	1/1:1,29:29:77.93:1503,78,0	1/1:2,9:11:12.76:394,13,0
chr10	28017638	.	C	CAGA	15231.65	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-3.648;DP=315;FS=84.833;HRun=0;HaplotypeScore=53.3459;InbreedingCoeff=0.9498;MQ=98.67;MQ0=0;MQRankSum=-6.922;QD=61.17;ReadPosRankSum=4.405;VQSLOD=1.2784;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,15:16:42.14:961,42,0	1/1:0,4:5:12.04:277,12,0	0/0:19,0:19:51.12:0,51,781	0/0:20,0:21:44.62:0,45,755	1/1:0,8:8:21.07:479,21,0	1/1:0,4:4:12.04:277,12,0	1/1:0,6:7:18.06:414,18,0	1/1:1,15:17:45.09:777,45,0	1/1:0,12:13:33.11:760,33,0	1/1:0,7:7:21.07:483,21,0	1/1:0,9:9:27.09:619,27,0	1/1:0,16:18:45.15:1035,45,0	1/1:0,10:12:27.09:618,27,0	1/1:0,9:9:27.09:616,27,0	1/1:0,7:7:21.07:484,21,0	1/1:0,6:6:18.06:414,18,0	0/0:13,0:13:36.12:0,36,614	0/0:13,0:13:33.10:0,33,536	1/1:1,5:7:9.08:343,9,0	1/1:0,17:17:48.16:1106,48,0	1/1:0,12:13:36.12:826,36,0	1/1:0,9:9:24.08:550,24,0	1/1:0,11:11:33.11:760,33,0	1/1:1,19:20:54.19:1244,54,0	1/1:0,10:10:27.09:622,27,0	1/1:0,8:9:27.05:531,27,0	1/1:0,11:10:33.11:759,33,0	1/1:0,4:4:12.04:277,12,0
chr10	28022413	.	G	GA	16933.79	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-7.621;DP=620;FS=2.679;HRun=8;HaplotypeScore=57.0838;InbreedingCoeff=0.9755;MQ=82.27;MQ0=0;MQRankSum=-7.784;QD=29.00;ReadPosRankSum=5.221;VQSLOD=4.6419;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,16:22:53.75:554,54,0	1/1:0,7:7:18.05:208,18,0	0/0:19,0:19:38.88:0,39,340	0/0:17,0:17:32.79:0,33,293	1/1:3,24:27:72.17:816,72,0	1/1:5,25:30:75.22:866,75,0	1/1:0,10:11:33.09:371,33,0	1/1:7,26:33:75.21:856,75,0	1/1:1,11:13:35.94:395,36,0	1/1:8,27:35:81.23:925,81,0	1/1:5,18:23:51.15:589,51,0	1/1:1,14:15:39.12:450,39,0	1/1:2,26:28:69.21:796,69,0	1/1:1,15:16:42.12:485,42,0	1/1:1,28:29:75.22:866,75,0	1/1:2,20:22:54.16:623,54,0	1/1:2,14:16:31.29:378,31,0	1/1:3,15:18:45.08:504,45,0	1/1:5,20:25:60.18:692,60,0	1/1:2,36:38:99:1104,102,0	1/1:0,10:10:30.09:346,30,0	1/1:1,31:32:90.27:1039,90,0	1/1:1,35:36:99:1171,102,0	1/1:0,7:7:18.05:208,18,0	1/1:2,17:19:48.14:554,48,0	1/1:3,23:26:72.21:823,72,0	1/1:5,37:42:99:1177,102,0	1/1:0,4:4:12.04:138,12,0
chr10	28024829	.	GAT	G	5379.74	PASS	AB=0.971;AC=46;AF=0.821;AN=56;BaseQRankSum=2.327;DP=503;FS=7.847;HRun=0;HaplotypeScore=116.4772;InbreedingCoeff=0.5425;MQ=57.90;MQ0=14;MQRankSum=3.398;QD=14.50;ReadPosRankSum=0.000;VQSLOD=4.3664;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:21,1:19:32.51:263,33,0	1/1:1,0:1:3:25,3,0	0/0:43,0:9:14.96:0,15,136	0/0:64,0:24:18.82:0,19,452	1/1:3,18:21:2.84:36,3,0	1/1:18,1:19:34.50:277,35,0	1/1:11,0:11:15.27:117,15,0	1/1:18,0:18:41.79:335,42,0	1/1:16,3:19:47.77:380,48,0	1/1:12,0:12:1.95:117,2,0	1/1:17,0:16:20.97:174,21,0	1/1:21,2:23:61.80:464,62,0	1/1:14,1:15:31.07:231,31,0	0/1:15,1:16:20.08:191,0,20	1/1:22,1:23:48.30:392,48,0	1/1:13,2:15:32.93:272,33,0	0/0:13,0:12:0.80:0,1,332	0/0:10,0:10:20.81:0,21,429	1/1:10,0:10:24.15:202,24,0	1/1:9,0:9:11.99:109,12,0	1/1:19,0:19:21.36:168,21,0	1/1:7,0:7:6.88:52,7,0	1/1:3,6:9:2.99:24,3,0	1/1:21,1:22:44.15:330,44,0	1/1:22,1:23:44.90:367,45,0	1/1:17,1:18:51.34:444,51,0	1/1:13,5:18:45.27:372,45,0	0/1:4,0:4:8.92:38,0,9
chr10	28024837	.	GAGAA	G	4880.68	PASS	AB=1.000;AC=41;AF=0.759;AN=54;BaseQRankSum=1.023;DP=508;FS=4.244;HRun=0;HaplotypeScore=126.7926;InbreedingCoeff=0.1956;MQ=55.23;MQ0=15;MQRankSum=2.255;QD=11.57;ReadPosRankSum=-2.218;VQSLOD=4.0431;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:20:10.79:258,11,0	./.	0/1:39,0:7:11.23:11,0,21	0/0:59,0:21:6.37:0,6,159	0/0:15,1:16:2.22:0,2,7	1/1:18,0:18:27.06:236,27,0	1/1:16,0:16:24.85:207,25,0	1/1:13,0:13:30.35:191,30,0	1/1:21,0:21:47.70:427,48,0	0/1:15,0:15:67.51:86,0,68	0/1:17,0:16:9.97:83,0,10	1/1:22,0:22:56.77:522,57,0	1/1:19,0:19:33.56:230,34,0	0/1:21,0:21:79.86:128,0,80	1/1:20,1:21:39.42:339,39,0	1/1:20,1:21:38.10:351,38,0	0/1:16,0:15:11.16:11,0,158	0/0:9,0:9:11.85:0,12,227	1/1:10,0:10:21:215,21,0	1/1:8,0:8:8.98:72,9,0	1/1:20,0:20:18.26:138,18,0	1/1:7,0:7:8.99:74,9,0	1/1:10,0:10:5.97:46,6,0	0/1:22,0:22:16.33:193,0,16	1/1:23,0:23:36.04:297,36,0	1/1:18,0:18:7.69:283,8,0	1/1:16,1:17:44.66:427,45,0	0/1:4,0:4:6.80:55,0,7
chr10	28024839	.	GAA	G	5265.49	PASS	AB=1.000;AC=46;AF=0.852;AN=54;BaseQRankSum=0.658;DP=506;FS=10.635;HRun=3;HaplotypeScore=115.9984;InbreedingCoeff=0.5225;MQ=55.16;MQ0=16;MQRankSum=2.469;QD=13.16;ReadPosRankSum=-0.255;VQSLOD=0.9100;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:23,1:20:29.98:238,30,0	./.	0/0:40,0:7:4.70:0,5,32	0/0:55,0:19:8.32:0,8,168	1/1:12,1:13:2.84:36,3,0	1/1:19,0:19:31.17:252,31,0	1/1:16,0:16:21.62:170,22,0	1/1:13,0:13:35.50:231,35,0	1/1:20,1:21:48.15:376,48,0	1/1:15,0:15:8.20:175,8,0	1/1:17,0:16:13.68:105,14,0	1/1:20,2:22:56.68:434,57,0	1/1:18,1:19:33.56:229,34,0	0/1:21,0:21:13.30:234,0,13	1/1:21,0:21:41.43:341,41,0	1/1:21,1:22:50.55:412,51,0	0/1:15,0:14:62.62:63,0,115	0/0:9,0:9:14.55:0,15,186	1/1:10,0:10:21.14:173,21,0	1/1:8,0:8:8.98:72,9,0	1/1:20,0:20:18.21:138,18,0	1/1:8,0:8:8.99:74,9,0	1/1:10,0:10:5.97:46,6,0	1/1:19,1:20:35.83:317,36,0	1/1:24,1:25:38.09:320,38,0	1/1:19,0:18:51.17:408,51,0	1/1:15,3:18:45.12:365,45,0	1/1:4,0:4:8.69:55,9,0
chr10	28025414	.	C	CAT	767.41	PASS	AB=0.845;AC=12;AF=0.214;AN=56;BaseQRankSum=3.405;DP=799;FS=15.267;HRun=0;HaplotypeScore=184.4742;InbreedingCoeff=-0.2854;MQ=47.86;MQ0=21;MQRankSum=-1.653;QD=1.89;ReadPosRankSum=3.916;VQSLOD=1.7824;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:22,14:37:33.86:34,0,133	0/0:7,2:10:17.98:0,18,149	0/0:17,0:8:17.78:0,18,150	0/0:17,0:4:6.01:0,6,71	0/0:16,8:25:27.06:0,27,214	0/1:32,4:34:55.01:55,0,128	0/0:17,6:22:10.55:0,11,91	0/1:62,0:51:99:136,0,466	0/0:16,8:25:27.74:0,28,222	0/1:37,1:39:72.07:72,0,370	0/0:14,0:22:27.69:0,28,223	0/0:29,10:38:37.35:0,37,303	0/1:20,14:30:55.54:56,0,198	0/1:13,13:26:20.16:20,0,228	0/0:18,21:39:38.48:0,38,314	0/0:25,7:31:37.56:0,38,292	0/1:26,0:25:7.91:8,0,206	0/0:15,0:15:15.04:0,15,102	0/1:17,0:17:11.08:11,0,174	0/0:20,11:32:21.86:0,22,157	0/0:28,0:26:11.78:0,12,137	0/0:20,12:31:23.95:0,24,190	0/1:23,3:26:33.73:34,0,160	0/1:20,13:34:15.38:15,0,246	0/0:21,7:29:25.85:0,26,223	0/1:27,4:31:99:417,0,289	0/1:23,10:33:57.48:57,0,238	0/0:7,0:6:4.35:0,4,27
chr10	28027960	.	C	CATGTATGT	436.03	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=-2.421;DP=385;FS=0.000;HRun=0;HaplotypeScore=117.7934;InbreedingCoeff=0.5164;MQ=64.98;MQ0=6;MQRankSum=-2.349;QD=9.48;ReadPosRankSum=-1.701;VQSLOD=1.6987;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:27.09:0,27,681	0/0:7,0:7:15.05:0,15,374	0/1:23,0:11:15.18:15,0,254	0/0:23,0:8:6.03:0,6,106	0/0:8,0:8:21.07:0,21,500	0/0:25,0:25:39.12:0,39,940	0/0:13,0:13:33.11:0,33,785	0/0:37,0:37:48.10:0,48,755	0/0:10,0:10:24.07:0,24,523	0/0:17,0:17:45.15:0,45,1139	0/0:16,0:16:42.14:0,42,1002	0/0:22,0:22:54.19:0,54,1369	0/0:6,0:6:15.05:0,15,347	0/0:15,0:15:39.13:0,39,945	0/0:9,0:9:21.06:0,21,483	0/0:16,0:16:33.10:0,33,753	1/1:12,2:15:3.01:124,3,0	1/1:3,5:8:12.04:408,12,0	0/0:20,0:19:36.12:0,36,867	0/0:7,0:7:18.06:0,18,422	0/0:7,0:7:18.03:0,18,354	0/0:2,0:2:6.01:0,6,97	0/0:2,0:2:6.01:0,6,101	0/0:2,0:2:3.01:0,3,76	0/0:16,0:16:33.08:0,33,728	0/0:17,0:17:39.12:0,39,928	0/0:22,0:22:48.16:0,48,1163	0/0:7,0:7:12.04:0,12,305
chr10	28028540	.	G	GACAC	7674.69	PASS	AB=0.738;AC=44;AF=0.846;AN=52;BaseQRankSum=-2.792;DP=682;FS=4.285;HRun=0;HaplotypeScore=140.9592;InbreedingCoeff=-0.2013;MQ=67.72;MQ0=11;MQRankSum=1.665;QD=12.28;ReadPosRankSum=0.056;VQSLOD=4.3607;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:21,17:43:2.68:202,0,3	1/1:2,3:6:7.58:147,8,0	./.	./.	1/1:14,4:26:29.30:431,29,0	0/1:19,0:20:65.83:255,0,66	1/1:9,7:16:9.24:155,9,0	1/1:28,0:28:26.67:217,27,0	1/1:10,6:18:14.52:238,15,0	1/1:21,13:34:49.01:583,49,0	1/1:12,4:20:7.79:89,8,0	0/1:13,9:27:27.28:280,0,27	1/1:10,9:21:17.80:354,18,0	1/1:9,8:19:12:233,12,0	1/1:14,15:32:0.49:850,0,0	0/1:12,13:27:26.85:332,0,27	1/1:20,10:32:12.03:201,12,0	0/1:11,0:11:3.49:104,0,3	1/1:13,0:17:15.44:137,15,0	1/1:13,13:27:6.02:142,6,0	1/1:35,0:37:42.10:520,42,0	1/1:6,9:16:12.04:231,12,0	0/1:7,10:19:35.39:143,0,35	1/1:17,17:35:27.09:640,27,0	0/1:14,9:26:23.91:293,0,24	1/1:15,13:30:29.16:581,29,0	0/1:14,10:25:11.91:134,0,12	1/1:1,5:8:9.03:182,9,0
chr10	28034116	.	A	AACACACACAC	4455.25	PASS	AB=0.840;AC=47;AF=0.904;AN=52;BaseQRankSum=-0.077;DP=480;FS=0.000;HRun=0;HaplotypeScore=170.6930;InbreedingCoeff=0.2505;MQ=56.16;MQ0=8;MQRankSum=-2.855;QD=11.03;ReadPosRankSum=-1.867;VQSLOD=3.2914;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:31,0:30:6.64:88,7,0	1/1:6,0:6:2.58:111,3,0	./.	./.	1/1:25,0:25:8.79:305,9,0	1/1:19,1:20:3.42:148,3,0	0/1:17,0:20:21.74:51,0,22	1/1:15,0:13:5.88:27,6,0	1/1:16,0:16:12.02:283,12,0	1/1:18,0:17:24.05:594,24,0	1/1:19,1:20:2.92:147,3,0	1/1:15,0:15:2.77:145,3,0	1/1:10,1:10:8.96:309,9,0	1/1:13,0:13:2.95:22,3,0	1/1:13,2:15:3.01:148,3,0	1/1:12,0:13:9.03:340,9,0	0/0:15,0:15:9.03:0,9,264	0/0:19,0:18:18.04:0,18,447	1/1:13,0:12:8.99:116,9,0	1/1:18,0:18:3.02:148,3,0	1/1:18,0:15:8.55:121,9,0	1/1:13,0:13:6.02:194,6,0	1/1:15,0:15:2.98:22,3,0	1/1:17,0:15:8.56:90,9,0	1/1:15,3:19:3.01:144,3,0	1/1:21,0:21:10.28:262,10,0	1/1:14,2:17:5.89:226,6,0	1/1:6,1:6:8.57:413,9,0
chr10	28034834	.	GTT	G	14373.44	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=2.225;DP=578;FS=3.187;HRun=10;HaplotypeScore=82.1742;InbreedingCoeff=0.9941;MQ=75.80;MQ0=1;MQRankSum=-2.923;QD=28.63;ReadPosRankSum=3.219;VQSLOD=5.3854;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,24:26:57.10:622,57,0	1/1:0,7:7:21.06:234,21,0	0/0:22,0:21:26.24:0,26,387	0/0:12,0:10:20.97:0,21,262	1/1:1,30:31:81.20:903,81,0	1/1:2,29:31:81.21:903,81,0	1/1:1,6:7:18.05:201,18,0	1/1:4,37:41:99:1180,111,0	1/1:2,18:20:48.12:535,48,0	1/1:3,21:24:63.16:701,63,0	1/1:2,28:30:81.19:901,81,0	1/1:2,9:11:27.06:301,27,0	1/1:2,27:29:78.07:851,78,0	1/1:1,16:17:45.12:501,45,0	1/1:1,18:19:48.13:535,48,0	1/1:3,27:30:75.19:836,75,0	0/0:23,0:26:67.69:0,68,963	0/0:16,0:16:48.13:0,48,711	1/1:4,9:13:27.06:301,27,0	1/1:0,23:23:69.19:769,69,0	1/1:4,14:17:36.09:401,36,0	1/1:0,18:18:54.15:601,54,0	1/1:0,19:19:51.14:568,51,0	1/1:0,9:9:27.07:301,27,0	1/1:1,13:14:39.10:434,39,0	1/1:3,24:28:69.14:758,69,0	1/1:3,24:27:63.16:702,63,0	1/1:0,10:10:30.08:334,30,0
chr10	28035853	.	AG	A	20489.38	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=9.186;DP=604;FS=9.045;HRun=1;HaplotypeScore=123.5856;InbreedingCoeff=0.9955;MQ=88.30;MQ0=0;MQRankSum=-5.742;QD=39.71;ReadPosRankSum=3.975;VQSLOD=3.7301;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,28:28:81.19:1107,81,0	1/1:0,13:13:36.12:503,36,0	0/0:27,0:27:78.26:0,78,1225	0/0:20,0:20:46.44:0,46,662	1/1:1,27:28:81.26:1115,81,0	1/1:0,33:33:93.31:1301,93,0	1/1:0,19:19:54.18:755,54,0	1/1:0,36:36:99:1451,105,0	1/1:0,19:19:54.18:755,54,0	1/1:0,22:22:66.20:903,66,0	1/1:0,17:17:51.08:688,51,0	1/1:0,19:19:51.17:709,51,0	1/1:0,20:20:57.19:797,57,0	1/1:0,14:14:39.13:544,39,0	1/1:0,29:29:78.26:1091,78,0	1/1:0,22:22:66.22:923,66,0	0/0:19,0:19:57.15:0,57,862	0/0:22,0:22:63.15:0,63,956	1/1:0,20:20:60.17:804,60,0	1/1:0,25:25:75.21:1027,75,0	1/1:0,23:23:62.68:858,63,0	1/1:0,12:12:36.12:503,36,0	1/1:0,24:24:72.24:1006,72,0	1/1:0,18:18:51.17:713,51,0	1/1:0,16:16:45.15:629,45,0	1/1:0,25:25:75.25:1049,75,0	1/1:0,26:26:75.25:1049,75,0	1/1:0,8:8:15.05:210,15,0
chr10	28036183	.	TAAAA	T	16659.93	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-8.911;DP=603;FS=1.847;HRun=13;HaplotypeScore=118.3754;InbreedingCoeff=0.9953;MQ=82.09;MQ0=5;MQRankSum=-5.383;QD=32.54;ReadPosRankSum=4.691;VQSLOD=3.8756;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,12:18:23.99:344,24,0	1/1:1,12:12:30.09:438,30,0	0/0:32,0:25:35.98:0,36,683	0/0:26,0:25:31.86:0,32,582	1/1:0,22:24:66.13:909,66,0	1/1:1,21:22:57.18:833,57,0	1/1:3,16:19:39.09:570,39,0	1/1:14,22:36:65.95:937,66,0	1/1:4,17:21:42.08:614,42,0	1/1:2,16:19:48.11:696,48,0	1/1:2,12:14:33.07:482,33,0	1/1:1,9:10:24.05:351,24,0	1/1:1,19:19:42.11:614,42,0	1/1:2,23:25:66.20:965,66,0	1/1:4,16:20:33.08:483,33,0	1/1:3,17:20:36.08:507,36,0	0/0:6,0:20:45.06:0,45,554	0/0:3,0:9:24.08:0,24,311	1/1:6,16:22:48.07:659,48,0	1/1:4,27:31:78.20:1140,78,0	1/1:0,19:19:51.17:746,51,0	1/1:3,23:26:66.14:941,66,0	1/1:3,18:21:47.89:701,48,0	1/1:4,12:17:28.01:415,28,0	1/1:3,19:22:48.12:702,48,0	1/1:3,27:30:81.24:1164,81,0	1/1:4,30:34:81.25:1185,81,0	1/1:1,6:7:18.03:263,18,0
chr10	28036346	.	GT	G	4147.04	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=9.669;DP=526;FS=2.509;HRun=9;HaplotypeScore=158.7437;InbreedingCoeff=0.9529;MQ=57.32;MQ0=1;MQRankSum=-9.499;QD=9.32;ReadPosRankSum=2.678;VQSLOD=1.0121;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:13,1:14:18.45:113,18,0	1/1:13,0:13:27.18:91,27,0	0/0:21,0:18:37.10:0,37,329	0/0:12,0:11:11.26:0,11,141	1/1:21,0:21:38.60:277,39,0	1/1:22,0:22:42.05:193,42,0	1/1:20,0:20:29.08:115,29,0	1/1:28,0:28:63.30:316,63,0	1/1:12,0:13:23.23:130,23,0	1/1:17,0:17:34.44:146,34,0	1/1:20,0:20:46.45:257,46,0	1/1:14,0:14:21.34:72,21,0	1/1:19,0:20:35.42:120,35,0	1/1:12,0:12:27.60:92,28,0	1/1:14,0:14:25.78:87,26,0	1/1:17,0:17:28.31:96,28,0	0/0:32,0:32:75.13:0,75,808	0/0:16,0:16:39.10:0,39,439	1/1:13,6:19:47.63:283,48,0	1/1:27,0:27:54.69:254,55,0	1/1:8,0:8:9.96:51,10,0	1/1:15,0:15:35.71:189,36,0	1/1:34,0:34:62.34:296,62,0	1/1:17,0:17:23.56:79,24,0	1/1:24,0:24:49.79:237,50,0	1/1:30,0:30:74.34:386,74,0	1/1:23,0:23:44.69:204,45,0	1/1:3,0:3:8.37:63,8,0
chr10	28036351	.	TTTTTG	T	18620.40	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=8.336;DP=541;FS=2.352;HRun=0;HaplotypeScore=143.9652;InbreedingCoeff=0.9714;MQ=58.67;MQ0=1;MQRankSum=-9.421;QD=40.57;ReadPosRankSum=2.911;VQSLOD=4.5534;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,13:14:26.98:356,27,0	1/1:1,12:13:36.12:702,36,0	0/0:25,0:22:51.79:0,52,917	0/0:11,0:10:16.87:0,17,290	1/1:1,23:24:56.66:630,57,0	1/1:3,24:27:51.14:902,51,0	1/1:0,17:17:36.11:671,36,0	1/1:2,27:29:81.17:1323,81,0	1/1:1,13:14:27.07:434,27,0	1/1:2,15:17:45.08:773,45,0	1/1:0,22:22:57.08:883,57,0	1/1:0,13:13:27.09:528,27,0	1/1:2,16:18:45.15:878,45,0	1/1:1,12:13:34.93:647,35,0	1/1:0,17:17:33.11:643,33,0	1/1:0,18:18:39.09:723,39,0	0/0:31,0:31:78.22:0,78,2141	0/0:15,0:15:39.12:0,39,1071	1/1:9,12:21:60.15:954,60,0	1/1:2,24:26:66.19:1164,66,0	1/1:0,9:9:12.03:202,12,0	1/1:0,15:15:42.10:696,42,0	1/1:3,30:33:74.79:1307,75,0	1/1:0,18:18:30.10:585,30,0	1/1:1,22:23:60.16:1046,60,0	1/1:1,29:30:87.24:1498,87,0	1/1:3,22:25:54.15:963,54,0	1/1:0,3:3:9.01:114,9,0
chr10	28036353	.	TTTG	T	7123.33	PASS	AB=1.000;AC=47;AF=0.839;AN=56;BaseQRankSum=10.271;DP=536;FS=1.750;HRun=0;HaplotypeScore=164.6706;InbreedingCoeff=0.8139;MQ=59.12;MQ0=1;MQRankSum=-9.132;QD=15.66;ReadPosRankSum=7.750;VQSLOD=4.4153;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:14:6.52:124,7,0	1/1:12,1:13:35.96:302,36,0	0/0:26,0:24:45.01:0,45,691	0/0:11,0:10:16.57:0,17,178	1/1:23,0:23:9.09:201,9,0	1/1:25,2:27:30.25:336,30,0	1/1:17,0:17:29.06:271,29,0	1/1:28,0:28:50.23:507,50,0	1/1:14,0:14:8.85:137,9,0	1/1:16,0:16:34.23:315,34,0	1/1:22,0:22:17.75:290,18,0	1/1:13,0:13:26.97:227,27,0	1/1:18,0:18:44.95:377,45,0	1/1:13,0:13:35.93:297,36,0	1/1:17,0:17:32.96:277,33,0	1/1:18,0:18:38.93:323,39,0	0/0:28,0:28:78.16:0,78,1513	0/0:15,0:15:35.26:0,35,750	1/1:23,0:23:27.67:383,28,0	1/1:24,0:24:38.33:430,38,0	1/1:9,0:9:5.09:70,5,0	1/1:15,0:15:15.82:231,16,0	1/1:33,0:33:40.14:475,40,0	1/1:18,0:18:29.97:252,30,0	1/1:23,0:23:32.34:380,32,0	1/1:29,0:29:49.16:539,49,0	1/1:24,1:25:33.24:361,33,0	0/1:3,0:3:4.81:18,0,5
chr10	28037616	.	GA	G	6702.97	PASS	AB=0.561;AC=48;AF=0.889;AN=54;BaseQRankSum=-2.670;DP=429;FS=12.422;HRun=11;HaplotypeScore=129.9641;InbreedingCoeff=0.4999;MQ=69.32;MQ0=1;MQRankSum=-3.300;QD=17.23;ReadPosRankSum=4.807;VQSLOD=4.1357;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,8:11:20.97:172,21,0	1/1:1,4:5:11.98:98,12,0	0/0:21,0:18:33.04:0,33,290	0/0:15,0:12:3.20:0,3,55	1/1:2,24:26:53.35:412,53,0	0/1:4,12:17:10.70:236,0,11	1/1:2,7:10:17.02:129,17,0	1/1:4,15:19:25.90:320,26,0	1/1:0,10:10:26.97:222,27,0	1/1:2,15:18:43.98:351,44,0	1/1:5,31:36:39.88:534,40,0	1/1:4,15:19:50.80:406,51,0	1/1:1,12:13:32.91:264,33,0	1/1:5,7:12:20.96:172,21,0	1/1:2,11:13:26.97:221,27,0	1/1:2,11:15:37.03:283,37,0	1/1:3,13:17:15.26:232,15,0	./.	1/1:2,9:11:26.92:215,27,0	1/1:6,16:22:47.93:394,48,0	0/1:1,4:5:10.74:40,0,11	1/1:1,11:12:32.96:271,33,0	1/1:1,19:20:53.93:443,54,0	1/1:1,4:5:8.98:74,9,0	1/1:4,16:21:6.06:245,6,0	1/1:1,21:22:61.94:495,62,0	1/1:7,19:26:21.19:377,21,0	1/1:0,4:4:11.99:98,12,0
chr10	28037672	.	C	CT	5030.76	PASS	AB=1.000;AC=53;AF=0.946;AN=56;BaseQRankSum=-3.932;DP=362;FS=11.379;HRun=1;HaplotypeScore=182.6010;InbreedingCoeff=0.5555;MQ=67.35;MQ0=0;MQRankSum=-6.034;QD=14.29;ReadPosRankSum=3.108;VQSLOD=3.4964;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,11:12:25.64:131,26,0	1/1:0,4:4:6.95:39,7,0	0/1:11,0:11:8.18:8,0,244	0/0:10,0:10:26.43:0,26,231	1/1:3,14:17:40.77:213,41,0	1/1:1,16:17:45.90:241,46,0	1/1:1,11:12:31.54:167,32,0	1/1:8,19:27:80.26:562,80,0	1/1:2,9:11:31.04:167,31,0	1/1:2,17:19:33.36:347,33,0	1/1:6,20:26:67.22:395,67,0	1/1:2,12:14:29.86:173,30,0	1/1:1,12:13:36.49:186,36,0	1/1:1,12:13:27.43:157,27,0	1/1:1,9:10:28.52:147,29,0	1/1:3,13:16:45.55:250,46,0	1/1:1,5:6:14.25:72,14,0	1/1:0,2:2:5.88:36,6,0	1/1:2,5:7:17.75:118,18,0	1/1:2,25:27:69.50:347,69,0	1/1:0,5:5:9.94:66,10,0	1/1:1,12:13:31.04:171,31,0	1/1:2,13:15:36.43:179,36,0	1/1:0,3:3:8.48:47,8,0	1/1:0,10:10:20.47:122,20,0	1/1:2,16:18:50.07:314,50,0	1/1:4,16:20:49.37:306,49,0	1/1:0,4:4:11.61:70,12,0
chr10	28037673	.	TC	T	5892.20	PASS	AB=0.846;AC=53;AF=0.946;AN=56;BaseQRankSum=-3.883;DP=354;FS=9.630;HRun=1;HaplotypeScore=175.5345;InbreedingCoeff=0.5603;MQ=67.85;MQ0=0;MQRankSum=-6.056;QD=17.13;ReadPosRankSum=2.962;VQSLOD=4.2867;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,1:12:25.86:138,26,0	1/1:4,0:4:10.44:49,10,0	0/1:9,2:11:9.71:10,0,278	0/0:10,0:10:27.02:0,27,295	1/1:14,0:14:39.18:264,39,0	1/1:16,1:17:46.39:275,46,0	1/1:11,1:12:31.88:195,32,0	1/1:19,8:27:80.67:739,81,0	1/1:9,2:11:31.50:215,32,0	1/1:17,2:19:33.37:388,33,0	1/1:20,6:26:71.55:537,72,0	1/1:13,1:14:36.51:213,37,0	1/1:12,1:13:36.89:215,37,0	1/1:12,0:12:25.38:144,25,0	1/1:9,1:10:28.87:175,29,0	1/1:13,2:15:42.99:281,43,0	1/1:5,1:6:14.42:76,14,0	1/1:2,0:2:5.91:38,6,0	1/1:6,0:6:14.84:102,15,0	1/1:25,2:27:70.34:403,70,0	1/1:5,0:5:11.73:84,12,0	1/1:12,0:12:27.36:155,27,0	1/1:13,2:15:38.61:213,39,0	1/1:3,0:3:8.61:68,9,0	1/1:10,0:10:21.42:130,21,0	1/1:16,1:17:50.32:332,50,0	1/1:16,4:20:49.83:381,50,0	1/1:4,0:4:11.70:73,12,0
chr10	28037675	.	TC	T	3497.73	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-2.189;DP=353;FS=10.411;HRun=1;HaplotypeScore=183.6736;InbreedingCoeff=0.7819;MQ=67.93;MQ0=0;MQRankSum=-5.621;QD=10.54;ReadPosRankSum=2.725;VQSLOD=1.0259;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,11:12:24.18:102,24,0	1/1:0,4:4:9.85:37,10,0	0/0:11,0:11:15.89:0,16,214	0/0:10,0:10:8.51:0,9,151	1/1:0,14:14:31.90:115,32,0	1/1:1,16:17:42.83:181,43,0	1/1:1,11:12:28.62:118,29,0	1/1:8,19:27:61.39:343,61,0	1/1:2,9:11:27.10:107,27,0	1/1:2,17:19:22.13:246,22,0	1/1:6,20:26:57.23:229,57,0	1/1:2,12:14:32.66:131,33,0	1/1:1,12:13:33.32:134,33,0	1/1:0,12:12:23.26:105,23,0	1/1:1,9:10:25.88:103,26,0	1/1:2,13:15:39.04:162,39,0	1/1:1,5:6:13.51:57,14,0	1/1:0,2:2:5.74:30,6,0	1/1:0,5:5:14.53:83,15,0	1/1:2,25:27:63.42:247,63,0	1/1:0,5:5:7.95:32,8,0	1/1:0,12:12:26.94:135,27,0	1/1:2,13:15:36.06:164,36,0	1/1:0,3:3:7.36:26,7,0	1/1:0,10:10:19.77:95,20,0	1/1:1,16:17:48.98:261,49,0	1/1:4,16:20:44.24:197,44,0	1/1:0,4:4:11.19:58,11,0
chr10	28039330	.	G	GA	12639.46	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=3.732;DP=425;FS=12.196;HRun=6;HaplotypeScore=93.4008;InbreedingCoeff=0.9831;MQ=77.10;MQ0=0;MQRankSum=-2.558;QD=32.58;ReadPosRankSum=4.130;VQSLOD=3.7084;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,13:13:36.11:450,36,0	1/1:0,7:7:21.07:263,21,0	0/0:11,0:11:29.41:0,29,275	0/0:10,0:10:23.03:0,23,201	1/1:2,23:25:69.14:828,69,0	1/1:7,14:21:51.13:613,51,0	1/1:2,10:12:30.10:375,30,0	1/1:1,21:22:60.18:740,60,0	1/1:0,12:12:33.11:413,33,0	1/1:1,18:19:54.17:673,54,0	1/1:1,28:29:75.24:938,75,0	1/1:1,17:18:45.14:563,45,0	1/1:1,11:12:30.10:376,30,0	1/1:1,11:13:36.11:446,36,0	1/1:1,18:19:51.16:639,51,0	1/1:0,8:8:24.08:301,24,0	0/0:6,0:6:11.93:0,12,100	0/0:10,0:10:27.06:0,27,275	1/1:1,18:19:57.13:696,57,0	1/1:2,23:25:69.18:847,69,0	1/1:0,14:14:30.10:376,30,0	1/1:1,7:8:21.07:263,21,0	1/1:3,11:14:33.11:414,33,0	1/1:0,7:7:18.06:225,18,0	1/1:2,20:22:60.19:750,60,0	1/1:1,15:16:42.13:526,42,0	1/1:4,20:24:54.15:662,54,0	1/1:1,8:9:21.07:263,21,0
chr10	28040234	.	CAGAGAGAGAGAGAG	C	1549.29	PASS	AB=0.897;AC=26;AF=0.565;AN=46;BaseQRankSum=1.727;DP=481;FS=6.929;HRun=0;HaplotypeScore=151.6751;InbreedingCoeff=0.4178;MQ=65.35;MQ0=16;MQRankSum=-1.125;QD=6.05;ReadPosRankSum=0.868;VQSLOD=1.7215;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:28:15.04:201,15,0	0/0:7,0:7:2.92:0,3,17	./.	./.	./.	1/1:7,7:13:3.48:117,3,0	1/1:11,0:10:6:64,6,0	0/0:14,0:14:2.02:0,2,6	1/1:13,0:12:3.01:80,3,0	./.	0/0:13,5:18:0.47:0,0,1	1/1:9,8:17:3.01:116,3,0	0/1:15,0:15:16.84:33,0,17	1/1:5,4:9:6.02:233,6,0	1/1:18,0:17:9.02:107,9,0	1/1:16,9:22:9.03:261,9,0	0/0:13,0:13:21.54:0,22,377	0/0:12,0:11:15.01:0,15,325	1/1:18,0:18:11.37:110,11,0	1/1:23,0:23:5.62:64,6,0	0/0:15,0:14:0.89:0,1,2	./.	0/0:17,6:21:0.89:0,1,2	0/0:10,0:9:6.39:0,6,40	1/1:9,0:8:6:85,6,0	1/1:21,7:28:11.63:105,12,0	0/1:20,7:26:26.26:117,0,26	0/0:11,0:10:3.01:0,3,36
chr10	28040894	.	A	AT	16222.04	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=1.629;DP=469;FS=1.135;HRun=1;HaplotypeScore=66.6557;InbreedingCoeff=0.9952;MQ=81.64;MQ0=0;MQRankSum=-4.250;QD=39.76;ReadPosRankSum=3.683;VQSLOD=5.4996;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,12:12:36.12:539,36,0	1/1:0,8:8:24.08:360,24,0	0/0:16,0:16:45.15:0,45,584	0/0:13,0:13:36.12:0,36,467	1/1:0,23:24:66.22:982,66,0	1/1:2,25:27:63.21:944,63,0	1/1:0,14:14:39.13:584,39,0	1/1:3,29:32:93.27:1303,93,0	1/1:2,8:10:24.08:359,24,0	1/1:2,20:22:63.21:938,63,0	1/1:0,24:24:69.19:1009,69,0	1/1:0,8:9:24.08:353,24,0	1/1:0,13:13:33.11:494,33,0	1/1:1,8:9:21.07:315,21,0	1/1:0,22:22:63.21:944,63,0	1/1:0,11:11:27.09:404,27,0	0/0:18,0:18:51.12:0,51,627	0/0:14,0:14:33.04:0,33,394	1/1:0,8:8:24.08:360,24,0	1/1:1,26:27:78.07:1082,78,0	1/1:0,14:14:36.12:539,36,0	1/1:0,8:8:24.08:360,24,0	1/1:0,15:15:39.02:584,39,0	1/1:0,10:10:30.10:449,30,0	1/1:0,15:15:33.11:494,33,0	1/1:1,26:27:81.25:1167,81,0	1/1:0,31:32:78.13:1163,78,0	1/1:0,15:15:33.11:494,33,0
chr10	28041673	.	AGCAGGCTGAGC	A	32.40	PASS	AB=0.731;AC=2;AF=0.038;AN=52;BaseQRankSum=-1.996;DP=406;FS=39.460;HRun=0;HaplotypeScore=170.6228;InbreedingCoeff=-0.0553;MQ=41.68;MQ0=10;MQRankSum=3.079;QD=1.20;ReadPosRankSum=-3.879;VQSLOD=-0.6277;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:45.15:0,45,2028	0/0:3,0:3:6.02:0,6,305	0/0:23,0:9:27.09:0,27,1444	0/0:22,0:5:15.05:0,15,740	0/1:7,6:12:36.66:37,0,383	0/0:12,0:12:24.08:0,24,854	0/0:14,0:13:27.09:0,27,1197	0/0:18,0:15:36.12:0,36,1547	0/0:14,0:14:33.11:0,33,1449	0/0:15,0:14:12.13:0,12,1023	./.	0/0:15,0:15:39.13:0,39,1987	0/0:14,0:14:30.10:0,30,1271	0/0:16,0:16:39.13:0,39,1616	0/0:17,0:17:45.15:0,45,1990	0/0:14,0:14:33.11:0,33,1537	0/0:42,0:41:99:0,120,6217	0/0:21,0:21:60.20:0,60,3317	0/0:11,0:7:15.05:0,15,669	0/1:10,4:14:83.60:84,0,419	0/0:17,0:17:42.14:0,42,1535	0/0:2,4:6:3.01:0,3,149	0/0:8,0:8:14.72:0,15,580	0/0:17,0:17:41.81:0,42,1737	0/0:6,0:6:15.05:0,15,730	0/0:17,0:17:42.11:0,42,1869	0/0:13,0:12:27.09:0,27,1341	./.
chr10	28042567	.	G	GTGGA	598.76	PASS	AB=0.896;AC=5;AF=0.100;AN=50;BaseQRankSum=-5.573;DP=590;FS=1.166;HRun=0;HaplotypeScore=224.6821;InbreedingCoeff=0.2386;MQ=54.37;MQ0=22;MQRankSum=3.213;QD=6.96;ReadPosRankSum=-1.861;VQSLOD=2.4027;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:8.98:0,9,92	0/0:8,0:8:9:0,9,79	./.	./.	0/0:22,0:22:5.98:0,6,49	0/0:20,0:20:8.96:0,9,71	0/0:17,0:17:3:0,3,28	./.	0/0:18,0:18:17.97:0,18,155	0/0:23,0:23:15.02:0,15,140	0/1:25,0:25:15.75:16,0,54	0/0:19,0:19:27:0,27,244	0/0:27,0:27:24.01:0,24,217	0/0:17,0:17:9.01:0,9,83	0/0:17,0:17:3:0,3,28	0/0:25,0:24:39.04:0,39,362	1/1:12,14:26:24.08:561,24,0	0/1:6,5:11:11.92:131,0,12	0/0:23,0:21:6.01:0,6,56	0/0:18,0:18:18.02:0,18,166	0/1:24,0:21:0:0,0,0	0/0:11,0:11:3:0,3,28	0/0:14,0:14:8.97:0,9,76	0/0:17,0:17:3:0,3,28	0/0:19,0:19:12.01:0,12,112	0/0:21,0:20:21.02:0,21,215	0/0:32,0:32:27.03:0,27,251	0/0:6,0:6:3:0,3,28
chr10	28042570	.	GAT	G	511.73	PASS	AB=0.767;AC=13;AF=0.232;AN=56;BaseQRankSum=13.608;DP=629;FS=3.010;HRun=0;HaplotypeScore=222.6930;InbreedingCoeff=-0.3257;MQ=49.67;MQ0=24;MQRankSum=-11.248;QD=1.82;ReadPosRankSum=8.743;VQSLOD=1.8015;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,1:20:31.32:0,31,352	0/1:6,3:9:31.96:32,0,99	0/0:41,0:18:51.13:0,51,707	0/0:32,0:19:57.19:0,57,820	0/0:21,4:25:6.38:0,6,412	0/0:19,4:23:5.61:0,6,367	0/0:21,2:23:34.97:0,35,425	0/0:33,0:27:52.60:0,53,538	0/1:11,6:17:59.90:60,0,110	0/1:18,4:22:25.05:25,0,405	0/1:15,8:23:0.17:0,0,333	0/1:14,9:23:97.95:98,0,226	0/1:20,10:30:51.29:51,0,444	0/1:11,5:16:33.19:33,0,247	0/0:19,2:21:6.69:0,7,310	0/1:18,13:30:99:173,0,263	0/0:24,0:24:54.15:0,54,761	0/0:10,0:10:18.06:0,18,279	0/0:21,2:21:23.78:0,24,466	0/1:10,7:17:52.32:52,0,231	0/0:34,1:32:20.37:0,20,413	0/0:11,2:13:6.80:0,7,178	0/1:11,3:14:18.29:18,0,161	0/0:17,1:18:25.35:0,25,337	0/1:19,4:22:18.57:19,0,273	0/1:16,5:20:31.03:31,0,365	0/1:24,11:34:64.54:65,0,508	0/0:6,1:7:0.05:0,0,124
chr10	28042573	.	GGATGGATGGATGGA	G	10225	PASS	AB=0.829;AC=23;AF=0.411;AN=56;BaseQRankSum=18.689;DP=633;FS=6.813;HRun=0;HaplotypeScore=328.8938;InbreedingCoeff=-0.6974;MQ=45.82;MQ0=25;MQRankSum=-11.225;QD=20.57;ReadPosRankSum=5.116;VQSLOD=2.2932;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:19,1:20:74.53:75,0,315	0/1:5,3:8:84.01:292,0,84	0/0:38,0:15:45.13:0,45,656	0/0:31,0:17:51.17:0,51,763	0/1:21,4:25:99:283,0,319	0/1:19,4:23:99:429,0,266	0/1:21,2:23:99:156,0,321	0/0:33,0:27:59.66:0,60,556	0/1:11,6:17:93.45:626,0,93	0/1:18,4:22:99:475,0,288	0/1:14,8:22:99:584,0,266	0/1:14,9:23:99:915,0,155	0/1:21,10:31:99:930,0,351	0/1:11,5:16:99:407,0,203	0/1:18,2:20:99:149,0,266	0/1:19,13:31:99:1371,0,159	0/0:24,0:24:54.15:0,54,2100	0/0:10,0:10:21.07:0,21,687	0/1:21,2:21:99:262,0,261	0/1:13,7:20:99:614,0,227	0/1:36,1:34:65.95:66,0,409	0/1:11,2:13:99:141,0,145	0/1:11,3:14:99:294,0,142	0/1:18,1:19:99:100,0,268	0/1:21,4:24:99:432,0,257	0/1:17,5:21:99:519,0,257	0/1:24,11:34:99:1014,0,387	0/1:6,1:7:92.28:92,0,111
chr10	28042600	.	TGGATGGATGGATGGAC	T	12920.31	PASS	AB=0.990;AC=24;AF=0.429;AN=56;BaseQRankSum=16.389;DP=542;FS=20.181;HRun=0;HaplotypeScore=292.0915;InbreedingCoeff=-0.6265;MQ=48.79;MQ0=24;MQRankSum=-12.404;QD=30.33;ReadPosRankSum=16.267;VQSLOD=0.1266;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:15,0:15:93.29:182,0,93	0/1:9,0:9:61.47:336,0,61	0/0:27,0:12:29.18:0,29,355	0/0:31,0:14:40:0,40,479	0/1:22,0:22:99:400,0,161	0/1:23,0:23:99:532,0,198	0/1:14,0:14:99:267,0,104	0/0:23,0:18:2.01:0,2,264	0/1:11,4:15:65.87:752,0,66	0/1:15,0:15:99:592,0,120	0/1:19,0:19:99:745,0,112	0/1:22,0:22:38.68:1097,0,39	1/1:19,0:19:24.27:1178,24,0	0/1:17,0:17:99:539,0,146	0/1:22,0:22:99:263,0,171	0/1:30,0:30:84.67:1626,0,85	0/0:20,0:20:42.05:0,42,2076	0/0:15,0:15:34.96:0,35,857	0/1:21,0:21:99:283,0,260	0/1:18,0:18:99:753,0,99	0/1:34,0:31:99:185,0,173	0/1:14,0:14:99:193,0,138	0/1:13,0:13:49.43:361,0,49	0/1:13,0:13:88.80:148,0,89	0/1:18,0:17:52.85:530,0,53	0/1:19,0:18:64.59:615,0,65	0/1:30,0:29:99:1222,0,148	0/1:4,0:4:32:122,0,32
chr10	28043889	.	T	TAAAAA	10495.90	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=0.254;DP=568;FS=8.092;HRun=18;HaplotypeScore=174.5594;InbreedingCoeff=0.7514;MQ=68.33;MQ0=3;MQRankSum=-4.826;QD=21.91;ReadPosRankSum=-4.303;VQSLOD=0.3946;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:24:35.97:644,36,0	1/1:10,0:11:20.50:298,21,0	0/0:32,0:22:22.96:0,23,224	0/0:23,0:16:0.72:0,1,93	1/1:28,0:27:46.51:720,47,0	1/1:23,0:22:34.90:661,35,0	1/1:21,0:24:30.55:496,31,0	1/1:31,0:29:29.76:483,30,0	1/1:16,0:16:13.22:173,13,0	1/1:18,0:18:23.99:381,24,0	1/1:26,0:26:40.91:692,41,0	1/1:11,0:11:22.89:393,23,0	1/1:19,0:18:10.85:172,11,0	1/1:25,0:25:30.08:490,30,0	1/1:17,1:24:19.88:391,20,0	1/1:14,0:14:12:214,12,0	0/0:13,0:19:0.16:0,0,153	0/0:9,0:11:11.59:0,12,122	1/1:16,0:16:36.12:733,36,0	1/1:24,0:23:33.70:580,34,0	1/1:7,0:7:12.29:128,12,0	1/1:22,0:21:28.22:384,28,0	1/1:20,0:19:18.06:331,18,0	1/1:10,0:10:4.82:53,5,0	1/1:24,0:23:33.11:641,33,0	1/1:25,0:25:27.08:447,27,0	1/1:23,0:23:40.31:793,40,0	1/1:13,0:13:10.85:198,11,0
chr10	28045344	.	A	ATGTGTG	5556.61	PASS	AC=52;AF=1.000;AN=52;BaseQRankSum=-2.386;DP=581;FS=0.000;HRun=0;HaplotypeScore=144.9638;InbreedingCoeff=-0.0769;MQ=58.69;MQ0=7;MQRankSum=1.031;QD=10.50;ReadPosRankSum=1.719;VQSLOD=3.9365;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:25:12:198,12,0	1/1:6,0:7:3.01:78,3,0	./.	./.	1/1:15,4:23:5.69:190,6,0	1/1:27,4:32:14.36:420,14,0	1/1:17,4:23:15.66:370,16,0	1/1:34,0:32:6.42:58,6,0	1/1:13,2:19:7.15:226,7,0	1/1:14,0:13:14.64:300,15,0	1/1:14,0:14:3.01:65,3,0	1/1:15,0:15:7.99:91,8,0	1/1:19,4:24:6.28:168,6,0	1/1:13,5:19:9.03:230,9,0	1/1:14,2:22:11.72:308,12,0	1/1:16,5:23:12.45:261,12,0	1/1:15,1:16:3.01:96,3,0	1/1:13,0:13:5.64:163,6,0	1/1:15,3:21:20.99:411,21,0	1/1:14,0:13:11.69:212,12,0	1/1:23,0:23:6.02:91,6,0	1/1:19,0:19:12.01:179,12,0	1/1:12,0:12:3.01:46,3,0	1/1:21,0:21:18.03:290,18,0	1/1:15,0:20:6.02:77,6,0	1/1:30,4:36:31.60:603,32,0	1/1:22,2:24:17.18:383,17,0	1/1:7,0:7:3.01:38,3,0
chr10	28047278	.	G	GT	9884.55	PASS	AB=0.595;AC=45;AF=0.804;AN=56;BaseQRankSum=-7.696;DP=631;FS=8.276;HRun=11;HaplotypeScore=75.9404;InbreedingCoeff=0.6425;MQ=71.07;MQ0=1;MQRankSum=-1.484;QD=17.46;ReadPosRankSum=-0.089;VQSLOD=5.5123;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:7,19:26:13.41:241,0,13	1/1:4,10:14:30.06:305,30,0	0/0:12,0:12:19.92:0,20,142	0/0:13,0:14:27.85:0,28,181	1/1:8,15:23:24.53:371,25,0	1/1:7,17:24:17.66:347,18,0	1/1:1,22:23:58.67:583,59,0	1/1:9,18:29:39.55:537,40,0	1/1:6,11:17:3.82:220,4,0	1/1:13,20:32:36.78:524,37,0	1/1:5,22:27:11.08:427,11,0	1/1:6,26:32:57.11:579,57,0	1/1:4,12:18:33.47:362,33,0	1/1:11,9:21:20.07:325,20,0	1/1:3,24:27:60.12:609,60,0	1/1:3,14:19:44.79:425,45,0	0/0:19,0:20:43.82:0,44,328	0/0:17,0:17:39.17:0,39,344	0/1:9,19:28:10.56:422,0,11	1/1:7,18:25:27.67:411,28,0	1/1:5,12:17:9.42:261,9,0	1/1:4,17:22:44.89:430,45,0	1/1:3,16:19:17.69:183,18,0	1/1:7,24:30:63.13:639,63,0	1/1:4,21:26:39.95:543,40,0	1/1:6,19:26:49.43:502,49,0	1/1:3,23:28:19.98:536,20,0	0/1:4,5:11:5.53:102,0,6
chr10	28050527	.	AT	A	12178.19	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=3.178;DP=519;FS=8.492;HRun=7;HaplotypeScore=53.0820;InbreedingCoeff=0.9820;MQ=78.73;MQ0=0;MQRankSum=-2.082;QD=26.25;ReadPosRankSum=3.072;VQSLOD=5.3281;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,12:12:33.07:336,33,0	1/1:0,3:3:9.02:92,9,0	0/0:12,0:12:30.07:0,30,347	0/0:13,0:13:27.08:0,27,323	1/1:4,17:21:54.10:543,54,0	1/1:2,26:28:72.16:735,72,0	1/1:0,12:12:33.07:337,33,0	1/1:7,32:39:99:972,99,0	1/1:0,16:16:45.10:459,45,0	1/1:1,16:17:48.11:489,48,0	1/1:2,11:13:36.07:361,36,0	1/1:2,12:14:33.07:337,33,0	1/1:1,20:21:54.12:551,54,0	1/1:3,11:14:36.08:366,36,0	1/1:2,14:16:33.07:337,33,0	1/1:2,18:20:51.11:520,51,0	0/0:15,0:15:39.08:0,39,473	0/0:15,0:15:42.09:0,42,510	1/1:3,26:29:78.15:786,78,0	1/1:5,28:33:87.15:875,87,0	1/1:0,16:16:42.10:429,42,0	1/1:6,16:22:48.02:475,48,0	1/1:2,18:20:54.12:549,54,0	1/1:1,18:19:54.12:551,54,0	1/1:0,15:15:39.09:398,39,0	1/1:1,25:26:75.17:765,75,0	1/1:2,28:30:69.15:704,69,0	1/1:1,7:8:21.05:214,21,0
chr10	28050534	.	TG	T	1968.42	PASS	AB=0.978;AC=38;AF=0.679;AN=56;BaseQRankSum=9.612;DP=520;FS=2.746;HRun=2;HaplotypeScore=88.5133;InbreedingCoeff=0.1151;MQ=79.43;MQ0=0;MQRankSum=-3.982;QD=4.24;ReadPosRankSum=9.101;VQSLOD=0.1068;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:13,0:13:13.32:53,0,13	1/1:3,0:3:5.63:15,6,0	0/0:14,0:14:35.99:0,36,422	0/0:12,0:12:33.02:0,33,427	1/1:18,1:19:20.88:195,21,0	1/1:26,0:26:48.83:156,49,0	0/1:15,0:15:33.71:34,0,45	0/1:38,2:40:99:100,0,102	1/1:16,0:16:28.63:76,29,0	1/1:17,0:17:0.56:79,1,0	1/1:11,2:13:24.14:120,24,0	1/1:12,0:12:23.01:73,23,0	0/1:22,0:22:4.94:93,0,5	1/1:12,1:13:3.28:72,3,0	1/1:15,0:15:0.45:37,0,0	1/1:19,0:19:31.66:84,32,0	0/0:15,0:15:39.11:0,39,541	0/0:15,0:15:39.13:0,39,560	0/1:29,0:29:17.71:83,0,18	1/1:28,1:29:63.95:268,64,0	1/1:17,0:17:5.55:57,6,0	0/1:18,2:20:37.40:112,0,37	0/1:20,2:22:6.79:120,0,7	0/1:20,0:20:9.73:56,0,10	0/1:19,0:18:36.98:37,0,40	0/1:29,0:29:53.48:65,0,53	1/1:29,0:29:25.74:115,26,0	1/1:7,0:7:14.64:43,15,0
chr10	28051987	.	C	CA	1417.71	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-3.988;DP=654;FS=10.819;HRun=5;HaplotypeScore=65.7457;InbreedingCoeff=0.9459;MQ=69.38;MQ0=0;MQRankSum=-3.071;QD=30.16;ReadPosRankSum=0.388;VQSLOD=3.5393;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:56.79:0,57,639	0/0:6,0:6:18.02:0,18,182	0/0:20,0:19:13.21:0,13,382	0/0:19,0:18:7.57:0,8,301	0/0:43,0:43:99:0,120,1289	0/0:31,0:31:90.22:0,90,967	0/0:24,0:24:72.16:0,72,764	0/0:35,0:35:99:0,99,1057	0/0:13,0:13:36.06:0,36,377	0/0:32,0:32:87.19:0,87,920	0/0:28,0:28:78.19:0,78,837	0/0:22,0:22:63.14:0,63,668	0/0:26,0:26:72.18:0,72,773	0/0:22,0:22:60.07:0,60,645	0/0:28,0:28:81.20:0,81,868	0/0:18,0:18:45.09:0,45,472	1/1:1,26:27:66.21:868,66,0	1/1:3,17:19:51.17:671,51,0	0/0:19,0:19:51.12:0,51,548	0/0:39,0:39:99:0,108,1152	0/0:23,0:23:66.15:0,66,700	0/0:17,0:17:45.11:0,45,484	0/0:21,0:21:54.12:0,54,571	0/0:18,0:18:51.13:0,51,548	0/0:17,0:17:51.13:0,51,548	0/0:14,0:14:42.11:0,42,452	0/0:32,0:32:93.23:0,93,999	0/0:14,0:14:42.11:0,42,451
chr10	28057064	.	A	AT	18580.92	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-6.790;DP=633;FS=16.423;HRun=7;HaplotypeScore=56.0588;InbreedingCoeff=0.9847;MQ=77.60;MQ0=0;MQRankSum=-7.047;QD=30.76;ReadPosRankSum=4.327;VQSLOD=3.4134;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,29:35:90.27:1083,90,0	1/1:0,7:7:18.06:217,18,0	0/0:11,0:11:24.03:0,24,231	0/0:17,0:18:24.43:0,24,318	1/1:5,24:29:69.21:833,69,0	1/1:9,21:29:60.18:725,60,0	1/1:3,20:23:60.18:725,60,0	1/1:3,29:32:84.24:1002,84,0	1/1:1,18:19:54.17:652,54,0	1/1:1,17:18:51.12:589,51,0	1/1:3,15:18:42.12:500,42,0	1/1:1,17:18:51.16:616,51,0	1/1:3,21:24:66.20:795,66,0	1/1:3,23:26:69.21:834,69,0	1/1:5,34:39:93.28:1114,93,0	1/1:1,23:24:66.20:797,66,0	1/1:2,19:21:53.24:598,53,0	1/1:2,7:9:14.82:244,15,0	1/1:1,25:26:75.20:892,75,0	1/1:6,21:27:63.19:761,63,0	1/1:2,16:18:48.15:578,48,0	1/1:3,25:28:69.21:833,69,0	1/1:1,28:29:78.24:941,78,0	1/1:0,11:11:33.10:399,33,0	1/1:1,25:26:66.20:797,66,0	1/1:2,26:28:75.22:895,75,0	1/1:5,24:29:69.21:833,69,0	1/1:1,9:10:27.08:326,27,0
chr10	28057388	.	G	GAA	10506.16	PASS	AB=0.675;AC=25;AF=0.446;AN=56;BaseQRankSum=-3.843;DP=595;FS=2.079;HRun=3;HaplotypeScore=153.4599;InbreedingCoeff=-0.5267;MQ=42.76;MQ0=14;MQRankSum=-3.970;QD=19.67;ReadPosRankSum=9.300;VQSLOD=1.7947;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:9,7:14:46.84:150,0,47	0/0:4,0:4:12.01:0,12,120	0/0:13,0:6:8.18:0,8,131	0/0:7,0:4:8.98:0,9,84	0/1:16,19:34:99:760,0,223	0/1:4,17:21:31.98:665,0,32	0/1:10,9:16:25.36:167,0,25	0/1:36,4:37:99:481,0,467	0/1:5,8:11:77.70:253,0,78	0/1:10,16:23:68.77:719,0,69	0/1:16,8:23:99:411,0,207	0/1:9,8:16:9.14:422,0,9	0/1:12,17:28:99:557,0,180	0/1:9,18:27:99:562,0,103	0/1:7,15:21:56.38:567,0,56	0/1:8,17:24:99:671,0,168	0/0:20,0:18:27.31:0,27,436	0/0:17,0:17:23.06:0,23,467	0/1:11,5:15:99:245,0,136	0/1:6,10:17:99:309,0,122	0/1:10,0:10:54.16:54,0,95	0/1:14,16:28:18.76:748,0,19	1/1:4,11:14:35.80:481,36,0	1/1:5,4:9:18.96:194,19,0	0/1:19,12:29:99:381,0,274	0/1:16,19:34:99:760,0,264	0/1:18,29:45:99:849,0,176	0/1:3,5:8:23.23:101,0,23
chr10	28057398	.	G	GAA	5340.39	PASS	AB=1.000;AC=37;AF=0.685;AN=54;BaseQRankSum=4.449;DP=598;FS=5.942;HRun=1;HaplotypeScore=180.4827;InbreedingCoeff=-0.1623;MQ=39.56;MQ0=14;MQRankSum=-2.388;QD=9.27;ReadPosRankSum=-0.941;VQSLOD=1.0607;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:13:25.32:147,25,0	1/1:6,0:6:2.68:53,3,0	0/0:9,0:3:9:0,9,102	./.	0/1:37,0:36:99:185,0,336	0/1:21,0:21:22.61:210,0,23	0/1:18,0:15:12.50:102,0,12	0/1:42,0:39:99:177,0,503	1/1:14,0:12:19.46:117,19,0	0/1:30,0:26:21.80:284,0,22	0/1:23,0:23:39.93:246,0,40	0/1:17,0:16:8.34:152,0,8	1/1:29,0:28:53.42:439,53,0	1/1:26,0:26:55.85:368,56,0	0/1:20,0:19:0.05:200,0,0	1/1:26,0:25:40.90:242,41,0	0/1:19,0:17:99:154,0,244	0/1:19,0:19:54.59:55,0,362	0/1:17,0:15:99:105,0,124	1/1:19,0:19:29.17:222,29,0	0/0:11,0:11:4.32:0,4,105	1/1:31,0:29:16.37:302,16,0	1/1:12,4:15:8.79:121,9,0	1/1:8,1:9:10.15:107,10,0	0/1:34,0:32:50.70:322,0,51	1/1:33,0:32:11.10:404,11,0	0/1:45,0:43:94.16:469,0,94	1/1:10,0:10:22.73:156,23,0
chr10	28057972	.	GGGAA	G	8537.51	PASS	AB=0.900;AC=46;AF=0.885;AN=52;BaseQRankSum=-3.501;DP=617;FS=1.700;HRun=0;HaplotypeScore=125.8267;InbreedingCoeff=0.3874;MQ=51.23;MQ0=15;MQRankSum=1.961;QD=15.55;ReadPosRankSum=1.919;VQSLOD=4.6607;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:21,3:23:24:276,24,0	1/1:11,1:12:9.03:137,9,0	./.	./.	1/1:23,5:28:30.07:408,30,0	1/1:21,7:27:42.12:592,42,0	1/1:24,0:24:10.24:96,10,0	0/0:33,0:27:0:0,0,0	1/1:18,8:26:28.28:386,28,0	1/1:20,0:24:20.86:182,21,0	1/1:17,0:20:12:108,12,0	1/1:16,7:23:39.10:535,39,0	1/1:19,7:26:33.09:462,33,0	1/1:10,6:16:30.08:434,30,0	1/1:23,6:27:33.09:462,33,0	1/1:14,13:26:48.14:689,48,0	0/1:24,0:24:24.30:41,0,24	0/0:12,0:12:6.42:0,6,42	1/1:22,2:21:12.01:141,12,0	1/1:16,2:19:18.04:233,18,0	1/1:25,0:25:20.15:255,20,0	1/1:13,9:22:33.11:502,33,0	1/1:10,6:16:24.08:364,24,0	1/1:18,3:21:24.04:339,24,0	1/1:9,7:16:30.10:456,30,0	1/1:20,7:27:42.08:559,42,0	1/1:22,9:31:48.15:707,48,0	0/1:12,4:16:12.85:175,0,13
chr10	28058031	.	AT	A	16162.03	PASS	AB=0.941;AC=49;AF=0.875;AN=56;BaseQRankSum=-2.475;DP=622;FS=8.404;HRun=4;HaplotypeScore=107.0657;InbreedingCoeff=0.8366;MQ=70.49;MQ0=4;MQRankSum=-2.288;QD=28.45;ReadPosRankSum=4.034;VQSLOD=3.9958;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,24:26:63.19:755,63,0	1/1:1,9:10:27.08:324,27,0	0/0:16,0:12:36.06:0,36,438	0/0:23,0:18:45.04:0,45,532	1/1:0,27:27:72.22:863,72,0	1/1:3,17:20:48.15:575,48,0	1/1:1,20:21:54.16:648,54,0	1/1:4,29:31:87.27:1041,87,0	1/1:3,26:29:75.23:899,75,0	1/1:3,19:22:54.14:633,54,0	1/1:0,17:17:48.15:575,48,0	1/1:1,26:27:69.17:827,69,0	1/1:1,24:25:60.18:719,60,0	1/1:1,17:18:39.10:468,39,0	1/1:1,27:28:66.20:792,66,0	1/1:5,28:33:63.19:755,63,0	0/1:15,1:16:26.46:26,0,500	0/0:15,0:15:36.07:0,36,480	1/1:1,16:17:48.15:576,48,0	1/1:0,20:20:54.16:648,54,0	1/1:2,27:29:78.24:936,78,0	1/1:5,13:18:33.09:384,33,0	1/1:2,16:18:39.11:456,39,0	1/1:2,20:22:60.18:720,60,0	1/1:2,20:22:63.18:745,63,0	1/1:3,32:34:81.21:948,81,0	1/1:4,18:22:39.12:467,39,0	1/1:3,10:13:33.08:382,33,0
chr10	28060288	.	T	TACAC	4695.40	PASS	AB=0.743;AC=47;AF=0.904;AN=52;BaseQRankSum=-2.374;DP=559;FS=1.754;HRun=0;HaplotypeScore=131.6291;InbreedingCoeff=-0.1665;MQ=72.87;MQ0=13;MQRankSum=-0.389;QD=9.68;ReadPosRankSum=-0.921;VQSLOD=4.2974;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:27:78.35:100,0,78	0/1:6,5:13:16.29:200,0,16	./.	./.	1/1:8,0:14:5.75:83,6,0	1/1:6,5:18:8.65:212,9,0	1/1:11,6:19:15.01:303,15,0	1/1:27,0:27:17.98:221,18,0	0/1:7,5:18:10.20:257,0,10	1/1:15,4:20:18.05:339,18,0	1/1:12,0:12:2.48:24,2,0	1/1:7,0:13:4.08:15,4,0	1/1:11,5:16:11.93:283,12,0	1/1:9,5:18:5.75:83,6,0	0/1:11,7:19:8.10:378,0,8	1/1:12,5:19:17.55:311,18,0	0/1:14,2:28:10.18:200,0,10	1/1:6,0:6:3.01:43,3,0	1/1:9,0:12:14.44:170,14,0	1/1:9,7:17:8.77:153,9,0	1/1:11,1:20:11.51:152,12,0	1/1:13,2:14:5.99:141,6,0	1/1:16,5:23:6.02:141,6,0	1/1:18,4:24:5.37:83,5,0	1/1:12,6:26:8.56:153,9,0	1/1:22,6:28:22.77:354,23,0	1/1:11,5:22:14.74:226,15,0	1/1:1,1:3:3.01:71,3,0
chr10	28060942	.	TCA	T	19823.38	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-4.675;DP=613;FS=16.373;HRun=0;HaplotypeScore=83.5354;InbreedingCoeff=0.9950;MQ=91.30;MQ0=2;MQRankSum=-6.814;QD=37.62;ReadPosRankSum=7.126;VQSLOD=5.4076;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,32:33:90.30:1325,90,0	1/1:0,13:13:32.94:486,33,0	0/0:20,0:20:48.63:0,49,824	0/0:30,0:29:70.68:0,71,1118	1/1:1,31:32:84.28:1235,84,0	1/1:0,19:19:36.12:530,36,0	1/1:1,19:20:36.12:529,36,0	1/1:0,24:24:72.18:995,72,0	1/1:0,26:26:66.22:972,66,0	1/1:0,25:25:72.24:1059,72,0	1/1:1,26:28:72.24:1060,72,0	1/1:0,23:23:60.20:884,60,0	1/1:0,26:26:66.22:972,66,0	1/1:0,13:12:36.12:530,36,0	1/1:0,18:18:48.16:707,48,0	1/1:0,22:22:51.17:751,51,0	0/0:25,0:25:75.24:0,75,1359	0/0:11,0:11:33.06:0,33,552	1/1:1,28:28:81.23:1141,81,0	1/1:2,19:21:48.16:707,48,0	1/1:0,10:10:27.09:398,27,0	1/1:0,20:20:51.17:751,51,0	1/1:0,14:14:36.12:530,36,0	1/1:0,25:25:69.23:1016,69,0	1/1:0,24:24:63.21:928,63,0	1/1:1,29:30:84.26:1212,84,0	1/1:1,25:26:60.15:884,60,0	1/1:0,6:6:15.05:221,15,0
chr10	28061797	.	T	TGATAGATAGATA	13837.44	PASS	AC=50;AF=0.926;AN=54;BaseQRankSum=-0.459;DP=571;FS=2.057;HRun=0;HaplotypeScore=165.2916;InbreedingCoeff=0.3983;MQ=50.08;MQ0=8;MQRankSum=-0.729;QD=26.82;ReadPosRankSum=0.308;VQSLOD=3.7079;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:22:8.94:264,9,0	1/1:4,0:6:12.04:446,12,0	0/0:13,0:3:6.02:0,6,160	0/0:9,0:7:2.92:0,3,30	1/1:11,21:36:3.01:79,3,0	1/1:11,17:28:6.01:266,6,0	1/1:10,0:10:6.02:191,6,0	1/1:48,0:48:65.62:1247,66,0	1/1:16,0:16:6.02:175,6,0	1/1:28,0:27:51.16:1644,51,0	./.	1/1:9,7:20:6.02:332,6,0	1/1:20,0:19:27.05:793,27,0	1/1:12,0:12:18.06:689,18,0	1/1:14,2:17:24.06:796,24,0	1/1:5,7:11:6.02:175,6,0	1/1:9,0:9:6.02:107,6,0	1/1:6,0:6:6.01:76,6,0	1/1:10,4:15:21.06:725,21,0	1/1:13,21:39:12.96:423,13,0	1/1:2,2:7:3.01:88,3,0	1/1:16,0:16:21.04:471,21,0	1/1:4,15:21:6.02:120,6,0	1/1:16,0:16:6.02:188,6,0	1/1:34,0:33:33.08:961,33,0	1/1:9,27:42:75.10:2618,75,0	1/1:20,0:20:27.94:722,28,0	1/1:13,0:12:11.97:242,12,0
chr10	28061823	.	ATAATAGGTAGG	A	6580.38	PASS	AB=0.938;AC=26;AF=0.464;AN=56;BaseQRankSum=5.472;DP=543;FS=1.949;HRun=0;HaplotypeScore=164.6315;InbreedingCoeff=-0.5859;MQ=45.70;MQ0=10;MQRankSum=-9.150;QD=14.00;ReadPosRankSum=1.188;VQSLOD=3.7322;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:19,3:22:99:255,0,443	0/1:4,1:5:65.60:292,0,66	0/0:19,0:4:12.04:0,12,371	0/0:6,0:3:5.70:0,6,127	0/1:31,0:31:11.84:12,0,1446	0/1:17,0:17:36.23:36,0,138	0/1:12,1:13:99:104,0,522	0/1:58,0:55:99:508,0,2651	0/1:10,0:10:99:138,0,309	0/1:21,5:25:99:793,0,1276	0/0:34,0:34:36.12:0,36,1382	0/1:17,0:17:99:192,0,771	0/1:19,3:21:99:486,0,1137	0/1:8,3:11:99:420,0,435	0/1:18,2:20:99:414,0,889	0/0:14,0:12:23.87:0,24,599	1/1:7,0:7:9.03:161,9,0	1/1:4,1:5:12:227,12,0	0/1:13,0:13:99:248,0,916	0/1:31,0:31:99:193,0,1325	0/1:10,0:10:26.55:27,0,554	0/1:12,2:14:99:285,0,631	0/1:19,1:19:79.02:79,0,351	0/1:14,0:14:39.13:39,0,242	0/1:28,6:33:99:591,0,1556	0/1:35,0:35:99:669,0,1689	0/1:19,2:21:99:409,0,1323	0/1:14,0:14:3.13:3,0,643
chr10	28061825	.	A	AG	2310.18	PASS	AB=0.890;AC=23;AF=0.411;AN=56;BaseQRankSum=8.838;DP=530;FS=2.624;HRun=0;HaplotypeScore=114.3770;InbreedingCoeff=-0.4246;MQ=45.75;MQ0=9;MQRankSum=-7.864;QD=5.47;ReadPosRankSum=-0.514;VQSLOD=3.4190;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:17,4:21:99:157,0,158	0/1:4,2:6:33.83:94,0,34	0/0:18,0:4:12.04:0,12,168	0/0:6,0:3:5.69:0,6,71	0/1:31,0:31:0.40:0,0,498	0/0:16,0:16:2.47:0,2,76	0/1:9,3:12:27.92:28,0,158	0/1:47,8:52:99:234,0,1413	0/1:9,2:11:75.18:75,0,135	0/1:20,5:24:99:181,0,396	0/0:31,0:31:36.12:0,36,503	0/1:17,0:17:17.10:17,0,266	0/1:19,3:21:99:197,0,354	0/1:9,2:11:99:151,0,141	0/1:17,3:20:99:149,0,331	0/0:14,0:12:24.08:0,24,331	1/1:1,5:6:8.87:129,9,0	1/1:1,3:4:11.99:162,12,0	0/1:12,0:12:12.50:13,0,378	0/1:30,0:30:99:111,0,388	0/0:9,0:9:14.64:0,15,178	0/1:13,3:16:99:156,0,185	0/1:19,0:18:76.11:76,0,111	0/1:11,3:14:38.92:39,0,75	0/1:31,4:34:99:250,0,425	0/1:34,0:34:63.33:63,0,665	0/1:16,5:21:99:188,0,366	0/0:14,0:14:27.06:0,27,355
chr10	28061851	.	AG	A	92.29	PASS	AB=0.727;AC=3;AF=0.054;AN=56;BaseQRankSum=4.864;DP=553;FS=0.000;HRun=1;HaplotypeScore=115.4870;InbreedingCoeff=0.2937;MQ=49.94;MQ0=11;MQRankSum=-2.895;QD=8.39;ReadPosRankSum=0.764;VQSLOD=0.8587;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,1:29:40.89:0,41,583	0/0:5,0:5:11.54:0,12,154	0/0:9,0:2:6.02:0,6,96	0/0:9,0:5:15.05:0,15,238	0/0:28,0:28:60.19:0,60,912	0/0:15,0:14:24.08:0,24,383	0/0:17,0:16:26.90:0,27,431	0/0:48,0:44:99:0,129,2033	0/0:18,0:18:39.13:0,39,623	0/0:24,0:24:34.31:0,34,853	0/0:28,0:28:48.12:0,48,739	0/0:23,0:23:36.16:0,36,708	0/0:22,0:21:20.95:0,21,600	0/0:13,0:13:32.45:0,32,454	0/0:20,0:20:56.86:0,57,863	0/0:16,0:14:39.13:0,39,621	0/1:5,3:8:77.37:134,0,77	1/1:0,3:3:0.13:47,0,0	0/0:17,0:17:51.17:0,51,815	0/0:28,0:28:60.08:0,60,899	0/0:12,0:12:21.07:0,21,336	0/0:14,0:14:17.98:0,18,288	0/0:18,1:18:27.09:0,27,432	0/0:11,2:13:5.81:0,6,96	0/0:39,0:38:80.32:0,80,1146	0/0:39,0:38:96.28:0,96,1506	0/0:25,0:25:47.98:0,48,988	0/0:12,0:12:27.05:0,27,403
chr10	28061945	.	GGA	G	1386.70	PASS	AB=1.000;AC=45;AF=0.804;AN=56;BaseQRankSum=2.831;DP=487;FS=6.699;HRun=0;HaplotypeScore=132.5183;InbreedingCoeff=0.2149;MQ=69.02;MQ0=3;MQRankSum=-1.559;QD=3.17;ReadPosRankSum=2.221;VQSLOD=1.7787;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:14:11.47:60,11,0	1/1:11,0:11:11.02:51,11,0	0/0:24,0:14:3.48:0,3,42	0/1:25,0:13:0.05:0,0,0	1/1:16,0:16:2.94:18,3,0	0/1:18,0:17:11.91:35,0,12	0/1:13,0:13:2.02:26,0,2	0/1:34,0:31:15.99:28,0,16	1/1:18,0:18:11.36:56,11,0	1/1:25,0:24:22.95:122,23,0	1/1:9,0:9:2.80:13,3,0	1/1:14,0:14:16.13:81,16,0	1/1:22,0:22:31.08:156,31,0	0/1:19,0:19:7.75:8,0,19	1/1:23,0:23:4.66:19,5,0	1/1:17,0:17:16.86:119,17,0	1/1:8,7:15:13.65:244,14,0	1/1:1,2:3:6.02:69,6,0	1/1:18,0:17:1.70:41,2,0	1/1:16,0:16:5.87:35,6,0	1/1:19,0:19:14.23:78,14,0	0/0:5,0:5:2.68:0,3,11	1/1:13,0:13:2.80:13,3,0	1/1:13,0:13:14.52:83,15,0	0/0:21,0:21:1.82:0,2,6	1/1:31,0:31:7.67:86,8,0	1/1:21,0:21:7.72:34,8,0	1/1:10,0:10:8.39:41,8,0
chr10	28061949	.	A	AGG	7033.55	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-0.888;DP=408;FS=0.000;HRun=1;HaplotypeScore=104.4792;InbreedingCoeff=0.7871;MQ=69.02;MQ0=4;MQRankSum=-3.345;QD=20.51;ReadPosRankSum=-0.081;VQSLOD=2.3875;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,3:8:17.06:219,17,0	1/1:11,0:10:18.10:148,18,0	0/0:23,0:13:37.25:0,37,334	0/0:24,0:12:7.56:0,8,49	1/1:7,1:8:11.68:129,12,0	1/1:14,2:15:24.64:340,25,0	1/1:10,2:12:29.81:283,30,0	1/1:24,0:21:59.89:588,60,0	1/1:18,0:18:13.93:75,14,0	1/1:5,12:16:47.97:608,48,0	1/1:7,0:7:14.51:96,15,0	1/1:6,6:13:36.01:466,36,0	1/1:16,4:20:54.71:631,55,0	1/1:18,0:18:10.66:118,11,0	1/1:23,1:24:29.02:268,29,0	1/1:12,4:16:43.08:519,43,0	0/0:15,0:15:20.30:0,20,165	0/0:3,0:3:1.54:0,2,38	1/1:17,0:16:34.21:304,34,0	1/1:8,2:10:21.01:236,21,0	1/1:12,6:18:41.94:486,42,0	1/1:1,0:1:3:27,3,0	1/1:10,0:10:10.87:82,11,0	1/1:6,6:12:23.69:329,24,0	1/1:4,7:11:8.01:81,8,0	1/1:21,3:24:64.91:657,65,0	1/1:21,0:21:16.80:187,17,0	1/1:1,6:7:9.03:160,9,0
chr10	28061952	.	GAGA	G	1758.53	PASS	AB=0.886;AC=28;AF=0.500;AN=56;BaseQRankSum=8.610;DP=392;FS=5.174;HRun=0;HaplotypeScore=121.8326;InbreedingCoeff=-0.3641;MQ=69.39;MQ0=4;MQRankSum=-3.880;QD=5.38;ReadPosRankSum=9.418;VQSLOD=0.9815;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:7,1:8:2.26:94,0,2	0/1:9,2:10:13.30:35,0,13	0/0:23,0:13:36.10:0,36,476	0/0:24,0:12:15.46:0,15,158	0/1:4,1:5:23.20:26,0,23	0/1:10,4:13:64.38:70,0,64	0/1:8,4:12:35.54:60,0,36	0/1:17,7:21:70.13:70,0,150	0/1:19,0:19:1.38:33,0,1	0/1:13,4:16:56.48:224,0,56	0/1:4,2:6:3.67:4,0,12	0/1:13,0:13:28.59:160,0,29	0/1:17,3:20:49.96:227,0,50	0/1:17,2:19:0.98:1,0,32	0/1:22,1:23:15.16:15,0,55	0/1:11,4:15:9.66:201,0,10	0/0:13,0:13:5.74:0,6,67	0/0:5,0:5:5.52:0,6,25	0/1:16,0:15:46.42:50,0,46	0/1:6,0:6:20.11:57,0,20	0/1:17,1:18:47.57:140,0,48	1/1:1,0:1:2.37:8,2,0	0/1:9,0:9:2.61:3,0,10	1/1:11,1:12:14.88:174,15,0	1/1:7,2:9:3.27:14,3,0	0/1:20,2:22:89.35:119,0,89	0/1:19,2:21:31.43:38,0,31	1/1:6,1:7:9.01:90,9,0
chr10	28061960	.	GAGAGAGAGAGAGAGAC	G	9425.24	PASS	AB=1.000;AC=51;AF=0.911;AN=56;BaseQRankSum=-0.131;DP=356;FS=0.000;HRun=0;HaplotypeScore=142.6330;InbreedingCoeff=0.3451;MQ=51.14;MQ0=4;MQRankSum=0.818;QD=27.72;ReadPosRankSum=2.533;VQSLOD=3.9261;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:7,1:8:13.56:364,14,0	1/1:4,7:10:11.98:471,12,0	0/0:16,0:7:13.13:0,13,131	0/1:16,0:4:0.08:0,0,0	1/1:6,1:6:11.83:165,12,0	1/1:14,0:13:20.62:319,21,0	1/1:12,0:12:15.01:237,15,0	1/1:34,0:27:47.49:624,47,0	1/1:1,18:19:12.04:549,12,0	1/1:16,0:15:44.78:758,45,0	1/1:3,1:4:3.01:138,3,0	1/1:10,0:10:16.06:453,16,0	1/1:14,3:17:42.10:1031,42,0	1/1:4,10:14:5.51:147,6,0	1/1:5,14:19:6.02:201,6,0	1/1:11,2:13:33.10:823,33,0	0/1:14,0:14:99:116,0,204	0/1:6,0:6:1.97:2,0,226	1/1:4,12:14:35.91:615,36,0	1/1:3,0:3:8.99:161,9,0	1/1:13,0:13:24.05:434,24,0	1/1:2,0:2:3.01:44,3,0	1/1:2,8:10:2.42:137,2,0	1/1:11,0:11:14.73:350,15,0	1/1:9,0:9:5.95:117,6,0	1/1:15,1:16:39:718,39,0	1/1:3,17:20:7.89:255,8,0	1/1:6,0:6:9.03:196,9,0
chr10	28063467	.	A	AT	9478.33	PASS	AB=0.538;AC=47;AF=0.839;AN=56;BaseQRankSum=-6.348;DP=395;FS=14.947;HRun=8;HaplotypeScore=35.9786;InbreedingCoeff=0.7865;MQ=67.96;MQ0=0;MQRankSum=-1.907;QD=26.93;ReadPosRankSum=1.130;VQSLOD=3.7359;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,29:36:87.26:1004,87,0	1/1:1,8:9:24.07:277,24,0	0/0:5,0:5:3:0,3,27	0/0:8,0:7:12:0,12,109	1/1:0,15:15:36.11:415,36,0	1/1:4,12:16:42.04:455,42,0	1/1:3,8:11:24.06:269,24,0	1/1:6,23:28:72.10:777,72,0	1/1:3,8:10:21.06:242,21,0	1/1:3,12:15:36.11:415,36,0	0/1:1,6:7:9.41:155,0,9	1/1:3,4:7:12.04:138,12,0	1/1:1,9:10:27.08:312,27,0	1/1:0,12:12:30.09:346,30,0	1/1:2,13:15:42.08:470,42,0	1/1:3,13:16:36.11:415,36,0	0/0:11,0:11:30.02:0,30,274	0/0:19,0:19:47.86:0,48,425	1/1:5,11:16:36.11:415,36,0	1/1:1,14:15:42.08:470,42,0	1/1:4,19:23:51.15:589,51,0	1/1:4,10:14:27.08:312,27,0	1/1:1,10:11:27.04:297,27,0	1/1:3,13:16:39.12:450,39,0	1/1:0,9:9:24.07:277,24,0	1/1:2,12:13:36.07:402,36,0	1/1:5,15:21:23.52:506,24,0	1/1:1,3:4:6.02:69,6,0
chr10	28067744	.	G	GA	15419.71	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-3.514;DP=644;FS=5.421;HRun=8;HaplotypeScore=88.5301;InbreedingCoeff=0.9658;MQ=80.18;MQ0=0;MQRankSum=-5.679;QD=27.63;ReadPosRankSum=4.007;VQSLOD=5.1247;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,11:15:17.06:347,17,0	1/1:2,12:14:29.93:346,30,0	0/0:31,0:29:38.88:0,39,339	0/0:31,0:28:27.85:0,28,399	1/1:7,30:37:65.77:996,66,0	1/1:6,25:31:69.21:796,69,0	1/1:5,20:25:57.16:651,57,0	1/1:10,31:43:98.94:1088,99,0	1/1:0,11:12:29.92:326,30,0	1/1:8,28:37:90.10:1018,90,0	1/1:1,16:17:45.03:488,45,0	1/1:3,22:25:54.16:623,54,0	1/1:5,24:30:72:796,72,0	1/1:0,10:11:30.08:338,30,0	1/1:4,25:29:63.19:727,63,0	1/1:1,20:20:57.17:658,57,0	0/0:12,0:12:33.02:0,33,302	0/0:12,0:12:6.10:0,6,199	1/1:2,10:12:30.09:346,30,0	1/1:2,23:25:66.20:762,66,0	1/1:2,13:15:39.12:450,39,0	1/1:2,21:23:57.17:658,57,0	1/1:2,20:22:57.13:643,57,0	1/1:0,21:21:63.19:727,63,0	1/1:3,26:30:69.04:776,69,0	1/1:2,27:29:81.23:926,81,0	1/1:4,23:27:60.18:692,60,0	1/1:0,7:7:21.06:242,21,0
chr10	28068515	.	ATCTCTCTCTC	A	1659.37	PASS	AB=0.739;AC=27;AF=0.794;AN=34;BaseQRankSum=1.213;DP=424;FS=14.594;HRun=0;HaplotypeScore=128.3744;InbreedingCoeff=0.3370;MQ=67.09;MQ0=15;MQRankSum=0.289;QD=7.94;ReadPosRankSum=-0.202;VQSLOD=1.4638;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:17:6.02:117,6,0	1/1:4,0:4:6.02:177,6,0	./.	./.	./.	1/1:8,0:9:6.02:132,6,0	./.	0/0:22,0:22:0.89:0,1,2	./.	1/1:14,0:13:3.01:46,3,0	./.	1/1:13,1:16:12.04:265,12,0	1/1:8,3:11:3.01:85,3,0	0/1:11,3:17:40.89:48,0,41	./.	1/1:12,7:20:3.01:88,3,0	0/0:21,0:19:12.93:0,13,472	0/0:6,0:6:6.02:0,6,140	1/1:15,4:19:9:205,9,0	./.	1/1:25,0:18:8.99:168,9,0	1/1:8,4:12:0.47:1,0,0	./.	1/1:16,0:16:2.99:23,3,0	./.	1/1:13,4:16:10.24:330,10,0	1/1:7,3:10:3.01:85,3,0	./.
chr10	28068738	.	GTT	G	468.42	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=4.122;DP=491;FS=7.240;HRun=15;HaplotypeScore=66.2060;InbreedingCoeff=0.7958;MQ=71.36;MQ0=1;MQRankSum=0.659;QD=9.18;ReadPosRankSum=4.845;VQSLOD=1.3516;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:19:39.37:0,39,387	0/0:5,0:7:20.73:0,21,206	0/0:20,0:11:2.96:0,3,19	0/1:15,0:9:1.95:8,0,2	0/0:20,0:24:49.07:0,49,497	0/0:21,0:19:39.06:0,39,441	0/0:15,0:17:30.53:0,31,352	0/0:23,2:26:20.32:0,20,412	0/0:11,0:12:29.52:0,30,276	0/0:24,0:26:43.48:0,43,484	0/0:18,0:24:57.03:0,57,535	0/0:14,0:17:37.98:0,38,331	0/0:10,0:12:26.35:0,26,225	0/0:13,0:14:29.99:0,30,332	0/0:11,0:15:38.43:0,38,380	0/0:22,0:24:54.38:0,54,588	1/1:7,15:24:32.59:378,33,0	1/1:3,6:11:26.45:208,26,0	0/0:19,0:20:34.40:0,34,361	0/0:15,1:17:17.44:0,17,401	0/0:7,0:7:11.71:0,12,153	0/0:17,0:17:32.60:0,33,337	0/0:19,1:21:24.09:0,24,452	0/0:5,0:6:17.49:0,17,191	0/0:25,0:27:68.03:0,68,754	0/0:17,1:20:14.59:0,15,302	0/0:14,0:15:31.85:0,32,273	0/0:11,0:12:26.98:0,27,267
chr10	28070709	.	G	GTAGA	23477.91	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-5.039;DP=579;FS=1.163;HRun=0;HaplotypeScore=64.8718;InbreedingCoeff=0.9100;MQ=61.52;MQ0=3;MQRankSum=-3.474;QD=42.53;ReadPosRankSum=3.262;VQSLOD=4.9383;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,16:19:30.10:731,30,0	1/1:2,7:9:15.05:368,15,0	0/0:13,0:12:11.22:0,11,235	0/0:12,0:10:17.64:0,18,307	1/1:5,32:38:63.22:1475,63,0	1/1:3,18:23:24.08:604,24,0	1/1:4,9:14:18.06:453,18,0	1/1:14,23:38:75.14:1472,75,0	1/1:0,16:16:33.11:830,33,0	1/1:3,30:34:90.27:2076,90,0	1/1:4,23:27:51.18:1264,51,0	1/1:4,15:19:39.13:979,39,0	1/1:4,25:30:57.20:1403,57,0	1/1:4,18:23:36.12:902,36,0	1/1:4,13:18:24.08:601,24,0	1/1:1,21:22:36.12:906,36,0	1/1:1,9:11:21.07:528,21,0	1/1:4,6:11:9.03:226,9,0	1/1:5,16:22:54.05:1044,54,0	1/1:4,27:31:51.18:1273,51,0	1/1:0,9:9:18.06:453,18,0	1/1:1,14:15:24.08:604,24,0	1/1:4,17:22:39.13:977,39,0	1/1:1,10:12:24.08:604,24,0	1/1:3,14:18:24.08:600,24,0	1/1:2,17:21:51.12:1161,51,0	1/1:6,34:40:66.23:1646,66,0	1/1:0,6:9:12.04:297,12,0
chr10	28071568	.	C	CT	758.38	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=4.450;DP=509;FS=22.971;HRun=8;HaplotypeScore=58.4772;InbreedingCoeff=0.9898;MQ=78.91;MQ0=0;MQRankSum=0.023;QD=22.31;ReadPosRankSum=0.952;VQSLOD=2.1593;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:69.03:0,69,631	0/0:11,0:11:27.01:0,27,247	0/0:15,0:14:25.43:0,25,201	0/0:12,0:12:22.04:0,22,211	0/0:29,0:31:65.03:0,65,573	0/0:20,0:20:54.02:0,54,493	0/0:6,0:6:18.01:0,18,165	0/0:21,0:21:54.01:0,54,490	0/0:13,0:13:33.01:0,33,302	0/0:13,0:13:39.02:0,39,356	0/0:25,0:25:68.99:0,69,617	0/0:21,0:21:56.96:0,57,508	0/0:17,0:17:48.02:0,48,439	0/0:20,0:20:48:0,48,434	0/0:24,0:24:66.01:0,66,596	0/0:21,0:21:54:0,54,485	1/1:2,16:19:44.97:499,45,0	1/1:3,12:15:33.10:381,33,0	0/0:21,0:21:56.98:0,57,505	0/0:25,0:25:69.03:0,69,631	0/0:9,0:9:27.01:0,27,247	0/0:16,0:16:39.01:0,39,357	0/0:14,0:14:36.02:0,36,329	0/0:22,0:22:63.02:0,63,573	0/0:22,0:22:60.03:0,60,549	0/0:17,0:17:45.02:0,45,412	0/0:28,0:28:75.02:0,75,682	0/0:7,0:7:21.01:0,21,192
chr10	28071887	.	CACACACACACACACACACACAA	C	477.59	PASS	AB=0.957;AC=15;AF=0.278;AN=54;BaseQRankSum=-6.467;DP=711;FS=2.488;HRun=0;HaplotypeScore=318.7568;InbreedingCoeff=-0.0095;MQ=53.33;MQ0=24;MQRankSum=-4.239;QD=1.43;ReadPosRankSum=-6.330;VQSLOD=0.9771;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:36,0:35:6.60:7,0,236	0/1:12,0:12:2.90:3,0,645	1/1:19,0:10:0.47:1,0,0	./.	0/1:36,0:35:69.75:70,0,323	0/0:31,0:30:3.71:0,4,632	0/0:27,0:25:25.79:0,26,794	0/1:34,0:33:17.71:18,0,590	0/1:33,0:33:21.64:22,0,316	0/0:32,0:30:40.16:0,40,2333	0/0:26,0:26:37.65:0,38,1313	0/1:16,0:16:24.28:24,0,138	0/0:25,0:24:15.52:0,16,715	0/0:28,0:25:3.58:0,4,256	1/1:22,0:22:9.59:52,10,0	0/0:24,0:24:15.43:0,15,516	0/1:14,25:38:35.48:341,0,35	1/1:17,0:16:2.96:23,3,0	0/0:16,0:16:24:0,24,430	0/0:21,0:20:24.23:0,24,294	0/1:42,0:40:11.68:12,0,692	0/1:27,0:27:49.28:49,0,260	0/0:16,0:14:2.03:0,2,609	0/0:36,0:36:32.90:0,33,1406	0/0:18,0:18:8.17:0,8,480	0/0:22,0:22:57.17:0,57,1753	0/0:25,0:25:10.07:0,10,1076	0/0:8,0:6:3.01:0,3,140
chr10	28071901	.	CACACACAA	C	4282.30	PASS	AB=0.984;AC=43;AF=0.768;AN=56;BaseQRankSum=3.210;DP=706;FS=3.487;HRun=0;HaplotypeScore=187.1845;InbreedingCoeff=-0.0770;MQ=52.52;MQ0=25;MQRankSum=3.696;QD=6.39;ReadPosRankSum=3.131;VQSLOD=3.6260;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:38,0:37:31.61:74,0,32	1/1:9,0:9:6.07:139,6,0	0/0:14,0:3:5.79:0,6,38	0/0:22,0:5:2.88:0,3,15	1/1:36,0:35:22.87:164,23,0	0/1:32,0:30:10.86:70,0,11	1/1:30,0:28:13.05:176,13,0	0/1:37,0:34:38.92:330,0,39	1/1:32,0:32:5.54:67,6,0	0/1:29,0:27:61.84:281,0,62	1/1:24,1:25:15.42:258,15,0	1/1:14,0:14:8.68:61,9,0	1/1:24,0:23:14.68:114,15,0	1/1:30,0:27:2.78:31,3,0	0/1:26,0:26:18.41:36,0,18	1/1:23,0:23:13.12:112,13,0	1/1:33,0:32:7.27:120,7,0	1/1:17,0:16:4.50:27,5,0	0/1:18,0:17:62.18:106,0,62	1/1:20,0:19:32.57:302,33,0	1/1:46,0:44:27.07:354,27,0	1/1:23,1:24:19.51:150,20,0	0/1:16,1:15:5.37:207,0,5	1/1:34,0:34:5.83:280,6,0	0/1:17,1:18:20.29:25,0,20	0/1:27,1:28:30.59:431,0,31	1/1:21,0:21:3.64:336,4,0	1/1:9,0:7:3.01:32,3,0
chr10	28071903	.	CACACAA	C	5207.60	PASS	AB=0.698;AC=42;AF=0.750;AN=56;BaseQRankSum=2.352;DP=692;FS=1.233;HRun=0;HaplotypeScore=168.4883;InbreedingCoeff=-0.1295;MQ=52.68;MQ0=25;MQRankSum=4.021;QD=7.88;ReadPosRankSum=3.639;VQSLOD=3.7905;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:13,25:36:22.53:23,0,42	1/1:8,0:8:20.55:175,21,0	0/0:12,0:2:5.79:0,6,38	0/0:19,0:3:2.88:0,3,15	1/1:7,27:33:3.65:181,4,0	0/1:5,27:31:15.58:165,0,16	1/1:31,0:29:18.62:240,19,0	0/1:37,0:34:28.23:366,0,28	0/1:6,26:32:16.40:89,0,16	0/1:11,19:28:50.78:554,0,51	1/1:23,0:23:11.71:244,12,0	1/1:3,10:13:8.69:102,9,0	1/1:1,23:23:14.63:297,15,0	1/1:5,25:27:2.95:104,3,0	0/1:6,19:25:18.70:37,0,19	1/1:3,20:23:0.91:134,1,0	1/1:34,0:33:7.27:92,7,0	1/1:16,0:15:2.52:23,3,0	0/1:17,0:16:32.62:103,0,33	1/1:20,0:19:35.56:280,36,0	1/1:43,0:41:37.02:350,37,0	1/1:4,20:24:19.21:155,19,0	0/1:6,10:15:8.85:208,0,9	1/1:32,2:34:12.35:306,12,0	1/1:5,13:18:5.12:85,5,0	0/1:7,21:28:17.06:539,0,17	0/1:20,2:22:9.76:290,0,10	1/1:2,7:7:3.01:69,3,0
chr10	28071905	.	CACAA	C	4151.75	PASS	AB=0.995;AC=40;AF=0.714;AN=56;BaseQRankSum=2.391;DP=689;FS=1.159;HRun=0;HaplotypeScore=159.7355;InbreedingCoeff=-0.3047;MQ=52.68;MQ0=24;MQRankSum=4.430;QD=6.14;ReadPosRankSum=2.425;VQSLOD=2.8932;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:39,0:37:13.28:13,0,64	1/1:7,1:8:10.32:99,10,0	0/0:13,0:2:5.79:0,6,38	0/1:21,0:5:6.96:20,0,7	0/1:33,0:32:21.37:146,0,21	0/1:31,1:30:23.38:111,0,23	1/1:32,0:30:16.05:163,16,0	0/1:38,0:35:28.85:380,0,29	0/1:31,0:31:36.22:57,0,36	0/1:30,0:28:54.89:374,0,55	0/1:23,0:23:37.61:188,0,38	1/1:12,0:12:8.84:70,9,0	1/1:24,0:23:14.63:140,15,0	1/1:30,0:27:3.10:44,3,0	0/1:22,1:23:18.49:37,0,18	0/1:23,0:23:17.63:81,0,18	1/1:32,0:32:7.26:64,7,0	1/1:16,0:15:2.73:23,3,0	0/1:19,0:18:25.21:161,0,25	1/1:18,0:17:34.55:253,35,0	1/1:43,0:41:47.16:418,47,0	1/1:24,0:24:19.27:125,19,0	0/1:15,0:14:26.36:115,0,26	1/1:34,0:34:4.89:371,5,0	1/1:17,1:18:8.43:113,8,0	0/1:26,0:26:27.49:397,0,27	0/1:22,0:22:7.47:152,0,7	1/1:9,0:7:3.01:37,3,0
chr10	28071907	.	CAA	C	3646.84	PASS	AB=0.970;AC=40;AF=0.714;AN=56;BaseQRankSum=1.067;DP=684;FS=0.000;HRun=3;HaplotypeScore=149.2784;InbreedingCoeff=-0.3098;MQ=53.06;MQ0=24;MQRankSum=4.912;QD=5.43;ReadPosRankSum=2.118;VQSLOD=0.0961;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:39,0:37:12.62:13,0,65	0/1:8,0:8:14.28:83,0,14	0/0:13,0:4:11.79:0,12,90	0/1:21,0:6:4.93:24,0,5	0/1:32,0:31:15.72:147,0,16	1/1:32,0:31:2.49:79,2,0	1/1:31,0:29:2.83:100,3,0	0/1:11,27:35:25.52:398,0,26	0/1:31,0:31:43.20:43,0,47	0/1:30,0:28:75.01:316,0,75	0/1:24,0:24:62.41:209,0,62	1/1:12,0:12:8.68:56,9,0	1/1:24,0:23:12.54:85,13,0	1/1:30,0:27:1.64:13,2,0	0/1:23,0:23:19.26:36,0,19	0/1:23,0:23:15.39:60,0,15	1/1:30,0:30:7.07:36,7,0	1/1:3,13:15:2.73:23,3,0	0/1:21,0:20:28.07:161,0,28	1/1:19,0:18:36.70:262,37,0	1/1:40,0:38:45.49:410,45,0	1/1:22,0:22:19.42:123,19,0	0/1:15,0:14:48.48:72,0,48	1/1:34,0:34:8.24:391,8,0	1/1:18,0:18:8.12:69,8,0	0/1:26,0:26:42.27:328,0,42	0/1:22,0:22:23.98:86,0,24	1/1:9,0:7:2.99:23,3,0
chr10	28071909	.	A	AAC	3704.14	PASS	AB=0.953;AC=29;AF=0.518;AN=56;BaseQRankSum=-0.572;DP=688;FS=3.871;HRun=0;HaplotypeScore=156.7397;InbreedingCoeff=-0.0681;MQ=53.31;MQ0=22;MQRankSum=-2.278;QD=6.98;ReadPosRankSum=-1.450;VQSLOD=3.2631;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:38,1:37:26.81:27,0,64	0/1:7,1:8:14.16:96,0,14	0/0:14,0:5:9.01:0,9,93	0/0:19,0:7:11.61:0,12,102	0/1:31,1:31:5.08:286,0,5	1/1:34,0:32:13.37:136,13,0	1/1:12,20:31:11.71:174,12,0	0/1:38,0:35:14.03:616,0,14	0/1:31,0:31:22.43:72,0,22	0/1:30,1:29:46.12:272,0,46	0/1:24,0:24:53.83:302,0,54	1/1:12,0:12:7.99:60,8,0	1/1:25,0:24:11.12:79,11,0	1/1:31,0:28:5.35:89,5,0	0/1:24,0:24:24.02:95,0,24	0/1:22,1:23:22.89:84,0,23	0/0:29,0:29:5.68:0,6,27	0/0:15,0:14:2.97:0,3,20	0/0:8,0:20:9.71:0,10,25	0/0:19,0:18:21.02:0,21,70	0/0:40,0:38:1.78:0,2,17	1/1:22,0:22:15.93:183,16,0	0/1:15,0:14:43.08:43,0,55	0/1:32,0:32:7.93:481,0,8	1/1:19,0:19:3.49:16,3,0	0/1:27,0:27:13.14:420,0,13	0/1:9,13:22:40.59:161,0,41	1/1:9,0:7:2.80:13,3,0
chr10	28072314	.	G	GATAC	3779.55	PASS	AB=0.939;AC=31;AF=0.574;AN=54;BaseQRankSum=-4.469;DP=520;FS=5.294;HRun=0;HaplotypeScore=179.8690;InbreedingCoeff=0.0152;MQ=36.71;MQ0=16;MQRankSum=0.718;QD=9.17;ReadPosRankSum=-0.270;VQSLOD=2.7981;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:13,3:15:2.65:18,0,3	0/0:14,1:12:14.87:0,15,144	./.	0/0:2,0:1:0:0,0,0	0/0:25,0:20:3.46:0,3,44	1/1:20,2:21:2.38:49,2,0	0/0:20,0:17:0.47:0,0,1	0/1:33,0:24:33.25:195,0,33	0/1:20,3:22:20.94:201,0,21	0/1:34,2:31:56.27:664,0,56	0/1:16,1:15:8.09:59,0,8	1/1:15,3:17:5.81:99,6,0	1/1:18,3:20:30.10:451,30,0	0/0:27,1:28:23.44:0,23,284	1/1:29,1:28:26.15:345,26,0	0/1:31,3:31:54.69:264,0,55	0/0:16,0:13:12.44:0,12,104	0/1:14,0:14:39.98:40,0,104	1/1:11,0:11:2.20:190,2,0	0/1:13,0:12:15.72:43,0,16	1/1:7,0:7:6.01:75,6,0	0/1:20,3:20:31.66:135,0,32	0/1:14,0:13:16.71:43,0,17	1/1:13,0:12:6:72,6,0	0/1:27,3:25:1.99:179,0,2	1/1:0,0:10:20.96:225,21,0	1/1:21,2:21:18.89:349,19,0	1/1:2,2:4:6.02:84,6,0
chr10	28072386	.	G	GATAC	5917.80	PASS	AB=0.704;AC=34;AF=0.773;AN=44;BaseQRankSum=0.309;DP=426;FS=2.632;HRun=0;HaplotypeScore=168.9213;InbreedingCoeff=0.3520;MQ=48.18;MQ0=4;MQRankSum=-2.496;QD=18.26;ReadPosRankSum=1.093;VQSLOD=4.5923;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,6:7:3.01:78,3,0	1/1:6,6:12:9.02:139,9,0	0/0:19,0:11:25.31:0,25,362	0/0:3,0:1:3.01:0,3,54	./.	./.	0/1:2,9:9:0:1,0,0	1/1:7,29:42:99:1678,108,0	1/1:2,8:10:9:123,9,0	1/1:6,18:24:51.14:1100,51,0	./.	1/1:1,13:14:3.01:77,3,0	1/1:0,23:25:3.01:77,3,0	1/1:1,20:23:5.38:77,5,0	0/1:2,12:14:0:0,0,0	1/1:2,20:22:6.02:154,6,0	0/1:12,0:12:31.99:48,0,32	0/1:9,0:9:9.85:82,0,10	1/1:3,11:15:39.08:765,39,0	1/1:2,12:14:14.97:236,15,0	./.	./.	0/1:1,13:15:0.02:0,0,0	0/1:3,5:8:0:0,0,0	./.	1/1:0,13:14:39.03:788,39,0	1/1:1,25:27:20.56:405,21,0	1/1:1,2:3:6.02:90,6,0
chr10	28072446	.	G	GT	535.71	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=1.512;DP=527;FS=10.309;HRun=7;HaplotypeScore=136.6337;InbreedingCoeff=0.9183;MQ=63.30;MQ0=0;MQRankSum=-1.581;QD=26.79;ReadPosRankSum=0.658;VQSLOD=1.9823;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:21.03:0,21,203	0/0:11,0:11:24.03:0,24,232	0/0:6,0:6:12.01:0,12,113	0/0:6,0:6:13.83:0,14,119	0/0:30,0:30:63.10:0,63,608	0/0:19,0:19:42.07:0,42,405	0/0:7,0:7:18.03:0,18,174	0/0:42,0:42:99:0,108,1026	0/0:20,0:20:51.08:0,51,492	0/0:22,0:22:51.08:0,51,492	0/0:26,0:26:57.09:0,57,550	0/0:13,0:13:24.03:0,24,232	0/0:31,0:31:57.09:0,57,550	0/0:23,0:23:48.07:0,48,463	0/0:23,0:23:36.05:0,36,348	0/0:32,0:32:57.07:0,57,550	1/1:0,15:15:42.13:507,42,0	1/1:1,4:5:12.04:145,12,0	0/0:16,0:16:42.05:0,42,401	0/0:23,0:23:60.08:0,60,574	0/0:5,0:5:12.02:0,12,116	0/0:26,0:26:63.08:0,63,601	0/0:15,0:15:26.92:0,27,260	0/0:7,0:7:21.03:0,21,203	0/0:28,0:28:60.10:0,60,579	0/0:26,0:26:69.11:0,69,666	0/0:37,0:37:63.09:0,63,608	0/0:4,0:4:12.02:0,12,116
chr10	28072704	.	C	CAGACTGAGGACCTACA	70823.15	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-9.171;DP=668;FS=13.184;HRun=0;HaplotypeScore=142.9229;InbreedingCoeff=0.7335;MQ=72.69;MQ0=0;MQRankSum=-9.987;QD=112.42;ReadPosRankSum=5.489;VQSLOD=3.9607;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,4:15:12.04:914,12,0	1/1:0,4:9:12.04:967,12,0	0/0:25,0:25:74.92:0,75,2585	0/0:13,0:13:36.12:0,36,1321	1/1:0,17:35:39.23:3032,39,0	1/1:0,16:44:51.18:4098,51,0	1/1:0,2:16:6.02:484,6,0	1/1:0,1:44:99:7152,132,0	1/1:0,7:30:24.08:1933,24,0	1/1:1,13:26:75.25:4944,75,0	1/1:0,12:29:33.11:2563,33,0	1/1:0,11:21:33.11:2660,33,0	1/1:0,13:34:42.62:3376,43,0	1/1:1,14:31:42.14:3381,42,0	1/1:1,15:42:48.16:3854,48,0	1/1:0,15:32:45.15:3627,45,0	1/1:0,1:8:3.01:242,3,0	1/1:0,1:5:3.01:242,3,0	1/1:0,4:27:78.25:4092,78,0	1/1:0,11:24:42.14:3034,42,0	1/1:8,0:14:24.05:708,24,0	1/1:1,12:33:36.12:2842,36,0	1/1:0,6:16:17.85:1449,18,0	1/1:5,0:7:6.02:417,6,0	1/1:0,8:16:24.08:1934,24,0	1/1:0,17:34:99:6365,99,0	1/1:0,20:34:69.24:5548,69,0	1/1:0,4:4:12.04:968,12,0
chr10	28074995	.	CT	C	9126.85	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-4.665;DP=489;FS=39.190;HRun=10;HaplotypeScore=56.1979;InbreedingCoeff=0.9415;MQ=71.80;MQ0=0;MQRankSum=-3.121;QD=19.84;ReadPosRankSum=3.793;VQSLOD=3.1268;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,24:26:65.97:573,66,0	1/1:1,8:9:23.98:208,24,0	0/0:13,1:13:8.93:0,9,217	0/0:15,0:12:12.18:0,12,175	1/1:2,22:24:56.96:495,57,0	1/1:3,20:23:23.80:435,24,0	1/1:1,7:8:17.99:156,18,0	1/1:4,20:24:56.62:516,57,0	1/1:2,15:17:35.98:312,36,0	1/1:2,17:19:50.97:439,51,0	1/1:2,15:17:41.99:365,42,0	1/1:2,10:12:26.99:234,27,0	1/1:1,10:11:23.99:208,24,0	1/1:1,11:12:26.98:234,27,0	1/1:1,21:22:53.99:469,54,0	1/1:2,17:19:50.99:442,51,0	1/1:19,0:19:38.46:196,38,0	1/1:19,0:18:22.97:118,23,0	1/1:4,13:17:38.97:338,39,0	1/1:3,23:26:35.71:470,36,0	1/1:3,10:13:26.99:234,27,0	1/1:2,17:19:50.98:443,51,0	1/1:0,14:14:35.99:313,36,0	1/1:0,13:13:38.99:339,39,0	1/1:2,15:17:38.99:339,39,0	1/1:2,19:21:56.98:495,57,0	1/1:5,18:23:44.99:391,45,0	1/1:2,14:15:41.78:364,42,0
chr10	28075155	.	G	GC	172.79	PASS	AC=4;AF=0.074;AN=54;BaseQRankSum=6.115;DP=333;FS=3.978;HRun=0;HaplotypeScore=52.3276;InbreedingCoeff=0.7909;MQ=65.82;MQ0=1;MQRankSum=-6.097;QD=10.80;ReadPosRankSum=0.585;VQSLOD=3.0777;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:27.08:0,27,360	./.	0/0:14,0:10:28.35:0,28,303	0/0:15,0:15:38.96:0,39,484	0/0:15,0:15:39.11:0,39,506	0/0:15,0:15:45.14:0,45,612	0/0:12,0:12:36.11:0,36,487	0/0:18,0:18:54.13:0,54,664	0/0:12,0:12:36.12:0,36,502	0/0:8,0:8:24.06:0,24,305	0/0:8,0:8:24.08:0,24,335	0/0:13,0:13:36.10:0,36,484	0/0:10,0:10:30.07:0,30,370	0/0:11,0:11:30.06:0,30,368	0/0:25,0:25:72.22:0,72,975	0/0:6,0:6:18.06:0,18,251	1/1:1,6:7:17.63:113,18,0	1/1:1,8:9:0.69:163,1,0	0/0:15,0:15:44.18:0,44,592	0/0:8,0:8:21.04:0,21,259	0/0:33,0:33:93.02:0,93,1212	0/0:11,0:11:30.09:0,30,402	0/0:7,0:7:21.05:0,21,273	0/0:20,0:20:60.12:0,60,781	0/0:14,0:14:42.14:0,42,585	0/0:9,0:9:24.08:0,24,335	0/0:7,0:7:21.07:0,21,292	0/0:2,0:2:6.02:0,6,84
chr10	28075161	.	GAGGGC	G	593.99	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.238;DP=345;FS=2.275;HRun=0;HaplotypeScore=75.7011;InbreedingCoeff=0.8513;MQ=64.27;MQ0=0;MQRankSum=-6.320;QD=37.12;ReadPosRankSum=2.022;VQSLOD=3.4339;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:36.12:0,36,1059	0/0:1,0:1:3.01:0,3,49	0/0:10,0:9:24.07:0,24,641	0/0:17,0:17:51.13:0,51,1225	0/0:15,0:15:39.13:0,39,1228	0/0:15,0:15:45.15:0,45,1376	0/0:14,0:14:42.14:0,42,1290	0/0:20,0:20:60.21:0,60,1617	0/0:12,0:12:36.12:0,36,995	0/0:6,0:6:18.06:0,18,564	0/0:9,0:9:27.06:0,27,781	0/0:12,0:12:33.11:0,33,1044	0/0:8,0:8:24.08:0,24,689	0/0:11,0:11:27.09:0,27,823	0/0:26,0:26:78.27:0,78,2445	0/0:7,0:7:21.07:0,21,610	1/1:1,6:7:18.06:272,18,0	1/1:1,8:9:27.09:441,27,0	0/0:16,0:16:48.16:0,48,1385	0/0:7,0:7:18.06:0,18,513	0/0:38,0:38:99:0,114,3235	0/0:11,0:11:30.10:0,30,885	0/0:6,0:6:18.06:0,18,558	0/0:21,0:21:63.22:0,63,1926	0/0:14,0:14:42.14:0,42,1310	0/0:11,0:11:33.11:0,33,948	0/0:7,0:7:21.07:0,21,669	0/0:2,0:2:6.02:0,6,191
chr10	28075682	.	G	GA	11669.98	PASS	AB=0.597;AC=47;AF=0.839;AN=56;BaseQRankSum=-2.754;DP=606;FS=14.540;HRun=10;HaplotypeScore=109.3643;InbreedingCoeff=0.3019;MQ=74.76;MQ0=0;MQRankSum=-2.201;QD=20.09;ReadPosRankSum=0.995;VQSLOD=4.0245;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,16:24:36.09:384,36,0	0/1:1,6:7:9.61:113,0,10	0/0:16,0:16:17.78:0,18,134	0/0:8,0:9:17.97:0,18,147	1/1:5,23:28:66.09:680,66,0	1/1:5,22:26:51.09:532,51,0	1/1:6,14:21:7.59:321,8,0	1/1:5,25:30:69.14:720,69,0	1/1:1,10:11:24.06:256,24,0	0/1:12,12:24:10.22:296,0,10	1/1:7,22:31:38.58:542,39,0	1/1:2,25:27:60.15:639,60,0	0/1:8,20:28:17.22:367,0,17	0/1:4,13:17:16.20:255,0,16	1/1:3,13:16:17.46:391,17,0	1/1:6,18:24:20.47:423,20,0	1/1:4,23:27:33.75:554,34,0	1/1:2,12:14:11.30:292,11,0	1/1:3,7:10:20.99:205,21,0	1/1:6,27:34:77.16:797,77,0	1/1:2,4:6:6.02:64,6,0	1/1:10,22:32:72.15:752,72,0	0/1:9,14:24:10.02:340,0,10	1/1:2,10:12:8.44:295,8,0	1/1:3,27:30:72.17:761,72,0	1/1:6,26:32:53.49:747,53,0	1/1:7,28:34:7.27:687,7,0	1/1:1,9:10:24.06:256,24,0
chr10	28076631	.	T	TTA	1330.67	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=-5.456;DP=458;FS=1.632;HRun=0;HaplotypeScore=52.2146;InbreedingCoeff=0.8020;MQ=68.91;MQ0=0;MQRankSum=-0.342;QD=39.14;ReadPosRankSum=1.192;VQSLOD=5.2980;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:14:19.01:0,19,514	0/0:5,0:5:15.05:0,15,243	0/0:9,0:8:24.04:0,24,308	0/1:4,0:4:5.81:6,0,43	0/0:24,0:24:72.14:0,72,1003	0/0:13,0:13:39.11:0,39,584	0/0:11,0:11:33.11:0,33,534	0/0:28,0:28:81.23:0,81,1219	0/0:12,0:12:36.11:0,36,557	0/0:28,0:28:81.23:0,81,1221	0/0:21,0:21:60.20:0,60,964	0/0:24,0:24:72.22:0,72,1116	0/0:20,0:20:60.17:0,60,892	0/0:14,0:14:42.14:0,42,665	0/0:21,0:21:63.20:0,63,983	0/0:18,0:18:54.13:0,54,761	1/1:1,18:19:51.18:1029,51,0	1/1:1,9:11:21.07:421,21,0	0/0:15,0:15:45.15:0,45,705	0/0:15,0:15:39.99:0,40,590	0/0:7,0:7:21.05:0,21,314	0/0:11,0:11:30.09:0,30,459	0/0:22,0:22:66.20:0,66,1007	0/0:7,0:7:18.05:0,18,289	0/0:21,0:21:63.10:0,63,875	0/0:29,0:29:87.21:0,87,1229	0/0:28,0:28:81.14:0,81,1184	0/0:7,0:7:20.94:0,21,222
chr10	28078833	.	GTT	G	13272.46	PASS	AB=1.000;AC=49;AF=0.875;AN=56;BaseQRankSum=-9.764;DP=501;FS=15.555;HRun=10;HaplotypeScore=68.2788;InbreedingCoeff=0.8586;MQ=71.99;MQ0=1;MQRankSum=-0.476;QD=29.69;ReadPosRankSum=1.610;VQSLOD=3.5707;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,25:27:71.98:782,72,0	1/1:1,15:16:42.11:468,42,0	0/0:13,0:11:26.68:0,27,369	0/1:5,0:6:5.72:6,0,111	1/1:3,27:30:81.21:901,81,0	1/1:0,16:16:45.12:502,45,0	1/1:0,9:9:21.06:234,21,0	1/1:1,27:28:78.20:869,78,0	1/1:1,10:11:30.08:333,30,0	1/1:1,22:23:66.17:734,66,0	1/1:1,22:23:66.14:723,66,0	1/1:1,12:13:33.09:368,33,0	1/1:3,14:17:42.10:468,42,0	1/1:1,11:12:30.08:334,30,0	1/1:1,17:18:51.14:569,51,0	1/1:1,17:18:48.13:535,48,0	0/0:6,0:27:49.91:0,50,172	0/0:3,0:14:22.18:0,22,76	1/1:2,19:21:57.15:635,57,0	1/1:5,37:41:99:1199,108,0	1/1:0,5:5:15.04:167,15,0	1/1:0,12:12:36.10:401,36,0	1/1:1,19:20:57.15:636,57,0	1/1:1,12:13:30.08:334,30,0	1/1:2,16:18:45.12:502,45,0	1/1:3,20:23:63.16:702,63,0	1/1:0,22:22:66.18:736,66,0	1/1:0,4:4:12.03:134,12,0
chr10	28082134	.	A	AT	8760.93	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=5.727;DP=294;FS=6.452;HRun=2;HaplotypeScore=39.8018;InbreedingCoeff=0.8567;MQ=64.58;MQ0=1;MQRankSum=-1.115;QD=35.91;ReadPosRankSum=1.037;VQSLOD=4.8209;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,11:11:30.10:431,30,0	1/1:1,5:6:15.05:215,15,0	0/0:10,0:6:11.35:0,11,123	0/0:3,0:2:5.95:0,6,53	1/1:1,10:11:30.10:430,30,0	1/1:2,14:16:42.11:580,42,0	1/1:0,7:7:21.07:302,21,0	1/1:4,25:29:75.15:967,75,0	1/1:0,7:7:21.07:302,21,0	1/1:0,16:16:48.09:611,48,0	1/1:0,11:11:33.03:447,33,0	1/1:0,7:7:18.06:259,18,0	1/1:1,9:10:24.08:344,24,0	1/1:0,6:6:15.05:216,15,0	1/1:2,6:8:12.04:173,12,0	1/1:1,7:8:18.06:259,18,0	0/0:27,0:27:75.16:0,75,872	0/0:10,0:10:23.50:0,24,307	1/1:1,14:15:45.12:603,45,0	1/1:0,8:8:21.07:301,21,0	1/1:0,6:6:9.03:129,9,0	1/1:0,3:3:9.03:129,9,0	1/1:0,7:7:21.07:302,21,0	1/1:2,0:2:3.01:41,3,0	1/1:1,9:10:24.08:343,24,0	1/1:1,10:11:30.10:429,30,0	1/1:2,16:18:45.15:646,45,0	1/1:0,11:11:21.07:302,21,0
chr10	28082402	.	CAAG	C	22562.17	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=6.828;DP=597;FS=16.746;HRun=0;HaplotypeScore=169.9625;InbreedingCoeff=0.9686;MQ=83.74;MQ0=0;MQRankSum=-10.720;QD=41.02;ReadPosRankSum=6.360;VQSLOD=4.9395;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,43:44:99:1810,108,0	1/1:0,11:11:27.09:460,27,0	0/0:23,0:23:63.21:0,63,1360	0/0:24,0:24:63.21:0,63,1346	1/1:1,14:15:30.10:511,30,0	1/1:4,15:19:39.13:665,39,0	1/1:2,20:22:48.12:787,48,0	1/1:2,32:34:96.30:1582,96,0	1/1:0,16:16:39.12:665,39,0	1/1:1,19:20:57.20:972,57,0	1/1:0,10:10:27.09:460,27,0	1/1:2,19:21:48.16:818,48,0	1/1:1,29:30:75.26:1278,75,0	1/1:2,26:28:72.25:1227,72,0	1/1:2,27:29:72.25:1228,72,0	1/1:1,30:31:81.27:1381,81,0	1/1:0,33:33:84.29:1432,84,0	1/1:1,13:14:36.12:614,36,0	1/1:2,14:16:42.14:703,42,0	1/1:1,11:12:33.08:532,33,0	1/1:1,24:25:39.09:634,39,0	1/1:0,10:10:27.09:460,27,0	1/1:1,14:15:33.11:563,33,0	1/1:2,21:22:45.15:767,45,0	1/1:1,18:19:48.16:818,48,0	1/1:1,18:19:48.16:814,48,0	1/1:2,27:29:72.25:1227,72,0	1/1:0,5:5:9.03:153,9,0
chr10	28082956	.	AGCCCG	A	20270.63	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=6.178;DP=563;FS=9.278;HRun=0;HaplotypeScore=141.7705;InbreedingCoeff=0.9888;MQ=80.56;MQ0=1;MQRankSum=-12.472;QD=42.41;ReadPosRankSum=2.182;VQSLOD=4.8612;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,29:32:69.11:1332,69,0	1/1:0,12:12:27.09:584,27,0	0/0:21,0:21:48.16:0,48,1309	0/0:28,0:28:36.10:0,36,1527	1/1:2,20:22:41.88:668,42,0	1/1:3,22:25:54.14:1123,54,0	1/1:6,18:24:48.08:948,48,0	1/1:6,17:23:45.05:754,45,0	1/1:1,13:14:33.11:714,33,0	1/1:3,18:21:42.08:803,42,0	1/1:3,11:14:30.02:559,30,0	1/1:2,25:27:69.19:1446,69,0	1/1:4,25:29:66.23:1400,66,0	1/1:0,13:13:36.12:778,36,0	1/1:1,21:22:42.14:908,42,0	1/1:1,24:25:60.21:1298,60,0	0/0:28,0:27:78.27:0,78,2461	0/0:7,0:7:21.07:0,21,666	1/1:5,13:18:39:544,39,0	1/1:2,16:18:44.95:764,45,0	1/1:5,11:16:16.84:255,17,0	1/1:2,13:15:35.99:640,36,0	1/1:4,12:16:39.08:758,39,0	1/1:2,15:17:18.53:362,19,0	1/1:4,23:27:66.01:1203,66,0	1/1:3,20:23:57.18:1195,57,0	1/1:2,16:18:42.14:909,42,0	1/1:0,7:7:15.05:325,15,0
chr10	28083413	.	G	GAA	21231.79	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=9.247;DP=625;FS=1.044;HRun=7;HaplotypeScore=160.8905;InbreedingCoeff=0.8831;MQ=68.43;MQ0=0;MQRankSum=-5.011;QD=39.46;ReadPosRankSum=-0.978;VQSLOD=2.8345;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,30:38:81.23:1279,81,0	1/1:1,8:9:27.05:413,27,0	0/0:21,0:18:23.99:0,24,252	0/0:14,0:12:0.61:0,1,61	1/1:3,28:32:86.70:1323,87,0	1/1:2,24:26:75.26:1222,75,0	1/1:5,10:16:41.51:562,42,0	1/1:1,27:28:81.28:1316,81,0	1/1:2,19:21:54.18:886,54,0	1/1:8,27:35:75.26:1230,75,0	1/1:4,17:21:54.18:876,54,0	1/1:6,16:22:57.07:844,57,0	1/1:1,14:16:42.14:689,42,0	1/1:5,27:32:84.24:1347,84,0	1/1:4,16:20:48.16:785,48,0	1/1:4,14:18:39.13:631,39,0	0/0:26,0:26:78.23:0,78,909	0/0:26,0:26:75.22:0,75,874	1/1:1,13:14:39.13:640,39,0	1/1:5,23:28:75.18:1162,75,0	1/1:2,5:7:6.02:98,6,0	1/1:5,20:25:54.18:885,54,0	1/1:2,23:26:75.26:1219,75,0	1/1:4,6:10:12.04:196,12,0	1/1:4,31:35:81.23:1299,81,0	1/1:2,24:26:69.24:1130,69,0	1/1:5,21:25:63.17:1003,63,0	1/1:1,6:7:12.04:197,12,0
chr10	28083737	.	TC	T	23634.64	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=3.920;DP=835;FS=0.000;HRun=3;HaplotypeScore=123.5141;InbreedingCoeff=0.9998;MQ=88.05;MQ0=0;MQRankSum=-10.721;QD=32.51;ReadPosRankSum=4.605;VQSLOD=3.8831;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,52:53:99:1821,147,0	1/1:0,11:11:30.09:372,30,0	0/0:33,0:33:93.25:0,93,1270	0/0:32,0:32:84.25:0,84,1145	1/1:2,34:36:90.22:1096,90,0	1/1:0,26:26:66.21:817,66,0	1/1:1,29:30:81.25:1003,81,0	1/1:1,27:28:81.20:952,81,0	1/1:1,34:35:99:1263,102,0	1/1:0,39:39:99:1400,117,0	1/1:0,23:23:63.08:744,63,0	1/1:2,38:40:99:1245,102,0	1/1:2,42:44:99:1506,123,0	1/1:0,41:41:99:1338,108,0	1/1:1,38:39:99:1412,114,0	1/1:1,42:43:99:1301,105,0	0/0:26,0:26:75.19:0,75,1035	0/0:17,0:17:48.16:0,48,691	1/1:2,15:17:45.12:543,45,0	1/1:0,30:30:81.10:964,81,0	1/1:2,32:34:81.25:1004,81,0	1/1:0,19:19:54.17:669,54,0	1/1:0,20:20:39.12:483,39,0	1/1:1,32:33:78.25:967,78,0	1/1:1,19:20:51.16:631,51,0	1/1:1,28:29:78.24:965,78,0	1/1:1,23:24:57.18:706,57,0	1/1:1,12:13:36.09:432,36,0
chr10	28083848	.	GTGTCAGCCAATGAGATCACGTAGAACTCATCTTTATGCATGA	G	3055.73	PASS	AC=36;AF=0.818;AN=44;BaseQRankSum=1.502;DP=455;FS=48.550;HRun=0;HaplotypeScore=410.2008;InbreedingCoeff=0.5853;MQ=85.61;MQ0=0;MQRankSum=-3.720;QD=10.39;ReadPosRankSum=2.064;VQSLOD=0.3146;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:17:6.02:120,6,0	./.	0/0:26,0:26:57.19:0,57,2174	0/0:29,0:28:48.16:0,48,2405	1/1:8,9:17:2.92:17,3,0	1/1:16,0:16:9.03:260,9,0	./.	1/1:11,0:11:2.96:74,3,0	1/1:15,0:15:9.01:220,9,0	1/1:9,9:18:24.07:465,24,0	./.	1/1:17,0:17:3.01:128,3,0	1/1:17,0:17:9.03:275,9,0	1/1:19,0:19:6.02:137,6,0	1/1:21,0:21:12.03:291,12,0	./.	0/0:26,0:26:69.19:0,69,8672	0/0:16,0:16:39.13:0,39,4863	./.	1/1:14,13:27:5.98:58,6,0	1/1:16,0:16:1.35:48,1,0	1/1:4,10:14:2.90:16,3,0	1/1:7,11:18:3.01:112,3,0	1/1:13,0:13:0.05:0,0,0	1/1:13,0:13:12.04:262,12,0	1/1:6,13:19:32.99:540,33,0	./.	1/1:6,0:6:6.02:178,6,0
chr10	28085669	.	A	AT	15934.69	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-5.904;DP=583;FS=1.256;HRun=6;HaplotypeScore=74.1031;InbreedingCoeff=0.9962;MQ=70.87;MQ0=0;MQRankSum=-3.577;QD=30.35;ReadPosRankSum=3.393;VQSLOD=5.4611;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,29:29:78.16:940,78,0	1/1:2,10:12:30.05:359,30,0	0/0:15,0:15:32.93:0,33,329	0/0:9,0:9:17.13:0,17,149	1/1:6,24:30:63.12:756,63,0	1/1:3,26:29:75.13:892,75,0	1/1:3,12:15:36.12:453,36,0	1/1:7,34:41:99:1213,99,0	1/1:0,17:17:42.13:528,42,0	1/1:3,22:25:69.20:847,69,0	1/1:2,26:28:63.07:738,63,0	1/1:1,18:19:54.17:679,54,0	1/1:3,11:14:36.10:439,36,0	1/1:3,14:17:42.13:528,42,0	1/1:1,18:19:48.15:603,48,0	1/1:2,22:24:66.21:830,66,0	0/0:17,0:17:42.09:0,42,428	0/0:16,0:16:36.08:0,36,366	1/1:4,15:19:45.14:566,45,0	1/1:4,29:33:87.19:1048,87,0	1/1:3,12:15:39.10:465,39,0	1/1:2,9:11:30.09:372,30,0	1/1:6,20:26:51.16:642,51,0	1/1:2,9:11:30.05:359,30,0	1/1:3,11:14:36.10:439,36,0	1/1:9,26:35:81.24:1001,81,0	1/1:5,25:30:72.23:900,72,0	1/1:1,11:12:27.09:336,27,0
chr10	28085719	.	CTGTT	C	14182.67	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=5.987;DP=538;FS=3.471;HRun=0;HaplotypeScore=121.7388;InbreedingCoeff=0.9257;MQ=67.99;MQ0=3;MQRankSum=-3.228;QD=31.59;ReadPosRankSum=3.151;VQSLOD=4.5963;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:17,7:24:2.34:527,2,0	1/1:5,12:17:36.12:594,36,0	0/0:25,0:19:19.13:0,19,449	0/0:23,0:21:26.96:0,27,635	1/1:5,15:20:45.15:739,45,0	1/1:6,22:28:63.22:1040,63,0	1/1:3,5:8:15.05:247,15,0	1/1:18,7:24:15.14:507,15,0	1/1:4,10:14:30.10:483,30,0	1/1:13,7:20:30.10:492,30,0	1/1:12,22:34:69.19:1106,69,0	1/1:7,14:21:51.15:799,51,0	1/1:2,13:15:36.12:580,36,0	1/1:9,5:14:18.06:292,18,0	1/1:8,12:20:45.15:736,45,0	1/1:7,5:12:24.08:394,24,0	0/0:22,0:22:54.17:0,54,1238	0/0:19,0:19:27.25:0,27,1022	1/1:12,4:14:15.04:225,15,0	1/1:7,15:22:48.16:769,48,0	1/1:2,11:13:21.07:346,21,0	1/1:3,12:15:39.05:609,39,0	1/1:10,12:22:42.14:688,42,0	1/1:3,6:9:18.06:297,18,0	1/1:1,17:18:45.15:741,45,0	1/1:14,18:32:45.53:1036,46,0	1/1:8,10:18:39.13:639,39,0	1/1:6,6:12:18.01:297,18,0
chr10	28087360	.	A	ATATTGGTGATAGCCTAC	97324.36	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-5.393;DP=708;FS=0.416;HRun=0;HaplotypeScore=266.9293;InbreedingCoeff=0.9736;MQ=82.41;MQ0=1;MQRankSum=-14.734;QD=158.51;ReadPosRankSum=2.897;VQSLOD=4.4885;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,5:16:32.96:1542,33,0	1/1:6,3:11:20.92:975,21,0	0/0:35,0:35:96.33:0,96,3890	0/0:27,0:27:75.20:0,75,2882	1/1:23,16:40:81.06:5155,81,0	1/1:14,20:37:96.33:6604,96,0	1/1:10,11:26:60.16:4271,60,0	1/1:33,0:33:96.31:4954,96,0	1/1:8,11:22:51.17:3627,51,0	1/1:14,9:25:69.20:4516,69,0	1/1:14,7:21:44.94:2467,45,0	1/1:5,14:20:54.14:4046,54,0	1/1:16,10:28:66.23:4465,66,0	1/1:14,14:30:81.28:5648,81,0	1/1:13,12:29:65.97:4350,66,0	1/1:10,14:27:69.24:4891,69,0	0/0:22,0:22:66.18:0,66,2668	0/0:10,0:10:30.10:0,30,1490	1/1:18,2:20:57.15:2938,57,0	1/1:22,11:34:98.82:5197,99,0	1/1:9,0:9:11.95:540,12,0	1/1:15,17:35:92.99:5471,93,0	1/1:14,10:27:63.13:3812,63,0	1/1:4,6:11:24.04:1584,24,0	1/1:18,23:44:99:8170,114,0	1/1:21,13:35:96.31:6556,96,0	1/1:14,12:28:81.47:5162,81,0	1/1:3,0:3:9.03:384,9,0
chr10	28089253	.	G	GA	18438.64	PASS	AB=0.561;AC=50;AF=0.893;AN=56;BaseQRankSum=-9.025;DP=767;FS=1.937;HRun=9;HaplotypeScore=75.9848;InbreedingCoeff=0.6380;MQ=79.05;MQ0=0;MQRankSum=-8.232;QD=25.57;ReadPosRankSum=4.101;VQSLOD=5.2162;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,24:28:60.16:662,60,0	1/1:1,9:10:27.07:299,27,0	0/0:26,0:25:60.41:0,60,552	0/0:20,0:20:28.63:0,29,258	1/1:4,36:40:82.01:1057,82,0	1/1:0,21:21:60.16:664,60,0	1/1:2,22:24:51.14:564,51,0	1/1:12,30:42:89.97:945,90,0	0/1:5,22:27:28.91:622,0,29	1/1:7,21:28:63.16:688,63,0	1/1:4,26:30:46.10:723,46,0	1/1:1,21:22:54.15:597,54,0	1/1:2,18:20:54.15:597,54,0	1/1:3,24:27:60.16:662,60,0	1/1:6,24:30:66.18:730,66,0	1/1:2,29:31:84.19:916,84,0	1/1:4,29:34:57.53:791,58,0	1/1:1,17:17:45.12:498,45,0	1/1:6,18:24:44.51:602,45,0	1/1:3,36:39:99:1115,102,0	0/1:5,14:20:10.16:337,0,10	1/1:2,23:25:63.05:657,63,0	1/1:5,27:32:66.05:712,66,0	1/1:0,21:22:63:678,63,0	1/1:3,32:35:79.76:1012,80,0	1/1:6,34:40:99:1048,102,0	1/1:3,27:30:72.18:789,72,0	1/1:3,19:22:44.71:474,45,0
chr10	28091694	.	CACACACAT	C	7194.62	PASS	AB=0.994;AC=26;AF=0.464;AN=56;BaseQRankSum=4.204;DP=629;FS=1.803;HRun=0;HaplotypeScore=308.5810;InbreedingCoeff=-0.3658;MQ=52.95;MQ0=5;MQRankSum=-4.542;QD=14.45;ReadPosRankSum=1.701;VQSLOD=3.4570;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:31,0:31:80.43:252,0,80	0/1:11,0:11:6.48:216,0,6	0/0:32,0:22:36.43:0,36,411	0/0:20,0:12:22.79:0,23,176	0/1:27,1:28:12.17:308,0,12	1/1:16,0:16:13.27:148,13,0	0/1:18,0:18:46.14:46,0,126	0/0:31,0:29:45.35:0,45,535	0/1:18,0:18:48.68:267,0,49	0/1:29,0:29:99:749,0,113	0/1:18,0:18:45.51:231,0,46	0/1:24,0:24:53.55:454,0,54	0/1:29,0:29:99:407,0,104	0/1:23,0:23:28.61:532,0,29	0/1:24,0:24:52.90:394,0,53	0/1:24,0:24:15.56:495,0,16	0/0:32,0:32:67.32:0,67,2401	0/0:16,0:15:21.06:0,21,834	0/1:16,0:14:7.64:8,0,112	0/1:19,0:19:2.64:224,0,3	0/1:23,0:22:47.09:97,0,47	0/1:26,1:27:99:366,0,103	1/1:21,0:20:28.07:311,28,0	0/1:21,0:21:3.43:134,0,3	0/1:18,1:19:40.20:313,0,40	0/1:30,0:30:99:583,0,107	1/1:21,1:22:9.58:608,10,0	0/1:7,0:6:34.32:53,0,34
chr10	28091702	.	TACACACAC	T	13580.60	PASS	AB=0.854;AC=43;AF=0.796;AN=54;BaseQRankSum=-0.209;DP=658;FS=0.000;HRun=0;HaplotypeScore=284.2803;InbreedingCoeff=0.5690;MQ=47.57;MQ0=10;MQRankSum=0.528;QD=25.48;ReadPosRankSum=1.264;VQSLOD=4.0430;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:27,5:32:34.33:568,34,0	1/1:5,4:9:18.05:378,18,0	./.	0/0:17,0:9:5.98:0,6,58	1/1:22,7:29:35.45:603,35,0	1/1:13,3:17:20.89:316,21,0	1/1:19,2:20:24:296,24,0	0/0:31,0:29:21.97:0,22,206	1/1:14,6:21:30.03:507,30,0	1/1:17,13:31:63.65:1315,64,0	1/1:13,5:18:27.05:477,27,0	1/1:18,9:27:30.79:774,31,0	1/1:24,9:33:27.34:729,27,0	1/1:13,9:24:31.15:815,31,0	0/1:19,7:26:7.06:656,0,7	1/1:7,11:19:36.08:764,36,0	0/0:31,0:33:73.71:0,74,2183	0/0:15,0:16:37.52:0,38,839	1/1:13,0:11:0.81:105,1,0	1/1:24,4:27:36.04:624,36,0	1/1:29,1:26:7.79:324,8,0	1/1:19,9:28:5.97:626,6,0	1/1:17,5:24:42.10:691,42,0	1/1:21,1:22:14.82:259,15,0	0/1:12,5:17:19.02:492,0,19	1/1:22,9:31:61.02:1129,61,0	1/1:12,10:22:51.07:955,51,0	0/1:9,0:8:42.36:176,0,42
chr10	28092997	.	TA	T	1429.31	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.466;DP=259;FS=4.320;HRun=1;HaplotypeScore=24.6891;InbreedingCoeff=0.7131;MQ=59.91;MQ0=4;MQRankSum=0.053;QD=36.65;ReadPosRankSum=0.240;VQSLOD=2.9378;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:30.10:0,30,434	0/0:6,0:6:17.95:0,18,240	0/0:5,0:4:5.27:0,5,88	0/0:3,0:2:2.74:0,3,12	0/0:9,0:9:27.09:0,27,404	0/0:9,0:9:27.06:0,27,381	0/0:2,0:2:6.02:0,6,90	0/0:19,0:19:54.15:0,54,737	0/0:3,0:3:9.03:0,9,135	0/0:18,0:18:51.17:0,51,762	0/0:6,0:6:18.04:0,18,248	0/0:3,0:3:9.03:0,9,135	0/0:11,0:11:33.09:0,33,473	0/0:8,0:8:24.08:0,24,358	0/0:10,0:10:30.06:0,30,405	0/0:11,0:11:33.11:0,33,494	1/1:0,24:24:66.22:922,66,0	1/1:0,15:15:45.15:628,45,0	0/0:18,0:13:39.12:0,39,550	0/0:11,0:11:33.11:0,33,494	0/0:3,0:3:9.01:0,9,113	0/0:8,0:8:24.08:0,24,359	0/0:4,0:4:12.04:0,12,179	0/0:2,0:2:6.02:0,6,90	0/0:13,0:13:39.12:0,39,563	0/0:8,0:8:24.08:0,24,360	0/0:13,0:13:39.13:0,39,583	0/0:6,0:6:18.06:0,18,269
chr10	28093593	.	GA	G	431.52	PASS	AB=0.857;AC=5;AF=0.089;AN=56;BaseQRankSum=5.693;DP=701;FS=3.267;HRun=10;HaplotypeScore=73.8197;InbreedingCoeff=0.7874;MQ=64.57;MQ0=0;MQRankSum=0.313;QD=13.08;ReadPosRankSum=0.461;VQSLOD=3.7252;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,3:37:64.11:0,64,898	0/0:13,0:13:33.05:0,33,352	0/0:19,0:18:39.10:0,39,365	0/1:5,1:6:12.83:13,0,67	0/0:38,0:41:99:0,117,1195	0/0:30,0:30:78.20:0,78,855	0/0:25,1:26:51.64:0,52,780	0/0:34,0:36:89.90:0,90,950	0/0:26,1:27:49.19:0,49,753	0/0:31,1:32:46.15:0,46,762	0/0:25,0:25:59.65:0,60,636	0/0:14,0:14:34.06:0,34,387	0/0:32,0:33:84.01:0,84,883	0/0:18,0:19:53.95:0,54,560	0/0:29,0:29:67.42:0,67,731	0/0:28,0:30:78.08:0,78,843	1/1:0,16:16:35.99:313,36,0	1/1:0,11:11:26.99:234,27,0	0/0:20,0:20:45.12:0,45,496	0/0:29,0:29:75.19:0,75,819	0/0:19,0:20:56.98:0,57,608	0/0:19,1:20:28.01:0,28,517	0/0:38,3:41:24.05:0,24,918	0/0:23,0:24:72.11:0,72,770	0/0:30,0:30:75.18:0,75,814	0/0:35,0:35:96.22:0,96,1040	0/0:25,0:26:69.01:0,69,737	0/0:11,0:11:30:0,30,287
chr10	28093812	.	C	CTGTGTGTGTG	11628.20	PASS	AB=0.819;AC=50;AF=0.893;AN=56;BaseQRankSum=-1.873;DP=840;FS=15.731;HRun=0;HaplotypeScore=263.1428;InbreedingCoeff=0.2275;MQ=57.81;MQ0=9;MQRankSum=1.304;QD=15.10;ReadPosRankSum=1.432;VQSLOD=2.2817;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:42,0:42:29.95:604,30,0	1/1:6,0:6:3.01:119,3,0	0/0:36,0:23:2.84:0,3,14	0/0:34,0:24:5.98:0,6,72	1/1:31,0:30:36.07:821,36,0	1/1:41,0:41:50.82:1241,51,0	0/1:16,7:29:12.97:113,0,13	1/1:44,0:43:36.05:681,36,0	1/1:11,18:39:15.04:622,15,0	1/1:34,0:33:52.48:1050,52,0	1/1:15,0:13:2.58:74,3,0	1/1:20,0:20:26.98:469,27,0	1/1:16,9:38:6.49:240,6,0	1/1:9,16:33:9.03:414,9,0	1/1:9,17:35:8.29:298,8,0	1/1:13,19:38:20.99:920,21,0	1/1:22,0:25:18.93:288,19,0	0/1:17,0:18:18.87:240,0,19	1/1:12,0:15:20.28:548,20,0	1/1:12,12:36:2.96:114,3,0	1/1:40,0:39:26.83:567,27,0	1/1:25,0:23:13.75:340,14,0	1/1:12,10:33:2.65:102,3,0	1/1:12,0:34:2.79:59,3,0	1/1:4,12:26:3.01:116,3,0	1/1:10,10:32:54.14:1240,54,0	1/1:15,12:31:5.96:269,6,0	1/1:6,0:6:4.83:78,5,0
chr10	28093831	.	T	TGTGTGTGTGT	9268.72	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-2.289;DP=818;FS=4.553;HRun=0;HaplotypeScore=222.1790;InbreedingCoeff=0.3213;MQ=48.30;MQ0=17;MQRankSum=1.424;QD=12.59;ReadPosRankSum=3.031;VQSLOD=3.7164;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:44,0:45:20.89:282,21,0	1/1:3,8:12:2.81:118,3,0	0/0:35,0:13:2.79:0,3,14	0/0:47,0:16:5.98:0,6,72	1/1:29,0:28:30.02:608,30,0	1/1:41,0:41:39.10:742,39,0	1/1:31,0:31:3.01:119,3,0	1/1:31,0:30:33.02:496,33,0	1/1:36,0:36:15.04:622,15,0	1/1:30,0:29:51.32:714,51,0	1/1:15,0:13:2.37:74,2,0	1/1:22,0:22:26.98:434,27,0	1/1:32,0:31:6.49:239,6,0	1/1:29,0:29:9.03:414,9,0	1/1:34,0:34:8.29:298,8,0	1/1:35,0:35:20.99:920,21,0	1/1:25,0:25:17.47:244,17,0	1/1:15,0:15:17.50:163,17,0	1/1:16,0:14:20.28:409,20,0	1/1:34,0:34:3.01:114,3,0	1/1:43,0:42:23.81:506,24,0	1/1:23,0:21:4.71:123,5,0	1/1:34,0:33:2.73:102,3,0	1/1:30,0:30:2.35:58,2,0	1/1:26,0:26:3.01:116,3,0	1/1:32,0:32:48.05:1006,48,0	1/1:32,0:32:5.96:269,6,0	1/1:4,0:4:4.83:78,5,0
chr10	28101847	.	G	GT	216.01	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.624;DP=655;FS=1.181;HRun=0;HaplotypeScore=66.2323;InbreedingCoeff=0.9370;MQ=83.72;MQ0=0;MQRankSum=-5.579;QD=18.00;ReadPosRankSum=1.073;VQSLOD=5.8447;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:65.73:0,66,905	0/0:8,0:8:21.07:0,21,293	0/0:21,0:21:63.20:0,63,848	0/0:23,0:23:63.21:0,63,866	0/0:37,0:37:99:0,102,1427	0/0:29,0:29:87.29:0,87,1214	0/0:26,0:26:75.21:0,75,997	0/0:29,0:29:81.25:0,81,1090	0/0:19,0:19:57.19:0,57,796	0/0:24,0:24:69.19:0,69,943	0/0:31,0:31:81.26:0,81,1116	0/0:18,0:18:51.17:0,51,709	0/0:29,0:29:81.27:0,81,1130	0/0:27,0:27:75.25:0,75,1049	0/0:32,0:32:96.32:0,96,1339	0/0:19,0:19:54.18:0,54,755	1/1:0,9:9:24.04:237,24,0	1/1:0,3:3:9.02:93,9,0	0/0:25,0:25:72.24:0,72,1004	0/0:27,0:27:81.27:0,81,1132	0/0:36,0:36:99:0,105,1433	0/0:28,0:28:81.27:0,81,1130	0/0:22,0:22:66.22:0,66,921	0/0:18,0:18:51.17:0,51,712	0/0:28,0:28:78.26:0,78,1090	0/0:26,0:26:75.23:0,75,1019	0/0:33,0:33:99:0,99,1383	0/0:3,0:3:9.03:0,9,126
chr10	28101848	.	A	AACTT	587.96	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.384;DP=659;FS=1.181;HRun=0;HaplotypeScore=108.4350;InbreedingCoeff=0.9371;MQ=84.15;MQ0=0;MQRankSum=-5.614;QD=45.23;ReadPosRankSum=1.126;VQSLOD=4.3805;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:65.82:0,66,1330	0/0:8,0:8:21.07:0,21,436	0/0:22,0:22:63.21:0,63,1219	0/0:23,0:23:63.19:0,63,1223	0/0:37,0:37:99:0,102,2137	0/0:29,0:29:87.30:0,87,1822	0/0:25,0:25:72.20:0,72,1380	0/0:28,0:28:81.26:0,81,1620	0/0:19,0:19:57.20:0,57,1195	0/0:24,0:24:72.24:0,72,1453	0/0:30,0:30:78.26:0,78,1598	0/0:18,0:18:54.11:0,54,939	0/0:29,0:29:87.24:0,87,1706	0/0:28,0:28:78.23:0,78,1555	0/0:32,0:32:96.29:0,96,1880	0/0:19,0:19:57.18:0,57,1157	1/1:1,9:10:24.04:492,24,0	1/1:0,3:3:9.03:210,9,0	0/0:25,0:25:72.25:0,72,1510	0/0:27,0:27:81.28:0,81,1696	0/0:38,0:38:99:0,105,2070	0/0:28,0:28:84.24:0,84,1646	0/0:25,0:25:66.20:0,66,1307	0/0:18,0:18:54.12:0,54,1050	0/0:27,0:27:81.18:0,81,1611	0/0:26,0:26:78.26:0,78,1570	0/0:33,0:33:99:0,99,2036	0/0:3,0:3:9.03:0,9,189
chr10	28102233	.	A	ATGAGG	9631.48	PASS	AB=1.000;AC=46;AF=0.958;AN=48;BaseQRankSum=1.789;DP=344;FS=16.868;HRun=0;HaplotypeScore=409.2948;InbreedingCoeff=0.1116;MQ=62.14;MQ0=0;MQRankSum=-3.233;QD=30.00;ReadPosRankSum=2.582;VQSLOD=4.0198;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,0:11:15.05:248,15,0	1/1:8,0:8:18.03:293,18,0	0/1:6,0:6:46.49:53,0,46	0/1:9,0:9:23.89:168,0,24	1/1:13,0:13:9.02:138,9,0	1/1:13,0:13:12.04:230,12,0	1/1:5,0:5:11.53:205,12,0	1/1:13,0:13:30.03:536,30,0	1/1:9,0:9:14.71:244,15,0	1/1:19,0:18:36.02:696,36,0	1/1:21,0:21:39.12:746,39,0	1/1:15,0:15:18.05:330,18,0	1/1:16,0:16:35.91:650,36,0	1/1:17,0:16:27.09:544,27,0	1/1:16,0:16:33.58:673,34,0	1/1:15,0:15:38.91:695,39,0	1/1:5,0:5:0.47:1,0,0	./.	1/1:6,0:6:18.05:291,18,0	./.	1/1:7,0:7:6.02:152,6,0	1/1:19,0:19:24.08:477,24,0	1/1:20,0:20:18.06:317,18,0	./.	1/1:20,0:20:27.09:551,27,0	1/1:19,0:19:36.10:681,36,0	1/1:18,0:18:41.67:713,42,0	./.
chr10	28102495	.	T	TAGGGAAGAAGATGGAGAAAGTGCT	57383.22	PASS	AB=0.771;AC=54;AF=0.964;AN=56;BaseQRankSum=-4.553;DP=362;FS=24.786;HRun=0;HaplotypeScore=389.2805;InbreedingCoeff=-0.0331;MQ=67.91;MQ0=0;MQRankSum=-1.471;QD=158.52;ReadPosRankSum=1.638;VQSLOD=3.8413;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:11:15.05:1056,15,0	1/1:9,0:9:16.67:1020,17,0	0/1:9,1:9:1.15:1895,0,1	0/1:5,0:4:4:1266,0,4	1/1:14,0:14:38.80:2610,39,0	1/1:8,0:8:20.94:1570,21,0	1/1:13,0:13:36.08:2508,36,0	1/1:9,0:9:21.07:973,21,0	1/1:13,0:13:34.87:2258,35,0	1/1:19,0:19:43.03:3527,43,0	1/1:13,0:13:25.65:2391,26,0	1/1:17,0:17:35.12:2078,35,0	1/1:16,0:16:27.02:2249,27,0	1/1:19,0:18:41.72:3441,42,0	1/1:14,0:14:23.40:1591,23,0	1/1:15,0:15:33.22:2362,33,0	1/1:12,0:12:24.08:1432,24,0	1/1:1,0:1:3.01:287,3,0	1/1:6,0:6:15.05:1185,15,0	1/1:22,0:22:56.81:3851,57,0	1/1:7,0:7:15.01:904,15,0	1/1:19,0:19:50.84:3297,51,0	1/1:22,0:22:49.75:3904,50,0	1/1:5,0:5:4.46:393,4,0	1/1:26,0:25:57.21:4632,57,0	1/1:17,0:17:51.17:3311,51,0	1/1:14,0:14:29.99:1373,30,0	1/1:1,0:1:2.92:17,3,0
chr10	28102513	.	C	CA	533.62	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-2.023;DP=484;FS=6.792;HRun=2;HaplotypeScore=82.6113;InbreedingCoeff=0.9283;MQ=72.57;MQ0=0;MQRankSum=-1.028;QD=28.09;ReadPosRankSum=-0.482;VQSLOD=2.7028;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:39.10:0,39,468	0/0:9,0:9:24.08:0,24,297	0/0:20,0:16:24.21:0,24,506	0/0:10,0:7:20.19:0,20,221	0/0:17,0:17:40.16:0,40,516	0/0:11,0:11:30.09:0,30,371	0/0:15,0:15:42.13:0,42,519	0/0:18,0:18:51.15:0,51,622	0/0:21,0:21:54.14:0,54,643	0/0:22,0:22:63.20:0,63,780	0/0:13,0:13:33.10:0,33,408	0/0:24,0:24:66.21:0,66,815	0/0:19,0:19:51.09:0,51,609	0/0:22,0:21:51.16:0,51,630	0/0:18,0:18:42.13:0,42,520	0/0:19,0:19:51.16:0,51,631	1/1:0,15:15:39.13:559,39,0	1/1:1,3:4:6.02:86,6,0	0/0:16,0:16:39.12:0,39,483	0/0:25,0:25:69.19:0,69,839	0/0:13,0:13:36.11:0,36,446	0/0:23,0:23:63.20:0,63,775	0/0:26,0:26:72.23:0,72,889	0/0:8,0:8:15.05:0,15,185	0/0:32,0:31:90.28:0,90,1114	0/0:23,0:23:69.22:0,69,855	0/0:16,0:16:45.14:0,45,556	0/0:7,0:7:21.07:0,21,260
chr10	28102669	.	A	AGG	2377.86	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-9.757;DP=662;FS=4.734;HRun=0;HaplotypeScore=83.3883;InbreedingCoeff=0.9958;MQ=75.96;MQ0=1;MQRankSum=0.263;QD=46.62;ReadPosRankSum=3.788;VQSLOD=5.0981;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,138,2207	0/0:14,0:14:42.12:0,42,659	0/0:15,0:14:37.65:0,38,536	0/0:20,0:20:53.24:0,53,677	0/0:24,0:24:69.24:0,69,1116	0/0:21,0:21:60.20:0,60,979	0/0:23,0:23:66.23:0,66,1062	0/0:28,0:28:84.29:0,84,1361	0/0:23,0:23:57.19:0,57,921	0/0:22,0:22:66.23:0,66,1074	0/0:21,0:21:54.18:0,54,880	0/0:30,0:30:87.28:0,87,1385	0/0:19,0:19:54.17:0,54,844	0/0:28,0:28:81.28:0,81,1305	0/0:20,0:20:54.18:0,54,876	0/0:24,0:24:66.21:0,66,1052	1/1:2,30:34:84.29:1707,84,0	1/1:1,16:17:39.13:793,39,0	0/0:32,0:32:93.32:0,93,1500	0/0:24,0:24:66.23:0,66,1070	0/0:29,0:29:87.24:0,87,1362	0/0:21,0:21:54.18:0,54,877	0/0:26,0:26:75.24:0,75,1193	0/0:22,0:22:54.18:0,54,881	0/0:23,0:23:69.24:0,69,1124	0/0:23,0:23:69.24:0,69,1123	0/0:24,0:24:69.24:0,69,1124	0/0:6,0:6:18.06:0,18,293
chr10	28104327	.	TGA	T	1440.53	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.918;DP=757;FS=2.230;HRun=0;HaplotypeScore=87.5459;InbreedingCoeff=0.9993;MQ=79.06;MQ0=0;MQRankSum=-1.249;QD=40.01;ReadPosRankSum=0.929;VQSLOD=5.4008;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:87.30:0,87,1665	0/0:13,0:13:39.13:0,39,754	0/0:16,0:16:48.16:0,48,925	0/0:19,0:19:54.19:0,54,1025	0/0:31,0:31:90.31:0,90,1738	0/0:31,0:31:93.32:0,93,1776	0/0:19,0:19:57.15:0,57,1050	0/0:27,0:27:81.28:0,81,1551	0/0:32,0:32:93.30:0,93,1751	0/0:28,0:28:84.29:0,84,1619	0/0:36,0:36:99:0,108,2077	0/0:25,0:25:72.25:0,72,1373	0/0:37,0:37:99:0,105,2017	0/0:30,0:30:90.31:0,90,1726	0/0:32,0:32:96.33:0,96,1855	0/0:38,0:38:99:0,111,2088	1/1:0,24:24:69.23:1057,69,0	1/1:0,12:12:33.11:505,33,0	0/0:18,0:18:48.16:0,48,927	0/0:39,0:39:99:0,117,2252	0/0:17,0:17:51.16:0,51,952	0/0:35,0:35:99:0,102,1962	0/0:41,0:41:99:0,123,2342	0/0:20,0:20:60.21:0,60,1159	0/0:33,0:33:96.33:0,96,1848	0/0:35,0:34:99:0,99,1913	0/0:31,0:30:90.29:0,90,1696	0/0:9,0:9:27.08:0,27,475
chr10	28104548	.	TGACGA	T	1700.06	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=2.564;DP=792;FS=0.000;HRun=0;HaplotypeScore=213.3230;InbreedingCoeff=0.9918;MQ=83.29;MQ0=0;MQRankSum=-6.913;QD=45.95;ReadPosRankSum=-0.543;VQSLOD=3.1417;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,135,4206	0/0:17,0:17:48.16:0,48,1521	0/0:25,0:25:72.25:0,72,2113	0/0:22,0:22:57.16:0,57,1507	0/0:33,0:33:99:0,99,3133	0/0:23,0:23:69.24:0,69,2159	0/0:24,0:24:72.25:0,72,2228	0/0:43,0:43:99:0,117,3559	0/0:40,0:40:99:0,117,3488	0/0:23,0:23:63.22:0,63,1940	0/0:19,0:19:51.18:0,51,1606	0/0:28,0:28:84.29:0,84,2558	0/0:30,0:30:90.31:0,90,2854	0/0:36,0:36:99:0,102,3196	0/0:44,0:44:99:0,129,4019	0/0:40,0:40:99:0,117,3567	1/1:0,24:24:48.16:1041,48,0	1/1:0,13:13:36.12:781,36,0	0/0:25,0:25:75.21:0,75,2093	0/0:32,0:32:93.32:0,93,2894	0/0:44,0:44:99:0,126,3755	0/0:26,0:26:78.27:0,78,2465	0/0:32,0:32:96.33:0,96,3044	0/0:25,0:25:75.22:0,75,2208	0/0:24,0:24:72.25:0,72,2253	0/0:22,0:22:63.22:0,63,1965	0/0:27,0:27:81.28:0,81,2568	0/0:5,0:5:15.05:0,15,476
chr10	28107847	.	GC	G	1044.53	PASS	AB=0.714;AC=35;AF=0.972;AN=36;BaseQRankSum=1.820;DP=80;FS=7.419;HRun=1;HaplotypeScore=38.4657;InbreedingCoeff=-0.1127;MQ=28.66;MQ0=1;MQRankSum=-0.704;QD=13.93;ReadPosRankSum=2.159;VQSLOD=2.5551;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,2:2:5.93:41,6,0	1/1:1,6:7:14.97:124,15,0	./.	./.	1/1:3,5:8:11.99:104,12,0	1/1:0,1:1:2.99:24,3,0	1/1:0,2:2:5.98:46,6,0	./.	./.	0/1:3,2:5:25.05:53,0,25	1/1:0,6:6:8.98:72,9,0	./.	1/1:0,3:3:8.85:61,9,0	1/1:0,3:3:5.99:48,6,0	1/1:0,1:1:2.99:24,3,0	1/1:0,4:4:11.96:92,12,0	1/1:0,1:1:2.99:23,3,0	./.	./.	1/1:0,7:7:11.97:97,12,0	./.	1/1:1,4:5:11.98:97,12,0	1/1:2,5:8:11.66:85,12,0	./.	1/1:2,5:6:11.97:95,12,0	1/1:1,1:2:2.98:22,3,0	1/1:0,3:3:2.99:23,3,0	./.
chr10	28107972	.	TAAA	T	10108.27	PASS	AC=48;AF=0.889;AN=54;BaseQRankSum=-1.060;DP=377;FS=21.699;HRun=12;HaplotypeScore=61.7180;InbreedingCoeff=0.9420;MQ=53.15;MQ0=2;MQRankSum=-0.342;QD=29.21;ReadPosRankSum=2.044;VQSLOD=2.1403;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,10:12:30.07:379,30,0	1/1:1,3:4:9.01:114,9,0	0/0:9,0:5:12.01:0,12,199	./.	1/1:3,20:23:42.01:509,42,0	1/1:2,18:19:45.13:568,45,0	1/1:3,9:12:24.06:303,24,0	1/1:7,11:17:30.03:366,30,0	1/1:0,5:5:15.05:189,15,0	1/1:2,22:24:63.12:783,63,0	1/1:2,18:19:45.01:559,45,0	1/1:0,17:17:42.13:530,42,0	1/1:0,10:10:24.08:303,24,0	1/1:0,12:12:33.11:417,33,0	1/1:0,11:11:27.07:341,27,0	1/1:1,15:16:39.12:493,39,0	0/0:9,0:10:30.02:0,30,449	0/0:7,0:9:27.05:0,27,461	1/1:3,15:18:41.80:453,42,0	1/1:3,20:22:51.02:604,51,0	1/1:0,5:5:12.04:152,12,0	1/1:1,13:14:33:396,33,0	1/1:2,17:19:42.13:531,42,0	1/1:0,7:7:21.07:265,21,0	1/1:1,19:20:49.72:642,50,0	1/1:0,8:8:24.08:303,24,0	1/1:0,22:22:57.17:720,57,0	1/1:0,5:5:15.05:189,15,0
chr10	28109736	.	C	CA	7838.96	PASS	AC=52;AF=0.963;AN=54;BaseQRankSum=-0.530;DP=225;FS=6.096;HRun=0;HaplotypeScore=187.0016;InbreedingCoeff=0.3755;MQ=39.78;MQ0=1;MQRankSum=-1.631;QD=36.12;ReadPosRankSum=2.141;VQSLOD=3.9364;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,8:11:21.07:299,21,0	1/1:2,6:8:24.02:318,24,0	./.	0/0:4,1:4:3:0,3,26	1/1:2,14:16:36.10:512,36,0	1/1:0,7:7:18.06:266,18,0	1/1:1,3:4:9.03:137,9,0	1/1:3,2:4:9.03:132,9,0	1/1:1,2:3:6.02:82,6,0	1/1:1,9:9:27.09:410,27,0	1/1:2,12:13:30.08:441,30,0	1/1:1,8:8:24.08:359,24,0	1/1:0,6:5:15.05:226,15,0	1/1:0,8:8:24.08:364,24,0	1/1:2,6:7:15.05:224,15,0	1/1:2,3:5:12.04:177,12,0	1/1:2,7:8:20.96:284,21,0	1/1:1,4:5:3.90:134,4,0	1/1:0,1:1:3.01:48,3,0	1/1:0,13:13:39.13:572,39,0	1/1:2,4:6:15.03:196,15,0	1/1:1,12:13:33.11:486,33,0	1/1:1,11:12:36.01:489,36,0	1/1:0,3:3:9.03:134,9,0	1/1:2,8:10:24.06:336,24,0	1/1:1,9:10:27.09:418,27,0	1/1:3,16:18:50.83:703,51,0	1/1:0,2:2:6.02:94,6,0
chr10	28109750	.	G	GT	7911.77	PASS	AC=52;AF=1.000;AN=52;BaseQRankSum=0.504;DP=213;FS=0.000;HRun=1;HaplotypeScore=203.9176;InbreedingCoeff=-0.0210;MQ=34.16;MQ0=0;MQRankSum=0.559;QD=37.32;ReadPosRankSum=1.714;VQSLOD=4.2860;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,9:10:20.98:261,21,0	1/1:0,7:7:21.07:285,21,0	./.	./.	1/1:2,15:17:35.89:549,36,0	1/1:0,8:8:24.08:348,24,0	1/1:0,4:4:12.04:175,12,0	1/1:0,6:4:9.03:133,9,0	1/1:0,5:5:15.05:219,15,0	1/1:0,7:6:18.06:263,18,0	1/1:1,13:13:35.86:484,36,0	1/1:0,7:7:21.07:304,21,0	1/1:1,6:6:18.04:243,18,0	1/1:0,10:10:30.10:434,30,0	1/1:0,6:5:15.05:218,15,0	1/1:1,5:6:18.05:243,18,0	1/1:1,5:5:12.04:176,12,0	1/1:2,3:5:15.01:186,15,0	1/1:0,5:5:15.05:214,15,0	1/1:2,11:13:33.11:464,33,0	1/1:1,3:4:9.03:133,9,0	1/1:0,13:13:39.13:561,39,0	1/1:2,8:10:30.09:408,30,0	1/1:1,2:3:6.02:87,6,0	1/1:0,10:10:30.10:424,30,0	1/1:2,9:11:27.09:379,27,0	1/1:0,16:16:48.16:678,48,0	1/1:0,1:1:3.01:44,3,0
chr10	28109770	.	CA	C	2930.62	PASS	AB=0.500;AC=51;AF=0.944;AN=54;BaseQRankSum=-4.272;DP=268;FS=13.056;HRun=3;HaplotypeScore=361.0143;InbreedingCoeff=0.1811;MQ=41.80;MQ0=0;MQRankSum=-0.866;QD=11.10;ReadPosRankSum=4.593;VQSLOD=0.3029;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,10:11:11.93:118,12,0	1/1:2,5:7:14.17:89,14,0	./.	0/0:4,0:4:1.72:0,2,3	1/1:1,12:13:3.43:47,3,0	1/1:0,10:10:25.41:135,25,0	1/1:0,7:7:20.04:106,20,0	1/1:0,10:4:8.99:95,9,0	1/1:0,7:7:15.50:79,16,0	1/1:0,11:9:26.59:173,27,0	1/1:1,8:9:14.24:116,14,0	1/1:1,14:14:23.18:132,23,0	1/1:0,12:11:26.05:145,26,0	1/1:1,16:17:8.87:104,9,0	1/1:0,11:10:8.29:88,8,0	0/1:0,10:10:10.50:42,0,10	1/1:0,7:6:6.16:48,6,0	1/1:0,6:6:17.53:104,18,0	1/1:0,9:8:20.75:155,21,0	1/1:0,15:15:18.05:126,18,0	1/1:0,2:2:5.91:53,6,0	1/1:0,12:12:22.13:158,22,0	1/1:1,9:10:13.79:121,14,0	1/1:0,4:4:7.69:58,8,0	1/1:0,12:12:29.54:155,30,0	1/1:0,11:11:21.68:171,22,0	1/1:0,24:24:51.26:387,51,0	1/1:0,1:1:2.88:15,3,0
chr10	28109776	.	C	CT	2768.66	PASS	AB=0.619;AC=49;AF=0.875;AN=56;BaseQRankSum=-5.541;DP=274;FS=14.756;HRun=2;HaplotypeScore=363.0298;InbreedingCoeff=0.1650;MQ=44.18;MQ0=0;MQRankSum=-0.664;QD=10.22;ReadPosRankSum=5.730;VQSLOD=0.2683;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,10:10:18.77:121,19,0	1/1:1,4:5:11.68:67,12,0	0/1:3,0:2:0:0,0,0	0/0:3,0:3:2.04:0,2,6	1/1:2,12:14:7.67:76,8,0	1/1:1,10:11:22.14:160,22,0	1/1:0,7:7:20.66:132,21,0	1/1:5,7:4:3:26,3,0	1/1:0,8:8:19.14:128,19,0	1/1:0,11:9:24.40:191,24,0	1/1:2,6:8:11:65,11,0	1/1:0,14:13:15.66:163,16,0	1/1:1,12:12:21.30:148,21,0	1/1:1,16:17:18.26:163,18,0	0/1:1,10:10:2.13:42,0,2	0/1:0,12:12:0:137,0,0	0/1:0,7:6:0.71:44,0,1	1/1:0,6:6:15.37:110,15,0	1/1:2,7:8:15.86:127,16,0	1/1:1,15:16:7.32:162,7,0	1/1:1,1:2:2.97:20,3,0	1/1:2,10:12:22.11:125,22,0	1/1:2,7:9:4.42:48,4,0	0/1:1,3:4:1.12:12,0,1	1/1:2,10:12:12.25:118,12,0	1/1:1,10:11:5.31:132,5,0	1/1:6,19:25:41.67:316,42,0	1/1:0,1:1:2.97:20,3,0
chr10	28109781	.	T	TTA	10383.71	PASS	AB=0.762;AC=52;AF=0.929;AN=56;BaseQRankSum=-1.711;DP=252;FS=3.188;HRun=0;HaplotypeScore=329.6735;InbreedingCoeff=0.1065;MQ=45.38;MQ0=0;MQRankSum=-0.181;QD=41.70;ReadPosRankSum=4.184;VQSLOD=3.7852;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,10:10:1.50:350,2,0	1/1:0,4:4:12.04:228,12,0	0/1:3,0:2:18.80:19,0,39	0/0:3,0:3:2.66:0,3,12	1/1:0,12:12:26.64:367,27,0	1/1:0,10:10:28.91:535,29,0	1/1:0,7:7:21.07:425,21,0	1/1:0,7:1:3.01:61,3,0	1/1:0,8:8:24.02:392,24,0	1/1:1,11:10:26.93:494,27,0	1/1:0,6:6:4.29:284,4,0	1/1:1,14:14:40.38:736,40,0	1/1:0,12:11:26.84:483,27,0	1/1:1,17:18:38.07:866,38,0	0/1:1,10:10:3.29:273,0,3	1/1:0,12:12:20.74:534,21,0	1/1:3,7:9:4.22:263,4,0	1/1:0,6:6:17.27:306,17,0	1/1:0,7:7:17.93:319,18,0	1/1:0,15:15:14.86:609,15,0	1/1:1,1:2:3.01:61,3,0	1/1:0,10:10:15.81:459,16,0	1/1:0,7:7:3.19:225,3,0	1/1:0,3:3:5.61:71,6,0	1/1:0,10:10:26.11:485,26,0	1/1:0,10:10:4.92:406,5,0	1/1:0,19:20:48.30:1072,48,0	1/1:0,1:1:3.01:61,3,0
chr10	28109799	.	C	CA	6081.19	PASS	AC=50;AF=0.926;AN=54;BaseQRankSum=-2.090;DP=207;FS=1.294;HRun=0;HaplotypeScore=307.6364;InbreedingCoeff=0.4075;MQ=48.42;MQ0=0;MQRankSum=-1.940;QD=30.87;ReadPosRankSum=-3.246;VQSLOD=2.5751;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,8:8:14.75:192,15,0	1/1:0,4:4:12.04:187,12,0	0/0:3,0:2:6.02:0,6,83	0/0:3,0:3:2.60:0,3,11	1/1:0,10:10:6.42:123,6,0	1/1:0,8:9:23.76:351,24,0	1/1:0,6:6:14.97:207,15,0	./.	1/1:0,9:9:27.01:361,27,0	1/1:0,10:8:23.71:311,24,0	1/1:0,4:4:5.79:137,6,0	1/1:0,13:12:30.79:440,31,0	1/1:1,11:11:25.76:389,26,0	1/1:0,14:14:32.26:469,32,0	1/1:0,9:9:6.01:173,6,0	1/1:0,11:11:25.72:343,26,0	1/1:0,7:7:3.87:113,4,0	1/1:0,4:4:11.91:156,12,0	1/1:0,5:5:15.02:212,15,0	1/1:0,12:12:16.02:306,16,0	1/1:0,2:2:2.92:17,3,0	1/1:0,7:7:14.80:259,15,0	1/1:0,5:5:3.65:81,4,0	1/1:0,1:1:1.55:4,2,0	1/1:0,9:9:17.62:327,18,0	1/1:0,8:8:0.29:222,0,0	1/1:0,17:17:46.16:650,46,0	1/1:0,1:1:3.01:48,3,0
chr10	28109824	.	GGGT	G	1793.48	PASS	AB=0.500;AC=34;AF=0.739;AN=46;BaseQRankSum=4.276;DP=99;FS=0.000;HRun=0;HaplotypeScore=222.0102;InbreedingCoeff=0.2981;MQ=38.37;MQ0=0;MQRankSum=0.324;QD=21.61;ReadPosRankSum=3.619;VQSLOD=3.0099;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:0,5:5:3.89:0,4,18	1/1:0,1:1:3:29,3,0	1/1:1,0:1:2.50:9,2,0	./.	0/0:0,5:5:2.66:0,3,21	1/1:0,4:4:10.24:124,10,0	./.	./.	1/1:0,5:5:14.48:152,14,0	1/1:0,3:3:8.89:87,9,0	0/0:0,1:1:0.89:0,1,2	1/1:0,8:7:7.87:198,8,0	1/1:0,7:7:0.37:156,0,0	1/1:0,9:9:20.97:213,21,0	0/1:0,7:7:3.07:78,0,3	1/1:0,7:7:16.43:201,16,0	1/1:0,6:6:1.23:117,1,0	1/1:0,2:2:5.89:60,6,0	1/1:0,1:1:2.97:20,3,0	1/1:0,6:6:5.84:68,6,0	./.	0/0:0,1:1:0.89:0,1,2	1/1:0,2:2:0.18:2,0,0	1/1:0,1:1:2.04:6,2,0	0/1:0,3:3:7.87:46,0,8	0/0:0,3:3:3.22:0,3,13	1/1:0,10:10:25.91:342,26,0	./.
chr10	28109830	.	GGCCCC	G	3217.26	PASS	AB=0.500;AC=33;AF=0.750;AN=44;BaseQRankSum=4.275;DP=99;FS=1.669;HRun=0;HaplotypeScore=231.0759;InbreedingCoeff=0.1775;MQ=28.69;MQ0=0;MQRankSum=0.744;QD=35.75;ReadPosRankSum=3.320;VQSLOD=3.7229;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:0,5:5:1.20:0,1,13	1/1:0,1:1:3.01:51,3,0	./.	./.	0/1:0,5:5:7.37:8,0,7	1/1:0,4:4:12.04:213,12,0	./.	./.	1/1:0,5:5:15.05:249,15,0	1/1:0,3:3:9.03:139,9,0	0/0:0,1:1:2.37:0,2,8	1/1:0,8:7:21.05:354,21,0	1/1:0,7:7:18.06:322,18,0	1/1:0,9:9:17.34:387,17,0	1/1:0,7:7:0.91:195,1,0	1/1:0,7:7:11.30:282,11,0	0/1:0,6:6:7.72:154,0,8	1/1:0,2:2:6.02:101,6,0	1/1:0,1:1:3.01:42,3,0	0/1:0,6:6:2.17:145,0,2	./.	0/0:0,1:1:2.50:0,2,9	0/1:0,2:2:4.82:29,0,5	1/1:0,1:1:3.01:37,3,0	1/1:0,3:3:8.98:119,9,0	0/1:0,3:3:3.72:4,0,6	1/1:0,10:10:20.17:504,20,0	./.
chr10	28109843	.	CGT	C	2641.13	PASS	AB=0.500;AC=38;AF=0.792;AN=48;BaseQRankSum=0.035;DP=152;FS=5.384;HRun=0;HaplotypeScore=222.5190;InbreedingCoeff=0.2229;MQ=27.24;MQ0=1;MQRankSum=-2.069;QD=20.32;ReadPosRankSum=3.974;VQSLOD=3.3076;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:1,7:8:3.25:0,3,18	1/1:0,2:2:6.02:74,6,0	./.	./.	1/1:0,7:7:3.78:43,4,0	1/1:0,5:4:0.27:105,0,0	1/1:0,1:1:3.01:42,3,0	1/1:0,2:2:6.02:93,6,0	1/1:0,6:6:12.64:128,13,0	1/1:0,6:5:8.61:117,9,0	1/1:0,5:5:3.97:77,4,0	1/1:0,10:9:22.75:296,23,0	1/1:0,12:12:16.71:309,17,0	1/1:0,9:9:11:206,11,0	1/1:0,11:10:0.55:133,1,0	1/1:0,7:7:13.32:152,13,0	1/1:0,9:9:10.76:227,11,0	1/1:0,4:4:5.27:85,5,0	1/1:0,4:2:3.90:50,4,0	0/1:0,9:9:29.58:93,0,30	./.	0/0:0,2:2:1.55:0,2,4	0/0:0,3:3:3.74:0,4,12	0/0:0,2:2:2.22:0,2,7	0/1:0,3:3:7.92:37,0,8	1/1:0,7:7:0.99:171,1,0	1/1:0,11:10:10.93:320,11,0	./.
chr10	28109847	.	GT	G	2766.53	PASS	AB=0.517;AC=42;AF=0.875;AN=48;BaseQRankSum=0.760;DP=172;FS=6.676;HRun=2;HaplotypeScore=224.4051;InbreedingCoeff=0.3332;MQ=30.10;MQ0=1;MQRankSum=2.772;QD=17.96;ReadPosRankSum=2.525;VQSLOD=3.3326;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:1,8:9:2:0,2,11	1/1:0,2:2:6.02:71,6,0	./.	./.	0/1:1,7:8:2.47:27,0,2	1/1:0,5:4:11.04:103,11,0	1/1:0,1:1:3.01:35,3,0	1/1:0,2:2:6.02:79,6,0	1/1:0,6:6:14.45:123,14,0	1/1:0,8:7:16.80:181,17,0	1/1:0,7:7:0.88:59,1,0	1/1:1,10:10:27.90:280,28,0	1/1:1,12:12:29.07:294,29,0	1/1:2,9:11:23.06:236,23,0	1/1:4,11:13:13.88:199,14,0	1/1:2,7:9:15.42:168,15,0	1/1:0,9:9:21.56:207,22,0	1/1:1,4:5:8.98:93,9,0	1/1:0,4:2:5.95:60,6,0	1/1:0,10:10:8.53:90,9,0	./.	0/0:0,2:2:2.37:0,2,8	0/1:0,3:3:1.74:2,0,3	1/1:0,2:2:2.04:6,2,0	1/1:0,3:3:7.08:49,7,0	1/1:2,7:9:16.39:232,16,0	1/1:0,11:10:28.49:270,28,0	./.
chr10	28110154	.	CGT	C	240.37	PASS	AB=0.899;AC=11;AF=0.212;AN=52;BaseQRankSum=6.744;DP=636;FS=1.533;HRun=0;HaplotypeScore=83.3079;InbreedingCoeff=-0.0761;MQ=57.70;MQ0=19;MQRankSum=-1.002;QD=0.98;ReadPosRankSum=-0.446;VQSLOD=1.6463;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:27.01:0,27,379	1/1:5,0:12:17.01:84,17,0	./.	./.	0/1:22,3:26:36.63:37,0,311	0/0:29,0:29:33.10:0,33,478	0/1:24,1:27:34.96:35,0,210	0/0:32,0:32:21.07:0,21,312	0/1:28,2:32:15.41:15,0,565	0/0:13,0:13:12:0,12,156	0/1:22,5:27:85.11:85,0,399	0/0:21,0:21:24.08:0,24,362	0/0:20,1:21:14.83:0,15,553	0/0:24,1:25:2.80:0,3,414	0/0:33,0:33:48.16:0,48,718	0/0:23,0:23:39.11:0,39,563	0/0:17,0:17:21.54:0,22,318	0/1:19,2:20:54.76:55,0,181	0/0:10,0:7:9.02:0,9,117	0/1:16,4:20:12.21:12,0,247	0/0:39,1:39:11.51:0,12,550	0/1:15,1:17:18.24:18,0,127	0/0:16,0:15:7.87:0,8,216	0/0:21,0:21:24.06:0,24,340	0/0:22,0:21:27.06:0,27,358	0/1:27,2:30:38.54:39,0,406	0/1:30,1:32:4.93:5,0,512	0/0:3,0:5:3:0,3,26
chr10	28110690	.	TTGTGTGTGTG	T	3507.82	PASS	AB=0.976;AC=31;AF=0.775;AN=40;BaseQRankSum=-0.399;DP=380;FS=12.435;HRun=0;HaplotypeScore=112.9440;InbreedingCoeff=0.2637;MQ=59.48;MQ0=18;MQRankSum=-1.874;QD=15.94;ReadPosRankSum=0.682;VQSLOD=1.7813;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	1/1:2,4:7:6.01:176,6,0	./.	0/0:15,0:9:2.04:0,2,6	./.	./.	0/0:11,5:16:3.01:0,3,100	0/1:17,0:16:15.95:31,0,16	1/1:4,2:6:3.47:172,3,0	1/1:2,7:8:18.06:476,18,0	1/1:8,5:13:0.47:1,0,0	1/1:0,6:6:3.01:86,3,0	1/1:3,4:7:2.58:86,3,0	./.	1/1:7,9:15:6.02:172,6,0	0/1:12,0:13:11.96:101,0,12	0/0:27,0:27:26.99:0,27,455	0/1:14,0:12:3.29:3,0,93	1/1:13,6:20:24.07:598,24,0	1/1:10,9:19:6.02:161,6,0	./.	./.	./.	1/1:6,0:5:3.01:89,3,0	1/1:7,9:13:3.01:73,3,0	1/1:11,6:17:21.07:557,21,0	1/1:8,7:18:20.62:551,21,0	1/1:6,3:10:6.02:175,6,0
chr10	28110723	.	TGTGTGTGTGTGA	T	3503.97	PASS	AB=0.981;AC=23;AF=0.426;AN=54;BaseQRankSum=2.865;DP=430;FS=58.812;HRun=0;HaplotypeScore=138.1532;InbreedingCoeff=-0.3365;MQ=42.78;MQ0=29;MQRankSum=-1.174;QD=11.53;ReadPosRankSum=5.604;VQSLOD=-0.1331;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:17.89:0,18,163	0/1:7,0:7:11.33:121,0,11	./.	0/0:1,0:1:2.04:0,2,6	0/0:13,14:26:9.47:0,9,93	0/1:16,0:15:16:16,0,32	0/1:17,0:16:48.48:48,0,152	0/1:16,0:14:40.44:40,0,55	1/1:11,0:11:4.50:185,4,0	0/1:18,0:15:5.99:475,0,6	1/1:17,0:16:2.48:21,2,0	0/1:12,0:12:13.31:78,0,13	0/1:14,0:12:11.66:80,0,12	0/0:14,0:13:6.01:0,6,71	0/1:17,0:16:33.84:132,0,34	0/1:8,7:15:38.62:132,0,39	0/0:24,0:23:6.37:0,6,690	0/1:11,0:9:1.51:2,0,203	0/1:15,0:13:21.45:546,0,21	0/1:23,0:23:94:155,0,94	0/1:10,0:5:12.56:13,0,37	0/0:16,0:12:15.90:0,16,137	0/0:18,0:18:13.88:0,14,122	0/1:10,0:9:18.94:83,0,19	0/1:23,0:20:10.89:11,0,75	0/1:15,0:14:68.97:578,0,69	0/1:24,0:21:48.67:608,0,49	1/1:13,0:8:8.24:182,8,0
chr10	28110733	.	TGAGAGA	T	90.38	PASS	AB=0.994;AC=10;AF=0.179;AN=56;BaseQRankSum=2.996;DP=452;FS=0.000;HRun=0;HaplotypeScore=125.5009;InbreedingCoeff=-0.1421;MQ=43.63;MQ0=28;MQRankSum=0.347;QD=0.64;ReadPosRankSum=0.276;VQSLOD=1.8621;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:18.06:0,18,424	0/0:7,0:7:5.73:0,6,70	0/0:1,0:1:3.01:0,3,66	0/0:2,0:1:2.98:0,3,22	0/0:28,0:27:12.04:0,12,297	0/1:18,0:17:42.88:43,0,256	0/0:20,0:19:5.43:0,5,427	0/1:18,1:17:51.40:51,0,374	1/1:9,3:12:2.61:53,3,0	0/0:17,0:14:0.10:0,0,248	0/1:18,0:17:11.60:12,0,134	0/0:14,0:14:4.26:0,4,71	0/1:17,0:15:11.87:12,0,63	0/0:14,0:13:6.02:0,6,132	0/0:17,0:16:4.48:0,4,70	0/1:13,0:13:4.72:5,0,124	0/0:22,0:21:35.94:0,36,567	0/1:9,0:7:11.49:11,0,117	0/0:17,0:14:13.07:0,13,218	0/0:25,0:25:9.47:0,9,541	0/1:11,0:7:11.11:11,0,133	0/0:19,0:15:18.06:0,18,441	0/0:18,0:18:12.04:0,12,277	0/0:13,0:12:5.97:0,6,149	0/0:24,0:21:18.06:0,18,405	0/0:17,0:16:31.95:0,32,514	0/1:25,0:22:22.59:23,0,344	0/0:11,0:6:5.61:0,6,53
chr10	28111138	.	AC	A	3776.28	PASS	AB=0.965;AC=52;AF=0.929;AN=56;BaseQRankSum=8.379;DP=715;FS=2.476;HRun=1;HaplotypeScore=222.7611;InbreedingCoeff=-0.0971;MQ=86.01;MQ0=0;MQRankSum=7.568;QD=5.28;ReadPosRankSum=5.644;VQSLOD=0.6434;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:36,0:36:28.54:143,29,0	1/1:5,0:5:4.61:21,5,0	0/1:22,2:24:28.60:29,0,358	0/1:27,2:29:25.60:26,0,471	1/1:26,0:26:8.53:107,9,0	1/1:31,0:31:20.73:139,21,0	1/1:28,0:27:35.53:164,36,0	1/1:35,0:35:36.16:270,36,0	1/1:30,0:30:25.03:132,25,0	1/1:34,1:35:51.31:313,51,0	1/1:27,0:27:54.16:196,54,0	1/1:36,0:36:28:193,28,0	1/1:36,0:36:17.54:174,18,0	1/1:23,0:23:2.42:63,2,0	1/1:30,0:30:15.13:153,15,0	1/1:26,0:26:28.89:164,29,0	0/1:19,0:19:12.55:51,0,13	1/1:13,0:13:0.65:29,1,0	1/1:24,0:24:24.44:163,24,0	0/1:24,0:24:6.04:75,0,6	1/1:41,0:41:79.60:271,80,0	1/1:24,0:24:47.06:155,47,0	1/1:16,0:16:33.04:122,33,0	1/1:18,0:18:21.33:112,21,0	1/1:19,0:19:9.99:71,10,0	1/1:25,0:25:51.82:218,52,0	1/1:28,0:28:50.15:159,50,0	1/1:7,0:7:14.74:64,15,0
chr10	28120723	.	GAGAGAGAGAGAGAA	G	1833.76	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=-2.450;DP=564;FS=4.885;HRun=0;HaplotypeScore=168.0032;InbreedingCoeff=-0.3527;MQ=55.07;MQ0=17;MQRankSum=1.283;QD=4.37;ReadPosRankSum=-3.165;VQSLOD=1.7933;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:19,0:19:46.63:47,0,130	0/1:15,0:15:78.81:79,0,241	0/0:21,0:3:3.01:0,3,92	0/1:56,0:15:20.79:21,0,62	0/1:21,0:20:19.37:19,0,462	0/0:26,0:26:2.87:0,3,15	0/1:16,0:16:49.13:49,0,249	0/1:17,0:17:99:147,0,115	0/0:16,0:16:2.87:0,3,15	1/1:6,19:25:56.85:635,57,0	1/1:14,0:14:23.86:234,24,0	0/1:19,0:19:26.93:27,0,197	0/1:24,0:23:6.06:78,0,6	0/1:24,0:24:99:100,0,351	0/1:25,0:25:9.04:57,0,9	0/1:21,0:21:27.63:132,0,28	0/0:22,0:20:46.97:0,47,1611	0/0:8,0:7:18.06:0,18,796	0/1:10,0:9:26.61:27,0,198	0/0:27,0:27:2.88:0,3,15	0/1:20,0:20:66.40:66,0,247	0/1:19,0:19:72.97:73,0,116	1/1:20,0:20:6.01:126,6,0	0/1:10,0:9:17.95:18,0,31	0/0:21,0:21:2.88:0,3,15	0/1:22,0:22:33.87:34,0,815	0/1:22,0:21:25.86:26,0,579	0/0:3,0:2:5.93:0,6,115
chr10	28120725	.	GAGAGAGAGAGAA	G	2920.04	PASS	AB=0.995;AC=37;AF=0.661;AN=56;BaseQRankSum=-1.013;DP=559;FS=1.062;HRun=0;HaplotypeScore=148.3366;InbreedingCoeff=-0.1780;MQ=54.90;MQ0=18;MQRankSum=-1.013;QD=5.77;ReadPosRankSum=-1.493;VQSLOD=2.6306;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:19,0:19:52.25:114,0,52	0/1:15,0:15:70.39:130,0,70	0/0:24,0:6:8.20:0,8,101	0/1:55,0:14:18.14:18,0,38	0/1:20,0:19:43.75:44,0,235	1/1:29,0:28:2.68:11,3,0	0/1:15,0:15:75.21:75,0,178	0/1:14,0:15:76.96:160,0,77	1/1:16,0:16:2.68:11,3,0	1/1:24,0:24:56.85:588,57,0	1/1:15,0:15:23.93:202,24,0	0/1:18,0:18:78.57:90,0,79	1/1:23,1:23:8.70:169,9,0	0/1:24,0:24:99:215,0,118	1/1:25,1:26:5.69:119,6,0	1/1:19,2:21:17.07:298,17,0	0/0:21,0:19:46.91:0,47,1391	0/0:8,0:7:18.05:0,18,639	0/1:10,0:9:49.37:49,0,68	1/1:25,0:25:2.68:11,3,0	0/1:20,0:20:99:118,0,103	1/1:19,0:19:4.47:154,4,0	1/1:4,14:18:6.02:215,6,0	1/1:9,0:8:1.21:21,1,0	1/1:20,0:20:2.68:11,3,0	0/1:22,0:22:99:143,0,413	0/1:22,0:21:97.37:97,0,340	0/1:3,0:2:18.94:19,0,66
chr10	28120727	.	GAGAGAGAGAA	G	4528.51	PASS	AB=0.978;AC=42;AF=0.750;AN=56;BaseQRankSum=-1.558;DP=574;FS=1.210;HRun=0;HaplotypeScore=134.8227;InbreedingCoeff=0.1041;MQ=55.69;MQ0=18;MQRankSum=0.941;QD=8.73;ReadPosRankSum=-2.825;VQSLOD=3.1875;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:16,1:17:6.91:138,0,7	1/1:15,0:15:31.77:264,32,0	0/0:26,0:6:10.25:0,10,88	0/1:60,0:16:25.21:25,0,35	0/1:21,0:20:33.18:148,0,33	1/1:29,0:28:3.01:37,3,0	0/1:15,1:16:94.70:145,0,95	0/1:15,0:15:50.91:192,0,51	1/1:16,0:16:3.01:37,3,0	1/1:24,0:24:56.85:560,57,0	1/1:16,0:16:26.50:219,26,0	1/1:18,2:20:7.70:283,8,0	1/1:24,1:24:9.03:207,9,0	1/1:25,1:26:21.11:514,21,0	1/1:25,0:25:6.02:112,6,0	1/1:20,1:21:18.06:356,18,0	0/0:21,0:19:44.67:0,45,1177	0/0:8,0:7:17.08:0,17,514	1/1:11,0:10:8.22:135,8,0	1/1:26,0:26:3.01:37,3,0	1/1:20,0:20:25.05:205,25,0	1/1:19,0:19:26.79:222,27,0	1/1:17,0:17:6.02:150,6,0	1/1:9,0:8:5.92:41,6,0	1/1:22,0:22:3.01:37,3,0	0/1:23,0:23:82.16:252,0,82	0/1:21,1:21:99:192,0,116	0/1:3,0:2:18.94:19,0,39
chr10	28120729	.	GAGAGAGAA	G	5806.81	PASS	AB=0.988;AC=47;AF=0.839;AN=56;BaseQRankSum=-0.809;DP=575;FS=1.425;HRun=0;HaplotypeScore=117.8886;InbreedingCoeff=0.2214;MQ=54.36;MQ0=20;MQRankSum=1.639;QD=11.02;ReadPosRankSum=-1.857;VQSLOD=3.2193;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:18:14.76:199,15,0	1/1:14,0:14:35.85:285,36,0	0/0:27,0:6:10.34:0,10,53	0/1:63,0:14:25.50:25,0,35	1/1:21,1:21:22.51:276,23,0	1/1:4,26:29:3.01:81,3,0	0/1:15,1:16:46.85:184,0,47	0/1:16,0:16:27.85:231,0,28	1/1:3,13:16:3.01:81,3,0	1/1:23,0:23:56.85:532,57,0	1/1:15,0:15:26.71:219,27,0	1/1:17,2:19:26.26:335,26,0	1/1:3,21:23:9.03:205,9,0	1/1:24,2:26:59.81:648,60,0	1/1:3,22:25:6.02:143,6,0	1/1:3,18:21:18.06:428,18,0	0/0:21,0:19:46.80:0,47,992	0/1:8,0:7:6.95:7,0,386	1/1:12,0:11:29.11:248,29,0	1/1:1,24:25:3.01:81,3,0	1/1:20,0:20:32.95:292,33,0	1/1:16,0:16:26.79:222,27,0	1/1:17,0:17:6.02:122,6,0	1/1:9,0:8:5.92:41,6,0	1/1:1,20:21:3.01:81,3,0	1/1:24,0:24:53:469,53,0	1/1:21,2:22:30.44:352,30,0	0/1:4,0:2:11.90:19,0,12
chr10	28120735	.	GAA	G	5428.34	PASS	AB=1.000;AC=49;AF=0.875;AN=56;BaseQRankSum=-0.283;DP=590;FS=3.505;HRun=3;HaplotypeScore=88.1651;InbreedingCoeff=0.3100;MQ=57.62;MQ0=20;MQRankSum=1.444;QD=10.18;ReadPosRankSum=-1.410;VQSLOD=1.2125;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:19:16.97:201,17,0	1/1:15,0:15:38.86:310,39,0	0/0:35,0:7:7.07:0,7,46	0/1:66,0:16:28.83:29,0,33	1/1:23,0:22:47.70:388,48,0	1/1:27,0:26:2.98:21,3,0	0/1:16,0:16:5.39:163,0,5	1/1:11,10:21:56.10:432,56,0	1/1:14,0:14:2.98:21,3,0	1/1:20,0:20:56.71:449,57,0	1/1:16,0:16:32.93:269,33,0	1/1:18,0:18:25.64:232,26,0	1/1:24,0:23:8.90:61,9,0	1/1:24,0:24:62.70:507,63,0	1/1:24,0:24:5.93:41,6,0	1/1:21,0:21:17.81:123,18,0	0/0:22,0:20:26.04:0,26,460	0/1:8,0:7:24.12:24,0,145	1/1:16,0:16:43.60:329,44,0	1/1:24,0:24:2.98:21,3,0	1/1:23,0:23:35.83:290,36,0	1/1:16,0:16:29.79:247,30,0	1/1:14,0:14:5.91:39,6,0	1/1:9,0:8:5.92:41,6,0	1/1:20,0:20:2.98:21,3,0	1/1:27,0:27:80.68:671,81,0	1/1:23,0:22:53.57:423,54,0	1/1:5,0:3:8.99:75,9,0
chr10	28121794	.	TTCCCAC	T	24033.17	PASS	AB=0.800;AC=45;AF=0.833;AN=54;BaseQRankSum=5.853;DP=437;FS=3.335;HRun=0;HaplotypeScore=143.8310;InbreedingCoeff=0.9248;MQ=69.78;MQ0=0;MQRankSum=-11.428;QD=62.59;ReadPosRankSum=3.116;VQSLOD=5.5114;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,7:11:24.08:533,24,0	1/1:0,10:10:30.10:734,30,0	0/0:15,0:16:48.16:0,48,1500	0/0:11,0:11:33.02:0,33,902	1/1:1,22:23:54.19:1291,54,0	1/1:0,13:13:36.12:881,36,0	1/1:0,16:16:42.14:1021,42,0	1/1:8,22:30:78.24:1754,78,0	1/1:3,10:13:30.10:728,30,0	1/1:1,21:22:63.22:1522,63,0	1/1:3,16:19:48.16:1164,48,0	1/1:0,10:10:30.10:734,30,0	1/1:2,17:19:51.18:1248,51,0	1/1:2,12:14:42.13:961,42,0	1/1:0,16:16:42.14:1029,42,0	1/1:0,7:7:21.07:514,21,0	0/0:20,0:20:60.19:0,60,2055	0/0:6,0:6:18.06:0,18,659	1/1:2,9:11:30.10:736,30,0	1/1:3,30:33:93.32:2227,93,0	1/1:3,2:5:6.02:147,6,0	1/1:5,19:24:60.21:1465,60,0	1/1:6,19:25:60.21:1460,60,0	0/1:3,1:4:0:0,0,0	1/1:0,20:20:57.20:1396,57,0	1/1:1,17:18:51.18:1243,51,0	1/1:3,18:21:51.18:1243,51,0	./.
chr10	28121803	.	T	TA	8918.73	PASS	AB=0.580;AC=43;AF=0.796;AN=54;BaseQRankSum=4.572;DP=455;FS=3.241;HRun=10;HaplotypeScore=167.3042;InbreedingCoeff=0.6509;MQ=67.38;MQ0=0;MQRankSum=-6.122;QD=21.97;ReadPosRankSum=0.664;VQSLOD=3.2909;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:2,8:10:0.56:185,0,1	1/1:2,8:10:24.06:252,24,0	0/0:12,0:13:25.96:0,26,200	0/0:10,0:11:13.01:0,13,70	1/1:6,16:22:23.87:444,24,0	1/1:8,10:19:38.04:430,38,0	1/1:6,10:16:39.06:389,39,0	1/1:11,19:30:23.11:648,23,0	1/1:5,6:12:20:232,20,0	0/1:8,15:23:16.31:450,0,16	1/1:4,14:19:21.43:383,21,0	1/1:3,9:12:30.07:315,30,0	1/1:6,14:20:42.10:437,42,0	1/1:6,11:17:30.07:314,30,0	1/1:5,11:16:36.09:379,36,0	1/1:3,5:8:15.04:158,15,0	0/0:19,0:19:53.90:0,54,437	0/0:5,0:6:17.02:0,17,129	1/1:7,7:14:32.88:320,33,0	1/1:5,29:35:65.36:865,65,0	1/1:3,2:5:11.99:114,12,0	1/1:3,18:21:35.86:559,36,0	1/1:3,18:21:54.09:552,54,0	1/1:4,1:5:8.82:95,9,0	0/1:6,16:22:9.15:506,0,9	1/1:10,11:21:14.78:355,15,0	1/1:6,22:28:3.79:538,4,0	./.
chr10	28123363	.	T	TG	19961.61	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-0.161;DP=558;FS=0.000;HRun=1;HaplotypeScore=414.7665;InbreedingCoeff=0.6905;MQ=34.39;MQ0=0;MQRankSum=-2.444;QD=35.97;ReadPosRankSum=1.274;VQSLOD=2.4882;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,12:12:30.10:449,30,0	1/1:1,4:5:15.05:219,15,0	0/0:2,0:2:3:0,3,26	0/0:1,0:1:3:0,3,26	1/1:2,30:32:71.73:1035,72,0	1/1:8,29:37:90.22:1294,90,0	1/1:2,14:16:35.99:463,36,0	1/1:8,23:30:90.23:1279,90,0	1/1:2,20:22:60.16:870,60,0	1/1:3,29:32:93.31:1391,93,0	1/1:6,27:33:81.19:1156,81,0	1/1:0,17:17:51.17:762,51,0	1/1:3,27:30:78.06:1042,78,0	1/1:2,19:21:51.09:712,51,0	1/1:5,26:31:81.02:1061,81,0	1/1:1,20:21:63.08:867,63,0	1/1:0,13:13:36.12:538,36,0	1/1:4,10:14:30.10:442,30,0	1/1:2,18:19:54.18:808,54,0	1/1:1,30:30:63.21:940,63,0	1/1:1,14:15:18.06:269,18,0	1/1:4,20:24:51.17:762,51,0	1/1:3,19:22:54.14:781,54,0	1/1:2,8:10:14.80:224,15,0	1/1:2,19:21:54.18:807,54,0	1/1:1,25:26:72.24:1077,72,0	1/1:1,17:18:48.08:668,48,0	1/1:0,1:1:3.01:45,3,0
chr10	28123375	.	G	GA	22168.65	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-0.344;DP=567;FS=0.000;HRun=1;HaplotypeScore=407.3551;InbreedingCoeff=0.6947;MQ=32.90;MQ0=0;MQRankSum=-2.445;QD=39.24;ReadPosRankSum=0.401;VQSLOD=2.5354;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,13:16:33.07:457,33,0	1/1:0,5:5:15.05:224,15,0	0/0:1,0:1:3:0,3,25	0/0:1,0:1:2.84:0,3,14	1/1:4,28:32:81.18:1128,81,0	1/1:2,35:37:99:1557,105,0	1/1:5,15:20:48.12:674,48,0	1/1:5,22:24:69.19:995,69,0	1/1:1,21:22:66.22:976,66,0	1/1:4,26:30:90.26:1310,90,0	1/1:5,24:29:75.20:1045,75,0	1/1:5,15:20:54.15:781,54,0	1/1:3,26:29:81.27:1196,81,0	1/1:2,17:19:54.14:782,54,0	1/1:4,22:26:69.23:1011,69,0	1/1:2,21:23:66.18:954,66,0	1/1:7,8:15:38.83:466,39,0	1/1:0,8:8:24.08:359,24,0	1/1:3,17:19:54.18:791,54,0	1/1:1,37:37:99:1574,108,0	1/1:1,12:13:39.13:561,39,0	1/1:4,24:28:78.12:1061,78,0	1/1:2,24:26:72.20:1020,72,0	1/1:0,10:10:20.82:313,21,0	1/1:3,18:21:60.12:841,60,0	1/1:5,25:30:81.20:1151,81,0	1/1:0,20:20:60.20:897,60,0	1/1:0,1:1:3.01:45,3,0
chr10	28124295	.	A	AT	15596.68	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-6.656;DP=576;FS=14.532;HRun=8;HaplotypeScore=51.4708;InbreedingCoeff=0.9842;MQ=78.26;MQ0=0;MQRankSum=-6.052;QD=28.46;ReadPosRankSum=3.657;VQSLOD=3.9521;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,13:15:30.05:331,30,0	1/1:0,12:12:33.10:381,33,0	0/0:21,0:21:31.21:0,31,338	0/0:7,0:7:12.77:0,13,126	1/1:1,26:27:72.01:781,72,0	1/1:3,23:26:66.20:762,66,0	1/1:2,10:12:27.08:312,27,0	1/1:6,22:28:66.15:730,66,0	1/1:5,12:17:32.68:355,33,0	1/1:4,33:37:99:1133,99,0	1/1:3,15:18:39.07:434,39,0	1/1:1,19:20:54.16:623,54,0	1/1:4,21:25:51.15:589,51,0	1/1:0,13:13:33.10:381,33,0	1/1:0,20:20:60.18:692,60,0	1/1:3,21:24:35.90:665,36,0	1/1:2,10:12:30.09:346,30,0	1/1:1,11:11:33.10:381,33,0	1/1:1,20:21:60.18:691,60,0	1/1:2,32:34:93.24:1059,93,0	1/1:3,18:21:39.12:450,39,0	1/1:3,17:20:51.07:568,51,0	1/1:0,19:19:48.14:554,48,0	1/1:2,19:21:51.15:589,51,0	1/1:0,24:24:60.18:692,60,0	1/1:0,23:23:69.18:783,69,0	1/1:4,29:33:81.24:933,81,0	1/1:3,11:14:33.10:381,33,0
chr10	28125830	.	A	AG	16627.71	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=11.040;DP=614;FS=4.775;HRun=5;HaplotypeScore=168.4145;InbreedingCoeff=0.9891;MQ=80.09;MQ0=0;MQRankSum=-7.956;QD=30.91;ReadPosRankSum=1.762;VQSLOD=2.5784;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,38:41:99:1514,120,0	1/1:2,4:6:12.04:156,12,0	0/0:21,0:21:42.03:0,42,415	0/0:18,0:18:40.62:0,41,447	1/1:3,20:23:60.15:758,60,0	1/1:1,28:29:75.24:971,75,0	1/1:0,17:17:48.16:624,48,0	1/1:9,32:41:99:1235,102,0	1/1:2,19:21:48.16:623,48,0	1/1:4,21:25:66.17:832,66,0	1/1:4,8:12:27.09:344,27,0	1/1:3,17:20:48.16:622,48,0	1/1:3,22:25:60.19:776,60,0	1/1:3,18:21:48.16:624,48,0	1/1:3,23:26:66.21:860,66,0	1/1:3,27:30:72.23:939,72,0	0/0:26,0:26:72.18:0,72,773	0/0:11,0:11:23.99:0,24,257	1/1:5,15:20:48.12:607,48,0	1/1:1,10:11:24.08:311,24,0	1/1:3,22:25:48.15:621,48,0	1/1:3,14:17:42.13:532,42,0	1/1:7,16:23:22.31:608,22,0	1/1:3,22:25:60.13:760,60,0	1/1:5,20:25:54.18:701,54,0	1/1:7,16:23:51.13:635,51,0	1/1:4,13:17:39.13:507,39,0	1/1:1,14:15:36.12:466,36,0
chr10	28126106	.	TTCC	T	2112.38	PASS	AB=0.974;AC=33;AF=0.635;AN=52;BaseQRankSum=-2.060;DP=326;FS=0.000;HRun=0;HaplotypeScore=69.1763;InbreedingCoeff=-0.1316;MQ=37.37;MQ0=36;MQRankSum=-2.113;QD=7.21;ReadPosRankSum=-2.224;VQSLOD=1.8975;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:12,2:13:19.61:183,20,0	1/1:6,0:5:8.79:53,9,0	./.	./.	0/1:18,0:17:63.91:88,0,64	0/1:26,0:25:31.84:163,0,32	1/1:10,0:7:13.08:80,13,0	1/1:24,0:8:11.83:79,12,0	1/1:6,0:6:3.31:15,3,0	0/1:11,0:10:35.30:115,0,35	0/1:11,1:12:2.83:103,0,3	0/1:10,0:8:24.31:36,0,24	0/1:15,0:10:34.37:115,0,34	0/1:6,2:5:13.65:44,0,14	0/1:12,0:11:29.26:102,0,29	1/1:12,0:11:7.21:137,7,0	0/0:16,0:14:28.99:0,29,265	0/0:8,0:8:14.97:0,15,205	0/1:11,0:5:17.08:30,0,17	0/1:18,0:18:4.91:139,0,5	1/1:2,2:3:6.47:51,6,0	1/1:17,0:17:36.05:251,36,0	1/1:13,2:14:3.09:147,3,0	1/1:11,0:6:5.96:45,6,0	0/1:13,1:14:32.60:166,0,33	0/1:14,0:14:20.34:100,0,20	0/1:5,0:4:33.03:34,0,33	0/0:8,0:6:12:0,12,112
chr10	28126151	.	CT	C	1389.24	PASS	AB=0.651;AC=37;AF=0.661;AN=56;BaseQRankSum=2.698;DP=286;FS=0.963;HRun=2;HaplotypeScore=41.5056;InbreedingCoeff=0.2864;MQ=23.78;MQ0=43;MQRankSum=-1.758;QD=8.79;ReadPosRankSum=-0.321;VQSLOD=0.8883;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,5:5:3.01:35,3,0	1/1:0,1:1:3.01:35,3,0	0/0:39,0:5:15.01:0,15,196	0/0:61,0:8:14.86:0,15,207	0/1:2,5:7:0:0,0,0	0/1:5,5:9:22.88:65,0,23	1/1:3,7:7:15.01:175,15,0	1/1:12,6:12:13.29:165,13,0	1/1:1,7:7:2.97:20,3,0	1/1:1,4:3:9.03:116,9,0	1/1:0,9:9:1.72:4,2,0	1/1:0,5:5:3.01:39,3,0	0/1:4,1:4:29.67:68,0,30	1/1:1,5:4:9.03:116,9,0	1/1:1,4:5:9.03:115,9,0	1/1:1,3:3:2.97:20,3,0	0/0:9,0:8:7.20:0,7,214	0/0:6,0:6:10.23:0,10,112	1/1:1,4:5:11.25:123,11,0	1/1:3,8:11:3.01:39,3,0	0/0:3,0:2:0:0,0,0	1/1:2,4:5:8.85:56,9,0	1/1:3,4:5:2.97:20,3,0	0/0:5,1:2:0:0,0,0	1/1:1,7:8:2.71:20,3,0	0/1:6,8:11:20.28:245,0,20	0/1:2,2:3:16.18:69,0,16	0/0:4,0:3:2.40:0,2,41
chr10	28128613	.	T	TC	18985.55	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-7.743;DP=540;FS=67.706;HRun=1;HaplotypeScore=55.0277;InbreedingCoeff=0.9939;MQ=80.02;MQ0=0;MQRankSum=-4.446;QD=39.89;ReadPosRankSum=3.556;VQSLOD=-0.7530;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,30:32:78.26:1168,78,0	1/1:0,8:8:21.07:312,21,0	0/0:13,0:13:36.06:0,36,433	0/0:21,0:21:46.32:0,46,639	1/1:0,18:18:51.12:738,51,0	1/1:0,24:24:63.08:888,63,0	1/1:1,32:33:81.27:1198,81,0	1/1:1,37:38:99:1555,108,0	1/1:0,21:21:57.19:853,57,0	1/1:0,22:22:66.18:934,66,0	1/1:0,12:12:36.12:539,36,0	1/1:0,16:17:45.15:667,45,0	1/1:2,22:24:66.17:960,66,0	1/1:0,24:24:69.19:1004,69,0	1/1:0,20:20:48.16:719,48,0	1/1:0,20:20:57.19:853,57,0	0/0:15,0:15:45.05:0,45,544	0/0:15,0:15:36.12:0,36,466	1/1:1,13:14:39.07:537,39,0	1/1:0,14:14:36.12:539,36,0	1/1:2,33:35:99:1460,99,0	1/1:0,7:7:18.06:269,18,0	1/1:0,6:6:18.06:270,18,0	1/1:1,21:22:60.20:898,60,0	1/1:0,19:19:48.11:693,48,0	1/1:0,19:19:57.19:853,57,0	1/1:1,17:18:45.15:674,45,0	1/1:0,9:9:27.09:404,27,0
chr10	28129335	.	C	CT	1042.68	PASS	AB=0.853;AC=19;AF=0.339;AN=56;BaseQRankSum=4.710;DP=395;FS=9.670;HRun=1;HaplotypeScore=85.8586;InbreedingCoeff=-0.1870;MQ=34.61;MQ0=66;MQRankSum=-3.021;QD=5.58;ReadPosRankSum=3.198;VQSLOD=0.0816;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:8,1:8:0.12:0,0,20	1/1:6,3:4:6.02:82,6,0	0/0:33,0:3:6.02:0,6,77	0/0:46,0:10:20.96:0,21,252	0/0:13,0:9:2.82:0,3,19	0/1:14,2:14:17.71:18,0,141	0/1:13,0:9:20.88:21,0,92	0/0:26,0:18:5.97:0,6,429	0/1:10,3:12:80.40:87,0,80	0/1:14,4:15:99:209,0,213	0/0:9,3:12:2.43:0,2,5	0/1:4,1:4:24.33:24,0,53	0/1:5,1:4:29.23:29,0,37	1/1:7,2:5:6.02:84,6,0	0/1:9,2:10:35.97:69,0,36	0/1:11,4:12:11.47:186,0,11	0/0:8,0:7:18.06:0,18,252	0/0:9,0:8:24.05:0,24,306	0/1:6,1:5:27.12:27,0,153	0/1:10,3:11:27.55:28,0,77	1/1:11,0:4:2.96:19,3,0	0/0:12,1:11:6.48:0,6,85	0/0:11,3:12:4.25:0,4,42	0/0:5,0:2:2.88:0,3,15	0/0:13,3:14:6.12:0,6,50	0/1:10,2:8:98.65:99,0,163	0/1:15,5:16:99:214,0,124	0/0:11,0:3:5.97:0,6,57
chr10	28129337	.	C	CTAT	1813.85	PASS	AB=0.988;AC=22;AF=0.393;AN=56;BaseQRankSum=3.914;DP=410;FS=21.690;HRun=0;HaplotypeScore=95.9758;InbreedingCoeff=-0.1384;MQ=34.88;MQ0=66;MQRankSum=-3.265;QD=8.03;ReadPosRankSum=2.868;VQSLOD=1.4439;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:8:7.46:0,7,28	1/1:9,0:4:6.02:99,6,0	0/0:33,0:3:6.02:0,6,112	0/0:50,0:11:20.73:0,21,302	1/1:13,0:9:3:28,3,0	0/1:16,0:14:28.07:28,0,155	0/1:15,0:11:37.02:37,0,98	0/1:31,0:23:99:162,0,479	0/1:13,0:12:85.48:130,0,85	0/1:16,1:14:99:316,0,272	0/0:12,0:12:0.89:0,1,2	0/1:6,0:5:34.67:35,0,66	0/1:5,0:4:39.26:50,0,39	1/1:10,0:6:6.02:102,6,0	0/1:11,0:10:35.49:101,0,35	1/1:14,1:12:4.10:275,4,0	0/0:9,0:8:24.04:0,24,383	0/0:9,0:8:24.08:0,24,446	0/1:8,0:6:71.85:72,0,201	0/1:12,0:11:39.12:39,0,126	1/1:10,0:4:3:28,3,0	0/0:11,2:11:6.48:0,6,108	0/0:15,0:13:4.25:0,4,35	0/0:6,0:3:2.92:0,3,17	0/0:15,1:14:2.99:0,3,54	0/1:13,0:9:99:137,0,173	0/1:19,2:18:99:334,0,126	0/0:11,0:3:3.01:0,3,33
chr10	28129338	.	C	CTA	1127.38	PASS	AB=0.873;AC=26;AF=0.481;AN=54;BaseQRankSum=6.324;DP=414;FS=23.191;HRun=0;HaplotypeScore=96.8430;InbreedingCoeff=-0.0394;MQ=35.18;MQ0=66;MQRankSum=-3.848;QD=4.53;ReadPosRankSum=2.824;VQSLOD=0.9764;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:9,1:8:5.11:0,5,26	1/1:6,3:4:6.02:70,6,0	0/0:34,0:3:6.02:0,6,91	0/0:52,0:12:17.16:0,17,229	1/1:13,0:9:3:25,3,0	0/1:15,2:15:11.98:32,0,12	0/1:15,0:11:21:21,0,36	0/1:30,0:23:73.22:73,0,176	0/1:11,2:12:19.57:93,0,20	0/1:13,4:14:75.85:217,0,76	0/1:8,3:11:0:0,0,0	0/1:5,1:5:18.95:23,0,19	0/1:4,1:4:11.98:24,0,12	1/1:9,2:7:5.97:76,6,0	1/1:9,2:10:8.91:75,9,0	1/1:13,3:13:20.78:161,21,0	0/0:10,0:9:24.08:0,24,352	0/0:9,0:8:24.08:0,24,362	0/1:7,1:6:57.35:57,0,82	0/1:8,3:10:13.72:35,0,14	1/1:10,0:4:2.99:25,3,0	0/0:13,1:12:5.90:0,6,38	0/0:12,3:13:2.36:0,2,8	./.	0/0:12,3:13:2.98:0,3,22	0/1:12,1:9:47.48:74,0,47	0/1:18,5:19:41.14:201,0,41	1/1:10,0:2:1.25:3,1,0
chr10	28129343	.	T	TC	2053.10	PASS	AB=0.877;AC=26;AF=0.481;AN=54;BaseQRankSum=3.158;DP=436;FS=20.328;HRun=1;HaplotypeScore=92.0594;InbreedingCoeff=-0.0776;MQ=40.40;MQ0=60;MQRankSum=-2.270;QD=7.84;ReadPosRankSum=2.183;VQSLOD=-0.3766;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:9,2:9:4.35:0,4,17	1/1:8,3:6:6.02:82,6,0	0/0:40,0:5:9.03:0,9,114	0/0:54,0:15:25.86:0,26,257	1/1:14,0:10:3.01:45,3,0	0/1:14,2:15:26.08:109,0,26	0/1:16,0:12:26.18:107,0,26	0/1:26,1:22:99:270,0,233	0/1:12,2:13:57.33:116,0,57	0/1:11,4:13:99:245,0,168	0/0:8,4:12:1.24:0,1,4	0/1:6,2:7:29.63:30,0,31	0/1:6,1:6:28.09:89,0,28	1/1:11,2:9:8.87:123,9,0	1/1:11,2:12:9.65:123,10,0	1/1:13,6:16:20.96:226,21,0	0/0:11,0:10:27.09:0,27,350	0/0:11,0:10:27.06:0,27,333	0/1:7,1:6:64.60:68,0,65	0/1:8,3:10:32.19:32,0,58	1/1:10,0:4:6.02:85,6,0	0/1:11,1:10:32.64:34,0,33	1/1:9,5:13:2.94:25,3,0	./.	0/0:11,3:13:5.91:0,6,46	0/1:10,1:8:95.17:97,0,95	0/1:18,5:20:25.28:312,0,25	0/0:10,0:2:3:0,3,25
chr10	28135105	.	T	TAG	129.41	PASS	AC=20;AF=1.000;AN=20;DP=38;FS=0.000;HRun=0;HaplotypeScore=20.0498;InbreedingCoeff=0.0551;MQ=26.64;MQ0=10;QD=4.79;VQSLOD=1.4196;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,0:1:2.37:8,2,0	./.	./.	./.	./.	1/1:3,0:3:2.50:9,2,0	./.	./.	./.	./.	./.	./.	1/1:1,0:1:2.04:6,2,0	1/1:2,1:3:5.50:36,5,0	./.	./.	./.	1/1:4,1:3:3.01:30,3,0	1/1:3,0:2:3.47:10,3,0	1/1:2,1:1:3:29,3,0	1/1:2,0:2:2.74:12,3,0	1/1:2,2:4:8.20:50,8,0	1/1:1,0:1:2.68:11,3,0	./.	./.	./.	./.	./.
chr10	28139599	.	C	CTA	626.45	PASS	AB=0.917;AC=28;AF=0.778;AN=36;BaseQRankSum=2.112;DP=59;FS=21.408;HRun=0;HaplotypeScore=18.4576;InbreedingCoeff=0.2722;MQ=121.92;MQ0=3;MQRankSum=-4.482;QD=16.93;ReadPosRankSum=-4.209;VQSLOD=0.8420;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,0:2:3.01:50,3,0	./.	0/0:8,0:8:24.08:0,24,378	0/0:9,0:9:22.62:0,23,315	1/1:0,1:2:3.01:58,3,0	1/1:3,0:2:2.97:20,3,0	./.	0/1:2,0:1:0:0,0,0	1/1:2,1:3:5.98:78,6,0	1/1:3,0:2:3.01:58,3,0	1/1:1,0:1:2.98:21,3,0	1/1:1,1:2:5.98:70,6,0	./.	./.	./.	1/1:1,2:2:6.02:116,6,0	./.	./.	0/0:4,0:3:1.29:0,1,28	1/1:4,0:3:3.01:51,3,0	0/1:4,1:4:21.25:62,0,21	1/1:1,0:1:3:26,3,0	./.	./.	1/1:1,0:1:3.01:49,3,0	1/1:3,0:3:3:25,3,0	1/1:1,1:1:3.01:58,3,0	./.
chr10	28139600	.	C	CTAA	5165.01	PASS	AB=1.000;AC=44;AF=0.846;AN=52;BaseQRankSum=0.166;DP=185;FS=15.837;HRun=0;HaplotypeScore=181.8005;InbreedingCoeff=0.4110;MQ=73.23;MQ0=2;MQRankSum=-4.455;QD=31.30;ReadPosRankSum=-0.538;VQSLOD=4.1347;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,1:2:3.01:68,3,0	1/1:5,0:5:4.01:119,4,0	0/0:8,0:8:24.08:0,24,392	0/0:9,0:9:23.44:0,23,371	1/1:11,0:11:15.12:330,15,0	1/1:10,0:9:3.89:218,4,0	./.	1/1:6,0:5:10.26:148,10,0	1/1:4,0:4:12.03:161,12,0	1/1:6,1:7:13.60:213,14,0	1/1:9,0:9:19.60:315,20,0	1/1:6,0:6:11.96:214,12,0	1/1:7,0:7:13.39:180,13,0	1/1:3,0:3:1.12:54,1,0	1/1:6,0:6:6.76:156,7,0	1/1:7,0:6:13.57:220,14,0	1/1:5,0:5:11.70:209,12,0	./.	0/1:7,0:7:6.40:154,0,6	1/1:14,1:14:32.11:458,32,0	0/1:6,0:6:14.55:101,0,15	1/1:9,0:9:22.16:348,22,0	1/1:7,0:7:15.86:205,16,0	0/0:2,0:2:0.47:0,0,1	1/1:8,1:9:25.59:345,26,0	1/1:11,0:11:30.09:507,30,0	1/1:10,0:9:24.93:400,25,0	1/1:1,0:1:3.01:41,3,0
chr10	28140397	.	ATTATTATTATTT	A	3902.91	PASS	AB=1.000;AC=40;AF=0.800;AN=50;BaseQRankSum=-3.049;DP=193;FS=0.000;HRun=0;HaplotypeScore=56.8771;InbreedingCoeff=0.3189;MQ=66.32;MQ0=0;MQRankSum=-1.153;QD=25.02;ReadPosRankSum=-0.361;VQSLOD=1.9012;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,12:14:9.03:286,9,0	1/1:3,0:3:3:25,3,0	0/0:7,0:6:3.01:0,3,142	0/0:6,0:4:3.01:0,3,83	1/1:1,8:9:11.86:206,12,0	1/1:1,10:11:15.05:521,15,0	1/1:3,0:3:8.85:57,9,0	0/1:29,0:29:45.88:578,0,46	1/1:1,0:1:3:25,3,0	1/1:1,6:7:16.22:288,16,0	1/1:2,2:4:3.01:107,3,0	1/1:1,5:6:9.03:296,9,0	1/1:1,6:7:6.49:216,6,0	./.	1/1:3,5:8:6.02:215,6,0	1/1:1,1:2:3.01:107,3,0	0/0:18,0:18:15.05:0,15,420	0/0:4,0:4:3.01:0,3,86	1/1:3,0:3:8.98:73,9,0	1/1:5,0:5:8.95:93,9,0	1/1:3,0:3:9:156,9,0	./.	./.	1/1:1,3:4:6.02:215,6,0	1/1:1,5:6:6.02:214,6,0	0/1:3,0:3:26.85:46,0,27	1/1:19,0:19:14.97:149,15,0	1/1:9,0:9:3.01:30,3,0
chr10	28140400	.	ATTATTATTT	A	3066.10	PASS	AB=1.000;AC=43;AF=0.827;AN=52;BaseQRankSum=-2.038;DP=179;FS=0.000;HRun=0;HaplotypeScore=46.8877;InbreedingCoeff=0.3765;MQ=54.09;MQ0=1;MQRankSum=-1.790;QD=20.58;ReadPosRankSum=-1.350;VQSLOD=1.7772;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:14:9.03:167,9,0	1/1:2,0:2:3:25,3,0	0/0:4,0:3:3.01:0,3,105	0/0:4,0:2:3.01:0,3,57	1/1:9,0:9:11.85:127,12,0	1/1:10,0:10:15.05:322,15,0	1/1:3,0:3:8.85:57,9,0	0/1:27,0:27:10.69:491,0,11	1/1:1,0:1:3:25,3,0	1/1:7,0:7:16.21:183,16,0	1/1:3,0:3:3.01:68,3,0	1/1:6,0:6:9.03:176,9,0	1/1:7,0:7:6.49:136,6,0	1/1:2,0:2:2.92:17,3,0	1/1:7,0:7:6.02:135,6,0	1/1:2,0:2:3.01:68,3,0	0/0:17,0:17:15.05:0,15,232	0/0:4,0:4:3.01:0,3,47	1/1:4,0:4:11.96:95,12,0	1/1:4,0:4:8.94:68,9,0	1/1:3,0:3:9:116,9,0	./.	./.	1/1:4,0:4:6.02:135,6,0	1/1:5,0:5:6.02:134,6,0	1/1:1,3:3:8.96:132,9,0	1/1:1,15:16:15.05:438,15,0	1/1:3,6:9:3.01:88,3,0
chr10	28142280	.	CT	C	14615.52	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=7.859;DP=463;FS=27.972;HRun=2;HaplotypeScore=46.5260;InbreedingCoeff=0.9640;MQ=69.83;MQ0=0;MQRankSum=-0.269;QD=36.00;ReadPosRankSum=3.025;VQSLOD=2.7890;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,17:18:21.62:445,22,0	1/1:0,8:8:18.06:234,18,0	0/0:5,0:4:6.15:0,6,101	0/0:12,0:11:26.87:0,27,307	1/1:0,18:18:51.10:636,51,0	1/1:1,16:17:45.15:584,45,0	1/1:0,10:10:24.08:311,24,0	1/1:0,34:34:99:1295,102,0	1/1:0,13:13:36.12:467,36,0	1/1:0,25:25:75.24:974,75,0	1/1:0,23:23:66.21:852,66,0	1/1:0,9:9:27.09:351,27,0	1/1:0,20:20:51.17:662,51,0	1/1:0,13:13:39.13:506,39,0	1/1:1,15:16:45.15:584,45,0	1/1:0,16:16:45.15:584,45,0	0/0:27,0:27:81.27:0,81,1213	0/0:13,0:13:39.11:0,39,562	1/1:0,20:20:60.17:762,60,0	1/1:0,26:26:72.23:935,72,0	1/1:0,9:9:27.09:351,27,0	1/1:0,7:7:21.07:273,21,0	1/1:0,8:8:24.08:312,24,0	1/1:0,10:10:27.09:350,27,0	1/1:0,11:11:30.10:389,30,0	1/1:1,20:21:60.19:777,60,0	1/1:1,39:40:99:1440,111,0	1/1:1,13:14:42.14:541,42,0
chr10	28143427	.	C	CT	14735.72	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=0.255;DP=438;FS=9.569;HRun=0;HaplotypeScore=86.4229;InbreedingCoeff=0.9256;MQ=74.98;MQ0=0;MQRankSum=-4.853;QD=35.68;ReadPosRankSum=4.325;VQSLOD=3.9677;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,29:29:72.24:1095,72,0	1/1:0,5:5:9.03:138,9,0	0/0:10,0:10:21.02:0,21,234	0/0:14,0:14:12.63:0,13,233	1/1:0,16:16:32.99:448,33,0	1/1:0,5:5:15.05:229,15,0	1/1:0,14:14:30.10:459,30,0	1/1:2,16:18:41.93:547,42,0	1/1:0,14:14:33.11:483,33,0	1/1:1,14:15:42.13:623,42,0	1/1:0,16:16:39.13:596,39,0	1/1:0,16:16:36.12:549,36,0	1/1:1,12:13:33.11:500,33,0	1/1:0,21:21:57.19:866,57,0	1/1:0,19:19:48.16:731,48,0	1/1:2,14:16:30.10:458,30,0	1/1:0,15:16:36.12:535,36,0	1/1:0,12:12:30.10:457,30,0	1/1:1,9:10:27.09:412,27,0	1/1:0,11:11:24.08:367,24,0	1/1:0,42:42:99:1651,108,0	1/1:2,15:17:36.12:551,36,0	1/1:0,12:12:33.11:505,33,0	1/1:1,16:17:45.15:672,45,0	1/1:0,7:7:18.06:276,18,0	1/1:0,16:16:45.12:647,45,0	1/1:6,23:29:51.06:758,51,0	1/1:1,6:7:12.04:183,12,0
chr10	28143971	.	T	TGG	2684.37	PASS	AB=0.872;AC=28;AF=0.500;AN=56;BaseQRankSum=6.648;DP=413;FS=61.550;HRun=0;HaplotypeScore=125.5825;InbreedingCoeff=-0.6282;MQ=50.32;MQ0=38;MQRankSum=-0.639;QD=7.52;ReadPosRankSum=8.415;VQSLOD=0.7810;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:14,4:15:60.37:191,0,60	0/1:4,0:4:2.22:22,0,2	0/0:29,0:12:29.77:0,30,333	0/1:35,0:13:7.44:7,0,114	0/1:15,4:18:98.79:254,0,99	1/1:16,2:14:3.39:163,3,0	0/1:9,2:10:61.71:62,0,97	0/1:28,0:25:86.38:86,0,379	0/1:8,4:12:19.88:200,0,20	0/1:12,3:13:21.13:245,0,21	0/1:12,1:10:54.33:54,0,56	0/1:5,1:6:32.90:72,0,33	0/1:9,3:11:56.04:118,0,56	0/1:10,1:9:37.34:37,0,81	0/1:7,5:12:57.20:172,0,57	0/1:7,3:8:25.04:135,0,25	0/0:27,0:23:11.08:0,11,213	0/1:17,0:12:1.23:1,0,40	0/1:13,2:14:99:111,0,204	0/1:13,1:12:4.33:148,0,4	0/1:4,2:6:30.93:84,0,31	0/1:8,0:7:24.74:25,0,64	0/1:8,2:8:1.04:93,0,1	1/1:4,2:5:9.02:101,9,0	0/1:11,3:10:39.05:138,0,39	0/1:14,3:17:91.37:166,0,91	0/1:16,0:11:58.74:59,0,103	0/1:7,1:8:20.48:92,0,20
chr10	28143980	.	TTGGTTC	T	6269.17	PASS	AB=0.991;AC=45;AF=0.804;AN=56;BaseQRankSum=1.282;DP=410;FS=1.562;HRun=0;HaplotypeScore=120.3336;InbreedingCoeff=-0.0489;MQ=43.12;MQ0=41;MQRankSum=0.060;QD=16.54;ReadPosRankSum=-1.558;VQSLOD=3.8887;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:21,0:18:9.64:327,0,10	1/1:5,0:5:9.03:153,9,0	0/1:17,0:7:34.88:58,0,35	0/0:31,0:12:7.77:0,8,48	1/1:21,0:18:22.54:228,23,0	1/1:18,1:15:42.12:639,42,0	1/1:12,0:12:20.97:196,21,0	1/1:29,0:27:15.54:481,16,0	0/1:11,1:12:2.19:247,0,2	1/1:15,0:13:31.12:372,31,0	1/1:11,0:8:8.35:178,8,0	1/1:5,0:5:11.53:156,12,0	1/1:14,0:12:13.36:164,13,0	0/1:11,0:9:11.72:127,0,12	0/1:14,0:14:6.61:239,0,7	1/1:8,0:6:14.97:146,15,0	0/1:26,0:21:59.13:59,0,356	0/1:15,0:10:85.15:237,0,85	0/1:16,0:14:59.15:314,0,59	1/1:18,0:15:20.17:277,20,0	0/1:6,0:6:24.82:140,0,25	1/1:8,0:7:6.07:54,6,0	1/1:13,0:11:21.04:279,21,0	1/1:7,0:6:8.76:104,9,0	1/1:13,1:10:24.05:311,24,0	1/1:17,0:17:38.50:423,39,0	1/1:16,0:11:20.11:211,20,0	1/1:8,1:9:12.33:147,12,0
chr10	28143981	.	TGGTTC	T	6477.84	PASS	AB=0.685;AC=45;AF=0.804;AN=56;BaseQRankSum=1.817;DP=341;FS=0.762;HRun=0;HaplotypeScore=96.8181;InbreedingCoeff=-0.0832;MQ=43.50;MQ0=40;MQRankSum=-1.509;QD=20.56;ReadPosRankSum=-0.444;VQSLOD=4.0673;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:5,6:13:19.95:250,0,20	1/1:0,4:5:9.03:160,9,0	0/1:11,2:7:20.86:73,0,21	0/0:23,0:10:8.18:0,8,41	1/1:7,7:13:23.71:258,24,0	1/1:7,5:14:42.12:678,42,0	1/1:1,3:8:19.56:223,20,0	1/1:7,9:16:7.24:474,7,0	0/1:4,2:11:11.24:287,0,11	1/1:5,2:10:28.86:396,29,0	1/1:5,5:8:13.28:195,13,0	1/1:0,3:4:9.03:151,9,0	1/1:6,2:8:9.77:163,10,0	0/1:5,3:7:12.91:125,0,13	0/1:5,2:12:10.81:267,0,11	1/1:3,2:5:12.49:151,12,0	0/1:22,4:21:68.11:68,0,326	0/1:8,7:10:74.25:250,0,74	0/1:6,7:13:70.90:324,0,71	1/1:7,7:12:17.93:267,18,0	0/1:2,1:5:26.80:146,0,27	1/1:5,0:5:3.01:49,3,0	1/1:3,8:11:21.06:303,21,0	1/1:3,1:4:9.03:121,9,0	1/1:6,4:10:24.07:341,24,0	1/1:5,7:13:30.43:401,30,0	1/1:8,3:8:16.99:219,17,0	1/1:5,2:7:8.30:137,8,0
chr10	28143985	.	TC	T	2075.88	PASS	AB=0.954;AC=46;AF=0.821;AN=56;BaseQRankSum=-1.022;DP=330;FS=5.550;HRun=1;HaplotypeScore=95.7519;InbreedingCoeff=0.0277;MQ=39.43;MQ0=39;MQRankSum=-2.127;QD=6.76;ReadPosRankSum=-3.533;VQSLOD=-0.6267;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,1:13:6.61:108,7,0	1/1:5,0:5:8.84:55,9,0	1/1:7,2:5:1.07:44,1,0	0/1:21,1:9:1.23:1,0,9	1/1:15,0:12:19.51:109,20,0	1/1:18,0:14:29.66:240,30,0	1/1:7,1:8:17.54:86,18,0	1/1:15,0:14:16.12:141,16,0	0/1:11,0:11:19.97:99,0,20	1/1:12,0:10:22.27:140,22,0	1/1:11,0:8:14.57:83,15,0	1/1:4,0:4:8.88:58,9,0	1/1:9,1:8:4.73:65,5,0	0/1:8,1:7:27.82:31,0,28	1/1:13,0:13:3.91:80,4,0	0/1:7,0:5:0.14:38,0,0	0/0:23,0:18:26.23:0,26,240	0/1:15,0:10:37.55:72,0,38	0/1:14,1:13:65.79:98,0,66	0/1:15,0:12:16.80:59,0,17	0/1:4,1:5:5.06:44,0,5	1/1:3,0:2:2.96:19,3,0	1/1:13,0:11:8.17:76,8,0	1/1:3,1:3:8.87:56,9,0	1/1:14,0:10:18.36:109,18,0	1/1:17,0:17:34.51:173,35,0	1/1:13,0:8:12.85:74,13,0	1/1:9,0:9:4.81:58,5,0
chr10	28145605	.	GA	G	242.83	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.300;DP=591;FS=0.934;HRun=9;HaplotypeScore=53.6861;InbreedingCoeff=0.9498;MQ=75.24;MQ0=0;MQRankSum=1.298;QD=17.35;ReadPosRankSum=2.225;VQSLOD=3.7925;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:42.01:0,42,454	0/0:9,0:9:24.07:0,24,277	0/0:11,0:10:12.03:0,12,129	0/0:12,0:11:24:0,24,241	0/0:40,1:41:66.89:0,67,1119	0/0:30,0:30:87.24:0,87,985	0/0:14,0:14:30.09:0,30,346	0/0:23,0:23:51.14:0,51,575	0/0:21,0:21:57.14:0,57,645	0/0:29,0:29:75.20:0,75,853	0/0:32,0:32:87.24:0,87,986	0/0:14,0:14:36.09:0,36,405	0/0:19,0:19:57.17:0,57,658	0/0:16,0:16:39.12:0,39,450	0/0:18,0:18:51.15:0,51,589	0/0:20,1:21:29.71:0,30,596	1/1:0,11:11:30.02:275,30,0	1/1:0,3:3:9:82,9,0	0/0:21,0:22:56.99:0,57,628	0/0:39,0:39:99:0,102,1151	0/0:15,0:15:36.11:0,36,415	0/0:20,1:21:32.69:0,33,614	0/0:35,0:35:99:0,99,1132	0/0:11,0:11:27.08:0,27,312	0/0:24,0:25:72.03:0,72,802	0/0:23,0:23:66.18:0,66,751	0/0:39,0:39:99:0,105,1174	0/0:21,0:21:63.19:0,63,725
chr10	28147575	.	CTT	C	752.44	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.934;DP=490;FS=0.000;HRun=9;HaplotypeScore=61.9767;InbreedingCoeff=0.9922;MQ=79.74;MQ0=0;MQRankSum=-2.748;QD=26.87;ReadPosRankSum=0.871;VQSLOD=3.3075;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:26:71.62:0,72,1008	0/0:7,0:7:21.07:0,21,345	0/0:15,0:16:33.63:0,34,462	0/0:16,0:15:26.89:0,27,358	0/0:17,0:17:48.16:0,48,765	0/0:17,0:19:47.62:0,48,676	0/0:13,0:13:33.11:0,33,536	0/0:30,0:30:54.17:0,54,861	0/0:19,0:19:48.15:0,48,761	0/0:15,0:15:42.14:0,42,689	0/0:21,0:21:51.17:0,51,837	0/0:11,0:11:33.10:0,33,514	0/0:22,0:22:54.18:0,54,868	0/0:19,0:19:57.19:0,57,936	0/0:21,0:21:63.19:0,63,957	0/0:17,0:16:39.13:0,39,637	1/1:0,13:13:33.10:385,33,0	1/1:0,15:15:42.12:489,42,0	0/0:27,0:27:68.72:0,69,1089	0/0:26,0:26:69.24:0,69,1127	0/0:7,0:7:18.06:0,18,295	0/0:19,0:19:57.13:0,57,880	0/0:16,0:16:42.14:0,42,688	0/0:16,0:16:48.14:0,48,738	0/0:10,0:10:30.09:0,30,470	0/0:14,0:14:39.12:0,39,617	0/0:24,0:25:71.70:0,72,1079	0/0:11,0:11:33.08:0,33,513
chr10	28149733	.	A	AT	14619.74	PASS	AB=0.542;AC=47;AF=0.839;AN=56;BaseQRankSum=-9.493;DP=563;FS=15.748;HRun=5;HaplotypeScore=49.2779;InbreedingCoeff=0.8373;MQ=58.48;MQ0=10;MQRankSum=3.028;QD=30.97;ReadPosRankSum=1.170;VQSLOD=3.6295;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,13:14:36.12:474,36,0	1/1:0,11:11:27.09:355,27,0	0/0:18,0:7:15.75:0,16,124	0/0:25,0:5:3:0,3,32	1/1:6,20:25:58.43:753,58,0	1/1:2,24:26:54.18:711,54,0	0/1:2,11:13:5.05:289,0,5	1/1:3,22:19:42.12:528,42,0	1/1:5,22:27:60.20:789,60,0	1/1:1,19:20:54.18:711,54,0	1/1:0,12:12:24.08:316,24,0	1/1:0,16:16:36.12:474,36,0	1/1:1,20:21:57.19:750,57,0	1/1:3,15:18:45.14:585,45,0	1/1:1,26:27:72.23:947,72,0	1/1:0,16:16:42.13:553,42,0	0/0:24,0:24:69.17:0,69,741	0/0:22,0:23:60.15:0,60,645	1/1:5,13:18:42.14:548,42,0	1/1:3,21:24:60.20:790,60,0	1/1:0,18:18:48.16:632,48,0	1/1:1,18:18:42.14:553,42,0	1/1:2,13:14:33.11:434,33,0	1/1:2,7:9:21.07:276,21,0	1/1:2,27:29:66.21:869,66,0	1/1:2,17:18:51.06:588,51,0	1/1:2,42:43:99:1500,114,0	1/1:0,5:5:15.05:197,15,0
chr10	28151039	.	GTT	G	5915.72	PASS	AB=0.650;AC=51;AF=0.911;AN=56;BaseQRankSum=0.026;DP=447;FS=1.081;HRun=14;HaplotypeScore=151.2170;InbreedingCoeff=0.7411;MQ=53.94;MQ0=3;MQRankSum=-1.229;QD=14.98;ReadPosRankSum=3.655;VQSLOD=2.7234;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,13:19:27.66:239,28,0	1/1:0,4:4:12.01:111,12,0	0/0:25,0:13:16.39:0,16,189	0/0:27,0:14:20.50:0,21,193	1/1:5,17:23:41.23:343,41,0	1/1:4,10:15:32.49:264,32,0	1/1:2,7:8:14.99:139,15,0	1/1:12,0:22:21.45:92,21,0	1/1:3,16:19:48.01:442,48,0	1/1:5,9:14:32.95:297,33,0	1/1:6,13:21:37.49:319,37,0	1/1:1,6:7:15.73:128,16,0	1/1:1,8:9:24.01:222,24,0	1/1:2,10:13:29.22:257,29,0	1/1:2,15:18:47.76:425,48,0	1/1:2,8:10:24.01:221,24,0	1/1:6,0:13:15.33:76,15,0	0/1:5,0:13:9.67:59,0,10	1/1:7,9:18:27.40:236,27,0	1/1:8,19:28:53.59:471,54,0	1/1:2,6:7:10.69:109,11,0	1/1:2,13:15:35.93:321,36,0	1/1:5,12:18:23.64:206,24,0	1/1:1,9:10:18.02:167,18,0	1/1:4,10:16:32.45:272,32,0	1/1:5,1:19:41.34:193,41,0	1/1:4,0:23:52.12:225,52,0	1/1:1,0:8:19.20:83,19,0
chr10	28151071	.	CTTTG	C	14171.35	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=0.847;DP=516;FS=4.028;HRun=0;HaplotypeScore=165.4514;InbreedingCoeff=0.9493;MQ=60.41;MQ0=2;MQRankSum=-5.580;QD=33.74;ReadPosRankSum=3.873;VQSLOD=4.8797;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,24:33:63.13:1010,63,0	1/1:2,6:8:9.03:156,9,0	0/0:33,0:18:18.40:0,18,518	0/0:31,1:18:17.74:0,18,207	1/1:8,28:36:72.16:1153,72,0	1/1:0,13:13:33.11:536,33,0	1/1:3,7:9:15.05:257,15,0	1/1:4,3:7:12.01:177,12,0	1/1:6,15:21:45.15:758,45,0	1/1:3,14:17:39:549,39,0	1/1:7,13:20:44.88:606,45,0	1/1:2,9:11:27.06:436,27,0	1/1:1,17:18:33.11:571,33,0	1/1:3,16:19:33.10:542,33,0	1/1:3,16:19:48.16:802,48,0	1/1:1,11:12:33.11:572,33,0	0/0:15,0:15:39.11:0,39,884	0/0:15,0:15:36.49:0,36,683	1/1:8,11:18:42.01:560,42,0	1/1:3,23:26:72.07:1138,72,0	1/1:3,6:8:15:225,15,0	1/1:2,14:16:39.04:610,39,0	1/1:3,12:15:30.10:486,30,0	1/1:8,3:11:14.81:125,15,0	1/1:3,16:19:45.15:737,45,0	1/1:5,18:23:60.02:907,60,0	1/1:4,22:26:63.19:1050,63,0	1/1:4,8:12:12.04:208,12,0
chr10	28151205	.	TC	T	1554.90	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.157;DP=643;FS=2.816;HRun=1;HaplotypeScore=54.1651;InbreedingCoeff=0.9838;MQ=54.17;MQ0=65;MQRankSum=-0.384;QD=33.80;ReadPosRankSum=1.618;VQSLOD=3.4119;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:93.23:0,93,1376	0/0:7,0:7:21.07:0,21,321	0/0:52,0:8:18.06:0,18,275	0/0:43,0:6:15.04:0,15,209	0/0:24,0:24:66.21:0,66,982	0/0:23,0:23:69.23:0,69,1054	0/0:16,0:13:36.12:0,36,545	0/0:30,0:26:78.25:0,78,1151	0/0:25,0:25:72.18:0,72,1052	0/0:21,0:21:63.21:0,63,948	0/0:20,0:20:41.40:0,41,746	0/0:17,0:17:48.15:0,48,700	0/0:19,0:19:54.14:0,54,761	0/0:16,0:16:48.15:0,48,705	0/0:21,0:21:63.21:0,63,953	0/0:17,0:17:51.17:0,51,780	1/1:3,21:24:69.19:922,69,0	1/1:3,19:22:21.89:754,22,0	0/0:19,0:16:48.12:0,48,708	0/0:26,0:26:78.22:0,78,1122	0/0:12,0:12:36.07:0,36,504	0/0:21,0:21:63.21:0,63,964	0/0:20,0:20:60.19:0,60,894	0/0:17,0:17:51.14:0,51,730	0/0:24,0:24:72.23:0,72,1081	0/0:25,0:25:71.91:0,72,1031	0/0:37,0:37:99:0,111,1608	0/0:13,0:13:39.13:0,39,596
chr10	28151285	.	AT	A	1306.87	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=10.576;DP=709;FS=15.298;HRun=8;HaplotypeScore=73.3952;InbreedingCoeff=0.9955;MQ=58.86;MQ0=1;MQRankSum=0.728;QD=22.15;ReadPosRankSum=2.910;VQSLOD=2.8019;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:56.19:0,56,645	0/0:8,0:8:21.06:0,21,254	0/0:16,0:12:29.80:0,30,387	0/0:18,0:14:38.92:0,39,419	0/0:36,0:37:99:0,105,1267	0/0:17,0:16:45.13:0,45,532	0/0:28,0:28:72.12:0,72,825	0/0:29,0:29:78.23:0,78,927	0/0:22,0:22:57.17:0,57,679	0/0:26,0:26:66.20:0,66,797	0/0:25,0:25:72.18:0,72,853	0/0:24,0:24:63.17:0,63,733	0/0:34,0:34:99:0,99,1187	0/0:27,0:27:81.25:0,81,975	0/0:36,0:36:96.28:0,96,1146	0/0:26,0:26:75.23:0,75,905	1/1:1,24:26:69.21:690,69,0	1/1:5,28:33:63.21:738,63,0	0/0:17,0:17:42.13:0,42,505	0/0:44,0:44:99:0,123,1451	0/0:19,0:19:54.17:0,54,652	0/0:28,0:28:84.13:0,84,965	0/0:20,0:20:57.13:0,57,672	0/0:26,0:26:75.23:0,75,906	0/0:18,0:18:54.15:0,54,639	0/0:28,0:28:81.24:0,81,967	0/0:43,1:43:88.85:0,89,1348	0/0:7,0:7:21.06:0,21,254
chr10	28151730	.	A	AT	18360.24	PASS	AB=1.000;AC=53;AF=0.946;AN=56;BaseQRankSum=-3.863;DP=651;FS=10.124;HRun=7;HaplotypeScore=54.7859;InbreedingCoeff=0.5708;MQ=56.38;MQ0=11;MQRankSum=4.280;QD=28.69;ReadPosRankSum=3.041;VQSLOD=5.1043;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,27:30:69.17:817,69,0	1/1:1,11:12:27.08:326,27,0	0/0:11,0:2:5.93:0,6,46	0/1:22,0:8:11.81:12,0,148	1/1:3,36:39:99:1268,105,0	1/1:5,21:26:63.19:761,63,0	1/1:0,8:8:23.81:266,24,0	1/1:10,23:26:54.15:640,54,0	1/1:2,16:18:45.14:543,45,0	1/1:7,33:40:99:1193,99,0	1/1:4,26:30:78.24:942,78,0	1/1:1,15:16:45.14:544,45,0	1/1:3,23:26:69.20:832,69,0	1/1:2,19:22:60.18:722,60,0	1/1:3,18:21:54.17:652,54,0	1/1:2,18:20:45.14:544,45,0	1/1:1,24:25:66.20:797,66,0	1/1:2,22:24:66.20:795,66,0	1/1:3,17:16:48.07:537,48,0	1/1:3,29:32:81.22:963,81,0	1/1:1,12:13:36.11:435,36,0	1/1:2,22:24:57.17:689,57,0	1/1:3,27:29:75.23:906,75,0	1/1:1,16:18:48.07:552,48,0	1/1:3,19:22:48.15:580,48,0	1/1:4,26:29:55.38:921,55,0	1/1:6,27:33:78.24:942,78,0	1/1:0,5:5:15.05:181,15,0
chr10	28151862	.	GTCTGTC	G	296.52	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=4.013;DP=642;FS=16.382;HRun=0;HaplotypeScore=123.5318;InbreedingCoeff=0.8544;MQ=66.64;MQ0=7;MQRankSum=-3.562;QD=10.22;ReadPosRankSum=-1.469;VQSLOD=1.2333;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:42.14:0,42,1350	0/0:8,0:8:15.05:0,15,482	0/0:54,0:29:21.07:0,21,486	0/0:43,0:27:4.11:0,4,238	0/0:22,0:22:42.13:0,42,1273	0/0:27,0:27:54.19:0,54,1683	0/0:10,0:10:21.07:0,21,623	0/0:43,0:36:42.12:0,42,1024	0/0:23,0:23:33.11:0,33,1034	0/0:42,0:41:81.27:0,81,2483	0/0:12,0:12:18.06:0,18,577	0/0:12,0:12:18.06:0,18,580	0/0:30,0:30:54.17:0,54,1661	0/0:19,0:19:27.09:0,27,871	0/0:21,0:21:48.16:0,48,1511	0/0:21,0:21:42.14:0,42,1353	1/1:14,3:16:12.04:222,12,0	1/1:9,3:12:9.03:182,9,0	0/0:16,0:12:21.07:0,21,676	0/0:25,0:25:69.24:0,69,2200	0/0:24,0:24:39.13:0,39,1175	0/0:17,0:17:42.14:0,42,1280	0/0:26,0:26:45.14:0,45,1373	0/0:26,0:26:42.09:0,42,1246	0/0:13,0:13:26.92:0,27,789	0/0:25,0:25:48.16:0,48,1481	0/0:20,0:20:45.15:0,45,1425	0/0:8,0:8:15.05:0,15,483
chr10	28154733	.	A	AT	398.53	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-5.543;DP=437;FS=7.613;HRun=7;HaplotypeScore=39.1127;InbreedingCoeff=0.8386;MQ=73.22;MQ0=0;MQRankSum=-1.208;QD=23.44;ReadPosRankSum=0.249;VQSLOD=3.1364;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:8:24.04:0,24,232	0/0:4,0:4:12.02:0,12,116	0/0:7,0:8:18.03:0,18,174	0/0:7,0:7:12.02:0,12,114	0/0:24,0:24:51.06:0,51,492	0/0:20,0:20:57.06:0,57,539	0/0:14,0:14:36.05:0,36,347	0/0:31,0:31:81.11:0,81,775	0/0:20,0:20:57.06:0,57,542	0/0:21,0:21:54.09:0,54,522	0/0:26,0:26:69.09:0,69,661	0/0:12,0:12:30.04:0,30,290	0/0:19,0:19:57.08:0,57,545	0/0:12,0:12:36.02:0,36,337	0/0:16,0:16:42.07:0,42,406	0/0:16,0:16:48.04:0,48,455	1/1:2,1:3:3.01:36,3,0	1/1:1,13:14:39.12:471,39,0	0/0:21,0:21:54.03:0,54,501	0/0:19,0:19:54.06:0,54,511	0/0:3,0:3:9.01:0,9,87	0/0:11,0:11:33.05:0,33,319	0/0:21,0:21:54.06:0,54,516	0/0:9,0:9:27.02:0,27,254	0/0:16,0:16:42.06:0,42,405	0/0:24,0:24:66.09:0,66,633	0/0:29,0:29:81.11:0,81,775	0/0:9,0:9:27.04:0,27,261
chr10	28154995	.	T	TA	940.03	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-3.571;DP=440;FS=1.561;HRun=1;HaplotypeScore=42.7785;InbreedingCoeff=0.8998;MQ=68.74;MQ0=0;MQRankSum=-2.489;QD=31.33;ReadPosRankSum=-0.144;VQSLOD=3.1580;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:45.04:0,45,527	0/0:5,0:5:15.05:0,15,193	0/0:15,0:12:17.32:0,17,199	0/0:8,1:7:2.93:0,3,105	0/0:23,0:23:66.18:0,66,811	0/0:19,0:19:54.16:0,54,671	0/0:11,0:11:33.08:0,33,398	0/0:25,0:25:63.19:0,63,792	0/0:15,0:15:45.15:0,45,579	0/0:21,0:21:63.19:0,63,794	0/0:32,0:32:96.26:0,96,1181	0/0:10,0:10:24.07:0,24,297	0/0:15,0:15:42.11:0,42,512	0/0:11,0:11:30.08:0,30,361	0/0:8,0:8:24.08:0,24,309	0/0:15,0:15:45.11:0,45,539	1/1:0,14:14:42.14:583,42,0	1/1:1,15:16:36.09:478,36,0	0/0:16,0:16:45.13:0,45,561	0/0:25,0:25:75.19:0,75,901	0/0:10,0:10:30.09:0,30,375	0/0:16,0:16:45.12:0,45,552	0/0:21,0:21:63.09:0,63,710	0/0:10,0:10:27.09:0,27,348	0/0:16,0:16:48:0,48,554	0/0:19,0:19:54.14:0,54,648	0/0:20,0:20:54.15:0,54,670	0/0:7,0:7:21.04:0,21,253
chr10	28155590	.	CTGTT	C	18058.09	PASS	AB=0.630;AC=47;AF=0.839;AN=56;BaseQRankSum=6.061;DP=656;FS=4.176;HRun=0;HaplotypeScore=103.0933;InbreedingCoeff=0.8665;MQ=61.68;MQ0=6;MQRankSum=-1.572;QD=32.13;ReadPosRankSum=5.688;VQSLOD=4.7444;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,26:28:51.17:865,51,0	1/1:0,8:8:18.06:318,18,0	0/0:24,0:13:21.06:0,21,411	0/0:34,0:24:44.93:0,45,916	1/1:1,20:21:42.14:711,42,0	1/1:2,22:23:30.10:529,30,0	1/1:1,20:21:24.08:424,24,0	1/1:4,15:19:45.14:729,45,0	1/1:2,24:26:38.96:688,39,0	1/1:3,19:22:57.17:942,57,0	1/1:1,15:16:39.13:641,39,0	1/1:4,15:17:24.08:424,24,0	1/1:5,22:27:41.97:740,42,0	1/1:3,22:25:42.14:710,42,0	1/1:2,33:35:54.18:920,54,0	1/1:0,19:19:45.15:783,45,0	0/0:22,0:23:57.11:0,57,1145	0/0:13,0:13:33.11:0,33,752	1/1:5,20:25:54.11:784,54,0	1/1:1,29:30:69.23:1085,69,0	1/1:1,25:26:57.20:1006,57,0	1/1:1,28:29:75.21:1205,75,0	1/1:3,20:23:39.13:689,39,0	1/1:2,22:24:45.15:778,45,0	1/1:2,19:21:48.16:822,48,0	1/1:4,18:22:54.17:907,54,0	1/1:3,31:34:63.69:1112,64,0	0/1:7,10:17:15.76:247,0,16
chr10	28157472	.	C	CTT	193.90	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=1.521;DP=692;FS=1.503;HRun=8;HaplotypeScore=103.2834;InbreedingCoeff=0.9873;MQ=88.74;MQ0=0;MQRankSum=-1.730;QD=12.93;ReadPosRankSum=-0.823;VQSLOD=1.0067;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:42.11:0,42,468	0/0:20,0:20:48.11:0,48,535	0/0:26,0:26:54.08:0,54,569	0/0:26,0:26:54.34:0,54,552	0/0:36,0:36:90.20:0,90,994	0/0:27,0:27:78.68:0,79,871	0/0:33,0:33:93.21:0,93,1027	0/0:40,0:40:99:0,111,1222	0/0:27,0:27:78.19:0,78,860	0/0:33,0:33:84.21:0,84,934	0/0:20,0:20:51.13:0,51,569	0/0:25,0:25:72.19:0,72,801	0/0:34,0:34:99:0,99,1103	0/0:23,0:23:62.63:0,63,669	0/0:19,0:19:54.15:0,54,602	0/0:19,0:19:48.12:0,48,535	1/1:4,11:15:18.06:284,18,0	0/0:18,0:18:42.10:0,42,468	0/0:13,0:13:33.08:0,33,368	0/0:31,0:31:72.15:0,72,803	0/0:11,0:11:33.09:0,33,367	0/0:20,0:20:57.15:0,57,635	0/0:32,0:33:89.94:0,90,972	0/0:29,0:29:81.21:0,81,903	0/0:25,0:25:66.15:0,66,726	0/0:30,0:30:84.22:0,84,929	0/0:32,0:32:84.15:0,84,994	0/0:8,0:8:21.05:0,21,234
chr10	28158597	.	TG	T	1723.68	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.061;DP=565;FS=9.598;HRun=1;HaplotypeScore=52.8424;InbreedingCoeff=0.9906;MQ=73.17;MQ0=0;MQRankSum=-1.024;QD=35.18;ReadPosRankSum=3.770;VQSLOD=3.0207;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,105,1649	0/0:6,0:6:18.06:0,18,288	0/0:17,0:17:51.15:0,51,767	0/0:23,0:24:38.90:0,39,906	0/0:16,0:16:48.08:0,48,712	0/0:13,0:13:39.12:0,39,597	0/0:24,0:24:72.23:0,72,1115	0/0:28,0:28:81.24:0,81,1210	0/0:27,0:27:81.25:0,81,1267	0/0:21,0:21:63.21:0,63,985	0/0:15,0:15:45.13:0,45,671	0/0:21,0:21:63.21:0,63,1005	0/0:17,0:17:51.14:0,51,761	0/0:9,0:9:27.09:0,27,431	0/0:13,0:13:39.13:0,39,621	0/0:16,0:16:48.16:0,48,767	1/1:0,32:32:90.30:1258,90,0	1/1:0,17:17:42.14:587,42,0	0/0:23,0:23:66.22:0,66,1036	0/0:16,0:16:48.16:0,48,755	0/0:42,0:42:99:0,126,1982	0/0:19,0:19:57.11:0,57,875	0/0:10,0:10:27.09:0,27,432	0/0:26,0:26:78.27:0,78,1244	0/0:24,0:24:69.22:0,69,1075	0/0:25,0:25:75.24:0,75,1155	0/0:21,0:21:63.17:0,63,936	0/0:6,0:6:18.06:0,18,287
chr10	28159172	.	A	AT	777.81	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-5.284;DP=525;FS=3.609;HRun=8;HaplotypeScore=47.1724;InbreedingCoeff=0.9677;MQ=72.22;MQ0=0;MQRankSum=-0.349;QD=22.88;ReadPosRankSum=1.900;VQSLOD=4.1272;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:30.01:0,30,275	0/0:14,0:14:39.01:0,39,352	0/0:10,0:10:15:0,15,137	0/0:7,0:7:12.06:0,12,132	0/0:32,0:32:78.03:0,78,713	0/0:14,0:14:39.01:0,39,357	0/0:7,0:7:18:0,18,165	0/0:27,0:27:59.99:0,60,540	0/0:18,0:18:51.03:0,51,467	0/0:33,1:34:58.43:0,58,789	0/0:29,0:29:78.04:0,78,714	0/0:15,0:15:36.01:0,36,329	0/0:18,0:18:49.57:0,50,438	0/0:16,0:16:45.02:0,45,412	0/0:16,0:16:36.01:0,36,329	0/0:12,0:12:33.02:0,33,302	1/1:2,14:16:36.11:415,36,0	1/1:3,15:18:42.12:484,42,0	0/0:26,0:26:63:0,63,568	0/0:42,0:42:99:0,123,1125	0/0:8,0:8:21:0,21,192	0/0:18,0:18:51.03:0,51,466	0/0:19,0:19:54.01:0,54,488	0/0:16,0:16:42:0,42,378	0/0:26,0:26:75.04:0,75,686	0/0:25,0:25:63.01:0,63,572	0/0:21,0:21:60:0,60,542	0/0:8,0:8:21.01:0,21,192
chr10	28162219	.	C	CT	334.01	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-4.136;DP=408;FS=7.491;HRun=8;HaplotypeScore=40.1363;InbreedingCoeff=0.9100;MQ=75.46;MQ0=0;MQRankSum=-1.945;QD=19.65;ReadPosRankSum=0.224;VQSLOD=2.7373;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:30.01:0,30,274	0/0:6,0:6:17.98:0,18,158	0/0:11,0:11:19.25:0,19,163	0/0:4,0:4:9:0,9,82	0/0:22,0:22:57.03:0,57,522	0/0:21,0:21:53.99:0,54,484	0/0:4,0:4:9:0,9,82	0/0:31,0:31:48.71:0,49,626	0/0:19,0:19:44.05:0,44,457	0/0:23,0:23:60.01:0,60,544	0/0:11,0:11:33.02:0,33,302	0/0:9,0:9:24.01:0,24,220	0/0:22,0:22:63.03:0,63,577	0/0:14,0:14:42.02:0,42,384	0/0:16,0:16:48.03:0,48,439	0/0:18,0:18:45.02:0,45,412	1/1:3,9:12:27.08:312,27,0	1/1:1,4:5:12.04:138,12,0	0/0:10,0:10:27.01:0,27,247	0/0:22,0:22:62.99:0,63,568	0/0:11,0:11:33.02:0,33,302	0/0:11,0:11:30.02:0,30,275	0/0:13,0:13:36.02:0,36,330	0/0:7,0:7:15.01:0,15,137	0/0:19,0:19:54.03:0,54,494	0/0:20,0:20:57.03:0,57,522	0/0:20,0:20:47.99:0,48,435	0/0:15,0:15:39.02:0,39,357
chr10	28163397	.	CT	C	705.27	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.489;DP=466;FS=0.731;HRun=7;HaplotypeScore=41.2169;InbreedingCoeff=0.8990;MQ=69.52;MQ0=0;MQRankSum=-1.535;QD=22.75;ReadPosRankSum=2.269;VQSLOD=3.2664;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:8:20.59:0,21,263	0/0:11,0:11:33.09:0,33,402	0/0:7,0:7:3.47:0,3,131	0/0:5,0:5:12.04:0,12,151	0/0:31,0:31:84.25:0,84,1032	0/0:16,0:16:45.14:0,45,566	0/0:6,0:6:18.06:0,18,226	0/0:33,0:33:87.26:0,87,1073	0/0:11,0:11:33.11:0,33,415	0/0:21,0:21:60.19:0,60,755	0/0:42,0:42:99:0,120,1510	0/0:11,0:11:30.10:0,30,377	0/0:14,0:14:39.12:0,39,479	0/0:15,0:15:45.14:0,45,566	0/0:17,0:17:51.15:0,51,629	0/0:12,0:12:36.12:0,36,453	1/1:2,14:16:42.10:429,42,0	1/1:0,15:15:39.09:398,39,0	0/0:25,0:25:66.21:0,66,830	0/0:30,0:30:84.27:0,84,1056	0/0:12,0:12:27.09:0,27,339	0/0:10,0:10:30.10:0,30,377	0/0:19,0:19:54.17:0,54,679	0/0:8,0:8:24.03:0,24,284	0/0:17,0:17:42.13:0,42,528	0/0:20,0:20:57.18:0,57,717	0/0:27,0:27:72.22:0,72,893	0/0:7,0:7:21.07:0,21,264
chr10	28176984	.	CGTGTATGTGTGTGTGTGTGTGTGTGTGT	C	364.43	PASS	AB=0.509;AC=3;AF=0.054;AN=56;BaseQRankSum=3.938;DP=494;FS=1.259;HRun=0;HaplotypeScore=288.6918;InbreedingCoeff=0.6233;MQ=77.55;MQ0=13;MQRankSum=-2.427;QD=9.85;ReadPosRankSum=-0.030;VQSLOD=2.3166;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:30:60.55:0,61,3809	0/0:6,0:6:15.05:0,15,1276	0/0:36,0:21:53.65:0,54,607	0/0:41,0:24:45.02:0,45,1410	0/0:15,0:14:26.94:0,27,2374	0/0:23,0:23:57.10:0,57,4046	0/0:12,0:11:26.93:0,27,1436	0/0:22,0:21:51.09:0,51,2051	0/0:22,0:21:53.52:0,54,4399	0/0:22,0:22:62.95:0,63,2756	0/0:11,0:11:29.97:0,30,1838	0/0:13,0:13:33.11:0,33,3473	0/0:9,0:9:24.06:0,24,2047	0/0:14,0:14:28.63:0,29,1942	0/0:13,0:13:35.99:0,36,1813	0/0:13,0:13:32.75:0,33,2001	0/1:1,24:27:99:316,0,430	1/1:10,0:10:16.89:152,17,0	0/0:13,0:12:33.01:0,33,1137	0/0:12,0:11:21.02:0,21,1123	0/0:23,0:23:48.93:0,49,3046	0/0:13,0:13:39.06:0,39,2731	0/0:14,0:14:26.97:0,27,1568	0/0:22,0:22:58.41:0,58,4893	0/0:17,0:19:38.91:0,39,2577	0/0:18,0:18:45.10:0,45,2137	0/0:12,0:12:23.98:0,24,1718	0/0:7,0:8:21.03:0,21,1256
chr10	28177012	.	T	TC	95.22	PASS	AB=0.792;AC=2;AF=0.036;AN=56;BaseQRankSum=4.348;DP=510;FS=3.900;HRun=0;HaplotypeScore=59.9008;InbreedingCoeff=-0.0417;MQ=52.10;MQ0=22;MQRankSum=-3.491;QD=2.51;ReadPosRankSum=-0.998;VQSLOD=1.7807;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:40:89.81:0,90,1172	0/0:6,0:6:15.05:0,15,206	0/0:13,0:2:6.02:0,6,83	0/0:30,0:8:24.08:0,24,330	0/0:23,0:21:47.51:0,48,642	0/0:20,0:20:44.68:0,45,557	0/0:17,0:16:48.16:0,48,653	0/0:21,0:18:51.17:0,51,705	0/0:25,0:24:60.53:0,61,779	0/0:18,0:18:54.18:0,54,731	0/0:13,0:13:36.12:0,36,499	0/0:17,0:17:48.16:0,48,666	0/0:13,0:13:33.08:0,33,434	0/0:16,0:16:39.58:0,40,523	0/0:9,0:9:27.08:0,27,358	0/0:15,0:15:39.07:0,39,471	0/1:31,0:30:72.41:81,0,72	0/1:2,5:7:47.28:103,0,47	0/0:11,0:9:24.94:0,25,315	0/0:15,0:14:42.10:0,42,546	0/0:29,0:28:60.66:0,61,815	0/0:13,0:13:36.12:0,36,499	0/0:14,0:14:30.06:0,30,392	0/0:25,0:25:66.07:0,66,854	0/0:24,0:23:53.27:0,53,713	0/0:21,0:21:60.19:0,60,812	0/0:11,0:11:27.07:0,27,355	0/0:11,0:11:33.02:0,33,417
chr10	28178333	.	G	GA	640.83	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-6.160;DP=633;FS=3.669;HRun=9;HaplotypeScore=58.5465;InbreedingCoeff=0.9648;MQ=68.22;MQ0=0;MQRankSum=0.201;QD=22.89;ReadPosRankSum=1.313;VQSLOD=4.6919;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:56.96:0,57,490	0/0:13,0:13:32.98:0,33,284	0/0:18,0:17:38.71:0,39,311	0/0:5,0:5:8.99:0,9,78	0/0:47,0:47:99:0,129,1120	0/0:31,0:31:74.96:0,75,651	0/0:19,0:19:47.95:0,48,408	0/0:38,0:38:83.95:0,84,726	0/0:23,0:23:50.98:0,51,443	0/0:27,0:27:71.98:0,72,625	0/0:34,0:34:95.96:0,96,829	0/0:19,0:19:47.98:0,48,417	0/0:25,0:25:65.96:0,66,568	0/0:19,0:19:47.98:0,48,416	0/0:27,0:27:77.98:0,78,677	0/0:23,1:24:29.76:0,30,484	1/1:3,17:20:45.12:496,45,0	1/1:0,8:8:24.06:265,24,0	0/0:17,0:17:44.98:0,45,391	0/0:30,0:30:53.49:0,53,623	0/0:12,0:12:26.97:0,27,231	0/0:21,1:22:26.92:0,27,458	0/0:34,0:34:89.96:0,90,777	0/0:15,0:15:19.16:0,19,293	0/0:15,0:15:44.99:0,45,391	0/0:24,0:25:68:0,68,579	0/0:34,0:33:86.97:0,87,755	0/0:12,0:12:32.98:0,33,287
chr10	28178476	.	ATCT	A	22464.79	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=4.246;DP=610;FS=1.034;HRun=0;HaplotypeScore=101.1324;InbreedingCoeff=0.9855;MQ=79.54;MQ0=0;MQRankSum=-6.611;QD=41.99;ReadPosRankSum=3.743;VQSLOD=5.8552;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,34:34:87.30:1420,87,0	1/1:1,6:7:15.05:230,15,0	0/0:21,0:21:50.93:0,51,925	0/0:14,0:15:11.79:0,12,495	1/1:1,28:29:81.20:1252,81,0	1/1:3,15:18:45.15:734,45,0	1/1:1,22:23:57.19:931,57,0	1/1:4,27:31:78.25:1247,78,0	1/1:0,15:15:42.14:686,42,0	1/1:0,26:26:78.27:1270,78,0	1/1:3,25:28:60.20:979,60,0	1/1:1,15:16:45.15:735,45,0	1/1:1,19:20:57.19:931,57,0	1/1:0,30:30:78.27:1263,78,0	1/1:2,21:23:63.22:1029,63,0	1/1:1,20:21:54.14:853,54,0	0/0:31,0:31:90.31:0,90,2007	0/0:8,0:8:24.08:0,24,536	1/1:1,15:16:45.13:707,45,0	1/1:1,27:28:78.27:1262,78,0	1/1:0,25:25:69.19:1080,69,0	1/1:1,23:24:60.20:980,60,0	1/1:0,25:25:60.20:980,60,0	1/1:1,12:13:27.09:441,27,0	1/1:3,24:27:54.18:882,54,0	1/1:2,20:22:60.18:954,60,0	1/1:0,23:23:65.91:1078,66,0	1/1:0,11:11:33.11:539,33,0
chr10	28180180	.	G	GGTTT	2326.81	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-8.133;DP=664;FS=0.000;HRun=0;HaplotypeScore=100.0091;InbreedingCoeff=0.9973;MQ=81.46;MQ0=0;MQRankSum=-2.707;QD=45.62;ReadPosRankSum=2.688;VQSLOD=4.3292;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:42.90:0,43,978	0/0:12,0:12:33.11:0,33,578	0/0:16,0:16:42.11:0,42,656	0/0:20,0:20:30.10:0,30,591	0/0:23,0:23:57.18:0,57,964	0/0:35,0:35:96.30:0,96,1624	0/0:16,0:16:39.12:0,39,657	0/0:35,0:35:84.25:0,84,1340	0/0:25,0:25:72.25:0,72,1261	0/0:30,0:30:87.29:0,87,1496	0/0:27,0:27:75.18:0,75,1193	0/0:21,0:21:60.19:0,60,996	0/0:33,0:33:87.26:0,87,1413	0/0:21,0:21:57.16:0,57,917	0/0:24,0:24:69.17:0,69,1146	0/0:16,0:16:48.15:0,48,811	1/1:3,29:33:63.22:1608,63,0	1/1:2,15:17:33.11:840,33,0	0/0:29,0:29:69.22:0,69,1158	0/0:44,0:44:99:0,117,2032	0/0:9,0:8:24.07:0,24,393	0/0:19,0:19:48.16:0,48,832	0/0:31,0:31:75.12:0,75,1212	0/0:19,0:19:42.14:0,42,731	0/0:22,0:22:66.22:0,66,1124	0/0:22,0:22:63.21:0,63,1071	0/0:30,0:30:84.29:0,84,1465	0/0:9,0:9:24.08:0,24,420
chr10	28180320	.	ATG	A	428.68	PASS	AB=0.846;AC=6;AF=0.107;AN=56;BaseQRankSum=7.720;DP=654;FS=0.000;HRun=0;HaplotypeScore=78.5473;InbreedingCoeff=0.2986;MQ=65.12;MQ0=4;MQRankSum=-1.572;QD=4.12;ReadPosRankSum=2.120;VQSLOD=2.0723;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:25,2:27:16.21:16,0,765	0/0:21,0:21:51.16:0,51,796	0/0:29,0:12:12.04:0,12,182	0/0:20,0:12:15.14:0,15,178	0/0:37,2:39:26.57:0,27,1421	0/1:26,3:29:36.93:37,0,941	0/0:14,0:14:42.02:0,42,618	0/0:34,0:35:46.01:0,46,859	0/0:24,1:25:29.82:0,30,948	0/0:32,1:33:41.86:0,42,1171	0/0:26,1:27:29.84:0,30,980	0/1:20,2:22:18.60:19,0,716	0/0:21,1:22:20.79:0,21,811	0/0:19,1:20:8.76:0,9,641	0/0:20,1:21:17.77:0,18,737	0/0:15,1:16:11.77:0,12,689	1/1:5,9:14:21:255,21,0	0/1:4,7:12:2.25:231,0,2	0/0:18,2:20:5.74:0,6,586	0/0:27,0:27:66.21:0,66,1041	0/0:19,0:19:42.14:0,42,678	0/0:27,2:29:5.49:0,5,1077	0/0:28,1:29:41.90:0,42,1151	0/0:14,0:14:38.74:0,39,628	0/0:22,0:22:51.17:0,51,815	0/0:30,0:30:41.83:0,42,1101	0/0:26,0:26:65.15:0,65,1059	0/0:12,0:12:36.10:0,36,554
chr10	28180364	.	AC	A	735.11	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.014;DP=622;FS=4.113;HRun=2;HaplotypeScore=64.8081;InbreedingCoeff=0.9996;MQ=79.06;MQ0=2;MQRankSum=-3.122;QD=28.27;ReadPosRankSum=-0.443;VQSLOD=3.0906;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:77.72:0,78,1123	0/0:16,0:16:45.15:0,45,675	0/0:19,0:17:48.16:0,48,708	0/0:21,0:18:50.64:0,51,748	0/0:32,0:32:96.33:0,96,1437	0/0:24,0:24:72.23:0,72,1058	0/0:15,0:15:45.13:0,45,635	0/0:37,0:37:99:0,108,1619	0/0:22,0:22:66.22:0,66,989	0/0:33,0:33:99:0,99,1440	0/0:24,0:24:72.24:0,72,1077	0/0:15,0:15:45.15:0,45,675	0/0:25,0:25:75.24:0,75,1105	0/0:20,0:20:60.20:0,60,898	0/0:21,0:21:63.21:0,63,942	0/0:17,0:17:51.17:0,51,764	1/1:1,14:15:33.11:428,33,0	1/1:0,11:11:33.11:428,33,0	0/0:19,0:19:54.18:0,54,808	0/0:30,0:30:87.27:0,87,1263	0/0:20,0:20:57.18:0,57,834	0/0:30,0:30:90.30:0,90,1349	0/0:26,0:26:78.26:0,78,1169	0/0:15,0:15:45.14:0,45,655	0/0:29,0:29:87.29:0,87,1302	0/0:21,0:21:63.21:0,63,945	0/0:25,0:25:75.22:0,75,1064	0/0:12,0:12:36.12:0,36,539
chr10	28181319	.	C	CGT	1778.39	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=-4.481;DP=635;FS=1.169;HRun=0;HaplotypeScore=83.8421;InbreedingCoeff=0.6693;MQ=68.08;MQ0=2;MQRankSum=0.031;QD=11.26;ReadPosRankSum=-3.049;VQSLOD=2.4612;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:25:26.86:27,0,316	0/0:13,0:13:24.07:0,24,272	0/1:25,0:20:17.62:18,0,39	0/0:23,0:18:2.33:0,2,92	0/0:35,0:41:68.19:0,68,663	0/0:29,0:31:56.81:0,57,597	0/0:16,0:16:8.10:0,8,284	1/1:22,13:35:45.02:567,45,0	0/0:21,0:21:44.96:0,45,491	0/0:33,0:35:27.10:0,27,563	0/0:27,0:27:51.13:0,51,569	0/0:22,0:22:39.11:0,39,441	0/0:24,0:24:39.09:0,39,432	0/0:20,0:22:44.79:0,45,471	0/0:24,0:26:56.99:0,57,627	0/0:21,0:21:36.10:0,36,409	1/1:9,0:7:1.88:19,2,0	0/1:8,0:8:0:0,0,0	0/0:16,0:15:14.14:0,14,156	0/0:25,0:25:45.11:0,45,500	0/0:16,0:17:29.87:0,30,290	0/0:23,0:25:53.81:0,54,573	0/0:20,0:22:44.79:0,45,471	0/0:23,0:24:50.98:0,51,559	0/0:23,0:25:44:0,44,444	1/1:9,13:23:33.10:482,33,0	1/1:7,18:28:45.13:650,45,0	1/1:1,4:5:12.04:184,12,0
chr10	28182095	.	A	AT	623.52	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.172;DP=509;FS=4.690;HRun=1;HaplotypeScore=52.6959;InbreedingCoeff=0.9853;MQ=89.77;MQ0=0;MQRankSum=-6.646;QD=31.18;ReadPosRankSum=0.373;VQSLOD=3.1382;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:57.17:0,57,726	0/0:7,0:7:18.06:0,18,234	0/0:20,0:20:60.19:0,60,758	0/0:20,0:20:60.18:0,60,715	0/0:24,0:24:69.22:0,69,883	0/0:21,0:21:63.20:0,63,818	0/0:13,0:13:36.10:0,36,453	0/0:29,0:29:84.24:0,84,1042	0/0:22,0:22:60.18:0,60,764	0/0:18,0:18:54.18:0,54,701	0/0:29,0:29:84.23:0,84,1048	0/0:18,0:18:54.18:0,54,700	0/0:17,0:17:51.16:0,51,656	0/0:19,0:19:57.18:0,57,737	0/0:22,0:22:63.19:0,63,803	0/0:15,0:15:45.15:0,45,584	1/1:2,10:12:33.03:461,33,0	1/1:1,7:8:20.99:283,21,0	0/0:14,0:14:36.12:0,36,467	0/0:22,0:22:57.18:0,57,740	0/0:12,0:12:36.12:0,36,467	0/0:13,0:13:39.12:0,39,495	0/0:14,0:14:39.11:0,39,492	0/0:24,0:24:72.22:0,72,920	0/0:19,0:19:57.15:0,57,710	0/0:27,0:27:81.26:0,81,1048	0/0:25,0:25:72.22:0,72,916	0/0:5,0:5:15.05:0,15,195
chr10	28182101	.	G	GA	622.77	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.766;DP=498;FS=4.983;HRun=0;HaplotypeScore=50.0721;InbreedingCoeff=0.9793;MQ=86.19;MQ0=0;MQRankSum=-6.786;QD=34.60;ReadPosRankSum=0.657;VQSLOD=2.9257;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:54.18:0,54,754	0/0:5,0:5:15.05:0,15,210	0/0:19,0:19:54.16:0,54,732	0/0:15,0:15:42.14:0,42,586	0/0:22,0:22:66.20:0,66,901	0/0:22,0:22:66.22:0,66,923	0/0:14,0:14:42.12:0,42,568	0/0:36,0:36:99:0,102,1348	0/0:20,0:20:60.18:0,60,821	0/0:16,0:16:48.16:0,48,670	0/0:27,0:27:78.26:0,78,1090	0/0:17,0:17:51.17:0,51,713	0/0:16,0:16:48.16:0,48,671	0/0:19,0:19:57.19:0,57,797	0/0:22,0:22:66.22:0,66,922	0/0:16,0:16:48.16:0,48,671	1/1:1,9:11:30.10:456,30,0	1/1:1,6:7:18.06:286,18,0	0/0:16,0:16:48.16:0,48,670	0/0:19,0:19:57.19:0,57,792	0/0:12,0:12:36.12:0,36,502	0/0:14,0:14:42.14:0,42,587	0/0:14,0:14:42.14:0,42,584	0/0:25,0:25:75.21:0,75,1010	0/0:16,0:16:48.16:0,48,671	0/0:29,0:29:87.28:0,87,1199	0/0:24,0:24:69.20:0,69,926	0/0:5,0:5:15.05:0,15,210
chr10	28184576	.	C	CT	666.78	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=-5.141;DP=554;FS=9.955;HRun=7;HaplotypeScore=54.0828;InbreedingCoeff=0.6520;MQ=71.48;MQ0=1;MQRankSum=0.020;QD=18.02;ReadPosRankSum=-1.093;VQSLOD=2.2672;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:42.02:0,42,391	0/0:6,0:6:15.02:0,15,145	0/1:12,0:10:2.87:3,0,20	0/0:9,0:9:6.61:0,7,50	0/0:43,0:43:99:0,123,1154	1/1:1,24:25:63.19:761,63,0	0/0:8,0:8:24.02:0,24,226	0/0:25,0:25:57.07:0,57,543	0/0:20,0:20:60.10:0,60,579	0/0:27,0:27:68.85:0,69,649	0/0:25,0:25:74.37:0,74,678	0/0:17,0:17:45.07:0,45,434	0/0:19,0:19:54.04:0,54,503	0/0:16,0:16:45.07:0,45,434	0/0:14,0:14:39.04:0,39,371	0/0:21,0:21:60.08:0,60,573	0/0:18,0:18:45.07:0,45,434	0/0:16,0:16:42.02:0,42,390	0/0:18,0:18:48.04:0,48,451	0/0:43,0:43:99:0,111,1051	0/0:20,0:20:51.07:0,51,488	0/0:24,0:24:60.03:0,60,568	0/0:25,0:25:71.33:0,71,673	0/0:3,0:3:9.01:0,9,87	0/0:11,0:12:32.54:0,33,298	0/0:24,0:24:66.09:0,66,630	0/0:37,0:37:99:0,102,961	0/0:9,0:9:21.03:0,21,203
chr10	28186518	.	T	TACACAC	5009.89	PASS	AC=48;AF=0.923;AN=52;BaseQRankSum=-1.765;DP=559;FS=0.000;HRun=0;HaplotypeScore=157.1932;InbreedingCoeff=0.3178;MQ=66.39;MQ0=7;MQRankSum=-0.212;QD=10.84;ReadPosRankSum=-1.671;VQSLOD=3.8403;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:24:5.95:57,6,0	1/1:7,0:7:12.04:266,12,0	./.	./.	0/0:18,0:29:0.88:0,1,2	1/1:14,5:20:8.80:198,9,0	1/1:25,0:24:16.19:299,16,0	1/1:22,0:21:21.78:256,22,0	1/1:12,0:17:6.02:106,6,0	1/1:23,0:22:15.92:189,16,0	1/1:16,2:19:3.01:96,3,0	1/1:20,0:19:14.67:324,15,0	1/1:15,0:14:6.45:89,6,0	1/1:18,0:17:9.03:232,9,0	1/1:14,6:23:12.04:326,12,0	1/1:15,5:22:11.78:280,12,0	0/0:12,0:15:3.01:0,3,42	1/1:10,0:9:1.25:3,1,0	1/1:18,0:18:9.03:179,9,0	1/1:23,7:35:15.05:414,15,0	1/1:14,0:13:6.02:137,6,0	1/1:8,9:18:6.02:134,6,0	1/1:16,6:23:2.31:95,2,0	1/1:18,5:26:11.85:322,12,0	1/1:12,3:15:3.01:96,3,0	1/1:16,0:20:14.15:407,14,0	1/1:18,0:17:12.04:254,12,0	1/1:4,1:8:15:253,15,0
chr10	28188588	.	C	CA	6707.39	PASS	AB=0.663;AC=44;AF=0.786;AN=56;BaseQRankSum=-5.617;DP=626;FS=1.856;HRun=13;HaplotypeScore=90.7323;InbreedingCoeff=-0.0754;MQ=79.46;MQ0=0;MQRankSum=-0.560;QD=11.01;ReadPosRankSum=-1.342;VQSLOD=4.2706;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:12,20:32:52.52:330,0,53	1/1:3,6:9:14.97:131,15,0	0/0:17,0:17:13.99:0,14,87	0/1:20,0:18:10.77:11,0,30	1/1:5,25:32:25.06:484,25,0	0/1:11,18:30:14.64:324,0,15	1/1:3,12:15:21.02:195,21,0	1/1:13,10:27:42.24:326,42,0	1/1:9,15:25:6.45:202,6,0	1/1:9,13:23:0.68:269,1,0	1/1:6,18:26:50.50:404,50,0	1/1:3,15:20:39.95:335,40,0	1/1:6,20:26:35.96:324,36,0	0/1:6,13:19:16.09:145,0,16	1/1:9,27:36:15.84:421,16,0	0/1:5,17:23:9.14:241,0,9	1/1:10,0:20:15.76:76,16,0	1/1:2,0:6:2.84:14,3,0	0/1:5,12:17:1.55:164,0,2	1/1:7,21:29:18.59:421,19,0	0/1:5,7:13:6.34:119,0,6	1/1:3,12:17:23.12:236,23,0	1/1:7,20:28:32.87:293,33,0	0/1:6,18:25:58.66:257,0,59	0/1:9,18:28:25.43:348,0,25	1/1:8,14:22:4.71:309,5,0	1/1:8,15:23:27.86:239,28,0	0/1:13,4:17:40.26:91,0,40
chr10	28190212	.	GTT	G	791.84	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.010;DP=591;FS=8.738;HRun=11;HaplotypeScore=71.7867;InbreedingCoeff=0.9722;MQ=71.28;MQ0=0;MQRankSum=-2.070;QD=20.30;ReadPosRankSum=1.512;VQSLOD=2.4529;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:14:38.61:0,39,541	0/0:7,0:7:21.07:0,21,323	0/0:10,0:10:18.04:0,18,252	0/0:9,0:9:12.03:0,12,150	0/0:28,2:30:17.38:0,17,1047	0/0:27,0:27:73.13:0,73,1109	0/0:11,0:12:29.57:0,30,401	0/0:28,0:29:59.68:0,60,860	0/0:23,0:23:54.18:0,54,808	0/0:26,0:28:71.72:0,72,1031	0/0:17,0:18:50.65:0,51,714	0/0:9,0:9:24.08:0,24,370	0/0:21,0:23:65.65:0,66,913	0/0:17,0:19:47.13:0,47,661	0/0:15,0:15:39.13:0,39,599	0/0:25,0:25:66.21:0,66,988	1/1:0,22:22:42.11:447,42,0	1/1:2,15:17:45.07:466,45,0	0/0:24,0:27:70.68:0,71,939	0/0:34,0:36:99:0,102,1534	0/0:19,0:21:51.10:0,51,706	0/0:30,0:31:74.74:0,75,1117	0/0:28,0:29:86.74:0,87,1220	0/0:12,0:13:38.62:0,39,562	0/0:16,0:18:50.62:0,51,721	0/0:26,0:26:63.21:0,63,969	0/0:39,0:40:99:0,111,1619	0/0:11,0:12:36.12:0,36,537
chr10	28192418	.	GAC	G	395.93	PASS	AB=0.913;AC=19;AF=0.352;AN=54;BaseQRankSum=5.643;DP=543;FS=0.000;HRun=0;HaplotypeScore=70.7178;InbreedingCoeff=-0.5120;MQ=64.74;MQ0=6;MQRankSum=-0.180;QD=1.11;ReadPosRankSum=-1.423;VQSLOD=1.0674;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:15.76:0,16,327	0/1:13,2:14:41.38:41,0,250	0/0:19,0:12:5.99:0,6,62	./.	0/1:22,1:21:11.79:12,0,424	0/1:22,0:22:31.31:31,0,404	0/1:14,2:16:15.58:16,0,201	0/1:28,1:29:15.63:16,0,166	0/1:19,1:20:28.22:28,0,429	0/1:14,1:16:37.47:37,0,242	0/1:13,4:16:97.82:98,0,210	0/1:11,2:13:3.45:3,0,380	0/1:16,2:18:22.15:22,0,543	0/1:12,3:15:64.80:65,0,375	0/1:17,1:19:2.71:3,0,499	0/0:19,2:21:5.48:0,5,479	0/1:24,0:23:22.13:22,0,53	0/0:9,0:8:11.82:0,12,77	0/0:17,0:17:10.35:0,10,305	0/0:29,2:31:26.48:0,26,760	0/0:11,0:16:17.91:0,18,162	0/1:12,1:14:5.46:5,0,296	0/1:20,3:23:61.25:61,0,369	0/0:22,0:22:57.09:0,57,816	0/1:17,1:18:3.56:4,0,371	0/1:23,0:23:23.57:24,0,306	0/1:25,2:27:31.27:31,0,371	0/1:2,1:3:24.64:25,0,82
chr10	28192454	.	AAC	A	224.95	PASS	AB=0.900;AC=3;AF=0.054;AN=56;BaseQRankSum=4.312;DP=619;FS=8.760;HRun=0;HaplotypeScore=80.3209;InbreedingCoeff=0.4089;MQ=56.54;MQ0=15;MQRankSum=-0.142;QD=6.82;ReadPosRankSum=-1.159;VQSLOD=2.0927;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:35:77.95:0,78,1069	0/0:13,0:12:28.73:0,29,445	0/0:34,0:12:30:0,30,396	0/0:27,0:11:26.85:0,27,325	0/0:28,0:25:52.10:0,52,974	0/0:21,0:21:35.53:0,36,758	0/0:17,0:17:39.86:0,40,577	0/0:24,0:23:68.12:0,68,1052	0/0:20,0:20:54.57:0,55,891	0/0:18,0:18:51.14:0,51,805	0/0:22,0:21:43.01:0,43,689	0/0:19,0:19:48.17:0,48,880	0/0:24,0:24:61.98:0,62,1094	0/0:18,0:18:51.71:0,52,764	0/0:19,0:19:57.04:0,57,887	0/0:23,0:23:69.02:0,69,1134	1/1:3,21:23:1.20:227,1,0	0/1:8,1:7:66.45:88,0,66	0/0:22,0:22:63.15:0,63,1048	0/0:31,0:31:89.88:0,90,1320	0/0:15,0:14:30.07:0,30,471	0/0:20,0:20:56.17:0,56,873	0/0:28,0:27:54.28:0,54,769	0/0:28,0:27:78.21:0,78,1298	0/0:20,0:20:49.27:0,49,782	0/0:24,0:24:66.08:0,66,1061	0/0:30,0:30:86.82:0,87,1291	0/0:5,0:5:14.92:0,15,218
chr10	28193633	.	C	CATAT	620.53	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-3.430;DP=522;FS=0.000;HRun=0;HaplotypeScore=82.1718;InbreedingCoeff=0.8442;MQ=69.65;MQ0=1;MQRankSum=0.736;QD=28.21;ReadPosRankSum=0.404;VQSLOD=3.0007;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:33.03:0,33,454	0/0:7,0:7:18.02:0,18,227	0/0:11,0:9:8.96:0,9,95	0/0:9,0:8:4.58:0,5,52	0/0:32,0:32:90.19:0,90,1369	0/0:17,0:17:42.12:0,42,680	0/0:12,0:12:27.03:0,27,356	0/0:33,0:33:87.19:0,87,1250	0/0:21,0:21:48.14:0,48,770	0/0:34,0:34:90.26:0,90,1391	0/0:25,0:25:63.16:0,63,986	0/0:18,0:18:42.09:0,42,625	0/0:15,0:15:36.05:0,36,490	0/0:23,0:23:63.12:0,63,916	0/0:19,0:19:42.09:0,42,650	0/0:27,0:27:75.18:0,75,1164	1/1:1,14:16:27.09:689,27,0	1/1:6,0:6:5.96:43,6,0	0/0:11,0:11:33.04:0,33,440	0/0:24,0:24:66.20:0,66,1094	0/0:8,0:8:21.04:0,21,310	0/0:16,0:16:36.11:0,36,597	0/0:18,0:18:51.13:0,51,803	0/0:10,0:10:27.03:0,27,411	0/0:34,0:34:93.26:0,93,1500	0/0:27,0:27:81.25:0,81,1338	0/0:20,0:20:54.11:0,54,793	0/0:15,0:15:42.07:0,42,645
chr10	28195339	.	T	TAA	632.39	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=1.710;DP=471;FS=0.887;HRun=6;HaplotypeScore=61.7145;InbreedingCoeff=0.9905;MQ=83.83;MQ0=0;MQRankSum=-6.228;QD=30.11;ReadPosRankSum=-1.817;VQSLOD=2.8629;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:45.14:0,45,549	0/0:8,0:8:24.04:0,24,277	0/0:14,0:14:24.06:0,24,284	0/0:18,0:17:30.46:0,30,383	0/0:27,0:27:52.18:0,52,770	0/0:21,0:21:63.19:0,63,756	0/0:12,0:12:33.09:0,33,391	0/0:26,0:26:66.20:0,66,805	0/0:17,0:17:39.10:0,39,463	0/0:12,0:12:27.07:0,27,329	0/0:27,0:27:54.16:0,54,658	0/0:17,0:17:51.11:0,51,584	0/0:19,0:19:57.15:0,57,669	0/0:19,0:19:51.13:0,51,597	0/0:18,0:18:45.12:0,45,537	0/0:19,0:19:54.15:0,54,646	1/1:4,9:13:24.08:405,24,0	1/1:2,6:8:24.03:348,24,0	0/0:22,0:22:36.05:0,36,612	0/0:21,0:21:51.10:0,51,593	0/0:8,0:8:24.08:0,24,293	0/0:16,0:16:48.14:0,48,573	0/0:8,0:8:21.05:0,21,244	0/0:13,0:13:36.10:0,36,427	0/0:17,0:17:51.15:0,51,610	0/0:25,0:25:66.16:0,66,789	0/0:21,0:21:60.18:0,60,732	0/0:8,0:8:24.08:0,24,292
chr10	28195355	.	T	TA	284.49	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=3.490;DP=483;FS=2.055;HRun=9;HaplotypeScore=49.6904;InbreedingCoeff=0.7932;MQ=78.08;MQ0=0;MQRankSum=-2.730;QD=11.85;ReadPosRankSum=-2.343;VQSLOD=2.1687;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:38.99:0,39,338	0/0:5,0:5:15:0,15,130	0/0:9,0:9:11.16:0,11,123	0/0:20,0:17:2.19:0,2,148	0/0:26,0:27:67.99:0,68,575	0/0:25,0:25:59.93:0,60,508	0/0:10,0:10:23.99:0,24,208	0/0:38,0:38:92.78:0,93,781	0/0:10,0:10:29.99:0,30,260	0/0:16,0:16:44.96:0,45,383	0/0:29,0:29:83.97:0,84,725	0/0:16,0:16:38.97:0,39,335	0/0:17,0:17:50.97:0,51,439	0/0:18,0:18:50.97:0,51,439	0/0:17,0:17:25.17:0,25,341	0/0:22,0:22:62.94:0,63,534	1/1:4,11:15:7.04:305,7,0	1/1:4,5:9:8.94:83,9,0	0/0:22,0:22:53.96:0,54,464	0/0:25,0:25:65.95:0,66,566	0/0:8,0:8:14.98:0,15,130	0/0:17,0:17:41.96:0,42,359	0/0:9,0:9:26.99:0,27,234	0/0:13,0:13:35.99:0,36,312	0/0:18,0:18:47.98:0,48,414	0/0:26,0:26:71.98:0,72,625	0/0:18,0:18:41.97:0,42,360	0/0:7,0:7:18:0,18,156
chr10	28196829	.	T	TAAAA	2785.34	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-7.608;DP=539;FS=1.410;HRun=1;HaplotypeScore=83.8243;InbreedingCoeff=0.9917;MQ=77.77;MQ0=0;MQRankSum=-3.714;QD=77.37;ReadPosRankSum=2.773;VQSLOD=4.0863;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:81.26:0,81,1644	0/0:10,0:10:27.09:0,27,566	0/0:14,0:14:42.13:0,42,843	0/0:10,0:10:20.90:0,21,341	0/0:41,0:41:99:0,120,2441	0/0:23,0:23:69.24:0,69,1447	0/0:13,0:13:39.11:0,39,699	0/0:29,0:29:84.27:0,84,1662	0/0:16,0:16:48.16:0,48,994	0/0:22,0:21:63.22:0,63,1308	0/0:26,0:26:78.27:0,78,1636	0/0:22,0:22:63.19:0,63,1233	0/0:20,0:20:60.19:0,60,1219	0/0:8,0:8:24.08:0,24,503	0/0:17,0:17:51.18:0,51,1070	0/0:16,0:16:48.15:0,48,954	1/1:0,20:21:60.21:1738,60,0	1/1:0,14:15:42.14:1169,42,0	0/0:24,0:24:72.24:0,72,1461	0/0:36,0:36:99:0,108,2138	0/0:12,0:12:33.11:0,33,692	0/0:11,0:11:33.11:0,33,692	0/0:23,0:23:69.23:0,69,1384	0/0:6,0:6:18.06:0,18,377	0/0:28,0:28:81.28:0,81,1685	0/0:13,0:13:39.13:0,39,818	0/0:25,0:25:75.22:0,75,1460	0/0:11,0:11:33.11:0,33,692
chr10	28198350	.	CT	C	167.28	PASS	AB=0.950;AC=6;AF=0.111;AN=54;BaseQRankSum=4.775;DP=172;FS=33.397;HRun=11;HaplotypeScore=17.8037;InbreedingCoeff=0.3394;MQ=73.49;MQ0=6;MQRankSum=-1.076;QD=4.40;ReadPosRankSum=2.701;VQSLOD=-0.4588;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:3,1:4:6.02:0,6,64	0/0:3,0:3:6.49:0,6,65	0/0:13,0:7:2.99:0,3,24	0/1:13,0:3:0.01:0,0,0	0/0:2,0:2:3.01:0,3,32	0/0:3,0:3:3.01:0,3,32	0/0:4,0:4:6.02:0,6,64	0/0:17,1:18:14.29:0,14,342	0/0:7,0:7:16.28:0,16,157	0/0:4,0:4:6.02:0,6,64	0/1:8,1:9:9.60:10,0,113	0/0:2,0:2:3.01:0,3,32	0/0:4,0:4:6.02:0,6,64	0/0:8,0:8:9.90:0,10,91	0/0:6,0:6:18.05:0,18,192	0/0:7,0:7:12.03:0,12,128	1/1:1,10:11:26.97:222,27,0	1/1:3,2:4:5.99:49,6,0	0/0:10,0:10:15.02:0,15,147	0/0:6,0:6:9.02:0,9,96	./.	0/0:5,0:6:14.87:0,15,142	0/0:3,0:3:6.02:0,6,64	0/0:4,0:4:12.03:0,12,128	0/0:5,0:5:6.02:0,6,64	0/0:4,0:4:9.02:0,9,96	0/0:4,0:4:6.02:0,6,64	0/0:3,0:3:6.02:0,6,64
chr10	28201590	.	AT	A	537.60	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.563;DP=564;FS=2.460;HRun=9;HaplotypeScore=61.0794;InbreedingCoeff=0.9686;MQ=82.40;MQ0=0;MQRankSum=0.063;QD=17.34;ReadPosRankSum=1.746;VQSLOD=3.8717;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:52,1:53:99:0,99,1380	0/0:8,0:8:21.06:0,21,242	0/0:26,0:26:36.67:0,37,546	0/0:12,0:12:30:0,30,321	0/0:21,0:22:56.99:0,57,628	0/0:19,0:19:51.11:0,51,574	0/0:29,0:29:87.22:0,87,989	0/0:22,0:22:51.10:0,51,547	0/0:22,0:22:66.20:0,66,762	0/0:15,0:15:42.12:0,42,485	0/0:18,0:18:45.03:0,45,477	0/0:23,0:23:63.11:0,63,698	0/0:13,0:13:36.11:0,36,415	0/0:30,0:30:75.22:0,75,865	0/0:17,0:18:44.96:0,45,491	0/0:18,0:18:51.15:0,51,588	1/1:2,15:17:45.02:412,45,0	1/1:4,10:14:27.01:247,27,0	0/0:24,0:24:45.13:0,45,516	0/0:13,1:14:11.13:0,11,330	0/0:23,0:25:65.85:0,66,712	0/0:12,0:12:30.09:0,30,346	0/0:14,1:15:14.59:0,15,395	0/0:18,0:18:51.14:0,51,579	0/0:18,0:18:39.08:0,39,429	0/0:22,1:23:26.67:0,27,547	0/0:22,0:22:63.17:0,63,716	0/0:14,0:14:39.07:0,39,418
chr10	28202106	.	CT	C	1066.75	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.999;DP=713;FS=1.412;HRun=4;HaplotypeScore=72.0947;InbreedingCoeff=0.9956;MQ=80.85;MQ0=0;MQRankSum=-2.235;QD=30.48;ReadPosRankSum=1.054;VQSLOD=3.9703;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,105,1470	0/0:7,0:7:21.07:0,21,294	0/0:22,0:22:54.56:0,55,661	0/0:19,0:19:32.75:0,33,373	0/0:20,0:20:54.17:0,54,739	0/0:12,0:12:36.12:0,36,504	0/0:25,0:25:72.20:0,72,957	0/0:46,0:46:99:0,135,1862	0/0:28,0:28:78.25:0,78,1075	0/0:23,0:23:66.21:0,66,910	0/0:22,0:22:66.21:0,66,908	0/0:34,0:34:99:0,99,1351	0/0:29,0:29:78.25:0,78,1074	0/0:30,0:30:90.27:0,90,1210	0/0:36,0:36:99:0,105,1455	0/0:33,0:33:99:0,99,1387	1/1:1,26:27:78.24:936,78,0	1/1:1,7:8:21.06:252,21,0	0/0:32,0:32:96.30:0,96,1313	0/0:19,0:19:57.19:0,57,798	0/0:56,0:56:99:0,159,2204	0/0:15,0:15:45.15:0,45,629	0/0:13,0:13:39.12:0,39,529	0/0:28,0:28:78.26:0,78,1092	0/0:17,0:17:51.17:0,51,713	0/0:26,0:26:69.22:0,69,949	0/0:33,0:32:99:0,99,1370	0/0:16,0:16:45.15:0,45,630
chr10	28202191	.	AATC	A	460.89	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.235;DP=684;FS=2.048;HRun=0;HaplotypeScore=104.3685;InbreedingCoeff=0.9649;MQ=71.52;MQ0=2;MQRankSum=-1.422;QD=12.80;ReadPosRankSum=-1.719;VQSLOD=3.3103;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:63.15:0,63,1105	0/0:15,0:15:42.14:0,42,789	0/0:26,0:23:51.10:0,51,762	0/0:9,0:9:26.66:0,27,427	0/0:23,0:23:69.21:0,69,1226	0/0:21,0:21:55.40:0,55,934	0/0:20,0:20:44.59:0,45,674	0/0:33,0:33:87.21:0,87,1288	0/0:26,0:26:75.22:0,75,1350	0/0:20,0:20:54.13:0,54,895	0/0:26,0:26:66.18:0,66,1160	0/0:44,0:44:99:0,120,2232	0/0:29,0:29:86.62:0,87,1530	0/0:33,0:33:87.20:0,87,1430	0/0:30,0:30:75.26:0,75,1453	0/0:24,0:24:60.18:0,60,1106	1/1:17,9:26:39.86:463,40,0	1/1:10,0:10:8.48:111,8,0	0/0:21,0:21:54.14:0,54,805	0/0:24,0:24:60.20:0,60,1146	0/0:44,0:44:99:0,114,1848	0/0:24,0:24:63.19:0,63,1082	0/0:17,0:17:45.14:0,45,827	0/0:20,0:20:45.15:0,45,889	0/0:21,0:21:51.16:0,51,968	0/0:25,0:25:69.20:0,69,1166	0/0:31,0:31:87.24:0,87,1488	0/0:16,0:16:48.15:0,48,954
chr10	28206201	.	TG	T	427.81	PASS	AB=0.943;AC=8;AF=0.143;AN=56;BaseQRankSum=5.846;DP=623;FS=6.048;HRun=10;HaplotypeScore=69.7985;InbreedingCoeff=0.3846;MQ=75.98;MQ0=0;MQRankSum=-0.098;QD=4.19;ReadPosRankSum=1.013;VQSLOD=0.5542;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:11,1:13:0.85:0,1,220	0/0:18,0:18:30.08:0,30,332	0/1:19,1:20:32:32,0,238	0/1:15,0:13:5.66:6,0,59	0/0:28,0:28:39.11:0,39,431	0/0:22,0:22:13.15:0,13,343	0/0:20,1:21:25.08:0,25,505	0/0:30,1:31:39.95:0,40,408	0/0:30,0:30:81.22:0,81,896	0/1:17,2:19:25.95:26,0,340	0/0:21,1:22:13.05:0,13,372	0/0:21,2:23:28.09:0,28,538	0/0:29,0:29:66.18:0,66,730	0/0:25,0:25:60.16:0,60,664	0/0:33,0:33:69.19:0,69,763	0/0:23,0:23:63.15:0,63,681	1/1:5,9:14:26.99:234,27,0	1/1:2,11:13:29.99:260,30,0	0/1:19,2:21:13.01:13,0,317	0/0:38,2:40:29.09:0,29,769	0/0:13,0:13:27.07:0,27,299	0/0:22,0:22:45.11:0,45,488	0/0:18,1:19:10.10:0,10,331	0/0:18,0:18:54.15:0,54,597	0/0:22,0:22:45.10:0,45,483	0/0:21,0:21:42.11:0,42,462	0/0:29,1:30:52.17:0,52,803	0/0:17,1:18:25.08:0,25,504
chr10	28208935	.	TA	T	742.93	PASS	AB=0.867;AC=6;AF=0.107;AN=56;BaseQRankSum=7.811;DP=565;FS=4.682;HRun=10;HaplotypeScore=54.2818;InbreedingCoeff=0.6302;MQ=72.82;MQ0=0;MQRankSum=-0.378;QD=11.09;ReadPosRankSum=0.857;VQSLOD=2.7398;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:24.02:0,24,252	0/0:9,0:9:24.06:0,24,266	0/1:10,1:11:5:5,0,173	0/0:8,1:11:18.70:0,19,154	0/0:31,0:31:57.66:0,58,808	0/0:30,1:31:55.11:0,55,822	0/0:7,0:7:18.03:0,18,189	0/0:39,0:39:93.25:0,93,1028	0/0:11,1:12:7.03:0,7,306	0/0:30,0:30:84.23:0,84,929	0/0:29,0:29:72.67:0,73,798	0/0:15,0:15:45.11:0,45,487	0/0:19,0:19:31.62:0,32,473	0/0:13,0:13:36.10:0,36,398	0/0:22,1:23:34:0,34,587	0/0:27,0:27:72.19:0,72,789	1/1:1,21:22:59.99:521,60,0	1/1:3,13:16:35.99:312,36,0	0/0:19,1:20:28.10:0,28,538	0/0:34,0:34:93.24:0,93,1019	0/0:16,0:16:42.11:0,42,465	0/0:20,0:20:51.10:0,51,551	0/0:17,1:18:22.08:0,22,472	0/0:11,0:11:27.07:0,27,299	0/0:33,2:35:55.08:0,55,813	0/1:14,4:18:37.01:37,0,404	0/0:23,0:23:60.13:0,60,644	0/0:16,0:16:48.13:0,48,531
chr10	28214868	.	T	TA	986.31	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-7.489;DP=582;FS=0.000;HRun=8;HaplotypeScore=52.8140;InbreedingCoeff=0.9558;MQ=75.44;MQ0=0;MQRankSum=0.084;QD=24.66;ReadPosRankSum=1.586;VQSLOD=4.2744;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:66.03:0,66,604	0/0:17,0:17:45.02:0,45,412	0/0:13,0:11:14.96:0,15,132	0/0:17,0:14:9.22:0,9,153	0/0:17,0:17:48.01:0,48,434	0/0:24,0:24:60.03:0,60,549	0/0:16,0:16:45.01:0,45,407	0/0:28,0:28:75:0,75,676	0/0:23,0:23:57:0,57,517	0/0:29,0:29:71.96:0,72,645	0/0:27,0:27:78.03:0,78,709	0/0:17,0:17:45.02:0,45,412	0/0:27,0:27:69.02:0,69,626	0/0:24,0:24:66.02:0,66,601	0/0:23,0:23:66.04:0,66,604	0/0:19,0:19:45.02:0,45,412	1/1:2,20:22:54.16:623,54,0	1/1:1,17:18:42.12:485,42,0	0/0:21,0:21:54.01:0,54,488	0/0:16,0:16:39:0,39,353	0/0:19,0:19:50.97:0,51,454	0/0:13,0:13:39.02:0,39,357	0/0:25,0:25:66.02:0,66,600	0/0:17,0:17:44.98:0,45,401	0/0:24,0:24:63.03:0,63,577	0/0:26,0:25:72.04:0,72,659	0/0:30,0:30:87.05:0,87,796	0/0:6,0:6:14.80:0,15,137
chr10	28214939	.	C	CTTCA	22579.43	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-7.439;DP=681;FS=7.521;HRun=0;HaplotypeScore=89.8383;InbreedingCoeff=0.8767;MQ=75.61;MQ0=8;MQRankSum=2.706;QD=36.95;ReadPosRankSum=0.562;VQSLOD=4.5541;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,21:27:48.16:1144,48,0	1/1:1,8:8:18.06:420,18,0	0/0:20,0:16:6.02:0,6,88	0/0:21,0:20:9.02:0,9,126	1/1:9,19:28:54.19:1283,54,0	1/1:10,12:23:15.05:358,15,0	1/1:8,7:15:15.05:358,15,0	1/1:23,1:26:15.04:287,15,0	1/1:4,9:12:27.09:643,27,0	1/1:12,13:26:42.14:930,42,0	1/1:11,17:30:42.14:977,42,0	1/1:7,16:23:45.15:1073,45,0	1/1:11,18:30:9.71:1210,10,0	1/1:12,15:28:42.14:1000,42,0	1/1:10,27:35:54.18:1287,54,0	1/1:6,15:21:39.13:930,39,0	0/0:6,0:18:38.97:0,39,353	0/0:8,0:11:4.11:0,4,31	1/1:17,14:29:44.28:1006,44,0	1/1:10,21:31:57.20:1359,57,0	1/1:8,19:27:45.15:1073,45,0	1/1:10,14:25:36.12:784,36,0	1/1:13,13:26:33.10:784,33,0	1/1:5,16:20:39.13:930,39,0	1/1:10,21:30:48.16:1145,48,0	1/1:9,25:34:75.26:1743,75,0	1/1:14,22:36:60.21:1427,60,0	1/1:2,6:8:18.06:429,18,0
chr10	28215695	.	CA	C	857.90	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.601;DP=762;FS=3.166;HRun=7;HaplotypeScore=71.7134;InbreedingCoeff=0.9686;MQ=79.93;MQ0=0;MQRankSum=-3.664;QD=23.19;ReadPosRankSum=1.834;VQSLOD=3.8989;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,111,1382	0/0:13,0:13:36.11:0,36,450	0/0:23,0:23:57.13:0,57,679	0/0:16,0:15:36.07:0,36,419	0/0:43,0:43:99:0,120,1508	0/0:24,0:24:69.21:0,69,855	0/0:17,0:17:48.14:0,48,587	0/0:32,0:32:93.29:0,93,1152	0/0:38,0:38:99:0,102,1268	0/0:31,0:31:81.25:0,81,1007	0/0:25,0:26:75.06:0,75,896	0/0:29,0:29:81.26:0,81,1017	0/0:35,0:35:96.31:0,96,1204	0/0:31,0:32:85.43:0,85,1124	0/0:36,0:36:96.31:0,96,1203	0/0:35,0:35:99:0,102,1272	1/1:3,26:29:75.16:765,75,0	1/1:1,7:7:21.05:214,21,0	0/0:20,0:20:60.16:0,60,724	0/0:34,0:34:99:0,99,1244	0/0:32,0:31:90.24:0,90,1110	0/0:25,0:25:72.23:0,72,899	0/0:26,0:26:78.25:0,78,978	0/0:39,0:39:99:0,111,1389	0/0:23,0:23:63.19:0,63,777	0/0:22,0:22:63.20:0,63,789	0/0:28,0:28:75.22:0,75,910	0/0:3,0:3:9.03:0,9,113
chr10	28218780	.	T	TAC	846.79	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=4.682;DP=320;FS=3.688;HRun=0;HaplotypeScore=39.0680;InbreedingCoeff=0.7266;MQ=71.21;MQ0=3;MQRankSum=-4.980;QD=47.04;ReadPosRankSum=-0.530;VQSLOD=4.1970;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:36.05:0,36,519	0/0:3,0:3:9.03:0,9,138	0/0:8,0:4:3.47:0,3,27	0/0:13,0:9:2.43:0,2,22	0/0:13,0:13:9.98:0,10,478	0/0:19,0:19:57.18:0,57,838	0/0:7,0:7:21.02:0,21,291	0/0:45,0:45:99:0,126,1697	0/0:9,0:9:27.09:0,27,404	0/0:19,0:19:57.17:0,57,816	0/0:2,0:2:6.02:0,6,92	0/0:9,0:9:24.05:0,24,323	0/0:9,0:9:27.09:0,27,412	0/0:9,0:9:24.07:0,24,346	0/0:7,0:7:18.06:0,18,266	0/0:8,0:8:24.08:0,24,365	1/1:0,8:8:24.08:449,24,0	1/1:0,10:10:27.09:518,27,0	0/0:16,0:16:45.11:0,45,608	0/0:10,0:10:30.09:0,30,438	0/0:7,0:7:21.04:0,21,277	0/0:3,0:3:9:0,9,96	0/0:6,0:6:18.02:0,18,211	0/0:4,0:4:12.04:0,12,183	0/0:14,0:14:42.14:0,42,642	0/0:21,0:21:63.21:0,63,963	0/0:14,0:14:36.11:0,36,527	0/0:14,0:14:39.13:0,39,596
chr10	28222786	.	A	AT	1291.45	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-7.897;DP=681;FS=2.946;HRun=7;HaplotypeScore=64.4609;InbreedingCoeff=0.9838;MQ=79.44;MQ0=0;MQRankSum=-0.961;QD=26.91;ReadPosRankSum=3.201;VQSLOD=4.5479;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:81.13:0,81,782	0/0:11,0:11:32.99:0,33,299	0/0:18,0:18:32.95:0,33,296	0/0:14,1:16:11.97:0,12,107	0/0:35,0:35:90.14:0,90,869	0/0:33,0:33:96.15:0,96,927	0/0:22,0:22:54.08:0,54,521	0/0:38,0:38:90.08:0,90,847	0/0:18,0:18:51.07:0,51,487	0/0:28,0:28:81.13:0,81,782	0/0:23,0:23:57.06:0,57,539	0/0:19,0:19:54.08:0,54,522	0/0:21,0:21:60.09:0,60,579	0/0:27,0:27:75.11:0,75,720	0/0:33,0:33:96.09:0,96,904	0/0:19,0:19:48.08:0,48,464	1/1:3,22:25:66.20:797,66,0	1/1:4,19:23:51.16:616,51,0	0/0:21,0:21:57.08:0,57,546	0/0:35,0:35:93.14:0,93,898	0/0:16,0:16:39.06:0,39,376	0/0:39,0:39:99:0,114,1095	0/0:23,0:23:66.11:0,66,637	0/0:18,0:18:39.04:0,39,370	0/0:18,0:18:48.07:0,48,464	0/0:24,0:24:66.09:0,66,633	0/0:32,0:32:78.06:0,78,735	0/0:17,0:17:41.99:0,42,388
chr10	28222934	.	T	TCG	2749.44	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=11.211;DP=555;FS=0.547;HRun=0;HaplotypeScore=76.1313;InbreedingCoeff=0.9697;MQ=91.34;MQ0=0;MQRankSum=-2.981;QD=47.40;ReadPosRankSum=4.322;VQSLOD=4.7097;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:78.25:0,78,1172	0/0:9,0:9:27.08:0,27,392	0/0:28,0:28:81.27:0,81,1180	0/0:20,0:20:54.18:0,54,781	0/0:12,0:12:36.12:0,36,550	0/0:24,0:24:72.23:0,72,1071	0/0:24,0:24:72.24:0,72,1096	0/0:22,0:22:63.21:0,63,946	0/0:23,0:23:66.21:0,66,991	0/0:14,0:14:39.13:0,39,592	0/0:7,0:7:21.06:0,21,301	0/0:27,0:27:81.23:0,81,1195	0/0:25,0:25:75.25:0,75,1148	0/0:21,0:21:63.20:0,63,941	0/0:26,0:26:78.26:0,78,1195	0/0:25,0:25:72.23:0,72,1082	1/1:1,39:40:99:1961,102,0	1/1:1,17:18:48.16:910,48,0	0/0:20,0:20:60.20:0,60,910	0/0:7,0:7:18.06:0,18,276	0/0:26,0:26:78.26:0,78,1191	0/0:5,0:5:15.05:0,15,229	0/0:12,0:12:30.10:0,30,459	0/0:32,0:31:93.30:0,93,1402	0/0:21,0:21:60.20:0,60,917	0/0:17,0:17:45.15:0,45,689	0/0:19,0:19:57.19:0,57,871	0/0:4,0:4:12.04:0,12,184
chr10	28223523	.	TTG	T	51.84	PASS	AB=0.948;AC=8;AF=0.143;AN=56;BaseQRankSum=7.358;DP=902;FS=0.000;HRun=0;HaplotypeScore=109.9686;InbreedingCoeff=0.1393;MQ=69.91;MQ0=11;MQRankSum=-0.101;QD=0.27;ReadPosRankSum=1.396;VQSLOD=1.5769;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:35,2:36:1.32:1,0,808	0/0:11,0:11:21.07:0,21,327	0/0:45,0:27:0.04:0,0,106	0/0:47,0:22:19.57:0,20,183	0/0:22,1:24:26.25:0,26,797	0/0:30,3:33:27.60:0,28,815	0/0:38,0:38:36.51:0,37,954	0/0:41,1:41:21.96:0,22,722	0/0:31,1:32:34.05:0,34,934	0/1:39,3:42:35.59:36,0,867	0/0:24,1:25:27.85:0,28,758	0/0:34,0:34:78.05:0,78,1186	0/0:30,0:30:34.93:0,35,954	0/0:32,2:34:39.97:0,40,1012	0/0:34,1:35:37.07:0,37,1046	0/0:45,3:48:53.04:0,53,1701	1/1:18,0:18:16.79:77,17,0	0/1:7,0:7:7.03:7,0,18	0/0:30,0:29:24.75:0,25,246	0/1:24,4:28:27.06:27,0,714	0/0:62,1:65:41.25:0,41,1845	0/1:25,2:27:4.96:5,0,743	0/0:25,0:25:49.72:0,50,740	0/0:33,1:34:42.87:0,43,1099	0/0:26,0:26:59.08:0,59,890	0/1:34,0:34:26.96:27,0,827	0/0:39,0:36:69.31:0,69,961	0/0:12,0:11:18.02:0,18,241
chr10	28223541	.	GTGTGTGTA	G	464.23	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=4.120;DP=915;FS=0.000;HRun=0;HaplotypeScore=215.4284;InbreedingCoeff=0.8293;MQ=55.81;MQ0=17;MQRankSum=-5.089;QD=22.11;ReadPosRankSum=0.072;VQSLOD=2.7221;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:38:96.18:0,96,2575	0/0:10,0:10:24.07:0,24,930	0/0:51,0:16:4.44:0,4,443	0/0:59,0:17:32.84:0,33,548	0/0:24,0:24:68.95:0,69,2495	0/0:28,0:28:75.21:0,75,2496	0/0:37,0:37:87.13:0,87,2859	0/0:41,0:40:93.16:0,93,2149	0/0:31,0:31:78.23:0,78,2637	0/0:36,0:36:83.29:0,83,2724	0/0:25,0:25:72.22:0,72,2290	0/0:35,0:35:95.53:0,96,3359	0/0:31,0:31:87.22:0,87,2616	0/0:37,0:37:98.27:0,98,3035	0/0:38,0:38:99:0,102,3201	0/0:48,0:48:99:0,132,4724	1/1:3,11:14:17.99:489,18,0	1/1:3,4:7:3.01:82,3,0	0/0:22,0:21:44.69:0,45,1015	0/0:29,0:29:75.19:0,75,2269	0/0:67,0:67:99:0,180,5331	0/0:31,0:31:78.18:0,78,2494	0/0:25,0:25:62.55:0,63,2167	0/0:40,0:40:99:0,105,3083	0/0:27,0:27:69.17:0,69,2305	0/0:37,0:37:67.03:0,67,2640	0/0:33,0:30:88.90:0,89,2580	0/0:12,0:11:22.85:0,23,624
chr10	28223630	.	TATATAC	T	327.57	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=3.653;DP=798;FS=9.939;HRun=0;HaplotypeScore=170.0514;InbreedingCoeff=0.8920;MQ=70.73;MQ0=0;MQRankSum=-4.143;QD=36.40;ReadPosRankSum=1.159;VQSLOD=2.9103;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:75.24:0,75,2475	0/0:8,0:8:24.08:0,24,804	0/0:26,0:24:57.12:0,57,1444	0/0:33,0:30:73.98:0,74,2006	0/0:19,0:19:54.19:0,54,1912	0/0:32,0:32:93.32:0,93,3216	0/0:39,0:39:99:0,111,3736	0/0:37,0:37:99:0,108,3552	0/0:28,0:28:84.27:0,84,2910	0/0:26,0:26:78.27:0,78,2794	0/0:19,0:19:57.20:0,57,2017	0/0:36,0:36:99:0,102,3654	0/0:35,0:35:99:0,99,3460	0/0:31,0:31:90.28:0,90,3045	0/0:40,0:40:99:0,117,4125	0/0:35,0:35:99:0,105,3668	1/1:0,7:7:15.05:360,15,0	1/1:1,1:2:3.01:72,3,0	0/0:23,0:23:63.21:0,63,2152	0/0:30,0:30:87.26:0,87,2828	0/0:59,0:59:99:0,172,5859	0/0:27,0:27:81.28:0,81,2788	0/0:33,0:33:96.33:0,96,3426	0/0:29,0:29:78.21:0,78,2515	0/0:30,0:30:90.31:0,90,3114	0/0:34,0:34:99:0,102,3529	0/0:36,0:35:99:0,108,3525	0/0:14,0:14:42.14:0,42,1513
chr10	28224498	.	GCA	G	3675.79	PASS	AB=1.000;AC=43;AF=0.827;AN=52;BaseQRankSum=-0.034;DP=510;FS=2.472;HRun=0;HaplotypeScore=77.8049;InbreedingCoeff=0.4405;MQ=67.97;MQ0=12;MQRankSum=2.436;QD=9.52;ReadPosRankSum=3.404;VQSLOD=3.3443;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:25:6.03:243,0,6	0/1:8,0:8:9:60,0,9	0/0:32,0:21:14.97:0,15,123	0/0:34,0:22:14.62:0,15,95	0/0:26,0:26:2.99:0,3,24	1/1:29,0:29:29.96:246,30,0	1/1:20,0:18:29.92:241,30,0	1/1:26,0:23:44.84:363,45,0	1/1:10,0:10:20.73:149,21,0	1/1:20,0:20:29.98:264,30,0	./.	0/1:16,0:16:3.21:20,0,3	1/1:9,0:9:16.50:122,17,0	1/1:16,0:16:20.85:158,21,0	1/1:19,0:18:31.67:292,32,0	1/1:21,0:21:5.79:52,6,0	1/1:5,0:5:2.75:18,3,0	1/1:5,0:5:5.94:41,6,0	1/1:26,0:24:29.87:227,30,0	1/1:8,10:18:2.94:18,3,0	1/1:21,0:19:14.79:106,15,0	1/1:24,0:24:38.94:317,39,0	./.	1/1:20,0:19:9:78,9,0	1/1:14,0:14:17.97:146,18,0	1/1:13,0:13:35.81:293,36,0	1/1:15,0:14:26.82:200,27,0	1/1:6,0:5:2.67:23,3,0
chr10	28224523	.	CACAG	C	6058.36	PASS	AB=1.000;AC=48;AF=0.857;AN=56;BaseQRankSum=-1.474;DP=540;FS=19.047;HRun=0;HaplotypeScore=91.7787;InbreedingCoeff=0.5267;MQ=52.21;MQ0=16;MQRankSum=1.887;QD=12.34;ReadPosRankSum=2.269;VQSLOD=2.9753;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:49,0:49:50.74:692,51,0	0/1:8,0:8:3.01:103,0,3	0/0:10,0:5:14.97:0,15,123	0/0:17,0:6:14.62:0,15,95	0/0:7,0:22:2.99:0,3,24	1/1:23,0:23:32.42:275,32,0	1/1:19,0:17:35.87:290,36,0	1/1:31,0:29:47.56:381,48,0	1/1:16,0:16:38.70:350,39,0	1/1:22,0:21:56.65:463,57,0	1/1:18,0:18:23.66:174,24,0	1/1:11,0:26:8.19:114,8,0	1/1:13,0:13:28.08:215,28,0	1/1:16,0:16:29.82:229,30,0	1/1:26,0:25:53.54:393,54,0	1/1:4,25:28:11.46:151,11,0	1/1:6,0:6:2.51:19,3,0	1/1:4,0:4:5.94:41,6,0	1/1:5,13:16:38.77:298,39,0	1/1:21,0:21:20.80:148,21,0	1/1:19,0:15:23.75:175,24,0	1/1:23,0:23:38.94:317,39,0	1/1:15,0:15:8.96:69,9,0	1/1:5,19:23:9.03:176,9,0	0/1:15,0:15:41.93:156,0,42	1/1:25,1:26:53.70:490,54,0	1/1:19,0:18:38.77:323,39,0	1/1:5,0:3:1.46:21,1,0
chr10	28224525	.	CAGAG	C	1314.08	PASS	AB=0.948;AC=29;AF=0.580;AN=50;BaseQRankSum=-1.530;DP=538;FS=25.744;HRun=0;HaplotypeScore=108.1084;InbreedingCoeff=0.2507;MQ=52.10;MQ0=17;MQRankSum=2.985;QD=3.49;ReadPosRankSum=2.744;VQSLOD=0.4544;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:49,0:49:21.16:242,21,0	1/1:8,0:8:3.99:15,4,0	./.	./.	0/0:21,0:21:0:0,0,0	1/1:17,0:23:5.22:74,5,0	0/0:17,0:15:0.29:0,0,0	0/0:31,0:28:6.82:0,7,42	1/1:15,0:16:6.53:60,7,0	0/1:17,7:23:4.08:160,0,4	1/1:18,0:18:8.29:89,8,0	0/1:26,0:26:8.84:30,0,9	0/1:12,0:12:5.78:44,0,6	0/0:16,0:16:0.33:0,0,2	0/1:26,1:26:2.67:10,0,3	1/1:29,0:28:1.89:60,2,0	0/0:7,0:7:0:0,0,0	./.	0/1:18,0:16:8.73:9,0,14	1/1:21,0:21:11.98:111,12,0	1/1:19,0:15:7.07:48,7,0	0/0:21,0:20:0.89:0,1,2	1/1:15,0:15:3.29:43,3,0	1/1:24,0:23:9.03:105,9,0	0/0:16,0:16:9.14:0,9,150	1/1:27,0:27:9.73:176,10,0	1/1:19,0:19:2.35:166,2,0	0/0:6,0:4:3.40:0,3,18
chr10	28225303	.	C	CATTAAGAT	1431.14	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-1.154;DP=679;FS=6.050;HRun=0;HaplotypeScore=164.3841;InbreedingCoeff=0.9823;MQ=81.74;MQ0=0;MQRankSum=-5.873;QD=79.51;ReadPosRankSum=0.645;VQSLOD=3.7941;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:75.26:0,75,2134	0/0:12,0:12:36.07:0,36,906	0/0:16,0:16:42.10:0,42,900	0/0:20,0:20:47.15:0,47,1130	0/0:36,0:36:96.33:0,96,2731	0/0:18,0:18:54.19:0,54,1449	0/0:17,0:17:48.16:0,48,1337	0/0:33,0:33:96.31:0,96,2554	0/0:29,0:29:87.30:0,87,2455	0/0:30,0:30:87.30:0,87,2286	0/0:34,0:34:99:0,102,2810	0/0:24,0:24:69.21:0,69,1838	0/0:23,0:23:69.24:0,69,1940	0/0:24,0:24:69.24:0,69,1940	0/0:30,0:30:90.31:0,90,2485	0/0:34,0:34:99:0,102,2850	1/1:4,6:14:24.08:1011,24,0	1/1:1,3:4:12.04:536,12,0	0/0:11,0:11:33.11:0,33,927	0/0:36,0:36:99:0,108,2917	0/0:32,0:32:96.33:0,96,2710	0/0:22,0:22:66.23:0,66,1893	0/0:34,0:34:99:0,99,2782	0/0:11,0:11:30.10:0,30,860	0/0:33,0:33:93.26:0,93,2424	0/0:33,0:33:93.32:0,93,2652	0/0:28,0:28:81.28:0,81,2295	0/0:14,0:14:39.13:0,39,1035
chr10	28225990	.	T	TA	744.09	PASS	AB=0.958;AC=6;AF=0.107;AN=56;BaseQRankSum=-0.726;DP=605;FS=0.000;HRun=9;HaplotypeScore=57.8703;InbreedingCoeff=0.7266;MQ=76.59;MQ0=0;MQRankSum=-1.164;QD=13.05;ReadPosRankSum=-0.978;VQSLOD=2.9018;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:73.97:0,74,625	0/0:11,0:11:26.99:0,27,234	0/1:11,0:11:5.28:5,0,87	0/0:14,0:14:22.99:0,23,182	0/0:32,0:32:86.95:0,87,752	0/0:20,0:20:53.98:0,54,469	0/1:10,1:11:0.19:0,0,227	0/0:49,0:49:99:0,111,958	0/0:11,0:11:29.99:0,30,260	0/0:26,0:26:74.98:0,75,651	0/0:30,0:30:77.94:0,78,673	0/0:14,0:14:38.99:0,39,339	0/0:23,0:23:39.41:0,39,493	0/0:20,0:20:56.97:0,57,491	0/0:31,0:32:89:0,89,759	0/0:24,0:24:62.84:0,63,533	1/1:2,20:22:54.15:597,54,0	1/1:2,11:13:24.06:265,24,0	0/0:10,0:10:29.99:0,30,260	0/0:33,0:33:89.95:0,90,778	0/0:11,0:11:29.98:0,30,260	0/0:23,0:23:59.98:0,60,521	0/0:29,0:29:80.95:0,81,696	0/0:13,0:13:38.95:0,39,331	0/0:29,0:29:83.92:0,84,717	0/0:22,1:23:29.79:0,30,485	0/0:35,0:35:98.97:0,99,859	0/0:6,0:6:18:0,18,156
chr10	28228931	.	C	CTA	611.55	PASS	AB=1.000;AC=6;AF=0.167;AN=36;BaseQRankSum=-5.384;DP=152;FS=52.228;HRun=0;HaplotypeScore=57.3838;InbreedingCoeff=0.3476;MQ=84.80;MQ0=1;MQRankSum=4.274;QD=7.64;ReadPosRankSum=1.974;VQSLOD=1.3337;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	0/0:1,0:1:2.80:0,3,13	./.	0/1:26,0:11:33.67:34,0,44	0/0:5,0:5:8.09:0,8,35	0/0:11,0:11:25.18:0,25,114	0/0:1,0:1:2.80:0,3,13	0/1:24,0:24:54.65:55,0,66	./.	./.	0/0:3,0:3:2.80:0,3,13	./.	0/0:5,0:5:13.99:0,14,64	./.	0/0:3,0:3:8.39:0,8,38	0/0:6,0:6:11.19:0,11,51	1/1:4,12:15:20:344,20,0	1/1:7,7:14:18.06:297,18,0	0/0:6,0:6:8.39:0,8,38	0/0:4,0:4:8.39:0,8,38	./.	0/0:1,0:1:2.80:0,3,13	./.	./.	0/0:5,0:5:8.39:0,8,38	./.	0/0:7,0:7:14.08:0,14,66	0/0:4,0:4:11.19:0,11,51
chr10	28228939	.	ATATAT	A	3706.81	PASS	AB=1.000;AC=32;AF=0.842;AN=38;BaseQRankSum=-4.459;DP=171;FS=41.835;HRun=0;HaplotypeScore=58.9805;InbreedingCoeff=0.4890;MQ=82.45;MQ0=4;MQRankSum=-4.923;QD=26.10;ReadPosRankSum=-1.454;VQSLOD=1.4538;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	1/1:0,1:1:3.01:62,3,0	0/1:16,0:6:0:0,0,0	0/1:38,0:14:8.29:8,0,159	1/1:2,3:5:9.03:186,9,0	1/1:1,10:11:27.09:559,27,0	1/1:0,1:1:3.01:62,3,0	1/1:5,21:26:54.13:806,54,0	./.	./.	1/1:2,2:4:3.01:62,3,0	./.	1/1:0,5:5:15.05:310,15,0	./.	1/1:0,3:3:9.03:186,9,0	1/1:1,5:6:12.04:248,12,0	0/0:16,0:14:27.09:0,27,602	0/0:11,0:11:18.06:0,18,404	1/1:1,3:4:9.03:186,9,0	1/1:1,3:4:9.03:186,9,0	./.	1/1:0,1:1:3.01:62,3,0	./.	./.	1/1:2,4:6:9.03:186,9,0	./.	1/1:2,5:7:18.06:347,18,0	1/1:0,4:4:12.04:248,12,0
chr10	28229023	.	T	TA	4137.10	PASS	AB=0.563;AC=46;AF=0.920;AN=50;BaseQRankSum=-2.486;DP=196;FS=2.272;HRun=1;HaplotypeScore=82.1463;InbreedingCoeff=0.0955;MQ=49.35;MQ0=6;MQRankSum=1.849;QD=23.78;ReadPosRankSum=3.208;VQSLOD=3.8942;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:1,6:8:21.49:44,0,21	1/1:0,3:4:6.02:89,6,0	0/0:6,0:2:6.02:0,6,73	./.	1/1:3,12:15:13.28:178,13,0	./.	1/1:0,4:4:9.03:142,9,0	1/1:1,17:15:42.06:607,42,0	1/1:0,5:5:3:32,3,0	1/1:1,3:4:10.28:145,10,0	1/1:0,13:13:18.06:284,18,0	1/1:0,7:7:12.03:170,12,0	1/1:1,1:2:6.02:74,6,0	1/1:1,6:7:9.03:140,9,0	1/1:0,3:3:3.01:47,3,0	1/1:0,3:3:3.01:46,3,0	1/1:2,4:5:5.04:93,5,0	0/1:1,4:5:15.62:172,0,16	1/1:1,7:8:4.57:295,5,0	1/1:0,10:10:21.06:316,21,0	1/1:0,3:3:3.01:48,3,0	1/1:0,2:2:3.01:32,3,0	1/1:0,8:8:12:189,12,0	./.	1/1:6,8:13:6.39:82,6,0	1/1:0,10:13:35.99:509,36,0	1/1:3,6:9:20.57:262,21,0	1/1:0,3:3:9.03:142,9,0
chr10	28229077	.	ATATG	A	8357.23	PASS	AB=0.500;AC=43;AF=0.827;AN=52;BaseQRankSum=-3.028;DP=334;FS=21.561;HRun=0;HaplotypeScore=94.7448;InbreedingCoeff=0.8215;MQ=74.12;MQ0=9;MQRankSum=-2.426;QD=32.90;ReadPosRankSum=1.537;VQSLOD=2.9299;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,0:8:5.76:78,6,0	1/1:2,1:3:9.03:126,9,0	0/0:12,0:10:6.09:0,6,396	0/0:30,0:18:25.86:0,26,567	1/1:10,0:10:21.07:342,21,0	1/1:19,0:19:27.09:408,27,0	1/1:6,0:6:14.89:250,15,0	1/1:5,42:47:99:1771,123,0	1/1:7,0:7:18.06:247,18,0	1/1:12,0:12:33.11:574,33,0	./.	1/1:3,0:3:6.02:84,6,0	1/1:14,0:14:30.10:462,30,0	1/1:6,1:7:16.87:251,17,0	1/1:7,0:7:12.04:198,12,0	1/1:9,0:9:18.06:300,18,0	0/0:9,0:8:14.84:0,15,244	0/0:11,0:11:30.10:0,30,481	1/1:20,0:19:49.34:722,49,0	./.	1/1:9,0:9:18.06:292,18,0	1/1:10,0:10:24.08:379,24,0	0/1:0,6:6:0.18:0,0,0	1/1:10,0:10:11.74:194,12,0	1/1:17,0:16:26.94:449,27,0	1/1:9,0:9:27.03:407,27,0	1/1:17,0:17:42.14:639,42,0	1/1:4,0:4:12.04:183,12,0
chr10	28230779	.	CACAT	C	640.36	PASS	AB=0.959;AC=13;AF=0.342;AN=38;BaseQRankSum=-2.802;DP=384;FS=11.050;HRun=0;HaplotypeScore=77.9634;InbreedingCoeff=-0.0685;MQ=25.85;MQ0=58;MQRankSum=0.833;QD=4.00;ReadPosRankSum=-2.826;VQSLOD=-0.0129;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:17:2.03:0,2,5	./.	./.	./.	./.	0/0:18,0:15:1.70:0,2,5	0/0:14,1:10:0:0,0,0	0/1:18,2:15:99:169,0,135	0/0:9,0:9:2.18:0,2,8	0/1:15,0:11:56.22:240,0,56	./.	0/1:14,1:14:2.64:3,0,7	0/1:18,1:18:26.95:59,0,27	0/0:18,0:17:2.82:0,3,28	1/1:23,0:21:1.25:3,1,0	1/1:13,1:13:6.02:96,6,0	0/0:13,0:12:13.24:0,13,271	0/1:16,0:13:6.92:7,0,407	0/1:12,0:10:95.80:96,0,176	0/0:11,0:6:0.89:0,1,2	./.	./.	./.	./.	1/1:15,0:12:0.47:1,0,0	0/1:10,1:6:70.35:70,0,94	0/0:13,0:11:4.05:0,4,9	0/0:6,0:6:0:0,0,0
chr10	28230787	.	C	CAG	1036.03	PASS	AB=0.826;AC=18;AF=0.474;AN=38;BaseQRankSum=-0.464;DP=438;FS=5.712;HRun=0;HaplotypeScore=86.5951;InbreedingCoeff=0.1456;MQ=25.95;MQ0=72;MQRankSum=1.625;QD=4.82;ReadPosRankSum=-0.063;VQSLOD=2.1322;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:15,9:19:1.55:4,2,0	./.	./.	./.	./.	0/0:13,7:16:1.41:0,1,4	0/1:14,3:11:0:0,0,0	0/1:21,4:20:59.36:368,0,59	0/1:12,0:12:0.47:0,0,19	0/1:11,5:11:20.98:320,0,21	./.	0/0:13,2:14:4.45:0,4,13	0/1:16,4:19:33.83:60,0,34	1/1:17,2:17:1.67:5,2,0	0/0:22,3:22:5.01:0,5,27	1/1:17,1:17:5.97:59,6,0	0/0:15,0:14:13.91:0,14,192	0/0:17,0:14:21.33:0,21,286	0/1:14,2:13:82.67:152,0,83	./.	./.	./.	./.	1/1:8,7:13:2.99:24,3,0	0/0:14,3:14:0:0,0,0	1/1:7,5:7:17.44:154,17,0	0/1:12,2:12:2.07:2,0,2	0/1:1,5:6:0:0,0,0
chr10	28230793	.	G	GAC	728.33	PASS	AB=0.782;AC=15;AF=0.375;AN=40;BaseQRankSum=3.121;DP=454;FS=1.942;HRun=0;HaplotypeScore=79.8923;InbreedingCoeff=0.1185;MQ=26.19;MQ0=75;MQRankSum=-0.134;QD=3.72;ReadPosRankSum=2.439;VQSLOD=2.0477;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:20,4:19:1.55:4,2,0	./.	./.	./.	./.	0/0:16,6:18:0.38:0,0,1	0/1:13,5:11:0:0,0,0	0/1:22,3:20:99:190,0,149	0/0:9,5:14:1.45:0,1,13	0/1:13,3:11:56.39:92,0,56	./.	1/1:6,9:14:1.68:18,2,0	0/1:9,8:16:2.69:19,0,3	1/1:8,13:18:3.01:53,3,0	0/0:13,13:23:5.37:0,5,24	0/0:13,7:18:6.92:0,7,38	0/0:16,0:15:13.96:0,14,167	0/0:18,0:15:16.18:0,16,312	0/1:13,4:14:79.09:191,0,79	./.	0/0:20,0:9:0:0,0,0	0/0:7,5:11:0:0,0,0	./.	0/0:13,1:12:2.80:0,3,40	0/1:11,7:14:0:0,0,0	0/1:8,4:7:13.16:204,0,13	1/1:6,7:11:7.25:69,7,0	./.
chr10	28230805	.	GAC	G	80.08	PASS	AB=0.979;AC=11;AF=0.262;AN=42;BaseQRankSum=2.108;DP=622;FS=8.269;HRun=0;HaplotypeScore=109.1681;InbreedingCoeff=0.0238;MQ=27.65;MQ0=81;MQRankSum=0.739;QD=0.32;ReadPosRankSum=0.631;VQSLOD=1.6221;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:37,0:31:0:0,0,1	0/0:9,0:7:3.01:0,3,31	./.	./.	./.	0/0:25,1:22:4.47:0,4,21	0/0:28,0:21:3.01:0,3,30	./.	0/0:18,0:20:5.03:0,5,31	0/0:26,0:20:3.01:0,3,43	0/0:13,0:10:3:0,3,26	0/0:18,1:18:6.58:0,7,36	0/0:26,0:25:0.91:0,1,3	0/0:26,0:23:1.55:0,2,5	0/1:38,0:35:4.22:4,0,18	0/1:34,2:34:9.18:54,0,9	0/1:20,0:19:19.81:21,0,20	1/1:20,0:16:5.83:37,6,0	1/1:26,0:23:3:26,3,0	./.	./.	0/1:19,1:19:22.41:22,0,36	0/0:13,0:13:3.01:0,3,31	0/1:21,1:20:22.31:22,0,52	0/1:28,0:23:0:0,0,0	0/0:17,0:12:2.96:0,3,19	0/0:16,0:14:0:0,0,0	./.
chr10	28231025	.	C	CT	9144.97	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=7.217;DP=431;FS=5.153;HRun=7;HaplotypeScore=73.7491;InbreedingCoeff=0.8644;MQ=63.72;MQ0=0;MQRankSum=-3.035;QD=24.85;ReadPosRankSum=1.183;VQSLOD=5.4038;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,17:20:42.10:480,42,0	1/1:1,4:5:9.03:108,9,0	0/0:13,0:11:26.99:0,27,248	0/0:8,0:8:12:0,12,109	1/1:1,20:21:36.11:432,36,0	1/1:2,12:14:33.10:392,33,0	1/1:0,10:10:27.08:324,27,0	1/1:6,20:23:35.75:532,36,0	1/1:3,12:15:30.09:360,30,0	1/1:5,8:15:36.05:398,36,0	1/1:5,13:18:42.02:452,42,0	1/1:0,11:11:30.09:361,30,0	1/1:2,10:12:5.17:233,5,0	1/1:4,10:14:27.07:314,27,0	1/1:2,8:10:5.95:234,6,0	1/1:2,17:19:51.12:597,51,0	0/0:20,0:20:54.09:0,54,521	0/0:22,0:22:66.06:0,66,627	1/1:2,12:14:39.09:452,39,0	1/1:2,22:24:57.56:653,58,0	1/1:2,8:9:7.96:203,8,0	1/1:5,11:16:30.09:358,30,0	1/1:8,15:23:38.99:430,39,0	1/1:1,3:4:6.02:72,6,0	1/1:4,23:27:40.54:583,41,0	1/1:4,18:20:54.16:638,54,0	1/1:2,12:14:33.10:396,33,0	1/1:0,4:4:12.04:144,12,0
chr10	28231307	.	CT	C	9042.24	PASS	AB=0.667;AC=47;AF=0.904;AN=52;BaseQRankSum=2.033;DP=587;FS=10.074;HRun=3;HaplotypeScore=59.7832;InbreedingCoeff=0.7032;MQ=35.75;MQ0=40;MQRankSum=-0.979;QD=17.52;ReadPosRankSum=1.169;VQSLOD=3.5835;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,31:31:54:631,54,0	1/1:0,10:10:18.01:205,18,0	./.	./.	1/1:6,25:25:14.06:184,14,0	1/1:0,20:20:30.09:371,30,0	1/1:1,23:23:36.11:445,36,0	1/1:2,11:5:15:167,15,0	1/1:3,32:33:42.09:503,42,0	1/1:2,21:21:11.04:573,11,0	1/1:1,17:18:17.75:222,18,0	1/1:3,22:22:30.09:372,30,0	1/1:1,23:22:42.13:518,42,0	1/1:3,33:34:48.10:575,48,0	1/1:1,26:26:39.12:483,39,0	1/1:0,25:25:48.15:594,48,0	0/0:41,0:35:51.13:0,51,695	0/0:25,0:18:21.07:0,21,302	1/1:6,5:5:15.05:186,15,0	1/1:2,19:19:24.07:297,24,0	0/1:7,7:8:33.98:65,0,34	1/1:1,16:16:17.93:185,18,0	1/1:3,14:15:32.58:369,33,0	1/1:0,18:17:30.09:372,30,0	1/1:2,18:18:21:241,21,0	1/1:1,20:20:57.18:706,57,0	1/1:0,27:27:57.15:706,57,0	1/1:0,4:4:6.02:74,6,0
chr10	28233623	.	CT	C	15976.65	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-4.452;DP=635;FS=24.225;HRun=7;HaplotypeScore=66.1110;InbreedingCoeff=0.9984;MQ=85.01;MQ0=0;MQRankSum=-7.679;QD=26.99;ReadPosRankSum=6.288;VQSLOD=3.1157;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,36:38:99:1071,105,0	1/1:0,9:9:27.06:275,27,0	0/0:18,0:18:39.08:0,39,439	0/0:25,0:24:35.58:0,36,399	1/1:2,19:21:57.13:581,57,0	1/1:0,17:17:42.10:428,42,0	1/1:2,20:22:54.12:551,54,0	1/1:2,36:38:99:1080,108,0	1/1:2,19:21:47.89:515,48,0	1/1:4,27:31:81.16:819,81,0	1/1:2,10:12:27.06:275,27,0	1/1:2,18:20:54.12:551,54,0	1/1:1,18:19:54.12:551,54,0	1/1:0,24:24:66.15:673,66,0	1/1:1,26:27:69.16:704,69,0	1/1:2,21:23:63.14:643,63,0	1/1:0,17:17:42.10:428,42,0	1/1:1,12:13:33.07:336,33,0	1/1:5,24:29:74.68:720,75,0	1/1:3,23:26:66.08:660,66,0	1/1:1,26:27:75.17:765,75,0	1/1:1,21:22:60.13:611,60,0	1/1:2,22:24:60.13:612,60,0	1/1:1,14:15:39.09:398,39,0	1/1:2,29:31:81.18:826,81,0	1/1:0,26:26:78.11:771,78,0	1/1:0,28:28:81.18:826,81,0	1/1:0,12:12:30.07:306,30,0
chr10	28235569	.	AGT	A	15153.55	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=0.218;DP=551;FS=1.472;HRun=0;HaplotypeScore=77.1709;InbreedingCoeff=0.9847;MQ=61.71;MQ0=6;MQRankSum=-3.131;QD=30.07;ReadPosRankSum=2.937;VQSLOD=6.6096;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,13:15:27.09:352,27,0	1/1:1,5:6:18.06:240,18,0	0/0:13,0:12:33.08:0,33,502	0/0:11,0:9:13.81:0,14,178	1/1:0,30:29:69.09:898,69,0	1/1:2,19:21:48.11:607,48,0	1/1:0,13:12:30.10:392,30,0	1/1:5,37:42:99:1418,111,0	1/1:0,12:12:24.08:307,24,0	1/1:1,26:27:78.26:1038,78,0	1/1:1,25:26:54.17:691,54,0	1/1:1,21:22:48.15:613,48,0	1/1:3,21:23:48.15:616,48,0	1/1:2,17:18:36.11:448,36,0	1/1:1,13:14:30.10:387,30,0	1/1:4,18:20:36.12:464,36,0	0/0:12,0:12:21.07:0,21,354	0/0:11,0:11:30.10:0,30,503	1/1:1,16:17:48.09:588,48,0	1/1:2,30:32:72.23:924,72,0	1/1:0,19:19:48.16:639,48,0	1/1:0,12:12:27.09:354,27,0	1/1:3,19:22:48.16:632,48,0	1/1:2,6:8:15.05:193,15,0	1/1:1,27:28:63.21:829,63,0	1/1:0,26:25:75.25:998,75,0	1/1:2,30:31:75.24:973,75,0	1/1:0,14:14:42.14:554,42,0
chr10	28236352	.	T	TG	275.21	PASS	AB=0.947;AC=5;AF=0.125;AN=40;BaseQRankSum=4.404;DP=201;FS=0.000;HRun=0;HaplotypeScore=15.7050;InbreedingCoeff=0.5372;MQ=53.56;MQ0=10;MQRankSum=-4.404;QD=9.83;ReadPosRankSum=-2.080;VQSLOD=2.2572;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:17,1:17:28.84:29,0,148	./.	./.	0/0:19,0:5:8.86:0,9,92	0/0:5,0:2:6.02:0,6,84	0/0:8,0:8:21.07:0,21,294	0/0:9,0:8:15.02:0,15,189	1/1:1,5:6:12.03:169,12,0	0/0:8,0:8:21.07:0,21,293	0/0:5,0:2:6.02:0,6,84	./.	0/0:7,0:7:21.07:0,21,292	0/0:6,0:6:12.04:0,12,167	0/0:13,0:13:39.13:0,39,542	./.	0/0:4,0:4:12.04:0,12,168	0/0:8,0:6:15.05:0,15,207	0/0:4,0:4:6.02:0,6,84	0/0:10,0:6:18.05:0,18,236	./.	0/0:13,0:11:12.04:0,12,168	0/0:6,0:4:6.02:0,6,80	./.	0/0:7,0:6:9.03:0,9,126	./.	1/1:0,4:4:12.04:191,12,0	0/0:11,0:11:33.11:0,33,461	./.
chr10	28236415	.	T	TA	1656.94	PASS	AC=16;AF=0.348;AN=46;BaseQRankSum=-4.590;DP=254;FS=5.002;HRun=9;HaplotypeScore=26.1746;InbreedingCoeff=0.7898;MQ=52.12;MQ0=9;MQRankSum=1.417;QD=18.83;ReadPosRankSum=-0.064;VQSLOD=2.7581;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,18:21:35.77:376,36,0	./.	./.	./.	1/1:2,7:8:18.05:199,18,0	1/1:3,9:12:21.06:232,21,0	1/1:2,6:7:15.04:166,15,0	1/1:0,0:1:1.55:4,2,0	0/0:10,0:10:26.97:0,27,230	0/0:13,0:9:26.99:0,27,234	0/0:8,0:6:6:0,6,52	0/0:8,0:8:17.99:0,18,156	0/0:17,0:17:41.98:0,42,365	0/0:14,0:14:41.99:0,42,364	./.	0/0:9,0:9:23.99:0,24,208	1/1:3,12:13:31.70:392,32,0	1/1:1,15:18:41.78:427,42,0	0/0:16,1:15:5.84:0,6,279	0/0:2,0:2:3:0,3,26	0/0:12,0:12:26.97:0,27,234	0/0:5,0:4:6:0,6,52	0/0:3,0:2:6:0,6,52	0/0:15,0:14:36.46:0,36,313	0/0:3,0:2:3:0,3,26	1/1:2,1:2:3.01:33,3,0	0/0:22,0:21:65.99:0,66,573	./.
chr10	28236569	.	C	CA	3801.29	PASS	AC=12;AF=0.222;AN=54;BaseQRankSum=-5.610;DP=382;FS=0.999;HRun=1;HaplotypeScore=50.0212;InbreedingCoeff=0.8620;MQ=89.60;MQ0=0;MQRankSum=-2.145;QD=40.87;ReadPosRankSum=1.363;VQSLOD=4.0705;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,37:37:99:1587,111,0	./.	0/0:17,0:18:41.02:0,41,524	0/0:27,0:27:68.44:0,68,821	1/1:1,5:6:12.04:179,12,0	1/1:0,15:15:45.11:649,45,0	1/1:0,10:10:24.04:334,24,0	0/0:27,0:27:75.22:0,75,946	0/0:16,0:16:45.15:0,45,583	0/0:10,0:10:24.06:0,24,290	0/0:2,0:2:5.97:0,6,58	0/0:12,0:12:30.10:0,30,388	0/0:16,0:16:42.14:0,42,545	0/0:19,0:19:51.17:0,51,661	0/0:13,0:13:21.07:0,21,272	0/0:9,0:9:21.07:0,21,272	1/1:0,15:15:45.11:648,45,0	1/1:0,10:10:27.09:404,27,0	0/0:17,0:17:45.13:0,45,565	0/0:7,0:6:6.02:0,6,78	0/0:24,0:24:68.96:0,69,894	0/0:4,0:4:8.96:0,9,82	0/0:1,0:1:3.01:0,3,39	0/0:28,0:28:69.18:0,69,875	0/0:3,0:3:8.96:0,9,95	0/0:15,0:15:45.15:0,45,582	0/0:18,0:18:54.18:0,54,700	0/0:2,0:2:3.01:0,3,39
chr10	28243640	.	AAAATTT	A	417.96	PASS	AB=1.000;AC=18;AF=0.692;AN=26;BaseQRankSum=-2.215;DP=111;FS=2.858;HRun=0;HaplotypeScore=27.9537;InbreedingCoeff=0.3182;MQ=75.95;MQ0=22;MQRankSum=-3.717;QD=9.50;ReadPosRankSum=-1.878;VQSLOD=1.2239;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:1,12:12:18.06:401,18,0	1/1:1,0:1:2.84:14,3,0	0/0:24,0:7:18.06:0,18,369	0/1:6,0:3:8.65:9,0,60	0/0:7,0:5:0.47:0,0,1	./.	./.	1/1:3,0:2:5.42:23,5,0	./.	./.	./.	1/1:3,0:1:2.84:14,3,0	1/1:1,0:1:2.80:13,3,0	./.	1/1:2,0:1:2.88:15,3,0	./.	0/0:15,0:12:27.09:0,27,505	0/1:13,0:12:4.34:4,0,525	./.	1/1:1,0:1:2.84:14,3,0	./.	./.	./.	1/1:1,0:1:2.88:15,3,0	./.	./.	./.	./.
chr10	28243643	.	AT	A	785.76	PASS	AB=1.000;AC=32;AF=0.889;AN=36;BaseQRankSum=-1.926;DP=113;FS=1.900;HRun=6;HaplotypeScore=18.0345;InbreedingCoeff=0.2675;MQ=76.63;MQ0=15;MQRankSum=-1.448;QD=10.07;ReadPosRankSum=0.522;VQSLOD=-0.4235;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:12:12.92:40,13,0	1/1:2,0:2:5.80:32,6,0	0/0:24,0:7:14.94:0,15,133	0/1:6,0:3:4.64:5,0,14	0/1:6,0:5:0:0,0,0	1/1:1,0:1:2.80:13,3,0	1/1:2,0:1:2.80:13,3,0	1/1:1,0:2:5.54:25,6,0	1/1:4,0:4:5.72:30,6,0	./.	./.	1/1:2,0:1:2.90:16,3,0	1/1:1,0:1:2.92:17,3,0	./.	1/1:2,0:2:5.69:30,6,0	./.	1/1:4,11:12:27.07:288,27,0	1/1:2,12:13:29.11:295,29,0	./.	1/1:1,0:1:2.90:16,3,0	./.	./.	1/1:2,0:1:2.94:18,3,0	1/1:2,0:2:5.87:35,6,0	./.	1/1:2,0:1:2.88:15,3,0	./.	./.
chr10	28243799	.	TACAAGTTA	T	225.56	PASS	AB=1.000;AC=13;AF=0.310;AN=42;BaseQRankSum=3.277;DP=132;FS=2.239;HRun=0;HaplotypeScore=40.6846;InbreedingCoeff=-0.0233;MQ=67.06;MQ0=0;MQRankSum=0.428;QD=5.78;ReadPosRankSum=-2.572;VQSLOD=0.6796;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:30.21:0,30,2594	1/1:1,0:1:2.97:20,3,0	0/0:5,0:5:15.05:0,15,656	0/0:5,0:3:9.03:0,9,286	0/0:2,5:7:6.02:0,6,198	0/1:4,0:4:27.25:27,0,185	./.	0/0:4,0:2:6.02:0,6,277	0/1:3,0:3:26.76:27,0,69	0/1:6,0:6:79.19:79,0,353	./.	0/0:3,0:3:9.03:0,9,351	0/0:2,0:2:6.02:0,6,169	0/0:1,0:1:3.01:0,3,75	1/1:1,0:1:3.01:34,3,0	0/1:3,0:3:52.99:53,0,131	0/0:21,0:21:45.15:0,45,2032	0/0:17,0:17:45.15:0,45,2065	./.	0/1:4,0:4:10.02:10,0,224	./.	0/0:2,0:2:6.02:0,6,195	1/1:6,0:6:3.01:40,3,0	./.	0/1:5,0:5:33.78:34,0,71	./.	0/1:6,0:6:33.21:33,0,344	./.
chr10	28244373	.	A	ATT	1761.43	PASS	AB=0.663;AC=30;AF=0.536;AN=56;BaseQRankSum=3.010;DP=707;FS=2.502;HRun=15;HaplotypeScore=105.1163;InbreedingCoeff=-0.1338;MQ=68.52;MQ0=1;MQRankSum=0.579;QD=3.04;ReadPosRankSum=1.267;VQSLOD=-0.0384;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:17,1:43:84.33:86,0,84	1/1:3,3:13:24.43:184,24,0	0/0:19,0:16:14.63:0,15,109	0/1:17,0:14:1.99:2,0,56	0/0:39,0:45:52.82:0,53,500	0/1:8,0:22:49.22:49,0,59	1/1:8,2:32:7.84:132,8,0	0/1:16,2:30:2.94:175,0,3	0/1:7,0:22:11.27:22,0,11	0/1:12,0:29:8.61:117,0,9	0/1:5,1:20:18.57:70,0,19	0/1:8,0:30:17.87:84,0,18	0/1:11,0:27:4.71:37,0,5	1/1:7,1:20:17.96:91,18,0	1/1:10,0:34:23.96:86,24,0	1/1:7,11:24:30.47:263,30,0	0/1:5,1:23:33.04:63,0,33	0/1:8,0:12:3.53:4,0,57	0/0:33,0:34:33.58:0,34,258	0/0:23,0:29:45.66:0,46,345	0/1:25,0:29:17.06:17,0,182	0/1:15,1:27:76.14:76,0,102	0/1:11,0:27:39.51:56,0,40	0/1:8,0:24:17.69:55,0,18	0/1:8,0:21:1.11:56,0,1	1/1:10,0:23:7.68:86,8,0	0/1:7,2:20:0.44:85,0,0	0/1:1,0:10:6.41:34,0,6
chr10	28246311	.	GA	G	15224.07	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=6.601;DP=581;FS=13.070;HRun=5;HaplotypeScore=144.9690;InbreedingCoeff=0.9964;MQ=82.27;MQ0=0;MQRankSum=-9.608;QD=28.19;ReadPosRankSum=4.590;VQSLOD=3.0359;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,39:42:99:1113,102,0	1/1:2,14:16:45:463,45,0	0/0:20,0:20:44.98:0,45,583	0/0:21,0:21:53.36:0,53,678	1/1:3,21:24:42.11:458,42,0	1/1:0,19:19:57.15:621,57,0	1/1:2,19:21:57.15:624,57,0	1/1:3,20:23:60.13:639,60,0	1/1:0,24:24:66.18:723,66,0	1/1:0,16:16:48.13:525,48,0	1/1:0,9:9:24.06:255,24,0	1/1:5,28:33:87.22:942,87,0	1/1:1,18:19:51.14:557,51,0	1/1:2,14:16:36.08:385,36,0	1/1:4,28:32:75.16:807,75,0	1/1:3,26:29:78.21:852,78,0	1/1:3,15:18:45.04:477,45,0	1/1:1,19:20:57.11:611,57,0	1/1:3,14:17:45.12:491,45,0	1/1:1,14:15:42.07:444,42,0	1/1:4,15:19:45.12:491,45,0	1/1:2,15:17:45.12:489,45,0	1/1:3,7:10:21.01:217,21,0	1/1:1,19:20:51.14:556,51,0	1/1:1,25:26:75.20:820,75,0	1/1:2,22:24:69.18:747,69,0	1/1:1,20:21:54.14:588,54,0	1/1:0,10:10:30.08:329,30,0
chr10	28248900	.	T	TA	825.76	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=-5.400;DP=545;FS=10.399;HRun=11;HaplotypeScore=57.8848;InbreedingCoeff=0.7330;MQ=76.38;MQ0=0;MQRankSum=-0.530;QD=17.57;ReadPosRankSum=0.967;VQSLOD=4.2070;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,2:46:79.98:0,80,797	0/0:17,0:17:38.84:0,39,302	0/0:19,0:17:4.46:0,4,27	0/1:6,0:5:11.28:11,0,16	0/0:20,0:20:53.79:0,54,418	0/0:17,0:17:44.82:0,45,348	0/0:21,0:21:47.74:0,48,369	0/0:22,0:22:47.77:0,48,371	0/0:26,0:25:59.74:0,60,464	0/0:15,0:15:35.82:0,36,277	0/0:17,0:17:23.84:0,24,186	0/0:19,0:19:23.87:0,24,323	0/0:9,0:9:17.90:0,18,139	0/0:15,0:15:35.81:0,36,274	0/0:19,0:19:38.79:0,39,302	0/0:19,0:19:47.81:0,48,372	1/1:2,22:26:65.80:638,66,0	1/1:5,10:15:30.06:305,30,0	0/0:23,1:25:22.34:0,22,342	0/0:17,0:17:44.79:0,45,346	0/0:19,0:19:44.81:0,45,348	0/0:21,1:22:17.33:0,17,318	0/0:31,0:31:65.70:0,66,511	0/0:21,2:23:32.29:0,32,428	0/0:19,0:20:46.84:0,47,354	0/0:20,0:20:26.96:0,27,305	0/0:14,0:14:35.86:0,36,279	0/0:6,0:6:11.93:0,12,93
chr10	28249339	.	TC	T	22489.57	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=3.229;DP=754;FS=1.882;HRun=3;HaplotypeScore=91.7072;InbreedingCoeff=0.9998;MQ=81.17;MQ0=0;MQRankSum=-7.546;QD=33.87;ReadPosRankSum=3.762;VQSLOD=5.2493;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,50:52:99:1822,147,0	1/1:0,13:13:33.10:407,33,0	0/0:19,0:19:57.15:0,57,750	0/0:20,0:20:54.62:0,55,736	1/1:0,27:27:75.24:930,75,0	1/1:0,28:28:81.25:1004,81,0	1/1:1,18:19:54.17:669,54,0	1/1:2,30:32:81.25:1003,81,0	1/1:1,29:30:87.27:1079,87,0	1/1:1,23:24:69.22:856,69,0	1/1:2,14:16:42.13:521,42,0	1/1:0,40:40:99:1339,108,0	1/1:3,26:29:66.21:818,66,0	1/1:0,22:22:60.19:744,60,0	1/1:0,29:29:84.26:1041,84,0	1/1:4,33:37:99:1227,99,0	0/0:28,0:28:84.27:0,84,1190	0/0:23,0:23:69.21:0,69,973	1/1:1,31:32:93.26:1127,93,0	1/1:2,31:33:90.28:1116,90,0	1/1:1,34:35:93.29:1153,93,0	1/1:0,24:24:72.23:892,72,0	1/1:1,24:25:66.21:816,66,0	1/1:0,22:22:66.21:818,66,0	1/1:0,22:22:66.21:818,66,0	1/1:3,30:33:87.26:1064,87,0	1/1:2,26:28:66.21:818,66,0	1/1:0,12:12:33.10:409,33,0
chr10	28250139	.	GC	G	13970.64	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=3.730;DP=678;FS=4.827;HRun=8;HaplotypeScore=72.3488;InbreedingCoeff=0.9951;MQ=83.97;MQ0=0;MQRankSum=-5.020;QD=23.92;ReadPosRankSum=3.036;VQSLOD=5.7516;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,46:49:99:1245,129,0	1/1:1,9:10:27.04:261,27,0	0/0:15,0:16:30.43:0,30,341	0/0:25,0:25:66.11:0,66,738	1/1:4,23:27:63.05:599,63,0	1/1:2,23:25:63.10:608,63,0	1/1:3,22:25:51.08:492,51,0	1/1:1,23:24:66.04:618,66,0	1/1:3,17:20:45.07:434,45,0	1/1:3,24:27:69.11:666,69,0	1/1:0,25:25:63.10:608,63,0	1/1:4,27:31:75.12:724,75,0	1/1:2,18:20:51.08:492,51,0	1/1:3,23:26:63.10:608,63,0	1/1:0,17:17:48.08:464,48,0	1/1:2,28:30:69.11:666,69,0	0/0:31,0:31:81.22:0,81,956	0/0:22,0:22:57.12:0,57,660	1/1:8,22:30:66.07:627,66,0	1/1:1,22:23:60.05:570,60,0	1/1:5,40:45:99:1043,108,0	1/1:0,14:14:39.06:376,39,0	1/1:0,23:23:66.11:637,66,0	1/1:5,16:21:42.05:406,42,0	1/1:1,24:25:69.11:666,69,0	1/1:2,19:21:57.09:550,57,0	1/1:3,18:21:48.08:463,48,0	1/1:0,5:5:15.02:145,15,0
chr10	28250670	.	C	CA	14720.32	PASS	AB=1.000;AC=49;AF=0.875;AN=56;BaseQRankSum=-6.498;DP=558;FS=10.786;HRun=7;HaplotypeScore=65.1307;InbreedingCoeff=0.8108;MQ=77.83;MQ0=0;MQRankSum=-3.086;QD=28.75;ReadPosRankSum=0.312;VQSLOD=4.9275;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,21:26:34.22:695,34,0	1/1:0,7:7:21.06:253,21,0	0/1:18,0:18:20.28:20,0,178	0/0:9,0:9:8.18:0,8,60	1/1:5,30:35:87.25:1033,87,0	1/1:4,13:17:39.11:460,39,0	1/1:4,12:17:36.11:434,36,0	1/1:1,23:24:69.20:822,69,0	1/1:0,16:16:39.12:471,39,0	1/1:3,16:19:51.16:614,51,0	1/1:2,16:18:45.14:542,45,0	1/1:0,22:22:60.18:725,60,0	1/1:3,14:17:39.04:437,39,0	1/1:4,15:19:36.11:435,36,0	1/1:1,23:24:63.19:761,63,0	1/1:2,8:9:24.07:290,24,0	0/0:22,0:22:63.10:0,63,608	0/0:15,0:15:36.06:0,36,347	1/1:5,15:21:51.15:607,51,0	1/1:6,24:30:72.18:853,72,0	1/1:1,8:9:21.06:254,21,0	1/1:1,28:29:78.24:938,78,0	1/1:2,20:22:57.17:688,57,0	1/1:4,16:20:50.60:573,51,0	1/1:3,30:33:87.18:1018,87,0	1/1:1,25:26:75.23:905,75,0	1/1:5,16:21:45.13:532,45,0	1/1:2,10:12:30.09:362,30,0
chr10	28250708	.	TCA	T	5716.52	PASS	AB=0.740;AC=44;AF=0.815;AN=54;BaseQRankSum=-2.974;DP=513;FS=2.648;HRun=0;HaplotypeScore=105.3982;InbreedingCoeff=0.4129;MQ=67.18;MQ0=5;MQRankSum=0.993;QD=13.36;ReadPosRankSum=-0.637;VQSLOD=4.7663;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:20,5:25:32.17:320,32,0	0/1:3,2:5:54.12:55,0,54	./.	0/0:21,0:17:2.80:0,3,13	0/1:11,2:15:5.25:110,0,5	1/1:9,5:15:18.33:221,18,0	1/1:9,6:16:21.78:216,22,0	1/1:15,3:18:9.46:101,9,0	1/1:10,3:15:17.71:161,18,0	1/1:10,7:17:21.05:232,21,0	1/1:9,3:13:20.19:172,20,0	1/1:10,4:15:15.75:141,16,0	1/1:6,9:15:33.08:360,33,0	1/1:9,10:21:35.82:364,36,0	1/1:12,11:26:37.18:383,37,0	1/1:7,7:13:24.06:266,24,0	0/0:14,1:24:5.73:0,6,325	0/0:10,0:18:26.99:0,27,252	1/1:15,2:16:14.20:120,14,0	0/1:14,8:24:0.46:263,0,0	0/1:12,6:18:16.46:234,0,16	1/1:21,6:27:17.75:337,18,0	1/1:11,3:14:7.42:106,7,0	1/1:13,16:30:40.33:533,40,0	1/1:12,13:26:38.19:438,38,0	1/1:15,4:19:20.54:206,21,0	1/1:12,7:19:32.54:345,33,0	1/1:2,1:3:3.01:33,3,0
chr10	28251357	.	A	AT	15884.71	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=7.783;DP=553;FS=3.989;HRun=6;HaplotypeScore=112.3838;InbreedingCoeff=0.9880;MQ=83.86;MQ0=0;MQRankSum=-4.034;QD=32.68;ReadPosRankSum=2.521;VQSLOD=3.8978;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,16:18:45.14:566,45,0	1/1:1,4:5:12.04:151,12,0	0/0:20,0:20:48.06:0,48,473	0/0:11,0:11:24.03:0,24,237	1/1:1,34:36:96.22:1163,96,0	1/1:0,24:24:69.22:868,69,0	1/1:1,11:12:27.09:340,27,0	1/1:7,22:29:66.21:829,66,0	1/1:0,11:11:30.10:377,30,0	1/1:1,25:25:75.20:915,75,0	1/1:1,17:18:48.11:586,48,0	1/1:1,15:16:36.12:453,36,0	1/1:1,28:29:72.23:906,72,0	1/1:1,17:18:51.16:642,51,0	1/1:2,20:22:57.18:715,57,0	1/1:1,16:17:45.14:566,45,0	0/0:11,0:11:30.05:0,30,299	0/0:25,0:25:69.16:0,69,704	1/1:1,20:21:60.18:736,60,0	1/1:0,26:26:75.24:944,75,0	1/1:1,16:17:42.13:528,42,0	1/1:1,17:18:51.16:637,51,0	1/1:2,26:28:69.22:868,69,0	1/1:4,13:17:36.12:453,36,0	1/1:0,20:20:60.19:755,60,0	1/1:4,22:26:66.21:830,66,0	1/1:0,24:23:66.21:830,66,0	1/1:0,8:8:18.06:226,18,0
chr10	28251913	.	CTT	C	9589.49	PASS	AB=1.000;AC=53;AF=0.946;AN=56;BaseQRankSum=-6.293;DP=526;FS=0.000;HRun=13;HaplotypeScore=73.0084;InbreedingCoeff=0.5553;MQ=69.58;MQ0=2;MQRankSum=-0.975;QD=18.99;ReadPosRankSum=3.358;VQSLOD=4.2525;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,23:26:60.07:582,60,0	1/1:2,6:9:20.77:186,21,0	0/0:21,0:16:12.65:0,13,252	0/1:10,0:9:16.98:17,0,99	1/1:4,24:29:44.84:486,45,0	1/1:2,16:18:38.64:377,39,0	1/1:2,13:15:7.06:213,7,0	1/1:6,19:25:56.98:528,57,0	1/1:0,16:16:39.06:378,39,0	1/1:5,15:22:41.63:425,42,0	1/1:3,17:20:35.92:349,36,0	1/1:4,10:15:26.76:245,27,0	1/1:3,14:17:36.04:349,36,0	1/1:2,13:15:33.05:320,33,0	1/1:4,17:22:7.35:405,7,0	1/1:4,12:16:35.73:332,36,0	1/1:7,17:26:23.54:364,24,0	1/1:4,14:19:35.94:399,36,0	1/1:4,11:15:32.95:308,33,0	1/1:6,14:21:38.96:378,39,0	1/1:3,8:13:23.44:198,23,0	1/1:6,15:22:50.79:477,51,0	1/1:4,17:23:53.51:489,54,0	1/1:1,12:13:27.04:262,27,0	1/1:3,16:20:38.96:428,39,0	1/1:3,17:20:51.04:488,51,0	1/1:8,14:25:20.74:352,21,0	1/1:0,10:11:20.97:253,21,0
chr10	28252037	.	G	GT	17079.84	PASS	AC=50;AF=0.926;AN=54;BaseQRankSum=-0.186;DP=612;FS=8.531;HRun=7;HaplotypeScore=143.8441;InbreedingCoeff=0.9985;MQ=79.89;MQ0=0;MQRankSum=-7.609;QD=29.60;ReadPosRankSum=5.228;VQSLOD=3.0453;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,35:38:96.29:1159,96,0	1/1:0,13:13:33.10:399,33,0	0/0:16,0:16:35.61:0,36,312	0/0:19,0:19:35.88:0,36,341	1/1:4,23:28:69.18:813,69,0	1/1:2,27:29:75.23:906,75,0	1/1:2,14:16:39.12:471,39,0	1/1:7,13:20:39.12:471,39,0	1/1:1,25:26:63.19:761,63,0	1/1:3,22:25:66.20:797,66,0	1/1:0,16:16:45.14:543,45,0	1/1:1,18:19:48.15:580,48,0	1/1:3,17:20:44.77:543,45,0	1/1:1,17:18:42.13:507,42,0	1/1:4,23:27:66.20:797,66,0	1/1:5,19:24:57.17:689,57,0	1/1:3,28:31:78.24:942,78,0	1/1:3,11:14:27.08:325,27,0	1/1:5,20:25:60.18:724,60,0	1/1:2,24:26:66.16:780,66,0	1/1:4,16:20:42.13:507,42,0	1/1:3,24:27:63.15:744,63,0	1/1:2,25:27:69.21:831,69,0	1/1:1,10:11:27.08:326,27,0	1/1:1,28:29:75.23:906,75,0	1/1:1,20:21:57.17:689,57,0	1/1:2,25:27:72.22:869,72,0	./.
chr10	28255992	.	GCA	G	2916.76	PASS	AB=0.803;AC=44;AF=0.846;AN=52;BaseQRankSum=2.502;DP=620;FS=9.673;HRun=0;HaplotypeScore=88.2479;InbreedingCoeff=-0.0273;MQ=63.22;MQ0=20;MQRankSum=0.652;QD=5.62;ReadPosRankSum=1.334;VQSLOD=2.2573;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:24,10:34:17.88:177,18,0	0/1:8,3:13:27.09:82,0,27	./.	./.	1/1:19,3:22:4.49:123,4,0	1/1:13,6:20:20.72:190,21,0	1/1:18,11:30:11.70:112,12,0	0/0:27,0:27:3.62:0,4,14	1/1:11,11:24:17.38:153,17,0	1/1:18,7:25:20.82:191,21,0	1/1:10,0:10:6.01:65,6,0	1/1:10,10:20:17.91:195,18,0	1/1:4,12:16:23.51:260,24,0	1/1:10,1:13:11.86:111,12,0	0/1:15,0:15:13.49:27,0,13	0/1:8,2:17:26.91:104,0,27	1/1:9,0:17:2.84:14,3,0	1/1:15,0:21:14.11:67,14,0	1/1:10,1:13:14.71:126,15,0	0/1:15,7:22:32.41:74,0,32	0/1:28,13:39:10.93:86,0,11	1/1:17,0:19:17.70:150,18,0	1/1:16,10:27:20.81:209,21,0	1/1:18,11:29:14.34:200,14,0	0/1:22,1:23:45.22:84,0,45	1/1:13,0:17:16.64:122,17,0	1/1:14,6:19:9.49:98,9,0	1/1:6,1:7:2.76:32,3,0
chr10	28257907	.	TA	T	11776.47	PASS	AB=0.889;AC=49;AF=0.875;AN=56;BaseQRankSum=3.009;DP=614;FS=2.865;HRun=10;HaplotypeScore=63.6284;InbreedingCoeff=0.7369;MQ=74.99;MQ0=0;MQRankSum=-0.411;QD=20.88;ReadPosRankSum=1.222;VQSLOD=5.9721;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,14:19:41.98:365,42,0	1/1:2,5:7:14.99:130,15,0	0/0:15,0:15:11.02:0,11,173	0/0:9,0:9:2.67:0,3,31	1/1:2,37:39:99:886,102,0	1/1:4,19:23:44.99:391,45,0	1/1:2,10:12:26.99:234,27,0	1/1:8,23:31:71.96:625,72,0	1/1:1,24:25:65.99:573,66,0	1/1:3,26:29:77.98:677,78,0	1/1:1,26:27:77.98:677,78,0	1/1:2,14:16:41.99:365,42,0	1/1:6,23:29:59.98:521,60,0	1/1:1,16:17:41.99:365,42,0	1/1:0,25:25:68.99:599,69,0	1/1:2,20:22:53.99:469,54,0	0/0:26,0:26:72.15:0,72,776	0/1:14,2:16:19.02:19,0,266	1/1:2,16:18:47.99:417,48,0	1/1:3,19:22:56.98:495,57,0	1/1:2,17:19:47.99:417,48,0	1/1:3,22:25:62.97:547,63,0	1/1:3,19:23:56.02:475,56,0	1/1:6,10:16:26.98:234,27,0	1/1:3,29:32:77.87:677,78,0	1/1:3,28:31:83.97:729,84,0	1/1:3,33:37:94.90:813,95,0	1/1:1,3:4:9:78,9,0
chr10	28260381	.	GGA	G	237.43	PASS	AB=0.969;AC=19;AF=0.365;AN=52;BaseQRankSum=-3.170;DP=285;FS=54.741;HRun=0;HaplotypeScore=65.8939;InbreedingCoeff=0.0166;MQ=35.34;MQ0=35;MQRankSum=0.517;QD=1.40;ReadPosRankSum=3.124;VQSLOD=-0.7095;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,3:15:4.29:0,4,37	0/1:7,0:7:14.61:15,0,58	./.	./.	0/0:8,0:8:3.85:0,4,23	1/1:13,1:12:1.66:18,2,0	0/1:17,1:13:3.10:3,0,28	1/1:10,0:10:6.90:61,7,0	0/0:2,0:1:2.99:0,3,23	0/1:17,3:18:93.06:93,0,151	0/1:10,0:9:0.06:0,0,0	0/0:10,1:10:6.42:0,6,56	0/1:6,0:5:3.98:4,0,40	0/1:8,1:7:0.76:5,0,1	0/0:5,0:4:6.69:0,7,71	0/0:16,1:14:8.58:0,9,103	0/0:10,0:9:11.06:0,11,109	0/0:7,0:5:6:0,6,83	1/1:7,0:4:5.68:42,6,0	0/1:14,1:15:5.32:5,0,84	0/0:12,0:7:5.97:0,6,60	0/0:6,1:7:2.86:0,3,18	0/1:15,0:15:32.38:36,0,32	0/1:9,0:5:1.47:25,0,1	0/0:18,0:17:3.06:0,3,67	0/1:20,0:19:18.70:19,0,228	0/1:8,0:8:29.67:30,0,31	1/1:2,0:1:2.97:20,3,0
chr10	28260415	.	AAG	A	5621.24	PASS	AB=0.739;AC=30;AF=0.536;AN=56;BaseQRankSum=0.187;DP=456;FS=9.276;HRun=0;HaplotypeScore=80.3028;InbreedingCoeff=-0.7947;MQ=41.41;MQ0=37;MQRankSum=5.178;QD=12.33;ReadPosRankSum=3.043;VQSLOD=3.5396;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:10,18:26:54.30:309,0,54	0/1:4,4:8:22.89:188,0,23	0/1:38,1:7:25:25,0,39	0/1:56,0:12:3.59:4,0,196	0/1:10,5:14:4.61:234,0,5	0/1:7,10:15:4.66:252,0,5	0/1:15,5:16:99:304,0,106	0/1:4,8:12:23.33:324,0,23	0/1:3,4:5:16.35:82,0,16	0/1:14,12:25:99:504,0,287	0/1:5,3:8:5.12:185,0,5	0/1:10,7:16:40.62:296,0,41	0/1:3,4:6:46.81:124,0,47	1/1:1,6:7:11.96:186,12,0	0/1:9,3:11:99:151,0,114	0/1:6,9:15:13.95:364,0,14	0/1:18,1:18:98.45:104,0,98	0/1:7,0:7:42.53:46,0,43	0/1:10,2:11:87.74:88,0,174	0/1:8,11:19:43.46:246,0,43	0/1:7,6:11:27.32:128,0,27	0/1:6,5:11:12.07:229,0,12	0/1:8,8:16:38.01:240,0,38	1/1:0,11:11:11.83:171,12,0	0/1:11,8:18:55.44:365,0,55	0/1:15,6:20:99:267,0,228	0/1:5,2:6:29.59:120,0,30	0/1:2,3:5:38.84:86,0,39
chr10	28260417	.	G	GGA	3613.58	PASS	AB=0.934;AC=48;AF=0.857;AN=56;BaseQRankSum=-1.639;DP=475;FS=9.386;HRun=0;HaplotypeScore=101.1237;InbreedingCoeff=0.2913;MQ=41.84;MQ0=35;MQRankSum=1.839;QD=9.77;ReadPosRankSum=0.048;VQSLOD=2.6071;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:25,2:26:29.12:247,29,0	1/1:8,0:8:14.64:106,15,0	0/0:43,0:8:1.84:0,2,15	0/0:62,0:14:10.45:0,10,131	1/1:13,1:14:23.89:228,24,0	1/1:17,0:15:17.77:123,18,0	0/1:18,1:17:3.49:174,0,3	1/1:13,0:13:22.46:140,22,0	1/1:7,0:5:5.98:47,6,0	1/1:27,0:26:45.81:345,46,0	1/1:10,0:10:16.35:104,16,0	1/1:20,1:20:36.07:294,36,0	1/1:7,0:7:8.94:66,9,0	1/1:7,0:7:5.91:58,6,0	0/1:8,3:10:11.73:211,0,12	1/1:15,0:15:25.42:163,25,0	0/1:20,0:19:7.13:72,0,7	1/1:7,0:7:7.50:45,7,0	1/1:10,2:11:14.21:147,14,0	1/1:19,0:19:16.69:114,17,0	1/1:12,1:11:12.41:109,12,0	1/1:11,1:13:18.55:149,19,0	1/1:16,0:16:17.42:131,17,0	1/1:12,0:12:7.81:68,8,0	1/1:18,1:18:29.85:253,30,0	1/1:21,0:20:27.75:171,28,0	0/1:7,0:6:6.45:46,0,6	1/1:7,0:7:1.77:4,2,0
chr10	28260529	.	A	AAC	8737.80	PASS	AB=0.741;AC=30;AF=0.536;AN=56;BaseQRankSum=-6.872;DP=660;FS=6.292;HRun=0;HaplotypeScore=93.6042;InbreedingCoeff=-0.6012;MQ=62.69;MQ0=4;MQRankSum=2.081;QD=13.89;ReadPosRankSum=-0.900;VQSLOD=3.7366;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:11,13:25:38.24:209,0,38	0/1:7,3:10:49.35:138,0,49	0/0:21,0:16:2.97:0,3,20	0/1:38,0:28:14.29:14,0,77	1/1:15,5:20:7.75:385,8,0	0/1:16,4:20:50.29:133,0,50	0/1:9,17:26:28.96:467,0,29	1/1:38,0:35:22.36:206,22,0	0/1:9,14:24:18:314,0,18	0/1:11,13:24:99:454,0,109	0/1:14,14:28:93.54:418,0,94	0/1:16,6:23:48.57:332,0,49	0/1:11,13:24:34.65:379,0,35	0/1:18,6:24:50.50:406,0,50	1/1:20,12:32:12.01:768,12,0	0/1:6,12:18:33.74:370,0,34	0/0:4,0:10:2.84:0,3,14	0/1:6,0:6:0:0,0,0	0/1:17,3:19:77.83:185,0,78	0/1:16,9:26:81.23:467,0,81	0/1:31,12:43:60.45:659,0,60	0/1:8,16:24:31.98:424,0,32	0/1:12,5:17:32.01:397,0,32	1/1:9,18:27:9.78:308,10,0	0/1:14,6:20:26.21:341,0,26	0/1:24,5:28:99:347,0,104	0/1:9,18:28:74.03:418,0,74	0/1:6,6:12:72.26:198,0,72
chr10	28260581	.	AACATACATACAT	A	6428.67	PASS	AB=0.875;AC=49;AF=0.980;AN=50;BaseQRankSum=1.050;DP=598;FS=0.000;HRun=0;HaplotypeScore=215.0639;InbreedingCoeff=-0.0883;MQ=54.91;MQ0=5;MQRankSum=-1.898;QD=12.29;ReadPosRankSum=-2.026;VQSLOD=3.3690;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:13:9.03:158,9,0	1/1:5,8:13:7.72:94,8,0	./.	./.	1/1:8,12:21:17.89:150,18,0	1/1:10,5:15:2.87:64,3,0	1/1:24,0:24:15.05:240,15,0	1/1:35,0:35:3.01:48,3,0	1/1:17,6:23:27.07:496,27,0	1/1:20,4:23:27.09:721,27,0	1/1:18,4:22:12.38:155,12,0	1/1:12,13:25:8.91:249,9,0	1/1:13,4:18:17.71:244,18,0	1/1:12,13:26:5.79:102,6,0	1/1:12,14:26:18.06:407,18,0	1/1:14,5:19:27.01:571,27,0	1/1:9,0:8:3.01:84,3,0	./.	1/1:16,5:21:14.93:456,15,0	0/1:18,3:21:24.43:180,0,24	1/1:33,10:42:2.94:72,3,0	1/1:14,3:17:10.25:125,10,0	1/1:10,2:12:6.41:41,6,0	1/1:12,2:15:2.80:51,3,0	1/1:18,4:23:23.11:439,23,0	1/1:15,14:29:36.09:783,36,0	1/1:15,6:21:17.88:454,18,0	1/1:7,1:8:3.01:45,3,0
chr10	28261518	.	AG	A	1408.30	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.341;DP=613;FS=7.326;HRun=7;HaplotypeScore=62.8621;InbreedingCoeff=0.9901;MQ=76.03;MQ0=2;MQRankSum=-0.478;QD=24.71;ReadPosRankSum=1.729;VQSLOD=4.2362;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:72.23:0,72,903	0/0:9,0:9:27.09:0,27,339	0/0:21,0:18:30.91:0,31,346	0/0:19,0:16:15.08:0,15,251	0/0:28,0:28:78.24:0,78,965	0/0:23,0:23:51.16:0,51,632	0/0:30,0:30:84.26:0,84,1043	0/0:27,0:27:75.23:0,75,925	0/0:18,0:18:54.17:0,54,679	0/0:17,0:17:51.16:0,51,641	0/0:22,0:22:63.19:0,63,773	0/0:16,0:16:45.12:0,45,542	0/0:20,0:20:57.18:0,57,717	0/0:25,0:25:72.23:0,72,905	0/0:30,0:30:81.26:0,81,1018	0/0:20,0:20:60.15:0,60,725	1/1:2,32:34:84.19:857,84,0	1/1:1,22:23:66.15:673,66,0	0/0:20,0:20:48.15:0,48,600	0/0:20,0:20:54.17:0,54,679	0/0:39,0:37:96.28:0,96,1179	0/0:28,0:28:72.22:0,72,892	0/0:16,0:16:48.15:0,48,599	0/0:17,0:17:48.15:0,48,602	0/0:18,0:18:54.16:0,54,663	0/0:18,0:18:42.12:0,42,515	0/0:20,0:20:57.18:0,57,716	0/0:8,0:8:24.08:0,24,302
chr10	28264150	.	TTTC	T	1038.55	PASS	AB=0.961;AC=24;AF=0.429;AN=56;BaseQRankSum=-4.198;DP=338;FS=3.197;HRun=0;HaplotypeScore=64.1236;InbreedingCoeff=-0.0818;MQ=37.61;MQ0=99;MQRankSum=-2.881;QD=6.11;ReadPosRankSum=1.231;VQSLOD=2.0435;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:21.34:0,21,72	0/0:1,0:1:2.37:0,2,8	0/0:62,0:6:12.79:0,13,117	0/0:55,0:5:12.14:0,12,151	0/0:12,0:12:18.82:0,19,63	0/1:8,0:5:14.01:34,0,14	0/1:6,0:5:1.81:102,0,2	1/1:12,0:10:9.03:147,9,0	0/0:9,0:9:17.07:0,17,72	0/1:12,1:12:16.58:82,0,17	1/1:6,0:6:0.29:41,0,0	0/1:10,0:9:24.72:25,0,36	0/1:10,0:9:12.85:13,0,42	0/1:11,1:11:21.94:116,0,22	0/0:5,0:4:9.49:0,9,32	0/1:8,1:9:3.28:131,0,3	0/0:5,0:3:1.72:0,2,4	1/1:7,0:5:3.73:11,4,0	1/1:9,0:5:9.01:96,9,0	0/1:4,0:4:5.39:54,0,5	0/0:6,0:3:4.74:0,5,16	0/1:11,2:10:22.37:65,0,22	0/1:8,2:8:4.46:78,0,4	0/1:10,0:10:10.93:11,0,25	0/1:10,0:9:29.33:29,0,30	0/1:13,0:9:31.21:102,0,31	0/1:5,0:5:13.80:34,0,14	1/1:3,0:1:3:28,3,0
chr10	28264154	.	T	TC	57.71	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=2.703;DP=378;FS=5.700;HRun=1;HaplotypeScore=70.0096;InbreedingCoeff=0.6188;MQ=37.83;MQ0=101;MQRankSum=-3.115;QD=5.25;ReadPosRankSum=0.042;VQSLOD=0.3148;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:29.46:0,29,386	0/0:2,0:2:3.01:0,3,42	0/0:72,0:7:17.71:0,18,193	0/0:67,0:7:2.83:0,3,123	0/0:14,0:13:32.55:0,33,393	0/0:10,0:7:11.77:0,12,117	0/0:7,0:6:17.21:0,17,147	0/0:13,0:11:27.13:0,27,268	0/0:9,0:9:27.09:0,27,375	0/0:14,0:13:29.52:0,30,335	0/0:7,0:7:12.02:0,12,139	0/0:9,0:9:26.87:0,27,329	0/0:11,0:10:29.56:0,30,366	0/0:13,0:12:32.04:0,32,327	0/0:5,0:4:12.04:0,12,168	0/0:9,0:9:26.72:0,27,288	1/1:3,2:3:6.01:71,6,0	1/1:3,3:4:9.02:89,9,0	0/0:8,0:4:11.93:0,12,104	0/0:7,0:6:16.76:0,17,149	0/0:5,0:3:9.03:0,9,115	0/0:13,0:11:28.38:0,28,301	0/0:13,0:11:20.54:0,21,222	0/0:10,0:10:18.03:0,18,233	0/0:11,0:10:28.53:0,29,303	0/0:14,0:12:31.52:0,32,313	0/0:6,0:6:17.29:0,17,159	0/0:4,0:1:3:0,3,29
chr10	28264159	.	CT	C	5624.81	PASS	AB=0.643;AC=49;AF=0.875;AN=56;BaseQRankSum=-0.636;DP=422;FS=29.973;HRun=2;HaplotypeScore=54.9934;InbreedingCoeff=0.3587;MQ=39.95;MQ0=105;MQRankSum=3.075;QD=21.72;ReadPosRankSum=6.610;VQSLOD=2.9838;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,12:14:33.11:427,33,0	1/1:0,3:3:9.03:115,9,0	0/0:83,0:10:23.68:0,24,238	0/0:80,0:14:25.37:0,25,259	1/1:3,13:14:27.08:350,27,0	1/1:6,4:7:12.41:161,12,0	1/1:3,5:7:15.11:162,15,0	1/1:3,12:14:26.90:367,27,0	1/1:2,7:9:21.54:274,22,0	1/1:2,11:13:33.11:419,33,0	1/1:4,5:9:3.94:109,4,0	1/1:1,8:9:23.56:282,24,0	1/1:1,10:10:30.10:385,30,0	1/1:6,8:13:31.74:316,32,0	1/1:0,5:5:15.05:194,15,0	1/1:4,5:9:21.84:222,22,0	1/1:2,2:3:5.38:45,5,0	1/1:3,3:4:9.02:102,9,0	1/1:5,4:5:12:120,12,0	1/1:2,5:6:17.64:203,18,0	1/1:1,5:5:6:78,6,0	1/1:6,7:11:24.09:283,24,0	0/1:10,7:14:24.60:114,0,25	1/1:3,7:10:8.35:185,8,0	1/1:5,8:10:3.96:186,4,0	0/1:7,11:15:12.78:349,0,13	0/1:2,4:6:17.09:147,0,17	1/1:5,0:2:5.77:33,6,0
chr10	28265071	.	C	CTCTA	25424.17	PASS	AB=0.609;AC=51;AF=0.911;AN=56;BaseQRankSum=-5.716;DP=638;FS=21.421;HRun=0;HaplotypeScore=100.2086;InbreedingCoeff=0.6643;MQ=69.29;MQ0=0;MQRankSum=-4.889;QD=42.73;ReadPosRankSum=3.816;VQSLOD=3.7192;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:10,17:27:26.23:1144,26,0	1/1:1,5:6:12.04:293,12,0	0/0:25,0:22:23.34:0,23,389	0/0:18,0:17:15.05:0,15,237	0/1:10,17:28:3.98:979,0,4	1/1:8,15:23:45.15:1097,45,0	1/1:15,11:26:36.12:876,36,0	1/1:28,5:34:39.13:904,39,0	1/1:8,15:23:48.16:1151,48,0	1/1:14,18:32:14.05:1275,14,0	1/1:10,16:27:42.14:1023,42,0	1/1:3,13:17:36.12:878,36,0	1/1:8,17:26:45.15:1097,45,0	1/1:8,10:18:33.11:782,33,0	1/1:8,17:24:2.04:1121,2,0	1/1:4,16:21:45.15:1088,45,0	1/1:7,0:12:18.06:308,18,0	1/1:8,0:10:9.03:158,9,0	1/1:13,6:19:24.08:550,24,0	1/1:14,29:43:44.18:2123,44,0	1/1:3,11:14:27.09:658,27,0	1/1:7,14:21:42.14:1022,42,0	1/1:7,21:29:54.19:1317,54,0	1/1:6,18:24:54.19:1315,54,0	1/1:9,20:30:60.21:1463,60,0	1/1:7,17:25:54.64:1266,55,0	1/1:5,21:28:60.21:1463,60,0	1/1:6,1:7:3.01:73,3,0
chr10	28265602	.	T	TA	12232.90	PASS	AB=1.000;AC=54;AF=0.964;AN=56;BaseQRankSum=-6.784;DP=514;FS=2.042;HRun=8;HaplotypeScore=50.2917;InbreedingCoeff=0.0414;MQ=76.34;MQ0=1;MQRankSum=-0.088;QD=23.80;ReadPosRankSum=3.251;VQSLOD=5.4059;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,19:21:57.17:657,57,0	1/1:2,9:11:26.91:276,27,0	0/1:24,0:20:9.39:9,0,130	0/1:13,0:13:23.95:24,0,60	1/1:3,25:28:75.18:850,75,0	1/1:3,15:18:27.08:311,27,0	1/1:1,10:12:27.08:306,27,0	1/1:3,15:18:45.09:487,45,0	1/1:1,15:16:42.12:484,42,0	1/1:5,37:42:99:1225,109,0	1/1:6,21:27:38.75:699,39,0	1/1:4,8:12:21.06:242,21,0	1/1:1,11:12:27.08:307,27,0	1/1:3,15:18:36.11:415,36,0	1/1:3,13:16:33.10:381,33,0	1/1:3,19:22:17.77:457,18,0	1/1:5,17:22:20.71:491,21,0	1/1:0,7:7:12.04:138,12,0	1/1:1,16:17:48.14:553,48,0	1/1:1,15:16:42.05:456,42,0	1/1:1,11:12:24.07:277,24,0	1/1:2,16:18:45.13:519,45,0	1/1:5,15:20:8.68:353,9,0	1/1:0,12:12:36.11:415,36,0	1/1:2,15:17:36.11:415,36,0	1/1:5,21:26:60.18:692,60,0	1/1:4,27:32:63.05:725,63,0	1/1:2,2:4:6.02:69,6,0
chr10	28266625	.	AACACACAC	A	7446.82	PASS	AB=0.901;AC=42;AF=0.808;AN=52;BaseQRankSum=-1.990;DP=420;FS=11.700;HRun=0;HaplotypeScore=142.6151;InbreedingCoeff=0.2149;MQ=59.13;MQ0=4;MQRankSum=0.704;QD=20.18;ReadPosRankSum=4.455;VQSLOD=3.2027;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:17,1:17:16.26:130,0,16	0/1:8,2:11:53.80:281,0,54	0/1:20,0:12:11.63:12,0,543	0/0:19,0:17:27.08:0,27,763	1/1:9,3:12:3.01:52,3,0	1/1:12,1:14:15.04:294,15,0	1/1:9,0:9:5.95:96,6,0	1/1:13,9:21:27.08:560,27,0	1/1:15,4:21:24.05:481,24,0	1/1:22,4:27:24.02:1207,24,0	1/1:10,1:14:18:268,18,0	1/1:12,0:12:18.03:395,18,0	1/1:14,0:16:33.09:662,33,0	1/1:12,1:16:15.03:255,15,0	1/1:13,0:18:9.02:152,9,0	1/1:9,1:12:15.05:376,15,0	0/1:11,0:11:4.86:5,0,193	0/0:11,0:11:17.81:0,18,188	1/1:8,0:8:11.99:144,12,0	0/1:18,0:20:21.37:202,0,21	./.	1/1:14,1:17:12.03:249,12,0	1/1:12,1:14:18.05:366,18,0	./.	1/1:5,1:8:3.01:78,3,0	0/1:9,4:13:21.50:530,0,21	1/1:22,2:24:24.08:547,24,0	1/1:8,0:8:6.02:106,6,0
chr10	28266675	.	GAC	G	2779.77	PASS	AB=0.961;AC=31;AF=0.554;AN=56;BaseQRankSum=-7.099;DP=660;FS=6.811;HRun=0;HaplotypeScore=207.2480;InbreedingCoeff=0.2852;MQ=42.79;MQ0=12;MQRankSum=-1.762;QD=5.64;ReadPosRankSum=-6.995;VQSLOD=0.3611;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:24:2.90:0,3,16	0/1:20,0:19:1.02:1,0,18	0/0:5,0:2:3.47:0,3,28	0/0:9,0:5:14.64:0,15,111	0/1:22,0:21:2.75:52,0,3	0/0:28,0:21:4.89:0,5,46	1/1:20,1:18:31.67:231,32,0	1/1:69,1:67:99:1158,176,0	1/1:23,0:22:4.24:28,4,0	1/1:41,0:40:7.93:365,8,0	1/1:23,1:23:2.98:25,3,0	1/1:13,0:13:4.06:23,4,0	1/1:27,1:27:20.64:264,21,0	1/1:26,0:25:6.19:30,6,0	0/0:35,0:34:7.71:0,8,50	0/0:18,0:18:2.27:0,2,17	0/1:11,5:15:43.94:107,0,44	1/1:8,2:10:18.70:130,19,0	0/1:16,0:14:2.70:138,0,3	0/1:29,1:26:4.32:34,0,4	0/0:14,0:14:2.86:0,3,17	1/1:24,3:27:0.47:1,0,0	0/1:23,0:23:14.80:15,0,26	0/0:15,0:15:2.20:0,2,17	0/0:17,0:16:1.24:0,1,3	1/1:23,0:22:15:224,15,0	1/1:41,3:40:3.78:106,4,0	0/1:16,0:16:9.29:9,0,17
chr10	28266677	.	C	CAG	6619.23	PASS	AB=0.703;AC=49;AF=0.875;AN=56;BaseQRankSum=-3.445;DP=669;FS=1.858;HRun=0;HaplotypeScore=196.6584;InbreedingCoeff=0.2519;MQ=44.76;MQ0=13;MQRankSum=0.762;QD=10.20;ReadPosRankSum=1.081;VQSLOD=4.8604;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,18:24:3.01:53,3,0	0/1:5,15:19:2.21:54,0,2	0/0:7,0:3:0.04:0,0,36	0/0:13,0:8:15:0,15,170	1/1:15,7:21:14.95:184,15,0	1/1:9,18:20:9.03:159,9,0	1/1:22,0:19:26.19:386,26,0	1/1:71,0:68:99:1540,141,0	1/1:9,13:22:1.82:5,2,0	1/1:13,28:40:11.77:964,12,0	1/1:7,17:23:1.82:5,2,0	1/1:2,11:14:6.02:87,6,0	1/1:21,7:27:43.17:625,43,0	1/1:7,20:26:5.98:50,6,0	1/1:6,29:34:9.03:160,9,0	1/1:4,15:19:2.80:53,3,0	0/1:14,1:14:8.08:157,0,8	1/1:11,0:11:11.12:159,11,0	1/1:7,9:14:3.15:398,3,0	1/1:14,13:26:1.80:116,2,0	1/1:2,13:15:3.01:53,3,0	0/1:9,18:27:0:0,0,0	1/1:6,17:23:7.83:111,8,0	1/1:0,15:15:2.94:53,3,0	1/1:7,10:16:3.01:50,3,0	1/1:2,19:21:54.84:610,55,0	1/1:10,33:39:26.62:392,27,0	1/1:4,12:16:12.04:194,12,0
chr10	28266681	.	GAC	G	36.44	PASS	AB=0.989;AC=8;AF=0.143;AN=56;BaseQRankSum=1.745;DP=677;FS=21.020;HRun=0;HaplotypeScore=210.6661;InbreedingCoeff=-0.0963;MQ=46.44;MQ0=12;MQRankSum=-6.179;QD=0.15;ReadPosRankSum=-2.352;VQSLOD=0.8508;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:24:3:0,3,28	0/1:20,0:19:0.62:1,0,51	0/0:12,0:8:15.93:0,16,159	0/0:16,0:12:35.92:0,36,513	0/0:20,0:19:14.68:0,15,111	0/0:29,0:22:17.60:0,18,166	0/1:22,0:19:1:1,0,216	0/1:75,0:72:23.07:23,0,881	0/0:22,0:21:2.99:0,3,25	0/0:39,0:38:32.61:0,33,505	0/0:23,0:22:2.95:0,3,25	0/0:14,0:14:8.12:0,8,71	0/0:28,1:28:22.78:0,23,298	0/1:28,0:27:21.01:21,0,39	0/0:35,0:34:7.97:0,8,83	0/0:19,0:19:2.33:0,2,27	0/0:13,2:14:8.60:0,9,177	0/0:11,0:11:15.16:0,15,138	0/0:16,0:15:5.21:0,5,227	0/0:27,0:24:11.89:0,12,98	0/0:15,0:15:2.92:0,3,27	1/1:26,1:27:0.47:1,0,0	0/0:24,0:24:11.99:0,12,104	0/0:16,0:16:5.25:0,5,51	0/0:18,0:16:8.98:0,9,76	0/1:23,0:22:56.29:56,0,224	0/1:38,3:38:39.82:40,0,178	0/0:13,0:13:11.97:0,12,105
chr10	28266784	.	TAC	T	16245.03	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=3.952;DP=781;FS=1.376;HRun=0;HaplotypeScore=112.3000;InbreedingCoeff=0.9397;MQ=63.01;MQ0=7;MQRankSum=-2.102;QD=25.99;ReadPosRankSum=5.360;VQSLOD=5.8930;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,28:33:44.95:642,45,0	1/1:2,2:4:9.03:113,9,0	0/0:48,0:36:74.95:0,75,1073	0/0:49,0:34:47.70:0,48,801	1/1:3,18:21:42.13:519,42,0	1/1:4,27:31:69.22:862,69,0	1/1:5,24:29:54.64:673,55,0	1/1:12,32:45:88.33:1081,88,0	1/1:0,37:37:72.12:899,72,0	1/1:5,28:33:78.17:932,78,0	1/1:1,30:32:72.23:898,72,0	1/1:1,20:21:51.16:635,51,0	1/1:4,23:27:60.19:750,60,0	1/1:2,24:26:65.88:790,66,0	1/1:3,23:26:63.20:784,63,0	1/1:6,18:24:39.12:487,39,0	0/0:27,0:27:55.66:0,56,1029	0/0:30,1:31:3.92:0,4,1052	1/1:4,8:12:23.94:227,24,0	1/1:4,28:32:69.15:840,69,0	1/1:5,34:39:72.23:900,72,0	1/1:1,22:24:66.04:802,66,0	1/1:0,13:13:33.11:412,33,0	1/1:4,11:15:30.09:375,30,0	1/1:9,18:27:47.94:599,48,0	1/1:6,24:30:69.22:863,69,0	1/1:5,22:26:60.19:749,60,0	1/1:2,15:17:33.10:412,33,0
chr10	28268891	.	A	AT	7517.38	PASS	AB=1.000;AC=53;AF=0.946;AN=56;BaseQRankSum=-3.222;DP=490;FS=7.265;HRun=9;HaplotypeScore=96.9569;InbreedingCoeff=0.6301;MQ=72.47;MQ0=0;MQRankSum=-0.035;QD=15.76;ReadPosRankSum=1.754;VQSLOD=4.7044;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:21:49.68:297,50,0	1/1:7,0:7:14.75:102,15,0	0/0:13,0:8:5.08:0,5,35	0/1:16,0:13:3.07:3,0,36	1/1:36,0:36:99:607,99,0	1/1:18,0:18:41.67:254,42,0	1/1:11,0:11:29.37:181,29,0	1/1:32,0:32:85.81:587,86,0	1/1:18,0:18:43.64:260,44,0	1/1:26,0:26:65.10:457,65,0	1/1:19,0:19:47.05:299,47,0	1/1:11,0:11:26.44:170,26,0	1/1:15,0:15:40.65:241,41,0	1/1:8,0:8:23.02:134,23,0	1/1:25,0:25:47.12:346,47,0	1/1:12,0:12:23.68:159,24,0	1/1:1,16:17:42.11:465,42,0	1/1:2,12:14:33.09:365,33,0	1/1:23,0:23:45.74:309,46,0	1/1:32,0:32:73.19:513,73,0	1/1:11,0:11:26.07:162,26,0	1/1:18,0:18:41.22:261,41,0	1/1:14,0:14:32.46:212,32,0	1/1:8,0:8:20.60:128,21,0	1/1:13,0:13:35.57:246,36,0	1/1:18,0:18:43.82:283,44,0	1/1:23,0:23:55.66:339,56,0	1/1:11,0:11:5.99:136,6,0
chr10	28268900	.	TA	T	10174.05	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-5.090;DP=476;FS=0.645;HRun=7;HaplotypeScore=90.8601;InbreedingCoeff=0.9172;MQ=75.86;MQ0=0;MQRankSum=-1.569;QD=24.40;ReadPosRankSum=1.009;VQSLOD=4.9734;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,16:17:48.10:487,48,0	1/1:2,3:5:9.02:91,9,0	0/0:13,0:8:11.18:0,11,120	0/0:17,1:15:3.02:0,3,128	1/1:2,33:35:99:988,99,0	1/1:6,13:19:50.23:448,50,0	1/1:0,12:12:30.06:305,30,0	1/1:3,29:32:83.90:807,84,0	1/1:5,13:18:50.56:470,51,0	1/1:2,23:25:62.79:619,63,0	1/1:1,15:17:42.08:426,42,0	1/1:2,10:12:21.04:213,21,0	1/1:0,17:17:42.09:426,42,0	1/1:0,10:10:24.05:244,24,0	1/1:2,21:24:52.87:524,53,0	1/1:1,9:10:21.04:213,21,0	0/0:16,0:16:41.30:0,41,301	0/0:12,0:12:32.86:0,33,247	1/1:2,16:18:47.70:495,48,0	1/1:4,25:29:66.12:670,66,0	1/1:3,8:11:23.88:228,24,0	1/1:1,17:18:42:413,42,0	1/1:1,13:14:32.96:321,33,0	1/1:0,9:9:21.04:213,21,0	1/1:5,10:15:38.65:350,39,0	1/1:0,16:16:47.93:471,48,0	1/1:1,21:22:54.10:549,54,0	1/1:4,6:12:24.96:204,25,0
chr10	28270122	.	C	CTG	4660.86	PASS	AB=0.699;AC=35;AF=0.673;AN=52;BaseQRankSum=-3.808;DP=628;FS=0.000;HRun=0;HaplotypeScore=92.0397;InbreedingCoeff=-0.4720;MQ=67.66;MQ0=6;MQRankSum=2.510;QD=8.16;ReadPosRankSum=1.539;VQSLOD=4.1614;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:23,17:40:35.42:78,0,35	0/1:6,3:9:44.01:76,0,44	./.	./.	1/1:13,7:20:15.05:226,15,0	0/1:13,9:23:36.88:267,0,37	1/1:4,9:14:15.04:207,15,0	1/1:36,3:39:6.36:55,6,0	0/1:15,14:30:11.82:255,0,12	1/1:11,10:21:29.91:391,30,0	0/1:9,12:21:27.43:330,0,27	0/1:7,9:18:24.14:81,0,24	1/1:2,7:10:9.03:127,9,0	1/1:9,8:17:11.56:218,12,0	1/1:11,5:17:11.53:180,12,0	0/1:7,15:22:30.41:289,0,30	0/1:19,2:20:67.16:175,0,67	1/1:6,7:13:14.79:193,15,0	0/1:12,7:19:4.44:146,0,4	0/1:12,14:28:95.82:184,0,96	0/1:24,21:44:1.73:208,0,2	0/1:12,8:21:48.25:144,0,48	0/1:10,10:20:43.94:230,0,44	0/1:14,6:20:17.48:39,0,17	1/1:9,5:14:6.02:90,6,0	0/1:14,11:26:3.82:362,0,4	0/1:16,11:28:73.13:73,0,73	0/1:9,5:13:27.14:39,0,27
chr10	28271547	.	CATATAT	C	523.97	PASS	AC=4;AF=0.286;AN=14;BaseQRankSum=-2.016;DP=121;FS=0.000;HRun=0;HaplotypeScore=31.7206;MQ=52.89;MQ0=4;MQRankSum=0.093;QD=23.82;ReadPosRankSum=3.442;VQSLOD=2.7857;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	0/0:4,0:3:8.24:0,8,95	./.	./.	./.	0/0:14,0:8:18.06:0,18,482	./.	./.	./.	./.	./.	./.	./.	./.	1/1:1,7:9:18.06:363,18,0	1/1:5,8:13:1.26:244,1,0	0/0:8,0:6:3.01:0,3,79	./.	./.	./.	./.	./.	./.	./.	0/0:3,0:3:2.99:0,3,24	0/0:5,0:5:3.01:0,3,99
chr10	28280138	.	TA	T	4398.16	PASS	AB=0.748;AC=48;AF=0.857;AN=56;BaseQRankSum=-2.183;DP=312;FS=8.134;HRun=11;HaplotypeScore=45.6854;InbreedingCoeff=0.5953;MQ=65.28;MQ0=13;MQRankSum=1.990;QD=16.29;ReadPosRankSum=0.951;VQSLOD=5.1708;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,17:20:29.95:246,30,0	1/1:0,2:2:3:25,3,0	0/1:29,1:9:0.56:1,0,44	0/0:25,0:11:5.95:0,6,50	0/1:1,9:10:5.02:170,0,5	1/1:4,6:9:14.98:123,15,0	1/1:2,1:2:3:25,3,0	1/1:3,15:18:43.98:350,44,0	1/1:0,12:12:32.96:271,33,0	1/1:2,11:14:37.99:301,38,0	1/1:1,15:16:44.95:369,45,0	1/1:0,6:7:17.01:129,17,0	1/1:0,4:4:11.99:99,12,0	1/1:0,4:4:11.99:99,12,0	1/1:0,7:7:17.98:148,18,0	1/1:0,3:3:8.99:74,9,0	0/0:2,0:10:14.20:0,14,71	0/0:4,0:7:3.12:0,3,24	1/1:2,4:5:11.98:98,12,0	1/1:2,15:16:44.95:369,45,0	1/1:0,6:6:17.98:148,18,0	1/1:1,8:9:20.98:172,21,0	1/1:1,10:11:23.97:197,24,0	1/1:1,10:12:14.98:123,15,0	1/1:1,9:10:26.97:222,27,0	1/1:4,13:16:38.93:320,39,0	1/1:1,13:13:26.97:221,27,0	1/1:1,4:5:11.99:99,12,0
chr10	28281476	.	T	TA	9401.81	PASS	AB=0.770;AC=48;AF=0.857;AN=56;BaseQRankSum=-8.721;DP=511;FS=0.000;HRun=11;HaplotypeScore=58.7576;InbreedingCoeff=0.6538;MQ=73.77;MQ0=1;MQRankSum=-1.030;QD=20.00;ReadPosRankSum=0.598;VQSLOD=5.6930;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,23:27:16.65:532,17,0	1/1:1,5:7:17.87:167,18,0	0/0:17,0:14:6.76:0,7,114	0/1:7,0:9:5.56:10,0,6	1/1:6,28:34:78.15:792,78,0	1/1:6,18:24:27.87:464,28,0	1/1:3,8:11:18.04:183,18,0	1/1:9,22:31:66.09:649,66,0	1/1:3,18:21:24.86:433,25,0	1/1:10,16:26:51.08:509,51,0	1/1:8,22:30:16.53:507,17,0	1/1:3,7:10:26.41:246,26,0	1/1:5,8:13:21.04:212,21,0	1/1:1,12:13:33.07:335,33,0	1/1:3,18:21:48.10:487,48,0	0/1:5,6:12:25.58:115,0,26	0/0:2,0:18:30.55:0,31,88	0/0:1,0:6:5.86:0,6,17	1/1:3,13:17:21.69:387,22,0	1/1:5,15:21:30.93:451,31,0	1/1:6,5:11:12.02:122,12,0	1/1:2,14:16:39.08:396,39,0	1/1:1,24:26:42.73:600,43,0	1/1:1,6:7:15.03:152,15,0	1/1:4,17:22:35.22:390,35,0	1/1:2,13:15:39.02:373,39,0	1/1:10,26:36:42.90:616,43,0	1/1:0,9:9:27.05:274,27,0
chr10	28282352	.	G	GA	12813.23	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-6.339;DP=610;FS=0.000;HRun=10;HaplotypeScore=61.5875;InbreedingCoeff=0.8378;MQ=72.59;MQ0=1;MQRankSum=-2.880;QD=21.72;ReadPosRankSum=1.275;VQSLOD=5.6916;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,21:28:69.03:712,69,0	1/1:1,8:9:15.04:160,15,0	0/0:12,0:11:17.46:0,17,129	0/0:8,0:8:4.66:0,5,89	1/1:6,24:31:63.36:617,63,0	1/1:1,17:18:42.11:448,42,0	1/1:4,14:18:42.11:447,42,0	1/1:4,24:28:69.11:712,69,0	1/1:4,13:17:8.44:295,8,0	1/1:9,18:28:23.29:429,23,0	1/1:6,22:28:36.97:543,37,0	1/1:2,13:16:33.08:352,33,0	1/1:4,18:22:39.10:416,39,0	1/1:0,13:15:41.81:412,42,0	1/1:1,20:21:51.13:544,51,0	1/1:4,12:16:8.44:295,8,0	1/1:4,16:21:47.99:495,48,0	1/1:5,8:13:18.05:192,18,0	1/1:4,11:16:14.27:332,14,0	1/1:9,36:46:66.56:1051,67,0	1/1:8,23:32:47.05:577,47,0	1/1:8,20:28:47.17:542,47,0	1/1:5,20:25:50.92:525,51,0	1/1:2,21:23:48.12:512,48,0	1/1:5,21:27:41.39:629,41,0	1/1:2,16:18:43.33:441,43,0	1/1:4,26:30:78.03:814,78,0	1/1:3,12:15:30.08:320,30,0
chr10	28284431	.	CACACACACACACACACACA	C	8643.04	PASS	AB=0.775;AC=22;AF=0.393;AN=56;BaseQRankSum=12.412;DP=421;FS=0.000;HRun=0;HaplotypeScore=236.1223;InbreedingCoeff=-0.6468;MQ=64.10;MQ0=17;MQRankSum=-9.228;QD=29.60;ReadPosRankSum=7.802;VQSLOD=2.7425;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:12,2:15:99:235,0,129	0/1:3,1:4:34.98:130,0,35	0/0:28,0:19:52.71:0,53,727	0/0:24,0:16:45.08:0,45,718	0/1:12,6:18:99:110,0,110	0/1:10,2:10:75.82:249,0,76	0/1:7,2:8:90.19:106,0,90	0/0:18,0:17:49.43:0,49,350	0/1:13,4:17:99:503,0,150	0/1:11,6:16:99:783,0,132	0/1:9,3:13:99:194,0,135	0/1:11,3:14:99:348,0,129	0/1:6,4:11:81.84:442,0,82	0/1:6,5:11:82.96:357,0,83	0/1:6,7:13:34.09:822,0,34	0/1:9,2:11:99:243,0,117	0/0:16,0:19:49.39:0,49,2677	0/0:16,0:15:41.96:0,42,2369	0/1:10,2:12:99:361,0,135	0/1:13,8:21:99:866,0,354	0/0:24,0:24:33.24:0,33,220	0/1:7,3:9:54.20:120,0,54	0/1:16,2:19:99:285,0,141	0/1:13,1:12:68.13:86,0,68	0/1:11,5:15:99:588,0,113	0/1:9,5:13:46.82:798,0,47	0/1:5,5:11:45.35:771,0,45	0/1:5,2:7:26.57:247,0,27
chr10	28285062	.	A	ATGTGTGTGTGTG	3819.01	PASS	AB=0.900;AC=42;AF=0.840;AN=50;BaseQRankSum=2.080;DP=374;FS=1.913;HRun=0;HaplotypeScore=133.6411;InbreedingCoeff=0.3327;MQ=45.46;MQ0=13;MQRankSum=-1.026;QD=13.79;ReadPosRankSum=1.211;VQSLOD=2.6768;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	1/1:3,0:5:3.01:152,3,0	0/0:21,0:12:15.05:0,15,484	0/0:11,0:6:6.02:0,6,141	0/0:16,7:22:0.47:0,0,1	1/1:10,4:14:0.47:2,0,0	./.	1/1:23,0:20:9.03:262,9,0	1/1:9,0:9:3.01:49,3,0	1/1:16,0:15:9.81:124,10,0	./.	1/1:9,3:12:6.02:157,6,0	1/1:9,3:12:12.04:409,12,0	1/1:8,0:7:3.46:23,3,0	1/1:10,0:10:4.76:189,5,0	1/1:7,0:11:3.90:75,4,0	1/1:13,0:12:6.91:96,7,0	0/1:5,0:5:28.26:28,0,54	1/1:19,0:22:27.01:770,27,0	1/1:17,0:15:2.04:6,2,0	0/1:6,0:8:0:0,0,0	1/1:14,0:14:6.01:101,6,0	1/1:16,0:13:3.01:50,3,0	1/1:14,0:12:0.47:1,0,0	1/1:7,0:9:3.01:111,3,0	1/1:11,0:9:18.05:575,18,0	1/1:17,0:17:18:471,18,0	1/1:3,0:6:3.01:167,3,0
chr10	28287544	.	GA	G	1363.77	PASS	AB=0.970;AC=26;AF=0.464;AN=56;BaseQRankSum=-5.391;DP=511;FS=6.631;HRun=6;HaplotypeScore=101.4108;InbreedingCoeff=-0.4794;MQ=85.75;MQ0=0;MQRankSum=-2.148;QD=3.30;ReadPosRankSum=-1.517;VQSLOD=-0.6322;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:23,2:25:64.57:65,0,80	1/1:5,0:5:8.42:48,8,0	0/0:35,0:32:57.21:0,57,718	0/0:31,0:28:20.88:0,21,646	0/1:12,1:13:62.81:70,0,63	0/1:25,1:26:43.57:44,0,90	0/1:19,0:19:63.01:63,0,71	1/1:21,4:25:8.38:279,8,0	0/1:22,0:22:59.80:60,0,122	0/1:18,0:18:1.57:79,0,2	0/1:14,1:15:12.61:47,0,13	0/1:13,0:13:48.05:48,0,51	0/1:16,0:16:0.80:41,0,1	0/1:8,0:8:3.97:4,0,8	0/1:23,0:23:14.18:134,0,14	0/1:28,0:28:48.59:49,0,117	0/0:25,0:25:66.21:0,66,868	0/0:7,0:7:15.01:0,15,177	0/1:12,1:13:40.58:62,0,41	0/1:10,0:9:32.81:33,0,38	0/1:17,1:18:15.50:126,0,16	0/1:18,2:20:52.18:52,0,90	0/1:11,0:11:28.91:29,0,43	0/1:19,0:19:5.74:88,0,6	0/1:19,0:19:19.12:19,0,40	0/1:19,0:19:48.30:48,0,55	0/1:22,1:23:14.08:14,0,117	0/1:4,1:5:20.06:20,0,31
chr10	28287850	.	G	GC	682.02	PASS	AB=0.556;AC=3;AF=0.054;AN=56;BaseQRankSum=-5.927;DP=585;FS=5.372;HRun=8;HaplotypeScore=58.8862;InbreedingCoeff=0.6674;MQ=89.41;MQ0=0;MQRankSum=-2.478;QD=25.26;ReadPosRankSum=-0.690;VQSLOD=4.1969;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:63.02:0,63,575	0/0:6,0:6:17.98:0,18,158	0/0:25,0:26:53.04:0,53,468	0/0:21,0:21:47.94:0,48,416	0/0:15,0:15:39.01:0,39,357	0/0:21,0:21:51.02:0,51,466	0/0:22,0:22:51.01:0,51,467	0/0:27,0:27:60.02:0,60,549	0/0:26,0:26:75.04:0,75,686	0/0:25,0:25:51:0,51,463	0/0:28,0:28:78.03:0,78,713	0/0:20,0:20:54.02:0,54,494	0/0:14,0:14:36.02:0,36,330	0/0:20,0:20:60.03:0,60,549	0/0:15,0:15:42.02:0,42,384	0/0:22,0:22:53.98:0,54,487	1/1:1,21:22:60.14:678,60,0	0/1:1,4:5:12.45:111,0,12	0/0:23,0:23:63.02:0,63,572	0/0:31,0:31:84.03:0,84,768	0/0:27,0:27:72.01:0,72,654	0/0:26,0:26:60.32:0,60,594	0/0:19,0:19:53.93:0,54,479	0/0:15,0:15:45.02:0,45,412	0/0:30,0:30:84.04:0,84,765	0/0:20,0:20:54.01:0,54,491	0/0:26,0:26:75.03:0,75,686	0/0:8,0:8:24.01:0,24,220
chr10	28289390	.	T	TA	1110.55	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-8.306;DP=647;FS=4.221;HRun=7;HaplotypeScore=59.8740;InbreedingCoeff=0.9946;MQ=80.03;MQ0=0;MQRankSum=-2.213;QD=25.83;ReadPosRankSum=1.947;VQSLOD=4.4528;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,108,1043	0/0:11,0:11:33.05:0,33,319	0/0:23,0:22:50.99:0,51,471	0/0:14,0:14:25.85:0,26,237	0/0:21,0:21:54.08:0,54,521	0/0:33,0:33:84.12:0,84,811	0/0:12,0:12:30.02:0,30,283	0/0:36,0:36:93.11:0,93,885	0/0:24,0:24:60.08:0,60,579	0/0:34,0:34:84.12:0,84,808	0/0:20,0:20:57.09:0,57,550	0/0:16,0:16:45.05:0,45,428	0/0:23,0:23:48.07:0,48,464	0/0:26,0:26:72.11:0,72,695	0/0:25,0:25:60.09:0,60,579	0/0:22,0:22:63.09:0,63,603	1/1:2,25:27:66.20:797,66,0	1/1:1,15:16:36.11:435,36,0	0/0:17,0:17:45.07:0,45,434	0/0:27,0:27:69.10:0,69,666	0/0:38,0:38:99:0,102,985	0/0:29,0:29:87.09:0,87,825	0/0:18,0:18:51.06:0,51,486	0/0:15,0:15:42.05:0,42,399	0/0:22,0:22:60.09:0,60,579	0/0:22,0:22:57.06:0,57,544	0/0:29,0:29:78.09:0,78,741	0/0:6,0:6:18.03:0,18,174
chr10	28294178	.	A	AAAAGGACTCGGC	911.62	PASS	AB=1.000;AC=6;AF=0.107;AN=56;BaseQRankSum=5.572;DP=384;FS=20.014;HRun=0;HaplotypeScore=132.6306;InbreedingCoeff=0.5430;MQ=71.78;MQ0=0;MQRankSum=0.799;QD=37.98;ReadPosRankSum=-1.779;VQSLOD=1.2089;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:78.25:0,78,2768	0/0:9,0:9:27.09:0,27,985	0/1:6,0:6:40.95:41,0,195	0/1:11,0:11:75.12:75,0,277	0/0:23,0:23:60.21:0,60,2145	0/0:14,0:14:42.14:0,42,1576	0/0:8,0:8:24.08:0,24,951	0/0:34,0:33:87.28:0,87,3303	0/0:19,0:19:51.18:0,51,1927	0/0:22,0:22:66.22:0,66,2231	0/0:11,0:11:33.11:0,33,1298	0/0:7,0:7:21.07:0,21,645	0/0:17,0:17:42.14:0,42,1621	0/0:8,0:8:24.08:0,24,879	0/0:13,0:13:39.13:0,39,1295	0/0:12,0:12:36.12:0,36,1386	1/1:0,3:5:9.03:538,9,0	1/1:0,2:2:6.02:380,6,0	0/0:13,0:13:39.13:0,39,1426	0/0:17,0:17:51.16:0,51,1838	0/0:7,0:7:21.07:0,21,698	0/0:10,0:10:30.10:0,30,974	0/0:8,0:8:21.07:0,21,824	0/0:9,0:9:24.08:0,24,926	0/0:18,0:18:45.15:0,45,1737	0/0:22,0:22:60.21:0,60,2310	0/0:20,0:20:60.21:0,60,2221	0/0:13,0:13:39.13:0,39,1545
chr10	28294277	.	AT	A	606.75	PASS	AB=1.000;AC=42;AF=0.750;AN=56;BaseQRankSum=4.968;DP=255;FS=5.219;HRun=1;HaplotypeScore=87.6209;InbreedingCoeff=0.3615;MQ=51.20;MQ0=0;MQRankSum=-6.873;QD=2.77;ReadPosRankSum=6.790;VQSLOD=-0.4263;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,0:9:9.22:25,9,0	1/1:9,0:9:15.44:42,15,0	0/0:4,0:4:6.70:0,7,69	0/0:3,0:3:7.15:0,7,40	0/1:25,0:25:0.24:43,0,0	1/1:5,0:5:7.32:31,7,0	0/0:4,0:4:0.37:0,0,39	0/0:19,0:19:2.80:0,3,96	1/1:5,0:5:7.63:32,8,0	0/1:17,0:17:8.35:8,0,35	1/1:14,0:14:21.84:70,22,0	1/1:6,0:6:8.88:36,9,0	1/1:6,4:10:9.84:40,10,0	1/1:9,0:9:8.78:37,9,0	1/1:7,0:7:10.12:38,10,0	1/1:7,0:7:6.04:29,6,0	1/1:1,0:1:1.55:4,2,0	1/1:1,0:1:0.47:1,0,0	0/0:6,0:6:3.57:0,4,28	1/1:19,1:19:5.35:76,5,0	1/1:2,0:2:0.89:2,1,0	1/1:8,0:7:10.73:28,11,0	1/1:14,0:14:25.95:84,26,0	1/1:5,0:5:2.96:20,3,0	1/1:16,0:16:6.46:47,6,0	0/1:12,0:12:14.73:28,0,15	0/1:8,0:8:5.07:5,0,32	1/1:9,0:8:11.63:28,12,0
chr10	28295995	.	AAC	A	1899.84	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.478;DP=677;FS=6.696;HRun=0;HaplotypeScore=81.1410;InbreedingCoeff=0.9994;MQ=85.97;MQ0=0;MQRankSum=-2.159;QD=41.30;ReadPosRankSum=2.958;VQSLOD=5.2335;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:62,0:62:99:0,187,3579	0/0:9,0:9:27.09:0,27,522	0/0:21,0:21:63.06:0,63,1050	0/0:27,0:27:81.26:0,81,1452	0/0:27,0:27:78.27:0,78,1507	0/0:29,0:29:84.29:0,84,1622	0/0:20,0:20:60.18:0,60,1124	0/0:25,0:25:72.25:0,72,1381	0/0:26,0:26:78.27:0,78,1506	0/0:35,0:35:99:0,105,2017	0/0:22,0:22:66.23:0,66,1251	0/0:19,0:19:57.20:0,57,1100	0/0:17,0:17:51.13:0,51,947	0/0:25,0:25:75.24:0,75,1391	0/0:25,0:25:75.26:0,75,1449	0/0:22,0:22:66.23:0,66,1239	1/1:1,31:32:90.31:1378,90,0	1/1:0,14:14:42.14:643,42,0	0/0:23,0:23:66.21:0,66,1196	0/0:19,0:19:54.19:0,54,1043	0/0:30,0:30:90.29:0,90,1693	0/0:16,0:16:48.16:0,48,926	0/0:19,0:19:57.20:0,57,1096	0/0:33,0:33:99:0,99,1896	0/0:18,0:18:54.19:0,54,1043	0/0:22,0:22:60.19:0,60,1120	0/0:25,0:25:75.26:0,75,1449	0/0:15,0:15:45.15:0,45,869
chr10	28300514	.	GA	G	7397.51	PASS	AB=1.000;AC=49;AF=0.907;AN=54;BaseQRankSum=3.777;DP=404;FS=9.442;HRun=7;HaplotypeScore=83.1619;InbreedingCoeff=0.8536;MQ=44.68;MQ0=19;MQRankSum=-3.506;QD=20.21;ReadPosRankSum=1.664;VQSLOD=3.9460;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,14:17:36.07:366,36,0	1/1:3,3:6:12.03:122,12,0	./.	0/1:4,0:2:0:0,0,0	1/1:8,20:27:54.11:548,54,0	1/1:4,9:12:27.06:273,27,0	1/1:4,5:8:12.02:121,12,0	1/1:3,9:9:27.06:275,27,0	1/1:3,8:11:25.97:259,26,0	1/1:10,9:18:36.04:355,36,0	1/1:4,14:18:36.05:361,36,0	1/1:8,6:14:24.04:244,24,0	1/1:6,12:17:27.78:300,28,0	1/1:6,5:10:18.01:174,18,0	1/1:3,10:12:30.05:298,30,0	1/1:4,9:12:30.06:305,30,0	0/0:16,0:15:45.09:0,45,535	0/0:19,0:19:51.10:0,51,609	1/1:12,5:9:24.02:235,24,0	1/1:6,18:24:69.15:702,69,0	1/1:4,3:6:6.01:60,6,0	1/1:6,14:19:45.08:449,45,0	1/1:7,13:19:36.06:358,36,0	1/1:5,9:13:27.02:264,27,0	1/1:3,5:8:24.05:244,24,0	1/1:5,16:21:51.10:512,51,0	1/1:10,8:16:39.06:388,39,0	1/1:5,4:9:18.04:183,18,0
chr10	28300531	.	A	AG	9927.88	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=2.125;DP=413;FS=10.920;HRun=0;HaplotypeScore=100.7143;InbreedingCoeff=0.9168;MQ=62.43;MQ0=9;MQRankSum=-5.677;QD=29.64;ReadPosRankSum=0.971;VQSLOD=3.9502;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,14:19:50.58:616,51,0	1/1:3,1:4:12.01:131,12,0	0/0:24,0:15:22.86:0,23,175	0/0:18,0:12:17.65:0,18,162	1/1:12,17:29:74.53:872,75,0	1/1:6,9:15:38.83:436,39,0	1/1:0,5:5:15.05:201,15,0	1/1:9,9:17:50.97:550,51,0	1/1:4,4:8:5.28:208,5,0	1/1:9,11:20:48.10:618,48,0	1/1:7,12:19:47.13:509,47,0	1/1:3,6:9:26.68:332,27,0	1/1:7,9:15:34.52:423,35,0	1/1:6,2:7:15.01:155,15,0	1/1:6,4:10:20.96:227,21,0	1/1:7,7:13:35.84:388,36,0	0/0:16,0:15:45.13:0,45,589	0/0:20,0:20:51.92:0,52,690	1/1:6,6:9:24.07:325,24,0	1/1:8,13:21:62.95:732,63,0	1/1:3,2:5:6.02:81,6,0	1/1:5,11:16:44.83:494,45,0	1/1:8,12:20:50.96:599,51,0	1/1:5,7:11:23.82:270,24,0	1/1:7,3:10:24.03:293,24,0	1/1:7,19:26:72.12:876,72,0	1/1:3,7:9:27.06:330,27,0	1/1:2,5:7:21:261,21,0
chr10	28300550	.	T	TAA	8723.59	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-2.547;DP=396;FS=2.202;HRun=10;HaplotypeScore=108.4629;InbreedingCoeff=0.6679;MQ=72.19;MQ0=0;MQRankSum=-4.506;QD=24.85;ReadPosRankSum=2.595;VQSLOD=4.6934;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,22:28:47.64:654,48,0	1/1:0,2:2:6.02:89,6,0	0/0:26,0:17:11.57:0,12,77	0/0:19,0:15:12.47:0,12,110	1/1:11,18:30:58.36:800,58,0	1/1:2,14:16:42.14:624,42,0	1/1:3,5:8:15.05:223,15,0	1/1:6,10:18:7.58:426,8,0	1/1:2,4:6:12.04:179,12,0	1/1:7,12:19:8.59:484,9,0	1/1:7,9:17:30.40:405,30,0	1/1:4,4:8:9.03:134,9,0	1/1:1,4:7:14.54:187,15,0	1/1:3,3:6:9.03:134,9,0	1/1:3,3:6:9.03:134,9,0	1/1:1,7:9:23.57:322,24,0	1/1:2,0:19:9.80:101,10,0	1/1:4,0:17:4.93:84,5,0	1/1:4,12:16:36.12:536,36,0	1/1:6,12:18:36.12:536,36,0	1/1:3,3:6:9.03:128,9,0	1/1:6,9:16:30.83:413,31,0	1/1:4,13:18:42.10:600,42,0	1/1:1,7:8:18.06:268,18,0	1/1:6,6:13:20.56:271,21,0	1/1:9,13:23:41.63:590,42,0	1/1:3,4:8:12.04:178,12,0	1/1:3,5:8:15.05:224,15,0
chr10	28300661	.	G	GA	1626.35	PASS	AB=0.900;AC=53;AF=0.946;AN=56;BaseQRankSum=1.472;DP=408;FS=10.647;HRun=14;HaplotypeScore=108.8717;InbreedingCoeff=0.2118;MQ=47.94;MQ0=16;MQRankSum=-3.929;QD=4.10;ReadPosRankSum=-0.798;VQSLOD=0.6859;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:23:18.61:84,19,0	1/1:6,0:6:6.57:31,7,0	0/0:11,0:4:11.10:0,11,64	0/1:8,1:6:16.90:17,0,21	1/1:24,0:23:30.33:151,30,0	1/1:11,0:11:6.79:29,7,0	1/1:14,0:12:17:83,17,0	1/1:28,0:22:23.78:120,24,0	1/1:6,0:6:8.48:42,8,0	1/1:16,0:15:14.14:71,14,0	1/1:22,0:21:10.33:46,10,0	1/1:7,0:7:2.88:15,3,0	1/1:8,0:8:5.68:28,6,0	1/1:12,0:11:5.59:26,6,0	1/1:12,0:12:6.61:32,7,0	1/1:8,0:8:6.89:31,7,0	1/1:11,24:36:5.67:322,6,0	1/1:10,6:16:21:185,21,0	1/1:12,0:10:14.16:70,14,0	1/1:21,0:21:10.64:52,11,0	1/1:7,0:5:5.52:25,6,0	1/1:12,0:12:2.84:15,3,0	1/1:10,0:10:4.61:18,5,0	1/1:7,0:7:2.88:15,3,0	1/1:17,0:17:19.62:87,20,0	1/1:13,0:13:6.25:34,6,0	1/1:27,0:27:16:77,16,0	1/1:9,0:8:6.57:31,7,0
chr10	28300672	.	A	AAAAAAAAAAAAAAG	24541.66	PASS	AB=1.000;AC=49;AF=0.875;AN=56;BaseQRankSum=-0.842;DP=435;FS=49.525;HRun=0;HaplotypeScore=194.1784;InbreedingCoeff=0.7745;MQ=55.02;MQ0=4;MQRankSum=-7.060;QD=63.58;ReadPosRankSum=-4.388;VQSLOD=2.3988;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:19:44.20:1489,44,0	1/1:4,1:11:12.04:593,12,0	0/0:9,0:5:15.04:0,15,275	0/0:10,0:9:17.96:0,18,254	1/1:32,0:30:74.88:2018,75,0	1/1:10,0:10:26.75:926,27,0	1/1:14,0:14:33.08:1329,33,0	1/1:33,0:31:72.05:1759,72,0	1/1:8,0:7:21.04:718,21,0	1/1:11,0:18:44.61:1390,45,0	1/1:16,0:15:45.13:1499,45,0	1/1:6,0:6:11.98:215,12,0	1/1:8,0:8:18.03:611,18,0	1/1:7,0:9:12.02:431,12,0	1/1:13,0:13:35.99:759,36,0	1/1:7,0:7:15.03:437,15,0	0/0:30,0:30:56.79:0,57,1346	0/1:18,0:18:70.67:71,0,488	1/1:17,0:16:32.97:1056,33,0	1/1:12,0:24:43.95:1328,44,0	1/1:6,0:5:12:244,12,0	1/1:7,0:16:17.97:524,18,0	1/1:6,0:12:18:602,18,0	1/1:11,0:11:27.48:649,27,0	1/1:15,0:16:45.13:1764,45,0	1/1:10,0:23:55.07:1352,55,0	1/1:23,0:23:64.74:2301,65,0	1/1:9,1:12:11.53:474,12,0
chr10	28304630	.	C	CTATGGTGTGGGATGGTGTGGT	4031.14	PASS	AB=0.750;AC=28;AF=0.875;AN=32;BaseQRankSum=0.303;DP=61;FS=32.617;HRun=0;HaplotypeScore=108.7904;InbreedingCoeff=-0.0377;MQ=107.30;MQ0=0;MQRankSum=-2.179;QD=69.50;ReadPosRankSum=2.124;VQSLOD=1.3842;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,0:8:6.01:111,6,0	./.	0/1:3,0:4:33.04:110,0,33	0/1:4,1:7:48.64:756,0,49	./.	./.	1/1:6,0:6:9.03:393,9,0	1/1:2,0:2:6.01:139,6,0	./.	1/1:3,0:3:6.02:417,6,0	./.	1/1:2,0:2:6.02:503,6,0	./.	1/1:3,0:3:6.02:309,6,0	1/1:4,0:4:0.89:2,1,0	./.	./.	1/1:1,0:1:3.01:275,3,0	./.	./.	1/1:10,0:10:9.50:258,10,0	./.	0/0:1,0:1:0:0,0,0	1/1:1,0:1:3.01:73,3,0	1/1:1,0:1:3.01:71,3,0	1/1:3,0:3:6.02:357,6,0	1/1:3,0:3:3.01:257,3,0	./.
chr10	28308699	.	T	TTATAAAATA	10761.98	PASS	AB=0.791;AC=25;AF=0.463;AN=54;BaseQRankSum=-1.170;DP=310;FS=50.092;HRun=0;HaplotypeScore=88.9078;InbreedingCoeff=-0.7811;MQ=56.85;MQ0=0;MQRankSum=-4.808;QD=36.36;ReadPosRankSum=-2.357;VQSLOD=2.3014;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:7,0:14:99:480,0,252	0/1:3,1:5:99:139,0,276	0/0:3,0:3:4.83:0,5,79	0/0:4,0:4:5.97:0,6,50	0/1:11,0:12:99:175,0,490	0/1:14,0:18:66.74:67,0,1139	0/1:1,3:5:85.69:441,0,86	0/1:40,13:55:99:2987,0,2347	0/1:3,0:3:15.96:16,0,174	0/1:8,4:12:99:619,0,531	0/1:8,3:13:99:275,0,527	0/1:3,1:4:99:134,0,274	0/1:5,2:7:99:389,0,234	0/1:3,2:5:99:139,0,200	0/1:7,4:12:99:278,0,405	0/1:13,0:13:99:333,0,446	0/1:11,10:22:99:1511,0,404	0/0:2,0:2:6.02:0,6,148	0/1:12,8:20:99:1233,0,740	0/1:7,1:9:99:200,0,485	./.	0/1:2,0:2:19.97:20,0,71	0/1:8,1:9:99:112,0,530	1/1:3,0:3:3.01:51,3,0	0/1:5,0:10:99:237,0,354	0/1:8,1:9:99:114,0,656	0/1:12,0:16:99:294,0,892	0/1:13,5:18:99:517,0,948
chr10	28310758	.	A	AC	15907.09	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-2.010;DP=644;FS=2.366;HRun=2;HaplotypeScore=118.2580;InbreedingCoeff=0.9884;MQ=90.25;MQ0=0;MQRankSum=-6.479;QD=29.90;ReadPosRankSum=4.003;VQSLOD=4.5239;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,51:57:99:1729,136,0	1/1:2,9:11:26.45:319,26,0	0/0:24,0:23:48.16:0,48,606	0/0:28,0:28:74.31:0,74,840	1/1:3,17:20:37.59:520,38,0	1/1:0,25:25:72.23:933,72,0	1/1:3,18:21:49.04:621,49,0	1/1:10,17:27:50.60:593,51,0	1/1:1,21:22:60.19:769,60,0	1/1:4,16:20:40.30:456,40,0	1/1:2,14:16:23.68:312,24,0	1/1:3,20:23:53.04:715,53,0	1/1:3,21:24:58.70:776,59,0	1/1:0,25:25:63.20:805,63,0	1/1:0,28:28:84.27:1088,84,0	1/1:1,21:22:60.19:778,60,0	0/0:37,0:37:92.74:0,93,512	0/0:23,0:23:63.45:0,63,344	1/1:6,16:22:19.26:506,19,0	1/1:2,14:17:33.48:385,33,0	1/1:5,22:27:57.18:737,57,0	1/1:1,22:23:60.67:780,61,0	1/1:3,15:18:32.28:417,32,0	1/1:1,30:31:81.26:1051,81,0	1/1:0,11:11:27.09:351,27,0	1/1:5,16:21:39.12:493,39,0	1/1:0,17:17:48.15:623,48,0	1/1:0,4:4:12.04:151,12,0
chr10	28312016	.	GTATA	G	1926.09	PASS	AC=40;AF=0.909;AN=44;BaseQRankSum=0.715;DP=229;FS=0.000;HRun=0;HaplotypeScore=47.9036;InbreedingCoeff=0.3338;MQ=63.54;MQ0=5;MQRankSum=1.963;QD=11.33;ReadPosRankSum=1.567;VQSLOD=1.8805;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,1:10:2.66:46,3,0	1/1:1,1:2:3.01:47,3,0	./.	./.	1/1:5,2:7:6.02:94,6,0	1/1:5,5:10:15.05:236,15,0	./.	1/1:21,2:23:8.93:121,9,0	1/1:4,1:5:3.01:47,3,0	1/1:9,0:10:9.02:91,9,0	1/1:12,3:15:8.53:100,9,0	1/1:4,0:4:3.01:47,3,0	1/1:5,2:8:9.02:118,9,0	1/1:6,2:9:5.88:94,6,0	./.	1/1:4,2:6:6.02:94,6,0	0/0:10,0:12:6.02:0,6,117	0/0:9,0:9:8.92:0,9,76	1/1:5,2:7:6.49:91,6,0	1/1:5,2:7:6.02:94,6,0	1/1:1,3:4:3.01:47,3,0	./.	./.	1/1:0,1:1:3.01:46,3,0	1/1:6,3:9:9.03:141,9,0	1/1:2,6:8:18.03:235,18,0	1/1:10,1:13:9.02:103,9,0	1/1:8,4:12:9.03:141,9,0
chr10	28313480	.	TA	T	401.56	PASS	AB=0.938;AC=5;AF=0.089;AN=56;BaseQRankSum=5.933;DP=528;FS=8.060;HRun=10;HaplotypeScore=52.1071;InbreedingCoeff=0.7619;MQ=74.82;MQ0=0;MQRankSum=-1.993;QD=10.30;ReadPosRankSum=0.852;VQSLOD=1.8463;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:42.11:0,42,465	0/0:12,0:12:10.04:0,10,339	0/1:14,1:14:2.33:2,0,166	0/0:14,0:14:14.17:0,14,185	0/0:23,0:23:63.16:0,63,688	0/0:29,0:29:78.20:0,78,856	0/0:20,0:20:54.15:0,54,597	0/0:26,0:26:57.15:0,57,623	0/0:19,0:19:48.13:0,48,531	0/0:20,0:20:57.15:0,57,630	0/0:25,0:25:66.17:0,66,723	0/0:14,1:15:8.84:0,9,304	0/0:24,1:25:43.12:0,43,693	0/0:20,0:20:51.11:0,51,541	0/0:25,0:25:63.17:0,63,696	0/0:19,0:19:48.13:0,48,531	1/1:1,16:17:41.98:364,42,0	1/1:0,7:7:18:156,18,0	0/0:21,0:21:56.72:0,57,592	0/0:31,0:31:87.23:0,87,959	0/0:16,0:16:45.12:0,45,498	0/0:18,0:18:44.94:0,45,470	0/0:23,0:23:54.75:0,55,627	0/0:7,0:7:21.06:0,21,232	0/0:17,0:17:42.09:0,42,454	0/0:21,0:21:54.14:0,54,590	0/0:25,0:25:69.17:0,69,749	0/0:2,0:2:6.02:0,6,66
chr10	28314590	.	AT	A	1016.88	PASS	AB=0.907;AC=6;AF=0.107;AN=56;BaseQRankSum=7.607;DP=691;FS=5.860;HRun=10;HaplotypeScore=75.7397;InbreedingCoeff=0.6765;MQ=80.87;MQ0=0;MQRankSum=-0.193;QD=11.17;ReadPosRankSum=1.204;VQSLOD=3.1107;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:90.13:0,90,967	0/1:10,1:11:1.99:2,0,201	0/1:22,3:25:58.67:59,0,247	0/0:18,1:19:16.08:0,16,281	0/0:28,0:31:77.84:0,78,811	0/0:26,0:26:57.15:0,57,623	0/0:26,0:26:69.19:0,69,763	0/0:26,1:27:63.16:0,63,690	0/0:22,0:24:56.81:0,57,585	0/0:20,0:20:54.14:0,54,591	0/0:18,0:18:48.11:0,48,516	0/0:22,0:22:45.51:0,46,556	0/0:28,0:28:68.91:0,69,733	0/0:22,0:22:60.09:0,60,634	0/0:25,0:26:62.99:0,63,671	0/0:30,0:30:65.31:0,65,887	1/1:3,26:29:41.80:592,42,0	1/1:3,22:25:56.99:495,57,0	0/0:16,0:17:35.92:0,36,371	0/0:30,1:32:58:0,58,844	0/0:24,0:24:54.12:0,54,580	0/0:20,0:20:54.14:0,54,590	0/0:33,0:33:78.15:0,78,832	0/0:20,0:20:60.16:0,60,664	0/0:22,1:24:33.94:0,34,586	0/0:39,2:41:47.15:0,47,976	0/0:22,0:24:62.84:0,63,659	0/0:11,0:11:24.05:0,24,258
chr10	28315359	.	GT	G	6156.28	PASS	AC=52;AF=0.963;AN=54;DP=393;FS=0.000;HRun=11;HaplotypeScore=60.5973;InbreedingCoeff=0.5162;MQ=45.98;MQ0=37;QD=16.64;VQSLOD=5.5037;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,15:15:40.93:318,41,0	1/1:2,5:6:14.98:122,15,0	./.	0/0:9,0:4:0:0,0,0	1/1:1,14:15:23.86:196,24,0	1/1:1,13:14:20.97:172,21,0	1/1:4,14:16:29.94:244,30,0	1/1:6,14:16:32.89:266,33,0	1/1:1,7:8:11.97:98,12,0	1/1:4,17:21:53.87:439,54,0	1/1:0,10:10:20.97:171,21,0	1/1:2,16:18:35.79:284,36,0	1/1:0,21:20:47.85:393,48,0	1/1:2,7:9:14.97:123,15,0	1/1:1,15:16:35.95:293,36,0	1/1:2,11:13:29.95:245,30,0	1/1:2,16:15:32:252,32,0	1/1:2,9:11:23.77:185,24,0	1/1:5,6:10:17.94:148,18,0	1/1:1,10:11:29.96:246,30,0	1/1:0,10:7:17.98:147,18,0	1/1:1,10:11:17.94:147,18,0	1/1:2,12:13:29.94:244,30,0	1/1:0,13:13:26.97:221,27,0	1/1:1,10:10:26.96:220,27,0	1/1:1,15:12:32.95:269,33,0	1/1:1,28:29:74.82:614,75,0	1/1:3,4:7:11.89:98,12,0
chr10	28317331	.	A	AAACAACAAC	47485.87	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-4.549;DP=637;FS=0.000;HRun=0;HaplotypeScore=176.7701;InbreedingCoeff=0.9772;MQ=66.26;MQ0=2;MQRankSum=-8.522;QD=83.16;ReadPosRankSum=5.150;VQSLOD=4.6391;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:13,16:29:42.14:1920,42,0	1/1:3,5:8:18.04:726,18,0	0/0:33,0:28:48.05:0,48,1155	0/0:33,0:26:45.15:0,45,1110	1/1:8,23:31:75.15:3087,75,0	1/1:11,19:33:54.18:2515,54,0	1/1:12,11:24:36.12:1568,36,0	1/1:20,9:34:75.24:2799,75,0	1/1:9,15:26:48.16:2166,48,0	1/1:10,19:30:66.22:2852,66,0	1/1:14,13:26:51.17:2263,51,0	1/1:5,14:19:42.14:1863,42,0	1/1:9,12:22:45.63:2040,46,0	1/1:5,14:20:42.14:1962,42,0	1/1:8,15:23:45.15:2106,45,0	1/1:5,12:17:45.15:2094,45,0	1/1:8,8:14:27.09:1255,27,0	1/1:3,7:10:24.08:1009,24,0	1/1:19,3:22:30.09:1135,30,0	1/1:7,20:27:51.17:2181,51,0	1/1:6,7:14:30.10:1353,30,0	1/1:7,11:21:48.16:1940,48,0	1/1:5,11:20:33.11:1459,33,0	1/1:9,8:17:30.10:1167,30,0	1/1:8,12:21:39.13:1810,39,0	1/1:14,18:33:63.18:2388,63,0	1/1:13,9:22:27.09:1265,27,0	1/1:1,4:5:12.04:563,12,0
chr10	28317367	.	CAGAG	C	575.52	PASS	AB=0.974;AC=10;AF=0.192;AN=52;BaseQRankSum=0.683;DP=598;FS=1.760;HRun=0;HaplotypeScore=218.8423;InbreedingCoeff=0.2164;MQ=55.97;MQ0=23;MQRankSum=-0.875;QD=3.64;ReadPosRankSum=0.279;VQSLOD=2.3746;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:23.93:0,24,435	./.	./.	0/0:40,0:16:0:0,0,0	0/1:25,0:25:22.92:23,0,99	0/0:19,0:21:18.03:0,18,291	0/1:17,0:17:10.69:11,0,186	0/1:34,0:34:50.16:50,0,55	0/0:24,0:25:21.04:0,21,323	0/0:21,0:21:26:0,26,381	0/0:28,0:28:22.66:0,23,301	0/0:19,0:21:44.28:0,44,738	0/0:22,0:22:29.99:0,30,493	0/0:17,0:17:15.04:0,15,275	0/0:21,0:23:32.83:0,33,620	0/0:19,0:19:16.87:0,17,263	0/0:17,0:14:6.88:0,7,81	0/0:7,0:11:24.08:0,24,434	0/0:22,0:21:18.74:0,19,326	0/1:12,1:13:54.20:54,0,159	0/0:20,0:20:18.19:0,18,247	0/0:26,0:26:21.99:0,22,385	0/0:17,0:17:12.51:0,13,250	0/1:25,0:23:10.81:11,0,582	0/0:18,0:18:2.82:0,3,321	0/1:19,1:18:21.37:92,0,21	1/1:8,7:14:26.12:376,26,0	1/1:8,0:7:8.90:103,9,0
chr10	28318028	.	AT	A	8663.74	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=2.303;DP=426;FS=0.608;HRun=9;HaplotypeScore=42.2419;InbreedingCoeff=0.9433;MQ=70.52;MQ0=0;MQRankSum=-0.851;QD=23.54;ReadPosRankSum=2.016;VQSLOD=5.3935;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,23:23:57.03:521,57,0	1/1:0,3:3:9:82,9,0	0/0:14,0:11:15.03:0,15,160	0/0:11,0:9:6.47:0,6,92	1/1:1,15:16:44.91:394,45,0	1/1:4,25:29:48.40:606,48,0	1/1:1,13:14:33.02:302,33,0	1/1:3,21:24:63.03:577,63,0	1/1:2,16:18:45.02:412,45,0	1/1:3,15:18:21.72:379,22,0	1/1:0,12:12:35.94:319,36,0	1/1:1,12:13:35.77:329,36,0	1/1:1,11:12:33.02:302,33,0	1/1:0,18:18:45.02:412,45,0	1/1:0,13:13:33.02:302,33,0	1/1:0,16:16:45.02:412,45,0	0/0:21,0:21:60.10:0,60,648	0/0:12,0:12:36.11:0,36,415	1/1:4,18:22:54:491,54,0	1/1:1,18:19:50.99:459,51,0	1/1:1,7:8:18.01:165,18,0	1/1:0,6:6:17.96:156,18,0	1/1:1,6:7:18.01:165,18,0	1/1:3,12:15:30.01:275,30,0	1/1:1,8:9:24.01:220,24,0	1/1:2,18:20:53.95:480,54,0	1/1:0,21:21:63.03:577,63,0	1/1:0,12:12:36.02:329,36,0
chr10	28318951	.	CAA	C	10901.19	PASS	AB=1.000;AC=49;AF=0.875;AN=56;BaseQRankSum=1.394;DP=551;FS=8.166;HRun=12;HaplotypeScore=74.1281;InbreedingCoeff=0.8282;MQ=66.34;MQ0=3;MQRankSum=-0.216;QD=21.50;ReadPosRankSum=4.362;VQSLOD=4.0715;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,22:24:62.62:674,63,0	1/1:1,7:8:18.04:183,18,0	0/0:10,0:9:17.87:0,18,163	0/1:6,0:5:23.32:23,0,44	1/1:2,24:27:59.83:662,60,0	1/1:1,16:17:42.10:427,42,0	1/1:4,16:20:42.05:427,42,0	1/1:10,9:19:23.92:237,24,0	1/1:5,15:21:35.80:418,36,0	1/1:3,18:21:56.84:555,57,0	1/1:3,23:28:43.21:572,43,0	1/1:3,18:22:18.68:400,19,0	1/1:8,13:23:26.44:306,26,0	1/1:3,12:14:33.06:333,33,0	1/1:1,13:14:36.07:366,36,0	1/1:2,22:24:54.06:538,54,0	0/0:16,0:19:50.61:0,51,649	0/0:13,0:15:36.09:0,36,499	1/1:6,15:22:44.68:492,45,0	1/1:2,19:21:45:458,45,0	1/1:1,13:14:36.06:366,36,0	1/1:6,13:19:23.72:296,24,0	1/1:5,22:27:57.11:580,57,0	1/1:0,11:11:24.05:244,24,0	1/1:8,22:29:57.11:580,57,0	1/1:4,14:18:39.04:397,39,0	1/1:8,27:35:78.10:790,78,0	1/1:1,19:20:57.11:576,57,0
chr10	28320094	.	CTCTGTG	C	10238.75	PASS	AB=0.520;AC=47;AF=0.839;AN=56;BaseQRankSum=1.674;DP=507;FS=10.009;HRun=0;HaplotypeScore=120.2341;InbreedingCoeff=0.7514;MQ=56.29;MQ0=6;MQRankSum=-4.848;QD=24.97;ReadPosRankSum=1.647;VQSLOD=3.7678;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:17,9:28:56.56:843,57,0	1/1:0,11:12:12.04:270,12,0	0/0:18,0:11:26.17:0,26,288	0/0:17,0:8:14.94:0,15,230	1/1:0,11:12:9.03:214,9,0	1/1:0,9:11:15.05:306,15,0	1/1:1,21:22:12.04:231,12,0	1/1:27,3:30:86.53:865,87,0	1/1:1,12:13:12.04:290,12,0	1/1:1,17:20:54.86:775,55,0	1/1:0,14:17:18.06:375,18,0	1/1:0,20:20:14.92:362,15,0	1/1:2,17:19:36.12:832,36,0	1/1:4,7:13:17.28:362,17,0	1/1:2,14:16:15.48:426,15,0	1/1:1,13:16:21.07:448,21,0	0/0:36,0:35:91.49:0,91,2035	0/0:26,0:26:57.91:0,58,1489	1/1:1,24:25:62.75:678,63,0	0/1:1,11:13:30.07:254,0,30	1/1:18,2:17:20.86:265,21,0	1/1:0,6:8:9.03:197,9,0	1/1:0,10:10:8.79:217,9,0	1/1:0,16:16:3.01:72,3,0	1/1:0,11:11:18.06:435,18,0	1/1:2,17:19:44.63:595,45,0	1/1:2,23:25:31.98:659,32,0	1/1:10,1:11:30.25:268,30,0
chr10	28320096	.	C	CTG	683.81	PASS	AB=0.958;AC=9;AF=0.173;AN=52;BaseQRankSum=-7.182;DP=512;FS=0.000;HRun=0;HaplotypeScore=134.8035;InbreedingCoeff=-0.0022;MQ=55.65;MQ0=8;MQRankSum=4.205;QD=3.32;ReadPosRankSum=-3.733;VQSLOD=1.6452;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:28:2.49:2,0,66	0/0:12,0:12:11.36:0,11,55	./.	./.	0/0:12,0:12:8.52:0,9,42	0/0:11,0:11:11.32:0,11,54	0/1:23,0:22:16.06:29,0,16	1/1:33,0:32:12.72:103,13,0	0/0:12,0:12:11.27:0,11,53	0/1:19,0:19:22.65:23,0,35	0/0:17,0:17:16.35:0,16,74	0/0:20,0:20:14.20:0,14,69	0/0:19,0:19:23.51:0,24,123	0/0:13,0:13:18.72:0,19,87	0/0:17,0:17:5.65:0,6,74	0/0:17,0:16:19.84:0,20,97	0/1:24,10:34:99:522,0,121	0/1:24,2:26:99:116,0,210	0/1:25,0:25:10.97:11,0,19	0/0:13,0:13:14.37:0,14,87	0/0:23,0:20:5.31:0,5,27	0/0:9,0:9:8.52:0,9,42	0/0:10,0:10:8.42:0,8,41	0/0:16,0:16:2.84:0,3,14	0/0:11,0:11:17.04:0,17,84	0/1:17,0:17:8.73:9,0,29	0/0:25,0:25:10.16:0,10,106	0/0:11,0:11:2.79:0,3,14
chr10	28321218	.	G	GAC	1363.48	PASS	AB=0.883;AC=36;AF=0.720;AN=50;BaseQRankSum=-3.826;DP=240;FS=14.572;HRun=0;HaplotypeScore=42.3300;InbreedingCoeff=0.0523;MQ=55.76;MQ0=13;MQRankSum=4.635;QD=8.12;ReadPosRankSum=-0.973;VQSLOD=1.4029;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:7,0:10:11.28:19,0,11	./.	0/1:19,0:8:11.48:24,0,11	./.	1/1:2,6:8:5.99:48,6,0	1/1:8,0:7:9.03:142,9,0	1/1:5,0:5:14.96:120,15,0	0/1:30,0:30:99:205,0,158	1/1:5,0:5:3.01:33,3,0	0/1:5,0:5:1.92:94,0,2	0/0:5,7:11:2.74:0,3,12	1/1:1,0:1:3.01:48,3,0	1/1:4,0:4:2.92:17,3,0	1/1:4,0:4:12.01:144,12,0	1/1:3,0:3:6:72,6,0	1/1:7,0:7:6.01:71,6,0	0/0:10,0:10:26.66:0,27,179	0/0:10,0:10:23.68:0,24,155	1/1:5,0:4:8.97:94,9,0	./.	1/1:4,0:4:8.98:72,9,0	0/1:6,0:6:6.66:18,0,7	0/1:8,3:11:3.67:39,0,4	1/1:5,0:4:2.99:24,3,0	1/1:7,0:7:8.03:55,8,0	0/1:3,2:5:12.67:49,0,13	1/1:10,0:9:2.12:95,2,0	0/1:4,0:4:17.95:25,0,18
chr10	28321466	.	AACACACAC	A	4289.20	PASS	AB=0.736;AC=39;AF=0.848;AN=46;BaseQRankSum=0.412;DP=409;FS=1.150;HRun=0;HaplotypeScore=106.7485;InbreedingCoeff=0.3111;MQ=72.13;MQ0=3;MQRankSum=-2.021;QD=14.11;ReadPosRankSum=2.082;VQSLOD=3.7430;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:11,10:22:18.02:341,18,0	./.	./.	./.	1/1:2,5:7:5.93:40,6,0	1/1:6,15:21:15.01:296,15,0	0/1:10,7:17:69.18:191,0,69	1/1:32,0:31:7.32:127,7,0	1/1:10,7:17:18.06:430,18,0	1/1:5,5:10:9.48:161,9,0	./.	1/1:8,11:20:24.08:563,24,0	1/1:6,4:10:8.23:198,8,0	1/1:3,6:9:12.04:282,12,0	1/1:8,2:14:23.89:423,24,0	0/1:7,3:12:19.92:261,0,20	0/0:12,0:26:19.76:0,20,715	0/0:14,0:14:5.51:0,6,127	1/1:13,3:16:2.29:145,2,0	1/1:1,2:3:3.01:38,3,0	0/1:20,6:27:0:0,0,0	1/1:5,0:4:2.97:20,3,0	1/1:3,1:4:3.01:75,3,0	1/1:15,8:23:9.17:222,9,0	1/1:10,0:10:6.41:41,6,0	1/1:5,5:10:10.72:230,11,0	1/1:10,3:14:8.71:206,9,0	./.
chr10	28321469	.	ACACAC	A	1218.40	PASS	AB=0.990;AC=18;AF=0.346;AN=52;BaseQRankSum=10.487;DP=412;FS=28.351;HRun=0;HaplotypeScore=96.3881;InbreedingCoeff=-0.4259;MQ=68.39;MQ0=4;MQRankSum=-8.106;QD=4.72;ReadPosRankSum=1.388;VQSLOD=-0.1521;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:23:99:144,0,194	./.	0/0:29,0:20:60.19:0,60,750	0/0:28,0:22:60.14:0,60,714	1/1:7,0:7:5.93:40,6,0	0/1:21,0:21:99:105,0,186	0/1:17,0:17:57.53:58,0,306	0/1:28,4:31:40.89:41,0,824	0/1:16,0:17:99:138,0,225	0/1:10,0:10:15.64:16,0,216	./.	0/1:18,0:18:99:183,0,150	0/1:10,0:10:41.83:42,0,84	0/1:11,0:10:22.76:96,0,23	0/1:14,0:14:99:118,0,192	0/1:12,0:12:89.28:89,0,134	0/0:27,0:27:42.17:0,42,890	0/0:16,0:16:34.04:0,34,518	0/1:16,0:16:19.03:19,0,344	0/0:3,0:3:2.50:0,2,9	0/0:28,0:27:39.60:0,40,492	0/0:6,0:5:3:0,3,25	0/1:4,0:4:23.30:23,0,32	0/1:22,0:22:87.38:87,0,161	0/0:9,0:9:7.56:0,8,57	0/1:10,0:10:99:115,0,127	0/1:14,0:14:56.65:57,0,199	0/0:2,0:2:6.02:0,6,76
chr10	28321713	.	TCA	T	5501.11	PASS	AC=44;AF=0.815;AN=54;BaseQRankSum=1.023;DP=427;FS=19.415;HRun=0;HaplotypeScore=111.2817;InbreedingCoeff=0.7170;MQ=67.56;MQ0=27;MQRankSum=-5.407;QD=21.83;ReadPosRankSum=4.614;VQSLOD=3.9683;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,1:4:3.01:49,3,0	1/1:0,4:4:5.97:66,6,0	0/0:52,0:20:48.83:0,49,765	0/0:76,0:28:19.07:0,19,856	1/1:5,10:14:12.04:180,12,0	1/1:8,16:22:21.07:330,21,0	1/1:3,3:6:9.03:129,9,0	1/1:2,20:22:57.12:921,57,0	1/1:4,8:11:15.05:227,15,0	1/1:9,14:22:63.19:967,63,0	1/1:4,10:13:18.06:290,18,0	1/1:0,9:9:12.04:166,12,0	1/1:2,5:7:9.03:137,9,0	./.	1/1:4,8:12:8.70:99,9,0	1/1:4,3:7:9.03:139,9,0	0/0:15,0:13:32.77:0,33,483	0/0:14,0:10:18.02:0,18,320	1/1:7,6:11:5.07:377,5,0	1/1:3,8:10:14.41:239,14,0	0/0:3,4:7:0.47:0,0,1	1/1:4,14:18:11.56:183,12,0	1/1:7,8:14:18.06:286,18,0	1/1:3,3:6:6.02:98,6,0	1/1:2,11:11:6:72,6,0	1/1:2,4:6:18.06:277,18,0	1/1:1,6:5:9.02:123,9,0	1/1:4,0:4:9.03:146,9,0
chr10	28321742	.	CT	C	2257.30	PASS	AB=0.725;AC=37;AF=0.804;AN=46;BaseQRankSum=0.906;DP=465;FS=6.362;HRun=2;HaplotypeScore=94.1766;InbreedingCoeff=0.2166;MQ=45.41;MQ0=46;MQRankSum=-2.047;QD=8.72;ReadPosRankSum=2.908;VQSLOD=1.3395;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:1,2:3:0:0,0,0	1/1:1,2:3:5.05:44,5,0	0/0:66,0:13:3.78:0,4,233	0/0:101,1:18:10.82:0,11,376	1/1:11,2:10:2.99:24,3,0	1/1:18,5:20:15.04:177,15,0	./.	1/1:2,15:12:28.64:348,29,0	1/1:9,4:10:9.03:112,9,0	1/1:16,5:18:44.85:502,45,0	1/1:10,4:13:2.98:21,3,0	1/1:6,0:6:8.90:98,9,0	1/1:5,2:7:9.03:114,9,0	./.	1/1:11,3:12:4.78:39,5,0	1/1:3,5:8:6.01:67,6,0	0/1:6,3:7:69.60:104,0,70	0/1:11,2:9:28.41:28,0,65	0/1:12,5:12:10.75:191,0,11	1/1:16,3:17:6.02:80,6,0	./.	1/1:9,9:16:3.01:41,3,0	./.	./.	0/1:6,8:11:0:0,0,0	1/1:11,1:9:21.06:247,21,0	1/1:9,2:8:5.67:66,6,0	1/1:2,2:3:6.02:76,6,0
chr10	28321743	.	T	TC	2618.20	PASS	AB=0.735;AC=35;AF=0.761;AN=46;BaseQRankSum=0.956;DP=460;FS=4.719;HRun=1;HaplotypeScore=90.0071;InbreedingCoeff=0.1963;MQ=44.80;MQ0=47;MQRankSum=-2.364;QD=10.82;ReadPosRankSum=2.884;VQSLOD=2.0024;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:2,1:3:0:0,0,0	1/1:3,0:2:5.05:45,5,0	0/0:65,0:13:6.77:0,7,217	0/0:97,0:17:0.78:0,1,356	./.	1/1:6,14:17:15.05:211,15,0	./.	1/1:20,0:15:30.05:362,30,0	1/1:4,8:9:9.03:122,9,0	1/1:9,12:18:44.98:599,45,0	1/1:5,7:12:2.98:21,3,0	1/1:0,5:5:8.92:118,9,0	1/1:2,4:6:9.02:111,9,0	0/0:4,12:13:0:0,0,0	1/1:5,10:12:4.78:49,5,0	1/1:5,2:7:3.01:39,3,0	0/1:5,3:6:64.38:102,0,64	0/1:8,5:9:33.39:33,0,64	0/1:11,6:12:10.05:346,0,10	1/1:3,13:15:6.02:83,6,0	./.	1/1:11,8:17:3.01:44,3,0	./.	./.	0/1:9,4:11:0:0,0,0	1/1:3,9:9:21.07:289,21,0	1/1:4,8:9:5.68:85,6,0	1/1:3,0:2:6.02:76,6,0
chr10	28321761	.	C	CTGTG	1946.44	PASS	AB=0.978;AC=25;AF=0.658;AN=38;BaseQRankSum=1.811;DP=440;FS=0.000;HRun=0;HaplotypeScore=91.6943;InbreedingCoeff=0.5453;MQ=24.28;MQ0=32;MQRankSum=-1.943;QD=9.01;ReadPosRankSum=-0.108;VQSLOD=2.5411;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:37,0:5:8.98:0,9,114	0/0:76,0:8:11.53:0,12,171	./.	1/1:22,0:20:7.45:30,7,0	./.	1/1:27,0:21:48.12:630,48,0	1/1:13,1:12:3.01:36,3,0	1/1:21,0:20:30.12:345,30,0	./.	1/1:8,1:9:6.47:87,6,0	1/1:6,0:6:2.14:46,2,0	0/1:16,0:13:0:0,0,0	1/1:15,0:12:1.25:3,1,0	0/1:7,1:8:0:0,0,0	0/0:7,0:7:12.04:0,12,195	0/0:9,0:8:15.04:0,15,243	1/1:14,1:12:23.97:342,24,0	0/1:21,0:19:0.21:0,0,0	./.	./.	./.	./.	0/1:12,0:11:0.04:0,0,0	1/1:12,1:9:20.10:286,20,0	0/1:11,0:10:26.53:96,0,27	1/1:6,0:6:13.75:173,14,0
chr10	28321775	.	CTG	C	66.98	PASS	AB=0.948;AC=19;AF=0.500;AN=38;BaseQRankSum=4.062;DP=402;FS=12.807;HRun=0;HaplotypeScore=74.2909;InbreedingCoeff=0.0164;MQ=24.34;MQ0=37;MQRankSum=-1.581;QD=0.29;ReadPosRankSum=-2.609;VQSLOD=-0.7276;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:15,0:2:6.02:0,6,80	0/1:50,0:7:8.11:8,0,157	./.	1/1:16,1:17:2.46:18,2,0	./.	0/0:23,0:16:25.95:0,26,234	1/1:14,1:13:2.92:17,3,0	0/1:18,2:17:22.91:23,0,129	./.	0/1:6,1:7:12.45:12,0,46	0/1:7,0:7:5.06:5,0,11	0/0:13,2:12:0:0,0,0	1/1:13,2:10:0.47:1,0,0	./.	0/1:6,0:6:4.13:4,0,159	0/0:13,0:8:15.02:0,15,248	0/1:18,0:14:23.31:23,0,33	0/1:17,1:16:0.11:1,0,0	./.	1/1:22,0:18:2.84:14,3,0	./.	./.	0/1:11,2:12:0:0,0,0	0/1:14,1:8:20.89:34,0,21	1/1:10,0:9:2.19:20,2,0	0/0:5,1:6:13.97:0,14,61
chr10	28321789	.	G	GTC	788.85	PASS	AB=0.957;AC=24;AF=0.600;AN=40;BaseQRankSum=1.516;DP=406;FS=3.075;HRun=0;HaplotypeScore=59.4752;InbreedingCoeff=0.2855;MQ=23.98;MQ0=57;MQRankSum=-1.073;QD=3.23;ReadPosRankSum=-1.826;VQSLOD=1.4669;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:20,0:9:0:0,0,0	0/0:3,0:1:0.47:0,0,1	0/0:5,0:1:2.98:0,3,21	./.	./.	0/1:22,1:21:0.06:0,0,0	./.	1/1:15,1:13:14.95:210,15,0	./.	0/1:15,1:13:56.96:147,0,57	./.	1/1:7,0:7:5.04:36,5,0	1/1:7,1:8:2.22:14,2,0	1/1:20,0:16:0.41:0,0,0	./.	1/1:13,0:8:3.01:32,3,0	0/0:15,0:11:8.68:0,9,110	0/0:16,0:9:11.98:0,12,137	1/1:15,0:10:8.75:100,9,0	0/1:15,3:15:0:0,0,0	./.	1/1:15,1:13:2.74:12,3,0	./.	0/1:18,0:7:0:0,0,0	0/1:16,2:16:0.19:0,0,0	1/1:19,0:8:11.16:127,11,0	0/1:9,0:9:14.37:64,0,14	0/1:8,0:8:2.31:158,0,2
chr10	28321797	.	CTG	C	540.14	PASS	AB=0.929;AC=18;AF=0.450;AN=40;BaseQRankSum=1.230;DP=414;FS=2.921;HRun=0;HaplotypeScore=50.9956;InbreedingCoeff=0.1244;MQ=23.73;MQ0=62;MQRankSum=-0.705;QD=3.31;ReadPosRankSum=-2.740;VQSLOD=1.3233;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,2:12:0:0,0,0	0/1:2,1:1:0:0,0,0	0/0:2,0:1:2.97:0,3,20	./.	./.	0/0:24,0:21:0.47:0,0,1	./.	1/1:14,0:12:26.37:179,26,0	./.	0/1:18,1:16:66.89:67,0,95	./.	0/0:5,1:6:2.44:0,2,7	1/1:6,1:7:3.49:35,3,0	0/0:19,2:17:0.47:0,0,1	./.	0/0:14,0:9:0.47:0,0,1	0/1:19,0:11:20.92:21,0,47	0/1:18,0:10:3.91:4,0,47	1/1:15,0:9:17.47:115,17,0	1/1:17,1:15:0.32:1,0,0	./.	1/1:16,0:13:2.99:23,3,0	./.	0/0:24,1:9:0:0,0,0	0/0:17,2:17:0:0,0,0	1/1:17,0:6:14.10:89,14,0	0/1:10,0:10:7.11:42,0,7	0/1:6,1:7:40.32:68,0,40
chr10	28321850	.	TCACACACACACACACACACACACACACACACACA	T	619.15	PASS	AB=0.887;AC=8;AF=0.364;AN=22;BaseQRankSum=2.014;DP=372;FS=6.368;HRun=0;HaplotypeScore=85.6012;InbreedingCoeff=0.4059;MQ=19.82;MQ0=127;MQRankSum=-1.545;QD=8.60;ReadPosRankSum=-1.545;VQSLOD=0.2045;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	1/1:17,3:16:1.36:3,1,0	0/0:8,0:4:0.47:0,0,1	./.	0/0:17,0:14:0:0,0,0	./.	./.	0/1:10,1:8:0:0,0,0	./.	0/1:10,0:10:1.18:193,0,1	./.	./.	./.	0/0:22,0:9:11.25:0,11,215	0/0:22,0:8:11.25:0,11,824	./.	./.	./.	1/1:13,0:7:3.01:33,3,0	./.	./.	./.	1/1:13,1:9:5.94:474,6,0	0/0:7,0:5:3.44:0,3,21	0/0:12,0:7:3.01:0,3,241
chr10	28322967	.	CAGAT	C	26124.03	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-0.432;DP=660;FS=7.119;HRun=0;HaplotypeScore=130.3490;InbreedingCoeff=0.9985;MQ=88.71;MQ0=2;MQRankSum=-9.086;QD=46.24;ReadPosRankSum=4.790;VQSLOD=5.3920;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,47:49:99:2430,132,0	1/1:0,8:8:21.07:398,21,0	0/0:28,0:29:31.34:0,31,1619	0/0:26,0:26:71.99:0,72,1866	1/1:0,44:44:99:2093,111,0	1/1:1,26:27:66.23:1250,66,0	1/1:1,21:22:57.20:1079,57,0	1/1:5,30:35:81.22:1404,81,0	1/1:1,19:20:45.15:854,45,0	1/1:2,17:19:48.16:900,48,0	1/1:2,22:23:57.20:1081,57,0	1/1:1,20:21:54.19:1023,54,0	1/1:0,22:23:66.23:1250,66,0	1/1:1,18:19:45.15:833,45,0	1/1:1,16:17:39.13:739,39,0	1/1:1,24:25:56.88:1060,57,0	0/0:22,0:22:63.20:0,63,1604	0/0:18,0:18:54.19:0,54,1452	1/1:1,21:22:63.17:1087,63,0	1/1:2,21:23:54.19:1017,54,0	1/1:0,35:35:78.27:1479,78,0	1/1:0,21:21:51.17:967,51,0	1/1:1,14:15:36.12:682,36,0	1/1:0,15:15:33.11:625,33,0	1/1:1,12:13:30.10:568,30,0	1/1:2,26:28:78.25:1446,78,0	1/1:4,20:24:57.19:1060,57,0	1/1:1,15:14:42.14:797,42,0
chr10	28324248	.	C	CT	12307.81	PASS	AB=0.616;AC=46;AF=0.821;AN=56;BaseQRankSum=-9.468;DP=670;FS=5.096;HRun=10;HaplotypeScore=69.2479;InbreedingCoeff=0.7581;MQ=74.84;MQ0=1;MQRankSum=-0.713;QD=21.33;ReadPosRankSum=0.811;VQSLOD=5.9135;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,34:39:59.57:839,60,0	1/1:3,4:7:12.03:128,12,0	0/0:20,0:19:24.07:0,24,170	0/0:14,0:15:21.86:0,22,152	1/1:3,27:31:78.20:831,78,0	1/1:5,20:25:32.50:551,33,0	1/1:6,26:32:47.54:711,48,0	0/1:11,10:21:0.62:183,0,1	1/1:4,25:29:57.14:607,57,0	1/1:4,17:21:48.12:512,48,0	1/1:4,8:12:2.43:231,2,0	1/1:4,15:19:27.07:287,27,0	1/1:5,17:22:20.47:423,20,0	1/1:2,23:25:37.59:556,38,0	1/1:2,23:25:63.08:657,63,0	1/1:8,17:25:51.09:532,51,0	0/0:33,0:33:83.87:0,84,690	0/0:21,0:24:45.94:0,46,349	1/1:6,18:24:54.10:553,54,0	1/1:7,19:26:26.67:487,27,0	1/1:5,24:30:60.11:628,60,0	0/1:5,19:25:13.95:465,0,14	1/1:2,17:19:45.11:474,45,0	1/1:3,20:23:51.13:544,51,0	1/1:2,13:16:41.68:410,42,0	1/1:5,17:22:14.20:431,14,0	1/1:8,30:38:78.16:820,78,0	1/1:6,14:20:42.11:447,42,0
chr10	28324658	.	A	AAAT	16987.72	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-7.152;DP=462;FS=0.701;HRun=0;HaplotypeScore=52.4136;InbreedingCoeff=0.9495;MQ=68.34;MQ0=0;MQRankSum=-2.759;QD=40.74;ReadPosRankSum=0.162;VQSLOD=5.5294;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,22:30:66.23:1341,66,0	1/1:3,3:6:9.03:184,9,0	0/0:7,0:7:12.04:0,12,152	0/0:12,0:12:15.05:0,15,212	1/1:7,20:29:57.13:1094,57,0	1/1:9,19:28:19.82:1176,20,0	1/1:7,11:19:33.11:674,33,0	1/1:15,23:41:81.25:1496,81,0	1/1:2,6:8:21.07:422,21,0	1/1:6,19:26:57.18:1078,57,0	1/1:2,15:17:42.14:859,42,0	1/1:6,8:15:30.10:609,30,0	1/1:3,7:11:27.09:538,27,0	1/1:5,10:16:36.12:736,36,0	1/1:6,12:19:33.11:675,33,0	1/1:8,14:22:42.14:852,42,0	0/0:13,0:13:36.12:0,36,521	0/0:13,0:13:27.09:0,27,388	1/1:5,11:15:36.12:710,36,0	1/1:7,13:20:42.14:829,42,0	1/1:3,8:11:24.08:491,24,0	1/1:3,6:9:15.05:282,15,0	1/1:3,5:8:15.05:282,15,0	1/1:3,5:8:15.05:307,15,0	1/1:2,11:15:27.09:552,27,0	1/1:6,11:17:36.12:737,36,0	1/1:7,12:19:39.13:756,39,0	1/1:1,5:6:15.05:307,15,0
chr10	28325863	.	T	TA	11027.56	PASS	AB=0.630;AC=47;AF=0.839;AN=56;BaseQRankSum=-8.767;DP=627;FS=4.427;HRun=11;HaplotypeScore=61.7068;InbreedingCoeff=0.7022;MQ=74.90;MQ0=0;MQRankSum=0.133;QD=19.28;ReadPosRankSum=0.190;VQSLOD=5.9258;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,25:33:5.28:584,5,0	1/1:4,7:11:0.80:186,1,0	0/0:17,0:16:15.56:0,16,111	0/0:10,0:10:2.77:0,3,13	1/1:8,27:36:37.45:705,37,0	1/1:2,21:24:47.26:511,47,0	1/1:8,18:26:18.89:373,19,0	1/1:6,20:26:59.45:569,59,0	1/1:2,17:19:47.58:464,48,0	1/1:6,20:26:18.63:473,19,0	1/1:8,23:32:63.05:618,63,0	1/1:2,11:13:3.82:220,4,0	1/1:5,18:23:28.33:465,28,0	1/1:4,19:23:42.08:426,42,0	1/1:5,17:22:30.01:384,30,0	1/1:3,16:19:38.67:396,39,0	0/0:16,0:16:41.75:0,42,319	0/0:11,0:11:26.88:0,27,209	1/1:2,18:21:53.91:515,54,0	1/1:6,23:30:68.97:684,69,0	1/1:3,7:10:15.03:152,15,0	0/1:7,9:17:13.58:225,0,14	1/1:3,27:30:63.09:630,63,0	1/1:1,8:9:24.05:244,24,0	1/1:7,26:33:36.88:555,37,0	1/1:11,17:28:50.94:501,51,0	1/1:13,34:47:29.75:844,30,0	1/1:1,12:13:30.06:304,30,0
chr10	28327233	.	CTGTGTGTGTG	C	7052.30	PASS	AB=0.848;AC=40;AF=0.833;AN=48;BaseQRankSum=0.369;DP=602;FS=1.022;HRun=0;HaplotypeScore=222.0163;InbreedingCoeff=0.3495;MQ=62.54;MQ0=13;MQRankSum=-3.518;QD=16.52;ReadPosRankSum=1.854;VQSLOD=3.2922;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:29,3:31:28.56:247,0,29	1/1:2,3:5:5.98:108,6,0	./.	./.	1/1:17,8:25:8.99:197,9,0	1/1:9,7:18:18.03:412,18,0	0/1:18,0:24:17.27:17,0,102	1/1:30,0:30:2.65:20,3,0	1/1:7,10:17:24.08:697,24,0	1/1:19,0:19:2.59:10,3,0	1/1:10,7:18:5.67:108,6,0	1/1:10,9:20:4.75:605,5,0	1/1:12,6:19:27.09:597,27,0	1/1:10,5:16:15.01:354,15,0	1/1:11,9:21:27.09:714,27,0	1/1:11,3:16:18.06:493,18,0	0/0:22,0:27:12.93:0,13,249	0/0:12,0:13:15.03:0,15,186	./.	1/1:20,9:29:27.06:695,27,0	./.	1/1:18,8:26:12.04:353,12,0	1/1:11,2:13:6.02:144,6,0	0/0:17,2:18:0:0,0,0	1/1:13,4:17:5.96:177,6,0	1/1:18,1:18:0.83:85,1,0	1/1:21,7:30:33.11:862,33,0	1/1:10,1:12:6.02:158,6,0
chr10	28327705	.	T	TC	1334.99	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-10.001;DP=802;FS=0.558;HRun=2;HaplotypeScore=145.0848;InbreedingCoeff=0.9975;MQ=80.67;MQ0=0;MQRankSum=-1.788;QD=27.81;ReadPosRankSum=-2.210;VQSLOD=2.8310;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,106,597	0/0:15,0:15:30.75:0,31,196	0/0:18,0:18:51.06:0,51,587	0/0:23,0:23:53.08:0,53,583	0/0:44,0:44:99:0,110,662	0/0:17,0:17:22.42:0,22,218	0/0:22,0:22:55.14:0,55,312	0/0:31,0:31:52.39:0,52,264	0/0:28,0:28:64.98:0,65,357	0/0:31,0:31:65.09:0,65,393	0/0:20,0:20:28.44:0,28,286	0/0:23,0:23:64.88:0,65,348	0/0:41,0:41:99:0,110,628	0/0:31,0:31:61.41:0,61,472	0/0:41,0:41:70.30:0,70,487	0/0:35,0:35:62.62:0,63,440	1/1:2,32:34:81.05:1021,81,0	1/1:0,14:14:36.07:436,36,0	0/0:24,0:24:57.63:0,58,297	0/0:34,0:34:84.48:0,84,526	0/0:70,0:70:99:0,176,957	0/0:19,0:19:52.17:0,52,292	0/0:22,0:22:49.29:0,49,290	0/0:29,0:29:72.41:0,72,401	0/0:23,0:23:63.92:0,64,377	0/0:29,0:29:77.61:0,78,424	0/0:23,0:23:67.26:0,67,398	0/0:12,0:12:30.33:0,30,183
chr10	28328083	.	CTGTGTGTATGTGTG	C	3820.47	PASS	AB=0.538;AC=39;AF=0.848;AN=46;BaseQRankSum=-0.540;DP=494;FS=3.031;HRun=0;HaplotypeScore=128.5816;InbreedingCoeff=0.3895;MQ=40.44;MQ0=56;MQRankSum=-0.641;QD=9.46;ReadPosRankSum=1.270;VQSLOD=2.3898;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:4,19:20:0:0,0,0	1/1:3,5:6:3.01:121,3,0	./.	./.	1/1:6,0:24:2.50:9,2,0	1/1:3,0:18:3.01:87,3,0	1/1:10,9:12:5.02:19,5,0	1/1:23,0:22:34.82:320,35,0	1/1:4,16:19:9.03:253,9,0	1/1:5,24:27:38.59:542,39,0	1/1:6,0:6:2.22:7,2,0	1/1:5,20:22:4.72:126,5,0	1/1:18,0:17:27.31:355,27,0	1/1:4,8:11:2.37:8,2,0	./.	1/1:4,2:15:5.05:126,5,0	0/0:19,0:18:6.93:0,7,129	0/0:8,0:6:3.01:0,3,57	1/1:4,0:8:22.71:343,23,0	1/1:3,25:27:3.01:119,3,0	1/1:21,1:16:2.99:37,3,0	0/1:3,12:13:0.01:0,0,0	0/1:1,1:22:0:0,0,0	./.	./.	1/1:4,14:18:40.59:732,41,0	1/1:4,15:16:5.98:129,6,0	1/1:13,7:8:12.04:487,12,0
chr10	28328087	.	GTGTA	G	1889.44	PASS	AC=36;AF=0.947;AN=38;BaseQRankSum=1.691;DP=468;FS=0.000;HRun=0;HaplotypeScore=105.1766;InbreedingCoeff=0.1052;MQ=40.32;MQ0=53;MQRankSum=1.121;QD=5.85;ReadPosRankSum=-0.102;VQSLOD=2.1008;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	1/1:8,0:6:3.01:34,3,0	./.	./.	1/1:25,0:23:2.50:9,2,0	1/1:17,0:16:3.01:35,3,0	./.	1/1:21,0:20:35.39:330,35,0	1/1:20,0:18:5.48:43,5,0	1/1:27,0:25:29.58:223,30,0	1/1:7,0:6:2.22:7,2,0	1/1:23,0:20:2.90:34,3,0	1/1:20,0:17:27.29:194,27,0	./.	./.	1/1:14,0:13:5.05:40,5,0	1/1:18,0:17:24.23:259,24,0	1/1:4,4:6:3.01:42,3,0	1/1:8,0:8:20.89:175,21,0	1/1:29,0:27:3.01:34,3,0	1/1:23,0:16:2.92:17,3,0	0/0:14,0:12:0:0,0,0	./.	./.	./.	1/1:18,0:18:37.56:294,38,0	1/1:19,0:16:5.98:52,6,0	1/1:18,0:7:12.03:138,12,0
chr10	28331165	.	TAGCCCCAGCCCC	T	1331.49	PASS	AC=18;AF=1.000;AN=18;DP=161;FS=0.000;HRun=0;HaplotypeScore=72.2096;MQ=90.06;MQ0=0;QD=25.12;VQSLOD=1.3482;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	./.	./.	1/1:8,0:8:3.01:73,3,0	./.	1/1:6,1:7:3.01:102,3,0	./.	./.	1/1:5,3:8:6.02:205,6,0	./.	1/1:6,3:9:9.03:307,9,0	./.	1/1:0,2:2:6.02:204,6,0	./.	./.	./.	1/1:5,1:6:3.01:102,3,0	./.	./.	1/1:5,1:6:3.01:102,3,0	./.	./.	./.	1/1:3,2:5:6.02:205,6,0	1/1:1,1:2:3.01:102,3,0
chr10	28331890	.	TCTCTCTCACACA	T	2357.04	PASS	AB=0.967;AC=18;AF=0.321;AN=56;BaseQRankSum=12.638;DP=729;FS=55.891;HRun=0;HaplotypeScore=253.6404;InbreedingCoeff=-0.2033;MQ=45.83;MQ0=19;MQRankSum=-10.567;QD=5.71;ReadPosRankSum=0.318;VQSLOD=0.4553;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:39,0:38:9.82:10,0,948	0/1:10,0:10:79.78:80,0,180	0/0:23,0:3:6.02:0,6,108	0/0:26,0:7:14.74:0,15,281	0/0:29,0:28:21.53:0,22,442	0/1:25,0:24:99:191,0,634	0/0:38,0:37:61.93:0,62,1285	0/0:26,0:24:41.98:0,42,628	0/1:22,0:22:99:143,0,417	0/1:32,0:30:99:210,0,1161	0/0:12,0:12:9:0,9,198	0/1:32,0:32:99:107,0,681	0/1:20,0:20:99:367,0,272	0/1:28,0:28:69.12:69,0,609	0/1:35,0:35:76.43:76,0,681	1/1:26,0:26:19.28:273,19,0	0/1:5,28:33:70.32:208,0,70	1/1:3,18:20:2.97:115,3,0	0/1:15,0:14:99:173,0,309	0/0:26,0:26:39.08:0,39,642	0/0:32,0:31:43.38:0,43,723	0/0:21,0:21:18.50:0,18,266	0/0:14,0:14:12.04:0,12,288	0/0:38,0:37:19.22:0,19,353	0/0:31,0:28:19.43:0,19,329	0/1:33,0:32:99:313,0,903	0/1:32,0:31:99:103,0,688	0/1:10,0:8:84.21:84,0,126
chr10	28331894	.	TCTCACACACACACACA	T	7134.26	PASS	AB=0.954;AC=24;AF=0.429;AN=56;BaseQRankSum=9.679;DP=717;FS=43.183;HRun=0;HaplotypeScore=258.3763;InbreedingCoeff=-0.5711;MQ=45.18;MQ0=20;MQRankSum=-6.022;QD=11.56;ReadPosRankSum=1.827;VQSLOD=2.4776;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:36,2:37:93.33:93,0,270	0/1:4,5:9:60.58:283,0,61	0/0:21,0:2:5.91:0,6,40	0/0:25,0:6:9.80:0,10,68	0/1:29,0:28:6.58:7,0,126	0/1:23,1:24:99:655,0,126	0/1:36,2:37:20.93:21,0,347	0/0:26,0:23:29.78:0,30,224	0/1:22,1:24:99:422,0,138	0/1:31,0:29:99:815,0,319	0/0:13,0:13:5.96:0,6,48	0/1:30,0:30:99:379,0,207	0/1:18,2:21:74.67:927,0,75	0/1:26,1:27:99:255,0,161	0/1:39,0:39:99:318,0,216	1/1:25,0:25:27.66:457,28,0	0/1:31,0:31:0.33:0,0,18	0/1:20,0:19:0.48:0,0,62	0/1:14,0:13:74.29:490,0,74	0/1:22,1:24:75.66:76,0,108	0/1:28,0:27:31.89:32,0,152	0/1:22,1:23:52.05:52,0,56	0/0:15,0:15:11.84:0,12,108	0/1:37,0:36:28.57:29,0,80	0/1:28,0:26:22.06:22,0,63	0/1:33,0:32:99:1061,0,350	0/1:32,0:30:99:430,0,197	0/1:9,1:8:24.90:309,0,25
chr10	28331896	.	TCACACACACACACA	T	8114.44	PASS	AB=0.781;AC=37;AF=0.771;AN=48;BaseQRankSum=3.299;DP=706;FS=4.009;HRun=0;HaplotypeScore=240.7852;InbreedingCoeff=0.2985;MQ=45.13;MQ0=19;MQRankSum=0.625;QD=14.46;ReadPosRankSum=1.886;VQSLOD=3.6713;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:25,13:37:3.01:117,3,0	0/1:8,1:9:12.02:298,0,12	./.	./.	./.	1/1:18,6:23:32.81:789,33,0	0/1:28,9:36:0.28:10,0,0	0/0:27,0:24:3.01:0,3,90	1/1:12,10:24:12.04:424,12,0	1/1:23,8:29:27.02:951,27,0	./.	1/1:16,12:29:12.04:458,12,0	1/1:10,10:21:27.09:1008,27,0	1/1:14,11:26:9.92:354,10,0	1/1:16,22:39:11.71:406,12,0	1/1:12,13:25:11.98:447,12,0	1/1:31,0:31:4.49:20,4,0	0/1:22,0:21:1.02:1,0,359	1/1:8,6:14:21.03:613,21,0	1/1:12,13:25:14.93:145,15,0	1/1:23,0:24:5.60:52,6,0	0/1:8,10:22:0:0,0,0	0/1:9,6:15:0:0,0,0	0/0:27,8:36:0.58:0,1,1	0/1:17,11:25:0:0,0,0	0/1:20,11:32:91.37:1196,0,91	1/1:25,6:30:10.83:461,11,0	1/1:8,2:8:15:363,15,0
chr10	28333139	.	TAA	T	14730	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-10.113;DP=607;FS=9.902;HRun=10;HaplotypeScore=81.3584;InbreedingCoeff=0.9862;MQ=73.75;MQ0=3;MQRankSum=-2.194;QD=27.23;ReadPosRankSum=1.211;VQSLOD=4.1294;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,29:31:68.84:768,69,0	1/1:2,9:11:27.07:301,27,0	0/0:19,0:17:26.69:0,27,349	0/0:8,0:7:10.28:0,10,145	1/1:5,21:26:57.12:635,57,0	1/1:6,21:27:60.15:669,60,0	1/1:2,19:21:60.16:667,60,0	1/1:7,31:38:93.18:1006,93,0	1/1:0,13:13:33.09:368,33,0	1/1:3,21:24:57.14:635,57,0	1/1:1,19:20:48.11:535,48,0	1/1:0,10:10:27.07:301,27,0	1/1:1,16:18:36.03:460,36,0	1/1:3,26:28:72.18:803,72,0	1/1:6,24:29:66.16:736,66,0	1/1:1,22:23:57.15:636,57,0	0/0:1,0:23:52.28:0,52,180	0/0:0,0:16:32.44:0,32,111	1/1:4,19:23:57.13:627,57,0	1/1:1,24:25:69.15:757,69,0	1/1:1,19:20:45.11:502,45,0	1/1:2,15:17:39.10:435,39,0	1/1:1,19:19:48.12:535,48,0	1/1:1,22:23:60.16:669,60,0	1/1:2,14:16:39.09:435,39,0	1/1:2,35:37:99:1170,105,0	1/1:2,24:26:60.15:669,60,0	1/1:0,12:13:38.84:413,39,0
chr10	28333498	.	A	AT	25354.64	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-8.092;DP=727;FS=5.050;HRun=1;HaplotypeScore=86.0618;InbreedingCoeff=0.9949;MQ=75.10;MQ0=0;MQRankSum=-3.348;QD=40.37;ReadPosRankSum=1.890;VQSLOD=5.4633;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,42:44:99:1619,108,0	1/1:1,18:19:47.76:719,48,0	0/0:16,0:17:44.59:0,45,538	0/0:10,0:10:23.98:0,24,258	1/1:2,14:16:42.14:629,42,0	1/1:0,20:20:57.19:854,57,0	1/1:3,44:47:99:1708,114,0	1/1:1,25:26:75.24:1104,75,0	1/1:1,22:23:63.21:944,63,0	1/1:1,32:33:96.32:1431,96,0	1/1:1,13:14:33.11:495,33,0	1/1:1,34:35:99:1483,99,0	1/1:3,27:30:75.24:1105,75,0	1/1:1,25:26:75.25:1124,75,0	1/1:1,23:25:66.22:989,66,0	1/1:1,23:24:57.19:855,57,0	0/0:37,0:37:99:0,102,1305	0/0:35,0:35:99:0,105,1363	1/1:2,14:16:45.12:649,45,0	1/1:0,20:20:54.18:809,54,0	1/1:2,63:66:99:2697,181,0	1/1:1,12:13:36.12:539,36,0	1/1:1,16:17:45.15:674,45,0	1/1:1,38:39:99:1664,111,0	1/1:2,16:18:48.16:719,48,0	1/1:0,29:29:87.28:1284,87,0	1/1:0,23:23:69.23:1034,69,0	1/1:0,5:5:15.05:225,15,0
chr10	28333646	.	AAAGTGCCC	A	1293.54	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.407;DP=731;FS=3.342;HRun=0;HaplotypeScore=181.6299;InbreedingCoeff=0.9440;MQ=77.00;MQ0=0;MQRankSum=-6.727;QD=41.73;ReadPosRankSum=1.269;VQSLOD=3.5964;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:63,0:64:99:0,175,7075	0/0:10,0:10:30.08:0,30,1202	0/0:19,0:19:48.16:0,48,1767	0/0:18,0:18:51.14:0,51,1865	0/0:21,0:21:60.21:0,60,2387	0/0:25,0:25:72.25:0,72,3135	0/0:34,0:34:93.32:0,93,3864	0/0:35,0:35:87.30:0,87,3664	0/0:26,0:26:75.26:0,75,3096	0/0:27,0:27:81.28:0,81,3449	0/0:14,0:14:42.14:0,42,1796	0/0:35,0:35:99:0,102,4322	0/0:27,0:27:75.26:0,75,3128	0/0:31,0:31:93.32:0,93,4013	0/0:28,0:27:84.29:0,84,3544	0/0:28,0:28:81.28:0,81,3455	1/1:4,13:17:33.11:914,33,0	1/1:3,11:14:18.06:499,18,0	0/0:17,0:16:48.16:0,48,2028	0/0:33,0:33:93.32:0,93,3817	0/0:42,0:42:99:0,117,4673	0/0:28,0:28:78.27:0,78,3206	0/0:30,0:30:87.30:0,87,3742	0/0:23,0:23:63.22:0,63,2754	0/0:28,0:28:78.27:0,78,3139	0/0:30,0:30:84.29:0,84,3648	0/0:25,0:25:63.22:0,63,2663	0/0:2,0:2:6.02:0,6,257
chr10	28333912	.	AG	A	19020.20	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=9.748;DP=684;FS=3.843;HRun=3;HaplotypeScore=148.2651;InbreedingCoeff=0.9991;MQ=93.34;MQ0=0;MQRankSum=-10.813;QD=34.33;ReadPosRankSum=4.460;VQSLOD=3.8410;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,30:32:93.18:1114,93,0	1/1:1,10:11:27.08:334,27,0	0/0:36,1:37:99:0,105,1412	0/0:36,0:36:78.31:0,78,1151	1/1:1,24:25:69.09:817,69,0	1/1:2,20:22:66.19:803,66,0	1/1:2,16:18:51.15:620,51,0	1/1:0,30:30:90.28:1116,90,0	1/1:3,21:24:66.16:799,66,0	1/1:2,20:22:60.18:734,60,0	1/1:0,13:13:39.12:484,39,0	1/1:1,20:21:57.18:706,57,0	1/1:4,30:34:99:1211,99,0	1/1:1,21:22:63.20:780,63,0	1/1:4,24:28:78.22:940,78,0	1/1:3,23:26:75.23:916,75,0	0/0:39,0:39:99:0,117,1665	0/0:18,0:18:42.14:0,42,599	1/1:1,19:20:57.18:706,57,0	1/1:7,27:34:96.27:1152,96,0	1/1:1,14:15:36.05:427,36,0	1/1:2,28:30:87.22:1058,87,0	1/1:1,21:22:54.05:631,54,0	1/1:2,21:23:60.12:700,60,0	1/1:3,28:31:93.26:1125,93,0	1/1:4,20:24:69.21:845,69,0	1/1:0,19:19:57.18:705,57,0	1/1:0,8:8:24.08:297,24,0
chr10	28333951	.	TG	T	14096.74	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=12.051;DP=528;FS=0.416;HRun=1;HaplotypeScore=164.2851;InbreedingCoeff=0.9934;MQ=85.34;MQ0=0;MQRankSum=-12.069;QD=32.78;ReadPosRankSum=3.486;VQSLOD=4.5247;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,33:37:77.13:950,77,0	1/1:1,13:14:36.58:444,37,0	0/0:22,0:22:66.22:0,66,997	0/0:25,0:26:61.29:0,61,936	1/1:1,17:18:46.03:559,46,0	1/1:0,14:14:39.08:466,39,0	1/1:1,15:16:43.02:525,43,0	1/1:1,24:25:72.06:889,72,0	1/1:1,18:19:53.86:655,54,0	1/1:0,10:10:25.27:305,25,0	1/1:1,7:8:18.06:218,18,0	1/1:2,20:22:63.20:770,63,0	1/1:1,22:23:69.22:851,69,0	1/1:1,14:15:43.02:520,43,0	1/1:2,20:22:53.07:653,53,0	1/1:0,14:14:42.13:516,42,0	0/0:34,0:34:99:0,102,1631	0/0:16,0:16:45.15:0,45,719	1/1:1,11:12:36.11:446,36,0	1/1:1,26:27:76.12:931,76,0	1/1:2,9:11:17.19:222,17,0	1/1:4,11:15:38.61:461,39,0	1/1:1,15:16:43.02:525,43,0	1/1:0,18:18:48.10:580,48,0	1/1:0,24:24:72.23:900,72,0	1/1:1,19:20:57.14:687,57,0	1/1:0,22:22:63.20:787,63,0	1/1:2,6:8:21.40:236,21,0
chr10	28334791	.	TC	T	12594.57	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=2.951;DP=405;FS=5.933;HRun=2;HaplotypeScore=108.0522;InbreedingCoeff=0.8768;MQ=70.53;MQ0=0;MQRankSum=-7.520;QD=33.23;ReadPosRankSum=2.938;VQSLOD=4.5789;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,14:15:39.07:485,39,0	1/1:1,3:4:11.99:135,12,0	0/0:13,0:12:35.96:0,36,433	0/0:13,0:13:24.06:0,24,316	1/1:3,19:22:54.01:637,54,0	1/1:1,17:18:51.10:639,51,0	1/1:1,6:7:18.06:232,18,0	1/1:6,16:22:63.09:757,63,0	1/1:0,15:15:42.14:542,42,0	1/1:2,16:18:51.12:634,51,0	1/1:1,13:14:42.09:523,42,0	1/1:0,11:11:30.10:387,30,0	1/1:1,6:7:18.06:232,18,0	1/1:1,14:15:45.05:543,45,0	1/1:2,12:14:39.08:485,39,0	1/1:1,15:16:47.84:574,48,0	1/1:1,16:16:42.08:522,42,0	1/1:1,7:8:24.04:291,24,0	1/1:5,13:18:54.01:610,54,0	1/1:2,24:26:75.10:910,75,0	1/1:1,3:4:5.98:59,6,0	1/1:1,17:18:42.09:524,42,0	1/1:2,22:24:66.13:816,66,0	1/1:1,7:8:20.98:250,21,0	1/1:2,15:17:36.12:465,36,0	1/1:1,16:17:42.14:543,42,0	1/1:1,21:22:60.10:722,60,0	1/1:0,2:2:6.02:78,6,0
chr10	28334827	.	AGCCCTC	A	18988.53	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=4.283;DP=345;FS=11.490;HRun=0;HaplotypeScore=103.0068;InbreedingCoeff=0.7979;MQ=77.92;MQ0=0;MQRankSum=-8.544;QD=59.71;ReadPosRankSum=4.876;VQSLOD=4.3907;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,15:16:45.15:1118,45,0	1/1:0,1:1:3.01:77,3,0	0/0:19,0:19:57.17:0,57,1988	0/0:8,0:8:24.04:0,24,669	1/1:0,22:22:42.14:1069,42,0	1/1:1,16:17:42.14:1048,42,0	1/1:0,7:7:21.07:534,21,0	1/1:1,25:26:78.25:1871,78,0	1/1:0,10:10:24.08:614,24,0	1/1:0,17:17:39.13:999,39,0	1/1:0,10:10:18.06:397,18,0	1/1:0,11:11:33.11:842,33,0	1/1:0,7:7:15.05:382,15,0	1/1:0,11:11:30.10:765,30,0	1/1:0,9:9:27.09:689,27,0	1/1:3,8:11:30.10:709,30,0	1/1:1,7:8:24.08:610,24,0	1/1:0,7:7:18.06:461,18,0	1/1:0,13:13:33.11:809,33,0	1/1:0,21:21:60.16:1429,60,0	1/1:1,6:7:12.04:268,12,0	1/1:1,12:13:30.09:712,30,0	1/1:0,22:22:48.16:1226,48,0	1/1:0,9:9:15.05:375,15,0	1/1:1,13:14:33.11:832,33,0	1/1:0,6:6:12.04:307,12,0	1/1:0,18:18:30.10:767,30,0	1/1:0,5:5:3.01:76,3,0
chr10	28334988	.	A	AC	16641	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=6.404;DP=477;FS=2.536;HRun=0;HaplotypeScore=141.6841;InbreedingCoeff=0.9215;MQ=72.38;MQ0=0;MQRankSum=-8.954;QD=37.40;ReadPosRankSum=5.351;VQSLOD=4.1105;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,18:19:45.08:673,45,0	1/1:0,7:7:21.07:333,21,0	0/0:23,0:22:60.13:0,60,733	0/0:9,0:9:25.99:0,26,293	1/1:3,29:32:78.18:1196,78,0	1/1:1,14:15:33.11:519,33,0	1/1:1,7:8:12.04:179,12,0	1/1:4,32:36:99:1579,105,0	1/1:0,12:12:32.98:463,33,0	1/1:2,25:27:72.13:1113,72,0	1/1:0,14:14:39.05:583,39,0	1/1:0,14:14:39.13:605,39,0	1/1:2,18:20:45.08:679,45,0	1/1:1,21:22:51.17:783,51,0	1/1:3,17:20:33.11:509,33,0	1/1:1,12:13:36.05:538,36,0	1/1:0,11:11:33.04:493,33,0	1/1:0,2:2:6.02:95,6,0	1/1:1,10:11:27.09:414,27,0	1/1:2,23:25:57.13:853,57,0	1/1:0,12:12:32.98:464,33,0	1/1:2,19:21:50.93:714,51,0	1/1:0,16:16:41.97:653,42,0	1/1:1,5:6:15.05:215,15,0	1/1:5,20:25:51.04:746,51,0	1/1:1,21:22:63.21:997,63,0	1/1:0,24:24:60.12:914,60,0	1/1:0,11:11:21.07:332,21,0
chr10	28336388	.	GTGCCATCCCATACATTGCCA	G	51963.69	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=10.163;DP=531;FS=4.162;HRun=0;HaplotypeScore=279.7797;InbreedingCoeff=0.9178;MQ=90.11;MQ0=0;MQRankSum=-11.864;QD=109.40;ReadPosRankSum=9.179;VQSLOD=3.4090;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,15:15:15.05:858,15,0	1/1:0,6:6:15.05:857,15,0	0/0:23,0:23:68.04:0,68,3498	0/0:33,0:33:96.30:0,96,5803	1/1:0,29:29:69.19:3666,69,0	1/1:0,29:29:63.22:3600,63,0	1/1:0,27:27:42.14:2397,42,0	1/1:0,23:23:66.14:1933,66,0	1/1:0,26:26:57.20:3257,57,0	1/1:0,16:16:45.13:2420,45,0	1/1:0,17:17:36.12:2049,36,0	1/1:0,29:29:57.20:3259,57,0	1/1:0,21:21:39.13:2230,39,0	1/1:1,22:23:39.13:2230,39,0	1/1:0,11:11:15.05:858,15,0	1/1:0,19:19:21.07:1201,21,0	1/1:0,9:9:18.06:967,18,0	1/1:0,8:8:12.04:619,12,0	1/1:0,13:13:36.03:1252,36,0	1/1:0,27:27:60.21:3423,60,0	1/1:0,10:10:15.05:803,15,0	1/1:0,11:11:21.07:1146,21,0	1/1:0,17:17:42.14:2401,42,0	1/1:0,13:13:9.50:513,10,0	1/1:0,23:23:48.16:2737,48,0	1/1:0,15:15:42.07:1971,42,0	1/1:0,29:29:75.26:4288,75,0	1/1:0,9:9:18.06:1029,18,0
chr10	28337688	.	GTA	G	5148.74	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-2.118;DP=599;FS=21.146;HRun=0;HaplotypeScore=123.0680;InbreedingCoeff=0.7077;MQ=47.89;MQ0=13;MQRankSum=1.302;QD=9.41;ReadPosRankSum=-1.147;VQSLOD=3.0277;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:47,1:47:15.21:191,15,0	1/1:9,0:8:11.45:89,11,0	0/0:19,0:8:23.29:0,23,169	0/0:33,0:16:17.28:0,17,210	1/1:13,1:14:17.82:144,18,0	1/1:15,1:16:17.93:138,18,0	1/1:32,1:32:38.59:300,39,0	1/1:18,0:17:38.06:271,38,0	1/1:15,0:14:17.40:135,17,0	1/1:25,1:25:21.76:365,22,0	1/1:12,2:14:20.31:148,20,0	1/1:19,2:21:19.60:245,20,0	1/1:18,0:18:21.67:153,22,0	1/1:22,1:23:28.63:223,29,0	1/1:27,0:26:23.84:195,24,0	1/1:17,1:18:10.75:156,11,0	1/1:19,0:17:3.04:124,3,0	1/1:24,0:23:4.16:232,4,0	1/1:13,0:12:24.87:193,25,0	1/1:15,0:14:11.97:96,12,0	1/1:31,1:31:35.55:281,36,0	1/1:12,3:14:8.99:75,9,0	1/1:14,1:15:23.96:197,24,0	1/1:36,2:38:19.71:210,20,0	1/1:24,2:25:28.74:231,29,0	1/1:26,0:24:46.43:364,46,0	1/1:21,0:21:44.98:357,45,0	1/1:3,0:3:3.01:37,3,0
chr10	28337708	.	GTA	G	3582.12	PASS	AB=0.985;AC=49;AF=0.875;AN=56;BaseQRankSum=1.198;DP=587;FS=11.766;HRun=0;HaplotypeScore=133.6174;InbreedingCoeff=0.0872;MQ=43.66;MQ0=13;MQRankSum=4.327;QD=6.51;ReadPosRankSum=-3.541;VQSLOD=2.0756;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:47,0:46:0.66:69,1,0	1/1:9,0:8:4.90:41,5,0	0/1:15,0:4:6.83:7,0,139	0/0:36,0:8:17.33:0,17,301	1/1:11,1:12:2.85:22,3,0	1/1:18,1:19:23.91:185,24,0	1/1:31,0:30:29.30:232,29,0	0/1:20,0:19:57.21:57,0,70	1/1:16,0:15:22.42:169,22,0	0/1:20,0:18:41.65:165,0,42	1/1:13,0:13:17.92:137,18,0	1/1:21,0:21:19.34:232,19,0	1/1:19,0:19:7.14:139,7,0	1/1:23,0:21:23.77:178,24,0	1/1:26,0:25:14.42:119,14,0	1/1:22,1:23:25.20:279,25,0	0/1:18,0:16:15.57:53,0,16	1/1:25,1:24:10.77:277,11,0	0/1:11,1:12:65.23:65,0,123	1/1:14,0:14:8.97:72,9,0	1/1:32,0:31:8.94:167,9,0	1/1:16,0:15:17.97:146,18,0	1/1:12,0:12:11.97:97,12,0	1/1:34,1:34:4.66:72,5,0	1/1:23,0:22:7.76:54,8,0	1/1:21,0:19:21.60:227,22,0	1/1:21,0:20:36.25:284,36,0	1/1:6,0:6:3.01:37,3,0
chr10	28337710	.	ATGTGTCTG	A	5747.01	PASS	AB=0.997;AC=34;AF=0.607;AN=56;BaseQRankSum=-8.726;DP=588;FS=9.080;HRun=0;HaplotypeScore=159.0628;InbreedingCoeff=-0.3481;MQ=44.96;MQ0=13;MQRankSum=2.304;QD=10.28;ReadPosRankSum=-8.910;VQSLOD=0.0594;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:47,0:46:4.05:4,0,128	0/1:9,0:8:13.95:14,0,50	1/1:16,0:4:1.82:5,2,0	0/1:36,0:9:0.45:0,0,28	1/1:6,5:11:0.07:0,0,0	0/1:19,0:19:1.28:331,0,1	1/1:32,0:31:29.11:635,29,0	1/1:10,10:19:30.02:419,30,0	0/1:16,0:15:42.32:448,0,42	0/1:20,0:18:99:276,0,164	0/1:13,0:13:12.19:111,0,12	0/1:21,0:21:52.31:322,0,52	0/1:18,0:18:88.94:295,0,89	0/1:23,0:21:78.18:241,0,78	1/1:26,0:25:1.29:4,1,0	0/1:24,0:24:99:348,0,175	0/1:18,0:16:31.39:31,0,66	0/1:25,0:23:99:429,0,142	0/1:11,0:11:22.81:170,0,23	1/1:14,0:14:3.45:184,3,0	0/1:31,0:30:9.23:227,0,9	1/1:15,0:14:15.05:279,15,0	1/1:12,0:12:12.01:235,12,0	0/1:37,0:36:54.90:55,0,171	0/0:23,0:22:5.83:0,6,82	0/1:21,0:19:88.22:353,0,88	0/1:21,0:20:62.97:330,0,63	0/0:6,0:6:2.96:0,3,19
chr10	28337718	.	G	GTA	3949.31	PASS	AB=0.926;AC=31;AF=0.554;AN=56;BaseQRankSum=-5.486;DP=629;FS=73.727;HRun=0;HaplotypeScore=133.0081;InbreedingCoeff=-0.2009;MQ=47.87;MQ0=19;MQRankSum=4.106;QD=8.13;ReadPosRankSum=3.903;VQSLOD=0.6427;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:24,27:50:39.18:39,0,121	0/1:9,0:8:5.66:6,0,18	0/0:27,0:6:12.90:0,13,155	0/0:58,0:13:23.90:0,24,312	0/0:11,0:11:2.84:0,3,21	1/1:22,0:22:31.80:302,32,0	1/1:36,0:35:15.40:367,15,0	0/1:17,0:16:98.97:178,0,99	1/1:16,0:15:32.55:267,33,0	0/1:9,8:15:86.54:115,0,87	0/1:14,0:14:12.28:112,0,12	0/1:20,0:20:72.89:141,0,73	0/1:21,0:22:39.52:218,0,40	0/1:23,0:21:79.65:122,0,80	0/0:7,0:24:2.82:0,3,19	0/1:23,0:23:45.53:249,0,46	0/0:6,15:20:0.50:0,0,48	0/1:23,0:21:52.20:233,0,52	0/1:13,0:13:99:140,0,105	1/1:14,0:14:11.78:86,12,0	0/1:32,0:31:15.89:189,0,16	0/1:17,0:16:1.05:174,0,1	0/1:15,0:15:17.64:167,0,18	0/1:14,25:39:14.47:264,0,14	1/1:5,15:20:5.69:115,6,0	1/1:19,0:17:7.66:220,8,0	1/1:17,0:16:2.42:217,2,0	1/1:0,0:5:3:28,3,0
chr10	28339524	.	C	CAAAG	32279.06	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=1.348;DP=548;FS=17.436;HRun=0;HaplotypeScore=100.9941;InbreedingCoeff=0.9932;MQ=91.09;MQ0=0;MQRankSum=-10.459;QD=65.34;ReadPosRankSum=5.183;VQSLOD=5.2827;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,14:15:39.13:982,39,0	1/1:0,8:8:24.08:633,24,0	0/0:38,0:38:78.21:0,78,1388	0/0:16,0:16:42.14:0,42,732	1/1:1,16:18:45.15:1162,45,0	1/1:4,23:27:69.23:1696,69,0	1/1:2,5:10:18.06:405,18,0	1/1:5,9:16:42.14:985,42,0	1/1:5,22:28:66.23:1720,66,0	1/1:5,18:24:60.20:1516,60,0	1/1:2,19:23:54.18:1382,54,0	1/1:0,16:16:42.14:1108,42,0	1/1:1,18:20:54.19:1401,54,0	1/1:4,14:18:42.14:1060,42,0	1/1:5,20:28:54.19:1403,54,0	1/1:1,19:20:54.19:1421,54,0	1/1:1,12:14:36.08:889,36,0	1/1:2,9:11:33.11:849,33,0	1/1:3,7:10:24.08:621,24,0	1/1:3,25:29:75.26:1940,75,0	1/1:2,13:16:39.13:1006,39,0	1/1:2,12:14:39.13:987,39,0	1/1:3,24:28:78.27:1986,78,0	1/1:0,12:12:33.11:871,33,0	1/1:3,20:24:63.22:1635,63,0	1/1:0,24:23:72.22:1793,72,0	1/1:7,22:30:78.27:1955,78,0	1/1:0,11:11:33.11:871,33,0
chr10	28340232	.	CT	C	2591.65	PASS	AB=0.814;AC=47;AF=0.904;AN=52;BaseQRankSum=-1.043;DP=212;FS=76.941;HRun=1;HaplotypeScore=33.7979;InbreedingCoeff=-0.1203;MQ=51.79;MQ0=22;MQRankSum=1.492;QD=12.46;ReadPosRankSum=1.152;VQSLOD=-0.1077;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,6:13:18.53:236,19,0	./.	0/1:17,1:3:7.05:7,0,39	0/1:23,1:7:9.14:9,0,101	1/1:1,3:3:6.02:84,6,0	1/1:0,5:4:9.02:109,9,0	1/1:0,6:6:12.04:154,12,0	0/1:17,11:23:99:321,0,218	1/1:3,6:9:6.86:135,7,0	1/1:5,4:6:15.05:194,15,0	1/1:3,1:3:5.97:48,6,0	1/1:1,5:7:6.02:84,6,0	1/1:0,5:6:12.03:146,12,0	1/1:5,2:6:16.74:137,17,0	0/1:1,2:4:34.70:81,0,35	1/1:1,4:5:6.01:84,6,0	1/1:1,5:6:8.93:74,9,0	1/1:2,1:3:2.99:24,3,0	1/1:5,3:4:9.03:125,9,0	1/1:3,3:7:7.60:118,8,0	1/1:0,5:4:3.01:32,3,0	1/1:3,2:2:6.02:83,6,0	1/1:4,7:11:18.01:215,18,0	1/1:0,2:2:3.01:42,3,0	1/1:3,1:4:8.90:97,9,0	./.	0/1:6,1:4:33.08:33,0,41	1/1:0,1:1:3.01:41,3,0
chr10	28340238	.	CCTCCT	C	1536.93	PASS	AB=0.897;AC=39;AF=0.722;AN=54;BaseQRankSum=1.843;DP=188;FS=10.260;HRun=0;HaplotypeScore=43.7957;InbreedingCoeff=0.2362;MQ=52.42;MQ0=16;MQRankSum=-1.580;QD=11.56;ReadPosRankSum=3.710;VQSLOD=0.5931;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,1:11:0.02:107,0,0	1/1:3,0:3:3.01:50,3,0	0/0:19,0:3:4.44:0,4,21	0/0:21,0:7:2.39:0,2,93	0/0:4,0:3:6.46:0,6,50	1/1:2,2:3:5.99:50,6,0	1/1:6,0:6:8.99:125,9,0	0/1:24,1:21:99:130,0,117	1/1:6,2:8:9.75:121,10,0	1/1:7,0:5:8.99:107,9,0	1/1:2,0:2:0.47:1,0,0	0/0:6,1:7:5.99:0,6,49	1/1:3,1:5:11.49:124,11,0	1/1:6,1:6:10.02:122,10,0	0/1:3,0:4:27.87:118,0,28	0/0:3,0:3:5.99:0,6,49	1/1:5,0:5:11.99:134,12,0	1/1:6,0:6:3.01:42,3,0	1/1:5,0:3:3.48:59,3,0	0/1:6,0:6:17.05:23,0,17	0/1:4,1:4:0:0,0,0	1/1:3,0:2:1.36:3,1,0	1/1:6,3:9:10.48:141,10,0	1/1:1,0:1:2.50:9,2,0	1/1:2,0:2:5.95:63,6,0	./.	0/1:7,1:5:40.29:121,0,40	1/1:1,0:1:3.01:33,3,0
chr10	28340240	.	TCCTCC	T	1742.18	PASS	AB=0.885;AC=38;AF=0.760;AN=50;BaseQRankSum=-0.833;DP=173;FS=49.721;HRun=0;HaplotypeScore=41.2009;InbreedingCoeff=0.1340;MQ=53.63;MQ0=13;MQRankSum=-2.201;QD=14.16;ReadPosRankSum=0.305;VQSLOD=0.9638;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:7,3:10:6.53:123,0,7	1/1:3,0:3:3:26,3,0	0/0:18,0:3:6.45:0,6,48	0/0:18,0:7:13.78:0,14,136	0/0:3,0:2:0.47:0,0,1	1/1:3,0:2:5.93:40,6,0	1/1:2,3:5:8.99:144,9,0	1/1:20,2:19:6.05:223,6,0	0/1:8,0:8:10.83:137,0,11	1/1:4,1:3:8.85:99,9,0	1/1:1,1:2:0.47:1,0,0	./.	1/1:3,1:5:11.95:134,12,0	0/1:6,1:6:25.67:105,0,26	0/1:1,1:4:30.63:153,0,31	0/1:3,0:3:0:0,0,0	1/1:5,0:5:8.57:58,9,0	1/1:6,0:6:2.97:20,3,0	1/1:4,1:3:8.94:103,9,0	1/1:5,0:6:7.33:49,7,0	./.	1/1:2,0:1:3:27,3,0	1/1:9,0:9:14.94:183,15,0	1/1:1,0:1:3:27,3,0	1/1:1,0:2:5.91:61,6,0	./.	0/1:8,0:5:25.76:121,0,26	1/1:0,0:1:3.01:43,3,0
chr10	28342383	.	AT	A	5520.89	PASS	AB=1.000;AC=49;AF=0.875;AN=56;BaseQRankSum=7.225;DP=362;FS=43.659;HRun=8;HaplotypeScore=63.4453;InbreedingCoeff=0.7925;MQ=55.64;MQ0=11;MQRankSum=-2.487;QD=18.40;ReadPosRankSum=1.685;VQSLOD=2.3865;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,10:15:21.03:199,21,0	1/1:0,2:2:6.01:56,6,0	0/0:22,1:8:6.90:0,7,52	0/1:15,0:3:0.06:0,0,0	1/1:2,19:19:42.05:399,42,0	1/1:0,6:6:18.03:171,18,0	1/1:2,2:4:9.01:84,9,0	1/1:15,14:23:33.03:312,33,0	1/1:1,5:6:15.02:142,15,0	1/1:4,8:11:24.02:228,24,0	1/1:6,14:20:45.06:426,45,0	1/1:4,2:6:15.02:141,15,0	1/1:4,9:13:27.04:256,27,0	1/1:2,11:13:33.03:307,33,0	1/1:2,5:7:15.02:142,15,0	1/1:3,3:6:18:164,18,0	0/0:26,0:25:60.64:0,61,714	0/0:13,0:12:30.09:0,30,361	1/1:5,12:17:33.02:310,33,0	1/1:2,19:21:51.07:483,51,0	1/1:3,1:3:3:29,3,0	1/1:1,7:8:15.02:142,15,0	1/1:1,16:17:38.92:369,39,0	1/1:0,5:5:15.02:142,15,0	1/1:1,14:15:27.04:255,27,0	1/1:5,14:17:39.02:365,39,0	1/1:4,8:11:24.03:227,24,0	1/1:2,5:6:18.03:171,18,0
chr10	28344897	.	TTGTGTGTG	T	793.83	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=2.474;DP=887;FS=15.484;HRun=0;HaplotypeScore=332.5468;InbreedingCoeff=0.7176;MQ=51.88;MQ0=18;MQRankSum=-4.384;QD=19.85;ReadPosRankSum=1.416;VQSLOD=1.4518;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,101,3039	0/0:11,0:11:30.10:0,30,782	0/0:36,0:18:45.15:0,45,1051	0/0:58,0:26:63.18:0,63,1495	0/0:38,0:38:99:0,107,3352	0/0:17,0:17:41.93:0,42,1160	0/0:28,0:28:66.22:0,66,1842	0/0:39,0:35:96.31:0,96,2438	0/0:38,0:38:93.97:0,94,2577	0/0:52,0:50:99:0,132,3891	0/0:24,0:24:66.12:0,66,1960	0/0:24,0:24:55.43:0,55,1356	0/0:31,0:30:69.24:0,69,2067	0/0:30,0:28:57.18:0,57,1437	0/0:43,0:41:59.50:0,59,1634	0/0:29,0:29:71.77:0,72,1900	1/1:11,16:26:35.88:860,36,0	1/1:7,0:6:3.48:41,3,0	0/0:27,0:23:66.18:0,66,1868	0/0:24,0:24:65.50:0,65,1894	0/0:71,0:70:99:0,127,3194	0/0:29,0:28:71.70:0,72,1939	0/0:37,0:37:75.96:0,76,1970	0/0:28,0:27:44.49:0,44,1271	0/0:32,0:32:69.68:0,70,2076	0/0:34,0:33:96.32:0,96,2908	0/0:26,0:26:72.24:0,72,1975	0/1:4,0:5:8.37:8,0,195
chr10	28344899	.	G	GT	185.29	PASS	AB=0.700;AC=3;AF=0.054;AN=56;BaseQRankSum=4.935;DP=892;FS=6.113;HRun=2;HaplotypeScore=265.1937;InbreedingCoeff=0.7254;MQ=49.74;MQ0=20;MQRankSum=-4.381;QD=5.45;ReadPosRankSum=-1.227;VQSLOD=-0.2528;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:41:99:0,101,1277	0/0:11,0:11:29.35:0,29,331	0/0:36,0:17:45.13:0,45,560	0/0:55,0:24:60.60:0,61,739	0/0:38,0:38:99:0,107,1314	0/0:19,0:19:40.93:0,41,509	0/0:30,0:30:67.51:0,68,805	0/0:42,0:37:97.93:0,98,1162	0/0:36,0:36:93.05:0,93,1126	0/0:52,0:48:99:0,132,1671	0/0:23,0:23:66.11:0,66,833	0/0:23,0:23:54.58:0,55,651	0/0:32,0:31:60.03:0,60,792	0/0:30,0:28:57.17:0,57,718	0/0:44,0:41:58.68:0,59,672	0/0:29,0:29:71.97:0,72,848	1/1:23,4:26:5.69:244,6,0	0/1:4,2:5:0.69:35,0,1	0/0:27,0:23:66.17:0,66,833	0/0:26,0:26:59.88:0,60,730	0/0:68,0:67:99:0,126,1473	0/0:30,0:29:72.55:0,73,852	0/0:38,0:38:75.41:0,75,915	0/0:28,0:27:45.75:0,46,513	0/0:31,0:31:69.62:0,70,839	0/0:37,0:36:94.16:0,94,1122	0/0:25,0:25:71.44:0,71,849	0/0:5,0:5:8.88:0,9,133
chr10	28344919	.	TGTGA	T	4516.09	PASS	AB=1.000;AC=46;AF=0.821;AN=56;BaseQRankSum=-3.326;DP=825;FS=22.505;HRun=0;HaplotypeScore=295.0700;InbreedingCoeff=0.1763;MQ=44.73;MQ0=35;MQRankSum=5.653;QD=5.90;ReadPosRankSum=5.244;VQSLOD=2.2923;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:41,0:40:53.33:275,53,0	0/1:12,0:12:6.57:70,0,7	0/0:21,0:6:8.08:0,8,45	0/0:39,0:8:1.23:0,1,89	1/1:36,0:36:69.79:382,70,0	0/1:19,0:19:33.97:50,0,34	1/1:31,1:32:29.31:207,29,0	0/1:45,0:37:41.25:275,0,41	1/1:34,3:37:35.86:218,36,0	1/1:40,0:35:25.56:422,26,0	1/1:17,1:18:43.18:274,43,0	1/1:26,1:25:20.93:158,21,0	0/1:34,0:30:1.91:86,0,2	1/1:22,0:20:8.07:81,8,0	1/1:42,0:39:31.36:144,31,0	1/1:30,0:30:39.05:181,39,0	0/1:22,0:22:55.52:80,0,56	0/1:5,0:3:9.21:37,0,9	1/1:18,0:15:35.35:200,35,0	1/1:22,0:22:20.21:141,20,0	1/1:68,1:65:40.07:177,40,0	1/1:26,2:27:25.35:111,25,0	1/1:31,0:31:22.42:133,22,0	1/1:33,1:33:27.20:138,27,0	1/1:32,0:32:46.02:207,46,0	1/1:42,0:40:18.33:267,18,0	1/1:22,0:20:38.59:188,39,0	1/1:5,0:5:2.60:13,3,0
chr10	28344921	.	TGA	T	15176.47	PASS	AB=0.897;AC=49;AF=0.875;AN=56;BaseQRankSum=-1.173;DP=806;FS=10.979;HRun=0;HaplotypeScore=238.1755;InbreedingCoeff=0.4157;MQ=44.60;MQ0=35;MQRankSum=4.646;QD=20.24;ReadPosRankSum=3.428;VQSLOD=3.8463;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:15,26:40:68.99:864,69,0	1/1:0,12:12:26.96:354,27,0	0/0:19,0:5:8.05:0,8,44	0/0:37,0:7:1.23:0,1,84	1/1:16,19:35:81.04:1054,81,0	0/1:11,9:20:14.01:346,0,14	1/1:12,19:31:50.18:615,50,0	1/1:35,7:34:14.78:599,15,0	1/1:15,22:37:68.32:841,68,0	1/1:23,16:34:56.67:995,57,0	1/1:8,8:16:45.05:539,45,0	1/1:14,12:24:35.86:403,36,0	1/1:6,28:30:63.02:861,63,0	1/1:4,16:18:35.98:455,36,0	1/1:5,37:39:41.91:609,42,0	1/1:7,23:30:44.86:656,45,0	0/1:22,0:22:4.80:63,0,5	0/1:5,0:3:4.58:37,0,5	1/1:9,7:14:39.01:476,39,0	1/1:5,17:22:43.88:588,44,0	1/1:7,60:63:50.79:712,51,0	1/1:7,18:24:33.56:455,34,0	1/1:3,28:31:38.95:565,39,0	1/1:13,21:33:32.86:459,33,0	1/1:5,28:33:49.03:699,49,0	1/1:8,35:40:82.52:1136,83,0	1/1:7,15:20:51.12:690,51,0	1/1:4,1:5:10.99:108,11,0
chr10	28344959	.	TGA	T	251.86	PASS	AB=0.964;AC=13;AF=0.232;AN=56;BaseQRankSum=6.486;DP=709;FS=27.761;HRun=0;HaplotypeScore=290.4858;InbreedingCoeff=-0.1168;MQ=40.84;MQ0=32;MQRankSum=-5.753;QD=0.95;ReadPosRankSum=-4.569;VQSLOD=0.3278;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:28:35.81:0,36,614	0/1:9,2:10:99:105,0,115	0/0:9,0:2:0:0,0,0	0/1:23,0:9:6.54:7,0,40	0/0:34,0:33:35.67:0,36,579	0/1:28,1:28:14.54:15,0,379	0/0:29,3:32:32.51:0,33,423	0/1:36,1:26:60.94:61,0,342	0/1:31,1:31:9.50:9,0,633	0/1:32,1:28:47.78:48,0,711	0/1:13,0:13:3.97:4,0,256	0/0:28,0:26:12.15:0,12,587	0/0:35,1:33:22.74:0,23,910	0/1:25,1:23:35.02:35,0,323	0/0:22,1:22:7.66:0,8,334	0/0:31,0:30:25.67:0,26,639	1/1:9,0:9:1.23:17,1,0	0/0:2,0:1:0.89:0,1,2	0/0:24,0:15:14.20:0,14,462	0/0:28,0:27:26.69:0,27,412	0/0:56,2:54:46.52:0,47,821	0/0:31,1:31:25.13:0,25,490	0/0:26,0:26:29.30:0,29,465	0/0:24,4:28:18.77:0,19,380	0/0:22,0:22:15.52:0,16,297	0/1:29,1:27:42.87:43,0,571	0/1:15,1:14:22.48:22,0,303	0/1:7,0:7:28.65:29,0,163
chr10	28344963	.	TGTGA	T	1585.36	PASS	AB=0.988;AC=22;AF=0.393;AN=56;BaseQRankSum=2.199;DP=697;FS=18.423;HRun=0;HaplotypeScore=289.8021;InbreedingCoeff=-0.5694;MQ=42.16;MQ0=33;MQRankSum=-5.295;QD=3.01;ReadPosRankSum=-5.968;VQSLOD=0.0631;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,1:27:26.22:0,26,207	0/1:9,0:8:50.33:108,0,50	0/0:21,0:3:3.48:0,3,30	0/1:33,0:10:11.73:12,0,192	0/1:32,0:31:16.42:16,0,264	0/1:28,0:27:68.55:69,0,208	0/1:30,1:31:99:104,0,126	0/1:34,0:24:99:140,0,128	0/1:29,0:29:41.20:41,0,213	0/1:34,0:29:99:166,0,281	0/0:10,1:11:11.55:0,12,111	0/1:26,2:27:99:150,0,287	0/1:33,1:31:99:156,0,372	0/1:22,1:22:76.39:76,0,122	0/0:24,0:23:9.50:0,10,106	0/1:28,0:27:72.96:73,0,182	0/0:5,0:5:0.89:0,1,2	1/1:1,0:1:0.47:1,0,0	0/1:20,0:14:12.52:13,0,293	0/1:27,0:26:12.55:13,0,169	0/0:55,0:50:9.83:0,10,298	0/1:30,0:29:75.51:76,0,162	0/0:25,0:25:15.33:0,15,189	0/1:28,0:28:25.44:25,0,165	0/1:23,0:23:29.89:30,0,92	0/1:29,1:28:99:284,0,414	0/1:16,0:14:99:124,0,106	0/1:7,0:7:59.73:60,0,76
chr10	28344967	.	A	AGT	8310.95	PASS	AB=0.719;AC=46;AF=0.821;AN=56;BaseQRankSum=-4.833;DP=710;FS=5.828;HRun=0;HaplotypeScore=259.5443;InbreedingCoeff=0.2253;MQ=41.08;MQ0=37;MQRankSum=1.055;QD=13.03;ReadPosRankSum=1.724;VQSLOD=4.1662;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:21,8:26:11.93:193,12,0	0/1:8,1:8:14.98:41,0,15	0/0:27,0:3:2.96:0,3,28	0/0:43,0:11:20.64:0,21,209	0/1:11,18:28:13.45:272,0,13	0/1:13,15:25:29.50:215,0,30	1/1:15,15:30:26.78:407,27,0	1/1:31,5:24:31.97:353,32,0	0/1:17,10:26:12.38:364,0,12	1/1:23,16:34:34.80:893,35,0	1/1:5,5:10:6.02:99,6,0	1/1:18,12:29:23.44:589,23,0	1/1:21,12:31:42.41:751,42,0	1/1:14,10:23:23.93:293,24,0	1/1:19,7:25:9.50:147,9,0	1/1:14,15:28:26.15:443,26,0	1/1:5,0:5:0.47:1,0,0	1/1:1,0:1:0.47:1,0,0	1/1:18,4:16:16.11:274,16,0	0/1:11,13:23:12.86:226,0,13	1/1:39,15:50:29.94:464,30,0	1/1:15,14:28:27.09:436,27,0	1/1:12,10:22:17.91:297,18,0	1/1:21,8:29:17.94:232,18,0	1/1:12,9:21:4.61:89,5,0	0/1:18,8:26:0.82:632,0,1	1/1:10,8:14:26.88:404,27,0	1/1:4,3:7:12.04:195,12,0
chr10	28344977	.	TGTGA	T	358.11	PASS	AB=0.979;AC=21;AF=0.375;AN=56;BaseQRankSum=0.956;DP=777;FS=1.388;HRun=0;HaplotypeScore=298.9383;InbreedingCoeff=-0.3875;MQ=40.25;MQ0=43;MQRankSum=-0.871;QD=0.68;ReadPosRankSum=-5.658;VQSLOD=1.0192;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:21,1:20:35.25:35,0,55	0/0:12,0:9:10.08:0,10,31	0/0:43,0:6:10.16:0,10,56	0/1:65,0:12:18.34:18,0,306	0/1:32,0:29:26.43:26,0,197	0/1:34,0:27:37.28:37,0,172	0/1:33,0:32:30.61:31,0,217	0/0:37,0:26:45.37:0,45,470	0/1:28,1:27:7.98:8,0,366	0/0:40,0:35:74.18:0,74,879	0/0:11,0:10:5.97:0,6,90	0/1:34,1:32:34.62:35,0,310	0/1:29,1:28:67.44:67,0,279	0/1:25,0:22:12.58:13,0,107	0/1:26,1:25:32.35:32,0,109	0/0:30,0:29:6.89:0,7,329	1/1:5,0:4:0.47:1,0,0	1/1:1,0:1:0.47:1,0,0	0/1:20,1:13:30.33:30,0,319	0/0:25,1:24:23.45:0,23,300	0/1:53,0:48:86.78:87,0,275	0/0:29,0:25:23.03:0,23,276	0/0:21,3:22:20.55:0,21,293	0/1:30,1:30:10:10,0,164	0/1:20,1:18:13.23:13,0,30	0/1:29,1:26:2.94:3,0,466	0/1:21,0:16:5.85:6,0,138	0/1:9,0:9:52.29:52,0,55
chr10	28344987	.	A	AGT	436.93	PASS	AB=0.914;AC=13;AF=0.250;AN=52;BaseQRankSum=4.093;DP=843;FS=45.639;HRun=0;HaplotypeScore=318.4416;InbreedingCoeff=-0.3732;MQ=37.87;MQ0=57;MQRankSum=-5.976;QD=1.17;ReadPosRankSum=-2.298;VQSLOD=1.0694;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:23,1:20:4.43:4,0,33	0/1:6,3:7:16.48:94,0,16	0/0:66,0:8:0.11:0,0,67	0/0:82,0:14:26.73:0,27,262	0/0:29,3:29:11.35:0,11,152	0/1:27,9:29:83.09:83,0,136	0/0:29,2:30:19.90:0,20,287	0/1:45,1:38:14.90:15,0,758	0/1:33,2:33:68.03:68,0,220	0/1:38,4:36:31.11:31,0,687	0/0:16,0:14:3.13:0,3,40	0/1:27,7:30:18.14:18,0,284	0/0:28,2:27:3.47:0,3,246	0/1:27,1:24:66.50:106,0,66	0/0:24,2:22:0.79:0,1,105	0/1:28,0:28:14.81:15,0,358	./.	./.	0/0:27,1:19:36.47:0,36,423	0/0:23,4:24:18.16:0,18,199	0/0:40,1:37:22.40:0,22,273	0/0:25,5:26:30.46:0,30,332	0/1:21,2:20:28.69:29,0,186	0/0:29,1:29:14.31:0,14,193	0/0:19,4:19:7.87:0,8,58	0/1:31,3:28:86.49:86,0,443	0/1:26,3:22:21.77:22,0,258	0/1:6,0:6:4.02:4,0,60
chr10	28345009	.	C	CTG	4624.51	PASS	AB=0.874;AC=48;AF=0.857;AN=56;BaseQRankSum=-2.859;DP=893;FS=31.774;HRun=0;HaplotypeScore=278.4295;InbreedingCoeff=0.2292;MQ=36.78;MQ0=71;MQRankSum=1.135;QD=6.13;ReadPosRankSum=-3.468;VQSLOD=2.5546;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:24,4:22:13.85:70,14,0	1/1:4,4:6:10.58:148,11,0	0/0:60,0:5:0.35:0,0,16	0/0:79,0:6:4.83:0,5,44	1/1:40,5:41:15.38:115,15,0	1/1:24,9:26:33.88:326,34,0	0/1:27,3:28:0.19:190,0,0	1/1:55,0:42:70.14:625,70,0	1/1:26,6:30:14.38:237,14,0	1/1:43,4:41:20.73:375,21,0	1/1:21,3:21:5.55:26,6,0	0/1:29,8:34:0.77:135,0,1	1/1:26,3:24:13.27:166,13,0	1/1:27,5:28:20.25:162,20,0	0/1:25,2:21:8.20:124,0,8	1/1:34,1:35:24.14:209,24,0	1/1:5,1:5:3.01:50,3,0	1/1:2,0:2:1.82:5,2,0	1/1:25,4:20:24.59:248,25,0	1/1:23,4:24:28.88:231,29,0	1/1:44,1:40:33.43:170,33,0	1/1:26,7:28:4.95:156,5,0	0/1:16,4:17:3.83:107,0,4	1/1:31,0:28:22.17:106,22,0	1/1:23,3:21:7.60:130,8,0	1/1:35,4:32:36.43:368,36,0	1/1:24,4:23:1.40:121,1,0	1/1:6,0:6:7.02:22,7,0
chr10	28345016	.	TGTGA	T	4165.67	PASS	AB=0.942;AC=24;AF=0.429;AN=56;BaseQRankSum=-8.421;DP=900;FS=14.925;HRun=0;HaplotypeScore=289.1632;InbreedingCoeff=-0.6705;MQ=36.07;MQ0=68;MQRankSum=0.572;QD=5.51;ReadPosRankSum=-8.211;VQSLOD=-0.1314;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:29,2:25:14.84:43,0,15	0/1:7,1:6:7.25:106,0,7	0/0:48,0:4:0.37:0,0,16	0/0:60,0:4:5.85:0,6,80	0/1:33,11:40:68.62:91,0,69	0/1:29,3:25:61.53:245,0,62	0/1:30,1:29:81.55:82,0,110	0/1:57,0:43:88.69:89,0,288	0/1:30,2:30:94.09:293,0,94	0/1:45,3:42:99:530,0,256	0/0:12,14:23:3.32:0,3,18	0/1:35,1:33:99:170,0,181	0/1:25,4:24:99:201,0,103	0/1:32,3:31:39.85:141,0,40	0/1:30,4:28:67.41:274,0,67	0/1:34,2:36:99:120,0,144	0/0:6,0:5:5.61:0,6,46	0/0:4,0:3:5.95:0,6,55	0/1:30,0:19:56.47:56,0,116	0/1:29,1:26:29.31:245,0,29	0/1:46,0:40:22.14:66,0,22	0/1:35,0:29:81.31:194,0,81	0/1:21,1:19:16.52:189,0,17	0/1:28,3:29:32.24:160,0,32	1/1:22,6:23:14.70:291,15,0	0/1:42,1:36:99:447,0,126	0/1:28,0:23:99:104,0,206	0/1:8,1:9:29.76:30,0,49
chr10	28345026	.	A	AGT	55.40	PASS	AB=0.949;AC=10;AF=0.200;AN=50;BaseQRankSum=-0.897;DP=840;FS=1.225;HRun=0;HaplotypeScore=279.2053;InbreedingCoeff=0.0014;MQ=34.84;MQ0=63;MQRankSum=0.631;QD=0.22;ReadPosRankSum=-0.312;VQSLOD=2.2772;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:27:3.27:0,3,31	0/0:8,0:6:1.25:0,1,3	./.	./.	0/0:39,0:35:6.31:0,6,56	0/0:28,0:22:11.53:0,12,102	0/1:31,0:29:9.72:10,0,50	0/1:53,0:36:0:0,0,0	0/0:33,0:33:16.09:0,16,130	0/0:48,0:42:0.97:0,1,204	0/1:27,0:24:0:0,0,0	0/0:33,0:30:7.62:0,8,67	0/1:28,0:23:3.10:3,0,85	0/0:34,0:30:6.13:0,6,25	0/1:33,0:28:9.60:10,0,129	0/1:35,0:37:14.02:14,0,58	0/1:3,7:8:15.72:80,0,16	1/1:4,1:4:3.01:44,3,0	./.	0/1:28,0:25:1.62:2,0,76	0/0:43,0:36:10.36:0,10,120	0/0:33,0:27:13.83:0,14,100	0/0:22,0:20:5.29:0,5,118	0/0:29,0:26:14.24:0,14,133	0/0:23,0:19:0.26:0,0,148	0/0:38,0:30:3.25:0,3,80	0/0:31,0:26:12.05:0,12,108	0/0:11,0:10:1.14:0,1,22
chr10	28345155	.	A	AT	24671.77	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=5.058;DP=741;FS=0.766;HRun=3;HaplotypeScore=157.6937;InbreedingCoeff=0.9987;MQ=63.09;MQ0=0;MQRankSum=-7.449;QD=34.70;ReadPosRankSum=5.500;VQSLOD=3.6893;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,33:33:87.29:1183,87,0	1/1:0,13:13:33.11:461,33,0	0/0:16,0:16:42.10:0,42,491	0/0:13,0:14:32.76:0,33,372	1/1:3,38:41:99:1400,108,0	1/1:2,25:26:63.21:880,63,0	1/1:3,28:31:72.24:1005,72,0	1/1:0,25:25:75.24:1026,75,0	1/1:0,23:23:57.19:781,57,0	1/1:4,33:37:99:1384,99,0	1/1:1,29:31:87.25:1182,87,0	1/1:0,35:33:84.28:1157,84,0	1/1:0,20:18:42.14:580,42,0	1/1:2,27:29:69.23:964,69,0	1/1:1,31:31:72.24:1005,72,0	1/1:1,24:25:69.23:956,69,0	1/1:3,18:21:51.17:704,51,0	1/1:0,11:11:30.10:419,30,0	1/1:3,16:17:39.12:529,39,0	1/1:3,41:44:99:1654,120,0	1/1:2,13:15:33.11:461,33,0	1/1:3,36:39:96.23:1298,96,0	1/1:3,37:39:99:1426,102,0	1/1:2,23:25:60.20:838,60,0	1/1:1,22:23:57.19:797,57,0	1/1:1,25:25:72.24:1000,72,0	1/1:2,30:31:87.29:1202,87,0	1/1:0,10:10:27.09:378,27,0
chr10	28346853	.	A	AT	20599.83	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-8.722;DP=669;FS=6.832;HRun=6;HaplotypeScore=56.3780;InbreedingCoeff=0.9757;MQ=82.28;MQ0=0;MQRankSum=-9.631;QD=32.85;ReadPosRankSum=4.834;VQSLOD=4.8354;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,16:17:45.14:566,45,0	1/1:0,19:19:54.17:679,54,0	0/0:21,0:22:35.29:0,35,484	0/0:20,0:20:45.10:0,45,457	1/1:2,29:31:87.24:1077,87,0	1/1:1,23:24:66.21:830,66,0	1/1:1,17:18:51.16:635,51,0	1/1:4,36:40:99:1346,108,0	1/1:2,26:28:78.25:979,78,0	1/1:5,26:31:78.23:958,78,0	1/1:0,21:21:60.15:737,60,0	1/1:1,20:21:57.18:717,57,0	1/1:2,23:25:66.21:830,66,0	1/1:4,18:22:51.12:624,51,0	1/1:6,30:36:90.28:1121,90,0	1/1:2,30:32:90.29:1132,90,0	1/1:2,15:17:45.14:566,45,0	1/1:3,5:8:12.04:151,12,0	1/1:2,19:21:57.14:687,57,0	1/1:0,41:41:99:1361,111,0	1/1:3,12:15:33.11:415,33,0	1/1:1,31:32:87.28:1094,87,0	1/1:1,25:26:72.23:906,72,0	1/1:0,7:7:15.05:189,15,0	1/1:2,34:36:81.26:1019,81,0	1/1:3,19:22:57.13:698,57,0	1/1:3,25:28:75.24:943,75,0	1/1:0,9:9:27.09:340,27,0
chr10	28347231	.	AC	A	23431.91	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-5.858;DP=737;FS=11.826;HRun=3;HaplotypeScore=76.3135;InbreedingCoeff=0.9984;MQ=80.69;MQ0=0;MQRankSum=-10.364;QD=33.67;ReadPosRankSum=6.184;VQSLOD=4.1924;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,45:45:99:1450,117,0	1/1:1,10:11:27.08:332,27,0	0/0:24,0:24:69.11:0,69,934	0/0:17,0:17:45.10:0,45,595	1/1:1,32:33:87.17:1043,87,0	1/1:0,34:34:99:1227,99,0	1/1:4,28:32:72.22:892,72,0	1/1:2,29:31:84.24:1018,84,0	1/1:0,23:23:63.20:781,63,0	1/1:1,22:23:66.21:818,66,0	1/1:2,19:21:57.18:703,57,0	1/1:1,35:36:99:1301,105,0	1/1:4,27:31:72.23:889,72,0	1/1:0,26:26:60.19:744,60,0	1/1:0,37:37:99:1227,99,0	1/1:1,23:24:69.22:855,69,0	1/1:0,23:23:66.21:817,66,0	1/1:0,14:14:39.12:483,39,0	1/1:0,16:16:48.13:572,48,0	1/1:0,30:30:87.21:1059,87,0	1/1:1,30:31:78.25:967,78,0	1/1:0,27:27:81.21:987,81,0	1/1:0,19:19:57.18:706,57,0	1/1:1,34:35:99:1227,99,0	1/1:0,29:29:81.25:1004,81,0	1/1:0,37:37:99:1363,111,0	1/1:0,20:20:54.17:669,54,0	1/1:0,8:8:24.08:297,24,0
chr10	28347320	.	GCA	G	206.08	PASS	AB=0.890;AC=11;AF=0.196;AN=56;BaseQRankSum=4.614;DP=833;FS=10.305;HRun=0;HaplotypeScore=192.5853;InbreedingCoeff=-0.0358;MQ=59.48;MQ0=8;MQRankSum=1.093;QD=0.76;ReadPosRankSum=1.980;VQSLOD=2.0242;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,1:35:63.14:0,63,764	0/1:11,1:12:8.44:8,0,260	0/0:37,0:23:18.06:0,18,274	0/0:43,0:18:5.20:0,5,155	0/0:38,2:41:8.06:0,8,899	0/0:33,2:35:7.12:0,7,784	0/0:29,0:30:47.10:0,47,664	0/0:34,0:34:57.61:0,58,634	0/0:25,1:26:21.66:0,22,606	0/0:30,1:31:25.57:0,26,586	0/0:30,1:31:30.65:0,31,730	0/1:39,4:43:17.46:17,0,888	0/1:27,3:30:37.47:37,0,648	0/1:24,2:26:16.91:17,0,524	0/0:36,2:39:5:0,5,870	0/0:27,0:27:60.19:0,60,723	0/1:9,0:13:23.32:23,0,28	1/1:8,0:15:11.32:55,11,0	0/0:15,0:15:19.30:0,19,222	0/0:35,2:37:13.61:0,14,856	0/1:35,6:41:99:123,0,770	0/0:30,2:32:16.19:0,16,907	0/1:26,3:29:1.03:1,0,643	0/0:23,0:23:48.13:0,48,567	0/1:22,2:24:7.87:8,0,612	0/1:32,4:36:58.73:59,0,701	0/0:31,0:31:41.35:0,41,784	0/0:16,0:16:39.12:0,39,480
chr10	28347612	.	CG	C	22801.62	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=4.757;DP=714;FS=10.238;HRun=2;HaplotypeScore=74.0912;InbreedingCoeff=0.9994;MQ=76.88;MQ0=0;MQRankSum=-1.752;QD=36.31;ReadPosRankSum=2.996;VQSLOD=5.0621;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,52:55:99:1945,150,0	1/1:0,10:10:30.10:389,30,0	0/0:10,0:10:27.06:0,27,348	0/0:18,0:18:41.72:0,42,559	1/1:0,16:16:45.15:583,45,0	1/1:0,28:28:78.25:1013,78,0	1/1:0,33:33:87.28:1129,87,0	1/1:0,33:33:99:1284,99,0	1/1:0,26:26:75.24:973,75,0	1/1:0,20:20:60.19:778,60,0	1/1:0,22:22:63.20:805,63,0	1/1:0,24:24:69.22:895,69,0	1/1:0,24:24:72.23:933,72,0	1/1:0,26:26:72.23:930,72,0	1/1:1,26:27:72.23:935,72,0	1/1:0,30:30:84.27:1091,84,0	0/0:35,0:35:99:0,105,1530	0/0:23,0:23:66.19:0,66,964	1/1:0,26:26:75.24:971,75,0	1/1:2,25:27:69.22:889,69,0	1/1:2,23:25:75.23:957,75,0	1/1:1,27:28:75.24:973,75,0	1/1:0,23:23:60.19:778,60,0	1/1:0,26:26:75.24:974,75,0	1/1:1,28:29:69.22:896,69,0	1/1:0,30:30:90.29:1164,90,0	1/1:0,30:30:87.28:1128,87,0	1/1:0,10:10:30.10:389,30,0
chr10	28347834	.	G	GC	16913.10	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-0.936;DP=613;FS=27.734;HRun=7;HaplotypeScore=109.6963;InbreedingCoeff=0.9660;MQ=85.01;MQ0=0;MQRankSum=-9.315;QD=29.72;ReadPosRankSum=5.158;VQSLOD=3.0700;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,31:37:81.25:978,81,0	1/1:4,11:16:29.96:341,30,0	0/0:16,0:16:30.04:0,30,288	0/0:28,0:28:63.15:0,63,586	1/1:3,26:29:11.89:704,12,0	1/1:0,23:23:66.20:797,66,0	1/1:3,25:28:66.20:797,66,0	1/1:6,21:27:69.20:821,69,0	1/1:2,20:22:51.16:615,51,0	1/1:5,17:22:45.10:518,45,0	1/1:3,13:16:36.11:434,36,0	1/1:1,28:29:78.24:939,78,0	1/1:0,20:20:54.17:652,54,0	1/1:0,20:20:60.18:725,60,0	1/1:1,31:32:87.27:1050,87,0	1/1:3,18:21:45.14:544,45,0	1/1:0,19:19:48.15:580,48,0	1/1:3,8:11:21.06:254,21,0	1/1:3,16:19:51.11:587,51,0	1/1:3,18:21:54.15:639,54,0	1/1:0,26:26:78.24:942,78,0	1/1:1,17:18:42.13:507,42,0	1/1:2,21:23:54.17:652,54,0	1/1:4,19:23:54.17:652,54,0	1/1:1,16:17:42.12:496,42,0	1/1:0,29:29:87.27:1051,87,0	1/1:1,15:16:42.13:507,42,0	1/1:2,3:5:12.02:132,12,0
chr10	28349003	.	T	TC	4291.17	PASS	AB=0.667;AC=45;AF=0.865;AN=52;BaseQRankSum=-3.986;DP=223;FS=50.265;HRun=0;HaplotypeScore=77.4249;InbreedingCoeff=0.6902;MQ=41.93;MQ0=48;MQRankSum=-1.764;QD=23.45;ReadPosRankSum=1.438;VQSLOD=1.9034;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,7:9:9.24:170,9,0	1/1:1,2:2:6.02:74,6,0	0/0:14,0:3:7.75:0,8,51	0/0:13,0:3:8.93:0,9,65	1/1:1,12:12:29.66:269,30,0	1/1:5,6:6:17.97:202,18,0	1/1:1,5:5:15.05:185,15,0	1/1:3,5:5:15.01:170,15,0	1/1:1,8:8:24.08:296,24,0	1/1:4,8:8:20.99:244,21,0	1/1:3,7:7:15.05:184,15,0	1/1:0,5:5:15.05:185,15,0	1/1:0,5:5:12.04:148,12,0	1/1:0,6:6:14.98:165,15,0	1/1:2,6:6:17.99:203,18,0	1/1:1,4:4:12.04:148,12,0	0/0:8,0:5:11.07:0,11,35	./.	1/1:1,6:6:18.06:224,18,0	1/1:2,6:6:17.99:203,18,0	1/1:2,2:2:5.88:36,6,0	1/1:1,3:3:9.03:111,9,0	1/1:0,5:5:12.04:147,12,0	0/1:3,3:4:0.58:60,0,1	1/1:1,5:5:15.05:185,15,0	1/1:2,11:12:33.05:392,33,0	1/1:5,8:11:17.19:289,17,0	./.
chr10	28357393	.	C	CT	2841.83	PASS	AB=1.000;AC=47;AF=0.839;AN=56;BaseQRankSum=-3.363;DP=316;FS=6.299;HRun=14;HaplotypeScore=63.8074;InbreedingCoeff=0.4528;MQ=72.45;MQ0=0;MQRankSum=-3.195;QD=10.11;ReadPosRankSum=0.891;VQSLOD=3.0814;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:11:29.25:178,29,0	0/1:7,0:7:7.47:44,0,7	0/0:20,0:15:23.10:0,23,130	0/1:16,0:12:9.63:10,0,35	1/1:19,0:19:34.68:199,35,0	1/1:9,0:9:20.65:131,21,0	1/1:12,0:12:32.04:195,32,0	1/1:18,0:18:20.75:177,21,0	1/1:13,0:13:29.24:175,29,0	1/1:10,0:10:20.11:115,20,0	1/1:21,0:21:36.77:226,37,0	1/1:11,1:12:23.51:155,24,0	0/1:11,0:11:1.41:86,0,1	1/1:10,0:10:17.32:101,17,0	1/1:13,0:13:23.28:141,23,0	1/1:12,0:12:6.82:114,7,0	0/0:9,0:10:2.05:0,2,52	0/0:4,0:4:8.87:0,9,58	1/1:7,1:8:16.88:90,17,0	1/1:11,0:11:26.16:151,26,0	1/1:2,0:2:2.80:13,3,0	1/1:15,0:15:28.89:163,29,0	1/1:9,0:9:0.80:67,1,0	1/1:6,0:6:5.72:30,6,0	1/1:5,0:5:11.82:78,12,0	1/1:16,2:18:23.83:215,24,0	1/1:6,0:7:8.03:68,8,0	1/1:5,0:5:11.54:62,12,0
chr10	28357404	.	T	TC	7549.62	PASS	AB=1.000;AC=51;AF=0.911;AN=56;BaseQRankSum=-7.189;DP=375;FS=5.010;HRun=0;HaplotypeScore=46.5136;InbreedingCoeff=0.4158;MQ=72.48;MQ0=0;MQRankSum=-2.327;QD=21.76;ReadPosRankSum=4.085;VQSLOD=6.1498;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,12:14:32.96:363,33,0	1/1:2,4:7:8.33:124,8,0	0/0:28,0:19:39.50:0,40,419	0/1:17,0:10:4.10:4,0,113	1/1:0,17:18:39.85:437,40,0	1/1:5,8:13:26.93:293,27,0	1/1:3,13:17:32.49:403,32,0	1/1:1,17:18:51.55:581,52,0	1/1:1,12:13:33.05:382,33,0	1/1:0,9:9:27.07:315,27,0	1/1:2,16:18:33.17:437,33,0	1/1:4,8:12:29.91:316,30,0	1/1:8,5:13:28.32:293,28,0	1/1:4,7:12:13.28:224,13,0	1/1:6,10:16:35.71:360,36,0	1/1:4,12:16:23.37:295,23,0	0/1:15,0:15:1.44:171,0,1	0/1:7,0:7:0.93:16,0,1	1/1:1,12:13:35.56:343,36,0	1/1:0,17:17:41.76:425,42,0	1/1:2,0:2:5.95:55,6,0	1/1:0,18:18:38.83:416,39,0	1/1:3,10:13:1.73:202,2,0	1/1:1,7:8:8.95:93,9,0	1/1:2,5:7:12.01:148,12,0	1/1:4,14:18:48.92:530,49,0	1/1:1,10:11:13.28:152,13,0	1/1:1,4:5:15.02:172,15,0
chr10	28357542	.	CTAAT	C	18257.24	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=1.374;DP=458;FS=0.736;HRun=0;HaplotypeScore=121.5637;InbreedingCoeff=0.8652;MQ=78.99;MQ0=3;MQRankSum=-8.960;QD=43.06;ReadPosRankSum=4.830;VQSLOD=5.2376;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,28:29:66.23:1228,66,0	1/1:0,3:3:9.03:168,9,0	0/0:17,0:17:41.65:0,42,1037	0/0:17,0:17:48.16:0,48,1180	1/1:2,16:18:48.16:888,48,0	1/1:0,11:11:33.11:615,33,0	1/1:3,21:24:60.21:1119,60,0	1/1:4,17:21:51.17:951,51,0	1/1:0,13:13:33.11:613,33,0	1/1:1,19:20:57.19:1036,57,0	1/1:2,11:13:33.11:615,33,0	1/1:2,14:16:33.11:606,33,0	1/1:4,18:21:42.14:782,42,0	1/1:1,20:21:39.13:728,39,0	1/1:1,20:21:57.20:1061,57,0	1/1:1,16:17:39.13:727,39,0	1/1:3,18:21:42.14:784,42,0	1/1:1,5:6:9.03:168,9,0	1/1:6,9:15:27.09:492,27,0	1/1:1,20:21:57.20:1055,57,0	1/1:2,17:19:36.12:668,36,0	1/1:0,12:12:33.11:615,33,0	1/1:3,17:20:48.16:873,48,0	1/1:2,11:13:26.84:484,27,0	1/1:0,13:13:33.11:615,33,0	1/1:2,15:16:45.13:804,45,0	1/1:1,13:14:26.90:504,27,0	1/1:0,3:3:3.01:56,3,0
chr10	28357832	.	TAC	T	1102.03	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=4.445;DP=664;FS=7.959;HRun=0;HaplotypeScore=84.2796;InbreedingCoeff=0.9095;MQ=83.80;MQ0=0;MQRankSum=-2.099;QD=38.00;ReadPosRankSum=0.409;VQSLOD=5.5637;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:39.09:0,39,750	0/0:5,0:5:15.05:0,15,305	0/0:17,0:17:48.15:0,48,923	0/0:33,0:33:93.08:0,93,1814	0/0:21,0:21:60.21:0,60,1217	0/0:34,0:34:99:0,102,2071	0/0:20,0:20:60.21:0,60,1218	0/0:35,0:35:99:0,105,2080	0/0:23,0:23:66.17:0,66,1263	0/0:43,0:43:99:0,129,2559	0/0:20,0:20:57.18:0,57,1114	0/0:29,0:29:87.30:0,87,1765	0/0:27,0:27:81.28:0,81,1635	0/0:31,0:31:93.32:0,93,1850	0/0:30,0:30:90.30:0,90,1783	0/0:29,0:29:87.28:0,87,1732	1/1:0,14:14:39.13:636,39,0	1/1:0,15:15:36.12:587,36,0	0/0:21,0:21:63.22:0,63,1263	0/0:32,0:32:96.33:0,96,1942	0/0:16,0:16:48.15:0,48,939	0/0:25,0:25:69.24:0,69,1379	0/0:34,0:34:99:0,99,2003	0/0:28,0:28:78.27:0,78,1557	0/0:19,0:19:54.19:0,54,1084	0/0:23,0:23:66.23:0,66,1325	0/0:26,0:26:78.25:0,78,1536	0/0:1,0:1:3.01:0,3,61
chr10	28357937	.	A	AT	30338.62	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-6.575;DP=726;FS=12.826;HRun=0;HaplotypeScore=91.9747;InbreedingCoeff=0.9987;MQ=69.12;MQ0=0;MQRankSum=-5.010;QD=43.97;ReadPosRankSum=5.458;VQSLOD=3.5791;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,25:26:72.23:1149,72,0	1/1:0,11:11:33.11:527,33,0	0/0:17,0:16:48.14:0,48,639	0/0:19,0:16:33.13:0,33,431	1/1:0,30:30:84.29:1342,84,0	1/1:0,25:25:69.24:1103,69,0	1/1:0,17:17:48.16:767,48,0	1/1:0,30:30:90.27:1370,90,0	1/1:0,28:28:78.27:1247,78,0	1/1:0,36:36:99:1680,108,0	1/1:1,28:29:72.16:1096,72,0	1/1:0,30:30:84.29:1343,84,0	1/1:0,34:34:87.29:1390,87,0	1/1:0,34:34:99:1581,99,0	1/1:1,22:24:66.22:1043,66,0	1/1:0,32:32:84.29:1343,84,0	1/1:1,15:16:42.14:671,42,0	1/1:4,20:24:66.22:1017,66,0	1/1:2,17:19:51.16:788,51,0	1/1:0,37:37:99:1656,105,0	1/1:0,19:19:54.18:863,54,0	1/1:0,28:28:81.28:1294,81,0	1/1:0,32:32:87.21:1359,87,0	1/1:1,28:29:84.29:1343,84,0	1/1:1,25:26:69.10:1032,69,0	1/1:0,34:34:99:1608,102,0	1/1:2,28:30:84.29:1342,84,0	1/1:0,10:10:24.08:384,24,0
chr10	28358981	.	CAAA	C	7454.84	PASS	AB=0.808;AC=52;AF=0.929;AN=56;BaseQRankSum=-5.842;DP=511;FS=11.581;HRun=16;HaplotypeScore=85.9780;InbreedingCoeff=-0.0002;MQ=72.48;MQ0=1;MQRankSum=-1.372;QD=14.59;ReadPosRankSum=4.057;VQSLOD=2.3615;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,7:17:13.77:238,14,0	1/1:1,10:11:30.06:323,30,0	0/1:17,0:15:9.12:9,0,148	0/1:18,0:11:12.68:13,0,238	1/1:4,22:30:26.92:330,27,0	1/1:5,22:30:56.83:611,57,0	1/1:1,5:6:12.01:129,12,0	1/1:9,17:29:55.73:511,56,0	1/1:4,11:16:11.81:242,12,0	1/1:8,12:21:27.38:327,27,0	1/1:7,22:32:58.04:607,58,0	1/1:5,11:16:20.94:225,21,0	1/1:9,7:17:20.57:206,21,0	1/1:5,11:16:10.98:155,11,0	1/1:3,12:18:34.38:313,34,0	1/1:4,13:17:17.83:194,18,0	0/1:1,1:8:4.70:23,0,5	0/1:6,2:9:23.01:23,0,38	1/1:6,11:18:11.63:322,12,0	1/1:10,14:26:17.42:351,17,0	1/1:4,9:13:23.63:256,24,0	1/1:4,12:18:31.06:318,31,0	1/1:7,12:21:32.67:326,33,0	1/1:4,8:13:14.80:147,15,0	1/1:3,14:19:28.41:306,28,0	1/1:3,12:17:32.70:324,33,0	1/1:4,22:28:43.29:467,43,0	1/1:3,5:9:13.44:159,13,0
chr10	28359507	.	G	GCC	23117.84	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=10.008;DP=616;FS=1.894;HRun=0;HaplotypeScore=186.0621;InbreedingCoeff=0.9482;MQ=89.12;MQ0=0;MQRankSum=-10.903;QD=40.99;ReadPosRankSum=6.779;VQSLOD=4.8948;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,40:41:99:1805,120,0	1/1:1,12:13:39.13:576,39,0	0/0:26,0:26:72.25:0,72,1165	0/0:26,0:26:66.19:0,66,1036	1/1:1,30:31:84.25:1121,84,0	1/1:0,19:19:57.18:793,57,0	1/1:1,11:12:36.10:513,36,0	1/1:4,11:15:45.11:544,45,0	1/1:3,26:29:87.25:1260,87,0	1/1:1,14:15:45.14:617,45,0	1/1:2,16:18:48.07:652,48,0	1/1:2,12:14:42.13:604,42,0	1/1:3,33:36:99:1441,108,0	1/1:3,21:24:72.24:1116,72,0	1/1:2,27:29:84.27:1211,84,0	1/1:3,29:32:96.26:1440,96,0	1/1:2,25:27:77.25:1066,77,0	1/1:0,12:12:36.12:545,36,0	1/1:4,15:19:51.39:727,51,0	1/1:2,20:22:66.21:938,66,0	1/1:1,14:15:36.12:533,36,0	1/1:2,19:21:54.16:807,54,0	1/1:1,14:15:42.13:560,42,0	1/1:3,27:30:78.09:1119,78,0	1/1:2,21:23:66.18:968,66,0	1/1:1,18:19:57.16:811,57,0	1/1:0,31:31:92.96:1277,93,0	1/1:0,2:2:6.02:74,6,0
chr10	28359508	.	GA	G	12483.14	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=11.196;DP=614;FS=3.166;HRun=1;HaplotypeScore=212.9380;InbreedingCoeff=0.9463;MQ=89.20;MQ0=0;MQRankSum=-10.606;QD=22.21;ReadPosRankSum=8.050;VQSLOD=4.4529;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,40:41:99:1019,116,0	1/1:1,12:13:38.22:315,38,0	0/0:26,0:26:78.25:0,78,1198	0/0:26,0:26:69.15:0,69,999	1/1:0,30:30:79.17:585,79,0	1/1:0,19:19:56.07:431,56,0	1/1:0,11:11:32.60:279,33,0	1/1:3,11:14:26.20:149,26,0	1/1:3,26:29:81.69:682,82,0	1/1:1,14:15:44.18:352,44,0	1/1:2,16:18:46.65:360,47,0	1/1:3,12:15:41.39:338,41,0	1/1:3,33:36:99:765,102,0	1/1:3,21:24:40.57:555,41,0	1/1:2,27:29:82.30:666,82,0	1/1:3,29:32:91.30:807,91,0	1/1:1,25:26:74.09:606,74,0	1/1:0,12:12:35.84:317,36,0	1/1:2,15:17:37.78:335,38,0	1/1:2,20:22:65.08:519,65,0	1/1:2,14:16:38.53:326,39,0	1/1:4,19:23:47.20:462,47,0	1/1:1,14:15:40.64:292,41,0	1/1:3,27:30:70.29:629,70,0	1/1:2,21:23:54.82:513,55,0	1/1:0,18:19:55.11:452,55,0	1/1:0,31:31:83.89:692,84,0	1/1:0,2:2:5.88:36,6,0
chr10	28360548	.	AT	A	7348.08	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-1.822;DP=493;FS=5.635;HRun=3;HaplotypeScore=85.0302;InbreedingCoeff=0.8380;MQ=72.67;MQ0=1;MQRankSum=-0.700;QD=17.05;ReadPosRankSum=1.125;VQSLOD=4.4544;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:20,1:21:35.39:268,35,0	1/1:6,0:6:11.75:75,12,0	0/0:18,0:14:3.02:0,3,107	0/0:11,0:8:6.85:0,7,46	1/1:21,3:24:48.16:379,48,0	1/1:13,0:13:34.69:233,35,0	1/1:9,1:11:22.43:142,22,0	1/1:36,4:40:92.78:768,93,0	1/1:8,0:8:14.87:108,15,0	1/1:26,3:29:78.19:645,78,0	1/1:14,0:14:37.82:315,38,0	1/1:15,3:18:30.75:249,31,0	1/1:1,14:15:13.65:147,14,0	1/1:11,1:12:29.76:237,30,0	1/1:23,0:23:52.83:405,53,0	1/1:17,0:17:19.47:292,19,0	0/0:19,0:19:41.12:0,41,240	0/0:14,0:14:26.41:0,26,175	1/1:16,1:17:30.76:304,31,0	1/1:20,1:21:50.43:346,50,0	1/1:2,8:10:3.01:36,3,0	1/1:18,2:20:53.61:488,54,0	1/1:17,5:22:53.56:477,54,0	1/1:11,0:11:22.14:153,22,0	1/1:21,2:23:51.85:389,52,0	1/1:24,0:24:51.15:384,51,0	1/1:26,0:26:63.59:462,64,0	1/1:2,4:6:8.58:46,9,0
chr10	28360567	.	A	AC	9983.52	PASS	AB=1.000;AC=49;AF=0.875;AN=56;BaseQRankSum=-1.886;DP=563;FS=11.589;HRun=1;HaplotypeScore=93.4443;InbreedingCoeff=0.8925;MQ=70.70;MQ0=0;MQRankSum=-2.442;QD=19.61;ReadPosRankSum=-1.109;VQSLOD=3.6558;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:17,1:18:39.70:363,40,0	1/1:9,0:9:20.41:162,20,0	0/0:17,0:15:26.96:0,27,200	0/1:6,0:5:1.89:2,0,28	1/1:39,1:40:77.83:591,78,0	1/1:19,1:21:53.49:474,53,0	1/1:11,3:14:34.39:272,34,0	1/1:35,2:37:87.60:691,88,0	1/1:17,0:17:43.84:377,44,0	1/1:35,2:37:89.57:775,90,0	1/1:19,0:19:43.86:353,44,0	1/1:21,1:22:43.55:381,44,0	1/1:17,0:17:43.20:351,43,0	1/1:15,1:16:35.46:278,35,0	1/1:21,0:21:59.09:467,59,0	1/1:16,1:17:47.55:374,48,0	0/0:22,0:22:56.40:0,56,408	0/0:15,0:15:29.70:0,30,208	1/1:21,1:22:58.51:472,59,0	1/1:29,2:31:85.02:709,85,0	1/1:6,1:7:20.91:181,21,0	1/1:15,1:16:35.51:303,36,0	1/1:20,2:22:64.18:549,64,0	1/1:13,0:13:28.20:208,28,0	1/1:28,2:30:69.26:539,69,0	1/1:24,2:27:71.10:582,71,0	1/1:23,1:24:62.98:464,63,0	1/1:6,0:6:11.48:64,11,0
chr10	28362073	.	TC	T	720.76	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.043;DP=787;FS=3.045;HRun=1;HaplotypeScore=74.9404;InbreedingCoeff=0.9907;MQ=90.80;MQ0=0;MQRankSum=-2.277;QD=32.76;ReadPosRankSum=0.346;VQSLOD=3.3651;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,135,2066	0/0:9,0:9:27.08:0,27,409	0/0:35,0:35:99:0,99,1574	0/0:27,0:27:78.26:0,78,1186	0/0:38,0:38:99:0,111,1771	0/0:36,0:36:99:0,108,1700	0/0:25,0:25:75.26:0,75,1199	0/0:38,0:38:99:0,114,1782	0/0:27,0:27:81.26:0,81,1270	0/0:27,0:27:81.26:0,81,1254	0/0:18,0:18:54.18:0,54,863	0/0:35,0:35:99:0,105,1676	0/0:30,0:30:87.30:0,87,1390	0/0:30,0:30:90.31:0,90,1439	0/0:43,0:43:99:0,126,1962	0/0:32,0:32:96.31:0,96,1512	1/1:0,17:17:45.15:629,45,0	1/1:0,5:5:15.05:210,15,0	0/0:20,0:20:60.17:0,60,914	0/0:31,0:31:93.30:0,93,1462	0/0:41,0:41:99:0,120,1848	0/0:27,0:27:75.24:0,75,1174	0/0:23,0:23:69.24:0,69,1101	0/0:28,0:28:84.24:0,84,1309	0/0:25,0:25:75.26:0,75,1199	0/0:34,0:34:99:0,102,1619	0/0:31,0:31:93.30:0,93,1461	0/0:9,0:9:27.09:0,27,431
chr10	28364448	.	TA	T	1030.10	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.436;DP=706;FS=2.269;HRun=4;HaplotypeScore=64.9949;InbreedingCoeff=0.9916;MQ=87.39;MQ0=0;MQRankSum=-5.739;QD=32.19;ReadPosRankSum=1.100;VQSLOD=4.2583;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:66.21:0,66,900	0/0:13,0:13:39.10:0,39,521	0/0:25,0:25:66.21:0,66,887	0/0:24,0:24:57.15:0,57,725	0/0:38,0:38:99:0,111,1533	0/0:24,0:24:72.21:0,72,973	0/0:18,0:18:54.18:0,54,746	0/0:21,0:20:54.17:0,54,728	0/0:22,0:22:66.22:0,66,918	0/0:34,0:34:99:0,102,1414	0/0:24,0:24:69.19:0,69,929	0/0:26,0:26:78.23:0,78,1045	0/0:23,0:23:60.19:0,60,817	0/0:28,0:28:84.28:0,84,1171	0/0:21,0:21:63.20:0,63,867	0/0:21,0:21:60.20:0,60,837	1/1:0,22:22:66.20:792,66,0	1/1:0,10:10:30.09:360,30,0	0/0:26,0:26:78.25:0,78,1072	0/0:35,0:35:93.30:0,93,1287	0/0:27,0:27:78.23:0,78,1057	0/0:36,0:36:99:0,105,1450	0/0:29,0:29:81.26:0,81,1113	0/0:28,0:28:84.27:0,84,1156	0/0:30,0:30:87.28:0,87,1198	0/0:35,0:35:96.31:0,96,1316	0/0:37,0:35:99:0,111,1499	0/0:5,0:5:15.05:0,15,210
chr10	28364529	.	C	CA	738.19	PASS	AB=0.857;AC=5;AF=0.089;AN=56;BaseQRankSum=-2.940;DP=722;FS=3.424;HRun=8;HaplotypeScore=68.4976;InbreedingCoeff=0.7761;MQ=72.44;MQ0=0;MQRankSum=-0.758;QD=19.43;ReadPosRankSum=-0.495;VQSLOD=3.4274;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:75.03:0,75,686	0/0:16,0:16:42.02:0,42,384	0/0:13,0:13:23.24:0,23,177	0/0:13,0:10:23.94:0,24,199	0/0:37,0:37:93.03:0,93,846	0/0:31,0:31:84.03:0,84,764	0/0:25,0:25:63.03:0,63,576	0/0:23,0:23:63:0,63,564	0/0:22,0:22:60.01:0,60,544	0/0:27,1:29:42.46:0,42,630	0/0:36,0:37:99:0,107,958	0/0:24,0:24:66.02:0,66,600	0/0:39,0:39:99:0,107,967	0/0:23,1:24:34.41:0,34,565	0/0:33,0:33:96.01:0,96,865	0/0:23,0:23:66.03:0,66,604	1/1:8,11:19:17.59:431,18,0	1/1:0,13:13:36.11:415,36,0	0/0:19,0:19:50.99:0,51,461	0/0:40,0:40:99:0,111,1011	0/0:16,0:16:39.02:0,39,357	0/0:30,0:30:78.03:0,78,714	0/0:34,0:35:86.07:0,86,775	0/0:28,0:28:77.98:0,78,701	0/0:27,0:27:75.04:0,75,686	0/0:31,0:31:84.04:0,84,769	0/0:41,0:40:99:0,117,1062	0/1:5,1:6:19.61:20,0,95
chr10	28364640	.	AT	A	1346.35	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.509;DP=752;FS=0.000;HRun=1;HaplotypeScore=74.0319;InbreedingCoeff=0.9995;MQ=83.23;MQ0=0;MQRankSum=-3.603;QD=36.39;ReadPosRankSum=3.071;VQSLOD=4.0794;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,123,1938	0/0:10,0:10:30.10:0,30,480	0/0:24,0:24:69.22:0,69,1060	0/0:20,0:20:60.16:0,60,931	0/0:30,0:30:90.31:0,90,1433	0/0:26,0:26:78.24:0,78,1200	0/0:27,0:27:81.26:0,81,1266	0/0:30,0:30:90.31:0,90,1438	0/0:25,0:25:75.24:0,75,1175	0/0:28,0:28:84.25:0,84,1311	0/0:16,0:16:48.16:0,48,767	0/0:30,0:30:84.27:0,84,1317	0/0:25,0:25:75.26:0,75,1196	0/0:27,0:27:81.28:0,81,1292	0/0:24,0:24:72.25:0,72,1150	0/0:29,0:29:87.30:0,87,1391	1/1:0,18:18:51.17:713,51,0	1/1:0,19:19:54.18:755,54,0	0/0:34,0:34:99:0,102,1574	0/0:42,0:42:99:0,126,2014	0/0:18,0:18:54.18:0,54,863	0/0:31,0:31:93.32:0,93,1486	0/0:27,0:27:78.27:0,78,1247	0/0:26,0:26:78.18:0,78,1191	0/0:29,0:29:87.26:0,87,1343	0/0:41,0:41:99:0,123,1945	0/0:45,0:45:99:0,135,2109	0/0:10,0:10:30.10:0,30,480
chr10	28368208	.	A	AT	839.58	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-6.653;DP=660;FS=0.676;HRun=9;HaplotypeScore=64.7020;InbreedingCoeff=0.9962;MQ=80.72;MQ0=0;MQRankSum=-2.505;QD=21.53;ReadPosRankSum=0.779;VQSLOD=4.4115;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:80.94:0,81,693	0/0:17,0:17:47.98:0,48,417	0/0:25,0:25:42.85:0,43,370	0/0:13,0:13:23:0,23,186	0/0:29,0:29:71.98:0,72,625	0/0:17,0:17:47.99:0,48,417	0/0:19,0:19:56.99:0,57,495	0/0:25,0:25:56.95:0,57,492	0/0:25,0:25:68.98:0,69,599	0/0:30,0:30:83.98:0,84,729	0/0:17,0:17:50.99:0,51,443	0/0:23,0:23:62.94:0,63,540	0/0:21,0:21:56.97:0,57,490	0/0:27,0:27:71.97:0,72,625	0/0:23,0:23:56.98:0,57,495	0/0:22,0:22:65.99:0,66,573	1/1:4,19:23:54.15:596,54,0	1/1:2,14:16:33.09:365,33,0	0/0:27,0:27:56.95:0,57,489	0/0:38,0:38:99:0,102,882	0/0:18,0:18:47.99:0,48,417	0/0:30,0:30:86.98:0,87,755	0/0:21,1:22:20.80:0,21,410	0/0:22,0:22:62.99:0,63,547	0/0:23,0:23:65.97:0,66,569	0/0:30,0:30:57.92:0,58,677	0/0:39,0:39:99:0,108,934	0/0:12,0:12:32.98:0,33,286
chr10	28371588	.	G	GAGAC	4941.15	PASS	AB=1.000;AC=29;AF=0.580;AN=50;BaseQRankSum=2.064;DP=733;FS=7.250;HRun=0;HaplotypeScore=109.1257;InbreedingCoeff=0.3578;MQ=49.76;MQ0=52;MQRankSum=0.440;QD=11.05;ReadPosRankSum=2.998;VQSLOD=3.6960;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	1/1:12,0:12:5.93:282,6,0	0/0:41,0:8:24:0,24,293	0/0:74,0:11:15.18:0,15,156	./.	0/1:24,0:22:11.99:12,0,18	0/1:18,0:16:11.92:44,0,12	1/1:38,0:35:57.52:683,58,0	1/1:29,0:27:35.92:537,36,0	1/1:7,24:32:65.24:794,65,0	1/1:15,0:15:24.90:288,25,0	0/0:22,0:21:3.18:0,3,14	1/1:29,0:29:8:61,8,0	0/1:32,0:31:0.16:297,0,0	1/1:24,0:24:1.95:216,2,0	1/1:27,0:22:27.10:365,27,0	0/0:22,0:19:27.05:0,27,349	0/0:9,0:7:8.37:0,8,72	1/1:26,0:24:37.18:398,37,0	0/1:23,0:22:13.02:45,0,13	1/1:21,0:16:17.80:190,18,0	0/0:25,0:23:2.79:0,3,25	0/0:16,0:15:3:0,3,25	1/1:14,0:14:14.46:176,14,0	./.	0/1:30,0:28:5.28:462,0,5	0/1:38,0:38:13.60:87,0,14	0/1:14,0:12:4.18:4,0,14
chr10	28371594	.	G	GACAC	9208.71	PASS	AB=0.566;AC=34;AF=0.630;AN=54;BaseQRankSum=-4.627;DP=741;FS=8.764;HRun=0;HaplotypeScore=96.2864;InbreedingCoeff=0.4095;MQ=48.17;MQ0=59;MQRankSum=3.040;QD=17.44;ReadPosRankSum=4.580;VQSLOD=3.8891;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:8,26:31:0:0,0,0	1/1:11,0:11:27.09:509,27,0	0/0:44,0:8:15.05:0,15,225	0/0:79,0:13:22.75:0,23,195	0/1:4,21:26:0:0,0,0	0/1:7,19:24:18.58:29,0,19	0/1:4,13:18:27.24:61,0,27	1/1:37,0:33:87.25:1344,87,0	1/1:25,1:24:51.02:960,51,0	1/1:31,1:31:80.81:1352,81,0	1/1:14,0:14:27.07:502,27,0	0/0:9,17:24:4.30:0,4,65	0/1:10,0:29:6.46:66,0,6	1/1:28,0:27:50.03:738,50,0	1/1:24,0:23:24.08:426,24,0	1/1:25,0:19:21.35:621,21,0	0/0:20,0:17:19.35:0,19,214	0/0:8,0:6:4.85:0,5,26	1/1:24,0:22:24.86:757,25,0	1/1:3,21:24:6.02:91,6,0	1/1:23,0:17:20.81:347,21,0	0/1:5,18:22:0:0,0,0	./.	1/1:14,0:14:18.04:318,18,0	0/0:4,16:19:1.55:0,2,4	0/1:10,21:30:20.45:934,0,20	0/1:6,33:39:25.01:125,0,25	1/1:6,0:10:2.91:29,3,0
chr10	28371622	.	GAGAC	G	1366.93	PASS	AB=0.988;AC=29;AF=0.558;AN=52;BaseQRankSum=0.970;DP=668;FS=13.614;HRun=0;HaplotypeScore=114.1297;InbreedingCoeff=-0.3809;MQ=41.76;MQ0=56;MQRankSum=5.824;QD=2.45;ReadPosRankSum=-2.321;VQSLOD=1.1101;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:25:6.46:27,0,6	0/1:6,2:8:5.97:71,0,6	./.	0/0:30,0:5:3.06:0,3,21	1/1:25,0:25:2.44:23,2,0	0/1:25,0:21:32.19:32,0,57	0/1:26,0:19:37.42:37,0,48	0/1:29,0:28:97.42:97,0,155	1/1:19,1:17:18.98:108,19,0	0/1:34,0:32:42.39:42,0,380	1/1:12,6:16:4.66:13,5,0	0/1:28,0:26:15.96:125,0,16	0/1:30,0:29:13.77:94,0,14	0/1:25,0:24:5.54:6,0,33	0/0:15,14:27:11.03:0,11,93	0/1:27,0:22:61.13:82,0,61	0/1:26,0:22:6.34:138,0,6	0/1:14,0:12:20.04:70,0,20	0/0:25,1:23:3.16:0,3,307	0/1:21,0:20:12.95:13,0,13	0/1:25,0:19:27.48:99,0,27	1/1:26,0:24:8.70:64,9,0	./.	1/1:11,8:18:3.85:11,4,0	1/1:22,0:20:8.25:63,8,0	0/1:38,0:35:99:238,0,245	0/1:27,0:26:9.34:50,0,9	0/1:16,0:13:10.88:11,0,72
chr10	28371624	.	GAC	G	1618.11	PASS	AB=0.960;AC=33;AF=0.635;AN=52;BaseQRankSum=1.338;DP=670;FS=35.390;HRun=0;HaplotypeScore=104.3835;InbreedingCoeff=-0.2850;MQ=41.70;MQ0=55;MQRankSum=7.188;QD=2.75;ReadPosRankSum=-1.552;VQSLOD=0.6138;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:31,0:26:9.78:50,10,0	0/1:8,0:8:5.97:71,0,6	./.	0/0:28,0:4:2.85:0,3,21	1/1:24,0:24:2.59:24,3,0	0/1:24,0:20:36.68:41,0,37	0/1:26,0:19:39.52:40,0,47	0/1:20,9:28:94.79:95,0,161	1/1:21,0:18:19.38:108,19,0	0/1:34,0:32:93.49:93,0,244	1/1:18,0:16:4.66:13,5,0	1/1:28,0:26:2.25:128,2,0	0/1:31,0:30:3.24:103,0,3	0/1:13,12:24:5.54:6,0,33	0/0:29,0:27:6.03:0,6,52	0/1:27,0:23:5.86:131,0,6	0/1:25,0:21:15.02:134,0,15	0/1:15,0:13:10.16:80,0,10	0/1:26,0:22:9.66:10,0,169	0/1:22,0:21:6.31:33,0,6	1/1:25,0:19:4.04:103,4,0	1/1:27,0:25:11.18:72,11,0	./.	1/1:19,0:18:3.85:11,4,0	1/1:23,0:21:11.87:83,12,0	0/1:37,0:34:99:249,0,174	0/1:27,1:27:6.37:75,0,6	0/1:16,0:13:10.51:11,0,51
chr10	28371949	.	G	GA	5742.74	PASS	AB=0.623;AC=39;AF=0.696;AN=56;BaseQRankSum=-6.547;DP=675;FS=3.373;HRun=13;HaplotypeScore=88.9535;InbreedingCoeff=0.2821;MQ=70.17;MQ0=0;MQRankSum=0.518;QD=9.95;ReadPosRankSum=-2.322;VQSLOD=3.9114;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:19,18:38:16.56:466,17,0	0/1:6,6:12:8.56:72,0,9	0/0:17,0:17:3.12:0,3,70	0/0:12,0:13:5.63:0,6,43	0/1:19,15:35:62.82:137,0,63	1/1:8,17:25:10.39:232,10,0	1/1:8,17:25:22.35:344,22,0	0/1:14,23:37:3.82:519,0,4	1/1:6,17:24:46.13:407,46,0	1/1:13,11:24:3.40:160,3,0	0/1:8,17:28:4.71:194,0,5	1/1:16,17:34:12.29:245,12,0	0/1:10,17:28:24.01:108,0,24	0/1:7,20:27:11.74:168,0,12	0/0:34,1:38:16.30:0,16,354	1/1:6,20:28:29.04:287,29,0	0/0:2,0:21:38.68:0,39,112	0/0:2,0:7:8.13:0,8,23	1/1:3,11:14:12.43:250,12,0	1/1:9,11:20:15.02:139,15,0	1/1:8,19:27:0.72:280,1,0	1/1:5,15:23:28.35:266,28,0	1/1:3,9:14:14.88:126,15,0	1/1:3,10:15:3.12:148,3,0	1/1:5,10:16:16.90:268,17,0	1/1:12,27:40:7.08:456,7,0	0/1:10,17:28:35.04:248,0,35	1/1:1,13:14:24.03:223,24,0
chr10	28372246	.	T	TACAC	2455.83	PASS	AB=0.868;AC=44;AF=0.880;AN=50;BaseQRankSum=-3.194;DP=601;FS=6.158;HRun=0;HaplotypeScore=120.6236;InbreedingCoeff=0.2590;MQ=72.51;MQ0=10;MQRankSum=2.239;QD=5.05;ReadPosRankSum=-1.508;VQSLOD=1.8844;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:22:9:108,9,0	1/1:6,0:5:6.02:137,6,0	./.	./.	1/1:16,0:16:8.77:88,9,0	1/1:24,0:24:17.77:316,18,0	1/1:19,4:24:3.01:70,3,0	1/1:29,0:28:1.82:5,2,0	1/1:20,0:20:2.96:19,3,0	0/1:15,0:14:0.47:58,0,0	1/1:10,0:14:2.94:18,3,0	1/1:15,0:24:2.63:12,3,0	1/1:15,8:24:3.01:70,3,0	1/1:20,0:20:18.48:252,18,0	1/1:22,0:22:20.84:373,21,0	1/1:13,6:20:5.80:140,6,0	0/0:21,0:29:12:0,12,108	0/0:13,0:13:2.99:0,3,24	1/1:15,0:14:7.83:82,8,0	1/1:14,0:14:2.77:25,3,0	1/1:34,0:33:15.03:212,15,0	1/1:18,0:18:12.01:167,12,0	1/1:12,0:12:2.99:24,3,0	0/1:32,14:50:6.76:7,0,40	1/1:16,3:20:3.01:70,3,0	1/1:20,0:18:20.73:246,21,0	1/1:23,0:23:5.98:72,6,0	./.
chr10	28373876	.	AATAAT	A	149.07	PASS	AB=0.934;AC=8;AF=0.143;AN=56;BaseQRankSum=8.607;DP=214;FS=4.290;HRun=0;HaplotypeScore=60.5893;InbreedingCoeff=0.0362;MQ=76.13;MQ0=0;MQRankSum=-0.991;QD=2.22;ReadPosRankSum=3.865;VQSLOD=0.4298;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:6:7.02:0,7,234	0/1:3,0:3:6.58:14,0,7	0/0:6,0:6:16.87:0,17,200	0/1:5,0:4:6.82:7,0,53	0/0:5,0:5:14.56:0,15,129	0/0:7,0:7:20.56:0,21,265	0/0:1,0:1:2.84:0,3,14	0/0:26,0:25:56.71:0,57,339	0/0:5,0:5:14.61:0,15,132	0/0:3,0:3:8.61:0,9,99	0/0:7,0:7:20.22:0,20,189	0/0:5,0:5:14.71:0,15,248	0/0:4,0:4:11.54:0,12,64	0/0:9,0:9:26.11:0,26,285	0/1:5,0:5:11.88:12,0,16	0/0:5,0:5:14.54:0,15,137	0/1:12,2:14:50.19:50,0,148	0/1:5,3:8:67.02:91,0,67	0/0:11,0:11:20.17:0,20,241	0/0:10,0:10:29.14:0,29,265	0/0:4,0:4:11.91:0,12,219	0/0:4,0:4:11.57:0,12,111	0/0:7,0:7:20.13:0,20,104	0/0:2,0:2:4.69:0,5,20	0/0:14,0:14:41.45:0,41,627	0/0:6,0:6:14.20:0,14,69	0/1:13,0:13:5.73:6,0,93	1/1:19,0:19:1.26:92,1,0
chr10	28373877	.	AT	A	330.07	PASS	AB=0.750;AC=6;AF=0.107;AN=56;BaseQRankSum=5.415;DP=218;FS=0.000;HRun=1;HaplotypeScore=43.2316;InbreedingCoeff=0.0346;MQ=75.91;MQ0=0;MQRankSum=-1.720;QD=6.47;ReadPosRankSum=2.395;VQSLOD=0.6505;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:5,1:6:2.86:3,0,167	0/1:1,2:3:10.01:33,0,10	0/0:6,0:6:17.89:0,18,221	0/0:4,0:4:8.90:0,9,81	0/0:6,0:6:17.80:0,18,143	0/0:7,0:7:20.87:0,21,220	0/0:1,0:1:2.94:0,3,18	0/0:26,1:26:38.87:0,39,347	0/0:5,0:5:14.87:0,15,129	0/0:3,0:3:8.86:0,9,81	0/0:7,0:7:20.73:0,21,168	0/0:5,0:5:14.91:0,15,179	0/0:5,0:5:14.80:0,15,99	0/0:10,0:10:29.64:0,30,270	0/1:2,2:4:23.06:32,0,23	0/0:5,0:5:14.78:0,15,120	0/0:14,0:14:32.75:0,33,259	0/0:8,0:8:17.05:0,17,125	0/0:11,1:12:10.72:0,11,221	0/0:11,0:11:32.64:0,33,290	0/0:4,0:4:11.99:0,12,163	0/0:4,0:4:11.85:0,12,103	0/0:7,0:7:20.68:0,21,132	0/0:2,0:2:5.88:0,6,36	0/0:14,0:14:41.80:0,42,504	0/1:6,0:6:10.14:10,0,71	0/1:9,4:13:44.73:45,0,133	0/1:7,12:19:0.25:323,0,0
chr10	28373879	.	AAT	A	351.70	PASS	AB=0.825;AC=8;AF=0.143;AN=56;BaseQRankSum=7.044;DP=227;FS=2.923;HRun=0;HaplotypeScore=49.3536;InbreedingCoeff=0.1042;MQ=78.90;MQ0=0;MQRankSum=-1.940;QD=5.86;ReadPosRankSum=1.544;VQSLOD=2.1217;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:5,1:6:6.92:7,0,110	0/1:1,2:3:5.92:41,0,6	0/0:6,0:6:16.87:0,17,200	0/1:6,0:6:0.80:1,0,122	0/0:6,0:6:17.40:0,17,105	0/0:7,0:7:20.54:0,21,148	0/0:1,0:1:2.84:0,3,14	0/0:28,1:28:24.72:0,25,249	0/0:6,0:6:13.45:0,13,91	0/0:3,0:3:8.61:0,9,76	0/0:7,0:7:17.08:0,17,101	0/0:5,0:5:14.70:0,15,131	0/0:5,0:5:14.41:0,14,79	0/0:10,0:10:28.93:0,29,183	0/1:3,2:5:15.90:40,0,16	0/0:6,0:6:13.22:0,13,81	0/0:14,0:14:3.23:0,3,180	0/1:8,0:8:23.36:23,0,68	0/0:12,1:13:6.47:0,6,150	0/0:11,0:11:28.98:0,29,176	0/0:4,0:4:11.89:0,12,102	0/0:4,0:4:11.56:0,12,72	0/0:7,0:7:20.13:0,20,104	0/0:3,0:3:4.58:0,5,20	0/0:14,0:14:35.17:0,35,270	0/0:6,0:6:14.20:0,14,69	0/1:10,4:14:60.96:61,0,92	1/1:6,12:18:9.04:305,9,0
chr10	28374440	.	A	AG	24606.85	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-8.817;DP=689;FS=30.998;HRun=0;HaplotypeScore=58.1454;InbreedingCoeff=0.9984;MQ=81.15;MQ0=0;MQRankSum=-11.179;QD=38.27;ReadPosRankSum=6.744;VQSLOD=2.6534;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,40:41:99:1491,102,0	1/1:0,10:10:30.10:439,30,0	0/0:22,0:22:66.15:0,66,875	0/0:24,0:24:66.69:0,67,896	1/1:0,22:22:66.15:939,66,0	1/1:1,30:31:84.28:1228,84,0	1/1:0,19:19:42.14:615,42,0	1/1:1,43:45:99:1821,132,0	1/1:0,20:20:57.19:833,57,0	1/1:1,26:27:78.18:1081,78,0	1/1:1,14:15:36.03:498,36,0	1/1:0,23:23:54.18:790,54,0	1/1:0,22:22:51.17:746,51,0	1/1:1,29:30:78.26:1132,78,0	1/1:0,28:28:81.27:1185,81,0	1/1:0,23:23:60.20:876,60,0	1/1:0,26:26:69.16:983,69,0	1/1:0,14:14:36.12:526,36,0	1/1:1,25:26:75.24:1080,75,0	1/1:0,31:31:90.24:1291,90,0	1/1:1,25:26:60.20:878,60,0	1/1:0,24:24:69.06:955,69,0	1/1:0,21:21:54.18:781,54,0	1/1:1,17:18:36.12:526,36,0	1/1:0,32:32:93.31:1361,93,0	1/1:0,26:26:78.11:1053,78,0	1/1:1,29:31:81.22:1150,81,0	1/1:1,11:12:23.97:350,24,0
chr10	28375501	.	A	AACACAC	7565.86	PASS	AC=52;AF=1.000;AN=52;BaseQRankSum=-2.605;DP=664;FS=0.000;HRun=0;HaplotypeScore=138.4392;InbreedingCoeff=-0.0447;MQ=57.11;MQ0=19;MQRankSum=-1.829;QD=13.30;ReadPosRankSum=0.156;VQSLOD=3.9217;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:18,3:36:15.05:309,15,0	1/1:6,4:12:9.03:232,9,0	./.	./.	1/1:16,0:17:21.05:316,21,0	1/1:13,7:26:12.04:271,12,0	1/1:12,6:22:11.90:324,12,0	1/1:26,0:26:27.07:483,27,0	1/1:9,6:19:12.04:271,12,0	1/1:10,2:18:14.18:253,14,0	1/1:11,4:21:6:77,6,0	1/1:19,0:22:21.07:404,21,0	1/1:7,1:19:8.12:211,8,0	1/1:10,8:27:9.86:360,10,0	1/1:7,6:19:15.04:414,15,0	1/1:18,8:27:12.93:390,13,0	1/1:10,0:16:12.03:152,12,0	1/1:12,0:17:9.03:230,9,0	1/1:10,4:15:6.87:253,7,0	1/1:12,11:27:15.05:368,15,0	1/1:29,0:31:17.27:246,17,0	1/1:14,4:22:12.04:272,12,0	1/1:8,0:12:3.01:40,3,0	1/1:8,7:17:3.01:39,3,0	1/1:12,10:30:22.48:539,22,0	1/1:10,3:23:42.12:680,42,0	1/1:21,5:31:15.04:296,15,0	1/1:5,2:11:6.02:135,6,0
chr10	28376342	.	T	TTAA	1097.55	PASS	AB=0.635;AC=21;AF=0.375;AN=56;BaseQRankSum=10.431;DP=558;FS=36.998;HRun=0;HaplotypeScore=127.2417;InbreedingCoeff=-0.4675;MQ=76.61;MQ0=2;MQRankSum=-3.262;QD=2.83;ReadPosRankSum=-0.292;VQSLOD=1.0188;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:35:14.97:0,15,192	0/1:3,0:8:7.73:59,0,8	0/1:28,0:25:0.95:1,0,346	0/0:16,0:14:21.87:0,22,289	0/1:8,0:16:56.33:131,0,56	0/1:13,0:20:44.64:45,0,168	0/1:2,0:13:23.08:85,0,23	0/1:7,0:30:87.28:87,0,133	0/0:7,0:15:13.04:0,13,162	0/1:21,0:28:69.53:70,0,250	0/1:5,1:17:59.59:60,0,115	0/1:6,0:22:30.21:30,0,90	0/1:5,0:19:25.56:32,0,26	0/0:6,0:21:13.75:0,14,134	0/1:5,0:26:92.06:99,0,92	0/1:9,0:24:27.69:28,0,125	0/0:7,0:34:96.13:0,96,1141	0/0:2,0:16:45.13:0,45,562	0/1:8,0:18:99:142,0,136	0/1:3,0:15:36.07:55,0,36	0/1:4,0:16:29.28:44,0,29	0/1:6,0:23:70.35:70,0,145	0/1:7,0:12:18.69:19,0,52	0/0:4,0:19:9.41:0,9,105	0/0:5,0:13:12.75:0,13,124	0/1:12,0:33:99:185,0,144	0/1:4,0:16:10.80:11,0,80	1/1:3,0:3:1.36:3,1,0
chr10	28377476	.	AAC	A	707.09	PASS	AB=0.974;AC=4;AF=0.071;AN=56;BaseQRankSum=7.440;DP=697;FS=11.062;HRun=0;HaplotypeScore=129.3161;InbreedingCoeff=0.5029;MQ=66.25;MQ0=8;MQRankSum=-0.997;QD=8.52;ReadPosRankSum=0.586;VQSLOD=2.4233;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,126,1371	0/0:11,0:11:29.69:0,30,316	0/1:26,0:15:5.38:5,0,107	0/0:21,0:14:19.11:0,19,176	0/0:32,0:31:90.93:0,91,1017	0/0:23,0:23:64.83:0,65,697	0/0:26,0:26:77.96:0,78,884	0/0:36,0:36:84.68:0,85,946	0/0:16,0:16:46.20:0,46,486	0/0:26,0:25:74.57:0,75,785	0/0:23,0:23:68.90:0,69,717	0/0:20,0:20:59.96:0,60,631	0/0:30,0:30:89.94:0,90,943	0/0:22,0:22:65.98:0,66,720	0/0:29,0:29:80.48:0,80,895	0/0:25,0:25:71.55:0,72,759	1/1:34,4:38:72.03:708,72,0	0/1:17,1:18:16.22:104,0,16	0/0:18,0:15:41.85:0,42,447	0/0:32,0:32:92.68:0,93,1010	0/0:18,0:17:51.04:0,51,557	0/0:15,0:15:45:0,45,477	0/0:19,0:19:43.54:0,44,528	0/0:34,0:33:95.87:0,96,1003	0/0:20,0:20:59.82:0,60,647	0/0:37,0:37:99:0,111,1187	0/0:21,0:21:63.04:0,63,695	0/0:15,0:15:29.07:0,29,394
chr10	28377477	.	AC	A	949.67	PASS	AB=0.748;AC=4;AF=0.071;AN=56;BaseQRankSum=3.918;DP=695;FS=11.923;HRun=1;HaplotypeScore=114.3561;InbreedingCoeff=0.4986;MQ=66.66;MQ0=8;MQRankSum=-1.718;QD=11.87;ReadPosRankSum=0.915;VQSLOD=1.0601;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,126,1127	0/0:10,0:10:30.01:0,30,276	0/1:25,1:15:17.69:18,0,121	0/0:22,0:14:14.37:0,14,138	0/0:33,0:32:90.88:0,91,853	0/0:23,0:23:60.04:0,60,583	0/0:26,0:26:76.63:0,77,720	0/0:36,0:36:87.64:0,88,862	0/0:16,0:16:42.98:0,43,409	0/0:27,0:26:77.56:0,78,723	0/0:23,0:23:68.91:0,69,621	0/0:21,0:21:62.37:0,62,558	0/0:31,0:31:92.79:0,93,832	0/0:22,0:22:65.96:0,66,606	0/0:28,0:28:80.92:0,81,756	0/0:24,0:24:70.61:0,71,658	1/1:4,34:38:72.15:915,72,0	0/1:2,14:16:9.32:132,0,9	0/0:17,0:14:42.03:0,42,400	0/0:32,0:32:92.63:0,93,863	0/0:19,0:18:50.88:0,51,469	0/0:15,0:15:45.01:0,45,415	0/0:18,0:18:43.81:0,44,456	0/0:34,0:33:95.73:0,96,876	0/0:20,0:20:58.29:0,58,542	0/0:38,0:38:99:0,114,1064	0/0:21,0:21:63.02:0,63,596	0/0:15,0:15:29.08:0,29,336
chr10	28379207	.	TCA	T	1202.17	PASS	AB=0.895;AC=30;AF=0.556;AN=54;BaseQRankSum=7.377;DP=687;FS=11.925;HRun=0;HaplotypeScore=88.1186;InbreedingCoeff=0.0761;MQ=66.69;MQ0=13;MQRankSum=-0.773;QD=2.35;ReadPosRankSum=2.428;VQSLOD=0.5174;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:38,3:41:29.62:30,0,360	1/1:8,0:9:2.84:14,3,0	./.	0/1:58,0:34:0:0,0,0	0/1:18,1:19:8.81:9,0,259	0/0:12,0:11:6:0,6,67	0/1:28,4:32:39.09:39,0,264	1/1:21,0:21:2.99:25,3,0	0/1:29,0:30:16.91:17,0,306	0/0:20,0:20:23.99:0,24,293	0/1:16,0:15:0.30:0,0,268	0/1:26,1:29:16.91:17,0,306	0/1:16,10:26:20.92:206,0,21	1/1:14,8:25:20.55:192,21,0	0/1:29,3:32:8.77:9,0,288	0/0:15,0:15:15.03:0,15,203	1/1:12,0:24:11.36:56,11,0	1/1:13,0:17:5.68:28,6,0	0/1:15,1:16:24.25:24,0,24	0/0:15,0:15:6.17:0,6,108	0/0:43,0:43:39.07:0,39,497	0/0:19,0:19:18.06:0,18,266	1/1:9,3:12:6.01:66,6,0	0/1:21,13:34:10.01:295,0,10	0/1:11,4:15:47.64:48,0,161	1/1:19,2:20:6.01:66,6,0	1/1:20,5:25:12.03:131,12,0	1/1:5,4:9:9.02:99,9,0
chr10	28379706	.	GT	G	556.20	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.340;DP=573;FS=0.000;HRun=6;HaplotypeScore=60.3536;InbreedingCoeff=0.9963;MQ=86.61;MQ0=0;MQRankSum=-3.287;QD=18.54;ReadPosRankSum=1.377;VQSLOD=3.1849;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:54.17:0,54,697	0/0:11,0:11:30.10:0,30,395	0/0:18,0:18:27.62:0,28,531	0/0:23,0:23:39.50:0,40,699	0/0:24,0:24:69.22:0,69,908	0/0:13,0:13:36.10:0,36,459	0/0:26,0:26:72.23:0,72,947	0/0:40,0:40:99:0,111,1424	0/0:22,0:22:63.18:0,63,800	0/0:19,0:19:57.18:0,57,738	0/0:12,0:12:33.09:0,33,409	0/0:14,0:14:39.13:0,39,513	0/0:24,0:24:63.20:0,63,825	0/0:25,0:25:72.23:0,72,947	0/0:20,0:20:60.20:0,60,789	0/0:28,0:28:78.25:0,78,1026	1/1:2,17:19:42.11:451,42,0	1/1:2,9:11:21.05:226,21,0	0/0:20,0:20:54.17:0,54,697	0/0:22,0:22:59.92:0,60,774	0/0:19,0:19:48.16:0,48,632	0/0:19,0:19:51.11:0,51,635	0/0:26,0:26:69.18:0,69,880	0/0:16,0:16:36.12:0,36,474	0/0:23,0:23:66.16:0,66,848	0/0:24,0:24:63.20:0,63,828	0/0:25,0:25:63.19:0,63,806	0/0:9,0:9:27.09:0,27,355
chr10	28379996	.	TAC	T	2102.50	PASS	AB=0.835;AC=41;AF=0.788;AN=52;BaseQRankSum=1.772;DP=482;FS=9.282;HRun=0;HaplotypeScore=76.4700;InbreedingCoeff=-0.0110;MQ=72.68;MQ0=5;MQRankSum=1.999;QD=5.48;ReadPosRankSum=0.279;VQSLOD=1.9572;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:31,4:36:14.70:125,15,0	1/1:4,2:7:11.70:93,12,0	./.	0/0:35,0:23:0:0,0,0	1/1:18,2:21:5.85:47,6,0	1/1:12,6:18:14.87:144,15,0	1/1:12,3:17:15.17:125,15,0	./.	1/1:11,4:16:19.97:176,20,0	1/1:12,0:12:6.02:64,6,0	1/1:9,2:11:14.81:131,15,0	0/1:9,4:17:64.08:64,0,71	0/1:10,1:11:42.47:53,0,42	1/1:11,1:15:15.04:158,15,0	1/1:9,4:14:14.83:142,15,0	1/1:11,2:16:14.87:143,15,0	0/1:19,2:19:11.53:12,0,189	0/1:15,1:16:15.29:15,0,98	1/1:13,1:14:3.01:33,3,0	1/1:9,3:12:8.86:79,9,0	0/1:31,5:35:20.65:184,0,21	0/1:7,1:10:8.13:8,0,28	1/1:7,2:9:6.02:65,6,0	1/1:13,7:22:20.72:190,21,0	0/1:10,4:15:13.79:67,0,14	0/0:12,0:12:2.99:0,3,24	1/1:8,1:10:8.51:58,9,0	1/1:3,4:7:6.02:65,6,0
chr10	28380508	.	T	TA	5103.52	PASS	AB=0.657;AC=34;AF=0.607;AN=56;BaseQRankSum=-4.839;DP=674;FS=9.031;HRun=15;HaplotypeScore=79.4908;InbreedingCoeff=-0.4421;MQ=71.11;MQ0=2;MQRankSum=0.446;QD=7.82;ReadPosRankSum=0.949;VQSLOD=3.5378;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:12,21:34:50.88:152,0,51	0/1:5,5:10:10.24:105,0,10	0/1:27,0:13:3:3,0,26	0/0:21,0:18:3.98:0,4,46	1/1:14,21:37:41.36:404,41,0	0/1:15,14:30:73.05:127,0,73	0/1:8,9:17:24.07:147,0,24	0/1:14,19:34:12.47:296,0,12	1/1:4,12:18:35.65:280,36,0	0/1:11,13:25:18.29:168,0,18	1/1:4,17:22:34.98:298,35,0	0/1:7,13:21:15.89:125,0,16	0/1:13,10:23:32.10:81,0,32	1/1:7,13:20:2.92:127,3,0	0/1:8,16:24:2.27:149,0,2	0/1:6,13:20:31.97:177,0,32	1/1:11,19:31:17.57:338,18,0	0/1:11,13:24:39.26:241,0,39	0/1:11,10:22:37.40:185,0,37	0/1:15,19:35:52.65:246,0,53	0/1:7,9:17:3.86:106,0,4	0/1:13,15:28:29.04:182,0,29	0/1:10,4:22:3.51:156,0,4	1/1:5,14:21:41.44:319,41,0	0/1:4,10:15:33.21:69,0,33	0/1:17,17:33:20.13:239,0,20	1/1:12,18:31:27.02:322,27,0	0/1:4,7:11:6.02:64,0,6
chr10	28381531	.	TACACAC	T	65.10	PASS	AC=4;AF=0.080;AN=50;BaseQRankSum=2.675;DP=556;FS=0.000;HRun=0;HaplotypeScore=111.2178;InbreedingCoeff=0.4908;MQ=67.05;MQ0=10;MQRankSum=-2.942;QD=1.91;ReadPosRankSum=-0.475;VQSLOD=1.9890;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:24.08:0,24,642	0/0:8,0:8:6.02:0,6,97	./.	./.	0/0:12,0:12:3.01:0,3,65	0/0:23,0:23:21.05:0,21,491	0/0:31,0:31:24.08:0,24,600	0/0:21,0:21:2.04:0,2,6	0/0:14,0:14:12.04:0,12,283	0/0:22,0:21:26.54:0,27,448	0/0:11,0:11:3.01:0,3,96	0/0:14,0:14:12.04:0,12,343	0/0:13,0:13:12.04:0,12,304	0/0:19,0:19:12.04:0,12,333	0/0:18,0:18:14.89:0,15,290	0/0:14,0:14:14.71:0,15,334	1/1:15,3:19:3.01:60,3,0	1/1:12,3:15:6.02:100,6,0	0/0:12,0:11:6.01:0,6,69	0/0:14,0:12:9.03:0,9,230	0/0:32,0:32:24.05:0,24,474	0/0:21,0:18:18.06:0,18,484	0/0:23,0:20:15.05:0,15,396	0/0:40,0:40:33.11:0,33,755	0/0:15,0:15:6.02:0,6,192	0/0:22,0:22:33.58:0,34,764	0/0:13,0:12:21.05:0,21,497	./.
chr10	28386679	.	AGGGTATAC	A	923.43	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.769;DP=664;FS=1.079;HRun=0;HaplotypeScore=162.6847;InbreedingCoeff=0.9913;MQ=94.80;MQ0=0;MQRankSum=-6.139;QD=36.94;ReadPosRankSum=0.571;VQSLOD=3.2929;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:17:51.17:0,51,2088	0/0:18,0:18:51.16:0,51,1893	0/0:36,0:36:93.29:0,93,3320	0/0:24,0:24:69.18:0,69,2256	0/0:29,0:29:84.29:0,84,3421	0/0:28,0:28:84.26:0,84,3373	0/0:17,0:17:51.16:0,51,2017	0/0:39,0:39:99:0,114,4381	0/0:24,0:24:63.22:0,63,2702	0/0:31,0:31:87.30:0,87,3641	0/0:29,0:29:81.26:0,81,3214	0/0:26,0:26:78.27:0,78,3337	0/0:33,0:33:93.30:0,93,3893	0/0:27,0:27:78.23:0,78,3117	0/0:37,0:37:99:0,108,4327	0/0:16,0:16:48.15:0,48,1909	1/1:1,12:13:20.64:567,21,0	1/1:3,9:12:18.06:475,18,0	0/0:13,0:13:33.11:0,33,1416	0/0:20,0:20:60.18:0,60,2310	0/0:23,0:23:66.21:0,66,2787	0/0:19,0:19:57.20:0,57,2421	0/0:37,0:37:96.31:0,96,3858	0/0:18,0:18:51.16:0,51,2095	0/0:18,0:18:54.17:0,54,2185	0/0:27,0:27:81.27:0,81,3290	0/0:25,0:24:72.21:0,72,2935	0/0:7,0:7:21.07:0,21,919
chr10	28387277	.	G	GA	1164.03	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.338;DP=699;FS=0.622;HRun=1;HaplotypeScore=72.2582;InbreedingCoeff=0.9956;MQ=81.61;MQ0=0;MQRankSum=0.430;QD=26.46;ReadPosRankSum=2.619;VQSLOD=3.6074;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,163,2102	0/0:12,0:12:36.12:0,36,464	0/0:27,0:27:71.92:0,72,846	0/0:22,0:22:60.12:0,60,731	0/0:21,0:21:60.19:0,60,777	0/0:19,0:19:51.17:0,51,662	0/0:32,0:32:93.29:0,93,1190	0/0:25,0:25:66.21:0,66,855	0/0:29,0:29:81.25:0,81,1034	0/0:37,0:37:99:0,111,1405	0/0:11,0:11:33.08:0,33,396	0/0:32,0:32:96.29:0,96,1216	0/0:28,0:28:78.24:0,78,997	0/0:29,0:29:87.28:0,87,1128	0/0:28,0:28:81.26:0,81,1051	0/0:21,0:21:60.18:0,60,765	1/1:4,20:26:68.85:793,69,0	1/1:3,14:18:41.80:492,42,0	0/0:20,0:20:57.19:0,57,740	0/0:13,0:13:39.13:0,39,506	0/0:36,0:36:99:0,108,1399	0/0:20,0:20:54.18:0,54,699	0/0:26,0:26:78.24:0,78,998	0/0:31,0:31:93.29:0,93,1191	0/0:25,0:25:69.22:0,69,893	0/0:30,0:30:90.28:0,90,1150	0/0:20,0:20:60.19:0,60,777	0/0:6,0:6:18.04:0,18,216
chr10	28388705	.	C	CA	13075.50	PASS	AB=1.000;AC=50;AF=0.893;AN=56;BaseQRankSum=-11.459;DP=695;FS=1.547;HRun=10;HaplotypeScore=80.0780;InbreedingCoeff=0.6580;MQ=72.62;MQ0=1;MQRankSum=-1.408;QD=20.09;ReadPosRankSum=0.817;VQSLOD=5.6888;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,24:32:25.60:651,26,0	1/1:1,8:9:21.05:224,21,0	0/1:36,0:23:4.42:4,0,174	0/1:26,0:22:1.87:2,0,89	1/1:5,20:25:28.04:460,28,0	1/1:3,17:20:20.47:423,20,0	1/1:2,22:24:63.16:670,63,0	1/1:5,31:36:68.54:907,69,0	1/1:1,14:15:24.06:256,24,0	1/1:8,29:37:65.67:903,66,0	1/1:8,25:33:1.23:602,1,0	1/1:11,20:31:42.11:448,42,0	1/1:4,11:16:33.04:340,33,0	1/1:3,21:24:45.11:480,45,0	1/1:2,25:27:60.15:640,60,0	1/1:2,20:22:20.47:422,20,0	0/0:2,0:27:46.85:0,47,136	0/0:2,0:17:28.51:0,29,82	1/1:3,22:25:63.15:666,63,0	1/1:4,32:36:96:937,96,0	1/1:2,16:19:26.32:469,26,0	1/1:5,26:32:22.73:637,23,0	1/1:3,12:16:17.29:374,17,0	1/1:5,22:28:13.70:541,14,0	1/1:1,18:19:51.13:544,51,0	1/1:2,28:31:84.45:849,84,0	1/1:1,17:19:38.67:398,39,0	1/1:3,10:13:2.48:230,2,0
chr10	28391498	.	GAAAAT	G	1811.12	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.575;DP=622;FS=3.312;HRun=0;HaplotypeScore=108.7058;InbreedingCoeff=0.9639;MQ=71.05;MQ0=0;MQRankSum=-2.154;QD=41.16;ReadPosRankSum=3.791;VQSLOD=3.8589;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:84.27:0,84,2465	0/0:9,0:9:21.06:0,21,526	0/0:9,0:9:9.03:0,9,245	0/0:10,0:10:20.43:0,20,472	0/0:30,0:30:81.28:0,81,2423	0/0:21,0:21:48.15:0,48,1379	0/0:10,0:10:24.08:0,24,724	0/0:45,0:45:99:0,117,3413	0/0:10,0:10:24.08:0,24,681	0/0:28,0:28:72.25:0,72,2171	0/0:25,0:25:66.23:0,66,1979	0/0:23,0:23:60.21:0,60,1778	0/0:19,0:19:54.19:0,54,1605	0/0:20,0:20:54.19:0,54,1625	0/0:28,0:28:72.24:0,72,2105	0/0:30,0:30:78.27:0,78,2349	1/1:4,28:32:69.24:1389,69,0	1/1:0,12:12:27.09:543,27,0	0/0:24,0:24:66.23:0,66,1941	0/0:27,0:27:72.25:0,72,2099	0/0:19,0:19:45.15:0,45,1326	0/0:11,0:11:33.10:0,33,878	0/0:18,0:18:54.19:0,54,1627	0/0:15,0:15:36.12:0,36,1057	0/0:37,0:37:96.33:0,96,2863	0/0:30,0:30:90.31:0,90,2706	0/0:31,0:31:81.28:0,81,2425	0/0:19,0:19:54.19:0,54,1625
chr10	28391619	.	A	AT	1056.05	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-6.175;DP=618;FS=0.641;HRun=8;HaplotypeScore=59.2135;InbreedingCoeff=0.9956;MQ=79.86;MQ0=0;MQRankSum=-1.410;QD=25.14;ReadPosRankSum=-0.756;VQSLOD=4.0642;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,1:22:28.42:0,28,514	0/0:10,0:10:27.01:0,27,247	0/0:17,0:18:25.46:0,25,221	0/0:13,0:13:27.78:0,28,227	0/0:26,0:26:66.01:0,66,596	0/0:23,0:22:57.03:0,57,522	0/0:21,0:21:57.01:0,57,517	0/0:43,0:43:99:0,111,1016	0/0:19,0:19:47.95:0,48,425	0/0:21,0:21:56.99:0,57,514	0/0:30,0:30:84.04:0,84,769	0/0:17,0:17:42.01:0,42,380	0/0:24,0:24:63.01:0,63,571	0/0:20,0:20:51.03:0,51,467	0/0:22,0:22:56.99:0,57,512	0/0:21,0:21:63.03:0,63,576	1/1:6,14:20:42.12:485,42,0	1/1:4,18:22:63.02:693,63,0	0/0:19,0:19:48:0,48,434	0/0:34,0:34:96:0,96,864	0/0:21,0:21:60.01:0,60,544	0/0:23,0:23:63.01:0,63,572	0/0:27,0:27:72:0,72,649	0/0:13,0:13:32.99:0,33,295	0/0:24,0:24:66.01:0,66,594	0/0:17,0:17:45.01:0,45,408	0/0:40,0:40:99:0,114,1043	0/0:8,0:8:21.01:0,21,192
chr10	28392457	.	G	GA	292.90	PASS	AC=18;AF=0.750;AN=24;DP=135;FS=0.000;HRun=0;HaplotypeScore=22.2366;InbreedingCoeff=0.2958;MQ=29.39;MQ0=7;QD=5.33;VQSLOD=2.5504;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	./.	1/1:1,7:10:2.94:18,3,0	./.	./.	./.	1/1:0,3:3:8.93:63,9,0	./.	1/1:0,9:9:4.72:16,5,0	0/0:1,3:5:0:0,0,0	0/0:2,3:5:0:0,0,0	./.	1/1:1,1:4:3.44:22,3,0	./.	1/1:1,0:6:5.46:29,5,0	1/1:0,3:3:8.93:63,9,0	./.	0/0:7,2:6:0:0,0,0	1/1:1,6:7:2.37:8,2,0	./.	./.	./.	1/1:0,4:5:11.91:84,12,0	1/1:0,5:5:10.85:61,11,0	./.
chr10	28396886	.	CTT	C	566.64	PASS	AB=0.846;AC=6;AF=0.107;AN=56;BaseQRankSum=6.674;DP=609;FS=0.000;HRun=15;HaplotypeScore=78.9393;InbreedingCoeff=0.5818;MQ=68.68;MQ0=1;MQRankSum=-0.757;QD=5.90;ReadPosRankSum=4.363;VQSLOD=-0.3268;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,2:33:17.51:0,18,718	0/0:7,0:8:14.51:0,15,141	0/0:18,0:14:26.51:0,27,245	0/0:12,0:11:11.49:0,11,112	0/0:26,1:28:31.10:0,31,613	0/0:18,0:19:47.59:0,48,558	0/0:22,0:24:53.60:0,54,634	0/1:32,4:37:14.36:14,0,563	0/0:13,1:17:6.09:0,6,271	0/0:20,0:28:66.05:0,66,627	0/0:15,0:17:25.54:0,26,347	0/0:9,0:10:26.57:0,27,334	0/0:22,0:23:50.40:0,50,505	0/0:13,0:16:29.41:0,29,327	0/0:22,1:25:34.86:0,35,585	0/0:21,0:23:53.07:0,53,613	1/1:6,18:25:42.34:378,42,0	1/1:5,12:19:27.74:292,28,0	0/0:18,1:21:15.14:0,15,402	0/0:26,0:27:56.97:0,57,616	0/0:10,0:13:24.03:0,24,264	0/0:25,0:26:67.49:0,67,767	0/1:11,2:15:18.07:18,0,275	0/0:18,2:21:15.12:0,15,392	0/0:26,1:30:21.13:0,21,720	0/0:24,1:34:53.63:0,54,772	0/0:29,0:31:60.64:0,61,609	0/0:7,0:7:21.06:0,21,270
chr10	28399890	.	GAAT	G	1838.16	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.933;DP=674;FS=7.175;HRun=0;HaplotypeScore=89.9912;InbreedingCoeff=0.9553;MQ=76.55;MQ0=0;MQRankSum=-1.697;QD=40.85;ReadPosRankSum=3.218;VQSLOD=4.4953;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:93.23:0,93,1979	0/0:13,0:13:39.13:0,39,854	0/0:14,0:14:42.13:0,42,839	0/0:14,0:13:38.16:0,38,731	0/0:35,0:35:99:0,102,2277	0/0:35,0:35:99:0,102,2234	0/0:12,0:12:33.10:0,33,677	0/0:39,0:39:99:0,114,2442	0/0:24,0:24:69.24:0,69,1540	0/0:28,0:28:72.23:0,72,1513	0/0:20,0:20:57.20:0,57,1271	0/0:28,0:28:81.26:0,81,1768	0/0:28,0:28:75.26:0,75,1672	0/0:24,0:24:66.23:0,66,1447	0/0:20,0:20:54.19:0,54,1207	0/0:29,0:29:87.30:0,87,1923	1/1:1,32:33:87.30:1421,87,0	1/1:0,12:12:33.11:539,33,0	0/0:19,0:19:51.17:0,51,1096	0/0:37,0:37:99:0,108,2287	0/0:4,0:4:12.02:0,12,225	0/0:20,0:20:60.21:0,60,1322	0/0:25,0:25:72.25:0,72,1609	0/0:11,0:11:30.09:0,30,626	0/0:42,0:42:99:0,123,2745	0/0:33,0:33:99:0,99,2166	0/0:34,0:34:99:0,99,2189	0/0:7,0:7:9.03:0,9,199
chr10	28400783	.	C	CA	1675.73	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.244;DP=735;FS=2.021;HRun=1;HaplotypeScore=71.0472;InbreedingCoeff=0.9978;MQ=93.09;MQ0=0;MQRankSum=-6.051;QD=38.08;ReadPosRankSum=2.007;VQSLOD=4.4143;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:78.23:0,78,995	0/0:11,0:11:33.11:0,33,428	0/0:35,0:35:99:0,99,1224	0/0:29,0:29:72.20:0,72,886	0/0:24,0:24:72.22:0,72,919	0/0:39,0:39:99:0,114,1480	0/0:24,0:24:69.21:0,69,882	0/0:32,0:32:93.29:0,93,1184	0/0:32,0:32:96.26:0,96,1200	0/0:33,0:33:99:0,99,1285	0/0:23,0:23:69.22:0,69,894	0/0:27,0:27:75.20:0,75,942	0/0:29,0:29:84.26:0,84,1076	0/0:18,0:18:48.15:0,48,618	0/0:28,0:28:84.26:0,84,1076	0/0:30,0:30:87.25:0,87,1088	1/1:0,18:18:51.17:764,51,0	1/1:1,25:26:69.23:1033,69,0	0/0:18,0:18:51.11:0,51,605	0/0:32,0:32:87.27:0,87,1115	0/0:26,0:26:75.19:0,75,928	0/0:15,0:15:45.15:0,45,584	0/0:16,0:16:48.16:0,48,623	0/0:22,0:22:60.19:0,60,776	0/0:24,0:24:72.22:0,72,920	0/0:31,0:31:90.26:0,90,1118	0/0:59,0:59:99:0,172,2205	0/0:7,0:7:21.07:0,21,273
chr10	28401312	.	A	ACT	2389.75	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=10.013;DP=659;FS=9.244;HRun=0;HaplotypeScore=79.3832;InbreedingCoeff=0.9843;MQ=88.51;MQ0=0;MQRankSum=-2.019;QD=48.77;ReadPosRankSum=2.258;VQSLOD=4.3798;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:78.24:0,78,1126	0/0:15,0:15:45.14:0,45,643	0/0:27,0:28:69.49:0,69,1029	0/0:19,0:19:48.16:0,48,687	0/0:25,0:25:75.24:0,75,1084	0/0:18,0:18:54.18:0,54,790	0/0:20,0:20:60.20:0,60,879	0/0:30,0:30:87.24:0,87,1224	0/0:21,0:21:63.21:0,63,926	0/0:22,0:22:60.20:0,60,881	0/0:16,0:16:42.13:0,42,599	0/0:24,0:24:69.23:0,69,1013	0/0:31,0:31:90.29:0,90,1304	0/0:29,0:29:84.28:0,84,1234	0/0:29,0:29:87.28:0,87,1260	0/0:19,0:19:57.18:0,57,820	1/1:1,25:27:72.25:1332,72,0	1/1:0,22:22:63.22:1180,63,0	0/0:22,0:22:63.15:0,63,851	0/0:30,0:30:78.25:0,78,1129	0/0:18,0:18:51.17:0,51,750	0/0:29,0:29:87.29:0,87,1280	0/0:19,0:19:54.17:0,54,775	0/0:19,0:18:57.17:0,57,818	0/0:28,0:28:81.27:0,81,1192	0/0:20,0:20:60.19:0,60,864	0/0:42,0:42:99:0,126,1772	0/0:8,0:8:12.04:0,12,177
chr10	28402290	.	CCAACTTT	C	852.28	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.855;DP=619;FS=2.347;HRun=0;HaplotypeScore=139.3231;InbreedingCoeff=0.9810;MQ=89.71;MQ0=0;MQRankSum=-6.137;QD=50.13;ReadPosRankSum=-0.061;VQSLOD=3.5177;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,102,3925	0/0:7,0:7:21.07:0,21,847	0/0:26,0:26:72.18:0,72,2512	0/0:21,0:21:54.19:0,54,1953	0/0:33,0:33:93.31:0,93,3400	0/0:34,0:34:99:0,99,3974	0/0:21,0:21:63.22:0,63,2373	0/0:24,0:24:68.99:0,69,2576	0/0:21,0:21:63.22:0,63,2534	0/0:18,0:18:51.18:0,51,2055	0/0:18,0:18:51.18:0,51,1995	0/0:27,0:27:81.28:0,81,3130	0/0:28,0:28:84.27:0,84,3238	0/0:28,0:28:78.27:0,78,2938	0/0:22,0:22:63.21:0,63,2268	0/0:28,0:28:78.27:0,78,3114	1/1:0,5:5:12.04:297,12,0	1/1:1,11:12:27.09:672,27,0	0/0:12,0:12:36.12:0,36,1221	0/0:20,0:20:57.20:0,57,2231	0/0:20,0:20:54.19:0,54,2171	0/0:24,0:24:72.25:0,72,2678	0/0:21,0:21:63.20:0,63,2351	0/0:28,0:28:81.28:0,81,3156	0/0:21,0:21:63.22:0,63,2410	0/0:24,0:23:72.25:0,72,2892	0/0:29,0:29:87.28:0,87,3320	0/0:12,0:12:30.10:0,30,1212
chr10	28404104	.	GTAC	G	1458.20	PASS	AB=0.705;AC=7;AF=0.125;AN=56;BaseQRankSum=8.398;DP=481;FS=63.281;HRun=0;HaplotypeScore=86.9853;InbreedingCoeff=-0.1742;MQ=61.11;MQ0=0;MQRankSum=-8.289;QD=12.25;ReadPosRankSum=4.923;VQSLOD=0.9470;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:7,3:10:8.05:0,8,359	0/1:8,3:11:16.64:17,0,280	0/0:24,0:22:66.23:0,66,1592	0/0:13,0:13:39.02:0,39,742	0/0:14,5:19:18.11:0,18,443	0/0:12,5:17:9.50:0,9,220	0/0:9,5:14:15.99:0,16,369	0/1:19,11:30:99:524,0,1134	0/1:3,6:9:17.72:18,0,102	0/1:14,6:20:99:273,0,734	0/0:11,8:19:15.52:0,16,322	0/0:13,8:21:11.47:0,11,384	0/0:10,4:14:18.53:0,19,419	0/0:8,4:12:9.39:0,9,222	0/0:12,8:20:9.96:0,10,175	0/0:13,9:22:17.45:0,17,463	0/0:8,2:10:14.96:0,15,216	0/0:1,0:1:3.01:0,3,71	0/1:9,5:13:99:184,0,535	0/0:15,16:31:28.75:0,29,592	0/0:10,1:11:18.06:0,18,416	0/0:17,14:31:20.08:0,20,395	0/0:11,10:20:15.52:0,16,347	0/0:7,1:8:6.02:0,6,148	0/0:17,15:32:13.45:0,13,299	0/1:11,10:20:99:445,0,568	0/1:6,8:14:99:126,0,127	0/0:10,1:12:10.11:0,10,611
chr10	28410801	.	G	GCA	603.74	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.763;DP=807;FS=11.439;HRun=0;HaplotypeScore=105.1033;InbreedingCoeff=0.9909;MQ=69.20;MQ0=3;MQRankSum=-0.986;QD=18.30;ReadPosRankSum=0.202;VQSLOD=3.0108;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:39:51.49:0,51,866	0/0:12,0:13:35.94:0,36,423	0/0:47,0:25:41.54:0,42,403	0/0:50,0:39:42.96:0,43,514	0/0:22,0:25:62.66:0,63,684	0/0:27,0:27:66.13:0,66,750	0/0:19,0:19:39.08:0,39,446	0/0:42,0:42:96.27:0,96,1147	0/0:26,0:26:75.17:0,75,866	0/0:33,0:34:90.06:0,90,1024	0/0:22,0:22:60.16:0,60,715	0/0:31,1:32:32.03:0,32,905	0/0:23,0:23:51.15:0,51,617	0/0:32,0:32:78.23:0,78,954	0/0:32,0:32:78.22:0,78,942	0/0:35,0:34:84.22:0,84,1003	1/1:9,14:22:27.09:434,27,0	1/1:2,8:10:18.06:289,18,0	0/0:21,0:22:47.96:0,48,539	0/0:43,0:43:99:0,114,1336	0/0:36,0:37:75.02:0,75,865	0/0:26,0:26:72.19:0,72,855	0/0:22,0:24:56.81:0,57,635	0/0:21,0:23:59.97:0,60,681	0/0:38,0:38:99:0,102,1178	0/0:23,0:24:66.02:0,66,773	0/0:32,0:32:78.17:0,78,901	0/0:6,0:6:18.06:0,18,223
chr10	28411653	.	TCATTCCCCTCCCAGTCCACCCTCTGACTATTCCATATCA	T	1829.93	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-1.473;DP=503;FS=1.093;HRun=0;HaplotypeScore=444.9272;InbreedingCoeff=0.9658;MQ=61.48;MQ0=0;MQRankSum=-3.354;QD=70.38;ReadPosRankSum=0.863;VQSLOD=0.5750;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:63.22:0,63,8646	0/0:12,0:12:36.12:0,36,4221	0/0:20,0:15:36.12:0,36,2474	0/0:16,0:14:38.91:0,39,1884	0/0:25,0:25:63.19:0,63,7619	0/0:24,0:24:72.11:0,72,9712	0/0:12,0:12:30.10:0,30,3131	0/0:37,0:37:99:0,102,6590	0/0:14,0:14:39.13:0,39,5096	0/0:16,0:16:48.13:0,48,6062	0/0:12,0:12:36.11:0,36,4456	0/0:13,0:13:36.12:0,36,4697	0/0:14,0:14:42.10:0,42,5466	0/0:22,0:22:63.22:0,63,6871	0/0:24,0:24:69.24:0,69,10001	0/0:16,0:16:45.15:0,45,5618	1/1:14,0:14:27.09:1040,27,0	1/1:2,10:12:9.03:904,9,0	0/0:12,0:12:36.11:0,36,2834	0/0:22,0:22:57.20:0,57,8962	0/0:14,0:14:42.14:0,42,6022	0/0:19,0:19:54.19:0,54,7521	0/0:18,0:18:54.19:0,54,6454	0/0:11,0:11:33.10:0,33,4792	0/0:25,0:25:72.25:0,72,9879	0/0:22,0:22:60.20:0,60,8359	0/0:25,0:25:72.25:0,72,9382	0/0:8,0:8:21.07:0,21,2653
chr10	28411659	.	C	CT	332.38	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.770;DP=505;FS=0.000;HRun=0;HaplotypeScore=55.8106;InbreedingCoeff=0.9107;MQ=58.04;MQ0=1;MQRankSum=-2.669;QD=27.70;ReadPosRankSum=-1.400;VQSLOD=3.4409;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:66.22:0,66,920	0/0:12,0:12:36.12:0,36,503	0/0:24,0:17:42.14:0,42,564	0/0:16,0:13:36.07:0,36,445	0/0:20,0:20:60.19:0,60,816	0/0:24,0:24:72.11:0,72,979	0/0:11,0:11:30.10:0,30,419	0/0:39,0:39:99:0,114,1481	0/0:14,0:14:42.14:0,42,587	0/0:16,0:16:45.12:0,45,608	0/0:12,0:12:36.11:0,36,486	0/0:16,0:16:45.06:0,45,556	0/0:14,0:14:38.82:0,39,544	0/0:22,0:22:63.20:0,63,863	0/0:23,0:23:69.23:0,69,964	0/0:15,0:15:45.15:0,45,629	1/1:0,12:12:27.09:426,27,0	0/0:10,0:10:6.66:0,7,21	0/0:13,0:13:39.11:0,39,514	0/0:24,0:24:63.17:0,63,831	0/0:21,0:21:63.12:0,63,787	0/0:19,0:19:54.18:0,54,752	0/0:18,0:18:54.17:0,54,738	0/0:11,0:11:33.11:0,33,460	0/0:25,0:25:75.19:0,75,1007	0/0:20,0:20:60.20:0,60,839	0/0:24,0:24:72.24:0,72,1001	0/0:7,0:7:21.07:0,21,293
chr10	28411662	.	T	TC	110.05	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.017;DP=510;FS=2.827;HRun=4;HaplotypeScore=59.9863;InbreedingCoeff=0.9023;MQ=57.99;MQ0=1;MQRankSum=-4.138;QD=11.01;ReadPosRankSum=-2.396;VQSLOD=0.4468;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:60.05:0,60,739	0/0:12,0:12:36.08:0,36,417	0/0:25,0:19:41.61:0,42,535	0/0:16,0:13:27.08:0,27,318	0/0:20,0:20:60.18:0,60,719	0/0:25,0:25:69.20:0,69,817	0/0:13,0:13:27.08:0,27,324	0/0:40,0:40:99:0,111,1311	0/0:14,0:14:42.13:0,42,504	0/0:16,0:16:45.13:0,45,531	0/0:15,0:15:32.99:0,33,376	0/0:16,0:16:42.13:0,42,502	0/0:14,0:14:36.11:0,36,432	0/0:21,0:21:54.16:0,54,640	0/0:22,0:22:66.20:0,66,792	0/0:16,0:16:42.13:0,42,503	1/1:5,5:10:20.38:202,20,0	0/0:10,0:10:6.66:0,7,21	0/0:13,0:13:36.11:0,36,431	0/0:23,0:23:63.19:0,63,753	0/0:21,0:21:60.17:0,60,704	0/0:20,0:20:54.17:0,54,648	0/0:17,0:17:48.15:0,48,576	0/0:11,0:11:33.06:0,33,380	0/0:25,0:25:72.22:0,72,864	0/0:20,0:20:60.18:0,60,720	0/0:24,0:24:66.20:0,66,792	0/0:7,0:7:18.06:0,18,216
chr10	28418171	.	TAC	T	3546.25	PASS	AB=0.978;AC=39;AF=0.696;AN=56;BaseQRankSum=10.083;DP=490;FS=11.880;HRun=0;HaplotypeScore=125.0173;InbreedingCoeff=-0.1243;MQ=69.68;MQ0=3;MQRankSum=-1.921;QD=7.61;ReadPosRankSum=12.210;VQSLOD=0.8712;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:13,1:13:80.53:81,0,92	0/1:6,0:6:2.46:23,0,2	0/0:11,0:11:23.18:0,23,352	0/0:13,0:13:13.20:0,13,490	0/1:13,0:13:42.97:51,0,43	0/1:18,0:18:48.36:114,0,48	0/1:23,0:23:14.47:180,0,14	0/1:38,1:39:99:104,0,278	0/1:19,0:19:71.41:124,0,71	0/1:17,1:18:85.16:121,0,85	1/1:14,1:15:15.32:164,15,0	0/1:27,1:27:7.83:276,0,8	1/1:18,1:19:25.31:238,25,0	1/1:21,0:21:12.07:202,12,0	1/1:20,2:21:20.68:234,21,0	1/1:16,0:16:7.61:101,8,0	0/1:13,0:12:12.21:102,0,12	1/1:5,0:5:10.78:47,11,0	1/1:14,0:14:11.53:110,12,0	0/1:26,1:27:54.07:178,0,54	1/1:21,0:21:0.24:138,0,0	1/1:13,0:13:16.93:101,17,0	1/1:23,0:23:9.81:185,10,0	1/1:14,0:13:26.92:123,27,0	0/1:13,1:13:64.72:73,0,65	0/1:20,0:20:27.58:124,0,28	1/1:25,0:24:50.16:298,50,0	1/1:6,0:6:14.60:54,15,0
chr10	28418172	.	ACC	A	11876.05	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-3.767;DP=488;FS=28.489;HRun=10;HaplotypeScore=98.6062;InbreedingCoeff=0.9542;MQ=70.61;MQ0=3;MQRankSum=-2.858;QD=25.65;ReadPosRankSum=4.093;VQSLOD=2.8017;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,9:13:21.04:232,21,0	1/1:1,5:6:12.03:134,12,0	0/0:11,0:11:18.03:0,18,222	0/0:13,0:14:23.41:0,23,394	1/1:2,11:13:20.91:234,21,0	1/1:4,14:18:39.10:435,39,0	1/1:3,20:23:57.15:635,57,0	1/1:15,24:39:63.11:702,63,0	1/1:5,13:19:39.09:435,39,0	1/1:5,12:17:36.09:400,36,0	1/1:2,13:15:42.11:467,42,0	1/1:5,22:27:60.08:725,60,0	1/1:2,17:19:51.13:567,51,0	1/1:2,19:21:54.13:602,54,0	1/1:5,17:21:57.15:635,57,0	1/1:2,14:16:33.08:368,33,0	1/1:2,11:13:30.07:334,30,0	1/1:0,5:5:12.03:134,12,0	1/1:2,12:14:36.55:391,37,0	1/1:5,21:26:66.17:735,66,0	1/1:2,19:21:51.12:568,51,0	1/1:1,12:13:30.08:334,30,0	1/1:2,21:23:54.13:602,54,0	1/1:0,14:13:30.08:334,30,0	1/1:5,8:12:27.06:301,27,0	1/1:3,17:20:51.11:568,51,0	1/1:1,24:25:72.19:802,72,0	1/1:0,6:6:18.05:201,18,0
chr10	28418238	.	GA	G	5296.63	PASS	AB=0.981;AC=45;AF=0.833;AN=54;BaseQRankSum=4.505;DP=629;FS=6.698;HRun=2;HaplotypeScore=226.9619;InbreedingCoeff=0.4103;MQ=64.72;MQ0=11;MQRankSum=-7.886;QD=11.32;ReadPosRankSum=3.105;VQSLOD=3.4851;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:16,1:16:9.53:65,0,10	1/1:8,2:10:23.66:261,24,0	0/0:58,0:33:34.34:0,34,970	0/0:60,0:45:90.65:0,91,1310	0/0:19,0:19:1.33:0,1,6	1/1:21,5:25:17.15:159,17,0	1/1:10,1:11:4.25:33,4,0	1/1:19,14:32:85.36:952,85,0	1/1:16,1:17:9:80,9,0	1/1:17,2:15:44.66:440,45,0	0/1:14,0:14:0.01:0,0,0	1/1:20,3:23:10.80:109,11,0	1/1:20,1:21:24.07:287,24,0	1/1:21,1:22:4.72:80,5,0	1/1:29,4:33:10.91:55,11,0	1/1:18,2:20:15.43:163,15,0	1/1:16,0:16:2.37:147,2,0	0/1:6,0:5:22.22:57,0,22	1/1:25,3:28:69.10:705,69,0	1/1:22,3:23:12.86:110,13,0	1/1:8,0:6:2.98:23,3,0	1/1:19,2:19:3.01:34,3,0	./.	1/1:13,3:15:2.41:12,2,0	1/1:15,2:17:6.02:70,6,0	1/1:17,4:20:59.67:597,60,0	1/1:31,6:35:73.86:668,74,0	1/1:6,0:6:18.03:190,18,0
chr10	28418239	.	A	AG	7445.55	PASS	AB=0.580;AC=47;AF=0.839;AN=56;BaseQRankSum=4.491;DP=636;FS=4.872;HRun=1;HaplotypeScore=221.9575;InbreedingCoeff=0.3972;MQ=63.22;MQ0=12;MQRankSum=-7.949;QD=14.43;ReadPosRankSum=1.901;VQSLOD=4.8018;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:3,14:16:0.08:73,0,0	1/1:3,7:10:23.66:272,24,0	0/0:59,0:33:10.85:0,11,914	0/0:61,0:44:74.26:0,74,1254	1/1:0,19:19:1.17:5,1,0	1/1:8,19:26:18.11:224,18,0	1/1:3,7:10:6.54:40,7,0	1/1:21,13:34:95.26:1197,95,0	1/1:2,16:18:11.63:148,12,0	1/1:4,16:16:47.33:648,47,0	0/1:1,13:14:0:0,0,0	1/1:4,19:23:13.58:138,14,0	1/1:2,19:22:26.67:331,27,0	1/1:3,20:22:13.40:138,13,0	1/1:6,26:32:11.19:81,11,0	1/1:4,17:21:20.24:235,20,0	0/1:5,11:16:9.47:155,0,9	0/1:4,4:6:27.75:90,0,28	1/1:5,21:26:71.83:1054,72,0	1/1:4,21:23:12.51:176,13,0	1/1:0,7:6:3.01:48,3,0	1/1:3,17:19:3.01:34,3,0	0/1:6,18:23:0:0,0,0	1/1:3,12:15:3.17:38,3,0	1/1:3,15:18:6.49:84,6,0	1/1:5,16:21:62.80:914,63,0	1/1:7,30:35:74.82:1059,75,0	1/1:1,6:7:18.53:262,19,0
chr10	28418245	.	GA	G	6539.10	PASS	AB=0.900;AC=51;AF=0.911;AN=56;BaseQRankSum=2.902;DP=676;FS=11.277;HRun=2;HaplotypeScore=228.0424;InbreedingCoeff=0.4636;MQ=60.63;MQ0=15;MQRankSum=-6.929;QD=11.82;ReadPosRankSum=2.527;VQSLOD=2.3616;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:15,3:17:5.79:74,6,0	1/1:10,1:11:20.70:206,21,0	0/0:56,0:29:64.07:0,64,936	0/0:66,0:49:66.80:0,67,1357	1/1:21,0:21:1.78:57,2,0	1/1:22,5:26:26.65:275,27,0	1/1:10,2:11:11.70:116,12,0	1/1:26,14:39:99:1084,104,0	1/1:17,3:20:17.79:151,18,0	1/1:15,6:17:50.63:495,51,0	1/1:16,2:17:9.01:100,9,0	1/1:21,3:24:16.17:141,16,0	1/1:18,4:22:26.75:295,27,0	1/1:21,2:22:7.31:90,7,0	1/1:27,6:33:11.40:84,11,0	1/1:19,3:22:23.20:261,23,0	1/1:14,2:16:0.85:164,1,0	0/1:7,1:7:23.40:56,0,23	1/1:21,5:26:65.56:700,66,0	1/1:19,10:26:23.16:246,23,0	1/1:8,0:6:2.49:9,2,0	1/1:15,6:19:6.02:71,6,0	1/1:22,4:25:5.98:61,6,0	1/1:15,2:16:2.42:12,2,0	1/1:17,6:23:27.05:308,27,0	1/1:16,6:21:58.88:557,59,0	1/1:29,7:34:73.99:676,74,0	1/1:7,1:8:24.02:249,24,0
chr10	28418246	.	A	AG	9235.90	PASS	AB=0.607;AC=50;AF=0.893;AN=56;BaseQRankSum=1.905;DP=669;FS=7.916;HRun=1;HaplotypeScore=210.0943;InbreedingCoeff=0.5355;MQ=63.97;MQ0=15;MQRankSum=-6.801;QD=16.98;ReadPosRankSum=2.389;VQSLOD=4.5439;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,16:19:9.03:129,9,0	1/1:3,7:11:21.06:261,21,0	0/0:54,0:28:46.35:0,46,867	0/0:70,0:52:54.88:0,55,1292	1/1:2,15:20:7.17:67,7,0	1/1:6,20:25:27.09:388,27,0	1/1:2,10:11:12.51:172,13,0	1/1:14,24:37:99:1441,105,0	1/1:5,14:19:18.03:246,18,0	1/1:9,12:17:51.17:749,51,0	1/1:6,12:17:9.02:100,9,0	1/1:3,21:24:16.82:223,17,0	1/1:4,17:21:27.09:365,27,0	1/1:2,18:21:13.81:177,14,0	1/1:7,23:31:12.03:172,12,0	1/1:5,15:23:28.78:339,29,0	1/1:3,12:15:0.80:240,1,0	0/1:4,5:7:32.46:106,0,32	1/1:6,20:26:54.88:1071,55,0	1/1:11,17:26:21.07:281,21,0	0/1:2,6:6:0:0,0,0	1/1:6,15:19:6.02:72,6,0	1/1:7,17:23:6:61,6,0	1/1:4,11:15:3.17:38,3,0	1/1:11,12:23:27.53:322,28,0	1/1:7,13:19:54.18:819,54,0	1/1:8,27:35:74.83:1077,75,0	1/1:4,6:10:24.04:321,24,0
chr10	28418773	.	T	TC	31850.20	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=0.547;DP=856;FS=2.725;HRun=1;HaplotypeScore=122.6562;InbreedingCoeff=0.9461;MQ=91.89;MQ0=0;MQRankSum=-13.784;QD=40.73;ReadPosRankSum=8.129;VQSLOD=3.5800;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,28:29:81.27:1214,81,0	1/1:0,10:10:27.09:405,27,0	0/0:36,0:36:99:0,105,1335	0/0:38,0:38:99:0,108,1375	1/1:1,29:30:78.22:1142,78,0	1/1:2,30:32:87.29:1304,87,0	1/1:2,30:32:84.28:1259,84,0	1/1:3,33:36:99:1482,99,0	1/1:0,43:43:99:1752,117,0	1/1:1,40:41:99:1786,120,0	1/1:0,23:23:66.22:988,66,0	1/1:0,32:32:87.29:1304,87,0	1/1:0,44:44:99:1864,126,0	1/1:2,32:34:87.29:1304,87,0	1/1:2,33:35:99:1484,99,0	1/1:0,34:34:99:1484,99,0	1/1:2,31:33:87.29:1304,87,0	1/1:0,8:8:21.07:315,21,0	1/1:2,28:30:84.24:1212,84,0	1/1:0,26:26:75.25:1124,75,0	1/1:5,38:43:99:1619,108,0	1/1:1,30:31:81.27:1214,81,0	1/1:1,22:23:60.20:899,60,0	1/1:1,26:27:78.26:1169,78,0	1/1:0,22:22:54.18:809,54,0	1/1:2,37:39:99:1618,111,0	1/1:0,42:42:99:1706,114,0	1/1:0,3:3:6.02:90,6,0
chr10	28420843	.	A	AAG	7191.74	PASS	AB=0.702;AC=46;AF=0.821;AN=56;BaseQRankSum=0.299;DP=319;FS=45.165;HRun=0;HaplotypeScore=144.2248;InbreedingCoeff=0.1582;MQ=41.66;MQ0=16;MQRankSum=-3.384;QD=25.50;ReadPosRankSum=0.865;VQSLOD=3.4299;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,6:13:13.85:154,14,0	0/1:1,4:6:19.28:153,0,19	0/0:22,0:6:14.88:0,15,196	0/0:15,0:7:18:0,18,240	1/1:7,8:20:23.95:328,24,0	0/1:7,3:11:15.43:479,0,15	1/1:4,0:6:9.03:172,9,0	1/1:2,3:3:9.03:176,9,0	1/1:6,3:10:21.07:318,21,0	1/1:4,8:15:44.59:716,45,0	1/1:2,8:13:21.66:142,22,0	0/1:1,5:9:33.16:176,0,33	0/1:7,4:16:44.71:344,0,45	1/1:3,1:11:20.38:231,20,0	1/1:3,2:8:14.93:223,15,0	1/1:7,1:12:14.14:358,14,0	0/1:2,5:10:19.45:156,0,19	1/1:0,2:2:3.01:58,3,0	1/1:4,2:7:3.20:284,3,0	1/1:5,3:12:34.63:337,35,0	1/1:2,1:3:2.85:54,3,0	1/1:6,5:12:23.91:249,24,0	1/1:4,5:15:20.92:245,21,0	1/1:5,3:11:6.52:182,7,0	1/1:11,2:15:26.97:402,27,0	1/1:3,9:14:14.10:593,14,0	0/1:13,8:23:7.98:603,0,8	1/1:1,1:2:2.89:60,3,0
chr10	28420844	.	GATA	G	1226.95	PASS	AB=0.979;AC=39;AF=0.696;AN=56;BaseQRankSum=-0.494;DP=312;FS=43.115;HRun=0;HaplotypeScore=165.4954;InbreedingCoeff=-0.1264;MQ=40.74;MQ0=16;MQRankSum=-1.016;QD=4.46;ReadPosRankSum=-0.327;VQSLOD=1.2697;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:13:2.68:28,3,0	0/1:6,0:6:24.77:25,0,25	0/0:23,0:6:15.92:0,16,173	0/0:14,0:6:14.96:0,15,156	1/1:19,0:19:8.69:48,9,0	0/1:12,0:11:10.15:95,0,10	1/1:6,0:6:8.75:50,9,0	1/1:5,0:3:8.50:42,8,0	1/1:8,2:10:20.94:125,21,0	0/1:14,1:15:45.89:77,0,46	1/1:13,0:13:1.09:2,1,0	0/1:8,0:8:25.04:41,0,25	0/1:15,0:15:80.70:81,0,85	1/1:11,0:11:1.62:40,2,0	1/1:8,0:8:14.54:100,15,0	0/1:10,2:12:2.16:76,0,2	0/1:8,0:8:4.90:5,0,75	1/1:1,0:1:2.80:13,3,0	0/1:7,0:7:5.96:78,0,6	0/1:12,0:12:0.92:23,0,1	1/1:3,0:3:2.50:9,2,0	1/1:12,0:12:3.44:38,3,0	1/1:15,0:15:13.35:68,13,0	0/1:11,0:11:11.82:57,0,12	0/1:14,0:14:7.79:77,0,8	0/1:13,1:14:17.20:68,0,17	0/1:23,0:23:47.18:97,0,47	1/1:2,0:2:3.37:17,3,0
chr10	28420847	.	A	AAG	661.65	PASS	AB=0.992;AC=36;AF=0.643;AN=56;BaseQRankSum=2.240;DP=309;FS=28.269;HRun=0;HaplotypeScore=164.7840;InbreedingCoeff=0.1552;MQ=38.42;MQ0=21;MQRankSum=-0.550;QD=2.72;ReadPosRankSum=-2.593;VQSLOD=0.8078;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:12,0:12:10.27:10,0,14	0/1:6,0:6:1.08:10,0,1	0/0:24,0:5:11.07:0,11,148	0/0:17,0:4:9.02:0,9,125	0/1:18,0:18:11.56:12,0,13	1/1:11,0:11:0.99:35,1,0	1/1:7,0:7:14.34:45,14,0	0/0:4,0:2:3.11:0,3,8	1/1:9,0:9:17.77:73,18,0	0/1:14,1:15:6.97:45,0,7	1/1:12,1:13:2.98:22,3,0	0/1:7,0:7:1.68:14,0,2	0/1:15,0:15:15.02:15,0,53	0/1:11,0:11:13.18:37,0,13	1/1:8,0:8:13.28:53,13,0	1/1:12,0:12:6.37:73,6,0	0/0:8,0:8:1.74:0,2,16	0/0:1,0:1:1.55:0,2,4	1/1:5,0:5:9.67:57,10,0	1/1:11,1:12:4.78:45,5,0	1/1:3,0:3:1.40:4,1,0	0/0:11,1:12:1.24:0,1,9	1/1:14,0:14:2.34:10,2,0	1/1:10,0:10:8.56:32,9,0	1/1:16,0:16:11.55:50,12,0	0/1:14,0:14:17.17:17,0,30	1/1:23,0:23:19.89:141,20,0	1/1:2,0:2:2.31:12,2,0
chr10	28420848	.	GATA	G	906.03	PASS	AB=0.799;AC=30;AF=0.536;AN=56;BaseQRankSum=2.713;DP=316;FS=11.429;HRun=0;HaplotypeScore=168.4775;InbreedingCoeff=0.0371;MQ=42.99;MQ0=23;MQRankSum=-2.750;QD=3.91;ReadPosRankSum=0.134;VQSLOD=2.1380;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:9,1:12:7.90:37,8,0	0/1:5,0:6:4.53:5,0,35	0/0:28,0:7:15.91:0,16,171	0/0:18,0:6:11.07:0,11,98	0/1:13,5:18:3.46:3,0,4	0/1:8,1:10:13.44:32,0,13	1/1:5,2:7:10.12:28,10,0	1/1:4,0:2:1.77:4,2,0	1/1:9,0:10:15.34:123,15,0	0/1:14,3:17:32.63:33,0,131	0/0:10,2:13:2.68:0,3,11	0/1:4,1:7:15.61:31,0,16	0/1:10,3:15:89.59:96,0,90	0/1:4,6:11:6.55:64,0,7	1/1:5,3:8:1.85:74,2,0	1/1:8,3:12:6.21:126,6,0	0/0:6,1:8:4.70:0,5,58	0/0:1,0:1:3.01:0,3,30	1/1:5,0:5:11.38:60,11,0	0/1:8,3:12:1.10:33,0,1	0/0:3,0:3:0.78:0,1,2	0/0:11,0:12:7.39:0,7,37	1/1:8,2:14:3.34:16,3,0	0/1:7,2:10:6.68:32,0,7	0/1:14,2:16:5.25:20,0,5	0/1:12,2:14:60.30:60,0,114	0/1:20,2:22:8.18:144,0,8	1/1:2,0:2:4.83:42,5,0
chr10	28420851	.	A	AAG	940.15	PASS	AB=0.900;AC=30;AF=0.536;AN=56;BaseQRankSum=1.940;DP=355;FS=25.436;HRun=0;HaplotypeScore=193.3175;InbreedingCoeff=-0.1539;MQ=44.49;MQ0=26;MQRankSum=-4.129;QD=3.56;ReadPosRankSum=-1.793;VQSLOD=0.5366;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:18,0:17:12.46:43,0,12	0/1:5,1:6:14.59:15,0,23	0/0:33,0:10:16.35:0,16,143	0/1:24,0:5:1.61:2,0,69	0/0:20,1:21:8.43:0,8,47	0/1:11,0:10:23.48:23,0,52	1/1:2,4:6:8.99:78,9,0	0/1:10,0:8:47.95:53,0,48	1/1:10,1:11:10.20:71,10,0	0/0:17,0:17:15.90:0,16,213	1/1:13,0:13:2.50:9,2,0	0/1:6,1:7:2.87:8,0,3	0/1:11,5:16:49.54:58,0,50	0/1:9,1:10:45.73:58,0,46	1/1:5,3:8:12.61:74,13,0	0/1:10,3:13:66.39:93,0,66	0/1:8,2:10:43.18:50,0,43	0/0:2,0:2:5.92:0,6,42	0/1:4,1:5:27.79:41,0,28	0/1:12,0:12:23.93:48,0,24	0/1:6,0:6:0:0,0,0	1/1:9,2:11:4.15:14,4,0	0/1:15,0:15:4.03:31,0,4	1/1:10,0:10:0.59:34,1,0	1/1:16,1:17:3.45:23,3,0	0/0:17,0:17:24.50:0,24,257	0/1:19,4:23:70.80:241,0,71	0/1:1,1:2:22.38:30,0,22
chr10	28420873	.	ATAAG	A	4977.77	PASS	AB=0.834;AC=41;AF=0.732;AN=56;BaseQRankSum=6.714;DP=471;FS=14.109;HRun=0;HaplotypeScore=168.0730;InbreedingCoeff=0.0654;MQ=58.67;MQ0=27;MQRankSum=-3.529;QD=13.94;ReadPosRankSum=5.402;VQSLOD=3.3751;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:16,3:18:26.45:85,0,26	1/1:2,1:3:1.25:33,1,0	0/0:59,0:25:33.09:0,33,799	0/0:49,0:19:18.57:0,19,552	0/1:19,5:23:0.13:0,0,0	0/1:19,3:21:9.57:74,0,10	0/1:12,2:12:28.85:93,0,29	0/1:11,8:18:99:224,0,354	1/1:1,9:10:12.04:185,12,0	1/1:15,4:19:34.20:743,34,0	1/1:7,4:11:12.04:185,12,0	1/1:6,3:8:15.05:216,15,0	1/1:12,5:17:33.10:454,33,0	1/1:9,7:16:2.58:172,3,0	1/1:7,3:10:3.15:163,3,0	1/1:8,6:14:15.85:286,16,0	0/1:7,2:9:51.53:92,0,52	0/1:3,0:3:31.21:31,0,56	0/1:2,11:11:8.76:405,0,9	1/1:14,6:20:5.56:86,6,0	0/0:5,0:5:2.89:0,3,26	1/1:9,3:12:6.02:71,6,0	1/1:3,16:17:8.02:112,8,0	1/1:10,3:13:8.92:113,9,0	1/1:1,19:20:0.98:33,1,0	1/1:8,4:12:13.54:489,14,0	1/1:17,6:22:6.38:463,6,0	0/1:6,0:5:16.78:170,0,17
chr10	28420875	.	AAG	A	3514.53	PASS	AB=0.813;AC=40;AF=0.714;AN=56;BaseQRankSum=6.446;DP=485;FS=15.451;HRun=0;HaplotypeScore=170.1756;InbreedingCoeff=0.0264;MQ=59.45;MQ0=27;MQRankSum=-2.497;QD=9.63;ReadPosRankSum=4.482;VQSLOD=2.5375;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:13,7:19:25.24:65,0,25	1/1:2,1:3:0.83:7,1,0	0/0:61,0:27:11.16:0,11,797	0/0:53,0:21:44.03:0,44,639	0/1:10,14:23:0.20:0,0,0	0/1:6,16:21:8.65:59,0,9	0/1:8,6:12:28.80:94,0,29	0/1:19,0:18:99:167,0,504	1/1:10,0:10:11.92:96,12,0	1/1:6,14:20:33.97:514,34,0	1/1:11,1:12:14.99:139,15,0	1/1:8,1:8:13.27:151,13,0	1/1:6,11:17:25.66:276,26,0	1/1:8,8:16:3.06:125,3,0	1/1:3,7:10:3.49:112,3,0	1/1:9,5:14:15.76:194,16,0	0/1:9,2:11:43.88:85,0,44	0/1:3,0:3:30.16:30,0,92	0/1:13,0:11:25.32:309,0,25	1/1:8,13:21:5.76:73,6,0	0/0:5,0:5:3:0,3,25	1/1:4,8:12:6.01:65,6,0	1/1:19,0:17:7.50:93,7,0	1/1:4,7:13:8.74:65,9,0	1/1:20,0:20:1.09:19,1,0	0/1:5,7:12:3.58:308,0,4	1/1:11,12:22:4.33:346,4,0	0/1:8,0:7:12:121,0,12
chr10	28420980	.	TATTTCCTC	T	156.71	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=2.862;DP=503;FS=0.000;HRun=0;HaplotypeScore=121.0890;InbreedingCoeff=0.8305;MQ=73.43;MQ0=0;MQRankSum=-2.601;QD=22.39;ReadPosRankSum=0.399;VQSLOD=2.9094;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:45.15:0,45,1969	0/0:6,0:6:18.06:0,18,797	0/0:13,0:13:39.13:0,39,1457	0/0:8,0:8:24.08:0,24,845	0/0:30,0:30:87.30:0,87,3787	0/0:23,0:22:66.23:0,66,2857	0/0:16,0:16:48.16:0,48,2062	0/0:24,0:24:72.25:0,72,2948	0/0:15,0:15:45.15:0,45,1853	0/0:27,0:27:75.26:0,75,3260	0/0:24,0:24:72.25:0,72,3054	0/0:15,0:15:45.15:0,45,1809	0/0:25,0:25:75.26:0,75,3151	0/0:25,0:25:75.26:0,75,3311	0/0:20,0:20:54.19:0,54,2267	0/0:22,0:22:66.23:0,66,2775	1/1:1,3:4:6.02:170,6,0	1/1:2,1:3:3.01:84,3,0	0/0:15,0:15:45.15:0,45,1850	0/0:24,0:24:72.25:0,72,3095	0/0:10,0:10:30.10:0,30,1300	0/0:18,0:18:51.18:0,51,2080	0/0:27,0:27:81.28:0,81,3511	0/0:13,0:13:36.12:0,36,1542	0/0:28,0:28:84.29:0,84,3591	0/0:15,0:15:45.11:0,45,1833	0/0:20,0:20:57.20:0,57,2482	0/0:13,0:13:39.13:0,39,1541
chr10	28421912	.	TACATATATAC	T	2993.12	PASS	AB=0.500;AC=18;AF=0.750;AN=24;BaseQRankSum=1.595;DP=368;FS=6.696;HRun=0;HaplotypeScore=80.6070;InbreedingCoeff=0.6884;MQ=44.66;MQ0=1;MQRankSum=-2.539;QD=20.64;ReadPosRankSum=2.735;VQSLOD=1.5657;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:6,0:6:18.04:0,18,663	0/0:8,0:6:18.06:0,18,708	./.	./.	./.	1/1:8,0:7:18.06:406,18,0	./.	1/1:0,22:22:35.54:705,36,0	./.	1/1:15,0:15:3.01:38,3,0	./.	./.	./.	0/1:0,12:12:0:0,0,0	./.	1/1:4,0:4:3.01:75,3,0	1/1:0,6:6:18.06:393,18,0	./.	./.	./.	0/1:0,23:23:0:0,0,0	./.	./.	1/1:0,28:28:39.18:757,39,0	1/1:20,0:19:24.08:509,24,0	1/1:7,0:7:9.03:216,9,0
chr10	28421918	.	TATAC	T	2265.16	PASS	AB=1.000;AC=18;AF=0.750;AN=24;BaseQRankSum=2.627;DP=391;FS=6.211;HRun=0;HaplotypeScore=67.7354;InbreedingCoeff=0.6948;MQ=50.72;MQ0=1;MQRankSum=-3.359;QD=14.71;ReadPosRankSum=1.951;VQSLOD=2.0958;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:8,0:8:22.23:0,22,463	0/0:9,0:7:20.84:0,21,426	./.	./.	./.	1/1:2,12:13:36.07:526,36,0	./.	1/1:22,0:22:35.45:465,35,0	./.	1/1:0,16:16:3.01:38,3,0	./.	./.	./.	0/1:12,0:12:0:0,0,0	./.	1/1:0,5:5:3.01:56,3,0	1/1:6,0:6:18.05:259,18,0	./.	./.	./.	0/1:23,0:23:0:0,0,0	./.	./.	1/1:28,0:28:38.81:565,39,0	1/1:1,20:20:21.95:319,22,0	1/1:0,7:7:9.03:143,9,0
chr10	28424946	.	T	TGTG	224.72	PASS	AB=0.915;AC=19;AF=0.413;AN=46;BaseQRankSum=3.778;DP=262;FS=3.535;HRun=0;HaplotypeScore=59.2087;InbreedingCoeff=0.0223;MQ=47.01;MQ0=28;MQRankSum=1.183;QD=1.58;ReadPosRankSum=2.048;VQSLOD=1.4065;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	0/1:2,0:3:7.32:35,0,7	0/0:36,0:9:7.86:0,8,300	0/1:50,0:12:19.84:20,0,179	./.	./.	0/0:12,1:13:5.30:0,5,34	0/0:8,0:6:8.88:0,9,58	1/1:8,0:5:4.63:16,5,0	0/0:8,0:7:20.15:0,20,115	0/1:7,0:7:0:0,0,0	0/1:7,2:8:33.37:51,0,33	1/1:6,0:6:5.45:50,5,0	./.	0/0:8,0:8:0:0,0,0	1/1:4,0:5:2.97:20,3,0	0/1:10,0:8:25.84:26,0,34	0/1:3,0:3:2.18:2,0,14	0/0:4,0:2:5.91:0,6,38	0/1:9,0:8:2.47:2,0,8	./.	0/1:10,1:11:0:0,0,0	0/0:7,0:7:8.34:0,8,39	0/1:4,0:4:4.19:4,0,8	0/0:5,1:6:2.96:0,3,19	0/1:5,0:5:24.87:67,0,25	0/1:5,0:4:22.60:35,0,23	1/1:1,0:1:2.99:23,3,0
chr10	28425007	.	T	TGA	397.55	PASS	AB=0.986;AC=21;AF=0.375;AN=56;BaseQRankSum=-2.837;DP=313;FS=0.000;HRun=0;HaplotypeScore=71.9427;InbreedingCoeff=0.3277;MQ=26.65;MQ0=46;MQRankSum=0.869;QD=2.63;ReadPosRankSum=4.050;VQSLOD=1.1214;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:8,0:6:1.30:1,0,5	0/0:2,0:2:2.90:0,3,16	0/0:29,0:1:2.99:0,3,24	0/0:38,0:5:11.93:0,12,98	0/1:15,0:14:0:0,0,0	1/1:14,1:14:5.76:42,6,0	0/0:13,0:9:0:0,0,0	0/1:22,0:17:15.55:118,0,16	0/1:6,0:5:0.03:0,0,0	0/1:6,1:5:6.53:46,0,7	0/1:12,0:10:0.01:0,0,0	0/0:11,0:9:3.43:0,3,20	1/1:4,0:3:3.42:21,3,0	0/0:10,0:7:0.47:0,0,1	0/1:7,0:6:0:0,0,0	0/1:7,0:7:0:0,0,0	0/1:10,0:8:1.67:25,0,2	0/0:3,0:2:2.92:0,3,17	1/1:10,0:7:14.84:104,15,0	1/1:9,1:10:1.16:3,1,0	0/0:16,0:6:2.97:0,3,20	0/0:7,1:8:4.35:0,4,26	0/0:7,0:7:0:0,0,0	0/0:8,0:5:0:0,0,0	0/0:9,0:9:2.74:0,3,13	1/1:10,1:10:10.33:112,10,0	0/0:8,0:7:10.02:0,10,54	1/1:7,0:4:8.79:53,9,0
chr10	28425043	.	TGTGTGTGTAAAACAAGTAATG	T	3101.41	PASS	AB=1.000;AC=21;AF=0.420;AN=50;BaseQRankSum=4.562;DP=326;FS=0.873;HRun=0;HaplotypeScore=128.1046;InbreedingCoeff=0.0656;MQ=37.16;MQ0=25;MQRankSum=-3.072;QD=18.35;ReadPosRankSum=2.669;VQSLOD=2.5190;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:10,0:8:5.51:128,6,0	0/0:5,0:5:3.01:0,3,35	0/0:11,0:8:24.08:0,24,1446	0/0:18,0:10:30.10:0,30,1963	./.	0/0:16,0:15:9.50:0,10,322	0/1:18,0:14:0:0,0,0	0/1:13,0:9:99:210,0,425	0/1:9,0:8:0.16:0,0,1	0/1:11,0:9:99:485,0,176	0/0:11,0:9:0.47:0,0,1	0/1:16,0:14:71.12:111,0,71	0/1:5,0:4:5.27:5,0,141	./.	0/0:11,0:10:0:0,0,0	0/0:8,0:8:0:0,0,0	1/1:3,9:11:7.65:539,8,0	1/1:1,0:1:3.01:37,3,0	0/0:8,0:3:3.01:0,3,111	1/1:14,0:14:1.93:120,2,0	0/0:11,0:3:3.01:0,3,55	0/0:16,0:16:5.73:0,6,119	1/1:11,0:11:0.47:1,0,0	./.	1/1:10,0:10:0.94:2,1,0	0/1:17,0:16:99:907,0,381	0/1:13,0:12:39.74:381,0,40	0/1:9,0:6:31.20:303,0,31
chr10	28425051	.	TAAAACAAGTAATG	T	4792.94	PASS	AC=28;AF=0.583;AN=48;BaseQRankSum=6.437;DP=264;FS=15.070;HRun=0;HaplotypeScore=96.6982;InbreedingCoeff=0.4881;MQ=56.29;MQ0=11;MQRankSum=-3.878;QD=40.62;ReadPosRankSum=2.316;VQSLOD=3.0560;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,1:6:5.64:233,6,0	1/1:0,4:5:3.01:70,3,0	0/0:15,0:12:28.69:0,29,2028	0/0:20,0:12:36.12:0,36,2340	./.	0/0:7,2:10:0.47:0,0,1	0/0:7,6:11:0.47:0,0,1	1/1:2,5:6:15.01:351,15,0	0/0:2,6:8:0.47:0,0,1	1/1:2,5:9:24.08:862,24,0	0/0:1,3:5:0.47:0,0,1	1/1:5,5:11:3.01:119,3,0	1/1:1,3:4:2.21:118,2,0	./.	0/0:1,7:8:0:0,0,0	0/0:0,8:9:0.47:0,0,1	1/1:11,0:11:8.08:319,8,0	1/1:0,1:1:3.01:119,3,0	1/1:5,2:2:3.01:48,3,0	1/1:1,4:9:8.98:354,9,0	./.	1/1:3,10:14:2.97:72,3,0	0/0:2,7:11:1.25:0,1,3	./.	0/0:3,6:9:0:0,0,0	1/1:3,11:14:33.11:1134,33,0	1/1:0,10:11:18.06:641,18,0	1/1:1,4:4:9.03:355,9,0
chr10	28425060	.	TAATG	T	1503.56	PASS	AB=0.853;AC=29;AF=0.806;AN=36;BaseQRankSum=7.172;DP=211;FS=11.405;HRun=0;HaplotypeScore=75.8633;InbreedingCoeff=0.5259;MQ=70.90;MQ0=1;MQRankSum=-5.749;QD=13.67;ReadPosRankSum=3.256;VQSLOD=2.1522;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,3:5:6.02:86,6,0	1/1:4,0:5:3.01:40,3,0	0/0:19,0:17:48.64:0,49,1259	0/0:22,0:14:42.14:0,42,1151	./.	./.	0/1:7,2:9:0:0,0,0	1/1:5,0:5:14.98:161,15,0	./.	1/1:6,2:8:24.08:327,24,0	./.	1/1:5,2:7:3.01:36,3,0	1/1:3,0:3:3.01:30,3,0	./.	./.	./.	1/1:9,0:9:9.02:98,9,0	1/1:1,0:1:3.01:36,3,0	1/1:2,0:1:2.92:17,3,0	1/1:4,4:8:9.03:116,9,0	./.	0/1:11,1:12:0:0,0,0	0/1:7,1:9:0:0,0,0	./.	./.	1/1:11,0:11:33.03:355,33,0	1/1:10,2:11:18.05:207,18,0	1/1:4,0:4:9.03:107,9,0
chr10	28425064	.	G	GT	766.33	PASS	AB=0.964;AC=26;AF=0.684;AN=38;BaseQRankSum=5.280;DP=242;FS=18.498;HRun=1;HaplotypeScore=83.2726;InbreedingCoeff=0.5369;MQ=67.24;MQ0=1;MQRankSum=-4.364;QD=6.72;ReadPosRankSum=0.662;VQSLOD=-0.6741;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,0:6:3.43:19,3,0	1/1:4,1:5:2.99:23,3,0	0/0:19,0:17:43.72:0,44,655	0/0:20,0:15:42.14:0,42,586	./.	./.	0/0:10,0:10:0.89:0,1,2	1/1:8,0:7:18.11:187,18,0	./.	1/1:10,1:11:20.32:158,20,0	./.	1/1:8,0:8:4.82:31,5,0	1/1:5,0:5:1.25:3,1,0	./.	./.	0/0:11,0:11:0:0,0,0	0/0:10,0:10:1.41:0,1,4	1/1:1,0:1:1.82:5,2,0	1/1:4,0:3:9.01:106,9,0	1/1:11,0:11:4.08:23,4,0	./.	0/1:12,0:12:0:0,0,0	0/1:12,1:13:0:0,0,0	./.	./.	1/1:11,0:11:23:178,23,0	1/1:15,0:14:15.11:117,15,0	1/1:4,0:4:6.60:29,7,0
chr10	28426683	.	T	TA	308.19	PASS	AC=26;AF=0.722;AN=36;BaseQRankSum=-0.085;DP=112;FS=1.013;HRun=1;HaplotypeScore=26.5082;InbreedingCoeff=0.5238;MQ=109.99;MQ0=7;MQRankSum=-2.934;QD=11.85;ReadPosRankSum=-5.644;VQSLOD=-0.3471;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,0:1:2.99:23,3,0	./.	0/0:15,0:12:36.12:0,36,497	0/0:20,0:18:48.07:0,48,625	1/1:5,0:4:5.92:42,6,0	./.	1/1:1,0:1:2.96:19,3,0	./.	1/1:1,0:1:2.92:17,3,0	1/1:0,1:1:3.01:41,3,0	./.	1/1:2,0:2:5.94:42,6,0	1/1:1,0:1:3:27,3,0	1/1:1,0:1:2.94:18,3,0	1/1:2,0:2:5.93:44,6,0	./.	0/0:27,0:26:78.21:0,78,1067	0/0:18,0:18:54.13:0,54,731	1/1:3,2:4:6.02:84,6,0	./.	./.	./.	1/1:0,3:3:2.96:19,3,0	1/1:2,0:2:5.97:47,6,0	1/1:1,0:1:2.96:19,3,0	0/0:2,0:2:3.01:0,3,42	./.	./.
chr10	28436360	.	CTT	C	9543.15	PASS	AB=1.000;AC=53;AF=0.946;AN=56;BaseQRankSum=-8.000;DP=596;FS=0.686;HRun=13;HaplotypeScore=88.1456;InbreedingCoeff=0.5615;MQ=80.12;MQ0=10;MQRankSum=-0.299;QD=18.07;ReadPosRankSum=5.391;VQSLOD=4.2266;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,19:23:50.75:527,51,0	1/1:0,7:7:21.03:204,21,0	0/0:67,1:29:23.09:0,23,328	0/1:50,0:28:8.10:8,0,151	1/1:2,19:22:56.81:535,57,0	1/1:5,17:22:48.05:466,48,0	1/1:1,8:11:25.65:226,26,0	1/1:13,18:34:22.43:479,22,0	1/1:2,15:19:17.89:274,18,0	1/1:6,18:25:41.90:453,42,0	1/1:2,19:22:53.78:506,54,0	1/1:3,8:13:17.85:211,18,0	1/1:1,7:11:23.23:181,23,0	1/1:1,11:14:38.54:344,39,0	1/1:3,20:23:51.04:495,51,0	1/1:2,9:11:4.24:219,4,0	1/1:1,26:27:69.09:662,69,0	1/1:4,11:15:21.01:204,21,0	1/1:3,16:19:47.96:452,48,0	1/1:2,25:30:57.82:660,58,0	1/1:1,5:6:6:58,6,0	1/1:3,16:19:38.98:378,39,0	1/1:5,20:27:47.91:498,48,0	1/1:0,8:10:20.70:236,21,0	1/1:3,16:20:29.96:341,30,0	1/1:4,19:23:57.03:545,57,0	1/1:3,12:16:14.85:245,15,0	1/1:1,5:7:8.95:137,9,0
chr10	28437660	.	A	AG	24047.17	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-11.209;DP=659;FS=3.417;HRun=1;HaplotypeScore=57.9490;InbreedingCoeff=0.9994;MQ=89.65;MQ0=0;MQRankSum=-8.975;QD=41.39;ReadPosRankSum=3.464;VQSLOD=5.3874;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,26:27:78.26:1168,78,0	1/1:0,11:11:27.09:404,27,0	0/0:28,0:28:81.24:0,81,1002	0/0:20,0:20:53.27:0,53,616	1/1:0,31:31:93.21:1364,93,0	1/1:1,25:26:69.23:1034,69,0	1/1:1,15:16:36.12:539,36,0	1/1:1,32:33:96.33:1437,96,0	1/1:2,19:21:57.19:854,57,0	1/1:0,26:26:78.25:1149,78,0	1/1:1,21:22:63.21:935,63,0	1/1:0,27:27:78.26:1169,78,0	1/1:0,33:33:93.21:1392,93,0	1/1:1,27:28:72.24:1079,72,0	1/1:0,25:25:69.23:1034,69,0	1/1:2,15:17:45.15:674,45,0	0/0:18,0:18:51.17:0,51,662	0/0:12,0:12:36.10:0,36,452	1/1:0,10:10:30.09:429,30,0	1/1:0,30:30:87.20:1253,87,0	1/1:0,26:26:72.24:1079,72,0	1/1:0,21:21:63.21:942,63,0	1/1:0,21:21:57.19:853,57,0	1/1:0,24:24:69.23:1034,69,0	1/1:0,22:22:57.19:854,57,0	1/1:1,31:32:90.30:1345,90,0	1/1:4,37:41:99:1573,105,0	1/1:0,11:11:30.10:450,30,0
chr10	28453005	.	CA	C	10212.29	PASS	AB=0.778;AC=52;AF=0.929;AN=56;BaseQRankSum=-4.294;DP=569;FS=17.585;HRun=10;HaplotypeScore=80.9368;InbreedingCoeff=0.6187;MQ=60.03;MQ0=6;MQRankSum=-2.475;QD=19.16;ReadPosRankSum=4.803;VQSLOD=3.9468;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,29:31:80.98:703,81,0	1/1:0,8:8:21:182,21,0	0/0:34,2:21:20.59:0,21,362	0/1:35,0:22:0.30:0,0,242	1/1:5,17:22:47.98:415,48,0	1/1:3,13:15:29.98:260,30,0	1/1:4,22:26:53.94:468,54,0	1/1:11,17:28:62.96:546,63,0	1/1:4,20:24:59.98:519,60,0	1/1:2,20:22:59.97:521,60,0	1/1:0,11:11:26.99:234,27,0	1/1:4,18:22:23.80:435,24,0	1/1:1,16:17:38.56:338,39,0	1/1:5,18:23:17.83:383,18,0	1/1:4,18:22:47.98:416,48,0	1/1:0,20:20:59.99:520,60,0	1/1:1,11:12:29.99:260,30,0	1/1:2,23:25:34.61:515,35,0	1/1:4,14:17:38.96:333,39,0	1/1:2,13:16:38.03:318,38,0	1/1:3,16:19:5.63:256,6,0	1/1:3,16:19:47.97:413,48,0	0/1:2,8:10:6.05:181,0,6	1/1:1,21:22:62.97:545,63,0	1/1:0,16:16:38.99:339,39,0	1/1:5,15:20:50.94:433,51,0	1/1:3,20:23:59.98:520,60,0	1/1:0,6:6:18:156,18,0
chr10	28453253	.	AGCT	A	28795.82	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=9.576;DP=681;FS=8.221;HRun=0;HaplotypeScore=179.7505;InbreedingCoeff=0.9667;MQ=76.91;MQ0=0;MQRankSum=-13.198;QD=46.75;ReadPosRankSum=8.511;VQSLOD=5.4769;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,37:38:93.28:1600,93,0	1/1:0,9:9:21.07:370,21,0	0/0:29,0:29:87.25:0,87,1910	0/0:36,0:36:99:0,108,2366	1/1:0,18:18:48.16:846,48,0	1/1:1,18:19:45.15:794,45,0	1/1:1,34:35:90.27:1554,90,0	1/1:3,24:27:69.22:1181,69,0	1/1:2,29:31:84.27:1449,84,0	1/1:0,20:20:57.19:988,57,0	1/1:0,7:7:21.03:337,21,0	1/1:1,38:39:99:1924,111,0	1/1:0,24:24:72.25:1269,72,0	1/1:2,30:32:90.31:1579,90,0	1/1:0,40:40:99:2011,114,0	1/1:2,13:15:36.12:635,36,0	1/1:0,30:30:87.29:1498,87,0	1/1:0,25:25:69.19:1183,69,0	1/1:2,17:19:51.17:887,51,0	1/1:0,19:19:51.17:899,51,0	1/1:0,19:19:54.19:953,54,0	1/1:0,22:22:63.17:1063,63,0	1/1:0,12:12:36.12:634,36,0	1/1:1,39:40:96.01:1683,96,0	1/1:0,15:15:39.13:688,39,0	1/1:1,23:24:66.21:1134,66,0	1/1:0,29:29:84.29:1475,84,0	1/1:0,8:8:9.03:159,9,0
chr10	28453470	.	A	AT	12502.42	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-4.100;DP=639;FS=15.977;HRun=9;HaplotypeScore=77.2988;InbreedingCoeff=0.9379;MQ=76.18;MQ0=0;MQRankSum=-6.446;QD=20.43;ReadPosRankSum=4.327;VQSLOD=4.0302;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,27:33:64.01:910,64,0	1/1:1,0:16:36.96:185,37,0	0/0:15,0:15:24.07:0,24,254	0/0:12,0:12:5.71:0,6,198	1/1:1,15:16:39.11:431,39,0	1/1:2,11:13:30.08:332,30,0	1/1:3,26:29:72.19:796,72,0	1/1:4,0:22:48.36:248,48,0	1/1:5,14:20:41.95:445,42,0	1/1:7,23:30:66.14:710,66,0	1/1:2,18:20:51.09:545,51,0	1/1:6,23:31:80.86:843,81,0	1/1:3,0:21:45.49:228,45,0	1/1:2,2:20:42.81:232,43,0	1/1:4,1:25:53.97:270,54,0	1/1:1,16:17:42.11:465,42,0	1/1:2,18:20:54.15:597,54,0	1/1:1,23:26:68.85:725,69,0	1/1:4,16:20:48.13:530,48,0	1/1:5,28:34:78.04:799,78,0	1/1:5,25:30:66.18:730,66,0	1/1:4,19:23:51.14:563,51,0	1/1:3,0:15:28.36:141,28,0	1/1:2,1:34:73.86:388,74,0	1/1:3,29:33:72.02:778,72,0	1/1:5,0:21:39.33:200,39,0	1/1:7,0:30:51.17:256,51,0	1/1:1,0:13:31.25:156,31,0
chr10	28454071	.	AAAAG	A	18157.60	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=0.993;DP=628;FS=21.639;HRun=0;HaplotypeScore=148.0659;InbreedingCoeff=0.9812;MQ=80.55;MQ0=0;MQRankSum=-6.155;QD=35.81;ReadPosRankSum=5.717;VQSLOD=3.1696;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,28:31:48.16:841,48,0	1/1:0,7:7:9.03:158,9,0	0/0:35,0:33:72.71:0,73,1584	0/0:37,0:33:48.34:0,48,1052	1/1:3,22:25:40.29:668,40,0	1/1:1,18:19:45.15:789,45,0	1/1:4,19:23:42.10:700,42,0	1/1:3,27:30:81.25:1339,81,0	1/1:2,18:20:45.04:789,45,0	1/1:3,23:26:48.26:1116,48,0	1/1:2,17:19:36.12:631,36,0	1/1:0,20:20:35.85:624,36,0	1/1:1,21:22:57.20:991,57,0	1/1:0,20:20:51.17:894,51,0	1/1:0,18:18:48.16:841,48,0	1/1:3,17:20:45.10:786,45,0	0/0:25,0:25:63.22:0,63,1564	0/0:24,0:24:57.20:0,57,1405	1/1:3,18:21:51.16:831,51,0	1/1:2,17:19:39:615,39,0	1/1:2,24:26:47.25:807,47,0	1/1:3,14:17:24.08:420,24,0	1/1:0,13:13:29.83:525,30,0	1/1:1,18:19:26.81:473,27,0	1/1:0,14:14:21.07:368,21,0	1/1:3,21:24:60.18:1005,60,0	1/1:5,37:42:87.30:1525,87,0	1/1:0,12:12:24.08:421,24,0
chr10	28454342	.	GA	G	19992.02	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=0.535;DP=737;FS=16.488;HRun=5;HaplotypeScore=120.0546;InbreedingCoeff=0.9988;MQ=79.44;MQ0=0;MQRankSum=-8.305;QD=28.93;ReadPosRankSum=7.167;VQSLOD=2.9349;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:3,51:54:99:1599,141,0	1/1:1,11:12:33.09:374,33,0	0/0:22,0:22:45.12:0,45,566	0/0:24,0:23:61.40:0,61,768	1/1:3,25:28:66.18:746,66,0	1/1:2,21:23:51.14:579,51,0	1/1:1,17:18:45.13:511,45,0	1/1:1,26:27:72.16:787,72,0	1/1:4,19:23:54.15:613,54,0	1/1:2,35:37:99:1190,105,0	1/1:2,28:30:72.20:815,72,0	1/1:4,17:21:51.14:578,51,0	1/1:0,41:41:99:1293,114,0	1/1:1,25:26:69.20:782,69,0	1/1:2,40:42:99:1157,102,0	1/1:2,19:21:54.15:613,54,0	1/1:2,26:28:66.19:749,66,0	1/1:3,18:21:42.12:476,42,0	1/1:0,22:22:63.18:712,63,0	1/1:2,25:27:69.19:781,69,0	1/1:1,8:9:24.07:271,24,0	1/1:2,24:26:60.17:681,60,0	1/1:0,23:23:63.18:715,63,0	1/1:0,29:29:72.21:817,72,0	1/1:2,17:19:42.12:477,42,0	1/1:0,29:29:87.24:978,87,0	1/1:2,33:35:90.26:1019,90,0	1/1:0,20:20:60.17:681,60,0
chr10	28455172	.	T	TTC	4956.65	PASS	AB=0.875;AC=55;AF=0.982;AN=56;BaseQRankSum=0.800;DP=257;FS=17.176;HRun=0;HaplotypeScore=234.7215;InbreedingCoeff=-0.0495;MQ=62.28;MQ0=0;MQRankSum=-2.849;QD=19.29;ReadPosRankSum=1.382;VQSLOD=3.6769;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,0:9:18.04:214,18,0	1/1:3,0:3:6.01:64,6,0	1/1:6,0:6:10.92:94,11,0	0/1:6,0:7:36.50:81,0,37	1/1:14,0:14:25.29:267,25,0	1/1:5,1:6:9.02:99,9,0	1/1:6,0:6:12.02:133,12,0	1/1:17,0:17:39.93:430,40,0	1/1:15,0:15:27.04:283,27,0	1/1:9,0:9:9.01:87,9,0	1/1:6,0:6:8.96:94,9,0	1/1:8,0:8:12.02:126,12,0	1/1:9,0:9:24.03:252,24,0	1/1:8,0:8:18.03:188,18,0	1/1:11,0:11:18.03:182,18,0	1/1:14,1:15:29.04:256,29,0	1/1:24,0:24:48.04:476,48,0	1/1:9,0:9:15.02:166,15,0	1/1:7,0:7:21.03:218,21,0	1/1:5,0:5:12.02:129,12,0	1/1:8,1:9:18.02:210,18,0	1/1:9,0:9:21.06:246,21,0	1/1:6,0:6:6.01:64,6,0	1/1:6,0:6:5.75:39,6,0	1/1:3,2:5:9.01:86,9,0	1/1:10,0:10:18.86:162,19,0	1/1:12,0:12:24.03:249,24,0	1/1:6,0:6:6.01:62,6,0
chr10	28455173	.	T	TCTTGAGCTCAGG	2637.41	PASS	AB=0.714;AC=45;AF=0.978;AN=46;BaseQRankSum=-2.047;DP=59;FS=3.093;HRun=0;HaplotypeScore=22.0920;InbreedingCoeff=-0.1644;MQ=102.14;MQ0=0;MQRankSum=-1.990;QD=45.47;ReadPosRankSum=0.952;VQSLOD=2.4640;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,0:3:6.02:133,6,0	./.	1/1:0,1:4:12.04:552,12,0	0/1:3,0:5:68.27:212,0,68	1/1:3,0:3:3:25,3,0	1/1:2,0:2:3.01:54,3,0	1/1:3,0:3:9.02:130,9,0	1/1:3,0:3:9.03:175,9,0	1/1:1,0:1:3.01:55,3,0	1/1:2,0:2:3.48:118,3,0	1/1:2,0:2:3.01:39,3,0	1/1:2,0:2:3.01:55,3,0	1/1:1,0:1:3.01:67,3,0	1/1:2,0:2:6.02:111,6,0	1/1:4,0:4:3.01:55,3,0	1/1:1,0:1:3.01:56,3,0	1/1:3,0:3:3.01:44,3,0	1/1:1,0:1:3.01:48,3,0	1/1:1,0:1:3.01:66,3,0	./.	1/1:5,0:5:12.01:209,12,0	1/1:3,0:3:6.02:112,6,0	./.	./.	1/1:3,0:3:6.02:238,6,0	1/1:2,0:2:6:89,6,0	1/1:2,0:2:6:80,6,0	./.
chr10	28457473	.	CCATA	C	4298.85	PASS	AB=0.780;AC=30;AF=0.577;AN=52;BaseQRankSum=10.685;DP=411;FS=11.776;HRun=0;HaplotypeScore=69.7329;InbreedingCoeff=0.7088;MQ=65.69;MQ0=1;MQRankSum=0.872;QD=18.69;ReadPosRankSum=1.875;VQSLOD=3.5731;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,8:19:17.98:282,18,0	0/0:4,0:4:9.03:0,9,213	./.	./.	1/1:7,8:16:11.93:188,12,0	1/1:6,5:11:15.05:235,15,0	1/1:14,3:17:5.05:53,5,0	0/0:17,0:16:7.27:0,7,144	1/1:4,16:20:45.15:706,45,0	1/1:4,15:19:45.08:607,45,0	0/1:5,8:13:49.99:261,0,50	0/0:12,0:12:27.09:0,27,638	0/1:15,1:16:10.92:11,0,744	0/0:19,0:19:48.15:0,48,1087	0/0:19,0:19:54.19:0,54,1255	1/1:5,5:10:15.05:235,15,0	1/1:2,4:6:3.01:47,3,0	1/1:2,12:14:27.09:423,27,0	1/1:7,5:13:18.05:263,18,0	1/1:8,3:11:9.03:141,9,0	1/1:12,9:21:18.06:282,18,0	1/1:3,4:7:6.02:94,6,0	0/0:12,0:13:27.08:0,27,558	0/0:12,0:13:18.06:0,18,411	1/1:5,12:17:30.10:470,30,0	0/0:10,0:10:9.03:0,9,213	0/0:15,0:15:27.09:0,27,626	0/0:5,0:5:3.01:0,3,58
chr10	28459827	.	A	AT	8474.13	PASS	AB=0.569;AC=25;AF=0.446;AN=56;BaseQRankSum=-4.650;DP=677;FS=3.912;HRun=1;HaplotypeScore=134.1446;InbreedingCoeff=0.7395;MQ=47.01;MQ0=20;MQRankSum=-1.019;QD=24.56;ReadPosRankSum=2.128;VQSLOD=4.9687;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:29:33.73:0,34,372	1/1:1,11:11:33.08:464,33,0	0/0:13,0:8:21.07:0,21,268	0/0:14,0:8:20.70:0,21,263	0/0:32,0:32:36.90:0,37,471	0/0:23,0:22:37.93:0,38,471	0/0:23,0:22:21.07:0,21,271	0/1:10,31:36:50.15:1263,0,50	0/0:18,0:15:18.06:0,18,234	1/1:9,27:29:7.57:1035,8,0	1/1:6,15:18:46.39:656,46,0	0/0:25,0:22:32.13:0,32,397	1/1:9,14:20:36.09:501,36,0	1/1:13,11:17:28.60:383,29,0	1/1:10,18:22:17.20:586,17,0	0/1:5,17:19:21.65:469,0,22	0/0:32,0:28:41.13:0,41,645	0/0:24,0:19:45.13:0,45,561	0/0:20,0:15:44.93:0,45,558	0/0:28,0:23:54.18:0,54,707	0/0:25,0:15:24.08:0,24,313	0/0:20,0:19:37.10:0,37,457	1/1:3,11:14:27.09:404,27,0	1/1:16,14:19:32.81:469,33,0	1/1:13,18:25:47.73:687,48,0	0/1:7,20:23:28.53:794,0,29	1/1:12,20:25:4.33:628,4,0	1/1:1,3:4:9.03:135,9,0
chr10	28459865	.	A	AG	6064.41	PASS	AB=0.742;AC=40;AF=0.769;AN=52;BaseQRankSum=0.282;DP=723;FS=1.700;HRun=0;HaplotypeScore=164.0977;InbreedingCoeff=-0.0173;MQ=25.81;MQ0=67;MQRankSum=2.486;QD=9.09;ReadPosRankSum=-1.972;VQSLOD=4.8210;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:23,10:23:10.55:182,11,0	1/1:8,4:9:18.06:261,18,0	./.	./.	1/1:15,21:32:15.96:268,16,0	0/1:12,15:21:22.84:285,0,23	1/1:13,12:22:8.98:140,9,0	0/0:47,0:28:80.97:0,81,932	1/1:14,12:16:17.68:226,18,0	0/1:29,13:25:99:410,0,182	1/1:15,4:15:15.35:203,15,0	1/1:12,20:22:11.60:340,12,0	1/1:21,10:19:14.65:326,15,0	1/1:22,6:19:13.72:188,14,0	1/1:11,10:15:7.21:217,7,0	0/1:17,12:24:99:297,0,326	1/1:22,8:21:30.73:399,31,0	0/1:12,8:12:29.68:248,0,30	0/1:24,6:21:31.61:32,0,461	1/1:4,25:21:7.28:441,7,0	1/1:16,8:13:5.80:95,6,0	1/1:11,9:18:14.45:209,14,0	1/1:11,5:14:12.33:185,12,0	0/1:16,8:8:16.20:18,0,16	1/1:29,10:27:6.67:365,7,0	0/1:19,9:22:99:320,0,171	0/1:30,11:26:28:409,0,28	0/0:9,0:2:0:0,0,0
chr10	28459908	.	AGATG	A	2274.71	PASS	AB=0.866;AC=27;AF=0.519;AN=52;BaseQRankSum=-2.747;DP=889;FS=18.704;HRun=0;HaplotypeScore=142.3321;InbreedingCoeff=0.1205;MQ=20.10;MQ0=158;MQRankSum=-1.992;QD=3.80;ReadPosRankSum=-0.952;VQSLOD=1.5312;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:45,0:25:9.86:44,10,0	1/1:7,3:5:2.97:20,3,0	./.	./.	1/1:37,0:33:5.04:32,5,0	0/0:30,0:17:0:0,0,0	0/1:16,0:14:0:0,0,0	0/1:41,0:39:46.84:620,0,47	0/0:34,0:20:11.43:0,11,102	0/1:26,15:19:99:522,0,140	1/1:17,8:21:14.84:154,15,0	0/0:41,0:25:6.81:0,7,48	1/1:24,15:24:5.19:100,5,0	1/1:23,9:18:5.12:39,5,0	1/1:21,6:16:2.97:20,3,0	0/0:36,0:26:21.95:0,22,402	0/0:43,0:15:6.34:0,6,36	0/1:29,0:11:6.48:6,0,102	0/1:26,0:13:6.79:7,0,177	0/0:33,0:19:3.45:0,3,22	0/0:30,0:12:5.69:0,6,54	1/1:18,0:16:5.39:23,5,0	1/1:13,4:12:8.81:55,9,0	0/0:37,0:13:3.01:0,3,71	0/1:31,19:31:42.30:77,0,42	0/1:22,11:20:89.13:431,0,89	0/1:38,17:31:99:244,0,126	0/1:43,2:15:15.04:34,0,15
chr10	28460199	.	GGAGAGAGA	G	1086.22	PASS	AB=0.931;AC=11;AF=0.220;AN=50;BaseQRankSum=3.163;DP=600;FS=8.121;HRun=0;HaplotypeScore=158.2059;InbreedingCoeff=0.2995;MQ=68.44;MQ0=15;MQRankSum=-3.676;QD=6.39;ReadPosRankSum=1.041;VQSLOD=2.2589;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:35:34.71:0,35,686	0/0:9,0:7:14.96:0,15,181	./.	0/0:57,0:33:0.94:0,1,2	0/0:20,0:17:2.99:0,3,24	0/0:18,0:17:21.04:0,21,567	0/0:22,0:22:24.08:0,24,803	0/1:29,0:29:2.42:2,0,33	0/0:22,0:22:27.54:0,28,706	0/0:12,0:11:11.26:0,11,84	./.	0/0:31,0:29:37.04:0,37,1021	1/1:6,6:11:2.83:74,3,0	1/1:21,10:25:5.04:449,5,0	1/1:16,3:18:12.03:247,12,0	0/1:16,0:17:15.59:18,0,16	0/0:24,0:24:31.43:0,31,1024	0/0:19,0:19:30.05:0,30,873	0/0:18,0:18:13.76:0,14,375	0/0:12,0:12:12.50:0,12,379	0/0:26,0:26:39:0,39,1011	0/0:13,0:13:6.02:0,6,106	./.	0/1:25,1:26:38.48:160,0,38	0/0:9,0:10:9:0,9,114	0/0:20,0:22:11.08:0,11,171	0/1:17,2:19:10.29:262,0,10	0/1:12,0:8:10.20:10,0,24
chr10	28462395	.	T	TG	1710.35	PASS	AB=0.811;AC=28;AF=0.519;AN=54;BaseQRankSum=1.913;DP=355;FS=4.505;HRun=1;HaplotypeScore=42.3182;InbreedingCoeff=0.4432;MQ=50.17;MQ0=33;MQRankSum=-7.033;QD=11.88;ReadPosRankSum=-0.469;VQSLOD=1.7522;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:27.06:0,27,333	1/1:0,2:2:3.01:45,3,0	0/0:29,0:6:12.79:0,13,175	0/0:18,0:4:11.98:0,12,135	0/0:23,0:21:37.69:0,38,379	0/0:26,0:26:69.22:0,69,895	0/0:16,0:16:36.12:0,36,467	0/1:4,4:5:23.89:165,0,24	0/0:12,0:12:33.11:0,33,428	0/1:3,2:3:29.93:80,0,30	1/1:4,1:2:3.01:45,3,0	0/1:12,1:12:23.81:24,0,212	1/1:1,7:7:18.06:269,18,0	1/1:2,5:3:6.02:90,6,0	1/1:2,2:1:2.97:20,3,0	1/1:0,8:7:20.95:240,21,0	0/1:14,6:17:6.39:251,0,6	1/1:0,2:2:6.02:90,6,0	0/0:31,0:24:54.60:0,55,701	0/0:25,0:21:45.73:0,46,491	0/1:17,0:17:3.08:3,0,280	0/0:14,0:11:21.07:0,21,268	1/1:6,1:6:3.01:45,3,0	./.	1/1:0,6:6:18.06:269,18,0	1/1:8,4:9:16.19:162,16,0	0/1:11,4:13:4.27:93,0,4	1/1:5,0:3:0.37:3,0,0
chr10	28462499	.	AATAT	A	677.50	PASS	AC=16;AF=1.000;AN=16;DP=198;FS=0.000;HRun=0;HaplotypeScore=12.4225;MQ=13.68;MQ0=134;QD=10.11;VQSLOD=1.1112;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,0:4:6.01:56,6,0	./.	./.	./.	1/1:4,2:2:3.01:51,3,0	1/1:2,4:4:12.04:204,12,0	./.	./.	./.	./.	./.	1/1:3,0:1:2.97:20,3,0	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	1/1:4,5:5:12.04:194,12,0	1/1:5,0:3:2.97:20,3,0	1/1:3,3:3:9.03:153,9,0	1/1:19,3:3:3.01:51,3,0
chr10	28462778	.	T	TA	4339.03	PASS	AB=0.683;AC=49;AF=0.875;AN=56;BaseQRankSum=-2.335;DP=445;FS=11.446;HRun=12;HaplotypeScore=58.7204;InbreedingCoeff=0.2671;MQ=71.83;MQ0=0;MQRankSum=-0.275;QD=10.14;ReadPosRankSum=0.650;VQSLOD=2.6927;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,11:15:17.73:175,18,0	1/1:1,0:4:8.52:43,9,0	0/1:24,0:19:1.19:1,0,67	0/0:17,0:12:11.06:0,11,57	1/1:5,13:18:8.93:264,9,0	0/1:6,10:16:79.41:116,0,79	1/1:4,6:10:15.02:146,15,0	1/1:9,2:24:36.47:216,36,0	1/1:2,16:19:38.90:364,39,0	1/1:6,15:22:38.90:365,39,0	1/1:5,11:17:29.88:277,30,0	1/1:4,14:19:23.22:247,23,0	1/1:4,0:15:11.27:55,11,0	1/1:3,1:19:18.60:104,19,0	1/1:5,0:11:14.20:71,14,0	0/1:5,13:18:4.92:267,0,5	1/1:14,0:17:27.40:172,27,0	1/1:3,1:23:11.36:58,11,0	0/1:6,7:13:16.54:177,0,17	1/1:5,4:9:11.91:94,12,0	1/1:4,8:12:17.86:160,18,0	1/1:6,6:12:17.98:165,18,0	1/1:2,0:10:17.04:85,17,0	1/1:0,0:2:5.68:28,6,0	0/1:4,13:17:0.87:154,0,1	1/1:10,0:27:42.65:241,43,0	1/1:4,3:22:27.77:177,28,0	1/1:2,1:11:20.94:117,21,0
chr10	28462850	.	GGGAA	G	719.66	PASS	AB=0.762;AC=3;AF=0.054;AN=56;BaseQRankSum=4.671;DP=524;FS=5.972;HRun=0;HaplotypeScore=82.4021;InbreedingCoeff=0.5712;MQ=58.22;MQ0=9;MQRankSum=-0.238;QD=19.45;ReadPosRankSum=0.447;VQSLOD=2.4353;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:42.09:0,42,947	0/0:8,0:8:21.06:0,21,420	0/0:21,0:8:9.02:0,9,146	0/0:35,0:19:11.52:0,12,402	0/0:18,0:18:39.12:0,39,909	0/0:29,0:29:78.10:0,78,1697	0/0:22,0:21:42.02:0,42,778	0/0:18,0:13:30.05:0,30,606	0/0:18,0:18:45.15:0,45,1077	0/0:17,0:17:48.16:0,48,1139	0/0:15,0:15:6.12:0,6,630	0/0:12,0:12:33.07:0,33,746	0/0:19,0:19:45.15:0,45,1005	0/0:19,0:18:36.12:0,36,886	0/0:32,0:31:72.25:0,72,1718	0/0:26,0:26:54.15:0,54,1265	1/1:4,17:20:24.08:403,24,0	0/1:11,5:16:15.46:422,0,15	0/0:17,0:14:36.12:0,36,855	0/0:9,0:9:24.08:0,24,575	0/0:22,0:22:54.16:0,54,1205	0/0:19,0:19:48:0,48,1086	0/0:15,0:14:42.10:0,42,931	0/0:6,0:6:18.06:0,18,442	0/0:15,0:15:39.13:0,39,917	0/0:19,0:19:54.16:0,54,1218	0/0:25,0:25:45.07:0,45,1220	0/0:15,0:15:33.08:0,33,749
chr10	28463342	.	A	ATGAC	4845.78	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=5.135;DP=652;FS=8.912;HRun=0;HaplotypeScore=147.5744;InbreedingCoeff=0.7811;MQ=73.57;MQ0=6;MQRankSum=-2.185;QD=16.26;ReadPosRankSum=-3.195;VQSLOD=3.5563;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:11,13:30:14.79:301,15,0	0/1:12,0:12:16.29:16,0,295	0/0:36,0:24:68.58:0,69,911	0/0:51,0:30:47.96:0,48,904	1/1:9,24:34:41.80:738,42,0	1/1:7,10:27:29.91:561,30,0	1/1:6,14:25:23.16:514,23,0	0/0:35,0:35:78.26:0,78,1350	1/1:7,7:19:6.01:99,6,0	0/0:31,0:31:72.22:0,72,1107	0/0:18,0:18:23.96:0,24,351	1/1:10,17:33:17.98:369,18,0	0/0:16,0:16:25.78:0,26,485	0/0:12,0:12:29.93:0,30,455	0/1:17,0:17:1.18:1,0,394	0/0:26,0:27:16.78:0,17,515	0/0:11,0:11:26.75:0,27,308	0/0:20,0:20:41.81:0,42,705	1/1:6,9:18:39.08:772,39,0	1/1:4,18:24:45.15:833,45,0	1/1:9,13:23:5.99:109,6,0	1/1:4,15:21:31.35:522,31,0	0/1:14,0:13:8.43:8,0,104	0/0:12,0:11:17.35:0,17,280	0/0:21,0:22:34.06:0,34,548	0/0:26,0:26:69.19:0,69,994	0/0:19,0:18:48.03:0,48,713	0/0:18,0:18:35.08:0,35,496
chr10	28463443	.	C	CTGTGGA	1791.90	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-5.222;DP=673;FS=8.203;HRun=0;HaplotypeScore=162.9722;InbreedingCoeff=0.9981;MQ=86.64;MQ0=0;MQRankSum=-5.968;QD=77.91;ReadPosRankSum=1.599;VQSLOD=4.5435;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,120,2984	0/0:10,0:10:30.10:0,30,769	0/0:21,0:21:57.19:0,57,1371	0/0:31,0:31:77.40:0,77,1812	0/0:37,0:37:99:0,108,2639	0/0:36,0:36:99:0,108,2765	0/0:23,0:23:60.15:0,60,1429	0/0:33,0:33:96.33:0,96,2405	0/0:16,0:16:48.09:0,48,1066	0/0:24,0:24:72.18:0,72,1773	0/0:21,0:21:63.22:0,63,1613	0/0:36,0:36:99:0,105,2579	0/0:22,0:21:63.13:0,63,1470	0/0:23,0:23:69.23:0,69,1674	0/0:25,0:25:72.25:0,72,1808	0/0:30,0:30:90.17:0,90,2134	1/1:0,9:12:27.09:1012,27,0	1/1:1,9:11:24.08:901,24,0	0/0:14,0:14:42.14:0,42,1029	0/0:24,0:24:72.19:0,72,1705	0/0:20,0:20:54.17:0,54,1330	0/0:35,0:35:99:0,105,2564	0/0:19,0:19:54.19:0,54,1383	0/0:21,0:21:48.16:0,48,1217	0/0:20,0:20:60.21:0,60,1508	0/0:24,0:24:69.24:0,69,1721	0/0:30,0:30:90.31:0,90,2299	0/0:13,0:13:39.13:0,39,999
chr10	28464161	.	CCA	C	964.96	PASS	AB=0.829;AC=6;AF=0.107;AN=56;BaseQRankSum=5.424;DP=787;FS=8.827;HRun=0;HaplotypeScore=136.1661;InbreedingCoeff=0.4062;MQ=60.04;MQ0=2;MQRankSum=-2.064;QD=8.46;ReadPosRankSum=-0.882;VQSLOD=2.6956;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,1:39:58.42:0,58,1428	0/1:10,1:11:19.80:20,0,231	0/0:44,0:32:71.01:0,71,1108	0/0:37,0:23:48.63:0,49,765	0/0:23,0:23:60.18:0,60,969	0/0:26,1:27:30.75:0,31,998	0/0:34,0:34:68.75:0,69,1120	0/0:22,1:23:10.29:0,10,687	0/0:17,0:17:42.14:0,42,682	0/0:35,2:37:23.59:0,24,1444	0/0:16,0:16:39.13:0,39,647	0/0:30,0:30:75.19:0,75,1182	0/0:26,0:26:66.23:0,66,1093	0/0:29,0:29:66.23:0,66,1091	0/0:24,1:25:28.33:0,28,969	0/0:22,0:22:50.21:0,50,861	1/1:8,16:24:48.11:587,48,0	0/1:4,15:19:0.93:415,0,1	0/0:22,0:21:57.19:0,57,928	0/0:19,0:19:49.52:0,50,774	0/0:68,2:70:61:0,61,2551	0/1:15,1:16:1.72:2,0,512	0/0:19,0:18:51.15:0,51,791	0/1:39,5:44:65.90:66,0,1614	0/0:33,0:32:84.29:0,84,1374	0/0:35,0:35:93.31:0,93,1511	0/0:21,1:22:19.34:0,19,803	0/0:24,0:24:60.20:0,60,977
chr10	28464956	.	T	TC	8657.69	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-18.048;DP=621;FS=0.000;HRun=4;HaplotypeScore=76.1509;InbreedingCoeff=0.9967;MQ=76.88;MQ0=0;MQRankSum=-6.319;QD=33.56;ReadPosRankSum=2.118;VQSLOD=5.3894;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,26:30:75.25:1025,75,0	0/0:8,0:8:18.03:0,18,193	0/0:11,0:11:30.06:0,30,321	0/0:18,0:18:41.99:0,42,436	1/1:2,18:20:51.06:652,51,0	1/1:1,16:17:45.15:615,45,0	1/1:2,19:22:54.16:720,54,0	0/0:25,0:25:72.20:0,72,808	1/1:2,17:19:51.10:674,51,0	0/0:28,0:28:78.18:0,78,858	0/0:26,0:26:78.20:0,78,868	1/1:3,26:29:69.23:942,69,0	0/0:23,0:23:66.14:0,66,718	0/0:21,0:21:54.10:0,54,583	0/0:22,0:22:66.18:0,66,741	0/0:19,1:20:16.11:0,16,543	0/0:33,0:33:93.24:0,93,1042	0/0:23,0:23:66.16:0,66,736	1/1:5,14:19:42.11:557,42,0	1/1:0,12:12:33.11:447,33,0	1/1:5,62:67:99:2254,166,0	1/1:2,21:23:59.86:771,60,0	0/0:16,0:16:48.14:0,48,543	0/0:29,0:29:78.21:0,78,874	0/0:13,0:13:33.09:0,33,374	0/0:22,0:22:66.18:0,66,741	0/0:14,0:14:39.10:0,39,432	0/0:11,0:11:33.09:0,33,374
chr10	28465873	.	AT	A	517.53	PASS	AB=0.596;AC=2;AF=0.036;AN=56;BaseQRankSum=5.922;DP=507;FS=3.512;HRun=1;HaplotypeScore=54.3685;InbreedingCoeff=-0.0472;MQ=69.08;MQ0=2;MQRankSum=-4.042;QD=19.90;ReadPosRankSum=0.608;VQSLOD=3.8302;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:48.16:0,48,767	0/0:7,0:7:21.07:0,21,336	0/0:4,0:3:3:0,3,27	0/0:10,0:9:5.32:0,5,55	0/0:24,0:24:72.24:0,72,1142	0/0:17,0:17:51.17:0,51,815	0/0:9,0:9:27.09:0,27,432	0/0:30,0:30:87.29:0,87,1350	0/0:20,0:20:60.20:0,60,939	0/0:28,0:28:84.29:0,84,1334	0/0:17,0:17:51.16:0,51,791	0/0:29,0:29:87.27:0,87,1315	0/0:12,0:12:36.11:0,36,550	0/0:15,0:13:39.13:0,39,612	0/0:21,0:21:63.21:0,63,997	0/0:24,0:24:72.20:0,72,1072	0/1:7,11:18:53.64:417,0,54	0/1:2,6:8:64.01:189,0,64	0/0:20,0:20:60.20:0,60,950	0/0:30,0:30:90.31:0,90,1428	0/0:12,0:12:36.12:0,36,576	0/0:8,0:8:24.08:0,24,384	0/0:19,0:19:57.19:0,57,892	0/0:11,0:11:33.11:0,33,517	0/0:22,0:22:66.22:0,66,1036	0/0:26,0:26:78.27:0,78,1238	0/0:30,0:30:90.28:0,90,1394	0/0:20,0:20:57.16:0,57,884
chr10	28465897	.	C	CAATTGAG	618.64	PASS	AB=0.798;AC=2;AF=0.036;AN=56;BaseQRankSum=5.143;DP=548;FS=1.236;HRun=0;HaplotypeScore=126.6553;InbreedingCoeff=-0.0399;MQ=72.32;MQ0=3;MQRankSum=-5.239;QD=26.90;ReadPosRankSum=-2.211;VQSLOD=3.0890;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:57.17:0,57,1473	0/0:9,0:9:27.09:0,27,718	0/0:9,0:9:14.98:0,15,262	0/0:9,0:8:8.94:0,9,131	0/0:26,0:26:75.17:0,75,1925	0/0:16,0:16:48.16:0,48,1279	0/0:11,0:11:33.11:0,33,889	0/0:31,0:31:81.28:0,81,2132	0/0:20,0:20:60.18:0,60,1505	0/0:32,0:32:96.31:0,96,2462	0/0:21,0:21:60.19:0,60,1548	0/0:30,0:30:84.29:0,84,2237	0/0:19,0:19:54.19:0,54,1422	0/0:16,0:14:42.14:0,42,1119	0/0:24,0:24:72.23:0,72,1830	0/0:24,0:24:72.23:0,72,1872	0/1:11,6:15:99:591,0,123	0/1:5,1:6:83.34:117,0,83	0/0:26,0:26:78.21:0,78,1809	0/0:27,0:27:81.26:0,81,2058	0/0:9,0:9:27.09:0,27,689	0/0:14,0:14:42.13:0,42,1014	0/0:15,0:15:45.15:0,45,1142	0/0:10,0:10:27.09:0,27,715	0/0:23,0:23:66.17:0,66,1600	0/0:31,0:31:93.32:0,93,2467	0/0:33,0:33:99:0,99,2504	0/0:21,0:21:57.13:0,57,1264
chr10	28466393	.	CTCG	C	1489.34	PASS	AB=1.000;AC=30;AF=0.577;AN=52;BaseQRankSum=-4.805;DP=176;FS=3.680;HRun=0;HaplotypeScore=42.9241;InbreedingCoeff=0.2194;MQ=61.09;MQ0=0;MQRankSum=-1.700;QD=11.64;ReadPosRankSum=0.585;VQSLOD=2.6739;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,6:7:6.02:111,6,0	0/1:3,0:3:3.13:25,0,3	0/0:6,0:4:10.33:0,10,56	0/0:12,0:8:9.88:0,10,150	1/1:1,9:10:3.01:51,3,0	1/1:0,5:5:15.05:279,15,0	1/1:1,8:9:17.89:293,18,0	0/1:19,0:19:86.27:86,0,129	1/1:2,3:5:13.27:193,13,0	0/0:4,0:4:8.49:0,8,62	0/1:5,0:5:18.65:24,0,19	0/1:4,0:4:8.41:50,0,8	1/1:5,0:5:5.94:40,6,0	0/1:11,0:11:25.11:38,0,25	0/0:4,0:4:0.01:0,0,5	0/0:5,0:5:8.34:0,8,54	0/1:4,0:4:4.30:4,0,13	1/1:3,0:3:3.45:21,3,0	1/1:4,0:4:12.03:152,12,0	1/1:0,6:6:3.01:38,3,0	1/1:1,6:7:2.97:20,3,0	1/1:0,10:10:11.96:202,12,0	./.	./.	0/1:3,0:3:4.34:16,0,4	0/1:8,0:7:9.33:9,0,48	0/0:5,0:5:6.46:0,6,49	0/0:3,0:3:8.98:0,9,72
chr10	28466394	.	TCGC	T	1362	PASS	AB=0.909;AC=41;AF=0.854;AN=48;BaseQRankSum=-4.754;DP=171;FS=1.329;HRun=0;HaplotypeScore=44.2016;InbreedingCoeff=0.0305;MQ=61.35;MQ0=0;MQRankSum=-0.697;QD=9.46;ReadPosRankSum=0.596;VQSLOD=2.4492;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:7,0:7:10.84:67,0,11	1/1:3,0:3:8.39:84,8,0	0/1:6,0:4:7.14:7,0,25	0/0:11,0:7:3.41:0,3,96	1/1:10,0:10:3.01:46,3,0	1/1:5,0:5:15.05:179,15,0	1/1:9,0:9:15.05:179,15,0	0/1:3,16:19:58.79:134,0,59	1/1:5,0:5:11.06:114,11,0	1/1:3,0:3:1.70:9,2,0	1/1:5,0:5:3.01:47,3,0	1/1:4,0:4:3.01:37,3,0	1/1:5,0:5:6.02:82,6,0	1/1:11,0:11:14.12:140,14,0	1/1:4,0:4:8.16:48,8,0	1/1:5,0:5:0.89:8,1,0	1/1:4,0:4:2.69:9,3,0	1/1:3,0:3:1.82:5,2,0	1/1:4,0:4:8.90:60,9,0	1/1:6,0:6:2.97:20,3,0	./.	1/1:10,0:10:10.18:123,10,0	./.	./.	1/1:3,0:3:5.38:56,5,0	0/1:8,0:7:6.42:6,0,12	0/1:5,0:5:2.54:18,0,3	./.
chr10	28466395	.	CG	C	1188.94	PASS	AC=46;AF=0.920;AN=50;BaseQRankSum=-3.121;DP=154;FS=0.000;HRun=1;HaplotypeScore=37.2693;InbreedingCoeff=0.2969;MQ=63.67;MQ0=0;MQRankSum=-1.639;QD=9.01;ReadPosRankSum=2.067;VQSLOD=1.0554;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,0:7:5.93:40,6,0	1/1:3,0:3:7.79:46,8,0	0/0:6,0:4:5.84:0,6,34	0/0:8,0:6:3.90:0,4,89	1/1:10,0:10:3.01:33,3,0	1/1:5,0:5:14.84:102,15,0	1/1:9,0:9:17.85:127,18,0	1/1:18,0:18:3.34:210,3,0	1/1:3,1:4:11.91:103,12,0	1/1:1,2:3:5.69:48,6,0	1/1:5,0:5:3.63:13,4,0	1/1:2,2:4:3:27,3,0	1/1:2,0:2:5.23:44,5,0	1/1:7,3:10:12.06:69,12,0	1/1:1,3:4:6.48:70,6,0	1/1:4,0:4:2.44:6,2,0	1/1:1,0:1:2.60:10,3,0	1/1:0,1:1:3.01:42,3,0	1/1:0,3:3:9.03:125,9,0	1/1:6,0:6:1.55:4,2,0	1/1:7,0:7:2.97:20,3,0	1/1:10,0:10:8.44:61,8,0	./.	./.	1/1:3,0:3:3.07:11,3,0	1/1:4,4:7:6.15:79,6,0	1/1:5,0:5:1.77:3,2,0	./.
chr10	28466397	.	C	CT	1428.66	PASS	AB=1.000;AC=29;AF=0.580;AN=50;BaseQRankSum=-5.461;DP=146;FS=5.045;HRun=0;HaplotypeScore=34.4818;InbreedingCoeff=0.4203;MQ=61.32;MQ0=0;MQRankSum=1.186;QD=16.81;ReadPosRankSum=-0.128;VQSLOD=5.1120;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:6:0.28:0,0,15	1/1:0,3:3:9.03:141,9,0	0/0:4,0:3:2.98:0,3,22	0/0:6,0:4:2.68:0,3,57	1/1:10,0:10:3:26,3,0	0/0:5,0:5:5.87:0,6,14	0/0:8,0:8:4.37:0,4,10	0/1:18,0:18:6.23:358,0,6	0/0:4,0:4:2.57:0,3,6	1/1:2,1:3:5.75:60,6,0	1/1:0,5:5:6.02:94,6,0	0/0:4,0:4:4.77:0,5,22	1/1:0,2:2:6.02:84,6,0	1/1:3,7:10:17.65:240,18,0	1/1:3,1:4:8.89:97,9,0	1/1:0,4:4:6.02:95,6,0	1/1:0,1:1:3.01:48,3,0	1/1:1,0:1:2.50:9,2,0	0/1:3,0:3:0.94:1,0,4	0/1:6,0:6:0:0,0,0	0/0:7,0:7:0:0,0,0	0/0:10,0:10:3.25:0,3,21	./.	./.	1/1:1,2:3:6.02:96,6,0	1/1:6,2:7:13:122,13,0	1/1:0,4:4:6.02:96,6,0	./.
chr10	28467101	.	C	CGTGTGTGTGTGTGTGTGTGTGTGT	35232.53	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-1.785;DP=547;FS=7.884;HRun=0;HaplotypeScore=313.3171;InbreedingCoeff=0.6272;MQ=60.59;MQ0=3;MQRankSum=-5.577;QD=71.76;ReadPosRankSum=4.173;VQSLOD=2.6643;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:33,0:32:9.48:357,9,0	1/1:9,0:10:21.03:1552,21,0	0/0:31,0:22:21.27:0,21,668	0/0:25,0:16:18.06:0,18,514	1/1:10,0:9:3.01:273,3,0	1/1:19,0:18:18.06:851,18,0	1/1:25,0:23:18.06:1326,18,0	1/1:31,0:28:39.66:1244,40,0	1/1:18,0:18:33.11:2955,33,0	1/1:18,0:17:30.03:1876,30,0	1/1:12,0:12:2.95:75,3,0	1/1:23,0:23:18.53:994,19,0	1/1:26,3:28:48.16:3805,48,0	1/1:15,0:14:15.01:718,15,0	1/1:20,0:20:11.69:963,12,0	1/1:16,0:18:18.01:1405,18,0	1/1:26,0:25:39.13:2991,39,0	1/1:12,0:12:21.07:1782,21,0	1/1:11,0:11:21.07:1132,21,0	1/1:14,0:14:9.03:636,9,0	1/1:15,0:15:2.99:24,3,0	1/1:14,0:13:2.99:24,3,0	1/1:19,3:20:9.03:889,9,0	1/1:22,0:22:18.32:1394,18,0	1/1:15,3:21:12.04:1111,12,0	1/1:29,0:28:63.22:4511,63,0	1/1:15,0:14:15.05:1016,15,0	1/1:7,0:7:18.04:1331,18,0
chr10	28468233	.	G	GT	1119.66	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-6.390;DP=616;FS=12.598;HRun=6;HaplotypeScore=61.9209;InbreedingCoeff=0.9890;MQ=65.98;MQ0=5;MQRankSum=-1.023;QD=26.04;ReadPosRankSum=-0.691;VQSLOD=2.5339;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:87.09:0,87,869	0/0:7,0:7:18.04:0,18,183	0/0:32,0:22:16.95:0,17,404	0/0:33,0:23:43.12:0,43,441	0/0:21,0:21:54.12:0,54,550	0/0:29,0:29:78.18:0,78,795	0/0:13,0:13:39.09:0,39,398	0/0:25,0:25:69.16:0,69,704	0/0:15,0:15:42.09:0,42,429	0/0:44,0:44:99:0,111,1125	0/0:16,0:16:42.09:0,42,428	0/0:17,0:17:45.10:0,45,459	0/0:18,0:18:51.11:0,51,520	0/0:20,0:20:54.12:0,54,551	0/0:30,0:29:87.18:0,87,881	0/0:24,0:24:66.14:0,66,673	1/1:3,22:25:60.19:755,60,0	1/1:5,13:18:39.12:486,39,0	0/0:11,0:11:24.05:0,24,245	0/0:17,0:17:48.11:0,48,490	0/0:24,0:24:66.15:0,66,673	0/0:17,0:17:48.11:0,48,490	0/0:12,0:12:33.06:0,33,329	0/0:19,0:19:54.09:0,54,536	0/0:18,0:18:45.10:0,45,459	0/0:31,0:31:84.17:0,84,850	0/0:36,0:36:99:0,102,1033	0/0:10,0:10:30.07:0,30,306
chr10	28468528	.	T	TA	1686.86	PASS	AB=0.658;AC=18;AF=0.321;AN=56;BaseQRankSum=6.662;DP=313;FS=4.481;HRun=0;HaplotypeScore=39.2600;InbreedingCoeff=0.7289;MQ=62.02;MQ0=13;MQRankSum=3.321;QD=21.09;ReadPosRankSum=2.134;VQSLOD=4.7698;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,13:14:11.13:332,11,0	0/0:4,0:4:9.03:0,9,125	0/0:3,0:3:9.03:0,9,125	0/0:10,0:7:17.92:0,18,175	1/1:1,9:10:12.34:188,12,0	0/1:3,10:11:8.82:209,0,9	1/1:0,4:4:12.04:151,12,0	0/0:26,0:24:72.23:0,72,986	0/1:2,1:3:28.34:28,0,39	0/0:11,0:10:30.10:0,30,419	0/0:11,0:11:33.08:0,33,413	1/1:0,9:9:18.06:227,18,0	0/0:5,0:5:15.05:0,15,206	0/0:10,0:9:24.04:0,24,283	0/0:7,0:7:21.06:0,21,277	0/0:13,0:12:35.99:0,36,475	0/0:24,0:22:41.71:0,42,172	0/0:25,0:23:31.43:0,31,157	1/1:3,15:15:40.02:476,40,0	1/1:0,4:4:9.03:115,9,0	1/1:0,3:3:9.03:116,9,0	1/1:0,1:1:3.01:39,3,0	0/0:1,0:1:3.01:0,3,42	0/0:5,0:5:11.99:0,12,145	0/0:15,0:15:45.14:0,45,610	0/0:21,0:19:54.12:0,54,674	0/0:24,0:24:69.19:0,69,912	0/0:18,0:18:54.16:0,54,720
chr10	28468529	.	T	TA	3032.08	PASS	AB=0.857;AC=24;AF=0.429;AN=56;BaseQRankSum=5.554;DP=309;FS=0.000;HRun=2;HaplotypeScore=32.9174;InbreedingCoeff=0.7698;MQ=60.28;MQ0=13;MQRankSum=1.194;QD=22.29;ReadPosRankSum=2.185;VQSLOD=3.4211;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:14:24.79:366,25,0	0/0:3,0:3:6.02:0,6,74	0/0:3,0:3:9.02:0,9,104	0/0:9,0:6:14.37:0,14,113	1/1:10,0:10:15.05:194,15,0	1/1:12,0:10:18.06:233,18,0	1/1:5,0:5:12.04:157,12,0	0/0:26,0:24:69.20:0,69,836	0/1:3,0:3:10.10:31,0,10	0/0:11,0:10:30.09:0,30,370	0/0:10,0:10:30.06:0,30,336	1/1:9,0:9:18.06:235,18,0	0/0:5,0:5:15.04:0,15,174	0/0:8,0:7:18.03:0,18,199	0/0:7,0:7:21.06:0,21,248	0/0:13,0:12:35.99:0,36,409	1/1:3,21:22:54.18:733,54,0	1/1:11,14:23:41.82:460,42,0	1/1:19,0:16:48.05:556,48,0	1/1:4,0:4:9.03:117,9,0	1/1:3,0:3:9.03:116,9,0	1/1:2,0:2:3.01:39,3,0	0/0:1,0:1:3.01:0,3,37	0/1:3,2:5:6.94:7,0,99	0/0:15,0:15:42.13:0,42,517	0/0:21,0:19:57.04:0,57,620	0/0:23,0:23:69.16:0,69,801	0/0:18,0:18:54.14:0,54,630
chr10	28468784	.	AT	A	10439.56	PASS	AB=0.600;AC=51;AF=0.911;AN=56;BaseQRankSum=-1.574;DP=551;FS=5.235;HRun=10;HaplotypeScore=57.1404;InbreedingCoeff=0.5964;MQ=68.19;MQ0=1;MQRankSum=-5.302;QD=19.88;ReadPosRankSum=3.788;VQSLOD=5.8639;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,24:24:62.99:547,63,0	1/1:1,8:9:20.99:182,21,0	0/0:12,1:13:0.38:0,0,215	0/0:12,0:12:7.02:0,7,199	1/1:1,26:27:70.25:575,70,0	1/1:2,17:19:32.99:286,33,0	0/1:3,6:9:12.17:135,0,12	1/1:5,25:30:71.96:623,72,0	1/1:3,20:23:44.99:391,45,0	1/1:3,19:22:53.95:463,54,0	1/1:1,9:10:26.99:234,27,0	1/1:5,20:25:20.80:410,21,0	1/1:2,25:27:55.56:604,56,0	1/1:3,22:26:52.85:449,53,0	1/1:2,32:34:74.98:651,75,0	1/1:1,21:22:41.99:365,42,0	1/1:0,14:14:35.99:313,36,0	1/1:1,13:14:32.99:287,33,0	1/1:4,18:23:55.97:469,56,0	1/1:2,19:21:56.98:495,57,0	1/1:2,17:19:35.99:313,36,0	1/1:3,19:22:50.97:443,51,0	1/1:0,15:15:38.99:339,39,0	1/1:0,12:12:35.99:313,36,0	1/1:3,13:16:32.97:287,33,0	1/1:1,18:19:50.99:443,51,0	1/1:4,27:31:68.94:592,69,0	1/1:0,11:11:26.99:234,27,0
chr10	28469613	.	GCAGATAGATAGATAGATAGATAGA	G	6174.09	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=4.592;DP=737;FS=0.349;HRun=0;HaplotypeScore=345.9418;InbreedingCoeff=0.9231;MQ=55.04;MQ0=24;MQRankSum=2.290;QD=25.62;ReadPosRankSum=1.076;VQSLOD=2.4617;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:17:32.89:451,33,0	0/0:14,0:13:32.39:0,32,408	0/0:47,0:11:25.09:0,25,212	0/0:43,0:18:38.28:0,38,378	1/1:4,29:32:35.78:469,36,0	1/1:14,0:14:39.01:481,39,0	1/1:16,0:15:32.93:333,33,0	0/0:42,0:38:99:0,114,1498	1/1:32,0:30:86.79:1241,87,0	0/0:26,0:24:72.16:0,72,1259	0/0:27,0:27:44.60:0,45,661	1/1:22,0:22:63.09:1102,63,0	0/0:28,0:28:57.07:0,57,909	0/0:24,0:20:49.83:0,50,657	0/0:37,0:36:72.47:0,72,876	0/0:35,0:35:63:0,63,1139	0/0:18,0:18:39.01:0,39,1107	0/1:14,0:13:42.34:42,0,635	1/1:8,7:14:38.91:604,39,0	1/1:10,25:35:56.73:732,57,0	1/1:14,0:12:32.98:432,33,0	1/1:12,13:25:35.86:288,36,0	0/0:18,0:18:35.99:0,36,420	0/0:17,0:17:24.75:0,25,311	0/0:40,0:39:78.12:0,78,1270	0/0:28,0:25:65.02:0,65,906	0/0:34,0:32:60.75:0,61,742	0/0:18,0:18:46.04:0,46,582
chr10	28469614	.	C	CAGAT	888.71	PASS	AB=0.842;AC=23;AF=0.575;AN=40;BaseQRankSum=0.306;DP=742;FS=6.990;HRun=0;HaplotypeScore=160.8610;InbreedingCoeff=0.3392;MQ=54.44;MQ0=26;MQRankSum=-2.458;QD=2.48;ReadPosRankSum=-1.651;VQSLOD=1.6546;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:18:3.44:29,3,0	1/1:12,0:11:9.03:190,9,0	./.	./.	./.	./.	0/0:16,0:15:2.74:0,3,12	./.	./.	0/1:25,2:25:30.05:251,0,30	0/1:19,9:28:0:0,0,0	1/1:20,0:20:2.99:23,3,0	1/1:20,9:30:3.01:38,3,0	1/1:24,1:21:9.03:187,9,0	0/1:26,11:36:0:0,0,0	0/0:25,0:34:0.89:0,1,2	0/0:19,0:19:18.53:0,19,265	0/0:15,0:14:15.03:0,15,198	1/1:16,0:14:3.01:31,3,0	./.	0/1:16,0:13:0:0,0,0	./.	0/0:11,0:17:3:0,3,28	0/0:10,0:16:4.03:0,4,13	0/1:28,12:41:18.08:63,0,18	1/1:28,0:25:14.50:90,15,0	1/1:35,0:33:3.01:69,3,0	1/1:20,0:19:4.41:41,4,0
chr10	28469672	.	GATGA	G	590.40	PASS	AB=0.965;AC=9;AF=0.173;AN=52;BaseQRankSum=6.256;DP=652;FS=2.081;HRun=0;HaplotypeScore=179.6577;InbreedingCoeff=-0.1732;MQ=46.85;MQ0=40;MQRankSum=-1.927;QD=2.57;ReadPosRankSum=0.010;VQSLOD=2.5043;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:21:60.01:125,0,60	0/1:16,0:14:65.60:66,0,354	./.	./.	0/1:34,3:35:56.20:107,0,56	0/0:14,0:13:30.43:0,30,443	0/0:20,0:15:21.43:0,21,226	0/0:48,0:40:99:0,110,1309	0/0:18,0:14:30.99:0,31,512	0/1:24,0:21:24.38:24,0,545	0/0:22,0:21:13.48:0,13,177	0/1:19,0:19:7.28:7,0,618	0/0:27,0:27:36.89:0,37,547	0/1:28,0:25:55.14:55,0,480	0/0:27,0:24:27.09:0,27,444	0/0:26,0:26:14.94:0,15,668	0/0:24,0:21:29.56:0,30,344	0/1:22,0:17:79.74:80,0,257	0/0:20,0:18:4.86:0,5,421	0/0:29,0:29:27.04:0,27,405	0/0:9,0:5:0.47:0,0,1	0/0:27,0:25:36.10:0,36,586	0/0:22,0:21:22.89:0,23,360	0/0:17,0:16:19.46:0,19,208	0/0:36,0:35:27.81:0,28,705	0/1:21,10:25:99:164,0,594	0/0:25,11:33:8.73:0,9,453	0/1:26,0:23:95.80:96,0,548
chr10	28469722	.	T	TAGAC	784.58	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=1.241;DP=615;FS=19.063;HRun=0;HaplotypeScore=137.8319;InbreedingCoeff=0.4360;MQ=53.17;MQ0=27;MQRankSum=-1.244;QD=7.13;ReadPosRankSum=0.945;VQSLOD=1.4433;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:18:53.58:54,0,64	0/0:14,0:13:36.02:0,36,347	0/0:6,0:3:9:0,9,84	0/0:5,0:3:5.96:0,6,58	0/1:24,0:23:99:277,0,138	0/0:25,0:25:63.04:0,63,791	0/0:16,0:15:30:0,30,329	0/0:47,0:39:83.70:0,84,718	0/0:21,0:20:60.06:0,60,803	0/1:22,0:21:4.48:4,0,306	0/0:20,0:19:41.55:0,42,373	0/0:23,0:23:63.11:0,63,898	0/0:22,0:22:56.98:0,57,528	0/0:21,0:21:53.82:0,54,513	0/0:26,0:25:68.99:0,69,641	0/0:36,0:36:89.29:0,89,813	1/1:4,17:20:6.02:149,6,0	1/1:18,3:18:35.68:431,36,0	0/0:18,0:16:40.22:0,40,493	0/0:19,0:19:44.94:0,45,602	0/0:4,0:4:6:0,6,58	0/0:15,0:15:45.10:0,45,706	0/0:27,0:26:56.70:0,57,531	0/0:12,0:12:13.90:0,14,122	0/0:28,0:28:62.25:0,62,561	0/0:25,0:22:30.94:0,31,389	0/0:40,0:38:95.07:0,95,803	0/0:35,0:33:82.55:0,83,707
chr10	28470764	.	CTGGGT	C	1310.50	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.987;DP=582;FS=10.994;HRun=0;HaplotypeScore=104.4242;InbreedingCoeff=0.9991;MQ=85.24;MQ0=0;MQRankSum=-4.038;QD=48.54;ReadPosRankSum=1.960;VQSLOD=3.5836;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:62.95:0,63,1871	0/0:9,0:9:27.09:0,27,857	0/0:20,0:20:51.16:0,51,1502	0/0:17,0:17:44.93:0,45,1206	0/0:25,0:25:72.25:0,72,2267	0/0:30,0:30:84.28:0,84,2503	0/0:16,0:16:48.16:0,48,1480	0/0:26,0:26:72.25:0,72,2272	0/0:14,0:14:42.12:0,42,1145	0/0:21,0:21:63.22:0,63,1981	0/0:28,0:28:78.25:0,78,2398	0/0:23,0:23:66.23:0,66,2071	0/0:31,0:31:90.30:0,90,2731	0/0:17,0:17:51.18:0,51,1618	0/0:17,0:17:51.18:0,51,1575	0/0:17,0:17:51.16:0,51,1544	1/1:0,15:15:36.12:781,36,0	1/1:0,12:12:30.10:651,30,0	0/0:21,0:21:54.15:0,54,1472	0/0:29,0:29:87.28:0,87,2651	0/0:21,0:21:60.21:0,60,1901	0/0:22,0:22:66.17:0,66,1948	0/0:20,0:20:60.21:0,60,1884	0/0:19,0:19:54.19:0,54,1689	0/0:20,0:20:57.20:0,57,1788	0/0:25,0:25:72.25:0,72,2268	0/0:28,0:28:78.26:0,78,2368	0/0:17,0:17:51.18:0,51,1566
chr10	28471343	.	G	GA	4276.25	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=19.769;DP=740;FS=15.939;HRun=3;HaplotypeScore=116.5026;InbreedingCoeff=0.9996;MQ=79.53;MQ0=0;MQRankSum=-3.229;QD=17.04;ReadPosRankSum=1.442;VQSLOD=3.6825;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:26,1:27:63.59:396,64,0	0/0:13,0:13:39.12:0,39,468	0/0:32,0:32:65.82:0,66,687	0/0:15,0:15:41.08:0,41,429	1/1:21,2:23:56.08:399,56,0	1/1:31,1:32:81.50:571,81,0	1/1:25,0:25:58.01:364,58,0	0/0:41,0:41:99:0,111,1310	1/1:23,2:25:67.91:509,68,0	0/0:29,0:29:81.25:0,81,972	0/0:24,0:24:69.21:0,69,828	1/1:26,1:27:70.22:522,70,0	0/0:32,0:32:87.25:0,87,1032	0/0:25,0:25:75.21:0,75,886	0/0:38,0:38:99:0,102,1224	0/0:28,0:28:62.44:0,62,905	0/0:39,0:39:99:0,108,1294	0/0:19,0:19:51.16:0,51,612	1/1:26,2:28:69.06:524,69,0	1/1:25,2:27:67.32:472,67,0	1/1:21,3:24:48.27:348,48,0	1/1:13,0:13:23.21:172,23,0	0/0:30,0:30:84.26:0,84,1008	0/0:27,0:27:75.23:0,75,900	0/0:26,0:26:78.24:0,78,936	0/0:28,0:28:78.23:0,78,927	0/0:32,0:32:87.27:0,87,1043	0/0:11,0:11:33.10:0,33,396
chr10	28471355	.	GA	G	2823.69	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=17.450;DP=735;FS=1.770;HRun=6;HaplotypeScore=121.3571;InbreedingCoeff=0.9995;MQ=78.07;MQ0=0;MQRankSum=-2.006;QD=11.39;ReadPosRankSum=3.351;VQSLOD=1.5708;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:27,1:28:54.80:353,55,0	0/0:14,0:14:42.14:0,42,548	0/0:31,0:30:69.73:0,70,762	0/0:16,0:15:29.08:0,29,352	1/1:24,1:25:60.45:341,60,0	1/1:32,1:33:68.02:405,68,0	1/1:22,1:23:40.56:265,41,0	0/0:40,0:40:99:0,105,1338	1/1:24,1:25:47.78:295,48,0	0/0:23,0:23:60.19:0,60,774	0/0:23,0:23:66.21:0,66,858	1/1:25,0:25:60.50:353,61,0	0/0:30,0:30:87.25:0,87,1095	0/0:26,0:26:69.21:0,69,871	0/0:40,0:40:99:0,108,1386	0/0:31,0:31:75.03:0,75,1047	0/0:35,0:35:99:0,102,1304	0/0:20,0:20:54.17:0,54,701	1/1:24,1:25:55.58:351,56,0	1/1:26,0:26:39.59:224,40,0	1/1:21,1:22:39.18:263,39,0	1/1:14,2:16:23.04:194,23,0	0/0:30,0:30:78.24:0,78,1002	0/0:33,0:33:93.26:0,93,1160	0/0:28,0:28:75.23:0,75,965	0/0:23,0:23:60.17:0,60,748	0/0:32,0:32:96.27:0,96,1200	0/0:12,0:12:36.12:0,36,470
chr10	28472340	.	C	CTGGT	36697.09	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-6.068;DP=787;FS=15.137;HRun=0;HaplotypeScore=125.0736;InbreedingCoeff=0.9946;MQ=70.82;MQ0=2;MQRankSum=-5.371;QD=50.34;ReadPosRankSum=5.629;VQSLOD=4.7219;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,33:43:90.17:2130,90,0	1/1:3,10:15:27.09:668,27,0	0/0:32,0:29:51.14:0,51,802	0/0:25,0:24:33.07:0,33,552	1/1:10,14:23:45.15:1087,45,0	1/1:9,15:24:51.17:1242,51,0	1/1:11,19:31:60.21:1482,60,0	1/1:11,11:22:42.13:989,42,0	1/1:10,20:31:60.21:1483,60,0	1/1:9,23:32:78.27:1823,78,0	1/1:5,14:21:42.14:1030,42,0	1/1:9,23:32:75.26:1831,75,0	1/1:9,21:31:66.23:1601,66,0	1/1:5,14:19:39.13:961,39,0	1/1:11,32:47:96.33:2355,96,0	1/1:3,23:27:72.25:1729,72,0	1/1:11,21:30:51.17:1262,51,0	1/1:7,10:17:30.10:742,30,0	1/1:14,5:19:30.10:705,30,0	1/1:10,29:39:87.29:2124,87,0	1/1:18,20:37:63.22:1512,63,0	1/1:3,19:22:57.20:1410,57,0	1/1:1,17:21:39:944,39,0	1/1:5,35:40:96.33:2375,96,0	1/1:7,18:25:60.16:1430,60,0	1/1:11,21:32:66.22:1565,66,0	1/1:12,21:35:72.25:1771,72,0	1/1:2,8:10:18.06:446,18,0
chr10	28472424	.	C	CT	4397.41	PASS	AB=0.667;AC=22;AF=0.393;AN=56;BaseQRankSum=3.289;DP=585;FS=15.047;HRun=0;HaplotypeScore=171.6240;InbreedingCoeff=0.3502;MQ=51.06;MQ0=8;MQRankSum=-2.507;QD=14.32;ReadPosRankSum=6.946;VQSLOD=4.7161;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,21:24:17.87:258,18,0	0/0:8,0:10:1.59:0,2,70	0/0:23,0:16:48.16:0,48,663	0/0:24,0:14:42.13:0,42,560	0/1:3,15:18:3.29:311,0,3	1/1:1,13:14:14.70:182,15,0	1/1:8,25:37:71.83:1007,72,0	0/0:24,0:22:65.32:0,65,471	1/1:2,12:16:39.08:511,39,0	0/0:20,0:23:1.04:0,1,284	0/0:15,0:17:9.84:0,10,209	1/1:5,14:19:27.35:629,27,0	0/1:15,0:20:21.44:21,0,115	0/1:16,0:21:1.92:2,0,86	0/0:22,0:31:34.54:0,35,348	0/0:15,0:19:6.77:0,7,162	0/0:13,0:15:12.90:0,13,131	0/0:18,0:19:26.01:0,26,265	0/1:5,10:15:23.26:434,0,23	1/1:4,14:18:21.02:314,21,0	1/1:12,16:29:7.28:635,7,0	0/1:2,0:17:8.46:8,0,32	0/0:16,0:18:8.25:0,8,140	0/1:17,0:25:38.81:39,0,117	0/1:12,0:17:7.42:7,0,95	0/0:23,0:25:24.07:0,24,359	0/0:18,0:27:2.09:0,2,333	0/1:2,0:13:11.11:37,0,11
chr10	28472426	.	C	CAG	2933.05	PASS	AB=0.984;AC=28;AF=0.500;AN=56;BaseQRankSum=4.439;DP=597;FS=35.976;HRun=0;HaplotypeScore=182.0470;InbreedingCoeff=0.0209;MQ=51.07;MQ0=9;MQRankSum=-0.671;QD=6.45;ReadPosRankSum=4.713;VQSLOD=1.4391;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,7:25:20.29:186,20,0	0/0:9,0:9:7.06:0,7,88	0/0:25,0:16:48.04:0,48,469	0/0:26,0:14:42.06:0,42,420	1/1:15,4:18:17.54:164,18,0	1/1:12,3:15:15.44:153,15,0	0/1:32,6:38:2.73:373,0,3	0/0:24,0:22:15.37:0,15,119	1/1:12,6:18:10.36:344,10,0	0/0:24,0:23:18.90:0,19,259	0/1:16,0:16:3.66:4,0,89	1/1:16,6:23:38.25:480,38,0	0/1:19,0:18:26.62:91,0,27	0/1:21,0:21:74.62:111,0,75	0/1:32,0:32:71.13:71,0,285	0/1:19,0:19:54.64:69,0,55	0/0:16,0:14:1.85:0,2,19	0/1:17,0:17:8.06:8,0,34	1/1:14,2:16:3.60:251,4,0	1/1:11,7:18:17.78:152,18,0	0/1:29,3:31:3.28:364,0,3	0/0:18,0:18:7.27:0,7,28	0/1:17,0:17:9.09:9,0,33	0/1:24,0:24:48.10:48,0,69	0/1:18,0:18:16.97:32,0,17	0/1:27,0:27:76:87,0,76	0/1:26,0:26:99:108,0,120	0/1:13,0:13:4.55:5,0,17
chr10	28475861	.	T	TG	223.16	PASS	AB=0.948;AC=21;AF=0.375;AN=56;BaseQRankSum=2.337;DP=385;FS=1.046;HRun=12;HaplotypeScore=178.4746;InbreedingCoeff=0.3144;MQ=65.31;MQ0=0;MQRankSum=-1.790;QD=1.12;ReadPosRankSum=-3.253;VQSLOD=-0.1479;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:11,3:14:0:0,0,0	0/1:6,0:6:0:0,0,0	0/0:12,0:11:6.50:0,6,29	0/0:12,0:11:2.92:0,3,22	0/0:18,0:18:2.75:0,3,20	0/0:13,0:14:2.01:0,2,6	0/0:15,0:19:13.90:0,14,93	1/1:16,0:16:2.97:20,3,0	0/0:12,0:12:2.14:0,2,19	0/1:15,1:17:0:0,0,0	0/0:11,0:11:2.97:0,3,22	0/0:18,0:18:2.69:0,3,22	1/1:8,2:10:5.50:38,6,0	1/1:16,2:18:6.48:59,6,0	1/1:15,0:16:1.79:25,2,0	0/1:20,2:22:22.87:100,0,23	0/0:19,0:19:41.71:0,42,304	0/0:9,0:9:23.85:0,24,175	0/0:8,0:10:6.37:0,6,29	0/0:9,0:10:4.93:0,5,26	0/0:8,0:8:2.91:0,3,22	0/0:13,1:14:1.95:0,2,6	1/1:8,0:8:0.47:1,0,0	1/1:17,1:18:2.96:23,3,0	1/1:12,1:13:3:29,3,0	0/1:11,0:11:0:0,0,0	0/1:18,1:19:27.35:57,0,27	0/1:11,0:11:0:0,0,0
chr10	28475901	.	TG	T	8058.49	PASS	AB=0.915;AC=35;AF=0.625;AN=56;BaseQRankSum=-6.486;DP=404;FS=1.808;HRun=1;HaplotypeScore=238.9003;InbreedingCoeff=0.4238;MQ=55.55;MQ0=0;MQRankSum=-2.009;QD=27.60;ReadPosRankSum=-1.759;VQSLOD=3.8727;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:17,0:17:26.65:27,0,129	1/1:0,4:4:12.04:166,12,0	0/1:6,1:6:8.98:20,0,9	0/0:7,0:7:10.78:0,11,48	0/0:29,0:29:16.62:0,17,284	0/0:12,0:12:5.01:0,5,111	0/1:13,0:13:8.85:9,0,140	1/1:0,26:26:78.25:1067,78,0	0/0:16,0:16:9.35:0,9,128	1/1:0,23:23:66.17:872,66,0	1/1:0,15:15:42.05:533,42,0	0/0:14,0:14:37.09:0,37,211	1/1:1,7:8:20.87:242,21,0	1/1:0,13:13:39.08:512,39,0	1/1:1,14:15:45.10:584,45,0	1/1:2,21:23:66.19:868,66,0	0/0:12,0:12:4.16:0,4,117	0/1:6,0:6:23.67:24,0,36	0/0:22,0:22:54.22:0,54,280	0/1:24,0:24:41.14:41,0,167	0/1:8,0:8:11.56:12,0,46	1/1:1,10:11:33.03:408,33,0	1/1:2,7:9:27.05:306,27,0	1/1:2,10:12:30.02:346,30,0	1/1:0,18:18:48.16:652,48,0	1/1:2,10:12:36.11:471,36,0	1/1:1,18:19:57.15:748,57,0	0/1:1,8:9:21.45:151,0,21
chr10	28475923	.	TC	T	3084.78	PASS	AB=0.861;AC=50;AF=0.893;AN=56;BaseQRankSum=1.440;DP=362;FS=6.174;HRun=3;HaplotypeScore=272.0807;InbreedingCoeff=0.3996;MQ=45.56;MQ0=0;MQRankSum=-1.986;QD=8.76;ReadPosRankSum=2.418;VQSLOD=0.9277;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:15:21.71:75,22,0	1/1:2,3:5:9.02:92,9,0	0/0:5,0:4:3.99:0,4,72	0/0:5,0:4:2.37:0,2,8	1/1:25,0:25:30.76:106,31,0	1/1:11,0:11:22.52:84,23,0	1/1:12,0:12:10.16:37,10,0	0/1:23,0:23:0:0,0,0	1/1:16,0:16:24.26:83,24,0	1/1:12,7:19:21.05:228,21,0	1/1:8,6:14:18:174,18,0	1/1:14,0:14:14.75:52,15,0	1/1:4,2:6:6.01:63,6,0	0/1:8,5:13:15.41:137,0,15	1/1:9,5:14:15.04:157,15,0	1/1:15,6:21:23.35:215,23,0	1/1:10,2:12:6.01:64,6,0	1/1:4,2:6:6.01:64,6,0	1/1:18,0:18:10.38:39,10,0	1/1:23,0:23:44.24:154,44,0	1/1:2,0:2:2.50:9,2,0	1/1:5,3:8:9.02:95,9,0	1/1:6,4:10:15.04:160,15,0	1/1:4,6:10:17.99:176,18,0	1/1:7,8:15:29.33:273,29,0	1/1:10,7:17:7.79:212,8,0	1/1:8,12:20:36.09:382,36,0	1/1:1,2:3:6.01:63,6,0
chr10	28475927	.	TGC	T	4605.20	PASS	AB=1.000;AC=50;AF=0.926;AN=54;BaseQRankSum=0.490;DP=174;FS=1.868;HRun=0;HaplotypeScore=199.8945;InbreedingCoeff=0.3232;MQ=51.81;MQ0=0;MQRankSum=-1.250;QD=26.93;ReadPosRankSum=1.355;VQSLOD=5.7705;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,9:9:27.09:395,27,0	1/1:3,0:3:8.65:47,9,0	0/1:5,0:4:2.19:2,0,46	0/0:3,0:2:3.01:0,3,51	1/1:0,15:15:39.13:570,39,0	1/1:0,9:9:27.09:384,27,0	1/1:0,3:4:12.01:153,12,0	./.	1/1:0,11:11:30.10:440,30,0	1/1:7,0:7:20.37:114,20,0	1/1:7,0:7:17.34:95,17,0	1/1:0,6:6:18.06:263,18,0	1/1:2,0:2:5.75:30,6,0	0/1:7,0:7:1.48:56,0,1	1/1:5,0:5:14.40:78,14,0	1/1:7,1:8:23.22:152,23,0	1/1:2,0:2:5.78:30,6,0	1/1:2,0:2:5.83:34,6,0	1/1:0,4:4:12.04:176,12,0	1/1:0,18:18:54.18:791,54,0	1/1:0,1:1:3.01:44,3,0	1/1:3,0:3:8.63:46,9,0	1/1:5,0:5:14.14:71,14,0	1/1:6,0:6:17.34:112,17,0	1/1:8,2:10:28.99:207,29,0	1/1:8,0:8:12.34:94,12,0	1/1:12,0:12:34.68:188,35,0	1/1:2,0:2:5.81:32,6,0
chr10	28477579	.	GA	G	4154.27	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-4.976;DP=520;FS=0.000;HRun=9;HaplotypeScore=67.1881;InbreedingCoeff=0.9796;MQ=78.16;MQ0=0;MQRankSum=-3.002;QD=21.86;ReadPosRankSum=2.003;VQSLOD=4.4884;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,22:26:63.02:577,63,0	0/0:8,0:8:21.06:0,21,242	0/0:25,0:23:25.90:0,26,476	0/0:17,0:17:18.17:0,18,225	1/1:3,13:16:39.02:357,39,0	1/1:4,21:25:60.03:549,60,0	1/1:1,12:13:30.01:275,30,0	0/0:27,0:27:66.19:0,66,753	1/1:3,16:19:45.02:412,45,0	0/0:15,0:15:45.13:0,45,518	0/0:14,0:14:39.10:0,39,440	1/1:3,16:19:45.02:412,45,0	0/0:11,0:11:33.10:0,33,380	0/0:11,1:12:5.65:0,6,318	0/0:26,0:27:72.05:0,72,810	0/0:20,0:20:54.14:0,54,603	0/0:25,0:25:66.20:0,66,762	0/0:17,0:17:45.11:0,45,506	1/1:4,22:26:66.03:604,66,0	1/1:3,23:27:49.58:613,50,0	1/1:4,15:19:39.02:357,39,0	0/0:16,0:16:48.13:0,48,545	0/0:13,0:13:30.09:0,30,346	0/0:18,0:18:48.14:0,48,554	0/0:13,0:13:33.09:0,33,372	0/0:14,0:14:42.08:0,42,463	0/0:31,0:31:78.21:0,78,881	0/0:7,0:7:21.06:0,21,242
chr10	28477801	.	CAT	C	2594.14	PASS	AB=1.000;AC=39;AF=0.813;AN=48;BaseQRankSum=-7.216;DP=313;FS=3.980;HRun=0;HaplotypeScore=51.0107;InbreedingCoeff=0.5396;MQ=80.99;MQ0=17;MQRankSum=1.169;QD=17.29;ReadPosRankSum=0.347;VQSLOD=3.3027;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,0:4:8.52:42,9,0	1/1:1,3:4:9.03:114,9,0	0/0:36,0:10:2.25:0,2,24	0/0:82,0:28:22.10:0,22,225	1/1:0,0:6:8.52:42,9,0	1/1:1,0:13:19.89:97,20,0	1/1:0,0:2:2.84:14,3,0	1/1:12,26:38:78.21:940,78,0	1/1:1,0:4:2.84:14,3,0	1/1:2,7:9:21.07:265,21,0	1/1:1,3:4:6.02:76,6,0	1/1:2,0:3:5.68:28,6,0	1/1:3,6:9:12.04:151,12,0	1/1:0,1:1:3.01:38,3,0	1/1:1,3:4:9.03:114,9,0	1/1:0,2:2:6.02:76,6,0	0/0:2,0:24:30.02:0,30,266	0/0:0,0:15:26.99:0,27,234	1/1:2,0:11:5.58:61,6,0	1/1:0,0:3:8.52:42,9,0	./.	./.	./.	./.	1/1:3,6:9:15.05:189,15,0	1/1:4,6:10:18.06:227,18,0	1/1:3,5:8:12.04:151,12,0	0/1:5,0:5:29.63:64,0,30
chr10	28478381	.	T	TG	8814.15	PASS	AB=0.533;AC=17;AF=0.304;AN=56;BaseQRankSum=18.273;DP=740;FS=5.075;HRun=1;HaplotypeScore=86.4373;InbreedingCoeff=0.9155;MQ=84.36;MQ0=0;MQRankSum=-3.104;QD=37.83;ReadPosRankSum=1.599;VQSLOD=5.3880;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,36:36:87.29:1302,87,0	0/0:18,0:18:54.14:0,54,677	0/0:24,0:24:63.20:0,63,812	0/0:27,0:27:69.06:0,69,834	1/1:1,25:26:69.23:1033,69,0	1/1:0,23:23:66.22:986,66,0	1/1:0,31:31:87.29:1299,87,0	0/0:39,0:39:99:0,114,1463	0/1:3,21:24:50.62:777,0,51	0/0:34,0:34:99:0,102,1325	0/0:21,0:21:57.18:0,57,735	1/1:1,20:21:47.59:707,48,0	0/0:22,0:22:66.21:0,66,856	0/0:28,0:28:81.26:0,81,1052	0/0:36,0:36:99:0,105,1363	0/0:35,1:36:57.38:0,57,1240	0/0:28,0:28:78.25:0,78,1012	0/0:30,0:30:87.28:0,87,1130	1/1:6,17:23:31.55:738,32,0	1/1:1,21:22:60.20:897,60,0	1/1:2,25:27:72.24:1076,72,0	0/0:23,0:23:69.20:0,69,876	0/0:19,0:19:57.17:0,57,725	0/0:31,0:31:90.28:0,90,1154	0/0:17,0:17:48.13:0,48,606	0/0:32,0:32:90.29:0,90,1167	0/0:24,0:24:69.21:0,69,878	0/0:18,0:18:51.17:0,51,662
chr10	28479976	.	G	GA	5795.96	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-12.062;DP=630;FS=3.407;HRun=8;HaplotypeScore=63.3549;InbreedingCoeff=0.9853;MQ=77.70;MQ0=1;MQRankSum=0.845;QD=26.96;ReadPosRankSum=0.144;VQSLOD=5.5633;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,18:23:46.02:519,46,0	0/0:11,0:11:33.02:0,33,302	0/0:25,0:22:18.62:0,19,231	0/0:21,0:20:28.37:0,28,297	1/1:3,33:38:99:1134,102,0	1/1:3,21:23:53.95:602,54,0	1/1:1,18:19:42.12:485,42,0	0/0:34,0:34:93.02:0,93,838	1/1:3,14:17:36.11:415,36,0	0/0:26,0:26:66.01:0,66,596	0/0:33,0:32:93.03:0,93,846	1/1:2,23:25:60.18:692,60,0	0/0:20,0:20:54.02:0,54,494	0/0:15,0:15:42.01:0,42,379	0/0:18,0:19:44.04:0,44,385	0/0:19,0:19:7.38:0,7,316	0/0:26,0:26:68.97:0,69,621	0/0:15,0:15:42:0,42,379	1/1:5,26:31:81.14:894,81,0	1/1:3,24:27:69.17:778,69,0	1/1:3,8:11:24.07:277,24,0	0/0:22,0:22:35.57:0,36,485	0/0:24,1:25:28.41:0,28,514	0/0:10,0:9:23.97:0,24,211	0/0:17,0:17:45.02:0,45,412	0/0:27,0:27:69.02:0,69,632	0/0:36,0:36:87.03:0,87,795	0/0:14,0:14:41.97:0,42,371
chr10	28481054	.	TC	T	6996.28	PASS	AB=0.814;AC=53;AF=0.946;AN=56;BaseQRankSum=3.286;DP=476;FS=14.538;HRun=1;HaplotypeScore=319.8009;InbreedingCoeff=-0.0605;MQ=71.48;MQ0=0;MQRankSum=-2.994;QD=14.70;ReadPosRankSum=6.192;VQSLOD=1.9313;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,30:30:63.87:436,64,0	1/1:0,11:11:32.35:198,32,0	0/1:11,0:12:32.69:38,0,33	0/1:20,0:20:12.75:77,0,13	1/1:0,23:23:29.62:249,30,0	1/1:1,14:15:43.56:253,44,0	1/1:0,17:17:46.84:272,47,0	1/1:0,18:18:48.88:323,49,0	1/1:0,20:20:57.83:333,58,0	1/1:0,21:21:61:395,61,0	0/1:1,12:13:12.54:108,0,13	1/1:0,23:23:63.86:362,64,0	1/1:0,32:32:85.01:475,85,0	1/1:0,14:14:40.76:232,41,0	1/1:0,24:24:54.30:376,54,0	1/1:0,12:12:35.25:214,35,0	1/1:0,16:16:46.93:281,47,0	1/1:0,8:8:23.78:163,24,0	1/1:0,12:12:26.61:178,27,0	1/1:0,23:23:67.18:390,67,0	1/1:0,8:8:15.90:92,16,0	1/1:0,18:18:51.06:273,51,0	1/1:0,11:11:15.55:138,16,0	1/1:0,10:10:8.30:46,8,0	1/1:0,22:22:61.48:358,61,0	1/1:0,16:16:34.62:257,35,0	1/1:1,23:24:68.45:422,68,0	1/1:0,3:3:8.89:59,9,0
chr10	28482405	.	TCAAC	T	8474.39	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=15.685;DP=882;FS=3.688;HRun=0;HaplotypeScore=139.3125;InbreedingCoeff=0.9998;MQ=62.07;MQ0=5;MQRankSum=2.770;QD=27.16;ReadPosRankSum=4.190;VQSLOD=4.9270;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,40:49:93.23:1548,93,0	0/0:17,0:17:36.11:0,36,790	0/0:27,0:23:44.31:0,44,774	0/0:28,0:25:54.60:0,55,845	1/1:3,16:19:29.90:403,30,0	1/1:5,16:21:30.05:469,30,0	1/1:10,26:36:51.17:849,51,0	0/0:40,0:40:66.16:0,66,1204	1/1:10,40:48:84.29:1397,84,0	0/0:37,0:37:81.13:0,81,1757	0/0:26,0:26:71.89:0,72,1350	1/1:9,24:33:63.22:1049,63,0	0/0:47,0:47:99:0,111,2525	0/0:35,0:35:99:0,99,2088	0/0:31,0:31:81.24:0,81,1824	0/0:36,1:37:46.30:0,46,1974	0/0:21,0:21:51.16:0,51,1205	0/0:26,0:26:66.07:0,66,1324	1/1:12,13:25:39.01:469,39,0	1/1:9,25:34:62.94:893,63,0	1/1:7,37:44:84.29:1399,84,0	0/0:38,0:38:99:0,99,1994	0/0:35,0:35:98.93:0,99,1907	0/0:24,0:24:63.13:0,63,1274	0/0:25,0:25:63.13:0,63,1327	0/0:31,0:31:75.24:0,75,1681	0/0:29,0:29:63.09:0,63,1300	0/0:16,0:16:45.09:0,45,1035
chr10	28486113	.	AC	A	16533.99	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-4.621;DP=641;FS=2.422;HRun=6;HaplotypeScore=69.3514;InbreedingCoeff=0.8923;MQ=83.55;MQ0=0;MQRankSum=-9.186;QD=27.37;ReadPosRankSum=5.538;VQSLOD=5.0891;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,37:42:99:1160,108,0	1/1:0,10:10:23.90:258,24,0	0/0:21,0:21:50.52:0,51,557	0/0:16,0:16:10.39:0,10,456	1/1:2,13:15:33.08:354,33,0	1/1:2,22:24:66.16:709,66,0	1/1:3,30:33:75.19:806,75,0	1/1:2,20:22:54.13:580,54,0	1/1:1,14:15:42.11:451,42,0	1/1:4,15:19:48.11:510,48,0	1/1:1,15:16:35.74:386,36,0	1/1:2,25:27:66.16:709,66,0	1/1:2,17:19:48.12:515,48,0	1/1:1,27:28:78.20:838,78,0	1/1:4,24:28:69.17:740,69,0	1/1:1,14:15:39.10:419,39,0	1/1:2,33:35:96.24:1032,96,0	1/1:5,27:32:75.19:806,75,0	1/1:6,17:23:51.10:535,51,0	1/1:1,22:23:66.17:709,66,0	1/1:1,43:44:99:1290,120,0	1/1:2,18:20:51.13:548,51,0	1/1:3,10:13:33.08:354,33,0	1/1:1,36:37:99:1096,102,0	1/1:1,10:11:30.08:322,30,0	1/1:3,26:29:69.16:740,69,0	1/1:2,20:22:59.97:633,60,0	1/1:0,2:2:3.01:32,3,0
chr10	28486735	.	A	AGCT	573.58	PASS	AB=0.940;AC=18;AF=0.346;AN=52;BaseQRankSum=7.450;DP=231;FS=7.483;HRun=0;HaplotypeScore=75.5695;InbreedingCoeff=0.4757;MQ=50.85;MQ0=4;MQRankSum=-6.983;QD=6.30;ReadPosRankSum=3.448;VQSLOD=1.0168;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:9,0:9:4.28:89,4,0	0/0:4,0:4:9.92:0,10,168	./.	./.	0/1:7,1:8:3.37:7,0,3	1/1:5,0:5:4.16:51,4,0	1/1:9,0:9:6.51:48,7,0	0/0:40,0:37:99:0,111,1786	1/1:2,0:2:3.38:11,3,0	0/0:6,0:6:18.06:0,18,320	0/0:8,0:8:23.99:0,24,379	1/1:5,0:5:9.98:33,10,0	0/0:6,0:6:18.04:0,18,283	0/0:2,0:2:6.02:0,6,112	0/0:10,0:10:30.03:0,30,519	0/0:9,0:9:25.63:0,26,420	0/1:14,1:15:23.72:109,0,24	0/1:13,1:14:65.10:96,0,65	0/1:13,0:13:99:176,0,171	1/1:8,1:9:20.26:107,20,0	1/1:2,0:2:2.60:10,3,0	0/0:7,0:7:9.03:0,9,158	0/0:2,0:2:6.02:0,6,111	0/0:1,0:1:3.01:0,3,56	0/0:10,0:10:28.64:0,29,453	0/0:8,0:8:24.08:0,24,395	0/0:6,0:6:13.18:0,13,166	0/0:19,0:19:57.18:0,57,991
chr10	28486736	.	A	AATAGCTAGCTAGCTAG	3461.48	PASS	AB=1.000;AC=20;AF=0.385;AN=52;BaseQRankSum=-2.883;DP=233;FS=0.000;HRun=0;HaplotypeScore=129.2499;InbreedingCoeff=0.6934;MQ=50.93;MQ0=4;MQRankSum=-9.091;QD=38.04;ReadPosRankSum=0.871;VQSLOD=2.9365;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,0:9:6.02:276,6,0	0/0:4,0:4:12.02:0,12,365	./.	./.	1/1:7,0:8:12.01:159,12,0	0/1:5,0:5:12.98:47,0,13	1/1:9,0:9:15.04:233,15,0	0/0:40,0:37:66.22:0,66,2074	1/1:2,0:2:6.01:78,6,0	0/0:6,0:6:15.05:0,15,567	0/0:8,0:8:21.07:0,21,656	1/1:5,0:5:15.05:237,15,0	0/0:6,0:6:9.03:0,9,343	0/0:3,0:3:7.27:0,7,267	0/0:10,0:10:27.09:0,27,948	0/0:9,0:9:24.08:0,24,728	1/1:14,0:15:21.02:758,21,0	1/1:9,4:14:15.91:656,16,0	0/1:13,0:13:8.36:456,0,8	1/1:8,0:9:24.08:507,24,0	1/1:2,0:2:3.01:55,3,0	0/0:7,0:7:9.03:0,9,200	0/0:2,0:2:6.02:0,6,244	0/0:1,0:1:3.01:0,3,133	0/0:10,0:10:24.07:0,24,784	0/0:9,0:9:23.08:0,23,623	0/0:6,0:6:12.04:0,12,321	0/0:19,0:19:51.11:0,51,1772
chr10	28486737	.	ATAGC	A	4184.27	PASS	AB=0.993;AC=23;AF=0.442;AN=52;BaseQRankSum=-8.995;DP=271;FS=9.570;HRun=0;HaplotypeScore=78.0260;InbreedingCoeff=0.3813;MQ=49.10;MQ0=4;MQRankSum=7.946;QD=29.47;ReadPosRankSum=-2.700;VQSLOD=2.2048;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:12:6.02:0,6,108	1/1:5,0:5:15.05:243,15,0	./.	./.	0/0:12,0:13:15.05:0,15,216	0/0:6,0:6:9.03:0,9,152	0/0:15,0:15:18.06:0,18,258	1/1:16,23:36:69.21:1063,69,0	0/0:5,0:5:6.02:0,6,92	1/1:6,0:6:15.05:251,15,0	1/1:9,0:9:5.91:307,6,0	0/0:8,0:8:15.04:0,15,168	1/1:6,0:6:9.03:148,9,0	0/1:3,0:3:20.55:40,0,21	1/1:9,1:10:7.46:295,7,0	0/1:9,0:9:7.37:275,0,7	0/0:20,0:21:24.08:0,24,341	0/0:16,0:18:20.10:0,20,275	0/0:7,0:14:36.09:0,36,586	0/0:10,0:11:24.07:0,24,301	0/0:4,0:4:3.01:0,3,37	1/1:0,7:7:17.97:193,18,0	1/1:2,0:2:6.02:79,6,0	0/1:2,0:2:13.14:42,0,13	0/1:10,0:10:8.35:228,0,8	0/1:9,0:9:14.25:273,0,14	0/1:6,0:6:3.31:135,0,3	0/1:18,1:19:31.94:613,0,32
chr10	28487475	.	AACACACACACACACACACACACACACACATACAC	A	3718.81	PASS	AB=0.879;AC=15;AF=0.268;AN=56;BaseQRankSum=1.259;DP=570;FS=16.670;HRun=0;HaplotypeScore=391.5067;InbreedingCoeff=0.6448;MQ=65.17;MQ0=9;MQRankSum=-3.680;QD=20.32;ReadPosRankSum=-0.055;VQSLOD=0.3942;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,12:18:3.01:259,3,0	0/0:12,0:12:11.05:0,11,1049	0/0:29,0:20:30.51:0,31,498	0/0:31,0:17:9.03:0,9,139	1/1:7,21:28:8.25:606,8,0	1/1:7,9:16:6.02:518,6,0	0/1:20,0:19:79.22:79,0,97	0/0:24,0:24:33.11:0,33,2206	1/1:10,17:27:6.02:518,6,0	0/0:21,0:20:42.12:0,42,3628	0/0:16,0:15:27.07:0,27,1685	1/1:1,12:13:11.14:1035,11,0	0/0:28,0:28:48.61:0,49,3515	0/0:13,0:13:21.32:0,21,2537	0/0:22,0:22:35.62:0,36,2826	0/0:13,0:13:17.77:0,18,1664	0/0:15,0:18:30.10:0,30,1490	0/0:19,0:21:54.15:0,54,2916	1/1:17,0:16:23.34:152,23,0	0/1:9,12:21:2.29:510,0,2	0/1:22,0:22:41.26:41,0,70	0/0:21,0:21:15.05:0,15,1626	0/0:24,0:24:33.46:0,33,1964	0/0:26,0:26:21.07:0,21,2215	0/0:14,0:14:24.07:0,24,1156	0/0:20,0:20:48.16:0,48,3051	0/0:24,0:25:42.60:0,43,3413	0/0:8,0:8:15.05:0,15,1370
chr10	28487505	.	TACAC	T	3010.20	PASS	AB=1.000;AC=28;AF=0.538;AN=52;BaseQRankSum=-5.707;DP=537;FS=1.096;HRun=0;HaplotypeScore=137.6489;InbreedingCoeff=0.2086;MQ=51.24;MQ0=16;MQRankSum=-0.364;QD=9.44;ReadPosRankSum=-4.251;VQSLOD=1.3015;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:12:3:28,3,0	0/0:11,0:11:10.94:0,11,67	0/0:30,0:5:12.30:0,12,146	0/0:46,0:11:17.60:0,18,208	1/1:21,0:21:5.68:39,6,0	1/1:9,0:9:6.01:56,6,0	1/1:3,0:2:2.99:24,3,0	1/1:14,17:31:27.76:605,28,0	1/1:17,0:17:6.01:56,6,0	0/1:24,0:23:99:130,0,210	0/1:13,0:13:45.72:82,0,46	1/1:12,0:12:12.01:112,12,0	0/1:24,0:24:99:207,0,113	0/1:16,0:16:99:151,0,142	0/1:21,0:21:99:201,0,119	0/1:15,0:15:32.90:156,0,33	1/1:19,2:21:17.97:406,18,0	1/1:23,2:25:33.33:487,33,0	./.	1/1:12,0:12:6.01:56,6,0	./.	0/0:28,0:28:25.11:0,25,203	0/0:30,0:30:12.34:0,12,89	0/0:31,0:31:11.21:0,11,115	0/0:16,0:16:6:0,6,53	0/1:29,0:29:99:227,0,178	0/0:24,0:24:5.12:0,5,205	0/1:9,0:12:27.96:166,0,28
chr10	28487509	.	C	CACAT	4675.82	PASS	AB=0.926;AC=28;AF=0.519;AN=54;BaseQRankSum=-6.677;DP=618;FS=2.091;HRun=0;HaplotypeScore=189.1909;InbreedingCoeff=0.4095;MQ=49.46;MQ0=17;MQRankSum=7.375;QD=12.64;ReadPosRankSum=1.272;VQSLOD=4.2666;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:30:28.45:0,28,171	1/1:0,10:13:8.86:226,9,0	0/0:35,0:6:15.05:0,15,222	0/0:49,0:13:20.92:0,21,281	0/1:26,0:26:2.43:2,0,27	0/0:11,0:11:7.56:0,8,60	0/0:10,0:9:10.26:0,10,31	0/1:31,0:31:34.46:337,0,34	0/0:23,0:23:10.70:0,11,77	1/1:7,16:24:8.23:507,8,0	1/1:11,0:11:20.41:178,20,0	0/0:18,0:18:22.13:0,22,163	1/1:23,0:23:27.03:330,27,0	1/1:15,0:15:31.78:271,32,0	1/1:23,1:24:47.58:627,48,0	0/1:16,0:16:40.29:162,0,40	0/1:20,0:19:80.35:129,0,80	0/1:23,0:23:81.25:81,0,242	0/0:10,0:8:2.50:0,2,13	0/0:18,0:18:9.52:0,10,67	./.	0/1:6,22:29:17.06:155,0,17	0/0:8,27:36:8.60:0,9,59	1/1:7,22:31:0.13:282,0,0	1/1:4,12:16:5.94:160,6,0	1/1:8,18:29:9.67:625,10,0	1/1:4,18:25:7.06:403,7,0	1/1:12,1:13:5.70:201,6,0
chr10	28487511	.	C	CAT	1330.58	PASS	AB=0.989;AC=19;AF=0.339;AN=56;BaseQRankSum=-1.711;DP=633;FS=14.153;HRun=0;HaplotypeScore=196.5947;InbreedingCoeff=-0.0012;MQ=52.25;MQ0=17;MQRankSum=2.132;QD=4.07;ReadPosRankSum=4.223;VQSLOD=1.5247;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:31:53.55:0,54,460	0/1:13,0:13:12.93:70,0,13	0/0:40,0:9:17.41:0,17,201	0/0:49,0:15:22.38:0,22,315	0/0:30,0:30:10.98:0,11,127	0/0:12,0:12:9.15:0,9,85	0/0:9,0:9:24.01:0,24,220	0/1:31,0:31:41.85:42,0,310	0/0:23,0:23:23.35:0,23,171	0/1:24,0:23:99:253,0,119	0/1:11,0:11:63.96:82,0,64	0/0:18,0:18:29.34:0,29,230	0/1:22,0:22:72.14:72,0,133	0/1:15,2:17:67.26:67,0,100	0/1:23,1:24:96.09:151,0,96	0/1:16,0:16:44.55:45,0,148	0/1:20,0:19:0.81:1,0,207	0/0:23,0:23:42.71:0,43,390	0/0:12,0:9:20.80:0,21,166	0/0:21,0:21:22.28:0,22,177	0/1:8,0:8:0:0,0,0	0/1:29,0:29:4.97:123,0,5	0/0:35,0:35:17.91:0,18,162	1/1:31,1:32:18.23:187,18,0	1/1:14,0:14:5.98:64,6,0	0/1:26,0:26:99:100,0,205	1/1:24,1:25:2.61:213,3,0	0/1:15,0:15:25.21:25,0,120
chr10	28491016	.	GTGTGTGTGTC	G	2673.76	PASS	AB=1.000;AC=22;AF=0.393;AN=56;BaseQRankSum=2.327;DP=499;FS=18.876;HRun=0;HaplotypeScore=120.2280;InbreedingCoeff=0.5937;MQ=59.45;MQ0=22;MQRankSum=-3.763;QD=10.36;ReadPosRankSum=-1.347;VQSLOD=1.1273;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:5,17:22:1.79:54,2,0	0/0:5,0:5:12.02:0,12,387	0/1:27,0:9:9.81:10,0,17	0/1:39,0:12:0.87:1,0,87	1/1:22,5:26:50.65:722,51,0	1/1:2,25:27:18.06:490,18,0	1/1:2,19:21:3.01:94,3,0	0/0:28,0:26:13.12:0,13,741	1/1:1,7:8:6.02:189,6,0	0/0:14,0:14:39.06:0,39,1006	0/0:17,0:17:35.46:0,35,436	1/1:2,9:11:21.07:584,21,0	0/0:9,0:8:22.97:0,23,665	0/0:13,0:13:26.67:0,27,609	0/0:12,0:11:30.08:0,30,949	0/0:15,0:15:4.50:0,4,776	0/0:18,0:18:0.02:0,0,261	0/1:17,0:17:99:114,0,213	1/1:11,0:10:23.88:185,24,0	1/1:2,21:23:9.03:264,9,0	1/1:13,0:13:19.19:146,19,0	0/0:12,0:11:20.26:0,20,551	0/0:14,0:13:32.99:0,33,856	0/0:21,0:21:36.08:0,36,1077	0/0:18,0:18:36.09:0,36,1278	0/0:24,0:22:19.30:0,19,1327	0/0:21,0:21:41.75:0,42,1522	0/1:11,0:11:11.74:12,0,553
chr10	28491026	.	C	CTG	1605.70	PASS	AB=0.814;AC=21;AF=0.404;AN=52;BaseQRankSum=-5.586;DP=508;FS=2.642;HRun=0;HaplotypeScore=77.7676;InbreedingCoeff=-0.0333;MQ=60.13;MQ0=24;MQRankSum=3.551;QD=5.39;ReadPosRankSum=-0.193;VQSLOD=2.8158;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	1/1:3,0:5:3:26,3,0	0/0:24,0:5:0:0,0,0	0/1:46,0:12:0:1,0,0	0/0:29,0:28:8.39:0,8,40	0/0:26,0:25:13.99:0,14,66	0/0:19,0:19:2.74:0,3,12	0/1:23,0:21:41.43:41,0,109	0/0:7,0:7:5.60:0,6,27	0/1:15,0:15:15.59:201,0,16	0/1:15,3:18:0:0,0,0	0/0:11,0:11:19.59:0,20,93	0/1:8,3:10:37.40:37,0,59	0/1:11,5:16:28.16:40,0,28	1/1:8,4:11:12.04:184,12,0	0/1:11,7:18:34.42:34,0,69	0/0:19,0:20:2.97:0,3,20	0/0:10,0:20:5.68:0,6,28	0/1:9,0:8:0:0,0,0	0/0:22,0:22:8.39:0,8,40	./.	0/1:8,5:12:33.69:34,0,89	0/1:9,6:15:4.69:170,0,5	1/1:12,11:23:2.99:144,3,0	0/1:9,8:17:50.30:167,0,50	0/1:15,8:21:23.70:229,0,24	0/1:7,12:21:18.37:307,0,18	1/1:12,0:11:10.85:134,11,0
chr10	28491752	.	C	CAAGA	6562.25	PASS	AB=1.000;AC=49;AF=0.875;AN=56;BaseQRankSum=-6.843;DP=452;FS=12.050;HRun=0;HaplotypeScore=95.1228;InbreedingCoeff=0.3719;MQ=79.62;MQ0=24;MQRankSum=-0.573;QD=17.93;ReadPosRankSum=-1.097;VQSLOD=3.3315;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:20:40.08:346,40,0	1/1:0,0:3:3.01:48,3,0	0/0:38,0:21:40.43:0,40,339	0/0:48,0:22:45.74:0,46,314	1/1:12,0:15:1.97:196,2,0	1/1:16,0:20:20.18:339,20,0	0/1:4,0:6:1.63:57,0,2	1/1:24,0:24:56.81:523,57,0	0/1:6,0:10:17.31:104,0,17	1/1:22,0:22:62.68:652,63,0	1/1:12,0:10:24.02:224,24,0	1/1:14,0:18:12.21:279,12,0	1/1:6,0:13:8.97:172,9,0	1/1:17,1:17:42.02:470,42,0	1/1:2,17:18:12.04:267,12,0	1/1:3,0:14:6.02:108,6,0	1/1:13,0:13:19.96:268,20,0	1/1:11,0:9:23.86:242,24,0	1/1:10,0:9:26.99:242,27,0	0/1:3,0:7:16.88:29,0,17	1/1:5,0:4:11.99:102,12,0	1/1:4,0:3:8.99:75,9,0	1/1:9,0:9:21.01:230,21,0	1/1:2,13:18:12.04:311,12,0	1/1:6,0:5:14.86:140,15,0	1/1:31,0:30:90.05:856,90,0	1/1:1,13:16:8.79:200,9,0	1/1:0,13:16:1.18:83,1,0
chr10	28491754	.	AGAGAGAG	A	933.93	PASS	AB=0.774;AC=7;AF=0.125;AN=56;BaseQRankSum=6.989;DP=446;FS=49.698;HRun=0;HaplotypeScore=116.2025;InbreedingCoeff=-0.1163;MQ=77.72;MQ0=24;MQRankSum=-5.614;QD=9.83;ReadPosRankSum=5.152;VQSLOD=0.2613;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:17,2:19:78.06:86,0,78	0/0:3,0:3:3.01:0,3,91	0/0:37,0:20:49.62:0,50,524	0/0:47,0:21:52.55:0,53,568	0/1:11,3:14:86.18:142,0,86	0/1:16,2:20:99:126,0,199	0/1:4,0:6:21.52:66,0,22	0/0:26,0:26:59.33:0,59,371	0/1:6,4:10:32.21:244,0,32	0/0:25,0:25:73.20:0,73,1370	0/0:10,0:8:17.08:0,17,198	0/1:13,5:17:99:221,0,139	0/0:15,0:14:16.60:0,17,558	0/0:18,0:17:44.10:0,44,671	0/0:19,0:18:12.04:0,12,446	0/0:15,0:14:12.04:0,12,429	0/0:12,0:12:27.03:0,27,639	0/0:11,0:9:23.87:0,24,519	0/0:10,0:9:25.85:0,26,138	0/1:3,2:7:5.99:178,0,6	0/0:5,0:4:11.65:0,12,66	0/0:3,0:2:5.93:0,6,132	0/0:9,0:9:23.66:0,24,528	0/0:19,0:18:11.87:0,12,442	0/0:6,0:5:11.92:0,12,212	0/0:31,0:30:88.12:0,88,1788	0/0:15,0:14:9.03:0,9,342	0/0:14,0:15:8.24:0,8,187
chr10	28492036	.	C	CT	5183.75	PASS	AB=1.000;AC=53;AF=0.946;AN=56;BaseQRankSum=-1.406;DP=219;FS=8.130;HRun=7;HaplotypeScore=41.5670;InbreedingCoeff=0.3204;MQ=64.30;MQ0=3;MQRankSum=0.694;QD=24.34;ReadPosRankSum=1.382;VQSLOD=4.8250;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,6:8:15.05:181,15,0	1/1:0,1:1:3.01:36,3,0	0/0:6,0:3:2.98:0,3,22	0/1:2,0:2:0:0,0,0	1/1:1,8:9:21.06:254,21,0	1/1:0,10:10:30.09:362,30,0	1/1:1,3:4:9.03:109,9,0	1/1:10,15:23:48.13:567,48,0	1/1:0,4:4:9.03:109,9,0	1/1:2,4:6:12.04:145,12,0	1/1:1,5:6:12.04:145,12,0	1/1:1,8:9:15.05:181,15,0	1/1:3,5:8:15.05:181,15,0	1/1:3,1:4:3.01:36,3,0	1/1:0,3:3:9.03:109,9,0	1/1:4,3:6:6.02:72,6,0	1/1:3,16:18:0.82:456,1,0	1/1:1,8:8:21.06:253,21,0	1/1:2,6:8:21.06:254,21,0	1/1:6,6:12:21.05:243,21,0	1/1:2,5:7:11.95:126,12,0	1/1:1,1:2:3.01:36,3,0	1/1:2,5:7:15.05:181,15,0	1/1:0,3:3:9.03:109,9,0	1/1:1,5:6:12.04:145,12,0	1/1:3,4:7:12.02:133,12,0	1/1:2,7:9:21.06:254,21,0	1/1:3,15:18:42.13:507,42,0
chr10	28492045	.	A	ATATT	1943.23	PASS	AC=36;AF=0.947;AN=38;BaseQRankSum=-0.121;DP=198;FS=0.000;HRun=0;HaplotypeScore=57.5999;InbreedingCoeff=0.0949;MQ=56.61;MQ0=9;MQRankSum=-1.491;QD=12.38;ReadPosRankSum=-0.604;VQSLOD=2.6636;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	1/1:4,0:4:5.98:90,6,0	./.	./.	1/1:7,1:8:3.01:37,3,0	1/1:8,4:12:24.04:455,24,0	./.	1/1:31,0:25:17.96:201,18,0	./.	1/1:5,0:5:2.97:20,3,0	./.	0/0:7,0:7:3.01:0,3,46	1/1:4,1:5:6:82,6,0	1/1:0,1:1:3.01:57,3,0	1/1:4,0:4:3.01:70,3,0	1/1:3,3:5:3.01:69,3,0	1/1:15,0:18:15.04:221,15,0	1/1:9,0:7:3.01:52,3,0	1/1:6,1:7:3.01:70,3,0	./.	1/1:4,0:4:3:27,3,0	./.	1/1:4,2:6:6.02:140,6,0	./.	1/1:4,2:6:6.02:140,6,0	1/1:4,0:4:3.01:62,3,0	1/1:8,0:9:12.03:172,12,0	1/1:15,0:15:6.01:67,6,0
chr10	28492472	.	TTTA	T	1699.51	PASS	AB=0.975;AC=44;AF=0.786;AN=56;BaseQRankSum=0.206;DP=330;FS=57.520;HRun=0;HaplotypeScore=57.0144;InbreedingCoeff=0.4951;MQ=45.77;MQ0=37;MQRankSum=0.708;QD=6.18;ReadPosRankSum=0.269;VQSLOD=-0.0778;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:18,1:13:7.26:119,7,0	1/1:1,0:1:2.50:9,2,0	0/0:9,0:5:8.48:0,8,135	0/0:6,0:3:5.99:0,6,85	1/1:11,1:9:14.08:90,14,0	1/1:10,0:9:7.70:35,8,0	1/1:7,1:8:13.19:74,13,0	1/1:27,1:27:40.96:320,41,0	0/1:10,0:9:3.65:4,0,18	1/1:15,0:14:29.91:150,30,0	1/1:17,0:14:10.97:44,11,0	1/1:9,0:7:15.92:67,16,0	1/1:14,0:12:16.16:107,16,0	1/1:11,1:9:12.36:96,12,0	0/1:11,0:11:3.02:62,0,3	1/1:11,0:11:13.46:55,13,0	0/0:22,0:20:20.23:0,20,143	0/0:17,0:17:44.33:0,44,211	0/1:8,1:7:8.31:76,0,8	1/1:6,0:4:0.69:6,1,0	1/1:7,0:6:12.71:49,13,0	0/1:11,0:10:0.17:74,0,0	1/1:11,0:10:17.76:67,18,0	1/1:4,2:4:5.93:61,6,0	1/1:6,0:6:7.79:30,8,0	1/1:13,0:12:25.74:113,26,0	1/1:8,0:8:1.29:8,1,0	1/1:20,1:16:28.97:143,29,0
chr10	28492473	.	TTA	T	4922.78	PASS	AB=1.000;AC=50;AF=0.893;AN=56;BaseQRankSum=-3.593;DP=325;FS=28.895;HRun=0;HaplotypeScore=40.6080;InbreedingCoeff=0.4281;MQ=45.58;MQ0=40;MQRankSum=3.095;QD=15.88;ReadPosRankSum=1.951;VQSLOD=2.9277;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:12,7:13:16.99:321,17,0	1/1:0,1:1:3.01:37,3,0	0/0:9,0:5:0.54:0,1,100	0/0:6,0:3:5.99:0,6,72	1/1:10,2:9:23.25:151,23,0	1/1:2,8:9:14.63:161,15,0	1/1:3,6:8:14.94:165,15,0	1/1:4,22:25:72.65:571,73,0	1/1:1,7:7:3.01:37,3,0	1/1:1,14:14:35.75:337,36,0	1/1:4,13:14:17.52:198,18,0	1/1:2,7:7:17.99:206,18,0	1/1:12,2:12:31.72:252,32,0	1/1:8,4:9:26.76:244,27,0	1/1:5,6:11:24.42:256,24,0	1/1:1,10:11:20.49:237,20,0	0/1:24,0:20:3.57:4,0,17	0/1:17,0:17:3.49:3,0,34	1/1:4,3:5:11.68:121,12,0	1/1:3,3:4:5.69:48,6,0	1/1:3,5:6:17.08:194,17,0	1/1:8,3:10:22.36:197,22,0	1/1:1,10:10:20.86:262,21,0	1/1:4,1:3:5.92:41,6,0	1/1:0,6:6:9.03:113,9,0	1/1:1,11:11:32.16:327,32,0	1/1:1,7:8:3.48:39,3,0	1/1:6,15:16:33.09:401,33,0
chr10	28493972	.	G	GA	914.73	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=-3.732;DP=481;FS=0.000;HRun=7;HaplotypeScore=61.0860;InbreedingCoeff=0.7597;MQ=60.03;MQ0=23;MQRankSum=0.366;QD=16.94;ReadPosRankSum=-0.292;VQSLOD=3.2824;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:51.07:0,51,492	0/0:3,0:3:6.01:0,6,58	0/0:16,1:5:11.96:0,12,104	0/0:16,0:6:10.33:0,10,107	0/0:25,0:25:57.08:0,57,545	0/0:21,0:20:39.03:0,39,369	0/0:16,0:13:30.03:0,30,284	0/1:16,0:15:0.05:0,0,282	0/0:19,0:19:36.05:0,36,347	0/0:16,0:16:42.07:0,42,405	0/0:19,0:17:39.06:0,39,376	0/0:13,0:13:27.04:0,27,261	0/0:15,0:14:27.04:0,27,260	0/0:15,0:13:30.05:0,30,289	0/0:28,0:27:45.06:0,45,434	0/0:11,0:10:18.03:0,18,174	1/1:10,18:27:66.19:783,66,0	1/1:3,7:9:21.06:252,21,0	0/0:8,0:7:18.02:0,18,168	0/0:27,0:24:63.10:0,63,608	0/0:11,0:11:18.03:0,18,174	0/0:12,0:11:27.03:0,27,255	0/0:22,0:21:51.05:0,51,484	0/0:23,0:23:48.07:0,48,463	0/0:16,0:16:27.01:0,27,255	0/0:22,0:22:57.09:0,57,550	0/0:18,0:15:39.06:0,39,377	0/0:2,0:2:6.01:0,6,58
chr10	28494099	.	GA	G	730.30	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.023;DP=511;FS=12.991;HRun=9;HaplotypeScore=48.5716;InbreedingCoeff=0.9215;MQ=65.64;MQ0=0;MQRankSum=-1.644;QD=17.81;ReadPosRankSum=2.040;VQSLOD=2.5219;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,1:33:71.81:0,72,1068	0/0:4,0:4:12.04:0,12,138	0/0:19,0:14:32.82:0,33,332	0/0:10,0:8:17.21:0,17,192	0/0:25,1:26:41.75:0,42,726	0/0:24,0:24:63.17:0,63,716	0/0:11,1:12:5.60:0,6,304	0/0:24,0:24:54.61:0,55,606	0/0:25,0:25:66.20:0,66,762	0/0:25,0:25:54.16:0,54,622	0/0:22,0:22:57.17:0,57,658	0/0:18,0:18:48.13:0,48,546	0/0:13,0:13:30.09:0,30,345	0/0:13,0:13:33.10:0,33,377	0/0:17,0:17:39.10:0,39,441	0/0:16,0:15:39.12:0,39,450	1/1:5,25:30:69.03:632,69,0	1/1:3,8:11:24.01:220,24,0	0/0:13,0:13:36.11:0,36,412	0/0:28,0:28:69.20:0,69,796	0/0:15,0:15:27.08:0,27,311	0/0:7,0:7:21.05:0,21,234	0/0:20,0:20:57.17:0,57,658	0/0:13,0:13:36.11:0,36,415	0/0:16,0:16:33.10:0,33,381	0/0:19,1:20:29.70:0,30,596	0/0:21,0:21:57.14:0,57,638	0/0:15,0:15:33.10:0,33,381
chr10	28496336	.	A	AAAGTACCATT	20029.39	PASS	AB=0.628;AC=17;AF=0.304;AN=56;BaseQRankSum=-2.479;DP=569;FS=5.003;HRun=0;HaplotypeScore=165.6122;InbreedingCoeff=0.9130;MQ=72.67;MQ0=0;MQRankSum=-16.703;QD=122.88;ReadPosRankSum=-2.775;VQSLOD=4.4741;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,6:16:45.11:1909,45,0	0/0:11,0:11:33.11:0,33,1120	0/0:26,0:26:73.49:0,73,2340	0/0:33,0:33:80.75:0,81,2480	1/1:7,12:21:51.09:2334,51,0	1/1:5,13:21:54.15:2702,54,0	1/1:5,6:12:33.11:1727,33,0	0/0:33,0:33:93.31:0,93,2900	1/1:9,9:19:54.19:2764,54,0	0/0:24,0:24:69.24:0,69,2263	0/0:13,0:13:36.12:0,36,1206	1/1:10,9:21:57.20:2884,57,0	0/0:22,0:22:66.20:0,66,2071	0/0:15,0:15:45.15:0,45,1437	0/0:25,0:25:66.23:0,66,2198	0/0:17,0:17:48.16:0,48,1630	0/0:21,0:21:60.21:0,60,2019	0/0:24,0:24:69.24:0,69,2203	1/1:8,3:12:36.12:1402,36,0	0/1:11,15:27:26.64:3554,0,27	1/1:8,3:13:18.02:752,18,0	0/0:7,0:7:18.06:0,18,562	0/0:31,0:31:90.31:0,90,3018	0/0:19,0:19:54.16:0,54,1754	0/0:14,0:14:42.14:0,42,1409	0/0:16,0:16:48.16:0,48,1615	0/0:27,0:27:78.27:0,78,2636	0/0:28,0:28:81.28:0,81,2729
chr10	28496598	.	T	TAA	5249.72	PASS	AB=0.947;AC=19;AF=0.339;AN=56;BaseQRankSum=2.385;DP=477;FS=6.618;HRun=10;HaplotypeScore=72.4251;InbreedingCoeff=0.9324;MQ=71.63;MQ0=1;MQRankSum=-5.733;QD=31.44;ReadPosRankSum=-1.700;VQSLOD=4.6563;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:8,12:20:45.13:640,45,0	0/0:12,0:12:36.08:0,36,366	0/0:21,0:17:11.61:0,12,202	0/1:17,0:13:4.45:4,0,62	1/1:11,16:26:57.12:774,57,0	1/1:3,16:21:62.98:855,63,0	1/1:2,6:8:18.06:267,18,0	0/0:32,0:32:83.74:0,84,816	1/1:5,6:12:32.96:439,33,0	0/0:23,0:23:60.10:0,60,610	0/0:17,0:17:39.05:0,39,394	1/1:4,7:11:30.10:435,30,0	0/0:19,0:19:51.10:0,51,518	0/0:14,0:14:42.09:0,42,426	0/0:24,0:24:59.31:0,59,586	0/0:10,0:10:27.05:0,27,268	0/0:14,0:15:35.66:0,36,332	0/0:14,0:14:42.09:0,42,427	1/1:6,10:16:39.09:533,39,0	1/1:5,21:27:69.23:1008,69,0	1/1:1,6:7:21.06:294,21,0	0/0:13,0:13:39.08:0,39,391	0/0:13,0:13:39.09:0,39,397	0/0:7,0:7:18.04:0,18,183	0/0:20,0:20:51.04:0,51,510	0/0:22,0:22:63.14:0,63,641	0/0:19,0:19:51.11:0,51,519	0/0:14,0:14:42.10:0,42,427
chr10	28496628	.	G	GA	3651.37	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=3.545;DP=492;FS=4.479;HRun=9;HaplotypeScore=66.0841;InbreedingCoeff=0.9581;MQ=67.77;MQ0=0;MQRankSum=-4.883;QD=24.18;ReadPosRankSum=-1.630;VQSLOD=4.0110;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:3,13:16:39.01:406,39,0	0/0:15,0:15:38.95:0,39,333	0/0:15,0:12:3.85:0,4,28	0/0:14,0:9:11.67:0,12,89	1/1:6,21:27:51.14:564,51,0	1/1:5,15:20:48.04:506,48,0	1/1:1,10:11:27.07:299,27,0	0/0:25,0:25:50.98:0,51,441	1/1:2,12:14:15.85:384,16,0	0/0:26,0:26:62.97:0,63,545	0/0:21,0:21:24.36:0,24,435	1/1:3,9:12:21.06:232,21,0	0/0:14,0:14:38.97:0,39,334	0/0:17,0:17:44.99:0,45,391	0/0:24,0:26:64.98:0,65,548	0/0:11,0:11:23.98:0,24,208	0/0:15,0:15:38.97:0,39,334	0/0:10,0:10:26.99:0,27,234	1/1:3,11:14:33.09:365,33,0	1/1:5,26:32:75.03:807,75,0	1/1:2,3:5:9:89,9,0	0/0:18,0:18:47.99:0,48,416	0/0:22,0:22:56.98:0,57,493	0/0:10,0:10:26.99:0,27,234	0/0:16,0:16:41.99:0,42,365	0/0:24,0:24:71.94:0,72,614	0/0:23,0:23:59.94:0,60,511	0/0:19,0:19:56.99:0,57,495
chr10	28497551	.	TC	T	3548.87	PASS	AB=0.690;AC=46;AF=0.821;AN=56;BaseQRankSum=-2.449;DP=392;FS=1.783;HRun=11;HaplotypeScore=57.1799;InbreedingCoeff=0.3960;MQ=74.01;MQ0=1;MQRankSum=-2.426;QD=10.47;ReadPosRankSum=4.250;VQSLOD=2.7703;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,0:27:43.40:128,43,0	1/1:1,2:3:5.99:49,6,0	0/0:29,0:8:14.97:0,15,100	0/1:20,1:18:24.28:24,0,108	1/1:1,0:10:19.17:62,19,0	1/1:0,0:15:28.52:82,29,0	1/1:2,0:22:38.70:112,39,0	0/1:13,8:22:30.21:128,0,30	1/1:0,0:16:32.59:94,33,0	1/1:4,6:10:17.97:148,18,0	1/1:2,2:5:8.03:55,8,0	1/1:0,0:9:16.30:47,16,0	1/1:1,13:15:13.52:258,14,0	1/1:0,13:13:35.96:295,36,0	1/1:3,18:21:44.90:363,45,0	1/1:4,10:14:35.86:286,36,0	0/0:9,0:17:2.44:0,2,33	0/0:2,0:7:5.68:0,6,28	1/1:4,0:9:10.74:33,11,0	1/1:0,0:6:12.22:35,12,0	1/1:2,0:16:24.44:71,24,0	0/1:1,3:4:20:62,0,20	1/1:0,6:7:17.02:129,17,0	1/1:2,9:12:26:203,26,0	1/1:1,12:13:29.96:246,30,0	1/1:6,11:17:28.95:224,29,0	1/1:4,15:19:26.96:222,27,0	0/1:1,10:11:2.01:192,0,2
chr10	28499308	.	AGT	A	2476.68	PASS	AB=0.824;AC=51;AF=0.981;AN=52;BaseQRankSum=0.982;DP=590;FS=0.000;HRun=0;HaplotypeScore=91.6664;InbreedingCoeff=0.1047;MQ=68.39;MQ0=14;MQRankSum=1.987;QD=4.65;ReadPosRankSum=0.667;VQSLOD=1.9733;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:28:11.36:56,11,0	1/1:6,4:10:12.03:129,12,0	./.	./.	1/1:8,0:19:17.04:84,17,0	1/1:22,0:30:22.73:112,23,0	1/1:11,0:15:8.52:42,9,0	1/1:30,0:29:2.97:21,3,0	1/1:6,0:16:28.41:140,28,0	1/1:14,6:20:15.04:163,15,0	1/1:8,1:10:5.85:47,6,0	1/1:14,0:17:8.52:42,9,0	1/1:12,5:17:17.71:158,18,0	1/1:18,6:25:14.87:144,15,0	1/1:19,4:23:12.03:130,12,0	1/1:10,3:13:6.01:65,6,0	1/1:18,4:22:17.55:156,18,0	0/1:22,4:27:47.17:84,0,47	1/1:15,0:16:2.84:14,3,0	1/1:16,0:25:14.20:70,14,0	1/1:27,0:27:0.47:1,0,0	1/1:15,1:17:11.86:111,12,0	1/1:11,7:18:14.87:163,15,0	1/1:13,6:20:20.72:191,21,0	1/1:17,3:21:9.15:61,9,0	1/1:17,5:22:11.12:114,11,0	1/1:19,6:26:15.34:145,15,0	1/1:7,4:11:14.70:126,15,0
chr10	28500688	.	TG	T	1741.98	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=3.583;DP=522;FS=0.996;HRun=3;HaplotypeScore=50.3642;InbreedingCoeff=0.9036;MQ=71.07;MQ0=29;MQRankSum=-1.834;QD=13.40;ReadPosRankSum=-2.448;VQSLOD=1.4712;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:22:49.84:371,50,0	0/0:10,0:10:20.94:0,21,173	0/0:53,0:20:24.11:0,24,305	0/0:60,0:16:2.82:0,3,107	1/1:13,0:13:30.17:226,30,0	1/1:11,0:11:26.90:214,27,0	1/1:14,0:14:32.83:260,33,0	0/0:33,0:32:45.14:0,45,400	1/1:12,0:9:20.89:167,21,0	0/0:26,0:24:47.89:0,48,425	0/0:14,0:13:29.45:0,29,236	1/1:9,0:8:20.87:161,21,0	0/0:9,0:9:11.99:0,12,102	0/0:10,0:10:20.98:0,21,182	0/0:10,0:10:18:0,18,158	0/0:20,0:20:44.82:0,45,376	0/0:25,0:25:26.50:0,27,374	0/0:10,0:10:0.25:0,0,107	1/1:4,12:17:34.48:273,34,0	1/1:17,0:15:30.11:234,30,0	1/1:15,0:14:5.95:44,6,0	0/0:8,0:7:14.52:0,15,122	0/0:16,0:15:20.97:0,21,234	0/0:19,0:18:48.40:0,48,401	0/0:14,0:16:29.95:0,30,286	0/0:20,0:17:30.40:0,30,266	0/0:21,0:21:38.65:0,39,308	0/0:10,0:9:20.95:0,21,175
chr10	28500690	.	GGTTTTTTT	G	1599.11	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=4.793;DP=517;FS=22.276;HRun=0;HaplotypeScore=99.3552;InbreedingCoeff=0.9488;MQ=68.89;MQ0=33;MQRankSum=1.716;QD=13.44;ReadPosRankSum=3.348;VQSLOD=0.6692;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:21:42.32:345,42,0	0/0:12,0:12:35.23:0,35,689	0/0:56,0:20:34.82:0,35,581	0/0:60,0:15:29.91:0,30,209	1/1:10,1:12:22.91:264,23,0	1/1:11,0:11:22.87:193,23,0	1/1:12,0:12:31.54:240,32,0	0/0:38,0:35:89.16:0,89,1245	1/1:10,0:7:20.89:167,21,0	0/0:27,0:25:75.08:0,75,1506	0/0:14,0:13:38.92:0,39,926	1/1:8,0:7:12.31:128,12,0	0/0:9,0:9:21.01:0,21,327	0/0:9,0:9:21.01:0,21,511	0/0:10,0:10:24.06:0,24,624	0/0:18,0:18:44.16:0,44,666	0/0:24,0:24:66.05:0,66,1290	0/0:9,0:9:24.08:0,24,724	1/1:16,0:15:10.88:246,11,0	1/1:15,0:13:7.07:178,7,0	1/1:2,12:13:4.83:44,5,0	0/0:9,0:8:17.02:0,17,183	0/0:16,0:14:27.71:0,28,827	0/0:20,0:19:48:0,48,868	0/0:17,0:16:39.08:0,39,900	0/0:20,0:17:49.63:0,50,1039	0/0:21,0:21:55.52:0,56,1155	0/0:9,0:8:21.05:0,21,555
chr10	28500853	.	GA	G	2916.59	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=12.214;DP=429;FS=6.886;HRun=9;HaplotypeScore=45.8710;InbreedingCoeff=0.9539;MQ=57.36;MQ0=6;MQRankSum=-1.403;QD=18.94;ReadPosRankSum=1.662;VQSLOD=3.5613;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,42:45:99:961,105,0	0/0:9,0:9:24.07:0,24,277	0/0:5,0:1:3.01:0,3,35	0/0:10,0:7:12.76:0,13,138	1/1:7,20:26:54.02:493,54,0	1/1:0,11:11:30.02:275,30,0	1/1:1,7:8:18.01:165,18,0	0/0:26,0:26:66.55:0,67,787	1/1:2,9:11:15.01:137,15,0	0/0:16,0:16:39.12:0,39,450	0/0:24,0:24:63.19:0,63,727	1/1:2,10:12:24.01:220,24,0	0/0:8,0:8:15.04:0,15,165	0/0:12,0:12:30.08:0,30,338	0/0:12,0:12:30.09:0,30,346	0/0:18,0:18:36.02:0,36,370	0/0:25,0:24:60.18:0,60,692	0/0:20,0:20:39.12:0,39,449	1/1:0,11:11:33.02:302,33,0	1/1:2,15:17:41.93:384,42,0	1/1:4,8:12:21:192,21,0	0/0:7,0:7:12.03:0,12,137	0/0:14,0:14:30.09:0,30,346	0/0:15,0:15:39.12:0,39,450	0/0:15,0:15:42.12:0,42,484	0/0:13,0:13:39.03:0,39,418	0/0:20,0:20:54.14:0,54,605	0/0:6,0:5:15.02:0,15,161
chr10	28501525	.	A	AC	967.94	PASS	AB=0.982;AC=11;AF=0.196;AN=56;BaseQRankSum=10.517;DP=494;FS=123.782;HRun=0;HaplotypeScore=78.2597;InbreedingCoeff=0.3110;MQ=53.39;MQ0=8;MQRankSum=9.688;QD=4.94;ReadPosRankSum=2.983;VQSLOD=0.3383;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:38,2:39:15.85:282,16,0	0/0:10,0:10:26.79:0,27,194	0/0:22,0:7:12.65:0,13,120	0/0:14,0:8:12:0,12,97	0/1:19,0:19:34.87:96,0,35	1/1:18,1:19:8.81:132,9,0	0/1:25,1:24:15.63:105,0,16	0/0:36,0:35:94.05:0,94,648	0/1:13,0:13:16.37:63,0,16	0/0:18,0:17:50.59:0,51,376	0/0:15,0:15:41.42:0,41,277	0/1:15,0:15:15.46:15,0,26	0/0:11,0:10:26.66:0,27,184	0/0:10,0:10:26.06:0,26,170	0/0:9,0:9:26.07:0,26,170	0/0:7,0:7:14.77:0,15,96	0/0:22,0:22:44.68:0,45,338	0/0:18,0:17:43.59:0,44,300	0/1:19,2:21:0.67:181,0,1	0/1:18,0:18:8.23:108,0,8	0/1:25,0:24:5.22:140,0,5	0/0:6,0:6:17.80:0,18,129	0/0:15,0:15:42.63:0,43,276	0/0:9,0:7:11.81:0,12,81	0/0:21,0:21:55.90:0,56,389	0/0:20,0:19:52.84:0,53,370	0/0:10,0:9:26.81:0,27,198	0/0:25,0:25:52.53:0,53,340
chr10	28501719	.	TG	T	2715.22	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=6.461;DP=534;FS=8.759;HRun=2;HaplotypeScore=109.3044;InbreedingCoeff=0.9967;MQ=65.89;MQ0=3;MQRankSum=-1.908;QD=17.75;ReadPosRankSum=0.308;VQSLOD=2.9392;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,12:18:41.63:339,42,0	0/0:9,0:9:24.08:0,24,350	0/0:21,0:15:45.05:0,45,624	0/0:31,0:19:33.76:0,34,482	1/1:7,10:19:42.38:391,42,0	1/1:6,8:14:41.10:323,41,0	1/1:4,14:18:24.90:229,25,0	0/0:23,0:23:66.01:0,66,934	1/1:5,9:14:36.45:303,36,0	0/0:24,0:24:72.24:0,72,1060	0/0:26,0:26:69.23:0,69,996	1/1:8,6:15:32.96:287,33,0	0/0:14,0:14:30.06:0,30,396	0/0:11,0:11:27.09:0,27,382	0/0:9,0:9:18.06:0,18,260	0/0:10,0:10:21.07:0,21,310	0/0:28,0:28:78.24:0,78,1081	0/0:33,0:33:81.19:0,81,1071	1/1:6,8:15:38.96:343,39,0	1/1:16,12:29:70.25:513,70,0	1/1:6,5:11:23.95:204,24,0	0/0:22,0:21:57.19:0,57,827	0/0:13,0:13:33.11:0,33,464	0/0:13,0:13:32.89:0,33,484	0/0:23,0:23:60.18:0,60,839	0/0:29,0:29:87.25:0,87,1226	0/0:21,0:20:48.16:0,48,696	0/0:21,0:21:57.19:0,57,844
chr10	28501720	.	GGTA	G	4966.77	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-2.412;DP=533;FS=27.460;HRun=0;HaplotypeScore=120.4281;InbreedingCoeff=0.9687;MQ=65.04;MQ0=3;MQRankSum=-3.446;QD=33.11;ReadPosRankSum=0.368;VQSLOD=3.1465;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,4:17:42.03:527,42,0	0/0:9,0:9:16.86:0,17,130	0/0:22,0:15:44.43:0,44,869	0/0:30,0:18:45.04:0,45,657	1/1:18,0:19:51.03:674,51,0	1/1:13,2:15:45.10:588,45,0	1/1:16,0:16:27.06:330,27,0	0/0:22,0:22:50.40:0,50,500	1/1:12,2:14:39.09:485,39,0	0/0:24,0:24:57.21:0,57,678	0/0:26,0:26:41.52:0,42,350	1/1:15,0:15:39.06:474,39,0	0/0:14,0:14:10.43:0,10,95	0/0:11,0:11:8.20:0,8,136	0/0:9,0:9:14.14:0,14,71	0/0:10,0:10:16.22:0,16,112	0/0:28,0:28:78.26:0,78,1315	0/0:33,0:33:81.27:0,81,1337	1/1:14,1:15:30.15:560,30,0	1/1:14,14:28:75.20:999,75,0	1/1:11,0:11:24.07:329,24,0	0/0:22,0:21:40.20:0,40,376	0/0:13,0:13:10.63:0,11,237	0/0:13,0:13:24.70:0,25,184	0/0:23,0:23:42.54:0,43,320	0/0:30,0:30:58.44:0,58,523	0/0:21,0:20:31.14:0,31,263	0/0:23,0:23:47.68:0,48,276
chr10	28501722	.	TA	T	3031.88	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=0.258;DP=535;FS=24.842;HRun=1;HaplotypeScore=109.1043;InbreedingCoeff=0.9123;MQ=65.89;MQ0=3;MQRankSum=-1.391;QD=16.48;ReadPosRankSum=-0.010;VQSLOD=2.3962;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,11:17:41.70:369,42,0	0/0:9,0:9:22.39:0,22,117	0/0:23,0:16:40.29:0,40,431	0/0:32,0:19:23.64:0,24,375	1/1:10,9:19:44.10:420,44,0	1/1:6,8:14:40.75:349,41,0	1/1:7,8:15:27.04:271,27,0	0/0:23,0:23:63.14:0,63,401	1/1:4,9:13:35.25:328,35,0	0/0:24,0:24:68.76:0,69,473	0/0:26,0:26:60.92:0,61,326	1/1:6,7:13:34.42:305,34,0	0/0:14,0:14:28.35:0,28,134	0/0:11,0:11:21.31:0,21,124	0/0:10,0:10:18.05:0,18,84	0/0:10,0:10:19.64:0,20,109	0/0:28,0:28:2.03:0,2,150	0/1:34,0:34:2.94:3,0,165	1/1:10,8:18:43.83:398,44,0	1/1:16,13:29:73.21:584,73,0	1/1:7,5:12:23.99:217,24,0	0/0:22,0:21:50.31:0,50,287	0/0:13,0:13:26.60:0,27,169	0/0:13,0:13:30.76:0,31,173	0/0:21,0:21:50.39:0,50,274	0/0:29,0:29:76.96:0,77,453	0/0:20,0:20:41.36:0,41,232	0/0:23,0:23:54.18:0,54,293
chr10	28501723	.	ATTT	A	6542.65	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-12.314;DP=544;FS=13.370;HRun=13;HaplotypeScore=117.3489;InbreedingCoeff=0.9608;MQ=65.40;MQ0=3;MQRankSum=1.352;QD=24.78;ReadPosRankSum=3.867;VQSLOD=2.3965;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:21.02:0,21,189	1/1:0,7:8:20.97:237,21,0	0/0:24,0:17:29.51:0,30,317	0/0:32,0:18:0.61:0,1,244	0/0:20,0:20:33.61:0,34,198	0/0:15,0:15:28.75:0,29,212	0/0:15,0:15:28.48:0,28,222	1/1:8,15:24:47.69:516,48,0	0/0:14,0:14:29.77:0,30,145	1/1:8,15:23:45.03:533,45,0	1/1:2,23:26:52.44:654,52,0	0/0:15,0:15:35.39:0,35,258	1/1:1,12:14:30.08:361,30,0	1/1:2,8:10:21.04:255,21,0	1/1:0,8:9:21:235,21,0	1/1:1,9:10:18.05:219,18,0	0/0:10,0:29:71.78:0,72,600	0/0:9,0:34:70.63:0,71,612	0/0:20,0:20:44.17:0,44,397	0/0:29,0:29:32.48:0,32,211	0/0:12,0:12:18.23:0,18,122	1/1:3,16:20:37.21:451,37,0	1/1:4,8:13:20.93:237,21,0	1/1:3,10:13:26.91:328,27,0	1/1:2,19:21:48.13:584,48,0	1/1:5,24:29:72.12:858,72,0	1/1:3,16:20:39:455,39,0	1/1:2,21:23:51.14:620,51,0
chr10	28506934	.	GGTC	G	2424.51	PASS	AB=0.994;AC=42;AF=0.750;AN=56;BaseQRankSum=1.296;DP=542;FS=49.192;HRun=0;HaplotypeScore=107.1464;InbreedingCoeff=-0.3891;MQ=45.68;MQ0=16;MQRankSum=-1.354;QD=4.47;ReadPosRankSum=-0.531;VQSLOD=0.4302;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:28,1:28:21.78:146,22,0	1/1:5,0:5:7.22:43,7,0	0/1:61,0:14:42.72:43,0,171	0/1:64,0:17:68.66:69,0,148	0/1:16,0:16:1.53:99,0,2	0/1:26,0:26:24.97:161,0,25	1/1:11,0:10:15.54:67,16,0	0/1:31,0:28:99:126,0,165	0/1:8,0:8:10.86:71,0,11	1/1:16,1:17:1.96:118,2,0	1/1:15,1:13:0.25:39,0,0	1/1:11,1:12:2.25:38,2,0	1/1:14,0:14:6.45:137,6,0	1/1:3,0:3:5.91:50,6,0	1/1:13,0:13:13.05:80,13,0	1/1:18,0:17:2.40:141,2,0	0/1:20,0:19:71.04:128,0,71	0/1:13,0:12:25.84:26,0,85	0/1:26,1:25:68.84:85,0,69	1/1:17,2:19:19.36:268,19,0	1/1:8,0:8:6.37:43,6,0	0/1:12,0:11:32.22:39,0,32	1/1:13,0:13:18.71:141,19,0	1/1:11,0:11:6.25:40,6,0	0/1:11,0:11:1.46:89,0,1	0/1:19,0:17:20.77:75,0,21	0/1:25,1:26:15.80:173,0,16	0/1:15,0:14:25.72:35,0,26
chr10	28506951	.	TTTC	T	1906.34	PASS	AB=0.970;AC=35;AF=0.625;AN=56;BaseQRankSum=-4.338;DP=561;FS=34.831;HRun=0;HaplotypeScore=100.7751;InbreedingCoeff=-0.0907;MQ=51.63;MQ0=25;MQRankSum=5.402;QD=5.08;ReadPosRankSum=5.401;VQSLOD=0.4665;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:29:11.60:84,12,0	1/1:5,0:5:2.92:18,3,0	0/0:82,0:18:37.04:0,37,371	0/0:73,0:21:47.23:0,47,441	0/1:17,0:17:5.39:58,0,5	0/1:24,0:24:51.67:52,0,87	1/1:9,0:9:5.57:58,6,0	0/1:32,2:31:99:251,0,134	0/1:15,0:14:8.54:141,0,9	1/1:17,1:18:13.70:184,14,0	1/1:13,0:11:8.21:98,8,0	0/1:13,0:13:15.31:15,0,19	1/1:9,7:16:7.04:82,7,0	0/1:6,1:6:2.58:34,0,3	1/1:14,0:14:7.45:30,7,0	0/1:13,2:14:14.94:89,0,15	0/1:18,0:18:30.06:30,0,133	0/0:12,0:12:0.40:0,0,170	0/1:25,1:25:16.10:195,0,16	1/1:17,1:18:30.19:260,30,0	1/1:4,0:3:5.92:41,6,0	0/1:10,0:9:7.49:43,0,7	1/1:12,0:12:10.72:77,11,0	1/1:12,1:13:8.46:34,8,0	0/1:10,0:10:24.49:36,0,24	0/1:15,1:15:30.44:103,0,30	0/1:19,0:19:56.77:58,0,57	0/0:17,1:17:4.64:0,5,63
chr10	28506952	.	TTC	T	4331.99	PASS	AB=0.769;AC=47;AF=0.839;AN=56;BaseQRankSum=-5.281;DP=543;FS=31.069;HRun=0;HaplotypeScore=83.9797;InbreedingCoeff=0.2536;MQ=52.30;MQ0=24;MQRankSum=3.437;QD=11.22;ReadPosRankSum=4.023;VQSLOD=2.3440;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,24:29:10.86:220,11,0	1/1:1,4:5:2.58:18,3,0	0/0:84,0:19:36.33:0,36,304	0/0:73,0:21:40.97:0,41,316	1/1:5,12:17:6.79:67,7,0	0/1:8,14:23:8.84:225,0,9	1/1:2,7:9:11.37:104,11,0	1/1:10,20:28:11.87:469,12,0	1/1:12,2:13:22.16:247,22,0	1/1:3,12:15:32.50:320,32,0	1/1:10,1:9:16.17:123,16,0	1/1:2,8:11:11.66:105,12,0	1/1:11,3:14:14.82:145,15,0	1/1:3,4:6:5.80:39,6,0	1/1:4,10:14:8.94:109,9,0	1/1:7,8:14:19.16:198,19,0	0/1:16,0:16:27.38:30,0,27	0/1:13,0:13:26.41:26,0,68	1/1:13,10:23:44.63:459,45,0	1/1:14,5:19:45:425,45,0	1/1:3,0:2:5.92:41,6,0	1/1:9,2:11:18.68:146,19,0	1/1:5,7:12:15.49:148,15,0	1/1:4,9:13:11.63:141,12,0	1/1:9,0:9:13.83:118,14,0	1/1:3,12:14:23.59:201,24,0	0/1:7,11:18:9.46:175,0,9	0/1:7,11:17:13.06:33,0,13
chr10	28506953	.	TC	T	3142.81	PASS	AB=1.000;AC=51;AF=0.911;AN=56;BaseQRankSum=-2.922;DP=511;FS=30.719;HRun=6;HaplotypeScore=72.7711;InbreedingCoeff=0.5643;MQ=53.55;MQ0=24;MQRankSum=1.518;QD=8.93;ReadPosRankSum=2.495;VQSLOD=0.0443;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:25,2:28:18.65:117,19,0	1/1:4,0:4:2.96:19,3,0	0/0:85,1:19:25.65:0,26,232	0/0:69,3:21:21.07:0,21,206	1/1:14,0:14:14.57:87,15,0	1/1:21,0:21:20.42:118,20,0	1/1:8,0:8:8.82:54,9,0	1/1:28,1:28:50.52:380,51,0	1/1:12,0:11:32.79:249,33,0	1/1:14,0:14:32.50:224,32,0	1/1:13,0:11:17.94:147,18,0	1/1:10,0:10:8.88:61,9,0	1/1:13,1:14:11.78:72,12,0	1/1:6,0:5:2.90:16,3,0	1/1:11,0:11:8.85:56,9,0	1/1:14,0:13:17.69:110,18,0	1/1:11,0:11:16.46:86,16,0	0/1:8,0:8:2.57:61,0,3	1/1:22,1:22:48.44:317,48,0	1/1:17,1:18:44.67:345,45,0	1/1:4,0:3:8.91:64,9,0	1/1:12,0:11:17.86:142,18,0	1/1:10,0:10:11.73:73,12,0	1/1:12,0:12:11.74:71,12,0	1/1:10,0:10:14.95:121,15,0	1/1:15,0:14:23.52:157,24,0	1/1:14,0:14:17.60:110,18,0	1/1:17,0:16:1.99:17,2,0
chr10	28507312	.	C	CA	2169.46	PASS	AB=0.715;AC=43;AF=0.768;AN=56;BaseQRankSum=0.408;DP=489;FS=0.000;HRun=17;HaplotypeScore=78.6008;InbreedingCoeff=-0.0541;MQ=75.11;MQ0=2;MQRankSum=-0.387;QD=4.82;ReadPosRankSum=-1.560;VQSLOD=1.1574;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,12:18:8.39:154,8,0	1/1:6,2:10:11.51:65,12,0	0/0:21,0:15:4.62:0,5,23	0/0:18,0:10:1.83:0,2,7	0/1:8,9:17:13.06:70,0,13	0/1:10,5:14:19.12:34,0,19	1/1:7,8:16:2.24:89,2,0	1/1:12,3:24:28.73:155,29,0	1/1:5,10:15:0.65:79,1,0	1/1:8,0:20:31.89:164,32,0	1/1:7,1:13:15.44:89,15,0	0/1:13,8:22:22.48:22,0,32	1/1:11,0:19:15.71:87,16,0	0/1:4,8:13:6.71:28,0,7	1/1:9,3:23:26.86:148,27,0	1/1:5,0:10:9.84:47,10,0	0/1:9,14:24:29.88:144,0,30	1/1:4,10:14:8.97:68,9,0	0/1:19,2:24:34.70:119,0,35	0/1:9,6:16:13.32:102,0,13	0/1:8,4:12:25.61:70,0,26	1/1:5,0:15:17.25:93,17,0	1/1:4,0:22:19.69:104,20,0	1/1:4,0:8:8.52:43,9,0	1/1:5,1:17:12.76:68,13,0	1/1:6,2:19:23.07:131,23,0	1/1:14,2:26:20.98:118,21,0	0/1:11,3:15:6.72:28,0,7
chr10	28507742	.	G	GA	342.92	PASS	AB=0.773;AC=5;AF=0.089;AN=56;BaseQRankSum=-3.823;DP=511;FS=2.609;HRun=12;HaplotypeScore=61.1050;InbreedingCoeff=0.1570;MQ=79.41;MQ0=0;MQRankSum=-0.767;QD=6.35;ReadPosRankSum=-0.557;VQSLOD=1.8819;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:61.81:0,62,454	0/1:8,1:9:12.25:12,0,77	0/0:25,0:21:16.33:0,16,159	0/0:12,0:12:9.12:0,9,62	0/0:17,0:21:36.84:0,37,251	0/0:28,0:29:70.48:0,70,500	0/0:15,0:16:37.77:0,38,266	0/1:18,4:22:73.92:74,0,159	0/0:18,0:18:35.73:0,36,262	0/0:19,1:22:13.59:0,14,242	0/0:21,0:21:41.57:0,42,296	0/0:11,0:12:22.85:0,23,159	0/0:15,1:16:6.55:0,7,208	0/0:20,0:21:35.99:0,36,247	0/0:16,0:20:45.82:0,46,316	0/0:21,0:21:23.48:0,23,302	0/1:3,8:12:35.68:175,0,36	1/1:2,7:11:1.12:190,1,0	0/0:22,1:26:30.51:0,31,352	0/0:21,0:22:40.72:0,41,288	0/0:18,0:21:34.78:0,35,243	0/0:7,0:8:19.90:0,20,136	0/0:14,0:14:35.76:0,36,260	0/0:19,0:21:45.77:0,46,318	0/0:18,0:20:22.62:0,23,311	0/0:14,0:15:25.32:0,25,167	0/0:14,0:18:38.88:0,39,258	0/0:10,0:10:29.83:0,30,219
chr10	28508439	.	A	AGCGCGCGCGC	1521.12	PASS	AB=1.000;AC=37;AF=0.771;AN=48;BaseQRankSum=-0.943;DP=362;FS=1.631;HRun=0;HaplotypeScore=245.4516;InbreedingCoeff=0.4059;MQ=64.04;MQ0=13;MQRankSum=1.603;QD=6.34;ReadPosRankSum=-0.170;VQSLOD=2.2185;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:21:1.74:74,2,0	1/1:11,0:11:2.21:7,2,0	./.	./.	1/1:25,0:25:2.15:24,2,0	1/1:8,0:13:6.02:233,6,0	1/1:24,0:23:20.88:375,21,0	./.	1/1:7,0:7:8.62:312,9,0	1/1:8,0:8:2.18:7,2,0	1/1:13,0:13:6.97:31,7,0	1/1:13,4:17:3.90:153,4,0	1/1:6,0:6:2.02:6,2,0	0/1:4,0:4:0:0,0,0	1/1:7,0:7:2.22:7,2,0	0/0:9,0:9:2.49:0,2,10	0/0:26,0:26:9.03:0,9,216	0/0:18,0:18:6.02:0,6,155	1/1:20,0:18:14.76:294,15,0	1/1:16,0:15:5.50:37,5,0	0/0:10,4:12:0.47:0,0,1	1/1:11,0:11:6.05:28,6,0	0/1:8,0:8:0:0,0,1	./.	1/1:7,0:7:4.07:12,4,0	1/1:11,0:11:6.88:22,7,0	1/1:9,0:9:4.87:13,5,0	0/1:1,0:1:0:0,0,0
chr10	28508449	.	CGCGCGTGTGTGT	C	291.01	PASS	AB=1.000;AC=5;AF=0.208;AN=24;BaseQRankSum=0.521;DP=221;FS=0.000;HRun=0;HaplotypeScore=98.9769;InbreedingCoeff=0.6966;MQ=56.80;MQ0=18;MQRankSum=-2.937;QD=4.69;ReadPosRankSum=1.793;VQSLOD=1.5213;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:11.63:0,12,369	./.	./.	0/1:15,0:5:0:0,0,0	0/0:13,0:13:8.61:0,9,201	0/0:16,0:14:12.49:0,12,275	0/0:26,0:24:40.05:0,40,1149	./.	0/0:9,0:9:12.04:0,12,481	./.	./.	0/0:15,0:15:19.29:0,19,509	./.	./.	./.	./.	1/1:4,24:27:9.50:267,10,0	1/1:2,17:19:2.59:114,3,0	0/0:18,0:16:36:0,36,695	0/0:11,0:10:12.03:0,12,224	0/0:18,0:15:14.68:0,15,658	./.	./.	./.	./.	./.	./.	./.
chr10	28510045	.	ATGTGTG	A	1189.68	PASS	AB=0.928;AC=33;AF=0.635;AN=52;BaseQRankSum=2.217;DP=558;FS=2.337;HRun=0;HaplotypeScore=118.2010;InbreedingCoeff=0.2542;MQ=58.79;MQ0=14;MQRankSum=-0.367;QD=2.97;ReadPosRankSum=1.692;VQSLOD=1.9337;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:33,13:46:11.14:54,0,11	1/1:7,0:7:2.04:6,2,0	./.	./.	1/1:23,0:23:15.17:128,15,0	1/1:19,9:28:3.01:60,3,0	1/1:21,1:23:20.72:238,21,0	0/0:20,0:20:2.92:0,3,8	1/1:19,1:21:11.34:201,11,0	0/1:21,0:20:1.35:1,0,18	0/0:16,0:14:5.61:0,6,51	1/1:17,0:19:2.50:24,3,0	1/1:5,1:6:3.89:62,4,0	1/1:17,0:16:3.01:49,3,0	1/1:9,0:12:2.66:6,3,0	1/1:4,4:8:3.01:60,3,0	0/1:30,0:30:2.29:2,0,54	0/0:16,0:16:2.99:0,3,24	1/1:16,1:18:6.02:102,6,0	1/1:13,7:20:6.02:121,6,0	0/1:48,0:49:73.24:73,0,100	1/1:10,5:13:3.01:60,3,0	0/0:12,0:12:11.93:0,12,104	0/1:18,0:20:41.35:54,0,41	1/1:12,0:14:3.30:33,3,0	0/0:20,0:20:9.62:0,10,78	0/0:15,0:15:1.20:0,1,18	0/0:6,0:7:0:0,0,0
chr10	28510604	.	AGG	A	6662.27	PASS	AB=0.795;AC=29;AF=0.518;AN=56;BaseQRankSum=4.545;DP=535;FS=8.978;HRun=7;HaplotypeScore=90.3865;InbreedingCoeff=0.8959;MQ=56.27;MQ0=36;MQRankSum=-0.749;QD=23.71;ReadPosRankSum=6.519;VQSLOD=2.6333;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:30:44.14:0,44,629	1/1:1,2:2:6.02:71,6,0	0/0:24,0:15:30.10:0,30,427	0/0:17,0:7:11.86:0,12,108	0/0:12,0:11:14.88:0,15,195	0/0:14,0:13:24.28:0,24,231	0/0:37,0:35:90.57:0,91,1251	0/1:23,6:26:4.67:393,0,5	0/0:7,0:6:11.96:0,12,137	1/1:5,13:17:38.46:458,38,0	1/1:2,10:12:18.03:226,18,0	0/0:19,0:17:29.78:0,30,352	1/1:9,11:18:33.58:517,34,0	1/1:3,19:21:48.09:562,48,0	1/1:3,14:18:5.48:276,5,0	1/1:17,19:36:82.55:1099,83,0	0/0:17,0:15:39.13:0,39,627	0/0:17,0:14:39.06:0,39,593	0/0:11,0:8:14.71:0,15,225	0/0:6,0:6:17.90:0,18,213	0/0:39,0:33:59.95:0,60,906	1/1:2,9:11:30.10:379,30,0	1/1:10,8:16:36.58:447,37,0	1/1:4,17:19:34.11:449,34,0	1/1:7,10:18:23.05:456,23,0	1/1:11,13:21:46.54:584,47,0	1/1:7,9:19:53.63:600,54,0	1/1:2,4:4:12.04:144,12,0
chr10	28510609	.	G	GA	1627.91	PASS	AB=0.918;AC=17;AF=0.304;AN=56;BaseQRankSum=2.819;DP=582;FS=12.891;HRun=0;HaplotypeScore=108.0950;InbreedingCoeff=-0.1423;MQ=51.73;MQ0=53;MQRankSum=-2.277;QD=5.30;ReadPosRankSum=0.644;VQSLOD=2.5139;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:33:35.77:0,36,585	1/1:3,0:2:4.74:17,5,0	0/0:25,0:12:30.10:0,30,412	0/0:17,0:6:11.39:0,11,110	0/0:14,0:13:14.96:0,15,200	0/0:18,0:16:24.50:0,24,295	0/0:37,0:35:90.54:0,91,1164	0/1:25,7:25:64.68:272,0,65	0/0:8,0:7:12.03:0,12,146	0/1:16,0:14:14.88:145,0,15	0/1:12,0:12:17.50:31,0,17	0/0:22,0:19:32.92:0,33,415	0/1:17,5:19:26.09:160,0,26	0/1:21,0:19:6.22:34,0,6	0/1:23,0:22:34.28:34,0,119	0/1:30,9:37:38.81:359,0,39	0/0:19,0:16:42.13:0,42,569	0/0:18,0:14:42.05:0,42,522	0/0:10,0:9:23.49:0,23,247	0/0:9,0:8:17.82:0,18,195	0/0:39,0:33:63.12:0,63,829	0/1:14,1:13:16.81:17,0,57	1/1:13,7:18:1.69:250,2,0	0/1:27,0:23:16.08:16,0,55	0/1:15,3:18:34.92:106,0,35	0/1:25,4:22:65.29:116,0,65	0/1:17,5:22:11.68:219,0,12	0/1:8,0:5:13.45:13,0,15
chr10	28512222	.	A	AGTGT	4099.30	PASS	AB=0.773;AC=51;AF=0.944;AN=54;BaseQRankSum=-2.024;DP=464;FS=1.709;HRun=0;HaplotypeScore=99.4676;InbreedingCoeff=-0.0551;MQ=62.85;MQ0=7;MQRankSum=0.415;QD=9.21;ReadPosRankSum=2.400;VQSLOD=2.2880;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,1:17:3.01:52,3,0	1/1:1,4:6:8.93:144,9,0	./.	0/1:33,0:20:0:0,0,0	1/1:12,11:25:23.82:488,24,0	0/1:7,10:21:30:211,0,30	1/1:10,8:19:10.85:217,11,0	1/1:28,0:27:17.24:112,17,0	1/1:3,6:15:20.01:262,20,0	1/1:14,0:14:9.03:147,9,0	1/1:8,0:15:2.71:54,3,0	1/1:5,0:5:3.01:71,3,0	1/1:7,2:9:5.05:77,5,0	1/1:3,0:10:3.01:52,3,0	1/1:5,1:6:5.23:78,5,0	1/1:10,0:14:3:28,3,0	1/1:15,3:20:2.20:129,2,0	1/1:18,1:18:14.87:140,15,0	1/1:19,0:22:20.91:208,21,0	0/1:14,8:23:37.93:65,0,38	1/1:14,0:13:12.49:164,12,0	1/1:1,0:4:6.02:104,6,0	1/1:4,0:15:3.01:52,3,0	1/1:14,0:14:0.08:122,0,0	1/1:23,0:23:18.05:244,18,0	1/1:11,0:23:28.34:409,28,0	1/1:13,0:26:24.08:417,24,0	1/1:2,0:2:3.01:52,3,0
chr10	28512415	.	A	AC	1172.66	PASS	AB=0.920;AC=16;AF=0.286;AN=56;BaseQRankSum=-2.003;DP=466;FS=10.639;HRun=0;HaplotypeScore=69.9313;InbreedingCoeff=0.4179;MQ=55.37;MQ0=17;MQRankSum=2.532;QD=6.14;ReadPosRankSum=3.943;VQSLOD=1.9206;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:25:18.50:60,0,19	0/0:5,0:4:8.68:0,9,68	0/0:45,0:12:31.31:0,31,251	0/0:29,0:8:10.83:0,11,97	0/1:12,3:15:23.72:133,0,24	1/1:17,0:16:16.05:96,16,0	0/1:15,1:16:42.49:147,0,42	0/0:30,0:30:23.40:0,23,378	1/1:21,0:20:17.02:174,17,0	0/0:22,0:21:48.22:0,48,383	0/0:20,0:18:46.27:0,46,351	1/1:9,0:9:11.43:74,11,0	0/0:10,0:10:29.06:0,29,213	0/0:9,0:9:23.69:0,24,200	0/0:14,0:14:18.71:0,19,220	0/0:15,0:15:31.25:0,31,277	0/1:9,1:10:15.53:71,0,16	1/1:18,0:18:35.44:179,35,0	0/1:27,2:27:59.62:218,0,60	0/1:16,2:18:12.34:149,0,12	1/1:11,1:12:7.48:53,7,0	0/0:5,0:5:14.65:0,15,113	0/0:10,0:9:12.26:0,12,200	0/0:7,0:7:5.81:0,6,37	0/0:13,0:12:21:0,21,190	0/0:19,0:19:51.91:0,52,409	0/0:17,0:17:29.95:0,30,268	0/0:5,0:4:11.22:0,11,88
chr10	28515550	.	AGAAG	A	3911.15	PASS	AB=0.780;AC=43;AF=0.935;AN=46;BaseQRankSum=2.583;DP=674;FS=3.185;HRun=0;HaplotypeScore=121.6394;InbreedingCoeff=0.3853;MQ=59.70;MQ0=2;MQRankSum=-0.435;QD=7.07;ReadPosRankSum=0.680;VQSLOD=2.7931;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:30,12:42:21.07:317,21,0	1/1:5,0:11:8.40:83,8,0	./.	./.	1/1:14,3:17:9.03:136,9,0	0/0:17,0:17:18:0,18,407	1/1:27,5:32:3.01:45,3,0	./.	1/1:22,9:31:21.07:317,21,0	0/1:23,0:31:2.67:148,0,3	1/1:12,0:21:6.01:56,6,0	1/1:19,6:25:15.05:227,15,0	1/1:14,8:22:15.05:227,15,0	1/1:16,0:26:9.80:132,10,0	1/1:22,0:32:21.02:195,21,0	1/1:19,9:28:17.34:271,17,0	1/1:25,11:36:13.73:349,14,0	1/1:10,5:15:15.05:226,15,0	1/1:16,5:21:12.04:181,12,0	1/1:23,4:27:12.01:157,12,0	1/1:20,11:31:21.07:317,21,0	1/1:20,0:33:18.49:168,18,0	./.	./.	1/1:10,0:17:12.01:111,12,0	1/1:13,0:17:5.50:34,5,0	1/1:23,0:34:21.39:185,21,0	1/1:1,0:2:3:28,3,0
chr10	28515742	.	A	AT	7776.53	PASS	AB=1.000;AC=31;AF=0.554;AN=56;BaseQRankSum=-10.862;DP=620;FS=3.829;HRun=10;HaplotypeScore=65.2141;InbreedingCoeff=0.9033;MQ=71.73;MQ0=0;MQRankSum=0.076;QD=23.21;ReadPosRankSum=0.101;VQSLOD=5.6016;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:95.87:0,96,788	1/1:0,10:10:24.06:256,24,0	0/0:21,0:18:36.25:0,36,282	0/1:14,0:14:32.80:33,0,69	0/0:28,0:28:71.80:0,72,595	0/0:24,0:24:65.86:0,66,535	0/0:24,0:24:28.45:0,28,372	1/1:11,31:43:31.68:910,32,0	0/0:17,0:18:40.97:0,41,326	1/1:5,27:32:56.53:797,57,0	1/1:2,16:18:48.12:512,48,0	0/0:22,0:22:47.89:0,48,388	1/1:2,17:19:48.12:512,48,0	1/1:1,15:16:42.11:447,42,0	1/1:4,21:25:35.51:583,36,0	1/1:3,20:23:29.49:519,29,0	0/0:22,0:22:50.91:0,51,415	0/0:24,0:24:59.82:0,60,479	0/0:17,0:17:38.91:0,39,320	0/0:26,0:26:62.91:0,63,517	0/0:21,0:21:50.92:0,51,416	1/1:4,15:19:44.99:451,45,0	1/1:4,18:22:45.11:477,45,0	1/1:2,17:19:48.12:512,48,0	1/1:2,11:13:33.08:352,33,0	1/1:3,22:25:63.06:639,63,0	1/1:3,26:30:72.09:747,72,0	1/1:5,2:6:3.01:32,3,0
chr10	28518370	.	C	CTATCTA	4388.19	PASS	AB=0.959;AC=25;AF=0.463;AN=54;BaseQRankSum=8.689;DP=587;FS=15.380;HRun=0;HaplotypeScore=168.7256;InbreedingCoeff=0.1527;MQ=59.24;MQ0=8;MQRankSum=-9.844;QD=13.06;ReadPosRankSum=3.152;VQSLOD=3.2248;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:3,20:28:21.07:707,21,0	0/1:8,0:8:6.49:6,0,180	0/0:26,0:13:11.40:0,11,190	0/0:40,0:17:20.15:0,20,420	1/1:2,20:25:9.02:304,9,0	1/1:2,11:13:15.05:502,15,0	0/1:3,14:18:23.81:219,0,24	0/0:39,0:38:96.27:0,96,1565	1/1:1,15:16:18.06:608,18,0	0/0:17,0:17:33.66:0,34,678	0/1:21,0:21:63.11:63,0,386	1/1:1,14:19:27.09:911,27,0	0/1:22,0:22:27.64:28,0,586	0/1:21,0:21:60.31:60,0,479	0/1:18,0:18:26.58:27,0,253	0/1:20,0:20:15.89:16,0,413	0/0:27,0:27:62.75:0,63,805	0/0:18,0:17:35.71:0,36,482	1/1:0,8:12:36.05:625,36,0	1/1:28,0:29:14.94:160,15,0	./.	0/1:18,0:18:38.95:39,0,527	0/1:21,0:21:17.72:18,0,449	0/1:9,0:9:12.76:13,0,107	0/1:18,0:18:82.21:82,0,242	0/0:24,0:23:46.63:0,47,995	0/0:38,0:37:2.08:0,2,1019	0/0:13,0:13:33.98:0,34,551
chr10	28518374	.	C	CTATCTA	4282.83	PASS	AB=0.994;AC=27;AF=0.500;AN=54;BaseQRankSum=9.065;DP=581;FS=12.321;HRun=0;HaplotypeScore=173.9673;InbreedingCoeff=0.0571;MQ=57.12;MQ0=8;MQRankSum=-10.728;QD=11.01;ReadPosRankSum=6.722;VQSLOD=2.2590;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:29:21.07:707,21,0	0/1:8,0:8:3.63:4,0,190	0/1:23,0:11:4.82:5,0,133	0/0:45,0:20:14.01:0,14,423	1/1:22,0:22:9.02:304,9,0	1/1:12,0:12:15.05:500,15,0	0/1:16,0:16:23.81:216,0,24	0/0:39,0:38:99:0,105,1586	1/1:17,0:17:18.06:607,18,0	0/0:18,0:18:50.75:0,51,810	0/1:20,0:20:67.12:67,0,363	1/1:16,0:16:27.09:911,27,0	0/1:21,0:21:29.80:30,0,563	0/1:21,0:21:59.69:60,0,480	0/1:15,0:15:35.62:36,0,188	0/1:20,0:20:16.80:17,0,366	0/0:28,0:28:59.71:0,60,703	0/0:19,0:18:35.63:0,36,413	1/1:11,0:11:20.33:527,20,0	1/1:4,25:31:5.98:123,6,0	./.	0/1:21,0:21:39.03:39,0,478	0/1:21,0:21:23.71:24,0,380	0/1:9,0:9:12.85:13,0,108	0/1:18,0:18:82.34:82,0,207	0/0:22,0:21:43.62:0,44,907	0/1:36,0:35:10.85:11,0,929	0/0:13,0:13:34.33:0,34,529
chr10	28518382	.	C	CTA	2811.97	PASS	AB=0.958;AC=33;AF=0.611;AN=54;BaseQRankSum=10.442;DP=559;FS=48.301;HRun=0;HaplotypeScore=152.3798;InbreedingCoeff=-0.4377;MQ=55.27;MQ0=7;MQRankSum=-4.367;QD=5.56;ReadPosRankSum=4.477;VQSLOD=1.4983;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:30:21.04:221,21,0	0/1:8,0:8:33.16:33,0,93	0/1:23,0:8:0.01:0,0,68	0/0:42,0:17:6.98:0,7,179	1/1:23,0:23:11.06:100,11,0	1/1:10,0:10:15.04:161,15,0	0/1:14,0:14:3.04:91,0,3	0/1:34,0:33:99:259,0,347	1/1:16,0:16:23.98:242,24,0	0/1:20,0:20:99:215,0,293	0/1:21,0:21:74.60:75,0,183	1/1:16,0:16:27.07:284,27,0	0/1:21,0:21:49.81:50,0,189	0/1:20,0:20:83.51:84,0,188	0/1:16,0:16:16.91:17,0,78	0/1:19,0:19:99:149,0,126	0/1:18,0:25:50.10:76,0,50	0/1:15,0:17:18.97:19,0,161	1/1:11,0:11:27.44:284,27,0	1/1:26,0:26:9.01:106,9,0	./.	0/1:20,0:20:67.81:68,0,189	0/1:21,0:21:83.11:83,0,158	0/1:9,0:9:36.15:45,0,36	0/1:16,4:20:63.89:101,0,64	0/1:16,0:15:99:107,0,249	0/1:25,14:39:47.64:48,0,497	0/1:10,0:10:55.12:55,0,162
chr10	28518386	.	C	CTATCTA	11193.29	PASS	AB=0.924;AC=34;AF=0.630;AN=54;BaseQRankSum=3.147;DP=567;FS=33.191;HRun=0;HaplotypeScore=157.9209;InbreedingCoeff=-0.2242;MQ=55.51;MQ0=7;MQRankSum=-4.001;QD=21.73;ReadPosRankSum=5.128;VQSLOD=2.6989;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:29:21.06:651,21,0	0/1:9,0:9:59.61:115,0,60	0/1:25,0:9:9.28:9,0,77	0/1:37,0:15:5.78:6,0,279	1/1:24,0:24:15.02:354,15,0	1/1:10,0:10:18.06:603,18,0	1/1:12,0:12:12:264,12,0	0/1:34,0:33:99:694,0,128	1/1:16,0:16:27.08:717,27,0	0/1:22,0:22:99:538,0,165	0/1:9,12:21:67.09:420,0,67	1/1:17,0:17:33.08:964,33,0	0/1:21,0:21:99:463,0,131	0/1:23,0:23:99:696,0,130	0/1:6,12:19:41.80:183,0,42	1/1:19,0:19:28.82:807,29,0	0/0:22,0:22:41.68:0,42,398	0/0:19,0:18:41.76:0,42,517	1/1:15,0:15:42:744,42,0	1/1:25,0:25:14.97:219,15,0	./.	0/1:9,10:21:99:247,0,185	0/1:23,0:23:49.66:491,0,50	0/1:9,0:9:10.13:119,0,10	0/1:19,0:21:3.50:661,0,4	0/1:15,0:14:99:340,0,156	0/1:40,0:40:99:767,0,329	0/1:8,0:8:99:119,0,113
chr10	28518388	.	C	CTA	1654.27	PASS	AB=0.937;AC=27;AF=0.500;AN=54;BaseQRankSum=10.308;DP=560;FS=3.895;HRun=0;HaplotypeScore=162.8745;InbreedingCoeff=-0.2775;MQ=56.73;MQ0=6;MQRankSum=-4.659;QD=3.52;ReadPosRankSum=6.961;VQSLOD=2.3058;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:29:8.28:52,8,0	0/1:7,1:8:19.32:19,0,47	0/1:23,0:8:2.92:3,0,55	0/1:36,0:16:3.31:3,0,131	0/1:24,0:24:15.96:20,0,16	1/1:10,0:10:12.90:51,13,0	0/1:12,0:12:0.83:7,0,1	0/0:35,0:34:37.17:0,37,243	0/1:16,0:16:7.16:42,0,7	0/1:22,0:22:65.64:126,0,66	0/1:20,2:22:26.01:128,0,26	1/1:17,0:17:13.04:85,13,0	0/1:17,4:21:57.21:134,0,57	0/1:18,4:23:95.73:152,0,96	0/1:19,1:20:6.21:54,0,6	0/1:16,4:20:0.92:201,0,1	0/0:20,0:20:29.72:0,30,181	0/0:18,0:17:37.52:0,38,240	0/1:15,0:15:38.31:38,0,53	0/1:27,0:27:8.88:9,0,27	./.	0/1:19,1:20:63.60:64,0,81	0/1:18,3:21:60.36:68,0,60	0/1:8,1:9:9.98:23,0,10	1/1:15,6:21:21.03:280,21,0	0/1:13,1:13:50.34:50,0,65	0/1:35,5:40:99:204,0,198	0/0:6,0:6:5.32:0,5,61
chr10	28518390	.	C	CTATCTA	13398.70	PASS	AB=0.917;AC=43;AF=0.796;AN=54;BaseQRankSum=0.235;DP=563;FS=18.946;HRun=0;HaplotypeScore=152.3538;InbreedingCoeff=-0.1109;MQ=58.62;MQ0=6;MQRankSum=-3.500;QD=24.23;ReadPosRankSum=6.149;VQSLOD=3.2077;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:29:21.53:654,22,0	0/1:7,1:8:5.59:162,0,6	0/1:24,0:9:2.16:2,0,44	0/1:38,0:18:2.81:3,0,283	1/1:24,0:24:18.04:427,18,0	1/1:11,0:11:18.06:604,18,0	1/1:12,0:12:6.80:262,7,0	1/1:38,0:37:41.50:1051,41,0	1/1:16,0:16:27.09:742,27,0	0/1:20,0:20:55.88:581,0,56	1/1:20,2:22:2.57:522,3,0	1/1:17,0:17:33.11:1013,33,0	0/1:16,3:20:6.98:571,0,7	1/1:18,4:23:14.99:844,15,0	1/1:20,1:21:11.58:305,12,0	1/1:16,4:20:37.94:937,38,0	0/1:14,0:21:0.53:194,0,1	0/1:15,0:17:43.09:91,0,43	1/1:17,0:17:42.11:835,42,0	1/1:27,0:27:21:318,21,0	./.	0/1:19,1:20:52.29:268,0,52	1/1:17,3:20:22.05:643,22,0	1/1:8,1:9:7.68:146,8,0	1/1:17,6:23:8.43:768,8,0	0/1:10,1:10:8.58:375,0,9	0/1:33,5:38:70.75:955,0,71	0/1:6,0:6:5.96:126,0,6
chr10	28518399	.	T	TCTAT	9017.25	PASS	AB=1.000;AC=51;AF=0.944;AN=54;BaseQRankSum=2.034;DP=563;FS=1.512;HRun=0;HaplotypeScore=152.4068;InbreedingCoeff=0.3691;MQ=62.32;MQ0=4;MQRankSum=-1.232;QD=17.11;ReadPosRankSum=1.237;VQSLOD=4.7457;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:31,0:31:21.05:333,21,0	1/1:8,0:8:11.95:120,12,0	0/0:26,0:12:2.43:0,2,21	0/1:29,0:20:34.72:35,0,139	1/1:21,0:21:18.01:228,18,0	1/1:12,0:12:15.05:256,15,0	1/1:15,0:15:12.01:149,12,0	1/1:38,0:37:80.63:647,81,0	1/1:16,0:16:27:376,27,0	1/1:18,0:18:41.08:424,41,0	1/1:21,0:21:26.89:361,27,0	1/1:19,0:19:33.09:516,33,0	1/1:17,0:17:29.95:345,30,0	1/1:21,0:21:41.95:505,42,0	1/1:24,0:24:18.02:237,18,0	1/1:21,0:21:45.09:617,45,0	1/1:18,5:24:38.95:670,39,0	1/1:17,0:16:35.93:472,36,0	1/1:18,0:18:41.56:388,42,0	1/1:30,0:30:20.89:192,21,0	./.	1/1:21,0:21:12.03:191,12,0	1/1:20,0:20:35.91:373,36,0	1/1:9,0:9:9:101,9,0	1/1:22,0:22:33.07:524,33,0	1/1:11,0:10:20.95:250,21,0	1/1:38,0:38:47.89:627,48,0	1/1:6,0:6:8.91:82,9,0
chr10	28518404	.	C	CTATCTATC	15018.38	PASS	AB=1.000;AC=51;AF=0.944;AN=54;BaseQRankSum=-1.981;DP=575;FS=0.000;HRun=0;HaplotypeScore=171.2553;InbreedingCoeff=0.5713;MQ=65.13;MQ0=3;MQRankSum=-2.260;QD=27.86;ReadPosRankSum=1.940;VQSLOD=4.5204;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:30:21.33:468,21,0	1/1:8,0:8:12.03:233,12,0	0/0:26,0:13:2.62:0,3,49	0/1:29,0:22:0.72:1,0,280	1/1:23,0:23:17.98:326,18,0	1/1:13,0:13:18.06:429,18,0	1/1:14,0:14:12.03:230,12,0	1/1:41,0:41:81.12:1139,81,0	1/1:16,0:16:27.09:553,27,0	1/1:4,13:18:45.13:823,45,0	1/1:21,0:21:27.06:628,27,0	1/1:20,0:20:33.11:711,33,0	1/1:18,0:18:33.08:817,33,0	1/1:21,0:21:42.13:1192,42,0	1/1:24,0:24:18.02:332,18,0	1/1:21,0:21:45.14:1256,45,0	1/1:24,0:24:12.02:177,12,0	1/1:20,0:19:12.84:98,13,0	1/1:19,0:19:41.93:658,42,0	1/1:30,0:30:20.07:271,20,0	./.	1/1:20,0:20:12.03:332,12,0	1/1:20,0:20:36.11:852,36,0	1/1:9,0:9:9.48:198,9,0	1/1:25,0:25:35.58:1067,36,0	1/1:12,0:11:21.06:482,21,0	1/1:40,0:40:54.17:1607,54,0	1/1:3,0:3:9.03:140,9,0
chr10	28518568	.	TA	T	2909.67	PASS	AB=0.660;AC=48;AF=0.857;AN=56;BaseQRankSum=-0.695;DP=499;FS=2.561;HRun=15;HaplotypeScore=63.7903;InbreedingCoeff=0.3180;MQ=66.83;MQ0=1;MQRankSum=-0.870;QD=6.09;ReadPosRankSum=2.705;VQSLOD=2.7252;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,0:20:28.50:82,29,0	1/1:5,3:8:7.12:41,7,0	0/0:10,0:7:1.66:0,2,43	0/0:11,0:10:8.87:0,9,76	1/1:13,0:29:22.16:64,22,0	1/1:8,1:22:23.21:78,23,0	1/1:2,2:13:23.51:90,24,0	0/1:11,11:23:11.95:175,0,12	1/1:4,0:14:16.23:47,16,0	1/1:11,9:20:26.53:173,27,0	1/1:3,14:18:32.35:211,32,0	1/1:6,0:11:10.12:29,10,0	1/1:8,8:15:11.69:77,12,0	1/1:7,11:18:23.52:154,24,0	1/1:8,10:21:35.55:210,36,0	1/1:12,8:21:24.38:146,24,0	1/1:7,7:15:19.59:121,20,0	1/1:9,11:20:26.35:173,26,0	1/1:3,0:10:11.20:33,11,0	1/1:5,0:20:33.48:107,33,0	1/1:1,0:3:4.06:12,4,0	1/1:11,4:20:20.64:113,21,0	0/1:12,12:25:1.20:114,0,1	0/1:4,7:13:4.54:86,0,5	1/1:4,16:21:28.55:179,29,0	1/1:10,15:25:36.78:233,37,0	1/1:12,18:31:28.40:179,28,0	0/1:13,6:20:10.38:112,0,10
chr10	28518991	.	CCTT	C	6833.20	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=12.778;DP=567;FS=5.602;HRun=0;HaplotypeScore=82.8226;InbreedingCoeff=0.9966;MQ=83.47;MQ0=0;MQRankSum=-3.605;QD=35.41;ReadPosRankSum=2.115;VQSLOD=5.3592;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,32:38:81.28:1321,81,0	0/0:13,0:13:39.11:0,39,826	0/0:19,0:19:57.19:0,57,1142	0/0:17,0:16:36.09:0,36,679	1/1:1,17:18:36.08:558,36,0	1/1:3,11:14:30.10:490,30,0	1/1:1,22:23:57.19:930,57,0	0/0:29,0:29:75.26:0,75,1640	1/1:0,20:20:48.16:779,48,0	0/0:15,0:15:42.14:0,42,900	0/0:12,0:12:36.12:0,36,803	1/1:1,16:17:42.14:685,42,0	0/0:26,0:26:78.27:0,78,1694	0/0:21,0:21:60.21:0,60,1290	0/0:26,0:26:72.18:0,72,1545	0/0:16,0:16:42.14:0,42,921	0/0:36,0:35:99:0,102,2237	0/0:24,0:24:72.22:0,72,1564	1/1:2,22:24:63.05:945,63,0	1/1:0,8:8:21.07:343,21,0	1/1:3,28:30:47.93:783,48,0	0/0:16,0:16:45.15:0,45,989	0/0:11,0:11:30.10:0,30,670	0/0:25,0:25:75.26:0,75,1640	0/0:15,0:15:45.15:0,45,988	0/0:19,0:19:54.17:0,54,1166	0/0:29,0:29:87.30:0,87,1901	0/0:5,0:5:15.05:0,15,310
chr10	28520076	.	C	CA	1240.89	PASS	AB=0.923;AC=7;AF=0.125;AN=56;BaseQRankSum=-6.894;DP=642;FS=8.651;HRun=11;HaplotypeScore=68.3220;InbreedingCoeff=0.4222;MQ=70.29;MQ0=0;MQRankSum=1.112;QD=10.70;ReadPosRankSum=-0.078;VQSLOD=2.4030;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,4:46:56.29:0,56,785	0/0:11,1:12:2.44:0,2,202	0/1:8,1:9:17.22:18,0,17	0/0:10,0:10:4.53:0,5,28	0/1:19,2:21:16.11:16,0,237	0/0:16,0:17:46.87:0,47,354	0/0:37,1:38:53.18:0,53,593	0/0:24,0:25:33.47:0,33,398	0/0:22,0:24:18.20:0,18,263	0/0:21,0:21:44.77:0,45,347	0/0:19,0:20:34.87:0,35,261	0/0:26,0:27:64.78:0,65,493	0/0:23,0:23:53.70:0,54,413	0/0:18,0:18:40.85:0,41,308	0/0:26,0:28:63.76:0,64,476	0/0:23,0:25:52.80:0,53,401	1/1:9,25:35:71.58:869,72,0	1/1:7,22:29:11.07:461,11,0	0/0:11,0:11:23.90:0,24,185	0/0:20,1:21:35.81:0,36,276	0/0:25,0:26:34.36:0,34,440	0/0:22,3:26:34.77:0,35,259	0/0:20,1:22:31.91:0,32,375	0/0:23,0:23:58.77:0,59,445	0/0:30,0:33:71.77:0,72,528	0/1:20,1:22:14.08:14,0,261	0/0:26,1:27:44.24:0,44,523	0/0:1,0:2:5.03:0,5,29
chr10	28521001	.	G	GAGGGAAGGAAGGA	37250.66	PASS	AB=0.588;AC=51;AF=0.911;AN=56;BaseQRankSum=-3.121;DP=609;FS=9.894;HRun=0;HaplotypeScore=167.4571;InbreedingCoeff=0.7385;MQ=61.03;MQ0=1;MQRankSum=-6.832;QD=68.60;ReadPosRankSum=6.427;VQSLOD=3.1686;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,21:33:51.16:3007,51,0	1/1:0,0:7:9.03:282,9,0	0/0:29,0:22:14.31:0,14,1087	0/0:37,0:27:40.59:0,41,1342	1/1:0,17:28:42.10:2149,42,0	1/1:1,11:16:24.08:1577,24,0	1/1:2,10:21:18.06:1104,18,0	1/1:3,0:20:51.62:1434,52,0	1/1:2,15:24:26.70:1770,27,0	1/1:0,0:23:57.19:1593,57,0	1/1:1,0:15:27.05:731,27,0	1/1:1,15:28:39.61:2559,40,0	1/1:2,0:29:59.79:1807,60,0	1/1:2,0:26:42.14:1326,42,0	1/1:3,0:17:24.08:752,24,0	1/1:0,0:27:57.20:1785,57,0	1/1:2,13:22:27.04:1425,27,0	0/1:3,5:10:14.60:771,0,15	1/1:4,6:21:57.16:2267,57,0	1/1:0,14:17:33.11:2031,33,0	1/1:3,8:21:21.07:1208,21,0	1/1:2,0:25:48.12:1484,48,0	1/1:1,0:22:42.14:1349,42,0	1/1:3,0:21:24.08:705,24,0	1/1:2,0:13:21.07:671,21,0	1/1:2,0:28:78.26:2291,78,0	1/1:3,0:16:29.84:855,30,0	1/1:1,0:11:12.01:315,12,0
chr10	28521227	.	GCACACACACACA	G	4871.29	PASS	AB=0.816;AC=24;AF=0.444;AN=54;BaseQRankSum=2.939;DP=728;FS=1.109;HRun=0;HaplotypeScore=237.8732;InbreedingCoeff=0.4519;MQ=53.08;MQ0=26;MQRankSum=-5.247;QD=12.92;ReadPosRankSum=-2.454;VQSLOD=3.4905;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:21,22:43:0.10:425,0,0	0/0:4,0:5:7.04:0,7,137	./.	0/0:47,0:17:3.48:0,3,60	1/1:9,12:22:18.02:451,18,0	1/1:8,11:19:12.65:466,13,0	1/1:21,9:31:15.05:452,15,0	1/1:32,0:32:3:54,3,0	1/1:21,13:34:30.09:996,30,0	0/1:15,0:21:21.24:21,0,102	0/0:9,0:14:12.01:0,12,146	1/1:16,12:29:32.39:1022,32,0	0/0:13,0:27:39.06:0,39,543	0/0:15,0:22:34.02:0,34,571	0/0:23,0:37:46.91:0,47,748	0/0:19,0:27:9.64:0,10,653	0/0:21,0:39:71.06:0,71,1832	0/0:10,0:15:24.08:0,24,658	0/1:13,5:18:26.54:310,0,27	1/1:10,8:18:9.47:311,9,0	1/1:30,13:41:6.49:144,6,0	0/0:15,0:21:32.07:0,32,492	0/0:5,0:12:9.03:0,9,119	0/0:24,0:33:19.15:0,19,278	0/1:17,0:17:22.02:22,0,63	0/1:19,1:18:87.46:87,0,157	0/1:15,1:23:53.15:106,0,53	1/1:0,0:2:1.55:4,2,0
chr10	28521608	.	A	AACACACACACACAC	14035.62	PASS	AB=0.893;AC=49;AF=0.875;AN=56;BaseQRankSum=-0.380;DP=618;FS=0.000;HRun=0;HaplotypeScore=262.4642;InbreedingCoeff=0.5309;MQ=60.48;MQ0=6;MQRankSum=1.490;QD=26.43;ReadPosRankSum=1.920;VQSLOD=3.1538;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:41,0:38:2.05:158,2,0	0/0:6,0:6:0.47:0,0,1	0/0:40,0:23:8.84:0,9,77	0/0:41,0:26:5.87:0,6,74	0/1:22,1:25:0.09:0,0,0	1/1:22,0:24:24.08:1287,24,0	1/1:29,0:26:16.51:581,17,0	1/1:19,0:23:27.08:839,27,0	1/1:17,0:17:24.08:1079,24,0	1/1:34,0:34:41.57:1224,42,0	1/1:8,2:11:2.83:201,3,0	1/1:23,0:24:11.70:435,12,0	1/1:15,0:16:14.84:693,15,0	1/1:21,0:21:12.04:379,12,0	1/1:23,0:22:11.85:559,12,0	1/1:15,1:18:9.03:603,9,0	1/1:18,0:18:6.87:159,7,0	1/1:10,0:10:9.03:368,9,0	1/1:20,0:15:9.03:335,9,0	1/1:20,0:20:9.02:256,9,0	1/1:24,0:26:9.29:287,9,0	1/1:15,0:16:3.01:117,3,0	1/1:16,0:16:9.03:299,9,0	1/1:18,0:22:12.52:538,13,0	1/1:15,0:21:24.08:1073,24,0	1/1:23,0:27:39.12:1440,39,0	1/1:18,0:17:20.84:668,21,0	1/1:8,0:8:20.30:457,20,0
chr10	28521637	.	A	ACACACACACACG	6843.81	PASS	AB=1.000;AC=27;AF=0.482;AN=56;BaseQRankSum=9.003;DP=665;FS=68.391;HRun=0;HaplotypeScore=245.4659;InbreedingCoeff=-0.6899;MQ=56.76;MQ0=7;MQRankSum=-7.605;QD=11.62;ReadPosRankSum=2.115;VQSLOD=1.2547;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:32,0:29:15.47:249,0,15	0/0:4,0:4:3.47:0,3,26	0/0:35,0:20:53.07:0,53,630	0/0:37,0:20:56.80:0,57,545	0/1:31,0:31:99:102,0,171	0/1:26,0:26:81.62:82,0,148	0/1:27,0:24:99:270,0,146	0/1:30,0:30:99:490,0,450	0/1:16,0:16:99:200,0,104	0/1:43,0:43:99:1171,0,497	0/1:14,0:14:99:111,0,165	0/1:25,0:24:99:361,0,174	0/1:17,0:17:99:184,0,196	0/1:22,0:22:80.59:81,0,119	0/1:27,0:26:99:104,0,192	0/1:20,0:20:99:251,0,120	1/1:6,11:24:12.93:423,13,0	1/1:1,11:16:3.01:186,3,0	0/1:27,0:21:99:512,0,266	0/1:23,0:21:13.68:14,0,145	0/1:25,0:24:99:129,0,99	0/1:24,0:24:68.51:69,0,142	0/1:21,0:21:78.08:78,0,164	0/1:20,0:18:99:125,0,119	0/1:19,0:19:71.77:406,0,72	0/1:32,0:32:99:1118,0,258	0/1:17,0:15:64.75:87,0,65	0/1:11,0:11:41.39:41,0,81
chr10	28522674	.	T	TGC	29460.42	PASS	AB=1.000;AC=53;AF=0.946;AN=56;BaseQRankSum=-9.012;DP=827;FS=2.183;HRun=0;HaplotypeScore=85.7515;InbreedingCoeff=0.8390;MQ=74.82;MQ0=3;MQRankSum=-6.779;QD=36.73;ReadPosRankSum=7.056;VQSLOD=6.6994;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,38:42:87.30:1502,87,0	1/1:3,8:11:27.09:446,27,0	0/1:30,0:30:0.29:0,0,611	0/0:25,0:23:35.48:0,35,533	1/1:1,21:22:54.18:933,54,0	1/1:0,19:19:48.16:830,48,0	1/1:5,32:38:75.26:1297,75,0	1/1:7,27:34:81.25:1328,81,0	1/1:5,28:33:75.26:1297,75,0	1/1:7,32:40:93.29:1600,93,0	1/1:2,17:19:33.11:571,33,0	1/1:6,31:37:87.30:1488,87,0	1/1:9,29:40:84.29:1437,84,0	1/1:4,35:38:84.29:1451,84,0	1/1:8,27:34:69.24:1193,69,0	1/1:6,18:24:54.18:935,54,0	1/1:1,34:35:72.25:1246,72,0	1/1:1,21:22:45.15:779,45,0	1/1:5,25:30:75.19:1221,75,0	1/1:3,11:14:33.11:568,33,0	1/1:9,61:70:99:2843,166,0	1/1:5,16:21:45.15:766,45,0	1/1:5,20:25:51.17:881,51,0	1/1:3,26:29:63.22:1090,63,0	1/1:1,31:32:84.29:1454,84,0	1/1:5,26:31:80.98:1270,81,0	1/1:1,17:17:39.13:674,39,0	1/1:4,8:12:21.07:364,21,0
chr10	28524471	.	GCCCCAGTTCTCAA	G	12928.25	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=14.027;DP=519;FS=4.990;HRun=0;HaplotypeScore=175.0853;InbreedingCoeff=0.9467;MQ=63.39;MQ0=18;MQRankSum=-13.802;QD=63.37;ReadPosRankSum=2.083;VQSLOD=4.4908;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:31:87.30:0,87,5362	1/1:1,3:4:6.02:216,6,0	0/0:17,0:17:51.15:0,51,2543	0/0:28,0:23:65.98:0,66,3321	0/0:21,0:21:54.19:0,54,3466	0/0:22,0:22:51.18:0,51,3309	0/0:21,0:21:60.21:0,60,3607	1/1:2,14:11:27:738,27,0	0/0:17,0:16:48.16:0,48,2931	1/1:1,13:13:39.11:1416,39,0	1/1:5,16:19:33.11:1270,33,0	0/0:13,0:13:36.12:0,36,2385	1/1:2,9:9:27.09:1087,27,0	1/1:2,8:10:21.07:846,21,0	1/1:3,16:18:30.10:1208,30,0	1/1:2,12:11:27.09:1088,27,0	0/0:33,0:32:80.96:0,81,4893	0/0:10,0:10:18.06:0,18,1194	0/0:24,0:18:48.16:0,48,3007	0/0:14,0:14:39.09:0,39,2015	0/0:60,0:58:99:0,144,8805	1/1:2,6:7:6.02:242,6,0	1/1:4,10:14:21:743,21,0	1/1:4,12:16:14.97:500,15,0	1/1:4,17:21:7.19:1205,7,0	1/1:5,11:15:30.03:938,30,0	1/1:4,13:12:27.09:1087,27,0	1/1:0,3:3:9.03:344,9,0
chr10	28526860	.	T	TC	1560.74	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-7.994;DP=707;FS=0.586;HRun=4;HaplotypeScore=73.5473;InbreedingCoeff=0.9975;MQ=79.09;MQ0=0;MQRankSum=-0.290;QD=30.60;ReadPosRankSum=1.823;VQSLOD=4.0007;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,153,1721	0/0:8,0:8:21.06:0,21,238	0/0:20,0:20:36.12:0,36,482	0/0:23,0:23:48.13:0,48,544	0/0:26,0:26:66.19:0,66,747	0/0:30,0:30:84.24:0,84,953	0/0:31,0:31:90.24:0,90,1011	0/0:22,0:22:42.12:0,42,475	0/0:21,0:21:60.17:0,60,680	0/0:29,0:29:72.18:0,72,797	0/0:16,0:16:44.94:0,45,501	0/0:24,0:24:66.18:0,66,743	0/0:17,0:17:45.13:0,45,510	0/0:23,0:23:63.18:0,63,715	0/0:33,0:33:93.25:0,93,1044	0/0:31,0:31:90.24:0,90,1008	1/1:2,28:30:81.27:1108,81,0	1/1:4,17:21:42.05:574,42,0	0/0:25,0:25:60.16:0,60,671	0/0:27,0:27:69.20:0,69,781	0/0:34,0:34:93.23:0,93,1033	0/0:25,0:25:69.20:0,69,782	0/0:19,0:19:48.14:0,48,544	0/0:24,0:24:69.20:0,69,782	0/0:25,0:25:72.21:0,72,816	0/0:29,0:29:84.24:0,84,952	0/0:27,0:27:75.20:0,75,840	0/0:12,0:12:30.09:0,30,340
chr10	28527698	.	CG	C	693.41	PASS	AB=0.800;AC=24;AF=0.444;AN=54;BaseQRankSum=-3.993;DP=158;FS=2.270;HRun=6;HaplotypeScore=37.7404;InbreedingCoeff=0.6216;MQ=98.52;MQ0=1;MQRankSum=-1.177;QD=12.17;ReadPosRankSum=-1.084;VQSLOD=1.0705;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:24.08:0,24,315	0/0:1,0:1:0:0,0,0	0/0:15,0:13:10.30:0,10,295	0/1:14,0:13:2.89:3,0,259	0/0:4,0:4:12.04:0,12,158	0/0:7,0:7:21.07:0,21,274	0/0:6,0:6:15.05:0,15,197	1/1:2,1:3:0.94:2,1,0	0/0:8,0:8:24.06:0,24,301	1/1:0,3:3:9.02:97,9,0	1/1:2,1:3:6:56,6,0	0/0:10,0:10:27:0,27,305	0/0:5,0:5:1.25:0,1,3	0/1:1,2:3:18.53:55,0,19	1/1:3,6:9:11.99:129,12,0	1/1:1,3:4:12.02:121,12,0	0/0:5,0:5:9:0,9,99	0/0:6,0:6:18.04:0,18,220	0/0:6,0:6:9.03:0,9,118	0/0:1,0:1:3.01:0,3,39	0/0:14,0:14:33.07:0,33,400	1/1:2,5:7:9.02:97,9,0	./.	1/1:1,3:4:9.02:97,9,0	1/1:0,2:2:6.01:63,6,0	1/1:0,3:3:9.02:97,9,0	1/1:1,0:1:2.99:23,3,0	1/1:0,1:1:3.01:32,3,0
chr10	28527993	.	TCA	T	2033.40	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.704;DP=602;FS=0.574;HRun=0;HaplotypeScore=74.2177;InbreedingCoeff=0.9795;MQ=87.46;MQ0=1;MQRankSum=-1.910;QD=39.87;ReadPosRankSum=4.101;VQSLOD=5.8028;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,117,2339	0/0:6,0:6:18.06:0,18,363	0/0:19,0:19:57.14:0,57,948	0/0:23,0:23:60.09:0,60,1024	0/0:17,0:17:51.16:0,51,993	0/0:27,0:27:81.28:0,81,1645	0/0:22,0:22:66.21:0,66,1304	0/0:31,0:31:93.30:0,93,1779	0/0:21,0:21:63.22:0,63,1279	0/0:18,0:18:54.17:0,54,1062	0/0:9,0:9:27.09:0,27,545	0/0:19,0:19:57.20:0,57,1157	0/0:20,0:20:60.21:0,60,1215	0/0:16,0:16:48.14:0,48,903	0/0:38,0:38:99:0,114,2249	0/0:35,0:35:99:0,105,2133	1/1:0,27:27:72.24:1155,72,0	1/1:0,24:23:63.19:1000,63,0	0/0:25,0:25:75.26:0,75,1485	0/0:12,0:12:36.11:0,36,695	0/0:43,0:43:99:0,129,2568	0/0:16,0:16:48.16:0,48,941	0/0:12,0:12:36.12:0,36,715	0/0:19,0:19:57.16:0,57,1085	0/0:10,0:10:30.10:0,30,609	0/0:16,0:16:48.16:0,48,941	0/0:33,0:33:99:0,99,1937	0/0:4,0:4:12.04:0,12,244
chr10	28528667	.	G	GTACGTGGCTATAAACTGAGCA	7159.45	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=4.765;DP=692;FS=2.337;HRun=0;HaplotypeScore=362.6518;InbreedingCoeff=0.9997;MQ=84.49;MQ0=0;MQRankSum=-9.110;QD=166.50;ReadPosRankSum=-0.099;VQSLOD=4.0915;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,144,7744	0/0:10,0:10:30.09:0,30,1394	0/0:27,0:28:81.19:0,81,3431	0/0:19,0:19:53.77:0,54,2242	0/0:21,0:21:63.22:0,63,3178	0/0:28,0:28:84.27:0,84,4557	0/0:26,0:26:78.27:0,78,3999	0/0:39,0:39:99:0,108,5265	0/0:20,0:20:60.21:0,60,3209	0/0:21,0:21:60.17:0,60,2568	0/0:28,0:28:84.27:0,84,4309	0/0:32,0:32:96.31:0,96,5015	0/0:18,0:18:54.16:0,54,2908	0/0:21,0:21:63.19:0,63,3219	0/0:33,0:33:96.30:0,96,4889	0/0:21,0:21:60.17:0,60,3052	1/1:18,3:24:42.14:3090,42,0	1/1:15,3:19:48.16:4069,48,0	0/0:15,0:15:45.15:0,45,2307	0/0:26,0:26:75.26:0,75,3513	0/0:34,0:34:69.28:0,69,4361	0/0:28,0:28:81.28:0,81,4241	0/0:19,0:19:54.16:0,54,2318	0/0:18,0:18:51.18:0,51,2736	0/0:28,0:28:84.26:0,84,4060	0/0:29,0:29:84.28:0,84,4181	0/0:25,0:25:75.18:0,75,3757	0/0:14,0:14:42.14:0,42,2478
chr10	28529008	.	G	GT	8526.66	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-18.246;DP=668;FS=3.654;HRun=1;HaplotypeScore=86.8680;InbreedingCoeff=0.9987;MQ=95.71;MQ0=0;MQRankSum=-7.496;QD=42.42;ReadPosRankSum=1.251;VQSLOD=5.0780;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,24:25:72.24:1079,72,0	0/0:6,0:6:18.06:0,18,234	0/0:33,0:33:95.59:0,96,1176	0/0:29,0:29:81.16:0,81,953	1/1:0,20:20:57.15:829,57,0	1/1:0,21:21:63.21:944,63,0	1/1:1,26:27:61.45:982,61,0	0/0:38,0:38:99:0,111,1429	1/1:0,21:21:63.21:942,63,0	0/0:31,0:31:93.30:0,93,1198	0/0:27,0:27:81.24:0,81,1035	1/1:0,27:28:78.26:1164,78,0	0/0:24,0:24:72.23:0,72,934	0/0:18,0:18:54.16:0,54,686	0/0:24,0:24:72.22:0,72,921	0/0:27,0:27:78.25:0,78,1001	0/0:22,0:22:63.20:0,63,817	0/0:21,0:21:60.19:0,60,778	1/1:0,20:20:60.19:878,60,0	1/1:0,25:25:75.25:1124,75,0	1/1:0,14:13:39.13:584,39,0	0/0:22,0:22:66.21:0,66,856	0/0:19,0:19:54.16:0,54,687	0/0:17,0:17:45.13:0,45,560	0/0:25,0:25:75.22:0,75,946	0/0:35,0:35:99:0,99,1260	0/0:31,0:31:93.29:0,93,1194	0/0:18,0:18:54.18:0,54,701
chr10	28529051	.	A	AC	1512.10	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-1.946;DP=632;FS=0.634;HRun=0;HaplotypeScore=114.6898;InbreedingCoeff=0.9958;MQ=82.07;MQ0=0;MQRankSum=-3.606;QD=40.87;ReadPosRankSum=0.203;VQSLOD=3.1931;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:69.20:0,69,930	0/0:6,0:6:18.03:0,18,232	0/0:20,0:20:55.54:0,56,753	0/0:21,0:21:42.92:0,43,719	0/0:21,0:21:63.18:0,63,844	0/0:24,0:24:72.24:0,72,1005	0/0:20,0:20:54.16:0,54,736	0/0:43,0:43:99:0,126,1676	0/0:20,0:20:60.18:0,60,821	0/0:29,0:29:87.28:0,87,1201	0/0:29,0:29:87.28:0,87,1201	0/0:21,0:21:57:0,57,761	0/0:18,0:18:48.14:0,48,640	0/0:19,0:19:54.18:0,54,754	0/0:21,0:21:63.19:0,63,851	0/0:32,0:32:93.26:0,93,1228	1/1:1,19:20:60.16:914,60,0	1/1:2,15:17:45.62:720,46,0	0/0:25,0:25:75.24:0,75,1032	0/0:26,0:26:75.20:0,75,981	0/0:14,0:13:42.14:0,42,583	0/0:31,0:31:93.29:0,93,1269	0/0:19,0:19:57.17:0,57,779	0/0:14,0:14:39.13:0,39,545	0/0:24,0:24:72.23:0,72,993	0/0:29,0:29:84.28:0,84,1173	0/0:30,0:30:90.29:0,90,1240	0/0:15,0:15:45.15:0,45,629
chr10	28529209	.	CT	C	161.99	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.053;DP=611;FS=2.802;HRun=2;HaplotypeScore=64.7384;InbreedingCoeff=0.9517;MQ=72.45;MQ0=1;MQRankSum=-1.852;QD=12.46;ReadPosRankSum=-1.093;VQSLOD=1.9550;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:61,0:61:99:0,178,2550	0/0:11,0:11:33.11:0,33,494	0/0:21,0:17:28.18:0,28,471	0/0:26,0:25:59.44:0,59,916	0/0:22,0:22:63.15:0,63,881	0/0:27,0:27:78.25:0,78,1148	0/0:27,0:27:78.26:0,78,1160	0/0:27,0:27:78.26:0,78,1150	0/0:18,0:18:54.18:0,54,808	0/0:22,0:22:66.21:0,66,956	0/0:13,0:13:39.13:0,39,584	0/0:30,0:30:90.27:0,90,1306	0/0:23,0:23:69.21:0,69,995	0/0:23,0:23:69.21:0,69,992	0/0:17,0:17:51.17:0,51,764	0/0:21,0:21:63.21:0,63,944	1/1:0,9:9:12.04:154,12,0	1/1:0,4:4:9.03:116,9,0	0/0:17,0:17:48.09:0,48,637	0/0:23,0:23:66.22:0,66,987	0/0:24,0:24:69.23:0,69,1030	0/0:15,0:15:45.14:0,45,656	0/0:14,0:14:39.12:0,39,564	0/0:31,0:31:93.29:0,93,1352	0/0:18,0:18:54.17:0,54,791	0/0:31,0:31:90.29:0,90,1328	0/0:24,0:24:72.24:0,72,1078	0/0:12,0:12:36.08:0,36,478
chr10	28529826	.	A	ATG	3638.11	PASS	AB=0.512;AC=36;AF=0.667;AN=54;BaseQRankSum=1.959;DP=472;FS=1.501;HRun=0;HaplotypeScore=141.6097;InbreedingCoeff=0.5917;MQ=60.93;MQ0=1;MQRankSum=-5.617;QD=10.61;ReadPosRankSum=3.149;VQSLOD=3.3771;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:0,27:28:0:0,0,0	0/1:1,8:10:0:0,0,0	0/0:10,0:10:29.35:0,29,378	0/0:16,0:11:26.94:0,27,303	0/1:0,9:9:0:0,0,0	0/1:0,11:11:0:0,0,0	1/1:0,19:24:17.64:249,18,0	1/1:1,13:15:42.12:663,42,0	1/1:0,15:16:8.89:134,9,0	1/1:1,15:17:51.13:788,51,0	0/1:0,7:8:0:0,0,0	1/1:0,23:24:3.01:59,3,0	1/1:1,19:23:18.04:247,18,0	0/1:0,15:17:0:0,0,0	1/1:0,16:17:6.02:110,6,0	1/1:0,15:17:2.88:52,3,0	0/0:28,0:28:60.09:0,60,897	0/0:31,0:31:18.06:0,18,271	1/1:0,7:7:21.06:356,21,0	1/1:0,13:14:2.89:56,3,0	0/1:0,22:24:0.07:0,0,0	0/1:0,11:12:0:0,0,0	1/1:0,12:14:2.75:60,3,0	0/1:0,23:23:0.21:0,0,0	./.	1/1:0,13:15:42.08:625,42,0	1/1:0,16:19:8.80:110,9,0	1/1:1,1:7:9.01:129,9,0
chr10	28529830	.	GCA	G	1839.52	PASS	AB=1.000;AC=30;AF=0.682;AN=44;BaseQRankSum=3.796;DP=408;FS=2.705;HRun=0;HaplotypeScore=138.3784;InbreedingCoeff=0.6399;MQ=54.15;MQ0=1;MQRankSum=-5.708;QD=8.52;ReadPosRankSum=2.898;VQSLOD=3.6220;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/0:7,1:8:0:0,0,0	0/0:10,0:10:15.16:0,15,286	0/0:11,0:6:14.96:0,15,150	0/1:9,0:9:0:0,0,0	./.	1/1:23,0:23:17.95:179,18,0	1/1:12,1:13:35.31:313,35,0	1/1:15,0:15:8.86:65,9,0	1/1:13,1:14:41.79:429,42,0	./.	1/1:24,0:24:3.01:35,3,0	1/1:17,1:18:16.08:156,16,0	./.	1/1:14,0:14:6.02:65,6,0	1/1:13,0:13:3.01:36,3,0	0/0:26,0:26:53.98:0,54,779	0/0:31,0:31:17.95:0,18,208	1/1:6,0:6:17.84:184,18,0	1/1:13,0:13:2.86:17,3,0	./.	0/1:10,0:10:0.01:0,0,0	1/1:11,0:11:2.74:12,3,0	0/0:22,0:22:0:0,0,0	./.	1/1:10,0:10:30:328,30,0	1/1:17,0:17:9.02:96,9,0	1/1:6,0:6:6.01:64,6,0
chr10	28529848	.	ACACGCACGCGCACACGCACGCGCACACACACG	A	1282.29	PASS	AB=1.000;AC=18;AF=0.643;AN=28;BaseQRankSum=3.236;DP=302;FS=2.728;HRun=0;HaplotypeScore=184.7529;InbreedingCoeff=0.4608;MQ=32.10;MQ0=4;MQRankSum=-0.403;QD=9.71;ReadPosRankSum=3.751;VQSLOD=2.7020;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:14,0:7:11.35:0,11,361	0/0:16,0:6:14.48:0,14,384	./.	./.	0/1:14,0:14:0.69:1,0,3	0/1:6,0:6:0.69:12,0,1	0/0:9,0:9:0:0,0,0	1/1:11,0:11:14.93:79,15,0	./.	./.	0/1:13,0:13:3.55:4,0,11	./.	0/1:10,0:10:0:0,0,0	./.	1/1:13,0:19:33.57:886,34,0	1/1:1,28:29:3.01:255,3,0	1/1:5,0:4:11.32:56,11,0	./.	./.	./.	./.	./.	./.	1/1:8,0:8:17.16:75,17,0	1/1:11,0:11:2.54:10,3,0	1/1:6,0:6:2.50:9,2,0
chr10	28529878	.	ACG	A	145.21	PASS	AB=0.862;AC=6;AF=0.375;AN=16;BaseQRankSum=3.360;DP=128;FS=5.792;HRun=0;HaplotypeScore=36.3474;MQ=29.22;MQ0=23;MQRankSum=-2.157;QD=2.59;ReadPosRankSum=0.207;VQSLOD=0.5111;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:19,0:7:9.75:0,10,81	0/0:19,0:8:5.13:0,5,64	./.	./.	1/1:3,0:1:2.50:9,2,0	./.	./.	./.	./.	./.	0/0:1,0:1:0:0,0,0	./.	./.	./.	0/1:13,8:20:11.77:192,0,12	1/1:31,0:31:1.71:21,2,0	0/1:1,0:1:0:0,0,0	./.	./.	./.	./.	./.	0/0:4,0:2:2.68:0,3,11	./.	./.	./.
chr10	28531086	.	G	GGGC	11776.34	PASS	AB=0.532;AC=29;AF=0.518;AN=56;BaseQRankSum=10.616;DP=594;FS=5.270;HRun=0;HaplotypeScore=253.5237;InbreedingCoeff=0.9225;MQ=82.04;MQ0=0;MQRankSum=-17.980;QD=46.36;ReadPosRankSum=3.729;VQSLOD=4.8627;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,120,2149	1/1:0,7:7:21.07:375,21,0	0/0:23,0:23:61.34:0,61,941	0/0:21,0:21:54.62:0,55,936	0/0:25,0:25:66.23:0,66,1230	0/0:16,0:16:42.14:0,42,776	0/0:16,0:16:42.14:0,42,775	1/1:0,8:8:24.08:432,24,0	0/0:20,0:20:60.21:0,60,1100	1/1:1,16:17:51.17:858,51,0	1/1:2,14:19:43.43:678,43,0	0/0:27,0:27:81.26:0,81,1467	1/1:1,21:22:63.19:1103,63,0	1/1:4,21:26:78.21:1292,78,0	1/1:2,21:23:69.22:1171,69,0	1/1:0,14:14:42.14:748,42,0	0/0:35,0:35:99:0,102,1881	0/0:33,0:33:93.28:0,93,1673	0/0:22,0:22:60.64:0,61,1055	0/0:19,0:19:51.17:0,51,950	0/0:38,0:38:93.29:0,93,1689	0/1:2,22:25:25.14:771,0,25	1/1:0,13:16:40.68:626,41,0	1/1:0,11:11:17.94:315,18,0	1/1:0,20:20:60.21:1064,60,0	1/1:0,25:25:75.26:1308,75,0	1/1:1,14:17:43.02:819,43,0	1/1:0,4:4:12.04:218,12,0
chr10	28531087	.	A	AACTG	17156.53	PASS	AB=0.553;AC=29;AF=0.518;AN=56;BaseQRankSum=4.339;DP=646;FS=7.990;HRun=0;HaplotypeScore=271.4359;InbreedingCoeff=0.9457;MQ=79.16;MQ0=0;MQRankSum=-18.008;QD=56.07;ReadPosRankSum=1.857;VQSLOD=3.9731;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,120,2447	1/1:1,7:8:24.08:532,24,0	0/0:23,0:23:22.60:0,23,1012	0/0:21,0:21:54.19:0,54,1102	0/0:25,0:25:66.23:0,66,1384	0/0:16,0:16:42.14:0,42,880	0/0:17,0:17:42.14:0,42,866	1/1:6,8:14:42.14:922,42,0	0/0:20,0:20:60.21:0,60,1243	1/1:4,16:20:35.41:1162,35,0	1/1:9,15:24:34.39:1038,34,0	0/0:27,0:27:81.26:0,81,1643	1/1:6,21:27:81.20:1680,81,0	0/1:5,21:26:3.42:1368,0,3	1/1:4,21:25:54.88:1502,55,0	1/1:2,14:16:45.15:970,45,0	0/0:35,0:35:99:0,102,2122	0/0:34,0:34:93.28:0,93,1844	0/0:22,0:22:40.68:0,41,1146	0/0:18,0:18:51.18:0,51,1069	0/0:37,0:37:90.31:0,90,1880	1/1:4,21:27:78.15:1482,78,0	1/1:9,13:22:32.85:910,33,0	1/1:7,11:18:26.83:557,27,0	1/1:6,20:26:75.26:1655,75,0	1/1:3,25:28:84.29:1836,84,0	1/1:6,15:21:39.84:1274,40,0	1/1:0,4:4:12.04:270,12,0
chr10	28531178	.	CA	C	4348.27	PASS	AB=1.000;AC=50;AF=0.893;AN=56;BaseQRankSum=6.149;DP=581;FS=5.497;HRun=1;HaplotypeScore=228.0896;InbreedingCoeff=0.4958;MQ=58.00;MQ0=0;MQRankSum=-0.555;QD=7.66;ReadPosRankSum=6.162;VQSLOD=2.2400;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:32,0:32:59.13:248,59,0	1/1:6,0:6:16.17:68,16,0	0/0:5,1:6:9.02:0,9,118	0/0:6,1:7:6.81:0,7,106	1/1:22,0:22:35.20:144,35,0	1/1:26,0:26:52.58:198,53,0	1/1:18,0:18:34.91:131,35,0	1/1:19,0:19:2.01:104,2,0	1/1:14,0:14:30.91:116,31,0	0/1:21,0:21:5.64:79,0,6	1/1:18,0:18:43.83:178,44,0	1/1:28,0:28:59.70:237,60,0	1/1:26,0:26:51.14:222,51,0	1/1:19,0:19:35.32:127,35,0	1/1:33,0:33:69.44:256,69,0	1/1:25,0:25:59.32:231,59,0	1/1:36,0:36:54.29:283,54,0	1/1:28,0:28:26.71:226,27,0	0/1:14,0:14:31.83:51,0,32	1/1:20,1:21:38.59:169,39,0	1/1:27,0:27:58.37:227,58,0	1/1:19,1:20:38.40:156,38,0	1/1:19,0:19:23.97:99,24,0	1/1:31,0:31:64.99:251,65,0	1/1:20,0:20:41.82:187,42,0	1/1:22,0:22:5.38:138,5,0	1/1:19,0:19:40.13:175,40,0	1/1:4,0:4:10.82:46,11,0
chr10	28531179	.	AC	A	15249.88	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=2.722;DP=543;FS=0.000;HRun=1;HaplotypeScore=184.3845;InbreedingCoeff=0.7939;MQ=60.54;MQ0=0;MQRankSum=-2.859;QD=28.83;ReadPosRankSum=4.234;VQSLOD=4.5378;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,29:29:69.10:754,69,0	1/1:0,6:6:18.05:214,18,0	0/0:6,0:6:8.98:0,9,113	0/0:8,0:8:0.29:0,0,70	1/1:0,20:20:42.04:458,42,0	1/1:1,24:25:71.97:711,72,0	1/1:1,15:16:48:483,48,0	1/1:1,15:16:42.09:479,42,0	1/1:0,13:13:39.02:390,39,0	1/1:0,18:18:53.68:511,54,0	1/1:1,17:18:44.60:575,45,0	1/1:1,27:28:78.03:818,78,0	1/1:1,25:26:74.15:788,74,0	1/1:0,18:18:45:433,45,0	1/1:1,32:33:89.96:899,90,0	1/1:1,24:25:65.59:769,66,0	1/1:4,29:33:93.07:1002,93,0	1/1:0,26:26:75.17:868,75,0	1/1:0,10:10:27.06:300,27,0	1/1:2,20:22:45.08:500,45,0	1/1:0,26:26:69.09:735,69,0	1/1:1,17:18:48.03:512,48,0	1/1:2,14:16:32.98:345,33,0	1/1:0,30:30:78.05:831,78,0	1/1:1,16:17:51.09:583,51,0	1/1:0,19:19:56.96:629,57,0	1/1:2,15:17:45.13:523,45,0	1/1:0,4:4:12.04:140,12,0
chr10	28531346	.	CT	C	6803.71	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=3.927;DP=640;FS=1.903;HRun=2;HaplotypeScore=89.6167;InbreedingCoeff=0.9984;MQ=68.90;MQ0=0;MQRankSum=-1.018;QD=32.55;ReadPosRankSum=1.447;VQSLOD=4.7826;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,36:38:96.74:1219,97,0	0/0:11,0:11:30.10:0,30,449	0/0:21,0:21:61.44:0,61,867	0/0:13,0:13:26:0,26,435	1/1:0,20:20:51.17:662,51,0	1/1:3,25:28:78.23:985,78,0	1/1:1,22:23:51.17:662,51,0	0/0:27,0:27:81.27:0,81,1197	1/1:0,17:17:45.15:584,45,0	0/0:19,0:19:57.18:0,57,808	0/0:22,0:22:54.17:0,54,790	1/1:0,20:20:57.19:739,57,0	0/0:26,0:26:78.25:0,78,1148	0/0:18,0:18:48.14:0,48,673	0/0:28,0:28:75.25:0,75,1124	0/0:28,0:28:78.23:0,78,1145	0/0:33,0:33:99:0,99,1484	0/0:25,0:25:63.21:0,63,944	1/1:1,14:15:39.13:506,39,0	1/1:2,17:19:45.09:567,45,0	1/1:1,28:29:69.21:881,69,0	0/0:26,0:26:78.26:0,78,1160	0/0:15,0:15:38.99:0,39,565	0/0:33,0:33:93.30:0,93,1367	0/0:29,0:29:84.26:0,84,1230	0/0:26,0:26:78.26:0,78,1169	0/0:23,0:22:60.19:0,60,879	0/0:8,0:8:18.04:0,18,249
chr10	28531404	.	CT	C	9535.60	PASS	AB=0.833;AC=49;AF=0.875;AN=56;BaseQRankSum=6.038;DP=555;FS=0.496;HRun=10;HaplotypeScore=77.3267;InbreedingCoeff=0.8192;MQ=65.10;MQ0=0;MQRankSum=-1.472;QD=19.58;ReadPosRankSum=2.420;VQSLOD=5.7190;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,36:45:99:877,102,0	1/1:2,6:8:17.99:156,18,0	0/1:4,1:5:14.03:14,0,87	0/0:10,0:10:17.84:0,18,176	1/1:5,22:27:59.97:520,60,0	1/1:5,20:25:38.20:535,38,0	1/1:4,14:18:41.97:365,42,0	1/1:3,21:25:62.01:527,62,0	1/1:3,9:12:9.49:237,9,0	1/1:3,15:18:44.99:390,45,0	1/1:6,19:25:53.97:469,54,0	1/1:7,6:13:20.98:182,21,0	1/1:4,15:19:26.97:234,27,0	1/1:1,16:17:44.99:390,45,0	1/1:3,20:23:50.98:443,51,0	1/1:2,14:16:35.99:313,36,0	0/0:40,1:41:88.26:0,88,1199	0/0:17,0:17:48.13:0,48,531	1/1:8,11:19:44.98:390,45,0	1/1:3,7:11:20.02:162,20,0	1/1:5,18:23:53.99:469,54,0	1/1:3,19:22:50.98:443,51,0	1/1:1,17:18:44.98:391,45,0	1/1:4,22:26:59.98:521,60,0	1/1:4,13:17:35.99:312,36,0	1/1:3,23:26:68.98:599,69,0	1/1:3,20:23:50.98:443,51,0	1/1:0,6:6:18:156,18,0
chr10	28531643	.	G	GA	14209.16	PASS	AB=0.594;AC=51;AF=0.911;AN=56;BaseQRankSum=-6.346;DP=652;FS=2.992;HRun=9;HaplotypeScore=73.4549;InbreedingCoeff=0.7854;MQ=82.41;MQ0=0;MQRankSum=-7.269;QD=23.10;ReadPosRankSum=4.080;VQSLOD=5.7244;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,45:50:99:1460,132,0	1/1:0,8:8:18.05:199,18,0	0/0:21,0:22:51.63:0,52,413	0/0:15,0:14:31.95:0,32,248	1/1:4,21:25:60.05:624,60,0	0/1:6,13:19:6.99:385,0,7	1/1:3,29:32:49.15:769,49,0	1/1:8,25:34:54.99:808,55,0	1/1:1,16:17:45.12:498,45,0	1/1:2,17:19:48.12:520,48,0	1/1:1,17:18:25.12:502,25,0	1/1:4,27:31:59.84:663,60,0	1/1:7,14:22:32.71:346,33,0	1/1:4,18:22:48.03:494,48,0	1/1:7,23:30:46.12:727,46,0	1/1:2,16:18:25.08:505,25,0	1/1:3,2:29:68.55:378,69,0	1/1:3,1:28:59.66:298,60,0	1/1:8,17:26:54.12:581,54,0	1/1:6,21:27:31.94:560,32,0	1/1:10,21:31:54.15:598,54,0	1/1:3,14:18:41.91:432,42,0	1/1:2,13:15:33.09:365,33,0	1/1:2,19:21:54.15:597,54,0	1/1:3,16:19:25.08:505,25,0	1/1:3,20:23:57.13:619,57,0	1/1:1,24:26:63:678,63,0	1/1:0,6:6:9.02:100,9,0
chr10	28531809	.	TC	T	672.17	PASS	AB=0.918;AC=15;AF=0.268;AN=56;BaseQRankSum=1.448;DP=441;FS=21.027;HRun=11;HaplotypeScore=68.8795;InbreedingCoeff=0.2197;MQ=81.26;MQ0=0;MQRankSum=-1.530;QD=3.25;ReadPosRankSum=3.662;VQSLOD=-0.4139;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:8.42:0,8,95	1/1:5,0:5:2.98:24,3,0	0/1:35,1:32:34.91:35,0,185	0/1:22,0:20:6.10:6,0,111	0/0:17,0:17:6:0,6,57	0/0:11,0:11:3:0,3,25	0/1:22,2:24:19.67:20,0,183	0/1:13,1:15:8.44:19,0,8	0/1:14,2:16:0.61:1,0,177	0/0:14,0:14:8.79:0,9,88	0/0:14,0:14:3.48:0,3,33	0/1:14,1:15:6.11:6,0,126	0/0:15,1:16:5.32:0,5,206	0/0:12,0:12:20.98:0,21,185	0/0:14,0:14:18.49:0,18,172	0/0:13,0:13:21.03:0,21,210	1/1:11,15:26:41.89:345,42,0	1/1:3,17:22:40.03:307,40,0	0/0:21,0:21:15.04:0,15,159	0/1:8,2:10:15.15:15,0,55	0/0:22,1:23:0.47:0,0,1	0/0:9,0:9:3.01:0,3,32	0/0:9,0:9:2.74:0,3,32	0/0:23,1:24:11.40:0,11,295	0/0:13,0:13:11.66:0,12,105	1/1:11,2:13:5.93:49,6,0	0/0:6,0:6:13.26:0,13,122	0/0:3,0:3:6.02:0,6,64
chr10	28532245	.	T	TG	6617.03	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-13.221;DP=659;FS=1.869;HRun=7;HaplotypeScore=116.5679;InbreedingCoeff=0.9979;MQ=85.01;MQ0=0;MQRankSum=-4.145;QD=28.77;ReadPosRankSum=0.363;VQSLOD=3.7687;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,35:36:93.29:1123,93,0	0/0:11,0:11:21.03:0,21,202	0/0:21,0:21:26.95:0,27,368	0/0:26,0:27:28.17:0,28,368	1/1:4,12:16:27.08:325,27,0	1/1:5,24:29:40.25:757,40,0	1/1:5,28:33:78.24:942,78,0	0/0:21,0:21:51.07:0,51,492	1/1:2,20:22:57.17:688,57,0	0/0:25,0:25:60.08:0,60,575	0/0:17,0:17:33.04:0,33,317	1/1:3,21:24:60.18:723,60,0	0/0:31,0:31:81.11:0,81,777	0/0:15,0:15:42.07:0,42,406	0/0:26,0:26:72.11:0,72,695	0/0:21,0:21:57.08:0,57,545	0/0:39,0:39:99:0,102,985	0/0:24,0:24:69.11:0,69,666	1/1:1,15:17:42.13:501,42,0	1/1:3,21:24:60.18:724,60,0	1/1:4,25:29:69.21:834,69,0	0/0:25,0:25:60.08:0,60,579	0/0:18,0:18:41.79:0,42,386	0/0:29,0:29:81.13:0,81,782	0/0:27,0:27:69.10:0,69,666	0/0:12,0:12:21.02:0,21,203	0/0:28,0:27:78.13:0,78,753	0/0:12,0:12:24.03:0,24,232
chr10	28533221	.	GAA	G	3227.04	PASS	AB=0.884;AC=20;AF=0.357;AN=56;BaseQRankSum=6.161;DP=517;FS=0.000;HRun=12;HaplotypeScore=89.6943;InbreedingCoeff=0.8812;MQ=75.86;MQ0=4;MQRankSum=0.502;QD=15.98;ReadPosRankSum=3.514;VQSLOD=2.7214;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,24:26:43.32:569,43,0	0/0:11,0:11:22.88:0,23,299	0/0:24,0:13:24.02:0,24,290	0/1:30,0:21:11.28:11,0,152	1/1:2,16:18:42.05:427,42,0	1/1:3,15:19:38.81:378,39,0	1/1:3,10:13:30.06:305,30,0	0/0:23,0:25:57.15:0,57,769	1/1:4,12:16:36.03:356,36,0	0/0:17,0:17:42.13:0,42,609	0/0:12,0:12:30.07:0,30,391	1/1:6,16:22:22.12:432,22,0	0/0:15,0:15:42.11:0,42,570	0/0:17,0:18:42.06:0,42,529	0/1:9,1:12:1.03:1,0,267	0/0:15,0:17:47.56:0,48,607	0/0:26,0:33:74.69:0,75,978	0/0:17,0:17:45.05:0,45,566	1/1:2,11:13:33.01:320,33,0	1/1:3,12:16:32.72:306,33,0	1/1:1,14:15:33.07:336,33,0	0/0:16,0:16:44.92:0,45,528	0/0:17,0:20:44.19:0,44,542	0/0:17,0:19:53.12:0,53,676	0/0:19,0:20:38.58:0,39,472	0/0:20,0:22:40.92:0,41,528	0/0:14,0:16:44.61:0,45,598	0/0:9,0:12:35.51:0,36,367
chr10	28533510	.	C	CTG	11068.65	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-16.070;DP=634;FS=2.686;HRun=0;HaplotypeScore=65.1073;InbreedingCoeff=0.9997;MQ=81.28;MQ0=1;MQRankSum=-3.797;QD=47.92;ReadPosRankSum=0.756;VQSLOD=5.5130;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,39:41:99:1853,99,0	0/0:11,0:11:33.11:0,33,485	0/0:22,0:22:52.77:0,53,765	0/0:20,0:20:48.13:0,48,682	1/1:0,28:28:81.28:1516,81,0	1/1:1,17:19:45.15:842,45,0	1/1:3,26:30:75.26:1405,75,0	0/0:39,0:39:93.28:0,93,1302	1/1:2,26:28:72.25:1348,72,0	0/0:28,0:28:81.26:0,81,1176	0/0:12,0:12:36.11:0,36,512	1/1:2,24:25:66.23:1218,66,0	0/0:18,0:18:54.18:0,54,795	0/0:23,0:23:66.20:0,66,934	0/0:29,0:29:81.27:0,81,1193	0/0:21,0:21:63.20:0,63,908	0/0:35,0:35:99:0,102,1458	0/0:16,0:16:48.16:0,48,707	1/1:2,17:19:57.20:1051,57,0	1/1:2,14:17:39.13:711,39,0	1/1:0,22:23:60.21:1124,60,0	0/0:16,0:16:45.15:0,45,662	0/0:22,0:22:57.19:0,57,839	0/0:10,0:10:27.09:0,27,398	0/0:22,0:22:63.21:0,63,928	0/0:29,0:29:87.29:0,87,1281	0/0:19,0:19:57.19:0,57,839	0/0:11,0:11:33.11:0,33,486
chr10	28534280	.	ATGTG	A	651.96	PASS	AC=12;AF=0.261;AN=46;BaseQRankSum=-6.288;DP=183;FS=19.342;HRun=0;HaplotypeScore=42.9953;InbreedingCoeff=0.7080;MQ=66.92;MQ0=6;MQRankSum=1.620;QD=25.08;ReadPosRankSum=-1.475;VQSLOD=1.4058;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:9,0:9:21.05:293,21,0	0/0:3,0:3:6.02:0,6,95	./.	0/0:5,0:5:9.03:0,9,155	0/0:1,5:6:0:0,0,0	1/1:3,0:3:6.02:97,6,0	1/1:4,0:4:9.03:143,9,0	0/0:37,0:36:84.19:0,84,1201	./.	0/0:7,0:7:17.57:0,18,280	0/0:4,0:4:6.02:0,6,98	./.	0/0:4,0:4:6.02:0,6,96	0/0:4,0:4:9.03:0,9,143	0/0:3,0:3:3.01:0,3,50	0/0:3,0:3:6.01:0,6,72	0/0:24,0:18:43.12:0,43,655	0/0:12,0:12:18.01:0,18,279	1/1:4,0:4:9.02:125,9,0	1/1:4,0:4:6.02:97,6,0	1/1:2,0:2:5.99:48,6,0	0/0:3,0:3:9.03:0,9,144	./.	./.	0/0:9,0:9:21.07:0,21,353	0/0:6,0:5:9.50:0,10,141	0/0:8,0:8:18.06:0,18,308	0/0:7,0:7:14.66:0,15,249
chr10	28534325	.	TATATATAGAGAGAGAGAG	T	399.07	PASS	AB=1.000;AC=7;AF=0.318;AN=22;BaseQRankSum=0.977;DP=105;FS=5.282;HRun=0;HaplotypeScore=54.8654;InbreedingCoeff=0.1099;MQ=37.64;MQ0=10;MQRankSum=-1.183;QD=11.74;ReadPosRankSum=-0.334;VQSLOD=0.6852;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/0:1,0:1:0.89:0,1,2	./.	./.	./.	./.	0/0:1,0:1:0.47:0,0,1	0/1:14,0:14:55.35:55,0,58	./.	1/1:3,0:3:6.91:120,7,0	./.	./.	1/1:2,0:2:6.02:130,6,0	./.	./.	./.	0/0:23,0:17:10.05:0,10,1078	0/0:11,0:9:12.04:0,12,469	0/0:3,0:2:3:0,3,26	./.	./.	./.	./.	./.	./.	0/1:9,0:6:25.06:128,0,25	0/0:2,6:8:4.72:0,5,30	0/1:6,0:6:58.06:60,0,58
chr10	28534327	.	TATATAGAGAGAGAG	T	733.75	PASS	AB=1.000;AC=11;AF=0.500;AN=22;BaseQRankSum=0.132;DP=112;FS=3.093;HRun=0;HaplotypeScore=44.7679;InbreedingCoeff=0.1359;MQ=44.50;MQ0=10;MQRankSum=-0.219;QD=12.87;ReadPosRankSum=0.015;VQSLOD=1.3841;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	1/1:1,0:1:1.25:3,1,0	./.	./.	./.	./.	0/0:1,0:1:0.47:0,0,1	0/1:14,0:14:12.47:196,0,12	./.	1/1:3,0:3:9.02:158,9,0	./.	./.	1/1:2,0:2:6.02:180,6,0	./.	./.	./.	0/1:23,0:17:16.05:16,0,775	0/0:11,0:9:12.04:0,12,379	0/0:4,0:3:2.84:0,3,9	./.	./.	./.	./.	./.	./.	1/1:9,0:6:8.94:215,9,0	0/0:8,0:8:2.30:0,2,18	0/1:5,0:5:20.73:63,0,21
chr10	28534331	.	TAGAGAGAGAG	T	770.15	PASS	AB=1.000;AC=11;AF=0.500;AN=22;BaseQRankSum=-0.775;DP=122;FS=0.000;HRun=0;HaplotypeScore=40.9246;InbreedingCoeff=0.4925;MQ=44.85;MQ0=11;MQRankSum=2.484;QD=17.11;ReadPosRankSum=-0.047;VQSLOD=1.2702;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:10,0:2:3.01:0,3,34	0/0:10,0:1:0:0,0,0	./.	./.	./.	1/1:9,10:19:2.87:310,3,0	./.	1/1:1,3:4:9.02:168,9,0	./.	./.	1/1:2,0:2:6.02:180,6,0	./.	./.	./.	0/0:23,0:17:20.66:0,21,673	0/0:9,0:7:9.03:0,9,322	0/0:4,0:3:2.84:0,3,9	./.	./.	./.	./.	./.	./.	1/1:6,2:5:5.93:176,6,0	0/1:7,0:7:0:0,0,0	1/1:4,0:5:0.32:33,0,0
chr10	28535174	.	GACAC	G	21025.81	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-1.480;DP=780;FS=2.107;HRun=0;HaplotypeScore=159.0257;InbreedingCoeff=0.9728;MQ=69.95;MQ0=4;MQRankSum=2.460;QD=31.76;ReadPosRankSum=2.401;VQSLOD=4.8178;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,19:27:45.12:741,45,0	1/1:1,5:6:8.92:151,9,0	0/0:37,0:19:13.89:0,14,304	0/0:42,0:32:29.44:0,29,529	1/1:6,24:30:51.17:856,51,0	1/1:2,15:17:27.09:453,27,0	1/1:6,6:13:15.04:229,15,0	1/1:10,24:35:75.18:1092,75,0	1/1:6,18:25:51.17:834,51,0	1/1:7,21:29:66.17:1023,66,0	1/1:4,24:29:44.67:733,45,0	1/1:8,36:45:84.71:1354,85,0	1/1:5,21:27:57.08:935,57,0	1/1:7,18:25:45.15:730,45,0	1/1:3,36:41:87.28:1398,87,0	1/1:6,28:34:66.22:1108,66,0	0/0:10,0:20:33.11:0,33,689	0/0:8,0:19:30.10:0,30,530	1/1:5,14:19:39.13:608,39,0	1/1:6,26:35:69.22:1097,69,0	1/1:10,32:41:81.28:1360,81,0	1/1:5,29:34:59.87:1008,60,0	1/1:2,20:22:50.91:840,51,0	1/1:0,32:32:69.24:1159,69,0	1/1:4,17:21:45.15:756,45,0	1/1:4,27:32:84.20:1244,84,0	1/1:5,18:22:42.14:705,42,0	1/1:6,11:19:39.12:610,39,0
chr10	28535792	.	T	TAAAAAAAACAAAAAAAAACA	22070.71	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=2.452;DP=652;FS=3.694;HRun=0;HaplotypeScore=292.6143;InbreedingCoeff=0.9955;MQ=71.85;MQ0=0;MQRankSum=-14.026;QD=102.18;ReadPosRankSum=-2.510;VQSLOD=3.7575;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:26:48.12:3299,48,0	0/0:9,0:9:24.08:0,24,1266	0/0:22,0:20:36.12:0,36,952	0/0:17,0:17:23.42:0,23,833	1/1:14,5:34:33.11:2135,33,0	1/1:7,10:28:39.13:3576,39,0	1/1:14,2:19:27.09:2258,27,0	0/0:43,0:43:96.28:0,96,3570	1/1:12,2:23:24.08:1983,24,0	0/0:30,0:30:63.17:0,63,2640	0/0:23,0:23:60.14:0,60,2356	1/1:10,3:20:33.58:2638,34,0	0/0:20,0:20:51.09:0,51,2007	0/0:27,0:27:75.21:0,75,3405	0/0:24,0:24:60.17:0,60,2619	0/0:25,0:24:57.19:0,57,2895	0/0:35,0:35:87.27:0,87,3954	0/0:17,0:17:36.12:0,36,1495	1/1:20,0:19:39.12:2449,39,0	1/1:17,6:39:42.14:3056,42,0	1/1:7,0:7:15.02:676,15,0	0/0:17,0:17:42.11:0,42,1739	0/0:18,0:18:42.12:0,42,2010	0/0:19,0:19:45.15:0,45,2322	0/0:24,0:24:57.19:0,57,2774	0/0:29,0:29:78.26:0,78,3829	0/0:30,0:30:81.26:0,81,3664	0/0:7,0:7:21.05:0,21,835
chr10	28536117	.	AGTTT	A	9422.22	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=15.063;DP=539;FS=3.675;HRun=0;HaplotypeScore=89.4468;InbreedingCoeff=0.9944;MQ=70.81;MQ0=1;MQRankSum=-5.055;QD=39.42;ReadPosRankSum=4.430;VQSLOD=4.6520;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,32:32:75.26:1335,75,0	0/0:5,0:5:15.05:0,15,387	0/0:14,0:14:15.05:0,15,317	0/0:10,0:10:27.06:0,27,607	1/1:3,19:22:51.14:860,51,0	1/1:1,23:24:48.16:855,48,0	1/1:2,21:23:51.17:908,51,0	0/0:38,0:38:96.33:0,96,2345	1/1:2,10:12:24.08:427,24,0	0/0:21,0:21:54.19:0,54,1374	0/0:25,0:25:75.26:0,75,1926	1/1:2,17:19:45.15:801,45,0	0/0:17,0:17:39.13:0,39,998	0/0:15,0:15:39.13:0,39,963	0/0:19,0:18:45.14:0,45,1099	0/0:9,0:9:24.08:0,24,619	1/1:2,30:32:57.20:1015,57,0	1/1:1,17:18:48.16:854,48,0	1/1:2,19:22:57.20:1014,57,0	1/1:3,19:22:54.18:961,54,0	1/1:3,9:12:24.04:392,24,0	0/0:17,0:17:48.16:0,48,1236	0/0:14,0:14:36.12:0,36,899	0/0:14,0:14:39.13:0,39,1007	0/0:17,0:17:45.15:0,45,1152	0/0:26,0:26:63.21:0,63,1564	0/0:26,0:26:57.18:0,57,1405	0/0:13,0:13:39.13:0,39,963
chr10	28536302	.	G	GA	204.84	PASS	AC=4;AF=0.077;AN=52;BaseQRankSum=1.175;DP=326;FS=5.441;HRun=7;HaplotypeScore=76.9862;InbreedingCoeff=0.7545;MQ=35.07;MQ0=22;MQRankSum=-1.134;QD=7.32;ReadPosRankSum=0.508;VQSLOD=0.4860;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:17:36.05:0,36,346	0/0:6,0:5:9.01:0,9,87	./.	./.	0/0:20,0:17:29.95:0,30,284	0/0:16,0:15:30.04:0,30,289	0/0:12,0:12:17.97:0,18,173	0/0:16,0:15:39.06:0,39,375	0/0:10,0:10:24.04:0,24,231	0/0:20,0:14:30.05:0,30,288	0/0:13,0:10:15.02:0,15,145	0/0:17,0:17:39.06:0,39,375	0/0:9,0:8:21.03:0,21,201	0/0:5,0:5:12:0,12,110	0/0:13,0:12:23.93:0,24,231	0/0:8,0:8:12.01:0,12,116	1/1:11,9:18:21.06:253,21,0	1/1:5,1:6:8.63:62,9,0	0/0:10,0:9:20.95:0,21,185	0/0:7,0:6:18.03:0,18,172	0/0:9,0:8:2.99:0,3,23	0/0:11,0:9:15.02:0,15,145	0/0:13,0:10:21.03:0,21,202	0/0:11,0:11:11.95:0,12,106	0/0:10,0:9:20.85:0,21,179	0/0:15,0:8:15.02:0,15,144	0/0:19,0:14:37.30:0,37,347	0/0:8,0:5:7.31:0,7,74
chr10	28536861	.	G	GGAAA	19953.83	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-11.982;DP=519;FS=0.333;HRun=0;HaplotypeScore=78.0569;InbreedingCoeff=0.9937;MQ=70.52;MQ0=0;MQRankSum=-4.083;QD=65.42;ReadPosRankSum=0.768;VQSLOD=6.3039;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,34:36:99:2545,100,0	0/0:7,0:7:18.06:0,18,348	0/0:6,0:6:18.04:0,18,299	0/0:11,0:11:33.07:0,33,585	1/1:0,15:17:39.25:796,39,0	1/1:0,14:15:39.13:1056,39,0	1/1:4,36:44:99:2887,108,0	0/0:14,0:14:42.09:0,42,708	1/1:1,18:20:57.20:1559,57,0	0/0:11,0:11:33.11:0,33,609	0/0:11,0:11:30.09:0,30,538	1/1:2,19:21:57.20:1559,57,0	0/0:19,0:19:51.17:0,51,988	0/0:18,0:18:54.17:0,54,1012	0/0:13,0:13:39.13:0,39,754	0/0:10,0:10:30.10:0,30,572	1/1:3,30:36:81.23:2156,81,0	1/1:2,21:23:69.19:1783,69,0	1/1:4,21:30:81.23:1964,81,0	1/1:1,8:10:27.05:657,27,0	1/1:5,45:53:99:2992,127,0	0/0:5,0:5:15.05:0,15,291	0/0:7,0:7:21.07:0,21,407	0/0:30,0:30:90.31:0,90,1744	0/0:18,0:18:54.13:0,54,1007	0/0:17,0:17:51.15:0,51,922	0/0:10,0:10:27.09:0,27,523	0/0:7,0:7:21.07:0,21,407
chr10	28537338	.	G	GC	8040.20	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=21.046;DP=656;FS=2.049;HRun=2;HaplotypeScore=128.2102;InbreedingCoeff=0.9999;MQ=81.81;MQ0=0;MQRankSum=-9.923;QD=31.41;ReadPosRankSum=5.669;VQSLOD=4.3077;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,33:37:99:1065,101,0	0/0:14,0:14:42.14:0,42,586	0/0:26,0:26:60.33:0,60,909	0/0:11,0:11:29.96:0,30,380	1/1:1,20:21:60.08:668,60,0	1/1:2,23:25:75.16:885,75,0	1/1:1,14:15:42.06:481,42,0	0/0:32,0:32:93.31:0,93,1298	1/1:0,22:22:65.90:698,66,0	0/0:25,0:25:75.25:0,75,1033	0/0:33,0:33:99:0,99,1338	1/1:2,22:24:72.06:767,72,0	0/0:21,0:21:63.21:0,63,878	0/0:11,0:11:33.11:0,33,461	0/0:29,0:29:87.28:0,87,1198	0/0:23,0:23:69.19:0,69,914	1/1:1,23:24:66.12:772,66,0	1/1:3,24:27:79.74:929,80,0	1/1:0,14:14:42.09:484,42,0	1/1:0,25:25:71.98:757,72,0	1/1:4,18:22:45.58:534,46,0	0/0:28,0:28:78.26:0,78,1091	0/0:24,0:24:72.24:0,72,1006	0/0:22,0:22:63.21:0,63,880	0/0:31,0:31:90.26:0,90,1195	0/0:24,0:24:72.22:0,72,989	0/0:28,0:28:84.23:0,84,1119	0/0:18,0:18:54.18:0,54,754
chr10	28537340	.	TTA	T	8180.44	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=21.111;DP=662;FS=1.294;HRun=0;HaplotypeScore=142.5999;InbreedingCoeff=0.9999;MQ=82.78;MQ0=0;MQRankSum=-7.133;QD=31.71;ReadPosRankSum=6.697;VQSLOD=6.2349;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,33:37:90.87:1034,91,0	0/0:14,0:14:42.14:0,42,835	0/0:26,0:26:78.10:0,78,1499	0/0:13,0:13:33.11:0,33,659	1/1:1,20:21:57.59:664,58,0	1/1:2,23:25:70.89:861,71,0	1/1:3,14:17:48.10:582,48,0	0/0:32,0:32:96.32:0,96,1885	1/1:0,22:22:66:721,66,0	0/0:25,0:25:75.24:0,75,1441	0/0:33,0:33:99:0,99,1943	1/1:2,22:24:69.98:765,70,0	0/0:22,0:22:66.23:0,66,1324	0/0:11,0:11:33.11:0,33,654	0/0:31,0:31:93.32:0,93,1872	0/0:23,0:23:69.24:0,69,1402	1/1:1,23:24:63.29:767,63,0	1/1:4,24:28:78.07:988,78,0	1/1:0,14:14:42.10:497,42,0	1/1:0,25:25:72.09:794,72,0	1/1:3,18:21:31.49:508,31,0	0/0:30,0:30:90.31:0,90,1793	0/0:24,0:24:72.25:0,72,1461	0/0:22,0:22:63.20:0,63,1242	0/0:30,0:30:86.93:0,87,1695	0/0:24,0:24:72.25:0,72,1464	0/0:27,0:27:81.28:0,81,1645	0/0:17,0:17:51.18:0,51,1036
chr10	28538007	.	AGCCCTG	A	14533.96	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=15.282;DP=572;FS=2.303;HRun=0;HaplotypeScore=130.8979;InbreedingCoeff=0.9847;MQ=54.11;MQ0=1;MQRankSum=-17.805;QD=58.60;ReadPosRankSum=1.187;VQSLOD=5.3720;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,114,3972	1/1:0,2:2:6.02:144,6,0	0/0:25,0:21:57.18:0,57,1892	0/0:25,0:23:69.23:0,69,2169	0/0:13,0:13:39.13:0,39,1356	0/0:20,0:20:60.21:0,60,2092	0/0:27,0:27:78.27:0,78,2754	1/1:4,23:27:66.22:1517,66,0	0/0:24,0:24:66.23:0,66,2351	1/1:1,17:18:45.13:1003,45,0	1/1:1,15:16:39.13:936,39,0	0/0:23,0:23:66.23:0,66,2306	1/1:2,19:21:42.14:1008,42,0	1/1:3,16:19:42.14:978,42,0	1/1:1,19:20:51.18:1224,51,0	1/1:4,22:26:63.22:1484,63,0	0/0:34,0:34:99:0,102,3675	0/0:25,0:25:75.24:0,75,2621	0/0:27,0:27:72.25:0,72,2430	0/0:16,0:16:45.14:0,45,1539	0/0:26,0:26:75.26:0,75,2703	1/1:0,10:10:30.10:700,30,0	1/1:0,9:9:24.08:542,24,0	1/1:1,20:21:39.60:884,40,0	1/1:0,16:16:48.16:1100,48,0	1/1:0,14:14:42.14:1009,42,0	1/1:0,22:22:63.22:1512,63,0	1/1:0,7:7:21.07:494,21,0
chr10	28538233	.	TA	T	1636.59	PASS	AB=0.971;AC=29;AF=0.518;AN=56;BaseQRankSum=6.739;DP=387;FS=129.574;HRun=1;HaplotypeScore=61.7265;InbreedingCoeff=0.4928;MQ=66.83;MQ0=1;MQRankSum=-0.185;QD=7.12;ReadPosRankSum=-3.135;VQSLOD=0.3829;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:12,0:12:17.20:120,17,0	0/0:6,0:6:17.94:0,18,164	0/0:16,0:14:28.47:0,28,292	0/0:19,0:14:29.55:0,30,307	1/1:20,0:20:42.65:310,43,0	1/1:17,0:17:12.28:50,12,0	1/1:12,0:12:29.80:184,30,0	0/0:32,0:31:72.25:0,72,821	1/1:13,0:13:33.66:255,34,0	0/1:18,6:24:16.77:17,0,469	0/0:16,0:16:22.04:0,22,294	1/1:9,0:9:14.69:100,15,0	0/1:16,0:15:4.25:4,0,287	0/1:5,0:5:9.85:10,0,101	0/1:13,0:13:15.82:16,0,221	0/1:11,0:11:41.09:41,0,147	1/1:7,0:7:9.43:71,9,0	1/1:6,0:6:13.30:98,13,0	1/1:11,0:9:23.73:201,24,0	1/1:21,0:20:30.25:205,30,0	1/1:3,0:3:7.21:50,7,0	0/0:8,0:8:18.01:0,18,172	0/0:11,0:11:20.42:0,20,195	0/0:6,0:5:11.93:0,12,105	0/1:23,0:23:40.60:41,0,414	0/0:20,0:20:32.59:0,33,506	0/0:23,0:23:27.80:0,28,438	0/1:7,0:7:17.10:70,0,17
chr10	28539151	.	TGGG	T	5494.60	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=1.661;DP=545;FS=26.811;HRun=12;HaplotypeScore=86.5767;InbreedingCoeff=0.9105;MQ=71.23;MQ0=0;MQRankSum=-2.315;QD=24.98;ReadPosRankSum=10.310;VQSLOD=0.5796;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:12,19:31:66.02:829,66,0	0/0:11,0:11:18.53:0,19,314	0/0:12,0:11:24.05:0,24,339	0/0:19,0:19:35.04:0,35,420	1/1:4,15:19:26.98:320,27,0	1/1:9,16:24:48.11:604,48,0	1/1:4,26:30:66.19:831,66,0	0/0:21,0:21:14.99:0,15,184	1/1:4,19:23:51.14:644,51,0	0/0:10,0:11:5.98:0,6,65	0/0:4,0:6:0.89:0,1,2	1/1:6,19:25:60.16:756,60,0	0/0:12,0:17:17.78:0,18,277	0/0:11,0:17:16.13:0,16,223	0/0:17,0:25:9.03:0,9,143	0/0:14,0:20:18:0,18,300	0/0:12,0:18:29.92:0,30,238	0/0:10,0:17:29.44:0,29,259	1/1:6,15:21:45.06:539,45,0	1/1:4,10:14:19.15:329,19,0	1/1:11,21:32:49.39:641,49,0	0/0:15,0:16:6:0,6,82	0/0:7,0:9:12.50:0,12,190	0/0:17,0:17:15.99:0,16,283	0/0:26,0:27:36.01:0,36,532	0/0:17,0:21:11.93:0,12,192	0/0:21,0:27:18.10:0,18,286	0/0:8,0:12:15.05:0,15,217
chr10	28539161	.	GGGT	G	2195.37	PASS	AB=0.918;AC=12;AF=0.214;AN=56;BaseQRankSum=9.153;DP=481;FS=59.110;HRun=0;HaplotypeScore=88.5076;InbreedingCoeff=0.3302;MQ=70.12;MQ0=0;MQRankSum=-2.587;QD=10.36;ReadPosRankSum=12.612;VQSLOD=-0.0796;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:27,6:33:96.04:396,0,96	0/0:12,0:12:27.46:0,27,410	0/0:10,0:9:26.78:0,27,355	0/0:21,0:19:39.27:0,39,631	0/1:18,1:19:15.10:123,0,15	1/1:17,5:22:24.37:301,24,0	1/1:28,1:29:26.45:358,26,0	0/0:20,0:20:38.85:0,39,395	0/1:23,1:24:30.88:283,0,31	0/0:7,0:7:12.89:0,13,140	0/0:4,0:4:2.99:0,3,23	0/1:22,4:26:7.36:349,0,7	0/0:14,0:14:20.79:0,21,342	0/0:17,0:17:25.11:0,25,321	0/0:15,0:15:15.01:0,15,189	0/0:14,0:14:21.05:0,21,354	0/0:17,0:17:40.78:0,41,351	0/0:16,0:16:42.92:0,43,374	0/1:18,1:19:33.27:197,0,33	0/1:14,1:15:36.93:149,0,37	1/1:23,2:25:6.02:203,6,0	0/0:12,0:12:24.47:0,24,278	0/0:10,0:10:26.97:0,27,379	0/0:11,0:11:18.46:0,18,323	0/0:16,0:16:36.05:0,36,589	0/0:15,0:15:27.02:0,27,363	0/0:25,0:25:21.41:0,21,337	0/0:13,0:13:26.96:0,27,298
chr10	28539478	.	T	TG	19742.21	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-6.259;DP=612;FS=6.766;HRun=0;HaplotypeScore=88.8306;InbreedingCoeff=0.9842;MQ=60.60;MQ0=0;MQRankSum=-2.428;QD=34.45;ReadPosRankSum=4.050;VQSLOD=4.3005;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,22:35:93.10:1177,93,0	1/1:0,5:5:15.05:208,15,0	0/0:16,0:9:16.99:0,17,235	0/0:23,0:15:22.62:0,23,400	1/1:2,25:27:71.40:765,71,0	1/1:1,17:18:45.15:633,45,0	1/1:6,23:29:75.02:943,75,0	1/1:1,27:28:81.22:1094,81,0	1/1:2,17:19:48.14:657,48,0	1/1:1,26:27:77.25:1040,77,0	1/1:1,12:13:35.95:445,36,0	1/1:0,15:15:39.13:551,39,0	1/1:1,17:18:44.17:585,44,0	1/1:1,30:31:75.24:1036,75,0	1/1:3,19:22:43.33:711,43,0	1/1:3,20:22:47.76:768,48,0	1/1:2,32:33:75.25:1064,75,0	1/1:5,16:20:35.15:681,35,0	1/1:4,28:32:88.39:1152,88,0	1/1:4,18:22:63.14:837,63,0	1/1:0,10:10:27.09:384,27,0	1/1:1,21:22:42.02:727,42,0	1/1:1,17:18:47.69:557,48,0	1/1:1,11:12:33.11:464,33,0	1/1:8,16:23:55.58:743,56,0	1/1:0,26:26:75.22:1032,75,0	1/1:3,20:23:56.46:775,56,0	1/1:1,17:18:51.17:712,51,0
chr10	28539523	.	G	GTTT	8743.46	PASS	AB=0.958;AC=51;AF=0.944;AN=54;BaseQRankSum=-2.338;DP=538;FS=9.231;HRun=12;HaplotypeScore=126.9721;InbreedingCoeff=0.1336;MQ=39.89;MQ0=20;MQRankSum=-0.958;QD=16.65;ReadPosRankSum=1.861;VQSLOD=2.6598;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:29:51.03:217,51,0	1/1:3,6:10:18.06:316,18,0	0/1:22,0:2:0:0,0,0	./.	1/1:20,0:19:45.51:235,46,0	0/1:18,0:17:4.87:78,0,5	1/1:30,0:28:4.56:100,5,0	1/1:16,4:21:32.94:432,33,0	1/1:13,0:13:21.60:98,22,0	1/1:17,7:23:44.98:651,45,0	1/1:9,6:20:38.99:558,39,0	1/1:11,0:12:25.74:136,26,0	1/1:7,4:10:21.03:321,21,0	1/1:14,1:17:42.03:578,42,0	1/1:17,2:20:27.89:359,28,0	1/1:12,6:17:36.06:550,36,0	1/1:24,1:25:8.87:264,9,0	0/1:18,1:17:49.08:92,0,49	1/1:25,0:23:14.26:125,14,0	1/1:21,0:23:37.06:158,37,0	1/1:4,0:2:2.88:15,3,0	1/1:11,3:15:27.03:415,27,0	1/1:14,4:20:36.43:423,36,0	1/1:3,6:7:12.51:221,13,0	1/1:14,5:20:47.76:663,48,0	1/1:19,13:31:60.53:870,61,0	1/1:14,6:20:42.08:619,42,0	1/1:7,2:9:18.01:251,18,0
chr10	28539526	.	T	TTG	5810.27	PASS	AB=0.959;AC=27;AF=0.500;AN=54;BaseQRankSum=-1.376;DP=522;FS=9.105;HRun=0;HaplotypeScore=122.2713;InbreedingCoeff=0.0943;MQ=38.65;MQ0=22;MQRankSum=-1.686;QD=15.96;ReadPosRankSum=7.469;VQSLOD=3.9788;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,25:29:66.20:1030,66,0	0/1:10,0:10:8.53:9,0,37	0/0:21,0:2:2.91:0,3,21	./.	1/1:4,16:19:56.99:819,57,0	0/1:3,13:16:9.13:478,0,9	1/1:7,22:27:15.48:766,15,0	0/0:22,0:20:11.26:0,11,135	1/1:5,8:13:30.05:433,30,0	0/1:23,0:21:13.96:14,0,146	0/1:20,0:20:42.40:42,0,86	1/1:7,4:11:28.32:371,28,0	0/0:11,0:10:1.17:0,1,72	0/1:17,0:17:58.24:58,0,77	0/0:19,0:19:3.15:0,3,132	0/0:17,0:16:0.33:0,0,61	0/0:26,0:24:9.45:0,9,206	0/0:21,0:17:32.80:0,33,325	1/1:17,10:21:38.05:730,38,0	1/1:4,17:20:51.17:818,51,0	1/1:5,0:3:5.63:62,6,0	0/1:15,0:14:11.49:11,0,72	0/1:20,0:19:3.20:3,0,144	0/0:9,0:7:9.17:0,9,35	0/1:22,0:20:30.80:70,0,31	0/1:34,0:31:22.20:22,0,168	0/1:21,0:19:51:67,0,51	0/1:9,0:9:5.43:5,0,74
chr10	28539646	.	G	GT	2274.45	PASS	AB=0.909;AC=31;AF=0.554;AN=56;BaseQRankSum=-2.970;DP=478;FS=9.819;HRun=10;HaplotypeScore=130.2723;InbreedingCoeff=0.7218;MQ=58.77;MQ0=13;MQRankSum=-0.657;QD=8.62;ReadPosRankSum=-1.164;VQSLOD=0.9757;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:18:36.07:0,36,239	1/1:7,1:8:14.93:57,15,0	0/0:35,0:14:10.39:0,10,83	0/0:25,0:12:8.09:0,8,57	0/0:35,0:35:79.54:0,80,593	0/0:23,0:23:4.22:0,4,174	0/0:13,0:13:15.39:0,15,151	1/1:11,2:12:25.15:224,25,0	0/0:9,0:9:23.91:0,24,187	1/1:11,6:17:22.60:172,23,0	1/1:9,1:9:17.39:122,17,0	0/0:7,0:7:17.95:0,18,145	1/1:9,3:11:16.23:77,16,0	1/1:12,3:15:22.74:149,23,0	1/1:11,3:14:6.91:176,7,0	1/1:15,5:20:30.09:211,30,0	0/1:21,0:21:4.16:4,0,7	0/1:17,0:17:7.24:7,0,31	0/0:19,1:17:27.07:0,27,271	0/0:16,0:15:41.19:0,41,301	0/0:9,0:9:5.95:0,6,43	1/1:12,1:13:32.77:178,33,0	1/1:18,0:18:9.32:163,9,0	1/1:10,5:14:23.89:216,24,0	1/1:16,8:24:53.04:299,53,0	1/1:21,3:23:48.40:252,48,0	1/1:15,0:15:1.32:67,1,0	0/1:5,3:8:7.57:108,0,8
chr10	28539655	.	TTG	T	6020.15	PASS	AB=0.979;AC=41;AF=0.732;AN=56;BaseQRankSum=-6.516;DP=462;FS=10.040;HRun=0;HaplotypeScore=126.4836;InbreedingCoeff=0.2504;MQ=56.45;MQ0=10;MQRankSum=-1.152;QD=15.36;ReadPosRankSum=-1.280;VQSLOD=3.7822;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:17,0:16:8.22:8,0,66	1/1:3,6:9:25.54:233,26,0	0/0:31,0:13:12.04:0,12,135	0/0:22,0:9:10.10:0,10,70	0/1:34,0:34:6.48:6,0,130	0/1:21,2:23:7.17:54,0,7	0/1:12,0:12:11.95:12,0,27	1/1:11,1:12:34.22:312,34,0	1/1:10,0:9:3.10:12,3,0	1/1:14,3:18:43.65:466,44,0	1/1:6,4:11:32.85:317,33,0	0/1:7,0:7:4.35:4,0,34	1/1:7,3:10:24.06:227,24,0	1/1:10,1:11:29.97:286,30,0	1/1:8,3:13:28.69:303,29,0	1/1:10,8:20:57.97:570,58,0	1/1:21,0:21:25.79:148,26,0	0/1:17,0:17:13.04:80,0,13	0/1:17,0:14:35.25:35,0,81	0/0:17,0:16:5.77:0,6,42	0/1:11,0:11:6.39:6,0,16	1/1:6,6:16:45.09:479,45,0	1/1:5,3:15:14.42:364,14,0	1/1:10,3:12:32.95:318,33,0	1/1:14,10:24:71.96:745,72,0	1/1:13,10:23:63.05:648,63,0	1/1:11,5:16:25.98:258,26,0	0/1:7,1:8:3.58:127,0,4
chr10	28539656	.	TG	T	3857.03	PASS	AB=0.984;AC=39;AF=0.696;AN=56;BaseQRankSum=-4.415;DP=455;FS=10.642;HRun=1;HaplotypeScore=125.8589;InbreedingCoeff=0.4538;MQ=56.80;MQ0=8;MQRankSum=-2.275;QD=10.51;ReadPosRankSum=-2.567;VQSLOD=0.1010;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:17,0:16:10.67:11,0,73	1/1:9,0:9:26.14:161,26,0	0/1:28,1:11:19.84:20,0,70	0/0:21,0:9:12.33:0,12,78	0/0:34,0:34:24.42:0,24,272	0/1:23,0:23:7.54:8,0,48	0/1:11,1:12:16.17:16,0,60	1/1:13,0:12:30.98:177,31,0	0/0:10,0:9:15.52:0,16,45	1/1:17,1:18:38.62:215,39,0	1/1:12,2:13:31.81:217,32,0	0/0:6,0:6:12.49:0,12,76	1/1:11,0:10:25.89:154,26,0	1/1:10,0:10:28.28:182,28,0	1/1:13,0:13:21.89:140,22,0	1/1:19,1:20:50.97:298,51,0	1/1:9,13:22:40.79:421,41,0	1/1:12,4:16:2.62:280,3,0	0/1:16,0:14:1.71:2,0,133	0/0:17,0:16:26.86:0,27,116	0/1:11,0:11:5.13:5,0,22	1/1:15,1:16:42.80:240,43,0	1/1:13,1:14:7.69:178,8,0	1/1:12,0:11:29.26:146,29,0	1/1:23,1:24:68.35:397,68,0	1/1:20,3:23:60.22:347,60,0	1/1:12,2:15:25.18:199,25,0	0/1:8,0:8:13.81:44,0,14
chr10	28539659	.	TG	T	2160.55	PASS	AB=0.989;AC=30;AF=0.536;AN=56;BaseQRankSum=-0.310;DP=444;FS=10.968;HRun=1;HaplotypeScore=130.7509;InbreedingCoeff=0.2208;MQ=55.65;MQ0=7;MQRankSum=-4.430;QD=6.88;ReadPosRankSum=1.708;VQSLOD=-0.1678;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:17,0:16:3.32:3,0,108	1/1:9,0:9:23.82:134,24,0	0/1:25,1:10:45.94:46,0,118	0/0:20,1:8:11.88:0,12,109	0/0:33,0:33:29.12:0,29,420	0/0:22,0:22:3.83:0,4,97	0/1:12,0:12:6.66:7,0,63	0/1:9,0:8:49.42:49,0,55	0/0:9,0:8:22.67:0,23,110	0/1:18,0:18:18.41:110,0,18	1/1:15,0:14:7.18:119,7,0	0/0:7,0:7:17.80:0,18,137	1/1:12,0:11:20.82:94,21,0	1/1:7,0:7:2.28:56,2,0	0/1:12,1:13:42.88:43,0,56	0/1:20,0:20:14.85:107,0,15	1/1:20,3:23:42.91:456,43,0	0/1:16,0:16:11.64:276,0,12	0/0:14,0:13:19.14:0,19,141	0/0:17,0:16:30.41:0,30,160	0/1:10,0:10:8.87:19,0,9	1/1:17,0:17:19.21:171,19,0	1/1:14,1:15:1.26:152,1,0	0/1:13,0:12:43.32:43,0,52	1/1:22,0:22:18.42:161,18,0	1/1:25,0:24:46.96:219,47,0	1/1:14,0:15:13.94:81,14,0	0/0:7,0:7:6.30:0,6,120
chr10	28539664	.	TTGTTGTTG	T	8611.37	PASS	AB=0.994;AC=40;AF=0.714;AN=56;BaseQRankSum=-1.751;DP=438;FS=3.625;HRun=0;HaplotypeScore=158.3415;InbreedingCoeff=0.1843;MQ=56.27;MQ0=7;MQRankSum=-5.321;QD=22.43;ReadPosRankSum=4.889;VQSLOD=3.9070;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,8:17:36.59:833,37,0	1/1:9,0:9:23.51:111,24,0	0/0:24,0:11:26.49:0,26,415	0/0:14,0:6:9.41:0,9,86	1/1:3,30:33:90.23:1892,90,0	1/1:2,20:22:33.11:847,33,0	1/1:2,11:13:20.96:486,21,0	0/1:10,0:9:42.40:42,0,45	1/1:8,2:9:27.01:628,27,0	1/1:16,0:16:21.54:155,22,0	1/1:14,0:13:14.75:114,15,0	1/1:6,0:6:18.06:363,18,0	0/1:13,0:12:4.60:53,0,5	0/1:7,0:7:26.67:39,0,27	0/1:15,0:15:47.45:57,0,47	0/1:19,0:19:14.21:138,0,14	0/1:21,0:21:79.03:79,0,185	0/0:15,0:15:19.43:0,19,232	1/1:15,1:15:45.13:825,45,0	1/1:2,15:16:42.14:956,42,0	1/1:1,9:10:7.27:141,7,0	1/1:17,0:17:29.99:204,30,0	0/1:16,0:17:3.36:89,0,3	0/1:12,0:11:0.13:51,0,0	0/1:21,0:21:26.91:136,0,27	1/1:26,0:25:38.69:282,39,0	1/1:15,0:15:2.19:90,2,0	0/1:7,0:7:2.17:2,0,59
chr10	28539665	.	TGTTGTTG	T	10380.90	PASS	AB=1.000;AC=47;AF=0.839;AN=56;BaseQRankSum=-1.473;DP=439;FS=7.299;HRun=0;HaplotypeScore=146.2839;InbreedingCoeff=0.2568;MQ=56.32;MQ0=7;MQRankSum=-4.058;QD=25.82;ReadPosRankSum=5.141;VQSLOD=4.0088;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:17,1:17:37:680,37,0	1/1:9,0:9:26.09:276,26,0	0/0:23,0:11:24.29:0,24,389	0/0:13,0:6:9.21:0,9,70	1/1:32,1:33:90.22:1650,90,0	1/1:22,0:22:33.11:672,33,0	1/1:13,0:13:21.07:413,21,0	0/1:10,0:9:17.45:107,0,17	1/1:9,1:9:27.01:584,27,0	1/1:16,0:16:33.10:347,33,0	1/1:14,0:13:26.62:270,27,0	1/1:7,0:7:20.56:425,21,0	1/1:13,0:12:12.76:175,13,0	1/1:8,0:8:6.14:122,6,0	0/1:14,0:14:10.08:181,0,10	1/1:19,0:19:43.68:456,44,0	0/1:21,0:21:99:212,0,109	0/1:15,0:15:43.69:44,0,108	1/1:16,1:16:44.83:703,45,0	1/1:17,0:16:41.63:819,42,0	1/1:10,0:10:3.96:113,4,0	1/1:17,0:17:43.37:454,43,0	1/1:17,0:17:21.04:305,21,0	1/1:12,0:11:1.19:115,1,0	1/1:21,0:21:39.50:427,40,0	1/1:27,0:26:53.72:595,54,0	1/1:15,0:15:18.81:213,19,0	0/1:7,0:7:22.34:22,0,59
chr10	28539666	.	GTTGTTGT	G	11700.81	PASS	AB=1.000;AC=48;AF=0.857;AN=56;BaseQRankSum=-2.932;DP=441;FS=6.821;HRun=0;HaplotypeScore=142.2482;InbreedingCoeff=0.3585;MQ=56.36;MQ0=7;MQRankSum=-2.450;QD=28.96;ReadPosRankSum=5.347;VQSLOD=3.8565;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:18:27.87:426,28,0	1/1:9,0:9:27.09:448,27,0	0/0:22,0:11:23.06:0,23,309	0/0:14,0:6:9.43:0,9,73	1/1:33,0:33:83.34:1081,83,0	1/1:22,0:22:33.10:463,33,0	1/1:13,0:13:20.74:280,21,0	1/1:10,0:9:23.60:305,24,0	1/1:10,0:9:21.99:380,22,0	1/1:9,7:16:42.11:658,42,0	1/1:15,0:14:32.84:431,33,0	1/1:7,0:7:11.59:255,12,0	1/1:12,0:12:29.91:339,30,0	1/1:8,0:8:17.57:273,18,0	1/1:14,0:14:7.37:369,7,0	1/1:18,1:19:54.03:783,54,0	0/1:21,0:21:45.19:331,0,45	0/1:15,0:15:20.63:146,0,21	0/1:17,0:16:9.69:361,0,10	1/1:17,0:16:17.12:533,17,0	0/1:10,0:10:24.36:65,0,24	1/1:16,1:17:48.12:745,48,0	1/1:17,0:17:41.08:522,41,0	1/1:12,0:11:19.35:229,19,0	1/1:21,0:21:59.38:832,59,0	1/1:20,7:26:70.93:1031,71,0	1/1:8,7:15:26.79:337,27,0	1/1:7,0:7:4.54:77,5,0
chr10	28539669	.	GTTGT	G	7804.31	PASS	AB=1.000;AC=49;AF=0.875;AN=56;BaseQRankSum=0.508;DP=436;FS=0.000;HRun=0;HaplotypeScore=133.9829;InbreedingCoeff=0.3905;MQ=56.78;MQ0=4;MQRankSum=-3.722;QD=19.32;ReadPosRankSum=5.051;VQSLOD=4.5436;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:21,0:20:10.36:174,0,10	1/1:4,6:10:27.03:349,27,0	0/0:19,0:9:17.66:0,18,210	0/0:13,0:6:8.45:0,8,48	1/1:33,0:33:60.14:493,60,0	1/1:22,0:22:32.79:249,33,0	1/1:13,0:13:20.60:151,21,0	1/1:9,0:8:23.92:252,24,0	1/1:11,0:10:14.90:184,15,0	1/1:12,4:16:41.96:498,42,0	1/1:3,11:14:32.67:334,33,0	1/1:7,0:7:8.95:111,9,0	1/1:12,2:13:31.29:261,31,0	1/1:7,1:8:5.40:201,5,0	1/1:13,2:15:17.34:296,17,0	1/1:10,8:18:53.81:608,54,0	1/1:20,0:20:10.92:198,11,0	1/1:16,0:16:6.79:104,7,0	0/1:18,0:18:44.92:145,0,45	1/1:17,0:16:15.77:257,16,0	0/1:10,0:10:25.19:25,0,36	1/1:10,7:17:47.86:581,48,0	1/1:15,2:17:44.02:402,44,0	1/1:9,2:10:19.14:171,19,0	1/1:10,12:22:55.94:655,56,0	1/1:15,11:26:70.57:820,71,0	1/1:11,4:15:26.76:245,27,0	1/1:2,1:3:2.54:42,3,0
chr10	28539670	.	TTG	T	4914.49	PASS	AB=1.000;AC=45;AF=0.804;AN=56;BaseQRankSum=3.635;DP=433;FS=10.705;HRun=0;HaplotypeScore=129.0179;InbreedingCoeff=0.3962;MQ=55.56;MQ0=4;MQRankSum=-4.846;QD=12.73;ReadPosRankSum=4.469;VQSLOD=3.8561;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:18,2:19:48.38:455,48,0	1/1:10,0:10:18.01:110,18,0	0/0:18,0:8:12.18:0,12,123	0/0:13,0:6:7.94:0,8,46	1/1:33,0:33:73.82:589,74,0	1/1:22,0:22:32.85:285,33,0	1/1:13,0:13:20.58:145,21,0	0/1:9,0:8:2.65:42,0,3	1/1:11,0:10:29.87:243,30,0	1/1:16,0:16:34.04:228,34,0	1/1:15,0:14:25.60:153,26,0	1/1:6,0:6:17.50:144,17,0	1/1:14,0:13:11.75:119,12,0	0/1:8,0:8:10.34:71,0,10	0/1:15,0:15:22.10:70,0,22	1/1:18,0:18:42.11:271,42,0	0/1:21,0:21:14.58:15,0,29	0/0:16,0:16:10.60:0,11,51	1/1:6,12:18:23.04:361,23,0	1/1:17,0:16:40.99:302,41,0	0/1:10,0:10:13.96:41,0,14	1/1:17,0:17:33.84:217,34,0	1/1:17,0:17:11.70:133,12,0	1/1:10,0:9:16.99:85,17,0	1/1:23,0:23:50.09:355,50,0	1/1:25,0:25:51.17:331,51,0	1/1:15,0:15:25.04:138,25,0	1/1:3,0:3:2.58:12,3,0
chr10	28539671	.	TG	T	3951.46	PASS	AB=1.000;AC=49;AF=0.875;AN=56;BaseQRankSum=2.048;DP=430;FS=1.742;HRun=1;HaplotypeScore=125.6214;InbreedingCoeff=0.3258;MQ=55.84;MQ0=3;MQRankSum=-2.689;QD=9.88;ReadPosRankSum=3.620;VQSLOD=1.7775;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:19:45.08:249,45,0	1/1:10,0:10:21.97:103,22,0	0/0:17,0:8:0.70:0,1,110	0/0:13,0:6:7.68:0,8,34	1/1:33,0:33:64.25:369,64,0	1/1:22,0:22:30.42:158,30,0	1/1:13,0:13:19.14:95,19,0	1/1:10,0:9:6.68:43,7,0	1/1:11,1:11:28.58:196,29,0	1/1:16,0:16:34.03:194,34,0	1/1:15,0:14:30.77:158,31,0	1/1:5,1:6:17.51:153,18,0	1/1:15,0:14:25.49:143,25,0	0/1:8,0:8:7.86:68,0,8	0/1:15,0:15:1.25:96,0,1	1/1:18,0:18:46.27:249,46,0	1/1:21,0:21:7.15:48,7,0	1/1:15,0:15:2.24:18,2,0	1/1:16,1:17:16.67:234,17,0	1/1:17,0:16:36.36:200,36,0	0/1:10,0:10:20.04:20,0,20	1/1:17,0:17:41.13:197,41,0	1/1:16,1:17:36.62:182,37,0	1/1:9,0:8:8.62:46,9,0	1/1:22,0:22:47.34:306,47,0	1/1:25,0:25:54.37:296,54,0	1/1:15,0:15:23.15:122,23,0	1/1:2,0:2:2.37:8,2,0
chr10	28539672	.	GT	G	3164.75	PASS	AB=0.881;AC=40;AF=0.714;AN=56;BaseQRankSum=1.404;DP=438;FS=5.776;HRun=11;HaplotypeScore=131.9155;InbreedingCoeff=0.4587;MQ=55.69;MQ0=4;MQRankSum=-3.689;QD=8.72;ReadPosRankSum=5.511;VQSLOD=1.8464;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:19:6.13:0,6,41	1/1:7,3:10:23.95:195,24,0	0/1:17,0:8:1.77:2,0,69	0/0:13,0:6:5.89:0,6,37	0/1:34,0:34:15.78:16,0,31	1/1:22,0:22:12.10:31,12,0	1/1:13,0:13:6.14:16,6,0	1/1:2,8:9:23.94:192,24,0	0/0:12,0:13:6.11:0,6,58	1/1:16,0:16:29.82:233,30,0	1/1:15,0:14:17.93:146,18,0	0/1:6,0:7:3.53:13,0,4	1/1:12,4:15:20.93:168,21,0	0/1:3,4:7:13.56:104,0,14	0/1:7,8:15:1.84:190,0,2	1/1:15,3:18:35.79:281,36,0	1/1:15,7:22:26.87:217,27,0	1/1:6,9:15:17.93:148,18,0	0/0:17,0:17:16.19:0,16,83	0/1:17,0:16:6.08:6,0,17	0/0:11,0:11:7.18:0,7,51	1/1:12,5:17:35.88:287,36,0	1/1:11,6:17:26.06:218,26,0	1/1:4,5:8:10.77:78,11,0	1/1:21,2:23:18.46:287,18,0	1/1:25,0:25:52.64:409,53,0	1/1:15,0:16:11.43:74,11,0	1/1:2,0:2:2.83:24,3,0
chr10	28543321	.	CTTGT	C	5550.57	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-3.192;DP=739;FS=4.281;HRun=0;HaplotypeScore=172.4545;InbreedingCoeff=0.9885;MQ=62.14;MQ0=1;MQRankSum=3.974;QD=22.03;ReadPosRankSum=3.945;VQSLOD=4.6246;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,30:44:87.29:1351,87,0	0/0:8,0:16:24.55:0,25,406	0/0:18,0:15:12.04:0,12,227	0/0:22,0:18:15.05:0,15,343	1/1:9,21:30:45.15:678,45,0	1/1:6,18:24:42.14:661,42,0	1/1:16,9:25:17.15:393,17,0	0/0:36,0:36:45.14:0,45,854	1/1:8,14:22:39.13:614,39,0	0/0:17,0:31:60.18:0,60,1010	0/0:11,0:18:32.91:0,33,427	1/1:11,17:29:39.13:595,39,0	0/0:9,0:22:36.12:0,36,628	0/0:16,0:30:51.17:0,51,900	0/0:13,0:28:42.14:0,42,748	0/0:14,0:22:27.09:0,27,474	0/0:34,0:34:45.11:0,45,1018	0/0:22,0:22:42.14:0,42,888	1/1:21,7:28:21.07:328,21,0	1/1:10,14:25:27.08:406,27,0	1/1:10,14:24:34.93:524,35,0	0/0:11,0:28:51.05:0,51,827	0/0:10,0:26:44.51:0,45,651	0/0:11,0:33:54.18:0,54,944	0/0:27,0:32:36.03:0,36,481	0/0:23,0:31:60.18:0,60,1070	0/0:17,0:29:41.93:0,42,638	0/0:1,0:8:18.06:0,18,314
chr10	28543715	.	AT	A	4786.02	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=11.899;DP=577;FS=6.360;HRun=10;HaplotypeScore=61.8835;InbreedingCoeff=0.9532;MQ=71.71;MQ0=0;MQRankSum=-2.432;QD=21.75;ReadPosRankSum=2.324;VQSLOD=5.9431;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,17:23:35.86:443,36,0	0/0:11,0:11:27.07:0,27,299	0/0:15,2:15:2.58:0,3,197	0/0:15,0:13:4.99:0,5,158	1/1:7,26:33:83.92:718,84,0	1/1:2,21:23:65.99:573,66,0	1/1:1,11:12:32.98:286,33,0	0/0:22,1:23:31.11:0,31,571	1/1:4,15:19:18.28:384,18,0	0/0:29,1:30:49.13:0,49,758	0/0:34,0:34:84.22:0,84,924	1/1:2,14:16:44.99:390,45,0	0/0:19,0:19:51.10:0,51,551	0/0:18,1:19:31.09:0,31,564	0/0:19,0:19:51.14:0,51,564	0/0:13,0:13:39.11:0,39,431	1/1:5,16:21:47.98:417,48,0	1/1:5,7:11:26.94:226,27,0	1/1:6,18:24:62.97:544,63,0	1/1:7,21:28:72.44:621,72,0	1/1:2,7:9:20.99:182,21,0	0/0:16,0:16:42.10:0,42,455	0/0:22,1:23:31.10:0,31,571	0/0:10,0:10:24.06:0,24,266	0/0:25,1:26:43.13:0,43,704	0/0:31,0:31:87.24:0,87,962	0/0:35,0:35:96.25:0,96,1052	0/0:15,0:16:38.94:0,39,412
chr10	28543790	.	A	ATTTTG	15795.41	PASS	AB=0.629;AC=21;AF=0.375;AN=56;BaseQRankSum=-11.382;DP=602;FS=0.341;HRun=0;HaplotypeScore=107.2665;InbreedingCoeff=0.9505;MQ=73.42;MQ0=0;MQRankSum=-6.982;QD=62.19;ReadPosRankSum=2.299;VQSLOD=5.5010;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,15:21:36.12:1035,36,0	0/0:9,0:9:27.09:0,27,539	0/0:21,0:21:33.51:0,34,774	0/0:17,0:15:26.93:0,27,514	1/1:8,28:39:99:2469,99,0	1/1:7,19:26:57.20:1708,57,0	1/1:3,19:24:51.18:1515,51,0	0/0:33,0:33:78.25:0,78,1461	0/1:9,13:22:2.51:1110,0,3	0/0:26,0:26:69.21:0,69,1270	0/0:19,0:19:39.12:0,39,743	1/1:6,16:22:57.20:1628,57,0	0/0:22,0:22:60.21:0,60,1175	0/0:20,0:20:51.17:0,51,1007	0/0:22,0:22:60.21:0,60,1165	0/0:16,0:16:48.16:0,48,925	1/1:3,14:17:39.13:1168,39,0	1/1:4,16:19:48.16:1385,48,0	1/1:6,11:18:41.81:1133,42,0	1/1:7,23:32:69.24:2014,69,0	1/1:5,7:13:21.07:630,21,0	0/0:16,0:16:42.14:0,42,829	0/0:21,0:21:57.20:0,57,1114	0/0:13,0:13:33.11:0,33,660	0/0:18,0:18:51.17:0,51,1009	0/0:27,0:27:69.23:0,69,1331	0/0:30,0:30:72.25:0,72,1399	0/0:18,0:18:48.16:0,48,860
chr10	28545903	.	AGGAGCCTGCGTGGATGTTCAGTTTCTC	A	27217.78	PASS	AC=46;AF=0.852;AN=54;BaseQRankSum=12.018;DP=444;FS=0.000;HRun=0;HaplotypeScore=309.6082;InbreedingCoeff=0.7236;MQ=78.60;MQ0=0;MQRankSum=-11.809;QD=82.48;ReadPosRankSum=5.279;VQSLOD=2.8490;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,5:18:12.04:714,12,0	1/1:1,7:8:15.05:1073,15,0	0/0:16,0:16:42.14:0,42,2697	0/0:15,0:15:42.14:0,42,3043	1/1:5,5:10:3.01:215,3,0	1/1:7,14:21:34:2363,34,0	1/1:7,10:17:12.04:858,12,0	1/1:13,0:13:1.24:23,1,0	1/1:7,8:15:21.07:1502,21,0	1/1:8,5:13:15.03:599,15,0	1/1:4,3:7:6.02:427,6,0	1/1:7,15:23:48.16:3433,48,0	1/1:8,14:22:24.08:1717,24,0	1/1:6,17:23:48.16:3387,48,0	1/1:8,17:25:42.14:2875,42,0	1/1:10,9:19:27.09:1932,27,0	0/0:50,0:50:99:0,132,12739	0/0:31,0:31:81.28:0,81,8882	1/1:4,4:8:12.02:495,12,0	./.	1/1:14,4:18:9.03:392,9,0	1/1:2,5:7:13.60:755,14,0	1/1:3,2:5:2.95:146,3,0	1/1:12,11:23:12.04:858,12,0	1/1:3,3:6:3.01:111,3,0	1/1:5,7:12:21.07:1197,21,0	1/1:4,11:15:24.08:1717,24,0	1/1:0,2:2:6.02:429,6,0
chr10	28550109	.	CTG	C	7433.65	PASS	AB=0.951;AC=22;AF=0.393;AN=56;BaseQRankSum=3.166;DP=911;FS=6.654;HRun=0;HaplotypeScore=206.1767;InbreedingCoeff=0.6889;MQ=52.85;MQ0=5;MQRankSum=3.038;QD=16.59;ReadPosRankSum=-0.352;VQSLOD=3.9599;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,20:40:74.84:856,75,0	0/0:13,0:13:24.08:0,24,385	0/1:28,3:13:12.43:12,0,220	0/1:27,0:15:15.20:15,0,209	1/1:3,22:26:47.98:560,48,0	1/1:4,23:27:57.17:680,57,0	1/1:5,22:28:46.38:547,46,0	0/0:50,2:50:33.31:0,33,1294	1/1:5,25:30:51.16:618,51,0	0/0:47,0:47:99:0,102,1612	0/0:18,0:18:44.89:0,45,687	1/1:10,20:32:74.89:854,75,0	0/0:23,1:23:14.80:0,15,706	0/0:27,1:28:14.72:0,15,1000	0/1:37,2:38:0.74:1,0,938	0/0:23,1:24:29.18:0,29,920	0/0:36,0:36:90.31:0,90,1437	0/1:30,2:31:24.91:25,0,1101	1/1:7,7:13:23.74:246,24,0	1/1:3,21:26:59.84:674,60,0	1/1:36,57:91:99:2344,198,0	0/0:27,2:29:1.37:0,1,967	0/0:19,0:19:51.16:0,51,785	0/0:64,0:64:99:0,135,2080	0/0:23,0:23:60.19:0,60,921	0/0:43,1:44:65.87:0,66,1500	0/0:27,1:28:32.60:0,33,927	0/0:13,1:14:5.68:0,6,557
chr10	28550157	.	TTG	T	7345.66	PASS	AB=0.913;AC=36;AF=0.643;AN=56;BaseQRankSum=-2.450;DP=888;FS=1.480;HRun=0;HaplotypeScore=199.2024;InbreedingCoeff=0.4528;MQ=58.04;MQ0=8;MQRankSum=0.306;QD=11.46;ReadPosRankSum=1.755;VQSLOD=4.3658;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:33,2:35:5.42:5,0,778	1/1:1,4:5:12.04:143,12,0	0/0:40,0:17:15.01:0,15,185	0/1:51,1:33:20.20:20,0,183	0/0:28,1:29:12.82:0,13,615	0/1:19,2:21:29.45:29,0,438	0/1:25,1:26:24.48:24,0,553	1/1:30,13:41:60.11:661,60,0	0/0:21,1:22:25.57:0,26,547	1/1:25,21:47:76.85:864,77,0	1/1:9,17:23:39.24:585,39,0	0/0:31,1:32:63.15:0,63,925	1/1:10,8:17:15.05:177,15,0	1/1:15,10:28:30.73:305,31,0	1/1:12,17:29:38.78:398,39,0	0/1:12,8:20:11.99:272,0,12	0/1:39,2:41:2.83:3,0,798	0/0:29,0:30:60.15:0,60,869	0/1:19,1:16:2.68:3,0,403	0/1:26,4:29:17.31:17,0,691	0/0:89,4:92:60.15:0,60,2191	1/1:11,16:27:45.05:504,45,0	1/1:13,15:27:44.95:514,45,0	1/1:24,35:61:87.51:1173,88,0	1/1:6,13:19:39.01:445,39,0	1/1:16,13:30:50.65:524,51,0	1/1:14,7:22:38.39:379,38,0	1/1:4,7:12:26.91:299,27,0
chr10	28550205	.	CTG	C	1220.16	PASS	AB=0.923;AC=6;AF=0.107;AN=56;BaseQRankSum=4.250;DP=865;FS=11.802;HRun=0;HaplotypeScore=164.6477;InbreedingCoeff=0.5879;MQ=54.58;MQ0=18;MQRankSum=-1.276;QD=11.96;ReadPosRankSum=2.432;VQSLOD=2.9192;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,1:39:53.59:0,54,1229	0/0:14,0:14:37.41:0,37,502	0/0:34,0:4:8.99:0,9,96	0/0:42,0:16:17.73:0,18,142	0/0:17,0:17:38.61:0,39,415	0/0:16,0:16:30.07:0,30,460	0/0:28,0:28:41.95:0,42,1059	0/0:31,0:31:27.79:0,28,803	0/0:25,0:25:63.21:0,63,1002	0/0:40,2:42:4.22:0,4,912	0/0:27,0:25:57.13:0,57,835	0/0:31,1:31:24.12:0,24,765	0/0:26,0:25:56.51:0,57,755	0/0:30,0:30:71.33:0,71,983	0/0:29,1:30:23.77:0,24,777	0/0:27,0:27:67.35:0,67,1012	1/1:10,30:40:59.77:700,60,0	1/1:14,13:27:35.81:598,36,0	0/1:20,2:18:48.89:49,0,324	0/0:28,0:27:21.96:0,22,713	0/0:93,1:92:99:0,149,2599	0/0:29,0:29:29.58:0,30,955	0/0:28,0:27:48.12:0,48,693	0/0:53,1:53:62.81:0,63,1580	0/0:20,1:21:12.27:0,12,687	0/0:36,1:36:56.62:0,57,1267	0/0:12,0:12:32.32:0,32,486	0/1:12,1:13:6.81:7,0,378
chr10	28550319	.	CTG	C	11972.15	PASS	AB=0.881;AC=33;AF=0.589;AN=56;BaseQRankSum=12.910;DP=967;FS=0.891;HRun=0;HaplotypeScore=150.2686;InbreedingCoeff=0.7521;MQ=54.81;MQ0=21;MQRankSum=1.288;QD=22.05;ReadPosRankSum=3.390;VQSLOD=5.5640;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,2:41:62.12:0,62,1492	1/1:2,13:15:39.04:449,39,0	0/0:41,0:7:14.30:0,14,182	0/0:32,0:14:9.58:0,10,302	0/0:29,0:28:4.95:0,5,586	0/0:19,0:19:54.18:0,54,876	0/0:42,1:43:65.13:0,65,1554	1/1:7,23:27:56.98:658,57,0	0/0:34,1:34:44.08:0,44,1227	1/1:7,34:41:99:1266,105,0	1/1:4,18:22:45.14:558,45,0	0/0:46,1:47:77.18:0,77,1758	1/1:4,22:27:59.89:719,60,0	1/1:4,30:34:70.62:991,71,0	1/1:11,37:47:93.25:1136,93,0	1/1:8,24:33:32.98:883,33,0	0/0:36,1:37:59.10:0,59,1462	0/1:21,4:25:99:101,0,593	0/1:15,3:16:72.55:73,0,398	0/1:22,2:24:14.16:14,0,811	0/0:98,2:100:99:0,173,3820	1/1:10,25:37:62.86:735,63,0	1/1:5,21:26:39.06:452,39,0	1/1:9,46:54:99:1376,111,0	1/1:5,18:25:44.76:494,45,0	1/1:13,31:43:90.27:1101,90,0	1/1:2,22:24:54.17:669,54,0	1/1:3,10:13:24.08:298,24,0
chr10	28551237	.	T	TGTCTGGCGGA	46462.06	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-6.705;DP=705;FS=7.693;HRun=0;HaplotypeScore=198.0482;InbreedingCoeff=0.8570;MQ=65.53;MQ0=2;MQRankSum=-9.239;QD=70.08;ReadPosRankSum=3.264;VQSLOD=4.1503;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:23,10:47:47.91:1418,48,0	1/1:2,5:7:21.03:952,21,0	0/0:23,0:23:54.17:0,54,1322	0/0:19,0:19:25.59:0,26,1043	1/1:10,9:27:20.90:851,21,0	1/1:10,16:33:63.13:2821,63,0	1/1:16,8:30:39.09:1565,39,0	1/1:29,3:35:78.18:2482,78,0	1/1:14,16:32:60.20:2828,60,0	1/1:11,5:19:33.10:1370,33,0	1/1:4,6:13:15.05:775,15,0	1/1:13,14:36:53.82:2768,54,0	1/1:11,15:32:48.16:2279,48,0	1/1:13,14:30:69.24:3279,69,0	1/1:9,25:38:81.28:3963,81,0	1/1:13,14:30:63.21:2701,63,0	1/1:8,15:24:51.18:2534,51,0	1/1:5,8:17:36.12:1740,36,0	1/1:17,2:25:57.15:1980,57,0	1/1:14,2:20:12:419,12,0	1/1:15,2:26:14.14:603,14,0	1/1:5,6:22:21.07:1080,21,0	1/1:5,2:9:9.03:422,9,0	1/1:8,10:19:24.08:1075,24,0	1/1:10,7:22:30.10:1422,30,0	1/1:23,6:35:66.13:2422,66,0	1/1:12,17:30:51.18:2559,51,0	1/1:0,2:3:3.01:155,3,0
chr10	28551239	.	T	TCTGGCGGAGG	40271.26	PASS	AB=0.955;AC=51;AF=0.911;AN=56;BaseQRankSum=-4.608;DP=624;FS=5.710;HRun=0;HaplotypeScore=211.5274;InbreedingCoeff=0.6592;MQ=66.24;MQ0=2;MQRankSum=-9.930;QD=68.96;ReadPosRankSum=6.177;VQSLOD=4.1841;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:39,0:38:47.71:1239,48,0	1/1:7,0:7:21.03:841,21,0	0/0:22,0:22:54.18:0,54,1388	0/0:18,0:18:25.38:0,25,1054	1/1:22,0:22:17.69:706,18,0	1/1:28,0:28:41.14:2449,41,0	1/1:25,2:27:39.09:1404,39,0	1/1:32,0:32:44.63:1996,45,0	1/1:29,0:29:60.20:2484,60,0	1/1:16,0:16:27.09:1118,27,0	1/1:11,0:11:15.05:688,15,0	1/1:31,0:31:53.78:2464,54,0	1/1:25,1:26:48.16:2017,48,0	1/1:29,1:31:69.24:2924,69,0	1/1:38,0:38:59.29:3451,59,0	1/1:28,0:28:63.21:2356,63,0	1/1:22,0:21:51.18:2223,51,0	1/1:15,0:15:36.12:1495,36,0	1/1:25,0:25:52.53:1678,53,0	1/1:18,0:18:12:364,12,0	0/1:20,1:21:6.12:496,0,6	1/1:14,0:14:21.07:957,21,0	1/1:8,0:8:9.03:368,9,0	1/1:19,0:19:2.09:924,2,0	1/1:18,0:18:30.10:1239,30,0	1/1:30,0:30:57.11:2017,57,0	1/1:28,0:28:30.20:2236,30,0	1/1:1,0:1:3.01:137,3,0
chr10	28553165	.	TC	T	21078.94	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-0.897;DP=697;FS=4.747;HRun=4;HaplotypeScore=68.5448;InbreedingCoeff=0.9782;MQ=79.87;MQ0=0;MQRankSum=-8.934;QD=31.79;ReadPosRankSum=5.115;VQSLOD=5.3187;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,22:22:60.18:720,60,0	1/1:0,11:11:33.10:396,33,0	0/0:15,0:15:42.11:0,42,539	0/0:19,0:16:16.48:0,16,515	1/1:1,28:29:83.74:934,84,0	1/1:0,32:32:93.29:1115,93,0	1/1:2,24:26:66.20:792,66,0	1/1:2,36:38:99:1240,108,0	1/1:1,36:37:93.29:1115,93,0	1/1:0,27:27:81.22:949,81,0	1/1:1,29:30:84.17:975,84,0	1/1:0,25:25:63.19:756,63,0	1/1:1,31:32:84.07:1007,84,0	1/1:0,25:25:63.19:756,63,0	1/1:0,27:27:75.23:900,75,0	1/1:0,23:23:54.17:648,54,0	1/1:2,21:23:63.19:756,63,0	1/1:0,18:18:54.17:648,54,0	1/1:0,16:16:48.15:576,48,0	1/1:0,33:33:99:1187,99,0	1/1:0,22:22:63.19:756,63,0	1/1:3,21:24:57.17:683,57,0	1/1:3,26:29:63.14:739,63,0	1/1:2,15:17:36.11:432,36,0	1/1:0,21:21:60.18:720,60,0	1/1:0,25:25:75.21:879,75,0	1/1:2,39:41:99:1259,105,0	1/1:1,9:10:12.04:144,12,0
chr10	28554677	.	TGA	T	19521.90	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=15.689;DP=726;FS=8.036;HRun=0;HaplotypeScore=89.1547;InbreedingCoeff=0.9955;MQ=83.91;MQ0=3;MQRankSum=-4.658;QD=43.38;ReadPosRankSum=3.712;VQSLOD=6.1589;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,120,2385	1/1:0,16:16:48.16:783,48,0	0/0:20,0:20:48.21:0,48,1117	0/0:27,0:27:78.26:0,78,1516	0/0:28,0:28:84.29:0,84,1649	0/0:22,0:22:66.21:0,66,1304	0/0:12,0:12:36.11:0,36,696	1/1:0,33:33:96.27:1491,96,0	0/0:30,0:30:87.30:0,87,1750	1/1:0,26:26:78.27:1273,78,0	1/1:0,19:19:57.19:917,57,0	0/0:22,0:22:66.23:0,66,1317	1/1:0,25:25:66.23:1077,66,0	1/1:0,35:35:93.32:1517,93,0	1/1:0,28:28:66.23:1077,66,0	1/1:1,32:32:29.33:1359,29,0	1/1:0,46:44:99:1860,114,0	1/1:0,23:23:60.20:979,60,0	0/0:21,0:21:63.22:0,63,1256	0/0:25,0:25:75.26:0,75,1523	0/0:28,0:28:84.27:0,84,1630	1/1:0,25:25:66.18:1035,66,0	1/1:0,19:19:54.18:880,54,0	1/1:0,26:26:69.24:1126,69,0	1/1:0,35:35:87.30:1420,87,0	1/1:0,30:30:87.30:1407,87,0	1/1:0,27:27:69.24:1126,69,0	1/1:0,4:4:12.04:196,12,0
chr10	28556326	.	G	GTTT	4538.33	PASS	AB=0.960;AC=36;AF=0.643;AN=56;BaseQRankSum=-3.931;DP=588;FS=3.530;HRun=15;HaplotypeScore=131.9186;InbreedingCoeff=-0.1057;MQ=72.82;MQ0=1;MQRankSum=-4.092;QD=8.48;ReadPosRankSum=-7.050;VQSLOD=-0.4126;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:11,1:30:24.53:307,25,0	0/1:8,0:9:9.15:9,0,14	0/0:21,0:16:8.53:0,9,86	0/0:9,0:10:8.65:0,9,83	1/1:19,13:35:65.63:779,66,0	1/1:7,0:17:21.03:249,21,0	1/1:9,12:21:24:319,24,0	0/1:41,0:42:89.71:90,0,143	1/1:1,7:11:12.04:178,12,0	0/0:18,0:20:13.66:0,14,68	0/1:14,0:14:24.49:24,0,73	1/1:9,1:10:18.03:210,18,0	0/1:17,0:18:19:19,0,69	0/1:20,0:20:33.66:34,0,65	0/1:16,0:16:21.35:21,0,42	0/1:11,0:12:9.84:10,0,94	1/1:10,0:29:13.26:96,13,0	1/1:11,0:13:22.59:170,23,0	1/1:13,5:21:28.62:397,29,0	1/1:17,3:31:66.17:881,66,0	1/1:7,6:15:9.92:126,10,0	0/1:19,0:19:25.75:26,0,73	0/1:32,0:32:84.08:161,0,84	0/1:17,0:19:65.31:65,0,67	0/1:19,0:20:41.83:128,0,42	0/1:35,0:36:61.97:64,0,62	0/1:30,0:29:56.16:67,0,56	0/1:10,0:12:30.28:109,0,30
chr10	28556341	.	TA	T	2152.71	PASS	AB=0.917;AC=33;AF=0.589;AN=56;BaseQRankSum=-0.333;DP=504;FS=9.865;HRun=3;HaplotypeScore=81.7855;InbreedingCoeff=0.8741;MQ=72.87;MQ0=1;MQRankSum=2.298;QD=6.88;ReadPosRankSum=1.404;VQSLOD=-0.1374;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:38.76:0,39,307	1/1:8,1:9:14.92:121,15,0	0/0:19,0:12:23.44:0,23,233	0/0:11,0:11:8.08:0,8,81	0/0:23,0:23:25.25:0,25,305	0/0:14,0:14:26.89:0,27,232	0/0:17,0:17:27.27:0,27,228	1/1:32,3:35:49.80:368,50,0	0/0:16,0:15:26.92:0,27,216	1/1:13,1:14:20.97:136,21,0	0/1:10,1:11:2.35:53,0,2	0/0:13,0:13:26.83:0,27,215	1/1:17,1:18:9.68:125,10,0	1/1:17,1:18:10.26:69,10,0	1/1:17,1:18:28.08:267,28,0	1/1:13,0:13:10.73:69,11,0	1/1:24,0:24:14.19:87,14,0	1/1:11,0:11:12.18:67,12,0	0/0:15,0:15:30.48:0,30,313	0/0:24,0:24:43.90:0,44,505	0/0:16,0:15:21.20:0,21,189	1/1:21,1:22:35.68:276,36,0	1/1:26,1:27:1.41:133,1,0	1/1:21,0:21:13.20:106,13,0	1/1:17,1:18:20.04:130,20,0	1/1:20,0:20:16.16:67,16,0	1/1:20,1:21:19.09:154,19,0	1/1:12,1:13:17.46:144,17,0
chr10	28556618	.	G	GA	1071.43	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-5.712;DP=556;FS=1.456;HRun=7;HaplotypeScore=62.4388;InbreedingCoeff=0.9946;MQ=85.94;MQ0=0;MQRankSum=0.141;QD=29.76;ReadPosRankSum=2.029;VQSLOD=4.2820;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:81.12:0,81,776	0/0:10,0:10:30.05:0,30,289	0/0:25,0:25:62.91:0,63,548	0/0:17,0:16:38.86:0,39,344	0/0:23,0:23:51.07:0,51,492	0/0:17,0:17:45.07:0,45,435	0/0:30,0:30:78.12:0,78,753	0/0:32,0:32:72.10:0,72,695	0/0:16,0:16:48.07:0,48,458	0/0:30,0:30:81.11:0,81,778	0/0:17,0:17:42.07:0,42,405	0/0:25,0:25:62.93:0,63,599	0/0:16,0:16:39.05:0,39,371	0/0:14,0:14:24.03:0,24,232	0/0:26,0:26:69.09:0,69,661	0/0:24,0:24:72.12:0,72,695	1/1:2,24:26:72.22:867,72,0	1/1:1,9:10:27.08:326,27,0	0/0:11,0:11:24.03:0,24,232	0/0:24,0:24:69.11:0,69,666	0/0:25,0:25:66.10:0,66,637	0/0:16,0:16:33.05:0,33,319	0/0:16,0:16:42.06:0,42,405	0/0:11,0:10:33.05:0,33,319	0/0:11,0:11:24.02:0,24,225	0/0:25,0:25:72.10:0,72,691	0/0:23,0:23:57.09:0,57,550	0/0:8,0:8:24.04:0,24,232
chr10	28556691	.	A	AT	14136.19	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-7.193;DP=592;FS=2.683;HRun=9;HaplotypeScore=59.1528;InbreedingCoeff=0.9945;MQ=75.20;MQ0=0;MQRankSum=-7.890;QD=25.33;ReadPosRankSum=4.598;VQSLOD=5.4134;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,16:20:53.96:569,54,0	1/1:0,14:14:39.11:431,39,0	0/0:16,0:16:26.28:0,26,220	0/0:18,0:18:34.01:0,34,297	1/1:6,30:36:84.23:929,84,0	1/1:5,27:32:69.19:763,69,0	1/1:1,14:16:29.91:313,30,0	1/1:6,31:37:93.16:994,93,0	1/1:1,11:12:27.07:299,27,0	1/1:6,15:21:45.12:498,45,0	1/1:3,24:27:60.16:664,60,0	1/1:2,19:21:51.14:564,51,0	1/1:3,9:12:24.06:263,24,0	1/1:0,15:15:42.11:465,42,0	1/1:3,22:26:53.98:578,54,0	1/1:0,16:16:48.13:531,48,0	1/1:7,16:24:27.91:510,28,0	1/1:1,19:20:45.12:498,45,0	1/1:3,16:20:28.18:517,28,0	1/1:6,25:31:66.18:730,66,0	1/1:5,11:16:30.08:332,30,0	1/1:2,20:22:51.14:564,51,0	1/1:3,9:12:21.94:234,22,0	1/1:1,18:19:48.13:531,48,0	1/1:1,23:24:60.16:662,60,0	1/1:3,26:29:49.15:770,49,0	1/1:3,15:18:38.97:431,39,0	1/1:2,16:18:45.12:498,45,0
chr10	28557189	.	GTGATGGTGA	G	3034.04	PASS	AB=0.837;AC=27;AF=0.519;AN=52;BaseQRankSum=12.026;DP=541;FS=13.143;HRun=0;HaplotypeScore=139.5116;InbreedingCoeff=0.6979;MQ=47.98;MQ0=16;MQRankSum=-7.698;QD=18.06;ReadPosRankSum=1.780;VQSLOD=1.6140;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:87.30:0,87,3152	1/1:0,5:5:12.04:305,12,0	0/0:69,0:19:40.10:0,40,1106	0/0:59,0:26:57.19:0,57,1672	0/0:8,0:8:21.07:0,21,659	0/0:25,0:24:60.19:0,60,1805	0/0:31,0:31:87.30:0,87,2574	1/1:1,0:11:26.29:239,26,0	0/0:30,0:30:87.30:0,87,3131	1/1:7,0:7:6.48:62,6,0	1/1:4,0:3:5.93:56,6,0	0/0:38,0:38:99:0,108,3767	1/1:2,20:22:29.34:647,29,0	1/1:1,14:15:11.67:288,12,0	1/1:1,8:9:9.50:271,10,0	1/1:2,17:19:18.53:495,19,0	0/1:12,0:12:19.37:116,0,19	0/1:9,0:9:61.93:62,0,81	0/0:16,0:16:42.12:0,42,1133	0/0:13,0:13:36.12:0,36,1298	0/0:50,0:48:99:0,126,4028	./.	1/1:0,5:5:3.01:33,3,0	0/1:1,20:21:0:0,0,0	1/1:0,7:7:12.04:353,12,0	1/1:1,13:14:4.99:222,5,0	1/1:2,6:8:3.01:78,3,0	./.
chr10	28557949	.	CT	C	11611.26	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=19.242;DP=541;FS=7.339;HRun=1;HaplotypeScore=124.3745;InbreedingCoeff=0.9971;MQ=92.74;MQ0=0;MQRankSum=-7.018;QD=39.63;ReadPosRankSum=4.278;VQSLOD=3.9264;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:72.25:0,72,1151	1/1:0,8:8:24.08:334,24,0	0/0:27,0:27:81.27:0,81,1266	0/0:22,0:22:66.22:0,66,1007	0/0:19,0:19:57.19:0,57,909	0/0:26,0:26:78.27:0,78,1245	0/0:20,0:20:60.20:0,60,959	1/1:0,12:12:36.12:503,36,0	0/0:18,0:18:54.18:0,54,863	1/1:0,15:15:45.12:595,45,0	1/1:0,12:12:33.11:460,33,0	0/0:24,0:24:72.23:0,72,1128	1/1:0,20:20:60.20:837,60,0	1/1:0,30:30:87.29:1208,87,0	1/1:0,26:26:75.25:1047,75,0	1/1:0,25:25:72.24:1005,72,0	1/1:1,21:22:60.20:839,60,0	1/1:0,23:23:69.23:964,69,0	0/0:19,0:19:54.18:0,54,864	0/0:17,0:17:51.17:0,51,815	0/0:30,0:30:90.31:0,90,1439	1/1:0,11:11:29.65:419,30,0	1/1:0,15:15:30.08:419,30,0	1/1:0,14:14:42.14:586,42,0	1/1:0,10:10:30.10:419,30,0	1/1:0,25:25:75.22:1014,75,0	1/1:0,20:20:54.18:754,54,0	1/1:0,5:5:15.05:209,15,0
chr10	28558512	.	AAT	A	109.98	PASS	AC=2;AF=0.040;AN=50;BaseQRankSum=3.127;DP=192;FS=7.858;HRun=0;HaplotypeScore=26.1727;InbreedingCoeff=0.4036;MQ=64.08;MQ0=0;MQRankSum=-0.879;QD=18.33;ReadPosRankSum=0.302;VQSLOD=1.8018;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:33.11:0,33,566	0/0:2,0:2:3.01:0,3,51	0/0:2,0:2:2.97:0,3,20	./.	1/1:1,5:6:15.05:197,15,0	0/0:11,0:10:30.10:0,30,511	0/0:1,0:1:3.01:0,3,51	0/0:27,0:27:60.21:0,60,1015	0/0:6,0:6:18.06:0,18,307	0/0:7,0:7:21.07:0,21,360	0/0:6,0:6:18.06:0,18,308	0/0:5,0:5:12.04:0,12,205	0/0:1,0:1:3.01:0,3,51	0/0:4,0:4:9.03:0,9,154	0/0:6,0:6:18.06:0,18,302	0/0:2,0:2:6.02:0,6,103	0/0:23,0:23:60.18:0,60,998	0/0:20,0:20:48.16:0,48,814	0/0:12,0:12:33.11:0,33,566	0/0:3,0:3:9.03:0,9,154	0/0:2,0:2:6.02:0,6,103	./.	./.	0/0:3,0:3:6.02:0,6,103	0/0:6,0:6:18.06:0,18,309	0/0:6,0:6:18.06:0,18,303	0/0:10,0:10:27.09:0,27,463	0/0:8,0:8:21.07:0,21,360
chr10	28560144	.	AGGCTT	A	15219.55	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=15.085;DP=551;FS=7.153;HRun=0;HaplotypeScore=115.0587;InbreedingCoeff=0.9824;MQ=75.37;MQ0=0;MQRankSum=-9.831;QD=49.90;ReadPosRankSum=2.826;VQSLOD=4.8775;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,102,3135	1/1:1,3:4:6.02:130,6,0	0/0:20,0:18:45.12:0,45,1246	0/0:21,0:19:53.62:0,54,1384	0/0:20,0:20:60.21:0,60,1832	0/0:19,0:19:57.20:0,57,1808	0/0:16,0:16:42.10:0,42,1258	1/1:4,30:34:87.27:1778,87,0	0/0:30,0:30:87.26:0,87,2580	1/1:5,16:21:54.19:1172,54,0	1/1:0,11:11:27.09:586,27,0	0/0:26,0:26:75.26:0,75,2253	1/1:0,12:12:30.10:623,30,0	1/1:0,14:15:42.14:884,42,0	1/1:0,22:22:54.19:1172,54,0	1/1:0,19:19:45.15:950,45,0	1/1:2,15:17:39.13:821,39,0	1/1:1,11:12:27.09:586,27,0	0/0:17,0:17:48.16:0,48,1449	0/0:22,0:22:66.23:0,66,1989	0/0:21,0:21:57.20:0,57,1773	1/1:1,20:21:51.18:1107,51,0	1/1:0,22:22:50.76:1106,51,0	1/1:1,10:11:15.52:326,16,0	1/1:4,22:26:51.18:1107,51,0	1/1:3,20:23:60.21:1244,60,0	1/1:5,22:27:51.18:1106,51,0	1/1:0,8:8:24.08:521,24,0
chr10	28560284	.	GA	G	7536.75	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=12.543;DP=640;FS=8.377;HRun=9;HaplotypeScore=95.7590;InbreedingCoeff=0.9983;MQ=76.51;MQ0=3;MQRankSum=-2.844;QD=23.63;ReadPosRankSum=2.919;VQSLOD=5.1211;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:95.30:0,95,1091	1/1:3,6:9:18.01:165,18,0	0/0:55,0:41:68.25:0,68,596	0/0:57,1:41:26.89:0,27,501	0/0:22,0:23:60.01:0,60,671	0/0:15,0:15:45.09:0,45,504	0/0:21,0:21:53.42:0,53,651	1/1:6,23:29:68.22:601,68,0	0/0:28,0:28:81.23:0,81,925	1/1:3,21:24:60.02:549,60,0	1/1:0,24:24:69.04:631,69,0	0/0:26,0:26:66.20:0,66,761	1/1:1,13:14:39.02:357,39,0	1/1:0,15:15:42.02:384,42,0	1/1:3,17:20:48.03:439,48,0	1/1:4,26:30:75.04:686,75,0	1/1:1,12:13:36.02:329,36,0	1/1:2,19:21:48.02:439,48,0	0/0:24,0:24:57.17:0,57,657	0/0:23,0:25:60.01:0,60,672	0/0:8,0:8:24.07:0,24,277	1/1:1,13:14:39.02:357,39,0	1/1:2,22:24:65.92:595,66,0	1/1:1,19:20:54.03:494,54,0	1/1:2,13:15:39.02:357,39,0	1/1:2,14:16:42.02:384,42,0	1/1:3,17:20:51.03:467,51,0	1/1:0,11:11:33.02:302,33,0
chr10	28562368	.	TA	T	15455.46	PASS	AB=0.875;AC=55;AF=0.982;AN=56;BaseQRankSum=0.041;DP=482;FS=0.000;HRun=1;HaplotypeScore=234.0224;InbreedingCoeff=-0.0212;MQ=44.81;MQ0=0;MQRankSum=-2.254;QD=32.07;ReadPosRankSum=1.999;VQSLOD=4.2650;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:13:36.11:420,36,0	1/1:5,0:5:15.04:175,15,0	1/1:7,0:6:17.07:169,17,0	0/1:12,2:12:45.20:185,0,45	1/1:20,0:20:48.14:557,48,0	1/1:27,0:27:77.68:880,78,0	1/1:16,0:16:44.74:521,45,0	1/1:31,0:31:90.27:1041,90,0	1/1:33,0:32:96.28:1117,96,0	1/1:23,0:23:69.20:800,69,0	1/1:13,1:14:33.10:383,33,0	1/1:16,0:16:48.10:543,48,0	1/1:22,1:23:66.20:767,66,0	1/1:14,1:15:45.13:525,45,0	1/1:29,0:29:87.26:1011,87,0	1/1:24,0:24:69.16:786,69,0	1/1:9,0:9:27.08:315,27,0	1/1:4,0:4:12.04:139,12,0	1/1:20,0:20:60.18:694,60,0	1/1:24,0:24:72.17:820,72,0	1/1:7,0:7:18.05:210,18,0	1/1:13,0:13:33.10:385,33,0	1/1:13,0:13:36.09:406,36,0	1/1:14,0:14:24:252,24,0	1/1:16,0:16:48.12:543,48,0	1/1:18,0:18:54.16:627,54,0	1/1:29,0:29:87.26:1010,87,0	1/1:5,0:5:15.04:175,15,0
chr10	28563169	.	A	AT	5986.86	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-12.445;DP=316;FS=29.845;HRun=6;HaplotypeScore=30.7924;InbreedingCoeff=0.9595;MQ=78.11;MQ0=0;MQRankSum=-2.676;QD=33.08;ReadPosRankSum=0.148;VQSLOD=2.5202;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:42.10:0,42,428	1/1:0,3:3:9.03:113,9,0	0/0:11,0:11:21.01:0,21,198	0/0:12,0:12:24.04:0,24,238	0/0:10,0:10:27.06:0,27,275	0/0:19,0:19:51.11:0,51,519	0/0:8,0:8:18.04:0,18,184	1/1:6,27:33:81.26:1019,81,0	0/0:12,0:12:33.07:0,33,337	1/1:0,6:6:18.06:226,18,0	1/1:1,10:11:33.11:414,33,0	0/0:11,0:11:33.06:0,33,329	1/1:0,4:4:6.02:75,6,0	1/1:1,5:6:15.05:189,15,0	1/1:1,4:5:12.04:151,12,0	1/1:0,7:7:21.07:264,21,0	1/1:1,15:16:45.14:566,45,0	1/1:1,10:11:33.10:407,33,0	0/0:12,0:12:33.07:0,33,336	0/0:12,0:12:36.08:0,36,367	0/0:14,0:14:39.08:0,39,398	1/1:2,2:4:12.04:147,12,0	1/1:0,9:9:24.08:302,24,0	1/1:1,9:10:24.08:302,24,0	1/1:0,7:7:21.07:264,21,0	1/1:2,15:17:45.14:566,45,0	1/1:2,8:10:18.06:226,18,0	1/1:1,21:22:60.19:755,60,0
chr10	28564439	.	GA	G	922.61	PASS	AB=0.837;AC=18;AF=0.321;AN=56;BaseQRankSum=6.546;DP=392;FS=191.691;HRun=2;HaplotypeScore=134.6038;InbreedingCoeff=-0.4865;MQ=50.57;MQ0=4;MQRankSum=-8.433;QD=3.74;ReadPosRankSum=-5.478;VQSLOD=-0.5042;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:20,2:20:7.62:8,0,540	0/1:2,1:3:27.25:27,0,78	0/0:8,0:8:15.94:0,16,220	0/1:17,1:14:23.16:23,0,210	0/0:4,0:4:6.49:0,6,89	0/0:10,0:9:26.17:0,26,272	0/1:20,3:22:91.76:92,0,509	0/1:24,2:20:33.92:34,0,422	0/1:6,4:10:94.82:95,0,198	0/1:17,1:18:36.93:37,0,474	0/0:10,1:12:20.75:0,21,257	0/1:7,5:12:99:143,0,190	0/1:9,3:12:90.52:91,0,241	0/1:10,0:10:53.17:53,0,238	0/1:11,1:11:11.07:11,0,262	0/1:12,5:16:99:116,0,314	0/0:16,3:18:4.83:0,5,352	0/0:19,1:20:10.57:0,11,522	0/1:8,2:9:99:100,0,108	0/0:5,1:6:15.05:0,15,220	0/0:18,5:23:5.30:0,5,467	0/1:10,3:13:5.62:6,0,245	0/0:20,3:21:11.18:0,11,629	0/0:16,3:18:26.88:0,27,398	0/1:9,2:11:9.37:9,0,244	0/1:11,1:12:24.57:25,0,368	0/1:6,7:13:99:150,0,229	0/1:3,2:5:58.21:58,0,116
chr10	28566295	.	A	AT	10664.20	PASS	AB=0.545;AC=33;AF=0.589;AN=56;BaseQRankSum=-13.583;DP=621;FS=3.622;HRun=8;HaplotypeScore=59.4597;InbreedingCoeff=0.9203;MQ=76.51;MQ0=1;MQRankSum=0.759;QD=29.38;ReadPosRankSum=2.565;VQSLOD=5.1260;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,120,1098	0/1:1,5:6:15.70:92,0,16	0/0:15,0:15:32.89:0,33,281	0/0:14,0:14:9.44:0,9,203	0/0:21,0:21:48.02:0,48,439	0/0:16,0:16:42.02:0,42,384	0/0:38,0:38:99:0,105,956	1/1:2,29:31:84.22:948,84,0	0/0:23,0:23:60.02:0,60,549	1/1:4,18:22:54.16:623,54,0	1/1:3,14:17:45.13:517,45,0	0/0:22,0:22:57:0,57,512	1/1:2,21:23:69.20:788,69,0	1/1:5,26:30:47.76:803,48,0	1/1:1,16:17:45.13:518,45,0	1/1:3,17:20:44.55:548,45,0	1/1:1,22:23:57.17:658,57,0	1/1:1,15:16:45.13:519,45,0	0/0:18,0:18:48.01:0,48,436	0/0:21,0:21:57.03:0,57,520	0/0:27,0:27:72:0,72,652	1/1:3,18:22:57.17:657,57,0	1/1:8,20:28:35.72:664,36,0	1/1:1,26:27:75.22:866,75,0	1/1:3,22:25:66.19:754,66,0	1/1:1,22:23:69.17:773,69,0	1/1:2,21:23:54.16:623,54,0	1/1:0,9:9:27.08:312,27,0
chr10	28566460	.	C	CT	7183.25	PASS	AB=0.695;AC=49;AF=0.875;AN=56;BaseQRankSum=-5.976;DP=539;FS=0.000;HRun=12;HaplotypeScore=75.6749;InbreedingCoeff=0.1052;MQ=72.94;MQ0=0;MQRankSum=-1.577;QD=13.63;ReadPosRankSum=1.401;VQSLOD=5.2106;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,22:31:35.11:534,35,0	1/1:2,7:10:14.86:131,15,0	0/1:9,0:10:13.58:14,0,64	0/0:12,0:11:12.75:0,13,80	1/1:7,10:16:27.04:263,27,0	1/1:5,11:16:8.14:241,8,0	1/1:4,12:16:8.97:233,9,0	1/1:9,22:34:46.59:557,47,0	1/1:9,17:27:1.11:321,1,0	0/1:14,11:27:10.24:301,0,10	1/1:8,15:24:5.86:277,6,0	1/1:2,11:13:18.03:175,18,0	1/1:8,20:28:39:362,39,0	1/1:5,8:14:18.34:161,18,0	1/1:7,10:16:17.11:318,17,0	1/1:4,6:11:23.87:215,24,0	0/1:12,18:34:29.60:411,0,30	1/1:8,8:18:16.51:299,17,0	1/1:12,12:26:16.80:291,17,0	1/1:3,17:20:35.97:331,36,0	1/1:7,0:8:7.11:38,7,0	1/1:7,10:18:24.90:270,25,0	1/1:7,15:22:5.01:212,5,0	0/1:6,12:18:15.88:179,0,16	0/1:5,12:18:4.95:253,0,5	1/1:3,13:16:32.96:301,33,0	1/1:8,16:24:17.87:314,18,0	1/1:2,6:10:4.80:182,5,0
chr10	28568630	.	GCACTC	G	8724.34	PASS	AB=0.532;AC=17;AF=0.304;AN=56;BaseQRankSum=16.722;DP=698;FS=1.124;HRun=0;HaplotypeScore=155.5855;InbreedingCoeff=0.9132;MQ=83.06;MQ0=0;MQRankSum=-17.692;QD=39.48;ReadPosRankSum=1.850;VQSLOD=4.8178;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,27:30:51.18:1053,51,0	0/0:14,0:14:42.14:0,42,1227	0/0:22,0:22:60.12:0,60,1517	0/0:26,0:26:68.37:0,68,1807	1/1:2,17:19:30.10:597,30,0	1/1:3,21:24:57.20:1178,57,0	1/1:12,31:43:75.26:1571,75,0	0/0:27,0:27:78.26:0,78,2201	0/1:3,22:25:38.84:1014,0,39	0/0:36,0:36:99:0,102,3163	0/0:9,0:9:24.08:0,24,743	1/1:3,25:28:63.22:1291,63,0	0/0:30,0:30:84.29:0,84,2547	0/0:31,0:31:90.28:0,90,2511	0/0:31,0:31:90.31:0,90,2745	0/0:29,1:30:21.43:0,21,2382	0/0:33,0:33:96.30:0,96,2807	0/0:12,0:11:33.11:0,33,1023	1/1:1,15:16:42.14:876,42,0	1/1:0,10:10:18.06:362,18,0	1/1:3,23:26:39.61:782,40,0	0/0:14,0:14:42.14:0,42,1277	0/0:20,0:19:51.18:0,51,1575	0/0:31,0:31:84.27:0,84,2511	0/0:33,0:33:90.31:0,90,2787	0/0:26,0:26:72.25:0,72,2221	0/0:29,0:29:87.13:0,87,2570	0/0:23,0:23:69.24:0,69,2139
chr10	28568922	.	C	CTG	1035.21	PASS	AB=0.923;AC=13;AF=0.232;AN=56;BaseQRankSum=1.672;DP=665;FS=23.553;HRun=0;HaplotypeScore=159.4235;InbreedingCoeff=0.5397;MQ=56.37;MQ0=7;MQRankSum=-1.361;QD=4.81;ReadPosRankSum=-2.350;VQSLOD=0.9296;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:30,3:33:3.78:157,4,0	0/0:8,0:8:8.85:0,9,86	0/0:22,0:16:11.77:0,12,328	0/1:25,0:19:1:1,0,223	0/0:18,1:19:0.46:0,0,1	0/1:16,1:17:10.62:57,0,11	1/1:15,4:19:21:263,21,0	0/0:31,0:30:61.23:0,61,625	0/1:16,4:20:2.10:132,0,2	0/0:22,0:21:46.63:0,47,429	0/0:20,0:20:2.92:0,3,17	1/1:12,6:17:22.23:260,22,0	0/0:30,0:29:27.04:0,27,263	0/0:31,0:31:30.06:0,30,329	0/0:32,0:32:35.98:0,36,348	0/0:21,0:21:33.07:0,33,342	0/0:30,0:30:33.05:0,33,423	0/0:22,0:22:32.97:0,33,391	0/1:20,0:21:85.10:215,0,85	0/1:20,0:21:0.01:0,0,0	1/1:38,0:38:10.99:108,11,0	0/0:25,0:26:23.86:0,24,341	0/0:12,0:12:5.91:0,6,63	0/0:37,0:37:82.22:0,82,847	0/0:17,0:16:14.93:0,15,153	0/0:29,0:29:57.11:0,57,617	0/0:26,0:26:24.04:0,24,237	0/0:15,0:15:32.67:0,33,307
chr10	28568924	.	GTC	G	4808.42	PASS	AB=0.977;AC=40;AF=0.714;AN=56;BaseQRankSum=-0.682;DP=655;FS=2.289;HRun=0;HaplotypeScore=138.0243;InbreedingCoeff=0.2671;MQ=56.07;MQ0=7;MQRankSum=3.094;QD=8.62;ReadPosRankSum=3.615;VQSLOD=4.3651;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:32,1:33:10.26:182,0,10	0/1:9,0:9:29.47:40,0,29	0/0:19,0:13:12.30:0,12,159	0/0:26,0:17:22.41:0,22,192	1/1:17,0:17:5.99:47,6,0	0/1:16,1:17:4.24:79,0,4	1/1:21,0:21:21.68:221,22,0	1/1:31,0:30:37.61:479,38,0	1/1:19,0:19:2.12:218,2,0	1/1:24,0:23:2.39:237,2,0	1/1:21,0:21:2.97:20,3,0	1/1:18,0:17:1.93:117,2,0	0/1:28,1:28:26.39:173,0,26	0/1:31,0:31:2.49:174,0,2	1/1:29,1:30:32.98:296,33,0	0/1:22,0:22:3.37:218,0,3	0/0:30,0:30:19.93:0,20,220	0/0:22,0:22:33.22:0,33,208	0/1:24,0:21:74.54:128,0,75	1/1:19,0:19:20.63:153,21,0	1/1:39,0:38:28.16:215,28,0	1/1:25,0:25:32.58:264,33,0	1/1:12,0:12:5.99:51,6,0	1/1:34,0:34:52.81:593,53,0	1/1:16,0:15:14.80:111,15,0	1/1:26,0:26:35.11:416,35,0	1/1:26,0:26:20.94:176,21,0	0/1:14,1:15:0.38:199,0,0
chr10	28568926	.	CTCTG	C	7940.57	PASS	AB=0.906;AC=40;AF=0.714;AN=56;BaseQRankSum=-4.235;DP=656;FS=0.000;HRun=0;HaplotypeScore=140.4375;InbreedingCoeff=0.0642;MQ=56.11;MQ0=10;MQRankSum=2.451;QD=13.69;ReadPosRankSum=2.879;VQSLOD=4.5809;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:33:71.01:104,0,71	0/1:1,8:9:9.76:108,0,10	0/0:17,0:12:12.01:0,12,159	0/0:28,0:18:20.82:0,21,190	1/1:16,0:16:5.99:47,6,0	0/1:17,0:17:27.86:94,0,28	0/1:21,0:21:37.57:192,0,38	1/1:5,26:29:4.92:622,5,0	0/1:18,0:18:39.12:180,0,39	1/1:6,19:24:31.12:531,31,0	1/1:4,17:21:2.97:20,3,0	0/1:19,0:18:56.89:105,0,57	0/1:3,25:28:17.74:446,0,18	1/1:3,25:30:17.08:442,17,0	1/1:2,27:30:28.03:592,28,0	1/1:2,19:21:16.46:556,16,0	0/0:31,0:31:27.53:0,28,229	0/1:25,0:25:31.16:31,0,135	0/1:24,0:21:78.87:79,0,206	1/1:19,0:19:20.85:153,21,0	0/1:40,0:38:18.17:115,0,18	1/1:23,1:24:32.86:387,33,0	1/1:1,12:13:5.91:119,6,0	1/1:24,11:35:73.17:1368,73,0	1/1:13,3:15:17.97:263,18,0	1/1:24,1:25:54.64:659,55,0	1/1:1,25:26:21.07:416,21,0	1/1:13,0:13:12.26:310,12,0
chr10	28568928	.	CTGTGTGTG	C	204.59	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=0.337;DP=650;FS=1.526;HRun=0;HaplotypeScore=196.1857;InbreedingCoeff=0.6080;MQ=53.35;MQ0=10;MQRankSum=-3.157;QD=3.59;ReadPosRankSum=-0.772;VQSLOD=2.6967;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:29.49:0,29,721	0/0:9,0:9:9.02:0,9,115	0/0:16,0:11:3.01:0,3,57	0/0:25,0:16:10.58:0,11,146	0/0:16,0:16:0:0,0,0	0/0:16,0:16:7.69:0,8,191	0/0:21,0:21:36.58:0,37,737	0/0:31,0:29:29.84:0,30,368	0/0:19,0:19:19:0,19,414	0/0:22,0:21:44.96:0,45,526	0/0:18,0:19:0:0,0,0	0/0:19,0:18:30.09:0,30,678	0/0:29,0:28:30.08:0,30,395	0/0:30,0:30:24.54:0,25,296	0/0:29,0:29:32.65:0,33,393	0/0:21,0:21:28.83:0,29,358	1/1:14,18:32:3.01:72,3,0	1/1:10,14:25:13.29:235,13,0	0/0:25,0:22:45.60:0,46,1101	0/0:18,0:18:2.57:0,3,25	0/0:41,0:39:27.97:0,28,487	0/0:25,0:25:13.51:0,14,176	0/0:12,0:12:6.02:0,6,75	0/0:36,0:36:70.82:0,71,905	0/0:16,0:15:14.71:0,15,168	0/0:26,0:26:36.02:0,36,387	0/0:25,0:25:21.03:0,21,249	0/0:14,0:14:30:0,30,372
chr10	28568998	.	GTC	G	3057.04	PASS	AB=0.626;AC=16;AF=0.286;AN=56;BaseQRankSum=9.331;DP=774;FS=17.809;HRun=0;HaplotypeScore=175.1512;InbreedingCoeff=0.8398;MQ=57.68;MQ0=18;MQRankSum=1.614;QD=13.47;ReadPosRankSum=3.253;VQSLOD=2.1543;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,16:27:12.26:289,12,0	0/0:16,0:16:20.91:0,21,377	0/0:37,0:20:37.88:0,38,509	0/0:64,1:25:48.51:0,49,632	1/1:3,15:18:11.63:139,12,0	0/1:2,12:14:0.38:196,0,0	1/1:5,25:32:29.94:420,30,0	0/0:34,0:34:99:0,99,1580	1/1:2,15:17:7.83:443,8,0	0/0:34,0:33:93.03:0,93,1509	0/0:20,0:19:11.64:0,12,200	1/1:3,18:20:41.87:574,42,0	0/0:21,0:20:45.15:0,45,790	0/0:25,0:25:54.17:0,54,957	0/0:27,0:27:45.11:0,45,803	0/0:24,0:24:54.17:0,54,958	0/0:34,0:34:41.43:0,41,733	0/0:32,0:32:60.11:0,60,1012	1/1:13,9:19:15.66:422,16,0	0/1:12,7:20:12.74:83,0,13	1/1:7,47:54:48.05:685,48,0	0/0:28,0:28:32.71:0,33,573	0/0:15,0:15:18.06:0,18,320	0/0:47,0:46:87.13:0,87,1396	0/0:27,0:27:23.91:0,24,403	0/0:26,0:26:78.17:0,78,1357	0/0:19,0:17:39.10:0,39,713	0/0:16,0:16:39.11:0,39,660
chr10	28569071	.	T	TTCTC	8879.01	PASS	AB=1.000;AC=43;AF=0.860;AN=50;BaseQRankSum=-4.014;DP=587;FS=11.157;HRun=0;HaplotypeScore=169.9611;InbreedingCoeff=0.6589;MQ=53.82;MQ0=17;MQRankSum=0.986;QD=22.03;ReadPosRankSum=5.084;VQSLOD=3.6044;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:3,0:3:0:0,0,0	1/1:5,5:11:22.89:410,23,0	0/0:71,0:31:41.14:0,41,502	0/0:98,0:33:25.56:0,26,366	0/1:7,0:7:0.09:0,0,0	./.	1/1:6,0:5:0.47:1,0,0	1/1:21,4:24:33.65:437,34,0	./.	1/1:23,6:29:43.03:647,43,0	1/1:10,3:13:6.91:170,7,0	./.	1/1:10,8:20:31.48:642,31,0	1/1:12,11:21:29.11:690,29,0	1/1:9,10:19:30.48:661,30,0	1/1:10,8:18:27.08:585,27,0	1/1:29,0:30:36:709,36,0	1/1:21,0:20:34.19:437,34,0	1/1:4,0:4:3.87:25,4,0	1/1:5,0:5:0.47:1,0,0	1/1:11,0:10:0.39:1,0,0	1/1:13,8:22:6.93:157,7,0	1/1:10,9:18:3.60:79,4,0	1/1:19,18:37:41.88:815,42,0	1/1:18,6:21:23.21:395,23,0	1/1:15,8:22:36.09:789,36,0	1/1:5,8:14:28.47:653,28,0	1/1:11,5:16:30.06:575,30,0
chr10	28569087	.	C	CTCTG	6720.45	PASS	AB=1.000;AC=31;AF=0.596;AN=52;BaseQRankSum=-3.880;DP=555;FS=0.521;HRun=0;HaplotypeScore=194.1437;InbreedingCoeff=-0.1586;MQ=49.24;MQ0=17;MQRankSum=-1.295;QD=16.97;ReadPosRankSum=6.066;VQSLOD=4.3902;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,0:7:5.95:45,6,0	1/1:10,0:10:10.21:322,10,0	0/0:60,0:22:41.63:0,42,561	0/0:81,0:31:33.75:0,34,511	0/0:6,0:7:2.94:0,3,18	0/0:2,0:2:0:0,0,0	./.	0/1:22,0:20:81.61:207,0,82	1/1:4,0:4:8.96:69,9,0	1/1:22,0:23:30.13:520,30,0	0/1:12,0:12:14.43:95,0,14	./.	1/1:20,0:20:12.89:403,13,0	0/1:24,0:23:54.07:434,0,54	0/1:23,0:23:12.36:437,0,12	0/1:19,0:19:76.69:354,0,77	1/1:13,12:26:46.79:959,47,0	1/1:12,5:16:38.83:542,39,0	0/1:6,0:6:5.60:73,0,6	1/1:7,0:7:4.46:44,4,0	1/1:6,0:8:2.98:25,3,0	0/1:20,0:20:13.53:78,0,14	0/1:19,0:17:16:76,0,16	0/1:40,0:39:56.19:475,0,56	0/1:26,0:23:58.38:265,0,58	0/1:26,0:25:33.85:536,0,34	0/1:17,0:18:41.48:434,0,41	0/1:14,0:14:37.33:326,0,37
chr10	28569107	.	CTCTG	C	7234.78	PASS	AB=0.821;AC=34;AF=0.607;AN=56;BaseQRankSum=-0.319;DP=508;FS=0.000;HRun=0;HaplotypeScore=157.1982;InbreedingCoeff=0.5071;MQ=47.86;MQ0=39;MQRankSum=-0.723;QD=16.59;ReadPosRankSum=2.387;VQSLOD=4.5038;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:11.49:0,11,283	1/1:7,3:9:9.40:144,9,0	0/1:38,0:12:9.72:10,0,192	0/1:75,0:23:24.88:25,0,150	0/0:9,0:8:5.86:0,6,58	0/1:5,0:4:0.01:0,0,0	0/0:9,0:7:18.06:0,18,436	0/1:3,21:22:13.01:798,0,13	0/0:4,0:4:9.03:0,9,223	1/1:14,5:17:21.86:324,22,0	1/1:4,6:9:12.04:201,12,0	0/0:8,0:6:5.30:0,5,150	1/1:4,14:18:24.07:373,24,0	1/1:5,17:22:24.05:390,24,0	0/1:6,13:19:55.06:292,0,55	1/1:1,16:16:36.12:625,36,0	1/1:11,7:18:27.06:425,27,0	0/1:12,4:15:35.49:359,0,35	0/0:10,0:7:12.01:0,12,210	0/0:7,0:5:6.02:0,6,152	0/0:13,0:12:14.80:0,15,282	1/1:7,8:15:12.04:181,12,0	1/1:8,1:9:6.49:100,6,0	1/1:13,25:38:36.11:626,36,0	1/1:12,12:22:38.89:569,39,0	1/1:8,16:24:46.93:719,47,0	1/1:4,19:23:45.08:711,45,0	1/1:3,8:11:21.07:363,21,0
chr10	28569176	.	C	CTGTGTGTG	521.38	PASS	AB=1.000;AC=12;AF=0.214;AN=56;BaseQRankSum=6.280;DP=680;FS=36.701;HRun=0;HaplotypeScore=246.8594;InbreedingCoeff=0.0463;MQ=50.69;MQ0=26;MQRankSum=-2.627;QD=3.52;ReadPosRankSum=-4.712;VQSLOD=0.1330;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:12,4:16:6.49:0,6,101	0/1:10,0:10:24.24:24,0,288	0/0:44,0:16:27.57:0,28,452	0/0:81,0:24:29.60:0,30,527	0/0:18,0:16:2.69:0,3,51	0/1:14,0:13:7.09:49,0,7	0/0:9,0:8:5.91:0,6,38	0/0:25,0:19:20.59:0,21,484	0/1:5,0:4:15.99:58,0,16	0/1:30,0:29:18.16:18,0,1308	0/0:23,0:23:8.65:0,9,479	1/1:18,0:15:8.01:120,8,0	0/0:20,0:20:41.69:0,42,642	0/0:22,0:21:29.93:0,30,464	0/0:31,0:31:30.93:0,31,817	0/0:23,0:23:51.56:0,52,977	0/0:31,0:30:27.12:0,27,847	0/0:31,0:31:74.74:0,75,1525	0/1:7,0:6:33.62:34,0,116	0/1:12,0:12:15.48:148,0,15	1/1:13,0:12:4.44:69,4,0	0/0:33,0:30:5.41:0,5,1072	0/0:15,0:14:27.56:0,28,560	0/0:53,0:53:68.91:0,69,1296	0/1:19,0:19:33.32:33,0,652	0/0:29,0:29:42.02:0,42,1267	0/0:27,0:27:1.61:0,2,1073	0/1:20,0:20:99:118,0,998
chr10	28569178	.	C	CTGTGTGTGTG	1234.61	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=4.224;DP=691;FS=49.077;HRun=0;HaplotypeScore=273.3648;InbreedingCoeff=0.1516;MQ=51.28;MQ0=23;MQRankSum=-4.858;QD=4.80;ReadPosRankSum=-4.431;VQSLOD=0.6617;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,1:16:5.82:0,6,50	0/1:13,0:13:72.98:73,0,305	0/0:45,0:17:24.68:0,25,472	0/0:79,0:25:31.83:0,32,696	0/0:21,0:19:3.54:0,4,25	1/1:15,0:14:5.42:114,5,0	0/0:6,3:9:8.02:0,8,61	0/1:25,0:20:32.90:33,0,681	1/1:5,0:4:6.02:161,6,0	0/1:30,0:29:98.16:98,0,1512	0/0:25,0:25:2.07:0,2,738	1/1:10,8:15:9.15:217,9,0	0/0:21,0:21:42.54:0,43,849	0/1:23,0:22:4.54:5,0,638	0/0:31,0:31:57.13:0,57,1100	0/0:23,0:23:54.13:0,54,1153	0/1:31,0:30:5.43:5,0,1009	0/0:32,0:32:78.40:0,78,1766	0/1:6,0:6:36.20:80,0,36	1/1:14,0:14:6.96:193,7,0	1/1:13,0:12:5.34:145,5,0	0/0:33,0:30:9.65:0,10,1243	0/0:15,0:14:30.09:0,30,659	0/0:53,0:53:68.90:0,69,1602	0/1:18,0:18:28.62:29,0,774	0/0:30,0:30:47.69:0,48,1499	0/1:27,0:27:78.12:78,0,1233	0/1:19,0:19:99:172,0,1049
chr10	28569181	.	TGTGC	T	147.03	PASS	AB=0.886;AC=6;AF=0.107;AN=56;BaseQRankSum=4.254;DP=680;FS=11.166;HRun=0;HaplotypeScore=223.5759;InbreedingCoeff=-0.1213;MQ=55.77;MQ0=23;MQRankSum=-1.831;QD=1.05;ReadPosRankSum=-4.901;VQSLOD=0.3790;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:11,1:12:2.20:0,2,23	0/0:13,0:13:5.93:0,6,463	0/0:43,0:19:26.36:0,26,552	0/1:84,0:33:4.07:4,0,593	0/1:19,1:18:15.29:20,0,15	0/1:9,5:13:46.35:46,0,53	0/1:11,1:11:76.31:76,0,84	0/0:22,0:18:48.14:0,48,1131	0/1:4,0:3:13.94:53,0,14	0/0:32,0:31:82.54:0,83,1929	0/0:25,0:25:40.41:0,40,884	0/0:14,3:15:5.82:0,6,131	0/0:22,0:22:42.90:0,43,816	0/0:23,0:22:29.72:0,30,782	0/0:30,0:30:56.89:0,57,1303	0/0:21,0:21:51.04:0,51,1261	0/0:31,0:30:63.10:0,63,1255	0/0:32,0:32:79.25:0,79,1918	0/1:3,2:5:65.32:66,0,65	0/0:12,1:13:8.68:0,9,153	0/0:8,3:10:2.37:0,2,64	0/0:34,0:31:53.31:0,53,1467	0/0:15,0:13:26.96:0,27,695	0/0:52,0:52:68.60:0,69,1819	0/0:17,0:17:35.10:0,35,891	0/0:29,0:29:77.19:0,77,1880	0/0:27,0:27:60.31:0,60,1418	0/0:19,0:19:54.18:0,54,1335
chr10	28569202	.	G	GTC	89.98	PASS	AB=0.929;AC=6;AF=0.107;AN=56;BaseQRankSum=7.676;DP=726;FS=50.904;HRun=0;HaplotypeScore=208.3891;InbreedingCoeff=-0.1241;MQ=57.98;MQ0=26;MQRankSum=-2.978;QD=0.54;ReadPosRankSum=-3.218;VQSLOD=0.6993;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:5.78:0,6,85	0/1:12,1:14:46.19:46,0,236	0/0:56,0:30:24.33:0,24,520	0/0:108,0:45:13.86:0,14,696	0/0:21,0:19:2.20:0,2,42	0/0:12,0:12:11.08:0,11,135	0/0:21,0:20:14.74:0,15,204	0/0:22,0:19:54.12:0,54,730	0/0:2,0:2:5.99:0,6,65	0/1:37,0:37:4.26:4,0,1035	0/0:29,0:29:20.58:0,21,294	0/0:13,0:12:5.84:0,6,85	0/0:17,0:17:33.08:0,33,424	0/0:17,0:16:13.43:0,13,175	0/0:19,2:21:36.01:0,36,514	0/0:22,0:22:38.80:0,39,558	0/1:17,10:26:99:129,0,325	0/1:28,3:31:0.82:1,0,812	0/0:12,0:8:12.37:0,12,210	0/0:17,0:17:14.80:0,15,191	0/0:13,0:12:8.89:0,9,129	0/0:33,0:30:48.07:0,48,665	0/0:19,0:19:23.74:0,24,343	0/0:39,3:41:44.79:0,45,644	0/0:22,0:24:30.10:0,30,423	0/1:32,0:33:2.73:3,0,916	0/1:22,0:23:6.04:6,0,554	0/0:20,0:20:12.23:0,12,722
chr10	28570733	.	A	ACG	13234.45	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-12.197;DP=747;FS=2.014;HRun=0;HaplotypeScore=105.0279;InbreedingCoeff=0.9945;MQ=86.32;MQ0=0;MQRankSum=-1.554;QD=50.13;ReadPosRankSum=1.285;VQSLOD=5.7181;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,31:37:95.14:1772,95,0	0/0:4,0:4:12.04:0,12,183	0/0:29,0:29:84.23:0,84,1184	0/0:32,0:32:90.27:0,90,1296	1/1:1,20:21:57.20:1091,57,0	1/1:0,25:25:66.23:1268,66,0	1/1:1,23:24:60.21:1134,60,0	0/0:41,0:41:99:0,120,1723	1/1:3,28:31:87.20:1588,87,0	0/0:34,0:34:99:0,99,1457	0/0:11,0:11:21.06:0,21,291	1/1:1,29:30:78.27:1497,78,0	0/0:35,0:35:96.32:0,96,1450	0/0:13,0:13:36.11:0,36,527	0/0:32,0:32:87.30:0,87,1327	0/0:35,0:35:99:0,99,1464	0/0:29,0:29:87.26:0,87,1270	0/0:25,0:25:69.22:0,69,1024	1/1:0,19:20:60.19:1112,60,0	1/1:3,11:13:39.13:714,39,0	1/1:0,61:62:99:3059,160,0	0/0:17,0:17:45.15:0,45,676	0/0:19,0:19:51.17:0,51,779	0/0:35,0:35:87.23:0,87,1287	0/0:16,0:16:45.15:0,45,687	0/0:29,0:29:87.27:0,87,1290	0/0:32,0:32:90.29:0,90,1345	0/0:15,0:15:45.15:0,45,687
chr10	28571919	.	T	TC	8885.66	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=18.735;DP=721;FS=0.296;HRun=2;HaplotypeScore=144.2176;InbreedingCoeff=1.0000;MQ=69.03;MQ0=0;MQRankSum=-16.786;QD=35.83;ReadPosRankSum=-1.896;VQSLOD=3.9852;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,31:39:99:1248,99,0	0/0:15,0:15:45.13:0,45,544	0/0:25,0:25:66.21:0,66,815	0/0:24,0:25:66.04:0,66,753	1/1:3,23:26:48.15:662,48,0	1/1:2,18:20:60.19:834,60,0	1/1:4,33:37:99:1504,108,0	0/0:28,0:28:81.25:0,81,1004	1/1:4,22:27:75.25:1067,75,0	0/0:26,0:26:78.24:0,78,957	0/0:29,0:29:84.26:0,84,1041	1/1:5,29:34:90.30:1285,90,0	0/0:21,0:21:60.19:0,60,744	0/0:26,0:26:78.23:0,78,953	0/0:24,0:24:69.22:0,69,853	0/0:18,0:18:54.17:0,54,669	0/0:33,0:33:93.27:0,93,1138	0/0:18,0:18:54.17:0,54,669	1/1:2,15:17:51.17:725,51,0	1/1:2,21:23:66.15:913,66,0	1/1:5,20:25:50.91:647,51,0	0/0:32,0:32:93.29:0,93,1152	0/0:24,0:24:72.21:0,72,880	0/0:32,0:32:93.29:0,93,1152	0/0:28,0:28:84.26:0,84,1041	0/0:33,0:33:93.28:0,93,1131	0/0:19,0:18:57.18:0,57,706	0/0:17,0:17:42.13:0,42,521
chr10	28571933	.	A	AC	8064.61	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=16.382;DP=733;FS=0.000;HRun=4;HaplotypeScore=148.7989;InbreedingCoeff=1.0000;MQ=79.62;MQ0=0;MQRankSum=-16.431;QD=31.26;ReadPosRankSum=-2.221;VQSLOD=2.6850;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,36:40:96.17:1244,96,0	0/0:14,0:14:36.10:0,36,408	0/0:32,0:33:65:0,65,828	0/0:23,0:23:57.13:0,57,622	1/1:2,24:26:41.98:511,42,0	1/1:2,20:22:60.15:796,60,0	1/1:7,35:42:99:1306,99,0	0/0:29,0:29:81.23:0,81,919	1/1:1,22:23:66.21:884,66,0	0/0:23,0:23:69.19:0,69,773	0/0:25,0:25:75.20:0,75,840	1/1:1,34:35:96.32:1305,96,0	0/0:23,0:23:63.16:0,63,704	0/0:29,0:29:81.22:0,81,909	0/0:23,0:23:69.17:0,69,758	0/0:16,0:16:45.12:0,45,504	0/0:32,0:32:90.26:0,90,1021	0/0:20,0:20:51.10:0,51,556	1/1:6,14:20:45.12:582,45,0	1/1:3,19:22:59.79:746,60,0	1/1:5,23:28:54.15:690,54,0	0/0:35,0:35:99:0,99,1115	0/0:25,0:25:75.21:0,75,849	0/0:33,0:33:99:0,99,1123	0/0:24,0:24:63.18:0,63,715	0/0:33,0:33:93.21:0,93,1026	0/0:19,0:18:57.09:0,57,610	0/0:16,0:16:45.04:0,45,464
chr10	28572457	.	C	CGT	9518.96	PASS	AB=0.589;AC=17;AF=0.304;AN=56;BaseQRankSum=4.142;DP=819;FS=2.707;HRun=0;HaplotypeScore=176.3131;InbreedingCoeff=0.5566;MQ=62.57;MQ0=0;MQRankSum=0.455;QD=27.51;ReadPosRankSum=4.743;VQSLOD=6.0556;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:17,38:55:99:1805,111,0	0/0:9,0:9:24.06:0,24,282	0/0:37,0:35:71.87:0,72,879	0/0:45,0:39:71.85:0,72,831	1/1:5,14:20:36.12:592,36,0	1/1:6,14:20:1.75:557,2,0	0/1:7,12:19:10.30:369,0,10	0/0:33,0:33:72.10:0,72,834	0/1:9,26:35:7.11:915,0,7	0/0:33,0:33:78.24:0,78,948	0/0:28,0:28:46.87:0,47,654	0/1:9,28:37:11.58:878,0,12	0/0:30,0:30:46.32:0,46,620	0/0:24,0:24:48.13:0,48,576	0/0:37,0:37:69.19:0,69,822	0/0:32,0:32:78.23:0,78,948	1/1:8,20:29:51.17:841,51,0	0/1:5,19:24:26.06:645,0,26	1/1:9,15:24:48.12:736,48,0	1/1:5,17:22:8.48:656,8,0	0/1:25,36:61:34.02:1526,0,34	0/0:14,0:14:38.82:0,39,435	0/0:14,0:14:36.11:0,36,445	0/0:37,0:37:69.19:0,69,849	0/0:18,0:19:44.97:0,45,530	0/0:36,0:36:93.24:0,93,1112	0/0:31,0:31:81.25:0,81,990	0/0:14,0:14:30.09:0,30,368
chr10	28572550	.	GTCTGTGTATGTATGTGTC	G	8247.98	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-4.962;DP=664;FS=7.425;HRun=0;HaplotypeScore=385.0697;InbreedingCoeff=0.9289;MQ=57.26;MQ0=2;MQRankSum=-5.983;QD=36.50;ReadPosRankSum=2.456;VQSLOD=2.3696;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:80.68:0,81,3982	1/1:7,2:9:9.02:211,9,0	0/0:40,0:28:63.78:0,64,2222	0/0:48,0:42:99:0,102,3828	0/0:25,0:25:43.21:0,43,1608	0/0:27,0:27:63.22:0,63,3450	0/0:22,0:22:30.51:0,31,767	1/1:25,0:25:54.14:955,54,0	0/0:22,0:22:51.07:0,51,3084	1/1:18,5:23:60.21:1603,60,0	1/1:13,3:16:14.98:399,15,0	0/0:34,0:34:62.67:0,63,2729	1/1:12,3:15:12.04:327,12,0	1/1:19,2:21:26.95:652,27,0	1/1:18,6:24:33.10:1038,33,0	1/1:11,2:14:7.67:356,8,0	0/0:31,0:31:56.15:0,56,2475	0/0:25,0:25:66.21:0,66,3730	0/0:29,0:29:69.18:0,69,2922	0/0:22,0:22:41.47:0,41,2129	0/0:56,0:55:77.78:0,78,4045	1/1:10,1:11:12.03:277,12,0	1/1:16,1:17:15:268,15,0	0/0:9,2:11:0:0,0,0	1/1:5,4:9:5.94:126,6,0	1/1:20,4:24:51.16:1348,51,0	1/1:10,0:10:21.04:322,21,0	1/1:7,1:8:21.04:365,21,0
chr10	28572602	.	A	ATGTG	18396.65	PASS	AB=0.590;AC=50;AF=0.893;AN=56;BaseQRankSum=0.549;DP=612;FS=5.846;HRun=0;HaplotypeScore=257.3814;InbreedingCoeff=0.7099;MQ=59.90;MQ0=2;MQRankSum=-6.807;QD=33.51;ReadPosRankSum=5.754;VQSLOD=4.2548;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,32:40:56.76:1429,57,0	1/1:2,7:9:15.05:380,15,0	0/0:32,0:26:53.91:0,54,923	0/0:31,0:28:32.08:0,32,731	1/1:3,20:23:24:634,24,0	1/1:6,16:21:19.43:701,19,0	1/1:4,16:20:12.02:317,12,0	1/1:9,16:26:60.18:1442,60,0	1/1:5,24:29:47.97:1257,48,0	1/1:2,19:21:57.19:1405,57,0	1/1:6,13:19:11.75:298,12,0	1/1:2,21:23:24.07:617,24,0	1/1:4,19:23:51.17:1151,51,0	1/1:4,11:15:21.05:533,21,0	1/1:5,20:25:21.90:516,22,0	1/1:3,15:18:14.71:381,15,0	1/1:5,24:29:42.09:1101,42,0	1/1:5,15:20:45.15:1186,45,0	1/1:6,11:19:42.13:864,42,0	1/1:10,12:22:14.34:394,14,0	1/1:18,22:40:50.66:1181,51,0	1/1:2,10:12:5.99:141,6,0	0/1:4,9:13:0.09:0,0,0	0/1:6,14:20:1.28:73,0,1	1/1:7,9:16:8.64:237,9,0	1/1:6,17:23:68.59:1518,69,0	1/1:3,13:16:18.03:467,18,0	1/1:2,2:4:8.90:173,9,0
chr10	28572632	.	TTGTGTG	T	6380.28	PASS	AB=0.944;AC=33;AF=0.611;AN=54;BaseQRankSum=-0.866;DP=594;FS=6.299;HRun=0;HaplotypeScore=277.2627;InbreedingCoeff=0.7897;MQ=47.38;MQ0=18;MQRankSum=-3.889;QD=20.45;ReadPosRankSum=3.156;VQSLOD=3.4927;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:39:19.45:0,19,413	1/1:6,7:13:24.02:394,24,0	./.	0/0:24,0:15:3.01:0,3,40	0/0:22,0:21:5.96:0,6,115	0/0:20,0:21:14.86:0,15,144	0/0:23,0:20:2.62:0,3,67	0/1:32,2:32:13.60:289,0,14	0/0:26,0:27:17.94:0,18,254	1/1:15,3:18:12.04:245,12,0	1/1:7,10:17:23.92:343,24,0	0/0:25,0:27:18.05:0,18,377	1/1:9,14:25:50.96:921,51,0	1/1:9,9:18:16.20:387,16,0	1/1:15,6:22:21.05:357,21,0	1/1:10,7:18:27.08:508,27,0	1/1:14,0:21:14.55:174,15,0	1/1:15,0:16:3.01:42,3,0	0/0:18,0:17:22.27:0,22,320	0/0:18,0:23:24.36:0,24,408	0/0:29,0:30:11.59:0,12,168	1/1:6,13:22:24.02:402,24,0	1/1:5,7:12:18.02:289,18,0	1/1:8,5:15:12.35:188,12,0	1/1:7,7:14:15.74:249,16,0	1/1:14,5:20:35.91:591,36,0	1/1:8,14:23:45.13:867,45,0	1/1:3,0:3:8.82:135,9,0
chr10	28572648	.	G	GA	160.82	PASS	AB=0.708;AC=2;AF=0.036;AN=56;BaseQRankSum=-0.501;DP=576;FS=0.000;HRun=0;HaplotypeScore=221.4050;InbreedingCoeff=0.0737;MQ=42.09;MQ0=24;MQRankSum=-3.337;QD=8.04;ReadPosRankSum=0.750;VQSLOD=2.9601;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:41.88:0,42,574	0/0:13,0:13:29.51:0,30,266	0/0:22,0:8:24.08:0,24,329	0/0:20,0:7:18.06:0,18,246	0/0:22,0:21:30.07:0,30,395	0/0:29,0:25:48.04:0,48,595	0/0:20,0:17:9.02:0,9,122	0/0:34,0:32:89.93:0,90,1143	0/0:24,0:24:39.12:0,39,520	0/0:16,0:16:47.62:0,48,547	0/0:21,0:21:47.89:0,48,546	0/0:22,0:21:23.87:0,24,259	0/0:26,0:26:63.99:0,64,477	0/0:18,0:17:41.57:0,42,381	0/0:24,0:24:38.75:0,39,391	0/0:16,0:16:31.99:0,32,225	0/1:9,3:12:41.68:77,0,42	0/1:3,5:8:8:173,0,8	0/0:16,0:14:36.12:0,36,496	0/0:24,0:23:39.04:0,39,512	0/0:27,0:27:24.02:0,24,314	0/0:26,0:26:45.18:0,45,456	0/0:14,0:14:23.75:0,24,226	0/0:16,0:15:20.90:0,21,209	0/0:17,0:17:32.93:0,33,372	0/0:29,0:29:79.97:0,80,890	0/0:21,0:21:46.06:0,46,277	0/0:3,0:3:8.73:0,9,70
chr10	28572934	.	CAGAGAAAGAG	C	3068.03	PASS	AB=1.000;AC=37;AF=0.661;AN=56;BaseQRankSum=-0.646;DP=485;FS=14.696;HRun=0;HaplotypeScore=127.1183;InbreedingCoeff=0.4868;MQ=48.69;MQ0=17;MQRankSum=2.968;QD=9.93;ReadPosRankSum=4.647;VQSLOD=1.3118;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:71.55:0,72,543	1/1:7,0:7:11.84:80,12,0	0/0:26,0:5:0.36:0,0,31	0/0:41,0:13:10.66:0,11,138	0/0:7,0:7:17.93:0,18,147	0/1:24,0:23:71.21:71,0,286	0/0:20,0:17:35.21:0,35,269	1/1:16,0:14:29.90:239,30,0	0/1:17,0:17:20.90:21,0,197	1/1:13,0:12:30.01:277,30,0	1/1:11,0:10:11.64:99,12,0	0/0:15,0:15:35.87:0,36,292	1/1:0,12:12:6.49:194,6,0	1/1:14,0:13:26.96:222,27,0	1/1:18,0:19:41.85:385,42,0	1/1:15,0:15:29.45:285,29,0	1/1:17,0:16:37.52:293,38,0	0/1:11,0:11:8.91:75,0,9	0/1:25,0:21:53.84:54,0,292	0/1:16,0:15:12:12,0,250	0/0:23,0:20:34.61:0,35,253	1/1:17,0:15:17.85:150,18,0	1/1:6,0:6:14.89:113,15,0	1/1:1,20:22:3.01:96,3,0	1/1:10,0:10:11.80:97,12,0	1/1:11,0:11:26.87:218,27,0	1/1:0,17:17:2.37:94,2,0	1/1:9,0:8:23.87:186,24,0
chr10	28572938	.	GAA	G	2637.06	PASS	AB=1.000;AC=35;AF=0.625;AN=56;BaseQRankSum=-2.841;DP=472;FS=17.994;HRun=3;HaplotypeScore=82.9409;InbreedingCoeff=0.8642;MQ=48.34;MQ0=20;MQRankSum=3.109;QD=10.72;ReadPosRankSum=4.296;VQSLOD=-0.6821;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:71.55:0,72,543	1/1:7,0:7:11.84:80,12,0	0/1:25,0:5:1.62:2,0,30	0/0:41,0:13:9.88:0,10,137	0/0:7,0:7:17.93:0,18,147	0/0:24,0:23:48.66:0,49,368	0/0:18,0:15:35.34:0,35,270	1/1:7,8:12:29.90:239,30,0	0/0:16,0:16:28.76:0,29,232	1/1:13,0:12:30.01:277,30,0	1/1:11,0:10:11.69:100,12,0	0/0:13,0:13:35.87:0,36,292	1/1:12,0:12:6.44:45,6,0	1/1:13,0:12:26.96:222,27,0	1/1:18,0:18:41.82:329,42,0	1/1:14,0:14:34.18:272,34,0	1/1:17,0:16:41.79:326,42,0	1/1:12,0:12:20.37:153,20,0	0/0:25,0:21:43.22:0,43,349	0/0:16,0:15:37.66:0,38,294	0/0:23,0:19:34.61:0,35,253	1/1:16,0:13:17.85:150,18,0	1/1:6,0:6:14.89:113,15,0	1/1:21,0:21:2.98:22,3,0	1/1:10,0:10:11.80:97,12,0	1/1:10,0:10:26.87:218,27,0	1/1:17,0:17:2.65:21,3,0	1/1:9,0:8:23.87:186,24,0
chr10	28572940	.	AAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG	A	2571.49	PASS	AB=1.000;AC=15;AF=0.278;AN=54;BaseQRankSum=4.356;DP=471;FS=33.156;HRun=0;HaplotypeScore=242.7460;InbreedingCoeff=0.6032;MQ=47.90;MQ0=20;MQRankSum=-3.111;QD=14.78;ReadPosRankSum=0.272;VQSLOD=1.4603;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:24,20:44:3.01:57,3,0	0/0:7,0:7:6.49:0,6,166	0/0:24,0:4:1.25:0,1,3	0/0:37,0:11:2.80:0,3,6	./.	1/1:13,11:23:18.06:1048,18,0	0/1:18,0:15:99:124,0,230	0/0:14,0:11:9.03:0,9,392	1/1:9,6:15:3.01:231,3,0	0/0:11,0:10:18.06:0,18,853	0/0:11,0:10:6.02:0,6,211	1/1:10,2:12:9.03:225,9,0	0/0:13,0:13:5.50:0,6,377	0/0:13,0:12:17.93:0,18,971	0/0:19,0:19:26.92:0,27,1237	0/0:13,0:13:9.55:0,10,822	0/0:19,0:18:29.97:0,30,1790	0/0:15,0:15:29.59:0,30,1826	1/1:16,8:20:23.91:644,24,0	1/1:12,1:15:6.02:348,6,0	1/1:21,0:18:6.45:61,6,0	0/0:16,0:13:12.04:0,12,447	0/0:6,0:6:9.03:0,9,233	0/0:22,0:22:3.01:0,3,189	0/0:11,0:11:6.02:0,6,198	0/0:11,0:11:27.09:0,27,1071	0/0:17,0:17:4.57:0,5,196	0/0:12,0:11:29.46:0,29,1139
chr10	28573270	.	CTG	C	597.79	PASS	AB=0.949;AC=17;AF=0.327;AN=52;BaseQRankSum=2.243;DP=772;FS=13.250;HRun=0;HaplotypeScore=118.0841;InbreedingCoeff=-0.3284;MQ=64.41;MQ0=11;MQRankSum=2.784;QD=1.41;ReadPosRankSum=1.758;VQSLOD=1.0098;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:38,1:38:3.17:3,0,270	0/1:11,1:12:16.95:17,0,140	./.	./.	0/0:24,0:24:15.60:0,16,216	0/1:22,1:23:11.27:11,0,190	0/1:22,2:24:36.79:37,0,203	0/0:23,0:23:8.99:0,9,93	0/1:22,2:23:37.58:38,0,238	0/1:29,1:29:29.66:30,0,95	0/1:22,0:22:9.22:9,0,197	0/0:28,0:27:14.45:0,14,132	0/1:25,0:25:15:15,0,222	0/1:28,2:30:25.90:26,0,313	0/0:32,0:31:36.11:0,36,514	0/1:32,8:40:92.80:93,0,388	0/0:30,0:36:17.03:0,17,425	0/0:12,0:22:18.01:0,18,167	0/1:27,0:26:13.89:14,0,92	0/0:21,0:20:2.26:0,2,191	0/0:51,0:49:14.09:0,14,379	0/1:24,0:26:60.52:61,0,67	0/0:11,0:11:6.85:0,7,124	1/1:20,17:38:33.08:356,33,0	0/1:26,3:29:8.26:8,0,246	0/1:22,0:21:13.13:13,0,146	0/0:16,0:15:2.56:0,3,201	0/1:13,0:13:18.97:19,0,96
chr10	28573314	.	G	GTA	2642.91	PASS	AB=0.957;AC=13;AF=0.232;AN=56;BaseQRankSum=4.867;DP=748;FS=15.621;HRun=0;HaplotypeScore=131.1443;InbreedingCoeff=0.1090;MQ=56.62;MQ0=13;MQRankSum=0.745;QD=8.64;ReadPosRankSum=1.906;VQSLOD=2.7334;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:38,0:35:92.67:324,0,93	0/0:15,0:15:35.63:0,36,311	0/0:33,0:23:60.01:0,60,570	0/0:27,0:17:41.84:0,42,403	0/1:22,0:22:52.21:199,0,52	1/1:25,0:25:8.83:371,9,0	1/1:32,0:32:22.20:470,22,0	0/0:45,0:43:99:0,115,960	0/1:23,0:23:81.22:196,0,81	0/0:32,0:29:82.47:0,82,754	0/0:21,0:20:47.16:0,47,464	0/1:8,13:21:24.14:202,0,24	0/0:21,0:21:50.37:0,50,514	0/0:28,0:27:74.93:0,75,782	0/0:27,0:26:49.70:0,50,739	0/0:33,0:34:77.19:0,77,797	0/1:37,0:37:40.49:40,0,505	0/1:20,0:19:76.06:85,0,76	0/1:18,0:15:6.07:221,0,6	0/1:22,0:21:40.73:139,0,41	0/1:47,0:46:42.10:559,0,42	0/0:20,0:17:44.60:0,45,386	0/0:18,0:18:38.88:0,39,393	0/0:39,0:38:71.43:0,71,554	0/0:25,0:24:36.02:0,36,392	0/0:24,0:21:56.72:0,57,523	0/0:17,0:17:30.45:0,30,394	0/0:16,0:15:16.25:0,16,284
chr10	28573593	.	A	ATT	12165.12	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-10.468;DP=620;FS=1.036;HRun=9;HaplotypeScore=70.1143;InbreedingCoeff=0.9985;MQ=71.91;MQ0=3;MQRankSum=-2.778;QD=32.44;ReadPosRankSum=1.407;VQSLOD=5.1530;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:87.11:0,87,893	1/1:1,13:14:36.08:528,36,0	0/0:17,0:17:32.94:0,33,393	0/0:17,0:15:24.85:0,25,256	0/0:23,0:23:63.10:0,63,658	0/0:22,0:22:63.16:0,63,670	0/0:21,0:21:51.08:0,51,534	1/1:8,19:28:37.42:874,37,0	0/0:34,0:34:87.17:0,87,910	1/1:2,25:26:69.21:1039,69,0	1/1:0,18:21:56.68:836,57,0	0/0:20,0:20:54.10:0,54,564	1/1:2,14:17:42.13:613,42,0	1/1:2,16:18:35.91:521,36,0	1/1:4,15:19:42.11:621,42,0	1/1:7,18:25:54.18:825,54,0	1/1:2,0:21:39.93:137,40,0	1/1:2,0:23:42.89:146,43,0	0/0:21,0:21:51.11:0,51,542	0/0:22,0:22:63.13:0,63,655	0/0:14,0:14:42.11:0,42,447	1/1:4,16:20:42.14:637,42,0	1/1:2,11:12:30.10:462,30,0	1/1:2,9:11:18.53:278,19,0	1/1:0,32:35:92.80:1394,93,0	1/1:4,27:30:78.74:1201,79,0	1/1:3,35:36:99:1546,102,0	1/1:3,11:14:32.93:508,33,0
chr10	28574247	.	T	TCCGTGAACACACG	33546.31	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-14.428;DP=663;FS=11.596;HRun=0;HaplotypeScore=272.8478;InbreedingCoeff=0.9953;MQ=77.27;MQ0=0;MQRankSum=-19.042;QD=128.04;ReadPosRankSum=-1.568;VQSLOD=3.4271;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:17,15:35:78.27:4289,78,0	0/0:8,0:8:24.08:0,24,833	0/0:32,0:31:84.28:0,84,2854	0/0:32,0:33:62.83:0,63,2190	1/1:13,18:35:78.27:3755,78,0	1/1:11,16:30:81.28:4161,81,0	1/1:12,8:21:57.20:3144,57,0	0/0:23,0:23:69.21:0,69,2469	1/1:8,6:18:36.12:2085,36,0	0/0:30,0:30:78.74:0,79,3033	0/0:25,0:25:72.25:0,72,2849	1/1:12,11:26:66.23:3682,66,0	0/0:27,0:27:81.28:0,81,3106	0/0:18,0:18:45.14:0,45,1719	0/0:28,0:28:81.26:0,81,3113	0/0:21,0:21:63.22:0,63,2503	1/1:8,13:27:57.20:3499,57,0	1/1:8,12:22:54.19:3459,54,0	1/1:15,3:20:51.16:2206,51,0	1/1:11,10:22:57.20:2668,57,0	1/1:3,2:6:12.04:599,12,0	0/0:22,0:22:60.20:0,60,2255	0/0:23,0:23:69.24:0,69,2685	0/0:22,0:22:66.23:0,66,2573	0/0:18,0:18:51.16:0,51,1932	0/0:25,0:25:69.24:0,69,2696	0/0:22,0:21:54.17:0,54,2082	0/0:21,0:21:60.18:0,60,2049
chr10	28574473	.	AC	A	10425.72	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-17.274;DP=602;FS=7.119;HRun=2;HaplotypeScore=130.6085;InbreedingCoeff=0.9997;MQ=89.46;MQ0=0;MQRankSum=-1.008;QD=35.10;ReadPosRankSum=4.054;VQSLOD=3.8316;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,135,1968	1/1:0,9:9:27.09:350,27,0	0/0:23,0:23:60.20:0,60,873	0/0:22,0:22:60.15:0,60,807	0/0:22,0:22:60.20:0,60,898	0/0:13,0:13:39.13:0,39,584	0/0:15,0:15:39.13:0,39,584	1/1:0,27:27:78.23:984,78,0	0/0:20,0:20:54.18:0,54,808	1/1:0,26:26:75.22:958,75,0	1/1:0,16:16:39.08:486,39,0	0/0:25,0:25:66.22:0,66,985	1/1:0,15:15:42.14:545,42,0	1/1:0,15:15:42.14:545,42,0	1/1:1,24:25:63.19:818,63,0	1/1:0,19:19:51.17:662,51,0	0/0:44,0:44:99:0,132,1934	0/0:25,0:25:75.25:0,75,1123	0/0:15,0:15:42.11:0,42,587	0/0:17,0:17:48.16:0,48,719	0/0:19,0:19:51.16:0,51,742	1/1:0,17:17:45.15:584,45,0	1/1:0,21:21:57.17:740,57,0	1/1:0,30:30:84.27:1090,84,0	1/1:1,12:13:30.10:389,30,0	1/1:1,19:20:57.16:722,57,0	1/1:0,23:23:60.19:774,60,0	1/1:1,20:21:60.19:779,60,0
chr10	28574566	.	TAA	T	4543.62	PASS	AB=0.556;AC=19;AF=0.339;AN=56;BaseQRankSum=7.910;DP=587;FS=13.449;HRun=13;HaplotypeScore=115.0339;InbreedingCoeff=0.9166;MQ=78.77;MQ0=6;MQRankSum=-1.736;QD=20.84;ReadPosRankSum=0.093;VQSLOD=2.6074;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,26:30:70.30:695,70,0	0/0:5,0:7:17.42:0,17,210	0/0:47,0:31:38.80:0,39,416	0/0:28,0:16:16.76:0,17,189	1/1:6,24:31:68.74:652,69,0	1/1:0,14:14:36.06:349,36,0	1/1:1,16:18:44.81:419,45,0	0/0:26,0:27:50.14:0,50,666	1/1:0,19:19:51.08:495,51,0	0/0:28,0:31:82.04:0,82,1057	0/0:29,0:30:61.48:0,61,797	1/1:3,16:19:48.05:465,48,0	0/0:20,0:20:53.84:0,54,730	0/0:15,0:15:36.10:0,36,485	0/0:15,0:15:38.60:0,39,512	0/0:11,0:12:29.59:0,30,399	0/0:7,1:36:43.65:0,44,211	0/1:4,2:20:49.54:50,0,54	1/1:5,17:24:45.42:448,45,0	1/1:8,22:30:66.01:622,66,0	1/1:1,12:13:36.05:349,36,0	0/0:13,0:13:27.09:0,27,391	0/0:15,0:17:35.60:0,36,472	0/0:11,0:12:28.94:0,29,347	0/0:13,0:14:32.69:0,33,430	0/0:14,0:14:39.13:0,39,564	0/0:18,0:18:42.14:0,42,606	0/0:11,0:11:24.07:0,24,330
chr10	28574925	.	TA	T	14154.13	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-18.687;DP=819;FS=0.262;HRun=2;HaplotypeScore=178.1192;InbreedingCoeff=0.9998;MQ=79.30;MQ0=0;MQRankSum=-0.861;QD=33.94;ReadPosRankSum=1.465;VQSLOD=4.2756;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,135,1926	1/1:0,10:10:27.09:350,27,0	0/0:22,0:22:63.13:0,63,840	0/0:23,0:23:60.13:0,60,817	0/0:23,0:23:57.12:0,57,765	0/0:24,0:24:69.23:0,69,999	0/0:23,0:23:66.21:0,66,926	1/1:1,43:44:99:1606,126,0	0/0:36,0:36:99:0,105,1505	1/1:0,29:29:84.27:1090,84,0	1/1:0,24:24:63.20:816,63,0	0/0:40,0:40:99:0,117,1676	1/1:0,28:28:81.26:1051,81,0	1/1:1,38:39:96.31:1245,96,0	1/1:0,31:31:75.24:973,75,0	1/1:0,40:40:99:1361,105,0	0/0:35,0:35:99:0,102,1474	0/0:18,0:18:48.12:0,48,673	0/0:27,0:27:78.25:0,78,1097	0/0:32,0:32:93.25:0,93,1290	0/0:51,0:51:99:0,153,2137	1/1:1,30:31:78.25:1012,78,0	1/1:0,14:14:33.11:428,33,0	1/1:0,31:31:84.27:1091,84,0	1/1:0,17:17:48.16:622,48,0	1/1:3,26:29:72.22:915,72,0	1/1:0,30:30:75.24:972,75,0	1/1:0,20:20:48.16:623,48,0
chr10	28575123	.	T	TG	144.59	PASS	AB=0.957;AC=19;AF=0.339;AN=56;BaseQRankSum=-4.784;DP=408;FS=1.914;HRun=0;HaplotypeScore=298.7843;InbreedingCoeff=-0.3097;MQ=44.57;MQ0=1;MQRankSum=-0.159;QD=0.49;ReadPosRankSum=-10.649;VQSLOD=-0.3743;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:6:4.98:0,5,16	0/0:11,0:11:9.13:0,9,37	0/1:17,0:13:11.12:11,0,74	0/1:13,0:13:7.42:7,0,69	0/0:15,0:15:18.85:0,19,52	0/0:12,0:12:15.83:0,16,69	0/1:14,1:15:10.77:11,0,24	0/1:24,1:25:9.58:10,0,83	0/0:18,0:18:3.34:0,3,73	0/1:14,0:14:19.30:19,0,21	0/1:12,0:11:3.37:12,0,3	0/0:12,0:12:6.51:0,7,30	0/1:16,0:16:11.62:40,0,12	0/1:11,1:12:2.85:3,0,22	0/1:25,0:25:32.49:32,0,33	0/1:18,1:19:12.11:12,0,31	0/0:10,0:10:20.69:0,21,73	0/1:12,0:12:6.87:7,0,27	0/1:19,0:17:23.30:23,0,43	0/0:9,0:9:17.21:0,17,49	0/1:3,3:6:4.48:12,0,4	0/1:16,0:16:6.51:7,0,47	0/1:19,0:19:4.29:4,0,42	1/1:4,1:5:1.91:14,2,0	0/0:11,0:11:12.61:0,13,54	0/1:23,1:24:10.41:10,0,62	0/1:25,2:27:44.46:55,0,44	0/0:7,0:7:3.44:0,3,20
chr10	28575178	.	TGA	T	4130.43	PASS	AB=0.995;AC=38;AF=0.679;AN=56;BaseQRankSum=3.016;DP=385;FS=9.590;HRun=0;HaplotypeScore=234.4131;InbreedingCoeff=0.3310;MQ=61.12;MQ0=2;MQRankSum=-4.214;QD=13.15;ReadPosRankSum=-3.121;VQSLOD=1.7508;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,7:10:20.74:272,21,0	1/1:6,0:6:5.13:39,5,0	0/1:21,0:14:42.46:42,0,94	0/1:32,1:22:49.41:90,0,49	1/1:2,6:8:17.27:269,17,0	1/1:0,10:10:30.10:435,30,0	1/1:2,13:15:39.13:572,39,0	1/1:30,0:30:5.45:77,5,0	1/1:1,13:14:36.12:521,36,0	0/0:23,0:23:8.41:0,8,18	0/0:14,0:13:4.62:0,5,9	1/1:1,8:9:24:327,24,0	1/1:20,0:20:10.32:93,10,0	0/0:10,0:10:3.30:0,3,7	0/1:20,0:20:0.42:21,0,0	0/1:12,0:12:1.74:14,0,2	1/1:2,7:8:21.06:299,21,0	1/1:0,7:8:21.07:301,21,0	1/1:5,9:14:28.04:436,28,0	1/1:5,4:9:16.86:211,17,0	1/1:0,2:2:3.01:35,3,0	1/1:17,0:17:3.90:51,4,0	0/0:10,0:10:3.99:0,4,7	0/0:6,0:5:1.48:0,1,3	0/0:8,0:8:3.30:0,3,7	0/1:17,0:17:5.40:9,0,5	0/1:20,0:20:3.93:4,0,9	1/1:8,0:8:0.12:13,0,0
chr10	28575201	.	T	TG	164.32	PASS	AB=0.865;AC=10;AF=0.185;AN=54;BaseQRankSum=2.794;DP=275;FS=0.000;HRun=0;HaplotypeScore=155.4396;InbreedingCoeff=0.3477;MQ=55.93;MQ0=0;MQRankSum=-2.499;QD=4.56;ReadPosRankSum=-0.955;VQSLOD=3.2696;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,1:3:4.73:49,5,0	0/0:1,0:1:3.01:0,3,41	0/0:17,0:10:15.48:0,15,175	0/0:25,0:11:12.21:0,12,121	0/1:6,0:6:3.16:3,0,13	0/1:5,1:6:12.64:59,0,13	0/1:2,1:3:4.37:22,0,4	0/0:28,0:28:72.10:0,72,920	1/1:3,1:4:5.63:65,6,0	0/0:15,0:15:45.15:0,45,624	0/0:13,0:12:33.11:0,33,458	0/1:6,0:6:5.61:6,0,10	0/0:15,0:15:45.15:0,45,625	0/0:9,0:9:23.95:0,24,306	0/0:16,0:16:45.11:0,45,597	0/0:9,0:9:27.06:0,27,354	0/1:4,1:5:2.19:35,0,2	0/0:3,0:3:4.87:0,5,16	0/0:4,0:4:8.34:0,8,51	0/1:2,1:3:4.01:60,0,4	./.	0/0:17,0:17:45.01:0,45,559	0/0:8,0:8:24.08:0,24,333	0/0:8,0:8:15.94:0,16,211	0/0:8,0:8:24.04:0,24,312	0/0:15,0:15:45.11:0,45,603	0/0:19,0:19:57.11:0,57,750	0/0:8,0:8:20.95:0,21,227
chr10	28575203	.	TGTA	T	419.27	PASS	AB=1.000;AC=18;AF=0.333;AN=54;BaseQRankSum=2.230;DP=266;FS=9.208;HRun=0;HaplotypeScore=157.9644;InbreedingCoeff=0.5798;MQ=56.81;MQ0=0;MQRankSum=-4.314;QD=9.32;ReadPosRankSum=-3.835;VQSLOD=1.9090;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,1:3:2.41:66,2,0	0/0:1,0:1:2.92:0,3,17	0/0:14,0:8:12.58:0,13,108	0/0:24,0:11:2.48:0,2,106	1/1:5,1:6:11.71:135,12,0	0/1:6,0:6:5.89:87,0,6	1/1:3,0:3:2.88:15,3,0	0/0:29,0:29:51.19:0,51,565	0/0:4,0:4:5.81:0,6,18	0/0:15,0:15:36.68:0,37,452	0/0:13,0:12:33.10:0,33,417	1/1:5,0:6:7.51:113,8,0	0/0:15,0:15:39.35:0,39,504	0/1:9,0:9:7.82:8,0,217	0/0:15,0:15:33.90:0,34,399	0/0:8,0:8:23.88:0,24,263	1/1:4,0:4:0.26:16,0,0	1/1:3,0:3:5.85:48,6,0	1/1:1,1:2:3.01:43,3,0	1/1:2,1:3:5.04:53,5,0	./.	0/0:17,0:17:34.44:0,34,437	0/0:8,0:8:18.45:0,18,255	0/0:7,0:7:13.57:0,14,196	0/0:8,0:8:20.97:0,21,255	0/0:16,0:16:19.82:0,20,466	0/0:18,0:18:49.24:0,49,614	0/0:7,0:7:14.84:0,15,152
chr10	28577256	.	ACCTC	A	16000.30	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=4.177;DP=669;FS=10.798;HRun=0;HaplotypeScore=150.3707;InbreedingCoeff=0.9966;MQ=87.65;MQ0=0;MQRankSum=-10.726;QD=49.54;ReadPosRankSum=3.742;VQSLOD=5.0731;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,105,2821	1/1:0,5:5:15.05:299,15,0	0/0:31,0:31:90.31:0,90,2350	0/0:22,0:22:59.75:0,60,1452	0/0:11,0:11:33.11:0,33,888	0/0:26,0:26:78.27:0,78,2067	0/0:30,0:30:87.30:0,87,2372	1/1:2,29:31:87.28:1677,87,0	0/0:26,0:26:75.25:0,75,2038	1/1:1,22:23:66.23:1288,66,0	1/1:0,16:16:36.12:696,36,0	0/0:26,0:26:75.26:0,75,2081	1/1:0,20:20:51.18:1017,51,0	1/1:1,30:31:78.27:1555,78,0	1/1:0,32:32:90.31:1795,90,0	1/1:3,27:30:78.27:1526,78,0	0/0:27,0:27:81.28:0,81,2266	0/0:29,0:29:84.29:0,84,2251	0/0:18,0:18:54.19:0,54,1447	0/0:21,0:21:63.22:0,63,1721	0/0:44,0:44:99:0,126,3449	1/1:1,19:20:45.15:898,45,0	1/1:2,15:17:29.89:585,30,0	1/1:0,26:26:57.19:1108,57,0	1/1:0,14:14:39.13:777,39,0	1/1:0,28:28:81.17:1523,81,0	1/1:2,19:21:45.15:897,45,0	1/1:3,6:9:18.06:359,18,0
chr10	28579008	.	GT	G	11441.61	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-4.401;DP=588;FS=1.758;HRun=9;HaplotypeScore=77.5733;InbreedingCoeff=0.9200;MQ=77.95;MQ0=1;MQRankSum=-7.073;QD=21.23;ReadPosRankSum=5.413;VQSLOD=5.2512;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,25:29:66.03:604,66,0	1/1:1,7:8:21.01:192,21,0	0/0:25,1:23:4.65:0,5,376	0/0:23,0:18:26.48:0,26,237	1/1:1,17:18:47.94:429,48,0	1/1:0,29:29:78.04:714,78,0	1/1:3,20:23:51.03:467,51,0	1/1:9,32:41:95.96:854,96,0	1/1:1,24:25:66.04:604,66,0	1/1:5,21:27:64.98:560,65,0	1/1:6,15:21:32.93:292,33,0	1/1:1,17:18:42.02:384,42,0	1/1:1,14:15:42.02:384,42,0	1/1:2,14:16:39.01:357,39,0	1/1:1,11:12:21.01:192,21,0	1/1:4,18:22:54.02:494,54,0	1/1:3,15:18:39.01:357,39,0	1/1:3,16:19:35.97:329,36,0	1/1:4,19:23:53.97:480,54,0	1/1:3,13:16:32.95:293,33,0	1/1:3,13:16:27.01:247,27,0	1/1:1,14:15:42.02:384,42,0	1/1:2,25:27:59.75:548,60,0	1/1:2,9:11:24.01:220,24,0	1/1:0,18:18:48.03:439,48,0	1/1:1,20:21:57.02:522,57,0	1/1:5,31:36:81.04:740,81,0	1/1:1,14:15:39.02:357,39,0
chr10	28579398	.	GGTGTGT	G	975.66	PASS	AB=0.896;AC=26;AF=0.591;AN=44;BaseQRankSum=-2.969;DP=555;FS=1.191;HRun=0;HaplotypeScore=135.8424;InbreedingCoeff=0.5030;MQ=58.53;MQ0=23;MQRankSum=-3.803;QD=3.60;ReadPosRankSum=1.106;VQSLOD=2.6912;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:29:2.96:0,3,59	./.	./.	./.	0/0:29,0:29:5.75:0,6,41	0/0:19,0:18:15.05:0,15,236	0/0:22,0:22:8.93:0,9,169	./.	0/0:19,0:19:12.04:0,12,250	./.	1/1:11,3:15:6.02:120,6,0	0/0:18,0:17:5.70:0,6,105	0/1:14,4:19:12.89:150,0,13	1/1:8,3:10:6.02:120,6,0	./.	1/1:9,2:11:3:60,3,0	1/1:27,0:28:5.34:83,5,0	1/1:19,0:22:9.03:125,9,0	0/0:17,0:16:12.03:0,12,211	0/0:17,0:17:5.69:0,6,84	0/1:19,0:17:0:0,0,0	1/1:14,0:15:6.01:99,6,0	1/1:8,4:12:2.97:20,3,0	1/1:35,3:35:2.76:21,3,0	1/1:22,4:25:6.91:99,7,0	1/1:23,1:23:3.01:60,3,0	1/1:16,5:21:8.53:166,9,0	1/1:7,0:7:0.89:2,1,0
chr10	28579403	.	G	GTATA	2275.09	PASS	AB=0.774;AC=15;AF=0.268;AN=56;BaseQRankSum=8.331;DP=568;FS=10.610;HRun=0;HaplotypeScore=123.8894;InbreedingCoeff=0.5346;MQ=54.68;MQ0=24;MQRankSum=-1.238;QD=9.29;ReadPosRankSum=0.345;VQSLOD=2.3720;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:7,22:29:0.41:0,0,1	0/0:3,0:3:6.02:0,6,99	0/0:22,0:15:42.14:0,42,710	0/0:15,0:7:18.06:0,18,265	1/1:35,0:34:47.42:763,47,0	1/1:5,18:23:15.05:309,15,0	0/1:17,14:32:23.26:142,0,23	0/0:25,0:20:60.17:0,60,885	1/1:1,16:20:12.04:332,12,0	0/0:28,0:25:72.67:0,73,1167	0/0:13,0:13:20.98:0,21,302	1/1:3,15:18:5.71:118,6,0	0/0:17,0:17:43.35:0,43,526	0/0:11,0:10:23.27:0,23,289	0/0:11,0:10:15.05:0,15,244	0/0:10,0:10:18.03:0,18,231	0/1:29,0:28:31.52:32,0,32	0/1:18,0:18:7.82:8,0,39	1/1:7,12:20:10.57:712,11,0	0/1:6,13:19:19.34:32,0,19	0/1:9,16:24:0:0,0,0	0/0:13,0:13:24.95:0,25,421	0/0:12,0:12:21.05:0,21,294	0/0:35,0:32:44.39:0,44,714	0/0:26,0:24:13.49:0,13,917	0/0:22,0:21:63.20:0,63,1025	0/0:21,0:21:51.63:0,52,733	0/0:8,0:7:15.05:0,15,224
chr10	28579811	.	A	AGGGGT	4152.51	PASS	AB=1.000;AC=31;AF=0.554;AN=56;BaseQRankSum=-4.751;DP=336;FS=18.126;HRun=0;HaplotypeScore=71.8821;InbreedingCoeff=0.7470;MQ=90.23;MQ0=1;MQRankSum=-4.506;QD=27.68;ReadPosRankSum=-2.500;VQSLOD=1.4714;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:36.12:0,36,619	1/1:0,3:3:6.02:174,6,0	0/1:22,0:17:31.86:32,0,156	0/0:29,0:24:10.86:0,11,292	0/0:10,0:10:15.05:0,15,242	0/0:19,0:19:45.15:0,45,815	0/0:10,0:10:4.11:0,4,88	1/1:12,3:15:15.04:298,15,0	0/0:11,0:11:27.09:0,27,506	1/1:6,7:13:18.06:494,18,0	1/1:5,2:7:6.02:174,6,0	0/0:16,0:16:24.08:0,24,448	1/1:5,5:11:21.07:568,21,0	1/1:4,7:12:21.07:580,21,0	1/1:7,1:8:15.03:218,15,0	1/1:1,2:3:6.02:174,6,0	0/0:17,0:17:27.06:0,27,454	0/0:14,0:14:24.08:0,24,436	0/0:7,0:7:6.02:0,6,114	0/0:8,0:8:9.03:0,9,145	0/0:27,0:27:60.21:0,60,1131	1/1:4,2:6:3.01:32,3,0	1/1:4,3:7:6.02:174,6,0	1/1:3,2:5:0.47:1,0,0	1/1:3,5:9:9.03:254,9,0	1/1:6,7:13:21.05:393,21,0	1/1:7,1:8:15.03:323,15,0	1/1:4,4:8:9.03:261,9,0
chr10	28580259	.	T	TTCTCTC	1083.10	PASS	AB=1.000;AC=25;AF=0.500;AN=50;BaseQRankSum=3.227;DP=468;FS=24.447;HRun=0;HaplotypeScore=138.0550;InbreedingCoeff=0.1143;MQ=60.99;MQ0=13;MQRankSum=-1.472;QD=3.88;ReadPosRankSum=-2.892;VQSLOD=0.3852;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:8.93:0,9,179	./.	./.	./.	0/1:15,0:15:16.56:17,0,54	0/0:20,0:20:9.50:0,10,176	0/0:19,0:17:6:0,6,84	1/1:27,0:26:0.47:1,0,0	0/1:11,0:10:17.75:18,0,23	1/1:10,0:9:8.98:85,9,0	0/1:9,0:9:0:0,0,0	0/0:14,0:14:9.47:0,9,95	0/1:15,0:15:24.95:42,0,25	0/1:19,0:19:71.62:109,0,72	1/1:19,0:17:15.89:141,16,0	1/1:15,0:14:2.45:49,2,0	1/1:10,7:19:6.01:97,6,0	0/1:15,0:13:21.08:153,0,21	0/0:20,0:20:1.43:0,1,45	0/0:11,0:9:6.02:0,6,112	0/0:28,0:28:15.05:0,15,252	0/1:15,0:15:16.91:17,0,21	0/0:13,0:12:9.03:0,9,176	0/1:23,0:22:15.33:32,0,15	1/1:16,0:16:5.02:48,5,0	0/1:21,0:21:65.92:182,0,66	1/1:16,0:16:10.43:177,10,0	1/1:14,0:13:6.02:72,6,0
chr10	28580297	.	C	CTGTGTG	559.44	PASS	AB=0.982;AC=13;AF=0.250;AN=52;BaseQRankSum=6.791;DP=379;FS=29.168;HRun=0;HaplotypeScore=129.4351;InbreedingCoeff=-0.2459;MQ=38.31;MQ0=27;MQRankSum=-2.132;QD=3.25;ReadPosRankSum=-0.183;VQSLOD=0.7652;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:15.03:0,15,295	1/1:2,0:2:0.28:2,0,0	./.	./.	0/0:9,0:9:9.01:0,9,140	0/1:14,0:12:85.72:86,0,201	0/1:16,0:11:0.66:1,0,109	0/0:12,0:11:31.12:0,31,431	0/0:7,0:6:12.04:0,12,201	0/1:13,0:10:77.35:77,0,405	0/1:11,0:10:18.46:18,0,64	0/1:14,0:13:38.95:39,0,196	0/1:9,3:11:38.27:38,0,200	0/1:21,0:20:31.15:31,0,253	0/0:20,0:16:18.04:0,18,219	0/0:11,0:9:6.43:0,6,46	0/0:21,0:19:16.52:0,17,220	0/0:18,0:16:34.33:0,34,485	0/1:16,0:16:46.29:46,0,532	0/0:12,0:11:6.49:0,6,124	0/0:21,0:19:15.05:0,15,345	0/0:10,4:16:9.03:0,9,163	0/0:19,0:16:9.50:0,10,217	0/0:13,0:11:12.04:0,12,200	0/0:9,0:9:6.02:0,6,84	0/1:22,0:22:85.67:86,0,988	0/1:21,0:20:99:230,0,475	0/1:10,0:6:42.45:42,0,92
chr10	28581558	.	AG	A	2393.44	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.820;DP=547;FS=7.781;HRun=1;HaplotypeScore=72.7796;InbreedingCoeff=0.9585;MQ=78.50;MQ0=0;MQRankSum=0.153;QD=38.60;ReadPosRankSum=3.839;VQSLOD=4.2082;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,117,1832	0/0:4,0:4:12.04:0,12,179	0/0:14,0:14:38.25:0,38,494	0/0:12,0:12:36.12:0,36,537	0/0:22,0:22:29.38:0,29,451	0/0:19,0:19:45.15:0,45,713	0/0:34,0:34:99:0,102,1603	0/0:27,0:27:78.25:0,78,1202	0/0:18,0:18:54.18:0,54,863	0/0:17,0:17:51.17:0,51,796	0/0:7,0:7:18.06:0,18,277	0/0:21,0:21:63.20:0,63,981	0/0:21,0:21:63.19:0,63,975	0/0:15,0:15:45.15:0,45,719	0/0:25,0:25:75.25:0,75,1186	0/0:12,0:12:36.12:0,36,575	1/1:0,39:39:99:1594,114,0	1/1:0,23:23:66.22:921,66,0	0/0:19,0:19:57.19:0,57,911	0/0:7,0:7:11.92:0,12,174	0/0:44,0:44:99:0,129,2052	0/0:20,0:20:54.17:0,54,831	0/0:10,0:10:21.07:0,21,333	0/0:17,0:17:48.16:0,48,764	0/0:14,0:14:39.13:0,39,622	0/0:21,0:21:63.21:0,63,1005	0/0:18,0:16:54.18:0,54,860	0/0:6,0:6:18.06:0,18,288
chr10	28581820	.	T	TCCCTC	17012.99	PASS	AB=0.588;AC=43;AF=0.768;AN=56;BaseQRankSum=-8.631;DP=473;FS=22.281;HRun=0;HaplotypeScore=99.8564;InbreedingCoeff=0.0501;MQ=43.73;MQ0=15;MQRankSum=-0.458;QD=44.65;ReadPosRankSum=5.780;VQSLOD=2.9448;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:5,5:12:44.53:575,0,45	1/1:0,1:2:3.01:95,3,0	0/0:37,0:11:27.06:0,27,497	0/0:53,0:11:30.07:0,30,522	1/1:4,18:23:43.39:1292,43,0	0/1:5,9:14:99:449,0,122	1/1:4,10:17:12:262,12,0	1/1:4,16:24:47.91:980,48,0	1/1:5,11:18:23.57:602,24,0	0/1:4,12:16:62.19:960,0,62	1/1:0,5:6:12.04:379,12,0	0/1:7,6:16:25.93:735,0,26	1/1:6,9:15:14.10:981,14,0	0/1:3,13:19:36.08:638,0,36	1/1:1,10:11:12.13:468,12,0	1/1:2,11:13:9.34:870,9,0	1/1:3,5:11:7.04:630,7,0	1/1:0,6:6:12.04:380,12,0	1/1:4,8:13:30.02:739,30,0	1/1:0,12:12:23.99:572,24,0	0/1:7,18:27:15.12:442,0,15	1/1:2,18:21:35.84:1135,36,0	1/1:0,4:5:15.05:474,15,0	0/1:4,8:15:37.36:362,0,37	0/1:7,12:20:86.47:795,0,86	1/1:3,12:18:48.11:1292,48,0	0/1:2,10:12:90.41:546,0,90	1/1:3,6:9:12.04:359,12,0
chr10	28581868	.	CTT	C	1337.10	PASS	AB=0.812;AC=15;AF=0.278;AN=54;BaseQRankSum=2.314;DP=313;FS=5.173;HRun=4;HaplotypeScore=116.2444;InbreedingCoeff=-0.4449;MQ=34.56;MQ0=38;MQRankSum=-1.043;QD=7.31;ReadPosRankSum=4.472;VQSLOD=-0.1774;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:6,4:10:99:152,0,195	0/0:1,0:1:3.01:0,3,56	./.	0/0:29,0:2:3.01:0,3,56	0/0:18,0:17:34.21:0,34,447	0/1:9,4:12:99:145,0,266	0/1:19,6:25:99:208,0,427	0/0:9,0:3:2.98:0,3,21	0/0:11,0:11:30.10:0,30,544	0/1:12,3:12:98.57:99,0,342	0/0:5,0:4:9.03:0,9,166	0/1:7,2:9:62.77:63,0,288	0/1:7,2:9:81.42:81,0,270	0/1:6,1:7:32.10:32,0,154	0/1:9,2:11:66.17:66,0,237	0/1:5,2:7:72.87:73,0,149	0/0:7,0:7:15.05:0,15,235	0/0:4,0:3:6.02:0,6,104	0/0:7,0:5:12.04:0,12,223	0/0:4,0:4:9.03:0,9,143	0/1:11,4:13:99:145,0,105	0/1:13,1:14:11.16:11,0,395	0/1:6,1:7:23.11:23,0,251	0/1:11,3:13:99:105,0,280	0/1:9,6:15:99:229,0,222	0/0:10,0:9:24.08:0,24,424	0/1:9,2:11:54.79:55,0,393	0/0:2,0:2:6.02:0,6,112
chr10	28581880	.	CCCTT	C	2080.04	PASS	AB=0.969;AC=33;AF=0.611;AN=54;BaseQRankSum=-5.301;DP=298;FS=5.866;HRun=0;HaplotypeScore=112.4765;InbreedingCoeff=-0.4524;MQ=32.51;MQ0=46;MQRankSum=-1.439;QD=9.12;ReadPosRankSum=1.650;VQSLOD=1.8955;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:9,0:9:67.77:68,0,190	1/1:1,0:1:2.97:20,3,0	./.	0/0:32,0:2:3.01:0,3,45	0/1:15,0:14:15.77:96,0,16	0/1:13,0:12:97.91:98,0,271	0/1:22,0:22:99:179,0,251	1/1:10,0:4:2.98:21,3,0	1/1:10,1:11:29.27:212,29,0	0/1:13,0:8:79.07:79,0,134	1/1:4,0:3:2.99:23,3,0	0/1:8,1:9:63.14:63,0,80	0/1:9,1:9:64.36:171,0,64	0/1:8,0:8:49.96:50,0,60	0/1:10,0:10:75.01:125,0,75	0/1:6,0:6:40.23:40,0,63	0/1:7,4:11:99:115,0,183	1/1:1,1:1:3.01:41,3,0	1/1:9,0:5:5.90:43,6,0	1/1:2,1:3:9.01:94,9,0	0/0:12,0:10:9.19:0,9,87	0/1:9,0:9:33.72:74,0,34	0/1:6,0:6:65.94:97,0,66	0/1:12,0:11:76.40:147,0,76	0/1:12,1:13:27.65:28,0,244	0/1:9,0:8:1.23:139,0,1	0/1:11,0:11:77.75:181,0,78	1/1:2,0:2:3:27,3,0
chr10	28581899	.	T	TCC	1188.27	PASS	AB=0.985;AC=30;AF=0.556;AN=54;BaseQRankSum=0.662;DP=244;FS=0.000;HRun=2;HaplotypeScore=102.3032;InbreedingCoeff=-0.3560;MQ=34.82;MQ0=37;MQRankSum=-0.313;QD=6.95;ReadPosRankSum=3.982;VQSLOD=0.3972;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:9,0:9:44.37:80,0,44	./.	0/0:32,0:6:14.61:0,15,165	0/0:36,0:6:8.21:0,8,178	0/1:8,0:8:11.10:11,0,70	0/1:12,0:12:32.31:122,0,32	0/1:11,0:11:19.45:46,0,19	0/0:4,0:2:3.01:0,3,46	1/1:8,0:8:17.50:121,17,0	0/1:9,0:6:36.53:37,0,37	1/1:2,0:1:2.99:24,3,0	0/1:6,0:6:4.54:5,0,24	0/1:8,0:8:29.99:43,0,30	0/1:7,0:7:36.58:37,0,46	0/1:6,0:6:43.96:58,0,44	0/1:4,0:4:11:46,0,11	0/1:7,3:11:99:149,0,158	1/1:1,1:1:3.01:42,3,0	0/1:8,0:4:36.95:42,0,37	1/1:3,0:2:5.96:45,6,0	0/1:10,0:9:26.66:27,0,57	0/1:5,0:5:4.04:57,0,4	0/1:7,0:7:63.22:63,0,77	0/1:8,0:7:1.38:59,0,1	0/1:7,0:7:1.13:1,0,13	1/1:9,0:8:14.52:112,15,0	0/1:10,0:10:59.29:88,0,59	1/1:1,0:1:3:28,3,0
chr10	28581904	.	CTT	C	1969.97	PASS	AB=0.757;AC=31;AF=0.574;AN=54;BaseQRankSum=-0.382;DP=222;FS=0.733;HRun=4;HaplotypeScore=85.0867;InbreedingCoeff=-0.2831;MQ=30.49;MQ0=34;MQRankSum=-2.084;QD=14.07;ReadPosRankSum=3.413;VQSLOD=0.0815;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:5,4:9:99:152,0,107	./.	0/0:37,0:7:20.26:0,20,287	0/0:36,0:5:15.05:0,15,261	0/1:1,6:7:35.50:36,0,53	0/1:7,5:12:99:189,0,138	0/1:6,2:8:72.87:73,0,79	0/0:3,1:2:3.01:0,3,50	1/1:1,6:7:18.53:265,19,0	0/1:6,1:6:51.09:51,0,67	1/1:1,1:1:3.01:44,3,0	0/1:3,1:4:26.04:38,0,26	0/1:3,1:4:43.48:54,0,43	0/1:5,2:7:45.86:79,0,46	0/1:3,3:6:55.95:117,0,56	1/1:0,3:3:9.03:132,9,0	0/1:10,0:11:64.57:65,0,211	1/1:2,0:1:2.97:20,3,0	0/1:6,1:4:47.14:58,0,47	1/1:2,1:2:6.02:88,6,0	0/1:8,0:8:27.08:27,0,54	1/1:1,3:4:9.03:131,9,0	0/1:3,3:6:91.22:117,0,91	0/1:4,1:5:21.93:98,0,22	0/0:3,1:4:5.96:0,6,51	1/1:3,2:6:9.33:97,9,0	0/1:4,4:8:36.85:158,0,37	1/1:0,1:1:3.01:44,3,0
chr10	28581916	.	CCCTT	C	51.83	PASS	AB=0.903;AC=12;AF=0.240;AN=50;BaseQRankSum=3.017;DP=203;FS=13.351;HRun=0;HaplotypeScore=88.9654;InbreedingCoeff=-0.1941;MQ=31.58;MQ0=28;MQRankSum=-1.265;QD=0.76;ReadPosRankSum=2.278;VQSLOD=0.6722;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:7:14.62:0,15,122	./.	0/0:35,0:7:17.81:0,18,354	0/0:46,0:10:13.90:0,14,335	0/1:6,0:6:24.03:24,0,31	0/0:8,0:8:19.89:0,20,227	./.	0/0:6,0:5:8.94:0,9,123	0/1:6,1:7:4.44:4,0,114	0/0:5,0:3:9.85:0,10,79	0/0:3,0:3:8.70:0,9,56	1/1:0,1:1:2.96:19,3,0	0/0:3,0:3:5.95:0,6,43	0/1:5,2:7:16.30:16,0,21	0/1:3,0:3:9.97:10,0,69	0/0:2,0:2:3.01:0,3,38	0/1:10,0:10:20.37:20,0,90	0/0:1,0:1:3.01:0,3,44	0/1:7,0:5:15.98:36,0,16	0/0:3,0:2:2.97:0,3,20	0/1:7,1:8:7.41:7,0,68	0/0:4,0:4:5.70:0,6,40	0/1:5,1:6:8.89:9,0,69	0/1:5,1:5:2.89:3,0,47	./.	0/1:5,2:7:32.20:32,0,53	0/0:5,0:5:11.96:0,12,124	0/0:3,0:3:3.26:0,3,10
chr10	28581929	.	TCTCTCTTCTTCCTTC	T	2039.57	PASS	AB=0.911;AC=30;AF=0.556;AN=54;BaseQRankSum=6.051;DP=204;FS=10.749;HRun=0;HaplotypeScore=107.0099;InbreedingCoeff=-0.1266;MQ=33.20;MQ0=13;MQRankSum=-2.892;QD=20.60;ReadPosRankSum=1.473;VQSLOD=1.6163;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:5,0:5:11.64:107,12,0	1/1:1,0:1:3.01:45,3,0	0/0:37,0:11:24.04:0,24,860	0/0:51,0:13:28.09:0,28,1223	0/0:4,0:4:3.90:0,4,170	0/1:10,0:10:67.43:200,0,67	./.	0/0:9,0:7:20.90:0,21,780	0/1:5,1:6:99:212,0,110	0/1:6,0:5:99:139,0,338	0/1:6,0:6:48.12:48,0,190	1/1:1,1:2:6.02:136,6,0	0/1:4,0:4:50.24:50,0,61	0/1:4,2:6:99:254,0,157	0/0:1,0:1:3.01:0,3,32	1/1:1,0:1:3.01:46,3,0	0/1:8,0:8:36.33:36,0,45	0/0:1,0:1:3.01:0,3,47	0/1:7,0:6:21.05:78,0,21	1/1:1,0:1:3:28,3,0	0/1:6,1:7:65.51:66,0,619	1/1:3,0:3:5.77:92,6,0	0/1:4,1:5:54.58:77,0,55	0/1:3,1:4:45.93:71,0,46	1/1:1,0:1:3.01:50,3,0	0/1:7,2:9:99:235,0,683	1/1:5,0:5:6.76:95,7,0	1/1:2,0:2:6.02:136,6,0
chr10	28581932	.	CTCTTCTT	C	1991.52	PASS	AB=0.801;AC=31;AF=0.574;AN=54;BaseQRankSum=5.592;DP=193;FS=6.395;HRun=0;HaplotypeScore=81.6505;InbreedingCoeff=-0.1848;MQ=33.45;MQ0=12;MQRankSum=-2.780;QD=21.19;ReadPosRankSum=0.013;VQSLOD=2.2475;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,1:5:11.57:122,12,0	1/1:0,1:1:3.01:68,3,0	0/0:32,0:9:17.17:0,17,593	0/0:52,0:13:25.15:0,25,821	0/0:3,1:4:3.01:0,3,126	0/1:5,4:9:57.28:276,0,57	./.	0/0:9,0:6:18.06:0,18,691	0/1:3,3:6:88.71:218,0,89	0/1:3,2:4:99:123,0,240	0/1:3,3:6:57.25:57,0,93	1/1:1,1:2:6.02:98,6,0	0/1:1,2:3:19.92:77,0,20	0/1:4,2:6:99:163,0,107	0/1:2,0:2:10.35:10,0,18	1/1:0,1:1:3.01:69,3,0	0/1:4,1:5:52.43:52,0,82	0/0:2,0:2:1.55:0,2,4	0/1:6,1:6:91.87:92,0,116	1/1:0,1:1:3.01:32,3,0	0/1:7,0:7:55.75:56,0,483	1/1:2,1:3:6.02:118,6,0	1/1:3,1:4:3:27,3,0	0/1:4,0:4:67.80:68,0,103	1/1:0,1:1:3.01:62,3,0	0/1:8,1:9:91.24:91,0,543	0/1:3,2:5:9.28:134,0,9	1/1:0,2:2:6.02:135,6,0
chr10	28581943	.	TC	T	1002.38	PASS	AB=0.703;AC=30;AF=0.536;AN=56;BaseQRankSum=5.634;DP=244;FS=4.289;HRun=3;HaplotypeScore=87.1565;InbreedingCoeff=-0.2431;MQ=37.31;MQ0=15;MQRankSum=-2.342;QD=7.16;ReadPosRankSum=-2.234;VQSLOD=-0.0360;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,2:4:11.95:109,12,0	1/1:1,2:3:7.50:46,8,0	0/0:32,0:7:18.51:0,19,234	0/0:53,1:14:23.37:0,23,310	0/1:3,4:7:8.92:9,0,76	0/1:2,6:8:10.48:114,0,10	0/1:4,4:8:40.23:40,0,114	0/0:12,0:7:21.03:0,21,256	0/1:3,3:6:30.56:48,0,31	0/1:4,6:10:91.20:100,0,91	0/1:3,7:10:68.32:70,0,68	0/1:3,1:4:17.29:17,0,34	0/1:1,5:6:4.78:97,0,5	0/1:3,4:7:27.82:28,0,44	0/1:3,3:6:63.27:63,0,103	1/1:0,3:3:9.01:94,9,0	0/1:4,1:5:4.03:4,0,111	0/0:4,0:3:8.76:0,9,87	0/1:5,1:5:26.50:26,0,39	0/1:1,3:4:28.42:46,0,28	0/1:7,0:7:3.08:3,0,196	1/1:1,2:3:4.70:21,5,0	0/1:2,3:5:5.53:68,0,6	0/1:4,0:4:4.67:5,0,37	1/1:0,5:5:11.25:78,11,0	0/1:9,3:12:20.12:20,0,229	0/1:1,3:4:15.85:20,0,16	1/1:1,2:3:5.94:43,6,0
chr10	28581960	.	CTT	C	4667.52	PASS	AB=0.663;AC=32;AF=0.571;AN=56;BaseQRankSum=3.064;DP=316;FS=4.465;HRun=4;HaplotypeScore=101.2771;InbreedingCoeff=-0.2041;MQ=38.64;MQ0=17;MQRankSum=-2.790;QD=22.12;ReadPosRankSum=2.551;VQSLOD=2.5483;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:6,3:9:55.77:76,0,56	1/1:1,4:4:12.04:175,12,0	0/0:36,1:11:22.76:0,23,274	0/0:44,1:15:28.01:0,28,528	0/1:2,8:10:35.11:35,0,103	1/1:2,11:13:16.84:410,17,0	0/1:4,5:9:99:190,0,144	0/1:17,4:15:99:169,0,157	0/1:2,6:8:32.08:241,0,32	0/1:4,9:13:99:354,0,132	0/1:4,8:12:79.21:325,0,79	0/1:2,3:5:41.08:139,0,41	1/1:3,7:10:24.01:311,24,0	0/1:2,8:10:26.09:291,0,26	0/1:4,5:9:99:189,0,144	1/1:1,4:5:15.05:219,15,0	0/0:11,0:11:7.72:0,8,241	0/0:7,0:6:14.62:0,15,201	0/1:6,3:7:93.76:134,0,94	0/1:1,5:5:40.76:152,0,41	0/1:5,1:6:28.23:28,0,208	1/1:2,4:6:15.05:218,15,0	0/1:1,4:5:24.75:138,0,25	0/1:5,1:6:43.87:69,0,44	1/1:1,8:9:21.06:275,21,0	0/1:8,8:16:99:252,0,181	1/1:3,3:6:17.89:190,18,0	1/1:1,2:3:6.02:84,6,0
chr10	28582006	.	TTCCC	T	12774.69	PASS	AB=0.540;AC=48;AF=0.889;AN=54;BaseQRankSum=0.882;DP=495;FS=15.105;HRun=0;HaplotypeScore=134.0712;InbreedingCoeff=0.6624;MQ=64.84;MQ0=18;MQRankSum=-0.616;QD=33.44;ReadPosRankSum=6.060;VQSLOD=3.4027;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:2,20:22:2.42:675,0,2	1/1:2,4:6:12.04:208,12,0	0/0:43,0:22:35.27:0,35,621	0/0:57,0:31:19.65:0,20,663	1/1:2,10:12:30.09:489,30,0	1/1:5,10:15:39.08:616,39,0	1/1:5,19:24:21.02:320,21,0	./.	1/1:7,8:15:27.09:457,27,0	1/1:3,15:18:48.16:814,48,0	1/1:3,15:18:36.08:595,36,0	1/1:3,16:19:33.11:575,33,0	1/1:2,22:24:57.20:992,57,0	1/1:7,6:13:26.95:396,27,0	1/1:4,14:18:33.11:563,33,0	1/1:1,12:13:24.08:419,24,0	1/1:5,22:27:42.07:700,42,0	0/1:3,12:15:9.82:440,0,10	1/1:5,4:9:20.62:279,21,0	1/1:1,10:11:24.08:388,24,0	1/1:0,14:13:27.09:455,27,0	1/1:9,5:14:30.08:468,30,0	1/1:2,9:11:18.06:294,18,0	1/1:6,9:15:42.11:659,42,0	1/1:2,13:15:33.11:558,33,0	1/1:5,12:17:42.14:732,42,0	1/1:4,8:12:29.93:481,30,0	1/1:0,5:5:12.04:201,12,0
chr10	28582259	.	GAA	G	9408.22	PASS	AB=0.967;AC=53;AF=0.946;AN=56;BaseQRankSum=-2.939;DP=569;FS=0.000;HRun=14;HaplotypeScore=113.5460;InbreedingCoeff=0.6308;MQ=71.95;MQ0=3;MQRankSum=-2.027;QD=17.17;ReadPosRankSum=2.801;VQSLOD=4.0037;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,33:40:74.54:772,75,0	1/1:2,7:9:17.99:166,18,0	0/0:20,0:15:14.63:0,15,153	0/1:28,1:15:8.30:8,0,157	1/1:3,12:16:35.46:300,35,0	1/1:4,25:30:59.91:602,60,0	1/1:3,26:29:68.79:638,69,0	1/1:5,14:20:41.67:368,42,0	1/1:2,9:11:17.96:166,18,0	1/1:5,11:16:32.98:302,33,0	1/1:1,10:12:23.92:269,24,0	1/1:3,12:17:29.45:246,29,0	1/1:1,16:18:35.37:379,35,0	1/1:3,10:14:8.64:201,9,0	1/1:4,13:19:41.50:356,42,0	1/1:5,17:25:59.24:507,59,0	1/1:7,1:23:21.31:152,21,0	1/1:4,1:23:41.22:192,41,0	1/1:4,16:22:13.44:395,13,0	1/1:1,20:21:57.04:527,57,0	1/1:6,9:17:17.59:197,18,0	1/1:6,12:18:29.86:276,30,0	1/1:5,11:16:26.98:250,27,0	1/1:5,20:26:56.79:511,57,0	1/1:4,13:18:32.84:351,33,0	1/1:2,18:22:53.16:511,53,0	1/1:7,21:28:64.05:624,64,0	1/1:2,6:8:14.96:139,15,0
chr10	28582420	.	TGACACGA	T	1451.04	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.011;DP=618;FS=3.040;HRun=0;HaplotypeScore=138.7662;InbreedingCoeff=0.9907;MQ=89.68;MQ0=0;MQRankSum=-6.978;QD=50.04;ReadPosRankSum=1.333;VQSLOD=3.6047;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,126,4884	0/0:5,0:5:15.05:0,15,593	0/0:23,0:23:66.23:0,66,2312	0/0:25,0:25:68.30:0,68,2067	0/0:22,0:22:63.20:0,63,2349	0/0:37,0:37:99:0,105,4162	0/0:31,0:31:93.32:0,93,3728	0/0:26,0:26:75.26:0,75,2878	0/0:18,0:18:54.19:0,54,2119	0/0:25,0:25:75.26:0,75,2948	0/0:19,0:19:57.18:0,57,2204	0/0:16,0:16:48.16:0,48,1883	0/0:19,0:19:54.16:0,54,2018	0/0:21,0:21:63.22:0,63,2467	0/0:28,0:28:81.26:0,81,3096	0/0:25,0:25:75.26:0,75,3000	1/1:2,14:16:35.41:939,35,0	1/1:1,12:13:24.08:633,24,0	0/0:19,0:19:54.15:0,54,1760	0/0:21,0:20:60.19:0,60,2086	0/0:31,0:31:93.28:0,93,3485	0/0:17,0:17:51.12:0,51,1619	0/0:16,0:16:48.15:0,48,1782	0/0:18,0:18:51.15:0,51,1808	0/0:13,0:13:36.12:0,36,1418	0/0:36,0:36:99:0,105,4152	0/0:21,0:21:63.20:0,63,2435	0/0:13,0:13:39.13:0,39,1574
chr10	28582937	.	C	CGGCAAAGGCTGTGTGGGAACCAT	129590.25	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-3.223;DP=649;FS=1.883;HRun=0;HaplotypeScore=347.2756;InbreedingCoeff=0.9992;MQ=79.57;MQ0=0;MQRankSum=-11.462;QD=217.80;ReadPosRankSum=6.370;VQSLOD=4.3469;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:36,4:42:99:7843,99,0	1/1:8,2:11:30.10:2458,30,0	0/0:30,0:30:81.28:0,81,3726	0/0:24,0:24:62.51:0,63,2326	1/1:16,5:26:51.18:3803,51,0	1/1:12,6:19:54.19:4365,54,0	1/1:27,1:30:81.28:7008,81,0	1/1:23,0:23:69.23:3603,69,0	1/1:12,8:21:60.21:5184,60,0	1/1:23,6:30:90.31:7315,90,0	1/1:12,4:18:48.16:3414,48,0	1/1:18,12:34:93.32:9421,93,0	1/1:16,6:24:60.21:5466,60,0	1/1:13,8:24:63.22:5594,63,0	1/1:18,6:26:69.24:6191,69,0	1/1:18,9:27:78.27:7154,78,0	1/1:14,5:25:51.18:5195,51,0	1/1:11,2:16:39.13:3722,39,0	1/1:11,0:11:33.11:2461,33,0	1/1:9,4:15:33.11:3012,33,0	1/1:17,0:17:42.14:2232,42,0	1/1:17,5:24:63.22:5061,63,0	1/1:14,2:17:39.13:2957,39,0	1/1:15,6:24:54.19:4651,54,0	1/1:18,3:22:60.21:4705,60,0	1/1:25,2:30:87.24:7318,87,0	1/1:20,6:27:75.26:6413,75,0	1/1:6,5:11:33.11:3044,33,0
chr10	28584833	.	C	CCTT	37656.96	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=3.224;DP=779;FS=5.663;HRun=0;HaplotypeScore=243.6629;InbreedingCoeff=0.9799;MQ=59.92;MQ0=1;MQRankSum=-10.631;QD=52.23;ReadPosRankSum=3.561;VQSLOD=4.7717;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,30:40:99:1988,102,0	1/1:5,7:12:33.11:672,33,0	0/0:33,0:33:67.65:0,68,1156	0/0:25,0:23:52.58:0,53,694	1/1:3,27:30:72.16:1482,72,0	1/1:3,15:18:54.13:1152,54,0	1/1:11,33:44:99:2380,113,0	1/1:17,17:34:96.29:1769,96,0	1/1:13,23:36:99:2036,108,0	1/1:12,26:37:99:2080,99,0	1/1:7,15:22:51:958,51,0	1/1:2,25:27:81.15:1714,81,0	1/1:2,31:33:99:2176,99,0	1/1:10,25:35:93.26:1873,93,0	1/1:9,27:36:99:2098,108,0	1/1:1,20:21:63.21:1379,63,0	1/1:7,17:24:66.17:1323,66,0	1/1:4,9:13:35.99:618,36,0	1/1:10,12:21:60.09:1110,60,0	1/1:8,16:24:65.92:1298,66,0	1/1:21,22:43:90.62:1376,91,0	1/1:8,16:22:57:1040,57,0	1/1:2,6:8:18.06:366,18,0	1/1:10,28:39:69.05:1297,69,0	1/1:12,19:30:78.26:1597,78,0	1/1:7,30:36:99:2205,102,0	1/1:8,16:24:75.22:1491,75,0	1/1:2,2:4:11.97:181,12,0
chr10	28584859	.	C	CT	28580.47	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=2.981;DP=766;FS=5.977;HRun=0;HaplotypeScore=211.6304;InbreedingCoeff=0.9341;MQ=80.23;MQ0=1;MQRankSum=-13.253;QD=41.42;ReadPosRankSum=6.522;VQSLOD=3.2920;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,40:44:99:1696,111,0	1/1:0,13:13:39.13:622,39,0	0/0:33,0:33:99:0,99,1303	0/0:43,0:42:99:0,101,1408	1/1:0,26:26:36.12:574,36,0	1/1:0,19:19:48.16:765,48,0	1/1:0,41:41:99:1722,108,0	1/1:0,26:26:75.26:1189,75,0	1/1:0,34:34:99:1575,99,0	1/1:1,36:37:99:1770,111,0	1/1:0,20:20:48.16:764,48,0	1/1:0,28:28:84.29:1336,84,0	1/1:0,34:34:96.33:1529,96,0	1/1:0,34:34:87.30:1375,87,0	1/1:0,25:25:75.26:1194,75,0	1/1:0,22:22:66.23:1052,66,0	1/1:0,25:25:66.21:1052,66,0	1/1:0,20:20:57.19:909,57,0	1/1:0,23:23:69.24:1102,69,0	1/1:0,23:23:63.21:989,63,0	1/1:2,39:41:99:1626,102,0	1/1:0,27:25:63.21:1002,63,0	1/1:0,6:6:12.04:191,12,0	1/1:2,39:41:69.20:1101,69,0	1/1:0,25:24:60.20:956,60,0	1/1:0,36:36:99:1629,105,0	1/1:0,17:16:48.16:765,48,0	1/1:1,2:3:6.02:94,6,0
chr10	28585428	.	AGTGAGATTACTTGACTC	A	44820.20	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=8.448;DP=547;FS=1.916;HRun=0;HaplotypeScore=304.2847;InbreedingCoeff=0.8874;MQ=87.38;MQ0=0;MQRankSum=-11.165;QD=91.10;ReadPosRankSum=6.702;VQSLOD=4.0582;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,24:34:63.17:2918,63,0	1/1:0,10:10:27.05:1181,27,0	0/0:23,0:23:60.19:0,60,3842	0/0:32,0:32:84.25:0,84,5282	1/1:4,12:16:27.06:1129,27,0	1/1:1,14:15:36.12:1736,36,0	1/1:5,15:20:36.12:1735,36,0	1/1:10,17:27:51.14:1584,51,0	1/1:8,25:33:63.22:3058,63,0	1/1:2,12:14:36.11:1641,36,0	1/1:0,11:11:33.07:1470,33,0	1/1:4,16:20:42.14:2055,42,0	1/1:2,13:15:30.10:1468,30,0	1/1:4,16:20:45.15:2202,45,0	1/1:3,14:17:33.11:1602,33,0	1/1:3,16:19:39.13:1908,39,0	1/1:2,19:21:36.12:1695,36,0	1/1:2,3:5:9.03:429,9,0	1/1:3,18:21:54.13:2018,54,0	1/1:5,21:26:54.18:2521,54,0	1/1:8,5:13:3.01:132,3,0	1/1:9,17:26:48.04:1922,48,0	1/1:2,11:13:21:1028,21,0	1/1:1,13:14:26.80:1033,27,0	1/1:2,16:18:45.15:2134,45,0	1/1:5,19:24:51.13:1976,51,0	1/1:5,22:27:56.72:2775,57,0	1/1:0,13:13:30.10:1468,30,0
chr10	28585918	.	CT	C	11999.40	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-3.046;DP=550;FS=4.992;HRun=9;HaplotypeScore=122.9211;InbreedingCoeff=0.8799;MQ=68.42;MQ0=1;MQRankSum=-2.991;QD=22.90;ReadPosRankSum=3.930;VQSLOD=3.9995;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,32:32:87.05:795,87,0	1/1:1,9:10:24.01:219,24,0	0/0:19,0:11:17.03:0,17,154	0/0:7,0:7:8.51:0,9,80	1/1:3,31:34:87.03:795,87,0	1/1:0,18:18:51.03:466,51,0	1/1:1,3:4:9:82,9,0	1/1:5,30:35:86.27:749,86,0	1/1:2,20:22:54.03:492,54,0	1/1:2,24:27:74.07:663,74,0	1/1:2,21:23:59.80:526,60,0	1/1:0,17:17:48.03:439,48,0	1/1:1,16:17:42.02:383,42,0	1/1:0,13:13:39.02:354,39,0	1/1:0,12:12:36.02:329,36,0	1/1:3,17:20:51.02:465,51,0	1/1:2,20:22:48.01:439,48,0	1/1:4,26:30:69.04:631,69,0	1/1:10,10:21:40.63:339,41,0	1/1:3,19:22:53.94:482,54,0	1/1:0,10:10:30.02:274,30,0	1/1:5,7:12:24.47:217,24,0	1/1:3,16:19:45.02:411,45,0	1/1:0,2:2:6:55,6,0	1/1:3,26:29:72.03:658,72,0	1/1:3,27:30:80.77:720,81,0	1/1:3,24:27:66.03:603,66,0	1/1:1,15:16:45.02:412,45,0
chr10	28586615	.	C	CT	24828.67	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=7.349;DP=700;FS=7.065;HRun=1;HaplotypeScore=199.5473;InbreedingCoeff=0.9995;MQ=77.66;MQ0=0;MQRankSum=-11.964;QD=38.49;ReadPosRankSum=4.624;VQSLOD=3.6700;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,36:45:99:1491,105,0	1/1:2,10:12:33.10:475,33,0	0/0:31,0:31:85.05:0,85,1096	0/0:24,0:24:72.15:0,72,883	1/1:1,27:28:71.97:1048,72,0	1/1:3,17:20:54:757,54,0	1/1:3,17:20:60.15:827,60,0	1/1:5,20:25:69.16:945,69,0	1/1:2,27:29:81.27:1184,81,0	1/1:6,36:42:99:1614,111,0	1/1:4,17:21:51.07:708,51,0	1/1:3,21:24:66.14:951,66,0	1/1:3,17:20:57.14:808,57,0	1/1:3,26:29:84.28:1235,84,0	1/1:6,30:36:90.26:1300,90,0	1/1:4,33:37:99:1566,108,0	1/1:4,12:16:36.03:492,36,0	1/1:0,11:11:30.10:444,30,0	1/1:1,17:18:51.13:722,51,0	1/1:1,24:25:72.24:1075,72,0	1/1:10,15:25:41.94:468,42,0	1/1:6,18:24:66.20:948,66,0	1/1:0,18:18:51.17:752,51,0	1/1:1,17:18:48.08:666,48,0	1/1:0,18:18:54.18:804,54,0	1/1:6,20:26:72.23:1021,72,0	1/1:1,35:36:99:1541,105,0	1/1:0,22:22:66.22:987,66,0
chr10	28586627	.	T	TG	25492.57	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=7.601;DP=696;FS=9.653;HRun=1;HaplotypeScore=202.7967;InbreedingCoeff=0.9993;MQ=73.51;MQ0=0;MQRankSum=-10.272;QD=39.28;ReadPosRankSum=4.131;VQSLOD=2.8441;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,44:46:99:1752,132,0	1/1:0,11:11:33.11:493,33,0	0/0:24,0:24:63.06:0,63,761	0/0:23,0:23:57.09:0,57,680	1/1:3,25:28:63.11:883,63,0	1/1:2,20:22:63.13:894,63,0	1/1:1,23:24:69.16:986,69,0	1/1:6,20:26:75.17:1022,75,0	1/1:2,28:30:81.26:1189,81,0	1/1:5,33:38:90.28:1464,90,0	1/1:2,20:22:56.95:753,57,0	1/1:0,22:22:63.21:930,63,0	1/1:3,20:23:66.17:937,66,0	1/1:2,25:27:81.26:1188,81,0	1/1:1,37:38:96.26:1400,96,0	1/1:2,34:36:99:1449,102,0	1/1:0,16:16:38.79:569,39,0	1/1:0,9:9:27.09:403,27,0	1/1:2,15:17:48.07:671,48,0	1/1:0,27:27:78.26:1163,78,0	1/1:3,19:22:53.98:718,54,0	1/1:3,24:27:78.08:1089,78,0	1/1:0,21:21:56.78:786,57,0	1/1:1,20:21:54:714,54,0	1/1:0,18:18:51.10:734,51,0	1/1:1,24:25:75.25:1118,75,0	1/1:3,33:37:99:1494,105,0	1/1:3,13:16:48.15:693,48,0
chr10	28587507	.	AACACACAC	A	5096.46	PASS	AB=0.826;AC=34;AF=0.680;AN=50;BaseQRankSum=1.500;DP=379;FS=5.738;HRun=0;HaplotypeScore=117.2347;InbreedingCoeff=0.2104;MQ=69.25;MQ0=14;MQRankSum=0.058;QD=22.26;ReadPosRankSum=4.270;VQSLOD=3.6067;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:16,5:20:8.23:129,8,0	0/1:7,2:9:12.54:202,0,13	0/0:45,0:23:27.09:0,27,848	0/0:45,0:28:39.02:0,39,1072	1/1:5,2:7:6.02:157,6,0	0/1:9,2:11:5.87:65,0,6	1/1:7,2:10:9.03:227,9,0	1/1:9,3:12:11.70:267,12,0	0/1:6,3:9:44.99:208,0,45	1/1:8,5:14:39.04:856,39,0	1/1:7,0:7:12.04:244,12,0	0/1:9,1:10:22.81:84,0,23	0/1:7,0:7:18.15:72,0,18	./.	./.	1/1:5,1:6:9.02:177,9,0	0/0:12,0:12:15.04:0,15,237	0/0:14,0:13:30.55:0,31,540	0/1:8,1:7:22.71:118,0,23	0/1:8,3:11:1.99:173,0,2	./.	1/1:18,2:20:30.09:647,30,0	1/1:17,2:19:12.13:339,12,0	1/1:12,0:12:3.01:48,3,0	1/1:8,3:12:9:211,9,0	1/1:10,1:11:17.99:538,18,0	1/1:7,2:9:5.01:211,5,0	0/1:1,2:3:20.66:126,0,21
chr10	28587554	.	A	ACC	4412.42	PASS	AB=0.665;AC=28;AF=0.500;AN=56;BaseQRankSum=-0.709;DP=670;FS=9.262;HRun=0;HaplotypeScore=131.4949;InbreedingCoeff=-0.3643;MQ=52.83;MQ0=17;MQRankSum=1.230;QD=8.04;ReadPosRankSum=-0.427;VQSLOD=3.5476;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:15,8:23:76.71:144,0,77	0/1:5,4:9:22.64:55,0,23	0/0:25,0:8:7.62:0,8,148	0/0:50,0:22:23.33:0,23,536	1/1:18,17:35:23.86:200,24,0	0/1:7,9:17:33.37:83,0,33	0/1:9,8:16:68.73:69,0,85	0/1:33,22:52:99:805,0,752	1/1:6,12:17:1.35:4,1,0	0/1:14,19:34:99:699,0,421	0/1:9,8:18:51.74:52,0,74	0/1:11,10:21:73.53:109,0,74	0/1:6,11:17:1.25:147,0,1	0/0:7,6:12:0:0,0,0	1/1:6,15:23:2.97:20,3,0	0/1:7,10:18:29.63:30,0,109	0/0:17,0:16:36.56:0,37,504	0/0:16,0:15:42.12:0,42,564	0/1:17,15:33:99:454,0,290	0/1:14,12:26:99:195,0,138	1/1:16,1:14:17.90:298,18,0	0/1:14,10:24:34.61:43,0,35	0/1:10,13:23:21.86:22,0,118	1/1:9,2:11:2.09:8,2,0	0/1:13,18:33:76.30:172,0,76	0/1:14,11:26:99:429,0,326	0/1:10,15:25:99:213,0,112	0/1:11,6:17:99:162,0,166
chr10	28587556	.	A	ACC	119.44	PASS	AB=0.991;AC=12;AF=0.214;AN=56;BaseQRankSum=1.190;DP=669;FS=0.000;HRun=0;HaplotypeScore=145.2901;InbreedingCoeff=-0.0751;MQ=55.73;MQ0=17;MQRankSum=-1.871;QD=0.43;ReadPosRankSum=5.134;VQSLOD=2.3000;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,1:21:7.17:0,7,173	0/0:8,0:8:8.84:0,9,65	0/0:26,0:9:7.29:0,7,167	0/0:52,0:24:59.47:0,59,729	0/0:36,0:35:26.73:0,27,210	0/0:19,0:17:11.71:0,12,95	0/0:17,0:16:3.78:0,4,152	0/1:54,2:52:80.30:80,0,953	0/1:19,0:18:0.03:0,0,21	0/1:32,0:32:7.24:7,0,494	0/1:17,0:17:2.19:2,0,74	0/0:22,0:21:20.83:0,21,172	0/1:17,0:17:13.80:14,0,88	0/0:14,0:13:2.97:0,3,20	0/0:25,0:25:8.65:0,9,96	0/0:16,0:16:11.66:0,12,125	0/0:16,0:15:33.57:0,34,481	0/0:17,0:16:42.12:0,42,582	0/1:36,0:34:33.10:33,0,592	0/0:26,0:26:25.32:0,25,316	0/1:16,0:13:0.12:0,0,1	0/0:24,0:23:8.48:0,8,87	0/0:24,0:24:14.82:0,15,192	1/1:10,0:10:2.09:8,2,0	0/1:33,0:33:70.27:70,0,91	0/1:27,0:27:4.68:5,0,384	0/0:25,0:25:21.85:0,22,206	0/1:16,1:17:24.17:24,0,204
chr10	28588662	.	AAAACAAAAAACAAAAAAAACAAAACAAAAC	A	610.83	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=-9.567;DP=468;FS=14.685;HRun=0;HaplotypeScore=362.7970;InbreedingCoeff=-0.1596;MQ=55.32;MQ0=5;MQRankSum=4.165;QD=2.43;ReadPosRankSum=-2.652;VQSLOD=0.5510;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:14,0:14:9.13:9,0,1861	0/1:4,0:4:30.04:30,0,297	0/0:16,0:11:10.24:0,10,619	0/0:29,0:15:34.36:0,34,1519	0/1:28,0:28:8.04:8,0,3550	0/0:10,0:10:23.85:0,24,1569	0/1:6,0:6:10.89:11,0,684	0/1:28,0:26:24.71:25,0,2121	0/0:15,0:15:8.82:0,9,1492	0/1:27,0:26:15.47:15,0,3127	0/0:15,0:13:17.41:0,17,1737	0/0:14,0:14:26.90:0,27,1292	0/0:10,0:10:1.19:0,1,1377	0/1:8,0:8:3.94:4,0,781	0/0:15,0:15:33.11:0,33,2102	0/0:13,0:12:30.09:0,30,2046	1/1:0,25:25:2.93:235,3,0	1/1:2,25:27:5.99:257,6,0	0/1:25,0:25:37.85:38,0,2395	0/1:14,0:14:17.69:18,0,1622	0/1:7,0:6:15.63:16,0,258	0/0:14,0:14:22.63:0,23,975	0/1:14,0:14:34.71:35,0,1471	0/1:9,0:9:8.72:9,0,539	0/0:20,0:19:51.10:0,51,3076	0/0:23,0:23:17.44:0,17,3242	0/0:23,0:23:32.80:0,33,1233	0/1:15,0:15:57.48:57,0,2032
chr10	28588664	.	AAC	A	1171.86	PASS	AB=0.990;AC=28;AF=0.500;AN=56;BaseQRankSum=-3.632;DP=466;FS=57.945;HRun=0;HaplotypeScore=155.7235;InbreedingCoeff=-0.7051;MQ=54.00;MQ0=5;MQRankSum=2.782;QD=2.63;ReadPosRankSum=2.045;VQSLOD=0.7856;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:14,0:14:27.84:28,0,81	0/1:4,0:4:2.14:2,0,5	0/0:15,0:10:10.33:0,10,212	0/1:28,1:15:23.85:24,0,282	0/1:28,0:28:99:118,0,103	0/1:9,0:9:17.28:17,0,41	0/0:6,0:6:1.18:0,1,41	0/1:28,1:27:61.84:105,0,62	0/1:15,0:15:42.58:43,0,51	0/1:26,1:26:81.21:134,0,81	0/1:15,0:13:16.31:16,0,53	0/1:14,0:14:4.94:61,0,5	0/1:10,0:10:17.31:64,0,17	0/1:8,0:8:25.97:30,0,26	0/1:15,0:15:32.55:33,0,75	0/1:12,1:12:50.22:69,0,50	1/1:25,0:25:2.99:23,3,0	1/1:27,0:27:5.79:35,6,0	0/1:25,0:25:66.85:103,0,67	0/1:14,0:14:30.87:31,0,53	0/1:7,0:6:13.71:14,0,24	0/1:13,1:14:24.92:66,0,25	0/1:14,0:14:46.07:46,0,63	0/1:9,0:9:2.84:30,0,3	0/1:20,0:19:25.82:26,0,116	0/1:22,0:22:77.58:78,0,91	0/1:23,0:23:37.94:67,0,38	0/1:15,0:15:56.62:57,0,106
chr10	28588665	.	AC	A	5649.81	PASS	AB=0.813;AC=45;AF=0.804;AN=56;BaseQRankSum=-7.028;DP=466;FS=72.572;HRun=1;HaplotypeScore=137.7343;InbreedingCoeff=-0.0856;MQ=52.45;MQ0=6;MQRankSum=0.129;QD=12.50;ReadPosRankSum=2.394;VQSLOD=1.3485;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:11,3:14:23.16:151,0,23	1/1:3,0:4:10.16:76,10,0	0/0:13,0:9:10.27:0,10,168	0/1:25,4:15:69.31:69,0,199	1/1:16,9:28:16.57:469,17,0	0/1:6,3:9:1.22:124,0,1	1/1:5,1:6:0.13:74,0,0	1/1:24,6:28:38.95:487,39,0	0/1:11,4:16:0.35:241,0,0	1/1:16,8:26:16.15:486,16,0	1/1:7,7:13:8.84:211,9,0	1/1:2,10:13:14.81:264,15,0	1/1:7,3:10:19.71:229,20,0	0/1:6,2:8:9.76:63,0,10	0/1:8,4:15:18.35:192,0,18	1/1:8,5:12:2.75:238,3,0	1/1:25,0:25:2.92:18,3,0	1/1:25,1:26:5.93:59,6,0	1/1:15,9:25:27.49:469,27,0	1/1:9,4:14:5.72:198,6,0	1/1:5,1:6:3.64:54,4,0	1/1:4,10:14:12.36:216,12,0	0/1:11,2:14:2.28:133,0,2	1/1:5,3:9:12.10:103,12,0	0/1:14,6:19:20.20:243,0,20	1/1:14,8:24:6.97:403,7,0	1/1:5,16:21:4.90:225,5,0	0/1:12,3:15:19.30:154,0,19
chr10	28588666	.	C	CCA	2847.21	PASS	AB=0.887;AC=24;AF=0.429;AN=56;BaseQRankSum=3.564;DP=473;FS=14.725;HRun=0;HaplotypeScore=157.0963;InbreedingCoeff=-0.7641;MQ=50.93;MQ0=6;MQRankSum=-4.642;QD=7.51;ReadPosRankSum=-0.726;VQSLOD=2.5422;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:11,0:15:77.77:127,0,78	0/1:4,0:4:21.67:22,0,48	0/0:14,0:9:7.42:0,7,192	0/0:28,0:15:32.10:0,32,378	0/1:25,2:29:99:245,0,244	0/1:8,1:9:51.39:99,0,51	0/1:7,1:8:39.11:120,0,39	0/1:31,1:30:99:148,0,253	0/1:12,3:15:99:110,0,109	0/1:24,2:26:99:287,0,143	0/1:13,0:13:53.93:54,0,102	0/1:12,0:13:40.43:60,0,40	0/1:10,0:10:76.51:101,0,77	0/1:7,0:8:3.99:4,0,12	0/1:13,0:15:47.51:138,0,48	0/1:11,1:12:50.50:51,0,81	0/0:25,0:25:2.72:0,3,14	0/0:26,0:26:5.40:0,5,23	0/1:22,1:26:99:209,0,221	0/1:12,1:14:90.67:124,0,91	0/1:6,0:5:29.67:30,0,45	0/1:14,0:14:13.31:13,0,90	0/1:7,5:14:64.69:232,0,65	0/1:8,0:9:31.99:32,0,42	0/1:16,1:19:80.68:229,0,81	0/1:21,0:26:99:327,0,107	0/1:20,0:21:12.56:13,0,112	0/1:12,2:15:99:224,0,108
chr10	28588669	.	A	AC	1697.91	PASS	AB=0.859;AC=22;AF=0.393;AN=56;BaseQRankSum=4.101;DP=487;FS=0.442;HRun=0;HaplotypeScore=164.6688;InbreedingCoeff=-0.6776;MQ=46.08;MQ0=6;MQRankSum=-4.891;QD=4.65;ReadPosRankSum=2.447;VQSLOD=3.0541;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:14,1:15:36.73:37,0,155	0/1:4,1:5:17.28:17,0,88	0/0:12,0:7:21.03:0,21,238	0/0:30,0:14:26.34:0,26,368	0/1:23,6:30:99:170,0,356	0/1:7,2:9:67.67:68,0,100	0/1:8,2:10:78.05:87,0,78	0/1:30,6:34:99:149,0,422	0/1:13,4:17:61.88:62,0,195	0/1:17,7:24:99:196,0,213	0/1:13,2:13:78.90:79,0,146	0/1:11,2:13:24.60:25,0,88	0/1:9,2:10:53.40:53,0,107	0/0:4,0:8:3.67:0,4,48	0/1:10,6:16:76.95:77,0,116	0/1:11,2:12:4.04:4,0,139	0/0:25,0:25:1.81:0,2,7	0/0:26,0:26:5.19:0,5,27	0/1:24,3:27:59.38:59,0,374	0/1:12,3:15:99:101,0,156	0/1:6,0:5:26.99:27,0,65	0/1:14,1:15:29.68:30,0,118	0/1:13,1:14:73.51:79,0,74	0/1:9,1:10:19.68:20,0,46	0/1:19,3:21:99:133,0,209	0/1:22,6:28:99:291,0,214	0/0:19,2:21:7.56:0,8,179	0/1:10,1:12:86.59:87,0,120
chr10	28588681	.	AC	A	2161.52	PASS	AB=0.984;AC=47;AF=0.839;AN=56;BaseQRankSum=2.015;DP=502;FS=11.011;HRun=1;HaplotypeScore=167.5830;InbreedingCoeff=-0.2325;MQ=46.33;MQ0=5;MQRankSum=-0.898;QD=4.31;ReadPosRankSum=0.676;VQSLOD=-0.7110;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:14:23.38:111,23,0	1/1:6,0:6:9:58,9,0	0/1:22,1:14:15.84:16,0,169	0/1:29,0:12:19.26:19,0,79	1/1:24,1:25:7.42:147,7,0	1/1:8,1:9:12.40:75,12,0	1/1:10,0:10:4.11:94,4,0	0/1:33,2:32:16.07:177,0,16	1/1:15,1:16:9.47:83,9,0	0/1:22,0:21:4.70:69,0,5	1/1:20,0:18:21.93:120,22,0	1/1:13,0:13:3.07:76,3,0	1/1:17,0:16:19.20:162,19,0	1/1:8,0:8:14.77:79,15,0	0/1:18,0:18:14.15:42,0,14	1/1:13,1:13:3.59:70,4,0	1/1:25,0:25:2.37:8,2,0	1/1:25,0:25:2.37:8,2,0	0/1:30,0:30:28.91:146,0,29	1/1:14,1:15:4.85:60,5,0	1/1:7,0:6:0.76:37,1,0	0/1:14,0:14:12.90:84,0,13	0/1:12,0:12:8.09:63,0,8	1/1:9,0:9:6.96:36,7,0	1/1:25,0:24:18.40:177,18,0	1/1:28,0:28:2.31:93,2,0	0/1:17,1:18:12.60:89,0,13	1/1:15,0:15:19.56:99,20,0
chr10	28588682	.	C	CAAA	3980.84	PASS	AB=0.996;AC=40;AF=0.714;AN=56;BaseQRankSum=4.176;DP=505;FS=5.030;HRun=8;HaplotypeScore=184.7820;InbreedingCoeff=0.1952;MQ=46.41;MQ0=5;MQRankSum=0.873;QD=9.90;ReadPosRankSum=1.171;VQSLOD=-0.1791;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:14:25.14:296,25,0	1/1:6,0:6:8.38:50,8,0	0/0:22,0:14:20.46:0,20,204	0/0:29,0:12:16.45:0,16,184	1/1:24,1:25:13.94:321,14,0	1/1:9,1:10:13.93:103,14,0	0/1:11,0:11:15.13:100,0,15	0/1:35,0:32:56.29:154,0,56	0/1:17,0:17:2.93:78,0,3	0/1:22,0:21:34.26:267,0,34	1/1:19,1:18:23.86:234,24,0	1/1:13,0:13:1.02:142,1,0	1/1:18,0:17:19.43:188,19,0	1/1:8,0:8:17.85:141,18,0	1/1:19,0:19:11.63:236,12,0	1/1:14,0:13:20.43:167,20,0	0/0:25,0:25:2.86:0,3,21	0/0:25,0:25:2.66:0,3,21	0/1:29,0:29:11.68:268,0,12	1/1:15,0:15:12.77:123,13,0	0/1:7,0:6:13.48:18,0,13	1/1:13,0:13:11.99:43,12,0	1/1:12,0:12:20.56:161,21,0	1/1:9,0:9:12.05:81,12,0	0/1:25,0:24:6.73:151,0,7	0/1:27,1:28:63.44:309,0,63	1/1:17,0:17:19.66:143,20,0	1/1:15,0:15:10.90:205,11,0
chr10	28588687	.	C	CA	2847.98	PASS	AB=0.898;AC=45;AF=0.804;AN=56;BaseQRankSum=4.178;DP=490;FS=14.116;HRun=4;HaplotypeScore=162.9538;InbreedingCoeff=0.2187;MQ=48.54;MQ0=5;MQRankSum=-2.832;QD=6.83;ReadPosRankSum=1.505;VQSLOD=-0.1916;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,4:16:27.73:249,28,0	1/1:2,5:7:3.31:142,3,0	0/0:22,0:14:8.29:0,8,274	0/1:28,0:10:0.13:0,0,46	1/1:14,8:22:12.30:231,12,0	1/1:8,4:12:24.10:203,24,0	1/1:7,3:10:11.63:129,12,0	1/1:35,4:36:17.64:212,18,0	1/1:15,0:15:1.38:47,1,0	1/1:16,2:19:27.40:217,27,0	1/1:14,4:17:14.42:143,14,0	1/1:12,0:12:3.73:12,4,0	1/1:17,2:18:22.77:169,23,0	1/1:8,0:8:16.91:118,17,0	1/1:19,0:19:1.61:46,2,0	1/1:15,0:14:17.18:95,17,0	0/0:26,0:26:1.81:0,2,7	0/0:25,0:25:2.22:0,2,7	1/1:14,6:25:19.02:286,19,0	0/1:11,1:13:3.03:66,0,3	1/1:7,0:6:2.91:20,3,0	1/1:11,1:12:5.44:39,5,0	0/1:9,2:11:11.43:57,0,11	1/1:8,0:8:6.69:44,7,0	0/1:23,2:24:25.81:160,0,26	1/1:23,2:26:14.13:120,14,0	1/1:14,0:14:3.22:69,3,0	0/1:11,4:15:14.21:110,0,14
chr10	28588689	.	AAAC	A	1644.36	PASS	AB=0.986;AC=29;AF=0.518;AN=56;BaseQRankSum=-8.285;DP=493;FS=5.401;HRun=0;HaplotypeScore=175.1818;InbreedingCoeff=-0.6823;MQ=49.98;MQ0=5;MQRankSum=1.171;QD=3.72;ReadPosRankSum=-8.401;VQSLOD=-0.4469;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:15,0:15:70.26:103,0,70	0/1:8,0:8:22.98:64,0,23	0/0:23,0:15:39.65:0,40,407	0/0:28,0:10:17.08:0,17,211	0/1:21,0:21:26:26,0,193	0/1:12,0:12:36.02:58,0,36	0/1:10,1:11:27.55:70,0,28	0/1:39,1:37:99:232,0,116	0/1:15,1:16:54.73:55,0,97	0/1:20,0:19:52.47:52,0,98	0/1:19,0:17:51.49:106,0,51	0/1:12,0:12:55.58:61,0,56	0/1:18,1:18:10.91:139,0,11	0/1:7,1:8:23.30:104,0,23	0/1:19,0:19:35.55:36,0,118	0/1:15,0:14:40.45:40,0,96	1/1:26,0:26:2.99:23,3,0	1/1:25,0:25:2.84:23,3,0	0/1:25,0:25:71.93:101,0,72	0/1:13,0:13:51.75:52,0,97	1/1:7,0:6:7.05:37,7,0	0/1:12,0:12:10.50:62,0,10	0/1:11,0:11:11.36:11,0,118	0/1:8,0:8:11.63:29,0,12	0/1:27,0:26:73.65:74,0,170	0/1:25,0:25:54.01:54,0,235	0/1:13,0:13:24.01:133,0,24	0/1:15,0:15:54.96:55,0,129
chr10	28588691	.	AC	A	4310.30	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=1.111;DP=488;FS=20.137;HRun=1;HaplotypeScore=153.0632;InbreedingCoeff=0.7849;MQ=49.32;MQ0=5;MQRankSum=-1.889;QD=9.84;ReadPosRankSum=-1.626;VQSLOD=1.0779;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:15:32.27:191,32,0	1/1:8,0:8:18.07:116,18,0	0/0:23,0:15:24.13:0,24,258	0/0:27,0:9:17.75:0,18,124	1/1:20,0:20:32.72:177,33,0	1/1:12,0:12:25.53:162,26,0	1/1:11,0:11:24.59:147,25,0	1/1:38,0:35:59.78:427,60,0	1/1:15,1:16:27.40:171,27,0	1/1:20,0:19:42.88:254,43,0	1/1:18,1:17:27.19:179,27,0	1/1:11,1:12:20.18:144,20,0	1/1:19,0:18:42.45:257,42,0	1/1:8,1:9:15.45:144,15,0	1/1:18,0:18:17.97:120,18,0	1/1:15,0:14:20.91:133,21,0	1/1:26,0:26:2.60:11,3,0	1/1:25,0:25:2.60:11,3,0	1/1:22,2:24:53.91:300,54,0	1/1:14,0:14:22.23:151,22,0	1/1:7,1:7:15.37:125,15,0	1/1:12,0:12:22.48:128,22,0	1/1:12,0:12:11.77:98,12,0	1/1:6,0:6:9.14:56,9,0	1/1:26,0:25:41.60:270,42,0	1/1:26,0:26:33.59:220,34,0	1/1:11,1:12:25.83:167,26,0	1/1:14,1:15:17.81:150,18,0
chr10	28588973	.	TA	T	762.40	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.537;DP=329;FS=42.791;HRun=1;HaplotypeScore=40.0788;InbreedingCoeff=0.8729;MQ=88.07;MQ0=0;MQRankSum=-1.329;QD=28.24;ReadPosRankSum=-1.685;VQSLOD=0.6309;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:42.14:0,42,656	0/0:3,0:3:6.02:0,6,94	0/0:19,0:19:51.15:0,51,757	0/0:9,0:9:21.05:0,21,304	0/0:12,0:12:30.10:0,30,418	0/0:13,0:13:39.12:0,39,588	0/0:14,0:14:42.11:0,42,597	0/0:14,0:14:42.14:0,42,635	0/0:11,0:11:30.07:0,30,411	0/0:15,0:15:45.15:0,45,678	0/0:5,0:5:9.03:0,9,127	0/0:9,0:9:27.02:0,27,393	0/0:16,0:16:48.15:0,48,727	0/0:21,0:21:60.20:0,60,937	0/0:6,0:6:18.06:0,18,282	0/0:11,0:11:33.11:0,33,504	1/1:3,11:14:36.07:448,36,0	1/1:1,12:13:35.98:435,36,0	0/0:19,0:19:54.13:0,54,788	0/0:10,0:10:30.10:0,30,459	0/0:21,0:21:63.18:0,63,954	0/0:6,0:6:18.06:0,18,257	0/0:4,0:4:9.03:0,9,137	0/0:10,0:10:30.10:0,30,469	0/0:5,0:5:15.05:0,15,233	0/0:17,0:17:51.17:0,51,797	0/0:13,0:13:36.11:0,36,540	0/0:5,0:5:15.05:0,15,211
chr10	28589006	.	T	TG	531.55	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.088;DP=221;FS=36.808;HRun=5;HaplotypeScore=31.7380;InbreedingCoeff=0.6801;MQ=84.35;MQ0=0;MQRankSum=-2.080;QD=25.31;ReadPosRankSum=0.970;VQSLOD=1.1705;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:7:18.04:0,18,193	0/0:3,0:3:6.02:0,6,64	0/0:12,0:12:27.01:0,27,264	0/0:4,0:4:5.97:0,6,63	0/0:6,0:6:12.03:0,12,129	0/0:6,0:6:18.05:0,18,193	0/0:5,0:5:15.04:0,15,161	0/0:21,0:21:63.15:0,63,670	0/0:8,0:8:18.03:0,18,185	0/0:7,0:7:18.04:0,18,194	0/0:7,0:7:6.01:0,6,64	0/0:5,0:5:15.04:0,15,161	0/0:9,0:9:27.07:0,27,290	0/0:17,0:17:51.09:0,51,536	0/0:3,0:3:6.01:0,6,64	0/0:4,0:4:12.03:0,12,129	1/1:1,12:13:30.10:394,30,0	1/1:2,6:8:21.03:257,21,0	0/0:9,0:9:20.85:0,21,218	0/0:6,0:6:18.03:0,18,183	0/0:21,0:21:54.13:0,54,580	0/0:5,0:5:9.02:0,9,96	0/0:4,0:4:8.92:0,9,81	0/0:7,0:7:18.02:0,18,183	0/0:4,0:4:12.03:0,12,129	0/0:6,0:6:15.04:0,15,161	0/0:12,0:12:30.07:0,30,322	0/0:2,0:2:6.02:0,6,64
chr10	28589769	.	A	AG	4817.11	PASS	AB=1.000;AC=45;AF=0.804;AN=56;BaseQRankSum=-5.673;DP=488;FS=76.097;HRun=0;HaplotypeScore=64.6554;InbreedingCoeff=0.1978;MQ=56.65;MQ0=14;MQRankSum=5.123;QD=10.56;ReadPosRankSum=1.127;VQSLOD=2.2154;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:36,0:35:21.45:328,21,0	1/1:5,1:6:14.41:68,14,0	0/0:13,0:3:5.94:0,6,43	0/0:19,0:10:16.39:0,16,125	1/1:20,0:20:44.42:276,44,0	1/1:14,1:15:29.52:246,30,0	1/1:14,0:14:22.11:174,22,0	1/1:35,2:37:67.10:556,67,0	0/1:8,0:8:1.67:108,0,2	1/1:19,0:18:25.58:267,26,0	1/1:11,0:11:15.17:138,15,0	0/1:13,0:11:22.98:67,0,23	0/1:6,0:5:17.31:78,0,17	0/1:17,0:16:5.20:112,0,5	1/1:15,0:15:15.57:170,16,0	0/1:15,0:14:3.14:66,0,3	1/1:29,0:24:13.15:188,13,0	0/1:18,0:15:46.25:114,0,46	1/1:22,0:22:36.74:356,37,0	1/1:20,0:19:14.25:215,14,0	1/1:23,0:21:40.39:282,40,0	0/1:12,0:12:10.45:85,0,10	1/1:19,0:19:21.52:208,22,0	1/1:28,0:26:26.59:189,27,0	1/1:13,0:13:9.71:90,10,0	1/1:17,0:17:31.73:251,32,0	1/1:14,0:13:5.01:102,5,0	1/1:9,0:8:13.61:84,14,0
chr10	28589884	.	CA	C	4261.34	PASS	AB=0.627;AC=43;AF=0.768;AN=56;BaseQRankSum=-0.930;DP=518;FS=4.569;HRun=15;HaplotypeScore=63.2748;InbreedingCoeff=0.0640;MQ=75.54;MQ0=0;MQRankSum=-2.463;QD=8.77;ReadPosRankSum=5.880;VQSLOD=4.1001;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:11,30:41:1.16:316,0,1	1/1:2,7:9:11.77:77,12,0	0/0:15,0:13:10.35:0,10,119	0/0:16,0:16:2.65:0,3,91	1/1:4,16:22:24.94:271,25,0	1/1:6,10:18:30.65:185,31,0	0/1:5,13:18:19.48:124,0,19	1/1:12,24:36:61.83:403,62,0	0/1:3,7:11:6.06:50,0,6	1/1:6,11:19:33.50:204,33,0	1/1:4,8:14:18.61:107,19,0	0/1:8,8:16:16.60:92,0,17	1/1:8,6:14:5.79:38,6,0	0/1:8,7:17:19.93:99,0,20	1/1:3,9:13:20.24:123,20,0	1/1:3,6:10:10.89:63,11,0	1/1:10,26:36:64.93:422,65,0	1/1:4,12:16:2.76:146,3,0	1/1:6,12:18:35.42:230,35,0	0/1:15,7:23:24.24:108,0,24	0/1:8,10:18:13.96:140,0,14	1/1:3,7:10:13.86:94,14,0	1/1:9,12:21:40.03:254,40,0	1/1:11,16:27:34.46:217,34,0	1/1:3,7:11:10.88:64,11,0	1/1:5,15:22:22.04:254,22,0	0/1:4,11:16:0.68:115,0,1	0/1:4,5:10:3.07:65,0,3
chr10	28590467	.	TAA	T	688.89	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=7.991;DP=615;FS=1.578;HRun=9;HaplotypeScore=80.7866;InbreedingCoeff=0.7742;MQ=81.24;MQ0=2;MQRankSum=-1.618;QD=9.84;ReadPosRankSum=-0.506;VQSLOD=0.6258;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:42:99:0,120,1910	0/0:5,0:5:12.04:0,12,195	0/1:33,0:17:12.78:13,0,219	0/0:33,0:20:26.23:0,26,242	0/0:30,0:30:78.27:0,78,1271	0/0:23,0:23:66.21:0,66,1050	0/0:11,0:11:27.09:0,27,437	0/0:32,0:32:78.26:0,78,1244	0/0:20,0:20:51.17:0,51,837	0/0:27,0:27:63.21:0,63,1022	0/0:26,0:26:78.27:0,78,1271	0/0:21,0:21:54.18:0,54,884	0/0:16,0:16:42.14:0,42,671	0/0:34,0:34:90.31:0,90,1461	0/0:15,0:15:42.14:0,42,688	0/0:19,0:19:51.04:0,51,800	1/1:2,19:21:45.13:524,45,0	1/1:1,15:16:24.07:280,24,0	0/0:29,0:29:81.26:0,81,1261	0/0:23,0:23:66.17:0,66,1026	0/0:10,0:10:27.09:0,27,425	0/0:15,0:15:45.15:0,45,715	0/0:11,0:11:27.09:0,27,440	0/0:9,0:9:24.08:0,24,388	0/0:30,0:30:84.26:0,84,1325	0/0:24,0:24:69.23:0,69,1093	0/0:33,0:33:84.29:0,84,1357	0/0:7,0:7:21.07:0,21,332
chr10	28590742	.	TC	T	1679.89	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.783;DP=632;FS=2.784;HRun=1;HaplotypeScore=63.2917;InbreedingCoeff=0.9999;MQ=76.78;MQ0=0;MQRankSum=-2.386;QD=37.33;ReadPosRankSum=2.145;VQSLOD=4.3108;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:99:0,99,1526	0/0:15,0:15:45.13:0,45,681	0/0:15,0:15:45.12:0,45,661	0/0:18,0:17:51.09:0,51,719	0/0:26,0:26:78.27:0,78,1245	0/0:26,0:26:78.27:0,78,1243	0/0:27,0:27:81.27:0,81,1267	0/0:30,0:30:90.31:0,90,1438	0/0:20,0:20:60.20:0,60,955	0/0:27,0:27:81.28:0,81,1296	0/0:18,0:18:54.18:0,54,861	0/0:17,0:17:51.17:0,51,814	0/0:17,0:17:51.17:0,51,814	0/0:32,0:32:93.32:0,93,1486	0/0:23,0:23:69.24:0,69,1103	0/0:19,0:19:57.18:0,57,888	1/1:0,28:28:81.27:1133,81,0	1/1:0,17:17:48.16:669,48,0	0/0:26,0:26:78.23:0,78,1168	0/0:25,0:25:75.26:0,75,1196	0/0:37,0:36:99:0,108,1725	0/0:16,0:16:48.16:0,48,764	0/0:13,0:13:39.09:0,39,595	0/0:33,0:33:99:0,99,1543	0/0:14,0:14:42.14:0,42,671	0/0:24,0:24:72.24:0,72,1140	0/0:23,0:23:69.23:0,69,1069	0/0:13,0:13:39.10:0,39,576
chr10	28590983	.	AGT	A	1945.60	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=10.414;DP=567;FS=7.951;HRun=0;HaplotypeScore=72.2777;InbreedingCoeff=0.9493;MQ=83.66;MQ0=0;MQRankSum=-2.708;QD=36.03;ReadPosRankSum=2.553;VQSLOD=5.5419;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,132,2541	0/0:4,0:4:9.03:0,9,174	0/0:18,0:18:54.17:0,54,975	0/0:18,0:18:45.13:0,45,805	0/0:7,0:7:18.06:0,18,346	0/0:24,0:24:72.25:0,72,1361	0/0:29,0:29:84.29:0,84,1604	0/0:17,0:17:51.17:0,51,985	0/0:23,0:23:69.24:0,69,1324	0/0:18,0:18:54.19:0,54,1041	0/0:5,0:5:15.05:0,15,290	0/0:27,0:27:78.27:0,78,1497	0/0:23,0:23:69.24:0,69,1310	0/0:27,0:27:81.28:0,81,1556	0/0:13,0:13:39.13:0,39,753	0/0:29,0:29:84.27:0,84,1590	1/1:2,33:35:84.29:1286,84,0	1/1:0,19:19:51.17:781,51,0	0/0:19,0:19:57.20:0,57,1095	0/0:10,0:10:27.09:0,27,522	0/0:43,0:43:99:0,117,2218	0/0:7,0:7:21.07:0,21,405	0/0:16,0:16:48.16:0,48,906	0/0:24,0:24:72.25:0,72,1390	0/0:17,0:17:48.16:0,48,927	0/0:16,0:16:48.16:0,48,928	0/0:29,0:29:87.30:0,87,1680	0/0:5,0:5:15.05:0,15,285
chr10	28592000	.	CGTGT	C	2351.77	PASS	AB=0.787;AC=39;AF=0.750;AN=52;BaseQRankSum=0.813;DP=566;FS=1.479;HRun=0;HaplotypeScore=109.7387;InbreedingCoeff=0.3435;MQ=69.63;MQ0=13;MQRankSum=2.228;QD=5.67;ReadPosRankSum=1.222;VQSLOD=2.3201;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:13,6:18:6.02:92,6,0	1/1:11,0:11:6.26:37,6,0	./.	./.	1/1:11,0:13:2.90:43,3,0	1/1:11,3:13:3.01:46,3,0	0/0:16,0:16:3:0,3,25	0/0:21,0:21:2.98:0,3,21	1/1:15,2:17:17.41:199,17,0	0/1:21,2:23:1.75:60,0,2	0/1:5,5:8:3.83:83,0,4	0/1:22,9:31:11.16:105,0,11	1/1:17,2:20:16.46:178,16,0	1/1:18,4:22:0.46:1,0,0	1/1:17,8:25:2.55:137,3,0	1/1:14,11:24:21.07:302,21,0	0/0:19,0:19:3.01:0,3,23	0/0:18,0:18:2.72:0,3,28	1/1:16,0:12:10.51:65,11,0	0/0:5,6:12:5.73:0,6,35	1/1:39,0:37:11.28:95,11,0	1/1:14,2:16:2.11:7,2,0	1/1:11,0:13:2.90:46,3,0	1/1:31,4:35:30.06:408,30,0	1/1:11,11:21:6.41:93,6,0	1/1:19,4:23:11.31:148,11,0	1/1:7,3:10:6.02:92,6,0	1/1:6,1:9:18.05:251,18,0
chr10	28592055	.	GTATATA	G	529.77	PASS	AB=0.900;AC=6;AF=0.107;AN=56;BaseQRankSum=7.171;DP=769;FS=53.759;HRun=0;HaplotypeScore=185.5377;InbreedingCoeff=0.2027;MQ=50.83;MQ0=32;MQRankSum=-3.950;QD=5.41;ReadPosRankSum=0.306;VQSLOD=0.8905;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:30:48.15:0,48,1043	0/1:12,0:12:22.80:23,0,625	0/0:33,0:13:39.04:0,39,838	0/0:35,0:7:12.53:0,13,421	0/0:21,0:18:36.12:0,36,825	0/0:17,0:16:39.13:0,39,985	0/0:23,0:21:35.50:0,36,801	0/0:45,0:44:99:0,119,2724	0/1:37,0:36:15.08:15,0,1941	0/0:38,0:37:84.82:0,85,2347	0/0:20,0:18:36.07:0,36,826	0/0:28,0:28:36.41:0,36,1199	0/1:19,0:18:92.95:93,0,583	0/0:22,0:22:54.18:0,54,1182	0/0:36,0:35:80.01:0,80,1717	0/0:38,0:37:13.78:0,14,1389	1/1:11,1:9:7.55:378,8,0	0/1:6,12:17:42.45:145,0,42	0/0:22,0:19:41.28:0,41,999	0/0:29,0:27:51.17:0,51,1247	0/0:47,1:46:87.95:0,88,2051	0/0:18,0:18:39.07:0,39,856	0/0:24,0:24:51.17:0,51,1193	0/0:41,0:41:25.37:0,25,1623	0/0:30,0:29:47.79:0,48,1061	0/0:36,0:36:62.11:0,62,2372	0/0:21,0:21:35.90:0,36,1104	0/0:11,0:10:19.02:0,19,247
chr10	28594482	.	C	CTCATAAG	3430.55	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-1.272;DP=600;FS=3.293;HRun=0;HaplotypeScore=136.8503;InbreedingCoeff=0.9975;MQ=82.39;MQ0=0;MQRankSum=-9.448;QD=90.28;ReadPosRankSum=-0.805;VQSLOD=4.4853;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,129,3316	0/0:11,0:11:33.11:0,33,857	0/0:19,0:19:43.03:0,43,1087	0/0:18,0:17:42.14:0,42,977	0/0:19,0:19:47.97:0,48,1183	0/0:14,0:14:42.14:0,42,1012	0/0:23,0:23:66.21:0,66,1583	0/0:24,0:24:63.21:0,63,1580	0/0:22,0:22:66.21:0,66,1586	0/0:26,0:26:72.23:0,72,1743	0/0:15,0:15:45.15:0,45,1138	0/0:21,0:21:63.20:0,63,1584	0/0:23,0:23:66.21:0,66,1646	0/0:27,0:27:78.25:0,78,1963	0/0:22,0:23:66.23:0,66,1695	0/0:21,0:21:60.21:0,60,1547	1/1:3,5:12:21.07:700,21,0	1/1:6,19:26:75.26:2731,75,0	0/0:19,0:19:54.18:0,54,1329	0/0:12,0:12:36.11:0,36,882	0/0:39,0:39:99:0,111,2867	0/0:17,0:17:48.15:0,48,1164	0/0:18,0:18:51.15:0,51,1175	0/0:30,0:30:84.27:0,84,2100	0/0:19,0:19:57.20:0,57,1445	0/0:22,0:22:60.18:0,60,1449	0/0:21,0:21:60.21:0,60,1552	0/0:12,0:12:33.11:0,33,816
chr10	28596500	.	AG	A	1409.91	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.823;DP=651;FS=4.534;HRun=5;HaplotypeScore=72.4483;InbreedingCoeff=0.9895;MQ=83.00;MQ0=0;MQRankSum=-0.575;QD=29.37;ReadPosRankSum=2.829;VQSLOD=4.4334;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,141,1892	0/0:14,0:14:39.13:0,39,532	0/0:22,0:22:56.89:0,57,694	0/0:22,0:22:50.09:0,50,656	0/0:28,0:28:72.23:0,72,965	0/0:18,0:18:54.18:0,54,736	0/0:25,0:25:69.22:0,69,928	0/0:28,0:28:66.21:0,66,884	0/0:13,0:13:39.13:0,39,532	0/0:22,0:22:63.20:0,63,847	0/0:6,0:6:15.05:0,15,205	0/0:28,0:28:84.24:0,84,1108	0/0:14,0:14:39.13:0,39,534	0/0:21,0:21:60.18:0,60,796	0/0:22,0:22:60.20:0,60,820	0/0:14,0:14:42.12:0,42,544	1/1:0,23:23:66.19:749,66,0	1/1:2,23:25:69.20:783,69,0	0/0:25,0:25:66.20:0,66,872	0/0:13,0:13:33.10:0,33,433	0/0:75,0:75:99:0,211,2800	0/0:16,0:16:48.16:0,48,656	0/0:17,0:17:42.14:0,42,574	0/0:29,0:29:81.27:0,81,1101	0/0:18,0:17:42.14:0,42,574	0/0:24,0:24:72.24:0,72,982	0/0:30,0:30:87.29:0,87,1188	0/0:10,0:10:21.06:0,21,271
chr10	28597892	.	ACACACACACATG	A	4485.40	PASS	AB=0.711;AC=27;AF=0.482;AN=56;BaseQRankSum=-6.156;DP=819;FS=21.826;HRun=0;HaplotypeScore=331.4561;InbreedingCoeff=-0.3405;MQ=59.21;MQ0=15;MQRankSum=2.644;QD=7.87;ReadPosRankSum=4.724;VQSLOD=2.0333;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:20,16:36:46.62:47,0,61	0/1:6,3:9:8.49:101,0,8	0/0:63,0:37:24.91:0,25,314	0/0:54,0:21:9.27:0,9,97	0/0:16,16:31:3.88:0,4,35	1/1:6,16:22:5.38:112,5,0	0/0:11,20:31:2.60:0,3,58	0/1:29,0:28:30.72:327,0,31	0/1:8,22:30:9.84:181,0,10	0/1:25,16:40:99:867,0,266	1/1:12,11:23:0.98:3,1,0	0/1:15,17:32:31.71:100,0,32	0/1:13,18:31:99:299,0,173	0/1:11,12:23:42.66:199,0,43	0/1:10,18:28:14.08:152,0,14	0/1:7,14:21:29.55:153,0,30	0/1:9,9:18:84.63:201,0,85	0/1:10,0:10:36.65:193,0,37	0/1:12,4:15:99:171,0,122	0/0:20,10:30:0.52:0,1,13	1/1:38,0:37:9.03:146,9,0	0/1:22,15:37:16.27:51,0,16	1/1:25,10:34:1.66:8,2,0	0/1:10,22:32:0.03:0,0,1	0/0:21,18:39:12.14:0,12,71	0/1:20,8:28:99:751,0,323	0/1:9,10:19:13.41:301,0,13	1/1:11,1:12:2.34:125,2,0
chr10	28597902	.	ATGC	A	562.66	PASS	AB=0.941;AC=17;AF=0.304;AN=56;BaseQRankSum=6.198;DP=781;FS=22.303;HRun=0;HaplotypeScore=300.7017;InbreedingCoeff=-0.4083;MQ=49.33;MQ0=19;MQRankSum=-6.553;QD=1.31;ReadPosRankSum=-1.241;VQSLOD=1.1123;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:28:13.12:0,13,376	0/1:7,2:9:21.08:21,0,71	0/0:46,0:24:54.18:0,54,1152	0/0:44,0:16:18.63:0,19,569	0/1:29,3:31:26.24:26,0,120	0/1:22,0:22:5.91:6,0,89	0/0:29,0:28:10.27:0,10,174	0/0:24,0:27:59.29:0,59,1023	0/1:29,0:29:26.27:26,0,29	0/1:40,5:43:99:215,0,958	0/1:23,1:23:0.99:1,0,114	0/1:32,0:32:9.15:9,0,161	0/1:26,1:28:54.29:75,0,54	0/1:19,1:20:40.28:40,0,120	0/1:26,0:26:3.84:4,0,223	0/1:20,0:21:7.44:7,0,140	0/1:18,0:18:22.45:22,0,361	0/0:9,0:10:25.20:0,25,320	0/0:18,0:17:47.43:0,47,827	0/1:24,4:29:27.64:28,0,94	0/0:38,0:37:30.63:0,31,699	0/0:31,3:36:0.04:0,0,188	0/1:23,14:37:48.58:49,0,125	0/0:30,0:29:10.46:0,10,270	0/0:33,4:38:7.27:0,7,145	0/1:22,2:25:99:144,0,500	0/1:16,0:16:34.92:35,0,72	0/1:14,0:14:1.27:1,0,332
chr10	28597904	.	G	GCA	2245.16	PASS	AB=0.987;AC=36;AF=0.643;AN=56;BaseQRankSum=-0.048;DP=790;FS=21.483;HRun=0;HaplotypeScore=318.3430;InbreedingCoeff=-0.0427;MQ=48.66;MQ0=19;MQRankSum=1.018;QD=3.32;ReadPosRankSum=-3.134;VQSLOD=1.0769;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:29:8.80:9,0,36	0/1:9,0:9:5.01:21,0,5	0/0:43,0:20:24.14:0,24,268	0/0:48,0:16:8.87:0,9,96	0/1:33,0:32:0.22:8,0,0	1/1:23,0:23:1.65:31,2,0	1/1:28,1:28:1.07:64,1,0	0/1:27,6:31:99:403,0,112	0/1:30,0:31:17.66:18,0,18	0/1:45,0:43:75.19:555,0,75	1/1:23,0:22:9.05:38,9,0	1/1:32,0:32:4.35:61,4,0	0/1:29,0:29:3.94:87,0,4	0/1:19,0:19:11.07:11,0,15	0/1:25,0:25:6.32:13,0,6	0/0:22,0:22:4.56:0,5,51	1/1:17,0:18:1.53:43,2,0	1/1:8,1:10:17.72:198,18,0	0/1:22,0:21:99:197,0,133	1/1:28,0:28:11.27:53,11,0	1/1:37,3:38:9.03:146,9,0	1/1:37,0:37:23.69:104,24,0	1/1:40,0:39:21.36:77,21,0	0/1:31,0:29:0:0,0,0	1/1:38,0:38:21.69:86,22,0	0/1:24,0:24:99:112,0,156	0/1:17,0:17:2.06:22,0,2	0/1:11,0:11:4.46:39,0,4
chr10	28597910	.	A	AG	981.48	PASS	AB=0.975;AC=26;AF=0.464;AN=56;BaseQRankSum=9.083;DP=780;FS=52.672;HRun=0;HaplotypeScore=350.4493;InbreedingCoeff=-0.3154;MQ=44.50;MQ0=21;MQRankSum=-4.994;QD=1.67;ReadPosRankSum=-2.890;VQSLOD=0.9832;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:10.39:0,10,130	0/1:9,0:9:9.75:10,0,17	0/0:35,0:14:17.89:0,18,400	0/0:39,0:10:20.49:0,20,244	1/1:34,0:33:2.36:8,2,0	0/1:24,0:24:0.88:1,0,6	0/1:31,0:30:15.72:16,0,166	0/1:37,2:35:56.13:56,0,634	0/1:31,0:31:5.45:38,0,5	0/1:48,2:48:99:199,0,428	0/1:27,0:26:10.59:11,0,32	1/1:29,1:30:5.03:91,5,0	0/1:30,0:30:40.19:127,0,40	0/1:19,0:19:20.84:69,0,21	0/1:24,0:24:4.27:4,0,65	0/0:21,0:21:2.63:0,3,83	0/1:13,3:15:41.94:75,0,42	0/1:8,1:9:19.81:20,0,127	0/1:19,1:18:27.64:28,0,434	1/1:28,0:28:11.19:50,11,0	0/0:37,0:34:2.75:0,3,95	0/1:38,0:38:22.48:22,0,48	0/1:41,0:41:3.60:4,0,6	0/0:30,0:28:5.60:0,6,60	0/1:39,0:39:7.52:8,0,20	0/1:22,1:23:99:184,0,276	0/1:16,0:16:8.89:9,0,14	1/1:9,0:9:0.15:103,0,0
chr10	28597912	.	A	AG	275.71	PASS	AB=0.953;AC=19;AF=0.339;AN=56;BaseQRankSum=8.307;DP=766;FS=33.107;HRun=0;HaplotypeScore=327.2833;InbreedingCoeff=-0.0803;MQ=43.36;MQ0=21;MQRankSum=-2.542;QD=0.60;ReadPosRankSum=-4.301;VQSLOD=0.8293;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:10.39:0,10,129	0/1:8,0:8:13.40:13,0,16	0/0:31,0:13:3.35:0,3,311	0/0:34,0:8:15.88:0,16,182	0/1:32,3:34:0.13:4,0,0	0/1:23,1:24:1.36:1,0,5	0/1:28,2:29:8.65:9,0,123	0/0:43,0:37:65.49:0,65,752	0/1:33,0:33:4.31:30,0,4	0/1:40,6:44:64.99:65,0,468	0/1:24,2:25:6.13:6,0,40	0/1:28,2:30:4.19:35,0,4	0/1:25,4:29:62.27:68,0,62	0/1:18,2:20:8.79:9,0,19	0/1:23,0:23:10.43:10,0,45	0/0:20,1:21:12.45:0,12,128	0/0:16,0:15:5.95:0,6,92	0/0:9,0:9:7.59:0,8,130	0/0:18,0:16:39.22:0,39,455	1/1:25,4:29:12.52:57,13,0	0/0:36,0:33:3.64:0,4,95	0/1:37,0:37:28.42:28,0,28	0/0:40,1:40:2.42:0,2,10	0/1:28,0:26:0.38:0,0,0	0/1:38,0:38:12.53:13,0,21	0/0:24,0:24:15.92:0,16,361	0/1:16,1:17:15.64:16,0,16	1/1:5,4:9:1.99:57,2,0
chr10	28597914	.	ATG	A	1052.69	PASS	AB=0.935;AC=33;AF=0.589;AN=56;BaseQRankSum=0.878;DP=750;FS=36.517;HRun=0;HaplotypeScore=316.6871;InbreedingCoeff=-0.0978;MQ=41.34;MQ0=20;MQRankSum=-0.746;QD=1.72;ReadPosRankSum=3.618;VQSLOD=1.4766;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:28:1.90:2,0,48	1/1:6,2:8:2.59:59,3,0	0/1:24,4:11:6.19:6,0,309	0/0:26,3:4:8.99:0,9,98	1/1:27,5:34:0.29:2,0,0	0/1:23,1:25:7.71:8,0,10	0/0:28,0:29:2.38:0,2,91	0/0:39,2:35:6.96:0,7,695	0/1:35,0:35:3.13:3,0,13	0/1:29,9:42:84.17:448,0,84	0/1:21,4:26:4.79:5,0,63	1/1:26,0:28:7.05:46,7,0	1/1:25,1:30:1.79:67,2,0	1/1:17,1:20:10.86:73,11,0	0/1:23,0:23:7.77:8,0,26	0/1:19,0:20:0.63:1,0,72	0/1:16,0:15:17.73:18,0,76	0/1:8,1:9:15.09:15,0,144	0/1:18,0:16:7.99:8,0,299	1/1:21,4:29:1.04:21,1,0	1/1:31,2:30:3.52:46,4,0	0/0:31,6:37:16.96:0,17,86	1/1:22,18:40:9.55:43,10,0	0/1:29,0:27:0.02:0,0,0	0/1:33,5:38:21:62,0,21	0/1:20,3:23:76.64:184,0,77	1/1:14,1:16:2.01:49,2,0	0/1:3,2:9:13.15:24,0,13
chr10	28597916	.	GCA	G	239.39	PASS	AB=0.991;AC=14;AF=0.259;AN=54;BaseQRankSum=-0.005;DP=769;FS=19.865;HRun=0;HaplotypeScore=331.5451;InbreedingCoeff=-0.1340;MQ=41.11;MQ0=18;MQRankSum=0.115;QD=0.78;ReadPosRankSum=5.887;VQSLOD=0.9654;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:28:7.13:7,0,15	0/1:8,0:8:13.70:14,0,17	0/0:25,0:11:11.97:0,12,160	./.	0/0:36,0:35:0.44:0,0,1	0/0:26,0:26:4.07:0,4,29	0/0:30,0:29:16.68:0,17,186	0/0:42,0:36:71.96:0,72,833	0/0:37,1:38:3.16:0,3,38	0/1:46,0:44:99:135,0,249	0/0:29,0:28:8.22:0,8,86	0/0:30,0:30:9.87:0,10,96	0/0:32,0:32:10.48:0,10,179	0/1:21,0:21:3.69:4,0,36	0/1:24,0:24:4.11:4,0,58	0/0:20,1:21:1.53:0,2,68	0/1:16,0:15:15.95:16,0,58	0/1:9,1:10:35.97:36,0,116	0/0:16,0:15:27.19:0,27,298	0/0:30,0:30:1.17:0,1,25	1/1:28,3:27:1.35:6,1,0	0/0:39,0:39:27.72:0,28,141	0/1:42,1:42:3.57:8,0,4	0/1:32,0:30:0:0,0,0	0/0:39,0:39:15.27:0,15,115	0/1:23,0:23:99:111,0,103	0/1:17,0:17:19.26:22,0,19	0/1:9,0:9:4.60:5,0,29
chr10	28597924	.	A	AG	1454.44	PASS	AB=0.871;AC=26;AF=0.464;AN=56;BaseQRankSum=5.398;DP=816;FS=44.222;HRun=0;HaplotypeScore=373.8571;InbreedingCoeff=-0.6060;MQ=35.32;MQ0=15;MQRankSum=-3.854;QD=2.00;ReadPosRankSum=-2.211;VQSLOD=1.5821;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:29:27.60:28,0,58	0/1:9,1:10:31.44:31,0,58	0/0:17,0:5:12.04:0,12,163	0/0:18,0:3:2.95:0,3,41	0/1:33,1:37:0.21:0,0,29	0/1:27,0:27:4.29:4,0,25	0/1:29,1:31:50.83:51,0,108	0/1:38,9:42:99:418,0,781	0/1:39,3:39:41.50:41,0,81	0/1:38,3:46:99:123,0,454	0/1:25,3:29:4.48:4,0,47	0/1:26,4:33:12.69:134,0,13	0/1:29,3:34:99:142,0,197	0/1:21,3:25:44.55:45,0,88	0/1:26,1:26:42.28:56,0,42	0/1:21,2:24:14.37:14,0,41	0/1:14,0:16:18.19:18,0,85	0/0:9,0:10:7.95:0,8,199	0/1:10,3:14:93.48:93,0,261	0/1:27,6:36:27.73:67,0,28	1/1:31,1:28:2.29:31,2,0	0/1:35,4:39:43.81:83,0,44	0/0:40,2:42:6.64:0,7,23	1/1:33,1:31:0.08:1,0,0	0/1:37,5:42:63.12:86,0,63	0/1:19,5:24:99:109,0,375	0/1:17,0:19:12.34:12,0,42	0/1:11,0:13:6.20:6,0,106
chr10	28597928	.	ATGC	A	582.05	PASS	AB=0.901;AC=17;AF=0.304;AN=56;BaseQRankSum=6.092;DP=823;FS=0.000;HRun=0;HaplotypeScore=352.0833;InbreedingCoeff=-0.1603;MQ=34.83;MQ0=15;MQRankSum=-3.488;QD=1.24;ReadPosRankSum=-3.747;VQSLOD=0.9230;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:6.18:0,6,111	0/1:9,1:10:15.36:15,0,71	0/0:9,0:4:5.72:0,6,128	0/1:9,0:3:7.12:7,0,139	1/1:34,5:38:20.23:70,20,0	0/1:25,3:26:17.55:18,0,103	0/0:30,0:29:19:0,19,266	0/0:54,0:46:99:0,131,2485	0/0:38,1:36:15.57:0,16,249	0/1:50,2:50:89.89:90,0,1191	0/1:28,3:30:43.19:43,0,70	0/0:34,1:33:21.15:0,21,363	0/1:34,2:33:55.20:55,0,437	0/0:26,0:26:20.14:0,20,206	0/0:29,0:27:12.50:0,13,173	0/0:24,1:25:19.29:0,19,218	0/0:16,0:14:5.98:0,6,214	0/0:8,0:9:6.45:0,6,194	0/0:16,0:14:6.98:0,7,485	0/1:34,3:37:32.09:32,0,89	0/0:32,0:28:4.78:0,5,44	0/1:31,8:39:55.42:55,0,109	0/1:40,4:43:9.05:59,0,9	1/1:34,0:32:5.16:14,5,0	0/1:38,5:43:9.72:10,0,63	0/1:22,4:25:99:142,0,709	0/1:18,1:19:10.89:11,0,231	0/1:14,2:16:99:120,0,267
chr10	28597936	.	A	ACACG	2080.05	PASS	AB=0.986;AC=26;AF=0.464;AN=56;BaseQRankSum=6.277;DP=797;FS=21.854;HRun=0;HaplotypeScore=362.7521;InbreedingCoeff=-0.5373;MQ=33.17;MQ0=14;MQRankSum=-3.552;QD=3.06;ReadPosRankSum=1.760;VQSLOD=0.7171;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:22:0.68:5,1,0	0/1:10,0:10:49.78:50,0,72	0/0:6,0:1:2.90:0,3,16	0/0:5,0:3:8.24:0,8,121	1/1:38,0:37:1.76:16,2,0	0/1:24,0:22:15.16:15,0,71	0/1:28,1:28:96.77:106,0,97	0/1:56,1:52:99:173,0,1385	0/1:39,0:36:99:106,0,169	0/1:53,0:52:99:230,0,655	0/0:30,0:29:10.09:0,10,88	0/1:37,0:34:99:177,0,147	0/1:36,0:32:99:240,0,297	0/1:25,0:25:58.18:58,0,217	0/1:29,0:27:47.65:48,0,132	0/1:22,0:22:21.87:22,0,161	0/1:16,0:12:27.84:28,0,169	0/1:8,0:8:23.58:24,0,120	0/1:18,0:15:65.09:65,0,266	0/1:33,2:35:51.92:73,0,52	0/0:30,0:26:8.95:0,9,59	0/1:37,0:37:49.85:130,0,50	0/0:43,1:43:11.61:0,12,54	0/1:33,0:29:0.04:1,0,0	1/1:42,1:43:0.37:261,0,0	0/1:26,1:27:99:307,0,497	0/1:18,0:18:39.65:40,0,137	0/1:17,0:17:53.86:54,0,217
chr10	28597940	.	ATG	A	2324.37	PASS	AB=0.828;AC=22;AF=0.393;AN=56;BaseQRankSum=8.712;DP=760;FS=13.378;HRun=0;HaplotypeScore=337.4379;InbreedingCoeff=-0.2649;MQ=33.39;MQ0=13;MQRankSum=-4.122;QD=4.23;ReadPosRankSum=4.043;VQSLOD=1.2271;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:19:0.23:0,0,9	0/1:6,4:10:69.11:72,0,69	0/0:11,0:4:11.40:0,11,145	0/0:6,0:3:7.84:0,8,127	1/1:22,13:34:10.37:48,10,0	0/1:19,4:21:58.70:59,0,62	0/1:31,0:32:5.43:5,0,143	0/0:57,0:50:86.17:0,86,1702	0/1:36,2:34:0.50:0,0,187	0/1:32,18:49:99:877,0,464	0/1:20,8:27:19.72:20,0,61	0/1:29,2:30:52.14:52,0,159	0/1:27,4:27:67.58:68,0,337	0/1:26,1:26:24.86:25,0,206	0/0:27,1:26:3.29:0,3,122	0/0:17,2:19:21.33:0,21,186	0/1:11,0:9:27.85:28,0,32	0/0:7,0:7:8.44:0,8,119	0/1:14,0:12:43.22:43,0,295	0/1:19,14:33:39.22:61,0,39	0/0:30,0:25:10.16:0,10,45	0/1:19,15:34:31.11:84,0,31	1/1:17,25:42:34.43:240,34,0	0/0:31,1:28:0.62:0,1,1	1/1:29,13:42:4.44:150,4,0	0/1:22,8:29:99:360,0,363	0/1:13,3:16:68.83:69,0,69	0/1:9,8:17:99:222,0,170
chr10	28597942	.	GCA	G	409.22	PASS	AB=0.990;AC=20;AF=0.357;AN=56;BaseQRankSum=7.636;DP=782;FS=0.000;HRun=0;HaplotypeScore=347.3259;InbreedingCoeff=-0.3565;MQ=33.16;MQ0=13;MQRankSum=-2.247;QD=0.72;ReadPosRankSum=4.296;VQSLOD=1.0282;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:20,1:20:2.94:19,3,0	0/1:11,0:11:25.93:26,0,117	0/0:13,0:5:15.04:0,15,215	0/0:7,0:3:8.99:0,9,121	0/0:36,1:36:4.31:0,4,21	0/1:23,0:21:0.16:0,0,63	0/1:32,0:32:9.32:9,0,112	0/0:56,1:50:45.75:0,46,1137	0/1:36,2:34:42.25:42,0,155	0/1:52,0:50:99:100,0,467	0/0:29,0:29:1.27:0,1,68	0/1:28,2:27:28.52:29,0,150	0/1:31,0:27:26.34:26,0,297	0/1:27,1:27:3.74:4,0,193	0/1:28,0:26:31.74:32,0,101	0/1:19,0:19:2.66:3,0,127	0/0:13,0:9:3.72:0,4,61	0/0:7,0:7:11.15:0,11,54	0/0:16,0:13:20.51:0,21,335	0/1:37,0:37:24.37:24,0,44	0/1:29,1:25:27.74:28,0,41	0/1:36,0:36:41.04:41,0,48	0/1:45,0:44:2.66:19,0,3	0/0:30,1:27:0.89:0,1,2	0/1:43,0:43:13.62:59,0,14	0/1:34,0:33:85.48:85,0,469	0/1:17,0:17:4.35:4,0,156	0/1:17,0:17:0.70:1,0,201
chr10	28597950	.	A	AG	295.18	PASS	AB=0.933;AC=12;AF=0.214;AN=56;BaseQRankSum=2.221;DP=759;FS=10.236;HRun=0;HaplotypeScore=338.5284;InbreedingCoeff=-0.1639;MQ=32.70;MQ0=11;MQRankSum=-4.074;QD=0.90;ReadPosRankSum=-7.306;VQSLOD=-0.1062;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:16,1:16:5.40:43,0,5	0/0:11,0:11:16.05:0,16,154	0/0:17,0:7:21.07:0,21,282	0/0:8,0:3:9:0,9,106	0/0:39,1:39:0.54:0,1,22	0/0:23,0:21:6.58:0,7,114	0/1:26,2:28:62.36:62,0,156	0/1:45,5:44:95.52:96,0,1113	0/1:36,1:33:44.24:44,0,277	0/0:49,1:49:40.55:0,41,1100	0/0:27,0:27:5.57:0,6,104	0/1:26,3:26:27.34:27,0,309	0/1:30,2:28:2.24:2,0,391	0/0:27,2:27:24.07:0,24,298	0/1:23,2:23:30.52:31,0,105	0/1:16,1:17:27.82:28,0,171	0/0:14,0:10:8.87:0,9,102	0/0:8,0:8:2.70:0,3,119	0/0:16,0:13:31.41:0,31,375	0/1:36,0:36:10.65:11,0,61	0/1:23,4:24:32.30:86,0,32	0/0:34,0:34:10.71:0,11,91	0/0:47,0:46:22.65:0,23,112	1/1:29,0:26:0.07:1,0,0	0/0:39,1:40:25.93:0,26,154	0/0:33,0:32:20.28:0,20,741	0/0:15,1:16:27.27:0,27,280	0/0:17,0:17:33.81:0,34,355
chr10	28597958	.	ACACACG	A	416.31	PASS	AB=0.976;AC=16;AF=0.286;AN=56;BaseQRankSum=5.348;DP=687;FS=3.829;HRun=0;HaplotypeScore=326.0014;InbreedingCoeff=-0.2097;MQ=32.80;MQ0=9;MQRankSum=-1.691;QD=1.15;ReadPosRankSum=-1.605;VQSLOD=1.5043;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:14:0.85:23,1,0	0/0:10,0:10:9.96:0,10,225	0/0:17,0:7:21.07:0,21,612	0/0:8,0:3:9.01:0,9,234	1/1:36,1:36:0.97:4,1,0	0/0:20,0:18:11.24:0,11,131	0/1:19,2:21:27.74:28,0,255	0/1:38,1:33:99:131,0,1460	0/1:30,3:29:60.81:61,0,481	0/0:46,0:45:35.06:0,35,1459	0/1:24,0:24:0.14:0,0,101	0/1:28,0:25:73.77:74,0,162	0/0:31,0:27:0.32:0,0,507	0/0:26,0:24:24.12:0,24,363	0/1:21,0:19:19.56:20,0,184	0/1:17,0:16:19.80:20,0,118	0/1:13,0:9:8.37:8,0,24	0/0:8,0:8:6.72:0,7,122	0/1:16,1:14:85.23:85,0,617	0/0:32,0:32:1.77:0,2,40	0/1:23,1:22:20.10:20,0,98	0/0:33,0:33:6.41:0,6,109	0/1:43,0:43:2.20:2,0,29	0/0:22,2:21:0.89:0,1,3	0/0:36,0:36:6.38:0,6,30	0/1:31,0:30:78.10:78,0,877	0/0:16,0:16:4.28:0,4,136	0/0:17,0:17:19.67:0,20,466
chr10	28597962	.	ACG	A	520.01	PASS	AB=0.972;AC=24;AF=0.429;AN=56;BaseQRankSum=9.183;DP=651;FS=6.333;HRun=0;HaplotypeScore=295.2010;InbreedingCoeff=-0.2225;MQ=33.04;MQ0=5;MQRankSum=-4.069;QD=1.03;ReadPosRankSum=-0.793;VQSLOD=0.8901;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:12:1.19:8,1,0	0/1:10,0:10:0.36:0,0,120	0/0:17,0:7:21:0,21,345	0/0:8,0:3:8.82:0,9,129	1/1:35,0:34:9.65:41,10,0	0/0:20,0:18:6.35:0,6,76	0/0:19,0:19:1.80:0,2,158	0/0:32,0:30:16.47:0,16,833	0/1:33,0:29:25.06:25,0,311	0/1:44,0:43:2.04:2,0,697	0/1:24,0:24:20.44:20,0,48	0/1:27,0:25:91.49:91,0,97	0/1:30,0:26:46.25:46,0,289	0/1:24,0:22:7:7,0,209	0/1:19,0:17:0.78:1,0,110	0/1:16,0:15:7.56:8,0,69	0/1:10,2:9:1.34:15,0,1	0/1:3,4:7:42.79:99,0,43	0/1:15,0:13:24.90:25,0,347	0/1:32,0:32:2.33:42,0,2	0/1:21,0:19:6:6,0,52	0/1:32,0:32:33.22:33,0,44	1/1:43,0:43:9.83:67,10,0	0/0:23,0:20:0.75:0,1,2	0/1:36,0:36:3.20:61,0,3	0/0:28,0:28:8.06:0,8,507	0/1:14,0:14:37.07:37,0,56	0/1:17,0:17:32.73:33,0,195
chr10	28597968	.	A	AT	118.77	PASS	AB=0.862;AC=23;AF=0.411;AN=56;BaseQRankSum=7.540;DP=390;FS=4.504;HRun=0;HaplotypeScore=163.4598;InbreedingCoeff=0.0984;MQ=35.85;MQ0=5;MQRankSum=-2.395;QD=0.56;ReadPosRankSum=-7.101;VQSLOD=0.2608;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:9,0:8:1.36:3,1,0	0/0:3,0:3:5.87:0,6,83	0/0:17,0:7:21.07:0,21,283	0/0:8,0:3:8.92:0,9,100	1/1:16,1:17:0.34:1,0,0	0/1:14,2:14:0.76:1,0,34	0/0:16,1:17:7.66:0,8,122	0/0:18,0:17:45.06:0,45,588	0/0:24,2:24:19.45:0,19,281	0/1:16,3:19:38.12:38,0,362	0/1:12,1:13:10.33:10,0,35	0/1:11,4:15:45.45:45,0,62	0/0:16,2:17:14.84:0,15,310	0/0:17,1:17:7.91:0,8,123	0/0:11,2:12:6.28:0,6,94	0/1:9,2:10:12.08:12,0,34	1/1:7,0:8:1.55:4,2,0	0/1:6,0:7:2.75:3,0,95	0/0:10,0:9:23.93:0,24,286	1/1:8,1:9:2.29:5,2,0	0/0:16,0:14:2.86:0,3,41	0/1:16,0:16:0.01:0,0,33	1/1:13,1:14:1.37:4,1,0	1/1:18,0:16:0.48:1,0,0	1/1:20,0:20:5.37:21,5,0	0/0:14,0:14:32.62:0,33,390	0/1:5,3:8:21.43:21,0,32	0/1:6,4:10:82.73:83,0,106
chr10	28598272	.	GA	G	907.52	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.170;DP=514;FS=6.926;HRun=5;HaplotypeScore=78.6501;InbreedingCoeff=0.9929;MQ=90.88;MQ0=0;MQRankSum=-2.284;QD=26.69;ReadPosRankSum=2.207;VQSLOD=3.6155;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:75.25:0,75,1024	0/0:8,0:8:21.06:0,21,270	0/0:26,0:26:47.75:0,48,789	0/0:25,0:25:36.35:0,36,739	0/0:19,0:19:30.10:0,30,410	0/0:20,0:20:27.05:0,27,344	0/0:16,0:16:45.13:0,45,598	0/0:11,0:11:33.10:0,33,438	0/0:19,0:19:33.11:0,33,451	0/0:24,0:24:66.17:0,66,882	0/0:18,0:18:36.12:0,36,492	0/0:21,0:21:33.07:0,33,430	0/0:17,0:17:39.09:0,39,512	0/0:19,0:19:45.15:0,45,603	0/0:23,0:23:39.13:0,39,533	0/0:13,0:13:27.08:0,27,349	1/1:0,15:15:42.12:478,42,0	1/1:0,19:19:48.14:551,48,0	0/0:15,0:15:39.10:0,39,526	0/0:14,0:14:24.08:0,24,339	0/0:20,0:20:51.17:0,51,692	0/0:12,0:12:30.10:0,30,410	0/0:10,0:10:27.09:0,27,368	0/0:32,0:32:81.23:0,81,1086	0/0:13,0:13:24.08:0,24,328	0/0:12,0:12:36.12:0,36,492	0/0:25,0:25:48.16:0,48,656	0/0:14,0:14:36.12:0,36,492
chr10	28598302	.	C	CGTTTGTTTGTTTGTTT	25788.87	PASS	AB=1.000;AC=51;AF=0.911;AN=56;BaseQRankSum=-3.875;DP=575;FS=4.172;HRun=0;HaplotypeScore=199.2155;InbreedingCoeff=0.7016;MQ=62.41;MQ0=3;MQRankSum=-2.923;QD=49.31;ReadPosRankSum=1.237;VQSLOD=3.9507;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:23,7:34:32.58:1318,33,0	1/1:7,0:7:9.03:396,9,0	0/0:28,0:24:14.83:0,15,395	0/0:24,0:18:21.02:0,21,302	1/1:10,6:17:14.76:903,15,0	1/1:12,14:29:33.07:1708,33,0	1/1:20,0:20:36.02:1665,36,0	1/1:27,0:26:33.95:898,34,0	1/1:11,10:23:24.55:1327,25,0	1/1:13,10:25:42.53:1463,43,0	1/1:8,7:19:18.06:702,18,0	1/1:11,9:21:21.07:1266,21,0	1/1:11,0:16:21.07:1086,21,0	1/1:12,6:19:15.52:1134,16,0	1/1:9,13:24:15.05:988,15,0	1/1:7,7:15:12.04:670,12,0	1/1:18,0:18:14.37:215,14,0	0/1:20,0:19:12.95:56,0,13	1/1:16,3:20:36.06:1050,36,0	1/1:6,10:17:18.06:899,18,0	1/1:25,0:25:35.88:896,36,0	1/1:10,3:14:18.06:877,18,0	1/1:10,1:11:23.94:536,24,0	1/1:29,0:29:42.40:1503,42,0	1/1:7,6:14:12.04:719,12,0	1/1:7,7:15:33.11:1217,33,0	1/1:16,12:29:30.57:1784,31,0	1/1:12,0:12:15.05:510,15,0
chr10	28598334	.	T	TG	497.29	PASS	AB=0.806;AC=8;AF=0.143;AN=56;BaseQRankSum=6.994;DP=503;FS=11.458;HRun=0;HaplotypeScore=93.7750;InbreedingCoeff=-0.1621;MQ=57.03;MQ0=4;MQRankSum=-7.443;QD=3.21;ReadPosRankSum=-2.052;VQSLOD=1.4755;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:31.75:0,32,640	0/1:5,2:7:19.04:19,0,191	0/0:26,0:17:44.97:0,45,567	0/0:22,0:20:60.13:0,60,764	0/0:15,0:15:26.03:0,26,449	0/0:26,0:26:25.92:0,26,524	0/1:17,8:25:99:139,0,607	0/1:21,5:25:65.06:65,0,647	0/0:16,0:16:30.50:0,31,492	0/0:21,0:21:48.31:0,48,677	0/0:18,0:18:36.17:0,36,465	0/0:12,0:12:24.62:0,25,378	0/0:17,0:16:39.13:0,39,543	0/0:11,0:11:7.06:0,7,233	0/0:13,0:13:15.67:0,16,305	0/0:11,0:11:15.49:0,15,284	0/0:20,0:20:19.52:0,20,621	0/1:18,1:18:0.45:0,0,436	0/0:23,0:22:54.18:0,54,697	0/0:13,0:13:22.02:0,22,345	0/1:20,4:24:99:168,0,345	0/0:14,0:14:36.03:0,36,524	0/1:15,6:21:99:134,0,445	0/1:19,7:26:71.07:71,0,528	0/0:9,0:9:12.80:0,13,228	0/0:13,0:13:26.97:0,27,385	0/0:22,0:21:48.97:0,49,779	0/1:4,3:7:30.47:30,0,152
chr10	28598479	.	TAAC	T	1924.49	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.339;DP=618;FS=4.657;HRun=0;HaplotypeScore=86.3471;InbreedingCoeff=0.9107;MQ=76.23;MQ0=0;MQRankSum=-2.317;QD=35.64;ReadPosRankSum=3.123;VQSLOD=4.4699;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,105,2115	0/0:5,0:5:15.05:0,15,345	0/0:18,0:18:38.12:0,38,722	0/0:10,0:10:27.03:0,27,451	0/0:19,0:19:51.11:0,51,1026	0/0:29,0:28:84.25:0,84,1774	0/0:25,0:25:75.26:0,75,1708	0/0:34,0:34:98.79:0,99,2012	0/0:21,0:21:63.16:0,63,1398	0/0:34,0:34:93.24:0,93,1883	0/0:26,0:26:69.24:0,69,1588	0/0:19,0:19:57.14:0,57,1261	0/0:11,0:11:30.10:0,30,690	0/0:24,0:24:60.21:0,60,1367	0/0:21,0:21:63.20:0,63,1380	0/0:19,0:19:54.17:0,54,1196	1/1:1,32:33:9.17:1205,9,0	1/1:0,21:21:51.11:833,51,0	0/0:24,0:24:72.21:0,72,1509	0/0:18,0:18:54.17:0,54,1142	0/0:24,0:24:72.23:0,72,1593	0/0:22,0:22:57.18:0,57,1266	0/0:17,0:17:51.07:0,51,1057	0/0:31,0:31:90.21:0,90,1842	0/0:19,0:19:57.20:0,57,1299	0/0:21,0:21:60.12:0,60,1201	0/0:33,0:33:93.26:0,93,1931	0/0:2,0:2:6.02:0,6,138
chr10	28599433	.	G	GAAAA	453.40	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=3.567;DP=473;FS=0.000;HRun=12;HaplotypeScore=83.7975;InbreedingCoeff=0.8465;MQ=55.52;MQ0=2;MQRankSum=-4.764;QD=11.06;ReadPosRankSum=-2.372;VQSLOD=-0.5456;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:36:48.99:0,49,732	0/0:10,0:10:20.91:0,21,242	0/0:6,0:6:12.77:0,13,110	0/0:7,0:6:14.15:0,14,136	0/0:26,0:27:49.52:0,50,635	0/0:12,0:12:20.47:0,20,234	0/0:21,0:21:55.91:0,56,666	0/0:25,0:27:54.56:0,55,581	0/0:8,0:6:13.74:0,14,146	0/0:9,0:9:17.88:0,18,224	0/0:13,0:15:26.95:0,27,306	0/0:18,0:18:38.82:0,39,474	0/0:11,0:11:24.03:0,24,306	0/0:8,0:8:18.02:0,18,237	0/0:16,0:16:32.96:0,33,373	0/0:16,0:16:13.16:0,13,216	1/1:7,18:27:13.29:222,13,0	1/1:13,0:14:25.94:347,26,0	0/0:18,0:19:38.94:0,39,498	0/0:17,0:20:33.62:0,34,380	0/0:11,0:11:17.21:0,17,213	0/0:17,0:17:29.89:0,30,323	0/0:13,0:15:32.82:0,33,352	0/0:23,0:23:56.22:0,56,685	0/0:20,0:21:49.24:0,49,594	0/0:22,0:23:52.27:0,52,649	0/0:24,0:23:45.16:0,45,527	0/0:9,0:7:2.80:0,3,39
chr10	28599523	.	AACACACAC	A	6943.50	PASS	AB=0.819;AC=43;AF=0.796;AN=54;BaseQRankSum=-1.575;DP=500;FS=0.763;HRun=0;HaplotypeScore=134.0076;InbreedingCoeff=0.3667;MQ=64.53;MQ0=9;MQRankSum=-5.215;QD=17.32;ReadPosRankSum=-1.021;VQSLOD=4.0198;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:15,7:22:6.02:127,6,0	1/1:7,2:10:9.03:207,9,0	./.	0/0:23,0:13:3.01:0,3,72	1/1:10,9:21:14.92:168,15,0	1/1:3,12:15:27.09:681,27,0	1/1:12,12:25:24.06:432,24,0	0/1:18,1:18:65.58:107,0,66	1/1:7,3:10:9.03:227,9,0	0/1:15,3:18:43.08:129,0,43	1/1:6,6:12:10.39:210,10,0	1/1:11,11:24:6.60:489,7,0	0/1:7,8:15:37.12:315,0,37	1/1:4,6:9:9.03:200,9,0	1/1:6,9:15:27.09:681,27,0	1/1:8,13:21:26.98:664,27,0	0/0:23,0:31:44.98:0,45,472	0/0:16,0:24:24.01:0,24,250	1/1:13,0:13:9.03:145,9,0	0/1:6,8:14:1.91:387,0,2	0/1:26,0:25:0:0,0,0	1/1:8,4:12:12:247,12,0	1/1:10,6:18:17.09:296,17,0	1/1:13,9:23:9:183,9,0	1/1:10,5:15:3.01:72,3,0	1/1:11,5:16:18.06:393,18,0	1/1:10,8:21:14.94:279,15,0	1/1:0,4:4:12.04:303,12,0
chr10	28599890	.	A	AGG	2180.07	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.007;DP=630;FS=4.033;HRun=8;HaplotypeScore=87.5491;InbreedingCoeff=0.9844;MQ=84.23;MQ0=0;MQRankSum=-1.206;QD=32.06;ReadPosRankSum=2.297;VQSLOD=3.9250;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,99,1092	0/0:7,0:7:15.03:0,15,167	0/0:27,0:27:63.09:0,63,666	0/0:28,0:26:66.10:0,66,695	0/0:24,0:24:63.15:0,63,691	0/0:11,0:11:30.06:0,30,324	0/0:30,0:30:60.11:0,60,659	0/0:17,0:17:25.55:0,26,271	0/0:31,0:31:78.18:0,78,859	0/0:21,0:21:45.09:0,45,493	0/0:15,0:15:30.06:0,30,333	0/0:20,0:20:54.11:0,54,592	0/0:20,0:20:42.08:0,42,467	0/0:17,0:17:42.10:0,42,467	0/0:15,0:15:42.11:0,42,468	0/0:20,0:20:51.13:0,51,569	1/1:13,26:42:99:1466,104,0	1/1:4,18:26:58.66:835,59,0	0/0:33,0:33:84.19:0,84,928	0/0:22,0:22:39.06:0,39,424	0/0:33,0:33:81.18:0,81,900	0/0:28,0:28:72.18:0,72,801	0/0:15,0:15:21.01:0,21,225	0/0:23,0:23:63.17:0,63,702	0/0:15,0:15:45.12:0,45,501	0/0:27,0:27:60.14:0,60,668	0/0:20,0:20:51.13:0,51,569	0/0:6,0:6:18.05:0,18,201
chr10	28600329	.	A	AGTGTGT	9114.04	PASS	AB=1.000;AC=49;AF=0.942;AN=52;BaseQRankSum=-2.733;DP=680;FS=10.414;HRun=0;HaplotypeScore=170.9015;InbreedingCoeff=-0.0882;MQ=48.28;MQ0=21;MQRankSum=-0.316;QD=14.33;ReadPosRankSum=0.947;VQSLOD=3.6014;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:29:2.90:58,3,0	1/1:9,1:10:9.50:231,10,0	./.	./.	1/1:16,6:25:2.76:96,3,0	1/1:19,2:24:30.10:696,30,0	0/1:17,0:16:45.86:204,0,46	0/1:34,0:30:11.42:186,0,11	1/1:13,8:23:3.01:97,3,0	1/1:23,6:31:30.57:743,31,0	1/1:17,1:19:11.64:238,12,0	1/1:13,10:26:14.94:483,15,0	1/1:16,3:15:12.68:592,13,0	1/1:15,1:15:15.03:300,15,0	1/1:15,5:22:9.03:288,9,0	1/1:16,11:29:21.07:560,21,0	1/1:14,0:17:13.51:57,14,0	0/1:17,0:17:12.22:12,0,28	1/1:20,1:18:12.93:245,13,0	1/1:24,6:30:9.03:289,9,0	1/1:45,0:44:21.04:378,21,0	1/1:19,2:21:7.99:358,8,0	1/1:12,0:26:2.74:38,3,0	1/1:19,2:25:17.02:342,17,0	1/1:16,5:25:18.06:552,18,0	1/1:31,2:33:51.56:987,52,0	1/1:18,10:29:33.07:820,33,0	1/1:13,1:14:9.03:266,9,0
chr10	28600398	.	T	TTGTA	1733.06	PASS	AB=0.625;AC=3;AF=0.054;AN=56;BaseQRankSum=-2.355;DP=748;FS=2.461;HRun=0;HaplotypeScore=179.3791;InbreedingCoeff=0.6432;MQ=58.47;MQ0=8;MQRankSum=-6.452;QD=39.39;ReadPosRankSum=2.126;VQSLOD=3.8988;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:84.29:0,84,1500	0/0:13,0:13:36.12:0,36,647	0/0:49,0:33:26.46:0,26,865	0/0:57,0:45:98.30:0,98,1541	0/0:21,0:20:35.69:0,36,566	0/0:25,0:24:60.08:0,60,1008	0/0:21,0:22:48.15:0,48,818	0/0:41,0:40:96.27:0,96,1532	0/0:29,0:28:69.24:0,69,1205	0/0:27,0:26:78.21:0,78,1262	0/0:17,0:16:39.13:0,39,701	0/0:20,0:20:36.11:0,36,608	0/0:20,0:21:53.87:0,54,843	0/0:27,0:26:75.23:0,75,1272	0/0:25,0:25:72.13:0,72,1170	0/0:23,0:22:51.09:0,51,865	0/1:8,10:20:65.67:748,0,66	1/1:3,18:23:44.77:1091,45,0	0/0:20,0:17:36.12:0,36,647	0/0:20,0:20:44.98:0,45,735	0/0:56,0:56:99:0,129,2167	0/0:29,0:29:51.32:0,51,921	0/0:21,0:21:45.05:0,45,761	0/0:29,0:28:53.98:0,54,901	0/0:14,0:14:39:0,39,630	0/0:24,0:23:60.11:0,60,959	0/0:22,0:20:63.01:0,63,983	0/0:12,0:11:18.02:0,18,275
chr10	28600473	.	GGTATGTGTGTGTGGTGTGTGTGTGGTGTGTGTGTGGTGTGTGTGCATGTATGTGGTGT	G	8973.72	PASS	AB=0.847;AC=42;AF=0.750;AN=56;BaseQRankSum=-4.822;DP=502;FS=5.192;HRun=0;HaplotypeScore=440.0956;InbreedingCoeff=0.4198;MQ=47.72;MQ0=39;MQRankSum=6.069;QD=24.45;ReadPosRankSum=0.801;VQSLOD=1.6334;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:13:24.02:409,24,0	1/1:7,0:5:12:164,12,0	0/0:55,0:10:12.56:0,13,268	0/0:50,0:13:6.23:0,6,319	1/1:8,0:7:15.05:355,15,0	1/1:10,0:9:12.03:247,12,0	1/1:13,0:13:24.05:404,24,0	0/1:13,0:5:36.97:37,0,225	1/1:14,0:10:12.04:245,12,0	1/1:25,0:21:49.24:1137,49,0	1/1:9,0:7:9.01:212,9,0	0/1:16,0:16:99:572,0,120	1/1:10,0:9:26.85:569,27,0	1/1:17,0:15:26.25:512,26,0	1/1:12,0:12:30.05:522,30,0	1/1:17,0:16:27.06:662,27,0	0/0:15,0:15:33.03:0,33,1306	0/0:13,0:11:24.08:0,24,1293	0/1:18,0:8:48.03:87,0,48	0/1:6,20:25:84.84:136,0,85	1/1:38,0:33:50.66:829,51,0	0/1:2,27:29:0:0,0,0	1/1:13,0:12:14.97:258,15,0	1/1:17,0:17:11.29:296,11,0	1/1:8,0:8:9.01:150,9,0	0/1:13,0:12:99:529,0,203	1/1:11,0:9:24:427,24,0	1/1:7,0:6:12.02:217,12,0
chr10	28600485	.	TG	T	3502.92	PASS	AB=0.829;AC=41;AF=0.759;AN=54;BaseQRankSum=0.759;DP=466;FS=10.058;HRun=2;HaplotypeScore=94.4147;InbreedingCoeff=0.3310;MQ=43.35;MQ0=62;MQRankSum=3.552;QD=12.12;ReadPosRankSum=-2.141;VQSLOD=0.8177;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,3:10:12.03:138,12,0	1/1:2,1:1:3.01:34,3,0	0/0:48,1:5:12.04:0,12,150	0/0:56,0:7:8.89:0,9,82	1/1:7,3:7:14.70:142,15,0	1/1:2,6:7:9.03:110,9,0	1/1:7,4:10:17.61:172,18,0	0/0:15,0:4:8.99:0,9,133	1/1:4,7:5:12.01:125,12,0	1/1:10,11:15:11.44:401,11,0	1/1:5,3:6:5.81:47,6,0	0/1:7,9:14:17.79:243,0,18	1/1:4,5:7:18.04:215,18,0	1/1:4,8:9:17.79:189,18,0	1/1:8,4:9:19.29:237,19,0	1/1:5,12:14:23.70:259,24,0	0/1:13,1:14:8.14:8,0,339	0/1:13,1:11:42.52:43,0,246	0/1:14,2:5:27.56:28,0,29	0/0:23,0:22:3.47:0,3,29	1/1:24,11:25:30.35:345,30,0	./.	1/1:4,7:10:9.03:110,9,0	1/1:9,5:14:7.01:53,7,0	1/1:1,6:7:6.02:76,6,0	0/1:8,4:10:40.84:222,0,41	1/1:3,5:5:15.05:183,15,0	1/1:3,4:5:11.99:126,12,0
chr10	28600486	.	G	GT	4130.26	PASS	AB=0.926;AC=41;AF=0.759;AN=54;BaseQRankSum=0.737;DP=475;FS=10.007;HRun=1;HaplotypeScore=95.8398;InbreedingCoeff=0.3415;MQ=42.75;MQ0=62;MQRankSum=3.460;QD=14.00;ReadPosRankSum=-2.498;VQSLOD=1.4731;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,3:10:12.04:156,12,0	1/1:3,1:2:3.01:37,3,0	0/0:51,1:5:12.03:0,12,150	0/0:58,1:7:8.89:0,9,84	1/1:7,3:7:15.05:217,15,0	1/1:7,1:7:9.03:111,9,0	1/1:10,2:11:18.03:210,18,0	0/0:14,0:3:9.03:0,9,123	1/1:10,1:5:12.03:149,12,0	1/1:20,1:16:18.75:438,19,0	1/1:5,3:6:6.02:83,6,0	0/1:14,1:13:13.19:287,0,13	1/1:10,0:8:18.04:215,18,0	1/1:11,2:10:17.83:256,18,0	1/1:11,2:9:23.87:298,24,0	1/1:16,2:14:24.03:296,24,0	0/1:14,0:14:8.65:9,0,318	0/1:12,1:11:61.40:61,0,228	0/1:17,0:6:26.48:52,0,26	0/0:23,0:22:3.48:0,3,39	1/1:32,2:24:30.36:367,30,0	./.	1/1:9,1:9:9.03:111,9,0	1/1:10,4:14:10.33:101,10,0	1/1:7,0:7:6.02:76,6,0	0/1:9,4:11:34.86:257,0,35	1/1:6,2:5:15.05:198,15,0	1/1:7,0:5:12.03:144,12,0
chr10	28600487	.	G	GTA	402.91	PASS	AB=0.958;AC=14;AF=0.259;AN=54;BaseQRankSum=5.492;DP=517;FS=4.440;HRun=0;HaplotypeScore=136.6458;InbreedingCoeff=-0.2351;MQ=41.38;MQ0=62;MQRankSum=-3.927;QD=1.89;ReadPosRankSum=-3.230;VQSLOD=1.7640;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:10,1:8:7.01:0,7,27	1/1:4,0:2:2.29:6,2,0	0/0:55,0:5:10.24:0,10,84	0/0:60,0:7:8.97:0,9,73	0/0:12,1:10:11.32:0,11,63	0/1:10,0:9:24.83:26,0,25	0/0:14,0:13:12.71:0,13,55	0/0:13,0:3:8.94:0,9,92	0/0:11,0:5:8.56:0,9,44	0/1:22,0:16:5.61:6,0,86	0/0:8,0:6:3.25:0,3,10	0/1:18,1:17:25.76:26,0,103	0/0:10,0:8:13.39:0,13,59	0/0:14,0:11:15.71:0,16,72	0/1:15,1:12:64.75:111,0,65	0/1:20,1:17:12.36:12,0,72	0/0:14,0:14:26.92:0,27,361	0/0:14,0:12:26.43:0,26,319	0/1:19,0:8:10.88:66,0,11	0/0:23,0:22:3.01:0,3,45	0/1:34,3:26:23.81:24,0,97	./.	0/1:13,0:12:16.87:71,0,17	0/1:13,3:16:13.36:93,0,13	0/1:12,0:12:24.52:27,0,25	0/1:16,0:14:25.16:25,0,148	0/0:10,0:7:12.08:0,12,52	0/1:7,1:6:14.12:55,0,14
chr10	28600496	.	TG	T	1290.79	PASS	AB=0.816;AC=23;AF=0.426;AN=54;BaseQRankSum=-0.834;DP=525;FS=1.379;HRun=2;HaplotypeScore=123.1308;InbreedingCoeff=-0.2867;MQ=32.58;MQ0=70;MQRankSum=1.144;QD=4.93;ReadPosRankSum=0.957;VQSLOD=0.6175;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:15,2:14:38.76:39,0,133	0/1:2,1:2:0.82:29,0,1	0/0:57,2:3:9.02:0,9,101	0/0:71,3:7:12:0,12,156	0/1:10,0:8:27.76:38,0,28	0/1:6,4:9:27.63:28,0,30	0/1:10,4:13:1.02:1,0,45	0/1:17,2:7:56.61:57,0,92	0/1:6,2:4:3.97:4,0,19	0/1:14,7:16:99:285,0,143	0/1:9,1:8:25.61:26,0,34	0/1:13,6:17:75.69:110,0,76	0/1:5,5:8:2.07:172,0,2	0/1:11,5:13:99:106,0,121	0/0:10,1:7:8.82:0,9,69	1/1:9,10:16:17.56:200,18,0	0/1:13,1:14:11.08:11,0,302	0/0:12,1:11:1.64:0,2,362	0/1:15,1:6:22.19:22,0,87	0/0:24,0:23:3.48:0,3,46	0/0:32,5:24:4.14:0,4,97	./.	1/1:5,9:13:9.01:110,9,0	0/1:12,7:19:35.29:35,0,41	0/0:8,3:11:2.90:0,3,16	0/1:10,2:10:87.55:88,0,165	1/1:5,1:5:6.02:69,6,0	0/1:3,2:4:12.93:14,0,13
chr10	28600497	.	GGT	G	114.05	PASS	AB=0.976;AC=16;AF=0.296;AN=54;BaseQRankSum=0.278;DP=510;FS=10.420;HRun=0;HaplotypeScore=125.6435;InbreedingCoeff=0.2091;MQ=32.17;MQ0=70;MQRankSum=1.375;QD=0.70;ReadPosRankSum=-5.273;VQSLOD=-0.2627;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:14:4.83:25,5,0	1/1:2,1:2:3.01:34,3,0	0/0:58,0:3:8.56:0,9,73	0/0:73,2:7:0.05:0,0,122	0/1:8,0:6:1.98:15,0,2	0/0:10,0:9:0.45:0,0,1	0/1:13,0:11:9.26:34,0,9	0/0:19,0:8:7.22:0,7,72	0/0:5,0:3:2.99:0,3,30	0/0:19,0:16:3.43:0,3,51	0/1:7,1:7:0:0,0,0	0/1:18,0:16:9.19:15,0,9	0/0:10,0:8:0.48:0,1,0	1/1:14,0:12:1.28:2,1,0	0/0:11,0:7:1.86:0,2,20	0/0:18,0:15:1.85:0,2,2	0/0:13,0:13:19.82:0,20,228	0/0:12,0:10:27.87:0,28,370	0/1:16,0:6:3.29:16,0,3	0/0:24,0:23:3.01:0,3,48	0/1:37,0:24:1.03:9,0,1	./.	0/0:14,0:13:1.41:0,1,2	0/0:17,0:17:0.93:0,1,15	1/1:10,1:11:8.92:62,9,0	0/1:11,1:10:25.08:25,0,56	0/1:5,0:4:0:0,0,0	0/0:5,0:4:1.54:0,2,4
chr10	28600527	.	GGTGT	G	7667.24	PASS	AB=0.655;AC=45;AF=0.804;AN=56;BaseQRankSum=-5.036;DP=648;FS=11.307;HRun=0;HaplotypeScore=125.5730;InbreedingCoeff=0.5427;MQ=37.48;MQ0=64;MQRankSum=1.651;QD=16.85;ReadPosRankSum=0.090;VQSLOD=4.1357;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:14,10:23:30.29:540,30,0	0/1:0,3:4:0.41:132,0,0	0/0:73,0:7:4.56:0,5,47	0/0:94,0:9:0:0,0,0	1/1:1,13:13:24.01:384,24,0	1/1:1,9:10:15.05:240,15,0	1/1:6,11:18:26.98:365,27,0	1/1:28,3:18:20.09:277,20,0	1/1:4,6:7:15.05:240,15,0	1/1:14,16:26:38.24:754,38,0	1/1:4,6:9:6.49:97,6,0	1/1:5,14:17:5.09:317,5,0	1/1:3,7:10:18.01:240,18,0	1/1:6,9:13:18.06:278,18,0	1/1:6,11:16:32.56:469,33,0	1/1:1,11:12:27.09:412,27,0	0/0:11,0:11:9.48:0,9,94	0/0:8,0:12:24.06:0,24,287	1/1:18,1:12:15.01:169,15,0	0/1:25,0:24:0.81:69,0,1	1/1:30,18:39:16.88:391,17,0	1/1:31,1:31:3.01:47,3,0	1/1:5,5:10:2.51:180,3,0	1/1:7,21:29:41.62:670,42,0	1/1:2,11:16:20.57:537,21,0	1/1:10,6:10:18.06:272,18,0	1/1:3,8:12:20.98:322,21,0	0/1:1,7:8:0.91:267,0,1
chr10	28601550	.	TAA	T	8002.04	PASS	AB=0.692;AC=51;AF=0.911;AN=56;BaseQRankSum=-5.661;DP=534;FS=6.411;HRun=14;HaplotypeScore=73.8837;InbreedingCoeff=0.7684;MQ=73.69;MQ0=5;MQRankSum=-2.684;QD=16.40;ReadPosRankSum=5.358;VQSLOD=4.0079;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,27:32:58.25:552,58,0	1/1:1,7:8:14.98:139,15,0	0/0:29,0:21:44.86:0,45,495	0/0:16,0:11:12.77:0,13,182	1/1:7,18:25:44.79:406,45,0	1/1:5,15:21:35.62:317,36,0	1/1:0,10:10:27.03:250,27,0	1/1:8,22:31:60.98:555,61,0	1/1:4,14:18:23.89:269,24,0	1/1:6,15:22:47.75:428,48,0	1/1:5,12:18:35.65:317,36,0	1/1:5,14:19:35.65:316,36,0	1/1:3,5:8:14.99:139,15,0	1/1:2,11:15:35.48:301,35,0	1/1:4,12:18:32.37:320,32,0	1/1:4,10:16:25.95:248,26,0	1/1:3,0:18:27.40:118,27,0	1/1:4,0:16:24.67:107,25,0	1/1:8,17:27:53.51:509,54,0	1/1:6,8:14:20.94:194,21,0	1/1:3,7:11:23.76:206,24,0	0/1:5,4:9:5.05:71,0,5	1/1:4,14:19:8.58:300,9,0	1/1:2,18:20:39.02:361,39,0	1/1:6,15:23:17.69:260,18,0	1/1:4,24:30:74.44:653,74,0	1/1:6,17:22:47.96:444,48,0	1/1:7,10:15:23.92:222,24,0
chr10	28602992	.	G	GATC	3754.17	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-2.034;DP=753;FS=2.418;HRun=0;HaplotypeScore=103.8504;InbreedingCoeff=0.9950;MQ=72.69;MQ0=1;MQRankSum=-2.012;QD=59.59;ReadPosRankSum=1.452;VQSLOD=5.6585;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,151,2645	0/0:6,0:6:18.06:0,18,318	0/0:18,0:19:32.69:0,33,720	0/0:14,0:14:27.74:0,28,514	0/0:29,0:29:87.28:0,87,1507	0/0:18,0:18:54.16:0,54,891	0/0:41,0:41:99:0,123,2112	0/0:21,0:21:63.22:0,63,1104	0/0:32,0:32:93.28:0,93,1575	0/0:34,0:34:99:0,102,1747	0/0:16,0:16:45.15:0,45,763	0/0:29,0:29:81.28:0,81,1427	0/0:34,0:34:96.33:0,96,1678	0/0:20,0:20:57.18:0,57,976	0/0:29,0:29:87.28:0,87,1498	0/0:18,0:18:54.17:0,54,918	1/1:5,29:35:87.30:2057,87,0	1/1:2,24:28:72.25:1698,72,0	0/0:19,0:19:51.17:0,51,892	0/0:22,0:22:66.23:0,66,1165	0/0:53,0:52:99:0,154,2671	0/0:24,0:24:69.22:0,69,1184	0/0:10,0:10:30.10:0,30,529	0/0:42,0:42:99:0,114,1950	0/0:28,0:28:81.28:0,81,1429	0/0:32,0:32:84.29:0,84,1463	0/0:32,0:32:96.27:0,96,1600	0/0:17,0:17:48.16:0,48,847
chr10	28603447	.	CTT	C	982.87	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.061;DP=513;FS=4.911;HRun=4;HaplotypeScore=68.8591;InbreedingCoeff=0.9897;MQ=86.07;MQ0=0;MQRankSum=-0.261;QD=33.89;ReadPosRankSum=2.660;VQSLOD=3.0785;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,111,1956	0/0:8,0:8:24.07:0,24,414	0/0:23,0:23:34.13:0,34,906	0/0:23,0:23:51.05:0,51,901	0/0:18,0:18:54.17:0,54,963	0/0:13,0:13:39.13:0,39,719	0/0:17,0:17:51.17:0,51,955	0/0:36,0:36:99:0,105,1865	0/0:13,0:13:39.13:0,39,722	0/0:13,0:13:39.13:0,39,702	0/0:17,0:17:51.15:0,51,882	0/0:19,0:19:57.15:0,57,1027	0/0:12,0:12:27.06:0,27,471	0/0:11,0:11:30.10:0,30,562	0/0:24,0:24:69.24:0,69,1292	0/0:14,0:14:42.14:0,42,786	1/1:0,22:22:57.19:838,57,0	1/1:1,6:7:18.06:265,18,0	0/0:16,0:16:45.13:0,45,803	0/0:19,0:19:57.19:0,57,1038	0/0:21,0:21:60.07:0,60,968	0/0:18,0:18:54.17:0,54,955	0/0:19,0:19:57.18:0,57,1027	0/0:23,0:23:66.21:0,66,1201	0/0:20,0:20:60.20:0,60,1098	0/0:21,0:21:63.21:0,63,1149	0/0:20,0:20:60.19:0,60,1086	0/0:6,0:6:18.06:0,18,330
chr10	28603530	.	T	TCA	2820.22	PASS	AB=0.997;AC=29;AF=0.518;AN=56;BaseQRankSum=6.530;DP=508;FS=26.199;HRun=0;HaplotypeScore=90.1163;InbreedingCoeff=-0.1478;MQ=47.17;MQ0=29;MQRankSum=1.947;QD=7.12;ReadPosRankSum=1.601;VQSLOD=1.6460;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,12:29:12.90:0,13,98	0/1:8,0:7:32.13:32,0,53	0/0:6,0:1:2.90:0,3,16	0/0:10,0:2:5.99:0,6,51	0/1:16,0:16:21.63:40,0,22	0/1:19,0:17:61.29:96,0,61	0/1:23,0:22:20.33:187,0,20	0/1:23,0:23:78.24:188,0,78	0/1:13,0:13:1.74:105,0,2	0/1:21,0:21:91.45:175,0,91	1/1:12,0:11:11.83:89,12,0	0/0:23,0:21:14.24:0,14,175	0/0:23,0:23:11.80:0,12,83	0/1:13,0:12:42.77:58,0,43	0/0:19,0:17:7.56:0,8,74	1/1:16,0:15:26.97:223,27,0	1/1:14,0:13:14.38:99,14,0	0/1:10,0:9:1.23:94,0,1	0/1:12,0:10:40.11:113,0,40	1/1:21,0:20:14.02:221,14,0	1/1:14,0:14:1.39:92,1,0	0/1:29,0:29:39.14:126,0,39	0/1:20,0:17:68.28:68,0,68	0/1:38,1:36:99:304,0,136	0/1:18,0:18:29.50:136,0,30	0/1:27,0:23:99:145,0,109	1/1:23,0:23:8.80:376,9,0	1/1:4,0:4:2.54:22,3,0
chr10	28603532	.	T	TCACA	7788.97	PASS	AB=0.949;AC=44;AF=0.786;AN=56;BaseQRankSum=-1.819;DP=530;FS=1.361;HRun=0;HaplotypeScore=99.4122;InbreedingCoeff=0.2779;MQ=47.30;MQ0=29;MQRankSum=1.389;QD=15.77;ReadPosRankSum=1.950;VQSLOD=4.7274;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:31,0:29:23.92:43,0,24	1/1:8,0:7:9.43:112,9,0	0/0:6,0:1:3.01:0,3,31	0/0:10,0:2:6.02:0,6,75	0/1:18,0:18:2.55:118,0,3	1/1:20,0:18:17.78:264,18,0	1/1:24,0:23:35.76:501,36,0	1/1:24,0:24:43.67:598,44,0	1/1:14,0:14:18.06:283,18,0	1/1:23,0:23:33.47:507,33,0	1/1:15,0:14:15.03:202,15,0	0/1:13,0:21:0.06:0,0,0	1/1:23,0:23:3.87:28,4,0	1/1:13,0:12:11.99:167,12,0	0/0:11,9:18:2.89:0,3,33	1/1:15,0:14:30.09:470,30,0	1/1:14,0:13:15.35:199,15,0	1/1:11,0:10:18.51:245,19,0	0/1:14,0:12:31.75:257,0,32	1/1:21,0:20:29.83:485,30,0	1/1:15,0:15:18.52:247,19,0	0/1:29,0:29:20.77:303,0,21	0/1:20,0:17:33.92:147,0,34	1/1:40,0:36:58.07:808,58,0	1/1:20,0:20:35.48:452,35,0	1/1:29,0:25:30:446,30,0	1/1:25,0:25:54.17:840,54,0	1/1:5,0:5:5.99:67,6,0
chr10	28603536	.	A	ACACA	7796.59	PASS	AB=1.000;AC=44;AF=0.786;AN=56;BaseQRankSum=-2.336;DP=543;FS=0.000;HRun=0;HaplotypeScore=105.8302;InbreedingCoeff=0.2937;MQ=47.93;MQ0=30;MQRankSum=1.593;QD=15.56;ReadPosRankSum=2.466;VQSLOD=4.5254;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:31:23.92:43,0,24	1/1:8,0:7:9.43:112,9,0	0/0:9,0:3:3.01:0,3,31	0/0:13,0:3:6.02:0,6,75	0/1:18,0:18:2.55:118,0,3	1/1:19,0:18:17.78:264,18,0	1/1:22,0:21:35.76:501,36,0	1/1:24,0:24:43.67:598,44,0	1/1:14,0:14:18.06:283,18,0	1/1:22,0:22:33.47:507,33,0	1/1:13,0:13:15.03:202,15,0	0/1:26,0:24:0:0,0,0	1/1:14,9:24:4.35:28,4,0	1/1:14,0:13:11.99:167,12,0	0/0:20,0:18:4.91:0,5,39	1/1:15,0:14:30.09:470,30,0	1/1:14,0:13:15.35:199,15,0	1/1:12,0:11:20.73:252,21,0	0/1:14,0:11:31.75:257,0,32	1/1:22,0:21:29.83:485,30,0	1/1:13,0:13:18.52:247,19,0	0/1:30,0:30:20.77:303,0,21	0/1:22,0:19:33.92:147,0,34	1/1:39,0:35:58.07:808,58,0	1/1:21,0:21:35.48:452,35,0	1/1:30,0:26:30:446,30,0	1/1:27,0:27:54.17:840,54,0	1/1:5,0:5:5.99:67,6,0
chr10	28603559	.	C	CAC	4676.31	PASS	AB=1.000;AC=47;AF=0.839;AN=56;BaseQRankSum=2.910;DP=537;FS=1.595;HRun=0;HaplotypeScore=86.0369;InbreedingCoeff=0.3779;MQ=64.21;MQ0=19;MQRankSum=1.997;QD=9.78;ReadPosRankSum=2.031;VQSLOD=4.2968;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:26:6.95:37,0,7	1/1:5,0:5:11.96:94,12,0	0/0:21,0:14:2.88:0,3,15	0/0:23,0:13:5.64:0,6,26	1/1:17,0:17:11.55:94,12,0	1/1:17,0:17:17.97:148,18,0	1/1:26,0:25:33.57:247,34,0	1/1:30,0:30:30.97:360,31,0	1/1:13,0:13:17.95:145,18,0	1/1:22,0:22:36.43:321,36,0	1/1:14,0:14:14.83:114,15,0	1/1:19,0:19:2.04:6,2,0	1/1:18,0:18:5.99:49,6,0	1/1:11,0:10:11.95:94,12,0	0/0:15,0:14:2.37:0,2,8	1/1:13,0:13:29.96:247,30,0	1/1:16,0:16:14.16:100,14,0	1/1:11,0:11:20.88:157,21,0	0/1:17,0:15:5.59:121,0,6	1/1:19,0:20:29.98:266,30,0	1/1:15,0:15:20.87:156,21,0	1/1:18,5:24:4.76:189,5,0	0/1:22,0:21:9.55:97,0,10	1/1:31,0:29:57.74:488,58,0	1/1:19,0:19:35.65:289,36,0	1/1:29,0:26:44.76:363,45,0	1/1:29,0:29:53.79:452,54,0	1/1:12,0:12:5.97:45,6,0
chr10	28606913	.	C	CGTGT	1816.47	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=-1.506;DP=798;FS=0.668;HRun=0;HaplotypeScore=164.2404;InbreedingCoeff=0.8533;MQ=60.32;MQ0=11;MQRankSum=0.370;QD=22.15;ReadPosRankSum=2.005;VQSLOD=3.4754;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:48:95.15:0,95,1479	0/0:14,0:14:36.10:0,36,560	0/0:20,0:12:10.81:0,11,121	0/1:17,0:13:0.77:1,0,159	0/0:24,0:25:66.19:0,66,1029	0/0:24,0:24:54.15:0,54,874	0/0:25,0:25:63.10:0,63,958	0/0:26,0:24:53.72:0,54,745	0/0:24,0:24:60.14:0,60,908	0/0:34,0:32:89.57:0,90,1323	0/0:19,0:19:48.14:0,48,774	0/0:37,0:36:80.24:0,80,1238	0/0:23,0:23:60.08:0,60,895	0/0:26,0:25:62.96:0,63,979	0/0:23,0:23:60.15:0,60,917	0/0:14,0:15:39.04:0,39,558	1/1:4,30:40:44.42:1013,44,0	1/1:6,17:25:38.92:924,39,0	0/0:28,0:26:55.98:0,56,740	0/0:32,0:31:75.02:0,75,1057	0/0:75,0:71:99:0,169,2575	0/0:29,0:29:87.12:0,87,1262	0/0:35,0:34:94.95:0,95,1373	0/0:30,0:30:77.85:0,78,1170	0/0:28,0:28:66.19:0,66,1101	0/0:39,0:38:86.69:0,87,1302	0/0:22,0:22:60.20:0,60,1026	0/0:13,0:13:33.11:0,33,547
chr10	28608338	.	TG	T	1700.54	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.910;DP=638;FS=0.543;HRun=3;HaplotypeScore=62.3355;InbreedingCoeff=0.9973;MQ=93.37;MQ0=0;MQRankSum=-2.541;QD=33.34;ReadPosRankSum=2.040;VQSLOD=4.1588;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,132,1857	0/0:8,0:8:24.07:0,24,325	0/0:21,0:21:60.20:0,60,849	0/0:34,0:34:99:0,99,1308	0/0:24,0:24:69.23:0,69,993	0/0:25,0:25:75.25:0,75,1078	0/0:31,0:31:93.05:0,93,1308	0/0:30,0:30:90.30:0,90,1296	0/0:20,0:20:54.16:0,54,756	0/0:21,0:21:63.21:0,63,907	0/0:11,0:11:33.11:0,33,473	0/0:24,0:24:69.23:0,69,993	0/0:20,0:20:60.15:0,60,822	0/0:24,0:24:72.24:0,72,1033	0/0:31,0:31:93.31:0,93,1339	0/0:12,0:12:36.12:0,36,518	1/1:2,26:28:78.24:967,78,0	1/1:0,23:23:69.22:855,69,0	0/0:24,0:24:72.24:0,72,1036	0/0:10,0:10:30.10:0,30,432	0/0:40,0:40:99:0,120,1707	0/0:18,0:18:51.14:0,51,697	0/0:17,0:17:48.16:0,48,689	0/0:26,0:25:78.22:0,78,1100	0/0:25,0:25:75.25:0,75,1077	0/0:11,0:11:33.10:0,33,459	0/0:26,0:26:78.25:0,78,1103	0/0:8,0:8:24.08:0,24,346
chr10	28608890	.	TCCCTTAA	T	1512.13	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.081;DP=713;FS=11.327;HRun=0;HaplotypeScore=161.0687;InbreedingCoeff=0.9968;MQ=88.35;MQ0=0;MQRankSum=-7.724;QD=42.00;ReadPosRankSum=3.106;VQSLOD=3.0336;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,105,4102	0/0:9,0:9:24.55:0,25,929	0/0:28,0:28:74.97:0,75,2607	0/0:25,0:25:66.22:0,66,2445	0/0:24,0:24:72.25:0,72,2813	0/0:22,0:22:63.19:0,63,2262	0/0:31,0:31:90.30:0,90,3243	0/0:31,0:31:87.30:0,87,3263	0/0:36,0:36:99:0,105,3937	0/0:26,0:26:78.27:0,78,3037	0/0:19,0:19:57.20:0,57,2177	0/0:40,0:40:99:0,114,4423	0/0:26,0:26:69.22:0,69,2561	0/0:27,0:27:81.26:0,81,2973	0/0:29,0:29:87.30:0,87,3365	0/0:28,0:28:84.29:0,84,3250	1/1:4,21:25:42.14:1089,42,0	1/1:2,9:11:21.07:544,21,0	0/0:14,0:14:36.11:0,36,1292	0/0:23,0:23:66.21:0,66,2476	0/0:37,0:37:99:0,106,3986	0/0:33,0:33:96.33:0,96,3581	0/0:19,0:19:54.18:0,54,1991	0/0:23,0:23:66.23:0,66,2512	0/0:21,0:21:54.18:0,54,2119	0/0:31,0:31:93.32:0,93,3627	0/0:23,0:22:60.21:0,60,2258	0/0:11,0:11:33.11:0,33,1311
chr10	28609136	.	GAGAA	G	1362.14	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.519;DP=663;FS=4.648;HRun=0;HaplotypeScore=107.8363;InbreedingCoeff=0.9915;MQ=79.54;MQ0=0;MQRankSum=-1.951;QD=33.22;ReadPosRankSum=0.857;VQSLOD=3.7226;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:81.28:0,81,2005	0/0:6,0:6:15.05:0,15,370	0/0:29,0:28:42.14:0,42,990	0/0:29,0:27:47.84:0,48,898	0/0:22,0:22:54.19:0,54,1334	0/0:33,0:33:84.29:0,84,2105	0/0:28,0:28:69.23:0,69,1604	0/0:37,0:37:78.26:0,78,1888	0/0:20,0:20:45.15:0,45,1094	0/0:31,0:31:81.28:0,81,1944	0/0:15,0:15:39.12:0,39,900	0/0:27,0:27:57.20:0,57,1429	0/0:19,0:19:51.18:0,51,1253	0/0:18,0:18:42.13:0,42,969	0/0:28,0:28:69.24:0,69,1729	0/0:27,0:27:69.24:0,69,1730	1/1:7,17:26:54.18:921,54,0	1/1:3,12:15:33.11:563,33,0	0/0:18,0:18:36.12:0,36,851	0/0:16,0:16:42.14:0,42,1052	0/0:22,0:22:51.17:0,51,1230	0/0:26,0:26:66.23:0,66,1632	0/0:20,0:20:39.13:0,39,975	0/0:20,0:20:48.16:0,48,1203	0/0:19,0:19:39.13:0,39,969	0/0:34,0:34:84.29:0,84,2059	0/0:33,1:34:45.40:0,45,2237	0/0:14,0:14:39.13:0,39,960
chr10	28609342	.	G	GTGGGC	689.74	PASS	AB=0.778;AC=2;AF=0.036;AN=56;BaseQRankSum=5.224;DP=434;FS=7.564;HRun=0;HaplotypeScore=89.0102;InbreedingCoeff=0.1639;MQ=65.30;MQ0=3;MQRankSum=-5.251;QD=28.74;ReadPosRankSum=0.336;VQSLOD=2.8056;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:84.24:0,84,1774	0/0:4,0:4:12:0,12,229	0/0:12,0:10:30.10:0,30,648	0/0:9,0:7:15.05:0,15,320	0/0:14,0:14:42.13:0,42,912	0/0:11,0:11:33.10:0,33,698	0/0:21,0:20:57.08:0,57,1131	0/0:15,0:15:45.15:0,45,919	0/0:18,0:18:54.15:0,54,1140	0/0:20,0:20:60.16:0,60,1308	0/0:13,0:13:39.13:0,39,893	0/0:27,0:27:81.26:0,81,1801	0/0:15,0:15:45.15:0,45,1017	0/0:11,0:11:30.10:0,30,673	0/0:20,0:20:59.18:0,59,1185	0/0:19,0:19:57.20:0,57,1327	0/1:14,2:16:99:454,0,152	0/1:4,4:7:27.06:324,0,27	0/0:15,0:15:42.12:0,42,876	0/0:12,0:12:36.12:0,36,785	0/0:20,0:20:57.16:0,57,1247	0/0:17,0:17:51.17:0,51,1161	0/0:7,0:7:21.04:0,21,440	0/0:26,0:26:75.26:0,75,1634	0/0:12,0:12:36.12:0,36,784	0/0:17,0:17:51.16:0,51,1095	0/0:23,0:22:66.23:0,66,1507	0/0:3,0:1:0.47:0,0,1
chr10	28609644	.	G	GTGGTTATT	2996.70	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=3.289;DP=591;FS=2.748;HRun=0;HaplotypeScore=145.9158;InbreedingCoeff=0.9757;MQ=90.20;MQ0=0;MQRankSum=-7.479;QD=93.65;ReadPosRankSum=-0.004;VQSLOD=4.1068;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,108,3206	0/0:5,0:5:12.04:0,12,321	0/0:24,0:24:67.35:0,67,1857	0/0:28,0:28:84.24:0,84,2142	0/0:19,0:19:54.18:0,54,1581	0/0:21,0:21:60.19:0,60,1655	0/0:17,0:17:51.16:0,51,1374	0/0:23,0:23:66.18:0,66,1635	0/0:24,0:24:72.23:0,72,2090	0/0:20,0:20:57.66:0,58,1657	0/0:7,0:7:21.07:0,21,624	0/0:21,0:21:63.16:0,63,1773	0/0:21,0:21:57.15:0,57,1485	0/0:21,0:21:57.17:0,57,1587	0/0:25,0:25:72.22:0,72,2051	0/0:36,0:36:99:0,108,2925	1/1:3,7:13:27.09:1214,27,0	1/1:6,10:19:42.14:1904,42,0	0/0:22,0:22:66.22:0,66,1887	0/0:15,0:15:45.15:0,45,1265	0/0:36,0:36:99:0,108,3156	0/0:14,0:14:39:0,39,1105	0/0:15,0:15:45.15:0,45,1360	0/0:43,0:43:99:0,126,3641	0/0:7,0:7:21.07:0,21,636	0/0:23,0:23:69.24:0,69,2085	0/0:30,0:30:84.19:0,84,2385	0/0:6,0:6:18.06:0,18,545
chr10	28613262	.	A	AT	14760.17	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-10.988;DP=609;FS=0.000;HRun=8;HaplotypeScore=58.0253;InbreedingCoeff=0.9754;MQ=71.60;MQ0=0;MQRankSum=-4.742;QD=28.88;ReadPosRankSum=1.539;VQSLOD=5.0876;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,30:34:81.24:935,81,0	1/1:0,4:4:6.90:71,7,0	0/0:24,0:23:43.52:0,44,374	0/0:21,0:21:44.47:0,44,387	1/1:4,19:23:54.12:609,54,0	1/1:1,18:19:51.15:589,51,0	1/1:2,18:20:51.15:589,51,0	1/1:10,24:33:69.19:786,69,0	1/1:1,14:15:30.09:346,30,0	1/1:0,28:28:84.25:969,84,0	1/1:1,17:18:51.03:544,51,0	1/1:3,18:21:48.61:555,49,0	1/1:2,14:16:39.12:450,39,0	1/1:4,18:22:51.14:581,51,0	1/1:1,19:20:57.17:658,57,0	1/1:2,18:20:48.14:554,48,0	0/0:25,0:24:66.03:0,66,604	0/0:28,0:28:81.04:0,81,741	1/1:4,20:24:63.12:708,63,0	1/1:1,18:19:54.16:623,54,0	1/1:3,27:30:78.23:900,78,0	1/1:2,13:15:39.12:450,39,0	1/1:1,21:22:57.12:658,57,0	1/1:3,29:32:81.24:935,81,0	1/1:2,15:17:33.10:381,33,0	1/1:1,20:21:60.18:693,60,0	1/1:1,23:24:69.21:796,69,0	1/1:0,13:13:33.10:381,33,0
chr10	28614931	.	T	TTGAATGAATGAA	27101.98	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-6.881;DP=630;FS=9.453;HRun=0;HaplotypeScore=171.2752;InbreedingCoeff=0.8404;MQ=61.74;MQ0=1;MQRankSum=-5.703;QD=49.64;ReadPosRankSum=-0.029;VQSLOD=3.9572;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,6:19:6.49:351,6,0	1/1:2,7:9:12.04:370,12,0	0/0:19,0:18:9.02:0,9,115	0/0:18,0:17:3.01:0,3,76	1/1:16,11:32:53.94:1681,54,0	1/1:13,15:31:36.12:1979,36,0	1/1:19,0:19:26.99:657,27,0	1/1:31,0:31:42.10:906,42,0	1/1:12,9:22:24.08:1190,24,0	1/1:14,7:21:33.09:1373,33,0	1/1:12,10:25:27.05:1125,27,0	1/1:13,11:26:36.12:1736,36,0	1/1:22,10:32:33.11:1557,33,0	1/1:4,7:11:12.04:675,12,0	1/1:22,19:43:42.14:2150,42,0	1/1:9,0:23:30.10:801,30,0	0/0:5,0:26:16.15:0,16,43	0/0:5,0:19:7.78:0,8,21	1/1:14,6:22:23.93:677,24,0	1/1:8,9:18:33.08:1575,33,0	1/1:7,5:15:15.01:513,15,0	1/1:8,8:17:30.06:1513,30,0	1/1:12,13:26:24.75:1076,25,0	1/1:12,0:22:15.85:269,16,0	1/1:7,3:11:15.05:733,15,0	1/1:14,14:30:60.14:1918,60,0	1/1:11,12:22:33.11:1830,33,0	1/1:10,5:15:12.04:446,12,0
chr10	28616249	.	TAC	T	986.79	PASS	AB=0.932;AC=10;AF=0.179;AN=56;BaseQRankSum=8.640;DP=585;FS=1.939;HRun=0;HaplotypeScore=73.8316;InbreedingCoeff=0.2690;MQ=59.96;MQ0=2;MQRankSum=-0.845;QD=5.94;ReadPosRankSum=1.124;VQSLOD=2.9549;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:62.80:0,63,924	0/0:6,0:6:18.06:0,18,285	0/1:20,0:10:32.12:32,0,119	0/0:14,0:9:5.89:0,6,158	0/0:24,0:24:48.15:0,48,838	0/0:32,1:33:48.71:0,49,1224	0/0:18,1:19:2.18:0,2,552	0/0:27,0:27:54.17:0,54,834	0/1:11,1:12:11.47:11,0,303	0/1:23,2:25:15.98:16,0,677	0/0:27,0:27:63.19:0,63,965	0/1:18,2:20:22.07:22,0,565	0/0:21,0:21:39.13:0,39,613	0/0:14,0:14:42.14:0,42,663	0/0:24,1:25:15.62:0,16,726	0/0:23,0:23:54.16:0,54,832	1/1:4,23:27:57.17:675,57,0	1/1:3,12:15:13.77:369,14,0	0/1:14,1:15:5.46:5,0,383	0/0:19,0:19:35.91:0,36,570	0/0:34,0:34:60.14:0,60,895	0/0:7,0:7:18.06:0,18,285	0/0:21,0:21:45.10:0,45,682	0/0:14,0:14:30.10:0,30,472	0/0:21,0:21:45.14:0,45,691	0/1:28,2:30:1.17:1,0,1002	0/0:34,0:33:78.22:0,78,1173	0/0:9,0:9:21.07:0,21,333
chr10	28618053	.	T	TCACACACA	910.27	PASS	AB=1.000;AC=24;AF=0.444;AN=54;BaseQRankSum=7.058;DP=310;FS=45.791;HRun=0;HaplotypeScore=77.9699;InbreedingCoeff=-0.2385;MQ=34.66;MQ0=29;MQRankSum=-2.995;QD=4.60;ReadPosRankSum=-0.096;VQSLOD=-0.3349;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:15:2.87:30,3,0	0/1:6,0:6:43.87:86,0,44	0/0:20,0:9:24.01:0,24,572	0/0:12,0:7:15.05:0,15,435	0/1:12,0:8:18.94:27,0,19	0/1:15,0:14:31.84:45,0,32	0/0:18,0:16:12.47:0,12,198	0/0:10,0:8:24.08:0,24,548	0/1:9,0:8:28.56:29,0,150	0/1:7,0:6:99:121,0,254	1/1:13,0:12:2.94:18,3,0	1/1:9,0:8:3.01:71,3,0	0/1:14,0:12:73.94:74,0,231	0/1:7,0:7:62.24:62,0,247	0/0:6,6:12:6.02:0,6,94	1/1:10,0:10:2.76:75,3,0	0/1:8,0:8:64.88:105,0,65	0/1:8,0:6:16.93:17,0,73	0/1:4,0:4:33.64:34,0,215	0/0:10,0:9:5.99:0,6,104	0/1:17,0:13:72.82:82,0,73	1/1:10,0:10:2.04:6,2,0	./.	0/0:12,2:12:9.03:0,9,244	0/1:9,0:9:11.59:12,0,20	0/1:11,0:11:77.11:77,0,557	0/1:12,0:11:99:99,0,276	0/0:4,0:3:9.02:0,9,147
chr10	28618057	.	T	TCACACACACACA	1622.75	PASS	AB=1.000;AC=26;AF=0.542;AN=48;BaseQRankSum=5.776;DP=291;FS=47.929;HRun=0;HaplotypeScore=85.1019;InbreedingCoeff=-0.0290;MQ=38.65;MQ0=24;MQRankSum=-1.910;QD=8.97;ReadPosRankSum=0.610;VQSLOD=-0.3056;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:11:3.01:84,3,0	1/1:1,3:4:3.01:186,3,0	0/0:20,0:10:27.08:0,27,806	0/0:13,0:10:24.08:0,24,705	1/1:9,0:5:2.94:18,3,0	1/1:6,5:14:5.47:92,5,0	0/1:16,0:14:3.91:4,0,54	0/0:10,0:8:23.74:0,24,289	0/1:9,0:8:5.46:5,0,216	0/1:6,0:5:99:200,0,288	./.	1/1:9,0:8:3.01:109,3,0	0/1:14,0:12:99:167,0,203	0/1:8,0:8:99:102,0,232	0/0:12,0:11:0:0,0,0	1/1:9,0:9:5.78:130,6,0	1/1:7,0:7:14.93:172,15,0	0/1:8,0:6:46.06:46,0,82	0/1:4,0:4:77.48:77,0,186	0/0:9,0:8:3.47:0,3,97	1/1:15,0:11:7.40:81,7,0	./.	./.	0/1:15,0:13:17.54:18,0,268	./.	0/1:11,0:11:99:152,0,531	0/1:10,0:9:99:128,0,297	0/0:4,0:3:4.83:0,5,84
chr10	28618061	.	T	TCACACACACACACA	2171	PASS	AB=1.000;AC=28;AF=0.583;AN=48;BaseQRankSum=4.721;DP=286;FS=56.688;HRun=0;HaplotypeScore=87.7201;InbreedingCoeff=0.0004;MQ=42.66;MQ0=23;MQRankSum=-2.847;QD=11.86;ReadPosRankSum=0.386;VQSLOD=-0.6418;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:10,0:8:3.01:106,3,0	1/1:4,0:4:3.01:186,3,0	0/0:21,0:11:30.10:0,30,942	0/0:16,0:13:36.12:0,36,1151	1/1:7,0:4:2.04:6,2,0	1/1:13,0:13:5.62:174,6,0	1/1:16,0:14:5.66:75,6,0	0/0:10,0:8:6.48:0,6,84	0/0:9,0:8:5.56:0,6,109	0/1:6,0:5:99:250,0,120	./.	1/1:8,0:7:3.01:124,3,0	0/1:13,0:11:79.93:182,0,80	0/1:6,0:6:81.75:149,0,82	0/1:13,0:12:0:0,0,0	1/1:8,0:8:5.87:184,6,0	1/1:6,0:6:12.04:177,12,0	0/1:9,0:7:61.85:111,0,62	0/1:5,0:5:85.61:136,0,86	0/1:10,0:9:10.37:19,0,10	1/1:13,0:9:8.72:53,9,0	./.	./.	0/1:16,0:14:6.26:6,0,105	./.	0/1:10,0:10:99:244,0,244	0/1:10,0:9:99:135,0,134	0/0:3,0:2:3.90:0,4,42
chr10	28618065	.	T	TCACACACACACACACACA	7439.34	PASS	AB=0.889;AC=43;AF=0.860;AN=50;BaseQRankSum=1.426;DP=355;FS=28.013;HRun=0;HaplotypeScore=135.8969;InbreedingCoeff=0.3707;MQ=45.79;MQ0=20;MQRankSum=-3.562;QD=28.39;ReadPosRankSum=0.587;VQSLOD=2.3937;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:20:6.02:330,6,0	1/1:5,0:5:3.01:223,3,0	0/0:23,0:13:32.98:0,33,1135	0/0:19,0:16:42.14:0,42,1726	0/0:8,1:8:0.47:0,0,1	1/1:15,0:15:5.75:258,6,0	1/1:20,0:18:8.37:336,8,0	1/1:16,0:14:33.09:811,33,0	1/1:5,3:8:3.01:238,3,0	1/1:10,0:9:21.06:925,21,0	./.	1/1:11,0:10:6.02:292,6,0	1/1:8,0:11:2.79:228,3,0	1/1:4,0:4:6.02:248,6,0	1/1:14,0:13:6.02:213,6,0	1/1:12,0:12:8.70:307,9,0	1/1:3,2:7:8.18:120,8,0	1/1:10,0:8:10.74:409,11,0	1/1:8,0:8:18.06:688,18,0	1/1:11,0:10:2.68:73,3,0	0/1:14,0:12:9.25:48,0,9	1/1:15,0:15:11.02:79,11,0	./.	1/1:16,0:14:3.93:24,4,0	./.	1/1:13,0:13:26.26:1034,26,0	1/1:10,0:11:8.48:435,8,0	1/1:3,0:3:3.01:121,3,0
chr10	28622658	.	CA	C	3538.70	PASS	AB=0.720;AC=38;AF=0.679;AN=56;BaseQRankSum=3.071;DP=669;FS=2.141;HRun=16;HaplotypeScore=80.0944;InbreedingCoeff=0.0439;MQ=65.74;MQ0=1;MQRankSum=3.570;QD=5.71;ReadPosRankSum=4.563;VQSLOD=2.9372;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:20,17:45:20.36:295,20,0	1/1:3,7:12:18.74:101,19,0	0/1:9,0:7:9.75:10,0,19	0/0:10,0:7:2.80:0,3,13	0/1:15,12:31:15.03:136,0,15	1/1:3,18:21:41.14:251,41,0	1/1:11,16:29:39.24:226,39,0	1/1:15,16:33:11.06:216,11,0	0/1:19,9:31:12.44:136,0,12	0/1:13,7:24:1.77:83,0,2	0/1:13,4:19:27.49:48,0,27	0/1:13,3:19:10.22:35,0,10	1/1:15,12:28:22.16:129,22,0	0/1:21,9:30:11.17:57,0,11	1/1:16,20:40:34.83:287,35,0	0/1:9,22:35:1.64:175,0,2	0/0:4,1:16:11.62:0,12,70	0/0:9,0:23:26.22:0,26,167	0/1:17,8:26:28.91:143,0,29	1/1:9,10:21:1.33:105,1,0	1/1:10,17:29:38.95:227,39,0	0/1:6,9:16:0.79:95,0,1	1/1:10,9:20:33.32:189,33,0	1/1:4,14:20:33.34:191,33,0	1/1:8,13:25:30.58:155,31,0	0/1:15,7:25:3.84:80,0,4	0/1:11,11:26:30.86:108,0,31	1/1:1,3:5:10.86:60,11,0
chr10	28624500	.	TTCCCC	T	10714.89	PASS	AB=0.647;AC=47;AF=0.839;AN=56;BaseQRankSum=-2.603;DP=494;FS=28.454;HRun=0;HaplotypeScore=98.8062;InbreedingCoeff=0.7704;MQ=73.97;MQ0=10;MQRankSum=-0.491;QD=28.20;ReadPosRankSum=4.212;VQSLOD=2.9365;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:14,10:24:39.06:639,39,0	1/1:7,5:12:9.03:174,9,0	0/0:44,0:20:28.15:0,28,209	0/0:52,0:21:21.72:0,22,246	1/1:7,9:16:42.06:729,42,0	1/1:12,5:17:30.08:497,30,0	1/1:7,13:20:21.07:405,21,0	1/1:16,12:25:34.39:548,34,0	1/1:8,5:13:24.03:393,24,0	1/1:6,3:9:18.04:256,18,0	1/1:8,8:16:30:483,30,0	1/1:5,16:21:36.12:695,36,0	1/1:7,12:19:45.08:765,45,0	1/1:10,3:13:21.04:321,21,0	1/1:11,5:16:27.08:470,27,0	1/1:9,9:18:33.06:566,33,0	0/0:8,0:8:21.04:0,21,541	0/0:8,0:8:9.03:0,9,262	0/1:5,6:10:43.13:290,0,43	1/1:8,1:9:11.88:122,12,0	1/1:29,4:33:6.19:658,6,0	1/1:7,10:17:24.08:463,24,0	1/1:4,8:12:33.08:569,33,0	1/1:9,8:17:30.08:514,30,0	1/1:2,4:6:9.03:174,9,0	1/1:8,0:8:8.95:94,9,0	1/1:10,8:18:39.11:662,39,0	1/1:4,3:7:12.04:230,12,0
chr10	28624591	.	CT	C	13313.66	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=7.653;DP=484;FS=22.566;HRun=4;HaplotypeScore=88.9664;InbreedingCoeff=0.9926;MQ=75.54;MQ0=0;MQRankSum=-4.424;QD=30.75;ReadPosRankSum=3.716;VQSLOD=3.1169;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,22:23:63.19:732,63,0	1/1:0,5:5:15.04:175,15,0	0/0:10,0:10:30.10:0,30,404	0/0:10,0:10:18.06:0,18,251	1/1:0,18:18:48.14:557,48,0	1/1:2,15:17:45.13:519,45,0	1/1:1,22:23:60.18:696,60,0	1/1:7,30:37:86.86:991,87,0	1/1:0,13:13:39.12:452,39,0	1/1:1,19:20:57.14:641,57,0	1/1:0,18:18:54.16:626,54,0	1/1:0,25:25:69.20:800,69,0	1/1:2,16:18:48.14:557,48,0	1/1:2,16:18:45.13:522,45,0	1/1:0,17:17:48.14:556,48,0	1/1:0,12:12:27.08:315,27,0	0/0:18,0:18:54.15:0,54,728	0/0:13,0:13:39.13:0,39,546	1/1:2,12:14:36.11:420,36,0	1/1:1,14:15:29.95:361,30,0	1/1:1,14:15:42.12:487,42,0	1/1:1,19:20:52.03:591,52,0	1/1:2,16:18:34.05:507,34,0	1/1:0,24:24:66.20:765,66,0	1/1:0,13:13:39.11:451,39,0	1/1:0,14:14:39.12:456,39,0	1/1:0,21:21:57.04:659,57,0	1/1:1,14:15:42.11:478,42,0
chr10	28624779	.	C	CCG	6224.72	PASS	AB=0.589;AC=46;AF=0.821;AN=56;BaseQRankSum=-1.809;DP=551;FS=0.000;HRun=0;HaplotypeScore=79.0987;InbreedingCoeff=0.6695;MQ=72.69;MQ0=15;MQRankSum=-1.161;QD=13.68;ReadPosRankSum=1.783;VQSLOD=4.6489;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:33,0:33:74.36:579,74,0	1/1:4,0:4:8.88:74,9,0	0/0:29,0:20:50.98:0,51,498	0/0:23,0:17:38.18:0,38,417	1/1:10,0:10:23.92:221,24,0	1/1:24,0:24:52.50:413,53,0	0/1:7,19:27:6.43:49,0,6	1/1:26,0:26:68.05:508,68,0	0/1:6,11:17:1.71:69,0,2	1/1:19,0:16:37.21:301,37,0	1/1:15,0:14:17.96:146,18,0	1/1:5,19:24:2.91:56,3,0	1/1:12,0:12:29.81:226,30,0	1/1:16,0:16:34.21:341,34,0	1/1:4,12:16:3.01:56,3,0	1/1:1,13:14:3.01:56,3,0	0/0:28,0:28:68.04:0,68,509	0/0:16,0:15:32.82:0,33,264	1/1:18,0:18:44.80:359,45,0	1/1:12,0:12:29.88:265,30,0	1/1:39,0:37:87.01:706,87,0	1/1:22,0:21:56.82:452,57,0	1/1:12,0:11:23.69:200,24,0	1/1:6,33:39:16.05:345,16,0	1/1:12,0:12:22.10:202,22,0	1/1:20,0:20:44.35:375,44,0	1/1:1,9:10:6.02:108,6,0	1/1:2,11:13:9.03:120,9,0
chr10	28624780	.	CGTGT	C	235.25	PASS	AB=0.974;AC=5;AF=0.096;AN=52;BaseQRankSum=1.031;DP=551;FS=7.339;HRun=0;HaplotypeScore=99.5463;InbreedingCoeff=0.3913;MQ=70.50;MQ0=17;MQRankSum=-0.158;QD=2.87;ReadPosRankSum=2.296;VQSLOD=0.9662;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:33:15.52:0,16,304	0/0:4,0:4:3.01:0,3,66	./.	./.	0/0:10,0:10:5.84:0,6,83	0/0:24,0:24:21.06:0,21,310	0/0:28,0:27:14.77:0,15,233	0/0:25,0:25:3.01:0,3,30	0/0:16,0:17:14.45:0,14,262	0/0:21,0:17:12.51:0,13,203	0/0:14,0:13:12.02:0,12,164	0/0:23,0:23:12.79:0,13,231	0/0:13,0:13:12:0,12,178	0/0:17,0:17:8.56:0,9,106	0/0:16,0:16:6:0,6,77	0/0:14,0:13:6.02:0,6,124	1/1:22,6:28:14.88:193,15,0	1/1:10,4:15:12.03:148,12,0	0/0:18,0:18:9.48:0,9,122	0/0:12,0:12:9.50:0,10,185	0/1:37,1:36:10:10,0,517	0/0:22,0:21:17.64:0,18,267	0/0:13,0:11:2.82:0,3,38	0/0:37,0:39:32.35:0,32,605	0/0:12,0:12:3.01:0,3,59	0/0:21,0:21:13.80:0,14,111	0/0:10,0:10:9.03:0,9,171	0/0:13,0:13:3.48:0,3,55
chr10	28625183	.	GCACA	G	3593.47	PASS	AB=0.869;AC=45;AF=0.938;AN=48;BaseQRankSum=-2.513;DP=452;FS=12.125;HRun=0;HaplotypeScore=89.7308;InbreedingCoeff=0.0163;MQ=59.76;MQ0=14;MQRankSum=-1.714;QD=8.98;ReadPosRankSum=-0.196;VQSLOD=1.7812;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:31,0:31:9.46:106,9,0	./.	./.	./.	1/1:6,1:7:5.98:66,6,0	1/1:15,8:22:21.07:323,21,0	0/1:14,3:16:2.85:209,0,3	./.	1/1:14,4:18:15.05:230,15,0	1/1:9,0:12:6.48:56,6,0	1/1:10,0:13:6.01:56,6,0	1/1:10,5:15:15.05:231,15,0	1/1:10,3:16:14.15:275,14,0	1/1:8,2:10:11.52:128,12,0	1/1:9,4:13:15.05:222,15,0	1/1:6,7:14:33.08:431,33,0	1/1:23,0:25:14.60:139,15,0	1/1:23,0:16:9.01:84,9,0	1/1:23,0:20:0.47:1,0,0	1/1:12,2:14:8.99:111,9,0	1/1:19,0:18:3.01:46,3,0	0/1:9,1:10:0.94:57,0,1	1/1:9,2:11:9.03:139,9,0	0/1:23,4:28:0.67:127,0,1	1/1:14,0:15:9.48:85,9,0	1/1:12,1:13:11.98:118,12,0	1/1:11,7:19:11.61:308,12,0	1/1:3,1:4:3.01:46,3,0
chr10	28625270	.	A	ATTT	6611.31	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=0.489;DP=448;FS=3.775;HRun=9;HaplotypeScore=139.6010;InbreedingCoeff=0.9534;MQ=72.86;MQ0=1;MQRankSum=-6.519;QD=15.52;ReadPosRankSum=2.869;VQSLOD=1.7823;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,0:17:37.15:344,37,0	1/1:3,0:9:16.88:122,17,0	0/0:12,0:13:14.45:0,14,277	0/0:9,0:9:21.06:0,21,256	1/1:9,0:19:41.89:378,42,0	1/1:4,0:16:37.12:287,37,0	1/1:4,0:18:34.12:255,34,0	1/1:13,1:31:59.76:493,60,0	1/1:5,0:15:20.93:165,21,0	1/1:2,0:8:23.92:197,24,0	1/1:1,1:13:38.79:294,39,0	1/1:3,0:21:37.90:282,38,0	1/1:1,0:18:34.92:264,35,0	1/1:0,0:9:16.19:117,16,0	1/1:2,0:21:44.32:326,44,0	1/1:8,0:21:32.90:276,33,0	1/1:3,0:19:19.16:54,19,0	1/1:4,0:18:13.71:30,14,0	1/1:11,0:18:35.93:321,36,0	1/1:3,0:9:23.96:232,24,0	1/1:4,0:13:20.61:128,21,0	1/1:4,0:10:25.94:205,26,0	1/1:0,0:9:20.88:154,21,0	1/1:1,0:19:44.65:337,45,0	1/1:8,0:17:46.97:422,47,0	1/1:3,0:17:37.90:284,38,0	1/1:6,0:21:44.85:350,45,0	1/1:2,0:18:37.13:296,37,0
chr10	28625411	.	AAT	A	2168.23	PASS	AB=1.000;AC=46;AF=0.821;AN=56;BaseQRankSum=10.658;DP=611;FS=46.452;HRun=0;HaplotypeScore=198.5472;InbreedingCoeff=0.7333;MQ=79.15;MQ0=0;MQRankSum=-3.355;QD=4.10;ReadPosRankSum=7.040;VQSLOD=1.1132;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,1:13:5.86:48,6,0	0/1:9,0:9:7.84:8,0,34	0/0:28,0:25:19.81:0,20,694	0/0:19,0:17:21.22:0,21,226	1/1:35,0:35:33.95:195,34,0	1/1:30,1:31:37.99:197,38,0	1/1:18,1:19:26.77:94,27,0	1/1:25,0:25:23.85:109,24,0	1/1:22,1:23:36.37:128,36,0	1/1:25,0:25:11.52:90,12,0	1/1:20,1:21:31.71:104,32,0	1/1:25,0:25:11.23:76,11,0	1/1:26,0:26:31.16:88,31,0	1/1:18,1:19:30.66:104,31,0	1/1:24,0:24:35.31:108,35,0	1/1:24,0:24:34.54:86,35,0	0/0:19,0:19:57.20:0,57,1154	0/0:16,0:16:48.09:0,48,882	1/1:22,0:22:40.61:149,41,0	1/1:24,0:24:17.46:89,17,0	0/1:13,0:13:20.53:40,0,21	1/1:15,0:15:25.66:85,26,0	1/1:28,0:28:39.48:121,39,0	1/1:15,0:15:23.09:74,23,0	1/1:19,0:19:24.59:59,25,0	1/1:29,0:29:17.45:87,17,0	1/1:32,1:33:21.84:119,22,0	1/1:12,0:12:21.13:85,21,0
chr10	28625412	.	AT	A	20818.24	PASS	AB=0.947;AC=49;AF=0.875;AN=56;BaseQRankSum=5.086;DP=603;FS=0.000;HRun=1;HaplotypeScore=120.0829;InbreedingCoeff=0.8357;MQ=79.51;MQ0=0;MQRankSum=-5.069;QD=38.55;ReadPosRankSum=3.850;VQSLOD=4.4991;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,10:13:36.09:468,36,0	1/1:0,7:7:21.07:293,21,0	0/0:27,0:25:33.89:0,34,568	0/1:16,1:16:27.36:27,0,127	1/1:3,31:34:99:1327,99,0	1/1:9,23:32:96.09:1192,96,0	1/1:1,17:18:51.16:696,51,0	1/1:0,25:25:75.19:993,75,0	1/1:1,22:23:69.23:956,69,0	1/1:0,24:24:72.23:988,72,0	1/1:1,20:21:63.20:863,63,0	1/1:1,24:25:72.24:986,72,0	1/1:5,21:26:75.25:1033,75,0	1/1:4,15:19:57.17:762,57,0	1/1:0,24:24:69.23:953,69,0	1/1:1,23:24:72.24:1006,72,0	0/0:19,0:19:57.19:0,57,895	0/0:16,0:16:48.09:0,48,693	1/1:1,21:22:66.20:899,66,0	1/1:2,22:24:69.23:956,69,0	1/1:2,10:12:33.11:458,33,0	1/1:0,15:15:45.15:628,45,0	1/1:0,27:27:75.19:1039,75,0	1/1:3,13:16:45.05:609,45,0	1/1:0,18:18:54.18:754,54,0	1/1:1,27:28:84.27:1160,84,0	1/1:3,30:33:96.30:1308,96,0	1/1:2,10:12:36.08:466,36,0
chr10	28625468	.	C	CA	11343.96	PASS	AB=1.000;AC=49;AF=0.875;AN=56;BaseQRankSum=-3.155;DP=522;FS=1.137;HRun=9;HaplotypeScore=85.1326;InbreedingCoeff=0.8747;MQ=73.36;MQ0=0;MQRankSum=-3.400;QD=24.61;ReadPosRankSum=-0.699;VQSLOD=5.0145;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,13:18:42.11:463,42,0	1/1:3,3:6:12.03:133,12,0	0/0:15,0:15:24.66:0,25,184	0/1:7,0:7:3.87:4,0,89	1/1:5,11:18:32.86:318,33,0	1/1:5,26:31:69.19:763,69,0	1/1:1,11:12:33.09:365,33,0	1/1:4,32:36:96.19:1023,96,0	1/1:6,14:20:48.09:517,48,0	1/1:7,12:19:36.10:398,36,0	1/1:2,9:11:24.06:265,24,0	1/1:3,18:21:54.15:597,54,0	1/1:3,24:27:69.07:722,69,0	1/1:4,18:22:51.09:545,51,0	1/1:6,31:37:78.18:850,78,0	1/1:6,16:22:25.06:492,25,0	0/0:25,0:25:65.48:0,65,572	0/0:21,0:21:53.99:0,54,469	1/1:6,12:18:31.40:438,31,0	1/1:3,6:9:18.05:199,18,0	1/1:2,10:12:27.07:299,27,0	1/1:2,10:12:30.04:318,30,0	1/1:5,10:15:30:305,30,0	1/1:2,12:14:30.08:332,30,0	1/1:2,11:13:33.08:357,33,0	1/1:4,18:22:54.13:587,54,0	1/1:7,19:26:66.18:729,66,0	1/1:3,10:13:30.07:325,30,0
chr10	28625795	.	G	GATATATATAT	1085.76	PASS	AB=1.000;AC=24;AF=0.923;AN=26;BaseQRankSum=-3.019;DP=161;FS=14.832;HRun=0;HaplotypeScore=52.1225;InbreedingCoeff=-0.0114;MQ=77.87;MQ0=0;MQRankSum=-3.019;QD=10.75;ReadPosRankSum=0.335;VQSLOD=0.1904;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:7,0:7:2.99:23,3,0	./.	0/1:11,0:11:6.90:7,0,104	0/1:14,0:13:1.40:1,0,101	./.	1/1:6,0:6:3.01:46,3,0	1/1:4,0:4:3.01:49,3,0	1/1:10,0:10:3.01:55,3,0	1/1:2,0:2:6.01:74,6,0	./.	1/1:5,0:5:3:26,3,0	1/1:5,0:5:3.01:49,3,0	./.	./.	./.	./.	1/1:4,5:11:9.03:457,9,0	1/1:5,1:12:9.03:336,9,0	./.	./.	./.	1/1:6,0:6:3:25,3,0	./.	./.	1/1:8,0:8:3:26,3,0	./.	./.	./.
chr10	28625809	.	T	TTA	1599.40	PASS	AB=1.000;AC=39;AF=0.848;AN=46;BaseQRankSum=0.391;DP=95;FS=41.137;HRun=0;HaplotypeScore=35.1613;InbreedingCoeff=0.4712;MQ=100.79;MQ0=0;MQRankSum=-2.168;QD=23.87;ReadPosRankSum=-3.774;VQSLOD=1.4544;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,0:3:3.01:36,3,0	1/1:2,2:4:9.03:136,9,0	0/0:9,0:9:17.64:0,18,225	0/1:12,0:11:4.74:5,0,118	1/1:1,1:2:3:25,3,0	1/1:3,0:3:6.91:94,7,0	1/1:1,0:1:0.47:1,0,0	1/1:1,0:1:2.22:7,2,0	1/1:4,0:4:6.49:76,6,0	1/1:2,0:2:6.02:111,6,0	1/1:4,0:4:9.03:140,9,0	1/1:1,0:1:0.47:1,0,0	./.	1/1:1,1:2:6.02:88,6,0	./.	1/1:3,0:3:9.03:156,9,0	0/0:11,0:11:16.25:0,16,136	0/0:5,0:5:7.77:0,8,30	1/1:2,0:2:3.01:41,3,0	1/1:3,1:4:12.04:175,12,0	./.	1/1:4,0:4:9.02:130,9,0	1/1:4,0:4:9.03:154,9,0	./.	1/1:4,3:7:15.02:173,15,0	1/1:1,0:1:3.01:37,3,0	1/1:1,2:3:9.03:147,9,0	./.
chr10	28625909	.	A	ATTTT	5628.78	PASS	AB=1.000;AC=49;AF=0.875;AN=56;BaseQRankSum=-0.002;DP=290;FS=30.903;HRun=14;HaplotypeScore=85.8773;InbreedingCoeff=0.6225;MQ=60.86;MQ0=11;MQRankSum=-5.298;QD=24.37;ReadPosRankSum=-0.244;VQSLOD=1.3450;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,2:14:30.10:440,30,0	1/1:2,0:4:9.03:135,9,0	0/1:8,0:6:21.98:22,0,46	0/0:15,0:9:4.85:0,5,58	1/1:3,3:9:18.42:245,18,0	1/1:7,2:11:21.06:322,21,0	1/1:4,0:6:13.20:139,13,0	1/1:9,2:9:16.24:238,16,0	1/1:7,1:9:21.03:281,21,0	1/1:4,3:9:13.18:252,13,0	1/1:6,4:14:30:477,30,0	1/1:6,0:5:11.98:124,12,0	1/1:6,1:10:26.99:326,27,0	1/1:2,0:2:3.01:31,3,0	1/1:8,2:10:18.04:267,18,0	1/1:2,3:7:18.05:293,18,0	0/0:20,0:22:44.38:0,44,483	0/0:14,0:20:14.44:0,14,168	1/1:9,2:11:17.10:220,17,0	1/1:8,3:12:9.03:167,9,0	1/1:3,3:5:9.03:166,9,0	1/1:8,1:12:26.82:315,27,0	1/1:5,2:10:20.98:322,21,0	1/1:7,3:9:6.49:130,6,0	1/1:6,2:9:14.97:208,15,0	1/1:5,1:5:9:114,9,0	1/1:2,2:5:12.02:184,12,0	1/1:8,1:11:20.79:211,21,0
chr10	28626602	.	A	AC	8473.15	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-9.457;DP=374;FS=29.336;HRun=6;HaplotypeScore=38.4661;InbreedingCoeff=0.8490;MQ=79.03;MQ0=0;MQRankSum=-2.254;QD=29.22;ReadPosRankSum=1.177;VQSLOD=2.7392;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,18:24:54.17:679,54,0	1/1:0,2:2:6.02:75,6,0	0/0:8,0:8:11.93:0,12,108	0/0:14,0:14:31.53:0,32,313	1/1:0,5:5:15.05:189,15,0	1/1:1,6:7:18.06:226,18,0	1/1:3,35:38:90.29:1132,90,0	1/1:3,12:16:30.08:363,30,0	1/1:1,16:17:39.12:491,39,0	1/1:0,5:5:15.05:189,15,0	1/1:1,4:5:12.04:151,12,0	1/1:2,11:13:21.07:264,21,0	1/1:1,11:12:36.09:438,36,0	1/1:0,15:15:39.12:491,39,0	1/1:0,6:6:18.06:226,18,0	1/1:0,4:4:12.04:151,12,0	0/0:31,0:31:84.17:0,84,849	0/0:31,0:31:90.12:0,90,896	1/1:1,11:12:30.10:377,30,0	1/1:2,3:5:9.03:113,9,0	1/1:8,33:41:56.79:1025,57,0	1/1:0,6:6:12.04:150,12,0	1/1:3,5:8:18.05:211,18,0	1/1:2,23:25:63.20:792,63,0	1/1:1,8:9:14.86:188,15,0	1/1:0,11:11:33.11:415,33,0	1/1:1,2:3:9.01:99,9,0	1/1:0,1:1:3.01:38,3,0
chr10	28627206	.	AG	A	12383.17	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=8.533;DP=535;FS=18.399;HRun=6;HaplotypeScore=57.9271;InbreedingCoeff=0.9413;MQ=79.86;MQ0=0;MQRankSum=-4.526;QD=28.21;ReadPosRankSum=2.341;VQSLOD=3.3021;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,32:36:99:1063,99,0	1/1:0,8:8:24.06:258,24,0	0/0:16,0:16:31.18:0,31,432	0/0:18,0:15:41.04:0,41,456	1/1:0,3:3:6.01:64,6,0	1/1:3,16:19:42.11:451,42,0	1/1:3,40:43:99:1225,114,0	1/1:3,17:20:48.12:516,48,0	1/1:1,13:14:33.08:355,33,0	1/1:1,15:16:39.08:409,39,0	1/1:0,5:5:15.04:161,15,0	1/1:3,27:30:75.19:806,75,0	1/1:0,11:11:33.08:355,33,0	1/1:0,21:21:57.14:612,57,0	1/1:0,11:11:30.07:322,30,0	1/1:1,15:16:39.10:419,39,0	0/0:32,0:32:87.25:0,87,1113	0/0:30,0:29:84.25:0,84,1072	1/1:3,14:17:42.09:443,42,0	1/1:1,3:4:9.02:95,9,0	1/1:1,68:69:99:2027,189,0	1/1:3,5:8:21.05:224,21,0	1/1:0,4:4:12.03:129,12,0	1/1:3,22:25:63.16:677,63,0	1/1:0,12:12:36.09:386,36,0	1/1:0,23:23:69.17:741,69,0	1/1:1,15:16:36.09:387,36,0	1/1:0,8:8:24.06:258,24,0
chr10	28630356	.	TCTACAA	T	17876.56	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=10.252;DP=580;FS=11.063;HRun=0;HaplotypeScore=282.8678;InbreedingCoeff=0.9936;MQ=67.20;MQ0=1;MQRankSum=-12.058;QD=34.85;ReadPosRankSum=1.961;VQSLOD=3.1343;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,27:34:62.24:864,62,0	1/1:1,9:10:24.54:439,25,0	0/0:18,0:17:46.40:0,46,1525	0/0:13,0:13:35.82:0,36,974	1/1:5,17:22:30.93:494,31,0	1/1:4,11:15:32.99:484,33,0	1/1:7,8:15:29:348,29,0	1/1:10,11:21:62.93:900,63,0	1/1:7,17:24:48.41:698,48,0	1/1:5,16:21:60.08:1076,60,0	1/1:7,15:22:35.18:398,35,0	1/1:9,24:33:64.53:1091,65,0	1/1:2,21:23:66.14:1243,66,0	1/1:6,20:26:57.57:965,58,0	1/1:4,24:28:51.41:874,51,0	1/1:3,23:26:70.87:1223,71,0	0/0:24,0:24:72.25:0,72,2583	0/0:12,0:12:36.12:0,36,1303	1/1:5,10:15:39.08:694,39,0	1/1:3,17:20:46.01:780,46,0	1/1:8,5:13:14.74:115,15,0	1/1:1,22:23:61.86:960,62,0	1/1:0,17:17:40.42:543,40,0	1/1:8,17:25:24.73:341,25,0	1/1:6,14:20:48.54:759,49,0	1/1:5,14:19:56.96:934,57,0	1/1:8,20:27:74.58:1182,75,0	1/1:3,10:13:31.27:472,31,0
chr10	28630363	.	GTATACTT	G	19944.17	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=11.180;DP=476;FS=1.607;HRun=0;HaplotypeScore=255.0120;InbreedingCoeff=0.9779;MQ=71.80;MQ0=1;MQRankSum=-11.771;QD=48.64;ReadPosRankSum=2.278;VQSLOD=4.7860;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:28:80.92:1099,81,0	1/1:9,0:9:23.87:468,24,0	0/0:18,0:17:48.16:0,48,1949	0/0:13,0:13:35.20:0,35,1194	1/1:17,0:17:38.62:602,39,0	1/1:12,0:12:35.84:578,36,0	1/1:8,0:8:24.07:393,24,0	1/1:11,6:17:51.16:973,51,0	1/1:18,0:18:53.62:831,54,0	1/1:16,0:16:48.16:1077,48,0	1/1:15,0:15:38.67:509,39,0	1/1:26,0:27:77.58:1312,78,0	1/1:22,0:22:65.89:1348,66,0	1/1:21,0:21:56.88:1054,57,0	1/1:25,0:25:57.15:1045,57,0	1/1:24,0:24:72.15:1394,72,0	0/0:23,0:23:69.24:0,69,2862	0/0:12,0:12:36.12:0,36,1453	1/1:12,0:12:12.26:648,12,0	1/1:17,0:17:47.86:856,48,0	1/1:6,0:6:10.47:106,10,0	1/1:22,0:22:65.88:1121,66,0	1/1:17,0:17:44.92:695,45,0	1/1:17,0:17:22.72:417,23,0	1/1:15,0:15:44.37:787,44,0	1/1:14,0:14:42.14:910,42,0	1/1:21,0:21:62.71:1202,63,0	1/1:10,0:10:29.82:520,30,0
chr10	28630365	.	ATACT	A	14207.30	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=11.894;DP=483;FS=1.583;HRun=0;HaplotypeScore=252.2865;InbreedingCoeff=0.9819;MQ=71.39;MQ0=1;MQRankSum=-12.742;QD=34.15;ReadPosRankSum=2.120;VQSLOD=4.8739;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,27:28:83.37:941,83,0	1/1:0,9:9:24.08:315,24,0	0/0:19,0:18:51.17:0,51,1369	0/0:12,0:12:20.27:0,20,739	1/1:0,17:17:36.58:443,37,0	1/1:0,11:11:33.09:408,33,0	1/1:1,8:9:26.94:307,27,0	1/1:6,11:17:48.12:606,48,0	1/1:1,17:18:54.15:667,54,0	1/1:1,16:17:46.39:684,46,0	1/1:1,15:16:34.03:396,34,0	1/1:3,24:27:78.24:1009,78,0	1/1:2,21:23:67.76:891,68,0	1/1:1,20:21:55.72:704,56,0	1/1:2,24:26:55.21:891,55,0	1/1:2,23:25:75.23:983,75,0	0/0:24,0:24:72.25:0,72,1927	0/0:12,0:12:36.12:0,36,959	1/1:2,10:12:15.12:415,15,0	1/1:0,17:17:44.63:562,45,0	1/1:1,5:6:11.03:133,11,0	1/1:0,22:22:63.34:742,63,0	1/1:0,15:15:40.88:475,41,0	1/1:1,17:18:22.99:285,23,0	1/1:1,14:15:44.63:550,45,0	1/1:2,14:16:47.18:618,47,0	1/1:1,20:21:62:801,62,0	1/1:0,10:10:30.09:384,30,0
chr10	28630370	.	T	TGTAG	17301.90	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=10.838;DP=597;FS=4.482;HRun=0;HaplotypeScore=282.7358;InbreedingCoeff=0.9947;MQ=69.22;MQ0=0;MQRankSum=-12.647;QD=33.02;ReadPosRankSum=0.561;VQSLOD=4.1377;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:32,0:32:86.13:1448,86,0	1/1:9,0:9:21.94:148,22,0	0/0:19,0:19:51.16:0,51,1033	0/0:14,0:14:22.23:0,22,627	1/1:20,1:21:36.62:510,37,0	1/1:13,0:13:34.36:525,34,0	1/1:10,2:14:23.22:434,23,0	1/1:27,0:27:79.87:1360,80,0	1/1:22,1:24:63.24:1037,63,0	1/1:19,1:21:61.42:574,61,0	1/1:15,1:16:31.01:520,31,0	1/1:27,3:30:79.12:1007,79,0	1/1:24,2:26:67.73:599,68,0	1/1:20,1:23:51.48:467,51,0	1/1:29,3:33:85.90:1333,86,0	1/1:24,2:28:72.59:773,73,0	0/0:28,0:28:78.25:0,78,1581	0/0:12,0:12:36.10:0,36,699	1/1:14,2:20:56.35:735,56,0	1/1:24,1:25:62.66:858,63,0	1/1:8,2:11:18.06:450,18,0	1/1:25,0:25:61.12:746,61,0	1/1:18,0:18:44.34:628,44,0	1/1:22,2:28:27.74:465,28,0	1/1:19,1:20:47.99:629,48,0	1/1:17,2:19:54.50:706,54,0	1/1:27,1:30:74.42:974,74,0	1/1:11,0:11:31.63:374,32,0
chr10	28631343	.	G	GT	16680.47	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-12.391;DP=737;FS=1.320;HRun=8;HaplotypeScore=63.9213;InbreedingCoeff=0.9849;MQ=70.50;MQ0=1;MQRankSum=-3.435;QD=27.03;ReadPosRankSum=2.479;VQSLOD=5.5893;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,42:46:68.61:1264,69,0	1/1:0,9:9:24.07:277,24,0	0/0:24,0:20:41.86:0,42,363	0/0:27,0:24:28.30:0,28,262	1/1:2,24:26:66.11:730,66,0	1/1:3,16:19:45.13:519,45,0	1/1:1,21:22:51.15:589,51,0	1/1:6,29:35:84.25:968,84,0	1/1:6,35:41:96.29:1107,96,0	1/1:4,23:27:69.19:783,69,0	1/1:0,14:14:39.55:436,40,0	1/1:6,22:28:63.19:727,63,0	1/1:3,19:22:54.16:623,54,0	1/1:3,13:16:42.12:482,42,0	1/1:6,35:41:99:1143,99,0	1/1:2,35:37:87.26:1004,87,0	0/0:36,0:36:99:0,108,983	0/0:32,0:33:89.04:0,89,794	1/1:6,13:18:11.35:345,11,0	1/1:4,27:31:78.19:885,78,0	1/1:5,23:28:63.19:727,63,0	1/1:1,16:17:39.11:447,39,0	1/1:6,16:22:45.13:519,45,0	1/1:3,26:29:51.58:807,52,0	1/1:2,22:24:51.15:589,51,0	1/1:2,22:24:66.17:741,66,0	1/1:4,25:29:69.21:796,69,0	1/1:3,8:11:15.04:173,15,0
chr10	28633469	.	G	GA	13481.88	PASS	AB=0.600;AC=47;AF=0.839;AN=56;BaseQRankSum=-12.861;DP=684;FS=1.401;HRun=9;HaplotypeScore=71.1529;InbreedingCoeff=0.8462;MQ=78.83;MQ0=2;MQRankSum=-3.941;QD=23.20;ReadPosRankSum=-0.095;VQSLOD=5.5289;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,43:53:94.11:1248,94,0	1/1:1,12:13:24.06:265,24,0	0/0:16,0:17:13.80:0,14,190	0/0:24,0:25:32.63:0,33,313	1/1:3,18:23:10.80:528,11,0	1/1:3,24:26:31.10:571,31,0	1/1:1,18:19:42.11:465,42,0	1/1:4,37:41:99:1201,111,0	1/1:2,25:28:47.18:558,47,0	1/1:7,23:30:49.13:757,49,0	1/1:2,18:20:54.06:570,54,0	0/1:9,18:27:3.94:417,0,4	1/1:6,14:20:4.03:273,4,0	1/1:3,26:29:66.18:730,66,0	1/1:1,16:17:33.09:365,33,0	1/1:4,24:28:56.21:658,56,0	0/0:29,0:29:78.43:0,78,674	0/0:29,0:29:65.98:0,66,573	1/1:6,18:24:31.05:549,31,0	1/1:3,20:24:59.94:628,60,0	1/1:1,16:17:36.10:398,36,0	1/1:5,20:25:51.14:564,51,0	1/1:2,10:13:27.48:284,27,0	1/1:3,15:18:13.05:372,13,0	1/1:1,14:16:39.10:428,39,0	1/1:3,23:28:71.85:750,72,0	1/1:8,20:28:27.48:537,27,0	1/1:1,11:12:33.09:365,33,0
chr10	28633837	.	TA	T	1736.37	PASS	AB=0.656;AC=32;AF=0.571;AN=56;BaseQRankSum=4.435;DP=609;FS=1.712;HRun=18;HaplotypeScore=68.9112;InbreedingCoeff=-0.1842;MQ=70.55;MQ0=4;MQRankSum=-0.326;QD=3.47;ReadPosRankSum=4.536;VQSLOD=-0.3412;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:19,24:44:2.63:137,0,3	0/1:5,6:12:6.35:51,0,6	0/0:25,0:8:2.94:0,3,19	0/0:26,0:14:9.35:0,9,55	1/1:7,13:24:19.61:151,20,0	1/1:7,4:14:17.53:79,18,0	0/1:9,4:17:24.07:80,0,24	0/1:15,9:26:32.68:86,0,33	0/1:14,7:24:39.72:40,0,41	0/1:20,3:28:15.93:58,0,16	0/1:11,5:23:17.46:68,0,17	1/1:4,7:14:5.39:89,5,0	1/1:8,6:14:11.26:61,11,0	1/1:9,1:15:6.59:26,7,0	0/1:6,14:21:11.12:98,0,11	0/1:9,7:18:1.66:67,0,2	0/0:25,1:33:13.61:0,14,255	0/0:19,1:24:15.66:0,16,220	0/1:11,10:24:30.26:93,0,30	0/1:9,6:20:29.70:77,0,30	0/1:10,13:27:10.53:85,0,11	1/1:6,10:16:3.21:101,3,0	0/1:6,13:19:4.90:60,0,5	1/1:10,5:19:25.78:124,26,0	0/1:9,10:22:39.29:52,0,39	0/1:10,16:27:27.69:117,0,28	0/1:13,9:22:15.35:57,0,15	1/1:6,3:9:7.63:44,8,0
chr10	28634332	.	TC	T	1262.73	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-6.015;DP=695;FS=0.000;HRun=1;HaplotypeScore=116.6754;InbreedingCoeff=0.9997;MQ=84.69;MQ0=0;MQRankSum=-1.670;QD=34.13;ReadPosRankSum=1.242;VQSLOD=3.2902;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:41:99:0,126,1960	0/0:10,0:10:30.09:0,30,457	0/0:29,0:29:82.99:0,83,1167	0/0:17,0:17:44.13:0,44,600	0/0:34,0:34:99:0,99,1574	0/0:24,0:24:72.23:0,72,1120	0/0:28,0:28:84.27:0,84,1311	0/0:32,0:32:93.30:0,93,1445	0/0:27,0:27:81.28:0,81,1291	0/0:22,0:22:66.21:0,66,1031	0/0:26,0:26:78.25:0,78,1224	0/0:27,0:27:81.28:0,81,1295	0/0:24,0:24:72.25:0,72,1141	0/0:25,0:25:75.26:0,75,1198	0/0:33,0:33:99:0,99,1554	0/0:15,0:15:45.15:0,45,716	1/1:0,21:21:57.19:797,57,0	1/1:0,16:16:42.14:587,42,0	0/0:37,0:37:99:0,111,1768	0/0:25,0:25:75.26:0,75,1199	0/0:29,0:29:87.25:0,87,1335	0/0:22,0:22:66.23:0,66,1053	0/0:26,0:26:78.27:0,78,1242	0/0:16,0:16:48.16:0,48,767	0/0:20,0:20:60.20:0,60,957	0/0:26,0:26:78.27:0,78,1246	0/0:26,0:26:78.27:0,78,1242	0/0:16,0:16:48.16:0,48,767
chr10	28635260	.	C	CGT	3067.98	PASS	AB=0.833;AC=37;AF=0.740;AN=50;BaseQRankSum=-3.009;DP=598;FS=11.259;HRun=0;HaplotypeScore=114.1086;InbreedingCoeff=-0.4331;MQ=69.72;MQ0=7;MQRankSum=1.094;QD=5.79;ReadPosRankSum=0.340;VQSLOD=2.2799;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:29:26.51:39,0,27	1/1:7,0:7:5.99:62,6,0	./.	./.	0/1:18,1:19:33.02:33,0,64	1/1:13,9:22:6:89,6,0	1/1:25,0:29:11.99:104,12,0	./.	0/1:14,6:20:43.71:201,0,44	0/1:18,4:23:23.48:80,0,23	0/1:8,2:10:23.40:59,0,23	0/1:15,6:22:20.47:122,0,20	0/1:14,8:24:52.01:231,0,52	1/1:4,8:13:15.05:221,15,0	0/1:17,5:23:20.48:120,0,20	1/1:15,10:25:25.96:393,26,0	1/1:18,1:27:2.83:44,3,0	1/1:21,0:21:12.02:138,12,0	0/1:21,1:23:26.49:39,0,26	1/1:8,3:11:3.01:45,3,0	0/1:28,8:37:35.69:36,0,38	0/1:15,3:19:35.76:36,0,38	0/1:19,1:20:34.56:76,0,35	0/1:26,23:50:99:605,0,113	1/1:7,3:10:3.01:45,3,0	1/1:23,0:23:5.12:85,5,0	1/1:10,4:14:18.06:265,18,0	1/1:5,1:5:3.01:44,3,0
chr10	28635956	.	TACACCACACACACACACACACACACAC	T	20294.36	PASS	AB=0.573;AC=47;AF=0.839;AN=56;BaseQRankSum=10.173;DP=612;FS=5.890;HRun=0;HaplotypeScore=266.6768;InbreedingCoeff=0.6664;MQ=57.82;MQ0=67;MQRankSum=-7.528;QD=45.61;ReadPosRankSum=3.758;VQSLOD=3.2160;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:11,32:36:53.37:1745,0,53	1/1:3,7:10:12.04:865,12,0	0/0:59,0:25:62.16:0,62,797	0/0:48,0:23:55.79:0,56,981	1/1:5,16:16:9.03:397,9,0	1/1:2,14:16:21.07:1493,21,0	1/1:20,0:16:21.07:267,21,0	1/1:17,0:8:21.07:293,21,0	1/1:4,15:15:15.52:1083,16,0	1/1:3,10:10:8.27:503,8,0	1/1:2,12:13:15.05:670,15,0	1/1:5,19:22:21.07:1514,21,0	1/1:1,18:19:23.64:1709,24,0	1/1:1,14:15:18.06:1292,18,0	1/1:5,21:22:21.07:1514,21,0	1/1:1,27:28:21.07:1450,21,0	0/0:38,0:39:99:0,102,7277	0/0:21,0:21:61.76:0,62,4557	1/1:4,10:13:21.04:607,21,0	1/1:3,17:18:12.04:725,12,0	1/1:20,0:18:15.05:215,15,0	1/1:3,13:14:6.02:433,6,0	1/1:2,7:8:3.01:216,3,0	1/1:7,14:15:6.02:433,6,0	1/1:4,7:9:3.01:76,3,0	1/1:5,21:23:48.12:1483,48,0	1/1:0,14:15:18.06:1096,18,0	1/1:1,3:3:3.01:216,3,0
chr10	28635959	.	AC	A	2382.53	PASS	AC=46;AF=0.852;AN=54;BaseQRankSum=10.280;DP=598;FS=8.218;HRun=2;HaplotypeScore=168.7955;InbreedingCoeff=0.7467;MQ=56.04;MQ0=67;MQRankSum=-8.300;QD=5.66;ReadPosRankSum=4.902;VQSLOD=0.4584;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:35,6:34:22.16:174,22,0	1/1:8,0:8:11.36:57,11,0	0/0:57,0:23:62.03:0,62,738	0/0:48,0:23:53.52:0,54,644	1/1:21,0:16:3:27,3,0	1/1:16,0:15:19.84:98,20,0	1/1:1,19:16:21.07:267,21,0	1/1:5,12:8:21.07:263,21,0	1/1:17,2:15:14.20:71,14,0	1/1:13,0:10:12.16:105,12,0	1/1:13,1:13:5.68:28,6,0	1/1:22,0:20:19.89:99,20,0	1/1:19,1:19:22.63:113,23,0	1/1:15,1:15:16.70:79,17,0	1/1:25,0:21:19.89:99,20,0	1/1:29,0:28:19.72:96,20,0	0/0:40,0:40:99:0,104,1376	0/0:22,0:22:60.30:0,60,835	1/1:13,0:12:17.72:181,18,0	1/1:19,0:17:8.52:42,9,0	1/1:1,17:16:15.05:190,15,0	1/1:16,0:14:5.68:28,6,0	1/1:7,1:7:2.84:14,3,0	1/1:19,2:15:5.68:28,6,0	./.	1/1:26,0:23:41.26:398,41,0	1/1:15,0:15:14.24:71,14,0	1/1:4,0:3:2.84:14,3,0
chr10	28635960	.	CCA	C	1063.95	PASS	AB=0.924;AC=42;AF=0.955;AN=44;BaseQRankSum=6.917;DP=587;FS=3.581;HRun=0;HaplotypeScore=176.4730;InbreedingCoeff=-0.0139;MQ=56.06;MQ0=67;MQRankSum=-6.235;QD=2.53;ReadPosRankSum=2.188;VQSLOD=2.7274;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:38,0:34:17.60:70,18,0	1/1:7,0:7:11.36:56,11,0	./.	./.	1/1:16,0:16:2.84:14,3,0	1/1:15,0:15:19.89:97,20,0	./.	./.	1/1:17,0:15:14.68:70,15,0	1/1:10,0:10:5.68:28,6,0	1/1:13,0:12:5.68:28,6,0	1/1:19,0:19:19.89:97,20,0	1/1:20,0:19:22.65:111,23,0	1/1:16,0:15:16.58:78,17,0	1/1:21,0:21:19.89:97,20,0	1/1:28,0:28:19.64:94,20,0	0/1:35,5:40:20.44:20,0,332	0/1:21,1:23:8.17:8,0,188	1/1:11,0:10:5.68:28,6,0	1/1:17,0:17:8.52:42,9,0	./.	1/1:13,0:13:5.68:28,6,0	1/1:8,0:7:2.84:14,3,0	1/1:16,0:15:5.68:28,6,0	./.	1/1:21,0:21:14.20:70,14,0	1/1:15,0:15:14.20:70,14,0	1/1:4,0:3:2.84:14,3,0
chr10	28636382	.	C	CCT	20501.36	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-7.586;DP=531;FS=1.447;HRun=0;HaplotypeScore=67.4019;InbreedingCoeff=0.9821;MQ=87.72;MQ0=2;MQRankSum=-9.679;QD=42.62;ReadPosRankSum=5.042;VQSLOD=6.7416;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,25:29:59.90:1118,60,0	1/1:0,7:7:15.05:280,15,0	0/0:25,0:25:63.10:0,63,876	0/0:25,0:25:56.81:0,57,873	1/1:1,14:15:33.11:618,33,0	1/1:3,15:18:45.15:816,45,0	1/1:0,22:22:51.17:954,51,0	1/1:6,20:26:57.18:1008,57,0	1/1:1,20:21:54.19:1010,54,0	1/1:2,13:15:39.12:701,39,0	1/1:1,7:8:18.06:337,18,0	1/1:2,20:23:45.15:843,45,0	1/1:2,18:20:39.13:731,39,0	1/1:0,17:18:39.13:730,39,0	1/1:2,24:27:69.24:1283,69,0	1/1:1,25:25:50.70:954,51,0	1/1:2,36:39:99:1851,99,0	1/1:1,16:17:42.14:786,42,0	1/1:4,10:14:39.12:683,39,0	1/1:2,12:14:33.11:618,33,0	1/1:1,19:20:54.19:995,54,0	1/1:2,9:12:24.08:450,24,0	1/1:1,10:11:20.87:393,21,0	1/1:3,14:17:36.12:673,36,0	1/1:0,9:9:24.08:449,24,0	1/1:1,15:17:48.11:805,48,0	1/1:3,20:24:54.14:966,54,0	1/1:0,10:10:24.08:450,24,0
chr10	28636940	.	A	AAC	10557.09	PASS	AB=0.920;AC=51;AF=0.911;AN=56;BaseQRankSum=2.630;DP=627;FS=7.484;HRun=0;HaplotypeScore=172.2594;InbreedingCoeff=0.6712;MQ=70.33;MQ0=13;MQRankSum=-1.415;QD=19.99;ReadPosRankSum=3.325;VQSLOD=4.8753;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:16:10.57:282,11,0	1/1:6,0:6:15.04:177,15,0	0/0:48,1:27:13.90:0,14,363	0/0:50,0:36:35.92:0,36,504	1/1:22,0:22:41.99:423,42,0	1/1:26,0:25:45.54:487,46,0	1/1:21,0:19:36.03:373,36,0	1/1:21,0:21:39.09:409,39,0	1/1:14,0:14:21.46:222,21,0	1/1:25,0:25:58.25:573,58,0	1/1:23,2:25:2.61:384,3,0	1/1:28,0:28:53.15:481,53,0	1/1:16,0:15:10.81:219,11,0	1/1:19,0:19:38.52:355,39,0	1/1:15,0:15:38.98:397,39,0	1/1:27,0:27:63.12:693,63,0	0/1:21,2:21:26.90:576,0,27	1/1:9,4:13:30.10:463,30,0	1/1:18,0:17:27.06:287,27,0	1/1:22,0:22:41.38:483,41,0	1/1:18,0:16:34.45:315,34,0	1/1:24,0:23:54:561,54,0	1/1:28,0:28:56.50:513,57,0	1/1:33,0:32:47.74:417,48,0	1/1:22,0:22:50.28:474,50,0	1/1:21,0:20:43.96:419,44,0	1/1:19,0:18:38.10:424,38,0	1/1:5,0:5:12.04:148,12,0
chr10	28636952	.	C	CAG	17444.76	PASS	AB=1.000;AC=51;AF=0.911;AN=56;BaseQRankSum=-0.222;DP=583;FS=6.054;HRun=0;HaplotypeScore=140.2572;InbreedingCoeff=0.6866;MQ=58.45;MQ0=14;MQRankSum=-0.417;QD=34.68;ReadPosRankSum=2.647;VQSLOD=6.5759;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,7:14:5.95:461,6,0	1/1:3,3:6:15.05:287,15,0	0/0:38,0:17:24.58:0,25,480	0/0:41,1:28:36.85:0,37,613	1/1:11,11:22:42.14:742,42,0	1/1:16,9:24:51.94:835,52,0	1/1:13,7:18:36.12:647,36,0	1/1:15,8:23:42.75:801,43,0	1/1:8,4:12:23.92:393,24,0	1/1:15,11:26:67.48:1006,67,0	1/1:16,6:22:37.47:764,37,0	1/1:12,12:24:59.76:872,60,0	1/1:12,3:14:6.20:378,6,0	1/1:16,5:20:41.73:651,42,0	1/1:11,6:17:45.06:756,45,0	1/1:14,12:26:69.11:1223,69,0	0/1:15,0:16:57.93:263,0,58	1/1:8,0:12:10.84:208,11,0	1/1:9,6:14:36.04:568,36,0	1/1:12,8:19:50.65:818,51,0	1/1:14,4:16:36.57:575,37,0	1/1:12,11:22:57.04:992,57,0	1/1:18,10:28:57.01:913,57,0	1/1:18,11:27:53.67:766,54,0	1/1:8,11:19:48.12:789,48,0	1/1:12,8:19:50.98:800,51,0	1/1:9,11:19:41.91:707,42,0	1/1:3,3:6:12.04:230,12,0
chr10	28637004	.	C	CACACACACACACACACA	8959.21	PASS	AB=0.660;AC=49;AF=0.875;AN=56;BaseQRankSum=0.452;DP=588;FS=20.298;HRun=0;HaplotypeScore=226.1686;InbreedingCoeff=0.3518;MQ=46.75;MQ0=20;MQRankSum=-3.730;QD=17.13;ReadPosRankSum=0.135;VQSLOD=2.0461;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:20:8.76:66,9,0	1/1:0,0:5:6.02:265,6,0	0/0:25,0:13:38.75:0,39,819	0/0:38,0:21:27.95:0,28,1241	1/1:1,11:27:3.01:235,3,0	1/1:1,0:26:6.02:149,6,0	1/1:1,0:22:3.48:109,3,0	1/1:0,0:17:45.15:1141,45,0	1/1:0,7:14:6.02:448,6,0	1/1:1,0:17:48.12:803,48,0	1/1:0,0:10:3.48:49,3,0	1/1:0,0:33:9.03:293,9,0	1/1:1,0:16:18.53:483,19,0	1/1:6,0:18:8.90:154,9,0	1/1:3,0:17:17.95:674,18,0	1/1:4,8:28:14.61:346,15,0	0/1:13,0:23:67.72:68,0,439	0/1:7,0:11:99:224,0,406	1/1:0,0:5:15.03:422,15,0	1/1:0,0:24:3.01:52,3,0	1/1:0,0:10:6.02:128,6,0	0/1:0,6:16:0:0,0,0	1/1:1,13:26:0.47:1,0,0	1/1:6,0:27:4.40:116,4,0	1/1:1,0:22:6.93:108,7,0	1/1:1,7:24:57.66:1816,58,0	1/1:0,12:29:9.10:328,9,0	1/1:0,0:7:21.07:482,21,0
chr10	28637301	.	G	GA	11464.29	PASS	AB=0.748;AC=51;AF=0.911;AN=56;BaseQRankSum=-7.066;DP=630;FS=12.255;HRun=11;HaplotypeScore=68.0511;InbreedingCoeff=0.3419;MQ=75.17;MQ0=0;MQRankSum=-4.836;QD=18.89;ReadPosRankSum=3.073;VQSLOD=5.2837;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,35:45:99:938,101,0	1/1:0,5:5:15.02:147,15,0	0/0:23,0:23:29.81:0,30,230	0/1:15,0:15:5.87:6,0,106	0/1:8,13:21:10.41:263,0,10	1/1:6,24:30:25.68:624,26,0	1/1:4,17:22:24.65:407,25,0	1/1:4,19:25:56.23:587,56,0	1/1:2,19:22:27.70:448,28,0	1/1:10,15:25:4.61:396,5,0	1/1:6,11:17:6.66:235,7,0	1/1:8,19:27:39.08:396,39,0	1/1:2,13:16:44.91:435,45,0	1/1:1,23:24:51.10:518,51,0	1/1:7,24:31:39.89:586,40,0	1/1:4,21:25:36.88:555,37,0	1/1:6,28:34:75.10:750,75,0	1/1:3,18:21:44.91:457,45,0	1/1:5,11:15:12.72:275,13,0	1/1:6,10:18:36.55:314,37,0	1/1:4,10:14:6.83:251,7,0	1/1:2,15:19:44.75:420,45,0	1/1:9,24:33:30.84:495,31,0	1/1:5,14:20:1.45:364,1,0	1/1:4,14:19:41.90:401,42,0	1/1:6,14:21:24.66:403,25,0	1/1:8,23:30:28.60:634,29,0	0/1:4,6:10:2.19:162,0,2
chr10	28638571	.	CTCT	C	1139.64	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=3.554;DP=331;FS=8.620;HRun=0;HaplotypeScore=73.8778;InbreedingCoeff=0.8773;MQ=86.61;MQ0=1;MQRankSum=-3.283;QD=47.48;ReadPosRankSum=1.970;VQSLOD=5.4504;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:33.10:0,33,758	0/0:3,0:3:6.02:0,6,147	0/0:15,0:14:36.53:0,37,680	0/0:21,0:17:23.18:0,23,638	0/0:12,0:12:27.05:0,27,481	0/0:23,0:23:63.19:0,63,1397	0/0:12,0:12:33.11:0,33,811	0/0:25,0:25:72.23:0,72,1612	0/0:14,0:14:42.14:0,42,1014	0/0:18,0:18:54.19:0,54,1320	0/0:9,0:9:21.07:0,21,512	0/0:11,0:11:30.10:0,30,700	0/0:7,0:7:21.07:0,21,514	0/0:20,0:20:60.19:0,60,1412	0/0:9,0:9:24.07:0,24,540	0/0:7,0:7:21.07:0,21,510	1/1:0,9:9:27.09:481,27,0	1/1:0,15:15:42.14:780,42,0	0/0:12,0:12:36.12:0,36,886	0/0:8,0:8:24.08:0,24,584	0/0:5,0:5:9.03:0,9,215	0/0:5,0:5:9.03:0,9,192	0/0:9,0:9:24.08:0,24,583	0/0:6,0:6:15.05:0,15,369	0/0:11,0:11:33.11:0,33,783	0/0:12,0:12:33.11:0,33,808	0/0:11,0:11:30.10:0,30,719	0/0:8,0:8:21.07:0,21,465
chr10	28638648	.	A	AT	7035.55	PASS	AB=0.704;AC=46;AF=0.821;AN=56;BaseQRankSum=-2.682;DP=388;FS=1.325;HRun=10;HaplotypeScore=102.2296;InbreedingCoeff=0.4645;MQ=68.00;MQ0=2;MQRankSum=0.631;QD=20.57;ReadPosRankSum=0.713;VQSLOD=4.9487;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:6,6:12:22.13:196,0,22	1/1:2,3:6:12.03:128,12,0	0/0:18,0:13:4.93:0,5,84	0/1:22,0:14:9.36:9,0,67	1/1:6,15:21:20.46:414,20,0	1/1:8,11:20:42.03:419,42,0	1/1:2,10:12:23.75:256,24,0	1/1:4,16:20:48.12:512,48,0	0/1:4,10:14:13.18:284,0,13	1/1:7,12:19:36.08:377,36,0	1/1:6,9:15:24.06:255,24,0	1/1:4,7:11:21.05:224,21,0	1/1:0,8:8:21.05:223,21,0	1/1:3,5:8:9.02:96,9,0	1/1:2,5:7:15.04:164,15,0	1/1:1,10:11:30.08:320,30,0	0/0:14,0:14:32.92:0,33,266	0/0:14,0:14:35.92:0,36,292	1/1:1,16:17:48.12:512,48,0	0/1:5,16:21:22.77:397,0,23	1/1:1,4:5:9.91:98,10,0	1/1:2,6:8:18.05:192,18,0	1/1:2,9:11:21.05:224,21,0	1/1:2,9:11:24.06:256,24,0	1/1:5,7:12:21.05:224,21,0	1/1:2,20:22:35.56:583,36,0	1/1:5,17:23:47.95:493,48,0	1/1:1,5:6:18.01:181,18,0
chr10	28638709	.	TGC	T	5076.02	PASS	AB=0.833;AC=51;AF=0.911;AN=56;BaseQRankSum=2.005;DP=374;FS=3.796;HRun=0;HaplotypeScore=118.4580;InbreedingCoeff=0.6695;MQ=50.95;MQ0=20;MQRankSum=-4.194;QD=14.93;ReadPosRankSum=2.951;VQSLOD=4.7339;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:13:17.95:144,18,0	1/1:2,2:4:11.96:98,12,0	0/0:18,0:13:28.92:0,29,294	0/0:16,0:7:14.01:0,14,150	1/1:12,7:19:44.86:364,45,0	1/1:9,2:11:23.97:200,24,0	1/1:9,1:9:11.81:98,12,0	1/1:17,0:16:38.94:342,39,0	1/1:6,4:10:14.98:124,15,0	1/1:12,3:15:39.06:371,39,0	1/1:6,1:7:14.97:121,15,0	1/1:6,5:11:17.88:139,18,0	1/1:10,3:13:26.62:202,27,0	1/1:13,7:17:20.87:163,21,0	1/1:5,7:11:26.87:216,27,0	1/1:8,5:13:26.92:222,27,0	1/1:14,0:13:23.61:154,24,0	1/1:16,0:14:11.24:198,11,0	1/1:15,3:18:51.33:424,51,0	1/1:15,6:21:44.89:369,45,0	1/1:17,1:17:5.99:50,6,0	0/1:4,1:5:11.02:59,0,11	1/1:10,1:9:11.83:89,12,0	1/1:10,3:12:14.94:122,15,0	1/1:8,3:11:14.98:126,15,0	1/1:15,2:16:41.99:373,42,0	1/1:12,2:14:26.89:216,27,0	1/1:3,3:6:11.95:94,12,0
chr10	28638739	.	TGTGTGTGTGTGTGTGTGTGTGC	T	7868.22	PASS	AB=0.988;AC=43;AF=0.827;AN=52;BaseQRankSum=0.879;DP=386;FS=0.000;HRun=0;HaplotypeScore=210.1304;InbreedingCoeff=-0.0255;MQ=37.40;MQ0=40;MQRankSum=-1.011;QD=24.21;ReadPosRankSum=-2.156;VQSLOD=3.5311;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:22:2.40:129,2,0	1/1:8,0:8:10.84:383,11,0	./.	./.	1/1:12,1:13:24.07:1019,24,0	1/1:11,0:11:0.87:81,1,0	1/1:18,0:17:10.61:98,11,0	1/1:10,0:6:11.72:76,12,0	1/1:6,2:8:2.98:166,3,0	1/1:19,0:18:14.24:768,14,0	1/1:8,1:9:14.01:231,14,0	1/1:11,2:13:18.04:617,18,0	0/1:16,0:16:0.48:576,0,0	1/1:19,1:17:14.68:408,15,0	1/1:14,1:14:23.38:933,23,0	0/1:17,0:17:7.03:564,0,7	0/1:16,0:15:38.62:39,0,151	0/0:22,0:19:16.88:0,17,1270	0/1:12,0:10:28.37:28,0,29	1/1:8,1:8:6.68:536,7,0	1/1:18,0:17:12.02:74,12,0	1/1:3,1:4:6.89:192,7,0	1/1:9,0:7:11.93:89,12,0	1/1:16,0:15:6.35:32,6,0	0/1:10,1:11:13.64:275,0,14	1/1:13,0:12:3.82:130,4,0	0/1:12,0:12:9.83:384,0,10	0/1:6,0:5:20.35:40,0,20
chr10	28638741	.	TGTGTGTGTGTGTGTGTGTGC	T	6912.09	PASS	AB=0.928;AC=45;AF=0.804;AN=56;BaseQRankSum=0.487;DP=341;FS=4.362;HRun=0;HaplotypeScore=173.9286;InbreedingCoeff=-0.0890;MQ=37.43;MQ0=40;MQRankSum=1.225;QD=21.87;ReadPosRankSum=-2.920;VQSLOD=3.4430;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:20:3.66:67,4,0	1/1:5,2:7:8.98:326,9,0	1/1:15,0:1:2.04:6,2,0	0/0:25,0:2:2.94:0,3,18	1/1:5,5:10:24.05:850,24,0	1/1:10,0:10:13.20:109,13,0	1/1:16,0:15:17.61:108,18,0	0/1:12,0:8:0.41:94,0,0	1/1:5,0:5:3.01:157,3,0	1/1:16,2:17:22.99:652,23,0	0/1:9,0:9:6.31:172,0,6	1/1:9,3:12:19.47:533,19,0	0/1:6,3:9:3.87:480,0,4	1/1:10,5:12:0.46:313,0,0	1/1:9,6:14:25.96:773,26,0	1/1:11,2:13:13.41:463,13,0	0/1:16,0:15:39.88:40,0,103	0/1:22,0:19:14.85:15,0,973	0/1:9,0:7:6.84:7,0,22	0/1:6,2:7:19.53:447,0,20	1/1:17,0:16:8.41:120,8,0	1/1:4,0:4:9.47:208,9,0	1/1:7,0:5:8.90:54,9,0	1/1:12,1:12:6.90:74,7,0	0/1:10,0:10:33.11:333,0,33	1/1:12,0:11:9.54:127,10,0	0/1:6,2:8:7.85:343,0,8	1/1:4,0:3:2.42:40,2,0
chr10	28644652	.	TC	T	15547.01	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=7.172;DP=598;FS=6.718;HRun=4;HaplotypeScore=61.6411;InbreedingCoeff=0.9781;MQ=87.81;MQ0=0;MQRankSum=-6.630;QD=31.03;ReadPosRankSum=5.173;VQSLOD=4.9901;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,37:39:96.29:1151,96,0	1/1:0,3:3:9.03:108,9,0	0/0:20,0:20:57.18:0,57,751	0/0:22,0:22:60.62:0,61,782	1/1:0,8:8:15.05:180,15,0	1/1:0,19:19:39.12:467,39,0	1/1:1,24:25:63.19:756,63,0	1/1:0,26:26:78.21:906,78,0	1/1:0,23:23:63.19:755,63,0	1/1:0,16:16:47.88:552,48,0	1/1:0,8:8:21.06:252,21,0	1/1:0,25:25:69.21:828,69,0	1/1:0,24:24:57.05:684,57,0	1/1:0,25:25:66.20:792,66,0	1/1:1,22:23:60.18:720,60,0	1/1:1,19:20:51.16:612,51,0	0/0:33,0:33:99:0,99,1351	0/0:22,0:22:66.19:0,66,901	1/1:3,16:19:48.15:574,48,0	1/1:3,16:19:45.13:528,45,0	1/1:2,51:53:99:1726,144,0	1/1:1,10:11:27.08:324,27,0	1/1:0,15:15:38.78:467,39,0	1/1:0,39:39:99:1259,105,0	1/1:1,14:15:33.04:396,33,0	1/1:3,17:20:51.16:612,51,0	1/1:1,14:15:42.13:504,42,0	1/1:0,11:11:33.10:396,33,0
chr10	28645452	.	ACC	A	13386.29	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-3.986;DP=620;FS=6.866;HRun=11;HaplotypeScore=81.4789;InbreedingCoeff=0.9500;MQ=71.56;MQ0=3;MQRankSum=-3.542;QD=23.90;ReadPosRankSum=4.692;VQSLOD=4.5617;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,34:39:87.19:924,87,0	1/1:3,8:11:21.05:224,21,0	0/0:16,0:18:29.70:0,30,313	0/0:8,0:8:19.97:0,20,195	1/1:2,16:18:42.09:447,42,0	1/1:1,18:19:45.10:478,45,0	1/1:6,22:29:48.04:566,48,0	1/1:8,21:30:62.58:628,63,0	1/1:2,26:29:77.93:806,78,0	1/1:7,22:31:53.73:610,54,0	1/1:3,15:18:45.10:479,45,0	1/1:4,15:19:39.07:415,39,0	1/1:4,14:18:39.07:415,39,0	1/1:4,16:19:42.08:447,42,0	1/1:5,22:28:59.87:619,60,0	1/1:3,26:29:69.17:734,69,0	0/0:7,0:22:9.50:0,10,128	0/0:3,0:11:6.01:0,6,74	1/1:3,25:28:75.15:787,75,0	1/1:2,8:10:21:212,21,0	1/1:4,28:31:75.18:798,75,0	1/1:2,22:24:60.14:637,60,0	1/1:4,17:21:45.11:479,45,0	1/1:2,26:28:63.15:671,63,0	1/1:2,23:25:66.14:703,66,0	1/1:5,20:25:60.13:638,60,0	1/1:3,15:18:39.09:415,39,0	1/1:2,8:10:24.05:255,24,0
chr10	28645879	.	TG	T	9963.14	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=5.057;DP=629;FS=15.799;HRun=10;HaplotypeScore=89.6532;InbreedingCoeff=0.8878;MQ=74.14;MQ0=1;MQRankSum=-1.980;QD=18.87;ReadPosRankSum=4.001;VQSLOD=4.1026;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,20:27:45.54:548,46,0	1/1:0,8:8:20.99:182,21,0	0/0:20,0:19:24.14:0,24,233	0/0:22,0:21:28.28:0,28,281	1/1:2,19:21:53.73:455,54,0	1/1:7,14:21:41.99:365,42,0	1/1:4,23:27:47.97:417,48,0	1/1:3,15:18:11.77:327,12,0	1/1:6,13:19:35.99:312,36,0	1/1:9,16:25:47.90:413,48,0	1/1:6,8:14:23.98:208,24,0	1/1:6,22:30:64.05:530,64,0	1/1:4,18:22:44.99:391,45,0	1/1:3,21:24:65.99:573,66,0	1/1:4,27:31:41.80:592,42,0	1/1:3,14:17:38.99:339,39,0	0/0:37,1:38:72.53:0,73,963	0/0:19,1:20:25.08:0,25,505	1/1:5,9:14:4.03:208,4,0	1/1:4,8:12:20.99:181,21,0	1/1:7,37:44:80.32:837,80,0	1/1:5,18:23:4.85:419,5,0	1/1:6,12:18:5.74:270,6,0	1/1:4,16:20:44.98:390,45,0	1/1:4,21:25:65.98:573,66,0	1/1:6,20:26:68.98:599,69,0	1/1:9,24:33:52.41:602,52,0	1/1:1,8:9:26.99:234,27,0
chr10	28646859	.	G	GT	15368.57	PASS	AB=1.000;AC=49;AF=0.875;AN=56;BaseQRankSum=-9.586;DP=574;FS=3.919;HRun=6;HaplotypeScore=51.4678;InbreedingCoeff=0.7398;MQ=60.45;MQ0=5;MQRankSum=3.117;QD=30.49;ReadPosRankSum=1.048;VQSLOD=5.4745;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,27:32:69.18:850,69,0	1/1:0,6:6:15.05:189,15,0	0/0:15,0:10:0.04:0,0,146	0/1:13,0:6:10.83:11,0,77	1/1:5,31:35:93.25:1151,93,0	1/1:3,19:22:57.18:716,57,0	1/1:0,21:21:63.20:791,63,0	1/1:6,34:40:98.03:1168,98,0	1/1:3,18:22:51.13:620,51,0	1/1:1,17:17:51.16:640,51,0	1/1:3,19:22:57.18:709,57,0	1/1:1,15:16:42.13:528,42,0	1/1:3,12:15:13.82:392,14,0	1/1:1,13:14:36.11:449,36,0	1/1:3,24:27:69.22:862,69,0	1/1:1,15:16:45.14:566,45,0	0/0:35,0:35:92.49:0,92,947	0/0:20,0:20:48.10:0,48,488	1/1:6,13:18:14.64:474,15,0	1/1:3,13:16:39.09:473,39,0	1/1:0,13:13:39.12:490,39,0	1/1:1,15:16:42.13:510,42,0	1/1:1,21:22:57.18:714,57,0	1/1:0,17:17:42.13:527,42,0	1/1:1,14:15:42.13:527,42,0	1/1:2,19:21:39.66:694,40,0	1/1:5,31:36:84.27:1056,84,0	1/1:0,9:9:21.07:264,21,0
chr10	28647043	.	T	TAA	8311.29	PASS	AB=0.789;AC=50;AF=0.893;AN=56;BaseQRankSum=-4.811;DP=510;FS=1.884;HRun=12;HaplotypeScore=79.6375;InbreedingCoeff=0.4686;MQ=70.74;MQ0=3;MQRankSum=-2.374;QD=17.87;ReadPosRankSum=1.738;VQSLOD=4.2328;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:12,8:21:51.07:627,51,0	1/1:2,7:10:15.04:197,15,0	0/0:26,0:20:15.24:0,15,207	0/0:18,0:11:1.91:0,2,59	1/1:11,14:26:54.20:542,54,0	1/1:9,15:26:33.06:418,33,0	1/1:4,8:15:21.28:217,21,0	1/1:15,8:25:16.02:332,16,0	1/1:1,5:8:8.52:93,9,0	1/1:9,16:25:48.03:596,48,0	1/1:10,0:10:14.91:127,15,0	1/1:2,15:17:24.08:335,24,0	1/1:2,11:14:21.96:296,22,0	1/1:3,7:10:12.04:168,12,0	1/1:1,15:20:17.33:205,17,0	1/1:2,8:12:14.53:164,15,0	1/1:5,4:31:16.80:261,17,0	1/1:7,0:29:51.05:521,51,0	1/1:4,12:16:29.85:301,30,0	1/1:9,10:22:51.44:552,51,0	1/1:4,10:14:15.04:193,15,0	0/1:5,0:5:12.74:127,0,13	1/1:11,0:12:19.97:168,20,0	1/1:1,8:9:21.07:295,21,0	0/1:6,16:21:6.70:231,0,7	1/1:7,10:18:41.91:483,42,0	1/1:5,14:21:39.58:505,40,0	1/1:6,17:23:4.83:359,5,0
chr10	28648900	.	C	CCCTT	3228.29	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=0.877;DP=542;FS=0.566;HRun=0;HaplotypeScore=107.6747;InbreedingCoeff=0.9904;MQ=79.57;MQ0=0;MQRankSum=-3.623;QD=53.80;ReadPosRankSum=2.001;VQSLOD=5.0182;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,135,2478	0/0:9,0:9:27.06:0,27,522	0/0:14,0:14:36.95:0,37,542	0/0:15,0:15:29.54:0,30,509	0/0:14,0:14:42.01:0,42,797	0/0:13,0:13:39.13:0,39,789	0/0:32,0:32:93.25:0,93,1826	0/0:25,0:25:66.16:0,66,1166	0/0:16,0:16:39.13:0,39,795	0/0:14,0:14:36.02:0,36,578	0/0:7,0:7:21.07:0,21,426	0/0:23,0:23:69.11:0,69,1194	0/0:17,0:17:48.16:0,48,1000	0/0:22,0:22:57.20:0,57,1177	0/0:19,0:19:57.20:0,57,1179	0/0:18,0:18:51.16:0,51,997	1/1:4,34:39:87.30:2218,87,0	1/1:1,19:21:47.60:1132,48,0	0/0:12,0:11:29.84:0,30,576	0/0:9,0:9:21.07:0,21,421	0/0:36,0:36:99:0,105,1976	0/0:7,0:7:18.03:0,18,301	0/0:14,0:14:41.97:0,42,755	0/0:16,0:16:48.16:0,48,969	0/0:21,0:21:57.18:0,57,1125	0/0:17,0:17:47.74:0,48,894	0/0:17,0:17:47.97:0,48,890	0/0:28,0:28:78.27:0,78,1557
chr10	28649071	.	T	TACC	464.54	PASS	AB=0.659;AC=22;AF=0.393;AN=56;BaseQRankSum=2.713;DP=367;FS=13.941;HRun=0;HaplotypeScore=80.3460;InbreedingCoeff=-0.1619;MQ=81.11;MQ0=0;MQRankSum=-1.163;QD=2.12;ReadPosRankSum=2.613;VQSLOD=0.6394;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:10,0:21:45.87:46,0,89	0/1:8,0:8:40.20:40,0,77	0/0:17,0:17:39.19:0,39,436	0/0:12,0:13:36.60:0,37,429	0/1:2,0:8:26.22:74,0,26	1/1:1,0:11:7.08:32,7,0	0/1:4,0:17:22.56:23,0,75	0/0:14,0:14:18.38:0,18,154	0/1:2,0:9:8.94:60,0,9	0/1:7,0:12:13.23:13,0,138	0/1:1,0:7:0.20:0,0,12	0/0:5,0:18:0.65:0,1,43	1/1:3,0:8:4.83:41,5,0	0/1:5,1:21:31.51:67,0,32	0/1:8,0:15:25.32:25,0,64	0/1:6,0:10:22.60:23,0,106	0/0:22,0:21:57.04:0,57,544	0/0:18,0:18:50.77:0,51,466	0/1:6,0:16:63.80:64,0,121	0/0:1,0:4:5.93:0,6,43	0/0:5,0:22:0.83:0,1,77	0/0:4,0:8:8.47:0,8,63	1/1:1,0:3:2.95:34,3,0	0/1:10,0:21:17.32:17,0,125	0/0:7,0:12:12.34:0,12,85	0/1:5,0:14:32.67:33,0,97	0/1:10,0:14:7.33:7,0,152	1/1:0,0:4:4.78:25,5,0
chr10	28649079	.	C	CA	1363.03	PASS	AC=4;AF=0.074;AN=54;BaseQRankSum=-7.471;DP=397;FS=7.625;HRun=0;HaplotypeScore=95.1390;InbreedingCoeff=0.5067;MQ=77.57;MQ0=0;MQRankSum=-0.377;QD=32.45;ReadPosRankSum=5.860;VQSLOD=2.8663;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:19.95:0,20,122	0/0:7,0:7:3.63:0,4,10	0/0:16,0:16:35.69:0,36,357	0/0:11,0:11:25.25:0,25,241	0/0:11,0:11:6.56:0,7,36	0/0:15,0:15:8.90:0,9,53	0/0:18,0:18:7.03:0,7,71	0/0:17,0:17:16.53:0,17,128	0/0:12,0:12:6.56:0,7,30	0/0:12,0:12:5.50:0,5,37	0/0:9,0:9:6.52:0,7,32	0/0:20,0:20:9.76:0,10,68	0/0:12,0:12:10.43:0,10,70	0/0:27,0:27:17.45:0,17,112	0/0:16,0:16:8.71:0,9,56	0/0:10,0:10:17.55:0,18,123	1/1:1,23:23:54.18:770,54,0	1/1:2,16:18:51.16:710,51,0	0/0:12,0:12:12.89:0,13,91	./.	0/0:25,0:25:14.42:0,14,92	0/0:5,0:5:2.82:0,3,22	0/0:5,0:5:2.83:0,3,14	0/0:19,0:19:12.11:0,12,79	0/0:13,0:13:8.26:0,8,64	0/0:15,0:15:8.56:0,9,49	0/0:13,0:13:13.34:0,13,84	0/0:3,0:3:2.84:0,3,14
chr10	28650410	.	T	TAA	30941.45	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-7.060;DP=631;FS=13.918;HRun=1;HaplotypeScore=67.4659;InbreedingCoeff=0.9990;MQ=78.76;MQ0=0;MQRankSum=-8.136;QD=51.57;ReadPosRankSum=5.149;VQSLOD=3.4082;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,43:44:99:2253,111,0	1/1:0,11:11:30.10:609,30,0	0/0:15,0:14:42.12:0,42,633	0/0:16,0:15:34.91:0,35,543	1/1:1,29:31:87.30:1766,87,0	1/1:0,25:25:54.19:1096,54,0	1/1:0,19:19:54.19:1097,54,0	1/1:1,36:37:99:2110,108,0	1/1:0,23:24:60.21:1213,60,0	1/1:0,29:30:90.19:1629,90,0	1/1:0,32:33:93.06:1643,93,0	1/1:0,19:19:45.15:914,45,0	1/1:0,13:13:36.12:731,36,0	1/1:0,16:16:48.16:975,48,0	1/1:0,22:22:57.20:1158,57,0	1/1:0,15:15:45.15:914,45,0	1/1:0,26:27:69.24:1400,69,0	1/1:1,14:17:30.06:568,30,0	1/1:1,20:21:60.18:1125,60,0	1/1:0,23:23:69.07:1238,69,0	1/1:1,19:19:39.13:792,39,0	1/1:0,18:18:54.06:973,54,0	1/1:2,25:27:55.07:1099,55,0	1/1:0,12:12:30.10:609,30,0	1/1:0,21:21:45.15:914,45,0	1/1:0,31:32:96.25:1800,96,0	1/1:0,26:26:69.24:1401,69,0	1/1:0,15:17:45.15:914,45,0
chr10	28651307	.	C	CCACACACACA	30135.76	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-4.345;DP=706;FS=10.017;HRun=0;HaplotypeScore=219.4827;InbreedingCoeff=0.7233;MQ=53.65;MQ0=0;MQRankSum=-7.865;QD=47.23;ReadPosRankSum=3.815;VQSLOD=3.1658;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,14:24:20.73:905,21,0	1/1:16,8:24:22.66:921,23,0	0/0:20,0:18:35.91:0,36,618	0/0:35,0:32:46.54:0,47,1522	0/0:7,5:13:0.89:0,1,2	1/1:11,5:20:15.05:540,15,0	1/1:16,14:34:33.05:1504,33,0	1/1:29,0:29:65.57:1469,66,0	1/1:9,14:29:48.16:2280,48,0	1/1:13,13:27:48.16:1968,48,0	1/1:11,11:23:5.71:236,6,0	1/1:11,14:27:36.04:1537,36,0	1/1:14,17:35:51.16:2357,51,0	1/1:14,19:37:57.36:2636,57,0	1/1:11,18:31:35.81:1705,36,0	1/1:9,19:28:27.09:1368,27,0	1/1:16,13:29:30.06:1295,30,0	1/1:10,6:17:27.09:1206,27,0	1/1:5,11:17:42.14:1496,42,0	1/1:6,10:18:6.02:305,6,0	1/1:23,14:40:9.49:270,9,0	1/1:5,8:16:11.73:438,12,0	1/1:5,13:20:11.86:609,12,0	1/1:12,19:34:3.01:152,3,0	1/1:5,12:18:23.59:1157,24,0	1/1:13,12:32:72.23:2381,72,0	1/1:8,12:22:24.08:1096,24,0	1/1:1,2:3:6.02:305,6,0
chr10	28652152	.	GT	G	49.88	PASS	AB=0.767;AC=1;AF=0.018;AN=56;BaseQRankSum=3.152;DP=633;FS=1.270;HRun=5;HaplotypeScore=128.0719;InbreedingCoeff=-0.0188;MQ=67.97;MQ0=0;MQRankSum=-1.920;QD=1.51;ReadPosRankSum=-0.608;VQSLOD=-0.5518;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:39.43:0,39,499	0/0:7,0:7:18.06:0,18,245	0/1:23,10:25:99:124,0,472	0/0:31,2:30:49.27:0,49,939	0/0:18,0:18:45.15:0,45,609	0/0:13,0:13:24.08:0,24,322	0/0:25,0:25:68.96:0,69,915	0/0:40,0:40:99:0,117,1569	0/0:27,0:27:54.16:0,54,709	0/0:34,0:34:93.26:0,93,1231	0/0:16,0:16:48.14:0,48,607	0/0:20,0:20:36.57:0,37,454	0/0:17,0:17:30.08:0,30,382	0/0:21,0:21:42.14:0,42,562	0/0:21,0:21:54.17:0,54,711	0/0:27,0:26:60.20:0,60,797	0/0:29,0:29:63.15:0,63,812	0/0:21,0:21:52.66:0,53,717	0/0:26,0:26:69.23:0,69,934	0/0:25,0:25:75.25:0,75,1024	0/0:9,0:9:21.07:0,21,286	0/0:24,0:24:69.23:0,69,933	0/0:20,0:20:36.12:0,36,493	0/0:13,0:13:31.34:0,31,406	0/0:22,0:22:42.08:0,42,545	0/0:31,0:31:81.26:0,81,1076	0/0:28,0:27:36.12:0,36,490	0/0:9,0:9:26.76:0,27,339
chr10	28652165	.	T	TTGTATGTA	7654.57	PASS	AB=0.692;AC=51;AF=0.981;AN=52;BaseQRankSum=-1.049;DP=686;FS=0.000;HRun=0;HaplotypeScore=188.0910;InbreedingCoeff=-0.0660;MQ=60.20;MQ0=2;MQRankSum=-1.132;QD=12.29;ReadPosRankSum=2.090;VQSLOD=3.6724;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:14,7:27:37.26:235,0,37	1/1:3,4:8:3.01:122,3,0	./.	./.	1/1:9,0:22:13.18:120,13,0	1/1:8,10:20:3.01:122,3,0	1/1:26,0:26:23.98:343,24,0	1/1:50,0:49:31.80:243,32,0	1/1:11,15:30:12.04:488,12,0	1/1:20,0:42:35.27:500,35,0	1/1:17,0:17:18.05:279,18,0	1/1:3,14:20:15.05:610,15,0	1/1:7,8:17:12.04:486,12,0	1/1:10,10:23:12.04:486,12,0	1/1:8,12:23:21.05:757,21,0	1/1:10,14:26:21.05:757,21,0	1/1:16,0:31:8.99:80,9,0	1/1:21,0:22:21.29:155,21,0	1/1:15,0:18:11.92:91,12,0	1/1:12,0:26:16.22:143,16,0	1/1:9,0:10:6:67,6,0	1/1:7,0:22:26.89:216,27,0	1/1:13,8:25:3:122,3,0	1/1:13,0:13:6:73,6,0	1/1:7,0:29:6.02:208,6,0	1/1:16,0:33:45.38:374,45,0	1/1:7,18:30:9.03:367,9,0	1/1:10,0:9:17.98:210,18,0
chr10	28652586	.	AAAAG	A	1116.17	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=3.761;DP=629;FS=2.728;HRun=0;HaplotypeScore=124.8560;InbreedingCoeff=0.9447;MQ=71.89;MQ0=4;MQRankSum=-0.270;QD=31.89;ReadPosRankSum=3.641;VQSLOD=3.9080;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:49:99:0,125,3066	0/0:7,0:7:21.07:0,21,481	0/0:34,0:22:45.48:0,45,746	0/0:26,0:18:23.95:0,24,394	0/0:22,0:22:66.21:0,66,1378	0/0:15,0:15:33.11:0,33,792	0/0:24,0:24:63.22:0,63,1546	0/0:39,0:39:99:0,111,2652	0/0:12,0:12:27.09:0,27,701	0/0:23,0:23:63.21:0,63,1466	0/0:24,0:24:60.20:0,60,1253	0/0:12,0:12:36.12:0,36,821	1/1:1,15:16:32.75:591,33,0	1/1:1,18:19:36.12:647,36,0	0/0:20,0:20:60.19:0,60,1362	0/0:22,0:22:54.18:0,54,1229	0/0:25,0:25:50.91:0,51,1545	0/0:24,0:24:66.23:0,66,1674	0/0:35,0:35:99:0,99,2273	0/0:26,0:26:72.25:0,72,1702	0/0:26,0:26:75.26:0,75,1880	0/0:12,0:12:36.12:0,36,871	0/0:15,0:15:42.14:0,42,941	0/0:28,0:28:75.24:0,75,1810	0/0:17,0:17:51.14:0,51,1091	0/0:26,0:26:78.27:0,78,1963	0/0:25,0:25:72.25:0,72,1728	0/0:5,0:5:6.02:0,6,156
chr10	28654467	.	G	GA	5553.85	PASS	AB=0.638;AC=43;AF=0.768;AN=56;BaseQRankSum=-4.429;DP=615;FS=2.354;HRun=13;HaplotypeScore=101.9784;InbreedingCoeff=0.2561;MQ=67.81;MQ0=1;MQRankSum=0.420;QD=10.13;ReadPosRankSum=-2.182;VQSLOD=3.8876;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,28:33:18.30:300,18,0	1/1:1,12:14:32.87:293,33,0	1/1:21,0:14:3.15:13,3,0	0/0:17,0:13:3.51:0,4,42	1/1:14,7:23:24.52:322,25,0	1/1:8,16:26:35.72:307,36,0	1/1:9,14:23:10.70:233,11,0	1/1:16,17:33:27.61:323,28,0	0/1:8,10:19:1.02:132,0,1	1/1:18,8:26:29.54:352,30,0	1/1:14,11:24:40.24:362,40,0	1/1:4,9:13:2.86:51,3,0	1/1:8,18:26:4.26:172,4,0	1/1:2,13:15:15.90:141,16,0	0/1:11,11:22:24.08:141,0,24	1/1:7,8:15:27.03:250,27,0	0/0:4,0:21:26.46:0,26,76	0/0:5,0:28:38.06:0,38,110	0/1:11,15:27:40.59:324,0,41	1/1:16,19:36:25.30:316,25,0	0/1:10,18:28:8.09:217,0,8	0/1:7,7:14:4.05:128,0,4	1/1:15,5:20:8.92:212,9,0	1/1:3,11:14:23.62:223,24,0	1/1:6,13:20:17.08:176,17,0	0/1:11,8:20:4.06:224,0,4	0/1:4,14:19:16.61:92,0,17	1/1:3,12:15:26.61:250,27,0
chr10	28657233	.	GGTTTT	G	1453.86	PASS	AB=0.679;AC=3;AF=0.054;AN=56;BaseQRankSum=-1.530;DP=571;FS=14.301;HRun=0;HaplotypeScore=162.0041;InbreedingCoeff=0.7322;MQ=70.62;MQ0=3;MQRankSum=1.684;QD=33.81;ReadPosRankSum=1.116;VQSLOD=2.6907;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,99,2383	0/0:11,0:11:18.05:0,18,446	0/0:44,0:32:27.05:0,27,602	0/0:47,0:25:16.33:0,16,315	0/0:16,0:16:39.05:0,39,1001	0/0:12,0:12:27.09:0,27,721	0/0:18,0:18:42.12:0,42,1002	0/0:26,0:26:33.10:0,33,842	0/0:17,0:17:39.13:0,39,1042	0/0:25,0:25:60.20:0,60,1579	0/0:19,0:19:30.01:0,30,625	0/0:21,0:21:39.06:0,39,952	0/0:11,0:11:27.02:0,27,626	0/0:20,0:20:42.14:0,42,1132	0/0:15,0:15:39.13:0,39,1027	0/0:23,0:23:51.17:0,51,1360	1/1:6,18:24:57.10:985,57,0	0/1:10,9:19:5:575,0,5	0/0:20,0:18:30.08:0,30,741	0/0:16,0:16:36.12:0,36,924	0/0:16,0:16:30.57:0,31,765	0/0:16,0:16:27.02:0,27,692	0/0:11,0:11:18.06:0,18,445	0/0:26,0:26:54.03:0,54,1303	0/0:23,0:23:57.20:0,57,1549	0/0:20,0:20:42.07:0,42,1042	0/0:13,0:13:27.07:0,27,698	0/0:7,0:7:21.07:0,21,574
chr10	28657330	.	TCA	T	1330.44	PASS	AB=0.979;AC=5;AF=0.089;AN=56;BaseQRankSum=-2.218;DP=647;FS=43.295;HRun=0;HaplotypeScore=138.0345;InbreedingCoeff=0.4489;MQ=52.60;MQ0=9;MQRankSum=3.192;QD=12.43;ReadPosRankSum=4.736;VQSLOD=1.1602;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:11.32:0,11,137	0/0:9,0:9:1.86:0,2,2	0/1:46,1:21:6.11:6,0,298	0/0:29,0:16:7.65:0,8,254	0/0:14,0:12:2.22:0,2,7	0/0:17,0:16:2.77:0,3,40	0/0:25,0:25:9.32:0,9,101	0/0:30,0:24:44.50:0,44,462	0/0:19,0:19:3:0,3,26	0/0:19,0:33:54.70:0,55,445	0/0:16,0:18:8.49:0,8,53	0/0:16,0:21:3.43:0,3,27	0/0:15,0:15:9.50:0,9,113	0/0:26,0:26:11.82:0,12,115	0/0:10,0:12:8.65:0,9,70	0/0:16,0:16:0.22:0,0,0	1/1:14,18:31:54.16:644,54,0	1/1:5,22:28:68.99:801,69,0	0/0:7,0:6:11.94:0,12,103	0/0:26,0:26:12.96:0,13,137	0/0:21,0:21:6.02:0,6,76	0/0:26,0:25:0.28:0,1,0	0/0:25,0:24:5.52:0,6,62	0/0:34,0:34:3.01:0,3,43	0/0:19,0:29:16:0,16,114	0/0:19,0:21:28.51:0,29,250	0/0:22,0:22:21.40:0,21,177	0/0:9,0:9:6.40:0,6,26
chr10	28657943	.	G	GC	14548.13	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=6.961;DP=509;FS=15.910;HRun=5;HaplotypeScore=78.9347;InbreedingCoeff=0.9803;MQ=79.34;MQ0=0;MQRankSum=-2.638;QD=33.60;ReadPosRankSum=0.449;VQSLOD=3.4416;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,16:21:50.51:624,51,0	1/1:0,6:6:18.06:237,18,0	0/0:14,0:14:24.14:0,24,334	0/0:10,0:10:14.27:0,14,181	1/1:1,8:8:15.05:197,15,0	1/1:1,18:19:42.14:553,42,0	1/1:2,20:22:60.20:790,60,0	1/1:4,17:21:51.14:636,51,0	1/1:1,23:24:66.21:867,66,0	1/1:0,14:14:42.14:550,42,0	1/1:1,8:9:15.05:196,15,0	1/1:1,20:21:60.19:786,60,0	1/1:3,19:22:51.15:643,51,0	1/1:1,17:18:54.18:706,54,0	1/1:1,24:25:75.24:981,75,0	1/1:1,16:17:45.15:592,45,0	0/0:21,0:21:60.15:0,60,645	0/0:31,0:31:93.23:0,93,999	1/1:4,12:16:33.11:433,33,0	1/1:0,12:12:30.10:395,30,0	1/1:4,47:51:99:1736,132,0	1/1:1,20:21:44.85:592,45,0	1/1:1,12:13:30.10:395,30,0	1/1:2,21:23:60.15:770,60,0	1/1:1,14:15:45.14:578,45,0	1/1:0,18:18:54.18:706,54,0	1/1:1,8:10:27.09:350,27,0	1/1:0,6:6:18.06:237,18,0
chr10	28658246	.	T	TGAGA	378.45	PASS	AB=0.974;AC=15;AF=0.395;AN=38;BaseQRankSum=1.287;DP=472;FS=26.822;HRun=0;HaplotypeScore=96.6018;InbreedingCoeff=0.3865;MQ=57.93;MQ0=9;MQRankSum=-0.919;QD=2.13;ReadPosRankSum=-1.017;VQSLOD=-0.2314;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:21:9.01:101,9,0	0/0:10,0:11:3:0,3,28	./.	./.	1/1:21,0:20:12.04:237,12,0	0/1:24,0:23:0.01:0,0,1	0/0:24,0:23:15.05:0,15,228	0/1:14,0:14:0:0,0,0	./.	0/1:15,0:15:0:0,0,0	./.	0/0:20,0:20:12.03:0,12,183	0/0:14,0:16:5.75:0,6,72	./.	0/0:16,0:16:5.96:0,6,89	0/0:14,0:14:5.99:0,6,68	0/1:14,0:18:10.59:11,0,119	1/1:6,7:13:5.30:76,5,0	./.	0/1:12,0:12:0:0,0,0	0/1:10,0:10:0:0,0,0	./.	./.	0/0:23,0:23:26.98:0,27,381	0/1:14,0:14:22.04:63,0,22	1/1:15,0:15:2.29:6,2,0	0/0:28,0:28:5.59:0,6,91	./.
chr10	28658805	.	C	CCG	1238.29	PASS	AB=0.857;AC=31;AF=0.554;AN=56;BaseQRankSum=0.240;DP=432;FS=16.864;HRun=0;HaplotypeScore=69.0010;InbreedingCoeff=-0.0991;MQ=61.48;MQ0=22;MQRankSum=0.555;QD=4.34;ReadPosRankSum=3.932;VQSLOD=0.6603;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:8,2:22:15.12:53,0,15	0/1:8,0:8:9.69:10,0,40	0/0:41,0:15:22.57:0,23,228	0/0:55,0:16:6.47:0,6,110	0/0:12,0:14:0.47:0,0,1	1/1:17,0:17:8.88:64,9,0	0/1:5,1:22:33.72:116,0,34	1/1:13,8:19:12.16:118,12,0	0/1:11,0:11:11.23:46,0,11	1/1:14,0:16:2.48:159,2,0	0/1:2,2:4:18.65:32,0,19	0/1:13,0:13:42.89:113,0,43	1/1:4,0:4:2.96:29,3,0	1/1:9,0:9:14.86:125,15,0	0/1:9,5:13:29.98:59,0,30	1/1:1,6:8:5.22:53,5,0	0/1:23,0:22:29.40:29,0,45	0/0:15,0:13:9.19:0,9,126	1/1:11,0:10:5.06:47,5,0	0/1:10,0:9:27.52:28,0,37	1/1:6,2:19:5.54:40,6,0	0/1:12,0:12:8.45:95,0,8	0/1:10,0:11:12.31:62,0,12	0/0:8,0:15:5.99:0,6,48	0/1:11,0:11:8:8,0,14	0/1:7,0:16:24.99:111,0,25	0/0:7,0:7:8.89:0,9,61	1/1:2,0:2:0.89:2,1,0
chr10	28659827	.	A	AT	11500.09	PASS	AB=0.577;AC=45;AF=0.804;AN=56;BaseQRankSum=-9.524;DP=604;FS=3.411;HRun=10;HaplotypeScore=58.9453;InbreedingCoeff=0.6888;MQ=72.26;MQ0=0;MQRankSum=-1.669;QD=21.90;ReadPosRankSum=1.218;VQSLOD=5.9224;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,24:28:57.14:608,57,0	1/1:0,7:8:23.89:238,24,0	0/0:14,0:14:20.06:0,20,176	0/0:8,0:9:10.60:0,11,88	1/1:5,22:27:46.97:657,47,0	1/1:5,19:24:54.14:576,54,0	1/1:6,18:25:50.96:526,51,0	1/1:13,33:46:43.95:860,44,0	1/1:4,22:26:57.14:606,57,0	1/1:7,16:23:23.62:439,24,0	1/1:5,17:22:29.44:499,29,0	1/1:2,9:11:24.02:244,24,0	1/1:1,22:23:60.15:639,60,0	1/1:4,13:17:5.43:263,5,0	1/1:4,24:28:57.14:608,57,0	1/1:0,14:14:33.08:352,33,0	0/0:29,0:29:74.85:0,75,607	0/0:25,0:27:64.94:0,65,519	1/1:6,15:21:17.30:373,17,0	0/1:6,10:16:13.20:283,0,13	1/1:4,18:23:10.86:522,11,0	1/1:3,11:14:6.33:265,6,0	0/1:5,18:23:0.70:401,0,1	1/1:2,26:28:31.92:750,32,0	1/1:2,11:13:30.08:320,30,0	1/1:4,18:22:57.14:606,57,0	1/1:6,26:32:66:681,66,0	0/1:2,7:10:0.75:182,0,1
chr10	28659983	.	AAAAC	A	5047.71	PASS	AB=0.990;AC=29;AF=0.518;AN=56;BaseQRankSum=9.086;DP=674;FS=4.591;HRun=0;HaplotypeScore=137.7634;InbreedingCoeff=-0.3284;MQ=57.80;MQ0=17;MQRankSum=0.044;QD=9.30;ReadPosRankSum=6.627;VQSLOD=3.5944;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:48,0:48:11.96:437,0,12	0/1:12,0:12:0.88:105,0,1	0/0:33,0:11:23.81:0,24,266	0/0:31,0:6:11.68:0,12,114	1/1:34,0:34:42.27:488,42,0	0/1:18,0:18:5.08:157,0,5	0/1:21,0:21:12.96:199,0,13	0/1:26,1:26:35.27:261,0,35	0/1:19,0:19:13.52:145,0,14	0/1:26,0:25:37.19:286,0,37	1/1:21,0:21:7.35:265,7,0	0/1:15,1:16:48.14:183,0,48	1/1:27,0:26:23.84:306,24,0	0/1:18,0:18:15.59:190,0,16	1/1:24,0:24:21.09:281,21,0	0/1:17,0:17:10.78:155,0,11	0/0:35,0:34:56.74:0,57,612	0/0:32,0:32:89.20:0,89,986	0/1:21,0:18:18.74:203,0,19	0/1:19,0:19:16.25:122,0,16	0/1:21,0:21:70.74:77,0,71	0/1:18,2:19:26.02:184,0,26	1/1:17,0:17:2.50:159,2,0	0/1:29,0:29:57.61:147,0,58	0/1:24,0:22:15.90:139,0,16	0/1:27,0:25:47.48:251,0,47	0/1:30,0:29:31.68:266,0,32	0/1:7,0:7:12.63:41,0,13
chr10	28659987	.	CAAAA	C	12241.55	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-7.628;DP=661;FS=1.698;HRun=15;HaplotypeScore=111.3432;InbreedingCoeff=0.8962;MQ=56.55;MQ0=18;MQRankSum=0.193;QD=23.27;ReadPosRankSum=2.115;VQSLOD=4.0788;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,40:48:84.36:1147,84,0	1/1:1,8:10:22.30:282,22,0	0/0:35,0:10:13.56:0,14,172	0/0:31,0:6:8.78:0,9,71	1/1:3,29:33:87.64:1072,88,0	1/1:2,16:18:33.04:448,33,0	1/1:4,15:19:35.79:460,36,0	1/1:6,17:24:32.70:614,33,0	1/1:3,16:19:27.04:368,27,0	1/1:5,21:25:63.14:837,63,0	1/1:2,17:21:48.66:573,49,0	1/1:6,10:16:0.91:375,1,0	1/1:2,25:26:45.15:611,45,0	1/1:3,13:17:26.69:349,27,0	1/1:1,24:25:42.11:567,42,0	1/1:2,15:17:33.07:450,33,0	0/0:6,0:33:51.16:0,51,623	0/0:17,0:32:84.08:0,84,1091	1/1:8,14:19:44.87:544,45,0	1/1:3,12:16:28.19:354,28,0	1/1:5,19:25:22.62:273,23,0	1/1:6,11:16:30.44:375,30,0	1/1:1,12:14:26.69:367,27,0	1/1:5,20:25:32.77:419,33,0	1/1:5,16:19:29.52:376,30,0	1/1:9,17:25:33.48:667,33,0	1/1:6,25:30:33.09:590,33,0	1/1:1,6:7:9:123,9,0
chr10	28660414	.	A	AC	22953.70	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-13.002;DP=622;FS=0.879;HRun=0;HaplotypeScore=57.5558;InbreedingCoeff=0.9952;MQ=85.76;MQ0=0;MQRankSum=-5.736;QD=43.23;ReadPosRankSum=2.689;VQSLOD=5.3427;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,49:49:99:2051,129,0	1/1:1,10:11:18.06:288,18,0	0/0:20,0:20:58.92:0,59,745	0/0:19,0:19:53.64:0,54,700	1/1:0,24:24:72.25:1150,72,0	1/1:0,23:23:69.24:1103,69,0	1/1:1,21:22:48.16:767,48,0	1/1:1,25:26:75.21:1127,75,0	1/1:0,20:20:57.19:911,57,0	1/1:2,22:24:66.19:1003,66,0	1/1:0,17:17:45.15:719,45,0	1/1:1,17:18:45.15:718,45,0	1/1:0,13:13:36.12:575,36,0	1/1:0,9:9:18.06:286,18,0	1/1:1,21:22:60.20:959,60,0	1/1:0,17:17:45.62:720,46,0	0/0:27,0:27:78.26:0,78,1090	0/0:25,0:25:72.20:0,72,984	1/1:0,23:23:66.17:981,66,0	1/1:0,32:32:90.24:1408,90,0	1/1:1,45:46:99:2061,129,0	1/1:0,12:12:27.09:431,27,0	1/1:0,18:18:51.17:815,51,0	1/1:0,25:24:72.25:1151,72,0	1/1:0,19:19:51.17:815,51,0	1/1:0,22:22:66.22:1046,66,0	1/1:0,23:23:69.24:1102,69,0	1/1:0,16:15:48.16:766,48,0
chr10	28662728	.	G	GT	655.44	PASS	AB=0.930;AC=11;AF=0.196;AN=56;BaseQRankSum=-4.224;DP=358;FS=27.583;HRun=11;HaplotypeScore=37.3895;InbreedingCoeff=0.2137;MQ=81.21;MQ0=0;MQRankSum=0.174;QD=4.93;ReadPosRankSum=0.658;VQSLOD=-0.0928;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,2:32:23.84:0,24,528	0/0:11,0:11:32.87:0,33,255	0/0:15,0:14:3.89:0,4,46	0/1:14,0:12:1.96:2,0,28	0/0:17,0:18:43.85:0,44,329	0/0:8,0:9:19.94:0,20,142	0/0:8,0:8:17.91:0,18,139	0/1:13,3:16:64.50:65,0,112	0/0:14,0:14:35.84:0,36,278	0/0:12,0:12:23.89:0,24,186	0/0:7,0:8:13.97:0,14,98	0/1:8,0:8:6.89:7,0,98	0/0:6,0:6:11.88:0,12,86	0/1:7,0:9:6.04:6,0,95	0/0:7,0:7:14.93:0,15,116	0/0:11,0:11:2.52:0,3,141	1/1:4,17:23:13.67:470,14,0	1/1:3,13:16:20.88:197,21,0	0/0:14,0:14:29.88:0,30,231	0/0:8,0:8:11.93:0,12,93	0/1:27,1:28:13.63:14,0,389	0/0:6,0:6:17.93:0,18,139	0/1:9,0:9:2.65:3,0,98	0/0:15,0:15:43.79:0,44,324	0/0:9,0:9:17.91:0,18,139	0/0:13,0:13:26.86:0,27,207	0/0:9,0:9:20.77:0,21,152	0/1:5,2:8:37.92:38,0,99
chr10	28664108	.	CTTGT	C	16218.78	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=9.544;DP=689;FS=1.108;HRun=0;HaplotypeScore=141.3777;InbreedingCoeff=0.9914;MQ=67.19;MQ0=4;MQRankSum=-0.965;QD=27.82;ReadPosRankSum=2.419;VQSLOD=4.9905;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,27:35:72.25:1167,72,0	1/1:2,5:7:15.05:243,15,0	0/0:25,0:20:24.08:0,24,564	0/0:29,0:27:36.12:0,36,711	1/1:6,25:30:56.99:922,57,0	1/1:7,17:24:30.10:486,30,0	1/1:5,19:24:45.15:729,45,0	1/1:16,16:32:48.11:675,48,0	1/1:7,21:27:54.18:876,54,0	1/1:15,25:40:72.25:1156,72,0	1/1:7,10:17:27.09:437,27,0	1/1:8,15:23:39.13:632,39,0	1/1:6,14:20:36.12:583,36,0	1/1:4,20:24:54.06:876,54,0	1/1:11,26:37:72.25:1168,72,0	1/1:14,18:32:54.18:876,54,0	0/0:30,0:30:66.22:0,66,1555	0/0:22,0:22:45.14:0,45,943	1/1:11,12:22:36.09:542,36,0	1/1:6,12:18:36.12:583,36,0	1/1:10,7:17:18.06:292,18,0	1/1:6,11:17:33.07:506,33,0	1/1:10,13:23:32.77:534,33,0	1/1:6,16:21:33.11:535,33,0	1/1:6,12:18:24.08:389,24,0	1/1:8,14:23:44.16:699,44,0	1/1:10,17:26:39.13:632,39,0	1/1:0,21:21:42.14:681,42,0
chr10	28665403	.	A	AACACACAC	5519.30	PASS	AB=0.923;AC=48;AF=0.923;AN=52;BaseQRankSum=-0.747;DP=603;FS=9.055;HRun=0;HaplotypeScore=161.4884;InbreedingCoeff=0.1656;MQ=57.45;MQ0=13;MQRankSum=-0.380;QD=11.17;ReadPosRankSum=0.825;VQSLOD=3.4750;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:29:8.94:106,9,0	1/1:11,0:11:6.02:181,6,0	./.	./.	1/1:13,0:13:3.48:66,3,0	1/1:13,0:18:6.48:158,6,0	0/1:27,0:31:31.01:254,0,31	1/1:27,0:26:12.25:108,12,0	1/1:8,0:10:6.02:156,6,0	1/1:16,0:16:21.94:428,22,0	1/1:13,0:13:3.48:45,3,0	1/1:25,0:24:16.41:400,16,0	1/1:14,0:18:13.37:316,13,0	1/1:19,0:21:12.04:295,12,0	1/1:22,0:25:12.04:325,12,0	1/1:8,0:11:6.02:168,6,0	1/1:23,0:30:21.13:451,21,0	1/1:22,0:25:23.76:601,24,0	1/1:20,1:20:9.50:278,10,0	1/1:14,0:14:3:25,3,0	0/0:42,9:55:2.43:0,2,29	1/1:18,0:20:9.03:201,9,0	0/1:16,0:16:0:1,0,0	1/1:18,0:25:7.27:172,7,0	1/1:19,0:17:3.01:74,3,0	1/1:21,0:20:23.61:335,24,0	1/1:18,0:21:12.91:271,13,0	1/1:6,0:7:3.01:104,3,0
chr10	28670872	.	A	AGGG	5620.83	PASS	AB=0.902;AC=48;AF=0.857;AN=56;BaseQRankSum=4.033;DP=452;FS=3.018;HRun=10;HaplotypeScore=104.7064;InbreedingCoeff=0.5887;MQ=83.25;MQ0=1;MQRankSum=-4.359;QD=14.23;ReadPosRankSum=-2.026;VQSLOD=2.5548;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:23,2:25:39.45:529,39,0	1/1:13,0:14:17.89:206,18,0	0/0:14,0:13:13.68:0,14,125	0/1:33,0:29:7.21:7,0,98	1/1:24,0:25:31.97:365,32,0	1/1:16,0:16:30.10:460,30,0	1/1:17,1:18:34.66:489,35,0	1/1:13,1:14:15.04:183,15,0	1/1:19,0:19:25.96:281,26,0	1/1:9,0:9:4.13:21,4,0	1/1:10,0:10:20.90:113,21,0	1/1:14,4:18:27.09:446,27,0	1/1:5,2:7:12.04:205,12,0	1/1:8,2:10:12.04:196,12,0	1/1:10,0:10:6.02:78,6,0	1/1:14,2:16:21.07:327,21,0	0/0:28,0:31:81.05:0,81,947	0/0:12,0:12:1.98:0,2,266	1/1:14,1:15:21.71:252,22,0	1/1:14,1:15:24.54:301,25,0	1/1:19,2:21:26.52:352,27,0	1/1:11,0:11:10.58:123,11,0	1/1:13,0:13:2.88:34,3,0	1/1:13,1:14:24.46:380,24,0	1/1:13,0:13:11.82:31,12,0	1/1:16,0:18:21.07:103,21,0	1/1:22,0:22:31.65:113,32,0	0/1:5,0:6:0.10:23,0,0
chr10	28670881	.	G	GGGA	9947.17	PASS	AB=1.000;AC=49;AF=0.875;AN=56;BaseQRankSum=-2.642;DP=482;FS=2.549;HRun=0;HaplotypeScore=86.5795;InbreedingCoeff=0.8142;MQ=81.74;MQ0=1;MQRankSum=-4.004;QD=23.80;ReadPosRankSum=-0.170;VQSLOD=4.7389;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,19:27:39.52:714,40,0	1/1:4,11:15:21.12:349,21,0	0/0:15,0:15:25.76:0,26,254	0/1:27,0:22:0.93:1,0,210	1/1:3,15:20:42.16:598,42,0	1/1:0,17:18:30.10:639,30,0	1/1:1,21:24:36.11:721,36,0	1/1:3,13:19:42:547,42,0	1/1:0,12:19:29.90:494,30,0	1/1:0,0:14:41.96:360,42,0	1/1:0,0:9:27.05:297,27,0	1/1:7,13:20:27.09:540,27,0	1/1:2,5:7:12.04:235,12,0	1/1:2,8:11:12.04:217,12,0	1/1:2,9:12:8.96:148,9,0	1/1:2,10:14:21.07:440,21,0	0/0:38,0:38:99:0,108,1426	0/0:11,0:11:32.43:0,32,422	1/1:2,11:17:45.53:589,46,0	1/1:3,12:16:35.92:529,36,0	1/1:4,15:23:27.55:501,28,0	1/1:3,8:11:9.91:196,10,0	1/1:5,8:15:2.30:51,2,0	1/1:1,12:16:24:511,24,0	1/1:1,0:14:24.01:214,24,0	1/1:4,0:20:53.69:483,54,0	1/1:0,0:21:51.18:433,51,0	1/1:0,0:9:17.60:142,18,0
chr10	28672338	.	C	CCTTCCTTCCTTC	5234.96	PASS	AB=1.000;AC=20;AF=0.385;AN=52;BaseQRankSum=-5.883;DP=784;FS=8.748;HRun=0;HaplotypeScore=286.1499;InbreedingCoeff=0.5706;MQ=64.70;MQ0=3;MQRankSum=-5.579;QD=13.92;ReadPosRankSum=-2.372;VQSLOD=2.1026;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:36,0:36:14.90:15,0,22	0/0:11,0:11:7.77:0,8,18	./.	./.	0/0:34,0:34:69.14:0,69,2046	0/0:28,0:28:9.48:0,9,29	0/1:36,0:36:5.90:6,0,16	1/1:42,0:42:8.94:65,9,0	0/0:18,0:18:8.10:0,8,26	1/1:26,0:26:30.10:743,30,0	1/1:26,0:26:24.43:491,24,0	0/0:19,0:19:13.08:0,13,31	0/0:28,0:28:14.13:0,14,39	0/0:32,0:32:22.24:0,22,51	0/0:43,0:43:21.77:0,22,50	0/0:26,0:26:3.74:0,4,32	0/0:31,0:31:51.01:0,51,1465	0/0:28,0:28:51.14:0,51,1511	1/1:24,0:23:2.20:147,2,0	0/1:36,0:36:97.01:197,0,97	0/0:32,0:32:21.67:0,22,127	0/0:31,0:31:4.86:0,5,30	0/0:25,0:25:17.63:0,18,112	0/1:41,0:41:18.62:19,0,131	1/1:29,0:29:21.07:526,21,0	1/1:34,0:34:51.13:1768,51,0	1/1:25,6:31:18.02:823,18,0	1/1:14,0:13:15.04:436,15,0
chr10	28675383	.	C	CACATACAT	1541.10	PASS	AB=1.000;AC=17;AF=0.315;AN=54;BaseQRankSum=0.845;DP=218;FS=7.745;HRun=0;HaplotypeScore=83.0504;InbreedingCoeff=0.5596;MQ=44.38;MQ0=4;MQRankSum=-4.409;QD=23.71;ReadPosRankSum=0.610;VQSLOD=2.3170;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:13.52:0,14,296	0/0:4,0:4:3.01:0,3,60	0/0:17,0:12:12.04:0,12,193	0/0:8,0:6:3.01:0,3,38	0/0:10,0:9:12.66:0,13,235	0/0:5,0:5:8.96:0,9,163	0/0:8,0:8:8.45:0,8,181	0/1:9,0:9:13.55:14,0,127	0/0:12,0:12:22.40:0,22,378	1/1:4,0:4:6.02:94,6,0	1/1:3,5:10:2.35:121,2,0	0/0:8,0:8:17.99:0,18,395	0/0:7,0:7:6.02:0,6,147	0/0:4,0:4:6.42:0,6,152	0/0:7,0:7:8.93:0,9,220	0/0:4,0:4:9.03:0,9,226	1/1:11,0:11:9.03:259,9,0	1/1:4,0:4:11.07:324,11,0	0/0:12,0:11:1.25:0,1,3	./.	0/0:9,0:8:17.95:0,18,275	0/0:3,0:3:3.01:0,3,75	0/0:5,0:5:2.94:0,3,75	0/0:10,0:9:9.86:0,10,212	1/1:9,0:9:1.77:44,2,0	1/1:5,5:9:12.04:408,12,0	1/1:4,1:4:12.04:320,12,0	1/1:1,2:3:3.01:123,3,0
chr10	28678724	.	TAG	T	3799.58	PASS	AB=0.960;AC=38;AF=0.679;AN=56;BaseQRankSum=1.676;DP=567;FS=55.715;HRun=0;HaplotypeScore=122.8617;InbreedingCoeff=0.0635;MQ=79.11;MQ0=11;MQRankSum=-3.013;QD=7.88;ReadPosRankSum=9.686;VQSLOD=0.7272;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:24:12.03:14,0,12	1/1:12,0:12:10.42:148,10,0	0/0:32,0:24:45.42:0,45,892	0/0:27,0:16:28.04:0,28,495	0/1:23,0:23:6.57:7,0,125	1/1:16,0:16:43.18:234,43,0	1/1:15,0:15:38.31:215,38,0	1/1:27,0:27:49.38:398,49,0	1/1:18,0:17:44.94:242,45,0	1/1:16,0:16:7.24:160,7,0	1/1:8,0:8:23.23:130,23,0	0/1:17,0:17:17.02:153,0,17	0/1:5,14:19:26.46:26,0,68	0/1:21,0:21:17.21:212,0,17	0/1:25,0:25:30.58:213,0,31	1/1:22,0:22:48.78:298,49,0	0/1:35,0:35:11.81:12,0,94	1/1:19,0:19:1.03:29,1,0	0/1:17,1:18:57.52:172,0,58	0/1:19,0:18:34.99:196,0,35	1/1:24,0:24:9.94:208,10,0	0/0:25,0:25:18.40:0,18,160	0/1:15,0:15:1.13:1,0,12	1/1:22,0:22:28.78:197,29,0	0/1:19,0:18:1.20:187,0,1	1/1:19,0:19:2.75:200,3,0	0/1:17,0:17:14.09:14,0,112	1/1:12,0:8:23.32:134,23,0
chr10	28678725	.	AGT	A	11729.83	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-4.346;DP=559;FS=2.662;HRun=0;HaplotypeScore=95.0444;InbreedingCoeff=0.7186;MQ=77.58;MQ0=13;MQRankSum=-3.400;QD=23.37;ReadPosRankSum=1.789;VQSLOD=5.6715;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,22:23:3.01:38,3,0	1/1:12,0:12:33.11:448,33,0	0/0:31,0:22:33.21:0,33,569	0/0:26,0:15:25.62:0,26,359	1/1:0,21:21:35.67:258,36,0	1/1:17,0:16:45.15:605,45,0	1/1:16,0:15:42.10:560,42,0	1/1:1,26:27:78.26:1045,78,0	1/1:18,0:17:51.14:656,51,0	1/1:2,14:16:39.07:501,39,0	1/1:8,0:8:24.08:330,24,0	1/1:17,0:17:44.93:559,45,0	1/1:18,0:18:7.42:62,7,0	1/1:21,0:21:46.47:655,46,0	1/1:24,1:25:63.07:788,63,0	1/1:22,0:22:66.03:825,66,0	1/1:35,0:34:6.02:67,6,0	1/1:18,1:19:11.82:108,12,0	1/1:5,12:17:42:553,42,0	1/1:18,1:18:7.63:577,8,0	1/1:24,0:24:35.45:660,35,0	1/1:0,24:25:20.77:139,21,0	1/1:1,14:15:5.93:40,6,0	1/1:22,0:22:32.85:597,33,0	1/1:19,0:18:13.53:602,14,0	1/1:2,17:19:52.38:661,52,0	1/1:3,12:15:6.02:70,6,0	1/1:12,0:8:24.08:325,24,0
chr10	28678729	.	TGTTCTCTC	T	11189.97	PASS	AB=1.000;AC=40;AF=0.714;AN=56;BaseQRankSum=-6.964;DP=569;FS=7.021;HRun=0;HaplotypeScore=141.3239;InbreedingCoeff=-0.0994;MQ=71.09;MQ0=16;MQRankSum=-1.133;QD=21.56;ReadPosRankSum=2.161;VQSLOD=3.9367;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:25:3.01:38,3,0	1/1:11,0:11:33.11:448,33,0	0/0:27,0:18:32.39:0,32,564	0/0:23,0:12:25.62:0,26,359	1/1:23,0:23:35.67:258,36,0	0/1:21,0:20:28.90:557,0,29	1/1:18,0:17:42.09:560,42,0	1/1:28,0:28:60.30:1024,60,0	0/1:22,0:22:21.99:602,0,22	0/1:15,0:15:3.32:412,0,3	0/1:11,0:11:51.49:303,0,51	1/1:15,0:15:5.25:489,5,0	0/1:17,0:17:41.28:41,0,127	1/1:19,0:19:46.10:630,46,0	1/1:22,0:22:63.07:788,63,0	0/1:23,0:23:22.84:712,0,23	1/1:2,29:30:5.96:145,6,0	1/1:2,17:20:12.04:286,12,0	0/1:14,0:14:21.21:496,0,21	1/1:18,0:17:6.97:576,7,0	0/1:25,0:25:13.91:596,0,14	0/1:28,0:28:54.86:115,0,55	1/1:19,0:18:5.66:40,6,0	0/1:25,0:24:40.28:504,0,40	1/1:20,0:19:8.43:597,8,0	0/1:21,0:21:10.60:604,0,11	1/1:13,0:13:6:70,6,0	0/1:15,0:10:12.31:298,0,12
chr10	28678731	.	T	TC	315.03	PASS	AB=0.978;AC=19;AF=0.339;AN=56;BaseQRankSum=2.286;DP=657;FS=7.613;HRun=0;HaplotypeScore=167.4302;InbreedingCoeff=0.0509;MQ=66.13;MQ0=18;MQRankSum=-2.808;QD=0.99;ReadPosRankSum=-4.920;VQSLOD=0.3596;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:31,0:29:0.93:41,1,0	0/0:13,0:13:2.84:0,3,11	0/0:25,0:17:28.97:0,29,466	0/0:23,0:12:20.34:0,20,312	0/0:25,0:25:1.82:0,2,6	0/1:26,2:26:10.74:61,0,11	0/0:21,0:20:1.25:0,1,6	0/0:37,0:37:19.98:0,20,117	0/1:23,4:26:19.26:85,0,19	0/1:18,0:18:36.15:36,0,54	1/1:16,0:16:0.76:20,1,0	0/1:20,0:20:14.67:27,0,15	0/1:21,0:20:3.33:44,0,3	0/0:24,0:23:5.32:0,5,45	0/0:26,0:26:1.41:0,1,7	0/1:25,0:25:2.76:3,0,18	0/0:31,0:30:7.05:0,7,49	0/0:20,0:20:12.82:0,13,87	1/1:17,0:17:2.92:51,3,0	0/0:20,0:19:5:0,5,31	0/0:26,0:26:0.05:0,0,21	1/1:32,0:32:2.62:24,3,0	0/1:21,0:20:0.04:0,0,0	0/0:26,0:25:9.09:0,9,65	0/0:21,0:20:4.68:0,5,24	0/1:27,0:25:7.96:8,0,105	0/1:15,0:15:16.80:17,0,39	1/1:20,0:14:1.26:36,1,0
chr10	28678777	.	C	CTCTCTCTCTCTG	6983.41	PASS	AB=1.000;AC=48;AF=0.857;AN=56;BaseQRankSum=-0.618;DP=536;FS=6.392;HRun=0;HaplotypeScore=194.3065;InbreedingCoeff=0.5925;MQ=55.46;MQ0=27;MQRankSum=-2.149;QD=15.52;ReadPosRankSum=2.943;VQSLOD=3.2658;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:21:35.42:302,35,0	1/1:9,0:9:17.96:144,18,0	0/0:36,0:16:32.04:0,32,346	0/0:22,0:13:25.28:0,25,302	1/1:14,0:14:26.49:192,26,0	1/1:17,0:15:21.91:251,22,0	1/1:21,0:21:47.55:380,48,0	1/1:33,0:33:78.42:590,78,0	1/1:26,0:25:54.63:492,55,0	1/1:21,0:20:42.65:498,43,0	1/1:9,0:9:11.52:116,12,0	1/1:13,0:13:18.47:205,18,0	1/1:17,0:15:40.39:484,40,0	1/1:18,0:17:30.08:226,30,0	1/1:19,0:19:32.90:259,33,0	1/1:18,0:18:25.83:188,26,0	0/1:28,0:26:15.17:254,0,15	0/1:21,0:21:99:216,0,110	1/1:5,0:5:14.52:152,15,0	1/1:18,0:16:26.93:215,27,0	1/1:24,0:23:39.77:308,40,0	1/1:19,0:19:23.49:211,23,0	1/1:16,0:16:12.31:97,12,0	0/0:6,17:27:0.02:0,0,12	1/1:15,0:14:33.43:276,33,0	1/1:15,0:12:30.36:352,30,0	1/1:7,0:6:14.99:243,15,0	1/1:23,0:18:42.77:333,43,0
chr10	28682955	.	GTC	G	2105.13	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.388;DP=618;FS=6.856;HRun=0;HaplotypeScore=73.5925;InbreedingCoeff=0.8960;MQ=89.69;MQ0=0;MQRankSum=-1.790;QD=34.51;ReadPosRankSum=1.361;VQSLOD=5.7456;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:93.30:0,93,1590	0/0:4,0:4:12.04:0,12,213	0/0:26,0:26:43.38:0,43,928	0/0:19,1:20:2.41:0,2,774	0/0:19,0:19:57.19:0,57,986	0/0:25,0:25:75.23:0,75,1300	0/0:22,0:22:63.22:0,63,1113	0/0:36,0:36:93.32:0,93,1645	0/0:19,0:19:57.20:0,57,1000	0/0:17,0:17:48.16:0,48,834	0/0:29,0:29:81.28:0,81,1430	0/0:17,0:17:42.14:0,42,740	0/0:26,0:26:72.25:0,72,1253	0/0:20,0:20:60.21:0,60,1061	0/0:20,0:20:54.18:0,54,954	0/0:17,0:17:51.17:0,51,891	1/1:0,36:36:93.31:1278,93,0	1/1:0,25:25:69.23:948,69,0	0/0:24,0:24:62.83:0,63,1087	0/0:19,0:19:51.17:0,51,905	0/0:15,0:15:45.15:0,45,788	0/0:23,0:23:63.22:0,63,1107	0/0:18,0:18:51.17:0,51,905	0/0:18,0:18:54.19:0,54,958	0/0:25,0:25:66.21:0,66,1121	0/0:29,0:29:84.28:0,84,1465	0/0:20,0:20:51.17:0,51,899	0/0:15,0:15:45.15:0,45,798
chr10	28683914	.	CT	C	11742.64	PASS	AB=0.981;AC=50;AF=0.893;AN=56;BaseQRankSum=2.857;DP=723;FS=0.000;HRun=12;HaplotypeScore=149.9905;InbreedingCoeff=0.6520;MQ=72.38;MQ0=1;MQRankSum=-0.924;QD=17.71;ReadPosRankSum=0.756;VQSLOD=3.9417;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,49:60:99:1002,116,0	1/1:1,8:9:17.93:139,18,0	0/1:24,1:23:45.32:45,0,197	0/1:10,0:9:8.36:8,0,62	1/1:2,27:29:57.77:540,58,0	1/1:2,14:16:35.86:278,36,0	1/1:2,21:23:59.74:460,60,0	1/1:10,30:40:86.52:658,87,0	1/1:2,19:21:56.78:441,57,0	1/1:6,28:34:80.47:610,80,0	1/1:2,20:22:50.78:394,51,0	1/1:2,23:25:62.74:487,63,0	1/1:3,21:24:53.77:417,54,0	1/1:4,17:21:32.83:251,33,0	1/1:0,23:23:59.77:464,60,0	1/1:0,26:26:62.70:487,63,0	0/0:25,0:25:58.38:0,58,332	0/0:35,0:35:86.39:0,86,483	1/1:9,16:25:50.75:388,51,0	1/1:1,20:21:56.78:441,57,0	1/1:7,29:36:86.62:669,87,0	1/1:1,30:31:86.65:671,87,0	1/1:2,18:20:53.79:418,54,0	1/1:3,38:41:99:878,114,0	1/1:4,24:28:74.71:580,75,0	1/1:3,30:33:89.61:691,90,0	1/1:5,9:14:23.90:186,24,0	1/1:0,6:6:17.93:139,18,0
chr10	28684344	.	G	GGCAGATGAGGC	4917.14	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-1.442;DP=645;FS=0.000;HRun=0;HaplotypeScore=200.7094;InbreedingCoeff=0.9977;MQ=89.96;MQ0=0;MQRankSum=-8.736;QD=126.08;ReadPosRankSum=-0.683;VQSLOD=4.9315;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,108,3741	0/0:7,0:7:21.06:0,21,642	0/0:23,0:23:57.17:0,57,1734	0/0:29,0:28:75.15:0,75,2157	0/0:23,0:23:66.23:0,66,2321	0/0:18,0:18:51.18:0,51,1818	0/0:29,0:29:87.30:0,87,2893	0/0:33,0:33:93.31:0,93,3115	0/0:17,0:17:48.15:0,48,1598	0/0:16,0:16:42.14:0,42,1496	0/0:23,0:23:69.21:0,69,2092	0/0:24,0:24:66.23:0,66,2205	0/0:20,0:20:57.20:0,57,1943	0/0:20,0:20:57.20:0,57,2034	0/0:19,0:19:54.19:0,54,1855	0/0:24,0:24:72.24:0,72,2445	1/1:8,12:22:57.19:2666,57,0	1/1:7,9:17:42.14:2251,42,0	0/0:26,0:26:66.21:0,66,2086	0/0:22,0:22:66.21:0,66,2151	0/0:30,0:30:87.28:0,87,2815	0/0:13,0:13:33.10:0,33,1052	0/0:23,0:23:63.05:0,63,2090	0/0:23,0:23:69.22:0,69,2224	0/0:28,0:28:78.26:0,78,2653	0/0:21,0:21:54.19:0,54,1895	0/0:36,0:36:99:0,105,3573	0/0:16,0:16:48.16:0,48,1649
chr10	28684397	.	A	ATG	1753.97	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.441;DP=672;FS=7.131;HRun=0;HaplotypeScore=93.8651;InbreedingCoeff=0.9774;MQ=69.65;MQ0=0;MQRankSum=-2.856;QD=32.48;ReadPosRankSum=1.408;VQSLOD=5.9908;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,99,1223	0/0:7,0:7:15.05:0,15,188	0/0:33,0:31:57.17:0,57,701	0/0:40,0:37:71.50:0,71,841	0/0:20,0:21:44.88:0,45,536	0/0:24,0:24:60.17:0,60,736	0/0:29,0:30:81.03:0,81,958	0/0:30,0:30:66.20:0,66,815	0/0:31,0:31:93.21:0,93,1142	0/0:19,0:20:53.99:0,54,630	0/0:23,0:23:13.71:0,14,627	0/0:20,0:20:51.15:0,51,624	0/0:22,0:22:48.15:0,48,599	0/0:23,0:23:60.16:0,60,723	0/0:17,0:17:45.10:0,45,533	0/0:28,0:28:75.23:0,75,928	1/1:7,26:33:75.26:1205,75,0	1/1:7,14:21:20.65:669,21,0	0/0:24,0:24:60.19:0,60,738	0/0:14,0:14:30.08:0,30,362	0/0:31,0:32:84.10:0,84,1026	0/0:14,0:14:36.10:0,36,436	0/0:17,0:17:45.12:0,45,537	0/0:23,0:23:66.19:0,66,812	0/0:15,0:15:33.08:0,33,398	0/0:18,0:18:24.13:0,24,401	0/0:29,0:28:60.17:0,60,735	0/0:21,0:21:54.17:0,54,675
chr10	28686379	.	TTA	T	839.19	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.279;DP=680;FS=1.613;HRun=0;HaplotypeScore=84.5258;InbreedingCoeff=0.9987;MQ=77.16;MQ0=2;MQRankSum=-1.389;QD=28.94;ReadPosRankSum=1.704;VQSLOD=5.2113;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,126,2147	0/0:10,0:10:30.09:0,30,518	0/0:25,0:20:43.63:0,44,604	0/0:18,0:15:29.87:0,30,373	0/0:35,0:35:99:0,105,1687	0/0:23,0:23:69.24:0,69,1245	0/0:25,0:25:75.09:0,75,1246	0/0:34,0:34:99:0,102,1429	0/0:22,0:22:65.88:0,66,973	0/0:38,0:38:99:0,114,1797	0/0:13,0:13:36.12:0,36,654	0/0:23,0:23:69.24:0,69,1227	0/0:20,0:20:60.18:0,60,1013	0/0:17,0:17:51.16:0,51,901	0/0:29,0:29:83.59:0,84,1353	0/0:24,0:24:72.20:0,72,1182	1/1:0,12:12:27.09:376,27,0	1/1:0,17:16:42.14:584,42,0	0/0:23,0:23:68.88:0,69,1021	0/0:30,0:30:86.81:0,87,1346	0/0:28,0:28:83.82:0,84,1262	0/0:26,0:26:56.76:0,57,1177	0/0:24,0:24:72.15:0,72,1146	0/0:18,0:18:54.13:0,54,849	0/0:20,0:20:60.02:0,60,877	0/0:31,0:31:93.18:0,93,1528	0/0:42,0:42:99:0,126,1854	0/0:11,0:11:32.98:0,33,543
chr10	28687449	.	CAGCT	C	2060.72	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.950;DP=752;FS=4.839;HRun=0;HaplotypeScore=117.7956;InbreedingCoeff=0.9979;MQ=88.11;MQ0=0;MQRankSum=-4.378;QD=38.88;ReadPosRankSum=1.821;VQSLOD=4.0719;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,123,3078	0/0:11,0:11:21.07:0,21,550	0/0:29,0:29:77.29:0,77,1791	0/0:25,0:25:60.20:0,60,1464	0/0:26,0:26:72.25:0,72,1850	0/0:24,0:24:69.24:0,69,1806	0/0:33,0:33:96.33:0,96,2470	0/0:38,0:38:90.30:0,90,2273	0/0:19,0:19:57.18:0,57,1424	0/0:28,0:28:66.23:0,66,1717	0/0:27,0:27:75.26:0,75,1948	0/0:27,0:27:75.24:0,75,1852	0/0:28,0:28:78.27:0,78,1958	0/0:21,0:21:57.20:0,57,1405	0/0:31,0:31:84.29:0,84,2200	0/0:22,0:22:63.22:0,63,1651	1/1:2,28:30:63.22:1146,63,0	1/1:1,22:22:57.20:1037,57,0	0/0:26,0:26:75.25:0,75,1904	0/0:27,0:27:81.28:0,81,2112	0/0:42,0:42:99:0,123,3222	0/0:22,0:22:57.20:0,57,1439	0/0:24,0:24:66.23:0,66,1729	0/0:29,0:29:84.29:0,84,2200	0/0:21,0:21:60.21:0,60,1572	0/0:29,0:29:72.25:0,72,1806	0/0:33,0:33:93.31:0,93,2372	0/0:13,0:13:39.13:0,39,1011
chr10	28688059	.	A	AT	1327.39	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-3.243;DP=392;FS=7.619;HRun=8;HaplotypeScore=63.2525;InbreedingCoeff=0.8634;MQ=65.45;MQ0=0;MQRankSum=-1.724;QD=25.05;ReadPosRankSum=1.828;VQSLOD=4.5036;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:66.03:0,66,604	0/0:9,0:9:24:0,24,216	0/0:7,0:6:11.97:0,12,101	0/0:3,0:2:2.92:0,3,17	0/0:11,0:11:30:0,30,269	0/0:19,0:19:48.01:0,48,439	0/0:10,0:10:20.96:0,21,178	0/0:35,0:35:93.03:0,93,846	0/0:10,0:10:21.01:0,21,192	0/0:17,0:17:51.01:0,51,460	0/0:12,0:12:30:0,30,267	0/0:5,0:5:12:0,12,110	0/0:16,0:16:30:0,30,275	0/0:12,0:12:30:0,30,271	0/0:10,0:10:27:0,27,242	0/0:12,0:12:30.01:0,30,271	1/1:1,25:26:63.19:727,63,0	1/1:2,25:25:63.18:722,63,0	0/0:18,0:18:51.03:0,51,466	0/0:11,0:11:26.96:0,27,235	0/0:7,0:7:15:0,15,137	0/0:7,0:7:14.99:0,15,133	0/0:12,0:12:27:0,27,242	0/0:9,0:9:14.95:0,15,129	0/0:18,0:18:51.03:0,51,467	0/0:14,0:14:42.02:0,42,384	0/0:19,0:19:45.01:0,45,408	0/0:11,0:11:29.86:0,30,241
chr10	28690393	.	G	GGT	4355.23	PASS	AB=0.843;AC=31;AF=0.596;AN=52;BaseQRankSum=-8.083;DP=605;FS=8.353;HRun=0;HaplotypeScore=87.4869;InbreedingCoeff=-0.3318;MQ=63.18;MQ0=12;MQRankSum=1.275;QD=8.64;ReadPosRankSum=0.485;VQSLOD=3.3257;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:42,2:42:6.96:330,0,7	0/1:11,1:12:0.91:101,0,1	./.	./.	0/1:10,1:14:8.02:138,0,8	0/1:17,2:20:9.07:212,0,9	1/1:10,11:22:27.09:404,27,0	0/1:30,0:28:14.76:15,0,72	0/1:10,7:18:88.86:152,0,89	0/1:13,0:15:35.06:78,0,35	1/1:7,8:16:15.05:225,15,0	1/1:10,8:18:18.06:270,18,0	1/1:8,5:13:9.02:116,9,0	0/1:9,9:19:71.88:243,0,72	1/1:15,9:24:15.05:225,15,0	0/1:13,1:15:15.88:135,0,16	0/0:13,0:29:45.79:0,46,261	0/0:13,0:21:19.54:0,20,93	1/1:16,4:21:0.90:122,1,0	0/1:15,3:18:16.06:81,0,16	0/1:29,16:45:77.39:159,0,77	0/1:8,3:12:5.08:81,0,5	0/1:12,5:18:48.16:72,0,48	0/1:22,12:35:25.57:492,0,26	0/1:21,5:28:22.65:336,0,23	0/1:14,5:19:29.39:182,0,29	0/1:15,0:14:26.38:54,0,26	1/1:4,5:8:8.92:135,9,0
chr10	28692031	.	GA	G	1981.94	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.369;DP=661;FS=0.516;HRun=2;HaplotypeScore=59.6344;InbreedingCoeff=0.9998;MQ=77.31;MQ0=0;MQRankSum=-0.760;QD=33.59;ReadPosRankSum=2.550;VQSLOD=3.7125;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,135,2022	0/0:12,0:12:36.12:0,36,536	0/0:19,0:19:54.12:0,54,736	0/0:19,0:17:46.62:0,47,683	0/0:19,0:19:57.18:0,57,832	0/0:19,0:19:57.19:0,57,854	0/0:26,0:26:78.26:0,78,1149	0/0:31,0:31:90.29:0,90,1312	0/0:28,0:28:84.27:0,84,1239	0/0:25,0:25:75.25:0,75,1108	0/0:20,0:20:60.20:0,60,899	0/0:25,0:25:75.25:0,75,1123	0/0:26,0:26:78.26:0,78,1169	0/0:19,0:19:57.19:0,57,854	0/0:19,0:19:57.19:0,57,854	0/0:32,0:32:96.31:0,96,1418	1/1:0,37:37:99:1286,99,0	1/1:0,22:22:63.20:818,63,0	0/0:17,0:17:51.12:0,51,721	0/0:24,0:24:66.22:0,66,989	0/0:32,0:32:93.32:0,93,1392	0/0:18,0:18:54.18:0,54,809	0/0:26,0:26:78.26:0,78,1168	0/0:15,0:15:45.10:0,45,628	0/0:19,0:19:57.19:0,57,854	0/0:27,0:27:81.27:0,81,1213	0/0:28,0:28:84.28:0,84,1255	0/0:11,0:11:33.11:0,33,495
chr10	28692621	.	G	GACA	22589.25	PASS	AB=0.587;AC=47;AF=0.839;AN=56;BaseQRankSum=-12.415;DP=699;FS=4.232;HRun=0;HaplotypeScore=85.7370;InbreedingCoeff=0.8209;MQ=70.04;MQ0=0;MQRankSum=-5.325;QD=38.81;ReadPosRankSum=1.665;VQSLOD=5.4924;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,22:35:51.17:1026,51,0	1/1:4,8:12:24.08:482,24,0	0/0:22,0:21:4.02:0,4,408	0/0:27,0:26:26.93:0,27,432	1/1:8,26:35:72.20:1397,72,0	1/1:2,16:19:48.16:965,48,0	0/1:8,19:27:30.45:911,0,30	1/1:16,16:32:54.17:984,54,0	1/1:5,21:27:54.18:1054,54,0	1/1:8,14:24:51.17:990,51,0	1/1:1,15:16:39.13:783,39,0	1/1:17,13:31:42.14:829,42,0	1/1:8,12:21:39.13:781,39,0	1/1:8,14:23:42.14:845,42,0	1/1:4,22:27:63.22:1268,63,0	1/1:6,14:20:39.13:785,39,0	0/0:39,0:39:83.81:0,84,1095	0/0:29,0:29:66.22:0,66,927	1/1:12,11:25:45.07:754,45,0	1/1:7,17:25:14.82:1003,15,0	1/1:6,21:29:63.17:1227,63,0	1/1:4,18:23:48.12:915,48,0	1/1:4,13:18:39.05:763,39,0	1/1:5,27:32:72.25:1448,72,0	1/1:4,14:18:39.13:776,39,0	1/1:9,17:27:54.17:1036,54,0	1/1:3,14:17:30.10:603,30,0	1/1:0,17:17:48.16:965,48,0
chr10	28697188	.	GCTC	G	2427.41	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.682;DP=688;FS=1.793;HRun=0;HaplotypeScore=96.9901;InbreedingCoeff=0.9989;MQ=88.18;MQ0=0;MQRankSum=0.423;QD=35.70;ReadPosRankSum=3.557;VQSLOD=4.2024;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,135,3011	0/0:9,0:9:24.07:0,24,501	0/0:18,0:18:48.16:0,48,1071	0/0:37,0:37:99:0,99,2101	0/0:21,0:21:57.07:0,57,1117	0/0:21,0:21:60.21:0,60,1340	0/0:24,0:24:66.19:0,66,1396	0/0:31,0:31:90.28:0,90,1914	0/0:32,0:32:96.33:0,96,2119	0/0:18,0:18:51.18:0,51,1154	0/0:18,0:18:48.10:0,48,1022	0/0:20,0:20:60.20:0,60,1312	0/0:18,0:18:51.18:0,51,1155	0/0:22,0:22:66.22:0,66,1434	0/0:18,0:18:54.19:0,54,1168	0/0:21,0:21:63.22:0,63,1428	1/1:1,40:41:90.31:1500,90,0	1/1:1,26:27:63.22:1049,63,0	0/0:28,0:28:84.29:0,84,1856	0/0:17,0:17:51.18:0,51,1154	0/0:36,0:36:99:0,102,2244	0/0:19,0:19:45.15:0,45,1018	0/0:28,0:28:81.24:0,81,1778	0/0:35,0:35:96.33:0,96,2170	0/0:16,0:16:48.16:0,48,1069	0/0:18,0:18:54.19:0,54,1202	0/0:31,0:31:90.27:0,90,1989	0/0:18,0:18:54.19:0,54,1213
chr10	28697377	.	T	TA	1074.14	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=-6.736;DP=548;FS=4.249;HRun=7;HaplotypeScore=52.1976;InbreedingCoeff=0.8676;MQ=75.52;MQ0=0;MQRankSum=1.383;QD=19.53;ReadPosRankSum=0.485;VQSLOD=3.1457;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:69.10:0,69,666	0/0:10,0:10:24.03:0,24,232	0/0:18,0:18:31.92:0,32,294	0/1:13,0:13:0.64:1,0,166	0/0:32,0:32:93.15:0,93,898	0/0:25,0:25:72.12:0,72,695	0/0:10,0:10:24.03:0,24,232	0/0:38,0:38:93.12:0,93,889	0/0:20,0:20:57.09:0,57,550	0/0:29,0:29:81.12:0,81,776	0/0:20,0:20:57.09:0,57,550	0/0:16,0:16:39.06:0,39,377	0/0:10,0:10:27.04:0,27,261	0/0:17,0:17:45.07:0,45,435	0/0:14,0:14:39.05:0,39,370	0/0:15,0:15:45.07:0,45,435	1/1:2,22:24:57.17:689,57,0	1/1:3,15:18:42.13:506,42,0	0/0:8,0:8:24.04:0,24,232	0/0:25,0:25:72.12:0,72,695	0/0:11,0:11:27.04:0,27,261	0/0:16,0:16:42.06:0,42,406	0/0:21,0:21:60.10:0,60,579	0/0:17,0:17:42.07:0,42,406	0/0:43,0:43:99:0,123,1178	0/0:16,0:16:39.06:0,39,376	0/0:20,0:19:57.09:0,57,550	0/0:17,0:17:45.01:0,45,419
chr10	28697789	.	C	CA	818.21	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=7.721;DP=465;FS=0.929;HRun=1;HaplotypeScore=40.6903;InbreedingCoeff=0.7744;MQ=54.27;MQ0=51;MQRankSum=-5.527;QD=16.70;ReadPosRankSum=-0.983;VQSLOD=3.3514;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:25:75.24:0,75,973	0/0:10,0:10:30.07:0,30,372	0/1:20,0:7:31:31,0,151	0/0:16,0:11:33.10:0,33,406	0/0:20,0:17:51.15:0,51,647	0/0:24,0:24:69.22:0,69,894	0/0:8,0:8:17.99:0,18,213	0/0:14,0:14:42.11:0,42,518	0/0:13,0:11:33.11:0,33,428	0/0:16,0:14:42.14:0,42,545	0/0:16,0:14:36.07:0,36,467	0/0:12,0:10:27.09:0,27,350	0/0:15,0:8:24.08:0,24,312	0/0:12,0:8:24.08:0,24,312	0/0:10,0:10:27.09:0,27,350	0/0:18,0:15:39.13:0,39,506	1/1:2,14:15:36.08:513,36,0	1/1:2,11:10:27.09:404,27,0	0/0:18,0:16:42.14:0,42,545	0/0:21,0:20:60.20:0,60,779	0/0:30,0:30:90.27:0,90,1152	0/0:21,0:18:54.16:0,54,682	0/0:14,0:13:39.13:0,39,504	0/0:21,0:17:48.16:0,48,622	0/0:14,0:11:30.10:0,30,390	0/0:14,0:12:36.12:0,36,467	0/0:16,0:13:39.13:0,39,505	0/0:15,0:15:45.15:0,45,584
chr10	28698418	.	A	AAATAGTAGTAGTAGTAGT	14403.24	PASS	AB=0.984;AC=29;AF=0.518;AN=56;BaseQRankSum=-3.624;DP=551;FS=4.875;HRun=0;HaplotypeScore=190.1781;InbreedingCoeff=-0.6811;MQ=68.22;MQ0=0;MQRankSum=-8.615;QD=28.13;ReadPosRankSum=-5.426;VQSLOD=2.2641;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:26:93.86:832,0,94	1/1:9,0:9:2.69:235,3,0	0/0:23,0:21:27.06:0,27,405	0/0:16,0:15:14.11:0,14,184	0/1:25,0:25:45.92:223,0,46	0/1:30,0:30:99:674,0,142	0/1:20,0:20:74.89:408,0,75	0/1:38,0:37:99:286,0,246	0/1:17,0:17:77.92:220,0,78	0/1:22,0:22:99:907,0,114	0/1:23,0:23:96.88:409,0,97	0/1:15,0:15:23.90:1375,0,24	0/1:23,0:23:75.89:686,0,76	0/1:19,0:19:92.39:914,0,92	0/1:21,0:21:17.97:211,0,18	0/1:15,0:15:31.93:692,0,32	1/1:10,0:10:12.04:416,12,0	0/1:13,0:13:76.89:312,0,77	0/1:8,0:8:7.92:662,0,8	0/1:25,0:25:60.99:386,0,61	1/1:14,0:14:3.92:261,4,0	0/1:21,0:21:51.90:920,0,52	0/1:24,0:24:60.93:224,0,61	0/1:11,0:11:15.01:200,0,15	0/1:29,0:29:97.85:915,0,98	0/1:13,14:31:47.47:894,0,47	0/1:18,0:18:22.93:922,0,23	0/1:5,0:5:17.97:219,0,18
chr10	28698420	.	A	ATAGTAGTAGTAGTAGTAG	35166.37	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-1.911;DP=707;FS=1.540;HRun=0;HaplotypeScore=252.1168;InbreedingCoeff=0.7479;MQ=60.57;MQ0=0;MQRankSum=-2.971;QD=52.49;ReadPosRankSum=2.501;VQSLOD=4.4302;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:16,12:31:21.07:1512,21,0	1/1:7,6:13:14.63:1228,15,0	0/0:21,0:19:12.04:0,12,238	0/0:16,0:15:5.99:0,6,49	1/1:17,14:32:12.04:861,12,0	1/1:20,18:40:33.11:2483,33,0	1/1:24,0:24:18.03:778,18,0	1/1:50,0:47:57.11:1355,57,0	1/1:20,5:31:21.07:1602,21,0	1/1:19,8:30:48.15:2196,48,0	1/1:20,9:32:15.05:1108,15,0	1/1:10,8:18:21.07:1752,21,0	1/1:14,13:30:24.08:1998,24,0	1/1:15,8:23:21.07:1626,21,0	1/1:16,0:29:12.04:897,12,0	1/1:7,9:16:12.04:1005,12,0	1/1:7,0:12:15.05:566,15,0	1/1:10,0:17:18.06:638,18,0	1/1:5,4:11:24.08:1110,24,0	1/1:30,0:30:36.06:1257,36,0	1/1:14,0:14:12:197,12,0	1/1:11,13:25:18.06:1445,18,0	1/1:15,14:29:9.03:682,9,0	1/1:12,0:12:6.02:250,6,0	1/1:16,21:41:24.08:1838,24,0	1/1:40,1:41:85.77:3276,86,0	1/1:19,9:30:39.13:2930,39,0	1/1:9,0:9:12.04:576,12,0
chr10	28698421	.	T	TAGTAGTAGTAGTAGTAGT	35302.53	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-1.909;DP=713;FS=1.549;HRun=0;HaplotypeScore=251.8046;InbreedingCoeff=0.7533;MQ=58.77;MQ0=1;MQRankSum=-2.977;QD=52.22;ReadPosRankSum=2.621;VQSLOD=4.4244;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:31,0:31:21.07:1512,21,0	1/1:13,0:13:14.63:1228,15,0	0/0:19,0:16:12.04:0,12,238	0/0:18,0:16:5.99:0,6,49	1/1:33,0:33:12.04:861,12,0	1/1:41,0:41:33.11:2483,33,0	1/1:24,0:24:18.03:778,18,0	1/1:51,0:48:57.11:1355,57,0	1/1:31,0:31:21.07:1602,21,0	1/1:30,0:30:48.15:2196,48,0	1/1:30,0:30:15.05:1108,15,0	1/1:18,0:18:21.07:1752,21,0	1/1:30,0:30:24.08:1998,24,0	1/1:23,0:23:21.07:1626,21,0	1/1:29,0:29:12.04:897,12,0	1/1:16,0:16:12.04:1005,12,0	1/1:12,0:12:15.05:566,15,0	1/1:17,0:17:18.06:638,18,0	1/1:11,0:11:24.08:1110,24,0	1/1:30,0:30:36.06:1257,36,0	1/1:14,0:14:15.01:333,15,0	1/1:24,0:24:18.06:1445,18,0	1/1:29,0:29:9.03:682,9,0	1/1:12,0:12:6.02:250,6,0	1/1:42,0:42:24.08:1838,24,0	1/1:41,0:41:85.77:3276,86,0	1/1:30,0:30:39.13:2930,39,0	1/1:6,2:14:12.04:576,12,0
chr10	28698427	.	T	TAGTAGTAGTAGTAGTAGT	34970.60	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-1.916;DP=704;FS=1.579;HRun=0;HaplotypeScore=248.4915;InbreedingCoeff=0.7393;MQ=56.37;MQ0=1;MQRankSum=-2.977;QD=52.59;ReadPosRankSum=2.344;VQSLOD=4.4211;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:32,0:32:24.08:1548,24,0	1/1:12,0:12:14.63:1228,15,0	0/0:19,0:16:12.04:0,12,238	0/0:20,0:17:5.24:0,5,47	1/1:32,0:32:12.04:861,12,0	1/1:41,0:41:33.11:2483,33,0	1/1:21,0:21:18.03:778,18,0	1/1:52,0:49:57.11:1355,57,0	1/1:29,0:29:21.07:1602,21,0	1/1:29,0:29:48.15:2196,48,0	1/1:27,0:27:15.05:1108,15,0	1/1:18,0:18:21.07:1752,21,0	1/1:32,0:32:24.08:1998,24,0	1/1:21,0:21:21.07:1626,21,0	1/1:28,0:28:12.04:897,12,0	1/1:16,0:16:12.04:1005,12,0	1/1:12,0:12:12.04:451,12,0	1/1:17,0:17:18.06:638,18,0	1/1:11,0:11:21.07:856,21,0	1/1:22,8:34:36.06:1257,36,0	1/1:15,0:15:15.01:333,15,0	1/1:22,0:22:18.06:1445,18,0	1/1:27,0:27:9.03:682,9,0	1/1:11,0:11:6.02:250,6,0	1/1:43,0:43:24.08:1838,24,0	1/1:42,0:42:85.77:3276,86,0	1/1:27,0:27:39.13:2930,39,0	1/1:14,0:14:12.04:576,12,0
chr10	28699171	.	AGTGGGTGG	A	555.40	PASS	AC=30;AF=0.882;AN=34;BaseQRankSum=-0.711;DP=113;FS=0.000;HRun=0;HaplotypeScore=29.4354;InbreedingCoeff=0.0888;MQ=98.97;MQ0=4;MQRankSum=-0.711;QD=10.29;ReadPosRankSum=2.369;VQSLOD=0.7946;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:4:1.25:34,1,0	1/1:3,0:2:3.01:50,3,0	0/0:11,0:6:2.80:0,3,13	./.	./.	1/1:2,0:2:2.99:24,3,0	1/1:4,0:4:3.01:47,3,0	./.	./.	1/1:2,0:1:3.01:48,3,0	./.	1/1:5,0:5:2.98:22,3,0	1/1:3,0:3:3.01:38,3,0	1/1:3,0:3:3.01:41,3,0	1/1:4,0:4:3.01:50,3,0	1/1:2,0:2:3.01:50,3,0	1/1:5,0:5:3.01:36,3,0	0/0:2,0:2:3.01:0,3,76	./.	./.	./.	1/1:3,3:6:2.98:77,3,0	./.	1/1:2,0:2:2.94:18,3,0	1/1:3,2:5:3.01:77,3,0	1/1:4,0:4:3.01:36,3,0	./.	./.
chr10	28700244	.	AATCT	A	1745.58	PASS	AB=0.927;AC=21;AF=0.375;AN=56;BaseQRankSum=4.182;DP=804;FS=63.116;HRun=0;HaplotypeScore=203.7167;InbreedingCoeff=-0.6015;MQ=64.04;MQ0=28;MQRankSum=-3.871;QD=3.13;ReadPosRankSum=-1.430;VQSLOD=0.5981;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:39,1:40:99:100,0,554	0/0:11,0:10:20.48:0,20,201	0/0:57,0:19:15.47:0,15,313	0/0:76,0:26:28.73:0,29,283	0/1:30,0:30:88.78:89,0,441	0/1:28,1:31:23.40:23,0,374	0/0:17,0:16:14.49:0,14,216	0/0:30,0:30:27.72:0,28,533	0/1:22,0:22:97.67:98,0,237	0/1:22,2:24:45.66:46,0,533	0/1:21,0:21:28.91:29,0,345	0/1:10,8:18:99:138,0,168	0/1:29,1:29:99:130,0,221	0/1:27,0:27:56.44:56,0,239	0/0:34,0:34:64.61:0,65,578	0/1:20,0:20:46.41:46,0,233	0/1:24,1:24:99:195,0,239	0/1:19,1:19:99:137,0,227	0/1:27,0:25:42.45:42,0,369	0/1:21,3:23:33.67:34,0,334	0/1:34,1:35:99:155,0,418	0/0:21,0:22:48.54:0,49,456	0/1:27,2:29:88.28:88,0,374	0/1:20,1:21:99:118,0,143	0/1:12,0:19:17.23:17,0,233	0/1:46,0:46:99:215,0,693	0/1:19,2:28:17.91:18,0,374	0/1:16,1:19:99:131,0,201
chr10	28700245	.	ATCTC	A	3667.26	PASS	AB=0.876;AC=29;AF=0.537;AN=54;BaseQRankSum=-4.817;DP=805;FS=17.677;HRun=0;HaplotypeScore=199.8360;InbreedingCoeff=-0.1548;MQ=63.17;MQ0=29;MQRankSum=-0.375;QD=6.39;ReadPosRankSum=-2.915;VQSLOD=1.2313;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:37,1:39:14.59:179,0,15	0/0:7,0:10:10.98:0,11,49	./.	0/0:75,0:25:0:0,0,0	0/1:25,4:30:1.12:201,0,1	0/1:21,1:31:52.85:53,0,157	0/1:13,0:16:3.49:45,0,3	0/0:34,0:33:4.12:0,4,18	0/1:15,7:23:8.87:227,0,9	0/1:23,0:23:91.14:116,0,91	0/1:21,1:22:24.79:126,0,25	1/1:17,1:18:5.28:177,5,0	1/1:18,12:29:17.89:231,18,0	1/1:12,13:25:4.03:147,4,0	0/0:16,0:32:25.37:0,25,117	1/1:13,6:20:2.39:174,2,0	0/1:19,5:24:3.33:339,0,3	0/1:19,1:18:0.33:152,0,0	0/1:26,3:27:8.99:128,0,9	1/1:21,1:22:11.57:171,12,0	0/1:35,0:35:28.31:129,0,28	0/0:18,0:22:11.69:0,12,79	0/1:20,10:30:34.91:198,0,35	1/1:12,3:21:14.74:198,15,0	0/1:18,0:19:13.90:44,0,14	0/1:31,13:46:30.59:444,0,31	0/1:26,0:28:57.03:57,0,124	1/1:18,0:19:2.39:131,2,0
chr10	28700405	.	G	GTGTC	2098.51	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-4.744;DP=773;FS=0.674;HRun=0;HaplotypeScore=133.0243;InbreedingCoeff=0.9963;MQ=65.67;MQ0=3;MQRankSum=-0.696;QD=48.80;ReadPosRankSum=1.184;VQSLOD=4.5283;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,114,1896	0/0:10,0:10:27.06:0,27,424	0/0:25,0:23:19.70:0,20,513	0/0:35,0:27:33.56:0,34,453	0/0:20,0:20:48.09:0,48,761	0/0:34,0:34:81.22:0,81,1301	0/0:25,0:25:69.19:0,69,1153	0/0:33,0:32:69.15:0,69,964	0/0:32,0:32:84.28:0,84,1417	0/0:38,0:38:99:0,105,1776	0/0:25,0:25:63.16:0,63,1060	0/0:20,0:20:60.20:0,60,1003	0/0:41,0:41:99:0,120,1948	0/0:25,0:25:66.21:0,66,1102	0/0:31,0:31:72.25:0,72,1236	0/0:21,0:21:57.17:0,57,904	1/1:7,18:26:48.16:1183,48,0	1/1:2,15:17:42.14:1038,42,0	0/0:29,0:29:66.18:0,66,1019	0/0:19,0:19:51.17:0,51,872	0/0:41,0:41:90.30:0,90,1514	0/0:33,0:33:72.24:0,72,1208	0/0:15,0:15:42.14:0,42,721	0/0:38,0:38:99:0,105,1753	0/0:15,0:15:39.12:0,39,644	0/0:42,0:42:99:0,105,1662	0/0:25,0:25:72.22:0,72,1170	0/0:11,0:11:33.08:0,33,536
chr10	28700738	.	A	AAC	2081.08	PASS	AB=0.865;AC=30;AF=0.577;AN=52;BaseQRankSum=-1.736;DP=638;FS=3.410;HRun=0;HaplotypeScore=104.5253;InbreedingCoeff=-0.4531;MQ=62.61;MQ0=19;MQRankSum=-1.477;QD=3.96;ReadPosRankSum=0.459;VQSLOD=2.4352;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:35,0:36:12.52:128,0,13	1/1:6,0:6:2.24:10,2,0	./.	./.	0/1:9,6:16:52.47:77,0,52	0/1:11,4:15:32.85:36,0,33	0/1:25,7:32:41.20:82,0,41	1/1:22,0:18:3.74:12,4,0	0/1:22,2:23:26.37:126,0,26	0/1:25,0:25:13.77:52,0,14	1/1:10,8:18:12.04:169,12,0	0/1:20,0:19:5.15:16,0,5	0/1:16,2:18:11.57:97,0,12	0/1:15,2:16:21.61:82,0,22	0/1:21,8:30:23.28:80,0,23	0/1:21,1:23:79.34:122,0,79	0/0:33,0:33:34.46:0,34,375	0/0:18,0:19:17.36:0,17,175	1/1:18,0:16:3.94:28,4,0	0/1:13,4:16:23.28:58,0,23	0/1:38,1:37:99:113,0,114	1/1:15,0:25:11.86:104,12,0	0/1:10,3:13:11.38:201,0,11	0/1:40,4:44:64.88:236,0,65	1/1:5,4:10:12.92:161,13,0	0/1:24,0:23:22.86:62,0,23	0/1:14,6:20:74.70:143,0,75	0/1:3,6:9:25.69:38,0,26
chr10	28702090	.	G	GCA	3746.22	PASS	AB=0.768;AC=33;AF=0.611;AN=54;BaseQRankSum=-5.507;DP=696;FS=8.175;HRun=0;HaplotypeScore=103.5676;InbreedingCoeff=-0.3111;MQ=60.09;MQ0=28;MQRankSum=-0.692;QD=6.54;ReadPosRankSum=1.081;VQSLOD=2.7852;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:28,1:36:0.73:49,1,0	1/1:8,0:8:5.88:59,6,0	./.	0/1:68,0:24:0:0,0,0	0/1:9,5:14:32.50:32,0,85	0/1:15,0:15:0.63:1,0,47	0/1:18,12:31:37.11:323,0,37	1/1:19,0:19:5.99:58,6,0	0/1:13,11:24:73.43:198,0,73	1/1:12,6:21:21.04:257,21,0	0/1:14,6:22:83.58:136,0,84	0/1:14,10:24:69.89:240,0,70	0/1:9,1:11:35.42:35,0,56	0/1:22,9:31:99:270,0,138	0/1:12,9:22:56.20:305,0,56	1/1:8,3:12:3.01:45,3,0	0/0:28,0:29:22.91:0,23,339	0/0:11,0:16:23.34:0,23,185	1/1:12,3:15:9.03:131,9,0	0/1:8,3:11:26.83:39,0,27	0/1:21,12:35:44.77:77,0,45	1/1:14,6:20:5.76:89,6,0	0/1:10,5:16:34.62:77,0,35	0/1:16,18:36:7.99:450,0,8	0/1:9,3:13:51.21:77,0,51	0/1:18,7:27:41.66:212,0,42	1/1:12,6:18:21.07:305,21,0	0/1:9,10:20:72.62:279,0,73
chr10	28706053	.	ATG	A	227.46	PASS	AB=0.829;AC=3;AF=0.054;AN=56;BaseQRankSum=6.885;DP=837;FS=28.491;HRun=0;HaplotypeScore=188.0608;InbreedingCoeff=-0.0614;MQ=45.58;MQ0=38;MQRankSum=-6.230;QD=3.03;ReadPosRankSum=0.300;VQSLOD=1.1119;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:31:42.62:0,43,829	0/0:7,0:7:15.05:0,15,304	0/0:43,0:11:15.02:0,15,425	0/0:51,0:17:35.74:0,36,698	0/0:22,1:22:31.09:0,31,641	0/0:14,4:16:6.96:0,7,123	0/0:35,7:41:62.96:0,63,1321	0/0:26,2:25:29.90:0,30,1295	0/0:21,3:23:27.55:0,28,547	0/0:34,0:33:99:0,99,1960	0/0:21,1:22:33.22:0,33,615	0/0:32,8:39:38.50:0,38,777	0/0:27,4:30:49.84:0,50,923	0/0:26,7:32:32.81:0,33,635	0/0:29,13:42:26.67:0,27,547	0/0:34,9:42:38.24:0,38,640	0/0:22,0:21:41.89:0,42,521	0/0:16,0:16:36.01:0,36,466	0/1:18,2:18:49.52:50,0,683	0/0:22,0:21:57.03:0,57,1133	0/0:83,2:80:99:0,137,2669	0/0:22,0:21:27.69:0,28,464	0/0:25,0:24:41.54:0,42,800	0/0:27,3:29:36.02:0,36,726	0/0:14,0:14:33.11:0,33,637	0/1:28,8:33:99:161,0,1422	0/1:13,6:18:99:117,0,393	0/0:9,0:9:27.09:0,27,508
chr10	28706094	.	CAT	C	5110.44	PASS	AB=0.988;AC=36;AF=0.643;AN=56;BaseQRankSum=3.332;DP=1170;FS=0.418;HRun=0;HaplotypeScore=247.5629;InbreedingCoeff=-0.2421;MQ=42.12;MQ0=47;MQRankSum=4.519;QD=4.85;ReadPosRankSum=7.952;VQSLOD=3.3787;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:50,0:47:40.01:190,0,40	1/1:18,0:17:1.39:106,1,0	0/0:55,0:11:23.96:0,24,322	0/0:60,1:9:15.63:0,16,140	1/1:37,0:36:19.90:167,20,0	1/1:27,0:25:16.47:74,16,0	0/1:48,0:47:99:126,0,144	0/1:36,0:26:49.69:50,0,211	1/1:39,2:39:32.40:286,32,0	0/1:56,0:55:34.15:322,0,34	1/1:33,0:33:14.72:125,15,0	0/1:35,0:34:15.73:163,0,16	0/1:33,0:31:13.84:173,0,14	1/1:38,1:37:19.81:207,20,0	0/1:43,0:42:7.72:99,0,8	1/1:46,0:45:2.36:195,2,0	0/1:37,0:35:99:212,0,102	0/1:27,0:27:55.28:187,0,55	0/1:19,1:19:58.65:152,0,59	0/1:35,1:35:68.35:178,0,68	1/1:127,1:120:19.43:707,19,0	1/1:50,0:47:23.65:213,24,0	1/1:35,0:33:34.65:179,35,0	0/1:40,0:39:16.51:140,0,17	0/1:32,1:33:2.25:172,0,2	0/1:58,0:55:28.31:402,0,28	0/1:25,1:25:23.94:134,0,24	0/1:21,1:22:2.12:149,0,2
chr10	28706096	.	TAC	T	15310.21	PASS	AB=0.770;AC=50;AF=0.893;AN=56;BaseQRankSum=-8.897;DP=1190;FS=14.248;HRun=0;HaplotypeScore=219.9829;InbreedingCoeff=0.3247;MQ=42.19;MQ0=48;MQRankSum=8.571;QD=14.32;ReadPosRankSum=0.916;VQSLOD=3.4005;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:21,33:51:72.10:857,72,0	1/1:12,6:17:17.92:212,18,0	0/0:57,0:11:0.50:0,1,175	0/0:63,0:10:3.04:0,3,52	1/1:23,14:36:32.58:375,33,0	1/1:8,17:23:18.05:221,18,0	1/1:26,23:48:51.07:614,51,0	0/1:29,8:27:9.79:243,0,10	1/1:15,27:41:69.01:817,69,0	0/1:34,21:55:99:791,0,103	1/1:22,12:35:30.08:366,30,0	1/1:21,12:32:33.19:459,33,0	1/1:16,17:31:32.43:439,32,0	1/1:18,22:38:45.14:551,45,0	1/1:24,17:42:28.31:335,28,0	1/1:24,23:47:56.94:668,57,0	1/1:19,18:35:26.17:556,26,0	1/1:14,16:30:11.84:633,12,0	1/1:10,9:18:33.57:404,34,0	1/1:26,11:36:0.77:434,1,0	1/1:42,86:119:99:2530,211,0	1/1:27,23:47:48.15:586,48,0	1/1:21,14:33:37.80:425,38,0	1/1:17,26:42:48.15:589,48,0	1/1:22,12:34:36.10:431,36,0	1/1:33,25:55:23.09:969,23,0	1/1:14,11:24:5.30:398,5,0	1/1:12,10:22:8.08:407,8,0
chr10	28706259	.	G	GCA	12588.39	PASS	AB=0.744;AC=29;AF=0.537;AN=54;BaseQRankSum=-7.271;DP=939;FS=0.804;HRun=0;HaplotypeScore=156.5167;InbreedingCoeff=-0.5547;MQ=50.63;MQ0=32;MQRankSum=4.721;QD=15.37;ReadPosRankSum=-0.615;VQSLOD=4.8507;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:41,9:48:99:636,0,173	0/1:7,3:10:54.21:116,0,54	./.	0/1:56,0:12:11.09:77,0,11	1/1:18,12:30:31.70:483,32,0	0/1:3,14:16:42.24:300,0,42	0/1:33,16:49:18.70:1020,0,19	0/1:29,11:38:83.96:385,0,84	0/1:23,19:42:99:680,0,142	0/1:20,7:25:5.23:617,0,5	1/1:9,6:16:23.76:350,24,0	0/1:10,17:26:41.86:299,0,42	0/1:16,6:22:33.77:460,0,34	0/1:10,20:31:11.94:729,0,12	1/1:8,20:29:7.15:551,7,0	0/1:23,14:35:40.78:726,0,41	0/0:48,0:50:69.88:0,70,970	0/0:30,0:31:39.37:0,39,529	0/1:8,9:15:42.61:267,0,43	0/1:17,8:24:24.14:507,0,24	0/1:69,23:88:99:1113,0,282	0/1:22,9:27:15.98:189,0,16	0/1:16,4:20:65.76:210,0,66	0/1:36,19:53:68.04:1181,0,68	0/1:8,9:18:22.63:125,0,23	1/1:22,11:30:9.52:684,10,0	0/1:25,6:31:37.89:631,0,38	0/1:6,5:11:45.25:251,0,45
chr10	28709403	.	AAAAAAAAAAAAAGAAAG	A	1849.23	PASS	AC=4;AF=0.074;AN=54;BaseQRankSum=5.192;DP=496;FS=0.974;HRun=0;HaplotypeScore=173.9626;InbreedingCoeff=0.7672;MQ=39.52;MQ0=24;MQRankSum=-3.160;QD=33.62;ReadPosRankSum=4.127;VQSLOD=2.7788;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:39:86.82:0,87,4024	0/0:13,0:11:8.39:0,8,471	./.	0/0:11,0:1:3:0,3,26	0/0:26,0:24:30.10:0,30,1273	0/0:21,0:18:22.60:0,23,888	0/0:20,0:16:8.21:0,8,413	0/0:36,0:32:78.15:0,78,1714	0/0:16,0:13:21.07:0,21,928	0/0:19,0:18:45.12:0,45,1660	0/0:14,0:14:39.11:0,39,2075	0/0:10,0:10:18.06:0,18,1148	0/0:10,0:10:21.06:0,21,1022	0/0:13,0:12:21.04:0,21,702	0/0:17,0:12:29.69:0,30,1801	0/0:8,0:7:15.02:0,15,374	1/1:7,31:34:21.04:1450,21,0	1/1:1,16:17:12:514,12,0	0/0:18,0:18:48.06:0,48,1353	0/0:14,0:14:30.09:0,30,1536	0/0:10,0:9:24.04:0,24,630	0/0:14,0:14:36.01:0,36,1081	0/0:15,0:11:24.05:0,24,1048	0/0:15,0:8:6.49:0,6,404	0/0:19,0:19:51.62:0,52,2114	0/0:23,0:21:60.17:0,60,2280	0/0:18,0:15:36.02:0,36,1244	0/0:6,0:4:9.03:0,9,522
chr10	28712271	.	T	TGC	604.65	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=-9.540;DP=629;FS=9.123;HRun=0;HaplotypeScore=119.5594;InbreedingCoeff=0.5999;MQ=64.46;MQ0=0;MQRankSum=0.164;QD=17.28;ReadPosRankSum=-6.840;VQSLOD=0.9360;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:75.67:0,76,740	0/1:11,0:11:1.01:1,0,145	0/0:8,0:8:9.01:0,9,93	0/0:9,0:6:5.99:0,6,61	0/0:24,0:24:62.65:0,63,476	0/0:18,0:18:47.78:0,48,372	0/0:33,0:33:35.15:0,35,557	1/1:7,17:24:53.67:699,54,0	0/0:24,0:24:13.81:0,14,407	0/0:34,0:34:58.20:0,58,580	0/0:19,0:19:56.68:0,57,434	0/0:15,0:15:32.25:0,32,246	0/0:19,0:19:25.77:0,26,344	0/0:22,0:22:62.52:0,63,452	0/0:21,0:21:50.72:0,51,381	0/0:21,0:20:8.77:0,9,317	0/0:21,0:21:47.67:0,48,367	0/0:21,0:21:41.71:0,42,314	0/0:17,0:17:9.67:0,10,179	0/0:20,0:20:47.85:0,48,394	0/0:43,0:43:47.57:0,48,637	0/0:21,0:21:13.73:0,14,240	0/0:23,0:23:15.81:0,16,363	0/0:24,0:24:62.64:0,63,471	0/0:27,0:26:72.08:0,72,542	0/0:33,0:33:40.44:0,40,623	0/0:32,0:31:67.48:0,67,707	0/0:8,0:8:17.92:0,18,138
chr10	28712990	.	AGAAGGGGAAGGGAAAGGAGG	A	111.63	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=2.398;DP=463;FS=1.803;HRun=0;HaplotypeScore=192.1020;InbreedingCoeff=0.7126;MQ=68.18;MQ0=13;MQRankSum=-0.864;QD=6.57;ReadPosRankSum=-2.055;VQSLOD=2.6674;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:22:63.21:0,63,2581	0/0:5,0:5:9.03:0,9,225	0/0:59,0:31:23:0,23,1234	0/0:66,0:27:16.24:0,16,1002	0/0:16,0:16:48.13:0,48,2183	0/0:8,0:8:21.06:0,21,915	0/0:14,0:14:24.08:0,24,1002	0/0:18,0:16:24.08:0,24,683	0/0:9,0:9:21.07:0,21,1025	0/0:9,0:9:21.07:0,21,1104	0/0:9,0:9:18.06:0,18,935	0/0:10,0:10:30.10:0,30,1373	0/0:14,0:14:29.89:0,30,1154	0/0:13,0:13:36.12:0,36,1471	0/0:17,0:17:36.12:0,36,1662	0/0:16,0:16:45.15:0,45,1712	1/1:7,0:7:3.01:41,3,0	1/1:1,9:10:3.01:165,3,0	0/0:11,0:9:21.07:0,21,1197	0/0:16,0:16:36.12:0,36,1726	0/0:27,0:27:75.19:0,75,3683	0/0:8,0:8:24.08:0,24,1149	0/0:17,0:17:48.16:0,48,2165	0/0:11,0:11:30.10:0,30,1729	0/0:16,0:16:42.14:0,42,1810	0/0:14,0:14:39.11:0,39,2227	0/0:13,0:13:33.11:0,33,1271	0/0:3,0:3:9.03:0,9,548
chr10	28713029	.	GGGGAA	G	64.66	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=4.920;DP=409;FS=1.239;HRun=0;HaplotypeScore=73.0493;InbreedingCoeff=0.2874;MQ=68.57;MQ0=19;MQRankSum=-1.408;QD=0.67;ReadPosRankSum=-2.171;VQSLOD=0.9972;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:46.04:0,46,1304	0/0:4,0:3:9.03:0,9,221	0/0:51,0:17:25.65:0,26,690	0/1:71,0:31:8.74:9,0,597	0/0:12,0:12:27.09:0,27,781	0/0:9,0:9:24.08:0,24,684	0/0:13,0:12:30.10:0,30,912	0/0:13,0:9:12.04:0,12,298	0/0:10,0:10:30.10:0,30,821	0/0:9,0:9:27.08:0,27,710	0/0:5,0:5:12.04:0,12,369	0/0:11,0:11:27.09:0,27,827	0/0:8,0:8:11.96:0,12,359	0/0:11,0:10:26.12:0,26,654	0/0:11,0:11:24.08:0,24,678	0/0:6,0:6:18.06:0,18,411	1/1:1,6:7:9.83:144,10,0	0/1:8,0:8:10.18:10,0,31	0/0:12,0:8:15.05:0,15,318	0/0:9,0:9:27.09:0,27,733	0/0:38,0:38:61.35:0,61,2598	0/0:3,0:3:9.03:0,9,238	0/0:18,0:18:45.15:0,45,1156	0/0:19,0:19:54.18:0,54,1480	0/1:10,0:10:7.66:8,0,717	0/0:11,0:11:30.10:0,30,843	0/0:11,0:11:24.04:0,24,602	0/0:3,0:3:9.03:0,9,212
chr10	28715618	.	A	AC	15138	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-6.702;DP=638;FS=18.875;HRun=7;HaplotypeScore=59.4777;InbreedingCoeff=0.9433;MQ=80.51;MQ0=1;MQRankSum=-8.397;QD=25.57;ReadPosRankSum=5.137;VQSLOD=3.2543;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:10,30:40:69.21:833,69,0	1/1:2,15:17:24.77:480,25,0	0/0:21,0:21:44.66:0,45,393	0/0:25,0:24:28.37:0,28,327	1/1:2,18:20:45.14:543,45,0	1/1:1,20:21:54.17:652,54,0	1/1:9,32:41:74.90:881,75,0	1/1:5,18:23:48.10:554,48,0	1/1:3,22:25:42.13:507,42,0	1/1:1,18:19:28.17:601,28,0	1/1:3,13:17:24.07:290,24,0	1/1:4,22:26:48.15:580,48,0	1/1:1,15:16:33.08:398,33,0	1/1:4,25:29:46.35:832,46,0	1/1:1,16:17:33.10:399,33,0	1/1:3,8:11:21.06:254,21,0	1/1:4,25:29:66.20:797,66,0	1/1:0,26:26:60.18:725,60,0	1/1:1,14:15:42.13:503,42,0	1/1:3,18:21:45.14:543,45,0	1/1:7,32:38:78.24:942,78,0	1/1:5,26:31:75.23:905,75,0	1/1:0,13:13:30.09:362,30,0	1/1:6,18:24:48.15:580,48,0	1/1:0,11:11:30.09:362,30,0	1/1:3,29:32:87.25:1037,87,0	1/1:5,21:25:42.13:506,42,0	1/1:0,3:3:6.02:72,6,0
chr10	28716747	.	T	TTTTGTTTG	23279.32	PASS	AB=0.633;AC=51;AF=0.911;AN=56;BaseQRankSum=-2.215;DP=733;FS=9.370;HRun=0;HaplotypeScore=147.6469;InbreedingCoeff=0.6817;MQ=62.22;MQ0=2;MQRankSum=-2.142;QD=34.28;ReadPosRankSum=2.977;VQSLOD=3.9903;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:27,11:43:23.03:1065,23,0	1/1:2,4:7:9.02:272,9,0	0/0:27,0:20:9.03:0,9,186	0/0:27,0:25:27:0,27,538	1/1:15,17:32:42.14:1213,42,0	1/1:13,10:23:27.09:1077,27,0	1/1:13,9:23:15.05:617,15,0	1/1:31,0:29:33.10:836,33,0	1/1:9,0:20:13.29:388,13,0	1/1:21,21:46:75.14:2182,75,0	1/1:14,17:31:36.12:1226,36,0	1/1:7,17:25:27.09:1086,27,0	1/1:14,6:21:24.08:873,24,0	1/1:7,7:16:21.07:827,21,0	1/1:9,12:21:27.09:1077,27,0	1/1:7,15:23:21.07:848,21,0	1/1:16,0:48:42.77:623,43,0	0/1:8,0:19:20.63:158,0,21	1/1:17,10:27:36.12:1120,36,0	1/1:13,11:26:33.11:989,33,0	1/1:16,0:16:15.05:362,15,0	1/1:5,14:22:42.13:1078,42,0	1/1:18,17:35:33.11:1199,33,0	1/1:14,10:25:12.04:472,12,0	1/1:11,16:29:27.09:1073,27,0	1/1:22,13:34:48.12:1320,48,0	1/1:8,11:22:27.03:927,27,0	1/1:4,7:12:9.03:371,9,0
chr10	28716776	.	T	TTTG	5671.23	PASS	AB=0.979;AC=27;AF=0.482;AN=56;BaseQRankSum=13.224;DP=620;FS=1.988;HRun=0;HaplotypeScore=118.6523;InbreedingCoeff=-0.7985;MQ=46.24;MQ0=6;MQRankSum=-7.166;QD=9.98;ReadPosRankSum=5.426;VQSLOD=3.8357;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:40,0:40:99:135,0,694	0/1:8,0:8:68.17:82,0,68	0/0:23,0:8:15.05:0,15,223	0/0:28,0:16:39.13:0,39,612	0/1:24,0:24:99:319,0,368	0/1:19,0:19:99:210,0,249	0/1:21,0:21:84.18:84,0,489	0/1:19,9:26:99:325,0,554	0/1:13,0:13:41:41,0,263	0/1:43,0:43:99:500,0,638	0/1:22,0:22:99:264,0,271	0/1:22,0:22:99:217,0,194	0/1:13,0:13:99:124,0,139	0/1:14,0:14:99:139,0,177	0/1:20,0:20:99:186,0,364	0/1:20,0:20:99:158,0,312	0/1:50,0:49:99:684,0,458	0/1:16,0:16:99:178,0,150	0/1:23,0:23:99:369,0,470	0/1:20,0:20:99:169,0,296	0/1:9,6:15:99:101,0,293	0/1:17,0:17:99:217,0,139	0/1:26,0:26:99:262,0,237	0/1:23,0:23:73.47:73,0,226	0/1:22,0:22:99:209,0,209	0/1:21,0:21:99:311,0,344	0/1:24,0:23:99:211,0,323	1/1:4,0:4:9.03:102,9,0
chr10	28717063	.	G	GGAC	27597.79	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-5.653;DP=502;FS=13.925;HRun=0;HaplotypeScore=62.4482;InbreedingCoeff=0.9295;MQ=70.87;MQ0=0;MQRankSum=-7.145;QD=57.50;ReadPosRankSum=4.700;VQSLOD=6.0546;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,27:28:63.22:1507,63,0	1/1:0,6:6:18.06:437,18,0	0/0:13,0:13:36.59:0,37,657	0/0:9,0:9:5.93:0,6,236	1/1:2,16:18:36.12:882,36,0	1/1:0,22:23:51.18:1255,51,0	1/1:0,11:13:21.07:514,21,0	1/1:0,27:30:90.26:1957,90,0	1/1:0,18:18:42.14:1033,42,0	1/1:1,10:11:30.10:735,30,0	1/1:0,22:26:51.17:1216,51,0	1/1:0,23:25:57.20:1397,57,0	1/1:0,12:12:30.10:738,30,0	1/1:0,19:20:54.19:1320,54,0	1/1:0,16:18:45.15:1078,45,0	1/1:0,22:23:60.21:1471,60,0	1/1:0,21:21:51.07:1191,51,0	1/1:0,15:15:36.12:884,36,0	1/1:0,9:10:30.09:662,30,0	1/1:2,11:13:33.11:774,33,0	1/1:0,16:17:24.08:586,24,0	1/1:1,7:9:18.06:443,18,0	1/1:0,18:18:39.13:957,39,0	1/1:0,15:16:33.11:808,33,0	1/1:0,18:18:51.18:1247,51,0	1/1:1,29:30:87.30:2080,87,0	1/1:0,27:29:72.25:1760,72,0	1/1:0,13:13:27.09:664,27,0
chr10	28717376	.	AAAAAAAAAAGAAAAG	A	1746.47	PASS	AB=0.829;AC=15;AF=0.268;AN=56;BaseQRankSum=-6.700;DP=312;FS=0.000;HRun=0;HaplotypeScore=114.9597;InbreedingCoeff=-0.1899;MQ=25.74;MQ0=62;MQRankSum=-0.041;QD=11.57;ReadPosRankSum=-0.113;VQSLOD=1.5760;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:11:6.30:0,6,62	1/1:4,0:2:3.01:67,3,0	0/0:24,0:1:0.47:0,0,1	0/0:48,0:3:8.92:0,9,112	0/1:9,10:15:3.43:346,0,3	0/1:8,1:9:97.84:133,0,98	0/1:13,0:12:36.79:37,0,97	0/0:12,0:6:1.63:0,2,41	0/1:7,0:5:8.88:9,0,31	0/1:5,8:11:2.41:422,0,2	0/1:6,7:12:39.56:136,0,40	0/0:3,2:5:8.23:0,8,36	0/1:2,1:3:15.10:107,0,15	0/0:5,0:3:5.34:0,5,23	0/1:12,0:12:57.58:58,0,85	0/1:8,0:6:6.80:7,0,56	0/0:7,0:7:14.12:0,14,77	0/0:6,0:4:6.01:0,6,61	0/0:12,0:6:12.50:0,12,88	0/1:15,0:14:47.05:118,0,47	0/0:1,0:1:3.01:0,3,31	0/1:2,9:10:6.04:109,0,6	0/1:6,7:12:23.90:315,0,24	0/0:9,0:7:5.78:0,6,32	0/0:6,6:8:5.49:0,5,25	0/0:2,0:1:0:0,0,0	0/1:11,0:10:24.75:25,0,156	0/0:5,0:3:6.01:0,6,136
chr10	28717379	.	A	AG	1339.55	PASS	AB=1.000;AC=37;AF=0.661;AN=56;BaseQRankSum=1.324;DP=314;FS=0.000;HRun=0;HaplotypeScore=76.8572;InbreedingCoeff=-0.1026;MQ=29.00;MQ0=67;MQRankSum=-2.122;QD=4.82;ReadPosRankSum=0.570;VQSLOD=3.1731;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:11:17.24:115,17,0	0/0:4,0:2:2.99:0,3,24	0/0:26,0:1:0:0,0,0	0/1:53,0:7:15.43:16,0,15	0/1:19,0:15:3.73:4,0,52	1/1:8,0:8:6.37:131,6,0	1/1:13,0:12:23.97:153,24,0	1/1:6,5:6:9.65:102,10,0	0/1:6,0:4:0.08:39,0,0	0/1:13,0:11:21.48:25,0,21	1/1:13,0:12:0.57:66,1,0	1/1:5,0:5:8.81:53,9,0	0/1:3,0:3:7.80:26,0,8	1/1:4,0:2:5.95:46,6,0	0/1:11,0:11:4.37:135,0,4	1/1:7,0:5:3.66:69,4,0	1/1:8,0:7:5.22:59,5,0	1/1:7,0:4:5.80:58,6,0	0/1:11,0:6:18.95:66,0,19	1/1:13,0:12:5.38:89,5,0	0/0:3,0:1:2.92:0,3,17	0/1:11,0:10:10.76:12,0,11	0/1:13,0:12:29.40:29,0,46	1/1:9,0:6:0.48:13,0,0	1/1:11,0:7:5.88:35,6,0	0/0:3,0:1:0:0,0,0	0/1:12,0:11:44.87:114,0,45	0/1:4,0:2:23.55:24,0,35
chr10	28717918	.	G	GT	484.40	PASS	AC=14;AF=0.778;AN=18;BaseQRankSum=-0.934;DP=186;FS=0.000;HRun=1;HaplotypeScore=18.8791;MQ=33.60;MQ0=166;MQRankSum=-2.293;QD=11.53;ReadPosRankSum=1.274;VQSLOD=1.6377;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	1/1:1,2:1:3.01:44,3,0	0/0:10,0:2:2.98:0,3,22	0/0:12,0:1:3:0,3,25	1/1:1,8:2:6.02:87,6,0	./.	./.	./.	./.	1/1:1,7:4:9.03:133,9,0	./.	./.	./.	./.	./.	./.	./.	./.	./.	1/1:2,5:2:6.02:87,6,0	./.	1/1:0,5:4:9.03:131,9,0	./.	./.	./.	1/1:0,4:1:3.01:44,3,0	./.	1/1:0,6:1:3.01:44,3,0
chr10	28718066	.	C	CTTG	5711.85	PASS	AC=32;AF=0.889;AN=36;BaseQRankSum=-3.705;DP=365;FS=41.132;HRun=0;HaplotypeScore=46.6775;InbreedingCoeff=0.6464;MQ=37.30;MQ0=228;MQRankSum=-3.756;QD=21.47;ReadPosRankSum=1.610;VQSLOD=2.8158;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,14:8:12.04:264,12,0	./.	0/0:13,0:5:12.01:0,12,157	0/0:16,0:1:3.01:0,3,45	./.	./.	1/1:3,14:8:21.07:462,21,0	1/1:3,9:5:15.05:306,15,0	1/1:1,25:14:30.10:660,30,0	./.	./.	1/1:10,16:17:30.10:657,30,0	1/1:3,10:8:21.07:454,21,0	1/1:5,12:10:15.05:321,15,0	1/1:6,20:17:30.10:632,30,0	1/1:2,12:7:18.06:370,18,0	1/1:1,8:2:6.02:132,6,0	1/1:0,7:4:9.03:198,9,0	1/1:5,5:5:9.03:198,9,0	./.	1/1:3,20:3:6.02:132,6,0	./.	./.	1/1:3,13:3:6.02:132,6,0	./.	1/1:8,8:5:12.04:265,12,0	1/1:2,13:10:24.08:528,24,0	./.
chr10	28720044	.	G	GTTTGTTTA	26043.02	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-4.359;DP=547;FS=21.140;HRun=0;HaplotypeScore=91.6734;InbreedingCoeff=0.7625;MQ=58.87;MQ0=1;MQRankSum=-7.801;QD=51.88;ReadPosRankSum=5.829;VQSLOD=3.0276;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,29:35:30.10:1228,30,0	1/1:5,0:5:12.02:224,12,0	0/0:21,0:18:35.74:0,36,448	0/0:24,0:22:36.57:0,37,685	1/1:0,8:9:9.03:289,9,0	1/1:2,12:17:24.08:1046,24,0	1/1:2,25:27:30.10:1305,30,0	1/1:32,0:32:87.67:1464,88,0	1/1:1,18:20:33.11:1437,33,0	1/1:0,12:13:36.06:1076,36,0	1/1:1,4:6:5.95:145,6,0	1/1:0,19:23:33.11:1437,33,0	1/1:3,18:25:20.62:914,21,0	1/1:0,19:21:30.10:1304,30,0	1/1:1,32:39:68.81:3001,69,0	1/1:0,21:24:44.60:1960,45,0	1/1:3,18:24:24.08:1046,24,0	1/1:0,11:12:12.04:504,12,0	1/1:2,14:20:57.05:1047,57,0	1/1:7,0:7:15.01:268,15,0	1/1:3,15:21:11.92:203,12,0	1/1:6,0:5:9.03:124,9,0	1/1:1,13:17:17.87:552,18,0	1/1:2,14:22:15.43:540,15,0	1/1:1,4:5:5.97:149,6,0	1/1:2,27:31:83.97:2314,84,0	1/1:1,34:36:51.15:2203,51,0	1/1:0,5:5:6.02:261,6,0
chr10	28720047	.	T	TG	1641.29	PASS	AB=0.948;AC=35;AF=0.625;AN=56;BaseQRankSum=10.082;DP=456;FS=8.168;HRun=0;HaplotypeScore=131.4451;InbreedingCoeff=-0.0794;MQ=62.44;MQ0=1;MQRankSum=-11.146;QD=4.07;ReadPosRankSum=7.001;VQSLOD=2.1345;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:29:9.44:119,0,9	0/1:3,2:5:39.75:40,0,95	0/0:21,0:19:51.07:0,51,616	0/0:24,0:22:50.57:0,51,674	0/1:9,0:9:28.21:29,0,28	1/1:12,0:12:18.37:84,18,0	1/1:17,0:17:6.11:78,6,0	0/1:26,6:32:99:115,0,851	0/1:19,0:19:38.22:93,0,38	0/1:10,0:10:56.79:57,0,82	0/1:5,0:5:4:4,0,36	1/1:19,0:19:30.04:130,30,0	1/1:15,0:15:19.27:85,19,0	1/1:19,0:19:3.52:91,4,0	1/1:33,0:33:39.12:246,39,0	1/1:22,0:22:41.10:181,41,0	0/1:20,0:20:40.24:47,0,40	1/1:9,0:9:11.24:69,11,0	0/1:17,0:17:26.24:26,0,355	0/0:8,0:8:10.16:0,10,222	0/1:15,0:15:0.35:0,0,94	0/1:3,3:5:23.04:23,0,32	0/1:14,0:14:4.84:5,0,94	0/1:17,0:17:31.53:32,0,44	0/1:5,0:5:6.12:6,0,36	0/1:21,0:21:63.72:64,0,373	1/1:29,0:29:17.75:165,18,0	1/1:4,0:4:5.49:24,5,0
chr10	28720204	.	CTT	C	7283.06	PASS	AB=0.850;AC=52;AF=0.929;AN=56;BaseQRankSum=-2.052;DP=410;FS=4.157;HRun=13;HaplotypeScore=74.1970;InbreedingCoeff=0.3572;MQ=62.35;MQ0=0;MQRankSum=0.436;QD=18.07;ReadPosRankSum=4.487;VQSLOD=4.3501;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,16:21:29.64:323,30,0	1/1:2,2:4:6:58,6,0	0/1:9,0:8:19.24:19,0,97	0/0:7,0:4:5.91:0,6,60	1/1:8,19:27:47.02:464,47,0	1/1:3,17:20:45.06:436,45,0	1/1:0,6:6:15.02:145,15,0	1/1:8,23:30:62.55:561,63,0	1/1:0,6:6:15.02:145,15,0	1/1:4,12:16:29.98:285,30,0	1/1:4,14:19:33.13:395,33,0	1/1:2,8:10:24.01:233,24,0	1/1:6,3:9:8.95:87,9,0	1/1:3,5:8:18.03:174,18,0	1/1:1,14:15:36.05:349,36,0	1/1:2,7:10:20.12:210,20,0	1/1:4,24:28:54.05:524,54,0	1/1:3,11:14:29.99:291,30,0	1/1:9,12:22:23.91:282,24,0	1/1:9,18:27:51.99:543,52,0	1/1:2,3:5:9:87,9,0	1/1:4,6:12:14.66:178,15,0	1/1:3,14:17:39.05:378,39,0	1/1:2,7:9:14.96:145,15,0	0/1:8,6:14:1.21:152,0,1	1/1:7,10:18:15.87:282,16,0	1/1:2,14:16:39.05:378,39,0	1/1:3,6:10:17.76:157,18,0
chr10	28720478	.	C	CTAA	8124.17	PASS	AB=0.774;AC=29;AF=0.518;AN=56;BaseQRankSum=11.168;DP=565;FS=102.870;HRun=0;HaplotypeScore=166.1240;InbreedingCoeff=-0.3797;MQ=55.99;MQ0=0;MQRankSum=-9.877;QD=18.17;ReadPosRankSum=8.562;VQSLOD=0.9677;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:19,5:24:95.68:265,0,96	0/1:6,1:7:35.03:66,0,35	0/0:37,0:32:93.24:0,93,1578	0/0:26,0:25:72.13:0,72,1229	0/1:15,15:30:70.80:474,0,71	0/1:8,5:13:48.79:262,0,49	0/1:12,5:17:99:211,0,109	0/1:22,0:22:87.57:199,0,88	0/1:11,8:19:69.48:338,0,69	0/1:19,12:31:19.55:752,0,20	1/1:8,11:18:5.17:344,5,0	0/1:8,9:17:30.11:489,0,30	1/1:12,6:18:11.24:347,11,0	1/1:7,6:13:30.57:321,31,0	0/1:8,7:15:23.09:321,0,23	0/1:12,7:19:26.54:410,0,27	0/0:33,0:33:92.64:0,93,793	0/0:22,0:22:62.78:0,63,500	0/1:15,4:18:24.75:286,0,25	1/1:18,10:28:28.64:669,29,0	0/1:12,7:19:40.44:211,0,40	0/1:10,4:14:64.91:229,0,65	1/1:9,5:14:12.25:272,12,0	0/1:22,5:27:82.25:407,0,82	0/1:11,1:12:79.82:120,0,80	0/1:9,6:15:19.42:425,0,19	0/1:16,10:26:39.36:570,0,39	0/1:7,2:9:16.13:137,0,16
chr10	28720479	.	C	CT	1895.71	PASS	AB=0.761;AC=25;AF=0.446;AN=56;BaseQRankSum=12.643;DP=568;FS=111.514;HRun=0;HaplotypeScore=167.4636;InbreedingCoeff=-0.6582;MQ=56.07;MQ0=0;MQRankSum=-7.685;QD=4.27;ReadPosRankSum=12.795;VQSLOD=-0.4875;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:19,5:24:78.49:78,0,137	0/1:6,1:7:0.35:0,0,64	0/0:39,0:34:93.19:0,93,1248	0/0:28,0:26:71.26:0,71,945	0/1:14,15:29:99:123,0,103	0/1:8,5:13:13.72:110,0,14	0/1:12,5:17:32.91:33,0,126	0/1:22,0:22:15.89:16,0,93	0/1:12,8:20:45.67:95,0,46	0/1:19,12:31:77.61:209,0,78	0/1:8,11:18:55.95:68,0,56	0/1:8,9:17:23.89:172,0,24	0/1:12,6:18:67.05:83,0,67	0/1:6,6:12:23.79:68,0,24	0/1:7,7:14:34.75:92,0,35	0/1:13,7:20:28.22:120,0,28	0/0:34,0:34:89.40:0,89,473	0/0:23,0:23:56.27:0,56,276	0/1:15,4:18:30.81:72,0,31	0/1:18,10:28:59.21:170,0,59	0/1:12,7:19:23.03:23,0,136	0/1:9,4:13:67.50:67,0,68	0/1:9,5:14:36.68:37,0,74	0/1:21,5:26:59.97:60,0,135	0/1:11,1:12:24.17:24,0,108	1/1:9,6:15:2.61:133,3,0	0/1:16,10:26:63.45:176,0,63	0/1:7,2:9:22.66:23,0,42
chr10	28720480	.	A	AACTA	16860.92	PASS	AB=1.000;AC=47;AF=0.839;AN=56;BaseQRankSum=1.634;DP=572;FS=106.721;HRun=0;HaplotypeScore=149.7672;InbreedingCoeff=0.8783;MQ=55.96;MQ0=0;MQRankSum=-8.103;QD=37.98;ReadPosRankSum=2.160;VQSLOD=1.7620;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:24:44.49:670,44,0	1/1:7,0:7:14.98:221,15,0	0/0:40,0:35:60.16:0,60,826	0/0:30,0:27:37.90:0,38,525	1/1:25,3:29:54.09:1030,54,0	1/1:13,0:13:30.07:570,30,0	1/1:17,0:17:33.04:570,33,0	1/1:20,0:20:27.07:370,27,0	1/1:15,4:20:30.03:667,30,0	1/1:32,0:32:44.17:1376,44,0	1/1:19,0:18:42.06:789,42,0	1/1:17,0:17:39.12:875,39,0	1/1:18,0:18:51.08:847,51,0	1/1:13,0:13:27.08:549,27,0	1/1:14,0:14:30.08:591,30,0	1/1:20,0:20:45.13:866,45,0	0/0:34,0:34:53.03:0,53,731	0/0:24,0:24:43.90:0,44,457	1/1:19,0:18:36.05:609,36,0	1/1:27,0:27:63.20:1242,63,0	1/1:20,0:20:33.07:547,33,0	1/1:12,0:12:24.06:433,24,0	1/1:14,0:14:36.08:588,36,0	1/1:26,0:26:59.63:964,60,0	0/1:12,0:12:7.90:267,0,8	1/1:15,0:15:39.08:791,39,0	1/1:27,0:27:57.10:1105,57,0	1/1:9,0:9:21:323,21,0
chr10	28720489	.	A	ACTAA	16954.29	PASS	AB=1.000;AC=47;AF=0.839;AN=56;BaseQRankSum=1.580;DP=576;FS=102.057;HRun=0;HaplotypeScore=154.8224;InbreedingCoeff=0.8783;MQ=57.51;MQ0=0;MQRankSum=-8.112;QD=37.93;ReadPosRankSum=1.616;VQSLOD=1.6735;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:25:47.50:705,47,0	1/1:8,0:8:14.98:221,15,0	0/0:44,0:40:60.16:0,60,826	0/0:30,0:27:37.90:0,38,525	1/1:30,0:30:54.09:1030,54,0	1/1:14,0:14:27.07:532,27,0	1/1:19,0:19:39.06:679,39,0	1/1:20,0:20:27.07:370,27,0	1/1:20,0:20:30.03:667,30,0	1/1:30,0:30:44.15:1354,44,0	1/1:15,6:20:42.06:789,42,0	1/1:17,0:17:39.12:875,39,0	1/1:20,0:20:51.01:826,51,0	1/1:15,0:15:27.08:549,27,0	1/1:15,0:15:33.09:664,33,0	1/1:20,0:20:45.13:866,45,0	0/0:32,0:32:53.03:0,53,731	0/0:23,0:23:43.90:0,44,457	1/1:18,0:18:36.02:588,36,0	1/1:26,0:26:63.08:1202,63,0	1/1:18,0:18:36.01:565,36,0	1/1:12,0:12:24.06:433,24,0	1/1:15,0:15:36.08:588,36,0	1/1:25,0:25:59.63:964,60,0	0/1:10,0:10:7.90:267,0,8	1/1:16,0:16:39.08:791,39,0	1/1:25,0:25:57.10:1105,57,0	1/1:8,0:8:21:323,21,0
chr10	28720954	.	A	AT	228.03	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=1.415;DP=383;FS=1.022;HRun=10;HaplotypeScore=53.1898;InbreedingCoeff=0.7346;MQ=78.07;MQ0=0;MQRankSum=-0.764;QD=6.33;ReadPosRankSum=-1.927;VQSLOD=0.6118;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:24:58.96:0,59,474	0/0:4,0:4:11.99:0,12,98	0/0:12,0:11:14.75:0,15,111	0/1:20,0:16:10.47:10,0,115	0/0:10,0:10:17.66:0,18,147	0/0:8,0:8:17.96:0,18,148	0/0:13,0:13:32.95:0,33,271	0/0:26,0:26:71.91:0,72,591	0/0:10,0:10:23.97:0,24,197	0/0:22,0:22:56.92:0,57,468	0/0:20,0:20:50.92:0,51,417	0/0:11,0:11:23.97:0,24,197	0/0:12,0:12:23.94:0,24,197	0/0:10,0:10:25.79:0,26,202	0/0:17,0:17:44.92:0,45,366	0/0:18,0:18:35.93:0,36,296	1/1:2,5:7:18.01:180,18,0	1/1:3,6:9:15.04:160,15,0	0/0:26,0:26:15.96:0,16,336	0/0:4,0:4:11.99:0,12,99	0/0:9,0:9:20.97:0,21,172	0/0:8,0:8:14.96:0,15,123	0/0:13,0:13:29.08:0,29,243	0/0:10,0:10:23.95:0,24,194	0/0:7,0:7:20.98:0,21,172	0/0:18,0:18:41.92:0,42,345	0/0:23,0:23:59.67:0,60,489	0/0:12,0:12:29.94:0,30,243
chr10	28721001	.	CCCCCG	C	1978.89	PASS	AB=0.854;AC=41;AF=0.732;AN=56;BaseQRankSum=0.641;DP=199;FS=35.900;HRun=0;HaplotypeScore=46.9432;InbreedingCoeff=0.1233;MQ=68.12;MQ0=1;MQRankSum=-0.615;QD=11.99;ReadPosRankSum=2.566;VQSLOD=0.5644;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:5,2:7:19.86:68,0,20	1/1:0,3:3:2.96:19,3,0	0/0:16,0:10:12.46:0,12,137	0/1:14,0:8:14.98:15,0,66	1/1:3,8:11:5.05:72,5,0	0/1:5,0:5:15.55:18,0,16	1/1:10,1:11:16.72:184,17,0	1/1:3,7:10:11.61:113,12,0	1/1:1,3:4:4.41:110,4,0	1/1:3,4:7:12.06:195,12,0	0/0:5,0:5:2.04:0,2,11	0/1:4,1:5:22.53:66,0,23	1/1:2,3:5:8.99:165,9,0	0/1:10,1:11:51.40:51,0,68	1/1:6,1:7:12.48:142,12,0	1/1:3,4:7:8.92:132,9,0	0/0:9,0:9:18.80:0,19,251	0/0:4,0:3:9.01:0,9,169	0/1:3,2:6:24.11:77,0,24	1/1:5,1:5:2.97:20,3,0	1/1:4,0:4:5.94:58,6,0	1/1:3,3:6:2.89:56,3,0	1/1:2,4:6:2.95:56,3,0	1/1:6,3:9:4.80:66,5,0	0/1:4,3:7:1.86:203,0,2	1/1:1,2:3:5.96:79,6,0	1/1:3,5:8:8.58:132,9,0	1/1:3,0:3:1.09:37,1,0
chr10	28721003	.	CCCGCT	C	1451.86	PASS	AB=1.000;AC=46;AF=0.821;AN=56;BaseQRankSum=-0.705;DP=184;FS=2.599;HRun=0;HaplotypeScore=47.1230;InbreedingCoeff=0.3615;MQ=66.45;MQ0=1;MQRankSum=-1.592;QD=9.37;ReadPosRankSum=1.227;VQSLOD=1.6403;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:5,0:5:3.48:36,3,0	0/1:3,0:3:0:0,0,0	0/0:16,0:10:7.63:0,8,77	0/1:13,0:8:3.52:4,0,79	1/1:9,1:10:5.21:64,5,0	1/1:3,2:5:3.37:17,3,0	1/1:8,1:9:15.08:147,15,0	1/1:10,0:10:14.27:102,14,0	1/1:4,0:4:8.99:100,9,0	1/1:5,1:6:10.80:145,11,0	0/1:4,0:4:0.02:0,0,0	1/1:6,0:6:6.45:60,6,0	0/1:7,0:7:11.28:103,0,11	1/1:10,0:10:11.98:102,12,0	1/1:5,1:6:15.71:118,16,0	1/1:5,0:5:8.86:90,9,0	0/0:9,0:9:14.58:0,15,217	0/0:4,0:3:5.97:0,6,116	1/1:5,0:5:2.96:35,3,0	1/1:6,0:5:0.94:3,1,0	1/1:4,0:4:3:25,3,0	1/1:4,0:4:3.01:38,3,0	1/1:4,0:4:3.01:40,3,0	1/1:9,0:9:6.05:63,6,0	1/1:7,0:7:10.38:122,10,0	1/1:2,0:2:2.53:36,3,0	1/1:7,0:7:6.24:82,6,0	1/1:3,0:3:5.97:59,6,0
chr10	28721005	.	CGCT	C	807.28	PASS	AB=0.958;AC=44;AF=0.815;AN=54;BaseQRankSum=0.933;DP=168;FS=3.855;HRun=0;HaplotypeScore=40.9175;InbreedingCoeff=0.2917;MQ=60.11;MQ0=1;MQRankSum=-1.757;QD=5.49;ReadPosRankSum=1.019;VQSLOD=1.4537;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:5,0:5:3.22:13,3,0	0/1:3,0:3:0:0,0,0	0/1:11,0:7:10.29:10,0,111	0/1:8,0:6:0.29:0,0,86	1/1:10,0:10:5.78:42,6,0	1/1:4,0:4:3.37:17,3,0	1/1:7,1:8:15.09:106,15,0	1/1:10,0:10:14:79,14,0	1/1:4,0:4:8.78:52,9,0	1/1:6,0:6:10.61:74,11,0	./.	1/1:5,0:5:6.31:36,6,0	0/1:7,0:7:11.46:37,0,11	1/1:8,0:8:11.47:79,11,0	1/1:6,0:6:15.58:95,16,0	1/1:5,0:5:8.56:43,9,0	0/0:9,1:10:18.28:0,18,228	0/0:3,0:2:4.83:0,5,65	1/1:3,0:3:2.68:11,3,0	0/0:6,0:5:0.07:0,0,1	1/1:3,0:3:2.80:13,3,0	1/1:4,0:4:2.88:15,3,0	1/1:4,0:4:2.90:16,3,0	1/1:9,0:10:4.70:37,5,0	1/1:8,0:8:10.14:52,10,0	1/1:2,0:2:2.46:12,2,0	1/1:7,0:7:6.22:35,6,0	1/1:1,2:3:6.85:61,7,0
chr10	28723897	.	T	TA	15351.95	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-1.037;DP=453;FS=26.341;HRun=4;HaplotypeScore=77.6617;InbreedingCoeff=0.9724;MQ=70.01;MQ0=1;MQRankSum=-6.180;QD=35.79;ReadPosRankSum=4.790;VQSLOD=2.8569;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,23:27:61.47:860,61,0	1/1:0,5:5:12.04:168,12,0	0/0:14,0:13:27.07:0,27,311	0/0:10,0:9:18.05:0,18,215	1/1:1,14:15:42.14:587,42,0	1/1:1,17:18:48.16:671,48,0	1/1:1,16:17:48.16:672,48,0	1/1:3,25:28:75.22:1006,75,0	1/1:1,10:11:30.10:412,30,0	1/1:4,24:28:78.26:1075,78,0	1/1:1,21:22:60.11:795,60,0	1/1:1,11:12:30.10:419,30,0	1/1:2,9:11:27.09:377,27,0	1/1:1,12:13:30.10:419,30,0	1/1:3,16:19:45.13:629,45,0	1/1:0,18:18:51.17:713,51,0	1/1:1,20:21:57.19:795,57,0	1/1:3,12:15:29.76:419,30,0	1/1:5,14:19:54.13:705,54,0	1/1:1,15:16:45.15:626,45,0	1/1:3,11:14:33.11:462,33,0	1/1:2,5:7:18.06:251,18,0	1/1:3,9:12:27.09:363,27,0	1/1:0,16:16:39.13:536,39,0	1/1:0,17:17:48.16:671,48,0	1/1:2,15:15:39.13:545,39,0	1/1:1,21:22:60.20:839,60,0	1/1:1,8:9:24.08:336,24,0
chr10	28724330	.	AAGAG	A	14981.56	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=0.935;DP=632;FS=6.614;HRun=0;HaplotypeScore=126.2707;InbreedingCoeff=0.8759;MQ=69.80;MQ0=7;MQRankSum=-5.185;QD=27.80;ReadPosRankSum=5.350;VQSLOD=3.9505;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,37:44:51.17:870,51,0	1/1:2,4:6:3.01:51,3,0	0/0:41,0:29:59.82:0,60,1122	0/0:49,0:31:46.72:0,47,747	1/1:6,19:25:39.09:632,39,0	1/1:4,13:17:27.09:460,27,0	1/1:7,22:29:45.15:767,45,0	1/1:8,16:24:43.03:674,43,0	1/1:0,18:18:39.13:665,39,0	1/1:10,17:27:45.12:713,45,0	1/1:3,23:26:54.18:893,54,0	1/1:1,15:16:33.11:563,33,0	1/1:7,17:22:42.14:716,42,0	1/1:6,11:17:21.07:335,21,0	1/1:1,17:19:51.17:847,51,0	1/1:5,12:17:18.06:307,18,0	1/1:5,19:24:39.13:665,39,0	1/1:3,21:23:51.17:870,51,0	1/1:3,8:11:24.04:310,24,0	1/1:4,14:18:33.03:499,33,0	1/1:4,10:14:15.05:256,15,0	1/1:2,9:11:15.01:225,15,0	1/1:6,12:18:30.02:449,30,0	1/1:7,36:42:78.27:1330,78,0	1/1:7,11:18:15.05:256,15,0	1/1:6,18:23:48.16:806,48,0	1/1:4,15:21:39.12:619,39,0	1/1:0,4:4:12.04:205,12,0
chr10	28724393	.	GCAA	G	65.97	PASS	AB=0.846;AC=6;AF=0.107;AN=56;BaseQRankSum=7.114;DP=449;FS=20.531;HRun=0;HaplotypeScore=146.1805;InbreedingCoeff=0.1420;MQ=66.90;MQ0=1;MQRankSum=-2.636;QD=0.93;ReadPosRankSum=-2.949;VQSLOD=0.8238;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:63.22:0,63,1545	1/1:2,0:2:2.97:20,3,0	0/0:24,0:19:51.17:0,51,1188	0/0:30,0:26:35.40:0,35,981	0/0:19,2:21:13.44:0,13,1088	0/0:12,0:12:30.09:0,30,670	0/0:18,0:18:48.16:0,48,1177	0/0:9,0:9:24.08:0,24,591	0/0:22,0:22:57.20:0,57,1377	0/1:17,2:19:23.91:24,0,1012	0/0:14,1:16:33.06:0,33,720	0/0:11,0:11:27.09:0,27,664	0/0:17,0:17:39.13:0,39,957	0/0:13,0:13:19.22:0,19,646	0/0:15,0:15:42.14:0,42,1021	0/0:9,0:9:21.07:0,21,471	0/0:15,0:15:36.12:0,36,884	0/0:14,0:14:39.13:0,39,961	0/0:13,0:13:25.34:0,25,802	0/0:15,0:15:39.13:0,39,959	0/0:6,0:6:18.06:0,18,424	0/0:16,1:17:31.88:0,32,915	0/1:11,4:15:26.81:27,0,666	0/0:25,0:25:60.21:0,60,1410	0/1:10,2:14:64.63:65,0,414	0/1:19,1:21:50.06:50,0,1182	0/0:17,0:17:45.14:0,45,1043	0/0:8,0:8:24.08:0,24,591
chr10	28724837	.	A	AG	438.47	PASS	AB=0.886;AC=13;AF=0.433;AN=30;BaseQRankSum=2.471;DP=84;FS=10.414;HRun=1;HaplotypeScore=68.4129;InbreedingCoeff=-0.0589;MQ=25.11;MQ0=4;MQRankSum=-0.170;QD=8.77;ReadPosRankSum=0.536;VQSLOD=-0.0474;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:3,0:3:5.51:0,6,50	./.	./.	0/0:9,0:2:3.01:0,3,42	1/1:4,0:4:2.84:14,3,0	./.	./.	./.	1/1:1,0:1:2.94:18,3,0	0/1:8,3:11:39.83:196,0,40	./.	0/1:2,0:1:0:0,0,0	./.	0/1:3,0:2:0.42:0,0,1	./.	0/0:2,0:2:3.01:0,3,42	./.	./.	./.	0/1:2,2:4:36.95:56,0,37	./.	0/1:6,3:9:28.08:48,0,28	0/1:3,0:3:23.36:87,0,23	./.	1/1:3,0:3:8.82:87,9,0	0/0:5,0:5:7.49:0,7,62	0/0:1,0:1:2.92:0,3,17	0/1:10,0:10:37.13:37,0,139
chr10	28724857	.	G	GGA	783.12	PASS	AB=0.868;AC=17;AF=0.327;AN=52;BaseQRankSum=-0.837;DP=240;FS=3.405;HRun=0;HaplotypeScore=136.7626;InbreedingCoeff=-0.1379;MQ=25.08;MQ0=17;MQRankSum=0.795;QD=4.99;ReadPosRankSum=-4.067;VQSLOD=2.1550;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:10,3:13:35.87:36,0,173	0/0:2,0:2:5.38:0,5,52	0/0:16,0:4:12.04:0,12,173	0/0:25,0:4:9.03:0,9,129	0/1:9,0:9:9.37:9,0,39	0/1:6,1:6:23.73:69,0,24	0/0:3,0:3:3:0,3,29	1/1:5,2:5:9.03:151,9,0	0/0:3,0:2:0.89:0,1,2	0/1:23,3:26:99:142,0,541	0/1:5,1:5:46.18:46,0,68	0/1:1,1:2:36.05:50,0,36	0/0:2,0:1:3.01:0,3,44	0/1:5,1:4:41.53:49,0,42	./.	0/0:3,0:3:7.83:0,8,66	0/0:2,0:2:2.60:0,3,10	./.	0/0:4,0:4:0.69:0,1,28	0/0:7,0:7:21.06:0,21,278	1/1:6,0:5:2.88:15,3,0	0/1:21,2:23:76.63:77,0,384	0/1:6,2:8:88.53:89,0,152	1/1:2,1:3:4.83:61,5,0	0/0:9,0:8:17.29:0,17,189	0/1:21,4:25:99:133,0,323	0/0:3,0:3:9:0,9,107	0/1:16,0:16:2.73:3,0,332
chr10	28724877	.	AGGAGAAGGG	A	2308.70	PASS	AB=0.919;AC=19;AF=0.352;AN=54;BaseQRankSum=3.447;DP=297;FS=34.682;HRun=0;HaplotypeScore=177.2977;InbreedingCoeff=-0.3366;MQ=28.59;MQ0=29;MQRankSum=-1.340;QD=11.90;ReadPosRankSum=5.011;VQSLOD=1.3440;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:16,0:16:86.81:87,0,217	0/1:3,0:3:28.40:28,0,53	0/0:27,0:4:12.04:0,12,287	0/0:38,0:7:18.01:0,18,365	0/1:10,0:10:50.33:123,0,50	0/1:9,0:8:91.16:91,0,137	0/0:4,0:3:3.01:0,3,39	0/0:9,0:6:11.53:0,12,192	0/0:3,0:2:3:0,3,26	0/1:24,3:31:99:301,0,615	0/1:5,0:4:21.41:21,0,61	0/1:4,0:3:13.10:13,0,50	1/1:4,0:3:4.25:31,4,0	0/0:5,0:4:9.24:0,9,96	0/0:4,0:2:3:0,3,37	0/1:3,0:3:0.15:0,0,37	0/0:2,0:2:5.85:0,6,98	./.	0/0:7,0:7:11.84:0,12,259	1/1:6,1:9:5.25:274,5,0	0/1:6,0:6:12.17:12,0,34	0/1:18,1:22:99:260,0,119	0/1:10,0:10:95.06:96,0,95	0/0:3,0:3:2.98:0,3,22	0/1:8,1:9:33.01:277,0,33	0/1:25,3:29:99:411,0,439	0/1:2,0:3:30.31:46,0,30	0/1:16,3:19:99:386,0,133
chr10	28724879	.	G	GA	151.99	PASS	AB=0.827;AC=10;AF=0.185;AN=54;BaseQRankSum=0.750;DP=301;FS=4.303;HRun=1;HaplotypeScore=155.2526;InbreedingCoeff=-0.2646;MQ=28.42;MQ0=34;MQRankSum=1.629;QD=1.23;ReadPosRankSum=2.211;VQSLOD=-0.7203;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:11,4:16:42.23:42,0,229	0/1:2,1:3:31.57:36,0,32	0/0:31,0:5:15.05:0,15,193	0/0:36,0:7:20.89:0,21,231	0/0:10,0:10:21.53:0,22,135	0/0:8,1:8:22.27:0,22,226	0/0:4,0:3:3.01:0,3,39	0/0:9,0:6:12.04:0,12,154	0/0:2,1:2:2.90:0,3,16	0/0:30,1:31:42.68:0,43,752	0/1:4,1:4:28.45:28,0,78	0/0:4,0:3:9.03:0,9,102	0/1:0,3:3:12.04:31,0,12	0/0:5,0:4:11.82:0,12,117	0/0:4,0:2:2.96:0,3,38	0/0:4,0:3:8.99:0,9,87	0/0:2,0:2:6.02:0,6,72	./.	0/1:6,1:7:19.49:19,0,178	0/1:8,1:9:19.54:20,0,95	0/0:6,0:6:5.91:0,6,55	0/1:20,2:22:22.63:23,0,351	0/0:10,0:10:25.10:0,25,213	0/0:3,0:3:3.01:0,3,39	0/1:7,3:9:59.29:59,0,87	0/1:26,3:29:26.12:26,0,362	0/0:3,0:3:8.06:0,8,78	0/1:18,1:19:0.18:0,0,252
chr10	28724883	.	AGGGG	A	537.05	PASS	AB=0.841;AC=13;AF=0.241;AN=54;BaseQRankSum=2.271;DP=288;FS=11.259;HRun=5;HaplotypeScore=161.5928;InbreedingCoeff=-0.3205;MQ=28.72;MQ0=31;MQRankSum=3.238;QD=3.29;ReadPosRankSum=4.392;VQSLOD=-0.4434;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:11,4:16:99:101,0,304	0/1:1,1:2:47.06:50,0,47	0/0:28,0:5:15.05:0,15,388	0/0:34,0:6:17.86:0,18,294	0/0:9,0:10:16.19:0,16,224	0/0:7,1:8:15.03:0,15,286	0/0:4,0:3:3.01:0,3,41	0/0:8,0:5:12.04:0,12,294	0/0:2,1:2:3.01:0,3,48	0/1:29,1:31:7.36:7,0,908	0/1:4,1:4:46.74:47,0,55	0/0:3,0:3:8.92:0,9,75	0/1:1,3:3:2.11:45,0,2	0/0:5,0:4:8.86:0,9,134	0/0:4,0:2:3.01:0,3,75	0/0:4,0:3:8.94:0,9,82	0/0:2,0:2:6.02:0,6,112	./.	0/1:7,0:7:14.50:14,0,264	0/1:8,1:9:42.94:43,0,93	0/0:4,0:6:5.05:0,5,48	0/1:17,2:20:58.37:58,0,368	0/1:8,0:10:29.98:30,0,192	0/0:3,0:3:3.01:0,3,69	0/1:6,3:8:99:99,0,176	0/1:26,3:29:99:112,0,646	0/1:3,0:3:8.15:8,0,12	0/1:16,1:18:62.66:63,0,408
chr10	28724892	.	AG	A	153.14	PASS	AB=0.909;AC=8;AF=0.148;AN=54;BaseQRankSum=0.661;DP=293;FS=2.196;HRun=2;HaplotypeScore=155.0231;InbreedingCoeff=-0.2547;MQ=28.46;MQ0=37;MQRankSum=2.402;QD=1.47;ReadPosRankSum=1.619;VQSLOD=-0.5159;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:15,1:16:79.56:80,0,232	0/0:2,0:2:5.99:0,6,63	0/0:32,2:7:15.01:0,15,194	0/0:33,0:4:8.94:0,9,107	0/1:8,1:9:51.55:52,0,168	0/1:8,1:8:17.94:18,0,219	0/0:4,0:3:3:0,3,29	0/0:7,1:5:11.86:0,12,79	0/0:3,0:2:2.97:0,3,20	0/0:33,0:32:47:0,47,919	0/0:5,0:4:7.21:0,7,57	0/0:4,0:3:3.01:0,3,39	0/0:4,0:3:3.43:0,3,20	0/0:6,0:5:11.67:0,12,105	0/0:3,1:2:6:0,6,61	0/0:3,0:2:5.99:0,6,65	0/0:2,0:2:6.02:0,6,75	./.	0/1:6,3:9:51.33:51,0,158	0/0:9,0:9:24.04:0,24,295	0/1:6,0:6:20.72:29,0,21	0/0:19,0:19:22.29:0,22,438	0/1:8,1:9:22.60:23,0,180	0/0:3,0:3:3.01:0,3,40	0/0:10,0:9:24.01:0,24,294	0/1:25,2:27:14.61:15,0,629	0/0:3,0:3:3.42:0,3,38	0/1:18,1:19:13.26:13,0,430
chr10	28724903	.	GA	G	227.47	PASS	AB=0.809;AC=16;AF=0.308;AN=52;BaseQRankSum=-0.291;DP=258;FS=4.706;HRun=2;HaplotypeScore=153.8684;InbreedingCoeff=-0.1199;MQ=28.99;MQ0=37;MQRankSum=-1.334;QD=1.85;ReadPosRankSum=0.132;VQSLOD=-0.5846;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:11,4:15:6.68:7,0,162	0/0:2,0:2:4.82:0,5,31	0/0:28,1:3:9.03:0,9,135	0/0:24,1:3:9.03:0,9,123	0/0:7,2:9:9.11:0,9,146	0/1:6,2:7:39.95:44,0,40	1/1:2,2:2:2.74:12,3,0	0/1:3,2:3:13.95:33,0,14	./.	0/0:27,2:28:7.18:0,7,317	0/1:4,0:3:18.41:18,0,36	0/0:3,0:2:2.99:0,3,24	0/0:3,0:2:2.98:0,3,21	0/0:3,1:3:5.22:0,5,35	0/1:4,1:3:23.17:23,0,33	0/0:3,0:2:2.98:0,3,22	0/0:1,0:1:3.01:0,3,41	./.	0/0:6,0:6:4.26:0,4,122	0/0:10,0:10:9.73:0,10,257	0/1:3,3:6:0.07:8,0,0	0/1:15,4:19:77.55:78,0,234	0/1:6,2:8:37.13:37,0,134	1/1:2,0:2:2.88:15,3,0	0/0:10,0:9:1.88:0,2,152	0/1:22,5:27:10.99:11,0,333	1/1:1,1:2:3.01:36,3,0	0/1:14,4:18:43.85:44,0,314
chr10	28724915	.	G	GA	997.30	PASS	AB=0.783;AC=16;AF=0.333;AN=48;BaseQRankSum=-2.476;DP=222;FS=7.616;HRun=1;HaplotypeScore=143.7414;InbreedingCoeff=-0.2061;MQ=29.71;MQ0=26;MQRankSum=-0.298;QD=7.79;ReadPosRankSum=1.412;VQSLOD=0.7381;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:14:35.02:0,35,343	0/1:1,1:2:29.43:35,0,29	0/0:25,1:6:18:0,18,205	0/0:26,0:5:15.05:0,15,186	0/1:4,4:9:60.77:61,0,140	0/1:5,3:7:74.74:98,0,75	0/0:2,0:1:3.01:0,3,33	0/0:3,0:2:3.01:0,3,36	./.	0/1:15,8:22:99:259,0,215	1/1:2,2:4:0.96:105,1,0	1/1:0,0:1:3:27,3,0	0/0:3,0:2:3.01:0,3,38	0/0:1,0:2:5.75:0,6,50	0/0:4,0:2:3.01:0,3,39	1/1:1,1:1:3:27,3,0	0/0:1,0:1:3.01:0,3,35	./.	0/1:5,1:6:36.28:80,0,36	0/1:7,1:8:21.48:21,0,173	0/0:3,0:4:6.49:0,6,70	0/1:11,4:16:99:110,0,142	0/0:4,0:6:13.43:0,13,111	./.	0/1:8,3:10:76.24:76,0,85	0/1:16,6:25:99:204,0,285	./.	0/1:9,2:12:31.35:31,0,280
chr10	28724919	.	AGGGG	A	1278.48	PASS	AB=0.756;AC=17;AF=0.354;AN=48;BaseQRankSum=-0.895;DP=218;FS=10.592;HRun=5;HaplotypeScore=144.1512;InbreedingCoeff=-0.2481;MQ=29.91;MQ0=28;MQRankSum=1.454;QD=10.23;ReadPosRankSum=2.788;VQSLOD=-0.3589;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:14:3.13:0,3,278	1/1:0,1:2:4.26:58,4,0	0/0:28,0:7:18.05:0,18,384	0/0:25,0:7:9.03:0,9,225	0/1:6,3:9:56.37:56,0,143	0/1:4,3:7:99:137,0,153	0/0:3,0:1:2.98:0,3,21	0/0:4,0:2:3.01:0,3,84	./.	0/1:12,8:19:99:373,0,265	0/1:1,2:4:7.73:68,0,8	1/1:0,1:1:3.01:34,3,0	0/0:3,0:2:2.96:0,3,19	0/0:1,0:2:2.15:0,2,23	0/0:4,0:2:3.01:0,3,57	1/1:0,1:1:3.01:38,3,0	0/0:1,0:1:3.01:0,3,40	./.	0/1:4,1:5:48.38:48,0,77	0/1:7,1:8:58.24:58,0,305	0/1:6,0:5:2.46:2,0,36	0/1:9,4:16:99:163,0,199	0/0:6,0:6:3.35:0,3,22	./.	0/1:4,3:9:98.42:98,0,135	0/1:14,5:22:99:233,0,316	./.	0/1:10,1:12:45.08:45,0,418
chr10	28724954	.	GGAA	G	663.88	PASS	AC=30;AF=0.789;AN=38;BaseQRankSum=5.330;DP=86;FS=68.031;HRun=0;HaplotypeScore=47.1067;InbreedingCoeff=0.4164;MQ=59.74;MQ0=5;MQRankSum=1.155;QD=23.71;ReadPosRankSum=2.767;VQSLOD=0.6069;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,2:2:6.02:96,6,0	./.	0/0:29,0:12:30.05:0,30,603	0/0:27,0:14:38.15:0,38,796	1/1:3,1:4:5.75:46,6,0	1/1:0,1:1:3.01:51,3,0	./.	0/0:1,0:1:3.01:0,3,35	1/1:1,0:1:2.96:19,3,0	1/1:4,1:5:14.99:166,15,0	1/1:0,1:1:3.01:33,3,0	./.	1/1:1,0:1:1.55:4,2,0	0/0:1,0:1:3.01:0,3,38	./.	1/1:1,0:1:2.94:18,3,0	./.	./.	1/1:0,1:1:3.01:55,3,0	1/1:2,1:3:5.89:58,6,0	1/1:2,1:2:5.23:60,5,0	1/1:0,1:1:3.01:44,3,0	./.	./.	1/1:1,1:2:5.93:68,6,0	1/1:1,0:1:2.94:18,3,0	./.	1/1:0,1:1:3.01:50,3,0
chr10	28724964	.	A	AG	406.01	PASS	AB=1.000;AC=28;AF=0.667;AN=42;BaseQRankSum=4.176;DP=87;FS=35.254;HRun=2;HaplotypeScore=41.1826;InbreedingCoeff=0.3958;MQ=59.85;MQ0=6;MQRankSum=-0.183;QD=12.30;ReadPosRankSum=1.668;VQSLOD=0.2494;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,1:2:3.48:43,3,0	./.	0/0:20,0:9:20.24:0,20,210	0/0:25,0:13:28.26:0,28,313	1/1:4,0:5:5.75:45,6,0	1/1:2,1:2:5.69:51,6,0	./.	0/1:1,0:1:0:0,0,0	0/0:1,0:1:2.98:0,3,22	1/1:3,1:4:4.05:62,4,0	1/1:0,1:1:2.92:17,3,0	./.	1/1:1,0:1:2.90:16,3,0	0/0:1,0:1:3:0,3,29	0/0:1,0:1:2.68:0,3,11	0/1:2,0:2:4.18:5,0,4	./.	0/0:1,0:1:1.25:0,1,3	1/1:2,0:1:2.74:12,3,0	1/1:1,1:2:3.01:33,3,0	1/1:1,1:2:6.02:67,6,0	1/1:2,1:4:7.26:69,7,0	1/1:1,0:1:3.01:36,3,0	./.	1/1:1,1:2:3.01:40,3,0	./.	./.	1/1:0,1:1:3.01:39,3,0
chr10	28724969	.	G	GAAGA	812.19	PASS	AB=1.000;AC=37;AF=0.804;AN=46;BaseQRankSum=2.931;DP=94;FS=37.350;HRun=0;HaplotypeScore=42.3933;InbreedingCoeff=0.3453;MQ=63.34;MQ0=8;MQRankSum=-0.614;QD=18.05;ReadPosRankSum=1.332;VQSLOD=1.6044;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,0:2:6.01:88,6,0	./.	0/0:20,0:9:19.78:0,20,237	0/0:23,0:11:19.62:0,20,343	1/1:1,3:4:3.01:53,3,0	1/1:3,0:3:6.02:106,6,0	1/1:2,0:1:2.94:18,3,0	0/0:3,0:2:2.96:0,3,19	1/1:1,0:1:2.88:15,3,0	0/1:4,0:4:2.71:40,0,3	1/1:1,0:1:0.47:1,0,0	./.	1/1:1,0:1:1.82:5,2,0	1/1:0,0:1:2.97:20,3,0	0/0:1,0:1:2.68:0,3,11	1/1:1,2:3:5.85:101,6,0	./.	1/1:0,2:2:3.01:87,3,0	1/1:4,0:1:1.25:3,1,0	1/1:2,0:2:2.98:22,3,0	1/1:3,0:3:6.01:60,6,0	1/1:2,2:4:8.96:158,9,0	1/1:1,0:1:3.01:53,3,0	./.	1/1:2,1:3:5.95:58,6,0	1/1:1,0:1:2.97:20,3,0	./.	1/1:1,0:1:3.01:30,3,0
chr10	28725326	.	A	AG	2271.83	PASS	AB=0.855;AC=34;AF=0.607;AN=56;BaseQRankSum=-4.843;DP=490;FS=2.285;HRun=0;HaplotypeScore=82.3459;InbreedingCoeff=-0.1526;MQ=55.24;MQ0=52;MQRankSum=0.682;QD=5.77;ReadPosRankSum=3.321;VQSLOD=3.5772;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:14,12:24:17.66:264,0,18	1/1:3,2:4:10.25:84,10,0	0/0:42,0:9:7.21:0,7,40	0/0:46,0:17:28.94:0,29,164	0/1:17,4:17:6.42:130,0,6	1/1:8,3:6:5.45:93,5,0	0/1:13,2:14:3.89:107,0,4	0/1:16,6:21:94.13:104,0,94	1/1:10,7:12:11.12:166,11,0	0/1:15,6:19:38.24:179,0,38	1/1:9,2:8:11.10:78,11,0	0/1:9,3:11:14.84:88,0,15	0/1:12,3:13:12.02:101,0,12	0/1:10,4:14:14.07:95,0,14	0/1:11,2:13:1.30:133,0,1	1/1:9,3:9:14.55:106,15,0	0/1:30,0:27:1.58:2,0,130	0/1:24,0:22:20.86:21,0,123	0/1:18,1:15:7.80:97,0,8	1/1:6,0:5:13.42:72,13,0	0/0:7,0:4:1.57:0,2,27	1/1:5,2:6:11.20:78,11,0	0/1:10,2:11:30.70:31,0,43	0/1:10,1:10:1.55:2,0,28	1/1:16,2:17:8.05:90,8,0	0/1:25,4:25:35.66:148,0,36	0/1:12,3:12:35.66:63,0,36	1/1:4,3:6:10.55:102,11,0
chr10	28725330	.	A	AG	3584.36	PASS	AB=0.984;AC=48;AF=0.857;AN=56;BaseQRankSum=-0.817;DP=490;FS=11.957;HRun=0;HaplotypeScore=80.9935;InbreedingCoeff=0.3033;MQ=50.74;MQ0=56;MQRankSum=-0.725;QD=8.94;ReadPosRankSum=-0.856;VQSLOD=2.7999;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:25,1:24:46.69:357,47,0	1/1:5,0:4:8.81:70,9,0	0/0:43,0:7:2.82:0,3,27	0/0:46,0:17:26.56:0,27,151	1/1:19,1:16:10.01:183,10,0	1/1:10,1:6:13.80:121,14,0	1/1:15,1:14:19.12:134,19,0	1/1:23,0:22:0.35:206,0,0	1/1:19,0:13:24.75:160,25,0	1/1:21,0:19:27.01:228,27,0	1/1:11,0:8:14.49:90,14,0	1/1:12,0:11:9.20:119,9,0	1/1:12,0:10:14.62:119,15,0	1/1:12,1:13:24.33:173,24,0	1/1:13,0:13:5.79:106,6,0	1/1:11,0:8:21.48:145,21,0	1/1:30,0:27:13.25:99,13,0	0/1:24,0:22:27.71:88,0,28	1/1:16,0:12:11.94:137,12,0	1/1:5,0:4:11.67:74,12,0	0/1:6,0:3:6.76:7,0,14	1/1:7,0:6:11.80:93,12,0	1/1:4,3:10:22.29:128,22,0	0/1:11,0:10:13.15:19,0,13	1/1:19,0:17:21.82:128,22,0	1/1:33,0:29:54.99:311,55,0	0/1:14,1:12:4.06:152,0,4	1/1:10,0:7:17.82:138,18,0
chr10	28725336	.	A	AAG	3992.14	PASS	AB=0.866;AC=26;AF=0.464;AN=56;BaseQRankSum=-1.896;DP=504;FS=130.044;HRun=0;HaplotypeScore=92.3534;InbreedingCoeff=-0.8318;MQ=55.78;MQ0=55;MQRankSum=-7.276;QD=8.89;ReadPosRankSum=-0.348;VQSLOD=-0.2525;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:20,8:25:99:252,0,174	0/1:4,1:4:30.95:43,0,31	0/0:43,0:10:2.75:0,3,40	0/1:43,0:15:3.46:3,0,166	0/1:19,3:18:99:189,0,157	0/0:11,0:6:17.69:0,18,160	0/1:14,2:13:67.18:167,0,67	0/1:22,4:25:99:181,0,112	0/1:17,3:14:99:182,0,152	0/1:23,3:22:99:191,0,242	0/1:11,2:10:29.88:107,0,30	0/1:11,2:12:85.32:85,0,101	0/1:9,3:10:42.87:84,0,43	0/1:10,3:13:99:141,0,106	0/1:12,2:14:99:218,0,205	0/1:11,1:9:59.68:60,0,138	0/1:18,11:27:99:339,0,243	0/1:20,2:20:99:312,0,204	0/1:18,2:14:85.95:86,0,151	0/1:4,0:3:0.32:0,0,56	0/1:6,0:3:8.58:9,0,48	0/1:6,1:6:38.09:38,0,95	0/1:9,2:10:77.40:77,0,80	0/1:10,2:11:77.45:86,0,77	0/1:11,7:17:18.90:281,0,19	0/1:19,14:29:99:593,0,118	0/1:11,3:11:99:155,0,124	0/1:9,0:6:65.61:110,0,66
chr10	28725340	.	GAAAAA	G	4528.58	PASS	AB=0.965;AC=46;AF=0.821;AN=56;BaseQRankSum=-2.524;DP=505;FS=0.000;HRun=17;HaplotypeScore=102.0578;InbreedingCoeff=0.2795;MQ=58.36;MQ0=54;MQRankSum=-2.965;QD=11.13;ReadPosRankSum=3.084;VQSLOD=0.6530;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:27,1:25:23.31:286,23,0	1/1:5,0:4:5.36:52,5,0	0/0:41,0:9:9.37:0,9,39	0/0:45,0:15:25.37:0,25,228	1/1:20,1:17:18.27:232,18,0	0/0:10,0:5:0.47:0,0,2	0/1:16,0:13:5.35:140,0,5	1/1:16,8:23:36.89:340,37,0	1/1:17,0:11:16.61:215,17,0	1/1:19,7:22:4.35:232,4,0	1/1:9,4:10:13.65:102,14,0	0/1:13,0:13:12.23:55,0,12	1/1:12,0:11:11.40:104,11,0	1/1:13,1:14:20.71:256,21,0	1/1:13,0:13:16.30:201,16,0	0/1:12,1:10:9.61:142,0,10	1/1:25,0:24:12.17:131,12,0	1/1:23,0:24:4.56:147,5,0	1/1:21,0:15:8.10:194,8,0	1/1:5,0:4:4.97:40,5,0	1/1:7,0:4:5.83:63,6,0	1/1:7,0:6:8.84:112,9,0	1/1:9,0:9:1.59:40,2,0	0/1:13,0:12:16.10:64,0,16	1/1:17,1:17:24.02:348,24,0	1/1:25,7:28:56.40:759,56,0	1/1:14,1:12:13.38:163,13,0	1/1:10,0:7:8.86:109,9,0
chr10	28725345	.	A	AG	2290.94	PASS	AB=0.772;AC=25;AF=0.446;AN=56;BaseQRankSum=0.768;DP=509;FS=41.743;HRun=0;HaplotypeScore=86.3390;InbreedingCoeff=-0.5482;MQ=60.78;MQ0=51;MQRankSum=-3.885;QD=6.49;ReadPosRankSum=6.098;VQSLOD=1.1540;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:20,6:23:92.90:94,0,93	1/1:3,1:4:5.31:40,5,0	0/0:46,0:10:8.79:0,9,53	0/0:47,0:15:18.59:0,19,190	0/1:16,8:20:99:137,0,135	0/0:6,4:5:8.90:0,9,68	0/1:5,9:11:66.29:107,0,66	0/1:17,3:19:50.56:223,0,51	0/1:8,7:9:65.71:118,0,66	0/1:21,6:23:99:100,0,235	0/1:9,1:9:37.87:62,0,38	0/1:11,1:11:10.65:11,0,110	0/1:7,4:9:36.30:50,0,36	0/1:10,4:14:68.58:107,0,69	0/1:11,4:15:99:106,0,138	0/1:6,6:10:85.69:86,0,93	0/0:26,0:23:28.08:0,28,197	0/0:26,1:25:11.16:0,11,253	0/1:14,8:17:99:128,0,169	0/1:2,3:4:25.89:26,0,32	0/1:5,1:3:12.17:30,0,12	0/1:6,4:9:56.44:81,0,56	0/1:8,1:9:3.18:3,0,102	0/1:11,3:13:26.61:71,0,27	1/1:15,7:21:4.60:228,5,0	0/1:16,15:27:76.33:495,0,76	0/1:10,7:14:73.99:74,0,133	0/1:10,2:9:32.36:75,0,32
chr10	28725353	.	AAAAAG	A	1616.40	PASS	AB=0.979;AC=26;AF=0.464;AN=56;BaseQRankSum=5.230;DP=429;FS=20.071;HRun=0;HaplotypeScore=96.4319;InbreedingCoeff=-0.6232;MQ=64.81;MQ0=43;MQRankSum=-6.666;QD=4.75;ReadPosRankSum=9.118;VQSLOD=-0.4085;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:17,1:15:34.77:134,0,35	0/1:5,0:5:16.55:17,0,37	0/0:41,0:11:10.60:0,11,123	0/0:41,0:15:28.11:0,28,345	0/1:18,1:15:95.32:116,0,95	0/0:7,0:3:8.98:0,9,72	0/1:15,0:12:51.87:52,0,90	0/1:19,0:18:98.20:112,0,98	1/1:10,1:6:15.47:145,15,0	0/1:22,0:19:46.53:47,0,141	0/1:8,1:8:7.81:24,0,8	0/1:10,0:10:5.94:6,0,88	0/1:9,0:7:13.55:26,0,14	0/1:12,0:12:33.14:113,0,33	0/1:10,1:11:84.25:94,0,84	0/1:10,0:7:4.53:69,0,5	0/1:23,0:20:51.57:52,0,116	0/1:21,0:19:22.39:22,0,236	0/1:21,0:16:36.79:37,0,215	0/1:5,0:4:3.04:3,0,21	0/1:5,0:4:3.35:3,0,39	0/1:7,1:7:42.90:57,0,43	0/1:4,0:4:13.59:14,0,51	0/1:14,0:13:15.89:16,0,69	0/1:21,0:20:84.12:166,0,84	0/1:27,0:23:22.50:310,0,23	0/1:12,0:10:35.46:73,0,35	0/1:8,1:7:5.50:63,0,6
chr10	28725524	.	CA	C	18572.37	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-0.467;DP=606;FS=5.679;HRun=2;HaplotypeScore=130.3225;InbreedingCoeff=0.9957;MQ=68.63;MQ0=0;MQRankSum=-9.051;QD=33.11;ReadPosRankSum=5.374;VQSLOD=4.1064;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,33:34:90.22:1135,90,0	1/1:0,6:6:18.06:234,18,0	0/0:21,0:21:61.73:0,62,854	0/0:24,0:24:67.43:0,67,947	1/1:4,25:29:60.11:733,60,0	1/1:4,17:21:53.50:639,53,0	1/1:2,22:24:69.21:879,69,0	1/1:1,23:24:69.21:878,69,0	1/1:1,17:18:48.03:565,48,0	1/1:0,24:24:69.22:892,69,0	1/1:0,26:26:51.17:662,51,0	1/1:1,21:22:63.19:799,63,0	1/1:1,18:19:54.16:684,54,0	1/1:0,23:23:63.16:796,63,0	1/1:0,16:16:48.16:623,48,0	1/1:0,14:14:42.14:545,42,0	1/1:1,23:24:57.16:722,57,0	1/1:1,18:19:54.09:661,54,0	1/1:1,22:22:57.18:737,57,0	1/1:1,17:18:45.15:584,45,0	1/1:2,27:29:72.22:919,72,0	1/1:3,16:19:45.06:533,45,0	1/1:1,17:18:51:620,51,0	1/1:1,24:25:63.16:799,63,0	1/1:2,15:17:42.14:543,42,0	1/1:3,23:26:72.21:910,72,0	1/1:2,30:32:84.26:1073,84,0	1/1:0,11:11:33.04:407,33,0
chr10	28725588	.	AGTCG	A	24807.37	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=4.128;DP=590;FS=1.104;HRun=0;HaplotypeScore=131.4933;InbreedingCoeff=0.9952;MQ=65.79;MQ0=5;MQRankSum=-9.146;QD=47.61;ReadPosRankSum=6.351;VQSLOD=5.3047;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,34:37:93.30:1712,93,0	1/1:0,7:7:21.07:398,21,0	0/0:39,0:34:89.95:0,90,2234	0/0:30,0:28:74.93:0,75,1928	1/1:3,17:19:30.08:569,30,0	1/1:1,21:22:54.19:1025,54,0	1/1:3,23:26:66.23:1233,66,0	1/1:2,18:20:54.16:989,54,0	1/1:2,17:19:48.16:892,48,0	1/1:0,19:19:48.16:910,48,0	1/1:2,17:18:48.16:894,48,0	1/1:0,21:21:60.21:1139,60,0	1/1:4,14:18:45.15:846,45,0	1/1:0,30:30:81.28:1536,81,0	1/1:3,13:16:42.14:776,42,0	1/1:0,21:21:60.21:1139,60,0	1/1:6,25:30:63.22:1191,63,0	1/1:2,21:23:51.17:968,51,0	1/1:1,12:12:36.12:684,36,0	1/1:1,16:17:48.16:908,48,0	1/1:1,20:21:57.19:1047,57,0	1/1:1,15:16:39.12:687,39,0	1/1:0,11:11:30.08:566,30,0	1/1:0,20:20:48.16:889,48,0	1/1:0,19:19:54.19:1025,54,0	1/1:4,15:19:42.14:791,42,0	1/1:1,27:28:84.29:1594,84,0	1/1:0,8:8:21.07:399,21,0
chr10	28727019	.	A	ATTT	10739.82	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-0.303;DP=316;FS=78.273;HRun=5;HaplotypeScore=81.2689;InbreedingCoeff=0.6104;MQ=64.23;MQ0=2;MQRankSum=-3.408;QD=35.92;ReadPosRankSum=2.771;VQSLOD=0.2787;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,8:16:17:312,17,0	1/1:0,5:5:6.02:131,6,0	0/0:6,0:5:5.22:0,5,115	0/0:11,0:10:21:0,21,250	1/1:5,10:15:36.09:682,36,0	1/1:3,6:8:21.07:452,21,0	1/1:4,8:11:18.05:353,18,0	1/1:6,14:19:39.11:644,39,0	1/1:2,5:6:15.05:327,15,0	1/1:5,7:13:27.09:464,27,0	1/1:3,8:10:18.06:318,18,0	1/1:1,11:12:30.10:644,30,0	1/1:10,2:12:30.07:468,30,0	1/1:2,5:7:3.01:65,3,0	1/1:3,8:11:27.09:539,27,0	1/1:3,5:8:24.07:426,24,0	1/1:6,4:10:24.08:414,24,0	1/1:5,0:5:6.02:83,6,0	1/1:14,3:17:42.13:699,42,0	1/1:5,12:17:33.08:597,33,0	1/1:1,10:11:9.03:196,9,0	1/1:0,5:5:3.01:65,3,0	1/1:5,7:12:21.54:432,22,0	1/1:8,0:8:2.69:71,3,0	1/1:2,12:14:36.08:686,36,0	1/1:2,8:9:24.07:438,24,0	1/1:4,8:12:15.05:302,15,0	1/1:4,16:20:45.15:931,45,0
chr10	28727024	.	TC	T	2975.96	PASS	AB=0.949;AC=38;AF=0.679;AN=56;BaseQRankSum=5.619;DP=280;FS=31.886;HRun=1;HaplotypeScore=81.9760;InbreedingCoeff=-0.0990;MQ=60.35;MQ0=9;MQRankSum=1.476;QD=11.23;ReadPosRankSum=6.183;VQSLOD=-0.0663;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:15,0:14:15.94:16,0,62	1/1:4,0:4:4.72:21,5,0	0/0:5,0:4:5.22:0,5,115	0/0:10,0:9:19.53:0,20,247	0/1:11,1:11:4.70:152,0,5	1/1:8,1:8:18.49:101,18,0	1/1:9,1:9:15.24:84,15,0	0/1:16,0:14:2.57:317,0,3	1/1:7,0:6:14.12:91,14,0	0/1:11,0:10:58.20:156,0,58	1/1:8,0:7:16.18:164,16,0	1/1:12,0:12:25.48:124,25,0	0/1:9,2:11:20.89:137,0,21	0/1:5,0:5:9.23:9,0,30	1/1:10,0:10:0.17:60,0,0	0/1:7,1:8:9.29:92,0,9	1/1:5,4:8:24.07:309,24,0	0/1:2,3:4:0.90:75,0,1	1/1:5,9:14:2.66:377,3,0	1/1:13,1:14:30.67:254,31,0	0/1:11,0:11:13.71:14,0,26	0/1:7,0:7:0.11:0,0,18	0/1:9,0:9:18.51:41,0,19	1/1:2,5:7:6.90:78,7,0	0/1:14,0:14:39.71:102,0,40	1/1:9,0:7:19.35:193,19,0	0/1:9,0:9:15.43:33,0,15	0/1:19,0:19:7.73:134,0,8
chr10	28727712	.	C	CA	25060.01	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-8.662;DP=668;FS=0.589;HRun=1;HaplotypeScore=59.7801;InbreedingCoeff=0.9989;MQ=90.34;MQ0=0;MQRankSum=-10.820;QD=40.55;ReadPosRankSum=5.854;VQSLOD=4.8749;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,57:57:99:2449,166,0	1/1:0,10:10:30.10:449,30,0	0/0:25,0:25:65.87:0,66,720	0/0:25,0:25:60.14:0,60,696	1/1:1,26:27:75.25:1123,75,0	1/1:1,16:16:39.13:584,39,0	1/1:2,24:26:63.21:942,63,0	1/1:0,34:34:99:1481,102,0	1/1:1,19:20:48.16:719,48,0	1/1:0,27:27:81.26:1193,81,0	1/1:1,12:13:30.10:450,30,0	1/1:0,20:20:54.18:809,54,0	1/1:0,11:11:30.10:449,30,0	1/1:1,17:18:45.15:675,45,0	1/1:2,19:21:48.16:719,48,0	1/1:1,18:19:48.16:719,48,0	1/1:0,42:42:99:1618,108,0	1/1:0,22:22:60.20:899,60,0	1/1:2,19:21:60.16:855,60,0	1/1:1,13:14:39.09:559,39,0	1/1:0,43:43:99:1843,123,0	1/1:0,19:19:54.14:784,54,0	1/1:0,25:25:66.22:988,66,0	1/1:1,26:27:75.25:1124,75,0	1/1:0,17:17:51.17:764,51,0	1/1:0,25:25:75.24:1104,75,0	1/1:3,28:31:90.28:1309,90,0	1/1:0,12:12:30.10:450,30,0
chr10	28728301	.	GA	G	1047.47	PASS	AB=0.639;AC=47;AF=0.870;AN=54;BaseQRankSum=5.927;DP=181;FS=23.956;HRun=2;HaplotypeScore=108.3735;InbreedingCoeff=0.3909;MQ=46.23;MQ0=11;MQRankSum=-1.814;QD=6.94;ReadPosRankSum=4.467;VQSLOD=-0.5930;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,4:4:8.16:37,8,0	1/1:1,1:1:2.37:8,2,0	0/0:19,0:10:4.49:0,4,311	0/0:11,0:6:9.03:0,9,135	1/1:0,15:15:19.85:68,20,0	1/1:0,6:6:15.03:55,15,0	1/1:1,5:5:11.49:41,11,0	1/1:1,8:8:22.08:100,22,0	1/1:0,6:6:15.05:56,15,0	1/1:0,10:10:27.84:128,28,0	0/1:0,2:2:1.84:2,0,6	1/1:1,1:2:4.19:14,4,0	1/1:2,4:6:11.50:39,12,0	1/1:0,8:8:19:71,19,0	1/1:0,7:7:18.08:70,18,0	1/1:0,3:3:7.79:30,8,0	0/1:3,3:5:5.54:12,0,6	1/1:2,2:3:5.64:26,6,0	0/1:2,1:3:16.60:17,0,36	1/1:0,7:7:17.38:63,17,0	./.	1/1:1,5:5:12.26:45,12,0	1/1:0,8:8:18.16:61,18,0	1/1:1,1:2:1.55:4,2,0	1/1:0,8:8:18.94:69,19,0	1/1:4,9:10:10.09:85,10,0	1/1:0,5:5:13.96:66,14,0	1/1:2,1:2:2.11:9,2,0
chr10	28728303	.	A	AGT	729.68	PASS	AB=0.929;AC=43;AF=0.796;AN=54;BaseQRankSum=1.511;DP=182;FS=45.973;HRun=0;HaplotypeScore=112.2960;InbreedingCoeff=0.2707;MQ=53.20;MQ0=11;MQRankSum=-1.763;QD=4.86;ReadPosRankSum=0.644;VQSLOD=1.0559;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:4:0.87:5,1,0	1/1:2,0:1:2.04:6,2,0	0/0:20,0:11:29.98:0,30,403	0/0:12,0:7:12.01:0,12,160	1/1:15,0:15:8.54:36,9,0	1/1:6,0:6:2.69:15,3,0	0/1:6,0:5:4.89:14,0,5	1/1:9,0:8:14.80:86,15,0	0/1:6,0:6:0.52:19,0,1	1/1:10,0:10:21.01:100,21,0	0/1:2,0:2:0.23:0,0,9	1/1:1,1:2:3.28:9,3,0	1/1:5,1:6:10.89:57,11,0	1/1:8,0:8:0.62:15,1,0	1/1:7,0:7:13.10:59,13,0	1/1:3,0:3:5.21:17,5,0	0/1:4,2:5:19.33:81,0,19	1/1:4,0:3:4.72:17,5,0	0/1:2,1:3:37.05:45,0,37	1/1:7,0:7:13.53:51,14,0	./.	0/1:6,0:5:0.53:8,0,1	1/1:8,0:8:12.52:47,13,0	1/1:2,0:2:0.89:2,1,0	1/1:8,0:8:12.34:40,12,0	1/1:13,0:10:7.51:80,8,0	1/1:5,0:5:13.41:57,13,0	0/1:2,0:1:0:0,0,0
chr10	28728308	.	A	AC	2387.49	PASS	AB=0.667;AC=49;AF=0.907;AN=54;BaseQRankSum=7.048;DP=194;FS=45.809;HRun=0;HaplotypeScore=107.4836;InbreedingCoeff=0.4890;MQ=67.94;MQ0=10;MQRankSum=-4.798;QD=15.50;ReadPosRankSum=5.977;VQSLOD=2.0966;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,4:5:8.49:46,8,0	1/1:1,1:1:2.94:18,3,0	0/0:25,0:16:32.55:0,33,468	0/0:15,0:10:16.98:0,17,237	1/1:0,15:15:42.99:224,43,0	1/1:0,6:6:17.70:112,18,0	1/1:3,5:7:16.76:100,17,0	1/1:1,8:8:23.90:186,24,0	1/1:0,6:6:17.67:108,18,0	1/1:0,10:10:29.93:241,30,0	1/1:0,2:2:2.81:15,3,0	1/1:0,2:2:5.82:33,6,0	1/1:1,5:6:17.61:107,18,0	1/1:0,8:8:20.41:120,20,0	1/1:0,7:7:20.62:129,21,0	1/1:0,3:3:8.87:57,9,0	1/1:1,5:5:10.62:71,11,0	1/1:2,2:3:5.98:47,6,0	0/1:2,2:4:32.03:46,0,32	1/1:0,7:7:20.64:130,21,0	./.	1/1:1,5:5:14.62:85,15,0	1/1:0,8:8:23.13:126,23,0	1/1:1,1:2:2.80:13,3,0	1/1:0,8:8:23.46:139,23,0	1/1:2,10:10:29.56:210,30,0	1/1:1,5:6:17.93:139,18,0	1/1:1,1:1:2.97:20,3,0
chr10	28728314	.	T	TG	10272.61	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=7.283;DP=332;FS=11.079;HRun=2;HaplotypeScore=154.3012;InbreedingCoeff=0.8456;MQ=59.90;MQ0=4;MQRankSum=-6.304;QD=35.42;ReadPosRankSum=3.039;VQSLOD=2.8087;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,4:12:20.99:256,21,0	1/1:3,1:3:9.03:124,9,0	0/0:27,0:18:34.87:0,35,543	0/0:15,0:10:18.01:0,18,218	1/1:6,16:22:58.07:790,58,0	1/1:5,6:11:32.99:406,33,0	1/1:5,8:13:36.05:471,36,0	1/1:13,8:19:54.18:736,54,0	1/1:5,6:11:29.95:371,30,0	1/1:8,10:18:54.17:737,54,0	1/1:4,2:6:18.06:241,18,0	1/1:3,2:5:14.98:183,15,0	1/1:5,5:10:30.04:375,30,0	1/1:4,8:12:36.05:477,36,0	1/1:5,7:12:36.12:496,36,0	1/1:4,3:7:18.06:245,18,0	1/1:3,5:8:23.97:307,24,0	1/1:6,2:7:15.05:208,15,0	1/1:10,2:11:32.93:390,33,0	1/1:7,7:14:42:529,42,0	1/1:8,0:8:18.03:210,18,0	1/1:5,5:9:24.08:324,24,0	1/1:4,8:12:33.11:447,33,0	1/1:6,1:7:6.02:78,6,0	1/1:6,8:14:42.14:583,42,0	1/1:5,13:18:54.14:718,54,0	1/1:6,7:13:36.12:487,36,0	1/1:1,1:2:6.02:84,6,0
chr10	28728803	.	TA	T	1095.47	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.075;DP=343;FS=6.166;HRun=8;HaplotypeScore=35.3592;InbreedingCoeff=0.8539;MQ=67.84;MQ0=1;MQRankSum=0.011;QD=21.48;ReadPosRankSum=1.960;VQSLOD=3.4051;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:42.13:0,42,507	0/0:8,0:8:21.05:0,21,242	0/0:9,0:8:18.05:0,18,200	0/0:5,0:5:8.99:0,9,83	0/0:17,0:17:48.15:0,48,580	0/0:14,0:14:36.11:0,36,435	0/0:12,0:12:27.05:0,27,311	0/0:24,0:23:51.14:0,51,597	0/0:5,0:5:12.04:0,12,145	0/0:6,0:6:15.05:0,15,181	0/0:14,0:14:39.12:0,39,471	0/0:7,0:7:21.06:0,21,254	0/0:6,0:6:15.05:0,15,179	0/0:7,0:7:15.05:0,15,181	0/0:8,0:8:24.07:0,24,290	0/0:13,0:13:33.09:0,33,388	1/1:1,26:27:63.10:608,63,0	1/1:1,23:24:63.10:608,63,0	0/0:22,0:22:60.18:0,60,725	0/0:17,0:17:45.14:0,45,544	0/0:7,0:7:15.05:0,15,181	0/0:5,0:5:12.04:0,12,145	0/0:4,0:4:9.03:0,9,109	0/0:3,0:3:9.03:0,9,109	0/0:19,0:19:57.17:0,57,689	0/0:20,0:20:51.15:0,51,606	0/0:14,0:14:42.12:0,42,496	0/0:7,0:7:21.06:0,21,254
chr10	28728925	.	CAA	C	3434.33	PASS	AB=0.820;AC=47;AF=0.839;AN=56;BaseQRankSum=-5.804;DP=368;FS=21.398;HRun=16;HaplotypeScore=50.0616;InbreedingCoeff=0.5113;MQ=46.07;MQ0=22;MQRankSum=2.230;QD=10.60;ReadPosRankSum=0.676;VQSLOD=0.7055;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:12,16:23:34.87:298,35,0	1/1:1,2:3:4.82:48,5,0	0/1:11,0:4:2.92:3,0,34	0/0:2,0:1:3.01:0,3,31	1/1:6,4:10:17.31:116,17,0	1/1:8,13:21:35.28:274,35,0	1/1:4,8:11:17.96:151,18,0	1/1:11,16:28:34.05:380,34,0	1/1:7,7:15:17.66:136,18,0	1/1:4,5:9:17.63:137,18,0	1/1:1,9:12:20.67:203,21,0	0/1:4,5:9:26.31:82,0,26	1/1:4,3:6:11.87:92,12,0	1/1:1,5:6:8.97:75,9,0	0/1:7,1:9:3.12:20,0,3	1/1:6,5:13:5.57:78,6,0	0/0:21,0:27:43.72:0,44,380	0/0:9,0:11:20.99:0,21,197	1/1:8,9:18:22.58:207,23,0	1/1:3,4:9:20.46:147,20,0	1/1:5,7:11:20.36:149,20,0	1/1:1,1:3:5.70:37,6,0	1/1:4,2:4:5.99:50,6,0	1/1:7,5:13:16.76:118,17,0	1/1:1,9:11:14.95:167,15,0	1/1:5,11:17:29.45:237,29,0	1/1:13,7:22:14.19:152,14,0	1/1:4,5:6:8.92:75,9,0
chr10	28731811	.	ATCAAACT	A	21583.53	PASS	AC=50;AF=0.926;AN=54;BaseQRankSum=5.417;DP=505;FS=11.959;HRun=0;HaplotypeScore=141.4399;InbreedingCoeff=0.9580;MQ=68.33;MQ0=0;MQRankSum=-10.304;QD=46.92;ReadPosRankSum=5.674;VQSLOD=3.7708;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	1/1:1,9:8:21.07:538,21,0	0/0:20,0:20:56.68:0,57,2000	0/0:25,0:25:66.16:0,66,2311	1/1:2,19:18:32.85:845,33,0	1/1:0,17:13:33.11:846,33,0	1/1:3,21:23:48.16:1152,48,0	1/1:6,25:29:72.19:1529,72,0	1/1:3,28:29:63.22:1615,63,0	1/1:2,14:11:27.09:692,27,0	1/1:2,10:11:18.06:461,18,0	1/1:2,17:17:36.12:922,36,0	1/1:0,15:14:26.70:692,27,0	1/1:1,25:23:63.22:1615,63,0	1/1:2,21:22:54.19:1384,54,0	1/1:0,17:15:42.14:1077,42,0	1/1:5,10:14:18.06:461,18,0	1/1:3,9:12:21.07:538,21,0	1/1:0,7:7:21.05:461,21,0	1/1:2,12:14:20.71:481,21,0	1/1:6,20:26:27.09:692,27,0	1/1:1,25:22:45.15:1112,45,0	1/1:2,13:12:30.10:727,30,0	1/1:3,8:10:15.05:364,15,0	1/1:1,23:23:54.19:1380,54,0	1/1:2,14:14:36.12:923,36,0	1/1:3,24:15:30.10:769,30,0	1/1:0,5:4:12.04:308,12,0
chr10	28731896	.	ACACGCACGCACG	A	7109.65	PASS	AC=44;AF=0.957;AN=46;DP=476;FS=0.000;HRun=0;HaplotypeScore=211.9493;InbreedingCoeff=0.0983;MQ=51.55;MQ0=7;QD=18.42;VQSLOD=3.2857;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	1/1:12,4:14:9.03:245,9,0	1/1:13,0:12:6.02:149,6,0	./.	0/0:18,0:18:0:0,0,0	1/1:21,6:27:24.08:745,24,0	1/1:14,1:14:14.98:332,15,0	1/1:9,2:5:5.97:122,6,0	1/1:17,3:19:18.06:583,18,0	1/1:12,5:16:18.06:588,18,0	1/1:11,2:12:6.02:182,6,0	1/1:10,4:14:18.03:461,18,0	1/1:3,7:10:18.06:569,18,0	1/1:22,1:23:3.01:103,3,0	1/1:12,1:13:3.01:103,3,0	1/1:13,1:13:9:196,9,0	1/1:21,4:22:24.05:485,24,0	1/1:40,0:39:3:25,3,0	1/1:11,0:10:3.01:103,3,0	1/1:6,1:4:6.02:139,6,0	1/1:21,0:19:15.01:273,15,0	1/1:19,11:26:24.07:628,24,0	1/1:16,3:17:18.06:553,18,0	1/1:18,3:19:18.04:467,18,0	1/1:4,1:2:3.01:61,3,0
chr10	28732167	.	T	TG	5227.46	PASS	AC=50;AF=0.926;AN=54;BaseQRankSum=-3.049;DP=428;FS=24.460;HRun=1;HaplotypeScore=97.8722;InbreedingCoeff=0.8646;MQ=66.34;MQ0=1;MQRankSum=0.466;QD=12.97;ReadPosRankSum=3.272;VQSLOD=2.4456;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	1/1:6,2:8:9.34:131,9,0	0/0:14,0:9:19.88:0,20,139	0/0:11,0:8:17.11:0,17,104	1/1:21,0:21:22.98:241,23,0	1/1:13,0:13:24.99:139,25,0	1/1:14,0:14:18.73:87,19,0	1/1:21,0:21:38.18:232,38,0	1/1:21,0:21:34.56:191,35,0	1/1:16,0:16:38.49:254,38,0	1/1:11,0:11:19.74:120,20,0	1/1:9,0:9:13.89:99,14,0	1/1:8,0:8:16.75:89,17,0	1/1:10,1:11:15.07:90,15,0	1/1:13,0:13:24.08:99,24,0	1/1:19,0:19:37.96:202,38,0	1/1:10,12:22:60.86:692,61,0	1/1:1,20:22:38.62:538,39,0	1/1:13,2:15:37.82:323,38,0	1/1:19,1:20:16.11:173,16,0	1/1:21,0:21:46.58:280,47,0	1/1:11,0:11:17.58:90,18,0	1/1:13,0:13:5.22:101,5,0	1/1:11,0:11:17.28:123,17,0	1/1:24,0:24:42.13:257,42,0	1/1:26,0:26:57.02:404,57,0	1/1:22,0:22:35.58:181,36,0	1/1:11,0:11:21.58:89,22,0
chr10	28733103	.	A	AG	17646.80	PASS	AB=0.882;AC=53;AF=0.946;AN=56;BaseQRankSum=-2.477;DP=594;FS=11.333;HRun=1;HaplotypeScore=101.7957;InbreedingCoeff=0.5514;MQ=54.45;MQ0=12;MQRankSum=-4.573;QD=30.64;ReadPosRankSum=3.521;VQSLOD=3.4408;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,1:2:3.01:35,3,0	1/1:0,7:7:15.05:223,15,0	0/1:13,2:13:12.54:13,0,298	0/0:18,0:14:37.30:0,37,438	1/1:1,12:13:30.10:449,30,0	1/1:0,20:19:39.13:583,39,0	1/1:0,22:14:6.02:90,6,0	1/1:2,13:13:36.08:511,36,0	1/1:2,26:26:60.20:898,60,0	1/1:1,31:28:75.23:1094,75,0	1/1:2,11:12:24.08:359,24,0	1/1:3,28:29:66.20:962,66,0	1/1:2,17:17:39.13:574,39,0	1/1:2,15:17:39.13:584,39,0	1/1:0,26:25:63.17:918,63,0	1/1:0,24:23:57.19:844,57,0	1/1:1,36:36:75.25:1123,75,0	1/1:2,17:18:45.15:673,45,0	1/1:2,20:19:51.17:744,51,0	1/1:0,15:15:36.12:539,36,0	1/1:2,44:41:87.29:1302,87,0	1/1:1,20:18:51.17:763,51,0	1/1:1,17:15:33.11:493,33,0	1/1:2,41:41:99:1471,99,0	1/1:1,16:17:39.09:559,39,0	1/1:1,24:24:66.22:987,66,0	1/1:0,18:15:33.11:494,33,0	1/1:0,11:10:24.08:359,24,0
chr10	28733347	.	CA	C	2954.31	PASS	AB=0.580;AC=42;AF=0.808;AN=52;BaseQRankSum=-3.268;DP=269;FS=28.792;HRun=11;HaplotypeScore=64.0522;InbreedingCoeff=0.4068;MQ=65.97;MQ0=4;MQRankSum=-2.354;QD=13.49;ReadPosRankSum=4.727;VQSLOD=1.6767;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:3,0:3:0:0,0,0	0/1:1,3:4:19.50:62,0,20	0/0:17,1:15:2.76:0,3,119	0/0:17,0:17:31.52:0,32,233	1/1:3,10:13:29.56:231,30,0	0/1:3,7:10:42.67:102,0,43	1/1:3,1:2:3:25,3,0	1/1:2,4:4:11.99:98,12,0	1/1:7,10:16:3.93:238,4,0	1/1:6,11:17:12.28:225,12,0	1/1:4,5:9:17.20:130,17,0	1/1:4,8:12:25.89:193,26,0	1/1:2,7:9:17.96:147,18,0	1/1:5,4:8:2.98:25,3,0	1/1:1,4:5:8.97:74,9,0	1/1:7,7:13:19.98:154,20,0	1/1:5,3:8:8.99:74,9,0	./.	1/1:4,3:7:8.97:74,9,0	1/1:4,6:10:23.96:194,24,0	0/0:4,0:4:0.89:0,1,2	1/1:3,8:11:26.95:220,27,0	1/1:4,7:12:25.50:187,26,0	./.	1/1:5,5:10:14.97:123,15,0	1/1:6,9:15:29.94:245,30,0	1/1:5,4:7:14.91:117,15,0	1/1:1,5:6:17.98:147,18,0
chr10	28733358	.	AG	A	882.04	PASS	AB=0.965;AC=32;AF=0.615;AN=52;BaseQRankSum=3.432;DP=242;FS=8.368;HRun=1;HaplotypeScore=75.6652;InbreedingCoeff=-0.1071;MQ=71.00;MQ0=0;MQRankSum=-2.213;QD=4.10;ReadPosRankSum=7.068;VQSLOD=0.0929;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/1:4,0:4:8.76:9,0,30	0/1:16,0:13:3.69:4,0,204	0/0:18,0:17:19.31:0,19,230	0/1:15,1:16:32.74:62,0,33	0/1:10,0:10:15.20:15,0,65	1/1:2,0:2:3.59:10,4,0	0/1:7,0:6:3.22:3,0,27	0/1:12,1:13:17.15:93,0,17	0/1:21,0:20:33.75:34,0,88	1/1:7,1:8:3.54:49,4,0	1/1:12,0:11:11.94:87,12,0	1/1:8,0:8:15.72:68,16,0	0/1:6,1:6:0.34:0,0,29	0/1:5,0:5:12.67:14,0,13	0/1:9,0:9:3.28:30,0,3	0/1:4,0:4:9.33:21,0,9	1/1:2,0:1:2.74:12,3,0	0/0:5,0:5:2.15:0,2,35	1/1:8,1:9:5.90:97,6,0	./.	0/1:12,1:13:24.11:91,0,24	1/1:10,0:10:10.91:68,11,0	0/0:3,0:3:2.77:0,3,18	0/1:6,0:6:1.34:31,0,1	0/1:15,1:16:26.11:81,0,26	1/1:6,2:6:12.62:76,13,0	1/1:6,1:6:12.29:75,12,0
chr10	28733376	.	A	AAAAAAAACACACACAC	22797.94	PASS	AB=1.000;AC=47;AF=0.870;AN=54;BaseQRankSum=2.378;DP=310;FS=13.065;HRun=0;HaplotypeScore=297.4647;InbreedingCoeff=0.6811;MQ=75.19;MQ0=0;MQRankSum=-4.020;QD=83.51;ReadPosRankSum=3.979;VQSLOD=3.1087;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	1/1:1,0:2:6.02:301,6,0	0/0:18,0:17:45.01:0,45,929	0/0:16,0:14:18.33:0,18,535	1/1:16,2:18:41.91:1125,42,0	1/1:9,2:12:33.08:1265,33,0	1/1:6,1:7:18.06:786,18,0	1/1:18,0:17:51.03:1709,51,0	1/1:16,0:16:46.59:1047,47,0	1/1:25,2:27:75.19:2806,75,0	1/1:11,1:15:25.18:1040,25,0	1/1:11,3:13:33.11:1294,33,0	1/1:9,1:10:10.14:333,10,0	1/1:10,0:10:12.84:736,13,0	1/1:7,0:7:18.06:589,18,0	1/1:12,0:12:27.09:900,27,0	1/1:6,0:8:21.07:857,21,0	1/1:1,0:2:3.01:212,3,0	1/1:2,0:2:6.02:128,6,0	1/1:8,1:9:27.09:918,27,0	0/0:2,0:2:4.44:0,4,14	1/1:18,2:19:41.15:2095,41,0	1/1:4,1:6:15.05:453,15,0	0/1:7,0:7:2.34:381,0,2	1/1:10,0:10:24.08:696,24,0	1/1:16,2:20:57.13:1906,57,0	1/1:10,1:8:7.15:737,7,0	1/1:7,0:6:14.98:484,15,0
chr10	28733406	.	C	CCA	1440.76	PASS	AB=0.500;AC=37;AF=0.841;AN=44;BaseQRankSum=5.348;DP=92;FS=20.511;HRun=0;HaplotypeScore=92.6213;InbreedingCoeff=0.4925;MQ=134.65;MQ0=0;MQRankSum=-5.088;QD=22.87;ReadPosRankSum=2.838;VQSLOD=2.7840;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:17,0:17:36.03:0,36,520	0/0:10,0:8:18.44:0,18,236	1/1:0,3:3:8.42:49,8,0	1/1:0,3:3:9.02:102,9,0	./.	./.	1/1:0,3:3:9.02:104,9,0	1/1:0,4:4:12.04:183,12,0	0/0:0,2:2:4.44:0,4,14	1/1:0,5:5:10.27:106,10,0	1/1:1,2:3:5.24:21,5,0	1/1:0,6:6:7.91:90,8,0	0/1:0,2:2:0.21:39,0,0	1/1:1,4:5:12.04:165,12,0	1/1:0,2:2:5.75:56,6,0	1/1:0,1:1:3.01:32,3,0	1/1:0,1:1:3.01:46,3,0	1/1:0,1:1:2.74:12,3,0	1/1:0,2:2:5.49:24,5,0	1/1:0,6:5:6.08:82,6,0	./.	1/1:0,3:3:8.75:80,9,0	1/1:1,3:4:9.02:117,9,0	1/1:0,4:4:12.04:182,12,0	1/1:0,5:4:11.24:79,11,0	./.
chr10	28733407	.	T	TGCCAGGAAACTTGGTAAG	24862.62	PASS	AC=48;AF=0.923;AN=52;BaseQRankSum=4.739;DP=178;FS=60.822;HRun=0;HaplotypeScore=115.6681;InbreedingCoeff=0.6636;MQ=98.88;MQ0=0;MQRankSum=-6.481;QD=164.65;ReadPosRankSum=2.325;VQSLOD=2.7251;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:17,0:17:30.05:0,30,1203	0/0:10,0:8:15.81:0,16,519	1/1:2,3:5:12.04:718,12,0	1/1:3,3:6:15.05:949,15,0	1/1:5,0:5:12.04:781,12,0	1/1:4,0:4:8.99:394,9,0	1/1:3,3:6:15.05:1049,15,0	1/1:7,4:11:33.07:2420,33,0	1/1:0,2:2:6.02:431,6,0	1/1:5,5:10:27.09:1998,27,0	1/1:7,2:9:18.06:1287,18,0	1/1:7,5:12:30.10:2101,30,0	1/1:3,2:5:15.05:998,15,0	1/1:6,4:10:27.09:1749,27,0	1/1:2,2:4:12.04:885,12,0	1/1:6,1:7:18.06:1115,18,0	1/1:3,1:4:9.03:559,9,0	1/1:1,1:2:6.02:362,6,0	1/1:6,2:8:21.07:762,21,0	1/1:2,6:7:21.07:1213,21,0	1/1:1,0:1:3.01:129,3,0	1/1:4,3:7:18.06:944,18,0	1/1:2,3:5:15.04:810,15,0	1/1:4,4:8:21.07:1492,21,0	1/1:6,5:10:27.09:1597,27,0	1/1:1,0:1:3.01:121,3,0
chr10	28733548	.	A	AT	15957.73	PASS	AC=50;AF=0.926;AN=54;BaseQRankSum=6.259;DP=476;FS=3.527;HRun=1;HaplotypeScore=141.9669;InbreedingCoeff=0.7557;MQ=73.97;MQ0=0;MQRankSum=-10.016;QD=38.36;ReadPosRankSum=6.179;VQSLOD=4.0937;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	1/1:0,2:2:6.02:90,6,0	0/0:22,0:21:51.10:0,51,627	0/0:38,0:37:91.72:0,92,1063	1/1:1,6:7:9.03:135,9,0	1/1:1,20:21:48.16:717,48,0	1/1:2,17:19:51.17:757,51,0	1/1:4,22:26:69.19:1003,69,0	1/1:0,19:19:57.19:843,57,0	1/1:0,18:18:51.17:762,51,0	1/1:0,6:6:15.05:224,15,0	1/1:0,28:28:72.24:1075,72,0	1/1:0,18:18:51.17:753,51,0	1/1:0,25:25:72.24:1067,72,0	1/1:0,22:22:66.22:978,66,0	1/1:2,19:21:45.15:673,45,0	1/1:1,27:28:69.23:1033,69,0	1/1:0,18:18:48.16:719,48,0	1/1:1,12:13:39.13:580,39,0	1/1:0,9:9:21.07:314,21,0	1/1:2,30:32:75.25:1121,75,0	1/1:0,8:9:24.04:330,24,0	1/1:1,4:5:3.01:44,3,0	1/1:0,30:30:78.26:1168,78,0	1/1:0,2:2:3.01:45,3,0	1/1:1,19:20:57.19:853,57,0	1/1:1,12:13:36.12:539,36,0	1/1:1,4:5:8.86:135,9,0
chr10	28734244	.	T	TG	2358.82	PASS	AB=1.000;AC=47;AF=0.870;AN=54;BaseQRankSum=1.342;DP=219;FS=38.196;HRun=1;HaplotypeScore=96.9587;InbreedingCoeff=0.2918;MQ=32.86;MQ0=5;MQRankSum=0.482;QD=11.68;ReadPosRankSum=-1.581;VQSLOD=-0.1466;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,0:8:4.07:12,4,0	1/1:4,0:4:4.07:12,4,0	0/0:6,0:2:6.01:0,6,60	0/0:7,0:2:6.02:0,6,70	1/1:11,0:11:15.59:45,16,0	1/1:10,0:10:6.11:18,6,0	0/1:4,0:4:0:0,0,7	1/1:27,0:27:38.05:808,38,0	0/1:6,0:6:2.92:9,0,3	1/1:16,0:16:37.34:377,37,0	1/1:11,0:11:6.11:18,6,0	0/1:8,0:8:14.29:33,0,14	1/1:1,0:1:3.01:41,3,0	1/1:3,0:3:2.04:6,2,0	1/1:9,0:9:6.11:18,6,0	1/1:6,0:6:4.07:12,4,0	1/1:3,3:6:17.57:178,18,0	1/1:2,3:4:9.03:134,9,0	1/1:5,0:5:7.50:52,7,0	1/1:11,0:11:10.19:30,10,0	./.	1/1:4,0:4:4.07:12,4,0	1/1:5,0:5:3.59:10,4,0	1/1:3,0:3:0.47:1,0,0	1/1:8,0:8:0.06:50,0,0	1/1:15,0:15:26.77:327,27,0	1/1:13,0:13:0.77:178,1,0	1/1:3,0:3:9.02:99,9,0
chr10	28734250	.	T	TG	1225.10	PASS	AB=0.972;AC=35;AF=0.648;AN=54;BaseQRankSum=3.936;DP=222;FS=12.709;HRun=1;HaplotypeScore=90.5086;InbreedingCoeff=0.1311;MQ=34.02;MQ0=2;MQRankSum=-0.698;QD=6.52;ReadPosRankSum=-0.383;VQSLOD=-0.6668;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,0:9:4.07:12,4,0	0/1:4,0:4:1.10:1,0,16	0/0:5,0:2:3.48:0,3,30	0/0:5,0:2:6.02:0,6,73	1/1:11,1:12:17.63:51,18,0	0/0:10,0:10:8.94:0,9,64	0/0:4,0:4:0.26:0,0,24	0/1:19,10:29:99:357,0,446	0/1:6,0:6:8.72:9,0,19	1/1:16,0:16:33.61:302,34,0	1/1:10,1:11:6.11:18,6,0	0/1:8,0:8:15.04:15,0,48	1/1:1,0:1:3:25,3,0	1/1:3,0:3:2.04:6,2,0	1/1:9,0:9:6.11:18,6,0	0/1:6,0:6:0.93:1,0,17	0/1:6,0:6:12.94:13,0,80	0/0:4,0:4:12.01:0,12,115	1/1:5,0:5:12.02:132,12,0	1/1:11,0:11:10.19:30,10,0	./.	1/1:4,0:4:4.07:12,4,0	1/1:5,0:5:3.59:10,4,0	1/1:3,0:3:0.47:1,0,0	0/1:8,0:8:14.83:15,0,17	0/1:16,0:16:10.72:183,0,11	0/1:13,0:13:34.09:97,0,34	1/1:3,0:3:8.91:74,9,0
chr10	28734253	.	G	GGTGTATATA	10678.51	PASS	AB=0.531;AC=33;AF=0.868;AN=38;BaseQRankSum=-1.050;DP=298;FS=2.044;HRun=0;HaplotypeScore=92.4411;InbreedingCoeff=0.4501;MQ=37.96;MQ0=2;MQRankSum=0.504;QD=52.86;ReadPosRankSum=2.859;VQSLOD=4.4338;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:2,13:17:0:0,0,0	1/1:0,4:4:3:74,3,0	0/0:5,0:2:3.48:0,3,32	0/0:5,0:2:6.01:0,6,68	./.	1/1:1,11:12:9.03:218,9,0	1/1:1,5:7:3.01:54,3,0	1/1:23,0:33:46.63:3385,47,0	1/1:1,6:7:3.01:55,3,0	1/1:2,19:23:41.95:1803,42,0	./.	1/1:0,10:13:9.03:252,9,0	1/1:1,2:3:6.02:259,6,0	./.	./.	1/1:1,7:9:3.01:90,3,0	1/1:6,0:7:21.07:562,21,0	1/1:4,0:4:12.04:221,12,0	1/1:1,5:7:15.05:611,15,0	./.	./.	./.	./.	./.	1/1:2,15:18:5.68:182,6,0	1/1:0,17:18:38.61:1623,39,0	1/1:1,12:15:24.08:858,24,0	1/1:2,3:5:9.03:433,9,0
chr10	28735035	.	AT	A	13825.66	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=3.776;DP=494;FS=0.000;HRun=2;HaplotypeScore=53.8362;InbreedingCoeff=0.9869;MQ=93.08;MQ0=0;MQRankSum=-5.258;QD=34.48;ReadPosRankSum=0.913;VQSLOD=4.8009;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,28:28:78.25:1012,78,0	1/1:0,10:10:30.10:389,30,0	0/0:23,0:23:66.21:0,66,944	0/0:23,0:23:60.18:0,60,861	1/1:0,19:19:54.13:682,54,0	1/1:0,9:9:27.03:330,27,0	1/1:1,17:18:51.16:655,51,0	1/1:0,13:13:39.13:506,39,0	1/1:1,8:9:18.06:233,18,0	1/1:0,11:11:33.11:428,33,0	1/1:0,11:11:30.09:389,30,0	1/1:0,16:16:39.13:506,39,0	1/1:0,16:16:33.11:427,33,0	1/1:0,15:15:36.12:467,36,0	1/1:0,22:22:63.15:798,63,0	1/1:1,19:20:48.10:602,48,0	0/0:26,0:26:75.25:0,75,1122	0/0:21,0:21:60.19:0,60,877	1/1:2,12:14:36.12:464,36,0	1/1:0,17:17:51.12:643,51,0	1/1:2,44:46:99:1518,117,0	1/1:0,7:7:21.07:272,21,0	1/1:2,12:14:30.57:390,31,0	1/1:0,39:39:99:1380,108,0	1/1:0,9:9:27.03:330,27,0	1/1:0,13:13:39.08:487,39,0	1/1:0,21:21:60.14:758,60,0	1/1:0,4:4:12.04:156,12,0
chr10	28735360	.	CTTT	C	5583.22	PASS	AB=0.659;AC=47;AF=0.839;AN=56;BaseQRankSum=-1.785;DP=481;FS=7.167;HRun=16;HaplotypeScore=104.0215;InbreedingCoeff=0.2246;MQ=54.71;MQ0=7;MQRankSum=-0.955;QD=13.01;ReadPosRankSum=2.236;VQSLOD=2.9034;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,23:30:41.96:448,42,0	1/1:5,5:11:17.75:166,18,0	0/0:28,0:6:2.69:0,3,53	0/0:23,0:6:4.26:0,4,47	1/1:2,11:15:29.99:324,30,0	1/1:1,13:14:19.41:223,19,0	0/1:2,10:14:2.98:202,0,3	1/1:8,13:20:20.02:292,20,0	1/1:7,5:13:19.76:207,20,0	1/1:5,11:15:29.93:319,30,0	1/1:6,5:14:13.28:170,13,0	1/1:4,6:11:11.78:114,12,0	0/1:3,5:7:1.43:113,0,1	0/1:7,2:9:0.20:85,0,0	1/1:7,11:18:9.53:231,10,0	1/1:2,10:12:11.94:129,12,0	1/1:11,0:29:0.41:141,0,0	0/1:13,7:21:18.13:278,0,18	1/1:6,7:12:20.96:219,21,0	1/1:8,8:18:16.16:169,16,0	1/1:10,3:14:16.34:179,16,0	1/1:4,10:14:31.35:329,31,0	1/1:6,11:15:14.79:161,15,0	1/1:7,16:22:11.01:155,11,0	1/1:7,20:26:40.35:448,40,0	1/1:3,9:11:20.88:226,21,0	0/1:5,12:17:22.02:128,0,22	1/1:1,7:9:10.47:126,10,0
chr10	28735528	.	GCTTCCAGGCTGGCTCAGGCTCCTCTGGATCTA	G	4867.61	PASS	AC=36;AF=0.900;AN=40;BaseQRankSum=3.924;DP=82;FS=8.142;HRun=0;HaplotypeScore=113.6805;InbreedingCoeff=0.3096;MQ=172.55;MQ0=0;MQRankSum=-7.218;QD=157.02;ReadPosRankSum=3.507;VQSLOD=4.1055;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,0:3:3.01:57,3,0	./.	0/0:23,0:23:69.07:0,69,3998	0/0:24,0:24:72.14:0,72,4759	./.	1/1:1,0:1:3:25,3,0	./.	1/1:2,0:2:6.02:108,6,0	1/1:0,1:1:3.01:249,3,0	1/1:0,1:1:3.01:246,3,0	./.	1/1:1,1:2:6.02:285,6,0	1/1:0,3:3:9.03:747,9,0	1/1:0,1:1:3.01:249,3,0	./.	1/1:0,2:2:6.02:497,6,0	1/1:0,1:1:3.01:247,3,0	1/1:1,0:1:3.01:39,3,0	1/1:0,1:1:3.01:248,3,0	1/1:0,1:1:3.01:248,3,0	./.	./.	1/1:0,2:2:6.02:189,6,0	1/1:1,1:2:6.02:285,6,0	1/1:2,2:4:12.04:592,12,0	1/1:0,1:2:6.02:308,6,0	1/1:0,1:1:3.01:249,3,0	./.
chr10	28735563	.	CAA	C	253.39	PASS	AC=26;AF=0.867;AN=30;BaseQRankSum=5.988;DP=63;FS=1.119;HRun=3;HaplotypeScore=84.5130;InbreedingCoeff=0.3406;MQ=203.53;MQ0=0;MQRankSum=-6.004;QD=14.91;ReadPosRankSum=5.988;VQSLOD=0.5799;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:22,0:22:63.22:0,63,1225	0/0:22,0:22:66.20:0,66,1265	./.	./.	./.	./.	1/1:0,1:1:2.99:23,3,0	1/1:0,1:1:2.99:23,3,0	./.	1/1:0,1:1:2.98:21,3,0	1/1:0,3:3:8.93:63,9,0	1/1:0,1:1:2.97:20,3,0	./.	1/1:0,2:2:5.95:43,6,0	1/1:0,1:1:2.98:21,3,0	./.	1/1:0,1:1:2.99:23,3,0	1/1:0,1:1:2.98:21,3,0	./.	./.	./.	1/1:0,1:1:2.97:20,3,0	1/1:0,2:2:5.93:40,6,0	1/1:0,1:1:2.98:21,3,0	1/1:0,1:1:2.98:22,3,0	./.
chr10	28735566	.	TTGCC	T	416.49	PASS	AC=26;AF=0.867;AN=30;BaseQRankSum=5.967;DP=61;FS=2.453;HRun=0;HaplotypeScore=87.4309;InbreedingCoeff=0.3369;MQ=201.85;MQ0=0;MQRankSum=-5.983;QD=24.50;ReadPosRankSum=5.967;VQSLOD=3.0755;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:20,0:20:60.21:0,60,1659	0/0:22,0:22:66.22:0,66,1744	./.	./.	./.	./.	1/1:0,1:1:3.01:31,3,0	1/1:0,1:1:3.01:31,3,0	./.	1/1:0,1:1:3.01:31,3,0	1/1:0,3:3:9.02:95,9,0	1/1:0,1:1:3.01:32,3,0	./.	1/1:0,2:2:6.01:61,6,0	1/1:0,1:1:3.01:31,3,0	./.	1/1:0,1:1:3.01:32,3,0	1/1:0,1:1:3.01:31,3,0	./.	./.	./.	1/1:0,1:1:3.01:31,3,0	1/1:0,2:2:6.01:59,6,0	1/1:0,1:1:3:28,3,0	1/1:0,1:1:3.01:30,3,0	./.
chr10	28735575	.	TTG	T	396.18	PASS	AC=26;AF=0.867;AN=30;BaseQRankSum=5.848;DP=58;FS=1.125;HRun=0;HaplotypeScore=81.5946;InbreedingCoeff=0.3371;MQ=199.65;MQ0=0;MQRankSum=-5.867;QD=23.30;ReadPosRankSum=5.848;VQSLOD=3.6187;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:20,0:20:60.17:0,60,1136	0/0:19,0:19:51.02:0,51,916	./.	./.	./.	./.	1/1:0,1:1:3.01:32,3,0	1/1:0,1:1:3.01:30,3,0	./.	1/1:0,1:1:3.01:30,3,0	1/1:0,3:3:9.01:87,9,0	1/1:0,1:1:3:29,3,0	./.	1/1:0,2:2:6.01:61,6,0	1/1:0,1:1:3:28,3,0	./.	1/1:0,1:1:3.01:34,3,0	1/1:0,1:1:3.01:30,3,0	./.	./.	./.	1/1:0,1:1:3:28,3,0	1/1:0,2:2:6.01:58,6,0	1/1:0,1:1:3:25,3,0	1/1:0,1:1:3.01:31,3,0	./.
chr10	28735578	.	CAA	C	310.77	PASS	AC=28;AF=0.875;AN=32;BaseQRankSum=6.306;DP=61;FS=1.059;HRun=3;HaplotypeScore=81.0832;InbreedingCoeff=0.3589;MQ=189.94;MQ0=0;MQRankSum=-6.354;QD=14.13;ReadPosRankSum=3.453;VQSLOD=0.8618;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:18,0:18:54.19:0,54,1038	0/0:19,0:19:54.19:0,54,1007	./.	./.	./.	./.	1/1:1,1:2:5.35:29,5,0	1/1:0,1:1:2.98:22,3,0	./.	1/1:1,1:2:3.85:22,4,0	1/1:0,3:3:8.90:59,9,0	1/1:0,1:1:2.97:20,3,0	1/1:3,0:3:8.50:66,9,0	1/1:0,2:2:5.94:42,6,0	1/1:0,1:1:2.97:20,3,0	./.	1/1:0,1:1:2.99:23,3,0	1/1:0,1:1:2.98:21,3,0	./.	./.	./.	1/1:0,1:1:2.96:19,3,0	1/1:0,2:2:5.92:39,6,0	1/1:0,1:1:2.97:20,3,0	1/1:0,1:1:2.98:21,3,0	./.
chr10	28735583	.	GC	G	914.92	PASS	AC=32;AF=0.800;AN=40;BaseQRankSum=4.345;DP=82;FS=0.000;HRun=2;HaplotypeScore=64.9020;InbreedingCoeff=0.4232;MQ=165.59;MQ0=0;MQRankSum=-7.004;QD=25.41;ReadPosRankSum=0.420;VQSLOD=3.2742;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,0:1:2.99:23,3,0	./.	0/0:20,0:20:47.34:0,47,735	0/0:19,0:19:57.14:0,57,795	./.	./.	./.	./.	1/1:1,1:2:6:56,6,0	1/1:0,1:1:3.01:32,3,0	./.	1/1:1,1:2:6.01:60,6,0	1/1:2,3:5:15.04:171,15,0	1/1:0,1:1:3.01:33,3,0	1/1:4,0:4:11.99:102,12,0	1/1:1,2:3:6.01:64,6,0	1/1:1,1:2:5.99:54,6,0	0/0:1,0:1:0.47:0,0,1	1/1:1,4:4:12.04:146,12,0	1/1:0,1:1:3.01:32,3,0	1/1:1,1:1:3.01:38,3,0	./.	0/0:0,4:4:0:0,0,0	1/1:0,1:1:3.01:32,3,0	1/1:0,2:2:6.01:61,6,0	1/1:1,1:2:6.01:58,6,0	1/1:1,1:2:6.02:70,6,0	./.
chr10	28735993	.	G	GC	24615.48	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=0.634;DP=625;FS=0.000;HRun=0;HaplotypeScore=132.1333;InbreedingCoeff=0.9984;MQ=75.60;MQ0=0;MQRankSum=-8.466;QD=41.30;ReadPosRankSum=3.496;VQSLOD=4.1702;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,47:49:99:2128,144,0	1/1:0,10:10:27.09:401,27,0	0/0:15,0:14:39.06:0,39,521	0/0:14,0:14:36.11:0,36,487	1/1:0,28:28:81.27:1211,81,0	1/1:0,17:17:48.16:717,48,0	1/1:1,25:26:69.23:1029,69,0	1/1:0,28:28:84.25:1180,84,0	1/1:1,26:27:81.25:1178,81,0	1/1:0,31:31:93.31:1368,93,0	1/1:3,25:28:75.25:1111,75,0	1/1:1,27:28:72.24:1067,72,0	1/1:0,25:25:69.23:1025,69,0	1/1:0,16:16:39.06:554,39,0	1/1:1,15:16:48.16:711,48,0	1/1:0,26:26:78.20:1136,78,0	1/1:2,40:42:99:1616,108,0	1/1:0,22:22:63.21:935,63,0	1/1:1,12:13:36.12:533,36,0	1/1:0,28:28:75.25:1119,75,0	1/1:0,13:13:30.10:443,30,0	1/1:2,20:22:63.20:917,63,0	1/1:0,17:17:48.16:711,48,0	1/1:4,17:21:63.11:870,63,0	1/1:0,15:15:39.13:582,39,0	1/1:0,26:26:78.22:1108,78,0	1/1:0,13:13:39.13:562,39,0	1/1:0,9:9:27.09:403,27,0
chr10	28736138	.	A	AC	24843.78	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=1.216;DP=632;FS=5.266;HRun=0;HaplotypeScore=125.0531;InbreedingCoeff=0.9946;MQ=80.56;MQ0=10;MQRankSum=-9.898;QD=41.90;ReadPosRankSum=3.811;VQSLOD=4.1722;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,43:46:99:1995,129,0	1/1:2,8:10:30.07:414,30,0	0/0:27,0:27:75.17:0,75,1001	0/0:12,0:12:19.84:0,20,361	1/1:0,18:18:47.90:733,48,0	1/1:0,16:16:48.16:766,48,0	1/1:0,17:17:42.14:668,42,0	1/1:1,26:25:75.22:1147,75,0	1/1:2,36:37:99:1601,105,0	1/1:3,21:23:72.20:1122,72,0	1/1:3,8:11:30.05:429,30,0	1/1:4,19:22:60.20:946,60,0	1/1:7,19:26:72.17:1047,72,0	1/1:1,19:20:60.20:957,60,0	1/1:3,25:27:78.16:1166,78,0	1/1:2,16:18:54.10:809,54,0	1/1:3,28:30:84.15:1306,84,0	1/1:1,18:18:48.08:735,48,0	1/1:2,17:19:54.17:840,54,0	1/1:4,14:18:51.16:777,51,0	1/1:0,35:35:78.18:1214,78,0	1/1:1,20:21:63.11:950,63,0	1/1:1,26:25:72.24:1138,72,0	1/1:4,12:16:42.06:607,42,0	1/1:2,22:23:69.23:1090,69,0	1/1:2,24:24:72.23:1127,72,0	1/1:0,24:24:60.12:925,60,0	1/1:1,10:8:21.07:334,21,0
chr10	28736208	.	CT	C	12944.63	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=3.325;DP=505;FS=9.322;HRun=2;HaplotypeScore=173.5801;InbreedingCoeff=0.8677;MQ=54.23;MQ0=0;MQRankSum=-7.265;QD=27.48;ReadPosRankSum=3.810;VQSLOD=3.5869;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,32:39:60.10:759,60,0	1/1:0,5:5:12.04:156,12,0	0/0:19,0:16:32.76:0,33,498	0/0:15,0:14:30.03:0,30,403	1/1:3,15:18:7.55:99,8,0	1/1:3,7:10:21.07:271,21,0	1/1:0,23:23:63.15:796,63,0	1/1:4,22:26:60.19:778,60,0	1/1:2,28:30:80.98:982,81,0	1/1:1,11:12:36.11:451,36,0	1/1:1,12:13:18.06:233,18,0	1/1:1,22:23:63.20:815,63,0	1/1:2,16:18:48.10:598,48,0	1/1:2,19:21:62.40:767,62,0	1/1:1,19:20:54.17:696,54,0	1/1:2,20:22:63.19:801,63,0	1/1:2,15:17:42.05:522,42,0	1/1:3,12:14:27.09:350,27,0	1/1:1,21:20:51.17:658,51,0	1/1:1,13:14:36.07:446,36,0	1/1:3,27:29:41.92:541,42,0	1/1:0,15:15:33.06:406,33,0	1/1:3,5:8:5.98:58,6,0	1/1:2,21:23:27.09:350,27,0	1/1:0,13:13:36.03:428,36,0	1/1:2,10:12:27.09:349,27,0	1/1:5,14:19:41.97:517,42,0	1/1:0,3:3:9.03:116,9,0
chr10	28736240	.	A	AT	20935	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-0.864;DP=543;FS=1.423;HRun=0;HaplotypeScore=120.7496;InbreedingCoeff=0.9748;MQ=63.54;MQ0=0;MQRankSum=-8.945;QD=41.37;ReadPosRankSum=3.707;VQSLOD=4.4209;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,46:46:99:1861,120,0	1/1:0,5:5:12.04:192,12,0	0/0:19,0:18:54.17:0,54,713	0/0:18,0:18:44.93:0,45,563	1/1:4,18:22:49.26:662,49,0	1/1:1,13:14:36.12:574,36,0	1/1:1,22:23:54.18:859,54,0	1/1:0,30:30:90.31:1437,90,0	1/1:2,21:23:66.11:970,66,0	1/1:1,13:14:42.14:668,42,0	1/1:1,16:17:48.08:734,48,0	1/1:1,32:33:90.31:1432,90,0	1/1:4,12:16:45.15:703,45,0	1/1:1,26:27:78.25:1220,78,0	1/1:1,25:26:66.23:1052,66,0	1/1:2,18:20:54.17:838,54,0	1/1:0,15:15:45.07:677,45,0	1/1:2,10:11:30.08:454,30,0	1/1:4,19:22:60.17:892,60,0	1/1:1,11:12:33.11:525,33,0	1/1:6,23:28:63.13:939,63,0	1/1:2,13:15:45.15:713,45,0	1/1:1,8:9:24.08:373,24,0	1/1:1,25:26:66.05:973,66,0	1/1:2,9:11:33.11:523,33,0	1/1:1,14:16:48.15:734,48,0	1/1:2,14:16:45.14:695,45,0	1/1:1,5:6:15.05:239,15,0
chr10	28736489	.	G	GATGAGAGC	25023.90	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-3.148;DP=426;FS=15.370;HRun=0;HaplotypeScore=126.2902;InbreedingCoeff=0.7401;MQ=73.18;MQ0=0;MQRankSum=-8.468;QD=65.17;ReadPosRankSum=3.602;VQSLOD=4.2927;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:12,6:19:27.09:1135,27,0	1/1:1,1:3:3.01:129,3,0	0/0:18,0:18:45.10:0,45,963	0/0:24,0:24:47.72:0,48,1161	1/1:2,1:4:0.10:0,0,0	1/1:12,6:19:27.09:1145,27,0	1/1:13,8:25:42.14:1576,42,0	1/1:13,10:23:66.18:2452,66,0	1/1:6,11:18:48.16:1992,48,0	1/1:6,5:15:39.13:1325,39,0	1/1:0,3:4:0.47:1,0,0	1/1:11,8:26:29.83:1253,30,0	1/1:7,4:17:20.88:800,21,0	1/1:8,13:25:30.10:1287,30,0	1/1:7,12:21:45.15:1852,45,0	1/1:3,8:13:30.10:1276,30,0	1/1:4,9:14:21.07:872,21,0	1/1:5,6:12:24.08:1019,24,0	1/1:10,0:9:27.09:829,27,0	1/1:4,5:12:9.42:387,9,0	1/1:18,9:30:18.05:711,18,0	1/1:4,3:9:9.03:375,9,0	1/1:0,5:7:9.03:379,9,0	1/1:6,8:19:24.08:949,24,0	1/1:3,4:8:15.05:608,15,0	1/1:3,2:6:15.05:401,15,0	1/1:4,10:15:45.15:1883,45,0	1/1:2,4:7:9.03:387,9,0
chr10	28737702	.	GAA	G	6675.90	PASS	AB=1.000;AC=48;AF=0.857;AN=56;BaseQRankSum=-2.366;DP=786;FS=6.567;HRun=3;HaplotypeScore=219.5828;InbreedingCoeff=0.6939;MQ=47.24;MQ0=42;MQRankSum=4.205;QD=11.11;ReadPosRankSum=-1.850;VQSLOD=0.4916;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:28:29.71:306,30,0	1/1:15,0:15:35.83:278,36,0	0/0:77,0:15:29.48:0,29,220	0/0:87,0:19:44.84:0,45,435	1/1:25,0:25:41.69:330,42,0	1/1:16,1:16:22.35:208,22,0	1/1:22,0:21:26:198,26,0	1/1:26,0:25:35.17:251,35,0	1/1:26,0:26:38.25:440,38,0	1/1:35,0:34:73.49:728,73,0	1/1:16,0:14:20.87:185,21,0	1/1:25,0:22:32.22:280,32,0	1/1:22,0:21:6.65:185,7,0	0/1:21,0:20:0.22:170,0,0	1/1:29,2:30:40.55:301,41,0	1/1:23,1:23:22.78:294,23,0	1/1:39,0:39:6.35:47,6,0	0/0:19,0:19:2.16:0,2,15	1/1:24,0:23:42.40:396,42,0	1/1:21,0:20:17.39:137,17,0	1/1:18,0:18:36.42:298,36,0	1/1:28,0:27:21.94:177,22,0	1/1:19,0:18:27.16:215,27,0	1/1:25,0:24:12.32:94,12,0	1/1:29,0:27:32.41:277,32,0	0/1:23,0:21:0.19:348,0,0	1/1:29,0:28:45.15:341,45,0	1/1:12,0:11:14.52:190,15,0
chr10	28737706	.	G	GAC	4048.37	PASS	AB=0.969;AC=27;AF=0.482;AN=56;BaseQRankSum=7.139;DP=788;FS=14.374;HRun=0;HaplotypeScore=216.8389;InbreedingCoeff=-0.6326;MQ=45.93;MQ0=42;MQRankSum=1.647;QD=6.92;ReadPosRankSum=4.931;VQSLOD=2.1006;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:27:77.72:78,0,105	0/1:14,0:14:29.30:131,0,29	0/0:81,0:13:10.16:0,10,136	0/0:97,0:15:36.23:0,36,358	0/1:25,1:26:78.81:90,0,79	0/1:16,0:15:59.27:132,0,59	0/1:22,0:21:37.78:108,0,38	0/1:29,0:28:99:106,0,143	0/1:25,0:25:87.72:230,0,88	0/1:35,0:34:99:244,0,251	0/1:15,1:14:55.79:88,0,56	0/1:23,0:20:39.44:39,0,160	0/1:23,0:22:57.21:155,0,57	0/1:19,0:18:18.42:134,0,18	1/1:31,0:30:16.37:393,16,0	0/1:18,3:20:69.05:193,0,69	1/1:3,35:40:31.14:700,31,0	0/1:3,17:20:4.54:374,0,5	0/1:24,0:23:99:123,0,165	0/1:21,0:20:45.59:46,0,101	0/1:17,0:17:84.89:135,0,85	0/1:27,1:27:26.41:26,0,82	0/1:17,0:16:55.73:72,0,56	0/0:13,11:23:11.92:0,12,91	0/1:28,0:26:44.22:115,0,44	0/1:25,0:24:77.51:161,0,78	0/1:26,0:25:53.53:166,0,54	0/1:11,0:10:12.76:13,0,100
chr10	28738052	.	CT	C	25118.89	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-0.843;DP=772;FS=11.483;HRun=2;HaplotypeScore=80.7243;InbreedingCoeff=0.9788;MQ=90.36;MQ0=0;MQRankSum=-12.427;QD=35.23;ReadPosRankSum=7.551;VQSLOD=3.7184;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,42:44:99:1636,126,0	1/1:1,11:12:33.11:428,33,0	0/0:32,0:32:93.29:0,93,1342	0/0:27,0:27:75.20:0,75,1046	1/1:0,13:13:17.89:233,18,0	1/1:0,22:22:57.19:740,57,0	1/1:0,33:33:96.31:1247,96,0	1/1:0,36:36:99:1302,105,0	1/1:0,24:24:69.22:896,69,0	1/1:0,31:31:90.28:1157,90,0	1/1:1,6:7:12.04:156,12,0	1/1:1,37:38:99:1286,99,0	1/1:0,30:30:84.27:1091,84,0	1/1:1,33:34:96.31:1247,96,0	1/1:0,29:29:81.26:1052,81,0	1/1:0,23:23:66.21:857,66,0	1/1:1,39:40:99:1441,111,0	1/1:0,26:26:75.24:974,75,0	1/1:2,22:24:72.22:905,72,0	1/1:1,18:19:45.15:584,45,0	1/1:2,88:90:99:3078,238,0	1/1:2,13:15:36.12:463,36,0	1/1:0,12:12:33.11:429,33,0	1/1:1,27:28:75.24:974,75,0	1/1:0,16:16:39.13:506,39,0	1/1:0,30:30:90.28:1154,90,0	1/1:0,27:27:75.24:974,75,0	1/1:0,10:10:24.08:312,24,0
chr10	28738212	.	A	AC	22946.17	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-3.744;DP=645;FS=3.637;HRun=3;HaplotypeScore=59.5100;InbreedingCoeff=0.9086;MQ=63.51;MQ0=0;MQRankSum=-4.217;QD=35.91;ReadPosRankSum=3.819;VQSLOD=5.4983;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,30:32:84.28:1176,84,0	1/1:0,11:11:30.10:420,30,0	0/0:4,0:4:12:0,12,119	0/0:2,0:2:6.02:0,6,71	1/1:3,22:25:57.18:780,57,0	1/1:2,19:21:42.13:572,42,0	1/1:0,35:35:96.32:1344,96,0	1/1:5,19:24:57.16:761,57,0	1/1:0,24:24:63.21:882,63,0	1/1:0,20:20:57.18:770,57,0	1/1:0,9:9:27.09:378,27,0	1/1:2,36:38:96.32:1344,96,0	1/1:2,27:29:77.90:1091,78,0	1/1:0,28:28:78.26:1092,78,0	1/1:0,22:22:57.19:798,57,0	1/1:3,16:19:45.15:626,45,0	1/1:1,34:35:96.32:1344,96,0	1/1:0,34:34:90.30:1260,90,0	1/1:0,15:15:42.14:588,42,0	1/1:2,6:8:15.05:204,15,0	1/1:2,63:65:99:2348,169,0	1/1:3,17:20:51.16:696,51,0	1/1:2,15:17:30.10:420,30,0	1/1:0,29:29:84.28:1176,84,0	1/1:2,19:21:48.16:671,48,0	1/1:0,29:29:84.25:1155,84,0	1/1:1,22:23:60.15:840,60,0	1/1:0,6:6:15.05:210,15,0
chr10	28738405	.	TG	T	20661.91	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-1.090;DP=615;FS=0.000;HRun=2;HaplotypeScore=64.2952;InbreedingCoeff=0.9431;MQ=66.60;MQ0=0;MQRankSum=-6.969;QD=35.62;ReadPosRankSum=5.534;VQSLOD=4.8917;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,46:46:99:1714,132,0	1/1:0,12:12:33.11:428,33,0	0/0:15,0:15:39.11:0,39,540	0/0:20,0:20:57.11:0,57,790	1/1:1,12:13:33.08:423,33,0	1/1:0,21:21:60.20:779,60,0	1/1:5,32:37:78.25:1013,78,0	1/1:1,29:30:84.27:1091,84,0	1/1:0,26:26:75.24:974,75,0	1/1:0,15:15:45.15:583,45,0	1/1:0,11:11:30.10:389,30,0	1/1:0,37:37:99:1321,102,0	1/1:1,28:29:75.24:973,75,0	1/1:0,31:31:90.25:1149,90,0	1/1:0,25:25:72.23:935,72,0	1/1:0,16:16:48.16:623,48,0	1/1:0,25:25:75.24:974,75,0	1/1:0,23:23:66.21:856,66,0	1/1:0,14:13:39.13:506,39,0	1/1:0,8:8:24.08:312,24,0	1/1:1,42:43:99:1597,123,0	1/1:0,11:11:33.11:428,33,0	1/1:0,17:17:48.16:623,48,0	1/1:1,23:24:46.23:798,46,0	1/1:3,5:8:18.06:227,18,0	1/1:1,25:26:75.24:974,75,0	1/1:2,25:27:69.22:895,69,0	1/1:0,5:5:6.02:78,6,0
chr10	28738583	.	C	CGACACACCGT	16980.32	PASS	AC=50;AF=0.926;AN=54;BaseQRankSum=-5.118;DP=389;FS=0.000;HRun=0;HaplotypeScore=120.9314;InbreedingCoeff=0.6357;MQ=73.33;MQ0=0;MQRankSum=-3.570;QD=48.79;ReadPosRankSum=3.188;VQSLOD=4.1546;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:21,5:23:18.06:696,18,0	1/1:3,1:4:3.01:152,3,0	0/0:19,0:18:17.20:0,17,404	0/0:19,0:18:14.37:0,14,275	1/1:5,6:13:20.31:1042,20,0	1/1:7,4:11:15.01:627,15,0	1/1:15,7:22:36.10:1484,36,0	1/1:17,0:18:15.03:400,15,0	1/1:6,5:11:18.06:808,18,0	1/1:11,4:15:21.07:887,21,0	1/1:1,5:6:12.04:606,12,0	1/1:10,9:19:21.07:1060,21,0	1/1:10,5:15:21.03:768,21,0	1/1:7,2:9:12.04:480,12,0	1/1:6,3:9:9.03:355,9,0	1/1:5,4:9:21.03:751,21,0	1/1:9,4:13:13.24:400,13,0	1/1:22,6:27:48.11:1777,48,0	1/1:11,1:12:20.97:430,21,0	1/1:7,1:9:3.01:144,3,0	1/1:30,2:32:11.78:605,12,0	1/1:6,1:7:8.99:198,9,0	1/1:4,0:4:3.01:50,3,0	1/1:11,11:22:27.08:1135,27,0	1/1:8,2:10:6.02:303,6,0	1/1:6,3:9:15.04:592,15,0	1/1:7,7:15:27.08:1231,27,0	./.
chr10	28738626	.	TGG	T	4581.26	PASS	AB=0.810;AC=47;AF=0.870;AN=54;BaseQRankSum=-3.435;DP=310;FS=11.285;HRun=12;HaplotypeScore=82.4692;InbreedingCoeff=0.5237;MQ=87.11;MQ0=1;MQRankSum=-4.764;QD=18.55;ReadPosRankSum=5.217;VQSLOD=2.8639;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,15:15:30.06:305,30,0	0/1:1,1:2:18.15:25,0,18	0/0:36,0:29:15.90:0,16,336	0/0:25,0:19:23.88:0,24,238	1/1:5,5:10:12.03:122,12,0	1/1:1,6:7:18.04:183,18,0	1/1:5,13:19:41.81:409,42,0	1/1:5,4:10:5.72:113,6,0	1/1:2,6:9:20.76:195,21,0	1/1:2,9:11:27.06:275,27,0	1/1:0,10:10:24.05:244,24,0	1/1:5,6:11:15.01:153,15,0	1/1:2,9:11:24.02:234,24,0	1/1:2,6:8:18.03:183,18,0	1/1:3,5:9:17.77:164,18,0	1/1:3,7:11:23.78:225,24,0	1/1:0,0:6:16.47:71,16,0	1/1:2,0:19:43.91:190,44,0	1/1:1,7:8:20.99:202,21,0	0/1:3,0:3:3.34:21,0,3	1/1:2,12:15:29.71:286,30,0	1/1:1,7:8:18.04:183,18,0	1/1:0,4:4:12.03:122,12,0	0/1:9,4:13:1.99:116,0,2	1/1:1,5:6:15.03:153,15,0	1/1:2,7:9:21.04:214,21,0	1/1:3,6:10:20.76:195,21,0	./.
chr10	28738708	.	T	TGGG	8279.98	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-1.990;DP=231;FS=20.534;HRun=6;HaplotypeScore=52.6571;InbreedingCoeff=0.7500;MQ=71.57;MQ0=0;MQRankSum=-4.542;QD=39.43;ReadPosRankSum=1.838;VQSLOD=2.5764;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,5:7:15.05:317,15,0	1/1:1,3:4:9.03:191,9,0	0/0:10,0:10:21.06:0,21,292	0/0:7,0:7:12.03:0,12,170	1/1:2,6:9:15.05:290,15,0	1/1:2,2:4:9.03:182,9,0	1/1:1,6:7:15.05:317,15,0	1/1:4,5:11:15.05:294,15,0	1/1:4,3:7:15.02:261,15,0	1/1:5,5:11:24.08:449,24,0	1/1:5,3:8:12.04:232,12,0	1/1:3,6:9:15.05:294,15,0	1/1:6,3:9:12.04:237,12,0	1/1:3,3:6:12.04:237,12,0	1/1:1,6:7:15.05:318,15,0	1/1:1,9:11:30.08:572,30,0	1/1:1,12:14:36.12:764,36,0	1/1:6,8:14:24.08:497,24,0	1/1:3,2:4:9.03:191,9,0	1/1:4,4:8:15.04:271,15,0	1/1:2,5:7:15.03:267,15,0	1/1:2,6:9:15.05:318,15,0	1/1:3,4:7:12.04:255,12,0	1/1:0,6:6:15.52:319,16,0	1/1:1,6:8:18.06:361,18,0	1/1:6,3:12:21.03:335,21,0	1/1:0,6:6:15.05:318,15,0	1/1:0,3:3:9.03:191,9,0
chr10	28738945	.	CA	C	5561.97	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=11.162;DP=367;FS=40.927;HRun=2;HaplotypeScore=259.5853;InbreedingCoeff=0.8568;MQ=95.41;MQ0=0;MQRankSum=-10.900;QD=17.88;ReadPosRankSum=8.332;VQSLOD=1.4031;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,20:24:59.16:374,59,0	1/1:1,4:5:11.87:79,12,0	0/0:31,0:31:90.16:0,90,1221	0/0:25,0:25:62.17:0,62,840	1/1:2,11:14:38.29:250,38,0	1/1:0,8:8:23.75:161,24,0	1/1:1,8:10:26.42:167,26,0	1/1:0,6:6:17.90:132,18,0	1/1:0,10:10:29.69:200,30,0	1/1:1,10:11:32.70:239,33,0	1/1:0,5:5:8.85:56,9,0	1/1:0,13:13:36.11:243,36,0	1/1:0,9:9:26.68:177,27,0	1/1:0,17:18:53.38:355,53,0	1/1:3,23:26:71.05:466,71,0	1/1:1,12:13:38.38:255,38,0	1/1:3,10:13:24.23:161,24,0	1/1:1,8:9:23.83:170,24,0	1/1:0,13:13:38.80:286,39,0	1/1:1,8:9:26.61:174,27,0	1/1:1,4:5:8.53:50,9,0	1/1:0,10:10:28.63:159,29,0	1/1:1,1:2:5.87:39,6,0	1/1:2,13:15:31.88:183,32,0	1/1:3,8:11:29.47:191,29,0	1/1:2,21:23:62.51:455,63,0	1/1:1,22:23:68.14:455,68,0	1/1:5,1:6:11.92:87,12,0
chr10	28738948	.	CCACAACAAAAAG	C	26677.11	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=10.263;DP=344;FS=41.551;HRun=0;HaplotypeScore=249.1476;InbreedingCoeff=0.8283;MQ=93.60;MQ0=0;MQRankSum=-10.253;QD=90.74;ReadPosRankSum=7.586;VQSLOD=2.8895;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,20:22:63.18:1851,63,0	1/1:0,4:4:12.04:398,12,0	0/0:29,0:29:84.25:0,84,4058	0/0:21,0:21:46.21:0,46,2426	1/1:1,11:12:33.11:1038,33,0	1/1:0,8:8:24.08:799,24,0	1/1:1,8:9:27.09:851,27,0	1/1:0,6:6:18.06:611,18,0	1/1:0,10:10:30.10:998,30,0	1/1:1,10:11:33.11:1058,33,0	1/1:0,5:5:12.04:358,12,0	1/1:0,13:13:39.13:1251,39,0	1/1:0,9:9:27.09:895,27,0	1/1:1,17:18:54.19:1786,54,0	1/1:2,23:25:75.23:2403,75,0	1/1:0,12:12:36.12:1159,36,0	1/1:2,10:12:30.08:886,30,0	1/1:0,8:8:24.08:736,24,0	1/1:0,13:13:39.13:1324,39,0	1/1:1,8:9:27.09:823,27,0	1/1:1,4:5:12.04:288,12,0	1/1:0,10:10:30.10:791,30,0	1/1:0,1:1:3.01:95,3,0	1/1:0,13:13:36.12:1056,36,0	1/1:1,8:9:27.09:785,27,0	1/1:2,21:23:66.18:2088,66,0	1/1:1,22:23:69.23:2220,69,0	1/1:3,1:4:6.02:130,6,0
chr10	28739491	.	AC	A	14038.67	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=0.043;DP=607;FS=9.715;HRun=6;HaplotypeScore=79.3542;InbreedingCoeff=0.9368;MQ=80.83;MQ0=0;MQRankSum=-7.228;QD=25.52;ReadPosRankSum=7.252;VQSLOD=4.0365;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,47:52:99:1088,102,0	1/1:1,5:6:18.05:193,18,0	0/0:32,1:32:61.92:0,62,944	0/0:24,0:23:44.74:0,45,569	1/1:1,18:19:51.07:524,51,0	1/1:0,14:14:39.10:419,39,0	1/1:4,24:28:57.14:613,57,0	1/1:7,21:28:60.10:620,60,0	1/1:2,8:10:5.21:236,5,0	1/1:2,17:19:51.12:543,51,0	1/1:3,16:19:50.86:525,51,0	1/1:7,14:21:39.10:419,39,0	1/1:2,16:18:39.10:419,39,0	1/1:4,20:24:54.10:562,54,0	1/1:2,22:24:60.15:644,60,0	1/1:2,18:20:54.14:580,54,0	1/1:2,19:21:48.12:516,48,0	1/1:1,20:21:51.13:548,51,0	1/1:5,16:21:48.11:515,48,0	1/1:1,15:16:45.08:472,45,0	1/1:2,33:35:84.21:903,84,0	1/1:0,14:14:33.08:354,33,0	1/1:2,15:17:39.10:418,39,0	1/1:0,26:26:72.18:774,72,0	1/1:1,18:19:54.14:580,54,0	1/1:0,21:21:57.14:608,57,0	1/1:0,21:21:50.70:547,51,0	1/1:1,15:16:39.10:419,39,0
chr10	28739667	.	G	GTC	1603.20	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.039;DP=536;FS=8.226;HRun=0;HaplotypeScore=140.6723;InbreedingCoeff=0.9929;MQ=82.36;MQ0=0;MQRankSum=-8.575;QD=36.44;ReadPosRankSum=-0.364;VQSLOD=4.9303;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,114,1577	0/0:10,0:10:24.05:0,24,313	0/0:21,0:19:48.15:0,48,654	0/0:14,0:14:27.91:0,28,417	0/0:17,0:17:45.15:0,45,629	0/0:13,0:13:36.12:0,36,502	0/0:20,0:20:57.19:0,57,797	0/0:17,0:17:39.13:0,39,546	0/0:15,0:15:42.14:0,42,587	0/0:10,0:10:30.10:0,30,420	0/0:14,0:14:39.13:0,39,546	0/0:17,0:17:51.17:0,51,714	0/0:20,0:20:54.17:0,54,739	0/0:18,0:18:54.18:0,54,756	0/0:20,0:20:57.19:0,57,797	0/0:14,0:14:39.13:0,39,546	1/1:5,15:20:39.13:700,39,0	1/1:3,21:24:57.20:1024,57,0	0/0:18,0:18:48.16:0,48,671	0/0:23,0:23:66.22:0,66,923	0/0:37,0:37:99:0,99,1326	0/0:12,0:12:24.08:0,24,336	0/0:16,0:16:45.15:0,45,624	0/0:22,0:22:63.21:0,63,882	0/0:28,0:28:75.25:0,75,1050	0/0:19,0:19:54.14:0,54,734	0/0:26,0:26:72.24:0,72,1008	0/0:7,0:7:18.06:0,18,252
chr10	28741991	.	G	GA	16709.41	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-7.702;DP=541;FS=1.169;HRun=5;HaplotypeScore=68.3692;InbreedingCoeff=0.9965;MQ=77.80;MQ0=0;MQRankSum=-5.408;QD=34.67;ReadPosRankSum=2.551;VQSLOD=5.2370;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,25:26:72.19:926,72,0	1/1:1,6:7:18.06:237,18,0	0/0:14,0:14:28.78:0,29,272	0/0:18,0:17:40.60:0,41,405	1/1:4,24:28:78.25:1016,78,0	1/1:2,25:27:78.25:1023,78,0	1/1:3,22:25:60.20:789,60,0	1/1:2,19:21:57.16:722,57,0	1/1:2,20:22:60.20:788,60,0	1/1:2,9:11:27.09:355,27,0	1/1:4,19:23:63.19:814,63,0	1/1:2,15:17:36.06:473,36,0	1/1:1,11:12:36.12:473,36,0	1/1:1,16:17:48.11:604,48,0	1/1:2,14:16:42.09:533,42,0	1/1:2,22:24:60.20:789,60,0	0/0:11,0:11:30.07:0,30,322	0/0:16,0:16:48.12:0,48,516	1/1:0,28:28:84.27:1104,84,0	1/1:3,25:28:84.27:1104,84,0	1/1:2,19:21:54.18:710,54,0	1/1:4,26:30:66.21:868,66,0	1/1:2,18:20:57.17:735,57,0	1/1:2,16:18:42.14:553,42,0	1/1:2,15:17:45.15:592,45,0	1/1:1,15:16:45.15:592,45,0	1/1:1,18:18:45.15:592,45,0	1/1:1,8:9:24.08:316,24,0
chr10	28744688	.	G	GA	11939.03	PASS	AB=0.579;AC=48;AF=0.857;AN=56;BaseQRankSum=-7.442;DP=627;FS=3.955;HRun=10;HaplotypeScore=73.9480;InbreedingCoeff=0.4711;MQ=67.30;MQ0=1;MQRankSum=-1.849;QD=20.03;ReadPosRankSum=3.309;VQSLOD=5.8839;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,21:30:19.45:419,19,0	0/1:2,7:9:3.70:142,0,4	0/0:13,0:10:13.85:0,14,92	0/0:18,0:17:27.54:0,28,218	1/1:8,21:31:56.77:558,57,0	1/1:0,28:28:72.18:768,72,0	1/1:5,16:22:23.31:438,23,0	1/1:11,26:38:10.10:699,10,0	1/1:9,19:28:20.47:423,20,0	1/1:6,23:30:65.96:668,66,0	1/1:8,8:16:30.69:296,31,0	1/1:3,15:18:42.11:447,42,0	0/1:4,10:14:18.91:226,0,19	1/1:2,13:16:35.96:366,36,0	1/1:5,12:17:20.34:365,20,0	1/1:1,11:12:33.08:352,33,0	1/1:3,22:27:21.26:580,21,0	1/1:2,24:26:66.17:704,66,0	0/1:7,14:23:1.06:407,0,1	0/1:3,8:11:0.24:199,0,0	1/1:4,12:17:7.60:321,8,0	1/1:4,21:26:57.86:590,58,0	1/1:9,19:29:41.90:418,42,0	1/1:4,24:28:22.89:655,23,0	1/1:4,15:19:30.55:321,31,0	1/1:5,20:27:24.33:613,24,0	1/1:9,23:32:4.85:463,5,0	1/1:2,19:22:29.36:502,29,0
chr10	28745038	.	CCATCATCAT	C	3146.98	PASS	AB=1.000;AC=35;AF=0.625;AN=56;BaseQRankSum=10.507;DP=514;FS=31.903;HRun=0;HaplotypeScore=244.3794;InbreedingCoeff=-0.2649;MQ=55.44;MQ0=6;MQRankSum=-4.388;QD=6.67;ReadPosRankSum=4.049;VQSLOD=1.1461;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:25:16.24:89,0,16	0/1:8,0:8:24.19:48,0,24	0/0:26,0:18:15.05:0,15,451	0/0:15,0:11:6.02:0,6,118	0/1:23,0:23:27.30:143,0,27	1/1:15,0:15:1.19:98,1,0	0/1:16,0:16:32.03:76,0,32	0/1:27,0:27:0.69:1,0,222	0/1:23,0:23:0.31:178,0,0	0/1:21,0:21:50.79:124,0,51	1/1:16,0:16:12.53:119,13,0	0/1:16,0:16:37.80:133,0,38	0/1:18,0:18:21.15:107,0,21	0/1:13,0:13:60.03:87,0,60	1/1:27,0:27:48.93:264,49,0	0/1:18,0:18:5.18:136,0,5	1/1:8,12:20:12.04:335,12,0	1/1:5,5:10:9.03:252,9,0	0/1:15,0:15:33.95:74,0,34	0/1:20,0:20:67.09:116,0,67	0/1:20,0:19:17.37:17,0,46	0/1:10,0:10:18.96:57,0,19	1/1:19,0:19:28.28:142,28,0	1/1:16,0:16:19.26:91,19,0	1/1:15,0:15:31.92:173,32,0	1/1:20,0:20:21.04:193,21,0	0/1:30,0:30:68.76:238,0,69	0/1:11,0:10:20.55:21,0,90
chr10	28745046	.	ATC	A	2988.21	PASS	AB=0.696;AC=25;AF=0.446;AN=56;BaseQRankSum=14.860;DP=507;FS=15.136;HRun=0;HaplotypeScore=187.1446;InbreedingCoeff=-0.7913;MQ=48.07;MQ0=8;MQRankSum=-10.794;QD=6.76;ReadPosRankSum=14.730;VQSLOD=-0.3442;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:19,8:27:95.77:96,0,177	0/1:5,4:9:50.53:51,0,51	0/0:23,0:13:34.65:0,35,472	0/0:18,0:11:28.63:0,29,397	0/1:12,12:24:98.51:209,0,99	0/1:6,8:14:31.98:114,0,32	0/1:14,5:19:98.92:99,0,114	0/0:22,2:24:28.04:0,28,307	0/1:7,14:21:27.17:238,0,27	0/1:11,9:21:99:171,0,99	0/1:7,10:17:65.88:123,0,66	0/1:4,11:15:12.10:182,0,12	0/1:8,10:18:99:116,0,102	0/1:7,9:16:93.36:93,0,189	0/1:12,17:29:99:230,0,104	0/1:6,11:17:68.40:155,0,68	0/1:19,0:19:19.96:20,0,62	0/1:9,0:9:7.64:8,0,136	0/1:10,6:16:71.90:72,0,171	0/1:6,10:16:72.88:137,0,73	0/1:16,2:17:41.09:41,0,113	0/1:6,5:11:33.71:76,0,34	0/1:8,9:17:28.33:132,0,28	0/1:7,10:17:78.27:78,0,89	0/1:4,11:15:26.99:163,0,27	0/1:6,13:19:31.13:204,0,31	0/1:10,18:28:51.82:317,0,52	0/1:8,2:9:20.24:20,0,79
chr10	28745049	.	ATCAT	A	6186.28	PASS	AB=0.700;AC=26;AF=0.464;AN=56;BaseQRankSum=15.272;DP=494;FS=15.191;HRun=0;HaplotypeScore=191.2788;InbreedingCoeff=-0.8666;MQ=45.24;MQ0=8;MQRankSum=-11.919;QD=13.54;ReadPosRankSum=14.380;VQSLOD=1.3116;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:20,8:28:99:198,0,270	0/1:5,4:9:51.89:126,0,52	0/0:22,0:12:35.90:0,36,582	0/0:15,0:8:24.06:0,24,402	0/1:11,12:23:99:348,0,109	0/1:6,8:14:33.83:245,0,34	0/1:13,5:18:99:210,0,118	0/1:22,2:24:36.94:37,0,304	0/1:6,14:20:40.36:427,0,40	0/1:12,9:21:99:295,0,114	0/1:7,10:17:63.66:263,0,64	0/1:3,11:14:35.37:315,0,35	0/1:6,10:16:99:241,0,118	0/1:7,9:16:99:189,0,126	0/1:11,17:28:87.26:506,0,87	0/1:5,11:16:48.22:310,0,48	0/1:18,0:18:27.73:72,0,28	0/1:9,0:9:44.24:44,0,127	0/1:11,6:17:99:152,0,141	0/1:5,10:15:91.23:277,0,91	0/1:18,2:19:29.55:30,0,134	0/1:4,5:9:54.50:126,0,54	0/1:8,9:17:45.85:269,0,46	0/1:8,10:18:44.03:194,0,44	0/1:4,11:15:41.45:314,0,41	0/1:6,13:19:39.15:384,0,39	0/1:9,18:27:99:569,0,103	0/1:7,2:8:45.04:45,0,121
chr10	28745895	.	TAAAG	T	19847.38	PASS	AB=0.550;AC=47;AF=0.839;AN=56;BaseQRankSum=7.539;DP=668;FS=8.335;HRun=0;HaplotypeScore=119.5404;InbreedingCoeff=0.8608;MQ=69.87;MQ0=3;MQRankSum=-3.490;QD=34.22;ReadPosRankSum=3.198;VQSLOD=4.5152;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,32:34:78.27:1322,78,0	1/1:1,6:7:12.04:204,12,0	0/0:19,0:18:33.09:0,33,697	0/0:15,0:15:27:0,27,489	1/1:13,22:34:63.10:978,63,0	1/1:8,14:22:33.07:529,33,0	0/1:2,9:11:7.57:427,0,8	1/1:14,28:42:81.19:1229,81,0	1/1:3,25:28:57.16:937,57,0	1/1:5,24:29:72.22:1168,72,0	1/1:2,19:21:54.01:792,54,0	1/1:7,24:31:60.21:1017,60,0	1/1:9,21:30:60.17:988,60,0	1/1:1,18:19:54.18:915,54,0	1/1:4,29:32:63.06:1038,63,0	1/1:2,25:27:66.23:1119,66,0	0/0:34,0:34:90.25:0,90,2078	0/0:20,0:20:47.76:0,48,955	1/1:5,17:22:51.16:824,51,0	1/1:8,24:32:69.13:1066,69,0	1/1:2,18:20:45.15:764,45,0	1/1:5,19:24:45.11:731,45,0	1/1:2,14:16:33.11:560,33,0	1/1:2,7:9:15.05:255,15,0	1/1:5,14:19:36.08:580,36,0	1/1:4,21:25:63.22:1063,63,0	1/1:5,29:33:72.25:1222,72,0	1/1:6,4:10:8.99:122,9,0
chr10	28746484	.	A	AATGT	27059.47	PASS	AB=0.601;AC=44;AF=0.786;AN=56;BaseQRankSum=-10.439;DP=699;FS=3.604;HRun=0;HaplotypeScore=94.8346;InbreedingCoeff=0.5567;MQ=66.57;MQ0=1;MQRankSum=-0.971;QD=45.25;ReadPosRankSum=3.880;VQSLOD=5.3684;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,24:39:66.23:1605,66,0	1/1:4,12:17:36.12:851,36,0	0/0:31,0:26:23.81:0,24,311	0/0:28,0:26:30.37:0,30,509	1/1:9,23:33:57.15:1282,57,0	0/1:6,11:17:15.86:697,0,16	0/1:9,13:26:9.84:835,0,10	1/1:15,11:28:36.09:703,36,0	1/1:2,16:21:39.13:948,39,0	1/1:5,24:32:81.24:1822,81,0	0/1:6,11:18:58.80:764,0,59	1/1:11,18:29:54.18:1304,54,0	0/1:4,8:13:15.83:679,0,16	1/1:5,17:22:51.18:1238,51,0	1/1:4,31:39:87.30:2117,87,0	1/1:4,19:26:51.18:1241,51,0	0/0:24,0:25:45.14:0,45,711	0/0:16,0:17:30.06:0,30,468	1/1:12,6:22:21.36:447,21,0	1/1:5,23:33:63.22:1516,63,0	1/1:4,15:20:42.14:1022,42,0	1/1:1,30:32:84.29:1969,84,0	1/1:5,19:27:48.08:1161,48,0	1/1:2,12:15:21.07:511,21,0	1/1:6,17:23:3.68:1120,4,0	1/1:8,18:27:57.18:1334,57,0	1/1:3,25:29:66.23:1605,66,0	1/1:4,3:7:12.04:291,12,0
chr10	28747098	.	AAAG	A	30044.34	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=8.828;DP=700;FS=0.832;HRun=0;HaplotypeScore=109.9369;InbreedingCoeff=0.9998;MQ=60.59;MQ0=2;MQRankSum=-5.320;QD=50.58;ReadPosRankSum=4.352;VQSLOD=6.9604;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,43:43:99:2010,108,0	1/1:0,13:13:30.10:559,30,0	0/0:29,0:24:72.24:0,72,1693	0/0:23,0:23:69.24:0,69,1687	1/1:0,23:23:60.21:1117,60,0	1/1:0,20:20:57.20:1062,57,0	1/1:0,27:27:75.26:1397,75,0	1/1:0,25:25:75.24:1353,75,0	1/1:0,14:14:42.14:783,42,0	1/1:0,25:25:75.24:1367,75,0	1/1:0,21:21:57.19:1040,57,0	1/1:0,30:30:81.28:1508,81,0	1/1:0,25:25:69.24:1279,69,0	1/1:0,27:27:72.25:1323,72,0	1/1:0,40:40:99:2068,111,0	1/1:0,27:27:72.25:1325,72,0	0/0:33,0:33:99:0,99,2377	0/0:21,0:21:63.22:0,63,1532	1/1:0,15:14:42.14:781,42,0	1/1:0,24:24:69.24:1285,69,0	1/1:0,42:42:99:1976,108,0	1/1:0,24:24:69.24:1280,69,0	1/1:0,18:18:54.19:1006,54,0	1/1:0,26:26:60.21:1118,60,0	1/1:0,23:23:60.21:1118,60,0	1/1:0,32:32:96.33:1780,96,0	1/1:0,17:17:48.16:894,48,0	1/1:0,13:13:33.11:615,33,0
chr10	28749330	.	CCTCTCTCTCTCTCTCTCTCTCTCTCTCT	C	12535.11	PASS	AB=0.773;AC=49;AF=0.875;AN=56;BaseQRankSum=3.077;DP=544;FS=2.547;HRun=0;HaplotypeScore=294.5487;InbreedingCoeff=0.1366;MQ=61.11;MQ0=12;MQRankSum=-3.070;QD=24.25;ReadPosRankSum=2.746;VQSLOD=3.4014;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:13,17:30:15.07:111,0,15	1/1:6,4:10:2.56:216,3,0	0/0:27,0:11:15.05:0,15,321	0/1:24,0:12:0.01:0,0,104	1/1:5,8:13:15.02:555,15,0	1/1:10,8:18:15.05:929,15,0	1/1:24,0:24:26.67:969,27,0	1/1:24,0:23:21.11:150,21,0	1/1:8,13:22:9.03:593,9,0	0/1:5,8:13:35:343,0,35	1/1:6,8:15:8.98:184,9,0	1/1:9,3:13:9.03:629,9,0	1/1:6,16:22:20.67:1164,21,0	1/1:13,11:24:9.03:505,9,0	1/1:9,21:30:10.86:1384,11,0	1/1:4,9:13:9.03:650,9,0	0/1:19,0:17:12.89:438,0,13	1/1:18,0:17:13.07:527,13,0	1/1:12,0:11:5.93:40,6,0	1/1:4,7:11:12.04:617,12,0	1/1:36,0:36:11.18:152,11,0	1/1:8,11:19:2.19:214,2,0	1/1:6,10:16:2.42:215,2,0	0/1:9,16:24:8.92:482,0,9	1/1:6,14:20:3.01:78,3,0	1/1:12,12:24:23.66:487,24,0	1/1:6,11:18:11.48:662,11,0	1/1:2,0:2:6.02:242,6,0
chr10	28749357	.	CT	C	559.25	PASS	AB=0.961;AC=37;AF=0.685;AN=54;BaseQRankSum=5.220;DP=328;FS=4.539;HRun=1;HaplotypeScore=112.0858;InbreedingCoeff=-0.1104;MQ=49.99;MQ0=32;MQRankSum=-2.277;QD=1.80;ReadPosRankSum=3.274;VQSLOD=-0.6400;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:19:0.99:5,1,0	1/1:4,0:4:2.22:8,2,0	0/0:10,0:2:6.02:0,6,76	0/1:11,0:3:1.93:2,0,32	1/1:8,0:8:7.33:39,7,0	0/1:11,0:10:8.22:17,0,8	0/1:13,0:12:5.32:42,0,5	0/0:4,0:2:1.51:0,2,35	1/1:16,0:15:4.91:15,5,0	0/1:9,0:9:31.85:32,0,35	0/1:9,0:9:7.24:17,0,7	1/1:5,0:4:6.66:21,7,0	0/1:19,0:19:13.37:13,0,29	1/1:15,0:14:1.21:9,1,0	0/1:23,0:22:4.50:22,0,5	0/1:12,0:10:5.58:12,0,6	0/1:10,4:12:75.72:76,0,95	0/1:9,6:14:70.19:120,0,70	./.	0/1:9,0:9:15.87:16,0,65	1/1:13,0:9:8.99:92,9,0	1/1:11,0:11:2.06:7,2,0	1/1:10,0:10:1.99:7,2,0	0/1:20,0:18:0.36:0,0,27	1/1:14,0:14:2.97:20,3,0	1/1:14,0:12:3.42:45,3,0	1/1:13,0:12:9.28:56,9,0	0/1:3,0:2:0:1,0,0
chr10	28749360	.	TCTCTCTCTCTCTCTC	T	4906.27	PASS	AB=1.000;AC=24;AF=0.429;AN=56;BaseQRankSum=10.969;DP=464;FS=35.606;HRun=0;HaplotypeScore=181.9588;InbreedingCoeff=-0.3862;MQ=47.45;MQ0=32;MQRankSum=-5.965;QD=13.12;ReadPosRankSum=10.199;VQSLOD=2.0155;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:26:18.60:19,0,141	0/1:8,0:8:87.31:87,0,101	0/0:11,0:2:6.02:0,6,85	0/0:9,0:3:1.61:0,2,45	0/1:10,0:10:28.22:191,0,28	0/1:18,0:17:99:376,0,125	0/1:22,0:21:86.94:87,0,198	0/0:11,0:8:24.08:0,24,302	0/1:20,0:19:94.99:244,0,95	0/1:17,0:17:3.49:3,0,374	0/0:14,0:14:4.93:0,5,63	0/1:11,0:10:60.33:283,0,60	0/1:23,0:23:98.32:430,0,98	0/1:19,0:18:95.04:202,0,95	0/1:28,0:27:83.10:546,0,83	0/1:23,0:21:99:268,0,234	1/1:13,4:15:24.41:562,24,0	1/1:11,6:16:29.80:714,30,0	0/0:7,0:3:9.03:0,9,113	0/1:14,0:14:99:185,0,199	0/0:17,0:13:11.86:0,12,148	0/1:19,0:19:67.01:90,0,67	0/1:11,0:11:31.94:93,0,32	0/1:33,0:31:88.19:137,0,88	0/0:20,0:20:5.10:0,5,74	0/1:19,0:17:34.73:35,0,268	0/1:16,0:15:99:277,0,106	1/1:3,0:2:6.02:77,6,0
chr10	28749375	.	C	CCT	419.25	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=4.881;DP=546;FS=3.159;HRun=0;HaplotypeScore=145.3142;InbreedingCoeff=0.8117;MQ=52.70;MQ0=23;MQRankSum=-3.977;QD=12.70;ReadPosRankSum=3.653;VQSLOD=3.7932;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:39.13:0,39,564	0/0:10,0:10:14.96:0,15,190	0/0:9,0:6:18.06:0,18,261	0/0:15,0:9:6.88:0,7,43	0/0:14,0:14:20.95:0,21,246	0/0:23,0:23:44.93:0,45,558	0/0:18,0:17:29.68:0,30,447	0/0:14,0:13:35.84:0,36,452	0/0:27,0:26:32.46:0,32,413	0/0:20,0:20:14.54:0,15,555	0/0:17,0:17:12.04:0,12,168	0/0:16,0:15:29.92:0,30,334	0/0:23,0:23:26.58:0,27,277	0/0:22,0:22:26.95:0,27,341	0/0:33,0:32:37.62:0,38,454	0/0:30,0:28:47.98:0,48,612	1/1:18,0:16:27.38:305,27,0	1/1:8,7:14:23.47:234,23,0	0/0:15,0:12:36.12:0,36,531	0/0:16,0:16:10.07:0,10,331	0/0:19,0:15:17.50:0,18,244	0/0:20,0:20:11.40:0,11,149	0/0:15,0:15:11.95:0,12,148	0/0:34,0:32:13.92:0,14,185	0/0:21,0:21:9.03:0,9,130	0/0:23,0:21:29.93:0,30,430	0/0:20,0:20:35.38:0,35,421	0/0:4,0:3:9.03:0,9,134
chr10	28750380	.	A	AGAC	31855.44	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-4.614;DP=545;FS=5.819;HRun=0;HaplotypeScore=88.7311;InbreedingCoeff=0.9858;MQ=82.06;MQ0=0;MQRankSum=-9.180;QD=62.71;ReadPosRankSum=5.085;VQSLOD=6.7352;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,43:45:99:2832,120,0	1/1:0,5:5:15.05:354,15,0	0/0:17,0:17:39.13:0,39,677	0/0:20,0:20:51.02:0,51,814	1/1:3,12:16:30.10:709,30,0	1/1:0,12:12:36.12:849,36,0	1/1:0,21:21:60.21:1414,60,0	1/1:12,17:31:90.25:1942,90,0	1/1:3,16:20:54.19:1263,54,0	1/1:2,15:19:51.17:1149,51,0	1/1:2,13:15:39.13:921,39,0	1/1:0,16:17:48.16:1133,48,0	1/1:0,14:14:42.14:990,42,0	1/1:2,14:17:45.15:1062,45,0	1/1:3,18:21:54.19:1275,54,0	1/1:3,14:17:42.14:991,42,0	1/1:3,37:40:99:2688,114,0	1/1:0,22:22:60.21:1418,60,0	1/1:7,10:18:54.16:1185,54,0	1/1:0,8:8:24.08:567,24,0	1/1:1,34:35:90.31:2124,90,0	1/1:2,14:17:42.14:986,42,0	1/1:0,15:15:45.15:1061,45,0	1/1:1,20:21:54.18:1274,54,0	1/1:1,10:11:27.09:637,27,0	1/1:1,16:18:51.18:1202,51,0	1/1:3,20:23:60.21:1404,60,0	1/1:2,6:8:18.06:426,18,0
chr10	28750597	.	GTGCT	G	19867.46	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=1.771;DP=543;FS=55.975;HRun=0;HaplotypeScore=125.4568;InbreedingCoeff=0.9799;MQ=85.93;MQ0=0;MQRankSum=-9.750;QD=39.66;ReadPosRankSum=6.512;VQSLOD=2.8130;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,38:41:84.29:1524,84,0	1/1:0,9:9:24.08:436,24,0	0/0:20,0:20:47.30:0,47,1176	0/0:22,0:22:57.13:0,57,1255	1/1:2,22:26:44.98:806,45,0	1/1:2,21:23:45.15:818,45,0	1/1:0,17:17:39.13:703,39,0	1/1:4,14:18:42.13:733,42,0	1/1:2,16:19:42.14:748,42,0	1/1:0,18:18:42.14:754,42,0	1/1:1,12:13:21.07:378,21,0	1/1:0,20:20:48.16:873,48,0	1/1:0,11:11:27.05:456,27,0	1/1:1,14:15:36.12:655,36,0	1/1:1,26:27:66.23:1200,66,0	1/1:1,20:21:54.19:982,54,0	1/1:2,26:29:69.24:1255,69,0	1/1:3,17:20:45.15:818,45,0	1/1:3,11:14:30.10:536,30,0	1/1:0,13:13:36.12:652,36,0	1/1:3,20:23:39.13:701,39,0	1/1:0,21:21:39.13:709,39,0	1/1:6,16:22:42.14:754,42,0	1/1:0,21:21:45.15:815,45,0	1/1:0,14:14:36.12:655,36,0	1/1:2,22:24:63.22:1143,63,0	1/1:1,13:14:30.10:545,30,0	1/1:1,7:8:12.04:218,12,0
chr10	28750599	.	GCTT	G	4720.39	PASS	AB=0.996;AC=35;AF=0.625;AN=56;BaseQRankSum=11.281;DP=532;FS=53.014;HRun=0;HaplotypeScore=164.1433;InbreedingCoeff=-0.3047;MQ=85.71;MQ0=0;MQRankSum=-6.041;QD=9.61;ReadPosRankSum=11.488;VQSLOD=1.1403;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:41,0:41:55.94:340,0,56	1/1:9,0:9:23.22:125,23,0	0/0:19,0:19:57.17:0,57,1244	0/0:21,0:22:60.19:0,60,1353	0/1:23,2:25:99:165,0,117	0/1:21,0:21:21.11:185,0,21	1/1:17,0:17:37.52:197,38,0	0/1:18,0:18:99:150,0,117	1/1:17,1:18:1.83:166,2,0	1/1:18,0:18:39.74:209,40,0	0/1:12,0:12:75.62:77,0,76	0/1:20,0:20:18.21:197,0,18	1/1:11,0:11:7.17:106,7,0	0/1:15,0:15:0.78:150,0,1	1/1:26,0:26:63.86:344,64,0	0/1:21,0:21:15.76:223,0,16	1/1:26,1:27:66.80:361,67,0	0/1:19,0:19:26.54:185,0,27	0/1:14,0:14:98.05:106,0,98	1/1:13,0:13:1.86:149,2,0	0/1:23,0:23:96.90:150,0,97	0/1:21,0:21:99:153,0,120	0/1:21,0:21:20.11:173,0,20	1/1:21,0:21:43.85:231,44,0	0/1:14,0:14:29.82:147,0,30	0/1:24,0:24:10.38:260,0,10	0/1:14,0:14:6.92:124,0,7	0/1:8,0:8:23.92:48,0,24
chr10	28750859	.	GGA	G	195.58	PASS	AB=0.933;AC=18;AF=0.346;AN=52;BaseQRankSum=3.156;DP=527;FS=3.648;HRun=0;HaplotypeScore=133.5021;InbreedingCoeff=-0.0937;MQ=68.05;MQ0=21;MQRankSum=0.496;QD=0.75;ReadPosRankSum=-0.332;VQSLOD=2.6134;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:27:18.01:0,18,180	0/0:10,0:10:3.01:0,3,40	0/0:36,0:17:0:0,0,0	0/0:51,0:19:0.47:0,0,1	1/1:14,0:14:3.01:32,3,0	0/1:18,0:16:23.11:23,0,60	0/1:26,0:27:10.33:10,0,70	0/0:31,0:31:6.02:0,6,73	1/1:10,3:13:3.01:33,3,0	0/1:17,0:16:24.87:25,0,112	0/0:8,0:7:3.48:0,3,41	0/0:19,0:19:20.90:0,21,275	0/1:17,1:16:14.88:15,0,143	0/0:20,0:21:1.77:0,2,100	0/1:16,2:18:20.38:20,0,111	0/0:17,0:16:6.02:0,6,88	1/1:9,0:14:8.52:42,9,0	1/1:14,0:22:2.73:14,3,0	0/0:14,0:14:12.04:0,12,169	0/1:10,3:13:26.62:27,0,35	0/1:13,2:14:17.41:17,0,104	0/1:15,0:15:33.06:45,0,33	0/0:5,0:4:3.85:0,4,22	0/1:31,1:32:13.46:13,0,320	./.	0/1:19,3:21:22.24:22,0,105	0/0:11,0:12:6.01:0,6,70	./.
chr10	28752440	.	A	AAATGG	5867.78	PASS	AB=0.970;AC=41;AF=0.732;AN=56;BaseQRankSum=5.070;DP=450;FS=127.087;HRun=0;HaplotypeScore=190.4784;InbreedingCoeff=0.1611;MQ=78.97;MQ0=3;MQRankSum=-10.214;QD=16.30;ReadPosRankSum=9.124;VQSLOD=1.7215;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:22,6:29:28.66:240,29,0	1/1:8,0:8:12.09:113,12,0	0/0:36,0:34:81.94:0,82,1405	0/0:50,0:40:78.94:0,79,1699	1/1:8,0:8:14.76:269,15,0	0/1:15,0:15:0.79:23,0,1	0/1:24,0:24:40.09:444,0,40	0/1:16,0:16:31.62:280,0,32	1/1:12,0:13:9.19:162,9,0	0/1:13,0:13:2.87:91,0,3	1/1:4,0:4:5.67:79,6,0	0/1:20,0:20:15.11:344,0,15	1/1:14,0:14:7.27:192,7,0	0/1:10,0:10:5.18:11,0,5	1/1:20,0:20:12.01:237,12,0	1/1:17,0:17:13.82:408,14,0	1/1:9,0:9:19.96:191,20,0	1/1:7,0:7:10.28:117,10,0	1/1:16,0:16:4.46:530,4,0	1/1:17,0:17:21.55:258,22,0	0/1:12,5:19:0.71:280,0,1	0/1:16,0:16:27.46:177,0,27	1/1:12,0:12:18.71:314,19,0	0/1:14,0:14:22.84:298,0,23	1/1:10,0:10:17.03:318,17,0	1/1:14,0:14:1.06:254,1,0	1/1:15,0:15:14.11:236,14,0	0/0:2,0:2:5.99:0,6,50
chr10	28752441	.	AGAGAAG	A	11831.72	PASS	AB=0.714;AC=51;AF=0.911;AN=56;BaseQRankSum=6.990;DP=446;FS=128.624;HRun=0;HaplotypeScore=170.9723;InbreedingCoeff=0.7356;MQ=80.77;MQ0=3;MQRankSum=-9.131;QD=33.24;ReadPosRankSum=9.030;VQSLOD=2.0369;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,16:26:12.14:659,12,0	1/1:3,5:8:21.04:298,21,0	0/0:38,0:34:98.36:0,98,2551	0/0:52,0:41:99:0,115,2825	1/1:2,6:8:24:289,24,0	1/1:2,13:15:21.16:622,21,0	1/1:12,12:24:36.99:809,37,0	1/1:9,8:17:19.33:429,19,0	1/1:4,9:13:33.09:469,33,0	1/1:6,8:14:13.84:418,14,0	1/1:0,4:4:12.03:171,12,0	1/1:9,12:21:15.77:638,16,0	1/1:3,11:14:35.12:553,35,0	1/1:2,8:10:16.97:385,17,0	1/1:4,16:20:36.11:777,36,0	1/1:7,10:17:26.88:545,27,0	1/1:3,6:9:27.05:377,27,0	1/1:3,4:7:15.97:241,16,0	1/1:9,7:16:40.38:622,40,0	1/1:3,15:18:31.67:655,32,0	0/1:9,6:15:0.24:219,0,0	1/1:5,9:14:26.53:490,27,0	1/1:0,12:12:36.09:496,36,0	1/1:6,7:13:5.49:295,5,0	1/1:5,5:10:23.98:318,24,0	1/1:7,7:14:21.09:433,21,0	1/1:4,11:15:26.65:617,27,0	1/1:2,0:2:3.11:8,3,0
chr10	28752448	.	A	AT	4931.38	PASS	AB=0.602;AC=50;AF=0.893;AN=56;BaseQRankSum=4.827;DP=465;FS=70.907;HRun=0;HaplotypeScore=162.2616;InbreedingCoeff=0.5654;MQ=84.76;MQ0=3;MQRankSum=-7.714;QD=13.19;ReadPosRankSum=7.100;VQSLOD=2.7661;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:14,16:30:45.34:379,45,0	1/1:2,5:7:20.51:139,21,0	0/0:38,0:34:99:0,101,1251	0/0:53,0:42:99:0,107,1381	0/1:2,6:8:4.04:81,0,4	1/1:3,13:16:32.24:258,32,0	1/1:12,12:24:36.32:309,36,0	1/1:13,8:21:35.16:258,35,0	1/1:7,8:15:30.56:213,31,0	1/1:6,8:14:27.87:236,28,0	1/1:2,4:6:9.38:79,9,0	1/1:9,12:21:18.66:216,19,0	1/1:4,11:15:22.08:220,22,0	1/1:1,8:9:21.30:157,21,0	1/1:9,16:25:53.98:402,54,0	1/1:5,10:15:12.66:186,13,0	1/1:1,6:7:10.42:111,10,0	1/1:3,4:7:13.13:98,13,0	1/1:8,7:15:11.68:176,12,0	1/1:3,15:18:31.86:253,32,0	1/1:11,6:17:7.86:138,8,0	1/1:4,9:13:24.17:175,24,0	1/1:3,12:15:22.18:163,22,0	0/1:5,7:12:21.90:79,0,22	1/1:5,5:10:17.79:152,18,0	1/1:10,7:17:22.33:198,22,0	1/1:4,11:15:30.28:236,30,0	1/1:2,0:2:5.19:20,5,0
chr10	28753715	.	G	GA	2327.60	PASS	AB=0.962;AC=47;AF=0.940;AN=50;BaseQRankSum=0.157;DP=218;FS=0.000;HRun=7;HaplotypeScore=55.1683;InbreedingCoeff=0.1799;MQ=31.13;MQ0=23;MQRankSum=-1.490;QD=12.38;ReadPosRankSum=3.081;VQSLOD=2.0063;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,8:6:9.02:98,9,0	./.	0/0:21,0:3:1.44:0,1,31	0/1:23,0:5:3.30:3,0,11	1/1:6,3:8:3.01:36,3,0	1/1:3,4:7:12.03:136,12,0	1/1:6,6:9:12.04:141,12,0	1/1:5,9:9:21.06:253,21,0	1/1:1,5:6:15.04:171,15,0	1/1:5,4:8:6.49:73,6,0	./.	1/1:2,8:7:12.03:138,12,0	1/1:0,1:1:3.01:33,3,0	1/1:1,2:2:3.01:32,3,0	1/1:1,6:6:9.03:102,9,0	1/1:2,5:7:12.03:138,12,0	1/1:4,4:8:14.63:147,15,0	1/1:4,4:7:11.98:127,12,0	1/1:2,2:3:3.01:36,3,0	1/1:6,2:8:5.95:72,6,0	1/1:2,7:8:12.04:144,12,0	1/1:0,3:1:3.01:32,3,0	1/1:4,3:6:6.02:69,6,0	./.	1/1:2,3:4:9.02:102,9,0	1/1:3,6:8:15.04:176,15,0	1/1:2,1:3:3.01:34,3,0	1/1:0,4:4:11.99:129,12,0
chr10	28753726	.	CCAAAAACAAAAA	C	4419.82	PASS	AB=0.821;AC=48;AF=0.889;AN=54;BaseQRankSum=-0.080;DP=221;FS=23.514;HRun=0;HaplotypeScore=70.2246;InbreedingCoeff=0.2642;MQ=41.33;MQ0=27;MQRankSum=-1.673;QD=28.51;ReadPosRankSum=3.603;VQSLOD=1.6884;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:6,4:6:15.05:425,15,0	./.	0/0:29,0:4:8.17:0,8,259	0/0:35,0:12:17.97:0,18,283	1/1:2,4:5:6.02:124,6,0	1/1:6,2:7:8.72:288,9,0	1/1:5,2:5:5.98:126,6,0	1/1:11,1:7:11.94:105,12,0	1/1:3,3:6:7.82:372,8,0	1/1:2,5:6:6.91:140,7,0	1/1:1,3:3:2.98:21,3,0	1/1:7,3:7:13.29:333,13,0	1/1:0,1:1:3.01:106,3,0	1/1:3,2:4:8.92:174,9,0	1/1:4,3:6:12:276,12,0	1/1:5,1:6:11.84:236,12,0	1/1:8,0:8:12.26:187,12,0	1/1:7,0:6:14.99:203,15,0	1/1:3,4:5:13.84:184,14,0	0/1:4,5:9:16.84:72,0,17	1/1:7,1:7:9.03:173,9,0	1/1:2,1:1:3.01:105,3,0	1/1:2,1:2:6.02:180,6,0	1/1:2,0:2:3.01:50,3,0	1/1:3,1:4:3.50:167,3,0	1/1:7,1:7:15.05:329,15,0	1/1:2,0:2:2.90:16,3,0	0/1:5,0:5:27.05:27,0,118
chr10	28753727	.	CAAAAACAAAAACA	C	3881.46	PASS	AB=0.978;AC=38;AF=0.704;AN=54;BaseQRankSum=0.696;DP=256;FS=38.345;HRun=0;HaplotypeScore=91.2507;InbreedingCoeff=0.0977;MQ=40.72;MQ0=28;MQRankSum=-1.772;QD=21.33;ReadPosRankSum=3.289;VQSLOD=0.1337;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:10,1:7:18.05:375,18,0	./.	0/0:31,0:5:11.21:0,11,307	0/0:36,0:12:17.35:0,17,281	1/1:6,0:5:6.02:83,6,0	0/1:12,0:11:10.39:299,0,10	1/1:9,0:6:8.98:128,9,0	1/1:14,0:9:20.97:217,21,0	1/1:6,0:6:0.84:266,1,0	1/1:7,0:6:7.27:88,7,0	0/0:4,0:3:1.82:0,2,5	0/1:14,1:12:8.12:324,0,8	1/1:4,0:4:11.06:173,11,0	0/1:6,0:5:7.62:94,0,8	1/1:7,0:6:11.91:197,12,0	1/1:6,1:7:2.31:231,2,0	0/1:9,0:9:22.62:95,0,23	0/1:9,0:8:11.32:133,0,11	0/1:7,1:6:2.60:101,0,3	0/1:10,0:10:28.97:29,0,36	1/1:9,0:8:9:127,9,0	1/1:3,0:1:3.01:79,3,0	1/1:3,1:3:9.03:203,9,0	1/1:3,0:3:6:80,6,0	1/1:8,0:7:17.91:234,18,0	1/1:9,1:8:17.99:298,18,0	0/0:2,0:2:2.04:0,2,6	0/1:5,0:5:26.96:27,0,162
chr10	28753730	.	AAACAAAAAC	A	4777.13	PASS	AB=1.000;AC=43;AF=0.796;AN=54;BaseQRankSum=-0.573;DP=264;FS=42.772;HRun=0;HaplotypeScore=77.0691;InbreedingCoeff=0.2189;MQ=43.51;MQ0=27;MQRankSum=-2.914;QD=25.41;ReadPosRankSum=3.043;VQSLOD=2.2762;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,0:8:4.30:308,4,0	./.	0/0:36,0:6:14.10:0,14,265	0/0:35,0:12:17.47:0,17,223	1/1:6,0:5:6.01:97,6,0	0/1:12,0:11:10.70:297,0,11	1/1:9,0:6:11.99:155,12,0	1/1:13,0:9:23.92:280,24,0	0/1:6,0:6:12.77:276,0,13	1/1:5,0:4:6.91:81,7,0	0/0:4,0:3:2.37:0,2,8	1/1:15,0:12:3.49:304,3,0	1/1:4,0:4:11.08:129,11,0	0/1:8,0:7:5.86:115,0,6	1/1:8,0:7:12:208,12,0	1/1:6,0:6:3.19:193,3,0	1/1:6,3:9:27.09:582,27,0	1/1:7,3:9:20.92:432,21,0	1/1:8,0:6:8.44:150,8,0	0/1:10,0:10:19.14:54,0,19	1/1:8,0:7:9.03:144,9,0	1/1:4,0:2:6.02:123,6,0	1/1:5,0:4:9.03:164,9,0	1/1:3,0:3:5.81:48,6,0	1/1:8,0:7:14.58:217,15,0	1/1:12,0:10:23.97:384,24,0	1/1:2,0:2:2.50:9,2,0	0/1:5,0:5:27.28:27,0,68
chr10	28753735	.	A	AG	650.62	PASS	AB=0.974;AC=30;AF=0.556;AN=54;BaseQRankSum=1.299;DP=280;FS=3.298;HRun=0;HaplotypeScore=75.8073;InbreedingCoeff=-0.0122;MQ=49.30;MQ0=24;MQRankSum=1.634;QD=3.74;ReadPosRankSum=1.020;VQSLOD=3.2542;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:11,1:8:10.44:79,10,0	./.	0/0:42,0:11:16.88:0,17,172	0/0:39,0:15:13.16:0,13,149	0/1:7,0:5:10.10:10,0,10	0/1:12,0:11:32.49:49,0,32	1/1:8,0:5:8.63:48,9,0	0/1:13,0:9:51.46:51,0,58	0/1:7,0:7:18.32:18,0,44	1/1:6,0:5:5.92:39,6,0	0/0:3,0:3:2.22:0,2,7	0/1:14,1:12:17.45:17,0,30	1/1:4,0:4:7.97:36,8,0	1/1:8,1:8:7.91:70,8,0	0/1:6,3:8:5.60:82,0,6	0/1:7,0:7:14.86:21,0,15	0/1:9,0:9:5.05:5,0,34	0/0:10,0:9:7.64:0,8,52	1/1:8,0:6:1.07:31,1,0	0/1:9,0:9:6.01:6,0,58	0/0:7,0:6:1.92:0,2,35	1/1:5,0:3:8.71:57,9,0	0/1:5,0:4:9.12:16,0,9	1/1:1,1:2:3.48:34,3,0	1/1:8,0:7:10.41:105,10,0	0/1:14,0:12:21.97:22,0,37	0/1:5,0:4:17.91:18,0,24	0/0:5,0:5:14.89:0,15,106
chr10	28753738	.	A	AC	917.74	PASS	AB=1.000;AC=34;AF=0.630;AN=54;BaseQRankSum=-1.571;DP=284;FS=2.337;HRun=1;HaplotypeScore=70.2431;InbreedingCoeff=-0.0580;MQ=51.98;MQ0=21;MQRankSum=2.557;QD=4.91;ReadPosRankSum=-0.656;VQSLOD=0.2281;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:12,0:9:0.85:65,0,1	./.	0/0:46,0:12:22.17:0,22,138	0/0:37,0:15:6.38:0,6,117	0/1:6,0:5:9.76:13,0,10	0/1:13,0:12:12.93:120,0,13	1/1:8,0:5:8.53:45,9,0	0/1:10,0:7:4.49:77,0,4	0/1:7,0:7:15.43:33,0,15	1/1:7,0:6:5.98:46,6,0	1/1:3,0:3:2.22:7,2,0	0/1:14,0:12:13.39:29,0,13	1/1:4,0:4:7.34:34,7,0	1/1:4,5:8:11.17:75,11,0	1/1:10,0:9:11.12:69,11,0	1/1:7,0:7:1.95:22,2,0	0/1:10,0:10:33.17:33,0,34	0/1:9,0:9:18.51:19,0,43	1/1:9,0:7:5.86:58,6,0	0/1:9,0:9:10.02:10,0,20	0/0:7,0:6:0.35:0,0,30	1/1:5,0:3:8.68:64,9,0	0/1:4,0:4:8.14:19,0,8	1/1:2,0:2:2.61:35,3,0	1/1:7,0:7:16.63:110,17,0	0/1:14,0:12:40.05:47,0,40	0/1:6,0:5:1.98:39,0,2	0/0:3,0:3:5.22:0,5,41
chr10	28754074	.	T	TC	2295.68	PASS	AB=0.840;AC=28;AF=0.609;AN=46;BaseQRankSum=4.358;DP=464;FS=9.063;HRun=1;HaplotypeScore=77.3992;InbreedingCoeff=-0.5652;MQ=28.22;MQ0=124;MQRankSum=-0.808;QD=5.89;ReadPosRankSum=0.579;VQSLOD=-0.1378;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:14,8:15:47.45:178,0,47	0/1:6,0:5:25.85:72,0,26	./.	0/0:31,0:5:8.83:0,9,72	1/1:2,7:6:3.01:40,3,0	1/1:4,6:6:3.01:39,3,0	0/1:30,0:23:55.48:215,0,55	0/1:21,0:15:38.12:295,0,38	0/1:11,2:9:7.08:103,0,7	0/1:13,1:9:51.88:202,0,52	./.	0/1:15,3:10:47.74:206,0,48	0/1:7,5:8:32.34:34,0,32	0/1:5,9:11:40.32:128,0,40	0/1:12,12:16:13.83:132,0,14	1/1:13,6:8:4.32:67,4,0	0/1:26,7:21:87.77:88,0,405	0/1:12,7:8:24.73:25,0,121	0/1:8,9:11:75.97:202,0,76	1/1:6,3:4:2.97:20,3,0	0/1:24,5:17:22.71:148,0,23	1/1:2,5:6:6.49:78,6,0	./.	1/1:16,13:19:5.46:29,5,0	./.	0/1:15,0:7:15.50:108,0,15	0/1:19,0:15:25.59:26,0,50	./.
chr10	28754079	.	C	CCCTCCTCTT	6907.70	PASS	AB=1.000;AC=48;AF=0.857;AN=56;BaseQRankSum=0.639;DP=469;FS=6.035;HRun=0;HaplotypeScore=82.0742;InbreedingCoeff=0.1814;MQ=31.52;MQ0=119;MQRankSum=-0.732;QD=16.57;ReadPosRankSum=-1.075;VQSLOD=2.4103;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:15:23.68:561,24,0	0/1:6,0:5:63.27:161,0,63	0/0:18,0:6:8.94:0,9,66	0/0:33,0:6:9.47:0,9,127	1/1:9,0:6:5.98:113,6,0	1/1:10,0:6:6.90:107,7,0	1/1:28,0:22:26.12:576,26,0	0/1:18,0:12:21.78:658,0,22	1/1:12,0:8:12.04:303,12,0	1/1:16,0:11:29.99:584,30,0	1/1:3,0:1:3:26,3,0	0/1:19,0:11:35.38:497,0,35	1/1:9,0:6:4.76:84,5,0	1/1:16,0:13:26.98:438,27,0	1/1:23,0:16:19.25:253,19,0	1/1:21,0:9:11.92:221,12,0	0/1:34,0:22:99:283,0,292	1/1:18,0:7:5.80:110,6,0	1/1:16,0:11:12.08:581,12,0	1/1:9,0:5:8.99:89,9,0	1/1:27,0:16:26.91:472,27,0	1/1:7,0:6:10.77:192,11,0	1/1:11,0:6:5.97:47,6,0	1/1:26,0:16:8.99:108,9,0	1/1:6,0:2:2.98:22,3,0	1/1:15,0:7:9.03:215,9,0	1/1:6,11:17:5.92:184,6,0	1/1:14,0:4:2.99:24,3,0
chr10	28754327	.	C	CAAA	6998.36	PASS	AB=1.000;AC=51;AF=0.911;AN=56;BaseQRankSum=-2.288;DP=358;FS=1.709;HRun=13;HaplotypeScore=118.2464;InbreedingCoeff=0.6254;MQ=63.12;MQ0=6;MQRankSum=-0.613;QD=23.02;ReadPosRankSum=-0.217;VQSLOD=3.7293;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,5:16:27.07:411,27,0	1/1:2,2:6:9.01:130,9,0	0/0:29,0:12:7.79:0,8,96	0/0:23,0:15:3.59:0,4,22	1/1:7,0:8:12.02:163,12,0	1/1:10,3:13:15.05:265,15,0	1/1:4,5:11:18.02:258,18,0	1/1:10,2:16:30.89:393,31,0	1/1:7,2:10:21.06:334,21,0	1/1:6,2:8:18.06:270,18,0	1/1:3,1:4:6.02:105,6,0	1/1:16,2:19:26.96:376,27,0	1/1:10,1:11:24.08:395,24,0	1/1:9,2:11:27.09:434,27,0	1/1:11,4:16:24.08:422,24,0	1/1:12,3:16:30.03:459,30,0	1/1:9,0:22:44.87:377,45,0	1/1:5,1:11:8.99:85,9,0	1/1:9,0:7:6.02:84,6,0	1/1:1,3:5:15:230,15,0	1/1:9,1:11:14.93:143,15,0	0/1:5,0:5:0:0,0,0	1/1:7,0:8:12.04:197,12,0	1/1:11,3:15:12.02:169,12,0	1/1:11,1:13:27.05:395,27,0	1/1:13,1:13:20.99:248,21,0	1/1:14,2:16:36.12:577,36,0	1/1:5,1:6:6.88:78,7,0
chr10	28755304	.	ACAC	A	164.23	PASS	AB=0.996;AC=9;AF=0.167;AN=54;BaseQRankSum=0.596;DP=616;FS=5.596;HRun=0;HaplotypeScore=80.1014;InbreedingCoeff=0.0174;MQ=28.62;MQ0=212;MQRankSum=-3.072;QD=0.78;ReadPosRankSum=-0.471;VQSLOD=1.1073;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:35,0:15:1.35:1,0,90	0/0:12,0:4:0.47:0,0,1	0/0:15,0:1:2.98:0,3,22	0/0:16,0:1:5.80:0,6,33	./.	0/0:19,0:9:3.65:0,4,27	0/0:27,0:11:5.92:0,6,102	0/0:15,0:3:7.58:0,8,115	0/0:27,0:16:9.22:0,9,112	0/1:31,0:15:96.45:96,0,233	0/0:10,0:5:3.01:0,3,38	0/0:27,2:15:5.49:0,5,35	0/0:20,1:15:8.51:0,9,82	0/1:32,1:15:25.16:43,0,25	1/1:23,0:10:5.03:32,5,0	0/0:18,0:5:0:0,0,0	0/0:19,0:8:8.97:0,9,79	0/0:15,0:10:5.67:0,6,114	0/1:19,0:9:54.79:55,0,170	0/0:14,0:8:2.60:0,3,11	0/0:79,0:38:8.35:0,8,145	0/0:12,0:5:2.75:0,3,19	0/0:7,0:5:0:0,0,0	0/1:37,0:24:0.34:1,0,0	0/0:30,0:18:5.37:0,5,18	0/1:22,0:11:21.41:21,0,118	0/1:11,0:6:8.68:30,0,9	0/0:5,0:4:2.12:0,2,50
chr10	28755317	.	ACACAC	A	137.40	PASS	AB=0.994;AC=12;AF=0.231;AN=52;BaseQRankSum=1.066;DP=828;FS=4.507;HRun=0;HaplotypeScore=116.5500;InbreedingCoeff=-0.0829;MQ=22.35;MQ0=303;MQRankSum=-2.252;QD=0.39;ReadPosRankSum=-3.101;VQSLOD=1.3567;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:42,1:20:2.91:3,0,163	1/1:15,0:6:0.46:1,0,0	./.	./.	0/0:17,1:11:2.97:0,3,20	0/0:25,0:11:7.53:0,8,94	0/0:39,0:15:11.71:0,12,260	0/0:23,0:3:9.02:0,9,164	0/1:33,0:16:3.11:3,0,277	0/1:44,0:20:92.46:92,0,382	0/0:14,0:7:3.01:0,3,89	0/0:34,1:19:11.90:0,12,142	0/0:29,0:19:9.24:0,9,159	0/1:42,1:21:27.98:28,0,89	1/1:36,1:17:4.92:33,5,0	0/0:26,0:11:2:0,2,33	0/0:30,0:13:18.05:0,18,335	0/1:28,0:18:22.34:22,0,357	0/1:21,0:9:2.19:2,0,287	0/0:21,0:10:5.69:0,6,75	0/0:105,0:53:14.18:0,14,260	0/0:18,0:7:2.82:0,3,45	0/0:15,0:8:3.01:0,3,33	0/1:50,0:34:14.63:27,0,15	0/0:42,0:21:13.78:0,14,179	0/1:30,0:14:47.98:48,0,188	0/0:11,0:5:7.89:0,8,62	0/0:9,0:4:4.26:0,4,39
chr10	28755320	.	CACCA	C	53.92	PASS	AB=0.983;AC=10;AF=0.192;AN=52;BaseQRankSum=2.104;DP=851;FS=16.895;HRun=0;HaplotypeScore=120.2869;InbreedingCoeff=0.1838;MQ=20.61;MQ0=324;MQRankSum=-1.884;QD=0.24;ReadPosRankSum=-1.020;VQSLOD=1.2428;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:20:20.10:0,20,215	0/0:16,0:6:0.88:0,1,2	./.	./.	0/0:21,0:12:1.87:0,2,29	0/0:25,0:11:9.76:0,10,86	0/0:39,1:16:11.71:0,12,226	0/1:24,0:3:6.41:6,0,80	0/0:35,1:18:12.17:0,12,224	0/1:47,0:20:40.18:40,0,382	0/0:12,1:6:3.01:0,3,76	0/0:36,1:19:6.82:0,7,54	0/0:27,0:18:7.96:0,8,109	0/1:43,2:22:4.76:5,0,66	1/1:39,0:17:3.95:13,4,0	1/1:25,0:11:2.13:5,2,0	0/0:30,0:13:18.06:0,18,365	0/0:29,0:19:18.26:0,18,588	0/0:22,0:9:20.37:0,20,313	0/0:23,0:9:6.02:0,6,71	0/0:105,0:53:14.66:0,15,218	0/0:20,0:7:3.01:0,3,39	0/0:16,0:8:3.01:0,3,37	0/0:52,0:35:5.48:0,5,26	0/0:42,0:20:9.62:0,10,140	0/1:35,1:16:84.48:84,0,133	1/1:11,0:5:4.23:18,4,0	0/0:9,0:3:5.81:0,6,67
chr10	28755322	.	CCA	C	37.48	PASS	AB=0.991;AC=9;AF=0.173;AN=52;BaseQRankSum=1.495;DP=880;FS=17.031;HRun=0;HaplotypeScore=119.0692;InbreedingCoeff=0.1058;MQ=20.38;MQ0=344;MQRankSum=-2.131;QD=0.20;ReadPosRankSum=-1.649;VQSLOD=1.1417;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:22:16.13:0,16,81	0/0:15,0:6:0.88:0,1,2	./.	./.	0/0:21,0:12:1.87:0,2,29	0/0:24,0:11:8.15:0,8,36	0/0:42,0:19:11.71:0,12,132	0/0:26,0:3:6.02:0,6,82	0/0:34,0:18:3.57:0,4,116	0/1:49,0:20:61.94:62,0,233	0/0:14,0:6:3.01:0,3,40	0/0:38,0:19:2.84:0,3,52	0/0:27,0:18:6.83:0,7,81	0/0:46,0:22:2.25:0,2,43	1/1:37,2:18:2.33:9,2,0	1/1:27,1:11:2.13:5,2,0	0/0:30,0:14:17.08:0,17,214	0/0:27,0:18:23.53:0,24,413	0/1:21,0:9:21.56:22,0,118	0/0:24,0:9:5.93:0,6,53	0/0:102,0:52:14.67:0,15,152	0/0:22,0:8:3.01:0,3,44	0/0:16,0:7:3.01:0,3,37	0/0:50,2:35:6.11:0,6,28	0/0:42,1:20:7.04:0,7,78	0/1:36,1:17:34.23:34,0,119	1/1:11,1:5:1.04:17,1,0	0/0:11,0:3:2.97:0,3,20
chr10	28755332	.	ACACAC	A	104.40	PASS	AB=1.000;AC=9;AF=0.173;AN=52;BaseQRankSum=3.088;DP=944;FS=9.215;HRun=0;HaplotypeScore=134.9817;InbreedingCoeff=-0.0625;MQ=20.28;MQ0=377;MQRankSum=-3.135;QD=0.33;ReadPosRankSum=-3.000;VQSLOD=1.1566;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:23:17.28:0,17,148	0/0:16,0:5:0.06:0,0,1	./.	./.	0/0:22,0:12:6.02:0,6,93	0/0:28,0:12:7.66:0,8,58	0/1:53,0:21:21.09:21,0,214	0/0:23,0:2:5.99:0,6,55	0/0:39,1:19:18.32:0,18,379	0/1:56,0:24:99:107,0,491	0/0:16,0:6:3.01:0,3,82	0/0:40,0:19:11.62:0,12,151	0/0:30,0:18:7.02:0,7,290	0/0:51,0:23:1.02:0,1,154	1/1:42,0:17:4.01:26,4,0	0/0:28,3:14:1.97:0,2,38	0/0:37,0:15:18.02:0,18,451	0/1:29,0:19:4.15:4,0,758	0/0:22,0:8:16.82:0,17,337	0/1:27,0:11:9.11:9,0,83	0/0:110,0:55:14.53:0,15,304	0/0:25,0:10:3.90:0,4,93	0/0:16,1:7:3.90:0,4,79	0/1:54,0:38:3.62:4,0,58	0/0:47,0:23:0.99:0,1,118	0/1:41,0:17:46.92:47,0,336	0/0:14,0:7:9.46:0,9,109	0/1:16,0:5:0.23:0,0,31
chr10	28755335	.	CACCA	C	149.29	PASS	AB=0.977;AC=9;AF=0.173;AN=52;BaseQRankSum=1.846;DP=943;FS=13.846;HRun=0;HaplotypeScore=135.0418;InbreedingCoeff=-0.1060;MQ=20.36;MQ0=375;MQRankSum=-4.013;QD=0.45;ReadPosRankSum=-1.780;VQSLOD=1.7019;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:23:29.17:0,29,242	0/0:16,0:4:1.55:0,2,4	./.	./.	0/0:22,0:11:6.01:0,6,62	0/1:28,0:12:5.68:6,0,61	0/1:50,2:21:3.50:3,0,169	0/0:23,0:2:6.02:0,6,81	0/0:40,0:19:6.39:0,6,285	0/1:52,2:24:99:146,0,497	0/0:16,0:6:3.01:0,3,85	0/1:36,2:19:19.68:20,0,111	0/0:29,1:18:20.72:0,21,255	0/1:51,0:24:4.49:4,0,174	1/1:37,2:16:1.16:3,1,0	0/0:31,0:14:2.03:0,2,22	0/0:38,0:16:18.06:0,18,420	0/0:31,0:20:29.82:0,30,856	0/0:23,0:7:13.29:0,13,255	0/0:27,0:11:5.89:0,6,90	0/0:109,0:56:14.87:0,15,299	0/1:27,0:10:9.12:9,0,68	0/0:17,1:8:3.01:0,3,44	0/0:54,1:38:9.87:0,10,81	0/0:48,0:23:12.01:0,12,126	0/1:43,0:18:69.16:69,0,294	0/0:14,0:7:6.16:0,6,59	0/0:16,0:5:5.98:0,6,67
chr10	28755351	.	AC	A	246.90	PASS	AB=0.954;AC=10;AF=0.192;AN=52;BaseQRankSum=1.369;DP=1014;FS=4.340;HRun=2;HaplotypeScore=140.4414;InbreedingCoeff=-0.1165;MQ=20.93;MQ0=401;MQRankSum=-1.278;QD=0.65;ReadPosRankSum=-0.054;VQSLOD=-0.7530;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:50,2:27:17.84:18,0,174	0/0:20,1:9:0.66:0,1,1	./.	./.	0/0:24,0:13:6.02:0,6,85	0/0:28,2:13:11.91:0,12,104	0/0:65,1:26:10.88:0,11,120	0/0:27,0:5:15.01:0,15,166	0/0:41,0:20:16.24:0,16,193	0/1:46,6:25:99:178,0,349	0/0:17,1:9:3.48:0,3,45	0/0:38,1:19:5.17:0,5,119	0/0:32,1:20:18.91:0,19,237	0/0:55,0:25:12.14:0,12,97	1/1:37,1:13:2.02:8,2,0	0/0:33,1:16:3.57:0,4,46	0/0:39,0:17:21.07:0,21,284	0/1:30,1:21:30.40:30,0,237	0/0:25,0:10:24.05:0,24,322	0/1:27,2:14:7.03:7,0,44	0/0:113,3:64:17.17:0,17,214	0/0:33,0:15:3.16:0,3,38	0/0:21,0:11:3.88:0,4,46	0/1:59,0:40:15.43:15,0,71	0/1:44,2:21:3.17:3,0,45	0/1:45,5:23:94.82:95,0,389	0/1:20,0:9:16.56:17,0,88	0/0:15,0:5:6.02:0,6,85
chr10	28756494	.	A	AG	1315.84	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.793;DP=622;FS=2.067;HRun=0;HaplotypeScore=71.3346;InbreedingCoeff=0.9785;MQ=70.60;MQ0=4;MQRankSum=-1.091;QD=26.85;ReadPosRankSum=3.186;VQSLOD=4.1029;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:55:99:0,144,1790	0/0:4,0:4:11.86:0,12,124	0/0:18,0:12:28.15:0,28,298	0/0:13,0:8:17.97:0,18,183	0/0:28,0:28:78.17:0,78,1009	0/0:17,0:17:44.96:0,45,566	0/0:35,0:35:99:0,102,1287	0/0:27,0:27:69.70:0,70,901	0/0:14,0:14:39.10:0,39,500	0/0:32,0:32:96.29:0,96,1261	0/0:16,0:16:45.12:0,45,578	0/0:26,0:26:75.21:0,75,1012	0/0:25,0:25:60.17:0,60,774	0/0:21,0:21:60.18:0,60,801	0/0:21,0:21:57:0,57,726	0/0:14,0:14:42.13:0,42,561	1/1:4,26:30:61.90:818,62,0	1/1:2,17:19:47.88:619,48,0	0/0:31,0:31:93.24:0,93,1205	0/0:16,0:15:32.18:0,32,532	0/0:19,0:18:53.96:0,54,705	0/0:14,0:14:39.05:0,39,450	0/0:20,0:20:59.99:0,60,739	0/0:29,0:29:84.20:0,84,1030	0/0:15,0:15:30.67:0,31,476	0/0:30,0:30:90.28:0,90,1201	0/0:21,0:21:63.19:0,63,843	0/0:11,0:10:30.09:0,30,399
chr10	28756940	.	CCGAA	C	530.12	PASS	AB=0.599;AC=2;AF=0.036;AN=56;BaseQRankSum=6.487;DP=628;FS=2.003;HRun=0;HaplotypeScore=111.5449;InbreedingCoeff=-0.0375;MQ=81.39;MQ0=0;MQRankSum=-6.865;QD=16.06;ReadPosRankSum=2.315;VQSLOD=3.0119;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,144,4074	0/0:11,0:11:33.11:0,33,954	0/0:18,0:18:51.17:0,51,1368	0/0:21,0:21:57.17:0,57,1582	0/0:18,0:18:54.13:0,54,1392	0/0:18,0:18:51.18:0,51,1471	0/0:29,0:29:87.30:0,87,2520	0/0:35,0:35:99:0,102,2735	0/0:23,0:23:69.24:0,69,1970	0/0:30,0:30:90.31:0,90,2601	0/0:8,0:8:24.08:0,24,695	0/0:22,0:22:66.23:0,66,1911	0/0:15,0:15:45.09:0,45,1067	0/0:27,0:27:81.26:0,81,2240	0/0:22,0:22:66.21:0,66,1848	0/0:19,0:19:57.18:0,57,1585	0/1:8,10:17:37.82:238,0,38	0/1:3,12:15:42.59:381,0,43	0/0:18,0:18:54.11:0,54,1430	0/0:27,0:27:78.27:0,78,2204	0/0:51,0:51:99:0,150,4137	0/0:17,0:17:51.18:0,51,1451	0/0:20,0:20:60.20:0,60,1610	0/0:23,0:23:66.16:0,66,1842	0/0:21,0:21:63.21:0,63,1726	0/0:21,0:21:63.17:0,63,1741	0/0:27,0:27:81.28:0,81,2336	0/0:5,0:5:15.05:0,15,434
chr10	28756945	.	TGGGGTA	T	764.71	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.543;DP=622;FS=1.870;HRun=0;HaplotypeScore=135.5572;InbreedingCoeff=0.9896;MQ=82.80;MQ0=0;MQRankSum=-6.812;QD=31.86;ReadPosRankSum=1.421;VQSLOD=3.6732;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,144,5262	0/0:12,0:12:33.11:0,33,1210	0/0:21,0:21:30.42:0,30,1842	0/0:22,0:22:60.21:0,60,2185	0/0:18,0:18:54.19:0,54,1907	0/0:21,0:21:57.18:0,57,1951	0/0:30,0:30:84.29:0,84,2992	0/0:32,0:32:96.33:0,96,3301	0/0:24,0:24:72.25:0,72,2553	0/0:33,0:33:96.33:0,96,3338	0/0:9,0:9:27.09:0,27,975	0/0:25,0:25:75.26:0,75,2748	0/0:13,0:13:39.13:0,39,1329	0/0:26,0:26:78.27:0,78,2857	0/0:22,0:22:66.22:0,66,2258	0/0:18,0:18:54.19:0,54,1900	1/1:0,10:11:23.40:343,23,0	1/1:0,12:12:32.78:543,33,0	0/0:16,0:16:45.15:0,45,1505	0/0:27,0:27:78.24:0,78,2665	0/0:49,0:49:99:0,144,5239	0/0:16,0:16:48.16:0,48,1758	0/0:18,0:18:54.19:0,54,1913	0/0:23,0:23:66.23:0,66,2394	0/0:21,0:21:63.22:0,63,2285	0/0:20,0:20:60.21:0,60,2106	0/0:28,0:28:84.27:0,84,2908	0/0:5,0:5:15.04:0,15,464
chr10	28757502	.	C	CTTTATTTA	5625.05	PASS	AC=38;AF=0.905;AN=42;BaseQRankSum=-4.850;DP=328;FS=0.000;HRun=0;HaplotypeScore=79.4441;InbreedingCoeff=0.4742;MQ=63.21;MQ0=2;MQRankSum=0.334;QD=22.15;ReadPosRankSum=-0.155;VQSLOD=3.8574;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:17:14.91:363,15,0	1/1:4,2:7:3.01:122,3,0	./.	./.	1/1:13,0:13:6.02:177,6,0	1/1:15,0:19:24.08:835,24,0	./.	1/1:37,0:37:30.05:665,30,0	1/1:6,0:6:9.03:329,9,0	1/1:14,0:14:9.03:242,9,0	1/1:8,0:8:3.01:121,3,0	1/1:9,0:9:11.96:248,12,0	1/1:5,6:11:15.05:584,15,0	1/1:8,0:8:5.95:62,6,0	./.	./.	0/0:7,0:17:18.06:0,18,314	0/0:11,0:19:9.03:0,9,151	1/1:17,0:20:15.04:443,15,0	1/1:7,0:9:3.01:104,3,0	1/1:3,0:3:2.94:18,3,0	./.	1/1:11,1:12:3.01:122,3,0	./.	1/1:6,4:11:12.04:471,12,0	1/1:10,3:14:14.96:303,15,0	1/1:9,4:15:9.03:367,9,0	1/1:14,0:20:5.99:49,6,0
chr10	28758040	.	A	AG	2036.13	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-8.808;DP=633;FS=1.202;HRun=0;HaplotypeScore=58.3094;InbreedingCoeff=0.9993;MQ=88.72;MQ0=0;MQRankSum=-4.959;QD=42.42;ReadPosRankSum=1.701;VQSLOD=4.2530;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:63.21:0,63,881	0/0:11,0:11:33.11:0,33,462	0/0:24,0:24:72.23:0,72,972	0/0:23,0:23:63.18:0,63,857	0/0:24,0:24:72.23:0,72,988	0/0:24,0:24:72.24:0,72,997	0/0:17,0:17:51.16:0,51,696	0/0:38,0:38:99:0,105,1468	0/0:23,0:23:66.22:0,66,922	0/0:27,0:27:81.27:0,81,1120	0/0:22,0:22:66.20:0,66,905	0/0:17,0:17:51.16:0,51,696	0/0:19,0:19:57.19:0,57,796	0/0:21,0:21:63.20:0,63,863	0/0:25,0:25:75.25:0,75,1049	0/0:14,0:14:42.13:0,42,569	1/1:0,16:16:45.15:719,45,0	1/1:1,31:32:90.31:1439,90,0	0/0:28,0:28:84.28:0,84,1160	0/0:28,0:28:84.27:0,84,1156	0/0:28,0:28:84.26:0,84,1156	0/0:17,0:17:51.17:0,51,712	0/0:19,0:19:57.18:0,57,780	0/0:21,0:21:63.14:0,63,821	0/0:25,0:25:75.23:0,75,1030	0/0:29,0:29:81.26:0,81,1117	0/0:31,0:31:93.24:0,93,1244	0/0:9,0:9:27.09:0,27,378
chr10	28759106	.	GAA	G	7175.91	PASS	AB=0.640;AC=48;AF=0.857;AN=56;BaseQRankSum=-0.319;DP=598;FS=18.056;HRun=15;HaplotypeScore=111.9871;InbreedingCoeff=0.1117;MQ=73.66;MQ0=0;MQRankSum=-0.656;QD=12.33;ReadPosRankSum=5.097;VQSLOD=2.1225;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,33:44:38.04:534,38,0	1/1:1,9:10:20.97:185,21,0	0/1:11,0:11:10.74:11,0,35	0/0:16,0:15:9.06:0,9,107	1/1:6,22:30:23.30:357,23,0	0/1:3,15:20:5.20:284,0,5	1/1:2,13:16:26.70:223,27,0	1/1:12,15:30:28.14:322,28,0	1/1:8,6:18:15.79:151,16,0	1/1:6,20:28:53.51:504,54,0	0/1:2,8:13:43.29:105,0,43	1/1:1,13:16:35.47:293,35,0	1/1:3,13:16:38.89:342,39,0	0/1:9,15:24:22.51:270,0,23	1/1:6,20:29:25.10:412,25,0	1/1:4,10:15:20.57:215,21,0	1/1:2,0:23:49.39:212,49,0	1/1:2,0:18:41.14:177,41,0	0/1:9,14:24:18.83:275,0,19	1/1:8,17:28:11.34:361,11,0	1/1:8,15:29:19.35:250,19,0	0/1:7,11:20:45.74:185,0,46	1/1:7,10:18:21.53:193,22,0	1/1:4,8:14:26.13:193,26,0	1/1:4,18:24:53.37:446,53,0	1/1:8,17:25:20.87:345,21,0	1/1:11,14:28:8.05:197,8,0	1/1:3,5:10:11.50:135,11,0
chr10	28761382	.	T	TA	794.28	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.803;DP=434;FS=0.815;HRun=3;HaplotypeScore=44.1984;InbreedingCoeff=0.8958;MQ=71.34;MQ0=1;MQRankSum=-1.496;QD=31.77;ReadPosRankSum=0.603;VQSLOD=3.2138;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:48.15:0,48,576	0/0:10,0:10:26.96:0,27,324	0/0:12,0:11:24.07:0,24,287	0/0:5,0:3:6.02:0,6,72	0/0:27,0:27:81.25:0,81,972	0/0:17,0:17:36.09:0,36,420	0/0:12,0:12:30.09:0,30,360	0/0:24,0:24:72.20:0,72,844	0/0:12,0:12:33.09:0,33,384	0/0:23,0:23:66.19:0,66,782	0/0:16,0:16:48.15:0,48,576	0/0:9,0:9:27.08:0,27,324	0/0:15,0:15:45.13:0,45,530	0/0:15,0:15:45.14:0,45,540	0/0:18,0:18:51.16:0,51,612	0/0:10,0:10:21.06:0,21,252	1/1:0,14:14:33.11:454,33,0	1/1:0,11:10:33.11:462,33,0	0/0:19,0:19:45.14:0,45,540	0/0:22,0:22:63.19:0,63,755	0/0:2,0:2:6.02:0,6,72	0/0:9,0:9:27.08:0,27,324	0/0:13,0:13:39.11:0,39,456	0/0:9,0:9:24.07:0,24,288	0/0:30,0:30:81.24:0,81,961	0/0:16,0:16:48.15:0,48,575	0/0:26,0:26:78.24:0,78,936	0/0:19,0:19:57.17:0,57,683
chr10	28763796	.	ATG	A	406.67	PASS	AB=0.643;AC=3;AF=0.054;AN=56;BaseQRankSum=6.915;DP=1324;FS=3.359;HRun=0;HaplotypeScore=176.6784;InbreedingCoeff=0.6048;MQ=57.18;MQ0=7;MQRankSum=-6.846;QD=12.71;ReadPosRankSum=-0.479;VQSLOD=3.4346;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:63,0:63:99:0,158,2697	0/0:17,0:17:48.16:0,48,831	0/0:52,0:33:75.24:0,75,1228	0/0:59,0:26:63.48:0,63,924	0/0:33,0:33:99:0,99,1701	0/0:23,0:23:62.63:0,63,1021	0/0:45,0:44:99:0,116,1923	0/0:40,0:40:81.83:0,82,1541	0/0:59,0:59:99:0,163,2744	0/0:60,0:60:99:0,172,2831	0/0:19,0:19:57.17:0,57,949	0/0:45,0:45:99:0,123,2124	0/0:59,0:59:99:0,154,2621	0/0:66,0:66:99:0,184,3152	0/0:77,0:77:99:0,217,3638	0/0:57,0:57:99:0,160,2736	0/1:8,10:18:25.64:272,0,26	1/1:10,4:14:9.90:232,10,0	0/0:27,0:26:72.25:0,72,1242	0/0:49,0:49:99:0,138,2376	0/0:150,0:150:99:0,406,6843	0/0:34,0:34:93.32:0,93,1602	0/0:37,0:37:99:0,102,1699	0/0:46,0:45:99:0,114,1911	0/0:39,0:39:93.31:0,93,1587	0/0:73,0:73:99:0,205,3458	0/0:35,0:35:90.27:0,90,1495	0/0:25,0:25:63.22:0,63,1080
chr10	28763836	.	GTGT	G	247.29	PASS	AB=0.766;AC=2;AF=0.036;AN=56;BaseQRankSum=4.685;DP=1396;FS=1.339;HRun=0;HaplotypeScore=206.4327;InbreedingCoeff=-0.0370;MQ=55.55;MQ0=28;MQRankSum=-4.656;QD=5.89;ReadPosRankSum=-3.307;VQSLOD=2.6274;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:62,0:61:99:0,149,3417	0/0:16,0:16:45.15:0,45,1092	0/0:69,0:27:76.96:0,77,1570	0/0:73,0:31:83.73:0,84,1751	0/0:34,0:34:99:0,99,2405	0/0:27,0:27:77.72:0,78,1782	0/0:35,0:34:90.77:0,91,2111	0/0:52,0:51:99:0,151,3488	0/0:63,0:63:99:0,181,4282	0/0:82,0:81:99:0,244,5757	0/0:34,0:34:99:0,102,2428	0/0:51,0:51:99:0,144,3433	0/0:71,0:71:99:0,214,5161	0/0:60,0:60:99:0,181,4351	0/0:59,0:59:99:0,175,4145	0/0:63,0:63:99:0,181,4203	0/1:15,8:22:99:219,0,397	0/1:13,5:17:99:117,0,344	0/0:39,0:32:93.32:0,93,2117	0/0:44,0:44:99:0,126,2994	0/0:140,0:139:99:0,406,9706	0/0:38,0:38:99:0,114,2729	0/0:36,0:36:99:0,105,2571	0/0:54,0:53:99:0,141,3368	0/0:38,0:38:99:0,102,2459	0/0:67,0:66:99:0,193,4649	0/0:30,0:29:90.31:0,90,2110	0/0:17,0:17:51.18:0,51,1246
chr10	28764388	.	GAAGA	G	756.26	PASS	AB=0.911;AC=27;AF=0.482;AN=56;BaseQRankSum=-3.561;DP=582;FS=6.480;HRun=0;HaplotypeScore=148.0648;InbreedingCoeff=-0.2967;MQ=27.59;MQ0=35;MQRankSum=0.277;QD=2.13;ReadPosRankSum=3.514;VQSLOD=2.0885;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:18:1.96:0,2,98	0/1:5,0:4:21.38:25,0,21	0/0:85,0:12:27.04:0,27,559	0/0:96,0:17:28.18:0,28,664	0/1:14,2:13:24.64:30,0,25	0/1:15,2:13:1.31:1,0,93	0/1:11,2:8:0.64:47,0,1	1/1:12,6:12:11.16:159,11,0	0/1:20,5:20:5.58:23,0,6	0/1:19,1:17:28.39:79,0,28	0/1:16,0:13:13.80:14,0,20	0/1:18,0:16:12.57:59,0,13	0/0:12,0:10:10.37:0,10,43	0/1:17,0:12:3.99:4,0,15	0/1:24,0:21:43.68:44,0,85	0/1:19,0:16:9.28:9,0,126	1/1:9,3:7:8.53:53,9,0	0/1:8,0:8:14.92:72,0,15	0/1:12,2:8:24.45:112,0,24	0/1:17,2:15:15.65:16,0,19	0/1:5,4:10:7.87:8,0,18	0/1:13,1:11:21.14:42,0,21	0/0:10,0:9:9.47:0,9,89	1/1:12,1:11:0.47:1,0,0	0/1:10,1:8:5.55:6,0,41	0/1:21,1:19:24.84:25,0,40	0/1:11,2:11:3.20:75,0,3	1/1:5,0:4:1.54:4,2,0
chr10	28764391	.	GA	G	647.35	PASS	AB=0.941;AC=38;AF=0.679;AN=56;BaseQRankSum=2.454;DP=492;FS=3.215;HRun=2;HaplotypeScore=128.5313;InbreedingCoeff=0.1335;MQ=27.12;MQ0=38;MQRankSum=-1.367;QD=2.32;ReadPosRankSum=1.062;VQSLOD=-0.1391;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:16,1:14:10.06:38,10,0	1/1:4,1:4:7.51:46,8,0	0/0:89,0:12:30.07:0,30,410	0/0:101,1:17:35.98:0,36,447	0/1:16,0:13:2.52:31,0,3	0/1:14,0:10:4.99:28,0,5	0/1:10,1:7:14.88:15,0,30	1/1:10,0:6:8.93:78,9,0	0/1:18,0:13:8.62:9,0,11	0/1:16,0:15:31.70:32,0,89	0/1:12,2:11:2.52:15,0,3	1/1:9,0:7:8.21:33,8,0	0/1:8,0:6:2.97:3,0,38	0/1:12,0:7:6.11:34,0,6	1/1:16,0:13:17.53:62,18,0	0/0:12,1:12:9.46:0,9,78	1/1:7,2:4:8.50:63,8,0	0/1:5,3:8:13.98:46,0,14	1/1:13,0:8:16:100,16,0	1/1:16,0:12:2.24:5,2,0	1/1:8,1:9:3.74:13,4,0	1/1:12,1:9:4.14:38,4,0	0/0:9,0:8:3.69:0,4,51	1/1:11,0:9:2.04:7,2,0	1/1:7,1:6:6.05:25,6,0	0/1:15,2:14:37.50:38,0,37	1/1:5,1:5:5.81:24,6,0	1/1:3,0:2:5.65:28,6,0
chr10	28764401	.	A	AG	3174.05	PASS	AB=0.953;AC=27;AF=0.482;AN=56;BaseQRankSum=2.256;DP=543;FS=110.803;HRun=1;HaplotypeScore=138.6307;InbreedingCoeff=-0.6161;MQ=28.11;MQ0=35;MQRankSum=-2.168;QD=9.83;ReadPosRankSum=0.073;VQSLOD=0.2795;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:18,3:18:42.37:228,0,42	0/1:5,1:6:6.92:143,0,7	0/0:103,0:14:38.95:0,39,513	0/0:112,0:16:16.58:0,17,395	0/1:13,0:11:41.36:41,0,65	0/1:13,1:10:54.18:229,0,54	0/1:13,0:9:23.62:24,0,77	0/1:12,0:11:60.56:86,0,61	0/1:14,0:9:49.54:50,0,56	0/1:15,2:17:47:344,0,47	0/1:14,0:12:42.40:88,0,42	0/1:8,0:6:27.98:28,0,63	0/1:9,0:6:27.94:68,0,28	0/1:11,1:7:46.18:68,0,46	0/1:16,0:13:53.97:289,0,54	1/1:13,1:13:33.06:407,33,0	1/1:9,0:4:4.80:37,5,0	0/1:11,1:12:81.50:110,0,81	0/1:15,2:13:65.82:190,0,66	0/1:15,0:15:49.22:62,0,49	0/1:12,0:12:47.42:47,0,66	0/1:12,1:11:17.17:133,0,17	0/1:10,0:9:51.07:51,0,95	0/1:10,1:10:32.76:33,0,77	0/1:12,2:12:0.31:260,0,0	0/1:19,1:16:29.82:295,0,30	0/1:6,0:5:15.19:23,0,15	0/0:5,0:5:11.88:0,12,82
chr10	28764405	.	G	GAA	4050.85	PASS	AB=0.839;AC=27;AF=0.482;AN=56;BaseQRankSum=1.289;DP=550;FS=133.366;HRun=1;HaplotypeScore=135.4869;InbreedingCoeff=-0.7407;MQ=31.50;MQ0=34;MQRankSum=0.472;QD=11.95;ReadPosRankSum=0.228;VQSLOD=0.5769;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:15,8:20:23.06:318,0,23	0/1:5,1:6:6.09:163,0,6	0/0:103,0:15:32.41:0,32,478	0/0:108,0:17:7.37:0,7,403	0/1:11,4:13:63.76:134,0,64	0/1:9,5:10:89.28:197,0,89	0/1:14,0:10:56.24:56,0,133	0/1:14,0:13:99:109,0,205	0/1:14,2:12:96.20:96,0,97	0/1:12,7:19:99:453,0,122	0/1:10,4:13:72.01:103,0,72	0/1:8,1:8:76.36:76,0,104	0/1:6,3:6:49.51:117,0,50	0/1:10,3:8:60.18:131,0,60	0/1:9,5:12:99:174,0,123	1/1:6,8:13:33.01:398,33,0	0/1:8,1:4:26.59:78,0,27	0/1:9,3:12:99:222,0,102	0/1:14,2:13:99:154,0,171	0/1:14,3:16:67.87:148,0,68	0/1:9,2:11:62.43:62,0,97	0/1:13,1:12:40.59:104,0,41	0/1:7,3:9:70.27:70,0,117	0/1:7,4:10:17.17:17,0,145	0/1:12,2:12:8.57:218,0,9	0/1:15,5:17:61.70:353,0,62	0/1:5,1:5:2.09:87,0,2	0/1:5,0:5:11.92:12,0,118
chr10	28765276	.	TTTTA	T	5780.24	PASS	AB=1.000;AC=49;AF=0.907;AN=54;BaseQRankSum=-0.047;DP=407;FS=1.081;HRun=0;HaplotypeScore=68.6560;InbreedingCoeff=0.5964;MQ=62.88;MQ0=0;MQRankSum=3.644;QD=15.97;ReadPosRankSum=0.849;VQSLOD=4.4196;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:14,24:39:51.17:812,51,0	1/1:5,3:8:6.02:96,6,0	./.	0/1:6,0:5:0:0,0,0	1/1:5,7:12:18.06:287,18,0	1/1:9,13:22:24.04:354,24,0	1/1:5,4:9:12.04:191,12,0	1/1:21,9:28:26.92:328,27,0	1/1:5,10:15:15.02:212,15,0	1/1:12,10:23:30.01:456,30,0	1/1:5,5:10:9.03:143,9,0	1/1:3,5:8:9.03:143,9,0	1/1:5,3:8:9.03:143,9,0	1/1:6,5:11:12.04:191,12,0	1/1:4,3:7:3.01:48,3,0	1/1:6,7:13:15.05:239,15,0	0/0:15,0:19:25.29:0,25,335	0/0:17,0:16:18.02:0,18,316	1/1:14,6:20:15.05:239,15,0	1/1:7,4:11:9.03:143,9,0	1/1:3,2:5:6.02:96,6,0	1/1:6,0:6:3:25,3,0	1/1:9,4:13:9.03:143,9,0	1/1:4,2:7:5.14:94,5,0	1/1:12,8:20:17.39:220,17,0	1/1:9,10:20:33.04:411,33,0	1/1:15,9:24:24.08:382,24,0	1/1:6,9:15:24.08:382,24,0
chr10	28765703	.	TC	T	12065.80	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=6.094;DP=578;FS=3.132;HRun=7;HaplotypeScore=71.2304;InbreedingCoeff=0.9910;MQ=61.16;MQ0=10;MQRankSum=-0.760;QD=23.89;ReadPosRankSum=3.862;VQSLOD=5.3999;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,39:41:99:1010,99,0	1/1:0,9:9:24.05:245,24,0	0/0:14,0:11:30.09:0,30,360	0/0:14,0:11:13.17:0,13,272	1/1:2,24:26:66.07:650,66,0	1/1:0,22:21:57.13:581,57,0	1/1:5,28:30:66.15:673,66,0	1/1:5,15:19:23.84:377,24,0	1/1:2,17:19:45.07:449,45,0	1/1:1,16:17:48.11:489,48,0	1/1:1,14:15:27.06:275,27,0	1/1:1,16:17:42.09:428,42,0	1/1:1,14:15:36.07:361,36,0	1/1:0,22:22:54.12:551,54,0	1/1:0,19:19:41.58:428,42,0	1/1:2,17:19:42.06:418,42,0	0/0:25,0:25:60.17:0,60,737	0/0:20,0:20:54.12:0,54,659	1/1:5,17:21:51.11:520,51,0	1/1:4,20:23:57.13:581,57,0	1/1:4,23:26:57.13:582,57,0	1/1:2,17:18:42.09:429,42,0	1/1:0,24:24:54.08:540,54,0	1/1:4,27:31:75.17:765,75,0	1/1:3,16:19:48.11:490,48,0	1/1:0,16:16:48.11:490,48,0	1/1:0,18:18:48.11:489,48,0	1/1:1,10:10:24.05:245,24,0
chr10	28766165	.	TG	T	13758.90	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=13.609;DP=750;FS=9.906;HRun=4;HaplotypeScore=263.2154;InbreedingCoeff=0.8674;MQ=62.54;MQ0=3;MQRankSum=-4.746;QD=20.69;ReadPosRankSum=3.089;VQSLOD=1.6494;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,35:44:90.28:998,90,0	1/1:4,10:13:32.96:338,33,0	0/0:12,0:11:30:0,30,335	0/0:16,0:14:26.81:0,27,286	1/1:18,0:18:8.94:83,9,0	1/1:5,15:20:42.12:469,42,0	1/1:9,18:27:41.95:436,42,0	1/1:22,0:22:48.13:534,48,0	1/1:3,30:33:78.21:868,78,0	1/1:5,24:29:78.08:844,78,0	1/1:0,12:12:17.48:200,17,0	1/1:3,39:42:99:1139,102,0	1/1:4,22:26:66.18:734,66,0	1/1:28,0:28:2.99:24,3,0	1/1:4,23:27:51.14:571,51,0	1/1:2,24:25:63.17:703,63,0	0/0:39,0:39:99:0,117,1576	0/0:18,0:18:54.16:0,54,737	1/1:7,16:23:48.13:533,48,0	1/1:3,16:19:30.55:337,31,0	1/1:10,55:64:95:1020,95,0	1/1:5,25:30:51.34:561,51,0	1/1:19,0:19:3:26,3,0	1/1:5,41:45:98.56:1081,99,0	1/1:5,22:27:57.15:631,57,0	1/1:6,29:35:87.02:938,87,0	1/1:7,21:28:59.35:623,59,0	1/1:2,2:4:6.02:67,6,0
chr10	28766169	.	GT	G	13776.09	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=13.414;DP=668;FS=7.804;HRun=1;HaplotypeScore=251.0211;InbreedingCoeff=0.8676;MQ=63.15;MQ0=3;MQRankSum=-4.029;QD=23.55;ReadPosRankSum=3.667;VQSLOD=3.9675;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:40,0:39:90.70:999,91,0	1/1:12,0:11:32.97:338,33,0	0/0:12,0:11:30.06:0,30,402	0/0:15,0:13:29.99:0,30,347	1/1:14,0:14:8.94:83,9,0	1/1:18,0:18:44.15:475,44,0	1/1:18,0:18:41.95:436,42,0	1/1:0,16:16:48.13:534,48,0	1/1:30,0:30:78.21:868,78,0	1/1:27,0:27:78.11:845,78,0	1/1:12,0:12:17.55:200,18,0	1/1:40,0:40:99:1139,102,0	1/1:25,0:25:68.22:740,68,0	1/1:27,0:27:2.99:24,3,0	1/1:24,0:24:51.60:564,52,0	1/1:25,0:24:63.64:704,64,0	0/0:38,0:38:99:0,114,1742	0/0:18,0:18:51.17:0,51,798	1/1:16,0:16:48.13:533,48,0	1/1:16,0:16:30.97:338,31,0	1/1:59,0:58:95.42:1022,95,0	1/1:26,0:26:51.60:562,52,0	1/1:15,0:15:3:26,3,0	1/1:44,0:43:98.74:1082,99,0	1/1:24,0:24:57.15:631,57,0	1/1:31,0:31:87.54:939,88,0	1/1:24,0:24:59.51:626,60,0	1/1:2,0:2:6.02:67,6,0
chr10	28766170	.	TG	T	13757.71	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=13.109;DP=673;FS=6.009;HRun=4;HaplotypeScore=252.1661;InbreedingCoeff=0.8658;MQ=62.37;MQ0=3;MQRankSum=-5.612;QD=23.28;ReadPosRankSum=3.786;VQSLOD=2.7006;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:40,0:39:90.70:999,91,0	1/1:12,0:11:32.96:338,33,0	0/0:11,0:10:21.43:0,21,341	0/0:15,0:13:21.60:0,22,319	1/1:15,0:15:8.94:83,9,0	1/1:18,0:18:42.57:470,43,0	1/1:18,0:18:41.93:436,42,0	1/1:16,0:16:48.13:534,48,0	1/1:30,0:30:78.20:868,78,0	1/1:27,0:27:78.08:844,78,0	1/1:12,0:12:17.52:200,18,0	1/1:41,0:41:99:1139,102,0	1/1:25,0:25:66.33:734,66,0	1/1:27,0:27:2.99:24,3,0	1/1:24,0:24:48.94:559,49,0	1/1:25,0:24:62.42:702,62,0	0/0:38,0:38:99:0,114,1792	0/0:18,0:18:51.17:0,51,815	1/1:16,0:16:48.13:533,48,0	1/1:16,0:16:30.96:337,31,0	1/1:61,0:60:95.34:1021,95,0	1/1:26,0:26:51.60:562,52,0	1/1:0,15:15:3.01:39,3,0	1/1:46,0:45:98.65:1081,99,0	1/1:24,0:24:57.14:631,57,0	1/1:31,0:31:84.76:935,85,0	1/1:24,0:24:59.35:624,59,0	1/1:2,0:2:6.02:67,6,0
chr10	28766171	.	GT	G	13804.76	PASS	AB=1.000;AC=49;AF=0.875;AN=56;BaseQRankSum=12.638;DP=679;FS=6.187;HRun=1;HaplotypeScore=251.9736;InbreedingCoeff=0.7697;MQ=63.71;MQ0=3;MQRankSum=-5.520;QD=22.56;ReadPosRankSum=3.024;VQSLOD=4.3601;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:40,0:39:90.70:999,91,0	1/1:12,0:11:32.96:338,33,0	0/0:12,0:11:14.83:0,15,296	0/1:16,0:14:1.89:2,0,253	1/1:1,14:15:8.94:88,9,0	1/1:19,0:19:43.36:473,43,0	1/1:18,0:18:41.95:436,42,0	1/1:17,0:17:48.13:534,48,0	1/1:30,0:30:78.21:868,78,0	1/1:28,0:28:78.08:844,78,0	1/1:12,0:12:17.52:200,18,0	1/1:41,0:41:99:1139,102,0	1/1:25,0:25:69.29:741,69,0	1/1:4,25:29:3.01:41,3,0	1/1:24,0:24:53.81:574,54,0	1/1:25,0:24:65.39:710,65,0	0/0:37,0:37:99:0,111,1768	0/0:18,0:18:51.17:0,51,815	1/1:16,0:16:48.13:533,48,0	1/1:16,0:16:30.97:337,31,0	1/1:61,0:60:95.42:1023,95,0	1/1:28,0:28:51.60:562,52,0	1/1:15,0:15:3.01:39,3,0	1/1:45,0:44:96.07:1072,96,0	1/1:24,0:24:57.15:631,57,0	1/1:32,0:32:89.82:951,90,0	1/1:22,0:22:54.15:603,54,0	1/1:2,0:2:6.02:67,6,0
chr10	28766555	.	G	GA	6974.42	PASS	AB=0.680;AC=43;AF=0.796;AN=54;BaseQRankSum=-7.542;DP=399;FS=18.633;HRun=10;HaplotypeScore=40.2901;InbreedingCoeff=0.4153;MQ=82.07;MQ0=1;MQRankSum=-1.747;QD=20.27;ReadPosRankSum=3.400;VQSLOD=3.6399;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,34:38:81.20:864,81,0	./.	0/1:18,0:15:26.63:27,0,111	0/0:19,0:17:11.09:0,11,137	1/1:3,20:24:35.19:535,35,0	1/1:1,6:10:20.55:170,21,0	1/1:4,14:18:17.46:391,17,0	1/1:8,12:20:5.26:339,5,0	0/1:2,3:5:2.75:55,0,3	1/1:1,7:8:18.05:192,18,0	0/1:2,2:4:15.51:55,0,16	1/1:2,7:10:20.92:206,21,0	1/1:0,6:6:18.05:192,18,0	1/1:0,9:10:26.90:270,27,0	1/1:2,12:14:5.32:234,5,0	1/1:5,10:15:11.24:309,11,0	0/0:15,0:15:37.99:0,38,301	0/0:19,1:20:21.95:0,22,386	1/1:6,11:17:33.08:345,33,0	1/1:0,8:8:21.05:224,21,0	0/1:4,11:15:10.08:313,0,10	1/1:4,16:20:14.45:359,14,0	1/1:2,12:14:27.07:287,27,0	1/1:3,21:24:51.13:544,51,0	1/1:3,12:15:33.08:351,33,0	1/1:4,14:18:42.05:427,42,0	0/1:1,7:8:6.59:142,0,7	1/1:0,4:5:14.87:142,15,0
chr10	28767490	.	T	TAC	26427.32	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-0.295;DP=687;FS=2.327;HRun=0;HaplotypeScore=140.2683;InbreedingCoeff=0.9889;MQ=81.15;MQ0=0;MQRankSum=-8.739;QD=41.42;ReadPosRankSum=4.743;VQSLOD=5.8119;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,31:33:72.25:1262,72,0	1/1:3,11:14:36.12:625,36,0	0/0:17,0:17:39.13:0,39,519	0/0:31,0:32:20.07:0,20,664	1/1:2,27:29:69.24:1200,69,0	1/1:2,26:28:72.25:1261,72,0	1/1:3,25:28:72.25:1262,72,0	1/1:4,17:22:48.16:841,48,0	1/1:1,16:17:45.15:788,45,0	1/1:4,22:26:69.24:1204,69,0	1/1:3,12:15:36.12:625,36,0	1/1:2,17:20:48.16:840,48,0	1/1:4,29:33:87.30:1518,87,0	1/1:3,17:20:45.15:788,45,0	1/1:5,21:27:54.18:946,54,0	1/1:4,12:16:33.11:578,33,0	1/1:0,23:23:60.21:1051,60,0	1/1:3,27:32:81.28:1416,81,0	1/1:2,14:17:45.14:755,45,0	1/1:1,17:18:45.15:788,45,0	1/1:7,49:55:99:1995,114,0	1/1:5,19:25:57.19:983,57,0	1/1:3,17:20:41.90:736,42,0	1/1:6,32:38:87.30:1525,87,0	1/1:1,15:16:45.15:788,45,0	1/1:4,23:27:66.21:1129,66,0	1/1:3,28:32:72.25:1259,72,0	1/1:1,5:6:15.05:263,15,0
chr10	28767886	.	C	CT	487.97	PASS	AB=0.878;AC=15;AF=0.268;AN=56;BaseQRankSum=1.092;DP=248;FS=0.000;HRun=1;HaplotypeScore=83.4128;InbreedingCoeff=-0.1993;MQ=48.29;MQ0=11;MQRankSum=0.285;QD=4.74;ReadPosRankSum=0.285;VQSLOD=0.0756;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:5.62:0,6,54	0/0:6,0:6:2.91:0,3,18	0/0:33,0:8:12.03:0,12,150	0/0:23,0:6:3.87:0,4,46	0/0:4,0:4:0:0,0,0	0/1:5,2:7:64.51:65,0,122	0/1:4,0:7:5.87:6,0,15	0/1:20,0:18:99:184,0,146	0/1:8,0:8:16.83:17,0,37	0/0:3,1:4:9.49:0,9,110	0/0:1,1:2:2.37:0,2,8	0/1:4,1:5:23.86:34,0,24	0/0:4,0:3:0:0,0,0	0/1:11,1:12:29.69:30,0,129	0/0:10,0:10:18.01:0,18,227	0/1:8,0:8:17.83:18,0,24	0/1:1,1:2:35.68:36,0,36	0/0:6,0:5:2.60:0,3,6	0/1:4,0:4:31.26:31,0,34	0/0:9,0:9:3.70:0,4,30	0/0:12,0:11:5.96:0,6,44	0/0:8,0:11:14.78:0,15,124	0/1:7,0:7:0.17:0,0,0	1/1:1,1:1:3.01:41,3,0	0/0:8,0:8:1.11:0,1,23	0/1:7,2:9:3.90:75,0,4	0/1:7,1:8:38.59:39,0,56	0/1:3,1:4:13.12:48,0,13
chr10	28767888	.	C	CTCCCTCTCT	10297.02	PASS	AB=0.751;AC=43;AF=0.768;AN=56;BaseQRankSum=-5.758;DP=262;FS=17.566;HRun=0;HaplotypeScore=81.2040;InbreedingCoeff=0.0336;MQ=48.82;MQ0=15;MQRankSum=-0.014;QD=53.35;ReadPosRankSum=2.776;VQSLOD=3.3456;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,8:13:19.77:627,20,0	1/1:1,3:6:2.57:146,3,0	0/0:37,0:8:8.91:0,9,155	0/0:27,0:7:3.47:0,3,28	1/1:2,3:4:6.02:293,6,0	1/1:7,0:7:18.06:499,18,0	0/1:5,1:6:9.75:139,0,10	1/1:13,0:20:19.77:1140,20,0	1/1:1,7:8:18.06:828,18,0	1/1:3,0:3:5.85:136,6,0	0/0:1,0:2:0.28:0,0,6	0/1:2,1:4:3.42:217,0,3	1/1:1,2:3:6.02:293,6,0	1/1:4,5:12:1.17:552,1,0	1/1:6,4:11:0.82:434,1,0	0/1:0,6:8:49.92:709,0,50	1/1:2,0:2:6.02:115,6,0	1/1:1,5:5:9.03:441,9,0	0/1:2,3:4:46.59:391,0,47	0/1:4,3:10:24.54:170,0,25	1/1:5,6:12:12:454,12,0	0/1:6,1:10:44.41:150,0,44	1/1:2,5:7:2.01:574,2,0	1/1:1,0:1:3.01:63,3,0	0/1:1,2:8:4.98:164,0,5	1/1:2,4:9:15.45:566,15,0	1/1:2,4:7:21.07:877,21,0	1/1:2,0:4:9.03:323,9,0
chr10	28767897	.	TTC	T	233.35	PASS	AB=0.904;AC=6;AF=0.107;AN=56;BaseQRankSum=-1.704;DP=279;FS=4.424;HRun=0;HaplotypeScore=89.0562;InbreedingCoeff=-0.1310;MQ=53.38;MQ0=16;MQRankSum=-1.977;QD=2.51;ReadPosRankSum=-1.692;VQSLOD=1.6881;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:12,0:12:48.21:48,0,117	0/0:5,0:5:8.51:0,9,98	0/0:43,0:9:15.35:0,15,198	0/1:35,0:10:8.94:9,0,75	0/0:6,0:5:0.67:0,1,67	0/1:4,2:6:67.69:77,0,68	0/0:4,0:3:8.88:0,9,84	0/1:21,5:24:99:169,0,605	0/1:9,0:8:9.29:9,0,267	0/0:2,0:2:0:0,0,0	0/0:4,0:2:6:0,6,84	0/0:3,0:3:6.02:0,6,121	0/0:4,0:3:9.03:0,9,179	0/0:9,0:9:17.95:0,18,232	0/0:7,0:7:11.88:0,12,128	0/0:8,0:8:23.91:0,24,369	0/0:1,0:1:3.01:0,3,61	0/0:5,0:4:1.13:0,1,81	0/0:10,0:6:17.41:0,17,247	0/0:9,0:8:12.91:0,13,155	0/0:12,0:9:8.24:0,8,97	0/0:12,0:10:17.89:0,18,290	0/0:10,0:9:7.26:0,7,168	0/0:4,0:3:9.03:0,9,155	0/0:8,0:8:20.96:0,21,271	0/0:11,0:11:1.91:0,2,325	0/0:7,0:7:21.07:0,21,391	0/1:4,1:5:35.68:36,0,113
chr10	28767899	.	C	CTTT	1081.95	PASS	AB=0.906;AC=16;AF=0.286;AN=56;BaseQRankSum=1.557;DP=282;FS=2.855;HRun=2;HaplotypeScore=91.6017;InbreedingCoeff=-0.4313;MQ=55.16;MQ0=19;MQRankSum=-2.955;QD=6.29;ReadPosRankSum=0.212;VQSLOD=-0.7343;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:11,1:12:99:122,0,116	0/1:5,1:6:40.12:40,0,71	0/0:44,0:8:10.64:0,11,163	0/1:34,0:11:46.31:46,0,48	0/0:6,0:5:8.91:0,9,81	0/1:6,0:6:82.70:86,0,83	0/0:4,0:3:8.98:0,9,91	0/1:24,1:23:99:107,0,624	0/0:8,0:7:18.06:0,18,287	0/0:2,0:2:2.04:0,2,6	0/1:3,1:2:49.63:67,0,50	0/0:2,1:3:6.02:0,6,103	0/1:5,0:4:5.77:6,0,138	0/1:8,1:9:49.88:50,0,221	0/1:6,1:7:38.52:39,0,81	0/1:7,1:8:68.25:68,0,266	0/0:1,0:1:3.01:0,3,56	0/0:6,0:4:9.03:0,9,160	0/0:13,0:8:17.15:0,17,262	0/1:9,1:9:87.01:106,0,87	0/0:11,0:8:9:0,9,110	0/1:10,1:9:99:102,0,160	0/1:10,0:9:9.44:9,0,117	0/0:4,0:3:9.03:0,9,142	0/1:5,3:8:49.82:172,0,50	0/1:7,3:10:99:197,0,227	0/0:7,0:7:21.07:0,21,338	0/1:6,0:5:16.76:17,0,102
chr10	28767907	.	TCCC	T	82.35	PASS	AB=0.961;AC=8;AF=0.143;AN=56;BaseQRankSum=-0.057;DP=272;FS=4.350;HRun=4;HaplotypeScore=93.5000;InbreedingCoeff=-0.0725;MQ=57.65;MQ0=19;MQRankSum=-1.684;QD=1.11;ReadPosRankSum=-0.873;VQSLOD=-0.7304;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:11,0:11:28.28:28,0,154	0/0:5,0:4:9.02:0,9,143	0/0:42,0:10:18.05:0,18,187	0/0:27,0:8:7.54:0,8,108	0/1:5,0:4:11.17:11,0,79	0/0:6,0:6:8.24:0,8,79	0/0:4,0:3:9.03:0,9,136	0/1:27,3:27:73.91:74,0,749	0/0:8,0:7:18.06:0,18,373	1/1:3,0:2:1.25:3,1,0	0/0:5,0:2:6.02:0,6,134	0/0:3,0:3:9.03:0,9,197	0/0:4,0:4:12.04:0,12,254	0/0:6,0:6:17.09:0,17,304	0/1:5,1:6:42.46:42,0,69	0/0:8,0:8:24.08:0,24,457	0/0:2,0:1:3.01:0,3,47	0/0:5,0:3:9.03:0,9,162	0/0:12,0:7:21.07:0,21,420	0/1:8,0:7:24.49:24,0,101	0/0:11,0:8:5.97:0,6,87	0/0:11,0:9:21.06:0,21,343	0/1:11,0:9:21.52:22,0,160	0/0:4,0:3:9.03:0,9,149	0/0:8,0:8:19.40:0,19,140	0/0:8,1:9:23.29:0,23,430	0/0:7,0:7:21.07:0,21,446	0/0:6,0:5:9.89:0,10,166
chr10	28767910	.	C	CCTT	612.72	PASS	AB=0.900;AC=12;AF=0.214;AN=56;BaseQRankSum=2.980;DP=274;FS=11.610;HRun=0;HaplotypeScore=91.2653;InbreedingCoeff=-0.2399;MQ=57.38;MQ0=20;MQRankSum=-3.409;QD=5.52;ReadPosRankSum=1.992;VQSLOD=1.3945;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:12,0:12:16.01:16,0,131	0/0:5,0:4:5.85:0,6,86	0/0:48,0:10:13.56:0,14,115	0/1:25,0:8:32.58:33,0,39	0/0:5,0:4:3.39:0,3,86	0/0:5,0:5:6.47:0,6,62	0/0:4,0:3:8.97:0,9,93	0/0:28,0:25:0.36:0,0,593	0/0:8,0:7:15.05:0,15,239	1/1:2,1:2:0.89:2,1,0	0/1:3,2:2:8.30:8,0,43	0/0:3,0:3:9.03:0,9,146	0/0:4,0:4:12.04:0,12,196	0/0:6,0:6:16.85:0,17,210	0/1:6,0:6:44.29:63,0,44	0/1:7,1:8:46.68:47,0,233	0/0:2,0:1:3.01:0,3,39	0/0:5,0:3:6.02:0,6,87	0/0:12,0:7:21.07:0,21,308	0/1:8,1:7:84.34:136,0,84	0/0:11,0:8:3.90:0,4,51	0/1:9,2:9:99:165,0,124	0/1:10,1:9:42.57:63,0,43	0/0:4,0:3:8.92:0,9,113	0/1:6,2:8:30.75:208,0,31	0/1:9,0:9:7.18:7,0,220	0/0:7,0:7:21.06:0,21,309	0/0:6,0:5:6.02:0,6,98
chr10	28767936	.	T	TTCC	468.89	PASS	AB=0.880;AC=14;AF=0.292;AN=48;BaseQRankSum=1.913;DP=123;FS=0.000;HRun=0;HaplotypeScore=54.4720;InbreedingCoeff=-0.2715;MQ=65.31;MQ0=6;MQRankSum=-1.007;QD=5.94;ReadPosRankSum=-0.169;VQSLOD=1.4508;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:3,1:4:12.37:51,0,12	./.	0/1:19,0:5:8.81:9,0,49	0/1:14,0:5:0.59:1,0,49	0/0:2,1:3:2.54:0,3,25	0/0:1,0:1:2.50:0,2,9	0/0:2,0:1:3:0,3,29	0/0:9,0:8:23.96:0,24,209	0/0:4,0:4:8.98:0,9,77	./.	0/1:2,1:3:22.91:29,0,23	0/0:2,0:2:6.01:0,6,58	0/0:4,0:4:9.01:0,9,86	0/1:2,1:3:48.34:49,0,48	0/1:3,1:4:35.23:43,0,35	0/1:4,0:5:44.64:82,0,45	1/1:2,0:1:0.89:2,1,0	./.	0/0:2,0:1:3:0,3,28	0/1:3,1:3:0.48:51,0,0	0/0:6,0:4:3:0,3,29	0/1:4,0:5:40.28:85,0,40	0/1:5,0:4:12.65:18,0,13	./.	0/1:3,1:4:9.81:56,0,10	0/1:4,1:6:77.41:120,0,77	0/0:3,0:3:9.02:0,9,87	0/0:3,0:3:6.01:0,6,56
chr10	28767939	.	TTC	T	278.82	PASS	AB=1.000;AC=17;AF=0.405;AN=42;BaseQRankSum=-1.168;DP=104;FS=0.000;HRun=0;HaplotypeScore=48.7700;InbreedingCoeff=0.2751;MQ=49.80;MQ0=4;MQRankSum=-0.665;QD=7.54;ReadPosRankSum=-2.528;VQSLOD=2.5702;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:4:2.04:0,2,6	./.	0/0:17,0:3:0.26:0,0,0	0/0:9,0:3:5.99:0,6,71	1/1:1,2:3:5.99:57,6,0	1/1:0,1:1:2.97:20,3,0	0/0:2,0:1:2.94:0,3,18	0/0:7,0:6:11.77:0,12,74	0/0:2,0:2:2.94:0,3,18	./.	0/1:3,0:3:5.77:29,0,6	0/0:2,0:2:2.94:0,3,18	0/0:4,0:4:5.54:0,6,26	0/0:3,0:3:5.42:0,5,23	1/1:4,0:4:0.47:1,0,0	0/1:5,0:5:6.64:7,0,24	./.	./.	./.	1/1:2,2:3:3.01:35,3,0	./.	1/1:3,2:5:9.02:99,9,0	1/1:2,2:3:8.79:67,9,0	./.	1/1:2,2:4:0.81:63,1,0	0/1:4,0:4:24.58:28,0,25	0/0:3,0:3:2.94:0,3,18	0/0:3,0:3:2.94:0,3,18
chr10	28767941	.	C	CT	913.58	PASS	AB=0.969;AC=32;AF=0.727;AN=44;BaseQRankSum=-1.468;DP=89;FS=7.132;HRun=2;HaplotypeScore=41.2836;InbreedingCoeff=0.3054;MQ=52.81;MQ0=3;MQRankSum=-1.287;QD=14.06;ReadPosRankSum=1.739;VQSLOD=2.6168;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,1:3:3.01:49,3,0	./.	0/1:14,1:3:0:0,0,0	0/0:8,0:3:5.98:0,6,50	0/1:3,0:3:0.04:0,0,0	0/0:1,0:1:0:0,0,0	1/1:0,1:1:3.01:45,3,0	1/1:2,4:6:12.51:181,13,0	1/1:1,1:2:6.02:81,6,0	./.	1/1:1,1:2:5.38:53,5,0	1/1:0,1:1:3.01:45,3,0	1/1:2,2:4:6.02:90,6,0	1/1:0,2:2:6.02:90,6,0	0/0:3,0:4:1.51:0,2,4	1/1:2,2:4:3.83:86,4,0	./.	./.	./.	0/0:3,0:2:0:0,0,0	1/1:5,0:3:2.50:9,2,0	0/0:4,0:4:0.36:0,0,1	1/1:3,1:3:6.22:47,6,0	./.	1/1:3,0:4:4.37:57,4,0	1/1:1,2:3:4.02:86,4,0	1/1:0,2:2:3.01:45,3,0	1/1:2,1:3:3.01:45,3,0
chr10	28768368	.	CG	C	1311.76	PASS	AB=0.755;AC=28;AF=0.560;AN=50;BaseQRankSum=-5.262;DP=148;FS=0.000;HRun=1;HaplotypeScore=50.8324;InbreedingCoeff=-0.1762;MQ=60.48;MQ0=1;MQRankSum=0.681;QD=11.02;ReadPosRankSum=-3.783;VQSLOD=0.1498;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:5,4:9:23.73:24,0,87	./.	0/0:12,1:6:6.41:0,6,51	0/1:22,0:11:17.23:17,0,54	1/1:0,2:1:3:29,3,0	0/1:2,7:9:6.75:160,0,7	0/1:2,2:4:16.30:74,0,16	1/1:0,0:1:1.55:4,2,0	0/0:4,1:4:10.43:0,10,71	1/1:3,8:11:7.99:304,8,0	0/1:4,5:9:11.44:104,0,11	0/1:3,1:4:17.01:17,0,64	0/1:2,1:3:15.03:44,0,15	0/0:2,0:2:1.18:0,1,23	0/1:2,2:4:39.53:71,0,40	0/1:3,3:6:61.28:68,0,61	1/1:1,1:3:2.22:8,2,0	./.	1/1:1,1:2:3.01:42,3,0	1/1:1,4:4:9.02:103,9,0	1/1:1,1:2:2.68:11,3,0	1/1:2,10:9:22.97:259,23,0	0/1:2,1:3:15.74:73,0,16	0/1:2,0:2:1.70:2,0,2	0/0:3,4:5:0.39:0,0,22	0/1:5,1:6:35.58:36,0,59	0/0:1,0:1:0.89:0,1,2	./.
chr10	28768384	.	CCTCCT	C	815	PASS	AB=1.000;AC=31;AF=0.620;AN=50;BaseQRankSum=-1.783;DP=215;FS=2.225;HRun=0;HaplotypeScore=75.4837;InbreedingCoeff=0.0499;MQ=51.35;MQ0=6;MQRankSum=-1.367;QD=6.63;ReadPosRankSum=-3.260;VQSLOD=1.2114;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:12,0:12:25.02:39,0,25	./.	0/0:36,0:8:15.05:0,15,356	0/0:45,0:16:34.97:0,35,647	./.	1/1:8,2:10:0.65:61,1,0	0/1:8,0:8:4.24:75,0,4	1/1:5,1:6:8.35:87,8,0	0/1:5,0:4:6.97:46,0,7	1/1:8,0:8:7.21:41,7,0	1/1:9,2:11:8.94:86,9,0	0/1:6,0:6:26.72:58,0,27	1/1:5,0:4:8.69:91,9,0	1/1:1,0:1:1.82:5,2,0	0/1:4,0:4:16.58:22,0,17	0/1:7,0:7:27.80:28,0,30	1/1:5,0:5:9.23:66,9,0	1/1:2,1:3:5.05:67,5,0	0/1:5,0:4:0.04:16,0,0	1/1:5,0:4:5.30:25,5,0	1/1:2,0:2:2.68:11,3,0	1/1:9,0:6:5.74:36,6,0	0/0:3,0:3:3.97:0,4,30	0/1:5,0:5:15.57:44,0,16	0/0:6,0:4:2.94:0,3,18	0/1:6,0:6:8.79:57,0,9	0/0:2,0:2:2.04:0,2,6	./.
chr10	28768385	.	CT	C	663.87	PASS	AB=0.731;AC=27;AF=0.540;AN=50;BaseQRankSum=-0.785;DP=219;FS=6.166;HRun=1;HaplotypeScore=68.1830;InbreedingCoeff=0.1097;MQ=50.97;MQ0=6;MQRankSum=-0.146;QD=6.09;ReadPosRankSum=2.348;VQSLOD=0.8082;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:7,5:12:26.70:87,0,27	./.	0/0:38,0:9:15.49:0,15,190	0/0:46,2:17:32.21:0,32,448	./.	1/1:8,2:10:4.33:57,4,0	0/1:5,3:8:38.95:39,0,67	1/1:3,3:6:8.92:68,9,0	1/1:2,3:4:8.99:82,9,0	0/0:8,0:8:5.37:0,5,124	1/1:6,5:11:6.67:42,7,0	1/1:3,4:7:6.19:55,6,0	0/1:3,1:3:13.70:34,0,14	1/1:0,1:1:3.01:34,3,0	0/1:3,1:4:20.07:48,0,20	0/1:2,5:7:3.63:106,0,4	0/0:5,0:5:6.07:0,6,61	0/0:3,0:3:0.01:0,0,6	0/1:4,1:4:0.23:0,0,20	0/0:4,1:4:7.85:0,8,40	1/1:1,1:2:3.01:34,3,0	1/1:8,0:6:1.76:9,2,0	0/1:2,1:3:0.06:7,0,0	0/1:3,2:5:8.39:22,0,8	1/1:4,1:3:2.98:21,3,0	0/1:3,3:6:44.06:67,0,44	0/0:2,0:2:2.97:0,3,38	./.
chr10	28768389	.	T	TTC	1378.58	PASS	AB=0.820;AC=41;AF=0.788;AN=52;BaseQRankSum=2.437;DP=226;FS=16.483;HRun=0;HaplotypeScore=75.1982;InbreedingCoeff=0.2654;MQ=47.27;MQ0=10;MQRankSum=-2.567;QD=11.12;ReadPosRankSum=3.048;VQSLOD=1.7929;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,4:9:17:182,17,0	0/1:1,0:1:0:0,0,0	0/0:43,0:8:15.03:0,15,219	0/0:53,0:18:38.59:0,39,552	./.	1/1:5,1:7:9.09:77,9,0	1/1:2,2:8:10.75:88,11,0	1/1:3,2:5:8.98:82,9,0	1/1:2,1:6:10.27:121,10,0	1/1:2,0:4:8.90:36,9,0	1/1:5,3:10:5.98:76,6,0	1/1:3,2:6:12.26:128,12,0	0/1:4,1:5:6.52:35,0,7	1/1:0,1:1:3.01:34,3,0	1/1:4,1:5:7.56:94,8,0	1/1:3,2:9:17.33:163,17,0	1/1:1,0:4:4.89:27,5,0	1/1:3,0:4:5.90:40,6,0	1/1:3,0:3:4.83:40,5,0	0/0:4,0:4:0.75:0,1,5	1/1:1,1:2:3.01:34,3,0	0/1:8,0:6:8.53:13,0,9	1/1:2,0:3:5.19:36,5,0	0/1:2,2:5:22.53:30,0,23	1/1:2,1:2:3.01:40,3,0	0/1:4,2:8:1.28:133,0,1	1/1:2,0:3:2.04:6,2,0	./.
chr10	28768390	.	C	CT	1436.69	PASS	AB=1.000;AC=41;AF=0.820;AN=50;BaseQRankSum=0.137;DP=240;FS=11.885;HRun=1;HaplotypeScore=74.5289;InbreedingCoeff=0.2253;MQ=46.16;MQ0=12;MQRankSum=-2.218;QD=10.41;ReadPosRankSum=2.286;VQSLOD=0.4059;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,0:10:17.71:142,18,0	./.	0/0:43,1:9:14.64:0,15,185	0/0:54,0:18:39.55:0,40,455	./.	1/1:6,0:7:11.07:57,11,0	1/1:9,1:10:14.98:139,15,0	1/1:10,0:7:6.48:62,6,0	1/1:7,0:6:8.97:72,9,0	1/1:4,1:5:11.96:111,12,0	1/1:10,0:10:8.25:52,8,0	1/1:4,0:6:15.47:145,15,0	1/1:6,0:5:6.94:44,7,0	1/1:1,0:1:2.97:20,3,0	0/1:5,0:5:0.41:89,0,0	0/1:9,0:9:1.15:101,0,1	1/1:4,0:4:10.80:78,11,0	0/1:6,0:6:12.16:12,0,12	1/1:3,1:3:5.92:39,6,0	1/1:5,0:4:7.22:58,7,0	1/1:2,0:2:2.97:20,3,0	1/1:7,2:6:5.74:56,6,0	1/1:1,1:2:6.01:59,6,0	0/1:5,0:5:10.69:11,0,29	1/1:3,0:2:3:26,3,0	1/1:7,1:8:15.26:161,15,0	0/1:4,0:4:13.91:19,0,14	./.
chr10	28768614	.	GTT	G	6382.92	PASS	AC=46;AF=0.852;AN=54;BaseQRankSum=-4.768;DP=460;FS=6.415;HRun=14;HaplotypeScore=92.5558;InbreedingCoeff=0.9511;MQ=77.03;MQ0=5;MQRankSum=-1.950;QD=18.50;ReadPosRankSum=4.047;VQSLOD=4.2835;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,29:32:74.67:725,75,0	1/1:0,3:3:9.01:83,9,0	0/0:40,0:26:26.69:0,27,354	0/0:27,0:20:18.27:0,18,201	1/1:0,7:6:18.02:167,18,0	1/1:2,17:19:45.03:416,45,0	1/1:3,14:17:39.01:361,39,0	1/1:11,12:24:38.59:340,39,0	1/1:2,11:14:20.87:241,21,0	1/1:9,14:24:38.64:344,39,0	1/1:1,9:11:17.63:198,18,0	1/1:4,8:12:19.21:169,19,0	1/1:3,13:16:38.76:345,39,0	1/1:1,13:16:29.64:309,30,0	1/1:2,14:16:36.04:333,36,0	1/1:1,6:7:15.02:139,15,0	0/0:6,0:27:56.09:0,56,545	0/0:8,0:17:33.07:0,33,363	1/1:12,16:28:44.83:415,45,0	1/1:1,6:8:17.72:151,18,0	1/1:4,14:19:35.88:380,36,0	1/1:2,6:9:11.60:142,12,0	1/1:2,6:8:14.97:139,15,0	1/1:3,11:14:32.78:290,33,0	1/1:0,11:10:21:194,21,0	1/1:3,10:12:30.02:277,30,0	1/1:6,8:15:20.67:225,21,0	./.
chr10	28769611	.	TTGTGTG	T	6295.38	PASS	AB=0.961;AC=35;AF=0.673;AN=52;BaseQRankSum=-6.270;DP=550;FS=3.642;HRun=0;HaplotypeScore=129.8672;InbreedingCoeff=0.0728;MQ=62.26;MQ0=14;MQRankSum=1.464;QD=14.61;ReadPosRankSum=7.141;VQSLOD=3.6128;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,15:34:5.99:0,6,66	0/0:3,0:3:2.97:0,3,20	./.	0/0:26,0:12:6.02:0,6,66	0/1:13,0:14:0.31:293,0,0	./.	1/1:34,0:35:32.16:958,32,0	1/1:15,4:18:12.04:219,12,0	1/1:12,0:14:12.03:177,12,0	0/1:16,0:14:25.62:56,0,26	0/1:12,0:12:16.18:106,0,16	0/1:25,0:26:76.74:425,0,77	1/1:13,0:14:23.02:274,23,0	1/1:17,0:21:30.10:582,30,0	1/1:20,1:24:11.72:379,12,0	0/1:18,0:20:26.44:484,0,26	0/1:31,0:30:99:219,0,232	0/1:12,0:12:62.83:63,0,77	0/1:19,0:19:3.03:90,0,3	0/0:10,7:17:2.98:0,3,22	1/1:30,0:31:26.98:424,27,0	1/1:14,0:15:8.70:132,9,0	1/1:10,8:18:2.65:55,3,0	1/1:24,0:25:8.34:499,8,0	1/1:12,3:19:17.75:352,18,0	1/1:19,0:19:12.04:228,12,0	0/1:12,0:14:27.04:272,0,27	1/1:6,0:6:2.37:8,2,0
chr10	28770173	.	CTCTCTCTCTCTCTCTCTCTCTCTCTACTCCTTTCTCAACT	C	22733.45	PASS	AB=0.992;AC=30;AF=0.536;AN=56;BaseQRankSum=8.969;DP=608;FS=4.087;HRun=0;HaplotypeScore=336.1075;InbreedingCoeff=-0.3714;MQ=44.03;MQ0=27;MQRankSum=-6.092;QD=46.21;ReadPosRankSum=9.390;VQSLOD=1.8810;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:40,0:39:30.64:744,0,31	0/1:10,1:11:8.94:1430,0,9	0/0:35,0:16:38.89:0,39,1432	0/0:62,0:15:37.17:0,37,1186	0/1:21,0:20:37.87:410,0,38	1/1:15,0:15:12.04:988,12,0	0/1:24,0:23:24.47:315,0,24	0/1:23,0:21:2.95:3,0,485	1/1:25,1:26:10.58:2283,11,0	0/1:24,0:24:57.68:1941,0,58	0/1:12,0:12:8.18:117,0,8	0/1:21,1:22:0.21:1963,0,0	1/1:14,0:14:9.50:702,10,0	1/1:31,0:31:12.51:988,13,0	0/1:30,1:31:23.62:2011,0,24	0/1:22,0:22:21.52:1231,0,22	0/1:16,0:16:75.28:238,0,75	0/1:4,0:4:11.31:11,0,76	0/1:9,0:7:60.02:484,0,60	1/1:19,0:18:6.02:264,6,0	0/0:18,0:18:7.34:0,7,78	0/1:17,0:17:13.90:576,0,14	0/1:15,0:15:18.93:238,0,19	0/1:24,0:24:40.22:1567,0,40	0/1:31,0:31:99:1164,0,486	0/1:17,0:16:99:1167,0,190	0/1:19,0:19:1.94:1415,0,2	0/1:5,0:4:99:485,0,135
chr10	28770175	.	CTCTCTCTCTCTCTCTCTCTCTCTACTCCTTTCTCAACT	C	27508.33	PASS	AB=0.670;AC=44;AF=0.786;AN=56;BaseQRankSum=7.306;DP=609;FS=0.000;HRun=0;HaplotypeScore=302.1579;InbreedingCoeff=0.0447;MQ=43.62;MQ0=30;MQRankSum=-2.751;QD=54.69;ReadPosRankSum=7.267;VQSLOD=2.1975;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:10,30:39:2.08:877,0,2	1/1:2,9:11:21.07:1697,21,0	0/0:39,0:16:36.10:0,36,1537	0/0:67,0:17:45.48:0,45,1702	1/1:5,17:21:6.02:519,6,0	1/1:1,13:14:12.04:1182,12,0	1/1:3,21:24:8.92:442,9,0	0/1:22,0:20:99:242,0,109	1/1:3,23:26:27.09:2636,27,0	1/1:3,20:23:40.65:2251,41,0	1/1:1,10:11:5.70:206,6,0	1/1:3,18:21:27.08:2304,27,0	1/1:0,15:15:8.31:845,8,0	1/1:0,29:29:12.04:1182,12,0	1/1:2,29:31:2.14:2316,2,0	1/1:3,19:22:2.07:1461,2,0	0/1:2,15:17:16.98:289,0,17	0/1:4,0:4:10.32:61,0,10	1/1:3,6:7:5.14:622,5,0	1/1:3,15:17:5.51:276,6,0	1/1:18,0:18:10.05:67,10,0	1/1:1,15:16:9.03:734,9,0	1/1:1,13:14:3.01:292,3,0	0/1:2,22:24:23.17:1905,0,23	0/1:7,24:31:99:1373,0,422	0/1:3,14:16:58.60:1421,0,59	1/1:1,18:19:18.06:1726,18,0	0/1:2,3:4:99:582,0,111
chr10	28770198	.	TA	T	1358.95	PASS	AB=1.000;AC=48;AF=0.889;AN=54;BaseQRankSum=8.187;DP=535;FS=2.467;HRun=1;HaplotypeScore=201.2992;InbreedingCoeff=0.4401;MQ=54.31;MQ0=24;MQRankSum=-6.531;QD=3.15;ReadPosRankSum=6.660;VQSLOD=0.0742;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:30,1:31:6.66:21,7,0	1/1:10,0:10:15.67:104,16,0	0/0:41,0:18:49.99:0,50,644	0/0:61,0:21:50.09:0,50,616	1/1:19,0:18:5.94:42,6,0	1/1:13,0:13:8.88:28,9,0	1/1:21,0:20:6.01:56,6,0	1/1:0,10:10:30.08:331,30,0	1/1:24,0:24:19.98:63,20,0	1/1:20,1:21:22.97:155,23,0	1/1:10,0:10:2.92:26,3,0	1/1:19,0:19:18.04:58,18,0	0/1:15,0:15:6.59:7,0,20	1/1:29,0:29:8.88:28,9,0	1/1:30,0:30:17.76:56,18,0	1/1:19,0:19:11.10:35,11,0	1/1:15,0:15:2.22:7,2,0	./.	1/1:6,0:6:8.23:66,8,0	1/1:15,0:15:3:28,3,0	1/1:0,11:11:0.47:1,0,0	1/1:15,0:15:8.23:61,8,0	1/1:13,0:13:2.04:6,2,0	1/1:23,1:24:16.16:69,16,0	1/1:25,0:25:13.44:92,13,0	1/1:14,0:14:18.27:117,18,0	0/1:18,0:18:2.12:21,0,2	1/1:3,1:3:4.44:14,4,0
chr10	28770202	.	CCTT	C	2594.78	PASS	AB=1.000;AC=49;AF=0.907;AN=54;BaseQRankSum=8.300;DP=530;FS=0.718;HRun=0;HaplotypeScore=204.1525;InbreedingCoeff=0.4941;MQ=55.65;MQ0=22;MQRankSum=-6.483;QD=6.06;ReadPosRankSum=6.533;VQSLOD=2.3977;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:30,1:31:8.93:63,9,0	1/1:10,0:10:17.95:165,18,0	0/0:41,0:19:51.16:0,51,1065	0/0:59,0:22:53.63:0,54,964	1/1:19,0:18:6:55,6,0	1/1:13,0:13:11.90:84,12,0	1/1:21,0:20:6.02:69,6,0	1/1:1,9:10:30.09:362,30,0	1/1:24,0:24:26.78:188,27,0	1/1:20,1:21:30.38:273,30,0	1/1:10,0:10:3.01:32,3,0	1/1:19,0:19:23.71:162,24,0	0/1:15,0:15:2.50:33,0,3	1/1:29,0:29:11.90:84,12,0	1/1:30,0:30:23.81:168,24,0	1/1:19,0:19:14.88:105,15,0	1/1:15,0:15:2.98:21,3,0	./.	1/1:6,0:6:8.99:92,9,0	1/1:15,0:15:3.01:34,3,0	1/1:1,10:11:0.47:1,0,0	1/1:15,0:15:8.99:88,9,0	1/1:13,0:13:2.97:20,3,0	1/1:22,1:23:20.86:160,21,0	1/1:24,0:24:14.97:139,15,0	1/1:14,0:14:20.74:179,21,0	1/1:18,0:18:14.88:105,15,0	1/1:3,0:3:5.95:42,6,0
chr10	28770209	.	CAACT	C	4569.39	PASS	AB=0.524;AC=49;AF=0.907;AN=54;BaseQRankSum=8.952;DP=531;FS=0.000;HRun=0;HaplotypeScore=202.2542;InbreedingCoeff=0.5331;MQ=56.86;MQ0=17;MQRankSum=-7.242;QD=10.70;ReadPosRankSum=7.218;VQSLOD=3.6493;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:30,1:31:9.02:95,9,0	1/1:10,0:10:18.05:269,18,0	0/0:39,0:22:60.21:0,60,1666	0/0:60,0:25:62.87:0,63,1302	1/1:18,0:18:6.02:105,6,0	1/1:13,0:13:12.03:127,12,0	1/1:21,0:20:6.02:117,6,0	1/1:1,9:10:30.10:584,30,0	1/1:24,0:24:27.07:285,27,0	1/1:20,1:21:42.11:633,42,0	1/1:10,0:10:2.48:56,2,0	1/1:19,0:19:24.06:261,24,0	1/1:15,0:15:5.92:63,6,0	1/1:29,0:29:12.03:127,12,0	1/1:30,0:30:24.06:253,24,0	1/1:19,0:19:15.04:158,15,0	1/1:15,0:15:3.01:32,3,0	./.	1/1:6,0:6:9.03:148,9,0	1/1:15,0:15:3.01:58,3,0	0/1:1,10:11:0:0,0,0	1/1:15,0:15:9.03:148,9,0	1/1:13,0:13:3:29,3,0	1/1:22,1:23:21.05:249,21,0	1/1:24,0:24:15.05:233,15,0	1/1:14,0:14:20.67:317,21,0	1/1:18,0:18:15.04:158,15,0	1/1:3,0:3:6.02:63,6,0
chr10	28770813	.	TCTGAGG	T	29186.77	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-0.331;DP=660;FS=26.972;HRun=0;HaplotypeScore=175.4421;InbreedingCoeff=0.9177;MQ=80.22;MQ0=0;MQRankSum=-11.542;QD=49.05;ReadPosRankSum=5.181;VQSLOD=3.2365;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,32:37:78.27:1758,78,0	1/1:1,5:6:12.04:284,12,0	0/0:34,0:34:62.82:0,63,2429	0/0:31,0:31:67.62:0,68,2093	1/1:1,11:12:20.89:463,21,0	1/1:1,17:18:45.11:1001,45,0	1/1:1,22:23:54.19:1262,54,0	1/1:3,14:17:39.13:922,39,0	1/1:2,32:34:87.30:2040,87,0	1/1:2,28:30:84.22:1841,84,0	1/1:2,13:15:30.05:615,30,0	1/1:2,32:34:66.23:1555,66,0	1/1:1,39:40:98.93:2336,99,0	1/1:3,27:30:75.26:1770,75,0	1/1:9,34:43:90.18:2043,90,0	1/1:5,39:44:90.31:2122,90,0	1/1:2,13:15:30.06:658,30,0	1/1:1,11:12:21.07:496,21,0	1/1:2,25:28:75.21:1546,75,0	1/1:1,18:19:45.11:931,45,0	1/1:4,24:28:30.49:608,30,0	1/1:1,10:11:24.08:534,24,0	1/1:2,14:16:36.08:800,36,0	1/1:4,14:18:14.91:338,15,0	1/1:2,8:10:18.06:410,18,0	1/1:5,19:24:57.18:1301,57,0	1/1:2,25:27:60.21:1413,60,0	1/1:1,3:4:6.02:142,6,0
chr10	28771296	.	CA	C	18755.45	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=7.435;DP=600;FS=2.862;HRun=3;HaplotypeScore=164.3669;InbreedingCoeff=0.9990;MQ=89.99;MQ0=0;MQRankSum=-10.779;QD=33.79;ReadPosRankSum=5.465;VQSLOD=3.7788;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,41:41:99:1375,111,0	1/1:0,12:12:30.09:372,30,0	0/0:29,0:29:81.25:0,81,1098	0/0:16,0:16:45.12:0,45,623	1/1:0,15:15:39.12:483,39,0	1/1:0,28:28:84.26:1041,84,0	1/1:0,17:17:51.16:632,51,0	1/1:0,26:26:78.16:922,78,0	1/1:1,23:24:63.20:781,63,0	1/1:3,24:27:75.20:902,75,0	1/1:0,15:15:39.12:483,39,0	1/1:0,24:24:63.20:781,63,0	1/1:0,15:15:42.13:520,42,0	1/1:1,18:19:51.16:632,51,0	1/1:0,27:27:78.25:967,78,0	1/1:0,17:17:48.15:595,48,0	1/1:0,18:18:48.15:595,48,0	1/1:0,26:26:72.23:893,72,0	1/1:1,17:18:48.15:595,48,0	1/1:1,24:25:60.17:727,60,0	1/1:0,33:33:93.29:1153,93,0	1/1:2,13:15:36.11:446,36,0	1/1:0,14:14:36.11:446,36,0	1/1:0,24:24:66.21:818,66,0	1/1:0,11:11:30.09:372,30,0	1/1:0,27:27:76.78:922,77,0	1/1:1,26:27:75.24:930,75,0	1/1:0,10:10:30.09:372,30,0
chr10	28774017	.	TTA	T	16942.23	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-1.361;DP=520;FS=2.335;HRun=0;HaplotypeScore=87.3302;InbreedingCoeff=0.9871;MQ=83.10;MQ0=1;MQRankSum=-9.566;QD=35.52;ReadPosRankSum=5.834;VQSLOD=6.5990;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,20:24:57.19:783,57,0	1/1:0,5:5:15.05:206,15,0	0/0:24,0:23:45.03:0,45,698	0/0:19,0:19:54.18:0,54,875	1/1:0,20:20:54.14:721,54,0	1/1:1,26:27:72.24:989,72,0	1/1:1,17:18:51.17:700,51,0	1/1:2,23:24:63.21:863,63,0	1/1:3,13:16:39.13:535,39,0	1/1:2,19:21:57.19:777,57,0	1/1:0,17:17:48.12:638,48,0	1/1:0,10:10:30.10:412,30,0	1/1:1,15:16:42.14:577,42,0	1/1:0,18:18:42.14:577,42,0	1/1:2,23:25:63.21:865,63,0	1/1:1,21:22:53.97:742,54,0	1/1:2,22:24:69.22:931,69,0	1/1:0,24:24:60.20:824,60,0	1/1:2,13:14:36.08:460,36,0	1/1:1,14:15:45.15:618,45,0	1/1:1,21:22:63.21:865,63,0	1/1:0,11:11:30.06:391,30,0	1/1:1,14:15:39.02:535,39,0	1/1:3,20:23:54.12:741,54,0	1/1:1,14:15:42.14:577,42,0	1/1:1,17:18:48.13:627,48,0	1/1:3,20:23:54.18:742,54,0	1/1:1,6:7:18.06:247,18,0
chr10	28774146	.	C	CTTTGT	28087.06	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-6.627;DP=590;FS=9.820;HRun=0;HaplotypeScore=100.0692;InbreedingCoeff=0.9346;MQ=71.60;MQ0=0;MQRankSum=-6.995;QD=52.50;ReadPosRankSum=4.883;VQSLOD=5.0018;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,19:23:48.16:1371,48,0	1/1:2,9:11:18.53:521,19,0	0/0:29,0:27:39.47:0,39,494	0/0:26,0:26:39.10:0,39,644	1/1:8,13:23:39.09:1039,39,0	1/1:1,15:17:45.15:1285,45,0	1/1:7,15:25:27.09:778,27,0	1/1:21,7:29:29.94:634,30,0	1/1:6,11:17:39.13:1052,39,0	1/1:6,14:19:42.12:1089,42,0	1/1:6,9:17:30.10:813,30,0	1/1:6,15:23:48.16:1385,48,0	1/1:5,17:24:48.16:1376,48,0	1/1:3,13:16:39.13:1126,39,0	1/1:7,14:22:42.14:1169,42,0	1/1:3,12:15:33.11:954,33,0	1/1:9,20:29:6.04:1545,6,0	1/1:6,15:21:48.16:1363,48,0	1/1:11,6:15:24.01:558,24,0	1/1:7,9:16:20.55:472,21,0	1/1:4,20:25:60.21:1712,60,0	1/1:3,15:19:42.10:1082,42,0	1/1:3,8:14:20.79:603,21,0	1/1:7,32:41:87.30:2386,87,0	1/1:7,11:17:18.06:520,18,0	1/1:5,18:24:57.14:1531,57,0	1/1:5,10:17:33.11:945,33,0	1/1:1,10:11:27.09:780,27,0
chr10	28774480	.	GTTTTT	G	7839.51	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=4.113;DP=359;FS=3.528;HRun=8;HaplotypeScore=181.3244;InbreedingCoeff=0.8489;MQ=47.88;MQ0=1;MQRankSum=-4.212;QD=23.97;ReadPosRankSum=3.986;VQSLOD=1.1084;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:15,6:21:55.89:489,56,0	1/1:2,1:4:11.70:121,12,0	0/0:15,0:10:24.08:0,24,524	0/0:17,0:9:20.84:0,21,272	1/1:16,4:19:49.98:397,50,0	1/1:10,10:20:59.80:691,60,0	1/1:10,6:16:35.42:293,35,0	1/1:12,0:12:18.54:156,19,0	1/1:8,2:10:29.35:236,29,0	1/1:10,9:19:54.01:590,54,0	1/1:10,2:13:34.98:300,35,0	1/1:0,3:3:9.03:144,9,0	1/1:3,6:9:20.90:265,21,0	1/1:5,6:11:29.81:371,30,0	1/1:8,5:13:35.31:360,35,0	1/1:6,6:12:32.77:384,33,0	1/1:15,0:15:32.15:220,32,0	1/1:4,4:8:23.77:235,24,0	1/1:9,4:13:32.83:351,33,0	1/1:8,2:10:23.92:234,24,0	1/1:14,0:14:20.52:131,21,0	1/1:10,5:15:26.46:200,26,0	1/1:4,1:5:8.75:77,9,0	1/1:6,1:7:8.90:62,9,0	1/1:7,6:12:32.61:352,33,0	1/1:11,6:17:50.78:542,51,0	1/1:9,11:20:53.12:605,53,0	1/1:5,2:6:6.72:33,7,0
chr10	28774489	.	GTTTTGTTTTGTTTTGTT	G	16425.72	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=4.092;DP=317;FS=3.818;HRun=0;HaplotypeScore=209.3296;InbreedingCoeff=0.7517;MQ=44.82;MQ0=1;MQRankSum=-1.743;QD=58.66;ReadPosRankSum=3.811;VQSLOD=4.4684;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,6:17:37.04:1077,37,0	1/1:3,1:4:12.04:349,12,0	0/0:18,0:9:21.07:0,21,719	0/0:19,0:9:17.74:0,18,350	1/1:15,4:18:32.28:600,32,0	1/1:9,8:18:42.68:1414,43,0	1/1:6,6:13:33.47:550,33,0	1/1:9,0:9:17.48:192,17,0	1/1:7,1:10:24.21:452,24,0	1/1:10,9:19:52.99:1451,53,0	1/1:7,2:11:25.02:648,25,0	1/1:0,3:3:9.03:396,9,0	1/1:3,6:9:21.33:739,21,0	1/1:4,6:10:29.70:976,30,0	1/1:7,5:12:30.31:845,30,0	1/1:3,6:9:26.88:890,27,0	1/1:10,0:11:14.79:216,15,0	1/1:3,4:8:20.96:613,21,0	1/1:6,4:11:18.20:739,18,0	1/1:6,2:8:6.96:264,7,0	1/1:10,0:10:6.33:64,6,0	1/1:6,5:12:26.79:339,27,0	1/1:2,1:3:6.49:175,6,0	1/1:3,1:6:5.91:40,6,0	1/1:5,6:10:21.54:747,22,0	1/1:7,6:13:27.24:834,27,0	1/1:8,11:19:51.15:1619,51,0	1/1:3,2:4:9.03:199,9,0
chr10	28774491	.	TTTG	T	7648.69	PASS	AB=0.917;AC=52;AF=0.929;AN=56;BaseQRankSum=2.932;DP=309;FS=0.000;HRun=0;HaplotypeScore=154.6530;InbreedingCoeff=0.4881;MQ=46.56;MQ0=2;MQRankSum=-2.281;QD=26.37;ReadPosRankSum=3.285;VQSLOD=4.8156;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,7:17:42.09:558,42,0	1/1:2,2:4:11.99:142,12,0	0/0:19,0:9:21.04:0,21,368	0/1:20,0:10:2.24:2,0,178	1/1:8,8:15:30.10:451,30,0	1/1:15,2:17:47.92:488,48,0	1/1:9,4:13:26.45:359,26,0	1/1:2,6:8:18.01:269,18,0	1/1:4,5:10:30.08:410,30,0	1/1:9,9:18:53.99:688,54,0	1/1:8,3:11:30:352,30,0	1/1:3,0:3:8.95:66,9,0	1/1:6,3:9:10.89:186,11,0	1/1:8,2:10:29.96:317,30,0	1/1:7,5:12:36:426,36,0	1/1:7,2:9:26.95:283,27,0	1/1:6,4:10:18.04:269,18,0	1/1:6,1:7:12.35:208,12,0	1/1:10,1:10:23.98:241,24,0	1/1:6,1:7:11.98:108,12,0	1/1:2,8:10:14.95:184,15,0	1/1:8,3:11:21.04:291,21,0	1/1:1,2:3:9.03:119,9,0	1/1:5,1:6:5.95:42,6,0	1/1:9,2:10:23.98:250,24,0	1/1:9,4:13:32.98:351,33,0	1/1:12,7:19:47.94:549,48,0	0/1:4,1:4:16.91:40,0,17
chr10	28774498	.	T	TA	484.77	PASS	AB=0.976;AC=25;AF=0.446;AN=56;BaseQRankSum=-3.771;DP=286;FS=3.480;HRun=0;HaplotypeScore=158.9118;InbreedingCoeff=-0.1792;MQ=45.32;MQ0=7;MQRankSum=-1.028;QD=2.30;ReadPosRankSum=-3.851;VQSLOD=2.4109;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:14,1:15:4.81:89,0,5	0/1:5,0:5:1.33:21,0,1	0/0:25,0:10:24:0,24,275	0/1:27,0:11:15.27:15,0,81	1/1:13,0:12:3.08:36,3,0	0/0:12,0:14:1.99:0,2,45	1/1:10,0:10:1.18:39,1,0	0/1:7,0:7:13.10:35,0,13	0/1:8,0:8:2.14:39,0,2	0/1:19,0:19:43.20:43,0,46	0/1:7,1:8:13.17:13,0,22	0/0:3,0:3:6.96:0,7,23	0/0:9,0:9:14.20:0,14,45	0/0:9,0:10:4.49:0,4,36	0/1:10,0:10:8.01:45,0,8	0/1:8,0:8:13.66:14,0,22	1/1:6,0:6:11.12:71,11,0	0/1:7,0:7:16.06:20,0,16	0/1:9,1:8:18.22:19,0,18	0/0:4,0:4:4.59:0,5,15	0/1:7,0:7:6.46:6,0,18	0/1:9,0:9:3.29:28,0,3	1/1:3,0:3:2.01:14,2,0	0/1:5,1:6:0:0,0,0	0/1:8,0:7:11.72:12,0,15	0/0:10,0:10:15.44:0,15,49	0/1:19,0:19:25.09:68,0,25	0/1:5,0:4:5.47:5,0,16
chr10	28774503	.	T	TAA	659.11	PASS	AB=0.986;AC=22;AF=0.393;AN=56;BaseQRankSum=-3.628;DP=271;FS=41.801;HRun=0;HaplotypeScore=161.2512;InbreedingCoeff=-0.3893;MQ=50.89;MQ0=7;MQRankSum=-2.204;QD=3.51;ReadPosRankSum=-1.448;VQSLOD=1.3808;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:14,1:15:12.92:165,0,13	0/1:4,0:5:3.26:34,0,3	0/0:29,0:10:23.98:0,24,372	0/0:29,0:11:21.24:0,21,180	0/1:16,0:15:15.35:72,0,15	0/1:12,0:12:4.95:5,0,59	0/1:10,0:10:41.42:41,0,53	0/1:6,0:6:15.69:42,0,16	1/1:4,0:4:7.51:36,8,0	0/1:15,0:15:67.08:67,0,87	0/1:6,1:7:7.08:28,0,7	0/0:3,0:3:8.44:0,8,40	0/0:6,0:6:15.06:0,15,72	0/1:9,0:9:2.55:3,0,45	0/1:10,0:10:17.60:61,0,18	0/1:8,0:8:24.93:33,0,25	0/1:6,0:6:17.09:39,0,17	0/1:5,0:5:9.21:9,0,43	0/1:9,1:8:25.37:29,0,25	0/0:2,0:2:5.49:0,5,25	0/1:5,0:5:8.99:9,0,27	0/1:6,0:6:0.55:1,0,46	0/1:3,0:3:10.72:15,0,11	0/0:5,1:6:5.15:0,5,24	0/1:10,0:9:21.33:21,0,41	0/0:7,0:7:8.73:0,9,55	0/1:20,0:20:85.06:99,0,85	0/1:6,0:5:1:1,0,83
chr10	28774504	.	GTT	G	3610.25	PASS	AB=0.967;AC=44;AF=0.786;AN=56;BaseQRankSum=5.107;DP=298;FS=3.290;HRun=6;HaplotypeScore=153.2255;InbreedingCoeff=0.0676;MQ=49.61;MQ0=7;MQRankSum=0.406;QD=15.23;ReadPosRankSum=5.521;VQSLOD=-0.0290;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:16,0:17:4.67:118,0,5	1/1:6,0:6:8.97:73,9,0	0/0:30,0:10:5.91:0,6,271	0/0:30,0:11:20.17:0,20,160	1/1:17,1:17:3.85:198,4,0	1/1:11,1:12:32.92:292,33,0	0/1:10,0:10:22.53:175,0,23	0/1:6,1:7:29.58:76,0,30	1/1:5,0:5:6:54,6,0	1/1:15,1:16:4.76:273,5,0	0/1:7,0:8:13.47:62,0,13	1/1:4,0:4:9:81,9,0	1/1:6,0:6:17.98:166,18,0	1/1:9,1:9:23.85:213,24,0	1/1:12,0:12:18:172,18,0	1/1:9,0:9:4.36:137,4,0	0/1:9,1:10:23.68:86,0,24	0/1:6,0:6:14.89:98,0,15	1/1:10,0:9:8.37:123,8,0	1/1:2,0:2:6:54,6,0	0/1:6,0:6:1.27:6,0,1	1/1:6,0:6:12.03:145,12,0	1/1:5,0:5:6:62,6,0	1/1:5,2:8:11.55:127,12,0	1/1:11,0:10:10.39:189,10,0	1/1:7,0:7:18.02:167,18,0	0/1:18,1:19:16.88:324,0,17	1/1:5,1:5:12:140,12,0
chr10	28774533	.	C	CT	2490.07	PASS	AB=0.788;AC=41;AF=0.732;AN=56;BaseQRankSum=-3.084;DP=512;FS=0.632;HRun=16;HaplotypeScore=171.2575;InbreedingCoeff=-0.2181;MQ=62.91;MQ0=6;MQRankSum=-1.247;QD=5.39;ReadPosRankSum=1.134;VQSLOD=0.9077;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:21,3:24:0.02:67,0,0	0/1:5,3:8:13.91:69,0,14	0/0:49,0:20:10.76:0,11,77	0/1:30,1:14:14.95:15,0,17	1/1:13,11:25:10.10:165,10,0	1/1:12,9:22:6.86:122,7,0	0/1:12,7:20:9.50:115,0,9	0/1:15,14:29:8.12:153,0,8	0/1:4,6:10:4.86:53,0,5	0/1:17,4:21:8.81:112,0,9	1/1:3,4:8:2.88:94,3,0	1/1:5,8:13:17.95:142,18,0	0/1:14,1:16:1.92:64,0,2	1/1:9,7:15:4.15:122,4,0	0/1:12,9:21:29.27:75,0,29	1/1:3,7:12:23.17:165,23,0	1/1:14,5:24:10.30:204,10,0	1/1:8,4:17:6.69:116,7,0	1/1:18,5:25:9.15:172,9,0	1/1:4,5:9:3.98:106,4,0	0/1:8,3:11:19.36:29,0,19	1/1:4,7:11:5.95:43,6,0	1/1:4,3:7:5.99:48,6,0	0/1:13,2:15:11.40:11,0,50	1/1:10,8:19:0.28:111,0,0	1/1:11,8:19:14.37:138,14,0	0/1:19,2:21:24.88:68,0,25	0/1:3,3:6:18.55:57,0,19
chr10	28775065	.	A	ATC	31415.68	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-9.453;DP=678;FS=1.245;HRun=0;HaplotypeScore=67.2925;InbreedingCoeff=0.9826;MQ=85.62;MQ0=4;MQRankSum=-10.808;QD=49.79;ReadPosRankSum=5.856;VQSLOD=5.8993;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,43:45:99:2202,114,0	1/1:0,10:9:24.08:463,24,0	0/0:23,0:23:60.16:0,60,780	0/0:24,0:24:66.18:0,66,919	1/1:0,33:32:72.25:1389,72,0	1/1:3,24:27:54.19:1043,54,0	1/1:1,23:25:60.21:1158,60,0	1/1:1,28:30:87.24:1564,87,0	1/1:1,26:27:78.27:1502,78,0	1/1:2,12:13:33.11:637,33,0	1/1:0,10:10:27.09:521,27,0	1/1:2,26:28:81.28:1555,81,0	1/1:1,23:24:60.21:1154,60,0	1/1:2,17:20:51.17:981,51,0	1/1:1,34:34:96.33:1849,96,0	1/1:0,30:29:90.31:1733,90,0	1/1:0,37:37:90.31:1739,90,0	1/1:1,23:24:66.23:1268,66,0	1/1:1,22:23:66.23:1263,66,0	1/1:3,17:20:45.15:868,45,0	1/1:0,40:40:99:2028,105,0	1/1:0,23:23:60.21:1151,60,0	1/1:0,14:14:36.12:694,36,0	1/1:2,28:30:81.28:1564,81,0	1/1:2,14:16:42.14:810,42,0	1/1:0,23:24:66.22:1243,66,0	1/1:2,16:18:41.95:804,42,0	1/1:0,4:4:12.04:232,12,0
chr10	28775878	.	T	TC	3342.19	PASS	AB=1.000;AC=51;AF=0.944;AN=54;BaseQRankSum=0.556;DP=167;FS=8.031;HRun=7;HaplotypeScore=43.1209;InbreedingCoeff=0.3615;MQ=68.56;MQ0=0;MQRankSum=-1.229;QD=20.89;ReadPosRankSum=1.683;VQSLOD=2.7068;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,8:13:24.07:289,24,0	1/1:0,3:3:6.02:72,6,0	0/0:7,0:6:12.01:0,12,116	0/1:5,0:3:2.19:2,0,3	1/1:0,3:3:6.02:72,6,0	1/1:0,1:1:3.01:36,3,0	1/1:6,4:11:18:184,18,0	1/1:2,5:7:15.05:181,15,0	1/1:0,4:4:12.03:134,12,0	1/1:3,3:6:9.03:109,9,0	1/1:1,2:3:6.02:72,6,0	1/1:1,7:8:18.05:216,18,0	1/1:5,2:7:8.99:93,9,0	1/1:2,7:10:21.06:253,21,0	1/1:1,1:2:2.93:36,3,0	1/1:2,3:6:12.04:144,12,0	1/1:6,4:11:15.04:174,15,0	1/1:1,2:3:6.02:72,6,0	1/1:1,2:3:6.02:72,6,0	./.	1/1:5,9:14:18.06:217,18,0	1/1:1,3:4:9.03:109,9,0	1/1:2,3:5:9.03:109,9,0	1/1:4,4:8:12.04:145,12,0	1/1:2,5:7:12.04:145,12,0	1/1:0,2:2:6.02:72,6,0	1/1:2,5:7:15.02:150,15,0	1/1:2,5:7:15.05:181,15,0
chr10	28776723	.	TTTG	T	16368.29	PASS	AB=0.556;AC=51;AF=0.911;AN=56;BaseQRankSum=1.926;DP=614;FS=2.827;HRun=0;HaplotypeScore=157.8564;InbreedingCoeff=0.7660;MQ=63.07;MQ0=0;MQRankSum=-3.944;QD=28.08;ReadPosRankSum=5.356;VQSLOD=5.2045;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:6,24:30:21.83:789,0,22	1/1:2,7:9:11.95:128,12,0	0/0:14,0:13:20.24:0,20,415	0/0:17,0:16:39.12:0,39,642	1/1:5,13:18:26.96:336,27,0	1/1:5,13:18:30.03:414,30,0	1/1:2,22:24:54.18:792,54,0	1/1:13,27:40:81.18:1057,81,0	1/1:2,16:18:42.03:565,42,0	1/1:4,20:24:57.14:794,57,0	1/1:1,21:22:54:694,54,0	1/1:6,14:20:39.13:572,39,0	1/1:3,21:24:54.18:791,54,0	1/1:3,19:22:54.07:741,54,0	1/1:6,27:33:63.03:847,63,0	1/1:2,23:25:60.10:830,60,0	1/1:5,27:32:56.82:835,57,0	1/1:5,18:23:48.05:655,48,0	1/1:5,10:15:30.02:393,30,0	1/1:2,14:16:32.96:431,33,0	1/1:4,16:20:33.02:435,33,0	1/1:5,22:27:59.68:658,60,0	1/1:1,11:12:24.38:278,24,0	1/1:2,20:22:51.17:748,51,0	1/1:6,12:18:30.06:416,30,0	1/1:9,21:30:60.16:813,60,0	1/1:4,27:31:72.14:1007,72,0	1/1:2,8:10:24.08:352,24,0
chr10	28776901	.	A	AT	1272.31	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-8.877;DP=692;FS=0.000;HRun=9;HaplotypeScore=149.1981;InbreedingCoeff=0.9255;MQ=76.25;MQ0=1;MQRankSum=-1.833;QD=21.56;ReadPosRankSum=-0.582;VQSLOD=1.8663;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,138,1192	0/0:8,0:8:20.99:0,21,182	0/0:26,0:22:4.12:0,4,232	0/0:24,1:20:38.44:0,38,338	0/0:32,0:32:71.95:0,72,625	0/0:14,0:14:41.99:0,42,365	0/0:21,0:22:53.02:0,53,449	0/0:30,1:32:43.82:0,44,598	0/0:20,0:20:53.98:0,54,469	0/0:28,0:28:68.98:0,69,599	0/0:23,0:23:65.97:0,66,569	0/0:24,0:24:62.97:0,63,547	0/0:28,0:28:80.97:0,81,700	0/0:31,0:31:74.92:0,75,644	0/0:21,0:21:59.98:0,60,518	0/0:26,0:26:71.97:0,72,620	1/1:3,33:36:87.24:962,87,0	1/1:6,17:23:39.11:431,39,0	0/0:20,0:21:53.01:0,53,446	0/0:19,0:20:55.97:0,56,465	0/0:15,0:15:44.93:0,45,383	0/0:20,0:20:56.97:0,57,491	0/0:28,0:28:71.95:0,72,620	0/0:36,0:36:92.95:0,93,803	0/0:22,0:22:65.94:0,66,566	0/0:31,0:31:77.46:0,77,661	0/0:19,0:19:47.99:0,48,416	0/0:7,0:7:20.95:0,21,173
chr10	28778136	.	C	CAACAAACAAACA	32671.13	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-9.905;DP=889;FS=11.411;HRun=0;HaplotypeScore=252.1268;InbreedingCoeff=0.9267;MQ=50.64;MQ0=4;MQRankSum=-6.578;QD=42.43;ReadPosRankSum=-1.108;VQSLOD=3.0505;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:13,11:28:27.04:1062,27,0	1/1:7,4:11:6.02:353,6,0	0/0:24,0:18:11.67:0,12,311	0/0:33,0:27:31.48:0,31,617	1/1:22,12:40:35.95:1181,36,0	1/1:11,18:33:33.11:1941,33,0	1/1:11,0:16:12.04:372,12,0	1/1:27,0:38:42.10:926,42,0	1/1:11,14:31:30.22:1763,30,0	1/1:14,16:35:57.18:2083,57,0	1/1:9,10:23:27.01:971,27,0	1/1:6,17:26:24.08:1411,24,0	1/1:17,17:39:33.11:1937,33,0	1/1:16,19:36:30.10:1763,30,0	1/1:18,17:42:30.10:1764,30,0	1/1:23,18:46:24.08:1412,24,0	0/0:9,0:35:45.97:0,46,1786	0/0:8,0:27:35.50:0,36,1041	1/1:15,7:26:40.38:1289,40,0	1/1:21,20:43:30.10:1362,30,0	1/1:19,0:28:37.67:1373,38,0	1/1:13,15:32:39.04:1441,39,0	1/1:22,12:39:10.13:376,10,0	1/1:18,8:29:12.04:690,12,0	1/1:9,18:28:33.11:1940,33,0	1/1:24,16:43:60.21:2969,60,0	1/1:12,20:36:24.08:1411,24,0	1/1:3,5:13:15.05:883,15,0
chr10	28778358	.	AAC	A	2650.52	PASS	AB=1.000;AC=45;AF=0.804;AN=56;BaseQRankSum=2.742;DP=721;FS=1.860;HRun=0;HaplotypeScore=168.5236;InbreedingCoeff=0.5287;MQ=63.35;MQ0=7;MQRankSum=-0.078;QD=4.42;ReadPosRankSum=5.809;VQSLOD=2.8861;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:29:7.42:76,7,0	0/1:16,0:16:26.31:26,0,28	0/0:39,0:20:44.70:0,45,645	0/0:38,0:22:20.26:0,20,495	1/1:32,0:32:45.72:202,46,0	1/1:25,0:24:5.45:68,5,0	1/1:19,0:19:25.75:80,26,0	1/1:26,2:28:19:210,19,0	1/1:24,2:26:7.37:134,7,0	1/1:29,0:28:12.68:189,13,0	1/1:23,0:23:27.66:113,28,0	1/1:26,0:25:33.28:94,33,0	1/1:17,0:17:16.27:102,16,0	1/1:27,0:27:4.99:50,5,0	1/1:24,0:24:17:73,17,0	1/1:32,0:32:15.26:143,15,0	0/0:25,0:25:3.58:0,4,291	0/0:20,0:19:17.88:0,18,229	0/1:22,0:22:36.42:167,0,36	1/1:24,1:24:21.60:107,22,0	1/1:12,0:12:18.81:90,19,0	0/1:26,0:26:12.65:87,0,13	1/1:28,0:28:36.36:131,36,0	1/1:25,0:25:8.27:63,8,0	1/1:25,2:27:16.02:131,16,0	1/1:33,1:34:44.61:273,45,0	1/1:27,1:28:26.86:141,27,0	1/1:18,0:18:25.12:69,25,0
chr10	28778359	.	AC	A	15804.87	PASS	AB=0.956;AC=50;AF=0.893;AN=56;BaseQRankSum=-8.575;DP=714;FS=2.829;HRun=2;HaplotypeScore=111.3262;InbreedingCoeff=0.6168;MQ=63.40;MQ0=7;MQRankSum=2.182;QD=24.81;ReadPosRankSum=0.699;VQSLOD=4.5944;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,26:29:60.02:806,60,0	1/1:0,14:14:27.09:348,27,0	0/0:38,0:19:35.47:0,35,451	0/0:36,1:22:13.93:0,14,394	1/1:0,32:32:83.96:950,84,0	1/1:4,20:24:40.85:575,41,0	1/1:0,19:19:38.96:478,39,0	1/1:3,25:28:75.76:783,76,0	1/1:4,22:26:44.17:602,44,0	1/1:2,26:27:72.13:799,72,0	1/1:1,22:23:57.01:675,57,0	1/1:1,25:25:52.98:658,53,0	1/1:5,13:18:47.94:596,48,0	1/1:0,26:26:51.08:624,51,0	1/1:1,23:24:44.20:615,44,0	1/1:3,29:32:52.37:663,52,0	0/1:23,1:24:56.38:129,0,56	0/1:19,1:19:46.40:46,0,54	1/1:11,10:21:45.36:579,45,0	1/1:2,23:24:57.39:738,57,0	1/1:6,7:13:39.05:422,39,0	1/1:2,24:26:51.86:673,52,0	1/1:0,28:28:52.88:628,53,0	1/1:1,23:24:48.16:619,48,0	1/1:3,24:27:36.09:453,36,0	1/1:2,31:33:90.59:1031,91,0	1/1:1,26:27:66.11:815,66,0	1/1:0,18:18:39.13:500,39,0
chr10	28779350	.	CTGATGATGA	C	15302.82	PASS	AB=0.649;AC=50;AF=0.926;AN=54;BaseQRankSum=1.809;DP=636;FS=0.000;HRun=0;HaplotypeScore=220.2341;InbreedingCoeff=0.2745;MQ=54.74;MQ0=9;MQRankSum=-2.887;QD=25.59;ReadPosRankSum=0.256;VQSLOD=4.1026;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:22,15:37:33.11:719,33,0	1/1:5,6:11:12.04:327,12,0	0/0:23,0:11:3.01:0,3,48	./.	1/1:8,12:20:24.08:426,24,0	1/1:6,11:17:33.11:787,33,0	1/1:20,11:31:18.06:463,18,0	1/1:26,0:24:6.02:110,6,0	1/1:12,9:21:24.08:585,24,0	1/1:15,13:28:33.10:779,33,0	1/1:6,10:16:24.08:564,24,0	1/1:14,12:26:30.10:773,30,0	1/1:8,14:22:27.09:732,27,0	1/1:12,8:20:24.08:613,24,0	1/1:16,21:37:54.18:1385,54,0	0/1:17,18:35:55.15:1230,0,55	1/1:7,0:11:6.02:126,6,0	1/1:9,0:18:18.06:377,18,0	1/1:14,8:22:24.06:524,24,0	1/1:7,5:12:9.03:159,9,0	1/1:15,6:21:15.05:234,15,0	0/1:13,0:30:8.64:9,0,52	1/1:8,11:19:27.09:601,27,0	1/1:21,15:36:9.03:231,9,0	1/1:4,13:17:30.10:746,30,0	1/1:6,16:22:51.15:1226,51,0	1/1:19,16:35:51.17:1332,51,0	1/1:4,4:8:9.03:245,9,0
chr10	28782391	.	TAC	T	1026.54	PASS	AB=0.925;AC=39;AF=0.929;AN=42;BaseQRankSum=1.181;DP=566;FS=3.424;HRun=0;HaplotypeScore=80.8382;InbreedingCoeff=-0.0364;MQ=67.48;MQ0=10;MQRankSum=-1.102;QD=2.74;ReadPosRankSum=-0.157;VQSLOD=1.9350;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:34,3:37:25.79:26,0,38	./.	./.	./.	1/1:14,7:22:9.15:66,9,0	0/0:17,0:17:0.47:0,0,1	1/1:24,2:26:6.01:64,6,0	./.	1/1:14,2:17:5.43:45,5,0	1/1:13,0:13:3:32,3,0	1/1:10,3:13:3:32,3,0	1/1:21,1:22:5.85:46,6,0	1/1:9,1:11:5.85:46,6,0	1/1:12,2:14:3.01:32,3,0	1/1:16,0:16:3.01:32,3,0	1/1:14,2:15:5.22:39,5,0	1/1:23,2:29:11.69:92,12,0	1/1:11,2:16:14.70:124,15,0	1/1:10,0:8:3:26,3,0	1/1:13,0:13:2.59:10,3,0	./.	1/1:15,6:21:3:32,3,0	1/1:16,0:18:3:32,3,0	1/1:21,11:33:26.82:268,27,0	1/1:17,0:18:5.83:38,6,0	./.	./.	1/1:6,2:8:3.01:32,3,0
chr10	28783303	.	CTCTG	C	8272.77	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-5.390;DP=591;FS=1.812;HRun=0;HaplotypeScore=105.7415;InbreedingCoeff=0.7342;MQ=75.81;MQ0=10;MQRankSum=3.106;QD=16.95;ReadPosRankSum=1.278;VQSLOD=4.7204;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,25:30:42.14:650,42,0	1/1:0,4:4:6.02:95,6,0	0/0:40,0:31:3.01:0,3,48	0/0:32,0:25:0.07:0,0,35	1/1:6,9:16:21.07:310,21,0	1/1:2,14:16:27.09:416,27,0	1/1:13,14:27:15.05:237,15,0	1/1:24,0:21:2.55:39,3,0	1/1:10,14:25:27.09:414,27,0	1/1:10,10:20:30.10:458,30,0	1/1:1,7:8:12.04:179,12,0	1/1:7,11:18:21.07:331,21,0	1/1:11,11:22:21.07:319,21,0	1/1:8,12:20:21.07:331,21,0	1/1:10,21:31:42.14:663,42,0	1/1:5,17:22:38.88:615,39,0	0/0:18,0:18:39.13:0,39,776	0/0:13,0:12:15.93:0,16,507	1/1:14,3:14:9.03:142,9,0	1/1:6,11:17:18.06:284,18,0	1/1:23,23:46:24.08:379,24,0	1/1:4,8:12:12.04:189,12,0	1/1:5,11:16:18.06:284,18,0	1/1:14,22:36:54.18:852,54,0	1/1:3,8:11:15.05:237,15,0	1/1:9,7:16:18.06:280,18,0	1/1:8,14:22:23.91:379,24,0	1/1:6,6:12:12.04:189,12,0
chr10	28793237	.	T	TTCTC	17717.97	PASS	AB=0.941;AC=51;AF=0.911;AN=56;BaseQRankSum=3.035;DP=710;FS=60.437;HRun=0;HaplotypeScore=197.9089;InbreedingCoeff=0.8027;MQ=52.27;MQ0=12;MQRankSum=-2.849;QD=29.48;ReadPosRankSum=4.834;VQSLOD=2.1431;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:32,5:35:58.62:1005,59,0	1/1:5,1:7:15:277,15,0	0/0:56,0:27:21.57:0,22,355	0/0:52,0:20:7.57:0,8,237	1/1:24,3:24:50.97:762,51,0	1/1:19,2:19:47.89:672,48,0	1/1:18,0:17:29.45:436,29,0	1/1:43,0:33:16.83:847,17,0	1/1:15,3:17:23.40:414,23,0	1/1:30,2:26:56.30:732,56,0	1/1:15,5:18:53.99:898,54,0	1/1:32,2:29:61.28:947,61,0	1/1:19,3:21:51.13:926,51,0	1/1:24,2:25:58.08:990,58,0	1/1:27,3:29:63.53:1192,64,0	1/1:35,3:36:77.11:1222,77,0	1/1:13,2:15:30.02:408,30,0	0/1:15,0:15:0.47:306,0,0	1/1:23,0:21:37.06:477,37,0	1/1:14,2:15:32.18:474,32,0	1/1:12,0:9:15.17:191,15,0	1/1:19,3:20:39.48:894,39,0	1/1:19,3:20:41.28:690,41,0	1/1:17,0:15:17.85:325,18,0	1/1:14,6:19:48.01:891,48,0	1/1:26,3:23:45.73:892,46,0	1/1:16,4:20:35.97:604,36,0	1/1:8,1:7:15.05:247,15,0
chr10	28793249	.	T	TCTTTCTCTCTCTC	26335.08	PASS	AB=0.938;AC=38;AF=0.679;AN=56;BaseQRankSum=1.079;DP=684;FS=8.825;HRun=0;HaplotypeScore=244.7403;InbreedingCoeff=-0.0727;MQ=42.56;MQ0=14;MQRankSum=1.355;QD=45.33;ReadPosRankSum=7.619;VQSLOD=2.8328;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:32,3:33:47.43:1947,47,0	1/1:4,1:5:13.29:614,13,0	0/0:44,0:18:26.50:0,26,589	0/0:58,0:19:18.64:0,19,355	0/1:20,5:22:3.67:1323,0,4	0/1:18,1:17:41.51:751,0,42	0/1:16,0:14:0.09:67,0,0	0/1:40,0:30:29.95:270,0,30	0/1:15,1:14:1.17:854,0,1	1/1:33,0:26:33.37:1111,33,0	1/1:19,2:20:3.56:1465,4,0	0/1:30,4:29:37.05:1662,0,37	1/1:19,1:19:11.76:952,12,0	0/1:22,5:26:11.55:1831,0,12	1/1:29,3:30:17.30:1753,17,0	0/1:34,4:37:11.68:1829,0,12	0/1:15,0:15:2.98:403,0,3	0/1:14,0:13:14.81:251,0,15	0/1:22,1:21:38.83:775,0,39	0/1:16,0:14:4.05:973,0,4	1/1:10,1:8:3.76:160,4,0	1/1:17,5:21:31.25:1599,31,0	1/1:18,1:17:16.83:1137,17,0	1/1:16,0:14:21.87:543,22,0	1/1:20,1:19:13.06:1546,13,0	1/1:25,3:22:14.98:1354,15,0	0/1:17,1:18:9.30:1007,0,9	0/1:10,0:7:3.89:159,0,4
chr10	28793270	.	T	TC	2327.72	PASS	AB=0.853;AC=25;AF=0.446;AN=56;BaseQRankSum=8.096;DP=601;FS=4.402;HRun=1;HaplotypeScore=172.2086;InbreedingCoeff=-0.7785;MQ=44.30;MQ0=18;MQRankSum=-7.769;QD=4.73;ReadPosRankSum=-0.200;VQSLOD=0.1039;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:25,6:29:99:170,0,287	0/1:3,2:5:31.37:65,0,31	0/0:38,0:12:26.32:0,26,293	0/0:43,0:8:8.18:0,8,92	0/1:19,4:21:99:208,0,180	0/1:12,3:13:85.66:86,0,228	0/1:15,0:13:8.89:9,0,288	0/0:27,1:20:57.14:0,57,653	0/1:18,4:20:99:106,0,322	0/1:28,2:23:22.97:23,0,400	0/1:15,6:19:99:185,0,190	0/1:28,2:25:62.34:62,0,384	0/1:10,3:12:59.84:124,0,60	0/1:26,3:27:75.56:76,0,367	0/1:23,6:28:99:251,0,285	0/1:25,3:26:38.81:39,0,429	0/1:11,2:13:41.82:42,0,273	0/1:10,3:12:57.49:57,0,221	0/1:20,2:19:63.82:64,0,276	0/1:9,4:12:99:168,0,117	0/1:6,1:4:0.14:0,0,90	0/1:23,3:24:84.13:84,0,283	0/1:17,2:17:99:110,0,159	0/1:13,0:11:20.93:21,0,147	0/1:8,8:15:56.73:322,0,57	0/1:22,4:20:64.13:64,0,311	0/1:13,4:16:99:115,0,114	0/1:9,1:6:30.59:31,0,98
chr10	28794840	.	GAAC	G	1177.65	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.296;DP=646;FS=2.546;HRun=0;HaplotypeScore=87.1220;InbreedingCoeff=0.9818;MQ=82.01;MQ0=0;MQRankSum=-3.815;QD=33.65;ReadPosRankSum=2.617;VQSLOD=4.1481;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:54.15:0,54,1135	0/0:4,0:4:12.04:0,12,272	0/0:21,0:21:53.38:0,53,1269	0/0:19,0:19:53.85:0,54,1002	0/0:42,0:42:99:0,120,2562	0/0:26,0:26:78.25:0,78,1724	0/0:11,0:11:30.10:0,30,680	0/0:30,0:30:84.27:0,84,1820	0/0:30,0:30:87.28:0,87,1925	0/0:25,0:25:72.24:0,72,1593	0/0:21,0:21:63.21:0,63,1385	0/0:32,0:32:90.31:0,90,2018	0/0:27,0:27:81.28:0,81,1833	0/0:16,0:16:48.16:0,48,1086	0/0:24,0:24:66.23:0,66,1477	0/0:22,0:21:66.23:0,66,1477	1/1:1,23:24:57.19:949,57,0	1/1:2,9:11:21.07:349,21,0	0/0:14,0:14:39.13:0,39,883	0/0:18,0:18:54.17:0,54,1179	0/0:11,0:11:33.11:0,33,748	0/0:18,0:18:48.16:0,48,1068	0/0:29,0:29:87.26:0,87,1888	0/0:15,0:15:45.15:0,45,1019	0/0:37,0:37:99:0,102,2180	0/0:38,0:38:99:0,108,2426	0/0:48,0:48:99:0,141,3129	0/0:15,0:15:42.14:0,42,950
chr10	28796709	.	TC	T	3452.07	PASS	AB=0.978;AC=49;AF=0.875;AN=56;BaseQRankSum=-0.145;DP=508;FS=16.816;HRun=1;HaplotypeScore=76.0453;InbreedingCoeff=0.5007;MQ=44.73;MQ0=29;MQRankSum=-0.077;QD=7.49;ReadPosRankSum=-0.276;VQSLOD=-0.6390;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:32,0:30:56.56:339,57,0	1/1:4,0:4:3.38:12,3,0	0/1:43,1:7:9.91:10,0,51	0/1:41,2:12:3.61:4,0,65	1/1:26,0:25:36.23:187,36,0	1/1:23,0:23:36.37:223,36,0	1/1:13,0:12:19.50:90,20,0	1/1:28,1:28:32.55:235,33,0	1/1:9,0:8:16.77:87,17,0	1/1:19,1:18:16.47:139,16,0	1/1:13,0:13:28.76:168,29,0	1/1:7,1:7:17.22:108,17,0	1/1:7,0:7:13.24:76,13,0	1/1:7,1:8:14.05:94,14,0	1/1:20,0:19:19.89:177,20,0	1/1:10,1:11:0.22:71,0,0	0/0:27,0:26:57.57:0,58,477	0/0:20,0:20:38.62:0,39,379	1/1:27,0:26:61.66:399,62,0	1/1:14,2:14:27.50:179,28,0	1/1:6,0:3:8.87:57,9,0	0/1:8,0:8:2.69:53,0,3	1/1:11,0:11:19.10:89,19,0	1/1:7,0:6:7.85:40,8,0	1/1:13,0:13:26.62:131,27,0	1/1:25,0:24:47.86:313,48,0	1/1:26,0:24:11.76:100,12,0	1/1:12,0:5:13.41:74,13,0
chr10	28796717	.	TTTTC	T	2941.71	PASS	AB=1.000;AC=43;AF=0.768;AN=56;BaseQRankSum=-3.153;DP=520;FS=50.177;HRun=0;HaplotypeScore=90.6561;InbreedingCoeff=-0.0279;MQ=40.81;MQ0=47;MQRankSum=-2.499;QD=6.63;ReadPosRankSum=0.122;VQSLOD=0.2018;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:30,1:28:7.17:222,7,0	1/1:4,0:3:2.04:7,2,0	0/0:34,0:2:2.82:0,3,14	0/0:41,0:10:4.36:0,4,95	1/1:26,0:25:10.78:137,11,0	0/1:21,0:21:2.12:115,0,2	1/1:13,0:11:5.13:54,5,0	1/1:25,0:23:4.66:125,5,0	0/1:12,0:11:3.13:68,0,3	1/1:19,1:17:19.01:261,19,0	1/1:15,0:14:14.03:179,14,0	0/1:14,0:11:3.65:81,0,4	0/1:7,0:7:24.79:32,0,25	1/1:7,0:6:5.85:50,6,0	1/1:19,0:18:31.93:276,32,0	0/1:11,0:11:23.57:56,0,24	0/1:34,0:32:99:151,0,129	0/1:23,0:21:38.27:38,0,151	0/1:30,0:26:0.47:352,0,0	1/1:19,0:13:9.35:96,9,0	1/1:9,0:5:5.95:46,6,0	1/1:8,0:8:7.48:51,7,0	1/1:9,2:11:16.13:172,16,0	1/1:7,0:6:4.40:52,4,0	1/1:14,0:13:11.44:196,11,0	1/1:24,0:23:8.54:157,9,0	1/1:29,1:27:6.31:76,6,0	0/1:10,0:3:19.84:32,0,20
chr10	28796736	.	TTTC	T	2564.20	PASS	AB=0.995;AC=44;AF=0.846;AN=52;BaseQRankSum=1.516;DP=469;FS=14.419;HRun=0;HaplotypeScore=72.3867;InbreedingCoeff=0.1456;MQ=34.19;MQ0=66;MQRankSum=0.918;QD=6.02;ReadPosRankSum=0.433;VQSLOD=0.7961;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:33,1:29:3.14:266,0,3	./.	./.	0/0:27,0:6:11.73:0,12,123	1/1:25,0:23:11.59:97,12,0	1/1:18,0:17:0.02:61,0,0	1/1:14,0:8:13.36:81,13,0	1/1:15,0:13:16.80:80,17,0	1/1:10,0:9:0.11:9,0,0	1/1:24,0:19:24.74:144,25,0	1/1:15,1:15:7.95:126,8,0	1/1:20,1:17:1.61:100,2,0	0/1:9,0:8:17.82:24,0,18	1/1:6,0:5:5.03:51,5,0	1/1:20,0:17:28.09:187,28,0	1/1:12,0:11:19.20:108,19,0	1/1:22,0:18:14.25:203,14,0	1/1:15,0:12:6.21:107,6,0	1/1:37,0:32:32.10:317,32,0	1/1:19,0:12:18.38:88,18,0	0/1:8,0:5:3.26:3,0,11	0/1:6,0:6:24.90:25,0,25	1/1:9,1:9:14.06:76,14,0	0/1:6,0:5:11.13:13,0,11	1/1:12,0:10:21.22:107,21,0	1/1:23,0:22:41.90:347,42,0	1/1:27,1:23:10.94:73,11,0	0/1:16,0:7:3.28:3,0,8
chr10	28796737	.	TTC	T	2996.78	PASS	AB=0.948;AC=44;AF=0.846;AN=52;BaseQRankSum=1.271;DP=466;FS=14.363;HRun=0;HaplotypeScore=65.0007;InbreedingCoeff=0.1548;MQ=34.16;MQ0=67;MQRankSum=2.078;QD=7.07;ReadPosRankSum=0.809;VQSLOD=1.8084;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:33,2:30:11.61:340,12,0	./.	./.	0/0:27,0:6:11.71:0,12,104	1/1:23,2:23:11.92:105,12,0	0/1:16,1:16:5.13:70,0,5	1/1:14,0:8:13.44:106,13,0	1/1:13,0:11:14.93:85,15,0	1/1:10,0:9:4.50:38,5,0	1/1:23,1:19:26.88:172,27,0	1/1:15,1:15:10.17:132,10,0	1/1:21,0:17:6.16:129,6,0	0/1:9,0:8:16.98:41,0,17	1/1:6,0:5:4.75:52,5,0	1/1:18,2:17:29.51:210,30,0	1/1:11,1:11:21.13:127,21,0	1/1:23,0:18:13.91:165,14,0	1/1:15,0:12:9.06:117,9,0	1/1:34,2:31:33.06:363,33,0	1/1:18,0:11:20.51:111,21,0	0/1:7,1:5:4.19:4,0,10	0/1:5,1:6:17.59:38,0,18	1/1:10,0:9:14.25:84,14,0	0/1:6,0:5:4.21:7,0,4	1/1:11,1:10:21.77:139,22,0	1/1:23,1:23:38.73:387,39,0	1/1:12,16:23:11.08:86,11,0	0/1:16,0:7:7.01:20,0,7
chr10	28796739	.	C	CT	1783.80	PASS	AB=0.846;AC=35;AF=0.673;AN=52;BaseQRankSum=-2.708;DP=460;FS=2.096;HRun=17;HaplotypeScore=65.5287;InbreedingCoeff=0.1835;MQ=34.86;MQ0=65;MQRankSum=-2.687;QD=4.36;ReadPosRankSum=-1.829;VQSLOD=0.6007;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:34,1:30:17.86:146,0,18	./.	./.	0/1:23,0:5:0:0,0,0	0/1:12,11:21:9.88:10,0,19	0/0:10,7:16:2.73:0,3,22	1/1:13,2:9:5.40:68,5,0	1/1:19,2:19:20.13:188,20,0	1/1:9,0:9:3:28,3,0	1/1:12,9:17:12.01:112,12,0	1/1:12,4:15:6.45:48,6,0	0/1:13,8:17:6.52:69,0,7	0/0:5,4:8:2.77:0,3,22	1/1:6,0:5:6.01:58,6,0	0/1:16,2:15:5.79:78,0,6	1/1:12,0:11:14.99:136,15,0	0/1:19,5:19:12.08:152,0,12	1/1:11,5:13:26.90:228,27,0	0/1:28,7:30:5.97:220,0,6	1/1:18,1:12:14.91:120,15,0	0/1:7,1:5:0:0,0,0	0/0:5,0:5:2.54:0,3,21	1/1:8,2:9:2.04:6,2,0	0/0:4,0:4:4.80:0,5,27	1/1:10,1:9:2.98:22,3,0	1/1:20,1:20:19.73:173,20,0	1/1:27,2:24:8.74:59,9,0	0/1:11,4:7:0:0,0,0
chr10	28796828	.	CT	C	723.86	PASS	AB=0.898;AC=6;AF=0.107;AN=56;BaseQRankSum=6.868;DP=457;FS=4.710;HRun=11;HaplotypeScore=50.0149;InbreedingCoeff=0.5912;MQ=64.44;MQ0=11;MQRankSum=0.123;QD=8.32;ReadPosRankSum=2.347;VQSLOD=1.8267;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,1:36:69:0,69,908	0/0:6,0:5:15.04:0,15,160	0/0:26,0:18:22.84:0,23,222	0/0:11,0:5:6.01:0,6,59	0/0:19,0:19:42.09:0,42,435	0/0:17,0:17:42.10:0,42,442	0/0:11,0:11:21.05:0,21,224	0/0:17,1:18:20.41:0,20,397	0/0:10,0:10:27.07:0,27,288	0/0:19,0:19:42.10:0,42,442	0/0:12,0:13:32.94:0,33,328	0/0:12,0:11:24.02:0,24,243	0/0:13,1:14:14.43:0,14,345	0/0:14,1:18:20.30:0,20,406	0/0:15,0:15:45.11:0,45,474	0/0:18,1:19:20.47:0,20,423	1/1:6,25:33:9.01:465,9,0	1/1:2,17:19:44.94:369,45,0	0/1:22,3:24:8.03:8,0,492	0/0:13,0:14:35.92:0,36,366	0/1:7,1:9:3.92:4,0,151	0/0:6,0:6:18.03:0,18,179	0/0:13,1:14:14.46:0,14,352	0/0:20,0:20:60.11:0,60,625	0/0:8,0:8:21.04:0,21,217	0/0:18,1:20:23.30:0,23,431	0/0:15,0:17:38.79:0,39,373	0/0:5,0:5:9.01:0,9,89
chr10	28797183	.	C	CT	484.40	PASS	AB=0.783;AC=4;AF=0.071;AN=56;BaseQRankSum=-0.022;DP=500;FS=20.710;HRun=12;HaplotypeScore=66.3403;InbreedingCoeff=0.3330;MQ=67.88;MQ0=14;MQRankSum=-2.583;QD=5.77;ReadPosRankSum=-0.087;VQSLOD=0.4232;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,1:31:39.44:0,39,450	0/0:6,0:6:13.90:0,14,88	0/0:54,0:15:6.06:0,6,121	0/1:43,0:21:3.44:3,0,67	0/0:16,0:16:35.35:0,35,260	0/0:20,0:21:40.64:0,41,281	0/0:10,0:10:20.81:0,21,147	0/0:26,0:25:49.68:0,50,351	0/0:15,0:15:26.81:0,27,197	0/0:13,0:13:32.51:0,33,225	0/0:10,0:10:17.81:0,18,131	0/0:14,1:15:2.69:0,3,173	0/0:19,0:19:38.61:0,39,277	0/0:13,1:16:1.66:0,2,155	0/0:13,0:14:31.83:0,32,225	0/0:19,0:20:40.78:0,41,290	0/1:6,20:26:8.44:408,0,8	1/1:1,12:14:20.81:178,21,0	0/0:25,0:26:54.25:0,54,368	0/0:6,0:7:10.96:0,11,72	0/0:7,0:9:10.98:0,11,71	0/0:5,0:5:8.95:0,9,66	0/0:4,0:4:2.98:0,3,22	0/0:11,0:11:23.82:0,24,175	0/0:12,0:11:26.77:0,27,191	0/0:19,0:19:12.33:0,12,217	0/0:22,0:22:34.47:0,34,234	0/0:12,0:12:8.76:0,9,63
chr10	28797923	.	T	TTTC	565.33	PASS	AB=1.000;AC=19;AF=0.950;AN=20;BaseQRankSum=-2.161;DP=32;FS=0.000;HRun=0;HaplotypeScore=16.7553;InbreedingCoeff=-0.2213;MQ=194.07;MQ0=0;MQRankSum=-1.256;QD=20.19;ReadPosRankSum=-1.960;VQSLOD=2.1122;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	1/1:7,2:12:11.68:233,12,0	0/1:7,0:7:10.07:50,0,10	./.	./.	1/1:1,0:1:3.01:40,3,0	./.	1/1:1,0:1:3:25,3,0	./.	./.	./.	./.	./.	./.	./.	1/1:1,0:1:3.01:46,3,0	./.	1/1:1,0:1:3.01:54,3,0	./.	1/1:1,0:1:3.01:50,3,0	./.	1/1:1,0:1:3.01:40,3,0	./.	./.	1/1:1,0:1:3.01:52,3,0	1/1:1,0:1:3.01:51,3,0	./.
chr10	28798193	.	TATA	T	45.02	PASS	AB=0.842;AC=7;AF=0.125;AN=56;BaseQRankSum=3.198;DP=287;FS=11.825;HRun=0;HaplotypeScore=54.2975;InbreedingCoeff=-0.1702;MQ=54.35;MQ0=2;MQRankSum=-2.818;QD=0.63;ReadPosRankSum=1.392;VQSLOD=0.3448;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:36.07:0,36,763	0/0:1,0:1:3.01:0,3,74	0/0:28,0:18:69.06:0,69,1489	0/0:22,0:9:37.93:0,38,794	0/0:6,0:6:9.03:0,9,177	0/0:7,1:8:14.09:0,14,355	0/0:17,1:18:36.24:0,36,618	0/1:14,1:15:8.41:8,0,871	0/0:8,0:8:24.08:0,24,571	0/0:9,0:9:27.09:0,27,636	0/0:5,0:5:6.49:0,6,143	0/1:12,2:14:16.43:16,0,623	0/1:8,1:9:16.75:17,0,285	0/1:7,2:9:5.72:6,0,318	0/1:11,2:13:51.93:52,0,345	0/0:7,1:8:9.33:0,9,491	0/0:4,0:4:9.03:0,9,221	0/0:11,0:11:27.09:0,27,586	0/0:4,0:4:12.04:0,12,256	0/0:7,0:7:5.69:0,6,144	0/0:9,0:9:21.07:0,21,482	0/0:9,0:9:13.68:0,14,341	0/0:8,0:8:8.47:0,8,183	0/0:7,0:7:5.98:0,6,147	0/1:8,1:9:19.75:20,0,518	0/0:12,0:12:34.35:0,34,719	0/0:15,0:15:36.07:0,36,742	0/1:1,2:3:48.37:48,0,68
chr10	28798380	.	AGTGT	A	4586.65	PASS	AB=0.748;AC=45;AF=0.938;AN=48;BaseQRankSum=-1.906;DP=478;FS=0.000;HRun=0;HaplotypeScore=88.5819;InbreedingCoeff=-0.0899;MQ=60.47;MQ0=13;MQRankSum=0.013;QD=10.87;ReadPosRankSum=-0.551;VQSLOD=3.8085;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:20,10:29:18.06:281,18,0	./.	./.	./.	1/1:5,2:7:3.01:47,3,0	1/1:12,6:21:24.06:319,24,0	1/1:12,10:25:24.06:318,24,0	./.	1/1:8,6:14:15.05:235,15,0	1/1:5,0:6:2.04:6,2,0	1/1:9,2:11:3.01:47,3,0	1/1:10,13:24:39.12:581,39,0	1/1:11,5:17:14.83:182,15,0	1/1:11,3:15:11.78:169,12,0	1/1:12,11:25:27.08:384,27,0	1/1:4,10:18:36.10:489,36,0	0/1:24,1:38:43.02:43,0,76	0/1:11,1:19:24.17:24,0,122	1/1:15,0:15:2.28:27,2,0	1/1:9,0:10:5.05:40,5,0	0/1:28,8:33:5.89:216,0,6	1/1:6,0:11:4.17:139,4,0	1/1:4,0:5:6.48:76,6,0	1/1:12,14:26:36.12:563,36,0	1/1:6,0:6:6:71,6,0	1/1:16,5:20:8.97:99,9,0	1/1:5,6:10:9.03:141,9,0	1/1:4,4:8:6.02:91,6,0
chr10	28799336	.	G	GT	788.92	PASS	AB=0.975;AC=6;AF=0.107;AN=56;BaseQRankSum=-1.873;DP=560;FS=6.802;HRun=14;HaplotypeScore=76.7275;InbreedingCoeff=0.5347;MQ=70.70;MQ0=10;MQRankSum=-1.037;QD=7.17;ReadPosRankSum=-1.122;VQSLOD=2.3336;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,1:26:21.02:0,21,239	0/0:16,0:16:35.38:0,35,228	0/1:21,0:13:1.09:1,0,32	0/0:13,0:11:1.21:0,1,31	0/0:26,0:26:44.14:0,44,286	0/0:20,0:20:11.43:0,11,186	0/0:6,0:6:17.74:0,18,115	0/0:27,0:25:36.88:0,37,231	0/0:16,0:16:23.55:0,24,153	0/0:22,0:24:34.12:0,34,208	0/0:18,0:18:25.45:0,25,159	0/0:19,0:20:46.33:0,46,294	0/0:14,2:16:3.20:0,3,147	0/1:16,1:19:2.56:3,0,101	0/0:20,0:20:35.36:0,35,230	0/0:20,1:21:10.35:0,10,190	1/1:15,23:38:30.75:479,31,0	1/1:5,24:29:21.45:427,21,0	0/0:20,0:17:23.12:0,23,144	0/0:25,0:27:48.67:0,49,311	0/0:9,0:10:19.75:0,20,120	0/0:7,0:7:5.86:0,6,38	0/0:14,0:14:26.50:0,27,171	0/0:12,0:12:17.70:0,18,115	0/0:15,0:16:42.66:0,43,262	0/0:14,0:15:34.40:0,34,217	0/0:33,0:33:80.99:0,81,510	0/0:20,3:23:2.33:0,2,255
chr10	28801009	.	CT	C	1484.92	PASS	AB=0.707;AC=38;AF=0.679;AN=56;BaseQRankSum=2.360;DP=387;FS=1.392;HRun=16;HaplotypeScore=47.9098;InbreedingCoeff=-0.0441;MQ=56.31;MQ0=4;MQRankSum=1.445;QD=4.43;ReadPosRankSum=2.377;VQSLOD=0.6297;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,8:16:8.61:54,9,0	1/1:2,2:6:9.88:48,10,0	0/0:12,0:9:2.22:0,2,7	0/0:8,0:4:4.76:0,5,24	1/1:7,4:10:5:35,5,0	0/1:7,3:11:8.52:61,0,9	0/1:5,7:12:2.77:90,0,3	0/1:13,4:19:14.63:30,0,15	0/1:3,3:7:14.17:31,0,14	0/1:11,2:14:6.83:18,0,7	0/1:7,4:12:21.94:58,0,22	0/1:4,6:13:3.42:80,0,3	1/1:5,7:12:12.98:87,13,0	1/1:13,5:18:8.48:53,8,0	1/1:5,7:12:17.52:108,18,0	1/1:3,7:12:1.99:97,2,0	0/0:30,1:32:47.04:0,47,412	0/1:16,3:21:10.96:11,0,171	1/1:11,10:21:7.42:127,7,0	1/1:3,7:10:14.46:89,14,0	0/1:9,7:19:5.64:96,0,6	0/1:4,2:6:16.34:27,0,16	0/1:6,3:10:11.33:46,0,11	1/1:2,8:11:26.39:161,26,0	1/1:6,4:11:4.84:24,5,0	1/1:11,8:19:11.13:71,11,0	0/1:9,4:16:4.49:68,0,4	1/1:2,5:10:14.92:71,15,0
chr10	28803509	.	TA	T	7719.69	PASS	AB=1.000;AC=53;AF=0.946;AN=56;BaseQRankSum=0.093;DP=432;FS=0.000;HRun=11;HaplotypeScore=43.7123;InbreedingCoeff=0.4845;MQ=63.73;MQ0=2;MQRankSum=-0.624;QD=18.34;ReadPosRankSum=1.289;VQSLOD=5.5267;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,26:28:71.91:591,72,0	1/1:2,7:9:20.97:172,21,0	0/1:10,0:4:0.74:1,0,19	0/0:11,0:6:3:0,3,29	1/1:0,19:19:56.85:456,57,0	1/1:1,17:18:44.95:369,45,0	1/1:1,6:7:14.98:123,15,0	1/1:7,24:31:62.79:500,63,0	1/1:5,9:14:26.34:205,26,0	1/1:3,20:23:53.88:437,54,0	1/1:6,13:19:9.99:263,10,0	1/1:0,11:11:29.97:246,30,0	1/1:2,11:13:4.22:196,4,0	1/1:0,6:6:17.98:148,18,0	1/1:0,16:16:47.95:394,48,0	1/1:0,16:16:32.96:271,33,0	1/1:4,27:32:73.95:597,74,0	1/1:8,18:26:27.58:349,28,0	1/1:4,13:17:32.89:271,33,0	1/1:2,14:16:41.95:345,42,0	1/1:0,3:3:5.99:49,6,0	1/1:0,2:2:5.99:49,6,0	1/1:0,11:11:29.97:246,30,0	1/1:1,5:6:11.98:98,12,0	1/1:2,13:16:37.99:301,38,0	1/1:3,20:23:59.87:484,60,0	1/1:2,13:14:4.19:239,4,0	1/1:0,14:14:38.96:320,39,0
chr10	28807423	.	TTGTG	T	3443.51	PASS	AB=0.962;AC=42;AF=0.840;AN=50;BaseQRankSum=-0.507;DP=518;FS=0.000;HRun=0;HaplotypeScore=136.3565;InbreedingCoeff=0.1003;MQ=63.79;MQ0=20;MQRankSum=0.361;QD=8.72;ReadPosRankSum=-0.434;VQSLOD=2.7410;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:25:9.01:101,9,0	0/1:3,0:3:22.61:40,0,23	./.	./.	0/1:17,0:17:4.51:168,0,5	1/1:26,0:26:8.97:103,9,0	1/1:15,0:14:11.97:131,12,0	0/0:25,0:25:0:0,0,0	1/1:7,0:7:6.48:74,6,0	1/1:17,0:16:6.01:74,6,0	0/1:13,0:13:2.73:40,0,3	0/0:19,0:19:2.39:0,2,45	1/1:17,0:17:18.03:242,18,0	1/1:17,0:17:18.05:248,18,0	1/1:15,0:15:18.05:241,18,0	1/1:26,0:26:27.07:352,27,0	1/1:10,3:13:15.05:217,15,0	0/1:9,2:11:24.86:82,0,25	1/1:16,0:16:2.98:28,3,0	1/1:18,0:16:18.05:226,18,0	1/1:16,0:15:3.01:46,3,0	1/1:15,0:14:5.91:92,6,0	1/1:20,0:20:9.01:103,9,0	1/1:18,0:18:12.03:166,12,0	1/1:20,0:20:25.62:329,26,0	1/1:23,0:23:8.98:87,9,0	1/1:26,0:25:16.55:255,17,0	./.
chr10	28807426	.	TGTG	T	749.47	PASS	AB=0.827;AC=17;AF=0.304;AN=56;BaseQRankSum=12.823;DP=506;FS=3.517;HRun=0;HaplotypeScore=131.3426;InbreedingCoeff=-0.4606;MQ=59.62;MQ0=22;MQRankSum=-9.209;QD=2.58;ReadPosRankSum=0.328;VQSLOD=1.9022;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:26:51.66:52,0,143	0/1:2,1:3:15.40:15,0,44	0/0:34,0:16:48.15:0,48,597	0/0:36,0:9:23.43:0,23,250	0/1:10,5:14:63.22:63,0,93	0/1:21,1:23:25.51:26,0,148	0/1:12,2:13:30.83:31,0,60	0/0:23,0:23:65.16:0,65,324	0/1:5,1:7:23.33:23,0,23	0/0:15,1:16:2.70:0,3,133	0/0:11,1:12:12.09:0,12,140	0/0:13,0:20:28.45:0,28,261	0/1:14,2:17:78.57:79,0,111	0/1:11,5:16:77.02:77,0,83	0/1:11,3:15:50.46:92,0,50	0/1:17,6:26:99:111,0,145	0/1:16,0:14:1.24:1,0,150	0/0:11,0:11:4.57:0,5,162	0/0:16,0:16:31:0,31,212	0/1:14,2:16:68.47:68,0,87	0/1:14,1:14:8.93:9,0,75	0/1:14,2:15:18.48:18,0,126	0/0:18,1:19:1.67:0,2,127	0/1:13,5:19:38.58:59,0,39	0/1:9,6:17:68.65:122,0,69	0/0:22,1:23:11.32:0,11,190	0/1:20,4:25:54.74:55,0,177	0/0:4,0:4:8.65:0,9,46
chr10	28807473	.	GCA	G	571.16	PASS	AB=0.960;AC=18;AF=0.321;AN=56;BaseQRankSum=12.893;DP=468;FS=36.802;HRun=0;HaplotypeScore=125.0670;InbreedingCoeff=-0.3636;MQ=59.53;MQ0=10;MQRankSum=-11.795;QD=2.12;ReadPosRankSum=0.653;VQSLOD=0.2936;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:21,1:22:51.26:51,0,270	1/1:1,0:1:1.55:4,2,0	0/0:34,0:23:62.89:0,63,971	0/0:40,0:20:51.81:0,52,884	0/1:23,0:22:26.04:26,0,222	0/1:18,1:19:2.99:3,0,251	0/1:11,0:10:24.47:24,0,135	0/0:23,0:23:48.51:0,49,464	0/1:11,0:11:15.50:15,0,171	0/1:13,0:13:0.09:0,0,216	0/0:12,0:11:6.56:0,7,203	0/1:13,0:14:66.79:67,0,82	0/1:7,1:8:11.96:12,0,88	0/1:12,1:13:88.78:89,0,89	0/1:15,2:17:41.10:41,0,191	0/1:20,0:20:91.51:92,0,201	0/0:17,0:15:42.06:0,42,537	0/0:13,0:13:29.46:0,29,474	0/0:15,1:16:14.06:0,14,297	0/1:22,2:23:47.27:47,0,317	0/0:14,0:13:20.54:0,21,181	0/0:15,0:15:1.33:0,1,154	0/1:14,1:15:35.70:36,0,236	0/1:15,0:15:57.52:58,0,123	0/1:25,0:25:75.83:76,0,336	0/0:12,0:12:33.48:0,33,299	0/1:17,1:17:78.97:79,0,186	0/0:2,0:2:6:0,6,51
chr10	28807475	.	A	AG	11956.94	PASS	AC=46;AF=0.852;AN=54;BaseQRankSum=-4.050;DP=481;FS=18.599;HRun=4;HaplotypeScore=81.1635;InbreedingCoeff=0.9572;MQ=61.53;MQ0=8;MQRankSum=-2.771;QD=32.06;ReadPosRankSum=3.557;VQSLOD=3.2197;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,17:21:57.08:713,57,0	./.	0/0:36,0:25:65.92:0,66,742	0/0:41,0:21:57.99:0,58,618	1/1:3,20:22:45.15:612,45,0	1/1:4,17:21:39.13:522,39,0	1/1:0,10:10:26.94:364,27,0	1/1:4,20:24:63.20:840,63,0	1/1:0,12:12:33.11:443,33,0	1/1:2,11:13:33.11:449,33,0	1/1:1,11:11:30.10:408,30,0	1/1:3,11:14:39.11:497,39,0	1/1:3,7:10:10.78:197,11,0	1/1:4,11:15:33.03:399,33,0	1/1:3,14:17:45.14:593,45,0	1/1:0,21:21:57.19:769,57,0	0/0:17,0:16:36.06:0,36,394	0/0:13,0:13:36.09:0,36,400	1/1:3,14:17:45.05:559,45,0	1/1:4,21:24:66.21:883,66,0	1/1:5,10:14:17.82:246,18,0	1/1:3,12:14:33.11:439,33,0	1/1:3,12:15:42.01:531,42,0	1/1:2,13:15:29.98:366,30,0	1/1:4,21:25:65.66:837,66,0	1/1:1,12:13:36.12:492,36,0	1/1:1,17:17:54.17:716,54,0	1/1:0,2:2:6.02:82,6,0
chr10	28810777	.	TTTG	T	4046.31	PASS	AB=0.988;AC=36;AF=0.643;AN=56;BaseQRankSum=-4.670;DP=575;FS=22.628;HRun=0;HaplotypeScore=109.3794;InbreedingCoeff=-0.0391;MQ=49.75;MQ0=22;MQRankSum=0.973;QD=8.45;ReadPosRankSum=-5.421;VQSLOD=-0.6882;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:24:23.07:187,0,23	0/1:8,0:7:11.54:87,0,12	0/0:21,0:8:22.23:0,22,190	0/0:19,0:2:2:0,2,7	1/1:30,1:31:20.01:255,20,0	1/1:26,2:28:21.53:374,22,0	1/1:20,0:20:13.32:186,13,0	0/1:36,0:34:67.97:174,0,68	1/1:14,0:14:5.49:176,5,0	0/1:26,1:26:7.69:322,0,8	1/1:24,0:22:13.09:201,13,0	1/1:19,0:18:2.68:11,3,0	0/1:16,0:15:82.55:83,0,99	1/1:11,0:11:8.88:171,9,0	0/1:20,0:19:99:114,0,141	0/1:19,0:18:48.92:49,0,116	0/0:33,0:32:21.37:0,21,216	0/0:23,0:21:9.31:0,9,152	1/1:21,0:16:18.91:184,19,0	0/1:27,0:27:6.23:156,0,6	1/1:8,0:8:11.62:103,12,0	1/1:13,0:13:2.18:79,2,0	0/1:19,0:18:28.28:115,0,28	0/1:10,0:9:20.98:22,0,21	0/1:23,3:25:26.88:396,0,27	0/1:17,0:17:10.08:155,0,10	1/1:26,1:26:3.48:289,3,0	1/1:10,0:10:20.95:158,21,0
chr10	28810778	.	TTG	T	6477.51	PASS	AB=0.971;AC=46;AF=0.821;AN=56;BaseQRankSum=-6.579;DP=572;FS=19.283;HRun=0;HaplotypeScore=93.0712;InbreedingCoeff=0.1764;MQ=49.77;MQ0=22;MQRankSum=2.116;QD=12.15;ReadPosRankSum=-4.235;VQSLOD=2.4528;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:27,1:24:22.66:325,23,0	1/1:7,1:7:9.66:92,10,0	0/0:21,0:8:22.09:0,22,189	0/0:18,0:2:2.62:0,3,14	1/1:29,2:31:42.99:374,43,0	1/1:29,0:29:67.24:597,67,0	1/1:17,3:20:40.65:341,41,0	0/1:35,1:34:14.90:295,0,15	1/1:12,2:14:25.86:308,26,0	1/1:25,2:26:36.58:479,37,0	1/1:24,0:22:36.25:293,36,0	1/1:19,0:18:2.68:12,3,0	0/1:16,0:15:21.35:132,0,21	1/1:11,0:11:21.74:188,22,0	0/1:20,0:19:36.55:156,0,37	0/1:19,0:18:13.17:91,0,13	0/1:31,0:30:12.80:13,0,124	0/1:19,4:21:36.08:36,0,100	1/1:20,1:16:34.91:258,35,0	1/1:24,3:27:57.85:480,58,0	1/1:7,1:8:19.56:123,20,0	1/1:12,1:13:13.12:113,13,0	1/1:19,0:18:15.31:237,15,0	1/1:10,0:9:5.36:65,5,0	1/1:20,6:25:36.77:565,37,0	1/1:16,1:17:23.07:256,23,0	1/1:26,0:25:47.23:485,47,0	1/1:10,0:10:22.94:165,23,0
chr10	28810779	.	TG	T	8312.49	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-3.684;DP=565;FS=0.000;HRun=1;HaplotypeScore=79.3462;InbreedingCoeff=0.8240;MQ=51.95;MQ0=22;MQRankSum=2.307;QD=17.61;ReadPosRankSum=-0.612;VQSLOD=4.7321;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:23,4:23:53.31:500,53,0	1/1:8,0:7:15.85:111,16,0	0/0:21,1:9:21.55:0,22,154	0/0:18,1:3:2.60:0,3,16	1/1:5,25:30:54.76:401,55,0	1/1:25,5:30:82.88:793,83,0	1/1:19,1:20:46.76:429,47,0	1/1:33,2:33:31.54:388,32,0	1/1:13,1:14:37.16:330,37,0	1/1:24,3:26:42.71:566,43,0	1/1:2,22:22:44.47:333,44,0	1/1:0,18:17:3:26,3,0	1/1:15,1:15:30.90:205,31,0	1/1:10,0:10:29.04:218,29,0	1/1:18,2:19:39.78:297,40,0	1/1:18,1:18:38.80:217,39,0	0/0:30,0:29:40.77:0,41,235	0/0:21,1:20:1.96:0,2,109	1/1:19,2:16:37.01:296,37,0	1/1:24,2:26:75.94:662,76,0	1/1:8,0:8:20.53:172,21,0	1/1:1,10:11:14.94:128,15,0	1/1:17,2:18:41.84:330,42,0	1/1:10,0:9:19.79:147,20,0	1/1:25,1:25:67.73:604,68,0	1/1:3,14:17:41.65:341,42,0	1/1:25,1:25:67.03:627,67,0	1/1:10,0:10:23.66:192,24,0
chr10	28810780	.	GTT	G	496.84	PASS	AB=0.980;AC=14;AF=0.250;AN=56;BaseQRankSum=0.581;DP=562;FS=1.070;HRun=17;HaplotypeScore=112.7311;InbreedingCoeff=-0.2080;MQ=52.92;MQ0=23;MQRankSum=-0.675;QD=1.72;ReadPosRankSum=2.813;VQSLOD=-0.4693;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:23:22.82:0,23,217	0/0:8,0:7:2.05:0,2,72	0/0:23,0:9:20.85:0,21,186	0/0:20,0:4:0.14:0,0,8	0/1:31,0:31:22.31:22,0,68	0/1:30,0:30:21.58:22,0,152	0/1:19,0:19:17.09:17,0,99	0/0:34,0:32:17.29:0,17,266	0/1:14,0:14:55.36:55,0,57	0/0:26,0:25:3.35:0,3,177	0/1:24,0:22:29.62:30,0,53	0/0:19,0:18:5.04:0,5,33	0/1:16,0:15:3.76:4,0,256	0/0:9,0:9:8.97:0,9,83	0/0:20,0:19:22.48:0,22,401	0/0:19,0:18:21.13:0,21,376	1/1:10,14:25:17.05:222,17,0	0/1:15,5:20:22.04:122,0,22	0/0:21,0:16:3.08:0,3,51	0/1:27,0:27:18.02:18,0,206	0/0:8,0:8:14.18:0,14,83	0/1:11,0:11:17.10:22,0,17	0/0:18,0:17:8:0,8,170	0/0:10,0:9:7.70:0,8,119	0/1:26,0:25:81.87:82,0,183	0/1:17,0:17:10:10,0,116	0/1:26,0:25:21.24:21,0,140	0/0:11,0:11:14.09:0,14,82
chr10	28812069	.	CTAT	C	20842.44	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-2.261;DP=590;FS=0.000;HRun=0;HaplotypeScore=100.9012;InbreedingCoeff=0.9812;MQ=77.80;MQ0=0;MQRankSum=-9.313;QD=37.55;ReadPosRankSum=6.098;VQSLOD=5.6302;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,14:15:30.10:482,30,0	1/1:0,11:11:20.79:309,21,0	0/0:22,0:22:63.22:0,63,1327	0/0:13,0:13:30.10:0,30,597	1/1:2,22:24:42.14:675,42,0	1/1:2,25:27:66.18:1021,66,0	1/1:1,13:14:33.11:530,33,0	1/1:1,25:26:75.26:1190,75,0	1/1:0,16:16:48.12:743,48,0	1/1:1,26:27:78.27:1245,78,0	1/1:0,20:20:39.13:627,39,0	1/1:0,23:23:57.15:888,57,0	1/1:1,26:27:66.23:1061,66,0	1/1:1,23:24:66.14:1004,66,0	1/1:1,31:32:78.18:1197,78,0	1/1:2,16:18:42.14:675,42,0	1/1:3,20:23:42.14:675,42,0	1/1:2,14:16:42.14:675,42,0	1/1:1,13:14:39.11:581,39,0	1/1:2,26:28:66.18:1021,66,0	1/1:4,20:24:54.14:840,54,0	1/1:1,21:22:42.14:675,42,0	1/1:0,23:23:48.16:771,48,0	1/1:1,14:15:30.09:482,30,0	1/1:3,23:26:60.12:908,60,0	1/1:0,31:31:93.30:1460,93,0	1/1:0,23:23:57.07:915,57,0	1/1:2,4:6:12.04:193,12,0
chr10	28814720	.	AAAAC	A	26232.03	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=2.680;DP=663;FS=0.000;HRun=0;HaplotypeScore=126.3830;InbreedingCoeff=0.9990;MQ=89.64;MQ0=0;MQRankSum=-8.603;QD=45.70;ReadPosRankSum=5.772;VQSLOD=5.1731;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,26:28:57.20:1049,57,0	1/1:1,9:10:24.08:442,24,0	0/0:23,0:23:60.20:0,60,1468	0/0:33,0:33:93.30:0,93,2295	1/1:1,24:25:66.23:1212,66,0	1/1:0,31:31:78.27:1435,78,0	1/1:2,12:14:33.11:607,33,0	1/1:4,30:34:90.27:1552,90,0	1/1:0,18:18:45.15:828,45,0	1/1:4,24:28:69.24:1260,69,0	1/1:1,23:24:63.22:1159,63,0	1/1:2,29:31:87.30:1600,87,0	1/1:1,21:22:57.20:1049,57,0	1/1:2,29:31:75.24:1380,75,0	1/1:2,24:26:60.21:1104,60,0	1/1:1,23:24:60.20:1084,60,0	0/0:16,0:16:42.14:0,42,1109	0/0:17,0:17:51.18:0,51,1299	1/1:3,22:25:66.20:1144,66,0	1/1:2,27:29:75.26:1368,75,0	1/1:1,22:23:54.18:994,54,0	1/1:2,19:21:51.17:938,51,0	1/1:2,17:19:41.59:772,42,0	1/1:3,15:18:39.13:718,39,0	1/1:2,26:28:69.24:1269,69,0	1/1:1,24:25:72.23:1285,72,0	1/1:1,30:31:81.28:1489,81,0	1/1:0,9:9:27.09:495,27,0
chr10	28816929	.	G	GT	14496.44	PASS	AB=0.692;AC=48;AF=0.889;AN=54;BaseQRankSum=-9.955;DP=752;FS=0.541;HRun=10;HaplotypeScore=87.2322;InbreedingCoeff=0.2469;MQ=79.63;MQ0=3;MQRankSum=-3.461;QD=21.01;ReadPosRankSum=5.316;VQSLOD=5.1229;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,29:36:81.04:846,81,0	0/1:5,7:12:22.95:168,0,23	0/0:59,0:42:27.98:0,28,273	0/1:40,0:27:30.61:31,0,108	1/1:2,24:26:69.08:710,69,0	1/1:1,23:23:66.13:691,66,0	1/1:4,18:22:26.49:487,26,0	1/1:9,25:34:55.34:765,55,0	1/1:3,13:16:33.08:352,33,0	1/1:1,20:21:51.13:543,51,0	1/1:6,23:31:25.50:637,26,0	1/1:2,34:36:81.04:845,81,0	0/1:7,21:28:4.14:513,0,4	1/1:5,19:25:53.97:558,54,0	1/1:6,29:35:41.51:618,42,0	1/1:6,23:30:56.98:590,57,0	1/1:9,22:31:3.38:516,3,0	0/1:3,10:13:16.24:243,0,16	1/1:4,12:16:36.01:339,36,0	1/1:3,34:39:65.69:986,66,0	1/1:1,12:14:24.74:339,25,0	1/1:3,19:22:58.66:600,59,0	1/1:3,29:32:50.41:740,50,0	1/1:5,18:23:26.50:487,26,0	1/1:4,14:18:17.46:391,17,0	1/1:3,31:34:66.04:895,66,0	1/1:7,25:32:56.98:608,57,0	./.
chr10	28817141	.	CAT	C	21825.86	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-0.645;DP=617;FS=9.638;HRun=0;HaplotypeScore=85.2327;InbreedingCoeff=0.9972;MQ=92.66;MQ0=3;MQRankSum=-7.977;QD=40.87;ReadPosRankSum=4.735;VQSLOD=6.6663;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,22:23:63.21:953,63,0	1/1:1,8:8:18.06:275,18,0	0/0:19,0:19:57.19:0,57,1002	0/0:32,0:32:81.26:0,81,1399	1/1:0,18:18:48.16:733,48,0	1/1:1,22:23:57.19:872,57,0	1/1:0,20:20:54.18:826,54,0	1/1:0,25:25:75.18:1038,75,0	1/1:0,27:27:78.26:1194,78,0	1/1:0,23:23:65.96:975,66,0	1/1:0,15:15:42.14:642,42,0	1/1:0,34:34:90.31:1378,90,0	1/1:0,31:31:75.25:1148,75,0	1/1:0,29:28:75.23:1148,75,0	1/1:0,29:28:84.29:1286,84,0	1/1:0,31:31:87.30:1332,87,0	0/0:17,0:17:51.15:0,51,934	0/0:15,0:15:39.11:0,39,717	1/1:0,16:16:45.15:687,45,0	1/1:0,16:16:48.16:734,48,0	1/1:2,27:29:75.25:1148,75,0	1/1:0,18:18:42.14:643,42,0	1/1:0,10:10:27.09:413,27,0	1/1:1,15:16:36.12:551,36,0	1/1:0,16:16:45.15:688,45,0	1/1:0,31:31:90.31:1375,90,0	1/1:1,34:35:87.23:1329,87,0	1/1:0,10:10:30.10:457,30,0
chr10	28817340	.	AT	A	10421.74	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-3.661;DP=553;FS=11.652;HRun=11;HaplotypeScore=58.1677;InbreedingCoeff=0.8356;MQ=72.20;MQ0=0;MQRankSum=-3.974;QD=19.66;ReadPosRankSum=3.407;VQSLOD=5.3081;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,13:15:32.92:271,33,0	1/1:0,6:6:17.98:148,18,0	0/0:13,0:13:10.87:0,11,214	0/0:9,0:10:2.37:0,2,31	1/1:3,26:29:77.89:640,78,0	1/1:1,15:16:41.95:345,42,0	1/1:2,12:14:32.95:271,33,0	1/1:11,27:38:74.83:616,75,0	1/1:6,11:18:13.84:253,14,0	1/1:3,18:21:53.86:439,54,0	1/1:3,22:27:69.99:554,70,0	1/1:4,18:23:49.97:400,50,0	1/1:1,19:20:53.94:443,54,0	1/1:2,21:23:59.93:493,60,0	1/1:3,16:21:46.02:357,46,0	1/1:3,17:20:44.94:369,45,0	1/1:3,18:21:53.93:443,54,0	1/1:3,19:22:50.92:419,51,0	1/1:4,14:18:41.94:345,42,0	1/1:4,31:36:85.90:696,86,0	1/1:2,4:6:11.98:99,12,0	1/1:1,18:19:50.94:419,51,0	1/1:2,19:21:56.93:468,57,0	1/1:2,9:11:26.97:222,27,0	1/1:2,16:18:44.93:370,45,0	1/1:3,27:30:81.76:663,82,0	1/1:4,22:26:34.27:486,34,0	1/1:3,8:11:23.94:197,24,0
chr10	28818239	.	A	ATGTGTG	17078.49	PASS	AB=0.788;AC=51;AF=0.911;AN=56;BaseQRankSum=-3.697;DP=629;FS=18.241;HRun=0;HaplotypeScore=162.6167;InbreedingCoeff=0.6478;MQ=50.01;MQ0=3;MQRankSum=-1.977;QD=28.37;ReadPosRankSum=2.118;VQSLOD=3.5629;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:24,18:47:42.14:1266,42,0	1/1:5,5:10:15.05:494,15,0	0/0:13,0:8:15.03:0,15,216	0/0:14,0:6:8.52:0,9,127	1/1:19,10:32:6.49:198,6,0	1/1:8,11:24:30.09:867,30,0	1/1:12,5:18:21.07:674,21,0	1/1:31,0:29:30.09:619,30,0	1/1:7,5:14:12.04:335,12,0	1/1:11,11:24:44.65:1203,45,0	1/1:8,10:22:18.06:532,18,0	1/1:13,9:26:29.35:803,29,0	1/1:11,11:26:51.17:1478,51,0	1/1:16,12:28:33.11:1085,33,0	1/1:11,4:16:9.03:296,9,0	1/1:11,8:21:27.09:829,27,0	1/1:6,0:23:36.12:464,36,0	1/1:6,0:19:36.59:467,37,0	0/1:18,4:26:5.71:603,0,6	1/1:8,6:15:12.03:395,12,0	1/1:17,1:24:6.02:77,6,0	1/1:7,7:16:18.06:472,18,0	1/1:14,5:21:15.05:373,15,0	1/1:15,6:24:20.98:630,21,0	1/1:19,10:32:27.09:888,27,0	1/1:18,7:24:36.99:1062,37,0	1/1:13,6:23:13.60:400,14,0	1/1:4,5:11:19.21:568,19,0
chr10	28823314	.	TA	T	1058.73	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.815;DP=665;FS=2.598;HRun=9;HaplotypeScore=63.1660;InbreedingCoeff=0.9851;MQ=74.95;MQ0=0;MQRankSum=-1.791;QD=21.61;ReadPosRankSum=1.155;VQSLOD=4.5453;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:96.26:0,96,1096	0/0:5,0:5:15.02:0,15,160	0/0:12,0:12:21.94:0,22,237	0/0:16,0:16:39.11:0,39,442	0/0:33,0:33:90.23:0,90,1026	0/0:33,0:33:96.29:0,96,1108	0/0:19,0:19:48.14:0,48,554	0/0:30,0:30:78.17:0,78,867	0/0:20,0:20:57.09:0,57,631	0/0:27,0:27:72.07:0,72,802	0/0:21,0:21:57.17:0,57,657	0/0:28,1:29:53.77:0,54,864	0/0:34,0:34:81.21:0,81,921	0/0:22,0:22:63.17:0,63,716	0/0:40,0:40:99:0,120,1375	0/0:25,0:25:63.18:0,63,720	1/1:3,30:33:84.04:769,84,0	1/1:1,15:16:45.02:412,45,0	0/0:21,0:21:57.16:0,57,647	0/0:32,0:32:75.46:0,75,1021	0/0:16,0:16:42.12:0,42,483	0/0:16,1:17:17.67:0,18,457	0/0:12,0:12:33.10:0,33,381	0/0:12,0:12:33.10:0,33,381	0/0:25,0:25:63.19:0,63,727	0/0:23,1:24:29.70:0,30,596	0/0:37,1:37:80.86:0,81,1184	0/0:17,0:17:51.15:0,51,589
chr10	28823510	.	CT	C	7609.03	PASS	AB=0.768;AC=52;AF=0.929;AN=56;BaseQRankSum=-2.337;DP=564;FS=12.896;HRun=13;HaplotypeScore=69.4312;InbreedingCoeff=0.4235;MQ=72.69;MQ0=0;MQRankSum=-2.658;QD=13.91;ReadPosRankSum=2.223;VQSLOD=4.4137;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,21:26:30.40:372,30,0	1/1:1,6:7:11.93:88,12,0	0/1:20,0:8:26.76:27,0,43	0/0:15,0:13:9.32:0,9,84	1/1:4,25:29:30.05:439,30,0	1/1:4,16:21:40.78:290,41,0	1/1:4,11:15:24.32:176,24,0	1/1:13,31:44:86.18:608,86,0	1/1:3,11:16:31.25:211,31,0	1/1:4,15:19:15.82:277,16,0	1/1:5,13:18:32.47:240,32,0	0/1:3,17:22:6.53:266,0,7	1/1:5,16:21:41.43:296,41,0	1/1:3,9:12:23.86:175,24,0	1/1:5,12:18:34.82:247,35,0	1/1:3,16:20:43.79:313,44,0	1/1:2,12:14:32.80:241,33,0	1/1:3,16:19:44.35:316,44,0	1/1:4,24:28:71.51:523,72,0	1/1:5,18:23:50.57:367,51,0	1/1:2,9:11:18.28:149,18,0	1/1:1,11:12:32.81:240,33,0	1/1:5,15:21:37.80:268,38,0	1/1:4,18:22:15.57:277,16,0	1/1:3,16:20:34.85:247,35,0	1/1:6,23:31:20.24:452,20,0	1/1:8,18:30:52.67:351,53,0	1/1:0,7:7:20.88:153,21,0
chr10	28824729	.	A	ATAG	12228.43	PASS	AB=0.941;AC=53;AF=0.946;AN=56;BaseQRankSum=5.144;DP=273;FS=2.433;HRun=0;HaplotypeScore=237.3529;InbreedingCoeff=-0.0846;MQ=101.04;MQ0=0;MQRankSum=-3.913;QD=44.79;ReadPosRankSum=4.989;VQSLOD=5.6655;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:5,0:5:12.04:200,12,0	1/1:8,0:8:24.08:412,24,0	0/1:17,3:20:28.78:623,0,29	0/1:20,1:21:15.55:530,0,16	1/1:17,0:17:50.64:799,51,0	1/1:9,0:9:27.09:459,27,0	1/1:4,0:4:4.62:143,5,0	1/1:2,0:2:6.02:103,6,0	1/1:9,0:9:27.09:449,27,0	1/1:9,0:9:27.09:493,27,0	1/1:9,0:9:12.59:346,13,0	1/1:7,0:7:21.07:351,21,0	1/1:13,0:13:39.13:657,39,0	1/1:12,0:12:36.12:587,36,0	1/1:13,0:13:39.13:654,39,0	1/1:11,0:11:33.11:551,33,0	1/1:1,0:1:3.01:50,3,0	1/1:4,0:4:12.04:217,12,0	1/1:6,0:6:18.06:316,18,0	1/1:12,0:12:35.86:600,36,0	0/1:3,0:3:8.22:42,0,8	1/1:14,0:15:44.89:769,45,0	1/1:14,0:14:32.99:573,33,0	1/1:5,0:5:0.40:90,0,0	1/1:17,0:17:42.55:832,43,0	1/1:10,0:10:30.10:540,30,0	1/1:13,0:13:39.13:624,39,0	1/1:4,0:4:12.04:218,12,0
chr10	28831254	.	TCTGGGACTTGAGTTCTGGGAA	T	24270.53	PASS	AB=0.806;AC=24;AF=0.429;AN=56;BaseQRankSum=20.047;DP=1026;FS=2.084;HRun=0;HaplotypeScore=572.6973;InbreedingCoeff=-0.7500;MQ=57.07;MQ0=3;MQRankSum=-14.681;QD=26.64;ReadPosRankSum=3.852;VQSLOD=0.6970;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:38,13:51:99:1069,0,7174	0/1:7,3:10:99:322,0,1785	0/0:37,0:30:84.29:0,84,3853	0/0:28,0:22:54.18:0,54,2076	0/1:29,12:41:99:1497,0,5474	0/1:28,6:34:99:642,0,5690	0/1:26,9:34:99:645,0,4867	0/1:51,11:61:99:1538,0,6431	0/1:29,8:37:99:774,0,6083	0/1:28,9:37:99:1313,0,6728	0/1:27,15:42:99:1608,0,5194	0/1:26,14:39:99:1995,0,4838	0/1:40,16:56:99:1953,0,7472	0/1:27,7:34:99:819,0,5669	0/1:33,12:45:99:1644,0,7144	0/1:29,20:48:99:3182,0,5882	0/0:30,0:30:87.30:0,87,8380	0/0:20,0:20:60.21:0,60,5288	0/1:23,5:26:99:414,0,2685	0/1:34,8:42:99:672,0,7570	0/1:32,5:36:99:144,0,5352	0/1:30,9:39:99:314,0,6496	0/1:29,10:39:99:882,0,6020	0/1:24,8:32:99:452,0,4304	0/1:19,8:27:99:853,0,3836	0/1:33,4:37:99:456,0,7552	0/1:37,8:45:99:759,0,7342	0/1:9,3:12:99:322,0,2061
chr10	28831897	.	C	CGGGGG	16115.51	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-1.528;DP=587;FS=29.060;HRun=5;HaplotypeScore=164.8716;InbreedingCoeff=0.9428;MQ=53.09;MQ0=44;MQRankSum=-7.831;QD=40.49;ReadPosRankSum=-2.236;VQSLOD=0.3483;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,6:21:42.13:972,42,0	1/1:5,1:7:9.03:237,9,0	0/0:59,0:9:20.84:0,21,240	0/0:68,0:17:35.86:0,36,608	1/1:6,8:16:20.96:583,21,0	1/1:8,1:14:23.68:387,24,0	1/1:10,5:21:48.13:999,48,0	1/1:8,4:13:28.27:576,28,0	1/1:15,2:20:48.15:1168,48,0	1/1:9,3:15:39.41:786,39,0	1/1:9,7:16:30.10:829,30,0	1/1:10,5:23:44.18:891,44,0	1/1:15,3:23:36.12:789,36,0	1/1:8,3:13:33.11:711,33,0	1/1:12,6:28:58.06:1191,58,0	1/1:7,1:9:21.07:524,21,0	0/0:35,0:35:44.43:0,44,741	0/0:25,0:25:48.09:0,48,791	1/1:11,0:14:34.34:648,34,0	1/1:16,2:20:25.14:488,25,0	1/1:14,0:17:21.01:328,21,0	1/1:8,4:16:24.08:604,24,0	1/1:10,0:12:14.96:320,15,0	1/1:12,0:15:17.71:346,18,0	1/1:6,7:20:27.09:752,27,0	1/1:22,3:26:58.87:1022,59,0	1/1:6,5:12:36.10:827,36,0	1/1:1,0:2:6.02:138,6,0
chr10	28831902	.	G	GA	282.89	PASS	AB=0.862;AC=4;AF=0.071;AN=56;BaseQRankSum=-3.328;DP=534;FS=0.927;HRun=14;HaplotypeScore=108.5818;InbreedingCoeff=-0.0388;MQ=57.10;MQ0=38;MQRankSum=1.578;QD=1.48;ReadPosRankSum=3.676;VQSLOD=-0.3163;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:22:14.76:0,15,63	0/0:6,0:7:3.71:0,4,11	0/1:63,0:13:0.94:1,0,88	0/1:65,0:18:3.77:4,0,130	0/0:14,0:16:1.44:0,1,9	0/0:14,0:14:13.48:0,13,51	0/0:20,0:20:26.66:0,27,124	0/0:11,0:12:8.34:0,8,34	0/0:16,0:17:21.27:0,21,110	0/0:11,0:11:12.98:0,13,49	0/0:12,0:12:7.52:0,8,39	0/0:18,0:21:6.15:0,6,62	0/0:18,0:18:9.34:0,9,56	0/0:11,0:12:2:0,2,25	0/0:22,0:23:32.24:0,32,148	0/0:7,0:8:3.67:0,4,20	0/1:14,16:34:10.90:167,0,11	0/1:21,7:29:35.86:201,0,36	0/0:11,0:12:16.53:0,17,75	0/0:14,0:14:12.27:0,12,60	0/0:12,0:13:7.70:0,8,34	0/0:10,0:11:3.82:0,4,11	0/0:8,0:9:0.42:0,0,11	0/0:13,0:15:9.20:0,9,41	0/0:16,0:16:3.70:0,4,12	0/0:22,0:21:31.43:0,31,134	0/0:14,0:14:14.50:0,14,64	0/0:2,0:2:2.47:0,2,9
chr10	28832110	.	T	TG	27853.49	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=0.910;DP=726;FS=1.936;HRun=1;HaplotypeScore=97.0963;InbreedingCoeff=0.9997;MQ=86.83;MQ0=0;MQRankSum=-11.213;QD=41.20;ReadPosRankSum=6.142;VQSLOD=4.5365;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,54:54:99:2292,154,0	1/1:1,14:15:42.14:629,42,0	0/0:23,0:23:60.18:0,60,768	0/0:27,0:27:74.73:0,75,941	1/1:0,24:23:72.24:1079,72,0	1/1:1,25:26:69.23:1033,69,0	1/1:1,25:26:63.21:944,63,0	1/1:4,33:37:99:1487,102,0	1/1:0,26:26:72.24:1079,72,0	1/1:1,20:21:60.19:879,60,0	1/1:0,22:22:63.21:943,63,0	1/1:0,35:35:99:1483,99,0	1/1:2,35:37:99:1526,102,0	1/1:1,27:28:78.26:1169,78,0	1/1:1,29:30:87.29:1303,87,0	1/1:3,25:27:69.23:1034,69,0	1/1:0,26:25:78.26:1168,78,0	1/1:2,28:30:75.25:1124,75,0	1/1:1,26:27:78.25:1149,78,0	1/1:1,27:28:81.27:1212,81,0	1/1:1,26:27:69.23:1034,69,0	1/1:1,18:19:45.11:637,45,0	1/1:0,18:18:54.18:809,54,0	1/1:0,16:16:42.14:629,42,0	1/1:1,19:20:54.18:809,54,0	1/1:0,24:24:69.20:1008,69,0	1/1:0,21:21:63.21:943,63,0	1/1:0,11:11:30.10:450,30,0
chr10	28834094	.	A	AAAAC	1474.93	PASS	AB=1.000;AC=7;AF=0.140;AN=50;BaseQRankSum=-10.282;DP=638;FS=4.553;HRun=0;HaplotypeScore=269.1491;InbreedingCoeff=0.5014;MQ=61.13;MQ0=9;MQRankSum=0.932;QD=14.18;ReadPosRankSum=-0.138;VQSLOD=2.6163;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:28:0.20:0,0,35	0/0:10,0:10:9.01:0,9,84	./.	./.	0/0:20,0:20:2.64:0,3,50	0/0:17,0:17:22.88:0,23,215	0/0:19,0:19:2.32:0,2,6	./.	0/0:24,0:24:27.72:0,28,299	0/0:20,0:20:20.35:0,20,176	0/0:15,0:15:10.73:0,11,156	0/0:31,0:31:39.70:0,40,367	0/0:29,0:29:39.20:0,39,362	0/0:30,0:30:33.89:0,34,301	0/0:29,0:29:26.95:0,27,241	0/0:23,0:23:29.28:0,29,281	1/1:16,19:35:36.12:847,36,0	1/1:11,12:23:2.64:731,3,0	0/0:16,0:15:10.73:0,11,89	0/0:17,0:17:5.58:0,6,102	0/0:23,0:23:5.09:0,5,50	0/0:23,0:23:26.14:0,26,273	0/0:19,0:19:3.47:0,3,101	1/1:18,0:18:0.89:2,1,0	0/0:22,0:22:38.28:0,38,361	0/0:27,0:27:22.42:0,22,218	0/0:22,0:22:16.99:0,17,164	0/0:7,0:7:4.38:0,4,55
chr10	28834118	.	CAAACAAACAAA	C	14523.08	PASS	AB=0.763;AC=24;AF=0.429;AN=56;BaseQRankSum=16.088;DP=605;FS=0.664;HRun=0;HaplotypeScore=311.2694;InbreedingCoeff=-0.5876;MQ=42.22;MQ0=9;MQRankSum=-8.270;QD=31.23;ReadPosRankSum=13.075;VQSLOD=1.5999;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:23,4:27:99:363,0,155	0/1:8,3:11:40.91:263,0,41	0/0:27,0:13:20.15:0,20,664	0/0:17,0:9:27.02:0,27,390	0/1:12,7:19:65.06:290,0,65	0/1:7,8:15:17.14:720,0,17	0/1:15,2:17:57.05:57,0,208	0/0:35,0:34:58.31:0,58,317	0/1:16,12:28:34.85:1176,0,35	0/1:12,7:19:49.51:627,0,50	0/1:10,7:17:64.18:596,0,64	0/1:15,14:29:6.85:1301,0,7	0/1:16,12:28:65.09:1135,0,65	0/1:16,11:27:27.12:1160,0,27	0/1:14,9:23:47.53:780,0,48	1/1:10,10:20:21.24:1062,21,0	0/0:35,0:35:81.24:0,81,3030	0/0:25,0:26:72.18:0,72,2682	0/1:12,3:15:81.27:378,0,81	0/1:12,4:14:32.93:432,0,33	0/1:15,2:17:99:112,0,196	0/1:8,13:21:22.39:876,0,22	0/1:10,4:14:47.05:465,0,47	0/1:21,1:22:78.42:78,0,240	0/1:9,14:23:27.36:1140,0,27	0/1:16,8:24:99:708,0,120	0/1:18,5:23:81.59:553,0,82	0/1:8,2:10:72.93:250,0,73
chr10	28834127	.	A	AAC	3149.06	PASS	AB=0.894;AC=24;AF=0.429;AN=56;BaseQRankSum=-1.828;DP=584;FS=17.874;HRun=0;HaplotypeScore=260.8259;InbreedingCoeff=-0.7501;MQ=50.94;MQ0=8;MQRankSum=-7.529;QD=6.69;ReadPosRankSum=-7.701;VQSLOD=0.5213;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:20,4:24:99:275,0,266	0/1:10,1:11:86.11:86,0,121	0/0:32,0:19:48.15:0,48,680	0/0:19,0:11:24.08:0,24,347	0/1:14,3:17:99:215,0,162	0/1:17,2:19:65.13:65,0,239	0/1:11,2:13:99:133,0,203	0/1:29,0:28:99:190,0,420	0/1:23,4:27:99:293,0,309	0/1:16,1:17:99:147,0,180	0/1:17,2:19:95.44:95,0,265	0/1:23,3:26:99:188,0,281	0/1:23,1:24:99:111,0,295	0/1:23,3:26:99:255,0,272	0/1:22,1:23:99:170,0,228	0/1:14,4:18:99:180,0,172	0/0:36,0:36:73.96:0,74,676	0/0:26,0:26:65.66:0,66,642	0/1:15,3:18:99:118,0,313	0/1:12,3:13:99:156,0,105	0/1:16,2:18:46.82:47,0,282	0/1:20,1:21:25.90:26,0,315	0/1:8,5:13:99:137,0,166	0/1:17,2:19:41.69:42,0,352	0/1:21,1:22:81.16:81,0,278	0/1:21,1:22:52.16:52,0,373	0/1:19,2:21:99:131,0,244	0/1:7,2:9:99:116,0,133
chr10	28839206	.	G	GTT	2865.33	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-6.905;DP=924;FS=3.325;HRun=0;HaplotypeScore=108.5225;InbreedingCoeff=1.0000;MQ=86.40;MQ0=0;MQRankSum=-5.702;QD=54.06;ReadPosRankSum=1.206;VQSLOD=4.0951;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,151,2448	0/0:19,0:19:57.19:0,57,907	0/0:29,0:29:84.25:0,84,1252	0/0:31,0:32:90.16:0,90,1283	0/0:23,0:22:69.22:0,69,1094	0/0:21,0:21:60.20:0,60,978	0/0:22,0:22:66.23:0,66,1071	0/0:34,0:34:99:0,99,1569	0/0:36,0:36:99:0,105,1663	0/0:35,0:35:99:0,102,1665	0/0:25,0:25:75.26:0,75,1222	0/0:44,0:44:99:0,129,2076	0/0:55,0:55:99:0,163,2606	0/0:48,0:48:99:0,144,2290	0/0:52,0:52:99:0,150,2372	0/0:36,0:36:99:0,108,1714	1/1:0,27:27:78.27:1585,78,0	1/1:1,25:26:69.24:1402,69,0	0/0:17,0:17:48.16:0,48,783	0/0:44,0:44:99:0,123,1974	0/0:36,0:36:99:0,105,1711	0/0:33,0:33:96.33:0,96,1564	0/0:29,0:29:87.28:0,87,1395	0/0:27,0:27:81.19:0,81,1264	0/0:36,0:36:99:0,108,1761	0/0:29,0:29:87.30:0,87,1415	0/0:44,0:44:99:0,126,2051	0/0:14,0:14:42.07:0,42,607
chr10	28840532	.	T	TA	5870.86	PASS	AB=0.618;AC=44;AF=0.786;AN=56;BaseQRankSum=-4.956;DP=474;FS=11.124;HRun=12;HaplotypeScore=50.8047;InbreedingCoeff=0.4633;MQ=68.35;MQ0=5;MQRankSum=-1.337;QD=14.46;ReadPosRankSum=-0.510;VQSLOD=4.3430;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,17:22:35.93:336,36,0	1/1:3,2:5:6.01:58,6,0	0/0:19,0:6:2.32:0,2,12	0/0:14,0:7:10.42:0,10,46	1/1:10,18:29:31.99:446,32,0	0/1:6,15:21:1.75:308,0,2	0/1:5,12:17:10.75:230,0,11	1/1:3,20:23:41.15:545,41,0	1/1:5,10:15:2.13:182,2,0	1/1:5,10:15:27.04:263,27,0	1/1:9,18:28:47.74:420,48,0	1/1:3,8:12:17.86:160,18,0	1/1:4,12:16:21.03:204,21,0	1/1:1,9:11:20.87:189,21,0	1/1:3,9:13:29.88:277,30,0	1/1:4,14:18:33.04:315,33,0	0/0:19,0:18:50.62:0,51,365	0/0:15,0:15:8.83:0,9,66	1/1:10,14:23:20.12:340,20,0	0/1:6,5:11:3.97:109,0,4	1/1:4,10:13:21.03:204,21,0	0/1:3,5:8:6.93:92,0,7	1/1:7,8:15:2.11:176,2,0	1/1:4,17:21:11.14:269,11,0	1/1:8,8:16:17.70:157,18,0	1/1:10,10:20:30.04:286,30,0	1/1:11,14:25:11.10:259,11,0	1/1:3,4:7:5.85:43,6,0
chr10	28841880	.	AT	A	2568.45	PASS	AB=0.617;AC=45;AF=0.804;AN=56;BaseQRankSum=-0.328;DP=524;FS=4.647;HRun=17;HaplotypeScore=62.3776;InbreedingCoeff=0.1401;MQ=74.20;MQ0=1;MQRankSum=2.015;QD=5.35;ReadPosRankSum=3.387;VQSLOD=2.3545;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:12,13:29:23.34:64,0,23	0/1:4,5:9:27.25:63,0,27	0/0:28,0:19:11.56:0,12,82	0/0:16,0:12:8.92:0,9,52	1/1:15,5:22:12.44:152,12,0	0/1:3,10:16:2.24:89,0,2	1/1:3,5:9:10.76:56,11,0	1/1:17,15:33:2.10:163,2,0	1/1:11,8:21:15.62:89,16,0	1/1:5,12:19:20.86:180,21,0	0/1:9,7:22:15.24:155,0,15	1/1:2,7:10:15.05:82,15,0	1/1:7,6:15:15.82:88,16,0	1/1:3,10:17:20.70:127,21,0	1/1:8,14:23:27.81:155,28,0	1/1:6,8:16:21.56:112,22,0	1/1:4,0:22:30.52:87,31,0	1/1:4,1:15:14.16:40,14,0	0/1:11,9:21:10.07:88,0,10	1/1:6,14:21:9.34:141,9,0	0/1:6,11:18:13.28:28,0,13	1/1:7,1:11:8.94:36,9,0	1/1:10,10:22:7.79:99,8,0	0/1:4,8:13:17.17:80,0,17	1/1:9,14:24:25.46:190,25,0	1/1:11,9:21:5.61:119,6,0	1/1:6,11:19:24.38:127,24,0	1/1:0,9:11:21.60:111,22,0
chr10	28842783	.	GTT	G	6156.05	PASS	AB=0.982;AC=30;AF=0.536;AN=56;BaseQRankSum=-3.922;DP=1025;FS=2.469;HRun=3;HaplotypeScore=212.0340;InbreedingCoeff=-0.8751;MQ=63.84;MQ0=8;MQRankSum=6.207;QD=6.01;ReadPosRankSum=8.549;VQSLOD=0.8477;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:57,0:54:30.59:385,0,31	1/1:23,0:23:20.39:232,20,0	0/1:30,0:20:99:217,0,235	0/1:47,0:31:99:226,0,421	0/1:51,0:51:99:178,0,269	0/1:28,0:28:99:144,0,170	0/1:32,0:31:99:231,0,124	0/1:47,0:45:99:324,0,421	0/1:32,0:32:99:114,0,482	0/1:9,28:36:25.87:429,0,26	0/1:27,0:27:99:152,0,105	0/1:31,0:29:99:226,0,109	0/1:28,0:28:99:133,0,148	0/1:43,0:43:89.27:203,0,89	0/1:48,1:48:63.94:287,0,64	0/1:44,0:44:37.46:267,0,37	0/1:36,0:36:99:195,0,552	0/1:31,0:31:77.04:77,0,730	0/1:20,0:19:99:194,0,116	0/1:43,0:43:99:148,0,226	0/1:41,0:40:99:133,0,118	0/1:23,0:23:97.97:131,0,98	0/1:34,1:35:32.37:210,0,32	0/1:50,0:50:16.37:358,0,16	0/1:37,0:37:58.32:229,0,58	0/1:42,0:42:99:293,0,217	0/1:40,0:39:67.62:182,0,68	1/1:21,0:21:7.46:259,7,0
chr10	28842785	.	TTG	T	4537.57	PASS	AB=0.829;AC=38;AF=0.679;AN=56;BaseQRankSum=-6.701;DP=1048;FS=4.135;HRun=0;HaplotypeScore=226.1995;InbreedingCoeff=0.4105;MQ=62.04;MQ0=9;MQRankSum=5.350;QD=5.38;ReadPosRankSum=-0.635;VQSLOD=3.9298;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:37,23:57:10.21:219,10,0	1/1:10,12:23:15.86:165,16,0	0/0:27,0:17:5.12:0,5,23	0/0:47,0:31:14.37:0,14,111	1/1:25,26:52:21.05:241,21,0	1/1:23,4:27:3.78:197,4,0	0/1:32,1:32:2.48:177,0,2	1/1:45,0:43:8.20:64,8,0	0/0:34,1:35:0.67:0,1,329	1/1:37,2:38:18.28:330,18,0	1/1:25,3:28:15.79:313,16,0	1/1:29,3:30:21.04:229,21,0	1/1:22,6:28:19.57:196,20,0	1/1:20,23:43:11.97:138,12,0	1/1:26,22:47:23.22:243,23,0	1/1:20,27:47:26.43:309,26,0	0/0:40,0:40:32.99:0,33,316	0/0:35,0:35:56.19:0,56,487	0/0:21,0:20:2.49:0,2,6	1/1:23,20:45:11.83:104,12,0	0/1:23,18:40:20.16:37,0,20	0/1:13,11:24:35.34:60,0,35	0/1:29,3:32:2.87:244,0,3	1/1:30,20:51:27.36:298,27,0	1/1:21,20:41:13.91:126,14,0	0/1:39,2:41:62.92:272,0,63	1/1:18,21:39:23.96:331,24,0	0/1:15,7:22:4.73:246,0,5
chr10	28842813	.	GTA	G	4686.62	PASS	AB=0.995;AC=32;AF=0.571;AN=56;BaseQRankSum=6.450;DP=1044;FS=33.014;HRun=0;HaplotypeScore=226.0016;InbreedingCoeff=-0.6999;MQ=50.00;MQ0=27;MQRankSum=0.588;QD=4.49;ReadPosRankSum=3.297;VQSLOD=2.9174;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:54,0:52:99:192,0,116	1/1:24,0:24:4.34:216,4,0	0/1:25,0:4:3.08:3,0,54	0/1:48,0:11:0.65:1,0,48	0/1:53,0:52:49.18:49,0,189	1/1:25,0:25:4.70:139,5,0	0/1:41,0:36:99:198,0,220	0/1:28,0:25:71.02:250,0,71	0/1:31,0:31:67.33:67,0,260	0/1:50,1:49:99:312,0,297	0/1:34,0:33:99:163,0,143	0/1:26,1:26:18.96:249,0,19	0/1:27,0:27:51.62:168,0,52	0/1:46,0:45:79.24:129,0,79	0/1:40,0:39:42.53:204,0,43	0/1:40,0:40:0.29:191,0,0	1/1:45,0:45:3.23:346,3,0	0/1:37,0:37:42.51:271,0,43	0/1:11,0:7:25.79:26,0,53	0/1:56,0:55:99:113,0,248	0/1:48,0:43:28.43:28,0,93	0/1:35,0:35:70.12:70,0,231	0/1:32,0:31:57.60:183,0,58	0/1:44,1:45:49.77:196,0,50	0/1:41,0:41:86.24:163,0,86	0/1:43,0:43:99:251,0,178	0/1:35,1:36:34.61:217,0,35	1/1:20,0:20:33.77:291,34,0
chr10	28844242	.	TCCACATCCTACCACAGAGACAG	T	46207.38	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=14.317;DP=520;FS=5.430;HRun=0;HaplotypeScore=334.0981;InbreedingCoeff=0.9517;MQ=73.66;MQ0=0;MQRankSum=-13.798;QD=110.28;ReadPosRankSum=8.116;VQSLOD=3.5507;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:7,23:30:60.21:3695,60,0	1/1:2,6:8:15.05:928,15,0	0/0:22,0:22:66.23:0,66,4859	0/0:38,0:38:99:0,111,7493	1/1:4,21:25:31.46:1818,31,0	1/1:4,15:19:33.11:2042,33,0	1/1:5,8:13:21.07:1300,21,0	1/1:6,7:13:21.05:487,21,0	1/1:1,13:14:36.12:2228,36,0	1/1:3,15:18:42.14:2325,42,0	1/1:5,14:19:42.14:2599,42,0	1/1:5,13:18:23.93:1485,24,0	1/1:2,17:19:42.13:2598,42,0	1/1:3,14:17:27.09:1671,27,0	1/1:2,21:23:51.17:3138,51,0	1/1:3,16:19:42.14:2599,42,0	0/0:24,0:24:69.24:0,69,6892	0/0:17,0:16:48.16:0,48,4273	1/1:4,12:16:36.11:1541,36,0	1/1:2,19:21:42.14:2599,42,0	1/1:7,9:16:12.04:611,12,0	1/1:2,12:14:27.09:1623,27,0	1/1:1,20:21:42.14:2481,42,0	1/1:4,11:15:15.52:915,16,0	1/1:6,16:22:42.14:2599,42,0	1/1:1,16:17:48.16:2697,48,0	1/1:2,14:16:29.71:1856,30,0	1/1:1,5:6:6.02:371,6,0
chr10	28845288	.	G	GAAT	523.78	PASS	AB=0.885;AC=9;AF=0.196;AN=46;BaseQRankSum=0.806;DP=272;FS=1.057;HRun=0;HaplotypeScore=40.6378;InbreedingCoeff=0.3045;MQ=66.62;MQ0=1;MQRankSum=-0.838;QD=7.94;ReadPosRankSum=-2.743;VQSLOD=1.7811;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:21:27.02:0,27,317	0/0:5,0:5:6.02:0,6,79	./.	./.	0/0:11,0:11:18.04:0,18,221	0/1:11,1:13:30.71:31,0,255	./.	0/0:32,0:31:6.02:0,6,79	0/0:8,0:8:9.03:0,9,119	0/0:5,0:5:6.02:0,6,79	0/0:5,0:5:6.02:0,6,79	0/0:6,0:6:3.01:0,3,40	0/0:14,0:14:12.04:0,12,159	0/0:14,0:14:12.04:0,12,159	0/0:9,0:10:21.04:0,21,259	0/0:3,0:4:5.99:0,6,61	1/1:8,0:15:15:161,15,0	1/1:8,0:11:3.01:39,3,0	1/1:7,3:11:12.02:197,12,0	0/1:5,3:8:27.68:158,0,28	0/0:2,0:2:3.01:0,3,40	./.	0/0:6,0:6:3.01:0,3,40	./.	0/0:8,0:8:21.07:0,21,278	0/1:8,0:8:30.71:72,0,31	0/0:10,0:10:18.06:0,18,238	0/0:13,0:13:9.03:0,9,119
chr10	28846603	.	A	AG	340.65	PASS	AB=0.792;AC=2;AF=0.036;AN=56;BaseQRankSum=6.332;DP=620;FS=3.900;HRun=4;HaplotypeScore=73.9813;InbreedingCoeff=-0.0384;MQ=84.97;MQ0=0;MQRankSum=6.317;QD=8.31;ReadPosRankSum=-3.444;VQSLOD=-0.5436;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:93.26:0,93,1055	0/0:10,0:10:30.09:0,30,340	0/1:15,7:22:99:255,0,252	0/1:15,4:19:99:174,0,184	0/0:17,0:17:51.15:0,51,579	0/0:19,0:19:48.14:0,48,544	0/0:17,0:17:42.12:0,42,476	0/0:35,0:35:90.23:0,90,1005	0/0:19,0:19:51.13:0,51,568	0/0:20,0:20:51.14:0,51,578	0/0:12,0:12:24.07:0,24,272	0/0:26,0:26:72.20:0,72,816	0/0:26,0:26:75.21:0,75,851	0/0:27,0:27:75.20:0,75,838	0/0:36,0:36:99:0,102,1145	0/0:10,0:10:24.07:0,24,272	0/0:38,0:38:99:0,105,1177	0/0:21,0:21:63.15:0,63,702	0/0:16,0:16:48.14:0,48,544	0/0:18,0:18:45.13:0,45,511	0/0:42,0:42:99:0,117,1327	0/0:10,0:10:27.08:0,27,306	0/0:13,0:13:39.11:0,39,437	0/0:38,0:38:99:0,105,1177	0/0:17,0:17:42.12:0,42,477	0/0:23,0:23:63.14:0,63,694	0/0:29,0:29:87.22:0,87,974	0/0:4,0:4:12.03:0,12,136
chr10	28846983	.	G	GC	24906.28	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-8.714;DP=615;FS=1.390;HRun=0;HaplotypeScore=54.7451;InbreedingCoeff=0.9560;MQ=87.49;MQ0=0;MQRankSum=-9.716;QD=43.39;ReadPosRankSum=6.153;VQSLOD=4.6990;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,36:36:93.32:1486,93,0	1/1:0,4:4:9.03:144,9,0	0/0:31,0:31:74.08:0,74,982	0/0:10,0:10:12.74:0,13,308	1/1:0,18:18:54.18:857,54,0	1/1:0,31:31:90.31:1438,90,0	1/1:1,20:21:51.17:815,51,0	1/1:1,30:31:90.28:1393,90,0	1/1:0,28:28:78.27:1243,78,0	1/1:0,21:21:54.18:864,54,0	1/1:0,15:15:39.13:623,39,0	1/1:0,28:28:75.26:1199,75,0	1/1:0,20:21:60.20:949,60,0	1/1:0,20:20:51.17:813,51,0	1/1:2,30:33:87.30:1380,87,0	1/1:2,25:27:69.24:1103,69,0	1/1:1,23:23:66.23:1055,66,0	1/1:0,11:11:27.09:431,27,0	1/1:0,24:24:72.22:1125,72,0	1/1:0,17:17:51.17:815,51,0	1/1:0,23:23:60.20:959,60,0	1/1:1,16:17:48.16:767,48,0	1/1:0,21:21:60.03:928,60,0	1/1:1,25:26:75.26:1199,75,0	1/1:0,21:21:57.19:911,57,0	1/1:1,18:19:54.18:863,54,0	1/1:3,25:28:72.18:1121,72,0	1/1:0,9:9:27.09:427,27,0
chr10	28849601	.	TTTG	T	3730.17	PASS	AB=1.000;AC=51;AF=0.911;AN=56;BaseQRankSum=-2.060;DP=446;FS=1.255;HRun=0;HaplotypeScore=97.4436;InbreedingCoeff=0.4183;MQ=58.18;MQ0=2;MQRankSum=3.600;QD=8.74;ReadPosRankSum=1.445;VQSLOD=3.2566;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:12,2:13:8.85:148,9,0	1/1:9,0:8:13.67:73,14,0	0/0:19,0:7:11.19:0,11,108	0/1:11,0:4:2.20:2,0,18	1/1:30,1:31:31.80:200,32,0	1/1:19,0:19:25.22:112,25,0	1/1:11,0:11:27.89:160,28,0	1/1:20,1:21:23.92:206,24,0	1/1:15,1:16:24.76:145,25,0	1/1:25,1:26:45.13:306,45,0	1/1:13,0:13:20.04:154,20,0	1/1:15,0:15:6:102,6,0	1/1:11,0:11:18.50:76,19,0	0/1:16,0:16:1.55:113,0,2	1/1:13,0:13:16.07:67,16,0	1/1:17,1:18:36.38:230,36,0	1/1:18,0:16:27.04:159,27,0	0/1:11,0:11:5.40:44,0,5	1/1:20,1:20:24.89:210,25,0	1/1:9,0:9:10.71:45,11,0	1/1:8,0:8:8.33:45,8,0	1/1:7,0:7:8.04:34,8,0	1/1:9,0:9:14.01:94,14,0	1/1:13,0:13:18.75:79,19,0	1/1:17,1:18:25.24:163,25,0	1/1:15,0:15:24.22:181,24,0	1/1:31,0:31:53.38:358,53,0	1/1:23,0:23:46.05:226,46,0
chr10	28849602	.	TTG	T	9182.12	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-1.612;DP=445;FS=0.000;HRun=0;HaplotypeScore=70.5993;InbreedingCoeff=0.8031;MQ=58.05;MQ0=2;MQRankSum=0.371;QD=22.23;ReadPosRankSum=2.546;VQSLOD=5.1964;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,4:13:3.17:287,3,0	1/1:5,4:8:22.17:211,22,0	0/0:20,0:7:14.21:0,14,140	0/0:11,0:5:5.43:0,5,34	1/1:7,23:30:59.28:532,59,0	1/1:2,17:19:35.77:420,36,0	1/1:7,4:11:32.80:342,33,0	1/1:22,1:23:31.21:395,31,0	1/1:15,1:16:37.28:398,37,0	1/1:19,7:26:65.08:682,65,0	1/1:9,3:12:21.43:222,21,0	1/1:12,3:15:42.28:378,42,0	1/1:7,4:11:21.95:272,22,0	1/1:13,3:16:23.25:425,23,0	1/1:5,7:12:18.53:235,19,0	1/1:12,6:18:50.90:522,51,0	1/1:18,0:16:36.85:374,37,0	1/1:11,0:11:23.46:180,23,0	1/1:16,3:18:43.72:360,44,0	1/1:2,7:9:14.91:171,15,0	1/1:6,2:8:21.71:186,22,0	1/1:0,7:7:11.97:136,12,0	1/1:1,8:9:14.98:161,15,0	1/1:2,11:13:21.07:273,21,0	1/1:13,6:19:21.30:380,21,0	1/1:13,2:15:28.57:267,29,0	1/1:20,10:30:77.72:777,78,0	1/1:8,15:23:52.02:597,52,0
chr10	28849603	.	TG	T	6809.24	PASS	AB=0.938;AC=51;AF=0.911;AN=56;BaseQRankSum=-0.518;DP=446;FS=1.034;HRun=1;HaplotypeScore=72.7780;InbreedingCoeff=0.7674;MQ=59.47;MQ0=2;MQRankSum=1.025;QD=16.49;ReadPosRankSum=1.922;VQSLOD=5.1332;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:14,1:14:0.19:203,0,0	1/1:8,1:8:21.73:170,22,0	0/0:19,0:7:14.19:0,14,138	0/0:14,0:6:5.96:0,6,44	1/1:24,5:29:58.70:413,59,0	1/1:17,2:19:35.69:279,36,0	1/1:8,3:11:32.72:254,33,0	1/1:24,0:24:29.14:375,29,0	1/1:9,8:17:39.82:268,40,0	1/1:29,0:29:71.98:564,72,0	1/1:12,0:12:21.82:158,22,0	1/1:14,1:15:44.15:347,44,0	1/1:5,5:10:20.85:155,21,0	1/1:9,7:16:31.66:292,32,0	1/1:7,5:12:18.70:122,19,0	1/1:15,3:18:52.20:352,52,0	1/1:11,7:16:40.57:312,41,0	1/1:8,3:11:28.42:215,28,0	1/1:16,2:17:42.03:298,42,0	1/1:7,1:8:14.88:121,15,0	1/1:9,0:9:20.95:127,21,0	1/1:7,0:7:11.91:92,12,0	1/1:9,0:9:14.86:105,15,0	1/1:11,2:13:20.77:140,21,0	1/1:17,1:18:15.23:235,15,0	1/1:12,1:14:29.93:251,30,0	1/1:27,3:30:79.83:606,80,0	1/1:19,3:22:52.63:357,53,0
chr10	28849910	.	CTCT	C	292.23	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=0.484;DP=432;FS=15.270;HRun=0;HaplotypeScore=81.9283;InbreedingCoeff=0.8647;MQ=69.36;MQ0=7;MQRankSum=-0.442;QD=14.61;ReadPosRankSum=-1.182;VQSLOD=2.0140;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:47.41:0,47,762	0/0:9,0:8:18.03:0,18,265	0/0:24,0:15:32.51:0,33,393	0/0:18,0:9:7.16:0,7,65	0/0:22,0:22:41.44:0,41,444	0/0:19,0:19:45.08:0,45,708	0/0:9,0:8:20.98:0,21,360	1/1:7,13:19:38.96:387,39,0	0/0:12,0:12:27.01:0,27,276	0/0:17,0:17:19.83:0,20,554	0/0:12,0:12:23.99:0,24,317	0/0:16,0:16:29.94:0,30,406	0/0:14,0:14:26.92:0,27,307	0/0:18,0:18:36.01:0,36,497	0/0:14,0:14:30.01:0,30,320	0/0:15,0:15:38.96:0,39,442	0/0:27,0:27:68.33:0,68,1016	0/0:9,0:9:24.07:0,24,395	0/0:16,0:16:40.75:0,41,549	0/0:11,0:11:18:0,18,255	0/0:10,0:9:17.98:0,18,226	0/0:7,0:7:18.04:0,18,318	0/0:10,0:10:21.01:0,21,243	0/0:17,0:17:35.93:0,36,485	0/0:17,0:17:27.04:0,27,426	0/0:18,0:18:42.07:0,42,546	0/0:20,0:20:35.98:0,36,484	0/0:8,0:8:14.99:0,15,169
chr10	28850961	.	CTT	C	4063.61	PASS	AB=0.695;AC=43;AF=0.768;AN=56;BaseQRankSum=-4.046;DP=515;FS=2.697;HRun=17;HaplotypeScore=73.6026;InbreedingCoeff=0.1766;MQ=64.08;MQ0=26;MQRankSum=1.779;QD=8.80;ReadPosRankSum=2.940;VQSLOD=1.2445;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:18,9:25:0.51:215,1,0	1/1:1,6:8:4.59:57,5,0	0/0:22,0:10:6.01:0,6,58	0/0:13,0:7:0:0,0,1	1/1:7,16:21:17.16:239,17,0	1/1:6,6:15:14.05:172,14,0	1/1:2,8:12:22.89:192,23,0	1/1:12,9:24:34.78:249,35,0	1/1:10,8:19:9.60:119,10,0	1/1:10,4:15:15.18:144,15,0	1/1:10,8:15:20.53:154,21,0	0/1:6,6:14:8.57:158,0,9	0/1:7,3:11:1.42:77,0,1	0/1:3,3:6:0.05:39,0,0	1/1:11,6:18:10.82:108,11,0	0/1:9,6:17:13.19:70,0,13	0/1:19,2:20:48.32:57,0,48	0/0:11,0:17:34.94:0,35,154	0/1:27,10:37:40.41:234,0,40	1/1:9,16:25:34.63:274,35,0	1/1:3,7:8:20.89:164,21,0	1/1:7,9:16:4.19:104,4,0	1/1:9,11:20:10.30:182,10,0	1/1:6,4:15:17.24:157,17,0	1/1:7,8:18:30.95:223,31,0	1/1:11,12:24:49.03:374,49,0	1/1:7,10:17:29.34:223,29,0	0/1:4,4:8:13.26:78,0,13
chr10	28851844	.	TAC	T	1279.74	PASS	AB=0.993;AC=15;AF=0.268;AN=56;BaseQRankSum=-8.841;DP=513;FS=11.466;HRun=0;HaplotypeScore=161.3099;InbreedingCoeff=-0.0364;MQ=59.19;MQ0=1;MQRankSum=1.670;QD=4.13;ReadPosRankSum=-3.232;VQSLOD=1.5780;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:19,0:19:8.71:9,0,280	0/0:11,0:11:4.04:0,4,221	0/0:13,0:12:18.75:0,19,236	0/0:18,0:14:28.85:0,29,338	0/1:26,1:27:67.74:68,0,352	0/0:15,0:15:13.49:0,13,254	0/1:7,0:7:49.69:50,0,71	0/1:38,0:38:22.42:22,0,443	0/0:14,0:14:30.92:0,31,296	0/1:23,1:24:33.23:33,0,453	0/0:26,0:26:6.34:0,6,387	0/0:23,0:23:30.30:0,30,503	0/0:15,0:15:32.64:0,33,349	0/1:19,0:19:30.08:30,0,289	0/0:17,0:17:18.51:0,19,363	0/1:21,0:21:8.51:9,0,306	1/1:10,17:26:49.32:627,49,0	1/1:1,15:16:36.12:478,36,0	0/0:10,0:10:27:0,27,288	0/1:32,0:32:15.76:16,0,478	0/0:11,0:11:11.87:0,12,119	0/0:3,0:3:4.25:0,4,37	0/0:15,0:15:31.60:0,32,307	0/0:5,0:5:9.60:0,10,69	0/1:26,0:26:26.41:26,0,534	0/1:23,0:23:42.14:42,0,416	0/1:31,0:31:34.66:35,0,528	0/0:7,0:7:18.02:0,18,171
chr10	28851871	.	A	AAGAGAGAG	28160.39	PASS	AB=1.000;AC=53;AF=0.946;AN=56;BaseQRankSum=-3.968;DP=558;FS=2.987;HRun=0;HaplotypeScore=146.5370;InbreedingCoeff=0.6653;MQ=60.04;MQ0=1;MQRankSum=-2.266;QD=52.44;ReadPosRankSum=3.453;VQSLOD=5.0113;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,9:23:29.99:1043,30,0	1/1:4,5:15:21.02:686,21,0	0/1:12,0:8:1.42:1,0,24	0/0:21,0:18:18.36:0,18,359	1/1:11,9:22:18.06:674,18,0	1/1:3,8:16:24.08:986,24,0	1/1:5,2:11:6.77:353,7,0	1/1:16,7:38:66.22:2256,66,0	1/1:6,7:19:21.07:848,21,0	1/1:6,17:28:53.84:2174,54,0	1/1:10,5:17:15.05:528,15,0	1/1:9,12:33:36.12:1387,36,0	1/1:6,6:19:21.07:884,21,0	1/1:6,13:26:33.11:1330,33,0	1/1:3,11:20:33.11:1284,33,0	1/1:1,13:17:30.10:1252,30,0	1/1:8,15:25:39.13:1513,39,0	1/1:6,5:12:21.07:794,21,0	1/1:7,4:14:24.08:786,24,0	1/1:13,14:33:33.11:1295,33,0	1/1:6,4:15:6.02:238,6,0	1/1:1,5:10:15.05:594,15,0	1/1:7,4:14:12.04:473,12,0	1/1:3,5:12:12.03:443,12,0	1/1:9,13:23:39.13:1512,39,0	1/1:4,14:21:51.14:1878,51,0	1/1:14,17:32:69.24:2629,69,0	1/1:8,1:9:12.04:315,12,0
chr10	28856810	.	T	TG	14209.75	PASS	AB=0.559;AC=47;AF=0.839;AN=56;BaseQRankSum=-5.128;DP=625;FS=1.040;HRun=8;HaplotypeScore=108.3524;InbreedingCoeff=0.8823;MQ=87.33;MQ0=0;MQRankSum=-5.418;QD=25.98;ReadPosRankSum=2.149;VQSLOD=4.5457;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,25:29:68.80:795,69,0	1/1:0,9:10:26.91:289,27,0	0/0:22,0:22:45:0,45,411	0/0:22,0:22:43.24:0,43,383	1/1:6,25:31:57.17:657,57,0	1/1:3,20:23:51.15:589,51,0	1/1:3,15:18:45.13:519,45,0	1/1:8,23:31:60.17:682,60,0	1/1:3,12:15:39.12:448,39,0	1/1:10,12:23:14.63:397,15,0	1/1:3,16:21:47.82:530,48,0	1/1:3,17:20:45.05:502,45,0	1/1:3,11:14:36.10:407,36,0	1/1:3,16:19:42.12:485,42,0	1/1:5,33:38:87.25:996,87,0	1/1:1,17:19:53.99:603,54,0	0/0:1,0:21:40.74:0,41,120	0/0:3,0:13:18.33:0,18,54	1/1:7,10:17:33.07:367,33,0	1/1:4,27:32:75.22:865,75,0	1/1:2,23:27:72.05:811,72,0	1/1:2,20:22:48.04:554,48,0	1/1:3,24:27:44.75:769,45,0	0/1:4,15:19:6.75:437,0,7	1/1:6,13:20:39.07:435,39,0	1/1:1,23:24:69.16:780,69,0	1/1:6,27:31:75.22:861,75,0	1/1:1,13:15:38.98:430,39,0
chr10	28857580	.	T	TA	20072.46	PASS	AB=0.600;AC=53;AF=0.946;AN=56;BaseQRankSum=-2.741;DP=508;FS=2.438;HRun=1;HaplotypeScore=103.5879;InbreedingCoeff=0.5131;MQ=56.34;MQ0=0;MQRankSum=-2.959;QD=39.75;ReadPosRankSum=1.853;VQSLOD=5.0674;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,30:36:92.98:1175,93,0	1/1:0,2:2:6.02:90,6,0	0/1:3,6:9:11.88:298,0,12	0/0:3,0:3:5.81:0,6,47	1/1:2,22:24:60.11:830,60,0	1/1:1,15:16:45.12:649,45,0	1/1:1,19:20:60.12:841,60,0	1/1:3,30:33:99:1438,99,0	1/1:2,16:18:48.16:718,48,0	1/1:1,19:20:60.20:893,60,0	1/1:2,13:15:39.09:558,39,0	1/1:0,16:16:45.15:673,45,0	1/1:3,19:22:60.19:880,60,0	1/1:0,19:19:51.17:762,51,0	1/1:0,17:17:51.17:763,51,0	1/1:1,17:17:54.18:808,54,0	1/1:2,18:20:57.10:784,57,0	1/1:1,6:7:21.05:293,21,0	1/1:4,16:20:54.18:808,54,0	1/1:4,21:25:69.18:988,69,0	1/1:4,18:22:47.99:614,48,0	1/1:1,13:14:39.13:584,39,0	1/1:0,13:13:36.08:514,36,0	1/1:1,13:14:30.10:449,30,0	1/1:4,16:20:57.15:808,57,0	1/1:1,33:33:99:1464,99,0	1/1:2,17:19:57.19:851,57,0	1/1:0,12:12:36.12:539,36,0
chr10	28859673	.	G	GTT	873.31	PASS	AB=1.000;AC=15;AF=0.278;AN=54;BaseQRankSum=-3.016;DP=339;FS=18.195;HRun=9;HaplotypeScore=68.9254;InbreedingCoeff=0.3124;MQ=78.92;MQ0=4;MQRankSum=-4.942;QD=6.88;ReadPosRankSum=2.072;VQSLOD=-0.2724;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:10.53:0,11,85	./.	0/0:35,0:17:29.25:0,29,227	0/0:24,0:17:28.04:0,28,216	0/0:11,0:11:2.09:0,2,24	0/1:15,0:15:4.23:4,0,25	0/1:10,0:9:10.54:14,0,11	0/0:17,0:17:14.08:0,14,78	0/1:9,0:9:3.47:3,0,17	0/0:12,0:12:3.88:0,4,35	0/0:7,0:7:3.72:0,4,13	0/1:5,0:5:4.06:4,0,24	0/1:14,0:14:6.09:6,0,8	0/0:8,0:8:7.02:0,7,24	0/0:8,0:8:7.99:0,8,59	0/0:10,0:10:2.89:0,3,27	1/1:3,18:25:44.11:575,44,0	1/1:4,12:17:24.08:369,24,0	0/0:9,0:8:4.30:0,4,39	0/1:11,0:11:0.46:0,0,13	0/1:6,0:6:0:0,0,0	1/1:2,0:2:1.55:4,2,0	0/0:7,0:7:6.52:0,7,46	0/0:6,0:6:10.28:0,10,49	0/0:8,0:8:7.90:0,8,40	0/0:18,0:18:36.08:0,36,190	1/1:13,0:12:6.37:33,6,0	0/0:10,0:10:11.17:0,11,46
chr10	28859681	.	T	TGG	4034.06	PASS	AB=0.600;AC=43;AF=0.827;AN=52;BaseQRankSum=-5.423;DP=339;FS=0.632;HRun=0;HaplotypeScore=64.7165;InbreedingCoeff=0.6701;MQ=84.08;MQ0=4;MQRankSum=-4.141;QD=18.17;ReadPosRankSum=3.695;VQSLOD=3.4799;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,13:19:24.91:411,25,0	./.	0/0:42,0:24:55.11:0,55,614	0/0:24,0:16:29.12:0,29,334	1/1:2,6:10:13.64:213,14,0	1/1:2,12:19:8.03:170,8,0	1/1:0,7:11:17.99:238,18,0	1/1:5,5:13:12.24:227,12,0	1/1:5,7:13:7.02:304,7,0	1/1:7,3:10:7.94:133,8,0	1/1:2,4:6:5.74:89,6,0	1/1:6,3:9:7.40:117,7,0	1/1:1,10:13:18.05:268,18,0	1/1:1,4:8:8.69:100,9,0	1/1:2,5:8:20.79:288,21,0	1/1:1,8:9:8.72:135,9,0	0/0:26,0:26:37.98:0,38,270	0/0:16,0:16:22.20:0,22,104	1/1:4,2:6:12.01:153,12,0	1/1:3,4:8:14.92:205,15,0	./.	0/1:1,1:3:13.85:33,0,14	1/1:4,1:6:7.14:69,7,0	1/1:1,2:5:11.89:125,12,0	1/1:2,2:6:3.53:58,4,0	1/1:2,1:17:36.73:256,37,0	1/1:2,8:12:16.10:272,16,0	1/1:2,4:8:14.88:171,15,0
chr10	28859682	.	T	TGGG	4561.45	PASS	AC=44;AF=0.846;AN=52;BaseQRankSum=-5.538;DP=322;FS=5.536;HRun=8;HaplotypeScore=68.6434;InbreedingCoeff=0.7967;MQ=84.25;MQ0=4;MQRankSum=-4.910;QD=21.93;ReadPosRankSum=0.999;VQSLOD=2.0757;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:19:33.08:437,33,0	./.	0/0:42,0:24:39.69:0,40,421	0/0:24,1:17:23.52:0,24,264	1/1:7,1:8:15.05:222,15,0	1/1:15,0:15:12.04:180,12,0	1/1:10,0:9:17.97:232,18,0	1/1:15,0:14:21.03:317,21,0	1/1:12,1:13:30.69:371,31,0	1/1:7,0:7:9.03:131,9,0	1/1:7,0:7:5.97:88,6,0	1/1:6,2:8:12.03:178,12,0	1/1:13,0:13:24.08:358,24,0	1/1:7,0:7:8.52:98,9,0	1/1:9,1:10:24.08:390,24,0	1/1:9,0:9:9.03:128,9,0	0/0:24,0:24:53.91:0,54,501	0/0:15,0:15:23.67:0,24,247	1/1:6,0:5:12.04:238,12,0	1/1:6,0:6:14.88:184,15,0	./.	1/1:1,1:2:3.01:59,3,0	1/1:8,0:8:8.90:127,9,0	1/1:5,0:5:11.85:122,12,0	1/1:6,0:6:5.91:60,6,0	1/1:14,0:14:31.65:232,32,0	1/1:10,1:10:18.06:237,18,0	1/1:8,1:9:14.93:174,15,0
chr10	28862657	.	GATAT	G	895.41	PASS	AB=0.767;AC=20;AF=0.667;AN=30;BaseQRankSum=-3.251;DP=160;FS=6.787;HRun=0;HaplotypeScore=27.6011;InbreedingCoeff=0.2791;MQ=37.64;MQ0=19;MQRankSum=-1.510;QD=10.53;ReadPosRankSum=1.901;VQSLOD=0.8524;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,1:3:2.62:49,3,0	./.	./.	./.	./.	0/1:4,0:7:6.65:28,0,7	./.	1/1:11,7:15:10.78:346,11,0	./.	1/1:4,0:4:3:26,3,0	./.	1/1:6,0:5:3.01:30,3,0	0/1:4,0:4:8.32:37,0,8	0/0:3,0:3:2.97:0,3,10	0/0:1,0:2:3.62:0,4,11	./.	0/0:7,0:7:10.51:0,11,92	0/0:6,0:5:2.22:0,2,7	1/1:6,2:6:6.02:89,6,0	./.	./.	./.	1/1:5,0:5:3.01:45,3,0	./.	./.	1/1:6,0:6:3.01:44,3,0	1/1:9,0:10:6.01:77,6,0	1/1:6,3:9:15.05:233,15,0
chr10	28862671	.	TA	T	373.85	PASS	AB=0.932;AC=14;AF=0.467;AN=30;BaseQRankSum=-2.948;DP=107;FS=1.364;HRun=2;HaplotypeScore=23.8466;InbreedingCoeff=0.3391;MQ=49.63;MQ0=13;MQRankSum=-1.922;QD=8.31;ReadPosRankSum=-1.683;VQSLOD=0.4560;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,0:2:1.59:8,2,0	./.	./.	0/0:28,0:5:4.25:0,4,38	./.	0/0:4,0:4:6.91:0,7,78	./.	0/1:16,3:17:12.67:123,0,13	1/1:1,0:1:2.60:10,3,0	0/0:0,1:1:2.50:0,2,9	./.	0/0:2,0:1:3:0,3,26	0/0:3,0:2:4.80:0,5,26	./.	./.	./.	1/1:4,4:8:17.91:194,18,0	1/1:3,1:4:9.03:115,9,0	0/0:4,0:2:1.55:0,2,4	./.	./.	./.	0/0:1,0:1:1.55:0,2,4	./.	./.	1/1:2,0:2:1.82:5,2,0	0/1:3,0:3:0.34:5,0,0	1/1:6,0:5:2.18:20,2,0
chr10	28862672	.	A	AT	415.85	PASS	AB=1.000;AC=11;AF=0.393;AN=28;BaseQRankSum=-2.702;DP=105;FS=0.000;HRun=1;HaplotypeScore=23.0610;InbreedingCoeff=0.2417;MQ=49.94;MQ0=13;MQRankSum=-2.605;QD=9.90;ReadPosRankSum=-0.990;VQSLOD=0.5864;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,0:2:1.59:8,2,0	./.	./.	0/0:27,0:5:4.25:0,4,38	./.	0/0:4,0:4:6.91:0,7,82	./.	0/1:18,0:16:16.28:132,0,16	1/1:1,0:1:2.60:10,3,0	0/0:1,0:1:2.98:0,3,21	./.	0/0:2,0:1:3.01:0,3,38	0/0:3,0:2:5.45:0,5,28	./.	./.	./.	1/1:4,4:8:18.06:240,18,0	1/1:1,3:4:9.03:112,9,0	0/0:4,0:2:2.94:0,3,18	./.	./.	./.	0/0:1,0:1:2.94:0,3,18	./.	./.	./.	0/1:3,0:3:0.34:5,0,0	0/1:6,0:5:15.39:15,0,23
chr10	28862682	.	TA	T	555.19	PASS	AB=0.740;AC=18;AF=0.500;AN=36;BaseQRankSum=-2.728;DP=98;FS=13.858;HRun=2;HaplotypeScore=24.9254;InbreedingCoeff=0.2558;MQ=75.23;MQ0=7;MQRankSum=-1.487;QD=13.22;ReadPosRankSum=0.678;VQSLOD=0.6549;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,1:3:1.48:35,1,0	./.	0/0:11,0:3:3.01:0,3,39	0/0:24,1:7:7.07:0,7,85	./.	0/1:2,2:4:32.94:33,0,38	./.	0/1:10,3:12:17.87:178,0,18	1/1:0,1:1:2.99:23,3,0	0/0:1,0:1:3.01:0,3,32	./.	0/0:1,1:2:3.01:0,3,40	0/0:2,0:2:2.08:0,2,38	./.	./.	1/1:0,3:3:3.01:38,3,0	1/1:4,4:8:17.53:189,18,0	1/1:3,2:5:6.02:77,6,0	0/0:3,0:1:3.01:0,3,40	./.	1/1:0,1:1:3.01:38,3,0	./.	0/0:1,0:1:3.01:0,3,40	./.	./.	1/1:1,0:1:3:27,3,0	1/1:2,1:3:3.01:38,3,0	0/0:6,0:5:5.99:0,6,85
chr10	28862683	.	A	AT	686.97	PASS	AB=0.649;AC=18;AF=0.500;AN=36;BaseQRankSum=-2.920;DP=99;FS=11.247;HRun=1;HaplotypeScore=24.1944;InbreedingCoeff=0.2518;MQ=75.46;MQ0=7;MQRankSum=-1.195;QD=18.08;ReadPosRankSum=1.680;VQSLOD=2.3653;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,0:3:1.52:35,2,0	./.	0/0:11,0:3:3.01:0,3,40	0/0:25,0:7:6.86:0,7,82	./.	0/0:5,0:5:0.32:0,0,35	./.	0/1:5,5:11:9.98:294,0,10	1/1:2,0:2:3.01:48,3,0	0/0:1,0:1:3.01:0,3,32	./.	0/0:2,0:2:3:0,3,40	0/1:1,0:2:21.42:21,0,34	./.	./.	1/1:3,0:3:3.01:38,3,0	1/1:4,3:7:15.05:193,15,0	1/1:2,2:4:6.02:74,6,0	0/0:4,0:2:3.01:0,3,40	./.	1/1:1,0:1:3.01:38,3,0	./.	0/0:1,0:1:3.01:0,3,40	./.	./.	1/1:1,0:1:3:27,3,0	1/1:3,0:3:3.01:38,3,0	0/0:8,0:7:5.98:0,6,78
chr10	28862960	.	TA	T	7395.33	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=1.677;DP=390;FS=3.453;HRun=10;HaplotypeScore=43.0603;InbreedingCoeff=0.8474;MQ=65.28;MQ0=0;MQRankSum=0.526;QD=21.44;ReadPosRankSum=-0.823;VQSLOD=5.2875;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,17:21:53.02:449,53,0	1/1:0,9:9:24:208,24,0	0/0:4,0:2:3:0,3,29	0/0:6,0:5:5.92:0,6,40	1/1:2,19:21:23.83:436,24,0	1/1:1,22:23:53.99:469,54,0	1/1:0,8:8:18:156,18,0	1/1:8,23:31:65.98:573,66,0	1/1:0,17:17:47.99:417,48,0	1/1:2,11:13:32.99:287,33,0	1/1:1,13:14:35.99:313,36,0	1/1:0,9:9:24:208,24,0	1/1:0,19:19:47.99:417,48,0	1/1:0,16:16:44.99:391,45,0	1/1:1,14:16:32.03:266,32,0	1/1:2,6:8:14.99:130,15,0	0/0:23,0:23:59.24:0,59,651	0/0:12,0:12:36.08:0,36,388	1/1:2,20:22:59.98:521,60,0	1/1:2,13:15:35.91:299,36,0	1/1:0,1:1:3:26,3,0	1/1:0,4:4:12:104,12,0	1/1:1,9:10:23.99:208,24,0	1/1:0,10:10:26.99:234,27,0	1/1:0,11:11:29.99:260,30,0	1/1:2,17:19:50.98:443,51,0	1/1:2,15:17:41.97:362,42,0	1/1:2,9:11:13.12:218,13,0
chr10	28863239	.	T	TGCCC	1206.03	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-4.584;DP=677;FS=3.134;HRun=0;HaplotypeScore=108.3121;InbreedingCoeff=0.9970;MQ=95.70;MQ0=0;MQRankSum=-3.034;QD=50.25;ReadPosRankSum=0.487;VQSLOD=4.7042;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:21:63.15:0,63,1063	0/0:8,0:8:24.08:0,24,427	0/0:29,0:29:75.19:0,75,1234	0/0:35,0:35:56.71:0,57,1106	0/0:26,0:26:69.23:0,69,1255	0/0:27,0:27:78.26:0,78,1426	0/0:33,0:33:99:0,99,1775	0/0:28,0:28:72.21:0,72,1188	0/0:36,0:36:93.28:0,93,1688	0/0:20,0:20:54.19:0,54,1006	0/0:14,0:14:39.13:0,39,727	0/0:23,0:23:69.21:0,69,1190	0/0:28,0:28:78.27:0,78,1447	0/0:27,0:27:78.24:0,78,1359	0/0:28,0:28:81.26:0,81,1479	0/0:31,0:31:90.28:0,90,1576	1/1:2,9:12:30.05:710,30,0	1/1:2,9:12:24.08:617,24,0	0/0:11,0:11:26.85:0,27,425	0/0:16,0:16:39.13:0,39,727	0/0:39,0:39:99:0,108,1973	0/0:16,0:16:45.14:0,45,809	0/0:23,0:23:63.16:0,63,1074	0/0:24,0:24:72.21:0,72,1272	0/0:22,0:22:63.22:0,63,1173	0/0:34,0:34:99:0,102,1899	0/0:37,0:36:96.29:0,96,1726	0/0:16,0:16:48.15:0,48,865
chr10	28864623	.	A	AAGAG	1580.29	PASS	AB=0.905;AC=43;AF=0.896;AN=48;BaseQRankSum=-2.510;DP=485;FS=6.466;HRun=0;HaplotypeScore=84.9982;InbreedingCoeff=0.0990;MQ=63.31;MQ0=12;MQRankSum=1.036;QD=4.00;ReadPosRankSum=-0.459;VQSLOD=1.1557;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:29:5.41:86,5,0	1/1:8,0:8:3.01:62,3,0	./.	./.	1/1:15,0:15:6:73,6,0	1/1:14,0:20:2.74:13,3,0	0/1:16,0:16:2.86:6,0,3	1/1:18,0:18:2.29:6,2,0	1/1:12,0:12:11.91:127,12,0	1/1:18,0:18:11.80:120,12,0	1/1:11,0:10:3:25,3,0	1/1:15,7:20:2.97:20,3,0	1/1:16,0:17:7.50:35,8,0	1/1:13,0:13:11.98:113,12,0	1/1:20,0:21:13.75:183,14,0	1/1:13,7:21:9.03:209,9,0	0/1:16,0:23:21.90:26,0,22	0/0:5,0:11:6.01:0,6,56	1/1:18,0:18:6.23:56,6,0	1/1:11,0:11:3:25,3,0	1/1:25,0:24:9:118,9,0	1/1:9,0:9:2.92:63,3,0	./.	1/1:15,6:23:4.69:202,5,0	1/1:13,0:13:3:25,3,0	1/1:17,0:17:6.49:93,6,0	0/1:9,0:14:6.59:7,0,23	./.
chr10	28864889	.	C	CT	1014.01	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.189;DP=605;FS=12.071;HRun=9;HaplotypeScore=67.8829;InbreedingCoeff=0.9848;MQ=72.83;MQ0=2;MQRankSum=-0.088;QD=19.50;ReadPosRankSum=0.944;VQSLOD=3.4258;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:40:99:0,105,910	0/0:13,0:13:38.99:0,39,337	0/0:36,0:22:37.82:0,38,286	0/0:36,0:26:13.90:0,14,256	0/0:16,0:16:35.03:0,35,292	0/0:30,0:30:83.98:0,84,729	0/0:24,0:24:62.08:0,62,513	0/0:27,0:27:65.92:0,66,564	0/0:18,0:18:47.98:0,48,416	0/0:22,0:22:56.98:0,57,494	0/0:13,0:13:32.91:0,33,277	0/0:20,0:20:53.98:0,54,468	0/0:12,0:12:20.97:0,21,179	0/0:15,0:15:35.98:0,36,313	0/0:29,0:29:71.96:0,72,625	0/0:24,0:24:65.99:0,66,572	1/1:7,20:27:25.15:505,25,0	1/1:3,22:24:57.15:630,57,0	0/0:23,0:23:41.94:0,42,361	0/0:18,0:18:32.96:0,33,283	0/0:11,0:11:29.98:0,30,260	0/0:10,0:10:26.98:0,27,233	0/0:14,0:14:32.98:0,33,286	0/0:21,0:21:53.97:0,54,468	0/0:12,0:12:32.97:0,33,281	0/0:26,0:26:68.98:0,69,599	0/0:31,0:30:71.94:0,72,620	0/0:11,0:11:29.99:0,30,260
chr10	28865185	.	T	TTCTCTCTC	10919.50	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-4.690;DP=497;FS=3.073;HRun=0;HaplotypeScore=125.9193;InbreedingCoeff=0.6486;MQ=58.94;MQ0=22;MQRankSum=-5.972;QD=29.83;ReadPosRankSum=-0.703;VQSLOD=4.2217;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,11:28:33.10:1058,33,0	1/1:4,5:9:8.83:337,9,0	0/0:46,0:15:23.68:0,24,303	0/0:66,0:24:1.92:0,2,213	1/1:11,11:23:14.94:471,15,0	1/1:7,4:13:9.03:312,9,0	1/1:7,10:17:15.05:431,15,0	1/1:9,0:10:5.99:81,6,0	1/1:4,0:8:11.99:226,12,0	1/1:11,15:26:48.62:1348,49,0	1/1:7,4:12:9.48:228,9,0	1/1:13,8:22:21.07:765,21,0	1/1:10,5:16:15.05:573,15,0	1/1:4,4:8:9.03:292,9,0	1/1:2,20:25:36.12:1345,36,0	1/1:7,7:15:9.03:332,9,0	0/0:10,0:11:20.94:0,21,482	0/0:7,0:7:15.02:0,15,334	1/1:1,0:2:6.02:109,6,0	1/1:8,8:16:12.04:488,12,0	1/1:13,11:26:2.68:23,3,0	1/1:7,6:14:6.02:250,6,0	1/1:5,5:12:5.89:252,6,0	1/1:5,10:16:3.01:118,3,0	1/1:2,3:6:12.04:396,12,0	1/1:10,3:15:33.08:835,33,0	1/1:5,6:10:15.05:445,15,0	1/1:4,0:6:8.96:206,9,0
chr10	28867234	.	TA	T	2163.43	PASS	AB=0.980;AC=45;AF=0.804;AN=56;BaseQRankSum=9.397;DP=509;FS=2.545;HRun=1;HaplotypeScore=205.0926;InbreedingCoeff=-0.0892;MQ=60.91;MQ0=0;MQRankSum=-4.153;QD=4.42;ReadPosRankSum=9.923;VQSLOD=-0.3422;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:29:9.05:156,9,0	1/1:5,0:5:11.22:35,11,0	0/1:14,0:14:25.36:25,0,126	0/0:19,0:19:6.25:0,6,282	1/1:16,0:16:29.21:95,29,0	1/1:20,0:20:15.79:93,16,0	0/1:19,0:19:5.01:75,0,5	0/1:33,0:33:39.41:109,0,39	1/1:11,0:11:5.27:47,5,0	1/1:21,1:22:8.07:105,8,0	1/1:14,1:15:28.71:104,29,0	1/1:29,0:29:5.20:117,5,0	1/1:13,0:13:5.75:66,6,0	1/1:21,0:21:25.09:110,25,0	1/1:18,0:18:16.46:91,16,0	0/1:21,0:21:17.65:74,0,18	1/1:17,0:17:12.36:80,12,0	0/1:14,0:14:5.86:48,0,6	1/1:14,0:13:8.15:72,8,0	0/1:13,2:15:5.70:93,0,6	1/1:20,0:20:3.79:74,4,0	0/1:15,1:16:16.58:63,0,17	1/1:22,0:22:2.72:107,3,0	1/1:21,0:21:32.74:101,33,0	1/1:23,0:23:51.48:172,51,0	0/1:18,0:18:5.42:84,0,5	0/1:18,0:17:7.61:74,0,8	1/1:6,0:6:9.69:30,10,0
chr10	28868362	.	CCTTCCTTCCTTCCTTG	C	512.21	PASS	AB=0.833;AC=3;AF=0.056;AN=54;BaseQRankSum=1.498;DP=198;FS=1.428;HRun=0;HaplotypeScore=113.7984;InbreedingCoeff=0.5641;MQ=47.99;MQ0=4;MQRankSum=-1.262;QD=26.96;ReadPosRankSum=0.764;VQSLOD=1.9032;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:4:6.88:0,7,63	0/0:7,0:7:21.07:0,21,390	0/0:6,0:3:8.88:0,9,92	0/0:5,0:2:5.49:0,5,35	0/0:12,0:12:35.21:0,35,507	0/0:5,0:4:11.97:0,12,275	0/0:11,0:11:29.89:0,30,432	./.	0/0:4,0:4:11.69:0,12,203	0/0:11,0:11:33.07:0,33,712	0/0:8,0:8:24.04:0,24,517	0/0:6,0:6:15.04:0,15,284	0/0:8,0:8:23.95:0,24,330	0/0:7,0:7:21.05:0,21,330	0/0:9,0:9:23.98:0,24,430	0/0:8,0:8:22.88:0,23,396	1/1:7,2:9:10.06:325,10,0	0/1:8,2:9:0.79:284,0,1	0/0:6,0:4:10.27:0,10,156	0/0:11,0:11:33.08:0,33,548	0/0:4,0:4:12.04:0,12,216	0/0:2,0:2:6.02:0,6,150	0/0:6,0:6:15.03:0,15,280	0/0:8,0:8:16.36:0,16,312	0/0:8,0:8:24.07:0,24,481	0/0:7,0:7:21:0,21,289	0/0:7,0:7:18.89:0,19,275	0/0:6,0:6:11.70:0,12,96
chr10	28868418	.	C	CT	2467.59	PASS	AB=0.851;AC=42;AF=0.750;AN=56;BaseQRankSum=1.759;DP=417;FS=19.164;HRun=16;HaplotypeScore=116.1405;InbreedingCoeff=0.0257;MQ=71.88;MQ0=15;MQRankSum=-5.592;QD=6.28;ReadPosRankSum=-3.161;VQSLOD=0.1839;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:23,6:27:8.22:185,8,0	0/0:4,0:4:2.58:0,3,11	0/1:30,0:19:11.06:14,0,11	0/0:19,0:14:10.31:0,10,47	0/1:13,1:13:19.20:53,0,19	1/1:13,5:19:18.90:207,19,0	1/1:17,5:23:4.90:195,5,0	0/1:13,4:17:12.60:83,0,13	1/1:10,2:12:10.13:90,10,0	1/1:14,1:14:15.04:108,15,0	1/1:10,3:12:6.07:110,6,0	0/1:9,1:9:12.92:62,0,13	1/1:12,1:14:19.53:144,20,0	1/1:10,2:12:3.14:98,3,0	0/1:13,2:15:1.07:66,0,1	1/1:8,2:9:1.29:93,1,0	0/1:8,0:17:11.31:79,0,11	1/1:10,0:11:11.36:56,11,0	0/1:10,2:11:12.07:87,0,12	1/1:11,1:13:12.66:76,13,0	0/1:8,1:11:5.99:6,0,17	1/1:4,0:4:8.84:56,9,0	0/1:3,0:3:0:0,0,0	1/1:8,10:15:14.87:119,15,0	1/1:11,2:13:2.71:86,3,0	1/1:10,3:13:33.60:238,34,0	1/1:23,2:25:36.87:256,37,0	0/1:5,2:6:5.02:44,0,5
chr10	28868728	.	CATATATATATATATATATATATATATATATATAT	C	776	PASS	AC=4;AF=0.200;AN=20;BaseQRankSum=2.221;DP=95;FS=2.058;HRun=0;HaplotypeScore=98.8527;InbreedingCoeff=0.4008;MQ=75.01;MQ0=1;MQRankSum=-1.654;QD=23.52;ReadPosRankSum=2.504;VQSLOD=1.6906;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:5:3.01:0,3,96	./.	./.	0/0:12,0:7:9.50:0,10,62	./.	./.	./.	0/0:11,0:10:9.03:0,9,468	./.	0/0:4,0:4:6.01:0,6,78	./.	./.	0/0:5,0:5:3:0,3,25	./.	./.	./.	1/1:13,0:13:3.01:80,3,0	1/1:13,7:20:9.03:782,9,0	./.	./.	0/0:2,0:2:3.01:0,3,163	./.	./.	0/0:2,0:2:3.01:0,3,255	0/0:4,0:4:6:0,6,100	./.	./.	./.
chr10	28868926	.	TA	T	457.53	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=3.207;DP=259;FS=15.168;HRun=5;HaplotypeScore=35.2408;InbreedingCoeff=0.7330;MQ=72.17;MQ0=2;MQRankSum=-0.349;QD=19.06;ReadPosRankSum=2.885;VQSLOD=1.8481;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:21:54.10:0,54,699	0/0:3,0:3:6.02:0,6,81	0/0:21,0:8:13.45:0,13,123	0/0:15,0:8:14.53:0,15,137	0/0:12,0:12:36.01:0,36,392	0/0:10,0:10:30.06:0,30,388	0/0:12,0:12:33.06:0,33,415	0/0:38,0:38:99:0,102,1357	0/0:3,0:3:9.03:0,9,122	0/0:7,0:7:18.06:0,18,244	0/0:7,0:7:21.04:0,21,255	0/0:3,0:3:9.03:0,9,122	0/0:3,0:3:8.99:0,9,102	0/0:6,0:6:17.95:0,18,220	0/0:5,0:5:11.97:0,12,140	0/0:5,0:5:9.03:0,9,123	1/1:1,13:14:27.08:305,27,0	1/1:1,9:10:24.07:272,24,0	0/0:8,0:8:24.02:0,24,276	0/0:7,0:7:21.06:0,21,270	0/0:6,0:6:18.06:0,18,246	0/0:5,0:5:12.04:0,12,164	0/0:7,0:7:21.07:0,21,285	0/0:13,0:12:33.02:0,33,420	0/0:3,0:3:9.03:0,9,123	0/0:5,0:5:15.05:0,15,205	0/0:2,0:2:6.01:0,6,69	0/0:7,0:7:21.02:0,21,265
chr10	28869008	.	GCA	G	87.66	PASS	AB=0.860;AC=11;AF=0.204;AN=54;BaseQRankSum=-0.999;DP=411;FS=16.391;HRun=0;HaplotypeScore=80.6720;InbreedingCoeff=-0.1232;MQ=54.04;MQ0=16;MQRankSum=-5.693;QD=0.83;ReadPosRankSum=-2.297;VQSLOD=0.1475;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,3:30:39.61:0,40,616	1/1:1,0:1:3:26,3,0	0/0:45,0:13:26.93:0,27,572	0/0:36,0:19:37.87:0,38,702	0/0:8,0:8:6.02:0,6,95	0/0:19,3:21:41.87:0,42,453	0/0:22,0:21:44.64:0,45,562	0/0:25,0:25:65.41:0,65,823	0/1:6,1:7:30.10:30,0,157	0/1:17,3:18:28.28:28,0,398	0/0:4,1:5:12.03:0,12,172	0/0:9,1:10:20.74:0,21,229	0/1:10,2:12:12.88:13,0,156	0/0:16,2:18:9.52:0,10,408	0/0:13,1:14:30:0,30,348	0/1:17,1:17:31.49:31,0,254	0/0:17,0:16:38.95:0,39,481	./.	0/1:11,2:11:14.12:14,0,375	0/1:2,2:4:28.98:29,0,68	0/0:16,0:16:36.34:0,36,505	0/0:6,1:7:3.01:0,3,50	0/0:3,2:4:6.02:0,6,99	0/0:12,2:13:6.02:0,6,99	0/0:6,0:4:3.01:0,3,49	0/1:11,2:13:38.83:39,0,285	0/1:8,1:9:12.54:13,0,235	0/1:7,1:8:0.54:1,0,131
chr10	28869303	.	G	GATTT	2053.52	PASS	AC=4;AF=0.080;AN=50;BaseQRankSum=7.746;DP=415;FS=0.000;HRun=0;HaplotypeScore=63.2642;InbreedingCoeff=0.8363;MQ=63.70;MQ0=7;MQRankSum=1.722;QD=43.69;ReadPosRankSum=1.758;VQSLOD=3.4160;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:23:42.14:0,42,693	0/0:7,0:7:15.05:0,15,253	./.	0/0:8,0:3:3.01:0,3,51	0/0:12,0:12:18.06:0,18,305	0/0:27,0:26:69.24:0,69,1171	0/0:9,0:9:15.04:0,15,228	0/0:41,0:36:63.16:0,63,1009	0/0:14,0:14:30.10:0,30,509	0/0:11,0:11:21.07:0,21,355	0/0:6,0:6:15.05:0,15,240	0/0:10,0:10:15.05:0,15,255	0/0:15,0:15:33.11:0,33,560	0/0:5,0:5:9.02:0,9,126	0/0:13,0:13:36.12:0,36,606	0/0:8,0:8:15.05:0,15,255	1/1:5,23:27:54.19:1349,54,0	1/1:4,15:18:33.11:824,33,0	0/0:31,0:31:56.97:0,57,898	0/0:16,0:16:33.11:0,33,550	./.	./.	0/0:6,0:6:12.04:0,12,203	0/0:12,0:12:18.06:0,18,305	0/0:16,0:16:39.13:0,39,645	0/0:18,0:18:42.14:0,42,708	0/0:26,0:26:60.20:0,60,993	0/0:18,0:18:45.15:0,45,763
chr10	28871285	.	AT	A	13001.01	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-4.403;DP=577;FS=0.991;HRun=9;HaplotypeScore=63.8802;InbreedingCoeff=0.9888;MQ=77.88;MQ0=0;MQRankSum=-6.581;QD=23.55;ReadPosRankSum=4.463;VQSLOD=5.5001;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,32:35:96.05:879,96,0	1/1:1,7:8:21.01:192,21,0	0/0:9,0:9:15.60:0,16,179	0/0:16,0:16:26.97:0,27,266	1/1:6,9:15:33.01:302,33,0	1/1:2,15:17:44.71:412,45,0	1/1:1,18:19:45.02:412,45,0	1/1:5,26:31:78.03:713,78,0	1/1:2,17:19:57.03:522,57,0	1/1:1,18:19:50.99:463,51,0	1/1:3,18:21:48.01:439,48,0	1/1:0,17:17:51.03:467,51,0	1/1:2,22:24:69.04:632,69,0	1/1:0,21:21:60.03:549,60,0	1/1:1,25:26:66.03:604,66,0	1/1:1,20:21:60.03:549,60,0	1/1:0,20:20:60.03:549,60,0	1/1:2,13:15:39.02:357,39,0	1/1:2,21:23:63:567,63,0	1/1:2,23:25:68.98:621,69,0	1/1:2,16:18:45.02:412,45,0	1/1:3,21:24:63.03:576,63,0	1/1:6,24:30:60.02:549,60,0	1/1:2,18:20:48.02:439,48,0	1/1:1,14:15:36.02:330,36,0	1/1:3,20:23:57.01:522,57,0	1/1:8,24:32:80.98:726,81,0	1/1:3,11:14:24.01:220,24,0
chr10	28871381	.	C	CCA	28863.75	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-13.372;DP=682;FS=6.196;HRun=0;HaplotypeScore=79.0652;InbreedingCoeff=0.9996;MQ=83.18;MQ0=1;MQRankSum=-6.311;QD=49.34;ReadPosRankSum=2.515;VQSLOD=5.3829;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,47:48:99:2529,135,0	1/1:0,9:9:27.09:506,27,0	0/0:22,0:22:60.08:0,60,816	0/0:19,0:19:48.16:0,48,669	1/1:2,25:28:75.26:1382,75,0	1/1:1,21:23:47.83:899,48,0	1/1:3,22:25:60.21:1124,60,0	1/1:1,30:31:90.31:1656,90,0	1/1:0,27:27:75.26:1405,75,0	1/1:3,26:30:81.24:1451,81,0	1/1:1,18:19:48.16:871,48,0	1/1:1,24:25:63.22:1180,63,0	1/1:0,20:20:48.16:899,48,0	1/1:3,20:23:66.23:1236,66,0	1/1:5,22:26:72.25:1342,72,0	1/1:1,24:25:69.24:1293,69,0	0/0:30,0:30:87.29:0,87,1278	0/0:26,0:26:69.23:0,69,1010	1/1:6,10:16:39.13:731,39,0	1/1:0,22:23:63.22:1180,63,0	1/1:1,31:33:84.29:1573,84,0	1/1:5,16:21:54.19:1011,54,0	1/1:4,21:25:69.24:1276,69,0	1/1:1,28:29:75.26:1405,75,0	1/1:3,11:14:39.11:690,39,0	1/1:0,20:21:63.21:1150,63,0	1/1:1,26:27:75.12:1403,75,0	1/1:0,14:15:36.12:674,36,0
chr10	28871931	.	T	TGGGGGA	28589.85	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-8.278;DP=581;FS=15.038;HRun=0;HaplotypeScore=109.1070;InbreedingCoeff=0.7089;MQ=63.02;MQ0=3;MQRankSum=-7.772;QD=56.61;ReadPosRankSum=3.013;VQSLOD=4.1613;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,17:26:27.87:976,28,0	1/1:3,4:7:5.83:197,6,0	0/0:36,0:32:1.23:0,1,650	0/0:38,0:26:46.51:0,47,815	1/1:0,15:17:33.02:864,33,0	1/1:3,11:14:27.09:861,27,0	1/1:4,14:18:10.54:728,11,0	1/1:14,23:38:78.08:1942,78,0	1/1:2,20:22:45.15:1534,45,0	1/1:3,12:15:33.11:1062,33,0	1/1:3,16:20:42.10:1316,42,0	1/1:3,19:23:48.16:1587,48,0	1/1:2,18:23:45.15:1534,45,0	1/1:2,10:12:27.09:875,27,0	1/1:4,15:22:36.12:1207,36,0	1/1:2,27:31:72.25:2393,72,0	1/1:8,10:20:15.05:486,15,0	1/1:6,4:12:15.05:414,15,0	1/1:2,14:17:48.15:1427,48,0	1/1:6,15:23:42.10:1258,42,0	1/1:4,9:15:18.06:616,18,0	1/1:4,11:17:33.11:1111,33,0	1/1:6,5:12:12.04:411,12,0	1/1:4,15:21:4.17:718,4,0	1/1:4,14:19:39.13:1276,39,0	1/1:6,14:20:39.60:1212,40,0	1/1:4,21:27:63.22:2068,63,0	1/1:4,6:12:17.65:516,18,0
chr10	28873121	.	AT	A	12056.18	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=4.692;DP=444;FS=21.297;HRun=4;HaplotypeScore=69.8111;InbreedingCoeff=0.9938;MQ=72.87;MQ0=0;MQRankSum=-6.513;QD=32.41;ReadPosRankSum=4.801;VQSLOD=3.0137;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,23:24:69.21:828,69,0	1/1:1,6:7:15.05:180,15,0	0/0:18,0:18:54.18:0,54,740	0/0:13,0:13:36.09:0,36,481	1/1:1,16:17:42.11:492,42,0	1/1:0,12:12:33.10:394,33,0	1/1:2,11:13:33.10:396,33,0	1/1:1,26:25:69.21:828,69,0	1/1:2,13:15:39.12:468,39,0	1/1:2,14:17:48.12:558,48,0	1/1:0,18:18:54.17:648,54,0	1/1:0,12:12:36.11:432,36,0	1/1:0,10:10:30.09:361,30,0	1/1:2,18:20:48.15:576,48,0	1/1:0,19:19:51.16:612,51,0	1/1:2,11:13:36.11:432,36,0	0/0:23,0:22:69.20:0,69,939	0/0:18,0:18:54.18:0,54,756	1/1:1,10:11:33.09:387,33,0	1/1:0,13:13:36.11:432,36,0	1/1:1,21:22:50.46:611,50,0	1/1:0,10:10:30.09:360,30,0	1/1:1,15:16:45.14:540,45,0	1/1:0,19:19:45.14:540,45,0	1/1:0,19:19:51.16:612,51,0	1/1:0,14:14:42.13:505,42,0	1/1:1,16:17:51.16:613,51,0	1/1:0,7:7:21.06:252,21,0
chr10	28873185	.	T	TTA	7839.43	PASS	AC=44;AF=0.880;AN=50;BaseQRankSum=0.039;DP=220;FS=0.000;HRun=0;HaplotypeScore=53.6030;InbreedingCoeff=0.6739;MQ=52.57;MQ0=0;MQRankSum=-2.120;QD=40.00;ReadPosRankSum=-1.559;VQSLOD=5.9944;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,4:10:24.07:382,24,0	./.	0/0:4,0:4:0.18:0,0,39	./.	1/1:5,7:12:27:408,27,0	1/1:1,11:12:36.11:620,36,0	1/1:2,2:3:9.03:146,9,0	1/1:11,10:20:60.20:1034,60,0	./.	1/1:6,5:11:24.08:437,24,0	1/1:6,7:13:27.09:432,27,0	1/1:0,3:3:9.03:163,9,0	1/1:1,8:9:27.09:478,27,0	1/1:4,4:8:15.05:272,15,0	1/1:2,4:5:12.03:187,12,0	1/1:4,2:6:9.03:164,9,0	0/0:9,0:9:27.05:0,27,360	0/0:10,0:10:27.05:0,27,360	1/1:9,6:14:33.08:514,33,0	1/1:2,3:5:15.05:254,15,0	1/1:1,1:2:6.02:108,6,0	1/1:4,1:5:3.01:54,3,0	1/1:4,3:7:18.03:249,18,0	1/1:1,1:2:3.01:54,3,0	1/1:1,14:15:45.15:799,45,0	1/1:6,3:9:21.07:367,21,0	1/1:5,7:12:10.08:390,10,0	1/1:3,6:9:18.06:328,18,0
chr10	28873230	.	ATT	A	3715.85	PASS	AB=0.760;AC=45;AF=0.804;AN=56;BaseQRankSum=-3.545;DP=219;FS=1.422;HRun=6;HaplotypeScore=44.0739;InbreedingCoeff=0.1038;MQ=48.74;MQ0=13;MQRankSum=2.885;QD=17.78;ReadPosRankSum=1.634;VQSLOD=-0.1600;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,3:9:15.34:160,15,0	1/1:0,1:1:3.01:40,3,0	0/0:5,0:4:9.03:0,9,128	0/0:5,0:3:6.02:0,6,91	1/1:5,2:7:16.35:201,16,0	1/1:9,2:9:8.20:90,8,0	1/1:2,2:3:3.62:76,4,0	1/1:12,22:30:54.16:713,54,0	0/1:1,5:6:4.88:145,0,5	1/1:5,2:7:6.96:82,7,0	0/1:5,3:7:5.15:70,0,5	0/1:3,1:4:18.34:18,0,28	1/1:11,0:10:7.40:54,7,0	1/1:3,3:6:15.52:199,16,0	1/1:2,4:5:15.05:199,15,0	0/1:1,1:2:28.05:34,0,28	0/1:8,0:3:12.37:18,0,12	0/1:10,0:8:22.73:23,0,46	0/1:3,8:10:1.71:230,0,2	1/1:2,3:5:11.83:133,12,0	1/1:0,4:4:9.03:120,9,0	1/1:0,9:9:23.99:291,24,0	1/1:0,3:3:5.93:57,6,0	1/1:0,2:2:6.02:80,6,0	1/1:10,4:14:15.46:168,15,0	1/1:3,2:5:9.02:107,9,0	1/1:3,8:10:23.20:288,23,0	1/1:4,5:6:10.44:123,10,0
chr10	28873232	.	T	TTA	6340.29	PASS	AB=1.000;AC=49;AF=0.875;AN=56;BaseQRankSum=-1.140;DP=229;FS=1.342;HRun=0;HaplotypeScore=38.0046;InbreedingCoeff=0.3458;MQ=49.26;MQ0=13;MQRankSum=0.702;QD=29.22;ReadPosRankSum=0.378;VQSLOD=5.6897;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,4:10:18.53:302,19,0	1/1:1,0:1:3.01:40,3,0	0/0:6,0:5:9.03:0,9,128	0/0:6,0:4:6.02:0,6,91	1/1:5,3:8:21.07:335,21,0	1/1:6,6:10:24.07:378,24,0	1/1:2,2:3:9.03:131,9,0	1/1:31,0:27:78.26:1090,78,0	0/1:6,0:6:4.89:145,0,5	1/1:5,2:7:15.03:216,15,0	1/1:5,3:7:15.05:235,15,0	1/1:6,0:6:11.94:119,12,0	1/1:0,11:10:15.05:278,15,0	1/1:5,1:6:18.06:254,18,0	1/1:5,1:5:15.05:199,15,0	1/1:2,0:2:5.93:57,6,0	0/1:8,0:3:12.89:13,0,35	0/1:11,0:9:14.76:15,0,87	1/1:11,1:11:27.01:357,27,0	1/1:4,1:5:12.04:175,12,0	1/1:5,0:5:9.03:120,9,0	1/1:9,0:9:23.99:291,24,0	1/1:3,0:3:5.93:57,6,0	1/1:3,0:3:6.02:80,6,0	1/1:8,7:15:42.08:600,42,0	1/1:6,0:6:12.02:133,12,0	1/1:8,1:10:30.10:435,30,0	1/1:7,2:6:18.06:287,18,0
chr10	28874109	.	A	AGTGTGTGT	420.27	PASS	AB=1.000;AC=11;AF=0.204;AN=54;BaseQRankSum=-1.121;DP=640;FS=6.852;HRun=0;HaplotypeScore=164.7691;InbreedingCoeff=0.2858;MQ=65.08;MQ0=12;MQRankSum=-2.197;QD=2.52;ReadPosRankSum=-3.000;VQSLOD=1.6461;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:11.88:0,12,90	0/1:9,0:9:4.54:5,0,61	0/1:34,0:24:0:0,0,0	./.	0/0:19,0:16:3.94:0,4,29	0/0:20,0:20:8.98:0,9,75	0/0:23,0:22:14.08:0,14,200	1/1:32,0:32:6.96:32,7,0	0/0:27,0:26:21.70:0,22,223	0/1:18,0:18:21.42:21,0,67	0/0:9,0:9:3:0,3,27	0/0:30,0:30:35.41:0,35,337	0/0:22,0:22:11.62:0,12,163	0/0:22,0:22:30.03:0,30,352	0/0:28,0:28:26.93:0,27,272	0/0:25,0:25:27.38:0,27,380	1/1:10,3:15:3.01:122,3,0	1/1:20,0:20:16.25:361,16,0	0/0:29,0:27:1.64:0,2,19	0/0:15,0:15:8.97:0,9,74	0/0:29,0:29:12:0,12,151	0/0:20,0:20:2.33:0,2,48	0/0:8,0:8:5.90:0,6,43	0/0:51,0:51:0.41:0,0,418	0/0:14,0:14:14.86:0,15,172	0/0:22,0:21:6.79:0,7,79	0/1:19,0:19:7.31:7,0,151	0/1:19,0:18:3.45:3,0,65
chr10	28874112	.	G	GTA	8142.15	PASS	AB=0.560;AC=42;AF=0.750;AN=56;BaseQRankSum=-8.261;DP=686;FS=2.778;HRun=0;HaplotypeScore=102.7864;InbreedingCoeff=0.3056;MQ=62.84;MQ0=15;MQRankSum=-0.333;QD=13.94;ReadPosRankSum=3.325;VQSLOD=4.4881;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:4,24:30:2.94:215,0,3	1/1:0,8:8:12.04:227,12,0	0/0:33,0:21:59.83:0,60,590	0/0:33,0:22:54.81:0,55,572	1/1:2,17:16:2.63:57,3,0	0/1:2,18:21:16.95:158,0,17	1/1:7,17:24:22.44:435,22,0	1/1:31,0:31:82.78:692,83,0	1/1:5,24:29:25.09:595,25,0	1/1:5,16:22:29.01:435,29,0	1/1:1,12:15:3.01:58,3,0	1/1:5,26:31:9.07:593,9,0	1/1:3,19:22:26.92:452,27,0	1/1:5,19:24:4.78:434,5,0	1/1:2,26:28:18.50:448,19,0	0/1:6,18:24:16.87:316,0,17	0/0:16,0:15:6.08:0,6,148	0/0:20,0:20:29.29:0,29,273	1/1:29,0:28:60.67:491,61,0	1/1:2,14:19:9.03:171,9,0	0/1:7,23:30:24.34:155,0,24	1/1:3,19:24:1.06:159,1,0	1/1:1,8:9:6.02:115,6,0	0/1:11,45:57:15.40:535,0,15	0/1:6,11:17:66.23:203,0,66	1/1:6,20:28:39.03:480,39,0	1/1:1,19:20:27.09:512,27,0	1/1:3,15:18:12.04:208,12,0
chr10	28875042	.	C	CCCAA	16703.10	PASS	AB=1.000;AC=51;AF=0.911;AN=56;BaseQRankSum=-6.014;DP=762;FS=3.685;HRun=0;HaplotypeScore=105.8222;InbreedingCoeff=0.6800;MQ=62.87;MQ0=9;MQRankSum=0.213;QD=24.42;ReadPosRankSum=3.758;VQSLOD=4.3714;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,30:38:12.04:292,12,0	1/1:10,4:14:30.10:725,30,0	0/0:35,0:25:18.05:0,18,379	0/0:42,0:27:38.07:0,38,716	1/1:2,12:15:39:746,39,0	1/1:4,15:20:9.03:225,9,0	1/1:8,23:28:6.02:146,6,0	1/1:12,22:34:63.17:1231,63,0	1/1:3,26:30:33.11:823,33,0	1/1:5,26:32:72.20:1612,72,0	1/1:5,20:25:39.05:821,39,0	1/1:12,21:33:14.66:425,15,0	1/1:5,12:17:21.07:524,21,0	1/1:7,23:30:33.11:786,33,0	1/1:8,32:40:15.05:374,15,0	1/1:4,22:27:12.04:299,12,0	0/1:12,0:11:7.94:8,0,13	1/1:15,0:12:9.02:94,9,0	1/1:11,3:13:21.07:475,21,0	1/1:6,15:21:36.12:828,36,0	1/1:11,29:41:9:480,9,0	1/1:21,4:25:69.22:1490,69,0	1/1:7,17:24:15.02:355,15,0	1/1:3,32:38:33.11:801,33,0	1/1:5,14:20:18.06:419,18,0	1/1:7,32:40:90.15:1978,90,0	1/1:9,19:27:18.06:449,18,0	1/1:2,10:12:12.04:299,12,0
chr10	28875055	.	CCAGTCAGT	C	627.48	PASS	AB=0.959;AC=11;AF=0.196;AN=56;BaseQRankSum=-2.131;DP=738;FS=3.258;HRun=0;HaplotypeScore=195.9701;InbreedingCoeff=-0.0512;MQ=55.78;MQ0=31;MQRankSum=-0.141;QD=2.52;ReadPosRankSum=-4.663;VQSLOD=1.4775;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:37,0:36:58.12:58,0,328	0/1:11,0:11:18.95:19,0,537	0/0:32,0:12:17.46:0,17,591	0/0:41,0:20:37.92:0,38,1173	0/0:19,0:19:14.94:0,15,977	0/0:20,0:19:12.04:0,12,446	0/0:32,0:29:17.59:0,18,556	0/1:31,0:26:70.61:71,0,454	0/0:32,0:32:46.71:0,47,1431	0/0:32,0:32:73.06:0,73,1080	0/1:25,0:25:18.69:19,0,495	0/1:27,0:26:26.01:26,0,476	0/0:21,0:19:31.46:0,31,996	0/0:32,0:32:36.40:0,36,1432	0/0:34,0:34:21.07:0,21,704	0/0:30,0:30:20.90:0,21,585	1/1:2,7:8:6.02:159,6,0	0/1:8,11:17:46.36:342,0,46	0/0:13,0:10:19.31:0,19,520	0/1:21,0:20:5.04:5,0,809	0/0:40,0:39:29.45:0,29,1237	0/1:29,0:29:63.66:64,0,1162	0/0:21,0:21:18.91:0,19,490	0/0:40,0:39:37.08:0,37,1292	0/0:19,0:19:23.82:0,24,630	0/1:40,0:40:11.21:11,0,1714	0/0:22,0:21:23.53:0,24,796	0/0:9,0:9:12.04:0,12,415
chr10	28875160	.	CAACT	C	193.51	PASS	AB=0.984;AC=6;AF=0.107;AN=56;BaseQRankSum=1.016;DP=398;FS=4.517;HRun=0;HaplotypeScore=138.4359;InbreedingCoeff=0.5613;MQ=37.00;MQ0=28;MQRankSum=-3.267;QD=2.80;ReadPosRankSum=0.418;VQSLOD=2.3655;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,1:18:32.41:0,32,219	0/0:9,0:9:14.58:0,15,83	0/0:17,0:6:17.07:0,17,160	0/0:22,0:10:29.87:0,30,243	0/0:13,0:13:31.20:0,31,180	0/0:7,0:6:17.70:0,18,112	0/0:13,0:11:26.43:0,26,191	0/0:25,0:20:40.01:0,40,486	0/0:14,0:12:32.48:0,32,212	0/0:14,0:13:29.67:0,30,216	0/0:10,0:9:10.80:0,11,128	0/0:10,0:10:29.07:0,29,176	0/0:10,0:8:19.07:0,19,102	0/0:7,0:7:14.48:0,14,88	0/0:23,0:21:22.10:0,22,236	0/0:13,0:11:23.64:0,24,158	1/1:8,2:8:18.81:213,19,0	1/1:6,2:5:7.79:75,8,0	0/0:30,0:18:48.24:0,48,405	0/0:7,0:7:14.78:0,15,97	0/1:29,1:24:25.02:25,0,126	0/0:12,0:11:22.73:0,23,142	0/0:10,0:9:8.39:0,8,52	0/1:21,0:18:3.52:4,0,132	0/0:8,0:7:14.78:0,15,98	0/0:19,0:18:46.57:0,47,323	0/0:13,0:12:23.42:0,23,150	0/0:3,0:3:8.89:0,9,61
chr10	28875187	.	TCAACCAACCAAC	T	17303.01	PASS	AB=0.820;AC=47;AF=0.839;AN=56;BaseQRankSum=1.617;DP=460;FS=0.000;HRun=0;HaplotypeScore=169.8897;InbreedingCoeff=0.5125;MQ=40.35;MQ0=11;MQRankSum=2.995;QD=42.62;ReadPosRankSum=3.978;VQSLOD=4.3562;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:15,4:18:18.64:316,19,0	1/1:2,8:10:14.97:415,15,0	0/0:28,0:12:20.97:0,21,385	0/0:23,0:13:16.32:0,16,226	1/1:2,20:21:47.29:890,47,0	1/1:8,3:10:26.97:625,27,0	1/1:9,5:14:35.87:616,36,0	0/1:21,0:21:23.07:443,0,23	1/1:9,8:16:47.86:1246,48,0	1/1:3,13:15:32.87:809,33,0	1/1:8,3:11:23.84:439,24,0	1/1:7,10:17:47.30:1229,47,0	1/1:8,5:12:32.82:707,33,0	1/1:3,7:10:29.88:755,30,0	1/1:5,26:29:35.19:1472,35,0	1/1:7,6:12:29.06:813,29,0	0/0:3,0:3:2.97:0,3,20	1/1:2,0:2:2.68:11,3,0	0/1:14,17:26:99:1042,0,107	1/1:3,6:7:11.99:311,12,0	0/1:27,8:31:3.62:574,0,4	1/1:1,21:22:50.51:958,51,0	1/1:3,15:17:11.80:246,12,0	1/1:9,4:13:17.99:451,18,0	1/1:3,5:8:21:548,21,0	1/1:15,8:22:25.08:1171,25,0	1/1:1,14:14:26.67:957,27,0	1/1:2,3:5:9.03:258,9,0
chr10	28875208	.	C	CA	1394.41	PASS	AB=0.936;AC=23;AF=0.411;AN=56;BaseQRankSum=-5.213;DP=483;FS=4.721;HRun=2;HaplotypeScore=163.9001;InbreedingCoeff=-0.6136;MQ=43.19;MQ0=6;MQRankSum=-0.186;QD=3.70;ReadPosRankSum=-2.256;VQSLOD=-0.3969;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,1:24:19.44:0,19,542	0/1:8,0:8:43.19:45,0,43	0/0:23,0:9:24.02:0,24,272	0/0:22,0:12:17.23:0,17,247	0/1:21,0:21:98.20:98,0,183	0/1:12,2:13:99:103,0,141	0/1:13,2:15:99:128,0,219	0/1:17,2:19:99:134,0,295	0/1:24,3:24:17.88:18,0,488	0/1:16,0:15:99:128,0,155	0/1:11,2:13:85.97:86,0,155	0/1:21,2:23:20.09:20,0,489	0/1:15,1:16:50.89:51,0,274	0/1:12,1:13:5.21:5,0,260	0/1:33,0:31:32.93:33,0,268	0/1:18,3:19:37.63:38,0,346	0/0:3,0:3:6.02:0,6,68	1/1:2,0:2:0.47:1,0,0	0/1:24,0:22:99:121,0,280	0/1:9,0:7:11.73:34,0,12	0/1:26,6:27:99:131,0,469	0/1:21,0:21:99:102,0,240	0/0:18,0:18:15.75:0,16,113	0/1:9,2:11:59.42:59,0,150	0/1:10,0:10:58.81:59,0,168	0/1:17,3:20:99:117,0,282	0/0:16,0:15:0.22:0,0,77	0/1:9,0:9:34.02:34,0,37
chr10	28875256	.	TCAACTAACCAAC	T	9014.33	PASS	AB=0.997;AC=28;AF=0.500;AN=56;BaseQRankSum=-3.600;DP=659;FS=3.272;HRun=0;HaplotypeScore=297.4814;InbreedingCoeff=-0.5626;MQ=38.29;MQ0=17;MQRankSum=-3.400;QD=15.25;ReadPosRankSum=-10.403;VQSLOD=0.9821;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:37,0:35:99:460,0,169	0/1:8,0:8:99:151,0,103	0/0:37,0:20:37.30:0,37,363	0/0:26,0:15:32.14:0,32,336	0/1:21,0:21:80.55:225,0,81	1/1:17,0:16:13.84:197,14,0	0/1:19,0:17:99:164,0,188	1/1:2,21:20:55.99:529,56,0	0/1:38,0:35:99:616,0,356	0/1:31,0:30:99:478,0,152	0/1:15,0:15:45.94:336,0,46	0/1:33,0:31:99:783,0,279	0/1:23,1:23:99:517,0,111	0/1:30,0:30:99:543,0,362	0/1:38,0:37:99:393,0,323	0/1:30,0:28:99:450,0,346	0/0:5,0:5:10.74:0,11,158	0/1:10,0:7:4.36:4,0,75	0/1:23,0:18:99:258,0,118	0/1:16,0:16:99:227,0,132	0/1:29,1:26:99:221,0,296	0/1:29,0:29:59.30:331,0,59	0/1:10,0:9:10:10,0,59	0/1:24,0:22:82.68:533,0,83	0/1:14,0:14:99:279,0,198	0/1:37,0:35:99:852,0,196	0/1:21,0:20:99:323,0,256	1/1:13,0:13:8.98:134,9,0
chr10	28875268	.	C	CCAATCAAT	22766.10	PASS	AB=1.000;AC=48;AF=0.857;AN=56;BaseQRankSum=-0.675;DP=664;FS=14.133;HRun=0;HaplotypeScore=183.4807;InbreedingCoeff=0.6278;MQ=38.88;MQ0=39;MQRankSum=-1.347;QD=37.94;ReadPosRankSum=3.931;VQSLOD=3.7860;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:34,2:34:56.50:1052,56,0	1/1:7,0:7:15.04:288,15,0	0/0:27,0:10:20.17:0,20,352	0/0:25,0:8:18.05:0,18,287	0/1:19,0:19:48:441,0,48	1/1:2,13:16:12.04:504,12,0	1/1:21,0:15:30.07:456,30,0	1/1:26,0:20:27.25:362,27,0	1/1:31,7:34:33.93:1896,34,0	1/1:28,2:28:20.04:1139,20,0	1/1:12,1:13:33.07:531,33,0	1/1:31,4:33:56.90:1668,57,0	1/1:20,7:27:72.12:1658,72,0	1/1:24,5:29:75.23:1837,75,0	1/1:30,7:35:69.13:1594,69,0	1/1:21,8:27:75.11:1684,75,0	0/0:12,0:12:20.80:0,21,323	0/1:12,0:9:34.73:35,0,117	1/1:27,1:16:14.33:556,14,0	1/1:11,3:14:19.75:576,20,0	1/1:28,0:25:8.62:573,9,0	1/1:24,1:25:28.08:794,28,0	1/1:11,0:10:6.02:141,6,0	1/1:23,2:23:9.13:842,9,0	1/1:13,3:16:39.06:967,39,0	1/1:36,4:37:87.09:1885,87,0	1/1:20,2:21:45.09:993,45,0	1/1:2,12:13:9.03:296,9,0
chr10	28875664	.	ACAGCAGCAG	A	1020.50	PASS	AC=16;AF=0.800;AN=20;BaseQRankSum=-1.857;DP=463;FS=0.000;HRun=0;HaplotypeScore=112.2338;InbreedingCoeff=0.3469;MQ=69.60;MQ0=26;MQRankSum=-1.617;QD=4.70;ReadPosRankSum=1.258;VQSLOD=1.6531;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	0/0:5,0:4:0:0,0,0	./.	./.	./.	./.	1/1:34,0:32:8.97:94,9,0	./.	0/0:11,0:17:4.40:0,4,60	./.	./.	1/1:19,11:30:9.03:238,9,0	1/1:16,0:16:3.01:80,3,0	1/1:21,10:30:5.65:100,6,0	1/1:12,4:16:2.66:80,3,0	1/1:15,8:23:11.93:257,12,0	./.	./.	./.	./.	./.	./.	./.	1/1:26,12:38:3.01:75,3,0	./.	./.	1/1:15,14:29:8.99:180,9,0	./.
chr10	28876988	.	G	GA	780.69	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=0.181;DP=558;FS=1.783;HRun=6;HaplotypeScore=55.8275;InbreedingCoeff=0.9822;MQ=83.25;MQ0=0;MQRankSum=-1.420;QD=26.02;ReadPosRankSum=0.227;VQSLOD=3.6322;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:84.14:0,84,840	0/0:11,0:11:27.04:0,27,268	0/0:20,0:20:44.88:0,45,439	0/0:12,0:12:24:0,24,245	0/0:25,0:25:66.13:0,66,663	0/0:17,0:17:42.09:0,42,428	0/0:18,0:18:45.06:0,45,445	0/0:25,0:25:60.13:0,60,611	0/0:20,0:20:51.11:0,51,520	0/0:23,0:23:60.13:0,60,608	0/0:23,0:23:54.12:0,54,550	0/0:20,0:20:39.09:0,39,398	0/0:25,0:25:63.12:0,63,634	0/0:16,0:16:33.07:0,33,337	0/0:26,0:26:69.15:0,69,704	0/0:18,0:18:51.12:0,51,520	1/1:1,15:16:42.13:525,42,0	1/1:3,11:14:30.10:377,30,0	0/0:25,0:25:72.15:0,72,729	0/0:21,0:21:54.12:0,54,550	0/0:17,0:17:45.10:0,45,459	0/0:15,0:15:42.10:0,42,428	0/0:18,0:18:36.08:0,36,367	0/0:15,0:15:39.09:0,39,398	0/0:22,0:22:54.10:0,54,544	0/0:22,0:22:63.13:0,63,637	0/0:37,0:37:99:0,102,1033	0/0:4,0:4:12.03:0,12,122
chr10	28877190	.	G	GT	8373.45	PASS	AB=0.800;AC=48;AF=0.857;AN=56;BaseQRankSum=-9.421;DP=424;FS=7.242;HRun=10;HaplotypeScore=57.0793;InbreedingCoeff=0.6868;MQ=72.29;MQ0=1;MQRankSum=0.392;QD=22.33;ReadPosRankSum=0.407;VQSLOD=5.6874;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,13:15:30.08:320,30,0	0/1:3,6:9:3.58:171,0,4	0/0:15,0:10:10.69:0,11,64	0/1:14,0:9:16.12:16,0,25	1/1:6,24:30:73.18:709,73,0	1/1:1,12:13:8.45:295,8,0	1/1:2,1:4:11.83:95,12,0	1/1:6,23:29:69.10:697,69,0	1/1:1,12:13:27.07:288,27,0	1/1:5,10:16:35.91:357,36,0	1/1:4,11:15:10.75:283,11,0	1/1:2,11:15:35.71:354,36,0	1/1:0,13:13:33.08:351,33,0	1/1:1,10:11:27.07:288,27,0	1/1:1,11:12:27.07:288,27,0	1/1:3,12:15:11.45:327,11,0	0/0:2,0:14:27.12:0,27,81	0/0:1,0:20:36.66:0,37,106	1/1:5,18:23:49.94:539,50,0	1/1:3,12:15:33.04:340,33,0	1/1:1,9:10:24.06:256,24,0	1/1:1,4:5:11.95:113,12,0	1/1:2,16:18:39.57:416,40,0	1/1:1,10:11:30.08:320,30,0	1/1:2,20:22:51.13:544,51,0	1/1:5,8:14:29.91:302,30,0	1/1:2,20:22:42.11:447,42,0	1/1:2,9:11:25.62:260,26,0
chr10	28877281	.	AAC	A	2745.88	PASS	AB=0.866;AC=23;AF=0.411;AN=56;BaseQRankSum=9.629;DP=579;FS=6.129;HRun=0;HaplotypeScore=111.9437;InbreedingCoeff=-0.7242;MQ=55.12;MQ0=18;MQRankSum=-5.051;QD=6.34;ReadPosRankSum=-7.657;VQSLOD=0.0289;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:17,1:18:99:130,0,409	0/1:10,3:13:99:113,0,437	0/0:52,0:13:25.74:0,26,441	0/0:46,0:16:10.36:0,10,268	0/1:25,3:28:99:109,0,1005	0/1:12,9:21:99:278,0,453	0/1:10,4:14:46.75:47,0,425	0/0:29,0:29:87.23:0,87,1581	0/1:13,3:16:99:114,0,579	0/1:20,5:24:99:228,0,843	0/1:17,4:21:67.32:67,0,834	0/1:10,2:12:64.50:65,0,530	0/1:16,2:17:72.60:73,0,591	0/1:12,0:12:10.36:10,0,522	0/1:17,3:19:99:302,0,507	0/1:12,1:13:99:172,0,378	0/1:19,4:22:99:276,0,643	0/1:19,1:19:89.93:90,0,646	0/1:10,3:13:99:201,0,228	0/1:27,4:30:18.81:19,0,1340	0/1:5,2:7:99:158,0,149	0/0:14,1:15:1.38:0,1,753	0/1:17,1:18:45.48:45,0,478	0/1:10,4:14:99:134,0,246	0/1:20,4:23:99:190,0,733	0/1:18,1:19:33.83:34,0,759	0/1:29,4:33:46.13:46,0,1209	0/0:4,0:4:9.03:0,9,146
chr10	28877283	.	C	CAGAAGAAGAAGA	12405.91	PASS	AB=0.947;AC=51;AF=0.981;AN=52;BaseQRankSum=-1.732;DP=600;FS=0.000;HRun=0;HaplotypeScore=192.5200;InbreedingCoeff=0.0991;MQ=53.90;MQ0=20;MQRankSum=0.364;QD=24.47;ReadPosRankSum=-0.894;VQSLOD=3.8236;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:17,1:18:3.26:380,0,3	1/1:12,0:12:12.04:345,12,0	./.	./.	1/1:29,0:29:24.05:505,24,0	1/1:21,0:21:27.09:639,27,0	1/1:14,0:14:6.02:115,6,0	1/1:32,0:31:0.47:1,0,0	1/1:16,0:16:12.04:417,12,0	1/1:28,0:27:36.10:871,36,0	1/1:20,1:21:19.60:649,20,0	1/1:12,0:12:6.01:71,6,0	1/1:19,0:18:18.02:295,18,0	1/1:12,0:12:3.01:87,3,0	1/1:20,0:19:27.09:675,27,0	1/1:14,0:14:21.04:428,21,0	1/1:23,0:22:27.97:683,28,0	1/1:19,0:18:9.03:237,9,0	1/1:13,1:14:21.07:735,21,0	1/1:31,1:31:21.04:846,21,0	1/1:6,0:6:5.91:107,6,0	1/1:16,0:15:3.01:89,3,0	1/1:14,0:18:26.96:656,27,0	1/1:14,0:14:15.02:293,15,0	1/1:24,1:24:36.12:1042,36,0	1/1:16,5:26:30.06:1043,30,0	1/1:29,3:32:27.09:1027,27,0	1/1:3,5:14:3.01:173,3,0
chr10	28878132	.	A	AT	1012.66	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=0.334;DP=613;FS=1.625;HRun=1;HaplotypeScore=93.9367;InbreedingCoeff=0.9969;MQ=80.63;MQ0=0;MQRankSum=-4.970;QD=37.51;ReadPosRankSum=-0.537;VQSLOD=3.5915;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:81.26:0,81,1049	0/0:12,0:12:36.07:0,36,432	0/0:20,0:20:51.15:0,51,626	0/0:22,0:22:54.97:0,55,645	0/0:36,0:36:99:0,99,1244	0/0:16,0:16:39.13:0,39,504	0/0:22,0:22:57.12:0,57,719	0/0:32,0:32:93.30:0,93,1207	0/0:13,0:13:24.08:0,24,311	0/0:24,0:24:69.21:0,69,874	0/0:12,0:12:30.08:0,30,367	0/0:19,0:19:48.09:0,48,578	0/0:19,0:19:51.16:0,51,649	0/0:11,0:11:24.06:0,24,298	0/0:30,0:30:78.10:0,78,952	0/0:22,0:22:63.18:0,63,790	1/1:2,12:14:42.11:596,42,0	1/1:1,12:13:36.12:538,36,0	0/0:22,0:22:66.14:0,66,799	0/0:28,0:28:81.19:0,81,999	0/0:17,0:17:48.14:0,48,609	0/0:28,0:28:84.27:0,84,1089	0/0:17,0:17:48.16:0,48,620	0/0:21,0:21:54.18:0,54,700	0/0:34,0:34:81.26:0,81,1051	0/0:26,0:26:75.23:0,75,959	0/0:39,0:39:99:0,103,1324	0/0:11,0:11:27.09:0,27,350
chr10	28878149	.	CTT	C	218.19	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=1.883;DP=616;FS=2.778;HRun=10;HaplotypeScore=132.8570;InbreedingCoeff=0.9746;MQ=69.75;MQ0=2;MQRankSum=-3.277;QD=9.92;ReadPosRankSum=0.966;VQSLOD=1.2424;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:58.06:0,58,870	0/0:12,0:12:30.10:0,30,476	0/0:23,0:18:40.62:0,41,437	0/0:22,0:18:39:0,39,473	0/0:38,0:39:99:0,102,1398	0/0:16,0:16:30.09:0,30,453	0/0:25,0:25:53.51:0,54,687	0/0:30,0:30:51.99:0,52,732	0/0:11,0:11:23.90:0,24,295	0/0:22,0:22:48.11:0,48,693	0/0:9,0:10:24.08:0,24,361	0/0:20,0:20:43.12:0,43,583	0/0:22,0:22:51.88:0,52,724	0/0:11,0:11:24.03:0,24,331	0/0:23,0:24:59.64:0,60,864	0/0:23,0:24:62.35:0,62,770	1/1:5,8:13:18.02:199,18,0	1/1:4,5:9:12.01:134,12,0	0/0:25,0:26:68.67:0,69,989	0/0:27,0:28:71.63:0,72,967	0/0:16,0:17:39.13:0,39,617	0/0:21,0:21:54.12:0,54,783	0/0:20,0:20:48.66:0,49,639	0/0:20,0:20:39.54:0,40,566	0/0:37,0:37:77.94:0,78,1102	0/0:29,0:29:72.04:0,72,1028	0/0:38,0:38:99:0,100,1408	0/0:10,0:10:24.04:0,24,353
chr10	28878167	.	CTGTGTG	C	9218.07	PASS	AB=0.744;AC=44;AF=0.786;AN=56;BaseQRankSum=-3.059;DP=614;FS=1.758;HRun=0;HaplotypeScore=145.0013;InbreedingCoeff=0.4314;MQ=55.70;MQ0=14;MQRankSum=-0.102;QD=19.09;ReadPosRankSum=5.908;VQSLOD=4.4675;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:14,12:26:11.38:116,0,11	1/1:5,6:12:18.06:354,18,0	0/0:48,0:13:0.88:0,1,2	0/0:55,0:21:24.92:0,25,472	1/1:15,15:34:29.80:514,30,0	1/1:5,14:19:24.08:499,24,0	0/1:10,12:21:20.78:293,0,21	1/1:17,1:18:2.65:119,3,0	1/1:4,11:15:15.05:312,15,0	1/1:12,6:19:13.72:268,14,0	1/1:4,6:11:15.05:289,15,0	1/1:8,11:19:26.79:559,27,0	1/1:10,9:19:24.08:499,24,0	1/1:2,9:12:20.70:415,21,0	1/1:13,14:27:33.11:686,33,0	1/1:5,17:23:51.17:1032,51,0	0/0:6,0:19:17.17:0,17,400	0/0:3,0:9:15.52:0,16,394	0/1:20,1:21:41.54:152,0,42	1/1:10,15:26:30.10:563,30,0	1/1:11,5:16:3:25,3,0	1/1:8,10:19:18.06:351,18,0	1/1:9,7:17:15.05:291,15,0	1/1:10,7:18:5.82:104,6,0	1/1:13,15:28:21.07:436,21,0	1/1:12,16:28:45.12:872,45,0	1/1:13,11:25:19.22:413,19,0	0/1:5,3:8:53.82:56,0,54
chr10	28879057	.	C	CTTAT	34157.49	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-8.707;DP=644;FS=1.069;HRun=0;HaplotypeScore=88.3281;InbreedingCoeff=0.9973;MQ=83.02;MQ0=0;MQRankSum=-7.428;QD=59.82;ReadPosRankSum=3.763;VQSLOD=6.6910;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,32:39:87.21:2004,87,0	1/1:1,8:9:21.07:502,21,0	0/0:18,0:18:31.52:0,32,646	0/0:26,0:25:54.08:0,54,842	1/1:3,26:29:75.19:1771,75,0	1/1:2,26:29:69.24:1806,69,0	1/1:1,16:17:42.14:1097,42,0	1/1:8,30:41:99:2279,108,0	1/1:1,22:23:63.22:1648,63,0	1/1:1,15:17:45.12:1070,45,0	1/1:2,19:21:50.92:1081,51,0	1/1:2,15:18:45.15:1137,45,0	1/1:0,16:17:45.15:1178,45,0	1/1:2,19:22:54.19:1412,54,0	1/1:4,19:24:60.21:1528,60,0	1/1:3,22:26:66.23:1722,66,0	0/0:21,0:21:63.19:0,63,1112	0/0:8,0:8:21.07:0,21,372	1/1:5,11:17:39.04:743,39,0	1/1:3,21:24:57.20:1471,57,0	1/1:3,25:28:72.25:1844,72,0	1/1:3,15:19:45.07:1114,45,0	1/1:2,23:26:60.20:1451,60,0	1/1:0,19:20:36.12:942,36,0	1/1:3,23:25:72.25:1842,72,0	1/1:5,29:34:87.30:2166,87,0	1/1:6,24:31:62.92:1646,63,0	1/1:2,12:14:27.09:705,27,0
chr10	28879732	.	A	AT	471.36	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=2.421;DP=485;FS=8.909;HRun=1;HaplotypeScore=53.3194;InbreedingCoeff=0.9363;MQ=73.86;MQ0=1;MQRankSum=-3.517;QD=36.26;ReadPosRankSum=1.603;VQSLOD=3.3645;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:96.16:0,96,1228	0/0:7,0:7:21.07:0,21,273	0/0:8,0:8:21.05:0,21,258	0/0:8,0:8:21.06:0,21,265	0/0:28,0:28:75.23:0,75,958	0/0:22,0:22:66.21:0,66,856	0/0:13,0:13:36.04:0,36,432	0/0:26,0:26:78.22:0,78,963	0/0:15,0:15:42.14:0,42,545	0/0:20,0:20:60.17:0,60,763	0/0:23,0:23:66.17:0,66,837	0/0:13,0:13:39.12:0,39,494	0/0:12,0:12:36.12:0,36,467	0/0:12,0:12:33.11:0,33,428	0/0:21,0:21:60.19:0,60,767	0/0:12,0:12:33.07:0,33,413	1/1:0,11:11:33.11:493,33,0	1/1:0,2:2:6.02:90,6,0	0/0:16,0:16:48.16:0,48,623	0/0:31,0:30:84.27:0,84,1089	0/0:15,0:15:45.13:0,45,568	0/0:12,0:12:36.12:0,36,468	0/0:10,0:10:30.10:0,30,389	0/0:16,0:16:48.16:0,48,622	0/0:25,0:25:75.24:0,75,973	0/0:28,0:28:78.21:0,78,952	0/0:32,0:32:87.25:0,87,1097	0/0:13,0:13:36.12:0,36,467
chr10	28879801	.	A	AAT	11395.29	PASS	AB=0.574;AC=47;AF=0.839;AN=56;BaseQRankSum=-3.920;DP=338;FS=1.535;HRun=0;HaplotypeScore=35.0335;InbreedingCoeff=0.2870;MQ=67.82;MQ0=1;MQRankSum=-1.580;QD=34.95;ReadPosRankSum=2.480;VQSLOD=6.7798;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,25:28:57.19:947,57,0	1/1:1,1:2:3.01:50,3,0	0/0:3,0:3:3.01:0,3,37	0/0:6,0:5:6.01:0,6,65	1/1:7,20:27:25.35:944,25,0	1/1:1,15:16:39.13:648,39,0	1/1:1,6:7:12.04:200,12,0	1/1:9,26:36:84.25:1335,84,0	1/1:2,4:6:12.04:199,12,0	1/1:1,19:21:60.20:987,60,0	1/1:4,16:20:45.15:735,45,0	1/1:1,4:5:12.04:199,12,0	1/1:1,5:6:15.05:249,15,0	1/1:3,6:9:18.06:299,18,0	0/1:2,5:7:22.82:184,0,23	1/1:2,6:8:18.06:299,18,0	1/1:8,0:8:5.85:51,6,0	0/0:3,0:3:0:0,0,0	1/1:3,11:14:33.11:533,33,0	0/1:4,10:13:10.70:352,0,11	1/1:1,3:4:6.02:100,6,0	1/1:2,0:2:3.01:44,3,0	1/1:0,2:2:6.02:100,6,0	1/1:3,2:5:8.99:120,9,0	1/1:2,9:11:27.09:449,27,0	1/1:5,22:27:69.22:1100,69,0	1/1:2,24:26:57.19:945,57,0	0/1:3,12:15:13.78:325,0,14
chr10	28879811	.	T	TGGA	325.89	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=0.207;DP=332;FS=5.950;HRun=0;HaplotypeScore=82.3573;InbreedingCoeff=0.6657;MQ=70.96;MQ0=1;MQRankSum=-4.444;QD=29.63;ReadPosRankSum=-0.566;VQSLOD=3.1536;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:69.20:0,69,835	0/0:1,0:1:3.01:0,3,36	0/0:4,0:4:12.04:0,12,180	0/0:8,0:7:8.06:0,8,105	0/0:24,0:24:72.10:0,72,819	0/0:16,0:16:42.09:0,42,480	0/0:6,0:6:12.04:0,12,142	0/0:33,0:33:93.16:0,93,1234	0/0:5,0:5:15.05:0,15,194	0/0:23,0:23:69.19:0,69,886	0/0:20,0:20:57.08:0,57,707	0/0:5,0:5:15.05:0,15,188	0/0:5,0:5:15.05:0,15,178	0/0:8,0:8:21.05:0,21,239	0/0:8,0:8:18.06:0,18,254	0/0:6,0:6:18.05:0,18,213	1/1:2,4:7:15.05:321,15,0	1/1:1,3:4:6.02:112,6,0	0/0:15,0:15:42.08:0,42,513	0/0:12,0:11:30.08:0,30,387	0/0:3,0:3:6.02:0,6,72	0/0:1,0:1:3:0,3,29	0/0:5,0:5:15.05:0,15,228	0/0:6,0:6:15:0,15,173	0/0:11,0:11:33.10:0,33,437	0/0:29,0:29:84.22:0,84,1093	0/0:25,0:25:60.13:0,60,695	0/0:13,0:13:24.05:0,24,284
chr10	28879819	.	AT	A	348.83	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=1.132;DP=325;FS=23.603;HRun=4;HaplotypeScore=62.5819;InbreedingCoeff=0.6874;MQ=68.70;MQ0=1;MQRankSum=-1.786;QD=21.80;ReadPosRankSum=-2.200;VQSLOD=1.6071;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:75.22:0,75,1010	0/0:1,0:1:3.01:0,3,42	0/0:4,0:4:8.94:0,9,81	0/0:8,0:6:6.35:0,6,111	0/0:20,0:20:54.16:0,54,724	0/0:17,0:17:42.14:0,42,588	0/0:4,0:4:12.03:0,12,151	0/0:29,0:29:75.22:0,75,991	0/0:5,0:5:15.05:0,15,210	0/0:21,0:21:60.20:0,60,837	0/0:20,0:20:60.19:0,60,817	0/0:3,0:3:9.03:0,9,126	0/0:5,0:5:12.02:0,12,150	0/0:8,0:8:24.08:0,24,335	0/0:9,0:9:21.07:0,21,287	0/0:8,0:8:24.08:0,24,333	1/1:3,7:10:24.07:286,24,0	1/1:0,6:6:15.05:180,15,0	0/0:15,0:15:42.13:0,42,572	0/0:11,0:10:27.09:0,27,377	0/0:3,0:3:6.01:0,6,67	0/0:1,0:1:3.01:0,3,39	0/0:5,0:5:15.05:0,15,210	0/0:6,0:6:15.05:0,15,210	0/0:11,0:11:33.11:0,33,462	0/0:25,0:25:72.24:0,72,1008	0/0:28,0:28:72.21:0,72,962	0/0:12,0:12:24.08:0,24,336
chr10	28880473	.	A	AGTGT	2843.28	PASS	AB=0.836;AC=43;AF=0.827;AN=52;BaseQRankSum=-0.922;DP=499;FS=0.000;HRun=0;HaplotypeScore=95.5409;InbreedingCoeff=-0.0625;MQ=74.72;MQ0=5;MQRankSum=0.951;QD=6.69;ReadPosRankSum=-0.346;VQSLOD=2.2183;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:12,2:17:15.34:120,0,15	1/1:8,3:13:3.01:70,3,0	./.	0/1:31,0:21:0:0,0,0	1/1:11,0:11:9:145,9,0	1/1:26,0:26:23.49:342,23,0	0/1:22,3:27:40.14:65,0,40	./.	1/1:8,4:16:11.64:169,12,0	1/1:17,1:19:6.48:97,6,0	0/0:14,0:14:2.95:0,3,19	0/1:10,8:21:30.68:131,0,31	1/1:13,5:20:9.03:211,9,0	1/1:18,1:19:2.58:69,3,0	1/1:8,5:16:14.11:235,14,0	1/1:12,4:18:3.01:70,3,0	0/1:16,0:16:79:79,0,96	0/1:13,0:14:4.91:52,0,5	1/1:12,0:17:11.74:168,12,0	1/1:12,0:12:2.92:17,3,0	1/1:13,0:12:11.75:132,12,0	0/1:6,3:9:26.10:130,0,26	1/1:13,0:12:8.96:121,9,0	1/1:10,7:21:11.50:165,12,0	1/1:7,0:9:3.01:52,3,0	1/1:16,0:16:12:173,12,0	1/1:13,3:17:5.91:86,6,0	1/1:9,2:12:3.01:70,3,0
chr10	28881335	.	CA	C	15464.91	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=4.515;DP=559;FS=1.616;HRun=3;HaplotypeScore=60.6357;InbreedingCoeff=0.9902;MQ=64.87;MQ0=7;MQRankSum=1.325;QD=32.70;ReadPosRankSum=1.624;VQSLOD=5.1857;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,25:25:72.23:889,72,0	1/1:0,9:9:27.08:335,27,0	0/0:24,0:15:36.10:0,36,476	0/0:14,0:11:14.79:0,15,217	1/1:0,19:19:54.17:669,54,0	1/1:1,20:21:54.17:670,54,0	1/1:0,16:16:39.12:483,39,0	1/1:2,20:22:60.02:721,60,0	1/1:0,17:17:48.15:595,48,0	1/1:2,32:34:96.30:1190,96,0	1/1:0,17:17:48.15:595,48,0	1/1:1,20:21:54.17:670,54,0	1/1:1,23:24:63.20:781,63,0	1/1:1,15:16:42.13:521,42,0	1/1:0,23:23:60.19:744,60,0	1/1:0,13:13:36.11:446,36,0	0/0:31,0:31:90.30:0,90,1292	0/0:17,0:17:51.14:0,51,698	1/1:2,18:18:54.16:657,54,0	1/1:1,25:26:69.22:855,69,0	1/1:0,7:7:15.05:186,15,0	1/1:1,14:15:39.12:480,39,0	1/1:3,18:21:39.02:484,39,0	1/1:1,9:10:27.08:335,27,0	1/1:0,29:29:78.25:967,78,0	1/1:1,24:25:72.18:854,72,0	1/1:3,21:24:60.19:744,60,0	1/1:1,18:18:48.15:595,48,0
chr10	28882205	.	T	TAAA	15909.09	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-3.656;DP=588;FS=3.226;HRun=11;HaplotypeScore=107.7649;InbreedingCoeff=0.9917;MQ=67.00;MQ0=1;MQRankSum=-3.870;QD=31.32;ReadPosRankSum=-3.195;VQSLOD=3.6428;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,25:33:57.15:967,57,0	1/1:2,10:13:24.01:399,24,0	0/0:19,0:20:23.36:0,23,220	0/0:8,0:8:21.02:0,21,215	1/1:8,17:26:49.26:691,49,0	1/1:2,13:15:23.81:432,24,0	1/1:5,11:20:31.35:551,31,0	1/1:11,17:29:60.20:1081,60,0	1/1:4,13:17:33.11:621,33,0	1/1:8,13:24:44.86:631,45,0	1/1:5,7:12:16.59:236,17,0	1/1:7,9:18:30.06:494,30,0	1/1:7,11:19:28.63:476,29,0	1/1:6,18:24:45.11:783,45,0	1/1:5,20:25:51.17:923,51,0	1/1:3,6:12:30.08:487,30,0	0/0:26,0:26:69.09:0,69,777	0/0:26,0:26:57.06:0,57,666	1/1:10,10:23:58.40:992,58,0	1/1:2,12:17:45.06:682,45,0	1/1:3,11:15:27.04:421,27,0	1/1:9,16:27:55.48:837,55,0	1/1:9,14:26:37.78:685,38,0	1/1:8,15:25:51.17:944,51,0	1/1:5,13:19:32.09:484,32,0	1/1:7,16:27:66.17:1028,66,0	1/1:5,20:29:42.12:723,42,0	1/1:4,5:11:21.04:341,21,0
chr10	28882890	.	G	GGACTCGAGT	65326.64	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-7.880;DP=645;FS=7.748;HRun=0;HaplotypeScore=144.3161;InbreedingCoeff=0.9818;MQ=52.31;MQ0=0;MQRankSum=-9.916;QD=108.34;ReadPosRankSum=5.757;VQSLOD=5.3773;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,16:34:66.23:3126,66,0	1/1:2,12:14:42.14:2037,42,0	0/0:23,0:22:60.13:0,60,1476	0/0:19,0:18:48.15:0,48,1110	1/1:9,13:23:45.15:2137,45,0	1/1:5,16:24:63.22:2961,63,0	1/1:8,20:30:84.29:3848,84,0	1/1:17,14:36:99:4423,108,0	1/1:7,22:30:66.23:3114,66,0	1/1:8,13:25:72.20:3004,72,0	1/1:7,8:16:24.08:1134,24,0	1/1:3,22:26:63.22:3055,63,0	1/1:7,19:30:78.27:3734,78,0	1/1:5,9:17:33.11:1578,33,0	1/1:2,25:33:78.27:3782,78,0	1/1:3,14:20:45.15:2128,45,0	1/1:6,10:21:48.16:2254,48,0	1/1:6,5:13:30.10:1451,30,0	1/1:11,4:20:54.15:1774,54,0	1/1:4,11:19:45.11:2043,45,0	1/1:4,8:16:24.08:1125,24,0	1/1:3,10:18:36.12:1724,36,0	1/1:6,12:21:42.14:2011,42,0	1/1:10,14:29:51.18:2379,51,0	1/1:2,16:22:51.18:2473,51,0	1/1:8,18:29:84.28:3691,84,0	1/1:10,19:32:78.27:3756,78,0	1/1:0,4:5:12.04:584,12,0
chr10	28884555	.	AC	A	2789.68	PASS	AB=0.990;AC=43;AF=0.768;AN=56;BaseQRankSum=11.514;DP=549;FS=3.586;HRun=2;HaplotypeScore=171.7793;InbreedingCoeff=0.0626;MQ=62.42;MQ0=0;MQRankSum=-9.481;QD=5.38;ReadPosRankSum=10.191;VQSLOD=-0.1861;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:27:51.78:110,0,52	0/1:7,0:7:6.26:38,0,6	0/0:20,0:19:36.34:0,36,412	0/0:10,0:9:18.14:0,18,274	1/1:25,1:26:15.55:182,16,0	1/1:20,0:20:25.82:160,26,0	0/1:10,0:10:2.71:47,0,3	0/1:27,1:28:89.67:90,0,129	0/1:17,1:18:11.61:105,0,12	1/1:17,0:17:4.59:74,5,0	0/1:18,0:18:27.49:120,0,27	1/1:16,0:16:29.46:118,29,0	1/1:27,0:27:41.74:220,42,0	1/1:16,0:16:7.69:84,8,0	1/1:27,0:27:17.41:191,17,0	1/1:24,1:25:12.16:176,12,0	1/1:24,0:24:8.50:48,8,0	1/1:22,0:22:6.82:53,7,0	0/1:21,0:21:28.67:29,0,113	1/1:24,0:24:0.16:130,0,0	0/1:7,0:7:8.61:9,0,27	1/1:14,0:14:7.14:91,7,0	0/1:12,0:12:23.21:64,0,23	1/1:14,0:14:7.58:68,8,0	1/1:30,0:30:26.20:223,26,0	1/1:25,0:25:26.56:167,27,0	1/1:28,0:28:44.28:239,44,0	1/1:16,0:16:33.41:118,33,0
chr10	28884557	.	CT	C	13138.34	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=0.970;DP=552;FS=9.451;HRun=8;HaplotypeScore=141.5760;InbreedingCoeff=0.9637;MQ=61.43;MQ0=0;MQRankSum=-6.817;QD=25.22;ReadPosRankSum=4.199;VQSLOD=3.3697;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,20:27:57.08:549,57,0	1/1:1,6:7:18.03:174,18,0	0/0:20,0:18:33.98:0,34,312	0/0:11,0:10:23.86:0,24,254	1/1:6,20:26:69.08:655,69,0	1/1:0,19:19:57.09:550,57,0	1/1:1,9:10:27.04:261,27,0	1/1:10,18:28:63.10:607,63,0	1/1:5,14:19:51.06:482,51,0	1/1:1,15:16:48.07:458,48,0	1/1:3,15:18:45.07:434,45,0	1/1:3,14:17:48.03:450,48,0	1/1:2,26:28:81.12:776,81,0	1/1:2,14:16:45.07:434,45,0	1/1:1,24:25:72.12:694,72,0	1/1:5,21:26:72.10:688,72,0	1/1:1,23:24:66.11:637,66,0	1/1:1,21:22:60.10:579,60,0	1/1:8,12:20:42.05:400,42,0	1/1:5,19:24:66.08:626,66,0	1/1:5,4:9:8.99:82,9,0	1/1:1,13:14:36.06:347,36,0	1/1:2,10:12:24.04:231,24,0	1/1:2,12:14:36.04:340,36,0	1/1:2,28:30:84.13:809,84,0	1/1:2,23:25:69.11:665,69,0	1/1:2,27:29:84.12:804,84,0	1/1:1,15:16:42.06:405,42,0
chr10	28884576	.	AT	A	14298.42	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=6.768;DP=601;FS=6.781;HRun=5;HaplotypeScore=155.3489;InbreedingCoeff=0.9860;MQ=55.49;MQ0=0;MQRankSum=-9.811;QD=28.20;ReadPosRankSum=1.443;VQSLOD=2.8587;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,29:31:72.20:816,72,0	1/1:1,5:6:12.03:136,12,0	0/0:25,0:24:55.41:0,55,737	0/0:19,1:18:24.93:0,25,469	1/1:1,19:20:41.98:476,42,0	1/1:1,19:20:45.13:510,45,0	1/1:2,9:11:15.04:170,15,0	1/1:0,30:30:87.23:975,87,0	1/1:3,26:29:81.20:898,81,0	1/1:2,18:20:54.14:603,54,0	1/1:2,15:17:30.08:340,30,0	1/1:1,19:20:57.16:646,57,0	1/1:6,24:30:69.18:771,69,0	1/1:3,14:17:36.10:408,36,0	1/1:1,26:27:72.19:805,72,0	1/1:1,25:26:75.21:850,75,0	0/0:25,0:25:72.21:0,72,965	0/0:24,0:24:60.12:0,60,764	1/1:0,17:17:51.10:562,51,0	1/1:2,16:18:48.14:543,48,0	1/1:1,14:15:33.09:372,33,0	1/1:1,11:12:29.72:339,30,0	1/1:0,14:14:30.09:340,30,0	1/1:1,18:19:36.10:408,36,0	1/1:2,28:30:81.23:918,81,0	1/1:1,26:27:75.21:850,75,0	1/1:3,31:34:87.24:986,87,0	1/1:1,16:17:51.15:578,51,0
chr10	28885322	.	CACCACACCAAACCAA	C	9385.05	PASS	AB=0.598;AC=46;AF=0.821;AN=56;BaseQRankSum=-6.363;DP=816;FS=16.646;HRun=0;HaplotypeScore=220.1487;InbreedingCoeff=0.5935;MQ=66.82;MQ0=77;MQRankSum=1.689;QD=16.76;ReadPosRankSum=2.153;VQSLOD=2.3917;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:3,42:44:6.02:74,6,0	1/1:0,9:9:11.21:189,11,0	0/0:86,0:24:14.05:0,14,200	0/0:118,0:39:18.59:0,19,341	1/1:21,3:22:54.95:645,55,0	1/1:1,18:18:3.01:40,3,0	1/1:24,0:19:59.84:663,60,0	1/1:22,0:15:32.91:307,33,0	1/1:3,18:20:12.04:295,12,0	1/1:2,24:25:71.90:929,72,0	1/1:0,15:15:32.57:215,33,0	1/1:3,23:26:11.55:392,12,0	1/1:3,17:19:2.60:39,3,0	1/1:2,22:24:6.10:354,6,0	1/1:17,0:16:39.03:472,39,0	1/1:0,37:37:17.32:459,17,0	0/0:29,0:29:12.62:0,13,2180	0/0:23,0:23:33.39:0,33,715	0/1:13,12:14:46.55:451,0,47	1/1:0,22:22:52.68:462,53,0	1/1:30,0:29:77.61:864,78,0	1/1:2,27:29:38.34:269,38,0	1/1:3,14:17:11.96:195,12,0	0/1:3,34:37:31.70:32,0,114	1/1:0,21:21:9.03:171,9,0	1/1:4,20:23:56.95:853,57,0	1/1:1,16:17:8.87:356,9,0	1/1:1,8:9:15.05:661,15,0
chr10	28885681	.	ATG	A	18536.40	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-1.461;DP=959;FS=3.767;HRun=0;HaplotypeScore=182.7602;InbreedingCoeff=0.9751;MQ=56.62;MQ0=8;MQRankSum=6.225;QD=21.50;ReadPosRankSum=5.035;VQSLOD=5.1407;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:17,39:57:96.12:1136,96,0	1/1:1,8:9:24.07:289,24,0	0/0:48,0:6:13.29:0,13,187	0/0:48,0:10:26.85:0,27,303	1/1:5,21:26:41.96:506,42,0	1/1:3,9:12:27.08:326,27,0	1/1:12,28:42:72.04:857,72,0	1/1:16,15:32:47.95:506,48,0	1/1:11,27:38:51.16:615,51,0	1/1:8,30:37:84.20:972,84,0	1/1:3,10:13:20.90:253,21,0	1/1:8,29:39:66.20:796,66,0	1/1:3,27:30:69.21:824,69,0	1/1:9,32:41:81.04:952,81,0	1/1:6,32:39:74.63:864,75,0	1/1:5,24:30:60.18:724,60,0	1/1:6,27:36:65.70:725,66,0	1/1:8,22:30:54.17:651,54,0	1/1:10,6:15:15.03:168,15,0	1/1:5,16:21:32.89:398,33,0	1/1:26,87:113:99:2424,202,0	1/1:4,23:28:54:629,54,0	1/1:5,21:26:44.98:543,45,0	1/1:9,32:42:84.09:987,84,0	1/1:6,16:22:33.10:398,33,0	1/1:11,21:33:66.03:773,66,0	1/1:5,21:27:44.97:521,45,0	1/1:1,20:22:60.02:699,60,0
chr10	28886060	.	A	ACTGT	25733.08	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-10.582;DP=775;FS=1.035;HRun=0;HaplotypeScore=113.1126;InbreedingCoeff=0.8299;MQ=71.64;MQ0=0;MQRankSum=-1.956;QD=38.29;ReadPosRankSum=1.825;VQSLOD=4.7484;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:21,23:50:57.19:1355,57,0	1/1:4,9:14:24.08:586,24,0	0/0:26,0:26:30.07:0,30,462	0/0:32,0:31:48.16:0,48,774	1/1:14,21:35:60.21:1467,60,0	1/1:7,12:22:36.12:880,36,0	1/1:8,16:25:51.18:1225,51,0	1/1:26,18:48:69.22:1448,69,0	1/1:9,15:25:39.13:930,39,0	1/1:16,13:32:1.85:1041,2,0	1/1:9,16:25:42.14:1016,42,0	1/1:12,12:24:30.10:692,30,0	1/1:11,25:38:69.03:1677,69,0	1/1:6,14:22:39.13:916,39,0	1/1:17,23:43:60.21:1467,60,0	1/1:6,17:25:51.18:1247,51,0	0/0:21,0:21:48.15:0,48,764	0/0:24,0:24:54.17:0,54,850	1/1:12,7:19:2.16:556,2,0	1/1:9,22:31:8.34:1256,8,0	1/1:12,18:30:45.15:1100,45,0	1/1:4,10:15:27.09:658,27,0	1/1:11,16:27:42.14:1016,42,0	1/1:6,16:26:45.15:1092,45,0	1/1:9,18:28:2.13:1124,2,0	1/1:8,20:33:28.90:1590,29,0	1/1:9,16:25:41.84:1026,42,0	1/1:3,5:10:15.05:367,15,0
chr10	28886987	.	G	GA	873.74	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=1.962;DP=587;FS=0.000;HRun=6;HaplotypeScore=106.3562;InbreedingCoeff=0.9954;MQ=70.78;MQ0=7;MQRankSum=-4.015;QD=25.70;ReadPosRankSum=-1.435;VQSLOD=2.3690;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:93.11:0,93,934	0/0:8,0:8:24.05:0,24,245	0/0:23,0:14:23.24:0,23,244	0/0:20,0:18:27.18:0,27,373	0/0:23,0:23:60.13:0,60,612	0/0:22,0:22:36.22:0,36,518	0/0:22,0:22:48.11:0,48,490	0/0:30,0:30:75.16:0,75,764	0/0:26,0:26:70.04:0,70,705	0/0:21,0:21:60.13:0,60,610	0/0:18,0:18:51.11:0,51,520	0/0:23,0:23:60.13:0,60,611	0/0:23,0:23:60.11:0,60,603	0/0:19,0:19:39.08:0,39,397	0/0:24,0:23:63.14:0,63,642	0/0:20,0:20:57.13:0,57,581	1/1:4,15:19:48.05:550,48,0	1/1:6,9:14:39.07:445,39,0	0/0:12,0:11:24.05:0,24,244	0/0:16,0:16:45.09:0,45,456	0/0:17,0:17:42.09:0,42,428	0/0:18,0:18:48.11:0,48,489	0/0:20,0:20:51.11:0,51,520	0/0:21,0:21:39.45:0,39,504	0/0:25,0:24:60.13:0,60,610	0/0:21,0:21:60.13:0,60,612	0/0:37,0:36:84.18:0,84,856	0/0:9,0:9:27.06:0,27,275
chr10	28887014	.	CA	C	9799.07	PASS	AB=0.824;AC=50;AF=0.893;AN=56;BaseQRankSum=-5.379;DP=608;FS=34.096;HRun=11;HaplotypeScore=75.6665;InbreedingCoeff=0.6885;MQ=64.31;MQ0=8;MQRankSum=1.720;QD=17.28;ReadPosRankSum=2.583;VQSLOD=3.6512;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,37:42:67.19:756,67,0	1/1:1,9:10:26.97:221,27,0	0/0:23,0:11:13.29:0,13,158	0/0:18,0:14:2.51:0,3,146	1/1:3,22:25:59.23:524,59,0	1/1:3,19:23:23.99:393,24,0	1/1:3,20:23:50.93:418,51,0	1/1:8,18:26:48.76:393,49,0	1/1:5,14:19:44.93:366,45,0	1/1:4,14:18:41.94:345,42,0	1/1:5,21:26:56.90:468,57,0	1/1:6,15:21:24.93:410,25,0	1/1:2,20:22:53.87:441,54,0	1/1:0,15:15:35.96:295,36,0	1/1:3,20:23:53.93:443,54,0	1/1:1,21:22:56.93:468,57,0	0/1:17,0:18:0.71:1,0,51	0/1:10,0:12:4.87:5,0,14	1/1:5,8:12:26.96:220,27,0	1/1:2,16:19:40.95:326,41,0	1/1:3,10:13:23.97:197,24,0	1/1:4,18:22:21.95:387,22,0	1/1:5,19:24:13.48:376,13,0	1/1:5,19:24:44.94:369,45,0	1/1:5,18:22:21.94:386,22,0	1/1:4,19:23:53.65:431,54,0	1/1:1,43:44:99:911,111,0	1/1:2,11:13:31.78:252,32,0
chr10	28887017	.	A	AC	291.10	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.153;DP=611;FS=17.622;HRun=0;HaplotypeScore=112.5180;InbreedingCoeff=0.9927;MQ=65.34;MQ0=8;MQRankSum=-4.363;QD=8.32;ReadPosRankSum=-1.324;VQSLOD=2.0324;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,107,766	0/0:10,0:10:29.72:0,30,210	0/0:23,0:11:25.62:0,26,277	0/0:20,0:16:17.71:0,18,259	0/0:25,0:25:71.40:0,71,521	0/0:23,0:23:62.47:0,62,465	0/0:25,0:25:65.39:0,65,470	0/0:26,0:26:74.09:0,74,539	0/0:17,0:17:44.50:0,45,307	0/0:17,0:17:47.59:0,48,344	0/0:25,0:25:71.24:0,71,499	0/0:21,0:21:62.50:0,62,469	0/0:24,0:24:62.45:0,62,447	0/0:15,0:15:35.65:0,36,248	0/0:22,0:22:59.49:0,59,427	0/0:24,0:24:62.44:0,62,444	1/1:11,6:19:41.20:247,41,0	1/1:9,3:12:24.34:165,24,0	0/0:12,0:11:26.65:0,27,176	0/0:21,0:21:59.43:0,59,421	0/0:15,0:15:35.76:0,36,268	0/0:21,0:21:56.15:0,56,396	0/0:24,0:24:65.51:0,66,507	0/0:21,0:21:47.56:0,48,335	0/0:23,0:23:62.53:0,63,476	0/0:22,0:22:65.45:0,65,472	0/0:43,0:42:99:0,110,761	0/0:15,0:15:39.89:0,40,276
chr10	28887024	.	A	AC	291.33	PASS	AB=0.750;AC=3;AF=0.054;AN=56;BaseQRankSum=4.463;DP=634;FS=1.601;HRun=0;HaplotypeScore=111.8212;InbreedingCoeff=0.8351;MQ=69.01;MQ0=5;MQRankSum=-3.942;QD=8.83;ReadPosRankSum=-1.742;VQSLOD=3.6169;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,114,676	0/0:11,0:11:26.27:0,26,170	0/0:26,0:15:23.42:0,23,321	0/0:21,0:18:33.38:0,33,368	0/0:26,0:26:72.96:0,73,445	0/0:27,0:27:70.01:0,70,451	0/0:22,0:22:50.62:0,51,305	0/0:29,0:29:49.87:0,50,455	0/0:18,0:18:49.60:0,50,294	0/0:18,0:18:50.16:0,50,320	0/0:22,0:22:61.07:0,61,340	0/0:22,0:22:64.28:0,64,408	0/0:24,0:24:64.22:0,64,382	0/0:16,0:16:37.83:0,38,217	0/0:21,0:21:55.25:0,55,312	0/0:25,0:25:67.15:0,67,406	1/1:11,10:19:34.23:295,34,0	0/1:8,4:10:0.51:102,0,1	0/0:14,0:14:33.08:0,33,217	0/0:24,0:24:67.50:0,68,436	0/0:14,0:14:35.22:0,35,232	0/0:23,0:23:67.17:0,67,433	0/0:26,0:26:70.37:0,70,480	0/0:21,0:21:46.51:0,47,257	0/0:23,0:23:61.36:0,61,392	0/0:24,0:24:61.09:0,61,362	0/0:48,0:47:99:0,117,685	0/0:14,0:14:37.83:0,38,218
chr10	28888457	.	AGT	A	488.56	PASS	AB=0.894;AC=20;AF=0.400;AN=50;BaseQRankSum=6.142;DP=614;FS=0.625;HRun=0;HaplotypeScore=84.2271;InbreedingCoeff=-0.3605;MQ=63.94;MQ0=10;MQRankSum=0.689;QD=1.44;ReadPosRankSum=0.238;VQSLOD=1.4389;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,1:36:8.79:0,9,520	0/1:10,1:11:15.22:15,0,197	./.	./.	0/1:11,2:13:16.97:17,0,168	0/1:13,2:16:78.55:79,0,141	0/1:22,2:25:53.65:54,0,223	0/1:22,1:23:18.23:18,0,159	0/0:27,0:27:8.96:0,9,549	0/1:14,1:15:39.44:39,0,276	1/1:4,1:5:3.01:33,3,0	0/1:18,5:23:27.43:27,0,429	0/0:20,3:23:21.07:0,21,308	0/0:20,0:20:13.34:0,13,416	0/0:30,1:31:5.83:0,6,461	0/1:19,0:19:3.01:3,0,352	0/1:11,0:21:19.32:83,0,19	1/1:6,0:9:2.71:14,3,0	./.	0/1:12,1:13:9.19:9,0,291	0/0:48,0:50:55.06:0,55,913	0/1:21,5:26:72.73:73,0,233	0/1:17,1:18:9.19:9,0,286	0/1:42,2:44:24.36:24,0,824	0/1:20,0:20:0.06:0,0,412	0/0:13,0:13:27.08:0,27,367	0/1:20,6:26:99:127,0,285	0/1:11,2:13:6.24:6,0,301
chr10	28888782	.	ATGTGTG	A	3770.96	PASS	AB=0.842;AC=41;AF=0.788;AN=52;BaseQRankSum=5.913;DP=432;FS=22.337;HRun=0;HaplotypeScore=114.0636;InbreedingCoeff=0.4049;MQ=70.68;MQ0=6;MQRankSum=-3.860;QD=13.00;ReadPosRankSum=0.066;VQSLOD=1.3594;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:16,5:20:5.50:100,6,0	1/1:3,4:7:6.02:122,6,0	./.	0/0:27,0:19:3.01:0,3,77	1/1:6,6:13:9.03:135,9,0	1/1:7,6:14:24.08:448,24,0	1/1:19,5:24:3.47:311,3,0	0/0:23,0:22:12.13:0,12,108	0/1:13,3:16:99:104,0,110	1/1:13,1:14:0.90:57,1,0	1/1:3,1:4:3.01:60,3,0	./.	1/1:10,2:12:6.02:122,6,0	1/1:12,3:16:15.10:208,15,0	1/1:5,8:14:27.09:506,27,0	1/1:4,9:14:15.05:286,15,0	1/1:9,0:15:9.03:126,9,0	1/1:6,0:12:9.03:126,9,0	1/1:15,2:18:10.79:177,11,0	1/1:7,3:10:3.01:38,3,0	0/0:29,0:29:4.24:0,4,27	1/1:7,5:12:6.02:99,6,0	0/0:7,2:9:0.06:0,0,1	0/0:15,0:16:2.81:0,3,14	1/1:9,2:11:6.01:122,6,0	1/1:16,1:18:7.06:125,7,0	1/1:10,4:16:17.51:318,18,0	1/1:3,6:9:9.03:183,9,0
chr10	28889404	.	CG	C	5558.93	PASS	AB=1.000;AC=49;AF=0.907;AN=54;BaseQRankSum=-2.128;DP=249;FS=4.169;HRun=7;HaplotypeScore=29.0938;InbreedingCoeff=0.4677;MQ=75.33;MQ0=0;MQRankSum=0.449;QD=23.16;ReadPosRankSum=2.717;VQSLOD=3.9372;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,17:21:47.13:464,47,0	1/1:0,3:3:2.13:29,2,0	0/0:8,0:6:2.98:0,3,23	0/1:10,0:7:0:0,0,0	1/1:2,7:9:7.08:142,7,0	1/1:0,7:7:15.03:153,15,0	1/1:1,12:13:21.05:214,21,0	1/1:5,7:12:20.72:194,21,0	1/1:0,5:5:15.03:153,15,0	1/1:0,8:8:24.04:239,24,0	0/0:0,1:1:0:0,0,0	1/1:0,6:6:18.04:184,18,0	1/1:0,8:8:21.05:214,21,0	1/1:0,7:7:21.04:208,21,0	1/1:0,7:7:21.05:214,21,0	1/1:0,5:5:9.02:92,9,0	1/1:3,10:13:30.07:306,30,0	1/1:1,22:23:60.14:612,60,0	1/1:0,5:5:14.95:125,15,0	./.	1/1:3,31:34:81.18:825,81,0	1/1:1,4:5:9.02:92,9,0	1/1:0,1:1:3.01:31,3,0	1/1:1,12:13:33.07:337,33,0	1/1:0,10:10:27.06:275,27,0	1/1:0,7:7:21.05:213,21,0	1/1:0,6:6:18.04:183,18,0	1/1:0,2:2:6.01:61,6,0
chr10	28890603	.	T	TA	9480.20	PASS	AB=0.909;AC=53;AF=0.946;AN=56;BaseQRankSum=-3.709;DP=450;FS=16.932;HRun=10;HaplotypeScore=52.0516;InbreedingCoeff=0.6460;MQ=63.49;MQ0=0;MQRankSum=-2.444;QD=21.35;ReadPosRankSum=1.398;VQSLOD=3.9465;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,26:33:66:673,66,0	1/1:0,12:12:23.05:253,23,0	0/0:5,0:5:7.81:0,8,55	0/1:9,0:9:5.65:6,0,38	1/1:6,21:26:52.93:537,53,0	1/1:1,10:12:26.90:270,27,0	1/1:3,10:13:27:274,27,0	1/1:7,19:26:51.03:505,51,0	1/1:1,6:7:15.04:160,15,0	1/1:1,26:27:75.12:760,75,0	1/1:1,11:12:27.07:287,27,0	1/1:2,12:14:29.62:290,30,0	1/1:1,7:8:14.78:146,15,0	1/1:3,11:14:18.05:192,18,0	1/1:1,14:15:14.39:345,14,0	1/1:1,7:8:21.02:212,21,0	1/1:4,17:21:35.55:355,36,0	1/1:3,12:16:35.79:337,36,0	1/1:2,11:13:32.29:323,32,0	1/1:4,22:26:41.45:621,41,0	1/1:0,14:14:39.10:415,39,0	1/1:2,14:16:39.02:400,39,0	1/1:3,11:14:21.05:224,21,0	1/1:3,18:21:42.11:447,42,0	1/1:3,15:18:35.96:355,36,0	1/1:3,15:18:45.11:479,45,0	1/1:3,11:14:33.08:349,33,0	1/1:2,13:15:26.81:266,27,0
chr10	28890805	.	AAATGAATG	A	14116.35	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=2.071;DP=484;FS=19.435;HRun=0;HaplotypeScore=131.3476;InbreedingCoeff=0.6412;MQ=65.68;MQ0=2;MQRankSum=-2.838;QD=31.16;ReadPosRankSum=2.168;VQSLOD=3.2400;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,16:21:24.08:567,24,0	1/1:1,9:10:14.56:379,15,0	0/0:21,0:18:3:0,3,27	0/0:10,0:8:12.04:0,12,296	1/1:10,6:16:18.01:390,18,0	1/1:7,19:26:45.15:1139,45,0	1/1:7,11:18:15.05:370,15,0	1/1:21,9:30:27.04:337,27,0	1/1:7,8:15:21.07:518,21,0	1/1:7,16:23:45.14:1064,45,0	1/1:8,19:27:51.06:1111,51,0	1/1:7,11:18:24.08:608,24,0	1/1:9,14:22:33.11:835,33,0	1/1:11,5:16:6.02:148,6,0	1/1:6,14:20:33.11:832,33,0	1/1:1,13:14:27.09:681,27,0	1/1:12,0:16:9.03:155,9,0	1/1:7,0:14:12:224,12,0	1/1:13,7:19:21.07:464,21,0	1/1:6,15:21:42.10:892,42,0	1/1:6,7:13:8.96:163,9,0	1/1:4,6:10:18.06:451,18,0	1/1:8,6:14:15.05:379,15,0	1/1:5,9:14:5.99:151,6,0	1/1:2,13:15:27.09:683,27,0	1/1:4,16:20:45.05:891,45,0	1/1:6,8:14:24.08:608,24,0	1/1:3,1:4:3.01:76,3,0
chr10	28891826	.	G	GA	7535.89	PASS	AB=0.588;AC=51;AF=0.911;AN=56;BaseQRankSum=-4.834;DP=477;FS=6.536;HRun=1;HaplotypeScore=70.7495;InbreedingCoeff=0.7533;MQ=82.66;MQ0=0;MQRankSum=-6.760;QD=17.17;ReadPosRankSum=0.224;VQSLOD=4.7391;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,20:24:27.03:324,27,0	1/1:1,10:11:12.04:160,12,0	0/0:26,0:25:35.42:0,35,421	0/0:12,0:10:22.69:0,23,170	1/1:1,19:22:41.76:381,42,0	1/1:1,18:19:21.06:267,21,0	1/1:3,14:17:34.19:443,34,0	1/1:4,23:28:56.72:543,57,0	1/1:16,9:25:50.82:555,51,0	1/1:2,12:14:34.39:279,34,0	1/1:2,14:16:32.82:305,33,0	1/1:2,22:24:25.80:323,26,0	1/1:1,9:10:18.06:239,18,0	1/1:3,12:15:22.16:240,22,0	1/1:3,21:26:45.19:526,45,0	1/1:2,13:15:18.06:240,18,0	1/1:11,0:18:37.82:188,38,0	1/1:3,0:7:19.69:94,20,0	1/1:0,13:13:32.65:325,33,0	1/1:0,14:14:32.75:261,33,0	0/1:3,7:10:7.46:58,0,7	1/1:4,12:16:25.15:243,25,0	1/1:3,14:17:20.95:267,21,0	1/1:1,25:26:33.07:424,33,0	1/1:1,12:13:13.29:164,13,0	1/1:5,8:13:30.01:317,30,0	1/1:1,17:18:20.74:251,21,0	1/1:0,8:8:9.03:120,9,0
chr10	28892395	.	T	TA	12252.84	PASS	AB=0.735;AC=47;AF=0.839;AN=56;BaseQRankSum=-8.899;DP=690;FS=3.839;HRun=11;HaplotypeScore=70.0494;InbreedingCoeff=0.4077;MQ=72.35;MQ0=1;MQRankSum=-3.122;QD=18.85;ReadPosRankSum=1.172;VQSLOD=6.0781;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,31:36:29.15:655,29,0	1/1:0,14:14:39.08:396,39,0	0/1:16,0:12:6.28:6,0,57	0/1:22,2:20:41.78:42,0,143	1/1:5,26:33:55.92:705,56,0	1/1:6,20:28:13.57:481,14,0	0/1:4,14:19:7:269,0,7	1/1:11,22:33:63.01:605,63,0	1/1:4,22:26:42.08:426,42,0	1/1:10,11:21:36.54:365,37,0	1/1:3,15:19:48.05:469,48,0	1/1:7,25:32:69.14:701,69,0	1/1:4,16:20:26.84:274,27,0	1/1:5,20:25:30.91:494,31,0	1/1:4,23:28:65.97:654,66,0	1/1:1,28:29:72.14:731,72,0	0/0:24,1:26:31.31:0,31,407	0/0:14,0:14:31.38:0,31,272	1/1:7,12:21:23.06:382,23,0	1/1:6,28:34:51.87:690,52,0	1/1:3,12:15:33.06:332,33,0	1/1:8,18:27:39.71:564,40,0	1/1:3,22:26:42.73:594,43,0	0/1:4,13:19:4.64:291,0,5	1/1:1,27:28:66.13:670,66,0	1/1:7,29:36:63.97:808,64,0	1/1:9,25:34:39.89:586,40,0	0/1:3,3:7:11.38:63,0,11
chr10	28892738	.	GTT	G	8807.50	PASS	AB=0.621;AC=51;AF=0.911;AN=56;BaseQRankSum=-4.741;DP=515;FS=10.733;HRun=14;HaplotypeScore=72.2754;InbreedingCoeff=0.6909;MQ=71.43;MQ0=3;MQRankSum=0.466;QD=18.01;ReadPosRankSum=4.361;VQSLOD=3.2331;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,26:31:56.98:527,57,0	1/1:3,4:8:11.67:95,12,0	0/0:15,0:9:15.43:0,15,130	0/0:10,0:8:7.75:0,8,54	1/1:3,23:27:41.82:556,42,0	1/1:2,14:19:23.58:300,24,0	1/1:2,13:15:36.03:333,36,0	1/1:7,15:23:42.83:375,43,0	1/1:2,17:19:44.75:416,45,0	1/1:4,15:20:44.70:396,45,0	1/1:5,16:21:5.04:366,5,0	1/1:2,8:10:18.01:167,18,0	1/1:3,10:15:35.48:349,35,0	1/1:1,14:15:42.03:389,42,0	1/1:4,15:20:29.71:262,30,0	1/1:0,19:20:47.80:428,48,0	1/1:7,22:29:53.94:500,54,0	1/1:4,11:15:28.21:253,28,0	0/1:7,10:18:5.44:255,0,5	1/1:0,17:17:26.96:250,27,0	1/1:3,3:6:8.95:83,9,0	1/1:2,7:9:20.95:186,21,0	1/1:4,22:29:41.50:466,41,0	1/1:1,18:19:45.04:416,45,0	1/1:5,17:23:32.01:351,32,0	1/1:5,15:22:50.20:424,50,0	1/1:5,24:28:56.07:526,56,0	1/1:4,5:9:14.99:139,15,0
chr10	28893081	.	TA	T	1386.52	PASS	AB=0.995;AC=47;AF=0.839;AN=56;BaseQRankSum=4.865;DP=589;FS=0.000;HRun=13;HaplotypeScore=181.2966;InbreedingCoeff=0.1272;MQ=69.43;MQ0=1;MQRankSum=-1.888;QD=2.42;ReadPosRankSum=6.320;VQSLOD=-0.4243;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:36,0:36:12.03:45,12,0	0/1:8,0:8:3.69:8,0,4	0/1:24,1:17:6.92:7,0,128	0/0:16,0:12:15.11:0,15,114	1/1:21,0:22:18.22:47,18,0	1/1:18,0:18:4.39:24,4,0	1/1:23,0:23:19.15:57,19,0	0/1:34,0:34:24.88:36,0,25	1/1:20,0:20:21.48:52,21,0	0/1:25,0:25:5.46:26,0,5	1/1:12,0:12:12.13:30,12,0	0/1:28,0:28:1.42:35,0,1	1/1:25,0:26:22.58:57,23,0	1/1:18,0:18:21.48:52,21,0	1/1:24,0:25:24.91:59,25,0	0/1:26,0:26:7.03:28,0,7	1/1:3,15:18:38.76:285,39,0	1/1:5,16:21:41.74:306,42,0	0/1:19,0:19:6.56:20,0,7	1/1:21,0:20:21.46:52,21,0	1/1:26,0:26:17.06:42,17,0	1/1:15,0:15:13.23:33,13,0	1/1:16,0:16:2.37:20,2,0	1/1:18,0:18:15.26:38,15,0	1/1:10,0:10:12.45:29,12,0	1/1:27,0:27:19.32:59,19,0	1/1:19,0:19:3.98:29,4,0	1/1:17,0:17:18.86:46,19,0
chr10	28893092	.	AAAC	A	17154.13	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=0.762;DP=610;FS=4.060;HRun=0;HaplotypeScore=159.6197;InbreedingCoeff=0.9961;MQ=72.36;MQ0=1;MQRankSum=-3.151;QD=32.55;ReadPosRankSum=3.155;VQSLOD=5.4796;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,31:35:75.04:971,75,0	1/1:1,7:8:18.06:259,18,0	0/0:28,0:20:24.30:0,24,430	0/0:17,0:14:25.96:0,26,327	1/1:2,23:25:62.77:769,63,0	1/1:2,19:21:42.05:571,42,0	1/1:1,23:24:63.21:907,63,0	1/1:4,34:38:99:1220,102,0	1/1:2,19:21:54.01:725,54,0	1/1:3,23:26:68.63:819,69,0	1/1:1,10:11:27.04:389,27,0	1/1:2,25:27:66.22:950,66,0	1/1:2,20:22:54.13:745,54,0	1/1:0,17:17:48.16:690,48,0	1/1:1,25:26:60.20:849,60,0	1/1:2,22:24:54.18:776,54,0	0/0:20,0:20:50.99:0,51,443	0/0:18,0:18:47.98:0,48,418	1/1:4,20:24:68.56:727,69,0	1/1:3,22:24:62.77:778,63,0	1/1:2,24:26:53.40:707,53,0	1/1:0,16:16:36.03:485,36,0	1/1:1,15:16:33.11:468,33,0	1/1:2,18:20:42.03:555,42,0	1/1:0,12:12:27.09:389,27,0	1/1:1,27:28:78.04:1042,78,0	1/1:2,16:18:45.14:647,45,0	1/1:0,17:17:51.17:715,51,0
chr10	28893095	.	C	CA	10153.79	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=5.310;DP=592;FS=7.959;HRun=13;HaplotypeScore=159.4289;InbreedingCoeff=0.9730;MQ=74.43;MQ0=1;MQRankSum=-4.230;QD=20.07;ReadPosRankSum=3.059;VQSLOD=4.4617;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:34,1:35:72.43:592,72,0	1/1:7,0:7:17.83:130,18,0	0/0:27,0:19:12.98:0,13,330	0/0:20,0:17:8.97:0,9,264	1/1:25,0:25:61.85:490,62,0	1/1:19,1:20:41.69:332,42,0	1/1:23,0:23:61.47:381,61,0	1/1:36,1:37:99:890,100,0	1/1:19,2:21:46.74:375,47,0	1/1:23,0:23:68.68:641,69,0	1/1:11,0:11:26.55:181,27,0	1/1:25,0:25:65.41:486,65,0	1/1:21,0:22:53.03:385,53,0	1/1:17,0:17:47.38:336,47,0	1/1:26,0:26:59.49:458,59,0	1/1:22,0:22:53.56:405,54,0	0/0:18,0:18:51.15:0,51,608	0/0:21,0:21:51.10:0,51,579	1/1:22,1:23:66.97:665,67,0	1/1:22,0:21:62.45:512,62,0	1/1:24,0:24:53.91:465,54,0	1/1:16,0:16:33.99:264,34,0	1/1:15,0:15:32.39:225,32,0	1/1:18,2:20:41.77:343,42,0	1/1:12,0:12:26.65:191,27,0	1/1:27,0:27:77.52:668,78,0	1/1:16,0:16:44.43:308,44,0	1/1:17,0:17:50.87:430,51,0
chr10	28894293	.	A	AG	652.92	PASS	AB=0.720;AC=8;AF=0.148;AN=54;BaseQRankSum=4.452;DP=228;FS=155.924;HRun=3;HaplotypeScore=43.2204;InbreedingCoeff=-0.2048;MQ=107.77;MQ0=0;MQRankSum=-8.356;QD=9.33;ReadPosRankSum=4.805;VQSLOD=-0.1916;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:5:12.51:0,13,164	0/1:2,4:6:68.72:85,0,69	0/0:25,0:22:71.93:0,72,1000	0/0:16,0:13:42.11:0,42,575	0/0:4,2:6:6.02:0,6,78	0/0:2,0:2:3.01:0,3,42	0/0:12,0:12:36.08:0,36,477	0/0:13,0:13:36.12:0,36,502	0/0:11,0:11:27.09:0,27,352	0/1:7,1:8:22.90:23,0,269	0/1:4,2:6:17.44:17,0,147	0/0:4,0:4:9.03:0,9,121	./.	0/0:4,0:4:12.04:0,12,163	0/0:3,0:3:9.03:0,9,121	0/0:4,0:4:6.02:0,6,84	0/0:4,0:4:12.04:0,12,158	0/0:6,0:6:15.01:0,15,187	0/0:11,0:11:33.11:0,33,459	0/1:7,12:19:99:315,0,175	0/0:8,0:8:15.04:0,15,210	0/1:5,2:7:27.71:28,0,36	0/1:4,3:7:87.19:87,0,102	0/0:8,0:8:24.08:0,24,331	0/1:4,8:12:99:200,0,134	0/1:4,1:5:30.75:31,0,153	0/0:7,0:7:21.07:0,21,293	0/0:8,0:8:24.08:0,24,335
chr10	28894801	.	A	AT	10809.94	PASS	AB=0.754;AC=52;AF=0.963;AN=54;BaseQRankSum=-1.616;DP=581;FS=0.000;HRun=9;HaplotypeScore=69.2846;InbreedingCoeff=0.2306;MQ=39.22;MQ0=122;MQRankSum=-1.103;QD=18.87;ReadPosRankSum=1.348;VQSLOD=4.9879;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,23:25:57.83:600,58,0	1/1:3,6:9:17.84:167,18,0	./.	0/1:15,1:1:0:0,0,0	1/1:1,28:24:37.71:594,38,0	1/1:2,25:24:5:498,5,0	1/1:5,18:21:51.10:548,51,0	1/1:3,26:18:48.13:530,48,0	1/1:3,23:22:54.08:582,54,0	1/1:3,24:23:63.15:681,63,0	1/1:4,19:22:51.10:549,51,0	1/1:1,21:19:41.91:451,42,0	1/1:2,12:10:24.06:265,24,0	1/1:1,25:25:57.11:617,57,0	1/1:5,23:22:29.87:299,30,0	1/1:2,20:21:25.05:491,25,0	1/1:3,0:10:19.89:99,20,0	1/1:2,1:9:17.21:104,17,0	1/1:7,20:17:42.07:451,42,0	1/1:1,23:20:51.10:550,51,0	1/1:1,14:12:27.07:299,27,0	1/1:3,14:11:17.99:186,18,0	1/1:7,23:25:56.92:616,57,0	1/1:6,15:18:10.14:326,10,0	0/1:4,13:14:18.62:266,0,19	1/1:0,26:23:63.17:697,63,0	1/1:2,12:11:23.90:245,24,0	1/1:0,6:3:9.02:100,9,0
chr10	28895770	.	G	GA	12469.74	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-7.738;DP=556;FS=1.253;HRun=9;HaplotypeScore=52.2958;InbreedingCoeff=0.9423;MQ=75.33;MQ0=0;MQRankSum=-0.337;QD=25.09;ReadPosRankSum=-0.194;VQSLOD=5.3563;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,15:19:33.09:365,33,0	1/1:2,9:11:18.05:199,18,0	0/0:12,0:12:5.96:0,6,52	0/0:8,0:8:14.96:0,15,123	1/1:2,15:17:39.06:418,39,0	1/1:2,16:19:47.96:512,48,0	1/1:2,17:19:48.13:531,48,0	1/1:3,27:30:78.19:852,78,0	1/1:1,26:27:69.19:763,69,0	1/1:4,13:17:42.09:453,42,0	1/1:5,13:18:36.02:371,36,0	1/1:5,22:27:60.16:664,60,0	1/1:2,16:19:44.99:479,45,0	1/1:2,18:20:28.10:538,28,0	1/1:2,23:25:63.04:696,63,0	1/1:1,15:16:42.11:465,42,0	0/0:21,0:21:56.98:0,57,495	0/0:17,1:18:11.81:0,12,331	1/1:7,19:27:13.79:587,14,0	1/1:6,16:22:51.07:549,51,0	1/1:2,11:13:29.91:312,30,0	1/1:1,10:11:21.06:232,21,0	1/1:5,16:21:16.06:405,16,0	1/1:1,17:18:48.13:531,48,0	1/1:5,13:18:30.08:332,30,0	1/1:5,28:33:78.14:831,78,0	1/1:5,24:28:66.16:721,66,0	1/1:0,21:21:60.16:664,60,0
chr10	28896754	.	ATT	A	559.60	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-0.494;DP=544;FS=3.632;HRun=14;HaplotypeScore=82.1393;InbreedingCoeff=0.7909;MQ=70.20;MQ0=1;MQRankSum=0.172;QD=12.44;ReadPosRankSum=5.309;VQSLOD=2.8112;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:34:47.87:0,48,420	0/0:2,0:9:14.98:0,15,134	0/0:18,0:14:20.56:0,21,273	0/0:16,0:12:9.72:0,10,113	0/0:5,0:20:40.64:0,41,334	0/0:3,0:21:27.04:0,27,258	0/0:9,0:28:30.04:0,30,292	0/0:14,0:35:72.09:0,72,630	0/0:3,0:12:12.02:0,12,128	0/0:8,0:21:46.22:0,46,398	0/0:7,0:20:27.84:0,28,231	0/0:5,0:18:12.02:0,12,115	0/0:10,0:18:20.97:0,21,192	0/0:6,0:20:12.78:0,13,104	0/0:2,0:28:18.01:0,18,177	0/0:0,0:14:21.03:0,21,199	1/1:3,19:22:9.17:326,9,0	1/1:6,16:23:30.20:348,30,0	0/0:7,0:18:41.84:0,42,362	0/0:4,0:16:23.97:0,24,213	0/0:7,0:16:22.82:0,23,195	0/0:5,0:19:40.40:0,40,348	0/0:6,0:13:20.01:0,20,160	0/0:6,0:20:6.95:0,7,59	0/0:3,0:23:33.06:0,33,324	0/0:3,0:17:45.40:0,45,427	0/0:7,0:15:11.97:0,12,116	0/0:3,0:5:6.01:0,6,70
chr10	28896939	.	CGTGCGT	C	14755.54	PASS	AC=50;AF=0.926;AN=54;BaseQRankSum=1.309;DP=571;FS=3.799;HRun=0;HaplotypeScore=125.9374;InbreedingCoeff=0.8235;MQ=61.64;MQ0=2;MQRankSum=-6.912;QD=28.43;ReadPosRankSum=5.521;VQSLOD=4.1978;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,25:33:21.03:454,21,0	./.	0/0:28,0:21:47.45:0,47,968	0/0:23,0:22:31.29:0,31,727	1/1:5,11:16:27.09:582,27,0	1/1:1,16:17:36.12:778,36,0	1/1:6,11:17:18.06:389,18,0	1/1:6,25:31:66.20:1226,66,0	1/1:3,22:25:51.18:1102,51,0	1/1:7,5:12:15.04:285,15,0	1/1:3,12:15:22.63:431,23,0	1/1:2,16:18:42.14:908,42,0	1/1:3,20:23:39.13:843,39,0	1/1:7,19:26:36.12:763,36,0	1/1:4,21:25:48.16:1037,48,0	1/1:3,23:26:57.06:1181,57,0	1/1:9,19:28:12.04:225,12,0	1/1:7,11:18:15.05:324,15,0	1/1:7,11:18:36.07:619,36,0	1/1:1,12:13:24.04:518,24,0	1/1:15,23:38:0.76:2,1,0	1/1:4,13:17:18.06:387,18,0	1/1:4,12:16:15.52:324,16,0	1/1:5,20:25:9.19:195,9,0	1/1:1,13:14:21.07:454,21,0	1/1:9,17:26:51.18:1082,51,0	1/1:7,10:17:23.96:519,24,0	1/1:1,4:5:6.02:130,6,0
chr10	28897237	.	G	GATAAATAA	10420	PASS	AB=1.000;AC=51;AF=0.911;AN=56;BaseQRankSum=-1.278;DP=405;FS=0.000;HRun=0;HaplotypeScore=104.0771;InbreedingCoeff=0.5036;MQ=60.83;MQ0=0;MQRankSum=1.498;QD=27.14;ReadPosRankSum=-0.699;VQSLOD=4.1942;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,14:26:20.88:581,21,0	1/1:3,4:9:8.61:367,9,0	0/0:11,0:9:11.93:0,12,180	0/0:10,0:7:9.01:0,9,120	1/1:7,5:15:18.02:247,18,0	1/1:19,0:19:36.52:542,37,0	1/1:19,0:19:29.87:461,30,0	1/1:44,0:44:77.93:908,78,0	1/1:4,4:8:6.02:247,6,0	1/1:2,9:12:30.10:848,30,0	1/1:5,4:12:17.91:275,18,0	1/1:10,3:13:18.60:528,19,0	1/1:2,6:9:6.02:245,6,0	1/1:8,3:11:20.92:480,21,0	1/1:5,5:12:3.01:124,3,0	1/1:10,2:12:23.98:498,24,0	1/1:21,0:21:45.03:510,45,0	1/1:17,0:17:16.53:282,17,0	1/1:22,0:22:25.48:611,25,0	1/1:8,3:15:17.92:344,18,0	1/1:8,0:8:14.79:114,15,0	1/1:1,3:7:6.02:154,6,0	1/1:2,2:6:8.92:172,9,0	1/1:3,0:3:3.01:34,3,0	1/1:3,14:19:15.05:614,15,0	1/1:6,5:17:32.60:932,33,0	1/1:9,10:21:9.18:265,9,0	0/1:6,0:6:9.85:38,0,10
chr10	28899240	.	A	ATG	19694.16	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-5.563;DP=565;FS=3.663;HRun=0;HaplotypeScore=82.4719;InbreedingCoeff=0.7611;MQ=74.67;MQ0=3;MQRankSum=-2.700;QD=37.73;ReadPosRankSum=4.401;VQSLOD=7.1847;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,17:18:33.11:592,33,0	1/1:1,11:12:26.98:445,27,0	0/0:25,0:16:9.26:0,9,141	0/0:18,0:14:0.47:0,0,100	1/1:1,24:25:69.06:1130,69,0	1/1:0,21:22:45.15:808,45,0	1/1:2,15:17:33.11:593,33,0	1/1:6,28:35:96.20:1495,96,0	1/1:1,17:18:45.15:787,45,0	1/1:1,31:32:90.17:1386,90,0	1/1:3,21:24:57.11:948,57,0	1/1:0,10:10:27.09:485,27,0	1/1:2,21:24:53.76:918,54,0	1/1:1,25:24:54.18:966,54,0	1/1:0,13:15:30.10:539,30,0	1/1:0,16:16:39.13:700,39,0	1/1:16,0:18:19.15:176,19,0	1/1:15,0:14:25.43:158,25,0	1/1:2,23:27:81.17:1258,81,0	1/1:6,22:28:69.06:1158,69,0	1/1:0,7:8:17.99:287,18,0	1/1:1,15:17:40.76:607,41,0	1/1:3,25:28:57.09:978,57,0	1/1:0,4:4:6.02:108,6,0	1/1:0,22:23:48.16:858,48,0	1/1:2,16:17:48.08:686,48,0	1/1:2,26:28:63.11:1092,63,0	1/1:0,12:12:30.10:537,30,0
chr10	28899241	.	T	TG	7904.16	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-1.841;DP=545;FS=0.662;HRun=0;HaplotypeScore=109.2763;InbreedingCoeff=0.5760;MQ=72.99;MQ0=4;MQRankSum=-0.866;QD=15.81;ReadPosRankSum=8.056;VQSLOD=6.4597;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:18:15.31:241,15,0	1/1:11,0:11:26.68:180,27,0	0/0:27,0:17:13.79:0,14,184	0/0:18,0:13:0.18:0,0,75	1/1:26,0:26:68.34:484,68,0	1/1:20,0:20:44.64:310,45,0	1/1:16,0:16:13.18:205,13,0	1/1:31,0:31:36.75:554,37,0	1/1:16,1:17:44.61:311,45,0	1/1:32,0:31:86.37:616,86,0	1/1:21,0:21:56.17:399,56,0	1/1:10,0:10:26.78:186,27,0	1/1:22,2:24:53.11:386,53,0	1/1:24,0:22:53.52:369,54,0	1/1:15,0:15:29.76:207,30,0	1/1:15,0:15:38.69:269,39,0	1/1:18,0:18:3.59:119,4,0	1/1:17,1:17:2.52:119,3,0	1/1:27,0:27:64.72:514,65,0	1/1:28,0:28:30.17:419,30,0	1/1:7,0:7:2.61:88,3,0	1/1:16,0:16:19.03:237,19,0	1/1:26,1:26:56.48:407,56,0	1/1:4,0:4:5.95:41,6,0	1/1:22,0:22:47.53:327,48,0	1/1:16,0:15:17.52:280,18,0	1/1:26,1:27:43.89:433,44,0	1/1:10,0:10:29.74:205,30,0
chr10	28899251	.	C	CT	188.94	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=1.966;DP=525;FS=34.219;HRun=10;HaplotypeScore=125.6796;InbreedingCoeff=0.8703;MQ=69.31;MQ0=4;MQRankSum=-4.824;QD=5.56;ReadPosRankSum=-0.838;VQSLOD=-0.6304;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:44.99:0,45,419	0/0:11,0:11:23.91:0,24,212	0/0:25,0:16:10.76:0,11,85	0/0:16,0:11:5.59:0,6,49	0/0:28,0:28:77.39:0,77,693	0/0:21,0:21:51.05:0,51,476	0/0:17,0:17:45.04:0,45,428	0/0:32,0:32:85.64:0,86,793	0/0:16,0:16:48.02:0,48,437	0/0:26,0:25:69.01:0,69,637	0/0:20,0:20:53.73:0,54,482	0/0:9,0:9:26.76:0,27,235	0/0:20,0:20:48.01:0,48,437	0/0:27,0:25:62.67:0,63,557	0/0:15,0:15:30:0,30,280	0/0:14,0:14:38.95:0,39,356	1/1:9,9:18:15.04:172,15,0	1/1:9,7:14:12.02:129,12,0	0/0:24,0:24:42.99:0,43,425	0/0:27,0:27:71.18:0,71,663	0/0:6,0:6:17.96:0,18,156	0/0:13,0:13:36.01:0,36,328	0/0:26,0:25:59.36:0,59,522	0/0:5,0:5:9.01:0,9,85	0/0:20,0:20:50.79:0,51,460	0/0:16,0:15:41.54:0,42,375	0/0:26,0:26:72.03:0,72,661	0/0:10,0:10:30.02:0,30,275
chr10	28900388	.	T	TA	222.95	PASS	AB=0.667;AC=3;AF=0.054;AN=56;BaseQRankSum=5.742;DP=430;FS=1.172;HRun=10;HaplotypeScore=49.9504;InbreedingCoeff=0.5078;MQ=59.20;MQ0=5;MQRankSum=-1.597;QD=10.13;ReadPosRankSum=-0.315;VQSLOD=2.0516;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:47.94:0,48,394	0/0:5,0:5:11.89:0,12,89	0/0:15,0:12:25.79:0,26,200	0/0:10,0:5:1.40:0,1,22	0/0:19,0:19:41.92:0,42,345	0/0:13,0:13:26.95:0,27,222	0/0:7,0:8:23.01:0,23,178	0/0:28,1:27:47.89:0,48,394	0/0:6,0:6:14.98:0,15,123	0/0:15,0:15:32.94:0,33,271	0/0:18,0:18:32.94:0,33,271	0/0:12,0:13:20.96:0,21,172	0/0:16,0:16:44.95:0,45,369	0/0:17,0:17:41.94:0,42,345	0/0:11,0:11:20.96:0,21,172	0/0:15,0:15:32.92:0,33,267	0/1:7,7:14:22.21:194,0,22	1/1:4,4:8:12.03:128,12,0	0/0:12,0:10:23.97:0,24,197	0/0:20,0:20:50.92:0,51,416	0/0:8,0:8:14.97:0,15,123	0/0:20,0:20:44.94:0,45,369	0/0:26,0:26:71.82:0,72,582	0/0:11,0:11:29.91:0,30,241	0/0:27,0:27:53.33:0,53,439	0/0:14,0:14:32.95:0,33,271	0/0:29,0:29:65.88:0,66,542	0/0:10,0:10:29.97:0,30,246
chr10	28900424	.	TA	T	364.95	PASS	AB=0.818;AC=5;AF=0.089;AN=56;BaseQRankSum=6.909;DP=425;FS=0.000;HRun=10;HaplotypeScore=53.9960;InbreedingCoeff=0.6978;MQ=69.44;MQ0=0;MQRankSum=-2.183;QD=12.16;ReadPosRankSum=-2.642;VQSLOD=2.3601;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:48.11:0,48,521	0/0:7,0:7:21.06:0,21,232	0/0:10,0:10:11.73:0,12,92	0/0:11,0:10:20.94:0,21,194	0/0:14,0:14:30.08:0,30,330	0/0:12,0:12:27.07:0,27,299	0/0:10,0:10:24.06:0,24,266	0/0:29,0:29:75.18:0,75,813	0/0:7,0:7:15.04:0,15,164	0/0:17,1:18:22.07:0,22,471	0/0:20,0:20:48.13:0,48,527	0/0:12,0:12:24.06:0,24,265	0/0:11,0:11:33.09:0,33,365	0/0:14,1:15:4.03:0,4,273	0/1:7,2:9:31.10:31,0,132	0/0:17,0:18:41.94:0,42,446	1/1:3,12:15:35.95:305,36,0	1/1:0,6:6:18:156,18,0	0/0:17,1:18:16.01:0,16,372	0/0:18,0:18:45.12:0,45,498	0/0:6,0:6:15.04:0,15,166	0/0:20,0:20:42.09:0,42,454	0/0:23,0:23:63.17:0,63,697	0/0:15,0:15:36.10:0,36,398	0/0:28,1:29:48.95:0,49,761	0/0:17,0:17:48.09:0,48,511	0/0:25,0:25:60.12:0,60,650	0/0:8,0:8:21.05:0,21,226
chr10	28900497	.	G	GTTT	5726.99	PASS	AB=0.568;AC=51;AF=0.911;AN=56;BaseQRankSum=-2.091;DP=490;FS=0.000;HRun=12;HaplotypeScore=84.5526;InbreedingCoeff=0.6960;MQ=69.09;MQ0=4;MQRankSum=-2.348;QD=12.45;ReadPosRankSum=2.106;VQSLOD=2.3525;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:10,0:41:3.44:364,0,3	1/1:4,0:8:7.22:49,7,0	0/0:13,0:10:11.82:0,12,105	0/0:16,0:12:7.16:0,7,37	1/1:3,1:18:41.43:326,41,0	1/1:3,1:13:18.70:155,19,0	1/1:3,0:17:29.89:228,30,0	1/1:16,0:33:53.72:457,54,0	1/1:0,1:14:23.29:189,23,0	1/1:5,1:15:22.19:198,22,0	1/1:4,4:10:11.98:124,12,0	1/1:2,0:17:22.16:163,22,0	1/1:2,0:11:13.22:109,13,0	1/1:1,0:15:14.95:115,15,0	1/1:1,13:15:24.08:434,24,0	1/1:5,1:20:29.72:273,30,0	1/1:12,0:16:26.33:234,26,0	1/1:7,0:12:22.91:212,23,0	1/1:12,1:23:16.31:202,16,0	1/1:5,0:21:38.42:313,38,0	1/1:1,0:11:16.19:117,16,0	1/1:2,0:26:42.52:267,43,0	1/1:3,0:10:20.81:165,21,0	1/1:6,2:24:29.91:262,30,0	1/1:4,0:16:17.43:120,17,0	1/1:5,1:15:35.79:304,36,0	1/1:2,1:23:32.10:266,32,0	1/1:1,0:9:13.95:83,14,0
chr10	28901826	.	A	AG	1228.50	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=9.331;DP=716;FS=6.617;HRun=1;HaplotypeScore=75.0693;InbreedingCoeff=0.8224;MQ=80.23;MQ0=1;MQRankSum=-4.114;QD=20.82;ReadPosRankSum=-0.531;VQSLOD=3.2768;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,114,1479	0/0:9,0:9:27.09:0,27,351	0/0:21,0:20:33.37:0,33,657	0/0:32,1:32:79.42:0,79,1018	0/0:35,0:35:99:0,105,1336	0/0:31,0:31:90.27:0,90,1143	0/1:27,0:27:5.30:5,0,830	0/0:22,0:22:66.21:0,66,857	0/0:33,0:33:93.27:0,93,1175	0/0:22,0:22:66.20:0,66,824	0/0:19,0:19:57.19:0,57,740	0/0:29,0:29:87.28:0,87,1130	0/0:22,0:22:63.18:0,63,791	0/0:20,0:20:60.14:0,60,745	0/0:38,0:38:99:0,108,1394	0/0:20,0:20:60.20:0,60,779	1/1:1,19:19:54.18:809,54,0	1/1:0,12:12:36.12:540,36,0	0/0:20,0:20:60.16:0,60,761	0/0:39,0:39:99:0,117,1492	0/0:45,0:45:99:0,132,1697	0/0:26,0:26:75.24:0,75,974	0/0:25,0:25:75.17:0,75,921	0/0:34,0:34:99:0,99,1285	0/0:15,0:15:45.13:0,45,570	0/0:23,0:23:66.20:0,66,843	0/0:26,0:26:78.23:0,78,984	0/0:10,0:10:30.08:0,30,374
chr10	28902005	.	A	AATCAGTTCG	1021.09	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=0.984;DP=540;FS=0.000;HRun=0;HaplotypeScore=145.2249;InbreedingCoeff=0.8877;MQ=66.05;MQ0=3;MQRankSum=-4.679;QD=44.40;ReadPosRankSum=-0.919;VQSLOD=2.7719;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,126,3642	0/0:10,0:10:30.09:0,30,810	0/0:19,0:16:45.12:0,45,1100	0/0:17,0:17:51.12:0,51,1290	0/0:18,0:18:51.16:0,51,1360	0/0:27,0:27:75.26:0,75,2163	0/0:22,0:20:3.63:0,4,1454	0/0:23,0:23:57.20:0,57,1608	0/0:19,0:19:57.19:0,57,1569	0/0:13,0:13:33.10:0,33,891	0/0:14,0:14:39.11:0,39,902	0/0:26,0:26:75.26:0,75,2226	0/0:19,0:19:57.20:0,57,1662	0/0:12,0:12:36.12:0,36,1091	0/0:23,0:23:69.24:0,69,2042	0/0:15,0:15:42.13:0,42,1169	1/1:8,7:12:18.06:866,18,0	1/1:5,1:4:9.03:267,9,0	0/0:20,0:20:54.17:0,54,1415	0/0:12,0:12:30.09:0,30,838	0/0:28,0:28:81.28:0,81,2323	0/0:21,0:21:63.22:0,63,1858	0/0:13,0:13:33.11:0,33,969	0/0:27,1:28:78.25:0,78,2271	0/0:22,0:22:66.20:0,66,1785	0/0:21,0:21:60.21:0,60,1738	0/0:22,0:22:66.21:0,66,1901	0/0:9,0:9:27.09:0,27,640
chr10	28902473	.	A	ATTCC	2272.40	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=2.053;DP=737;FS=4.452;HRun=0;HaplotypeScore=115.6015;InbreedingCoeff=0.9999;MQ=90.73;MQ0=0;MQRankSum=-5.639;QD=68.86;ReadPosRankSum=-0.442;VQSLOD=5.3641;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,111,2134	0/0:12,0:12:36.09:0,36,661	0/0:27,0:27:77.72:0,78,1359	0/0:31,0:31:85.82:0,86,1567	0/0:25,0:25:75.24:0,75,1420	0/0:33,0:33:99:0,99,1868	0/0:31,0:31:90.31:0,90,1725	0/0:27,0:27:75.21:0,75,1355	0/0:16,0:16:48.16:0,48,929	0/0:27,0:27:81.28:0,81,1564	0/0:26,0:26:75.24:0,75,1417	0/0:27,0:27:59.91:0,60,1422	0/0:35,0:35:99:0,99,1851	0/0:18,0:18:51.17:0,51,988	0/0:35,0:35:99:0,102,1941	0/0:33,0:33:93.28:0,93,1727	1/1:2,16:18:51.18:1340,51,0	1/1:5,10:15:39.13:1054,39,0	0/0:32,0:32:87.29:0,87,1638	0/0:18,0:18:54.17:0,54,1014	0/0:32,0:32:96.31:0,96,1816	0/0:31,0:31:87.24:0,87,1551	0/0:16,0:16:48.16:0,48,930	0/0:28,0:28:84.29:0,84,1619	0/0:29,0:29:75.23:0,75,1406	0/0:28,0:28:75.23:0,75,1376	0/0:35,0:34:99:0,105,2008	0/0:13,0:13:39.13:0,39,755
chr10	28903351	.	T	TACACAC	11626.74	PASS	AB=0.673;AC=48;AF=0.889;AN=54;BaseQRankSum=-3.592;DP=816;FS=7.576;HRun=0;HaplotypeScore=211.8761;InbreedingCoeff=0.5285;MQ=56.34;MQ0=7;MQRankSum=-4.045;QD=15.42;ReadPosRankSum=-4.286;VQSLOD=2.1562;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:29,10:45:27.08:533,27,0	1/1:4,7:11:9.03:289,9,0	0/0:36,0:22:2.98:0,3,21	0/0:23,0:19:2.96:0,3,19	1/1:22,9:36:24.08:634,24,0	1/1:13,4:28:27.09:606,27,0	1/1:24,2:29:12.04:314,12,0	1/1:24,0:24:13.58:143,14,0	1/1:17,10:31:24.55:595,25,0	1/1:19,9:34:47.43:1106,47,0	1/1:11,10:23:15.05:427,15,0	1/1:21,9:33:18.42:559,18,0	1/1:18,14:37:8.92:193,9,0	1/1:12,13:29:18.06:558,18,0	1/1:22,8:33:27.09:682,27,0	1/1:11,15:30:33.04:767,33,0	0/1:14,0:36:3.36:3,0,7	0/1:13,0:21:2.12:2,0,103	1/1:23,0:22:17.44:287,17,0	1/1:20,12:35:30.03:809,30,0	1/1:24,7:31:3.01:97,3,0	1/1:20,7:33:20.64:460,21,0	1/1:14,5:26:21.54:430,22,0	1/1:14,1:28:9.03:108,9,0	1/1:19,9:28:24.08:643,24,0	1/1:27,8:39:44.13:818,44,0	1/1:14,10:26:21.64:565,22,0	./.
chr10	28904784	.	C	CT	7264.03	PASS	AB=0.659;AC=45;AF=0.804;AN=56;BaseQRankSum=-5.080;DP=504;FS=1.235;HRun=12;HaplotypeScore=64.9725;InbreedingCoeff=-0.2623;MQ=65.04;MQ0=2;MQRankSum=0.640;QD=14.41;ReadPosRankSum=3.453;VQSLOD=5.5832;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:17,11:27:8.02:380,8,0	0/1:2,4:6:9.67:100,0,10	1/1:21,0:10:0.86:16,1,0	0/1:26,0:16:20.41:20,0,31	0/1:11,17:30:37.43:402,0,37	1/1:2,14:16:11.14:270,11,0	1/1:3,12:15:7.88:223,8,0	0/1:16,13:29:17.66:327,0,18	0/1:5,11:16:10.80:221,0,11	1/1:7,16:23:10.21:403,10,0	0/1:4,12:16:13.77:204,0,14	1/1:3,7:10:9.01:88,9,0	1/1:1,15:16:42.07:408,42,0	1/1:1,8:9:21.03:204,21,0	0/1:7,9:17:8.20:241,0,8	1/1:4,11:15:26.71:262,27,0	0/1:16,11:25:35.09:323,0,35	1/1:6,12:18:8.14:241,8,0	1/1:10,13:23:4.67:386,5,0	1/1:9,16:25:11.48:422,11,0	1/1:1,1:2:3:29,3,0	0/1:7,8:15:21.73:125,0,22	1/1:2,10:12:30.05:292,30,0	1/1:1,15:18:47.75:437,48,0	1/1:2,19:21:32.18:474,32,0	0/1:8,15:23:1.75:308,0,2	0/1:5,12:17:4.67:282,0,5	1/1:0,7:7:18.03:175,18,0
chr10	28906203	.	TA	T	11878.69	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-1.371;DP=443;FS=4.678;HRun=6;HaplotypeScore=94.5447;InbreedingCoeff=0.9007;MQ=60.41;MQ0=6;MQRankSum=-2.890;QD=28.15;ReadPosRankSum=3.646;VQSLOD=5.2612;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,23:26:66.12:695,66,0	1/1:0,3:3:6.02:64,6,0	0/0:7,0:5:11.63:0,12,128	0/0:14,0:8:17.13:0,17,134	1/1:3,27:30:81.18:854,81,0	1/1:3,13:15:42.10:445,42,0	1/1:1,8:9:27.07:290,27,0	1/1:1,25:26:75.13:779,75,0	1/1:3,14:17:45.11:483,45,0	1/1:0,17:17:51.13:547,51,0	1/1:0,19:19:57.02:583,57,0	1/1:4,8:12:33.04:331,33,0	1/1:0,11:11:33.08:353,33,0	1/1:1,7:8:21.05:225,21,0	1/1:2,13:15:36.08:386,36,0	1/1:3,18:21:63.13:659,63,0	1/1:6,20:25:60.11:632,60,0	1/1:5,9:13:30.05:312,30,0	1/1:7,16:23:57.13:601,57,0	1/1:3,16:19:54.08:554,54,0	1/1:0,6:6:15.04:161,15,0	1/1:0,6:6:18:181,18,0	1/1:1,13:14:39.06:406,39,0	1/1:1,7:8:18.04:193,18,0	1/1:0,26:26:78.20:836,78,0	1/1:4,12:15:39.09:413,39,0	1/1:6,22:28:69.15:732,69,0	1/1:1,5:5:15.04:161,15,0
chr10	28906565	.	A	AT	15399.95	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=1.296;DP=519;FS=1.037;HRun=7;HaplotypeScore=77.2298;InbreedingCoeff=0.8790;MQ=73.97;MQ0=0;MQRankSum=-3.879;QD=30.80;ReadPosRankSum=4.170;VQSLOD=4.9167;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,26:28:69.21:833,69,0	1/1:0,8:8:24.07:290,24,0	0/0:14,0:14:30.01:0,30,279	0/0:4,0:5:5.96:0,6,50	1/1:2,28:30:78.24:942,78,0	1/1:1,20:21:60.15:709,60,0	1/1:2,16:18:19.17:515,19,0	1/1:4,16:20:45.61:545,46,0	1/1:1,12:13:36.11:435,36,0	1/1:4,17:21:54.16:644,54,0	1/1:3,28:31:87.25:1039,87,0	1/1:1,13:14:33.10:399,33,0	1/1:2,18:20:51.15:611,51,0	1/1:2,19:21:54.17:652,54,0	1/1:2,19:21:31.21:660,31,0	1/1:3,15:18:45.14:544,45,0	1/1:1,13:14:33.10:398,33,0	1/1:3,5:8:15.05:181,15,0	1/1:3,18:21:53.32:649,53,0	1/1:1,28:29:78.24:942,78,0	1/1:1,10:11:27.08:326,27,0	1/1:3,19:22:51.16:616,51,0	1/1:0,20:20:60.18:725,60,0	1/1:2,10:12:30.09:362,30,0	1/1:4,25:29:69.21:833,69,0	1/1:3,18:21:54.16:648,54,0	1/1:5,22:26:69.21:829,69,0	1/1:0,2:2:6.02:72,6,0
chr10	28906727	.	CACA	C	22167.31	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=2.215;DP=731;FS=11.002;HRun=0;HaplotypeScore=108.3673;InbreedingCoeff=0.9661;MQ=72.52;MQ0=0;MQRankSum=-9.797;QD=32.74;ReadPosRankSum=5.983;VQSLOD=4.9301;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,56:59:93.21:1383,93,0	1/1:1,10:11:30.10:463,30,0	0/0:32,0:31:87.29:0,87,1719	0/0:22,0:21:45.10:0,45,854	1/1:1,18:19:42.10:596,42,0	1/1:1,23:24:57.19:903,57,0	1/1:2,23:25:45.15:712,45,0	1/1:8,33:41:96.30:1452,96,0	1/1:3,22:25:54.13:827,54,0	1/1:3,28:31:84.27:1296,84,0	1/1:3,23:26:60.15:877,60,0	1/1:2,15:17:36.12:560,36,0	1/1:3,30:33:75.26:1189,75,0	1/1:1,15:16:39.13:618,39,0	1/1:4,17:21:39.13:596,39,0	1/1:3,31:34:69.24:1092,69,0	1/1:2,30:32:66.17:1017,66,0	1/1:0,8:8:12.04:190,12,0	1/1:4,10:14:30.06:394,30,0	1/1:2,26:28:78.22:1159,78,0	1/1:4,58:62:99:1836,120,0	1/1:4,24:27:62.96:943,63,0	1/1:0,15:15:29.49:474,29,0	1/1:3,30:33:66.22:1046,66,0	1/1:1,14:15:20.74:332,21,0	1/1:3,21:23:60.20:938,60,0	1/1:0,27:26:69.23:1082,69,0	1/1:0,9:9:12.04:190,12,0
chr10	28907150	.	GA	G	12854.64	PASS	AB=0.790;AC=52;AF=0.929;AN=56;BaseQRankSum=-4.736;DP=624;FS=1.922;HRun=10;HaplotypeScore=85.2913;InbreedingCoeff=0.4401;MQ=73.35;MQ0=0;MQRankSum=-4.815;QD=21.11;ReadPosRankSum=4.326;VQSLOD=5.5077;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,14:16:41.99:365,42,0	1/1:3,12:15:35.99:312,36,0	0/0:14,1:15:5.76:0,6,193	0/1:11,1:13:6.95:7,0,117	1/1:2,35:37:95.96:833,96,0	1/1:3,17:20:41.98:365,42,0	1/1:2,16:18:41.99:365,42,0	1/1:4,28:33:85.97:726,86,0	1/1:4,24:28:68.97:598,69,0	1/1:3,23:27:71.02:605,71,0	1/1:2,23:25:65.97:573,66,0	1/1:1,16:17:38.99:339,39,0	1/1:1,18:20:56.03:475,56,0	1/1:2,10:12:26.99:234,27,0	1/1:5,25:30:71.98:625,72,0	1/1:1,21:22:59.99:521,60,0	1/1:3,22:25:59.98:521,60,0	1/1:3,23:26:62.97:547,63,0	1/1:3,21:24:32.79:508,33,0	1/1:4,35:39:98.97:859,99,0	0/1:7,8:15:34.72:245,0,35	1/1:1,29:30:80.98:703,81,0	1/1:3,18:21:53.99:469,54,0	1/1:1,6:7:18:156,18,0	1/1:1,25:26:65.98:573,66,0	1/1:4,29:34:82.99:706,83,0	1/1:4,19:23:53.98:469,54,0	1/1:0,6:6:18:156,18,0
chr10	28908049	.	ACACACACACG	A	1834.51	PASS	AB=0.996;AC=18;AF=0.321;AN=56;BaseQRankSum=-3.232;DP=626;FS=13.386;HRun=0;HaplotypeScore=181.9190;InbreedingCoeff=-0.1480;MQ=54.03;MQ0=11;MQRankSum=3.693;QD=5.66;ReadPosRankSum=-1.885;VQSLOD=1.6249;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:38,0:36:99:105,0,424	0/0:11,0:11:3.73:0,4,23	0/0:44,0:16:26.77:0,27,349	0/0:44,0:17:5.69:0,6,104	0/0:20,0:20:12.57:0,13,125	1/1:11,2:13:0.67:92,1,0	0/0:29,0:29:12.75:0,13,117	0/1:23,0:21:37.25:328,0,37	0/0:18,0:18:5.13:0,5,30	0/1:22,0:21:99:124,0,342	0/0:20,0:20:5.58:0,6,83	0/1:22,0:22:0.14:0,0,124	0/0:14,0:14:7.68:0,8,45	0/1:17,1:18:91.87:92,0,168	0/1:21,0:20:99:175,0,129	0/0:17,0:17:9:0,9,80	1/1:4,27:31:5.97:121,6,0	1/1:2,24:27:14.22:317,14,0	0/1:17,0:17:62.97:160,0,63	0/0:18,0:18:3.88:0,4,27	0/1:34,0:34:86.81:157,0,87	0/1:14,0:14:18.07:18,0,20	0/0:20,0:20:4.49:0,4,30	0/0:22,0:22:2.83:0,3,18	0/1:16,0:16:99:120,0,229	0/1:21,0:21:99:162,0,210	0/0:25,0:25:11.49:0,11,125	0/1:7,0:7:18.92:19,0,33
chr10	28908051	.	ACACACACG	A	3156.75	PASS	AB=0.994;AC=36;AF=0.643;AN=56;BaseQRankSum=0.567;DP=626;FS=2.678;HRun=0;HaplotypeScore=167.8961;InbreedingCoeff=-0.0816;MQ=54.53;MQ0=12;MQRankSum=2.104;QD=6.31;ReadPosRankSum=4.364;VQSLOD=2.6057;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:36,1:35:50.50:223,0,51	1/1:11,0:11:5.48:47,5,0	0/0:44,0:16:27.79:0,28,307	0/0:45,0:17:8.03:0,8,117	0/1:22,0:22:12.77:18,0,13	1/1:14,0:14:9:112,9,0	0/1:29,0:29:23.79:24,0,25	1/1:22,0:20:10.13:471,10,0	1/1:17,0:17:5.98:47,6,0	0/1:22,0:21:86.63:249,0,87	0/0:19,0:19:2.40:0,2,14	0/1:22,0:22:32.87:33,0,36	1/1:15,0:15:8.61:57,9,0	0/1:18,0:18:31.44:163,0,31	1/1:20,2:21:19.09:359,19,0	0/0:17,1:18:2.22:0,2,7	1/1:31,0:31:6:88,6,0	0/1:27,0:27:4.03:196,0,4	0/1:15,0:15:2.40:249,0,2	1/1:17,0:17:2.99:24,3,0	1/1:33,0:33:34.13:287,34,0	1/1:14,0:14:5.99:49,6,0	1/1:21,1:22:6.64:43,7,0	1/1:22,0:22:3.46:25,3,0	0/1:16,0:16:40.01:140,0,40	0/1:19,1:20:26.91:339,0,27	0/1:25,0:25:25.18:55,0,25	0/1:7,0:7:7.66:20,0,8
chr10	28908053	.	ACACACG	A	5236.60	PASS	AB=0.687;AC=49;AF=0.875;AN=56;BaseQRankSum=0.539;DP=615;FS=6.501;HRun=0;HaplotypeScore=149.3505;InbreedingCoeff=0.2479;MQ=54.82;MQ0=12;MQRankSum=3.105;QD=9.97;ReadPosRankSum=3.618;VQSLOD=3.5155;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:35,2:35:41.91:417,42,0	1/1:1,10:11:3.35:69,3,0	0/0:45,0:17:31.59:0,32,296	0/0:45,0:17:3.83:0,4,111	1/1:4,18:22:8.93:110,9,0	1/1:3,11:14:9.03:187,9,0	0/1:4,24:28:5.49:132,0,5	1/1:23,0:21:38.59:463,39,0	1/1:2,15:17:6.02:136,6,0	1/1:8,14:21:33.49:352,33,0	1/1:5,14:19:2.74:12,3,0	1/1:4,17:21:5.88:67,6,0	1/1:1,14:15:8.80:191,9,0	1/1:14,4:18:24.75:240,25,0	1/1:19,2:21:44.98:442,45,0	1/1:3,15:18:3.01:38,3,0	1/1:28,0:28:6:74,6,0	0/1:27,0:27:9.27:154,0,9	1/1:14,0:14:18.92:334,19,0	1/1:3,14:17:3.01:69,3,0	1/1:31,0:31:44.58:403,45,0	1/1:2,12:14:6.01:94,6,0	0/1:2,20:22:7.59:63,0,8	1/1:2,19:21:3.29:24,3,0	1/1:14,1:15:29.47:245,29,0	1/1:14,5:19:38.96:578,39,0	1/1:2,22:24:15.55:260,16,0	1/1:2,5:7:5.75:81,6,0
chr10	28908057	.	ACG	A	3770.83	PASS	AB=1.000;AC=50;AF=0.893;AN=56;BaseQRankSum=2.082;DP=597;FS=0.000;HRun=0;HaplotypeScore=132.9887;InbreedingCoeff=0.3569;MQ=56.05;MQ0=12;MQRankSum=2.228;QD=7.51;ReadPosRankSum=5.412;VQSLOD=2.6071;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:33,0:34:53.46:414,53,0	1/1:11,0:11:2.85:22,3,0	0/0:49,0:24:42.19:0,42,399	0/0:46,0:21:11.01:0,11,176	1/1:20,0:20:8.90:63,9,0	1/1:14,0:14:8.95:66,9,0	0/1:26,0:26:23.83:31,0,24	1/1:25,0:23:35.92:501,36,0	1/1:15,0:15:5.97:44,6,0	1/1:19,0:18:29.43:230,29,0	1/1:18,0:19:2.99:25,3,0	1/1:21,0:21:5.46:35,5,0	1/1:14,0:14:8.94:65,9,0	1/1:16,0:16:26.73:219,27,0	1/1:20,0:20:41.93:343,42,0	1/1:16,0:16:0.47:1,0,0	1/1:27,0:27:5.98:46,6,0	1/1:25,0:25:14.90:108,15,0	1/1:0,14:16:24.89:344,25,0	1/1:14,0:14:2.98:22,3,0	1/1:31,0:31:47.86:383,48,0	1/1:13,0:13:5.98:47,6,0	0/1:22,0:22:13.66:17,0,14	1/1:21,0:21:2.73:24,3,0	1/1:14,0:14:29.76:237,30,0	1/1:17,0:17:43.70:350,44,0	1/1:24,0:24:11.05:88,11,0	1/1:6,0:6:5.98:47,6,0
chr10	28908063	.	ACTCGGT	A	137.44	PASS	AB=0.990;AC=13;AF=0.232;AN=56;BaseQRankSum=6.013;DP=610;FS=58.521;HRun=0;HaplotypeScore=165.2235;InbreedingCoeff=-0.1851;MQ=58.23;MQ0=10;MQRankSum=-3.602;QD=0.67;ReadPosRankSum=3.384;VQSLOD=1.0242;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,1:34:46.76:0,47,1633	1/1:10,0:10:1.55:5,2,0	0/0:54,0:29:58.73:0,59,2373	0/0:52,0:26:47.36:0,47,1156	0/0:22,1:23:37.37:0,37,837	0/1:15,1:16:5.15:5,0,195	0/1:26,0:26:11.75:12,0,63	0/0:21,0:20:57.19:0,57,1334	0/1:16,0:16:17.50:17,0,95	0/1:17,0:16:34.36:34,0,613	0/0:17,1:18:5.61:0,6,138	0/0:18,0:18:1.33:0,1,5	0/1:15,0:15:46.60:47,0,93	0/0:16,0:16:27.98:0,28,709	0/0:18,0:18:41.27:0,41,863	0/0:18,0:18:6.02:0,6,196	0/0:27,0:27:5.99:0,6,87	0/0:25,0:25:11.59:0,12,134	0/1:17,1:18:13.15:13,0,1065	0/0:16,0:16:19.31:0,19,421	0/0:29,0:29:49.79:0,50,1152	0/1:14,0:14:35.76:36,0,256	0/1:23,0:23:12.61:13,0,162	0/0:21,0:21:9.02:0,9,165	0/0:13,0:13:33.11:0,33,869	0/1:18,0:18:57.07:57,0,931	0/1:24,0:24:15.76:16,0,122	0/1:9,0:9:25.73:26,0,262
chr10	28908988	.	GTGTGTT	G	2241.07	PASS	AB=1.000;AC=28;AF=0.500;AN=56;BaseQRankSum=-7.960;DP=553;FS=3.976;HRun=0;HaplotypeScore=160.4006;InbreedingCoeff=-0.5964;MQ=53.84;MQ0=10;MQRankSum=3.927;QD=4.69;ReadPosRankSum=-3.045;VQSLOD=2.1516;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:42,0:40:99:148,0,308	0/1:7,0:7:40.87:41,0,47	0/0:31,0:16:47.94:0,48,490	0/0:28,0:12:29.28:0,29,328	0/1:7,0:7:17.52:18,0,36	0/1:28,0:28:78.13:78,0,119	0/1:26,0:26:99:170,0,207	0/1:22,0:22:99:200,0,512	0/0:15,0:15:5.14:0,5,223	0/1:17,0:17:61.45:61,0,655	0/1:16,0:15:74.08:127,0,74	1/1:21,0:21:12.26:89,12,0	0/1:16,0:16:41.48:41,0,227	0/1:21,0:20:75.75:76,0,120	0/1:25,0:24:84.84:85,0,460	0/1:25,0:25:99:144,0,508	1/1:2,15:17:4.72:144,5,0	1/1:8,2:10:10.48:233,10,0	0/1:17,0:16:99:105,0,477	0/1:11,0:11:4.98:5,0,277	0/1:23,0:23:49.91:50,0,330	0/1:22,0:21:40.26:161,0,40	0/1:18,0:18:93.88:94,0,238	0/1:24,0:24:99:140,0,151	0/1:22,0:21:52.05:52,0,276	0/1:15,0:15:16.49:16,0,558	0/1:20,0:20:75.69:76,0,455	0/1:6,0:6:48.83:49,0,165
chr10	28908994	.	T	TGTGTGTGTGTGTG	4198.31	PASS	AB=0.979;AC=28;AF=0.500;AN=56;BaseQRankSum=-3.854;DP=423;FS=3.371;HRun=0;HaplotypeScore=167.6158;InbreedingCoeff=-0.5046;MQ=66.47;MQ0=8;MQRankSum=-1.939;QD=12.06;ReadPosRankSum=-7.122;VQSLOD=0.3716;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:34,1:34:99:248,0,114	0/1:7,0:7:1.41:70,0,1	0/0:34,0:20:57:0,57,780	0/0:26,0:13:39.05:0,39,575	1/1:5,0:5:5.98:48,6,0	0/1:15,0:15:35.78:40,0,36	0/1:21,0:21:86.39:233,0,86	0/1:20,0:20:98.64:105,0,99	1/1:6,1:7:11.13:340,11,0	0/1:10,0:10:37.66:161,0,38	0/1:12,0:12:2.10:152,0,2	0/1:12,0:12:7.40:106,0,7	0/1:8,0:8:18.13:61,0,18	0/1:11,1:12:10.72:351,0,11	0/1:14,1:15:11.45:287,0,11	0/1:14,0:17:19.19:492,0,19	0/0:15,0:15:6.02:0,6,165	0/1:10,0:10:42.64:43,0,194	0/1:15,0:15:48.41:350,0,48	1/1:10,1:11:9.73:299,10,0	0/1:24,0:24:57.60:106,0,58	0/1:14,0:14:46.39:70,0,46	0/1:12,0:12:34.99:74,0,35	0/1:19,0:19:33.89:60,0,34	0/1:10,1:11:5.61:266,0,6	0/1:13,0:13:74.41:77,0,74	0/1:17,0:17:91.32:155,0,91	0/1:5,0:5:6.37:6,0,36
chr10	28910713	.	G	GAACATGTTATTTGTAACATGTTATAAATA	95734.29	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-4.741;DP=712;FS=2.355;HRun=0;HaplotypeScore=359.4921;InbreedingCoeff=0.9771;MQ=74.26;MQ0=0;MQRankSum=-9.417;QD=143.31;ReadPosRankSum=4.055;VQSLOD=3.9866;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,1:26:30.10:2620,30,0	1/1:7,0:7:18.06:1280,18,0	0/0:21,0:21:51.17:0,51,1868	0/0:23,0:23:44.13:0,44,1090	1/1:18,4:36:54.15:3912,54,0	1/1:13,3:25:39.13:3998,39,0	1/1:27,0:27:66.23:5159,66,0	1/1:49,0:49:99:7984,132,0	1/1:10,1:22:20.80:2354,21,0	1/1:36,0:36:99:6242,102,0	1/1:9,1:25:24.55:1765,25,0	1/1:26,0:26:69.24:5617,69,0	1/1:7,1:27:21.07:2319,21,0	1/1:7,4:25:30.10:2774,30,0	1/1:18,3:32:60.21:5862,60,0	1/1:12,3:28:39.13:4596,39,0	1/1:15,0:15:36.06:2453,36,0	1/1:13,0:13:30.06:1817,30,0	1/1:12,2:23:60.68:5272,61,0	1/1:21,2:43:69.13:5223,69,0	1/1:17,0:17:33.03:1978,33,0	1/1:12,2:31:48.12:3064,48,0	1/1:4,2:17:18.06:1570,18,0	1/1:14,0:14:30.06:2143,30,0	1/1:13,2:28:36.59:3226,37,0	1/1:19,1:36:84.29:8040,84,0	1/1:11,0:24:30.57:2704,31,0	1/1:5,2:16:15.05:1761,15,0
chr10	28910729	.	A	AC	2177.54	PASS	AB=0.759;AC=9;AF=0.161;AN=56;BaseQRankSum=8.513;DP=526;FS=35.818;HRun=0;HaplotypeScore=123.6021;InbreedingCoeff=-0.1914;MQ=75.94;MQ0=0;MQRankSum=-8.621;QD=10.62;ReadPosRankSum=-2.526;VQSLOD=1.4885;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:36.09:0,36,471	0/1:2,5:7:71.76:83,0,72	0/0:18,0:18:51.16:0,51,669	0/0:18,0:18:51.16:0,51,669	0/1:25,0:25:13.35:13,0,755	0/0:15,0:15:39.11:0,39,503	0/1:18,9:27:99:196,0,586	0/1:25,24:49:99:1000,0,859	0/0:16,0:16:36.07:0,36,464	0/1:18,14:32:99:564,0,580	0/0:15,0:15:42.12:0,42,571	0/1:16,10:26:99:312,0,537	0/0:13,0:13:33.07:0,33,425	0/0:13,0:13:36.09:0,36,443	0/0:24,0:24:66.20:0,66,877	0/0:17,0:17:48.13:0,48,611	0/1:10,3:13:22.38:22,0,307	0/1:10,2:12:59.48:59,0,289	0/0:15,0:15:45.10:0,45,567	0/0:32,0:32:21.01:0,21,1108	0/1:9,5:14:67.51:68,0,245	0/0:21,0:21:29.96:0,30,773	0/0:11,0:11:30.08:0,30,386	0/0:10,6:16:24.87:0,25,277	0/0:16,0:16:45.14:0,45,600	0/0:23,0:23:69.17:0,69,913	0/0:17,0:17:48.16:0,48,666	0/0:7,0:7:15.04:0,15,183
chr10	28911505	.	ATG	A	572.23	PASS	AB=0.891;AC=20;AF=0.435;AN=46;BaseQRankSum=-4.074;DP=287;FS=0.799;HRun=0;HaplotypeScore=83.6438;InbreedingCoeff=-0.0899;MQ=48.72;MQ0=10;MQRankSum=1.897;QD=2.89;ReadPosRankSum=-2.612;VQSLOD=1.6453;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:4,0:4:3:0,3,29	./.	0/1:32,0:6:0.78:1,0,1	0/0:11,0:11:0.99:0,1,5	0/1:14,1:16:9.37:82,0,9	0/1:5,0:4:0.21:0,0,0	0/1:16,0:29:66.98:67,0,293	0/0:8,0:8:0:0,0,0	1/1:9,0:9:0.99:55,1,0	0/1:8,0:8:9.87:10,0,42	0/0:4,0:4:5.73:0,6,34	0/0:5,0:5:0:0,0,0	1/1:7,0:7:3:25,3,0	0/0:8,1:9:5.28:0,5,24	0/1:10,0:10:4.35:19,0,4	0/1:3,5:8:1.16:37,0,1	0/1:3,9:12:21.68:147,0,22	0/1:12,0:12:17.97:18,0,100	1/1:6,0:5:2.99:24,3,0	0/1:7,0:7:0:0,0,0	./.	./.	./.	0/0:9,0:9:5.34:0,5,22	0/1:13,0:13:17.67:71,0,18	0/1:16,1:16:10.63:107,0,11	1/1:4,1:5:3:25,3,0
chr10	28914885	.	G	GAGCCAAAGGGGAT	79896.56	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-8.505;DP=755;FS=2.478;HRun=0;HaplotypeScore=185.3285;InbreedingCoeff=0.9682;MQ=78.87;MQ0=0;MQRankSum=-11.878;QD=114.79;ReadPosRankSum=4.158;VQSLOD=5.1718;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,17:36:66.23:4168,66,0	1/1:6,1:13:18.06:949,18,0	0/0:30,0:30:80.52:0,81,2184	0/0:29,0:28:74.10:0,74,2457	1/1:6,12:27:50.66:2177,51,0	1/1:7,9:28:39.13:2264,39,0	1/1:9,12:32:60.21:3720,60,0	1/1:16,3:40:99:5012,111,0	1/1:6,12:25:56.95:3368,57,0	1/1:12,10:32:84.29:4359,84,0	1/1:8,5:21:30.10:1609,30,0	1/1:7,20:37:69.24:4421,69,0	1/1:7,21:35:81.28:5068,81,0	1/1:6,11:21:48.16:3017,48,0	1/1:9,13:33:60.21:3750,60,0	1/1:3,14:31:48.16:3052,48,0	1/1:8,9:26:45.15:2842,45,0	1/1:3,2:11:15.05:913,15,0	1/1:8,5:28:81.23:3397,81,0	1/1:4,16:34:72.12:3865,72,0	1/1:11,4:23:36.12:2249,36,0	1/1:2,13:20:45.15:2686,45,0	1/1:5,17:28:62.81:3809,63,0	1/1:4,7:23:18.06:1019,18,0	1/1:3,10:20:39.13:2445,39,0	1/1:7,13:29:81.25:4217,81,0	1/1:9,18:35:75.26:4730,75,0	1/1:1,4:7:12.04:790,12,0
chr10	28915529	.	GT	G	4952.56	PASS	AB=1.000;AC=49;AF=0.875;AN=56;BaseQRankSum=7.330;DP=593;FS=17.965;HRun=1;HaplotypeScore=105.0182;InbreedingCoeff=-0.1543;MQ=82.33;MQ0=0;MQRankSum=-4.291;QD=8.35;ReadPosRankSum=10.637;VQSLOD=-0.3786;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:19:21:159,21,0	1/1:18,0:18:38.38:150,38,0	0/1:19,0:19:28.65:29,0,164	0/1:17,0:17:35.72:36,0,91	1/1:19,2:21:26.19:215,26,0	1/1:18,1:19:21.90:133,22,0	0/1:26,0:26:0.35:135,0,0	0/1:29,0:29:81.06:81,0,93	1/1:14,0:14:28.83:118,29,0	1/1:14,0:14:33.84:189,34,0	1/1:16,1:17:15.37:168,15,0	0/1:22,0:22:19.59:102,0,20	0/1:25,0:25:12.66:167,0,13	1/1:20,0:20:3.46:146,3,0	1/1:25,0:25:39.56:252,40,0	1/1:20,0:20:26.93:172,27,0	1/1:27,0:27:0.24:170,0,0	1/1:13,0:13:8.83:93,9,0	1/1:31,0:31:16.20:285,16,0	1/1:26,1:27:75.44:445,75,0	1/1:22,0:22:53.59:204,54,0	0/1:21,0:21:23.51:147,0,24	1/1:18,3:21:28.77:310,29,0	1/1:19,1:20:52.74:235,53,0	1/1:16,1:17:32.73:180,33,0	1/1:25,0:25:11.84:205,12,0	1/1:32,0:32:54.98:301,55,0	1/1:12,0:12:29.44:126,29,0
chr10	28917574	.	GCACACACACACACA	G	5238.32	PASS	AB=0.770;AC=33;AF=0.688;AN=48;BaseQRankSum=1.056;DP=367;FS=2.315;HRun=0;HaplotypeScore=168.7494;InbreedingCoeff=-0.1487;MQ=47.94;MQ0=7;MQRankSum=0.863;QD=18.38;ReadPosRankSum=5.396;VQSLOD=3.6778;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:15,8:23:99:113,0,117	1/1:1,3:4:2.99:24,3,0	0/0:18,0:11:5.38:0,5,73	0/0:16,0:4:3.01:0,3,116	0/1:14,10:24:0:0,0,0	1/1:6,10:16:3.01:119,3,0	0/0:3,4:7:0:0,0,0	0/1:33,0:32:99:135,0,782	1/1:3,3:6:6.02:169,6,0	0/1:5,6:12:64.49:762,0,64	./.	./.	1/1:5,1:6:3.01:71,3,0	1/1:6,4:10:3.01:119,3,0	1/1:2,12:15:3.01:119,3,0	1/1:1,6:7:6.02:208,6,0	0/1:8,8:16:43.45:733,0,43	0/1:7,1:7:99:119,0,180	0/1:12,2:14:99:110,0,179	1/1:5,7:12:3.48:119,3,0	1/1:8,0:8:3.01:50,3,0	1/1:3,4:8:2.87:100,3,0	1/1:8,8:17:6.01:75,6,0	./.	./.	0/1:7,11:18:99:1094,0,272	1/1:11,6:18:12.65:699,13,0	0/1:7,2:8:50.80:301,0,51
chr10	28917633	.	T	TACACACACACAC	4559.79	PASS	AB=0.831;AC=36;AF=0.720;AN=50;BaseQRankSum=-2.965;DP=485;FS=10.232;HRun=0;HaplotypeScore=209.8684;InbreedingCoeff=0.3637;MQ=31.63;MQ0=4;MQRankSum=1.328;QD=13.53;ReadPosRankSum=2.147;VQSLOD=2.8988;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:19:3.10:41,3,0	1/1:3,1:5:3.01:107,3,0	0/0:17,0:4:2.99:0,3,23	./.	0/0:14,0:16:1.72:0,2,4	1/1:25,0:25:6.54:140,7,0	1/1:11,0:11:3.01:120,3,0	1/1:16,0:16:24.07:437,24,0	1/1:12,4:17:9.01:252,9,0	1/1:18,6:26:25.33:1001,25,0	1/1:23,0:24:0.47:1,0,0	0/0:10,2:12:0.81:0,1,2	1/1:12,3:17:9.50:237,10,0	1/1:14,2:17:3.01:56,3,0	0/0:22,1:23:0.89:0,1,2	1/1:14,6:23:6.02:351,6,0	1/1:7,4:17:6.02:167,6,0	0/1:5,1:6:9.38:204,0,9	1/1:13,0:13:9.03:173,9,0	0/1:20,1:23:0:0,0,0	./.	1/1:15,3:23:0.01:0,0,0	0/0:9,4:13:0.47:0,0,1	./.	0/0:21,2:25:0.47:0,0,1	1/1:22,1:23:21.07:677,21,0	1/1:14,4:22:15.91:375,16,0	1/1:3,1:4:8.99:220,9,0
chr10	28919446	.	CA	C	9459.09	PASS	AB=1.000;AC=52;AF=0.929;AN=56;BaseQRankSum=5.836;DP=1016;FS=3.472;HRun=2;HaplotypeScore=183.1837;InbreedingCoeff=-0.0690;MQ=70.43;MQ0=0;MQRankSum=-3.945;QD=9.31;ReadPosRankSum=10.855;VQSLOD=1.4949;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:35,2:37:43.84:379,44,0	0/1:16,0:16:73.12:73,0,73	0/1:14,0:14:8.39:31,0,8	0/1:12,0:12:27.53:38,0,28	1/1:23,0:23:40.19:252,40,0	1/1:40,0:40:41.24:331,41,0	1/1:62,0:62:98.08:561,98,0	1/1:28,1:29:40.29:214,40,0	1/1:71,0:71:99:802,184,0	1/1:26,0:26:51.66:226,52,0	0/1:20,0:20:4.43:132,0,4	1/1:29,0:29:15.81:220,16,0	1/1:46,1:47:99:516,114,0	1/1:27,0:27:55.41:229,55,0	1/1:34,0:34:81.55:335,82,0	1/1:46,0:46:55.92:364,56,0	1/1:18,0:18:45.03:185,45,0	1/1:12,0:12:28.87:116,29,0	1/1:28,0:28:67.58:263,68,0	1/1:50,0:50:33.50:430,34,0	1/1:70,0:70:99:707,147,0	1/1:56,2:58:96.90:612,97,0	1/1:21,0:21:54.47:257,54,0	1/1:40,0:40:24.50:328,25,0	1/1:24,0:24:53.24:233,53,0	1/1:74,0:74:99:621,103,0	1/1:70,0:70:99:778,146,0	1/1:18,0:18:49.39:225,49,0
chr10	28923647	.	GTGTT	G	7960.54	PASS	AB=0.993;AC=32;AF=0.571;AN=56;BaseQRankSum=-15.308;DP=902;FS=0.687;HRun=0;HaplotypeScore=223.4468;InbreedingCoeff=-0.4859;MQ=61.92;MQ0=4;MQRankSum=2.684;QD=9.64;ReadPosRankSum=-1.159;VQSLOD=3.8952;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:31,0:31:46.99:181,0,47	1/1:17,0:17:27.13:252,27,0	0/0:39,0:25:45.46:0,45,541	0/0:37,0:22:25.31:0,25,383	0/1:25,0:25:54.75:139,0,55	1/1:39,1:39:54.70:494,55,0	1/1:53,0:54:0.37:582,0,0	0/1:34,0:33:99:407,0,106	0/1:49,0:49:54.58:485,0,55	0/1:27,0:27:88.16:198,0,88	0/1:13,0:12:21.26:133,0,21	0/1:19,0:19:99:196,0,118	0/1:41,0:41:99:368,0,114	0/1:24,0:24:99:142,0,127	0/1:34,0:34:68.44:68,0,258	0/1:18,0:18:99:103,0,131	0/1:25,0:25:63.47:242,0,63	0/1:19,0:19:99:186,0,140	1/1:28,0:28:28.47:362,28,0	0/1:32,2:34:79.51:342,0,80	1/1:82,3:85:84.83:1004,85,0	0/1:40,3:43:11.52:560,0,12	0/1:19,0:19:34.75:128,0,35	0/1:25,0:25:99:185,0,151	0/1:30,0:30:95.48:256,0,95	0/1:40,0:40:64.12:386,0,64	0/1:44,1:43:34.23:433,0,34	1/1:6,1:7:11.98:127,12,0
chr10	28923649	.	GTT	G	12893.64	PASS	AB=0.962;AC=51;AF=0.911;AN=56;BaseQRankSum=-3.221;DP=899;FS=28.200;HRun=3;HaplotypeScore=181.2082;InbreedingCoeff=0.7585;MQ=59.73;MQ0=4;MQRankSum=2.062;QD=15.65;ReadPosRankSum=-1.049;VQSLOD=0.2526;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:31,0:31:41.27:294,41,0	1/1:17,0:17:37.76:282,38,0	0/0:39,0:24:45.39:0,45,507	0/0:36,0:19:26.24:0,26,371	0/1:24,1:25:10.96:164,0,11	1/1:35,5:39:79.93:728,80,0	1/1:52,5:57:99:992,114,0	1/1:32,0:31:68.95:530,69,0	1/1:46,6:52:99:977,109,0	1/1:27,0:27:64.20:464,64,0	1/1:14,0:13:21.08:139,21,0	1/1:19,0:19:22.83:235,23,0	1/1:39,0:39:84.92:578,85,0	1/1:22,1:23:41.33:290,41,0	1/1:35,0:35:53.28:374,53,0	1/1:18,1:19:30.56:242,31,0	1/1:25,0:25:20.02:267,20,0	1/1:19,0:19:7.93:222,8,0	1/1:26,0:26:70.58:559,71,0	1/1:33,2:35:83.35:761,83,0	1/1:80,5:85:99:1352,155,0	1/1:40,1:41:72.86:735,73,0	1/1:19,1:20:29.66:219,30,0	1/1:25,1:26:44.12:317,44,0	1/1:27,1:28:51.86:475,52,0	1/1:36,3:39:77.25:798,77,0	1/1:38,5:41:95.17:785,95,0	1/1:7,0:7:14.96:117,15,0
chr10	28923683	.	G	GAA	10469.23	PASS	AB=0.663;AC=38;AF=0.679;AN=56;BaseQRankSum=7.967;DP=740;FS=8.553;HRun=0;HaplotypeScore=153.7027;InbreedingCoeff=-0.1554;MQ=65.59;MQ0=6;MQRankSum=-5.086;QD=15.65;ReadPosRankSum=-0.699;VQSLOD=3.8537;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,24:27:24.04:377,24,0	1/1:12,0:12:23.66:327,24,0	0/0:35,0:23:62.21:0,62,904	0/0:36,0:15:4.76:0,5,400	0/1:5,2:26:10.79:172,0,11	0/1:19,15:35:49.06:49,0,544	0/1:28,16:45:99:139,0,869	1/1:1,18:18:51.15:776,51,0	0/1:19,20:40:99:452,0,513	1/1:0,14:15:40.02:650,40,0	1/1:1,9:12:11.40:167,11,0	1/1:2,10:12:17.54:313,18,0	0/1:8,21:31:99:591,0,206	1/1:3,19:23:36.59:578,37,0	1/1:0,31:31:60.20:1064,60,0	1/1:3,12:16:27.05:476,27,0	0/1:4,0:23:15.46:66,0,15	0/1:4,10:14:1.22:128,0,1	0/1:13,10:26:99:437,0,431	0/1:19,18:37:99:570,0,613	0/1:25,21:52:99:179,0,566	0/1:14,18:33:99:330,0,388	1/1:4,16:20:20.73:337,21,0	1/1:1,21:22:24.08:470,24,0	1/1:4,10:14:35.15:539,35,0	0/1:18,17:37:99:726,0,540	0/1:15,15:29:99:280,0,399	0/1:16,0:16:99:277,0,272
chr10	28924661	.	GCTCTCTCTCTCTCT	G	1891.07	PASS	AB=0.916;AC=30;AF=0.714;AN=42;BaseQRankSum=3.501;DP=605;FS=13.893;HRun=0;HaplotypeScore=205.1691;InbreedingCoeff=0.4183;MQ=68.42;MQ0=30;MQRankSum=-2.415;QD=5.50;ReadPosRankSum=1.543;VQSLOD=1.9046;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:43,0:45:0:0,0,0	1/1:5,0:8:6.02:199,6,0	1/1:34,0:16:1.55:4,2,0	0/0:52,0:30:0.47:0,0,1	./.	1/1:13,8:21:2.17:110,2,0	1/1:26,2:26:2.80:13,3,0	0/0:20,0:19:3.86:0,4,23	1/1:16,4:21:3.01:110,3,0	1/1:12,7:18:14.68:486,15,0	1/1:11,0:12:0.47:1,0,0	1/1:9,1:11:3.01:114,3,0	1/1:25,0:25:2.35:92,2,0	./.	1/1:24,0:24:6.02:195,6,0	1/1:5,0:11:3.01:104,3,0	0/0:29,0:27:36.09:0,36,747	0/0:14,0:16:15.04:0,15,348	1/1:15,1:14:1.98:114,2,0	./.	./.	0/1:22,0:25:0:0,0,0	0/0:7,0:7:3.01:0,3,132	./.	./.	1/1:15,4:18:8.57:356,9,0	1/1:22,0:23:3.01:112,3,0	./.
chr10	28924692	.	CTCTCTCTCTCTCTCTCTCTCTCTG	C	1101.28	PASS	AB=1.000;AC=18;AF=0.321;AN=56;BaseQRankSum=3.284;DP=634;FS=0.661;HRun=0;HaplotypeScore=230.0552;InbreedingCoeff=-0.2381;MQ=46.10;MQ0=54;MQRankSum=-0.380;QD=3.05;ReadPosRankSum=-1.761;VQSLOD=2.1157;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:61,0:59:15.02:0,15,318	1/1:7,5:10:5.90:336,6,0	0/0:7,0:3:8.96:0,9,120	0/0:17,0:5:8.96:0,9,70	0/0:22,0:21:3.20:0,3,499	0/1:20,0:20:13.70:14,0,408	0/1:36,0:33:6.75:7,0,502	0/0:10,0:9:17.98:0,18,397	0/1:16,0:16:51.36:51,0,281	0/1:24,0:22:29.86:30,0,630	0/1:20,0:20:7.42:7,0,203	0/1:13,0:12:8.95:9,0,222	0/1:23,0:22:13.94:121,0,14	0/1:10,0:9:11.99:18,0,12	0/1:35,0:32:48:268,0,48	0/1:16,0:16:7.44:238,0,7	0/1:39,0:34:13.98:14,0,2942	0/0:20,0:17:32.59:0,33,1556	0/1:15,0:12:5.62:6,0,312	0/0:27,0:25:13.50:0,14,291	0/0:35,0:27:26.16:0,26,365	0/0:22,0:22:6:0,6,74	0/1:13,0:10:99:105,0,211	0/1:41,0:38:10.91:11,0,18	0/0:24,0:22:15.47:0,15,185	0/1:21,0:19:3.13:3,0,623	0/0:28,0:27:24.58:0,25,392	0/1:7,0:3:1.02:18,0,1
chr10	28924694	.	CTCTCTCTCTCTCTCTCTCTCTG	C	1792.99	PASS	AB=1.000;AC=25;AF=0.463;AN=54;BaseQRankSum=3.191;DP=612;FS=3.003;HRun=0;HaplotypeScore=204.7144;InbreedingCoeff=-0.0478;MQ=45.85;MQ0=55;MQRankSum=-0.174;QD=4.69;ReadPosRankSum=0.367;VQSLOD=2.6851;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:59,0:57:12.02:0,12,200	1/1:12,0:10:5.57:321,6,0	0/0:4,0:2:3.01:0,3,42	./.	0/0:20,0:19:0.19:0,0,341	0/1:19,0:19:35.01:35,0,278	0/1:35,0:32:32.74:33,0,362	0/0:12,0:10:15.04:0,15,268	0/1:16,0:16:75.30:75,0,147	0/1:23,0:21:99:179,0,301	0/1:20,0:20:13.18:13,0,97	0/1:14,0:13:37.35:37,0,104	1/1:9,14:22:2.01:145,2,0	1/1:10,0:9:3.01:48,3,0	1/1:12,22:31:6.85:371,7,0	1/1:16,0:16:17.99:290,18,0	0/1:39,0:34:12.30:12,0,2413	0/0:20,0:17:13.08:0,13,1300	0/1:14,0:11:52.36:52,0,171	0/1:28,0:26:4.56:5,0,164	0/0:30,0:22:11.90:0,12,175	0/0:22,0:22:3:0,3,25	0/1:12,0:9:99:154,0,170	1/1:15,25:37:2.92:17,3,0	0/0:23,0:21:15.46:0,15,138	0/1:21,0:19:99:124,0,302	0/0:27,0:26:2.44:0,2,216	1/1:6,0:2:5.94:41,6,0
chr10	28924698	.	CTCTCTCTCTCTCTCTCTG	C	2842.29	PASS	AB=0.969;AC=34;AF=0.654;AN=52;BaseQRankSum=1.775;DP=585;FS=2.155;HRun=0;HaplotypeScore=180.1835;InbreedingCoeff=-0.0334;MQ=46.42;MQ0=56;MQRankSum=0.392;QD=5.62;ReadPosRankSum=-0.052;VQSLOD=2.5058;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:58,0:56:5:5,0,37	1/1:12,0:10:5.58:256,6,0	./.	./.	0/1:16,0:15:2.85:3,0,100	0/1:16,0:16:77.88:78,0,139	0/0:33,0:30:2.87:0,3,199	0/0:14,0:11:8.88:0,9,79	0/1:15,0:15:7.25:204,0,7	1/1:22,0:20:19.70:522,20,0	1/1:23,0:23:1.45:128,1,0	1/1:13,0:12:11.98:167,12,0	1/1:19,0:18:2.23:109,2,0	1/1:9,0:8:2.99:24,3,0	1/1:31,0:28:7.46:277,7,0	1/1:14,0:14:17.96:240,18,0	0/1:41,0:36:73.40:73,0,1418	0/1:21,0:18:3.28:3,0,790	0/1:14,0:11:35.17:148,0,35	0/1:11,16:25:8.84:29,0,9	0/1:27,0:20:33.65:43,0,34	0/1:21,0:21:0:0,0,0	0/1:13,0:10:99:128,0,129	1/1:37,0:35:2.92:17,3,0	0/0:24,0:22:15.41:0,15,118	1/1:21,0:19:8.19:400,8,0	0/1:29,0:28:25.57:73,0,26	1/1:7,0:3:8.93:65,9,0
chr10	28924700	.	CTCTCTCTCTCTCTCTG	C	3203.12	PASS	AB=0.950;AC=36;AF=0.692;AN=52;BaseQRankSum=0.534;DP=576;FS=3.172;HRun=0;HaplotypeScore=171.6335;InbreedingCoeff=-0.0293;MQ=46.51;MQ0=56;MQRankSum=-0.086;QD=6.27;ReadPosRankSum=1.133;VQSLOD=2.9092;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:57,0:55:0:0,0,0	1/1:12,0:10:5.60:223,6,0	./.	./.	0/1:12,4:15:3.40:3,0,57	0/1:16,0:16:96.23:96,0,105	0/0:34,0:31:26.31:0,26,266	0/1:14,0:11:13.84:14,0,15	0/1:14,0:14:4.04:208,0,4	1/1:23,0:21:44.29:719,44,0	1/1:17,5:22:1.45:128,1,0	1/1:12,0:11:11.98:185,12,0	1/1:19,0:18:2.54:92,3,0	1/1:9,0:8:2.99:24,3,0	0/1:31,0:28:13.36:237,0,13	1/1:15,0:15:17.96:223,18,0	0/1:39,0:34:81.35:81,0,1002	0/1:19,0:16:10.59:11,0,567	0/1:14,0:11:18.95:172,0,19	1/1:24,1:23:6.78:39,7,0	0/1:26,0:19:33.51:53,0,34	0/1:7,15:22:0:0,0,0	0/1:13,0:10:99:127,0,110	1/1:37,0:35:2.92:17,3,0	0/0:18,7:23:18.09:0,18,129	1/1:20,0:18:26.30:496,26,0	1/1:11,17:27:1.84:110,2,0	1/1:8,0:4:11.92:88,12,0
chr10	28924702	.	CTCTCTCTCTCTCTG	C	2982.88	PASS	AB=0.996;AC=36;AF=0.720;AN=50;BaseQRankSum=-0.252;DP=559;FS=2.311;HRun=0;HaplotypeScore=159.4213;InbreedingCoeff=-0.0181;MQ=46.93;MQ0=52;MQRankSum=0.192;QD=6.67;ReadPosRankSum=0.906;VQSLOD=2.8189;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	1/1:12,0:10:5.68:193,6,0	./.	./.	0/1:15,0:14:5.11:5,0,50	0/1:15,0:15:77.93:78,0,94	0/0:32,0:29:39.37:0,39,302	1/1:14,0:11:2.84:20,3,0	0/1:14,0:14:4.34:193,0,4	1/1:24,0:22:45.25:642,45,0	1/1:21,0:21:4.44:152,4,0	1/1:11,0:10:11.98:168,12,0	1/1:19,0:18:2.54:76,3,0	1/1:9,0:9:5.99:49,6,0	0/1:31,0:28:14.90:209,0,15	1/1:15,0:15:17.96:206,18,0	0/1:38,0:33:99:108,0,617	0/1:18,0:15:31.32:31,0,381	0/1:13,0:10:18.22:152,0,18	1/1:25,0:23:6.78:39,7,0	0/1:26,0:19:33.50:53,0,33	0/1:21,1:22:0:0,0,0	0/1:13,0:10:90.86:127,0,91	1/1:37,0:35:2.92:17,3,0	0/0:24,0:22:18.09:0,18,128	1/1:19,0:17:26.75:431,27,0	1/1:28,0:27:2.01:95,2,0	1/1:8,0:4:11.92:88,12,0
chr10	28924998	.	A	ATG	4366.25	PASS	AB=0.695;AC=10;AF=0.179;AN=56;BaseQRankSum=-3.345;DP=742;FS=0.849;HRun=0;HaplotypeScore=171.4307;InbreedingCoeff=0.5109;MQ=59.31;MQ0=7;MQRankSum=-3.540;QD=27.29;ReadPosRankSum=2.362;VQSLOD=5.5790;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:59:99:0,108,1225	0/1:5,2:7:27.15:87,0,27	0/0:35,0:18:35.56:0,36,338	0/0:27,0:16:19.86:0,20,196	0/0:17,0:18:41.96:0,42,484	0/0:23,0:23:41.96:0,42,484	0/0:27,0:29:53.30:0,53,567	0/0:26,0:26:29.51:0,30,444	0/0:21,0:22:47.82:0,48,545	0/0:26,0:28:71.88:0,72,823	0/0:13,0:14:23.86:0,24,255	0/0:28,0:28:62.77:0,63,721	0/1:9,8:17:66.40:459,0,66	0/1:11,14:25:57.33:622,0,57	1/1:13,21:34:84.27:1303,84,0	1/1:13,19:31:33.41:1017,33,0	0/0:27,0:30:47.71:0,48,613	0/0:21,0:22:38.74:0,39,424	0/0:16,0:17:26.75:0,27,281	0/0:27,0:26:60.05:0,60,668	0/0:37,0:37:84.26:0,84,1008	0/0:31,0:32:40.05:0,40,665	1/1:6,7:13:21.04:307,21,0	0/1:17,15:32:26.48:572,0,26	0/0:26,0:27:50.99:0,51,592	0/0:28,0:31:59.56:0,60,635	0/0:29,0:33:77.10:0,77,826	0/0:14,0:15:41.27:0,41,437
chr10	28925294	.	TAC	T	14090.20	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-4.441;DP=723;FS=0.000;HRun=0;HaplotypeScore=95.6525;InbreedingCoeff=0.9578;MQ=68.60;MQ0=3;MQRankSum=0.508;QD=21.51;ReadPosRankSum=5.145;VQSLOD=5.2511;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,39:44:72.22:863,72,0	1/1:2,4:6:9.03:108,9,0	0/0:35,0:21:21.65:0,22,451	0/0:33,0:22:29.96:0,30,377	1/1:10,17:27:36.11:432,36,0	1/1:7,21:28:39.24:696,39,0	1/1:6,18:24:45.14:540,45,0	1/1:9,18:27:48.09:529,48,0	1/1:7,19:27:35.94:410,36,0	1/1:11,25:36:75.23:897,75,0	1/1:5,15:20:27.08:324,27,0	1/1:3,15:19:38.95:446,39,0	1/1:6,18:25:50.99:590,51,0	1/1:5,19:24:48.15:576,48,0	1/1:7,15:22:33.10:396,33,0	1/1:5,28:34:72.05:842,72,0	1/1:8,20:28:45.14:540,45,0	1/1:8,18:26:46.16:548,46,0	1/1:9,12:20:33.10:388,33,0	1/1:7,9:17:24.07:288,24,0	1/1:6,28:37:83.85:960,84,0	1/1:6,22:29:57.17:683,57,0	1/1:4,11:16:23.59:265,24,0	1/1:8,28:36:72.22:863,72,0	1/1:2,14:17:32.93:374,33,0	1/1:6,25:31:75.22:887,75,0	1/1:8,16:23:38.73:467,39,0	1/1:4,6:10:15.04:180,15,0
chr10	28925600	.	T	TAGAG	4358.08	PASS	AB=0.800;AC=46;AF=0.958;AN=48;BaseQRankSum=-0.127;DP=445;FS=0.000;HRun=0;HaplotypeScore=81.9932;InbreedingCoeff=-0.1008;MQ=66.10;MQ0=8;MQRankSum=-1.374;QD=11.65;ReadPosRankSum=-0.807;VQSLOD=4.0211;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:24,7:36:6.47:143,6,0	./.	./.	./.	0/1:17,0:17:41.09:64,0,41	1/1:8,0:8:9.01:162,9,0	1/1:6,4:11:3.01:71,3,0	1/1:29,0:29:6.92:62,7,0	1/1:3,0:9:2.74:12,3,0	1/1:19,0:19:29.21:396,29,0	1/1:3,1:9:8.73:104,9,0	1/1:5,3:10:5.61:81,6,0	0/1:4,5:12:34.98:158,0,35	1/1:6,2:12:7.38:138,7,0	1/1:9,6:17:9.03:205,9,0	1/1:6,7:16:14.79:297,15,0	1/1:7,12:19:17.86:427,18,0	1/1:14,8:22:9.03:213,9,0	1/1:15,0:15:12.04:228,12,0	1/1:12,0:12:3.90:52,4,0	1/1:15,6:24:5.70:83,6,0	1/1:15,2:17:18.04:363,18,0	./.	1/1:4,4:10:8.77:154,9,0	1/1:5,1:11:5.75:83,6,0	1/1:6,4:14:23.82:418,24,0	1/1:9,5:14:12.04:277,12,0	1/1:4,3:10:9.01:165,9,0
chr10	28925704	.	CTGGT	C	907.97	PASS	AC=18;AF=0.818;AN=22;BaseQRankSum=-1.222;DP=86;FS=23.062;HRun=0;HaplotypeScore=25.5609;InbreedingCoeff=0.3824;MQ=76.75;MQ0=3;MQRankSum=-2.269;QD=23.89;ReadPosRankSum=0.000;VQSLOD=1.4877;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:6,0:4:6.02:0,6,92	0/0:15,0:5:3.45:0,3,25	./.	./.	./.	1/1:0,8:8:24.08:445,24,0	./.	1/1:0,2:2:6.02:84,6,0	./.	./.	./.	1/1:2,0:2:5.99:50,6,0	./.	./.	1/1:0,2:8:6.02:99,6,0	1/1:0,0:11:3.01:33,3,0	1/1:0,1:1:3.01:57,3,0	./.	./.	./.	1/1:1,0:1:3:25,3,0	./.	./.	./.	1/1:0,3:3:9.03:163,9,0	1/1:2,0:2:3.01:45,3,0
chr10	28927877	.	ACAACCAACCAACCAACCAACCAAC	A	21943.37	PASS	AB=0.846;AC=47;AF=0.839;AN=56;BaseQRankSum=5.772;DP=569;FS=1.365;HRun=0;HaplotypeScore=331.5016;InbreedingCoeff=0.7511;MQ=60.94;MQ0=9;MQRankSum=-5.021;QD=49.42;ReadPosRankSum=4.696;VQSLOD=2.3828;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,9:28:12.06:1124,12,0	1/1:5,5:10:12.04:755,12,0	0/0:49,0:25:33.04:0,33,1405	0/0:55,0:38:63.64:0,64,2503	1/1:10,7:17:9.03:516,9,0	1/1:13,4:17:9.03:566,9,0	1/1:19,6:25:9.03:519,9,0	1/1:34,0:34:12.02:198,12,0	1/1:6,8:14:24.08:1509,24,0	1/1:13,11:24:33.09:1499,33,0	1/1:5,4:9:12.04:755,12,0	1/1:14,10:24:21.07:1320,21,0	1/1:15,11:26:21.07:1321,21,0	1/1:14,8:22:24.08:1509,24,0	1/1:4,15:19:33.06:2075,33,0	1/1:9,6:15:12.04:755,12,0	0/0:4,0:11:12.04:0,12,646	0/0:4,0:10:18.06:0,18,810	1/1:9,6:15:17.97:795,18,0	1/1:6,6:12:15.05:943,15,0	1/1:18,8:26:3.48:189,3,0	1/1:9,4:13:6.49:378,6,0	1/1:7,6:13:9.03:566,9,0	0/1:9,2:11:0.72:366,0,1	1/1:13,8:21:18.06:1132,18,0	1/1:12,9:21:27.09:1457,27,0	1/1:10,7:17:14.93:943,15,0	1/1:5,6:11:12.04:755,12,0
chr10	28933887	.	T	TAC	20441.86	PASS	AB=0.700;AC=43;AF=0.768;AN=56;BaseQRankSum=-5.881;DP=1032;FS=5.508;HRun=0;HaplotypeScore=166.1325;InbreedingCoeff=0.0344;MQ=53.23;MQ0=18;MQRankSum=1.681;QD=21.96;ReadPosRankSum=1.307;VQSLOD=5.1321;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:38,18:55:54.56:1555,55,0	1/1:2,6:8:6.02:96,6,0	0/0:52,0:16:5.75:0,6,48	0/0:49,0:20:10.69:0,11,247	1/1:18,11:29:17.99:746,18,0	1/1:7,19:26:24.08:385,24,0	0/1:27,8:35:72.39:841,0,72	0/1:44,6:50:99:629,0,157	0/1:13,27:41:27.20:566,0,27	1/1:13,28:43:37.84:1114,38,0	1/1:5,15:20:33.11:513,33,0	0/1:28,15:43:56.70:1041,0,57	1/1:23,21:44:57.29:1328,57,0	0/1:24,33:59:63.80:955,0,64	1/1:24,15:37:32.97:976,33,0	0/1:21,15:33:8.74:826,0,9	0/1:12,20:32:70.70:442,0,71	0/1:19,10:30:46.46:707,0,46	1/1:12,9:19:30.55:448,31,0	1/1:12,9:21:6.78:586,7,0	1/1:52,41:94:59.16:2417,59,0	0/1:7,18:25:51.32:220,0,51	1/1:24,10:34:29.87:858,30,0	1/1:36,21:56:49.59:1422,50,0	1/1:13,8:21:11.98:631,12,0	1/1:21,11:30:23.37:735,23,0	1/1:5,17:22:15.05:241,15,0	1/1:4,6:10:13.43:163,13,0
chr10	28934065	.	CCA	C	7133.91	PASS	AB=0.762;AC=49;AF=0.942;AN=52;BaseQRankSum=-0.452;DP=790;FS=10.400;HRun=0;HaplotypeScore=137.1610;InbreedingCoeff=-0.0847;MQ=56.33;MQ0=35;MQRankSum=1.620;QD=10.24;ReadPosRankSum=-0.517;VQSLOD=4.1358;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:21,6:30:43.11:346,43,0	1/1:7,4:15:15.33:149,15,0	./.	./.	1/1:11,3:19:0.34:141,0,0	0/1:16,11:28:39.41:192,0,39	1/1:25,6:31:25.76:309,26,0	0/1:34,2:35:2.96:122,0,3	1/1:17,12:31:30.42:325,30,0	1/1:15,10:24:9.44:220,9,0	1/1:8,5:13:12.03:125,12,0	1/1:9,7:17:30.68:292,31,0	1/1:16,11:30:29.31:272,29,0	1/1:22,6:30:23.13:366,23,0	1/1:27,9:37:50.94:528,51,0	1/1:19,8:30:44.79:457,45,0	1/1:17,15:37:61.75:562,62,0	1/1:14,4:18:22.30:231,22,0	1/1:11,2:13:7.58:89,8,0	1/1:7,7:15:11.76:114,12,0	1/1:59,19:81:48.67:926,49,0	0/1:10,12:23:31.23:176,0,31	1/1:13,13:25:17.88:180,18,0	1/1:30,7:39:38.59:399,39,0	1/1:20,2:24:23.21:200,23,0	1/1:17,5:19:28.75:298,29,0	1/1:7,4:11:6.02:67,6,0	1/1:7,0:8:4.12:46,4,0
chr10	28937015	.	T	TACACAC	6716.88	PASS	AB=0.740;AC=48;AF=0.960;AN=50;BaseQRankSum=0.042;DP=569;FS=0.000;HRun=0;HaplotypeScore=146.2031;InbreedingCoeff=0.1239;MQ=68.14;MQ0=5;MQRankSum=-1.697;QD=13.25;ReadPosRankSum=0.644;VQSLOD=4.0358;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:33,0:33:21.06:337,21,0	1/1:9,0:9:2.59:48,3,0	./.	./.	1/1:17,0:17:21.02:375,21,0	1/1:24,0:24:30.09:540,30,0	1/1:23,0:23:11.83:159,12,0	1/1:26,0:26:7.96:62,8,0	1/1:19,0:19:6:114,6,0	1/1:14,0:12:11.53:161,12,0	1/1:19,0:19:14.86:242,15,0	1/1:20,0:20:8.95:122,9,0	1/1:18,0:18:5.76:110,6,0	1/1:17,0:17:21.53:390,22,0	1/1:19,0:18:8.98:166,9,0	1/1:18,0:18:23.59:413,24,0	1/1:24,0:24:36.09:555,36,0	0/1:10,0:13:60.02:60,0,68	1/1:13,0:13:9.86:116,10,0	1/1:18,0:18:18.05:307,18,0	1/1:27,0:27:30.02:449,30,0	1/1:27,0:27:23.98:366,24,0	0/1:10,8:20:0.04:0,0,0	1/1:38,0:39:41.62:674,42,0	1/1:22,0:22:15.50:285,16,0	1/1:19,0:19:33.90:499,34,0	./.	1/1:9,0:9:9.03:165,9,0
chr10	28937050	.	A	ACACACA	6480.49	PASS	AB=1.000;AC=48;AF=0.960;AN=50;BaseQRankSum=-3.817;DP=602;FS=0.000;HRun=0;HaplotypeScore=123.6598;InbreedingCoeff=0.1004;MQ=52.21;MQ0=13;MQRankSum=2.810;QD=12.56;ReadPosRankSum=1.457;VQSLOD=3.3254;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:33,0:33:21.06:337,21,0	1/1:12,0:12:3.01:49,3,0	./.	./.	1/1:22,0:22:21.02:375,21,0	1/1:17,0:17:30.09:540,30,0	1/1:17,0:17:11.37:158,11,0	1/1:23,0:23:9.62:34,10,0	1/1:17,7:25:5.95:113,6,0	1/1:9,0:8:8.52:120,9,0	1/1:18,0:18:14.53:242,15,0	1/1:21,0:21:8.86:121,9,0	1/1:16,0:16:6.02:111,6,0	1/1:18,0:18:21.53:390,22,0	1/1:19,0:18:9.92:167,10,0	1/1:23,0:23:23.86:413,24,0	1/1:26,0:26:33.56:517,34,0	0/1:14,0:14:31.64:32,0,70	1/1:16,0:16:10.69:97,11,0	1/1:20,0:19:18.05:308,18,0	1/1:36,0:34:29.76:449,30,0	1/1:25,0:24:24:366,24,0	0/1:20,0:20:0.02:0,0,0	1/1:28,0:28:38.48:615,38,0	1/1:16,0:16:15.23:285,15,0	1/1:24,0:24:36.27:489,36,0	./.	1/1:18,0:18:0.23:153,0,0
chr10	28940083	.	G	GGTGT	3196.93	PASS	AB=0.815;AC=39;AF=0.780;AN=50;BaseQRankSum=-2.713;DP=688;FS=0.000;HRun=0;HaplotypeScore=126.9475;InbreedingCoeff=0.0036;MQ=64.85;MQ0=15;MQRankSum=0.593;QD=5.63;ReadPosRankSum=0.810;VQSLOD=2.4141;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:32,0:32:2.38:99,0,2	1/1:5,2:10:3.48:72,3,0	./.	./.	0/0:13,1:16:3:0,3,28	1/1:20,8:29:5.35:82,5,0	0/1:33,0:36:10.14:224,0,10	1/1:38,0:38:6:61,6,0	0/0:12,7:22:0.90:0,1,4	1/1:23,0:27:12.03:188,12,0	0/1:7,0:11:0.02:0,0,0	1/1:15,5:20:6.49:141,6,0	1/1:19,4:25:9.03:197,9,0	0/1:17,8:31:37.01:123,0,37	1/1:31,0:32:8.76:98,9,0	0/1:13,4:18:34.01:196,0,34	1/1:30,7:41:15.99:293,16,0	1/1:10,1:16:3.01:52,3,0	1/1:12,3:12:9.03:200,9,0	1/1:13,0:13:6:79,6,0	1/1:27,0:28:9.02:111,9,0	1/1:19,0:20:11.77:169,12,0	1/1:18,0:18:5.77:67,6,0	0/1:27,8:36:27.98:332,0,28	./.	1/1:20,4:28:20.96:308,21,0	0/1:14,2:18:34.15:93,0,34	1/1:10,1:14:6.02:138,6,0
chr10	28942919	.	CAA	C	9939.59	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=1.198;DP=583;FS=1.297;HRun=14;HaplotypeScore=115.1747;InbreedingCoeff=0.9731;MQ=65.93;MQ0=6;MQRankSum=2.720;QD=20.37;ReadPosRankSum=4.323;VQSLOD=4.1851;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,24:29:47.84:444,48,0	1/1:3,9:12:27.02:250,27,0	0/0:24,0:16:17.86:0,18,197	0/0:24,0:10:8.39:0,8,73	1/1:2,14:16:26.82:249,27,0	1/1:3,30:32:80.95:749,81,0	1/1:2,20:22:57.06:527,57,0	1/1:7,17:24:31.61:441,32,0	1/1:3,19:25:61.58:529,62,0	1/1:4,15:20:50.01:433,50,0	1/1:7,14:21:38.84:360,39,0	1/1:0,20:20:47.99:444,48,0	1/1:3,15:19:37.82:338,38,0	1/1:2,11:14:33.44:306,33,0	1/1:3,23:26:59.97:555,60,0	1/1:3,23:26:56.73:527,57,0	0/0:12,0:24:57.12:0,57,616	0/0:11,0:21:39.07:0,39,388	1/1:4,11:17:35.09:291,35,0	1/1:4,13:18:37.66:343,38,0	1/1:4,11:15:25.43:271,25,0	1/1:6,15:20:35.65:332,36,0	1/1:0,20:21:62.81:566,63,0	1/1:5,21:26:62.87:573,63,0	1/1:7,15:22:35.90:333,36,0	1/1:1,14:15:42.04:388,42,0	1/1:2,19:21:59.98:555,60,0	1/1:0,5:5:15.02:139,15,0
chr10	28942973	.	A	ACAACAG	1129.33	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-1.395;DP=725;FS=0.000;HRun=0;HaplotypeScore=184.1497;InbreedingCoeff=0.9741;MQ=59.42;MQ0=20;MQRankSum=-5.019;QD=28.23;ReadPosRankSum=1.268;VQSLOD=2.7679;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:79.23:0,79,1628	0/0:14,0:14:36.10:0,36,723	0/0:48,0:15:35.12:0,35,566	0/0:50,0:28:67.41:0,67,1200	0/0:26,0:26:75.16:0,75,1428	0/0:29,0:29:78.23:0,78,1617	0/0:21,0:21:33.08:0,33,670	0/0:26,0:27:62.89:0,63,1040	0/0:21,0:21:54.12:0,54,1014	0/0:33,0:33:99:0,99,1947	0/0:20,0:19:48.08:0,48,748	0/0:21,0:21:57.19:0,57,1216	0/0:20,0:20:54.14:0,54,1039	0/0:13,0:13:39.09:0,39,748	0/0:23,0:23:57.12:0,57,1008	0/0:29,0:29:77.93:0,78,1438	1/1:6,13:20:30.07:756,30,0	1/1:5,14:19:9.95:488,10,0	0/0:22,0:22:55.59:0,56,855	0/0:27,0:27:75.20:0,75,1456	0/0:23,0:23:57.01:0,57,925	0/0:26,0:26:59.78:0,60,1241	0/0:29,0:29:84.25:0,84,1682	0/0:34,0:34:93.15:0,93,1678	0/0:19,0:19:48.14:0,48,945	0/0:28,0:28:76.84:0,77,1477	0/0:29,0:29:84.21:0,84,1606	0/0:15,0:15:45.13:0,45,912
chr10	28944536	.	G	GT	4801.89	PASS	AB=0.810;AC=46;AF=0.821;AN=56;BaseQRankSum=-0.884;DP=481;FS=11.630;HRun=11;HaplotypeScore=124.8253;InbreedingCoeff=0.6413;MQ=66.96;MQ0=8;MQRankSum=-2.265;QD=13.45;ReadPosRankSum=-0.660;VQSLOD=3.2984;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:13,6:20:12.69:287,13,0	1/1:14,2:16:14.32:133,14,0	0/0:46,0:16:2.34:0,2,40	0/0:42,0:12:6.63:0,7,37	1/1:11,9:20:30.02:292,30,0	1/1:9,8:18:35.79:313,36,0	1/1:8,2:10:9.01:85,9,0	1/1:11,13:25:30.61:447,31,0	1/1:7,5:12:15:138,15,0	1/1:7,1:7:3.01:30,3,0	1/1:16,4:20:26.92:232,27,0	1/1:6,6:12:22.81:202,23,0	1/1:11,3:14:17.83:165,18,0	1/1:1,5:6:18.04:182,18,0	1/1:7,2:9:14.31:109,14,0	1/1:9,1:10:18.40:150,18,0	0/0:16,0:16:17.81:0,18,133	0/0:12,0:12:11.89:0,12,89	1/1:8,4:12:24:229,24,0	0/1:11,5:16:2.04:150,0,2	1/1:3,5:8:12.02:121,12,0	1/1:10,3:12:11.84:110,12,0	1/1:8,6:15:20.99:201,21,0	1/1:3,6:10:23.87:221,24,0	1/1:16,7:23:35.80:310,36,0	1/1:9,10:20:41.53:385,42,0	1/1:16,5:22:22.14:218,22,0	0/1:15,3:18:6.61:90,0,7
chr10	28944552	.	T	TAAA	8910.90	PASS	AB=1.000;AC=49;AF=0.875;AN=56;BaseQRankSum=-5.012;DP=505;FS=3.524;HRun=14;HaplotypeScore=86.6501;InbreedingCoeff=0.7403;MQ=58.76;MQ0=12;MQRankSum=-1.174;QD=21.02;ReadPosRankSum=0.891;VQSLOD=4.1920;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:12,7:23:31.26:388,31,0	1/1:3,8:12:24.08:408,24,0	0/1:75,0:20:4.24:4,0,131	0/0:59,0:11:0.26:0,0,85	1/1:13,4:24:46.22:563,46,0	1/1:7,8:18:45.06:659,45,0	1/1:2,3:9:20.96:245,21,0	1/1:19,7:29:26.72:358,27,0	1/1:6,2:8:12.04:181,12,0	1/1:3,5:8:21.07:308,21,0	1/1:5,6:20:48.11:672,48,0	1/1:6,3:10:14.98:199,15,0	1/1:5,3:10:18.06:277,18,0	1/1:8,0:8:12.04:163,12,0	1/1:4,4:12:21.04:278,21,0	1/1:2,6:11:24.03:315,24,0	0/0:2,0:10:14.54:0,15,87	0/0:0,0:11:17.55:0,18,105	1/1:6,5:15:28.29:397,28,0	1/1:5,9:19:45.02:619,45,0	1/1:4,1:6:9.01:113,9,0	1/1:8,6:13:19.29:287,19,0	1/1:9,4:14:29.24:358,29,0	1/1:7,3:10:18.06:276,18,0	1/1:9,4:21:45.03:564,45,0	1/1:8,7:18:33.05:461,33,0	1/1:6,6:17:32.92:510,33,0	1/1:3,3:10:24.02:309,24,0
chr10	28945701	.	AG	A	2567.80	PASS	AC=44;AF=0.957;AN=46;BaseQRankSum=1.462;DP=121;FS=0.000;HRun=2;HaplotypeScore=135.8888;InbreedingCoeff=0.1884;MQ=35.46;MQ0=0;MQRankSum=-1.732;QD=21.76;ReadPosRankSum=1.687;VQSLOD=3.5985;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,10:11:21.07:264,21,0	1/1:0,7:7:21.07:261,21,0	0/0:1,0:1:2.74:0,3,12	./.	1/1:1,10:11:14.51:146,15,0	1/1:0,2:2:3.01:39,3,0	1/1:0,8:8:12.03:141,12,0	1/1:1,5:6:6.02:78,6,0	1/1:0,3:3:4.83:39,5,0	1/1:1,7:8:21.07:270,21,0	1/1:0,2:2:3.01:38,3,0	1/1:0,3:3:2.88:15,3,0	1/1:0,4:4:5.98:52,6,0	./.	./.	./.	1/1:1,3:4:2.78:38,3,0	./.	1/1:1,2:3:3.01:39,3,0	1/1:2,4:6:9:98,9,0	1/1:1,4:5:6.02:77,6,0	1/1:0,9:9:21.07:270,21,0	1/1:1,5:6:17.89:176,18,0	1/1:0,2:2:2.04:6,2,0	1/1:1,5:6:15.05:191,15,0	1/1:0,4:4:12.04:147,12,0	1/1:0,2:2:3.01:39,3,0	1/1:0,6:6:18.06:230,18,0
chr10	28945707	.	AC	A	2053.43	PASS	AC=44;AF=0.957;AN=46;BaseQRankSum=1.582;DP=113;FS=0.000;HRun=4;HaplotypeScore=138.4221;InbreedingCoeff=0.2003;MQ=36.01;MQ0=0;MQRankSum=-1.732;QD=18.67;ReadPosRankSum=1.582;VQSLOD=2.3497;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,7:9:18.05:212,18,0	1/1:3,3:6:9.02:102,9,0	0/0:1,0:1:3.01:0,3,30	./.	1/1:4,6:10:14.35:134,14,0	1/1:0,4:4:4.56:40,5,0	1/1:1,6:7:9:94,9,0	1/1:1,5:6:9.03:108,9,0	1/1:0,3:3:4.56:35,5,0	1/1:2,5:7:15.04:178,15,0	1/1:0,2:2:3.01:35,3,0	1/1:0,3:3:2.74:12,3,0	1/1:0,5:5:5.95:46,6,0	./.	./.	./.	1/1:0,3:3:2.78:36,3,0	./.	1/1:0,1:1:3.01:36,3,0	1/1:1,3:4:8.96:90,9,0	1/1:0,4:4:6.02:72,6,0	1/1:1,8:9:15.04:178,15,0	1/1:0,6:6:17.75:171,18,0	1/1:0,1:1:2.04:6,2,0	1/1:0,7:7:14.95:177,15,0	1/1:0,4:4:12.03:135,12,0	1/1:0,2:2:3.01:36,3,0	1/1:0,7:7:18.05:212,18,0
chr10	28945724	.	TC	T	2227.03	PASS	AC=44;AF=0.957;AN=46;BaseQRankSum=1.455;DP=102;FS=0.000;HRun=3;HaplotypeScore=139.9238;InbreedingCoeff=0.2404;MQ=37.06;MQ0=0;MQRankSum=-1.732;QD=22.27;ReadPosRankSum=0.300;VQSLOD=2.8997;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,6:6:18.01:203,18,0	1/1:0,3:3:9.03:106,9,0	0/0:1,0:1:2.68:0,3,11	./.	1/1:1,6:7:16.35:127,16,0	1/1:0,5:5:11.93:112,12,0	1/1:1,5:6:6:61,6,0	1/1:1,6:7:18.06:221,18,0	1/1:0,2:2:4.82:37,5,0	1/1:0,8:8:18.51:208,19,0	1/1:0,1:1:3.01:37,3,0	1/1:0,3:3:2.84:14,3,0	1/1:0,6:6:5.97:49,6,0	./.	./.	./.	1/1:0,3:3:2.22:7,2,0	./.	1/1:0,4:4:12.04:149,12,0	1/1:0,3:3:8.99:94,9,0	1/1:1,2:3:3.01:37,3,0	1/1:1,6:7:15.05:185,15,0	1/1:0,5:5:14.83:140,15,0	1/1:0,1:1:2.04:6,2,0	1/1:1,6:7:18.05:215,18,0	1/1:0,4:4:11.97:121,12,0	1/1:0,3:3:3.01:37,3,0	1/1:1,5:6:12.04:144,12,0
chr10	28945739	.	CCA	C	2429.55	PASS	AB=0.500;AC=37;AF=0.740;AN=50;BaseQRankSum=-2.384;DP=103;FS=0.000;HRun=0;HaplotypeScore=150.2792;InbreedingCoeff=0.3846;MQ=37.13;MQ0=0;MQRankSum=-0.490;QD=25.85;ReadPosRankSum=3.619;VQSLOD=4.2846;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,4:5:12.04:182,12,0	1/1:0,3:3:9.03:134,9,0	0/0:1,0:1:0.89:0,1,2	./.	1/1:0,5:5:14.43:128,14,0	1/1:0,5:5:12:144,12,0	1/1:0,5:5:6.02:88,6,0	1/1:0,5:5:15.05:229,15,0	1/1:0,3:3:5.12:33,5,0	1/1:0,8:8:20.59:226,21,0	1/1:0,2:2:2.98:46,3,0	0/1:0,3:3:13.89:27,0,14	1/1:0,7:7:10.77:154,11,0	./.	1/1:0,3:3:1.95:43,2,0	0/0:0,1:1:1.25:0,1,3	0/0:0,1:1:2.90:0,3,16	0/0:0,1:1:0.47:0,0,1	1/1:0,5:5:12.04:182,12,0	1/1:0,3:3:4.50:68,4,0	./.	1/1:1,9:10:16.68:220,17,0	1/1:0,5:5:14.47:129,14,0	0/0:0,1:1:1.82:0,2,5	1/1:0,9:9:16.84:267,17,0	1/1:0,6:6:17.74:180,18,0	0/0:0,3:3:0.03:0,0,0	1/1:0,2:2:5.61:55,6,0
chr10	28945790	.	CT	C	1280.98	PASS	AB=0.500;AC=45;AF=0.900;AN=50;BaseQRankSum=0.518;DP=158;FS=2.309;HRun=2;HaplotypeScore=284.4787;InbreedingCoeff=0.0176;MQ=27.83;MQ0=0;MQRankSum=0.619;QD=8.26;ReadPosRankSum=-1.305;VQSLOD=0.6202;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,3:3:1.06:21,1,0	1/1:0,2:2:1.55:4,2,0	./.	./.	1/1:0,8:8:10.33:47,10,0	1/1:0,7:7:10.68:85,11,0	1/1:0,6:6:2.09:16,2,0	0/1:0,5:5:3.08:48,0,3	1/1:0,6:6:9.44:50,9,0	1/1:0,12:12:10.34:68,10,0	1/1:0,5:5:6.59:29,7,0	1/1:0,7:7:6.95:24,7,0	1/1:0,11:11:16.63:112,17,0	0/1:0,3:3:4.42:32,0,4	1/1:0,4:4:6.33:36,6,0	1/1:0,12:12:22.96:180,23,0	0/0:0,3:3:0.04:0,0,0	1/1:0,3:3:4.74:22,5,0	1/1:0,9:9:18.77:165,19,0	1/1:0,4:4:6.87:30,7,0	./.	1/1:0,9:9:7.35:60,7,0	1/1:0,4:4:5.75:48,6,0	1/1:0,3:3:5.93:40,6,0	1/1:0,11:11:10.12:145,10,0	0/1:0,13:13:2.62:56,0,3	1/1:0,6:6:2.39:12,2,0	1/1:0,2:2:3.01:35,3,0
chr10	28945818	.	GC	G	635.41	PASS	AB=0.500;AC=45;AF=0.900;AN=50;BaseQRankSum=0.113;DP=170;FS=0.000;HRun=2;HaplotypeScore=302.0823;InbreedingCoeff=0.0411;MQ=27.84;MQ0=0;MQRankSum=-1.431;QD=3.85;ReadPosRankSum=-1.193;VQSLOD=-0.7094;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,3:3:1.47:19,1,0	1/1:0,2:2:2.92:17,3,0	./.	./.	1/1:0,11:11:1.12:3,1,0	1/1:0,9:9:4.19:67,4,0	1/1:0,8:8:2.09:16,2,0	0/0:0,5:5:5.24:0,5,22	0/1:0,5:5:3.49:18,0,3	1/1:0,12:12:6.14:81,6,0	1/1:0,8:8:9.29:48,9,0	1/1:0,10:9:8.16:69,8,0	1/1:0,8:8:7.32:23,7,0	1/1:0,5:5:1.48:53,1,0	1/1:0,5:5:2.12:21,2,0	1/1:0,12:12:12.46:85,12,0	1/1:0,5:5:5.77:34,6,0	1/1:0,4:4:7.46:43,7,0	0/1:0,8:7:7.89:12,0,8	1/1:0,5:5:3.11:8,3,0	./.	1/1:0,9:9:4.78:19,5,0	1/1:0,6:6:2.65:16,3,0	1/1:0,2:2:2.04:6,2,0	1/1:0,11:11:7.18:30,7,0	0/1:0,10:10:13.12:15,0,13	1/1:0,6:6:2.70:24,3,0	1/1:0,1:1:2.80:13,3,0
chr10	28945866	.	AC	A	3739.85	PASS	AC=52;AF=1.000;AN=52;BaseQRankSum=-2.778;DP=217;FS=0.000;HRun=1;HaplotypeScore=281.1299;InbreedingCoeff=-0.0321;MQ=27.96;MQ0=0;MQRankSum=0.667;QD=17.23;ReadPosRankSum=1.468;VQSLOD=3.0642;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,8:8:13.94:122,14,0	1/1:0,5:5:12.01:110,12,0	./.	./.	1/1:0,13:13:12:108,12,0	1/1:0,13:13:29.48:274,29,0	1/1:0,10:10:19.58:169,20,0	1/1:0,12:12:33.01:304,33,0	1/1:0,6:6:11.08:105,11,0	1/1:0,12:12:18.31:221,18,0	1/1:0,10:10:22.31:172,22,0	1/1:1,10:10:23.64:210,24,0	1/1:0,9:9:20.20:155,20,0	1/1:0,10:10:30.01:267,30,0	1/1:0,7:7:13.27:113,13,0	1/1:2,13:15:31:271,31,0	1/1:0,7:7:18.02:169,18,0	1/1:0,5:5:13.84:123,14,0	1/1:0,8:7:13.95:120,14,0	1/1:0,10:10:19.55:152,20,0	1/1:0,4:4:6.01:55,6,0	1/1:0,7:7:8.37:63,8,0	1/1:0,4:4:6:54,6,0	1/1:0,5:5:8.68:65,9,0	1/1:0,5:5:6.89:57,7,0	1/1:0,12:13:9.09:141,9,0	1/1:0,4:4:7.54:52,8,0	1/1:0,4:4:9.02:88,9,0
chr10	28945868	.	GC	G	2778.13	PASS	AC=52;AF=0.963;AN=54;BaseQRankSum=-4.007;DP=218;FS=3.326;HRun=4;HaplotypeScore=274.0652;InbreedingCoeff=0.3142;MQ=32.78;MQ0=0;MQRankSum=-1.290;QD=12.80;ReadPosRankSum=1.211;VQSLOD=1.7546;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,7:8:13.01:94,13,0	1/1:0,5:5:11.91:86,12,0	0/0:1,0:1:3.01:0,3,41	./.	1/1:0,13:13:11.91:86,12,0	1/1:0,13:13:24.88:206,25,0	1/1:0,10:10:18.37:131,18,0	1/1:0,12:12:32.69:238,33,0	1/1:0,6:6:4.55:71,5,0	1/1:1,11:12:17.69:175,18,0	1/1:0,10:10:21.46:132,21,0	1/1:0,10:10:20.12:161,20,0	1/1:1,8:9:18.19:116,18,0	1/1:0,10:10:29.72:208,30,0	1/1:2,5:7:12.64:88,13,0	1/1:1,13:15:25.36:203,25,0	1/1:0,7:7:17.91:133,18,0	1/1:0,5:5:13.79:99,14,0	1/1:0,8:7:13.07:92,13,0	1/1:1,9:10:16.47:113,16,0	1/1:0,4:4:5.97:43,6,0	1/1:0,7:7:7.99:49,8,0	1/1:0,4:4:5.96:42,6,0	1/1:0,5:5:8:49,8,0	1/1:0,5:5:6.44:44,6,0	1/1:1,12:13:6.39:105,6,0	1/1:0,4:4:6.35:38,6,0	1/1:0,4:4:8.97:70,9,0
chr10	28945884	.	GA	G	7417.65	PASS	AC=52;AF=0.963;AN=54;BaseQRankSum=-2.504;DP=251;FS=10.160;HRun=4;HaplotypeScore=252.5755;InbreedingCoeff=0.6157;MQ=36.17;MQ0=0;MQRankSum=-1.798;QD=29.79;ReadPosRankSum=3.501;VQSLOD=1.3424;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,13:14:39.12:485,39,0	1/1:0,4:4:12.04:150,12,0	0/0:2,0:2:5.97:0,6,64	./.	1/1:0,12:12:21.07:259,21,0	1/1:1,12:13:27.25:392,27,0	1/1:0,14:14:33.05:407,33,0	1/1:0,14:14:39.13:503,39,0	1/1:0,9:9:10.26:256,10,0	1/1:1,8:9:14.94:263,15,0	1/1:1,7:8:19.88:235,20,0	1/1:0,13:12:27.64:419,28,0	1/1:0,13:13:36.03:438,36,0	1/1:0,13:13:39.13:499,39,0	1/1:0,6:6:12.91:190,13,0	1/1:0,14:14:31.91:447,32,0	1/1:1,8:9:21:251,21,0	1/1:1,8:9:25.63:308,26,0	1/1:1,5:5:14.88:128,15,0	1/1:1,9:10:21.07:268,21,0	1/1:0,7:7:12:155,12,0	1/1:0,8:8:16.86:190,17,0	1/1:0,7:7:18.06:219,18,0	1/1:0,7:7:10.85:121,11,0	1/1:0,5:5:8.51:86,9,0	1/1:1,12:13:31.01:359,31,0	1/1:0,4:4:8.66:116,9,0	1/1:0,8:8:21.07:272,21,0
chr10	28945899	.	GGT	G	3086.20	PASS	AB=0.767;AC=52;AF=0.929;AN=56;BaseQRankSum=0.963;DP=250;FS=9.899;HRun=0;HaplotypeScore=200.1086;InbreedingCoeff=0.2540;MQ=53.40;MQ0=0;MQRankSum=-1.845;QD=12.60;ReadPosRankSum=2.614;VQSLOD=2.7229;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,16:16:42.24:202,42,0	1/1:0,4:4:11.61:64,12,0	0/0:5,0:5:2.90:0,3,33	0/1:3,0:3:2.96:15,0,3	1/1:1,10:11:19.29:106,19,0	1/1:1,9:10:19.60:121,20,0	1/1:0,16:16:40.21:226,40,0	1/1:3,12:15:43.82:288,44,0	1/1:0,7:7:19.99:103,20,0	1/1:0,4:4:7.60:48,8,0	1/1:2,4:6:1.41:24,1,0	1/1:0,13:12:28.14:147,28,0	1/1:1,13:14:38.55:191,39,0	1/1:1,20:21:56.91:253,57,0	1/1:0,4:4:10.70:47,11,0	1/1:3,10:13:34.86:167,35,0	1/1:1,6:7:16.57:86,17,0	1/1:1,10:11:32.35:223,32,0	1/1:2,4:5:14.76:105,15,0	0/1:1,7:8:0.29:80,0,0	1/1:0,8:8:17.50:130,18,0	1/1:0,8:8:16.67:75,17,0	1/1:0,8:8:13.80:84,14,0	1/1:0,5:5:11.15:53,11,0	1/1:1,4:5:1.96:36,2,0	1/1:1,10:11:31.49:179,31,0	1/1:1,2:3:7.74:32,8,0	1/1:0,8:8:16.88:99,17,0
chr10	28947422	.	TCATC	T	6084.63	PASS	AB=0.984;AC=47;AF=0.904;AN=52;BaseQRankSum=5.020;DP=681;FS=2.138;HRun=0;HaplotypeScore=106.9753;InbreedingCoeff=0.0796;MQ=65.88;MQ0=9;MQRankSum=3.220;QD=10.07;ReadPosRankSum=1.686;VQSLOD=3.6145;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:27,21:48:33.11:506,33,0	1/1:7,6:13:11.99:142,12,0	./.	./.	1/1:12,7:19:20.90:264,21,0	1/1:20,13:32:18.06:276,18,0	1/1:30,0:30:27.04:298,27,0	0/0:28,0:24:0:0,0,0	0/1:19,1:20:9.90:10,0,507	1/1:19,11:27:29.99:351,30,0	1/1:10,8:18:20.90:241,21,0	1/1:13,17:30:18.06:276,18,0	1/1:11,9:20:15.04:224,15,0	1/1:10,7:17:6.02:92,6,0	1/1:10,10:20:9.03:138,9,0	1/1:9,14:23:17.94:276,18,0	0/1:24,0:24:69.95:131,0,70	0/1:17,0:16:60.75:134,0,61	1/1:6,2:8:6.02:92,6,0	1/1:11,9:20:29.96:360,30,0	1/1:19,19:38:21.07:322,21,0	1/1:16,12:27:24.81:276,25,0	1/1:13,9:22:17.94:276,18,0	1/1:15,10:25:14.83:230,15,0	1/1:18,11:28:15.05:230,15,0	1/1:18,13:31:38.88:353,39,0	1/1:18,14:31:36.02:499,36,0	1/1:7,2:8:6.02:92,6,0
chr10	28948117	.	G	GT	20288.87	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=12.403;DP=634;FS=0.927;HRun=2;HaplotypeScore=147.2171;InbreedingCoeff=0.9990;MQ=86.46;MQ0=0;MQRankSum=-10.074;QD=37.36;ReadPosRankSum=4.089;VQSLOD=4.2396;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,30:32:84.15:1139,84,0	1/1:3,10:13:33.11:474,33,0	0/0:29,0:29:81.22:0,81,954	0/0:22,0:22:63.18:0,63,756	1/1:3,21:24:51.11:692,51,0	1/1:3,24:27:72.21:1012,72,0	1/1:2,12:14:33.11:475,33,0	1/1:2,25:27:69.23:991,69,0	1/1:3,17:20:60.12:816,60,0	1/1:2,26:28:81.27:1159,81,0	1/1:3,12:15:36.12:516,36,0	1/1:1,8:9:24.08:345,24,0	1/1:3,22:25:69.19:965,69,0	1/1:2,18:20:57.05:749,57,0	1/1:1,15:16:45.15:647,45,0	1/1:0,11:11:30.10:431,30,0	0/0:24,0:24:66.18:0,66,803	0/0:16,0:16:42.13:0,42,521	1/1:8,9:17:39.13:560,39,0	1/1:1,36:37:99:1486,105,0	1/1:4,16:20:33.11:474,33,0	1/1:2,20:23:60.16:839,60,0	1/1:0,22:22:63.21:905,63,0	1/1:2,23:25:69.23:989,69,0	1/1:5,25:30:84.07:1091,84,0	1/1:3,26:29:78.26:1120,78,0	1/1:1,38:39:99:1639,114,0	1/1:0,20:20:54.18:777,54,0
chr10	28948182	.	CA	C	9199.94	PASS	AB=0.955;AC=53;AF=0.946;AN=56;BaseQRankSum=-0.876;DP=485;FS=14.270;HRun=10;HaplotypeScore=127.2892;InbreedingCoeff=0.5346;MQ=64.96;MQ0=0;MQRankSum=-6.399;QD=19.49;ReadPosRankSum=3.457;VQSLOD=4.0151;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,8:14:23.99:208,24,0	1/1:1,7:8:20.99:182,21,0	0/1:20,1:21:15.60:16,0,354	0/0:13,0:9:6.02:0,6,66	1/1:4,28:32:74.82:638,75,0	1/1:1,18:19:53.99:468,54,0	1/1:1,8:9:24:208,24,0	1/1:6,16:22:48.87:418,49,0	1/1:1,14:17:45.44:388,45,0	1/1:1,15:16:47.98:414,48,0	1/1:1,14:15:35.99:312,36,0	1/1:1,17:18:50.99:442,51,0	1/1:8,14:22:44.97:390,45,0	1/1:1,11:12:29.99:260,30,0	1/1:6,13:19:38.96:335,39,0	1/1:0,15:15:44.99:390,45,0	1/1:3,8:12:17.01:136,17,0	1/1:4,7:11:23.99:208,24,0	1/1:3,15:18:44.97:390,45,0	1/1:6,26:32:71.93:624,72,0	1/1:0,6:6:18:156,18,0	1/1:3,14:17:41.99:364,42,0	1/1:2,11:14:30.43:262,30,0	1/1:1,7:8:17.83:156,18,0	1/1:3,31:35:87.42:755,87,0	1/1:3,10:14:35.02:290,35,0	1/1:9,21:31:66.44:573,66,0	1/1:6,9:15:12.26:217,12,0
chr10	28948220	.	AT	A	4875.44	PASS	AB=0.728;AC=48;AF=0.857;AN=56;BaseQRankSum=-0.756;DP=521;FS=0.726;HRun=15;HaplotypeScore=115.3967;InbreedingCoeff=0.1209;MQ=67.26;MQ0=1;MQRankSum=-1.670;QD=9.77;ReadPosRankSum=2.489;VQSLOD=3.9116;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,10:11:19.89:133,20,0	1/1:2,7:9:23.60:154,24,0	0/1:25,0:14:4.91:5,0,25	0/0:20,0:14:10.41:0,10,87	1/1:12,16:31:26.94:279,27,0	0/1:15,9:25:21.97:173,0,22	1/1:4,10:14:32.42:208,32,0	0/1:13,12:26:29.95:200,0,30	1/1:6,7:14:25.61:158,26,0	1/1:11,8:22:16.59:154,17,0	1/1:3,16:20:43.25:274,43,0	1/1:11,4:16:26.24:151,26,0	1/1:9,9:19:14.80:162,15,0	0/1:6,6:12:4.22:110,0,4	1/1:9,19:28:54.94:350,55,0	1/1:7,9:16:3.06:146,3,0	1/1:5,0:16:18.30:53,18,0	1/1:3,0:11:13.75:39,14,0	1/1:4,15:20:55.23:351,55,0	1/1:9,13:26:32.03:304,32,0	1/1:4,6:10:17.71:115,18,0	1/1:9,12:22:2.29:244,2,0	0/1:4,8:13:21.05:128,0,21	0/1:5,3:8:14.54:46,0,15	1/1:10,17:28:28.84:306,29,0	1/1:3,10:14:20.31:184,20,0	1/1:10,15:28:13.93:298,14,0	1/1:5,8:13:6.93:149,7,0
chr10	28948774	.	T	TC	2586.44	PASS	AB=0.860;AC=35;AF=0.761;AN=46;BaseQRankSum=0.019;DP=279;FS=54.496;HRun=0;HaplotypeScore=28.0674;InbreedingCoeff=0.1966;MQ=19.96;MQ0=100;MQRankSum=0.511;QD=13.06;ReadPosRankSum=1.601;VQSLOD=1.5577;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:8,1:3:32.24:57,0,32	1/1:1,0:1:3.01:42,3,0	./.	./.	1/1:7,3:6:10.28:97,10,0	0/1:12,2:7:29.58:130,0,30	./.	0/0:31,0:8:12.87:0,13,165	1/1:15,4:11:20.90:278,21,0	1/1:7,2:2:6.02:90,6,0	1/1:5,3:6:12.02:155,12,0	1/1:5,3:5:12.02:163,12,0	1/1:5,0:4:6.02:89,6,0	1/1:5,6:9:18.06:271,18,0	./.	1/1:10,4:9:21:280,21,0	0/0:21,0:10:9.62:0,10,58	0/1:12,1:4:31.51:42,0,32	./.	0/1:1,1:2:35.39:41,0,35	0/0:5,0:2:2.52:0,3,33	1/1:6,1:6:18.06:279,18,0	1/1:5,2:2:3.01:45,3,0	1/1:13,4:10:6.78:45,7,0	1/1:3,3:5:15.05:222,15,0	0/1:12,1:8:94.63:112,0,95	1/1:8,2:5:12.04:182,12,0	1/1:13,1:5:9:112,9,0
chr10	28948816	.	T	TC	295.43	PASS	AB=0.900;AC=19;AF=0.633;AN=30;BaseQRankSum=3.538;DP=143;FS=8.443;HRun=0;HaplotypeScore=22.6505;InbreedingCoeff=0.3708;MQ=16.39;MQ0=35;MQRankSum=1.522;QD=6.03;ReadPosRankSum=0.178;VQSLOD=1.6081;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:38,0:3:9.03:0,9,125	0/0:22,0:4:9.03:0,9,123	./.	./.	./.	0/0:15,0:7:12:0,12,115	1/1:4,0:1:3.01:36,3,0	0/0:2,0:1:2.37:0,2,8	./.	./.	1/1:2,0:1:3.01:34,3,0	./.	1/1:3,1:3:5.22:34,5,0	1/1:1,1:1:3.01:46,3,0	1/1:8,4:5:4.30:55,4,0	0/1:8,1:6:19.08:102,0,19	./.	1/1:2,0:2:2.22:7,2,0	./.	1/1:2,0:2:2.99:24,3,0	./.	1/1:7,3:6:3.01:34,3,0	./.	0/0:5,0:2:6.02:0,6,64	./.	1/1:1,1:2:3.01:38,3,0
chr10	28948820	.	TTC	T	417.48	PASS	AB=0.866;AC=23;AF=0.676;AN=34;BaseQRankSum=1.842;DP=141;FS=5.792;HRun=0;HaplotypeScore=23.1877;InbreedingCoeff=0.0434;MQ=17.32;MQ0=36;MQRankSum=-0.537;QD=7.20;ReadPosRankSum=0.077;VQSLOD=1.9468;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,0:1:1.25:3,1,0	./.	0/0:38,0:3:6.02:0,6,68	0/0:22,0:4:9.03:0,9,112	./.	./.	./.	0/0:15,0:5:3.27:0,3,14	1/1:3,1:1:3.01:34,3,0	1/1:1,0:1:2.50:9,2,0	./.	./.	1/1:1,1:1:3.01:34,3,0	./.	1/1:3,1:3:6:52,6,0	1/1:1,0:1:3.01:36,3,0	0/1:9,3:4:0.19:93,0,0	0/1:4,5:6:53.94:95,0,54	./.	0/1:2,0:2:21.57:22,0,30	1/1:4,0:2:3.01:30,3,0	1/1:2,0:2:3:28,3,0	./.	0/1:7,1:5:3.45:30,0,3	./.	0/1:5,0:3:25.02:28,0,25	./.	1/1:2,1:3:3.01:36,3,0
chr10	28948822	.	C	CT	563.03	PASS	AB=0.867;AC=22;AF=0.688;AN=32;BaseQRankSum=1.784;DP=145;FS=1.475;HRun=2;HaplotypeScore=24.2477;InbreedingCoeff=0.1022;MQ=18.29;MQ0=36;MQRankSum=-0.667;QD=9.54;ReadPosRankSum=0.126;VQSLOD=1.1977;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:37,0:3:6.02:0,6,68	0/0:21,0:4:9.03:0,9,112	./.	./.	./.	0/0:18,0:6:2.25:0,2,18	1/1:2,1:1:3.01:34,3,0	1/1:2,0:2:4.31:14,4,0	./.	./.	1/1:2,0:1:3.01:35,3,0	./.	1/1:2,2:3:6.02:89,6,0	1/1:0,1:1:3.01:43,3,0	1/1:8,5:5:12.02:144,12,0	0/1:10,0:7:50.50:102,0,51	./.	0/1:1,1:2:31.51:39,0,32	1/1:3,1:2:3.01:30,3,0	1/1:1,1:2:3.01:45,3,0	./.	0/1:6,2:5:4.47:30,0,4	./.	0/1:5,0:3:1.79:34,0,2	./.	1/1:2,1:3:3.01:36,3,0
chr10	28948872	.	CTT	C	4558.20	PASS	AC=50;AF=0.926;AN=54;BaseQRankSum=1.912;DP=228;FS=1.908;HRun=4;HaplotypeScore=43.4092;InbreedingCoeff=0.5255;MQ=66.05;MQ0=37;MQRankSum=-3.779;QD=24.51;ReadPosRankSum=2.666;VQSLOD=2.4381;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,0:8:24.08:335,24,0	1/1:2,0:2:6.02:85,6,0	0/0:26,0:19:47.32:0,47,558	0/0:16,0:11:22.39:0,22,271	1/1:3,0:3:9.03:128,9,0	1/1:5,0:3:6.02:85,6,0	1/1:9,0:5:12.04:170,12,0	1/1:32,3:13:29.58:391,30,0	1/1:3,1:2:6.02:85,6,0	1/1:6,1:6:17.62:200,18,0	./.	1/1:3,0:2:6.02:85,6,0	1/1:2,1:2:6.02:83,6,0	1/1:3,0:2:6.02:85,6,0	1/1:6,2:7:18.05:233,18,0	1/1:5,1:6:18.06:252,18,0	1/1:15,2:10:19.98:282,20,0	1/1:8,3:10:26.82:349,27,0	1/1:7,0:2:6.02:86,6,0	1/1:3,0:2:6.02:73,6,0	1/1:6,1:6:18.06:245,18,0	1/1:4,0:4:9.03:116,9,0	1/1:3,0:2:6.02:85,6,0	1/1:16,2:16:41.71:571,42,0	1/1:2,0:2:6.02:85,6,0	1/1:4,0:4:8.82:106,9,0	1/1:8,0:8:21.07:299,21,0	1/1:4,1:2:3.01:42,3,0
chr10	28948874	.	T	TC	4922.52	PASS	AC=50;AF=0.926;AN=54;BaseQRankSum=2.544;DP=228;FS=3.189;HRun=0;HaplotypeScore=42.1096;InbreedingCoeff=0.5375;MQ=73.36;MQ0=27;MQRankSum=-4.404;QD=26.90;ReadPosRankSum=3.013;VQSLOD=5.6925;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,8:8:24.08:335,24,0	1/1:0,2:2:6.02:85,6,0	0/0:29,0:22:49.94:0,50,576	0/0:16,0:11:21.51:0,22,267	1/1:1,3:4:9.03:128,9,0	1/1:1,4:3:6.02:85,6,0	1/1:1,6:5:12.04:170,12,0	1/1:24,8:13:30.10:427,30,0	1/1:2,3:3:6.02:85,6,0	1/1:2,5:6:18.05:241,18,0	./.	1/1:1,4:4:6.02:85,6,0	1/1:1,2:3:6.02:87,6,0	1/1:2,2:3:8.98:104,9,0	1/1:3,5:7:18.06:265,18,0	1/1:3,5:8:24.03:315,24,0	1/1:4,10:9:23.99:325,24,0	1/1:4,6:10:27.09:394,27,0	1/1:3,2:2:6.02:86,6,0	1/1:0,2:2:6.02:90,6,0	1/1:2,6:8:18.06:261,18,0	1/1:0,4:4:9.03:133,9,0	1/1:1,2:2:6.02:85,6,0	1/1:7,13:17:41.72:594,42,0	1/1:0,3:3:6.02:85,6,0	1/1:1,3:4:9.02:113,9,0	1/1:0,8:8:21.07:299,21,0	1/1:3,1:2:3.01:44,3,0
chr10	28949580	.	AGG	A	16405.49	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=11.300;DP=431;FS=15.781;HRun=2;HaplotypeScore=167.0561;InbreedingCoeff=0.9257;MQ=99.56;MQ0=0;MQRankSum=-11.922;QD=44.46;ReadPosRankSum=7.489;VQSLOD=2.9728;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,29:30:87.29:1358,87,0	1/1:0,6:6:12.04:191,12,0	0/0:28,0:28:71.94:0,72,1419	0/0:33,0:34:93.31:0,93,1800	1/1:0,6:6:15.52:231,16,0	1/1:0,21:21:63.21:1015,63,0	1/1:2,21:23:68.43:1051,68,0	1/1:0,11:11:33.11:537,33,0	1/1:0,21:21:63.22:1022,63,0	1/1:0,15:15:42.14:675,42,0	1/1:0,6:6:18.06:291,18,0	1/1:1,17:18:54.17:851,54,0	1/1:2,11:13:39.13:622,39,0	1/1:1,12:12:33.11:525,33,0	1/1:0,24:24:72.25:1155,72,0	1/1:0,14:14:42.14:673,42,0	1/1:1,27:28:81.17:1281,81,0	1/1:1,11:12:33.07:507,33,0	1/1:0,18:18:51.16:803,51,0	1/1:1,7:8:21.07:341,21,0	1/1:2,14:16:39.57:480,40,0	1/1:0,7:7:21.07:340,21,0	1/1:0,9:9:24.08:387,24,0	1/1:3,12:15:30.10:470,30,0	1/1:1,3:4:9.03:146,9,0	1/1:0,10:10:30.10:488,30,0	1/1:0,17:16:48.16:775,48,0	1/1:2,2:4:12.04:191,12,0
chr10	28949585	.	TGAGAG	T	21157.89	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=10.644;DP=418;FS=9.639;HRun=0;HaplotypeScore=171.9122;InbreedingCoeff=0.9132;MQ=100.41;MQ0=0;MQRankSum=-12.131;QD=59.27;ReadPosRankSum=8.604;VQSLOD=4.4223;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,28:30:75.26:1654,75,0	1/1:1,4:5:12.51:235,13,0	0/0:31,0:31:84.62:0,85,2518	0/0:30,0:30:87.30:0,87,2445	1/1:0,6:6:12.51:267,13,0	1/1:0,21:21:63.22:1380,63,0	1/1:1,21:22:66.21:1409,66,0	1/1:0,13:13:39.12:826,39,0	1/1:0,21:21:63.22:1399,63,0	1/1:1,14:15:39.13:864,39,0	1/1:0,6:6:15.05:333,15,0	1/1:0,17:17:51.18:1133,51,0	1/1:1,11:12:36.12:789,36,0	1/1:0,12:11:33.11:723,33,0	1/1:0,24:24:69.17:1483,69,0	1/1:0,14:14:42.14:925,42,0	1/1:1,27:28:81.28:1745,81,0	1/1:0,11:11:30.10:666,30,0	1/1:1,13:14:42.14:924,42,0	1/1:1,7:8:24.08:520,24,0	1/1:1,14:15:20.78:326,21,0	1/1:0,7:7:18.06:400,18,0	1/1:1,8:9:27.09:582,27,0	1/1:1,12:13:20.76:465,21,0	1/1:0,3:3:9.03:200,9,0	1/1:0,10:10:30.10:668,30,0	1/1:0,17:16:48.16:1063,48,0	1/1:2,2:4:11.99:178,12,0
chr10	28949725	.	TCTC	T	17583.85	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=8.823;DP=508;FS=2.596;HRun=0;HaplotypeScore=97.1018;InbreedingCoeff=0.9933;MQ=79.42;MQ0=0;MQRankSum=-9.494;QD=43.20;ReadPosRankSum=6.044;VQSLOD=6.2587;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,27:28:63.22:1074,63,0	1/1:1,6:7:21.07:344,21,0	0/0:19,0:19:57.19:0,57,1262	0/0:27,0:26:78.27:0,78,1706	1/1:0,16:16:45.15:764,45,0	1/1:1,15:16:36.12:611,36,0	1/1:2,22:24:57.19:970,57,0	1/1:1,19:19:51.13:835,51,0	1/1:1,12:13:33.11:562,33,0	1/1:0,22:22:66.23:1125,66,0	1/1:1,18:19:54.18:916,54,0	1/1:0,14:14:42.14:715,42,0	1/1:2,13:15:27.09:460,27,0	1/1:0,15:15:42.14:715,42,0	1/1:0,20:20:54.18:920,54,0	1/1:0,14:14:36.12:613,36,0	0/0:35,0:35:96.33:0,96,2182	0/0:20,0:20:54.19:0,54,1245	1/1:3,8:11:24.08:409,24,0	1/1:0,17:17:45.15:766,45,0	1/1:1,19:20:54.18:918,54,0	1/1:0,27:27:69.23:1142,69,0	1/1:1,12:13:36.12:611,36,0	1/1:0,19:19:45.15:766,45,0	1/1:1,11:12:30.10:510,30,0	1/1:1,16:17:45.15:767,45,0	1/1:0,20:20:48.16:816,48,0	1/1:1,7:8:15.05:256,15,0
chr10	28950467	.	A	AC	28196.73	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=4.835;DP=781;FS=7.949;HRun=1;HaplotypeScore=121.8043;InbreedingCoeff=0.9988;MQ=76.47;MQ0=0;MQRankSum=-4.986;QD=41.10;ReadPosRankSum=1.882;VQSLOD=3.8401;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,50:50:99:2111,141,0	1/1:0,7:7:21.07:314,21,0	0/0:18,0:17:43.92:0,44,501	0/0:22,0:23:32.93:0,33,460	1/1:0,27:27:81.19:1178,81,0	1/1:1,28:29:78.26:1168,78,0	1/1:3,30:33:81.27:1213,81,0	1/1:0,36:36:99:1555,108,0	1/1:0,32:32:90.30:1348,90,0	1/1:0,36:35:99:1546,108,0	1/1:1,24:25:72.24:1078,72,0	1/1:1,26:28:72.24:1060,72,0	1/1:0,32:32:90.30:1347,90,0	1/1:0,24:24:72.24:1077,72,0	1/1:0,24:24:69.23:1034,69,0	1/1:0,24:24:66.22:989,66,0	0/0:38,0:38:99:0,114,1460	0/0:16,0:16:48.14:0,48,607	1/1:1,19:20:60.17:857,60,0	1/1:1,33:34:93.27:1361,93,0	1/1:1,37:38:93.32:1393,93,0	1/1:2,20:22:57.19:853,57,0	1/1:1,22:23:66.19:964,66,0	1/1:0,19:19:51.17:764,51,0	1/1:0,24:24:60.20:898,60,0	1/1:2,31:33:93.28:1348,93,0	1/1:0,37:37:99:1572,105,0	1/1:0,29:29:78.26:1167,78,0
chr10	28951405	.	A	ATCC	902.12	PASS	AB=0.912;AC=23;AF=0.442;AN=52;BaseQRankSum=2.642;DP=363;FS=9.849;HRun=0;HaplotypeScore=134.9542;InbreedingCoeff=-0.2546;MQ=40.35;MQ0=23;MQRankSum=-5.498;QD=4.18;ReadPosRankSum=1.280;VQSLOD=2.1768;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:9,1:9:1.93:100,0,2	0/1:4,2:6:44.48:57,0,44	0/0:24,0:5:15.05:0,15,248	0/0:33,0:9:23.99:0,24,262	0/1:12,0:12:4.81:5,0,69	0/1:13,2:15:72.25:72,0,123	./.	0/1:24,0:18:85.48:85,0,497	1/1:4,2:5:8.08:40,8,0	0/0:19,0:17:30.29:0,30,409	0/0:10,0:10:8.62:0,9,83	0/1:5,1:6:30.95:31,0,41	0/1:10,2:11:5.93:6,0,74	0/1:10,0:9:39.09:78,0,39	0/1:11,0:10:61.98:70,0,62	0/1:8,1:9:35.60:39,0,36	0/0:18,0:18:35.84:0,36,542	0/0:27,0:27:70.47:0,70,1150	0/1:6,0:6:64.72:65,0,94	0/1:12,2:13:8.72:9,0,142	0/1:2,2:4:0:0,0,0	0/1:13,0:12:38.51:39,0,71	1/1:10,0:9:4.51:80,5,0	./.	1/1:9,1:8:9.98:36,10,0	0/1:13,0:11:29.61:30,0,66	0/1:9,3:12:25.11:130,0,25	0/1:13,0:13:28.48:85,0,28
chr10	28951407	.	CTAT	C	1256.65	PASS	AB=0.809;AC=26;AF=0.500;AN=52;BaseQRankSum=5.666;DP=353;FS=13.607;HRun=0;HaplotypeScore=129.0726;InbreedingCoeff=-0.2941;MQ=40.14;MQ0=23;MQRankSum=-4.254;QD=5.74;ReadPosRankSum=1.437;VQSLOD=1.7874;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:8,1:9:43.35:43,0,46	0/1:5,0:6:10.68:11,0,33	0/0:27,0:7:21.02:0,21,249	0/0:33,0:9:7.46:0,7,266	0/1:11,1:12:13.46:13,0,91	0/1:9,5:14:83.50:166,0,83	./.	0/1:24,0:19:1.15:1,0,498	1/1:3,2:5:8.97:76,9,0	0/0:16,0:14:6.07:0,6,249	0/1:10,0:10:7.93:8,0,17	0/1:5,0:5:29.89:31,0,30	0/1:9,2:10:40.92:41,0,77	0/1:6,3:9:26.28:66,0,26	0/1:5,3:9:18.87:88,0,19	0/1:5,4:9:21.18:115,0,21	0/0:16,0:17:21.16:0,21,689	0/0:27,0:27:71.91:0,72,1440	0/1:3,2:6:46.64:47,0,100	0/1:10,3:12:56.66:57,0,119	1/1:4,0:4:0.47:2,0,0	0/1:6,6:12:51.64:116,0,52	1/1:6,2:8:3.28:29,3,0	./.	1/1:6,4:8:12.01:111,12,0	0/1:8,4:10:87.75:97,0,88	0/1:9,2:12:48.66:49,0,57	1/1:2,8:13:4.50:245,5,0
chr10	28951411	.	CTATCA	C	1708.41	PASS	AB=0.816;AC=27;AF=0.519;AN=52;BaseQRankSum=6.464;DP=353;FS=8.356;HRun=0;HaplotypeScore=135.8981;InbreedingCoeff=-0.2030;MQ=40.31;MQ0=24;MQRankSum=-7.103;QD=7.70;ReadPosRankSum=3.600;VQSLOD=2.0064;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:9,1:9:21.99:29,0,22	0/1:6,0:6:20.92:26,0,21	0/0:28,0:8:24.04:0,24,339	0/0:34,0:9:26.97:0,27,312	1/1:8,1:10:2.35:36,2,0	0/1:7,5:12:46.28:160,0,46	./.	0/0:28,0:21:15.98:0,16,294	1/1:5,2:6:5.41:73,5,0	0/1:11,0:12:49.15:49,0,66	1/1:7,0:10:5.60:38,6,0	0/0:4,0:4:4.36:0,4,29	0/1:10,2:11:50.52:59,0,51	0/1:6,3:9:13.28:89,0,13	0/1:6,3:9:4.27:112,0,4	0/1:5,4:9:12.95:131,0,13	0/1:15,0:15:0.67:1,0,796	0/0:25,0:25:16.56:0,17,1459	0/1:7,2:9:54.17:54,0,96	0/1:11,3:13:61.61:83,0,62	1/1:3,0:3:0.47:2,0,0	0/1:7,6:12:6.81:165,0,7	0/1:9,2:10:8.04:32,0,8	./.	1/1:7,4:9:12.04:147,12,0	0/1:9,4:11:59.50:131,0,59	0/1:9,2:11:61.21:61,0,68	1/1:5,8:13:4.70:385,5,0
chr10	28951440	.	CCTAT	C	675.04	PASS	AB=1.000;AC=10;AF=0.192;AN=52;BaseQRankSum=0.672;DP=319;FS=13.949;HRun=0;HaplotypeScore=133.6437;InbreedingCoeff=0.3372;MQ=38.06;MQ0=2;MQRankSum=0.169;QD=9.12;ReadPosRankSum=-1.330;VQSLOD=1.8658;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:8,0:7:0.01:0,0,0	0/0:5,0:4:0.51:0,1,9	0/0:20,0:14:27.08:0,27,503	0/0:12,0:7:3.01:0,3,63	0/0:8,0:6:0.40:0,0,1	0/0:13,0:10:2.97:0,3,20	0/1:7,0:4:0:0,0,0	0/0:31,0:26:38.62:0,39,409	0/0:7,0:7:0.64:0,1,13	0/0:13,0:10:14.24:0,14,92	0/0:7,0:6:1.82:0,2,6	0/0:7,0:7:2.44:0,2,12	0/0:10,0:9:11.19:0,11,56	0/0:11,0:9:9.99:0,10,45	0/1:8,0:8:0.02:0,0,0	0/1:14,0:11:10.07:10,0,15	1/1:8,4:12:21.05:347,21,0	1/1:15,6:21:5.67:417,6,0	0/0:8,0:6:3.01:0,3,62	0/0:17,0:13:1.80:0,2,25	1/1:4,0:4:3.18:15,3,0	0/0:16,0:15:5.56:0,6,47	0/0:13,0:10:2.83:0,3,17	./.	./.	0/0:10,0:8:6.02:0,6,106	0/0:10,0:9:3.29:0,3,33	0/0:10,0:10:8.94:0,9,92
chr10	28951451	.	A	ATCC	727.80	PASS	AB=0.976;AC=20;AF=0.370;AN=54;BaseQRankSum=4.236;DP=356;FS=5.112;HRun=0;HaplotypeScore=162.7600;InbreedingCoeff=0.0223;MQ=37.75;MQ0=5;MQRankSum=-1.956;QD=4.58;ReadPosRankSum=-4.599;VQSLOD=0.9884;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:8,0:6:2.82:38,3,0	1/1:4,1:4:8.07:59,8,0	0/0:23,0:14:33:0,33,527	0/0:13,0:7:15.03:0,15,202	0/0:13,0:11:2.59:0,3,31	0/1:14,0:11:28.81:29,0,66	0/0:7,0:4:0.89:0,1,2	0/0:29,0:26:57.19:0,57,922	0/1:6,1:7:31.73:134,0,32	0/1:16,0:13:13.75:14,0,352	0/1:9,0:8:18.53:31,0,19	0/1:7,0:7:3.71:63,0,4	0/1:12,0:11:51.11:51,0,219	0/0:12,0:10:14.26:0,14,78	1/1:9,0:8:8.51:84,9,0	0/1:19,1:17:67.90:68,0,160	0/0:10,0:10:20.89:0,21,215	0/0:19,0:19:1.83:0,2,272	0/1:5,0:3:50.16:50,0,93	0/0:20,1:16:5.92:0,6,67	1/1:3,1:4:3.01:38,3,0	0/0:17,0:16:5.97:0,6,87	0/0:18,1:16:2.55:0,3,20	./.	1/1:18,0:15:9.03:114,9,0	0/1:11,0:9:99:102,0,118	0/1:13,1:13:11.59:12,0,93	0/0:10,0:10:7.27:0,7,143
chr10	28951468	.	TTTATCAC	T	1102.22	PASS	AB=0.964;AC=17;AF=0.315;AN=54;BaseQRankSum=-1.435;DP=373;FS=15.276;HRun=0;HaplotypeScore=197.0710;InbreedingCoeff=-0.3083;MQ=40.30;MQ0=3;MQRankSum=-0.166;QD=5.22;ReadPosRankSum=1.969;VQSLOD=1.2285;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:5:5.92:0,6,57	0/1:5,1:5:54.13:78,0,54	0/1:20,0:12:1.93:2,0,512	0/0:16,0:9:24.03:0,24,629	0/1:22,0:20:41.59:42,0,230	0/1:18,0:15:26.95:27,0,210	1/1:4,1:4:2.81:48,3,0	0/0:24,0:22:42.77:0,43,887	0/1:8,0:8:39.06:39,0,173	0/0:17,0:15:35.10:0,35,595	0/1:11,0:11:31.06:31,0,184	0/1:8,2:10:39.92:40,0,123	0/1:13,0:12:99:207,0,160	0/1:11,0:9:3.80:216,0,4	0/1:7,1:7:57.01:57,0,127	0/1:18,3:18:99:292,0,397	0/0:13,0:13:29.31:0,29,449	0/0:13,0:13:6.84:0,7,463	0/0:3,0:3:8.92:0,9,152	0/0:25,0:20:41.18:0,41,457	0/0:4,0:4:2.47:0,2,12	0/1:17,0:16:57.07:57,0,67	0/1:20,0:17:22.11:22,0,285	./.	0/0:20,0:17:33:0,33,463	0/1:16,0:15:84.03:84,0,381	0/0:18,0:17:31.73:0,32,603	0/1:5,0:5:12.08:12,0,78
chr10	28951472	.	TCAC	T	1568.40	PASS	AB=0.903;AC=24;AF=0.444;AN=54;BaseQRankSum=-1.294;DP=362;FS=8.583;HRun=0;HaplotypeScore=177.9731;InbreedingCoeff=-0.5130;MQ=38.25;MQ0=4;MQRankSum=-3.913;QD=4.98;ReadPosRankSum=-3.130;VQSLOD=1.5934;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:6,1:5:3:0,3,67	0/1:4,1:4:46.29:46,0,62	0/1:19,0:10:21.26:21,0,275	0/0:16,0:8:23.62:0,24,390	0/1:21,1:20:73.08:73,0,200	0/1:17,1:15:68.37:68,0,146	1/1:5,0:4:3.01:47,3,0	0/1:22,1:21:42.70:43,0,358	0/1:7,1:8:53.13:53,0,189	0/1:17,0:15:49.62:50,0,355	0/1:8,2:10:74.80:75,0,166	0/1:7,2:9:54.81:55,0,126	0/1:9,4:12:99:218,0,112	0/1:7,4:9:18.54:216,0,19	0/1:5,2:6:54.69:55,0,123	0/1:20,1:18:99:314,0,155	0/1:14,0:14:7.77:8,0,461	0/0:13,0:13:33.54:0,34,519	0/0:4,0:4:11.96:0,12,157	0/1:23,2:20:81.47:81,0,343	0/1:3,0:3:0:0,0,0	1/1:14,2:15:17.08:134,17,0	0/1:16,2:15:45.28:45,0,295	./.	0/1:17,3:17:12.65:13,0,441	0/1:14,2:15:66.12:66,0,317	0/1:15,0:14:38.37:38,0,376	0/0:3,2:5:3.01:0,3,68
chr10	28951473	.	CACCT	C	3387.21	PASS	AB=0.740;AC=20;AF=0.385;AN=52;BaseQRankSum=-4.610;DP=345;FS=0.000;HRun=0;HaplotypeScore=167.5614;InbreedingCoeff=-0.6065;MQ=38.81;MQ0=4;MQRankSum=-1.957;QD=11.97;ReadPosRankSum=-0.869;VQSLOD=2.7382;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:3,3:4:2.74:0,3,29	0/1:3,2:4:0.87:1,0,25	0/0:17,0:9:17.15:0,17,245	0/1:15,0:8:7.33:7,0,361	0/1:10,12:20:86.25:153,0,86	0/1:10,7:14:99:147,0,163	0/0:2,2:3:2.50:0,2,9	0/1:16,7:21:48.89:438,0,49	0/1:5,3:8:54.58:55,0,147	0/1:8,9:15:99:302,0,278	0/1:6,4:10:99:153,0,146	0/1:7,1:8:49.98:50,0,112	0/1:8,5:12:99:122,0,104	0/1:7,3:8:59.58:71,0,60	0/1:5,2:6:47.39:52,0,47	0/1:8,13:18:51.78:489,0,52	0/0:14,0:14:35.77:0,36,438	0/0:13,0:13:35.88:0,36,390	0/1:4,0:4:9.93:10,0,62	0/1:9,15:19:99:456,0,126	./.	0/1:3,12:15:3.78:211,0,4	0/1:8,9:15:99:139,0,126	./.	0/1:12,6:15:99:138,0,180	0/1:10,3:12:99:147,0,236	0/1:7,7:13:99:247,0,150	0/0:3,0:3:2.92:0,3,29
chr10	28951475	.	C	CCTAT	1014.36	PASS	AB=0.980;AC=18;AF=0.346;AN=52;BaseQRankSum=-2.125;DP=342;FS=0.000;HRun=0;HaplotypeScore=176.7721;InbreedingCoeff=-0.1262;MQ=38.63;MQ0=4;MQRankSum=0.847;QD=5.64;ReadPosRankSum=2.699;VQSLOD=2.0752;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:4:0.89:0,1,2	1/1:5,0:4:0.92:5,1,0	0/0:16,0:7:6.49:0,6,96	0/0:14,0:8:10.48:0,10,195	0/0:22,0:20:10.53:0,11,68	0/1:17,0:14:60.03:65,0,60	1/1:4,0:3:1.36:52,1,0	0/1:22,0:20:53.38:53,0,154	0/1:8,0:8:15.70:20,0,16	0/1:17,0:15:31.89:32,0,104	0/1:10,0:10:12.79:13,0,33	0/1:8,0:8:12.82:13,0,14	0/1:13,0:12:8.59:9,0,44	0/1:10,0:8:12.60:68,0,13	0/0:7,0:6:4.77:0,5,31	0/1:21,0:18:18.87:19,0,229	1/1:7,8:15:10.26:448,10,0	0/1:9,4:13:25.60:292,0,26	0/1:4,0:4:0.17:54,0,0	0/0:24,0:19:28.15:0,28,134	./.	0/0:16,0:15:0.08:0,0,47	0/0:18,0:15:12.23:0,12,62	./.	0/0:18,0:15:15.18:0,15,90	0/1:13,0:12:15.95:16,0,46	0/0:14,0:13:19.98:0,20,119	0/0:3,0:3:0.89:0,1,2
chr10	28951493	.	TGTC	T	3793.90	PASS	AB=0.842;AC=36;AF=0.667;AN=54;BaseQRankSum=2.473;DP=376;FS=41.812;HRun=0;HaplotypeScore=202.5846;InbreedingCoeff=-0.0454;MQ=35.32;MQ0=2;MQRankSum=-1.556;QD=10.84;ReadPosRankSum=5.352;VQSLOD=1.4825;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,1:4:3.01:55,3,0	1/1:4,1:4:6.49:86,6,0	0/0:9,0:6:1.55:0,2,125	0/0:12,0:7:14.79:0,15,285	1/1:22,10:30:20.35:262,20,0	0/1:16,0:14:0.06:104,0,0	0/0:3,0:3:2.91:0,3,19	0/1:22,4:20:99:262,0,156	0/1:9,0:10:7.21:89,0,7	0/1:24,1:23:99:129,0,141	1/1:11,2:13:20.54:155,21,0	1/1:12,0:12:8.39:56,8,0	1/1:9,0:8:14.27:81,14,0	0/1:7,1:8:19.10:27,0,19	1/1:4,2:5:10.56:130,11,0	0/1:18,4:20:4.97:262,0,5	0/1:14,1:15:29.55:30,0,326	0/1:8,2:10:80.84:81,0,227	0/1:1,2:4:26.05:99,0,26	1/1:25,8:28:35.82:447,36,0	./.	1/1:16,2:17:13.76:67,14,0	1/1:11,7:16:26.71:353,27,0	0/1:1,2:2:0:0,0,0	1/1:9,9:17:28.61:427,29,0	1/1:10,2:12:3.29:177,3,0	0/1:14,8:20:98.08:366,0,98	0/1:2,1:2:46.52:47,0,79
chr10	28951507	.	C	CT	2722.03	PASS	AB=0.773;AC=24;AF=0.444;AN=54;BaseQRankSum=2.058;DP=444;FS=5.681;HRun=1;HaplotypeScore=262.1341;InbreedingCoeff=-0.5008;MQ=34.48;MQ0=2;MQRankSum=-3.181;QD=7.28;ReadPosRankSum=0.730;VQSLOD=0.7044;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,1:4:4.82:53,5,0	0/1:7,1:7:5.49:44,0,5	0/0:11,1:6:18.02:0,18,221	0/0:7,0:2:6.01:0,6,60	0/1:29,9:36:99:167,0,109	0/1:13,9:19:99:145,0,197	1/1:3,1:3:3.01:31,3,0	0/1:19,6:17:99:141,0,455	0/1:11,4:14:84.77:153,0,85	0/1:28,6:32:99:115,0,677	0/1:16,4:20:99:129,0,117	0/1:7,4:11:33.21:86,0,33	0/1:7,4:9:99:108,0,100	0/1:3,3:4:29.73:101,0,30	0/1:7,2:8:29.01:94,0,29	0/1:20,4:21:99:127,0,441	0/0:17,0:18:28.36:0,28,413	0/0:10,1:10:18:0,18,222	0/1:2,3:5:68.79:118,0,69	0/1:40,7:42:99:253,0,349	./.	0/0:21,1:21:10.78:0,11,169	0/1:15,6:19:99:224,0,103	0/1:2,1:2:0:0,0,0	0/1:11,9:19:99:307,0,99	0/1:7,8:15:99:206,0,217	0/1:21,6:25:99:235,0,346	0/1:2,1:2:38.60:39,0,73
chr10	28951521	.	TTTATCATCTAA	T	5285.27	PASS	AB=0.890;AC=17;AF=0.315;AN=54;BaseQRankSum=-6.352;DP=418;FS=40.261;HRun=0;HaplotypeScore=272.4736;InbreedingCoeff=-0.4426;MQ=35.59;MQ0=1;MQRankSum=-1.700;QD=15.73;ReadPosRankSum=0.063;VQSLOD=2.7844;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:4,0:3:11.72:100,0,12	0/1:6,3:8:6.84:316,0,7	0/0:14,0:11:33.11:0,33,1276	0/0:4,0:2:2.97:0,3,20	0/1:29,5:32:83.69:84,0,91	0/1:19,2:18:99:298,0,116	0/0:2,0:2:3.01:0,3,60	0/0:16,1:9:23.97:0,24,484	0/1:10,4:13:94.40:515,0,94	0/1:26,6:30:99:701,0,650	0/1:15,6:20:71.57:400,0,72	0/0:9,0:9:15.47:0,15,124	0/1:12,0:10:96.36:96,0,163	0/0:6,0:4:11.99:0,12,134	0/1:8,1:8:45.93:196,0,46	0/1:23,2:22:99:302,0,267	0/0:18,0:18:42.92:0,43,1185	0/1:10,1:10:1.30:1,0,586	0/0:6,0:5:15.05:0,15,336	0/1:42,4:41:99:1108,0,333	./.	0/1:14,4:17:79.19:190,0,79	0/1:18,1:17:99:182,0,128	0/0:2,1:2:0:0,0,0	0/1:18,1:18:99:283,0,154	0/1:14,1:15:71.87:72,0,432	0/1:23,4:25:99:441,0,612	0/0:3,0:2:5.16:0,5,25
chr10	28951531	.	A	ATCT	2533.89	PASS	AB=0.817;AC=27;AF=0.500;AN=54;BaseQRankSum=2.468;DP=407;FS=3.813;HRun=0;HaplotypeScore=272.4397;InbreedingCoeff=0.0314;MQ=34.39;MQ0=0;MQRankSum=-1.978;QD=7.70;ReadPosRankSum=3.327;VQSLOD=2.2593;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,1:3:2.84:14,3,0	1/1:8,2:9:9.29:78,9,0	0/0:16,0:13:33.10:0,33,561	0/0:4,0:3:3.01:0,3,56	1/1:23,11:33:2.69:32,3,0	0/1:17,4:20:29.85:163,0,30	0/0:2,0:1:3.01:0,3,55	0/0:13,0:8:20.85:0,21,160	1/1:9,4:12:1.03:146,1,0	0/1:17,12:28:34.83:824,0,35	1/1:14,7:19:11.90:108,12,0	0/0:5,5:10:2.74:0,3,26	0/1:9,2:9:32.63:33,0,82	0/0:5,0:4:8.85:0,9,90	1/1:7,4:10:5.85:46,6,0	0/1:18,4:21:23.83:250,0,24	0/0:18,0:18:25.42:0,25,243	0/0:9,0:8:2.10:0,2,128	0/1:7,0:4:11.55:12,0,72	0/1:23,22:45:9.60:212,0,10	./.	1/1:17,5:22:5.22:44,5,0	0/1:12,4:15:0.70:37,0,1	0/1:3,0:2:0:0,0,0	1/1:10,4:13:8.62:79,9,0	0/1:9,5:14:73.24:248,0,73	0/1:16,11:25:59.17:326,0,59	0/1:4,1:5:37.46:37,0,43
chr10	28951532	.	A	ATCTAT	5391.07	PASS	AB=0.859;AC=32;AF=0.593;AN=54;BaseQRankSum=0.532;DP=417;FS=16.992;HRun=0;HaplotypeScore=278.4659;InbreedingCoeff=0.1777;MQ=34.46;MQ0=0;MQRankSum=-1.879;QD=15.32;ReadPosRankSum=3.067;VQSLOD=2.9645;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:3,1:3:2.86:58,3,0	1/1:8,2:9:7.07:171,7,0	0/0:17,0:13:36.12:0,36,708	0/0:4,0:3:3.01:0,3,55	1/1:25,11:35:2.34:58,2,0	0/1:17,4:20:4.01:296,0,4	0/0:2,0:1:3.01:0,3,42	0/1:13,0:8:38.92:91,0,39	1/1:9,4:12:15.78:338,16,0	0/1:20,12:31:11.93:1379,0,12	1/1:14,7:19:11.43:233,11,0	0/0:5,5:10:2.70:0,3,35	0/1:9,2:9:50.24:67,0,50	0/0:5,0:4:5.22:0,5,47	1/1:7,4:10:5.42:119,5,0	1/1:18,4:21:2.16:437,2,0	0/0:18,0:18:25.73:0,26,354	0/0:9,0:8:14.96:0,15,179	0/1:8,0:5:31.09:31,0,61	1/1:25,22:47:5.80:581,6,0	./.	1/1:17,5:22:4.42:113,4,0	1/1:13,4:16:3.68:111,4,0	0/1:3,0:2:0:0,0,0	1/1:10,4:13:8.43:177,8,0	0/1:10,5:15:47.89:421,0,48	0/1:16,10:25:65.19:600,0,65	1/1:4,1:5:8.94:112,9,0
chr10	28951537	.	CTA	C	233.58	PASS	AB=0.831;AC=9;AF=0.180;AN=50;BaseQRankSum=2.544;DP=420;FS=13.778;HRun=0;HaplotypeScore=291.6494;InbreedingCoeff=-0.0679;MQ=32.49;MQ0=0;MQRankSum=-2.787;QD=1.58;ReadPosRankSum=-2.291;VQSLOD=0.7698;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:3:2.82:0,3,43	0/0:8,0:8:5.51:0,6,86	0/0:16,0:11:33.09:0,33,572	0/0:5,0:3:9.03:0,9,163	0/0:29,7:36:2.44:0,2,21	0/1:12,7:19:1.98:2,0,129	./.	0/1:13,1:9:21.84:22,0,288	0/0:13,0:12:17.46:0,17,179	0/1:31,5:35:58.70:59,0,644	0/0:20,2:20:11.89:0,12,124	1/1:8,2:10:2.96:43,3,0	0/0:10,1:10:11.93:0,12,113	0/1:5,1:5:6.74:37,0,7	0/0:9,2:10:5.72:0,6,86	0/1:17,4:21:29.12:29,0,160	0/0:18,0:18:27.09:0,27,494	0/0:7,1:7:15.05:0,15,262	0/0:7,0:4:11.94:0,12,148	0/0:44,5:49:24.60:0,25,364	./.	0/0:21,2:23:5.87:0,6,65	0/0:15,2:17:3.51:0,4,61	./.	0/0:10,5:15:9:0,9,109	0/1:11,5:16:58.98:59,0,257	0/1:20,6:25:99:108,0,190	0/0:4,1:5:12.03:0,12,175
chr10	28951538	.	TATATCTGTC	T	636.77	PASS	AB=0.978;AC=11;AF=0.212;AN=52;BaseQRankSum=2.430;DP=416;FS=0.723;HRun=0;HaplotypeScore=322.9949;InbreedingCoeff=-0.1534;MQ=32.60;MQ0=0;MQRankSum=-2.466;QD=2.98;ReadPosRankSum=-1.504;VQSLOD=1.7825;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:3,0:2:2.96:0,3,19	0/0:8,0:8:2.38:0,2,139	0/0:16,0:11:33.11:0,33,1172	0/0:5,0:3:9.03:0,9,348	0/0:33,3:36:2.02:0,2,44	0/1:19,0:19:10.68:11,0,203	./.	0/0:13,0:9:21.04:0,21,811	0/0:13,0:12:12.68:0,13,198	0/1:35,1:36:99:202,0,1793	0/0:20,1:19:11.87:0,12,187	0/0:10,0:10:2.58:0,3,12	0/1:11,0:10:28.81:29,0,206	1/1:5,0:5:6.01:89,6,0	0/0:11,0:10:1.17:0,1,56	0/1:21,0:21:76.57:77,0,199	0/0:18,0:18:25.75:0,26,991	0/0:8,0:7:15.05:0,15,620	0/1:7,0:4:11.14:11,0,373	0/1:46,2:48:91.71:92,0,467	./.	0/1:23,1:24:0.64:1,0,91	0/0:16,1:17:2.44:0,2,93	0/0:2,0:2:0:0,0,0	0/0:14,1:15:3.78:0,4,99	0/1:16,1:17:99:102,0,545	0/1:25,1:25:99:154,0,307	0/0:5,0:5:4.61:0,5,386
chr10	28951539	.	A	ATC	1147.77	PASS	AB=0.940;AC=29;AF=0.580;AN=50;BaseQRankSum=3.613;DP=405;FS=1.352;HRun=0;HaplotypeScore=296.9389;InbreedingCoeff=0.1825;MQ=32.82;MQ0=0;MQRankSum=-4.040;QD=3.46;ReadPosRankSum=5.102;VQSLOD=1.4546;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:3,0:2:0.89:0,1,2	1/1:8,0:8:4.19:17,4,0	0/0:15,0:11:33.08:0,33,480	0/0:5,0:3:9.03:0,9,136	1/1:34,2:36:1.59:7,2,0	1/1:17,0:18:14.46:110,14,0	./.	0/0:10,0:8:10.66:0,11,212	0/1:11,0:11:2.84:29,0,3	0/1:34,1:35:99:406,0,141	1/1:21,0:19:1.67:12,2,0	1/1:9,0:9:1.92:6,2,0	0/1:9,0:9:31.80:103,0,32	1/1:4,0:6:5.99:67,6,0	0/0:10,1:10:1:0,1,4	1/1:17,2:20:19.27:166,19,0	0/0:18,0:18:29.94:0,30,429	0/0:8,0:7:15.05:0,15,224	0/1:5,0:4:29.89:30,0,98	0/1:47,0:47:10.21:10,0,43	./.	1/1:21,2:23:2.74:18,3,0	1/1:16,1:17:2.14:10,2,0	./.	1/1:15,0:15:0.57:5,1,0	0/1:17,0:17:83.11:133,0,83	1/1:26,0:25:19.06:160,19,0	0/1:5,0:5:10.32:10,0,114
chr10	28951565	.	CATCT	C	189.25	PASS	AB=1.000;AC=8;AF=0.174;AN=46;BaseQRankSum=-1.492;DP=341;FS=15.853;HRun=0;HaplotypeScore=243.5741;InbreedingCoeff=0.5198;MQ=29.73;MQ0=10;MQRankSum=0.077;QD=4.51;ReadPosRankSum=-1.636;VQSLOD=1.0668;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:3:2.68:11,3,0	0/0:10,0:10:11.95:0,12,152	./.	./.	0/0:34,0:32:2.47:0,2,17	0/1:12,0:11:3.13:3,0,100	./.	0/0:23,0:16:30.10:0,30,534	0/0:9,0:8:10.85:0,11,121	0/0:28,0:27:51.17:0,51,954	0/0:22,0:20:11.52:0,12,68	0/1:7,0:7:0.05:0,0,0	0/0:6,0:5:8.96:0,9,113	0/0:3,0:3:3.01:0,3,46	0/0:7,0:7:2.68:0,3,38	0/0:9,0:9:11.89:0,12,152	1/1:6,4:10:8.78:152,9,0	1/1:3,4:6:9.03:135,9,0	0/0:7,0:4:9.03:0,9,164	0/0:37,0:37:21.87:0,22,279	./.	0/0:20,0:19:14.09:0,14,121	0/0:12,0:12:8.71:0,9,73	./.	0/0:12,0:13:12.01:0,12,126	0/0:14,0:12:24.08:0,24,460	0/0:16,0:16:17.82:0,18,272	0/0:4,0:4:9.03:0,9,145
chr10	28951585	.	TGTCAATC	T	46.20	PASS	AB=0.926;AC=12;AF=0.231;AN=52;BaseQRankSum=-0.277;DP=270;FS=1.077;HRun=0;HaplotypeScore=191.1464;InbreedingCoeff=0.1424;MQ=27.78;MQ0=11;MQRankSum=1.487;QD=0.50;ReadPosRankSum=-3.906;VQSLOD=1.9760;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,0:4:1.76:5,2,0	0/1:7,0:8:1.98:2,0,69	0/0:9,0:1:3.01:0,3,121	0/0:6,0:3:9.03:0,9,262	0/0:23,2:24:0.35:0,0,3	0/1:12,0:9:0.95:1,0,10	./.	0/0:18,0:13:35.71:0,36,502	1/1:9,0:7:4.96:19,5,0	0/0:16,0:15:42.14:0,42,617	0/0:18,0:18:7.97:0,8,25	0/0:3,0:3:0:0,0,0	0/0:5,0:5:0.13:0,0,7	0/0:3,0:3:2.73:0,3,37	0/0:5,0:5:0.72:0,1,3	0/1:7,0:7:0.26:1,0,0	0/1:9,2:10:56.75:57,0,131	0/1:8,0:6:28.02:58,0,28	0/0:6,0:3:9.01:0,9,103	0/0:24,0:24:12.12:0,12,92	./.	0/1:17,0:16:5.76:6,0,12	0/0:10,0:10:2.12:0,2,16	0/1:3,0:3:0:0,0,0	0/1:9,0:10:5.21:5,0,24	0/0:10,0:9:21.54:0,22,340	0/0:9,0:10:9.05:0,9,91	0/0:3,0:3:9.03:0,9,118
chr10	28951607	.	CT	C	2329.22	PASS	AB=0.684;AC=36;AF=0.667;AN=54;BaseQRankSum=0.235;DP=287;FS=10.338;HRun=1;HaplotypeScore=166.3576;InbreedingCoeff=0.3348;MQ=26.95;MQ0=15;MQRankSum=-0.177;QD=9.47;ReadPosRankSum=0.481;VQSLOD=0.4091;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:9,4:13:3.87:0,4,23	1/1:3,6:9:13.85:122,14,0	0/0:3,0:1:3.01:0,3,48	0/0:7,0:3:9.03:0,9,137	1/1:13,17:27:9.17:44,9,0	0/1:7,7:9:36:70,0,36	0/1:1,0:1:0:0,0,0	1/1:10,7:9:23.52:271,24,0	1/1:5,3:7:2.64:29,3,0	0/1:12,10:19:4.84:348,0,5	1/1:9,9:16:14.08:101,14,0	0/1:0,4:4:0.01:0,0,0	1/1:0,5:5:6.01:73,6,0	0/1:2,7:9:23.66:24,0,44	1/1:3,4:6:5.82:64,6,0	0/0:4,3:5:0.34:0,0,1	0/1:6,5:10:55.66:56,0,62	0/0:6,0:5:12.03:0,12,145	1/1:1,3:3:9.03:116,9,0	1/1:6,10:16:15.04:131,15,0	./.	1/1:6,14:19:12.51:96,13,0	1/1:2,7:9:6.56:60,7,0	0/0:4,1:4:0:0,0,0	1/1:7,6:12:23.52:254,24,0	1/1:5,10:13:28.85:330,29,0	1/1:6,4:9:20.35:202,20,0	1/1:1,3:4:0.86:85,1,0
chr10	28951610	.	TCTAC	T	2219.17	PASS	AB=0.865;AC=37;AF=0.685;AN=54;BaseQRankSum=0.923;DP=295;FS=9.936;HRun=0;HaplotypeScore=173.9628;InbreedingCoeff=0.3183;MQ=26.86;MQ0=16;MQRankSum=0.706;QD=8.95;ReadPosRankSum=1.306;VQSLOD=2.4494;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:2:0,2,6	1/1:7,2:9:8.63:81,9,0	0/0:3,0:1:2.92:0,3,17	0/0:6,0:2:5.97:0,6,80	1/1:19,11:27:14.72:116,15,0	1/1:10,5:10:7.53:96,8,0	1/1:3,0:2:1.82:5,2,0	1/1:16,1:9:17.84:149,18,0	1/1:8,0:7:3.21:9,3,0	1/1:16,6:19:2.05:297,2,0	1/1:12,6:16:10.87:125,11,0	0/0:4,0:4:0:0,0,0	0/1:4,1:5:13.03:40,0,13	1/1:7,2:9:1.58:43,2,0	0/0:7,0:6:1.95:0,2,4	0/0:8,0:6:2.68:0,3,11	1/1:8,2:9:8.49:72,8,0	0/1:6,0:5:31.52:36,0,32	1/1:3,1:3:5.97:67,6,0	1/1:11,7:17:23.80:269,24,0	./.	1/1:15,6:19:12.81:113,13,0	1/1:4,6:10:8.39:98,8,0	0/0:5,0:4:0:0,0,0	1/1:8,5:12:17.18:197,17,0	0/1:11,5:14:67.64:217,0,68	1/1:7,3:9:16.88:166,17,0	1/1:1,3:4:11.99:159,12,0
chr10	28951611	.	CT	C	1599.89	PASS	AB=0.908;AC=27;AF=0.500;AN=54;BaseQRankSum=1.796;DP=302;FS=1.800;HRun=1;HaplotypeScore=175.4761;InbreedingCoeff=-0.0405;MQ=27.37;MQ0=17;MQRankSum=-1.812;QD=6.23;ReadPosRankSum=5.125;VQSLOD=0.7479;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:13,1:14:4.17:0,4,28	0/1:7,2:9:2.97:64,0,3	0/0:3,0:1:3.01:0,3,48	0/0:6,0:2:6.02:0,6,96	1/1:27,3:27:13.60:108,14,0	0/1:11,4:10:35.31:69,0,35	0/0:3,0:2:2.69:0,3,43	0/1:16,1:9:45.56:46,0,81	1/1:6,3:8:0.96:39,1,0	0/1:13,9:19:34.30:177,0,34	1/1:11,7:16:14.22:115,14,0	0/1:4,0:4:0:0,0,0	0/1:5,0:5:22.59:25,0,23	0/1:10,0:10:8.70:9,0,64	1/1:6,1:6:6.01:83,6,0	0/0:5,3:6:0.34:0,0,1	0/1:11,0:10:32.47:32,0,56	0/0:5,0:5:11.25:0,11,115	0/1:5,0:3:9.97:10,0,35	1/1:18,0:17:23.37:226,23,0	./.	1/1:19,2:19:13.96:128,14,0	0/1:10,1:11:15.75:29,0,16	0/0:4,1:4:0:0,0,0	1/1:11,3:13:22.08:277,22,0	0/1:15,1:14:64.88:124,0,65	0/1:6,5:10:1.02:145,0,1	0/1:4,0:4:7.77:44,0,8
chr10	28951614	.	C	CAT	577.07	PASS	AB=0.977;AC=32;AF=0.593;AN=54;BaseQRankSum=-0.275;DP=315;FS=0.000;HRun=0;HaplotypeScore=182.3303;InbreedingCoeff=0.1811;MQ=27.75;MQ0=19;MQRankSum=-1.255;QD=2.14;ReadPosRankSum=3.181;VQSLOD=2.4802;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:2.71:0,3,14	1/1:6,1:7:4.97:20,5,0	0/0:3,0:1:3.01:0,3,49	0/0:6,0:2:6.02:0,6,97	1/1:28,0:26:5.70:27,6,0	0/1:15,0:10:13.23:13,0,19	0/0:4,0:3:4.26:0,4,46	0/1:17,0:9:11.04:11,0,39	1/1:8,1:8:5.70:30,6,0	0/1:22,1:19:46.09:85,0,46	1/1:15,2:15:6.08:21,6,0	0/1:5,0:5:0.33:0,0,0	0/1:6,0:5:5.99:6,0,32	0/1:10,0:10:1.07:1,0,22	1/1:6,2:6:4.97:19,5,0	1/1:9,0:7:2.45:9,2,0	0/0:12,0:10:5.85:0,6,36	0/0:6,0:5:11.97:0,12,103	0/1:6,0:3:0.35:0,0,43	1/1:20,0:18:8.47:30,8,0	./.	1/1:21,1:21:11.83:58,12,0	1/1:11,0:11:3.14:11,3,0	0/1:5,0:4:0.13:0,0,0	1/1:10,4:13:18.03:91,18,0	0/1:13,3:15:70.49:197,0,70	0/1:12,0:11:5.16:28,0,5	1/1:7,0:7:2.31:69,2,0
chr10	28951624	.	TATC	T	2073.96	PASS	AB=0.984;AC=26;AF=0.520;AN=50;BaseQRankSum=-8.268;DP=368;FS=2.345;HRun=0;HaplotypeScore=183.3207;InbreedingCoeff=-0.8543;MQ=29.82;MQ0=21;MQRankSum=3.559;QD=5.79;ReadPosRankSum=0.306;VQSLOD=2.8264;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:12,7:19:24.27:24,0,217	0/1:5,0:5:19.54:29,0,20	./.	./.	0/1:35,0:34:99:247,0,128	0/1:17,0:11:60.68:63,0,61	0/1:7,0:6:30.26:30,0,158	0/1:27,0:17:7.79:8,0,394	0/1:13,0:12:69.52:153,0,70	0/1:21,1:19:75.76:76,0,116	0/1:20,0:18:24.90:25,0,40	0/1:5,0:5:39.86:40,0,52	0/1:8,0:6:15.15:15,0,72	0/1:11,0:11:97.82:98,0,168	1/1:7,0:5:6.02:76,6,0	0/1:12,0:10:51.07:101,0,51	0/1:13,1:12:51.75:52,0,73	0/1:6,0:5:8.45:62,0,8	0/1:13,0:9:68.28:68,0,186	0/1:19,0:17:35.59:141,0,36	./.	0/1:19,0:17:77.32:77,0,80	0/1:11,0:11:11.34:81,0,11	0/1:8,0:7:0.03:0,0,0	0/1:16,0:14:88.77:192,0,89	0/1:21,0:20:99:237,0,187	0/1:13,0:12:31.55:129,0,32	0/1:10,0:10:42.78:186,0,43
chr10	28951627	.	C	CT	2640.63	PASS	AB=0.694;AC=26;AF=0.520;AN=50;BaseQRankSum=-9.220;DP=390;FS=1.463;HRun=1;HaplotypeScore=182.6734;InbreedingCoeff=-0.8674;MQ=30.57;MQ0=21;MQRankSum=0.371;QD=6.93;ReadPosRankSum=2.424;VQSLOD=0.8302;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:15,3:19:46.57:47,0,151	0/1:2,3:5:19.56:39,0,20	./.	./.	0/1:23,14:35:90.62:269,0,91	0/1:9,8:11:58.38:58,0,61	0/1:5,2:6:32.92:33,0,109	0/1:28,2:18:8.34:8,0,319	0/1:3,12:14:56.09:162,0,56	0/1:14,11:22:99:167,0,170	0/1:7,14:19:32.87:33,0,41	0/1:2,6:8:35.82:38,0,36	0/1:7,2:7:43.71:81,0,44	0/1:9,3:12:94.24:94,0,120	1/1:5,4:7:6.02:95,6,0	0/1:1,11:10:29.33:125,0,29	0/1:9,5:12:37.85:38,0,77	0/1:4,3:5:19.94:85,0,20	0/1:10,3:9:65.15:65,0,161	0/1:9,10:17:30.45:142,0,30	./.	0/1:10,10:18:55.30:116,0,55	0/1:8,3:11:11.43:77,0,11	0/1:4,4:7:0.04:0,0,0	0/1:8,8:14:76.75:246,0,77	0/1:9,14:22:99:406,0,127	0/1:3,11:14:28.83:160,0,29	0/1:4,6:10:41.60:196,0,42
chr10	28951713	.	T	TCTAC	795.08	PASS	AB=0.825;AC=8;AF=0.148;AN=54;BaseQRankSum=2.236;DP=566;FS=13.568;HRun=0;HaplotypeScore=244.3562;InbreedingCoeff=-0.2025;MQ=36.95;MQ0=4;MQRankSum=-5.634;QD=4.42;ReadPosRankSum=-1.384;VQSLOD=0.7662;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:13:11.41:0,11,185	0/1:7,2:9:35.74:36,0,240	0/0:18,0:8:18.06:0,18,316	0/0:8,0:6:12:0,12,173	0/0:23,17:37:21:0,21,269	0/0:16,0:13:15.05:0,15,207	0/1:11,2:13:4.70:5,0,158	0/0:31,0:27:42.11:0,42,909	0/0:21,0:20:30.06:0,30,468	0/1:29,9:34:99:431,0,1041	0/1:19,5:21:17.82:18,0,293	0/0:20,0:17:27.09:0,27,428	0/0:24,0:20:36.04:0,36,575	0/0:14,0:13:24.06:0,24,403	0/0:20,0:18:33.11:0,33,516	0/0:24,0:22:38.82:0,39,597	0/0:14,0:12:13.59:0,14,211	0/0:15,0:12:26.31:0,26,308	0/0:15,0:10:27.01:0,27,438	0/1:16,17:31:99:141,0,379	0/0:5,0:4:6.02:0,6,114	0/0:22,8:28:1.38:0,1,480	0/0:21,7:24:1.43:0,1,267	./.	0/0:15,7:15:10.13:0,10,412	0/1:24,4:24:99:143,0,779	0/1:20,2:22:41.47:41,0,536	0/1:10,2:12:99:110,0,335
chr10	28951745	.	C	CT	4077.18	PASS	AB=0.744;AC=26;AF=0.464;AN=56;BaseQRankSum=8.633;DP=507;FS=113.268;HRun=1;HaplotypeScore=183.1837;InbreedingCoeff=-0.5857;MQ=35.70;MQ0=13;MQRankSum=-1.739;QD=9.50;ReadPosRankSum=4.381;VQSLOD=0.4604;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:11,3:13:99:112,0,214	1/1:2,3:5:9.02:115,9,0	0/0:25,0:8:24.08:0,24,329	0/0:15,0:6:15.05:0,15,210	0/0:15,11:22:11.90:0,12,166	0/1:13,5:16:99:158,0,260	0/1:6,5:10:10.36:10,0,151	0/1:37,2:26:6.29:6,0,542	0/1:10,8:17:99:235,0,165	0/1:24,10:34:99:371,0,750	0/1:15,10:23:99:142,0,135	0/1:10,7:14:71.71:302,0,72	0/1:9,8:13:99:195,0,141	0/1:9,4:10:82.46:82,0,177	0/1:7,8:13:46.50:288,0,47	0/1:11,6:14:87.11:122,0,87	0/1:10,2:10:67.50:67,0,113	0/1:10,6:14:41.37:164,0,41	0/1:6,2:7:77.84:78,0,150	0/1:11,14:24:65.96:167,0,66	0/1:7,2:7:77.84:78,0,150	0/1:10,12:21:95.55:285,0,96	0/1:15,12:22:99:193,0,102	0/0:10,2:11:11.93:0,12,168	0/1:9,6:10:62.52:218,0,63	0/1:16,9:20:99:308,0,364	0/1:15,7:21:99:190,0,234	1/1:0,4:4:12.04:191,12,0
chr10	28951770	.	C	CTAT	1104.69	PASS	AB=0.872;AC=9;AF=0.161;AN=56;BaseQRankSum=4.405;DP=567;FS=3.755;HRun=0;HaplotypeScore=201.8695;InbreedingCoeff=0.3587;MQ=38.24;MQ0=16;MQRankSum=0.144;QD=10.62;ReadPosRankSum=-3.202;VQSLOD=2.5171;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:18:21.61:0,22,241	1/1:4,3:7:0.68:86,1,0	0/0:18,0:4:12.04:0,12,223	0/0:11,0:5:11.45:0,11,179	0/0:32,0:29:26.73:0,27,241	0/0:20,0:18:38.79:0,39,343	0/0:17,0:16:32.46:0,32,251	0/0:51,0:38:84.35:0,84,834	0/1:14,7:20:7.07:324,0,7	0/0:45,0:43:99:0,111,1154	0/0:28,0:25:20.82:0,21,206	1/1:12,5:14:17.98:228,18,0	0/0:20,0:16:32.75:0,33,276	0/0:16,0:13:29.71:0,30,273	0/1:15,4:16:0.11:269,0,0	0/1:16,6:17:46.62:297,0,47	0/1:15,0:12:21.75:29,0,22	0/0:15,0:14:11.89:0,12,60	0/0:9,0:8:20.49:0,20,146	0/0:24,0:23:32.73:0,33,333	0/0:11,0:9:26.76:0,27,211	0/0:16,0:16:33.02:0,33,317	0/0:27,0:22:26.75:0,27,248	0/0:14,1:13:17.65:0,18,157	0/0:15,0:11:13.13:0,13,179	0/0:30,0:25:42.31:0,42,453	0/0:24,0:23:38.40:0,38,450	0/1:3,0:3:11.99:12,0,20
chr10	28951771	.	C	CT	392.85	PASS	AB=0.765;AC=6;AF=0.107;AN=56;BaseQRankSum=1.716;DP=576;FS=0.602;HRun=0;HaplotypeScore=195.4171;InbreedingCoeff=0.2438;MQ=38.31;MQ0=16;MQRankSum=1.855;QD=4.57;ReadPosRankSum=-2.996;VQSLOD=3.0296;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:18:29.05:0,29,173	0/1:4,3:7:3.60:72,0,4	0/0:18,0:4:12.04:0,12,168	0/0:11,0:5:11.55:0,12,146	0/0:33,0:30:25.74:0,26,142	0/0:20,0:18:37.72:0,38,221	0/0:17,0:16:7.97:0,8,115	0/0:54,0:41:96.40:0,96,641	0/1:14,7:20:10.95:135,0,11	0/0:45,0:43:53.48:0,53,748	0/0:29,0:26:20.43:0,20,129	1/1:12,5:14:3.08:83,3,0	0/0:20,0:16:31.11:0,31,155	0/0:18,0:15:2.40:0,2,123	0/1:15,4:16:6.69:88,0,7	0/1:16,6:17:20.84:134,0,21	0/0:15,0:12:15.48:0,15,93	0/0:14,0:14:14.11:0,14,102	0/0:9,0:8:22.39:0,22,112	0/0:24,0:23:32.35:0,32,212	0/0:12,0:10:22.78:0,23,131	0/0:16,0:16:31.91:0,32,196	0/0:27,0:22:25.85:0,26,148	0/0:15,0:13:16.85:0,17,91	0/0:16,0:12:13.32:0,13,122	0/0:30,0:25:34.56:0,35,282	0/0:24,0:23:50:0,50,331	0/0:3,0:3:5.88:0,6,36
chr10	28951775	.	T	TATC	848.04	PASS	AB=0.966;AC=8;AF=0.143;AN=56;BaseQRankSum=8.914;DP=599;FS=4.458;HRun=0;HaplotypeScore=202.3357;InbreedingCoeff=-0.0802;MQ=38.78;MQ0=18;MQRankSum=-3.007;QD=5.11;ReadPosRankSum=-0.229;VQSLOD=2.0771;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:20:31.76:0,32,495	0/1:8,0:8:31.30:71,0,31	0/0:17,0:4:12.04:0,12,183	0/0:11,0:5:12.18:0,12,149	0/0:33,0:30:26.83:0,27,449	0/0:24,0:20:0.30:0,0,555	0/0:20,0:19:28.47:0,28,591	0/0:57,0:43:99:0,108,1416	0/1:21,0:20:34.29:188,0,34	0/1:48,0:46:80.93:81,0,1561	0/0:31,0:28:20.87:0,21,349	0/1:15,0:12:0.61:125,0,1	0/0:20,0:16:32.91:0,33,549	0/0:19,0:16:38.93:0,39,583	0/1:22,0:19:41.85:125,0,42	0/1:22,0:17:80.30:124,0,80	0/1:10,5:13:69.25:242,0,69	0/1:14,0:13:26.48:26,0,123	0/0:9,0:8:21.03:0,21,295	0/0:23,0:22:32.79:0,33,549	0/0:12,0:10:30.07:0,30,445	0/0:16,0:16:33.11:0,33,549	0/0:27,0:21:27.04:0,27,445	0/0:15,0:13:17.71:0,18,299	0/0:17,0:13:16.12:0,16,288	0/0:30,0:25:21.54:0,22,902	0/0:25,0:24:48.08:0,48,766	0/0:6,0:6:6.02:0,6,91
chr10	28952162	.	TGTCAA	T	24639.45	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=0.444;DP=496;FS=8.430;HRun=0;HaplotypeScore=115.6817;InbreedingCoeff=0.9536;MQ=80.59;MQ0=0;MQRankSum=-9.393;QD=53.33;ReadPosRankSum=6.329;VQSLOD=4.9769;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,37:37:99:2279,105,0	1/1:1,5:6:9:151,9,0	0/0:16,0:16:45.15:0,45,1296	0/0:18,0:18:49.32:0,49,1386	1/1:1,22:23:54.06:1036,54,0	1/1:0,9:9:27.09:586,27,0	1/1:0,10:10:27.09:586,27,0	1/1:5,18:23:51.16:1034,51,0	1/1:2,16:18:45.15:977,45,0	1/1:2,14:16:45.15:968,45,0	1/1:0,22:22:66.10:1297,66,0	1/1:0,17:17:48.16:1042,48,0	1/1:1,19:20:54.19:1172,54,0	1/1:0,23:23:69.24:1497,69,0	1/1:0,17:17:42.14:911,42,0	1/1:1,19:21:57.20:1238,57,0	1/1:1,29:30:66.14:1343,66,0	1/1:2,13:14:33.11:716,33,0	1/1:1,12:13:30.10:640,30,0	1/1:0,17:17:45.02:841,45,0	1/1:0,12:12:30.10:651,30,0	1/1:0,14:14:39.05:756,39,0	1/1:1,19:20:47.73:906,48,0	1/1:1,12:13:30.10:650,30,0	1/1:1,14:15:30.06:606,30,0	1/1:1,21:22:63.22:1368,63,0	1/1:1,21:22:54.14:1127,54,0	1/1:1,6:7:12.04:261,12,0
chr10	28952221	.	T	TAAAAA	15694.23	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=0.028;DP=562;FS=6.777;HRun=14;HaplotypeScore=214.7255;InbreedingCoeff=0.7133;MQ=60.80;MQ0=1;MQRankSum=-4.602;QD=29.72;ReadPosRankSum=-2.462;VQSLOD=0.6971;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:35,0:34:57.14:1276,57,0	1/1:4,0:5:9.03:220,9,0	0/0:18,0:15:7.02:0,7,126	0/0:11,0:14:8.02:0,8,59	1/1:39,1:39:43.80:862,44,0	1/1:16,0:15:21.07:426,21,0	1/1:14,0:14:21.07:472,21,0	1/1:23,1:28:33.06:625,33,0	1/1:20,0:22:39.13:931,39,0	1/1:16,0:16:24.08:503,24,0	1/1:24,1:25:42.14:869,42,0	1/1:13,0:13:21.07:512,21,0	1/1:20,1:21:24.08:574,24,0	1/1:29,0:28:24.08:574,24,0	1/1:26,0:26:39.13:921,39,0	1/1:23,1:22:30.08:680,30,0	1/1:28,0:28:27.90:617,28,0	1/1:10,0:10:15.05:357,15,0	1/1:19,1:19:24.08:565,24,0	1/1:35,0:35:46.69:967,47,0	1/1:6,0:6:3.01:75,3,0	1/1:21,0:21:30.10:693,30,0	1/1:15,0:15:18.06:377,18,0	1/1:11,0:11:15.05:360,15,0	1/1:12,0:12:18.04:392,18,0	1/1:24,0:24:35.46:734,35,0	1/1:24,0:25:48.16:1088,48,0	1/1:4,0:4:2.98:22,3,0
chr10	28952578	.	C	CT	23828.87	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-9.108;DP=679;FS=1.887;HRun=2;HaplotypeScore=64.1944;InbreedingCoeff=0.9958;MQ=91.03;MQ0=0;MQRankSum=-11.587;QD=38.19;ReadPosRankSum=6.026;VQSLOD=5.0179;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,29:31:84.28:1204,84,0	1/1:0,8:8:24.08:345,24,0	0/0:30,0:30:87.15:0,87,1042	0/0:25,0:25:54.17:0,54,660	1/1:0,24:24:60.20:863,60,0	1/1:1,32:33:81.27:1166,81,0	1/1:0,20:20:57.19:821,57,0	1/1:2,28:30:81.26:1147,81,0	1/1:0,26:26:75.25:1080,75,0	1/1:2,17:19:51.16:718,51,0	1/1:0,13:14:42.07:577,42,0	1/1:1,28:29:81.27:1165,81,0	1/1:0,27:27:72.24:1037,72,0	1/1:2,29:31:81.27:1166,81,0	1/1:3,30:33:75.25:1080,75,0	1/1:0,30:30:87.29:1253,87,0	1/1:0,26:26:69.23:993,69,0	1/1:0,8:8:24.08:346,24,0	1/1:0,18:18:54.16:744,54,0	1/1:0,22:22:63.18:880,63,0	1/1:1,35:36:99:1400,99,0	1/1:1,17:18:39.13:561,39,0	1/1:1,29:30:78.19:1098,78,0	1/1:0,33:33:90.30:1296,90,0	1/1:1,18:19:42.10:581,42,0	1/1:1,22:23:63.12:843,63,0	1/1:1,28:29:81.27:1162,81,0	1/1:0,7:7:21.07:302,21,0
chr10	28954276	.	C	CTG	133.77	PASS	AB=0.795;AC=12;AF=0.240;AN=50;BaseQRankSum=1.927;DP=103;FS=0.000;HRun=0;HaplotypeScore=46.2770;InbreedingCoeff=0.1268;MQ=53.95;MQ0=1;MQRankSum=-2.406;QD=3.72;ReadPosRankSum=2.673;VQSLOD=1.3799;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:5:8.94:0,9,67	1/1:1,0:1:1.25:3,1,0	./.	0/0:5,0:3:6.02:0,6,77	./.	0/0:5,0:5:5.01:0,5,27	1/1:4,0:4:3.35:12,3,0	0/0:7,0:6:7.88:0,8,142	1/1:2,0:2:0.89:2,1,0	0/0:2,0:2:6:0,6,71	0/0:1,0:1:0:0,0,0	0/1:6,1:7:38.51:41,0,39	0/1:5,2:7:26.28:26,0,124	0/0:6,0:6:6.21:0,6,67	0/0:5,0:5:1.47:0,1,30	1/1:2,1:3:4.56:43,5,0	0/0:5,0:5:8.97:0,9,89	0/0:1,0:1:3.01:0,3,47	0/0:3,0:3:6.02:0,6,82	0/0:2,0:2:2.51:0,3,7	0/0:5,0:5:2.65:0,3,35	0/0:2,0:2:0:0,0,0	0/0:4,0:4:2.66:0,3,20	./.	0/1:3,1:4:5.12:33,0,5	0/1:5,3:8:89.82:90,0,135	0/0:2,1:3:3.01:0,3,36	0/0:1,0:1:3.01:0,3,48
chr10	28954298	.	ACCG	A	265.87	PASS	AB=0.891;AC=21;AF=0.375;AN=56;BaseQRankSum=0.188;DP=186;FS=1.505;HRun=0;HaplotypeScore=40.0044;InbreedingCoeff=-0.0020;MQ=54.12;MQ0=3;MQRankSum=3.706;QD=2.83;ReadPosRankSum=-2.645;VQSLOD=0.3360;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:8,0:7:5.81:6,0,74	1/1:1,0:1:2.96:19,3,0	0/0:8,0:5:8.36:0,8,57	0/0:12,0:6:5.13:0,5,67	1/1:9,0:9:10.48:66,10,0	0/0:9,0:9:10.05:0,10,65	0/1:10,0:10:0.06:0,0,3	0/1:9,5:13:67.48:67,0,172	1/1:3,0:3:1.34:5,1,0	0/1:3,0:3:14.57:15,0,34	0/1:2,2:4:6.08:18,0,6	0/1:6,2:8:15.84:16,0,50	0/0:9,0:9:7.53:0,8,102	0/0:9,0:9:3.71:0,4,50	0/0:7,0:7:4.70:0,5,21	1/1:3,0:3:2.68:11,3,0	0/0:9,0:9:8.71:0,9,83	0/1:1,2:3:12.10:27,0,12	0/0:4,0:4:11.71:0,12,80	0/1:5,0:5:29.82:33,0,30	0/0:16,0:15:6.68:0,7,111	0/0:3,0:3:3.01:0,3,33	0/0:4,0:4:3.43:0,3,19	1/1:2,4:6:14.48:79,14,0	0/1:5,0:5:10.58:11,0,19	0/1:9,0:9:38.19:38,0,144	0/1:3,0:2:9.63:10,0,18	0/0:1,0:1:3.01:0,3,42
chr10	28954301	.	G	GTCA	3690.77	PASS	AB=0.560;AC=51;AF=0.911;AN=56;BaseQRankSum=0.259;DP=184;FS=39.998;HRun=0;HaplotypeScore=30.4662;InbreedingCoeff=0.2437;MQ=57.66;MQ0=3;MQRankSum=-0.133;QD=23.21;ReadPosRankSum=2.497;VQSLOD=1.0597;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,7:10:11.82:230,12,0	1/1:1,0:1:3.01:48,3,0	0/0:10,0:7:9.05:0,9,139	0/0:15,0:7:12.49:0,12,154	1/1:1,7:8:9.03:145,9,0	1/1:1,7:8:3.01:60,3,0	1/1:2,7:9:3.01:55,3,0	1/1:13,0:13:32.92:412,33,0	1/1:0,3:3:3.01:42,3,0	1/1:0,4:4:12.04:224,12,0	1/1:5,0:5:6.02:122,6,0	1/1:7,0:7:11.94:163,12,0	1/1:0,7:8:6.02:122,6,0	1/1:0,7:8:2.93:61,3,0	1/1:2,3:5:3.01:59,3,0	1/1:1,3:4:3:27,3,0	1/1:0,8:10:8.90:181,9,0	1/1:2,0:2:6.02:119,6,0	1/1:1,2:3:6.02:108,6,0	1/1:1,4:6:12.04:221,12,0	0/1:3,11:13:19.08:113,0,19	1/1:1,1:2:3.01:61,3,0	1/1:0,2:4:3.01:60,3,0	1/1:6,0:6:15.05:296,15,0	1/1:5,0:5:8.76:123,9,0	1/1:0,9:9:27.04:490,27,0	1/1:1,2:2:6:85,6,0	1/1:0,1:1:3.01:61,3,0
chr10	28955452	.	C	CT	6275.74	PASS	AB=0.545;AC=47;AF=0.839;AN=56;BaseQRankSum=-4.620;DP=304;FS=24.654;HRun=9;HaplotypeScore=40.4302;InbreedingCoeff=0.7395;MQ=70.12;MQ0=5;MQRankSum=-0.056;QD=25.51;ReadPosRankSum=0.223;VQSLOD=3.1687;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,12:14:30.08:332,30,0	1/1:0,3:3:9.02:100,9,0	0/0:9,0:7:11.94:0,12,97	0/0:7,0:5:11.96:0,12,96	1/1:2,5:7:12.03:133,12,0	1/1:2,10:12:24.06:265,24,0	1/1:0,4:4:9.02:100,9,0	1/1:8,31:39:67.17:955,67,0	1/1:0,3:3:9.02:100,9,0	1/1:3,9:12:3.98:259,4,0	1/1:3,14:17:39.10:429,39,0	1/1:0,9:9:27.07:298,27,0	1/1:0,6:6:15.04:164,15,0	1/1:0,5:5:15.04:166,15,0	1/1:0,7:7:21.06:232,21,0	1/1:0,3:3:9.02:100,9,0	0/0:21,0:21:53.98:0,54,468	0/0:21,0:21:50.99:0,51,443	1/1:5,13:16:39.11:431,39,0	0/1:1,5:6:8.01:148,0,8	1/1:1,4:5:9.02:100,9,0	1/1:2,5:7:15.04:166,15,0	1/1:0,9:9:21.06:232,21,0	1/1:0,7:7:21.06:232,21,0	1/1:0,8:8:21.06:232,21,0	1/1:2,11:13:10.04:339,10,0	1/1:1,8:9:18.05:199,18,0	1/1:5,17:22:51.14:564,51,0
chr10	28960177	.	AAGGAGG	A	18518.37	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=6.540;DP=537;FS=6.459;HRun=0;HaplotypeScore=133.9832;InbreedingCoeff=0.9497;MQ=60.96;MQ0=1;MQRankSum=-11.105;QD=41.15;ReadPosRankSum=4.413;VQSLOD=4.0812;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,13:16:12.04:268,12,0	1/1:2,9:11:24.08:535,24,0	0/0:23,0:23:57.17:0,57,1686	0/0:23,0:22:55.04:0,55,1519	1/1:1,24:25:34.47:739,34,0	1/1:0,14:14:18.06:401,18,0	1/1:1,13:14:15.05:334,15,0	1/1:6,18:24:54.17:1058,54,0	1/1:2,16:18:36.12:803,36,0	1/1:2,19:21:60.21:1319,60,0	1/1:3,22:25:48.03:929,48,0	1/1:1,15:16:39.13:869,39,0	1/1:2,16:18:45.15:1003,45,0	1/1:2,12:14:27.09:602,27,0	1/1:3,18:21:48.16:1068,48,0	1/1:2,19:21:54.19:1204,54,0	0/0:23,0:23:51.13:0,51,1522	0/0:17,0:17:42.14:0,42,1319	1/1:1,6:7:18.05:339,18,0	1/1:3,23:25:39.13:849,39,0	1/1:6,7:13:9.03:169,9,0	1/1:3,24:27:44.95:956,45,0	1/1:3,18:21:30.73:651,31,0	1/1:7,11:18:9.03:201,9,0	1/1:3,17:20:51.17:1137,51,0	1/1:1,23:24:66.23:1432,66,0	1/1:2,25:27:54.19:1204,54,0	1/1:1,8:9:21.07:449,21,0
chr10	28960259	.	CACAACAACAACAACAACA	C	27162.07	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=4.496;DP=441;FS=0.828;HRun=0;HaplotypeScore=236.8794;InbreedingCoeff=0.7109;MQ=69.00;MQ0=4;MQRankSum=-3.151;QD=74.01;ReadPosRankSum=5.780;VQSLOD=3.9355;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,4:15:24.08:751,24,0	1/1:6,5:11:19.70:835,20,0	0/0:25,0:17:15.05:0,15,488	0/0:42,0:32:42.08:0,42,1213	1/1:12,11:23:36.12:1583,36,0	1/1:10,9:20:36.12:1517,36,0	1/1:5,6:11:3.01:147,3,0	1/1:7,10:17:27.98:478,28,0	1/1:4,6:10:24.08:958,24,0	1/1:8,14:22:48.16:2130,48,0	1/1:6,11:17:39.09:1683,39,0	1/1:7,3:10:18.06:670,18,0	1/1:6,11:17:39.13:1698,39,0	1/1:4,3:7:15.05:624,15,0	1/1:4,4:8:18.06:752,18,0	1/1:9,8:17:36.12:1427,36,0	1/1:10,0:10:0.22:54,0,0	0/0:7,0:7:2.27:0,2,6	1/1:9,3:12:12.04:495,12,0	1/1:5,14:19:51.17:2188,51,0	1/1:4,6:10:3.01:72,3,0	1/1:6,6:12:24.07:983,24,0	1/1:7,8:15:32.16:1264,32,0	1/1:12,1:13:15.05:235,15,0	1/1:3,8:11:30.10:1261,30,0	1/1:9,9:18:36.12:1560,36,0	1/1:11,20:31:72.25:3063,72,0	1/1:6,5:9:15.05:733,15,0
chr10	28960553	.	T	TA	16749.37	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-4.438;DP=629;FS=4.968;HRun=8;HaplotypeScore=73.6318;InbreedingCoeff=0.9789;MQ=67.37;MQ0=1;MQRankSum=-6.370;QD=28.20;ReadPosRankSum=4.086;VQSLOD=5.2235;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,32:35:90.27:1038,90,0	1/1:0,15:15:36.02:395,36,0	0/0:20,0:20:45:0,45,403	0/0:15,0:13:27:0,27,246	1/1:6,21:27:66.15:733,66,0	1/1:5,26:31:75.22:863,75,0	1/1:2,18:20:51.15:589,51,0	1/1:10,26:36:81.10:894,81,0	1/1:3,19:23:51.15:584,51,0	1/1:4,33:38:71.70:1050,72,0	1/1:1,18:20:56.96:623,57,0	1/1:1,14:15:39.12:450,39,0	1/1:0,21:21:63.19:727,63,0	1/1:4,9:14:27.06:300,27,0	1/1:2,23:26:72.05:811,72,0	1/1:5,14:19:42.12:485,42,0	1/1:1,23:24:63.19:727,63,0	1/1:0,6:6:12.03:138,12,0	1/1:5,15:20:45.12:509,45,0	1/1:3,22:26:66.03:741,66,0	1/1:3,15:18:20.68:492,21,0	1/1:7,19:26:57.08:640,57,0	1/1:1,24:25:72.17:815,72,0	1/1:1,20:21:57.17:658,57,0	1/1:5,29:34:72.21:828,72,0	1/1:1,22:23:66.20:761,66,0	1/1:4,20:23:57.17:658,57,0	1/1:0,7:7:21.06:242,21,0
chr10	28961576	.	ATATT	A	728.88	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=2.071;DP=462;FS=5.520;HRun=0;HaplotypeScore=143.1764;InbreedingCoeff=0.9849;MQ=78.11;MQ0=0;MQRankSum=-5.844;QD=36.44;ReadPosRankSum=0.869;VQSLOD=3.2312;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:51.18:0,51,1339	0/0:7,0:7:21.07:0,21,504	0/0:13,0:12:30.10:0,30,809	0/0:14,0:14:39.13:0,39,956	0/0:17,0:17:48.16:0,48,1266	0/0:21,0:21:54.12:0,54,1340	0/0:19,0:19:54.19:0,54,1424	0/0:37,0:37:99:0,102,2620	0/0:13,0:13:33.08:0,33,825	0/0:20,0:20:60.17:0,60,1557	0/0:10,0:10:27.09:0,27,712	0/0:15,0:15:39.12:0,39,990	0/0:22,0:22:66.16:0,66,1660	0/0:13,0:13:36.12:0,36,932	0/0:16,0:16:48.12:0,48,1234	0/0:18,0:18:39.13:0,39,1019	1/1:1,10:11:24.08:454,24,0	1/1:0,9:9:21.07:395,21,0	0/0:14,0:14:39.13:0,39,1052	0/0:18,0:18:54.10:0,54,1307	0/0:8,0:8:24.08:0,24,617	0/0:8,0:8:24.08:0,24,648	0/0:10,0:10:21.07:0,21,531	0/0:10,0:10:27.09:0,27,725	0/0:19,0:19:57.15:0,57,1461	0/0:33,0:33:90.27:0,90,2337	0/0:38,0:38:99:0,99,2601	0/0:9,0:9:18.06:0,18,486
chr10	28961635	.	ATCTATCTATCT	A	451.12	PASS	AB=0.767;AC=2;AF=0.036;AN=56;BaseQRankSum=3.363;DP=489;FS=0.000;HRun=0;HaplotypeScore=185.3988;InbreedingCoeff=-0.0100;MQ=51.57;MQ0=15;MQRankSum=-4.117;QD=20.51;ReadPosRankSum=0.139;VQSLOD=2.6815;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:45.17:0,45,1378	0/0:7,0:7:9.03:0,9,218	0/0:24,0:10:30.09:0,30,427	0/0:23,0:10:26.78:0,27,463	0/0:15,0:15:27.09:0,27,888	0/0:18,0:18:39.13:0,39,1462	0/0:14,0:14:24.55:0,25,718	0/0:47,0:46:99:0,138,4586	0/0:19,0:19:27.08:0,27,934	0/0:21,0:20:60.18:0,60,2234	0/0:14,0:14:17.85:0,18,605	0/0:10,0:10:18.06:0,18,628	0/0:18,0:18:26.36:0,26,1004	0/0:7,0:7:18.06:0,18,604	0/0:18,0:18:24.08:0,24,697	0/0:13,0:13:9.03:0,9,415	0/1:6,5:11:13.64:392,0,14	0/1:9,2:11:78.77:148,0,79	0/0:23,0:15:42.14:0,42,1377	0/0:16,0:16:18.06:0,18,422	0/0:8,0:7:12.04:0,12,452	0/0:8,0:8:21.07:0,21,876	0/0:13,0:13:24.08:0,24,697	0/0:9,0:9:16.61:0,17,510	0/0:23,0:23:27.08:0,27,765	0/0:32,0:32:96.33:0,96,4023	0/0:24,0:24:50.76:0,51,1600	0/0:11,0:10:24.08:0,24,595
chr10	28961846	.	AC	A	154.14	PASS	AC=18;AF=1.000;AN=18;DP=11;FS=0.000;HRun=1;HaplotypeScore=4.1230;MQ=47.05;MQ0=0;QD=15.41;VQSLOD=3.0220;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	1/1:0,1:1:2.96:19,3,0	./.	./.	./.	1/1:0,1:1:2.94:18,3,0	./.	./.	./.	./.	1/1:0,1:1:3.01:37,3,0	./.	./.	1/1:1,0:1:2.98:22,3,0	./.	1/1:1,0:1:2.99:24,3,0	1/1:0,1:1:2.97:20,3,0	1/1:0,1:1:2.94:18,3,0	./.	./.	./.	./.	./.	./.	./.	1/1:0,2:2:5.96:44,6,0	1/1:1,0:1:2.99:23,3,0	./.
chr10	28962383	.	ATT	A	15554.31	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=3.314;DP=567;FS=6.646;HRun=8;HaplotypeScore=111.0715;InbreedingCoeff=0.9635;MQ=79.37;MQ0=0;MQRankSum=-7.840;QD=29.07;ReadPosRankSum=6.941;VQSLOD=4.0639;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,34:35:72.21:871,72,0	1/1:1,6:7:18.05:218,18,0	0/0:19,0:19:42.12:0,42,674	0/0:13,0:13:32.94:0,33,468	1/1:2,25:27:57.16:690,57,0	1/1:0,28:28:60.18:726,60,0	1/1:1,11:12:21.06:254,21,0	1/1:5,33:38:92.51:1061,93,0	1/1:1,16:17:39.12:472,39,0	1/1:4,15:19:47.03:570,47,0	1/1:2,18:20:54.16:653,54,0	1/1:1,8:9:24.07:291,24,0	1/1:2,14:16:42.12:508,42,0	1/1:1,16:17:45.14:544,45,0	1/1:2,18:20:45.14:544,45,0	1/1:0,14:14:39.12:472,39,0	1/1:1,22:23:54.16:654,54,0	1/1:0,19:19:54.17:652,54,0	1/1:6,10:16:39.09:452,39,0	1/1:5,22:27:60.17:726,60,0	1/1:1,14:15:32.79:399,33,0	1/1:3,25:28:75.23:908,75,0	1/1:3,21:24:60.13:726,60,0	1/1:1,19:20:54.16:654,54,0	1/1:2,28:30:69.51:836,70,0	1/1:2,21:23:64.43:766,64,0	1/1:1,27:28:66.20:799,66,0	1/1:0,3:3:9.03:109,9,0
chr10	28962569	.	A	AGTGTGTGT	6797.34	PASS	AB=0.910;AC=48;AF=0.889;AN=54;BaseQRankSum=1.508;DP=773;FS=1.999;HRun=0;HaplotypeScore=260.4918;InbreedingCoeff=0.2746;MQ=46.81;MQ0=28;MQRankSum=0.792;QD=9.05;ReadPosRankSum=1.475;VQSLOD=3.7182;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:37,0:39:0:0,0,0	1/1:7,0:7:0.89:2,1,0	0/1:66,0:15:5.28:5,0,35	0/1:65,0:17:3.83:4,0,178	0/1:17,0:19:0:0,0,0	1/1:28,0:30:5.93:102,6,0	1/1:30,0:28:9.59:102,10,0	1/1:31,0:29:35.32:942,35,0	1/1:24,0:27:6.01:134,6,0	1/1:31,0:31:24.08:781,24,0	0/1:16,0:21:0.24:0,0,0	1/1:13,0:16:8.98:223,9,0	1/1:22,0:22:9.03:233,9,0	1/1:21,0:23:3.01:42,3,0	1/1:25,0:28:6.02:159,6,0	1/1:20,0:25:9.50:258,10,0	1/1:15,0:20:9.03:264,9,0	1/1:6,2:9:4.57:128,5,0	1/1:21,0:21:9.03:277,9,0	1/1:24,0:26:2.92:104,3,0	1/1:22,0:20:2.26:43,2,0	./.	1/1:27,0:26:11:270,11,0	1/1:30,0:30:9.50:253,10,0	0/1:24,0:28:0.12:0,0,0	1/1:38,0:38:40.02:1275,40,0	1/1:30,0:29:37.01:957,37,0	1/1:15,0:14:9.03:237,9,0
chr10	28964179	.	ATGTGTGTGTGTG	A	5941.33	PASS	AB=0.822;AC=46;AF=0.920;AN=50;BaseQRankSum=4.257;DP=525;FS=1.439;HRun=0;HaplotypeScore=174.0149;InbreedingCoeff=0.0689;MQ=65.46;MQ0=10;MQRankSum=-2.281;QD=13.38;ReadPosRankSum=1.011;VQSLOD=4.0583;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:17,7:21:5.05:131,5,0	1/1:7,1:8:5.99:124,6,0	./.	./.	1/1:16,4:21:6.02:186,6,0	1/1:18,1:21:6.02:186,6,0	1/1:10,0:11:3.01:84,3,0	1/1:21,0:21:0.53:32,1,0	1/1:12,6:18:12.04:410,12,0	1/1:26,5:30:10.42:325,10,0	1/1:10,6:16:12.04:410,12,0	1/1:14,3:18:10.73:389,11,0	1/1:14,2:16:6.02:205,6,0	1/1:12,8:21:24.08:782,24,0	0/1:15,2:19:39.37:269,0,39	1/1:13,0:17:12.02:155,12,0	0/0:13,0:15:6.90:0,7,139	0/1:14,0:18:30.66:31,0,185	1/1:14,0:13:2.67:25,3,0	1/1:16,1:18:6.02:160,6,0	./.	1/1:14,4:18:5.93:119,6,0	1/1:14,1:15:3.01:102,3,0	1/1:15,3:17:2.69:102,3,0	1/1:19,4:25:18.06:537,18,0	1/1:15,1:17:6.01:186,6,0	1/1:19,7:26:21.07:704,21,0	1/1:7,4:12:9.03:288,9,0
chr10	28964852	.	A	AT	8161.03	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-4.424;DP=298;FS=2.928;HRun=5;HaplotypeScore=31.9268;InbreedingCoeff=0.5288;MQ=70.07;MQ0=1;MQRankSum=-0.672;QD=30.45;ReadPosRankSum=3.137;VQSLOD=4.7035;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,4:5:9.92:121,10,0	1/1:0,3:3:6.02:78,6,0	0/0:11,0:11:6.81:0,7,189	0/0:17,0:12:2.75:0,3,96	1/1:0,11:11:30.10:393,30,0	1/1:0,9:9:21.07:276,21,0	1/1:5,0:5:12.01:126,12,0	1/1:5,36:39:96.28:1225,96,0	1/1:0,6:6:18.06:237,18,0	1/1:2,5:7:15.05:197,15,0	1/1:0,9:9:24.08:315,24,0	1/1:1,8:9:18.06:237,18,0	1/1:1,5:6:15.04:184,15,0	1/1:0,3:4:5.71:78,6,0	1/1:0,3:3:9.03:118,9,0	1/1:2,0:2:3:26,3,0	1/1:6,33:39:93.29:1210,93,0	1/1:2,20:22:56.85:722,57,0	1/1:1,16:17:48.13:609,48,0	1/1:1,8:9:21.07:274,21,0	1/1:0,5:5:12.04:158,12,0	1/1:2,2:4:3.01:39,3,0	1/1:0,8:8:21.07:276,21,0	1/1:0,3:3:9.03:118,9,0	1/1:0,11:11:24.08:316,24,0	1/1:0,5:5:15.05:196,15,0	1/1:2,7:9:15.05:197,15,0	1/1:4,11:15:33.11:434,33,0
chr10	28965476	.	CTCTA	C	4150.03	PASS	AB=0.889;AC=31;AF=0.620;AN=50;BaseQRankSum=6.938;DP=652;FS=2.705;HRun=0;HaplotypeScore=107.7817;InbreedingCoeff=0.6899;MQ=65.56;MQ0=8;MQRankSum=-0.285;QD=10.27;ReadPosRankSum=0.156;VQSLOD=2.6542;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:34:1.54:16,2,0	0/0:4,0:4:6.02:0,6,139	./.	./.	1/1:21,16:37:32.89:465,33,0	1/1:17,0:24:3:28,3,0	1/1:17,8:25:6.02:91,6,0	./.	1/1:5,11:16:30.10:454,30,0	0/1:27,2:29:66.68:67,0,390	0/0:27,0:27:30.10:0,30,692	1/1:10,5:15:6.02:91,6,0	1/1:12,10:22:27.09:408,27,0	1/1:9,13:22:27.09:408,27,0	0/0:19,0:19:24.08:0,24,535	0/1:10,0:13:0:0,0,0	0/1:20,1:20:9.27:9,0,699	1/1:8,9:17:15:227,15,0	1/1:13,3:16:11.99:139,12,0	1/1:21,12:33:27.09:398,27,0	1/1:10,16:26:39.13:590,39,0	1/1:7,6:12:15.05:215,15,0	0/0:29,0:29:39.12:0,39,832	0/0:9,0:15:21.07:0,21,334	1/1:23,16:39:36.12:544,36,0	0/0:26,0:26:24.08:0,24,537	0/0:27,0:41:24.08:0,24,431	0/0:20,0:20:24.08:0,24,555
chr10	28965705	.	AT	A	701.82	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.361;DP=604;FS=5.495;HRun=9;HaplotypeScore=58.3023;InbreedingCoeff=0.9634;MQ=74.56;MQ0=0;MQRankSum=-0.945;QD=18.47;ReadPosRankSum=0.927;VQSLOD=3.7984;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,132,1504	0/0:5,0:5:12.03:0,12,130	0/0:14,0:14:36.10:0,36,401	0/0:18,1:18:11.61:0,12,348	0/0:24,1:25:41.73:0,42,725	0/0:26,0:26:75.22:0,75,865	0/0:12,0:12:33.09:0,33,371	0/0:29,0:29:72.20:0,72,814	0/0:26,0:26:72.20:0,72,822	0/0:34,0:34:96.28:0,96,1102	0/0:16,0:16:42.12:0,42,485	0/0:19,0:19:51.15:0,51,589	0/0:18,0:19:50.98:0,51,567	0/0:21,0:21:57.15:0,57,640	0/0:28,0:28:72.20:0,72,822	0/0:14,0:14:39.12:0,39,448	1/1:3,19:22:54.03:494,54,0	1/1:4,12:16:35.61:329,36,0	0/0:27,0:27:60.17:0,60,684	0/0:21,0:21:54.16:0,54,623	0/0:23,0:22:69.19:0,69,787	0/0:18,0:18:51.11:0,51,566	0/0:17,0:17:45.13:0,45,519	0/0:17,0:17:42.12:0,42,485	0/0:35,1:36:71.81:0,72,1069	0/0:20,0:20:54.16:0,54,623	0/0:26,0:27:69.02:0,69,765	0/0:7,0:7:18.05:0,18,208
chr10	28966617	.	GGCAAAT	G	27777.20	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=6.685;DP=583;FS=13.742;HRun=0;HaplotypeScore=157.5192;InbreedingCoeff=0.9900;MQ=63.70;MQ0=0;MQRankSum=-13.275;QD=54.90;ReadPosRankSum=2.318;VQSLOD=4.4738;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,28:32:75.26:1698,75,0	1/1:0,9:9:20.99:493,21,0	0/0:14,0:14:39.13:0,39,1033	0/0:10,0:10:26.95:0,27,618	1/1:2,22:24:51.17:1074,51,0	1/1:0,22:22:63.22:1477,63,0	1/1:4,20:24:54.19:1295,54,0	1/1:7,16:23:48.15:1105,48,0	1/1:0,18:18:42.14:975,42,0	1/1:1,27:28:78.22:1776,78,0	1/1:1,7:8:15.05:360,15,0	1/1:1,28:29:78.27:1873,78,0	1/1:2,28:30:72.25:1727,72,0	1/1:0,20:20:51.18:1224,51,0	1/1:2,30:32:87.30:2086,87,0	1/1:2,18:20:48.16:1153,48,0	0/0:33,0:33:96.31:0,96,3340	0/0:20,0:20:57.20:0,57,1924	1/1:3,18:21:54.18:1253,54,0	1/1:3,10:13:24.08:491,24,0	1/1:1,15:16:34.05:624,34,0	1/1:1,24:25:60.20:1299,60,0	1/1:3,20:23:48.16:1003,48,0	1/1:3,14:17:20.68:504,21,0	1/1:0,13:13:35.93:864,36,0	1/1:3,23:26:69.24:1635,69,0	1/1:4,22:26:60.20:1371,60,0	1/1:1,6:7:18.06:419,18,0
chr10	28967017	.	G	GACAC	2029.52	PASS	AB=1.000;AC=44;AF=0.815;AN=54;BaseQRankSum=-0.527;DP=625;FS=6.891;HRun=0;HaplotypeScore=197.4738;InbreedingCoeff=0.3640;MQ=78.19;MQ0=49;MQRankSum=-2.375;QD=4.20;ReadPosRankSum=-3.288;VQSLOD=1.3073;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:19:0.86:2,1,0	./.	0/0:58,0:38:28.76:0,29,629	0/0:67,0:41:25.50:0,26,536	1/1:18,0:14:4.17:33,4,0	1/1:36,0:30:6.01:136,6,0	1/1:24,0:21:7.77:51,8,0	1/1:20,0:20:3.22:55,3,0	0/1:19,0:17:5.91:38,0,6	1/1:19,0:19:28:236,28,0	0/0:15,0:14:0.44:0,0,1	1/1:20,0:19:2.64:13,3,0	1/1:18,0:13:9.02:129,9,0	1/1:23,0:21:2.95:70,3,0	0/1:20,0:18:0.02:0,0,0	1/1:20,0:17:9.41:90,9,0	1/1:21,1:19:27.78:384,28,0	1/1:7,16:22:9.03:221,9,0	1/1:17,0:14:9.71:74,10,0	1/1:11,0:8:2.22:7,2,0	1/1:28,0:21:2.80:14,3,0	1/1:23,0:20:11.99:112,12,0	1/1:17,0:16:2.26:24,2,0	1/1:17,0:16:8.87:91,9,0	0/1:10,0:9:0.01:0,0,0	1/1:23,0:20:20.41:154,20,0	1/1:18,0:15:5.70:96,6,0	0/1:15,0:12:4.36:126,0,4
chr10	28967030	.	AC	A	4385.86	PASS	AB=0.744;AC=29;AF=0.518;AN=56;BaseQRankSum=1.890;DP=568;FS=12.393;HRun=2;HaplotypeScore=137.8708;InbreedingCoeff=-0.6406;MQ=56.71;MQ0=59;MQRankSum=-3.698;QD=9.19;ReadPosRankSum=4.933;VQSLOD=1.3814;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:10,11:18:1.09:382,0,1	1/1:2,1:3:1.44:4,1,0	0/0:42,0:22:42.33:0,42,623	0/0:49,0:23:29.22:0,29,449	0/1:15,8:19:99:119,0,104	0/1:21,14:27:98.43:100,0,98	0/1:11,10:17:88.19:237,0,88	0/1:6,13:17:53.14:344,0,53	0/1:7,11:16:1.69:294,0,2	0/1:14,4:18:99:269,0,195	1/1:9,6:14:11.45:151,11,0	0/1:15,6:18:71.39:271,0,71	0/1:9,7:11:99:127,0,126	1/1:10,8:16:0.55:192,1,0	0/1:8,8:13:50.63:100,0,51	0/1:13,6:16:99:163,0,133	0/1:21,2:20:99:153,0,127	0/1:18,0:17:11.25:11,0,103	0/1:8,7:12:34.71:226,0,35	0/1:7,7:11:32.28:32,0,39	0/1:17,9:19:27.63:96,0,28	0/1:16,5:18:55.33:191,0,55	0/1:9,4:12:25.90:32,0,26	0/1:11,8:17:47.57:132,0,48	0/1:6,4:9:38.13:100,0,38	0/1:9,9:15:41.45:306,0,41	0/1:11,7:14:27.72:275,0,28	0/1:19,0:16:79.08:79,0,192
chr10	28967031	.	C	CA	4756.80	PASS	AB=0.857;AC=30;AF=0.536;AN=56;BaseQRankSum=2.112;DP=591;FS=5.947;HRun=1;HaplotypeScore=144.2457;InbreedingCoeff=-0.5827;MQ=54.56;MQ0=58;MQRankSum=-4.921;QD=9.46;ReadPosRankSum=4.247;VQSLOD=2.8130;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:18,5:20:0.89:382,0,1	1/1:4,0:4:2.50:9,2,0	0/0:40,0:21:42.33:0,42,623	0/0:48,0:22:29.22:0,29,449	0/1:20,2:19:77.30:119,0,77	0/1:29,5:26:63.11:98,0,63	0/1:18,4:18:61.98:247,0,62	0/1:29,0:27:35.77:448,0,36	1/1:16,2:16:9.25:304,9,0	0/1:15,5:20:99:353,0,162	1/1:10,5:14:10.37:149,10,0	0/1:16,6:19:66.53:271,0,67	0/1:13,3:11:99:146,0,99	1/1:16,2:16:14.92:216,15,0	0/1:14,3:14:50.89:100,0,51	0/1:16,4:17:99:163,0,105	0/1:21,1:20:78.06:165,0,78	0/1:16,0:15:27.23:27,0,71	0/1:19,1:17:28.68:253,0,29	0/1:11,3:11:32.01:32,0,35	0/1:25,3:22:27.86:96,0,28	0/1:16,7:20:23.03:191,0,23	0/1:12,1:12:17.45:32,0,17	0/1:18,2:18:47.90:132,0,48	0/1:7,3:9:33.70:100,0,34	0/1:16,1:15:21.33:367,0,21	0/1:11,7:14:27.25:274,0,27	0/1:12,7:16:83.03:83,0,130
chr10	28968180	.	A	AT	14954.30	PASS	AB=1.000;AC=51;AF=0.911;AN=56;BaseQRankSum=0.607;DP=479;FS=0.000;HRun=3;HaplotypeScore=65.0802;InbreedingCoeff=0.5204;MQ=64.51;MQ0=0;MQRankSum=-1.855;QD=31.75;ReadPosRankSum=3.461;VQSLOD=4.7970;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,36:36:96.32:1342,96,0	1/1:1,6:7:15.05:210,15,0	0/0:4,0:4:2.19:0,2,63	0/0:4,0:4:2.44:0,2,22	1/1:1,18:19:51.13:689,51,0	1/1:3,20:23:57.19:797,57,0	1/1:0,15:15:36.12:504,36,0	1/1:3,30:33:87.24:1149,87,0	1/1:1,9:10:24.08:336,24,0	1/1:0,17:17:51.17:713,51,0	1/1:1,10:11:24.01:312,24,0	1/1:4,16:20:35.99:503,36,0	1/1:2,19:21:51.17:713,51,0	1/1:0,19:19:54.18:755,54,0	1/1:2,17:19:42.14:587,42,0	1/1:0,17:17:39.13:546,39,0	0/1:22,0:22:82.90:86,0,83	1/1:13,0:13:22.34:80,22,0	1/1:1,18:19:57.14:729,57,0	1/1:2,12:14:32.89:369,33,0	1/1:0,12:12:33.11:462,33,0	1/1:0,18:18:36.03:478,36,0	1/1:0,13:13:39.02:519,39,0	1/1:0,15:15:42.14:587,42,0	1/1:2,17:19:42.14:587,42,0	1/1:2,25:27:72.18:936,72,0	1/1:4,23:27:63.21:880,63,0	1/1:3,2:5:6.02:84,6,0
chr10	28968183	.	T	TA	6024.34	PASS	AB=1.000;AC=50;AF=0.893;AN=56;BaseQRankSum=0.468;DP=460;FS=8.980;HRun=8;HaplotypeScore=96.5575;InbreedingCoeff=0.3736;MQ=64.58;MQ0=0;MQRankSum=-2.876;QD=13.18;ReadPosRankSum=6.584;VQSLOD=3.5309;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:39,0:39:51.23:476,51,0	1/1:6,0:6:14.55:86,15,0	0/0:3,0:3:6:0,6,55	0/1:4,0:4:1.66:2,0,21	1/1:19,0:19:46.78:284,47,0	1/1:20,0:20:55.08:303,55,0	1/1:14,0:14:34.53:183,35,0	1/1:33,0:33:49.43:336,49,0	1/1:9,0:9:23.15:126,23,0	1/1:17,0:17:48.26:241,48,0	0/1:10,0:10:1.37:90,0,1	1/1:17,0:17:34.50:184,35,0	1/1:19,0:19:48.91:260,49,0	1/1:20,0:20:52.10:288,52,0	0/1:19,0:19:0.94:171,0,1	1/1:17,0:17:37.41:199,37,0	1/1:6,17:23:48.14:554,48,0	1/1:1,11:12:27.08:312,27,0	1/1:19,0:19:22.82:181,23,0	1/1:13,0:13:5.61:107,6,0	1/1:12,0:12:31.92:177,32,0	0/1:17,0:17:4.03:165,0,4	1/1:13,0:13:35.10:210,35,0	1/1:15,0:15:40.50:221,41,0	1/1:17,0:17:40.77:240,41,0	1/1:25,0:25:36.09:283,36,0	1/1:26,0:26:20.66:314,21,0	1/1:2,0:2:5.83:33,6,0
chr10	28968769	.	A	AT	23626.32	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-8.289;DP=753;FS=4.424;HRun=6;HaplotypeScore=61.5255;InbreedingCoeff=0.9155;MQ=83.18;MQ0=0;MQRankSum=-8.604;QD=33.28;ReadPosRankSum=5.754;VQSLOD=4.5345;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,69:72:99:2406,193,0	1/1:0,8:8:24.08:302,24,0	0/0:19,0:20:51.11:0,51,518	0/0:23,0:22:45.52:0,46,446	1/1:1,30:31:90.25:1114,90,0	1/1:4,17:21:51.16:642,51,0	1/1:0,20:20:57.18:717,57,0	1/1:3,28:31:84.25:1042,84,0	1/1:0,24:24:69.18:850,69,0	1/1:3,23:26:69.22:865,69,0	1/1:4,15:19:42.13:528,42,0	1/1:3,17:20:51.16:642,51,0	1/1:2,22:24:66.21:830,66,0	1/1:2,20:22:60.19:755,60,0	1/1:2,27:29:69.21:855,69,0	1/1:0,43:43:99:1547,123,0	1/1:2,35:37:99:1245,99,0	1/1:6,24:30:36.12:762,36,0	1/1:2,27:29:81.24:1004,81,0	1/1:0,18:18:51.13:625,51,0	1/1:4,28:32:84.27:1057,84,0	1/1:5,20:25:54.17:679,54,0	1/1:1,11:12:33.11:415,33,0	1/1:1,35:36:99:1245,99,0	1/1:0,24:24:57.18:717,57,0	1/1:1,41:42:99:1535,123,0	1/1:0,34:34:96.05:1207,96,0	1/1:0,1:1:3.01:38,3,0
chr10	28969769	.	CTACGATGTCTGGCCAG	C	38881.08	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=6.991;DP=441;FS=5.013;HRun=0;HaplotypeScore=256.2058;InbreedingCoeff=0.9323;MQ=75.61;MQ0=0;MQRankSum=-8.720;QD=95.30;ReadPosRankSum=7.955;VQSLOD=3.9632;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:5,17:22:33.11:1502,33,0	1/1:2,6:8:18.06:862,18,0	0/0:20,0:20:54.19:0,54,2594	0/0:13,0:13:30.10:0,30,2009	1/1:4,20:24:57.20:2591,57,0	1/1:4,6:10:15.05:719,15,0	1/1:2,12:14:33.11:1581,33,0	1/1:9,12:21:36.11:1606,36,0	1/1:1,12:13:27.09:1293,27,0	1/1:2,10:12:27.09:1294,27,0	1/1:1,13:14:36.12:1724,36,0	1/1:2,16:18:48.16:2299,48,0	1/1:7,11:18:30.10:1435,30,0	1/1:0,15:15:42.14:2012,42,0	1/1:1,27:28:69.24:3305,69,0	1/1:3,19:22:48.16:2299,48,0	1/1:3,20:23:48.16:2236,48,0	1/1:8,8:16:21.07:1006,21,0	1/1:7,8:15:24.05:883,24,0	1/1:1,11:12:18.06:862,18,0	1/1:9,6:15:12.04:573,12,0	1/1:3,7:10:12.04:575,12,0	1/1:2,12:14:33.11:1580,33,0	1/1:2,8:10:20.63:895,21,0	1/1:2,17:19:42.14:2012,42,0	1/1:5,11:16:33.11:1581,33,0	1/1:2,13:15:33.11:1581,33,0	1/1:0,4:4:12.04:575,12,0
chr10	28970420	.	C	CGGG	15977.20	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-7.127;DP=533;FS=2.692;HRun=6;HaplotypeScore=78.0031;InbreedingCoeff=0.9210;MQ=94.48;MQ0=0;MQRankSum=-10.990;QD=33.36;ReadPosRankSum=6.057;VQSLOD=2.5115;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:9,19:31:42.10:784,42,0	1/1:0,8:9:15.05:311,15,0	0/0:30,0:30:78.08:0,78,1017	0/0:24,0:24:71.01:0,71,862	1/1:3,14:17:24.08:509,24,0	1/1:3,12:16:30.10:637,30,0	1/1:2,22:25:45.13:914,45,0	1/1:7,12:21:36.95:646,37,0	1/1:3,15:18:27.09:573,27,0	1/1:2,14:17:42.12:779,42,0	1/1:1,9:11:21.07:445,21,0	1/1:3,14:17:30.10:636,30,0	1/1:2,10:12:21.07:446,21,0	1/1:2,19:24:42.12:851,42,0	1/1:2,18:22:51.15:1043,51,0	1/1:2,15:19:48.14:979,48,0	1/1:1,0:26:26.16:59,26,0	1/1:0,0:21:22.43:50,22,0	1/1:2,5:8:18.04:304,18,0	1/1:2,15:19:39.04:739,39,0	1/1:5,14:23:40.36:792,40,0	1/1:4,13:18:15.05:313,15,0	1/1:2,20:23:22.68:508,23,0	1/1:4,16:20:36.12:764,36,0	1/1:0,14:16:30.10:637,30,0	1/1:2,20:25:63.13:1176,63,0	1/1:1,17:18:45.15:955,45,0	1/1:0,3:3:6.02:127,6,0
chr10	28970907	.	C	CT	24885.47	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-9.011;DP=678;FS=0.590;HRun=2;HaplotypeScore=61.8193;InbreedingCoeff=0.9901;MQ=88.27;MQ0=0;MQRankSum=-10.617;QD=39.50;ReadPosRankSum=5.148;VQSLOD=4.8749;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,36:37:99:1512,105,0	1/1:0,7:7:21.07:302,21,0	0/0:27,0:27:75.22:0,75,902	0/0:21,0:21:15.57:0,16,523	1/1:1,27:28:78.22:1100,78,0	1/1:0,28:28:78.26:1123,78,0	1/1:1,29:30:84.28:1210,84,0	1/1:1,38:39:99:1504,111,0	1/1:2,27:29:75.25:1079,75,0	1/1:1,24:25:72.23:1009,72,0	1/1:0,17:17:51.17:734,51,0	1/1:4,20:24:54.18:778,54,0	1/1:0,18:18:54.18:778,54,0	1/1:0,18:18:51.17:735,51,0	1/1:0,19:19:51.17:734,51,0	1/1:0,25:25:69.23:994,69,0	1/1:0,24:24:65.87:950,66,0	1/1:2,30:32:86.50:1213,87,0	1/1:1,16:17:48.15:674,48,0	1/1:1,27:28:78.26:1123,78,0	1/1:0,33:33:99:1426,99,0	1/1:0,17:17:45.15:649,45,0	1/1:1,22:23:60.20:853,60,0	1/1:0,32:32:87.29:1253,87,0	1/1:0,18:18:51.17:735,51,0	1/1:1,26:27:78.26:1121,78,0	1/1:1,22:22:63.21:907,63,0	1/1:0,11:11:27.09:389,27,0
chr10	28972592	.	TA	T	10144.58	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=1.582;DP=527;FS=0.000;HRun=10;HaplotypeScore=63.8793;InbreedingCoeff=0.9615;MQ=71.59;MQ0=1;MQRankSum=-1.186;QD=21.72;ReadPosRankSum=2.830;VQSLOD=5.7146;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,33:35:53.79:696,54,0	1/1:1,9:10:26.99:234,27,0	0/0:12,0:12:18.32:0,18,185	0/0:6,0:6:6.01:0,6,87	1/1:1,20:21:53.97:469,54,0	1/1:2,21:23:47.99:417,48,0	1/1:0,12:12:29.99:260,30,0	1/1:7,23:31:70.95:594,71,0	1/1:1,24:25:68.98:599,69,0	1/1:0,19:19:50.92:435,51,0	1/1:0,11:11:29.99:260,30,0	1/1:2,15:17:44.99:391,45,0	1/1:3,14:17:14.94:312,15,0	1/1:0,23:22:59.99:521,60,0	1/1:3,18:23:52.06:429,52,0	1/1:1,22:23:62.98:547,63,0	0/0:30,1:30:49.15:0,49,761	0/0:11,0:11:30.08:0,30,332	1/1:3,13:16:38.98:339,39,0	1/1:2,19:21:50.97:442,51,0	1/1:1,14:15:38.99:339,39,0	1/1:0,7:7:21:182,21,0	1/1:0,15:15:44.99:391,45,0	1/1:2,24:26:65.98:573,66,0	1/1:0,17:17:47.99:417,48,0	1/1:4,17:21:50.97:439,51,0	1/1:2,23:25:59.98:521,60,0	1/1:0,14:14:38.99:339,39,0
chr10	28972790	.	T	TAC	973.69	PASS	AB=1.000;AC=43;AF=0.860;AN=50;BaseQRankSum=-3.537;DP=557;FS=0.000;HRun=0;HaplotypeScore=103.6504;InbreedingCoeff=0.2771;MQ=68.67;MQ0=8;MQRankSum=3.287;QD=2.13;ReadPosRankSum=-1.310;VQSLOD=1.9697;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:35,0:36:8.67:62,9,0	./.	./.	./.	1/1:22,0:21:2.50:9,2,0	0/1:21,0:21:17.07:17,0,17	1/1:22,0:21:16.02:69,16,0	0/1:22,0:22:0:0,0,0	1/1:15,5:20:5.69:30,6,0	1/1:20,0:20:0.89:2,1,0	1/1:17,0:17:4.74:16,5,0	1/1:21,0:21:5.36:35,5,0	1/1:22,0:22:5.60:37,6,0	1/1:15,0:16:14.94:113,15,0	1/1:24,0:24:11.83:92,12,0	1/1:14,0:14:8.97:69,9,0	0/0:26,0:29:13.96:0,14,66	0/0:12,0:12:2.84:0,3,14	1/1:20,0:19:3.48:39,3,0	1/1:17,0:17:0.72:45,1,0	1/1:25,0:25:13.38:85,13,0	0/1:15,0:15:2.22:99,0,2	1/1:15,0:15:8.96:68,9,0	1/1:18,0:18:5.69:35,6,0	1/1:18,0:17:7.19:25,7,0	1/1:22,0:22:9.17:65,9,0	1/1:16,0:16:2.93:23,3,0	1/1:11,0:10:8.47:55,8,0
chr10	28972840	.	C	CTT	9414.02	PASS	AB=0.539;AC=46;AF=0.821;AN=56;BaseQRankSum=-1.384;DP=600;FS=23.012;HRun=0;HaplotypeScore=93.2274;InbreedingCoeff=0.4921;MQ=74.98;MQ0=13;MQRankSum=-2.587;QD=17.76;ReadPosRankSum=3.630;VQSLOD=3.2369;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:29,1:30:63.30:1040,63,0	1/1:5,0:5:12.04:202,12,0	0/0:24,0:16:35.95:0,36,657	0/0:38,0:26:39.03:0,39,922	0/1:3,9:14:0.44:231,0,0	1/1:25,1:25:22.30:921,22,0	1/1:1,26:27:18.06:366,18,0	1/1:1,22:23:63.21:1005,63,0	1/1:17,2:19:6.05:380,6,0	1/1:0,14:15:39.12:614,39,0	1/1:1,10:12:26.55:303,27,0	1/1:4,3:22:14.88:202,15,0	1/1:5,23:28:8.72:151,9,0	1/1:0,2:22:15.05:220,15,0	0/1:4,0:24:26.55:146,0,27	1/1:2,0:21:8.99:120,9,0	1/1:4,20:24:21.01:214,21,0	1/1:16,0:15:39.13:605,39,0	1/1:15,0:14:26.11:398,26,0	1/1:5,2:22:42.02:481,42,0	0/1:3,2:35:2.40:243,0,2	1/1:5,11:16:31.30:280,31,0	0/0:5,3:7:10.36:0,10,53	0/1:3,1:30:14.96:93,0,15	1/1:1,21:21:9.03:183,9,0	1/1:9,18:25:30.17:829,30,0	1/1:2,0:15:11.58:109,12,0	1/1:6,0:16:6.02:79,6,0
chr10	28974871	.	A	ATT	13732.24	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-3.420;DP=489;FS=2.222;HRun=10;HaplotypeScore=95.8864;InbreedingCoeff=0.9443;MQ=52.26;MQ0=3;MQRankSum=-4.826;QD=31.86;ReadPosRankSum=-0.586;VQSLOD=4.9226;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,23:27:69.19:997,69,0	1/1:3,9:12:27.09:402,27,0	0/0:11,0:8:15.01:0,15,151	0/0:10,0:9:5.73:0,6,60	1/1:4,9:12:24.08:357,24,0	1/1:5,10:15:39.08:531,39,0	1/1:2,9:12:26.58:367,27,0	1/1:9,13:22:51.15:722,51,0	1/1:4,11:15:38.62:543,39,0	1/1:7,13:21:54.15:745,54,0	1/1:6,16:24:48.15:681,48,0	1/1:5,10:15:39.03:510,39,0	1/1:9,12:21:42.11:590,42,0	1/1:6,12:18:39.13:574,39,0	1/1:6,15:21:51.14:729,51,0	1/1:3,12:15:39.13:575,39,0	0/0:19,0:18:45.08:0,45,458	0/0:18,0:17:42.09:0,42,426	1/1:7,9:16:36.12:535,36,0	1/1:11,15:29:65.61:856,66,0	1/1:4,2:6:11.98:130,12,0	1/1:10,10:21:48.08:633,48,0	1/1:5,13:18:45.07:620,45,0	1/1:4,6:11:20.56:278,21,0	1/1:8,13:21:54.14:765,54,0	1/1:10,13:24:47.59:636,48,0	1/1:13,13:27:56.87:780,57,0	1/1:1,3:4:12.04:176,12,0
chr10	28974901	.	T	TG	11896.41	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-1.248;DP=447;FS=2.325;HRun=3;HaplotypeScore=78.6158;InbreedingCoeff=0.7025;MQ=34.63;MQ0=28;MQRankSum=-2.765;QD=28.60;ReadPosRankSum=1.738;VQSLOD=4.2862;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,17:25:54.02:650,54,0	1/1:2,10:12:27.09:377,27,0	0/0:16,0:5:6.01:0,6,64	0/0:15,0:4:1.54:0,2,25	1/1:3,17:18:30.06:393,30,0	1/1:2,15:17:39.12:529,39,0	1/1:6,10:11:30.06:396,30,0	1/1:6,11:15:36.08:481,36,0	1/1:2,11:12:30.10:419,30,0	1/1:1,19:21:54.18:753,54,0	1/1:2,23:24:42.14:586,42,0	1/1:2,10:10:24.08:331,24,0	1/1:2,16:17:42.14:587,42,0	1/1:1,14:13:21.03:271,21,0	1/1:3,12:14:33.11:460,33,0	1/1:3,11:14:30.01:375,30,0	1/1:5,11:14:30.10:419,30,0	1/1:3,13:15:39.10:521,39,0	1/1:2,11:12:36.12:503,36,0	1/1:6,22:28:54.18:754,54,0	1/1:5,1:4:6.02:83,6,0	1/1:2,15:16:33.11:460,33,0	1/1:3,16:19:36.12:501,36,0	1/1:2,7:9:15.05:209,15,0	1/1:1,20:21:48.16:670,48,0	1/1:0,11:11:33.11:461,33,0	1/1:4,14:18:45.15:621,45,0	1/1:0,2:2:6.02:84,6,0
chr10	28974973	.	AT	A	11333.75	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-3.134;DP=524;FS=20.065;HRun=8;HaplotypeScore=62.0785;InbreedingCoeff=0.9248;MQ=65.45;MQ0=5;MQRankSum=-4.938;QD=23.42;ReadPosRankSum=4.463;VQSLOD=3.4633;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,31:32:84.13:811,84,0	1/1:0,8:8:24.04:232,24,0	0/0:22,0:17:14.81:0,15,399	0/0:18,0:15:8.72:0,9,346	1/1:2,26:28:69.11:666,69,0	1/1:2,18:20:51.08:492,51,0	1/1:2,18:18:45.07:434,45,0	1/1:5,24:28:66.05:619,66,0	1/1:0,10:10:27.04:261,27,0	1/1:0,16:16:48.08:464,48,0	1/1:7,17:23:42.06:405,42,0	1/1:0,20:18:45.07:435,45,0	1/1:1,11:12:30.05:290,30,0	1/1:5,9:12:27.04:261,27,0	1/1:2,12:13:36.06:348,36,0	1/1:1,9:10:27.04:261,27,0	1/1:1,19:19:51.08:492,51,0	1/1:1,24:25:66.11:637,66,0	1/1:4,15:18:45.07:434,45,0	1/1:2,23:25:60.09:579,60,0	1/1:2,12:14:33.05:319,33,0	1/1:7,13:19:36.05:348,36,0	1/1:2,17:19:42.06:406,42,0	1/1:0,4:4:9.01:87,9,0	1/1:4,22:26:60.09:579,60,0	1/1:1,24:25:72.11:695,72,0	1/1:1,21:22:57.09:550,57,0	1/1:0,8:8:24.04:232,24,0
chr10	28975846	.	TACACACACACAC	T	10158.75	PASS	AB=0.759;AC=43;AF=0.768;AN=56;BaseQRankSum=4.316;DP=748;FS=12.480;HRun=0;HaplotypeScore=294.6870;InbreedingCoeff=0.5259;MQ=57.44;MQ0=25;MQRankSum=-3.111;QD=15.97;ReadPosRankSum=2.007;VQSLOD=2.1388;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:25,3:28:80.39:294,0,80	1/1:8,11:20:18.02:544,18,0	0/0:23,0:22:9.03:0,9,145	0/0:31,0:27:15.01:0,15,278	1/1:10,22:32:4.34:20,4,0	0/1:13,16:29:8.96:99,0,9	1/1:7,15:23:9.03:293,9,0	0/1:24,13:33:9.94:612,0,10	1/1:11,20:31:32.85:576,33,0	1/1:16,17:35:56.69:1706,57,0	1/1:5,17:22:12.34:81,12,0	1/1:5,24:29:23.48:329,23,0	1/1:9,20:28:41.93:835,42,0	1/1:8,20:28:17.90:290,18,0	1/1:5,27:33:32.67:229,33,0	1/1:12,16:25:17.93:353,18,0	0/0:26,0:25:24.55:0,25,639	0/0:12,0:13:15.52:0,16,473	1/1:11,8:19:26.03:937,26,0	1/1:13,23:33:6.36:38,6,0	1/1:20,3:22:6.64:25,7,0	1/1:8,21:29:12.30:78,12,0	1/1:8,15:22:6.41:41,6,0	0/0:10,9:18:2.33:0,2,62	1/1:9,18:27:6.12:37,6,0	1/1:11,14:23:45.15:1331,45,0	1/1:8,25:32:47.99:1294,48,0	1/1:3,6:9:3.23:117,3,0
chr10	28976299	.	G	GCA	26988.39	PASS	AB=0.684;AC=46;AF=0.821;AN=56;BaseQRankSum=-12.849;DP=930;FS=6.603;HRun=0;HaplotypeScore=112.3901;InbreedingCoeff=0.4952;MQ=66.14;MQ0=1;MQRankSum=-2.570;QD=31.49;ReadPosRankSum=3.984;VQSLOD=7.1108;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,42:57:99:1939,121,0	1/1:4,12:16:33.11:536,33,0	0/1:36,1:34:8.28:8,0,370	0/0:31,0:29:48.89:0,49,549	1/1:7,23:30:32.30:1036,32,0	0/1:9,15:24:28.72:591,0,29	1/1:7,22:29:57.19:930,57,0	1/1:14,33:47:35:1548,35,0	1/1:7,30:37:53.37:1381,53,0	1/1:7,27:35:50.34:1306,50,0	1/1:4,15:19:42.14:673,42,0	1/1:6,39:45:62.42:1529,62,0	1/1:7,28:36:68.81:1125,69,0	1/1:6,31:37:19.45:1345,19,0	1/1:12,37:50:6.60:1644,7,0	1/1:7,43:50:77.46:1774,77,0	0/0:28,0:28:69.01:0,69,825	0/0:14,0:14:33.10:0,33,406	1/1:7,14:22:45.15:731,45,0	1/1:12,25:37:4.39:1100,4,0	0/1:14,28:42:99:1042,0,100	1/1:4,26:31:28.49:1079,28,0	1/1:5,11:19:33.10:504,33,0	1/1:7,27:34:34.91:1088,35,0	0/1:6,28:34:23.22:1185,0,23	1/1:11,34:44:65.90:1557,66,0	1/1:6,22:28:20.26:844,20,0	1/1:4,10:15:30.99:492,31,0
chr10	28977468	.	GTA	G	496.36	PASS	AB=0.957;AC=10;AF=0.185;AN=54;BaseQRankSum=-3.606;DP=437;FS=7.004;HRun=0;HaplotypeScore=139.7910;InbreedingCoeff=0.0654;MQ=58.70;MQ0=7;MQRankSum=0.457;QD=2.84;ReadPosRankSum=0.072;VQSLOD=1.9599;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,2:27:10.95:0,11,35	0/0:8,0:7:0.86:0,1,2	./.	0/0:7,0:5:2.97:0,3,11	0/0:28,2:30:13.12:0,13,29	0/0:18,1:19:2.91:0,3,7	0/0:12,0:12:0.38:0,0,1	0/1:37,0:34:22.41:241,0,22	0/0:16,0:16:4.02:0,4,9	1/1:14,2:16:7.52:114,8,0	0/0:24,0:23:2.67:0,3,6	0/0:8,0:8:2.81:0,3,16	0/0:13,1:14:9.50:0,10,37	0/0:9,1:10:2.96:0,3,7	0/0:14,1:15:1.34:0,1,3	0/0:9,0:9:4.67:0,5,17	0/0:17,0:17:10.24:0,10,47	0/1:11,0:11:21.75:22,0,39	0/1:17,3:20:93.81:105,0,94	0/1:17,1:17:0.31:6,0,0	0/1:9,0:9:8.96:32,0,9	0/0:5,0:5:0.09:0,0,1	0/0:10,2:12:0.38:0,0,1	0/0:8,1:9:0.47:0,0,1	0/1:29,3:32:8.73:19,0,9	0/1:22,2:24:32.17:71,0,32	0/0:17,0:17:0.70:0,1,17	0/1:8,0:8:2.16:9,0,2
chr10	28977502	.	G	GTGTGTA	2628.91	PASS	AB=0.969;AC=24;AF=0.462;AN=52;BaseQRankSum=1.373;DP=510;FS=15.944;HRun=0;HaplotypeScore=201.5907;InbreedingCoeff=-0.3393;MQ=42.02;MQ0=15;MQRankSum=-5.090;QD=6.11;ReadPosRankSum=3.750;VQSLOD=1.5422;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:29:20.86:75,0,21	1/1:9,0:8:5.88:36,6,0	./.	./.	0/0:28,0:28:16.61:0,17,160	0/1:18,1:18:3.22:16,0,3	0/1:13,0:13:12.62:13,0,38	0/1:56,0:52:25.51:659,0,26	0/0:10,2:12:2.97:0,3,20	0/1:23,0:21:19.52:437,0,20	0/1:19,4:21:0.04:0,0,83	0/1:8,1:9:1.09:1,0,17	0/1:16,1:16:42.56:128,0,43	0/0:8,1:10:0.66:0,1,28	0/1:13,1:14:35.04:41,0,35	1/1:8,1:9:10.57:146,11,0	0/1:23,0:23:44.80:49,0,45	0/1:25,0:25:39.89:183,0,40	0/1:22,0:22:4.28:507,0,4	0/1:21,0:20:35.41:36,0,35	0/1:20,0:17:5.58:19,0,6	0/1:13,0:13:16.03:43,0,16	0/0:17,0:17:5.97:0,6,44	0/1:17,0:18:0.65:35,0,1	0/1:21,1:22:84.11:84,0,87	1/1:22,0:22:6.15:166,6,0	0/1:21,1:22:98.93:99,0,142	0/0:9,0:8:5.38:0,5,53
chr10	28977508	.	GTA	G	515.74	PASS	AB=0.940;AC=20;AF=0.385;AN=52;BaseQRankSum=-3.518;DP=501;FS=7.303;HRun=0;HaplotypeScore=161.6720;InbreedingCoeff=-0.2970;MQ=41.71;MQ0=12;MQRankSum=0.906;QD=1.42;ReadPosRankSum=-1.139;VQSLOD=1.7162;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:31,0:30:85.87:86,0,144	0/0:8,1:8:5.31:0,5,23	./.	./.	0/1:24,1:25:5.62:6,0,118	0/1:18,0:17:0.86:1,0,41	0/1:6,7:13:31.46:31,0,41	0/1:49,0:48:77.37:77,0,366	0/0:10,0:10:2.74:0,3,12	0/1:22,0:20:20.51:21,0,208	0/1:22,1:21:15.34:15,0,60	0/0:10,0:10:5.74:0,6,37	0/1:14,1:14:30.05:30,0,88	0/0:10,0:10:2.99:0,3,25	0/1:13,1:14:11.91:12,0,41	0/1:8,0:8:4.92:5,0,21	0/0:23,0:23:19.07:0,19,182	0/0:27,0:27:17.19:0,17,250	0/1:20,0:20:99:120,0,126	0/0:21,0:21:4.43:0,4,168	1/1:23,1:21:13.45:104,13,0	0/1:12,1:13:6.57:7,0,19	0/0:19,0:19:5.91:0,6,48	1/1:16,2:18:8.58:87,9,0	0/1:19,1:20:3.18:3,0,146	0/1:20,0:20:35.13:35,0,326	0/1:12,8:20:18.05:18,0,144	0/1:9,0:8:2.25:2,0,103
chr10	28977510	.	A	ATGTGTGTATGTG	5335.68	PASS	AB=0.783;AC=44;AF=0.846;AN=52;BaseQRankSum=-3.519;DP=519;FS=0.804;HRun=0;HaplotypeScore=208.9490;InbreedingCoeff=0.5042;MQ=41.96;MQ0=12;MQRankSum=0.804;QD=12.24;ReadPosRankSum=0.735;VQSLOD=3.9204;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:31,0:31:26.59:349,27,0	0/1:3,6:12:0.08:0,0,0	./.	./.	0/1:23,0:23:3:112,0,3	1/1:17,0:17:11.20:113,11,0	1/1:13,0:13:3.01:32,3,0	1/1:51,0:50:90.34:1018,90,0	1/1:4,0:12:0.43:1,0,0	1/1:23,0:21:48.12:786,48,0	1/1:7,11:21:2.44:10,2,0	1/1:4,0:10:0.47:1,0,0	1/1:15,0:15:12:232,12,0	1/1:10,0:11:2.94:18,3,0	1/1:4,9:14:3:62,3,0	1/1:4,0:8:6.46:49,6,0	0/0:23,0:24:15.46:0,15,366	0/0:28,0:28:40.95:0,41,444	1/1:20,0:20:35.64:729,36,0	1/1:21,0:21:23.27:221,23,0	1/1:26,0:23:11.63:118,12,0	1/1:3,11:15:3.01:54,3,0	0/0:5,0:18:0:0,0,0	1/1:18,0:18:7.73:114,8,0	1/1:21,0:22:18.26:309,18,0	1/1:20,0:20:50.97:542,51,0	1/1:17,0:17:18:335,18,0	1/1:9,0:8:17.55:128,18,0
chr10	28977516	.	G	GTA	1574.62	PASS	AB=0.992;AC=30;AF=0.577;AN=52;BaseQRankSum=4.700;DP=525;FS=13.555;HRun=0;HaplotypeScore=143.9067;InbreedingCoeff=-0.3721;MQ=40.75;MQ0=13;MQRankSum=-0.697;QD=3.55;ReadPosRankSum=2.200;VQSLOD=2.2231;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:30,2:31:90.55:132,0,91	1/1:12,0:11:5.42:24,5,0	./.	./.	0/1:22,0:22:29.96:57,0,30	0/1:21,0:20:34.03:34,0,71	0/1:13,0:13:10.59:11,0,18	0/1:49,0:48:99:359,0,262	1/1:11,0:11:2.74:12,3,0	0/1:21,0:19:99:115,0,102	1/1:20,0:18:4.63:25,5,0	0/1:10,0:10:6.16:6,0,19	0/1:13,0:12:6.48:30,0,6	0/1:12,0:12:12.10:12,0,19	0/1:13,0:13:15.01:15,0,18	1/1:8,0:8:11.25:65,11,0	0/0:24,0:24:15.20:0,15,80	0/0:28,0:28:23.79:0,24,160	0/1:19,0:19:99:148,0,108	0/1:21,1:22:49.31:154,0,49	0/1:28,0:25:3.23:3,0,90	1/1:15,0:15:2.80:13,3,0	0/1:16,0:16:0:0,0,0	0/1:20,0:20:24.96:25,0,54	0/1:19,1:20:83.55:84,0,89	0/1:21,0:21:61.86:227,0,62	0/1:16,0:15:43.17:58,0,43	1/1:9,0:8:13.77:114,14,0
chr10	28977849	.	CA	C	20811.60	PASS	AB=1.000;AC=49;AF=0.875;AN=56;BaseQRankSum=1.236;DP=769;FS=1.015;HRun=5;HaplotypeScore=79.5273;InbreedingCoeff=0.8238;MQ=79.20;MQ0=0;MQRankSum=-4.611;QD=29.23;ReadPosRankSum=2.698;VQSLOD=5.4295;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,52:55:99:1668,147,0	1/1:1,13:14:39.11:442,39,0	0/1:18,0:18:17.89:18,0,419	0/0:21,0:21:42.13:0,42,524	1/1:0,23:23:57.16:646,57,0	1/1:2,26:28:78.22:885,78,0	1/1:1,22:23:66.19:749,66,0	1/1:1,40:41:99:1351,120,0	1/1:1,26:27:72.21:817,72,0	1/1:4,32:36:93.23:1034,93,0	1/1:1,15:15:36.10:408,36,0	1/1:1,27:28:78.22:885,78,0	1/1:1,39:40:99:1259,111,0	1/1:2,28:30:81.23:919,81,0	1/1:0,28:28:78.22:885,78,0	1/1:2,34:36:99:1123,99,0	0/0:20,0:20:60.20:0,60,821	0/0:16,0:16:48.16:0,48,653	1/1:4,28:32:75.66:869,76,0	1/1:0,20:20:54.15:612,54,0	1/1:3,24:27:69.20:783,69,0	1/1:2,25:27:60.17:680,60,0	1/1:0,15:15:39.11:442,39,0	1/1:1,45:46:99:1395,123,0	1/1:2,16:18:39.11:442,39,0	1/1:2,31:33:93.24:1036,93,0	1/1:4,43:47:99:1361,120,0	1/1:1,3:4:9.03:102,9,0
chr10	28979905	.	AC	A	1296.19	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.857;DP=609;FS=0.000;HRun=6;HaplotypeScore=63.0793;InbreedingCoeff=0.9915;MQ=81.66;MQ0=0;MQRankSum=0.784;QD=23.57;ReadPosRankSum=1.952;VQSLOD=3.1138;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,111,1444	0/0:13,0:13:33.11:0,33,434	0/0:25,0:25:49.58:0,50,622	0/0:14,0:14:15.23:0,15,248	0/0:38,0:38:99:0,114,1491	0/0:14,0:14:33.09:0,33,419	0/0:20,0:20:48.16:0,48,630	0/0:20,0:20:48.14:0,48,602	0/0:23,0:23:63.20:0,63,826	0/0:18,0:18:44.33:0,44,612	0/0:18,0:18:51.14:0,51,639	0/0:19,0:19:54.18:0,54,705	0/0:27,0:27:75.23:0,75,972	0/0:16,0:16:42.12:0,42,537	0/0:19,0:19:57.18:0,57,737	0/0:24,0:24:66.21:0,66,868	1/1:3,32:35:84.21:902,84,0	1/1:2,18:20:48.12:516,48,0	0/0:15,0:15:36.12:0,36,470	0/0:20,0:20:57.19:0,57,750	0/0:26,0:26:72.22:0,72,931	0/0:26,0:26:72.21:0,72,919	0/0:13,0:13:30.10:0,30,395	0/0:15,0:15:45.13:0,45,576	0/0:21,0:21:57.19:0,57,749	0/0:29,0:28:84.26:0,84,1090	0/0:25,0:25:69.22:0,69,904	0/0:13,0:13:39.13:0,39,510
chr10	28981583	.	GTA	G	1493.96	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.628;DP=575;FS=11.708;HRun=0;HaplotypeScore=109.6254;InbreedingCoeff=0.9947;MQ=96.18;MQ0=0;MQRankSum=-3.705;QD=32.48;ReadPosRankSum=2.973;VQSLOD=5.4336;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:93.30:0,93,1637	0/0:14,0:14:36.12:0,36,648	0/0:31,0:31:81.21:0,81,1343	0/0:29,0:29:62.93:0,63,1242	0/0:21,0:21:57.20:0,57,1025	0/0:13,0:13:39.13:0,39,702	0/0:17,0:17:45.15:0,45,796	0/0:27,0:27:81.28:0,81,1444	0/0:27,0:27:78.27:0,78,1403	0/0:16,0:16:48.16:0,48,858	0/0:10,0:10:27.09:0,27,481	0/0:20,0:20:54.19:0,54,971	0/0:21,0:21:60.21:0,60,1071	0/0:28,0:28:78.27:0,78,1404	0/0:29,0:29:87.30:0,87,1566	0/0:30,0:30:84.29:0,84,1501	1/1:0,31:31:78:1092,78,0	1/1:0,15:15:39.09:524,39,0	0/0:11,0:11:30.10:0,30,540	0/0:23,0:23:69.24:0,69,1242	0/0:19,0:19:57.20:0,57,1021	0/0:19,0:19:54.15:0,54,913	0/0:11,0:11:33.11:0,33,594	0/0:20,0:20:60.21:0,60,1065	0/0:13,0:13:36.12:0,36,648	0/0:22,0:22:60.21:0,60,1077	0/0:20,0:20:57.20:0,57,1024	0/0:6,0:6:18.03:0,18,264
chr10	28982260	.	TACTAGG	T	1567.51	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.080;DP=726;FS=0.000;HRun=0;HaplotypeScore=149.0089;InbreedingCoeff=0.9963;MQ=81.07;MQ0=0;MQRankSum=-8.402;QD=42.37;ReadPosRankSum=1.081;VQSLOD=3.0345;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:72,0:72:99:0,217,7700	0/0:9,0:9:27.09:0,27,958	0/0:24,0:25:70.06:0,70,2087	0/0:15,0:15:44.74:0,45,1423	0/0:16,0:16:48.16:0,48,1798	0/0:23,0:23:69.24:0,69,2483	0/0:26,0:26:78.27:0,78,2818	0/0:26,0:26:78.27:0,78,2869	0/0:26,0:26:78.24:0,78,2552	0/0:22,0:22:66.23:0,66,2419	0/0:14,0:14:42.14:0,42,1572	0/0:29,0:29:87.30:0,87,3141	0/0:34,0:34:99:0,102,3735	0/0:25,0:25:75.26:0,75,2802	0/0:25,0:25:75.26:0,75,2596	0/0:24,0:24:72.25:0,72,2630	1/1:0,25:25:54.11:1165,54,0	1/1:0,12:12:21.07:523,21,0	0/0:22,0:22:66.23:0,66,2421	0/0:23,0:23:66.22:0,66,2362	0/0:43,0:43:99:0,129,4739	0/0:33,0:33:99:0,99,3466	0/0:26,0:26:75.26:0,75,2547	0/0:37,0:37:99:0,111,3951	0/0:23,0:23:66.23:0,66,2351	0/0:30,0:30:90.31:0,90,3332	0/0:33,0:33:99:0,99,3699	0/0:8,0:8:24.08:0,24,850
chr10	28982397	.	AC	A	1429.17	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.678;DP=781;FS=1.331;HRun=1;HaplotypeScore=75.2494;InbreedingCoeff=0.9999;MQ=88.10;MQ0=0;MQRankSum=-2.691;QD=37.61;ReadPosRankSum=0.979;VQSLOD=4.2037;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,108,1726	0/0:12,0:12:36.11:0,36,552	0/0:27,0:27:78.26:0,78,1208	0/0:29,0:29:84.06:0,84,1213	0/0:33,0:33:93.30:0,93,1461	0/0:19,0:19:54.18:0,54,863	0/0:23,0:23:69.21:0,69,1078	0/0:43,0:43:99:0,123,1900	0/0:24,0:24:72.25:0,72,1148	0/0:34,0:34:99:0,102,1603	0/0:17,0:17:48.16:0,48,765	0/0:25,0:25:75.23:0,75,1153	0/0:32,0:32:96.31:0,96,1509	0/0:30,0:30:90.31:0,90,1438	0/0:32,0:32:93.30:0,93,1455	0/0:33,0:33:99:0,99,1571	1/1:0,23:23:66.22:922,66,0	1/1:0,15:15:45.15:629,45,0	0/0:26,0:26:75.24:0,75,1177	0/0:30,0:30:90.29:0,90,1412	0/0:32,0:32:93.30:0,93,1458	0/0:34,0:34:99:0,102,1630	0/0:29,0:29:87.27:0,87,1342	0/0:30,0:29:84.29:0,84,1343	0/0:30,0:30:90.29:0,90,1413	0/0:28,0:28:84.27:0,84,1319	0/0:40,0:40:99:0,120,1915	0/0:15,0:15:45.11:0,45,669
chr10	28982667	.	A	AGCTATGCCTCTGG	2266.46	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=0.272;DP=767;FS=0.996;HRun=0;HaplotypeScore=286.7033;InbreedingCoeff=0.9671;MQ=85.59;MQ0=0;MQRankSum=-4.012;QD=61.26;ReadPosRankSum=-0.045;VQSLOD=2.7339;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,120,4334	0/0:9,0:9:27.09:0,27,1089	0/0:27,0:27:66.48:0,66,1605	0/0:23,0:23:24.86:0,25,1085	0/0:25,0:25:75.26:0,75,2805	0/0:26,0:26:75.26:0,75,2638	0/0:30,0:30:84.26:0,84,2983	0/0:30,0:30:81.26:0,81,2589	0/0:33,0:33:93.32:0,93,3569	0/0:29,0:29:84.27:0,84,2917	0/0:17,0:17:51.14:0,51,1702	0/0:39,0:39:99:0,111,4361	0/0:30,0:30:84.25:0,84,2923	0/0:21,0:21:57.18:0,57,2155	0/0:36,0:36:99:0,108,4003	0/0:30,0:30:87.30:0,87,3277	1/1:2,8:24:27.09:1785,27,0	1/1:0,3:13:9.03:596,9,0	0/0:24,0:24:66.23:0,66,2453	0/0:26,0:26:69.24:0,69,2628	0/0:52,0:52:99:0,151,6049	0/0:27,0:27:81.28:0,81,3029	0/0:19,0:19:51.17:0,51,1920	0/0:26,0:26:78.27:0,78,2934	0/0:32,0:32:96.29:0,96,3469	0/0:35,0:35:99:0,105,3920	0/0:34,0:33:99:0,99,3591	0/0:10,0:10:30.10:0,30,1210
chr10	28983312	.	T	TA	1416.95	PASS	AB=0.979;AC=24;AF=0.462;AN=52;BaseQRankSum=8.785;DP=420;FS=102.479;HRun=1;HaplotypeScore=276.2498;InbreedingCoeff=-0.3821;MQ=25.70;MQ0=74;MQRankSum=-1.107;QD=4.11;ReadPosRankSum=-1.909;VQSLOD=0.3332;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:26,2:19:54.84:55,0,83	0/1:9,0:9:13.27:39,0,13	./.	./.	0/1:20,0:20:27.89:65,0,28	1/1:13,1:10:4.72:108,5,0	1/1:10,1:5:0.44:1,0,0	0/0:10,0:4:12.04:0,12,156	1/1:13,1:11:21.09:204,21,0	0/0:21,0:21:3.68:0,4,372	0/1:16,0:15:51.26:51,0,83	1/1:9,0:7:3.92:33,4,0	0/1:20,1:18:99:127,0,101	0/1:19,0:13:57.36:110,0,57	0/1:15,0:14:99:131,0,123	0/0:5,0:4:0.88:0,1,2	0/1:18,1:12:38.64:70,0,39	0/1:10,1:6:29.90:30,0,58	0/1:6,0:3:3.59:4,0,30	0/1:28,0:24:65.90:66,0,119	0/0:9,0:4:1.78:0,2,6	0/1:15,0:13:33.73:83,0,34	0/1:22,1:21:78.34:78,0,89	0/0:15,1:14:0.92:0,1,5	0/1:29,0:26:99:158,0,107	0/1:21,1:17:51.58:52,0,251	0/1:16,0:14:55.35:96,0,55	0/0:10,0:8:22.83:0,23,245
chr10	28983318	.	TC	T	847.92	PASS	AB=0.978;AC=31;AF=0.596;AN=52;BaseQRankSum=8.116;DP=431;FS=111.308;HRun=1;HaplotypeScore=276.9733;InbreedingCoeff=-0.4748;MQ=25.72;MQ0=76;MQRankSum=-1.493;QD=2.03;ReadPosRankSum=-0.856;VQSLOD=-0.5922;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:27,1:19:16.04:16,0,79	1/1:10,0:10:12.88:92,13,0	./.	./.	0/1:20,0:20:22.54:23,0,50	0/1:14,1:11:13.13:43,0,13	0/1:13,1:6:0.63:1,0,1	0/0:13,0:7:17.73:0,18,171	1/1:14,0:11:10.37:42,10,0	0/1:25,1:25:99:262,0,540	0/1:22,0:21:9.93:10,0,121	0/1:8,0:6:9.54:10,0,17	0/1:20,0:17:13.66:14,0,162	0/1:17,0:11:11.46:11,0,76	0/1:13,1:13:21.01:21,0,166	1/1:5,0:4:2.37:8,2,0	0/1:21,0:13:39.79:40,0,40	0/1:9,2:6:42.44:65,0,42	1/1:5,0:2:6:51,6,0	0/1:26,0:22:63.43:63,0,128	1/1:8,1:4:7.11:20,7,0	0/1:14,0:12:28.74:29,0,60	0/1:21,0:19:9.90:10,0,162	1/1:17,0:14:5.01:14,5,0	0/1:29,0:26:15.32:15,0,170	0/1:21,0:16:65.25:65,0,371	0/1:18,0:16:59.36:59,0,59	0/1:13,0:9:12.53:13,0,291
chr10	28983327	.	C	CT	3856.38	PASS	AB=0.802;AC=40;AF=0.769;AN=52;BaseQRankSum=-5.968;DP=414;FS=0.821;HRun=1;HaplotypeScore=245.8727;InbreedingCoeff=0.2844;MQ=25.60;MQ0=71;MQRankSum=-1.481;QD=10.65;ReadPosRankSum=3.352;VQSLOD=2.0226;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:22,3:16:29.32:29,0,75	1/1:1,9:10:5.51:49,6,0	./.	./.	1/1:15,9:25:3.80:171,4,0	1/1:11,2:10:9.89:50,10,0	0/0:9,4:5:2.04:0,2,12	1/1:18,0:12:3.02:58,3,0	0/0:7,7:11:4.11:0,4,32	1/1:6,21:26:51.93:962,52,0	1/1:3,16:18:8.29:139,8,0	1/1:5,3:6:10.26:58,10,0	1/1:9,10:16:13.27:151,13,0	1/1:6,9:9:5.10:92,5,0	1/1:3,12:14:18.24:238,18,0	0/1:1,2:2:0:0,0,0	0/1:16,4:13:10.48:21,0,10	0/1:9,1:6:15.07:29,0,15	1/1:1,2:3:7.57:85,8,0	1/1:15,7:21:6.61:178,7,0	0/0:8,1:4:2.64:0,3,8	1/1:6,3:7:13.56:74,14,0	1/1:4,17:19:12.41:187,12,0	0/0:12,4:13:0.51:0,1,3	1/1:2,16:16:18.63:239,19,0	1/1:8,13:15:25.98:551,26,0	1/1:7,16:21:9.08:175,9,0	1/1:4,9:9:21.07:321,21,0
chr10	28983328	.	A	AG	1860.77	PASS	AB=0.867;AC=32;AF=0.615;AN=52;BaseQRankSum=-5.648;DP=422;FS=5.446;HRun=0;HaplotypeScore=257.1349;InbreedingCoeff=0.1589;MQ=25.63;MQ0=71;MQRankSum=-1.339;QD=5.54;ReadPosRankSum=2.732;VQSLOD=2.8495;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,3:16:4.68:0,5,84	0/1:10,0:10:0.55:40,0,1	./.	./.	0/1:11,14:25:0.87:154,0,1	1/1:9,4:10:8.09:142,8,0	0/0:13,0:5:2.80:0,3,18	0/1:18,5:17:35.13:218,0,35	0/0:12,2:11:5.41:0,5,53	1/1:27,0:26:10.09:251,10,0	1/1:19,1:19:7.02:36,7,0	1/1:5,3:6:9.95:146,10,0	1/1:19,0:16:10.37:40,10,0	1/1:15,0:9:1.05:16,1,0	1/1:15,0:14:11.94:53,12,0	0/0:3,0:2:0.47:0,0,1	0/0:21,0:13:0.03:0,0,37	0/1:10,0:6:28.13:28,0,54	0/1:2,1:3:3.40:81,0,3	0/1:20,5:21:32.23:144,0,32	0/0:9,1:4:3.03:0,3,9	1/1:6,4:8:11.48:190,11,0	1/1:21,0:19:9.45:46,9,0	0/1:14,2:13:0.66:16,0,1	1/1:18,0:16:12.70:53,13,0	0/1:22,0:15:7.94:138,0,8	1/1:23,0:21:5.50:113,6,0	1/1:13,0:9:18.12:95,18,0
chr10	28983378	.	C	CT	5633.87	PASS	AB=0.854;AC=41;AF=0.759;AN=54;BaseQRankSum=-0.156;DP=460;FS=6.375;HRun=1;HaplotypeScore=272.1459;InbreedingCoeff=0.3314;MQ=38.58;MQ0=18;MQRankSum=-2.294;QD=13.74;ReadPosRankSum=2.814;VQSLOD=4.4215;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:9,4:11:2.13:0,2,41	1/1:8,3:11:6.86:65,7,0	0/1:9,0:10:19.79:20,0,214	0/0:3,0:1:3.01:0,3,41	1/1:9,19:28:4.26:210,4,0	1/1:3,15:18:14.88:196,15,0	./.	1/1:6,17:21:54.17:745,54,0	0/1:6,5:11:11.95:36,0,12	1/1:14,19:32:87.17:1173,87,0	1/1:4,19:23:7.27:94,7,0	1/1:3,8:11:9.03:143,9,0	1/1:11,10:18:9.48:135,9,0	1/1:8,6:13:6.02:86,6,0	1/1:6,17:23:12.03:164,12,0	1/1:3,9:12:8.98:107,9,0	0/0:12,1:8:6.49:0,6,84	0/0:6,2:5:2.29:0,2,7	1/1:1,1:2:5.91:63,6,0	1/1:10,23:32:4.15:144,4,0	0/1:6,1:3:33.50:38,0,34	1/1:4,11:15:12.98:193,13,0	1/1:4,15:19:9.50:137,10,0	0/0:5,1:5:0.47:0,0,1	1/1:10,15:23:9.97:132,10,0	1/1:4,21:23:65.45:843,65,0	1/1:9,24:33:41.28:519,41,0	1/1:2,9:10:27.09:391,27,0
chr10	28983386	.	TA	T	6722.83	PASS	AB=0.658;AC=42;AF=0.778;AN=54;BaseQRankSum=-1.066;DP=373;FS=5.684;HRun=1;HaplotypeScore=194.3544;InbreedingCoeff=0.5693;MQ=43.79;MQ0=10;MQRankSum=-4.212;QD=19.95;ReadPosRankSum=1.797;VQSLOD=4.8202;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:6,2:8:3.48:0,3,38	1/1:0,4:4:8.95:82,9,0	0/0:11,0:10:27.09:0,27,396	0/0:5,0:3:3.84:0,4,87	0/1:14,8:22:8.89:186,0,9	1/1:4,14:18:32.84:312,33,0	1/1:1,3:3:2.97:20,3,0	1/1:2,23:24:66.19:884,66,0	0/1:2,5:7:1.86:73,0,2	1/1:1,25:25:75.25:1043,75,0	1/1:0,20:20:21.71:182,22,0	1/1:0,10:10:17.89:163,18,0	1/1:6,12:16:23.38:226,23,0	1/1:1,9:9:11.95:123,12,0	1/1:0,17:17:32.80:291,33,0	1/1:0,13:13:23.87:224,24,0	0/0:6,0:3:3.61:0,4,45	0/0:3,1:3:2.80:0,3,13	1/1:1,0:1:3.01:33,3,0	1/1:7,21:28:27.85:279,28,0	1/1:2,1:2:5.38:50,5,0	1/1:1,13:14:17.97:206,18,0	1/1:0,16:16:26.83:244,27,0	./.	1/1:1,19:19:26.83:238,27,0	1/1:1,24:23:66.10:853,66,0	1/1:0,26:26:62.82:677,63,0	1/1:0,9:9:24.08:334,24,0
chr10	28983387	.	A	ATCT	7362.52	PASS	AC=46;AF=0.852;AN=54;BaseQRankSum=4.075;DP=394;FS=8.899;HRun=0;HaplotypeScore=210.8753;InbreedingCoeff=0.6975;MQ=43.51;MQ0=8;MQRankSum=-4.995;QD=20.39;ReadPosRankSum=-0.426;VQSLOD=3.3276;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:8:2.67:0,3,21	1/1:4,0:4:8.95:82,9,0	0/0:12,0:11:27.04:0,27,391	0/0:5,0:3:6.02:0,6,81	1/1:11,13:24:33.72:376,34,0	1/1:18,0:18:32.85:306,33,0	1/1:5,0:4:5.93:40,6,0	1/1:26,1:25:66.21:934,66,0	1/1:6,2:8:14.92:143,15,0	1/1:27,0:26:75.25:1068,75,0	1/1:20,0:20:21.68:173,22,0	1/1:10,0:10:17.86:157,18,0	1/1:21,0:19:26.85:247,27,0	1/1:12,0:12:11.95:119,12,0	1/1:17,0:17:32.81:326,33,0	1/1:14,0:14:26.88:266,27,0	0/0:6,0:3:5.95:0,6,48	1/1:3,0:3:2.94:18,3,0	1/1:0,1:1:3.01:70,3,0	1/1:23,5:28:38.70:399,39,0	1/1:2,0:1:3.01:42,3,0	1/1:15,0:15:17.97:199,18,0	1/1:17,0:17:26.83:236,27,0	./.	1/1:19,0:19:26.82:211,27,0	1/1:25,0:23:65.94:819,66,0	1/1:28,0:28:62.82:724,63,0	1/1:15,0:15:35.97:409,36,0
chr10	28983424	.	TATTA	T	488.97	PASS	AB=0.859;AC=14;AF=0.259;AN=54;BaseQRankSum=8.817;DP=395;FS=3.054;HRun=0;HaplotypeScore=236.4448;InbreedingCoeff=-0.2723;MQ=46.45;MQ0=3;MQRankSum=-4.739;QD=3.11;ReadPosRankSum=4.480;VQSLOD=2.2109;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:8,0:8:23.06:23,0,170	0/1:2,4:6:90.98:128,0,91	0/0:15,0:11:30.81:0,31,634	0/0:13,0:8:21.07:0,21,534	0/1:16,2:18:93.71:94,0,307	0/0:15,0:15:0.92:0,1,561	0/0:6,0:6:11.50:0,11,243	0/0:34,0:31:72.71:0,73,1289	0/1:6,1:7:15.61:16,0,342	0/0:25,0:25:24.44:0,24,1106	0/0:16,0:16:14.50:0,15,584	0/1:8,3:11:46.24:46,0,372	0/0:17,0:17:11.68:0,12,476	0/1:12,2:14:29.38:29,0,646	0/0:16,0:16:2.52:0,3,558	0/1:14,1:15:15.05:15,0,620	1/1:1,0:1:0.89:2,1,0	0/1:5,0:5:2.93:3,0,65	0/1:4,2:6:64.22:64,0,186	0/1:27,2:29:3.65:4,0,1077	0/0:1,0:1:3.01:0,3,60	0/0:16,0:15:31.05:0,31,582	0/0:15,1:16:4.56:0,5,549	./.	0/0:25,0:25:20.13:0,20,910	0/1:15,3:18:74.75:75,0,702	0/0:22,0:22:44.28:0,44,837	0/1:14,5:19:99:129,0,770
chr10	28983434	.	T	TC	3086.99	PASS	AB=0.764;AC=27;AF=0.482;AN=56;BaseQRankSum=1.900;DP=463;FS=6.258;HRun=0;HaplotypeScore=246.7454;InbreedingCoeff=-0.7089;MQ=44.54;MQ0=4;MQRankSum=-0.416;QD=7.15;ReadPosRankSum=5.017;VQSLOD=2.3009;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:5,12:17:35.81:214,0,36	0/1:3,5:8:23.79:204,0,24	0/0:15,0:11:32.14:0,32,421	0/0:13,0:6:15.05:0,15,200	0/1:9,10:19:77.87:152,0,78	0/1:12,6:18:99:113,0,117	0/1:5,0:5:29.03:29,0,109	0/1:33,2:30:59.96:60,0,909	0/1:6,1:7:20.96:21,0,100	0/1:23,4:27:99:189,0,712	0/1:13,1:14:69.70:70,0,118	0/1:8,6:14:73.72:148,0,74	0/1:11,9:20:80.83:127,0,81	0/1:13,3:16:49.76:50,0,149	0/1:11,7:18:76.73:119,0,77	0/1:12,4:16:31.55:32,0,209	1/1:0,4:4:6.02:96,6,0	0/1:4,4:8:33.19:51,0,33	0/1:8,4:11:99:155,0,172	0/1:25,12:37:80.40:80,0,177	0/0:1,2:3:2.96:0,3,20	0/1:11,6:16:99:111,0,127	0/1:14,8:22:99:111,0,131	1/1:1,2:3:3.01:48,3,0	0/1:17,12:29:99:325,0,162	0/1:12,10:22:99:404,0,397	0/1:17,6:23:99:115,0,307	0/1:14,7:21:99:217,0,397
chr10	28983440	.	AT	A	2218.89	PASS	AB=0.686;AC=15;AF=0.268;AN=56;BaseQRankSum=-2.271;DP=463;FS=10.562;HRun=1;HaplotypeScore=244.9289;InbreedingCoeff=-0.4029;MQ=43.56;MQ0=5;MQRankSum=-4.896;QD=8.34;ReadPosRankSum=1.939;VQSLOD=0.0319;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,2:20:21.06:0,21,309	0/1:7,1:8:17.75:18,0,254	0/0:14,0:9:27.06:0,27,365	0/0:15,0:8:15.05:0,15,229	0/1:13,7:20:6.21:6,0,197	0/1:7,9:16:29.90:30,0,129	0/1:5,3:8:68.67:69,0,122	0/1:12,18:25:99:629,0,146	0/0:1,5:6:3.01:0,3,45	0/1:12,14:26:99:491,0,415	0/1:2,12:14:32.91:33,0,84	0/0:7,6:13:12.04:0,12,181	0/1:14,8:22:14.73:15,0,261	0/0:5,11:16:9.03:0,9,122	0/0:8,10:18:9.02:0,9,109	0/1:5,10:15:32.79:33,0,81	0/0:5,0:5:9.01:0,9,116	0/1:7,1:8:32.82:33,0,99	0/1:8,5:12:99:138,0,225	0/0:17,19:36:27.08:0,27,389	0/0:3,0:3:2.98:0,3,25	0/0:9,10:18:15.04:0,15,214	0/1:11,12:23:26.86:27,0,167	0/0:6,0:6:6.02:0,6,94	0/0:13,13:26:27.06:0,27,356	0/1:10,9:19:99:320,0,408	0/1:8,15:23:99:157,0,171	0/1:7,14:21:99:373,0,218
chr10	28983474	.	CATAAACT	C	173.59	PASS	AB=0.904;AC=6;AF=0.107;AN=56;BaseQRankSum=4.814;DP=489;FS=15.980;HRun=0;HaplotypeScore=250.1258;InbreedingCoeff=-0.1303;MQ=59.69;MQ0=2;MQRankSum=-4.760;QD=1.46;ReadPosRankSum=-0.920;VQSLOD=0.7964;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,1:28:78.25:0,78,2170	0/0:11,0:11:33.11:0,33,1300	0/0:23,0:19:57.20:0,57,2256	0/0:16,0:12:36.12:0,36,1487	0/1:20,1:21:12.13:12,0,1609	0/0:14,0:14:36.12:0,36,1162	0/0:8,0:8:18.06:0,18,704	0/0:27,0:26:74.47:0,74,2931	0/0:12,0:12:36.12:0,36,1211	0/1:21,2:23:98.32:98,0,2542	0/0:8,1:9:24.08:0,24,916	0/0:17,0:17:48.16:0,48,1630	0/1:19,1:20:22.07:22,0,1550	0/1:12,0:12:9.84:10,0,1002	0/0:13,1:14:10.11:0,10,1135	0/0:14,0:14:41.73:0,42,1345	0/0:12,0:12:36.08:0,36,1168	0/0:7,0:7:18.06:0,18,680	0/0:17,0:16:45.07:0,45,1590	0/0:30,3:33:90.31:0,90,3246	0/0:9,0:9:21:0,21,689	0/0:16,1:16:14.02:0,14,1461	0/0:22,2:24:45.31:0,45,2039	0/0:15,0:15:42.03:0,42,1299	0/1:23,4:26:21:21,0,1825	0/0:26,0:26:78.27:0,78,3064	0/0:15,2:17:0.84:0,1,1502	0/1:8,6:16:99:131,0,895
chr10	28984352	.	G	GTCATTATC	59874.95	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-4.391;DP=679;FS=2.462;HRun=0;HaplotypeScore=166.4426;InbreedingCoeff=0.9365;MQ=84.13;MQ0=0;MQRankSum=-11.976;QD=97.68;ReadPosRankSum=4.647;VQSLOD=5.6833;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,22:35:84.28:2941,84,0	1/1:3,4:9:21.07:627,21,0	0/0:30,0:30:87.27:0,87,2172	0/0:36,0:36:77.19:0,77,1990	1/1:8,12:21:20.42:616,20,0	1/1:9,15:24:69.24:2671,69,0	1/1:12,11:28:66.23:2497,66,0	1/1:15,13:33:96.31:3623,96,0	1/1:7,20:28:81.28:3173,81,0	1/1:11,14:26:69.24:2733,69,0	1/1:0,18:21:57.19:2218,57,0	1/1:6,13:20:54.18:2248,54,0	1/1:9,21:35:84.29:3329,84,0	1/1:7,14:22:63.21:2284,63,0	1/1:13,34:48:99:5281,132,0	1/1:11,32:46:99:5290,129,0	1/1:4,12:19:36.12:1522,36,0	1/1:2,4:6:18.06:804,18,0	1/1:8,4:13:36.12:1194,36,0	1/1:7,17:31:72.24:2475,72,0	1/1:8,8:19:36.07:902,36,0	1/1:5,12:21:54.13:1722,54,0	1/1:1,6:9:17.79:729,18,0	1/1:5,10:16:42.14:1843,42,0	1/1:6,20:26:69.24:2662,69,0	1/1:11,15:27:75.26:3009,75,0	1/1:7,19:28:81.28:3355,81,0	1/1:2,0:2:6.02:125,6,0
chr10	28984615	.	T	TCGC	17505.09	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=7.792;DP=732;FS=0.672;HRun=0;HaplotypeScore=162.3455;InbreedingCoeff=0.8093;MQ=49.78;MQ0=9;MQRankSum=-4.102;QD=25.93;ReadPosRankSum=6.348;VQSLOD=4.8952;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,27:30:32.86:581,33,0	1/1:1,6:8:9.03:211,9,0	0/0:30,0:21:39.15:0,39,779	0/0:27,0:24:57.23:0,57,1102	1/1:3,17:19:8.98:171,9,0	1/1:3,14:18:15.04:319,15,0	1/1:5,35:42:36.83:781,37,0	1/1:2,31:35:99:1196,102,0	1/1:3,35:41:62.55:1277,63,0	1/1:3,18:21:42.56:666,43,0	1/1:3,7:10:9.03:210,9,0	1/1:5,34:40:60.19:1342,60,0	1/1:2,38:43:47.64:1114,48,0	1/1:3,22:28:21.05:436,21,0	1/1:0,36:37:51.18:1184,51,0	1/1:0,33:35:47.93:1123,48,0	1/1:3,16:20:28.08:562,28,0	1/1:4,14:19:18.05:425,18,0	1/1:7,17:21:50.71:841,51,0	1/1:3,18:21:42.12:786,42,0	1/1:5,23:29:2.85:71,3,0	1/1:0,16:17:24.02:524,24,0	1/1:0,19:19:11.83:242,12,0	1/1:2,42:46:35.46:840,35,0	1/1:3,13:15:15.05:279,15,0	1/1:1,19:22:57.18:1049,57,0	1/1:2,17:20:39.13:866,39,0	1/1:2,10:12:18.06:410,18,0
chr10	28985052	.	TTTCC	T	3955.09	PASS	AB=0.983;AC=34;AF=0.607;AN=56;BaseQRankSum=-3.308;DP=512;FS=11.871;HRun=0;HaplotypeScore=161.1841;InbreedingCoeff=-0.2746;MQ=58.28;MQ0=16;MQRankSum=-2.716;QD=9.26;ReadPosRankSum=-2.051;VQSLOD=1.7994;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:23:16.33:105,0,16	0/1:6,0:6:19.70:54,0,20	0/0:37,0:19:51.03:0,51,707	0/0:48,0:20:25.76:0,26,487	0/1:13,0:12:6.29:19,0,6	0/1:11,1:11:4.17:4,0,29	0/1:22,1:22:16.01:177,0,16	1/1:1,18:20:53.48:661,53,0	0/1:18,0:18:11.33:151,0,11	0/1:15,0:14:9.43:283,0,9	1/1:9,0:8:5.98:47,6,0	0/1:18,0:18:26.81:59,0,27	0/1:22,0:21:99:136,0,163	0/1:17,0:16:3.94:38,0,4	0/1:19,1:20:26.64:166,0,27	1/1:19,1:19:3.86:252,4,0	0/1:14,0:13:14.38:131,0,14	1/1:1,13:14:12.04:222,12,0	1/1:15,0:14:34.72:499,35,0	1/1:13,0:12:8.83:92,9,0	0/1:16,0:15:11.58:27,0,12	0/1:13,1:12:5.15:62,0,5	0/1:9,0:9:0.94:23,0,1	0/1:19,0:22:31.39:31,0,66	0/1:20,0:19:16.85:17,0,69	1/1:13,0:13:34.69:388,35,0	0/1:25,1:26:24.49:116,0,24	1/1:9,0:8:17.98:194,18,0
chr10	28985071	.	T	TTGTGTGTGTTTGTG	15943.86	PASS	AB=1.000;AC=53;AF=0.946;AN=56;BaseQRankSum=0.255;DP=657;FS=37.177;HRun=0;HaplotypeScore=280.6648;InbreedingCoeff=0.2575;MQ=55.80;MQ0=17;MQRankSum=-0.975;QD=25.67;ReadPosRankSum=-4.514;VQSLOD=2.5262;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:26:40.55:566,41,0	1/1:8,0:10:12.02:211,12,0	0/0:36,0:16:0.98:0,1,21	0/1:52,0:25:60.11:60,0,227	1/1:22,0:21:19.44:122,19,0	1/1:18,0:16:23.97:594,24,0	1/1:33,0:31:46.89:585,47,0	1/1:25,0:25:47.08:883,47,0	1/1:17,0:19:37.93:789,38,0	1/1:15,0:14:4.32:372,4,0	1/1:14,0:12:9.09:152,9,0	1/1:22,14:41:20.72:1111,21,0	1/1:27,0:29:45.60:528,46,0	1/1:12,8:22:23.41:1077,23,0	1/1:23,0:24:47.37:744,47,0	1/1:4,16:22:19.13:1337,19,0	1/1:15,0:14:10.75:116,11,0	1/1:16,0:16:18.31:193,18,0	1/1:11,12:25:61.17:1822,61,0	1/1:18,0:18:28.30:428,28,0	1/1:21,0:19:25.63:191,26,0	1/1:21,0:19:23.20:368,23,0	1/1:8,5:14:2.72:198,3,0	1/1:25,0:24:19.71:308,20,0	1/1:20,0:20:23.75:452,24,0	1/1:17,7:25:23.97:1447,24,0	1/1:8,15:27:15.68:476,16,0	1/1:6,1:9:9.47:814,9,0
chr10	28985075	.	G	GTGTGTT	8829.72	PASS	AB=1.000;AC=48;AF=0.857;AN=56;BaseQRankSum=5.736;DP=644;FS=17.445;HRun=0;HaplotypeScore=254.8967;InbreedingCoeff=-0.0691;MQ=54.83;MQ0=16;MQRankSum=-3.355;QD=14.31;ReadPosRankSum=0.913;VQSLOD=2.2982;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:27:34.98:393,35,0	1/1:8,1:9:11.18:193,11,0	0/0:27,0:10:1.10:0,1,22	0/1:43,0:23:56.36:56,0,247	0/1:22,0:21:8.19:61,0,8	1/1:18,0:16:23.97:337,24,0	1/1:33,0:31:43.05:420,43,0	1/1:24,0:23:10.85:552,11,0	1/1:20,0:19:37.93:439,38,0	1/1:15,0:14:2.29:186,2,0	0/1:14,0:12:8.96:92,0,9	0/1:42,0:42:10.66:569,0,11	1/1:31,0:29:45.64:377,46,0	1/1:22,0:21:3.48:454,3,0	1/1:24,0:24:46.92:622,47,0	1/1:24,0:24:19.12:576,19,0	1/1:7,8:19:19.43:396,19,0	1/1:13,1:14:3.50:172,4,0	1/1:22,0:22:27.95:741,28,0	1/1:19,0:18:25.75:286,26,0	1/1:22,0:20:6.21:145,6,0	1/1:20,0:18:3.35:222,3,0	1/1:17,0:15:3.95:45,4,0	1/1:27,0:25:6.65:185,7,0	1/1:24,0:22:0.10:278,0,0	0/1:25,0:24:7.58:529,0,8	0/1:26,0:26:8.10:179,0,8	1/1:11,0:9:9.50:323,10,0
chr10	28985774	.	A	AG	16024.03	PASS	AC=50;AF=0.926;AN=54;BaseQRankSum=10.011;DP=571;FS=3.599;HRun=2;HaplotypeScore=244.6830;InbreedingCoeff=0.9910;MQ=80.25;MQ0=0;MQRankSum=-11.207;QD=30.70;ReadPosRankSum=6.540;VQSLOD=3.8608;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:7,33:40:72.24:989,72,0	1/1:0,8:8:21.07:291,21,0	0/0:25,0:25:74.04:0,74,894	0/0:23,0:24:64.44:0,64,776	1/1:1,14:15:27.09:372,27,0	1/1:0,13:13:33.11:462,33,0	1/1:3,25:28:66.22:913,66,0	1/1:1,23:24:48.16:671,48,0	1/1:0,20:21:54.18:749,54,0	1/1:5,26:31:75.23:1028,75,0	1/1:1,8:10:20.69:237,21,0	1/1:2,26:28:65.81:902,66,0	1/1:1,24:25:60.16:816,60,0	1/1:0,19:19:51.13:693,51,0	1/1:4,25:29:66.22:926,66,0	1/1:1,37:38:99:1482,108,0	1/1:1,16:17:27.56:376,28,0	1/1:2,21:23:57.19:790,57,0	1/1:5,9:14:27.07:349,27,0	1/1:0,9:9:27.09:371,27,0	1/1:3,12:15:21.07:294,21,0	1/1:5,12:17:36.06:463,36,0	1/1:2,14:17:36.12:488,36,0	1/1:5,13:18:30.53:393,31,0	1/1:4,13:17:36.12:501,36,0	1/1:5,17:23:51.17:711,51,0	1/1:1,22:23:57.10:757,57,0	./.
chr10	28986131	.	CGTTTCA	C	30123.35	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-0.112;DP=680;FS=19.484;HRun=0;HaplotypeScore=172.6017;InbreedingCoeff=0.9142;MQ=72.41;MQ0=0;MQRankSum=-10.417;QD=47.36;ReadPosRankSum=6.006;VQSLOD=3.1415;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,39:43:89.58:1704,90,0	1/1:0,12:12:30.06:647,30,0	0/0:23,0:23:63.19:0,63,1743	0/0:21,0:21:50.32:0,50,1530	1/1:1,16:17:32.58:601,33,0	1/1:2,22:24:57.09:1223,57,0	1/1:5,29:34:77.83:1648,78,0	1/1:2,27:29:75.04:1659,75,0	1/1:4,34:38:96.33:2230,96,0	1/1:5,23:28:65.89:1469,66,0	1/1:1,5:6:11.88:127,12,0	1/1:1,38:39:99:2297,99,0	1/1:2,26:28:77.92:1811,78,0	1/1:4,28:32:69.22:1602,69,0	1/1:2,42:44:93.19:2161,93,0	1/1:4,31:35:78.27:1813,78,0	1/1:5,20:25:44.35:972,44,0	1/1:0,9:9:12.04:279,12,0	1/1:7,21:28:59.78:1005,60,0	1/1:1,15:16:35.32:564,35,0	1/1:5,25:30:44.73:852,45,0	1/1:0,11:11:32.79:608,33,0	1/1:2,10:12:23.72:399,24,0	1/1:2,19:21:28.96:527,29,0	1/1:3,8:11:17.89:363,18,0	1/1:2,26:28:80.90:1683,81,0	1/1:2,32:34:78:1740,78,0	1/1:0,2:2:6.02:140,6,0
chr10	28986818	.	T	TGCCATGAACACACAC	14503.86	PASS	AB=0.750;AC=53;AF=0.981;AN=54;BaseQRankSum=-1.859;DP=173;FS=26.050;HRun=0;HaplotypeScore=103.1253;InbreedingCoeff=-0.0635;MQ=71.89;MQ0=0;MQRankSum=-2.725;QD=84.32;ReadPosRankSum=1.825;VQSLOD=2.8319;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,0:7:9.48:198,9,0	1/1:3,0:3:6.02:196,6,0	1/1:2,0:5:10.59:355,11,0	0/1:4,1:6:59.51:286,0,60	1/1:9,0:9:15.05:585,15,0	1/1:6,0:6:12.04:452,12,0	1/1:8,0:8:15.52:678,16,0	1/1:10,0:10:27.09:1565,27,0	1/1:10,0:10:21.07:918,21,0	1/1:9,0:9:21.06:1037,21,0	1/1:3,0:3:9.02:259,9,0	1/1:5,0:5:9.03:507,9,0	1/1:7,0:7:9.03:325,9,0	1/1:4,0:4:12.04:433,12,0	1/1:6,0:6:15.05:473,15,0	1/1:7,0:7:15.05:575,15,0	1/1:3,0:3:9.03:450,9,0	1/1:6,0:6:12.04:591,12,0	1/1:3,0:3:3.01:84,3,0	1/1:6,0:6:12.04:451,12,0	1/1:9,0:9:21.06:727,21,0	1/1:7,0:7:15.52:542,16,0	1/1:3,0:3:6.02:233,6,0	1/1:6,0:6:6.02:155,6,0	1/1:5,0:5:6.02:238,6,0	1/1:14,0:14:33.11:1634,33,0	1/1:5,0:5:12.02:556,12,0	./.
chr10	28987536	.	A	AGAG	36273.86	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-7.420;DP=686;FS=9.208;HRun=0;HaplotypeScore=100.4095;InbreedingCoeff=0.9721;MQ=83.39;MQ0=0;MQRankSum=-11.364;QD=56.94;ReadPosRankSum=7.503;VQSLOD=6.3146;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,45:51:99:2449,105,0	1/1:2,5:8:12.04:284,12,0	0/0:28,0:28:81.22:0,81,1332	0/0:21,0:21:60.09:0,60,903	1/1:3,22:25:69.24:1613,69,0	1/1:4,13:19:33.11:780,33,0	1/1:4,20:25:60.21:1382,60,0	1/1:10,22:33:90.30:2037,90,0	1/1:0,16:17:39.07:868,39,0	1/1:3,21:25:75.26:1712,75,0	1/1:3,21:24:51.18:1206,51,0	1/1:1,23:24:54.19:1275,54,0	1/1:0,21:24:63.22:1484,63,0	1/1:1,30:32:78.20:1768,78,0	1/1:3,25:28:72.19:1643,72,0	1/1:1,28:30:78.27:1843,78,0	1/1:3,32:35:90.31:2127,90,0	1/1:3,15:18:48.16:1135,48,0	1/1:8,9:19:48.16:1033,48,0	1/1:0,23:23:60.16:1335,60,0	1/1:2,39:44:96.33:2264,96,0	1/1:3,12:16:33.11:779,33,0	1/1:0,12:12:33.11:775,33,0	1/1:1,30:32:84.29:1985,84,0	1/1:0,10:10:18.06:425,18,0	1/1:4,28:32:96.33:2210,96,0	1/1:0,24:25:66.17:1507,66,0	1/1:0,5:6:15.05:355,15,0
chr10	28990496	.	GTATTATTAT	G	8004.21	PASS	AB=1.000;AC=47;AF=0.940;AN=50;BaseQRankSum=-1.666;DP=260;FS=0.000;HRun=0;HaplotypeScore=77.8727;InbreedingCoeff=0.1973;MQ=71.24;MQ0=0;MQRankSum=-2.285;QD=32.28;ReadPosRankSum=1.816;VQSLOD=3.9020;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,6:11:5.51:250,6,0	1/1:2,2:4:6.02:171,6,0	0/0:7,0:6:6.02:0,6,123	0/1:8,0:7:19.04:19,0,64	1/1:7,0:7:3.01:72,3,0	1/1:4,11:15:21.07:597,21,0	1/1:1,3:4:3.01:85,3,0	1/1:10,16:26:48.16:1244,48,0	1/1:4,4:8:12.04:341,12,0	1/1:8,5:13:15.05:426,15,0	1/1:3,4:7:12.04:341,12,0	./.	1/1:3,9:12:15.05:426,15,0	1/1:5,6:11:9.03:256,9,0	1/1:3,3:6:6.02:161,6,0	1/1:4,6:10:12.04:341,12,0	1/1:3,8:11:15.05:414,15,0	1/1:3,9:12:12.04:341,12,0	1/1:7,8:15:24.07:527,24,0	1/1:8,7:15:14.91:292,15,0	./.	1/1:2,2:4:3.01:85,3,0	1/1:6,3:9:3.01:85,3,0	./.	1/1:5,7:12:15.05:426,15,0	1/1:3,8:11:24.08:592,24,0	1/1:5,7:12:15.05:426,15,0	1/1:1,4:5:3.01:85,3,0
chr10	28991760	.	A	ATT	22070.07	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-7.572;DP=622;FS=0.000;HRun=7;HaplotypeScore=75.3184;InbreedingCoeff=0.8875;MQ=80.54;MQ0=0;MQRankSum=-8.856;QD=37.79;ReadPosRankSum=4.759;VQSLOD=4.5075;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,30:30:87.30:1428,87,0	1/1:1,13:14:32.94:542,33,0	0/0:22,0:22:2.61:0,3,441	0/0:16,0:16:31.61:0,32,430	1/1:7,22:29:66.14:1022,66,0	1/1:3,21:24:63.22:1034,63,0	1/1:2,24:26:60.20:985,60,0	1/1:6,29:35:87.30:1419,87,0	1/1:1,12:14:33.11:542,33,0	1/1:0,20:21:63.19:985,63,0	1/1:0,16:17:48.16:767,48,0	1/1:2,18:20:51.17:837,51,0	1/1:2,17:19:48.16:788,48,0	1/1:1,20:21:54.18:867,54,0	1/1:2,25:27:69.24:1132,69,0	1/1:2,22:25:66.23:1083,66,0	1/1:5,0:33:62.48:221,62,0	1/1:0,0:22:52.81:191,53,0	1/1:5,16:22:51.05:798,51,0	1/1:3,25:29:78.23:1219,78,0	1/1:5,24:31:68.57:1055,69,0	1/1:2,18:20:54.18:886,54,0	1/1:3,14:17:42.14:670,42,0	1/1:0,16:16:42.14:689,42,0	1/1:1,13:15:35.61:550,36,0	1/1:0,22:23:66.20:1057,66,0	1/1:3,23:26:66.20:1056,66,0	1/1:3,5:8:15.05:246,15,0
chr10	28994937	.	A	AT	22251.98	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-3.280;DP=692;FS=2.195;HRun=5;HaplotypeScore=90.0392;InbreedingCoeff=0.9976;MQ=86.87;MQ0=0;MQRankSum=-10.070;QD=34.50;ReadPosRankSum=5.477;VQSLOD=4.4499;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,34:36:81.22:1046,81,0	1/1:1,10:11:30.10:394,30,0	0/0:23,0:23:56.94:0,57,571	0/0:24,0:24:51.05:0,51,511	1/1:0,25:25:63.20:829,63,0	1/1:0,18:18:51.17:671,51,0	1/1:2,31:33:90.29:1184,90,0	1/1:8,32:40:93.28:1194,93,0	1/1:2,24:26:66.21:868,66,0	1/1:5,25:30:78.18:988,78,0	1/1:0,9:9:24.07:302,24,0	1/1:2,26:28:75.24:987,75,0	1/1:0,28:28:78.25:1026,78,0	1/1:2,32:34:93.30:1223,93,0	1/1:3,29:32:81.26:1066,81,0	1/1:2,26:28:75.24:987,75,0	1/1:1,35:36:99:1342,102,0	1/1:1,21:22:63.20:829,63,0	1/1:2,13:15:39.11:486,39,0	1/1:1,14:15:42.10:534,42,0	1/1:1,24:25:75.24:987,75,0	1/1:1,19:20:54.18:710,54,0	1/1:2,21:23:63.20:828,63,0	1/1:0,31:31:81.26:1066,81,0	1/1:0,23:23:69.22:907,69,0	1/1:7,25:33:75.22:970,75,0	1/1:1,15:16:39.13:513,39,0	1/1:0,8:8:24.08:316,24,0
chr10	28997512	.	TTGTGTGTGTG	T	3553.40	PASS	AB=0.878;AC=28;AF=0.519;AN=54;BaseQRankSum=4.068;DP=690;FS=48.944;HRun=0;HaplotypeScore=190.7444;InbreedingCoeff=-0.3267;MQ=65.33;MQ0=19;MQRankSum=-1.545;QD=6.78;ReadPosRankSum=-1.052;VQSLOD=0.8093;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:32,0:31:14.92:98,0,15	1/1:2,1:5:3.01:70,3,0	0/0:28,0:22:0:0,0,0	./.	0/1:16,2:16:9.77:30,0,10	0/1:16,13:28:40.20:308,0,40	0/1:18,0:15:74.94:75,0,86	0/1:29,0:28:7.66:8,0,61	1/1:7,9:17:15.04:353,15,0	0/1:23,4:26:98.08:134,0,98	1/1:7,0:7:3.01:65,3,0	0/1:42,0:42:96.30:99,0,96	0/1:19,6:25:56.60:245,0,57	0/1:16,5:21:99:124,0,124	1/1:16,10:27:17.17:398,17,0	0/1:25,4:31:99:738,0,107	0/0:30,0:30:30.05:0,30,841	0/0:35,0:34:47.93:0,48,1126	0/0:23,0:22:3.58:0,4,10	0/1:11,0:11:6.97:48,0,7	0/1:55,0:52:99:265,0,147	1/1:16,11:27:4.88:38,5,0	0/0:11,3:14:0:0,0,0	0/1:27,12:39:74.01:74,0,136	0/1:6,7:13:15.03:82,0,15	0/1:25,0:24:49.31:199,0,49	0/1:14,8:22:58.12:78,0,58	1/1:3,0:1:2.99:23,3,0
chr10	29000505	.	T	TAA	1472.50	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-9.212;DP=689;FS=3.187;HRun=8;HaplotypeScore=79.3093;InbreedingCoeff=0.9997;MQ=72.47;MQ0=0;MQRankSum=-3.091;QD=37.76;ReadPosRankSum=2.242;VQSLOD=3.6964;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:72.18:0,72,803	0/0:14,0:14:42.10:0,42,459	0/0:19,0:19:36.02:0,36,367	0/0:19,0:19:48.56:0,49,462	0/0:43,0:43:99:0,114,1269	0/0:25,0:25:66.16:0,66,735	0/0:19,0:19:48.08:0,48,522	0/0:40,0:40:99:0,99,1097	0/0:28,0:28:78.20:0,78,868	0/0:21,0:21:51.12:0,51,564	0/0:30,0:30:81.12:0,81,869	0/0:23,0:23:51.11:0,51,559	0/0:27,0:27:72.16:0,72,784	0/0:17,0:17:42.11:0,42,468	0/0:23,0:23:66.13:0,66,716	0/0:33,0:33:90.22:0,90,995	1/1:2,24:26:66.23:1048,66,0	1/1:0,12:13:36.12:546,36,0	0/0:29,0:29:72.13:0,72,791	0/0:30,0:30:81.18:0,81,884	0/0:19,0:19:48.12:0,48,535	0/0:21,0:21:57.15:0,57,635	0/0:28,0:28:81.22:0,81,902	0/0:17,0:17:45.10:0,45,491	0/0:23,0:23:66.17:0,66,727	0/0:30,0:30:81.18:0,81,894	0/0:33,0:33:81.12:0,81,867	0/0:12,0:12:36.07:0,36,389
chr10	29002491	.	A	AT	713.82	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=-6.810;DP=627;FS=3.527;HRun=10;HaplotypeScore=59.6230;InbreedingCoeff=0.7973;MQ=78.53;MQ0=0;MQRankSum=-0.803;QD=15.52;ReadPosRankSum=0.970;VQSLOD=4.0197;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:31:79.88:0,80,642	0/0:17,0:17:38.92:0,39,320	0/0:20,0:20:20.86:0,21,163	0/1:13,0:12:9.31:9,0,83	0/0:25,0:25:71.92:0,72,591	0/0:17,0:18:46.98:0,47,375	0/0:16,0:16:29.21:0,29,245	0/0:29,0:29:68.87:0,69,562	0/0:22,0:22:65.92:0,66,542	0/0:28,0:28:74.91:0,75,616	0/0:28,0:28:59.90:0,60,493	0/0:13,0:13:35.96:0,36,296	0/0:20,0:20:56.91:0,57,465	0/0:22,0:22:59.90:0,60,490	0/0:33,0:33:83.86:0,84,686	0/0:17,0:17:44.94:0,45,370	1/1:3,13:16:39.10:416,39,0	1/1:3,14:17:39.10:416,39,0	0/0:15,0:15:31.27:0,31,250	0/0:34,1:35:62.92:0,63,710	0/0:13,0:13:38.96:0,39,320	0/0:31,0:31:86.89:0,87,714	0/0:24,1:25:27.90:0,28,430	0/0:17,0:17:47.94:0,48,394	0/0:29,0:30:73.90:0,74,591	0/0:25,0:25:56.90:0,57,467	0/0:35,0:35:95.84:0,96,785	0/0:16,0:16:44.95:0,45,369
chr10	29003016	.	GA	G	1584.28	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=4.798;DP=631;FS=2.812;HRun=1;HaplotypeScore=70.6441;InbreedingCoeff=0.9955;MQ=80.96;MQ0=0;MQRankSum=-1.395;QD=34.44;ReadPosRankSum=2.474;VQSLOD=3.7245;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,105,1470	0/0:13,0:13:39.10:0,39,526	0/0:19,0:19:50.76:0,51,635	0/0:30,0:29:53.20:0,53,701	0/0:24,0:24:66.08:0,66,844	0/0:17,0:17:51.11:0,51,668	0/0:25,0:25:72.18:0,72,953	0/0:31,0:31:90.26:0,90,1203	0/0:16,0:16:47.37:0,47,663	0/0:28,0:28:75.17:0,75,965	0/0:10,0:10:30.08:0,30,412	0/0:22,0:22:63.19:0,63,878	0/0:25,0:25:72.21:0,72,1023	0/0:19,0:19:56.52:0,57,738	0/0:39,0:39:99:0,107,1557	0/0:21,0:21:63.21:0,63,920	1/1:0,33:33:84.28:1163,84,0	1/1:0,13:13:39.13:543,39,0	0/0:13,0:13:39.10:0,39,500	0/0:18,0:18:54.14:0,54,720	0/0:40,0:40:99:0,120,1661	0/0:16,0:16:48.12:0,48,641	0/0:21,0:21:63.02:0,63,855	0/0:28,0:28:84.21:0,84,1132	0/0:24,0:24:72.18:0,72,948	0/0:21,0:21:52.01:0,52,661	0/0:24,0:24:72.23:0,72,1016	0/0:6,0:6:18.06:0,18,262
chr10	29004911	.	AGT	A	274.84	PASS	AB=0.981;AC=16;AF=0.296;AN=54;BaseQRankSum=-4.645;DP=658;FS=31.237;HRun=0;HaplotypeScore=134.9735;InbreedingCoeff=-0.2056;MQ=67.26;MQ0=15;MQRankSum=0.374;QD=0.73;ReadPosRankSum=4.665;VQSLOD=0.9949;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:10.55:0,11,49	0/1:9,1:10:4.55:5,0,19	./.	0/0:37,0:23:0:0,0,0	0/1:21,1:21:25.26:25,0,28	0/0:21,0:21:8.03:0,8,45	0/1:39,0:39:3.09:3,0,173	1/1:28,0:26:10.24:64,10,0	0/1:19,0:19:4.60:5,0,60	0/0:20,0:18:22:0,22,203	0/0:15,0:15:6:0,6,52	0/1:22,0:22:59.12:97,0,59	0/0:15,0:16:8.71:0,9,75	0/0:25,0:25:13.72:0,14,143	0/1:14,0:14:36.84:37,0,46	0/1:18,1:19:21.50:21,0,35	0/1:33,1:34:26.68:27,0,115	0/1:38,2:39:45.43:60,0,45	0/1:18,0:18:15.81:27,0,16	0/0:22,0:22:7.26:0,7,63	0/1:43,0:40:3.30:3,0,51	0/0:10,0:10:6.47:0,6,41	0/1:25,0:25:2.12:2,0,21	0/1:25,0:25:0.38:0,0,85	0/0:24,0:24:23.51:0,24,217	0/0:12,0:12:3.11:0,3,17	0/1:20,0:20:15.66:38,0,16	0/0:9,0:9:6.12:0,6,43
chr10	29004953	.	T	TGC	5665.98	PASS	AB=0.841;AC=46;AF=0.821;AN=56;BaseQRankSum=-5.225;DP=512;FS=5.163;HRun=0;HaplotypeScore=93.4119;InbreedingCoeff=0.0638;MQ=60.44;MQ0=11;MQRankSum=3.012;QD=11.49;ReadPosRankSum=3.289;VQSLOD=3.9657;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,25:31:3.81:148,4,0	1/1:6,1:7:13.97:122,14,0	0/0:8,0:2:3.01:0,3,36	0/0:11,0:6:3.01:0,3,32	0/1:15,1:15:4.07:55,0,4	1/1:2,17:19:0.23:145,0,0	0/1:10,30:40:30.92:191,0,31	1/1:18,0:17:24.63:183,25,0	1/1:15,0:15:19.14:232,19,0	1/1:20,0:19:5.41:186,5,0	1/1:13,0:13:10.04:56,10,0	1/1:18,4:22:23.08:367,23,0	0/1:7,9:16:11.65:132,0,12	0/1:15,2:17:19.60:128,0,20	1/1:9,3:12:13.40:209,13,0	1/1:13,2:15:13.87:359,14,0	1/1:20,5:24:16.56:416,17,0	1/1:18,5:22:30.73:429,31,0	1/1:5,12:17:23.84:211,24,0	1/1:7,1:8:14.32:120,14,0	1/1:25,7:31:14.31:506,14,0	1/1:12,3:15:14.08:206,14,0	1/1:12,3:15:31.04:257,31,0	1/1:5,26:32:3.52:389,4,0	0/1:22,0:22:62.62:145,0,63	1/1:1,13:15:39.19:326,39,0	1/1:14,0:13:1.38:31,1,0	0/1:13,0:13:5.70:117,0,6
chr10	29004955	.	T	TGCGC	8257.17	PASS	AB=1.000;AC=51;AF=0.911;AN=56;BaseQRankSum=-5.523;DP=528;FS=26.657;HRun=0;HaplotypeScore=112.9076;InbreedingCoeff=0.4173;MQ=61.34;MQ0=11;MQRankSum=1.150;QD=16.25;ReadPosRankSum=2.399;VQSLOD=2.5823;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:32,0:31:10.75:128,11,0	1/1:8,0:8:15.78:203,16,0	0/0:8,0:2:3.01:0,3,56	0/0:12,0:7:8.84:0,9,85	1/1:5,13:17:1.30:59,1,0	1/1:19,0:19:6.07:124,6,0	1/1:40,0:40:6.65:197,7,0	1/1:19,0:18:22.28:296,22,0	1/1:15,0:15:28.66:366,29,0	1/1:18,0:17:44.93:547,45,0	1/1:1,0:16:6.02:129,6,0	1/1:23,0:23:35.93:439,36,0	1/1:18,0:18:6.47:152,6,0	1/1:17,0:17:10.32:231,10,0	1/1:12,0:12:20.07:254,20,0	1/1:15,0:15:20.72:390,21,0	1/1:27,0:26:39.24:519,39,0	1/1:24,0:23:44.64:555,45,0	1/1:17,0:17:40.71:379,41,0	1/1:7,2:9:15.05:296,15,0	1/1:33,0:32:9.98:631,10,0	1/1:15,0:15:27:373,27,0	1/1:14,0:14:31.91:341,32,0	1/1:32,0:32:22.08:352,22,0	1/1:16,4:22:38.93:584,39,0	1/1:15,0:15:42.02:524,42,0	1/1:3,0:14:2.73:21,3,0	0/1:15,0:15:19.53:166,0,20
chr10	29005665	.	G	GATCCATCC	15768.33	PASS	AB=0.692;AC=51;AF=0.981;AN=52;DP=702;FS=0.000;HRun=0;HaplotypeScore=143.4777;InbreedingCoeff=0.2528;MQ=60.92;MQ0=14;QD=25.31;VQSLOD=4.3186;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:19,10:36:12.04:390,12,0	1/1:4,7:13:15.05:595,15,0	./.	./.	1/1:19,9:30:11.67:267,12,0	1/1:10,9:22:12.04:464,12,0	1/1:24,0:24:29.97:464,30,0	1/1:43,0:43:18:228,18,0	1/1:10,7:22:15.05:610,15,0	1/1:10,7:21:27.09:737,27,0	1/1:10,12:25:21.06:791,21,0	1/1:8,10:19:12.04:487,12,0	1/1:10,10:23:24.08:950,24,0	1/1:14,7:23:21.03:737,21,0	1/1:16,11:34:24.08:937,24,0	1/1:8,10:23:21.07:819,21,0	1/1:7,5:13:6.49:245,6,0	1/1:11,0:11:9.01:103,9,0	1/1:24,0:24:30.03:694,30,0	1/1:16,14:35:39:1182,39,0	1/1:17,3:25:3.01:121,3,0	1/1:10,13:29:30.10:1161,30,0	1/1:13,13:29:18.06:683,18,0	0/1:10,3:18:0:0,0,0	1/1:8,10:20:27.09:1072,27,0	1/1:12,10:25:30.01:931,30,0	1/1:11,11:28:24.08:977,24,0	1/1:6,2:8:3.01:122,3,0
chr10	29008159	.	C	CA	26275.17	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-9.465;DP=736;FS=2.555;HRun=1;HaplotypeScore=61.8371;InbreedingCoeff=0.9984;MQ=90.25;MQ0=0;MQRankSum=-11.606;QD=38.58;ReadPosRankSum=6.703;VQSLOD=4.8172;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,44:47:99:1708,114,0	1/1:0,9:9:24.08:360,24,0	0/0:30,0:30:78.11:0,78,969	0/0:25,0:25:61.08:0,61,795	1/1:2,28:30:84.20:1208,84,0	1/1:2,32:34:84.28:1253,84,0	1/1:0,36:36:96.33:1438,96,0	1/1:1,24:25:72.21:1020,72,0	1/1:1,34:35:90.30:1348,90,0	1/1:3,29:32:78.21:1119,78,0	1/1:2,23:25:60.20:898,60,0	1/1:1,21:22:63.21:943,63,0	1/1:2,16:18:39.13:570,39,0	1/1:2,21:23:54.18:809,54,0	1/1:0,17:17:42.14:629,42,0	1/1:1,21:22:57.19:854,57,0	1/1:3,46:49:99:1887,126,0	1/1:0,19:19:51.17:764,51,0	1/1:1,18:19:54.15:768,54,0	1/1:0,17:17:48.12:688,48,0	1/1:0,52:52:99:2112,141,0	1/1:1,20:21:48.16:719,48,0	1/1:2,18:20:48.16:719,48,0	1/1:2,21:23:63.21:944,63,0	1/1:0,19:19:54.18:809,54,0	1/1:2,24:26:75.23:1095,75,0	1/1:1,31:32:81.27:1212,81,0	1/1:0,9:9:27.09:404,27,0
chr10	29009982	.	AG	A	18419.92	PASS	AB=0.710;AC=54;AF=0.964;AN=56;BaseQRankSum=-4.807;DP=597;FS=1.096;HRun=3;HaplotypeScore=63.2336;InbreedingCoeff=-0.0458;MQ=79.87;MQ0=0;MQRankSum=-4.959;QD=30.85;ReadPosRankSum=4.245;VQSLOD=4.6488;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,34:37:99:1225,99,0	1/1:0,10:10:30.07:355,30,0	0/1:7,11:18:94.76:338,0,95	0/1:15,5:20:99:112,0,145	1/1:4,9:13:30.56:370,31,0	1/1:1,17:18:48.15:595,48,0	1/1:1,19:20:54.17:669,54,0	1/1:4,31:35:84.21:1009,84,0	1/1:2,23:25:60.19:739,60,0	1/1:2,14:16:42.12:511,42,0	1/1:1,10:11:3.13:239,3,0	1/1:1,27:28:69.22:855,69,0	1/1:3,31:34:87.27:1078,87,0	1/1:5,21:26:72.22:886,72,0	1/1:1,21:22:63.20:780,63,0	1/1:3,31:34:87.27:1076,87,0	1/1:1,26:27:75.24:930,75,0	1/1:0,19:19:57.18:706,57,0	1/1:3,22:25:69.03:817,69,0	1/1:4,11:15:39.12:480,39,0	1/1:6,31:37:84.21:1023,84,0	1/1:0,9:9:21.07:260,21,0	1/1:1,8:9:24.08:297,24,0	1/1:0,22:22:63.20:781,63,0	1/1:0,14:14:36.11:446,36,0	1/1:1,22:23:66.18:802,66,0	1/1:1,26:27:75.09:929,75,0	1/1:0,3:3:9.03:112,9,0
chr10	29009985	.	GT	G	6431.07	PASS	AB=0.935;AC=54;AF=0.964;AN=56;BaseQRankSum=2.364;DP=584;FS=5.379;HRun=1;HaplotypeScore=103.8614;InbreedingCoeff=-0.0048;MQ=81.99;MQ0=0;MQRankSum=-4.935;QD=11.01;ReadPosRankSum=8.363;VQSLOD=2.6605;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:35,1:36:93.16:505,93,0	1/1:10,0:10:25.02:136,25,0	0/1:19,0:19:47.62:48,0,222	0/1:17,3:20:13.09:13,0,268	1/1:9,2:11:31.81:216,32,0	1/1:17,0:17:44.83:222,45,0	1/1:21,0:21:6.98:182,7,0	1/1:32,0:32:42.64:254,43,0	1/1:26,1:27:13.69:271,14,0	1/1:14,0:14:34.71:166,35,0	1/1:11,0:11:19.58:94,20,0	1/1:27,0:27:64.83:341,65,0	1/1:33,0:33:37.63:335,38,0	1/1:22,3:25:46.06:384,46,0	1/1:21,1:22:58.63:303,59,0	1/1:32,1:33:58.58:375,59,0	1/1:27,0:27:50.66:304,51,0	1/1:20,0:20:33.91:228,34,0	1/1:24,0:24:23.26:186,23,0	1/1:11,3:14:23.63:241,24,0	1/1:34,1:35:62.18:355,62,0	1/1:9,0:9:19.73:98,20,0	1/1:8,0:8:22.64:119,23,0	1/1:23,0:23:37.50:251,37,0	1/1:14,0:14:33.90:170,34,0	1/1:22,0:22:53.54:239,54,0	1/1:27,0:26:70.25:356,70,0	1/1:3,0:3:8.29:38,8,0
chr10	29021514	.	C	CTTTTTTTTTAT	11130.08	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=1.373;DP=268;FS=11.707;HRun=0;HaplotypeScore=60.2837;InbreedingCoeff=0.6261;MQ=57.85;MQ0=1;MQRankSum=-2.991;QD=55.10;ReadPosRankSum=-2.997;VQSLOD=2.7329;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,0:17:6.02:204,6,0	1/1:0,1:7:12:340,12,0	0/0:4,0:1:3.01:0,3,66	0/0:6,0:2:6.02:0,6,96	1/1:0,0:12:30.10:683,30,0	1/1:3,8:13:15.05:725,15,0	1/1:0,5:5:3.01:160,3,0	1/1:37,0:37:99:2265,99,0	0/0:7,0:7:21.04:0,21,440	1/1:7,0:7:21.06:645,21,0	1/1:5,0:5:15.05:380,15,0	1/1:0,3:5:2.71:172,3,0	1/1:0,10:14:9.03:507,9,0	1/1:3,0:3:6.02:195,6,0	1/1:1,0:4:3.01:172,3,0	1/1:1,3:5:3.01:172,3,0	0/0:26,0:26:35.28:0,35,1984	0/0:23,0:23:22.98:0,23,1527	1/1:2,6:11:30.09:659,30,0	1/1:0,3:5:12.04:413,12,0	1/1:1,0:1:3.01:66,3,0	1/1:0,7:8:24.04:525,24,0	1/1:2,0:2:6.01:93,6,0	1/1:1,0:1:3.01:58,3,0	1/1:0,7:9:9.03:505,9,0	1/1:1,7:10:24.07:812,24,0	1/1:10,0:11:33.03:686,33,0	1/1:0,6:10:12.04:691,12,0
chr10	29021516	.	TA	T	2086.39	PASS	AB=0.827;AC=21;AF=0.375;AN=56;BaseQRankSum=3.656;DP=245;FS=27.412;HRun=1;HaplotypeScore=46.1920;InbreedingCoeff=0.2079;MQ=56.42;MQ0=1;MQRankSum=4.152;QD=16.83;ReadPosRankSum=-3.051;VQSLOD=1.6366;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:16:2.38:24,2,0	0/0:5,0:5:0.78:0,1,14	0/0:4,0:1:3.01:0,3,45	0/0:8,0:2:6.02:0,6,85	1/1:11,0:11:14.91:241,15,0	0/1:10,1:11:4.34:4,0,71	0/0:5,0:5:2.22:0,2,7	0/1:9,27:36:99:888,0,157	0/0:7,0:7:21.04:0,21,277	0/1:3,4:7:99:121,0,99	1/1:1,4:5:12.04:156,12,0	0/0:3,0:3:2.68:0,3,11	0/0:13,0:13:10.22:0,10,50	0/1:2,0:2:21.66:22,0,41	0/0:4,0:4:5.61:0,6,45	0/0:2,0:2:2.68:0,3,11	0/0:26,0:26:78.25:0,78,1160	0/0:24,0:24:66.41:0,66,953	1/1:5,1:6:7.17:184,7,0	0/1:4,0:4:12.30:30,0,12	1/1:0,1:1:3.01:39,3,0	1/1:5,0:5:4.27:149,4,0	0/1:1,1:2:32.89:33,0,41	0/0:1,0:1:0.47:0,0,1	0/0:9,0:9:7.58:0,8,28	0/1:7,0:7:61.41:69,0,61	1/1:5,6:11:12.46:291,12,0	0/0:10,0:10:10.63:0,11,42
chr10	29022516	.	C	CCCAG	33381.32	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-12.934;DP=694;FS=23.891;HRun=0;HaplotypeScore=97.4468;InbreedingCoeff=0.9995;MQ=89.36;MQ0=4;MQRankSum=-9.765;QD=60.47;ReadPosRankSum=3.716;VQSLOD=4.0133;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,39:43:90.27:2325,90,0	1/1:1,10:11:30.06:650,30,0	0/0:30,0:30:78.27:0,78,1428	0/0:28,0:28:72.08:0,72,1168	1/1:3,30:33:84.29:2197,84,0	1/1:2,15:18:42.11:1046,42,0	1/1:4,17:21:42.14:1119,42,0	1/1:9,24:34:87.27:2073,87,0	0/0:22,0:22:66.19:0,66,1133	1/1:2,19:22:54.18:1382,54,0	1/1:1,13:14:33.11:879,33,0	1/1:0,19:19:48.16:1279,48,0	1/1:0,29:29:72.25:1906,72,0	1/1:1,19:19:42.14:1118,42,0	1/1:2,22:24:63.22:1679,63,0	1/1:5,31:37:93.28:2387,93,0	0/0:36,0:36:93.29:0,93,1651	0/0:26,0:26:69.24:0,69,1287	1/1:6,23:29:78.26:1883,78,0	1/1:3,17:22:60.20:1456,60,0	1/1:2,25:28:51.13:1275,51,0	1/1:1,15:16:42.14:1091,42,0	1/1:2,11:14:33:859,33,0	1/1:3,26:30:63.22:1679,63,0	1/1:3,14:17:39.13:1038,39,0	1/1:2,25:28:75.21:1747,75,0	1/1:3,26:28:60.21:1597,60,0	1/1:2,10:12:27.09:719,27,0
chr10	29023106	.	C	CA	14468.73	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-9.804;DP=646;FS=8.702;HRun=9;HaplotypeScore=62.5616;InbreedingCoeff=0.9747;MQ=69.93;MQ0=0;MQRankSum=-1.179;QD=25.93;ReadPosRankSum=1.365;VQSLOD=5.3862;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,26:32:77.71:806,78,0	1/1:1,12:13:33.05:352,33,0	0/0:17,0:17:31.38:0,31,249	0/0:9,0:9:9.30:0,9,136	1/1:3,23:27:69.34:689,69,0	1/1:2,14:16:10.04:339,10,0	1/1:0,11:11:33.09:365,33,0	1/1:6,24:30:69.14:737,69,0	0/0:17,0:18:47:0,47,393	1/1:7,31:38:90.23:988,90,0	1/1:4,23:27:63.17:697,63,0	1/1:4,24:28:69.18:757,69,0	1/1:1,18:19:42.11:465,42,0	1/1:2,16:20:56.82:592,57,0	1/1:4,16:20:36.10:398,36,0	1/1:5,21:26:34.11:605,34,0	0/0:25,0:25:59.99:0,60,521	0/0:18,0:18:44.98:0,45,391	1/1:2,20:22:37.09:625,37,0	1/1:3,40:44:99:1183,111,0	1/1:3,10:13:33.09:364,33,0	1/1:5,29:34:87.24:962,87,0	1/1:5,18:23:24.77:491,25,0	1/1:1,24:25:66.18:730,66,0	1/1:3,26:29:26.10:744,26,0	1/1:4,17:21:28.09:538,28,0	1/1:0,29:29:69.18:763,69,0	1/1:3,7:11:26.91:279,27,0
chr10	29026020	.	GA	G	9766.87	PASS	AB=0.603;AC=49;AF=0.875;AN=56;BaseQRankSum=-3.796;DP=589;FS=0.773;HRun=11;HaplotypeScore=69.3758;InbreedingCoeff=0.4136;MQ=80.06;MQ0=0;MQRankSum=-3.197;QD=17.82;ReadPosRankSum=4.283;VQSLOD=5.7843;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,24:29:65.90:542,66,0	1/1:1,10:11:26.96:222,27,0	0/0:25,0:24:30.40:0,30,284	0/0:15,0:15:5.79:0,6,41	1/1:4,14:18:3.94:239,4,0	1/1:0,25:25:71.92:591,72,0	0/1:4,6:11:8.97:131,0,9	1/1:6,24:31:70.93:569,71,0	1/1:11,18:30:38.94:449,39,0	1/1:6,13:19:38.95:320,39,0	0/1:9,11:20:22.05:250,0,22	1/1:2,10:12:26.97:222,27,0	1/1:2,12:14:29.96:246,30,0	1/1:3,13:16:40.98:326,41,0	1/1:2,23:27:64:504,64,0	1/1:5,19:24:50.93:419,51,0	1/1:3,19:22:56.93:468,57,0	1/1:5,24:29:47.99:499,48,0	1/1:6,10:17:2.97:220,3,0	1/1:8,15:23:47.92:393,48,0	1/1:6,13:19:38.94:320,39,0	1/1:1,21:22:56.93:468,57,0	0/1:3,13:16:20.26:210,0,20	1/1:3,22:27:61:480,61,0	1/1:2,19:21:47.94:394,48,0	1/1:1,25:26:74.90:613,75,0	1/1:5,26:32:64.48:523,64,0	1/1:1,6:7:17.97:148,18,0
chr10	29027283	.	AGTGTGTGT	A	7696.85	PASS	AB=0.636;AC=41;AF=0.732;AN=56;BaseQRankSum=-4.626;DP=927;FS=3.120;HRun=0;HaplotypeScore=302.4831;InbreedingCoeff=0.3918;MQ=49.37;MQ0=21;MQRankSum=-6.887;QD=10.56;ReadPosRankSum=-4.082;VQSLOD=2.8647;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:23,27:49:15.37:242,15,0	1/1:5,4:9:8.99:128,9,0	0/0:47,0:16:3.01:0,3,33	0/0:50,0:20:2.99:0,3,24	1/1:7,14:23:2.20:3,2,0	1/1:15,19:37:12.73:269,13,0	0/1:11,20:33:62.20:63,0,62	1/1:40,17:56:36.55:528,37,0	0/0:15,0:39:66.06:0,66,1225	1/1:16,17:35:45.10:985,45,0	1/1:6,8:17:4.66:17,5,0	1/1:13,21:36:21.15:503,21,0	1/1:12,20:34:45.53:973,46,0	0/1:13,13:26:9.41:259,0,9	1/1:11,23:35:5.93:105,6,0	1/1:20,28:50:41.99:798,42,0	0/0:17,0:34:18.27:0,18,738	0/0:18,0:26:23.68:0,24,660	1/1:10,8:16:10.67:429,11,0	0/1:10,14:26:2.79:297,0,3	1/1:44,28:72:0.84:3,1,0	0/1:12,12:26:13.97:45,0,14	1/1:9,9:19:0.47:1,0,0	1/1:24,2:25:6.49:123,6,0	1/1:14,10:27:5.32:73,5,0	0/1:14,12:30:14.83:915,0,15	1/1:17,10:28:29.99:509,30,0	1/1:3,6:10:18.18:426,18,0
chr10	29027516	.	TTGTG	T	16196.43	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-2.235;DP=619;FS=9.797;HRun=0;HaplotypeScore=121.3003;InbreedingCoeff=0.8004;MQ=57.63;MQ0=10;MQRankSum=1.463;QD=28.27;ReadPosRankSum=3.613;VQSLOD=4.2620;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,22:32:41.49:672,41,0	1/1:0,11:11:18.06:301,18,0	0/0:26,0:7:15.05:0,15,295	0/0:20,0:8:11.58:0,12,198	1/1:6,18:25:51.17:831,51,0	1/1:5,11:16:27.09:452,27,0	1/1:4,16:22:20.16:459,20,0	1/1:10,21:32:66.20:1050,66,0	1/1:4,12:16:27.09:451,27,0	1/1:10,11:21:5.89:536,6,0	1/1:5,17:25:41.92:657,42,0	1/1:7,11:18:33.11:552,33,0	1/1:7,11:18:21.07:351,21,0	1/1:4,20:25:30.10:502,30,0	1/1:4,23:27:63.22:1053,63,0	1/1:3,20:23:39.13:652,39,0	1/1:9,23:35:29.43:761,29,0	1/1:3,5:8:11.66:200,12,0	1/1:7,9:16:1.04:365,1,0	1/1:4,29:32:69.19:1123,69,0	1/1:3,19:23:48.15:759,48,0	1/1:5,19:24:32.85:552,33,0	1/1:5,18:23:38.29:651,38,0	1/1:2,10:12:23.79:401,24,0	1/1:3,18:21:44.89:752,45,0	1/1:7,21:27:60.14:929,60,0	1/1:5,16:22:24.48:682,24,0	1/1:4,10:14:30.10:502,30,0
chr10	29029099	.	AG	A	16163.85	PASS	AB=0.804;AC=54;AF=0.964;AN=56;BaseQRankSum=-3.046;DP=514;FS=5.092;HRun=4;HaplotypeScore=110.6284;InbreedingCoeff=-0.0389;MQ=69.45;MQ0=0;MQRankSum=-3.417;QD=31.45;ReadPosRankSum=3.197;VQSLOD=4.5911;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,29:31:66.20:788,66,0	1/1:0,5:5:15.05:180,15,0	0/1:6,11:17:43.21:192,0,43	0/1:7,0:7:54.82:70,0,55	1/1:0,15:15:39.12:464,39,0	1/1:1,25:26:69.21:821,69,0	1/1:2,19:21:54.16:647,54,0	1/1:1,21:22:63.19:755,63,0	1/1:1,19:20:57.17:677,57,0	1/1:1,22:23:66.20:792,66,0	1/1:0,21:21:60.18:719,60,0	1/1:1,18:19:48.14:569,48,0	1/1:0,19:19:54.17:647,54,0	1/1:0,15:15:42.13:504,42,0	1/1:3,17:20:51.16:609,51,0	1/1:0,29:29:84.26:1005,84,0	1/1:2,24:26:66.20:789,66,0	1/1:1,8:9:24.07:288,24,0	1/1:1,19:20:57.12:656,57,0	1/1:0,17:17:48.15:575,48,0	1/1:1,32:33:96.29:1151,96,0	1/1:0,12:12:36.11:431,36,0	1/1:0,13:13:36.10:431,36,0	1/1:0,15:15:39.12:467,39,0	1/1:1,10:11:30.09:360,30,0	1/1:1,19:20:57.17:679,57,0	1/1:1,23:24:63.19:755,63,0	1/1:0,4:4:12.04:144,12,0
chr10	29031314	.	A	AGTGTGTGTGT	14266.58	PASS	AB=0.922;AC=48;AF=0.923;AN=52;BaseQRankSum=-3.812;DP=729;FS=7.172;HRun=0;HaplotypeScore=231.7428;InbreedingCoeff=0.0325;MQ=60.79;MQ0=23;MQRankSum=1.791;QD=20.89;ReadPosRankSum=1.156;VQSLOD=3.2147;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:39,0:38:23.84:509,24,0	1/1:7,0:7:5.94:136,6,0	./.	0/1:47,0:26:0:0,0,0	1/1:12,10:25:11.78:329,12,0	1/1:19,11:30:27.09:1003,27,0	1/1:23,0:30:17.28:463,17,0	1/1:46,0:46:48.90:1309,49,0	0/1:19,0:33:5.33:397,0,5	1/1:27,0:24:36.11:959,36,0	1/1:14,0:18:2.97:64,3,0	1/1:17,9:26:9.95:384,10,0	1/1:15,13:30:30.10:1004,30,0	1/1:11,0:11:5.99:145,6,0	1/1:25,1:34:20.99:820,21,0	1/1:11,7:19:12.04:504,12,0	1/1:38,0:37:45.76:1199,46,0	0/1:9,0:9:17.52:53,0,18	1/1:24,0:23:21.07:505,21,0	1/1:24,6:30:26.84:754,27,0	0/1:29,0:25:46.75:158,0,47	1/1:19,4:22:9.03:168,9,0	1/1:16,1:17:8.87:287,9,0	./.	1/1:15,8:25:11.96:493,12,0	1/1:26,0:22:42.09:1216,42,0	1/1:13,6:19:30.02:1025,30,0	1/1:8,0:6:15.01:385,15,0
chr10	29033712	.	C	CT	6656.76	PASS	AB=0.612;AC=38;AF=0.679;AN=56;BaseQRankSum=-6.649;DP=568;FS=14.514;HRun=13;HaplotypeScore=70.6567;InbreedingCoeff=0.2867;MQ=71.72;MQ0=1;MQRankSum=1.021;QD=13.93;ReadPosRankSum=-0.677;VQSLOD=3.6940;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:15,20:34:84.08:727,84,0	1/1:5,5:11:0.27:129,0,0	0/0:20,0:10:10.26:0,10,75	0/0:17,0:16:2.92:0,3,32	0/1:7,16:26:32.56:339,0,33	1/1:3,15:18:3.79:309,4,0	0/1:3,7:10:0.10:169,0,0	0/1:17,23:40:3.08:422,0,3	0/0:21,0:21:50.48:0,50,344	1/1:8,19:28:10.97:352,11,0	1/1:5,17:24:52.66:412,53,0	0/1:8,15:24:51.89:247,0,52	1/1:5,12:17:18.46:310,18,0	1/1:7,8:16:15.54:250,16,0	0/1:5,8:13:5.54:96,0,6	1/1:3,21:27:48.61:408,49,0	0/0:19,0:19:50.51:0,51,346	0/0:11,0:11:20.78:0,21,141	1/1:12,16:29:15.76:415,16,0	0/1:12,12:24:24.23:215,0,24	1/1:5,6:11:15.02:139,15,0	1/1:6,6:12:0.44:147,0,0	0/1:5,13:18:8.26:218,0,8	1/1:4,11:15:21.02:195,21,0	1/1:7,24:32:16.19:415,16,0	1/1:4,14:19:21.30:328,21,0	1/1:8,16:24:24.48:368,24,0	0/1:2,3:5:11.57:47,0,12
chr10	29035494	.	CT	C	7553.48	PASS	AB=0.659;AC=48;AF=0.857;AN=56;BaseQRankSum=-0.091;DP=557;FS=4.982;HRun=12;HaplotypeScore=66.8320;InbreedingCoeff=0.3699;MQ=68.86;MQ0=4;MQRankSum=-0.656;QD=14.53;ReadPosRankSum=3.120;VQSLOD=5.7037;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,36:43:95.60:743,96,0	1/1:4,2:7:10.98:73,11,0	0/0:18,0:6:5.37:0,5,34	0/0:18,0:12:13.57:0,14,74	1/1:6,14:21:15.43:282,15,0	1/1:4,14:20:39.92:289,40,0	1/1:4,4:8:11.94:93,12,0	0/1:16,6:23:10.56:102,0,11	1/1:4,12:17:28.93:215,29,0	1/1:6,15:21:44.80:348,45,0	1/1:6,17:23:41.76:325,42,0	1/1:3,9:12:26.88:209,27,0	1/1:0,18:18:47.82:371,48,0	1/1:7,16:23:8.31:246,8,0	0/1:4,8:13:1.31:163,0,1	1/1:3,15:18:47.04:355,47,0	1/1:2,27:30:79.73:609,80,0	1/1:4,8:12:20.91:163,21,0	1/1:10,9:20:28.88:211,29,0	1/1:10,27:37:74.62:580,75,0	1/1:3,9:15:27.02:180,27,0	1/1:6,23:29:65.70:511,66,0	1/1:11,14:25:14.35:295,14,0	1/1:4,6:10:17.91:139,18,0	0/1:9,7:16:39.99:95,0,40	1/1:6,20:28:63.82:476,64,0	1/1:3,21:24:4.99:403,5,0	0/1:2,5:6:5.62:78,0,6
chr10	29037989	.	AT	A	14666.87	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=9.619;DP=641;FS=7.000;HRun=5;HaplotypeScore=83.1152;InbreedingCoeff=0.9516;MQ=54.62;MQ0=4;MQRankSum=2.813;QD=29.10;ReadPosRankSum=1.814;VQSLOD=5.3343;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,99,1337	1/1:0,7:7:21.06:238,21,0	0/0:16,0:5:11.71:0,12,127	0/0:15,0:4:9.03:0,9,117	1/1:1,17:18:42.12:476,42,0	1/1:0,20:20:48.14:544,48,0	1/1:3,23:25:54.15:612,54,0	1/1:3,22:20:57.06:607,57,0	0/0:26,0:26:75.25:0,75,1023	1/1:2,27:27:72.20:817,72,0	1/1:0,12:12:33.09:374,33,0	1/1:1,27:28:72.21:816,72,0	1/1:2,24:26:66.19:748,66,0	1/1:1,27:28:78.22:884,78,0	1/1:2,30:32:78.22:885,78,0	1/1:3,33:35:49.34:946,49,0	0/0:19,0:19:57.16:0,57,759	0/0:24,0:24:72.20:0,72,962	1/1:2,22:23:63.18:715,63,0	1/1:2,23:25:69.20:783,69,0	1/1:0,35:34:99:1157,102,0	1/1:2,18:20:48.14:544,48,0	1/1:1,23:24:66.05:749,66,0	1/1:1,18:19:51.15:579,51,0	1/1:1,14:15:4.25:436,4,0	1/1:0,26:26:78.21:874,78,0	1/1:1,20:21:54.15:613,54,0	1/1:0,8:8:24.07:272,24,0
chr10	29038126	.	T	TGTGT	3975.10	PASS	AB=1.000;AC=49;AF=0.980;AN=50;BaseQRankSum=-1.492;DP=618;FS=0.000;HRun=0;HaplotypeScore=138.0534;InbreedingCoeff=-0.0610;MQ=53.08;MQ0=19;MQRankSum=0.316;QD=7.36;ReadPosRankSum=1.361;VQSLOD=2.6183;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:51,0:49:14.52:237,15,0	1/1:8,0:8:2.80:24,3,0	./.	./.	1/1:19,0:16:8.97:70,9,0	1/1:31,0:31:17.99:192,18,0	1/1:20,0:19:5.99:48,6,0	1/1:28,0:18:4.53:25,5,0	1/1:29,0:28:2.74:50,3,0	1/1:20,0:18:18.03:245,18,0	1/1:15,0:14:9.02:104,9,0	1/1:20,0:19:11.98:184,12,0	1/1:13,0:13:15:197,15,0	1/1:17,0:17:11.76:122,12,0	1/1:26,0:25:21.48:346,21,0	1/1:15,4:19:9.01:165,9,0	1/1:12,0:11:5.97:47,6,0	1/1:14,0:11:8.93:63,9,0	1/1:18,0:17:21.77:262,22,0	1/1:26,0:23:11.99:151,12,0	1/1:34,0:32:16.79:167,17,0	1/1:20,0:18:12.02:209,12,0	1/1:13,0:12:2.88:16,3,0	1/1:30,0:30:27.36:291,27,0	0/1:22,0:22:7.82:272,0,8	1/1:15,0:15:16.08:151,16,0	1/1:19,0:19:26.81:338,27,0	./.
chr10	29038146	.	T	TGTGT	4002.85	PASS	AB=1.000;AC=49;AF=0.980;AN=50;BaseQRankSum=-1.565;DP=597;FS=0.000;HRun=0;HaplotypeScore=120.4225;InbreedingCoeff=-0.0604;MQ=45.65;MQ0=31;MQRankSum=0.745;QD=7.74;ReadPosRankSum=0.335;VQSLOD=2.2101;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:50,0:48:15.73:240,16,0	1/1:8,0:8:2.80:24,3,0	./.	./.	1/1:19,0:16:8.97:70,9,0	1/1:26,0:26:17.99:192,18,0	1/1:27,0:26:5.98:48,6,0	1/1:22,0:13:4.53:25,5,0	1/1:26,0:25:2.74:50,3,0	1/1:15,0:13:18.03:245,18,0	1/1:13,0:12:9.02:104,9,0	1/1:12,4:16:11.98:184,12,0	1/1:14,0:14:18.01:236,18,0	1/1:21,0:21:11.76:122,12,0	1/1:23,0:22:21.48:346,21,0	1/1:21,0:20:9.01:165,9,0	1/1:13,0:12:5.98:49,6,0	1/1:14,0:10:8.93:63,9,0	1/1:16,0:14:21.77:262,22,0	1/1:23,0:20:11.99:151,12,0	1/1:32,0:30:17.26:167,17,0	1/1:21,0:19:12.02:209,12,0	1/1:10,0:9:2.88:16,3,0	1/1:29,0:29:24.43:274,24,0	0/1:25,0:25:7.82:272,0,8	1/1:12,0:12:16.08:151,16,0	1/1:20,0:20:26.42:338,26,0	./.
chr10	29038152	.	T	TGTGTGTGT	3717.89	PASS	AB=1.000;AC=45;AF=0.900;AN=50;BaseQRankSum=-4.658;DP=606;FS=4.382;HRun=0;HaplotypeScore=144.3258;InbreedingCoeff=0.0143;MQ=45.68;MQ0=30;MQRankSum=-0.873;QD=7.44;ReadPosRankSum=-1.131;VQSLOD=2.4428;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:47,0:45:16.58:59,0,17	1/1:8,0:8:0.93:20,1,0	./.	./.	0/0:19,0:16:1.72:0,2,4	1/1:27,0:27:17.53:243,18,0	1/1:26,0:25:6.02:96,6,0	1/1:26,0:17:4.56:45,5,0	1/1:9,16:25:2.07:116,2,0	1/1:15,0:13:18.04:291,18,0	1/1:13,0:12:9.02:121,9,0	1/1:19,0:18:8:87,8,0	1/1:15,0:15:15.01:166,15,0	1/1:20,0:20:10.41:127,10,0	1/1:25,0:25:20.53:271,21,0	1/1:24,0:23:9.03:158,9,0	0/1:14,0:13:14.70:27,0,15	1/1:14,0:10:9:106,9,0	1/1:17,0:16:22.47:280,22,0	1/1:21,0:18:7.83:113,8,0	1/1:29,0:27:16.98:218,17,0	1/1:17,0:15:12.02:148,12,0	1/1:10,0:9:2.90:17,3,0	1/1:29,0:30:24.22:303,24,0	0/1:25,0:25:38.54:250,0,39	1/1:11,0:11:17.75:197,18,0	1/1:21,0:21:19.97:260,20,0	./.
chr10	29038162	.	T	TGTGT	4070.66	PASS	AB=1.000;AC=49;AF=0.980;AN=50;BaseQRankSum=-1.414;DP=594;FS=0.000;HRun=0;HaplotypeScore=120.3620;InbreedingCoeff=-0.0606;MQ=46.84;MQ0=27;MQRankSum=-0.076;QD=7.84;ReadPosRankSum=1.155;VQSLOD=2.7113;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:40,0:38:14.49:237,14,0	1/1:10,0:10:2.80:24,3,0	./.	./.	1/1:18,0:17:8.97:70,9,0	1/1:23,0:23:17.99:191,18,0	1/1:25,0:24:5.98:48,6,0	1/1:29,0:23:5.99:58,6,0	1/1:23,0:22:2.74:50,3,0	1/1:18,0:16:21.04:284,21,0	1/1:15,0:14:9.02:104,9,0	1/1:22,0:21:11.98:184,12,0	1/1:18,0:18:15:197,15,0	1/1:20,0:20:11.76:122,12,0	1/1:25,0:25:21.48:346,21,0	1/1:24,0:23:9.01:165,9,0	1/1:14,0:13:5.98:49,6,0	1/1:12,0:8:9.40:63,9,0	1/1:19,0:18:21.77:262,22,0	1/1:14,5:18:11.99:151,12,0	1/1:21,0:20:16.79:166,17,0	1/1:20,0:18:12.02:209,12,0	1/1:12,0:11:2.88:16,3,0	1/1:31,0:31:24.43:274,24,0	0/1:25,0:25:7.82:272,0,8	1/1:10,0:10:16.08:151,16,0	1/1:24,0:24:29.43:376,29,0	./.
chr10	29039309	.	GT	G	6448.09	PASS	AB=0.938;AC=48;AF=0.857;AN=56;BaseQRankSum=7.466;DP=528;FS=0.586;HRun=13;HaplotypeScore=102.3736;InbreedingCoeff=0.7354;MQ=58.63;MQ0=6;MQRankSum=1.465;QD=13.49;ReadPosRankSum=0.531;VQSLOD=4.7428;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:33:49.56:147,50,0	1/1:4,7:12:13.45:161,13,0	0/0:11,0:5:2.94:0,3,18	0/1:7,0:5:1.76:2,0,5	1/1:9,22:31:72.42:523,72,0	1/1:5,20:26:44.16:366,44,0	1/1:4,10:14:20.85:153,21,0	1/1:9,7:15:20.83:151,21,0	0/1:12,2:14:7.65:8,0,245	1/1:1,22:23:64.98:463,65,0	1/1:2,23:25:68.22:491,68,0	1/1:2,9:11:20.87:153,21,0	1/1:5,13:19:42.64:308,43,0	1/1:1,10:11:23.82:175,24,0	1/1:2,15:18:35.73:262,36,0	1/1:5,17:21:19.44:301,19,0	0/0:5,0:18:40.24:0,40,233	0/0:6,0:21:37.09:0,37,200	1/1:8,11:20:31.28:209,31,0	1/1:9,26:35:70.87:504,71,0	1/1:7,8:17:16.35:153,16,0	1/1:6,18:23:50.65:367,51,0	1/1:8,14:22:35.48:246,35,0	1/1:5,6:10:14.91:109,15,0	1/1:3,10:13:35.63:251,36,0	1/1:2,18:20:50.63:371,51,0	1/1:2,19:21:45.11:382,45,0	1/1:3,10:12:26.85:197,27,0
chr10	29040825	.	CTG	C	10956.58	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=12.058;DP=493;FS=21.279;HRun=0;HaplotypeScore=80.0630;InbreedingCoeff=0.9623;MQ=51.66;MQ0=11;MQRankSum=-7.522;QD=32.42;ReadPosRankSum=2.141;VQSLOD=4.9953;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,1:33:84.21:0,84,1463	1/1:1,12:13:33.11:479,33,0	0/0:29,0:21:60.21:0,60,1111	0/0:24,0:22:54.18:0,54,1000	1/1:0,24:24:54.18:793,54,0	1/1:1,24:24:60.20:873,60,0	1/1:0,14:12:24.08:352,24,0	1/1:2,17:17:45.05:612,45,0	0/0:17,0:17:51.16:0,51,923	1/1:2,18:20:53.99:696,54,0	1/1:2,16:16:21.07:308,21,0	1/1:0,14:14:42.14:616,42,0	1/1:1,11:12:27.09:396,27,0	1/1:0,11:11:33.11:484,33,0	1/1:0,18:18:45.15:653,45,0	1/1:0,7:7:21.07:309,21,0	0/0:28,0:27:75.26:0,75,1389	0/0:23,1:24:22.07:0,22,1134	1/1:1,7:7:18.02:240,18,0	1/1:2,28:24:66.22:969,66,0	1/1:1,5:4:6.02:88,6,0	1/1:2,13:15:30.10:440,30,0	1/1:2,10:12:24.08:353,24,0	1/1:0,5:5:9.03:125,9,0	1/1:0,13:13:36.12:521,36,0	1/1:3,20:23:54.18:793,54,0	1/1:0,14:14:33.08:462,33,0	1/1:3,14:16:27.09:396,27,0
chr10	29041095	.	TAA	T	1632.98	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-8.003;DP=439;FS=11.867;HRun=12;HaplotypeScore=79.7036;InbreedingCoeff=0.9513;MQ=56.84;MQ0=2;MQRankSum=0.526;QD=21.21;ReadPosRankSum=4.700;VQSLOD=1.8634;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,31:31:72.16:732,72,0	0/0:2,0:6:7.49:0,7,26	0/0:15,0:7:17.62:0,18,145	0/0:8,0:6:9.02:0,9,110	0/0:21,0:22:53.66:0,54,746	0/0:15,0:15:42:0,42,532	0/0:21,0:22:59.65:0,60,833	0/0:22,0:19:47.65:0,48,670	1/1:1,10:11:32.81:317,33,0	0/0:17,0:19:51.12:0,51,709	0/0:20,0:19:45.06:0,45,601	0/0:8,0:8:21.07:0,21,306	0/0:9,0:9:27.09:0,27,393	0/0:11,0:11:29.98:0,30,357	0/0:13,0:14:38.58:0,39,519	0/0:12,0:13:35.53:0,36,436	1/1:3,22:26:54.10:548,54,0	1/1:2,6:8:20.83:196,21,0	0/0:15,0:16:44:0,44,476	0/0:16,0:16:39.02:0,39,471	0/0:5,0:5:15.02:0,15,178	0/0:9,0:10:20.55:0,21,257	0/0:19,0:19:50.61:0,51,694	0/0:17,0:17:39.09:0,39,540	0/0:12,0:12:24:0,24,310	0/0:10,0:10:27.09:0,27,399	0/0:27,0:27:74.67:0,75,978	0/0:21,0:21:45.09:0,45,607
chr10	29041601	.	CAA	C	599.71	PASS	AB=0.984;AC=15;AF=0.268;AN=56;BaseQRankSum=-0.697;DP=420;FS=6.600;HRun=13;HaplotypeScore=97.6096;InbreedingCoeff=0.2387;MQ=54.33;MQ0=8;MQRankSum=0.938;QD=3.66;ReadPosRankSum=2.510;VQSLOD=-0.3487;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:19:44.82:0,45,578	0/1:9,0:10:8.90:9,0,10	0/1:35,0:13:13.70:14,0,73	0/1:19,2:6:22.18:22,0,27	0/0:19,0:21:1.08:0,1,16	0/0:7,0:13:16.86:0,17,79	0/0:13,0:12:16.93:0,17,107	0/1:18,0:14:6.78:7,0,45	1/1:8,11:20:32.93:369,33,0	0/0:21,0:18:37.02:0,37,314	0/0:14,0:13:13.32:0,13,65	0/1:8,0:9:6.01:6,0,112	0/0:11,0:11:10.19:0,10,74	0/1:11,0:11:5.15:9,0,5	0/0:18,0:20:18.32:0,18,169	0/0:8,0:9:7.74:0,8,55	1/1:2,8:9:17.54:174,18,0	1/1:2,5:7:12.01:117,12,0	0/1:15,0:17:27.29:27,0,153	0/0:4,0:7:1.88:0,2,14	0/0:7,0:7:4.60:0,5,74	0/0:18,0:18:14.02:0,14,169	0/0:10,0:10:7.32:0,7,77	0/0:7,0:7:2.61:0,3,19	0/0:10,0:11:13.71:0,14,124	0/0:28,1:29:5.63:0,6,239	0/0:22,0:23:12.93:0,13,168	1/1:3,0:3:1.23:3,1,0
chr10	29041613	.	AAG	A	1635.41	PASS	AB=0.968;AC=39;AF=0.696;AN=56;BaseQRankSum=-0.061;DP=323;FS=7.484;HRun=0;HaplotypeScore=85.5521;InbreedingCoeff=-0.2736;MQ=55.05;MQ0=10;MQRankSum=0.214;QD=5.38;ReadPosRankSum=0.243;VQSLOD=1.6646;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:36.10:0,36,614	1/1:4,0:4:11.03:92,11,0	0/1:29,0:10:13.33:13,0,53	0/1:18,0:4:2.32:2,0,32	0/1:10,1:10:1.49:127,0,1	1/1:10,0:10:16.81:80,17,0	0/1:10,0:9:14.59:90,0,15	0/1:16,2:13:38.58:39,0,121	1/1:20,0:20:3.30:73,3,0	0/1:19,0:16:91.25:91,0,105	1/1:9,1:9:17.01:97,17,0	0/1:6,1:7:33.32:33,0,58	1/1:9,0:9:12.13:78,12,0	1/1:7,1:8:8.46:65,8,0	0/1:13,0:13:30.56:83,0,31	1/1:9,0:9:1.32:88,1,0	0/1:12,0:11:16.69:23,0,17	1/1:6,0:6:7.73:23,8,0	0/1:11,3:14:99:128,0,116	1/1:7,0:5:11.39:74,11,0	0/1:6,0:6:15.17:15,0,90	0/1:8,0:8:40.50:40,0,70	1/1:8,0:8:10.71:91,11,0	1/1:5,0:5:3.43:20,3,0	0/1:6,0:6:12.51:13,0,43	0/1:20,0:20:39.85:162,0,40	0/1:15,0:15:40.81:124,0,41	1/1:2,0:2:3:25,3,0
chr10	29041622	.	AAAAGAAAG	A	1258.34	PASS	AB=1.000;AC=39;AF=0.929;AN=42;BaseQRankSum=3.011;DP=306;FS=7.501;HRun=0;HaplotypeScore=144.7386;InbreedingCoeff=0.3620;MQ=48.41;MQ0=10;MQRankSum=-3.270;QD=6.02;ReadPosRankSum=-1.549;VQSLOD=1.7664;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:17:20.91:0,21,162	1/1:6,0:6:7.37:65,7,0	./.	./.	1/1:13,0:12:5.39:23,5,0	1/1:11,0:11:1.72:5,2,0	./.	./.	1/1:16,3:19:24.04:454,24,0	1/1:18,0:15:13.73:77,14,0	1/1:8,0:7:4.41:14,4,0	./.	1/1:9,0:9:1.82:5,2,0	0/1:7,0:7:0:0,0,0	1/1:10,0:10:4.61:18,5,0	1/1:8,0:8:7.18:76,7,0	1/1:11,1:11:6.02:120,6,0	1/1:3,1:4:5.96:44,6,0	1/1:18,0:17:5.91:70,6,0	1/1:6,0:4:5.91:71,6,0	./.	1/1:8,0:8:5.78:32,6,0	1/1:11,0:11:11.30:60,11,0	./.	1/1:8,0:8:4.05:9,4,0	1/1:16,0:16:16.33:154,16,0	1/1:16,0:16:2.04:6,2,0	1/1:1,0:1:3.01:54,3,0
chr10	29041627	.	AAAG	A	899.59	PASS	AB=1.000;AC=44;AF=0.815;AN=54;BaseQRankSum=6.478;DP=278;FS=3.343;HRun=0;HaplotypeScore=118.7063;InbreedingCoeff=0.2036;MQ=40.19;MQ0=8;MQRankSum=-2.015;QD=3.47;ReadPosRankSum=-1.269;VQSLOD=2.4063;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:20,0:20:34.18:34,0,210	1/1:5,1:6:10.96:60,11,0	1/1:15,0:3:2.80:13,3,0	./.	1/1:12,0:11:15.20:52,15,0	1/1:11,0:11:14.33:45,14,0	1/1:8,0:7:2.03:11,2,0	1/1:15,0:11:14.13:40,14,0	0/1:19,0:19:33.37:33,0,288	1/1:17,0:14:19.08:111,19,0	1/1:6,1:7:11.05:46,11,0	0/0:4,0:4:0.13:0,0,12	1/1:8,0:8:7.47:21,7,0	0/1:6,0:6:0.48:2,0,0	0/1:9,0:9:12.24:12,0,14	1/1:5,1:6:13.06:79,13,0	0/1:11,0:11:0.08:0,0,177	0/0:4,0:4:12.04:0,12,139	1/1:15,1:15:17.04:95,17,0	1/1:5,1:4:4.42:48,4,0	1/1:5,0:5:4.76:25,5,0	1/1:6,0:6:9.20:41,9,0	1/1:10,0:10:11.22:46,11,0	1/1:8,0:8:7.14:32,7,0	1/1:8,0:8:5.69:19,6,0	1/1:14,1:15:20.30:116,20,0	0/1:14,0:14:5.42:10,0,5	1/1:0,1:1:3.01:41,3,0
chr10	29041628	.	AAG	A	531.13	PASS	AB=0.974;AC=25;AF=0.463;AN=54;BaseQRankSum=6.933;DP=271;FS=10.147;HRun=0;HaplotypeScore=114.4778;InbreedingCoeff=-0.0243;MQ=40.04;MQ0=8;MQRankSum=-3.457;QD=2.78;ReadPosRankSum=-3.262;VQSLOD=0.4144;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:4.74:0,5,223	1/1:6,0:6:9.98:41,10,0	1/1:14,0:3:1.82:5,2,0	./.	0/1:12,0:11:30.16:30,0,35	0/1:11,0:11:10.37:10,0,27	0/0:8,0:7:13.91:0,14,68	0/0:15,0:11:23.76:0,24,107	0/1:12,6:18:99:110,0,315	0/1:17,0:14:41.51:42,0,44	1/1:7,0:7:6.03:32,6,0	0/0:4,0:4:10.38:0,10,49	0/1:7,0:7:1.53:2,0,16	0/0:6,0:6:2.29:0,2,6	0/0:8,0:8:0.72:0,1,48	1/1:6,0:6:12.13:65,12,0	0/1:9,1:10:74.41:74,0,204	0/0:4,0:4:12.04:0,12,162	0/1:16,0:15:17.19:17,0,66	0/1:6,0:4:4.89:34,0,5	0/0:5,0:5:13.76:0,14,64	0/1:6,0:6:26.96:27,0,41	0/1:10,0:10:7.24:52,0,7	1/1:8,0:8:8.15:33,8,0	0/1:8,0:8:9.51:10,0,21	0/1:15,0:15:5.12:83,0,5	0/1:13,0:13:1.86:2,0,61	1/1:1,0:1:2.97:20,3,0
chr10	29041630	.	G	GA	985.86	PASS	AB=0.952;AC=41;AF=0.759;AN=54;BaseQRankSum=5.901;DP=264;FS=2.255;HRun=3;HaplotypeScore=110.4066;InbreedingCoeff=0.5130;MQ=37.33;MQ0=7;MQRankSum=-4.864;QD=5.27;ReadPosRankSum=-2.973;VQSLOD=-0.4744;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:46.42:0,46,375	1/1:5,1:6:6.58:38,7,0	1/1:10,0:1:2.99:23,3,0	./.	1/1:12,0:11:18.29:93,18,0	1/1:8,3:11:19.77:170,20,0	1/1:6,2:7:10.25:68,10,0	0/0:15,0:11:7.54:0,8,27	0/0:20,0:20:26.43:0,26,283	1/1:16,1:14:11.07:75,11,0	1/1:4,3:7:6.94:54,7,0	0/1:4,0:4:1.29:1,0,14	1/1:6,1:7:3.89:34,4,0	1/1:6,0:6:3.28:23,3,0	0/1:7,0:7:10.45:10,0,12	1/1:6,0:6:8.03:73,8,0	0/0:10,0:10:12.39:0,12,183	0/0:4,0:4:9.03:0,9,108	1/1:15,0:14:0.02:32,0,0	1/1:6,0:4:5.94:23,6,0	1/1:5,0:5:4.55:17,5,0	0/1:5,1:6:0.57:23,0,1	1/1:8,2:10:16.22:92,16,0	1/1:7,1:8:11.66:98,12,0	1/1:7,1:8:8.39:61,8,0	1/1:13,2:15:14.92:77,15,0	1/1:10,2:12:10.10:56,10,0	1/1:1,0:1:2.04:6,2,0
chr10	29041631	.	AAAG	A	1936.69	PASS	AB=1.000;AC=46;AF=0.852;AN=54;BaseQRankSum=6.928;DP=263;FS=0.000;HRun=0;HaplotypeScore=113.6630;InbreedingCoeff=0.3040;MQ=37.22;MQ0=7;MQRankSum=-3.074;QD=8.07;ReadPosRankSum=-0.349;VQSLOD=2.8688;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:19,0:19:33.53:34,0,190	1/1:6,0:6:14.35:109,14,0	1/1:10,0:1:2.99:23,3,0	./.	1/1:10,2:11:25.22:144,25,0	1/1:11,0:11:26.67:223,27,0	1/1:8,0:7:10.25:68,10,0	1/1:15,0:11:12.52:33,13,0	0/1:19,0:19:11.84:12,0,276	1/1:15,2:14:23.35:151,23,0	1/1:7,0:7:11.29:70,11,0	0/1:4,0:4:1.91:2,0,4	1/1:7,0:7:5.98:53,6,0	1/1:6,0:6:2.81:23,3,0	0/1:7,0:7:8.41:30,0,8	1/1:5,1:6:14.98:142,15,0	0/0:10,0:10:12.65:0,13,237	0/0:4,0:4:9.03:0,9,104	1/1:13,2:14:20.76:126,21,0	1/1:5,1:4:8.84:72,9,0	1/1:5,0:5:7.13:32,7,0	1/1:4,2:6:2.73:65,3,0	1/1:9,1:10:24.69:161,25,0	1/1:8,0:8:11.60:81,12,0	1/1:8,0:8:13.90:83,14,0	1/1:13,2:15:30.85:229,31,0	1/1:12,0:12:11.81:76,12,0	1/1:1,0:1:3.01:34,3,0
chr10	29041634	.	G	GA	1159.35	PASS	AB=0.933;AC=32;AF=0.593;AN=54;BaseQRankSum=9.776;DP=248;FS=1.206;HRun=3;HaplotypeScore=109.8574;InbreedingCoeff=0.2423;MQ=36.87;MQ0=7;MQRankSum=-3.152;QD=6.94;ReadPosRankSum=-3.740;VQSLOD=-0.5771;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:49.93:0,50,420	1/1:5,1:6:14.03:78,14,0	1/1:7,1:1:2.60:10,3,0	./.	1/1:10,0:10:22.08:120,22,0	1/1:11,0:11:19.35:184,19,0	0/1:8,0:7:15.72:52,0,16	0/0:13,0:9:20.62:0,21,150	0/0:17,0:17:41.02:0,41,379	0/1:15,1:14:51.67:90,0,52	1/1:6,0:6:10.21:65,10,0	0/0:4,0:4:5.99:0,6,53	1/1:5,0:5:5.93:49,6,0	1/1:7,0:7:5.27:27,5,0	0/1:8,1:9:27.82:28,0,45	1/1:6,0:6:11.21:91,11,0	0/0:10,0:10:26.81:0,27,279	0/0:3,0:3:6.02:0,6,72	0/1:13,0:12:19.39:19,0,114	1/1:5,0:4:7.16:27,7,0	0/0:5,0:5:4.24:0,4,56	0/1:5,0:5:24.34:38,0,24	1/1:9,1:10:23.72:132,24,0	1/1:7,1:8:8.99:80,9,0	0/1:6,2:8:13.56:66,0,14	0/1:14,1:15:25.91:95,0,26	0/1:7,1:8:20.11:51,0,20	1/1:3,0:3:8.20:39,8,0
chr10	29041638	.	G	GA	1421.98	PASS	AB=0.912;AC=26;AF=0.481;AN=54;BaseQRankSum=9.731;DP=230;FS=8.215;HRun=3;HaplotypeScore=106.3907;InbreedingCoeff=-0.0372;MQ=33.40;MQ0=5;MQRankSum=-3.380;QD=9.36;ReadPosRankSum=-1.453;VQSLOD=0.2899;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:56.05:0,56,491	1/1:4,2:6:3.66:90,4,0	0/0:8,0:2:2.97:0,3,20	./.	0/1:6,2:8:6.38:81,0,6	0/1:8,3:11:46.04:80,0,46	0/0:6,0:5:3.27:0,3,33	0/1:11,0:8:23.18:23,0,31	0/0:17,0:17:38.06:0,38,372	0/1:11,1:12:42.44:134,0,42	1/1:7,0:7:11.04:92,11,0	0/0:2,0:2:6.01:0,6,64	1/1:4,1:5:8.61:72,9,0	1/1:4,0:4:5.80:43,6,0	0/1:7,1:8:45.93:131,0,46	1/1:4,2:6:9.60:94,10,0	0/0:10,0:10:26.82:0,27,298	0/0:2,0:2:6.02:0,6,72	0/1:12,0:11:41.73:42,0,119	0/1:5,0:4:21.35:49,0,21	0/0:5,0:5:7.25:0,7,68	0/1:5,0:5:29.93:42,0,30	1/1:7,3:10:2.96:128,3,0	0/1:6,1:7:4.37:28,0,4	0/1:6,1:7:25.17:106,0,25	0/1:13,2:15:23.06:214,0,23	0/1:9,1:10:73.34:73,0,77	1/1:3,0:3:8.60:65,9,0
chr10	29041639	.	AAAG	A	1835.33	PASS	AB=0.878;AC=28;AF=0.500;AN=56;BaseQRankSum=8.605;DP=229;FS=7.871;HRun=0;HaplotypeScore=110.8866;InbreedingCoeff=-0.1596;MQ=33.71;MQ0=4;MQRankSum=-2.552;QD=9.71;ReadPosRankSum=2.881;VQSLOD=2.6576;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:21,0:21:20.95:21,0,329	1/1:5,1:6:5.31:129,5,0	0/0:7,0:2:3.01:0,3,36	0/0:8,0:2:3.01:0,3,35	0/1:6,2:8:14.86:88,0,15	0/1:11,0:11:23.52:83,0,24	0/0:6,0:5:3.27:0,3,33	0/1:11,0:8:21.07:21,0,37	0/1:16,0:16:17.82:18,0,217	0/1:9,3:12:41.53:178,0,42	1/1:7,0:7:11.05:105,11,0	0/0:2,0:2:6.01:0,6,64	1/1:5,0:5:8.51:77,9,0	1/1:4,0:4:5.80:43,6,0	0/1:7,1:8:36.91:145,0,37	1/1:5,1:6:14.72:124,15,0	0/0:10,0:10:12.65:0,13,242	0/0:2,0:2:6.02:0,6,68	0/1:10,2:11:81.78:82,0,116	0/1:4,1:4:11.89:79,0,12	0/0:5,0:5:8.27:0,8,77	0/1:3,2:5:28.97:53,0,29	1/1:8,2:10:3.35:147,3,0	0/1:6,1:7:4.51:17,0,5	0/1:5,2:7:26.92:118,0,27	0/1:12,3:15:14.50:296,0,14	0/1:9,1:10:80.36:81,0,80	1/1:3,0:3:9.02:96,9,0
chr10	29041640	.	AAGAAAGAAAGAAAG	A	3168.78	PASS	AB=0.963;AC=22;AF=0.393;AN=56;BaseQRankSum=9.714;DP=225;FS=13.739;HRun=0;HaplotypeScore=147.9207;InbreedingCoeff=-0.2291;MQ=33.87;MQ0=4;MQRankSum=-4.299;QD=21.41;ReadPosRankSum=0.818;VQSLOD=1.6585;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:60.20:0,60,1677	0/1:5,1:6:5.94:256,0,6	0/0:7,0:2:6.02:0,6,96	0/0:7,0:2:3.01:0,3,42	0/1:8,0:8:72.55:179,0,73	0/1:11,0:11:57.78:58,0,88	0/0:6,0:5:8.72:0,9,64	0/1:11,0:8:21.53:22,0,40	0/0:16,0:16:39.13:0,39,757	0/1:12,0:12:45.82:317,0,46	1/1:6,1:7:10.19:121,10,0	0/0:2,0:2:6.02:0,6,68	0/1:5,0:5:1.67:89,0,2	1/1:3,0:3:3.48:36,3,0	0/1:8,0:8:58.55:212,0,59	0/1:5,1:6:15.46:220,0,15	0/0:9,0:9:27.09:0,27,569	0/0:2,0:2:6.02:0,6,172	0/1:11,1:11:99:195,0,128	0/1:4,1:4:20.89:184,0,21	0/1:5,0:5:0.38:0,0,60	0/1:5,0:5:37.46:103,0,37	0/1:10,0:10:22.02:270,0,22	0/0:7,0:7:5.59:0,6,34	0/1:7,0:7:46.82:174,0,47	0/1:13,1:14:39.32:595,0,39	0/1:10,0:10:99:108,0,131	1/1:3,0:3:9.03:190,9,0
chr10	29041641	.	AG	A	1538.85	PASS	AB=0.976;AC=24;AF=0.429;AN=56;BaseQRankSum=9.820;DP=216;FS=12.665;HRun=1;HaplotypeScore=102.3141;InbreedingCoeff=-0.2277;MQ=34.40;MQ0=4;MQRankSum=-5.585;QD=10.54;ReadPosRankSum=3.010;VQSLOD=0.5392;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:34.32:0,34,412	0/1:6,0:6:12.27:94,0,12	0/0:7,1:2:6.01:0,6,69	0/0:6,0:2:2.98:0,3,22	0/1:7,1:8:20.61:90,0,21	0/1:9,1:10:62.77:63,0,66	0/0:6,0:5:6.36:0,6,41	0/1:10,0:8:29:40,0,29	0/0:16,0:16:27.62:0,28,395	0/1:10,1:11:44.28:192,0,44	1/1:5,0:5:10.20:89,10,0	0/0:2,0:2:5.91:0,6,49	0/1:5,0:5:6.53:57,0,7	1/1:3,0:3:5.50:41,6,0	0/1:8,0:8:30.07:142,0,30	1/1:6,0:6:11.12:88,11,0	0/0:9,0:9:23.46:0,23,339	0/0:2,0:2:6.02:0,6,87	0/1:12,0:11:44.77:45,0,108	0/1:5,0:4:8.23:63,0,8	0/1:5,0:5:8.29:8,0,43	0/1:4,0:4:9.14:48,0,9	0/1:9,1:10:40.26:129,0,40	0/1:6,0:6:21.03:33,0,21	0/1:7,0:7:21.41:102,0,21	0/1:13,0:13:38.03:239,0,38	0/1:9,0:9:73.74:74,0,109	1/1:3,0:3:8.80:70,9,0
chr10	29041642	.	G	GA	2040.72	PASS	AB=0.900;AC=42;AF=0.750;AN=56;BaseQRankSum=7.716;DP=232;FS=10.325;HRun=3;HaplotypeScore=113.4968;InbreedingCoeff=0.5587;MQ=34.16;MQ0=4;MQRankSum=-5.630;QD=11.80;ReadPosRankSum=-2.616;VQSLOD=0.6995;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:56.01:0,56,490	1/1:5,2:7:13.57:118,14,0	0/0:6,0:2:3.01:0,3,36	0/0:4,0:1:3.01:0,3,35	1/1:5,3:8:12.69:109,13,0	1/1:7,3:10:5.23:68,5,0	0/1:7,0:5:1.07:21,0,1	1/1:10,1:9:6.10:68,6,0	0/0:16,0:16:41.06:0,41,397	1/1:8,3:11:16.47:161,16,0	1/1:5,1:6:11.93:95,12,0	1/1:3,0:3:3.01:30,3,0	1/1:4,2:6:6.64:75,7,0	1/1:3,1:4:7.55:57,8,0	1/1:4,4:8:14.98:133,15,0	1/1:5,2:7:11.98:116,12,0	0/0:10,0:10:29.83:0,30,335	0/0:2,0:2:6.02:0,6,72	1/1:11,1:10:8.38:72,8,0	1/1:5,1:5:9.70:87,10,0	1/1:6,0:6:2.70:25,3,0	1/1:5,0:5:7.02:83,7,0	1/1:7,3:10:7.57:134,8,0	1/1:6,1:7:5.34:42,5,0	1/1:6,2:8:16.26:149,16,0	1/1:10,5:15:28.40:319,28,0	0/1:9,3:12:9.35:154,0,9	1/1:2,2:4:11.60:95,12,0
chr10	29041646	.	G	GA	2350.43	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=6.294;DP=238;FS=10.203;HRun=3;HaplotypeScore=118.5318;InbreedingCoeff=0.7115;MQ=34.74;MQ0=3;MQRankSum=-5.099;QD=13.20;ReadPosRankSum=-4.753;VQSLOD=0.6889;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:52.85:0,53,454	1/1:9,1:10:15.45:130,15,0	0/0:5,0:2:3.01:0,3,36	0/0:6,0:3:6.02:0,6,71	1/1:8,1:9:12.38:110,12,0	1/1:9,0:9:8.80:59,9,0	1/1:4,2:5:6.36:51,6,0	1/1:4,2:6:12.50:133,13,0	0/0:16,0:16:41.07:0,41,408	1/1:8,2:10:9.72:170,10,0	1/1:6,2:8:11.81:101,12,0	1/1:4,1:5:7.26:68,7,0	1/1:3,2:5:8.97:78,9,0	1/1:5,2:7:10.95:94,11,0	1/1:5,3:8:14.95:124,15,0	1/1:6,1:7:9.69:119,10,0	0/0:10,0:10:25.62:0,26,266	0/0:2,0:2:6.02:0,6,72	1/1:7,1:6:3.32:56,3,0	1/1:4,2:5:5.48:86,5,0	1/1:5,1:6:3:30,3,0	1/1:5,1:6:12.02:117,12,0	1/1:11,0:11:18.54:135,19,0	1/1:6,1:7:10.16:70,10,0	1/1:8,2:10:22.21:178,22,0	1/1:10,5:15:24.60:300,25,0	1/1:9,5:14:19.16:208,19,0	1/1:2,3:5:9.97:103,10,0
chr10	29041649	.	AG	A	2660.69	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=8.728;DP=205;FS=0.699;HRun=1;HaplotypeScore=102.4550;InbreedingCoeff=0.8110;MQ=39.86;MQ0=3;MQRankSum=-4.891;QD=18.35;ReadPosRankSum=-0.876;VQSLOD=3.5521;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:28.06:0,28,374	1/1:6,3:9:23.57:181,24,0	0/0:5,0:2:6.01:0,6,71	0/0:7,0:4:8.70:0,9,95	1/1:4,4:8:19.43:153,19,0	1/1:3,3:6:11.92:107,12,0	1/1:4,0:3:8.85:56,9,0	1/1:5,0:5:14.75:103,15,0	0/0:17,0:17:30.51:0,31,436	1/1:4,4:8:21.86:205,22,0	1/1:7,0:7:5.75:98,6,0	1/1:3,0:3:8.83:55,9,0	1/1:4,1:5:8.97:85,9,0	1/1:6,0:6:17.30:109,17,0	1/1:3,2:5:15.04:166,15,0	1/1:4,3:7:20.44:149,20,0	0/0:9,0:9:18.42:0,18,266	0/0:2,0:2:6.02:0,6,87	1/1:4,2:4:8.88:72,9,0	1/1:3,1:4:11.71:92,12,0	1/1:3,0:3:5.91:41,6,0	1/1:3,2:5:14.83:116,15,0	1/1:4,5:9:17.96:180,18,0	1/1:4,2:6:8.27:47,8,0	1/1:5,3:8:21.30:176,21,0	1/1:9,5:14:38.62:334,39,0	1/1:10,2:12:22.61:198,23,0	1/1:5,0:5:14.85:115,15,0
chr10	29041650	.	G	GA	3574.84	PASS	AB=0.727;AC=43;AF=0.768;AN=56;BaseQRankSum=7.790;DP=213;FS=3.037;HRun=3;HaplotypeScore=102.1429;InbreedingCoeff=0.7385;MQ=39.88;MQ0=3;MQRankSum=-6.258;QD=23.36;ReadPosRankSum=-2.466;VQSLOD=2.4435;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:55.57:0,56,485	1/1:5,4:9:23.80:247,24,0	0/0:4,0:2:3.01:0,3,36	0/0:7,0:4:9.01:0,9,95	1/1:5,3:8:18.01:184,18,0	1/1:6,0:6:9.44:79,9,0	1/1:1,4:4:6.02:69,6,0	1/1:2,5:7:21.06:253,21,0	0/0:17,0:17:41.07:0,41,408	0/1:5,3:8:3.35:207,0,3	1/1:3,4:7:11.42:150,11,0	1/1:0,3:3:9.03:106,9,0	1/1:3,2:5:9.02:93,9,0	1/1:1,5:6:15.04:170,15,0	1/1:3,3:6:15.04:157,15,0	1/1:5,2:7:15.40:155,15,0	0/0:9,0:9:22.84:0,23,234	0/0:2,0:2:6.02:0,6,72	1/1:4,2:4:8.69:77,9,0	1/1:3,2:5:11.39:104,11,0	1/1:0,3:3:6.02:73,6,0	1/1:3,2:5:12.03:131,12,0	1/1:8,1:9:18.04:194,18,0	1/1:4,2:6:8.87:75,9,0	1/1:5,4:9:21.93:233,22,0	1/1:10,5:15:38.33:391,38,0	1/1:5,7:12:24.54:272,25,0	1/1:2,4:6:14.83:155,15,0
chr10	29041652	.	AAG	A	3024.59	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=8.255;DP=217;FS=1.504;HRun=0;HaplotypeScore=107.6014;InbreedingCoeff=0.7969;MQ=40.90;MQ0=2;MQRankSum=-5.653;QD=19.51;ReadPosRankSum=2.519;VQSLOD=3.6883;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:17.57:0,18,421	1/1:6,3:9:23.68:210,24,0	0/0:5,0:2:6.02:0,6,82	0/0:7,0:5:11.96:0,12,125	1/1:4,4:8:17.60:171,18,0	1/1:3,3:6:8.82:83,9,0	1/1:4,0:3:5.93:53,6,0	1/1:7,0:7:14.30:113,14,0	0/0:17,0:17:9.16:0,9,349	1/1:5,4:9:24.24:217,24,0	1/1:7,0:7:16.26:126,16,0	1/1:3,0:3:8.88:70,9,0	1/1:3,1:4:9.02:99,9,0	1/1:7,0:7:10.87:110,11,0	1/1:5,2:7:15.03:156,15,0	1/1:4,3:7:18.03:157,18,0	0/0:9,0:9:8.59:0,9,221	0/0:2,0:2:6.02:0,6,82	1/1:5,1:4:9.02:97,9,0	1/1:4,1:5:12.02:127,12,0	1/1:3,0:3:8.96:75,9,0	1/1:3,2:5:11.95:121,12,0	1/1:4,5:9:17.96:183,18,0	1/1:4,2:6:8.36:46,8,0	1/1:7,3:10:24.74:223,25,0	1/1:10,5:15:36.07:375,36,0	1/1:10,2:12:23.96:243,24,0	1/1:6,0:6:15.42:142,15,0
chr10	29044951	.	A	AT	15552.69	PASS	AB=1.000;AC=54;AF=0.964;AN=56;BaseQRankSum=-4.345;DP=594;FS=0.000;HRun=9;HaplotypeScore=51.7580;InbreedingCoeff=0.2849;MQ=70.77;MQ0=0;MQRankSum=-2.989;QD=26.18;ReadPosRankSum=1.976;VQSLOD=5.2578;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,42:48:91.26:1235,91,0	1/1:3,9:12:24.06:265,24,0	0/1:6,0:7:2.77:3,0,7	0/1:6,0:7:12.65:13,0,47	1/1:6,22:28:66.13:710,66,0	1/1:2,24:26:66.18:730,66,0	1/1:1,18:19:48.13:531,48,0	1/1:6,26:32:78.17:836,78,0	1/1:0,27:27:78.21:863,78,0	1/1:5,31:36:93.20:1000,93,0	1/1:2,16:18:42.59:465,43,0	1/1:2,15:18:44.95:479,45,0	1/1:2,21:23:54.15:597,54,0	1/1:2,13:15:36.10:398,36,0	1/1:3,17:20:39.11:431,39,0	1/1:2,16:18:36.10:398,36,0	1/1:0,16:16:42.11:465,42,0	1/1:0,13:13:36.10:398,36,0	1/1:5,17:22:51.09:543,51,0	1/1:1,25:26:75.16:816,75,0	1/1:1,14:15:39.11:431,39,0	1/1:2,21:23:57.12:618,57,0	1/1:1,10:11:27.07:299,27,0	1/1:3,24:27:66.18:730,66,0	1/1:0,24:24:57.15:630,57,0	1/1:3,19:22:57.15:630,57,0	1/1:3,31:34:58.55:870,59,0	1/1:1,6:7:15.04:166,15,0
chr10	29047504	.	A	ATCTCTCTC	5992.06	PASS	AB=0.897;AC=42;AF=0.778;AN=54;BaseQRankSum=0.098;DP=612;FS=6.459;HRun=0;HaplotypeScore=205.8392;InbreedingCoeff=0.2396;MQ=57.22;MQ0=12;MQRankSum=-2.339;QD=11.08;ReadPosRankSum=-3.659;VQSLOD=2.3960;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:28:8.24:0,8,632	0/1:7,0:9:0.02:0,0,0	./.	0/0:23,0:17:2.14:0,2,57	1/1:26,13:40:2.76:34,3,0	0/1:25,0:25:77.05:77,0,90	0/1:22,0:22:54.95:55,0,89	1/1:32,0:32:14.84:214,15,0	1/1:24,0:24:19.47:527,19,0	1/1:26,0:31:40.95:1032,41,0	1/1:22,0:21:11.95:236,12,0	0/1:26,0:27:73.89:159,0,74	1/1:10,0:10:6.01:96,6,0	0/1:19,0:18:0:0,0,0	1/1:13,8:22:0.46:1,0,0	1/1:12,0:12:3.01:72,3,0	1/1:12,0:12:12.04:362,12,0	1/1:3,6:10:3.01:77,3,0	1/1:25,0:24:32.29:586,32,0	1/1:22,0:21:8.87:133,9,0	0/1:12,0:13:0:0,0,0	0/1:19,0:19:38.32:38,0,80	0/1:10,0:23:0:0,0,0	1/1:31,0:29:20.85:449,21,0	1/1:18,0:17:12.04:315,12,0	1/1:16,12:26:53.47:998,53,0	1/1:22,0:21:12.04:312,12,0	1/1:17,0:15:9.03:220,9,0
chr10	29047506	.	C	CTCTC	4564.80	PASS	AB=0.960;AC=44;AF=0.815;AN=54;BaseQRankSum=3.969;DP=615;FS=2.674;HRun=0;HaplotypeScore=172.6702;InbreedingCoeff=0.2332;MQ=56.52;MQ0=12;MQRankSum=-2.327;QD=7.91;ReadPosRankSum=-1.880;VQSLOD=3.4729;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:30:30.66:31,0,349	0/1:11,0:10:0:0,0,0	./.	0/0:22,0:16:2.34:0,2,46	1/1:38,0:38:3.01:34,3,0	1/1:26,0:26:19.89:348,20,0	0/1:22,0:22:16.77:317,0,17	1/1:31,0:31:7.62:58,8,0	1/1:23,0:23:19.21:277,19,0	1/1:31,0:30:40.95:570,41,0	1/1:22,0:21:12.04:193,12,0	1/1:28,0:28:21.78:261,22,0	1/1:10,0:10:5.95:77,6,0	0/1:10,8:18:0:0,0,0	0/1:22,0:21:0:1,0,0	1/1:13,0:13:3.28:36,3,0	1/1:12,0:12:12.04:190,12,0	1/1:10,0:10:3.01:39,3,0	1/1:26,0:25:30.51:370,31,0	1/1:22,0:21:9.02:111,9,0	0/1:18,0:15:0:0,0,0	0/1:20,0:20:26.75:251,0,27	0/1:23,0:23:0:0,0,0	1/1:31,0:29:20.94:307,21,0	1/1:19,0:18:12.04:196,12,0	1/1:28,0:26:50.21:603,50,0	1/1:22,0:21:12.04:167,12,0	1/1:17,0:15:9.03:130,9,0
chr10	29047538	.	C	CTGTGTGTGTG	96.72	PASS	AB=1.000;AC=8;AF=0.160;AN=50;BaseQRankSum=1.194;DP=568;FS=26.313;HRun=0;HaplotypeScore=209.9348;InbreedingCoeff=-0.0395;MQ=46.33;MQ0=17;MQRankSum=-2.010;QD=0.56;ReadPosRankSum=-2.135;VQSLOD=1.0078;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/0:5,0:4:3.01:0,3,50	./.	./.	0/1:31,0:31:49.11:49,0,207	0/1:31,0:31:54.11:54,0,277	0/0:25,0:25:4.85:0,5,72	1/1:14,0:13:5.99:62,6,0	0/0:19,0:19:9:0,9,98	0/1:24,0:23:13.07:13,0,293	0/0:16,0:15:6.15:0,6,106	0/0:26,0:25:28.17:0,28,480	0/0:8,0:8:15.10:0,15,234	0/0:21,0:20:0.07:0,0,359	0/0:21,0:20:17.77:0,18,281	0/0:17,0:16:24.54:0,25,473	0/0:14,0:14:14.44:0,14,430	0/0:12,0:12:13.20:0,13,260	0/1:25,0:24:10.42:10,0,274	0/1:24,0:23:8.92:9,0,303	0/0:21,0:18:6.02:0,6,132	0/1:25,0:25:23.40:23,0,208	0/0:19,0:19:2.92:0,3,48	0/0:30,0:27:19.53:0,20,206	0/0:17,0:16:11.72:0,12,239	0/0:29,0:27:14.98:0,15,352	0/0:25,0:24:32.96:0,33,725	0/0:13,0:11:11.87:0,12,249
chr10	29047648	.	A	AT	14045.13	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-12.561;DP=629;FS=6.536;HRun=8;HaplotypeScore=61.1998;InbreedingCoeff=0.9995;MQ=83.41;MQ0=0;MQRankSum=-3.036;QD=28.96;ReadPosRankSum=1.729;VQSLOD=5.2701;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:45:99:0,122,1104	1/1:1,9:11:29.92:326,30,0	0/0:17,0:18:48.02:0,48,437	0/0:22,0:22:48.86:0,49,429	1/1:2,24:26:69.08:752,69,0	1/1:3,23:26:69.20:796,69,0	1/1:2,21:23:51.15:588,51,0	1/1:6,26:32:75.20:847,75,0	0/0:14,0:14:42:0,42,379	1/1:4,30:34:90.24:1013,90,0	1/1:0,28:29:84.04:934,84,0	1/1:3,17:20:45.13:519,45,0	1/1:1,13:14:39.12:450,39,0	1/1:0,18:17:41.91:484,42,0	1/1:3,22:24:63.19:727,63,0	1/1:1,11:12:33.10:381,33,0	0/0:31,0:31:84.04:0,84,769	0/0:12,0:12:36.02:0,36,329	1/1:2,21:23:63.17:717,63,0	1/1:2,18:21:51.15:589,51,0	1/1:4,23:27:35.72:665,36,0	1/1:0,16:16:42.08:469,42,0	1/1:3,24:27:66.19:762,66,0	1/1:1,19:20:54.16:623,54,0	1/1:2,14:16:30.09:346,30,0	1/1:2,27:29:81.24:934,81,0	1/1:0,24:25:69.04:776,69,0	1/1:1,9:10:30.09:346,30,0
chr10	29048731	.	CCTGTCAGCCTGCGCTTCTTT	C	21802.28	PASS	AB=0.545;AC=43;AF=0.768;AN=56;BaseQRankSum=14.080;DP=446;FS=78.513;HRun=0;HaplotypeScore=188.9109;InbreedingCoeff=0.7327;MQ=43.43;MQ0=65;MQRankSum=-12.844;QD=93.98;ReadPosRankSum=0.595;VQSLOD=1.2900;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:46:99:0,111,9572	1/1:0,1:1:3.01:174,3,0	0/0:37,0:2:6.02:0,6,115	0/0:42,0:5:15.05:0,15,590	1/1:1,7:7:11.49:214,11,0	1/1:0,14:14:29.89:1580,30,0	0/1:2,10:12:84.62:1024,0,85	1/1:0,25:24:71.04:2117,71,0	0/0:30,0:30:90.31:0,90,7580	1/1:0,8:8:18.06:933,18,0	1/1:0,6:6:8.86:362,9,0	1/1:0,11:11:30.10:1741,30,0	1/1:0,6:6:15.05:870,15,0	1/1:1,16:17:36.12:1978,36,0	1/1:0,13:13:30.10:1618,30,0	1/1:0,14:14:30.10:1706,30,0	0/0:31,0:30:78.27:0,78,6901	0/0:27,0:27:71.91:0,72,5803	1/1:3,5:5:11.94:387,12,0	1/1:0,13:13:38.39:1549,38,0	1/1:0,19:19:11.34:56,11,0	1/1:0,4:3:2.80:13,3,0	1/1:0,10:10:26.83:1166,27,0	1/1:0,6:6:5.93:68,6,0	1/1:1,7:8:21.07:1216,21,0	1/1:0,17:17:50.38:2332,50,0	1/1:0,9:9:6.02:348,6,0	1/1:0,3:3:6.02:348,6,0
chr10	29049257	.	T	TG	2689.89	PASS	AB=0.536;AC=33;AF=0.717;AN=46;BaseQRankSum=0.734;DP=516;FS=0.000;HRun=0;HaplotypeScore=22.3092;InbreedingCoeff=0.7107;MQ=34.88;MQ0=77;MQRankSum=-7.848;QD=9.47;ReadPosRankSum=-0.360;VQSLOD=2.8768;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:41:24.07:0,24,335	./.	0/0:16,0:3:9.03:0,9,125	0/0:24,0:5:9.03:0,9,126	1/1:7,16:13:33:481,33,0	1/1:11,15:10:8.94:110,9,0	./.	./.	0/0:26,0:24:30.54:0,31,399	1/1:7,11:7:15.01:207,15,0	1/1:9,7:8:12.04:166,12,0	1/1:4,11:10:9.03:140,9,0	1/1:7,8:6:6.02:93,6,0	1/1:9,11:8:9.03:140,9,0	1/1:3,14:9:11.84:100,12,0	0/1:2,13:6:29.91:128,0,30	0/0:39,0:32:24.08:0,24,335	0/0:36,0:26:36.08:0,36,480	1/1:3,5:2:5.99:68,6,0	1/1:7,7:5:3.01:47,3,0	./.	1/1:12,11:11:14.96:191,15,0	1/1:5,5:2:5.91:51,6,0	./.	1/1:2,7:6:8.96:101,9,0	1/1:10,14:8:15.05:234,15,0	1/1:4,17:11:30.10:457,30,0	1/1:3,7:8:14.86:148,15,0
chr10	29050830	.	G	GA	14608.58	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-1.951;DP=598;FS=9.015;HRun=9;HaplotypeScore=82.1821;InbreedingCoeff=0.9985;MQ=78.19;MQ0=0;MQRankSum=-4.393;QD=26.56;ReadPosRankSum=2.738;VQSLOD=4.8651;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:47.94:0,48,411	1/1:0,10:10:30.04:318,30,0	0/0:11,0:11:23.99:0,24,206	0/0:18,0:17:34.55:0,35,290	1/1:7,26:33:69:694,69,0	1/1:3,16:19:48.13:531,48,0	1/1:2,10:13:29.91:313,30,0	1/1:4,38:43:99:1209,111,0	1/1:3,18:21:48.13:531,48,0	1/1:6,18:24:54.13:589,54,0	1/1:5,14:19:45.59:498,46,0	1/1:1,15:16:39.11:431,39,0	1/1:1,19:21:56.99:611,57,0	1/1:0,15:15:33.09:365,33,0	1/1:1,24:25:60.16:664,60,0	1/1:3,22:25:63.17:697,63,0	1/1:2,18:20:51.14:564,51,0	1/1:1,14:18:44.62:441,45,0	1/1:4,20:24:37.05:607,37,0	1/1:6,23:29:69.15:750,69,0	1/1:0,15:15:42.11:465,42,0	1/1:1,14:15:36.10:398,36,0	1/1:5,38:43:99:1195,108,0	1/1:2,13:17:38.77:393,39,0	1/1:2,12:14:36.10:398,36,0	1/1:6,20:27:63.14:671,63,0	1/1:1,29:29:81.22:896,81,0	1/1:0,13:14:35.93:379,36,0
chr10	29051146	.	C	CTATCTATC	8407.25	PASS	AB=1.000;AC=47;AF=0.904;AN=52;BaseQRankSum=-3.531;DP=662;FS=0.000;HRun=0;HaplotypeScore=225.5305;InbreedingCoeff=0.1197;MQ=55.27;MQ0=3;MQRankSum=-2.309;QD=13.32;ReadPosRankSum=-0.046;VQSLOD=3.2372;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:29:10.53:86,11,0	1/1:4,0:4:3.01:65,3,0	./.	./.	0/1:34,0:34:36.86:37,0,123	1/1:18,0:18:18.05:256,18,0	0/1:5,0:5:0:0,0,0	1/1:54,0:54:59.63:458,60,0	1/1:15,0:15:6.02:80,6,0	1/1:24,0:23:15.05:320,15,0	0/1:30,0:30:0.32:0,0,0	1/1:13,5:19:15.04:404,15,0	1/1:30,0:30:27.07:376,27,0	1/1:28,0:28:27.08:534,27,0	1/1:20,0:20:27.08:457,27,0	1/1:32,0:32:38.98:621,39,0	1/1:14,0:14:24.06:399,24,0	0/1:18,0:18:99:105,0,104	1/1:27,0:24:26.99:471,27,0	0/1:34,0:34:99:309,0,102	1/1:30,0:30:24.05:353,24,0	1/1:23,0:23:12.02:190,12,0	1/1:31,0:31:24.05:508,24,0	1/1:13,0:13:9.01:117,9,0	1/1:27,0:27:27.06:479,27,0	1/1:28,0:28:33.05:671,33,0	1/1:30,0:30:30.03:760,30,0	1/1:13,0:13:24.05:352,24,0
chr10	29051177	.	T	TCTATCTAC	5394.66	PASS	AB=1.000;AC=27;AF=0.482;AN=56;BaseQRankSum=-6.477;DP=679;FS=10.772;HRun=0;HaplotypeScore=271.2788;InbreedingCoeff=-0.5180;MQ=52.77;MQ0=7;MQRankSum=-6.290;QD=8.66;ReadPosRankSum=-1.035;VQSLOD=1.4828;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:39,0:38:74.27:537,74,0	0/1:6,0:6:25.44:25,0,84	0/0:11,0:9:21.02:0,21,216	0/0:12,0:9:27.03:0,27,257	0/1:34,0:36:99:128,0,465	0/1:18,0:18:99:110,0,156	0/0:11,0:11:23.81:0,24,196	0/1:52,0:50:99:357,0,226	1/1:1,14:16:6.02:113,6,0	0/1:28,0:27:99:148,0,455	0/0:22,0:22:26.38:0,26,223	0/1:27,0:27:99:276,0,279	0/1:30,0:30:99:126,0,304	0/1:27,0:27:99:295,0,227	0/1:23,0:23:99:212,0,240	0/1:29,0:29:99:329,0,194	1/1:20,0:20:47.27:387,47,0	0/1:16,0:16:97.27:231,0,97	0/1:22,0:20:97.94:206,0,98	0/1:37,0:37:98.61:99,0,660	0/1:26,0:26:99:152,0,257	0/1:22,0:22:69.73:70,0,119	0/1:37,0:37:99:309,0,275	0/1:15,0:15:56.37:56,0,133	0/1:30,0:30:99:226,0,286	0/1:24,0:24:99:341,0,239	0/1:29,0:29:99:471,0,271	0/1:14,0:14:38.99:189,0,39
chr10	29051976	.	CA	C	566.02	PASS	AB=0.848;AC=18;AF=0.321;AN=56;BaseQRankSum=1.763;DP=597;FS=0.474;HRun=17;HaplotypeScore=104.1348;InbreedingCoeff=0.0289;MQ=53.47;MQ0=21;MQRankSum=2.203;QD=1.70;ReadPosRankSum=1.491;VQSLOD=-0.5158;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:44,1:46:47.36:0,47,392	0/0:6,0:8:17.85:0,18,128	0/0:18,0:10:17.77:0,18,117	0/0:13,0:4:4.50:0,4,16	1/1:16,17:36:20.63:203,21,0	0/0:16,1:20:9.69:0,10,141	0/1:14,1:13:14.37:14,0,50	0/1:22,5:28:16.39:16,0,153	0/0:18,1:20:23.58:0,24,167	0/0:24,1:25:32.29:0,32,225	0/0:16,3:22:10.66:0,11,144	0/1:15,3:19:36.37:36,0,118	0/0:17,1:19:7.83:0,8,206	0/1:13,3:16:13.89:14,0,134	0/1:22,2:24:29.25:29,0,147	0/1:13,4:18:19.27:19,0,124	0/1:34,1:37:21.07:21,0,248	0/0:17,1:18:9.69:0,10,142	0/1:13,3:17:0.80:42,0,1	0/1:14,11:26:10.02:111,0,10	1/1:3,1:5:4.61:22,5,0	0/1:15,0:17:3.49:3,0,101	0/1:17,6:22:51.48:51,0,91	0/0:16,1:15:20.85:0,21,156	0/0:15,0:16:20.08:0,20,173	0/1:19,4:24:26.07:26,0,197	1/1:7,9:18:23.53:125,24,0	0/0:10,0:8:11.97:0,12,96
chr10	29052473	.	ACACT	A	2751.49	PASS	AB=0.968;AC=20;AF=0.357;AN=56;BaseQRankSum=-7.715;DP=811;FS=7.771;HRun=0;HaplotypeScore=216.4927;InbreedingCoeff=0.3937;MQ=68.74;MQ0=19;MQRankSum=-3.006;QD=8.68;ReadPosRankSum=-6.624;VQSLOD=0.1284;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:41:88.45:0,88,593	0/1:16,0:16:4.17:4,0,13	0/0:71,0:32:73.75:0,74,1443	0/0:108,0:52:83.80:0,84,1708	0/0:21,0:21:9.11:0,9,34	0/1:15,2:17:7.11:48,0,7	0/1:30,2:32:13.42:42,0,13	1/1:36,0:35:8.01:153,8,0	1/1:5,18:23:51.09:792,51,0	0/1:29,0:30:25.14:75,0,25	0/0:23,0:23:21.18:0,21,53	0/0:28,0:28:14.95:0,15,37	0/1:27,1:28:28.74:32,0,29	0/1:15,1:15:14.13:43,0,14	0/0:26,0:25:17.91:0,18,45	0/0:18,0:18:12.93:0,13,32	1/1:8,12:20:42.04:654,42,0	1/1:7,11:18:42.01:624,42,0	1/1:23,2:25:20.88:302,21,0	0/0:25,1:26:22.43:0,22,56	0/0:41,0:41:27.40:0,27,69	0/0:24,0:24:19.87:0,20,49	0/0:19,0:19:12.46:0,12,31	0/0:29,0:28:20.53:0,21,52	0/0:18,0:18:16.20:0,16,40	0/1:28,0:28:6.79:105,0,7	0/1:15,0:15:3.55:37,0,4	1/1:13,0:13:1.60:24,2,0
chr10	29052475	.	ACT	A	16503.29	PASS	AB=1.000;AC=51;AF=0.911;AN=56;BaseQRankSum=4.088;DP=806;FS=2.940;HRun=0;HaplotypeScore=146.6560;InbreedingCoeff=0.8349;MQ=68.53;MQ0=19;MQRankSum=3.471;QD=26.49;ReadPosRankSum=8.648;VQSLOD=5.2177;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:42,0:41:3.36:345,0,3	1/1:1,14:15:30.10:447,30,0	0/0:73,1:33:79.66:0,80,1221	0/0:108,0:52:78.32:0,78,1323	1/1:1,19:20:38.94:589,39,0	1/1:2,16:18:24.04:341,24,0	1/1:4,26:30:30.06:432,30,0	1/1:1,35:36:96.20:1260,96,0	1/1:24,0:24:53.61:391,54,0	1/1:1,28:30:80.22:1073,80,0	1/1:0,24:24:54.18:823,54,0	1/1:1,25:26:39.13:596,39,0	1/1:1,27:28:54.14:798,54,0	1/1:1,15:15:33.07:478,33,0	1/1:0,26:25:45.15:687,45,0	1/1:0,17:17:33.11:504,33,0	1/1:19,0:19:37.35:248,37,0	1/1:18,0:18:41.61:292,42,0	1/1:2,22:24:72.05:893,72,0	1/1:1,25:26:53.99:825,54,0	1/1:1,39:40:72.23:1078,72,0	1/1:0,24:24:57.19:871,57,0	1/1:0,19:19:29.95:458,30,0	1/1:1,27:27:54.18:816,54,0	1/1:0,18:18:39.13:596,39,0	1/1:0,28:28:81.10:1055,81,0	1/1:0,14:14:24.08:364,24,0	1/1:0,13:13:18.01:247,18,0
chr10	29052477	.	TCA	T	7820.99	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=5.877;DP=814;FS=3.461;HRun=0;HaplotypeScore=179.0306;InbreedingCoeff=0.9541;MQ=68.28;MQ0=20;MQRankSum=5.077;QD=12.55;ReadPosRankSum=11.395;VQSLOD=2.9349;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,38:41:78.24:1025,78,0	1/1:14,0:14:29.74:209,30,0	0/0:77,0:36:90.06:0,90,1302	0/0:114,0:54:99:0,103,1409	1/1:20,0:20:38.56:283,39,0	1/1:18,0:18:23.54:164,24,0	1/1:29,0:29:29.50:207,29,0	1/1:35,0:34:65.38:504,65,0	1/1:25,0:25:30.69:121,31,0	1/1:30,0:30:34.55:344,35,0	1/1:26,0:26:9.72:338,10,0	1/1:25,0:25:38.67:269,39,0	1/1:28,0:28:53.23:373,53,0	1/1:16,0:15:32.49:232,32,0	1/1:26,0:25:44.67:319,45,0	1/1:17,0:17:32.73:228,33,0	1/1:18,0:18:15.25:86,15,0	1/1:18,0:18:27.39:123,27,0	1/1:24,0:24:49.68:316,50,0	1/1:27,0:27:31.44:352,31,0	1/1:42,0:42:24.03:434,24,0	1/1:24,0:24:56.54:396,57,0	1/1:19,0:19:29.61:208,30,0	1/1:27,0:26:53.55:377,54,0	1/1:18,0:18:38.68:274,39,0	1/1:28,0:28:57.16:349,57,0	1/1:14,0:14:23.84:173,24,0	1/1:13,0:13:14.95:119,15,0
chr10	29052508	.	C	CAG	1552.43	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=0.616;DP=749;FS=2.471;HRun=0;HaplotypeScore=198.8089;InbreedingCoeff=0.8406;MQ=70.09;MQ0=6;MQRankSum=-3.315;QD=18.48;ReadPosRankSum=-3.679;VQSLOD=2.9907;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:55.03:0,55,488	0/0:9,0:9:16.16:0,16,123	0/0:38,0:25:27.79:0,28,634	0/0:91,0:49:42.52:0,43,1057	0/0:15,0:15:5.36:0,5,175	0/0:20,0:20:36.03:0,36,258	0/0:19,0:19:26.43:0,26,177	0/0:45,0:44:38.85:0,39,408	1/1:3,19:22:51.14:819,51,0	0/1:23,0:23:2.47:2,0,244	0/0:26,0:26:31.71:0,32,369	0/0:24,0:24:33.06:0,33,230	0/0:35,0:35:59.74:0,60,476	0/0:17,0:17:34.17:0,34,240	0/0:24,0:24:50.68:0,51,339	0/0:22,0:22:48.18:0,48,327	1/1:9,11:20:23.83:359,24,0	1/1:6,13:19:35.99:514,36,0	0/0:24,0:24:53.06:0,53,351	0/0:24,0:24:28.17:0,28,341	0/0:39,0:39:53.46:0,53,379	0/0:29,0:29:59.45:0,59,418	0/0:19,0:19:11.64:0,12,211	0/0:21,0:21:47.17:0,47,343	0/0:24,0:24:41.57:0,42,290	0/0:28,0:28:34.01:0,34,345	0/0:19,0:19:34.45:0,34,260	0/0:14,0:14:20.89:0,21,159
chr10	29053974	.	A	AAAAAAAAG	2115.34	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=2.512;DP=643;FS=5.667;HRun=0;HaplotypeScore=177.9669;InbreedingCoeff=0.8119;MQ=67.57;MQ0=9;MQRankSum=-6.536;QD=32.05;ReadPosRankSum=-2.296;VQSLOD=2.5243;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:34.24:0,34,678	0/0:9,0:9:26.99:0,27,480	0/0:49,0:15:15.83:0,16,165	0/0:51,0:18:6.27:0,6,125	0/0:38,0:37:99:0,102,1664	0/0:22,0:22:56.51:0,57,898	0/0:11,0:11:33.07:0,33,557	0/0:29,0:29:47.85:0,48,687	1/1:12,2:14:28.90:583,29,0	0/0:31,0:31:51.26:0,51,1083	0/0:33,0:33:46.01:0,46,1170	0/0:16,0:16:35.81:0,36,528	0/0:15,0:15:33.13:0,33,404	0/0:23,0:23:47.60:0,48,619	0/0:17,0:17:46.34:0,46,942	0/0:16,0:16:39.79:0,40,846	1/1:23,3:25:65.67:1228,66,0	1/1:14,0:15:35.65:440,36,0	0/0:31,0:31:46.74:0,47,866	0/0:32,0:32:54.49:0,54,1092	0/0:11,0:11:25.17:0,25,452	0/0:21,0:21:59.90:0,60,930	0/0:17,0:17:46.38:0,46,772	0/0:8,0:8:24.02:0,24,403	0/0:14,0:14:42.07:0,42,698	0/0:33,0:33:81.13:0,81,1286	0/0:25,0:25:71.61:0,72,1107	0/1:10,0:10:12.55:13,0,257
chr10	29054031	.	TA	T	518.38	PASS	AB=0.875;AC=14;AF=0.250;AN=56;BaseQRankSum=4.715;DP=552;FS=0.000;HRun=16;HaplotypeScore=82.0827;InbreedingCoeff=0.0835;MQ=73.32;MQ0=0;MQRankSum=-1.029;QD=2.18;ReadPosRankSum=2.113;VQSLOD=-0.7388;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:9,6:16:22.31:90,0,22	0/1:12,2:15:9.22:9,0,137	0/0:20,0:15:8.71:0,9,51	0/0:9,0:7:7.17:0,7,51	0/1:26,2:28:8.92:9,0,141	0/1:19,2:24:2.42:2,0,226	0/0:8,0:9:3.76:0,4,123	0/0:23,1:30:2.85:0,3,178	1/1:7,16:23:34.94:215,35,0	0/1:34,2:36:1.60:2,0,283	0/0:29,1:31:3.80:0,4,304	0/1:14,1:15:6.04:6,0,161	0/1:14,1:16:17.09:17,0,156	0/0:19,1:19:16.51:0,17,204	0/0:15,2:17:11.94:0,12,207	0/0:21,2:25:19.98:0,20,352	0/1:9,12:23:0.18:180,0,0	1/1:6,8:16:21.43:119,21,0	0/1:12,0:13:9.10:9,0,137	0/0:26,0:30:34.38:0,34,318	0/0:9,0:9:20.75:0,21,158	0/0:21,1:25:0.35:0,0,213	0/1:10,2:13:9.22:9,0,135	0/0:15,1:17:20.24:0,20,244	0/0:15,0:15:22.63:0,23,238	0/0:18,1:19:5.95:0,6,154	0/0:28,0:28:53.65:0,54,410	0/0:7,0:9:23.64:0,24,172
chr10	29057383	.	C	CTA	2422.01	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-2.989;DP=550;FS=10.900;HRun=0;HaplotypeScore=100.1693;InbreedingCoeff=0.9972;MQ=78.19;MQ0=0;MQRankSum=-0.191;QD=49.43;ReadPosRankSum=2.666;VQSLOD=3.9930;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:96.32:0,96,1413	0/0:10,0:10:23.54:0,24,350	0/0:21,0:21:50.81:0,51,660	0/0:12,0:12:29.64:0,30,384	0/0:20,0:20:51.16:0,51,729	0/0:20,0:20:57.18:0,57,820	0/0:28,0:28:81.27:0,81,1187	0/0:24,0:24:69.23:0,69,1013	1/1:2,13:15:42.61:769,43,0	0/0:22,0:22:60.20:0,60,883	0/0:14,0:14:33.10:0,33,466	0/0:21,0:21:60.20:0,60,876	0/0:24,0:24:68.74:0,69,1015	0/0:28,0:28:81.14:0,81,1183	0/0:28,0:28:69.09:0,69,1015	0/0:21,0:21:60.20:0,60,877	1/1:2,17:19:51.17:955,51,0	1/1:2,13:15:45.15:841,45,0	0/0:18,0:18:51.14:0,51,729	0/0:20,0:20:60.19:0,60,859	0/0:24,0:24:63.21:0,63,928	0/0:17,0:17:48.15:0,48,687	0/0:20,0:20:54.18:0,54,795	0/0:18,0:18:45.15:0,45,662	0/0:13,0:13:39.13:0,39,574	0/0:27,0:27:72.23:0,72,1042	0/0:10,0:10:30.10:0,30,442	0/0:7,0:7:21.07:0,21,309
chr10	29057756	.	CTGTTAGAGTCTG	C	49.11	PASS	AB=1.000;AC=3;AF=0.50;AN=6;BaseQRankSum=-1.659;DP=60;FS=4.242;HRun=0;HaplotypeScore=131.3490;MQ=129.77;MQ0=10;MQRankSum=-1.042;QD=1.40;ReadPosRankSum=1.196;VQSLOD=2.4985;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:18,0:8:17.19:0,17,317	0/1:22,0:10:8.55:9,0,259	./.	./.	./.	./.	./.	1/1:0,13:13:16.13:114,16,0	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.
chr10	29057824	.	T	TGCGCGCGCGC	130.25	PASS	AB=0.600;AC=5;AF=0.093;AN=54;BaseQRankSum=0.998;DP=439;FS=1.459;HRun=0;HaplotypeScore=194.7853;InbreedingCoeff=0.6712;MQ=55.92;MQ0=4;MQRankSum=-3.126;QD=5.01;ReadPosRankSum=-0.012;VQSLOD=2.7906;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:17:5.86:107,6,0	0/0:11,0:11:18.26:0,18,470	0/0:11,0:8:6.43:0,6,56	0/0:13,0:4:4.15:0,4,49	0/0:13,0:13:30.05:0,30,710	0/0:23,0:23:45.58:0,46,1115	0/0:27,0:27:68.75:0,69,1209	0/0:19,0:18:36.02:0,36,479	./.	0/0:20,0:20:45:0,45,854	0/0:14,0:14:27.09:0,27,853	0/0:16,0:15:26.64:0,27,601	0/0:17,0:17:39.12:0,39,905	0/0:21,0:21:33.11:0,33,858	0/0:17,0:17:29.66:0,30,750	0/0:10,0:10:15.05:0,15,458	0/1:2,3:6:0:0,0,0	1/1:3,0:3:8.89:124,9,0	0/0:20,0:20:53.53:0,54,886	0/0:14,0:14:36.05:0,36,767	0/0:28,0:28:67.66:0,68,1923	0/0:23,0:23:30.09:0,30,801	0/0:12,0:12:12.04:0,12,325	0/0:22,0:22:44.49:0,44,941	0/0:21,0:21:54.56:0,55,1063	0/0:28,0:28:80.98:0,81,1584	0/0:7,0:7:9.03:0,9,280	0/0:1,0:1:3.01:0,3,97
chr10	29057828	.	T	TGTGCGCGC	312.31	PASS	AB=1.000;AC=7;AF=0.130;AN=54;BaseQRankSum=1.731;DP=459;FS=3.939;HRun=0;HaplotypeScore=185.4189;InbreedingCoeff=0.3898;MQ=53.42;MQ0=4;MQRankSum=-0.786;QD=5.21;ReadPosRankSum=-1.974;VQSLOD=2.1259;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,14:29:5.57:269,6,0	0/1:11,0:11:5.25:5,0,324	0/1:7,0:5:7.26:7,0,35	0/1:9,0:3:5.06:5,0,27	0/0:16,0:16:29.18:0,29,482	0/0:25,0:25:50.10:0,50,721	0/0:29,0:29:50.22:0,50,621	0/0:19,0:18:33.77:0,34,237	./.	0/0:21,0:21:34.26:0,34,467	0/0:15,0:15:27.09:0,27,579	0/0:16,0:15:15.77:0,16,419	0/0:19,0:19:44.57:0,45,618	0/0:21,0:21:30.91:0,31,515	0/0:16,0:16:30.01:0,30,591	0/0:10,0:10:15.05:0,15,297	0/0:4,0:4:2.74:0,3,12	1/1:3,0:3:6.02:139,6,0	0/0:21,0:21:54.89:0,55,548	0/0:15,0:16:38.43:0,38,572	0/0:27,0:27:48.90:0,49,1221	0/0:27,0:27:33.02:0,33,564	0/0:13,0:13:11.83:0,12,252	0/0:24,0:24:47.21:0,47,713	0/0:23,0:23:46.69:0,47,617	0/0:27,0:27:70.53:0,71,973	0/0:5,0:5:9.03:0,9,188	0/0:1,0:1:3.01:0,3,67
chr10	29059863	.	A	AACACACACAC	12289.81	PASS	AB=0.942;AC=50;AF=0.893;AN=56;BaseQRankSum=-8.689;DP=677;FS=6.164;HRun=0;HaplotypeScore=239.3403;InbreedingCoeff=-0.1538;MQ=62.67;MQ0=6;MQRankSum=-3.896;QD=18.15;ReadPosRankSum=1.564;VQSLOD=2.8908;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:31,0:30:19.47:267,19,0	1/1:5,0:5:5.85:72,6,0	0/1:31,0:23:49.38:49,0,112	0/1:25,0:17:14.21:14,0,79	1/1:19,2:21:16.16:539,16,0	1/1:10,10:22:3.05:206,3,0	1/1:28,0:28:35.62:622,36,0	1/1:29,0:28:30.44:359,30,0	0/1:26,0:27:99:121,0,380	1/1:25,4:30:66.17:1714,66,0	1/1:12,1:14:15.03:298,15,0	1/1:7,6:16:3.01:150,3,0	1/1:15,1:16:23.31:578,23,0	1/1:10,8:22:10.54:450,11,0	1/1:15,13:29:13.73:746,14,0	1/1:10,5:15:14.76:579,15,0	0/1:30,0:31:99:170,0,795	0/1:27,0:27:98.90:99,0,764	1/1:10,11:23:51.02:982,51,0	1/1:13,13:29:1.70:147,2,0	1/1:33,1:32:13.61:179,14,0	1/1:11,15:28:2.60:149,3,0	0/1:19,0:31:0.18:103,0,0	1/1:13,13:32:7.18:416,7,0	1/1:8,11:20:9.02:449,9,0	1/1:29,1:31:75.31:1583,75,0	1/1:18,1:20:39.08:948,39,0	1/1:1,4:6:6.02:300,6,0
chr10	29059884	.	ACG	A	7239.13	PASS	AB=1.000;AC=52;AF=0.929;AN=56;BaseQRankSum=-4.747;DP=689;FS=3.335;HRun=0;HaplotypeScore=166.5234;InbreedingCoeff=0.2575;MQ=48.55;MQ0=9;MQRankSum=1.742;QD=11.02;ReadPosRankSum=-1.451;VQSLOD=4.6599;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:32,1:32:9.95:149,10,0	1/1:5,1:6:6.67:52,7,0	0/1:21,0:10:34.95:35,0,150	0/0:32,0:12:20.48:0,20,159	1/1:24,2:26:34.24:254,34,0	1/1:18,0:18:14.49:102,14,0	1/1:24,2:26:35.74:328,36,0	1/1:32,0:31:73.56:526,74,0	1/1:2,24:26:41.88:598,42,0	1/1:27,4:31:57.17:611,57,0	1/1:18,3:21:25.96:218,26,0	1/1:19,1:20:21.93:163,22,0	1/1:18,0:18:15.99:193,16,0	1/1:23,0:23:2.15:139,2,0	1/1:20,2:22:0.78:36,1,0	1/1:21,1:21:9.43:188,9,0	1/1:2,39:41:55.67:903,56,0	1/1:3,21:24:49.98:861,50,0	1/1:22,1:22:40.40:315,40,0	1/1:23,0:23:9.73:72,10,0	1/1:42,2:41:48.13:380,48,0	1/1:24,0:23:11.89:90,12,0	0/1:19,0:19:20.03:81,0,20	1/1:30,0:29:17.74:147,18,0	1/1:17,0:17:14.87:112,15,0	1/1:34,3:35:41.45:477,41,0	1/1:21,1:22:20.69:166,21,0	1/1:8,0:8:1.11:42,1,0
chr10	29060746	.	ATTGT	A	3587.84	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=11.101;DP=746;FS=3.630;HRun=0;HaplotypeScore=118.8751;InbreedingCoeff=0.9984;MQ=90.02;MQ0=0;MQRankSum=-2.309;QD=42.21;ReadPosRankSum=2.895;VQSLOD=4.1983;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,106,2738	0/0:14,0:14:39.13:0,39,1028	0/0:30,0:29:78.16:0,78,1804	0/0:29,0:29:84.20:0,84,2072	0/0:25,0:25:72.25:0,72,1894	0/0:26,0:26:75.26:0,75,1977	0/0:13,0:13:36.11:0,36,896	0/0:33,0:33:84.29:0,84,2178	1/1:2,33:35:75.26:1380,75,0	0/0:35,0:35:99:0,102,2572	0/0:17,0:17:51.18:0,51,1347	0/0:23,0:23:66.22:0,66,1698	0/0:20,0:20:60.21:0,60,1585	0/0:47,0:47:99:0,132,3439	0/0:23,0:23:69.19:0,69,1710	0/0:36,0:36:99:0,105,2741	1/1:2,26:28:63.22:1159,63,0	1/1:1,21:22:57.20:1049,57,0	0/0:19,0:19:51.18:0,51,1318	0/0:35,0:35:99:0,99,2461	0/0:40,0:40:99:0,108,2669	0/0:31,0:31:87.30:0,87,2257	0/0:24,0:24:57.20:0,57,1503	0/0:27,0:27:81.28:0,81,2117	0/0:13,0:13:36.12:0,36,951	0/0:26,0:26:78.27:0,78,1988	0/0:29,0:29:81.28:0,81,2133	0/0:7,0:7:21.07:0,21,530
chr10	29061739	.	T	TTGAGTTCAGCA	5866.44	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-1.563;DP=609;FS=18.977;HRun=0;HaplotypeScore=190.3671;InbreedingCoeff=0.9950;MQ=87.13;MQ0=1;MQRankSum=-8.889;QD=97.77;ReadPosRankSum=1.334;VQSLOD=3.7366;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:87.30:0,87,2939	0/0:13,0:13:39.13:0,39,1286	0/0:36,0:36:99:0,102,3055	0/0:13,0:13:22.06:0,22,737	0/0:24,0:24:69.19:0,69,2252	0/0:23,0:23:66.23:0,66,2134	0/0:20,0:20:57.20:0,57,1901	0/0:28,0:28:63.19:0,63,1931	1/1:6,10:18:36.12:1999,36,0	0/0:29,0:29:75.26:0,75,2521	0/0:30,0:30:81.23:0,81,2602	0/0:23,0:23:69.24:0,69,2366	0/0:15,0:15:45.14:0,45,1459	0/0:15,0:15:42.14:0,42,1427	0/0:22,0:21:63.19:0,63,1893	0/0:13,0:13:36.11:0,36,1156	1/1:11,10:23:39.13:2111,39,0	1/1:9,8:19:33.11:1757,33,0	0/0:20,0:20:54.18:0,54,1624	0/0:37,0:37:99:0,99,3152	0/0:17,0:17:42.14:0,42,1440	0/0:17,0:17:48.16:0,48,1596	0/0:23,0:23:66.16:0,66,1934	0/0:9,0:9:24.08:0,24,766	0/0:32,0:32:96.33:0,96,3208	0/0:27,0:27:75.26:0,75,2569	0/0:23,0:23:66.23:0,66,2245	0/0:7,0:7:18.06:0,18,617
chr10	29062030	.	T	TGC	272.72	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=5.228;DP=513;FS=18.634;HRun=0;HaplotypeScore=152.4786;InbreedingCoeff=0.9714;MQ=76.54;MQ0=0;MQRankSum=-4.608;QD=11.36;ReadPosRankSum=-0.993;VQSLOD=1.8864;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:60.20:0,60,978	0/0:10,0:10:24.08:0,24,391	0/0:18,0:18:54.18:0,54,881	0/0:13,0:13:39.13:0,39,636	0/0:25,0:25:60.20:0,60,977	0/0:27,0:27:54.18:0,54,880	0/0:13,0:13:27.09:0,27,440	0/0:35,0:35:72.20:0,72,1503	1/1:2,5:7:14.95:125,15,0	0/0:27,0:27:78.26:0,78,1241	0/0:25,0:25:51.17:0,51,830	0/0:17,0:17:45.14:0,45,709	0/0:16,0:16:42.14:0,42,684	0/0:24,0:24:42.13:0,42,660	0/0:21,0:21:48.16:0,48,782	0/0:23,0:23:48.16:0,48,780	1/1:3,7:10:18.02:172,18,0	1/1:2,5:7:11.92:111,12,0	0/0:20,0:20:57.19:0,57,929	0/0:23,0:23:51.17:0,51,831	0/0:13,0:13:27.09:0,27,440	0/0:27,0:27:66.23:0,66,1073	0/0:15,0:15:24.08:0,24,391	0/0:21,0:21:33:0,33,648	0/0:16,0:16:36.12:0,36,586	0/0:17,0:17:51.17:0,51,821	0/0:12,0:12:27.09:0,27,431	0/0:5,0:5:15.05:0,15,244
chr10	29062065	.	G	GGTGAGCACAC	57167.06	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-7.909;DP=567;FS=0.639;HRun=0;HaplotypeScore=128.0525;InbreedingCoeff=0.7907;MQ=76.39;MQ0=0;MQRankSum=-9.772;QD=108.48;ReadPosRankSum=5.964;VQSLOD=5.1698;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,13:26:48.16:2548,48,0	1/1:0,8:10:21.07:1110,21,0	0/0:23,0:23:60.06:0,60,1648	0/0:17,0:17:48.14:0,48,1327	1/1:4,20:27:60.21:3134,60,0	1/1:3,17:27:54.19:2861,54,0	1/1:4,8:14:30.10:1526,30,0	1/1:8,10:34:93.30:4158,93,0	1/1:3,2:6:9.03:477,9,0	1/1:7,16:30:81.21:3670,81,0	1/1:2,16:31:51.18:2703,51,0	1/1:3,16:22:57.20:3014,57,0	1/1:4,10:18:42.14:2124,42,0	1/1:3,18:26:63.22:3299,63,0	1/1:1,15:22:45.15:2385,45,0	1/1:3,14:24:45.15:2388,45,0	1/1:3,5:9:0.87:463,1,0	1/1:1,4:6:9.03:479,9,0	1/1:5,9:24:66.23:2950,66,0	1/1:2,20:30:63.22:3339,63,0	1/1:1,5:10:12.04:625,12,0	1/1:3,17:25:51.18:2700,51,0	1/1:2,12:19:36.12:1905,36,0	1/1:3,7:15:5.95:212,6,0	1/1:2,15:23:48.16:2544,48,0	1/1:5,10:20:57.18:2568,57,0	1/1:3,12:18:42.14:2231,42,0	1/1:0,11:11:33.11:1755,33,0
chr10	29062149	.	T	TTTCA	613.27	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=5.474;DP=446;FS=8.374;HRun=0;HaplotypeScore=87.4385;InbreedingCoeff=0.9140;MQ=77.80;MQ0=0;MQRankSum=-3.458;QD=51.11;ReadPosRankSum=-0.593;VQSLOD=4.0668;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,99,1887	0/0:4,0:4:12.04:0,12,232	0/0:18,0:17:30.03:0,30,567	0/0:24,0:23:42.45:0,42,798	0/0:13,0:13:33.10:0,33,594	0/0:17,0:17:51.17:0,51,987	0/0:10,0:10:30.10:0,30,581	0/0:28,0:28:84.28:0,84,1560	1/1:2,5:7:15.05:382,15,0	0/0:18,0:18:48.16:0,48,882	0/0:7,0:7:21.07:0,21,358	0/0:25,0:25:69.24:0,69,1334	0/0:17,0:17:39.07:0,39,684	0/0:19,0:19:57.19:0,57,1068	0/0:19,0:19:51.17:0,51,989	0/0:24,0:24:63.22:0,63,1221	1/1:0,3:3:9.03:196,9,0	1/1:0,2:2:6.02:162,6,0	0/0:29,0:29:78.22:0,78,1430	0/0:12,0:12:36.12:0,36,686	0/0:18,0:18:51.17:0,51,983	0/0:9,0:9:27.09:0,27,501	0/0:8,0:8:18.06:0,18,348	0/0:19,0:19:48.16:0,48,930	0/0:13,0:13:30.10:0,30,576	0/0:23,0:23:66.22:0,66,1224	0/0:16,0:16:45.15:0,45,835	0/0:6,0:6:18.06:0,18,312
chr10	29062379	.	AAAAT	A	2298.42	PASS	AC=36;AF=0.818;AN=44;BaseQRankSum=-2.547;DP=285;FS=2.440;HRun=0;HaplotypeScore=64.3831;InbreedingCoeff=0.5687;MQ=69.21;MQ0=1;MQRankSum=2.876;QD=13.36;ReadPosRankSum=1.027;VQSLOD=3.1006;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:8:17.42:0,17,354	1/1:3,1:4:3.01:47,3,0	./.	./.	1/1:11,2:13:5.87:66,6,0	1/1:4,7:11:18.06:280,18,0	./.	./.	0/0:14,0:14:7.26:0,7,73	1/1:8,4:12:12.04:185,12,0	1/1:6,2:8:6.02:93,6,0	1/1:11,7:18:21.07:326,21,0	1/1:6,2:8:6.02:93,6,0	./.	1/1:8,4:12:9.03:140,9,0	1/1:7,3:10:9.03:140,9,0	0/0:19,0:19:8.99:0,9,103	0/0:16,0:16:11.95:0,12,142	1/1:5,2:7:6.02:93,6,0	1/1:8,2:10:6.02:93,6,0	1/1:4,1:5:3.01:47,3,0	1/1:7,1:8:3.01:47,3,0	1/1:3,2:5:2.13:45,2,0	./.	1/1:6,9:15:21.07:326,21,0	1/1:7,3:10:9.03:137,9,0	1/1:4,6:10:15.05:233,15,0	1/1:4,2:5:3.01:47,3,0
chr10	29065446	.	T	TA	15344.48	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-4.498;DP=703;FS=0.413;HRun=8;HaplotypeScore=107.6123;InbreedingCoeff=0.9796;MQ=83.06;MQ0=0;MQRankSum=-3.673;QD=26.14;ReadPosRankSum=1.597;VQSLOD=4.4030;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,0:29:54.14:276,54,0	1/1:2,6:8:17.91:174,18,0	0/0:25,1:25:10.10:0,10,281	0/0:22,0:21:11.93:0,12,248	1/1:4,30:34:84.08:910,84,0	1/1:2,16:18:45.13:519,45,0	1/1:1,16:17:45.13:519,45,0	1/1:6,20:27:59.99:653,60,0	0/0:22,0:22:59.93:0,60,526	1/1:5,33:38:99:1099,99,0	1/1:2,18:20:50.98:539,51,0	1/1:4,25:29:66.15:747,66,0	1/1:4,25:29:66.19:752,66,0	1/1:2,22:24:35.72:665,36,0	1/1:4,26:30:41.76:734,42,0	1/1:0,29:29:87.26:1004,87,0	0/0:25,0:25:72.02:0,72,654	0/0:21,0:21:57.02:0,57,518	1/1:2,22:24:42.23:685,42,0	1/1:4,20:25:57:601,57,0	1/1:1,23:24:60.18:692,60,0	1/1:5,30:35:72.17:816,72,0	1/1:3,18:22:45.13:517,45,0	1/1:2,23:26:69.04:776,69,0	1/1:4,18:22:48.14:554,48,0	1/1:3,21:24:62.17:683,62,0	1/1:5,31:36:56.79:907,57,0	1/1:1,16:17:45.13:519,45,0
chr10	29066530	.	C	CACAGGGT	1732.21	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-3.628;DP=707;FS=2.961;HRun=0;HaplotypeScore=152.3449;InbreedingCoeff=0.9690;MQ=71.85;MQ0=0;MQRankSum=-4.812;QD=23.73;ReadPosRankSum=0.939;VQSLOD=3.0193;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:98.35:0,98,1947	0/0:9,0:9:21:0,21,371	0/0:21,0:21:39.54:0,40,516	0/0:25,0:25:41.73:0,42,634	0/0:14,0:14:39.11:0,39,825	0/0:23,0:23:63.10:0,63,1147	0/0:38,0:38:99:0,102,1900	0/0:20,0:20:51.05:0,51,639	1/1:4,19:24:26.93:1031,27,0	0/0:27,0:27:75.22:0,75,1559	0/0:14,0:14:42.03:0,42,673	0/0:37,0:37:99:0,99,1847	0/0:37,0:37:98.12:0,98,2267	0/0:33,0:33:84.14:0,84,1600	0/0:29,0:29:84.07:0,84,1566	0/0:33,0:33:93.14:0,93,1966	1/1:4,26:33:15.05:584,15,0	1/1:3,13:15:8.96:252,9,0	0/0:14,0:14:38.84:0,39,395	0/0:12,0:12:27.05:0,27,527	0/0:58,0:58:99:0,157,3233	0/0:19,0:19:54.11:0,54,1078	0/0:21,0:21:60.08:0,60,1148	0/0:28,0:28:78.11:0,78,1354	0/0:21,0:21:63.11:0,63,1201	0/0:31,0:31:84.22:0,84,1693	0/0:23,0:23:60.07:0,60,1097	0/0:9,0:9:21.04:0,21,367
chr10	29067062	.	CA	C	4462.86	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=3.465;DP=745;FS=3.725;HRun=3;HaplotypeScore=88.2099;InbreedingCoeff=0.9995;MQ=66.38;MQ0=0;MQRankSum=-0.443;QD=34.87;ReadPosRankSum=2.150;VQSLOD=5.4556;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,37:38:99:1302,105,0	0/0:15,0:15:45.15:0,45,648	0/0:16,0:15:27.05:0,27,354	0/0:14,0:13:30.04:0,30,344	0/0:26,0:26:75.23:0,75,1045	0/0:28,0:28:81.22:0,81,1125	0/0:28,0:28:78.25:0,78,1105	0/0:25,0:25:75.24:0,75,1049	1/1:0,28:28:84.26:1041,84,0	0/0:31,0:31:93.31:0,93,1325	0/0:15,0:15:45.15:0,45,647	0/0:29,0:29:81.27:0,81,1166	0/0:35,0:35:99:0,102,1469	0/0:24,0:24:72.23:0,72,1004	0/0:38,0:38:99:0,114,1625	0/0:27,0:27:78.24:0,78,1088	1/1:0,42:42:99:1450,117,0	1/1:0,20:20:54.17:669,54,0	0/0:23,0:23:66.22:0,66,950	0/0:31,0:31:90.29:0,90,1278	0/0:47,0:47:99:0,138,1969	0/0:32,0:32:90.30:0,90,1296	0/0:17,0:17:45.15:0,45,647	0/0:27,0:27:78.26:0,78,1123	0/0:21,0:21:60.20:0,60,863	0/0:30,0:30:90.30:0,90,1296	0/0:24,0:23:72.24:0,72,1037	0/0:14,0:14:42.14:0,42,604
chr10	29067812	.	G	GAGA	7544.80	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=0.501;DP=789;FS=8.203;HRun=0;HaplotypeScore=106.6561;InbreedingCoeff=0.9985;MQ=63.15;MQ0=0;MQRankSum=-1.932;QD=55.07;ReadPosRankSum=2.984;VQSLOD=7.1732;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,41:45:99:2318,105,0	0/0:12,0:12:33.11:0,33,549	0/0:17,0:15:41.14:0,41,609	0/0:21,0:20:42.14:0,42,685	0/0:22,0:22:66.22:0,66,1070	0/0:31,0:31:87.28:0,87,1420	0/0:40,0:40:99:0,117,1890	0/0:35,0:35:96.30:0,96,1505	1/1:1,29:30:75.26:1698,75,0	0/0:30,0:30:81.27:0,81,1325	0/0:19,0:19:54.17:0,54,872	0/0:35,0:35:96.33:0,96,1590	0/0:24,0:24:72.23:0,72,1173	0/0:25,0:25:72.23:0,72,1171	0/0:39,0:39:99:0,111,1844	0/0:31,0:31:87.30:0,87,1448	1/1:1,29:30:81.28:1833,81,0	1/1:1,28:32:75.26:1697,75,0	0/0:11,0:10:27.07:0,27,403	0/0:14,0:14:39.12:0,39,620	0/0:57,0:57:99:0,163,2668	0/0:26,0:26:72.22:0,72,1149	0/0:26,0:26:72.25:0,72,1198	0/0:40,0:40:99:0,117,1863	0/0:14,0:14:39.13:0,39,649	0/0:37,0:37:99:0,111,1794	0/0:39,0:39:99:0,114,1820	0/0:7,0:7:21.07:0,21,350
chr10	29068097	.	G	GA	1541.80	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=0.820;DP=595;FS=3.609;HRun=7;HaplotypeScore=87.2026;InbreedingCoeff=0.9990;MQ=75.69;MQ0=0;MQRankSum=-2.352;QD=25.28;ReadPosRankSum=0.301;VQSLOD=3.9712;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:32:75.09:0,75,717	0/0:9,0:9:27.04:0,27,261	0/0:19,0:19:47.56:0,48,410	0/0:16,0:15:32.97:0,33,298	0/0:24,0:24:69.11:0,69,666	0/0:36,0:36:96.15:0,96,926	0/0:20,0:20:42.05:0,42,400	0/0:22,0:22:48.07:0,48,463	1/1:2,22:23:60.12:706,60,0	0/0:22,0:22:66.11:0,66,637	0/0:26,0:26:63.10:0,63,608	0/0:24,0:24:66.11:0,66,637	0/0:16,0:16:45.07:0,45,435	0/0:15,0:15:27.02:0,27,254	0/0:26,0:26:78.13:0,78,753	0/0:15,0:15:42.03:0,42,393	1/1:3,19:22:48.15:580,48,0	1/1:3,12:15:33.10:399,33,0	0/0:25,0:25:54.06:0,54,516	0/0:26,0:26:72.10:0,72,690	0/0:18,0:18:54.09:0,54,521	0/0:24,0:24:69.11:0,69,666	0/0:18,0:18:41.96:0,42,405	0/0:20,0:20:54.08:0,54,521	0/0:19,0:19:45.07:0,45,435	0/0:20,0:20:48.05:0,48,454	0/0:24,0:24:60.09:0,60,579	0/0:17,0:17:48.08:0,48,463
chr10	29068224	.	T	TCACA	953.80	PASS	AB=1.000;AC=37;AF=0.804;AN=46;BaseQRankSum=-2.639;DP=482;FS=8.371;HRun=0;HaplotypeScore=97.4378;InbreedingCoeff=0.2368;MQ=49.70;MQ0=29;MQRankSum=1.503;QD=2.97;ReadPosRankSum=-0.702;VQSLOD=1.2604;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:18:0.89:2,1,0	1/1:5,0:5:3.01:42,3,0	./.	./.	1/1:10,3:13:3.01:69,3,0	1/1:25,0:24:9.02:128,9,0	1/1:25,0:25:2.93:22,3,0	./.	0/0:12,0:10:0:0,0,0	1/1:18,0:17:3.63:10,4,0	1/1:7,0:6:3.01:68,3,0	1/1:19,0:18:6.02:84,6,0	1/1:11,1:12:3.01:69,3,0	./.	1/1:25,0:25:6.02:84,6,0	1/1:17,0:16:6.48:66,6,0	0/0:27,0:25:2.65:0,3,27	0/0:15,0:14:1.82:0,2,5	1/1:11,0:11:4.83:65,5,0	0/1:7,0:7:0:0,0,0	1/1:38,0:35:2.32:47,2,0	./.	1/1:15,0:15:3.01:47,3,0	1/1:21,0:20:5.73:111,6,0	1/1:16,0:16:6.02:88,6,0	1/1:11,0:11:4.21:23,4,0	1/1:17,0:17:2.97:20,3,0	0/0:7,0:7:0:0,0,0
chr10	29068774	.	TTTGTTGTTG	T	11743.89	PASS	AB=0.671;AC=50;AF=0.962;AN=52;BaseQRankSum=0.367;DP=693;FS=2.057;HRun=0;HaplotypeScore=175.5241;InbreedingCoeff=-0.0758;MQ=61.07;MQ0=2;MQRankSum=-1.546;QD=18.26;ReadPosRankSum=1.703;VQSLOD=4.3011;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:21,0:42:59.37:97,0,59	1/1:4,2:6:3.01:82,3,0	./.	./.	1/1:14,10:24:24.08:510,24,0	1/1:11,11:23:21.07:554,21,0	0/1:15,14:29:19.59:399,0,20	1/1:24,0:23:6.02:95,6,0	1/1:6,0:24:24.08:502,24,0	1/1:17,12:29:30.05:645,30,0	1/1:16,6:22:14.98:251,15,0	1/1:14,13:27:30.99:820,31,0	1/1:9,12:22:24.08:635,24,0	1/1:12,17:29:30.10:768,30,0	1/1:11,16:27:32.47:818,32,0	1/1:13,16:29:35.91:912,36,0	1/1:8,0:23:12.04:251,12,0	1/1:6,0:8:3.01:63,3,0	1/1:18,12:30:35.34:761,35,0	1/1:19,10:28:16.12:454,16,0	1/1:22,13:35:5.50:46,6,0	1/1:11,8:19:12.04:302,12,0	1/1:9,11:20:18.06:432,18,0	1/1:11,13:24:14.92:396,15,0	1/1:11,14:25:21.07:572,21,0	1/1:13,10:23:27.09:574,27,0	1/1:19,15:34:26.84:724,27,0	1/1:14,2:16:3.01:82,3,0
chr10	29070472	.	A	AT	2112.70	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=10.935;DP=597;FS=2.942;HRun=7;HaplotypeScore=63.2106;InbreedingCoeff=0.9873;MQ=83.82;MQ0=0;MQRankSum=-2.210;QD=26.08;ReadPosRankSum=1.198;VQSLOD=4.4560;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,25:30:81.24:963,81,0	0/0:10,0:10:30.05:0,30,290	0/0:18,0:18:48.06:0,48,456	0/0:20,0:20:15.87:0,16,325	0/0:24,0:24:63.07:0,63,606	0/0:18,0:18:39.06:0,39,377	0/0:20,0:20:57.08:0,57,550	0/0:26,0:26:69.11:0,69,666	1/1:7,18:25:60.15:695,60,0	0/0:22,0:22:54.06:0,54,518	0/0:10,0:10:30.05:0,30,290	0/0:33,0:33:93.09:0,93,887	0/0:13,0:13:33.05:0,33,318	0/0:22,0:22:60.09:0,60,579	0/0:25,0:25:63.08:0,63,603	0/0:26,0:26:75.12:0,75,724	1/1:0,6:6:12.04:144,12,0	1/1:5,15:20:39.12:468,39,0	0/0:20,0:20:48.06:0,48,458	0/0:25,0:25:63.09:0,63,607	0/0:33,0:33:93.14:0,93,897	0/0:23,0:23:63.09:0,63,607	0/0:24,0:24:60.08:0,60,574	0/0:17,0:17:45.06:0,45,434	0/0:22,0:22:54.07:0,54,521	0/0:24,0:24:54.07:0,54,517	0/0:24,0:24:63.06:0,63,595	0/0:17,0:17:51.08:0,51,492
chr10	29070968	.	TTCTTATATG	T	21455.25	PASS	AB=1.000;AC=47;AF=0.839;AN=56;BaseQRankSum=12.601;DP=474;FS=2.229;HRun=0;HaplotypeScore=256.3571;InbreedingCoeff=0.8038;MQ=54.81;MQ0=0;MQRankSum=-11.112;QD=53.64;ReadPosRankSum=1.392;VQSLOD=4.6026;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,0:12:21.03:407,21,0	1/1:11,0:11:27.01:656,27,0	0/1:9,0:9:24.13:24,0,459	0/0:3,0:3:6.02:0,6,277	1/1:24,0:24:47.76:1052,48,0	1/1:17,0:17:39.13:1030,39,0	1/1:16,0:16:33.11:834,33,0	1/1:20,0:20:33.10:829,33,0	0/0:20,0:20:54.19:0,54,2583	1/1:23,1:24:48.16:1308,48,0	1/1:12,0:12:23.97:497,24,0	1/1:22,0:22:48.07:1144,48,0	1/1:24,0:24:57.18:1419,57,0	1/1:18,0:18:45.15:1145,45,0	1/1:26,0:26:63.20:1538,63,0	1/1:17,0:17:42.13:1053,42,0	0/0:32,0:32:93.28:0,93,4401	0/0:19,0:19:57.20:0,57,2510	1/1:13,0:13:30.10:821,30,0	1/1:13,2:15:36.08:889,36,0	1/1:7,0:7:12.04:317,12,0	1/1:9,0:9:21.07:541,21,0	1/1:14,0:14:29.84:727,30,0	1/1:7,0:7:6.42:115,6,0	1/1:16,0:16:36.12:904,36,0	1/1:26,0:26:57.19:1505,57,0	1/1:34,1:35:96.28:2285,96,0	1/1:6,0:6:15.05:415,15,0
chr10	29070970	.	CTTA	C	12174.49	PASS	AB=1.000;AC=47;AF=0.839;AN=56;BaseQRankSum=13.493;DP=386;FS=2.212;HRun=0;HaplotypeScore=219.2180;InbreedingCoeff=0.8383;MQ=58.77;MQ0=0;MQRankSum=-11.737;QD=39.02;ReadPosRankSum=3.117;VQSLOD=5.5667;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,8:8:18.86:227,19,0	1/1:0,8:10:22.34:376,22,0	0/1:8,0:8:3.93:4,0,238	0/0:4,0:4:6.02:0,6,142	1/1:1,17:18:37.36:593,37,0	1/1:0,13:13:39.13:602,39,0	1/1:1,10:11:33.10:490,33,0	1/1:2,9:11:26.72:407,27,0	0/0:18,0:18:54.19:0,54,1273	1/1:1,14:16:48.14:689,48,0	1/1:0,6:9:18.33:278,18,0	1/1:1,14:16:40.40:642,40,0	1/1:2,18:20:55.07:834,55,0	1/1:1,15:16:45.15:688,45,0	1/1:1,20:21:62.68:913,63,0	1/1:1,13:14:39.13:603,39,0	0/0:32,0:32:93.32:0,93,2166	0/0:20,0:20:60.15:0,60,1248	1/1:1,9:10:30.10:434,30,0	1/1:2,11:13:33.11:508,33,0	1/1:0,5:5:12.04:186,12,0	1/1:0,7:7:21.07:325,21,0	1/1:1,10:11:30.10:438,30,0	1/1:1,6:7:5.44:57,5,0	1/1:1,11:12:36.12:543,36,0	1/1:2,17:19:57.18:843,57,0	1/1:4,26:32:86.47:1264,86,0	1/1:0,5:5:15.05:230,15,0
chr10	29070975	.	ATGTCCACTTG	A	22384	PASS	AB=1.000;AC=47;AF=0.839;AN=56;BaseQRankSum=13.234;DP=376;FS=4.473;HRun=0;HaplotypeScore=232.4590;InbreedingCoeff=0.8057;MQ=57.85;MQ0=0;MQRankSum=-11.414;QD=74.37;ReadPosRankSum=2.510;VQSLOD=4.3488;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,0:8:15.05:366,15,0	1/1:10,0:10:24.08:678,24,0	0/1:8,0:8:21.23:21,0,480	0/0:4,0:4:7.58:0,8,174	1/1:17,0:17:42.13:1089,42,0	1/1:13,0:13:39.13:1104,39,0	1/1:10,0:10:30.10:832,30,0	1/1:9,5:14:42.10:1012,42,0	0/0:17,0:17:51.18:0,51,2626	1/1:16,0:16:45.15:1362,45,0	1/1:8,0:9:21.07:524,21,0	1/1:15,0:15:42.14:1157,42,0	1/1:19,0:19:54.19:1489,54,0	1/1:16,0:16:45.15:1225,45,0	1/1:20,0:20:60.21:1631,60,0	1/1:13,0:13:39.13:1099,39,0	0/0:35,0:35:99:0,99,5317	0/0:19,0:19:54.19:0,54,2678	1/1:9,0:9:27.09:833,27,0	1/1:13,0:13:33.11:930,33,0	1/1:5,0:5:12.04:330,12,0	1/1:7,0:7:21.07:575,21,0	1/1:10,0:10:30.10:777,30,0	1/1:6,0:6:5.74:121,6,0	1/1:11,0:11:33.11:930,33,0	1/1:18,0:18:52.99:1534,53,0	1/1:29,0:29:86.87:2313,87,0	1/1:5,0:5:15.05:451,15,0
chr10	29070978	.	TC	T	4096.29	PASS	AB=0.667;AC=45;AF=0.804;AN=56;BaseQRankSum=13.648;DP=375;FS=2.176;HRun=2;HaplotypeScore=231.2393;InbreedingCoeff=0.6675;MQ=61.09;MQ0=0;MQRankSum=-12.066;QD=13.79;ReadPosRankSum=2.941;VQSLOD=3.4389;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:0,8:8:8.58:49,0,9	1/1:0,8:8:23.29:132,23,0	0/1:8,0:8:16.07:16,0,138	0/0:7,0:7:8.05:0,8,110	1/1:0,17:17:13.89:172,14,0	1/1:1,13:14:29.24:200,29,0	1/1:0,10:10:28.99:158,29,0	1/1:5,9:14:26.37:159,26,0	0/0:17,0:17:51.17:0,51,760	1/1:2,14:16:43.63:254,44,0	1/1:3,6:9:10.83:82,11,0	1/1:1,14:15:40.35:219,40,0	1/1:0,18:18:51.79:282,52,0	1/1:2,15:17:32.50:215,33,0	1/1:0,20:20:47.21:294,47,0	1/1:0,13:13:37.76:211,38,0	0/0:35,0:35:99:0,99,1482	0/0:19,0:19:54.12:0,54,758	1/1:0,9:9:26.35:156,26,0	1/1:2,11:13:31.96:176,32,0	1/1:0,5:5:10.93:54,11,0	1/1:0,7:7:20.16:107,20,0	1/1:0,10:10:28.19:146,28,0	0/1:0,6:6:4.02:10,0,4	1/1:0,11:11:31.97:179,32,0	1/1:0,17:17:49.81:298,50,0	1/1:1,26:27:78.10:439,78,0	1/1:0,5:5:14.69:88,15,0
chr10	29070981	.	ACT	A	7623.84	PASS	AB=1.000;AC=47;AF=0.839;AN=56;BaseQRankSum=13.335;DP=373;FS=8.376;HRun=0;HaplotypeScore=225.6249;InbreedingCoeff=0.8132;MQ=59.87;MQ0=0;MQRankSum=-11.424;QD=25.58;ReadPosRankSum=2.287;VQSLOD=4.6425;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,8:8:9.98:112,10,0	1/1:0,8:8:24.04:233,24,0	0/1:9,0:9:7.94:8,0,226	0/0:6,0:6:9.64:0,10,113	1/1:0,17:17:33.47:362,33,0	1/1:1,13:14:40.31:384,40,0	1/1:0,10:10:30.04:286,30,0	1/1:5,9:14:33.02:319,33,0	0/0:16,0:16:48.16:0,48,972	1/1:1,14:15:45.09:452,45,0	1/1:1,7:8:18.49:171,18,0	1/1:0,15:15:42.07:408,42,0	1/1:1,18:19:56.96:529,57,0	1/1:2,15:17:45.89:423,46,0	1/1:0,20:20:57.08:547,57,0	1/1:1,13:14:42.04:402,42,0	0/0:36,0:36:99:0,105,2096	0/0:17,0:17:45.11:0,45,873	1/1:0,9:9:27.06:273,27,0	1/1:2,11:13:35.73:331,36,0	1/1:0,5:5:12.01:112,12,0	1/1:0,7:7:21.02:198,21,0	1/1:0,10:10:29.94:276,30,0	1/1:0,6:6:3.48:29,3,0	1/1:0,11:11:33.05:323,33,0	1/1:0,17:17:51.11:517,51,0	1/1:1,26:27:81.05:778,81,0	1/1:0,5:5:15.03:151,15,0
chr10	29070985	.	G	GATA	21781.66	PASS	AB=1.000;AC=47;AF=0.839;AN=56;BaseQRankSum=12.759;DP=474;FS=9.343;HRun=0;HaplotypeScore=240.9967;InbreedingCoeff=0.8457;MQ=53.35;MQ0=0;MQRankSum=-11.607;QD=54.18;ReadPosRankSum=0.014;VQSLOD=3.6385;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:15:27.09:585,27,0	1/1:9,0:9:24.08:484,24,0	0/1:9,0:9:45.25:45,0,214	0/0:6,0:6:10.33:0,10,126	1/1:22,0:22:45.06:887,45,0	1/1:17,1:19:48.16:997,48,0	1/1:18,0:18:51.18:1088,51,0	1/1:24,0:24:69.20:1437,69,0	0/0:16,0:16:48.16:0,48,895	1/1:22,1:23:66.22:1408,66,0	1/1:11,0:11:27.08:500,27,0	1/1:18,0:18:48.16:968,48,0	1/1:24,0:24:69.24:1402,69,0	1/1:16,2:18:51.17:994,51,0	1/1:23,0:23:69.24:1374,69,0	1/1:19,0:19:57.20:1212,57,0	0/0:35,0:35:99:0,102,1886	0/0:15,0:15:42.14:0,42,783	1/1:16,0:16:45.15:975,45,0	1/1:18,0:18:51.18:1079,51,0	1/1:6,0:6:15.05:314,15,0	1/1:7,0:7:21.07:405,21,0	1/1:12,0:12:30.10:592,30,0	1/1:10,0:10:17.50:356,17,0	1/1:16,0:16:42.14:876,42,0	1/1:24,0:24:66.21:1335,66,0	1/1:34,0:35:99:2076,102,0	1/1:6,0:6:18.06:391,18,0
chr10	29071306	.	GTGTGTGAGAAAA	G	2534.33	PASS	AB=0.968;AC=23;AF=0.460;AN=50;BaseQRankSum=1.907;DP=484;FS=7.455;HRun=0;HaplotypeScore=149.3403;InbreedingCoeff=-0.0822;MQ=45.45;MQ0=15;MQRankSum=-2.290;QD=8.56;ReadPosRankSum=7.625;VQSLOD=1.1793;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:24:67.08:88,0,67	0/1:7,0:7:0:0,0,0	./.	./.	0/0:11,0:11:0.89:0,1,2	0/0:19,0:19:2.68:0,3,36	0/0:40,0:36:16.93:0,17,170	0/1:20,0:20:34.58:385,0,35	1/1:23,0:22:1.95:23,2,0	0/1:14,0:12:40.26:266,0,40	0/1:6,7:13:30.72:41,0,31	0/1:22,0:21:25.13:172,0,25	1/1:22,0:19:10.07:253,10,0	0/0:22,0:20:15.94:0,16,132	0/1:26,0:26:61.74:98,0,62	0/1:24,0:23:35.47:35,0,39	1/1:13,0:11:3.06:217,3,0	1/1:4,0:4:6.02:135,6,0	0/1:19,0:18:54.49:367,0,54	0/0:16,1:17:5.98:0,6,47	0/1:16,0:15:24.50:24,0,56	./.	0/0:7,0:6:6:0,6,70	0/0:34,0:31:3.01:0,3,71	0/0:21,0:21:8.76:0,9,71	0/1:26,0:26:86.76:515,0,87	1/1:16,0:14:2.54:17,3,0	1/1:5,0:2:5.98:47,6,0
chr10	29071308	.	GTGTGAGAAAA	G	3848.56	PASS	AB=0.983;AC=31;AF=0.620;AN=50;BaseQRankSum=-2.780;DP=473;FS=16.477;HRun=0;HaplotypeScore=132.6138;InbreedingCoeff=-0.0011;MQ=45.17;MQ0=15;MQRankSum=-0.636;QD=11.35;ReadPosRankSum=5.098;VQSLOD=1.2829;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:24:43.96:92,0,44	0/1:7,0:7:0.01:0,0,0	./.	./.	0/1:12,0:12:10.88:11,0,20	0/0:19,0:19:2.61:0,3,18	0/0:38,1:35:3.02:0,3,48	1/1:18,0:18:35.69:455,36,0	1/1:21,1:21:2.37:35,2,0	0/1:13,1:12:1.29:338,0,1	1/1:10,0:10:6.02:74,6,0	0/1:19,1:19:7.78:294,0,8	1/1:22,0:19:29.71:440,30,0	0/1:22,0:20:8.67:9,0,91	0/1:23,1:24:15.27:242,0,15	1/1:25,0:23:3.01:45,3,0	1/1:13,0:11:3.06:281,3,0	1/1:4,0:4:6.02:160,6,0	1/1:6,12:17:0.58:457,1,0	0/0:18,0:18:1.62:0,2,4	0/1:15,0:14:15.89:70,0,16	./.	0/0:6,0:5:2.99:0,3,23	0/0:34,0:31:3.01:0,3,47	1/1:21,0:21:0.99:2,1,0	0/1:26,0:26:33.05:720,0,33	1/1:16,0:14:2.58:28,3,0	1/1:5,0:2:6.02:94,6,0
chr10	29071310	.	GTGAGAAAA	G	4552.73	PASS	AB=0.916;AC=37;AF=0.740;AN=50;BaseQRankSum=-5.137;DP=467;FS=27.072;HRun=0;HaplotypeScore=120.6475;InbreedingCoeff=-0.0834;MQ=45.35;MQ0=15;MQRankSum=-1.538;QD=10.66;ReadPosRankSum=2.496;VQSLOD=2.1057;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:24:20.40:92,0,20	0/1:7,0:7:0.01:0,0,0	./.	./.	0/1:1,12:13:20.02:29,0,20	0/1:19,0:19:0:0,0,0	0/1:37,0:33:15.68:41,0,16	1/1:16,0:16:38.74:467,39,0	1/1:22,0:21:2.95:36,3,0	1/1:4,10:12:27.15:428,27,0	1/1:10,0:10:5.85:74,6,0	0/1:20,0:19:7.11:403,0,7	1/1:22,0:19:32.14:623,32,0	0/1:22,0:20:54.09:54,0,87	0/1:24,0:24:15.23:343,0,15	1/1:25,0:23:2.84:44,3,0	1/1:13,0:11:3.06:226,3,0	1/1:4,0:4:6.02:137,6,0	1/1:18,0:17:15.38:460,15,0	1/1:18,0:18:5.78:38,6,0	0/1:14,0:13:1.89:82,0,2	0/1:4,15:18:0:0,0,0	./.	0/0:34,0:31:2.99:0,3,24	1/1:20,0:20:5.98:47,6,0	0/1:23,0:23:12.55:774,0,13	1/1:17,0:15:1.95:20,2,0	1/1:5,0:2:6.02:134,6,0
chr10	29071311	.	TGAGAAAAA	T	2816.96	PASS	AB=1.000;AC=30;AF=0.652;AN=46;BaseQRankSum=-5.309;DP=462;FS=58.475;HRun=0;HaplotypeScore=125.1932;InbreedingCoeff=-0.0448;MQ=45.14;MQ0=16;MQRankSum=-2.279;QD=7.94;ReadPosRankSum=1.768;VQSLOD=-0.0018;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:23:11.73:0,12,73	./.	./.	./.	0/1:13,0:13:9.89:10,0,56	0/1:19,0:19:0:0,0,0	0/0:37,0:33:0.01:0,0,0	1/1:16,0:16:38.10:407,38,0	1/1:22,0:21:3:37,3,0	1/1:14,0:12:20.29:251,20,0	1/1:10,0:10:3.01:48,3,0	0/1:19,0:18:98.57:271,0,99	1/1:21,1:19:28.95:407,29,0	0/1:21,0:19:9.78:10,0,192	0/1:24,0:24:69.33:180,0,69	1/1:25,0:23:2.98:28,3,0	0/1:12,0:10:27.80:167,0,28	1/1:4,0:4:6.02:90,6,0	0/1:17,0:16:29.93:351,0,30	0/1:18,0:18:0:0,0,0	0/1:15,0:14:29.49:42,0,29	0/1:19,0:18:0:0,0,0	./.	./.	1/1:4,16:20:0.47:1,0,0	0/1:23,0:22:99:548,0,136	0/1:17,0:15:0.39:0,0,1	1/1:5,0:2:6.02:91,6,0
chr10	29071314	.	GAAAA	G	4169.68	PASS	AB=0.679;AC=38;AF=0.864;AN=44;BaseQRankSum=-2.777;DP=451;FS=0.000;HRun=5;HaplotypeScore=104.8294;InbreedingCoeff=0.3506;MQ=45.37;MQ0=22;MQRankSum=1.173;QD=12.34;ReadPosRankSum=0.761;VQSLOD=-0.6103;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:20:18.96:262,19,0	./.	./.	./.	1/1:13,0:13:5.86:35,6,0	./.	0/0:7,27:30:0.05:0,0,0	1/1:4,11:15:38.15:442,38,0	1/1:2,19:21:3.01:37,3,0	1/1:13,1:12:24.33:344,24,0	1/1:8,2:10:3.01:48,3,0	1/1:18,0:18:31.69:417,32,0	1/1:20,3:20:33.22:487,33,0	1/1:20,0:19:1.25:23,1,0	1/1:21,1:24:25.02:337,25,0	1/1:3,21:22:2.99:50,3,0	1/1:11,0:9:20.08:229,20,0	1/1:5,0:4:6.02:97,6,0	1/1:16,0:14:38.52:463,39,0	0/1:2,15:17:0:0,0,0	1/1:14,0:12:5.73:64,6,0	0/1:15,3:18:0:0,0,0	./.	./.	1/1:17,2:19:0.47:1,0,0	1/1:22,1:22:54.55:742,55,0	0/0:2,16:16:0.39:0,0,1	1/1:7,0:2:6.02:91,6,0
chr10	29071915	.	TG	T	22646.08	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=8.698;DP=757;FS=4.750;HRun=1;HaplotypeScore=112.6805;InbreedingCoeff=0.9983;MQ=83.29;MQ0=0;MQRankSum=-5.009;QD=38.98;ReadPosRankSum=2.135;VQSLOD=4.7221;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,166,2574	1/1:0,12:12:36.12:503,36,0	0/0:18,0:18:47.66:0,48,734	0/0:25,0:25:57:0,57,962	1/1:0,44:44:99:1635,117,0	1/1:0,25:25:75.25:1049,75,0	1/1:1,31:32:87.29:1216,87,0	1/1:0,29:29:84.27:1157,84,0	0/0:24,0:24:72.25:0,72,1145	1/1:0,22:22:66.22:923,66,0	1/1:0,21:21:60.20:839,60,0	1/1:0,22:22:60.20:838,60,0	1/1:0,26:26:75.25:1047,75,0	1/1:0,23:23:63.21:881,63,0	1/1:0,23:23:60.20:839,60,0	1/1:0,27:27:75.25:1049,75,0	0/0:25,0:25:75.26:0,75,1198	0/0:29,0:28:87.23:0,87,1337	1/1:0,21:21:63.18:860,63,0	1/1:0,31:31:84.17:1129,84,0	1/1:0,30:30:81.27:1133,81,0	1/1:0,37:37:99:1404,102,0	1/1:0,27:27:75.25:1049,75,0	1/1:0,36:36:99:1362,99,0	1/1:0,25:25:69.23:965,69,0	1/1:0,29:29:87.29:1216,87,0	1/1:0,33:33:93.31:1300,93,0	1/1:0,6:6:18.06:252,18,0
chr10	29072063	.	A	AC	19787.73	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=15.920;DP=677;FS=2.398;HRun=2;HaplotypeScore=144.3087;InbreedingCoeff=0.9959;MQ=87.58;MQ0=0;MQRankSum=-6.353;QD=38.27;ReadPosRankSum=1.226;VQSLOD=4.3656;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,138,1668	1/1:0,8:8:24.08:345,24,0	0/0:24,0:24:66.17:0,66,782	0/0:27,0:27:69.15:0,69,808	1/1:2,30:32:84.75:1208,85,0	1/1:0,29:29:84.28:1209,84,0	1/1:1,40:41:99:1512,105,0	1/1:5,24:29:69.23:994,69,0	0/0:16,0:16:48.13:0,48,582	1/1:0,25:25:75.25:1078,75,0	1/1:1,10:11:30.10:432,30,0	1/1:2,25:27:60.20:864,60,0	1/1:1,23:24:66.22:950,66,0	1/1:2,26:28:69.23:993,69,0	1/1:4,22:26:66.22:950,66,0	1/1:0,21:21:57.19:821,57,0	0/0:25,0:25:72.20:0,72,877	0/0:22,0:22:66.19:0,66,804	1/1:5,15:20:54.15:746,54,0	1/1:1,19:20:54.14:754,54,0	1/1:0,42:42:99:1727,120,0	1/1:1,21:22:60.20:863,60,0	1/1:0,8:8:24.08:344,24,0	1/1:0,31:31:84.28:1210,84,0	1/1:5,12:17:42.13:583,42,0	1/1:1,28:29:84.28:1209,84,0	1/1:1,18:20:56.08:781,56,0	1/1:0,7:7:15.05:216,15,0
chr10	29072575	.	TTTAA	T	17006.09	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=10.224;DP=470;FS=4.281;HRun=0;HaplotypeScore=153.6848;InbreedingCoeff=0.9553;MQ=57.03;MQ0=0;MQRankSum=-14.124;QD=51.07;ReadPosRankSum=-1.091;VQSLOD=5.6034;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,111,1417	1/1:1,9:10:27.09:490,27,0	0/0:15,0:10:24.01:0,24,471	0/0:12,0:9:2.63:0,3,285	1/1:2,19:21:54.18:970,54,0	1/1:4,14:18:51.17:912,51,0	1/1:5,11:16:45.15:763,45,0	1/1:5,20:25:75.24:1321,75,0	0/0:14,0:14:39.13:0,39,1068	1/1:5,13:18:54.18:926,54,0	1/1:2,20:22:66.19:1125,66,0	1/1:2,9:11:33.11:595,33,0	1/1:0,12:12:36.12:674,36,0	1/1:2,9:11:33.11:553,33,0	1/1:6,8:14:39.13:628,39,0	1/1:0,10:10:30.10:567,30,0	0/0:32,0:32:93.32:0,93,2407	0/0:17,0:17:51.17:0,51,1279	1/1:0,11:11:33.11:624,33,0	1/1:1,22:23:69.22:1263,69,0	1/1:0,7:7:18.06:340,18,0	1/1:0,21:21:60.21:1113,60,0	1/1:0,8:8:21.07:390,21,0	1/1:0,7:7:15.52:278,16,0	1/1:2,22:24:69.23:1248,69,0	1/1:3,12:15:45.15:813,45,0	1/1:0,19:19:51.17:962,51,0	1/1:5,5:10:30.09:448,30,0
chr10	29072577	.	TA	T	3466.02	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=11.282;DP=465;FS=1.022;HRun=5;HaplotypeScore=175.2807;InbreedingCoeff=0.9156;MQ=58.18;MQ0=0;MQRankSum=-10.882;QD=9.24;ReadPosRankSum=0.099;VQSLOD=0.2715;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,40:46:90.25:1018,90,0	1/1:9,0:10:20.72:77,21,0	0/0:16,0:11:21.71:0,22,204	0/0:12,0:9:1.74:0,2,109	1/1:19,0:21:40.55:149,41,0	1/1:17,0:18:40.17:155,40,0	1/1:11,0:15:34.20:142,34,0	1/1:23,0:24:49.38:169,49,0	0/0:14,0:14:39.13:0,39,503	1/1:16,0:18:37.24:141,37,0	1/1:20,0:20:41.54:148,42,0	1/1:10,0:10:22.86:81,23,0	1/1:12,0:12:25.31:82,25,0	1/1:11,0:11:20.93:75,21,0	1/1:11,0:14:33.95:160,34,0	1/1:10,0:10:22.20:73,22,0	0/0:32,0:32:89.04:0,89,1093	0/0:16,0:16:45.14:0,45,569	1/1:12,0:12:27.41:94,27,0	1/1:22,0:22:48.02:163,48,0	1/1:7,0:7:14.05:47,14,0	1/1:21,0:21:42.46:151,42,0	1/1:8,0:8:13.47:44,13,0	1/1:7,0:7:9.96:32,10,0	1/1:24,0:25:48.53:169,49,0	1/1:14,0:15:35.08:128,35,0	1/1:19,0:19:39:133,39,0	1/1:10,0:10:11.10:37,11,0
chr10	29072589	.	TCTC	T	15173.33	PASS	AB=1.000;AC=45;AF=0.804;AN=56;BaseQRankSum=11.787;DP=474;FS=1.358;HRun=0;HaplotypeScore=149.1459;InbreedingCoeff=0.9126;MQ=59.81;MQ0=0;MQRankSum=-13.556;QD=42.74;ReadPosRankSum=0.886;VQSLOD=6.2970;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:87.28:0,87,1960	1/1:2,7:9:21.07:357,21,0	0/0:16,0:11:27.56:0,28,507	0/1:10,0:8:3.31:3,0,182	1/1:2,22:24:63.21:1035,63,0	1/1:1,20:21:54.18:908,54,0	1/1:2,16:18:45.15:766,45,0	1/1:2,21:23:63.20:1045,63,0	0/0:13,0:13:36.12:0,36,830	1/1:2,16:18:48.16:818,48,0	1/1:1,20:21:60.09:956,60,0	1/1:0,12:12:33.11:551,33,0	1/1:0,12:12:30.10:511,30,0	1/1:0,9:9:27.09:460,27,0	1/1:0,17:17:45.15:755,45,0	1/1:1,12:13:30.10:511,30,0	0/0:32,0:32:90.31:0,90,2075	0/0:19,0:19:57.15:0,57,1248	1/1:3,16:19:42.13:682,42,0	1/1:2,22:24:66.23:1122,66,0	1/1:1,6:7:15.05:255,15,0	1/1:2,17:19:48.16:817,48,0	1/1:2,6:8:21.07:358,21,0	1/1:0,8:8:15.05:256,15,0	1/1:0,23:23:66.23:1123,66,0	1/1:1,16:17:48.16:814,48,0	1/1:1,17:18:48.16:816,48,0	1/1:0,5:5:15.05:255,15,0
chr10	29073280	.	GA	G	20147.35	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=9.240;DP=720;FS=5.940;HRun=1;HaplotypeScore=75.7963;InbreedingCoeff=0.9967;MQ=91.67;MQ0=0;MQRankSum=-4.903;QD=37.52;ReadPosRankSum=4.389;VQSLOD=5.3982;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:56:99:0,165,2599	1/1:0,10:10:30.10:419,30,0	0/0:30,0:30:86.46:0,86,1244	0/0:29,0:29:78.24:0,78,1189	1/1:0,26:26:69.19:943,69,0	1/1:0,24:24:66.22:923,66,0	1/1:0,32:32:87.29:1217,87,0	1/1:0,25:25:75.22:1015,75,0	0/0:24,0:24:72.23:0,72,1128	1/1:0,23:23:69.23:961,69,0	1/1:0,23:23:60.20:839,60,0	1/1:0,28:28:75.25:1049,75,0	1/1:0,26:26:69.23:964,69,0	1/1:0,31:31:78.26:1086,78,0	1/1:0,29:29:72.24:998,72,0	1/1:0,28:28:72.24:1007,72,0	0/0:28,0:28:84.29:0,84,1342	0/0:16,0:16:48.16:0,48,764	1/1:0,12:12:36.12:503,36,0	1/1:0,26:26:75.21:1024,75,0	1/1:1,45:46:99:1717,123,0	1/1:0,18:18:42.14:573,42,0	1/1:0,18:18:51.17:713,51,0	1/1:0,29:29:81.27:1133,81,0	1/1:1,24:25:60.20:837,60,0	1/1:0,26:26:78.22:1053,78,0	1/1:0,26:26:69.23:965,69,0	1/1:0,6:6:15.05:210,15,0
chr10	29073617	.	G	GAA	1528.05	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.705;DP=618;FS=1.456;HRun=6;HaplotypeScore=101.3681;InbreedingCoeff=0.9597;MQ=71.60;MQ0=1;MQRankSum=-1.741;QD=39.18;ReadPosRankSum=1.873;VQSLOD=2.8774;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,35:39:96.33:1623,96,0	0/0:4,0:4:12.02:0,12,133	0/0:12,0:12:23.89:0,24,260	0/0:13,0:12:30.04:0,30,329	0/0:28,0:28:75.21:0,75,900	0/0:22,0:22:60.17:0,60,719	0/0:27,0:27:78.24:0,78,949	0/0:27,0:27:69.21:0,69,842	0/0:16,0:16:39.11:0,39,475	0/0:20,0:20:48.13:0,48,577	0/0:22,0:22:51.16:0,51,621	0/0:20,0:20:48.12:0,48,561	0/0:25,0:25:60.16:0,60,719	0/0:25,0:25:57.07:0,57,664	0/0:19,0:19:54.17:0,54,658	0/0:19,0:19:45.11:0,45,534	0/0:36,0:36:99:0,102,1229	0/0:10,0:10:30.09:0,30,366	0/0:27,0:27:69.16:0,69,796	0/0:22,0:22:54.10:0,54,640	0/0:23,0:23:60.18:0,60,731	0/0:20,0:20:54.15:0,54,644	0/0:30,0:30:75.23:0,75,915	0/0:22,0:22:63.20:0,63,769	0/0:24,0:24:66.19:0,66,791	0/0:33,0:33:90.26:0,90,1086	0/0:27,0:27:66.18:0,66,793	0/0:6,0:6:18.06:0,18,219
chr10	29073682	.	ACC	A	19402.62	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=11.925;DP=596;FS=5.140;HRun=3;HaplotypeScore=119.7189;InbreedingCoeff=0.9379;MQ=69.77;MQ0=0;MQRankSum=-2.253;QD=41.82;ReadPosRankSum=1.303;VQSLOD=4.3197;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,123,2256	1/1:0,5:5:15.05:230,15,0	0/0:10,0:10:9.41:0,9,378	0/0:10,0:10:15.07:0,15,365	1/1:0,26:26:78.18:1131,78,0	1/1:0,23:23:69.23:1056,69,0	1/1:0,30:30:87.30:1332,87,0	1/1:0,21:21:63.20:917,63,0	0/0:17,0:17:48.15:0,48,895	1/1:0,25:25:72.24:1099,72,0	1/1:1,16:17:48.16:734,48,0	1/1:1,29:30:84.28:1275,84,0	1/1:0,21:21:60.20:918,60,0	1/1:1,18:19:45.15:688,45,0	1/1:0,26:26:72.24:1102,72,0	1/1:1,20:21:2.24:814,2,0	0/0:36,0:36:99:0,108,2033	0/0:17,0:17:51.17:0,51,959	1/1:1,19:20:54.13:744,54,0	1/1:1,24:25:66.14:981,66,0	1/1:0,15:15:39.13:588,39,0	1/1:0,21:21:60.12:858,60,0	1/1:1,18:19:54.14:796,54,0	1/1:1,26:27:69.23:1056,69,0	1/1:0,13:13:36.12:540,36,0	1/1:1,31:32:93.29:1374,93,0	1/1:0,23:23:66.22:1010,66,0	1/1:1,4:5:12:158,12,0
chr10	29074410	.	A	ATATATATATATGTATACATATGTATACG	295.77	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=-0.030;DP=339;FS=0.000;HRun=0;HaplotypeScore=211.7730;InbreedingCoeff=0.4069;MQ=72.04;MQ0=1;MQRankSum=0.004;QD=8.96;ReadPosRankSum=-0.993;VQSLOD=2.1288;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,4:21:3.01:373,3,0	0/0:6,0:6:15.05:0,15,867	0/0:9,0:8:14.59:0,15,363	0/1:12,0:7:0.03:0,0,23	0/0:20,0:20:60.21:0,60,2848	0/0:13,0:13:36.11:0,36,1944	0/0:9,0:9:24.08:0,24,1036	0/0:49,0:49:99:0,129,4967	0/0:9,0:9:27.09:0,27,1447	0/0:15,0:15:42.14:0,42,1794	0/0:14,0:14:42.14:0,42,2331	0/0:10,0:10:30.10:0,30,1872	0/0:7,0:7:21.07:0,21,939	0/0:11,0:11:24.08:0,24,1470	0/0:3,0:3:9.03:0,9,565	0/0:6,0:6:15.04:0,15,785	0/0:18,0:18:54.18:0,54,2622	0/0:13,0:13:36.12:0,36,2007	0/0:16,0:16:42.11:0,42,1742	0/0:10,0:10:30.09:0,30,1708	0/0:2,0:2:6.02:0,6,102	0/0:3,0:3:9.03:0,9,407	0/0:8,0:8:24.08:0,24,1299	0/0:2,0:2:3.01:0,3,78	0/0:15,0:15:42.14:0,42,2603	0/0:11,0:11:33.11:0,33,2347	0/0:13,0:13:36.10:0,36,2064	0/0:14,0:14:36.12:0,36,2304
chr10	29077416	.	AGAAGGAAGGAAGGAAG	A	10730.68	PASS	AB=1.000;AC=46;AF=0.885;AN=52;BaseQRankSum=-1.235;DP=627;FS=0.000;HRun=0;HaplotypeScore=262.3982;InbreedingCoeff=0.2038;MQ=49.99;MQ0=1;MQRankSum=1.426;QD=19.09;ReadPosRankSum=3.838;VQSLOD=3.3587;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:36,0:36:99:390,0,195	1/1:6,3:9:12.04:489,12,0	0/0:16,0:11:0.47:0,0,1	./.	1/1:10,8:18:11.84:236,12,0	1/1:8,10:18:9.03:295,9,0	0/1:27,0:27:45.23:185,0,45	1/1:18,14:32:42.04:487,42,0	1/1:15,17:32:18.02:675,18,0	1/1:22,10:32:27.08:726,27,0	1/1:8,9:17:14.96:278,15,0	1/1:20,16:36:18.06:732,18,0	1/1:13,13:26:15.05:627,15,0	1/1:9,13:22:15.05:482,15,0	1/1:8,14:22:6.02:245,6,0	1/1:17,15:32:15.05:625,15,0	1/1:19,11:30:12.02:364,12,0	1/1:17,9:26:9.03:268,9,0	1/1:8,10:18:30.08:873,30,0	1/1:6,11:17:21.02:537,21,0	1/1:27,0:27:8.04:137,8,0	1/1:11,8:19:8.99:189,9,0	1/1:14,1:15:5.69:103,6,0	0/0:24,7:31:1.55:0,2,4	1/1:9,5:14:6.02:243,6,0	1/1:10,15:25:45.15:1123,45,0	1/1:12,0:12:15.05:422,15,0	./.
chr10	29077753	.	A	AAC	419.92	PASS	AB=0.949;AC=23;AF=0.479;AN=48;BaseQRankSum=-0.835;DP=553;FS=0.000;HRun=0;HaplotypeScore=94.0858;InbreedingCoeff=0.2016;MQ=68.84;MQ0=12;MQRankSum=1.257;QD=1.56;ReadPosRankSum=0.927;VQSLOD=1.3226;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:25:11.98:111,12,0	1/1:6,2:8:3.01:43,3,0	./.	./.	1/1:16,0:16:8.75:52,9,0	0/1:16,0:23:0.03:0,0,0	0/0:23,0:23:14.26:0,14,63	./.	0/0:24,0:24:3.21:0,3,15	0/1:18,0:17:16.92:47,0,17	./.	0/0:8,0:13:2.65:0,3,11	0/0:11,0:12:2.84:0,3,14	0/1:20,0:20:5.10:5,0,8	1/1:10,2:12:3:43,3,0	0/1:21,0:21:13.94:14,0,54	0/0:20,0:20:3.31:0,3,15	1/1:11,0:11:2.34:8,2,0	0/0:20,0:20:0.89:0,1,2	0/1:16,0:16:0:0,0,0	0/0:47,0:47:15.61:0,16,141	0/0:14,0:16:2.84:0,3,14	1/1:17,3:19:2.52:17,3,0	0/1:21,10:33:20.21:76,0,20	0/0:21,0:21:2.98:0,3,25	1/1:20,0:20:6.38:58,6,0	1/1:13,0:12:2.99:23,3,0	0/1:9,1:8:8.61:58,0,9
chr10	29079585	.	A	AGGT	2075.15	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-5.282;DP=624;FS=1.498;HRun=0;HaplotypeScore=85.6965;InbreedingCoeff=0.9605;MQ=74.86;MQ0=0;MQRankSum=-3.755;QD=50.61;ReadPosRankSum=-1.376;VQSLOD=5.5204;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,39:41:96.33:2170,96,0	0/0:6,0:6:15.05:0,15,256	0/0:11,0:11:15.05:0,15,299	0/0:11,0:11:17.72:0,18,231	0/0:16,0:16:45.15:0,45,761	0/0:14,0:14:39.13:0,39,665	0/0:37,0:37:99:0,111,1893	0/0:22,0:22:63.21:0,63,1038	0/0:18,0:18:54.18:0,54,913	0/0:23,0:23:69.24:0,69,1171	0/0:17,0:17:48.14:0,48,766	0/0:33,0:33:99:0,99,1682	0/0:25,0:25:75.26:0,75,1278	0/0:36,0:36:99:0,108,1809	0/0:26,0:26:78.27:0,78,1327	0/0:27,0:27:75.26:0,75,1274	0/0:31,0:31:90.31:0,90,1535	0/0:19,0:19:57.19:0,57,966	0/0:18,0:18:48.16:0,48,788	0/0:19,0:19:51.16:0,51,836	0/0:32,0:32:81.28:0,81,1370	0/0:17,0:17:48.15:0,48,792	0/0:10,0:10:30.10:0,30,507	0/0:25,0:25:75.21:0,75,1248	0/0:14,0:14:39.13:0,39,665	0/0:30,0:30:90.31:0,90,1523	0/0:35,0:35:99:0,102,1675	0/0:11,0:11:33.11:0,33,563
chr10	29081366	.	T	TAC	3099.43	PASS	AB=0.859;AC=27;AF=0.519;AN=52;BaseQRankSum=-4.955;DP=545;FS=0.000;HRun=0;HaplotypeScore=106.6869;InbreedingCoeff=-0.2771;MQ=59.24;MQ0=15;MQRankSum=1.932;QD=7.49;ReadPosRankSum=-1.329;VQSLOD=2.6950;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:17.76:0,18,162	1/1:8,1:9:13.77:135,14,0	./.	./.	0/1:16,2:18:63.88:113,0,64	0/1:23,3:26:12.98:253,0,13	0/0:14,0:20:5.68:0,6,28	0/1:21,0:17:23.08:51,0,23	0/0:17,0:25:25.85:0,26,160	0/1:14,7:21:7.98:261,0,8	0/1:10,3:14:26.23:35,0,26	0/1:9,8:17:20.02:80,0,20	0/1:17,2:20:3.16:226,0,3	0/1:10,7:18:10.39:244,0,10	0/1:12,13:26:14.20:186,0,14	1/1:25,2:28:10.87:344,11,0	0/0:9,0:15:11.32:0,11,55	0/1:8,0:9:4.61:5,0,34	0/1:16,2:18:23.19:79,0,23	0/1:18,0:18:0.02:121,0,0	1/1:30,3:30:7.22:192,7,0	1/1:12,4:15:3.01:44,3,0	1/1:10,0:10:3.01:44,3,0	0/1:16,10:26:28.58:200,0,29	0/1:20,2:22:33.96:234,0,34	0/1:19,2:21:3.96:194,0,4	0/1:16,1:14:42.56:158,0,43	0/1:5,0:5:47.62:54,0,48
chr10	29081428	.	ATCTC	A	94.05	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=3.942;DP=566;FS=2.813;HRun=0;HaplotypeScore=137.7761;InbreedingCoeff=0.6339;MQ=64.04;MQ0=8;MQRankSum=-1.035;QD=1.68;ReadPosRankSum=-2.738;VQSLOD=2.0303;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:7,7:14:19.70:176,20,0	0/0:9,0:9:24.08:0,24,571	0/0:40,0:13:15.16:0,15,426	0/1:42,0:20:22.26:22,0,233	0/0:22,0:22:51.62:0,52,1184	0/0:23,0:23:47.17:0,47,1073	0/0:19,0:19:45.15:0,45,1065	0/0:16,0:15:33.10:0,33,713	0/0:20,0:20:45.62:0,46,1056	0/0:20,0:20:51.16:0,51,1113	0/0:12,0:12:27.07:0,27,497	0/0:21,0:21:54.19:0,54,1337	0/0:26,0:26:78.24:0,78,1842	0/0:14,0:14:39.12:0,39,860	0/0:21,0:21:42.14:0,42,956	0/0:16,0:15:36.10:0,36,768	0/0:21,0:21:51.16:0,51,1123	0/0:12,0:12:33.11:0,33,807	0/0:12,0:12:27.05:0,27,588	0/0:21,0:21:45.12:0,45,992	0/0:30,0:30:81.69:0,82,1649	0/0:13,0:11:24.08:0,24,593	0/0:13,0:13:36.12:0,36,922	0/0:35,0:35:87.14:0,87,2029	0/0:26,0:26:57.17:0,57,1333	0/0:19,0:19:50.84:0,51,1122	0/0:17,0:16:36.10:0,36,780	0/0:12,0:12:33.11:0,33,777
chr10	29081511	.	AGAGAGAGG	A	2666.34	PASS	AB=0.982;AC=27;AF=0.482;AN=56;BaseQRankSum=-4.663;DP=679;FS=0.442;HRun=0;HaplotypeScore=173.8255;InbreedingCoeff=-0.4940;MQ=50.39;MQ0=30;MQRankSum=0.419;QD=5.38;ReadPosRankSum=-4.009;VQSLOD=1.5879;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:20:3.84:4,0,320	0/1:14,0:14:16.47:16,0,30	0/0:58,0:7:16.45:0,16,114	0/0:76,0:15:23.47:0,23,238	1/1:22,2:22:8.91:208,9,0	0/1:34,2:35:15.64:128,0,16	0/1:15,1:16:49.71:85,0,50	0/1:26,0:22:16.67:328,0,17	0/1:23,0:22:80.64:81,0,708	0/1:19,0:18:36.77:199,0,37	0/1:22,0:21:25.64:26,0,46	0/0:20,0:18:13.80:0,14,98	1/1:14,0:12:15.49:223,15,0	0/1:17,1:18:31.71:103,0,32	0/1:22,1:22:99:137,0,109	0/1:21,0:20:9.22:9,0,52	0/1:17,0:16:99:119,0,452	0/1:13,0:12:34.98:35,0,420	0/1:16,1:17:62.05:324,0,62	0/1:23,0:21:67.56:117,0,68	0/1:13,0:13:49.75:97,0,50	0/1:26,1:26:11.68:62,0,12	0/1:19,0:18:6.55:7,0,53	0/0:28,0:28:11.36:0,11,57	1/1:18,0:18:4.05:13,4,0	0/1:22,2:23:64.70:340,0,65	0/1:29,0:27:23.95:24,0,110	0/1:18,0:17:61.08:144,0,61
chr10	29081513	.	AGAGAGG	A	4759.27	PASS	AB=0.977;AC=45;AF=0.804;AN=56;BaseQRankSum=-4.099;DP=680;FS=3.544;HRun=0;HaplotypeScore=153.4423;InbreedingCoeff=0.2394;MQ=50.25;MQ0=30;MQRankSum=2.987;QD=8.83;ReadPosRankSum=-0.386;VQSLOD=3.7795;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:20:0.40:0,0,275	1/1:9,2:11:8.68:120,9,0	0/0:59,0:8:19.45:0,19,147	0/0:78,0:15:17.72:0,18,223	1/1:24,0:22:28.54:224,29,0	1/1:35,1:35:9.29:179,9,0	1/1:16,0:16:14.04:120,14,0	1/1:26,0:22:48.91:454,49,0	0/1:23,0:22:99:106,0,447	1/1:16,1:16:29.60:285,30,0	1/1:21,1:21:9.58:83,10,0	1/1:18,2:18:14.39:121,14,0	1/1:13,1:12:29.73:283,30,0	1/1:16,2:18:35.74:312,36,0	1/1:23,1:23:39.19:303,39,0	1/1:20,1:20:13.72:115,14,0	0/1:17,0:16:99:120,0,311	0/1:14,0:13:57.81:58,0,278	1/1:17,1:18:4.97:439,5,0	1/1:23,1:22:35.77:291,36,0	0/1:12,1:13:4.35:105,0,4	1/1:25,1:25:15.04:71,15,0	1/1:16,1:16:3.48:14,3,0	1/1:29,0:29:10.98:47,11,0	1/1:17,1:18:5.81:51,6,0	1/1:22,2:23:10.69:494,11,0	0/1:26,1:25:1.96:175,0,2	0/1:17,1:17:26.84:193,0,27
chr10	29081515	.	AGAGG	A	7058.40	PASS	AB=0.897;AC=47;AF=0.839;AN=56;BaseQRankSum=-5.517;DP=683;FS=4.039;HRun=0;HaplotypeScore=133.6303;InbreedingCoeff=0.5181;MQ=50.00;MQ0=31;MQRankSum=3.543;QD=13.81;ReadPosRankSum=-0.489;VQSLOD=4.5268;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:20:12.92:0,13,221	1/1:3,8:11:8.88:112,9,0	0/0:66,0:9:19.11:0,19,147	0/0:82,0:16:15.15:0,15,186	1/1:20,4:22:33.28:281,33,0	1/1:7,28:34:26.66:307,27,0	1/1:4,11:15:15.03:227,15,0	1/1:26,0:22:57.84:503,58,0	0/1:23,1:23:99:110,0,220	1/1:15,2:16:39.04:437,39,0	1/1:5,15:19:11.92:129,12,0	1/1:6,14:18:14.76:164,15,0	1/1:13,1:12:30.02:328,30,0	1/1:14,4:18:41.92:466,42,0	1/1:21,2:22:41.65:439,42,0	1/1:3,18:20:15.04:262,15,0	0/1:15,3:17:99:144,0,126	0/1:12,2:13:69.13:69,0,98	1/1:16,1:17:41.51:468,42,0	1/1:22,2:22:47.94:459,48,0	1/1:13,1:14:21.33:196,21,0	1/1:6,20:25:17.74:235,18,0	1/1:7,10:16:6.02:93,6,0	1/1:4,23:27:12.04:228,12,0	1/1:1,18:19:5.95:56,6,0	1/1:21,3:23:51.07:571,51,0	1/1:5,21:25:27.53:427,28,0	1/1:16,1:16:21.14:348,21,0
chr10	29081517	.	AGG	A	5875.28	PASS	AB=1.000;AC=49;AF=0.875;AN=56;BaseQRankSum=-3.780;DP=677;FS=1.535;HRun=3;HaplotypeScore=127.0316;InbreedingCoeff=0.6756;MQ=50.02;MQ0=30;MQRankSum=3.355;QD=11.73;ReadPosRankSum=-0.441;VQSLOD=1.4821;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,2:19:17.22:0,17,174	1/1:10,0:10:8.92:65,9,0	0/0:70,0:10:15.68:0,16,140	0/0:85,0:15:18.44:0,18,190	1/1:22,1:22:33.19:268,33,0	1/1:33,0:33:26:187,26,0	1/1:14,0:15:14.99:146,15,0	1/1:28,0:25:67.44:576,67,0	0/1:24,0:23:4.99:178,0,5	1/1:17,0:16:47.99:432,48,0	1/1:19,0:18:11.87:85,12,0	1/1:18,1:17:14.95:138,15,0	1/1:13,1:12:32.96:275,33,0	1/1:16,1:17:41.79:343,42,0	1/1:22,1:22:41.74:350,42,0	1/1:19,0:19:14.95:117,15,0	1/1:16,2:17:0.04:215,0,0	1/1:12,1:13:6.72:178,7,0	1/1:16,2:18:44.99:403,45,0	1/1:23,1:22:50.90:419,51,0	1/1:13,1:14:23.83:208,24,0	1/1:24,2:25:17.82:130,18,0	1/1:13,1:13:5.87:43,6,0	1/1:25,1:26:11.97:96,12,0	1/1:19,0:19:5.88:36,6,0	1/1:24,0:23:53.94:465,54,0	1/1:24,2:25:29.61:261,30,0	1/1:14,1:14:26.59:260,27,0
chr10	29082072	.	A	AT	656.35	PASS	AC=20;AF=0.833;AN=24;BaseQRankSum=-3.107;DP=41;FS=18.451;HRun=0;HaplotypeScore=28.1258;InbreedingCoeff=0.3476;MQ=91.09;MQ0=2;MQRankSum=-3.107;QD=34.54;ReadPosRankSum=1.234;VQSLOD=1.7262;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,3:3:9.03:117,9,0	./.	0/0:6,0:2:5.84:0,6,39	0/0:10,0:4:3.48:0,3,35	1/1:0,2:2:6.02:93,6,0	1/1:0,3:2:6.02:92,6,0	./.	./.	1/1:0,2:2:5.60:39,6,0	./.	1/1:0,1:1:3.01:46,3,0	./.	./.	./.	./.	1/1:0,1:1:3.01:47,3,0	./.	./.	./.	./.	./.	./.	1/1:0,1:1:3.01:46,3,0	./.	1/1:0,2:2:6.02:93,6,0	1/1:0,3:3:9.03:133,9,0	./.	1/1:0,1:1:3.01:44,3,0
chr10	29085117	.	ACTTT	A	387.01	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=5.448;DP=518;FS=2.411;HRun=0;HaplotypeScore=79.9173;InbreedingCoeff=0.5804;MQ=67.29;MQ0=1;MQRankSum=-1.215;QD=11.38;ReadPosRankSum=1.135;VQSLOD=3.0247;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:9,8:17:32.98:480,33,0	0/0:8,0:8:12.04:0,12,284	0/0:9,0:6:8.22:0,8,95	0/0:9,0:9:6.02:0,6,99	0/0:23,0:23:54.15:0,54,1231	0/0:29,0:28:69.22:0,69,1592	0/0:15,0:15:30.09:0,30,668	0/0:35,0:35:48.14:0,48,960	0/0:17,0:17:36.10:0,36,769	0/0:25,0:24:51.17:0,51,1220	0/0:16,0:16:42.12:0,42,936	0/0:14,0:14:30.10:0,30,699	0/0:21,0:21:48.15:0,48,1108	0/0:13,0:13:30.10:0,30,709	0/0:17,0:17:45.12:0,45,973	0/1:17,0:17:5.73:6,0,480	0/0:15,0:15:36.12:0,36,805	0/0:20,0:20:36.06:0,36,663	0/0:15,0:15:21.05:0,21,413	0/0:21,0:21:51.17:0,51,1227	0/0:15,0:15:30.02:0,30,521	0/0:15,0:15:36.11:0,36,793	0/0:19,0:19:40.38:0,40,976	0/0:16,0:16:39.13:0,39,942	0/0:15,0:15:33.11:0,33,797	0/0:35,0:35:87.27:0,87,2034	0/0:32,0:32:69.03:0,69,1454	0/0:15,0:13:9.01:0,9,176
chr10	29085454	.	AT	A	13225.20	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=8.212;DP=712;FS=18.075;HRun=9;HaplotypeScore=73.1339;InbreedingCoeff=0.9921;MQ=66.24;MQ0=0;MQRankSum=1.453;QD=22.80;ReadPosRankSum=2.123;VQSLOD=3.8364;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:71.93:0,72,798	1/1:2,7:9:24:215,24,0	0/0:7,0:7:12.04:0,12,138	0/0:12,0:11:24.96:0,25,279	1/1:1,29:30:72.01:658,72,0	1/1:4,28:33:89.06:796,89,0	1/1:2,19:21:60.01:544,60,0	1/1:9,30:39:84.01:763,84,0	0/0:23,0:24:53.98:0,54,595	1/1:4,31:35:87.03:796,87,0	1/1:3,26:30:72.02:659,72,0	1/1:6,19:25:60.03:548,60,0	1/1:2,24:26:34.42:569,34,0	1/1:3,22:25:63.03:577,63,0	1/1:4,27:31:84.04:768,84,0	1/1:1,22:23:60.03:549,60,0	0/0:31,0:31:90.27:0,90,1039	0/0:30,0:30:79.47:0,79,892	1/1:6,16:22:45.01:412,45,0	1/1:6,23:29:69.03:631,69,0	1/1:5,16:21:53.94:484,54,0	1/1:3,26:29:43.42:652,43,0	1/1:1,25:26:68.78:631,69,0	1/1:2,28:30:90.05:823,90,0	1/1:3,21:23:60.03:549,60,0	1/1:5,37:42:76.41:948,76,0	1/1:6,13:19:51:461,51,0	1/1:4,7:11:21.01:192,21,0
chr10	29086538	.	TTCTC	T	2650.19	PASS	AB=0.834;AC=38;AF=0.760;AN=50;BaseQRankSum=1.745;DP=609;FS=5.385;HRun=0;HaplotypeScore=108.9159;InbreedingCoeff=0.2355;MQ=66.14;MQ0=15;MQRankSum=-0.290;QD=6.24;ReadPosRankSum=1.077;VQSLOD=1.5355;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:23:24.06:0,24,469	./.	./.	0/0:52,0:21:0:0,0,0	1/1:20,1:21:6.48:93,6,0	1/1:17,7:23:3.56:88,4,0	1/1:14,9:22:11.57:185,12,0	0/0:27,0:26:0.47:0,0,1	1/1:8,0:19:26.82:250,27,0	0/1:22,0:27:13.79:43,0,14	1/1:15,0:15:6.02:92,6,0	0/1:11,1:16:16.21:38,0,16	0/1:15,2:20:34.81:35,0,37	1/1:11,5:18:12.03:148,12,0	1/1:19,11:31:30.10:445,30,0	1/1:18,6:25:27.08:398,27,0	./.	1/1:4,0:7:6.01:56,6,0	1/1:19,3:21:9:94,9,0	1/1:25,0:25:3.48:47,3,0	1/1:17,0:17:8.98:73,9,0	1/1:16,2:19:3.01:46,3,0	1/1:15,5:20:9.97:140,10,0	1/1:10,10:22:24.08:370,24,0	1/1:12,3:16:9.02:113,9,0	0/0:23,0:23:7.77:0,8,50	0/1:24,0:26:26.09:26,0,40	1/1:12,0:11:1.97:7,2,0
chr10	29087679	.	G	GGT	2840.56	PASS	AB=0.849;AC=27;AF=0.500;AN=54;BaseQRankSum=-5.631;DP=584;FS=4.595;HRun=0;HaplotypeScore=102.9688;InbreedingCoeff=-0.4330;MQ=68.76;MQ0=18;MQRankSum=1.349;QD=5.92;ReadPosRankSum=0.892;VQSLOD=2.7707;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:34,0:33:5.24:41,5,0	0/1:5,1:6:26.49:39,0,26	1/1:38,0:21:0.47:1,0,0	./.	1/1:17,4:22:8.59:305,9,0	0/1:18,0:19:16.43:16,0,36	0/1:17,3:21:25.40:201,0,25	0/0:19,0:18:4.74:0,5,60	0/0:11,0:17:28.36:0,28,139	0/1:17,1:20:25.21:25,0,161	0/0:15,0:14:12.03:0,12,130	0/1:20,1:22:23.62:109,0,24	0/1:15,1:15:17.78:119,0,18	0/1:7,3:10:52.99:77,0,53	0/1:13,7:20:31.98:325,0,32	0/1:10,10:20:2.41:371,0,2	0/1:21,0:34:0.74:1,0,129	0/1:11,0:14:27.40:36,0,27	0/1:8,1:12:10.81:77,0,11	0/1:11,6:17:23.48:80,0,23	0/1:18,3:22:66.39:66,0,79	0/1:9,10:19:27.92:257,0,28	0/1:12,6:18:21.77:202,0,22	0/1:22,10:32:69.54:278,0,70	0/0:16,1:18:22.39:0,22,224	0/1:24,0:24:6.82:40,0,7	0/1:14,6:21:46.97:160,0,47	1/1:8,5:13:0.90:164,1,0
chr10	29088914	.	C	CG	417.22	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=0.179;DP=512;FS=0.969;HRun=1;HaplotypeScore=91.3485;InbreedingCoeff=0.7838;MQ=51.18;MQ0=25;MQRankSum=-2.549;QD=10.98;ReadPosRankSum=-1.943;VQSLOD=0.9663;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,17:28:41.99:511,42,0	0/0:11,0:11:32.76:0,33,375	0/0:10,0:1:1.25:0,1,3	0/1:10,0:3:0.87:6,0,1	0/0:30,0:28:57.16:0,57,709	0/0:19,0:19:51.12:0,51,604	0/0:16,0:13:33.01:0,33,387	0/0:17,0:15:42.11:0,42,520	0/0:11,0:11:27.03:0,27,316	0/0:15,0:14:39.12:0,39,495	0/0:23,0:22:48.12:0,48,580	0/0:16,0:16:30.08:0,30,363	0/0:22,0:22:54.07:0,54,643	0/0:17,0:17:39.13:0,39,503	0/0:23,0:22:54.11:0,54,650	0/0:22,0:22:47.88:0,48,610	0/0:20,0:20:42.14:0,42,542	0/0:15,0:15:39.11:0,39,487	0/0:20,0:17:45.07:0,45,549	0/0:15,0:15:36.11:0,36,453	0/0:17,0:16:39.13:0,39,505	0/0:17,0:17:42.08:0,42,502	0/0:25,0:24:63.03:0,63,749	0/0:14,0:13:36.08:0,36,436	0/0:26,0:26:66.14:0,66,793	0/0:19,0:19:54.09:0,54,657	0/0:20,0:20:57.16:0,57,694	0/0:14,0:13:36.12:0,36,465
chr10	29088927	.	CAAA	C	8898.92	PASS	AB=0.689;AC=48;AF=0.857;AN=56;BaseQRankSum=-9.031;DP=503;FS=11.787;HRun=14;HaplotypeScore=85.7333;InbreedingCoeff=0.4056;MQ=56.03;MQ0=10;MQRankSum=-2.014;QD=18.62;ReadPosRankSum=2.445;VQSLOD=2.6680;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,21:26:51.01:590,51,0	1/1:1,9:11:27:298,27,0	0/0:12,0:7:20.96:0,21,266	0/1:4,0:4:12.07:12,0,125	1/1:4,20:30:47.87:564,48,0	1/1:0,12:14:27.20:345,27,0	1/1:2,9:11:25.56:296,26,0	1/1:6,9:15:28.59:336,29,0	0/0:5,0:13:12.21:0,12,60	1/1:6,11:16:7.94:355,8,0	1/1:4,15:21:25.41:278,25,0	1/1:3,14:17:27.06:315,27,0	1/1:6,14:22:37.58:451,38,0	1/1:3,13:19:29.85:363,30,0	1/1:6,15:21:34.61:418,35,0	1/1:4,17:22:33.46:416,33,0	0/1:5,2:23:12.42:49,0,12	0/1:3,1:12:8.55:22,0,9	1/1:7,10:16:35.95:389,36,0	1/1:2,20:22:38.95:453,39,0	1/1:2,10:15:5.55:256,6,0	0/1:6,9:15:11.13:253,0,11	1/1:6,14:20:38.90:438,39,0	1/1:3,10:12:24.04:281,24,0	1/1:4,18:24:39.16:486,39,0	1/1:6,13:20:34.51:406,35,0	1/1:7,15:23:36.66:424,37,0	1/1:2,11:13:36.03:404,36,0
chr10	29101330	.	GAGAGGGAA	G	533.92	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=5.225;DP=568;FS=11.394;HRun=0;HaplotypeScore=128.5557;InbreedingCoeff=0.9083;MQ=69.90;MQ0=3;MQRankSum=-3.520;QD=7.31;ReadPosRankSum=0.044;VQSLOD=1.6369;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:6,17:23:9.03:111,9,0	0/0:8,0:8:24.07:0,24,662	0/0:35,0:25:18.92:0,19,329	0/0:39,0:29:36.37:0,36,553	0/0:35,0:34:89.95:0,90,2315	0/0:25,0:25:54.15:0,54,1567	0/0:21,0:21:54.13:0,54,1246	0/0:26,0:26:60.12:0,60,928	1/1:4,10:14:9.03:182,9,0	0/0:24,0:24:57.18:0,57,1691	0/0:15,0:15:33.10:0,33,839	0/0:12,0:12:27.07:0,27,484	0/0:24,0:24:54.14:0,54,1076	0/0:16,0:16:30.03:0,30,728	0/0:10,0:10:27.05:0,27,523	0/0:18,0:18:45.01:0,45,858	1/1:9,15:24:3.01:37,3,0	1/1:10,2:12:20.99:344,21,0	0/0:15,0:15:42.07:0,42,863	0/0:23,0:23:54.16:0,54,1373	0/0:25,0:25:48.10:0,48,1143	0/0:23,0:23:57.16:0,57,1413	0/0:12,0:12:30.09:0,30,742	0/0:17,0:17:39.04:0,39,634	0/0:19,0:19:51.03:0,51,1174	0/0:30,0:30:60.14:0,60,1411	0/0:12,0:12:24.07:0,24,594	0/0:9,0:9:25.61:0,26,564
chr10	29101366	.	GGA	G	221.20	PASS	AB=0.966;AC=10;AF=0.179;AN=56;BaseQRankSum=5.487;DP=527;FS=27.646;HRun=0;HaplotypeScore=60.4016;InbreedingCoeff=-0.1057;MQ=51.06;MQ0=44;MQRankSum=-4.279;QD=1.54;ReadPosRankSum=-2.054;VQSLOD=-0.3410;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:22,1:22:0.47:1,0,0	0/0:13,0:11:29.86:0,30,399	0/0:42,0:12:31:0,31,429	0/0:37,0:9:20.07:0,20,288	0/0:28,2:27:68.20:0,68,988	0/0:23,0:21:57.19:0,57,929	0/0:18,1:18:21.61:0,22,604	0/0:30,0:25:61.53:0,62,920	0/1:12,1:12:30.74:60,0,31	0/0:21,1:21:19.97:0,20,830	0/0:11,1:10:24.08:0,24,397	0/0:8,0:6:7.27:0,7,105	0/0:13,4:14:1.06:0,1,355	0/0:14,0:10:24.08:0,24,378	0/1:9,0:9:14.22:14,0,251	0/1:15,0:12:17.14:17,0,297	0/1:18,2:19:65.89:72,0,66	0/1:15,0:11:74.51:120,0,75	0/0:18,0:14:39:0,39,660	0/0:18,0:17:38.83:0,39,571	0/0:18,5:21:43.95:0,44,652	0/0:18,0:17:42.13:0,42,629	0/0:13,0:11:10.40:0,10,345	0/1:13,0:12:51.43:51,0,140	0/0:19,0:18:43.14:0,43,662	0/1:21,1:20:4.34:4,0,722	0/0:7,0:6:15.05:0,15,221	0/1:13,1:11:10.43:10,0,332
chr10	29101620	.	G	GA	1016.12	PASS	AB=0.921;AC=12;AF=0.214;AN=56;BaseQRankSum=-3.006;DP=635;FS=1.027;HRun=12;HaplotypeScore=80.4917;InbreedingCoeff=0.3268;MQ=69.98;MQ0=0;MQRankSum=1.711;QD=6.43;ReadPosRankSum=-1.415;VQSLOD=2.2106;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:29:45.27:0,45,130	0/1:6,1:7:17.24:17,0,54	0/0:25,0:21:12.53:0,13,205	0/0:21,0:17:1.43:0,1,47	0/0:35,2:37:13.02:0,13,415	0/0:14,0:16:15.16:0,15,228	0/0:12,0:12:32.81:0,33,241	0/0:36,1:38:25.45:0,25,332	1/1:13,4:17:17.80:294,18,0	0/0:31,0:31:50.49:0,50,367	0/1:15,0:15:2.66:3,0,110	0/0:26,0:26:59.20:0,59,429	0/0:26,0:28:58.46:0,58,390	0/1:20,0:20:39.09:39,0,234	0/0:34,1:36:50.15:0,50,514	0/0:26,0:26:65.57:0,66,481	1/1:5,19:25:32.01:459,32,0	1/1:4,17:21:10.24:319,10,0	0/0:17,1:22:4.45:0,4,237	0/0:25,2:27:23.67:0,24,341	0/0:16,0:16:23.76:0,24,227	0/0:19,0:19:38.74:0,39,282	0/0:13,2:15:6.52:0,7,211	0/1:10,3:15:27.43:27,0,134	0/0:22,1:24:32.28:0,32,382	0/1:23,3:26:6.48:6,0,239	0/0:23,2:25:21.41:0,21,314	0/1:11,1:11:8.31:8,0,110
chr10	29102463	.	A	ATGTG	687.33	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-2.681;DP=697;FS=0.000;HRun=0;HaplotypeScore=152.1998;InbreedingCoeff=0.9859;MQ=62.33;MQ0=3;MQRankSum=-0.617;QD=19.09;ReadPosRankSum=-2.802;VQSLOD=2.9446;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,28:36:25.33:781,25,0	0/0:11,0:11:33.01:0,33,337	0/0:18,0:13:26.68:0,27,302	0/0:14,0:13:23.16:0,23,249	0/0:32,0:32:72.07:0,72,797	0/0:26,0:26:57.06:0,57,626	0/0:24,0:24:68.94:0,69,651	0/0:36,0:34:63.21:0,63,658	0/0:22,0:22:42.09:0,42,475	0/0:27,0:27:71.06:0,71,668	0/0:28,0:28:59.95:0,60,582	0/0:30,0:30:75.10:0,75,1028	0/0:30,0:30:72.03:0,72,733	0/0:24,0:24:67.58:0,68,786	0/0:30,0:30:57.04:0,57,582	0/0:27,0:27:40.55:0,41,372	0/0:28,0:28:59.94:0,60,549	0/0:21,0:21:40.49:0,40,410	0/0:24,0:23:52.33:0,52,468	0/0:26,0:26:59.93:0,60,669	0/0:21,0:20:30.97:0,31,399	0/0:20,0:20:50.29:0,50,514	0/0:31,0:31:44.92:0,45,646	0/0:17,0:17:35.97:0,36,330	0/0:33,0:33:69.05:0,69,707	0/0:30,0:30:73.74:0,74,819	0/0:23,0:23:38.51:0,39,399	0/0:8,0:8:18.02:0,18,200
chr10	29102465	.	GTGTA	G	7942.24	PASS	AB=0.982;AC=44;AF=0.846;AN=52;BaseQRankSum=6.514;DP=690;FS=0.548;HRun=0;HaplotypeScore=122.1575;InbreedingCoeff=0.6867;MQ=62.33;MQ0=5;MQRankSum=-0.969;QD=13.81;ReadPosRankSum=2.222;VQSLOD=4.5262;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:24.81:0,25,528	1/1:6,5:11:15.05:232,15,0	./.	./.	1/1:12,20:32:48.16:744,48,0	1/1:10,16:26:30.10:446,30,0	0/1:26,1:27:13.37:13,0,522	1/1:29,5:32:8.91:61,9,0	1/1:4,0:22:33.04:307,33,0	1/1:14,14:28:36.07:481,36,0	1/1:15,13:28:24.08:372,24,0	0/0:29,0:29:57.18:0,57,1227	1/1:13,17:30:33.11:511,33,0	0/1:24,0:24:8.35:8,0,668	1/1:12,18:30:27.09:418,27,0	1/1:11,0:27:15.01:138,15,0	1/1:18,11:29:15.05:233,15,0	1/1:7,13:20:21.19:348,21,0	1/1:14,8:21:24.05:341,24,0	1/1:11,15:26:36.12:539,36,0	1/1:14,7:20:12.04:186,12,0	0/0:21,0:20:24.07:0,24,485	1/1:12,20:32:32.94:511,33,0	1/1:8,7:15:12.04:183,12,0	1/1:19,13:31:30.10:465,30,0	1/1:9,20:29:60.17:882,60,0	1/1:7,15:22:23.67:335,24,0	1/1:3,5:8:12.04:186,12,0
chr10	29103986	.	A	ATGTGTGTG	5653.74	PASS	AB=0.867;AC=44;AF=0.880;AN=50;BaseQRankSum=-1.801;DP=734;FS=2.881;HRun=0;HaplotypeScore=208.8928;InbreedingCoeff=-0.1612;MQ=58.73;MQ0=4;MQRankSum=-2.113;QD=8.23;ReadPosRankSum=-1.985;VQSLOD=3.8163;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:34:5.19:90,0,5	./.	./.	./.	1/1:25,1:25:9.32:88,9,0	1/1:26,0:26:14.73:77,15,0	1/1:29,0:29:21.02:338,21,0	1/1:33,0:31:17.51:103,18,0	0/1:19,0:27:20.90:121,0,21	1/1:12,11:34:42.32:917,42,0	1/1:5,6:15:2.99:24,3,0	1/1:21,0:36:8.87:67,9,0	1/1:20,11:36:13.89:192,14,0	1/1:12,0:30:3.01:89,3,0	1/1:30,0:29:21.43:193,21,0	0/1:20,0:32:3.72:156,0,4	0/1:21,0:25:37.54:92,0,38	0/1:16,0:18:16.47:140,0,16	1/1:27,0:26:33.96:593,34,0	1/1:14,0:14:8.94:108,9,0	1/1:46,0:44:25.15:183,25,0	0/1:22,0:22:5.05:103,0,5	1/1:13,0:13:8.67:61,9,0	1/1:30,0:30:2.99:23,3,0	1/1:20,0:19:17.94:115,18,0	1/1:32,0:32:53.11:1000,53,0	1/1:39,0:37:42.18:642,42,0	1/1:10,0:10:5.55:139,6,0
chr10	29104016	.	GTGTGTC	G	592.77	PASS	AB=0.994;AC=18;AF=0.321;AN=56;BaseQRankSum=4.049;DP=742;FS=59.484;HRun=0;HaplotypeScore=176.8123;InbreedingCoeff=-0.3848;MQ=43.32;MQ0=47;MQRankSum=1.221;QD=1.30;ReadPosRankSum=-0.983;VQSLOD=0.8546;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:40,5:44:99:184,0,173	0/0:5,0:5:8.91:0,9,66	0/0:42,0:1:2.98:0,3,22	0/0:44,0:8:17.14:0,17,115	0/1:28,0:26:5.91:6,0,86	0/0:27,0:27:0.99:0,1,247	0/1:25,0:23:33.36:33,0,303	0/1:38,0:29:2.78:3,0,445	0/1:27,0:26:45.97:46,0,318	0/1:35,0:31:83.87:84,0,825	0/0:12,0:10:6:0,6,84	0/1:23,0:23:1.29:1,0,34	0/0:29,0:28:10.28:0,10,284	0/0:24,0:24:20.86:0,21,204	0/1:35,0:34:23.29:23,0,422	0/0:22,0:22:0.11:0,0,395	0/1:28,0:24:69.25:69,0,320	0/1:21,0:20:85.07:94,0,85	0/1:23,0:18:76.22:76,0,368	0/1:13,0:13:7.30:7,0,144	0/1:52,0:48:24.85:25,0,259	0/1:12,0:11:6.98:7,0,252	1/1:7,0:7:5.68:32,6,0	0/0:31,0:30:26.59:0,27,200	0/0:19,0:17:2.19:0,2,55	0/0:31,0:26:0.88:0,1,840	0/1:36,0:35:11.05:11,0,535	0/1:8,0:8:33.12:33,0,70
chr10	29104022	.	C	CTG	1779.18	PASS	AB=0.997;AC=18;AF=0.321;AN=56;BaseQRankSum=8.772;DP=727;FS=41.785;HRun=0;HaplotypeScore=142.5269;InbreedingCoeff=0.2035;MQ=42.81;MQ0=50;MQRankSum=1.364;QD=5.58;ReadPosRankSum=0.068;VQSLOD=1.6063;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:41,1:41:13.66:14,0,127	0/0:4,0:4:9.03:0,9,111	0/0:43,0:1:3.01:0,3,38	0/0:45,0:7:17.72:0,18,188	0/1:27,0:25:11.60:12,0,122	0/0:30,0:30:34.97:0,35,410	0/0:25,0:23:14.22:0,14,300	0/0:38,0:29:48.04:0,48,681	1/1:14,11:24:42.14:668,42,0	0/0:31,0:27:0.08:0,0,476	0/0:14,0:12:5.61:0,6,48	0/0:18,0:18:13.51:0,14,108	0/0:29,0:28:23.88:0,24,443	0/0:23,0:23:21.07:0,21,264	0/1:33,0:32:31.59:32,0,495	0/1:20,0:20:2.12:2,0,211	1/1:24,7:26:40.74:595,41,0	1/1:19,2:20:18.29:347,18,0	0/1:20,0:16:29.84:30,0,201	0/0:11,0:11:12.40:0,12,122	0/0:52,0:47:50.87:0,51,587	0/0:12,0:11:11:0,11,89	1/1:6,0:6:2.37:8,2,0	0/0:32,0:31:36.92:0,37,427	0/1:17,0:15:45.53:49,0,46	0/1:33,0:26:71.38:71,0,165	0/1:36,0:35:46.06:46,0,443	1/1:8,0:8:0.80:73,1,0
chr10	29104042	.	CTG	C	1002.79	PASS	AB=0.778;AC=6;AF=0.107;AN=56;BaseQRankSum=7.557;DP=705;FS=2.192;HRun=0;HaplotypeScore=131.1816;InbreedingCoeff=0.5464;MQ=45.44;MQ0=49;MQRankSum=-0.634;QD=12.69;ReadPosRankSum=0.660;VQSLOD=3.6708;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:17.28:0,17,417	0/0:5,0:5:9.03:0,9,153	0/0:54,1:10:26.95:0,27,381	0/0:55,0:14:22.69:0,23,314	0/0:20,0:18:9.03:0,9,153	0/0:29,0:29:48.61:0,49,786	0/0:21,0:20:39.13:0,39,662	0/0:34,0:28:63.13:0,63,1021	1/1:6,14:19:30.10:385,30,0	0/0:27,0:23:48.13:0,48,767	0/0:16,0:12:14.88:0,15,228	0/1:16,0:16:16.43:16,0,186	0/0:29,0:28:31.04:0,31,756	0/0:28,0:28:48.16:0,48,806	0/0:30,0:29:57.18:0,57,943	0/0:21,0:21:31.20:0,31,508	1/1:7,16:20:30:383,30,0	0/1:4,16:20:4.26:353,0,4	0/0:23,0:19:39.03:0,39,571	0/0:14,0:14:24.03:0,24,364	0/0:49,0:44:77.93:0,78,1273	0/0:11,0:11:12.02:0,12,176	0/0:7,0:7:3.01:0,3,51	0/0:33,0:33:57.09:0,57,957	0/0:10,0:8:3.01:0,3,51	0/0:28,0:21:47.29:0,47,685	0/0:30,0:29:64.03:0,64,1009	0/0:8,0:8:5.46:0,5,135
chr10	29104437	.	AAC	A	220.13	PASS	AB=0.903;AC=15;AF=0.288;AN=52;BaseQRankSum=4.487;DP=343;FS=29.557;HRun=0;HaplotypeScore=100.4064;InbreedingCoeff=0.1036;MQ=33.49;MQ0=5;MQRankSum=-5.083;QD=1.33;ReadPosRankSum=3.306;VQSLOD=-0.0710;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:22:2.96:0,3,25	0/1:5,1:7:14.35:14,0,43	./.	./.	0/0:8,0:8:12.02:0,12,153	1/1:12,1:13:2.75:19,3,0	0/1:18,2:18:33.76:34,0,77	0/0:23,0:21:6.69:0,7,36	1/1:19,5:24:8.69:147,9,0	0/1:12,1:13:13.90:14,0,104	0/0:7,2:8:2.99:0,3,24	0/0:12,0:12:11.91:0,12,117	0/0:8,0:9:0.80:0,1,116	0/0:9,0:11:5.99:0,6,50	0/0:8,0:8:6.02:0,6,79	0/0:19,1:20:23.98:0,24,306	1/1:8,1:10:3.08:41,3,0	0/0:4,1:5:2.29:0,2,6	1/1:10,0:11:5.68:28,6,0	0/0:13,0:12:9.03:0,9,132	0/0:12,0:10:3:0,3,26	0/0:13,1:14:11.93:0,12,109	0/0:5,1:6:5.97:0,6,46	0/1:21,1:20:9.41:9,0,161	0/1:11,2:12:0:0,0,0	0/1:13,0:13:23.98:24,0,117	0/1:13,1:14:29.83:30,0,152	0/0:2,0:2:3.01:0,3,44
chr10	29104475	.	C	CAGAGAGAG	475.70	PASS	AB=0.971;AC=4;AF=0.071;AN=56;BaseQRankSum=7.199;DP=600;FS=39.308;HRun=0;HaplotypeScore=206.9716;InbreedingCoeff=0.3495;MQ=46.04;MQ0=20;MQRankSum=-6.422;QD=9.91;ReadPosRankSum=-1.717;VQSLOD=1.4451;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:21:5.94:0,6,173	0/0:7,0:7:8.40:0,8,289	0/0:8,0:6:15.04:0,15,316	0/0:17,0:10:15.77:0,16,336	0/0:27,0:25:42.13:0,42,1121	0/0:23,0:22:21.03:0,21,468	0/0:31,0:28:31.86:0,32,900	0/0:24,0:19:54.15:0,54,1131	1/1:12,10:25:13.35:415,13,0	0/0:32,0:30:83.63:0,84,2020	0/0:19,0:17:21.07:0,21,592	0/0:20,0:19:27.09:0,27,712	0/0:18,0:18:39.59:0,40,958	0/0:25,0:24:18.06:0,18,367	0/0:26,0:26:30.57:0,31,867	0/0:25,0:25:42.14:0,42,1205	0/1:15,0:16:25.37:25,0,56	0/1:7,0:7:43.37:146,0,43	0/0:16,0:16:39.10:0,39,894	0/0:26,0:24:22.13:0,22,993	0/0:28,0:23:44.93:0,45,1059	0/0:19,0:19:30.10:0,30,868	0/0:20,0:20:45.14:0,45,1198	0/0:37,0:35:50.85:0,51,1439	0/0:21,0:20:3.04:0,3,428	0/0:26,0:25:45.88:0,46,1431	0/0:28,0:26:48.11:0,48,1242	0/0:7,0:7:18.06:0,18,518
chr10	29104682	.	A	AT	801.21	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-4.931;DP=610;FS=0.000;HRun=9;HaplotypeScore=59.8133;InbreedingCoeff=0.8604;MQ=74.29;MQ0=0;MQRankSum=-0.456;QD=24.28;ReadPosRankSum=0.457;VQSLOD=4.2935;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,29:33:81.22:896,81,0	0/0:7,0:7:21:0,21,182	0/0:13,1:15:31.97:0,32,260	0/0:11,0:12:26.47:0,26,214	0/0:17,0:17:44.99:0,45,391	0/0:20,0:20:53.98:0,54,469	0/0:34,0:34:92.94:0,93,800	0/0:27,1:28:44.79:0,45,615	0/0:15,0:16:47.03:0,47,396	0/0:26,0:26:71.98:0,72,625	0/0:11,0:11:29.99:0,30,260	0/0:25,0:25:74.99:0,75,651	0/0:22,2:24:29.78:0,30,483	0/0:22,1:23:17.91:0,18,383	0/0:31,0:31:74.97:0,75,651	0/0:36,0:36:95.92:0,96,820	0/0:24,0:24:65.98:0,66,573	0/0:11,0:11:32.99:0,33,286	0/0:28,0:28:74.97:0,75,647	0/0:27,0:27:77.97:0,78,673	0/0:22,0:22:62.99:0,63,547	0/0:19,0:19:53.98:0,54,469	0/0:14,0:14:6.96:0,7,257	0/0:33,0:36:96.07:0,96,799	0/0:19,0:18:41.97:0,42,364	0/0:32,0:32:80.95:0,81,700	0/0:17,0:17:44.98:0,45,390	0/0:3,0:3:9:0,9,78
chr10	29105529	.	A	AGTGTGTGT	12845.72	PASS	AB=1.000;AC=52;AF=0.963;AN=54;BaseQRankSum=-1.732;DP=679;FS=0.000;HRun=0;HaplotypeScore=203.7409;InbreedingCoeff=0.1550;MQ=51.81;MQ0=7;MQRankSum=-0.283;QD=19.67;ReadPosRankSum=-1.664;VQSLOD=4.0026;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:35,0:34:18:202,18,0	1/1:4,5:11:15.05:597,15,0	./.	0/1:29,0:15:0:0,0,0	1/1:13,11:23:6.02:246,6,0	1/1:11,10:23:15.05:607,15,0	1/1:16,7:23:14.93:605,15,0	1/1:35,0:35:45.15:1087,45,0	1/1:21,0:20:18.06:456,18,0	1/1:15,8:25:32.31:668,32,0	1/1:8,8:16:9.03:363,9,0	1/1:18,13:33:27.08:980,27,0	1/1:12,17:32:20.81:777,21,0	1/1:15,11:28:20.81:840,21,0	1/1:14,0:31:12.04:427,12,0	1/1:8,0:20:5.67:205,6,0	1/1:9,0:17:5.98:124,6,0	0/1:13,0:11:1.93:183,0,2	1/1:13,0:21:33.72:627,34,0	1/1:24,0:24:9.03:264,9,0	1/1:28,0:28:21.07:474,21,0	1/1:14,8:23:15.05:600,15,0	1/1:17,0:17:11.43:287,11,0	1/1:36,0:35:11.67:256,12,0	1/1:17,7:27:15.05:608,15,0	1/1:12,15:28:45.05:881,45,0	1/1:10,7:18:12.04:432,12,0	1/1:9,0:9:3.01:47,3,0
chr10	29106166	.	CAT	C	4126.92	PASS	AB=0.794;AC=45;AF=0.833;AN=54;BaseQRankSum=2.046;DP=400;FS=0.000;HRun=0;HaplotypeScore=59.9143;InbreedingCoeff=0.2761;MQ=79.67;MQ0=5;MQRankSum=-0.808;QD=11.28;ReadPosRankSum=1.143;VQSLOD=3.1527;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,0:23:5.68:28,6,0	1/1:2,1:5:11.68:87,12,0	0/0:23,0:14:7.67:0,8,56	0/1:38,0:19:0.34:0,0,38	1/1:4,8:14:11.93:246,12,0	1/1:3,13:19:35.60:360,36,0	1/1:4,4:8:12.04:141,12,0	1/1:20,21:44:27.14:682,27,0	0/0:5,0:8:12.01:0,12,126	1/1:7,3:10:7.49:78,7,0	1/1:3,3:7:8.86:85,9,0	1/1:6,4:11:14.54:131,15,0	1/1:4,8:14:15.04:177,15,0	1/1:3,2:8:11.70:99,12,0	1/1:5,8:14:23.90:261,24,0	1/1:4,5:12:23.57:219,24,0	0/1:10,2:13:40.60:41,0,328	0/1:12,2:15:34.51:35,0,413	1/1:4,6:10:21.06:244,21,0	1/1:4,6:11:6.74:155,7,0	1/1:3,3:7:11.87:120,12,0	1/1:6,2:8:6.02:71,6,0	./.	1/1:2,5:8:11.87:120,12,0	0/1:8,7:19:14.80:236,0,15	0/1:9,7:17:20.80:192,0,21	1/1:7,5:14:17.72:169,18,0	1/1:5,5:10:4.64:151,5,0
chr10	29107635	.	TA	T	1017.29	PASS	AB=0.871;AC=12;AF=0.214;AN=56;BaseQRankSum=11.078;DP=517;FS=16.930;HRun=12;HaplotypeScore=58.8465;InbreedingCoeff=0.5813;MQ=70.28;MQ0=1;MQRankSum=1.923;QD=6.44;ReadPosRankSum=3.100;VQSLOD=0.5822;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,43:48:86.09:852,86,0	0/0:11,0:11:27.05:0,27,274	0/0:10,0:9:5.75:0,6,42	0/0:9,0:8:7.22:0,7,49	0/0:25,2:29:4.50:0,4,510	0/0:15,0:15:30.06:0,30,305	0/0:15,0:15:36.03:0,36,346	0/0:28,1:29:36.85:0,37,546	1/1:2,0:12:18.33:53,18,0	0/0:21,1:23:34.35:0,34,526	0/0:17,1:18:39.07:0,39,391	0/0:22,2:24:10.62:0,11,458	0/1:15,3:18:21.64:22,0,334	0/0:18,0:18:45.04:0,45,439	0/0:17,0:17:51.02:0,51,475	0/0:13,0:13:36.06:0,36,359	1/1:1,0:30:50.92:147,51,0	1/1:7,0:23:32.58:94,33,0	0/0:17,0:18:23.83:0,24,374	0/0:22,0:22:48.08:0,48,477	0/1:12,1:13:2.19:2,0,162	0/1:8,1:9:2.19:2,0,162	0/0:7,0:7:18.04:0,18,183	0/0:13,0:13:33.06:0,33,330	0/0:20,2:22:33.85:0,34,509	0/0:14,0:14:33.07:0,33,335	0/0:31,1:32:60.86:0,61,770	0/1:3,1:4:11.21:11,0,79
chr10	29107796	.	T	TACACATAC	2464.23	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=0.486;DP=773;FS=4.909;HRun=0;HaplotypeScore=221.1531;InbreedingCoeff=0.8383;MQ=58.22;MQ0=10;MQRankSum=-2.447;QD=19.56;ReadPosRankSum=-2.181;VQSLOD=2.7189;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,120,2514	0/0:14,0:14:30.07:0,30,613	0/0:36,0:16:25.18:0,25,282	0/1:49,0:21:13.09:13,0,410	0/0:17,0:17:39.10:0,39,829	0/0:13,0:13:30.09:0,30,672	0/0:33,0:33:77.32:0,77,1698	0/0:41,0:39:72.19:0,72,1440	1/1:24,8:32:35.87:974,36,0	0/0:26,0:26:62.74:0,63,1319	0/0:24,0:24:39.02:0,39,760	0/0:34,0:33:87.22:0,87,1945	0/0:29,0:29:69.19:0,69,1592	0/0:26,0:25:60.16:0,60,1358	0/0:19,0:19:36.58:0,37,850	0/0:31,0:31:77.73:0,78,1690	1/1:23,9:32:57.01:1295,57,0	1/1:11,2:13:17.74:329,18,0	0/0:24,0:24:60.12:0,60,1012	0/0:29,0:29:69.17:0,69,1446	0/0:53,0:53:99:0,111,2352	0/0:18,0:18:38.89:0,39,791	0/0:15,0:15:29.69:0,30,544	0/0:32,0:32:75.19:0,75,1652	0/0:22,0:22:51.14:0,51,1142	0/0:27,0:27:69.23:0,69,1670	0/0:26,0:26:66.21:0,66,1545	0/0:7,0:7:21.07:0,21,479
chr10	29107825	.	GCA	G	9479.18	PASS	AB=0.670;AC=47;AF=0.870;AN=54;BaseQRankSum=-1.485;DP=787;FS=0.000;HRun=0;HaplotypeScore=132.3592;InbreedingCoeff=-0.1192;MQ=53.87;MQ0=18;MQRankSum=3.672;QD=12.91;ReadPosRankSum=0.580;VQSLOD=4.7537;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:18,27:44:57.16:650,57,0	0/1:5,9:14:16.12:277,0,16	0/1:38,0:15:7.65:8,0,117	./.	1/1:6,10:16:18.05:205,18,0	1/1:6,7:15:17.88:185,18,0	1/1:20,16:36:54.54:589,55,0	1/1:27,9:31:27.05:296,27,0	1/1:22,0:32:5.34:76,5,0	1/1:6,15:22:41.89:427,42,0	0/1:3,18:22:16.12:278,0,16	1/1:11,20:34:59.05:616,59,0	1/1:11,23:35:44.84:492,45,0	1/1:9,19:29:59.67:623,60,0	1/1:7,17:27:11.80:312,12,0	1/1:11,24:36:69.02:766,69,0	1/1:18,2:30:25.90:166,26,0	0/1:7,0:14:16.44:53,0,16	1/1:11,4:14:11.86:116,12,0	1/1:8,19:28:41.95:459,42,0	1/1:25,33:60:74.31:794,74,0	0/1:6,6:12:25.09:91,0,25	0/1:5,9:16:4.47:164,0,4	0/1:12,20:31:41.23:462,0,41	1/1:9,14:26:35.60:350,36,0	1/1:9,16:26:1.86:452,2,0	1/1:10,14:26:35.93:390,36,0	1/1:3,5:9:17.16:184,17,0
chr10	29108367	.	A	AAAG	6013.86	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-12.312;DP=749;FS=8.359;HRun=0;HaplotypeScore=98.7662;InbreedingCoeff=0.9993;MQ=86.13;MQ0=0;MQRankSum=-4.031;QD=50.96;ReadPosRankSum=1.716;VQSLOD=7.0368;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,35:38:90.31:1985,90,0	0/0:10,0:10:30.06:0,30,426	0/0:26,0:26:62.88:0,63,948	0/0:29,0:29:69.16:0,69,1028	0/0:28,0:28:78.23:0,78,1198	0/0:33,0:33:93.31:0,93,1466	0/0:25,0:25:75.22:0,75,1144	0/0:37,0:37:90.27:0,90,1344	1/1:1,20:21:57.13:1210,57,0	0/0:32,0:32:96.31:0,96,1496	0/0:24,0:24:72.23:0,72,1135	0/0:35,0:35:99:0,99,1543	0/0:26,0:26:66.21:0,66,1035	0/0:23,0:23:66.21:0,66,1038	0/0:38,0:38:99:0,114,1809	0/0:22,0:22:66.22:0,66,1054	1/1:4,34:38:84.29:1851,84,0	1/1:3,17:20:45.15:968,45,0	0/0:27,0:27:69.21:0,69,1053	0/0:34,0:34:84.29:0,84,1340	0/0:28,0:28:77.75:0,78,1203	0/0:26,0:26:69.19:0,69,1056	0/0:31,0:31:87.30:0,87,1397	0/0:21,0:21:60.19:0,60,937	0/0:24,0:24:63.20:0,63,985	0/0:21,0:21:60.20:0,60,964	0/0:23,0:23:63.17:0,63,940	0/0:8,0:8:24.08:0,24,373
chr10	29112714	.	AT	A	1009.58	PASS	AB=0.857;AC=7;AF=0.125;AN=56;BaseQRankSum=7.062;DP=594;FS=8.227;HRun=11;HaplotypeScore=62.5724;InbreedingCoeff=0.7415;MQ=72.34;MQ0=0;MQRankSum=-0.372;QD=12.62;ReadPosRankSum=3.791;VQSLOD=3.1223;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:90.23:0,90,960	0/0:10,1:11:8.44:0,8,295	0/0:15,1:15:17.61:0,18,157	0/0:11,0:10:8.22:0,8,62	0/0:31,0:33:87.01:0,87,892	0/0:17,0:17:48.11:0,48,504	0/0:21,0:22:54:0,54,558	0/0:23,0:23:50.98:0,51,514	1/1:2,16:18:9.97:288,10,0	0/0:25,0:26:66.88:0,67,685	0/0:27,0:27:66.15:0,66,692	0/0:19,2:21:4.83:0,5,449	0/0:23,0:23:60.10:0,60,607	0/0:23,0:23:57.98:0,58,580	0/0:31,0:33:93.02:0,93,954	0/0:23,0:23:51.13:0,51,544	1/1:3,20:23:24.95:411,25,0	1/1:2,19:21:50.93:419,51,0	0/1:14,3:18:35.12:35,0,238	0/0:22,0:22:60.08:0,60,619	0/0:11,0:11:27.06:0,27,282	0/0:17,0:17:45.05:0,45,460	0/0:24,0:26:71.85:0,72,731	0/0:22,0:22:63.15:0,63,665	0/0:16,0:16:42.10:0,42,442	0/0:22,0:25:62.99:0,63,628	0/0:26,0:29:74.68:0,75,738	0/0:5,0:5:12.03:0,12,128
chr10	29114161	.	AT	A	2232.89	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=11.076;DP=831;FS=0.413;HRun=8;HaplotypeScore=78.8849;InbreedingCoeff=0.9997;MQ=70.34;MQ0=0;MQRankSum=-1.867;QD=24.81;ReadPosRankSum=1.711;VQSLOD=4.3641;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:57:99:0,165,1969	0/0:14,0:14:33.09:0,33,387	0/0:16,0:15:33.05:0,33,372	0/0:20,0:19:33.37:0,33,378	0/0:27,0:27:75.23:0,75,906	0/0:17,0:17:45.14:0,45,540	0/0:40,0:40:99:0,111,1334	0/0:33,0:33:78.20:0,78,910	1/1:2,27:29:78.12:753,78,0	0/0:33,0:33:78.23:0,78,930	0/0:21,0:21:63.18:0,63,749	0/0:39,0:39:99:0,111,1331	0/0:39,0:39:99:0,108,1304	0/0:38,0:38:99:0,105,1258	0/0:41,0:41:76.69:0,77,1193	0/0:27,1:28:49.23:0,49,846	1/1:1,43:44:99:1188,123,0	1/1:2,15:17:45.07:435,45,0	0/0:26,0:26:75.22:0,75,896	0/0:20,0:20:57.17:0,57,683	0/0:27,0:27:75.22:0,75,895	0/0:25,0:25:75.23:0,75,906	0/0:23,0:23:66.19:0,66,786	0/0:40,1:41:82.36:0,82,1276	0/0:25,0:25:72.22:0,72,870	0/0:33,0:34:84.11:0,84,983	0/0:45,0:45:99:0,123,1470	0/0:12,0:12:36.11:0,36,435
chr10	29114906	.	T	TTTCC	12189.91	PASS	AB=0.744;AC=48;AF=0.923;AN=52;BaseQRankSum=-4.707;DP=697;FS=5.156;HRun=0;HaplotypeScore=111.9220;InbreedingCoeff=-0.0694;MQ=66.44;MQ0=4;MQRankSum=1.452;QD=18.19;ReadPosRankSum=-0.070;VQSLOD=4.3146;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:30:12:155,12,0	1/1:2,10:12:9.03:212,9,0	./.	./.	1/1:11,15:26:42.10:910,42,0	1/1:12,0:21:12.04:192,12,0	1/1:29,0:29:28.86:302,29,0	1/1:36,0:34:8.99:103,9,0	0/1:26,0:26:13.94:14,0,330	1/1:10,13:26:51.12:916,51,0	1/1:8,12:20:27:534,27,0	1/1:13,15:29:9.05:609,9,0	1/1:14,16:30:21.07:494,21,0	1/1:21,11:32:12.04:283,12,0	1/1:14,0:33:15.05:232,15,0	0/1:11,19:31:1.71:592,0,2	1/1:30,0:35:42.07:728,42,0	1/1:13,0:19:27.56:589,28,0	1/1:11,9:21:30.09:634,30,0	1/1:11,15:26:45.05:956,45,0	1/1:15,11:26:12.04:283,12,0	0/1:12,9:21:5.23:466,0,5	1/1:6,13:20:15.47:355,15,0	1/1:9,20:29:36.12:849,36,0	0/1:14,13:28:25.62:403,0,26	1/1:8,13:21:39.10:815,39,0	1/1:14,9:23:18.06:420,18,0	1/1:14,4:18:6.02:141,6,0
chr10	29115854	.	CA	C	6697.77	PASS	AB=0.678;AC=44;AF=0.786;AN=56;BaseQRankSum=-4.573;DP=649;FS=1.726;HRun=13;HaplotypeScore=75.9967;InbreedingCoeff=0.5433;MQ=74.68;MQ0=0;MQRankSum=-0.002;QD=11.67;ReadPosRankSum=3.159;VQSLOD=4.9628;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:6,15:22:19.30:189,0,19	0/1:2,11:13:5.34:129,0,5	0/1:16,0:13:9.29:9,0,111	0/0:21,0:19:7.47:0,7,82	1/1:7,22:30:52.35:374,52,0	1/1:1,18:22:53.84:368,54,0	1/1:1,15:16:32.81:241,33,0	1/1:14,10:25:25.73:181,26,0	0/0:2,0:17:35.60:0,36,192	1/1:3,17:21:20.52:302,21,0	1/1:4,18:23:14.74:261,15,0	1/1:9,16:25:10.80:215,11,0	1/1:8,18:29:47.78:323,48,0	1/1:6,24:32:51.75:359,52,0	1/1:4,26:32:72.66:515,73,0	0/1:9,18:29:33.72:225,0,34	0/0:4,1:20:12.64:0,13,156	0/0:3,0:17:18.43:0,18,95	1/1:5,20:27:45.16:396,45,0	1/1:9,15:26:7.53:201,8,0	1/1:3,2:6:7.97:50,8,0	1/1:9,24:36:38.25:440,38,0	1/1:10,20:31:17.97:336,18,0	1/1:3,9:13:25.89:181,26,0	1/1:4,19:27:52.87:352,53,0	1/1:6,26:34:55.41:550,55,0	1/1:7,22:30:32.50:390,33,0	1/1:4,5:9:14.85:109,15,0
chr10	29119706	.	C	CATTAGTTCGTTCAACTGAGC	2473.46	PASS	AB=0.750;AC=20;AF=0.909;AN=22;BaseQRankSum=-3.105;DP=45;FS=5.724;HRun=0;HaplotypeScore=28.1331;InbreedingCoeff=-0.2323;MQ=136.66;MQ0=0;MQRankSum=-1.536;QD=77.30;ReadPosRankSum=-0.990;VQSLOD=2.0301;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/1:4,0:6:55.56:841,0,56	0/1:4,1:6:30.05:901,0,30	1/1:1,0:1:3.01:71,3,0	./.	./.	./.	./.	1/1:2,0:2:6.02:177,6,0	1/1:2,0:2:6.02:166,6,0	./.	./.	./.	./.	1/1:5,0:5:6.01:84,6,0	1/1:2,0:2:5.99:50,6,0	./.	./.	1/1:2,0:2:6:117,6,0	./.	./.	./.	./.	1/1:2,0:2:3:26,3,0	1/1:2,0:2:6.01:107,6,0	1/1:2,0:2:2.97:20,3,0	./.
chr10	29119801	.	T	TGA	987.52	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=2.514;DP=444;FS=5.245;HRun=0;HaplotypeScore=110.1271;InbreedingCoeff=0.9323;MQ=72.25;MQ0=0;MQRankSum=0.475;QD=31.86;ReadPosRankSum=-0.891;VQSLOD=5.0596;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:21.07:0,21,276	0/0:12,0:12:24.03:0,24,289	0/0:18,0:14:23.11:0,23,358	0/0:15,0:14:20.93:0,21,391	0/0:27,0:27:50.95:0,51,595	0/0:19,0:19:54.14:0,54,690	0/0:13,0:13:39.04:0,39,473	0/0:23,0:23:45.08:0,45,553	1/1:1,13:14:27.09:447,27,0	0/0:17,0:17:45.08:0,45,554	0/0:29,0:29:50.99:0,51,591	0/0:6,0:6:18.06:0,18,236	0/0:13,0:13:27.09:0,27,353	0/0:13,0:13:36.07:0,36,453	0/0:11,0:11:26.79:0,27,335	0/0:4,0:4:12.04:0,12,157	1/1:3,6:9:21:324,21,0	1/1:1,7:8:21.07:358,21,0	0/0:12,0:12:30.10:0,30,392	0/0:31,0:31:78.12:0,78,939	0/0:12,0:12:36.08:0,36,454	0/0:28,0:28:71.39:0,71,864	0/0:27,0:27:53.78:0,54,649	0/0:7,0:7:6.02:0,6,79	0/0:18,0:18:44.64:0,45,551	0/0:23,0:23:48.13:0,48,601	0/0:22,0:22:54.17:0,54,693	0/0:4,0:4:12.04:0,12,157
chr10	29120940	.	CACAA	C	3219.64	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.575;DP=581;FS=0.000;HRun=0;HaplotypeScore=131.3426;InbreedingCoeff=0.9845;MQ=75.83;MQ0=0;MQRankSum=-1.371;QD=36.59;ReadPosRankSum=6.511;VQSLOD=3.6694;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:25.18:0,25,116	0/0:10,0:10:30.09:0,30,610	0/0:19,0:15:23.75:0,24,668	0/0:14,0:14:29.55:0,30,404	0/0:27,0:27:78.16:0,78,1443	0/0:20,0:20:45.05:0,45,668	0/0:17,0:18:45.12:0,45,839	0/0:29,0:29:78.20:0,78,1422	1/1:5,23:28:66.22:1015,66,0	0/0:22,0:22:60.18:0,60,1095	0/0:15,0:15:45.12:0,45,910	0/0:25,0:25:66.20:0,66,1290	0/0:25,0:25:62.86:0,63,1212	0/0:21,0:21:54.11:0,54,931	0/0:25,0:26:75.18:0,75,1303	0/0:27,0:27:66.13:0,66,1130	1/1:1,30:31:81.23:1230,81,0	1/1:4,25:29:72.25:1118,72,0	0/0:8,0:8:24.07:0,24,480	0/0:26,0:25:72.19:0,72,1294	0/0:9,0:9:21.05:0,21,376	0/0:17,0:17:51.13:0,51,952	0/0:28,0:28:75.21:0,75,1444	0/0:10,0:10:24.08:0,24,502	0/0:21,0:21:45.13:0,45,902	0/0:16,0:16:45.14:0,45,935	0/0:35,0:36:99:0,102,1830	0/0:4,0:4:12.02:0,12,213
chr10	29120942	.	C	CA	6810.36	PASS	AB=0.601;AC=38;AF=0.679;AN=56;BaseQRankSum=-13.189;DP=631;FS=8.762;HRun=11;HaplotypeScore=100.6775;InbreedingCoeff=0.5174;MQ=75.84;MQ0=0;MQRankSum=-1.331;QD=13.76;ReadPosRankSum=-3.078;VQSLOD=3.5384;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:3,0:17:26.48:0,26,78	1/1:1,9:10:3.82:220,4,0	0/0:18,0:15:27.60:0,28,181	0/0:16,0:15:13.69:0,14,70	1/1:7,17:27:13.21:394,13,0	1/1:9,14:23:15.64:205,16,0	1/1:4,15:20:35.79:327,36,0	1/1:12,18:33:6.48:394,6,0	0/0:26,0:26:43.24:0,43,129	0/1:7,18:25:0.34:323,0,0	1/1:3,11:16:15.41:285,15,0	1/1:5,24:29:48.10:487,48,0	0/1:7,20:30:25.77:310,0,26	1/1:8,18:26:10.29:277,10,0	1/1:11,15:26:48.06:476,48,0	0/1:12,18:30:10.40:269,0,10	0/0:31,0:31:52.74:0,53,157	0/0:27,0:27:48.88:0,49,146	1/1:3,6:9:17.97:158,18,0	0/1:9,17:28:1.64:330,0,2	1/1:1,8:10:17.83:156,18,0	0/1:9,12:22:12.72:240,0,13	1/1:4,23:33:42.35:514,42,0	1/1:0,11:11:24.05:244,24,0	0/1:7,15:23:7.56:280,0,8	1/1:5,13:21:18.32:314,18,0	1/1:24,13:38:6.08:522,6,0	1/1:1,2:4:11.22:83,11,0
chr10	29121545	.	G	GGAGGTGAAAGGTTTCCCCATCAGAAGT	34016.50	PASS	AB=0.646;AC=46;AF=0.958;AN=48;BaseQRankSum=1.157;DP=227;FS=46.045;HRun=0;HaplotypeScore=362.9197;InbreedingCoeff=-0.0722;MQ=69.17;MQ0=0;MQRankSum=-2.739;QD=149.85;ReadPosRankSum=2.669;VQSLOD=2.9082;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	1/1:4,0:4:6.02:503,6,0	0/1:4,1:10:13.06:1317,0,13	0/1:2,0:4:24.55:570,0,25	1/1:17,0:17:25.80:1053,26,0	1/1:10,0:10:21.07:1084,21,0	1/1:6,0:6:15.05:864,15,0	1/1:10,0:10:30.09:1674,30,0	./.	1/1:10,0:9:21.07:1730,21,0	1/1:13,0:13:33.11:2332,33,0	1/1:14,0:14:24.07:1691,24,0	1/1:13,0:13:33.11:2646,33,0	1/1:11,0:11:30.10:2552,30,0	1/1:16,0:16:33.11:2821,33,0	1/1:15,0:15:39.11:3022,39,0	./.	./.	1/1:2,0:2:6.02:222,6,0	1/1:10,0:10:21.82:1122,22,0	1/1:8,0:7:3.01:261,3,0	1/1:12,0:12:29.99:1898,30,0	1/1:8,0:8:15.05:992,15,0	1/1:5,0:5:9.03:577,9,0	1/1:9,0:9:24.08:1408,24,0	1/1:9,0:9:27.09:1510,27,0	1/1:10,0:10:24.08:2025,24,0	1/1:1,0:1:3.01:142,3,0
chr10	29123322	.	AAT	A	1152.27	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.772;DP=439;FS=0.703;HRun=0;HaplotypeScore=67.5413;InbreedingCoeff=0.8157;MQ=65.35;MQ0=0;MQRankSum=2.068;QD=30.32;ReadPosRankSum=3.229;VQSLOD=5.3910;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,37:38:83.87:1247,84,0	0/0:4,0:4:12.04:0,12,181	0/0:13,0:8:15.55:0,16,125	0/0:20,0:13:11.70:0,12,197	0/0:25,0:25:73.34:0,73,1035	0/0:24,0:24:72.23:0,72,1186	0/0:12,0:12:36.12:0,36,563	0/0:33,0:33:93.18:0,93,1232	0/0:11,0:11:29.05:0,29,272	0/0:10,0:10:30.10:0,30,480	0/0:18,0:18:51.16:0,51,807	0/0:14,0:14:42.08:0,42,594	0/0:12,0:12:36.08:0,36,452	0/0:7,0:7:21.07:0,21,333	0/0:15,0:15:42.10:0,42,607	0/0:10,0:10:30.07:0,30,405	0/0:31,0:31:79.23:0,79,784	0/0:14,0:14:33.07:0,33,412	0/0:17,0:17:50.94:0,51,670	0/0:14,0:14:42.14:0,42,666	0/0:9,0:9:27.07:0,27,394	0/0:2,0:2:6:0,6,56	0/0:6,0:6:12.03:0,12,161	0/0:9,0:9:23.91:0,24,376	0/0:23,0:23:69.07:0,69,956	0/0:12,0:12:36.09:0,36,502	0/0:23,0:23:69.23:0,69,1133	0/0:12,0:11:33.11:0,33,491
chr10	29123328	.	A	AT	166.61	PASS	AB=0.800;AC=3;AF=0.054;AN=56;BaseQRankSum=7.249;DP=421;FS=0.799;HRun=0;HaplotypeScore=61.3312;InbreedingCoeff=-0.0681;MQ=62.12;MQ0=0;MQRankSum=-3.337;QD=3.14;ReadPosRankSum=-1.321;VQSLOD=2.5113;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:87.06:0,87,802	0/0:4,0:4:12.03:0,12,153	0/0:12,0:8:7.97:0,8,163	0/0:14,0:9:5.63:0,6,141	0/0:24,0:24:64.31:0,64,837	0/0:24,0:24:72.23:0,72,991	0/0:16,0:16:45.12:0,45,581	0/0:25,0:25:75.23:0,75,1003	0/1:9,1:10:38.56:48,0,39	0/0:10,0:10:27.09:0,27,376	0/0:18,0:18:54.14:0,54,716	0/0:13,0:13:36.09:0,36,482	0/0:14,0:14:36.10:0,36,458	0/0:7,0:7:21.07:0,21,294	0/0:16,0:16:45.12:0,45,582	0/0:8,0:8:24.08:0,24,336	0/1:20,8:28:73.63:147,0,74	0/1:9,6:15:71.87:72,0,74	0/0:20,0:20:57.15:0,57,710	0/0:15,0:15:45.12:0,45,608	0/0:9,0:9:27.08:0,27,360	0/0:3,0:3:9:0,9,104	0/0:6,0:6:15.02:0,15,188	0/0:8,0:8:23.81:0,24,304	0/0:19,0:19:57.19:0,57,793	0/0:10,0:10:30.09:0,30,403	0/0:24,0:24:72.23:0,72,990	0/0:12,0:11:33.11:0,33,459
chr10	29123329	.	A	AAAAT	808.40	PASS	AB=0.800;AC=3;AF=0.054;AN=56;BaseQRankSum=6.704;DP=425;FS=0.000;HRun=0;HaplotypeScore=87.4238;InbreedingCoeff=-0.0723;MQ=60.64;MQ0=0;MQRankSum=-1.488;QD=15.25;ReadPosRankSum=-0.935;VQSLOD=3.0118;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:43.93:0,44,861	0/0:4,0:4:9.03:0,9,162	0/0:11,0:8:2.47:0,2,217	0/0:13,0:8:7.56:0,8,153	0/0:23,0:23:60.04:0,60,956	0/0:24,0:24:72.23:0,72,1237	0/0:16,0:16:48.11:0,48,701	0/0:23,0:23:69.20:0,69,1118	0/1:9,1:10:33.05:110,0,33	0/0:10,0:10:30.08:0,30,508	0/0:20,0:20:51.11:0,51,779	0/0:15,0:15:33.11:0,33,567	0/0:15,0:15:33.09:0,33,528	0/0:7,0:7:21.07:0,21,378	0/0:17,0:17:42.12:0,42,697	0/0:8,0:8:24.08:0,24,432	0/1:20,8:28:78.61:407,0,79	0/1:9,6:15:44.58:391,0,45	0/0:19,0:19:48.13:0,48,762	0/0:15,0:15:45.13:0,45,776	0/0:9,0:9:27.08:0,27,456	0/0:4,0:4:9:0,9,105	0/0:6,0:6:15.02:0,15,232	0/0:8,0:8:21.54:0,22,368	0/0:21,0:21:57.19:0,57,953	0/0:10,0:10:30.09:0,30,488	0/0:24,0:24:72.23:0,72,1236	0/0:12,0:11:33.11:0,33,552
chr10	29123618	.	G	GTCCTTCCTAGAGCA	890.02	PASS	AB=0.833;AC=17;AF=0.944;AN=18;BaseQRankSum=-2.270;DP=27;FS=3.358;HRun=0;HaplotypeScore=16.4464;MQ=124.45;MQ0=0;MQRankSum=-1.678;QD=49.45;ReadPosRankSum=0.691;VQSLOD=1.9598;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	1/1:1,0:1:3.01:59,3,0	1/1:0,1:2:6.02:348,6,0	0/1:4,0:4:48.49:145,0,48	1/1:1,0:2:6.02:140,6,0	./.	1/1:1,0:1:2.97:20,3,0	1/1:3,0:3:3.01:56,3,0	./.	./.	./.	./.	./.	1/1:1,0:2:3.01:90,3,0	./.	1/1:1,0:1:3.01:56,3,0	./.	./.	./.	./.	./.	./.	./.	./.	./.	1/1:1,0:1:3.01:54,3,0	./.	./.
chr10	29125335	.	G	GT	2944.29	PASS	AB=0.965;AC=52;AF=0.929;AN=56;BaseQRankSum=-5.801;DP=593;FS=162.466;HRun=2;HaplotypeScore=152.0215;InbreedingCoeff=-0.0984;MQ=90.14;MQ0=0;MQRankSum=3.708;QD=4.97;ReadPosRankSum=1.704;VQSLOD=0.0327;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:19:0.22:45,0,0	1/1:15,0:15:20.61:102,21,0	0/1:26,2:28:16.26:16,0,477	0/1:34,3:37:26.30:26,0,686	1/1:31,1:32:24.41:153,24,0	0/1:26,0:26:5.62:46,0,6	1/1:12,0:11:14.31:70,14,0	1/1:35,0:35:89.37:543,89,0	1/1:18,0:18:17.50:97,18,0	1/1:24,0:24:41.06:218,41,0	1/1:12,0:12:3.30:40,3,0	1/1:23,0:23:21.21:140,21,0	1/1:19,0:19:6.80:82,7,0	1/1:20,0:20:5.07:80,5,0	1/1:27,0:27:13.79:109,14,0	1/1:26,0:26:14.08:118,14,0	1/1:15,0:15:11.98:59,12,0	1/1:9,0:9:20.64:82,21,0	1/1:22,0:22:19.58:114,20,0	1/1:29,0:29:22.07:165,22,0	1/1:14,0:13:27.09:110,27,0	0/1:23,0:23:10.35:86,0,10	1/1:20,1:21:23.70:126,24,0	1/1:12,0:12:8.49:62,8,0	1/1:23,0:23:11.89:77,12,0	1/1:17,0:17:14.26:143,14,0	1/1:29,0:29:17.32:102,17,0	1/1:6,0:6:11.37:44,11,0
chr10	29127249	.	A	AGATT	1918.17	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-3.698;DP=677;FS=13.442;HRun=0;HaplotypeScore=107.5367;InbreedingCoeff=0.9954;MQ=95.01;MQ0=0;MQRankSum=-5.146;QD=53.28;ReadPosRankSum=1.290;VQSLOD=4.2613;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,28:35:84.02:2013,84,0	0/0:13,0:13:39.13:0,39,718	0/0:35,0:35:87:0,87,1575	0/0:34,0:34:78.20:0,78,1332	0/0:19,0:19:57.18:0,57,1007	0/0:22,0:22:63.22:0,63,1138	0/0:23,0:23:69.24:0,69,1270	0/0:26,0:26:63.22:0,63,1137	0/0:30,0:30:81.28:0,81,1490	0/0:20,0:20:57.20:0,57,1025	0/0:22,0:22:66.23:0,66,1193	0/0:22,0:22:57.20:0,57,1036	0/0:27,0:27:72.24:0,72,1296	0/0:17,0:17:48.16:0,48,883	0/0:29,0:29:81.28:0,81,1490	0/0:26,0:26:75.25:0,75,1339	0/0:35,0:35:99:0,105,1885	0/0:8,0:8:24.08:0,24,442	0/0:11,0:11:30.10:0,30,525	0/0:23,0:23:60.19:0,60,1074	0/0:23,0:23:66.23:0,66,1214	0/0:18,0:18:54.17:0,54,929	0/0:19,0:19:51.17:0,51,908	0/0:31,0:31:81.23:0,81,1455	0/0:34,0:34:99:0,99,1775	0/0:25,0:25:75.25:0,75,1350	0/0:36,0:36:99:0,99,1811	0/0:13,0:13:24.08:0,24,441
chr10	29127701	.	GGTGTGTGTGTGTGTGT	G	9772.34	PASS	AB=0.725;AC=36;AF=0.667;AN=54;BaseQRankSum=4.679;DP=606;FS=10.110;HRun=0;HaplotypeScore=252.2377;InbreedingCoeff=0.3454;MQ=65.41;MQ0=16;MQRankSum=-5.799;QD=22.26;ReadPosRankSum=-0.371;VQSLOD=1.6209;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:35:50.82:0,51,2572	1/1:6,0:6:3.01:112,3,0	0/0:33,0:23:6.02:0,6,120	0/0:26,0:20:3.01:0,3,42	0/1:14,10:24:38.33:297,0,38	0/1:13,10:25:1.91:619,0,2	1/1:10,13:23:3.01:42,3,0	1/1:25,11:35:33.04:560,33,0	0/0:20,0:20:33.11:0,33,1355	1/1:11,9:20:27.09:806,27,0	./.	0/1:11,11:23:41.30:641,0,41	1/1:11,8:19:24.08:957,24,0	1/1:15,6:21:9.92:397,10,0	0/1:14,17:33:38.61:1091,0,39	1/1:14,13:28:29.59:1138,30,0	0/0:10,0:18:33.11:0,33,1691	0/0:9,0:17:21.07:0,21,986	1/1:15,3:17:8.76:329,9,0	1/1:5,8:12:6.02:188,6,0	0/1:30,0:28:19.18:202,0,19	1/1:7,9:16:6.02:263,6,0	0/1:10,8:19:1.81:363,0,2	1/1:20,9:29:3.01:132,3,0	1/1:4,5:10:3.01:66,3,0	1/1:10,17:25:41.07:1268,41,0	1/1:13,0:13:15.02:237,15,0	1/1:5,1:6:3.01:64,3,0
chr10	29129637	.	TCC	T	2109.34	PASS	AB=0.941;AC=9;AF=0.161;AN=56;BaseQRankSum=4.904;DP=479;FS=2.269;HRun=11;HaplotypeScore=65.6176;InbreedingCoeff=0.8170;MQ=77.72;MQ0=2;MQRankSum=-0.339;QD=17.88;ReadPosRankSum=5.416;VQSLOD=2.4006;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,27:35:62.87:650,63,0	0/0:3,0:3:9.01:0,9,99	0/1:15,1:16:27.03:27,0,280	0/0:21,0:19:8.58:0,9,414	0/0:12,0:12:15.02:0,15,189	0/0:18,0:18:29.57:0,30,382	0/0:23,0:23:62.61:0,63,810	0/0:15,0:17:11.51:0,12,124	1/1:1,17:18:42.10:447,42,0	0/0:18,0:18:30.08:0,30,406	0/0:10,0:12:17.53:0,18,214	0/0:20,0:20:36.10:0,36,515	0/0:12,0:14:35.06:0,35,433	0/0:17,0:18:47.52:0,48,494	0/0:17,0:17:27.07:0,27,371	0/0:20,0:20:48.09:0,48,598	1/1:5,23:28:66.14:702,66,0	1/1:4,17:20:42.08:447,42,0	0/0:13,0:13:25.72:0,26,284	0/0:10,0:10:21.04:0,21,265	0/0:14,0:14:27.03:0,27,312	0/0:11,0:12:20.55:0,21,265	0/0:14,0:14:36.03:0,36,451	0/0:27,0:27:66.09:0,66,842	0/0:16,0:17:32.26:0,32,428	0/0:12,0:13:23.52:0,24,268	0/0:20,0:20:44.56:0,45,565	0/0:7,0:7:12:0,12,113
chr10	29132662	.	AG	A	3207.23	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=11.410;DP=833;FS=4.551;HRun=1;HaplotypeScore=76.3089;InbreedingCoeff=0.9985;MQ=79.46;MQ0=0;MQRankSum=-0.796;QD=38.18;ReadPosRankSum=2.283;VQSLOD=4.4197;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,123,1961	0/0:17,0:17:51.17:0,51,815	0/0:17,0:17:48.16:0,48,747	0/0:23,0:23:69.23:0,69,1081	0/0:29,0:29:87.30:0,87,1386	0/0:18,0:18:54.18:0,54,863	0/0:25,0:25:75.26:0,75,1199	0/0:31,0:31:87.25:0,87,1348	1/1:1,33:34:48.35:1253,48,0	0/0:31,0:31:93.30:0,93,1444	0/0:16,0:16:45.15:0,45,719	0/0:55,0:55:99:0,166,2638	0/0:50,0:50:99:0,151,2392	0/0:42,0:42:99:0,126,1949	0/0:56,0:56:99:0,169,2660	0/0:40,0:40:99:0,120,1868	1/1:0,27:27:81.27:1133,81,0	1/1:0,23:23:69.23:965,69,0	0/0:20,0:20:60.20:0,60,960	0/0:23,0:23:69.24:0,69,1101	0/0:36,0:36:99:0,108,1726	0/0:31,0:31:90.31:0,90,1439	0/0:24,0:24:72.25:0,72,1148	0/0:31,0:31:93.32:0,93,1483	0/0:27,0:27:81.25:0,81,1250	0/0:34,0:34:99:0,102,1629	0/0:24,0:24:72.23:0,72,1125	0/0:7,0:7:21.05:0,21,312
chr10	29135601	.	TTGTGTATG	T	482.60	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=3.380;DP=659;FS=0.953;HRun=0;HaplotypeScore=151.7329;InbreedingCoeff=0.8652;MQ=73.38;MQ0=13;MQRankSum=-3.199;QD=7.54;ReadPosRankSum=-0.860;VQSLOD=2.6666;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:68.90:0,69,1231	0/0:6,0:6:15.02:0,15,319	0/0:37,0:23:43.32:0,43,520	0/0:38,0:20:43.33:0,43,353	0/0:16,0:16:29.60:0,30,275	0/0:25,0:24:41.01:0,41,786	0/0:21,0:20:51:0,51,895	0/0:31,0:29:66.75:0,67,766	1/1:1,33:34:14.79:393,15,0	0/0:26,0:26:63:0,63,1009	0/0:16,0:16:42.01:0,42,851	0/0:30,0:30:53.80:0,54,1129	0/0:27,0:27:68.76:0,69,866	0/0:23,0:23:38.88:0,39,784	0/0:26,0:26:60.02:0,60,1097	0/0:28,0:28:60.06:0,60,1372	1/1:2,0:19:6:89,6,0	1/1:8,0:9:2.03:120,2,0	0/0:20,0:20:50.63:0,51,455	0/0:22,0:21:45:0,45,650	0/0:32,0:31:56.49:0,56,843	0/0:15,0:15:22.51:0,23,380	0/0:22,0:22:54.40:0,54,824	0/0:26,0:26:50.23:0,50,882	0/0:15,0:15:24.01:0,24,388	0/0:26,0:25:62.76:0,63,1069	0/0:14,0:13:32.98:0,33,676	0/0:16,0:16:48.02:0,48,923
chr10	29135607	.	A	ATGTG	4332.84	PASS	AB=0.729;AC=41;AF=0.788;AN=52;BaseQRankSum=-3.167;DP=720;FS=1.184;HRun=0;HaplotypeScore=111.6157;InbreedingCoeff=0.2784;MQ=66.86;MQ0=15;MQRankSum=3.631;QD=7.34;ReadPosRankSum=0.068;VQSLOD=3.9281;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:43,0:43:23:309,23,0	1/1:7,0:7:12.37:104,12,0	./.	./.	0/1:12,5:18:0:0,0,0	0/1:16,12:29:35.40:199,0,35	1/1:18,4:22:12.04:281,12,0	1/1:33,0:31:13.04:93,13,0	0/0:35,0:34:15.02:0,15,138	0/1:23,7:30:22.14:237,0,22	1/1:18,1:20:20.77:298,21,0	1/1:13,22:37:20.52:378,21,0	1/1:21,9:33:9.47:168,9,0	1/1:11,13:26:14:312,14,0	0/1:22,8:31:33.17:180,0,33	0/1:14,18:34:16.22:415,0,16	0/0:21,0:20:3:0,3,28	0/0:7,0:7:3:0,3,27	1/1:19,0:19:6:51,6,0	1/1:23,0:22:17.80:202,18,0	1/1:23,10:36:3.01:71,3,0	1/1:7,11:19:5.71:140,6,0	1/1:23,0:23:11.93:100,12,0	1/1:15,9:28:7.81:152,8,0	1/1:13,7:18:5.38:79,5,0	1/1:23,2:23:19.28:207,19,0	1/1:14,0:14:17.72:252,18,0	1/1:16,0:16:10.83:106,11,0
chr10	29139795	.	GTGTATGTA	G	3837.83	PASS	AB=0.688;AC=27;AF=0.563;AN=48;BaseQRankSum=-1.607;DP=851;FS=1.241;HRun=0;HaplotypeScore=282.4517;InbreedingCoeff=0.6916;MQ=61.64;MQ0=11;MQRankSum=-0.445;QD=7.82;ReadPosRankSum=-0.064;VQSLOD=1.9497;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:37,0:35:8.66:118,9,0	1/1:6,6:12:15.04:295,15,0	./.	./.	1/1:19,6:25:11.76:218,12,0	0/1:16,28:42:0:0,0,0	1/1:16,1:17:9.48:138,9,0	./.	0/0:26,0:26:33.47:0,33,1137	1/1:17,23:40:69.08:1270,69,0	./.	0/0:19,0:42:47.92:0,48,436	1/1:18,24:42:9.03:222,9,0	0/1:18,17:35:0.33:1,0,0	0/0:28,0:56:32.94:0,33,289	1/1:18,20:38:9.03:219,9,0	0/0:34,0:34:30.08:0,30,861	0/0:10,0:10:12.04:0,12,421	1/1:15,5:20:15.05:332,15,0	1/1:19,10:28:2.68:71,3,0	1/1:29,2:30:21.04:414,21,0	0/1:14,21:34:0:0,0,0	1/1:23,7:29:21.07:472,21,0	0/1:18,2:19:18.66:68,0,19	0/1:14,19:34:0.01:0,0,0	0/0:44,0:45:3.93:0,4,2398	0/0:25,0:23:39.13:0,39,1390	0/0:15,0:15:18.06:0,18,599
chr10	29139869	.	CATCTATCT	C	2647.57	PASS	AB=0.943;AC=19;AF=0.396;AN=48;BaseQRankSum=3.666;DP=836;FS=1.856;HRun=0;HaplotypeScore=247.3849;InbreedingCoeff=0.4598;MQ=51.88;MQ0=16;MQRankSum=-0.295;QD=8.85;ReadPosRankSum=2.593;VQSLOD=2.6530;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:29:12.50:0,12,242	1/1:19,0:19:1.99:40,2,0	./.	./.	0/0:31,0:33:27.66:0,28,383	0/0:37,0:34:39.13:0,39,727	0/0:18,0:17:0.94:0,1,2	./.	0/1:28,0:27:8.44:84,0,8	0/0:45,0:43:54.19:0,54,1282	0/0:21,0:20:32.03:0,32,579	0/0:38,0:37:33.11:0,33,634	0/0:49,0:48:90.18:0,90,1640	0/0:34,0:32:31.88:0,32,463	0/0:49,0:47:25.20:0,25,266	0/1:37,0:38:31.88:69,0,32	0/1:25,0:25:73.33:223,0,73	1/1:10,0:9:3.01:47,3,0	1/1:13,0:13:6.02:104,6,0	0/1:43,0:43:99:369,0,117	1/1:24,0:23:18.04:262,18,0	0/0:45,0:44:42.55:0,43,957	./.	1/1:21,0:20:17.71:271,18,0	0/0:41,0:41:50.10:0,50,1088	0/1:22,12:34:19.42:409,0,19	1/1:22,0:23:39.09:566,39,0	1/1:13,0:12:23.44:374,23,0
chr10	29139884	.	CT	C	66.64	PASS	AB=0.684;AC=1;AF=0.018;AN=56;BaseQRankSum=2.781;DP=792;FS=1.540;HRun=1;HaplotypeScore=125.0591;InbreedingCoeff=-0.0322;MQ=53.49;MQ0=22;MQRankSum=-0.050;QD=5.13;ReadPosRankSum=-3.020;VQSLOD=-0.6290;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,1:32:28.06:0,28,529	0/0:16,0:16:42.74:0,43,586	0/0:3,0:1:3.01:0,3,46	0/0:2,0:1:3.01:0,3,45	0/0:38,0:37:81.92:0,82,1242	0/0:31,0:28:59.56:0,60,896	0/0:14,0:11:18.94:0,19,264	0/0:34,0:24:75.21:0,75,1093	0/0:25,5:27:11.76:0,12,698	0/0:46,0:44:99:0,129,1945	0/0:23,0:22:48.14:0,48,733	0/0:32,0:31:81.72:0,82,1218	0/0:44,0:43:99:0,105,1656	0/0:34,0:32:69.16:0,69,1023	0/0:54,0:52:99:0,109,1310	0/0:35,0:35:68.10:0,68,881	0/0:31,0:29:56.36:0,56,695	0/1:7,6:11:99:141,0,148	0/0:12,0:10:27.06:0,27,367	0/0:43,0:42:99:0,112,1354	0/0:22,0:21:48.10:0,48,651	0/0:40,0:39:87.28:0,87,1333	0/0:27,0:26:24.07:0,24,346	0/0:22,0:20:38.88:0,39,489	0/0:37,0:36:72.22:0,72,1111	0/0:29,0:29:78.16:0,78,1021	0/0:27,0:26:66.10:0,66,778	0/0:13,0:13:33.02:0,33,360
chr10	29142606	.	C	CT	1186.54	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=1.602;DP=131;FS=1.376;HRun=1;HaplotypeScore=32.4242;InbreedingCoeff=0.3796;MQ=66.67;MQ0=0;MQRankSum=-3.148;QD=10.69;ReadPosRankSum=-0.266;VQSLOD=1.2918;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,6:10:9.14:66,9,0	1/1:1,0:1:2.80:13,3,0	0/0:9,0:5:5.54:0,6,47	0/0:8,0:10:24.03:0,24,129	1/1:2,2:4:2.74:12,3,0	1/1:3,3:5:11.08:53,11,0	1/1:2,7:9:24.56:113,25,0	1/1:6,1:7:7.82:77,8,0	1/1:0,1:1:2.68:11,3,0	1/1:0,3:3:9.01:86,9,0	1/1:4,0:4:7.64:33,8,0	1/1:1,0:1:2.50:9,2,0	1/1:3,0:3:5.85:34,6,0	1/1:1,4:5:13.76:81,14,0	1/1:1,2:3:7.90:43,8,0	1/1:4,1:4:11.20:58,11,0	1/1:4,1:5:13.24:59,13,0	1/1:1,0:1:2.22:7,2,0	1/1:4,0:3:8.45:41,8,0	1/1:2,3:5:13.46:81,13,0	1/1:0,3:3:7.95:32,8,0	1/1:1,1:2:5.30:24,5,0	1/1:4,0:4:5.90:40,6,0	1/1:3,3:6:11.30:66,11,0	1/1:5,4:9:6.97:80,7,0	1/1:2,5:7:17.50:146,18,0	1/1:1,1:2:3:29,3,0	1/1:1,0:1:2.80:13,3,0
chr10	29149525	.	A	AT	1549.10	PASS	AB=0.809;AC=8;AF=0.143;AN=56;BaseQRankSum=-6.097;DP=603;FS=9.997;HRun=8;HaplotypeScore=162.4368;InbreedingCoeff=0.6150;MQ=70.10;MQ0=0;MQRankSum=-7.193;QD=17.02;ReadPosRankSum=-3.900;VQSLOD=1.3672;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:12.76:0,13,56	0/0:6,0:6:11.12:0,11,31	0/1:15,5:19:94.52:95,0,99	0/1:6,2:9:52.56:53,0,61	0/0:18,0:18:30.72:0,31,91	0/0:23,0:22:26.67:0,27,96	0/0:17,0:17:0.41:0,0,39	0/0:30,0:30:17.84:0,18,136	1/1:6,10:16:41.66:400,42,0	0/0:32,0:32:33.44:0,33,209	0/0:22,0:22:38.89:0,39,144	0/0:22,0:22:17.58:0,18,97	0/0:33,0:32:23.37:0,23,106	0/0:19,0:19:22.64:0,23,83	0/0:22,0:22:36.24:0,36,107	0/0:25,0:25:39.08:0,39,127	1/1:7,26:33:80.14:778,80,0	1/1:2,11:13:36.08:376,36,0	0/0:19,0:19:25.30:0,25,120	0/0:30,0:30:40.16:0,40,146	0/0:8,0:8:10.59:0,11,30	0/0:19,0:19:16.49:0,16,66	0/0:31,0:31:27.03:0,27,176	0/0:11,0:11:12.02:0,12,41	0/0:27,0:27:47.79:0,48,150	0/0:26,0:26:58.03:0,58,228	0/0:35,0:34:27.94:0,28,111	0/0:11,0:11:11.65:0,12,31
chr10	29149534	.	G	GT	22769.20	PASS	AB=0.767;AC=54;AF=0.964;AN=56;BaseQRankSum=-3.338;DP=612;FS=17.012;HRun=8;HaplotypeScore=97.3583;InbreedingCoeff=-0.0361;MQ=71.07;MQ0=0;MQRankSum=-3.328;QD=37.20;ReadPosRankSum=2.007;VQSLOD=3.3044;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,25:28:66.22:978,66,0	1/1:0,8:8:21.07:303,21,0	0/1:14,8:21:16.97:474,0,17	0/1:9,3:12:12.82:212,0,13	1/1:0,20:20:54.14:776,54,0	1/1:0,20:19:51.17:763,51,0	1/1:0,17:17:45.15:674,45,0	1/1:1,26:27:78.23:1109,78,0	1/1:1,13:14:36.12:499,36,0	1/1:3,28:32:86.66:1265,87,0	1/1:0,22:22:63.21:923,63,0	1/1:2,20:22:66.20:963,66,0	1/1:1,30:30:84.28:1258,84,0	1/1:0,18:18:42.14:629,42,0	1/1:1,21:22:63.21:943,63,0	1/1:0,24:24:66.22:989,66,0	1/1:5,27:32:78.49:1009,78,0	1/1:0,11:11:33.11:466,33,0	1/1:1,18:19:54.18:802,54,0	1/1:0,29:29:81.19:1154,81,0	1/1:0,12:12:21.07:313,21,0	1/1:0,21:21:63.17:907,63,0	1/1:3,28:31:75.25:1119,75,0	1/1:0,15:15:33.11:494,33,0	1/1:1,29:30:66.22:989,66,0	1/1:1,24:25:72.24:1072,72,0	1/1:1,38:38:90.30:1328,90,0	1/1:0,9:9:24.08:360,24,0
chr10	29150406	.	T	TA	1744.18	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-8.116;DP=522;FS=3.206;HRun=8;HaplotypeScore=49.9871;InbreedingCoeff=0.9531;MQ=74.41;MQ0=0;MQRankSum=-1.684;QD=26.83;ReadPosRankSum=2.440;VQSLOD=4.4187;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,16:16:42.12:485,42,0	0/0:7,0:8:20.05:0,20,171	0/0:16,0:15:28.86:0,29,235	0/0:14,0:12:4.99:0,5,110	0/0:26,0:26:69.02:0,69,627	0/0:18,0:18:48.02:0,48,439	0/0:11,0:11:33.02:0,33,302	0/0:32,0:32:90.03:0,90,819	1/1:1,15:16:42.12:485,42,0	0/0:27,0:27:72.04:0,72,659	0/0:29,0:29:78.03:0,78,709	0/0:9,0:9:27:0,27,242	0/0:21,0:22:56.05:0,56,500	0/0:21,0:21:48.01:0,48,435	0/0:10,0:10:30.02:0,30,275	0/0:20,0:20:51.02:0,51,467	1/1:1,19:20:54.16:623,54,0	1/1:4,9:13:27.08:312,27,0	0/0:16,0:16:38.99:0,39,351	0/0:41,0:41:99:0,111,1007	0/0:18,0:18:48.02:0,48,439	0/0:15,0:15:42.02:0,42,384	0/0:18,0:18:45.02:0,45,412	0/0:5,0:5:12.01:0,12,110	0/0:20,0:20:54.02:0,54,494	0/0:22,0:23:65.06:0,65,577	0/0:32,0:32:80.95:0,81,723	0/0:6,0:6:18.01:0,18,165
chr10	29151932	.	A	AT	824.77	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=0.715;DP=463;FS=0.000;HRun=6;HaplotypeScore=56.1715;InbreedingCoeff=0.9618;MQ=60.02;MQ0=0;MQRankSum=-1.408;QD=28.44;ReadPosRankSum=1.044;VQSLOD=4.1044;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:24.05:0,24,245	0/0:5,0:5:15:0,15,144	0/0:14,0:14:26.89:0,27,246	0/0:12,0:11:9.47:0,9,226	0/0:13,0:13:32.66:0,33,336	0/0:14,0:14:33.07:0,33,336	0/0:13,0:13:33.07:0,33,337	0/0:30,0:30:78.15:0,78,786	1/1:1,11:12:36.08:436,36,0	0/0:25,0:25:65.99:0,66,671	0/0:24,0:24:51.10:0,51,520	0/0:19,0:19:47.81:0,48,489	0/0:14,0:14:42.10:0,42,428	0/0:14,0:14:39.09:0,39,398	0/0:17,0:17:42.09:0,42,428	0/0:17,0:17:48.10:0,48,483	1/1:1,10:11:30.10:377,30,0	1/1:3,3:6:12.04:151,12,0	0/0:22,0:21:63.14:0,63,642	0/0:31,0:31:90.20:0,90,918	0/0:11,0:11:27.05:0,27,269	0/0:8,0:8:24.05:0,24,245	0/0:22,0:22:50.95:0,51,520	0/0:14,0:14:42.10:0,42,428	0/0:16,0:16:45.10:0,45,458	0/0:23,0:23:66.14:0,66,669	0/0:34,0:34:84.18:0,84,857	0/0:10,0:10:30.04:0,30,298
chr10	29158091	.	T	TCAGC	700.15	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=-2.652;DP=528;FS=2.836;HRun=0;HaplotypeScore=85.1782;InbreedingCoeff=0.6009;MQ=58.14;MQ0=7;MQRankSum=-0.537;QD=7.07;ReadPosRankSum=-1.271;VQSLOD=2.1815;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:45.01:0,45,546	0/0:7,0:7:11.91:0,12,164	0/0:24,0:12:6:0,6,64	0/0:21,0:16:5.19:0,5,75	0/0:14,0:14:21.03:0,21,286	0/0:13,0:13:20.52:0,21,307	0/0:23,0:23:32.14:0,32,465	0/0:17,0:15:18:0,18,160	1/1:8,10:17:9.03:201,9,0	0/0:17,0:17:23.85:0,24,306	0/0:5,0:5:6.01:0,6,94	0/0:27,0:27:57.06:0,57,693	0/0:20,0:20:42.08:0,42,546	0/0:28,0:28:54.10:0,54,726	0/0:27,0:27:57.10:0,57,800	0/1:11,0:11:58.21:58,0,129	1/1:11,23:35:14.80:360,15,0	1/1:10,24:35:8.54:216,9,0	0/0:10,0:10:3.61:0,4,32	0/0:9,0:9:9.02:0,9,109	0/0:41,0:40:63.02:0,63,780	0/0:10,0:10:15.04:0,15,217	0/0:4,0:4:9.03:0,9,142	0/0:41,0:41:90:0,90,1270	0/0:8,0:8:15.05:0,15,238	0/0:9,0:8:8.54:0,9,141	0/0:13,0:13:9.03:0,9,140	0/0:12,0:12:30.10:0,30,454
chr10	29161741	.	A	AGT	2281.76	PASS	AB=0.581;AC=5;AF=0.089;AN=56;BaseQRankSum=-6.958;DP=933;FS=3.140;HRun=0;HaplotypeScore=121.1998;InbreedingCoeff=0.8785;MQ=68.95;MQ0=6;MQRankSum=-3.052;QD=26.23;ReadPosRankSum=1.624;VQSLOD=4.7329;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:28:57.16:0,57,683	0/0:9,0:10:20.90:0,21,234	0/0:43,0:25:26.28:0,26,248	0/0:45,0:36:52.16:0,52,532	0/0:34,0:34:93.28:0,93,1124	0/0:30,0:30:66.21:0,66,806	0/0:17,0:18:38.95:0,39,453	0/0:35,0:35:75.17:0,75,869	1/1:8,19:28:20.52:839,21,0	0/0:32,0:32:69.03:0,69,799	0/0:18,0:18:51.16:0,51,623	0/0:49,0:52:99:0,123,1406	0/0:51,0:51:99:0,120,1461	0/0:44,0:45:81.78:0,82,1299	0/0:48,0:49:99:0,132,1564	0/0:42,0:42:90.27:0,90,1087	0/1:10,26:35:1.04:997,0,1	1/1:11,12:22:36.12:574,36,0	0/0:22,0:22:38.58:0,39,424	0/0:27,0:28:69.01:0,69,794	0/0:49,0:53:99:0,138,1571	0/0:22,0:22:48.14:0,48,575	0/0:25,1:27:17.37:0,17,685	0/0:47,0:48:99:0,117,1306	0/0:22,0:23:56.99:0,57,660	0/0:41,0:41:99:0,102,1246	0/0:31,0:33:77.91:0,78,906	0/0:17,0:17:28.32:0,28,330
chr10	29162365	.	TTGTGTG	T	1117.37	PASS	AB=0.890;AC=38;AF=0.792;AN=48;BaseQRankSum=1.048;DP=697;FS=1.380;HRun=0;HaplotypeScore=141.7790;InbreedingCoeff=0.0700;MQ=57.24;MQ0=49;MQRankSum=-0.389;QD=2.20;ReadPosRankSum=1.508;VQSLOD=2.4845;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:36,0:33:3.01:42,3,0	1/1:20,0:19:0.47:1,0,0	./.	0/0:47,0:24:0:0,0,0	./.	1/1:12,3:16:5.96:46,6,0	1/1:28,1:29:11.87:126,12,0	0/0:26,0:19:0.89:0,1,2	0/0:28,0:27:2.95:0,3,28	1/1:16,0:16:3.48:42,3,0	./.	1/1:25,0:25:14.94:193,15,0	0/1:17,0:17:6.70:7,0,32	1/1:25,0:25:3:27,3,0	1/1:15,5:20:9.36:162,9,0	1/1:24,0:34:4.47:24,4,0	0/1:21,0:36:43.44:116,0,43	1/1:20,0:20:0.47:1,0,0	0/1:22,1:20:50.90:53,0,51	0/1:8,0:8:19.89:24,0,20	1/1:46,0:43:5.87:90,6,0	1/1:8,0:10:2.99:24,3,0	1/1:16,2:18:3.44:21,3,0	1/1:34,8:40:1.97:7,2,0	1/1:19,0:19:5.71:40,6,0	1/1:17,1:17:6.02:102,6,0	1/1:10,3:12:2.09:84,2,0	./.
chr10	29165179	.	CTTCCTCCT	C	1098.27	PASS	AB=0.778;AC=5;AF=0.089;AN=56;BaseQRankSum=4.040;DP=502;FS=0.794;HRun=0;HaplotypeScore=138.9044;InbreedingCoeff=0.6827;MQ=58.98;MQ0=15;MQRankSum=-3.873;QD=35.43;ReadPosRankSum=-0.860;VQSLOD=3.2510;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:69.24:0,69,2380	0/0:8,0:8:24.08:0,24,881	0/0:42,0:11:10.57:0,11,945	0/0:42,0:20:7.02:0,7,879	0/0:16,0:16:39.60:0,40,1323	0/0:12,0:12:33.11:0,33,1323	0/0:29,0:28:84.27:0,84,3145	0/0:21,0:21:62.67:0,63,1802	1/1:7,5:13:13.85:627,14,0	0/0:14,0:13:39.13:0,39,1457	0/0:14,0:14:35.13:0,35,974	0/0:19,0:19:54.18:0,54,2134	0/0:20,0:20:57.65:0,58,2161	0/0:13,0:13:39.13:0,39,1434	0/0:8,0:8:24.08:0,24,1071	0/0:16,0:16:48.16:0,48,1994	1/1:4,4:10:8.12:464,8,0	0/1:5,1:7:77.08:126,0,77	0/0:18,0:16:48.15:0,48,1330	0/0:11,0:11:29.64:0,30,973	0/0:40,0:39:99:0,105,4120	0/0:8,0:8:24.08:0,24,1072	0/0:14,0:14:39.12:0,39,1518	0/0:26,0:26:75.26:0,75,2905	0/0:23,0:22:68.26:0,68,2606	0/0:14,0:14:42.14:0,42,1652	0/0:7,0:7:21.07:0,21,823	0/0:6,0:6:14.08:0,14,433
chr10	29165193	.	CTCCT	C	404.73	PASS	AB=0.965;AC=15;AF=0.268;AN=56;BaseQRankSum=-4.808;DP=521;FS=4.487;HRun=0;HaplotypeScore=107.1969;InbreedingCoeff=-0.2003;MQ=53.06;MQ0=20;MQRankSum=-5.737;QD=2.39;ReadPosRankSum=-7.355;VQSLOD=-0.7299;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:25:19.20:0,19,537	0/1:7,0:7:0.06:0,0,140	0/0:58,0:13:35.89:0,36,579	0/0:43,0:12:26.80:0,27,317	0/0:15,0:15:3.77:0,4,295	0/1:15,0:15:5.04:5,0,274	0/0:26,0:25:18.39:0,18,594	0/1:21,0:21:34.37:34,0,366	0/1:5,5:9:17.49:147,0,17	0/0:13,0:13:32.87:0,33,442	0/1:11,0:11:6.98:7,0,156	0/0:18,0:18:16.63:0,17,392	0/0:18,0:18:4.56:0,5,361	0/0:13,0:13:2.39:0,2,164	0/1:13,0:13:36.97:37,0,167	0/0:16,0:16:38.91:0,39,499	1/1:8,4:13:2.16:204,2,0	0/1:6,1:7:42.17:42,0,75	0/0:19,0:17:16.85:0,17,352	0/1:10,0:10:4:4,0,184	0/0:46,0:45:8.67:0,9,1074	0/1:12,0:12:1.09:1,0,194	0/1:11,0:11:14.90:15,0,81	0/0:23,0:23:50.34:0,50,725	0/1:23,0:22:32.42:32,0,395	0/0:17,0:17:21.57:0,22,403	0/1:10,0:10:3.92:4,0,118	0/1:6,0:5:8.96:9,0,71
chr10	29165411	.	TC	T	1790.81	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.125;DP=699;FS=0.000;HRun=5;HaplotypeScore=71.2125;InbreedingCoeff=0.9405;MQ=82.88;MQ0=0;MQRankSum=-2.443;QD=25.95;ReadPosRankSum=2.772;VQSLOD=3.1783;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,123,1574	0/0:12,0:12:33.11:0,33,446	0/0:26,0:26:70.43:0,70,907	0/0:14,0:14:37.37:0,37,441	0/0:24,0:24:69.11:0,69,892	0/0:27,0:27:75.22:0,75,982	0/0:25,0:25:64.16:0,64,891	0/0:35,0:35:99:0,99,1232	1/1:2,24:26:63.16:712,63,0	0/0:30,0:30:87.27:0,87,1123	0/0:14,0:14:42.14:0,42,568	0/0:34,0:34:99:0,99,1322	0/0:33,1:34:59.35:0,59,1060	0/0:29,0:29:84.21:0,84,1055	0/0:29,0:29:81.26:0,81,1080	0/0:21,0:21:57.18:0,57,757	1/1:3,26:29:69.20:781,69,0	1/1:1,13:14:39.11:441,39,0	0/0:26,0:26:78.23:0,78,1014	0/0:34,0:34:90.25:0,90,1154	0/0:32,0:32:90.25:0,90,1154	0/0:22,0:22:66.21:0,66,877	0/0:21,0:21:63.15:0,63,814	0/0:36,0:36:99:0,102,1332	0/0:18,0:18:54.16:0,54,702	0/0:26,0:26:74.83:0,75,969	0/0:18,0:18:51.17:0,51,689	0/0:1,0:1:3.01:0,3,41
chr10	29166279	.	T	TTAAAA	1216.34	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-3.101;DP=538;FS=0.923;HRun=0;HaplotypeScore=109.1605;InbreedingCoeff=0.9132;MQ=70.75;MQ0=0;MQRankSum=-3.491;QD=55.29;ReadPosRankSum=-0.363;VQSLOD=3.5465;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,18:22:51.09:1311,51,0	0/0:7,0:7:15.05:0,15,261	0/0:15,0:15:36.08:0,36,546	0/0:9,0:8:14.87:0,15,232	0/0:36,0:36:96.27:0,96,1694	0/0:21,0:21:57.19:0,57,1127	0/0:11,0:11:27.09:0,27,562	0/0:33,0:33:87.27:0,87,1619	0/0:20,0:20:57.19:0,57,1142	0/0:23,0:23:66.22:0,66,1296	0/0:21,0:21:54.17:0,54,1005	0/0:23,0:23:63.21:0,63,1268	0/0:15,0:15:39.11:0,39,680	0/0:12,0:12:33.11:0,33,612	0/0:20,0:20:57.15:0,57,954	0/0:14,0:14:36.12:0,36,728	0/0:19,0:19:51.16:0,51,978	0/0:27,0:27:72.20:0,72,1323	0/0:17,0:17:51.16:0,51,970	0/0:39,0:39:99:0,114,2224	0/0:10,0:10:27.08:0,27,476	0/0:9,0:9:27.05:0,27,420	0/0:24,0:24:66.22:0,66,1219	0/0:5,0:5:9.03:0,9,189	0/0:21,0:21:57.18:0,57,1024	0/0:25,0:25:63.20:0,63,1096	0/0:30,0:30:87.29:0,87,1641	0/0:10,0:10:27.09:0,27,566
chr10	29173157	.	ATC	A	508.33	PASS	AB=0.967;AC=18;AF=0.321;AN=56;BaseQRankSum=6.369;DP=348;FS=1.485;HRun=0;HaplotypeScore=62.4655;InbreedingCoeff=-0.2897;MQ=78.91;MQ0=4;MQRankSum=-1.967;QD=2.33;ReadPosRankSum=6.974;VQSLOD=0.9148;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:63.17:0,63,901	0/0:2,0:2:0.43:0,0,20	0/0:16,0:13:18.61:0,19,226	0/0:15,0:9:13.93:0,14,160	0/1:17,0:16:12.16:12,0,171	0/1:21,0:21:79.13:79,0,102	0/1:21,1:22:50.40:89,0,50	0/0:17,0:17:7.33:0,7,226	0/0:12,0:12:18.51:0,19,336	0/1:10,0:10:25.92:26,0,79	0/0:9,0:9:6.12:0,6,50	0/1:9,0:9:2.01:2,0,80	0/1:17,2:20:62.28:94,0,62	0/1:9,0:9:8.39:8,0,79	0/1:12,1:14:4.77:50,0,5	0/1:9,0:8:9.25:9,0,34	0/0:14,0:14:32.54:0,33,463	0/0:7,0:7:9.63:0,10,170	0/1:13,1:14:38.83:39,0,122	0/1:7,0:7:12.84:13,0,19	0/1:13,1:14:24.96:25,0,75	0/0:7,0:7:7.46:0,7,70	0/0:8,0:8:4.41:0,4,95	0/1:8,1:9:26.48:50,0,26	0/1:15,0:15:50.26:50,0,72	0/1:12,0:12:5.22:5,0,111	1/1:10,1:11:15.66:106,16,0	0/1:5,0:5:4.66:5,0,26
chr10	29173158	.	TCC	T	3695.66	PASS	AB=0.903;AC=46;AF=0.821;AN=56;BaseQRankSum=-3.276;DP=349;FS=5.238;HRun=13;HaplotypeScore=54.0886;InbreedingCoeff=0.6239;MQ=80.56;MQ0=5;MQRankSum=-1.948;QD=13.54;ReadPosRankSum=0.129;VQSLOD=1.9450;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:53.92:0,54,448	1/1:1,1:2:3:29,3,0	0/0:23,0:14:17.55:0,18,173	0/0:18,0:10:8.88:0,9,121	1/1:7,8:14:14.97:145,15,0	1/1:7,14:21:38.95:367,39,0	1/1:4,15:22:50.28:443,50,0	1/1:8,5:16:14.43:111,14,0	0/1:10,1:11:14.07:14,0,120	1/1:3,5:9:17.74:157,18,0	1/1:3,5:9:5.73:41,6,0	1/1:3,5:8:12:116,12,0	1/1:7,12:19:32.57:303,33,0	1/1:5,3:9:14.71:118,15,0	1/1:3,11:14:24.02:233,24,0	1/1:2,7:8:11.98:116,12,0	0/0:12,0:13:23.09:0,23,258	0/1:7,1:8:16.22:16,0,101	1/1:7,4:14:23.50:198,23,0	1/1:3,3:7:11.75:99,12,0	1/1:6,6:14:20.01:169,20,0	1/1:3,4:7:0.46:2,0,0	1/1:4,2:8:11.53:83,12,0	1/1:3,6:9:21.01:204,21,0	1/1:3,10:14:26.90:244,27,0	1/1:6,4:12:14.73:126,15,0	1/1:2,8:11:32.73:292,33,0	1/1:2,2:5:8.73:70,9,0
chr10	29173321	.	GTTCA	G	12129.58	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=1.615;DP=525;FS=1.829;HRun=0;HaplotypeScore=92.3815;InbreedingCoeff=0.9743;MQ=73.22;MQ0=3;MQRankSum=0.829;QD=28.41;ReadPosRankSum=2.547;VQSLOD=4.8811;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:16:19.31:0,19,294	1/1:1,5:6:11.93:164,12,0	0/0:13,0:12:12.03:0,12,211	0/0:19,0:17:17.20:0,17,339	1/1:1,21:22:50.66:687,51,0	1/1:4,16:20:30.10:493,30,0	1/1:5,15:20:30.10:493,30,0	1/1:15,14:28:41.81:473,42,0	0/0:16,0:16:36.10:0,36,776	1/1:5,24:29:72.06:1086,72,0	1/1:5,13:18:35.38:448,35,0	1/1:6,14:19:30.10:493,30,0	1/1:3,15:19:30.10:491,30,0	1/1:4,12:16:24.08:394,24,0	1/1:4,21:24:45.15:739,45,0	1/1:4,12:16:30.10:493,30,0	0/0:27,0:27:69.20:0,69,1549	0/0:7,0:7:14.99:0,15,241	1/1:9,6:15:17.97:233,18,0	1/1:8,25:33:66.05:1016,66,0	1/1:5,14:19:36.12:591,36,0	1/1:2,18:19:41.93:652,42,0	1/1:4,21:25:56.65:860,57,0	1/1:3,16:19:45.15:739,45,0	1/1:2,16:18:27.09:443,27,0	1/1:2,12:14:35.93:500,36,0	1/1:4,13:17:24.08:394,24,0	1/1:2,5:7:15.05:246,15,0
chr10	29175433	.	AACACACAC	A	2017.04	PASS	AB=0.908;AC=34;AF=0.654;AN=52;BaseQRankSum=2.558;DP=501;FS=2.592;HRun=0;HaplotypeScore=119.4498;InbreedingCoeff=0.2650;MQ=51.30;MQ0=27;MQRankSum=-2.589;QD=5.45;ReadPosRankSum=0.844;VQSLOD=2.2901;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:29:6.02:112,6,0	0/1:7,4:11:17.56:68,0,18	./.	./.	0/1:16,0:15:8.83:45,0,9	1/1:11,8:19:5.75:67,6,0	0/1:22,0:21:5.71:98,0,6	0/0:20,0:19:0:0,0,0	0/0:21,0:21:36.11:0,36,827	0/0:18,0:16:5.85:0,6,20	1/1:13,5:17:5.90:37,6,0	1/1:12,6:17:9.03:189,9,0	1/1:13,9:22:8.90:163,9,0	1/1:4,5:9:2.97:20,3,0	1/1:21,1:21:12.04:207,12,0	1/1:11,7:16:15.22:317,15,0	0/0:22,0:22:10.34:0,10,267	0/0:22,0:22:42.02:0,42,960	1/1:12,0:12:5.98:76,6,0	1/1:6,7:12:20.04:122,20,0	1/1:33,0:29:0.05:137,0,0	0/0:16,0:14:6.52:0,7,29	1/1:9,8:15:5.76:78,6,0	1/1:10,12:23:6.02:149,6,0	1/1:11,8:21:10.23:139,10,0	0/1:11,5:16:20.54:98,0,21	0/1:19,0:19:43.31:47,0,43	0/1:4,0:4:9.66:10,0,16
chr10	29177280	.	TTGTGTGTGTG	T	1267.75	PASS	AB=1.000;AC=25;AF=0.781;AN=32;BaseQRankSum=1.076;DP=482;FS=13.232;HRun=0;HaplotypeScore=128.8432;InbreedingCoeff=0.2719;MQ=67.94;MQ0=17;MQRankSum=0.061;QD=6.18;ReadPosRankSum=0.507;VQSLOD=1.2804;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:5.99:0,6,50	./.	./.	./.	1/1:20,4:24:8.93:127,9,0	1/1:21,0:21:3.01:53,3,0	1/1:15,2:15:2.80:66,3,0	0/0:20,0:19:0:0,0,0	./.	0/0:20,0:19:0.94:0,1,3	./.	1/1:14,2:14:2.32:84,2,0	./.	1/1:11,2:13:3.01:75,3,0	1/1:12,3:15:6.02:176,6,0	1/1:9,6:16:11.23:332,11,0	0/1:14,0:13:2.98:3,0,8	./.	./.	1/1:9,8:17:17.03:157,17,0	./.	1/1:12,0:12:2.90:16,3,0	./.	./.	1/1:7,6:13:5.99:126,6,0	1/1:18,2:20:3.54:96,4,0	./.	1/1:7,0:6:3.01:50,3,0
chr10	29177567	.	AT	A	8577.19	PASS	AB=1.000;AC=51;AF=0.911;AN=56;BaseQRankSum=-4.692;DP=513;FS=0.000;HRun=11;HaplotypeScore=59.2759;InbreedingCoeff=0.5772;MQ=70.22;MQ0=0;MQRankSum=-3.385;QD=17.12;ReadPosRankSum=3.410;VQSLOD=5.7446;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,18:24:23.38:323,23,0	1/1:1,8:9:23.97:197,24,0	0/0:9,0:8:13.53:0,14,114	0/1:9,0:8:17.82:18,0,55	1/1:3,32:35:77.30:681,77,0	1/1:6,31:37:89.88:739,90,0	1/1:3,13:16:9.96:288,10,0	1/1:8,19:28:55.93:446,56,0	1/1:0,0:18:28.52:82,29,0	1/1:3,16:19:47.94:394,48,0	1/1:6,26:32:80.89:665,81,0	1/1:2,16:18:41.94:345,42,0	1/1:1,22:23:59.93:493,60,0	1/1:3,14:17:39.42:321,39,0	1/1:3,12:15:32.94:271,33,0	1/1:0,13:13:35.96:296,36,0	1/1:2,0:13:22.40:65,22,0	1/1:0,0:12:22.41:65,22,0	1/1:4,17:22:52.01:406,52,0	1/1:5,15:20:12.95:313,13,0	1/1:2,5:7:11.97:99,12,0	1/1:3,15:18:9.92:288,10,0	1/1:5,16:21:44.92:369,45,0	1/1:0,15:16:40.99:326,41,0	1/1:3,15:18:38.95:320,39,0	1/1:3,19:23:58.96:474,59,0	1/1:2,16:18:35.94:296,36,0	0/0:3,0:3:0:0,0,0
chr10	29178117	.	GC	G	7137.02	PASS	AC=42;AF=0.778;AN=54;BaseQRankSum=0.859;DP=501;FS=12.665;HRun=9;HaplotypeScore=67.1710;InbreedingCoeff=0.9445;MQ=79.78;MQ0=0;MQRankSum=-0.262;QD=17.71;ReadPosRankSum=1.295;VQSLOD=4.1190;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:24:26.04:0,26,130	1/1:2,9:11:24.01:219,24,0	0/0:15,0:16:29.06:0,29,272	0/0:9,1:10:4.20:0,4,150	1/1:9,11:20:21.98:288,22,0	1/1:4,16:20:45.02:412,45,0	1/1:1,8:9:18:165,18,0	1/1:4,23:27:65.97:588,66,0	0/0:18,0:18:45.10:0,45,497	1/1:5,14:19:39:356,39,0	1/1:4,18:22:47.95:431,48,0	1/1:6,12:18:36:329,36,0	1/1:10,22:32:35.03:447,35,0	1/1:5,13:18:42:382,42,0	1/1:10,19:29:50.99:466,51,0	1/1:5,23:28:53.99:494,54,0	0/0:20,0:20:51.15:0,51,588	0/0:10,0:10:24.04:0,24,261	1/1:3,9:12:23.96:209,24,0	1/1:4,12:16:32.93:292,33,0	1/1:8,21:29:57.90:523,58,0	1/1:4,4:8:11.97:105,12,0	1/1:5,11:16:26.98:247,27,0	1/1:1,11:12:30.01:274,30,0	1/1:8,7:15:7.92:176,8,0	1/1:6,12:18:32.96:295,33,0	1/1:3,21:24:48.02:439,48,0	./.
chr10	29178717	.	G	GAT	461.06	PASS	AB=0.955;AC=16;AF=0.286;AN=56;BaseQRankSum=8.889;DP=716;FS=12.207;HRun=0;HaplotypeScore=267.3749;InbreedingCoeff=-0.3139;MQ=53.44;MQ0=2;MQRankSum=-6.673;QD=1.19;ReadPosRankSum=-6.026;VQSLOD=0.0625;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,119,1825	0/1:5,1:6:28.25:28,0,56	0/0:33,0:29:80.43:0,80,1267	0/0:31,0:26:72.15:0,72,1080	0/1:27,0:27:8.37:8,0,254	0/1:24,3:27:60.19:60,0,114	0/1:25,2:26:31.99:32,0,333	0/0:32,0:26:36.89:0,37,768	0/0:41,0:41:63.21:0,63,492	0/1:36,2:38:33.04:33,0,721	0/1:26,1:27:23.90:24,0,228	0/0:21,0:21:14.36:0,14,142	0/1:32,0:32:57.12:57,0,324	0/1:21,0:21:23.17:23,0,245	0/1:38,3:41:85.37:85,0,344	0/0:21,2:23:2.48:0,2,298	0/0:13,0:13:29.90:0,30,254	0/0:16,0:16:4.80:0,5,194	0/1:23,2:24:82.92:83,0,488	0/1:27,0:27:14.95:15,0,376	0/0:31,1:32:19.47:0,19,285	0/1:16,1:17:5.14:5,0,306	0/0:14,2:16:6.91:0,7,229	1/1:12,1:13:1.45:10,1,0	0/1:24,0:24:99:100,0,119	0/0:28,0:28:19.52:0,20,546	0/1:34,1:35:47.63:48,0,531	0/0:1,0:1:3.01:0,3,46
chr10	29178718	.	G	GA	240.16	PASS	AB=0.933;AC=14;AF=0.250;AN=56;BaseQRankSum=14.927;DP=729;FS=25.403;HRun=0;HaplotypeScore=264.7659;InbreedingCoeff=-0.2024;MQ=53.70;MQ0=2;MQRankSum=-9.525;QD=0.69;ReadPosRankSum=5.608;VQSLOD=0.9553;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,115,1573	0/1:5,1:6:2.32:2,0,55	0/0:34,0:30:87.20:0,87,1143	0/0:32,0:27:71.94:0,72,951	0/0:27,0:27:4.38:0,4,187	0/1:24,3:27:20.49:20,0,59	0/1:26,2:27:0.64:1,0,262	0/0:32,0:26:8.49:0,8,587	0/0:29,0:41:43.59:0,44,396	0/1:38,2:40:69.67:70,0,556	0/1:28,1:29:42.53:43,0,160	0/1:15,0:22:24.08:24,0,91	0/1:33,0:33:36.38:36,0,264	0/1:21,0:21:3.96:4,0,189	0/1:38,3:41:81.74:82,0,254	0/0:19,2:22:8.94:0,9,206	0/0:12,0:13:28.54:0,29,178	0/0:12,0:16:12.64:0,13,162	0/1:23,2:24:24.76:25,0,384	0/0:28,0:28:13.53:0,14,341	0/0:31,1:32:6.95:0,7,192	0/0:16,1:17:7.52:0,8,251	0/0:15,2:17:13.83:0,14,190	1/1:12,1:13:3.28:9,3,0	0/1:25,0:25:53.75:54,0,81	0/0:28,0:28:13.10:0,13,423	0/1:35,1:36:11.80:12,0,436	0/0:1,0:1:3.01:0,3,37
chr10	29178720	.	G	GAT	3898.51	PASS	AB=0.821;AC=26;AF=0.464;AN=56;BaseQRankSum=13.789;DP=731;FS=8.178;HRun=0;HaplotypeScore=262.1749;InbreedingCoeff=-0.4040;MQ=52.90;MQ0=2;MQRankSum=-10.203;QD=6.96;ReadPosRankSum=2.368;VQSLOD=2.0960;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,118,1837	0/1:4,1:5:3.76:61,0,4	0/0:33,0:29:84.26:0,84,1298	0/0:32,0:27:36.99:0,37,1068	0/1:18,10:28:55.33:73,0,55	0/1:18,9:27:4.15:273,0,4	0/1:25,2:26:89.31:89,0,91	0/0:33,0:27:20.05:0,20,276	0/1:40,0:40:64.07:64,0,184	0/1:34,7:42:99:401,0,195	0/1:21,8:29:79.85:80,0,82	0/1:14,9:23:1.06:205,0,1	0/1:22,11:33:65.18:331,0,65	0/1:16,6:22:69.22:107,0,69	1/1:26,16:42:16.93:517,17,0	0/1:14,7:21:38.69:233,0,39	0/1:13,0:13:25.15:25,0,72	0/1:16,0:16:64.58:65,0,99	0/1:21,4:24:99:212,0,153	0/1:22,6:28:73.23:140,0,73	0/0:30,1:31:12.54:0,13,120	0/1:13,4:17:11.81:12,0,105	0/1:13,5:18:55.49:55,0,63	1/1:10,3:13:5.75:42,6,0	0/1:13,12:25:22.03:305,0,22	0/1:20,9:29:99:301,0,192	0/1:28,8:36:99:306,0,171	1/1:1,0:1:0.47:1,0,0
chr10	29178721	.	G	GATGATGA	13978.06	PASS	AB=0.860;AC=33;AF=0.589;AN=56;BaseQRankSum=11.255;DP=729;FS=27.758;HRun=0;HaplotypeScore=275.5256;InbreedingCoeff=-0.1786;MQ=53.68;MQ0=2;MQRankSum=-9.183;QD=22.51;ReadPosRankSum=6.893;VQSLOD=2.9962;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,111,2820	1/1:4,1:5:0.97:211,1,0	0/0:33,0:29:83.76:0,84,1607	0/0:32,0:28:71.92:0,72,1466	0/1:18,10:28:64.83:74,0,65	1/1:18,9:27:42.71:1016,43,0	1/1:25,2:26:9.80:538,10,0	0/1:34,0:28:93.30:357,0,93	0/1:40,0:40:56.81:57,0,225	1/1:31,6:39:18.26:1507,18,0	0/1:21,8:29:34.70:279,0,35	1/1:14,9:23:14.89:825,15,0	1/1:22,11:33:15.88:1197,16,0	0/1:16,6:22:55.41:271,0,55	1/1:24,16:40:12.08:1687,12,0	0/1:15,7:22:14.80:848,0,15	0/1:13,0:13:17.72:18,0,122	0/1:16,0:16:60.25:142,0,60	0/1:22,4:25:71.82:695,0,72	0/1:21,5:27:76.20:254,0,76	0/1:32,1:33:17.22:163,0,17	0/1:14,4:18:26.27:152,0,26	0/1:13,5:18:16.10:297,0,16	1/1:10,3:13:2.83:94,3,0	1/1:13,12:25:19.95:982,20,0	0/1:20,9:29:6.33:1270,0,6	0/1:26,7:34:16.79:1043,0,17	0/0:1,0:1:2.90:0,3,16
chr10	29178723	.	G	GATGATGATG	23932.40	PASS	AC=48;AF=0.889;AN=54;BaseQRankSum=2.193;DP=736;FS=1.043;HRun=0;HaplotypeScore=272.7118;InbreedingCoeff=0.7948;MQ=54.50;MQ0=2;MQRankSum=-6.996;QD=38.48;ReadPosRankSum=2.043;VQSLOD=4.3497;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:44:99:0,105,2507	1/1:5,0:5:12.04:388,12,0	0/0:33,0:29:50.61:0,51,1042	0/0:36,0:32:30.25:0,30,850	1/1:29,0:29:2.34:138,2,0	1/1:29,0:29:54.19:1775,54,0	1/1:27,0:26:42.10:938,42,0	1/1:34,0:28:36.11:654,36,0	1/1:40,0:40:20.26:250,20,0	1/1:39,0:39:96.28:2421,96,0	1/1:29,0:29:20.96:433,21,0	1/1:24,0:24:36.09:1292,36,0	1/1:33,0:33:60.65:1984,61,0	1/1:17,4:22:12.01:469,12,0	1/1:40,0:40:84.26:2706,84,0	1/1:22,0:22:42.14:1414,42,0	1/1:12,0:12:2.28:95,2,0	1/1:15,0:15:21.99:332,22,0	1/1:26,0:25:39.13:1231,39,0	1/1:25,0:25:24.03:520,24,0	1/1:33,0:33:27.05:428,27,0	1/1:19,0:19:18.06:362,18,0	1/1:18,0:18:17.79:500,18,0	1/1:13,0:13:2.26:137,2,0	1/1:25,0:25:48.08:1590,48,0	1/1:29,0:29:66.20:2076,66,0	1/1:34,0:34:63.16:1801,63,0	./.
chr10	29178731	.	T	TGATGATGAT	24146.25	PASS	AC=48;AF=0.889;AN=54;BaseQRankSum=1.953;DP=742;FS=1.629;HRun=0;HaplotypeScore=279.8692;InbreedingCoeff=0.8146;MQ=63.42;MQ0=1;MQRankSum=-7.727;QD=38.82;ReadPosRankSum=3.044;VQSLOD=4.1855;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,108,2514	1/1:4,0:4:12.04:388,12,0	0/0:35,0:33:50.61:0,51,1042	0/0:42,0:38:30.25:0,30,850	1/1:20,6:28:2.34:138,2,0	1/1:28,0:28:51.17:1637,51,0	1/1:27,0:26:26.06:756,26,0	1/1:35,0:29:42.13:750,42,0	1/1:39,0:39:20.26:250,20,0	1/1:36,0:36:96.28:2421,96,0	1/1:28,0:28:20.96:433,21,0	1/1:23,0:23:36.09:1292,36,0	1/1:34,0:34:63.66:2122,64,0	1/1:21,0:21:12.01:469,12,0	1/1:43,0:43:84.26:2706,84,0	1/1:22,0:22:42.14:1414,42,0	1/1:12,0:12:2.28:95,2,0	1/1:15,0:15:24.03:338,24,0	1/1:28,0:27:48.16:1371,48,0	1/1:24,0:24:24.03:520,24,0	1/1:32,0:32:30.07:479,30,0	1/1:18,0:18:18.06:362,18,0	1/1:21,0:21:17.79:500,18,0	1/1:14,0:15:5.26:164,5,0	1/1:26,0:26:48.08:1590,48,0	1/1:31,0:31:72.18:2151,72,0	1/1:32,0:32:63.16:1801,63,0	./.
chr10	29178955	.	G	GTT	2227.60	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.812;DP=681;FS=1.899;HRun=4;HaplotypeScore=82.0397;InbreedingCoeff=0.9549;MQ=72.08;MQ0=0;MQRankSum=-4.184;QD=37.76;ReadPosRankSum=0.581;VQSLOD=3.1396;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,123,1609	0/0:6,0:6:18.06:0,18,240	0/0:12,0:12:33.11:0,33,434	0/0:12,0:12:5.76:0,6,317	0/0:34,0:34:96.30:0,96,1263	0/0:14,0:14:36.12:0,36,480	0/0:20,0:20:57.18:0,57,757	0/0:37,0:37:99:0,102,1348	1/1:4,19:23:48.16:853,48,0	0/0:32,0:32:77.90:0,78,1021	0/0:30,0:30:84.26:0,84,1105	0/0:21,0:21:63.21:0,63,840	0/0:27,0:27:72.23:0,72,959	0/0:18,0:18:54.18:0,54,719	0/0:34,0:34:87.28:0,87,1158	0/0:31,0:31:84.24:0,84,1090	1/1:3,25:28:66.23:1176,66,0	1/1:0,8:8:21.03:341,21,0	0/0:31,0:31:84.27:0,84,1120	0/0:42,0:42:99:0,117,1510	0/0:21,0:21:57.17:0,57,745	0/0:31,0:31:87.28:0,87,1160	0/0:26,0:26:69.23:0,69,920	0/0:12,0:11:33.11:0,33,440	0/0:27,0:27:81.25:0,81,1064	0/0:28,0:28:81.26:0,81,1080	0/0:28,0:28:78.25:0,78,1039	0/0:6,0:6:18.06:0,18,240
chr10	29184547	.	TTC	T	21910	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=11.101;DP=701;FS=1.235;HRun=0;HaplotypeScore=132.0872;InbreedingCoeff=0.9823;MQ=76.20;MQ0=0;MQRankSum=-4.381;QD=38.92;ReadPosRankSum=3.498;VQSLOD=6.5763;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:81.23:0,81,1339	1/1:0,13:13:33.11:505,33,0	0/0:23,0:20:16.78:0,17,656	0/0:26,0:26:7.79:0,8,638	1/1:1,24:25:72.05:995,72,0	1/1:0,26:26:66.22:1008,66,0	1/1:2,20:22:57.15:845,57,0	1/1:0,28:28:84.24:1239,84,0	0/0:23,0:23:69.20:0,69,1151	1/1:1,27:28:81.26:1211,81,0	1/1:0,38:38:99:1514,108,0	1/1:0,21:21:54.18:824,54,0	1/1:1,26:27:75.23:1122,75,0	1/1:0,26:26:60.20:914,60,0	1/1:1,32:33:75.25:1145,75,0	1/1:0,27:27:69.23:1054,69,0	0/0:19,0:19:54.11:0,54,884	0/0:14,0:14:36.10:0,36,615	1/1:0,22:22:65.63:902,66,0	1/1:2,32:34:46.29:1322,46,0	1/1:1,18:19:45.15:688,45,0	1/1:1,15:16:36.12:550,36,0	1/1:0,28:28:78.26:1193,78,0	1/1:0,15:15:33.07:477,33,0	1/1:0,37:37:87.30:1331,87,0	1/1:1,35:36:99:1537,102,0	1/1:1,26:27:66.18:982,66,0	1/1:0,15:15:36.12:550,36,0
chr10	29184638	.	TCAC	T	440.71	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.150;DP=816;FS=3.699;HRun=0;HaplotypeScore=182.1311;InbreedingCoeff=0.9653;MQ=67.56;MQ0=1;MQRankSum=-3.432;QD=15.74;ReadPosRankSum=-0.468;VQSLOD=3.0085;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,27:28:36.51:535,37,0	0/0:18,0:18:36.12:0,36,823	0/0:31,0:28:72.98:0,73,1605	0/0:44,0:41:99:0,102,2275	0/0:38,0:38:84.25:0,84,1837	0/0:19,0:19:42.10:0,42,870	0/0:30,0:30:63.20:0,63,1394	0/0:37,0:37:99:0,102,2063	0/0:37,0:37:99:0,108,2352	0/0:26,0:26:75.21:0,75,1655	0/0:24,0:24:63.12:0,63,1316	0/0:33,0:33:74.92:0,75,1673	0/0:43,0:43:82.09:0,82,1901	0/0:37,0:37:78.16:0,78,1601	0/0:40,0:40:65.69:0,66,1450	0/0:37,0:37:72.23:0,72,1593	0/0:26,0:26:69.50:0,70,1698	0/0:23,0:23:45.10:0,45,1201	0/0:19,0:19:48.15:0,48,1034	0/0:30,0:30:81.25:0,81,1764	0/0:26,0:26:27.09:0,27,597	0/0:31,0:31:75.08:0,75,1617	0/0:37,0:37:65.82:0,66,1451	0/0:19,0:19:21.07:0,21,467	0/0:24,0:24:51.14:0,51,1030	0/0:27,0:27:75.23:0,75,1648	0/0:26,0:25:60.20:0,60,1344	0/0:6,0:6:12.04:0,12,276
chr10	29184679	.	A	ATCC	18065.46	PASS	AB=1.000;AC=47;AF=0.839;AN=56;BaseQRankSum=5.816;DP=779;FS=5.195;HRun=0;HaplotypeScore=218.8202;InbreedingCoeff=0.5703;MQ=54.12;MQ0=0;MQRankSum=-12.104;QD=25.88;ReadPosRankSum=-2.807;VQSLOD=4.0274;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:28:80.86:81,0,86	1/1:4,9:13:14.92:260,15,0	0/0:28,0:24:35.06:0,35,425	0/0:28,0:27:48.28:0,48,591	1/1:6,24:30:38.67:708,39,0	1/1:4,19:23:48.16:954,48,0	1/1:12,15:27:30.10:571,30,0	1/1:14,20:36:71.80:940,72,0	0/1:42,0:42:99:110,0,428	1/1:17,16:33:66.19:1198,66,0	1/1:9,15:24:33.11:660,33,0	1/1:7,21:28:54.15:1058,54,0	1/1:6,28:34:54.14:1036,54,0	1/1:8,26:34:54.08:1054,54,0	1/1:4,29:33:42.14:855,42,0	1/1:9,28:38:75.09:1429,75,0	0/0:23,0:23:10.01:0,10,274	0/1:27,0:27:68.73:69,0,201	1/1:6,17:24:56.88:720,57,0	1/1:17,16:33:68.23:1147,68,0	1/1:11,19:30:18.06:356,18,0	1/1:7,23:30:57.20:1138,57,0	1/1:5,21:26:36.12:707,36,0	1/1:8,17:25:18.03:318,18,0	1/1:5,15:21:22.51:610,23,0	1/1:9,23:33:71.96:1124,72,0	1/1:5,15:20:39.13:788,39,0	1/1:1,5:6:9.03:177,9,0
chr10	29185921	.	A	AT	15157.08	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-11.814;DP=499;FS=0.894;HRun=0;HaplotypeScore=45.3594;InbreedingCoeff=0.9534;MQ=70.08;MQ0=0;MQRankSum=0.087;QD=37.33;ReadPosRankSum=1.385;VQSLOD=4.4169;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:81.16:0,81,1064	1/1:0,7:7:21.07:300,21,0	0/0:16,0:16:44.78:0,45,551	0/0:7,0:7:18.01:0,18,222	1/1:0,34:34:95.91:1237,96,0	1/1:0,22:22:63.21:900,63,0	1/1:0,11:11:30.10:429,30,0	1/1:0,27:27:81.16:1029,81,0	0/0:14,0:14:39.11:0,39,499	1/1:1,32:33:96.21:1295,96,0	1/1:0,24:24:63.12:872,63,0	1/1:0,6:6:12.04:171,12,0	1/1:0,25:25:60.20:858,60,0	1/1:0,18:18:51.17:728,51,0	1/1:2,18:20:48.16:687,48,0	1/1:0,16:16:42.14:598,42,0	0/0:15,0:15:45.15:0,45,625	0/0:14,0:14:39.12:0,39,525	1/1:1,15:16:45.13:610,45,0	1/1:1,34:35:99:1408,102,0	1/1:0,6:6:15.05:214,15,0	1/1:0,2:2:3.01:43,3,0	1/1:0,15:15:36.12:511,36,0	1/1:0,11:12:27.09:374,27,0	1/1:0,21:21:45.15:643,45,0	1/1:0,20:20:57.18:795,57,0	1/1:0,24:24:66.22:943,66,0	1/1:0,12:12:36.12:513,36,0
chr10	29189179	.	GCA	G	13787.82	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-11.121;DP=645;FS=2.883;HRun=0;HaplotypeScore=94.4721;InbreedingCoeff=0.9575;MQ=60.85;MQ0=10;MQRankSum=0.825;QD=28.37;ReadPosRankSum=0.097;VQSLOD=6.1330;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:43:71.92:0,72,663	1/1:1,8:9:8.89:116,9,0	0/0:30,0:12:16.02:0,16,316	0/0:17,0:3:5.37:0,5,33	1/1:6,24:29:57.11:696,57,0	1/1:1,22:23:48.11:598,48,0	1/1:4,15:19:36.12:463,36,0	1/1:7,29:36:64.30:1071,64,0	0/0:4,0:26:60.01:0,60,527	1/1:0,25:25:72.20:895,72,0	1/1:0,22:22:60.19:772,60,0	1/1:0,18:18:42.14:540,42,0	1/1:1,17:17:45.15:578,45,0	1/1:4,13:17:39.13:499,39,0	1/1:4,17:21:45.15:579,45,0	1/1:2,15:17:39.13:502,39,0	0/0:7,0:26:39:0,39,347	0/0:3,0:16:20.05:0,20,166	1/1:4,6:9:18.06:232,18,0	1/1:2,27:29:75.24:964,75,0	1/1:4,24:28:51.15:642,51,0	1/1:1,28:29:66.17:830,66,0	1/1:1,18:19:42.02:540,42,0	1/1:4,27:31:57.18:733,57,0	1/1:2,22:24:60.19:771,60,0	1/1:1,28:29:78.21:967,78,0	1/1:3,22:25:42.12:532,42,0	1/1:1,6:7:21.07:270,21,0
chr10	29191140	.	CCTGTGTCTTT	C	2229.27	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.508;DP=652;FS=0.740;HRun=0;HaplotypeScore=189.5748;InbreedingCoeff=0.9562;MQ=75.18;MQ0=0;MQRankSum=-7.486;QD=47.43;ReadPosRankSum=2.877;VQSLOD=3.5591;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:81.28:0,81,3902	0/0:10,0:10:27.09:0,27,1026	0/0:24,0:23:60.12:0,60,2444	0/0:32,0:30:70.79:0,71,3354	0/0:25,0:25:66.23:0,66,3329	0/0:24,0:24:72.25:0,72,3292	0/0:25,0:25:60.21:0,60,3132	0/0:28,0:28:63.21:0,63,3091	1/1:1,19:20:51.18:1580,51,0	0/0:32,0:32:90.31:0,90,4527	0/0:22,0:22:63.22:0,63,3185	0/0:17,0:17:48.16:0,48,2324	0/0:22,0:22:60.21:0,60,2741	0/0:22,0:22:60.19:0,60,2763	0/0:33,0:33:99:0,99,4851	0/0:24,0:24:69.24:0,69,3555	1/1:2,15:17:21.07:675,21,0	1/1:4,6:10:5.75:108,6,0	0/0:28,0:28:78.25:0,78,3278	0/0:29,0:29:84.27:0,84,4081	0/0:22,0:22:60.21:0,60,2601	0/0:23,0:23:63.20:0,63,3014	0/0:14,0:14:42.14:0,42,1904	0/0:20,0:20:57.20:0,57,2789	0/0:25,0:25:69.22:0,69,2934	0/0:28,0:28:78.27:0,78,3805	0/0:40,0:39:99:0,120,5618	0/0:8,0:8:21.07:0,21,865
chr10	29191468	.	G	GA	5691.21	PASS	AC=44;AF=0.880;AN=50;BaseQRankSum=-1.381;DP=248;FS=79.888;HRun=0;HaplotypeScore=38.8003;InbreedingCoeff=0.5377;MQ=30.14;MQ0=38;MQRankSum=-0.875;QD=28.17;ReadPosRankSum=6.797;VQSLOD=0.4602;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,0:3:2.84:14,3,0	1/1:0,7:7:21.07:273,21,0	0/0:16,1:1:3.01:0,3,42	0/0:19,1:6:18.01:0,18,212	1/1:0,12:12:33.11:431,33,0	1/1:4,2:4:4.28:75,4,0	1/1:1,3:3:9.03:117,9,0	./.	1/1:4,4:5:12.04:156,12,0	1/1:4,17:18:51.64:674,52,0	1/1:1,13:13:36.12:462,36,0	1/1:2,5:6:13.33:191,13,0	1/1:1,5:5:15.05:194,15,0	1/1:3,6:8:15.89:227,16,0	1/1:5,5:8:9.91:185,10,0	1/1:2,8:8:24.08:313,24,0	1/1:1,1:1:3.01:39,3,0	./.	0/0:3,0:1:0.47:0,0,1	1/1:2,12:14:29.67:424,30,0	./.	1/1:2,13:15:29.62:416,30,0	1/1:3,9:12:15.84:263,16,0	1/1:0,1:1:3.01:38,3,0	1/1:1,11:12:31.36:429,31,0	1/1:4,3:5:14.94:159,15,0	1/1:4,15:18:41.09:574,41,0	1/1:0,1:1:3.01:38,3,0
chr10	29194440	.	TG	T	785.50	PASS	AB=0.629;AC=7;AF=0.125;AN=56;BaseQRankSum=9.728;DP=590;FS=14.046;HRun=1;HaplotypeScore=93.4342;InbreedingCoeff=0.7870;MQ=60.00;MQ0=56;MQRankSum=3.258;QD=9.03;ReadPosRankSum=2.203;VQSLOD=-0.0162;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:16,23:38:65.16:288,0,65	0/0:4,0:4:12.04:0,12,192	0/0:27,0:6:8.52:0,9,104	0/0:19,2:12:7.53:0,8,207	0/0:25,0:23:63.15:0,63,968	0/0:22,0:22:60.14:0,60,928	0/0:16,0:15:45.15:0,45,700	0/0:25,0:18:54.18:0,54,861	1/1:3,17:18:36.91:222,37,0	0/0:28,0:26:78.26:0,78,1232	0/0:21,0:21:63.08:0,63,945	0/0:15,0:15:42.14:0,42,668	0/0:19,0:19:48.03:0,48,703	0/0:24,0:24:66.01:0,66,923	0/0:26,0:25:63.21:0,63,1005	0/0:23,0:22:66.23:0,66,1053	1/1:3,17:20:17.90:270,18,0	1/1:2,6:8:23.54:153,24,0	0/0:14,0:11:33.11:0,33,527	0/0:24,0:24:69.21:0,69,1053	0/0:42,0:41:99:0,108,1652	0/0:17,0:14:39.13:0,39,618	0/0:12,0:12:36.12:0,36,574	0/0:29,0:26:69.24:0,69,1101	0/0:16,0:15:42.03:0,42,612	0/0:18,0:16:48.11:0,48,715	0/0:22,0:20:54.12:0,54,821	0/0:13,0:13:39.13:0,39,623
chr10	29194442	.	CCT	C	1847.19	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=9.132;DP=609;FS=9.434;HRun=0;HaplotypeScore=100.4521;InbreedingCoeff=0.7779;MQ=62.14;MQ0=59;MQRankSum=2.766;QD=16.06;ReadPosRankSum=1.540;VQSLOD=3.4055;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:40,0:39:19.02:679,19,0	0/0:4,0:4:6.02:0,6,97	0/0:27,1:6:4.54:0,5,26	0/1:26,0:14:10.55:11,0,78	0/0:27,0:24:51.17:0,51,822	0/0:22,0:22:51.14:0,51,776	0/0:15,1:15:2.45:0,2,522	0/0:25,0:18:24.08:0,24,389	1/1:21,0:19:39.04:443,39,0	0/0:29,1:28:32.60:0,33,984	0/0:21,0:21:51.16:0,51,800	0/0:16,0:16:39.10:0,39,605	0/0:22,0:22:44.81:0,45,723	0/0:26,0:26:54.18:0,54,868	0/0:26,0:25:54.18:0,54,869	0/0:23,0:22:63.22:0,63,1021	1/1:21,0:21:54.06:622,54,0	1/1:7,0:7:21.06:254,21,0	0/0:16,0:13:33.10:0,33,510	0/0:22,1:23:17.58:0,18,790	0/0:42,1:43:82.10:0,82,1425	0/0:17,0:14:33.11:0,33,535	0/0:12,0:12:33.11:0,33,533	0/0:28,0:25:60.20:0,60,972	0/0:16,0:15:24.07:0,24,360	0/0:18,0:16:36.07:0,36,554	0/0:21,0:19:45.05:0,45,646	0/0:13,0:13:36.12:0,36,584
chr10	29194443	.	CT	C	793.75	PASS	AB=0.820;AC=8;AF=0.143;AN=56;BaseQRankSum=9.990;DP=626;FS=17.470;HRun=1;HaplotypeScore=97.9174;InbreedingCoeff=0.7036;MQ=64.03;MQ0=62;MQRankSum=1.647;QD=6.51;ReadPosRankSum=2.281;VQSLOD=-0.5785;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:18,23:40:99:274,0,112	0/0:4,0:4:12.04:0,12,169	0/0:28,0:5:5.05:0,5,54	0/1:32,0:17:2.93:3,0,199	0/0:29,0:26:63.19:0,63,936	0/0:23,0:22:57.19:0,57,887	0/0:16,0:15:42.57:0,43,631	0/0:25,0:18:54.18:0,54,750	1/1:4,17:19:40.67:260,41,0	0/0:30,0:28:81.74:0,82,1233	0/0:22,0:22:57.19:0,57,887	0/0:17,0:17:48.11:0,48,694	0/0:22,0:22:48.12:0,48,722	0/0:26,0:26:63.19:0,63,939	0/0:26,0:25:63.21:0,63,972	0/0:25,0:24:69.22:0,69,1067	1/1:4,17:21:13.40:271,13,0	1/1:1,6:7:20.64:133,21,0	0/0:17,0:14:42.13:0,42,621	0/0:24,0:24:60.67:0,61,925	0/0:44,0:43:99:0,115,1658	0/0:17,0:14:39.13:0,39,600	0/0:12,0:12:36.12:0,36,563	0/0:28,0:25:72.20:0,72,1076	0/0:16,0:15:39.13:0,39,557	0/0:18,0:16:48.16:0,48,717	0/0:22,0:20:54.14:0,54,799	0/0:13,0:13:39.13:0,39,612
chr10	29194955	.	TGGG	T	451.53	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.086;DP=527;FS=0.799;HRun=3;HaplotypeScore=93.5259;InbreedingCoeff=0.8417;MQ=99.24;MQ0=0;MQRankSum=-7.747;QD=14.11;ReadPosRankSum=0.103;VQSLOD=0.1602;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,14:17:27.16:216,27,0	0/0:3,0:3:6.02:0,6,121	0/0:24,0:24:66.18:0,66,1487	0/0:33,0:33:90.52:0,91,2087	0/0:23,0:23:69.22:0,69,1593	0/0:23,0:23:69.24:0,69,1660	0/0:21,0:21:63.22:0,63,1546	0/0:32,0:32:93.32:0,93,2264	1/1:3,11:14:34.95:355,35,0	0/0:20,0:20:60.21:0,60,1452	0/0:21,0:21:63.22:0,63,1524	0/0:10,0:10:30.10:0,30,723	0/0:20,0:20:57.20:0,57,1380	0/0:24,0:24:72.25:0,72,1680	0/0:23,0:23:69.24:0,69,1674	0/0:15,0:15:45.15:0,45,1109	0/0:3,0:3:0.44:0,0,1	1/1:0,1:1:0.47:1,0,0	0/0:19,0:19:57.20:0,57,1400	0/0:37,0:37:99:0,109,2585	0/0:21,0:21:63.22:0,63,1553	0/0:17,0:17:51.17:0,51,1176	0/0:15,0:15:45.15:0,45,1109	0/0:10,0:10:30.10:0,30,715	0/0:16,0:16:48.13:0,48,1084	0/0:29,0:29:87.30:0,87,2144	0/0:29,0:29:87.30:0,87,2139	0/0:7,0:7:21.07:0,21,518
chr10	29194959	.	AAG	A	279.10	PASS	AC=4;AF=0.074;AN=54;BaseQRankSum=7.323;DP=517;FS=4.727;HRun=0;HaplotypeScore=82.5842;InbreedingCoeff=0.8186;MQ=99.49;MQ0=0;MQRankSum=-5.824;QD=11.16;ReadPosRankSum=0.562;VQSLOD=2.7195;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,14:14:9.57:135,10,0	0/0:1,0:1:3.01:0,3,61	0/0:24,0:24:66.20:0,66,1230	0/0:33,0:32:80.71:0,81,1692	0/0:21,0:21:63.19:0,63,1190	0/0:22,0:22:66.21:0,66,1303	0/0:22,0:22:66.23:0,66,1323	0/0:30,0:30:90.30:0,90,1780	1/1:0,11:11:32.78:258,33,0	0/0:20,0:20:60.20:0,60,1168	0/0:21,0:21:63.22:0,63,1279	0/0:12,0:12:33.11:0,33,670	0/0:20,0:20:60.21:0,60,1218	0/0:21,0:21:63.22:0,63,1280	0/0:22,0:22:66.23:0,66,1324	0/0:19,0:19:57.17:0,57,1076	./.	0/0:0,1:1:2.68:0,3,11	0/0:20,0:20:60.21:0,60,1204	0/0:36,0:36:99:0,105,2134	0/0:22,0:22:66.23:0,66,1305	0/0:18,0:18:54.19:0,54,1074	0/0:15,0:15:45.15:0,45,914	0/0:10,0:10:30.09:0,30,556	0/0:14,0:14:42.11:0,42,780	0/0:32,0:32:96.28:0,96,1829	0/0:29,0:29:87.29:0,87,1732	0/0:7,0:7:21.07:0,21,427
chr10	29194967	.	AATATAT	A	968.15	PASS	AC=6;AF=0.111;AN=54;BaseQRankSum=8.279;DP=526;FS=0.783;HRun=0;HaplotypeScore=125.7304;InbreedingCoeff=0.8960;MQ=96.76;MQ0=1;MQRankSum=-8.187;QD=37.24;ReadPosRankSum=-0.284;VQSLOD=3.3807;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,14:14:32.33:440,32,0	0/0:2,0:2:6.02:0,6,226	0/0:22,0:22:66.12:0,66,2087	0/0:34,0:33:99:0,99,3324	0/0:22,0:22:66.23:0,66,2381	0/0:22,0:22:66.22:0,66,2340	0/0:23,0:23:69.24:0,69,2554	0/0:36,0:36:99:0,108,3991	1/1:0,11:11:33.10:624,33,0	0/0:20,0:20:60.21:0,60,2226	0/0:22,0:22:66.23:0,66,2193	0/0:11,0:11:33.11:0,33,1152	0/0:20,0:20:60.20:0,60,2166	0/0:18,0:18:54.19:0,54,1964	0/0:24,0:24:72.23:0,72,2538	0/0:17,0:17:51.17:0,51,1834	./.	1/1:0,1:1:3.01:36,3,0	0/0:19,0:18:54.19:0,54,1939	0/0:34,0:34:98.93:0,99,3635	0/0:19,0:19:57.20:0,57,2146	0/0:20,0:20:60.21:0,60,2259	0/0:18,0:18:54.19:0,54,2007	0/0:9,0:9:27.09:0,27,948	0/0:16,0:15:45.15:0,45,1672	0/0:32,0:32:96.33:0,96,3516	0/0:33,0:33:99:0,99,3498	0/0:7,0:7:21.07:0,21,790
chr10	29195431	.	T	TA	14614.83	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-14.389;DP=638;FS=5.896;HRun=8;HaplotypeScore=72.0657;InbreedingCoeff=0.9764;MQ=63.86;MQ0=1;MQRankSum=-0.225;QD=28.71;ReadPosRankSum=-0.034;VQSLOD=5.1232;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:32:53.43:0,53,157	1/1:4,8:12:24.07:277,24,0	0/0:22,0:22:40.81:0,41,342	0/0:16,0:17:5.89:0,6,169	1/1:6,31:37:90.23:1024,90,0	1/1:4,23:27:63.15:712,63,0	1/1:3,11:14:33.10:381,33,0	1/1:4,27:31:78.23:900,78,0	0/0:3,0:18:30.55:0,31,89	1/1:4,30:35:93.07:1024,93,0	1/1:1,24:25:69.16:782,69,0	1/1:3,24:27:66.20:762,66,0	1/1:4,22:27:57:638,57,0	1/1:2,18:20:54.16:623,54,0	1/1:5,20:25:52.40:591,52,0	1/1:3,12:15:30.09:346,30,0	0/0:2,0:18:30.55:0,31,89	0/0:1,0:21:36.66:0,37,108	1/1:0,19:18:54.16:623,54,0	1/1:3,34:37:99:1143,99,0	1/1:4,14:18:39.12:450,39,0	1/1:2,22:24:63.19:727,63,0	1/1:1,23:24:66.19:762,66,0	1/1:2,14:16:42.12:485,42,0	1/1:1,23:25:72:796,72,0	1/1:2,20:22:60.14:670,60,0	1/1:1,21:22:57.16:658,57,0	1/1:0,7:7:21.06:242,21,0
chr10	29195648	.	CAA	C	17329.24	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-3.494;DP=615;FS=39.684;HRun=9;HaplotypeScore=82.2698;InbreedingCoeff=0.9933;MQ=64.04;MQ0=1;MQRankSum=-1.972;QD=30.30;ReadPosRankSum=5.853;VQSLOD=2.6090;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,35:39:99:1164,102,0	1/1:1,6:7:18.05:210,18,0	0/0:24,0:19:34.97:0,35,488	0/0:18,0:14:36.10:0,36,484	1/1:2,26:28:72.20:837,72,0	1/1:2,22:23:54.16:629,54,0	1/1:1,17:18:45.13:524,45,0	1/1:3,20:23:48.11:550,48,0	1/1:0,21:21:57.17:664,57,0	1/1:7,24:31:72.20:839,72,0	1/1:5,21:26:60.17:699,60,0	1/1:1,9:10:27.08:315,27,0	1/1:4,14:18:39.11:455,39,0	1/1:1,21:22:63.19:734,63,0	1/1:1,16:17:45.13:524,45,0	1/1:0,12:12:36.11:420,36,0	1/1:3,51:54:99:1713,147,0	1/1:1,25:25:72.17:824,72,0	1/1:0,12:12:33.07:371,33,0	1/1:0,28:28:81.24:944,81,0	1/1:1,13:14:36.11:420,36,0	1/1:1,17:18:45.12:524,45,0	1/1:2,16:18:48.13:559,48,0	1/1:0,11:11:27.08:315,27,0	1/1:1,21:22:60.18:699,60,0	1/1:1,31:32:93.26:1074,93,0	1/1:2,31:33:90.26:1043,90,0	1/1:0,8:8:24.07:280,24,0
chr10	29200456	.	T	TATATATACACACACACACAC	9160.41	PASS	AB=0.777;AC=25;AF=0.543;AN=46;BaseQRankSum=-1.221;DP=263;FS=2.718;HRun=0;HaplotypeScore=131.7354;InbreedingCoeff=-0.1544;MQ=45.67;MQ0=11;MQRankSum=-0.251;QD=46.50;ReadPosRankSum=4.882;VQSLOD=4.1011;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:1,2:7:3.01:290,3,0	0/1:5,0:4:1.30:45,0,1	0/0:15,0:6:15.05:0,15,504	0/0:17,0:6:15.05:0,15,774	0/1:13,5:21:18.56:131,0,19	0/1:12,6:18:10.46:451,0,10	1/1:8,0:8:4.50:277,4,0	0/1:27,0:20:99:373,0,527	./.	0/1:6,4:11:19.81:1446,0,20	1/1:14,0:14:0.94:2,1,0	0/0:4,0:4:0:0,0,0	0/1:3,3:8:16.43:447,0,16	0/0:5,2:7:2.35:0,2,32	1/1:6,0:6:3.01:187,3,0	0/1:7,4:11:12.33:517,0,12	1/1:7,0:7:12.04:764,12,0	0/1:4,0:4:15.18:298,0,15	0/1:5,3:8:52.76:994,0,53	./.	1/1:2,0:2:3.01:48,3,0	./.	./.	0/0:4,0:4:5.71:0,6,32	1/1:8,3:12:6.02:324,6,0	0/1:9,6:16:70.03:2097,0,70	0/1:5,3:11:90.26:468,0,90	./.
chr10	29200688	.	TTATA	T	8701.20	PASS	AC=46;AF=0.920;AN=50;BaseQRankSum=-3.558;DP=241;FS=0.000;HRun=0;HaplotypeScore=50.2284;InbreedingCoeff=0.6192;MQ=56.93;MQ0=1;MQRankSum=-2.205;QD=38.67;ReadPosRankSum=1.688;VQSLOD=4.1772;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:2,0:4:9.03:0,9,174	1/1:1,3:4:9.03:155,9,0	./.	0/0:9,0:6:14.87:0,15,176	1/1:1,17:18:45.12:729,45,0	1/1:2,15:17:42.14:709,42,0	1/1:0,3:3:6.02:104,6,0	1/1:8,22:30:66.21:1077,66,0	1/1:2,5:7:12.04:205,12,0	1/1:4,6:10:18.06:311,18,0	1/1:1,11:11:27.09:466,27,0	1/1:1,1:2:3.01:52,3,0	1/1:0,9:9:27.09:466,27,0	1/1:2,5:7:12.04:206,12,0	1/1:1,5:6:6.02:104,6,0	1/1:2,3:5:6.02:104,6,0	1/1:3,10:13:24.08:414,24,0	1/1:0,8:8:24.08:415,24,0	1/1:1,11:12:33.11:546,33,0	1/1:2,7:9:20.77:281,21,0	./.	1/1:0,1:1:3.01:52,3,0	1/1:0,3:3:9.03:155,9,0	./.	1/1:1,11:12:30.10:518,30,0	1/1:3,16:19:45.14:750,45,0	1/1:1,14:15:42.14:725,42,0	1/1:0,3:3:9.03:155,9,0
chr10	29205830	.	ATG	A	1350.22	PASS	AB=0.883;AC=20;AF=0.357;AN=56;BaseQRankSum=8.290;DP=517;FS=3.327;HRun=0;HaplotypeScore=65.4480;InbreedingCoeff=-0.1178;MQ=64.47;MQ0=5;MQRankSum=0.558;QD=4.21;ReadPosRankSum=-0.215;VQSLOD=1.8115;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:23:33.11:0,33,502	0/1:7,2:9:13:13,0,235	0/1:19,1:13:24.77:25,0,76	0/0:25,0:11:6.02:0,6,89	0/0:20,1:21:5.07:0,5,519	0/0:24,2:26:20.06:0,20,653	0/1:14,3:17:45.23:45,0,213	0/1:27,2:29:48.86:49,0,308	1/1:2,11:15:38.61:382,39,0	0/1:18,2:20:40.99:41,0,372	0/1:15,4:20:49.17:49,0,313	0/1:13,3:16:35.02:35,0,354	0/1:16,2:18:19.95:20,0,565	0/0:14,0:14:36.12:0,36,553	0/0:16,0:16:27.09:0,27,415	0/1:11,2:14:18.12:18,0,318	0/1:24,1:25:21.26:21,0,462	1/1:9,11:23:41.61:416,42,0	0/1:15,1:16:16:16,0,201	0/1:22,2:24:19.95:20,0,576	0/1:15,4:19:9.97:10,0,298	0/1:13,2:15:44.04:44,0,249	0/0:13,0:13:18.06:0,18,264	0/0:20,2:21:6.30:0,6,491	0/0:6,0:11:15.02:0,15,168	1/1:12,8:21:29.91:320,30,0	0/0:16,0:16:33.58:0,34,507	0/0:8,0:7:12.04:0,12,184
chr10	29207532	.	GACAC	G	233.64	PASS	AB=0.839;AC=3;AF=0.058;AN=52;BaseQRankSum=-0.885;DP=511;FS=6.702;HRun=0;HaplotypeScore=105.5608;InbreedingCoeff=0.0221;MQ=63.89;MQ0=9;MQRankSum=-0.580;QD=5.31;ReadPosRankSum=1.887;VQSLOD=1.3653;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,1:32:1.80:0,2,296	0/0:4,0:4:3.01:0,3,63	./.	./.	0/0:14,0:14:6.02:0,6,113	0/0:15,0:15:12.04:0,12,213	0/0:21,0:21:3:0,3,25	0/0:24,0:22:2.94:0,3,18	0/1:10,0:11:8.29:128,0,8	0/0:13,0:13:21.01:0,21,349	0/0:12,0:12:18.06:0,18,328	0/0:16,0:15:12:0,12,174	0/0:19,0:19:15.52:0,16,246	0/0:11,0:11:3.01:0,3,53	0/0:18,0:18:24.08:0,24,451	0/0:17,0:17:15.01:0,15,177	0/1:16,2:19:5.75:164,0,6	0/1:9,4:14:9.37:38,0,9	0/0:19,0:19:12.03:0,12,183	0/0:11,0:11:6.02:0,6,107	0/0:30,0:29:20.99:0,21,280	0/0:14,0:13:6:0,6,65	0/0:11,0:12:12.04:0,12,211	0/0:35,0:34:29.74:0,30,351	0/0:15,0:15:6.01:0,6,67	0/0:18,0:18:27.01:0,27,400	0/0:25,0:25:36.89:0,37,524	0/0:9,0:9:12.01:0,12,162
chr10	29209233	.	TAC	T	988	PASS	AB=0.849;AC=7;AF=0.125;AN=56;BaseQRankSum=-2.757;DP=601;FS=0.686;HRun=0;HaplotypeScore=133.3309;InbreedingCoeff=0.4276;MQ=61.07;MQ0=3;MQRankSum=5.156;QD=8.82;ReadPosRankSum=4.121;VQSLOD=3.4874;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:13.65:0,14,587	0/0:8,0:14:18:0,18,157	0/0:30,0:19:3.01:0,3,39	0/1:28,1:20:4.20:28,0,4	0/0:27,0:34:12.89:0,13,87	0/0:17,0:24:23.56:0,24,238	0/0:17,0:18:8.97:0,9,73	0/0:23,0:23:21.48:0,21,233	1/1:7,6:12:18.05:203,18,0	0/0:13,0:18:30.98:0,31,270	0/0:22,0:30:26.17:0,26,199	0/0:13,0:18:6:0,6,52	0/0:14,0:21:20.90:0,21,194	0/1:6,0:13:1.93:2,0,31	0/0:15,0:17:3.47:0,3,27	0/0:10,0:13:6:0,6,54	1/1:15,17:32:41.95:457,42,0	0/1:7,15:25:11.79:431,0,12	0/0:15,0:15:14.97:0,15,144	0/0:15,0:19:14.42:0,14,114	0/0:13,0:20:5.81:0,6,57	0/0:8,0:22:31.52:0,32,239	0/0:14,0:21:10.71:0,11,76	0/0:14,0:25:6.01:0,6,70	0/0:13,0:21:14.74:0,15,117	0/0:19,0:19:28.96:0,29,288	0/0:13,0:18:14.40:0,14,118	0/0:7,0:7:9:0,9,83
chr10	29209248	.	A	ACACACACACA	7325.22	PASS	AB=1.000;AC=46;AF=0.821;AN=56;BaseQRankSum=-6.102;DP=591;FS=5.641;HRun=0;HaplotypeScore=176.1940;InbreedingCoeff=0.6130;MQ=50.77;MQ0=4;MQRankSum=-6.580;QD=15.32;ReadPosRankSum=-1.147;VQSLOD=3.4446;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:36:0,36,901	1/1:8,0:8:18.06:422,18,0	0/1:30,0:17:0.70:1,0,74	0/1:24,0:13:0.64:1,0,25	1/1:31,0:31:5.67:101,6,0	1/1:24,0:24:20.89:861,21,0	1/1:25,0:25:5.70:157,6,0	1/1:25,0:25:13.83:136,14,0	0/0:14,0:13:18.05:0,18,376	1/1:19,0:19:16.87:560,17,0	1/1:29,0:29:11.32:535,11,0	1/1:15,0:15:6.02:181,6,0	1/1:20,0:20:18.95:776,19,0	1/1:14,0:14:9.46:214,9,0	1/1:14,0:14:3.01:149,3,0	1/1:13,0:13:6.02:298,6,0	0/0:31,0:32:30.55:0,31,871	0/0:28,0:28:48.11:0,48,1021	1/1:12,4:17:17.71:420,18,0	1/1:15,0:15:8.95:388,9,0	1/1:23,0:23:3.01:102,3,0	1/1:24,0:23:24.08:603,24,0	1/1:21,0:21:5.28:297,5,0	1/1:24,0:24:3.01:149,3,0	1/1:23,0:22:12.04:362,12,0	1/1:16,0:16:8.39:141,8,0	1/1:18,0:18:9.45:389,9,0	1/1:6,0:6:6.02:82,6,0
chr10	29212829	.	CAA	C	6744.31	PASS	AB=0.934;AC=29;AF=0.518;AN=56;BaseQRankSum=-10.230;DP=727;FS=0.673;HRun=3;HaplotypeScore=104.4061;InbreedingCoeff=-0.1356;MQ=59.16;MQ0=20;MQRankSum=1.233;QD=12.09;ReadPosRankSum=-6.452;VQSLOD=-0.6359;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:40:76.81:0,77,974	0/1:13,0:13:10.39:75,0,10	0/0:50,0:21:38.01:0,38,332	0/1:60,0:19:35.49:35,0,223	0/1:14,1:15:62.41:195,0,62	0/1:32,1:33:3.28:477,0,3	0/1:11,2:13:20.24:212,0,20	1/1:28,0:28:63.30:487,63,0	0/0:18,0:17:26.15:0,26,580	0/1:33,0:32:1.06:352,0,1	0/1:20,0:20:27.97:138,0,28	0/1:25,3:28:22.49:450,0,22	0/1:18,1:19:48.22:216,0,48	0/1:4,18:22:45.72:117,0,46	0/1:20,1:21:48.08:271,0,48	0/1:26,1:27:8.20:434,0,8	0/0:35,0:35:47.25:0,47,1077	0/0:25,0:25:9.42:0,9,864	1/1:20,0:20:6.33:406,6,0	1/1:18,0:18:4.06:274,4,0	0/1:32,1:30:1.24:450,0,1	0/1:23,2:25:62.54:296,0,63	0/1:22,1:22:66.65:226,0,67	1/1:35,6:41:10.03:643,10,0	0/1:16,0:15:0.27:146,0,0	1/1:18,0:18:18.70:354,19,0	0/1:21,2:23:69.22:287,0,69	1/1:8,1:9:23.38:203,23,0
chr10	29214080	.	ATCTGGCTATAAG	A	4154.89	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.766;DP=725;FS=3.996;HRun=0;HaplotypeScore=236.4226;InbreedingCoeff=0.9960;MQ=86.67;MQ0=0;MQRankSum=-10.036;QD=78.39;ReadPosRankSum=0.827;VQSLOD=3.1108;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,129,7453	0/0:22,0:22:66.23:0,66,4032	0/0:23,0:23:69.23:0,69,3459	0/0:26,0:26:76.77:0,77,4358	0/0:26,0:26:78.27:0,78,4716	0/0:32,0:32:96.30:0,96,5582	0/0:31,0:31:93.32:0,93,5392	0/0:31,0:31:93.31:0,93,4912	1/1:0,27:27:63.22:2436,63,0	0/0:35,0:35:99:0,105,6236	0/0:19,0:19:57.20:0,57,3258	0/0:32,0:32:96.33:0,96,6106	0/0:40,0:40:99:0,120,7035	0/0:22,0:22:66.23:0,66,4117	0/0:36,0:36:99:0,105,6167	0/0:29,0:29:87.29:0,87,5156	1/1:0,10:10:18.06:712,18,0	1/1:0,16:16:27.09:1007,27,0	0/0:22,0:22:66.23:0,66,3807	0/0:20,0:20:60.21:0,60,3669	0/0:25,0:25:75.24:0,75,4440	0/0:29,0:29:84.24:0,84,4647	0/0:16,0:16:45.14:0,45,2488	0/0:32,0:32:96.33:0,96,5896	0/0:20,0:20:60.21:0,60,3683	0/0:30,0:30:90.30:0,90,5198	0/0:22,0:21:66.21:0,66,4008	0/0:9,0:9:24.08:0,24,1420
chr10	29217946	.	T	TGC	16974.34	PASS	AB=0.987;AC=47;AF=0.839;AN=56;BaseQRankSum=1.497;DP=738;FS=1.962;HRun=0;HaplotypeScore=113.0661;InbreedingCoeff=0.5879;MQ=63.61;MQ0=11;MQRankSum=2.812;QD=27.42;ReadPosRankSum=5.525;VQSLOD=6.1979;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:96.16:0,96,1128	1/1:2,7:9:13.71:212,14,0	0/0:45,0:23:42.37:0,42,438	0/0:39,0:23:50.85:0,51,542	1/1:6,17:23:36.12:615,36,0	1/1:4,22:26:48.15:802,48,0	1/1:1,21:24:48.16:828,48,0	1/1:4,15:19:44.72:473,45,0	0/1:23,0:23:81.80:284,0,82	1/1:4,11:15:32.93:406,33,0	1/1:5,21:26:28.36:660,28,0	1/1:9,26:35:41.19:858,41,0	1/1:3,18:22:36.07:619,36,0	1/1:3,27:31:38.16:787,38,0	1/1:2,14:16:30.10:517,30,0	1/1:4,17:21:9.51:507,10,0	0/1:24,1:25:99:290,0,142	0/1:18,0:19:59.97:117,0,60	1/1:6,15:21:44.66:518,45,0	1/1:1,27:28:63.22:1079,63,0	1/1:12,38:48:32.50:1159,32,0	1/1:5,27:32:60.04:1017,60,0	1/1:3,17:20:32.90:569,33,0	1/1:2,46:48:78.08:1341,78,0	1/1:2,20:22:51.17:880,51,0	1/1:2,32:35:95.99:1361,96,0	1/1:2,15:17:33.11:569,33,0	1/1:1,10:11:20.12:505,20,0
chr10	29217952	.	C	CGT	9696.37	PASS	AB=0.968;AC=38;AF=0.679;AN=56;BaseQRankSum=6.375;DP=721;FS=1.275;HRun=0;HaplotypeScore=140.5471;InbreedingCoeff=0.0123;MQ=64.52;MQ0=9;MQRankSum=-0.805;QD=15.97;ReadPosRankSum=10.616;VQSLOD=4.0263;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:84.20:0,84,1005	0/1:9,0:9:20.90:96,0,21	0/0:45,0:25:10.46:0,10,331	0/0:34,0:22:44.25:0,44,528	0/1:21,0:21:24.32:304,0,24	1/1:24,1:25:31.17:468,31,0	1/1:23,0:23:48.07:467,48,0	0/1:18,0:18:72.35:108,0,72	1/1:6,15:22:7.98:652,8,0	0/1:15,0:15:44.91:153,0,45	1/1:22,0:22:10.23:356,10,0	0/1:32,0:32:42.53:440,0,43	1/1:19,0:19:14.29:342,14,0	0/1:31,0:31:49.69:372,0,50	0/1:18,0:18:35.15:246,0,35	0/1:24,0:24:81.37:246,0,81	0/1:10,17:27:29.12:577,0,29	1/1:12,12:24:24.68:377,25,0	0/1:18,0:18:3.07:181,0,3	1/1:30,0:30:7.68:559,8,0	0/1:48,0:46:99:585,0,123	1/1:30,0:30:28.23:519,28,0	1/1:18,0:18:11.11:282,11,0	1/1:49,0:48:56.21:742,56,0	1/1:23,0:23:21.21:442,21,0	1/1:33,0:33:31.41:597,31,0	1/1:17,0:17:12.28:315,12,0	0/1:11,0:11:4.13:269,0,4
chr10	29218669	.	A	AT	17890.28	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-8.080;DP=680;FS=12.485;HRun=8;HaplotypeScore=56.9913;InbreedingCoeff=0.9733;MQ=70.16;MQ0=0;MQRankSum=-2.287;QD=28.04;ReadPosRankSum=-0.014;VQSLOD=4.4223;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:75.03:0,75,686	1/1:0,6:6:18.05:208,18,0	0/0:8,0:8:16.06:0,16,161	0/0:7,0:7:13.53:0,14,134	1/1:2,27:29:78.23:899,78,0	1/1:4,24:28:69.21:797,69,0	1/1:2,14:16:39.12:450,39,0	1/1:9,31:40:90.23:1010,90,0	1/1:3,26:29:69.21:796,69,0	1/1:5,40:46:99:1384,120,0	1/1:2,15:17:39.07:435,39,0	1/1:4,32:36:84.25:969,84,0	1/1:2,29:31:81.24:934,81,0	1/1:4,16:20:45.13:519,45,0	1/1:7,25:32:72.21:831,72,0	1/1:1,30:31:78.23:900,78,0	1/1:2,21:23:60.18:692,60,0	1/1:2,15:17:42.12:485,42,0	1/1:4,9:13:27.08:311,27,0	1/1:5,29:34:89.59:994,90,0	1/1:1,15:16:36.11:415,36,0	1/1:4,23:27:63.14:704,63,0	1/1:5,21:26:60.18:691,60,0	1/1:0,26:26:66.20:762,66,0	1/1:4,32:36:87.25:996,87,0	1/1:2,18:21:54.01:591,54,0	1/1:5,29:34:87.20:977,87,0	1/1:0,4:4:12.04:138,12,0
chr10	29221729	.	C	CT	27888.42	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-12.491;DP=730;FS=8.911;HRun=0;HaplotypeScore=61.5637;InbreedingCoeff=0.9985;MQ=85.91;MQ0=0;MQRankSum=-8.244;QD=43.71;ReadPosRankSum=3.880;VQSLOD=5.0468;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,132,1793	1/1:0,8:8:21.03:308,21,0	0/0:21,0:21:54.18:0,54,738	0/0:24,0:25:61.57:0,62,824	1/1:0,27:27:75.26:1198,75,0	1/1:0,28:28:66.23:1054,66,0	1/1:0,31:31:81.28:1295,81,0	1/1:1,35:36:99:1601,105,0	1/1:1,19:20:57.19:910,57,0	1/1:2,24:26:72.21:1101,72,0	1/1:0,18:18:51.17:815,51,0	1/1:0,26:26:72.25:1151,72,0	1/1:0,30:30:84.29:1342,84,0	1/1:0,20:20:60.20:959,60,0	1/1:0,20:20:54.18:863,54,0	1/1:0,24:24:63.21:1007,63,0	1/1:0,39:38:99:1774,111,0	1/1:0,27:27:75.26:1198,75,0	1/1:1,27:28:81.28:1276,81,0	1/1:0,35:35:96.27:1486,96,0	1/1:0,23:23:57.19:911,57,0	1/1:0,33:33:90.31:1439,90,0	1/1:0,23:23:69.24:1102,69,0	1/1:0,23:23:60.20:959,60,0	1/1:0,22:22:60.20:959,60,0	1/1:0,26:26:78.27:1247,78,0	1/1:1,28:29:78.22:1218,78,0	1/1:0,16:16:45.15:716,45,0
chr10	29224519	.	A	AG	24566.40	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=4.085;DP=693;FS=31.891;HRun=0;HaplotypeScore=113.4438;InbreedingCoeff=0.9915;MQ=86.76;MQ0=0;MQRankSum=-7.333;QD=40.88;ReadPosRankSum=2.193;VQSLOD=2.5166;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,138,1888	1/1:0,8:8:18.06:270,18,0	0/0:26,0:26:68.38:0,68,927	0/0:20,0:20:45.07:0,45,641	1/1:0,25:25:69.23:1023,69,0	1/1:0,25:25:75.25:1124,75,0	1/1:0,26:26:72.24:1078,72,0	1/1:0,30:30:90.26:1284,90,0	1/1:0,19:19:57.19:853,57,0	1/1:1,31:32:90.26:1267,90,0	1/1:1,17:18:45.15:674,45,0	1/1:1,18:19:53.93:805,54,0	1/1:0,45:45:99:1823,123,0	1/1:0,26:26:78.26:1169,78,0	1/1:0,34:34:90.30:1341,90,0	1/1:0,27:27:81.27:1205,81,0	1/1:0,25:25:72.24:1079,72,0	1/1:0,14:14:36.12:535,36,0	1/1:2,17:19:50.51:755,51,0	1/1:1,19:20:54.18:779,54,0	1/1:0,29:29:81.27:1217,81,0	1/1:0,16:16:45.15:674,45,0	1/1:0,21:21:60.20:901,60,0	1/1:0,21:21:51.17:763,51,0	1/1:0,28:28:72.24:1076,72,0	1/1:0,25:24:75.22:1060,75,0	1/1:1,43:44:99:1585,108,0	1/1:0,5:5:15.05:225,15,0
chr10	29224728	.	CG	C	22647.24	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=11.508;DP=684;FS=0.410;HRun=1;HaplotypeScore=162.0131;InbreedingCoeff=0.9956;MQ=77.54;MQ0=0;MQRankSum=-9.192;QD=38.45;ReadPosRankSum=4.208;VQSLOD=4.3152;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,120,1749	1/1:0,7:7:21.07:293,21,0	0/0:35,0:35:99:0,105,1535	0/0:18,1:19:52.99:0,53,778	1/1:0,23:23:60.05:754,60,0	1/1:0,22:22:66.22:922,66,0	1/1:0,25:25:72.24:1006,72,0	1/1:0,19:19:57.16:759,57,0	1/1:0,34:34:90.30:1256,90,0	1/1:0,28:28:83.44:1086,83,0	1/1:0,23:23:69.19:941,69,0	1/1:0,19:19:51.17:711,51,0	1/1:0,40:40:99:1590,114,0	1/1:0,32:32:87.29:1214,87,0	1/1:0,29:29:75.21:1026,75,0	1/1:0,23:23:57.19:796,57,0	1/1:0,39:39:99:1551,111,0	1/1:0,27:27:72.24:1006,72,0	1/1:0,21:21:62.50:797,63,0	1/1:0,22:22:63.21:880,63,0	1/1:0,16:16:42.14:586,42,0	1/1:0,23:23:69.23:962,69,0	1/1:0,16:16:45.15:627,45,0	1/1:0,23:23:57.19:796,57,0	1/1:0,14:14:36.12:503,36,0	1/1:0,35:35:99:1377,102,0	1/1:0,23:23:69.23:959,69,0	1/1:0,6:6:18.06:251,18,0
chr10	29225016	.	T	TA	12654.57	PASS	AB=0.732;AC=49;AF=0.875;AN=56;BaseQRankSum=-7.711;DP=609;FS=1.772;HRun=10;HaplotypeScore=58.5966;InbreedingCoeff=0.5561;MQ=68.15;MQ0=1;MQRankSum=-0.474;QD=22.80;ReadPosRankSum=-0.211;VQSLOD=5.5914;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,2:45:86.91:0,87,905	1/1:2,6:8:15.04:160,15,0	0/1:17,0:15:3.33:3,0,73	0/0:9,0:9:9.43:0,9,71	1/1:5,11:16:11.45:327,11,0	1/1:2,22:24:38.51:615,39,0	1/1:1,22:23:57.14:608,57,0	1/1:15,30:45:64.19:841,64,0	1/1:6,19:25:51.13:542,51,0	1/1:6,18:24:57.14:602,57,0	1/1:6,15:21:37.36:492,37,0	1/1:5,15:20:36.09:384,36,0	1/1:3,16:20:47.95:493,48,0	1/1:9,11:20:39.09:409,39,0	1/1:0,21:21:54.14:576,54,0	1/1:4,20:25:57.61:605,58,0	1/1:2,30:32:78.20:832,78,0	1/1:0,18:18:48.12:512,48,0	1/1:4,21:26:66:670,66,0	1/1:4,28:32:78.20:832,78,0	0/1:3,9:12:19.21:226,0,19	1/1:3,21:24:57:577,57,0	0/1:4,6:10:9.47:113,0,9	1/1:1,13:14:27.07:288,27,0	1/1:5,15:20:17.46:391,17,0	1/1:3,31:33:90.20:950,90,0	1/1:3,10:13:30.07:319,30,0	1/1:1,10:11:27.07:288,27,0
chr10	29226218	.	G	GT	24373.50	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-9.440;DP=756;FS=9.508;HRun=3;HaplotypeScore=76.8622;InbreedingCoeff=0.9971;MQ=84.38;MQ0=0;MQRankSum=-7.887;QD=36.87;ReadPosRankSum=3.419;VQSLOD=4.9976;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,138,1601	1/1:0,6:6:18.06:252,18,0	0/0:23,0:23:60.16:0,60,691	0/0:24,0:24:69.18:0,69,806	1/1:0,28:28:81.18:1087,81,0	1/1:0,21:20:60.16:818,60,0	1/1:0,30:30:78.26:1092,78,0	1/1:3,42:45:99:1606,126,0	1/1:1,16:17:42.14:588,42,0	1/1:3,26:29:78.22:1059,78,0	1/1:1,18:19:51.13:692,51,0	1/1:0,35:35:99:1428,102,0	1/1:2,28:30:81.27:1133,81,0	1/1:7,24:31:69.12:940,69,0	1/1:3,32:35:87.29:1218,87,0	1/1:0,26:26:72.24:1008,72,0	1/1:0,29:29:78.26:1092,78,0	1/1:0,26:26:72.24:1008,72,0	1/1:0,22:22:66.19:888,66,0	1/1:1,28:29:75.25:1049,75,0	1/1:2,29:31:75.21:1049,75,0	1/1:0,24:24:66.22:924,66,0	1/1:0,25:25:69.23:965,69,0	1/1:0,23:23:54.18:753,54,0	1/1:1,26:27:72.24:1008,72,0	1/1:2,32:34:90.25:1207,90,0	1/1:2,24:26:69.23:966,69,0	1/1:0,13:13:39.13:546,39,0
chr10	29228872	.	CT	C	17456.11	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=4.572;DP=653;FS=0.000;HRun=5;HaplotypeScore=64.9822;InbreedingCoeff=0.9985;MQ=94.91;MQ0=0;MQRankSum=-9.193;QD=30.79;ReadPosRankSum=4.506;VQSLOD=5.2398;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:78.11:0,78,990	1/1:0,13:13:36.10:408,36,0	0/0:29,0:29:72.22:0,72,947	0/0:30,0:30:81.23:0,81,1070	1/1:0,28:28:78.14:868,78,0	1/1:1,23:24:66.19:749,66,0	1/1:0,15:15:45.13:511,45,0	1/1:3,29:32:87.20:956,87,0	1/1:2,29:31:84.24:953,84,0	1/1:0,22:22:63.16:705,63,0	1/1:1,21:22:54.11:598,54,0	1/1:0,27:27:78.22:884,78,0	1/1:0,23:23:63.17:715,63,0	1/1:1,24:25:72.20:817,72,0	1/1:1,23:24:63.18:715,63,0	1/1:1,21:22:60.17:681,60,0	1/1:1,16:17:42.12:476,42,0	1/1:1,15:16:42.08:462,42,0	1/1:1,25:26:75.18:830,75,0	1/1:1,34:35:93.26:1055,93,0	1/1:0,26:26:72.21:817,72,0	1/1:0,20:20:57.16:646,57,0	1/1:0,19:19:57.16:646,57,0	1/1:1,26:27:63.07:684,63,0	1/1:2,21:23:60.17:681,60,0	1/1:1,18:19:54.15:613,54,0	1/1:2,22:24:66.19:749,66,0	1/1:0,7:7:21.06:238,21,0
chr10	29230561	.	GT	G	17429.77	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=4.953;DP=746;FS=5.397;HRun=7;HaplotypeScore=99.4825;InbreedingCoeff=0.9978;MQ=79.68;MQ0=0;MQRankSum=-6.046;QD=26.61;ReadPosRankSum=4.380;VQSLOD=5.0004;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,141,1720	1/1:0,16:16:45.10:457,45,0	0/0:22,0:22:51.05:0,51,582	0/0:21,0:21:53.52:0,54,636	1/1:1,36:37:96.21:977,96,0	1/1:3,27:30:72.16:734,72,0	1/1:1,24:25:66.15:672,66,0	1/1:5,26:31:78.18:796,78,0	1/1:0,24:24:66.15:673,66,0	1/1:1,26:27:78.15:784,78,0	1/1:1,30:31:78.16:795,78,0	1/1:1,25:26:72.16:735,72,0	1/1:1,23:24:69.16:704,69,0	1/1:0,30:30:72.16:735,72,0	1/1:2,32:34:93.21:949,93,0	1/1:2,25:26:66.15:673,66,0	1/1:1,22:23:60.14:612,60,0	1/1:1,9:10:24.05:245,24,0	1/1:0,23:23:66.12:664,66,0	1/1:3,22:25:63.07:629,63,0	1/1:1,22:23:65.18:649,65,0	1/1:2,23:25:60.13:609,60,0	1/1:0,23:23:60.14:612,60,0	1/1:1,30:31:84.19:857,84,0	1/1:2,29:31:69.16:704,69,0	1/1:1,33:34:99:1003,99,0	1/1:0,36:36:93.20:949,93,0	1/1:0,9:9:21.05:214,21,0
chr10	29232671	.	C	CCT	477.13	PASS	AB=0.988;AC=29;AF=0.518;AN=56;BaseQRankSum=6.119;DP=745;FS=0.000;HRun=0;HaplotypeScore=263.9928;InbreedingCoeff=0.1445;MQ=44.68;MQ0=3;MQRankSum=-3.410;QD=0.87;ReadPosRankSum=-2.610;VQSLOD=1.7495;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:56.92:0,57,695	1/1:13,0:13:4.65:11,5,0	0/0:50,0:28:60:0,60,769	0/0:41,0:24:22.05:0,22,529	1/1:26,1:27:5.94:45,6,0	1/1:34,0:32:12.36:46,12,0	0/0:24,0:22:2.01:0,2,31	0/1:44,0:43:27.26:27,0,44	0/0:28,0:28:16.19:0,16,397	1/1:30,0:30:6.28:57,6,0	1/1:18,0:18:5.99:51,6,0	0/1:22,1:22:11.24:78,0,11	0/1:21,1:21:24.12:45,0,24	0/1:41,0:40:10.33:42,0,10	0/1:42,0:42:14.42:41,0,14	0/1:31,0:31:16.70:70,0,17	0/0:14,0:14:24.03:0,24,269	0/0:10,0:8:15.02:0,15,195	0/1:24,0:24:3.41:3,0,21	0/1:30,0:28:0.53:1,0,14	0/1:10,0:10:0:0,0,0	1/1:30,1:30:2.93:26,3,0	0/1:26,1:27:0.02:2,0,0	1/1:15,0:14:4.52:11,5,0	1/1:35,0:35:4.15:10,4,0	0/1:20,0:20:4.96:29,0,5	0/1:26,0:27:40:42,0,40	0/1:5,0:5:0:0,0,0
chr10	29232699	.	TGTGTGC	T	9968.22	PASS	AB=0.579;AC=35;AF=0.648;AN=54;BaseQRankSum=8.781;DP=659;FS=5.007;HRun=0;HaplotypeScore=274.3123;InbreedingCoeff=0.7132;MQ=39.27;MQ0=11;MQRankSum=-10.831;QD=23.85;ReadPosRankSum=2.519;VQSLOD=4.1141;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:75.26:0,75,2400	1/1:1,14:15:12.03:274,12,0	0/0:60,0:25:45.53:0,46,1223	0/0:60,0:28:64.45:0,64,1508	0/1:5,17:22:0.26:0,0,1	1/1:7,11:18:15.05:341,15,0	1/1:4,12:15:5.43:136,5,0	1/1:17,22:38:90.31:1784,90,0	0/0:26,0:26:48.16:0,48,1569	1/1:5,19:24:69.23:1395,69,0	0/0:3,11:14:0:0,0,1	1/1:7,13:20:17.98:404,18,0	1/1:2,21:23:36.12:784,36,0	1/1:6,25:31:35.61:816,36,0	1/1:4,32:36:29.88:681,30,0	0/1:6,18:24:35.96:651,0,36	0/0:24,0:24:53.38:0,53,1692	0/0:10,0:9:24.08:0,24,700	1/1:6,7:13:18.06:381,18,0	1/1:7,20:27:7.67:204,8,0	0/0:7,13:19:0.47:0,0,1	1/1:6,10:16:8.80:205,9,0	1/1:4,21:25:1.12:67,1,0	0/1:4,8:11:0.17:0,0,0	1/1:2,18:20:14.36:342,14,0	1/1:3,11:14:36.12:798,36,0	1/1:5,18:23:41.95:703,42,0	./.
chr10	29232724	.	ATGTG	A	8325.83	PASS	AB=0.546;AC=42;AF=0.750;AN=56;BaseQRankSum=5.300;DP=750;FS=10.236;HRun=0;HaplotypeScore=278.5911;InbreedingCoeff=0.6850;MQ=44.61;MQ0=20;MQRankSum=-8.009;QD=15.92;ReadPosRankSum=-0.559;VQSLOD=3.0828;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,99,2439	1/1:6,8:14:15.05:254,15,0	0/0:57,0:15:18.06:0,18,400	0/0:63,0:22:23.38:0,23,342	1/1:8,11:19:6.15:102,6,0	1/1:4,16:18:15.05:254,15,0	1/1:4,19:23:20.91:355,21,0	1/1:17,21:37:63.20:1034,63,0	0/0:6,1:26:0.17:0,0,196	1/1:8,17:25:48.16:811,48,0	1/1:3,12:16:2.64:51,3,0	1/1:2,27:29:29.80:494,30,0	1/1:8,21:29:36.12:604,36,0	1/1:8,28:36:35.79:610,36,0	1/1:7,39:46:30.21:508,30,0	1/1:7,19:27:20.83:497,21,0	0/0:2,1:29:10.59:0,11,212	0/0:2,0:12:19.53:0,20,88	1/1:4,10:14:27.06:424,27,0	1/1:5,20:26:8.06:129,8,0	1/1:11,15:25:1.88:49,2,0	0/1:3,16:19:5.41:189,0,5	1/1:9,17:27:5.31:101,5,0	0/1:3,14:17:0.02:0,0,0	1/1:2,24:26:20.58:356,21,0	1/1:3,15:18:45.15:757,45,0	1/1:8,17:25:42.08:697,42,0	1/1:0,2:2:3.01:51,3,0
chr10	29234862	.	GA	G	6201.90	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=16.716;DP=718;FS=1.834;HRun=1;HaplotypeScore=129.6424;InbreedingCoeff=0.9846;MQ=85.55;MQ0=0;MQRankSum=-5.511;QD=11.30;ReadPosRankSum=3.129;VQSLOD=3.4581;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,102,1546	1/1:14,0:14:39.83:199,40,0	0/0:21,0:21:60.13:0,60,904	0/0:27,0:27:77.98:0,78,1155	1/1:22,1:23:51.98:301,52,0	1/1:28,0:28:65.98:349,66,0	1/1:23,0:23:56.59:279,57,0	1/1:37,0:37:58.23:332,58,0	0/0:27,0:27:81.15:0,81,1235	1/1:31,0:31:26.98:225,27,0	1/1:18,0:18:40.14:215,40,0	1/1:25,0:25:68.69:383,69,0	1/1:23,0:23:23.43:206,23,0	1/1:28,1:29:44.10:360,44,0	1/1:28,0:28:68.26:348,68,0	1/1:27,0:27:68.21:352,68,0	0/0:37,0:37:99:0,108,1723	0/0:20,0:20:60.17:0,60,928	1/1:31,0:31:35.56:275,36,0	1/1:24,1:25:29.02:199,29,0	1/1:26,0:26:68.15:339,68,0	1/1:17,0:17:18.50:149,18,0	1/1:24,0:24:35.56:255,36,0	1/1:29,0:29:74.56:395,75,0	1/1:27,0:27:30.67:238,31,0	1/1:27,1:28:63.65:289,64,0	1/1:33,0:33:88.09:472,88,0	1/1:3,0:3:8.52:42,9,0
chr10	29234863	.	AG	A	17399.12	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=12.796;DP=673;FS=1.054;HRun=2;HaplotypeScore=86.1824;InbreedingCoeff=0.9882;MQ=87.72;MQ0=0;MQRankSum=-5.103;QD=34.59;ReadPosRankSum=1.920;VQSLOD=5.1499;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,102,1427	1/1:0,14:14:42.14:545,42,0	0/0:23,0:23:62.70:0,63,854	0/0:27,0:27:75.18:0,75,1079	1/1:2,20:22:54.01:675,54,0	1/1:0,25:25:69.22:895,69,0	1/1:0,23:23:60.20:779,60,0	1/1:0,37:37:99:1307,102,0	0/0:28,0:28:81.26:0,81,1184	1/1:1,27:28:77.90:956,78,0	1/1:1,13:14:39.08:506,39,0	1/1:2,22:24:72.23:928,72,0	1/1:1,20:21:48.15:617,48,0	1/1:1,25:26:69.22:891,69,0	1/1:0,25:25:72.23:935,72,0	1/1:0,24:24:72.23:935,72,0	0/0:36,0:36:99:0,108,1618	0/0:20,0:20:60.18:0,60,869	1/1:0,28:28:81.03:999,81,0	1/1:2,19:21:48.09:602,48,0	1/1:1,24:25:72.23:935,72,0	1/1:2,12:14:30:370,30,0	1/1:0,21:21:47.47:618,47,0	1/1:0,28:28:78.25:1012,78,0	1/1:1,22:23:54.14:701,54,0	1/1:1,23:24:69.21:878,69,0	1/1:1,32:33:93.30:1197,93,0	1/1:0,3:3:9.03:117,9,0
chr10	29234865	.	GA	G	5629.43	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=16.201;DP=674;FS=1.843;HRun=2;HaplotypeScore=127.8705;InbreedingCoeff=0.9205;MQ=87.20;MQ0=0;MQRankSum=-5.841;QD=11.15;ReadPosRankSum=3.668;VQSLOD=3.4493;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:96.28:0,96,1371	1/1:14,0:14:39.23:184,39,0	0/0:22,0:22:58.59:0,59,845	0/0:27,0:27:79.47:0,79,1124	1/1:22,0:22:7.09:194,7,0	1/1:26,0:26:43.31:313,43,0	1/1:25,0:25:7.25:192,7,0	1/1:38,0:38:62.14:332,62,0	0/0:28,0:28:81.27:0,81,1210	1/1:27,0:27:60.85:297,61,0	1/1:13,0:13:35.60:157,36,0	1/1:22,2:24:67.24:354,67,0	1/1:21,1:22:21.34:215,21,0	1/1:26,0:26:64.62:327,65,0	1/1:25,0:25:67.04:315,67,0	1/1:24,0:24:66.82:313,67,0	0/0:37,0:37:99:0,111,1643	0/0:19,0:19:57.17:0,57,829	1/1:29,0:29:40.95:274,41,0	1/1:20,0:20:41.71:196,42,0	1/1:24,0:24:67.30:327,67,0	1/1:13,0:13:3.12:94,3,0	1/1:21,0:21:44.61:237,45,0	1/1:28,0:28:73.25:362,73,0	1/1:22,0:22:49.04:217,49,0	1/1:25,0:25:33.65:230,34,0	1/1:33,1:34:71.05:460,71,0	1/1:3,0:3:8.38:39,8,0
chr10	29235538	.	GA	G	13103.58	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=8.645;DP=686;FS=25.628;HRun=7;HaplotypeScore=82.1534;InbreedingCoeff=0.9997;MQ=85.48;MQ0=0;MQRankSum=-3.760;QD=25.49;ReadPosRankSum=2.070;VQSLOD=3.2901;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:91.98:0,92,1357	1/1:1,11:12:33.07:336,33,0	0/0:33,0:31:70.95:0,71,829	0/0:41,0:36:65.38:0,65,746	1/1:3,20:23:54.12:551,54,0	1/1:2,21:23:63.14:643,63,0	1/1:5,21:26:54.59:552,55,0	1/1:6,27:33:81.18:826,81,0	0/0:21,0:21:60.19:0,60,750	1/1:1,28:29:81.13:808,81,0	1/1:1,16:17:45.10:459,45,0	1/1:3,21:24:54.12:551,54,0	1/1:1,24:25:59.88:611,60,0	1/1:3,18:21:48.11:490,48,0	1/1:1,24:25:66.15:674,66,0	1/1:2,20:22:57.13:582,57,0	0/0:20,0:20:54.12:0,54,663	0/0:17,0:17:39.12:0,39,489	1/1:8,15:23:45.10:459,45,0	1/1:1,26:27:63.13:643,63,0	1/1:5,23:28:72.15:734,72,0	1/1:1,20:21:57.13:580,57,0	1/1:3,21:24:57.10:581,57,0	1/1:2,32:34:86.57:913,87,0	1/1:1,21:22:57.13:582,57,0	1/1:2,21:23:63.14:643,63,0	1/1:1,21:22:60.13:612,60,0	1/1:0,10:10:27.06:275,27,0
chr10	29236371	.	T	TGTCTC	3462.36	PASS	AB=0.998;AC=25;AF=0.481;AN=52;BaseQRankSum=-1.826;DP=670;FS=0.495;HRun=0;HaplotypeScore=202.5239;InbreedingCoeff=0.0512;MQ=50.54;MQ0=60;MQRankSum=0.817;QD=7.38;ReadPosRankSum=2.851;VQSLOD=2.7355;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:25:46.25:0,46,959	0/1:8,0:7:13.08:69,0,13	0/0:29,0:18:36.12:0,36,668	0/0:34,0:18:26.72:0,27,364	0/1:22,0:21:29.01:69,0,29	./.	0/0:20,0:15:6:0,6,55	0/1:48,0:43:99:368,0,332	0/0:16,0:15:5.81:0,6,60	0/1:24,0:23:64.77:472,0,65	0/0:19,0:16:2.53:0,3,36	1/1:16,12:26:14.80:135,15,0	0/1:30,0:26:34.23:364,0,34	0/1:19,0:16:18.34:65,0,18	0/1:42,1:38:47.09:270,0,47	0/1:31,0:28:35.13:35,0,82	0/0:17,0:16:14.68:0,15,403	0/0:9,0:5:12.01:0,12,162	1/1:18,0:16:35.72:378,36,0	1/1:23,0:20:14.91:161,15,0	1/1:24,0:16:9.03:115,9,0	1/1:26,0:23:8.86:75,9,0	1/1:31,0:26:5.93:59,6,0	./.	0/1:32,0:28:7.12:78,0,7	0/1:34,0:30:99:563,0,149	0/1:21,0:18:32.57:101,0,33	1/1:7,0:2:6.02:84,6,0
chr10	29236372	.	G	GTCTCTGTT	484.78	PASS	AB=0.913;AC=12;AF=0.214;AN=56;BaseQRankSum=4.080;DP=680;FS=12.986;HRun=0;HaplotypeScore=240.4933;InbreedingCoeff=-0.0555;MQ=49.63;MQ0=61;MQRankSum=-3.668;QD=2.08;ReadPosRankSum=2.936;VQSLOD=0.8053;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:25:39.03:0,39,1168	0/1:8,0:7:1.64:30,0,2	0/0:29,0:18:33.11:0,33,710	0/0:32,0:16:21.08:0,21,367	0/0:23,0:22:7.41:0,7,53	0/1:20,0:16:0:0,0,0	0/0:7,0:14:5.40:0,5,25	0/0:48,0:44:95.16:0,95,864	0/1:6,11:16:13.99:14,0,19	0/1:25,0:24:53.52:54,0,251	0/0:15,0:18:2.78:0,3,24	0/0:27,0:25:13.30:0,13,111	0/1:31,0:27:52.95:53,0,105	0/0:19,0:16:6.78:0,7,78	0/1:44,0:39:49.60:50,0,133	0/0:32,0:29:12.36:0,12,100	0/1:16,0:15:11.16:246,0,11	0/1:9,0:5:9.57:55,0,10	0/1:5,0:18:8.09:8,0,195	0/0:24,0:21:14.55:0,15,132	0/0:24,0:16:7.80:0,8,52	0/0:26,0:23:8.99:0,9,75	0/0:32,0:28:5.99:0,6,48	1/1:10,0:7:0.47:1,0,0	0/0:31,0:28:15.18:0,15,150	0/1:32,0:28:99:107,0,398	0/0:21,0:18:12.58:0,13,184	0/0:7,0:2:5.99:0,6,49
chr10	29236374	.	C	CTCG	2240.30	PASS	AB=0.980;AC=25;AF=0.446;AN=56;BaseQRankSum=-2.259;DP=659;FS=1.651;HRun=0;HaplotypeScore=195.4515;InbreedingCoeff=-0.0050;MQ=46.84;MQ0=65;MQRankSum=1.802;QD=4.67;ReadPosRankSum=1.479;VQSLOD=2.8595;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:25:47.76:0,48,811	0/1:8,0:7:25.44:50,0,25	0/0:24,0:15:36.12:0,36,581	0/0:30,0:14:25.13:0,25,311	0/1:24,0:23:50.85:67,0,51	0/0:19,1:15:3.47:0,3,26	0/0:14,0:9:6.02:0,6,70	0/1:49,0:44:99:235,0,616	0/0:17,0:16:6.02:0,6,83	0/1:25,0:24:99:369,0,185	0/0:19,0:16:5.76:0,6,80	1/1:28,0:25:14.80:135,15,0	0/1:30,1:27:59.83:256,0,60	0/1:22,0:18:37.88:61,0,38	0/1:44,0:39:52.53:200,0,53	0/1:32,0:28:35.05:35,0,115	0/0:16,0:15:35.38:0,35,455	0/0:10,0:5:12.01:0,12,161	0/1:9,0:7:24:24,0,89	1/1:24,0:21:14.44:140,14,0	1/1:22,1:15:8.84:75,9,0	1/1:28,0:24:8.16:74,8,0	1/1:34,0:28:5.87:35,6,0	0/1:10,0:7:0:0,0,0	0/1:31,0:27:9.95:79,0,10	0/1:29,1:26:99:470,0,240	0/1:16,5:18:53.64:75,0,54	1/1:7,0:2:5.85:34,6,0
chr10	29236376	.	CT	C	3473.08	PASS	AB=0.672;AC=21;AF=0.375;AN=56;BaseQRankSum=-4.342;DP=638;FS=5.486;HRun=1;HaplotypeScore=177.6800;InbreedingCoeff=-0.1212;MQ=45.23;MQ0=66;MQRankSum=0.251;QD=7.65;ReadPosRankSum=0.562;VQSLOD=0.8512;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:26:51.14:0,51,777	0/1:4,5:8:31.55:32,0,40	0/0:21,0:12:36.12:0,36,556	0/0:26,0:13:24.72:0,25,308	0/1:13,10:23:63.54:65,0,64	0/0:12,7:14:3.48:0,3,40	0/0:10,1:6:6:0,6,59	0/1:24,22:42:99:633,0,593	0/0:16,0:15:5.85:0,6,60	0/1:12,12:24:99:417,0,199	0/0:12,6:15:5.86:0,6,77	1/1:20,8:25:0.11:191,0,0	0/1:15,16:27:52.20:288,0,52	0/1:12,9:17:71.54:107,0,72	0/1:18,24:39:47.58:256,0,48	0/1:14,17:28:57.09:57,0,103	0/0:16,0:15:35.40:0,35,454	0/0:10,0:5:12.01:0,12,150	0/0:7,0:5:8.87:0,9,96	1/1:10,14:21:0.13:190,0,0	0/1:11,11:14:1.57:75,0,2	0/1:11,15:23:5.93:113,0,6	1/1:16,15:27:6.02:84,6,0	0/0:3,6:7:0:0,0,0	0/1:14,17:27:8.28:152,0,8	0/1:16,14:26:99:548,0,168	0/1:12,7:16:99:182,0,124	1/1:4,2:2:6.02:84,6,0
chr10	29237155	.	GATAAAACACC	G	3193.13	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=4.609;DP=781;FS=1.362;HRun=0;HaplotypeScore=253.1385;InbreedingCoeff=0.9363;MQ=79.29;MQ0=0;MQRankSum=-9.853;QD=54.12;ReadPosRankSum=2.292;VQSLOD=3.1434;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,123,6158	0/0:18,0:18:48.16:0,48,2412	0/0:22,0:22:45.15:0,45,1904	0/0:21,0:21:44.51:0,45,1442	0/0:26,0:26:75.26:0,75,3588	0/0:28,0:28:78.27:0,78,3682	0/0:28,0:28:84.29:0,84,4005	0/0:38,0:38:96.31:0,96,4367	1/1:8,26:34:66.23:2095,66,0	0/0:36,0:36:99:0,102,5011	0/0:27,0:27:72.25:0,72,3412	0/0:29,0:29:81.26:0,81,3917	0/0:31,0:31:87.30:0,87,4226	0/0:37,0:37:87.27:0,87,4262	0/0:40,0:40:99:0,99,5074	0/0:41,0:41:99:0,105,5198	1/1:7,9:16:21.07:667,21,0	1/1:2,7:9:18.06:572,18,0	0/0:24,0:24:69.23:0,69,3252	0/0:26,0:26:75.26:0,75,3743	0/0:26,0:26:78.24:0,78,3702	0/0:30,0:30:81.26:0,81,3876	0/0:23,0:23:63.22:0,63,3114	0/0:23,0:23:66.23:0,66,3342	0/0:36,0:36:99:0,99,4487	0/0:30,0:30:90.31:0,90,4375	0/0:38,0:38:93.28:0,93,3903	0/0:2,0:2:3.01:0,3,155
chr10	29237216	.	C	CT	28634.41	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-17.158;DP=868;FS=9.603;HRun=1;HaplotypeScore=92.0296;InbreedingCoeff=0.9929;MQ=67.73;MQ0=1;MQRankSum=2.245;QD=41.26;ReadPosRankSum=4.089;VQSLOD=4.6737;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,108,1402	1/1:2,14:16:45.14:653,45,0	0/0:46,0:43:99:0,123,1525	0/0:30,0:28:75.24:0,75,956	1/1:0,31:31:93.32:1393,93,0	1/1:0,26:26:69.23:1034,69,0	1/1:1,27:28:78.26:1169,78,0	1/1:3,39:42:99:1714,117,0	0/0:30,0:30:78.24:0,78,997	1/1:1,38:39:99:1731,117,0	1/1:2,19:21:60.16:868,60,0	1/1:1,41:42:99:1709,114,0	1/1:1,35:36:99:1483,99,0	1/1:2,37:39:99:1484,99,0	1/1:1,39:40:99:1574,105,0	1/1:2,46:48:99:1844,123,0	0/0:25,0:25:75.24:0,75,973	0/0:6,0:6:12.04:0,12,156	1/1:1,17:18:54.16:787,54,0	1/1:1,35:36:99:1435,99,0	1/1:0,35:35:99:1483,99,0	1/1:0,31:31:87.25:1279,87,0	1/1:0,31:31:84:1259,84,0	1/1:0,28:28:81.27:1214,81,0	1/1:0,34:34:96.33:1439,96,0	1/1:0,31:31:93.30:1372,93,0	1/1:1,33:34:93.32:1394,93,0	1/1:0,8:8:21.07:315,21,0
chr10	29239203	.	AAAAG	A	3211.76	PASS	AC=32;AF=0.640;AN=50;BaseQRankSum=-1.544;DP=516;FS=16.246;HRun=0;HaplotypeScore=95.6944;InbreedingCoeff=0.8541;MQ=66.11;MQ0=5;MQRankSum=1.750;QD=10.89;ReadPosRankSum=-1.065;VQSLOD=1.5337;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:27.05:0,27,516	1/1:6,6:12:11.80:124,12,0	./.	./.	1/1:8,10:18:23.97:294,24,0	1/1:5,15:20:21.07:322,21,0	1/1:14,0:14:15.02:169,15,0	./.	0/0:17,0:17:24.94:0,25,280	1/1:9,9:18:27.06:352,27,0	1/1:14,17:31:47.71:474,48,0	1/1:7,7:14:9.03:138,9,0	1/1:9,7:16:8.79:138,9,0	1/1:8,11:19:6.02:92,6,0	1/1:16,0:16:9.03:138,9,0	0/0:17,0:16:33.08:0,33,599	0/0:10,0:9:6:0,6,52	0/0:13,0:12:10.19:0,10,83	1/1:17,7:24:21.04:276,21,0	1/1:11,11:22:32.64:400,33,0	1/1:2,9:11:6.02:92,6,0	1/1:8,0:9:11.93:134,12,0	1/1:15,16:31:8.04:125,8,0	0/0:20,0:19:26.90:0,27,418	1/1:14,6:20:9.03:138,9,0	0/0:15,0:32:17.32:0,17,775	0/0:17,0:25:6.02:0,6,105	0/0:10,0:10:15.05:0,15,260
chr10	29239275	.	GCC	G	152.25	PASS	AB=0.830;AC=3;AF=0.054;AN=56;BaseQRankSum=7.748;DP=532;FS=4.117;HRun=2;HaplotypeScore=86.9421;InbreedingCoeff=0.0126;MQ=66.12;MQ0=1;MQRankSum=-5.068;QD=4.23;ReadPosRankSum=3.056;VQSLOD=-0.4893;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:39.13:0,39,771	0/0:7,0:7:21.07:0,21,410	0/0:14,0:12:33.11:0,33,634	0/0:14,0:13:39.13:0,39,730	0/0:28,0:28:81.28:0,81,1540	0/0:25,0:25:69.24:0,69,1401	0/0:34,0:34:99:0,99,1978	0/0:33,0:33:99:0,99,1826	0/1:10,8:18:35.52:114,0,36	0/0:21,0:21:63.22:0,63,1190	0/0:25,0:25:60.21:0,60,1140	0/0:11,0:11:30.10:0,30,604	0/0:14,0:14:36.12:0,36,714	0/0:20,0:20:48.16:0,48,902	0/0:15,0:15:45.15:0,45,829	0/0:16,0:15:48.16:0,48,924	0/1:7,1:8:9.31:56,0,9	0/1:9,1:10:53.61:82,0,54	0/0:24,0:24:72.24:0,72,1378	0/0:21,0:21:57.19:0,57,1073	0/0:28,0:28:69.24:0,69,1367	0/0:15,0:15:42.13:0,42,800	0/0:23,0:23:51.17:0,51,866	0/0:15,0:15:42.14:0,42,836	0/0:12,0:12:33.11:0,33,654	0/0:26,0:26:78.27:0,78,1465	0/0:24,0:24:60.41:0,60,1241	0/0:17,0:17:42.14:0,42,835
chr10	29239278	.	AGC	A	152.04	PASS	AB=0.833;AC=3;AF=0.054;AN=56;BaseQRankSum=7.735;DP=531;FS=4.102;HRun=0;HaplotypeScore=84.7307;InbreedingCoeff=0.0200;MQ=67.74;MQ0=0;MQRankSum=-4.830;QD=4.11;ReadPosRankSum=3.198;VQSLOD=1.8163;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:42.14:0,42,795	0/0:7,0:7:21.07:0,21,410	0/0:14,0:13:39.01:0,39,672	0/0:15,0:14:39.13:0,39,741	0/0:29,0:29:84.27:0,84,1566	0/0:26,0:26:72.25:0,72,1422	0/0:35,0:35:99:0,102,1999	0/0:29,0:29:87.30:0,87,1679	0/1:10,8:18:34.61:114,0,35	0/0:21,0:21:63.22:0,63,1202	0/0:23,0:23:60.21:0,60,1140	0/0:11,0:11:30.10:0,30,608	0/0:14,0:14:36.12:0,36,714	0/0:19,0:19:48.16:0,48,923	0/0:15,0:15:45.15:0,45,829	0/0:15,0:14:45.14:0,45,865	0/1:7,1:8:8.80:56,0,9	0/1:10,1:11:47.16:82,0,47	0/0:27,0:27:78.27:0,78,1482	0/0:22,0:22:60.20:0,60,1116	0/0:28,0:28:69.24:0,69,1366	0/0:16,0:16:45.15:0,45,862	0/0:22,0:22:51.17:0,51,866	0/0:16,0:16:45.15:0,45,872	0/0:12,0:12:33.11:0,33,654	0/0:25,0:25:72.25:0,72,1351	0/0:24,0:24:60.40:0,60,1221	0/0:14,0:14:42.14:0,42,836
chr10	29241220	.	T	TA	1253.93	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.245;DP=607;FS=8.903;HRun=6;HaplotypeScore=63.3923;InbreedingCoeff=0.9187;MQ=70.94;MQ0=0;MQRankSum=-1.690;QD=23.22;ReadPosRankSum=1.827;VQSLOD=2.9008;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:27:81.11:0,81,801	0/0:13,0:13:30.06:0,30,306	0/0:13,0:13:32.44:0,32,277	0/0:6,0:6:1.21:0,1,29	0/0:45,0:45:99:0,129,1309	0/0:19,0:19:51.09:0,51,513	0/0:17,0:17:42.09:0,42,429	0/0:38,0:38:96.20:0,96,975	1/1:5,16:21:42.13:528,42,0	0/0:34,0:34:93.19:0,93,938	0/0:23,0:23:54.09:0,54,543	0/0:21,0:21:63.14:0,63,642	0/0:30,0:30:81.18:0,81,826	0/0:19,0:19:45.08:0,45,454	0/0:20,0:20:51.11:0,51,520	0/0:22,0:22:63.13:0,63,636	1/1:2,15:17:39.12:491,39,0	1/1:4,12:16:29.85:377,30,0	0/0:15,0:15:36.08:0,36,367	0/0:32,0:32:87.18:0,87,879	0/0:8,0:8:15.03:0,15,153	0/0:19,0:19:54.12:0,54,551	0/0:21,0:21:63.14:0,63,638	0/0:14,0:14:33.06:0,33,331	0/0:33,0:33:96.21:0,96,979	0/0:31,0:31:84.17:0,84,857	0/0:18,0:18:51.12:0,51,520	0/0:14,0:14:39.56:0,40,398
chr10	29242678	.	GTTAGGAA	G	33964.75	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=5.821;DP=620;FS=1.170;HRun=0;HaplotypeScore=191.0917;InbreedingCoeff=0.9786;MQ=81.26;MQ0=1;MQRankSum=-11.616;QD=59.90;ReadPosRankSum=7.028;VQSLOD=4.8223;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,24:27:63.22:1538,63,0	1/1:1,7:8:24.08:615,24,0	0/0:26,0:27:78.20:0,78,2555	0/0:26,0:26:72.21:0,72,2204	1/1:0,21:21:51.17:1190,51,0	1/1:2,14:16:39.13:980,39,0	1/1:4,20:24:51.18:1267,51,0	1/1:5,19:24:57.19:1331,57,0	1/1:2,18:20:45.15:1134,45,0	1/1:2,30:32:90.28:2209,90,0	1/1:1,23:24:63.22:1539,63,0	1/1:5,35:41:99:2749,108,0	1/1:2,22:24:51.17:1276,51,0	1/1:0,21:21:57.20:1408,57,0	1/1:0,16:16:39.13:1000,39,0	1/1:1,27:28:72.25:1845,72,0	1/1:3,10:13:27.09:676,27,0	1/1:2,4:6:12.04:308,12,0	1/1:5,18:23:54.14:1292,54,0	1/1:3,26:29:72.25:1823,72,0	1/1:2,12:14:24.08:568,24,0	1/1:3,21:24:54.19:1360,54,0	1/1:1,27:28:75.26:1807,75,0	1/1:4,13:17:23.75:614,24,0	1/1:1,19:20:57.20:1416,57,0	1/1:4,23:26:66.23:1645,66,0	1/1:3,30:33:72.25:1836,72,0	1/1:0,7:7:21.07:538,21,0
chr10	29242791	.	AT	A	15605.44	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=6.807;DP=607;FS=3.858;HRun=5;HaplotypeScore=225.8254;InbreedingCoeff=0.9632;MQ=70.68;MQ0=0;MQRankSum=-8.378;QD=27.19;ReadPosRankSum=5.745;VQSLOD=1.7902;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,35:39:87.09:986,87,0	1/1:3,5:8:15.04:170,15,0	0/0:18,0:18:42.09:0,42,577	0/0:15,0:15:19.16:0,19,368	1/1:2,27:29:69.16:774,69,0	1/1:1,17:18:39.11:440,39,0	1/1:1,26:27:72.20:813,72,0	1/1:3,17:20:54.02:591,54,0	1/1:3,12:15:39.08:421,39,0	1/1:1,27:28:75.21:847,75,0	1/1:2,13:15:36.10:400,36,0	1/1:4,24:28:60.17:679,60,0	1/1:1,22:23:64.07:715,64,0	1/1:0,22:22:60.17:677,60,0	1/1:2,29:31:78.22:883,78,0	1/1:0,29:29:72.20:816,72,0	1/1:1,7:8:21.06:238,21,0	1/1:2,5:7:15.04:168,15,0	1/1:1,17:18:45.13:509,45,0	1/1:1,27:28:69.19:777,69,0	1/1:3,25:28:59.81:680,60,0	1/1:2,25:27:72.09:793,72,0	1/1:2,17:19:39.11:442,39,0	1/1:1,20:21:48:523,48,0	1/1:5,18:23:51.14:576,51,0	1/1:2,23:25:69.18:773,69,0	1/1:8,26:34:69.19:781,69,0	1/1:0,4:4:12.03:136,12,0
chr10	29242837	.	A	AG	1202.46	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-2.148;DP=662;FS=0.676;HRun=3;HaplotypeScore=232.2689;InbreedingCoeff=0.9912;MQ=81.85;MQ0=0;MQRankSum=-0.845;QD=30.83;ReadPosRankSum=1.565;VQSLOD=2.4591;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:90.26:0,90,1068	0/0:10,0:10:30.09:0,30,360	0/0:27,0:27:72.19:0,72,831	0/0:23,0:23:62.08:0,62,737	0/0:26,0:26:66.20:0,66,792	0/0:18,0:18:45.12:0,45,527	0/0:40,0:40:99:0,102,1223	0/0:41,0:41:99:0,117,1368	1/1:1,15:16:42.14:588,42,0	0/0:24,0:24:66.15:0,66,766	0/0:16,0:16:42.13:0,42,504	0/0:28,0:28:81.25:0,81,971	0/0:19,0:19:51.15:0,51,611	0/0:24,0:24:63.19:0,63,755	0/0:38,0:38:99:0,108,1283	0/0:28,0:28:75.22:0,75,888	1/1:2,14:16:39.13:545,39,0	1/1:1,6:7:15.05:210,15,0	0/0:25,0:25:66.18:0,66,778	0/0:24,0:24:63.19:0,63,756	0/0:33,0:33:84.25:0,84,996	0/0:26,0:26:75.21:0,75,886	0/0:20,0:20:54.16:0,54,648	0/0:22,0:22:54.12:0,54,629	0/0:15,0:15:36.11:0,36,431	0/0:26,0:26:75.23:0,75,896	0/0:28,0:28:63.14:0,63,718	0/0:7,0:7:18.06:0,18,216
chr10	29243212	.	TG	T	3560.54	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=10.350;DP=813;FS=0.000;HRun=1;HaplotypeScore=81.8834;InbreedingCoeff=0.9996;MQ=76.47;MQ0=0;MQRankSum=-2.214;QD=37.48;ReadPosRankSum=2.021;VQSLOD=4.1757;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,111,1748	0/0:17,0:17:51.16:0,51,791	0/0:19,0:19:57.14:0,57,748	0/0:28,0:28:63.42:0,63,831	0/0:34,0:34:96.26:0,96,1435	0/0:27,0:27:81.28:0,81,1291	0/0:29,0:29:84.29:0,84,1342	0/0:37,0:37:99:0,111,1652	1/1:1,36:37:48.38:1252,48,0	0/0:33,0:33:99:0,99,1531	0/0:19,0:19:54.13:0,54,832	0/0:35,0:35:99:0,105,1583	0/0:34,0:34:99:0,99,1558	0/0:38,0:38:99:0,108,1723	0/0:44,0:44:99:0,132,2107	0/0:39,0:39:99:0,117,1796	1/1:0,30:30:90.30:1258,90,0	1/1:1,27:28:42.45:1051,42,0	0/0:36,0:36:99:0,108,1723	0/0:13,0:13:36.10:0,36,549	0/0:23,0:23:69.24:0,69,1103	0/0:38,0:38:99:0,114,1820	0/0:27,0:27:81.26:0,81,1258	0/0:20,0:20:60.18:0,60,912	0/0:20,0:20:60.20:0,60,957	0/0:28,0:28:84.27:0,84,1318	0/0:34,0:33:99:0,102,1626	0/0:9,0:9:27.06:0,27,383
chr10	29243526	.	T	TCACA	2772.52	PASS	AB=0.918;AC=34;AF=0.680;AN=50;BaseQRankSum=-4.831;DP=542;FS=0.000;HRun=0;HaplotypeScore=117.4817;InbreedingCoeff=0.3445;MQ=58.27;MQ0=11;MQRankSum=2.707;QD=7.07;ReadPosRankSum=-3.613;VQSLOD=1.3925;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:33:7.36:0,7,64	./.	./.	./.	1/1:22,2:24:5.35:139,5,0	1/1:12,0:12:9.03:155,9,0	1/1:12,7:20:3.01:70,3,0	1/1:22,0:18:5.98:46,6,0	0/0:10,0:20:20.98:0,21,186	1/1:20,0:20:9.03:144,9,0	0/1:17,0:17:2.29:37,0,2	1/1:17,1:18:15.04:247,15,0	1/1:5,4:11:9.03:210,9,0	0/1:19,2:22:36.91:131,0,37	1/1:25,1:26:12.02:186,12,0	0/0:11,0:13:18.04:0,18,237	0/0:15,0:22:15.02:0,15,140	0/0:10,0:13:9.01:0,9,84	1/1:12,0:11:9.88:120,10,0	1/1:9,0:9:3.01:50,3,0	1/1:37,0:35:21.06:358,21,0	1/1:20,1:21:18.04:263,18,0	0/1:17,0:16:3.97:15,0,4	1/1:38,4:42:19.68:347,20,0	0/1:15,0:15:13.92:116,0,14	1/1:22,0:22:12.54:118,13,0	0/1:14,1:15:17.26:113,0,17	0/1:5,0:9:37.19:73,0,37
chr10	29243661	.	AG	A	14893.44	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-2.601;DP=596;FS=4.710;HRun=6;HaplotypeScore=61.9123;InbreedingCoeff=0.9795;MQ=82.20;MQ0=1;MQRankSum=-9.175;QD=27.38;ReadPosRankSum=6.473;VQSLOD=4.7794;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,36:38:96.24:1032,96,0	1/1:0,6:6:18.05:193,18,0	0/0:27,0:27:65.22:0,65,853	0/0:25,0:24:63.19:0,63,785	1/1:2,26:28:72.18:774,72,0	1/1:2,21:23:45.11:484,45,0	1/1:1,17:18:48.12:516,48,0	1/1:2,28:30:81.18:855,81,0	1/1:0,23:23:63.16:677,63,0	1/1:2,23:25:69.09:712,69,0	1/1:1,16:17:48.06:501,48,0	1/1:1,18:19:54.14:580,54,0	1/1:0,12:12:33.08:354,33,0	1/1:2,18:20:48.12:516,48,0	1/1:2,26:28:72.18:774,72,0	1/1:1,24:25:63.16:677,63,0	1/1:1,24:25:66.17:709,66,0	1/1:1,21:22:48.12:514,48,0	1/1:1,15:16:45.04:460,45,0	1/1:3,18:21:54.10:569,54,0	1/1:1,22:23:26.70:638,27,0	1/1:1,23:24:69.09:716,69,0	1/1:2,22:24:63.16:676,63,0	1/1:3,21:24:48.12:516,48,0	1/1:3,14:17:41.47:427,41,0	1/1:1,12:13:36.08:380,36,0	1/1:3,16:19:48.12:516,48,0	1/1:0,4:4:12.03:129,12,0
chr10	29245529	.	A	AT	10661.55	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-14.125;DP=592;FS=2.778;HRun=10;HaplotypeScore=61.1129;InbreedingCoeff=0.9767;MQ=78.11;MQ0=0;MQRankSum=-1.997;QD=24.01;ReadPosRankSum=-0.611;VQSLOD=5.2803;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,114,936	1/1:0,4:4:9.02:96,9,0	0/0:13,0:14:17.90:0,18,178	0/0:14,0:15:16.47:0,16,218	1/1:2,28:30:50.52:730,51,0	1/1:1,18:20:56.98:590,57,0	1/1:5,13:18:36.09:384,36,0	1/1:10,26:38:68.16:774,68,0	0/0:1,0:23:40.74:0,41,118	1/1:4,24:28:69.14:718,69,0	1/1:0,13:13:30.08:320,30,0	1/1:3,18:21:54.14:576,54,0	1/1:2,14:16:14.45:359,14,0	1/1:3,15:18:17.46:391,17,0	1/1:0,19:19:48.12:512,48,0	1/1:5,18:23:48.12:512,48,0	0/0:1,0:30:50.93:0,51,147	0/0:3,0:23:32.58:0,33,94	1/1:4,11:15:35.41:378,35,0	1/1:5,17:22:54.10:563,54,0	1/1:3,9:12:21.05:223,21,0	1/1:1,15:17:41.94:427,42,0	1/1:5,19:24:29.92:614,30,0	1/1:1,12:13:36.09:384,36,0	1/1:2,19:21:29.49:519,29,0	1/1:6,29:35:84.13:856,84,0	1/1:5,20:25:48.12:512,48,0	1/1:6,6:12:21.05:223,21,0
chr10	29246429	.	G	GA	14028.70	PASS	AB=0.548;AC=48;AF=0.857;AN=56;BaseQRankSum=-8.099;DP=625;FS=0.000;HRun=9;HaplotypeScore=68.4451;InbreedingCoeff=0.6595;MQ=76.88;MQ0=0;MQRankSum=-4.998;QD=25.32;ReadPosRankSum=1.039;VQSLOD=5.3957;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:80.94:0,81,703	1/1:2,7:9:18.05:198,18,0	0/0:19,0:21:43.01:0,43,346	0/0:15,0:15:6.11:0,6,222	1/1:5,20:25:31.10:563,31,0	1/1:4,16:20:16.06:405,16,0	1/1:2,27:29:78.21:863,78,0	1/1:6,22:28:45.90:678,46,0	1/1:5,24:29:34.13:604,34,0	1/1:3,23:26:66.17:724,66,0	1/1:3,24:27:75.19:818,75,0	1/1:0,12:12:36.10:398,36,0	1/1:2,17:19:28.09:538,28,0	1/1:3,13:16:42.11:463,42,0	1/1:3,21:24:54.15:597,54,0	1/1:2,20:22:51.10:551,51,0	1/1:1,27:29:78.16:849,78,0	1/1:2,19:21:31.10:570,31,0	1/1:1,10:11:30.07:323,30,0	1/1:2,29:31:84.15:902,84,0	0/1:4,19:23:15:534,0,15	0/1:3,14:17:10:356,0,10	1/1:6,25:31:8.01:532,8,0	1/1:3,24:28:36.97:619,37,0	1/1:2,16:17:33.09:365,33,0	1/1:5,22:27:60.15:655,60,0	1/1:1,25:26:72.19:789,72,0	1/1:1,5:6:12.03:133,12,0
chr10	29246600	.	GA	G	827.60	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=4.247;DP=695;FS=15.266;HRun=1;HaplotypeScore=277.7450;InbreedingCoeff=0.9206;MQ=52.18;MQ0=10;MQRankSum=-7.224;QD=14.27;ReadPosRankSum=3.183;VQSLOD=0.8081;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:42.94:0,43,566	0/0:17,0:17:27.92:0,28,331	0/0:43,0:34:99:0,99,1348	0/0:36,0:32:91.11:0,91,1231	0/0:30,0:29:23.91:0,24,338	0/0:24,0:23:15.04:0,15,191	0/0:24,0:23:21.98:0,22,254	0/0:33,0:33:80.14:0,80,982	1/1:2,20:27:40.52:447,41,0	0/0:27,0:26:58.84:0,59,668	0/0:19,0:19:14.83:0,15,193	0/0:22,0:22:11.52:0,12,109	0/0:20,0:20:29.85:0,30,292	0/0:26,0:25:27.02:0,27,352	0/0:43,0:43:41:0,41,537	0/0:25,0:26:14.89:0,15,124	1/1:0,4:12:14.97:139,15,0	1/1:1,9:16:38.11:382,38,0	0/0:18,0:18:40.29:0,40,383	0/0:20,0:18:18.01:0,18,224	0/0:16,0:15:18.06:0,18,259	0/0:23,0:24:15.03:0,15,187	0/0:24,0:21:20.92:0,21,289	0/0:19,0:19:8.86:0,9,107	0/0:34,0:35:36.10:0,36,491	0/0:20,0:18:41.99:0,42,505	0/0:26,0:25:59.55:0,60,676	0/0:6,0:6:12.03:0,12,154
chr10	29246620	.	CACACAT	C	2253.61	PASS	AB=0.984;AC=23;AF=0.411;AN=56;BaseQRankSum=0.489;DP=744;FS=1.600;HRun=0;HaplotypeScore=306.0459;InbreedingCoeff=-0.0886;MQ=41.60;MQ0=13;MQRankSum=-0.423;QD=5.04;ReadPosRankSum=-5.361;VQSLOD=1.0084;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:38,0:38:88.51:89,0,267	0/1:21,0:21:3.10:3,0,92	0/0:38,0:24:62.82:0,63,1208	0/0:35,0:26:61.81:0,62,1214	0/0:30,0:29:5.63:0,6,76	0/1:26,0:24:12.69:13,0,33	0/1:25,0:24:12.38:12,0,154	0/1:39,0:39:99:234,0,959	1/1:17,19:36:62.17:1035,62,0	0/1:30,0:29:99:101,0,736	0/1:23,0:23:14.15:14,0,88	0/0:24,0:24:2.06:0,2,35	0/0:30,0:30:0.47:0,0,159	0/0:24,0:23:8.88:0,9,146	0/0:40,0:40:14.47:0,14,229	0/0:27,0:27:3.46:0,3,78	1/1:20,3:23:31.88:277,32,0	0/1:16,6:21:7.60:484,0,8	0/1:18,0:18:29.08:29,0,501	0/1:22,0:20:0:0,0,0	0/1:16,0:15:12.90:13,0,90	1/1:29,0:29:3.06:17,3,0	1/1:26,0:23:0.12:0,0,0	0/0:16,0:16:3.01:0,3,48	0/0:33,0:32:10.61:0,11,165	0/1:26,0:24:59.73:60,0,656	0/1:23,0:22:22.27:22,0,296	1/1:4,0:4:0.47:1,0,0
chr10	29246624	.	CAT	C	2770.67	PASS	AB=0.943;AC=35;AF=0.625;AN=56;BaseQRankSum=1.092;DP=742;FS=4.413;HRun=0;HaplotypeScore=291.1347;InbreedingCoeff=0.1107;MQ=41.17;MQ0=12;MQRankSum=2.489;QD=4.40;ReadPosRankSum=-2.431;VQSLOD=2.0190;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:36,0:36:20.71:95,0,21	1/1:21,0:22:5.56:54,6,0	0/0:36,0:22:35.68:0,36,411	0/0:33,0:23:40:0,40,335	0/1:27,0:29:0.06:0,0,0	1/1:24,2:24:2.37:16,2,0	0/1:23,1:23:24.03:34,0,24	0/1:39,0:39:99:403,0,105	1/1:40,0:40:74.06:709,74,0	0/1:28,1:30:99:282,0,104	1/1:22,0:23:1.76:43,2,0	1/1:26,1:27:6.65:46,7,0	1/1:27,2:30:14.61:104,15,0	0/0:21,3:24:4.41:0,4,19	0/1:34,2:40:0.25:55,0,0	0/1:26,1:27:0.83:41,0,1	1/1:20,1:21:19.83:171,20,0	1/1:22,0:22:34.79:313,35,0	0/1:19,0:19:89.88:90,0,94	0/1:19,2:19:0:0,0,0	1/1:15,0:14:2.98:22,3,0	1/1:28,1:30:5.75:48,6,0	1/1:22,0:20:0.44:1,0,0	0/0:14,1:15:0:0,0,0	0/1:30,1:31:1.58:19,0,2	0/1:25,3:26:36.03:237,0,36	1/1:24,0:23:5.68:131,6,0	0/0:4,0:4:0.47:0,0,1
chr10	29246633	.	ACT	A	144.47	PASS	AB=0.993;AC=14;AF=0.250;AN=56;BaseQRankSum=5.643;DP=750;FS=41.410;HRun=0;HaplotypeScore=332.5119;InbreedingCoeff=-0.0263;MQ=42.03;MQ0=8;MQRankSum=-4.550;QD=0.38;ReadPosRankSum=-0.963;VQSLOD=1.3366;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:31,2:34:2.29:2,0,157	0/1:18,0:18:27.75:28,0,30	0/0:33,0:21:39.15:0,39,795	0/0:28,0:20:19.26:0,19,514	0/1:36,0:35:0.13:0,0,0	0/0:28,0:26:11.38:0,11,91	0/0:20,0:20:11.70:0,12,167	0/0:36,0:36:85.16:0,85,1040	0/0:40,0:40:70.67:0,71,493	0/1:34,0:33:36.09:36,0,761	0/0:20,2:22:5.67:0,6,66	0/1:30,0:30:10.31:22,0,10	0/1:29,0:29:59.25:59,0,134	0/0:34,0:33:7.42:0,7,55	0/1:42,0:42:38.32:38,0,65	0/1:29,0:29:18.68:19,0,81	0/0:24,0:24:34.07:0,34,316	0/0:20,0:20:42:0,42,354	0/0:15,0:15:33.56:0,34,467	0/0:22,0:20:2.97:0,3,20	0/0:12,0:12:2.94:0,3,18	0/1:28,0:28:0.24:0,0,0	0/1:23,0:21:0:0,0,0	1/1:14,0:14:0.10:1,0,0	0/1:34,0:33:0.58:21,0,1	0/0:33,0:32:1.53:0,2,697	0/1:28,0:27:43.29:43,0,203	0/0:4,0:4:2.72:0,3,20
chr10	29246686	.	AACATACAC	A	23192.82	PASS	AB=0.539;AC=42;AF=0.750;AN=56;BaseQRankSum=8.574;DP=833;FS=12.419;HRun=0;HaplotypeScore=306.8305;InbreedingCoeff=0.7520;MQ=46.04;MQ0=3;MQRankSum=-9.913;QD=38.85;ReadPosRankSum=-1.127;VQSLOD=3.1230;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:34:16.79:0,17,2190	1/1:1,13:14:21.03:490,21,0	0/0:43,0:30:65.17:0,65,2044	0/0:38,0:25:63.91:0,64,1869	1/1:0,37:37:44.94:1027,45,0	1/1:1,21:22:23.99:555,24,0	1/1:1,18:19:14.98:304,15,0	1/1:5,24:29:69.17:1511,69,0	0/0:41,0:41:99:0,102,4232	1/1:3,38:41:99:2742,108,0	1/1:1,19:20:18.06:450,18,0	1/1:1,36:37:54.18:1357,54,0	1/1:1,39:40:66.23:1824,66,0	1/1:1,38:39:57.19:1487,57,0	1/1:2,34:36:63.22:1699,63,0	0/1:5,28:33:71.27:1367,0,71	0/0:41,0:41:93.62:0,94,4137	0/0:38,0:38:99:0,108,4102	0/1:3,19:21:11.86:1018,0,12	1/1:0,25:25:45.11:1045,45,0	1/1:2,15:17:3.01:83,3,0	1/1:3,25:28:36.08:933,36,0	1/1:2,25:27:38.80:969,39,0	1/1:4,17:21:5.91:120,6,0	1/1:3,17:20:18.06:498,18,0	1/1:1,33:34:99:2392,99,0	1/1:2,26:28:45.09:1118,45,0	1/1:0,8:8:9.03:203,9,0
chr10	29247770	.	GCT	G	2591.92	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=10.725;DP=645;FS=3.779;HRun=0;HaplotypeScore=79.0066;InbreedingCoeff=0.9958;MQ=71.95;MQ0=0;MQRankSum=0.447;QD=37.03;ReadPosRankSum=4.372;VQSLOD=5.9494;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:66.23:0,66,1218	0/0:7,0:7:21.07:0,21,386	0/0:9,0:9:27.09:0,27,505	0/0:10,0:10:23.06:0,23,448	0/0:24,0:24:72.21:0,72,1271	0/0:28,0:28:84.29:0,84,1550	0/0:19,0:19:57.20:0,57,1068	0/0:23,0:23:69.23:0,69,1259	1/1:0,25:25:63.21:928,63,0	0/0:25,0:25:72.24:0,72,1311	0/0:34,0:34:99:0,99,1807	0/0:20,0:20:60.21:0,60,1113	0/0:24,0:24:69.24:0,69,1292	0/0:17,0:17:48.16:0,48,899	0/0:31,0:31:93.29:0,93,1669	0/0:23,0:23:69.24:0,69,1292	1/1:2,23:25:66.22:972,66,0	1/1:0,20:20:57.19:835,57,0	0/0:29,0:29:84.28:0,84,1537	0/0:31,0:31:93.31:0,93,1706	0/0:28,0:27:84.27:0,84,1541	0/0:36,0:36:99:0,105,1862	0/0:35,0:35:99:0,102,1898	0/0:12,0:12:36.12:0,36,664	0/0:19,0:19:57.20:0,57,1068	0/0:24,0:24:72.24:0,72,1305	0/0:35,0:35:99:0,105,1903	0/0:7,0:7:21.07:0,21,374
chr10	29248372	.	CAA	C	5750.80	PASS	AB=0.679;AC=45;AF=0.804;AN=56;BaseQRankSum=-4.162;DP=602;FS=1.934;HRun=15;HaplotypeScore=79.2268;InbreedingCoeff=0.7822;MQ=72.00;MQ0=2;MQRankSum=1.203;QD=11.55;ReadPosRankSum=5.083;VQSLOD=4.0199;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:19,2:35:7.74:8,0,140	1/1:2,9:12:4.86:198,5,0	0/0:19,0:10:13.68:0,14,99	0/0:15,0:13:10.60:0,11,72	1/1:12,14:30:27.75:321,28,0	1/1:8,15:24:25.72:359,26,0	1/1:8,14:25:44:352,44,0	1/1:12,10:24:31.22:269,31,0	0/0:6,0:26:11.99:0,12,120	1/1:11,12:25:39.54:328,40,0	1/1:4,8:16:24.54:177,25,0	1/1:7,6:13:8.81:79,9,0	1/1:11,12:24:32.53:276,33,0	1/1:7,11:21:20.38:210,20,0	1/1:11,21:32:53.76:474,54,0	1/1:6,17:25:44.35:381,44,0	0/0:12,0:33:35.94:0,36,345	0/0:2,0:10:5.99:0,6,55	1/1:11,8:20:26.35:207,26,0	1/1:9,14:26:16.30:186,16,0	1/1:5,9:15:23.71:197,24,0	1/1:8,10:21:38.03:297,38,0	1/1:9,8:19:29.16:231,29,0	1/1:4,7:14:29.10:220,29,0	1/1:4,14:19:38.67:329,39,0	1/1:8,13:22:23.64:255,24,0	1/1:7,20:30:26.93:370,27,0	1/1:2,3:5:2.96:26,3,0
chr10	29248695	.	GGATAAGTCTAAA	G	1622.95	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.743;DP=649;FS=3.375;HRun=0;HaplotypeScore=217.9078;InbreedingCoeff=0.9958;MQ=81.47;MQ0=0;MQRankSum=-6.350;QD=67.62;ReadPosRankSum=-0.906;VQSLOD=3.4506;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:2,22:24:48.16:1718,48,0	0/0:12,0:12:36.12:0,36,2219	0/0:25,0:25:66.21:0,66,2858	0/0:15,0:15:45.15:0,45,2290	0/0:30,0:30:87.27:0,87,4815	0/0:20,0:20:54.19:0,54,3242	0/0:21,0:21:60.21:0,60,3413	0/0:25,0:25:72.23:0,72,3617	0/0:17,0:17:51.18:0,51,3085	0/0:34,0:34:99:0,102,5650	0/0:19,0:19:57.20:0,57,3420	0/0:22,0:22:63.13:0,63,3385	0/0:23,0:23:66.23:0,66,4041	0/0:23,0:23:69.17:0,69,3823	0/0:26,0:26:78.27:0,78,4464	0/0:19,0:19:57.17:0,57,3087	0/0:28,0:28:81.21:0,81,4073	0/0:16,0:16:48.14:0,48,2604	0/0:22,0:22:60.21:0,60,3604	0/0:25,0:25:75.24:0,75,4389	0/0:24,0:24:56.98:0,57,3677	0/0:25,0:25:75.26:0,75,4586	0/0:19,0:19:57.18:0,57,3275	0/0:31,0:31:87.24:0,87,4837	0/0:27,0:27:78.27:0,78,4783	0/0:35,0:35:99:0,102,6049	0/0:31,0:31:90.31:0,90,5213	0/0:11,0:11:21.07:0,21,1298
chr10	29248826	.	TGTGAGAGAGAGA	T	5049.13	PASS	AB=0.997;AC=25;AF=0.446;AN=56;BaseQRankSum=5.886;DP=494;FS=53.795;HRun=0;HaplotypeScore=199.7568;InbreedingCoeff=-0.1444;MQ=42.65;MQ0=14;MQRankSum=-5.253;QD=15.03;ReadPosRankSum=8.436;VQSLOD=2.0842;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:14:0.88:2,1,0	0/1:5,0:5:21.45:97,0,21	0/0:27,0:12:36.12:0,36,1471	0/0:26,0:15:41.20:0,41,1728	0/0:14,5:19:20.42:0,20,193	1/1:17,0:17:18.04:315,18,0	0/1:26,0:26:54.73:256,0,55	0/1:18,0:17:87.49:698,0,87	0/0:21,0:21:24.02:0,24,399	0/1:20,1:20:97.26:587,0,97	0/1:8,0:8:30.54:31,0,35	1/1:17,0:17:4.57:416,5,0	1/1:13,2:14:11.77:487,12,0	1/1:16,2:18:18.06:454,18,0	0/1:18,0:18:12.66:61,0,13	0/1:11,0:10:24.28:178,0,24	0/0:22,0:22:21.85:0,22,267	0/1:15,0:13:91.64:167,0,92	0/1:8,0:6:41.67:158,0,42	0/1:16,0:16:8.73:9,0,29	0/0:23,0:21:20.94:0,21,178	0/1:14,0:14:35.49:87,0,35	0/0:14,0:13:14.94:0,15,145	0/1:30,0:29:13.90:14,0,38	0/1:12,0:12:25.22:25,0,45	0/1:30,0:30:99:986,0,236	0/1:23,0:23:23.04:23,0,193	0/0:6,0:6:7.06:0,7,131
chr10	29248828	.	TGAGAGAGAGA	T	7573.74	PASS	AB=0.721;AC=42;AF=0.778;AN=54;BaseQRankSum=2.688;DP=479;FS=8.152;HRun=0;HaplotypeScore=175.5877;InbreedingCoeff=0.5071;MQ=45.42;MQ0=13;MQRankSum=-4.289;QD=21.04;ReadPosRankSum=4.655;VQSLOD=3.1589;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:8,6:14:0.47:1,0,0	1/1:1,2:5:9.50:160,9,0	0/0:32,0:17:51.17:0,51,2058	0/0:26,0:15:39.13:0,39,1806	0/1:12,1:18:4.11:4,0,11	1/1:2,13:15:17.65:463,18,0	0/1:5,20:25:0.96:392,0,1	1/1:5,11:15:32.99:798,33,0	0/0:13,1:21:14.27:0,14,196	1/1:11,5:19:21.11:743,21,0	1/1:4,1:8:5.23:72,5,0	1/1:2,15:17:23.82:755,24,0	1/1:3,12:14:20.80:576,21,0	1/1:2,16:18:18.06:558,18,0	1/1:5,6:17:18.03:247,18,0	1/1:3,4:10:21:324,21,0	0/0:18,0:21:7.57:0,8,123	0/1:8,0:11:34.60:173,0,35	1/1:5,1:6:11.01:255,11,0	1/1:3,7:16:11.62:109,12,0	./.	1/1:2,12:14:6.02:166,6,0	1/1:8,5:13:5.97:34,6,0	1/1:16,7:29:4.37:68,4,0	1/1:6,0:9:8.01:94,8,0	1/1:12,13:30:54.10:1379,54,0	1/1:9,7:21:17.89:170,18,0	0/1:5,0:6:12.79:31,0,13
chr10	29250021	.	G	GAA	20157.54	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-11.005;DP=608;FS=1.483;HRun=7;HaplotypeScore=70.5215;InbreedingCoeff=0.9992;MQ=83.79;MQ0=0;MQRankSum=-4.755;QD=38.99;ReadPosRankSum=2.067;VQSLOD=4.5859;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,0:30:69.87:246,70,0	1/1:0,12:12:33.11:542,33,0	0/0:17,0:17:36.92:0,37,404	0/0:21,0:21:41.69:0,42,459	1/1:3,29:32:87.30:1427,87,0	1/1:0,21:22:65.71:1043,66,0	1/1:1,16:18:51.17:816,51,0	1/1:5,28:34:87.27:1365,87,0	0/0:18,0:18:48.12:0,48,547	1/1:5,16:21:48.12:753,48,0	1/1:0,17:17:48.12:758,48,0	1/1:1,13:14:36.12:591,36,0	1/1:4,16:20:45.15:729,45,0	1/1:4,17:21:42.03:689,42,0	1/1:3,16:19:48.08:756,48,0	1/1:3,24:27:63.22:1034,63,0	0/0:23,0:23:69.21:0,69,804	0/0:12,0:12:33.06:0,33,369	1/1:5,30:35:90.27:1448,90,0	1/1:4,25:29:75.21:1201,75,0	1/1:2,22:24:51.17:837,51,0	1/1:4,13:17:39.13:635,39,0	1/1:2,15:17:36.12:588,36,0	1/1:0,12:12:33.11:542,33,0	1/1:1,14:15:36.12:591,36,0	1/1:2,31:33:93.30:1500,93,0	1/1:3,35:38:99:1672,102,0	1/1:0,9:9:24.08:394,24,0
chr10	29251572	.	GTTATTATTATTA	G	2016.50	PASS	AB=0.758;AC=32;AF=0.842;AN=38;BaseQRankSum=1.532;DP=203;FS=1.594;HRun=0;HaplotypeScore=77.1634;InbreedingCoeff=0.0311;MQ=57.64;MQ0=2;MQRankSum=-1.726;QD=14.00;ReadPosRankSum=0.911;VQSLOD=1.8466;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:3.01:0,3,163	1/1:4,2:6:6.02:206,6,0	./.	./.	1/1:5,2:7:3.01:103,3,0	1/1:3,3:7:12.04:378,12,0	./.	0/0:27,0:27:0:0,0,0	1/1:2,0:4:3.01:84,3,0	1/1:6,0:6:3.01:56,3,0	1/1:2,2:4:3.01:103,3,0	./.	1/1:4,2:6:3.01:103,3,0	1/1:5,0:5:3.01:69,3,0	1/1:2,2:4:3.01:103,3,0	./.	1/1:18,0:24:2.54:83,3,0	1/1:10,0:19:8.95:251,9,0	1/1:7,4:11:9.35:166,9,0	./.	1/1:5,0:5:6.02:113,6,0	./.	./.	./.	1/1:5,4:10:8.61:229,9,0	0/1:2,0:6:35.31:35,0,37	0/1:10,0:11:11.70:12,0,106	1/1:4,0:8:2.99:24,3,0
chr10	29252913	.	CA	C	18009.57	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=2.937;DP=691;FS=6.930;HRun=4;HaplotypeScore=113.3694;InbreedingCoeff=0.9995;MQ=78.27;MQ0=1;MQRankSum=-3.663;QD=30.42;ReadPosRankSum=4.481;VQSLOD=4.1537;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,32:33:87.27:1042,87,0	1/1:0,9:9:24.07:288,24,0	0/0:21,0:20:44.30:0,44,628	0/0:21,0:21:48.09:0,48,745	1/1:2,36:38:99:1154,99,0	1/1:2,23:25:60.18:719,60,0	1/1:1,30:31:84.26:1007,84,0	1/1:0,31:31:92.41:1007,92,0	0/0:16,0:16:48.14:0,48,639	1/1:1,26:27:75.17:871,75,0	1/1:0,22:22:54.12:631,54,0	1/1:3,29:32:72.22:862,72,0	1/1:1,18:19:48.15:575,48,0	1/1:0,26:26:69.21:827,69,0	1/1:0,26:26:69.08:827,69,0	1/1:1,23:24:60.18:719,60,0	0/0:23,0:23:60.13:0,60,778	0/0:18,0:18:54.15:0,54,731	1/1:2,22:24:66.18:767,66,0	1/1:2,26:28:63.01:703,63,0	1/1:2,25:27:66.20:791,66,0	1/1:2,23:25:60.18:716,60,0	1/1:1,18:19:51.16:610,51,0	1/1:2,25:27:66.15:774,66,0	1/1:2,24:26:63.19:755,63,0	1/1:0,21:21:63.05:710,63,0	1/1:0,38:38:99:1222,102,0	1/1:0,14:14:36.11:431,36,0
chr10	29253010	.	AT	A	1169.09	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.173;DP=807;FS=23.474;HRun=3;HaplotypeScore=129.1492;InbreedingCoeff=0.9842;MQ=80.42;MQ0=0;MQRankSum=-4.692;QD=33.40;ReadPosRankSum=2.708;VQSLOD=1.6515;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,35:35:99:1264,102,0	0/0:6,0:6:18.05:0,18,240	0/0:16,0:16:42.14:0,42,605	0/0:24,0:23:56.37:0,56,673	0/0:29,0:29:84.28:0,84,1208	0/0:32,0:32:90.29:0,90,1276	0/0:27,0:27:81.23:0,81,1127	0/0:29,0:29:87.26:0,87,1190	0/0:34,0:34:99:0,102,1468	0/0:30,0:30:87.29:0,87,1239	0/0:26,0:26:72.23:0,72,1014	0/0:39,0:39:99:0,117,1664	0/0:36,0:36:99:0,108,1554	0/0:35,0:35:99:0,102,1468	0/0:35,0:35:99:0,102,1465	0/0:33,0:33:99:0,99,1425	0/0:20,0:20:60.19:0,60,842	0/0:13,0:13:39.13:0,39,561	0/0:38,0:38:99:0,111,1577	0/0:40,0:39:99:0,120,1726	0/0:46,0:46:99:0,135,1939	0/0:28,0:28:81.27:0,81,1166	0/0:29,0:29:87.28:0,87,1233	0/0:31,0:31:87.29:0,87,1253	0/0:20,0:20:57.19:0,57,820	0/0:35,0:35:99:0,102,1432	0/0:35,0:35:99:0,102,1467	0/0:6,0:6:18.06:0,18,259
chr10	29253444	.	T	TC	2256.48	PASS	AB=0.542;AC=5;AF=0.089;AN=56;BaseQRankSum=0.083;DP=735;FS=0.492;HRun=3;HaplotypeScore=69.5323;InbreedingCoeff=0.8328;MQ=85.87;MQ0=0;MQRankSum=-1.937;QD=32.70;ReadPosRankSum=0.737;VQSLOD=3.9790;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,112,1319	0/0:14,0:14:42.11:0,42,488	0/0:23,0:23:59.92:0,60,690	0/0:28,0:28:77:0,77,865	0/0:22,0:22:63.17:0,63,734	0/0:26,0:26:75.23:0,75,899	0/0:34,0:34:99:0,99,1178	0/0:34,0:34:96.29:0,96,1143	1/1:1,25:26:72.20:985,72,0	0/0:33,0:33:99:0,99,1176	0/0:29,0:29:84.26:0,84,1008	0/0:29,0:29:84.23:0,84,986	0/0:23,0:23:63.18:0,63,743	0/0:25,0:25:75.21:0,75,880	0/0:24,0:24:69.20:0,69,815	0/0:21,0:21:63.17:0,63,733	0/1:4,22:26:5.75:771,0,6	1/1:0,17:17:45.15:629,45,0	0/0:26,0:26:72.22:0,72,863	0/0:33,0:33:96.27:0,96,1129	0/0:17,0:17:45.12:0,45,528	0/0:30,0:30:90.25:0,90,1065	0/0:18,0:18:51.16:0,51,611	0/0:24,0:24:69.19:0,69,804	0/0:41,0:41:99:0,117,1391	0/0:26,0:26:78.22:0,78,917	0/0:34,0:33:99:0,99,1175	0/0:12,0:12:33.10:0,33,396
chr10	29254042	.	A	AT	14763.97	PASS	AB=1.000;AC=47;AF=0.839;AN=56;BaseQRankSum=-7.846;DP=579;FS=8.622;HRun=8;HaplotypeScore=93.8857;InbreedingCoeff=0.8008;MQ=72.64;MQ0=0;MQRankSum=-0.185;QD=27.80;ReadPosRankSum=2.648;VQSLOD=4.7588;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,25:25:60.18:692,60,0	1/1:1,13:14:39.12:450,39,0	0/0:14,0:13:4.25:0,4,202	0/1:15,0:13:8.89:9,0,73	1/1:2,24:26:75.21:851,75,0	1/1:2,25:27:72.21:831,72,0	1/1:3,23:26:63.15:712,63,0	1/1:4,29:33:87.24:993,87,0	0/0:14,0:14:27.02:0,27,248	1/1:6,25:31:78.23:899,78,0	1/1:2,16:18:45.13:519,45,0	1/1:2,16:18:48.14:554,48,0	1/1:10,28:38:78.17:869,78,0	1/1:1,18:19:48.14:554,48,0	1/1:3,10:13:30.09:346,30,0	1/1:3,21:24:57.17:658,57,0	0/0:12,0:12:18.01:0,18,164	0/0:8,0:8:9:0,9,82	1/1:3,17:20:54.15:614,54,0	1/1:4,27:31:84.25:964,84,0	1/1:2,10:12:24.07:277,24,0	1/1:1,15:16:42.12:482,42,0	1/1:2,14:16:42.12:485,42,0	1/1:3,16:20:47.82:554,48,0	1/1:1,26:27:75.22:866,75,0	1/1:4,15:20:48.11:540,48,0	1/1:3,31:33:62.86:977,63,0	1/1:6,2:8:6.02:69,6,0
chr10	29254070	.	A	ACAAAT	811.09	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=2.785;DP=581;FS=20.660;HRun=0;HaplotypeScore=186.5001;InbreedingCoeff=0.9325;MQ=65.21;MQ0=0;MQRankSum=-5.109;QD=23.17;ReadPosRankSum=1.057;VQSLOD=1.8208;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:69.17:0,69,1365	0/0:12,0:12:36.12:0,36,774	0/0:12,0:12:32.64:0,33,488	0/0:14,0:12:20.85:0,21,311	0/0:27,0:27:81.27:0,81,1711	0/0:28,0:28:84.27:0,84,1823	0/0:24,0:24:69.21:0,69,1439	0/0:33,0:32:99:0,99,1977	1/1:1,13:14:21.07:608,21,0	0/0:27,0:27:81.28:0,81,1776	0/0:18,0:18:54.17:0,54,1051	0/0:17,0:17:48.15:0,48,1012	0/0:34,0:34:90.28:0,90,1863	0/0:18,0:18:51.15:0,51,1026	0/0:20,0:20:57.18:0,57,1084	0/0:16,0:16:48.16:0,48,1066	1/1:2,6:10:5.69:107,6,0	1/1:2,6:11:9.02:224,9,0	0/0:22,0:22:66.20:0,66,1288	0/0:30,0:30:84.27:0,84,1773	0/0:9,0:9:27.09:0,27,584	0/0:15,0:15:45.15:0,45,1008	0/0:19,0:19:57.18:0,57,1219	0/0:18,0:18:54.17:0,54,1138	0/0:35,0:35:99:0,105,2092	0/0:26,0:26:78.25:0,78,1548	0/0:38,0:37:99:0,114,2268	0/0:9,0:9:27.09:0,27,558
chr10	29254231	.	T	TA	793.16	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.095;DP=567;FS=12.621;HRun=3;HaplotypeScore=83.5736;InbreedingCoeff=0.9416;MQ=73.53;MQ0=0;MQRankSum=-7.191;QD=24.79;ReadPosRankSum=-0.965;VQSLOD=1.9532;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:54.18:0,54,701	0/0:6,0:6:18.06:0,18,234	0/0:15,0:15:39.13:0,39,500	0/0:4,0:4:9.03:0,9,117	0/0:26,0:26:75.24:0,75,974	0/0:23,0:23:69.20:0,69,876	0/0:16,0:16:45.14:0,45,575	0/0:35,0:35:96.30:0,96,1221	1/1:1,15:16:42.10:603,42,0	0/0:36,0:36:99:0,102,1324	0/0:35,0:35:99:0,102,1309	0/0:20,0:20:51.13:0,51,648	0/0:23,0:23:66.21:0,66,854	0/0:15,0:15:45.15:0,45,584	0/0:21,0:21:63.20:0,63,818	0/0:21,1:22:18.36:0,18,734	1/1:2,8:10:15.01:191,15,0	1/1:0,6:6:9.03:135,9,0	0/0:22,0:22:63.20:0,63,818	0/0:34,0:34:99:0,102,1323	0/0:6,0:6:15.05:0,15,195	0/0:15,0:15:42.12:0,42,531	0/0:33,0:33:99:0,99,1269	0/0:10,0:10:30.10:0,30,390	0/0:26,0:26:78.24:0,78,999	0/0:21,0:21:63.20:0,63,806	0/0:37,0:37:99:0,102,1280	0/0:15,0:15:42.14:0,42,545
chr10	29254482	.	GATGA	G	593.94	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=6.281;DP=611;FS=0.000;HRun=0;HaplotypeScore=184.6911;InbreedingCoeff=0.9151;MQ=62.58;MQ0=4;MQRankSum=-5.116;QD=24.75;ReadPosRankSum=-3.627;VQSLOD=2.4380;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:76.14:0,76,1381	0/0:4,0:4:9.03:0,9,160	0/0:30,0:17:39.52:0,40,595	0/0:30,0:18:37.85:0,38,489	0/0:17,0:17:51.14:0,51,879	0/0:18,0:18:54.18:0,54,996	0/0:29,0:29:42.20:0,42,1304	0/0:24,0:24:56.52:0,57,843	1/1:11,4:15:39.11:522,39,0	0/0:26,0:26:66.03:0,66,1099	0/0:26,0:26:74.98:0,75,1248	0/0:26,0:26:60.53:0,61,1163	0/0:28,0:28:80.08:0,80,1469	0/0:28,0:28:81.26:0,81,1476	0/0:25,0:25:70.69:0,71,1232	0/0:25,0:25:70.33:0,70,1127	1/1:3,2:5:9.03:134,9,0	1/1:3,0:3:5.98:67,6,0	0/0:31,0:31:87.04:0,87,1379	0/0:12,0:12:33.10:0,33,570	0/0:53,0:52:99:0,129,2430	0/0:13,0:13:35.59:0,36,610	0/0:6,0:6:18.01:0,18,273	0/0:27,0:27:76.49:0,76,1394	0/0:20,0:20:60.18:0,60,1047	0/0:27,0:27:70.47:0,70,1202	0/0:22,0:22:62.05:0,62,1133	0/0:10,0:10:27.09:0,27,453
chr10	29254495	.	AAG	A	151.11	PASS	AC=4;AF=0.074;AN=54;BaseQRankSum=6.565;DP=602;FS=1.034;HRun=0;HaplotypeScore=154.9039;InbreedingCoeff=0.9304;MQ=65.98;MQ0=3;MQRankSum=-3.765;QD=8.89;ReadPosRankSum=-0.785;VQSLOD=3.1883;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:99:0,99,1925	0/0:3,0:3:9.03:0,9,162	0/0:25,0:16:17.67:0,18,628	0/0:29,2:20:33.31:0,33,638	0/0:17,0:17:51.17:0,51,1014	0/0:19,0:19:57.15:0,57,1094	0/0:28,0:28:80.82:0,81,1531	0/0:21,0:21:63.22:0,63,1255	1/1:8,4:12:24.99:213,25,0	0/0:23,0:23:69.24:0,69,1383	0/0:23,0:23:69.23:0,69,1364	0/0:23,0:23:69.24:0,69,1351	0/0:28,0:28:84.27:0,84,1657	0/0:29,0:29:86.33:0,86,1713	0/0:24,0:24:72.25:0,72,1462	0/0:21,0:21:60.21:0,60,1218	1/1:4,1:4:8.71:51,9,0	./.	0/0:30,0:30:90.31:0,90,1793	0/0:13,0:13:36.12:0,36,703	0/0:59,0:57:99:0,157,3137	0/0:12,0:12:33.11:0,33,670	0/0:7,0:7:21.07:0,21,421	0/0:27,0:27:81.23:0,81,1580	0/0:21,0:21:63.22:0,63,1236	0/0:23,0:23:66.23:0,66,1320	0/0:25,0:25:75.26:0,75,1522	0/0:18,0:18:51.17:0,51,941
chr10	29254503	.	ATG	A	57.54	PASS	AB=0.769;AC=3;AF=0.056;AN=54;BaseQRankSum=5.722;DP=579;FS=1.123;HRun=0;HaplotypeScore=150.3864;InbreedingCoeff=0.4112;MQ=66.33;MQ0=3;MQRankSum=-4.080;QD=4.43;ReadPosRankSum=-0.989;VQSLOD=2.8388;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,108,2143	0/0:2,0:2:6:0,6,85	0/0:26,0:18:16.08:0,16,531	0/0:33,0:19:38.40:0,38,650	0/0:17,0:17:51.16:0,51,989	0/0:16,0:16:42.14:0,42,840	0/0:25,0:26:74.57:0,75,1483	0/0:21,0:21:63.20:0,63,1240	0/1:7,3:10:14.52:108,0,15	0/0:23,0:23:69.24:0,69,1400	0/0:23,0:23:69.24:0,69,1370	0/0:21,0:21:63.20:0,63,1218	0/0:26,0:26:78.27:0,78,1578	0/0:32,0:32:96.33:0,96,1923	0/0:21,0:21:63.22:0,63,1280	0/0:21,0:21:63.21:0,63,1251	1/1:1,2:2:1.74:39,2,0	./.	0/0:27,0:27:81.28:0,81,1623	0/0:11,0:11:30.10:0,30,609	0/0:58,0:57:99:0,153,3036	0/0:13,0:13:36.12:0,36,701	0/0:9,0:9:27.09:0,27,542	0/0:27,0:27:81.28:0,81,1639	0/0:20,0:20:60.21:0,60,1185	0/0:20,0:20:60.21:0,60,1210	0/0:22,0:22:66.23:0,66,1308	0/0:13,0:13:39.13:0,39,786
chr10	29254527	.	GTA	G	325.41	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=6.054;DP=623;FS=0.000;HRun=0;HaplotypeScore=141.1837;InbreedingCoeff=0.8312;MQ=67.46;MQ0=8;MQRankSum=-5.730;QD=21.69;ReadPosRankSum=-1.524;VQSLOD=3.4283;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,108,2138	0/0:2,0:2:6.02:0,6,121	0/0:37,0:25:48.52:0,49,1086	0/0:41,0:25:8.50:0,9,524	0/0:18,0:18:54.11:0,54,895	0/0:14,0:14:39.12:0,39,731	0/0:25,0:25:72.23:0,72,1394	0/0:23,0:23:69.18:0,69,1268	1/1:0,10:11:32.67:351,33,0	0/0:20,0:20:60.19:0,60,1130	0/0:22,0:22:60.18:0,60,1094	0/0:23,0:23:67.11:0,67,1263	0/0:19,0:19:42.16:0,42,842	0/0:30,0:30:90.29:0,90,1707	0/0:25,0:25:73:0,73,1330	0/0:21,0:21:63.22:0,63,1261	1/1:1,2:3:5.61:54,6,0	1/1:0,1:1:3.01:44,3,0	0/0:26,0:25:75.24:0,75,1434	0/0:13,0:13:39.12:0,39,723	0/0:65,0:62:99:0,170,3173	0/0:19,0:19:56.81:0,57,1044	0/0:15,0:15:31.16:0,31,815	0/0:32,0:31:90.29:0,90,1747	0/0:18,0:18:54.15:0,54,958	0/0:22,0:22:66.22:0,66,1269	0/0:19,0:19:57.18:0,57,1082	0/0:20,0:20:60.19:0,60,1164
chr10	29254536	.	GAGAA	G	265.72	PASS	AB=0.875;AC=5;AF=0.089;AN=56;BaseQRankSum=6.788;DP=642;FS=4.506;HRun=0;HaplotypeScore=168.5076;InbreedingCoeff=0.7073;MQ=65.54;MQ0=7;MQRankSum=-4.988;QD=12.08;ReadPosRankSum=-0.999;VQSLOD=2.7658;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,108,2767	0/0:3,0:3:8.96:0,9,180	0/0:38,0:26:59.40:0,59,1134	0/0:45,0:25:39.13:0,39,618	0/0:17,0:17:48.15:0,48,1166	0/0:13,0:13:39.13:0,39,996	0/0:27,0:27:79.74:0,80,1801	0/0:24,0:24:66.21:0,66,1530	1/1:6,7:13:30.15:354,30,0	0/0:20,0:20:57.20:0,57,1463	0/0:21,0:21:60.20:0,60,1452	0/0:22,0:22:63.20:0,63,1629	0/0:18,0:18:42.05:0,42,1116	0/0:31,0:31:90.31:0,90,2314	0/0:26,0:26:75.24:0,75,1819	0/0:23,0:23:69.23:0,69,1656	0/1:6,1:7:6.48:8,0,6	1/1:2,0:2:1.31:14,1,0	0/0:28,0:28:81.25:0,81,1862	0/0:16,0:16:23.19:0,23,1026	0/0:65,0:62:99:0,142,4038	0/0:18,0:18:54.19:0,54,1430	0/0:15,0:15:45.15:0,45,1180	0/0:33,0:32:93.30:0,93,2358	0/0:18,0:18:45.15:0,45,1184	0/0:22,0:22:66.23:0,66,1696	0/0:18,0:18:54.19:0,54,1443	0/0:21,0:21:63.19:0,63,1616
chr10	29254553	.	AG	A	389.04	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=7.473;DP=629;FS=0.882;HRun=7;HaplotypeScore=133.5671;InbreedingCoeff=0.9332;MQ=71.56;MQ0=3;MQRankSum=-5.038;QD=16.91;ReadPosRankSum=0.732;VQSLOD=2.3490;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,105,1305	0/0:5,0:5:15.05:0,15,188	0/0:37,0:29:60.28:0,60,673	0/0:35,0:29:41.24:0,41,564	0/0:20,0:20:51.16:0,51,641	0/0:13,0:13:33.11:0,33,415	0/0:25,0:25:75.23:0,75,930	0/0:23,0:23:51.09:0,51,595	1/1:0,12:12:36.08:365,36,0	0/0:20,0:20:42.13:0,42,520	0/0:22,0:22:66.21:0,66,824	0/0:26,0:26:72.20:0,72,866	0/0:17,0:17:45.14:0,45,562	0/0:26,0:26:78.22:0,78,946	0/0:25,0:25:75.22:0,75,919	0/0:24,0:24:69.21:0,69,852	1/1:1,7:7:9.02:92,9,0	1/1:1,2:3:6.01:61,6,0	0/0:23,0:23:60.18:0,60,744	0/0:19,0:19:53.69:0,54,665	0/0:55,0:53:99:0,114,1405	0/0:21,0:21:63.20:0,63,789	0/0:17,0:17:48.15:0,48,598	0/0:31,0:30:81.22:0,81,1001	0/0:21,0:21:60.18:0,60,742	0/0:21,0:21:57.18:0,57,716	0/0:20,0:20:60.19:0,60,755	0/0:21,0:21:60.19:0,60,755
chr10	29255426	.	CAAA	C	13828.22	PASS	AB=0.550;AC=44;AF=0.786;AN=56;BaseQRankSum=-8.409;DP=697;FS=2.868;HRun=13;HaplotypeScore=158.2860;InbreedingCoeff=0.7555;MQ=67.02;MQ0=0;MQRankSum=-2.030;QD=23.32;ReadPosRankSum=5.707;VQSLOD=2.3076;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:12,4:45:85.76:105,0,86	1/1:2,7:9:21.04:255,21,0	0/0:16,0:15:6.15:0,6,272	0/0:17,0:19:30.95:0,31,319	1/1:6,24:31:59.80:672,60,0	1/1:3,16:20:45:511,45,0	1/1:3,19:22:51.05:601,51,0	1/1:4,20:26:56.73:660,57,0	0/0:29,0:29:69.16:0,69,423	1/1:11,25:36:75.02:880,75,0	1/1:5,21:27:50.87:577,51,0	1/1:4,27:32:58.13:871,58,0	1/1:3,25:28:62.23:828,62,0	1/1:6,24:31:53.96:700,54,0	1/1:8,26:35:67.49:836,67,0	1/1:4,20:24:60.11:726,60,0	0/0:22,0:23:10.22:0,10,141	0/0:15,0:15:38.30:0,38,278	1/1:5,14:20:28.83:493,29,0	1/1:6,23:30:59.93:711,60,0	1/1:2,12:15:28.37:361,28,0	1/1:6,18:27:57.66:648,58,0	0/1:1,10:11:13.92:298,0,14	1/1:9,23:33:59.93:690,60,0	1/1:4,26:31:57.01:674,57,0	1/1:2,19:21:50.90:567,51,0	1/1:5,27:32:75.19:911,75,0	1/1:0,7:7:21.06:255,21,0
chr10	29255437	.	AAAG	A	4708.44	PASS	AB=0.991;AC=30;AF=0.536;AN=56;BaseQRankSum=13.374;DP=700;FS=79.438;HRun=0;HaplotypeScore=177.6813;InbreedingCoeff=-0.5113;MQ=64.06;MQ0=0;MQRankSum=-6.726;QD=7.52;ReadPosRankSum=14.446;VQSLOD=-0.1373;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:28.26:0,28,427	0/1:10,0:10:40.62:83,0,41	0/0:14,0:11:5.70:0,6,248	0/0:18,0:18:44.62:0,45,538	0/1:30,0:30:99:177,0,101	0/1:21,0:21:43.82:124,0,44	0/1:23,0:23:42.07:188,0,42	0/1:34,0:34:99:139,0,253	1/1:31,0:31:34.31:136,34,0	0/1:29,1:30:56.86:244,0,57	0/1:24,1:25:26.32:207,0,26	0/1:37,0:37:99:354,0,118	0/1:29,0:29:21.61:370,0,22	0/1:31,0:31:76.47:223,0,76	0/1:34,0:34:79.40:273,0,79	0/1:25,1:26:60.17:270,0,60	0/1:23,2:25:7.24:89,0,7	1/1:17,0:17:1.51:104,2,0	0/1:20,0:20:79.37:121,0,79	0/1:26,0:26:39.81:208,0,40	1/1:15,0:15:0.43:109,0,0	0/1:26,0:26:36.62:177,0,37	0/1:14,0:14:59:102,0,59	1/1:28,0:28:9.84:220,10,0	0/1:31,0:30:34.03:210,0,34	0/1:22,0:22:37.72:154,0,38	1/1:32,0:32:9.07:341,9,0	0/1:9,0:9:15.57:85,0,16
chr10	29255438	.	AAG	A	1324.05	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=-2.005;DP=694;FS=45.615;HRun=0;HaplotypeScore=178.4763;InbreedingCoeff=0.7999;MQ=64.48;MQ0=0;MQRankSum=0.302;QD=12.49;ReadPosRankSum=1.038;VQSLOD=1.8168;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:41,0:41:99:111,0,164	0/0:10,0:10:21.38:0,21,114	0/0:13,0:10:7.51:0,8,178	0/0:19,0:19:44.07:0,44,421	0/0:30,0:30:70.66:0,71,387	0/0:21,0:21:50.61:0,51,250	0/0:23,0:23:50.59:0,51,248	0/0:35,0:35:78.77:0,79,549	1/1:7,19:26:53.70:663,54,0	0/0:30,0:30:48.65:0,49,390	0/0:25,0:25:29.69:0,30,196	0/0:38,0:38:55.86:0,56,348	0/0:29,0:29:19.41:0,19,193	0/0:31,0:31:60.02:0,60,286	0/0:34,0:34:54.04:0,54,318	0/0:26,0:26:39.27:0,39,249	1/1:8,16:24:28.92:306,29,0	1/1:8,7:15:35.73:393,36,0	0/0:21,0:21:52.63:0,53,272	0/0:26,0:26:58.15:0,58,279	0/0:15,0:15:10.40:0,10,96	0/0:25,0:25:44.68:0,45,252	0/0:14,0:14:28.74:0,29,142	0/0:28,0:28:34.66:0,35,208	0/0:31,0:30:44.51:0,45,247	0/0:22,0:22:33.71:0,34,250	0/0:33,0:33:52.44:0,52,239	0/0:9,0:9:21.71:0,22,92
chr10	29255439	.	AG	A	635.20	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=1.750;DP=695;FS=27.852;HRun=1;HaplotypeScore=169.3757;InbreedingCoeff=0.9757;MQ=64.54;MQ0=0;MQRankSum=-3.018;QD=9.93;ReadPosRankSum=-1.127;VQSLOD=-0.3514;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:79.94:0,80,560	0/0:10,0:10:28.02:0,28,160	0/0:11,0:8:8.69:0,9,112	0/0:20,0:20:43.49:0,43,418	0/0:30,0:30:79.82:0,80,490	0/0:21,0:21:55.36:0,55,337	0/0:23,0:23:59.70:0,60,346	0/0:35,0:35:99:0,99,688	1/1:19,6:25:52.99:343,53,0	0/0:30,0:30:65.82:0,66,525	0/0:26,0:26:47.76:0,48,319	0/0:38,0:38:85.18:0,85,493	0/0:30,0:30:56.69:0,57,332	0/0:31,0:31:71.72:0,72,396	0/0:34,0:34:81.97:0,82,475	0/0:26,0:26:58.99:0,59,362	1/1:21,3:24:21.02:151,21,0	1/1:14,1:15:39.40:283,39,0	0/0:21,0:21:57.32:0,57,340	0/0:26,0:26:69.40:0,69,396	0/0:15,0:15:32.31:0,32,176	0/0:25,0:25:62.89:0,63,385	0/0:14,0:14:34.04:0,34,195	0/0:28,0:28:47.54:0,48,325	0/0:31,0:30:58.72:0,59,358	0/0:22,0:22:45.06:0,45,318	0/0:34,0:34:75.56:0,76,410	0/0:9,0:9:25.57:0,26,134
chr10	29256020	.	C	CA	1601.07	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=7.861;DP=747;FS=1.294;HRun=1;HaplotypeScore=133.8689;InbreedingCoeff=0.9981;MQ=89.94;MQ0=2;MQRankSum=-3.325;QD=30.21;ReadPosRankSum=1.967;VQSLOD=3.5281;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,144,1853	0/0:9,0:9:27.09:0,27,349	0/0:29,0:29:81.22:0,81,985	0/0:32,0:32:74.21:0,74,898	0/0:23,0:23:66.16:0,66,836	0/0:14,0:14:42.12:0,42,531	0/0:35,0:35:99:0,102,1324	0/0:28,0:28:81.24:0,81,1015	1/1:5,21:26:60.08:845,60,0	0/0:31,0:31:87.26:0,87,1086	0/0:27,0:27:69.21:0,69,880	0/0:29,0:29:84.27:0,84,1083	0/0:29,0:29:78.16:0,78,958	0/0:32,0:32:93.29:0,93,1189	0/0:31,0:31:87.24:0,87,1110	0/0:26,0:26:75.24:0,75,973	1/1:0,17:17:39.13:584,39,0	1/1:0,10:10:21.07:315,21,0	0/0:26,0:26:78.25:0,78,1001	0/0:19,0:19:57.15:0,57,709	0/0:40,0:40:99:0,114,1449	0/0:31,0:31:90.29:0,90,1168	0/0:25,0:23:63.20:0,63,817	0/0:31,0:31:90.28:0,90,1153	0/0:24,0:24:72.18:0,72,912	0/0:27,0:26:78.25:0,78,1009	0/0:28,0:28:81.25:0,81,1037	0/0:17,0:17:48.15:0,48,617
chr10	29256207	.	GTGTA	G	2905.49	PASS	AB=0.981;AC=35;AF=0.673;AN=52;BaseQRankSum=-4.289;DP=451;FS=2.515;HRun=0;HaplotypeScore=99.7769;InbreedingCoeff=0.3129;MQ=43.06;MQ0=30;MQRankSum=0.759;QD=8.37;ReadPosRankSum=1.925;VQSLOD=2.6609;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:25:26.88:0,27,214	1/1:6,0:6:11.74:93,12,0	./.	./.	1/1:13,0:12:14.94:176,15,0	0/0:17,0:14:2.99:0,3,24	0/1:16,1:15:9.73:60,0,10	0/1:17,0:17:6.19:212,0,6	0/0:24,0:23:12.74:0,13,153	1/1:20,0:20:39.47:396,39,0	0/1:21,0:20:0:0,0,0	1/1:12,0:10:20.65:244,21,0	1/1:20,0:18:5.90:252,6,0	1/1:20,1:19:7.12:190,7,0	0/0:3,10:13:2.91:0,3,21	0/1:16,0:15:19.97:147,0,20	0/0:17,0:14:10.21:0,10,56	0/1:21,0:16:13.59:14,0,138	1/1:10,0:9:20.25:282,20,0	1/1:16,0:16:2.94:53,3,0	1/1:19,0:11:2.84:21,3,0	1/1:21,0:21:21.07:395,21,0	1/1:17,0:17:1.69:211,2,0	0/1:23,0:22:3.15:99,0,3	0/1:21,2:22:0.32:0,0,0	1/1:16,0:15:6.71:121,7,0	1/1:2,11:13:4.59:58,5,0	1/1:5,0:3:5.81:34,6,0
chr10	29256209	.	GTA	G	4073.79	PASS	AB=0.801;AC=43;AF=0.860;AN=50;BaseQRankSum=-2.928;DP=429;FS=9.406;HRun=0;HaplotypeScore=90.0893;InbreedingCoeff=0.2603;MQ=43.09;MQ0=30;MQRankSum=1.305;QD=10.16;ReadPosRankSum=1.569;VQSLOD=2.8271;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:23:0.88:4,1,0	1/1:6,0:6:11.91:184,12,0	./.	./.	1/1:13,0:12:15.05:221,15,0	./.	0/1:15,2:15:8.68:125,0,9	1/1:15,0:15:27.01:262,27,0	1/1:24,0:23:5.44:18,5,0	1/1:1,18:19:41.35:480,41,0	0/1:4,16:19:0:0,0,0	1/1:12,0:10:20.68:297,21,0	1/1:20,0:18:28.18:323,28,0	1/1:21,0:19:26.63:333,27,0	0/0:12,0:12:0.47:0,0,1	1/1:16,0:15:22.31:300,22,0	0/1:17,0:14:1.30:1,0,3	0/1:20,0:15:9.71:34,0,10	1/1:2,6:7:21.01:220,21,0	1/1:0,16:16:2.87:36,3,0	1/1:16,0:8:2.87:44,3,0	1/1:21,0:20:21.07:282,21,0	1/1:15,1:16:24.08:333,24,0	1/1:22,0:21:18.93:250,19,0	0/1:4,17:20:0.13:0,0,0	1/1:2,12:14:23.37:211,23,0	1/1:14,0:13:4.64:44,5,0	1/1:5,0:3:6.02:72,6,0
chr10	29256210	.	TAA	T	2875.68	PASS	AB=0.970;AC=45;AF=0.900;AN=50;BaseQRankSum=-2.246;DP=430;FS=2.791;HRun=2;HaplotypeScore=93.3259;InbreedingCoeff=0.3025;MQ=42.93;MQ0=30;MQRankSum=1.280;QD=7.15;ReadPosRankSum=0.856;VQSLOD=0.5311;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:27,1:23:26.85:218,27,0	1/1:5,1:6:11.70:86,12,0	./.	./.	1/1:14,1:14:14.90:109,15,0	./.	0/1:17,0:15:7.87:52,0,8	1/1:15,0:15:38.50:254,39,0	1/1:23,1:23:23.71:186,24,0	1/1:18,1:19:40.63:290,41,0	0/1:18,2:19:0:0,0,0	1/1:11,1:10:20.74:141,21,0	1/1:21,0:19:31.62:212,32,0	1/1:20,0:18:23.39:157,23,0	0/0:10,2:12:0.47:0,0,1	1/1:16,0:15:26.70:187,27,0	1/1:15,0:12:4.04:61,4,0	1/1:19,0:14:20.81:148,21,0	1/1:8,0:7:20.62:133,21,0	1/1:17,0:17:2.71:17,3,0	1/1:17,0:9:2.59:22,3,0	1/1:21,0:20:20.55:127,21,0	1/1:16,0:16:23.76:170,24,0	1/1:20,1:20:17.73:132,18,0	0/1:22,0:21:0.13:0,0,0	1/1:12,2:14:23.44:181,23,0	1/1:12,2:13:5.47:36,5,0	1/1:5,0:3:5.93:40,6,0
chr10	29256255	.	GAGAGAGAGAGAGAA	G	5100.38	PASS	AB=1.000;AC=50;AF=0.893;AN=56;BaseQRankSum=4.153;DP=479;FS=5.709;HRun=0;HaplotypeScore=149.7936;InbreedingCoeff=0.4355;MQ=44.46;MQ0=33;MQRankSum=3.010;QD=11.36;ReadPosRankSum=2.037;VQSLOD=3.4084;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:31,0:25:35.70:284,36,0	1/1:7,1:7:14.43:117,14,0	0/0:16,0:11:26.23:0,26,323	0/0:14,0:6:11.09:0,11,136	1/1:14,1:14:20.96:170,21,0	1/1:18,0:16:23.92:193,24,0	1/1:14,0:12:1.69:109,2,0	1/1:25,0:24:37.31:467,37,0	1/1:4,0:4:5.99:50,6,0	1/1:21,0:21:35.73:439,36,0	1/1:12,2:13:10.53:79,11,0	1/1:12,0:9:5.94:49,6,0	0/1:20,0:18:8.98:105,0,9	1/1:19,0:18:25.13:216,25,0	1/1:30,0:30:50.81:416,51,0	1/1:16,0:15:14.65:124,15,0	1/1:12,0:8:2.99:24,3,0	0/1:13,0:9:34.70:117,0,35	1/1:5,0:5:11.22:86,11,0	1/1:20,0:20:22.39:192,22,0	1/1:21,0:18:23.49:189,23,0	1/1:20,0:19:17.70:149,18,0	1/1:19,0:19:20.96:172,21,0	1/1:24,0:22:23.86:186,24,0	1/1:21,0:20:35.96:300,36,0	1/1:19,0:19:9.33:417,9,0	1/1:15,0:14:34.71:366,35,0	1/1:13,0:10:6.03:87,6,0
chr10	29256259	.	GAGAGAGAGAA	G	5709.13	PASS	AB=1.000;AC=51;AF=0.911;AN=56;BaseQRankSum=3.857;DP=471;FS=0.000;HRun=0;HaplotypeScore=132.5573;InbreedingCoeff=0.6949;MQ=49.95;MQ0=29;MQRankSum=1.351;QD=13.09;ReadPosRankSum=1.964;VQSLOD=3.6185;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:24:35.38:284,35,0	1/1:7,0:6:14.93:118,15,0	0/0:18,0:12:22.40:0,22,317	0/0:17,0:9:9.94:0,10,141	1/1:12,0:11:23.95:194,24,0	1/1:17,0:16:26.91:218,27,0	1/1:12,0:10:16.99:143,17,0	1/1:27,0:26:66.06:572,66,0	1/1:4,0:4:5.99:50,6,0	1/1:19,0:19:45.80:472,46,0	1/1:12,0:11:14.98:125,15,0	1/1:13,1:11:14.93:125,15,0	1/1:21,0:20:19.54:173,20,0	1/1:19,0:18:25.90:218,26,0	1/1:27,1:28:50.74:416,51,0	1/1:13,0:12:14.91:124,15,0	1/1:12,0:8:3.46:25,3,0	0/1:14,0:10:0.28:117,0,0	1/1:6,0:6:14.55:113,15,0	1/1:18,0:18:22.08:191,22,0	1/1:22,0:20:26.50:200,26,0	1/1:19,0:18:20.97:174,21,0	1/1:19,0:19:26.18:204,26,0	1/1:22,0:21:23.86:186,24,0	1/1:20,0:20:38.96:325,39,0	1/1:20,1:21:35.58:465,36,0	1/1:15,1:15:41.38:387,41,0	1/1:12,0:9:9.11:93,9,0
chr10	29256542	.	C	CCTG	3929.05	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.240;DP=660;FS=4.841;HRun=0;HaplotypeScore=98.5065;InbreedingCoeff=0.9977;MQ=87.19;MQ0=0;MQRankSum=-2.387;QD=60.45;ReadPosRankSum=3.106;VQSLOD=5.6061;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,99,1660	0/0:8,0:8:24.08:0,24,409	0/0:24,0:24:69.22:0,69,1116	0/0:37,0:37:99:0,102,1655	0/0:15,0:15:36.08:0,36,583	0/0:24,0:24:69.24:0,69,1177	0/0:17,0:17:45.15:0,45,768	0/0:20,0:20:57.18:0,57,921	1/1:2,16:18:54.18:1166,54,0	0/0:32,0:32:96.32:0,96,1602	0/0:19,0:19:51.15:0,51,837	0/0:25,0:25:69.22:0,69,1133	0/0:22,0:22:66.22:0,66,1097	0/0:28,0:28:81.27:0,81,1347	0/0:33,0:33:90.29:0,90,1509	0/0:23,0:23:63.22:0,63,1075	1/1:3,24:27:75.26:1662,75,0	1/1:3,17:20:48.16:1101,48,0	0/0:17,0:17:51.17:0,51,866	0/0:24,0:24:69.24:0,69,1176	0/0:27,0:27:81.28:0,81,1381	0/0:23,0:23:57.14:0,57,912	0/0:14,0:14:39.12:0,39,632	0/0:28,0:28:78.25:0,78,1290	0/0:29,0:28:75.25:0,75,1249	0/0:35,0:35:99:0,99,1609	0/0:30,0:30:90.31:0,90,1530	0/0:7,0:7:21.07:0,21,358
chr10	29256744	.	C	CT	676.45	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-4.878;DP=482;FS=2.408;HRun=10;HaplotypeScore=50.0249;InbreedingCoeff=0.9679;MQ=77.82;MQ0=0;MQRankSum=-3.709;QD=16.11;ReadPosRankSum=-0.601;VQSLOD=3.6002;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:56.66:0,57,453	0/0:5,0:5:14.98:0,15,123	0/0:14,0:16:24.98:0,25,184	0/0:10,0:11:19.13:0,19,115	0/0:19,0:19:32.18:0,32,397	0/0:19,0:20:52.95:0,53,425	0/0:15,0:15:44.95:0,45,369	0/0:24,0:24:53.87:0,54,440	1/1:3,9:12:21.01:212,21,0	0/0:16,0:16:41.93:0,42,345	0/0:22,0:24:58:0,58,455	0/0:11,0:11:26.96:0,27,222	0/0:21,0:21:19.20:0,19,359	0/0:18,0:18:35.93:0,36,296	0/0:12,0:13:35:0,35,277	0/0:18,0:18:46.98:0,47,375	1/1:4,14:18:11.45:327,11,0	1/1:3,9:12:27.03:275,27,0	0/0:18,0:20:52.01:0,52,406	0/0:22,0:23:52.93:0,53,423	0/0:9,0:9:14.97:0,15,123	0/0:15,0:15:32.95:0,33,271	0/0:22,0:22:25.08:0,25,368	0/0:22,0:22:53.91:0,54,443	0/0:15,0:15:35.95:0,36,296	0/0:18,0:18:44.90:0,45,365	0/0:26,0:26:62.86:0,63,513	0/0:16,0:16:47.95:0,48,394
chr10	29257395	.	TC	T	17453.77	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=7.321;DP=702;FS=3.559;HRun=5;HaplotypeScore=74.6309;InbreedingCoeff=0.9999;MQ=89.37;MQ0=0;MQRankSum=-9.064;QD=29.33;ReadPosRankSum=4.818;VQSLOD=5.3164;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,38:40:90.26:1020,90,0	1/1:2,14:16:36.10:407,36,0	0/0:33,0:33:96.28:0,96,1246	0/0:25,0:25:46.83:0,47,768	1/1:0,21:21:57.16:646,57,0	1/1:2,25:27:78.19:869,78,0	1/1:3,26:29:57.16:646,57,0	1/1:4,38:42:99:1250,111,0	0/0:16,0:16:48.13:0,48,637	1/1:0,20:20:60.17:680,60,0	1/1:1,25:26:69.20:781,69,0	1/1:0,29:29:72.21:817,72,0	1/1:1,30:31:78.22:883,78,0	1/1:2,29:31:84.24:952,84,0	1/1:1,25:26:72.20:815,72,0	1/1:2,23:25:63.18:715,63,0	0/0:18,0:18:51.17:0,51,695	0/0:15,0:15:42.14:0,42,571	1/1:2,18:20:54.07:594,54,0	1/1:2,20:22:51.14:577,51,0	1/1:3,29:32:78.22:885,78,0	1/1:1,20:21:57.16:644,57,0	1/1:1,18:19:51:578,51,0	1/1:0,17:17:48.14:544,48,0	1/1:4,20:24:63.18:713,63,0	1/1:3,34:37:99:1147,102,0	1/1:1,23:24:69.20:781,69,0	1/1:1,15:16:45.13:510,45,0
chr10	29257610	.	C	CACAGAGAG	5084.56	PASS	AB=1.000;AC=21;AF=0.389;AN=54;BaseQRankSum=9.458;DP=646;FS=0.380;HRun=0;HaplotypeScore=356.8636;InbreedingCoeff=-0.0506;MQ=60.79;MQ0=0;MQRankSum=-5.422;QD=13.21;ReadPosRankSum=2.145;VQSLOD=2.6943;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:17,0:17:17.03:17,0,89	0/0:6,0:6:14.75:0,15,92	0/0:37,0:30:40.86:0,41,857	0/0:40,0:27:17.88:0,18,578	0/0:31,0:31:6.76:0,7,229	0/1:33,0:33:99:250,0,168	0/1:16,0:16:27.11:27,0,89	0/1:30,0:28:99:270,0,183	1/1:15,5:22:23.96:288,24,0	0/1:27,0:27:76.30:600,0,76	0/0:27,0:26:39.09:0,39,262	0/1:27,0:26:99:273,0,149	0/1:28,0:28:94.89:489,0,95	0/1:24,0:23:22.81:23,0,119	0/1:26,0:26:77.11:77,0,156	0/1:29,0:29:99:203,0,175	1/1:12,5:17:30.43:683,30,0	1/1:6,2:8:17.98:271,18,0	0/1:16,0:16:84.98:282,0,85	0/0:26,0:26:44.26:0,44,294	./.	0/0:30,0:30:49.76:0,50,300	0/0:23,0:23:18.01:0,18,208	0/0:11,0:11:11.81:0,12,76	0/0:21,0:21:32.32:0,32,195	0/1:27,0:27:72.06:885,0,72	0/1:35,0:35:99:370,0,120	1/1:3,0:3:6.02:76,6,0
chr10	29257614	.	G	GAGAGAGAGAA	10983.16	PASS	AB=1.000;AC=44;AF=0.786;AN=56;BaseQRankSum=5.965;DP=645;FS=1.191;HRun=0;HaplotypeScore=358.7831;InbreedingCoeff=0.3969;MQ=57.30;MQ0=1;MQRankSum=-8.772;QD=20.15;ReadPosRankSum=3.304;VQSLOD=2.8477;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:17:22.74:213,23,0	0/1:8,0:8:5.64:48,0,6	0/0:41,0:32:50.39:0,50,857	0/0:45,0:27:16.39:0,16,515	1/1:29,0:29:32.07:210,32,0	1/1:33,0:33:56.74:824,57,0	0/1:16,0:16:0.65:113,0,1	1/1:30,0:28:27.32:652,27,0	0/1:22,0:22:10.59:57,0,11	1/1:26,0:26:41.99:1345,42,0	1/1:25,1:25:31.05:238,31,0	1/1:26,0:25:20.35:484,20,0	1/1:28,0:28:54.01:1163,54,0	1/1:21,1:21:17.37:154,17,0	1/1:26,0:26:41.11:410,41,0	1/1:25,1:26:49.67:801,50,0	1/1:16,0:16:1.97:335,2,0	0/1:9,0:9:27.93:80,0,28	0/1:18,0:18:0.82:521,0,1	1/1:25,0:25:48.29:344,48,0	0/1:8,0:8:0:0,0,0	1/1:29,0:29:30.94:186,31,0	1/1:24,0:24:36.60:263,37,0	0/0:12,0:12:0.14:0,0,0	1/1:22,0:22:29.67:174,30,0	1/1:24,1:25:65.95:1584,66,0	1/1:31,0:31:27.41:639,27,0	1/1:3,0:3:6.02:145,6,0
chr10	29257616	.	G	GAGAGAGAA	9424.30	PASS	AB=1.000;AC=43;AF=0.768;AN=56;BaseQRankSum=6.698;DP=647;FS=3.282;HRun=0;HaplotypeScore=353.1529;InbreedingCoeff=0.2959;MQ=54.96;MQ0=1;MQRankSum=-7.308;QD=17.42;ReadPosRankSum=3.809;VQSLOD=3.0600;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:17:22.74:197,23,0	0/1:7,0:7:5.30:48,0,5	0/0:44,0:32:54.86:0,55,812	0/0:49,0:29:37.70:0,38,573	1/1:27,0:27:31.85:209,32,0	1/1:32,0:33:61.20:708,61,0	0/1:14,0:14:2.87:95,0,3	0/1:29,0:27:35.13:478,0,35	0/1:21,0:21:10.48:79,0,10	1/1:27,0:27:41.09:1086,41,0	1/1:26,0:25:31.21:238,31,0	1/1:24,1:24:20.27:401,20,0	1/1:29,0:29:38.99:915,39,0	1/1:20,0:19:17.36:135,17,0	1/1:27,0:27:41.37:359,41,0	1/1:26,0:26:49.67:619,50,0	1/1:16,0:16:2.35:433,2,0	0/1:9,0:9:25.90:108,0,26	0/1:18,0:18:37.64:431,0,38	1/1:30,0:30:48.05:343,48,0	0/1:9,0:9:0:0,0,0	1/1:29,0:29:30.77:186,31,0	1/1:24,0:24:36.60:263,37,0	0/0:12,0:12:0.11:0,0,1	1/1:22,0:22:29.18:174,29,0	1/1:24,0:24:65.94:1303,66,0	1/1:12,16:29:27.46:523,27,0	1/1:3,0:3:5.99:91,6,0
chr10	29257620	.	G	GAGAA	4786.57	PASS	AB=0.984;AC=40;AF=0.714;AN=56;BaseQRankSum=4.280;DP=660;FS=2.112;HRun=0;HaplotypeScore=242.6371;InbreedingCoeff=0.0213;MQ=50.91;MQ0=1;MQRankSum=-6.639;QD=8.55;ReadPosRankSum=3.062;VQSLOD=3.7971;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:18:18.51:124,19,0	0/1:8,0:8:7.78:48,0,8	0/0:44,0:32:29.05:0,29,687	0/0:55,0:32:33.96:0,34,529	1/1:24,2:26:16.51:152,17,0	1/1:33,2:35:47.59:475,48,0	0/1:13,0:13:7.48:48,0,7	0/1:30,0:28:99:140,0,180	0/1:23,0:23:13.62:55,0,14	0/1:30,0:30:69.79:339,0,70	1/1:24,0:23:27.48:230,27,0	0/1:24,1:24:0.54:130,0,1	1/1:24,2:27:9.71:570,10,0	1/1:21,0:20:14.82:98,15,0	1/1:26,2:28:18.91:167,19,0	1/1:22,2:25:35.59:336,36,0	0/1:17,0:17:49.71:110,0,50	0/1:10,0:10:19.62:20,0,40	0/1:20,1:21:99:181,0,109	1/1:30,0:30:44.56:336,45,0	0/1:9,0:9:0:0,0,0	1/1:28,1:29:21.55:151,22,0	1/1:22,0:22:31.64:252,32,0	1/1:12,0:12:2.46:17,2,0	1/1:20,1:21:23.64:159,24,0	0/1:23,3:26:22.64:497,0,23	0/1:27,0:27:4.62:70,0,5	1/1:1,2:3:3.90:82,4,0
chr10	29257622	.	G	GAA	3671.52	PASS	AB=0.974;AC=36;AF=0.643;AN=56;BaseQRankSum=1.866;DP=652;FS=1.923;HRun=1;HaplotypeScore=230.9746;InbreedingCoeff=0.0969;MQ=51.94;MQ0=2;MQRankSum=-2.703;QD=6.81;ReadPosRankSum=-0.953;VQSLOD=-0.4234;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:18:18.52:128,19,0	0/1:6,1:7:3.18:49,0,3	0/0:48,0:34:23.25:0,23,673	0/0:57,0:33:52.69:0,53,525	1/1:24,2:26:16.93:152,17,0	1/1:34,1:35:40.11:400,40,0	1/1:12,1:13:0.17:50,0,0	0/1:29,0:27:99:137,0,185	0/1:22,0:22:10.67:11,0,31	0/1:27,1:30:99:222,0,216	1/1:22,0:21:28.95:232,29,0	0/1:23,0:22:16.77:109,0,17	0/1:24,3:27:2.52:402,0,3	0/1:20,1:20:3.46:66,0,3	1/1:24,2:26:21.63:169,22,0	1/1:25,0:25:16.97:250,17,0	0/1:17,0:17:0.27:0,0,83	0/0:8,0:8:12.03:0,12,64	0/1:22,0:21:99:105,0,159	1/1:30,0:30:43.69:334,44,0	0/1:9,0:9:0:0,0,0	1/1:26,1:27:22.73:152,23,0	1/1:22,0:22:32.07:228,32,0	0/1:11,0:11:0:0,0,0	1/1:21,1:22:23.64:159,24,0	0/1:26,0:26:99:234,0,126	0/1:26,0:26:21.55:53,0,22	0/1:3,0:3:7.94:30,0,8
chr10	29257644	.	GACAC	G	4207.85	PASS	AB=0.767;AC=26;AF=0.481;AN=54;BaseQRankSum=0.405;DP=651;FS=9.924;HRun=0;HaplotypeScore=260.3163;InbreedingCoeff=0.4006;MQ=43.51;MQ0=16;MQRankSum=-3.274;QD=12.20;ReadPosRankSum=3.368;VQSLOD=1.7435;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:17:2.57:11,3,0	1/1:1,5:6:5.97:100,6,0	0/0:45,0:26:53.80:0,54,1064	0/0:56,0:26:42.05:0,42,828	0/0:19,7:27:1.91:0,2,6	0/1:27,7:34:31.35:56,0,31	1/1:10,6:16:11.88:143,12,0	1/1:19,19:30:62.16:890,62,0	0/0:22,0:26:16.26:0,16,142	1/1:17,9:25:52.92:743,53,0	0/0:14,4:16:0:0,0,0	0/1:15,6:22:8.95:76,0,9	1/1:16,9:25:14.16:346,14,0	0/1:14,7:20:12.35:42,0,12	0/0:20,7:27:3.70:0,4,32	0/1:20,5:26:31.67:101,0,32	0/0:20,0:20:25.75:0,26,372	0/0:6,0:7:9.02:0,9,105	1/1:17,6:21:47.80:605,48,0	0/1:10,14:24:8.35:85,0,8	./.	0/0:20,6:26:2.94:0,3,18	0/0:13,7:20:1.82:0,2,5	0/1:9,4:13:0:0,0,0	0/0:15,6:21:3.41:0,3,19	1/1:20,6:26:34.49:716,34,0	1/1:20,1:21:6.95:230,7,0	1/1:4,0:4:8.45:64,8,0
chr10	29257648	.	C	CAG	3901.28	PASS	AB=0.831;AC=40;AF=0.741;AN=54;BaseQRankSum=6.793;DP=620;FS=6.116;HRun=0;HaplotypeScore=244.6692;InbreedingCoeff=0.4325;MQ=43.20;MQ0=18;MQRankSum=-3.236;QD=8.04;ReadPosRankSum=-0.235;VQSLOD=2.7647;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,3:12:2.74:12,3,0	1/1:7,0:7:8.87:86,9,0	0/0:40,0:23:57.99:0,58,771	0/0:55,0:26:25.88:0,26,604	1/1:14,9:23:1.80:6,2,0	1/1:18,9:27:12.15:93,12,0	1/1:14,3:17:14.84:139,15,0	0/1:35,3:31:8.55:551,0,9	0/1:25,0:25:13.59:14,0,113	1/1:19,7:25:28.84:689,29,0	1/1:9,8:15:4.02:12,4,0	0/1:14,6:20:2.87:50,0,3	1/1:17,5:22:37.60:344,38,0	1/1:12,7:19:6.86:26,7,0	1/1:15,10:25:4.07:12,4,0	1/1:15,11:26:18.36:165,18,0	0/0:19,0:19:23.96:0,24,327	0/0:9,0:9:11:0,11,116	0/1:16,8:20:3.76:410,0,4	1/1:19,5:24:12.62:96,13,0	./.	1/1:14,9:24:3.84:11,4,0	0/1:14,5:18:0.40:0,0,9	0/1:8,4:12:0:1,0,0	1/1:17,5:22:4.22:12,4,0	1/1:17,10:26:40.96:805,41,0	1/1:14,7:21:9.57:271,10,0	1/1:4,1:5:8.85:97,9,0
chr10	29257654	.	CACAG	C	1803.50	PASS	AB=0.987;AC=16;AF=0.296;AN=54;BaseQRankSum=0.020;DP=629;FS=10.852;HRun=0;HaplotypeScore=266.7139;InbreedingCoeff=-0.1129;MQ=39.64;MQ0=20;MQRankSum=-3.709;QD=5.74;ReadPosRankSum=7.690;VQSLOD=0.5223;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:12:2.22:0,2,7	1/1:7,0:7:1.05:61,1,0	0/0:35,0:21:41.96:0,42,809	0/0:47,0:24:38.69:0,39,690	0/0:25,0:25:10.74:0,11,60	0/1:27,1:28:16.38:16,0,77	0/1:16,0:16:6.30:73,0,6	0/1:39,0:30:68.21:402,0,68	0/0:27,0:27:25.80:0,26,175	0/1:27,0:26:16.72:336,0,17	0/0:17,1:16:8.83:0,9,54	0/1:19,1:20:28.64:42,0,29	0/1:23,0:23:38.66:155,0,39	0/1:19,0:19:18.85:19,0,33	0/0:28,0:28:12.38:0,12,75	0/1:28,0:28:33.73:34,0,115	0/0:19,0:19:36.61:0,37,334	0/0:9,0:9:17.79:0,18,150	1/1:21,0:17:33.25:293,33,0	0/1:28,1:29:29.30:29,0,109	./.	0/0:24,1:25:10.38:0,10,58	0/0:19,1:18:0.72:0,1,3	0/0:12,0:12:0.47:0,0,1	0/0:19,2:21:9.16:0,9,44	0/1:28,0:27:11.73:373,0,12	0/1:23,1:24:35.38:111,0,35	0/1:5,0:5:11.26:11,0,16
chr10	29257656	.	CAG	C	1240	PASS	AB=0.994;AC=15;AF=0.278;AN=54;BaseQRankSum=1.602;DP=638;FS=7.819;HRun=0;HaplotypeScore=265.8677;InbreedingCoeff=-0.2204;MQ=38.20;MQ0=20;MQRankSum=-0.179;QD=3.79;ReadPosRankSum=5.767;VQSLOD=1.2819;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:5,11:13:1.50:0,1,4	1/1:7,0:7:1.46:69,1,0	0/0:31,0:16:42.08:0,42,580	0/0:46,0:23:33.05:0,33,448	0/0:26,0:26:11.15:0,11,48	0/1:28,0:28:28.32:28,0,50	0/1:16,0:16:11.17:13,0,11	0/1:41,0:32:58.03:58,0,180	0/0:26,0:26:4.45:0,4,108	0/1:28,0:27:99:215,0,136	0/0:20,0:18:13.72:0,14,60	0/1:19,1:20:6.72:49,0,7	0/1:23,0:23:21.46:201,0,21	0/1:19,0:19:21.35:32,0,21	0/0:28,1:29:15.02:0,15,73	0/1:28,0:28:55.50:56,0,68	0/0:19,0:19:0.62:0,1,139	0/0:11,0:11:15.12:0,15,95	0/1:21,0:17:9.88:288,0,10	0/1:29,0:29:53.35:53,0,71	./.	0/0:27,0:27:12.80:0,13,53	0/0:21,0:19:5.49:0,5,24	0/1:14,0:14:0:0,0,0	0/0:22,0:22:11.29:0,11,43	0/1:27,1:28:68.71:270,0,69	0/1:24,0:24:42.62:49,0,43	0/0:5,0:5:2.73:0,3,43
chr10	29257674	.	G	GAC	4704.01	PASS	AB=0.833;AC=44;AF=0.815;AN=54;BaseQRankSum=2.355;DP=633;FS=14.945;HRun=0;HaplotypeScore=252.4025;InbreedingCoeff=0.6642;MQ=33.41;MQ0=22;MQRankSum=-4.733;QD=8.98;ReadPosRankSum=-1.194;VQSLOD=2.9020;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:13:5.42:23,5,0	1/1:4,6:10:8.97:124,9,0	0/1:17,0:7:3.43:3,0,21	0/0:34,0:20:21.33:0,21,198	1/1:14,13:27:8.69:51,9,0	1/1:18,10:28:9.58:64,10,0	1/1:13,6:19:4.64:68,5,0	1/1:42,2:35:60.15:759,60,0	0/0:28,0:28:13.41:0,13,218	1/1:20,10:30:56.91:798,57,0	1/1:9,10:18:10.13:30,10,0	1/1:14,8:21:11:112,11,0	1/1:11,13:24:34.95:388,35,0	1/1:9,11:19:10.04:102,10,0	1/1:16,12:28:11.06:73,11,0	1/1:16,15:30:28.13:271,28,0	0/0:21,0:21:20.50:0,21,270	0/0:11,0:11:14.49:0,14,195	1/1:7,10:13:36.08:518,36,0	1/1:13,23:36:25.10:203,25,0	./.	1/1:11,12:23:10.91:47,11,0	1/1:12,12:22:6.82:67,7,0	0/1:7,7:14:0.01:1,0,0	1/1:13,12:25:2.81:28,3,0	1/1:19,8:25:52.39:679,52,0	1/1:9,7:16:19.07:202,19,0	1/1:4,2:6:3.78:91,4,0
chr10	29257686	.	GAC	G	548.69	PASS	AB=0.900;AC=10;AF=0.179;AN=56;BaseQRankSum=-2.060;DP=644;FS=1.742;HRun=0;HaplotypeScore=246.4596;InbreedingCoeff=0.5133;MQ=43.97;MQ0=19;MQRankSum=2.137;QD=3.92;ReadPosRankSum=2.274;VQSLOD=2.8977;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:16:4.25:39,4,0	0/0:3,0:14:20.01:0,20,91	0/1:21,0:10:26.21:26,0,225	0/0:37,0:23:28.16:0,28,630	0/0:4,0:24:30.06:0,30,142	0/0:8,0:30:20.93:0,21,89	0/0:7,0:19:11.70:0,12,59	0/0:43,0:35:31.51:0,32,198	1/1:9,20:29:19.58:255,20,0	0/0:12,0:27:48.20:0,48,425	0/0:6,0:24:27.98:0,28,102	0/0:10,0:20:6.80:0,7,36	0/0:8,0:25:32.09:0,32,247	0/0:9,0:19:13.49:0,13,73	0/0:13,0:30:20.83:0,21,107	0/0:6,0:29:34.12:0,34,214	1/1:8,12:21:23.41:268,23,0	0/1:4,8:12:7.59:96,0,8	0/0:14,0:14:29.71:0,30,216	0/0:5,0:33:36.28:0,36,192	0/0:2,0:12:2.04:0,2,6	0/0:13,0:27:17.83:0,18,85	0/1:14,0:22:11.20:11,0,99	0/1:10,0:14:0:0,0,0	0/0:5,0:20:22.16:0,22,111	0/0:22,0:29:38.63:0,39,320	0/0:5,0:12:24.75:0,25,162	0/0:3,0:5:6:0,6,51
chr10	29258533	.	CT	C	20928.74	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=15.047;DP=662;FS=1.237;HRun=3;HaplotypeScore=178.3126;InbreedingCoeff=0.9995;MQ=79.38;MQ0=0;MQRankSum=-9.021;QD=37.98;ReadPosRankSum=3.833;VQSLOD=3.7782;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,33:35:99:1320,102,0	1/1:1,12:13:39.13:529,39,0	0/0:24,0:24:72.25:0,72,1149	0/0:20,0:20:55.40:0,55,803	1/1:4,39:43:99:1566,123,0	1/1:1,24:25:75.24:975,75,0	1/1:3,27:30:84.26:1043,84,0	1/1:2,25:27:81.24:1039,81,0	0/0:25,0:25:75.26:0,75,1191	1/1:0,25:25:75.25:1012,75,0	1/1:1,18:19:57.15:712,57,0	1/1:1,24:25:75.24:1000,75,0	1/1:1,28:29:84.27:1110,84,0	1/1:1,16:17:51.17:691,51,0	1/1:0,29:29:87.28:1153,87,0	1/1:1,19:20:60.20:809,60,0	0/0:27,0:27:81.28:0,81,1285	0/0:15,0:15:45.14:0,45,695	1/1:1,18:19:47.95:619,48,0	1/1:0,34:34:99:1285,99,0	1/1:2,20:22:57.16:755,57,0	1/1:0,18:18:54.18:717,54,0	1/1:0,21:21:63.20:815,63,0	1/1:3,24:27:78.21:1040,78,0	1/1:1,23:24:66.19:863,66,0	1/1:0,16:16:48.16:652,48,0	1/1:3,20:23:69.21:900,69,0	1/1:1,9:10:24.08:324,24,0
chr10	29258536	.	ATG	A	24845.01	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=15.246;DP=667;FS=1.244;HRun=0;HaplotypeScore=181.5105;InbreedingCoeff=0.9995;MQ=78.72;MQ0=0;MQRankSum=-8.926;QD=44.53;ReadPosRankSum=3.818;VQSLOD=5.1160;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,33:35:99:1532,102,0	1/1:3,12:15:45.15:709,45,0	0/0:24,0:24:72.22:0,72,1336	0/0:19,0:19:48.46:0,48,929	1/1:3,39:43:99:1857,123,0	1/1:1,24:25:75.24:1127,75,0	1/1:1,28:29:81.27:1191,81,0	1/1:0,27:27:81.28:1257,81,0	0/0:23,0:23:69.24:0,69,1386	1/1:0,25:25:75.26:1187,75,0	1/1:0,18:18:54.18:825,54,0	1/1:1,24:25:75.25:1174,75,0	1/1:2,27:29:84.28:1292,84,0	1/1:2,16:18:54.18:853,54,0	1/1:3,29:32:93.31:1425,93,0	1/1:4,19:23:69.23:1083,69,0	0/0:28,0:28:84.29:0,84,1688	0/0:15,0:15:45.15:0,45,874	1/1:1,18:19:48.10:730,48,0	1/1:0,33:33:99:1509,99,0	1/1:1,20:21:57.66:889,58,0	1/1:0,18:18:54.18:831,54,0	1/1:0,24:24:62.97:937,63,0	1/1:3,24:27:78.26:1224,78,0	1/1:0,23:23:63.21:989,63,0	1/1:0,16:16:48.16:764,48,0	1/1:2,21:23:69.23:1081,69,0	1/1:1,9:10:24.08:379,24,0
chr10	29259460	.	ATCAGTGGCATGTGGTCATCATGCATCTCATCAT	A	258.14	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.984;DP=722;FS=0.000;HRun=0;HaplotypeScore=557.5494;InbreedingCoeff=0.8744;MQ=93.12;MQ0=0;MQRankSum=-2.925;QD=21.51;ReadPosRankSum=-0.670;VQSLOD=-0.1166;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,10:12:6.02:338,6,0	0/0:7,0:7:18.05:0,18,1967	0/0:30,0:30:90.31:0,90,6394	0/0:33,0:33:84.95:0,85,6192	0/0:26,0:26:78.25:0,78,9034	0/0:32,0:32:93.32:0,93,12794	0/0:21,0:21:60.21:0,60,6978	0/0:33,0:33:87.29:0,87,7112	0/0:25,0:25:72.25:0,72,8660	0/0:37,0:37:99:0,111,12885	0/0:36,0:36:99:0,105,12084	0/0:37,0:37:99:0,108,13157	0/0:28,0:28:84.27:0,84,10347	0/0:30,0:30:87.28:0,87,10955	0/0:35,0:35:99:0,99,11729	0/0:35,0:35:99:0,99,13330	0/0:18,0:18:54.17:0,54,6509	0/0:14,0:14:39.09:0,39,4698	0/0:10,0:10:24.08:0,24,2117	0/0:34,0:34:96.33:0,96,12153	0/0:28,0:28:81.28:0,81,9656	0/0:24,0:24:60.21:0,60,7347	0/0:32,0:32:96.33:0,96,11987	0/0:22,0:22:63.22:0,63,8372	0/0:23,0:23:69.23:0,69,8190	0/0:30,0:30:86.96:0,87,11181	0/0:21,0:21:60.21:0,60,7231	0/0:9,0:9:27.09:0,27,4130
chr10	29263126	.	GT	G	12797.45	PASS	AB=0.692;AC=49;AF=0.875;AN=56;BaseQRankSum=1.441;DP=638;FS=0.711;HRun=10;HaplotypeScore=69.8619;InbreedingCoeff=0.6836;MQ=70.81;MQ0=0;MQRankSum=-2.784;QD=21.40;ReadPosRankSum=0.600;VQSLOD=5.7039;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:45.11:0,45,490	1/1:1,7:8:23.87:197,24,0	0/0:12,1:13:0.60:0,1,180	0/0:10,0:10:3.84:0,4,13	1/1:3,33:36:87.42:752,87,0	1/1:2,26:28:68.98:599,69,0	1/1:1,17:18:44.99:391,45,0	1/1:5,31:36:83.95:725,84,0	1/1:3,13:16:38.98:338,39,0	1/1:4,24:28:35.76:536,36,0	1/1:0,22:22:62.98:547,63,0	1/1:3,17:20:47.99:417,48,0	1/1:5,23:28:65.87:572,66,0	1/1:4,25:29:71.97:625,72,0	1/1:2,26:28:77.98:677,78,0	1/1:4,24:28:68.96:599,69,0	1/1:3,17:20:44.98:391,45,0	1/1:2,11:13:34.55:291,35,0	1/1:3,20:23:59.98:521,60,0	1/1:5,27:32:78.87:679,79,0	1/1:1,14:15:38.99:339,39,0	1/1:6,24:30:38.66:565,39,0	1/1:4,23:27:68.97:599,69,0	1/1:2,18:20:53.99:469,54,0	1/1:2,19:21:53.98:469,54,0	1/1:6,23:30:70.99:605,71,0	1/1:2,31:33:92.97:807,93,0	0/1:5,4:9:18.19:89,0,18
chr10	29265886	.	CACGT	C	1665.02	PASS	AB=0.986;AC=26;AF=0.464;AN=56;BaseQRankSum=10.963;DP=505;FS=11.466;HRun=0;HaplotypeScore=173.6240;InbreedingCoeff=-0.4324;MQ=49.60;MQ0=13;MQRankSum=-4.224;QD=4.30;ReadPosRankSum=10.637;VQSLOD=0.2231;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:9,7:16:27.56:485,28,0	0/1:7,0:7:29.72:30,0,72	0/0:30,0:13:37.88:0,38,454	0/0:39,0:10:29.97:0,30,448	0/1:23,0:23:12.64:13,0,280	1/1:16,0:16:25.20:104,25,0	0/1:37,0:36:52.58:53,0,165	0/0:21,0:19:6.21:0,6,382	0/1:11,0:11:17.44:17,0,38	0/1:18,0:18:48.55:49,0,171	0/1:23,0:23:65.16:65,0,141	0/1:13,0:14:14.59:129,0,15	0/1:15,0:15:23.65:124,0,24	0/1:11,0:12:4.60:78,0,5	0/1:19,0:19:67.87:68,0,85	0/1:19,0:19:70.14:70,0,132	0/0:16,0:16:14.80:0,15,256	0/0:11,0:11:7.72:0,8,133	0/1:16,0:14:46.78:47,0,157	0/1:18,0:19:20.38:20,0,91	0/1:24,0:25:11.41:11,0,235	0/1:10,0:10:41.91:86,0,42	0/1:11,0:11:3.56:4,0,38	0/1:18,0:18:45.81:46,0,170	0/1:20,0:20:73.65:122,0,74	0/1:16,0:17:18.75:156,0,19	0/1:9,0:9:42.74:43,0,48	1/1:12,0:11:2.92:8,3,0
chr10	29265888	.	CGTGT	C	10863.55	PASS	AB=0.955;AC=52;AF=0.929;AN=56;BaseQRankSum=-2.133;DP=498;FS=5.140;HRun=0;HaplotypeScore=142.9817;InbreedingCoeff=0.4969;MQ=49.15;MQ0=14;MQRankSum=1.408;QD=23.62;ReadPosRankSum=5.970;VQSLOD=4.4197;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:17:4.50:89,5,0	1/1:4,3:7:15.05:251,15,0	0/1:30,0:13:1.86:2,0,284	0/0:38,0:9:15.01:0,15,266	1/1:13,10:23:29.76:496,30,0	1/1:3,13:16:39.13:654,39,0	1/1:12,24:35:57.20:962,57,0	0/1:18,2:18:10.74:362,0,11	1/1:12,0:12:25.97:280,26,0	1/1:4,14:18:41.88:638,42,0	1/1:10,13:23:47.28:661,47,0	1/1:4,10:14:35.77:593,36,0	1/1:5,9:15:33.11:543,33,0	1/1:3,7:11:27.08:421,27,0	1/1:2,16:18:18.95:308,19,0	1/1:7,10:17:36.12:597,36,0	1/1:16,0:16:8.46:53,8,0	1/1:11,0:11:17.92:192,18,0	1/1:7,9:14:24.97:388,25,0	1/1:5,15:19:15.05:241,15,0	1/1:7,17:24:18.06:307,18,0	1/1:4,5:9:24.06:382,24,0	1/1:5,5:11:15.05:247,15,0	1/1:9,9:18:26.81:390,27,0	1/1:5,15:20:42.13:687,42,0	1/1:7,10:17:45.15:705,45,0	1/1:3,6:9:21.05:313,21,0	1/1:1,11:11:6.02:102,6,0
chr10	29265901	.	GTGTGTA	G	1757.33	PASS	AB=1.000;AC=26;AF=0.464;AN=56;BaseQRankSum=-4.169;DP=482;FS=12.060;HRun=0;HaplotypeScore=191.6738;InbreedingCoeff=-0.2464;MQ=45.02;MQ0=15;MQRankSum=2.450;QD=4.59;ReadPosRankSum=-4.621;VQSLOD=0.5272;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:29.70:0,30,394	0/1:6,0:6:6.24:32,0,6	0/1:19,0:10:51.42:51,0,292	0/1:30,0:6:21.68:22,0,223	1/1:19,0:19:1.64:62,2,0	0/1:19,0:19:20.07:51,0,20	0/1:36,0:34:33.31:40,0,33	0/1:21,0:19:79.03:79,0,242	1/1:12,2:14:30.26:392,30,0	0/1:15,0:15:36.97:136,0,37	0/1:23,0:23:4.08:63,0,4	0/1:16,0:16:22.69:81,0,23	0/1:15,0:15:28.27:28,0,46	0/1:15,0:15:5.06:66,0,5	0/0:16,0:16:11.49:0,11,34	0/1:16,0:16:10.48:67,0,10	1/1:11,2:13:11.26:134,11,0	1/1:9,1:9:16:357,16,0	0/1:19,0:16:41.90:42,0,131	0/0:18,0:17:6.61:0,7,20	0/0:23,0:23:4.39:0,4,51	0/1:10,0:10:0.47:0,0,19	0/1:11,0:11:1.78:35,0,2	0/1:18,0:18:3:3,0,64	0/1:22,0:22:29.48:35,0,29	0/1:16,0:16:25.86:138,0,26	0/0:8,0:8:9.29:0,9,26	0/0:12,0:11:2.97:0,3,21
chr10	29265903	.	GTGTA	G	6643.81	PASS	AB=1.000;AC=48;AF=0.857;AN=56;BaseQRankSum=0.743;DP=480;FS=4.757;HRun=0;HaplotypeScore=165.9439;InbreedingCoeff=0.1010;MQ=46.46;MQ0=12;MQRankSum=0.760;QD=14.51;ReadPosRankSum=7.369;VQSLOD=3.9969;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:13.19:0,13,196	1/1:6,0:6:15.01:162,15,0	0/1:17,0:10:51.42:51,0,228	0/1:29,0:7:34.34:34,0,172	1/1:19,0:19:29.63:265,30,0	1/1:18,1:19:35.92:349,36,0	1/1:36,0:34:56.98:505,57,0	0/1:21,0:19:99:164,0,106	1/1:7,7:14:30.66:448,31,0	1/1:15,0:15:16.98:352,17,0	1/1:23,0:23:38.27:393,38,0	1/1:17,0:17:20.40:339,20,0	1/1:14,1:15:18.07:359,18,0	1/1:15,0:15:26.77:233,27,0	1/1:16,0:16:18.93:196,19,0	1/1:16,0:16:35.98:333,36,0	1/1:9,4:13:11.59:117,12,0	1/1:5,5:9:16.99:335,17,0	0/1:19,0:17:75.19:176,0,75	1/1:19,0:18:11.04:125,11,0	0/1:23,0:23:24.97:143,0,25	1/1:9,0:9:20.99:233,21,0	1/1:10,1:11:14.76:126,15,0	1/1:16,1:17:12.10:186,12,0	1/1:22,0:22:29.68:395,30,0	1/1:16,0:16:39.86:403,40,0	1/1:8,0:8:17.96:176,18,0	0/1:12,0:11:8.98:45,0,9
chr10	29265905	.	GTA	G	1514.99	PASS	AB=0.991;AC=35;AF=0.625;AN=56;BaseQRankSum=-1.638;DP=480;FS=4.099;HRun=0;HaplotypeScore=171.6519;InbreedingCoeff=-0.2968;MQ=46.46;MQ0=12;MQRankSum=1.672;QD=3.35;ReadPosRankSum=-1.270;VQSLOD=2.3421;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:22:24.06:24,0,89	1/1:6,0:6:0.29:38,0,0	0/1:14,3:10:51.42:51,0,165	0/1:29,0:7:36.28:36,0,96	1/1:19,0:19:10.32:77,10,0	1/1:18,1:19:3.99:84,4,0	0/1:36,0:34:13.10:63,0,13	0/1:21,0:19:92.72:99,0,93	1/1:14,0:14:30.34:227,30,0	0/1:15,0:15:2.64:141,0,3	1/1:20,0:20:11.21:91,11,0	0/1:17,0:17:11.17:39,0,11	0/1:15,0:15:3.17:46,0,3	0/1:15,0:15:4.17:20,0,4	0/0:16,0:16:0.95:0,1,6	1/1:16,0:16:15.93:101,16,0	1/1:12,1:13:11.42:80,11,0	1/1:10,0:9:17.17:174,17,0	0/1:20,0:18:31.68:32,0,91	0/1:19,0:18:7.99:12,0,8	0/1:24,0:24:11.17:11,0,54	0/1:9,0:9:4.97:24,0,5	0/1:12,0:12:1.25:36,0,1	0/1:17,0:17:5.39:5,0,29	0/1:23,0:23:4.88:32,0,5	0/1:17,0:17:41.66:76,0,42	1/1:7,0:7:5.66:41,6,0	0/0:12,0:11:3.15:0,3,21
chr10	29265939	.	A	AAGAG	7999.73	PASS	AB=1.000;AC=50;AF=0.893;AN=56;BaseQRankSum=-2.424;DP=388;FS=4.653;HRun=0;HaplotypeScore=162.2104;InbreedingCoeff=0.6106;MQ=49.58;MQ0=4;MQRankSum=-1.166;QD=21.92;ReadPosRankSum=2.363;VQSLOD=4.1611;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:25:50.75:738,51,0	1/1:6,0:6:12.04:227,12,0	0/0:10,0:5:9.47:0,9,134	0/0:13,0:7:6.01:0,6,80	0/1:17,0:17:0.30:47,0,0	1/1:14,0:14:20.43:281,20,0	1/1:28,0:27:34.57:342,35,0	1/1:11,0:11:18.03:255,18,0	1/1:12,0:11:29.97:406,30,0	1/1:7,1:8:22.31:383,22,0	1/1:16,0:15:6.02:74,6,0	1/1:19,0:19:15.46:274,15,0	1/1:21,0:21:45.05:647,45,0	1/1:13,0:13:15.04:269,15,0	1/1:7,9:17:30.09:491,30,0	1/1:13,0:13:27.05:395,27,0	1/1:13,0:13:30.09:453,30,0	1/1:10,0:9:24.08:320,24,0	1/1:6,5:11:27.09:585,27,0	1/1:3,6:9:17.42:221,17,0	1/1:10,4:14:11.45:211,11,0	1/1:13,0:13:8.19:146,8,0	0/1:9,0:9:0.21:0,0,0	1/1:18,0:18:11.84:133,12,0	1/1:21,0:21:20.72:288,21,0	1/1:14,0:14:30.05:423,30,0	1/1:11,0:11:24.05:322,24,0	1/1:1,0:1:3.01:68,3,0
chr10	29265942	.	A	AGAGAG	9376.96	PASS	AB=1.000;AC=51;AF=0.911;AN=56;BaseQRankSum=-3.308;DP=416;FS=4.418;HRun=0;HaplotypeScore=167.4512;InbreedingCoeff=0.6095;MQ=49.32;MQ0=8;MQRankSum=-0.424;QD=23.86;ReadPosRankSum=3.087;VQSLOD=4.7119;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:23:50.14:538,50,0	1/1:8,0:8:14.92:330,15,0	0/0:10,0:5:9.01:0,9,157	0/0:13,0:7:6.02:0,6,88	0/1:19,0:19:0.47:47,0,0	1/1:14,0:15:22.80:407,23,0	1/1:14,12:27:37.41:458,37,0	1/1:12,0:11:24.03:474,24,0	1/1:13,0:11:29.85:440,30,0	1/1:10,0:10:22.78:478,23,0	1/1:17,0:15:5.45:73,5,0	1/1:11,7:22:21.29:368,21,0	1/1:14,7:22:49.27:939,49,0	1/1:8,6:14:16.28:334,16,0	1/1:19,0:19:37.61:527,38,0	1/1:10,8:19:27.05:524,27,0	1/1:12,0:12:30.05:435,30,0	1/1:10,0:9:24.08:354,24,0	1/1:10,0:10:27.09:448,27,0	1/1:9,0:9:18.31:171,18,0	1/1:15,0:14:10.22:182,10,0	1/1:5,7:13:7.53:165,8,0	1/1:11,0:11:0.06:0,0,0	1/1:8,8:19:12.47:174,12,0	1/1:14,6:23:24.45:398,24,0	1/1:11,0:12:30.05:508,30,0	1/1:7,8:15:24.54:514,25,0	1/1:3,0:2:3.01:90,3,0
chr10	29265943	.	G	GAGA	7683.08	PASS	AB=0.588;AC=51;AF=0.911;AN=56;BaseQRankSum=-2.554;DP=379;FS=16.747;HRun=0;HaplotypeScore=142.3255;InbreedingCoeff=0.5212;MQ=50.42;MQ0=9;MQRankSum=-1.158;QD=21.58;ReadPosRankSum=5.605;VQSLOD=3.1397;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:23:50.79:670,51,0	1/1:1,6:8:8.57:249,9,0	0/0:10,0:5:9:0,9,134	0/0:13,0:7:6.02:0,6,96	1/1:4,13:18:2.82:52,3,0	1/1:4,9:13:4.87:263,5,0	1/1:23,3:25:14.52:260,15,0	1/1:4,7:12:23.90:369,24,0	1/1:5,6:9:24.08:448,24,0	1/1:7,3:10:15.48:343,15,0	1/1:4,10:12:5.55:74,6,0	1/1:14,2:16:10.23:265,10,0	1/1:15,5:20:34.90:679,35,0	1/1:8,4:12:3.86:242,4,0	1/1:18,1:19:15.33:328,15,0	1/1:13,5:17:24.07:394,24,0	1/1:3,5:11:27.09:529,27,0	1/1:2,6:9:24.08:496,24,0	1/1:7,2:9:24.08:368,24,0	1/1:9,0:9:13.83:130,14,0	1/1:14,0:13:11.47:176,11,0	1/1:8,2:10:9.02:147,9,0	0/1:3,5:10:0.08:0,0,1	1/1:15,1:16:8.13:94,8,0	1/1:14,3:18:19.23:289,19,0	1/1:5,5:10:26.94:391,27,0	1/1:12,2:14:7.47:362,7,0	1/1:3,1:2:3:67,3,0
chr10	29265949	.	GGAGA	G	124.63	PASS	AB=0.933;AC=5;AF=0.096;AN=52;BaseQRankSum=3.205;DP=420;FS=7.003;HRun=0;HaplotypeScore=158.3356;InbreedingCoeff=0.2059;MQ=48.04;MQ0=14;MQRankSum=-2.208;QD=1.81;ReadPosRankSum=1.057;VQSLOD=2.1424;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:24,8:32:15.28:99,0,15	0/0:9,0:9:6.01:0,6,101	./.	./.	0/0:18,0:18:5.65:0,6,99	0/0:13,0:13:0.46:0,0,2	0/0:21,0:24:21.54:0,22,384	0/0:15,0:14:16.87:0,17,258	0/0:12,0:10:6.91:0,7,81	0/0:13,0:13:24.08:0,24,430	1/1:14,0:11:2.67:5,3,0	0/0:15,0:18:12.04:0,12,205	0/0:18,0:19:15.34:0,15,206	0/0:14,0:15:12.93:0,13,205	0/0:19,0:21:14.41:0,14,274	0/0:16,0:16:6.96:0,7,108	0/1:12,0:12:43.59:92,0,44	0/1:11,0:10:20.28:28,0,20	0/0:13,0:12:0.47:0,0,1	0/0:11,0:10:0.47:0,0,1	0/0:15,0:14:12.04:0,12,205	0/0:11,0:11:6.02:0,6,100	0/0:8,0:8:0:0,0,0	0/0:13,0:13:3:0,3,61	0/0:19,0:20:9.50:0,9,137	0/0:16,0:17:27.56:0,28,485	0/0:18,0:19:23.78:0,24,325	0/0:5,0:3:6.02:0,6,100
chr10	29266301	.	A	AC	15189.31	PASS	AB=1.000;AC=47;AF=0.839;AN=56;BaseQRankSum=-9.439;DP=694;FS=6.565;HRun=7;HaplotypeScore=81.6782;InbreedingCoeff=0.6047;MQ=69.38;MQ0=13;MQRankSum=-3.842;QD=24.19;ReadPosRankSum=4.604;VQSLOD=5.2234;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:56.57:0,57,539	1/1:1,12:12:24.07:290,24,0	0/0:18,0:17:33.04:0,33,315	0/0:22,0:20:53.03:0,53,460	1/1:4,28:31:75.23:905,75,0	1/1:5,21:26:57.17:686,57,0	1/1:4,17:20:36.11:435,36,0	1/1:6,27:32:78.21:913,78,0	0/1:26,0:26:10.11:95,0,10	1/1:3,26:29:52.27:909,52,0	1/1:4,28:32:69.19:820,69,0	1/1:4,22:26:60.18:725,60,0	1/1:2,25:27:63.17:740,63,0	1/1:3,29:31:73.78:873,74,0	1/1:2,31:33:84.26:1013,84,0	1/1:4,23:26:30.63:593,31,0	0/1:15,0:15:29.13:29,0,41	0/1:12,0:12:32.25:32,0,80	1/1:11,8:19:27.18:293,27,0	1/1:3,18:20:22.18:551,22,0	1/1:2,17:19:39.12:470,39,0	1/1:4,29:32:69.21:830,69,0	1/1:5,21:26:60.08:722,60,0	1/1:5,20:25:51.26:589,51,0	1/1:3,28:29:69.17:816,69,0	1/1:4,22:25:57.13:660,57,0	1/1:2,37:38:64.34:1057,64,0	1/1:0,4:4:12.04:145,12,0
chr10	29266304	.	C	CA	4160.98	PASS	AB=0.945;AC=37;AF=0.661;AN=56;BaseQRankSum=4.599;DP=708;FS=4.909;HRun=0;HaplotypeScore=123.0099;InbreedingCoeff=-0.0386;MQ=69.95;MQ0=14;MQRankSum=-3.739;QD=6.53;ReadPosRankSum=12.220;VQSLOD=1.7715;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:74:0,74,863	1/1:13,0:12:21.06:91,21,0	0/0:20,0:18:51.06:0,51,621	0/0:23,0:21:60.12:0,60,762	1/1:30,0:29:27.63:259,28,0	0/1:26,0:26:37.43:136,0,37	1/1:18,0:17:8.04:114,8,0	0/1:32,0:31:40.40:170,0,40	1/1:8,19:27:37.09:472,37,0	0/1:35,0:35:50.45:174,0,50	1/1:31,0:31:15.66:205,16,0	0/1:27,0:27:63.78:124,0,64	1/1:30,0:30:3.63:138,4,0	0/1:32,0:31:4.67:170,0,5	1/1:34,0:34:23.55:210,24,0	1/1:26,0:25:4.65:128,5,0	0/1:7,8:15:2.32:188,0,2	0/1:6,8:14:27.99:175,0,28	0/1:21,0:20:35.67:36,0,122	0/1:21,0:20:26.53:144,0,27	1/1:18,0:18:33.25:132,33,0	0/1:33,0:32:6.87:191,0,7	0/1:27,0:27:38.46:179,0,38	0/1:25,0:25:43.53:101,0,44	1/1:31,0:29:16.69:213,17,0	0/1:27,0:26:30.33:124,0,30	1/1:39,0:38:16.41:242,16,0	1/1:5,0:5:10.69:47,11,0
chr10	29266305	.	C	CA	4028.45	PASS	AB=0.956;AC=34;AF=0.607;AN=56;BaseQRankSum=5.441;DP=708;FS=8.459;HRun=0;HaplotypeScore=123.6116;InbreedingCoeff=-0.1683;MQ=68.72;MQ0=14;MQRankSum=-3.784;QD=6.31;ReadPosRankSum=12.470;VQSLOD=1.0918;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:73.89:0,74,848	0/1:13,0:12:2.54:67,0,3	0/0:18,0:16:45.10:0,45,568	0/0:24,0:22:60.13:0,60,771	1/1:32,0:31:26.19:238,26,0	0/1:26,0:26:37.45:138,0,37	1/1:18,0:17:8:103,8,0	0/1:33,0:32:26.03:162,0,26	1/1:7,19:26:37.03:437,37,0	0/1:35,0:35:99:164,0,103	1/1:30,0:30:13.68:191,14,0	0/1:25,0:25:18.43:128,0,18	0/1:30,0:30:17.12:127,0,17	0/1:32,0:31:5.51:161,0,6	1/1:34,0:34:23.25:227,23,0	0/1:26,0:25:18.52:112,0,19	0/1:6,8:14:22.83:140,0,23	0/1:7,8:15:12.38:174,0,12	0/1:21,0:20:24.61:25,0,198	0/1:22,0:21:41.12:155,0,41	1/1:18,0:18:33.01:126,33,0	1/1:35,0:34:16.67:265,17,0	0/1:27,0:27:63.01:181,0,63	0/1:25,0:25:38.49:99,0,38	1/1:30,0:28:24.52:209,25,0	0/1:26,0:25:49.37:115,0,49	1/1:40,0:39:16.64:250,17,0	0/1:5,0:5:11.10:33,0,11
chr10	29267197	.	T	TCCATCA	8773.95	PASS	AB=0.585;AC=45;AF=0.804;AN=56;BaseQRankSum=-0.176;DP=461;FS=15.781;HRun=0;HaplotypeScore=96.1086;InbreedingCoeff=0.7981;MQ=72.54;MQ0=2;MQRankSum=-3.708;QD=25.07;ReadPosRankSum=0.621;VQSLOD=3.5721;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:18,2:20:27.46:434,27,0	1/1:3,2:5:3.01:99,3,0	0/0:39,0:25:38.17:0,38,567	0/0:33,0:29:43.89:0,44,668	1/1:12,0:12:20.45:386,20,0	1/1:2,12:15:9.03:297,9,0	1/1:27,0:26:41.72:847,42,0	1/1:26,0:25:39.10:673,39,0	0/0:13,0:13:33.11:0,33,632	1/1:6,3:9:9.01:222,9,0	1/1:11,1:12:27.02:439,27,0	1/1:20,3:23:42.13:918,42,0	1/1:6,15:21:12.04:302,12,0	1/1:9,16:26:21.54:633,22,0	1/1:6,11:18:15.05:428,15,0	1/1:3,11:14:9.03:251,9,0	0/0:15,0:15:21.08:0,21,283	0/0:11,0:11:15.88:0,16,253	1/1:3,6:9:20.99:360,21,0	1/1:3,6:10:9.03:142,9,0	1/1:11,1:12:8.98:132,9,0	1/1:7,1:8:18.05:349,18,0	1/1:7,2:9:15.02:273,15,0	0/1:9,21:28:0.12:0,0,0	1/1:9,8:17:6.02:151,6,0	1/1:2,11:13:27.08:626,27,0	1/1:9,1:10:30.09:748,30,0	1/1:3,0:3:3.01:62,3,0
chr10	29267260	.	ACCGTCG	A	38.03	PASS	AB=0.781;AC=2;AF=0.036;AN=56;BaseQRankSum=-0.511;DP=444;FS=4.467;HRun=0;HaplotypeScore=123.5806;InbreedingCoeff=-0.0392;MQ=43.10;MQ0=48;MQRankSum=-1.710;QD=1.31;ReadPosRankSum=-1.455;VQSLOD=2.2680;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:20,0:18:18.44:34,0,18	0/0:2,0:2:5.98:0,6,71	0/0:17,0:1:2.98:0,3,22	0/0:18,0:3:8.32:0,8,67	0/0:19,0:19:13.25:0,13,184	0/0:24,0:22:39.35:0,39,431	0/0:34,0:31:47.31:0,47,602	0/0:14,0:11:17.85:0,18,108	0/1:2,7:8:12.97:92,0,13	0/0:12,0:8:16.72:0,17,144	0/0:6,0:6:9.03:0,9,121	0/0:19,0:18:26.41:0,26,292	0/0:16,0:15:38.04:0,38,408	0/0:26,0:26:65.55:0,66,780	0/0:13,0:13:29.74:0,30,251	0/0:10,0:10:26.08:0,26,274	0/0:4,6:9:4.71:0,5,28	0/0:4,0:4:5.81:0,6,34	0/0:13,0:10:17.68:0,18,180	0/0:7,0:7:18.40:0,18,187	0/0:44,0:28:24.72:0,25,316	0/0:9,0:9:6.02:0,6,79	0/0:7,0:5:11.84:0,12,88	0/0:41,0:34:66.19:0,66,850	0/0:13,0:10:11.26:0,11,118	0/0:12,0:11:24.56:0,25,244	0/0:22,0:20:26.76:0,27,215	0/0:3,0:2:6.02:0,6,77
chr10	29267275	.	G	GTCA	5229.16	PASS	AB=0.940;AC=32;AF=0.593;AN=54;BaseQRankSum=-6.862;DP=467;FS=4.894;HRun=0;HaplotypeScore=97.7295;InbreedingCoeff=-0.4257;MQ=47.84;MQ0=48;MQRankSum=2.598;QD=12.85;ReadPosRankSum=-3.466;VQSLOD=3.4511;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:17:5.51:34,6,0	1/1:3,0:3:9:89,9,0	./.	0/0:16,0:3:5.81:0,6,55	0/1:4,9:13:72.92:123,0,73	0/1:23,0:21:19.32:423,0,19	0/1:35,0:33:99:360,0,154	0/0:15,0:11:2.20:0,2,53	0/1:10,0:9:16.45:16,0,19	0/1:16,0:12:19.17:199,0,19	0/1:8,0:8:48.24:114,0,48	0/1:4,17:21:68.33:87,0,68	0/1:18,0:17:76.84:349,0,77	0/1:27,0:27:99:436,0,191	1/1:14,0:14:0.48:280,0,0	1/1:16,0:16:1.75:385,2,0	1/1:8,0:7:2.99:23,3,0	1/1:2,0:2:2.97:20,3,0	0/1:18,0:12:39.68:40,0,43	0/1:10,0:10:34.25:243,0,34	0/1:43,1:29:71.19:340,0,71	0/0:3,11:14:3.30:0,3,15	1/1:9,0:7:11.97:124,12,0	0/1:44,0:37:43.53:912,0,44	0/1:13,0:10:16.26:129,0,16	0/1:11,1:11:16.87:281,0,17	0/1:21,0:19:33.89:85,0,34	1/1:4,0:3:9:135,9,0
chr10	29267307	.	C	CATC	6198.25	PASS	AB=0.980;AC=53;AF=0.946;AN=56;BaseQRankSum=-1.798;DP=561;FS=0.000;HRun=0;HaplotypeScore=105.8741;InbreedingCoeff=0.2031;MQ=61.67;MQ0=17;MQRankSum=-0.420;QD=11.05;ReadPosRankSum=1.716;VQSLOD=4.1879;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:28:2.98:22,3,0	1/1:7,0:7:9:91,9,0	1/1:18,0:17:0.94:2,1,0	0/1:19,0:18:0:0,0,0	1/1:13,0:12:9.03:142,9,0	1/1:25,0:25:21.47:471,21,0	1/1:34,0:32:42.03:473,42,0	1/1:34,0:31:17.33:100,17,0	0/1:15,0:16:15.46:31,0,15	1/1:23,0:19:21.03:229,21,0	1/1:11,0:11:15:157,15,0	0/1:25,0:25:9.74:95,0,10	1/1:18,0:18:33.02:453,33,0	1/1:23,0:23:24.46:527,24,0	1/1:17,0:17:24.03:328,24,0	1/1:22,0:22:37.83:429,38,0	1/1:15,0:15:2.99:24,3,0	1/1:11,0:11:5.59:39,6,0	1/1:13,0:10:7.25:58,7,0	1/1:13,0:13:17.84:257,18,0	1/1:42,0:37:19.12:370,19,0	1/1:18,0:17:0.45:1,0,0	1/1:10,0:9:12:129,12,0	1/1:46,0:39:63.15:1023,63,0	1/1:20,0:18:15:157,15,0	1/1:16,0:16:27.01:337,27,0	1/1:8,9:18:11.97:117,12,0	1/1:5,0:5:9:136,9,0
chr10	29268164	.	AT	A	1058.35	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=10.635;DP=603;FS=0.561;HRun=9;HaplotypeScore=66.7921;InbreedingCoeff=0.9907;MQ=87.70;MQ0=0;MQRankSum=-5.612;QD=23.01;ReadPosRankSum=1.180;VQSLOD=4.5073;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:33.09:0,33,370	0/0:12,0:12:36.11:0,36,415	0/0:22,1:24:28.81:0,29,492	0/0:19,1:20:13.88:0,14,355	0/0:27,0:27:75.21:0,75,856	0/0:32,0:33:87.09:0,87,984	0/0:13,0:13:36.09:0,36,405	0/0:36,0:36:87.25:0,87,996	1/1:1,13:14:42.02:384,42,0	0/0:19,0:19:51.14:0,51,581	0/0:21,0:21:60.18:0,60,693	0/0:15,0:15:42.12:0,42,485	0/0:28,0:28:78.22:0,78,890	0/0:22,0:22:54.16:0,54,622	0/0:24,0:24:69.21:0,69,796	0/0:14,0:14:39.10:0,39,441	1/1:1,12:13:36.02:329,36,0	1/1:2,17:19:54:488,54,0	0/0:24,0:24:66.17:0,66,743	0/0:27,0:28:72.05:0,72,810	0/0:24,0:24:53.60:0,54,622	0/0:21,0:21:63.17:0,63,717	0/0:22,0:22:60.15:0,60,680	0/0:25,1:26:44.75:0,45,769	0/0:25,0:25:66.18:0,66,752	0/0:28,0:28:75.21:0,75,857	0/0:29,0:29:87.23:0,87,984	0/0:8,0:8:20.93:0,21,222
chr10	29268250	.	TC	T	2204.41	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.833;DP=668;FS=0.000;HRun=1;HaplotypeScore=61.4140;InbreedingCoeff=0.9998;MQ=87.08;MQ0=1;MQRankSum=-2.978;QD=36.74;ReadPosRankSum=1.368;VQSLOD=3.8960;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:42.14:0,42,671	0/0:13,0:13:39.11:0,39,598	0/0:25,0:25:41.61:0,42,1090	0/0:20,0:20:44.92:0,45,750	0/0:37,0:37:99:0,111,1749	0/0:21,0:21:63.21:0,63,1007	0/0:19,0:19:57.18:0,57,885	0/0:33,0:33:96.32:0,96,1513	1/1:1,28:29:78.26:1091,78,0	0/0:24,0:24:72.20:0,72,1124	0/0:25,0:25:75.26:0,75,1199	0/0:18,0:18:54.18:0,54,859	0/0:27,0:27:81.28:0,81,1295	0/0:19,0:19:57.19:0,57,911	0/0:33,0:32:99:0,99,1531	0/0:16,0:16:48.15:0,48,743	1/1:1,13:14:42.14:586,42,0	1/1:0,17:17:48.16:670,48,0	0/0:24,0:24:72.24:0,72,1131	0/0:33,0:33:99:0,99,1580	0/0:27,0:27:81.28:0,81,1292	0/0:26,0:26:78.26:0,78,1221	0/0:26,0:26:75.26:0,75,1189	0/0:26,0:25:72.24:0,72,1139	0/0:31,0:31:93.32:0,93,1482	0/0:28,0:28:84.27:0,84,1320	0/0:32,0:32:96.31:0,96,1509	0/0:11,0:11:33.11:0,33,527
chr10	29271654	.	T	TGCC	32146.77	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-8.696;DP=653;FS=13.709;HRun=0;HaplotypeScore=101.0635;InbreedingCoeff=0.9915;MQ=74.32;MQ0=0;MQRankSum=-8.499;QD=52.79;ReadPosRankSum=5.380;VQSLOD=6.3872;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,29:34:63.17:1434,63,0	1/1:0,13:14:33.07:701,33,0	0/0:22,0:21:45.04:0,45,656	0/0:21,0:21:46.77:0,47,732	1/1:1,16:17:23.81:566,24,0	1/1:2,10:13:27.05:587,27,0	1/1:0,23:24:60.21:1415,60,0	1/1:8,25:36:99:2330,105,0	1/1:3,28:31:78.18:1724,78,0	1/1:1,22:24:72.23:1636,72,0	1/1:1,11:12:21.07:496,21,0	1/1:2,22:25:63.17:1435,63,0	1/1:2,27:31:81.19:1799,81,0	1/1:4,23:27:78.05:1585,78,0	1/1:1,45:48:99:2518,111,0	1/1:2,31:35:90.31:2105,90,0	1/1:2,22:24:63.17:1436,63,0	1/1:2,14:16:33.11:779,33,0	1/1:2,10:13:39.08:756,39,0	1/1:2,18:22:39.09:829,39,0	1/1:1,18:19:32.81:728,33,0	1/1:2,20:23:42.10:941,42,0	1/1:1,12:13:18.06:425,18,0	1/1:4,23:28:54.19:1276,54,0	1/1:0,14:16:33.11:780,33,0	1/1:1,18:19:57.20:1301,57,0	1/1:1,24:26:60.21:1414,60,0	1/1:0,19:19:51.13:1151,51,0
chr10	29274480	.	TTGTGTGTGTG	T	18989.50	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-0.599;DP=627;FS=0.533;HRun=0;HaplotypeScore=193.3685;InbreedingCoeff=0.9117;MQ=62.52;MQ0=6;MQRankSum=-4.534;QD=42.48;ReadPosRankSum=3.179;VQSLOD=4.6558;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:34:43.74:0,44,228	1/1:5,2:7:6.02:184,6,0	0/0:43,0:33:16.94:0,17,941	0/0:37,0:27:39.13:0,39,1695	1/1:5,14:19:26.96:612,27,0	1/1:4,19:23:42.07:1148,42,0	1/1:5,11:16:21.03:573,21,0	1/1:18,17:35:43.79:1250,44,0	0/0:12,0:23:21.54:0,22,763	1/1:6,18:23:54.14:1566,54,0	1/1:2,15:17:36.08:918,36,0	1/1:5,14:19:36.12:1107,36,0	1/1:5,11:16:33.11:1014,33,0	1/1:2,11:13:24.08:738,24,0	1/1:7,16:23:30.10:922,30,0	1/1:7,17:24:36.12:1107,36,0	0/0:16,0:26:20.98:0,21,532	0/0:9,0:14:12.04:0,12,347	1/1:6,19:24:53.62:1006,54,0	1/1:8,16:24:38.98:947,39,0	1/1:20,13:32:5.98:112,6,0	1/1:8,15:23:39.09:1126,39,0	1/1:5,13:18:24.08:738,24,0	1/1:7,8:15:3.90:94,4,0	1/1:3,12:15:27.09:826,27,0	1/1:8,17:25:51.09:1254,51,0	1/1:9,18:27:45.15:1380,45,0	1/1:1,5:6:12.04:369,12,0
chr10	29275319	.	GTTC	G	276.49	PASS	AB=0.976;AC=15;AF=0.268;AN=56;BaseQRankSum=-1.340;DP=499;FS=13.571;HRun=0;HaplotypeScore=92.8512;InbreedingCoeff=-0.4335;MQ=45.03;MQ0=19;MQRankSum=4.627;QD=1.12;ReadPosRankSum=-4.059;VQSLOD=-0.5081;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:28:35.09:35,0,224	0/0:3,0:3:5.53:0,6,26	0/0:43,0:8:0.43:0,0,50	0/0:31,0:10:2.11:0,2,78	0/1:22,0:23:34.99:35,0,151	0/0:8,0:8:0.65:0,1,47	0/1:16,0:17:42.80:43,0,164	0/1:28,0:25:28.41:28,0,361	0/1:21,0:20:69.24:69,0,90	0/0:29,0:27:4.10:0,4,417	0/0:12,0:12:25.59:0,26,180	0/1:11,0:11:17.11:17,0,105	0/1:19,0:17:9.90:10,0,207	0/0:14,0:13:7.80:0,8,196	0/1:16,0:16:9.16:9,0,121	0/0:19,0:18:32.98:0,33,343	0/1:20,0:19:47.40:70,0,47	0/1:9,11:20:15.46:15,0,82	0/0:18,0:17:30.11:0,30,325	0/1:12,0:11:40.67:41,0,110	0/1:8,0:6:17.36:17,0,52	0/0:10,0:11:0.43:0,0,154	0/1:8,0:8:2.02:2,0,51	0/1:7,0:7:14.90:15,0,37	0/0:11,0:11:5.65:0,6,95	0/0:29,0:29:13.63:0,14,370	0/0:24,0:24:36.76:0,37,316	0/1:6,0:4:11.31:11,0,55
chr10	29275665	.	T	TCTGAATGTGCTGTTGACCTTCAGTCTA	60960.42	PASS	AB=0.636;AC=55;AF=0.982;AN=56;BaseQRankSum=-3.012;DP=415;FS=1.360;HRun=0;HaplotypeScore=564.4075;InbreedingCoeff=-0.0249;MQ=49.05;MQ0=0;MQRankSum=-0.288;QD=146.89;ReadPosRankSum=2.874;VQSLOD=4.4495;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:15:28.95:1288,29,0	1/1:5,0:5:14.94:667,15,0	1/1:3,1:6:18.06:887,18,0	0/1:3,0:7:26.10:906,0,26	1/1:19,0:19:25.24:2025,25,0	1/1:24,0:24:68.42:3111,68,0	1/1:29,0:29:39.11:3758,39,0	1/1:19,0:19:54.16:3687,54,0	1/1:18,0:18:50.71:2977,51,0	1/1:19,0:19:54.85:3421,55,0	1/1:18,0:18:41.87:1804,42,0	1/1:14,0:14:38.88:2638,39,0	1/1:20,0:20:59.99:4438,60,0	1/1:18,0:18:44.94:3446,45,0	1/1:24,0:24:64.49:3465,64,0	1/1:19,0:19:48.79:2318,49,0	1/1:9,0:9:24.04:1280,24,0	1/1:7,0:7:21.07:1355,21,0	1/1:9,0:9:13.88:1367,14,0	1/1:10,0:10:30.10:2027,30,0	1/1:8,0:8:24.08:1462,24,0	1/1:14,0:14:41.85:2413,42,0	1/1:14,0:14:14.02:1220,14,0	1/1:9,0:9:18.06:817,18,0	1/1:12,0:12:35.95:2068,36,0	1/1:20,0:20:57.73:2121,58,0	1/1:25,0:23:69.50:3584,70,0	1/1:2,0:2:6.02:410,6,0
chr10	29278380	.	T	TA	1567.22	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-6.765;DP=746;FS=8.845;HRun=1;HaplotypeScore=71.8813;InbreedingCoeff=0.9999;MQ=84.76;MQ0=0;MQRankSum=-4.987;QD=37.31;ReadPosRankSum=2.785;VQSLOD=4.0400;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,39:42:99:1662,111,0	0/0:16,0:16:48.16:0,48,623	0/0:23,0:23:63.15:0,63,786	0/0:23,0:23:66.16:0,66,807	0/0:26,0:26:78.21:0,78,969	0/0:16,0:16:42.12:0,42,530	0/0:23,0:22:66.18:0,66,825	0/0:31,0:31:87.27:0,87,1103	0/0:28,0:28:78.24:0,78,999	0/0:40,0:39:99:0,117,1498	0/0:23,0:23:69.22:0,69,896	0/0:29,0:29:81.25:0,81,1036	0/0:32,0:32:93.29:0,93,1192	0/0:27,0:27:81.25:0,81,1037	0/0:24,0:24:72.23:0,72,922	0/0:27,0:27:75.24:0,75,973	0/0:24,0:24:72.22:0,72,921	0/0:22,0:22:66.16:0,66,822	0/0:14,0:14:42.12:0,42,521	0/0:22,0:22:63.20:0,63,818	0/0:47,0:47:99:0,135,1753	0/0:23,0:23:60.18:0,60,753	0/0:30,0:30:87.24:0,87,1084	0/0:34,0:34:99:0,102,1324	0/0:32,0:32:96.29:0,96,1220	0/0:21,0:20:60.19:0,60,779	0/0:28,0:28:84.21:0,84,1031	0/0:19,0:19:54.18:0,54,701
chr10	29280132	.	CCTCTCT	C	230.38	PASS	AB=0.910;AC=21;AF=0.525;AN=40;BaseQRankSum=-1.382;DP=267;FS=9.828;HRun=0;HaplotypeScore=56.4793;InbreedingCoeff=0.2091;MQ=84.90;MQ0=18;MQRankSum=0.184;QD=1.97;ReadPosRankSum=0.415;VQSLOD=0.3306;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:21,1:18:29.19:36,0,29	./.	./.	./.	./.	./.	1/1:4,0:3:0.47:1,0,0	0/0:21,0:20:4.15:0,4,13	0/1:8,0:5:8.25:45,0,8	0/0:8,0:8:0.47:0,0,1	./.	0/0:4,0:4:0.47:0,0,1	1/1:9,0:9:1.25:3,1,0	1/1:8,0:7:1.25:3,1,0	./.	0/1:11,3:14:10.91:32,0,11	0/0:12,0:12:14.60:0,15,273	0/0:8,0:7:8.92:0,9,81	1/1:6,0:7:3.01:42,3,0	0/1:4,0:4:0:0,0,0	./.	0/0:4,0:2:2.84:0,3,14	0/1:7,3:10:0:0,0,0	1/1:11,0:9:3.01:51,3,0	1/1:2,0:2:3.01:52,3,0	0/0:7,0:7:0.47:0,0,1	1/1:11,0:11:2.97:20,3,0	1/1:7,0:6:3.01:51,3,0
chr10	29280200	.	C	CATAT	82.16	PASS	AB=1.000;AC=7;AF=0.146;AN=48;BaseQRankSum=4.695;DP=207;FS=37.647;HRun=0;HaplotypeScore=49.1778;InbreedingCoeff=0.4632;MQ=42.48;MQ0=23;MQRankSum=-2.370;QD=1.83;ReadPosRankSum=-0.441;VQSLOD=0.2232;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	0/0:3,0:3:9.01:0,9,118	./.	0/1:15,0:3:0:0,0,0	0/0:7,0:7:11.84:0,12,142	0/0:5,0:3:3.01:0,3,46	0/0:6,0:5:9.01:0,9,115	0/0:21,0:19:33.95:0,34,536	1/1:7,0:5:2.80:13,3,0	0/0:6,0:6:9.02:0,9,118	0/0:8,0:8:3.01:0,3,47	0/0:6,0:6:15.05:0,15,229	0/0:12,0:10:18.01:0,18,217	0/0:5,0:5:9.01:0,9,118	0/0:4,0:4:5.99:0,6,48	0/0:7,0:7:2.96:0,3,47	1/1:12,0:14:15.66:113,16,0	1/1:7,0:5:8.96:70,9,0	./.	0/0:10,0:10:17.99:0,18,252	0/0:5,0:4:6.02:0,6,93	0/0:4,0:4:2.96:0,3,47	0/0:7,0:7:2.99:0,3,24	./.	0/0:5,0:5:8.99:0,9,95	0/0:6,0:6:9.02:0,9,123	0/0:8,0:6:2.96:0,3,46	0/0:12,0:7:6:0,6,53
chr10	29280221	.	A	ATG	52.32	PASS	AB=0.929;AC=4;AF=0.118;AN=34;BaseQRankSum=0.527;DP=113;FS=1.636;HRun=0;HaplotypeScore=24.8194;InbreedingCoeff=0.1665;MQ=38.58;MQ0=13;MQRankSum=-0.771;QD=1.38;ReadPosRankSum=-1.123;VQSLOD=1.0253;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:8:4.99:0,5,18	0/0:1,0:1:2.99:0,3,24	./.	0/1:17,0:3:0:0,0,0	./.	./.	./.	0/0:13,0:10:11.89:0,12,207	0/0:5,0:3:4.99:0,5,18	0/0:1,0:1:2.98:0,3,21	0/0:2,0:2:3:0,3,25	0/0:4,0:4:11.98:0,12,98	0/0:4,0:3:9.02:0,9,105	0/0:1,0:1:2.99:0,3,24	./.	./.	0/1:15,3:17:34.18:106,0,34	0/0:5,2:6:8.19:0,8,35	./.	0/0:2,0:2:2.97:0,3,20	1/1:3,0:2:5.22:32,5,0	./.	./.	./.	0/0:3,0:3:3:0,3,25	0/0:4,0:4:11.91:0,12,91	./.	0/0:5,0:4:8.91:0,9,64
chr10	29283030	.	T	TAC	6708.62	PASS	AB=0.683;AC=26;AF=0.464;AN=56;BaseQRankSum=-11.066;DP=663;FS=5.049;HRun=0;HaplotypeScore=97.5734;InbreedingCoeff=0.5165;MQ=64.04;MQ0=6;MQRankSum=1.556;QD=16.98;ReadPosRankSum=-0.120;VQSLOD=4.6257;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:31:20.20:0,20,162	1/1:3,9:12:18.06:276,18,0	0/0:27,0:19:1.75:0,2,31	0/0:12,0:8:5.85:0,6,48	1/1:11,12:23:2.66:471,3,0	0/0:20,0:21:26.84:0,27,259	0/0:28,0:28:18.95:0,19,501	0/1:21,7:28:12.88:232,0,13	0/0:1,0:20:51.04:0,51,249	0/1:18,11:30:32.95:331,0,33	0/1:7,14:21:3.80:371,0,4	0/0:11,0:11:24.07:0,24,271	0/0:20,0:20:33.07:0,33,361	0/0:20,0:20:42.10:0,42,460	1/1:10,19:29:23.27:786,23,0	0/1:10,11:19:9.85:297,0,10	0/0:7,0:20:34.09:0,34,168	0/0:9,0:26:33.05:0,33,176	0/1:9,5:15:18.79:140,0,19	1/1:19,21:40:31.34:715,31,0	0/1:7,11:18:24.22:209,0,24	0/0:30,0:30:65.96:0,66,715	1/1:12,16:29:23.40:367,23,0	1/1:6,13:19:26.76:413,27,0	1/1:17,16:34:8.21:563,8,0	1/1:13,18:31:19.39:624,19,0	1/1:13,17:33:17.63:684,18,0	1/1:3,7:10:15.05:230,15,0
chr10	29287482	.	TCCA	T	557.45	PASS	AB=0.909;AC=3;AF=0.054;AN=56;BaseQRankSum=4.605;DP=433;FS=3.285;HRun=0;HaplotypeScore=68.8721;InbreedingCoeff=0.3525;MQ=71.50;MQ0=2;MQRankSum=0.155;QD=13.60;ReadPosRankSum=0.990;VQSLOD=3.2979;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,17:31:45.15:632,45,0	0/0:2,0:2:6.02:0,6,110	0/0:30,0:22:23.99:0,24,276	0/0:25,0:25:7.99:0,8,359	0/0:11,0:11:21.01:0,21,278	0/0:10,0:10:12.04:0,12,241	0/0:19,0:19:27:0,27,422	0/0:18,0:18:12.03:0,12,175	0/0:11,0:14:29.79:0,30,306	0/0:11,0:11:12.03:0,12,209	0/0:5,0:5:6:0,6,84	0/0:21,0:20:48.53:0,49,790	0/0:23,1:24:11.44:0,11,928	0/0:19,1:19:0:0,0,667	0/0:25,0:25:54.16:0,54,999	0/0:14,0:14:36.08:0,36,604	0/0:6,0:6:5.96:0,6,43	0/0:10,0:10:15.01:0,15,224	0/0:13,0:13:12.91:0,13,208	0/0:8,0:8:9.02:0,9,143	0/0:31,0:31:54.17:0,54,1020	0/0:6,0:6:8.92:0,9,134	0/0:8,0:8:20.97:0,21,343	0/0:20,0:20:42.52:0,43,704	0/0:12,0:12:15.04:0,15,266	0/1:9,1:10:30.13:30,0,102	0/0:16,0:15:13.07:0,13,589	0/0:12,0:12:27.04:0,27,463
chr10	29287526	.	AT	A	1415	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.469;DP=549;FS=25.048;HRun=1;HaplotypeScore=66.6220;InbreedingCoeff=0.9929;MQ=86.56;MQ0=1;MQRankSum=-5.339;QD=32.91;ReadPosRankSum=2.859;VQSLOD=1.9443;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,120,1908	0/0:5,0:5:15.05:0,15,238	0/0:22,0:21:63.20:0,63,972	0/0:31,0:29:79.46:0,79,1164	0/0:23,0:23:66.22:0,66,1046	0/0:21,0:21:63.21:0,63,1005	0/0:20,0:20:60.20:0,60,954	0/0:21,0:20:63.21:0,63,1005	1/1:0,17:17:48.11:603,48,0	0/0:13,0:13:39.13:0,39,624	0/0:10,0:10:27.09:0,27,429	0/0:27,0:27:81.28:0,81,1295	0/0:28,0:28:78.27:0,78,1243	0/0:24,0:24:72.25:0,72,1150	0/0:18,0:18:54.18:0,54,863	0/0:15,0:15:45.14:0,45,696	1/1:0,10:10:27.05:331,27,0	1/1:0,16:16:48.16:623,48,0	0/0:17,0:17:51.16:0,51,788	0/0:9,0:9:27.08:0,27,409	0/0:40,0:40:99:0,120,1884	0/0:18,0:18:51.16:0,51,792	0/0:18,0:18:54.18:0,54,855	0/0:20,0:20:54.17:0,54,837	0/0:14,0:14:39.13:0,39,623	0/0:16,0:16:45.14:0,45,697	0/0:25,0:25:75.26:0,75,1192	0/0:9,0:9:27.09:0,27,428
chr10	29288959	.	CTT	C	1140.94	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=5.697;DP=719;FS=2.811;HRun=16;HaplotypeScore=92.5103;InbreedingCoeff=0.9128;MQ=67.44;MQ0=2;MQRankSum=-0.938;QD=11.30;ReadPosRankSum=5.783;VQSLOD=2.9035;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,32:37:76.81:645,77,0	0/0:6,0:10:26.43:0,26,287	0/0:18,0:12:13.29:0,13,141	0/0:24,0:17:0.50:0,1,36	0/0:27,0:31:28.45:0,28,514	0/0:18,1:22:18.68:0,19,378	0/0:22,1:27:18.48:0,18,687	0/0:21,1:30:26.79:0,27,497	1/1:11,10:23:25.88:196,26,0	0/0:24,1:26:24.88:0,25,516	0/0:22,0:24:52.19:0,52,526	0/0:27,0:29:71.42:0,71,796	0/0:29,0:30:77.99:0,78,824	0/0:22,0:24:60.04:0,60,660	0/0:23,1:25:38.06:0,38,717	0/0:27,0:27:57.05:0,57,644	1/1:8,14:23:34.74:260,35,0	1/1:7,10:18:25.63:199,26,0	0/0:24,1:26:10.75:0,11,431	0/0:27,0:31:64.96:0,65,714	0/0:23,0:23:53.89:0,54,576	0/0:33,0:35:65.89:0,66,710	0/0:24,1:27:51.62:0,52,532	0/0:34,0:35:84.16:0,84,994	0/0:18,1:25:32.96:0,33,482	0/0:19,0:22:37.77:0,38,378	0/0:27,1:29:52.78:0,53,821	0/0:12,0:14:34.79:0,35,373
chr10	29289644	.	C	CTGTT	852.75	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-4.073;DP=697;FS=14.543;HRun=0;HaplotypeScore=107.8500;InbreedingCoeff=0.9089;MQ=69.87;MQ0=4;MQRankSum=0.900;QD=27.51;ReadPosRankSum=0.139;VQSLOD=2.6281;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:12,19:31:39.61:948,40,0	0/0:16,0:16:42.14:0,42,675	0/0:30,0:23:6.32:0,6,288	0/0:25,0:23:26.75:0,27,384	0/0:25,0:25:48.15:0,48,749	0/0:30,0:30:66.21:0,66,1039	0/0:22,0:22:51.16:0,51,772	0/0:39,0:39:58.42:0,58,832	0/0:18,0:18:51.17:0,51,812	0/0:19,0:19:45.14:0,45,709	0/0:21,0:21:48.15:0,48,739	0/0:21,0:21:48.16:0,48,751	0/0:21,0:21:48.13:0,48,745	0/0:17,0:17:42.13:0,42,632	0/0:25,0:24:60.20:0,60,960	0/0:21,0:21:54.18:0,54,874	0/0:30,0:29:57.19:0,57,916	0/0:28,0:28:48.86:0,49,964	0/0:25,0:25:48.13:0,48,701	0/0:26,0:26:66.22:0,66,1050	0/0:30,0:30:57.15:0,57,846	0/0:20,0:20:42.12:0,42,617	0/0:30,0:30:75.24:0,75,1188	0/0:17,0:17:39.11:0,39,584	0/0:37,0:37:78.24:0,78,1203	0/0:29,0:29:66.22:0,66,1030	0/0:30,0:30:60.20:0,60,956	0/0:14,0:14:42.14:0,42,666
chr10	29290500	.	T	TGC	1066.64	PASS	AB=0.854;AC=9;AF=0.161;AN=56;BaseQRankSum=11.074;DP=871;FS=3.938;HRun=0;HaplotypeScore=147.2003;InbreedingCoeff=0.6311;MQ=61.41;MQ0=16;MQRankSum=-4.800;QD=6.50;ReadPosRankSum=0.313;VQSLOD=3.1441;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:10,33:45:7.73:477,0,8	0/0:14,0:14:41.98:0,42,408	0/0:42,0:23:55.86:0,56,558	0/0:44,0:23:56.29:0,56,533	0/0:28,0:28:71.96:0,72,715	0/0:28,0:28:64.23:0,64,647	0/0:34,0:34:89.67:0,90,986	0/0:26,0:25:63.91:0,64,604	1/1:19,0:22:23.40:165,23,0	0/0:31,0:31:78.10:0,78,829	0/0:22,0:22:47.98:0,48,478	0/0:37,0:37:98.07:0,98,1056	0/1:24,0:23:33.84:34,0,312	0/0:35,0:35:99:0,102,1204	0/0:37,0:37:91.90:0,92,981	0/0:31,0:30:78.12:0,78,981	1/1:29,0:32:30.37:248,30,0	1/1:28,0:28:23.33:288,23,0	0/0:22,0:20:54.85:0,55,542	0/0:27,0:27:71.96:0,72,782	0/0:76,0:76:99:0,180,2147	0/0:29,0:29:72.03:0,72,819	0/0:23,0:23:50.03:0,50,592	0/0:46,0:45:88.20:0,88,1277	0/0:29,0:29:72.02:0,72,782	0/0:24,0:24:68.55:0,69,621	0/0:22,0:22:32.97:0,33,692	0/1:13,0:13:11.87:12,0,355
chr10	29290534	.	T	TGTGTGTGC	2009.27	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=11.397;DP=771;FS=7.282;HRun=0;HaplotypeScore=209.7542;InbreedingCoeff=0.6014;MQ=56.61;MQ0=12;MQRankSum=-4.406;QD=11.96;ReadPosRankSum=-1.526;VQSLOD=1.8052;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:52,0:52:99:451,0,102	0/0:9,0:9:24.03:0,24,429	0/0:31,0:10:5.97:0,6,218	0/0:41,0:12:22.98:0,23,209	0/0:20,0:20:3.80:0,4,660	0/1:25,0:25:14.26:14,0,845	0/0:35,0:35:99:0,102,1437	0/0:12,0:12:32.87:0,33,384	1/1:21,1:25:29.79:311,30,0	0/0:31,0:31:87.12:0,87,1203	0/0:19,0:19:47.98:0,48,669	0/0:23,0:23:58.37:0,58,1254	0/0:25,0:24:56.09:0,56,626	0/0:41,0:41:99:0,120,2139	0/0:27,0:27:44.22:0,44,1262	0/0:28,0:27:72.02:0,72,1455	1/1:33,3:37:49.94:905,50,0	1/1:18,0:18:36.54:479,37,0	0/0:14,0:14:39.05:0,39,627	0/0:27,0:27:55.21:0,55,1092	0/0:64,0:64:99:0,120,2653	0/0:30,0:30:80.52:0,81,1361	0/0:18,0:18:48:0,48,875	0/0:39,0:38:63.12:0,63,1900	0/0:26,0:26:75.04:0,75,1328	0/0:18,0:18:48.04:0,48,601	0/0:25,0:25:72.53:0,73,1400	0/1:11,0:11:0.75:1,0,530
chr10	29291672	.	AGGT	A	1190.82	PASS	AB=0.881;AC=15;AF=0.268;AN=56;BaseQRankSum=-7.382;DP=473;FS=27.898;HRun=0;HaplotypeScore=60.3540;InbreedingCoeff=0.0637;MQ=62.28;MQ0=73;MQRankSum=0.021;QD=5.49;ReadPosRankSum=0.416;VQSLOD=0.4338;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:9,22:24:15.05:264,15,0	0/0:9,0:9:6.42:0,6,43	0/0:15,0:7:16.58:0,17,153	0/0:15,0:9:23.35:0,23,193	0/1:14,0:12:1.69:2,0,15	0/1:20,0:20:6.17:32,0,6	0/0:23,0:17:5.49:0,5,24	1/1:4,0:7:17.66:229,18,0	1/1:3,0:10:4.72:142,5,0	0/1:16,0:13:94.96:190,0,95	0/0:10,0:9:2.98:0,3,21	0/0:21,0:20:11.89:0,12,90	0/0:12,0:12:11.69:0,12,96	0/0:16,0:16:5.71:0,6,46	0/0:18,0:17:2.72:0,3,22	0/0:23,0:19:17.57:0,18,136	0/1:3,0:12:9.21:96,0,9	0/1:7,8:11:17.14:95,0,17	0/1:5,0:5:29.63:64,0,30	0/0:9,0:8:2.98:0,3,22	0/0:25,0:21:8.87:0,9,61	0/0:7,0:6:8.97:0,9,75	0/1:15,0:14:17.18:32,0,17	0/0:24,0:20:2.99:0,3,23	0/1:21,0:17:24.30:24,0,36	0/1:24,0:18:80.16:176,0,80	0/0:14,0:12:8.35:0,8,53	0/0:8,0:8:6.01:0,6,55
chr10	29291673	.	G	GTGTGT	5795.39	PASS	AB=0.789;AC=46;AF=0.821;AN=56;BaseQRankSum=-5.703;DP=569;FS=8.979;HRun=0;HaplotypeScore=98.8276;InbreedingCoeff=0.3541;MQ=58.93;MQ0=74;MQRankSum=-2.402;QD=11.45;ReadPosRankSum=-0.676;VQSLOD=3.2106;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:25:13.36:0,13,104	1/1:1,0:10:6.01:122,6,0	0/0:15,0:7:16.84:0,17,158	0/0:15,0:9:23.35:0,23,193	1/1:4,0:15:2.98:74,3,0	1/1:6,17:27:3.01:38,3,0	0/1:2,17:20:0:0,0,0	1/1:17,0:14:40.19:585,40,0	0/1:17,0:11:24.56:135,0,25	1/1:5,0:17:44.88:705,45,0	1/1:3,0:11:3.01:74,3,0	1/1:8,14:28:11.43:398,11,0	1/1:3,0:14:11.77:281,12,0	1/1:5,14:21:6.02:141,6,0	1/1:2,15:19:3.01:100,3,0	1/1:3,0:23:18.06:421,18,0	0/1:17,0:13:79.23:141,0,79	0/1:13,0:11:7.21:7,0,33	1/1:4,0:8:15.52:246,16,0	1/1:4,0:11:3.01:42,3,0	1/1:4,0:23:9.03:233,9,0	1/1:2,0:7:9.03:208,9,0	1/1:3,10:17:5.05:136,5,0	1/1:3,22:27:2.74:100,3,0	1/1:8,16:25:8.60:231,9,0	1/1:7,0:24:49.02:835,49,0	1/1:4,11:17:12.04:325,12,0	1/1:5,0:12:9.03:219,9,0
chr10	29292394	.	C	CACACAA	74.27	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.689;DP=692;FS=4.441;HRun=0;HaplotypeScore=156.2635;InbreedingCoeff=0.9500;MQ=60.21;MQ0=16;MQRankSum=-4.512;QD=1.90;ReadPosRankSum=-3.232;VQSLOD=1.9442;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:8,23:38:11.78:160,12,0	0/0:5,0:5:15:0,15,200	0/0:52,0:22:61.82:0,62,616	0/0:56,0:21:38.17:0,38,370	0/0:12,0:12:29.98:0,30,369	0/0:22,0:22:63.03:0,63,961	0/0:26,0:26:60.52:0,61,907	0/0:16,0:16:38.20:0,38,336	0/0:21,0:21:59.97:0,60,872	0/0:26,0:26:63.02:0,63,756	0/0:15,0:15:38.96:0,39,395	0/0:26,0:26:65.81:0,66,852	0/0:19,0:19:41.99:0,42,708	0/0:23,0:23:59.88:0,60,863	0/0:17,0:17:51:0,51,716	0/0:18,0:18:47.91:0,48,761	0/0:40,0:40:90.89:0,91,1333	0/0:14,0:14:42.04:0,42,678	0/0:14,0:14:38.85:0,39,408	0/0:18,0:18:44.87:0,45,543	0/0:47,0:46:99:0,111,1369	0/0:28,0:28:40.06:0,40,765	0/0:25,0:25:56.75:0,57,720	0/0:32,0:32:77.94:0,78,1233	0/0:17,0:17:42.02:0,42,571	0/0:21,0:21:38.89:0,39,570	0/0:26,0:26:62.40:0,62,667	0/0:16,0:16:37.95:0,38,667
chr10	29294834	.	A	AT	2417.59	PASS	AB=0.900;AC=9;AF=0.161;AN=56;BaseQRankSum=-11.106;DP=624;FS=5.805;HRun=7;HaplotypeScore=59.0994;InbreedingCoeff=0.8723;MQ=76.62;MQ0=0;MQRankSum=-1.396;QD=24.92;ReadPosRankSum=0.406;VQSLOD=4.1931;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,18:20:54.17:652,54,0	0/0:10,0:10:30.05:0,30,290	0/0:12,0:12:22.58:0,23,206	0/0:18,0:17:10.91:0,11,227	0/0:23,0:23:66.11:0,66,637	0/0:32,0:31:90.14:0,90,869	0/0:20,0:20:60.10:0,60,579	0/0:31,0:31:75.09:0,75,716	1/1:2,16:18:45.14:544,45,0	0/0:35,0:35:96.12:0,96,916	0/0:28,0:28:75.10:0,75,719	0/0:16,0:16:42.07:0,42,406	0/0:26,0:26:72.12:0,72,695	0/0:21,0:21:57.06:0,57,539	0/0:20,0:20:60.07:0,60,570	0/0:25,0:25:66.10:0,66,637	1/1:1,24:25:69.21:834,69,0	1/1:0,16:16:45.14:544,45,0	0/1:16,2:18:7.95:8,0,380	0/0:36,0:36:99:0,102,985	0/0:13,0:13:39.04:0,39,370	0/0:22,0:22:66.09:0,66,632	0/0:34,0:34:87.11:0,87,835	0/0:9,0:9:26.99:0,27,251	0/0:24,0:24:66.09:0,66,633	0/0:26,0:26:78.13:0,78,753	0/0:40,0:40:99:0,105,1009	0/0:6,0:6:18.03:0,18,174
chr10	29299161	.	GA	G	1423.17	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=9.392;DP=600;FS=0.000;HRun=10;HaplotypeScore=60.9893;InbreedingCoeff=0.8937;MQ=67.89;MQ0=0;MQRankSum=-0.827;QD=18.25;ReadPosRankSum=1.690;VQSLOD=4.3464;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,23:25:59.99:521,60,0	0/0:14,0:14:36.08:0,36,389	0/0:17,0:16:2.27:0,2,200	0/0:14,1:12:32.63:0,33,322	0/0:28,1:29:46.14:0,46,735	0/0:28,0:28:81.22:0,81,896	0/0:12,0:12:30.08:0,30,332	0/0:25,0:25:60.14:0,60,649	1/1:1,10:11:23.99:208,24,0	0/0:31,0:31:81.20:0,81,883	0/0:23,0:23:66.17:0,66,721	0/0:20,2:22:2.02:0,2,472	0/0:22,1:23:25.06:0,25,490	0/0:15,0:15:39.09:0,39,423	0/0:28,2:30:51.99:0,52,785	0/0:23,0:24:66.01:0,66,711	1/1:3,21:24:26.81:462,27,0	1/1:2,16:18:44.99:391,45,0	0/0:23,0:23:57.08:0,57,605	0/0:34,2:36:47.10:0,47,962	0/0:7,0:7:18.05:0,18,199	0/0:22,0:23:56.99:0,57,612	0/0:26,0:28:77.87:0,78,819	0/0:10,0:10:27.07:0,27,299	0/0:23,0:23:59.89:0,60,635	0/0:23,0:23:58.40:0,58,634	0/0:30,0:30:84.16:0,84,885	0/0:11,0:11:33.09:0,33,365
chr10	29299671	.	TGAGAGA	T	91.04	PASS	AB=0.866;AC=6;AF=0.150;AN=40;BaseQRankSum=3.659;DP=364;FS=4.095;HRun=0;HaplotypeScore=78.6892;InbreedingCoeff=0.0477;MQ=64.34;MQ0=4;MQRankSum=-0.027;QD=1.60;ReadPosRankSum=-0.407;VQSLOD=0.9834;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:2.98:0,3,22	0/0:2,0:2:0.47:0,0,1	./.	0/0:24,0:14:0.94:0,1,2	./.	0/0:12,0:15:2.07:0,2,18	1/1:7,0:7:0.88:2,1,0	./.	0/0:8,0:8:6.01:0,6,90	0/0:11,0:11:11.94:0,12,96	./.	0/1:9,2:11:10.10:111,0,10	0/0:11,0:14:5.08:0,5,41	0/0:11,0:14:0.36:0,0,18	./.	0/0:9,0:9:5.97:0,6,45	0/0:15,0:15:9.50:0,10,219	0/0:15,0:15:16.61:0,17,373	0/0:14,0:14:2.99:0,3,24	./.	0/0:13,0:12:5.20:0,5,46	0/0:7,0:7:9.02:0,9,175	0/1:14,3:18:0:0,0,0	./.	./.	0/0:15,0:14:3:0,3,28	0/1:9,3:12:16.95:54,0,17	0/1:9,0:9:12.99:13,0,18
chr10	29300219	.	AC	A	889.72	PASS	AB=0.862;AC=8;AF=0.143;AN=56;BaseQRankSum=8.692;DP=1132;FS=1.788;HRun=2;HaplotypeScore=129.8560;InbreedingCoeff=0.1639;MQ=44.42;MQ0=134;MQRankSum=-5.934;QD=3.24;ReadPosRankSum=-2.572;VQSLOD=-0.5839;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:34,6:29:9.75:258,0,10	0/0:25,3:26:27.02:0,27,836	0/1:44,1:5:5.88:6,0,122	0/0:49,0:12:23.02:0,23,202	0/0:25,0:24:55.23:0,55,736	0/0:35,1:33:79.81:0,80,1261	0/0:57,2:47:99:0,106,1392	0/1:72,6:40:52.73:53,0,1000	1/1:19,9:17:24.67:290,25,0	0/0:46,1:39:41.10:0,41,1116	0/0:25,0:25:66.34:0,66,1001	0/0:40,1:35:66.18:0,66,937	0/0:32,0:24:56.80:0,57,730	0/0:31,0:25:20.55:0,21,748	0/0:32,2:28:53.29:0,53,854	0/0:41,1:32:78.97:0,79,1065	0/1:13,7:11:93.23:93,0,120	0/1:10,11:17:87.56:319,0,88	0/1:43,0:11:8.68:9,0,269	0/0:27,0:25:69.22:0,69,965	0/0:123,5:88:99:0,124,1607	0/0:39,1:33:78.71:0,79,1090	0/0:30,1:26:43.49:0,43,852	0/0:51,0:41:87.54:0,88,1231	0/0:42,0:38:92.90:0,93,1165	0/0:51,0:41:62.94:0,63,1201	0/0:11,1:10:19.27:0,19,334	0/0:25,0:22:55.84:0,56,861
chr10	29300244	.	AAC	A	341.63	PASS	AB=0.927;AC=6;AF=0.111;AN=54;BaseQRankSum=7.389;DP=1146;FS=0.000;HRun=0;HaplotypeScore=156.7669;InbreedingCoeff=0.4560;MQ=40.66;MQ0=138;MQRankSum=-4.707;QD=3.22;ReadPosRankSum=-1.452;VQSLOD=2.4426;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:35,5:28:22.48:202,22,0	0/0:23,0:21:39.13:0,39,646	./.	0/0:53,0:1:3.01:0,3,42	0/0:32,0:27:51.51:0,52,766	0/0:31,0:30:67.45:0,67,1048	0/0:62,0:47:81.20:0,81,1244	0/0:108,0:56:59.38:0,59,1026	1/1:22,7:19:0.68:137,1,0	0/0:48,0:37:57.30:0,57,1126	0/0:22,0:21:29.82:0,30,600	0/0:42,0:36:32.50:0,32,993	0/0:29,0:21:43.53:0,44,561	0/0:43,0:34:77.13:0,77,1065	0/0:31,0:23:42.54:0,43,670	0/0:32,0:26:54.14:0,54,836	0/1:21,2:15:56.58:57,0,61	0/1:13,1:12:6.96:67,0,7	0/0:41,0:11:24.06:0,24,353	0/0:22,0:19:0.34:0,0,546	0/0:141,0:102:99:0,147,1986	0/0:29,0:26:51.15:0,51,822	0/0:30,0:25:47.96:0,48,677	0/0:50,0:44:75.67:0,76,1188	0/0:37,0:33:80.53:0,81,1208	0/0:45,0:36:72.70:0,73,1053	0/0:20,0:18:29.17:0,29,568	0/0:17,0:15:30.44:0,30,385
chr10	29300425	.	A	AC	1704.26	PASS	AB=0.754;AC=6;AF=0.111;AN=54;BaseQRankSum=8.839;DP=1178;FS=1.789;HRun=1;HaplotypeScore=142.7948;InbreedingCoeff=0.5684;MQ=41.09;MQ0=226;MQRankSum=0.291;QD=14.44;ReadPosRankSum=3.265;VQSLOD=3.6607;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,1:40:56.74:0,57,1086	0/0:11,0:7:18.06:0,18,233	./.	0/0:16,0:1:3.01:0,3,33	0/0:40,0:30:60.19:0,60,772	0/0:35,0:26:53.88:0,54,686	0/0:83,0:58:84.46:0,84,1191	0/0:84,0:41:86.93:0,87,1050	1/1:19,5:10:17.82:223,18,0	0/0:65,0:37:89.74:0,90,1081	0/0:29,0:24:53.68:0,54,701	0/0:35,0:27:58.41:0,58,756	0/0:29,0:20:45.14:0,45,583	0/0:41,0:33:75.68:0,76,951	0/0:36,0:22:27.06:0,27,510	0/0:31,0:24:49.25:0,49,638	1/1:14,20:27:7.02:572,7,0	0/1:14,34:40:32.36:1027,0,32	0/0:67,0:24:61.82:0,62,750	0/0:20,0:12:30.08:0,30,375	0/0:151,0:119:99:0,197,2470	0/0:29,1:20:48.15:0,48,617	0/0:32,0:25:57.66:0,58,740	0/0:64,0:54:99:0,135,1720	0/0:22,0:15:27.09:0,27,351	0/0:64,0:37:90.17:0,90,1124	0/0:19,0:16:42.14:0,42,545	0/1:11,0:10:4.46:4,0,283
chr10	29303568	.	AG	A	14560.93	PASS	AB=1.000;AC=47;AF=0.839;AN=56;BaseQRankSum=0.918;DP=652;FS=11.739;HRun=3;HaplotypeScore=80.2744;InbreedingCoeff=0.6267;MQ=85.93;MQ0=1;MQRankSum=-7.275;QD=26.62;ReadPosRankSum=4.778;VQSLOD=3.2534;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:94.07:0,94,1321	1/1:2,9:11:27.08:334,27,0	0/0:38,0:30:41.03:0,41,549	0/0:31,1:25:56.52:0,57,464	1/1:0,31:31:90.09:1035,90,0	1/1:0,25:25:60.19:741,60,0	1/1:1,22:23:54.17:667,54,0	1/1:1,26:27:72.19:844,72,0	0/1:23,0:23:9.29:9,0,69	1/1:0,28:28:81.14:923,81,0	1/1:0,19:19:56.92:613,57,0	1/1:0,22:22:60.19:741,60,0	1/1:1,21:22:51.16:630,51,0	1/1:0,18:18:51.16:629,51,0	1/1:1,26:27:60.19:742,60,0	1/1:0,21:21:48.15:593,48,0	0/1:37,0:37:14.26:36,0,14	0/1:19,0:19:13.54:19,0,14	1/1:3,22:25:63.06:674,63,0	1/1:0,16:16:44.97:498,45,0	1/1:1,18:19:48.15:593,48,0	1/1:2,17:19:52.98:635,53,0	1/1:0,12:12:29.99:349,30,0	1/1:0,25:25:69.22:852,69,0	1/1:0,17:17:42.13:518,42,0	1/1:2,22:24:66.14:755,66,0	1/1:2,29:31:78.21:947,78,0	1/1:0,6:6:15.05:185,15,0
chr10	29303571	.	GA	G	5404.94	PASS	AB=0.988;AC=48;AF=0.857;AN=56;BaseQRankSum=6.493;DP=650;FS=6.734;HRun=9;HaplotypeScore=111.6234;InbreedingCoeff=0.3806;MQ=87.10;MQ0=1;MQRankSum=-4.567;QD=9.29;ReadPosRankSum=6.880;VQSLOD=2.6190;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,1:34:71.83:0,72,1071	1/1:10,0:10:2.49:76,2,0	0/1:36,2:30:22.41:22,0,263	0/0:33,1:27:43.16:0,43,423	1/1:31,0:31:71.17:313,71,0	1/1:26,0:26:32.93:213,33,0	1/1:22,0:22:47.82:196,48,0	1/1:27,0:27:35.68:181,36,0	1/1:4,18:22:48.01:439,48,0	1/1:28,0:28:50.65:176,51,0	0/1:22,0:22:27.98:132,0,28	1/1:22,0:22:53.17:220,53,0	1/1:21,0:21:45.59:191,46,0	1/1:19,0:19:24.20:178,24,0	1/1:27,0:27:30.86:184,31,0	1/1:22,0:22:20.49:144,20,0	1/1:2,32:34:93.05:851,93,0	1/1:2,16:18:42.02:384,42,0	0/1:25,0:25:14.10:101,0,14	0/1:17,0:17:8.05:117,0,8	1/1:18,0:18:42.71:177,43,0	1/1:18,0:18:26.33:155,26,0	1/1:12,0:12:24.15:102,24,0	1/1:25,0:25:61.63:258,62,0	1/1:17,0:17:36.28:142,36,0	1/1:22,0:22:41.04:159,41,0	1/1:33,0:33:5.92:233,6,0	1/1:6,0:6:13.47:59,13,0
chr10	29304090	.	GT	G	5865.82	PASS	AB=0.794;AC=44;AF=0.786;AN=56;BaseQRankSum=-2.437;DP=603;FS=1.398;HRun=13;HaplotypeScore=88.1904;InbreedingCoeff=0.5831;MQ=73.36;MQ0=3;MQRankSum=-0.388;QD=12.17;ReadPosRankSum=1.335;VQSLOD=4.9278;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,2:33:29.38:0,29,555	1/1:3,9:13:25.88:181,26,0	0/1:18,1:15:12.56:13,0,63	0/1:15,0:11:6.83:7,0,93	1/1:10,17:29:24.47:311,24,0	1/1:7,20:26:50.64:370,51,0	1/1:2,14:16:32.74:240,33,0	1/1:13,12:25:29.74:219,30,0	0/0:4,0:18:30.54:0,31,185	1/1:10,16:27:49.66:352,50,0	1/1:6,16:24:54.75:381,55,0	1/1:4,12:16:9.57:233,10,0	1/1:0,12:14:36.88:252,37,0	1/1:3,12:15:20.85:153,21,0	1/1:3,10:13:23.85:175,24,0	0/1:6,16:23:17.77:256,0,18	0/0:5,0:28:50.30:0,50,276	0/0:8,1:42:66.26:0,66,385	0/1:6,7:14:0.34:151,0,0	1/1:4,22:27:26.35:342,26,0	1/1:4,11:15:20.63:152,21,0	1/1:6,18:24:22.15:321,22,0	1/1:4,19:24:3.46:341,3,0	1/1:9,13:23:20.02:252,20,0	1/1:1,16:18:43.79:312,44,0	1/1:6,17:23:50.01:368,50,0	1/1:5,18:24:8.66:309,9,0	1/1:3,9:12:6.37:173,6,0
chr10	29305160	.	T	TA	7362.25	PASS	AB=0.743;AC=43;AF=0.796;AN=54;BaseQRankSum=-6.475;DP=570;FS=15.376;HRun=11;HaplotypeScore=70.0892;InbreedingCoeff=0.6475;MQ=69.22;MQ0=0;MQRankSum=1.460;QD=15.31;ReadPosRankSum=-1.770;VQSLOD=3.4900;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:31:58.69:0,59,447	1/1:2,4:6:9.02:91,9,0	0/1:10,0:10:8.16:8,0,34	./.	1/1:9,16:25:4.47:375,4,0	0/1:5,8:13:4.21:134,0,4	1/1:2,18:20:36.07:366,36,0	1/1:7,26:33:16.58:499,17,0	0/0:20,0:20:38.75:0,39,302	0/1:9,16:25:7.33:281,0,7	1/1:6,11:17:9.72:250,10,0	1/1:5,14:20:15.29:326,15,0	1/1:6,19:25:27:263,27,0	1/1:2,12:14:27.05:274,27,0	1/1:4,28:32:60.12:609,60,0	1/1:8,14:24:15.51:310,16,0	0/0:21,0:21:53.70:0,54,409	0/0:14,0:14:32.86:0,33,255	1/1:6,17:24:30.68:464,31,0	1/1:4,17:21:41.90:375,42,0	1/1:2,10:12:18.04:183,18,0	1/1:6,16:22:22.19:370,22,0	1/1:6,14:20:41.91:383,42,0	1/1:3,26:29:41.80:560,42,0	1/1:4,22:26:12.48:311,12,0	1/1:9,13:22:26.94:239,27,0	1/1:8,30:37:60.08:599,60,0	1/1:0,3:3:9.02:91,9,0
chr10	29305591	.	ACCTTCCTTCCTTCCTTCCTT	A	5129.15	PASS	AB=0.992;AC=26;AF=0.464;AN=56;BaseQRankSum=-4.258;DP=447;FS=2.422;HRun=0;HaplotypeScore=251.0916;InbreedingCoeff=-0.0908;MQ=75.63;MQ0=5;MQRankSum=1.112;QD=17.93;ReadPosRankSum=2.583;VQSLOD=3.1445;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:63.19:0,63,2972	1/1:2,0:2:3.01:53,3,0	0/0:29,0:23:11.99:0,12,266	0/0:20,0:17:14.73:0,15,206	0/1:10,0:10:47.74:48,0,145	0/1:18,0:18:32.93:520,0,33	1/1:7,0:7:15.03:218,15,0	1/1:18,9:26:9.04:287,9,0	0/0:22,0:22:42.14:0,42,2140	0/1:13,0:13:52.23:229,0,52	0/0:3,6:9:3.01:0,3,105	0/1:15,0:15:99:334,0,258	0/1:10,0:10:98.51:155,0,99	0/1:18,0:18:37.29:390,0,37	1/1:17,0:17:13.26:482,13,0	0/1:22,0:22:12.44:446,0,12	0/0:22,0:21:33.11:0,33,1382	0/0:11,0:11:27.09:0,27,896	0/1:15,2:15:11.61:19,0,12	0/1:19,0:19:27.94:228,0,28	1/1:19,0:19:12.49:277,12,0	0/1:12,0:12:54.94:218,0,55	0/0:9,4:13:8.82:0,9,61	1/1:11,0:11:5.51:60,6,0	0/1:12,0:12:65:274,0,65	0/1:10,0:10:31.57:194,0,32	0/1:17,0:17:84.52:491,0,85	0/1:10,0:10:16.79:207,0,17
chr10	29305613	.	CT	C	1336.17	PASS	AB=0.859;AC=22;AF=0.393;AN=56;BaseQRankSum=3.060;DP=356;FS=10.127;HRun=2;HaplotypeScore=101.3072;InbreedingCoeff=-0.3955;MQ=44.76;MQ0=14;MQRankSum=-2.240;QD=5.69;ReadPosRankSum=1.880;VQSLOD=-0.0559;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:32:63.20:0,63,902	0/1:3,0:3:20.48:20,0,39	0/0:13,0:5:12.04:0,12,175	0/0:14,0:5:15.04:0,15,201	0/1:7,3:9:18.18:18,0,150	0/1:10,3:13:37.80:118,0,38	0/1:9,1:9:66.35:66,0,75	0/1:14,0:11:46:46,0,92	0/0:16,0:16:42.14:0,42,615	0/1:13,2:14:65.10:65,0,172	0/0:7,1:8:6.02:0,6,85	0/1:9,4:13:84.16:84,0,154	0/1:7,3:10:39.12:77,0,39	0/1:13,3:16:54.56:119,0,55	0/1:10,2:12:37.47:61,0,37	0/1:13,2:15:47.10:120,0,47	0/0:18,0:17:45.15:0,45,658	0/0:9,0:9:27.09:0,27,400	0/1:6,1:3:12.57:15,0,13	0/1:9,3:12:23.58:80,0,24	0/1:17,0:17:27.04:27,0,94	1/1:5,2:7:20.62:140,21,0	0/1:10,4:14:53.65:54,0,135	0/0:9,0:10:4.77:0,5,85	0/1:10,4:14:99:99,0,121	0/1:7,2:9:53.70:54,0,68	1/1:7,5:12:4.22:123,4,0	0/1:11,1:12:97.72:114,0,98
chr10	29305616	.	CCTTCCTT	C	2336.70	PASS	AB=0.816;AC=17;AF=0.304;AN=56;BaseQRankSum=10.206;DP=350;FS=3.346;HRun=0;HaplotypeScore=130.4823;InbreedingCoeff=-0.4320;MQ=43.93;MQ0=15;MQRankSum=-7.165;QD=11.92;ReadPosRankSum=8.795;VQSLOD=1.5335;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:30:57.19:0,57,1733	0/0:3,0:3:8.64:0,9,63	0/0:12,0:4:9.01:0,9,156	0/0:16,0:6:15.04:0,15,205	0/1:7,3:9:71.08:88,0,71	0/1:9,3:12:30.81:181,0,31	0/1:9,1:9:32.08:32,0,98	0/0:14,0:11:23.34:0,23,162	0/0:17,0:17:45.15:0,45,1177	0/1:13,2:14:99:107,0,108	0/0:7,1:8:5.77:0,6,33	0/1:9,4:13:99:118,0,129	0/1:8,3:11:4.26:301,0,4	0/1:12,3:15:88.10:161,0,88	0/1:9,2:11:34.12:164,0,34	0/1:13,2:15:52.37:178,0,52	0/0:17,0:16:45.15:0,45,978	0/0:10,0:10:30.10:0,30,651	0/1:6,1:3:41.80:48,0,42	0/1:6,3:9:31.81:159,0,32	0/0:17,0:17:28.56:0,29,174	0/1:4,2:6:23.49:130,0,23	0/1:10,4:14:70.73:193,0,71	0/0:9,0:9:1.72:0,2,51	0/1:10,4:14:46.80:175,0,47	0/1:8,2:10:38.46:106,0,38	0/1:7,5:12:17.08:301,0,17	0/1:11,1:11:51.30:51,0,74
chr10	29305631	.	T	TCCTC	2478.88	PASS	AB=1.000;AC=44;AF=0.786;AN=56;BaseQRankSum=-6.959;DP=336;FS=5.883;HRun=0;HaplotypeScore=110.1697;InbreedingCoeff=0.0665;MQ=41.56;MQ0=12;MQRankSum=5.967;QD=8.18;ReadPosRankSum=-5.252;VQSLOD=0.2564;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:10,17:27:21.05:455,21,0	1/1:3,0:3:5.91:38,6,0	0/0:15,0:6:9:0,9,79	0/0:18,0:5:11.87:0,12,90	1/1:12,0:9:3.96:69,4,0	0/1:8,0:8:5.01:33,0,5	1/1:9,0:8:20.30:156,20,0	1/1:16,0:12:1.08:27,1,0	1/1:15,0:15:26.58:207,27,0	0/1:13,0:11:3.73:95,0,4	1/1:9,0:9:8.91:64,9,0	1/1:9,0:9:3.80:65,4,0	0/1:17,0:17:6.40:109,0,6	1/1:15,0:15:4.69:129,5,0	1/1:10,0:10:4.98:85,5,0	1/1:14,0:14:14.44:144,14,0	1/1:17,0:16:7.02:149,7,0	1/1:9,0:9:7.22:50,7,0	0/1:9,0:5:0.91:23,0,1	0/1:10,0:10:5.21:55,0,5	1/1:9,0:9:11.90:86,12,0	0/1:7,0:7:2.38:73,0,2	0/1:14,0:14:13.99:74,0,14	1/1:11,0:11:13.83:115,14,0	1/1:11,0:11:1.77:77,2,0	1/1:9,0:9:3.94:90,4,0	0/1:9,0:9:15.53:16,0,16	1/1:11,0:9:13.52:135,14,0
chr10	29305741	.	T	TCCC	9145.05	PASS	AB=0.573;AC=42;AF=0.750;AN=56;BaseQRankSum=-7.111;DP=471;FS=9.432;HRun=7;HaplotypeScore=75.8152;InbreedingCoeff=0.7929;MQ=90.10;MQ0=1;MQRankSum=-5.576;QD=28.85;ReadPosRankSum=-0.308;VQSLOD=2.1226;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:81.26:0,81,1103	1/1:0,3:3:3.01:62,3,0	0/0:31,0:28:59.81:0,60,736	0/0:47,0:43:73.03:0,73,896	1/1:5,12:18:20.86:411,21,0	1/1:1,8:11:21.05:396,21,0	1/1:2,12:13:33.11:684,33,0	0/1:3,5:8:2.78:181,0,3	0/0:17,0:17:45.14:0,45,597	1/1:8,15:23:39.01:648,39,0	1/1:2,12:15:21.05:387,21,0	1/1:1,12:15:18.04:334,18,0	1/1:1,13:15:15.03:272,15,0	1/1:2,9:12:18.06:373,18,0	1/1:1,10:11:18.06:351,18,0	0/1:2,15:17:7.83:565,0,8	0/0:19,0:19:51.15:0,51,695	0/0:11,0:11:30.09:0,30,408	1/1:5,6:12:27.03:440,27,0	1/1:9,9:19:21.07:397,21,0	1/1:8,15:27:29.99:502,30,0	1/1:4,14:18:33.54:618,34,0	1/1:2,5:7:15.05:287,15,0	1/1:2,21:25:33.05:607,33,0	1/1:5,13:18:30.57:598,31,0	1/1:3,9:13:27.03:405,27,0	1/1:1,11:14:30.06:527,30,0	1/1:2,0:2:6.02:102,6,0
chr10	29306835	.	A	ATT	16271.26	PASS	AB=1.000;AC=45;AF=0.804;AN=56;BaseQRankSum=-2.175;DP=557;FS=6.327;HRun=7;HaplotypeScore=73.8969;InbreedingCoeff=0.8740;MQ=71.66;MQ0=0;MQRankSum=0.285;QD=36.00;ReadPosRankSum=-1.191;VQSLOD=4.3084;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,102,1172	1/1:0,7:7:21.03:312,21,0	0/0:14,0:9:8.73:0,9,52	0/1:12,0:8:10.89:11,0,54	1/1:3,21:24:60.20:964,60,0	1/1:3,19:23:51.17:822,51,0	1/1:1,23:26:57.19:905,57,0	1/1:3,25:30:78.24:1197,78,0	0/0:20,0:20:54.14:0,54,616	1/1:3,15:19:48.14:752,48,0	1/1:3,18:21:54.10:807,54,0	1/1:5,19:24:53.96:874,54,0	1/1:3,11:14:24.08:390,24,0	1/1:3,17:20:45.15:730,45,0	1/1:3,22:25:54.18:876,54,0	1/1:2,18:20:48.16:779,48,0	0/0:22,0:22:57.15:0,57,664	0/0:14,0:14:36.10:0,36,418	1/1:3,22:25:63.21:1013,63,0	1/1:1,27:29:84.13:1255,84,0	1/1:0,7:7:15.05:244,15,0	1/1:0,14:14:42.06:624,42,0	1/1:2,15:17:36.12:585,36,0	1/1:3,20:24:51.17:828,51,0	1/1:1,15:16:36.02:582,36,0	1/1:5,15:20:45.14:701,45,0	1/1:1,22:25:48.16:779,48,0	1/1:0,8:10:15.05:243,15,0
chr10	29307513	.	A	AAC	1043.05	PASS	AB=0.857;AC=33;AF=0.635;AN=52;BaseQRankSum=-3.086;DP=630;FS=3.089;HRun=0;HaplotypeScore=99.0530;InbreedingCoeff=-0.2652;MQ=60.35;MQ0=21;MQRankSum=0.613;QD=2.16;ReadPosRankSum=-0.270;VQSLOD=1.9643;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:26,12:41:35.18:35,0,39	1/1:1,2:3:3.01:44,3,0	./.	./.	1/1:10,0:10:5.88:41,6,0	0/1:19,8:28:18.29:114,0,18	0/1:8,5:12:18.19:38,0,18	1/1:21,0:21:2.97:20,3,0	0/0:13,0:26:22.63:0,23,109	0/1:16,1:16:20.25:20,0,26	1/1:13,0:12:2.85:16,3,0	0/1:17,3:22:32.12:32,0,67	1/1:10,6:19:6.02:77,6,0	1/1:14,6:21:5.79:88,6,0	0/1:28,4:34:7.86:79,0,8	1/1:15,1:16:7.96:95,8,0	0/0:16,0:24:5.68:0,6,28	0/0:13,0:15:2.84:0,3,14	0/1:17,0:16:17.27:17,0,29	0/1:9,1:12:15.15:15,0,37	0/1:36,11:45:26.14:26,0,135	0/1:14,0:14:23.18:37,0,23	0/1:8,0:8:8.24:8,0,27	0/1:28,11:41:25.18:159,0,25	1/1:17,8:26:0.39:160,0,0	1/1:20,0:20:0.94:2,1,0	0/1:23,1:29:19.43:19,0,35	1/1:9,0:9:3.44:45,3,0
chr10	29307933	.	C	CACACTACTATTGAGTT	55856.05	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-2.992;DP=752;FS=0.500;HRun=0;HaplotypeScore=294.5409;InbreedingCoeff=0.9042;MQ=70.23;MQ0=0;MQRankSum=-12.181;QD=85.15;ReadPosRankSum=0.774;VQSLOD=4.1935;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,102,3853	1/1:6,3:9:9.03:532,9,0	0/0:23,0:23:37.39:0,37,1126	0/0:31,0:31:54.15:0,54,1780	1/1:24,5:29:18.06:1099,18,0	1/1:15,10:27:39.13:2689,39,0	1/1:17,6:23:36.12:2153,36,0	1/1:44,0:44:54.14:2392,54,0	1/1:16,10:28:36.12:2396,36,0	1/1:18,9:28:60.19:3936,60,0	1/1:12,2:13:9.03:226,9,0	1/1:19,7:27:36.12:2337,36,0	1/1:25,18:46:63.22:4164,63,0	1/1:10,9:20:30.10:2145,30,0	1/1:19,17:36:54.19:3977,54,0	1/1:22,11:35:60.21:3677,60,0	1/1:14,5:20:27.09:1755,27,0	1/1:6,0:6:12.01:210,12,0	1/1:19,4:25:42.14:1789,42,0	1/1:14,9:23:39.13:2233,39,0	1/1:29,6:35:48.08:2424,48,0	1/1:25,5:31:42.10:1780,42,0	1/1:18,1:19:15.05:849,15,0	1/1:15,2:18:8.99:468,9,0	1/1:23,12:38:69.24:4288,69,0	1/1:23,10:33:51.15:3345,51,0	1/1:20,15:36:66.18:4306,66,0	1/1:3,3:6:9.03:688,9,0
chr10	29308878	.	GCCAAAGCCTTCTCT	G	35910.35	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=15.985;DP=741;FS=5.365;HRun=0;HaplotypeScore=291.2202;InbreedingCoeff=0.9486;MQ=86.15;MQ0=2;MQRankSum=-15.726;QD=63.11;ReadPosRankSum=0.832;VQSLOD=3.4761;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,105,6872	1/1:1,10:11:15.05:540,15,0	0/0:28,0:28:59.59:0,60,3570	0/0:35,0:36:90.19:0,90,4363	1/1:2,38:40:60.20:1884,60,0	1/1:1,19:20:48.16:1830,48,0	1/1:3,27:29:45.15:1805,45,0	1/1:5,26:31:74.91:1739,75,0	0/0:35,0:35:99:0,102,6746	1/1:3,17:20:42.14:1651,42,0	1/1:1,22:23:42.14:722,42,0	1/1:3,27:30:66.23:2664,66,0	1/1:1,31:33:66.23:2659,66,0	1/1:2,36:38:72.25:2869,72,0	1/1:1,38:39:78.27:3007,78,0	1/1:5,34:39:78.27:3226,78,0	0/0:25,0:25:63.19:0,63,4028	0/0:13,0:13:36.12:0,36,2200	1/1:3,19:22:57:1515,57,0	1/1:3,29:32:54.01:1654,54,0	1/1:5,31:36:18.06:576,18,0	1/1:3,22:25:51.18:1704,51,0	1/1:0,22:22:35.79:1024,36,0	1/1:1,11:12:9.03:340,9,0	1/1:0,11:11:21.07:769,21,0	1/1:2,24:26:54.15:1607,54,0	1/1:2,22:24:48.16:1998,48,0	1/1:1,4:4:3.01:125,3,0
chr10	29309336	.	A	AG	2501.09	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-12.993;DP=797;FS=1.563;HRun=4;HaplotypeScore=130.1392;InbreedingCoeff=0.9998;MQ=87.38;MQ0=0;MQRankSum=0.990;QD=35.73;ReadPosRankSum=2.622;VQSLOD=2.2385;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:58:99:0,153,1681	0/0:10,0:10:30.09:0,30,340	0/0:32,0:32:86.27:0,86,950	0/0:24,0:24:66.15:0,66,722	0/0:40,0:40:99:0,111,1258	0/0:22,0:22:63.16:0,63,704	0/0:15,0:15:45.13:0,45,510	0/0:45,0:45:99:0,123,1395	1/1:0,17:17:48.16:657,48,0	0/0:26,0:26:75.21:0,75,843	0/0:30,0:30:84.22:0,84,941	0/0:29,0:29:75.21:0,75,851	0/0:40,0:40:99:0,115,1284	0/0:22,0:22:57.14:0,57,637	0/0:28,0:28:71.54:0,72,771	0/0:22,0:22:54.12:0,54,592	1/1:1,30:31:90.23:1208,90,0	1/1:3,19:22:57.19:779,57,0	0/0:31,0:31:90.26:0,90,1021	0/0:31,0:31:84.24:0,84,952	0/0:33,0:33:93.26:0,93,1055	0/0:23,0:23:69.20:0,69,782	0/0:28,0:28:81.22:0,81,908	0/0:35,0:35:99:0,105,1176	0/0:23,0:23:57.16:0,57,646	0/0:38,0:38:99:0,111,1259	0/0:30,0:30:87.25:0,87,984	0/0:12,0:12:36.10:0,36,408
chr10	29309691	.	TA	T	15070.50	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=1.020;DP=620;FS=2.749;HRun=7;HaplotypeScore=75.3146;InbreedingCoeff=0.9968;MQ=69.72;MQ0=0;MQRankSum=-1.420;QD=26.39;ReadPosRankSum=3.783;VQSLOD=5.6490;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:75.22:0,75,927	1/1:1,8:9:21.05:214,21,0	0/0:9,0:9:24.05:0,24,280	0/0:13,0:13:29.99:0,30,325	1/1:5,33:38:90.19:918,90,0	1/1:2,23:25:66.14:673,66,0	1/1:1,16:17:48.11:489,48,0	1/1:5,21:26:63.11:624,63,0	1/1:2,13:15:39.09:398,39,0	1/1:3,15:18:45.10:458,45,0	1/1:1,19:20:50.97:494,51,0	1/1:3,24:27:66.15:673,66,0	1/1:2,18:20:42.09:428,42,0	1/1:3,13:16:36.08:367,36,0	1/1:2,19:21:51.11:520,51,0	1/1:2,24:26:66.15:673,66,0	1/1:0,18:18:51.12:520,51,0	1/1:0,20:20:57.13:581,57,0	1/1:1,17:18:51.10:514,51,0	1/1:0,44:44:99:1282,129,0	1/1:0,10:10:27.06:275,27,0	1/1:0,21:21:60.09:601,60,0	1/1:1,28:29:72.06:734,72,0	1/1:1,18:19:51.12:520,51,0	1/1:2,30:32:90.20:917,90,0	1/1:3,27:30:81.18:826,81,0	1/1:4,39:43:76.53:1094,77,0	1/1:0,9:9:27.06:275,27,0
chr10	29310897	.	T	TACACACAC	8205.38	PASS	AB=0.612;AC=47;AF=0.904;AN=52;BaseQRankSum=-2.183;DP=505;FS=8.673;HRun=0;HaplotypeScore=144.4306;InbreedingCoeff=0.1660;MQ=58.03;MQ0=4;MQRankSum=-2.758;QD=18.52;ReadPosRankSum=1.133;VQSLOD=3.3507;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:30.08:0,30,651	1/1:5,4:9:2.28:121,2,0	./.	./.	1/1:18,0:18:9:136,9,0	1/1:12,4:17:12.16:491,12,0	1/1:28,0:27:17.50:193,18,0	1/1:22,0:21:30.03:543,30,0	1/1:17,0:17:15.05:487,15,0	1/1:19,0:19:26.07:389,26,0	1/1:28,0:27:14.55:286,15,0	1/1:15,2:17:24.06:565,24,0	1/1:12,7:20:6.99:199,7,0	1/1:10,0:10:6.02:142,6,0	1/1:13,4:19:6.91:229,7,0	0/1:6,6:15:3.77:330,0,4	0/1:9,0:26:29.74:464,0,30	0/1:6,0:16:17.81:452,0,18	1/1:8,0:8:10.33:128,10,0	1/1:10,0:16:3.01:66,3,0	1/1:18,0:18:7.26:205,7,0	1/1:15,0:15:10.66:419,11,0	1/1:11,5:18:9.03:367,9,0	1/1:13,7:20:9.03:308,9,0	1/1:9,0:14:3.01:64,3,0	1/1:14,6:19:25.62:616,26,0	1/1:13,5:22:24.06:594,24,0	1/1:7,0:7:12.04:413,12,0
chr10	29310899	.	C	CACACACACAG	5890.94	PASS	AB=0.998;AC=26;AF=0.464;AN=56;BaseQRankSum=7.606;DP=507;FS=3.004;HRun=0;HaplotypeScore=167.8772;InbreedingCoeff=-0.7226;MQ=55.57;MQ0=4;MQRankSum=-7.407;QD=13.21;ReadPosRankSum=0.009;VQSLOD=4.0339;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:60.02:0,60,1099	0/1:10,0:9:42.06:67,0,42	0/0:22,0:10:21.85:0,22,178	0/0:17,0:12:23.77:0,24,220	0/1:19,0:19:61.96:62,0,141	0/1:17,0:17:51.81:292,0,52	0/1:29,0:28:29.31:29,0,283	0/1:20,0:19:99:254,0,187	1/1:5,14:19:17.15:920,17,0	0/1:19,0:19:99:155,0,125	0/1:27,0:26:85.51:137,0,86	0/1:17,0:17:20.70:312,0,21	0/1:20,0:20:99:107,0,139	0/1:10,0:10:56.88:78,0,57	0/1:19,0:19:72.22:174,0,72	0/1:15,1:15:67.49:292,0,67	0/1:25,0:25:38.76:636,0,39	0/1:16,0:16:20.71:516,0,21	0/1:8,0:8:46:54,0,46	0/1:18,0:17:22.61:23,0,97	0/1:20,0:20:87.11:87,0,103	0/1:15,0:15:99:254,0,117	0/1:17,0:17:92.79:212,0,93	0/1:22,0:21:31.89:196,0,32	0/1:14,0:14:19.31:19,0,129	0/1:19,0:18:99:377,0,101	0/1:23,0:23:58.78:375,0,59	0/1:7,0:7:27.89:262,0,28
chr10	29312031	.	G	GA	737.92	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.730;DP=719;FS=10.401;HRun=1;HaplotypeScore=71.4606;InbreedingCoeff=0.9985;MQ=82.35;MQ0=1;MQRankSum=-2.816;QD=28.38;ReadPosRankSum=-2.684;VQSLOD=1.7682;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,25:26:65.91:833,66,0	0/0:12,0:12:36.12:0,36,467	0/0:23,0:24:26.74:0,27,696	0/0:20,0:20:54.15:0,54,685	0/0:36,0:36:99:0,105,1363	0/0:29,0:29:84.25:0,84,1075	0/0:24,0:24:69.22:0,69,896	0/0:32,0:32:93.30:0,93,1207	0/0:22,0:22:60.19:0,60,779	0/0:39,0:39:99:0,111,1425	0/0:21,0:21:60.19:0,60,778	0/0:22,0:22:63.19:0,63,804	0/0:26,0:26:75.24:0,75,973	0/0:25,0:25:75.24:0,75,974	0/0:28,0:28:84.26:0,84,1076	0/0:21,0:21:60.18:0,60,764	0/0:24,0:24:72.23:0,72,932	0/0:17,0:17:51.17:0,51,661	0/0:22,0:21:60.17:0,60,752	0/0:34,0:34:99:0,99,1285	0/0:28,0:28:81.26:0,81,1052	0/0:30,0:30:90.29:0,90,1169	0/0:28,0:28:84.26:0,84,1073	0/0:11,0:11:33.11:0,33,429	0/0:37,0:37:99:0,111,1441	0/0:33,0:33:96.31:0,96,1246	0/0:32,0:32:96.31:0,96,1247	0/0:16,0:16:48.16:0,48,623
chr10	29312167	.	A	AAG	1367.87	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-3.718;DP=683;FS=3.952;HRun=0;HaplotypeScore=75.3455;InbreedingCoeff=0.9993;MQ=89.44;MQ0=0;MQRankSum=-3.645;QD=47.17;ReadPosRankSum=1.773;VQSLOD=5.1252;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,29:29:72.25:1463,72,0	0/0:14,0:14:39.12:0,39,612	0/0:30,0:30:87.73:0,88,1293	0/0:20,0:20:56.78:0,57,857	0/0:21,0:21:63.22:0,63,1028	0/0:26,0:26:78.27:0,78,1272	0/0:16,0:16:48.16:0,48,782	0/0:32,0:32:93.31:0,93,1487	0/0:21,0:21:63.20:0,63,1003	0/0:29,0:29:87.30:0,87,1412	0/0:21,0:21:63.22:0,63,1028	0/0:23,0:23:69.24:0,69,1126	0/0:31,0:31:90.31:0,90,1457	0/0:18,0:18:54.18:0,54,879	0/0:28,0:28:81.26:0,81,1298	0/0:25,0:25:72.25:0,72,1169	0/0:20,0:20:60.20:0,60,971	0/0:13,0:13:39.13:0,39,627	0/0:26,0:26:78.27:0,78,1264	0/0:33,0:33:99:0,99,1615	0/0:46,0:46:99:0,135,2165	0/0:26,0:26:75.21:0,75,1193	0/0:17,0:17:48.16:0,48,783	0/0:27,0:27:81.25:0,81,1296	0/0:21,0:21:63.19:0,63,998	0/0:27,0:27:81.28:0,81,1320	0/0:33,0:33:99:0,99,1615	0/0:10,0:10:30.10:0,30,489
chr10	29312703	.	AT	A	789.61	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.160;DP=647;FS=0.746;HRun=5;HaplotypeScore=62.2330;InbreedingCoeff=0.9917;MQ=84.66;MQ0=0;MQRankSum=-2.816;QD=23.22;ReadPosRankSum=0.758;VQSLOD=2.5516;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,30:34:78.22:884,78,0	0/0:15,0:15:45.07:0,45,577	0/0:32,0:32:96.30:0,96,1275	0/0:16,0:16:39.06:0,39,488	0/0:33,0:33:96.28:0,96,1266	0/0:25,0:25:75.25:0,75,1026	0/0:20,0:20:60.17:0,60,787	0/0:33,0:33:96.29:0,96,1261	0/0:19,0:19:54.16:0,54,708	0/0:25,0:25:75.24:0,75,1013	0/0:22,0:22:66.17:0,66,881	0/0:19,0:19:54.17:0,54,723	0/0:27,0:27:72.24:0,72,982	0/0:22,0:22:63.20:0,63,845	0/0:29,0:29:87.27:0,87,1160	0/0:23,0:23:63.20:0,63,845	0/0:33,0:33:96.32:0,96,1313	0/0:13,0:13:39.13:0,39,530	0/0:15,0:15:39.13:0,39,534	0/0:28,0:28:81.25:0,81,1086	0/0:27,0:27:78.18:0,78,997	0/0:24,0:24:69.21:0,69,915	0/0:24,0:24:72.21:0,72,950	0/0:15,0:15:45.13:0,45,594	0/0:13,0:13:36.08:0,36,447	0/0:30,0:30:90.29:0,90,1204	0/0:25,0:24:75.16:0,75,985	0/0:6,0:6:18.06:0,18,245
chr10	29313086	.	C	CAG	1421.51	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.050;DP=728;FS=4.750;HRun=0;HaplotypeScore=82.5232;InbreedingCoeff=0.9919;MQ=65.59;MQ0=0;MQRankSum=-4.468;QD=47.38;ReadPosRankSum=3.003;VQSLOD=4.8618;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,28:30:81.28:1516,81,0	0/0:7,0:7:21.06:0,21,290	0/0:21,0:20:51.15:0,51,715	0/0:20,0:19:51.17:0,51,716	0/0:42,0:42:99:0,126,1815	0/0:25,0:25:72.24:0,72,1060	0/0:21,0:21:63.20:0,63,908	0/0:31,0:31:90.30:0,90,1309	0/0:32,0:32:93.31:0,93,1368	0/0:33,0:33:93.31:0,93,1369	0/0:26,0:26:69.22:0,69,996	0/0:26,0:26:75.25:0,75,1103	0/0:27,0:27:78.25:0,78,1129	0/0:32,0:32:90.29:0,90,1306	0/0:38,0:38:99:0,114,1678	0/0:31,0:31:93.29:0,93,1330	0/0:25,0:25:75.21:0,75,1063	0/0:13,0:13:39.10:0,39,546	0/0:17,0:17:48.15:0,48,673	0/0:30,0:30:90.29:0,90,1301	0/0:33,0:33:93.05:0,93,1334	0/0:19,0:19:54.18:0,54,795	0/0:35,0:35:99:0,102,1482	0/0:23,0:23:60.19:0,60,863	0/0:26,0:26:75.25:0,75,1104	0/0:28,0:28:81.26:0,81,1175	0/0:29,0:28:87.25:0,87,1221	0/0:8,0:8:21.07:0,21,309
chr10	29315171	.	AGTC	A	299.09	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.214;DP=298;FS=0.000;HRun=0;HaplotypeScore=37.6547;InbreedingCoeff=0.6373;MQ=50.95;MQ0=12;MQRankSum=-1.823;QD=21.36;ReadPosRankSum=0.154;VQSLOD=2.9051;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,14:13:21.07:391,21,0	0/0:7,0:4:12.01:0,12,241	0/0:8,0:2:6.02:0,6,148	0/0:18,0:12:30.10:0,30,727	0/0:12,0:8:18.06:0,18,444	0/0:8,0:7:18.06:0,18,444	0/0:14,0:13:33.11:0,33,813	0/0:22,0:21:60.19:0,60,1366	0/0:11,0:6:12.04:0,12,267	0/0:6,0:5:15.05:0,15,367	0/0:7,0:7:18.06:0,18,426	0/0:10,0:9:24.08:0,24,585	0/0:11,0:9:21.07:0,21,476	0/0:12,0:10:24.08:0,24,550	0/0:14,0:9:21.07:0,21,514	0/0:7,0:4:9.03:0,9,222	0/0:13,0:12:30.10:0,30,728	0/0:10,0:10:24.08:0,24,524	0/0:14,0:12:36.12:0,36,854	0/0:7,0:5:15.05:0,15,352	0/0:17,0:17:51.18:0,51,1239	0/0:3,0:2:6.02:0,6,119	0/0:9,0:5:15.05:0,15,369	0/0:10,0:10:30.10:0,30,740	0/0:11,0:11:33.09:0,33,743	0/0:11,0:10:30.10:0,30,711	0/0:10,0:5:15.05:0,15,366	0/0:2,0:2:6.02:0,6,148
chr10	29315563	.	AGTC	A	743.27	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=0.619;DP=401;FS=2.467;HRun=0;HaplotypeScore=91.4313;InbreedingCoeff=0.7235;MQ=45.51;MQ0=15;MQRankSum=-2.999;QD=32.32;ReadPosRankSum=0.988;VQSLOD=4.1715;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,23:21:45.15:838,45,0	0/0:10,0:7:21.07:0,21,518	0/0:10,0:2:6.02:0,6,141	0/0:8,0:2:6.02:0,6,142	0/0:22,0:16:45.15:0,45,1109	0/0:7,0:5:12.04:0,12,296	0/0:14,0:14:30.10:0,30,733	0/0:15,0:8:24.06:0,24,540	0/0:14,0:10:24.08:0,24,589	0/0:16,0:13:39.13:0,39,961	0/0:13,0:9:24.08:0,24,591	0/0:15,0:15:42.14:0,42,1032	0/0:14,0:9:21.07:0,21,511	0/0:19,0:14:39.13:0,39,961	0/0:14,0:10:30.10:0,30,739	0/0:20,0:18:51.18:0,51,1253	0/0:11,0:11:27.09:0,27,664	0/0:13,0:12:33.11:0,33,778	0/0:10,0:8:24.08:0,24,587	0/0:15,0:9:27.09:0,27,664	0/0:19,0:19:51.18:0,51,1256	0/0:18,0:16:45.15:0,45,1107	0/0:9,0:7:18.06:0,18,444	0/0:11,0:10:27.09:0,27,665	0/0:14,0:14:42.14:0,42,1023	0/0:22,0:18:54.19:0,54,1331	0/0:23,0:16:45.15:0,45,1098	0/0:2,0:2:6.02:0,6,148
chr10	29317028	.	TG	T	19817.05	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=11.795;DP=696;FS=0.743;HRun=1;HaplotypeScore=126.0175;InbreedingCoeff=0.9990;MQ=88.71;MQ0=0;MQRankSum=-6.362;QD=34.83;ReadPosRankSum=2.900;VQSLOD=4.5753;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,34:35:91.17:1148,91,0	1/1:0,17:17:48.15:607,48,0	0/0:21,0:21:60.16:0,60,892	0/0:31,0:31:93.31:0,93,1444	1/1:0,28:28:78.25:989,78,0	1/1:5,20:25:73.41:862,73,0	1/1:0,24:24:63.20:796,63,0	1/1:0,32:32:96.30:1221,96,0	0/0:32,0:32:96.33:0,96,1531	1/1:0,28:28:84.23:1050,84,0	1/1:0,19:19:54.13:664,54,0	1/1:1,24:25:65.32:832,65,0	1/1:0,26:26:69.22:873,69,0	1/1:0,19:19:54.17:690,54,0	1/1:0,26:26:66.21:837,66,0	1/1:1,33:34:48.34:1130,48,0	0/0:24,0:24:72.25:0,72,1147	0/0:19,0:19:54.18:0,54,859	1/1:0,13:13:39.13:503,39,0	1/1:0,24:24:63.10:770,63,0	1/1:0,30:30:81.26:1032,81,0	1/1:1,23:24:70.47:876,70,0	1/1:0,21:21:57.18:721,57,0	1/1:0,30:30:87.28:1109,87,0	1/1:1,17:17:46.68:609,47,0	1/1:1,32:33:95.44:1204,95,0	1/1:0,30:30:81.26:1029,81,0	1/1:0,8:8:21.07:267,21,0
chr10	29317264	.	TTG	T	815.47	PASS	AB=0.969;AC=25;AF=0.481;AN=52;BaseQRankSum=2.071;DP=655;FS=5.031;HRun=0;HaplotypeScore=149.1285;InbreedingCoeff=-0.0371;MQ=66.56;MQ0=13;MQRankSum=-1.396;QD=1.93;ReadPosRankSum=2.266;VQSLOD=2.3236;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:31,1:35:18.04:186,18,0	1/1:9,0:10:5.87:26,6,0	./.	./.	0/1:23,1:24:20.40:20,0,57	0/1:24,1:25:38.65:39,0,171	0/0:31,1:31:5.90:0,6,273	0/0:30,0:26:8.87:0,9,57	1/1:10,8:19:23.89:240,24,0	0/1:21,1:22:1.37:1,0,235	0/0:14,0:14:5.53:0,6,55	0/1:22,2:24:61.55:62,0,124	0/1:17,1:18:9.32:9,0,175	0/1:26,0:25:35.72:36,0,253	0/1:31,0:31:85.26:85,0,150	0/0:20,0:20:14.94:0,15,147	1/1:23,2:25:5.98:52,6,0	1/1:13,1:14:8.57:100,9,0	0/1:28,0:28:3.81:4,0,228	0/1:23,0:23:11.52:12,0,165	0/0:35,0:35:19.53:0,20,180	0/1:22,1:23:6.81:7,0,222	1/1:12,1:12:3.78:19,4,0	0/0:30,0:27:24.05:0,24,268	0/1:25,0:23:24.51:25,0,86	0/1:27,0:26:38.24:38,0,173	0/0:18,0:18:14.98:0,15,156	0/1:7,1:8:19.61:20,0,95
chr10	29317300	.	G	GTC	526.69	PASS	AB=0.975;AC=17;AF=0.304;AN=56;BaseQRankSum=2.178;DP=660;FS=1.756;HRun=0;HaplotypeScore=162.8057;InbreedingCoeff=-0.1374;MQ=51.64;MQ0=23;MQRankSum=0.112;QD=1.41;ReadPosRankSum=1.183;VQSLOD=2.4910;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:45,0:44:20.14:151,20,0	0/0:15,0:14:12.63:0,13,86	0/0:10,0:5:9:0,9,82	0/0:19,0:7:11.76:0,12,98	0/1:19,0:18:26.17:26,0,61	0/1:22,1:23:40.57:41,0,175	0/0:41,1:40:1.68:0,2,414	0/0:28,0:24:54.57:0,55,300	0/1:20,0:20:10.96:30,0,11	0/1:30,0:29:1.16:1,0,447	0/0:13,0:13:9.41:0,9,86	0/1:31,0:30:58.03:58,0,143	0/1:23,0:23:5.95:6,0,181	0/1:25,1:25:29.36:29,0,306	0/1:28,2:30:64.41:64,0,173	0/0:19,0:18:25.48:0,25,242	0/1:25,0:25:17.96:58,0,18	0/1:17,0:15:31.78:47,0,32	0/1:12,1:13:9.84:10,0,252	0/0:20,0:20:19.43:0,19,191	0/0:36,0:33:3.26:0,3,216	0/0:24,0:24:18.79:0,19,211	1/1:19,0:18:8.13:65,8,0	0/0:35,0:32:14.25:0,14,286	0/1:24,1:22:28.25:28,0,130	0/1:25,2:25:71.67:72,0,267	0/0:15,0:15:6.99:0,7,142	0/0:10,0:9:7.76:0,8,142
chr10	29317304	.	G	GTC	1741.24	PASS	AB=0.979;AC=24;AF=0.429;AN=56;BaseQRankSum=4.644;DP=663;FS=12.748;HRun=0;HaplotypeScore=155.6809;InbreedingCoeff=-0.4980;MQ=51.84;MQ0=24;MQRankSum=-2.563;QD=3.03;ReadPosRankSum=3.436;VQSLOD=1.7389;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:45,0:44:8.57:16,0,9	0/1:14,0:14:6.13:6,0,17	0/0:17,0:9:20.99:0,21,200	0/0:24,0:12:26.65:0,27,222	0/1:17,0:16:19.52:66,0,20	0/1:22,1:23:88.13:88,0,96	0/1:39,1:38:52.25:77,0,52	1/1:30,0:26:18.11:313,18,0	0/1:21,0:21:2.31:32,0,2	0/1:27,0:26:47.13:308,0,47	0/0:13,0:13:8.12:0,8,29	0/1:30,0:29:18.18:48,0,18	0/1:23,0:23:51.55:68,0,52	0/1:26,1:26:57.82:58,0,108	0/1:26,3:29:58.82:95,0,59	0/0:20,0:19:19.05:0,19,87	0/1:23,0:23:14.76:15,0,23	0/1:17,0:15:10.43:42,0,10	0/1:14,1:15:17.24:153,0,17	0/1:20,0:20:6.55:7,0,23	0/1:34,1:32:52.56:53,0,60	0/1:24,0:24:4.62:5,0,71	0/1:20,0:19:5.77:19,0,6	0/1:34,0:31:25.21:25,0,49	0/1:24,1:22:40.75:80,0,41	0/1:23,2:24:99:252,0,108	0/0:15,0:15:16.16:0,16,84	0/1:9,0:8:14.78:72,0,15
chr10	29317314	.	GTC	G	984.38	PASS	AB=0.982;AC=16;AF=0.286;AN=56;BaseQRankSum=-0.743;DP=667;FS=1.036;HRun=0;HaplotypeScore=147.3326;InbreedingCoeff=-0.0781;MQ=53.90;MQ0=21;MQRankSum=-0.564;QD=2.90;ReadPosRankSum=2.753;VQSLOD=2.4946;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:44,0:44:7.38:49,7,0	0/0:13,0:12:10.71:0,11,42	0/0:24,0:14:21.23:0,21,597	0/0:29,0:17:50.83:0,51,738	0/0:14,0:13:2.58:0,3,53	0/1:25,0:25:24.39:24,0,56	0/0:42,0:40:4.67:0,5,114	0/1:27,0:26:99:119,0,116	1/1:5,16:21:21.05:295,21,0	0/1:29,0:28:99:128,0,160	0/0:14,0:14:12.49:0,12,54	0/1:34,0:33:6.48:6,0,180	0/1:22,0:22:11.10:11,0,176	0/0:27,0:27:3.34:0,3,157	0/1:24,1:25:25.71:26,0,170	0/0:16,0:15:9.03:0,9,124	0/1:21,2:23:11.98:76,0,12	0/1:17,2:17:2.80:157,0,3	0/1:18,0:18:65.95:66,0,203	0/0:19,0:19:33.16:0,33,211	0/0:35,0:33:11.61:0,12,107	0/0:20,0:20:27.03:0,27,245	0/0:21,0:20:1.06:0,1,4	0/0:35,0:33:15.25:0,15,268	0/1:24,0:21:33.45:33,0,59	0/1:20,0:19:59.08:112,0,59	0/0:18,0:18:11.02:0,11,87	0/1:9,0:8:23.83:42,0,24
chr10	29317316	.	CTG	C	2323.43	PASS	AB=0.969;AC=29;AF=0.518;AN=56;BaseQRankSum=-4.137;DP=660;FS=0.538;HRun=0;HaplotypeScore=138.3133;InbreedingCoeff=0.0738;MQ=54.80;MQ0=19;MQRankSum=-1.270;QD=4.49;ReadPosRankSum=2.958;VQSLOD=2.8844;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:35,5:40:6.59:70,7,0	0/1:14,0:13:22.88:23,0,44	0/0:24,0:14:37.96:0,38,590	0/0:30,0:18:54.03:0,54,818	0/1:13,1:13:12.29:12,0,31	0/1:23,2:25:14.80:61,0,15	1/1:40,2:40:2.47:34,2,0	1/1:13,14:26:35.42:471,35,0	1/1:20,0:20:17.97:161,18,0	1/1:27,0:26:6.46:486,6,0	0/0:12,1:13:9.49:0,9,29	0/1:31,2:32:43.78:44,0,63	0/1:23,0:23:43.90:44,0,81	0/1:27,1:28:16.56:17,0,48	0/1:23,2:25:70.30:80,0,70	0/0:16,1:16:8.86:0,9,58	1/1:3,0:23:2.36:43,2,0	0/1:6,0:16:1.74:56,0,2	0/1:17,1:18:7.89:232,0,8	0/0:20,0:20:31.96:0,32,127	0/1:35,0:33:0.26:0,0,26	0/0:19,0:19:25.37:0,25,123	0/1:21,0:20:0.57:22,0,1	0/1:34,0:33:31.32:31,0,77	0/1:23,1:21:20.20:57,0,20	1/1:19,1:19:24.65:447,25,0	0/0:19,0:19:7.94:0,8,43	1/1:7,1:7:9.03:108,9,0
chr10	29317318	.	G	GTGTC	9120.99	PASS	AB=0.701;AC=44;AF=0.786;AN=56;BaseQRankSum=-0.595;DP=700;FS=3.194;HRun=0;HaplotypeScore=137.3688;InbreedingCoeff=0.2484;MQ=54.93;MQ0=19;MQRankSum=-1.052;QD=14.48;ReadPosRankSum=4.242;VQSLOD=4.6844;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:10,31:43:6.91:53,0,7	0/1:3,13:16:1.25:132,0,1	0/0:24,0:14:39.60:0,40,652	0/0:31,0:19:57.09:0,57,912	1/1:5,12:17:6.02:118,6,0	0/1:7,16:25:33.39:183,0,33	1/1:10,30:39:4.98:70,5,0	1/1:28,0:27:62.66:803,63,0	0/1:21,0:21:20.10:20,0,22	1/1:5,20:24:60.28:1129,60,0	0/0:5,10:15:0.25:0,0,1	1/1:5,28:35:23.46:495,23,0	1/1:2,21:24:23.82:520,24,0	1/1:7,22:31:14.08:309,14,0	1/1:9,17:27:27.92:576,28,0	1/1:2,16:19:9.01:227,9,0	1/1:23,0:23:4.15:49,4,0	0/1:16,0:15:28.62:29,0,30	1/1:4,17:22:57.03:933,57,0	0/1:1,20:21:0.53:305,0,1	1/1:6,28:34:8.44:242,8,0	1/1:2,17:20:18.01:473,18,0	1/1:2,19:21:2.82:80,3,0	1/1:9,27:36:30.10:787,30,0	1/1:5,19:21:14.70:342,15,0	1/1:5,16:22:52.67:949,53,0	1/1:2,18:22:6.02:139,6,0	1/1:8,0:7:9.03:158,9,0
chr10	29317524	.	T	TTTGAATAGGA	51660.96	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=4.223;DP=754;FS=1.245;HRun=0;HaplotypeScore=249.2437;InbreedingCoeff=0.9819;MQ=63.78;MQ0=0;MQRankSum=-15.997;QD=83.73;ReadPosRankSum=-1.485;VQSLOD=4.2983;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,12:41:66.23:2880,66,0	1/1:3,2:8:14.97:496,15,0	0/0:28,0:28:78.27:0,78,2314	0/0:25,0:26:38.47:0,38,974	1/1:12,9:28:47.94:1339,48,0	1/1:8,9:22:48.16:2341,48,0	1/1:11,7:28:54.18:2337,54,0	1/1:13,2:30:87.23:3157,87,0	0/0:28,0:28:75.24:0,75,2268	1/1:10,7:19:45.62:2101,46,0	1/1:6,3:13:21.07:556,21,0	1/1:8,26:49:96.33:4669,96,0	1/1:7,11:33:51.17:2422,51,0	1/1:10,13:36:63.14:2631,63,0	1/1:10,18:38:81.24:3538,81,0	1/1:9,14:29:60.21:2847,60,0	0/0:33,0:33:96.28:0,96,2830	0/0:22,0:22:60.21:0,60,1947	1/1:9,8:29:81.23:3426,81,0	1/1:12,6:29:45.06:1474,45,0	1/1:8,8:27:42.06:1602,42,0	1/1:8,9:19:48.16:1870,48,0	1/1:8,10:23:42.10:1522,42,0	1/1:8,12:28:36.08:1575,36,0	1/1:14,10:29:60.08:2593,60,0	1/1:7,3:18:51.17:2086,51,0	1/1:5,21:36:75.26:3724,75,0	1/1:0,3:4:9.03:476,9,0
chr10	29320717	.	T	TA	487.14	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.942;DP=701;FS=3.202;HRun=8;HaplotypeScore=65.4819;InbreedingCoeff=0.9820;MQ=80.56;MQ0=0;MQRankSum=-1.982;QD=22.14;ReadPosRankSum=1.110;VQSLOD=4.1290;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,17:22:51.15:582,51,0	0/0:22,0:22:60.03:0,60,549	0/0:18,0:18:44.52:0,45,393	0/0:17,0:17:39.02:0,39,356	0/0:39,1:40:64.40:0,64,843	0/0:35,0:35:99:0,102,934	0/0:15,0:15:42:0,42,379	0/0:30,0:30:78.02:0,78,710	0/0:31,0:31:81.02:0,81,735	0/0:40,0:40:99:0,111,1013	0/0:23,0:23:60.02:0,60,549	0/0:22,0:22:54.01:0,54,494	0/0:24,0:24:62.22:0,62,549	0/0:26,0:26:69.02:0,69,627	0/0:36,0:36:96.03:0,96,874	0/0:24,0:24:54.02:0,54,494	0/0:28,0:28:72.03:0,72,659	0/0:11,0:11:33.02:0,33,302	0/0:21,0:21:51.02:0,51,467	0/0:36,0:36:96.01:0,96,864	0/0:16,0:16:48.03:0,48,439	0/0:37,0:37:93.04:0,93,851	0/0:32,0:32:93.04:0,93,851	0/0:10,0:10:24.01:0,24,220	0/0:24,0:24:66.03:0,66,604	0/0:31,0:31:81.03:0,81,741	0/0:23,0:23:60.01:0,60,545	0/0:7,0:7:15.01:0,15,137
chr10	29321171	.	AC	A	1289.95	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.980;DP=645;FS=5.516;HRun=1;HaplotypeScore=88.0522;InbreedingCoeff=0.8502;MQ=84.23;MQ0=0;MQRankSum=-4.005;QD=36.86;ReadPosRankSum=1.368;VQSLOD=4.0149;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,35:35:99:1385,99,0	0/0:10,0:10:30.10:0,30,480	0/0:23,0:23:69.22:0,69,1066	0/0:16,0:16:45.15:0,45,718	0/0:13,0:13:39.13:0,39,615	0/0:18,0:18:54.18:0,54,863	0/0:22,0:22:66.22:0,66,1050	0/0:35,0:35:99:0,105,1610	0/0:24,0:24:72.25:0,72,1151	0/0:27,0:27:78.27:0,78,1247	0/0:17,0:17:51.17:0,51,812	0/0:26,0:26:75.26:0,75,1196	0/0:29,0:29:87.28:0,87,1365	0/0:24,0:24:72.23:0,72,1124	0/0:31,0:31:90.31:0,90,1436	0/0:28,0:28:84.29:0,84,1336	0/0:35,0:35:99:0,105,1678	0/0:13,0:13:33.11:0,33,527	0/0:18,0:18:54.18:0,54,862	0/0:23,0:23:69.23:0,69,1091	0/0:39,0:39:99:0,108,1727	0/0:14,0:14:39.13:0,39,621	0/0:14,0:14:42.14:0,42,669	0/0:32,0:31:93.32:0,93,1476	0/0:24,0:24:72.25:0,72,1151	0/0:22,0:22:66.23:0,66,1054	0/0:32,0:32:93.32:0,93,1474	0/0:1,0:1:3.01:0,3,48
chr10	29323001	.	T	TTGAA	1226.92	PASS	AB=0.608;AC=1;AF=0.018;AN=56;BaseQRankSum=-4.630;DP=708;FS=0.881;HRun=0;HaplotypeScore=110.8900;InbreedingCoeff=0.1069;MQ=69.97;MQ0=0;MQRankSum=-1.596;QD=39.58;ReadPosRankSum=1.111;VQSLOD=3.9892;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:11,19:31:11.28:1301,0,11	0/0:13,0:13:30.10:0,30,495	0/0:18,0:17:20.45:0,20,345	0/0:24,0:24:36.06:0,36,511	0/0:29,0:30:75.25:0,75,1210	0/0:34,0:33:84.28:0,84,1364	0/0:25,0:25:60.16:0,60,909	0/0:26,0:26:39.13:0,39,642	0/0:26,0:26:63.22:0,63,1035	0/0:51,0:51:99:0,105,1730	0/0:25,0:25:69.24:0,69,1139	0/0:28,0:28:63.20:0,63,1011	0/0:25,0:25:63.21:0,63,1011	0/0:21,0:21:48.16:0,48,793	0/0:38,0:38:96.30:0,96,1536	0/0:31,0:31:69.24:0,69,1137	0/0:22,0:22:45.15:0,45,743	0/0:19,0:19:48.15:0,48,768	0/0:18,0:18:42.11:0,42,643	0/0:28,0:28:60.20:0,60,968	0/0:19,0:19:27.09:0,27,446	0/0:28,0:28:69.24:0,69,1136	0/0:24,0:24:57.19:0,57,941	0/0:19,0:19:42.14:0,42,694	0/0:23,0:23:48.13:0,48,742	0/0:21,0:21:45.15:0,45,743	0/0:35,0:35:84.27:0,84,1349	0/0:6,0:6:15.05:0,15,248
chr10	29324861	.	AG	A	3534.10	PASS	AB=0.904;AC=41;AF=0.732;AN=56;BaseQRankSum=-1.982;DP=351;FS=7.348;HRun=7;HaplotypeScore=55.5524;InbreedingCoeff=0.5754;MQ=63.25;MQ0=36;MQRankSum=1.974;QD=12.85;ReadPosRankSum=4.763;VQSLOD=2.0982;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:7:14.97:0,15,157	0/0:0,0:1:2.04:0,2,6	0/0:32,0:14:21.85:0,22,192	0/1:25,0:9:22.13:24,0,22	1/1:3,7:11:19.08:208,19,0	0/1:13,0:11:2.60:5,0,3	1/1:10,12:20:30.79:331,31,0	1/1:4,11:15:12:256,12,0	0/0:6,0:4:6.02:0,6,75	1/1:3,9:11:24.05:243,24,0	1/1:2,3:5:9.02:92,9,0	1/1:4,5:8:11.85:119,12,0	1/1:4,8:8:24.05:242,24,0	1/1:14,0:11:6.01:61,6,0	1/1:4,10:11:23.97:230,24,0	1/1:2,8:9:18.01:182,18,0	0/0:9,0:7:15.01:0,15,170	0/0:17,0:15:22.82:0,23,236	0/1:10,5:12:19.77:135,0,20	1/1:0,8:8:17.69:182,18,0	1/1:8,10:13:24.05:244,24,0	1/1:11,0:9:5.75:43,6,0	1/1:5,9:11:6.31:224,6,0	1/1:2,6:8:5.72:61,6,0	1/1:1,10:11:27.06:273,27,0	1/1:3,10:14:12.29:283,12,0	1/1:11,0:8:3.89:38,4,0	1/1:0,2:2:6.01:61,6,0
chr10	29324865	.	G	GGGA	5025.84	PASS	AB=1.000;AC=42;AF=0.750;AN=56;BaseQRankSum=-2.590;DP=342;FS=6.017;HRun=0;HaplotypeScore=59.7095;InbreedingCoeff=0.5929;MQ=59.80;MQ0=37;MQRankSum=1.281;QD=18.41;ReadPosRankSum=3.753;VQSLOD=3.6145;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:6:10.30:0,10,95	0/0:1,0:1:3:0,3,25	0/0:30,0:12:19.22:0,19,191	0/1:25,0:8:21.07:21,0,34	1/1:10,0:10:20.02:235,20,0	1/1:4,10:12:3.41:128,3,0	1/1:20,1:19:38:510,38,0	1/1:17,0:17:29.23:387,29,0	0/0:6,0:4:6.02:0,6,75	1/1:13,0:12:26.09:281,26,0	1/1:5,0:5:9.02:92,9,0	1/1:8,0:7:14.67:157,15,0	1/1:12,0:8:23.97:336,24,0	1/1:5,12:14:6.49:102,6,0	1/1:13,0:10:24.06:372,24,0	1/1:11,0:10:23.76:322,24,0	0/0:7,0:5:15.01:0,15,181	0/0:15,0:13:27:0,27,305	0/1:14,0:11:18.94:157,0,19	1/1:8,0:8:18.04:187,18,0	1/1:13,0:10:24.07:335,24,0	1/1:4,8:9:5.89:111,6,0	1/1:13,0:10:23.56:270,24,0	1/1:10,0:10:6.02:79,6,0	1/1:10,0:10:27.09:443,27,0	1/1:13,0:13:2.57:375,3,0	1/1:3,7:8:5.75:65,6,0	1/1:2,0:2:6.01:61,6,0
chr10	29325556	.	A	AGTGTGTGC	1166.13	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.082;DP=792;FS=0.000;HRun=0;HaplotypeScore=199.4373;InbreedingCoeff=0.9906;MQ=70.34;MQ0=2;MQRankSum=-6.480;QD=23.80;ReadPosRankSum=-1.221;VQSLOD=3.0373;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:14,31:48:47.55:1261,48,0	0/0:10,0:10:27.08:0,27,623	0/0:32,0:26:49.30:0,49,890	0/0:26,0:20:22.77:0,23,421	0/0:27,0:27:69.24:0,69,1765	0/0:26,0:26:69.24:0,69,1779	0/0:37,0:37:90.31:0,90,2266	0/0:28,0:28:25.99:0,26,1260	0/0:25,0:25:63.20:0,63,1587	0/0:28,0:28:72.24:0,72,1738	0/0:16,0:16:42.14:0,42,1018	0/0:47,0:47:99:0,114,2556	0/0:33,0:33:75.24:0,75,1913	0/0:33,0:33:81.25:0,81,2021	0/0:36,0:36:75.23:0,75,1852	0/0:39,0:39:99:0,99,2366	0/0:29,0:29:75.26:0,75,1942	0/0:12,0:12:33.11:0,33,866	0/0:15,0:15:24.04:0,24,490	0/0:24,0:24:63.20:0,63,1546	0/0:54,0:54:99:0,126,3142	0/0:26,0:26:66.20:0,66,1621	0/0:15,0:15:36.12:0,36,923	0/0:36,0:36:90.28:0,90,2182	0/0:24,0:23:54.17:0,54,1305	0/0:30,0:30:75.26:0,75,1937	0/0:27,0:27:72.25:0,72,1804	0/0:8,0:8:24.08:0,24,605
chr10	29325979	.	C	CA	1544.89	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=10.110;DP=702;FS=2.018;HRun=4;HaplotypeScore=120.9902;InbreedingCoeff=0.9956;MQ=80.77;MQ0=0;MQRankSum=-4.662;QD=35.93;ReadPosRankSum=1.683;VQSLOD=2.4025;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,38:43:99:1640,120,0	0/0:10,0:10:27.08:0,27,306	0/0:19,0:19:49.52:0,50,507	0/0:15,0:16:26.68:0,27,300	0/0:36,0:36:96.25:0,96,1079	0/0:24,0:24:69.18:0,69,773	0/0:29,0:29:81.21:0,81,909	0/0:29,0:29:75.20:0,75,843	0/0:28,0:28:84.24:0,84,953	0/0:34,0:34:96.26:0,96,1074	0/0:32,0:32:93.27:0,93,1055	0/0:27,0:27:75.21:0,75,851	0/0:20,0:20:60.17:0,60,679	0/0:19,0:19:57.15:0,57,637	0/0:24,0:24:69.20:0,69,783	0/0:32,0:32:90.25:0,90,1018	0/0:28,0:28:84.22:0,84,942	0/0:11,0:11:33.09:0,33,374	0/0:19,0:18:48.13:0,48,537	0/0:28,0:28:84.24:0,84,953	0/0:22,0:22:63.18:0,63,714	0/0:24,0:24:66.17:0,66,739	0/0:22,0:22:66.19:0,66,748	0/0:26,0:26:63.18:0,63,714	0/0:24,0:24:69.20:0,69,783	0/0:36,1:37:64.24:0,64,1108	0/0:31,0:31:87.24:0,87,986	0/0:8,0:8:24.07:0,24,272
chr10	29326051	.	G	GC	984.84	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=1.148;DP=685;FS=17.538;HRun=0;HaplotypeScore=89.0482;InbreedingCoeff=0.9837;MQ=81.50;MQ0=0;MQRankSum=-4.548;QD=32.83;ReadPosRankSum=2.509;VQSLOD=2.2279;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,29:30:69.22:1080,69,0	0/0:12,0:12:33.06:0,33,421	0/0:24,0:24:60.20:0,60,838	0/0:12,0:12:30.06:0,30,397	0/0:39,0:39:99:0,114,1594	0/0:25,0:25:75.25:0,75,1049	0/0:24,0:24:69.16:0,69,892	0/0:23,0:23:66.20:0,66,908	0/0:18,0:18:54.18:0,54,754	0/0:30,0:30:90.30:0,90,1259	0/0:27,0:27:81.26:0,81,1116	0/0:31,0:31:93.30:0,93,1283	0/0:19,0:19:54.18:0,54,755	0/0:30,0:30:87.29:0,87,1217	0/0:43,0:43:99:0,126,1743	0/0:25,0:25:72.24:0,72,1006	0/0:27,0:27:81.23:0,81,1096	0/0:16,0:16:45.15:0,45,629	0/0:20,0:20:60.20:0,60,839	0/0:33,0:33:99:0,99,1367	0/0:20,0:20:60.20:0,60,839	0/0:26,0:26:78.26:0,78,1089	0/0:25,0:25:75.24:0,75,1026	0/0:16,0:16:42.12:0,42,569	0/0:22,0:22:66.22:0,66,923	0/0:34,0:34:99:0,102,1383	0/0:29,0:29:75.24:0,75,1031	0/0:5,0:5:15.05:0,15,210
chr10	29326143	.	CT	C	205.12	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.412;DP=654;FS=1.019;HRun=1;HaplotypeScore=69.6236;InbreedingCoeff=0.9907;MQ=78.36;MQ0=0;MQRankSum=-2.758;QD=11.40;ReadPosRankSum=-4.321;VQSLOD=0.2515;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,7:18:35.59:300,36,0	0/0:17,0:17:51.15:0,51,672	0/0:32,0:28:56.54:0,57,705	0/0:20,0:18:26.93:0,27,278	0/0:23,0:23:69.12:0,69,899	0/0:27,0:27:81.21:0,81,1085	0/0:24,0:24:72.22:0,72,969	0/0:21,0:21:63.12:0,63,728	0/0:23,0:23:69.20:0,69,916	0/0:31,0:31:90.25:0,90,1203	0/0:21,0:21:59.85:0,60,780	0/0:25,0:25:75.18:0,75,960	0/0:33,0:33:99:0,99,1333	0/0:21,0:21:60.11:0,60,795	0/0:33,0:33:96.27:0,96,1278	0/0:29,0:29:87.22:0,87,1138	0/0:26,0:26:78.23:0,78,1062	0/0:13,0:13:39.08:0,39,486	0/0:19,0:19:54.16:0,54,722	0/0:21,0:21:60.19:0,60,809	0/0:28,0:28:84.16:0,84,1078	0/0:20,0:20:60.16:0,60,776	0/0:26,0:26:78.22:0,78,1037	0/0:23,0:23:69.10:0,69,894	0/0:22,0:22:66.21:0,66,896	0/0:21,0:21:60.17:0,60,803	0/0:31,0:31:90.21:0,90,1169	0/0:6,0:6:18.01:0,18,197
chr10	29327031	.	TTTCCTTCCTTCCTTCCTC	T	1717.52	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=-10.593;DP=721;FS=1.229;HRun=0;HaplotypeScore=434.9648;InbreedingCoeff=0.2180;MQ=70.53;MQ0=5;MQRankSum=-2.480;QD=11.84;ReadPosRankSum=-3.514;VQSLOD=0.4519;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,24:28:48.08:1800,48,0	0/0:10,0:10:27.09:0,27,1169	0/0:33,0:22:51.10:0,51,2911	0/0:26,0:24:27.01:0,27,1205	0/0:24,0:24:66.23:0,66,2959	0/1:20,0:20:3.87:4,0,1739	0/0:33,0:33:9.89:0,10,2256	0/1:41,0:41:6.04:6,0,2369	0/0:21,0:21:24.30:0,24,1993	0/0:28,0:28:78.03:0,78,3154	0/1:22,0:22:12.38:12,0,1965	0/1:30,0:30:7.10:7,0,2717	0/0:30,0:30:23.26:0,23,2693	0/0:25,0:25:57.13:0,57,2481	0/0:37,0:37:46.25:0,46,3065	0/0:33,0:33:45.09:0,45,3144	0/0:25,0:25:46.04:0,46,1990	0/0:15,0:15:10.13:0,10,1269	0/0:24,0:24:19.35:0,19,1435	0/0:25,0:25:35.79:0,36,2457	0/0:33,0:33:54.09:0,54,2296	0/0:22,0:22:54.10:0,54,2270	0/0:19,0:19:36.59:0,37,1640	0/0:35,0:35:20.54:0,21,2879	0/0:19,0:19:11.29:0,11,1513	0/0:28,0:28:46.76:0,47,3113	0/0:31,0:31:43.30:0,43,3049	0/1:4,0:4:9.87:10,0,410
chr10	29327047	.	CTCT	C	23398.10	PASS	AB=1.000;AC=51;AF=0.911;AN=56;BaseQRankSum=1.886;DP=723;FS=14.253;HRun=0;HaplotypeScore=159.4746;InbreedingCoeff=0.7604;MQ=64.67;MQ0=5;MQRankSum=-4.207;QD=35.13;ReadPosRankSum=7.338;VQSLOD=4.4039;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:24:67.34:103,0,67	1/1:1,10:11:30.10:501,30,0	0/0:38,0:26:74.89:0,75,1372	0/0:19,0:15:35.41:0,35,603	1/1:0,29:29:72.24:1178,72,0	1/1:2,17:19:39.13:664,39,0	1/1:2,30:32:57.19:955,57,0	1/1:4,33:37:99:1460,99,0	1/1:1,20:21:48.16:800,48,0	1/1:1,28:29:87.27:1371,87,0	1/1:2,20:22:57.19:922,57,0	1/1:1,28:29:63.22:1063,63,0	1/1:4,30:34:66.20:1088,66,0	1/1:0,25:25:57.17:942,57,0	1/1:0,38:38:69.14:1174,69,0	1/1:1,31:32:69.24:1175,69,0	1/1:1,23:24:44.99:758,45,0	1/1:1,17:18:33.04:520,33,0	1/1:1,17:18:51.14:748,51,0	1/1:1,24:25:69.23:1125,69,0	1/1:2,28:30:53.98:904,54,0	1/1:1,23:24:57.19:943,57,0	1/1:2,18:20:38.74:648,39,0	1/1:3,33:36:66.23:1110,66,0	1/1:2,22:24:39.13:648,39,0	1/1:0,28:28:81.24:1287,81,0	1/1:2,31:34:69.23:1155,69,0	1/1:0,3:3:9.03:153,9,0
chr10	29327048	.	T	TC	5515.58	PASS	AB=1.000;AC=51;AF=0.911;AN=56;BaseQRankSum=2.950;DP=719;FS=53.487;HRun=2;HaplotypeScore=201.0089;InbreedingCoeff=0.7960;MQ=66.02;MQ0=5;MQRankSum=-3.189;QD=8.36;ReadPosRankSum=6.235;VQSLOD=-0.0224;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:24:3.69:4,0,100	1/1:10,1:11:16.92:121,17,0	0/0:39,0:27:75.03:0,75,897	0/0:20,0:16:35.96:0,36,401	1/1:29,0:29:36.05:255,36,0	1/1:18,0:18:19.10:87,19,0	1/1:31,1:32:33.12:262,33,0	1/1:36,0:36:79.79:874,80,0	1/1:20,1:21:27.04:179,27,0	1/1:28,1:29:54.07:456,54,0	1/1:21,1:22:39.41:359,39,0	1/1:28,1:29:27.58:119,28,0	1/1:30,2:32:34.89:225,35,0	1/1:25,0:25:29.29:170,29,0	1/1:38,0:38:36.51:200,37,0	1/1:31,0:31:29.66:112,30,0	1/1:24,0:24:26.04:139,26,0	1/1:17,1:18:16.08:86,16,0	1/1:17,0:17:37.80:353,38,0	1/1:24,1:25:38.02:329,38,0	1/1:30,0:30:32.16:227,32,0	1/1:23,1:24:33.53:225,34,0	1/1:19,1:20:18.75:112,19,0	1/1:34,2:36:31.46:141,31,0	1/1:22,2:24:20.66:141,21,0	1/1:28,0:28:38.60:197,39,0	1/1:34,0:34:31.91:136,32,0	1/1:3,0:3:3.74:9,4,0
chr10	29328041	.	C	CGTGTGTGT	3647.22	PASS	AB=0.789;AC=40;AF=0.952;AN=42;BaseQRankSum=-0.767;DP=314;FS=0.000;HRun=0;HaplotypeScore=81.3787;InbreedingCoeff=0.0634;MQ=54.73;MQ0=13;MQRankSum=-0.301;QD=14.83;ReadPosRankSum=2.001;VQSLOD=1.2667;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:27:17.12:17,0,20	./.	./.	./.	./.	1/1:4,0:4:3:25,3,0	1/1:13,0:12:7.27:139,7,0	1/1:16,0:16:5.23:48,5,0	./.	1/1:7,0:7:13.27:206,13,0	./.	1/1:7,0:7:15.03:364,15,0	1/1:3,0:3:3.44:21,3,0	1/1:12,0:11:11.15:174,11,0	1/1:5,0:9:2.55:89,3,0	1/1:9,0:8:6.02:115,6,0	1/1:21,0:21:29.88:599,30,0	1/1:11,0:10:17.95:199,18,0	1/1:11,0:9:9.02:181,9,0	1/1:11,0:11:15.04:339,15,0	1/1:27,0:24:23.98:442,24,0	1/1:7,0:9:2.69:89,3,0	1/1:11,0:11:12.01:213,12,0	./.	0/1:3,7:10:0:1,0,0	1/1:8,0:7:12:272,12,0	1/1:9,0:14:7.44:106,7,0	1/1:2,0:2:2.22:7,2,0
chr10	29329679	.	TG	T	14421.60	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=8.407;DP=653;FS=11.726;HRun=7;HaplotypeScore=68.8131;InbreedingCoeff=0.9875;MQ=78.21;MQ0=0;MQRankSum=-4.572;QD=26.91;ReadPosRankSum=2.406;VQSLOD=4.9852;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:60.18:0,60,741	1/1:0,8:8:24.05:244,24,0	0/0:19,0:19:44.99:0,45,509	0/0:11,0:11:25.39:0,25,229	1/1:2,28:30:78.17:796,78,0	1/1:2,13:15:38.89:397,39,0	1/1:3,22:25:60.14:612,60,0	1/1:2,36:38:99:1094,108,0	0/0:14,0:14:39.12:0,39,490	1/1:3,16:19:48.11:490,48,0	1/1:3,19:22:48.11:490,48,0	1/1:3,13:16:33.07:337,33,0	1/1:2,19:21:54.12:551,54,0	1/1:1,30:31:87.20:887,87,0	1/1:4,34:38:99:1041,102,0	1/1:0,30:30:81.18:826,81,0	0/0:31,0:31:87.26:0,87,1080	0/0:22,0:22:63.20:0,63,793	1/1:1,18:19:54.10:542,54,0	1/1:3,31:34:81.17:826,81,0	1/1:3,29:32:84.19:857,84,0	1/1:2,19:21:51.11:520,51,0	1/1:1,24:25:72.16:730,72,0	1/1:0,16:16:42.10:429,42,0	1/1:3,26:29:81.18:826,81,0	1/1:1,27:28:81.18:826,81,0	1/1:1,35:36:99:1010,99,0	1/1:0,3:3:9.02:92,9,0
chr10	29329686	.	GT	G	2442.50	PASS	AB=1.000;AC=37;AF=0.661;AN=56;BaseQRankSum=15.091;DP=650;FS=0.728;HRun=1;HaplotypeScore=106.8685;InbreedingCoeff=0.3775;MQ=76.07;MQ0=0;MQRankSum=-2.378;QD=4.57;ReadPosRankSum=6.021;VQSLOD=0.4051;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:72.16:0,72,966	1/1:8,0:8:18.39:78,18,0	0/0:18,0:18:51.09:0,51,672	0/0:9,0:9:6.98:0,7,223	1/1:28,0:28:59.55:206,60,0	1/1:15,0:15:5.92:56,6,0	1/1:24,0:24:2.02:112,2,0	0/1:39,0:39:29.27:47,0,29	0/0:15,0:15:45.12:0,45,616	0/1:18,0:18:27.34:32,0,27	0/1:22,0:22:24.57:63,0,25	0/1:15,0:15:18.90:63,0,19	0/1:22,0:22:16:130,0,16	1/1:31,0:31:45.86:203,46,0	1/1:37,1:38:11.10:182,11,0	1/1:32,0:32:16.66:144,17,0	0/0:28,0:28:84.28:0,84,1226	0/0:21,0:21:63.21:0,63,912	0/1:21,0:21:27.06:27,0,45	1/1:31,1:32:31.92:197,32,0	1/1:30,0:30:38.59:157,39,0	1/1:20,0:20:15.65:95,16,0	1/1:24,1:25:54.35:206,54,0	0/1:18,0:18:10.27:63,0,10	1/1:27,1:28:38.98:209,39,0	1/1:28,1:29:21.78:116,22,0	1/1:37,0:36:34.94:228,35,0	1/1:3,0:3:6.94:22,7,0
chr10	29334870	.	TC	T	10869.87	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-1.856;DP=594;FS=30.351;HRun=10;HaplotypeScore=64.9304;InbreedingCoeff=0.9977;MQ=80.37;MQ0=1;MQRankSum=-4.064;QD=20.32;ReadPosRankSum=4.752;VQSLOD=3.6096;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:20:41.92:0,42,429	1/1:5,7:12:23.99:208,24,0	0/0:19,0:20:34.95:0,35,309	0/0:18,0:18:24.23:0,24,315	1/1:5,10:15:26.98:234,27,0	1/1:3,25:28:62.97:547,63,0	1/1:4,18:22:44.98:391,45,0	1/1:10,21:31:53.88:461,54,0	1/1:1,18:19:53.99:469,54,0	1/1:3,14:17:32.95:286,33,0	1/1:1,14:15:38.99:339,39,0	1/1:3,21:24:59.98:521,60,0	1/1:5,18:23:47.98:417,48,0	1/1:3,25:28:74.97:651,75,0	1/1:2,26:28:74.98:651,75,0	1/1:3,19:22:50.67:442,51,0	1/1:1,11:12:29.99:260,30,0	1/1:0,13:13:38.99:339,39,0	1/1:4,22:26:65.95:566,66,0	1/1:3,18:21:44.97:391,45,0	1/1:2,25:29:70.05:584,70,0	1/1:2,16:18:50.93:435,51,0	1/1:3,19:22:47.96:416,48,0	1/1:2,14:16:38.99:339,39,0	1/1:5,25:30:71.98:625,72,0	1/1:3,14:17:41.98:364,42,0	1/1:4,27:31:68.97:597,69,0	1/1:0,15:15:38.98:339,39,0
chr10	29336280	.	A	AGGCTCTC	38017.65	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-3.238;DP=600;FS=1.149;HRun=0;HaplotypeScore=164.8960;InbreedingCoeff=0.9868;MQ=76.61;MQ0=1;MQRankSum=-16.653;QD=85.63;ReadPosRankSum=-1.781;VQSLOD=4.8678;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,132,3251	1/1:4,5:10:24.08:945,24,0	0/0:23,0:23:57.18:0,57,1270	0/0:18,0:18:42.05:0,42,885	1/1:8,14:25:45.15:1715,45,0	1/1:5,16:21:57.20:2214,57,0	1/1:6,12:21:48.16:1769,48,0	1/1:12,8:22:60.21:2135,60,0	0/0:16,0:16:48.16:0,48,1169	1/1:12,5:18:42.14:1470,42,0	1/1:9,9:18:42.14:1622,42,0	1/1:8,15:26:57.20:2166,57,0	1/1:8,25:34:86.97:3162,87,0	1/1:11,12:26:54.19:2071,54,0	1/1:8,23:36:84.29:3315,84,0	1/1:6,14:25:54.18:2016,54,0	0/0:35,0:35:99:0,99,2539	0/0:20,0:20:60.19:0,60,1481	1/1:9,4:13:36.12:1335,36,0	1/1:5,9:16:30.10:1180,30,0	1/1:5,8:13:21.07:820,21,0	1/1:7,7:16:33.11:1219,33,0	1/1:7,8:17:39.06:1439,39,0	1/1:7,8:16:33.11:1301,33,0	1/1:3,9:15:33.11:1259,33,0	1/1:18,10:33:87.23:2622,87,0	1/1:4,15:19:51.18:1894,51,0	1/1:2,1:3:9.03:350,9,0
chr10	29336674	.	TACACAC	T	2604.06	PASS	AB=0.773;AC=35;AF=0.729;AN=48;BaseQRankSum=4.497;DP=531;FS=9.355;HRun=0;HaplotypeScore=109.9961;InbreedingCoeff=0.5064;MQ=71.69;MQ0=12;MQRankSum=-4.956;QD=7.82;ReadPosRankSum=-0.717;VQSLOD=1.4750;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:28:3.80:4,0,53	./.	./.	./.	0/1:6,3:9:0:0,0,0	1/1:13,5:19:9.03:163,9,0	1/1:14,7:22:9.04:181,9,0	./.	0/0:12,0:13:9.03:0,9,122	1/1:8,5:15:18.02:253,18,0	1/1:6,2:8:3.01:61,3,0	1/1:8,4:13:7.52:124,8,0	1/1:10,4:15:6.90:123,7,0	1/1:7,1:11:12.04:193,12,0	1/1:10,7:18:20.28:363,20,0	0/1:19,12:31:11.90:515,0,12	0/0:20,0:25:33.09:0,33,740	0/0:18,0:18:17.85:0,18,390	1/1:13,2:14:5.52:104,6,0	1/1:11,6:17:5.68:121,6,0	1/1:22,0:21:6.32:96,6,0	1/1:18,1:19:12.02:176,12,0	1/1:9,6:15:3.01:61,3,0	1/1:28,4:32:2.67:36,3,0	1/1:9,7:16:9.03:182,9,0	0/0:21,0:22:10.21:0,10,128	0/0:13,0:14:3.67:0,4,26	1/1:4,0:5:1.77:4,2,0
chr10	29337178	.	C	CTT	14584.45	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=17.977;DP=519;FS=2.413;HRun=2;HaplotypeScore=208.4858;InbreedingCoeff=0.9765;MQ=96.71;MQ0=0;MQRankSum=-17.026;QD=42.52;ReadPosRankSum=3.875;VQSLOD=4.7892;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:96.32:0,96,1538	1/1:2,10:12:36.12:536,36,0	0/0:33,0:33:96.29:0,96,1456	0/0:32,0:32:88.49:0,88,1288	1/1:1,21:22:57.14:783,57,0	1/1:3,19:22:66.21:947,66,0	1/1:2,13:15:45.15:658,45,0	1/1:1,12:13:39.13:568,39,0	0/0:22,0:22:65.57:0,66,1002	1/1:1,16:17:51.17:766,51,0	1/1:1,15:16:47.95:650,48,0	1/1:2,22:24:72.24:1043,72,0	1/1:0,18:18:54.18:775,54,0	1/1:2,13:15:42.07:581,42,0	1/1:1,22:23:69.23:995,69,0	1/1:2,15:17:51.17:749,51,0	0/0:33,0:33:99:0,99,1580	0/0:23,0:23:69.24:0,69,1121	1/1:0,7:7:21.07:310,21,0	1/1:0,22:22:66.22:953,66,0	1/1:2,4:6:18.06:258,18,0	1/1:1,14:15:45.15:658,45,0	1/1:1,13:14:39.13:549,39,0	1/1:1,10:11:30.09:414,30,0	1/1:1,17:18:54.18:784,54,0	1/1:1,15:16:48.16:709,48,0	1/1:1,17:18:54.18:809,54,0	1/1:0,2:2:6.02:89,6,0
chr10	29337179	.	A	AG	7033.93	PASS	AB=0.600;AC=43;AF=0.768;AN=56;BaseQRankSum=18.157;DP=517;FS=7.220;HRun=0;HaplotypeScore=228.6075;InbreedingCoeff=0.8919;MQ=93.70;MQ0=0;MQRankSum=-17.758;QD=20.33;ReadPosRankSum=6.326;VQSLOD=4.3439;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:99:0,99,1364	1/1:2,10:12:22.34:230,22,0	0/0:31,0:31:93.27:0,93,1238	0/0:29,0:29:84.25:0,84,1141	1/1:1,21:22:40.24:334,40,0	1/1:2,19:21:59.65:456,60,0	1/1:3,13:16:30.52:292,31,0	1/1:1,12:13:35.17:263,35,0	0/0:21,0:21:63.19:0,63,849	1/1:1,16:17:47.88:387,48,0	1/1:1,15:16:37.78:296,38,0	1/1:2,22:24:58.88:503,59,0	1/1:0,18:18:53.67:406,54,0	1/1:0,14:14:41.82:323,42,0	1/1:2,22:24:68.79:543,69,0	1/1:3,15:18:31.09:334,31,0	0/0:34,0:34:99:0,99,1385	0/0:23,0:23:69.23:0,69,964	1/1:0,7:7:20.97:172,21,0	1/1:0,22:22:65.75:508,66,0	0/1:2,4:6:7.92:55,0,8	1/1:2,14:16:41.22:308,41,0	1/1:0,13:13:38.40:280,38,0	1/1:2,10:12:23.39:166,23,0	1/1:1,17:18:45.49:391,45,0	1/1:1,15:16:44.88:356,45,0	1/1:2,16:19:43.91:383,44,0	1/1:0,2:2:5.98:46,6,0
chr10	29337180	.	C	CT	2573.57	PASS	AB=0.600;AC=43;AF=0.768;AN=56;BaseQRankSum=17.799;DP=515;FS=3.972;HRun=0;HaplotypeScore=242.6301;InbreedingCoeff=0.8952;MQ=93.79;MQ0=0;MQRankSum=-16.926;QD=7.50;ReadPosRankSum=5.876;VQSLOD=3.3688;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,99,1380	1/1:1,10:11:17.92:77,18,0	0/0:32,0:32:93.26:0,93,1248	0/0:28,0:28:81.20:0,81,1084	1/1:2,21:23:26.33:109,26,0	1/1:2,19:21:44.32:181,44,0	1/1:2,13:15:27.15:116,27,0	1/1:1,12:13:29.11:138,29,0	0/0:20,0:20:60.20:0,60,838	1/1:1,16:17:43.25:209,43,0	1/1:1,15:16:29.52:97,30,0	1/1:1,22:23:46:169,46,0	1/1:0,18:18:40.32:145,40,0	1/1:1,14:15:30.51:103,31,0	1/1:2,22:24:55.48:202,55,0	1/1:3,15:18:28.60:136,29,0	0/0:35,0:35:99:0,102,1408	0/0:23,0:23:69.23:0,69,964	1/1:0,7:7:19.59:98,20,0	1/1:0,22:22:52.94:185,53,0	0/1:2,4:6:5.61:14,0,6	1/1:1,14:15:35.61:131,36,0	1/1:0,13:13:27.95:87,28,0	1/1:1,10:11:14.02:48,14,0	1/1:1,17:18:36.86:135,37,0	1/1:1,15:16:41.15:184,41,0	1/1:3,16:19:35.05:178,35,0	1/1:0,2:2:5.60:26,6,0
chr10	29337183	.	AC	A	7433.88	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=17.656;DP=513;FS=1.972;HRun=1;HaplotypeScore=223.9235;InbreedingCoeff=0.9712;MQ=93.88;MQ0=0;MQRankSum=-17.011;QD=21.74;ReadPosRankSum=4.020;VQSLOD=4.8525;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,105,1582	1/1:0,10:10:29.79:220,30,0	0/0:34,0:34:96.28:0,96,1427	0/0:26,0:26:69.19:0,69,1057	1/1:1,21:22:53.50:370,54,0	1/1:4,19:23:68.72:539,69,0	1/1:2,13:15:44.72:329,45,0	1/1:0,14:14:41.75:357,42,0	0/0:19,0:19:57.19:0,57,903	1/1:2,16:18:53.87:472,54,0	1/1:0,15:15:42.79:280,43,0	1/1:1,22:23:68.45:515,68,0	1/1:1,18:19:56.21:413,56,0	1/1:1,14:15:41.46:290,41,0	1/1:1,22:23:68.56:502,69,0	1/1:1,15:16:47.71:352,48,0	0/0:35,0:35:99:0,105,1635	0/0:22,0:22:66.23:0,66,1055	1/1:0,7:7:20.97:180,21,0	1/1:1,22:23:68.41:498,68,0	1/1:2,4:6:11.93:90,12,0	1/1:1,14:15:44.64:318,45,0	1/1:1,13:14:41.62:305,42,0	1/1:1,10:11:22.86:154,23,0	1/1:1,17:18:53.70:397,54,0	1/1:0,15:15:44.96:376,45,0	1/1:1,17:18:53.76:425,54,0	1/1:0,2:2:6:51,6,0
chr10	29339790	.	A	AT	1095.81	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-7.834;DP=625;FS=5.052;HRun=8;HaplotypeScore=56.7952;InbreedingCoeff=0.9436;MQ=72.21;MQ0=0;MQRankSum=-0.217;QD=25.48;ReadPosRankSum=1.177;VQSLOD=4.5607;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,37:43:87.93:1191,88,0	0/0:13,0:13:36.01:0,36,330	0/0:12,0:11:9.98:0,10,162	0/0:10,0:10:24.01:0,24,220	0/0:22,0:22:63.03:0,63,576	0/0:22,0:22:60.03:0,60,549	0/0:14,0:14:38.99:0,39,347	0/0:31,0:31:69.02:0,69,631	0/0:22,0:22:50.07:0,50,465	0/0:18,0:18:47.99:0,48,431	0/0:14,0:14:39.02:0,39,357	0/0:23,0:23:57.02:0,57,521	0/0:22,0:22:54:0,54,489	0/0:21,1:22:25.41:0,25,487	0/0:33,0:33:93.03:0,93,847	0/0:26,0:26:63.01:0,63,576	0/0:32,0:32:87.04:0,87,796	0/0:25,0:25:69.02:0,69,626	0/0:16,0:15:33:0,33,302	0/0:23,0:23:66.04:0,66,604	0/0:25,0:25:72.04:0,72,659	0/0:29,0:29:84.04:0,84,769	0/0:22,0:22:51.02:0,51,466	0/0:14,0:14:38.98:0,39,346	0/0:19,0:19:48.02:0,48,439	0/0:30,0:30:72.02:0,72,655	0/0:33,0:33:87.02:0,87,789	0/0:10,0:10:18.01:0,18,165
chr10	29340011	.	A	AC	14029.97	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-10.064;DP=628;FS=6.832;HRun=7;HaplotypeScore=64.6014;InbreedingCoeff=0.9884;MQ=57.59;MQ0=9;MQRankSum=3.832;QD=27.62;ReadPosRankSum=0.589;VQSLOD=5.5259;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:32:72.56:0,73,766	1/1:1,9:10:24.07:289,24,0	0/0:14,0:7:15.01:0,15,137	0/0:18,0:12:29.61:0,30,282	1/1:6,30:36:84.17:973,84,0	1/1:3,25:28:69.21:833,69,0	1/1:7,22:26:60.18:725,60,0	1/1:9,16:21:47.11:516,47,0	0/0:12,0:12:36.03:0,36,337	1/1:5,29:34:81.25:976,81,0	1/1:3,21:23:60.18:725,60,0	1/1:3,20:23:54.17:650,54,0	1/1:1,26:27:63.19:761,63,0	1/1:2,15:17:39.12:470,39,0	1/1:3,22:25:54.17:652,54,0	1/1:2,15:17:36.11:433,36,0	0/0:17,0:17:51.08:0,51,492	0/0:25,0:26:68.07:0,68,625	1/1:2,17:19:51.13:602,51,0	1/1:3,20:22:51.01:565,51,0	1/1:1,26:27:75.23:906,75,0	1/1:1,22:23:51.16:616,51,0	1/1:1,17:17:41.99:507,42,0	1/1:3,15:18:45.09:524,45,0	1/1:1,18:19:45.14:543,45,0	1/1:8,23:30:43.23:786,43,0	1/1:3,24:27:69.21:826,69,0	1/1:1,5:8:11.02:154,11,0
chr10	29340281	.	T	TGGTA	1830.66	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=0.824;DP=787;FS=2.738;HRun=0;HaplotypeScore=126.2783;InbreedingCoeff=0.9955;MQ=79.79;MQ0=1;MQRankSum=-5.092;QD=59.05;ReadPosRankSum=1.055;VQSLOD=5.5490;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,24:30:69.24:1926,69,0	0/0:10,0:10:30.10:0,30,629	0/0:25,0:25:75.24:0,75,1491	0/0:22,0:22:66.23:0,66,1340	0/0:29,0:29:87.30:0,87,1823	0/0:19,0:19:57.16:0,57,1114	0/0:30,0:30:87.30:0,87,1785	0/0:37,0:37:99:0,108,2120	0/0:31,0:31:93.32:0,93,1950	0/0:37,0:37:99:0,105,2118	0/0:21,0:21:57.18:0,57,1158	0/0:26,0:26:78.27:0,78,1619	0/0:38,0:38:99:0,111,2231	0/0:39,0:39:99:0,117,2450	0/0:35,0:35:99:0,105,2202	0/0:29,0:29:84.26:0,84,1681	0/0:28,0:27:84.29:0,84,1761	0/0:7,0:7:21.07:0,21,440	0/0:27,0:27:78.25:0,78,1595	0/0:26,0:26:75.24:0,75,1495	0/0:42,0:42:99:0,123,2564	0/0:22,0:22:66.23:0,66,1384	0/0:30,0:30:87.30:0,87,1817	0/0:26,0:26:75.21:0,75,1572	0/0:32,0:32:90.31:0,90,1882	0/0:38,0:38:99:0,111,2303	0/0:35,0:35:99:0,105,2121	0/0:15,0:15:45.13:0,45,902
chr10	29340632	.	CAAA	C	17909.71	PASS	AB=0.824;AC=47;AF=0.839;AN=56;BaseQRankSum=-2.612;DP=722;FS=6.601;HRun=12;HaplotypeScore=167.7073;InbreedingCoeff=0.9127;MQ=67.80;MQ0=0;MQRankSum=-1.940;QD=29.31;ReadPosRankSum=2.678;VQSLOD=2.4338;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:47:92.74:0,93,860	1/1:0,11:11:30.10:379,30,0	0/1:11,0:13:3.07:3,0,292	0/0:20,0:18:23.44:0,23,461	1/1:3,25:29:63.03:776,63,0	1/1:0,21:21:57.18:720,57,0	1/1:4,16:20:42.11:531,42,0	1/1:8,29:37:87.15:1085,87,0	1/1:6,35:43:99:1288,103,0	1/1:6,19:28:61.57:743,62,0	1/1:4,14:18:39.06:492,39,0	1/1:4,30:34:90.27:1137,90,0	1/1:3,25:28:69.20:871,69,0	1/1:4,27:32:81.17:999,81,0	1/1:5,30:35:81.23:1024,81,0	1/1:4,26:30:75.22:948,75,0	0/0:4,0:29:56.86:0,57,529	0/0:2,0:15:26.92:0,27,242	1/1:3,19:22:57.07:699,57,0	1/1:3,23:26:50.31:762,50,0	1/1:1,20:21:54.11:664,54,0	1/1:3,21:25:55.71:715,56,0	1/1:2,19:21:48.14:607,48,0	1/1:3,23:26:60.18:758,60,0	1/1:3,23:28:60.32:791,60,0	1/1:5,20:25:60.14:745,60,0	1/1:5,21:26:60.12:758,60,0	1/1:0,11:11:33.11:417,33,0
chr10	29341395	.	ATCTCTCTC	A	624.30	PASS	AB=0.845;AC=24;AF=0.667;AN=36;BaseQRankSum=-0.859;DP=210;FS=0.000;HRun=0;HaplotypeScore=62.4454;InbreedingCoeff=0.1801;MQ=86.32;MQ0=8;MQRankSum=-0.155;QD=6.44;ReadPosRankSum=0.775;VQSLOD=1.0781;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	0/0:22,0:13:2.13:0,2,4	1/1:5,0:5:3:25,3,0	0/0:9,0:9:10.61:0,11,61	1/1:8,0:8:2.99:24,3,0	1/1:11,3:14:9.02:171,9,0	0/0:4,0:4:6.02:0,6,200	0/1:7,0:7:18.05:18,0,26	./.	./.	0/1:4,4:8:0:0,0,0	./.	1/1:5,0:5:5.99:50,6,0	1/1:2,4:6:3.01:70,3,0	1/1:7,0:8:3.95:67,4,0	0/1:5,1:6:35.41:66,0,35	1/1:6,0:6:2.99:24,3,0	0/0:7,3:10:4.53:0,5,29	./.	./.	./.	./.	0/1:5,0:6:27.82:28,0,66	1/1:2,0:2:3.01:53,3,0	1/1:5,0:8:7.47:109,7,0	1/1:6,0:7:3.01:38,3,0
chr10	29342128	.	G	GCCA	1291.85	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.569;DP=616;FS=4.255;HRun=0;HaplotypeScore=98.2131;InbreedingCoeff=0.9993;MQ=92.86;MQ0=1;MQRankSum=-7.496;QD=61.52;ReadPosRankSum=1.558;VQSLOD=5.6470;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:25:60.19:0,60,1088	0/0:10,0:10:30.06:0,30,504	0/0:27,0:27:81.28:0,81,1459	0/0:30,0:29:75.15:0,75,1312	0/0:29,0:29:78.27:0,78,1452	0/0:21,0:21:57.16:0,57,999	0/0:17,0:16:45.15:0,45,836	0/0:44,0:44:99:0,126,2282	1/1:0,21:21:63.22:1387,63,0	0/0:20,0:20:60.21:0,60,1119	0/0:21,0:21:63.22:0,63,1175	0/0:23,0:23:69.18:0,69,1249	0/0:18,0:18:54.17:0,54,965	0/0:16,0:16:45.14:0,45,799	0/0:30,0:30:84.29:0,84,1566	0/0:24,0:24:63.22:0,63,1167	0/0:20,0:20:60.21:0,60,1118	0/0:21,0:21:63.20:0,63,1141	0/0:23,0:23:69.24:0,69,1283	0/0:23,0:23:66.23:0,66,1216	0/0:14,0:14:39.13:0,39,727	0/0:14,0:14:42.14:0,42,783	0/0:19,0:19:54.19:0,54,1007	0/0:23,0:23:63.22:0,63,1174	0/0:17,0:17:51.17:0,51,941	0/0:23,0:23:69.24:0,69,1329	0/0:23,0:23:69.19:0,69,1249	0/0:17,0:17:48.16:0,48,895
chr10	29342131	.	G	GA	846.64	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.796;DP=610;FS=2.848;HRun=0;HaplotypeScore=78.9966;InbreedingCoeff=0.9993;MQ=91.95;MQ0=1;MQRankSum=-7.520;QD=38.48;ReadPosRankSum=0.318;VQSLOD=3.8006;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:26:57.19:0,57,797	0/0:10,0:10:30.10:0,30,419	0/0:26,0:26:78.24:0,78,1068	0/0:28,0:28:72.12:0,72,904	0/0:27,0:27:75.24:0,75,1027	0/0:22,0:22:51.09:0,51,711	0/0:19,0:18:48.16:0,48,670	0/0:43,0:43:99:0,123,1691	1/1:1,21:22:66.22:942,66,0	0/0:21,0:21:60.20:0,60,838	0/0:21,0:21:63.21:0,63,881	0/0:23,0:23:69.23:0,69,964	0/0:16,0:16:48.16:0,48,671	0/0:14,0:14:39.12:0,39,528	0/0:30,0:30:87.29:0,87,1216	0/0:22,0:22:63.21:0,63,877	0/0:20,0:20:60.20:0,60,832	0/0:19,0:19:57.16:0,57,766	0/0:25,0:25:72.23:0,72,990	0/0:22,0:22:63.21:0,63,881	0/0:14,0:14:39.13:0,39,545	0/0:14,0:14:42.14:0,42,584	0/0:19,0:19:54.18:0,54,755	0/0:23,0:23:66.22:0,66,920	0/0:16,0:16:48.14:0,48,651	0/0:23,0:23:69.23:0,69,983	0/0:24,0:24:72.22:0,72,983	0/0:17,0:17:48.16:0,48,671
chr10	29342178	.	C	CGTGTGTGTGTGTGT	8227.62	PASS	AB=0.846;AC=41;AF=0.820;AN=50;BaseQRankSum=0.209;DP=648;FS=0.000;HRun=0;HaplotypeScore=237.5980;InbreedingCoeff=0.1082;MQ=55.26;MQ0=8;MQRankSum=-4.721;QD=14.56;ReadPosRankSum=-3.807;VQSLOD=3.0338;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:18,0:37:19.64:20,0,217	1/1:6,3:14:12.04:744,12,0	./.	./.	0/1:16,0:25:0:0,0,0	1/1:13,0:19:3.01:102,3,0	1/1:18,0:32:0.74:380,1,0	1/1:29,0:28:25.84:563,26,0	0/1:24,0:24:11.02:11,0,912	1/1:20,0:17:21.05:543,21,0	1/1:25,0:25:11.89:197,12,0	1/1:27,0:27:12.04:367,12,0	1/1:15,3:25:9.92:427,10,0	1/1:11,0:11:6.49:213,6,0	1/1:22,0:34:11.58:518,12,0	0/1:12,3:24:79.64:709,0,80	0/0:20,0:26:29.17:0,29,1327	0/1:25,0:26:99:146,0,797	1/1:14,0:14:12.03:368,12,0	1/1:16,0:22:3.01:164,3,0	0/1:14,0:13:0:0,0,0	1/1:14,1:22:6.02:267,6,0	1/1:18,2:23:12.04:648,12,0	0/1:25,1:29:37.87:294,0,38	1/1:9,1:18:6.02:290,6,0	1/1:13,0:22:27.52:743,28,0	1/1:23,0:22:18.06:513,18,0	./.
chr10	29342213	.	G	GTGTGTGTGTGTGTG	14013.17	PASS	AB=1.000;AC=46;AF=0.852;AN=54;BaseQRankSum=1.535;DP=614;FS=3.438;HRun=0;HaplotypeScore=242.2106;InbreedingCoeff=0.2523;MQ=62.46;MQ0=7;MQRankSum=-7.173;QD=25.07;ReadPosRankSum=-4.109;VQSLOD=3.4890;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:38,0:34:31.79:32,0,163	1/1:14,0:14:18.06:916,18,0	./.	0/1:26,0:20:0:0,0,0	1/1:23,0:23:12.04:547,12,0	1/1:14,0:14:9.03:450,9,0	1/1:32,0:32:15.65:508,16,0	1/1:32,0:31:23.51:540,24,0	0/1:24,0:24:10.92:11,0,912	1/1:23,0:21:28.32:744,28,0	1/1:18,0:18:21.06:600,21,0	1/1:25,0:25:23.65:887,24,0	1/1:20,0:20:27.09:1083,27,0	1/1:13,9:24:9.50:322,10,0	1/1:25,0:25:12.04:518,12,0	0/1:25,0:25:73.62:1039,0,74	0/0:24,0:24:20.34:0,20,1316	0/1:22,0:22:99:146,0,797	1/1:8,0:8:15.04:367,15,0	1/1:23,0:22:12.04:616,12,0	0/1:15,0:14:0:0,0,0	1/1:25,0:25:18.06:909,18,0	1/1:17,0:17:12.04:648,12,0	1/1:27,0:26:13.35:593,13,0	1/1:15,0:15:8.52:350,9,0	1/1:20,0:20:25.44:880,25,0	1/1:21,0:20:33.11:1152,33,0	1/1:2,0:2:3.01:156,3,0
chr10	29342623	.	T	TA	578.54	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=7.013;DP=652;FS=2.459;HRun=0;HaplotypeScore=70.7842;InbreedingCoeff=0.7687;MQ=71.23;MQ0=0;MQRankSum=-0.324;QD=8.77;ReadPosRankSum=2.406;VQSLOD=3.5957;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:72.20:0,72,963	0/0:9,0:9:27.09:0,27,371	0/1:31,0:19:29.81:30,0,339	0/0:20,0:14:14.62:0,15,218	0/0:34,0:34:99:0,102,1389	0/0:18,0:18:54.18:0,54,755	0/0:10,0:10:27.04:0,27,340	0/0:44,0:44:99:0,129,1769	0/0:23,0:23:66.17:0,66,843	0/0:29,0:29:84.28:0,84,1174	0/0:28,0:28:81.27:0,81,1125	0/0:24,0:24:72.24:0,72,1002	0/0:24,0:24:69.21:0,69,932	0/0:25,0:25:75.24:0,75,1029	0/0:19,0:19:57.17:0,57,763	0/0:16,0:16:45.14:0,45,608	1/1:1,18:19:34.84:360,35,0	1/1:1,15:16:17.23:316,17,0	0/0:10,0:10:30.10:0,30,416	0/0:36,0:35:99:0,102,1381	0/0:12,0:12:36.12:0,36,502	0/0:27,0:27:81.25:0,81,1092	0/0:29,0:29:84.27:0,84,1157	0/0:11,0:11:33.10:0,33,441	0/0:26,0:26:78.24:0,78,1054	0/0:32,0:32:84.26:0,84,1148	0/0:41,0:40:99:0,123,1655	0/0:15,0:15:45.11:0,45,575
chr10	29343092	.	AG	A	22636.33	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=9.806;DP=749;FS=1.411;HRun=1;HaplotypeScore=96.1270;InbreedingCoeff=0.9968;MQ=83.53;MQ0=0;MQRankSum=-4.643;QD=38.96;ReadPosRankSum=3.200;VQSLOD=5.2548;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:56:99:0,169,2634	1/1:0,19:19:57.19:797,57,0	0/0:20,0:20:60.15:0,60,870	0/0:21,0:21:45.72:0,46,746	1/1:0,26:26:78.26:1091,78,0	1/1:0,19:19:48.16:671,48,0	1/1:0,35:35:93.31:1301,93,0	1/1:0,33:33:99:1365,99,0	0/0:28,0:28:84.29:0,84,1340	1/1:0,23:23:69.20:943,69,0	1/1:0,18:18:48.16:671,48,0	1/1:0,35:35:96.32:1342,96,0	1/1:0,29:29:78.26:1091,78,0	1/1:0,39:39:99:1427,102,0	1/1:0,30:30:81.27:1133,81,0	1/1:0,27:27:72.24:999,72,0	0/0:20,0:20:60.20:0,60,956	0/0:23,0:23:69.24:0,69,1103	1/1:0,14:14:42.14:588,42,0	1/1:0,24:24:69.23:960,69,0	1/1:0,34:34:96.32:1343,96,0	1/1:0,23:23:66.22:923,66,0	1/1:0,30:30:85.17:1170,85,0	1/1:0,28:28:72.24:1007,72,0	1/1:0,28:28:75.25:1049,75,0	1/1:0,29:29:87.29:1214,87,0	1/1:0,32:32:96.32:1343,96,0	1/1:0,6:6:15.05:210,15,0
chr10	29343338	.	AT	A	16960.73	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-3.212;DP=668;FS=3.964;HRun=7;HaplotypeScore=65.2195;InbreedingCoeff=0.9972;MQ=76.89;MQ0=0;MQRankSum=-7.632;QD=26.54;ReadPosRankSum=5.497;VQSLOD=5.3246;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:1,35:36:96.22:979,96,0	1/1:1,9:10:27.06:275,27,0	0/0:20,0:20:51.15:0,51,621	0/0:9,0:9:21.06:0,21,247	1/1:1,25:26:75.17:765,75,0	1/1:0,26:26:66.15:673,66,0	1/1:4,26:30:75.17:765,75,0	1/1:4,32:36:96.21:979,96,0	1/1:1,15:16:45.10:459,45,0	1/1:1,36:37:99:1101,108,0	1/1:1,15:16:42.09:429,42,0	1/1:1,18:19:48.11:490,48,0	1/1:3,24:27:69.15:704,69,0	1/1:1,21:22:51.11:519,51,0	1/1:1,24:25:57.13:582,57,0	1/1:2,23:25:63.14:643,63,0	1/1:1,14:15:42.10:429,42,0	1/1:2,14:16:42.09:429,42,0	1/1:5,18:23:54.11:551,54,0	1/1:0,35:35:99:1071,105,0	1/1:0,14:14:33.08:337,33,0	1/1:1,18:19:48.11:490,48,0	1/1:4,19:23:48.05:490,48,0	1/1:0,20:20:54.12:551,54,0	1/1:1,25:26:69.15:704,69,0	1/1:3,31:34:93.15:925,93,0	1/1:3,35:38:99:1041,102,0	1/1:2,23:25:57.13:582,57,0
chr10	29344966	.	GA	G	2537.95	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=11.593;DP=560;FS=8.520;HRun=2;HaplotypeScore=56.9566;InbreedingCoeff=0.9974;MQ=86.43;MQ0=0;MQRankSum=-2.361;QD=35.75;ReadPosRankSum=1.491;VQSLOD=3.9035;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,21:21:54.18:755,54,0	0/0:8,0:8:24.08:0,24,384	0/0:20,0:20:56.62:0,57,862	0/0:17,0:17:39.18:0,39,742	0/0:17,0:17:51.16:0,51,792	0/0:24,0:24:69.24:0,69,1099	0/0:22,0:22:66.23:0,66,1055	0/0:42,0:42:99:0,123,1924	0/0:21,0:21:60.20:0,60,951	0/0:13,0:13:39.13:0,39,623	0/0:9,0:9:27.09:0,27,430	0/0:18,0:18:45.15:0,45,720	0/0:32,0:32:93.28:0,93,1438	0/0:28,0:28:84.29:0,84,1340	0/0:22,0:22:63.21:0,63,1007	0/0:20,0:20:60.20:0,60,959	1/1:0,28:28:72.71:1003,73,0	1/1:0,22:22:66.22:923,66,0	0/0:28,0:28:84.29:0,84,1338	0/0:14,0:14:42.14:0,42,671	0/0:16,0:16:45.15:0,45,720	0/0:16,0:16:45.15:0,45,719	0/0:14,0:14:42.14:0,42,671	0/0:18,0:18:54.17:0,54,840	0/0:8,0:8:24.08:0,24,384	0/0:27,0:27:81.27:0,81,1271	0/0:27,0:27:78.27:0,78,1247	0/0:8,0:8:24.08:0,24,383
chr10	29368623	.	G	GTA	541.12	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.768;DP=704;FS=14.713;HRun=0;HaplotypeScore=82.9357;InbreedingCoeff=0.9916;MQ=52.16;MQ0=11;MQRankSum=-0.402;QD=27.06;ReadPosRankSum=2.607;VQSLOD=3.7452;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,15:14:33.11:636,33,0	0/0:16,0:16:48.16:0,48,734	0/0:31,0:21:57.07:0,57,758	0/0:40,0:25:68.58:0,69,935	0/0:30,0:29:84.29:0,84,1283	0/0:35,0:35:96.31:0,96,1448	0/0:22,0:22:57.19:0,57,872	0/0:39,0:36:99:0,108,1633	0/0:44,0:44:99:0,120,1835	0/0:23,0:23:69.23:0,69,1036	0/0:21,0:21:51.17:0,51,772	0/0:27,0:26:75.25:0,75,1143	0/0:29,0:29:87.25:0,87,1305	0/0:20,0:20:54.18:0,54,826	0/0:23,0:23:66.22:0,66,1001	0/0:23,0:23:63.21:0,63,964	0/0:24,0:22:66.21:0,66,989	0/0:8,0:7:18.06:0,18,257	0/0:21,0:17:51.17:0,51,779	0/0:35,0:35:99:0,99,1493	0/0:23,0:22:66.21:0,66,989	0/0:20,0:19:54.18:0,54,826	0/0:35,0:34:96.33:0,96,1460	0/0:13,0:13:36.12:0,36,551	0/0:20,0:20:50.86:0,51,780	0/0:18,0:17:51.17:0,51,781	0/0:29,0:29:87.30:0,87,1330	0/0:14,0:14:39.13:0,39,597
chr10	29368853	.	GGT	G	339.35	PASS	AB=0.757;AC=4;AF=0.071;AN=56;BaseQRankSum=5.718;DP=676;FS=17.385;HRun=0;HaplotypeScore=58.5061;InbreedingCoeff=0.3002;MQ=45.70;MQ0=46;MQRankSum=-4.415;QD=5.14;ReadPosRankSum=1.070;VQSLOD=0.9522;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:6,12:14:12.77:293,0,13	0/0:10,0:9:21.07:0,21,384	0/0:37,3:5:15.05:0,15,242	0/0:32,4:5:12.04:0,12,188	0/0:21,0:20:21.07:0,21,385	0/0:28,0:27:54.19:0,54,988	0/0:25,0:23:15.03:0,15,244	0/0:25,0:20:54.19:0,54,990	0/1:38,4:35:99:106,0,776	0/0:13,0:11:30.10:0,30,550	0/0:26,0:26:33.11:0,33,604	0/0:31,0:28:50.55:0,51,909	0/0:19,0:19:30.56:0,31,551	0/0:13,0:12:21.07:0,21,377	0/0:35,0:35:66.23:0,66,1209	0/0:26,0:26:41.73:0,42,734	0/0:11,0:9:12.04:0,12,149	1/1:5,1:6:3.01:43,3,0	0/0:22,0:10:30.10:0,30,541	0/0:34,0:33:30.10:0,30,548	0/0:28,0:28:24.08:0,24,440	0/0:22,0:22:21.07:0,21,384	0/0:31,0:28:27.09:0,27,478	0/0:19,0:18:23.65:0,24,436	0/0:27,0:24:9.03:0,9,165	0/0:23,0:23:69.24:0,69,1245	0/0:30,0:30:54.13:0,54,983	0/0:15,0:14:15.05:0,15,275
chr10	29368887	.	GAT	G	151.06	PASS	AB=0.773;AC=2;AF=0.037;AN=54;BaseQRankSum=3.510;DP=705;FS=7.958;HRun=0;HaplotypeScore=44.9255;InbreedingCoeff=0.1799;MQ=35.05;MQ0=141;MQRankSum=-2.094;QD=2.65;ReadPosRankSum=-0.775;VQSLOD=0.1304;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:7,8:12:18.87:225,0,19	0/0:9,0:7:9.03:0,9,183	0/1:35,5:2:0:0,0,0	0/0:35,1:3:2.60:0,3,10	0/0:25,0:21:21.06:0,21,390	0/0:29,0:28:42.14:0,42,841	0/0:19,0:11:6.02:0,6,122	0/0:34,0:17:51.15:0,51,938	0/0:45,0:36:54.15:0,54,1004	0/0:23,0:15:45.14:0,45,876	0/0:26,0:23:21.07:0,21,425	0/0:25,0:22:29.87:0,30,501	0/0:19,0:17:8.60:0,9,182	0/0:17,0:14:18.06:0,18,364	0/0:35,0:35:57.20:0,57,1156	0/0:22,0:22:23.85:0,24,462	0/0:11,0:8:12.04:0,12,243	./.	0/0:23,0:11:33.11:0,33,669	0/0:45,0:34:24.08:0,24,472	0/0:25,0:21:9.03:0,9,182	0/0:30,0:23:12.04:0,12,241	0/0:33,0:26:18.06:0,18,365	0/0:20,0:16:15.04:0,15,269	0/0:30,0:18:6:0,6,85	0/0:26,0:24:71.81:0,72,1369	0/0:22,0:19:14.88:0,15,304	0/0:12,0:11:9.03:0,9,183
chr10	29368958	.	GTA	G	54.80	PASS	AB=0.930;AC=4;AF=0.091;AN=44;BaseQRankSum=3.299;DP=628;FS=4.853;HRun=0;HaplotypeScore=46.5230;InbreedingCoeff=0.1819;MQ=24.63;MQ0=178;MQRankSum=-0.117;QD=1.05;ReadPosRankSum=2.395;VQSLOD=0.9558;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:17,2:15:16.06:0,16,216	0/0:9,0:7:8.96:0,9,173	./.	./.	0/0:28,0:19:9.03:0,9,160	./.	./.	0/0:35,0:8:21.07:0,21,405	0/1:36,2:18:70.64:71,0,260	0/0:29,0:19:51.17:0,51,984	0/0:24,0:17:5.87:0,6,115	0/0:24,0:18:14.61:0,15,286	0/0:24,1:19:11.87:0,12,219	0/0:21,0:15:9.03:0,9,173	0/0:30,0:27:17.92:0,18,337	0/0:28,0:24:27.08:0,27,510	1/1:3,1:4:3.01:46,3,0	0/1:9,1:4:36.90:37,0,58	0/0:21,0:11:33.11:0,33,637	0/0:38,0:19:27.09:0,27,492	./.	0/0:26,0:18:12.04:0,12,221	0/0:21,0:14:3.01:0,3,45	./.	0/0:28,0:15:15.05:0,15,286	0/0:21,1:14:42.14:0,42,810	0/0:26,0:22:29.91:0,30,525	0/0:11,0:6:9.03:0,9,171
chr10	29368976	.	G	GTA	242.74	PASS	AB=0.672;AC=1;AF=0.020;AN=50;BaseQRankSum=-2.050;DP=623;FS=3.881;HRun=0;HaplotypeScore=53.6369;InbreedingCoeff=-0.0433;MQ=30.28;MQ0=165;MQRankSum=-0.647;QD=6.22;ReadPosRankSum=-1.258;VQSLOD=2.5426;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:14:24.08:0,24,365	0/0:9,0:7:12.04:0,12,183	./.	./.	0/0:32,0:23:24.08:0,24,367	0/0:22,0:17:21.07:0,21,321	./.	0/0:33,0:8:18.06:0,18,273	0/1:20,19:18:99:316,0,153	0/0:28,0:17:51.13:0,51,734	0/0:24,0:16:15.02:0,15,229	0/0:29,0:22:20.64:0,21,321	0/0:21,0:15:13.25:0,13,226	0/0:21,0:16:18.04:0,18,244	0/0:33,0:28:33.09:0,33,505	0/0:28,0:24:39.12:0,39,575	0/0:7,0:7:9.03:0,9,136	0/0:8,0:3:9.03:0,9,138	0/0:25,0:11:30.10:0,30,459	0/0:38,0:25:45.15:0,45,688	0/0:12,0:8:6.02:0,6,92	0/0:22,0:20:24.08:0,24,367	0/0:19,0:12:8.87:0,9,109	0/0:21,0:13:3.01:0,3,46	0/0:30,0:20:24.08:0,24,367	0/0:19,0:13:33.11:0,33,505	0/0:27,0:25:30.83:0,31,501	0/0:17,0:12:23.92:0,24,367
chr10	29369007	.	GGT	G	232.95	PASS	AB=0.814;AC=4;AF=0.080;AN=50;BaseQRankSum=4.727;DP=649;FS=12.138;HRun=0;HaplotypeScore=65.6696;InbreedingCoeff=0.2558;MQ=35.62;MQ0=133;MQRankSum=-0.078;QD=4.09;ReadPosRankSum=1.495;VQSLOD=0.4272;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:8,9:13:82.55:274,0,83	0/0:13,0:10:20.88:0,21,384	./.	./.	0/0:32,0:26:42.14:0,42,769	0/0:26,0:22:36.12:0,36,660	./.	0/0:29,0:7:21.07:0,21,384	0/1:36,1:21:16.30:16,0,335	0/0:26,0:17:51.17:0,51,914	0/0:27,0:19:30.10:0,30,549	0/0:35,0:31:32.67:0,33,604	0/0:24,0:21:20.46:0,20,384	0/0:24,0:19:24.08:0,24,422	0/0:31,0:30:32.86:0,33,604	0/0:28,0:25:36.12:0,36,659	0/0:7,0:7:9.03:0,9,164	1/1:2,1:1:3.01:43,3,0	0/0:23,0:11:30.10:0,30,526	0/0:36,0:29:57.20:0,57,1043	0/0:15,0:13:8.42:0,8,164	0/0:26,0:24:45.15:0,45,822	0/0:18,0:13:11.87:0,12,219	0/0:20,0:17:5.98:0,6,75	0/0:33,0:28:42.14:0,42,762	0/0:25,0:22:63.22:0,63,1140	0/0:31,0:30:44.98:0,45,791	0/0:16,0:12:18.06:0,18,330
chr10	29370446	.	CGCTCATTTTCCCACAGCTCTGAG	C	2650.49	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=6.802;DP=671;FS=0.000;HRun=0;HaplotypeScore=380.8702;InbreedingCoeff=0.9679;MQ=78.83;MQ0=0;MQRankSum=-6.714;QD=48.19;ReadPosRankSum=1.268;VQSLOD=1.5218;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:13,13:26:19.66:1245,20,0	0/0:8,0:8:15.05:0,15,1323	0/0:20,0:20:36.12:0,36,1700	0/0:22,0:22:30.06:0,30,1924	0/0:39,0:39:93.32:0,93,7911	0/0:17,0:17:36.11:0,36,3091	0/0:24,0:24:57.20:0,57,4199	0/0:34,0:34:45.15:0,45,2335	0/0:18,0:18:45.15:0,45,3814	0/0:28,0:28:54.19:0,54,5055	0/0:19,0:19:51.16:0,51,4358	0/0:30,0:30:75.26:0,75,7307	0/0:24,0:24:51.18:0,51,4996	0/0:23,0:23:51.18:0,51,5296	0/0:20,0:20:54.19:0,54,4979	0/0:20,0:20:54.17:0,54,4969	1/1:10,7:17:18.06:1080,18,0	1/1:9,3:12:9.03:461,9,0	0/0:23,0:23:36.09:0,36,2186	0/0:24,0:24:54.19:0,54,5091	0/0:46,0:46:99:0,102,8792	0/0:21,0:21:45.14:0,45,4081	0/0:18,0:18:48.16:0,48,3972	0/0:33,0:33:81.28:0,81,7701	0/0:24,0:24:60.21:0,60,5457	0/0:22,0:22:42.14:0,42,4037	0/0:37,0:37:96.33:0,96,8463	0/0:22,0:22:63.22:0,63,5451
chr10	29370859	.	GA	G	18715.03	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-7.035;DP=679;FS=7.513;HRun=1;HaplotypeScore=76.1858;InbreedingCoeff=0.9998;MQ=92.78;MQ0=1;MQRankSum=-6.677;QD=37.13;ReadPosRankSum=4.898;VQSLOD=5.1612;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,129,1957	1/1:0,13:13:39.13:541,39,0	0/0:24,0:24:72.24:0,72,1139	0/0:35,0:35:99:0,105,1471	1/1:0,20:20:57.19:794,57,0	1/1:0,32:32:75.25:1046,75,0	1/1:0,23:23:66.22:922,66,0	1/1:0,35:35:99:1446,105,0	0/0:23,0:23:66.18:0,66,1004	1/1:0,21:21:63.18:844,63,0	1/1:0,13:13:36.12:503,36,0	1/1:0,24:24:66.22:922,66,0	1/1:0,28:28:66.22:922,66,0	1/1:0,31:31:87.29:1215,87,0	1/1:0,30:30:72.24:1006,72,0	1/1:0,32:32:90.30:1258,90,0	0/0:32,0:32:93.27:0,93,1243	0/0:18,0:18:51.17:0,51,711	1/1:0,11:11:33.08:425,33,0	1/1:0,13:13:36.08:480,36,0	1/1:0,43:42:99:1509,108,0	1/1:0,18:18:51.17:712,51,0	1/1:0,21:21:51.17:710,51,0	1/1:0,25:25:60.20:839,60,0	1/1:0,17:17:48.16:670,48,0	1/1:0,23:23:66.20:903,66,0	1/1:0,16:16:33.11:461,33,0	1/1:0,15:15:42.14:587,42,0
chr10	29372558	.	TATTC	T	1543.67	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=7.959;DP=626;FS=3.215;HRun=0;HaplotypeScore=101.1486;InbreedingCoeff=0.9305;MQ=65.49;MQ0=1;MQRankSum=1.265;QD=26.61;ReadPosRankSum=1.929;VQSLOD=3.2731;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,16:22:45.15:722,45,0	0/0:10,0:10:18.06:0,18,433	0/0:15,0:12:12.04:0,12,262	0/0:13,0:11:6.02:0,6,145	0/0:25,0:25:51.16:0,51,1144	0/0:19,0:19:30.06:0,30,634	0/0:22,0:22:42.14:0,42,1010	0/0:38,0:38:51.17:0,51,1124	0/0:7,0:28:54.18:0,54,940	0/0:37,0:37:75.25:0,75,1741	0/0:23,0:23:51.18:0,51,1214	0/0:20,0:20:42.14:0,42,1005	0/0:31,0:31:60.21:0,60,1400	0/0:24,0:24:48.16:0,48,1125	0/0:20,0:20:48.16:0,48,1149	0/0:19,0:19:48.15:0,48,1085	1/1:4,13:17:36.12:578,36,0	1/1:5,14:19:24.08:385,24,0	0/0:20,0:20:33.10:0,33,721	0/0:23,0:23:54.66:0,55,1287	0/0:36,0:36:66.20:0,66,1508	0/0:21,0:21:45.15:0,45,1083	0/0:24,0:24:54.17:0,54,1228	0/0:13,0:13:27.09:0,27,650	0/0:26,0:26:57.18:0,57,1302	0/0:24,0:24:60.21:0,60,1434	0/0:32,0:32:72.25:0,72,1706	0/0:5,0:5:9.03:0,9,217
chr10	29372764	.	AGAGAGAGAGAGAGAGAGAGAGTGT	A	894.25	PASS	AB=0.939;AC=9;AF=0.161;AN=56;BaseQRankSum=0.153;DP=638;FS=23.956;HRun=0;HaplotypeScore=291.6867;InbreedingCoeff=0.0112;MQ=52.30;MQ0=24;MQRankSum=2.847;QD=4.83;ReadPosRankSum=-8.229;VQSLOD=-0.0294;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:12.04:0,12,455	0/0:12,0:12:17.86:0,18,1113	0/0:26,0:7:9.03:0,9,186	0/0:49,0:6:17.01:0,17,377	0/1:25,0:24:7.25:7,0,2027	0/0:19,0:19:11.59:0,12,2665	0/0:21,0:19:48.16:0,48,2765	0/1:35,0:33:99:310,0,2833	0/0:21,0:21:53.74:0,54,3734	0/0:21,0:21:7.28:0,7,2507	0/0:19,0:19:27.09:0,27,1416	0/0:29,0:29:45.13:0,45,2967	0/0:16,0:15:39.13:0,39,2463	0/0:27,0:26:39.13:0,39,2378	0/0:14,0:14:18.06:0,18,1258	0/0:24,0:24:20.55:0,21,4032	1/1:5,10:13:6.02:398,6,0	0/1:4,12:16:99:193,0,183	0/1:21,0:20:12.96:13,0,2680	0/1:32,0:32:35.44:35,0,3917	0/1:23,0:23:51.29:51,0,3245	0/0:17,0:16:7.37:0,7,823	0/0:23,0:23:22.62:0,23,1862	0/0:21,0:21:30.57:0,31,1948	0/0:36,0:35:66.21:0,66,4241	0/1:18,0:18:23.60:24,0,2608	0/0:24,0:24:54.19:0,54,3904	0/0:10,0:10:27.72:0,28,1205
chr10	29372780	.	AGAGAGTGT	A	6186.20	PASS	AB=0.990;AC=23;AF=0.411;AN=56;BaseQRankSum=2.566;DP=647;FS=36.259;HRun=0;HaplotypeScore=156.4448;InbreedingCoeff=-0.3038;MQ=69.51;MQ0=19;MQRankSum=3.168;QD=14.49;ReadPosRankSum=6.597;VQSLOD=2.5633;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:9.03:0,9,152	0/1:11,0:11:29.42:29,0,65	0/0:44,0:20:30.84:0,31,673	0/0:51,0:17:36.07:0,36,665	0/1:28,0:28:55.63:56,0,204	0/1:21,0:21:99:239,0,261	0/1:18,0:16:99:353,0,250	0/1:44,0:44:99:1230,0,177	0/0:18,0:18:27.90:0,28,770	1/1:0,15:15:45.14:774,45,0	1/1:6,9:15:9.46:160,9,0	0/1:28,1:29:99:128,0,202	0/1:21,1:22:99:600,0,175	0/0:21,0:20:11.88:0,12,130	0/1:15,0:15:43.02:43,0,80	0/1:20,0:20:99:209,0,442	1/1:11,0:10:6.02:133,6,0	0/1:15,0:15:27.08:106,0,27	0/1:18,0:18:99:267,0,308	0/1:31,2:33:99:891,0,262	0/1:26,0:26:99:435,0,307	0/0:15,0:14:5.09:0,5,89	0/0:20,0:20:16.79:0,17,262	0/1:19,0:19:18.55:19,0,181	0/1:34,1:34:15.98:16,0,491	0/1:19,0:19:99:253,0,259	0/0:28,0:28:41.15:0,41,454	0/1:13,0:13:99:244,0,124
chr10	29372782	.	AGAGTGT	A	6897.14	PASS	AB=0.944;AC=26;AF=0.464;AN=56;BaseQRankSum=2.857;DP=644;FS=50.611;HRun=0;HaplotypeScore=138.4281;InbreedingCoeff=-0.3309;MQ=70.46;MQ0=18;MQRankSum=0.223;QD=14.67;ReadPosRankSum=8.674;VQSLOD=2.0966;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:24:9.02:0,9,128	0/1:1,9:10:37.65:68,0,38	0/0:45,0:22:36.84:0,37,799	0/0:52,0:18:38.82:0,39,679	0/1:28,0:28:58.59:59,0,59	0/1:21,0:21:77:295,0,77	0/1:18,0:16:85.52:376,0,86	1/1:46,0:46:13.17:1295,13,0	0/0:19,0:19:21.74:0,22,501	1/1:15,0:15:42.14:705,42,0	1/1:14,0:14:6.46:77,6,0	0/1:25,2:27:47.81:213,0,48	0/1:21,1:22:42.21:700,0,42	0/1:20,0:19:14.34:21,0,14	0/1:4,11:15:9.11:156,0,9	0/1:19,0:19:99:270,0,155	1/1:11,0:10:6.02:105,6,0	0/1:15,0:15:3.72:93,0,4	0/1:17,0:17:96.93:299,0,97	0/1:31,0:31:42.64:905,0,43	0/1:27,0:27:75.31:600,0,75	0/0:7,7:13:2.57:0,3,23	0/0:20,0:20:7.93:0,8,78	0/1:20,0:20:41.12:41,0,50	0/1:34,0:33:25.47:25,0,132	0/1:19,0:19:35.83:301,0,36	0/1:28,0:28:45.18:45,0,91	0/1:13,0:13:44.69:249,0,45
chr10	29372784	.	AGTGT	A	8747.25	PASS	AB=0.813;AC=45;AF=0.804;AN=56;BaseQRankSum=-2.828;DP=617;FS=0.629;HRun=0;HaplotypeScore=117.9290;InbreedingCoeff=0.6611;MQ=74.57;MQ0=18;MQRankSum=-3.451;QD=18.61;ReadPosRankSum=4.126;VQSLOD=4.6967;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:25:12.47:0,12,149	1/1:10,0:10:2.37:41,2,0	0/0:48,0:25:33.80:0,34,858	0/0:54,0:20:41.45:0,41,728	1/1:11,16:27:5.30:73,5,0	1/1:18,0:18:26.77:422,27,0	1/1:16,0:15:33.11:521,33,0	1/1:14,31:45:89.99:1407,90,0	0/0:19,0:20:10.73:0,11,217	1/1:15,0:15:42.14:690,42,0	1/1:14,0:14:5.23:47,5,0	1/1:6,18:24:18.06:291,18,0	1/1:20,1:21:48.09:762,48,0	1/1:4,15:18:3.01:56,3,0	1/1:12,2:14:12.04:194,12,0	1/1:13,3:18:36.05:514,36,0	1/1:11,0:10:6.02:77,6,0	0/1:14,0:15:3.25:79,0,3	1/1:7,10:17:26.92:389,27,0	1/1:28,2:30:69.22:1090,69,0	1/1:24,0:24:48.04:794,48,0	0/1:10,0:10:0.06:0,0,0	0/1:5,12:17:0.33:0,0,1	1/1:7,11:18:5.96:75,6,0	1/1:10,21:30:11.40:176,11,0	1/1:7,9:16:24.01:402,24,0	1/1:3,20:23:14.97:279,15,0	1/1:15,0:15:23.97:368,24,0
chr10	29373293	.	GC	G	11183.96	PASS	AB=0.938;AC=53;AF=0.946;AN=56;BaseQRankSum=-4.744;DP=648;FS=2.678;HRun=9;HaplotypeScore=86.6927;InbreedingCoeff=0.7343;MQ=77.85;MQ0=0;MQRankSum=-6.833;QD=17.61;ReadPosRankSum=6.658;VQSLOD=4.9309;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,0:48:73.33:216,73,0	1/1:1,14:14:39.01:357,39,0	0/1:28,2:30:5.99:6,0,426	0/0:13,0:13:29.87:0,30,317	1/1:2,30:32:84.04:768,84,0	1/1:2,16:18:42.02:384,42,0	1/1:4,14:18:36.02:330,36,0	1/1:3,25:29:71.03:628,71,0	1/1:0,0:16:32.59:96,33,0	1/1:4,22:26:68.92:615,69,0	1/1:2,16:18:39.01:357,39,0	1/1:1,14:15:42.02:384,42,0	1/1:1,16:17:39.02:357,39,0	1/1:2,17:19:45.02:412,45,0	1/1:2,19:21:51.03:467,51,0	1/1:2,18:20:45.02:412,45,0	1/1:5,0:52:89.63:264,90,0	1/1:5,0:22:34.62:102,35,0	1/1:5,15:20:48.02:439,48,0	1/1:1,26:26:69.04:631,69,0	1/1:2,14:17:44.06:390,44,0	1/1:4,19:23:54.03:494,54,0	1/1:1,26:27:72.03:659,72,0	1/1:0,15:15:42.02:384,42,0	1/1:4,21:25:54.02:494,54,0	1/1:3,18:22:56.05:496,56,0	1/1:2,23:24:69.04:631,69,0	1/1:1,17:18:45.02:412,45,0
chr10	29373470	.	GTA	G	574.27	PASS	AB=0.854;AC=10;AF=0.179;AN=56;BaseQRankSum=5.908;DP=541;FS=61.871;HRun=0;HaplotypeScore=75.3369;InbreedingCoeff=-0.2168;MQ=42.55;MQ0=21;MQRankSum=-6.267;QD=2.79;ReadPosRankSum=-1.089;VQSLOD=-0.7420;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:7,4:8:99:116,0,210	0/1:9,5:13:21.77:22,0,381	0/0:31,0:11:33.11:0,33,621	0/0:23,0:6:18.06:0,18,334	0/1:26,11:31:22.37:22,0,1146	0/0:20,7:20:5.64:0,6,846	0/1:15,2:17:0.70:1,0,764	0/0:46,0:41:99:0,123,2317	0/0:13,0:12:30.10:0,30,578	0/1:21,7:26:71.25:71,0,1018	0/0:17,3:16:39.13:0,39,752	0/0:14,0:14:39.13:0,39,750	0/0:16,0:16:48.16:0,48,919	0/0:13,0:12:36.12:0,36,685	0/0:17,0:16:45.15:0,45,867	0/0:10,0:10:27.09:0,27,520	0/1:13,0:12:96.26:96,0,447	0/0:2,0:2:6.02:0,6,116	0/0:9,0:7:21.07:0,21,392	0/0:30,6:33:35.42:0,35,1447	0/0:12,0:11:24.08:0,24,463	0/1:24,3:23:99:155,0,972	0/1:19,5:19:91.90:92,0,594	0/0:12,0:8:24.08:0,24,463	0/1:24,4:24:67.88:68,0,1032	0/0:16,0:16:45.14:0,45,823	0/0:18,0:17:45.15:0,45,865	0/1:7,0:6:70.18:70,0,214
chr10	29373521	.	GGT	G	1160.83	PASS	AB=0.972;AC=26;AF=0.619;AN=42;BaseQRankSum=2.662;DP=216;FS=21.783;HRun=0;HaplotypeScore=29.1040;InbreedingCoeff=-0.0418;MQ=31.69;MQ0=70;MQRankSum=-0.862;QD=7.44;ReadPosRankSum=2.739;VQSLOD=1.5057;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,6:6:15.05:214,15,0	./.	0/0:10,0:2:6.02:0,6,81	0/0:9,0:3:3.19:0,3,81	1/1:16,0:8:14.83:124,15,0	0/1:10,0:7:36.93:69,0,37	1/1:6,0:4:5.81:32,6,0	0/0:7,0:3:3.01:0,3,34	./.	1/1:12,0:5:11.89:96,12,0	1/1:7,0:5:8.89:71,9,0	./.	0/1:6,0:5:38.28:38,0,77	0/1:6,0:6:20.24:66,0,20	0/1:9,0:8:33.97:103,0,34	0/1:9,0:7:39.89:56,0,40	1/1:2,0:1:2.90:16,3,0	./.	./.	1/1:9,0:7:14.78:106,15,0	./.	0/1:16,0:6:40.21:68,0,40	1/1:11,1:6:5.91:46,6,0	0/0:9,0:1:3.01:0,3,41	0/1:11,0:7:40.07:67,0,40	0/1:5,2:5:29.96:50,0,30	1/1:8,0:5:8.93:77,9,0	./.
chr10	29373523	.	TGTG	T	2611.21	PASS	AB=0.709;AC=24;AF=0.571;AN=42;BaseQRankSum=-1.309;DP=210;FS=16.720;HRun=0;HaplotypeScore=25.8763;InbreedingCoeff=-0.0113;MQ=30.23;MQ0=79;MQRankSum=-1.018;QD=18.39;ReadPosRankSum=0.738;VQSLOD=1.5184;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:6:6.57:0,7,28	./.	0/0:12,0:2:6.02:0,6,137	0/0:9,0:3:3.99:0,4,95	1/1:8,7:7:15.05:263,15,0	0/1:3,6:6:51.46:231,0,51	1/1:2,3:3:6.02:106,6,0	0/0:4,0:1:3.01:0,3,45	./.	1/1:10,3:5:12.04:210,12,0	1/1:6,1:5:12.03:181,12,0	./.	0/1:4,2:5:99:131,0,109	0/1:2,4:6:30.44:196,0,30	0/1:2,6:7:48.42:291,0,48	0/1:6,4:8:54.44:196,0,54	1/1:1,1:1:3.01:53,3,0	./.	./.	1/1:6,3:6:15.05:242,15,0	./.	0/1:13,3:5:55.91:182,0,56	1/1:9,3:5:6.02:105,6,0	0/0:9,1:1:3.01:0,3,57	0/1:7,4:7:55.66:194,0,56	0/1:5,1:4:45.98:46,0,50	1/1:5,2:4:9.03:127,9,0	./.
chr10	29373992	.	GTA	G	201.09	PASS	AB=0.607;AC=1;AF=0.018;AN=56;BaseQRankSum=4.612;DP=565;FS=1.469;HRun=0;HaplotypeScore=53.8578;InbreedingCoeff=-0.0211;MQ=40.97;MQ0=108;MQRankSum=-0.284;QD=11.83;ReadPosRankSum=-0.769;VQSLOD=2.8250;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:6,11:14:99:276,0,191	0/0:14,0:13:36.12:0,36,671	0/0:20,0:5:8.26:0,8,128	0/0:25,0:7:21.07:0,21,346	0/0:20,0:16:48.16:0,48,897	0/0:18,0:16:33.11:0,33,617	0/0:19,0:15:27.09:0,27,505	0/0:38,0:24:66.23:0,66,1228	0/0:21,0:18:51.17:0,51,954	0/0:18,0:14:39.13:0,39,731	0/0:17,0:16:39.13:0,39,729	0/0:19,0:15:36.12:0,36,673	0/0:27,0:25:67.47:0,67,1236	0/0:18,0:13:33.11:0,33,610	0/0:31,0:25:57.20:0,57,1065	0/0:16,0:11:30.10:0,30,561	0/0:21,0:18:39.13:0,39,730	0/0:23,0:22:54.12:0,54,943	0/0:11,0:8:24.08:0,24,449	0/0:20,0:18:45.15:0,45,841	0/0:22,0:16:42.07:0,42,784	0/0:15,0:14:36.12:0,36,672	0/0:25,0:21:60.21:0,60,1122	0/0:11,0:8:24.08:0,24,449	0/0:18,0:17:51.17:0,51,945	0/0:24,0:18:54.18:0,54,993	0/0:25,0:19:51.17:0,51,954	0/0:11,0:7:21.07:0,21,392
chr10	29375698	.	CCA	C	1264.74	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=9.433;DP=894;FS=13.009;HRun=0;HaplotypeScore=104.5396;InbreedingCoeff=0.9989;MQ=93.85;MQ0=0;MQRankSum=-4.421;QD=32.43;ReadPosRankSum=1.793;VQSLOD=5.4295;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,37:39:99:1360,99,0	0/0:11,0:11:27.09:0,27,471	0/0:36,0:36:93.32:0,93,1628	0/0:44,0:44:99:0,115,1914	0/0:27,0:27:75.24:0,75,1300	0/0:25,0:25:66.23:0,66,1161	0/0:27,0:27:72.25:0,72,1278	0/0:31,0:31:90.31:0,90,1561	0/0:36,0:36:99:0,102,1810	0/0:32,0:32:96.33:0,96,1683	0/0:31,0:31:90.29:0,90,1559	0/0:33,0:33:99:0,99,1739	0/0:33,0:33:87.28:0,87,1515	0/0:37,0:37:99:0,105,1822	0/0:51,0:51:99:0,150,2626	0/0:43,0:43:99:0,126,2199	0/0:27,0:27:75.26:0,75,1307	0/0:25,0:25:72.12:0,72,1236	0/0:28,0:28:75.24:0,75,1288	0/0:29,0:29:78.27:0,78,1370	0/0:51,0:51:99:0,132,2312	0/0:34,0:34:99:0,99,1712	0/0:37,0:37:93.32:0,93,1633	0/0:32,0:32:93.32:0,93,1642	0/0:28,0:28:81.28:0,81,1430	0/0:23,0:23:69.24:0,69,1211	0/0:31,0:31:90.31:0,90,1583	0/0:13,0:13:39.13:0,39,692
chr10	29376524	.	GTTTT	G	1201.24	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=3.173;DP=631;FS=2.211;HRun=15;HaplotypeScore=113.9921;InbreedingCoeff=0.9794;MQ=72.50;MQ0=4;MQRankSum=0.497;QD=19.37;ReadPosRankSum=5.284;VQSLOD=2.2826;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,24:36:30.99:652,31,0	0/0:12,0:12:24.54:0,25,482	0/0:32,0:22:32.70:0,33,493	0/0:23,0:14:21.69:0,22,189	0/0:18,0:20:41.96:0,42,705	0/0:17,0:20:51.16:0,51,933	0/0:12,0:12:27.02:0,27,408	0/0:32,0:34:82.84:0,83,1185	1/1:3,23:25:51.06:671,51,0	0/0:19,0:20:53.14:0,53,891	0/0:15,0:15:36.12:0,36,671	0/0:17,0:18:45.13:0,45,893	0/0:22,0:22:63.17:0,63,1168	0/0:14,0:18:33.09:0,33,648	0/0:26,0:27:69.15:0,69,1208	0/0:23,1:26:28.34:0,28,1306	0/0:28,0:29:75.22:0,75,1435	0/0:29,0:30:69.14:0,69,1270	0/0:33,0:34:75.09:0,75,1231	0/0:27,0:29:72.09:0,72,1120	0/0:13,0:13:30.06:0,30,400	0/0:14,0:15:39.12:0,39,786	0/0:16,0:15:30.09:0,30,551	0/0:28,0:30:63.20:0,63,1297	0/0:15,0:18:50.18:0,50,899	0/0:19,0:22:54.12:0,54,988	0/0:8,0:22:50.52:0,51,556	0/0:5,0:7:11.95:0,12,192
chr10	29377464	.	G	GT	1714.73	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-10.680;DP=657;FS=2.222;HRun=9;HaplotypeScore=85.8198;InbreedingCoeff=0.9742;MQ=74.96;MQ0=1;MQRankSum=-1.653;QD=21.98;ReadPosRankSum=2.022;VQSLOD=4.3877;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,120,1038	0/0:14,0:15:38.01:0,38,315	0/0:12,0:12:9.98:0,10,189	0/0:20,0:18:34.32:0,34,307	0/0:28,1:29:49.81:0,50,645	0/0:22,0:22:59.97:0,60,518	0/0:22,0:22:56.95:0,57,488	0/0:34,1:36:49.77:0,50,639	1/1:0,15:15:39.11:431,39,0	0/0:19,0:20:53.01:0,53,444	0/0:21,0:21:59.99:0,60,520	0/0:25,0:25:53.31:0,53,599	0/0:27,0:27:71.72:0,72,600	0/0:19,1:21:19.84:0,20,390	0/0:17,1:18:14.80:0,15,357	0/0:21,0:21:59.96:0,60,515	1/1:6,25:31:63.17:697,63,0	1/1:4,27:32:26.04:729,26,0	0/0:16,0:16:41.97:0,42,361	0/0:34,0:35:99:0,101,848	0/0:23,0:23:56.97:0,57,495	0/0:21,0:22:55.95:0,56,462	0/0:17,0:17:41.83:0,42,343	0/0:31,0:31:83.96:0,84,726	0/0:26,0:26:68.97:0,69,595	0/0:22,0:22:62.96:0,63,542	0/0:22,0:20:59.99:0,60,521	0/0:9,0:9:23.99:0,24,208
chr10	29378969	.	T	TTTG	2293.32	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-8.090;DP=768;FS=5.763;HRun=0;HaplotypeScore=104.5843;InbreedingCoeff=0.9984;MQ=73.88;MQ0=1;MQRankSum=-2.482;QD=40.95;ReadPosRankSum=3.176;VQSLOD=5.0882;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,46:56:80.42:2388,80,0	0/0:14,0:14:36.10:0,36,496	0/0:29,0:25:27.76:0,28,388	0/0:33,0:32:54.05:0,54,734	0/0:24,0:24:57.17:0,57,781	0/0:29,0:29:69.19:0,69,934	0/0:19,0:19:42.14:0,42,602	0/0:31,0:31:36.12:0,36,516	0/0:23,0:23:51.12:0,51,651	0/0:28,0:28:69.23:0,69,988	0/0:28,0:28:75.24:0,75,1054	0/0:24,0:25:69.20:0,69,967	0/0:28,0:28:72.67:0,73,965	0/0:29,0:29:66.21:0,66,929	0/0:31,0:30:69.21:0,69,954	0/0:24,0:24:66.21:0,66,930	0/0:19,0:19:45.15:0,45,645	0/0:21,0:22:51.08:0,51,668	0/0:17,0:17:33.10:0,33,442	0/0:23,0:23:51.15:0,51,693	0/0:46,0:46:90.27:0,90,1254	0/0:27,0:27:63.19:0,63,868	0/0:25,0:26:63.18:0,63,873	0/0:30,0:31:84.18:0,84,1140	0/0:26,0:26:69.20:0,69,935	0/0:26,0:26:60.18:0,60,839	0/0:35,0:34:78.25:0,78,1086	0/0:18,0:18:36.06:0,36,441
chr10	29380872	.	TCC	T	4373.99	PASS	AB=0.750;AC=51;AF=0.911;AN=56;BaseQRankSum=-4.785;DP=446;FS=6.375;HRun=13;HaplotypeScore=75.4301;InbreedingCoeff=0.6242;MQ=76.00;MQ0=1;MQRankSum=-2.885;QD=10.64;ReadPosRankSum=3.823;VQSLOD=3.4067;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,23:31:53.81:523,54,0	1/1:1,3:5:5.87:44,6,0	0/0:15,0:15:19.27:0,19,165	0/0:18,0:18:25.24:0,25,268	1/1:6,6:15:17.43:140,17,0	1/1:6,8:16:20.45:169,20,0	1/1:4,11:20:37.55:290,38,0	1/1:13,4:20:20.17:152,20,0	1/1:3,0:16:35.67:154,36,0	1/1:4,5:10:14.71:128,15,0	1/1:6,3:11:20.47:162,20,0	1/1:9,4:14:12.10:100,12,0	1/1:3,5:9:9.20:71,9,0	1/1:5,7:12:14.93:145,15,0	1/1:8,13:20:29.97:291,30,0	1/1:3,7:11:14.98:145,15,0	1/1:3,0:24:52.13:225,52,0	1/1:3,0:24:46.63:202,47,0	0/1:8,4:12:8.15:99,0,8	1/1:6,5:13:17.20:139,17,0	1/1:11,10:22:11.89:116,12,0	1/1:16,1:18:8.46:108,8,0	1/1:5,5:11:14.72:128,15,0	1/1:8,13:24:37.75:309,38,0	1/1:1,4:5:9:87,9,0	1/1:13,5:19:11.92:116,12,0	1/1:8,12:22:29.69:273,30,0	1/1:3,3:6:5.97:58,6,0
chr10	29382771	.	GCACA	G	253.29	PASS	AB=1.000;AC=5;AF=0.093;AN=54;BaseQRankSum=3.209;DP=395;FS=2.727;HRun=0;HaplotypeScore=81.8361;InbreedingCoeff=0.5620;MQ=54.70;MQ0=3;MQRankSum=1.561;QD=5.17;ReadPosRankSum=0.791;VQSLOD=1.7903;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:7,17:25:18.06:303,18,0	0/0:5,0:4:8.90:0,9,172	./.	0/0:6,0:2:2.97:0,3,20	0/0:15,0:17:34.84:0,35,472	0/0:13,0:12:23.54:0,24,320	0/0:17,0:18:19.40:0,19,209	0/0:23,0:23:32.84:0,33,213	1/1:2,0:10:5.99:51,6,0	0/0:20,0:20:45.91:0,46,557	0/0:12,0:12:11.61:0,12,187	0/0:8,0:8:11.98:0,12,92	0/0:7,0:7:15.56:0,16,153	0/0:6,0:6:6.60:0,7,53	0/0:9,0:9:15.97:0,16,91	0/0:8,0:8:15.41:0,15,239	0/0:29,0:29:66.21:0,66,1149	0/0:36,0:35:83.92:0,84,1614	0/0:15,0:15:30.34:0,30,451	0/0:10,0:10:13.10:0,13,182	0/0:18,0:17:35.70:0,36,517	0/0:7,0:7:9.03:0,9,189	0/0:10,0:10:11.76:0,12,125	0/0:21,0:21:33.33:0,33,447	0/1:14,0:14:15.11:15,0,302	0/0:16,0:15:37.71:0,38,537	0/0:14,0:14:30.32:0,30,274	0/0:14,0:14:14.25:0,14,328
chr10	29383989	.	TG	T	2487.24	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.978;DP=715;FS=2.172;HRun=2;HaplotypeScore=73.1758;InbreedingCoeff=0.9999;MQ=87.61;MQ0=1;MQRankSum=-3.411;QD=35.03;ReadPosRankSum=1.900;VQSLOD=4.1959;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,114,1685	0/0:14,0:14:42.14:0,42,629	0/0:26,0:26:72.24:0,72,1066	0/0:30,0:30:80.48:0,80,1117	0/0:22,0:22:66.21:0,66,940	0/0:19,0:19:57.18:0,57,833	0/0:36,0:36:99:0,102,1488	0/0:28,0:28:78.26:0,78,1151	0/0:23,0:23:69.23:0,69,1034	0/0:20,0:20:57.19:0,57,853	0/0:13,0:13:39.13:0,39,583	0/0:24,0:24:72.23:0,72,1055	0/0:24,0:24:72.24:0,72,1077	0/0:29,0:29:87.29:0,87,1301	0/0:25,0:25:75.25:0,75,1121	0/0:29,0:29:87.29:0,87,1304	1/1:0,40:40:99:1440,111,0	1/1:1,30:31:90.29:1169,90,0	0/0:28,0:28:81.27:0,81,1210	0/0:20,0:20:57.19:0,57,854	0/0:43,0:42:99:0,123,1823	0/0:21,0:21:57.18:0,57,834	0/0:18,0:18:54.18:0,54,809	0/0:26,0:26:69.22:0,69,1014	0/0:21,0:21:60.20:0,60,889	0/0:30,0:30:90.30:0,90,1349	0/0:20,0:20:60.20:0,60,898	0/0:13,0:13:39.13:0,39,568
chr10	29384359	.	CGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	C	9026.06	PASS	AB=0.826;AC=38;AF=0.679;AN=56;BaseQRankSum=3.584;DP=587;FS=14.330;HRun=0;HaplotypeScore=337.5851;InbreedingCoeff=0.4493;MQ=66.50;MQ0=30;MQRankSum=-2.908;QD=22.85;ReadPosRankSum=1.327;VQSLOD=1.8274;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:24:27.07:0,27,1669	1/1:7,2:9:3.01:230,3,0	0/0:37,0:21:9.03:0,9,230	0/0:37,0:21:9.69:0,10,152	1/1:13,1:14:3.14:256,3,0	1/1:10,8:16:12.04:883,12,0	1/1:19,0:18:23.83:309,24,0	0/1:19,0:19:3.62:76,0,4	0/0:15,0:19:15.05:0,15,980	1/1:15,0:15:6.01:58,6,0	1/1:11,0:11:8.90:60,9,0	1/1:14,10:25:18.06:1354,18,0	1/1:18,6:25:9.86:664,10,0	1/1:9,7:16:3.01:229,3,0	1/1:9,13:22:8.42:688,8,0	1/1:14,9:22:9.03:626,9,0	0/0:23,0:30:36.11:0,36,1066	0/0:17,0:27:30.66:0,31,788	0/0:12,0:12:4.04:0,4,16	1/1:20,2:22:3.01:230,3,0	0/1:35,0:32:9:253,0,9	1/1:6,4:8:3.01:229,3,0	1/1:6,10:16:3.01:214,3,0	1/1:24,0:24:31.99:609,32,0	1/1:12,10:23:6.02:439,6,0	0/1:9,6:16:99:481,0,119	1/1:9,8:17:12.04:918,12,0	0/1:5,9:13:99:220,0,173
chr10	29385099	.	CAG	C	1096.65	PASS	AB=0.994;AC=31;AF=0.596;AN=52;BaseQRankSum=-1.780;DP=1021;FS=13.232;HRun=0;HaplotypeScore=223.0736;InbreedingCoeff=-0.4523;MQ=25.35;MQ0=151;MQRankSum=2.672;QD=1.13;ReadPosRankSum=-3.518;VQSLOD=0.9307;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:48,0:34:18.72:19,0,45	0/1:25,0:18:6.35:56,0,6	./.	./.	0/1:39,1:34:43.40:52,0,43	1/1:32,1:28:13.43:76,13,0	0/0:50,0:21:1.02:0,1,3	0/1:30,0:6:2.33:2,0,45	0/1:44,0:34:56.36:86,0,56	0/1:53,0:30:88.49:88,0,273	1/1:29,0:21:3:25,3,0	0/1:31,0:19:23.85:24,0,45	1/1:31,0:24:7.14:43,7,0	1/1:31,0:23:2.41:13,2,0	0/1:37,0:25:0:0,0,0	0/1:20,0:12:11.75:18,0,12	0/1:42,0:33:48.67:49,0,85	0/1:36,0:25:57.12:57,0,108	0/1:13,1:7:12.99:35,0,13	0/1:48,0:43:37.48:78,0,37	0/1:109,0:58:13.05:13,0,106	1/1:50,0:43:8.79:69,9,0	0/1:39,0:32:0.10:0,0,0	0/1:32,1:19:11.02:16,0,11	1/1:43,0:38:8.31:55,8,0	0/1:58,0:39:99:222,0,304	0/1:22,0:16:38.34:38,0,159	0/1:25,0:24:99:100,0,182
chr10	29385117	.	CAG	C	427.63	PASS	AB=0.988;AC=24;AF=0.480;AN=50;BaseQRankSum=-0.636;DP=879;FS=18.134;HRun=0;HaplotypeScore=192.6775;InbreedingCoeff=-0.2563;MQ=23.29;MQ0=136;MQRankSum=0.823;QD=0.69;ReadPosRankSum=-1.401;VQSLOD=1.4696;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:41,0:28:18.25:18,0,42	0/1:22,0:16:18.70:19,0,46	./.	./.	0/1:38,0:34:9.99:10,0,49	1/1:25,1:22:2.74:16,3,0	1/1:34,0:12:2.55:15,3,0	0/1:33,0:8:15.53:16,0,164	0/1:34,0:26:12.63:13,0,64	0/1:54,1:37:85.06:85,0,322	./.	0/0:26,0:13:7.54:0,8,70	1/1:25,1:19:2.93:27,3,0	1/1:27,0:18:2.06:7,2,0	0/1:28,0:19:0.08:0,0,0	0/0:18,0:11:3.01:0,3,44	0/1:33,1:26:36.87:37,0,95	0/1:29,0:19:77.97:89,0,78	0/1:14,1:7:26.46:38,0,26	0/1:36,0:32:27.88:28,0,46	0/0:98,0:49:6.02:0,6,115	0/1:42,0:39:0.07:1,0,0	0/0:41,0:34:2.03:0,2,4	0/0:28,0:14:2.77:0,3,53	1/1:36,1:32:1.38:16,1,0	0/1:42,1:28:86.63:87,0,225	0/0:19,0:13:15.41:0,15,124	0/1:22,1:21:41.12:41,0,162
chr10	29385131	.	CAG	C	895.74	PASS	AB=0.993;AC=25;AF=0.481;AN=52;BaseQRankSum=-1.146;DP=808;FS=8.259;HRun=0;HaplotypeScore=167.3980;InbreedingCoeff=-0.1557;MQ=22.85;MQ0=122;MQRankSum=-0.499;QD=1.70;ReadPosRankSum=1.061;VQSLOD=2.2361;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:22:0.55:0,1,14	0/1:21,0:16:8.94:18,0,9	1/1:4,0:1:2.04:6,2,0	./.	0/0:35,0:33:2.92:0,3,17	1/1:23,0:19:2.45:7,2,0	1/1:37,0:16:5.57:31,6,0	0/1:31,0:12:43.94:85,0,44	0/0:27,0:19:1.78:0,2,56	1/1:49,2:37:25.77:466,26,0	./.	0/1:25,0:14:10.80:15,0,11	0/1:29,0:23:11.22:11,0,33	0/0:26,0:20:2.89:0,3,17	0/1:29,1:22:0.15:0,0,0	0/0:18,0:12:2.47:0,2,10	0/1:32,0:24:11.71:12,0,40	0/1:27,0:17:26.77:60,0,27	0/1:11,0:5:9.64:25,0,10	0/1:27,0:23:11.42:11,0,12	0/0:84,0:41:5.67:0,6,48	0/1:39,0:37:0:0,0,0	1/1:33,1:27:1.36:3,1,0	0/0:27,1:14:2.76:0,3,29	1/1:30,1:27:3.86:20,4,0	0/1:39,0:26:28.51:181,0,29	0/1:17,0:11:23.33:34,0,23	0/1:17,1:16:45.43:45,0,54
chr10	29385133	.	GAC	G	1155.85	PASS	AB=0.920;AC=22;AF=0.423;AN=52;BaseQRankSum=-2.982;DP=770;FS=5.071;HRun=0;HaplotypeScore=160.0725;InbreedingCoeff=-0.0368;MQ=23.07;MQ0=113;MQRankSum=-0.879;QD=2.21;ReadPosRankSum=1.761;VQSLOD=2.5719;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:18:0.47:0,0,1	0/0:17,2:14:0:0,0,0	0/0:4,0:1:2.84:0,3,14	./.	1/1:31,3:33:2.22:7,2,0	1/1:18,2:18:1.53:5,2,0	1/1:31,3:15:2.14:33,2,0	0/1:28,4:14:34.23:209,0,34	0/0:21,6:19:2.99:0,3,49	0/1:40,11:37:35.62:573,0,36	./.	1/1:22,1:13:2.84:37,3,0	0/1:28,2:24:34.44:34,0,67	0/0:24,1:19:2.99:0,3,33	0/1:29,1:22:0:0,0,0	0/1:17,0:12:0:0,0,0	0/0:29,1:24:3.89:0,4,41	0/0:24,1:16:2.66:0,3,20	0/1:8,1:5:29.59:50,0,30	1/1:23,3:22:1.91:6,2,0	0/1:77,1:37:0:0,0,0	0/1:36,2:36:0.17:0,0,0	0/1:29,4:27:0:0,0,0	0/0:25,0:12:2.98:0,3,21	0/0:27,4:27:1.09:0,1,3	0/1:31,2:23:90.46:225,0,90	0/1:14,3:11:25.94:64,0,26	0/1:16,2:16:19.04:27,0,19
chr10	29385147	.	C	CAG	1041.19	PASS	AB=0.865;AC=22;AF=0.393;AN=56;BaseQRankSum=-3.472;DP=644;FS=3.860;HRun=0;HaplotypeScore=128.7320;InbreedingCoeff=0.0013;MQ=27.60;MQ0=63;MQRankSum=-0.748;QD=2.61;ReadPosRankSum=1.436;VQSLOD=2.3251;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:17,4:16:0:0,0,0	0/1:13,4:13:0.14:0,0,0	0/0:14,0:2:4.56:0,5,35	0/0:28,0:6:0.99:0,1,31	1/1:15,9:24:2.22:7,2,0	0/0:11,2:11:2.39:0,2,9	1/1:27,6:19:1.76:37,2,0	0/1:30,0:19:28.31:214,0,28	0/0:18,0:14:3.01:0,3,44	0/1:36,5:34:84.51:444,0,85	0/0:16,2:14:0:0,0,0	1/1:13,6:12:3.48:42,3,0	0/1:21,6:23:50.80:51,0,97	0/0:13,7:14:2.11:0,2,40	0/1:15,5:17:0.11:0,0,0	1/1:11,4:13:1.12:4,1,0	0/0:18,1:14:8.89:0,9,78	0/0:16,1:11:2.23:0,2,35	0/1:10,0:7:32.83:33,0,54	1/1:16,3:19:3.20:11,3,0	1/1:62,0:34:1.55:4,2,0	0/1:21,8:26:0.23:1,0,0	0/0:27,4:29:1.55:0,2,4	0/0:19,1:9:2.92:0,3,17	0/0:18,7:23:8.60:0,9,52	0/1:23,6:21:99:213,0,107	0/1:9,3:10:47.26:64,0,47	0/1:11,1:11:19.36:42,0,19
chr10	29385149	.	CAG	C	531.24	PASS	AB=0.981;AC=25;AF=0.463;AN=54;BaseQRankSum=-0.010;DP=609;FS=10.387;HRun=0;HaplotypeScore=116.6629;InbreedingCoeff=-0.0052;MQ=27.75;MQ0=61;MQRankSum=-1.311;QD=1.31;ReadPosRankSum=2.926;VQSLOD=1.7313;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:19,1:14:0:0,0,0	0/1:17,0:13:0.01:1,0,0	0/0:17,0:2:5.97:0,6,47	0/0:31,0:6:8.27:0,8,57	1/1:22,1:23:3.01:31,3,0	0/1:12,0:10:0.08:0,0,0	1/1:33,0:19:4.45:20,4,0	0/1:28,0:18:28.19:28,0,140	0/0:15,0:11:3:0,3,56	0/1:37,0:32:17.72:234,0,18	./.	1/1:17,0:12:2.51:18,3,0	0/1:25,0:22:10.37:10,0,36	0/0:19,0:13:2.93:0,3,18	0/1:19,0:17:0.08:0,0,0	0/0:12,2:12:2.87:0,3,25	0/0:17,0:12:5.50:0,5,31	1/1:13,0:7:2.88:15,3,0	0/1:9,1:8:45.36:45,0,51	0/1:19,1:20:13.14:24,0,13	0/0:55,2:33:2.27:0,2,24	0/1:26,0:23:0.02:1,0,0	1/1:32,0:29:2.76:15,3,0	0/0:17,1:8:3.01:0,3,39	0/1:23,0:21:15.95:34,0,16	0/1:25,0:20:50.19:89,0,50	0/1:11,0:9:9.41:41,0,9	1/1:10,1:10:5.97:58,6,0
chr10	29385153	.	CAGACAG	C	250.28	PASS	AB=0.987;AC=20;AF=0.357;AN=56;BaseQRankSum=1.826;DP=556;FS=7.656;HRun=0;HaplotypeScore=115.7871;InbreedingCoeff=0.1145;MQ=28.43;MQ0=45;MQRankSum=-1.162;QD=0.81;ReadPosRankSum=-3.919;VQSLOD=0.1072;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:17,0:13:0.01:0,0,0	1/1:12,0:10:2.86:41,3,0	0/0:22,0:2:6.02:0,6,74	0/0:38,0:8:16.84:0,17,275	0/0:22,0:22:0:0,0,0	0/1:11,0:9:0.15:0,0,0	0/1:25,2:18:4.39:10,0,4	0/0:28,0:18:2.25:0,2,238	0/1:13,1:11:33.75:34,0,40	0/1:33,0:31:3.57:4,0,534	0/1:12,0:10:0:0,0,0	0/0:14,0:11:3.32:0,3,17	0/1:27,0:22:20.08:20,0,74	0/0:18,0:14:3.49:0,3,36	0/1:16,0:15:0.15:0,0,0	0/1:15,0:13:0.09:0,0,0	1/1:13,2:12:12.01:122,12,0	0/0:8,1:6:2.90:0,3,16	0/1:9,0:8:33.74:34,0,123	0/1:17,0:17:5.47:11,0,5	0/0:45,1:31:2.27:0,2,23	0/1:23,0:20:0.27:0,0,0	0/1:27,0:24:0:0,0,0	0/0:18,0:8:3.01:0,3,30	1/1:20,0:19:8.80:69,9,0	0/0:20,0:18:7.83:0,8,306	0/1:11,0:10:31.34:31,0,77	0/0:8,0:7:2.49:0,2,10
chr10	29385157	.	CAG	C	1460.52	PASS	AB=0.813;AC=31;AF=0.596;AN=52;BaseQRankSum=0.382;DP=531;FS=0.823;HRun=0;HaplotypeScore=100.1947;InbreedingCoeff=-0.0108;MQ=28.69;MQ0=37;MQRankSum=-0.249;QD=3.91;ReadPosRankSum=2.214;VQSLOD=2.4566;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:13,2:12:0.08:0,0,0	1/1:6,5:10:3.01:41,3,0	0/0:23,1:2:5.84:0,6,38	0/0:44,0:8:16.97:0,17,195	./.	0/1:5,4:8:0.08:0,0,0	1/1:15,11:17:4.56:36,5,0	0/1:27,0:18:6.49:256,0,6	0/1:13,2:9:16.98:31,0,17	0/1:22,8:29:89.98:326,0,90	./.	1/1:6,7:10:2.42:28,2,0	0/1:19,7:22:30.01:54,0,30	0/0:8,10:13:2.79:0,3,18	0/0:9,6:15:0:0,0,0	1/1:8,7:13:2.89:25,3,0	1/1:8,6:12:9.50:134,10,0	1/1:8,1:6:3:27,3,0	0/1:7,1:8:61.36:61,0,62	1/1:9,6:15:1.98:33,2,0	1/1:29,14:30:3:25,3,0	0/1:14,9:20:0.02:1,0,0	0/0:17,8:22:0:0,0,0	1/1:15,3:8:3.01:46,3,0	1/1:10,9:18:14.90:153,15,0	0/1:12,6:17:64.15:234,0,64	0/1:5,5:9:49.17:62,0,49	0/1:7,1:7:4.80:16,0,5
chr10	29385159	.	G	GAC	2519.98	PASS	AB=0.876;AC=36;AF=0.667;AN=54;BaseQRankSum=-1.781;DP=543;FS=4.678;HRun=0;HaplotypeScore=98.6527;InbreedingCoeff=0.2117;MQ=28.60;MQ0=34;MQRankSum=-0.380;QD=6.27;ReadPosRankSum=0.797;VQSLOD=3.1022;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:14,0:12:0:0,0,0	1/1:7,2:9:3.01:41,3,0	0/0:26,0:2:3:0,3,27	0/0:48,0:8:17.63:0,18,182	./.	0/1:8,2:9:0.10:0,0,0	1/1:24,3:17:2.99:50,3,0	1/1:14,15:19:48.08:682,48,0	1/1:13,0:8:3.01:37,3,0	1/1:32,2:33:51:641,51,0	0/0:11,2:11:0:0,0,0	1/1:11,2:10:3.01:50,3,0	1/1:24,2:22:13.30:144,13,0	1/1:19,1:14:1.25:3,1,0	0/1:14,3:17:0:0,0,0	1/1:12,3:13:2.70:50,3,0	1/1:15,0:12:9.01:95,9,0	0/0:9,0:6:2.92:0,3,17	0/1:5,2:7:30.49:88,0,30	1/1:11,2:13:5.54:65,6,0	1/1:39,4:30:3.01:50,3,0	0/1:22,5:24:0.13:1,0,0	0/0:20,5:22:0:0,0,0	1/1:16,0:8:2.87:15,3,0	1/1:18,1:17:11.05:110,11,0	0/1:14,4:17:5.82:401,0,6	0/1:9,0:8:22.39:100,0,22	0/1:7,1:7:18.85:23,0,19
chr10	29385189	.	CAG	C	350.17	PASS	AB=0.990;AC=25;AF=0.463;AN=54;BaseQRankSum=1.432;DP=538;FS=4.472;HRun=0;HaplotypeScore=102.7046;InbreedingCoeff=-0.0088;MQ=28.74;MQ0=46;MQRankSum=-3.318;QD=1.09;ReadPosRankSum=-1.546;VQSLOD=1.2240;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:14,0:12:0:0,0,0	0/0:9,1:9:2.94:0,3,18	0/0:17,0:2:3.01:0,3,41	0/0:42,0:6:2.92:0,3,79	0/0:19,0:18:2.89:0,3,55	0/1:11,0:9:0.25:0,0,0	0/1:27,0:14:1.10:1,0,67	0/1:29,0:14:28.11:28,0,129	0/1:8,0:3:4.71:5,0,14	0/0:24,0:16:2.44:0,2,179	1/1:15,0:14:3:25,3,0	1/1:17,0:12:1.36:3,1,0	0/1:21,0:20:47.77:48,0,67	0/1:22,0:16:2.58:12,0,3	0/1:18,0:18:0.01:0,0,0	0/0:15,0:13:0.54:0,1,54	0/1:15,0:13:23.49:23,0,31	1/1:10,0:5:1.55:4,2,0	0/1:21,0:12:51.18:51,0,109	1/1:15,0:14:5.60:50,6,0	0/0:55,0:38:2.85:0,3,57	0/1:17,2:17:0:1,0,0	./.	0/0:15,0:9:2.82:0,3,24	0/1:23,1:24:24.27:64,0,24	0/1:17,0:14:39.73:40,0,119	1/1:13,0:11:16.14:88,16,0	1/1:5,0:5:5.86:36,6,0
chr10	29385191	.	GAC	G	307.80	PASS	AB=0.991;AC=17;AF=0.327;AN=52;BaseQRankSum=-0.086;DP=527;FS=1.248;HRun=0;HaplotypeScore=100.1789;InbreedingCoeff=-0.1083;MQ=24.37;MQ0=49;MQRankSum=-1.337;QD=1.10;ReadPosRankSum=0.711;VQSLOD=1.9189;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	0/0:10,0:9:1.25:0,1,3	./.	0/0:38,1:3:3.01:0,3,44	0/0:18,0:17:2.89:0,3,43	0/0:11,0:9:3:0,3,25	0/1:26,0:14:21.34:21,0,37	0/1:31,0:14:38.43:105,0,38	0/0:9,0:4:3.11:0,3,9	0/1:22,0:14:51.84:81,0,52	0/1:14,0:13:0.02:0,0,0	0/0:17,0:12:2.15:0,2,17	0/1:21,0:20:11.82:12,0,40	0/1:21,1:16:0.14:0,0,1	0/1:20,0:19:0:0,0,0	0/1:16,0:14:15.74:20,0,16	0/0:14,1:13:1.62:0,2,6	1/1:7,2:4:2.99:24,3,0	0/1:23,0:12:58.61:59,0,89	1/1:14,1:14:0.34:1,0,0	0/0:56,0:39:3.01:0,3,47	0/1:19,0:17:0:0,0,0	0/0:14,0:13:0:0,0,0	0/1:15,0:9:0:0,0,0	0/0:24,0:24:1.02:0,1,19	0/1:15,0:13:33.53:51,0,34	0/1:12,1:11:10.52:43,0,11	0/0:5,0:5:0.47:0,0,1
chr10	29385209	.	CAG	C	1706.12	PASS	AB=0.803;AC=41;AF=0.788;AN=52;BaseQRankSum=1.760;DP=449;FS=11.323;HRun=0;HaplotypeScore=97.2146;InbreedingCoeff=-0.0681;MQ=26.18;MQ0=38;MQRankSum=-0.797;QD=4.19;ReadPosRankSum=-1.257;VQSLOD=1.6988;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,1:4:3:25,3,0	1/1:5,4:8:2.99:25,3,0	./.	0/0:24,0:2:4.83:0,5,41	0/1:9,4:11:18.08:18,0,19	1/1:6,6:11:2.57:18,3,0	0/1:15,3:12:27.60:52,0,28	0/1:28,5:12:84.18:208,0,84	1/1:12,1:8:14.40:89,14,0	1/1:11,4:10:17.99:222,18,0	1/1:7,3:10:3:25,3,0	1/1:10,4:12:8.81:53,9,0	1/1:8,4:12:0.83:63,1,0	1/1:15,5:15:2.41:17,2,0	1/1:16,5:20:2.94:18,3,0	0/1:7,7:11:6.26:38,0,6	1/1:19,0:17:0.94:84,1,0	1/1:13,1:9:14.89:123,15,0	0/1:19,3:11:78.21:135,0,78	1/1:10,3:14:12.79:97,13,0	0/1:42,2:33:14.32:14,0,16	0/1:8,5:12:0:0,0,0	./.	0/1:7,2:9:0:0,0,0	1/1:16,7:23:2.84:94,3,0	0/1:13,4:13:2.03:144,0,2	1/1:5,2:8:14.21:132,14,0	1/1:8,0:8:17.90:136,18,0
chr10	29385213	.	CAG	C	1059.57	PASS	AB=0.986;AC=37;AF=0.740;AN=50;BaseQRankSum=2.313;DP=454;FS=16.549;HRun=0;HaplotypeScore=102.5504;InbreedingCoeff=-0.0463;MQ=27.51;MQ0=35;MQRankSum=0.786;QD=2.80;ReadPosRankSum=0.613;VQSLOD=1.1089;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:4,1:3:3:25,3,0	1/1:9,0:8:2.99:25,3,0	./.	0/0:22,0:2:3.90:0,4,45	1/1:11,0:9:2.57:23,3,0	1/1:14,0:13:2.57:18,3,0	0/1:19,0:13:16.73:17,0,19	0/1:31,0:12:26.52:27,0,125	1/1:15,0:10:17.27:110,17,0	1/1:13,0:9:15.13:92,15,0	1/1:11,1:12:3:25,3,0	1/1:15,0:13:8.20:47,8,0	0/1:11,0:10:10.57:37,0,11	1/1:17,2:14:1.95:15,2,0	1/1:20,0:19:2.96:19,3,0	0/1:14,0:12:3.35:3,0,7	0/1:19,0:17:19.91:65,0,20	1/1:15,0:10:15.34:123,15,0	0/0:24,0:13:0.52:0,1,109	1/1:17,0:16:14.47:114,14,0	0/1:43,1:35:14.25:14,0,25	./.	./.	0/1:13,0:10:0:0,0,0	0/1:22,0:23:4.97:89,0,5	0/1:18,0:13:8.62:86,0,9	1/1:11,0:10:12.50:60,13,0	1/1:10,0:10:21.32:156,21,0
chr10	29386491	.	G	GCAGGAACTCATCCCTC	51382.18	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-2.788;DP=649;FS=2.855;HRun=0;HaplotypeScore=183.4192;InbreedingCoeff=0.8501;MQ=49.37;MQ0=8;MQRankSum=-7.816;QD=82.48;ReadPosRankSum=4.810;VQSLOD=4.1873;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:23,5:28:36.12:2314,36,0	1/1:5,3:7:9.03:560,9,0	0/0:15,0:15:42.14:0,42,1462	0/0:11,0:11:27.09:0,27,727	1/1:21,2:26:18.06:1079,18,0	1/1:12,9:18:33.11:1896,33,0	1/1:21,3:16:30.10:2088,30,0	1/1:12,0:11:24.08:1151,24,0	1/1:17,12:21:33.11:2136,33,0	1/1:20,11:30:57.20:3439,57,0	1/1:10,3:15:6.02:384,6,0	1/1:13,7:19:27.09:1558,27,0	1/1:19,11:28:54.19:3334,54,0	1/1:24,4:25:48.16:3177,48,0	1/1:24,9:28:48.16:3444,48,0	1/1:22,14:34:45.15:3209,45,0	1/1:20,4:22:42.10:2590,42,0	1/1:14,1:19:30.10:1848,30,0	1/1:22,2:22:51.12:2833,51,0	1/1:24,5:28:42.14:2716,42,0	1/1:13,0:10:12.01:432,12,0	1/1:22,3:29:36.12:2365,36,0	1/1:12,2:14:18.06:1058,18,0	1/1:3,4:8:9.03:638,9,0	1/1:17,7:24:27.09:1905,27,0	1/1:19,10:25:42.14:2239,42,0	1/1:12,12:23:33.11:2315,33,0	1/1:2,1:4:9.03:672,9,0
chr10	29386599	.	G	GC	21648.03	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-7.915;DP=608;FS=2.416;HRun=0;HaplotypeScore=55.6631;InbreedingCoeff=0.9967;MQ=68.63;MQ0=7;MQRankSum=-3.990;QD=38.18;ReadPosRankSum=6.328;VQSLOD=4.6275;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,36:32:87.30:1389,87,0	1/1:1,8:9:21.07:336,21,0	0/0:17,0:13:38.99:0,39,508	0/0:24,0:21:53.01:0,53,592	1/1:0,33:31:90.31:1438,90,0	1/1:2,17:15:33.11:527,33,0	1/1:0,19:19:54.18:862,54,0	1/1:0,12:11:33.10:503,33,0	1/1:0,26:18:51.17:814,51,0	1/1:0,25:22:63.20:985,63,0	1/1:1,20:18:48.16:767,48,0	1/1:1,11:9:27.09:431,27,0	1/1:2,24:25:54.18:863,54,0	1/1:0,22:17:42.14:671,42,0	1/1:0,25:22:60.20:959,60,0	1/1:0,30:28:75.26:1198,75,0	1/1:0,25:22:60.20:958,60,0	1/1:1,13:13:30.10:479,30,0	1/1:2,16:17:45.15:707,45,0	1/1:0,22:18:48.16:767,48,0	1/1:0,31:31:78.02:1246,78,0	1/1:0,24:24:69.24:1100,69,0	1/1:1,20:19:51.17:815,51,0	1/1:0,17:17:45.15:719,45,0	1/1:2,24:21:54.18:862,54,0	1/1:0,22:21:57.19:910,57,0	1/1:0,15:12:33.11:526,33,0	1/1:0,17:17:51.17:815,51,0
chr10	29387546	.	TAAA	T	7527.56	PASS	AB=0.621;AC=49;AF=0.875;AN=56;BaseQRankSum=-5.668;DP=552;FS=6.448;HRun=16;HaplotypeScore=85.6559;InbreedingCoeff=0.4091;MQ=55.11;MQ0=15;MQRankSum=-1.732;QD=14.65;ReadPosRankSum=0.443;VQSLOD=3.3537;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,0:33:63.29:385,63,0	1/1:2,4:6:11.98:129,12,0	0/0:23,0:6:5.99:0,6,68	0/0:12,0:5:7.81:0,8,93	1/1:11,21:30:36.84:417,37,0	1/1:6,11:18:19.30:223,19,0	1/1:4,13:16:27.42:292,27,0	0/1:13,15:24:6.99:365,0,7	1/1:2,9:11:17.85:194,18,0	1/1:13,9:23:29.68:287,30,0	1/1:4,11:15:25.44:273,25,0	1/1:4,13:18:14.47:348,14,0	1/1:4,9:13:20.61:214,21,0	1/1:6,8:14:20.93:226,21,0	1/1:5,12:20:41.80:408,42,0	1/1:7,11:18:20.99:226,21,0	0/1:11,1:24:33.61:34,0,48	0/1:6,0:22:31.96:32,0,33	1/1:7,12:20:34.29:361,34,0	1/1:6,13:19:26.69:290,27,0	1/1:3,7:12:17.82:164,18,0	1/1:5,2:6:5.91:65,6,0	1/1:7,12:17:32.97:355,33,0	1/1:0,20:20:51.02:522,51,0	1/1:8,9:17:17.69:179,18,0	1/1:7,22:29:62.80:648,63,0	1/1:10,20:31:46.04:498,46,0	1/1:3,11:17:41.78:393,42,0
chr10	29387957	.	CA	C	349.21	PASS	AB=0.928;AC=11;AF=0.196;AN=56;BaseQRankSum=4.636;DP=501;FS=10.379;HRun=15;HaplotypeScore=151.4538;InbreedingCoeff=0.1104;MQ=67.08;MQ0=5;MQRankSum=-3.406;QD=2.30;ReadPosRankSum=2.310;VQSLOD=-0.3895;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,11:23:47.67:263,48,0	0/1:7,2:9:8.36:8,0,46	0/0:19,0:9:4.26:0,4,13	0/1:18,1:16:20.47:20,0,31	0/0:29,1:30:34.86:0,35,212	0/0:12,1:13:13.58:0,14,103	0/1:17,2:20:38.06:38,0,101	0/0:30,1:31:12.83:0,13,165	1/1:13,7:20:10.39:123,10,0	0/0:20,0:20:15.66:0,16,108	0/0:15,1:17:17.23:0,17,149	0/0:14,0:14:23.96:0,24,146	0/0:14,0:15:6.82:0,7,89	0/1:8,0:8:10:10,0,20	0/1:13,0:13:2.83:3,0,32	0/1:15,1:16:19.62:20,0,86	0/0:17,0:23:4.40:0,4,102	0/0:11,0:11:0.62:0,1,16	0/0:22,0:20:36.92:0,37,193	0/0:13,1:14:18.10:0,18,123	0/0:12,1:12:14.64:0,15,100	0/0:21,0:21:30.10:0,30,219	0/0:21,0:22:12.08:0,12,153	0/0:18,1:19:3.77:0,4,98	0/0:21,0:21:5.46:0,5,26	0/1:21,2:23:8.62:9,0,100	0/0:16,1:17:6.12:0,6,59	0/0:7,0:7:4.99:0,5,25
chr10	29387968	.	AAAAAC	A	2232.94	PASS	AB=0.983;AC=36;AF=0.643;AN=56;BaseQRankSum=2.298;DP=416;FS=7.129;HRun=0;HaplotypeScore=155.2754;InbreedingCoeff=-0.3644;MQ=53.79;MQ0=13;MQRankSum=-3.028;QD=5.55;ReadPosRankSum=0.921;VQSLOD=2.2677;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:22:48.70:377,49,0	0/1:6,1:7:13.87:98,0,14	0/0:14,0:3:5.60:0,6,41	0/1:14,0:9:0.07:0,0,56	0/1:26,0:26:11.42:84,0,11	0/1:10,0:10:4.65:80,0,5	0/1:21,0:20:18.36:105,0,18	0/1:21,0:20:16.03:79,0,16	1/1:15,0:15:34.98:285,35,0	0/1:15,0:15:3.76:63,0,4	0/1:16,1:17:25.57:110,0,26	0/1:10,1:11:7.63:56,0,8	0/1:11,0:11:22.96:87,0,23	0/1:4,0:4:7.45:38,0,7	1/1:6,0:6:10.36:62,10,0	0/1:15,0:15:25.71:138,0,26	0/1:16,0:16:0.69:15,0,1	1/1:13,0:13:3.01:43,3,0	0/1:20,0:17:59.18:59,0,60	1/1:11,0:11:4.35:66,4,0	1/1:14,0:12:2.88:35,3,0	0/1:17,0:17:30.10:48,0,30	0/1:19,1:19:25.17:159,0,25	1/1:20,0:19:1.75:13,2,0	1/1:18,0:18:9.48:72,9,0	0/1:19,0:18:20.16:53,0,20	0/1:11,0:11:3.32:113,0,3	1/1:7,0:7:5.23:41,5,0
chr10	29387969	.	A	AAC	323.22	PASS	AB=0.977;AC=13;AF=0.232;AN=56;BaseQRankSum=1.551;DP=410;FS=0.000;HRun=0;HaplotypeScore=144.6296;InbreedingCoeff=-0.0835;MQ=53.68;MQ0=13;MQRankSum=-2.094;QD=1.65;ReadPosRankSum=0.170;VQSLOD=2.4996;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:21:19.13:187,19,0	0/0:7,0:7:5.38:0,5,91	0/0:14,0:3:8.79:0,9,67	0/1:16,0:10:12.68:13,0,81	0/1:25,0:25:3.04:3,0,261	0/0:10,0:10:24.86:0,25,199	0/1:21,0:20:33.46:33,0,154	0/0:21,0:20:17.04:0,17,274	0/1:12,3:15:75.88:139,0,76	0/0:13,0:13:33.10:0,33,248	0/0:17,0:17:40.78:0,41,263	0/0:11,0:11:29.12:0,29,234	0/1:11,0:11:8.60:9,0,243	0/1:4,0:4:2.13:2,0,72	0/0:6,0:6:16.17:0,16,88	0/0:15,0:15:4.33:0,4,173	0/0:16,0:16:26.81:0,27,171	0/0:13,0:13:8.95:0,9,66	0/0:20,0:17:48.63:0,49,369	0/1:10,1:11:22.36:22,0,114	0/1:14,0:12:7.11:7,0,130	0/0:17,0:17:37.60:0,38,317	0/1:19,0:18:1.25:1,0,208	0/1:20,0:19:21.61:22,0,136	0/0:18,0:18:7.37:0,7,67	0/1:18,0:17:29.03:29,0,162	0/0:11,0:11:28.19:0,28,217	0/0:5,0:5:11.84:0,12,88
chr10	29387970	.	AAACAAAAAAAACAAAAAACAAAAAACAAAAAAAAAAAACAC	A	4051.08	PASS	AB=1.000;AC=22;AF=0.393;AN=56;BaseQRankSum=9.666;DP=404;FS=7.816;HRun=0;HaplotypeScore=400.4069;InbreedingCoeff=-0.5511;MQ=53.56;MQ0=13;MQRankSum=-4.370;QD=13.41;ReadPosRankSum=8.022;VQSLOD=0.1234;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:21:99:310,0,720	0/1:7,0:7:99:340,0,129	0/0:15,0:3:5.72:0,6,152	0/0:15,0:9:15.04:0,15,477	0/1:24,0:24:99:156,0,705	0/1:10,0:10:99:138,0,513	0/1:20,0:19:99:218,0,1054	0/0:21,0:20:47.94:0,48,1115	0/1:15,0:15:99:536,0,603	0/0:13,0:13:12.94:0,13,905	0/1:17,0:17:98.50:99,0,830	0/1:11,0:11:64:64,0,484	0/1:11,0:11:99:186,0,366	0/0:4,0:4:8.92:0,9,249	0/1:6,0:6:64.46:64,0,328	0/1:15,0:15:99:389,0,602	0/1:16,0:16:11.86:12,0,59	1/1:2,11:13:3.01:306,3,0	0/1:20,0:17:99:130,0,1239	0/1:10,0:10:72.28:72,0,507	0/0:14,0:12:11.37:0,11,592	0/1:15,0:15:94.36:94,0,576	0/1:18,0:18:99:332,0,755	0/0:20,0:19:29.93:0,30,576	0/1:18,0:18:81.29:154,0,81	0/1:17,0:16:99:160,0,587	0/1:11,0:11:99:205,0,551	0/1:5,0:5:76.60:87,0,77
chr10	29387972	.	AC	A	1852.45	PASS	AB=0.979;AC=42;AF=0.750;AN=56;BaseQRankSum=3.262;DP=371;FS=0.000;HRun=1;HaplotypeScore=128.3933;InbreedingCoeff=-0.3004;MQ=53.95;MQ0=13;MQRankSum=-4.223;QD=4.99;ReadPosRankSum=4.980;VQSLOD=0.4876;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:19:35.07:147,35,0	0/1:7,0:7:5.58:52,0,6	0/1:13,1:4:10.56:11,0,28	0/1:13,2:9:6.98:7,0,27	0/1:24,0:24:36.99:72,0,37	1/1:9,0:9:1.87:53,2,0	0/1:19,0:18:1.27:122,0,1	0/1:19,0:18:1.55:96,0,2	1/1:15,0:15:31.50:177,31,0	1/1:13,0:13:24.74:147,25,0	1/1:16,1:17:14.80:116,15,0	0/1:11,0:11:12.19:33,0,12	1/1:9,0:9:5.33:69,5,0	1/1:4,0:4:7.25:57,7,0	1/1:6,0:6:13.96:70,14,0	1/1:15,0:15:4.05:87,4,0	0/1:6,0:6:4.17:13,0,4	1/1:11,0:11:2.92:17,3,0	0/1:18,1:16:14.71:115,0,15	1/1:10,0:10:4.40:63,4,0	0/1:13,0:11:5.25:46,0,5	0/1:12,0:12:42.47:45,0,42	0/1:19,0:18:11.20:129,0,11	0/1:18,0:17:23.59:33,0,24	1/1:18,0:18:7.13:22,7,0	0/1:13,1:13:24.99:67,0,25	1/1:11,0:11:19.86:112,20,0	1/1:3,0:3:4.53:16,5,0
chr10	29387973	.	CA	C	2867.17	PASS	AC=50;AF=0.926;AN=54;BaseQRankSum=0.814;DP=354;FS=5.513;HRun=15;HaplotypeScore=124.4448;InbreedingCoeff=0.4632;MQ=52.16;MQ0=13;MQRankSum=0.375;QD=8.85;ReadPosRankSum=1.350;VQSLOD=2.3627;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,9:19:37.25:223,37,0	1/1:2,1:6:12.98:85,13,0	0/0:12,0:2:0.47:0,0,1	0/0:15,0:9:8.97:0,9,87	1/1:10,10:23:17.84:138,18,0	1/1:5,3:9:2.22:67,2,0	1/1:8,7:17:31.68:245,32,0	1/1:9,2:18:19.90:133,20,0	1/1:8,2:15:28.64:161,29,0	1/1:9,4:13:19.94:133,20,0	1/1:7,6:16:25.12:208,25,0	1/1:5,3:9:8.34:64,8,0	1/1:7,0:8:7.85:41,8,0	1/1:4,0:4:4.53:18,5,0	1/1:2,3:6:12:108,12,0	1/1:6,4:14:30.27:215,30,0	./.	1/1:11,0:11:2.22:7,2,0	1/1:10,7:16:28.64:213,29,0	1/1:7,1:9:17.43:123,17,0	1/1:8,5:11:11.53:83,12,0	1/1:6,3:11:12.91:91,13,0	1/1:12,4:18:31.30:223,31,0	1/1:5,9:16:8.50:78,8,0	1/1:17,0:18:4.69:23,5,0	1/1:7,4:12:20.13:160,20,0	1/1:6,3:11:16.34:104,16,0	1/1:2,0:3:5.21:22,5,0
chr10	29387979	.	AAACAAAAAACAAAAAACAAAAAAAAAAAAC	A	14090.55	PASS	AB=1.000;AC=49;AF=0.875;AN=56;BaseQRankSum=0.940;DP=307;FS=1.451;HRun=0;HaplotypeScore=215.7771;InbreedingCoeff=0.4022;MQ=42.30;MQ0=14;MQRankSum=0.077;QD=50.69;ReadPosRankSum=2.537;VQSLOD=4.0735;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:18:45.10:1454,45,0	1/1:5,0:5:15.04:892,15,0	0/0:13,0:2:6.02:0,6,199	0/0:15,0:5:3.98:0,4,228	1/1:18,0:18:17.68:712,18,0	1/1:9,0:8:3.14:476,3,0	0/1:14,0:13:87.57:802,0,88	1/1:15,0:14:3.91:112,4,0	1/1:14,0:14:32.72:1272,33,0	1/1:12,0:11:18.20:130,18,0	1/1:14,0:14:25.19:677,25,0	1/1:8,0:8:8.88:290,9,0	1/1:5,0:5:8.66:443,9,0	1/1:4,0:4:6.30:164,6,0	1/1:4,0:4:12.01:304,12,0	1/1:10,1:11:33.06:1287,33,0	0/0:1,0:1:0:0,0,0	1/1:11,0:11:3.01:209,3,0	1/1:19,0:16:18.24:650,18,0	1/1:6,0:6:17.76:322,18,0	1/1:9,0:7:11.77:89,12,0	1/1:9,0:9:15.03:565,15,0	1/1:16,0:14:32.77:1260,33,0	1/1:15,0:14:11.32:132,11,0	1/1:2,16:18:5.93:464,6,0	1/1:11,0:10:21.02:582,21,0	1/1:9,0:9:17.79:553,18,0	1/1:3,0:3:5.85:247,6,0
chr10	29387982	.	CAAA	C	1227.49	PASS	AC=48;AF=0.889;AN=54;BaseQRankSum=2.833;DP=261;FS=0.000;HRun=8;HaplotypeScore=123.1693;InbreedingCoeff=0.3840;MQ=43.42;MQ0=14;MQRankSum=0.756;QD=5.34;ReadPosRankSum=3.412;VQSLOD=-0.7544;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:8,8:16:36.05:276,36,0	1/1:5,0:5:10.17:67,10,0	0/0:11,0:2:5.66:0,6,33	0/0:17,0:6:7.87:0,8,98	1/1:14,0:14:7.71:43,8,0	1/1:8,0:7:5.94:42,6,0	1/1:12,0:11:7.73:62,8,0	1/1:14,0:13:7.09:27,7,0	1/1:8,0:8:15.47:135,15,0	1/1:11,0:10:0.56:1,1,0	1/1:11,0:11:1.70:33,2,0	1/1:5,0:5:6.14:35,6,0	1/1:3,1:4:5.95:49,6,0	0/0:3,0:3:2.84:0,3,14	1/1:4,0:4:2.90:16,3,0	1/1:10,0:10:14.89:112,15,0	./.	1/1:11,0:11:2.98:21,3,0	1/1:17,0:14:15.34:87,15,0	1/1:4,0:4:5.44:25,5,0	1/1:9,0:7:4.55:18,5,0	1/1:5,1:6:4.74:37,5,0	1/1:11,1:10:12.79:75,13,0	1/1:14,0:13:4.72:17,5,0	1/1:17,0:17:5.97:44,6,0	1/1:8,0:7:8.29:47,8,0	1/1:7,0:7:5.98:52,6,0	1/1:3,0:3:3.46:24,3,0
chr10	29387984	.	AAAAACAAAAAACAAAAAAAAAAAAC	A	10188.44	PASS	AB=0.900;AC=48;AF=0.889;AN=54;BaseQRankSum=4.170;DP=241;FS=8.081;HRun=0;HaplotypeScore=166.2811;InbreedingCoeff=0.1773;MQ=43.17;MQ0=13;MQRankSum=0.380;QD=46.31;ReadPosRankSum=4.531;VQSLOD=2.7711;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:16:36.50:1474,37,0	1/1:1,4:5:12.04:723,12,0	0/0:13,0:4:11.80:0,12,182	0/1:16,0:6:22.83:23,0,264	1/1:10,3:13:8.98:506,9,0	1/1:7,1:7:6.02:351,6,0	0/1:9,3:11:48.50:524,0,48	1/1:12,0:11:2.54:7,3,0	1/1:3,5:8:15.52:971,16,0	0/0:8,0:7:1.16:0,1,3	1/1:7,3:10:9.17:419,9,0	1/1:3,1:4:5.38:200,5,0	1/1:1,1:2:6.02:378,6,0	1/1:1,0:1:3.01:92,3,0	1/1:3,1:4:3.01:183,3,0	1/1:5,4:9:15.05:905,15,0	./.	1/1:11,0:11:3.01:174,3,0	1/1:15,2:14:1.07:379,1,0	1/1:1,1:2:3.01:174,3,0	1/1:6,0:5:1.36:3,1,0	1/1:4,2:6:11.40:415,11,0	1/1:8,3:9:18.06:921,18,0	1/1:11,3:13:7.54:50,8,0	1/1:16,1:17:6.02:362,6,0	1/1:6,2:7:8.52:378,9,0	1/1:4,2:6:6.01:384,6,0	1/1:1,1:2:3.48:194,3,0
chr10	29387985	.	A	AC	612.20	PASS	AB=0.972;AC=38;AF=0.731;AN=52;BaseQRankSum=0.689;DP=155;FS=5.342;HRun=0;HaplotypeScore=89.8250;InbreedingCoeff=0.3194;MQ=48.20;MQ0=13;MQRankSum=1.618;QD=5.14;ReadPosRankSum=1.127;VQSLOD=2.5384;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:15,5:20:27.12:177,27,0	1/1:4,0:4:4.55:36,5,0	0/0:13,0:4:8.19:0,8,51	0/1:16,1:6:6.66:7,0,60	1/1:3,0:3:8.38:45,8,0	0/1:3,0:2:1.73:11,0,2	1/1:4,1:4:10.62:59,11,0	1/1:5,0:4:0.46:1,0,0	1/1:5,0:5:9.93:40,10,0	0/0:2,0:1:0:0,0,0	1/1:4,0:4:5.58:38,6,0	0/0:2,0:2:0:0,0,0	1/1:2,0:2:4.78:18,5,0	1/1:1,0:1:1.55:4,2,0	1/1:1,0:1:2.84:14,3,0	1/1:5,0:5:3.86:33,4,0	0/0:1,0:1:0:0,0,0	0/0:11,0:11:2.22:0,2,7	1/1:7,1:5:8.15:70,8,0	1/1:2,0:2:2.60:10,3,0	./.	1/1:3,0:3:4.52:39,5,0	1/1:9,0:7:16.35:82,16,0	./.	1/1:17,0:17:4.21:23,4,0	1/1:3,0:2:2.28:10,2,0	1/1:2,0:2:0.02:3,0,0	0/0:1,0:1:0.47:0,0,1
chr10	29387995	.	AC	A	4160.48	PASS	AB=0.967;AC=53;AF=0.946;AN=56;BaseQRankSum=-0.535;DP=377;FS=0.000;HRun=1;HaplotypeScore=165.2929;InbreedingCoeff=0.0969;MQ=51.67;MQ0=7;MQRankSum=0.066;QD=11.04;ReadPosRankSum=-0.023;VQSLOD=1.6370;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:20,0:19:12.74:51,0,13	1/1:6,0:6:17.60:119,18,0	0/1:18,1:8:3.60:4,0,39	0/1:18,1:10:39.77:40,0,46	1/1:11,0:11:32.13:205,32,0	1/1:10,1:10:29.25:194,29,0	1/1:12,1:13:14.98:177,15,0	1/1:8,3:10:28.26:172,28,0	1/1:7,7:14:32.78:158,33,0	1/1:13,1:13:28.58:185,29,0	1/1:7,3:10:26.64:182,27,0	1/1:15,1:16:35.15:226,35,0	1/1:7,0:7:14.49:84,14,0	1/1:11,1:12:21.13:137,21,0	1/1:10,1:11:23.07:148,23,0	1/1:18,0:18:40.54:253,41,0	1/1:12,0:12:2.85:13,3,0	1/1:11,0:11:2.74:12,3,0	1/1:7,1:8:23.29:153,23,0	1/1:13,3:16:43.31:255,43,0	1/1:8,1:8:11.77:76,12,0	1/1:13,2:15:34.49:232,34,0	1/1:17,1:16:33.69:215,34,0	1/1:15,0:15:9.38:65,9,0	1/1:18,0:18:8.66:59,9,0	1/1:15,1:15:43.88:312,44,0	1/1:17,0:17:46.37:287,46,0	1/1:6,4:10:22.90:147,23,0
chr10	29387998	.	AAAAAAAAAAAC	A	10291.85	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=2.022;DP=401;FS=5.659;HRun=0;HaplotypeScore=194.3774;InbreedingCoeff=0.8142;MQ=51.45;MQ0=5;MQRankSum=-1.636;QD=29.49;ReadPosRankSum=2.394;VQSLOD=3.9003;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:14,8:21:56.94:976,57,0	1/1:6,0:6:18.06:389,18,0	0/0:19,0:8:18.21:0,18,365	0/0:20,0:11:26.64:0,27,462	1/1:13,0:13:35.94:502,36,0	1/1:12,0:11:33.04:438,33,0	1/1:13,0:13:15.52:440,16,0	1/1:12,0:12:35.34:318,35,0	1/1:16,0:16:38.99:636,39,0	1/1:16,0:15:35.09:363,35,0	1/1:10,0:10:26.90:355,27,0	1/1:18,0:18:39.08:484,39,0	1/1:8,0:8:15.05:279,15,0	1/1:12,0:12:21.53:237,22,0	1/1:11,0:11:24:296,24,0	1/1:20,0:20:44.33:719,44,0	0/0:13,0:13:11.83:0,12,83	1/1:11,0:11:3.01:76,3,0	1/1:10,0:10:17.68:350,18,0	1/1:17,0:17:40.58:461,41,0	1/1:9,0:9:11.19:88,11,0	1/1:17,0:17:38.83:440,39,0	1/1:18,0:16:35.24:554,35,0	1/1:16,0:16:1.18:177,1,0	1/1:18,0:18:9.03:204,9,0	1/1:16,0:15:44.93:539,45,0	1/1:18,0:18:48.09:670,48,0	1/1:10,0:10:23.95:299,24,0
chr10	29387999	.	A	AC	412.60	PASS	AB=1.000;AC=4;AF=0.071;AN=56;BaseQRankSum=2.689;DP=407;FS=0.858;HRun=0;HaplotypeScore=178.5018;InbreedingCoeff=0.3914;MQ=52.85;MQ0=5;MQRankSum=-3.808;QD=8.09;ReadPosRankSum=4.393;VQSLOD=3.6266;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,14:21:49.91:504,50,0	0/0:6,0:6:9.24:0,9,55	0/0:20,0:9:17.49:0,17,161	0/1:20,0:11:3.64:4,0,194	0/0:15,0:15:8.84:0,9,81	0/0:12,0:11:28.59:0,29,171	0/0:13,0:13:24:0,24,135	0/0:13,0:13:31.56:0,32,179	0/0:16,0:16:24.34:0,24,165	0/0:16,0:15:34.03:0,34,233	0/0:10,0:10:15.80:0,16,93	0/0:18,0:18:32.23:0,32,196	0/0:8,0:8:6.37:0,6,44	0/0:12,0:12:18.39:0,18,104	0/0:11,0:11:18.76:0,19,111	0/0:20,0:20:25.62:0,26,157	0/0:13,0:13:11.48:0,11,74	0/0:11,0:11:2.37:0,2,8	0/0:10,0:10:24.12:0,24,139	0/0:17,0:17:42.21:0,42,242	0/1:9,0:9:8.75:9,0,22	0/0:18,0:18:35.54:0,36,240	0/0:18,0:16:23.16:0,23,116	0/0:16,0:16:11.55:0,12,69	0/0:18,0:18:6.33:0,6,28	0/0:16,0:15:40.89:0,41,263	0/0:19,0:19:40:0,40,252	0/0:10,0:10:16.31:0,16,69
chr10	29388005	.	A	AC	1881.05	PASS	AB=0.977;AC=41;AF=0.732;AN=56;BaseQRankSum=-3.607;DP=446;FS=110.381;HRun=0;HaplotypeScore=176.2354;InbreedingCoeff=0.2573;MQ=56.11;MQ0=5;MQRankSum=1.225;QD=5.02;ReadPosRankSum=-3.473;VQSLOD=0.1806;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:23:15.56:0,16,55	0/1:6,0:6:0.09:44,0,0	0/0:22,0:12:19.95:0,20,230	0/1:21,0:12:7.40:7,0,200	1/1:14,2:16:15.73:87,16,0	1/1:11,1:11:10.33:117,10,0	1/1:15,0:15:11.60:109,12,0	1/1:16,0:16:1.79:66,2,0	0/1:18,0:18:23.08:23,0,50	1/1:18,0:17:27.31:176,27,0	1/1:12,0:12:17.35:81,17,0	1/1:20,1:21:22.45:154,22,0	1/1:8,0:8:5.08:47,5,0	1/1:14,0:14:19.74:102,20,0	1/1:12,0:12:10.22:98,10,0	1/1:23,1:24:4.74:98,5,0	0/0:14,0:14:14.55:0,15,97	0/0:11,0:11:2.37:0,2,8	1/1:11,1:12:3.41:93,3,0	0/1:19,0:19:32.65:105,0,33	1/1:11,0:11:11.21:59,11,0	1/1:18,1:19:3.06:94,3,0	0/1:18,1:17:18.86:26,0,19	0/1:16,1:17:13.61:14,0,19	0/1:17,1:18:6.94:7,0,10	1/1:16,1:16:9.58:174,10,0	1/1:18,2:20:23.41:195,23,0	1/1:10,0:10:8.08:70,8,0
chr10	29388008	.	ACAC	A	871.23	PASS	AB=0.997;AC=28;AF=0.500;AN=56;BaseQRankSum=2.870;DP=480;FS=44.481;HRun=0;HaplotypeScore=193.2875;InbreedingCoeff=-0.2825;MQ=58.46;MQ0=4;MQRankSum=-5.548;QD=2.26;ReadPosRankSum=4.270;VQSLOD=1.2363;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:27:43.88:217,44,0	0/1:6,0:6:18.28:32,0,18	0/0:24,0:14:4.99:0,5,447	0/0:23,0:13:10.12:0,10,443	1/1:16,0:16:9.35:58,9,0	0/1:13,0:12:28.41:28,0,60	0/1:17,0:17:21.67:22,0,32	0/1:18,0:18:0.28:0,0,72	0/1:20,0:20:48.99:49,0,50	0/0:20,0:19:14.07:0,14,99	0/1:12,0:12:26.72:28,0,27	0/1:21,0:21:19.53:29,0,20	0/1:8,0:8:11.41:13,0,11	0/0:14,0:14:4.74:0,5,18	0/1:13,0:13:0.85:1,0,53	0/1:25,0:25:12.10:74,0,12	1/1:0,8:15:14.82:133,15,0	1/1:11,0:11:3:29,3,0	0/1:14,0:14:39.64:65,0,40	0/1:19,0:20:7.81:8,0,73	0/0:14,0:14:2.41:0,2,12	0/1:20,0:20:23.25:23,0,67	0/1:19,0:17:18.46:82,0,18	0/1:18,0:18:20.78:40,0,21	1/1:18,0:18:6.64:51,7,0	0/1:19,0:19:16.72:17,0,116	0/1:24,0:24:28.62:29,0,34	0/1:10,0:10:2.89:3,0,27
chr10	29388009	.	C	CAA	12715.12	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-0.743;DP=507;FS=0.000;HRun=12;HaplotypeScore=151.8887;InbreedingCoeff=0.8316;MQ=60.78;MQ0=3;MQRankSum=-2.893;QD=29.50;ReadPosRankSum=4.243;VQSLOD=3.8023;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:27:74.58:797,75,0	1/1:4,2:6:17.78:235,18,0	0/0:26,0:16:30.08:0,30,364	0/0:24,0:13:15.64:0,16,350	1/1:3,13:16:39.13:647,39,0	1/1:4,13:17:20.09:501,20,0	1/1:4,14:18:30.02:506,30,0	1/1:2,18:21:57.16:842,57,0	1/1:7,15:22:41.24:451,41,0	1/1:2,18:20:52.36:839,52,0	1/1:4,9:13:27.09:456,27,0	1/1:1,20:21:39.13:651,39,0	1/1:2,7:9:12.79:182,13,0	1/1:1,13:14:21.07:377,21,0	1/1:3,12:17:24.08:413,24,0	1/1:5,20:25:44.72:683,45,0	0/0:15,0:15:0.60:0,1,3	0/0:11,0:11:2.84:0,3,14	1/1:3,10:14:36.47:514,36,0	1/1:8,13:21:59.86:886,60,0	1/1:1,14:16:12.04:184,12,0	1/1:4,17:21:45.11:697,45,0	1/1:7,13:19:35.90:522,36,0	1/1:3,15:18:18.06:215,18,0	1/1:18,1:19:7.57:87,8,0	1/1:2,17:19:53.21:895,53,0	1/1:2,22:24:45.89:777,46,0	1/1:1,9:10:23.11:359,23,0
chr10	29388613	.	ACCCCAGGCTCCTATCTGGG	A	60847.24	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=9.332;DP=661;FS=11.529;HRun=0;HaplotypeScore=397.9564;InbreedingCoeff=0.9705;MQ=67.54;MQ0=0;MQRankSum=-13.013;QD=103.66;ReadPosRankSum=4.268;VQSLOD=3.8883;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,29:35:51.13:2620,51,0	1/1:2,5:7:12.04:658,12,0	0/0:19,0:19:50.20:0,50,2691	0/0:17,0:17:47.16:0,47,2071	1/1:1,21:22:51.18:2698,51,0	1/1:1,18:19:45.15:2465,45,0	1/1:7,25:32:42.14:2254,42,0	1/1:7,25:31:75.22:2692,75,0	1/1:4,24:28:66.23:3571,66,0	1/1:2,28:30:78.24:3995,78,0	1/1:5,13:18:30.10:1554,30,0	1/1:3,24:27:66.23:3620,66,0	1/1:7,22:29:54.19:2961,54,0	1/1:4,31:36:81.28:4438,81,0	1/1:4,29:33:81.28:4418,81,0	1/1:4,22:26:54.19:2919,54,0	0/0:26,0:26:78.27:0,78,5912	0/0:12,0:12:36.12:0,36,2947	1/1:10,11:21:32.81:1281,33,0	1/1:5,18:23:45.15:2380,45,0	1/1:2,8:10:18.02:702,18,0	1/1:6,23:29:51.18:2701,51,0	1/1:2,10:12:24.08:1316,24,0	1/1:6,13:19:18.06:925,18,0	1/1:3,26:29:51.18:2797,51,0	1/1:2,39:41:99:4650,102,0	1/1:3,18:22:51.18:2758,51,0	1/1:4,3:7:9.03:476,9,0
chr10	29389140	.	C	CCAAGGG	39766.38	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=3.184;DP=827;FS=0.360;HRun=0;HaplotypeScore=195.5361;InbreedingCoeff=0.9818;MQ=71.96;MQ0=0;MQRankSum=-16.068;QD=60.44;ReadPosRankSum=-2.238;VQSLOD=4.5578;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,117,2268	1/1:19,0:19:42.14:1341,42,0	0/0:23,0:23:39.11:0,39,724	0/0:23,0:23:27.06:0,27,493	1/1:30,0:30:66.18:2026,66,0	1/1:27,0:27:51.15:1534,51,0	1/1:29,0:29:48.09:1379,48,0	1/1:31,0:31:51.15:1420,51,0	1/1:30,0:30:60.19:1852,60,0	1/1:31,0:31:63.22:2048,63,0	1/1:14,1:17:30.10:960,30,0	1/1:45,3:50:99:3382,105,0	1/1:29,1:32:54.19:1802,54,0	1/1:33,0:33:75.23:2305,75,0	1/1:30,0:30:51.17:1706,51,0	1/1:24,0:24:54.19:1778,54,0	0/0:44,0:44:99:0,120,2502	0/0:33,0:33:90.30:0,90,1897	1/1:16,0:16:10.12:763,10,0	1/1:35,0:35:60.15:1920,60,0	1/1:37,0:37:43.02:1050,43,0	1/1:27,0:27:63.22:2011,63,0	1/1:21,0:21:39.13:1215,39,0	1/1:26,0:26:40.38:1251,40,0	1/1:34,0:35:78.25:2471,78,0	1/1:41,0:41:99:3154,102,0	1/1:24,1:28:63.20:1998,63,0	1/1:9,0:9:12.04:402,12,0
chr10	29389156	.	G	GGGC	15210.91	PASS	AB=0.637;AC=23;AF=0.411;AN=56;BaseQRankSum=19.165;DP=733;FS=10.205;HRun=0;HaplotypeScore=214.3994;InbreedingCoeff=-0.6970;MQ=70.65;MQ0=0;MQRankSum=-16.478;QD=26.45;ReadPosRankSum=12.264;VQSLOD=2.8391;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,141,2430	0/1:6,12:18:99:516,0,195	0/0:19,0:19:57.17:0,57,1005	0/0:17,0:17:42.14:0,42,743	0/1:4,20:24:56.08:806,0,56	0/1:6,14:20:99:597,0,161	0/1:15,11:26:99:528,0,452	0/1:16,7:26:99:379,0,652	0/1:7,14:22:99:678,0,133	0/1:9,21:30:99:900,0,220	0/1:4,9:13:72.42:373,0,72	0/1:15,29:44:99:1290,0,365	0/1:10,17:27:99:751,0,256	0/1:12,19:31:99:844,0,344	0/1:9,17:26:99:684,0,323	0/1:5,16:21:86.97:744,0,87	0/0:44,0:44:99:0,129,2340	0/0:30,0:30:90.31:0,90,1678	0/1:19,3:22:99:180,0,661	0/1:7,18:25:99:809,0,175	0/1:23,8:31:99:300,0,811	0/1:9,18:27:99:832,0,251	0/1:7,9:16:99:408,0,258	0/1:12,10:22:99:421,0,285	0/1:13,21:34:99:910,0,393	0/1:7,29:36:99:1321,0,106	0/1:12,15:27:99:774,0,171	0/1:3,4:7:99:165,0,117
chr10	29389158	.	A	AGAT	15286.15	PASS	AB=0.650;AC=27;AF=0.482;AN=56;BaseQRankSum=17.014;DP=731;FS=6.121;HRun=0;HaplotypeScore=211.3220;InbreedingCoeff=-0.3924;MQ=68.77;MQ0=0;MQRankSum=-16.996;QD=26.45;ReadPosRankSum=7.519;VQSLOD=3.5764;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:32.77:0,33,841	0/1:6,12:18:79.61:458,0,80	0/0:16,0:16:48.12:0,48,828	0/0:17,0:17:45.07:0,45,750	1/1:5,20:25:43.87:863,44,0	0/1:6,14:20:39.34:593,0,39	0/1:15,11:26:99:499,0,192	0/1:22,7:29:99:287,0,296	0/1:6,15:21:43.37:669,0,43	0/1:8,21:29:18.90:904,0,19	0/1:6,9:15:26.39:395,0,26	0/1:13,28:42:99:1275,0,108	0/1:11,17:28:31.50:836,0,32	0/1:10,19:29:99:825,0,112	0/1:10,17:27:79.92:731,0,80	1/1:5,16:21:7.56:727,8,0	0/0:42,0:42:99:0,126,2312	0/0:30,0:30:90.28:0,90,1639	0/1:18,3:21:99:168,0,241	0/1:8,18:26:8.72:859,0,9	0/1:24,8:32:99:328,0,299	0/1:9,18:27:59.82:808,0,60	0/1:6,9:15:99:361,0,124	0/1:12,10:22:77.51:438,0,78	0/1:13,21:34:99:915,0,139	1/1:7,29:36:1.42:1276,1,0	0/1:12,15:27:45.58:816,0,46	1/1:4,4:8:20.98:252,21,0
chr10	29389601	.	AG	A	1414.61	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.966;DP=540;FS=0.659;HRun=1;HaplotypeScore=56.9360;InbreedingCoeff=0.9432;MQ=85.18;MQ0=0;MQRankSum=-4.246;QD=36.27;ReadPosRankSum=1.407;VQSLOD=3.7699;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,39:39:99:1509,108,0	0/0:5,0:5:15.05:0,15,239	0/0:21,0:21:62.29:0,62,910	0/0:21,0:20:12.40:0,12,666	0/0:17,0:17:48.16:0,48,766	0/0:17,0:17:51.16:0,51,792	0/0:25,0:25:75.24:0,75,1176	0/0:22,0:22:66.21:0,66,1032	0/0:18,0:18:54.18:0,54,861	0/0:23,0:23:66.22:0,66,1051	0/0:20,0:20:51.17:0,51,812	0/0:20,0:20:60.20:0,60,957	0/0:22,0:22:66.23:0,66,1052	0/0:26,0:26:75.17:0,75,1135	0/0:19,0:19:57.19:0,57,907	0/0:19,0:19:54.18:0,54,845	0/0:22,0:22:66.21:0,66,1031	0/0:11,0:11:33.11:0,33,525	0/0:19,0:19:57.11:0,57,832	0/0:16,0:16:45.15:0,45,719	0/0:23,0:23:69.24:0,69,1103	0/0:22,0:22:66.11:0,66,978	0/0:14,0:14:42.14:0,42,658	0/0:15,0:15:45.15:0,45,719	0/0:18,0:18:48.15:0,48,742	0/0:18,0:18:54.18:0,54,842	0/0:23,0:22:69.23:0,69,1083	0/0:5,0:5:15.05:0,15,240
chr10	29389979	.	TTCTCTCTC	T	596.79	PASS	AB=1.000;AC=12;AF=0.222;AN=54;BaseQRankSum=5.003;DP=561;FS=1.254;HRun=0;HaplotypeScore=129.9738;InbreedingCoeff=0.1136;MQ=67.63;MQ0=17;MQRankSum=-0.317;QD=3.23;ReadPosRankSum=-0.868;VQSLOD=2.5587;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:30:8.98:0,9,73	1/1:3,0:3:3:27,3,0	./.	0/0:31,0:15:2.82:0,3,23	0/0:15,0:15:2.99:0,3,24	0/0:20,0:20:5.50:0,6,46	0/0:26,0:25:9.46:0,9,76	0/0:29,0:26:5.79:0,6,37	0/1:25,0:24:99:132,0,143	0/0:17,0:16:17.90:0,18,114	0/0:16,0:16:0.47:0,0,1	0/1:23,0:23:15.91:67,0,16	0/0:21,0:20:6.22:0,6,43	0/1:21,0:21:4.10:4,0,19	0/0:24,0:24:11.99:0,12,100	0/1:22,0:22:46.70:92,0,47	1/1:16,14:30:3.01:75,3,0	1/1:16,0:16:17.90:265,18,0	0/0:18,0:17:0.89:0,1,2	0/0:16,0:16:2.99:0,3,25	0/0:18,0:17:5.99:0,6,48	0/0:14,0:13:5.98:0,6,47	0/0:10,0:10:0.47:0,0,1	0/0:25,0:24:14.47:0,14,105	0/0:20,0:20:8.99:0,9,75	0/1:21,0:21:33.46:33,0,153	0/1:24,0:23:38.21:38,0,59	0/0:7,0:6:2.99:0,3,24
chr10	29390009	.	CTCTCTCTCTCTCTCTG	C	4574.09	PASS	AB=1.000;AC=45;AF=0.833;AN=54;BaseQRankSum=-4.531;DP=530;FS=0.000;HRun=0;HaplotypeScore=158.5759;InbreedingCoeff=0.4167;MQ=50.38;MQ0=33;MQRankSum=1.277;QD=10.79;ReadPosRankSum=-4.952;VQSLOD=1.1988;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:38,0:34:65.28:65,0,275	1/1:1,4:5:5.93:125,6,0	0/0:17,0:1:2.37:0,2,8	./.	1/1:3,13:16:3.01:37,3,0	1/1:16,0:15:18.49:190,18,0	1/1:22,0:20:35.81:281,36,0	1/1:14,0:11:16.27:120,16,0	1/1:26,0:25:35.77:540,36,0	1/1:19,0:19:33.39:283,33,0	1/1:16,0:16:23.97:198,24,0	1/1:6,16:22:5.81:179,6,0	1/1:21,0:21:41.85:333,42,0	1/1:14,0:14:20.97:236,21,0	1/1:21,0:21:1.14:107,1,0	1/1:6,22:28:8.58:290,9,0	0/0:30,0:29:29.63:0,30,835	0/0:20,0:20:20.88:0,21,799	0/1:6,0:6:8.81:45,0,9	0/1:9,0:9:2.03:104,0,2	1/1:23,0:21:20.96:177,21,0	1/1:15,0:13:15:175,15,0	1/1:9,0:9:20.97:173,21,0	1/1:27,0:25:29.51:295,30,0	1/1:12,0:11:15:154,15,0	1/1:21,0:21:36.63:333,37,0	1/1:21,0:20:10.26:109,10,0	1/1:3,0:3:3:25,3,0
chr10	29390011	.	CTCTCTCTCTCTCTG	C	4789.30	PASS	AB=1.000;AC=50;AF=0.926;AN=54;BaseQRankSum=-3.222;DP=523;FS=0.844;HRun=0;HaplotypeScore=144.5794;InbreedingCoeff=0.3619;MQ=51.77;MQ0=34;MQRankSum=1.981;QD=10.48;ReadPosRankSum=-5.086;VQSLOD=2.0649;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:35,0:31:58.50:141,0,59	1/1:5,0:5:5.93:93,6,0	1/1:22,0:4:0.35:9,0,0	./.	1/1:16,0:16:2.92:17,3,0	1/1:17,0:16:21.43:214,21,0	1/1:22,0:20:35.81:281,36,0	1/1:14,0:11:17.05:121,17,0	1/1:27,0:26:38.77:523,39,0	1/1:19,0:19:39.92:318,40,0	1/1:16,0:16:23.97:198,24,0	1/1:22,0:22:6.02:192,6,0	1/1:17,0:17:41.85:333,42,0	1/1:14,0:14:20.97:203,21,0	1/1:21,0:21:20.82:174,21,0	1/1:28,0:28:8.58:230,9,0	0/0:30,0:29:29.18:0,29,620	0/1:18,0:18:3.11:3,0,475	1/1:6,0:6:9.45:76,9,0	1/1:9,0:9:18.45:150,18,0	1/1:20,0:18:20.96:177,21,0	1/1:16,0:14:17.99:168,18,0	1/1:10,0:10:23.97:198,24,0	1/1:27,0:25:29.50:257,30,0	1/1:12,0:11:17.99:155,18,0	1/1:20,0:20:36.25:379,36,0	1/1:9,12:20:11.08:155,11,0	1/1:3,0:3:3:25,3,0
chr10	29390023	.	CTG	C	5221.69	PASS	AB=1.000;AC=51;AF=0.911;AN=56;BaseQRankSum=-3.352;DP=483;FS=10.305;HRun=0;HaplotypeScore=68.3475;InbreedingCoeff=0.3151;MQ=57.66;MQ0=32;MQRankSum=0.058;QD=11.53;ReadPosRankSum=-0.722;VQSLOD=3.3654;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:27:53.92:444,54,0	1/1:4,0:4:5.87:35,6,0	0/1:34,0:9:4.01:4,0,71	0/1:40,0:11:22.04:22,0,88	1/1:14,0:14:2.92:17,3,0	1/1:14,0:13:24.86:240,25,0	1/1:19,0:17:41.81:331,42,0	1/1:13,0:12:35.83:292,36,0	1/1:15,0:15:44.54:322,45,0	1/1:17,0:17:45.60:398,46,0	1/1:13,0:13:26.97:223,27,0	1/1:18,0:18:5.94:42,6,0	1/1:18,0:18:44.46:343,44,0	1/1:14,0:14:26.94:218,27,0	1/1:15,0:15:23.94:198,24,0	1/1:25,0:25:8.70:50,9,0	0/0:30,0:30:33.68:0,34,252	0/1:18,0:18:99:143,0,117	1/1:4,0:4:11.85:90,12,0	1/1:11,0:11:23.97:199,24,0	1/1:19,0:17:29.92:245,30,0	1/1:14,0:13:23.97:200,24,0	1/1:12,0:12:29.96:247,30,0	1/1:24,0:22:38.81:305,39,0	1/1:13,0:12:23.98:204,24,0	1/1:8,10:18:38.87:314,39,0	1/1:14,0:14:8.54:48,9,0	1/1:2,0:2:5.99:49,6,0
chr10	29391997	.	TCACA	T	115.90	PASS	AB=0.759;AC=3;AF=0.071;AN=42;BaseQRankSum=-0.633;DP=511;FS=2.146;HRun=0;HaplotypeScore=112.6682;InbreedingCoeff=0.1914;MQ=63.61;MQ0=16;MQRankSum=1.048;QD=2.32;ReadPosRankSum=1.025;VQSLOD=2.3291;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:28:8.95:83,9,0	0/0:10,0:10:12.04:0,12,187	./.	./.	0/0:13,0:15:2.74:0,3,12	0/0:15,0:13:6.02:0,6,104	0/0:22,0:21:17.53:0,18,276	./.	./.	0/0:22,0:21:3:0,3,29	0/0:12,0:11:8.99:0,9,89	0/0:18,0:17:15.05:0,15,292	0/0:15,0:14:3.01:0,3,62	./.	0/0:22,0:23:14.79:0,15,264	0/0:24,0:27:23.52:0,24,342	0/0:21,0:21:2.84:0,3,10	./.	0/0:22,0:22:5.81:0,6,56	0/0:20,0:20:8.93:0,9,106	0/0:18,0:18:12.04:0,12,197	0/0:14,0:13:2.84:0,3,14	./.	0/1:15,7:22:40.45:125,0,40	0/0:11,0:11:6.02:0,6,120	0/0:14,0:14:6.90:0,7,69	0/0:11,0:11:9.03:0,9,148	0/0:6,0:5:3.01:0,3,42
chr10	29392177	.	C	CTT	13915.25	PASS	AB=0.804;AC=44;AF=0.786;AN=56;BaseQRankSum=-9.575;DP=672;FS=1.674;HRun=1;HaplotypeScore=83.3902;InbreedingCoeff=0.7728;MQ=63.89;MQ0=14;MQRankSum=5.670;QD=26.06;ReadPosRankSum=4.923;VQSLOD=3.9602;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:37.60:0,38,316	1/1:0,9:9:17.73:299,18,0	0/0:29,0:15:25.95:0,26,227	0/0:54,0:23:33.81:0,34,335	1/1:1,26:27:65.45:810,65,0	1/1:0,15:15:15.05:289,15,0	1/1:4,24:27:20.82:525,21,0	1/1:5,27:31:46.56:723,47,0	1/1:0,17:17:30.03:537,30,0	1/1:2,26:26:67.17:895,67,0	1/1:3,18:20:36.55:648,37,0	1/1:4,18:21:1.30:323,1,0	1/1:3,20:22:30.10:577,30,0	1/1:2,17:19:14.58:388,15,0	1/1:2,32:34:35.80:907,36,0	1/1:5,21:26:8.54:494,9,0	0/0:7,0:7:13.68:0,14,88	0/0:17,0:17:25.28:0,25,191	0/1:6,11:17:0.67:301,0,1	1/1:0,30:31:89.59:1142,90,0	1/1:2,26:28:15.12:559,15,0	1/1:3,18:21:24.09:453,24,0	1/1:1,18:19:21.05:404,21,0	1/1:3,30:33:41.89:915,42,0	1/1:2,19:21:20.12:672,20,0	1/1:0,31:31:93.06:1356,93,0	1/1:2,21:22:11.60:604,12,0	0/1:9,0:7:6.23:94,0,6
chr10	29395762	.	TCCATCAA	T	25255.62	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=2.656;DP=672;FS=1.339;HRun=0;HaplotypeScore=174.4196;InbreedingCoeff=0.9014;MQ=77.24;MQ0=0;MQRankSum=-8.934;QD=41.88;ReadPosRankSum=8.434;VQSLOD=4.3478;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,20:23:39.13:905,39,0	1/1:1,15:16:39.13:913,39,0	0/0:36,0:37:72.19:0,72,2190	0/0:31,0:29:23.31:0,23,1311	1/1:6,28:35:63.15:1333,63,0	1/1:2,18:20:45.15:1066,45,0	1/1:2,17:19:36.12:836,36,0	1/1:9,24:33:72.05:1249,72,0	1/1:6,21:27:60.21:1416,60,0	1/1:6,23:29:66.23:1542,66,0	1/1:3,9:12:24.08:515,24,0	1/1:3,20:23:42.14:995,42,0	1/1:7,26:33:75.26:1777,75,0	1/1:2,18:20:45.15:1066,45,0	1/1:4,26:30:57.20:1350,57,0	1/1:1,16:17:36.12:853,36,0	1/1:5,18:23:36.12:841,36,0	1/1:3,10:13:18.06:427,18,0	1/1:9,13:22:33.07:595,33,0	1/1:3,18:21:45.15:983,45,0	1/1:12,20:33:14.76:415,15,0	1/1:5,23:29:54.01:1147,54,0	1/1:2,26:28:60.20:1329,60,0	1/1:4,13:17:21.07:497,21,0	1/1:4,19:23:42.14:978,42,0	1/1:7,17:24:48.13:1021,48,0	1/1:5,27:32:48.16:1137,48,0	1/1:0,1:1:3.01:71,3,0
chr10	29396292	.	C	CCAGAGATTGATGACT	84357.30	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-10.115;DP=650;FS=2.611;HRun=0;HaplotypeScore=231.7226;InbreedingCoeff=0.9980;MQ=65.52;MQ0=1;MQRankSum=-14.179;QD=149.84;ReadPosRankSum=1.906;VQSLOD=5.0873;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:18,10:29:69.23:4180,69,0	1/1:3,7:12:30.10:2047,30,0	0/0:27,0:25:72.23:0,72,2517	0/0:13,0:13:35.33:0,35,1348	1/1:17,7:27:54.18:2163,54,0	1/1:10,9:20:57.19:3436,57,0	1/1:14,6:20:54.18:3314,54,0	1/1:39,0:39:99:6267,105,0	1/1:10,9:22:51.17:2820,51,0	1/1:21,9:31:87.30:5530,87,0	1/1:5,4:10:27.09:1334,27,0	1/1:17,17:35:96.33:6274,96,0	1/1:7,10:26:57.19:3851,57,0	1/1:12,18:32:87.30:5659,87,0	1/1:17,15:34:87.30:5428,87,0	1/1:13,13:29:72.25:4492,72,0	0/0:37,0:37:99:0,108,4213	0/0:10,0:10:30.08:0,30,1035	1/1:14,3:18:45.13:2549,45,0	1/1:19,7:31:63.21:3515,63,0	1/1:12,2:17:33.11:1654,33,0	1/1:10,7:19:45.15:2378,45,0	1/1:9,5:15:32.47:2031,32,0	1/1:10,5:20:33.11:2004,33,0	1/1:13,6:20:57.19:3522,57,0	1/1:11,8:23:66.23:3906,66,0	1/1:12,13:26:69.23:4440,69,0	1/1:4,3:7:21.07:1563,21,0
chr10	29398190	.	CT	C	10847.70	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-2.699;DP=622;FS=19.077;HRun=11;HaplotypeScore=109.7124;InbreedingCoeff=0.9600;MQ=67.67;MQ0=0;MQRankSum=-4.873;QD=18.67;ReadPosRankSum=5.152;VQSLOD=4.2298;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,20:24:50.93:417,51,0	1/1:1,8:9:20.88:164,21,0	0/0:20,0:16:35.18:0,35,297	0/0:21,0:16:30.28:0,30,248	1/1:3,23:26:30.87:455,31,0	1/1:2,27:29:68.91:567,69,0	1/1:8,15:23:47.77:394,48,0	1/1:8,18:26:53.87:437,54,0	1/1:3,12:15:35.95:296,36,0	1/1:6,26:33:51.08:603,51,0	1/1:5,24:29:62.53:517,63,0	1/1:1,20:21:56.93:468,57,0	1/1:6,24:30:62.92:517,63,0	1/1:2,16:19:16.20:330,16,0	1/1:1,18:19:53.94:443,54,0	1/1:0,24:24:65.92:542,66,0	1/1:3,18:21:38.95:320,39,0	1/1:3,17:20:41.88:339,42,0	1/1:3,14:17:44.89:362,45,0	1/1:5,24:30:65.71:524,66,0	1/1:4,4:8:11.97:98,12,0	1/1:4,22:26:59.90:491,60,0	1/1:4,19:23:47.92:394,48,0	1/1:3,13:16:38.94:320,39,0	1/1:2,31:34:79.94:646,80,0	1/1:2,21:24:65.85:532,66,0	1/1:2,27:30:70.95:572,71,0	1/1:1,4:5:11.98:99,12,0
chr10	29400098	.	G	GC	501.32	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-3.159;DP=469;FS=0.844;HRun=8;HaplotypeScore=54.4892;InbreedingCoeff=0.9434;MQ=80.66;MQ0=0;MQRankSum=-0.341;QD=20.89;ReadPosRankSum=-0.953;VQSLOD=3.3101;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,19:24:29.71:596,30,0	0/0:10,0:10:27.01:0,27,247	0/0:15,0:15:18.43:0,18,281	0/0:17,0:17:29.48:0,29,246	0/0:8,0:8:12:0,12,110	0/0:9,0:9:27.01:0,27,246	0/0:21,0:22:56.07:0,56,500	0/0:27,0:27:51.01:0,51,467	0/0:20,0:20:51:0,51,462	0/0:17,0:17:51.03:0,51,467	0/0:10,0:10:24:0,24,216	0/0:18,0:18:51.02:0,51,467	0/0:15,0:15:42.01:0,42,380	0/0:21,0:21:59.28:0,59,538	0/0:16,0:16:38.98:0,39,357	0/0:13,0:13:36.02:0,36,329	0/0:22,0:22:37.39:0,37,473	0/0:12,0:12:30.01:0,30,275	0/0:15,0:15:39.02:0,39,357	0/0:25,0:25:66.03:0,66,603	0/0:28,0:28:66.01:0,66,604	0/0:15,0:15:39.01:0,39,357	0/0:12,0:12:36.02:0,36,329	0/0:31,0:31:74.96:0,75,672	0/0:13,0:13:29.99:0,30,270	0/0:19,0:19:51.01:0,51,461	0/0:6,1:7:16.82:0,17,142	0/0:7,0:7:21.01:0,21,192
chr10	29400862	.	G	GA	12190.77	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-12.105;DP=678;FS=9.217;HRun=10;HaplotypeScore=81.7980;InbreedingCoeff=0.9462;MQ=74.54;MQ0=0;MQRankSum=-3.058;QD=22.08;ReadPosRankSum=-0.003;VQSLOD=5.1926;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,1:31:53.95:0,54,639	1/1:5,7:13:20.89:206,21,0	0/0:22,1:21:9.21:0,9,201	0/0:15,0:15:22.37:0,22,187	1/1:3,28:31:87.12:896,87,0	1/1:4,19:23:57.14:606,57,0	1/1:4,22:26:57.06:593,57,0	1/1:7,17:24:51.57:514,52,0	1/1:5,18:23:45.11:480,45,0	1/1:8,14:23:44.91:451,45,0	1/1:7,19:26:32.48:543,32,0	1/1:2,16:18:33.08:352,33,0	1/1:2,17:19:51.13:544,51,0	1/1:2,20:22:23.44:442,23,0	1/1:5,21:27:38.34:568,38,0	1/1:7,21:28:35.51:583,36,0	0/0:3,0:25:42.77:0,43,124	0/0:5,0:30:36.95:0,37,140	1/1:9,14:24:44.92:453,45,0	1/1:7,26:35:56.23:740,56,0	1/1:6,8:15:23.89:238,24,0	1/1:2,20:22:57.14:608,57,0	1/1:1,20:21:36.09:384,36,0	1/1:2,15:16:14.45:359,14,0	1/1:3,19:23:59.97:614,60,0	1/1:6,33:39:99:1034,99,0	1/1:10,24:35:7.26:688,7,0	1/1:7,11:18:8.44:295,8,0
chr10	29402870	.	A	ACCACACG	1135.30	PASS	AB=0.913;AC=20;AF=0.357;AN=56;BaseQRankSum=-1.386;DP=787;FS=0.895;HRun=0;HaplotypeScore=227.9459;InbreedingCoeff=-0.3455;MQ=48.31;MQ0=12;MQRankSum=2.469;QD=2.51;ReadPosRankSum=-4.419;VQSLOD=1.8930;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:51:42.22:0,42,216	0/1:15,0:15:26.51:27,0,222	0/0:31,0:12:36.08:0,36,566	0/0:43,0:13:30.05:0,30,488	0/0:4,0:21:10.70:0,11,44	0/1:27,0:25:65.18:65,0,162	0/1:42,0:41:84.13:84,0,313	0/0:38,0:35:11.92:0,12,556	1/1:1,0:21:5.88:76,6,0	0/1:10,1:27:99:165,0,376	0/1:18,0:18:46.98:47,0,63	0/1:34,0:33:13.73:14,0,251	0/1:27,0:27:99:130,0,242	0/0:17,0:17:4.65:0,5,220	1/1:6,0:29:3.85:102,4,0	0/0:21,0:21:1.50:0,2,158	0/0:54,0:54:99:0,105,1574	0/0:29,0:29:3.41:0,3,731	0/1:2,0:22:99:112,0,171	0/1:18,0:18:8.74:9,0,56	0/1:43,0:42:99:135,0,372	0/1:2,0:27:20.34:90,0,20	0/1:23,0:21:70.81:71,0,139	0/1:39,0:38:25.72:26,0,161	0/1:13,0:12:57.54:58,0,61	0/0:29,0:28:13.53:0,14,469	0/1:21,0:22:45.54:46,0,316	0/1:4,0:4:40.48:40,0,46
chr10	29403077	.	TGGG	T	16674.93	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-8.735;DP=627;FS=9.092;HRun=11;HaplotypeScore=105.1122;InbreedingCoeff=0.9705;MQ=74.17;MQ0=0;MQRankSum=-5.674;QD=30.88;ReadPosRankSum=3.961;VQSLOD=3.5705;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:15:5.97:0,6,65	1/1:0,19:19:51.16:670,51,0	0/0:20,0:19:42.29:0,42,421	0/0:11,1:13:15.24:0,15,209	1/1:2,34:36:99:1298,99,0	1/1:3,30:33:75.23:984,75,0	1/1:2,9:11:27.08:354,27,0	1/1:2,24:26:69.18:890,69,0	1/1:2,17:19:39.12:511,39,0	1/1:6,13:19:42.12:550,42,0	1/1:3,25:28:69.21:901,69,0	1/1:2,28:30:75.24:985,75,0	1/1:3,22:25:57.17:749,57,0	1/1:4,20:24:54.16:709,54,0	1/1:2,25:27:51.16:669,51,0	1/1:2,26:28:63.19:828,63,0	0/0:12,0:21:44.88:0,45,362	0/0:4,0:15:34.13:0,34,260	1/1:4,15:19:45.06:554,45,0	1/1:4,13:17:36.09:468,36,0	1/1:4,17:21:48.15:617,48,0	1/1:4,22:26:63.19:817,63,0	1/1:3,21:24:57.18:742,57,0	1/1:2,24:26:63.20:823,63,0	1/1:4,19:24:57.07:710,57,0	1/1:5,18:23:54.16:706,54,0	1/1:1,25:26:63.16:824,63,0	1/1:0,9:9:24.08:315,24,0
chr10	29403086	.	GGGT	G	7077.37	PASS	AB=0.989;AC=40;AF=0.714;AN=56;BaseQRankSum=7.302;DP=626;FS=32.122;HRun=0;HaplotypeScore=137.0463;InbreedingCoeff=0.4197;MQ=79.14;MQ0=0;MQRankSum=-6.759;QD=13.18;ReadPosRankSum=11.569;VQSLOD=2.2666;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:12.01:0,12,141	1/1:19,0:19:48.73:271,49,0	0/0:26,0:22:56.91:0,57,580	0/0:19,0:19:18.35:0,18,317	1/1:36,1:37:48:619,48,0	1/1:33,1:34:7.96:391,8,0	0/1:13,1:14:60.94:161,0,61	0/1:32,0:32:99:274,0,133	1/1:18,1:19:15.89:236,16,0	1/1:16,2:18:5.05:227,5,0	1/1:29,0:29:3.52:384,4,0	1/1:30,0:30:28.22:378,28,0	1/1:25,0:25:3.71:292,4,0	1/1:21,0:21:30.49:300,30,0	1/1:25,0:25:49.42:324,49,0	1/1:27,0:27:38.91:331,39,0	0/0:19,0:19:46.52:0,47,434	0/0:13,0:13:38.61:0,39,353	0/1:17,0:17:12.83:165,0,13	0/1:15,0:15:1.89:192,0,2	1/1:19,1:20:2.67:265,3,0	1/1:22,1:23:61.69:422,62,0	1/1:24,1:25:13.02:354,13,0	1/1:26,0:26:44.33:367,44,0	1/1:20,1:20:53.53:340,54,0	0/1:23,0:23:34.61:325,0,35	0/1:28,0:28:4.61:325,0,5	1/1:9,0:9:23.18:132,23,0
chr10	29404993	.	T	TCACACACACACACACACACA	10614.26	PASS	AB=0.951;AC=49;AF=0.875;AN=56;BaseQRankSum=-4.970;DP=598;FS=1.322;HRun=0;HaplotypeScore=260.5536;InbreedingCoeff=0.0762;MQ=55.46;MQ0=4;MQRankSum=-5.417;QD=18.33;ReadPosRankSum=-1.809;VQSLOD=3.1379;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:34:99:156,0,623	1/1:6,0:6:12.03:632,12,0	0/1:24,0:12:4.94:5,0,199	0/1:31,0:16:28.15:36,0,28	1/1:27,0:27:17.32:254,17,0	1/1:22,0:20:8.99:245,9,0	1/1:22,0:22:21.04:792,21,0	1/1:18,0:18:39.11:822,39,0	0/0:4,0:19:12.32:0,12,1338	1/1:31,0:31:53.58:1114,54,0	1/1:5,12:22:3.01:279,3,0	1/1:20,0:18:24.08:960,24,0	1/1:14,0:12:0.16:127,0,0	1/1:17,0:16:15.03:479,15,0	1/1:7,12:24:2.91:279,3,0	1/1:4,16:26:3.01:280,3,0	0/1:19,0:19:7.34:7,0,1159	0/1:21,0:21:96.48:96,0,1252	1/1:31,0:30:53.87:1049,54,0	1/1:17,0:17:3.01:46,3,0	1/1:18,0:18:6.02:77,6,0	1/1:19,0:17:15.02:486,15,0	1/1:22,0:20:6.01:74,6,0	1/1:3,14:20:2.95:280,3,0	1/1:4,9:20:3.01:280,3,0	1/1:25,0:24:47.78:733,48,0	1/1:3,7:14:7.55:467,8,0	1/1:14,0:14:20.93:559,21,0
chr10	29406267	.	TCA	T	22050.08	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=14.529;DP=748;FS=1.425;HRun=0;HaplotypeScore=112.3835;InbreedingCoeff=0.9996;MQ=83.52;MQ0=6;MQRankSum=-3.562;QD=38.89;ReadPosRankSum=2.188;VQSLOD=6.6464;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,132,2413	1/1:1,10:11:26.96:397,27,0	0/0:22,0:22:53.88:0,54,933	0/0:23,0:22:51.12:0,51,813	1/1:0,25:25:66.22:971,66,0	1/1:0,41:41:99:1634,111,0	1/1:0,19:19:57.19:839,57,0	1/1:0,24:24:72.23:1040,72,0	0/0:35,0:35:99:0,105,1918	1/1:1,29:30:90.29:1302,90,0	1/1:2,24:26:66.22:971,66,0	1/1:1,21:22:60.20:883,60,0	1/1:0,20:20:57.19:839,57,0	1/1:0,21:21:57.19:839,57,0	1/1:1,40:41:99:1634,111,0	1/1:1,28:29:28.09:1136,28,0	0/0:28,0:28:78.27:0,78,1460	0/0:26,0:26:75.16:0,75,1331	1/1:0,20:20:60.18:860,60,0	1/1:0,26:25:69.23:1016,69,0	1/1:0,20:20:57.19:839,57,0	1/1:0,30:30:81.27:1193,81,0	1/1:0,30:30:78.26:1148,78,0	1/1:0,25:25:63.21:927,63,0	1/1:2,22:24:57.19:839,57,0	1/1:0,28:28:84.25:1196,84,0	1/1:0,29:29:63.21:927,63,0	1/1:2,24:21:42.14:618,42,0
chr10	29407345	.	A	AACACACACACAC	7292.94	PASS	AB=0.694;AC=39;AF=0.750;AN=52;BaseQRankSum=-9.115;DP=640;FS=8.480;HRun=0;HaplotypeScore=238.1776;InbreedingCoeff=0.4795;MQ=50.02;MQ0=5;MQRankSum=0.128;QD=16.03;ReadPosRankSum=0.774;VQSLOD=2.5494;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:43:8.72:0,9,23	1/1:8,0:8:2.53:164,3,0	./.	./.	1/1:21,1:22:2.83:49,3,0	1/1:22,0:22:11.25:514,11,0	1/1:27,0:25:15.95:213,16,0	1/1:26,0:26:36.06:905,36,0	0/0:12,0:26:10.75:0,11,40	1/1:27,0:26:17.51:438,18,0	1/1:22,0:22:1.55:86,2,0	1/1:23,0:23:8.22:297,8,0	1/1:9,3:18:3.03:169,3,0	1/1:9,1:22:1.61:110,2,0	1/1:23,2:24:23.19:737,23,0	1/1:19,0:19:9.03:321,9,0	0/0:13,0:32:27.06:0,27,530	0/0:7,0:16:18.06:0,18,396	1/1:22,0:22:25.33:1009,25,0	0/1:15,1:28:2.09:73,0,2	1/1:23,0:23:14.63:186,15,0	0/0:19,4:29:2.91:0,3,6	1/1:20,0:26:0.89:113,1,0	0/1:16,2:29:10.33:114,0,10	0/1:13,5:22:0.15:121,0,0	1/1:18,0:18:15.02:378,15,0	1/1:18,0:18:25.58:968,26,0	1/1:6,0:6:12.04:327,12,0
chr10	29407935	.	C	CA	24206.54	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-17.177;DP=804;FS=0.990;HRun=2;HaplotypeScore=71.6856;InbreedingCoeff=0.9998;MQ=86.18;MQ0=0;MQRankSum=-4.769;QD=39.36;ReadPosRankSum=1.260;VQSLOD=5.2722;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,147,1822	1/1:0,15:15:45.15:648,45,0	0/0:26,0:26:39.45:0,39,648	0/0:25,0:26:57.39:0,57,790	1/1:0,20:20:57.19:821,57,0	1/1:0,25:25:69.22:976,69,0	1/1:0,27:27:78.26:1123,78,0	1/1:1,31:32:90.29:1278,90,0	0/0:25,0:25:69.18:0,69,828	1/1:1,27:27:78.21:1069,78,0	1/1:3,16:19:51.17:727,51,0	1/1:1,29:30:84.28:1210,84,0	1/1:0,22:22:60.20:864,60,0	1/1:1,26:27:78.26:1109,78,0	1/1:1,45:45:99:1878,132,0	1/1:0,33:33:96.32:1382,96,0	0/0:33,0:33:99:0,99,1227	0/0:30,0:30:90.28:0,90,1114	1/1:3,28:31:81.73:1142,82,0	1/1:5,29:34:84.28:1209,84,0	1/1:3,35:38:96.32:1382,96,0	1/1:1,25:26:72.24:1037,72,0	1/1:1,27:28:78.26:1123,78,0	1/1:3,40:43:99:1555,108,0	1/1:0,28:28:84.28:1209,84,0	1/1:1,25:26:72.24:1037,72,0	1/1:2,24:25:72.24:1037,72,0	1/1:0,11:11:27.09:389,27,0
chr10	29408091	.	C	CT	22866.03	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=12.621;DP=722;FS=2.742;HRun=0;HaplotypeScore=112.9878;InbreedingCoeff=0.9995;MQ=83.42;MQ0=1;MQRankSum=-4.273;QD=41.80;ReadPosRankSum=-1.650;VQSLOD=4.0898;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,138,1920	1/1:0,9:9:27.09:405,27,0	0/0:17,0:17:48.05:0,48,610	0/0:23,0:23:56.84:0,57,753	1/1:1,21:22:57.05:756,57,0	1/1:1,22:23:66.22:995,66,0	1/1:0,34:34:96.33:1444,96,0	1/1:0,32:31:93.12:1325,93,0	0/0:28,0:28:81.27:0,81,1129	1/1:0,29:29:87.22:1210,87,0	1/1:0,9:9:27.09:398,27,0	1/1:1,24:25:60.20:900,60,0	1/1:2,27:29:75.25:1121,75,0	1/1:0,24:24:69.23:1027,69,0	1/1:0,35:35:93.32:1408,93,0	1/1:0,26:26:78.26:1166,78,0	0/0:35,0:35:99:0,102,1425	0/0:23,0:22:69.23:0,69,964	1/1:1,20:21:63.16:859,63,0	1/1:2,15:17:48.15:695,48,0	1/1:1,50:50:99:2193,147,0	1/1:0,29:29:78.26:1181,78,0	1/1:0,21:21:60.20:903,60,0	1/1:0,30:30:90.30:1345,90,0	1/1:0,23:23:69.23:1030,69,0	1/1:0,26:26:78.25:1149,78,0	1/1:1,21:22:60.20:899,60,0	1/1:0,10:10:30.10:456,30,0
chr10	29409509	.	CA	C	7322.91	PASS	AB=0.712;AC=43;AF=0.768;AN=56;BaseQRankSum=-4.306;DP=510;FS=0.483;HRun=11;HaplotypeScore=61.1762;InbreedingCoeff=0.7106;MQ=77.01;MQ0=1;MQRankSum=1.368;QD=17.52;ReadPosRankSum=1.314;VQSLOD=5.8381;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:51.10:0,51,528	1/1:1,12:13:32.96:271,33,0	0/1:15,0:13:4.53:5,0,43	0/0:13,0:15:6.25:0,6,65	1/1:3,22:25:27.94:436,28,0	1/1:2,21:23:53.93:443,54,0	0/1:6,14:21:12.16:257,0,12	1/1:3,20:23:56.91:468,57,0	0/0:6,0:16:25.86:0,26,150	1/1:2,21:23:59.88:486,60,0	0/1:4,7:11:8.02:148,0,8	1/1:3,15:18:41.91:345,42,0	1/1:3,16:19:41.57:344,42,0	1/1:4,21:25:30.93:461,31,0	1/1:1,18:19:50.94:419,51,0	1/1:1,16:17:32.96:271,33,0	0/0:6,1:18:10.02:0,10,161	0/0:0,0:22:54.04:0,54,271	1/1:2,11:13:32.90:262,33,0	1/1:7,14:21:35.90:295,36,0	1/1:4,6:9:17.97:148,18,0	1/1:5,15:20:44.93:369,45,0	1/1:4,12:16:32.94:271,33,0	1/1:1,12:13:35.96:296,36,0	1/1:2,14:17:34.99:277,35,0	1/1:4,16:22:48.99:381,49,0	1/1:1,24:26:61.97:498,62,0	1/1:0,7:7:20.98:172,21,0
chr10	29410156	.	G	GGAGAGAGAGAGA	9971.96	PASS	AC=54;AF=0.964;AN=56;BaseQRankSum=-2.032;DP=801;FS=0.000;HRun=0;HaplotypeScore=261.5591;InbreedingCoeff=0.3945;MQ=60.28;MQ0=19;MQRankSum=1.170;QD=14.03;ReadPosRankSum=0.970;VQSLOD=3.4471;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:19,7:32:9.03:252,9,0	1/1:8,0:9:12.04:224,12,0	1/1:65,0:26:0.47:1,0,0	0/0:90,0:36:5.82:0,6,67	1/1:9,0:18:6.02:89,6,0	1/1:13,0:24:9.03:221,9,0	1/1:21,0:35:15.87:376,16,0	1/1:33,0:33:33.99:681,34,0	1/1:22,0:23:12.04:319,12,0	1/1:38,0:38:51.13:895,51,0	1/1:20,0:22:6.02:102,6,0	1/1:15,0:22:12.04:284,12,0	1/1:21,0:31:9.03:275,9,0	1/1:13,0:26:21.54:410,22,0	1/1:17,0:34:21.54:465,22,0	1/1:21,0:33:25.33:594,25,0	1/1:20,0:20:6.48:183,6,0	1/1:9,2:14:12.04:520,12,0	1/1:16,0:16:15.02:302,15,0	1/1:12,0:18:12.93:241,13,0	1/1:21,0:20:2.72:26,3,0	1/1:15,0:26:15.05:329,15,0	1/1:18,0:18:15.05:336,15,0	1/1:14,0:23:0.54:266,1,0	1/1:11,0:27:15.96:388,16,0	1/1:16,0:31:57.16:1100,57,0	1/1:14,0:27:27.09:572,27,0	1/1:22,0:24:30.07:520,30,0
chr10	29411941	.	C	CTGTT	27035.26	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=13.941;DP=540;FS=5.509;HRun=0;HaplotypeScore=130.7789;InbreedingCoeff=0.9860;MQ=72.16;MQ0=0;MQRankSum=-16.613;QD=72.68;ReadPosRankSum=0.218;VQSLOD=6.8208;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,126,2498	1/1:0,4:4:9.03:259,9,0	0/0:18,0:18:53.74:0,54,946	0/0:24,0:24:62.77:0,63,1046	1/1:0,21:24:60.13:1559,60,0	1/1:0,26:26:72.25:2076,72,0	1/1:2,18:20:51.17:1450,51,0	1/1:1,20:21:60.18:1517,60,0	0/0:24,0:24:69.21:0,69,1371	1/1:0,20:20:57.20:1646,57,0	1/1:0,9:9:24.08:638,24,0	1/1:0,15:15:42.14:1207,42,0	1/1:1,12:14:32.76:938,33,0	1/1:0,17:20:45.15:1296,45,0	1/1:0,26:26:75.26:2161,75,0	1/1:0,11:12:33.11:951,33,0	0/0:40,0:40:99:0,120,2387	0/0:20,0:20:60.19:0,60,1218	1/1:0,13:13:39.13:1042,39,0	1/1:1,13:17:48.04:1231,48,0	1/1:0,12:15:29.70:796,30,0	1/1:0,15:16:39.13:1123,39,0	1/1:1,12:15:33.11:943,33,0	1/1:1,16:17:38.64:1087,39,0	1/1:0,15:16:42.14:1210,42,0	1/1:0,19:21:63.18:1654,63,0	1/1:0,22:22:60.21:1731,60,0	1/1:0,9:9:18.06:520,18,0
chr10	29412280	.	CTGTGTGTGTGTG	C	17678.21	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=3.702;DP=750;FS=2.834;HRun=0;HaplotypeScore=249.7803;InbreedingCoeff=0.8203;MQ=56.47;MQ0=8;MQRankSum=-8.758;QD=31.07;ReadPosRankSum=0.380;VQSLOD=3.8221;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:26.59:0,27,1024	1/1:1,10:11:15.05:498,15,0	0/0:28,0:18:3.01:0,3,74	0/0:26,0:10:8.99:0,9,365	1/1:9,21:32:14.70:458,15,0	1/1:6,12:19:15.05:528,15,0	1/1:11,19:31:27.09:907,27,0	1/1:13,8:20:23.88:353,24,0	0/0:29,0:28:11.66:0,12,484	1/1:14,19:33:44.95:1041,45,0	1/1:4,9:14:18.06:609,18,0	1/1:3,29:33:57.19:1840,57,0	1/1:11,19:30:45.15:1465,45,0	1/1:11,29:40:45.11:1429,45,0	1/1:17,28:47:66.22:2181,66,0	1/1:11,23:37:61.15:1988,61,0	0/0:10,0:35:63.22:0,63,2372	0/0:3,0:18:36.12:0,36,1351	1/1:7,7:14:20.91:288,21,0	1/1:8,6:14:6.02:76,6,0	1/1:32,19:52:2.60:83,3,0	1/1:3,15:19:12.04:399,12,0	1/1:5,13:18:9:317,9,0	1/1:11,12:25:7.58:215,8,0	1/1:9,7:16:12.04:422,12,0	1/1:8,24:32:68.59:1422,69,0	1/1:10,14:24:27.09:950,27,0	1/1:5,2:7:6.02:211,6,0
chr10	29412831	.	TTGTG	T	5013.12	PASS	AB=0.945;AC=42;AF=0.750;AN=56;BaseQRankSum=-3.218;DP=661;FS=10.289;HRun=0;HaplotypeScore=149.4871;InbreedingCoeff=0.3345;MQ=64.57;MQ0=13;MQRankSum=3.302;QD=9.70;ReadPosRankSum=5.043;VQSLOD=3.4545;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:15.05:0,15,267	1/1:3,0:3:6.01:74,6,0	0/0:58,0:34:23.28:0,23,325	0/0:48,0:24:16.87:0,17,285	1/1:17,1:18:9:94,9,0	1/1:21,3:23:23.55:292,24,0	1/1:17,1:17:15.31:172,15,0	1/1:25,14:39:39.43:423,39,0	1/1:16,2:21:21.07:294,21,0	1/1:21,2:22:24.35:356,24,0	1/1:9,1:11:6.01:71,6,0	0/1:28,1:31:7.04:325,0,7	1/1:23,3:26:7.78:378,8,0	1/1:17,2:19:6.01:73,6,0	1/1:21,2:22:3.41:402,3,0	1/1:28,5:33:12.36:349,12,0	0/1:32,0:32:15.01:232,0,15	0/1:20,0:20:99:116,0,100	1/1:19,1:19:9.90:111,10,0	1/1:18,1:19:15.03:192,15,0	0/1:19,1:19:14.56:82,0,15	1/1:23,1:24:2.74:46,3,0	1/1:19,3:21:17.98:185,18,0	0/1:15,2:17:2.23:106,0,2	0/0:6,8:14:5.53:0,6,37	1/1:20,0:19:11.97:117,12,0	0/1:19,2:20:2.44:296,0,2	1/1:13,0:13:10.77:230,11,0
chr10	29412856	.	T	TGA	151.38	PASS	AB=0.993;AC=9;AF=0.161;AN=56;BaseQRankSum=7.597;DP=582;FS=14.256;HRun=0;HaplotypeScore=148.5099;InbreedingCoeff=0.0384;MQ=45.86;MQ0=14;MQRankSum=-4.229;QD=0.95;ReadPosRankSum=0.029;VQSLOD=2.1000;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:27:1.28:1,0,19	0/0:6,0:6:8.86:0,9,89	0/0:22,0:9:23.92:0,24,270	0/0:22,0:7:21.01:0,21,230	0/0:21,0:20:11.98:0,12,106	0/0:22,0:21:24.89:0,25,252	0/0:14,0:11:20.93:0,21,171	0/0:43,0:42:99:0,114,887	1/1:9,5:14:8.42:114,8,0	0/0:20,0:19:22.18:0,22,365	0/1:14,0:14:1.10:1,0,55	0/0:33,0:33:20.48:0,20,246	0/1:19,1:20:2.45:2,0,214	0/0:23,0:22:5.04:0,5,35	0/0:23,0:22:32.97:0,33,332	0/0:31,0:31:19.35:0,19,259	0/1:29,0:29:10.25:10,0,135	0/1:14,0:14:21.23:63,0,21	0/0:12,0:11:3.08:0,3,160	0/0:17,0:17:8.67:0,9,139	0/0:16,0:15:11.97:0,12,103	0/0:28,0:28:5.84:0,6,49	0/0:25,0:23:17.07:0,17,149	0/0:19,0:19:9.41:0,9,74	0/0:13,0:13:6:0,6,56	0/1:18,0:17:32.67:33,0,207	0/1:22,0:20:49.41:49,0,160	0/0:12,0:12:14.08:0,14,155
chr10	29412858	.	T	TGA	1499.54	PASS	AB=0.952;AC=35;AF=0.625;AN=56;BaseQRankSum=5.309;DP=563;FS=5.122;HRun=0;HaplotypeScore=139.9948;InbreedingCoeff=-0.1370;MQ=45.74;MQ0=11;MQRankSum=0.070;QD=2.96;ReadPosRankSum=0.295;VQSLOD=2.5523;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:27:1.76:2,0,17	0/0:6,0:6:3.82:0,4,17	0/0:16,0:9:23.90:0,24,272	0/0:22,0:7:16.84:0,17,177	1/1:21,0:20:2.08:22,2,0	0/1:17,3:19:19.85:98,0,20	1/1:16,0:13:2.96:104,3,0	0/1:41,0:40:9.97:10,0,366	1/1:14,0:14:5.55:108,6,0	0/1:18,1:18:52.65:104,0,53	1/1:14,0:14:1.54:8,2,0	0/1:29,2:31:12.33:94,0,12	1/1:18,2:20:1.98:134,2,0	1/1:22,0:21:2.95:29,3,0	0/1:23,0:22:14.44:26,0,14	0/1:30,0:30:3.73:111,0,4	0/1:29,0:29:24.15:24,0,81	0/1:14,0:14:18.16:80,0,18	0/1:12,0:11:48.70:49,0,64	1/1:14,2:16:6.24:68,6,0	0/1:16,1:16:13.24:13,0,20	1/1:27,0:27:2.70:20,3,0	1/1:23,1:22:8.65:64,9,0	1/1:18,0:18:3.66:43,4,0	0/0:12,1:13:6.01:0,6,62	0/1:17,0:16:5.25:51,0,5	1/1:20,2:20:2.42:182,2,0	0/1:5,5:10:8.80:209,0,9
chr10	29412860	.	T	TGA	2484.08	PASS	AB=0.992;AC=40;AF=0.714;AN=56;BaseQRankSum=4.614;DP=551;FS=6.517;HRun=0;HaplotypeScore=138.1855;InbreedingCoeff=0.1187;MQ=45.64;MQ0=11;MQRankSum=0.708;QD=5.05;ReadPosRankSum=2.969;VQSLOD=2.3834;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:27:1.85:2,0,17	0/0:6,0:6:3.49:0,3,16	0/0:13,0:8:20.53:0,21,212	0/0:20,0:6:15.91:0,16,181	0/0:20,0:19:0.83:0,1,2	1/1:20,0:19:9.63:113,10,0	1/1:14,0:11:3.61:87,4,0	0/1:42,0:41:6.62:7,0,251	1/1:14,0:14:6.40:107,6,0	0/1:18,0:17:21.89:115,0,22	1/1:14,0:14:1.61:8,2,0	0/1:28,2:30:2.15:73,0,2	1/1:18,0:18:13.09:130,13,0	1/1:22,0:21:2.99:29,3,0	0/1:23,0:22:10.66:25,0,11	1/1:29,0:29:2.69:94,3,0	1/1:7,24:31:35.47:548,35,0	1/1:5,9:14:39.09:560,39,0	0/1:12,0:11:17.50:58,0,18	1/1:16,0:16:3.31:42,3,0	1/1:16,0:15:3.78:41,4,0	1/1:26,0:26:2.70:20,3,0	1/1:24,0:22:1.55:20,2,0	1/1:17,1:18:4.09:67,4,0	1/1:14,0:14:1.86:23,2,0	0/1:16,0:15:2.91:58,0,3	1/1:22,0:20:9.77:194,10,0	0/1:10,0:10:5.10:209,0,5
chr10	29412862	.	T	TGAGAGAGAGA	8217.83	PASS	AB=1.000;AC=53;AF=0.981;AN=54;BaseQRankSum=-2.221;DP=604;FS=0.000;HRun=0;HaplotypeScore=199.4438;InbreedingCoeff=0.1685;MQ=44.46;MQ0=10;MQRankSum=-0.427;QD=14.05;ReadPosRankSum=-0.981;VQSLOD=3.7519;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:27:5:26,5,0	1/1:6,0:6:5.97:49,6,0	0/1:12,0:8:25.73:26,0,37	./.	1/1:20,0:19:1.55:4,2,0	1/1:27,0:26:20.85:263,21,0	1/1:16,0:13:23.08:406,23,0	1/1:62,0:61:99:1887,153,0	1/1:14,0:14:6.24:25,6,0	1/1:17,0:17:32.63:512,33,0	1/1:14,0:14:1.55:4,2,0	1/1:30,0:30:6.30:89,6,0	1/1:18,0:18:14.55:117,15,0	1/1:22,0:21:4.56:37,5,0	1/1:23,0:22:7.38:105,7,0	1/1:29,0:29:21.95:252,22,0	1/1:29,0:29:35.50:195,36,0	1/1:16,0:16:44.15:721,44,0	1/1:10,0:9:20.85:279,21,0	1/1:15,0:15:4.83:44,5,0	1/1:20,0:19:14.96:160,15,0	1/1:26,0:26:0.72:2,1,0	1/1:23,0:21:3.10:8,3,0	1/1:11,0:21:5.99:101,6,0	1/1:17,0:17:5.97:74,6,0	1/1:11,12:28:72.02:1605,72,0	1/1:22,0:20:14.75:395,15,0	1/1:17,0:17:41.42:832,41,0
chr10	29412869	.	G	GAGAGAGAGAGAC	11263.09	PASS	AB=0.738;AC=51;AF=0.911;AN=56;BaseQRankSum=-1.186;DP=695;FS=6.409;HRun=0;HaplotypeScore=226.8609;InbreedingCoeff=0.2443;MQ=45.40;MQ0=10;MQRankSum=-1.882;QD=16.64;ReadPosRankSum=2.621;VQSLOD=2.9777;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:27:2.97:20,3,0	1/1:2,0:8:5.62:63,6,0	0/1:9,0:5:25.73:26,0,31	0/0:18,0:7:5.99:0,6,53	1/1:7,0:26:1.55:4,2,0	1/1:27,0:27:29.75:279,30,0	1/1:20,0:17:35.98:654,36,0	1/1:64,0:63:99:2277,165,0	1/1:24,0:24:32.99:866,33,0	1/1:12,0:25:47.88:818,48,0	1/1:2,4:19:1.55:4,2,0	0/1:11,7:32:9.45:83,0,9	1/1:10,0:20:13.55:72,14,0	1/1:4,0:27:4.50:22,4,0	1/1:7,1:25:6.48:94,6,0	1/1:11,0:29:21.79:202,22,0	1/1:30,0:31:48.89:282,49,0	1/1:17,0:20:48.81:751,49,0	1/1:5,0:16:41.74:894,42,0	0/1:8,6:22:21.99:22,0,41	1/1:22,0:21:21.02:279,21,0	1/1:2,0:32:0.26:1,0,0	1/1:10,9:28:2.89:8,3,0	1/1:19,0:20:11.91:97,12,0	1/1:16,0:16:8.70:124,9,0	1/1:30,0:30:74.99:2039,75,0	1/1:8,0:27:19.99:459,20,0	1/1:19,0:19:47.42:823,47,0
chr10	29414187	.	C	CT	2478.66	PASS	AB=0.929;AC=9;AF=0.161;AN=56;BaseQRankSum=-11.767;DP=653;FS=0.000;HRun=8;HaplotypeScore=98.5756;InbreedingCoeff=0.9135;MQ=86.30;MQ0=0;MQRankSum=-2.605;QD=21.94;ReadPosRankSum=2.480;VQSLOD=3.5340;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,21:24:35.72:665,36,0	0/0:11,0:11:30.01:0,30,274	0/0:33,0:33:64.21:0,64,585	0/0:21,0:20:16.56:0,17,283	0/0:27,0:27:81.01:0,81,731	0/0:34,0:34:90.04:0,90,824	0/0:13,0:13:36.01:0,36,325	0/0:37,0:37:96.03:0,96,872	1/1:3,25:28:69.21:796,69,0	0/0:31,0:31:81.02:0,81,736	0/0:28,0:27:78.03:0,78,709	0/0:12,0:12:35.99:0,36,320	0/0:25,0:25:60.02:0,60,549	0/0:22,0:22:60.02:0,60,544	0/0:24,0:24:63.01:0,63,572	0/0:12,0:12:36:0,36,324	1/1:3,24:27:66.20:762,66,0	1/1:3,18:21:36.11:415,36,0	0/0:33,0:33:84.04:0,84,769	0/0:37,0:37:87.02:0,87,791	0/0:17,0:17:41.97:0,42,374	0/0:21,0:21:54.02:0,54,494	0/0:21,0:21:60.03:0,60,549	0/0:21,0:21:60.03:0,60,549	0/0:18,0:18:51.03:0,51,467	0/1:12,1:13:1.61:2,0,238	0/0:36,0:35:96.03:0,96,874	0/0:6,0:6:18.01:0,18,165
chr10	29414721	.	G	GA	10336	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-1.175;DP=503;FS=17.105;HRun=6;HaplotypeScore=82.5099;InbreedingCoeff=0.9432;MQ=78.29;MQ0=2;MQRankSum=-1.182;QD=29.12;ReadPosRankSum=-0.750;VQSLOD=3.1620;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:72.16:0,72,734	1/1:1,6:7:12.04:151,12,0	0/0:34,0:17:24.17:0,24,270	0/0:38,0:27:2.95:0,3,173	1/1:4,16:20:39.12:491,39,0	1/1:0,13:13:36.12:453,36,0	1/1:1,11:12:27.09:340,27,0	1/1:5,25:30:75.22:927,75,0	0/0:13,0:13:33.07:0,33,337	1/1:2,16:18:48.15:603,48,0	1/1:1,14:15:36.12:453,36,0	1/1:3,13:16:30.10:377,30,0	1/1:0,7:8:21.07:264,21,0	1/1:1,6:7:12.04:151,12,0	1/1:1,14:15:36.12:453,36,0	1/1:3,14:17:36.12:453,36,0	0/0:18,0:18:48.10:0,48,490	0/0:19,0:19:54.04:0,54,524	1/1:4,12:16:39.07:458,39,0	1/1:2,19:21:51.16:641,51,0	1/1:2,14:16:39.12:491,39,0	1/1:1,12:13:30.10:377,30,0	1/1:3,14:17:40.37:493,40,0	1/1:2,15:17:42.13:528,42,0	1/1:3,30:33:55.37:921,55,0	1/1:5,14:19:45.14:556,45,0	1/1:1,19:20:48.15:604,48,0	1/1:0,5:5:12.04:151,12,0
chr10	29414887	.	C	CA	14582.94	PASS	AB=0.567;AC=43;AF=0.768;AN=56;BaseQRankSum=7.404;DP=597;FS=16.109;HRun=6;HaplotypeScore=91.1911;InbreedingCoeff=0.8663;MQ=87.27;MQ0=0;MQRankSum=-4.169;QD=31.36;ReadPosRankSum=1.188;VQSLOD=3.4077;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:62.89:0,63,936	1/1:0,5:5:12.04:151,12,0	0/0:16,0:15:33.58:0,34,293	0/0:24,1:25:4.69:0,5,385	1/1:5,28:33:56.67:1026,57,0	1/1:1,27:28:72.23:906,72,0	1/1:1,13:14:36.12:453,36,0	1/1:4,29:33:84.23:1019,84,0	0/0:19,0:19:48.06:0,48,469	1/1:4,16:20:48.15:604,48,0	1/1:1,19:20:54.13:661,54,0	1/1:1,17:18:42.13:528,42,0	1/1:1,17:18:45.14:566,45,0	1/1:1,21:22:48.15:604,48,0	1/1:2,22:24:57.17:717,57,0	1/1:0,22:22:57.18:717,57,0	0/0:26,0:26:78.12:0,78,773	0/0:10,0:10:24.05:0,24,245	1/1:2,15:17:45.13:553,45,0	1/1:3,22:25:60.19:755,60,0	1/1:2,25:27:72.23:906,72,0	1/1:3,17:20:51.16:641,51,0	1/1:1,17:18:45.14:566,45,0	0/1:4,13:17:19.07:411,0,19	1/1:0,24:24:63.20:793,63,0	1/1:1,26:27:47.64:912,48,0	1/1:3,24:27:69.22:868,69,0	1/1:0,6:6:18.06:226,18,0
chr10	29415401	.	CT	C	9859.93	PASS	AB=0.836;AC=45;AF=0.804;AN=56;BaseQRankSum=1.392;DP=621;FS=6.851;HRun=11;HaplotypeScore=116.0944;InbreedingCoeff=0.6709;MQ=68.54;MQ0=1;MQRankSum=-2.548;QD=18.06;ReadPosRankSum=1.776;VQSLOD=4.5821;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:0,0:24:53.20:0,53,251	1/1:3,12:16:37.99:301,38,0	0/1:19,0:17:22.75:23,0,109	0/0:11,0:9:14.54:0,15,122	1/1:5,20:25:62.83:509,63,0	1/1:5,34:39:83.88:690,84,0	1/1:2,27:29:65.92:542,66,0	1/1:8,28:36:80.82:653,81,0	0/0:13,0:13:32.82:0,33,248	1/1:3,23:26:62.88:511,63,0	1/1:3,17:20:24.58:345,25,0	1/1:1,22:23:53.81:444,54,0	1/1:2,25:27:62.90:517,63,0	1/1:2,17:19:50.93:419,51,0	1/1:1,18:20:52.98:425,53,0	1/1:1,21:22:59.93:493,60,0	0/0:25,2:27:19.46:0,19,438	0/1:13,2:15:13.38:13,0,202	1/1:9,16:25:45.99:372,46,0	1/1:7,21:29:64.92:523,65,0	1/1:0,9:9:26.97:222,27,0	1/1:4,23:27:65.91:542,66,0	1/1:7,17:24:41.94:345,42,0	1/1:1,19:20:53.94:443,54,0	1/1:1,17:18:50.94:419,51,0	1/1:1,23:24:65.91:539,66,0	1/1:5,20:28:66.03:510,66,0	0/1:2,3:5:8.90:62,0,9
chr10	29415629	.	AACATACAC	A	5563.23	PASS	AB=0.557;AC=37;AF=0.685;AN=54;BaseQRankSum=7.294;DP=543;FS=1.734;HRun=0;HaplotypeScore=244.1923;InbreedingCoeff=0.7574;MQ=57.02;MQ0=4;MQRankSum=-3.734;QD=14.45;ReadPosRankSum=0.932;VQSLOD=3.8186;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:51.10:0,51,767	1/1:0,9:10:9.03:232,9,0	0/0:18,0:12:22.65:0,23,287	0/0:27,0:15:32.16:0,32,799	0/1:4,15:19:0:1,0,0	1/1:9,5:15:24:324,24,0	1/1:0,18:18:3.01:84,3,0	1/1:6,21:27:50.63:531,51,0	0/0:23,0:23:57.12:0,57,1616	1/1:5,16:22:53.68:960,54,0	0/1:3,11:14:0:0,0,0	1/1:11,10:22:10.18:521,10,0	1/1:2,20:23:23.48:411,23,0	1/1:8,7:16:14.63:175,15,0	1/1:4,25:31:5.95:102,6,0	1/1:9,12:21:27.03:518,27,0	0/0:24,0:23:47.76:0,48,438	0/0:17,0:16:38.98:0,39,416	1/1:5,2:8:14.95:214,15,0	1/1:8,7:17:17.97:148,18,0	1/1:1,19:20:5.99:48,6,0	0/1:5,15:21:0:0,0,0	./.	0/1:3,12:15:0:0,0,0	0/1:4,18:22:0:0,0,0	1/1:1,20:21:48.08:757,48,0	1/1:9,7:17:26.59:371,27,0	1/1:2,1:3:6.02:165,6,0
chr10	29415633	.	TACAC	T	1757.14	PASS	AB=0.943;AC=38;AF=0.760;AN=50;BaseQRankSum=5.155;DP=546;FS=2.057;HRun=0;HaplotypeScore=233.8608;InbreedingCoeff=0.4870;MQ=54.20;MQ0=7;MQRankSum=-4.106;QD=4.44;ReadPosRankSum=1.071;VQSLOD=2.3551;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:24,1:34:5.66:6,0,115	1/1:12,0:12:7.73:82,8,0	0/0:18,0:12:2.84:0,3,14	0/0:30,0:13:15.05:0,15,305	1/1:17,0:17:0.47:1,0,0	1/1:14,0:13:7.25:59,7,0	1/1:19,0:18:3:28,3,0	1/1:23,0:23:3.55:52,4,0	0/0:22,0:29:36.12:0,36,693	1/1:22,0:21:32.06:300,32,0	0/1:17,0:16:0:0,0,0	1/1:23,0:23:17.74:157,18,0	1/1:23,0:23:13.73:129,14,0	1/1:15,0:15:2.99:28,3,0	1/1:32,0:31:1.70:26,2,0	1/1:19,0:19:15.02:140,15,0	1/1:17,7:24:12.04:192,12,0	1/1:12,5:16:21.07:336,21,0	1/1:6,0:6:6.01:56,6,0	./.	./.	0/1:20,0:19:0:0,0,0	./.	0/1:14,0:14:0:0,0,0	0/0:20,0:20:0:0,0,0	1/1:22,0:22:16.66:165,17,0	1/1:19,0:19:8.99:78,9,0	1/1:3,0:3:6:52,6,0
chr10	29415659	.	C	CG	235.61	PASS	AB=0.841;AC=16;AF=0.296;AN=54;BaseQRankSum=7.181;DP=627;FS=0.684;HRun=0;HaplotypeScore=260.6515;InbreedingCoeff=0.0586;MQ=34.96;MQ0=12;MQRankSum=-5.453;QD=0.75;ReadPosRankSum=1.651;VQSLOD=2.1703;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:23.76:0,24,218	0/1:10,2:12:2.75:3,0,12	0/0:24,0:6:15.01:0,15,186	0/0:32,0:14:42.14:0,42,578	0/0:14,4:15:0.88:0,1,2	0/1:13,5:16:8.72:9,0,29	0/0:17,0:14:11.39:0,11,132	0/0:39,0:37:7.02:0,7,854	0/0:34,0:34:48.83:0,49,537	0/0:22,1:22:7.45:0,7,226	./.	0/0:19,0:19:8.57:0,9,79	0/1:23,8:31:97.17:134,0,97	1/1:26,2:28:2.68:12,3,0	0/1:25,12:36:3.15:6,0,3	0/1:20,6:26:23.62:24,0,66	0/0:28,0:27:41.34:0,41,465	0/0:22,0:21:38.39:0,38,355	0/1:8,1:9:3.86:4,0,141	0/1:19,0:19:0.30:2,0,0	0/1:15,1:14:0:0,0,0	0/1:19,5:23:0:0,0,0	0/1:16,4:19:0:0,0,0	0/0:8,3:11:0:0,0,0	0/1:19,9:28:0:0,0,1	0/1:18,3:20:77.25:77,0,173	0/1:16,4:20:54.90:55,0,87	0/1:3,1:4:31.69:32,0,80
chr10	29415661	.	C	CGAT	477.95	PASS	AB=0.978;AC=19;AF=0.339;AN=56;BaseQRankSum=5.756;DP=613;FS=4.567;HRun=0;HaplotypeScore=263.4005;InbreedingCoeff=0.0843;MQ=34.30;MQ0=12;MQRankSum=-4.751;QD=1.45;ReadPosRankSum=-2.230;VQSLOD=1.7054;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:12.32:0,12,199	0/0:12,0:12:1.26:0,1,18	0/0:26,0:7:15.05:0,15,237	0/0:31,0:15:42.14:0,42,746	0/1:18,0:15:0.09:0,0,0	0/1:16,0:14:2.69:3,0,32	0/0:17,0:14:11.94:0,12,155	0/0:38,0:36:35.46:0,35,990	0/0:34,0:34:44.92:0,45,587	0/1:22,1:22:42.42:42,0,250	0/1:22,1:21:0:0,0,0	0/0:16,0:18:13.72:0,14,87	0/1:30,0:30:60.46:176,0,60	1/1:27,0:27:3.86:49,4,0	0/0:37,0:36:0.05:0,0,1	0/1:24,2:26:46.91:47,0,95	0/0:27,0:26:41.56:0,42,577	0/0:22,0:21:39.58:0,40,535	0/1:9,0:9:39.60:40,0,83	1/1:19,0:19:2.74:12,3,0	0/1:15,0:13:0:0,0,0	0/1:20,2:21:0.17:0,0,0	0/1:19,0:18:0:0,0,0	0/1:11,0:11:0:0,0,0	0/1:28,0:28:0:0,0,1	0/1:20,0:19:92.83:93,0,178	0/1:18,2:20:63.66:120,0,64	0/1:4,0:4:23.90:24,0,103
chr10	29415667	.	C	CGATAGATA	5473.77	PASS	AB=0.987;AC=37;AF=0.712;AN=52;BaseQRankSum=5.089;DP=665;FS=5.308;HRun=0;HaplotypeScore=336.8700;InbreedingCoeff=0.5647;MQ=33.38;MQ0=14;MQRankSum=-7.990;QD=10.71;ReadPosRankSum=-0.757;VQSLOD=2.3140;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:31,0:31:4.25:48,4,0	1/1:10,0:10:6.02:76,6,0	0/1:28,0:7:1.01:1,0,199	0/0:30,0:13:30.04:0,30,468	./.	1/1:15,2:16:8.96:93,9,0	1/1:14,0:10:0.47:1,0,0	1/1:38,0:34:46.66:468,47,0	0/0:33,0:34:23.66:0,24,342	1/1:27,0:26:48.04:961,48,0	./.	1/1:22,0:22:10.46:99,10,0	1/1:29,1:30:30.04:810,30,0	1/1:14,14:29:3.48:120,3,0	1/1:44,0:43:3.01:69,3,0	0/1:27,0:27:5.07:173,0,5	0/0:27,0:27:42.05:0,42,639	0/0:22,0:21:33.11:0,33,580	1/1:17,0:17:36.04:691,36,0	0/1:21,0:22:0:0,0,0	0/1:13,0:11:0:0,0,0	1/1:25,0:24:2.95:20,3,0	0/1:19,1:19:0:0,0,0	0/1:13,0:13:0:0,0,0	0/1:30,0:29:0.25:1,0,0	1/1:19,0:19:39.04:796,39,0	1/1:24,1:25:30.01:812,30,0	1/1:7,0:7:12.04:234,12,0
chr10	29415671	.	A	AGATAGATA	5486.94	PASS	AB=0.967;AC=37;AF=0.712;AN=52;BaseQRankSum=5.393;DP=679;FS=4.226;HRun=0;HaplotypeScore=349.9843;InbreedingCoeff=0.5636;MQ=32.76;MQ0=13;MQRankSum=-7.802;QD=10.39;ReadPosRankSum=-0.589;VQSLOD=2.3890;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:32,0:32:4.25:48,4,0	1/1:10,0:10:6.02:76,6,0	0/1:28,0:7:1.01:1,0,199	0/0:28,0:11:30.04:0,30,468	./.	1/1:18,0:16:8.96:93,9,0	1/1:16,0:12:0.47:1,0,0	1/1:39,0:32:46.66:468,47,0	0/0:33,0:34:23.66:0,24,342	1/1:28,0:27:50.08:967,50,0	./.	1/1:25,0:25:10.46:99,10,0	1/1:31,0:31:30.04:810,30,0	1/1:30,0:30:3.48:120,3,0	1/1:44,0:43:3.01:69,3,0	0/1:30,0:30:5.07:173,0,5	0/0:27,0:27:39.04:0,39,604	0/0:21,0:20:33.11:0,33,580	1/1:17,0:16:38.26:698,38,0	0/1:16,6:23:0:1,0,0	0/1:14,0:13:0:0,0,0	1/1:26,0:26:2.95:20,3,0	0/1:20,0:19:0:0,0,0	0/1:14,0:14:0:0,0,0	0/1:30,0:29:0.25:1,0,0	1/1:20,0:19:39.04:796,39,0	1/1:25,0:25:30.01:812,30,0	1/1:8,0:8:12.04:234,12,0
chr10	29415686	.	TAGAC	T	714.86	PASS	AB=0.964;AC=23;AF=0.426;AN=54;BaseQRankSum=-5.041;DP=693;FS=12.010;HRun=0;HaplotypeScore=340.7574;InbreedingCoeff=0.0866;MQ=33.72;MQ0=10;MQRankSum=-0.049;QD=1.73;ReadPosRankSum=-0.893;VQSLOD=0.5172;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:27:12.01:12,0,112	1/1:13,0:13:5.87:35,6,0	0/0:31,0:9:8.92:0,9,67	0/0:28,0:17:20.95:0,21,178	1/1:17,0:14:1.82:15,2,0	0/0:22,0:21:1.96:0,2,6	1/1:16,0:12:1.15:14,1,0	1/1:32,0:24:8.85:59,9,0	1/1:13,0:37:2.36:27,2,0	0/1:23,0:23:20.87:21,0,393	./.	0/0:27,0:27:2.60:0,3,28	0/0:32,0:32:23.55:0,24,211	0/1:30,0:30:10.04:10,0,27	0/0:47,0:46:1.36:0,1,4	0/1:31,0:31:5.67:6,0,53	1/1:12,19:31:24.05:356,24,0	0/1:7,14:20:40.63:221,0,41	0/1:19,0:17:4.95:5,0,150	0/0:21,0:21:5.03:0,5,30	0/0:11,0:9:0.47:0,0,1	0/0:26,0:26:3:0,3,40	0/1:19,0:18:0:0,0,0	0/1:15,0:15:0.26:0,0,0	0/1:33,0:32:0.22:0,0,0	0/1:21,0:21:63.93:64,0,315	0/1:28,0:28:9.07:9,0,255	0/0:8,0:8:3.01:0,3,36
chr10	29416501	.	C	CGTGT	16024.60	PASS	AB=0.726;AC=43;AF=0.768;AN=56;BaseQRankSum=-5.431;DP=775;FS=8.153;HRun=0;HaplotypeScore=136.6376;InbreedingCoeff=0.4980;MQ=66.40;MQ0=4;MQRankSum=1.672;QD=24.84;ReadPosRankSum=-0.702;VQSLOD=4.0309;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:31,0:39:14.69:185,15,0	1/1:4,8:13:23.60:461,24,0	0/0:46,0:27:25.30:0,25,323	0/1:38,0:29:23.79:24,0,173	1/1:12,14:27:35.86:811,36,0	1/1:12,11:25:23.55:461,24,0	0/1:19,7:28:61.58:533,0,62	1/1:29,6:42:44.32:726,44,0	0/0:29,0:29:63.21:0,63,1021	1/1:21,15:38:50.89:1109,51,0	1/1:9,6:19:6.66:373,7,0	1/1:9,18:32:53.39:1125,53,0	1/1:13,13:28:44.89:1026,45,0	1/1:7,15:24:38.60:824,39,0	0/1:6,12:21:15.98:574,0,16	1/1:14,17:33:50.31:1103,50,0	0/0:27,0:28:57.19:0,57,903	0/0:25,0:27:51.16:0,51,767	1/1:24,4:26:23.81:399,24,0	1/1:11,11:27:44.61:927,45,0	0/1:16,14:32:3.81:766,0,4	1/1:7,15:24:44.85:940,45,0	1/1:8,8:20:26.56:521,27,0	1/1:8,13:21:32.53:797,33,0	0/1:11,11:27:24.96:424,0,25	1/1:10,12:25:47.87:945,48,0	1/1:8,11:22:35.86:754,36,0	1/1:6,3:9:9.03:218,9,0
chr10	29417006	.	CCTTACAGAGACCTCGTTG	C	2728.40	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.153;DP=674;FS=4.656;HRun=0;HaplotypeScore=308.8563;InbreedingCoeff=0.9844;MQ=81.96;MQ0=0;MQRankSum=-7.201;QD=113.68;ReadPosRankSum=1.381;VQSLOD=3.0770;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,24:24:54.19:2823,54,0	0/0:13,0:13:39.12:0,39,3041	0/0:23,0:23:69.18:0,69,3604	0/0:21,0:21:60.21:0,60,3472	0/0:29,0:29:87.28:0,87,5748	0/0:25,0:25:75.26:0,75,6044	0/0:22,0:22:66.23:0,66,5697	0/0:24,0:24:72.24:0,72,5439	0/0:23,0:23:69.24:0,69,5974	0/0:28,0:28:84.29:0,84,6932	0/0:21,0:21:60.21:0,60,4993	0/0:27,0:27:81.27:0,81,6266	0/0:24,0:24:72.25:0,72,5855	0/0:27,0:27:78.27:0,78,6244	0/0:30,0:30:90.31:0,90,7439	0/0:22,0:22:66.23:0,66,5476	0/0:32,0:32:96.33:0,96,7994	0/0:15,0:15:45.15:0,45,3691	0/0:15,0:15:45.15:0,45,3394	0/0:38,0:38:99:0,114,9574	0/0:28,0:28:84.29:0,84,6702	0/0:23,0:23:66.22:0,66,5340	0/0:18,0:18:51.18:0,51,4290	0/0:20,0:20:57.20:0,57,4744	0/0:33,0:33:99:0,99,7599	0/0:24,0:24:72.23:0,72,5807	0/0:40,0:40:99:0,120,8837	0/0:5,0:5:15.05:0,15,1344
chr10	29417469	.	TG	T	1180.42	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-6.716;DP=728;FS=3.111;HRun=3;HaplotypeScore=119.1516;InbreedingCoeff=0.9950;MQ=88.81;MQ0=0;MQRankSum=-1.145;QD=32.79;ReadPosRankSum=3.588;VQSLOD=3.0885;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,129,1837	0/0:7,0:7:18.05:0,18,241	0/0:32,0:32:89.79:0,90,1247	0/0:22,0:22:59.04:0,59,752	0/0:29,0:29:75.25:0,75,1078	0/0:24,0:24:69.23:0,69,994	0/0:17,0:17:51.16:0,51,715	0/0:35,0:35:99:0,99,1393	0/0:20,0:20:57.19:0,57,821	0/0:39,0:39:99:0,108,1520	0/0:17,0:17:42.14:0,42,605	0/0:35,0:35:99:0,105,1478	0/0:27,0:27:78.26:0,78,1123	0/0:27,0:27:75.25:0,75,1080	0/0:30,0:30:84.28:0,84,1209	0/0:23,0:23:69.23:0,69,993	1/1:0,26:26:78.25:967,78,0	1/1:0,10:10:27.08:335,27,0	0/0:31,0:31:93.26:0,93,1282	0/0:32,0:32:93.30:0,93,1320	0/0:33,0:33:99:0,99,1367	0/0:25,0:25:72.22:0,72,1002	0/0:18,0:18:42.13:0,42,586	0/0:39,0:39:99:0,117,1681	0/0:31,0:31:90.71:0,91,1254	0/0:20,0:19:57.13:0,57,764	0/0:22,0:22:63.21:0,63,899	0/0:10,0:10:30.10:0,30,432
chr10	29419327	.	TTTTGTTTG	T	1519.34	PASS	AB=1.000;AC=40;AF=0.714;AN=56;BaseQRankSum=8.418;DP=616;FS=1.771;HRun=0;HaplotypeScore=257.0836;InbreedingCoeff=0.4079;MQ=64.35;MQ0=2;MQRankSum=-8.413;QD=2.94;ReadPosRankSum=1.287;VQSLOD=2.6831;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,13:19:24.04:568,24,0	1/1:11,0:11:3.30:7,3,0	0/0:25,0:19:32.07:0,32,1133	0/0:17,0:15:23.65:0,24,869	1/1:26,0:26:7.34:40,7,0	1/1:24,0:24:8.43:15,8,0	0/1:13,0:13:0.74:1,0,5	0/1:39,0:38:24.28:24,0,75	1/1:2,12:14:30.10:786,30,0	1/1:29,0:27:13.84:45,14,0	0/1:23,0:23:13.69:14,0,24	1/1:27,0:27:9.43:17,9,0	0/1:22,0:22:0.97:4,0,1	1/1:21,0:21:9.84:18,10,0	1/1:24,0:24:1.30:6,1,0	1/1:20,0:20:5.72:10,6,0	0/0:27,0:27:69.20:0,69,2644	0/0:17,0:17:36.04:0,36,1249	0/1:18,0:17:0.77:1,0,50	1/1:24,0:24:8.90:16,9,0	0/0:14,0:14:1.52:0,2,7	1/1:25,0:25:4.20:28,4,0	1/1:22,0:22:0.35:5,0,0	1/1:6,0:6:1.16:2,1,0	1/1:31,0:31:6.47:13,6,0	0/1:27,0:27:8.96:36,0,9	1/1:40,0:39:7.39:20,7,0	1/1:11,0:11:3.30:6,3,0
chr10	29419331	.	GTTTGT	G	25195.14	PASS	AB=1.000;AC=46;AF=0.821;AN=56;BaseQRankSum=7.566;DP=602;FS=25.435;HRun=0;HaplotypeScore=138.5920;InbreedingCoeff=0.7429;MQ=59.85;MQ0=3;MQRankSum=-4.974;QD=48.64;ReadPosRankSum=6.065;VQSLOD=3.3694;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:17,0:17:72.62:190,0,73	1/1:0,11:11:21.07:455,21,0	0/0:27,0:20:54.06:0,54,1157	0/0:14,0:12:30.09:0,30,773	1/1:0,27:28:75.24:1515,75,0	1/1:0,22:22:51.18:1096,51,0	1/1:1,12:13:33.11:698,33,0	1/1:6,30:35:84.25:1428,84,0	0/1:14,0:14:46.28:282,0,46	1/1:2,27:26:75.26:1584,75,0	1/1:1,20:21:51.17:985,51,0	1/1:0,26:26:60.21:1302,60,0	1/1:0,22:22:63.22:1349,63,0	1/1:0,21:21:60.21:1302,60,0	1/1:0,24:24:57.20:1214,57,0	1/1:1,19:20:38.81:846,39,0	0/0:27,0:27:78.27:0,78,2220	0/0:16,0:16:45.15:0,45,1170	1/1:0,16:15:45.09:716,45,0	1/1:1,23:24:60.20:1228,60,0	1/1:2,11:14:18.02:337,18,0	1/1:0,24:24:69.24:1441,69,0	1/1:0,22:22:59.95:1262,60,0	1/1:1,5:6:9.50:196,10,0	1/1:0,32:32:78.27:1684,78,0	1/1:0,27:27:78.26:1530,78,0	1/1:2,38:39:99:2098,99,0	1/1:0,9:9:21.07:456,21,0
chr10	29420378	.	A	ATGTTTG	4116.14	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-2.798;DP=733;FS=3.878;HRun=0;HaplotypeScore=145.2449;InbreedingCoeff=0.9606;MQ=84.35;MQ0=0;MQRankSum=-9.797;QD=82.32;ReadPosRankSum=-0.231;VQSLOD=4.9285;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,16:20:45.15:1684,45,0	0/0:10,0:10:30.09:0,30,681	0/0:25,0:25:68.96:0,69,1439	0/0:21,0:21:48.01:0,48,1173	0/0:29,0:28:87.26:0,87,2092	0/0:40,0:40:99:0,120,2959	0/0:17,0:17:48.14:0,48,1144	0/0:30,0:30:90.30:0,90,2197	0/0:34,0:34:96.33:0,96,2379	0/0:31,0:31:93.32:0,93,2349	0/0:23,0:23:66.20:0,66,1511	0/0:26,0:26:78.27:0,78,1991	0/0:32,0:32:90.31:0,90,2215	0/0:21,0:21:60.19:0,60,1469	0/0:39,0:39:99:0,111,2730	0/0:30,0:30:87.28:0,87,2143	1/1:4,18:22:48.16:1800,48,0	1/1:2,5:8:18.06:632,18,0	0/0:37,0:37:99:0,111,2730	0/0:36,0:36:99:0,108,2660	0/0:33,0:33:99:0,99,2524	0/0:33,0:33:99:0,99,2324	0/0:24,0:24:72.22:0,72,1673	0/0:13,0:13:39.13:0,39,993	0/0:27,0:27:81.28:0,81,2050	0/0:28,0:28:84.24:0,84,1896	0/0:41,0:41:99:0,120,3015	0/0:3,0:2:6.02:0,6,128
chr10	29422813	.	AG	A	24826.64	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-0.505;DP=701;FS=2.611;HRun=1;HaplotypeScore=70.0775;InbreedingCoeff=0.9838;MQ=88.81;MQ0=0;MQRankSum=-11.539;QD=38.14;ReadPosRankSum=7.215;VQSLOD=4.7014;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,35:35:96.27:1317,96,0	1/1:0,10:10:27.09:377,27,0	0/0:31,0:31:90.25:0,90,1337	0/0:19,0:19:54.11:0,54,797	1/1:0,35:35:96.22:1296,96,0	1/1:0,23:23:66.22:916,66,0	1/1:0,20:20:51.17:713,51,0	1/1:0,27:27:81.26:1115,81,0	1/1:0,17:17:45.15:629,45,0	1/1:0,29:29:84.28:1167,84,0	1/1:0,32:32:93.31:1295,93,0	1/1:0,33:33:87.29:1215,87,0	1/1:0,27:27:78.26:1090,78,0	1/1:0,21:21:54.18:754,54,0	1/1:0,31:31:93.31:1299,93,0	1/1:0,25:25:66.22:922,66,0	1/1:0,27:27:63.07:832,63,0	1/1:0,22:22:60.20:838,60,0	1/1:1,29:30:89.99:1116,90,0	1/1:0,14:14:42.04:542,42,0	1/1:0,32:32:90.30:1257,90,0	1/1:0,26:26:72.24:1006,72,0	1/1:1,27:28:72.19:982,72,0	1/1:0,21:21:54.18:754,54,0	1/1:0,28:28:81.27:1132,81,0	1/1:0,22:22:66.22:923,66,0	1/1:0,31:31:84.28:1173,84,0	1/1:0,5:5:12.04:168,12,0
chr10	29424707	.	GA	G	474.45	PASS	AB=0.897;AC=12;AF=0.214;AN=56;BaseQRankSum=4.629;DP=470;FS=9.071;HRun=14;HaplotypeScore=65.4591;InbreedingCoeff=0.2636;MQ=77.80;MQ0=3;MQRankSum=0.813;QD=3.36;ReadPosRankSum=4.152;VQSLOD=-0.4462;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,1:25:9.85:0,10,447	0/1:6,1:8:12.41:12,0,70	0/0:29,1:19:13.86:0,14,80	0/1:22,1:17:8.03:8,0,48	0/0:23,2:27:2.16:0,2,348	0/0:9,1:10:24.01:0,24,215	0/0:13,0:13:27.03:0,27,251	0/0:31,1:34:14.13:0,14,428	1/1:3,10:13:12.61:185,13,0	0/0:18,0:20:38.15:0,38,370	0/0:11,0:11:2.03:0,2,145	0/0:10,0:10:15:0,15,132	0/0:12,0:13:23.85:0,24,206	0/0:17,0:17:39.01:0,39,351	0/0:13,0:13:26.97:0,27,236	0/1:11,1:13:14.27:14,0,155	1/1:4,13:17:35.68:247,36,0	1/1:7,8:16:2.64:109,3,0	0/0:20,0:21:26.15:0,26,259	0/0:24,0:24:54:0,54,481	0/1:14,1:15:14.31:14,0,147	0/0:19,0:20:28.86:0,29,267	0/0:15,0:16:23.56:0,24,241	0/0:7,0:9:17.70:0,18,140	0/0:11,0:11:14.92:0,15,128	0/1:16,2:19:32.50:33,0,182	0/1:14,2:16:4.82:5,0,238	0/0:5,0:5:9.01:0,9,84
chr10	29424775	.	CT	C	6730.84	PASS	AB=0.870;AC=47;AF=0.839;AN=56;BaseQRankSum=3.861;DP=404;FS=9.521;HRun=11;HaplotypeScore=43.2083;InbreedingCoeff=0.6306;MQ=66.84;MQ0=3;MQRankSum=0.542;QD=18.75;ReadPosRankSum=1.132;VQSLOD=5.3665;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:18:45.18:0,45,410	1/1:0,4:4:11.99:99,12,0	0/1:7,1:4:15.63:16,0,54	0/1:7,0:7:1.63:3,0,2	1/1:7,18:26:55.83:439,56,0	1/1:1,12:13:35.96:296,36,0	1/1:1,13:14:38.95:320,39,0	1/1:11,19:31:49.88:396,50,0	1/1:0,10:10:29.97:246,30,0	1/1:3,17:20:47.86:390,48,0	1/1:1,20:21:59.92:493,60,0	1/1:0,11:11:23.97:197,24,0	1/1:3,8:11:23.96:197,24,0	0/1:8,5:13:5.07:162,0,5	1/1:2,1:3:7.24:52,7,0	1/1:1,8:9:20.98:172,21,0	0/0:12,0:12:30.08:0,30,320	0/0:14,0:14:30.07:0,30,317	1/1:2,14:16:41.94:344,42,0	1/1:1,12:13:38.96:320,39,0	1/1:2,12:13:35.96:296,36,0	1/1:1,20:21:53.81:433,54,0	1/1:4,11:15:0.97:214,1,0	1/1:4,7:11:26.96:221,27,0	1/1:1,21:22:56.93:468,57,0	1/1:3,19:22:56.91:465,57,0	1/1:3,7:9:20.96:172,21,0	1/1:0,13:13:38.96:320,39,0
chr10	29425882	.	ATG	A	15789.47	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=6.245;DP=529;FS=20.990;HRun=0;HaplotypeScore=68.2869;InbreedingCoeff=0.9972;MQ=86.75;MQ0=0;MQRankSum=-6.486;QD=38.42;ReadPosRankSum=3.512;VQSLOD=4.7521;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:96.33:0,96,1729	1/1:1,7:8:18.06:257,18,0	0/0:20,0:20:59.87:0,60,1021	0/0:18,0:18:50.76:0,51,828	1/1:0,17:17:45.15:645,45,0	1/1:0,26:26:72.24:1032,72,0	1/1:2,19:21:45.15:645,45,0	1/1:2,40:42:99:1657,120,0	0/0:21,0:21:57.20:0,57,1044	1/1:0,22:22:63.21:903,63,0	1/1:0,17:17:51.17:724,51,0	1/1:0,27:27:72.24:1032,72,0	1/1:0,13:13:36.12:516,36,0	1/1:0,16:16:39.13:559,39,0	1/1:1,24:25:66.22:946,66,0	1/1:0,15:15:39.13:559,39,0	0/0:15,0:15:39.12:0,39,684	0/0:11,0:11:33.11:0,33,605	1/1:3,16:19:51.17:731,51,0	1/1:0,16:16:48.16:688,48,0	1/1:1,18:19:51.17:731,51,0	1/1:1,10:11:27.09:387,27,0	1/1:0,12:12:36.12:515,36,0	1/1:1,16:17:42.14:602,42,0	1/1:0,20:20:57.19:817,57,0	1/1:0,19:19:57.19:817,57,0	1/1:0,19:19:51.17:729,51,0	1/1:0,10:10:21.07:301,21,0
chr10	29429168	.	CGT	C	103.87	PASS	AB=0.938;AC=11;AF=0.220;AN=50;BaseQRankSum=3.750;DP=600;FS=4.203;HRun=0;HaplotypeScore=95.9726;InbreedingCoeff=-0.1419;MQ=58.88;MQ0=7;MQRankSum=0.444;QD=0.51;ReadPosRankSum=0.444;VQSLOD=1.2281;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:6.01:0,6,69	0/1:8,1:9:17.21:17,0,137	./.	./.	0/1:20,3:22:40.35:40,0,223	0/1:13,0:13:22.98:23,0,59	0/1:24,2:26:14.22:14,0,180	./.	1/1:16,0:22:8.44:41,8,0	0/0:20,0:20:9.03:0,9,129	0/0:12,0:12:9.03:0,9,130	0/1:17,1:19:31.32:31,0,84	0/0:21,0:21:6.02:0,6,87	0/0:25,0:25:15.03:0,15,179	0/0:21,0:21:15.05:0,15,216	0/0:8,0:8:3.01:0,3,44	0/1:24,3:28:37.41:37,0,240	0/0:18,0:18:15.52:0,16,214	0/0:15,0:15:2.52:0,3,43	0/0:20,0:20:15.05:0,15,213	0/0:49,0:49:24.05:0,24,314	0/1:15,0:15:13.30:13,0,152	0/0:21,0:22:21.06:0,21,284	0/1:25,1:26:11.19:11,0,238	0/1:21,1:22:14.20:14,0,197	0/0:20,0:20:8.76:0,9,81	0/0:12,0:12:12.04:0,12,177	0/0:8,0:8:9.03:0,9,132
chr10	29430935	.	AT	A	10722.89	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=0.250;DP=570;FS=0.839;HRun=8;HaplotypeScore=70.9715;InbreedingCoeff=0.9964;MQ=70.28;MQ0=1;MQRankSum=-1.974;QD=23.83;ReadPosRankSum=2.440;VQSLOD=5.6775;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:84.25:0,84,1003	1/1:0,9:9:27.04:261,27,0	0/0:13,0:11:24.07:0,24,297	0/0:14,0:13:24.43:0,24,257	1/1:3,22:25:66.10:637,66,0	1/1:1,21:22:57.09:550,57,0	1/1:1,14:15:24.04:232,24,0	1/1:6,28:34:84.10:806,84,0	0/0:20,0:20:60.17:0,60,713	1/1:5,12:17:45.06:430,45,0	1/1:1,14:15:42.07:405,42,0	1/1:3,16:19:23.45:358,23,0	1/1:1,23:24:66.11:637,66,0	1/1:3,22:25:63.10:608,63,0	1/1:1,32:33:84.14:811,84,0	1/1:1,22:23:54.08:521,54,0	0/0:23,0:23:63.15:0,63,744	0/0:21,0:21:54.17:0,54,652	1/1:0,16:16:48.08:463,48,0	1/1:2,26:28:69.02:648,69,0	1/1:1,16:17:45.07:435,45,0	1/1:2,7:9:18.03:174,18,0	1/1:1,21:22:60.09:579,60,0	1/1:1,13:14:33.05:319,33,0	1/1:4,21:25:57.09:550,57,0	1/1:2,19:21:57.08:546,57,0	1/1:0,23:23:42.07:406,42,0	1/1:2,12:14:36.06:347,36,0
chr10	29431101	.	T	TCCA	30249.55	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-2.849;DP=623;FS=1.263;HRun=0;HaplotypeScore=103.9277;InbreedingCoeff=0.9155;MQ=87.60;MQ0=0;MQRankSum=-10.965;QD=53.07;ReadPosRankSum=7.416;VQSLOD=6.8829;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,28:32:72.25:1607,72,0	1/1:0,10:10:30.10:655,30,0	0/0:31,0:31:81.10:0,81,1145	0/0:22,0:21:51.15:0,51,784	1/1:2,39:43:96.26:2061,96,0	1/1:1,14:15:39.13:870,39,0	1/1:2,11:13:27.09:602,27,0	1/1:2,28:30:87.30:1882,87,0	1/1:1,14:16:36.12:804,36,0	1/1:1,24:28:78.25:1633,78,0	1/1:2,17:19:33.11:736,33,0	1/1:2,16:19:42.08:889,42,0	1/1:4,19:23:54.19:1200,54,0	1/1:2,20:22:54.14:1157,54,0	1/1:1,24:25:72.25:1585,72,0	1/1:1,16:20:51.18:1132,51,0	1/1:2,19:21:45.63:1006,46,0	1/1:0,16:16:42.14:938,42,0	1/1:6,21:28:69.24:1500,69,0	1/1:2,26:28:78.27:1711,78,0	1/1:3,18:22:33.11:737,33,0	1/1:3,15:19:36.12:804,36,0	1/1:1,22:23:66.23:1472,66,0	1/1:2,16:18:42.14:938,42,0	1/1:1,22:24:60.21:1339,60,0	1/1:1,21:22:63.22:1385,63,0	1/1:3,25:30:69.24:1539,69,0	1/1:1,2:3:3.01:67,3,0
chr10	29431454	.	G	GAA	10774.23	PASS	AB=1.000;AC=51;AF=0.911;AN=56;BaseQRankSum=-5.233;DP=603;FS=5.813;HRun=10;HaplotypeScore=113.2227;InbreedingCoeff=0.6464;MQ=70.81;MQ0=1;MQRankSum=-2.650;QD=19.00;ReadPosRankSum=1.157;VQSLOD=3.7345;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,19:25:21.07:312,21,0	1/1:2,2:4:6.02:89,6,0	0/1:14,0:12:3.43:3,0,25	0/0:19,0:18:9.90:0,10,198	1/1:3,19:27:65.74:726,66,0	1/1:7,19:30:39.12:668,39,0	1/1:4,9:14:27.05:377,27,0	1/1:19,9:30:51.24:633,51,0	0/0:17,0:17:1.47:0,1,28	1/1:21,13:35:71.18:858,71,0	1/1:2,8:20:38.83:434,39,0	1/1:4,13:18:32.14:356,32,0	1/1:11,11:26:29.88:336,30,0	1/1:2,12:14:24.08:356,24,0	1/1:2,21:25:42.01:556,42,0	1/1:4,16:22:36.11:501,36,0	1/1:22,1:36:50.30:413,50,0	1/1:8,0:20:20.34:115,20,0	1/1:5,8:13:23.82:248,24,0	1/1:8,15:23:42.02:549,42,0	1/1:3,2:6:8.93:67,9,0	1/1:7,11:20:18.97:279,19,0	1/1:5,20:28:38.83:449,39,0	1/1:4,18:25:32.91:580,33,0	1/1:4,16:24:41.67:512,42,0	1/1:8,21:33:64.58:861,65,0	1/1:11,13:25:13.22:379,13,0	1/1:3,3:7:9.50:118,9,0
chr10	29431464	.	AC	A	6548.10	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=0.699;DP=551;FS=2.607;HRun=1;HaplotypeScore=111.4397;InbreedingCoeff=0.9162;MQ=68.16;MQ0=1;MQRankSum=-3.991;QD=12.50;ReadPosRankSum=2.799;VQSLOD=3.8261;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:24:33.76:189,34,0	1/1:3,0:3:8.75:57,9,0	0/0:9,0:8:17.97:0,18,183	0/0:18,0:17:34.19:0,34,369	1/1:28,0:28:56.89:302,57,0	1/1:28,0:28:47.01:284,47,0	1/1:12,0:12:31.18:181,31,0	1/1:32,0:32:67.66:481,68,0	1/1:3,12:15:37.08:530,37,0	1/1:30,1:31:81.57:544,82,0	1/1:18,0:18:40.92:234,41,0	1/1:18,0:18:28.70:159,29,0	1/1:18,0:18:32.85:179,33,0	1/1:12,0:12:21.71:99,22,0	1/1:29,0:29:49.90:313,50,0	1/1:22,0:22:39.24:222,39,0	1/1:33,2:35:80.97:542,81,0	1/1:15,0:15:28.57:162,29,0	1/1:12,0:11:26.97:194,27,0	1/1:21,0:21:48.65:298,49,0	1/1:6,0:6:9.45:83,9,0	1/1:18,0:18:17.74:123,18,0	1/1:22,0:22:42.21:227,42,0	1/1:24,0:24:33.52:174,34,0	1/1:23,0:23:48.59:298,49,0	1/1:31,0:31:68.45:437,68,0	1/1:22,0:21:26.91:168,27,0	1/1:5,0:5:11.62:69,12,0
chr10	29431818	.	C	CTG	27310.67	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-8.214;DP=632;FS=0.000;HRun=0;HaplotypeScore=68.7475;InbreedingCoeff=0.9821;MQ=89.65;MQ0=0;MQRankSum=-10.745;QD=47.01;ReadPosRankSum=5.651;VQSLOD=6.2646;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,34:39:93.32:1705,93,0	1/1:0,10:10:24.08:440,24,0	0/0:20,0:20:50.90:0,51,753	0/0:31,0:31:53.33:0,53,962	1/1:1,16:17:45.15:824,45,0	1/1:0,8:8:24.08:440,24,0	1/1:4,44:48:99:2365,129,0	1/1:1,35:37:99:1850,108,0	1/1:2,18:20:51.17:935,51,0	1/1:1,14:15:42.14:759,42,0	1/1:1,14:15:36.12:660,36,0	1/1:0,35:36:96.33:1746,96,0	1/1:2,16:18:42.14:768,42,0	1/1:1,19:20:51.17:935,51,0	1/1:1,24:25:66.23:1210,66,0	1/1:0,20:21:51.17:935,51,0	1/1:0,26:26:57.20:1045,57,0	1/1:1,14:15:33.11:605,33,0	1/1:3,15:19:54.18:949,54,0	1/1:1,19:21:51.17:935,51,0	1/1:0,29:29:84.29:1540,84,0	1/1:0,17:17:45.15:824,45,0	1/1:0,17:17:42.14:770,42,0	1/1:4,23:27:63.22:1155,63,0	1/1:2,16:18:42.14:769,42,0	1/1:1,27:28:81.26:1445,81,0	1/1:1,30:31:81.28:1484,81,0	1/1:0,4:4:12.04:220,12,0
chr10	29432306	.	T	TC	25001.51	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-13.142;DP=788;FS=1.306;HRun=4;HaplotypeScore=64.3498;InbreedingCoeff=0.9994;MQ=89.17;MQ0=0;MQRankSum=-9.266;QD=36.39;ReadPosRankSum=5.060;VQSLOD=4.8395;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,32:39:84.28:1148,84,0	1/1:1,9:10:27.09:369,27,0	0/0:29,0:29:81.17:0,81,864	0/0:34,0:34:90.15:0,90,977	1/1:1,26:27:69.19:922,69,0	1/1:0,30:30:81.27:1107,81,0	1/1:2,14:16:33.11:451,33,0	1/1:3,38:41:99:1556,114,0	1/1:0,21:21:60.20:821,60,0	1/1:3,47:50:99:1926,141,0	1/1:2,23:25:69.23:939,69,0	1/1:2,27:29:75.25:1024,75,0	1/1:2,31:33:87.29:1186,87,0	1/1:0,23:23:60.20:821,60,0	1/1:1,26:26:75.25:1026,75,0	1/1:0,31:31:90.30:1231,90,0	0/0:19,0:19:54.13:0,54,600	0/0:19,0:19:57.16:0,57,647	1/1:1,26:27:78.25:1047,78,0	1/1:0,27:27:75.25:1026,75,0	1/1:1,36:37:96.32:1313,96,0	1/1:1,31:32:78.26:1066,78,0	1/1:1,30:31:87.29:1190,87,0	1/1:0,32:32:90.30:1231,90,0	1/1:3,22:25:60.20:820,60,0	1/1:2,33:35:99:1350,99,0	1/1:2,28:30:78.26:1063,78,0	1/1:0,9:9:27.09:369,27,0
chr10	29433290	.	CCA	C	21333.09	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=10.628;DP=728;FS=4.344;HRun=0;HaplotypeScore=95.8488;InbreedingCoeff=0.9995;MQ=89.71;MQ0=5;MQRankSum=-6.812;QD=38.65;ReadPosRankSum=4.434;VQSLOD=6.9598;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,144,2574	1/1:0,15:15:36.12:525,36,0	0/0:31,0:31:90.13:0,90,1587	0/0:27,0:26:62.65:0,63,1031	1/1:0,24:24:72.24:1060,72,0	1/1:0,29:29:75.25:1104,75,0	1/1:0,22:22:51.17:750,51,0	1/1:1,40:41:99:1699,123,0	0/0:30,0:30:87.26:0,87,1582	1/1:0,29:29:87.29:1279,87,0	1/1:0,22:21:54.18:794,54,0	1/1:2,20:22:54.18:792,54,0	1/1:0,15:15:35.99:528,36,0	1/1:0,26:25:69.23:1016,69,0	1/1:2,35:37:90.30:1325,90,0	1/1:1,18:18:45.15:663,45,0	0/0:19,0:19:51.15:0,51,884	0/0:19,0:19:57.20:0,57,1053	1/1:0,20:20:60.18:845,60,0	1/1:1,35:36:99:1451,102,0	1/1:4,28:32:58.48:1084,58,0	1/1:0,22:21:60.20:883,60,0	1/1:1,20:21:53.90:795,54,0	1/1:0,25:25:60.20:883,60,0	1/1:1,22:22:63.21:926,63,0	1/1:1,25:26:78.14:1077,78,0	1/1:0,37:37:99:1501,102,0	1/1:0,9:9:24.08:353,24,0
chr10	29433639	.	A	AT	933.64	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=2.650;DP=691;FS=0.000;HRun=0;HaplotypeScore=64.2723;InbreedingCoeff=0.9913;MQ=88.29;MQ0=0;MQRankSum=-3.830;QD=34.58;ReadPosRankSum=1.902;VQSLOD=3.1579;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:93.31:0,93,1290	0/0:12,0:12:36.12:0,36,503	0/0:28,0:28:72.20:0,72,1048	0/0:24,0:24:47.88:0,48,701	0/0:22,0:22:63.21:0,63,879	0/0:23,0:23:69.21:0,69,947	0/0:18,0:18:48.16:0,48,671	0/0:32,0:32:87.29:0,87,1215	0/0:27,0:27:81.26:0,81,1115	0/0:25,0:25:75.25:0,75,1048	0/0:19,0:19:54.18:0,54,754	0/0:35,0:35:99:0,105,1468	0/0:23,0:23:63.21:0,63,880	0/0:25,0:25:75.25:0,75,1049	0/0:26,0:26:78.26:0,78,1088	0/0:32,0:32:96.32:0,96,1342	1/1:0,18:18:39.13:623,39,0	1/1:0,9:9:27.09:431,27,0	0/0:24,0:24:72.24:0,72,996	0/0:34,0:34:99:0,102,1424	0/0:31,0:31:90.30:0,90,1252	0/0:27,0:27:81.26:0,81,1115	0/0:28,0:28:84.28:0,84,1173	0/0:25,0:25:75.23:0,75,1030	0/0:28,0:28:84.28:0,84,1169	0/0:18,0:18:51.17:0,51,714	0/0:40,0:40:99:0,120,1640	0/0:5,0:5:15.05:0,15,203
chr10	29434077	.	TACACACACACACACAC	T	7487.19	PASS	AB=0.738;AC=42;AF=0.778;AN=54;BaseQRankSum=-0.360;DP=585;FS=4.496;HRun=0;HaplotypeScore=215.0359;InbreedingCoeff=0.3647;MQ=58.15;MQ0=24;MQRankSum=-2.570;QD=16.17;ReadPosRankSum=0.335;VQSLOD=3.3660;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:26:6.92:7,0,1187	1/1:5,6:9:6.02:263,6,0	./.	0/0:32,0:22:3.01:0,3,38	1/1:14,9:21:17.09:474,17,0	0/1:6,16:22:22.92:501,0,23	0/1:16,11:26:99:249,0,217	1/1:8,9:17:26.74:264,27,0	0/0:16,0:28:24.66:0,25,240	1/1:13,9:20:21.07:583,21,0	1/1:13,7:19:4.75:130,5,0	1/1:10,7:16:6.02:252,6,0	1/1:7,15:22:17.85:768,18,0	0/1:17,12:28:12.74:287,0,13	1/1:12,9:20:9.03:389,9,0	1/1:9,7:15:8.67:389,9,0	0/0:32,0:32:38.15:0,38,1002	0/0:14,0:13:18.06:0,18,635	1/1:14,5:19:10.24:354,10,0	1/1:10,7:16:6.02:139,6,0	1/1:18,0:16:2.97:20,3,0	1/1:11,6:14:8.99:283,9,0	1/1:7,11:20:18.43:506,18,0	1/1:12,12:23:3.01:131,3,0	1/1:7,12:17:9.03:394,9,0	1/1:15,1:15:10.70:383,11,0	1/1:12,11:21:14.80:610,15,0	1/1:6,0:9:3.01:112,3,0
chr10	29434110	.	ACACAC	A	2471.81	PASS	AB=0.943;AC=24;AF=0.429;AN=56;BaseQRankSum=11.552;DP=568;FS=2.124;HRun=0;HaplotypeScore=135.7448;InbreedingCoeff=-0.7264;MQ=47.49;MQ0=36;MQRankSum=-7.885;QD=5.30;ReadPosRankSum=10.711;VQSLOD=0.7144;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:14.50:0,15,860	0/1:10,0:9:29.12:55,0,29	0/0:20,0:9:27.09:0,27,336	0/0:25,0:15:38.65:0,39,491	0/1:15,0:13:82.35:82,0,94	0/1:24,0:23:99:107,0,196	0/1:27,0:27:45.80:46,0,281	0/1:20,0:20:58.61:59,0,533	0/1:32,0:31:43.81:44,0,579	0/1:19,0:17:99:171,0,295	0/1:16,0:14:34.83:35,0,99	0/1:13,0:12:55.12:55,0,133	0/1:29,0:29:99:147,0,294	0/1:18,0:18:43.13:43,0,154	0/1:18,0:17:76.89:77,0,165	0/1:15,0:15:67.60:68,0,269	0/1:8,25:30:66.86:711,0,67	0/1:8,10:14:97.94:258,0,98	0/1:11,0:10:99:154,0,108	0/1:15,0:14:1.26:1,0,206	0/0:21,0:23:12.02:0,12,317	0/1:15,0:12:59.98:60,0,165	0/1:17,0:17:51.55:160,0,52	0/1:22,0:21:22.99:23,0,66	0/1:19,0:18:72.26:72,0,165	0/1:18,0:15:80.84:81,0,280	0/1:20,0:18:99:109,0,159	0/1:10,0:11:9.65:10,0,205
chr10	29434730	.	CA	C	6624.13	PASS	AB=0.610;AC=37;AF=0.661;AN=56;BaseQRankSum=-2.965;DP=632;FS=0.417;HRun=12;HaplotypeScore=75.1404;InbreedingCoeff=0.4707;MQ=59.68;MQ0=11;MQRankSum=-0.092;QD=13.86;ReadPosRankSum=0.891;VQSLOD=5.3041;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:37:68.88:0,69,650	1/1:1,7:8:20.92:163,21,0	0/0:19,0:6:5.58:0,6,29	0/0:32,1:9:9.53:0,10,160	0/1:9,24:33:5.86:455,0,6	0/1:11,15:26:2.30:341,0,2	0/1:3,16:20:16.89:241,0,17	1/1:4,24:28:71.55:540,72,0	0/0:19,0:19:40.57:0,41,223	1/1:13,15:28:20.32:340,20,0	1/1:9,20:29:23.28:364,23,0	1/1:6,11:17:7.45:231,7,0	1/1:7,14:21:14.35:293,14,0	0/1:8,11:20:7.44:216,0,7	1/1:7,17:24:41.83:325,42,0	1/1:6,12:21:33.76:244,34,0	0/0:8,0:24:57.56:0,58,343	0/0:8,0:21:40.22:0,40,236	1/1:6,9:17:31.88:237,32,0	1/1:1,15:16:35.78:274,36,0	1/1:3,11:15:28.93:215,29,0	1/1:6,10:16:21.75:165,22,0	0/1:7,28:35:4.65:516,0,5	1/1:3,36:40:94.66:725,95,0	0/1:5,9:14:3.53:159,0,4	1/1:4,19:22:26.31:387,26,0	0/1:10,6:17:22.68:148,0,23	1/1:6,2:7:5.92:46,6,0
chr10	29435824	.	A	AG	1693.46	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-7.929;DP=645;FS=0.555;HRun=5;HaplotypeScore=66.1793;InbreedingCoeff=0.9834;MQ=69.67;MQ0=0;MQRankSum=0.383;QD=30.24;ReadPosRankSum=2.244;VQSLOD=4.3272;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:91.02:0,91,1100	0/0:12,0:12:33.08:0,33,354	0/0:17,0:14:29.85:0,30,295	0/0:18,0:18:37.63:0,38,384	0/0:26,0:26:66.13:0,66,690	0/0:23,0:23:48.09:0,48,505	0/0:27,0:27:78.20:0,78,837	0/0:20,0:20:48.11:0,48,509	0/0:38,0:38:88.29:0,88,1017	0/0:15,0:15:30.07:0,30,317	0/0:18,0:18:45.11:0,45,481	0/0:21,0:21:56.81:0,57,591	0/0:40,0:40:96.24:0,96,1030	0/0:27,0:27:78.18:0,78,827	0/0:35,0:35:99:0,99,1047	0/0:29,0:29:81.20:0,81,869	1/1:1,28:29:81.26:1066,81,0	1/1:3,24:27:57.19:749,57,0	0/0:18,0:18:51.13:0,51,545	0/0:19,0:19:39.09:0,39,414	0/0:26,0:26:69.15:0,69,732	0/0:17,0:17:42.09:0,42,439	0/0:16,0:16:33.08:0,33,354	0/0:19,0:19:48.12:0,48,516	0/0:22,0:22:51.09:0,51,527	0/0:22,0:22:57.14:0,57,613	0/0:14,0:14:36.09:0,36,387	0/0:4,0:4:12.03:0,12,129
chr10	29436074	.	T	TG	1425.68	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-8.848;DP=577;FS=0.000;HRun=6;HaplotypeScore=53.3045;InbreedingCoeff=0.9840;MQ=76.49;MQ0=0;MQRankSum=0.824;QD=27.42;ReadPosRankSum=1.349;VQSLOD=4.0453;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,108,1101	0/0:6,0:6:15.03:0,15,153	0/0:15,0:14:19.86:0,20,251	0/0:13,0:13:26.99:0,27,248	0/0:23,0:23:54.12:0,54,550	0/0:21,0:21:57.13:0,57,581	0/0:20,0:20:54.12:0,54,550	0/0:30,0:30:69.13:0,69,697	0/0:20,0:20:51.11:0,51,520	0/0:20,0:20:51.11:0,51,520	0/0:14,0:14:33.06:0,33,327	0/0:17,0:17:48.09:0,48,481	0/0:20,0:20:57.11:0,57,574	0/0:19,0:19:45.08:0,45,452	0/0:27,0:25:72.16:0,72,735	0/0:20,0:20:51.11:0,51,520	1/1:2,30:32:78.25:981,78,0	1/1:1,19:20:45.14:566,45,0	0/0:12,0:12:30.04:0,30,298	0/0:14,0:14:42.10:0,42,428	0/0:35,0:35:99:0,99,1002	0/0:17,0:18:38.11:0,38,371	0/0:15,0:15:36.08:0,36,367	0/0:29,0:29:84.19:0,84,857	0/0:22,0:22:57.13:0,57,581	0/0:29,0:28:78.17:0,78,796	0/0:20,0:20:51.11:0,51,520	0/0:7,0:7:18.04:0,18,183
chr10	29436893	.	TCACA	T	5147.80	PASS	AB=0.801;AC=37;AF=0.685;AN=54;BaseQRankSum=-2.487;DP=523;FS=0.000;HRun=0;HaplotypeScore=91.0022;InbreedingCoeff=0.6232;MQ=61.19;MQ0=8;MQRankSum=1.741;QD=14.71;ReadPosRankSum=3.138;VQSLOD=4.1491;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:38:16.03:0,16,285	1/1:2,5:7:12.04:190,12,0	./.	0/0:23,0:13:3.48:0,3,45	1/1:8,5:14:14.08:197,14,0	1/1:13,5:20:15.04:199,15,0	0/1:11,9:21:41.51:217,0,42	0/1:18,3:21:0.53:99,0,1	0/0:13,0:22:18.06:0,18,313	1/1:7,3:10:9.03:143,9,0	1/1:4,6:11:18.04:260,18,0	1/1:5,4:9:9.03:143,9,0	1/1:9,14:24:29.58:607,30,0	1/1:6,17:22:36.12:572,36,0	1/1:8,14:24:36.11:532,36,0	1/1:7,13:20:21.07:334,21,0	0/0:20,0:25:15.92:0,16,251	0/0:15,0:15:17.82:0,18,331	0/0:11,0:13:5.49:0,5,25	0/0:8,0:12:19.92:0,20,180	0/1:33,1:40:32.89:33,0,150	1/1:7,4:10:3.48:48,3,0	1/1:7,3:10:6.01:75,6,0	1/1:14,12:26:23.65:380,24,0	1/1:7,3:9:9.03:143,9,0	1/1:11,8:19:5.25:311,5,0	1/1:10,10:20:27.09:428,27,0	1/1:4,5:9:15.05:238,15,0
chr10	29438955	.	TCTTCTC	T	14472.93	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=0.207;DP=640;FS=9.429;HRun=0;HaplotypeScore=152.3601;InbreedingCoeff=0.6205;MQ=68.63;MQ0=6;MQRankSum=0.355;QD=24.61;ReadPosRankSum=2.381;VQSLOD=4.2984;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:13,19:32:26.98:382,27,0	1/1:5,2:7:18:278,18,0	0/0:23,0:19:3.01:0,3,42	0/0:29,0:24:1.54:0,2,18	1/1:11,22:33:56.84:690,57,0	1/1:16,8:24:51.16:891,51,0	1/1:26,2:28:26.96:343,27,0	1/1:32,0:28:18.01:195,18,0	1/1:13,0:19:26.85:262,27,0	1/1:15,17:32:45.03:758,45,0	1/1:9,3:12:30.01:518,30,0	1/1:20,3:23:33.04:537,33,0	1/1:17,12:29:54.09:954,54,0	1/1:13,6:19:30.04:470,30,0	1/1:16,7:23:42.14:838,42,0	1/1:16,13:29:63.06:1054,63,0	1/1:24,4:27:30.04:429,30,0	1/1:3,2:5:3.01:41,3,0	1/1:20,2:21:29.42:525,29,0	1/1:7,15:21:45.11:836,45,0	1/1:10,10:20:14.91:130,15,0	1/1:4,22:26:45.08:742,45,0	1/1:4,12:16:21.03:386,21,0	1/1:8,10:18:6.02:92,6,0	1/1:3,15:18:33.07:527,33,0	1/1:14,22:36:69.22:1325,69,0	1/1:17,7:23:48.04:849,48,0	1/1:5,6:11:21.07:422,21,0
chr10	29439025	.	TTGCTTC	T	18983.13	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=0.318;DP=538;FS=3.578;HRun=0;HaplotypeScore=167.6493;InbreedingCoeff=0.8588;MQ=49.11;MQ0=2;MQRankSum=-5.757;QD=40.22;ReadPosRankSum=6.498;VQSLOD=4.5004;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,9:11:24.08:523,24,0	1/1:2,9:11:24.08:512,24,0	0/0:39,0:24:47.13:0,47,1037	0/0:25,0:21:37.63:0,38,854	1/1:10,12:22:32.94:512,33,0	1/1:6,21:27:60.12:1216,60,0	1/1:4,18:22:27.05:543,27,0	1/1:7,16:23:45.14:900,45,0	1/1:2,13:15:39.07:797,39,0	1/1:12,9:21:45.08:889,45,0	1/1:3,15:18:23.95:387,24,0	1/1:4,16:20:48.11:994,48,0	1/1:5,20:25:56.84:1150,57,0	1/1:2,11:13:33.08:665,33,0	1/1:4,18:22:48.09:993,48,0	1/1:7,19:26:57.20:1232,57,0	1/1:8,9:16:30.40:515,30,0	1/1:2,3:5:11.99:215,12,0	1/1:4,12:16:36.10:696,36,0	1/1:11,12:23:47.96:890,48,0	1/1:7,1:8:3.01:59,3,0	1/1:15,11:26:65.92:1125,66,0	1/1:5,8:13:18.06:367,18,0	1/1:9,0:9:6.90:119,7,0	1/1:3,11:14:36.05:706,36,0	1/1:17,18:35:78.16:1554,78,0	1/1:5,14:19:42.11:857,42,0	1/1:6,5:11:30.02:564,30,0
chr10	29439108	.	TTCC	T	635.79	PASS	AB=0.988;AC=23;AF=0.460;AN=50;BaseQRankSum=-2.832;DP=662;FS=2.602;HRun=0;HaplotypeScore=107.6712;InbreedingCoeff=-0.3080;MQ=34.98;MQ0=148;MQRankSum=-11.211;QD=1.30;ReadPosRankSum=-1.616;VQSLOD=2.0880;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:14:11.69:72,0,12	0/1:9,0:9:13.59:14,0,46	./.	./.	0/1:19,0:18:12.62:13,0,58	0/1:33,1:30:55.35:55,0,176	0/1:29,0:22:34.68:35,0,37	1/1:22,0:11:13.02:33,13,0	1/1:22,0:18:25.34:125,25,0	0/0:41,0:34:3.52:0,4,386	0/1:15,0:13:3.20:3,0,67	0/1:27,0:19:15.42:15,0,108	0/0:28,0:25:20.23:0,20,258	0/1:15,0:11:1.94:2,0,58	0/1:32,1:29:22.29:22,0,222	0/1:24,0:23:23.86:24,0,101	1/1:26,0:14:22.33:145,22,0	./.	0/0:22,0:12:14.40:0,14,182	0/1:30,0:25:47.39:47,0,163	0/1:21,0:13:3.69:4,0,41	0/0:35,0:30:9.69:0,10,279	0/1:21,1:20:34.88:35,0,101	0/0:28,1:20:34.86:0,35,290	0/1:32,2:27:50.05:50,0,123	0/1:35,0:27:59.43:59,0,252	0/1:22,1:20:29.05:29,0,180	0/1:19,0:9:7.33:7,0,27
chr10	29439857	.	CA	C	650.69	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.037;DP=551;FS=3.471;HRun=9;HaplotypeScore=53.2779;InbreedingCoeff=0.8984;MQ=83.18;MQ0=0;MQRankSum=-3.390;QD=19.14;ReadPosRankSum=1.859;VQSLOD=4.1811;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:54.14:0,54,612	0/0:10,0:10:27.06:0,27,295	0/0:22,0:22:47.40:0,47,473	0/0:14,0:14:17.41:0,17,177	0/0:24,0:24:66.19:0,66,753	0/0:20,0:20:60.18:0,60,692	0/0:19,0:19:51.13:0,51,569	0/0:21,0:23:62.99:0,63,694	0/0:26,0:26:72.21:0,72,831	0/0:35,0:35:96.28:0,96,1101	0/0:23,0:23:63.19:0,63,727	0/0:14,0:14:39.12:0,39,450	0/0:18,0:18:51.11:0,51,574	0/0:17,0:17:45.13:0,45,519	0/0:20,0:20:57.17:0,57,658	0/0:25,0:25:60.17:0,60,682	1/1:1,26:27:69.04:632,69,0	1/1:2,5:7:15.01:137,15,0	0/0:12,0:12:30.07:0,30,328	0/0:24,0:24:64.42:0,64,715	0/0:14,0:14:30.09:0,30,346	0/0:21,0:22:56.99:0,57,629	0/0:18,1:19:29.70:0,30,593	0/0:16,0:16:48.14:0,48,554	0/0:12,1:13:2.62:0,3,284	0/0:25,0:25:60.17:0,60,683	0/0:25,0:24:72.19:0,72,812	0/0:16,0:16:48.14:0,48,554
chr10	29440076	.	TA	T	9496.50	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-6.521;DP=557;FS=1.275;HRun=11;HaplotypeScore=62.4008;InbreedingCoeff=0.8938;MQ=73.13;MQ0=1;MQRankSum=-1.968;QD=19.26;ReadPosRankSum=3.087;VQSLOD=5.9467;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,0:21:30.55:88,31,0	1/1:1,7:8:17.88:148,18,0	0/0:15,0:14:2.34:0,2,205	0/0:11,0:12:9.50:0,10,137	1/1:3,34:37:92.86:763,93,0	1/1:1,16:17:44.95:369,45,0	1/1:1,14:15:41.95:345,42,0	1/1:7,16:23:26.80:364,27,0	1/1:1,8:9:23.97:197,24,0	1/1:6,23:29:65.87:537,66,0	1/1:6,23:30:67.93:548,68,0	1/1:3,9:12:26.96:222,27,0	1/1:3,16:19:44.94:369,45,0	1/1:0,12:13:38:301,38,0	1/1:2,22:25:61.97:499,62,0	1/1:3,21:24:56.93:468,57,0	0/0:1,0:22:45.65:0,46,238	0/0:2,0:15:25.48:0,25,134	1/1:2,18:20:24.95:411,25,0	1/1:4,30:34:83.36:674,83,0	1/1:0,7:7:20.98:172,21,0	1/1:1,20:22:52.96:425,53,0	1/1:4,21:25:59.93:493,60,0	1/1:2,22:25:45.23:479,45,0	1/1:1,21:22:59.93:493,60,0	1/1:5,25:30:74.90:615,75,0	1/1:1,20:21:56.93:468,57,0	1/1:3,2:5:5.98:49,6,0
chr10	29441337	.	AC	A	356.73	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-2.328;DP=522;FS=3.593;HRun=1;HaplotypeScore=75.5589;InbreedingCoeff=0.7721;MQ=41.38;MQ0=53;MQRankSum=1.482;QD=7.13;ReadPosRankSum=-0.134;VQSLOD=0.5520;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:1:2.04:6,2,0	0/0:11,0:10:23.81:0,24,139	0/0:26,1:7:12.45:0,12,132	0/0:15,0:3:2.94:0,3,18	0/0:22,0:19:34.75:0,35,192	0/0:24,0:23:22.55:0,23,115	0/0:12,0:8:14.20:0,14,70	0/0:25,0:17:51.68:0,52,266	0/0:3,0:2:0.89:0,1,2	0/0:21,0:16:36.31:0,36,228	0/0:18,0:15:37.56:0,38,180	0/0:23,0:19:28.55:0,29,184	0/0:20,0:17:25.85:0,26,140	0/0:22,0:20:36.71:0,37,200	0/0:19,0:18:29.95:0,30,188	0/0:19,0:16:28.33:0,28,168	1/1:17,8:12:21.07:284,21,0	1/1:5,9:9:15.04:188,15,0	0/0:14,0:11:31.64:0,32,187	0/0:28,0:17:43.05:0,43,235	0/0:19,0:19:40.67:0,41,259	0/0:19,0:18:39.80:0,40,202	0/0:18,0:16:31.47:0,31,150	0/0:25,0:24:57.84:0,58,358	0/0:15,0:14:28.05:0,28,163	0/0:26,0:23:53.81:0,54,333	0/0:22,0:20:29.11:0,29,150	0/0:5,0:4:5.72:0,6,29
chr10	29442593	.	GT	G	148.46	PASS	AB=1.000;AC=11;AF=0.917;AN=12;BaseQRankSum=0.747;DP=32;FS=6.021;HRun=1;HaplotypeScore=13.7220;MQ=65.43;MQ0=1;MQRankSum=-0.747;QD=8.25;ReadPosRankSum=0.747;VQSLOD=0.7252;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	1/1:0,1:1:3.01:36,3,0	0/1:6,0:3:9.73:10,0,20	./.	1/1:0,3:1:3.01:36,3,0	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	1/1:0,3:1:3.01:34,3,0	1/1:0,4:2:6.02:71,6,0	./.	./.	./.	./.	./.	./.	1/1:0,1:1:3.01:36,3,0	./.
chr10	29442757	.	T	TAAA	5863.51	PASS	AB=1.000;AC=47;AF=0.870;AN=54;BaseQRankSum=-4.697;DP=286;FS=9.739;HRun=12;HaplotypeScore=62.7661;InbreedingCoeff=0.5995;MQ=57.40;MQ0=9;MQRankSum=-0.561;QD=26.53;ReadPosRankSum=-0.420;VQSLOD=2.8324;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:2,0:12:34.65:0,35,194	1/1:0,2:2:3.01:55,3,0	0/1:36,0:11:22.85:23,0,85	0/0:48,0:16:18.91:0,19,128	1/1:7,4:12:30.04:398,30,0	1/1:1,3:6:18.01:249,18,0	1/1:5,0:5:11.95:134,12,0	1/1:12,3:15:29.26:388,29,0	0/0:0,0:3:8.72:0,9,49	1/1:8,2:9:17.90:228,18,0	1/1:6,1:9:21.06:279,21,0	1/1:5,0:5:8.99:112,9,0	1/1:3,0:3:6.02:93,6,0	1/1:2,2:5:11.61:143,12,0	1/1:6,6:12:33.07:486,33,0	1/1:3,3:6:9.03:165,9,0	1/1:7,1:9:16.59:255,17,0	1/1:1,0:1:0.47:1,0,0	1/1:12,4:14:20.65:319,21,0	1/1:3,5:9:23.96:338,24,0	1/1:1,1:2:6.02:95,6,0	./.	1/1:1,1:2:6.02:95,6,0	1/1:3,0:3:2.97:20,3,0	1/1:5,5:12:32.97:476,33,0	1/1:9,7:16:44.31:618,44,0	1/1:8,5:14:30.08:470,30,0	1/1:3,6:9:24.08:422,24,0
chr10	29442766	.	A	AAAG	2368.58	PASS	AB=0.999;AC=30;AF=0.556;AN=54;BaseQRankSum=-1.299;DP=323;FS=28.126;HRun=0;HaplotypeScore=84.0789;InbreedingCoeff=-0.2623;MQ=62.70;MQ0=10;MQRankSum=-2.123;QD=9.95;ReadPosRankSum=7.274;VQSLOD=1.4064;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:14:41.80:0,42,338	1/1:2,0:2:3:27,3,0	0/1:41,0:13:4.81:5,0,140	0/0:63,0:24:25.06:0,25,216	0/1:14,0:14:45.26:136,0,45	1/1:6,0:6:12.03:112,12,0	1/1:5,0:5:4.75:46,5,0	0/1:15,0:15:90.86:134,0,91	0/0:3,0:3:9:0,9,79	0/1:12,0:10:27.88:69,0,28	0/1:9,0:9:27.42:78,0,27	0/1:4,0:4:26.07:26,0,31	0/1:4,0:4:17.65:43,0,18	0/1:6,0:6:17.08:51,0,17	0/1:14,0:13:13.98:188,0,14	0/1:6,0:6:15.49:86,0,15	1/1:6,4:11:12.16:318,12,0	1/1:4,0:4:8.98:72,9,0	0/1:18,0:16:74.37:74,0,176	0/1:11,0:11:10.89:141,0,11	0/1:4,0:4:17.80:32,0,18	./.	1/1:2,0:2:5.81:48,6,0	0/0:3,0:3:3.49:0,3,25	0/1:13,0:13:33.67:172,0,34	0/1:17,0:17:36.16:238,0,36	0/1:11,0:11:9.72:201,0,10	1/1:8,0:8:23.96:233,24,0
chr10	29442768	.	AAG	A	755.96	PASS	AB=0.928;AC=17;AF=0.315;AN=54;BaseQRankSum=-4.018;DP=321;FS=5.025;HRun=0;HaplotypeScore=79.7561;InbreedingCoeff=-0.4275;MQ=63.07;MQ0=8;MQRankSum=-1.086;QD=3.92;ReadPosRankSum=-3.403;VQSLOD=0.1955;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:14:39.15:0,39,192	0/0:2,0:2:5.97:0,6,46	0/1:43,0:14:23.77:24,0,143	0/0:58,0:23:20.01:0,20,205	0/1:12,2:14:99:118,0,141	0/1:6,0:6:4.38:4,0,95	0/1:4,1:5:10.66:92,0,11	0/1:11,4:15:91.78:209,0,92	0/1:4,0:4:8.48:8,0,16	0/1:11,0:9:48.30:48,0,134	0/1:10,0:10:82.05:87,0,82	0/1:4,0:4:13.18:13,0,50	0/0:3,1:4:8.14:0,8,48	0/0:5,0:5:4.50:0,4,72	0/1:12,2:13:57.14:57,0,180	0/0:5,0:5:11.83:0,12,95	0/0:11,0:11:15.74:0,16,220	0/0:4,0:4:7.01:0,7,70	0/1:20,0:18:39.37:39,0,254	0/0:10,0:10:13.13:0,13,173	0/1:3,1:4:31.10:31,0,41	./.	0/1:1,1:2:6.26:34,0,6	0/1:2,0:3:0.06:0,0,19	0/1:13,0:13:42.70:43,0,183	0/1:16,1:17:77.20:77,0,255	0/0:11,0:11:5.38:0,5,179	0/1:8,0:8:15.46:15,0,151
chr10	29442799	.	TA	T	1200.38	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=1.787;DP=365;FS=1.569;HRun=9;HaplotypeScore=85.0274;InbreedingCoeff=0.8558;MQ=74.09;MQ0=2;MQRankSum=-5.975;QD=18.47;ReadPosRankSum=1.868;VQSLOD=3.9364;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:16:27.03:0,27,288	0/0:2,0:2:6.02:0,6,69	0/0:47,0:20:7.11:0,7,318	0/0:55,0:25:29.28:0,29,249	0/0:14,1:15:8.50:0,9,334	0/0:7,0:7:18.05:0,18,207	0/0:5,0:5:12.04:0,12,138	0/0:18,0:18:48.14:0,48,553	0/0:4,0:4:9.03:0,9,104	0/0:11,0:12:32.93:0,33,360	0/0:9,0:9:27.03:0,27,289	0/0:3,0:3:9.03:0,9,104	0/0:6,0:6:18.04:0,18,191	0/0:8,0:8:23.81:0,24,254	0/0:14,0:13:30.09:0,30,345	0/0:7,0:7:18.05:0,18,208	1/1:4,9:13:29.99:268,30,0	1/1:0,5:5:12:110,12,0	0/0:22,1:22:16.59:0,17,463	0/0:15,0:15:39.08:0,39,433	0/0:9,0:9:15.92:0,16,166	0/0:2,0:2:6.02:0,6,69	0/0:7,0:7:18.04:0,18,198	0/0:4,0:4:9.48:0,9,93	0/0:11,0:11:27.94:0,28,298	1/1:5,17:22:27.47:488,27,0	1/1:5,10:15:41.93:366,42,0	1/1:5,5:10:14.98:137,15,0
chr10	29442808	.	AG	A	309.43	PASS	AB=0.963;AC=6;AF=0.107;AN=56;BaseQRankSum=6.142;DP=368;FS=4.368;HRun=1;HaplotypeScore=85.9393;InbreedingCoeff=0.0751;MQ=71.30;MQ0=4;MQRankSum=-5.631;QD=4.62;ReadPosRankSum=2.197;VQSLOD=0.7458;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:13:13.47:0,13,318	0/0:2,0:2:6.02:0,6,83	0/0:46,0:18:28.24:0,28,427	0/0:48,0:21:6.25:0,6,239	0/0:16,0:16:36.77:0,37,452	0/0:8,0:8:21.02:0,21,240	0/0:6,0:6:14.08:0,14,181	0/0:21,0:21:57.08:0,57,726	0/0:4,0:4:12.03:0,12,150	0/0:13,0:13:38.95:0,39,455	0/0:9,0:9:23.66:0,24,301	0/0:4,0:4:12.03:0,12,144	0/0:7,0:7:20.08:0,20,208	0/0:8,0:8:19.79:0,20,263	0/0:13,0:12:30.07:0,30,395	0/0:9,0:9:20.93:0,21,252	1/1:11,2:13:1.60:104,2,0	0/1:7,0:7:19.77:20,0,22	0/0:22,1:22:39.64:0,40,626	0/0:16,0:16:41.76:0,42,484	0/0:10,0:10:12.53:0,13,207	0/0:2,0:2:6.02:0,6,84	0/0:7,0:7:18.06:0,18,249	0/0:4,0:4:6.32:0,6,95	0/0:10,0:10:20.49:0,20,309	0/1:21,1:22:18.92:138,0,19	0/1:15,2:17:27.31:148,0,27	0/1:8,0:8:16.58:17,0,21
chr10	29442813	.	TCAA	T	600.77	PASS	AB=0.946;AC=21;AF=0.375;AN=56;BaseQRankSum=0.908;DP=359;FS=39.821;HRun=0;HaplotypeScore=93.3135;InbreedingCoeff=-0.2135;MQ=72.10;MQ0=4;MQRankSum=-2.308;QD=3.21;ReadPosRankSum=3.599;VQSLOD=0.0847;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:12:29.99:0,30,327	0/0:2,0:2:5.78:0,6,31	0/0:48,0:20:25.34:0,25,346	0/0:42,0:17:13.97:0,14,145	0/1:16,0:16:20.29:20,0,139	0/0:8,0:8:4.16:0,4,105	1/1:6,0:6:14.73:67,15,0	0/0:21,0:21:11.20:0,11,291	0/0:4,0:4:12.03:0,12,207	0/0:13,0:13:1.41:0,1,118	0/1:8,0:8:13.37:13,0,53	0/1:4,0:4:13.93:14,0,38	0/1:6,1:7:22.31:22,0,67	0/1:6,2:8:35.92:36,0,134	0/1:12,0:11:0.19:0,0,85	0/1:9,0:9:24.91:25,0,70	0/1:10,2:13:57.92:58,0,188	0/0:6,0:7:7.40:0,7,156	0/1:18,2:21:99:177,0,123	0/0:15,0:15:16.71:0,17,208	0/1:9,1:10:5.89:111,0,6	1/1:3,0:3:2.80:9,3,0	0/1:7,0:7:17.15:17,0,27	1/1:4,0:4:5.78:32,6,0	0/1:10,0:10:14.63:15,0,52	0/1:24,0:24:32.61:33,0,215	0/1:15,1:16:85.45:85,0,105	0/1:8,0:8:25.21:25,0,91
chr10	29442814	.	CAAA	C	2813.69	PASS	AB=0.759;AC=36;AF=0.643;AN=56;BaseQRankSum=-4.493;DP=358;FS=1.446;HRun=17;HaplotypeScore=86.3736;InbreedingCoeff=0.2423;MQ=72.14;MQ0=4;MQRankSum=-0.119;QD=11.63;ReadPosRankSum=2.630;VQSLOD=0.7813;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:32.77:0,33,409	0/0:2,0:2:0:0,0,0	0/0:45,0:20:13.94:0,14,166	0/0:39,0:17:9.06:0,9,57	0/1:9,6:16:6.62:147,0,7	0/1:6,2:8:11.04:52,0,11	1/1:0,6:6:18.04:185,18,0	1/1:14,6:21:8.04:158,8,0	0/0:4,0:4:9.02:0,9,122	1/1:6,5:13:17.55:158,18,0	1/1:3,4:8:7.49:96,7,0	0/1:2,2:4:1.01:53,0,1	1/1:6,1:7:7.58:66,8,0	0/1:7,1:8:44.98:51,0,45	1/1:6,5:11:14.53:127,15,0	0/1:4,5:9:12.03:132,0,12	0/1:13,0:13:44.75:45,0,57	0/0:4,0:7:10.60:0,11,56	1/1:9,9:19:43.11:403,43,0	0/1:9,5:15:71.46:98,0,71	1/1:3,6:10:23.91:231,24,0	1/1:0,3:3:3.67:58,4,0	1/1:2,5:7:11.88:123,12,0	1/1:1,3:4:7.29:89,7,0	1/1:6,3:10:1.28:105,1,0	1/1:13,9:24:11.32:272,11,0	1/1:8,7:16:5.07:233,5,0	0/1:4,4:8:17.72:105,0,18
chr10	29443426	.	TCCCTACGCGTGTGCACGTGTGCGCATGTG	T	1637.93	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.808;DP=713;FS=3.169;HRun=0;HaplotypeScore=495.3344;InbreedingCoeff=0.9819;MQ=82.78;MQ0=0;MQRankSum=-4.844;QD=74.45;ReadPosRankSum=1.584;VQSLOD=1.0834;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:11,11:22:24.08:1731,24,0	0/0:10,0:10:30.10:0,30,3533	0/0:22,0:21:57.18:0,57,2330	0/0:26,0:26:69.19:0,69,2508	0/0:26,0:26:75.25:0,75,7784	0/0:19,0:19:57.18:0,57,6062	0/0:24,0:24:66.70:0,67,6665	0/0:34,0:34:96.32:0,96,7248	0/0:21,0:21:60.21:0,60,5906	0/0:31,0:31:93.31:0,93,10274	0/0:21,0:21:63.20:0,63,6732	0/0:31,0:31:93.28:0,93,8840	0/0:20,0:20:60.21:0,60,6461	0/0:34,0:34:99:0,102,10931	0/0:25,0:25:75.25:0,75,7648	0/0:22,0:22:66.23:0,66,6719	0/0:20,0:20:60.21:0,60,6300	0/0:6,0:6:15.05:0,15,1683	0/0:19,0:19:57.18:0,57,3936	0/0:29,0:29:84.27:0,84,9124	0/0:62,0:62:99:0,187,19001	0/0:28,0:28:78.21:0,78,6906	0/0:30,0:30:87.28:0,87,7881	0/0:35,0:35:99:0,102,9441	0/0:31,0:31:90.29:0,90,10301	0/0:28,0:28:81.27:0,81,9424	0/0:24,0:24:69.24:0,69,6436	0/0:13,0:13:39.13:0,39,5037
chr10	29443886	.	T	TA	1140.35	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.797;DP=623;FS=1.967;HRun=10;HaplotypeScore=66.7152;InbreedingCoeff=0.9539;MQ=75.12;MQ0=0;MQRankSum=-1.102;QD=21.52;ReadPosRankSum=1.436;VQSLOD=4.7202;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:56.90:0,57,465	0/0:5,0:5:8.97:0,9,74	0/0:21,0:18:25.18:0,25,217	0/0:17,0:15:11.90:0,12,131	0/0:32,0:32:95.80:0,96,778	0/0:28,0:28:71.86:0,72,584	0/0:25,0:25:65.81:0,66,531	0/0:28,0:28:38.55:0,39,438	0/0:18,0:18:44.89:0,45,363	0/0:29,0:29:77.88:0,78,638	0/0:33,0:33:65.88:0,66,542	0/0:18,0:18:41.93:0,42,345	0/0:22,0:22:62.90:0,63,512	0/0:17,0:17:38.92:0,39,317	0/0:16,0:16:35.95:0,36,296	0/0:18,0:18:47.93:0,48,394	1/1:2,28:30:71.96:768,72,0	1/1:6,16:23:47.99:494,48,0	0/0:23,0:24:55.94:0,56,442	0/0:22,0:22:50.91:0,51,416	0/0:15,0:15:35.95:0,36,296	0/0:17,0:17:41.92:0,42,342	0/0:31,0:31:71.87:0,72,588	0/0:24,0:24:62.91:0,63,515	0/0:23,0:23:53.91:0,54,443	0/0:26,1:27:48.86:0,49,429	0/0:23,0:22:56.85:0,57,457	0/0:11,0:11:29.95:0,30,246
chr10	29448022	.	TAGA	T	1520.83	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.788;DP=755;FS=5.408;HRun=0;HaplotypeScore=105.1253;InbreedingCoeff=0.9999;MQ=86.59;MQ0=0;MQRankSum=-2.563;QD=42.25;ReadPosRankSum=1.891;VQSLOD=5.1152;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,116,2445	0/0:18,0:18:51.18:0,51,1138	0/0:21,0:21:63.03:0,63,1175	0/0:30,0:30:84.04:0,84,1515	0/0:19,0:19:57.20:0,57,1244	0/0:23,0:23:66.23:0,66,1456	0/0:34,0:34:99:0,99,2138	0/0:37,0:37:99:0,99,2124	1/1:0,36:36:99:1616,99,0	0/0:24,0:24:72.25:0,72,1565	0/0:12,0:12:36.12:0,36,787	0/0:27,0:27:81.28:0,81,1782	0/0:28,0:28:78.27:0,78,1737	0/0:26,0:26:78.27:0,78,1706	0/0:25,0:25:72.25:0,72,1572	0/0:38,0:38:99:0,111,2463	0/0:25,0:25:75.26:0,75,1654	0/0:23,0:23:69.24:0,69,1500	0/0:19,0:19:48.16:0,48,1041	0/0:30,0:30:87.30:0,87,1866	0/0:39,0:39:99:0,117,2556	0/0:26,0:26:75.26:0,75,1622	0/0:22,0:22:54.19:0,54,1191	0/0:28,0:28:81.28:0,81,1790	0/0:22,0:21:66.23:0,66,1460	0/0:43,0:43:99:0,126,2719	0/0:23,0:23:66.23:0,66,1417	0/0:18,0:18:54.19:0,54,1206
chr10	29450241	.	GCACACACACACACACA	G	614.54	PASS	AB=0.940;AC=13;AF=0.271;AN=48;BaseQRankSum=2.078;DP=479;FS=9.947;HRun=0;HaplotypeScore=182.3035;InbreedingCoeff=0.2398;MQ=57.08;MQ0=19;MQRankSum=-0.313;QD=3.32;ReadPosRankSum=0.615;VQSLOD=2.2408;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:35,0:33:3.01:76,3,0	./.	./.	./.	0/0:12,0:11:6.02:0,6,134	0/0:12,0:12:8.04:0,8,80	0/1:31,0:30:13.55:14,0,34	0/0:16,0:16:11.39:0,11,84	1/1:15,0:15:1.50:109,2,0	0/0:13,0:13:2.97:0,3,20	0/0:10,0:9:3.01:0,3,43	0/0:20,0:19:6.48:0,6,62	1/1:8,0:9:3.01:72,3,0	0/0:17,0:17:0:0,0,0	0/0:10,0:9:3.01:0,3,76	0/1:17,0:16:13.21:19,0,13	1/1:32,2:32:4.87:182,5,0	0/1:25,7:32:46.06:251,0,46	0/0:21,0:19:7.71:0,8,89	./.	0/0:25,0:23:9:0,9,200	0/0:10,0:9:3.01:0,3,41	0/0:11,0:10:2.99:0,3,23	0/0:29,0:26:0:0,0,1	0/0:15,0:16:15.77:0,16,196	0/0:20,0:19:13.43:0,13,118	0/0:11,0:11:2.99:0,3,24	1/1:10,0:9:2.96:20,3,0
chr10	29450307	.	CAG	C	8095.91	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=2.583;DP=423;FS=2.502;HRun=0;HaplotypeScore=80.8388;InbreedingCoeff=0.9093;MQ=58.38;MQ0=7;MQRankSum=0.568;QD=25.70;ReadPosRankSum=-1.078;VQSLOD=4.8735;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:31,0:30:41.02:221,41,0	1/1:0,7:7:12.04:162,12,0	0/0:16,0:5:15.02:0,15,229	0/0:24,0:17:22.42:0,22,632	1/1:3,6:8:12.04:176,12,0	1/1:1,12:13:18.01:239,18,0	1/1:6,10:16:29.79:390,30,0	1/1:0,12:12:35.94:479,36,0	0/0:14,0:14:31.61:0,32,168	1/1:0,10:10:27.08:378,27,0	1/1:2,2:3:3.01:44,3,0	1/1:1,20:20:39.13:572,39,0	1/1:0,15:16:39.13:563,39,0	1/1:1,14:15:23.94:344,24,0	1/1:0,9:9:15.05:221,15,0	1/1:1,16:16:36.12:528,36,0	0/0:30,0:30:78.17:0,78,1336	0/0:24,0:24:60.18:0,60,1030	1/1:2,12:13:35.95:417,36,0	1/1:0,7:7:18.06:265,18,0	1/1:2,24:26:20.30:527,20,0	1/1:2,9:11:17.41:262,17,0	1/1:1,7:8:15:220,15,0	1/1:1,26:27:51.16:748,51,0	1/1:1,12:13:29.99:441,30,0	1/1:4,16:20:42.13:591,42,0	1/1:0,5:5:12.04:176,12,0	1/1:1,3:4:9.03:132,9,0
chr10	29450309	.	GA	G	2854.17	PASS	AB=1.000;AC=45;AF=0.804;AN=56;BaseQRankSum=6.973;DP=435;FS=8.820;HRun=1;HaplotypeScore=100.4558;InbreedingCoeff=0.7595;MQ=60.34;MQ0=5;MQRankSum=1.481;QD=9.24;ReadPosRankSum=1.091;VQSLOD=0.7094;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:41.47:0,41,189	1/1:7,0:7:10.55:55,11,0	0/0:19,0:8:24.04:0,24,304	0/0:24,0:17:26.50:0,27,524	1/1:9,0:8:11.70:67,12,0	1/1:13,0:13:17.56:102,18,0	1/1:16,0:16:10.65:149,11,0	1/1:12,0:12:34.94:204,35,0	1/1:14,1:15:2.28:42,2,0	1/1:10,0:10:26.31:158,26,0	0/1:5,0:4:10.73:11,0,18	1/1:22,0:22:37.93:215,38,0	1/1:15,1:16:37.50:207,38,0	1/1:15,1:16:22.87:125,23,0	1/1:11,0:11:14.62:83,15,0	1/1:17,0:16:34.98:198,35,0	0/0:30,0:30:78.16:0,78,1056	0/0:23,0:23:60.17:0,60,828	1/1:14,0:13:25.97:172,26,0	1/1:11,0:11:0.32:91,0,0	1/1:28,0:28:20.21:199,20,0	1/1:9,2:11:20.79:113,21,0	1/1:7,1:8:15.07:84,15,0	1/1:27,1:28:32.99:262,33,0	1/1:13,0:13:12.84:147,13,0	1/1:17,0:18:40.01:233,40,0	1/1:5,0:5:11.68:66,12,0	1/1:4,0:4:8.77:50,9,0
chr10	29450310	.	AGG	A	3516.37	PASS	AB=0.982;AC=38;AF=0.679;AN=56;BaseQRankSum=7.651;DP=439;FS=1.675;HRun=8;HaplotypeScore=98.5634;InbreedingCoeff=0.3727;MQ=60.41;MQ0=4;MQRankSum=0.482;QD=10.72;ReadPosRankSum=2.380;VQSLOD=0.6854;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,29:30:44.35:545,44,0	1/1:7,0:7:11.59:76,12,0	0/0:19,0:8:14.23:0,14,266	0/0:24,0:17:12.37:0,12,546	1/1:9,0:8:11.77:73,12,0	0/1:13,0:13:1.21:81,0,1	0/1:16,0:16:0.58:122,0,1	1/1:13,0:13:8.08:143,8,0	0/0:3,0:15:26.98:0,27,92	1/1:10,0:10:23.51:160,24,0	0/1:5,1:5:9.18:9,0,45	0/1:22,0:22:9.69:201,0,10	1/1:16,0:16:38.33:249,38,0	1/1:16,0:16:23.39:148,23,0	0/1:11,0:11:31.33:65,0,31	1/1:16,0:16:35.36:232,35,0	0/0:30,0:30:75.21:0,75,1236	0/0:23,0:23:57.15:0,57,907	1/1:14,0:13:20.51:130,21,0	0/1:11,0:11:51.27:82,0,51	1/1:27,0:28:23.84:207,24,0	0/1:12,0:12:19.15:108,0,19	1/1:8,0:8:13.33:87,13,0	1/1:29,0:29:5.05:264,5,0	1/1:13,0:13:17.33:163,17,0	1/1:18,0:18:38.06:253,38,0	0/1:6,0:6:9.17:62,0,9	1/1:4,0:4:8.84:55,9,0
chr10	29464290	.	T	TTTGTTAC	3166.67	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.198;DP=698;FS=5.650;HRun=0;HaplotypeScore=171.0352;InbreedingCoeff=0.9584;MQ=89.87;MQ0=0;MQRankSum=-9.088;QD=105.56;ReadPosRankSum=0.756;VQSLOD=4.6348;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,15:16:48.15:1702,48,0	0/0:12,0:12:36.12:0,36,969	0/0:24,0:24:72.22:0,72,1832	0/0:29,0:29:76.92:0,77,1753	0/0:25,0:25:69.24:0,69,1915	0/0:23,0:23:66.23:0,66,1740	0/0:23,0:23:69.24:0,69,1915	0/0:41,0:41:99:0,123,3337	0/0:16,0:16:48.15:0,48,1268	0/0:34,0:34:99:0,102,2807	0/0:20,0:20:57.20:0,57,1560	0/0:38,0:38:99:0,114,3104	0/0:26,0:26:78.27:0,78,2143	0/0:23,0:23:66.23:0,66,1845	0/0:32,0:32:96.33:0,96,2531	0/0:25,0:25:75.26:0,75,2054	1/1:1,9:11:33.07:1232,33,0	1/1:0,3:3:9.03:370,9,0	0/0:25,0:25:72.24:0,72,1934	0/0:27,0:27:81.26:0,81,2172	0/0:49,0:49:99:0,144,3955	0/0:29,0:29:69.40:0,69,2250	0/0:29,0:29:87.26:0,87,2287	0/0:20,0:20:60.21:0,60,1677	0/0:31,0:31:93.29:0,93,2395	0/0:28,0:28:81.28:0,81,2197	0/0:36,0:35:99:0,105,2789	0/0:3,0:3:9.03:0,9,252
chr10	29464292	.	A	AG	1503.69	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=10.742;DP=712;FS=5.858;HRun=0;HaplotypeScore=99.8454;InbreedingCoeff=0.9767;MQ=89.51;MQ0=0;MQRankSum=-10.170;QD=33.42;ReadPosRankSum=-0.065;VQSLOD=2.8821;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,15:22:55.32:761,55,0	0/0:12,0:12:36.12:0,36,504	0/0:23,0:23:66.18:0,66,850	0/0:31,0:31:71.42:0,71,993	0/0:25,0:25:75.25:0,75,1048	0/0:23,0:23:66.22:0,66,922	0/0:25,0:25:72.22:0,72,975	0/0:40,0:40:99:0,120,1679	0/0:17,0:17:51.16:0,51,698	0/0:33,0:33:99:0,99,1369	0/0:20,0:20:60.18:0,60,808	0/0:37,0:37:99:0,111,1529	0/0:25,0:25:75.25:0,75,1049	0/0:24,0:24:69.23:0,69,964	0/0:31,0:31:93.30:0,93,1285	0/0:26,0:26:75.25:0,75,1048	1/1:6,10:16:45.15:623,45,0	1/1:4,3:7:18.06:261,18,0	0/0:26,0:26:75.24:0,75,1033	0/0:26,0:26:78.25:0,78,1074	0/0:48,0:48:99:0,141,1971	0/0:30,0:30:87.27:0,87,1199	0/0:28,0:28:84.27:0,84,1158	0/0:21,0:21:63.20:0,63,865	0/0:31,0:31:93.29:0,93,1270	0/0:26,0:26:78.26:0,78,1091	0/0:36,0:35:99:0,105,1468	0/0:3,0:3:9.03:0,9,126
chr10	29465018	.	GTATATATATATATATATA	G	17555.17	PASS	AB=1.000;AC=43;AF=0.896;AN=48;BaseQRankSum=-3.518;DP=457;FS=0.000;HRun=0;HaplotypeScore=229.2028;InbreedingCoeff=0.5966;MQ=41.21;MQ0=6;MQRankSum=-1.691;QD=42.82;ReadPosRankSum=2.183;VQSLOD=3.6669;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	1/1:2,6:7:3.01:150,3,0	./.	./.	1/1:5,19:24:12.04:521,12,0	1/1:7,10:17:21.07:1047,21,0	1/1:12,4:16:3.01:149,3,0	1/1:23,11:33:32.62:229,33,0	1/1:3,8:11:15.05:748,15,0	1/1:4,22:26:53.95:1953,54,0	1/1:2,10:13:15.05:724,15,0	1/1:10,14:24:18.06:896,18,0	1/1:4,16:20:24.08:1171,24,0	1/1:1,14:15:18.06:897,18,0	1/1:5,18:23:9.03:448,9,0	1/1:5,15:19:15.04:748,15,0	0/0:10,0:10:5.98:0,6,329	0/0:8,0:8:15.52:0,16,973	./.	1/1:2,25:27:27.09:1346,27,0	0/1:8,0:7:0:0,0,0	1/1:3,12:15:9.03:449,9,0	1/1:4,14:18:12.04:598,12,0	1/1:9,4:13:5.76:299,6,0	1/1:8,26:34:30.10:1495,30,0	1/1:4,20:24:57.19:2544,57,0	1/1:4,13:16:21.07:993,21,0	1/1:0,3:3:3.01:150,3,0
chr10	29465656	.	GATATATATATATATATATATATAT	G	18029.16	PASS	AB=0.684;AC=39;AF=0.848;AN=46;BaseQRankSum=5.924;DP=357;FS=1.778;HRun=0;HaplotypeScore=222.2297;InbreedingCoeff=0.5801;MQ=63.99;MQ0=0;MQRankSum=-4.290;QD=63.04;ReadPosRankSum=2.051;VQSLOD=3.8108;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	1/1:5,5:10:9.03:418,9,0	./.	0/0:14,0:5:3:0,3,25	1/1:13,13:26:33.02:1391,33,0	1/1:2,14:17:30.10:1687,30,0	1/1:4,0:4:2.99:24,3,0	1/1:25,0:25:9.02:123,9,0	0/1:7,0:13:55.55:442,0,56	1/1:12,11:23:33.11:1826,33,0	1/1:2,7:9:18.06:1077,18,0	1/1:5,6:11:15.05:834,15,0	1/1:5,5:10:9.03:572,9,0	1/1:1,7:8:15.05:855,15,0	1/1:4,7:12:18.06:1120,18,0	1/1:9,6:15:12.04:762,12,0	0/0:20,0:24:42.09:0,42,3257	0/0:9,0:10:24.08:0,24,1807	1/1:12,0:13:9.03:287,9,0	1/1:7,8:16:27.05:1198,27,0	./.	./.	1/1:8,6:14:5.83:312,6,0	./.	1/1:3,13:16:30.10:1687,30,0	1/1:11,7:20:30.09:1322,30,0	1/1:9,12:21:30.10:1905,30,0	1/1:2,1:3:3.01:186,3,0
chr10	29468247	.	G	GT	17982.23	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-9.822;DP=597;FS=13.632;HRun=1;HaplotypeScore=61.5188;InbreedingCoeff=0.9981;MQ=86.76;MQ0=0;MQRankSum=-5.384;QD=39.35;ReadPosRankSum=3.171;VQSLOD=4.3096;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:72.16:0,72,898	1/1:0,10:10:30.10:449,30,0	0/0:22,0:24:59.10:0,59,690	0/0:22,0:22:66.18:0,66,819	1/1:2,23:25:51.17:763,51,0	1/1:2,24:26:66.22:988,66,0	1/1:0,26:26:75.25:1124,75,0	1/1:4,28:32:84.27:1238,84,0	0/0:25,0:25:75.23:0,75,957	1/1:1,14:15:42.14:629,42,0	1/1:1,14:15:39.13:584,39,0	1/1:1,30:31:84.28:1256,84,0	1/1:0,17:17:42.14:629,42,0	1/1:0,30:31:90.30:1342,90,0	1/1:0,30:30:87.29:1304,87,0	1/1:0,29:30:87.29:1296,87,0	0/0:26,0:26:75.21:0,75,956	0/0:18,0:18:45.11:0,45,566	1/1:0,18:18:54.18:806,54,0	1/1:1,14:15:33.11:482,33,0	1/1:0,16:16:39.13:584,39,0	1/1:2,14:16:42.14:628,42,0	1/1:3,14:17:39.13:580,39,0	1/1:2,29:31:69.23:1034,69,0	1/1:0,19:19:51.17:763,51,0	1/1:1,12:13:36.11:514,36,0	1/1:1,17:18:48.16:719,48,0	1/1:0,6:6:18.06:270,18,0
chr10	29472991	.	AAAGG	A	23132.46	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=10.866;DP=755;FS=30.077;HRun=0;HaplotypeScore=134.5924;InbreedingCoeff=0.9774;MQ=68.79;MQ0=8;MQRankSum=-4.181;QD=41.68;ReadPosRankSum=6.850;VQSLOD=3.2117;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,99,2345	1/1:0,3:3:6.02:112,6,0	0/0:40,0:24:56.16:0,56,1117	0/0:62,0:36:47.16:0,47,1395	1/1:1,19:20:45.11:789,45,0	1/1:0,16:16:36.12:671,36,0	1/1:4,26:30:66.22:1209,66,0	1/1:0,24:24:69.20:1146,69,0	0/0:28,0:28:81.24:0,81,1961	1/1:1,32:33:93.24:1539,93,0	1/1:2,23:24:63.17:1111,63,0	1/1:2,24:26:57.20:1062,57,0	1/1:0,36:35:78.16:1393,78,0	1/1:0,29:28:66.23:1230,66,0	1/1:0,34:34:90.31:1677,90,0	1/1:1,40:41:19.33:1703,19,0	0/0:16,0:16:45.15:0,45,1156	0/0:15,0:15:42.14:0,42,1016	1/1:2,8:10:24.03:362,24,0	1/1:3,22:25:66.17:1191,66,0	1/1:0,19:19:41.92:668,42,0	1/1:1,25:26:65.90:1041,66,0	1/1:0,20:20:51.09:911,51,0	1/1:3,24:24:38.87:726,39,0	1/1:3,26:29:51.17:933,51,0	1/1:0,23:23:63.22:1138,63,0	1/1:2,30:32:63.16:1137,63,0	1/1:2,25:27:75.26:1384,75,0
chr10	29474536	.	G	GA	10395.32	PASS	AB=0.652;AC=44;AF=0.786;AN=56;BaseQRankSum=-9.839;DP=569;FS=3.888;HRun=10;HaplotypeScore=95.9732;InbreedingCoeff=0.8051;MQ=73.64;MQ0=2;MQRankSum=-0.324;QD=22.60;ReadPosRankSum=-0.010;VQSLOD=5.0206;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:42:76.77:0,77,245	1/1:4,7:12:23.81:236,24,0	0/0:17,0:18:21.24:0,21,165	0/0:13,0:11:16.03:0,16,110	1/1:6,21:28:19.71:597,20,0	1/1:5,11:19:47.59:442,48,0	0/1:7,4:11:3.66:150,0,4	1/1:7,15:22:45.11:473,45,0	1/1:2,16:18:45.07:466,45,0	1/1:10,21:31:71.88:727,72,0	1/1:4,11:15:36.09:381,36,0	1/1:13,7:20:35.98:338,36,0	1/1:8,7:15:33.06:335,33,0	1/1:3,11:14:12.76:280,13,0	1/1:7,22:29:72.16:751,72,0	1/1:4,20:24:63.14:658,63,0	0/0:3,0:12:18.54:0,19,53	0/0:7,0:21:34.18:0,34,99	1/1:9,14:23:51.08:520,51,0	0/1:3,9:12:13.21:277,0,13	1/1:13,8:22:32.85:434,33,0	1/1:6,11:17:14.62:340,15,0	1/1:8,20:27:50.50:714,50,0	1/1:4,14:18:45.07:468,45,0	1/1:7,11:17:39.10:416,39,0	1/1:14,17:31:24.09:619,24,0	1/1:11,12:24:50.76:505,51,0	1/1:2,7:9:27.01:268,27,0
chr10	29474571	.	G	GA	6315.77	PASS	AB=0.742;AC=45;AF=0.804;AN=56;BaseQRankSum=-3.249;DP=628;FS=5.565;HRun=14;HaplotypeScore=108.4706;InbreedingCoeff=0.0572;MQ=65.10;MQ0=5;MQRankSum=1.840;QD=10.89;ReadPosRankSum=0.307;VQSLOD=4.0302;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:48:58.90:0,59,170	1/1:7,5:12:30.21:237,30,0	0/1:27,0:14:14.02:22,0,14	0/1:29,0:14:12.94:13,0,13	1/1:23,8:33:17.84:345,18,0	0/1:11,9:20:37.63:195,0,38	0/1:5,8:14:3.79:172,0,4	1/1:12,4:16:26.88:216,27,0	1/1:14,0:16:23.88:128,24,0	1/1:12,10:22:32.99:288,33,0	1/1:8,13:21:21:185,21,0	1/1:5,10:18:16.31:232,16,0	1/1:10,5:17:19.25:248,19,0	1/1:5,5:12:17.68:134,18,0	1/1:9,17:28:21.71:331,22,0	1/1:7,10:19:47.65:388,48,0	1/1:5,13:18:35.99:314,36,0	0/1:14,11:28:18.30:342,0,18	1/1:15,8:23:22.98:269,23,0	1/1:8,17:26:28.32:333,28,0	1/1:13,8:23:19.36:262,19,0	0/1:7,6:15:2.21:125,0,2	1/1:12,12:26:25.25:313,25,0	0/1:12,11:24:2.81:201,0,3	0/1:6,15:21:0.31:269,0,0	0/1:21,9:31:60.57:249,0,61	1/1:12,15:28:31.50:377,31,0	1/1:7,3:10:14.99:129,15,0
chr10	29475016	.	TCA	T	2501.31	PASS	AB=0.821;AC=41;AF=0.759;AN=54;BaseQRankSum=0.707;DP=572;FS=23.390;HRun=0;HaplotypeScore=76.9079;InbreedingCoeff=0.0678;MQ=65.09;MQ0=16;MQRankSum=0.238;QD=5.34;ReadPosRankSum=-1.947;VQSLOD=0.7819;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:48,1:51:18.35:18,0,403	1/1:5,4:9:6.01:66,6,0	./.	0/0:29,0:22:2.92:0,3,17	1/1:7,1:9:2.56:33,3,0	1/1:10,4:14:8.85:80,9,0	1/1:22,0:21:11.85:103,12,0	0/0:27,0:25:2.13:0,2,5	0/0:12,0:15:5.99:0,6,50	0/1:18,6:24:27.32:116,0,27	1/1:9,0:10:3:33,3,0	1/1:6,10:16:21.06:230,21,0	1/1:8,10:21:23.21:202,23,0	1/1:9,6:15:13.59:136,14,0	0/1:13,11:22:11.72:188,0,12	1/1:10,8:18:14.63:165,15,0	1/1:22,2:21:7.38:97,7,0	1/1:10,12:23:26.88:268,27,0	1/1:12,3:14:6.01:66,6,0	1/1:3,4:7:6.01:66,6,0	1/1:27,7:34:8.85:80,9,0	0/1:13,4:17:13.88:58,0,14	1/1:10,4:14:9.02:99,9,0	0/1:19,15:35:8.83:297,0,9	1/1:15,4:20:6.01:66,6,0	0/1:25,1:27:9.10:99,0,9	1/1:8,2:9:8.79:70,9,0	0/1:5,0:6:8.23:8,0,10
chr10	29476157	.	T	TA	667.44	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=0.208;DP=763;FS=33.682;HRun=11;HaplotypeScore=123.2566;InbreedingCoeff=0.3421;MQ=70.57;MQ0=0;MQRankSum=-0.300;QD=11.92;ReadPosRankSum=0.712;VQSLOD=0.9019;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,34:44:0.24:729,0,0	0/0:11,0:11:32.87:0,33,255	0/0:6,0:7:7.20:0,7,49	0/1:12,0:12:24.44:27,0,24	0/0:36,0:39:87.71:0,88,659	0/0:24,0:25:67.74:0,68,512	0/0:33,0:34:87.79:0,88,672	0/0:35,0:39:75.94:0,76,553	0/0:21,1:23:19.37:0,19,324	0/0:42,0:43:94.58:0,95,724	0/0:27,0:27:34.64:0,35,415	0/0:28,0:30:71.91:0,72,541	0/0:29,0:31:53.51:0,54,533	0/0:27,0:29:70.71:0,71,534	0/0:36,0:37:97.62:0,98,742	0/0:37,0:38:94.19:0,94,704	0/0:19,0:20:55.83:0,56,424	0/0:21,0:21:44.79:0,45,346	0/0:24,0:27:62.82:0,63,454	0/0:25,1:28:42.32:0,42,486	0/0:28,0:31:83.75:0,84,614	0/0:24,1:25:32.26:0,32,433	0/0:27,0:29:55.40:0,55,423	0/0:29,2:35:30.94:0,31,566	0/0:21,0:21:59.76:0,60,464	0/0:26,0:26:71.70:0,72,552	0/0:24,0:26:54.81:0,55,405	0/0:3,0:4:11:0,11,76
chr10	29478716	.	TATAAAATAAAATAAAATAAAATAAA	T	2409.21	PASS	AB=0.867;AC=36;AF=0.818;AN=44;BaseQRankSum=-2.500;DP=314;FS=1.223;HRun=0;HaplotypeScore=169.7470;InbreedingCoeff=0.3579;MQ=75.11;MQ0=6;MQRankSum=2.517;QD=11.58;ReadPosRankSum=1.338;VQSLOD=2.5237;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:7,0:11:25.25:70,0,25	1/1:5,2:7:3.01:195,3,0	./.	0/0:31,0:10:4.78:0,5,25	1/1:12,0:12:3:25,3,0	1/1:10,0:10:9.03:123,9,0	1/1:6,0:6:3.01:41,3,0	1/1:36,0:36:35.83:455,36,0	0/1:10,0:10:0.27:0,0,4	./.	1/1:10,0:10:3.01:41,3,0	./.	./.	./.	1/1:4,0:4:3.01:40,3,0	1/1:9,0:9:6.02:82,6,0	0/0:7,0:10:12.03:0,12,225	0/0:12,0:20:18.05:0,18,389	1/1:9,7:16:21.01:401,21,0	1/1:13,0:13:6.02:75,6,0	1/1:7,0:7:6.02:106,6,0	./.	1/1:8,0:8:6.02:118,6,0	1/1:6,0:6:3.01:40,3,0	1/1:14,0:14:9.03:123,9,0	1/1:11,0:11:12.04:216,12,0	1/1:7,5:12:3.01:195,3,0	1/1:4,1:5:3.01:195,3,0
chr10	29478743	.	T	TA	1346.51	PASS	AB=0.773;AC=21;AF=0.438;AN=48;BaseQRankSum=-5.141;DP=212;FS=1.675;HRun=4;HaplotypeScore=33.7514;InbreedingCoeff=0.0590;MQ=41.75;MQ0=28;MQRankSum=4.103;QD=17.26;ReadPosRankSum=2.262;VQSLOD=2.6501;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:7:6.80:0,7,72	0/0:3,0:3:1.82:0,2,5	./.	0/0:59,2:6:11.12:0,11,68	1/1:3,0:3:4.24:28,4,0	0/1:6,3:9:53.26:105,0,53	1/1:0,1:1:3.01:41,3,0	1/1:7,13:19:39.10:497,39,0	0/1:3,0:3:0.16:0,0,4	0/0:2,0:2:3:0,3,27	0/1:3,1:4:24.17:35,0,24	0/0:1,0:1:2.96:0,3,19	./.	./.	0/1:3,0:3:31.36:31,0,46	1/1:0,2:2:6.02:82,6,0	0/0:9,0:8:17.79:0,18,179	0/0:20,0:20:35.83:0,36,375	0/1:11,0:10:28.46:161,0,28	0/1:1,2:3:18.05:66,0,18	0/1:1,2:3:17.23:71,0,17	./.	0/1:1,3:4:23:73,0,23	1/1:1,0:1:3.01:40,3,0	0/1:3,4:6:67.77:105,0,68	1/1:0,4:4:12.04:162,12,0	0/0:7,0:7:4.81:0,5,29	0/0:5,0:5:10.81:0,11,87
chr10	29484365	.	GCA	G	2984.77	PASS	AB=1.000;AC=49;AF=0.907;AN=54;BaseQRankSum=-5.227;DP=401;FS=11.994;HRun=0;HaplotypeScore=106.0470;InbreedingCoeff=0.3569;MQ=66.98;MQ0=26;MQRankSum=-0.262;QD=7.79;ReadPosRankSum=-1.784;VQSLOD=2.3579;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:31,4:32:47.03:546,47,0	./.	0/0:11,0:7:9.92:0,10,105	0/1:19,0:14:21.05:21,0,36	1/1:12,0:11:14.98:124,15,0	1/1:23,0:22:10.18:88,10,0	1/1:22,0:20:30.97:217,31,0	1/1:15,0:15:14.34:128,14,0	1/1:14,1:14:26.81:269,27,0	1/1:15,0:14:18.87:153,19,0	1/1:8,0:6:3.83:28,4,0	1/1:12,1:12:15:135,15,0	1/1:8,0:8:14.27:105,14,0	1/1:9,0:7:11.72:100,12,0	1/1:8,0:7:7.68:56,8,0	1/1:9,0:9:2.74:40,3,0	1/1:27,0:25:26.93:209,27,0	1/1:13,0:11:14.84:81,15,0	1/1:9,0:9:7.48:36,7,0	1/1:8,0:8:10.71:79,11,0	1/1:21,0:17:14.98:124,15,0	0/0:5,0:5:0.38:0,0,1	1/1:13,0:11:18.45:151,18,0	1/1:30,0:27:15.58:105,16,0	1/1:11,0:11:3.33:18,3,0	1/1:18,0:16:9.11:90,9,0	1/1:14,0:14:11.69:105,12,0	1/1:8,0:4:8.45:86,8,0
chr10	29484407	.	A	AC	1561.87	PASS	AB=0.950;AC=24;AF=0.462;AN=52;BaseQRankSum=7.972;DP=547;FS=7.605;HRun=1;HaplotypeScore=117.6005;InbreedingCoeff=-0.3326;MQ=28.77;MQ0=138;MQRankSum=-4.935;QD=3.44;ReadPosRankSum=0.194;VQSLOD=-0.1901;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:38,0:33:43.55:44,0,45	0/0:6,0:5:9:0,9,97	./.	./.	0/0:11,1:8:3.01:0,3,37	1/1:20,2:19:23.94:251,24,0	0/1:37,4:25:27.60:96,0,28	0/1:20,0:12:71.41:211,0,71	0/0:18,0:12:9.85:0,10,116	0/1:22,6:19:69.98:70,0,307	0/0:12,1:8:3.90:0,4,41	0/1:21,0:11:29.95:30,0,67	0/1:11,0:5:32.64:34,0,33	1/1:15,3:10:2.73:40,3,0	1/1:14,2:8:2.16:36,2,0	0/1:16,1:12:26.08:98,0,26	0/0:20,0:15:26.27:0,26,307	0/0:23,0:13:19.39:0,19,164	0/1:19,0:14:99:110,0,128	0/1:9,0:8:7.32:7,0,19	0/1:35,0:23:28.06:28,0,102	0/1:14,1:11:27.56:54,0,28	0/1:11,1:8:26.44:60,0,26	0/1:40,1:28:30.33:30,0,103	1/1:15,3:13:6.94:89,7,0	0/1:29,11:29:99:362,0,321	0/1:10,0:7:63.67:64,0,65	0/1:20,1:8:1.54:2,0,192
chr10	29484408	.	CA	C	1453.45	PASS	AB=0.873;AC=23;AF=0.442;AN=52;BaseQRankSum=7.728;DP=538;FS=10.310;HRun=1;HaplotypeScore=113.3815;InbreedingCoeff=-0.2882;MQ=28.58;MQ0=138;MQRankSum=-4.597;QD=3.44;ReadPosRankSum=0.859;VQSLOD=-0.6007;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:39,1:33:21.59:22,0,77	0/0:6,1:5:9.03:0,9,121	./.	./.	0/0:9,3:8:3.01:0,3,38	1/1:15,7:19:23.52:251,24,0	0/1:39,2:25:27.65:96,0,28	0/1:17,3:12:71.24:211,0,71	0/0:19,0:13:13.01:0,13,141	0/1:27,1:19:63.96:64,0,377	0/0:12,2:9:7.26:0,7,77	0/1:18,2:10:29.53:30,0,71	0/1:10,2:6:30.53:31,0,54	1/1:15,2:9:2.93:40,3,0	1/1:14,1:7:1.58:35,2,0	0/1:13,4:12:25.70:92,0,26	0/0:20,0:15:26:0,26,337	0/0:23,0:13:19.75:0,20,164	0/1:14,4:13:99:110,0,128	0/1:5,2:6:7.02:7,0,39	0/1:27,8:23:28.06:28,0,101	0/1:14,1:11:28.71:54,0,29	0/1:10,2:8:26.05:60,0,26	0/1:32,8:27:30.33:30,0,102	1/1:13,3:11:6.85:89,7,0	0/1:36,2:27:99:303,0,350	0/1:7,3:7:59.31:59,0,74	0/0:20,0:7:11.47:0,11,232
chr10	29484415	.	A	AC	1314.64	PASS	AB=0.970;AC=24;AF=0.429;AN=56;BaseQRankSum=9.076;DP=537;FS=3.892;HRun=1;HaplotypeScore=106.4239;InbreedingCoeff=-0.2952;MQ=28.89;MQ0=135;MQRankSum=-7.138;QD=3.13;ReadPosRankSum=-1.360;VQSLOD=-0.3613;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:44,0:37:89.75:90,0,204	0/0:8,0:6:9:0,9,97	0/0:5,0:1:0.47:0,0,1	0/0:4,0:1:3.01:0,3,37	0/0:13,0:9:3.01:0,3,38	1/1:19,3:19:15.61:169,16,0	0/1:39,0:24:22.27:22,0,69	0/1:24,0:15:99:156,0,256	0/1:20,1:16:19.07:19,0,239	0/1:24,0:15:39.72:40,0,348	0/0:14,0:9:6.91:0,7,79	0/0:19,0:9:5.30:0,5,45	0/1:12,0:6:21.33:21,0,68	1/1:14,1:8:3.48:35,3,0	1/1:12,2:6:5.85:46,6,0	0/1:16,1:12:55.30:55,0,67	0/0:18,0:13:22.64:0,23,212	0/1:21,0:11:14.13:14,0,125	0/1:11,0:6:58.18:135,0,58	0/1:7,0:6:18.24:24,0,18	0/0:36,0:23:13.85:0,14,154	0/1:13,1:10:29.09:59,0,29	0/1:11,1:8:21.64:22,0,35	0/1:37,2:28:6.78:7,0,89	1/1:13,3:11:7.19:96,7,0	0/1:30,5:25:99:394,0,271	0/1:11,0:8:57.18:57,0,65	0/1:19,0:8:13.95:14,0,232
chr10	29484416	.	CA	C	1122.99	PASS	AB=0.943;AC=23;AF=0.411;AN=56;BaseQRankSum=9.217;DP=546;FS=2.921;HRun=1;HaplotypeScore=106.0901;InbreedingCoeff=-0.3523;MQ=29.39;MQ0=136;MQRankSum=-6.642;QD=2.65;ReadPosRankSum=-0.300;VQSLOD=-0.4500;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:46,0:39:66.97:67,0,291	0/0:8,0:6:9.03:0,9,120	0/0:6,0:1:0.89:0,1,2	0/0:6,0:3:9.03:0,9,112	0/0:11,2:9:3.01:0,3,38	0/1:20,2:19:18.46:151,0,18	0/1:36,3:24:22.10:22,0,68	0/1:22,3:15:99:156,0,278	0/1:21,2:17:19.13:19,0,237	0/1:21,1:13:23.61:24,0,348	0/0:12,2:9:7.27:0,7,78	0/0:19,0:9:5.71:0,6,49	0/1:12,0:6:20.86:21,0,67	1/1:15,1:8:3.48:35,3,0	1/1:14,0:6:5.85:46,6,0	0/1:17,0:12:52.04:52,0,66	0/0:18,0:13:22.77:0,23,243	0/1:21,0:11:13.37:13,0,138	0/1:8,1:5:60.39:93,0,60	0/1:6,1:6:23.64:24,0,39	0/0:37,0:24:16.85:0,17,180	0/1:12,2:10:28.69:59,0,29	0/1:13,1:10:15.65:16,0,78	0/1:38,2:28:3.73:4,0,135	1/1:15,1:11:7.22:95,7,0	0/1:33,3:27:99:315,0,323	0/1:11,0:8:55.74:56,0,74	0/1:18,1:8:13.96:14,0,244
chr10	29484417	.	A	AC	1213.44	PASS	AB=0.985;AC=22;AF=0.393;AN=56;BaseQRankSum=9.820;DP=547;FS=0.603;HRun=1;HaplotypeScore=107.1307;InbreedingCoeff=-0.2901;MQ=29.27;MQ0=137;MQRankSum=-7.135;QD=3.15;ReadPosRankSum=-1.808;VQSLOD=-0.7598;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:44,2:39:99:101,0,281	0/0:8,0:6:9:0,9,97	0/0:8,0:1:0.47:0,0,1	0/0:6,0:3:9.03:0,9,113	0/0:12,0:9:3.01:0,3,38	0/1:22,0:19:15.51:156,0,16	0/1:39,1:25:22.44:22,0,69	0/1:25,0:15:99:150,0,283	0/1:23,0:17:5.88:6,0,240	0/1:22,0:13:4.16:4,0,347	0/0:14,0:9:0.41:0,0,68	0/0:18,1:9:3.48:0,3,40	0/1:12,0:6:43.03:43,0,65	1/1:16,0:8:5.69:49,6,0	1/1:14,0:6:6.01:65,6,0	0/1:16,0:11:61.74:62,0,64	0/0:18,0:13:15.34:0,15,210	0/1:20,0:10:9.98:10,0,133	0/1:9,0:5:61.20:93,0,61	0/1:7,0:6:18.23:24,0,18	0/0:38,0:24:15.04:0,15,177	0/1:14,0:10:29.09:64,0,29	0/1:14,1:11:18.51:19,0,76	0/0:38,0:26:12.92:0,13,150	1/1:16,1:12:7.55:103,8,0	0/1:36,1:27:99:328,0,292	0/1:10,0:8:63.99:64,0,65	0/1:19,0:8:6.16:6,0,234
chr10	29484418	.	CA	C	1093.19	PASS	AB=0.912;AC=21;AF=0.375;AN=56;BaseQRankSum=9.717;DP=545;FS=2.883;HRun=1;HaplotypeScore=102.2626;InbreedingCoeff=-0.3783;MQ=29.33;MQ0=136;MQRankSum=-6.212;QD=2.84;ReadPosRankSum=-1.206;VQSLOD=-0.6268;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:45,0:39:84.86:85,0,304	0/0:7,1:6:9.03:0,9,120	0/0:9,0:2:3.90:0,4,39	0/0:7,0:3:9.03:0,9,113	0/0:10,0:7:3.01:0,3,38	0/1:17,4:18:16.51:157,0,17	0/1:38,2:25:19.27:19,0,102	0/1:22,3:15:99:150,0,281	0/1:23,0:17:5.95:6,0,239	0/1:21,1:13:3.80:4,0,349	0/0:12,2:9:0.42:0,0,67	0/0:17,2:9:3.90:0,4,44	0/1:10,1:5:23.86:24,0,67	1/1:15,1:8:5.69:49,6,0	1/1:13,1:6:6.01:65,6,0	0/1:14,2:11:61.11:61,0,63	0/0:18,0:13:15.47:0,15,241	0/1:20,0:10:9.97:10,0,137	0/1:8,2:6:81.24:90,0,81	0/1:5,2:6:20.63:21,0,72	0/0:34,4:24:21.07:0,21,260	0/1:12,2:10:28.69:64,0,29	0/1:14,1:11:15.65:16,0,122	0/0:32,5:26:12.92:0,13,153	0/1:14,3:12:26.11:92,0,26	0/1:34,3:27:99:278,0,386	0/1:10,2:9:52.25:52,0,95	0/1:19,0:8:6.17:6,0,244
chr10	29486058	.	G	GC	5046.53	PASS	AB=0.702;AC=42;AF=0.750;AN=56;BaseQRankSum=-4.729;DP=429;FS=6.873;HRun=10;HaplotypeScore=56.6534;InbreedingCoeff=-0.1441;MQ=80.22;MQ0=0;MQRankSum=-1.706;QD=12.19;ReadPosRankSum=-0.658;VQSLOD=3.9043;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:10,12:22:3.67:146,0,4	1/1:1,7:8:9.46:96,9,0	0/1:16,0:17:13.38:13,0,107	0/1:11,0:12:33.99:34,0,83	0/1:5,8:13:9.56:113,0,10	1/1:4,10:14:21.05:224,21,0	1/1:8,21:29:54.14:576,54,0	0/1:14,5:19:12.70:69,0,13	0/0:13,2:15:26.92:0,27,218	0/1:6,8:14:6.66:119,0,7	1/1:1,4:6:5.18:90,5,0	1/1:4,10:14:5.64:234,6,0	0/1:8,7:15:22.38:196,0,22	1/1:2,16:18:33.08:352,33,0	1/1:3,11:14:21.05:224,21,0	1/1:5,5:10:12.03:128,12,0	1/1:2,26:28:29.50:519,29,0	0/1:5,13:18:16.20:254,0,16	1/1:5,8:13:23.65:232,24,0	1/1:5,10:15:18.52:193,19,0	0/1:15,11:26:3.58:171,0,4	0/1:4,12:17:19.38:208,0,19	1/1:2,6:8:8.99:95,9,0	0/1:10,11:21:13.36:226,0,13	1/1:3,9:12:24.05:249,24,0	1/1:10,4:14:9:86,9,0	0/1:5,9:14:25.23:167,0,25	1/1:0,2:2:3.01:32,3,0
chr10	29487266	.	AAAAC	A	2536.28	PASS	AB=0.953;AC=34;AF=0.607;AN=56;BaseQRankSum=-2.239;DP=393;FS=20.634;HRun=0;HaplotypeScore=83.1801;InbreedingCoeff=0.2257;MQ=68.02;MQ0=8;MQRankSum=-1.273;QD=9.43;ReadPosRankSum=0.475;VQSLOD=1.1072;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:31:29.30:0,29,313	0/1:5,1:6:4.41:90,0,4	0/0:29,0:12:11.87:0,12,188	0/0:23,0:9:17.61:0,18,153	1/1:23,3:26:11.39:266,11,0	1/1:13,0:12:4.43:122,4,0	0/1:15,1:16:8.90:150,0,9	0/1:20,2:20:42.12:222,0,42	0/0:6,0:6:12.03:0,12,179	1/1:8,0:7:12.45:77,12,0	0/1:12,0:12:9.69:75,0,10	1/1:2,2:4:11.99:136,12,0	0/1:7,0:7:27.10:40,0,27	1/1:13,1:14:11.47:148,11,0	1/1:8,1:8:11.80:98,12,0	0/1:9,1:10:8.23:97,0,8	0/0:19,0:19:44.78:0,45,555	0/0:14,0:13:29.24:0,29,271	1/1:26,1:26:54.45:407,54,0	0/1:11,0:11:0.79:79,0,1	1/1:13,0:13:0.54:35,1,0	1/1:3,0:3:8.63:46,9,0	0/1:12,0:12:41.42:78,0,41	1/1:10,1:11:20.31:138,20,0	0/1:9,1:10:14.08:127,0,14	1/1:12,0:12:3.99:133,4,0	1/1:13,1:14:14.63:116,15,0	0/1:9,0:8:6.75:38,0,7
chr10	29487267	.	AAAC	A	4887.16	PASS	AB=0.769;AC=43;AF=0.768;AN=56;BaseQRankSum=-2.828;DP=383;FS=41.655;HRun=0;HaplotypeScore=68.0501;InbreedingCoeff=0.8174;MQ=68.51;MQ0=8;MQRankSum=-2.706;QD=18.72;ReadPosRankSum=0.345;VQSLOD=2.6658;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:30:28.39:0,28,229	1/1:5,1:6:12.02:133,12,0	0/0:29,0:12:6.02:0,6,145	0/0:23,0:9:17.63:0,18,138	1/1:21,3:24:48.70:421,49,0	1/1:6,5:10:21.03:236,21,0	1/1:13,3:16:19.21:323,19,0	1/1:21,1:20:30.26:306,30,0	0/0:6,0:6:11.69:0,12,125	1/1:4,4:7:14.90:157,15,0	1/1:6,6:12:25.12:225,25,0	1/1:4,0:4:11.98:103,12,0	1/1:6,1:7:12:118,12,0	1/1:10,4:14:32.79:339,33,0	1/1:3,6:9:12.01:129,12,0	0/1:7,3:10:3.99:162,0,4	0/0:19,0:19:39.12:0,39,407	0/0:13,0:12:17.97:0,18,146	1/1:6,19:24:62.31:562,62,0	1/1:10,1:11:15.04:170,15,0	1/1:5,7:12:13.37:136,13,0	1/1:1,2:3:9.03:117,9,0	1/1:11,2:13:3.71:168,4,0	1/1:3,8:11:21.06:265,21,0	1/1:8,2:10:18.54:176,19,0	1/1:3,8:11:25.53:234,26,0	1/1:5,8:13:23.59:248,24,0	1/1:6,3:8:15.30:159,15,0
chr10	29487268	.	AAC	A	4297.68	PASS	AB=0.950;AC=44;AF=0.786;AN=56;BaseQRankSum=-0.445;DP=369;FS=38.294;HRun=0;HaplotypeScore=62.1925;InbreedingCoeff=0.7294;MQ=71.82;MQ0=6;MQRankSum=-4.015;QD=16.28;ReadPosRankSum=0.136;VQSLOD=2.7683;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:30:25.89:0,26,171	1/1:6,0:6:11.97:97,12,0	0/0:29,0:13:6.55:0,7,142	0/0:24,0:10:20.26:0,20,136	1/1:20,4:24:53.63:436,54,0	1/1:10,1:10:20.97:175,21,0	1/1:14,1:15:33:293,33,0	1/1:19,1:18:41.08:317,41,0	0/0:5,0:5:5.62:0,6,74	1/1:7,0:6:14.90:112,15,0	1/1:10,2:12:26.85:223,27,0	1/1:4,0:4:11.93:91,12,0	1/1:6,0:6:11.97:97,12,0	1/1:12,1:13:32.86:264,33,0	1/1:8,0:8:11.87:87,12,0	0/1:8,1:9:3.62:133,0,4	0/0:16,0:16:13.78:0,14,251	0/1:13,0:12:9.48:9,0,38	1/1:22,1:23:62.62:509,63,0	1/1:10,1:11:20.30:159,20,0	1/1:9,2:11:15.40:127,15,0	1/1:3,0:3:8.98:71,9,0	1/1:13,0:13:19.09:135,19,0	1/1:11,0:11:20.94:167,21,0	1/1:11,1:12:28.12:224,28,0	1/1:10,1:11:29.82:224,30,0	1/1:10,2:12:23.95:210,24,0	1/1:7,1:8:16.54:139,17,0
chr10	29487269	.	AC	A	3947.89	PASS	AB=0.840;AC=45;AF=0.804;AN=56;BaseQRankSum=0.176;DP=358;FS=58.412;HRun=1;HaplotypeScore=56.5750;InbreedingCoeff=0.5256;MQ=75.08;MQ0=6;MQRankSum=-4.272;QD=15.01;ReadPosRankSum=1.003;VQSLOD=0.3616;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:26:1.11:0,1,97	1/1:6,0:6:11.82:80,12,0	0/0:29,0:14:7.98:0,8,150	0/0:25,0:11:18.83:0,19,128	1/1:20,2:22:52.57:376,53,0	1/1:10,0:9:20.81:153,21,0	1/1:16,0:16:43.55:291,44,0	1/1:20,0:19:46.44:338,46,0	0/1:2,3:5:30.73:31,0,42	1/1:5,0:5:14.60:95,15,0	1/1:10,2:12:26.73:198,27,0	1/1:4,0:4:11.82:80,12,0	1/1:6,0:6:11.85:86,12,0	1/1:13,0:13:32.53:215,33,0	1/1:9,0:8:11.50:65,12,0	0/1:8,0:8:3.48:101,0,3	0/1:15,2:17:53.43:53,0,159	0/0:13,0:12:4.96:0,5,45	1/1:21,2:23:62.25:443,62,0	1/1:10,0:11:23.78:174,24,0	1/1:9,2:11:15.32:118,15,0	1/1:3,0:3:8.83:54,9,0	1/1:10,1:11:21.53:132,22,0	1/1:11,0:11:20.62:127,21,0	1/1:13,0:13:35.63:253,36,0	1/1:9,1:10:29.77:228,30,0	1/1:11,0:11:23.57:148,24,0	1/1:6,0:6:17.06:110,17,0
chr10	29487957	.	CA	C	2327.51	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=11.788;DP=749;FS=7.318;HRun=1;HaplotypeScore=83.2599;InbreedingCoeff=0.9996;MQ=72.10;MQ0=3;MQRankSum=-0.966;QD=33.73;ReadPosRankSum=2.740;VQSLOD=3.4127;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:42:99:0,120,1859	0/0:9,0:9:27.09:0,27,431	0/0:36,1:28:61:0,61,1001	0/0:39,0:32:50.94:0,51,785	0/0:30,0:30:90.29:0,90,1409	0/0:19,0:19:57.12:0,57,804	0/0:20,0:20:60.19:0,60,924	0/0:38,0:38:99:0,108,1659	1/1:0,24:24:60.20:834,60,0	0/0:32,0:32:93.10:0,93,1427	0/0:20,0:20:60.18:0,60,904	0/0:17,0:17:50.50:0,51,727	0/0:22,0:22:63.18:0,63,955	0/0:26,0:26:78.27:0,78,1238	0/0:20,0:20:60.19:0,60,932	0/0:29,0:29:87.27:0,87,1342	1/1:0,30:30:78.26:1089,78,0	1/1:1,14:15:40.02:547,40,0	0/0:23,0:23:69.19:0,69,1020	0/0:32,0:32:96.30:0,96,1482	0/0:33,0:33:96.28:0,96,1454	0/0:28,0:28:84.29:0,84,1337	0/0:25,0:25:72.09:0,72,1090	0/0:30,0:30:90.31:0,90,1433	0/0:24,0:24:72.20:0,72,1074	0/0:34,0:34:99:0,102,1605	0/0:31,0:31:93.28:0,93,1431	0/0:15,0:15:45.10:0,45,668
chr10	29488501	.	G	GA	7999.38	PASS	AB=0.657;AC=48;AF=0.857;AN=56;BaseQRankSum=-4.436;DP=489;FS=0.678;HRun=11;HaplotypeScore=61.1592;InbreedingCoeff=0.1055;MQ=79.37;MQ0=3;MQRankSum=-1.355;QD=16.81;ReadPosRankSum=0.669;VQSLOD=5.5638;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,3:22:25.72:253,26,0	1/1:1,7:8:21.04:213,21,0	0/1:17,0:14:12.88:13,0,56	0/0:13,0:11:4.26:0,4,33	1/1:6,21:28:26.64:583,27,0	0/1:5,12:18:4.32:344,0,4	0/1:5,12:17:13.30:241,0,13	1/1:11,12:23:15.78:319,16,0	1/1:6,2:22:31.41:173,31,0	1/1:6,14:21:21.68:387,22,0	0/1:7,14:22:1.67:311,0,2	1/1:1,8:9:21.04:213,21,0	1/1:3,12:16:9.53:265,10,0	1/1:3,12:15:9.84:281,10,0	1/1:1,11:12:30.06:305,30,0	0/1:4,10:15:10.57:252,0,11	1/1:0,2:19:42.94:246,43,0	1/1:4,0:25:20.33:206,20,0	1/1:5,7:13:3.65:204,4,0	1/1:5,16:22:27.49:422,27,0	1/1:1,7:9:20.88:197,21,0	1/1:0,17:17:45.09:457,45,0	1/1:6,14:20:39.08:396,39,0	1/1:0,12:12:30.06:305,30,0	1/1:7,12:19:27.05:274,27,0	1/1:2,15:19:27.60:432,28,0	1/1:3,13:18:34.99:360,35,0	0/1:5,12:17:0.74:346,0,1
chr10	29489453	.	TACACAC	T	2272.08	PASS	AB=0.967;AC=40;AF=0.769;AN=52;BaseQRankSum=6.303;DP=654;FS=0.000;HRun=0;HaplotypeScore=178.0400;InbreedingCoeff=0.3769;MQ=54.11;MQ0=27;MQRankSum=-5.764;QD=4.26;ReadPosRankSum=1.809;VQSLOD=2.5997;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:21,0:23:2.55:3,0,25	1/1:9,0:9:3.01:40,3,0	./.	./.	1/1:23,0:23:5.95:118,6,0	1/1:38,0:36:18.06:289,18,0	0/1:23,0:23:5.57:48,0,6	0/1:26,0:25:0:0,0,0	1/1:11,9:21:9.02:147,9,0	1/1:28,0:26:4.83:47,5,0	1/1:14,0:14:9.03:143,9,0	1/1:15,0:15:9.03:144,9,0	1/1:20,0:20:6.02:101,6,0	1/1:21,0:21:8.98:106,9,0	1/1:30,0:30:9.03:128,9,0	1/1:24,0:23:20.94:336,21,0	0/0:24,0:24:27.34:0,27,751	0/0:16,0:15:24.08:0,24,649	1/1:18,0:17:4.95:96,5,0	1/1:24,0:22:9.50:144,10,0	0/1:33,0:31:0:0,0,0	1/1:19,0:19:3.01:60,3,0	1/1:19,0:18:9.03:143,9,0	1/1:38,0:38:2.61:41,3,0	0/1:13,1:13:0:0,0,0	0/1:24,0:24:47.09:136,0,47	1/1:27,0:27:11.87:140,12,0	0/0:10,0:9:3:0,3,28
chr10	29489478	.	ACACACACACACACACACACACATG	A	12451.90	PASS	AB=0.801;AC=40;AF=0.714;AN=56;BaseQRankSum=8.248;DP=698;FS=5.144;HRun=0;HaplotypeScore=291.7000;InbreedingCoeff=0.3119;MQ=47.67;MQ0=42;MQRankSum=0.821;QD=21.51;ReadPosRankSum=3.667;VQSLOD=3.0966;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:31,0:28:54.67:55,0,156	1/1:0,10:10:3.01:191,3,0	0/0:27,0:4:2.99:0,3,24	0/0:24,0:12:15.02:0,15,189	1/1:5,24:29:9.50:367,9,0	1/1:12,29:37:19.88:1093,20,0	0/1:26,0:26:53.77:176,0,54	0/1:12,28:35:99:1018,0,107	0/0:22,0:22:33.06:0,33,1410	1/1:9,20:27:39.03:889,39,0	1/1:2,17:19:9.03:550,9,0	1/1:1,15:16:12.04:583,12,0	1/1:3,13:16:6.02:360,6,0	1/1:6,17:22:9.03:463,9,0	1/1:4,27:31:4.62:528,5,0	1/1:4,25:26:21.07:1229,21,0	0/0:28,0:27:64.46:0,64,2835	0/0:17,0:16:36.12:0,36,2307	1/1:6,16:20:36.67:1108,37,0	1/1:4,23:25:15.05:732,15,0	1/1:34,0:28:5.98:49,6,0	1/1:3,19:22:3.01:168,3,0	1/1:4,19:21:9.03:550,9,0	0/1:14,18:32:18.28:185,0,18	1/1:14,0:13:14.52:99,15,0	0/1:8,22:29:99:1135,0,115	1/1:6,21:26:13.35:817,13,0	0/1:8,0:7:44.47:110,0,44
chr10	29489500	.	ATG	A	3810.67	PASS	AB=0.829;AC=43;AF=0.768;AN=56;BaseQRankSum=10.783;DP=605;FS=0.000;HRun=0;HaplotypeScore=154.2486;InbreedingCoeff=0.4611;MQ=51.22;MQ0=28;MQRankSum=-1.186;QD=7.89;ReadPosRankSum=3.248;VQSLOD=3.1436;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:17,4:18:8.45:63,8,0	1/1:10,0:10:3.01:31,3,0	0/0:24,0:6:13.44:0,13,248	0/0:26,0:11:29.85:0,30,484	1/1:24,0:24:9.02:92,9,0	1/1:36,0:33:19.65:129,20,0	1/1:1,14:15:2.93:35,3,0	0/1:38,0:34:70.63:870,0,71	0/0:23,0:23:1.79:0,2,517	1/1:20,0:20:36.06:522,36,0	1/1:17,1:18:8.92:62,9,0	1/1:16,0:16:11.89:87,12,0	1/1:13,0:13:5.97:48,6,0	1/1:18,0:17:9.01:95,9,0	1/1:29,0:29:8.89:59,9,0	1/1:27,0:25:20.94:177,21,0	0/1:26,1:26:49.64:50,0,610	0/0:21,0:20:57.18:0,57,895	1/1:21,0:17:32.19:535,32,0	1/1:24,0:23:14.94:132,15,0	0/0:11,17:24:3.31:0,3,45	1/1:19,0:19:2.99:23,3,0	1/1:21,0:19:8.44:62,8,0	1/1:19,1:20:2.97:20,3,0	0/1:1,10:11:0.01:0,0,0	1/1:27,0:26:7.43:570,7,0	1/1:23,0:22:14.68:114,15,0	1/1:2,3:4:3.48:36,3,0
chr10	29490203	.	A	AGC	592.53	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.316;DP=584;FS=9.717;HRun=0;HaplotypeScore=76.2959;InbreedingCoeff=0.9745;MQ=90.32;MQ0=0;MQRankSum=-5.660;QD=37.03;ReadPosRankSum=-0.549;VQSLOD=5.2653;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,13:16:41.17:687,41,0	0/0:6,0:6:18.06:0,18,294	0/0:22,0:22:66.21:0,66,1039	0/0:25,0:25:72.18:0,72,1106	0/0:22,0:22:66.20:0,66,1051	0/0:8,0:8:24.08:0,24,382	0/0:28,0:28:81.25:0,81,1296	0/0:35,0:35:99:0,105,1689	0/0:14,0:14:36.12:0,36,584	0/0:27,0:27:81.28:0,81,1322	0/0:20,0:20:57.11:0,57,872	0/0:26,0:26:78.27:0,78,1259	0/0:7,0:7:18.06:0,18,294	0/0:22,0:22:63.22:0,63,1023	0/0:29,0:29:84.29:0,84,1356	0/0:19,0:19:54.17:0,54,857	0/0:19,0:19:57.19:0,57,926	0/0:17,0:17:51.17:0,51,832	0/0:23,0:23:66.23:0,66,1076	0/0:26,0:26:78.27:0,78,1272	0/0:33,0:33:99:0,99,1588	0/0:19,0:19:48.16:0,48,783	0/0:16,0:16:48.16:0,48,783	0/0:20,0:20:60.20:0,60,974	0/0:27,0:27:75.26:0,75,1216	0/0:26,0:26:78.27:0,78,1272	0/0:26,0:26:63.21:0,63,1017	0/0:6,0:6:18.06:0,18,294
chr10	29490205	.	T	TCCACAGAG	1715.69	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.125;DP=590;FS=12.903;HRun=0;HaplotypeScore=147.5531;InbreedingCoeff=0.9734;MQ=90.08;MQ0=0;MQRankSum=-6.093;QD=90.30;ReadPosRankSum=0.594;VQSLOD=3.8905;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,13:19:26.61:1810,27,0	0/0:6,0:6:18.06:0,18,545	0/0:23,0:23:69.20:0,69,1946	0/0:24,0:24:66.12:0,66,1795	0/0:21,0:21:63.22:0,63,1865	0/0:8,0:8:24.04:0,24,626	0/0:30,0:30:84.29:0,84,2435	0/0:36,0:36:99:0,108,3060	0/0:14,0:14:36.12:0,36,1091	0/0:28,0:28:81.28:0,81,2352	0/0:22,0:22:60.16:0,60,1675	0/0:25,0:25:72.25:0,72,2171	0/0:7,0:7:18.06:0,18,545	0/0:22,0:22:66.23:0,66,1941	0/0:29,0:29:81.26:0,81,2310	0/0:21,0:21:57.16:0,57,1628	0/0:19,0:19:57.18:0,57,1661	0/0:17,0:17:51.18:0,51,1512	0/0:22,0:22:66.18:0,66,1895	0/0:26,0:26:78.27:0,78,2357	0/0:32,0:32:96.31:0,96,2812	0/0:19,0:19:54.18:0,54,1505	0/0:17,0:17:48.16:0,48,1454	0/0:20,0:20:60.21:0,60,1800	0/0:24,0:24:66.23:0,66,2000	0/0:27,0:27:81.26:0,81,2318	0/0:26,0:26:63.18:0,63,1839	0/0:6,0:6:18.06:0,18,515
chr10	29490290	.	GGCTC	G	3845.08	PASS	AB=0.760;AC=40;AF=0.800;AN=50;BaseQRankSum=-1.735;DP=441;FS=1.363;HRun=0;HaplotypeScore=76.2815;InbreedingCoeff=0.7247;MQ=79.33;MQ0=11;MQRankSum=-0.491;QD=13.12;ReadPosRankSum=1.042;VQSLOD=2.8770;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:12,0:8:0:0,0,0	1/1:4,0:4:12:132,12,0	0/0:42,0:22:30.76:0,31,297	0/0:50,0:24:42.59:0,43,320	1/1:15,0:15:32.93:297,33,0	1/1:11,0:11:32.95:317,33,0	0/1:2,23:25:0:1,0,0	1/1:4,19:23:52.27:436,52,0	./.	1/1:18,0:18:45.07:458,45,0	1/1:12,0:12:2.96:19,3,0	1/1:13,0:13:26.90:218,27,0	1/1:11,0:11:6.02:90,6,0	1/1:11,0:11:26.82:228,27,0	./.	1/1:10,0:10:2.58:166,3,0	0/0:8,0:8:17.85:0,18,251	0/0:9,0:9:26.89:0,27,226	1/1:12,0:11:33:339,33,0	1/1:17,0:17:14.55:93,15,0	1/1:19,0:19:35.90:286,36,0	1/1:18,1:18:6.02:74,6,0	1/1:10,1:12:26.83:256,27,0	1/1:7,0:6:8.93:65,9,0	./.	1/1:1,8:9:23.99:205,24,0	1/1:3,24:27:1.88:53,2,0	1/1:6,0:4:12:112,12,0
chr10	29490291	.	GCTCGCTCT	G	2582.64	PASS	AB=0.948;AC=31;AF=0.620;AN=50;BaseQRankSum=-5.060;DP=442;FS=24.295;HRun=0;HaplotypeScore=99.0338;InbreedingCoeff=0.0711;MQ=78.08;MQ0=13;MQRankSum=1.354;QD=8.84;ReadPosRankSum=-1.156;VQSLOD=0.2639;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:13,0:9:0:0,0,0	1/1:4,0:4:11.03:82,11,0	0/0:42,0:22:31.43:0,31,298	0/0:49,0:23:40.32:0,40,309	1/1:14,0:14:1.45:177,1,0	0/1:11,0:11:83.88:117,0,84	1/1:24,1:25:0.94:2,1,0	1/1:21,0:22:35.41:400,35,0	./.	1/1:17,0:17:44.44:411,44,0	1/1:2,0:11:2.96:19,3,0	0/1:14,0:14:42.91:129,0,43	0/1:10,1:11:4.16:75,0,4	0/1:11,0:11:9.49:147,0,9	./.	0/1:10,0:10:99:154,0,108	0/0:10,0:10:20.86:0,21,425	0/0:10,0:10:27.82:0,28,338	1/1:12,0:11:15.22:284,15,0	0/1:4,13:17:32.90:33,0,36	1/1:19,0:18:35.90:286,36,0	0/1:18,0:18:1.72:26,0,2	0/1:13,0:13:29.85:105,0,30	0/1:7,0:6:15.94:16,0,50	./.	1/1:8,0:9:9.86:164,10,0	0/1:26,0:26:13.51:50,0,14	1/1:6,0:4:0.55:63,1,0
chr10	29490293	.	TCG	T	3958.57	PASS	AB=1.000;AC=39;AF=0.780;AN=50;BaseQRankSum=-1.262;DP=434;FS=2.205;HRun=0;HaplotypeScore=65.5013;InbreedingCoeff=0.7792;MQ=72.15;MQ0=20;MQRankSum=-1.079;QD=14.94;ReadPosRankSum=0.746;VQSLOD=3.3599;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:14,0:10:0:0,0,0	1/1:5,0:4:12:107,12,0	0/0:38,0:18:30.03:0,30,295	0/0:47,0:21:42.79:0,43,326	1/1:13,0:12:32.97:298,33,0	1/1:11,0:11:33.03:367,33,0	0/0:24,0:24:0:0,0,0	1/1:20,0:20:52.27:437,52,0	./.	1/1:16,0:15:45.07:435,45,0	1/1:11,0:10:2.96:19,3,0	1/1:14,0:14:27.48:270,27,0	1/1:1,10:11:6.01:73,6,0	1/1:10,1:11:26.99:258,27,0	./.	1/1:10,0:10:24.46:207,24,0	0/0:10,0:10:15.51:0,16,167	0/0:10,0:10:24.31:0,24,180	1/1:13,0:11:32.99:300,33,0	1/1:17,0:16:14.55:93,15,0	1/1:19,0:18:35.81:285,36,0	1/1:2,16:17:6.02:92,6,0	1/1:14,1:14:26.83:237,27,0	1/1:6,0:5:9.02:113,9,0	./.	1/1:10,0:10:24.46:206,24,0	1/1:24,1:25:5.94:44,6,0	1/1:6,0:4:12:118,12,0
chr10	29490340	.	CTGTGTG	C	988.16	PASS	AB=0.925;AC=18;AF=0.375;AN=48;BaseQRankSum=0.134;DP=431;FS=17.655;HRun=0;HaplotypeScore=91.9562;InbreedingCoeff=-0.1763;MQ=36.67;MQ0=79;MQRankSum=-1.388;QD=3.48;ReadPosRankSum=3.704;VQSLOD=0.3534;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/0:5,0:4:0:0,0,0	./.	./.	0/0:23,1:17:0.31:0,0,61	0/1:12,0:10:29.22:29,0,53	0/1:17,0:13:5.72:6,0,10	0/1:13,0:15:25.55:26,0,51	./.	0/1:21,1:19:42.39:175,0,42	0/0:16,0:12:4.72:0,5,25	0/0:7,6:13:2.52:0,3,12	1/1:16,0:15:4.12:84,4,0	1/1:14,0:13:6.57:62,7,0	0/0:18,0:14:0:0,0,0	0/1:18,0:13:10.79:13,0,11	0/0:11,0:9:6.90:0,7,85	0/0:7,0:5:0.73:0,1,20	0/1:12,0:14:2.86:65,0,3	0/0:17,2:18:5.52:0,6,37	0/1:19,0:10:0:0,0,0	1/1:26,0:19:8.63:154,9,0	0/1:22,1:22:15.83:47,0,16	0/0:14,0:9:3:0,3,25	0/1:19,0:16:11.45:74,0,11	0/1:12,0:14:20.77:88,0,21	0/1:25,3:25:92.07:163,0,92	0/1:17,1:12:72.63:130,0,73
chr10	29490365	.	TGTGTGA	T	1402.50	PASS	AB=0.980;AC=17;AF=0.340;AN=50;BaseQRankSum=-1.620;DP=388;FS=42.297;HRun=0;HaplotypeScore=85.5075;InbreedingCoeff=-0.3583;MQ=35.75;MQ0=67;MQRankSum=-3.251;QD=5.48;ReadPosRankSum=1.157;VQSLOD=-0.0789;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:7,0:6:0.47:0,0,1	./.	./.	0/0:20,0:14:11.91:0,12,183	0/1:11,0:9:31.64:32,0,82	0/1:16,0:12:55.82:56,0,61	0/1:19,0:17:63.49:63,0,75	0/0:12,0:10:6.01:0,6,66	0/1:17,0:15:82.64:256,0,83	0/0:17,0:14:8.72:0,9,79	0/0:8,0:8:3.46:0,3,23	0/1:13,0:12:57.44:110,0,57	1/1:13,0:12:8.76:91,9,0	0/0:18,0:14:6:0,6,51	0/1:17,0:11:20.37:25,0,20	0/0:9,0:7:8.91:0,9,71	0/1:5,0:4:15.44:15,0,59	0/1:10,0:8:30.86:135,0,31	0/0:24,0:22:17.39:0,17,138	0/1:15,0:7:0.02:0,0,0	0/1:27,0:19:13.32:102,0,13	0/1:15,7:21:30.24:30,0,60	0/0:14,0:10:3.01:0,3,45	0/1:10,0:9:32.01:52,0,32	0/1:19,0:15:67.14:140,0,67	0/1:25,0:22:99:201,0,179	0/1:15,0:12:80.74:234,0,81
chr10	29491239	.	GA	G	7497.43	PASS	AB=0.743;AC=52;AF=0.929;AN=56;BaseQRankSum=-4.167;DP=422;FS=17.207;HRun=10;HaplotypeScore=59.5920;InbreedingCoeff=0.2689;MQ=71.40;MQ0=0;MQRankSum=-2.881;QD=17.77;ReadPosRankSum=3.426;VQSLOD=3.8569;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:20:33.85:112,34,0	1/1:2,6:8:17.98:152,18,0	0/1:14,1:11:3.16:3,0,155	0/1:10,1:11:3.76:4,0,167	1/1:6,15:20:22.28:365,22,0	0/1:1,9:10:3.18:204,0,3	1/1:2,12:14:23.99:208,24,0	1/1:9,22:31:62.93:544,63,0	1/1:3,8:11:23.99:208,24,0	1/1:5,12:17:38.91:330,39,0	1/1:3,20:23:48.44:418,48,0	1/1:3,12:15:29.99:260,30,0	1/1:2,8:10:14.99:130,15,0	1/1:3,11:14:26.99:234,27,0	1/1:0,12:12:32.99:286,33,0	1/1:1,12:13:32.99:287,33,0	1/1:2,18:20:44.98:391,45,0	1/1:1,16:17:44.99:391,45,0	1/1:1,14:15:41.97:365,42,0	0/1:4,9:13:0.19:227,0,0	1/1:0,10:10:23.99:208,24,0	1/1:2,12:14:35.95:306,36,0	1/1:3,7:10:20.99:182,21,0	1/1:2,20:22:53.88:469,54,0	1/1:1,10:11:26.99:234,27,0	1/1:2,17:19:50.89:433,51,0	1/1:2,13:15:35.98:312,36,0	1/1:1,10:11:26.99:234,27,0
chr10	29491370	.	GC	G	494.63	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.196;DP=547;FS=0.928;HRun=2;HaplotypeScore=67.3056;InbreedingCoeff=0.9745;MQ=87.90;MQ0=0;MQRankSum=-7.048;QD=19.79;ReadPosRankSum=2.181;VQSLOD=3.7481;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,20:25:53.10:589,53,0	0/0:5,0:5:15.05:0,15,225	0/0:20,0:20:57.17:0,57,820	0/0:20,0:20:59.19:0,59,809	0/0:20,0:20:57.18:0,57,830	0/0:17,0:17:51.17:0,51,764	0/0:22,0:22:63.20:0,63,925	0/0:41,0:41:99:0,123,1842	0/0:14,0:14:42.14:0,42,626	0/0:20,0:20:57.19:0,57,837	0/0:9,0:9:24.08:0,24,354	0/0:23,0:23:69.23:0,69,1030	0/0:17,0:17:51.17:0,51,764	0/0:14,0:14:42.13:0,42,598	0/0:14,0:14:42.14:0,42,628	0/0:15,0:15:45.14:0,45,654	0/0:32,0:32:96.31:0,96,1420	0/0:15,0:15:42.08:0,42,583	0/0:33,0:33:99:0,99,1452	0/0:15,0:15:45.15:0,45,673	0/0:26,0:26:78.26:0,78,1169	0/0:13,0:13:33.10:0,33,473	0/0:21,0:21:60.20:0,60,898	0/0:21,0:21:63.21:0,63,944	0/0:24,0:24:66.22:0,66,989	0/0:24,0:24:72.24:0,72,1079	0/0:21,0:21:60.20:0,60,896	0/0:6,0:6:18.06:0,18,270
chr10	29491375	.	CACCAG	C	992.97	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.540;DP=544;FS=0.878;HRun=0;HaplotypeScore=109.7696;InbreedingCoeff=0.9726;MQ=88.75;MQ0=0;MQRankSum=-6.977;QD=45.13;ReadPosRankSum=1.485;VQSLOD=3.9785;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,20:22:59.70:1088,60,0	0/0:5,0:5:15.05:0,15,472	0/0:23,0:23:69.24:0,69,2140	0/0:18,0:18:54.16:0,54,1592	0/0:20,0:20:60.21:0,60,1807	0/0:18,0:18:54.19:0,54,1704	0/0:20,0:20:60.21:0,60,1878	0/0:42,0:42:99:0,126,3779	0/0:15,0:15:45.15:0,45,1454	0/0:20,0:20:60.21:0,60,1900	0/0:8,0:8:21.07:0,21,678	0/0:25,0:25:75.26:0,75,2301	0/0:16,0:16:48.16:0,48,1551	0/0:14,0:14:39.13:0,39,1240	0/0:13,0:13:39.13:0,39,1250	0/0:14,0:14:42.14:0,42,1357	0/0:32,0:32:96.33:0,96,3069	0/0:13,0:13:39.13:0,39,1223	0/0:31,0:31:93.32:0,93,2820	0/0:15,0:15:42.14:0,42,1315	0/0:28,0:28:84.29:0,84,2634	0/0:13,0:13:36.12:0,36,1112	0/0:21,0:21:60.21:0,60,1860	0/0:22,0:22:66.23:0,66,2008	0/0:24,0:24:63.22:0,63,2003	0/0:26,0:26:78.27:0,78,2430	0/0:20,0:20:60.21:0,60,1876	0/0:6,0:6:18.06:0,18,581
chr10	29493062	.	AAT	A	2941.75	PASS	AB=0.500;AC=41;AF=0.788;AN=52;BaseQRankSum=3.799;DP=217;FS=3.436;HRun=0;HaplotypeScore=37.8869;InbreedingCoeff=0.5313;MQ=80.49;MQ0=2;MQRankSum=0.099;QD=24.31;ReadPosRankSum=-4.268;VQSLOD=2.4319;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:11:1.07:0,1,40	1/1:1,2:3:6.02:77,6,0	0/0:15,0:9:5.78:0,6,35	0/0:24,0:7:7.64:0,8,108	1/1:0,3:3:3.01:39,3,0	1/1:0,3:3:9.03:116,9,0	1/1:1,4:5:9.03:116,9,0	1/1:7,27:34:81.22:998,81,0	./.	1/1:0,6:6:18.06:227,18,0	1/1:3,0:3:9.03:114,9,0	1/1:3,0:3:6.02:76,6,0	1/1:0,3:3:2.88:33,3,0	1/1:0,7:7:15.05:193,15,0	1/1:0,1:1:3.01:39,3,0	1/1:1,2:3:6.02:77,6,0	0/0:23,0:23:60.21:0,60,1012	0/0:23,0:23:57.19:0,57,958	1/1:0,11:11:30.08:369,30,0	1/1:0,3:3:2.68:38,3,0	1/1:1,3:4:3.01:39,3,0	./.	0/1:0,4:4:0.29:0,0,0	1/1:1,0:1:3.01:38,3,0	1/1:0,3:3:6.02:77,6,0	1/1:2,8:10:21.07:270,21,0	1/1:0,7:7:6.02:77,6,0	1/1:2,2:4:6.02:77,6,0
chr10	29493073	.	A	ATAT	194.20	PASS	AC=2;AF=0.037;AN=54;BaseQRankSum=-0.135;DP=249;FS=0.000;HRun=0;HaplotypeScore=52.8378;InbreedingCoeff=0.4287;MQ=80.86;MQ0=2;MQRankSum=-3.237;QD=16.18;ReadPosRankSum=-0.515;VQSLOD=2.9322;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,10:12:12.04:279,12,0	0/0:2,0:2:6.01:0,6,57	0/0:12,0:7:5.93:0,6,62	0/0:20,0:9:20.95:0,21,252	0/0:3,0:3:9.02:0,9,105	0/0:4,0:4:12.02:0,12,122	0/0:4,0:4:9.01:0,9,85	0/0:32,0:32:90.15:0,90,899	0/0:2,0:2:6.02:0,6,76	0/0:9,0:9:26.80:0,27,273	0/0:5,0:5:15.03:0,15,163	0/0:10,0:10:27.08:0,27,325	0/0:4,0:4:5.79:0,6,72	0/0:10,0:10:21.02:0,21,204	0/0:2,0:2:6.01:0,6,66	0/0:4,0:4:12.03:0,12,133	0/0:23,0:23:69.23:0,69,1165	0/0:25,0:25:69.16:0,69,1095	0/0:14,0:14:36.07:0,36,372	0/0:8,0:8:17.64:0,18,219	0/0:6,0:6:12.02:0,12,129	./.	0/0:6,0:6:5.43:0,5,62	0/0:2,0:2:6.01:0,6,67	0/0:7,0:7:15.04:0,15,171	0/0:9,0:9:24.03:0,24,236	0/0:10,0:10:12.03:0,12,133	0/0:4,0:4:12.03:0,12,133
chr10	29494255	.	AG	A	2135.13	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-0.607;DP=713;FS=5.109;HRun=6;HaplotypeScore=103.9247;InbreedingCoeff=0.9979;MQ=83.44;MQ0=1;MQRankSum=-5.566;QD=25.72;ReadPosRankSum=3.664;VQSLOD=3.5268;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,48:53:99:1483,138,0	0/0:16,0:16:48.14:0,48,617	0/0:24,0:24:60.19:0,60,783	0/0:35,0:35:87.24:0,87,1101	0/0:19,0:19:48.13:0,48,598	0/0:16,0:16:48.16:0,48,626	0/0:30,0:30:87.27:0,87,1127	0/0:26,0:26:66.21:0,66,864	1/1:1,29:30:72.18:774,72,0	0/0:27,0:27:75.24:0,75,981	0/0:15,0:15:39.10:0,39,483	0/0:32,0:32:90.29:0,90,1184	0/0:22,0:22:66.21:0,66,866	0/0:21,0:21:63.18:0,63,796	0/0:35,0:35:99:0,102,1312	0/0:23,0:23:66.19:0,66,838	0/0:38,0:38:99:0,108,1415	0/0:21,0:21:63.17:0,63,798	0/0:23,0:23:69.21:0,69,879	0/0:25,0:25:72.15:0,72,883	0/0:45,0:44:99:0,114,1475	0/0:18,0:18:51.17:0,51,668	0/0:16,0:16:45.13:0,45,575	0/0:29,0:29:84.27:0,84,1105	0/0:21,0:21:60.18:0,60,775	0/0:20,0:20:60.19:0,60,785	0/0:26,0:26:69.22:0,69,908	0/0:7,0:7:21.07:0,21,276
chr10	29497040	.	AG	A	15043.71	PASS	AB=0.790;AC=54;AF=0.964;AN=56;BaseQRankSum=-2.358;DP=541;FS=0.000;HRun=4;HaplotypeScore=190.7621;InbreedingCoeff=-0.0381;MQ=63.60;MQ0=0;MQRankSum=-4.760;QD=27.81;ReadPosRankSum=2.363;VQSLOD=3.0176;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,30:36:90.22:1058,90,0	1/1:5,10:15:39.05:428,39,0	0/1:11,2:12:55.67:113,0,56	0/1:6,2:10:62.86:71,0,63	1/1:6,24:30:68.96:742,69,0	1/1:2,11:13:33.05:368,33,0	1/1:2,23:25:66.47:724,66,0	1/1:3,23:26:63.18:746,63,0	1/1:3,17:19:51.14:599,51,0	1/1:6,23:29:78.24:928,78,0	1/1:1,19:19:48.15:574,48,0	1/1:0,21:21:63.09:720,63,0	1/1:1,19:20:57.14:667,57,0	1/1:0,13:13:39.01:433,39,0	1/1:3,21:24:60.13:701,60,0	1/1:2,11:13:30.09:359,30,0	1/1:1,15:16:42.04:471,42,0	1/1:3,7:10:21.03:237,21,0	1/1:3,20:23:63.19:754,63,0	1/1:4,17:21:54.12:628,54,0	1/1:4,16:18:44.94:473,45,0	1/1:3,17:20:48.06:543,48,0	1/1:2,25:27:62.92:656,63,0	1/1:3,14:16:18.05:216,18,0	1/1:2,12:14:39.06:439,39,0	1/1:3,19:22:63.19:754,63,0	1/1:3,13:16:44.99:478,45,0	1/1:0,5:5:15:164,15,0
chr10	29497251	.	G	GCT	720.80	PASS	AC=24;AF=0.857;AN=28;BaseQRankSum=2.360;DP=57;FS=33.090;HRun=0;HaplotypeScore=11.2100;InbreedingCoeff=0.3670;MQ=125.60;MQ0=3;MQRankSum=-2.624;QD=32.76;ReadPosRankSum=-3.152;VQSLOD=1.7469;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,3:3:3.01:61,3,0	./.	0/0:13,0:10:30.09:0,30,460	0/0:16,0:10:24.05:0,24,339	1/1:1,0:1:3:25,3,0	./.	1/1:3,0:2:6:81,6,0	1/1:1,0:1:3:27,3,0	./.	1/1:1,1:3:6.01:86,6,0	./.	./.	1/1:1,0:1:3.01:48,3,0	1/1:1,0:1:3.01:48,3,0	1/1:1,0:1:3.01:57,3,0	1/1:1,0:1:3.01:49,3,0	./.	./.	1/1:1,0:1:3.01:56,3,0	1/1:0,4:4:12.04:232,12,0	./.	1/1:1,0:1:3.01:57,3,0	./.	./.	./.	./.	./.	./.
chr10	29497512	.	TTAA	T	979.60	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.231;DP=627;FS=4.142;HRun=0;HaplotypeScore=88.8998;InbreedingCoeff=0.9919;MQ=75.56;MQ0=0;MQRankSum=-0.404;QD=31.60;ReadPosRankSum=2.785;VQSLOD=3.5231;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,27:31:63.22:1074,63,0	0/0:12,0:12:36.12:0,36,826	0/0:16,0:16:18.28:0,18,971	0/0:16,0:16:41.35:0,41,854	0/0:41,0:41:99:0,105,2381	0/0:25,0:25:69.24:0,69,1571	0/0:20,0:20:60.21:0,60,1366	0/0:32,0:32:90.31:0,90,2066	0/0:15,0:15:45.15:0,45,1007	0/0:28,0:28:78.26:0,78,1701	0/0:22,0:22:54.19:0,54,1245	0/0:14,0:14:42.14:0,42,964	0/0:21,0:21:63.22:0,63,1439	0/0:19,0:19:54.17:0,54,1195	0/0:21,0:21:63.22:0,63,1415	0/0:23,0:23:66.23:0,66,1519	0/0:25,0:25:66.23:0,66,1521	0/0:18,0:18:54.19:0,54,1244	0/0:20,0:20:57.20:0,57,1280	0/0:32,0:32:96.33:0,96,2164	0/0:11,0:11:33.11:0,33,761	0/0:15,0:15:39.13:0,39,899	0/0:27,0:27:78.27:0,78,1773	0/0:20,0:20:60.21:0,60,1381	0/0:32,0:32:93.32:0,93,2142	0/0:23,0:23:69.24:0,69,1592	0/0:27,0:27:75.26:0,75,1722	0/0:21,0:21:60.21:0,60,1374
chr10	29498152	.	T	TTATA	5509.49	PASS	AB=0.552;AC=41;AF=0.820;AN=50;BaseQRankSum=-5.466;DP=189;FS=1.243;HRun=0;HaplotypeScore=31.1249;InbreedingCoeff=0.3918;MQ=68.54;MQ0=0;MQRankSum=-1.049;QD=35.55;ReadPosRankSum=1.169;VQSLOD=4.5205;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:2,0:9:21.02:0,21,195	./.	0/0:6,0:4:3.01:0,3,44	0/0:14,0:5:3.37:0,3,24	1/1:0,4:5:9.03:177,9,0	1/1:3,10:13:15.05:381,15,0	1/1:0,1:1:3.01:76,3,0	1/1:7,24:33:78.22:1497,78,0	0/0:3,0:3:3.48:0,3,33	1/1:0,4:6:15.01:228,15,0	1/1:1,1:2:3.01:76,3,0	1/1:1,0:2:3.01:73,3,0	1/1:0,3:3:9.03:228,9,0	1/1:0,3:3:6.02:152,6,0	1/1:1,3:4:3.01:76,3,0	1/1:3,0:3:3.01:39,3,0	0/1:3,0:15:3.03:105,0,3	1/1:2,0:18:39.17:177,39,0	1/1:3,0:3:6.02:111,6,0	1/1:1,3:4:6.02:146,6,0	1/1:0,5:5:9.03:228,9,0	1/1:2,0:2:3.01:44,3,0	./.	./.	1/1:0,1:2:3.01:76,3,0	1/1:0,2:2:6.02:152,6,0	1/1:0,2:2:6.02:152,6,0	1/1:1,22:26:54.17:1314,54,0
chr10	29498228	.	A	AAT	330.53	PASS	AB=0.900;AC=3;AF=0.056;AN=54;BaseQRankSum=5.413;DP=274;FS=5.282;HRun=0;HaplotypeScore=37.5621;InbreedingCoeff=0.4145;MQ=71.84;MQ0=0;MQRankSum=-1.220;QD=18.36;ReadPosRankSum=-2.568;VQSLOD=2.3915;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:45.15:0,45,585	0/0:4,0:4:12.04:0,12,156	0/1:8,0:8:28.11:29,0,28	0/0:3,0:3:2.97:0,3,20	0/0:17,0:17:42.12:0,42,532	0/0:12,0:12:24.08:0,24,312	0/0:1,0:1:3.01:0,3,39	0/0:36,0:36:96.29:0,96,1212	1/1:4,5:9:24.08:405,24,0	0/0:14,0:14:36.07:0,36,449	0/0:7,0:7:18.06:0,18,234	0/0:5,0:5:15.05:0,15,195	0/0:5,0:5:15.05:0,15,195	0/0:5,0:5:15.05:0,15,195	0/0:5,0:5:9.03:0,9,117	0/0:4,0:4:9.03:0,9,117	0/0:15,0:15:36.12:0,36,468	0/0:23,0:23:57.18:0,57,734	0/0:20,0:20:57.18:0,57,740	0/0:13,0:13:36.12:0,36,467	0/0:12,0:12:24.08:0,24,312	./.	0/0:3,0:3:9.03:0,9,117	0/0:3,0:3:9.03:0,9,117	0/0:7,0:7:18.06:0,18,234	0/0:9,0:9:27.09:0,27,351	0/0:7,0:7:21.07:0,21,273	0/0:9,0:9:15.05:0,15,195
chr10	29498251	.	GAT	G	256.61	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=4.737;DP=318;FS=3.293;HRun=0;HaplotypeScore=38.0302;InbreedingCoeff=0.4609;MQ=70.38;MQ0=0;MQRankSum=-1.844;QD=15.09;ReadPosRankSum=0.524;VQSLOD=3.1155;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,1:22:27.20:0,27,1032	0/0:5,0:5:15.05:0,15,255	0/0:8,0:7:12.04:0,12,194	0/0:5,0:4:9.03:0,9,132	0/0:16,0:16:42.13:0,42,676	0/0:13,0:13:39.12:0,39,636	0/0:3,0:3:9.03:0,9,153	0/0:37,0:37:90.26:0,90,1498	1/1:0,10:10:27.09:343,27,0	0/0:15,0:15:45.13:0,45,715	0/0:7,0:7:21.07:0,21,357	0/1:7,0:7:17.75:18,0,285	0/0:11,0:11:30.10:0,30,510	0/0:6,0:6:15.05:0,15,255	0/0:4,0:4:12.04:0,12,204	0/0:3,0:3:9.02:0,9,122	0/0:14,0:14:36.07:0,36,576	0/0:25,0:25:60.21:0,60,1012	0/0:24,0:24:62.99:0,63,1006	0/0:15,0:15:42.13:0,42,684	0/0:15,0:15:45.11:0,45,709	0/0:1,0:1:3.01:0,3,51	0/0:6,0:6:9.03:0,9,153	0/0:5,0:5:15.05:0,15,255	0/0:7,0:7:18.06:0,18,306	0/0:10,0:11:33.10:0,33,537	0/0:11,0:11:30.10:0,30,510	0/0:12,0:12:30.10:0,30,510
chr10	29499332	.	C	CT	1540.43	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.563;DP=794;FS=8.747;HRun=1;HaplotypeScore=82.1758;InbreedingCoeff=0.9990;MQ=73.68;MQ0=0;MQRankSum=-0.872;QD=39.50;ReadPosRankSum=1.745;VQSLOD=4.0258;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,132,1665	0/0:9,0:9:27.09:0,27,350	0/0:34,0:32:78.12:0,78,887	0/0:29,0:29:79.15:0,79,954	0/0:25,0:25:69.20:0,69,877	0/0:21,0:21:57.19:0,57,739	0/0:32,0:32:87.28:0,87,1128	0/0:29,0:29:84.25:0,84,1053	1/1:0,39:39:99:1635,111,0	0/0:25,0:25:75.24:0,75,973	0/0:27,0:27:78.14:0,78,961	0/0:26,0:26:78.25:0,78,1010	0/0:34,0:34:98.51:0,99,1225	0/0:30,0:30:90.24:0,90,1118	0/0:17,0:17:51.13:0,51,630	0/0:28,0:28:81.25:0,81,1036	0/0:35,0:35:99:0,105,1280	0/0:22,0:22:63.12:0,63,765	0/0:18,0:18:54.15:0,54,665	0/0:34,0:34:99:0,102,1272	0/0:59,0:59:99:0,174,2158	0/0:32,0:32:96.30:0,96,1225	0/0:17,0:17:48.16:0,48,622	0/0:29,0:29:81.21:0,81,1016	0/0:27,0:27:81.24:0,81,1024	0/0:27,0:27:78.23:0,78,966	0/0:27,0:27:72.18:0,72,886	0/0:17,0:17:51.17:0,51,661
chr10	29500662	.	C	CGT	2867.36	PASS	AB=0.863;AC=32;AF=0.640;AN=50;BaseQRankSum=-3.152;DP=518;FS=10.556;HRun=0;HaplotypeScore=86.9184;InbreedingCoeff=-0.3617;MQ=63.53;MQ0=12;MQRankSum=2.077;QD=6.49;ReadPosRankSum=-0.121;VQSLOD=1.9626;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:35,0:36:58.45:120,0,58	1/1:6,4:10:9.03:135,9,0	./.	./.	0/1:11,2:12:27.03:39,0,27	0/0:15,0:17:27.64:0,28,223	0/1:14,9:23:7.75:123,0,8	0/1:23,0:23:0.26:8,0,0	./.	1/1:14,2:16:26.99:290,27,0	0/1:8,4:11:23.28:81,0,23	0/1:10,4:14:55.78:77,0,56	0/1:12,1:12:60.20:60,0,66	0/1:10,0:9:27.50:27,0,74	0/1:13,2:15:20.52:101,0,21	1/1:4,6:10:6.02:90,6,0	1/1:35,0:35:32.94:312,33,0	1/1:24,0:23:14.83:121,15,0	0/1:11,4:14:13.44:146,0,13	0/1:16,6:22:14.99:208,0,15	0/1:24,0:24:35.77:36,0,44	0/1:18,2:19:2.10:88,0,2	0/1:16,1:18:19.13:87,0,19	0/1:21,10:32:42.27:286,0,42	1/1:13,2:15:17.37:189,17,0	1/1:17,0:17:15.03:184,15,0	0/1:9,5:14:47.37:162,0,47	1/1:6,1:7:3.01:45,3,0
chr10	29500664	.	T	TGTGC	998.83	PASS	AB=0.985;AC=8;AF=0.143;AN=56;BaseQRankSum=0.192;DP=526;FS=7.047;HRun=0;HaplotypeScore=111.0333;InbreedingCoeff=0.3358;MQ=60.47;MQ0=13;MQRankSum=2.304;QD=7.40;ReadPosRankSum=2.342;VQSLOD=1.2928;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:31.71:0,32,440	0/0:11,0:11:16.14:0,16,108	0/0:26,0:8:11.89:0,12,106	0/0:29,0:15:42.02:0,42,411	0/0:12,0:11:15.46:0,15,156	0/0:17,0:17:8.86:0,9,447	0/0:21,0:21:31.38:0,31,260	0/0:24,0:24:10.37:0,10,300	0/0:4,0:3:5.88:0,6,36	0/1:15,0:15:27.62:28,0,93	0/0:12,0:11:9.95:0,10,97	0/0:14,0:14:23.47:0,23,239	0/0:13,0:12:6.49:0,6,242	0/0:10,0:9:9.04:0,9,233	0/0:16,0:16:29.47:0,29,248	0/0:11,0:11:12.27:0,12,99	1/1:7,28:37:32.63:650,33,0	1/1:4,19:27:18.04:372,18,0	0/0:15,0:14:22.36:0,22,192	0/0:20,0:20:29.33:0,29,258	0/0:25,0:25:38.52:0,39,360	0/0:22,0:19:26.84:0,27,202	0/1:19,0:19:26.55:27,0,97	0/0:32,0:32:50.75:0,51,454	0/1:16,0:15:50:50,0,75	0/1:19,0:18:19.10:19,0,257	0/0:14,0:14:25.83:0,26,228	0/0:7,0:7:15.43:0,15,121
chr10	29500827	.	TTCTCTCTCTC	T	1063.78	PASS	AB=1.000;AC=24;AF=0.632;AN=38;BaseQRankSum=-0.947;DP=361;FS=3.772;HRun=0;HaplotypeScore=86.7704;InbreedingCoeff=0.2858;MQ=65.77;MQ0=25;MQRankSum=2.476;QD=7.29;ReadPosRankSum=2.642;VQSLOD=1.4508;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:8:3.48:0,3,40	./.	0/0:44,0:13:0:0,0,0	0/0:52,0:20:2.98:0,3,22	./.	1/1:14,0:13:9.01:202,9,0	0/0:15,0:13:3.22:0,3,13	0/1:16,0:15:3.04:31,0,3	0/0:8,0:8:3.48:0,3,79	1/1:8,1:9:11.18:295,11,0	./.	1/1:8,0:7:2.39:49,2,0	1/1:4,0:4:3.01:44,3,0	1/1:7,0:7:6.36:91,6,0	1/1:10,0:10:2.40:88,2,0	0/0:9,2:11:3.01:0,3,39	0/1:12,0:12:13.93:47,0,14	./.	./.	./.	./.	1/1:10,0:11:6.01:101,6,0	./.	1/1:16,0:16:2.99:24,3,0	1/1:11,0:11:3.01:50,3,0	1/1:10,0:10:8.32:84,8,0	1/1:18,0:15:4.70:76,5,0	./.
chr10	29500856	.	T	TCA	320.97	PASS	AB=0.924;AC=19;AF=0.432;AN=44;BaseQRankSum=3.496;DP=233;FS=8.849;HRun=0;HaplotypeScore=55.2152;InbreedingCoeff=0.1730;MQ=30.62;MQ0=22;MQRankSum=0.662;QD=3.00;ReadPosRankSum=-1.008;VQSLOD=0.4818;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:9:6.46:0,6,49	0/0:2,0:2:2.96:0,3,19	0/0:8,0:1:2.97:0,3,20	0/0:19,0:5:5.73:0,6,34	./.	1/1:13,0:11:5.16:58,5,0	0/1:10,0:8:12.04:12,0,12	0/0:13,0:12:17.53:0,18,205	0/0:6,0:6:6.77:0,7,38	0/1:10,0:10:39.33:39,0,45	./.	1/1:7,0:6:5.94:43,6,0	1/1:3,0:3:4.48:20,4,0	1/1:6,1:7:2.44:72,2,0	1/1:8,1:9:4.81:30,5,0	0/1:9,1:9:24.48:40,0,24	0/0:9,0:8:6.36:0,6,37	0/0:12,0:10:28.74:0,29,177	0/0:3,0:1:2.98:0,3,21	./.	./.	0/0:6,0:6:1.90:0,2,6	./.	1/1:9,0:9:2.72:24,3,0	1/1:8,0:8:3:25,3,0	0/1:5,2:7:35.88:44,0,36	0/1:13,1:11:18.15:53,0,18	./.
chr10	29500866	.	T	TCACACACACA	2691.72	PASS	AB=1.000;AC=38;AF=0.864;AN=44;BaseQRankSum=0.438;DP=228;FS=2.642;HRun=0;HaplotypeScore=76.8759;InbreedingCoeff=0.3199;MQ=41.57;MQ0=15;MQRankSum=-1.377;QD=14.63;ReadPosRankSum=1.021;VQSLOD=1.9100;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:10:6.02:78,6,0	1/1:2,0:2:0.47:1,0,0	0/1:9,0:2:4.15:4,0,85	0/0:12,0:7:2.79:0,3,69	./.	1/1:15,0:13:5.98:115,6,0	1/1:7,0:6:6.02:127,6,0	1/1:14,0:13:9.03:180,9,0	0/1:3,0:3:0:0,0,0	1/1:10,0:10:8.49:152,8,0	./.	1/1:6,0:5:6.02:139,6,0	1/1:3,0:3:3.01:97,3,0	1/1:5,0:5:9.03:176,9,0	1/1:11,0:11:4.51:106,5,0	1/1:13,0:12:9.03:156,9,0	1/1:3,5:11:8.24:158,8,0	1/1:16,2:16:13.03:762,13,0	./.	./.	0/1:2,0:2:0:0,0,0	1/1:8,0:8:5.60:42,6,0	./.	1/1:8,0:8:5.70:104,6,0	0/1:5,0:5:0:0,0,0	1/1:9,0:9:17.27:292,17,0	1/1:10,0:7:6.02:101,6,0	./.
chr10	29500889	.	CGA	C	104.05	PASS	AB=0.961;AC=12;AF=0.222;AN=54;BaseQRankSum=0.618;DP=294;FS=16.790;HRun=0;HaplotypeScore=103.0672;InbreedingCoeff=-0.1995;MQ=59.90;MQ0=8;MQRankSum=-1.519;QD=0.95;ReadPosRankSum=2.111;VQSLOD=0.9557;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:13,1:13:12:0,12,165	0/0:2,1:3:2.49:0,2,51	0/0:38,0:20:0.69:0,1,443	0/0:46,1:25:7.42:0,7,522	0/0:9,0:9:2.92:0,3,17	0/0:12,0:10:11.60:0,12,70	0/1:10,0:10:3.19:3,0,90	0/1:15,0:15:9.81:10,0,364	./.	0/1:7,0:6:29.90:30,0,48	0/0:5,0:5:5.98:0,6,72	0/1:7,0:6:5:5,0,61	0/0:3,0:3:8.31:0,8,49	1/1:5,0:6:5.33:27,5,0	0/1:8,0:8:10.42:26,0,10	0/1:10,2:11:37.46:37,0,51	0/0:14,0:14:16.81:0,17,205	0/1:20,0:19:26.49:26,0,619	0/0:2,0:1:3:0,3,26	0/0:4,0:4:8.49:0,8,47	0/0:3,0:3:2.82:0,3,20	0/0:9,0:9:15.31:0,15,100	0/0:6,0:6:2.97:0,3,21	0/1:9,0:9:19.08:21,0,19	0/0:7,0:7:11.55:0,12,70	0/1:12,0:12:21:21,0,217	0/0:8,0:7:0.25:0,0,43	0/1:2,1:3:11.83:31,0,12
chr10	29500899	.	AAGAC	A	3934.61	PASS	AB=0.583;AC=41;AF=0.759;AN=54;BaseQRankSum=2.974;DP=289;FS=27.761;HRun=0;HaplotypeScore=99.2528;InbreedingCoeff=0.6978;MQ=62.44;MQ0=5;MQRankSum=-5.701;QD=27.91;ReadPosRankSum=-2.493;VQSLOD=1.3915;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:20.10:0,20,469	1/1:1,1:2:6.01:67,6,0	0/0:41,0:21:47.93:0,48,770	0/0:56,0:31:46.79:0,47,870	1/1:1,5:6:8.06:85,8,0	1/1:1,9:9:15.04:227,15,0	1/1:1,7:8:18.06:277,18,0	1/1:0,13:13:36.09:592,36,0	./.	1/1:1,7:7:18.05:269,18,0	1/1:2,2:4:8.95:82,9,0	1/1:2,6:8:19.56:242,20,0	1/1:0,3:3:6:103,6,0	1/1:3,4:7:14.70:148,15,0	0/1:2,5:7:15.46:116,0,15	1/1:3,7:9:18.06:261,18,0	0/0:15,0:15:27.09:0,27,682	0/0:17,0:17:48.64:0,49,1105	1/1:1,1:1:3.01:53,3,0	1/1:1,4:5:12:161,12,0	0/0:0,3:3:0:0,0,0	1/1:2,7:9:12.04:161,12,0	1/1:0,6:6:12.04:159,12,0	1/1:2,6:9:5.93:84,6,0	1/1:2,4:6:12.04:184,12,0	1/1:3,6:9:23.98:351,24,0	1/1:1,5:5:15.05:242,15,0	1/1:2,1:3:5.99:72,6,0
chr10	29500909	.	GACAC	G	3113.91	PASS	AC=42;AF=0.778;AN=54;BaseQRankSum=5.631;DP=280;FS=16.294;HRun=0;HaplotypeScore=98.8188;InbreedingCoeff=0.7326;MQ=65.51;MQ0=2;MQRankSum=-6.052;QD=24.14;ReadPosRankSum=-1.497;VQSLOD=1.9321;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:13:21.06:0,21,341	1/1:0,1:1:3.01:36,3,0	0/0:47,0:25:24.07:0,24,480	0/0:56,0:32:36.14:0,36,930	1/1:1,5:6:5.60:68,6,0	1/1:2,8:9:14.96:175,15,0	1/1:3,7:10:21.07:296,21,0	1/1:7,6:13:18.06:279,18,0	./.	1/1:0,8:7:18.06:262,18,0	1/1:1,2:3:6.02:82,6,0	1/1:0,8:8:17.08:219,17,0	1/1:1,2:3:6.02:92,6,0	1/1:0,5:5:15.05:215,15,0	1/1:4,4:8:4.51:124,5,0	1/1:3,6:8:21.05:258,21,0	0/0:14,0:15:26.83:0,27,608	0/0:14,0:17:35.29:0,35,655	1/1:0,2:2:6.02:98,6,0	1/1:0,2:4:12:131,12,0	0/0:2,1:3:0:0,0,0	1/1:3,4:7:12.04:141,12,0	1/1:0,6:6:12.03:138,12,0	1/1:5,4:9:6.01:74,6,0	1/1:0,3:4:12.03:146,12,0	1/1:2,4:6:12.04:183,12,0	1/1:0,5:5:15.05:216,15,0	1/1:1,1:2:4.26:48,4,0
chr10	29500988	.	GGA	G	39.21	PASS	AB=0.946;AC=13;AF=0.232;AN=56;BaseQRankSum=5.442;DP=384;FS=1.609;HRun=0;HaplotypeScore=73.8611;InbreedingCoeff=-0.0247;MQ=56.58;MQ0=15;MQRankSum=-0.671;QD=0.38;ReadPosRankSum=2.156;VQSLOD=1.5399;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:10:16.15:0,16,167	0/1:4,3:7:32.67:33,0,118	0/0:54,0:17:20.69:0,21,400	0/0:73,1:22:1.17:0,1,322	0/0:8,0:7:16.30:0,16,237	0/0:10,0:10:12.04:0,12,186	0/1:16,0:15:44.99:45,0,168	0/1:14,0:12:17.42:17,0,390	1/1:5,0:5:3.92:18,4,0	0/0:9,0:9:24.08:0,24,419	0/0:5,0:5:12:0,12,164	0/1:5,0:3:1.55:2,0,67	0/0:6,0:5:2.34:0,2,90	0/0:13,0:12:7.01:0,7,233	0/0:8,0:8:9.03:0,9,136	0/0:8,0:8:4.14:0,4,142	0/1:8,1:9:4.97:5,0,141	0/0:9,0:8:4.40:0,4,224	0/0:12,0:8:16.29:0,16,299	0/1:12,0:11:4.46:4,0,349	0/0:12,0:12:33.07:0,33,471	0/0:15,1:13:23.43:0,23,428	0/0:8,1:9:6.33:0,6,144	0/1:11,0:11:9.54:10,0,219	0/1:11,0:11:18.58:19,0,311	0/0:15,0:15:39.13:0,39,618	0/1:10,1:10:1.40:1,0,139	1/1:1,0:1:2.96:19,3,0
chr10	29501019	.	AAGG	A	135.91	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=3.012;DP=430;FS=10.202;HRun=0;HaplotypeScore=83.5705;InbreedingCoeff=0.5894;MQ=44.22;MQ0=9;MQRankSum=-2.045;QD=8.49;ReadPosRankSum=0.750;VQSLOD=2.1630;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,5:7:15.05:223,15,0	0/1:7,0:7:3.92:4,0,171	0/0:33,0:10:15.02:0,15,272	0/0:42,0:12:8.78:0,9,107	0/0:12,0:12:33.07:0,33,642	0/0:20,0:18:36.05:0,36,638	0/0:19,0:18:36.41:0,36,657	0/0:24,0:24:48.15:0,48,886	1/1:1,0:1:0.89:2,1,0	0/0:15,0:14:42.14:0,42,867	0/0:9,0:9:24.02:0,24,403	0/0:11,0:9:27.01:0,27,477	0/0:8,0:7:20.99:0,21,350	0/0:16,0:15:32.48:0,32,581	0/0:12,0:12:17.85:0,18,376	0/0:14,0:14:32.95:0,33,519	0/0:8,0:8:21.04:0,21,366	0/0:11,0:10:21.04:0,21,397	0/0:10,0:9:21.03:0,21,370	0/0:19,0:18:48.14:0,48,902	0/0:26,0:25:63.16:0,63,1217	0/0:23,0:20:57.03:0,57,1018	0/0:9,0:9:11.97:0,12,209	0/0:20,0:19:45.15:0,45,896	0/0:13,0:13:36.01:0,36,657	0/0:23,0:23:54.14:0,54,1018	0/0:16,0:15:24.01:0,24,458	0/0:1,0:1:3.01:0,3,31
chr10	29501090	.	AAGG	A	4110.57	PASS	AB=1.000;AC=38;AF=0.826;AN=46;BaseQRankSum=-4.423;DP=334;FS=6.755;HRun=0;HaplotypeScore=50.9762;InbreedingCoeff=0.5431;MQ=29.35;MQ0=90;MQRankSum=1.446;QD=15.00;ReadPosRankSum=-2.565;VQSLOD=1.4973;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	1/1:5,0:2:3.01:49,3,0	./.	./.	1/1:17,0:10:26.95:326,27,0	1/1:16,0:12:23.91:256,24,0	1/1:17,0:5:11.98:120,12,0	1/1:6,0:2:4.55:29,5,0	./.	0/1:17,0:12:99:208,0,136	1/1:9,2:10:21:252,21,0	1/1:11,0:8:18.53:232,19,0	1/1:12,0:4:8.99:96,9,0	1/1:17,0:9:24.01:280,24,0	1/1:3,0:3:5.95:56,6,0	1/1:9,0:7:15.05:194,15,0	0/1:12,0:8:10.45:10,0,69	0/0:11,0:7:6.32:0,6,56	1/1:11,0:8:20.30:198,20,0	1/1:13,0:11:26.91:290,27,0	1/1:37,0:27:36.85:536,37,0	1/1:23,1:16:32.82:364,33,0	1/1:11,0:7:14.69:161,15,0	1/1:15,0:12:23.50:260,23,0	1/1:8,2:8:20.16:193,20,0	0/0:23,0:18:15.96:0,16,424	0/0:8,0:7:11.93:0,12,132	./.
chr10	29501134	.	GGAGGAGGAT	G	2131.01	PASS	AB=1.000;AC=41;AF=0.854;AN=48;BaseQRankSum=-3.560;DP=265;FS=12.179;HRun=0;HaplotypeScore=53.2123;InbreedingCoeff=0.0264;MQ=39.12;MQ0=61;MQRankSum=-1.123;QD=8.56;ReadPosRankSum=2.272;VQSLOD=0.0892;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:10,0:3:2.96:19,3,0	./.	0/1:35,0:6:9.31:9,0,68	0/1:20,0:5:21.08:21,0,21	1/1:10,2:9:5.95:76,6,0	1/1:6,0:6:11.90:120,12,0	1/1:9,0:7:11.91:119,12,0	1/1:10,0:8:23.93:199,24,0	./.	1/1:11,1:8:11.52:97,12,0	1/1:2,3:5:3.01:58,3,0	1/1:4,0:3:2.97:20,3,0	0/0:8,0:1:0:0,0,0	1/1:8,0:2:2.97:20,3,0	./.	1/1:3,0:2:2.97:20,3,0	1/1:13,0:9:14.95:194,15,0	1/1:8,0:6:2.98:22,3,0	1/1:4,1:4:8.97:133,9,0	1/1:2,7:7:5.98:102,6,0	1/1:25,0:18:12.95:185,13,0	1/1:12,1:7:5.96:46,6,0	1/1:6,3:8:11.99:254,12,0	1/1:8,0:6:5.91:38,6,0	1/1:7,3:9:17.96:363,18,0	0/1:15,0:12:22.42:121,0,22	0/0:1,0:1:0.47:0,0,1	./.
chr10	29504943	.	GA	G	546.34	PASS	AC=4;AF=0.074;AN=54;BaseQRankSum=4.468;DP=301;FS=2.893;HRun=8;HaplotypeScore=31.1106;InbreedingCoeff=0.7792;MQ=65.24;MQ0=0;MQRankSum=0.035;QD=17.62;ReadPosRankSum=2.544;VQSLOD=2.9538;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:60.17:0,60,713	0/0:7,0:7:18.06:0,18,217	0/0:12,0:11:16.83:0,17,170	0/0:4,0:4:6.02:0,6,68	0/0:16,0:16:39.12:0,39,471	0/0:11,0:11:33.10:0,33,399	0/0:7,0:7:21.06:0,21,252	0/0:28,0:28:72.20:0,72,848	0/0:1,0:4:8.63:0,9,44	0/0:9,0:9:27.07:0,27,308	0/0:7,0:7:21.05:0,21,242	0/0:6,0:6:18.04:0,18,202	0/0:7,0:7:21.02:0,21,236	0/0:13,0:13:36.11:0,36,432	0/0:1,0:1:3.01:0,3,36	0/0:14,0:14:39.06:0,39,433	1/1:2,12:14:36.05:348,36,0	1/1:3,14:17:33.05:319,33,0	0/0:19,0:18:48.15:0,48,579	0/0:13,0:13:33.10:0,33,399	0/0:2,0:2:6.02:0,6,72	./.	0/0:7,0:7:15.05:0,15,181	0/0:6,0:5:15.05:0,15,181	0/0:18,0:18:54.17:0,54,652	0/0:18,0:18:51.16:0,51,615	0/0:9,0:9:21.06:0,21,254	0/0:11,0:11:33.10:0,33,399
chr10	29505168	.	CA	C	3983.89	PASS	AB=0.689;AC=43;AF=0.768;AN=56;BaseQRankSum=-2.277;DP=410;FS=18.643;HRun=14;HaplotypeScore=70.4586;InbreedingCoeff=-0.1099;MQ=60.86;MQ0=22;MQRankSum=-1.997;QD=10.11;ReadPosRankSum=1.976;VQSLOD=1.3354;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,13:27:24.84:318,25,0	0/1:3,4:9:33.30:71,0,33	0/0:16,0:7:2.42:0,2,78	0/1:13,1:4:8.01:8,0,34	0/1:6,8:12:8.77:85,0,9	1/1:4,8:12:28.77:189,29,0	0/1:8,6:12:2.86:121,0,3	1/1:14,12:27:24.65:254,25,0	0/1:5,10:14:43.12:132,0,43	1/1:5,12:17:16.76:257,17,0	0/1:5,5:10:4.37:106,0,4	1/1:5,6:11:23.69:158,24,0	0/1:8,6:14:3.56:113,0,4	1/1:5,8:13:23.53:162,24,0	1/1:8,4:12:26.36:173,26,0	1/1:5,6:11:22.38:137,22,0	1/1:11,19:29:26.53:255,27,0	1/1:5,9:13:17.36:112,17,0	0/1:9,5:15:23.96:137,0,24	0/1:3,2:4:16.87:36,0,17	1/1:5,3:7:8.86:62,9,0	1/1:1,4:6:13.93:88,14,0	1/1:0,4:4:11.90:82,12,0	1/1:5,8:13:23.71:161,24,0	1/1:7,9:16:10.07:198,10,0	1/1:11,17:29:39.06:363,39,0	0/1:7,7:15:20.94:154,0,21	0/1:8,3:6:12.50:53,0,12
chr10	29505199	.	T	TA	6528.88	PASS	AB=0.825;AC=43;AF=0.768;AN=56;BaseQRankSum=-3.606;DP=492;FS=28.692;HRun=11;HaplotypeScore=86.7639;InbreedingCoeff=0.7001;MQ=69.01;MQ0=0;MQRankSum=-0.698;QD=16.61;ReadPosRankSum=0.744;VQSLOD=3.7629;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,1:30:30.82:0,31,384	1/1:5,6:11:23.96:227,24,0	0/1:18,0:12:23.78:36,0,24	0/0:11,0:8:10.33:0,10,60	1/1:6,8:14:7.69:241,8,0	0/1:13,3:16:0.55:122,0,1	1/1:5,10:15:27.04:268,27,0	1/1:16,13:29:42.04:415,42,0	0/0:17,0:17:32.83:0,33,254	1/1:9,16:25:42.90:396,43,0	1/1:5,11:16:12.82:279,13,0	0/1:8,7:15:5.24:118,0,5	1/1:6,14:20:6.88:245,7,0	1/1:4,13:17:18.42:343,18,0	1/1:4,11:15:33.54:336,34,0	1/1:4,8:12:23.97:225,24,0	0/0:24,0:26:38.32:0,38,268	0/0:14,0:14:23.73:0,24,175	1/1:9,15:24:24.91:426,25,0	1/1:3,4:7:15.02:147,15,0	1/1:2,8:11:17.87:167,18,0	1/1:4,8:12:20.96:199,21,0	1/1:3,8:11:24.05:244,24,0	1/1:5,10:16:28.02:376,28,0	1/1:8,11:20:40.19:393,40,0	1/1:14,22:36:66.57:657,67,0	1/1:8,15:23:51:484,51,0	1/1:1,6:8:8.77:182,9,0
chr10	29506195	.	T	TG	11832.60	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-13.563;DP=608;FS=7.584;HRun=7;HaplotypeScore=68.7476;InbreedingCoeff=0.9958;MQ=97.17;MQ0=0;MQRankSum=-6.780;QD=27.84;ReadPosRankSum=2.473;VQSLOD=5.6171;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,105,1010	1/1:2,7:9:21.06:254,21,0	0/0:34,0:34:61.57:0,62,661	0/0:33,0:34:79.63:0,80,732	1/1:3,17:20:48.15:577,48,0	1/1:3,16:19:45.10:527,45,0	1/1:4,19:23:51.16:614,51,0	1/1:8,16:24:42.12:496,42,0	0/0:21,0:21:57.08:0,57,550	1/1:4,17:21:51.12:600,51,0	1/1:0,17:17:42.13:506,42,0	1/1:3,16:19:45.13:532,45,0	1/1:5,16:21:42.11:495,42,0	1/1:2,15:18:44.97:521,45,0	1/1:3,20:23:51.16:615,51,0	1/1:4,15:19:39.12:471,39,0	0/0:30,0:30:84.13:0,84,811	0/0:26,0:26:63.02:0,63,592	1/1:3,15:18:45.14:543,45,0	1/1:0,8:8:18.06:217,18,0	1/1:6,21:27:54.17:652,54,0	1/1:2,18:20:54.17:651,54,0	1/1:1,7:8:17.89:211,18,0	1/1:2,25:27:66.67:798,67,0	1/1:1,15:16:39.12:471,39,0	1/1:2,24:26:43.18:775,43,0	1/1:2,22:24:60.18:725,60,0	1/1:1,17:18:48.15:580,48,0
chr10	29506566	.	AGTGTGT	A	2760.38	PASS	AB=0.883;AC=39;AF=0.886;AN=44;BaseQRankSum=-0.861;DP=401;FS=5.960;HRun=0;HaplotypeScore=79.4081;InbreedingCoeff=0.1830;MQ=56.24;MQ0=35;MQRankSum=2.041;QD=9.29;ReadPosRankSum=-0.090;VQSLOD=1.0975;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:15:18.04:0,18,381	./.	./.	./.	1/1:12,13:25:3.01:52,3,0	./.	1/1:11,3:16:12:230,12,0	1/1:20,0:20:0.52:53,1,0	0/1:11,0:11:0:0,0,0	1/1:9,7:16:14.28:268,14,0	./.	1/1:10,0:6:9.03:150,9,0	1/1:7,2:9:6.49:101,6,0	1/1:5,0:11:9.49:146,9,0	0/1:13,0:15:9.23:44,0,9	1/1:5,0:5:9.03:181,9,0	0/1:24,0:23:74.59:186,0,75	1/1:13,0:13:12.04:202,12,0	1/1:11,0:11:5.90:44,6,0	1/1:15,0:14:2.94:18,3,0	1/1:11,0:7:9.02:141,9,0	1/1:6,0:6:3.01:46,3,0	./.	1/1:16,0:14:24.08:476,24,0	1/1:10,0:12:3.01:60,3,0	1/1:8,4:11:12.04:224,12,0	1/1:15,0:11:12.04:182,12,0	1/1:14,0:13:5.98:67,6,0
chr10	29506867	.	C	CAAAA	13800.94	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-1.029;DP=497;FS=15.242;HRun=11;HaplotypeScore=133.8989;InbreedingCoeff=0.8008;MQ=71.30;MQ0=0;MQRankSum=-4.960;QD=29.87;ReadPosRankSum=-1.140;VQSLOD=1.6467;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,0:36:58.96:450,59,0	1/1:2,4:7:12.04:260,12,0	0/0:17,0:17:11.35:0,11,194	0/0:15,0:15:17.90:0,18,313	1/1:14,15:32:57.12:859,57,0	1/1:1,11:15:30.10:619,30,0	1/1:7,4:14:9.03:208,9,0	1/1:14,5:21:42.14:797,42,0	1/1:3,0:10:14.96:166,15,0	1/1:7,8:19:42.12:699,42,0	1/1:7,13:24:58.75:1058,59,0	1/1:7,11:19:21.07:440,21,0	1/1:11,9:24:27.09:559,27,0	1/1:5,6:13:18.06:382,18,0	1/1:6,8:17:24.08:480,24,0	1/1:5,7:13:24.08:461,24,0	1/1:13,2:21:53.39:953,53,0	1/1:9,0:13:27.08:433,27,0	1/1:8,1:23:54.13:960,54,0	1/1:4,9:15:33.11:590,33,0	1/1:3,6:10:9.03:145,9,0	1/1:2,1:6:15.01:233,15,0	1/1:4,3:9:6.02:139,6,0	1/1:5,11:18:31.35:576,31,0	1/1:8,8:16:6.48:79,6,0	1/1:7,13:22:51.17:977,51,0	1/1:9,18:29:39.11:791,39,0	1/1:6,7:15:21.07:486,21,0
chr10	29507289	.	AAT	A	9098.74	PASS	AC=50;AF=0.926;AN=54;BaseQRankSum=-0.702;DP=332;FS=0.000;HRun=0;HaplotypeScore=95.4226;InbreedingCoeff=0.5895;MQ=54.67;MQ0=2;MQRankSum=-1.455;QD=28.43;ReadPosRankSum=2.375;VQSLOD=6.1973;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,10:12:30.05:367,30,0	1/1:1,4:5:12.04:154,12,0	0/0:4,0:1:2.22:0,2,7	0/0:7,0:6:2.10:0,2,8	1/1:5,20:25:50.95:599,51,0	1/1:2,9:11:30.06:368,30,0	1/1:2,3:5:8.99:97,9,0	1/1:9,27:36:84.24:1063,84,0	1/1:3,5:8:23.97:254,24,0	1/1:3,14:17:45.13:563,45,0	1/1:5,14:18:45.02:522,45,0	1/1:2,2:4:5.98:58,6,0	1/1:4,8:12:29.91:295,30,0	1/1:3,6:9:24.04:291,24,0	1/1:1,5:5:15.01:175,15,0	1/1:0,3:3:9.03:116,9,0	1/1:3,7:10:20.98:233,21,0	1/1:1,10:11:30.07:368,30,0	1/1:2,10:12:30.10:385,30,0	1/1:4,14:18:47.95:540,48,0	1/1:1,3:4:8.90:60,9,0	1/1:2,3:5:11.95:117,12,0	1/1:3,9:12:32.93:337,33,0	./.	1/1:3,17:20:50.95:562,51,0	1/1:3,17:20:51.12:637,51,0	1/1:8,15:23:48.04:551,48,0	1/1:3,10:13:38.93:385,39,0
chr10	29507315	.	CTATATATA	C	13363.68	PASS	AB=0.587;AC=52;AF=0.929;AN=56;BaseQRankSum=-1.090;DP=328;FS=0.000;HRun=0;HaplotypeScore=134.1060;InbreedingCoeff=0.2006;MQ=55.51;MQ0=0;MQRankSum=1.462;QD=42.42;ReadPosRankSum=1.982;VQSLOD=4.6673;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:5,0:13:16.30:16,0,48	1/1:2,2:4:6.02:159,6,0	1/1:8,0:4:1.72:4,2,0	0/0:12,0:7:1.10:0,1,44	1/1:6,17:23:29.71:557,30,0	1/1:0,8:8:23.96:432,24,0	1/1:1,6:7:12:258,12,0	1/1:19,11:30:39.13:976,39,0	0/1:2,0:10:4.32:150,0,4	1/1:5,19:24:60.12:1499,60,0	1/1:4,18:22:42.03:908,42,0	1/1:1,2:3:9.03:238,9,0	1/1:2,11:13:33.07:807,33,0	1/1:1,7:8:20.99:411,21,0	1/1:3,6:9:21.07:453,21,0	1/1:1,5:6:15.04:318,15,0	1/1:3,0:5:3.01:56,3,0	1/1:5,0:10:15.02:245,15,0	1/1:7,5:12:23.74:464,24,0	1/1:2,14:16:38.96:794,39,0	1/1:1,1:2:3.01:79,3,0	1/1:0,5:5:15.05:397,15,0	1/1:1,9:10:24:488,24,0	1/1:0,1:1:3.01:79,3,0	1/1:3,18:21:54.18:1414,54,0	1/1:8,9:17:27.09:715,27,0	1/1:4,14:18:39.09:939,39,0	1/1:3,7:10:21.07:509,21,0
chr10	29508704	.	A	ATG	596.50	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=1.307;DP=730;FS=13.832;HRun=0;HaplotypeScore=101.6774;InbreedingCoeff=0.8146;MQ=61.24;MQ0=8;MQRankSum=-3.587;QD=17.04;ReadPosRankSum=0.044;VQSLOD=2.8573;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:57.46:0,57,865	0/0:15,0:15:36.10:0,36,464	0/0:13,1:4:6.02:0,6,74	0/0:26,0:13:7.45:0,7,34	0/0:25,0:25:72.21:0,72,926	0/0:33,0:33:99:0,99,1300	0/0:19,0:19:46.02:0,46,584	0/0:44,0:43:99:0,114,1423	0/0:23,0:23:69.21:0,69,900	0/0:33,0:32:84.26:0,84,1089	0/0:25,0:25:69.23:0,69,917	0/0:23,0:23:63.18:0,63,807	0/0:34,0:34:93.28:0,93,1204	0/0:32,0:32:90.24:0,90,1134	0/0:38,0:38:99:0,108,1375	0/0:24,0:24:66.20:0,66,862	1/1:5,11:14:20.94:362,21,0	1/1:11,8:19:3.13:341,3,0	0/0:21,0:20:54.17:0,54,706	0/0:35,0:35:99:0,99,1301	0/0:27,0:27:71.99:0,72,922	0/0:23,0:23:63.15:0,63,789	0/0:25,0:25:66.18:0,66,844	0/0:24,0:24:63.13:0,63,785	0/0:15,0:15:44.50:0,44,551	0/0:41,0:41:99:0,111,1437	0/0:35,0:35:90.24:0,90,1148	0/0:9,0:9:24.06:0,24,302
chr10	29508744	.	G	GTGTATATGT	803.93	PASS	AB=0.867;AC=4;AF=0.071;AN=56;BaseQRankSum=0.098;DP=676;FS=4.940;HRun=0;HaplotypeScore=185.3038;InbreedingCoeff=0.6111;MQ=60.33;MQ0=0;MQRankSum=-3.898;QD=21.73;ReadPosRankSum=-2.154;VQSLOD=2.4152;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:62.87:0,63,1811	0/0:13,0:13:36.12:0,36,993	0/0:10,0:6:12.04:0,12,299	0/1:12,0:5:1.18:1,0,69	0/0:25,0:25:69.22:0,69,1879	0/0:26,0:26:66.21:0,66,1824	0/0:22,0:22:60.19:0,60,1576	0/0:41,0:41:93.32:0,93,2371	0/0:27,0:27:75.26:0,75,2145	0/0:40,0:40:99:0,108,2933	0/0:24,0:24:69.24:0,69,1891	0/0:18,0:18:45.15:0,45,1139	0/0:21,0:21:57.20:0,57,1585	0/0:30,0:30:72.25:0,72,1875	0/0:37,0:37:99:0,102,2720	0/0:19,0:19:51.18:0,51,1404	1/1:9,4:14:15.52:596,16,0	0/1:7,3:11:4.51:310,0,5	0/0:24,0:24:54.18:0,54,1486	0/0:35,0:35:96.33:0,96,2561	0/0:24,0:24:56.91:0,57,1580	0/0:21,0:21:57.18:0,57,1553	0/0:30,0:30:84.29:0,84,2288	0/0:24,0:24:57.19:0,57,1437	0/0:20,0:20:54.19:0,54,1550	0/0:34,0:34:93.31:0,93,2468	0/0:39,0:39:99:0,114,2847	0/0:7,0:7:21.07:0,21,612
chr10	29509012	.	G	GAAAA	701.21	PASS	AB=0.909;AC=5;AF=0.089;AN=56;BaseQRankSum=-1.240;DP=598;FS=0.869;HRun=10;HaplotypeScore=110.8636;InbreedingCoeff=0.6978;MQ=75.94;MQ0=0;MQRankSum=-2.523;QD=18.95;ReadPosRankSum=-0.770;VQSLOD=1.3277;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,122,1702	0/0:4,0:4:8.99:0,9,127	0/0:13,0:13:17.95:0,18,217	0/0:22,0:21:30.01:0,30,432	0/0:21,0:21:44.95:0,45,599	0/0:17,0:17:48.14:0,48,679	0/0:23,0:23:66.18:0,66,915	0/0:30,0:32:20.56:0,21,686	0/0:15,0:15:39.12:0,39,552	0/0:29,0:30:79.44:0,79,1106	0/0:15,0:15:33.06:0,33,467	0/0:21,0:21:44.98:0,45,618	0/0:21,0:21:50.98:0,51,680	0/0:29,0:29:63.09:0,63,891	0/0:22,0:22:54.14:0,54,746	0/0:21,0:21:63.18:0,63,856	1/1:4,15:23:36.12:781,36,0	1/1:4,0:4:3:27,3,0	0/0:23,0:24:60.56:0,61,810	0/0:21,0:22:53.51:0,54,655	0/0:13,0:13:33:0,33,439	0/0:26,0:26:56.70:0,57,755	0/0:24,0:24:60.08:0,60,808	0/0:33,0:32:67.43:0,67,1147	0/0:18,0:19:50.67:0,51,651	0/0:21,0:21:31.28:0,31,702	0/0:24,0:24:65.93:0,66,933	0/1:9,0:10:6.16:6,0,275
chr10	29509481	.	G	GCTGCTTTT	3610.25	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-1.905;DP=614;FS=3.357;HRun=0;HaplotypeScore=153.2678;InbreedingCoeff=0.9965;MQ=78.62;MQ0=0;MQRankSum=-9.267;QD=88.05;ReadPosRankSum=-0.950;VQSLOD=3.9826;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,102,2848	0/0:10,0:10:30.10:0,30,800	0/0:15,0:15:29.41:0,29,448	0/0:17,0:17:38.03:0,38,909	0/0:10,0:10:27.09:0,27,750	0/0:15,0:15:39.13:0,39,1029	0/0:37,0:37:99:0,108,3019	0/0:32,0:32:84.27:0,84,2191	0/0:26,0:26:72.25:0,72,2023	0/0:24,0:24:66.23:0,66,1840	0/0:13,0:13:33.11:0,33,934	0/0:25,0:25:75.26:0,75,2123	0/0:28,0:28:72.23:0,72,1974	0/0:21,0:21:60.21:0,60,1652	0/0:29,0:29:81.28:0,81,2268	0/0:22,0:22:63.22:0,63,1695	1/1:11,13:24:60.20:2244,60,0	1/1:6,6:17:33.11:1366,33,0	0/0:21,0:21:63.20:0,63,1482	0/0:18,0:18:51.18:0,51,1409	0/0:31,0:31:93.32:0,93,2597	0/0:15,0:15:42.14:0,42,1093	0/0:7,0:7:21.07:0,21,594	0/0:30,0:30:87.28:0,87,2369	0/0:23,0:23:69.24:0,69,1877	0/0:22,0:22:63.20:0,63,1724	0/0:25,0:25:69.22:0,69,1880	0/0:20,0:20:57.20:0,57,1528
chr10	29510729	.	C	CTA	1798.80	PASS	AB=1.000;AC=6;AF=0.107;AN=56;BaseQRankSum=7.587;DP=776;FS=13.261;HRun=0;HaplotypeScore=97.6128;InbreedingCoeff=0.6624;MQ=73.69;MQ0=0;MQRankSum=-1.742;QD=21.41;ReadPosRankSum=-0.949;VQSLOD=3.3321;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,126,1637	0/0:11,0:11:30.10:0,30,390	0/0:17,0:16:32.69:0,33,395	0/1:13,0:12:7.17:7,0,142	0/0:33,0:33:90.29:0,90,1169	0/0:22,0:22:54.16:0,54,688	0/0:29,0:29:72.21:0,72,907	0/0:23,0:23:45.14:0,45,585	0/0:41,0:41:99:0,105,1365	0/0:46,0:46:99:0,126,1617	0/0:16,0:16:39.13:0,39,507	0/0:25,0:25:66.21:0,66,858	0/0:26,0:26:66.21:0,66,858	0/0:36,0:36:87.25:0,87,1101	0/0:47,0:47:99:0,129,1647	0/0:29,0:29:72.22:0,72,922	1/1:7,23:30:63.22:1071,63,0	1/1:5,21:26:51.17:843,51,0	0/0:20,0:20:48.15:0,48,612	0/1:15,0:15:8.17:8,0,429	0/0:53,0:53:99:0,141,1802	0/0:28,0:28:78.25:0,78,1014	0/0:18,0:18:45.10:0,45,551	0/0:32,0:32:84.27:0,84,1093	0/0:26,0:26:69.22:0,69,896	0/0:35,0:35:99:0,99,1271	0/0:28,0:28:69.20:0,69,868	0/0:5,0:5:15.05:0,15,195
chr10	29511001	.	TA	T	1707.12	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=10.044;DP=500;FS=10.422;HRun=2;HaplotypeScore=53.2976;InbreedingCoeff=0.9815;MQ=92.83;MQ0=0;MQRankSum=-1.719;QD=30.48;ReadPosRankSum=3.976;VQSLOD=2.1257;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:93.30:0,93,1372	0/0:11,0:11:33.10:0,33,474	0/0:27,0:27:68.25:0,68,1021	0/0:20,0:20:56.71:0,57,718	0/0:16,0:16:45.15:0,45,674	0/0:11,0:11:33.11:0,33,494	0/0:24,0:24:69.23:0,69,1034	0/0:22,0:22:66.22:0,66,989	0/0:13,0:13:39.13:0,39,583	0/0:26,0:26:75.24:0,75,1085	0/0:16,0:16:45.15:0,45,674	0/0:11,0:11:33.11:0,33,494	0/0:17,0:17:51.17:0,51,764	0/0:20,0:20:57.19:0,57,850	0/0:21,0:21:63.20:0,63,925	0/0:11,0:11:33.10:0,33,472	1/1:0,34:34:87.28:1128,87,0	1/1:1,21:22:54.18:701,54,0	0/0:13,0:13:39.13:0,39,585	0/0:11,0:11:30.10:0,30,448	0/0:17,0:17:51.17:0,51,764	0/0:14,0:14:42.14:0,42,613	0/0:9,0:9:21.07:0,21,315	0/0:24,0:24:72.18:0,72,1032	0/0:18,0:18:54.18:0,54,808	0/0:19,0:19:57.16:0,57,780	0/0:18,0:18:54.18:0,54,809	0/0:4,0:4:12.04:0,12,180
chr10	29512124	.	CATA	C	187.01	PASS	AB=0.933;AC=6;AF=0.107;AN=56;BaseQRankSum=5.942;DP=423;FS=9.529;HRun=0;HaplotypeScore=66.4900;InbreedingCoeff=0.2288;MQ=47.28;MQ0=53;MQRankSum=-4.498;QD=3.07;ReadPosRankSum=-2.893;VQSLOD=-0.1475;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:19:28.56:0,29,463	0/0:4,0:4:6.02:0,6,118	0/0:55,0:10:24.45:0,24,422	0/0:37,0:3:3.59:0,4,10	0/0:7,0:6:15.05:0,15,342	0/0:15,0:14:19.38:0,19,433	0/0:22,4:24:45.79:0,46,1151	0/0:16,0:16:13.78:0,14,695	0/0:17,0:16:23.45:0,23,509	0/1:7,1:5:23.16:23,0,136	0/0:4,0:3:9.02:0,9,154	0/0:15,0:13:36.11:0,36,725	0/0:6,0:4:12.03:0,12,240	0/0:13,0:13:22.82:0,23,449	0/0:14,0:13:6.25:0,6,565	0/0:5,0:5:15.03:0,15,299	0/1:13,0:13:3.25:171,0,3	1/1:6,0:6:14.21:94,14,0	0/1:15,1:12:9.33:9,0,399	0/0:11,1:10:21.07:0,21,450	0/0:51,5:50:11.97:0,12,1580	0/0:2,0:2:3.01:0,3,48	0/0:7,1:8:21.54:0,22,431	0/1:16,2:17:11.42:11,0,671	0/0:6,0:6:9.50:0,10,196	0/0:7,0:7:14.05:0,14,270	0/0:10,0:9:27.09:0,27,507	0/0:5,0:4:6.02:0,6,137
chr10	29512127	.	A	ACAC	1485.50	PASS	AB=0.946;AC=37;AF=0.771;AN=48;BaseQRankSum=-3.359;DP=413;FS=0.000;HRun=0;HaplotypeScore=78.7615;InbreedingCoeff=0.1569;MQ=45.19;MQ0=54;MQRankSum=1.963;QD=5.40;ReadPosRankSum=1.052;VQSLOD=2.0022;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:18:0.47:1,0,0	1/1:3,1:4:3.01:58,3,0	./.	./.	./.	0/1:9,3:11:0:0,0,0	0/1:29,0:28:22.99:154,0,23	1/1:13,0:13:3.01:43,3,0	1/1:17,0:16:7.78:67,8,0	1/1:8,0:5:3.01:58,3,0	1/1:3,0:2:3.01:43,3,0	1/1:13,1:12:6.02:98,6,0	1/1:6,0:4:3.01:43,3,0	1/1:9,3:12:5.85:116,6,0	1/1:10,3:12:5.98:78,6,0	1/1:5,0:5:5.98:62,6,0	0/0:13,0:13:1.90:0,2,43	0/0:7,0:7:14.51:0,15,111	1/1:17,0:13:7.27:105,7,0	0/0:12,0:10:3.01:0,3,40	0/1:53,1:48:37.31:236,0,37	1/1:1,1:2:3.01:58,3,0	1/1:8,0:8:3.48:43,3,0	0/1:18,0:18:22.84:206,0,23	0/1:6,0:6:0:0,0,0	./.	1/1:9,2:10:6.02:116,6,0	1/1:3,0:2:2.99:24,3,0
chr10	29512156	.	AC	A	172.02	PASS	AB=0.825;AC=4;AF=0.071;AN=56;BaseQRankSum=4.153;DP=473;FS=2.664;HRun=2;HaplotypeScore=61.5495;InbreedingCoeff=0.2567;MQ=32.51;MQ0=81;MQRankSum=-3.460;QD=4.41;ReadPosRankSum=0.206;VQSLOD=0.5906;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:13,7:18:21.94:147,0,22	0/0:2,0:2:3:0,3,26	0/0:83,0:1:2.92:0,3,17	0/0:91,0:2:1.55:0,2,4	0/0:7,0:4:4.46:0,4,16	0/0:8,0:7:5.67:0,6,55	0/0:20,0:18:35.89:0,36,373	0/0:17,0:15:29.46:0,29,353	0/0:13,0:13:12.03:0,12,138	0/0:10,0:10:19.17:0,19,177	0/0:8,0:5:3.45:0,3,23	0/0:9,0:9:22.76:0,23,240	0/0:6,0:4:12:0,12,129	0/0:11,0:11:15.03:0,15,121	0/0:10,0:9:15.51:0,16,192	0/0:5,0:5:8.89:0,9,94	0/1:9,1:8:45.62:64,0,46	1/1:9,0:7:12.03:69,12,0	0/0:16,0:10:23.74:0,24,252	0/0:7,0:7:13.85:0,14,157	0/0:49,0:44:68.34:0,68,775	0/0:9,0:9:11.49:0,11,88	0/0:7,0:7:5.61:0,6,44	0/0:16,0:15:24.31:0,24,262	0/0:5,0:3:0.47:0,0,1	0/0:13,0:12:27.08:0,27,361	0/0:10,0:7:18.01:0,18,203	0/0:2,0:1:3.01:0,3,42
chr10	29512160	.	CCA	C	701.31	PASS	AB=0.944;AC=24;AF=0.429;AN=56;BaseQRankSum=2.747;DP=456;FS=11.104;HRun=0;HaplotypeScore=56.6566;InbreedingCoeff=-0.2260;MQ=31.56;MQ0=79;MQRankSum=1.340;QD=3.22;ReadPosRankSum=0.747;VQSLOD=0.4242;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:17:0.90:0,1,3	1/1:1,0:1:2.94:18,3,0	0/0:80,0:1:2.94:0,3,18	0/0:87,0:2:1.25:0,1,3	0/0:7,0:4:4.68:0,5,24	0/0:7,1:7:2.97:0,3,20	0/1:15,1:14:39.71:119,0,40	0/1:16,1:15:6.76:7,0,362	1/1:4,8:12:10.27:123,10,0	0/0:9,1:10:6:0,6,234	1/1:7,1:5:1.81:40,2,0	0/1:5,4:9:37.95:79,0,38	0/1:4,1:4:33.72:34,0,64	0/1:9,0:9:24.51:25,0,48	0/1:9,1:9:19.73:20,0,42	0/1:6,0:6:33.68:34,0,47	0/1:11,0:8:32.67:33,0,46	0/1:8,0:7:0.37:40,0,0	0/1:15,0:9:44.81:45,0,126	0/0:7,0:6:12.04:0,12,163	0/1:47,0:42:68.44:68,0,348	0/1:9,0:9:9.02:9,0,62	1/1:5,0:5:2.18:40,2,0	0/1:16,2:17:69.28:69,0,70	0/0:4,0:2:3.01:0,3,34	0/0:16,0:14:8.13:0,8,263	0/1:9,0:6:24.27:24,0,60	1/1:2,0:1:2.99:24,3,0
chr10	29512169	.	AC	A	133.91	PASS	AB=0.813;AC=3;AF=0.056;AN=54;BaseQRankSum=2.944;DP=449;FS=1.486;HRun=2;HaplotypeScore=65.2971;InbreedingCoeff=0.3204;MQ=30.98;MQ0=72;MQRankSum=-2.835;QD=6.38;ReadPosRankSum=0.945;VQSLOD=0.8224;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:12,7:18:1.77:0,2,5	0/0:1,0:1:3.01:0,3,40	0/0:70,0:1:2.88:0,3,15	0/0:81,0:2:2.51:0,3,8	0/0:7,0:4:4.68:0,5,24	0/0:11,0:9:8.85:0,9,81	0/0:18,0:15:8.71:0,9,88	0/0:16,0:14:35.97:0,36,434	0/0:9,0:10:8.25:0,8,40	0/0:11,0:11:26.30:0,26,322	0/0:9,0:6:7.20:0,7,37	0/0:11,0:11:23:0,23,215	0/0:6,0:5:11.90:0,12,121	0/0:9,0:9:11.43:0,11,139	0/0:8,0:7:15.52:0,16,183	0/0:7,0:7:14.17:0,14,129	0/1:10,3:9:43.39:101,0,43	1/1:4,4:6:11.87:130,12,0	0/0:14,0:8:14.86:0,15,209	0/0:7,0:5:12.04:0,12,155	0/0:47,0:37:52.94:0,53,617	0/0:11,0:10:9.03:0,9,116	0/0:4,0:4:1.72:0,2,4	0/0:17,0:16:24.25:0,24,253	0/0:10,0:7:6.43:0,6,56	0/0:15,0:13:29.68:0,30,305	0/0:9,0:6:13.86:0,14,164	./.
chr10	29512170	.	C	CA	122.42	PASS	AB=0.765;AC=3;AF=0.056;AN=54;BaseQRankSum=2.465;DP=448;FS=0.000;HRun=1;HaplotypeScore=66.8668;InbreedingCoeff=0.3034;MQ=31.04;MQ0=72;MQRankSum=-3.018;QD=5.83;ReadPosRankSum=0.495;VQSLOD=0.3575;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,1:16:1.77:0,2,5	0/0:1,0:1:3.01:0,3,40	0/0:70,0:1:2.88:0,3,15	0/0:81,0:2:2.51:0,3,8	0/0:7,0:4:4.68:0,5,24	0/0:10,0:8:8.85:0,9,97	0/0:17,0:14:6.90:0,7,83	0/0:16,0:14:35.97:0,36,434	0/0:10,0:10:8.73:0,9,54	0/0:12,0:12:26.92:0,27,333	0/0:9,0:6:7.20:0,7,37	0/0:11,0:11:23.99:0,24,264	0/0:6,0:5:11.90:0,12,132	0/0:9,0:9:11.43:0,11,139	0/0:8,0:7:15.52:0,16,199	0/0:7,0:7:14.17:0,14,138	0/1:9,4:9:47.78:101,0,48	1/1:8,0:6:8.79:116,9,0	0/0:14,0:8:14.86:0,15,209	0/0:7,0:5:12.04:0,12,155	0/0:48,0:38:55.59:0,56,647	0/0:11,0:10:9.03:0,9,116	0/0:4,0:4:1.72:0,2,4	0/0:17,0:16:23.98:0,24,267	0/0:10,0:7:6.43:0,6,62	0/0:13,0:13:30.17:0,30,319	0/0:10,0:7:13.86:0,14,165	./.
chr10	29512313	.	A	AG	354.18	PASS	AB=0.987;AC=13;AF=0.232;AN=56;BaseQRankSum=2.095;DP=447;FS=0.765;HRun=1;HaplotypeScore=70.8915;InbreedingCoeff=0.3811;MQ=64.32;MQ0=77;MQRankSum=-2.057;QD=3.98;ReadPosRankSum=-2.447;VQSLOD=-0.7502;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:12:0.97:0,1,17	0/0:2,0:2:6.01:0,6,66	0/0:80,0:13:11.79:0,12,263	0/0:90,0:27:19.03:0,19,334	0/0:8,0:8:17.12:0,17,85	1/1:11,0:10:2.60:10,3,0	0/1:13,0:13:11.63:12,0,96	0/0:26,0:25:16.30:0,16,178	0/0:12,0:11:3.01:0,3,40	0/0:12,0:12:20.70:0,21,105	0/0:7,0:7:6.84:0,7,19	0/1:12,0:12:26.59:27,0,69	0/0:10,0:10:20.98:0,21,64	0/0:11,0:11:24.89:0,25,168	0/0:9,0:9:15.01:0,15,77	0/0:11,0:10:4.10:0,4,60	1/1:3,6:7:18.53:251,19,0	1/1:3,4:6:11.97:152,12,0	0/0:6,0:5:13.04:0,13,111	0/0:11,0:10:17.88:0,18,75	0/0:11,0:10:7.86:0,8,34	1/1:12,0:11:7.37:39,7,0	0/1:4,0:4:0.13:0,0,0	0/0:18,0:18:3.83:0,4,35	0/1:6,0:6:0.20:0,0,10	0/0:15,0:14:23.65:0,24,133	0/1:14,0:14:10.78:11,0,151	0/0:5,0:4:6.11:0,6,19
chr10	29512319	.	GA	G	4568.86	PASS	AB=0.846;AC=43;AF=0.827;AN=52;BaseQRankSum=-5.281;DP=413;FS=2.371;HRun=2;HaplotypeScore=50.0744;InbreedingCoeff=0.1574;MQ=57.34;MQ0=77;MQRankSum=1.293;QD=14.37;ReadPosRankSum=4.432;VQSLOD=4.4881;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:11,6:15:10.10:113,0,10	./.	0/0:58,1:4:5.87:0,6,59	0/1:66,3:17:13.40:13,0,123	1/1:1,6:7:19.87:233,20,0	1/1:1,0:12:2.90:16,3,0	1/1:4,10:13:19.86:262,20,0	1/1:6,21:25:62.02:756,62,0	./.	1/1:2,9:10:2.27:281,2,0	1/1:1,5:6:7.48:82,7,0	1/1:1,0:12:5.50:42,6,0	1/1:0,10:10:30.10:382,30,0	1/1:1,8:9:24.08:306,24,0	1/1:0,8:8:18.06:232,18,0	1/1:7,3:9:20.52:217,21,0	0/1:11,0:9:51:58,0,51	0/1:6,0:5:5.26:11,0,5	1/1:6,1:4:9.02:104,9,0	1/1:5,5:9:22.31:235,22,0	1/1:5,8:12:17.65:276,18,0	1/1:2,1:13:11.06:106,11,0	1/1:2,0:5:1.11:3,1,0	0/0:4,0:19:1.36:0,1,11	1/1:2,3:6:11.90:130,12,0	0/1:2,0:15:14.78:315,0,15	1/1:1,9:10:23.80:278,24,0	1/1:3,3:4:9.03:116,9,0
chr10	29512414	.	GAA	G	1252.21	PASS	AB=0.576;AC=3;AF=0.054;AN=56;BaseQRankSum=8.758;DP=615;FS=0.662;HRun=3;HaplotypeScore=85.3075;InbreedingCoeff=0.6891;MQ=53.17;MQ0=8;MQRankSum=0.430;QD=32.11;ReadPosRankSum=2.209;VQSLOD=3.3992;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:90.10:0,90,1583	0/0:8,0:8:24.08:0,24,460	0/0:30,0:12:33.07:0,33,524	0/0:49,1:19:10.81:0,11,499	0/0:13,0:12:36.01:0,36,582	0/0:23,0:22:54.02:0,54,878	0/0:19,0:19:50.12:0,50,834	0/0:37,0:37:99:0,105,1899	0/0:21,0:21:57.09:0,57,989	0/0:18,0:18:48.16:0,48,917	0/0:15,0:15:44.98:0,45,824	0/0:22,0:22:51.13:0,51,946	0/0:20,0:20:60.14:0,60,1084	0/0:21,0:21:59.98:0,60,968	0/0:15,0:15:44.97:0,45,682	0/0:17,0:17:48.03:0,48,771	0/1:5,14:19:7.91:504,0,8	1/1:2,18:20:57.19:854,57,0	0/0:26,0:22:57.10:0,57,976	0/0:21,0:21:63.17:0,63,1171	0/0:21,0:21:63.17:0,63,1170	0/0:20,0:20:50.83:0,51,664	0/0:19,0:19:51.03:0,51,833	0/0:14,0:14:27.09:0,27,521	0/0:19,0:19:57.07:0,57,979	0/0:34,0:33:99:0,99,1900	0/0:28,0:27:78.03:0,78,1276	0/0:12,0:12:36.12:0,36,684
chr10	29515337	.	ATATATATACATATATATATATG	A	1667.70	PASS	AB=1.000;AC=5;AF=0.104;AN=48;BaseQRankSum=4.111;DP=156;FS=4.105;HRun=0;HaplotypeScore=106.0205;InbreedingCoeff=0.4214;MQ=68.17;MQ0=0;MQRankSum=-5.408;QD=55.59;ReadPosRankSum=3.426;VQSLOD=2.8173;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:7:12.03:0,12,541	0/0:5,0:5:15.05:0,15,945	0/0:5,0:3:1.25:0,1,3	0/1:13,0:7:24.99:25,0,213	0/0:4,0:4:12.04:0,12,674	0/0:5,0:5:15.05:0,15,736	./.	0/0:32,0:32:93.30:0,93,4287	0/0:7,0:7:12.04:0,12,320	0/0:3,0:3:9.03:0,9,543	0/0:4,0:4:9.03:0,9,475	0/0:2,0:2:6.02:0,6,373	0/0:2,0:2:6.02:0,6,365	./.	0/0:3,0:3:9.03:0,9,816	0/0:3,0:3:9.03:0,9,365	1/1:5,8:13:33.07:1570,33,0	1/1:0,3:3:3.01:185,3,0	0/0:10,0:10:27.08:0,27,1433	0/0:3,0:3:6.49:0,6,286	0/0:2,0:2:6.02:0,6,510	0/0:1,0:1:3.01:0,3,131	./.	./.	0/0:4,0:4:12.04:0,12,600	0/0:6,0:6:18.06:0,18,1121	0/0:4,0:4:12.04:0,12,571	0/0:14,0:14:24.05:0,24,1375
chr10	29515422	.	AGTGT	A	427.09	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=1.611;DP=334;FS=13.819;HRun=0;HaplotypeScore=68.0496;InbreedingCoeff=0.9387;MQ=85.63;MQ0=0;MQRankSum=-3.459;QD=38.83;ReadPosRankSum=0.792;VQSLOD=2.3853;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:30.10:0,30,839	0/0:6,0:6:18.06:0,18,504	0/0:12,0:12:29.89:0,30,682	0/0:9,0:9:26.45:0,26,628	0/0:18,0:18:54.19:0,54,1511	0/0:14,0:13:42.14:0,42,1175	0/0:9,0:9:27.09:0,27,713	0/0:15,0:15:45.15:0,45,1249	0/0:13,0:13:39.13:0,39,1091	0/0:14,0:14:39.13:0,39,1092	0/0:14,0:14:42.14:0,42,1175	0/0:11,0:11:33.11:0,33,923	0/0:4,0:4:12.04:0,12,321	0/0:10,0:10:30.10:0,30,839	0/0:12,0:12:36.12:0,36,1007	0/0:6,0:6:18.06:0,18,504	1/1:1,7:8:18.06:359,18,0	1/1:0,3:3:9.03:180,9,0	0/0:11,0:11:33.09:0,33,736	0/0:23,0:23:69.24:0,69,1931	0/0:11,0:11:33.11:0,33,914	0/0:11,0:11:33.11:0,33,923	0/0:15,0:15:42.14:0,42,1143	0/0:13,0:13:39.13:0,39,1091	0/0:15,0:15:45.15:0,45,1249	0/0:16,0:16:45.15:0,45,1215	0/0:15,0:14:45.15:0,45,1259	0/0:16,0:16:48.16:0,48,1342
chr10	29516165	.	A	AACCC	301.65	PASS	AB=0.839;AC=24;AF=0.923;AN=26;BaseQRankSum=-3.183;DP=37;FS=0.000;HRun=0;HaplotypeScore=30.8984;InbreedingCoeff=-0.0226;MQ=174.62;MQ0=0;MQRankSum=-1.850;QD=8.38;ReadPosRankSum=-1.801;VQSLOD=1.5207;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,0:2:5.75:30,6,0	./.	0/1:9,1:9:62.91:63,0,87	0/1:7,3:10:26.27:133,0,26	./.	1/1:1,0:1:0.47:1,0,0	1/1:1,0:1:2.94:18,3,0	./.	./.	./.	1/1:1,0:1:2.90:16,3,0	1/1:3,0:3:3.48:34,3,0	./.	1/1:1,0:1:2.88:15,3,0	1/1:1,0:1:0.47:1,0,0	1/1:1,0:1:3.01:35,3,0	./.	./.	./.	./.	1/1:3,0:3:3.25:33,3,0	./.	./.	./.	1/1:1,0:1:0.47:1,0,0	1/1:1,0:1:2.04:6,2,0	./.	./.
chr10	29517082	.	CTGTT	C	1156.31	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.494;DP=688;FS=5.423;HRun=0;HaplotypeScore=114.3623;InbreedingCoeff=0.9969;MQ=85.89;MQ0=0;MQRankSum=-7.550;QD=35.04;ReadPosRankSum=2.082;VQSLOD=3.7231;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,148,4026	0/0:9,0:9:27.09:0,27,734	0/0:27,0:27:72.16:0,72,1911	0/0:24,0:23:66.20:0,66,1597	0/0:19,0:19:50.77:0,51,1145	0/0:24,0:24:63.17:0,63,1663	0/0:23,0:23:69.24:0,69,1889	0/0:28,0:28:75.25:0,75,1971	0/0:24,0:24:66.18:0,66,1736	0/0:31,0:31:90.31:0,90,2464	0/0:13,0:13:39.13:0,39,997	0/0:23,0:23:69.20:0,69,1803	0/0:30,0:30:87.28:0,87,2294	0/0:26,0:26:78.23:0,78,2076	0/0:27,0:27:81.22:0,81,2092	0/0:17,0:17:48.16:0,48,1260	1/1:0,17:17:30.07:581,30,0	1/1:1,15:16:36.12:697,36,0	0/0:33,0:33:93.32:0,93,2460	0/0:20,0:20:57.18:0,57,1482	0/0:65,0:65:99:0,187,4918	0/0:22,0:22:60.20:0,60,1458	0/0:11,0:11:33.11:0,33,903	0/0:31,0:31:93.32:0,93,2548	0/0:19,0:19:57.16:0,57,1413	0/0:29,0:29:84.22:0,84,2237	0/0:23,0:23:69.24:0,69,1855	0/0:7,0:7:21.07:0,21,575
chr10	29517254	.	CT	C	1396.90	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=10.309;DP=684;FS=0.000;HRun=2;HaplotypeScore=81.8833;InbreedingCoeff=0.9994;MQ=83.49;MQ0=0;MQRankSum=-2.034;QD=33.26;ReadPosRankSum=2.056;VQSLOD=3.8327;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,150,2207	0/0:9,0:9:27.09:0,27,398	0/0:19,0:19:52:0,52,761	0/0:25,0:25:55.11:0,55,719	0/0:37,0:37:99:0,105,1552	0/0:21,0:21:63.20:0,63,923	0/0:30,0:30:90.30:0,90,1349	0/0:19,0:19:54.18:0,54,810	0/0:19,0:19:54.18:0,54,808	0/0:33,0:33:96.32:0,96,1413	0/0:17,0:17:48.16:0,48,718	0/0:19,0:19:54.18:0,54,807	0/0:15,0:15:45.15:0,45,673	0/0:24,0:24:69.22:0,69,1014	0/0:14,0:14:42.13:0,42,599	0/0:16,0:16:48.15:0,48,694	1/1:0,22:22:63.20:818,63,0	1/1:0,20:20:54.18:701,54,0	0/0:31,0:31:93.31:0,93,1375	0/0:21,0:21:60.19:0,60,881	0/0:40,0:40:99:0,120,1797	0/0:25,0:25:72.23:0,72,1059	0/0:27,1:28:81.26:0,81,1190	0/0:36,0:36:99:0,105,1568	0/0:19,0:19:54.18:0,54,809	0/0:29,0:29:87.28:0,87,1279	0/0:28,0:28:84.28:0,84,1258	0/0:18,0:18:48.16:0,48,718
chr10	29517400	.	CA	C	1578.60	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.515;DP=583;FS=2.768;HRun=3;HaplotypeScore=64.9020;InbreedingCoeff=0.9824;MQ=85.59;MQ0=0;MQRankSum=-5.549;QD=31.57;ReadPosRankSum=1.998;VQSLOD=3.9021;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,50:50:99:1673,135,0	0/0:8,0:8:24.08:0,24,344	0/0:25,0:25:75.18:0,75,999	0/0:19,0:19:56.97:0,57,724	0/0:23,0:23:69.20:0,69,957	0/0:19,0:19:54.18:0,54,777	0/0:17,0:17:45.15:0,45,648	0/0:23,0:23:66.19:0,66,899	0/0:18,0:18:51.15:0,51,714	0/0:23,0:23:69.20:0,69,971	0/0:16,0:16:48.16:0,48,688	0/0:17,0:17:51.16:0,51,718	0/0:15,0:15:45.15:0,45,648	0/0:18,0:18:54.18:0,54,778	0/0:23,0:23:69.21:0,69,954	0/0:20,0:20:60.20:0,60,863	0/0:30,0:30:87.29:0,87,1192	0/0:20,0:20:56.86:0,57,751	0/0:20,0:20:54.18:0,54,775	0/0:13,0:13:39.13:0,39,561	0/0:19,0:19:54.17:0,54,758	0/0:19,0:19:54.13:0,54,738	0/0:26,0:26:75.24:0,75,1062	0/0:18,0:18:42.09:0,42,587	0/0:20,0:20:57.17:0,57,801	0/0:29,0:29:87.28:0,87,1237	0/0:30,0:30:90.29:0,90,1276	0/0:5,0:5:15.05:0,15,216
chr10	29517958	.	G	GCTAA	572.57	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=3.874;DP=661;FS=0.000;HRun=0;HaplotypeScore=173.7833;InbreedingCoeff=0.9802;MQ=79.26;MQ0=0;MQRankSum=-5.395;QD=44.04;ReadPosRankSum=0.940;VQSLOD=3.9386;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:90.31:0,90,1699	0/0:12,0:12:29.95:0,30,570	0/0:19,0:19:45.12:0,45,780	0/0:14,0:14:27.56:0,28,492	0/0:24,0:24:72.25:0,72,1361	0/0:36,0:36:96.32:0,96,1782	0/0:23,0:23:66.23:0,66,1253	0/0:41,0:41:99:0,117,2127	0/0:23,0:23:66.23:0,66,1246	0/0:32,0:32:90.30:0,90,1651	0/0:22,0:22:60.21:0,60,1139	0/0:21,0:21:63.22:0,63,1184	0/0:17,0:17:48.14:0,48,876	0/0:25,0:25:66.21:0,66,1204	0/0:25,0:25:69.22:0,69,1278	0/0:27,0:27:78.27:0,78,1474	1/1:2,4:6:12.43:202,12,0	1/1:3,4:7:18.06:485,18,0	0/0:24,0:24:66.20:0,66,1219	0/0:29,0:29:84.29:0,84,1595	0/0:36,0:35:87.30:0,87,1636	0/0:17,0:17:51.17:0,51,968	0/0:23,0:23:66.21:0,66,1220	0/0:28,0:28:78.27:0,78,1470	0/0:25,0:25:66.23:0,66,1240	0/0:29,0:29:78.27:0,78,1477	0/0:30,0:29:75.26:0,75,1416	0/0:16,0:16:48.12:0,48,832
chr10	29518052	.	ATCT	A	78.22	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=3.386;DP=593;FS=0.000;HRun=0;HaplotypeScore=127.8151;InbreedingCoeff=0.8441;MQ=76.18;MQ0=1;MQRankSum=-1.852;QD=9.78;ReadPosRankSum=-2.639;VQSLOD=2.4812;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:63.15:0,63,1242	0/0:16,0:16:39.13:0,39,821	0/0:29,0:26:43.28:0,43,940	0/0:23,0:16:10.43:0,10,294	0/0:24,0:24:62.80:0,63,1225	0/0:25,0:25:64.77:0,65,1331	0/0:23,0:23:51.09:0,51,952	0/0:47,0:47:99:0,111,2207	0/0:15,0:15:39.12:0,39,783	0/0:27,0:27:63.20:0,63,1284	0/0:20,0:20:48.15:0,48,972	0/0:14,0:14:30.10:0,30,632	0/0:17,0:17:33.11:0,33,687	0/0:21,0:21:57.20:0,57,1201	0/0:20,0:20:48.16:0,48,995	0/0:24,0:24:60.21:0,60,1264	1/1:2,3:5:9.03:133,9,0	1/1:2,1:3:3.01:45,3,0	0/0:22,0:22:54.18:0,54,1089	0/0:18,0:18:51.18:0,51,1074	0/0:26,0:26:58.87:0,59,1222	0/0:14,0:14:33.11:0,33,695	0/0:18,0:18:42.14:0,42,878	0/0:14,0:13:30.10:0,30,632	0/0:25,0:25:63.22:0,63,1312	0/0:32,0:32:75.26:0,75,1580	0/0:24,0:24:63.69:0,64,1283	0/0:22,0:22:63.19:0,63,1246
chr10	29518070	.	T	TC	16242.68	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-7.856;DP=621;FS=14.535;HRun=6;HaplotypeScore=64.3372;InbreedingCoeff=0.8962;MQ=68.82;MQ0=5;MQRankSum=-0.605;QD=29.97;ReadPosRankSum=4.803;VQSLOD=4.0364;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,18:24:50.62:638,51,0	1/1:0,16:16:42.13:526,42,0	0/0:47,0:26:49.74:0,50,506	0/0:32,0:15:18.04:0,18,230	1/1:3,28:30:73.94:939,74,0	1/1:5,22:27:78.19:949,78,0	1/1:2,16:19:39.76:524,40,0	1/1:10,28:37:84.09:934,84,0	1/1:0,14:14:36.11:451,36,0	1/1:6,20:26:60.17:728,60,0	1/1:2,19:21:54.05:640,54,0	1/1:1,12:13:27.09:339,27,0	1/1:3,11:15:36.10:430,36,0	1/1:2,23:25:57.18:716,57,0	1/1:0,20:20:54.13:661,54,0	1/1:3,24:26:66.21:830,66,0	1/1:4,0:4:6.01:62,6,0	1/1:2,0:2:6.01:57,6,0	1/1:2,21:23:66.19:805,66,0	1/1:1,22:23:63.20:788,63,0	1/1:3,21:24:54.48:710,54,0	1/1:1,13:14:36.03:431,36,0	1/1:3,14:17:44.97:519,45,0	1/1:1,16:16:33.11:415,33,0	1/1:3,23:26:69.22:866,69,0	1/1:1,24:25:72.23:902,72,0	1/1:4,21:25:36.52:589,37,0	1/1:2,24:26:63.20:792,63,0
chr10	29518074	.	C	CG	4241.59	PASS	AB=1.000;AC=46;AF=0.821;AN=56;BaseQRankSum=-0.235;DP=620;FS=2.730;HRun=0;HaplotypeScore=107.2650;InbreedingCoeff=0.2426;MQ=66.44;MQ0=8;MQRankSum=-1.374;QD=7.81;ReadPosRankSum=12.283;VQSLOD=2.9878;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:23:17.71:171,0,18	1/1:16,0:16:34.49:143,34,0	0/0:46,0:24:55.25:0,55,767	0/0:31,0:14:32.70:0,33,381	1/1:32,0:31:18.99:266,19,0	1/1:28,0:28:22.38:234,22,0	0/1:19,0:19:2.59:114,0,3	0/1:35,0:34:67.14:125,0,67	1/1:14,0:14:32.26:131,32,0	0/1:28,0:28:92.35:114,0,92	1/1:22,0:22:25.92:159,26,0	1/1:13,0:13:2.30:72,2,0	1/1:15,0:15:7.22:100,7,0	1/1:24,0:24:27.25:182,27,0	1/1:22,0:21:40.59:177,41,0	1/1:27,0:25:41.22:220,41,0	1/1:3,3:5:11.67:118,12,0	1/1:0,2:2:6.02:90,6,0	1/1:24,0:23:10.16:201,10,0	1/1:24,0:24:18.90:208,19,0	1/1:21,0:21:51.81:227,52,0	1/1:14,0:14:4.73:104,5,0	0/1:18,0:18:34.33:104,0,34	1/1:17,0:16:30.34:139,30,0	1/1:24,0:24:38.91:226,39,0	1/1:26,0:26:15.94:194,16,0	1/1:22,0:22:30.73:205,31,0	0/1:27,0:27:1.79:219,0,2
chr10	29518898	.	TATAAC	T	1540.20	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.632;DP=583;FS=1.609;HRun=0;HaplotypeScore=103.7255;InbreedingCoeff=0.9995;MQ=68.89;MQ0=0;MQRankSum=-2.754;QD=46.67;ReadPosRankSum=2.853;VQSLOD=3.7529;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:42.14:0,42,1316	0/0:11,0:11:30.10:0,30,908	0/0:18,0:18:45.15:0,45,1297	0/0:15,0:15:37.01:0,37,1083	0/0:27,0:27:72.25:0,72,2211	0/0:19,0:19:57.17:0,57,1627	0/0:14,0:14:42.14:0,42,1235	0/0:34,0:33:90.29:0,90,2624	0/0:17,0:17:48.15:0,48,1403	0/0:27,0:27:81.27:0,81,2470	0/0:23,0:23:69.22:0,69,2091	0/0:17,0:17:48.16:0,48,1504	0/0:22,0:22:66.21:0,66,1968	0/0:13,0:13:36.12:0,36,1040	0/0:20,0:20:60.21:0,60,1880	0/0:17,0:17:51.18:0,51,1597	1/1:0,14:14:39.13:830,39,0	1/1:3,16:19:39.13:831,39,0	0/0:20,0:20:60.19:0,60,1745	0/0:27,0:27:81.28:0,81,2492	0/0:17,0:17:51.18:0,51,1593	0/0:19,0:19:54.19:0,54,1692	0/0:32,0:32:87.30:0,87,2718	0/0:22,0:22:66.22:0,66,1954	0/0:21,0:21:63.22:0,63,1900	0/0:27,0:27:75.25:0,75,2283	0/0:19,0:19:51.17:0,51,1499	0/0:36,0:36:99:0,108,3155
chr10	29519853	.	C	CTGAAT	1736.27	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-0.014;DP=738;FS=0.000;HRun=0;HaplotypeScore=138.6424;InbreedingCoeff=0.9978;MQ=88.98;MQ0=1;MQRankSum=-5.448;QD=56.01;ReadPosRankSum=0.949;VQSLOD=4.2320;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,123,2569	0/0:20,0:20:57.20:0,57,1195	0/0:32,0:32:69.01:0,69,1426	0/0:25,0:25:63.19:0,63,1260	0/0:28,0:28:81.28:0,81,1727	0/0:19,0:19:54.17:0,54,1108	0/0:31,0:30:57.86:0,58,1745	0/0:40,0:40:99:0,114,2291	0/0:27,0:27:81.28:0,81,1711	0/0:38,0:38:99:0,108,2245	0/0:21,0:21:54.17:0,54,1111	0/0:29,0:29:87.30:0,87,1836	0/0:30,0:30:84.29:0,84,1789	0/0:21,0:21:63.22:0,63,1342	0/0:27,0:27:81.28:0,81,1685	0/0:27,0:27:75.26:0,75,1571	1/1:4,18:23:42.14:1257,42,0	1/1:0,8:8:21.07:600,21,0	0/0:27,0:27:75.26:0,75,1595	0/0:30,0:30:84.26:0,84,1708	0/0:30,0:29:81.28:0,81,1723	0/0:24,0:24:66.18:0,66,1289	0/0:23,0:23:66.21:0,66,1368	0/0:35,0:35:99:0,102,2174	0/0:16,0:16:45.14:0,45,921	0/0:23,0:23:66.23:0,66,1406	0/0:29,0:29:81.28:0,81,1674	0/0:13,0:13:36.12:0,36,751
chr10	29520112	.	T	TATA	5666.27	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-3.283;DP=717;FS=0.000;HRun=0;HaplotypeScore=104.4700;InbreedingCoeff=0.9995;MQ=97.07;MQ0=0;MQRankSum=-9.029;QD=55.01;ReadPosRankSum=2.878;VQSLOD=6.9931;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,33:39:78.27:1796,78,0	0/0:11,0:11:30.10:0,30,504	0/0:34,0:34:96.26:0,96,1511	0/0:37,0:37:90.15:0,90,1426	0/0:29,0:29:84.27:0,84,1402	0/0:23,0:23:66.23:0,66,1126	0/0:28,0:28:84.29:0,84,1429	0/0:43,0:43:99:0,120,1969	1/1:1,27:28:81.28:1867,81,0	0/0:30,0:30:87.30:0,87,1477	0/0:17,0:17:51.16:0,51,829	0/0:31,0:31:90.29:0,90,1500	0/0:24,0:24:65.87:0,66,1121	0/0:16,0:16:42.13:0,42,690	0/0:25,0:25:66.23:0,66,1117	0/0:18,0:18:51.17:0,51,870	1/1:5,21:26:60.21:1381,60,0	1/1:1,9:10:27.09:623,27,0	0/0:20,0:20:53.95:0,54,891	0/0:28,0:28:81.26:0,81,1355	0/0:26,0:26:75.24:0,75,1249	0/0:29,0:29:87.30:0,87,1474	0/0:21,0:21:60.20:0,60,1004	0/0:26,0:26:75.24:0,75,1243	0/0:20,0:20:57.19:0,57,972	0/0:26,0:26:75.26:0,75,1266	0/0:39,0:39:99:0,117,1951	0/0:13,0:13:39.13:0,39,665
chr10	29520730	.	GCCTT	G	19255.63	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=11.865;DP=579;FS=11.928;HRun=0;HaplotypeScore=108.0597;InbreedingCoeff=0.9676;MQ=96.46;MQ0=2;MQRankSum=-12.928;QD=45.63;ReadPosRankSum=4.986;VQSLOD=4.8144;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,42:43:99:1936,102,0	1/1:1,3:4:6.02:114,6,0	0/0:34,0:34:90.31:0,90,2197	0/0:28,0:28:81.28:0,81,1894	1/1:0,14:14:30.10:569,30,0	1/1:1,14:15:36.12:680,36,0	1/1:0,26:26:69.24:1309,69,0	1/1:0,22:22:63.16:1100,63,0	0/0:23,0:23:60.15:0,60,1502	1/1:3,16:19:54.19:1022,54,0	1/1:0,11:11:24.08:455,24,0	1/1:1,21:22:48.16:891,48,0	1/1:1,10:10:27.09:492,27,0	1/1:0,26:26:66.23:1252,66,0	1/1:0,13:13:36.12:682,36,0	1/1:0,10:10:30.10:569,30,0	0/0:49,0:49:99:0,147,3807	0/0:23,0:23:69.24:0,69,1815	1/1:2,6:8:18.06:323,18,0	1/1:1,15:16:30.10:549,30,0	1/1:2,34:36:87.28:1651,87,0	1/1:0,7:7:18.06:341,18,0	1/1:1,12:13:36.12:683,36,0	1/1:2,43:44:87.20:1651,87,0	1/1:1,7:8:15.05:285,15,0	1/1:0,19:19:57.20:1052,57,0	1/1:1,21:22:57.20:1081,57,0	1/1:0,12:12:30.10:569,30,0
chr10	29521201	.	G	GA	17969.62	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-3.778;DP=615;FS=3.739;HRun=4;HaplotypeScore=79.8197;InbreedingCoeff=0.9975;MQ=79.33;MQ0=1;MQRankSum=-6.485;QD=35.17;ReadPosRankSum=4.345;VQSLOD=5.2941;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,51:54:99:1967,144,0	1/1:0,9:9:21.07:287,21,0	0/0:20,0:20:54.14:0,54,597	0/0:15,0:15:39.06:0,39,419	1/1:0,20:20:54.18:738,54,0	1/1:1,24:25:69.23:944,69,0	1/1:1,20:21:60.20:821,60,0	1/1:3,27:30:81.25:1089,81,0	0/0:20,0:20:48.14:0,48,544	1/1:4,30:34:90.30:1231,90,0	1/1:4,16:19:45.15:615,45,0	1/1:0,22:22:57.19:780,57,0	1/1:2,20:22:54.18:732,54,0	1/1:2,20:21:50.94:697,51,0	1/1:0,14:14:36.12:493,36,0	1/1:1,15:16:42.14:575,42,0	0/0:20,0:20:60.16:0,60,670	0/0:29,0:29:81.23:0,81,919	1/1:0,24:24:72.24:984,72,0	1/1:0,18:18:51.17:697,51,0	1/1:2,25:27:66.22:903,66,0	1/1:2,12:14:33.11:444,33,0	1/1:2,13:15:24.08:327,24,0	1/1:1,20:21:54.18:739,54,0	1/1:2,11:13:21.07:287,21,0	1/1:1,27:28:78.26:1062,78,0	1/1:3,27:30:78.26:1067,78,0	1/1:0,12:12:36.12:492,36,0
chr10	29521484	.	GCCT	G	4252.49	PASS	AB=0.887;AC=22;AF=0.393;AN=56;BaseQRankSum=11.433;DP=738;FS=172.929;HRun=0;HaplotypeScore=146.1601;InbreedingCoeff=-0.4809;MQ=43.77;MQ0=55;MQRankSum=-10.021;QD=7.24;ReadPosRankSum=1.215;VQSLOD=-0.1499;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:38,1:31:99:139,0,254	0/1:8,4:12:31.62:123,0,32	0/0:29,0:15:33.69:0,34,552	0/0:29,0:10:29.82:0,30,497	0/0:17,1:17:15.03:0,15,261	1/1:8,3:9:14.72:182,15,0	0/1:57,2:49:99:287,0,1321	0/1:10,5:14:82.22:245,0,82	0/0:19,0:18:42.14:0,42,942	0/1:29,8:36:99:360,0,700	0/1:17,2:14:1.63:2,0,109	0/1:36,5:37:99:170,0,691	0/1:22,3:22:99:301,0,427	0/1:32,5:28:99:284,0,519	0/1:24,4:27:99:351,0,188	0/1:15,2:16:99:208,0,314	0/0:16,0:15:45.14:0,45,990	0/0:22,0:21:60.68:0,61,1303	0/1:19,7:25:79.23:501,0,79	0/0:18,0:17:14.61:0,15,298	0/1:54,1:41:58.23:58,0,452	0/1:13,5:18:59.45:80,0,59	0/1:11,3:14:13.03:13,0,173	0/1:30,4:29:99:138,0,305	0/1:23,3:23:99:181,0,306	0/1:28,1:28:99:271,0,341	0/1:27,0:27:99:214,0,617	0/1:16,0:15:99:145,0,299
chr10	29521487	.	TCCC	T	6151.09	PASS	AB=0.779;AC=25;AF=0.446;AN=56;BaseQRankSum=9.104;DP=749;FS=232.473;HRun=4;HaplotypeScore=138.9455;InbreedingCoeff=-0.5178;MQ=42.14;MQ0=65;MQRankSum=-8.993;QD=9.60;ReadPosRankSum=-2.134;VQSLOD=-0.0286;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:30,11:32:99:201,0,349	1/1:10,2:12:12.47:131,12,0	0/1:25,0:11:3.87:4,0,417	0/0:29,0:10:21:0,21,386	0/0:10,8:17:14.08:0,14,269	1/1:7,5:9:6.02:159,6,0	0/1:42,21:50:99:472,0,1378	0/1:12,4:15:99:391,0,136	0/0:21,0:20:51.12:0,51,1021	0/1:30,7:35:99:531,0,691	0/1:11,6:12:25.15:25,0,65	0/1:34,9:38:99:268,0,752	0/1:16,7:20:99:437,0,440	0/1:28,10:28:99:353,0,562	0/1:19,8:25:99:411,0,195	0/1:15,4:17:99:325,0,367	0/0:16,0:15:45.12:0,45,988	0/0:22,0:21:60.68:0,61,1370	0/1:19,10:27:99:601,0,141	0/1:9,7:15:9.13:9,0,268	0/1:47,11:43:99:134,0,502	0/1:15,5:20:41.47:41,0,119	0/1:12,2:14:42.96:43,0,143	0/1:26,9:28:99:227,0,320	0/1:17,9:23:99:250,0,277	0/1:11,16:26:99:554,0,221	0/1:15,12:26:99:320,0,604	0/1:8,7:14:99:263,0,241
chr10	29522324	.	TG	T	2885.06	PASS	AB=1.000;AC=45;AF=0.804;AN=56;BaseQRankSum=10.293;DP=479;FS=109.742;HRun=1;HaplotypeScore=122.0932;InbreedingCoeff=0.7619;MQ=96.05;MQ0=0;MQRankSum=-1.198;QD=8.69;ReadPosRankSum=4.792;VQSLOD=0.2838;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:31,0:31:47.91:269,48,0	1/1:8,0:8:4.60:46,5,0	0/0:30,0:30:66.71:0,67,1085	0/0:30,0:29:77.32:0,77,1120	1/1:14,0:14:22.58:104,23,0	1/1:10,0:10:16.14:95,16,0	1/1:18,0:18:32.92:171,33,0	1/1:16,0:16:23.82:118,24,0	0/0:17,0:17:51.16:0,51,791	1/1:20,0:20:45.13:261,45,0	1/1:10,0:10:10.19:71,10,0	1/1:13,1:14:9.12:112,9,0	1/1:11,0:11:23.04:108,23,0	1/1:11,1:12:13.39:107,13,0	1/1:15,2:17:40.42:257,40,0	1/1:14,0:14:24.38:145,24,0	0/0:36,0:36:99:0,108,1673	0/0:34,0:34:99:0,102,1573	1/1:11,0:11:25.76:125,26,0	1/1:13,0:13:1.42:43,1,0	1/1:24,2:26:49.61:273,50,0	1/1:10,0:10:14.14:70,14,0	1/1:10,0:10:19.45:93,19,0	1/1:19,1:20:35.49:255,35,0	1/1:14,0:14:17.64:100,18,0	1/1:15,0:15:29.40:191,29,0	0/1:9,0:9:25.17:33,0,25	1/1:9,0:9:4.50:21,4,0
chr10	29522398	.	A	ACCT	14172.91	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=9.469;DP=397;FS=16.858;HRun=0;HaplotypeScore=89.1694;InbreedingCoeff=0.9887;MQ=86.99;MQ0=0;MQRankSum=-9.851;QD=49.90;ReadPosRankSum=4.393;VQSLOD=6.1216;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,7:12:27.24:369,27,0	1/1:0,9:9:24.08:527,24,0	0/0:15,0:16:39.48:0,39,614	0/0:28,0:27:64.92:0,65,941	1/1:1,13:14:35.85:671,36,0	1/1:1,11:12:30:608,30,0	1/1:0,14:15:33.01:668,33,0	1/1:2,16:19:51.16:1085,51,0	0/0:17,0:17:51.17:0,51,898	1/1:3,23:26:66.20:1412,66,0	1/1:0,9:9:15.05:303,15,0	1/1:3,8:11:27.09:585,27,0	1/1:2,6:8:18.02:334,18,0	1/1:1,12:13:36.12:786,36,0	1/1:1,8:9:18.06:389,18,0	1/1:0,8:9:21.07:455,21,0	0/0:23,0:23:69.24:0,69,1213	0/0:29,0:29:84.25:0,84,1424	1/1:2,9:12:36.05:628,36,0	1/1:0,14:15:29.02:648,29,0	1/1:1,9:10:30.09:613,30,0	1/1:0,13:13:36.12:751,36,0	1/1:1,10:11:26.98:539,27,0	1/1:1,10:11:23.82:465,24,0	1/1:0,12:13:29.89:558,30,0	1/1:0,11:11:30.09:619,30,0	1/1:0,10:10:27.09:590,27,0	1/1:2,10:12:27.09:571,27,0
chr10	29522687	.	C	CTG	14275.73	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=11.610;DP=436;FS=16.312;HRun=0;HaplotypeScore=123.5972;InbreedingCoeff=0.8911;MQ=85.46;MQ0=0;MQRankSum=-10.277;QD=43.13;ReadPosRankSum=2.018;VQSLOD=5.1343;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,25:28:54.19:988,54,0	1/1:1,1:2:3.01:55,3,0	0/0:23,0:23:63.21:0,63,891	0/0:16,0:16:7.23:0,7,441	1/1:2,11:13:24.08:439,24,0	1/1:0,8:8:24.08:440,24,0	1/1:5,18:23:54.19:987,54,0	1/1:4,14:18:39.13:698,39,0	0/0:19,0:19:54.17:0,54,756	1/1:1,14:15:39.13:714,39,0	1/1:0,9:9:27.09:493,27,0	1/1:2,26:28:69.24:1257,69,0	1/1:0,10:10:30.10:549,30,0	1/1:2,17:19:51.17:930,51,0	1/1:1,14:15:39.13:713,39,0	1/1:0,10:10:27.09:489,27,0	0/0:27,0:27:81.27:0,81,1153	0/0:20,0:20:60.20:0,60,858	1/1:3,9:12:33.11:581,33,0	1/1:3,4:7:6.02:110,6,0	1/1:2,20:22:57.20:1042,57,0	1/1:2,8:10:21.07:384,21,0	1/1:3,11:14:30.10:543,30,0	1/1:4,19:24:44.84:823,45,0	1/1:2,3:5:9.03:164,9,0	1/1:1,17:18:51.13:889,51,0	1/1:2,16:18:45.15:821,45,0	1/1:0,3:3:9.03:165,9,0
chr10	29522802	.	GT	G	4623.53	PASS	AB=1.000;AC=43;AF=0.768;AN=56;BaseQRankSum=10.913;DP=588;FS=1.160;HRun=1;HaplotypeScore=130.5555;InbreedingCoeff=0.6922;MQ=85.75;MQ0=0;MQRankSum=-6.098;QD=9.82;ReadPosRankSum=7.340;VQSLOD=2.4073;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:44,0:44:57.90:423,58,0	1/1:6,0:6:16.71:81,17,0	0/0:28,0:28:83.41:0,83,1137	0/0:21,1:22:50.13:0,50,787	1/1:18,1:19:23.20:209,23,0	0/1:22,0:22:39.53:133,0,40	1/1:30,0:30:18.22:226,18,0	1/1:26,0:26:13.38:177,13,0	0/0:20,0:20:60.17:0,60,854	0/1:14,0:14:12.23:94,0,12	1/1:14,0:14:16.16:147,16,0	1/1:12,0:12:30.25:142,30,0	1/1:15,0:15:33.54:183,34,0	1/1:23,2:25:34.35:300,34,0	1/1:25,0:25:15.22:246,15,0	1/1:20,0:19:30.06:211,30,0	0/0:32,0:32:96.25:0,96,1367	0/0:15,0:15:45.10:0,45,629	1/1:13,0:13:32.81:127,33,0	1/1:16,0:16:25.09:169,25,0	1/1:35,0:35:28.40:279,28,0	1/1:25,0:25:60.81:293,61,0	1/1:21,0:21:27.93:216,28,0	1/1:23,0:23:50.63:255,51,0	1/1:20,0:20:30.99:259,31,0	0/1:24,0:24:21.18:141,0,21	1/1:13,0:13:36.31:181,36,0	1/1:9,0:9:25.27:127,25,0
chr10	29522803	.	TG	T	13987.57	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=7.748;DP=582;FS=0.000;HRun=4;HaplotypeScore=97.1762;InbreedingCoeff=0.9976;MQ=86.68;MQ0=0;MQRankSum=-8.484;QD=30.28;ReadPosRankSum=5.134;VQSLOD=4.5605;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,42:43:99:1292,108,0	1/1:0,6:6:18.06:216,18,0	0/0:29,0:29:84.25:0,84,1115	0/0:23,0:23:66.08:0,66,855	1/1:4,15:19:48.15:573,48,0	1/1:2,18:20:39.12:468,39,0	1/1:1,27:28:66.20:792,66,0	1/1:2,23:25:66.20:791,66,0	0/0:21,0:21:63.18:0,63,840	1/1:2,11:13:33.10:396,33,0	1/1:2,12:14:33.10:393,33,0	1/1:0,12:12:33.10:396,33,0	1/1:0,15:15:36.11:432,36,0	1/1:3,21:24:60.18:711,60,0	1/1:2,23:25:60.18:719,60,0	1/1:2,18:20:57.17:683,57,0	0/0:32,0:32:93.29:0,93,1272	0/0:15,0:15:42.14:0,42,584	1/1:1,12:13:39.12:467,39,0	1/1:1,15:16:45.14:540,45,0	1/1:2,33:35:78.24:936,78,0	1/1:2,22:24:66.20:790,66,0	1/1:1,20:21:54.16:647,54,0	1/1:0,23:23:54.17:647,54,0	1/1:1,19:20:54.16:645,54,0	1/1:4,20:24:57.16:673,57,0	1/1:1,12:13:39.11:458,39,0	1/1:0,9:9:27.08:324,27,0
chr10	29522807	.	GT	G	5250.79	PASS	AB=0.976;AC=42;AF=0.750;AN=56;BaseQRankSum=11.584;DP=576;FS=1.634;HRun=1;HaplotypeScore=124.5892;InbreedingCoeff=0.6676;MQ=88.16;MQ0=0;MQRankSum=-8.876;QD=11.51;ReadPosRankSum=7.046;VQSLOD=3.1581;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:44,0:44:59.66:446,60,0	1/1:6,0:6:16.81:83,17,0	0/0:30,0:30:90.19:0,90,1224	0/0:24,0:24:68.74:0,69,901	1/1:17,1:18:45.71:293,46,0	1/1:18,0:18:36.63:185,37,0	0/1:30,0:30:2.11:216,0,2	0/1:25,1:26:8.19:184,0,8	0/0:22,0:22:66.15:0,66,882	0/1:13,0:13:10.09:138,0,10	1/1:12,1:13:31.29:186,31,0	1/1:12,0:12:30.49:146,30,0	1/1:15,0:15:33.84:178,34,0	1/1:23,0:23:56.17:291,56,0	1/1:23,0:23:56.12:283,56,0	1/1:18,1:18:52.36:261,52,0	0/0:30,0:30:90.29:0,90,1294	0/0:14,0:14:42.14:0,42,614	0/1:15,1:16:12.67:119,0,13	1/1:15,0:15:42.64:225,43,0	1/1:34,0:34:50.83:320,51,0	1/1:24,1:25:19.17:303,19,0	1/1:20,0:20:51.34:289,51,0	1/1:23,0:23:50.71:263,51,0	1/1:19,0:19:51.87:318,52,0	1/1:21,0:21:30.21:202,30,0	1/1:13,1:14:36.72:196,37,0	1/1:9,0:9:25.22:126,25,0
chr10	29523035	.	T	TTTTAACATC	47277.60	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=8.928;DP=657;FS=2.249;HRun=0;HaplotypeScore=196.2395;InbreedingCoeff=0.9767;MQ=74.32;MQ0=0;MQRankSum=-15.071;QD=89.04;ReadPosRankSum=1.316;VQSLOD=5.2392;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:16,22:48:72.20:3199,72,0	1/1:2,3:5:9.03:353,9,0	0/0:26,0:26:72.19:0,72,1891	0/0:20,0:20:51.08:0,51,1248	1/1:8,16:27:54.11:2227,54,0	1/1:6,18:25:57.20:2818,57,0	1/1:2,12:16:27.09:1318,27,0	1/1:20,15:41:99:4497,114,0	0/0:29,0:29:81.28:0,81,2484	1/1:8,16:34:84.23:3175,84,0	1/1:8,13:22:54.10:2148,54,0	1/1:6,14:24:30.09:1368,30,0	1/1:9,17:27:51.13:2111,51,0	1/1:7,19:27:39.13:1927,39,0	1/1:6,15:23:39.13:1831,39,0	1/1:3,18:22:51.18:2436,51,0	0/0:37,0:37:99:0,108,3108	0/0:14,0:14:39.09:0,39,1146	1/1:9,18:29:57.11:2274,57,0	1/1:2,7:12:24.05:855,24,0	1/1:5,4:11:12.04:496,12,0	1/1:7,15:22:63.07:2388,63,0	1/1:6,14:20:54.17:2341,54,0	1/1:5,8:16:30.08:1451,30,0	1/1:2,10:13:30.10:1482,30,0	1/1:6,23:32:75.20:3292,75,0	1/1:9,17:28:51.18:2403,51,0	1/1:6,1:7:18.06:889,18,0
chr10	29523038	.	T	TAAC	6179.09	PASS	AB=1.000;AC=34;AF=0.607;AN=56;BaseQRankSum=14.109;DP=570;FS=6.100;HRun=0;HaplotypeScore=276.9998;InbreedingCoeff=0.0003;MQ=76.94;MQ0=0;MQRankSum=-14.908;QD=13.85;ReadPosRankSum=8.771;VQSLOD=3.1998;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:38,0:38:99:414,0,124	0/1:5,0:5:35.42:39,0,35	0/0:27,0:27:75.23:0,75,1245	0/0:19,0:19:51.15:0,51,858	0/1:21,0:21:34.27:311,0,34	1/1:21,0:21:7.16:504,7,0	1/1:14,0:14:26.56:234,27,0	0/1:33,0:33:99:420,0,217	0/0:30,0:30:90.31:0,90,1579	0/1:24,0:24:99:312,0,121	1/1:21,0:21:26.42:318,26,0	0/1:20,0:20:66.09:173,0,66	0/1:22,0:22:99:219,0,140	0/1:24,0:24:32.53:346,0,33	0/1:20,0:20:52.27:252,0,52	1/1:21,0:21:0.48:336,0,0	0/0:35,0:35:99:0,105,1852	0/0:13,0:13:36.12:0,36,635	0/1:22,0:22:89.93:131,0,90	1/1:8,0:8:14.99:138,15,0	0/1:8,0:8:38.02:61,0,38	1/1:18,4:22:1.04:343,1,0	1/1:22,0:22:9.37:377,9,0	1/1:13,0:13:1.26:149,1,0	1/1:12,0:12:29.94:259,30,0	0/1:26,0:26:88.32:393,0,88	1/1:22,0:22:26.85:314,27,0	1/1:7,0:7:17.92:138,18,0
chr10	29523418	.	GTC	G	4359.64	PASS	AB=0.969;AC=47;AF=0.839;AN=56;BaseQRankSum=6.994;DP=483;FS=20.384;HRun=0;HaplotypeScore=172.1077;InbreedingCoeff=0.6003;MQ=56.71;MQ0=18;MQRankSum=-3.908;QD=11.91;ReadPosRankSum=2.349;VQSLOD=2.9622;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:37,0:35:15.78:161,16,0	1/1:1,3:4:6.02:74,6,0	0/1:30,1:13:13.87:14,0,374	0/0:49,1:21:0.20:0,0,335	1/1:6,11:17:6.02:81,6,0	1/1:5,9:14:21.06:248,21,0	1/1:2,7:9:8.92:83,9,0	1/1:16,10:24:50.80:501,51,0	0/0:18,0:15:24.07:0,24,393	1/1:8,7:15:29.33:308,29,0	1/1:2,7:9:8.94:90,9,0	1/1:1,9:10:27.06:299,27,0	1/1:5,13:18:33.09:378,33,0	1/1:2,14:16:18.04:197,18,0	1/1:7,4:11:12.04:154,12,0	1/1:3,6:9:15.05:182,15,0	0/0:33,0:33:74.91:0,75,1162	0/0:16,0:16:31.87:0,32,520	1/1:3,3:6:14.98:164,15,0	1/1:5,6:11:14.70:147,15,0	1/1:14,8:22:9.03:109,9,0	1/1:6,13:19:24.03:256,24,0	1/1:2,7:9:3.01:33,3,0	1/1:8,11:19:2.99:31,3,0	1/1:6,6:12:6:51,6,0	1/1:5,12:16:42.13:509,42,0	1/1:9,8:16:15.04:176,15,0	1/1:5,3:7:9.03:114,9,0
chr10	29523422	.	C	CTG	5209.16	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=6.484;DP=451;FS=19.951;HRun=0;HaplotypeScore=162.8687;InbreedingCoeff=0.7881;MQ=56.76;MQ0=19;MQRankSum=-3.288;QD=16.97;ReadPosRankSum=1.840;VQSLOD=3.4481;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:30,5:33:22.55:198,23,0	1/1:4,0:4:6.02:89,6,0	0/0:29,0:12:20.20:0,20,369	0/0:50,0:21:17.66:0,18,319	1/1:15,0:14:6:64,6,0	1/1:11,1:12:20.88:275,21,0	1/1:7,1:8:8.86:111,9,0	1/1:16,7:21:54.06:768,54,0	0/0:18,0:15:24.07:0,24,346	1/1:11,1:12:29.69:356,30,0	1/1:9,0:9:8.51:73,9,0	1/1:10,0:10:27.09:418,27,0	1/1:16,2:18:32.98:444,33,0	1/1:15,1:16:17.95:248,18,0	1/1:8,0:8:11.66:94,12,0	1/1:9,0:9:14.88:179,15,0	0/0:30,0:30:74.71:0,75,1048	0/0:16,0:16:37.61:0,38,503	1/1:5,1:6:15.05:223,15,0	1/1:10,1:11:14.64:177,15,0	1/1:18,2:20:8.92:114,9,0	1/1:16,3:19:23.85:311,24,0	1/1:9,0:9:3.01:48,3,0	1/1:14,3:17:2.97:25,3,0	1/1:10,1:11:6.01:66,6,0	1/1:17,0:16:41.72:618,42,0	1/1:11,1:11:14.89:180,15,0	1/1:6,0:5:9.03:128,9,0
chr10	29523426	.	GTC	G	2495.06	PASS	AB=0.992;AC=47;AF=0.839;AN=56;BaseQRankSum=7.097;DP=430;FS=11.812;HRun=0;HaplotypeScore=164.2041;InbreedingCoeff=0.4242;MQ=49.72;MQ0=18;MQRankSum=-2.857;QD=6.85;ReadPosRankSum=0.748;VQSLOD=2.8832;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:38,0:36:2.38:69,0,2	1/1:0,3:3:3:27,3,0	0/1:27,0:10:12.17:12,0,140	0/1:42,1:14:0.12:0,0,212	1/1:2,11:12:2.94:18,3,0	1/1:3,9:12:17.99:156,18,0	1/1:2,6:8:5.60:36,6,0	1/1:10,9:17:47.10:389,47,0	0/0:18,0:15:24.08:0,24,396	1/1:5,6:11:23.71:214,24,0	1/1:2,7:9:5.89:40,6,0	1/1:1,9:10:23.93:201,24,0	1/1:6,12:18:28.53:251,29,0	1/1:3,13:16:17.98:150,18,0	1/1:3,4:7:3:26,3,0	1/1:3,6:9:14.98:128,15,0	0/0:30,0:30:64.10:0,64,1081	0/0:18,0:18:31.83:0,32,524	1/1:2,3:5:1.62:92,2,0	1/1:4,6:10:11.04:92,11,0	1/1:10,8:18:6.01:56,6,0	1/1:6,13:19:14.95:118,15,0	1/1:1,7:8:3:25,3,0	1/1:9,10:19:2.87:30,3,0	1/1:3,6:9:3:25,3,0	1/1:3,13:15:36.07:364,36,0	1/1:4,8:11:11.98:99,12,0	1/1:2,3:4:3:29,3,0
chr10	29523434	.	GTC	G	1719.57	PASS	AC=40;AF=0.769;AN=52;BaseQRankSum=8.236;DP=372;FS=1.502;HRun=0;HaplotypeScore=148.9504;InbreedingCoeff=0.6148;MQ=43.33;MQ0=17;MQRankSum=-5.327;QD=7.85;ReadPosRankSum=2.661;VQSLOD=3.1464;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:37,0:35:10.54:35,11,0	1/1:1,2:3:3:29,3,0	0/0:18,0:6:5.38:0,5,50	0/0:35,0:10:6.08:0,6,84	./.	1/1:2,8:10:15.02:140,15,0	1/1:2,5:7:5.68:39,6,0	1/1:15,3:16:22.77:142,23,0	0/0:17,0:14:20.95:0,21,284	1/1:3,5:8:10.23:137,10,0	1/1:0,7:7:3:25,3,0	1/1:0,9:9:23.90:210,24,0	1/1:3,10:13:19.11:134,19,0	1/1:3,11:14:12:107,12,0	1/1:1,3:4:3:27,3,0	1/1:2,5:7:9.01:85,9,0	0/0:30,0:30:63.63:0,64,938	0/0:17,0:17:33.94:0,34,498	1/1:6,2:8:10.42:77,10,0	1/1:3,6:9:3:29,3,0	1/1:6,7:13:6.01:62,6,0	1/1:3,13:16:14.43:91,14,0	1/1:3,4:7:3:27,3,0	0/0:9,8:17:0:0,0,0	./.	1/1:2,12:13:36.10:396,36,0	1/1:2,8:9:6.01:55,6,0	1/1:3,2:3:3.01:31,3,0
chr10	29524193	.	CAGA	C	407.45	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.299;DP=561;FS=8.815;HRun=0;HaplotypeScore=80.3623;InbreedingCoeff=0.9933;MQ=93.63;MQ0=0;MQRankSum=-2.204;QD=31.34;ReadPosRankSum=1.617;VQSLOD=3.7683;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:81.21:0,81,1663	0/0:8,0:8:24.08:0,24,530	0/0:30,0:29:65.01:0,65,1239	0/0:23,0:23:60.19:0,60,1170	0/0:15,0:15:42.14:0,42,877	0/0:29,0:29:81.28:0,81,1783	0/0:15,0:15:45.15:0,45,932	0/0:17,0:17:45.15:0,45,958	1/1:2,11:13:33.07:502,33,0	0/0:27,0:27:72.25:0,72,1561	0/0:24,0:24:72.25:0,72,1571	0/0:14,0:14:42.14:0,42,913	0/0:19,0:19:51.18:0,51,1112	0/0:18,0:18:54.16:0,54,1094	0/0:27,0:27:78.27:0,78,1701	0/0:14,0:14:33.10:0,33,682	0/0:16,0:16:42.14:0,42,927	0/0:23,0:23:69.24:0,69,1515	0/0:15,0:15:45.15:0,45,987	0/0:27,0:27:78.27:0,78,1700	0/0:21,0:21:63.20:0,63,1349	0/0:16,0:16:39.13:0,39,838	0/0:25,0:25:66.23:0,66,1415	0/0:18,0:18:48.16:0,48,1032	0/0:21,0:21:54.19:0,54,1193	0/0:23,0:23:63.22:0,63,1365	0/0:26,0:25:69.22:0,69,1480	0/0:8,0:8:21.07:0,21,464
chr10	29524455	.	T	TGGG	7462.60	PASS	AB=0.852;AC=49;AF=0.875;AN=56;BaseQRankSum=-4.074;DP=460;FS=4.970;HRun=0;HaplotypeScore=100.4137;InbreedingCoeff=0.4925;MQ=81.76;MQ0=2;MQRankSum=-6.648;QD=18.66;ReadPosRankSum=4.375;VQSLOD=4.0960;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:33.10:0,33,401	1/1:0,4:5:2.93:59,3,0	0/0:44,0:29:49.88:0,50,880	0/1:34,0:28:0.80:1,0,742	1/1:5,10:21:4.70:319,5,0	1/1:14,0:17:11.88:152,12,0	1/1:8,3:15:25.71:426,26,0	1/1:14,1:16:31.48:380,31,0	1/1:3,0:17:4.27:101,4,0	1/1:18,5:24:36.01:499,36,0	0/1:9,0:9:0.45:16,0,0	1/1:4,8:12:27.08:494,27,0	1/1:7,3:10:9.80:228,10,0	1/1:11,4:16:26.21:463,26,0	1/1:0,9:13:30.06:558,30,0	1/1:1,10:14:30.10:580,30,0	1/1:9,0:25:59.70:522,60,0	1/1:0,0:9:21.04:210,21,0	1/1:11,3:14:20.06:325,20,0	1/1:3,10:16:18.33:342,18,0	0/1:3,3:14:0.05:49,0,0	1/1:10,3:15:22.28:328,22,0	1/1:13,0:14:2.51:31,3,0	1/1:5,5:9:3:59,3,0	1/1:15,3:18:21.64:370,22,0	1/1:8,2:9:14.92:286,15,0	1/1:15,8:23:20.46:608,20,0	1/1:0,3:6:3.01:59,3,0
chr10	29524456	.	T	TGGGG	9429.65	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-5.338;DP=439;FS=2.356;HRun=7;HaplotypeScore=106.7642;InbreedingCoeff=0.6373;MQ=81.52;MQ0=2;MQRankSum=-6.046;QD=27.33;ReadPosRankSum=2.675;VQSLOD=1.7149;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:0,0:16:0.40:0,0,6	1/1:5,0:5:2.44:58,2,0	0/0:45,0:30:34.04:0,34,662	0/0:32,0:27:35.55:0,36,595	1/1:19,0:19:20.97:364,21,0	1/1:5,1:16:14.84:300,15,0	1/1:13,0:20:37.01:745,37,0	1/1:18,3:21:39.03:574,39,0	1/1:18,0:18:24.22:102,24,0	1/1:21,1:22:31.26:585,31,0	1/1:6,0:6:4.37:51,4,0	1/1:13,0:14:39.07:685,39,0	1/1:4,3:7:11.95:242,12,0	1/1:12,3:15:33.10:553,33,0	1/1:13,0:13:36.12:641,36,0	1/1:11,1:12:33.11:624,33,0	1/1:22,0:22:51.13:498,51,0	1/1:9,0:9:24:223,24,0	1/1:9,2:11:24.50:452,24,0	1/1:14,1:15:24.04:434,24,0	1/1:10,0:9:11.99:200,12,0	1/1:9,5:14:24.07:378,24,0	1/1:2,0:13:2.13:29,2,0	1/1:6,4:9:3.48:59,3,0	1/1:6,10:16:18.06:387,18,0	1/1:4,5:10:24.97:472,25,0	1/1:16,2:19:39.99:717,40,0	1/1:5,0:5:3.01:58,3,0
chr10	29526612	.	A	AATAG	11193.95	PASS	AB=0.827;AC=50;AF=0.926;AN=54;BaseQRankSum=-1.675;DP=630;FS=6.980;HRun=0;HaplotypeScore=96.8985;InbreedingCoeff=0.1352;MQ=60.22;MQ0=4;MQRankSum=1.176;QD=18.47;ReadPosRankSum=0.729;VQSLOD=3.9599;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:26:9.17:173,0,9	1/1:4,9:15:14.97:297,15,0	./.	0/0:15,0:12:0.47:0,0,1	1/1:18,14:32:36.12:774,36,0	1/1:15,14:29:24.08:563,24,0	1/1:7,2:11:6.02:141,6,0	1/1:33,0:31:2.97:20,3,0	1/1:10,2:23:12.04:206,12,0	0/1:16,13:29:4.23:715,0,4	1/1:9,17:27:45.07:950,45,0	1/1:18,1:27:9.03:131,9,0	1/1:7,10:17:15.05:350,15,0	1/1:9,2:26:21.06:344,21,0	1/1:7,16:23:39.13:895,39,0	1/1:13,7:30:12.04:214,12,0	1/1:16,0:16:14.74:98,15,0	1/1:18,0:18:3.58:8,4,0	1/1:9,6:15:18.02:328,18,0	1/1:13,14:28:27.09:611,27,0	1/1:11,8:20:15.05:352,15,0	1/1:8,11:19:24.08:560,24,0	1/1:16,0:24:11.06:142,11,0	1/1:7,1:11:3:28,3,0	1/1:6,20:26:42.14:982,42,0	1/1:16,21:37:63.19:1327,63,0	1/1:14,15:29:30.10:703,30,0	1/1:6,8:14:12.04:281,12,0
chr10	29526889	.	TAC	T	5781.44	PASS	AB=0.851;AC=38;AF=0.679;AN=56;BaseQRankSum=-7.744;DP=1640;FS=35.180;HRun=0;HaplotypeScore=252.3338;InbreedingCoeff=0.3725;MQ=29.09;MQ0=136;MQRankSum=3.522;QD=4.60;ReadPosRankSum=3.491;VQSLOD=2.4674;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:95,0:67:32.49:0,32,213	0/1:15,4:17:11.17:90,0,11	0/0:22,0:7:2.99:0,3,24	0/0:31,0:13:3.73:0,4,16	1/1:25,12:32:33.03:370,33,0	1/1:31,15:29:1.88:297,2,0	1/1:29,15:28:10.58:113,11,0	1/1:53,4:29:27.91:347,28,0	0/0:77,1:41:14.44:0,14,206	1/1:84,8:64:1.96:805,2,0	1/1:29,10:30:27.06:303,27,0	1/1:65,11:54:22.35:282,22,0	0/1:48,6:39:17.22:102,0,17	1/1:74,9:67:12.69:222,13,0	0/1:78,10:54:6.87:161,0,7	1/1:66,9:49:17.85:189,18,0	0/0:66,2:46:10.72:0,11,192	0/0:62,1:42:35.98:0,36,314	1/1:31,5:17:26.81:285,27,0	0/1:35,10:38:32.03:189,0,32	1/1:92,9:72:26.59:286,27,0	1/1:36,7:35:3.01:36,3,0	1/1:22,8:24:11.73:104,12,0	1/1:102,5:61:11.66:144,12,0	1/1:27,11:34:30.07:341,30,0	0/1:49,22:45:6.58:549,0,7	0/1:47,6:37:60:267,0,60	1/1:10,6:13:26.29:298,26,0
chr10	29526907	.	CAT	C	2426.81	PASS	AB=0.934;AC=36;AF=0.692;AN=52;BaseQRankSum=-4.707;DP=1769;FS=2.295;HRun=0;HaplotypeScore=254.8110;InbreedingCoeff=-0.1483;MQ=25.55;MQ0=182;MQRankSum=2.567;QD=1.53;ReadPosRankSum=1.127;VQSLOD=2.2788;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:113,3:66:26.06:26,0,105	1/1:12,0:12:2.32:32,2,0	./.	./.	1/1:44,0:36:23.80:114,24,0	0/1:51,5:36:1.12:85,0,1	0/1:53,1:27:10.17:23,0,10	0/1:69,0:27:80.51:81,0,202	0/0:65,12:39:20.88:0,21,244	0/1:83,5:59:9.34:418,0,9	1/1:47,0:37:18.97:84,19,0	1/1:78,4:58:21.45:109,21,0	0/1:56,5:42:59.30:91,0,59	1/1:72,12:60:20.91:136,21,0	0/1:89,10:60:24.59:54,0,25	1/1:73,8:48:14.47:81,14,0	0/0:83,3:52:2.78:0,3,233	0/1:66,4:42:82.56:83,0,247	0/1:41,3:21:29.40:114,0,29	0/1:39,2:33:34.24:56,0,34	1/1:118,4:76:24.92:142,25,0	1/1:41,2:32:2.68:11,3,0	1/1:28,0:19:8.32:43,8,0	1/1:125,7:71:10.34:48,10,0	1/1:39,1:34:21.58:106,22,0	0/1:69,7:45:16.56:406,0,17	0/1:54,4:37:70.55:147,0,71	1/1:16,0:13:8.46:93,8,0
chr10	29526937	.	C	CAT	496.39	PASS	AB=0.992;AC=22;AF=0.440;AN=50;BaseQRankSum=0.144;DP=2103;FS=44.302;HRun=0;HaplotypeScore=280.6794;InbreedingCoeff=-0.2412;MQ=21.28;MQ0=323;MQRankSum=-1.213;QD=0.37;ReadPosRankSum=4.671;VQSLOD=1.4158;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:125,0:62:38.76:39,0,79	0/1:9,0:6:3.21:21,0,3	./.	./.	0/1:45,0:32:14.40:14,0,37	0/1:59,0:36:33.39:33,0,34	./.	0/1:86,0:24:45.42:45,0,255	0/1:96,1:45:55.95:68,0,56	0/1:111,1:64:0.24:0,0,611	1/1:40,0:34:5.83:44,6,0	0/1:87,0:56:6.04:6,0,46	0/1:91,1:52:36.85:51,0,37	0/1:84,2:54:7.60:8,0,20	0/0:134,1:69:7.98:0,8,77	1/1:113,0:62:9.87:73,10,0	0/1:101,0:61:29.01:29,0,266	0/0:85,0:47:49.88:0,50,523	0/1:89,1:21:66.89:67,0,166	0/0:48,0:34:12.36:0,12,107	0/0:164,2:93:1.07:0,1,77	1/1:59,0:40:2.98:22,3,0	0/0:34,0:23:5.98:0,6,47	0/0:148,0:79:2.97:0,3,22	0/1:43,0:34:15.03:36,0,15	0/1:99,0:45:57.31:57,0,580	0/0:61,0:32:2.24:0,2,178	1/1:11,0:8:2.51:27,3,0
chr10	29526939	.	CACACACAT	C	2345.33	PASS	AB=0.982;AC=29;AF=0.604;AN=48;BaseQRankSum=-4.362;DP=2118;FS=36.346;HRun=0;HaplotypeScore=298.5114;InbreedingCoeff=-0.2394;MQ=20.97;MQ0=336;MQRankSum=-0.157;QD=1.38;ReadPosRankSum=-3.490;VQSLOD=0.8627;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:128,0:64:0.63:1,0,122	0/1:9,0:6:8.56:44,0,9	./.	./.	1/1:42,3:32:8.99:85,9,0	1/1:58,1:36:10.72:95,11,0	./.	0/1:86,2:21:29.88:371,0,30	0/0:100,0:46:17.12:0,17,211	0/1:112,2:65:99:303,0,387	1/1:38,2:34:8.20:83,8,0	1/1:82,3:53:4.77:22,5,0	0/1:92,0:53:22.33:90,0,22	0/0:87,1:54:1.98:0,2,15	0/0:132,2:67:4.78:0,5,54	0/1:103,8:61:10.01:76,0,10	0/1:102,0:62:99:153,0,279	0/1:85,0:47:99:210,0,570	0/1:94,0:20:96.01:100,0,96	0/1:45,3:34:16.66:17,0,134	0/1:168,0:92:36.18:164,0,36	1/1:54,4:39:2.98:22,3,0	./.	1/1:149,2:79:2.82:47,3,0	1/1:42,0:33:5.27:21,5,0	0/1:96,3:46:99:487,0,628	0/1:59,2:32:40.48:40,0,82	1/1:11,0:8:11.12:61,11,0
chr10	29526943	.	CACAT	C	975.21	PASS	AB=0.996;AC=27;AF=0.563;AN=48;BaseQRankSum=-1.245;DP=2144;FS=16.202;HRun=0;HaplotypeScore=279.4978;InbreedingCoeff=-0.2849;MQ=20.71;MQ0=345;MQRankSum=-0.725;QD=0.61;ReadPosRankSum=-4.586;VQSLOD=0.6509;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:125,1:62:2.06:0,2,223	0/1:11,0:8:6.03:6,0,24	./.	./.	1/1:45,0:32:3.36:43,3,0	1/1:63,0:37:5.42:23,5,0	./.	0/1:89,0:19:43.64:164,0,44	0/0:97,1:45:17.70:0,18,201	0/1:111,0:60:99:176,0,353	1/1:41,0:35:8.96:69,9,0	1/1:85,0:53:4.32:23,4,0	0/1:98,0:56:16.27:77,0,16	0/0:88,1:55:0.39:0,0,1	0/0:133,1:67:2.87:0,3,44	0/1:112,0:60:16.96:71,0,17	0/1:103,0:62:12.39:12,0,247	0/1:83,1:47:43.01:43,0,460	0/1:95,0:20:43.51:44,0,97	0/1:50,0:35:37.36:37,0,120	0/1:177,0:97:1.87:2,0,53	1/1:60,0:41:2.98:22,3,0	./.	1/1:151,1:80:0.08:1,0,0	1/1:43,0:34:1.51:19,2,0	0/1:97,1:45:99:168,0,635	0/1:56,1:29:72.01:72,0,79	0/1:12,0:9:14.95:37,0,15
chr10	29526945	.	CAT	C	1281.47	PASS	AB=0.987;AC=27;AF=0.563;AN=48;BaseQRankSum=-2.003;DP=2137;FS=13.579;HRun=0;HaplotypeScore=266.7820;InbreedingCoeff=-0.2708;MQ=20.63;MQ0=346;MQRankSum=0.619;QD=0.77;ReadPosRankSum=-5.516;VQSLOD=0.2968;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:121,0:64:6.19:0,6,158	0/0:10,1:8:3.01:0,3,46	./.	./.	1/1:45,0:32:8.53:65,9,0	0/1:62,0:36:3.54:6,0,4	./.	0/1:88,0:19:32.97:207,0,33	0/0:99,0:46:14.86:0,15,167	0/1:109,2:61:99:205,0,313	1/1:40,0:35:8.96:69,9,0	1/1:82,3:54:4.67:25,5,0	0/1:96,3:57:16.48:143,0,16	0/1:85,2:54:8.78:11,0,9	0/0:137,0:68:2.33:0,2,43	0/1:107,0:59:12.84:71,0,13	0/1:100,2:62:81.62:82,0,224	0/1:84,1:47:89.64:90,0,357	0/1:97,0:19:44.65:55,0,45	0/1:47,1:34:37.96:38,0,95	0/1:175,2:97:41:58,0,41	1/1:56,1:39:2.98:22,3,0	./.	1/1:150,1:79:0.51:1,1,0	1/1:43,0:34:1.80:20,2,0	0/1:98,2:45:99:159,0,506	0/1:56,0:28:62.68:63,0,71	1/1:12,0:9:2.85:31,3,0
chr10	29526947	.	T	TACAC	2800.22	PASS	AB=0.948;AC=26;AF=0.565;AN=46;BaseQRankSum=-3.550;DP=2119;FS=32.252;HRun=0;HaplotypeScore=271.6395;InbreedingCoeff=-0.0878;MQ=20.51;MQ0=346;MQRankSum=-0.834;QD=1.90;ReadPosRankSum=-2.726;VQSLOD=1.1218;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:112,0:63:25.07:0,25,230	0/1:9,2:8:12.95:65,0,13	./.	./.	1/1:39,3:31:3.01:38,3,0	1/1:56,3:35:3.58:50,4,0	./.	0/1:87,0:19:13.60:306,0,14	0/0:90,0:44:18.89:0,19,148	0/1:100,3:59:99:443,0,261	1/1:28,7:33:3.01:63,3,0	1/1:77,2:52:3.68:14,4,0	1/1:94,3:58:20.87:168,21,0	0/0:82,3:55:2.54:0,3,15	0/0:111,10:65:2.33:0,2,9	1/1:101,3:59:2.61:122,3,0	0/1:95,2:62:99:295,0,203	0/1:79,0:46:99:112,0,374	0/1:89,3:19:52.10:309,0,52	0/0:42,3:34:1.39:0,1,96	0/1:169,0:98:19.11:203,0,19	./.	./.	1/1:126,2:79:3:48,3,0	0/1:35,7:34:0.02:0,0,0	0/1:87,2:44:99:451,0,417	0/1:47,4:29:28.30:108,0,28	1/1:13,1:11:11.94:144,12,0
chr10	29526957	.	CAT	C	139.35	PASS	AB=0.984;AC=14;AF=0.269;AN=52;BaseQRankSum=4.826;DP=2093;FS=5.756;HRun=0;HaplotypeScore=246.2499;InbreedingCoeff=-0.1412;MQ=20.78;MQ0=325;MQRankSum=-2.567;QD=0.16;ReadPosRankSum=-0.855;VQSLOD=2.0359;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:128,0:64:19.25:0,19,473	0/0:13,0:10:5.18:0,5,26	1/1:10,0:3:4.07:12,4,0	0/1:6,0:2:1.61:2,0,3	0/0:41,0:29:8.98:0,9,73	0/1:59,0:33:4.37:4,0,43	./.	0/0:80,0:18:17.80:0,18,326	0/0:94,4:46:14.23:0,14,337	0/1:109,1:62:14.55:15,0,736	0/0:33,0:29:2.68:0,3,11	0/1:72,4:48:3.14:3,0,32	0/1:97,3:58:56.92:59,0,57	0/0:92,3:57:4.90:0,5,21	0/0:131,2:68:5.11:0,5,23	0/1:102,1:54:27.08:27,0,59	0/0:101,0:63:17.33:0,17,451	0/1:84,1:47:45.94:46,0,386	0/1:85,0:21:23.66:24,0,156	0/0:45,1:33:8.76:0,9,132	0/0:175,0:94:33.06:0,33,286	0/0:57,0:41:5.99:0,6,50	./.	0/0:151,0:77:6.46:0,6,67	0/1:41,0:32:0:0,0,0	0/1:100,1:45:8.64:9,0,470	0/1:51,3:29:58.28:58,0,72	0/1:14,0:11:12.51:13,0,30
chr10	29526973	.	CACAT	C	120.27	PASS	AB=0.927;AC=6;AF=0.115;AN=52;BaseQRankSum=7.444;DP=1731;FS=41.595;HRun=0;HaplotypeScore=199.8676;InbreedingCoeff=0.0833;MQ=21.54;MQ0=234;MQRankSum=-2.301;QD=0.34;ReadPosRankSum=-1.357;VQSLOD=0.9817;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:87,9:55:18.94:0,19,848	0/0:11,0:9:2.98:0,3,21	0/0:31,0:6:16.87:0,17,341	0/0:24,0:4:12.03:0,12,217	0/0:40,0:30:9.03:0,9,243	0/0:49,1:28:2.96:0,3,82	./.	0/0:85,0:28:62.81:0,63,1198	0/0:65,2:36:18.06:0,18,473	0/0:89,4:57:8.08:0,8,1664	0/0:25,0:22:3.01:0,3,78	0/0:57,1:41:5.45:0,5,73	0/1:78,5:49:11.22:11,0,260	0/0:65,6:41:3.74:0,4,32	1/1:99,3:53:2.94:18,3,0	0/0:66,6:39:4.95:0,5,191	0/1:66,9:48:48.04:48,0,573	0/1:59,5:38:99:148,0,236	0/0:53,1:22:11.14:0,11,408	0/0:45,0:34:8.68:0,9,153	0/0:156,6:81:28.83:0,29,942	0/0:50,1:35:6.02:0,6,162	./.	0/0:109,9:64:6.49:0,6,161	0/1:31,2:27:0:0,0,0	0/0:78,2:36:35.01:0,35,860	0/0:47,0:27:11.56:0,12,249	0/0:14,1:14:6.60:0,7,154
chr10	29526975	.	CAT	C	239.69	PASS	AB=0.938;AC=9;AF=0.173;AN=52;BaseQRankSum=7.732;DP=1680;FS=54.580;HRun=0;HaplotypeScore=185.0074;InbreedingCoeff=-0.0277;MQ=21.67;MQ0=228;MQRankSum=-2.914;QD=0.43;ReadPosRankSum=-0.845;VQSLOD=0.7858;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:79,13:52:34.17:0,34,638	0/0:11,0:9:2.22:0,2,7	0/0:31,0:6:15.94:0,16,285	0/0:26,0:4:12:0,12,191	0/0:38,2:30:9.03:0,9,173	0/0:44,2:28:4.66:0,5,62	./.	0/0:88,0:28:62.77:0,63,965	0/0:62,1:35:18.06:0,18,346	0/1:90,2:56:71.16:71,0,1178	0/0:26,0:22:3.01:0,3,58	0/0:55,1:40:5.75:0,6,56	0/1:78,2:46:9.67:10,0,181	0/0:64,1:38:2.46:0,2,11	1/1:98,2:52:2.98:21,3,0	0/0:69,2:39:5.01:0,5,131	0/1:66,7:47:49.16:49,0,350	0/1:52,6:35:97.89:98,0,163	0/1:43,3:21:37.91:38,0,310	0/0:44,1:34:8.96:0,9,128	0/0:137,18:80:35.80:0,36,685	0/0:48,0:34:6.02:0,6,116	./.	0/0:103,12:63:6.49:0,6,114	0/1:30,3:26:0:0,0,0	0/1:73,3:35:75.58:76,0,623	0/0:39,7:27:6.98:0,7,199	0/0:15,0:14:11.36:0,11,114
chr10	29526997	.	CAG	C	1145.35	PASS	AB=0.989;AC=29;AF=0.558;AN=52;BaseQRankSum=5.377;DP=1393;FS=38.347;HRun=0;HaplotypeScore=144.8239;InbreedingCoeff=0.0689;MQ=22.24;MQ0=217;MQRankSum=-1.496;QD=1.08;ReadPosRankSum=4.142;VQSLOD=0.9630;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:65,0:41:39.06:0,39,693	1/1:12,0:9:2.94:18,3,0	0/0:31,0:6:14.92:0,15,112	0/0:26,0:4:5.11:0,5,90	1/1:37,0:28:8.56:43,9,0	1/1:38,0:22:5.70:28,6,0	./.	0/1:71,0:24:4.87:5,0,239	0/0:63,1:36:16.60:0,17,231	0/1:71,4:47:99:352,0,144	1/1:25,0:17:2.80:13,3,0	0/1:40,0:31:6.70:7,0,140	0/1:64,2:39:5.49:127,0,5	1/1:50,1:27:3.95:13,4,0	0/1:77,0:34:0:0,0,0	0/1:59,0:33:4.86:37,0,5	0/1:53,1:36:51.05:51,0,197	0/1:42,0:25:82.21:82,0,154	0/0:41,0:14:18.93:0,19,211	1/1:42,1:29:5.82:33,6,0	0/1:143,1:76:44.61:148,0,45	1/1:45,0:31:5.54:32,6,0	./.	1/1:68,1:40:5.78:30,6,0	0/0:24,1:19:2.35:0,2,8	0/1:62,1:32:33.17:164,0,33	0/1:36,0:21:22.11:22,0,23	1/1:9,1:10:11.92:99,12,0
chr10	29526999	.	GAC	G	1889.47	PASS	AB=0.859;AC=24;AF=0.480;AN=50;BaseQRankSum=-2.058;DP=1378;FS=16.043;HRun=0;HaplotypeScore=138.0840;InbreedingCoeff=0.2292;MQ=22.25;MQ0=220;MQRankSum=-0.364;QD=2.18;ReadPosRankSum=4.481;VQSLOD=1.1669;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:64,0:40:42.01:0,42,584	0/1:11,2:10:4.86:5,0,20	./.	0/0:26,0:4:3.01:0,3,41	1/1:24,13:28:9.03:113,9,0	1/1:29,8:20:6.01:64,6,0	./.	0/1:75,0:22:15.41:15,0,88	0/0:61,0:34:16.01:0,16,138	0/1:69,7:48:90.46:550,0,90	1/1:19,7:16:3.01:38,3,0	0/0:34,6:32:12.02:0,12,148	0/1:48,13:37:12.98:189,0,13	0/0:34,15:28:0.47:0,0,1	0/1:65,13:38:0:0,0,0	0/1:43,14:32:23.70:72,0,24	0/0:48,0:33:13.08:0,13,150	0/0:43,0:25:9.44:0,9,146	0/0:42,1:15:20.79:0,21,219	1/1:30,12:28:6.02:74,6,0	0/1:129,18:75:13.55:376,0,14	1/1:36,6:28:5.96:75,6,0	./.	1/1:59,8:39:6.02:75,6,0	0/0:16,8:19:2.20:0,2,7	1/1:53,8:30:7.37:265,7,0	1/1:29,7:21:6.02:75,6,0	0/1:6,4:10:6.61:61,0,7
chr10	29527013	.	CAG	C	1217.98	PASS	AB=0.992;AC=28;AF=0.560;AN=50;BaseQRankSum=0.830;DP=1308;FS=21.737;HRun=0;HaplotypeScore=142.9630;InbreedingCoeff=-0.2402;MQ=22.91;MQ0=215;MQRankSum=-1.239;QD=1.10;ReadPosRankSum=3.467;VQSLOD=1.3516;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:63,0:43:39.26:0,39,476	0/1:12,1:11:5.23:5,0,28	./.	./.	1/1:36,0:27:8.48:41,8,0	0/1:38,0:19:14.24:20,0,14	./.	1/1:55,0:9:5.75:31,6,0	0/1:55,0:32:27.97:28,0,35	0/1:82,1:52:99:416,0,180	1/1:22,0:13:2.80:13,3,0	0/1:36,0:24:5.73:6,0,189	0/1:57,0:33:17.14:109,0,17	0/1:55,1:32:16.08:16,0,17	0/1:66,0:36:0.03:0,0,0	0/1:51,0:32:27.21:29,0,27	0/1:44,0:28:49.25:49,0,105	0/1:38,0:22:78.96:84,0,79	0/0:43,0:11:20.74:0,21,179	1/1:44,1:33:5.83:34,6,0	0/1:164,2:90:51.17:143,0,51	1/1:39,2:32:5.57:52,6,0	0/1:42,1:33:0:0,0,0	0/1:55,0:26:9.35:17,0,9	0/0:27,0:21:2.35:0,2,8	0/1:53,0:29:13.39:169,0,13	0/1:43,0:28:16.53:17,0,31	1/1:14,0:14:15.52:85,16,0
chr10	29527015	.	GAC	G	83.77	PASS	AB=0.996;AC=11;AF=0.220;AN=50;BaseQRankSum=-1.829;DP=1297;FS=26.634;HRun=0;HaplotypeScore=147.9062;InbreedingCoeff=0.1587;MQ=23.02;MQ0=212;MQRankSum=0.277;QD=0.20;ReadPosRankSum=2.203;VQSLOD=1.0934;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:62,0:44:19.17:0,19,254	0/0:14,0:12:5.38:0,5,49	./.	./.	0/0:33,0:26:6.90:0,7,27	0/0:37,0:18:5.44:0,5,46	./.	0/0:51,0:8:5:0,5,26	1/1:41,9:29:7.10:117,7,0	0/1:80,0:48:35.54:36,0,253	0/0:25,0:15:2.74:0,3,12	0/0:39,0:25:14.97:0,15,142	0/1:55,0:33:13.29:13,0,59	0/0:53,2:32:7.56:0,8,70	0/0:70,0:39:2.74:0,3,23	0/0:50,0:31:11.63:0,12,86	0/1:45,0:30:0.83:1,0,83	0/0:37,0:22:2.88:0,3,71	0/0:40,0:10:16.76:0,17,157	1/1:45,0:33:0.89:2,1,0	0/0:167,0:93:15.37:0,15,140	1/1:41,0:32:4.02:17,4,0	0/1:44,0:33:0:0,0,0	0/0:56,0:27:5.27:0,5,21	0/0:24,1:22:2.46:0,2,9	0/1:49,1:27:14.05:14,0,58	0/0:44,0:28:1:0,1,65	0/0:15,0:15:4.23:0,4,20
chr10	29527031	.	CAG	C	612.82	PASS	AB=0.986;AC=21;AF=0.420;AN=50;BaseQRankSum=-0.622;DP=1315;FS=15.409;HRun=0;HaplotypeScore=141.5838;InbreedingCoeff=-0.2049;MQ=22.66;MQ0=223;MQRankSum=-2.211;QD=0.65;ReadPosRankSum=2.056;VQSLOD=1.9568;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:33:15.46:0,15,148	0/1:17,1:16:6.82:7,0,17	./.	./.	0/1:37,1:29:15.04:15,0,17	0/0:35,0:17:5.96:0,6,35	./.	0/1:36,0:2:0:0,0,0	0/1:51,0:29:2.68:33,0,3	0/1:81,1:47:99:200,0,193	0/0:36,0:23:2.97:0,3,25	0/0:39,0:23:3.98:0,4,185	0/1:56,0:31:16.49:16,0,77	0/1:57,2:37:3.83:4,0,18	0/1:54,1:36:0.03:1,0,0	0/1:47,0:31:16.68:17,0,45	0/1:40,0:23:29.35:29,0,64	0/1:33,0:20:39.88:40,0,41	0/1:42,0:17:10.03:10,0,134	0/0:43,0:32:5.83:0,6,34	0/1:200,4:103:65.76:66,0,111	1/1:47,1:39:5.64:56,6,0	0/0:46,1:34:1.25:0,1,3	0/0:65,0:28:3.99:0,4,40	1/1:34,0:28:2.37:8,2,0	0/1:44,0:21:75.05:93,0,75	0/1:35,2:26:16.27:60,0,16	1/1:18,1:19:17.66:94,18,0
chr10	29527033	.	GAC	G	891.60	PASS	AB=0.931;AC=18;AF=0.375;AN=48;BaseQRankSum=-3.058;DP=1317;FS=7.435;HRun=0;HaplotypeScore=141.4882;InbreedingCoeff=-0.2059;MQ=22.71;MQ0=229;MQRankSum=-0.515;QD=1.07;ReadPosRankSum=2.096;VQSLOD=1.8145;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:31:3.01:0,3,47	0/0:17,2:17:3.95:0,4,46	./.	./.	1/1:32,5:28:5.93:47,6,0	0/0:32,2:15:3.48:0,3,35	./.	./.	0/0:50,1:29:8.92:0,9,70	0/1:77,6:47:99:216,0,307	0/1:35,3:25:0:0,0,0	0/0:36,3:23:12.48:0,12,201	0/1:47,4:29:36.39:36,0,103	0/0:49,9:36:8.71:0,9,65	0/0:51,5:38:2.74:0,3,23	0/1:43,5:32:15.23:15,0,34	0/1:36,3:23:15.14:70,0,15	0/1:31,1:17:44.68:45,0,97	0/1:44,2:18:22.32:22,0,223	0/0:34,9:32:6:0,6,62	0/1:204,0:100:85.11:186,0,85	1/1:42,8:40:6.01:63,6,0	0/0:36,11:34:1.25:0,1,3	0/1:65,2:28:12.12:12,0,33	1/1:28,4:25:2.37:8,2,0	0/1:41,6:25:99:190,0,167	0/1:35,2:26:40.99:41,0,60	0/1:15,4:19:12.39:75,0,12
chr10	29527059	.	CAG	C	276.40	PASS	AB=0.992;AC=13;AF=0.260;AN=50;BaseQRankSum=2.612;DP=1694;DS;FS=1.463;HRun=0;HaplotypeScore=141.9831;InbreedingCoeff=-0.1295;MQ=21.13;MQ0=323;MQRankSum=-1.986;QD=0.33;ReadPosRankSum=-5.394;VQSLOD=0.6556;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:63,0:40:0.03:0,0,0	0/1:26,0:22:29.87:32,0,30	./.	./.	0/0:45,0:35:2.50:0,2,9	0/0:37,0:17:2.50:0,2,9	./.	0/0:64,0:5:2.80:0,3,13	0/0:70,0:31:3.52:0,4,31	0/1:100,1:56:99:156,0,376	0/0:53,0:32:2.35:0,2,8	0/0:70,0:28:10.66:0,11,203	0/1:51,0:25:0.99:1,0,202	0/0:57,0:24:14.56:0,15,76	0/0:90,0:49:8.48:0,8,44	0/0:78,0:48:15.42:0,15,81	0/1:49,2:25:22.11:22,0,88	0/1:40,1:18:29.96:30,0,212	0/0:49,0:17:16.56:0,17,332	0/0:49,0:36:8.43:0,8,83	0/1:245,4:117:2.60:3,0,45	0/0:60,0:42:2.97:0,3,10	0/0:61,0:42:3.74:0,4,12	1/1:88,0:40:3.43:20,3,0	0/1:50,0:33:3.44:12,0,3	0/1:58,0:32:68.75:69,0,319	0/1:45,0:28:14.13:14,0,94	0/1:26,0:20:42.80:43,0,102
chr10	29527061	.	G	GAC	718.25	PASS	AB=0.999;AC=34;AF=0.680;AN=50;BaseQRankSum=0.509;DP=1764;DS;FS=8.977;HRun=0;HaplotypeScore=144.1062;InbreedingCoeff=-0.2130;MQ=20.95;MQ0=342;MQRankSum=1.987;QD=0.46;ReadPosRankSum=1.043;VQSLOD=1.9159;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:67,0:42:0.47:2,0,0	0/1:29,0:23:11.28:11,0,29	./.	./.	1/1:47,0:37:2.68:11,3,0	1/1:38,0:18:2.68:11,3,0	./.	0/0:71,0:5:2.88:0,3,15	1/1:60,1:31:3.01:49,3,0	0/1:104,1:59:99:248,0,259	1/1:52,1:33:2.74:12,3,0	0/0:77,0:34:10.39:0,10,130	0/1:54,0:26:18.78:19,0,136	0/1:59,0:26:3.17:20,0,3	0/1:96,0:52:1.67:2,0,28	1/1:82,0:50:8.48:59,8,0	1/1:54,0:25:2.26:55,2,0	0/1:40,0:18:14.48:14,0,176	0/1:52,0:17:68.81:69,0,112	1/1:49,0:36:2.40:11,2,0	0/1:249,0:110:22.92:23,0,27	1/1:61,1:45:2.67:11,3,0	1/1:62,0:42:2.68:11,3,0	1/1:92,0:42:3.48:38,3,0	0/1:50,0:33:2.86:6,0,3	0/1:63,0:33:73.12:116,0,73	0/1:45,0:28:33.02:33,0,42	0/1:31,0:21:17.77:18,0,60
chr10	29527073	.	C	CAT	61.13	PASS	AB=0.978;AC=9;AF=0.180;AN=50;BaseQRankSum=1.977;DP=2233;DS;FS=2.180;HRun=0;HaplotypeScore=172.0840;InbreedingCoeff=-0.0387;MQ=20.67;MQ0=475;MQRankSum=-1.636;QD=0.09;ReadPosRankSum=2.889;VQSLOD=2.6491;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:92,0:55:0.09:1,0,0	0/0:36,0:27:11.17:0,11,103	./.	./.	0/0:59,0:48:9.03:0,9,131	0/0:44,3:24:3.01:0,3,46	./.	1/1:116,0:5:2.90:16,3,0	0/0:94,0:44:6.66:0,7,64	0/0:131,0:69:89.44:0,89,1589	0/0:64,0:43:2.99:0,3,45	0/0:98,0:48:5.88:0,6,36	0/1:67,0:34:5.12:5,0,315	0/0:79,0:41:18.06:0,18,256	0/0:112,9:60:15.03:0,15,203	0/1:112,8:69:36.70:37,0,205	0/1:72,0:37:37.73:38,0,203	0/0:61,0:29:30.51:0,31,384	0/1:76,0:19:33.23:33,0,299	0/1:66,0:47:6.21:6,0,124	0/0:250,0:112:15.03:0,15,207	0/0:80,0:56:3.01:0,3,46	0/0:68,0:48:3.01:0,3,46	0/1:99,11:50:42.52:43,0,58	0/0:62,0:36:8.67:0,9,85	0/0:92,0:43:1.34:0,1,735	0/0:56,0:34:24.05:0,24,327	0/0:35,0:21:30.46:0,30,328
chr10	29527083	.	T	TAC	80.11	PASS	AB=0.998;AC=9;AF=0.173;AN=52;BaseQRankSum=2.583;DP=2656;DS;FS=11.717;HRun=0;HaplotypeScore=217.3721;InbreedingCoeff=-0.0975;MQ=20.50;MQ0=586;MQRankSum=-2.762;QD=0.09;ReadPosRankSum=-0.744;VQSLOD=1.7849;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:110,0:65:1.41:0,1,35	0/0:41,0:29:3.67:0,4,72	./.	./.	0/0:65,2:52:9.03:0,9,117	0/0:59,0:34:2.31:0,2,39	0/1:87,0:18:0:0,0,0	0/0:159,0:9:14.52:0,15,136	0/1:111,0:55:28.64:29,0,156	0/1:157,1:87:82.61:83,0,1323	0/0:68,2:48:2.20:0,2,38	1/1:119,0:59:0.25:1,0,0	0/0:89,1:54:2.28:0,2,203	0/0:106,2:63:14.77:0,15,189	0/0:143,0:72:14.68:0,15,175	0/1:138,0:73:1.31:1,0,157	0/0:87,0:45:3.34:0,3,186	0/1:85,0:43:16.10:16,0,315	0/0:96,0:22:7.45:0,7,261	0/0:76,1:52:12.51:0,13,154	0/0:243,3:112:17.49:0,17,215	0/0:95,0:66:2.64:0,3,39	0/0:69,1:47:2.58:0,3,39	0/0:135,0:65:8.35:0,8,83	0/0:79,0:50:5.93:0,6,75	0/1:107,1:45:51.77:52,0,680	0/1:65,0:35:0.13:0,0,200	0/0:43,0:24:14.46:0,14,194
chr10	29527185	.	CAT	C	309.27	PASS	AB=0.996;AC=19;AF=0.365;AN=52;BaseQRankSum=2.994;DP=2936;DS;FS=12.399;HRun=0;HaplotypeScore=288.8473;InbreedingCoeff=-0.0449;MQ=21.47;MQ0=630;MQRankSum=-2.244;QD=0.17;ReadPosRankSum=-1.689;VQSLOD=0.7436;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:145,0:93:16.18:29,0,16	0/1:42,0:14:10.46:10,0,58	./.	./.	1/1:70,0:38:5.51:34,6,0	0/0:77,0:45:3.43:0,3,26	0/1:94,0:24:0:0,0,0	1/1:124,0:6:15.83:77,16,0	0/1:124,1:69:29.22:29,0,50	0/1:165,0:77:2.61:3,0,924	1/1:55,1:35:5.89:38,6,0	0/0:142,0:84:6.44:0,6,293	0/1:114,2:61:32.69:33,0,58	0/0:135,1:80:11.11:0,11,128	0/0:183,3:98:8:0,8,121	0/1:151,0:67:28.98:29,0,76	0/0:142,0:85:23.55:0,24,632	0/1:118,3:71:81.68:82,0,508	0/0:78,0:31:42.36:0,42,403	0/1:65,0:39:4.37:4,0,80	0/1:232,0:101:18.02:18,0,167	0/0:76,1:44:14.64:0,15,93	0/0:57,0:40:25.33:0,25,192	0/0:178,4:104:24.20:0,24,327	0/1:69,0:49:11.11:45,0,11	0/1:162,0:71:3.71:4,0,913	0/1:75,0:40:28.47:28,0,214	0/0:41,0:28:27.75:0,28,529
chr10	29527187	.	TAC	T	293.16	PASS	AB=0.955;AC=13;AF=0.250;AN=52;BaseQRankSum=-0.046;DP=2880;DS;FS=2.551;HRun=0;HaplotypeScore=289.8066;InbreedingCoeff=0.2195;MQ=21.66;MQ0=611;MQRankSum=-2.071;QD=0.28;ReadPosRankSum=-0.082;VQSLOD=2.4840;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:140,0:92:18.87:0,19,87	0/1:39,0:14:2.95:5,0,3	./.	./.	0/0:66,3:39:2.66:0,3,13	0/0:70,4:46:2.92:0,3,17	0/1:89,3:24:0:0,0,0	1/1:121,5:6:10.92:162,11,0	0/1:109,12:68:42.98:43,0,55	0/1:153,2:74:52.20:52,0,536	1/1:49,4:33:2.50:9,2,0	0/0:133,1:83:18.71:0,19,178	0/1:109,5:62:13.17:13,0,100	0/0:130,1:79:21.58:0,22,164	0/0:168,9:96:19.42:0,19,120	0/0:143,3:65:12.25:0,12,59	0/0:138,0:84:42.49:0,42,562	0/1:119,1:71:35.83:36,0,261	0/0:70,0:29:10.25:0,10,244	0/0:62,1:41:9.07:0,9,50	0/0:219,0:102:14.61:0,15,99	0/0:67,4:43:5.95:0,6,51	0/0:54,3:39:8.69:0,9,75	0/0:177,1:102:18.49:0,18,361	1/1:60,6:47:4.62:46,5,0	0/1:150,4:69:66.83:67,0,516	0/0:66,5:41:15.04:0,15,133	0/0:40,1:29:20.33:0,20,283
chr10	29527201	.	CAT	C	775.32	PASS	AB=0.991;AC=24;AF=0.462;AN=52;BaseQRankSum=-1.873;DP=2340;DS;FS=51.632;HRun=0;HaplotypeScore=242.9570;InbreedingCoeff=-0.4746;MQ=21.92;MQ0=454;MQRankSum=-1.124;QD=0.41;ReadPosRankSum=-5.345;VQSLOD=-0.3738;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:106,0:77:16.48:0,16,165	0/1:26,0:8:13.99:14,0,21	./.	./.	1/1:59,0:36:5.67:36,6,0	0/0:65,1:42:3.98:0,4,24	1/1:83,0:30:12.75:94,13,0	0/1:136,0:16:33.25:33,0,133	0/1:108,0:65:53.11:53,0,57	0/1:129,0:62:58.04:58,0,616	1/1:41,0:28:3.01:34,3,0	0/1:111,0:69:66.92:67,0,127	0/1:93,0:54:28.17:59,0,28	0/0:113,1:71:22.86:0,23,140	0/1:149,1:79:21.26:31,0,21	0/1:111,0:52:11.81:56,0,12	0/1:108,1:71:52.99:53,0,483	0/1:81,1:49:48.42:48,0,232	0/1:54,0:27:17.03:17,0,199	0/1:51,2:36:28.54:29,0,47	0/1:200,3:95:27.84:28,0,82	0/1:62,0:38:16.06:16,0,41	0/1:43,2:29:9.59:10,0,26	0/0:133,1:80:4.66:0,5,364	0/1:57,1:39:12.66:78,0,13	0/1:119,3:54:59.56:60,0,549	0/1:52,0:29:55.30:55,0,124	0/0:28,0:18:5.35:0,5,297
chr10	29527959	.	AC	A	2976.89	PASS	AB=0.754;AC=19;AF=0.339;AN=56;BaseQRankSum=0.174;DP=865;FS=28.824;HRun=1;HaplotypeScore=381.6793;InbreedingCoeff=-0.4196;MQ=30.64;MQ0=37;MQRankSum=0.062;QD=5.39;ReadPosRankSum=2.605;VQSLOD=-0.7336;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:15,4:19:40.16:53,0,40	0/1:13,10:21:99:122,0,199	0/0:86,0:11:36.12:0,36,508	0/0:69,0:10:30.09:0,30,414	0/1:22,19:42:99:132,0,247	0/1:17,3:21:36.48:36,0,288	0/1:16,3:19:16.77:17,0,152	0/0:31,0:29:69.43:0,69,801	0/1:24,7:25:1.15:1,0,333	0/1:32,22:54:99:787,0,857	0/1:15,10:26:99:163,0,175	0/0:21,6:24:21.47:0,21,455	0/0:17,3:16:32.13:0,32,443	0/1:17,6:23:49.24:49,0,246	0/0:18,4:19:0.75:0,1,413	0/1:12,7:14:33.33:33,0,193	0/0:8,0:7:11.98:0,12,163	0/0:8,0:8:18.06:0,18,287	0/1:22,3:23:76.48:76,0,468	0/1:27,20:44:99:282,0,431	0/0:26,0:20:22.49:0,22,294	0/1:21,18:39:99:264,0,236	0/1:25,13:38:99:293,0,292	1/1:8,1:8:0.47:1,0,0	0/1:23,24:48:99:207,0,415	0/1:24,16:39:99:516,0,660	0/1:19,8:25:95.52:96,0,614	0/0:13,2:15:20.92:0,21,473
chr10	29527971	.	GCACACACACA	G	3806.21	PASS	AB=0.983;AC=28;AF=0.538;AN=52;BaseQRankSum=-9.996;DP=857;FS=29.162;HRun=0;HaplotypeScore=443.8873;InbreedingCoeff=-0.5785;MQ=29.35;MQ0=39;MQRankSum=0.381;QD=5.70;ReadPosRankSum=-2.104;VQSLOD=0.2206;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:14,6:20:0.63:84,0,1	0/1:22,0:20:47.29:47,0,70	./.	./.	0/1:42,0:42:8.68:56,0,9	0/1:21,0:21:34.11:299,0,34	0/1:20,0:20:33.61:118,0,34	1/1:33,0:30:0.21:2,0,0	0/1:29,0:27:33.29:231,0,33	0/1:48,0:47:86.55:87,0,631	0/1:24,0:24:20.30:112,0,20	0/1:28,0:25:21.78:366,0,22	1/1:20,0:16:3.76:126,4,0	0/0:24,0:23:8.71:0,9,43	0/1:22,0:19:0.35:311,0,0	0/1:20,0:15:43.43:124,0,43	1/1:10,1:9:7.55:198,8,0	1/1:7,2:9:3.01:90,3,0	0/1:18,0:18:47.22:62,0,47	0/1:47,0:44:36.50:167,0,37	0/1:29,0:21:55.75:56,0,122	0/1:38,0:37:47.15:47,0,52	0/1:38,0:37:7.80:179,0,8	0/0:9,0:8:2.44:0,2,6	0/1:44,0:44:75.03:358,0,75	0/1:39,0:38:99:152,0,420	0/1:27,0:25:89.24:486,0,89	0/1:15,0:15:52.27:52,0,130
chr10	29527979	.	A	AATG	6819.04	PASS	AB=0.773;AC=28;AF=0.500;AN=56;BaseQRankSum=7.729;DP=813;FS=6.149;HRun=0;HaplotypeScore=372.3262;InbreedingCoeff=-0.4647;MQ=27.31;MQ0=40;MQRankSum=-1.595;QD=10.86;ReadPosRankSum=2.071;VQSLOD=3.1476;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:15,2:17:19.65:40,0,20	1/1:11,7:20:2.96:245,3,0	0/0:79,0:7:18.04:0,18,274	0/0:71,0:10:30.06:0,30,483	0/1:19,12:38:15.37:420,0,15	0/1:7,3:23:72.30:125,0,72	0/1:12,2:20:75.67:125,0,76	0/1:20,0:24:46.01:46,0,84	0/1:29,3:29:99:148,0,132	1/1:21,12:45:9.77:1068,10,0	0/1:12,5:22:5.21:307,0,5	0/1:15,4:26:99:213,0,142	0/1:9,1:16:63.91:64,0,79	0/1:11,6:26:20.51:159,0,21	0/1:10,2:18:34.83:35,0,185	0/1:8,4:15:1.49:220,0,1	0/1:9,0:11:18.02:18,0,140	0/0:11,0:11:27.06:0,27,433	0/1:10,1:14:42.43:61,0,42	0/1:21,12:38:35.46:694,0,35	0/0:8,0:19:8.73:0,9,51	0/1:15,13:34:37.49:471,0,37	0/1:17,7:34:10.07:433,0,10	1/1:4,1:9:3.83:20,4,0	0/1:19,14:43:75.98:528,0,76	0/1:15,11:36:31.37:901,0,31	0/1:7,7:27:99:271,0,111	1/1:5,2:15:0.94:206,1,0
chr10	29527981	.	A	AATG	10867.73	PASS	AB=0.866;AC=29;AF=0.518;AN=56;BaseQRankSum=11.694;DP=820;FS=4.700;HRun=0;HaplotypeScore=359.4449;InbreedingCoeff=-0.5291;MQ=27.55;MQ0=38;MQRankSum=-0.324;QD=16.42;ReadPosRankSum=2.013;VQSLOD=3.4658;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:15,1:18:35.89:56,0,36	0/1:16,4:20:9.58:455,0,10	0/0:76,0:7:18.03:0,18,284	0/0:72,0:11:27.09:0,27,495	1/1:24,8:38:21.46:808,21,0	0/1:19,3:23:70.49:267,0,70	0/1:13,3:20:10.88:339,0,11	0/1:18,1:25:99:163,0,185	0/1:27,4:29:99:381,0,105	0/1:36,6:46:75.42:955,0,75	0/1:18,5:24:4.17:536,0,4	0/1:20,4:27:93.56:398,0,94	0/1:15,2:16:48.67:171,0,49	0/1:23,4:26:28.03:423,0,28	0/1:17,1:20:99:140,0,120	1/1:13,2:15:4.88:334,5,0	0/1:12,1:11:56.63:57,0,102	0/0:10,0:10:24.07:0,24,405	0/1:8,0:13:47.06:47,0,47	0/1:25,9:38:18.82:1117,0,19	0/1:23,0:19:16.55:17,0,78	0/1:22,6:34:21.31:841,0,21	1/1:22,8:34:1.97:849,2,0	1/1:7,1:9:5.22:36,5,0	0/1:37,6:45:84.27:965,0,84	0/1:30,5:37:96.68:817,0,97	0/1:22,2:26:99:231,0,175	0/1:10,5:15:71.21:467,0,71
chr10	29527983	.	A	AG	3892.06	PASS	AB=0.987;AC=25;AF=0.446;AN=56;BaseQRankSum=12.968;DP=834;FS=11.328;HRun=0;HaplotypeScore=377.6606;InbreedingCoeff=-0.4490;MQ=27.54;MQ0=38;MQRankSum=-2.050;QD=6.09;ReadPosRankSum=5.569;VQSLOD=2.4799;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:20,0:20:12.97:13,0,32	0/1:21,1:20:39.50:148,0,39	0/0:75,0:7:18.05:0,18,233	0/0:71,1:12:33.11:0,33,452	1/1:40,0:39:13.69:300,14,0	0/1:22,1:23:15.95:94,0,16	0/1:20,0:20:12.10:92,0,12	0/1:26,1:25:80.71:81,0,100	0/1:31,5:29:16.78:242,0,17	0/1:47,0:46:99:206,0,160	0/1:25,0:25:1.06:211,0,1	0/1:30,0:27:25.73:143,0,26	0/1:19,0:16:7.60:41,0,8	0/1:27,0:26:50.06:137,0,50	0/1:23,1:21:15.99:16,0,69	0/1:18,0:15:17.91:68,0,18	0/1:12,0:10:37.64:57,0,38	0/0:11,0:11:20.80:0,21,256	0/1:13,0:12:28.95:54,0,29	0/1:40,0:39:0.82:443,0,1	0/0:27,0:19:8.64:0,9,54	0/1:35,0:34:22.82:345,0,23	1/1:34,0:34:41.90:412,42,0	0/0:10,0:9:2.29:0,2,6	0/1:45,0:45:18.35:372,0,18	0/1:38,0:37:95.09:192,0,95	0/1:28,0:26:31.05:31,0,97	0/1:15,0:15:54.26:195,0,54
chr10	29527984	.	C	CA	2661.70	PASS	AB=0.987;AC=29;AF=0.518;AN=56;BaseQRankSum=10.566;DP=833;FS=0.624;HRun=1;HaplotypeScore=390.9675;InbreedingCoeff=-0.3859;MQ=27.79;MQ0=37;MQRankSum=0.545;QD=4.09;ReadPosRankSum=4.473;VQSLOD=-0.2798;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:20,0:20:13.35:18,0,13	0/1:22,0:20:26.10:92,0,26	0/0:71,0:7:18.06:0,18,228	0/0:73,0:13:33.11:0,33,418	1/1:39,0:38:22.65:218,23,0	0/1:23,0:23:15.44:47,0,15	1/1:20,0:20:1.09:119,1,0	0/1:26,1:25:99:229,0,179	0/1:35,1:29:13.62:95,0,14	0/1:47,0:46:99:169,0,519	0/1:26,0:26:11.28:174,0,11	0/1:29,1:27:17.70:124,0,18	0/1:20,1:17:13.86:154,0,14	0/1:26,1:26:13.15:243,0,13	0/1:24,0:21:20.03:67,0,20	1/1:18,0:15:0.13:139,0,0	0/1:12,0:10:2.24:2,0,98	0/0:11,0:11:20.71:0,21,225	0/1:12,1:12:38.88:39,0,60	0/1:40,0:39:9.68:177,0,10	0/0:28,0:20:16.80:0,17,170	0/1:34,0:33:21.86:70,0,22	1/1:35,0:34:11.36:200,11,0	1/1:10,0:9:5.35:30,5,0	0/1:45,0:45:75:164,0,75	0/1:38,0:37:99:212,0,420	0/1:28,0:26:32.05:32,0,168	0/1:15,0:15:10.44:10,0,206
chr10	29527985	.	AC	A	3026.09	PASS	AB=0.929;AC=33;AF=0.589;AN=56;BaseQRankSum=7.691;DP=822;FS=7.756;HRun=1;HaplotypeScore=374.8549;InbreedingCoeff=0.0170;MQ=27.79;MQ0=37;MQRankSum=-0.944;QD=4.81;ReadPosRankSum=9.241;VQSLOD=-0.5907;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:20,0:20:3.90:21,0,4	0/1:21,1:20:19.18:98,0,19	0/0:69,0:7:18.06:0,18,228	0/0:73,0:14:33.10:0,33,418	1/1:34,3:36:23.92:202,24,0	1/1:21,1:22:16.11:93,16,0	1/1:17,2:19:13.25:138,13,0	0/1:18,7:23:99:220,0,179	0/1:34,2:29:32.01:97,0,32	0/1:44,3:46:99:175,0,460	1/1:23,3:26:10.59:198,11,0	1/1:27,3:27:23.64:189,24,0	0/1:17,3:16:2.83:158,0,3	0/1:21,5:25:16:233,0,16	1/1:22,3:22:4.05:99,4,0	1/1:15,3:15:13.91:166,14,0	0/0:12,0:10:9.08:0,9,116	0/0:11,0:11:23.24:0,23,284	0/1:12,0:11:34.27:39,0,34	1/1:36,3:38:8.96:202,9,0	0/0:28,0:20:9.59:0,10,173	0/1:33,1:33:15.04:77,0,15	1/1:33,2:34:31.82:241,32,0	1/1:9,1:9:5.35:30,5,0	0/1:42,3:45:17.57:206,0,18	0/1:32,6:37:99:224,0,389	0/1:27,1:26:81.18:81,0,116	0/1:15,0:15:16.83:17,0,199
chr10	29527988	.	C	CA	2483.11	PASS	AB=0.962;AC=33;AF=0.589;AN=56;BaseQRankSum=6.183;DP=814;FS=5.077;HRun=1;HaplotypeScore=408.0721;InbreedingCoeff=-0.0852;MQ=28.56;MQ0=32;MQRankSum=0.296;QD=3.77;ReadPosRankSum=1.301;VQSLOD=-0.5068;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:19,1:20:16.62:17,0,27	0/1:18,2:18:21.21:62,0,21	0/0:65,0:7:15.05:0,15,190	0/0:69,0:14:33.11:0,33,418	1/1:34,3:36:19.61:186,20,0	0/1:22,0:22:6.88:26,0,7	1/1:21,0:21:7.34:77,7,0	0/1:24,0:21:17.20:17,0,188	0/1:36,2:31:21.51:22,0,109	0/1:47,2:48:99:579,0,183	1/1:26,1:27:31.54:200,32,0	0/1:28,2:27:18.37:23,0,18	0/1:20,1:17:28.97:29,0,37	0/1:22,2:23:0.54:1,0,45	0/1:25,0:22:7.81:27,0,8	1/1:16,2:15:0.17:37,0,0	0/0:11,0:10:14.27:0,14,153	0/0:11,0:11:26.72:0,27,299	0/1:12,0:10:15.87:74,0,16	1/1:34,4:37:35.92:273,36,0	0/1:30,0:22:8.04:8,0,112	1/1:29,4:33:33.30:163,33,0	1/1:31,3:33:25.20:196,25,0	1/1:10,0:9:5.52:27,6,0	1/1:39,6:45:24.67:178,25,0	0/1:38,0:37:99:323,0,154	0/1:26,1:25:98.98:99,0,100	0/1:13,2:15:15.72:16,0,202
chr10	29527989	.	AC	A	1915.51	PASS	AB=0.946;AC=30;AF=0.536;AN=56;BaseQRankSum=9.779;DP=798;FS=1.070;HRun=1;HaplotypeScore=363.8551;InbreedingCoeff=-0.0679;MQ=28.86;MQ0=30;MQRankSum=-1.699;QD=3.12;ReadPosRankSum=2.441;VQSLOD=-0.7295;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:20,0:20:8.91:20,0,9	0/1:16,2:17:40.35:62,0,40	0/0:62,0:6:15.05:0,15,190	0/0:66,0:14:33.10:0,33,417	1/1:29,5:35:15.07:169,15,0	1/1:20,2:22:5.13:57,5,0	0/1:19,1:21:0.29:22,0,0	0/1:24,0:22:30.01:30,0,238	0/1:36,0:30:48.02:48,0,80	0/1:34,7:44:99:337,0,220	1/1:17,4:26:20.53:148,21,0	0/1:25,1:28:38.27:38,0,39	0/1:16,0:16:3.43:3,0,45	0/1:25,1:25:9.29:9,0,41	0/1:19,2:22:0.46:35,0,0	1/1:14,2:15:5.55:51,6,0	0/0:12,0:11:9.09:0,9,147	0/0:12,0:12:23.22:0,23,285	0/1:10,0:11:9.82:10,0,39	1/1:33,6:38:31.22:255,31,0	0/0:28,0:24:19.94:0,20,198	1/1:23,5:31:37.06:178,37,0	0/1:27,4:32:0.03:167,0,0	1/1:6,0:8:2.97:20,3,0	0/1:35,6:44:13.02:110,0,13	0/1:26,4:33:99:210,0,179	0/1:19,3:23:64.20:64,0,98	0/1:15,0:15:38.64:39,0,195
chr10	29527990	.	C	CAAT	5213.47	PASS	AB=0.991;AC=28;AF=0.500;AN=56;BaseQRankSum=15.203;DP=799;FS=1.832;HRun=0;HaplotypeScore=387.5858;InbreedingCoeff=-0.5310;MQ=29.14;MQ0=30;MQRankSum=-3.647;QD=7.91;ReadPosRankSum=2.062;VQSLOD=2.5539;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:21,0:21:38.98:48,0,39	0/1:19,0:17:76:176,0,76	0/0:61,0:6:15.05:0,15,258	0/0:67,0:15:33.06:0,33,511	1/1:36,0:35:19.46:450,19,0	0/1:22,0:22:99:107,0,119	0/1:22,0:22:5.27:132,0,5	0/1:26,0:23:15.72:16,0,232	0/1:36,0:29:99:163,0,178	0/1:42,0:42:99:394,0,312	0/1:27,0:27:20.04:327,0,20	0/1:30,0:28:99:260,0,148	0/1:20,0:16:43.50:133,0,43	0/1:25,1:25:14.92:178,0,15	0/1:26,0:23:31.54:32,0,140	0/1:17,1:15:20.27:154,0,20	0/1:12,0:11:15.12:15,0,217	0/0:12,0:12:24.07:0,24,385	0/1:12,0:10:34.29:34,0,53	0/1:40,0:39:10.05:621,0,10	0/1:32,0:24:1.30:1,0,172	1/1:30,0:30:14.44:390,14,0	0/1:34,0:33:61.53:435,0,62	1/1:9,0:8:5.93:53,6,0	0/1:44,0:44:99:360,0,135	0/1:31,2:32:99:364,0,233	0/1:25,0:23:99:99,0,313	0/1:15,0:15:99:274,0,294
chr10	29527991	.	AC	A	4803.54	PASS	AB=0.892;AC=27;AF=0.482;AN=56;BaseQRankSum=16.197;DP=793;FS=9.871;HRun=1;HaplotypeScore=348.8543;InbreedingCoeff=-0.3554;MQ=29.60;MQ0=28;MQRankSum=-4.255;QD=7.86;ReadPosRankSum=5.692;VQSLOD=1.4739;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:20,1:21:28.31:30,0,28	0/1:14,4:17:56.59:190,0,57	0/0:61,0:6:15.05:0,15,190	0/0:66,0:16:39.11:0,39,469	1/1:26,8:34:32.39:376,32,0	0/1:17,3:22:43.45:132,0,43	0/1:19,3:22:59.43:114,0,59	0/1:23,0:21:49.88:50,0,302	0/1:33,4:30:85.29:181,0,85	0/1:39,5:43:99:398,0,526	0/1:22,5:27:49.65:294,0,50	0/1:28,3:29:90.84:179,0,91	0/1:18,1:15:63.88:64,0,80	0/1:22,2:24:0.49:207,0,0	0/1:24,1:23:45.85:46,0,73	1/1:16,1:14:16.07:181,16,0	0/1:11,1:11:19.53:20,0,141	0/0:12,0:12:23.25:0,23,298	0/0:11,0:10:13.22:0,13,165	0/1:29,10:40:37.92:511,0,38	0/0:30,0:24:20.75:0,21,231	1/1:23,6:30:34.62:389,35,0	0/1:26,8:33:27.20:350,0,27	1/1:8,1:8:3.01:36,3,0	0/1:38,6:44:99:353,0,108	0/1:30,3:32:99:358,0,289	0/1:22,2:22:99:111,0,168	0/1:10,5:15:99:236,0,201
chr10	29527992	.	C	CT	2874.95	PASS	AB=0.957;AC=25;AF=0.446;AN=56;BaseQRankSum=14.840;DP=784;FS=6.894;HRun=0;HaplotypeScore=361.4946;InbreedingCoeff=-0.5172;MQ=30.02;MQ0=26;MQRankSum=-4.873;QD=4.72;ReadPosRankSum=4.611;VQSLOD=2.3203;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:21,1:22:28.30:28,0,51	0/1:18,1:17:84.17:100,0,84	0/0:56,1:5:15.05:0,15,207	0/0:63,0:16:32.99:0,33,446	1/1:30,3:32:6.83:270,7,0	0/1:22,0:22:59.64:60,0,114	0/1:19,2:21:83.41:83,0,101	0/1:21,0:19:17.46:17,0,319	0/1:32,3:28:90.94:91,0,139	0/1:43,3:45:99:225,0,633	0/1:27,0:27:91.50:218,0,92	0/1:30,3:30:99:125,0,174	0/1:18,1:15:82.68:83,0,106	0/1:25,0:24:9.19:140,0,9	0/1:23,3:23:12.21:12,0,154	0/1:18,0:15:23.56:87,0,24	0/1:12,0:11:2.88:3,0,184	0/0:12,0:12:26.82:0,27,337	0/0:12,0:10:14.38:0,14,200	0/1:35,4:39:99:350,0,111	0/0:30,1:24:1.02:0,1,229	0/1:28,2:30:1.02:204,0,1	0/1:32,2:33:76.87:274,0,77	1/1:10,0:9:3.46:24,3,0	0/1:43,1:44:99:180,0,220	0/1:32,1:32:99:243,0,349	0/1:22,2:22:56.36:56,0,292	0/1:15,0:15:99:155,0,234
chr10	29527999	.	A	AATG	3103.76	PASS	AB=0.960;AC=23;AF=0.411;AN=56;BaseQRankSum=11.742;DP=729;FS=29.487;HRun=0;HaplotypeScore=351.9362;InbreedingCoeff=-0.4704;MQ=34.58;MQ0=23;MQRankSum=-6.726;QD=5.68;ReadPosRankSum=-1.302;VQSLOD=1.3133;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:22:40.72:41,0,172	0/1:18,2:18:99:137,0,253	0/0:42,0:7:15.04:0,15,241	0/0:49,0:18:45.12:0,45,759	1/1:28,2:29:2.79:271,3,0	0/1:18,0:18:1.29:1,0,277	0/1:19,0:19:59.78:60,0,170	0/1:22,0:19:37.01:37,0,520	0/1:32,0:25:21.26:21,0,328	0/1:43,4:47:99:480,0,1181	0/1:20,3:25:99:324,0,148	0/1:31,0:28:99:110,0,392	0/1:19,0:15:93.30:93,0,293	0/1:24,1:24:12.89:172,0,13	0/0:25,0:22:0.30:0,0,304	0/1:16,0:13:72.21:82,0,72	0/0:12,0:11:13.74:0,14,376	0/0:11,0:11:30.09:0,30,522	0/0:14,0:12:29.17:0,29,521	0/1:32,3:35:99:232,0,237	0/0:30,0:23:23.86:0,24,419	0/1:26,4:30:73.06:267,0,73	0/1:29,2:30:99:218,0,143	1/1:11,0:10:2.60:10,3,0	0/1:39,2:41:99:284,0,489	0/1:31,2:32:99:255,0,713	0/1:22,2:22:99:133,0,497	0/1:14,0:14:33.07:33,0,308
chr10	29528001	.	A	AG	195.30	PASS	AB=0.956;AC=9;AF=0.161;AN=56;BaseQRankSum=9.852;DP=727;FS=5.345;HRun=0;HaplotypeScore=338.4784;InbreedingCoeff=0.0162;MQ=35.34;MQ0=21;MQRankSum=-6.039;QD=0.85;ReadPosRankSum=-1.664;VQSLOD=1.4062;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:4.02:0,4,128	0/0:20,1:19:7.67:0,8,191	0/0:39,0:7:15.93:0,16,192	0/0:44,0:17:51.07:0,51,641	0/1:26,2:27:4.48:4,0,70	0/0:17,0:18:28.88:0,29,237	0/0:17,2:19:19.85:0,20,160	0/0:24,0:21:7.07:0,7,474	0/0:31,2:26:23.70:0,24,311	0/1:47,4:50:99:133,0,809	0/1:26,0:26:57.26:57,0,147	0/0:29,2:28:14.51:0,15,297	0/0:18,1:15:26.57:0,27,287	0/0:24,0:25:14.51:0,15,127	0/0:22,3:22:29.67:0,30,264	0/0:14,0:12:16.10:0,16,88	0/0:13,0:12:26.69:0,27,297	0/0:11,0:11:29.79:0,30,360	0/0:15,0:13:18.09:0,18,376	0/0:33,3:37:25.26:0,25,310	0/0:29,1:23:24.04:0,24,297	0/1:27,2:30:1.47:1,0,143	0/1:28,0:27:1.19:1,0,139	1/1:11,0:10:2.74:12,3,0	0/0:40,2:42:8.05:0,8,383	0/1:30,1:32:97.54:98,0,512	0/1:22,2:22:2.31:2,0,335	0/0:13,0:13:23.68:0,24,163
chr10	29528005	.	AC	A	2257.43	PASS	AB=0.832;AC=25;AF=0.446;AN=56;BaseQRankSum=14.487;DP=671;FS=121.642;HRun=1;HaplotypeScore=296.5829;InbreedingCoeff=-0.4427;MQ=40.90;MQ0=16;MQRankSum=-9.733;QD=4.24;ReadPosRankSum=0.252;VQSLOD=0.5200;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,1:21:3.65:0,4,139	0/1:14,5:17:99:159,0,131	0/0:33,0:11:33.09:0,33,395	0/0:34,0:17:51.16:0,51,640	1/1:17,10:26:6.50:88,7,0	0/1:16,4:20:99:107,0,116	0/1:14,4:18:54.31:54,0,124	0/1:24,0:21:16.34:16,0,622	0/1:25,5:23:99:113,0,179	0/1:39,8:46:99:257,0,773	0/1:18,8:26:99:122,0,105	0/1:25,4:26:65.20:65,0,231	0/1:13,4:13:37.90:38,0,183	0/1:14,7:20:80.63:144,0,81	0/1:23,2:22:27.84:28,0,156	0/1:12,4:13:5.73:86,0,6	0/1:10,1:10:16.36:16,0,210	0/0:9,0:9:17.31:0,17,225	0/0:14,0:12:15.39:0,15,347	0/1:26,12:38:90.90:91,0,296	0/0:27,0:20:20.90:0,21,250	0/1:21,7:28:94.99:139,0,95	0/1:17,9:26:41.32:130,0,41	1/1:10,1:10:3.01:38,3,0	0/1:32,9:41:99:236,0,256	0/1:23,7:29:99:255,0,466	0/1:18,3:19:43.28:43,0,185	1/1:3,5:8:3.61:192,4,0
chr10	29529124	.	GATATATATATATATATATATATATAT	G	704.81	PASS	AB=0.889;AC=10;AF=0.417;AN=24;BaseQRankSum=1.733;DP=215;FS=8.193;HRun=0;HaplotypeScore=133.3999;InbreedingCoeff=0.1638;MQ=89.16;MQ0=2;MQRankSum=0.222;QD=11.19;ReadPosRankSum=-2.088;VQSLOD=1.4407;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:17,0:12:0:0,0,0	0/0:16,0:8:1.55:0,2,4	0/1:6,1:7:29.09:98,0,29	./.	./.	0/1:25,3:28:27.48:88,0,27	./.	1/1:12,0:12:3:29,3,0	./.	1/1:2,0:3:3.01:181,3,0	./.	./.	1/1:1,1:2:3.01:201,3,0	1/1:8,3:11:3.01:201,3,0	0/0:12,0:13:15.05:0,15,954	0/0:5,0:5:3:0,3,25	0/0:1,0:1:0.47:0,0,1	./.	./.	./.	./.	./.	0/0:6,0:6:3.01:0,3,32	./.	./.	./.
chr10	29530574	.	TG	T	6834.20	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=0.563;DP=490;FS=1.314;HRun=2;HaplotypeScore=97.7278;InbreedingCoeff=0.7309;MQ=47.00;MQ0=76;MQRankSum=-2.957;QD=15.09;ReadPosRankSum=1.365;VQSLOD=4.7819;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,21:19:29.57:324,30,0	1/1:9,0:6:5.50:36,5,0	0/0:21,0:7:17.94:0,18,176	0/0:16,0:6:4.47:0,4,87	1/1:14,2:13:24.99:161,25,0	1/1:12,6:12:21.01:205,21,0	1/1:9,13:14:30.94:349,31,0	1/1:18,0:15:38.33:405,38,0	1/1:4,13:11:27.06:286,27,0	1/1:19,11:21:53.03:517,53,0	1/1:6,3:7:15.01:147,15,0	1/1:18,4:16:28.26:275,28,0	1/1:11,7:16:28.54:251,29,0	1/1:9,3:11:15.41:107,15,0	1/1:16,4:10:16.75:124,17,0	1/1:12,7:14:31.87:314,32,0	1/1:9,12:16:40.30:412,40,0	1/1:10,6:12:30.03:304,30,0	1/1:13,7:14:39.02:392,39,0	1/1:15,2:14:29.86:275,30,0	1/1:17,17:21:44.43:496,44,0	1/1:12,3:12:34.83:293,35,0	1/1:4,4:8:17.30:165,17,0	1/1:10,6:11:4.60:45,5,0	1/1:10,3:6:14.39:138,14,0	1/1:6,11:15:40.62:445,41,0	1/1:13,6:16:34.89:322,35,0	1/1:1,1:2:5.50:47,6,0
chr10	29530575	.	G	GT	9764.38	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-0.246;DP=515;FS=0.000;HRun=3;HaplotypeScore=101.5850;InbreedingCoeff=0.7514;MQ=46.37;MQ0=76;MQRankSum=-2.816;QD=20.51;ReadPosRankSum=1.617;VQSLOD=4.3336;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:26,2:21:26.71:277,27,0	1/1:2,7:6:6.02:95,6,0	0/0:22,0:7:17.94:0,18,176	0/0:17,0:6:4.47:0,4,87	1/1:7,7:14:27.07:342,27,0	1/1:10,10:14:21.50:299,22,0	1/1:18,5:15:33.20:423,33,0	1/1:5,18:19:48.33:592,48,0	1/1:15,2:11:26.61:191,27,0	1/1:17,13:21:60.61:808,61,0	1/1:3,5:6:15.05:228,15,0	1/1:8,13:16:27.55:376,28,0	1/1:14,5:17:30.54:386,31,0	1/1:5,5:11:18.03:216,18,0	1/1:9,11:10:18.06:286,18,0	1/1:11,8:14:32.70:409,33,0	1/1:15,6:17:48.13:601,48,0	1/1:11,5:13:36.55:468,37,0	1/1:8,12:14:39.13:573,39,0	1/1:9,10:16:29.67:389,30,0	1/1:23,12:22:44.74:610,45,0	1/1:6,10:13:36.01:508,36,0	1/1:5,3:8:18.06:240,18,0	1/1:9,7:11:5.22:84,5,0	1/1:5,8:7:18.03:218,18,0	1/1:14,3:16:42.34:501,42,0	1/1:13,9:17:39.13:558,39,0	1/1:1,1:2:6.02:86,6,0
chr10	29530606	.	GTGTGTGC	G	4059.87	PASS	AB=1.000;AC=28;AF=0.500;AN=56;BaseQRankSum=-11.027;DP=516;FS=1.960;HRun=0;HaplotypeScore=153.0929;InbreedingCoeff=-0.7288;MQ=51.04;MQ0=40;MQRankSum=4.761;QD=8.02;ReadPosRankSum=-3.570;VQSLOD=1.8568;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:17,9:23:42.14:722,42,0	0/0:5,0:3:6.02:0,6,86	0/1:38,0:12:3.08:3,0,338	0/1:35,0:16:65.19:65,0,256	0/1:21,0:18:99:126,0,290	0/1:18,0:16:99:146,0,184	0/1:18,0:14:64.85:65,0,117	0/1:16,0:14:99:166,0,289	1/1:13,6:17:48.08:855,48,0	0/1:30,0:23:99:154,0,500	0/1:8,0:7:64.57:65,0,126	0/1:23,0:22:46.68:47,0,295	0/1:21,0:20:99:235,0,293	0/1:13,0:12:61.58:62,0,163	0/1:18,0:14:99:172,0,214	0/1:18,0:16:87.96:88,0,241	0/1:17,0:14:99:106,0,103	0/1:16,0:13:92.25:92,0,251	0/1:17,0:17:99:163,0,284	0/1:20,0:19:89.40:89,0,231	0/1:23,0:15:99:100,0,182	0/1:17,0:14:84.90:85,0,339	0/1:9,0:9:99:102,0,123	0/1:15,0:13:26.09:75,0,26	0/1:14,0:11:84.94:85,0,154	0/1:17,0:12:88.21:88,0,250	0/1:19,0:15:99:106,0,273	0/0:5,0:2:3.01:0,3,50
chr10	29530612	.	GC	G	10169.25	PASS	AB=0.935;AC=54;AF=0.964;AN=56;BaseQRankSum=-2.202;DP=463;FS=13.127;HRun=1;HaplotypeScore=88.5631;InbreedingCoeff=-0.0055;MQ=56.20;MQ0=29;MQRankSum=-0.808;QD=21.96;ReadPosRankSum=2.102;VQSLOD=3.7583;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,14:23:45.12:550,45,0	1/1:1,2:2:5.61:51,6,0	0/1:35,3:14:77.04:77,0,333	0/1:31,2:16:62.29:62,0,266	1/1:4,14:16:35.68:419,36,0	1/1:3,12:14:30.10:410,30,0	1/1:3,12:14:21.99:264,22,0	1/1:3,5:6:18.06:247,18,0	1/1:7,12:18:48.14:594,48,0	1/1:4,20:19:53.76:701,54,0	1/1:0,6:6:18.06:249,18,0	1/1:2,22:23:36.12:493,36,0	1/1:2,19:20:53.76:694,54,0	1/1:1,9:9:15.04:189,15,0	1/1:3,16:17:44.32:556,44,0	1/1:1,15:15:36.11:480,36,0	1/1:1,9:9:24.03:293,24,0	1/1:0,12:11:27.09:366,27,0	1/1:1,15:16:42.14:581,42,0	1/1:0,18:17:39.13:536,39,0	1/1:4,14:13:23.12:244,23,0	1/1:1,14:13:35.66:461,36,0	1/1:1,6:7:20.66:255,21,0	1/1:2,11:12:8.59:102,9,0	1/1:1,11:12:30.09:396,30,0	1/1:1,12:10:30.09:399,30,0	1/1:2,15:15:38.69:489,39,0	1/1:1,4:2:2.60:10,3,0
chr10	29530613	.	CT	C	4542.58	PASS	AB=0.971;AC=51;AF=0.944;AN=54;BaseQRankSum=1.528;DP=443;FS=11.194;HRun=1;HaplotypeScore=102.0184;InbreedingCoeff=0.3208;MQ=57.66;MQ0=29;MQRankSum=-1.323;QD=11.36;ReadPosRankSum=4.170;VQSLOD=2.1331;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:25,1:23:43.10:265,43,0	1/1:3,0:1:2.99:24,3,0	0/0:39,0:15:0.22:0,0,352	0/1:32,1:16:7.04:7,0,235	1/1:16,1:15:6.34:165,6,0	1/1:14,0:12:29.44:193,29,0	1/1:16,1:13:18.03:113,18,0	1/1:8,0:6:17.04:96,17,0	1/1:20,0:19:24.50:248,25,0	1/1:22,1:17:49.83:368,50,0	1/1:6,0:6:17.78:128,18,0	1/1:22,1:22:35.63:257,36,0	1/1:21,0:20:28.70:312,29,0	1/1:9,0:8:11.69:70,12,0	1/1:17,0:14:38.13:242,38,0	1/1:16,0:15:33.98:225,34,0	1/1:9,0:8:18.91:120,19,0	1/1:12,0:11:26.37:167,26,0	1/1:15,0:15:41.02:263,41,0	1/1:19,0:18:17.49:244,17,0	1/1:17,0:11:16.48:97,16,0	1/1:15,0:13:10.54:209,11,0	1/1:6,0:6:17.78:129,18,0	1/1:12,0:10:5.47:38,5,0	1/1:13,0:11:26.23:158,26,0	1/1:13,0:10:27.40:175,27,0	1/1:16,0:13:32.65:230,33,0	./.
chr10	29532425	.	GGTTTTT	G	821.65	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.777;DP=527;FS=0.000;HRun=0;HaplotypeScore=108.8492;InbreedingCoeff=0.9885;MQ=81.39;MQ0=2;MQRankSum=-5.912;QD=63.20;ReadPosRankSum=-0.583;VQSLOD=3.9073;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:90.29:0,90,3086	0/0:6,0:6:18.05:0,18,552	0/0:25,0:21:62.93:0,63,1739	0/0:12,0:12:30.07:0,30,850	0/0:20,0:20:60.21:0,60,2222	0/0:23,0:23:69.24:0,69,2542	0/0:17,0:17:51.16:0,51,1764	0/0:39,0:39:99:0,117,4091	1/1:0,13:13:36.12:916,36,0	0/0:20,0:20:60.20:0,60,2101	0/0:17,0:17:51.18:0,51,1891	0/0:16,0:16:48.15:0,48,1673	0/0:21,0:21:63.20:0,63,2280	0/0:21,0:21:63.20:0,63,2273	0/0:15,0:15:45.15:0,45,1693	0/0:10,0:10:30.10:0,30,1128	0/0:30,0:30:90.31:0,90,3177	0/0:15,0:15:45.09:0,45,1512	0/0:23,0:23:69.21:0,69,2208	0/0:8,0:8:24.08:0,24,849	0/0:23,0:23:69.24:0,69,2543	0/0:12,0:12:36.12:0,36,1351	0/0:20,0:20:60.21:0,60,2105	0/0:25,0:25:75.26:0,75,2783	0/0:19,0:19:57.20:0,57,2035	0/0:19,0:19:57.20:0,57,2115	0/0:16,0:16:48.14:0,48,1699	0/0:11,0:11:33.11:0,33,1223
chr10	29532824	.	C	CT	232.18	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=1.742;DP=429;FS=0.000;HRun=7;HaplotypeScore=44.3302;InbreedingCoeff=0.7403;MQ=66.79;MQ0=0;MQRankSum=-2.340;QD=21.11;ReadPosRankSum=0.452;VQSLOD=2.7384;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:34:93.13:0,93,892	0/0:10,0:10:24.03:0,24,232	0/0:10,0:10:18.02:0,18,173	0/0:6,0:7:11.92:0,12,94	0/0:12,0:12:27.04:0,27,261	0/0:14,0:14:33.05:0,33,318	0/0:17,0:17:45.07:0,45,435	0/0:27,0:27:78.08:0,78,731	1/1:3,8:11:27.08:326,27,0	0/0:16,0:16:45.07:0,45,434	0/0:17,0:17:48.08:0,48,463	0/0:24,0:24:66.10:0,66,637	0/0:21,0:21:51.06:0,51,487	0/0:18,0:18:45.07:0,45,434	0/0:24,0:24:69.11:0,69,666	0/0:18,0:18:51.08:0,51,492	0/0:27,0:27:72.10:0,72,690	0/0:16,0:16:45.07:0,45,435	0/0:22,0:22:51.06:0,51,486	0/0:5,0:5:12.02:0,12,116	0/0:9,0:9:21:0,21,190	0/0:1,0:1:3:0,3,29	0/0:6,0:6:12.01:0,12,116	0/0:15,0:15:36.05:0,36,348	0/0:10,0:10:30.05:0,30,290	0/0:19,0:19:45.06:0,45,435	0/0:16,0:16:45.07:0,45,434	0/0:3,0:3:9.01:0,9,87
chr10	29532855	.	T	TG	304.02	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.960;DP=398;FS=0.000;HRun=7;HaplotypeScore=43.8138;InbreedingCoeff=0.6518;MQ=66.42;MQ0=0;MQRankSum=-3.272;QD=25.33;ReadPosRankSum=0.443;VQSLOD=3.7619;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:84.10:0,84,809	0/0:2,0:2:6.01:0,6,58	0/0:10,0:10:15.45:0,15,145	0/0:9,0:9:9.64:0,10,158	0/0:10,0:10:27.04:0,27,261	0/0:12,0:12:24.03:0,24,231	0/0:18,0:18:45.06:0,45,434	0/0:20,0:20:42.05:0,42,400	1/1:1,11:12:33.10:398,33,0	0/0:11,0:11:21.01:0,21,197	0/0:8,0:8:15.01:0,15,145	0/0:27,0:27:75.11:0,75,718	0/0:18,0:18:39.05:0,39,376	0/0:13,0:13:30.04:0,30,289	0/0:26,0:26:66.05:0,66,627	0/0:19,0:19:51.08:0,51,492	0/0:31,0:31:72.11:0,72,695	0/0:17,0:17:33.04:0,33,319	0/0:20,0:20:54.07:0,54,517	0/0:7,0:7:18.02:0,18,172	0/0:11,0:11:33.05:0,33,318	0/0:2,0:2:6.01:0,6,58	0/0:4,0:4:12.02:0,12,116	0/0:12,0:12:30.04:0,30,289	0/0:13,0:13:39.06:0,39,376	0/0:14,0:14:30.04:0,30,289	0/0:15,0:15:45.03:0,45,418	0/0:1,0:1:3:0,3,29
chr10	29533714	.	T	TA	2585.63	PASS	AB=0.802;AC=43;AF=0.768;AN=56;BaseQRankSum=-2.714;DP=367;FS=16.827;HRun=13;HaplotypeScore=40.7796;InbreedingCoeff=0.2382;MQ=49.59;MQ0=28;MQRankSum=-0.424;QD=8.23;ReadPosRankSum=-0.239;VQSLOD=0.5301;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:25:19.57:0,20,227	1/1:2,3:5:8.85:70,9,0	0/0:3,0:3:5.90:0,6,40	0/1:6,0:3:8.59:9,0,13	1/1:14,4:18:14.97:131,15,0	1/1:5,9:12:21.02:195,21,0	1/1:7,7:11:26.94:234,27,0	1/1:10,5:12:12.01:112,12,0	0/1:12,0:11:13.70:20,0,14	0/1:9,5:14:2.57:117,0,3	1/1:6,11:15:17.89:155,18,0	1/1:2,7:8:3:28,3,0	0/1:3,2:4:14.58:22,0,15	1/1:3,3:5:6.01:56,6,0	1/1:3,5:7:6.01:56,6,0	0/1:4,4:7:8.57:72,0,9	0/0:22,2:22:7.77:0,8,198	0/1:15,4:16:23.58:24,0,137	1/1:9,5:19:8.78:169,9,0	1/1:1,13:16:21:191,21,0	1/1:3,7:9:9.48:85,9,0	0/1:4,4:7:0:0,0,0	1/1:6,9:17:0.04:109,0,0	1/1:1,6:6:6.01:56,6,0	1/1:6,12:16:29.86:262,30,0	1/1:4,7:10:11.95:102,12,0	1/1:6,10:19:5.49:162,5,0	1/1:4,11:14:33.04:306,33,0
chr10	29534620	.	G	GA	9023.49	PASS	AB=0.656;AC=42;AF=0.750;AN=56;BaseQRankSum=-0.176;DP=579;FS=6.206;HRun=11;HaplotypeScore=97.9096;InbreedingCoeff=0.5632;MQ=73.51;MQ0=1;MQRankSum=0.305;QD=18.96;ReadPosRankSum=-0.114;VQSLOD=5.1046;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:23:64.75:0,65,487	1/1:1,6:7:18.04:182,18,0	0/0:24,0:19:3.60:0,4,58	0/0:10,0:7:6.91:0,7,26	1/1:8,26:36:33.60:649,34,0	1/1:5,18:22:7.64:439,8,0	1/1:3,20:23:48.10:487,48,0	1/1:7,16:23:45.07:449,45,0	0/0:22,1:23:28.35:0,28,393	1/1:7,18:26:36.76:533,37,0	0/1:11,20:31:6.65:459,0,7	1/1:10,15:25:17.60:511,18,0	1/1:6,12:18:9.83:281,10,0	1/1:3,15:18:12.85:312,13,0	1/1:3,19:23:56.95:562,57,0	0/1:3,15:18:7.39:296,0,7	0/0:21,0:22:49.81:0,50,373	0/1:11,2:13:27.99:28,0,176	1/1:5,12:18:44.85:408,45,0	1/1:7,18:26:16.14:428,16,0	1/1:3,4:7:12.02:122,12,0	1/1:2,22:24:61.29:590,61,0	0/1:8,15:23:6.54:286,0,7	1/1:2,13:15:42.08:424,42,0	1/1:7,14:21:23.03:389,23,0	1/1:10,9:21:38.30:333,38,0	1/1:5,28:33:77.94:762,78,0	1/1:0,3:3:9.02:91,9,0
chr10	29534983	.	CCCGAAGGCCGAAGG	C	1995.16	PASS	AB=0.926;AC=4;AF=0.071;AN=56;BaseQRankSum=5.186;DP=582;FS=4.564;HRun=0;HaplotypeScore=229.2447;InbreedingCoeff=0.4218;MQ=76.97;MQ0=0;MQRankSum=-5.389;QD=34.40;ReadPosRankSum=2.694;VQSLOD=2.9777;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,105,6614	0/0:13,0:13:33.11:0,33,2092	0/0:10,0:10:18.04:0,18,727	0/1:17,2:19:99:200,0,1392	0/0:35,0:35:93.32:0,93,5964	0/0:19,0:19:54.19:0,54,3644	0/0:18,0:18:42.14:0,42,2544	0/0:13,0:13:33.02:0,33,1776	1/1:6,15:21:45.15:1836,45,0	0/0:28,0:28:66.23:0,66,4118	0/0:23,0:23:57.20:0,57,3886	0/0:20,0:20:4.26:0,4,3193	0/0:13,0:13:36.12:0,36,2253	0/0:18,0:18:42.14:0,42,2641	0/0:18,0:18:39.12:0,39,2233	0/1:17,1:18:74.29:74,0,2650	0/0:32,0:32:72.23:0,72,2550	0/0:29,0:29:75.26:0,75,2753	0/0:19,0:19:48.16:0,48,2768	0/0:28,0:28:63.20:0,63,3800	0/0:24,0:24:66.22:0,66,4244	0/0:16,0:16:45.07:0,45,2719	0/0:15,0:15:39.13:0,39,2144	0/0:23,0:23:63.22:0,63,4039	0/0:14,0:14:39.13:0,39,2448	0/0:18,0:18:48.16:0,48,2980	0/0:21,0:21:57.20:0,57,3749	0/0:12,0:12:30.10:0,30,2054
chr10	29534995	.	AGGC	A	3014.78	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=10.957;DP=572;FS=2.134;HRun=0;HaplotypeScore=88.8666;InbreedingCoeff=0.8634;MQ=74.51;MQ0=0;MQRankSum=-3.445;QD=34.65;ReadPosRankSum=4.531;VQSLOD=4.3348;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,105,2523	0/0:11,0:11:33.11:0,33,795	0/1:10,0:10:0.43:0,0,490	0/0:15,0:15:3.85:0,4,654	0/0:36,0:36:99:0,108,2525	0/0:19,0:19:57.20:0,57,1404	0/0:17,0:17:51.15:0,51,1151	0/0:15,0:15:44.36:0,44,965	1/1:16,0:16:44.59:308,45,0	0/0:28,0:28:84.29:0,84,1984	0/0:22,0:22:66.23:0,66,1604	0/0:21,0:21:60.20:0,60,1420	0/0:15,0:15:45.14:0,45,1035	0/0:16,0:16:48.16:0,48,1151	0/0:14,0:14:42.13:0,42,955	0/0:18,0:18:33.59:0,34,1187	1/1:0,27:27:72.25:1340,72,0	1/1:0,34:34:81.28:1508,81,0	0/0:21,0:21:60.19:0,60,1358	0/0:25,0:25:69.24:0,69,1643	0/0:23,0:23:69.24:0,69,1670	0/0:19,0:19:55.43:0,55,1279	0/0:19,0:19:57.16:0,57,1202	0/0:23,0:23:69.22:0,69,1637	0/0:15,0:15:45.15:0,45,1070	0/0:20,0:20:60.21:0,60,1366	0/0:22,0:22:66.23:0,66,1597	0/0:15,0:15:42.14:0,42,985
chr10	29535693	.	C	CAAAT	3661.77	PASS	AB=0.846;AC=36;AF=0.750;AN=48;BaseQRankSum=-5.486;DP=277;FS=3.835;HRun=0;HaplotypeScore=52.6298;InbreedingCoeff=0.4258;MQ=69.86;MQ0=0;MQRankSum=3.600;QD=18.22;ReadPosRankSum=-1.310;VQSLOD=2.6387;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,0:14:17.29:197,17,0	1/1:4,0:6:9.03:158,9,0	0/0:16,0:14:3.01:0,3,47	./.	1/1:8,3:11:9.03:213,9,0	1/1:7,5:13:12.04:285,12,0	1/1:1,5:6:12.04:285,12,0	0/1:41,0:42:6.84:285,0,7	0/0:5,0:16:24.50:0,24,224	1/1:7,0:7:3.01:56,3,0	./.	1/1:3,3:6:9.03:214,9,0	1/1:6,2:9:6.02:142,6,0	0/0:4,0:4:3.01:0,3,47	1/1:7,3:10:9.03:214,9,0	1/1:5,2:7:6.02:142,6,0	0/0:6,0:9:8.98:0,9,76	0/0:8,0:14:5.93:0,6,45	0/1:5,4:9:32.10:269,0,32	1/1:10,2:13:6.02:142,6,0	./.	./.	1/1:5,1:6:3.01:71,3,0	1/1:3,1:4:3.01:71,3,0	1/1:4,1:6:6.02:139,6,0	1/1:3,6:9:18.06:423,18,0	1/1:10,7:17:11.81:284,12,0	1/1:5,1:6:3.01:71,3,0
chr10	29536054	.	A	AACACACACACAC	8662.94	PASS	AB=0.743;AC=39;AF=0.780;AN=50;BaseQRankSum=-2.981;DP=664;FS=4.724;HRun=0;HaplotypeScore=194.9958;InbreedingCoeff=0.1753;MQ=54.29;MQ0=9;MQRankSum=1.334;QD=15.07;ReadPosRankSum=2.453;VQSLOD=3.8012;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:19,0:42:4.59:142,0,5	1/1:9,0:9:21.06:516,21,0	0/1:27,0:9:20.79:21,0,129	0/1:31,0:14:21.03:21,0,51	1/1:15,0:15:12.04:326,12,0	1/1:9,10:27:15.05:541,15,0	1/1:35,0:35:24.65:458,25,0	1/1:24,0:22:36.03:712,36,0	./.	1/1:12,10:32:39.49:1044,39,0	0/0:6,4:16:1.55:0,2,4	0/1:8,11:22:0.55:58,0,1	0/1:10,6:23:0.01:0,0,0	0/1:11,4:23:0:0,0,0	1/1:8,15:38:12.04:453,12,0	1/1:8,11:25:6.02:186,6,0	1/1:20,0:42:20.58:703,21,0	0/1:10,0:21:1.25:297,0,1	1/1:15,0:16:27.05:597,27,0	0/0:6,5:13:1.55:0,2,4	1/1:36,0:36:6.97:409,7,0	1/1:9,8:26:3:117,3,0	./.	./.	1/1:12,0:12:6.71:216,7,0	1/1:12,7:25:27.44:677,27,0	1/1:15,1:17:33.05:935,33,0	1/1:0,0:5:6.02:233,6,0
chr10	29536549	.	TA	T	3663.41	PASS	AB=0.759;AC=39;AF=0.696;AN=56;BaseQRankSum=-2.089;DP=508;FS=0.575;HRun=15;HaplotypeScore=62.2860;InbreedingCoeff=0.2025;MQ=71.38;MQ0=1;MQRankSum=0.803;QD=8.36;ReadPosRankSum=1.868;VQSLOD=2.9245;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:13:29.84:0,30,251	0/1:6,0:6:17.46:29,0,17	0/0:20,2:12:4.27:0,4,77	0/1:12,0:10:14.60:15,0,18	0/1:21,11:35:48.03:249,0,48	0/1:9,12:22:21.41:142,0,21	1/1:7,10:18:36.12:215,36,0	1/1:16,16:32:19.84:258,20,0	1/1:4,1:13:15.16:55,15,0	1/1:8,14:22:53.14:342,53,0	1/1:8,8:16:28.54:176,29,0	1/1:9,10:19:23.57:154,24,0	1/1:14,4:19:22.17:129,22,0	1/1:4,4:9:19.75:121,20,0	1/1:8,11:19:26.41:171,26,0	0/1:13,6:20:45.95:112,0,46	0/0:6,0:19:14.50:0,15,91	0/0:6,0:15:8.52:0,9,43	1/1:9,12:21:38.31:235,38,0	1/1:7,13:20:13.82:209,14,0	0/1:6,3:10:4.16:30,0,4	1/1:5,7:12:0.28:127,0,0	1/1:8,12:20:35.86:231,36,0	0/1:7,3:10:28.49:81,0,28	0/1:7,9:17:1.10:98,0,1	1/1:25,5:30:13.82:181,14,0	1/1:5,7:14:20.62:113,21,0	0/1:8,11:21:31.94:193,0,32
chr10	29536668	.	G	GTGT	755.95	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-5.471;DP=556;FS=0.000;HRun=0;HaplotypeScore=74.2620;InbreedingCoeff=0.9435;MQ=70.77;MQ0=1;MQRankSum=-0.651;QD=39.79;ReadPosRankSum=1.438;VQSLOD=4.5167;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:63.21:0,63,999	0/0:7,0:7:18.06:0,18,285	0/0:15,0:13:11.36:0,11,288	0/0:10,0:9:18.05:0,18,237	0/0:26,0:26:60.20:0,60,945	0/0:20,0:20:57.19:0,57,904	0/0:16,0:16:45.15:0,45,713	0/0:28,0:28:75.24:0,75,1145	1/1:2,15:18:39.13:851,39,0	0/0:19,0:19:45.15:0,45,713	0/0:16,0:16:45.15:0,45,713	0/0:16,0:16:39.12:0,39,596	0/0:21,0:21:57.18:0,57,881	0/0:17,0:17:51.17:0,51,803	0/0:17,0:17:48.15:0,48,738	0/0:17,0:17:45.15:0,45,712	0/0:36,0:35:99:0,99,1515	0/0:21,0:21:60.16:0,60,924	0/0:25,0:25:60.15:0,60,862	0/0:30,0:30:84.29:0,84,1329	0/0:15,0:14:42.14:0,42,666	0/0:20,0:20:54.18:0,54,854	0/0:17,0:17:45.14:0,45,688	0/0:17,0:17:48.16:0,48,761	0/0:23,0:23:63.19:0,63,965	0/0:27,0:27:78.26:0,78,1215	0/0:25,0:25:66.18:0,66,994	0/0:12,0:12:18.06:0,18,278
chr10	29538371	.	GGTGGGGT	G	623.86	PASS	AB=0.636;AC=31;AF=0.816;AN=38;BaseQRankSum=-3.827;DP=122;FS=0.000;HRun=0;HaplotypeScore=21.9588;InbreedingCoeff=0.2960;MQ=76.14;MQ0=7;MQRankSum=-3.215;QD=10.06;ReadPosRankSum=-3.159;VQSLOD=0.4732;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:21,0:2:5.93:0,6,49	0/0:22,0:9:17.25:0,17,214	./.	1/1:5,0:5:5.96:44,6,0	1/1:7,0:7:10.46:66,10,0	1/1:5,0:5:5.99:53,6,0	1/1:1,0:1:3.01:39,3,0	./.	1/1:1,0:1:3.01:38,3,0	1/1:4,0:4:5.97:64,6,0	1/1:2,0:2:2.96:19,3,0	1/1:4,0:4:4.98:24,5,0	1/1:5,0:5:5.94:44,6,0	./.	1/1:2,0:2:3.01:30,3,0	1/1:5,0:4:5.90:37,6,0	0/1:3,4:6:53.36:84,0,53	./.	0/0:4,0:4:2.90:0,3,16	./.	./.	1/1:2,0:2:3.01:50,3,0	./.	1/1:3,0:3:3.59:10,4,0	1/1:6,0:6:8.97:89,9,0	1/1:3,0:2:3.01:52,3,0
chr10	29538372	.	GTGGGGT	G	778.05	PASS	AB=1.000;AC=31;AF=0.816;AN=38;BaseQRankSum=-3.560;DP=121;FS=0.000;HRun=0;HaplotypeScore=22.3567;InbreedingCoeff=0.3406;MQ=76.81;MQ0=7;MQRankSum=-2.940;QD=12.35;ReadPosRankSum=-3.036;VQSLOD=0.5951;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:21,0:3:8.93:0,9,100	0/0:22,0:9:16.67:0,17,195	./.	1/1:4,0:4:5.96:44,6,0	1/1:7,0:7:13.67:92,14,0	1/1:5,0:5:5.99:53,6,0	1/1:1,0:1:3.01:39,3,0	./.	1/1:1,0:1:3.01:38,3,0	1/1:5,0:5:8.97:93,9,0	1/1:2,0:2:2.96:19,3,0	1/1:4,0:4:6.23:33,6,0	1/1:5,0:5:5.94:44,6,0	./.	1/1:2,0:2:3.01:35,3,0	1/1:5,0:4:5.94:42,6,0	0/1:6,0:5:47.41:87,0,47	./.	0/0:3,0:3:2.60:0,3,10	./.	./.	1/1:2,0:2:3.01:51,3,0	./.	1/1:3,0:3:3.85:11,4,0	1/1:7,0:7:11.99:137,12,0	1/1:4,0:3:6.01:79,6,0
chr10	29538384	.	GT	G	1505.22	PASS	AB=1.000;AC=42;AF=0.808;AN=52;BaseQRankSum=-2.849;DP=159;FS=33.857;HRun=1;HaplotypeScore=27.5470;InbreedingCoeff=0.4722;MQ=80.76;MQ0=7;MQRankSum=-1.234;QD=14.07;ReadPosRankSum=-1.206;VQSLOD=0.5733;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:6:14.86:0,15,105	./.	0/0:21,0:6:14.56:0,15,171	0/0:20,1:9:15.86:0,16,173	1/1:5,0:5:14.99:125,15,0	1/1:7,0:7:17.90:140,18,0	1/1:4,0:4:9.62:62,10,0	1/1:4,0:4:5.50:36,5,0	1/1:1,0:1:2.96:19,3,0	./.	1/1:2,0:2:5.94:45,6,0	1/1:6,0:6:12.79:82,13,0	1/1:8,0:8:17.92:149,18,0	1/1:2,0:2:5.96:46,6,0	1/1:5,0:5:10.19:74,10,0	1/1:6,0:6:15:133,15,0	1/1:2,0:2:4.25:29,4,0	1/1:6,0:5:4.46:19,4,0	0/1:5,0:4:16.08:35,0,16	1/1:1,0:1:1.82:5,2,0	0/1:9,0:9:0.13:51,0,0	1/1:4,0:4:3:27,3,0	0/0:0,4:4:0.47:0,0,1	1/1:6,0:6:18:157,18,0	1/1:7,0:7:20.95:178,21,0	1/1:2,0:2:1.82:5,2,0	1/1:10,0:10:23.12:171,23,0	1/1:5,0:4:7.56:60,8,0
chr10	29541693	.	T	TACACACAC	14857.74	PASS	AB=0.833;AC=48;AF=0.889;AN=54;BaseQRankSum=-0.944;DP=591;FS=1.613;HRun=0;HaplotypeScore=158.7156;InbreedingCoeff=0.3436;MQ=56.50;MQ0=5;MQRankSum=-6.268;QD=27.36;ReadPosRankSum=-2.712;VQSLOD=4.0325;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:13,9:23:9.02:336,9,0	1/1:3,6:11:9.03:275,9,0	./.	0/0:18,0:13:6:0,6,99	1/1:10,14:25:21.07:765,21,0	1/1:8,1:20:12.03:329,12,0	1/1:7,7:18:15.05:558,15,0	1/1:30,0:30:63.95:1148,64,0	1/1:22,0:28:44.72:742,45,0	1/1:12,12:26:45.04:1294,45,0	1/1:22,0:23:11.48:422,11,0	1/1:5,9:18:9:488,9,0	1/1:13,7:22:5.90:238,6,0	1/1:8,9:19:18:601,18,0	1/1:13,10:27:30.10:1152,30,0	1/1:9,7:21:14.71:555,15,0	0/1:15,0:16:41.75:42,0,771	0/0:21,0:20:8.15:0,8,951	1/1:19,0:18:30.88:398,31,0	1/1:8,12:21:17.57:680,18,0	1/1:18,0:18:3.01:72,3,0	1/1:7,17:27:30.10:1218,30,0	0/1:17,8:29:35.23:651,0,35	1/1:12,4:18:3.01:123,3,0	1/1:3,7:13:3.01:123,3,0	1/1:14,14:32:44.95:1190,45,0	1/1:13,17:31:37:1212,37,0	1/1:2,3:5:6.02:247,6,0
chr10	29541720	.	A	ACACACACA	11653.36	PASS	AB=1.000;AC=48;AF=0.889;AN=54;BaseQRankSum=-2.454;DP=598;FS=3.755;HRun=0;HaplotypeScore=157.6097;InbreedingCoeff=0.3506;MQ=58.41;MQ0=3;MQRankSum=-6.263;QD=21.99;ReadPosRankSum=-2.938;VQSLOD=4.0050;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:21:5.88:269,6,0	1/1:11,0:11:6.02:188,6,0	./.	0/0:25,0:20:6:0,6,99	1/1:19,0:19:14.74:558,15,0	1/1:23,0:23:6.01:148,6,0	1/1:21,0:21:18.06:681,18,0	1/1:46,0:46:40.82:525,41,0	1/1:31,0:31:42.08:697,42,0	1/1:26,0:26:27.91:810,28,0	1/1:21,4:27:14.76:539,15,0	1/1:19,0:19:12.04:493,12,0	1/1:14,0:14:5.52:237,6,0	1/1:19,0:19:11.73:369,12,0	1/1:25,0:25:18.06:681,18,0	1/1:13,0:13:12.04:432,12,0	0/1:19,0:19:41.75:42,0,771	0/0:23,0:23:17.21:0,17,960	1/1:24,0:24:27.98:374,28,0	1/1:23,0:22:17.57:681,18,0	1/1:20,0:20:3.01:72,3,0	1/1:23,0:23:27.09:1099,27,0	0/1:21,0:21:35.31:650,0,35	1/1:12,0:12:6.02:231,6,0	1/1:10,0:10:3.01:123,3,0	1/1:25,0:25:24.01:551,24,0	1/1:32,0:30:28.44:956,28,0	1/1:6,0:6:6.02:247,6,0
chr10	29541891	.	T	TAA	1063.35	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=0.890;DP=627;FS=3.516;HRun=9;HaplotypeScore=77.2695;InbreedingCoeff=0.8804;MQ=77.04;MQ0=0;MQRankSum=-2.916;QD=22.15;ReadPosRankSum=-0.006;VQSLOD=2.9610;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,26:30:74.69:1073,75,0	0/0:16,0:16:36.04:0,36,375	0/0:21,0:21:33.23:0,33,454	0/0:22,0:23:0.15:0,0,323	0/0:33,0:33:81.10:0,81,841	0/0:28,0:28:75.16:0,75,788	0/0:21,0:22:61.05:0,61,667	0/0:33,0:33:46.23:0,46,659	1/1:2,0:18:32.32:111,32,0	0/0:26,0:25:37.09:0,37,602	0/0:15,0:15:45.07:0,45,460	0/0:14,0:14:36.08:0,36,383	0/0:19,0:19:42.03:0,42,436	0/0:26,0:26:69.11:0,69,721	0/0:21,0:21:57.11:0,57,598	0/0:18,0:18:54.12:0,54,566	0/0:22,0:22:63.11:0,63,650	0/0:14,0:14:36.03:0,36,363	0/0:15,0:15:39.03:0,39,396	0/0:29,0:29:66.13:0,66,695	0/0:17,0:17:42.08:0,42,446	0/0:29,0:29:75.11:0,75,781	0/0:21,0:22:45.06:0,45,534	0/0:15,0:15:42.10:0,42,447	0/0:18,0:19:33:0,33,406	0/0:31,0:31:69.12:0,69,727	0/0:30,0:29:78.18:0,78,828	0/0:20,0:20:53.14:0,53,549
chr10	29542427	.	TCA	T	734.33	PASS	AB=0.908;AC=19;AF=0.365;AN=52;BaseQRankSum=7.548;DP=650;FS=3.481;HRun=0;HaplotypeScore=102.3024;InbreedingCoeff=-0.0546;MQ=67.88;MQ0=3;MQRankSum=0.390;QD=2.02;ReadPosRankSum=-0.726;VQSLOD=2.1158;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:40:17.85:85,18,0	0/0:7,0:7:6.02:0,6,89	./.	./.	0/1:14,0:14:17.16:17,0,93	0/0:11,0:20:20.99:0,21,197	0/0:17,0:23:17.84:0,18,206	0/0:31,0:31:8.97:0,9,82	0/1:7,0:19:2.86:64,0,3	0/1:22,0:23:15.33:15,0,282	0/0:24,0:24:27.07:0,27,362	0/1:22,0:22:39.54:40,0,399	0/0:21,0:21:27.05:0,27,337	0/1:16,3:19:62.11:62,0,321	0/0:22,4:26:6.35:0,6,458	0/1:27,2:29:35:35,0,734	1/1:18,0:31:30.76:153,31,0	1/1:5,1:14:19.89:114,20,0	0/0:18,0:18:11.95:0,12,132	0/1:27,3:30:59.11:59,0,374	0/0:27,0:27:10.04:0,10,343	0/1:22,0:22:23.03:23,0,286	0/1:16,2:19:47.44:47,0,140	0/0:34,0:34:51.74:0,52,839	0/1:16,4:20:99:116,0,233	0/1:20,1:20:57.83:58,0,224	0/1:23,4:27:10.03:10,0,328	0/1:12,0:13:2.20:2,0,249
chr10	29543561	.	ATGTG	A	1551.70	PASS	AB=0.910;AC=37;AF=0.740;AN=50;BaseQRankSum=1.870;DP=647;FS=12.642;HRun=0;HaplotypeScore=127.1141;InbreedingCoeff=-0.1921;MQ=59.53;MQ0=11;MQRankSum=-0.780;QD=2.97;ReadPosRankSum=-1.388;VQSLOD=1.6052;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:36,0:36:0.78:2,1,0	1/1:11,0:10:1.46:4,1,0	./.	./.	1/1:12,3:15:6.02:92,6,0	1/1:19,1:20:3:46,3,0	1/1:27,2:29:2.91:45,3,0	0/0:35,0:35:0.47:0,0,1	1/1:7,0:20:20.96:185,21,0	1/1:30,0:30:11.63:100,12,0	1/1:11,0:11:5.05:48,5,0	0/1:28,0:29:78.48:78,0,125	0/1:17,2:20:20.07:196,0,20	1/1:15,0:15:3:26,3,0	0/1:23,3:26:13.81:56,0,14	0/1:25,1:28:83.36:142,0,83	0/1:20,0:24:18.57:19,0,52	0/1:13,0:12:20.33:20,0,37	1/1:19,0:19:2.89:18,3,0	0/0:10,1:11:2.22:0,2,7	1/1:58,1:58:3.01:46,3,0	1/1:16,0:16:2.37:8,2,0	./.	0/1:23,3:25:33.42:289,0,33	1/1:16,0:18:6.01:74,6,0	0/1:29,2:30:5.37:60,0,5	1/1:8,3:11:6.02:92,6,0	0/1:10,0:11:31.63:32,0,36
chr10	29543928	.	C	CA	11349.10	PASS	AB=0.882;AC=54;AF=0.964;AN=56;BaseQRankSum=-2.355;DP=598;FS=5.791;HRun=1;HaplotypeScore=209.8123;InbreedingCoeff=-0.0443;MQ=75.04;MQ0=0;MQRankSum=-4.798;QD=18.98;ReadPosRankSum=2.814;VQSLOD=4.8680;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:34,0:32:74.89:724,75,0	1/1:8,0:8:14.98:133,15,0	0/1:12,3:15:49.15:162,0,49	0/1:25,2:27:45.28:290,0,45	1/1:5,0:5:8.98:80,9,0	1/1:14,0:14:33.03:314,33,0	1/1:31,0:26:63.02:585,63,0	1/1:23,0:22:53.91:486,54,0	1/1:35,0:28:66.07:645,66,0	1/1:23,0:22:53.98:492,54,0	1/1:8,0:8:11.95:96,12,0	1/1:32,0:32:75.07:714,75,0	1/1:24,0:24:69.11:675,69,0	1/1:28,0:28:65.99:617,66,0	1/1:26,0:26:60.09:596,60,0	1/1:23,0:23:63.07:600,63,0	1/1:33,0:33:75.04:718,75,0	1/1:26,0:26:59.80:552,60,0	1/1:16,0:15:29.85:244,30,0	1/1:6,0:6:15.03:149,15,0	1/1:46,0:41:50.95:472,51,0	1/1:11,0:10:18.02:174,18,0	1/1:7,0:6:11.79:107,12,0	1/1:30,0:30:35.84:350,36,0	1/1:22,0:20:50.96:459,51,0	1/1:24,0:23:56.93:503,57,0	1/1:13,0:13:33.03:309,33,0	1/1:7,0:7:11.99:102,12,0
chr10	29546715	.	ACTCGT	A	2761.50	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=3.464;DP=685;FS=0.000;HRun=0;HaplotypeScore=191.9939;InbreedingCoeff=0.9998;MQ=78.88;MQ0=0;MQRankSum=-10.834;QD=46.81;ReadPosRankSum=-0.176;VQSLOD=3.3888;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,34:42:95.96:1907,96,0	0/0:15,0:15:45.13:0,45,1284	0/0:21,0:20:54.19:0,54,1615	0/0:24,0:23:50.52:0,51,1415	0/0:18,0:18:48.15:0,48,1449	0/0:21,0:20:54.19:0,54,1686	0/0:35,0:35:87.30:0,87,2654	0/0:30,0:30:81.27:0,81,2408	1/1:3,14:17:45.15:977,45,0	0/0:24,0:24:69.24:0,69,2168	0/0:13,0:13:33.09:0,33,904	0/0:30,0:30:90.29:0,90,2668	0/0:30,0:30:81.28:0,81,2570	0/0:18,0:18:54.17:0,54,1589	0/0:34,0:34:87.30:0,87,2759	0/0:28,0:28:81.28:0,81,2465	0/0:31,0:31:87.28:0,87,2629	0/0:19,0:19:54.19:0,54,1713	0/0:20,0:20:60.21:0,60,1753	0/0:16,0:16:39.13:0,39,1185	0/0:33,0:33:87.28:0,87,2602	0/0:21,0:21:63.22:0,63,1996	0/0:20,0:20:48.16:0,48,1343	0/0:26,0:26:72.25:0,72,2287	0/0:28,0:28:75.26:0,75,2218	0/0:26,0:26:75.23:0,75,2120	0/0:26,0:25:60.20:0,60,1779	0/0:19,0:19:45.15:0,45,1421
chr10	29548635	.	AG	A	1255.73	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.315;DP=569;FS=2.768;HRun=7;HaplotypeScore=55.7212;InbreedingCoeff=0.9976;MQ=88.65;MQ0=0;MQRankSum=-3.428;QD=23.69;ReadPosRankSum=2.002;VQSLOD=3.8972;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,31:32:84.19:857,84,0	0/0:8,0:8:24.08:0,24,302	0/0:27,0:27:54.12:0,54,635	0/0:19,0:19:36.50:0,36,449	0/0:15,0:15:45.14:0,45,561	0/0:24,0:24:69.21:0,69,855	0/0:20,0:20:51.16:0,51,642	0/0:29,0:29:81.23:0,81,973	1/1:2,19:21:51.12:520,51,0	0/0:20,0:20:51.16:0,51,636	0/0:28,0:28:75.24:0,75,942	0/0:25,0:25:75.22:0,75,929	0/0:11,0:11:24.08:0,24,299	0/0:15,0:15:45.14:0,45,558	0/0:23,0:23:60.18:0,60,743	0/0:17,0:17:42.13:0,42,528	0/0:18,0:18:54.17:0,54,674	0/0:28,0:28:69.04:0,69,830	0/0:16,0:16:48.15:0,48,603	0/0:21,0:21:48.15:0,48,602	0/0:19,0:19:51.15:0,51,625	0/0:26,0:26:69.19:0,69,829	0/0:16,0:16:42.11:0,42,502	0/0:14,0:14:33.11:0,33,415	0/0:22,0:22:63.19:0,63,780	0/0:18,0:18:48.15:0,48,603	0/0:21,0:21:60.19:0,60,744	0/0:16,0:16:48.14:0,48,589
chr10	29549748	.	AAC	A	1726.88	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.259;DP=530;FS=1.322;HRun=0;HaplotypeScore=62.0421;InbreedingCoeff=0.9887;MQ=76.03;MQ0=0;MQRankSum=-0.481;QD=33.86;ReadPosRankSum=1.213;VQSLOD=5.7183;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,38:39:99:1428,102,0	0/0:5,0:5:15.05:0,15,266	0/0:15,0:15:36.11:0,36,611	0/0:7,0:7:21.05:0,21,300	0/0:15,0:15:42.13:0,42,726	0/0:15,0:14:45.15:0,45,810	0/0:24,0:24:72.25:0,72,1277	0/0:24,0:24:60.21:0,60,1073	1/1:0,12:12:30.10:420,30,0	0/0:20,0:20:57.19:0,57,978	0/0:9,0:9:27.08:0,27,457	0/0:20,0:20:57.18:0,57,979	0/0:13,0:13:36.12:0,36,642	0/0:16,0:16:39.13:0,39,697	0/0:23,0:23:60.19:0,60,1044	0/0:13,0:13:36.11:0,36,611	0/0:23,0:23:63.19:0,63,1082	0/0:21,0:21:51.14:0,51,872	0/0:24,0:24:60.10:0,60,975	0/0:16,0:16:48.15:0,48,835	0/0:28,0:28:81.26:0,81,1427	0/0:18,0:18:54.11:0,54,879	0/0:20,0:20:54.16:0,54,914	0/0:25,0:25:72.25:0,72,1286	0/0:21,0:21:57.19:0,57,998	0/0:13,0:13:36.12:0,36,622	0/0:36,0:35:93.26:0,93,1576	0/0:15,0:15:45.14:0,45,763
chr10	29550521	.	CCTCTCTCTCTTTCTCTCT	C	199.58	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.335;DP=621;FS=0.000;HRun=0;HaplotypeScore=246.4225;InbreedingCoeff=0.7895;MQ=57.64;MQ0=9;MQRankSum=-2.561;QD=9.07;ReadPosRankSum=-2.278;VQSLOD=2.1938;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:38:84.04:0,84,3621	0/0:6,0:6:8.99:0,9,174	0/0:60,0:25:27.60:0,28,286	0/0:66,0:27:31.98:0,32,476	0/0:19,0:18:27.07:0,27,1347	0/0:15,0:15:32.65:0,33,1160	0/0:22,0:22:61.96:0,62,2226	0/0:32,0:32:51.12:0,51,1273	1/1:3,17:21:6.02:280,6,0	0/0:31,0:30:74.01:0,74,3027	0/0:20,0:19:48.14:0,48,2996	0/0:20,0:19:42.03:0,42,1800	0/0:10,0:10:19.79:0,20,801	0/0:14,0:14:33.04:0,33,1123	0/0:13,0:11:32.63:0,33,1263	0/0:18,0:17:39.02:0,39,1822	0/0:14,0:14:26.59:0,27,288	0/0:8,0:8:21:0,21,379	0/0:17,0:17:42.08:0,42,1639	0/0:20,0:19:43.52:0,44,1387	0/0:16,0:15:27.03:0,27,471	0/0:21,0:20:51.13:0,51,2639	0/0:26,0:26:44.61:0,45,810	0/0:19,0:17:21.41:0,21,596	0/0:12,0:12:33.01:0,33,1447	0/0:27,0:25:60.17:0,60,3375	0/0:21,0:20:57.03:0,57,1819	0/0:12,0:10:12.03:0,12,433
chr10	29550532	.	T	TTCTC	1231.99	PASS	AB=0.943;AC=27;AF=0.519;AN=52;BaseQRankSum=0.277;DP=622;FS=1.060;HRun=0;HaplotypeScore=119.2245;InbreedingCoeff=-0.2439;MQ=48.14;MQ0=10;MQRankSum=-0.085;QD=2.84;ReadPosRankSum=0.167;VQSLOD=2.3129;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:40,0:45:68.43:68,0,137	0/0:7,0:7:5.65:0,6,39	./.	0/0:54,0:16:0.47:0,0,1	0/1:19,0:20:19.71:20,0,73	0/1:19,0:19:4.43:4,0,84	0/1:25,1:25:24.26:24,0,82	0/0:31,0:30:0.15:0,0,16	0/0:21,0:20:5.84:0,6,41	0/1:25,0:26:43.10:43,0,187	0/1:19,0:20:46.77:47,0,57	0/0:20,0:21:17.98:0,18,251	0/1:12,0:14:19.24:19,0,38	1/1:15,0:16:1.19:9,1,0	0/1:17,0:15:20:202,0,20	0/1:15,0:17:24.85:25,0,77	0/1:12,0:12:3.96:4,0,22	./.	1/1:15,6:21:21.98:411,22,0	1/1:21,0:21:9.22:109,9,0	0/1:17,0:15:0:0,0,0	0/1:18,0:18:16.93:17,0,37	1/1:19,7:26:3.48:72,3,0	1/1:9,10:18:6.02:142,6,0	0/1:17,0:17:8:8,0,61	0/1:21,0:23:49.24:49,0,109	0/1:19,1:21:25.59:86,0,26	1/1:6,0:5:3.68:15,4,0
chr10	29550590	.	GACACACACAC	G	2186.89	PASS	AB=0.809;AC=23;AF=0.460;AN=50;BaseQRankSum=-1.699;DP=618;FS=1.805;HRun=0;HaplotypeScore=158.7483;InbreedingCoeff=0.2029;MQ=42.47;MQ0=64;MQRankSum=-1.191;QD=7.52;ReadPosRankSum=0.545;VQSLOD=2.6761;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:35:21.07:0,21,665	0/0:7,0:7:3.01:0,3,41	./.	./.	./.	0/1:13,0:14:11.34:67,0,11	1/1:14,9:21:8.99:198,9,0	0/0:16,0:15:5.85:0,6,37	0/0:26,0:27:30.09:0,30,961	0/1:11,4:16:0.99:190,0,1	0/1:21,0:19:3.84:194,0,4	1/1:12,10:23:9.02:204,9,0	1/1:8,0:11:10.28:167,10,0	1/1:11,1:14:6:68,6,0	0/1:12,8:20:0:0,0,0	0/1:9,1:19:33.47:253,0,33	0/0:7,0:16:18.04:0,18,268	0/0:12,0:11:19.17:0,19,196	0/1:11,1:12:17.35:83,0,17	0/1:14,7:20:0:0,0,0	0/1:16,0:14:66.84:144,0,67	0/0:15,7:23:2.36:0,2,18	0/1:11,3:14:0.24:0,0,0	0/0:14,0:15:1.41:0,1,4	1/1:9,5:15:3.48:39,3,0	0/1:17,4:20:0.34:241,0,0	0/1:11,10:21:11.80:324,0,12	1/1:1,3:4:6.02:159,6,0
chr10	29550594	.	C	CAG	261.42	PASS	AB=0.948;AC=6;AF=0.107;AN=56;BaseQRankSum=-0.374;DP=601;FS=9.266;HRun=0;HaplotypeScore=127.0698;InbreedingCoeff=-0.1695;MQ=43.02;MQ0=60;MQRankSum=1.375;QD=2.01;ReadPosRankSum=-0.885;VQSLOD=1.0838;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:21,14:36:99:242,0,115	0/0:7,0:7:11.60:0,12,82	0/0:54,0:4:11.95:0,12,100	0/0:76,0:7:17.95:0,18,153	0/0:15,0:14:5.99:0,6,48	0/1:14,0:14:27.32:27,0,64	0/0:23,0:20:3.21:0,3,111	0/0:17,0:16:46.90:0,47,334	0/1:30,0:29:65.76:66,0,78	0/0:16,0:16:11.98:0,12,273	0/1:21,0:18:22.66:23,0,192	0/0:23,0:23:23.92:0,24,190	0/0:11,0:11:20.72:0,21,144	0/0:14,0:14:17.60:0,18,127	0/0:18,0:18:8.96:0,9,72	0/0:19,0:19:31.96:0,32,220	0/0:16,0:16:5.41:0,5,104	0/0:13,0:11:20.77:0,21,124	0/0:12,0:12:19.18:0,19,179	0/1:22,0:21:10.14:10,0,81	0/0:17,0:14:13:0,13,78	0/0:23,0:23:13.37:0,13,115	0/0:16,0:15:8.81:0,9,62	0/0:17,0:16:5.98:0,6,47	0/0:14,0:14:3.88:0,4,27	0/0:21,0:19:50.73:0,51,413	0/0:23,0:21:0.48:0,0,200	0/1:5,0:5:12.04:12,0,52
chr10	29551629	.	CT	C	822.15	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.560;DP=568;FS=0.673;HRun=7;HaplotypeScore=74.0998;InbreedingCoeff=0.9754;MQ=76.34;MQ0=0;MQRankSum=-2.768;QD=21.08;ReadPosRankSum=1.034;VQSLOD=3.1805;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,35:39:90.67:917,91,0	0/0:11,0:11:30.10:0,30,377	0/0:17,0:17:26.48:0,26,319	0/0:17,0:17:17.45:0,17,254	0/0:26,0:26:66.21:0,66,830	0/0:33,0:33:90.25:0,90,1103	0/0:9,0:9:18.06:0,18,226	0/0:42,0:43:86.80:0,87,1106	0/0:11,0:11:21.05:0,21,240	0/0:23,0:23:60.19:0,60,755	0/0:26,0:26:69.21:0,69,855	0/0:15,0:15:42.09:0,42,488	0/0:17,0:17:48.15:0,48,604	0/0:14,0:14:42.13:0,42,527	0/0:21,0:21:57.18:0,57,717	0/0:16,0:16:42.13:0,42,528	0/0:21,0:21:52.44:0,52,676	0/0:14,0:14:36.12:0,36,453	0/0:21,0:21:48.15:0,48,604	0/0:24,0:24:66.16:0,66,800	0/0:11,0:11:30.08:0,30,364	0/0:12,0:12:27.09:0,27,340	0/0:24,0:24:57.18:0,57,717	0/0:10,0:10:30.10:0,30,377	0/0:26,0:26:63.15:0,63,748	0/0:26,0:26:69.22:0,69,868	0/0:22,0:22:60.19:0,60,755	0/0:19,0:19:45.14:0,45,566
chr10	29551981	.	TTC	T	379.41	PASS	AB=1.000;AC=6;AF=0.107;AN=56;BaseQRankSum=-5.900;DP=548;FS=15.733;HRun=0;HaplotypeScore=105.4232;InbreedingCoeff=0.3170;MQ=64.43;MQ0=1;MQRankSum=-2.270;QD=4.46;ReadPosRankSum=-4.668;VQSLOD=-0.0234;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:25:2.72:3,0,525	0/0:5,0:5:11.76:0,12,97	0/0:16,0:13:30.09:0,30,464	0/0:10,0:9:18:0,18,240	0/0:21,0:21:18.55:0,19,490	0/0:15,0:15:42.07:0,42,411	0/0:21,0:20:21.92:0,22,457	0/0:28,0:27:60.14:0,60,669	1/1:0,14:14:30.10:458,30,0	0/0:25,0:25:32.26:0,32,610	0/0:16,0:16:10.50:0,11,348	0/1:17,0:17:23.77:24,0,316	0/0:23,0:23:51.06:0,51,492	0/0:14,0:14:28.94:0,29,326	0/0:25,0:25:66.07:0,66,629	0/0:15,0:15:10.64:0,11,362	0/0:33,0:33:90.23:0,90,1471	0/0:21,0:21:57.18:0,57,968	0/0:25,0:25:75.11:0,75,759	0/0:22,0:22:15.55:0,16,505	0/1:12,0:12:1.39:1,0,243	0/1:16,0:16:4.10:4,0,336	0/0:13,0:13:38.81:0,39,338	0/0:30,0:30:35.96:0,36,568	0/0:19,0:19:22.59:0,23,459	0/0:18,0:18:51:0,51,492	0/0:31,0:31:46.39:0,46,665	0/0:17,0:17:24:0,24,393
chr10	29551983	.	C	CT	12484.32	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-9.314;DP=550;FS=0.538;HRun=8;HaplotypeScore=59.4641;InbreedingCoeff=0.9373;MQ=65.57;MQ0=1;MQRankSum=-0.773;QD=27.26;ReadPosRankSum=0.812;VQSLOD=5.4022;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,24:27:65.98:739,66,0	1/1:2,4:6:9.03:104,9,0	0/0:14,0:11:20.97:0,21,183	0/0:10,0:9:7.90:0,8,80	1/1:2,19:21:57.17:658,57,0	1/1:1,15:16:39.12:450,39,0	1/1:6,14:19:42.12:482,42,0	1/1:4,24:27:66.19:759,66,0	0/0:14,0:14:4.71:0,5,11	1/1:2,24:26:72.20:821,72,0	1/1:1,15:16:42.02:466,42,0	1/1:2,16:18:39.11:449,39,0	1/1:4,20:24:45.13:519,45,0	1/1:1,12:13:33.10:381,33,0	1/1:6,19:25:54.09:606,54,0	1/1:1,15:16:42.12:485,42,0	0/0:33,0:33:77.02:0,77,683	0/0:21,0:21:53.71:0,54,478	1/1:3,21:24:63.17:714,63,0	1/1:2,20:22:48.14:554,48,0	1/1:0,11:11:27.08:311,27,0	1/1:1,15:16:42.08:470,42,0	1/1:2,12:14:36.11:415,36,0	1/1:6,24:30:54.16:622,54,0	1/1:3,15:18:45.13:519,45,0	1/1:0,18:18:51.14:579,51,0	1/1:4,27:31:72.21:829,72,0	1/1:1,16:17:48.14:553,48,0
chr10	29553470	.	GCA	G	4568.38	PASS	AC=40;AF=0.741;AN=54;BaseQRankSum=0.279;DP=575;FS=12.322;HRun=0;HaplotypeScore=92.8343;InbreedingCoeff=0.6351;MQ=48.64;MQ0=70;MQRankSum=3.168;QD=11.84;ReadPosRankSum=2.452;VQSLOD=4.0216;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:11:2.99:0,3,23	1/1:8,0:8:3:29,3,0	0/0:27,0:10:12.04:0,12,156	0/0:29,0:6:11.55:0,12,81	1/1:15,0:13:8.74:73,9,0	1/1:28,1:26:3.01:38,3,0	1/1:22,0:21:3.01:38,3,0	1/1:7,6:11:18.05:212,18,0	0/0:16,0:11:1.81:0,2,6	1/1:23,0:20:47.71:529,48,0	1/1:8,2:10:15.03:188,15,0	1/1:28,0:23:2.90:30,3,0	1/1:16,4:17:35.94:423,36,0	1/1:12,0:11:27.07:324,27,0	1/1:14,2:16:14.54:157,15,0	1/1:14,0:14:0.78:24,1,0	0/0:28,0:27:74.06:0,74,1020	0/0:23,0:22:22.48:0,22,702	1/1:17,2:14:29.68:344,30,0	1/1:11,1:11:9.03:109,9,0	1/1:50,0:43:63.20:794,63,0	1/1:21,1:19:3.01:41,3,0	0/0:16,0:10:0:0,0,1	1/1:26,1:24:45.10:549,45,0	./.	1/1:24,0:19:47.29:525,47,0	1/1:12,0:12:8.85:80,9,0	1/1:9,0:5:6.01:60,6,0
chr10	29553481	.	CACCACACA	C	5445.59	PASS	AB=0.677;AC=39;AF=0.696;AN=56;BaseQRankSum=-1.549;DP=572;FS=1.900;HRun=0;HaplotypeScore=120.1565;InbreedingCoeff=0.4589;MQ=47.32;MQ0=79;MQRankSum=3.271;QD=13.09;ReadPosRankSum=-0.991;VQSLOD=3.8706;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:10:2.99:0,3,23	1/1:0,6:6:6.02:151,6,0	0/0:24,0:7:12.04:0,12,156	0/0:26,0:5:11.55:0,12,81	1/1:2,0:12:8.81:72,9,0	1/1:5,21:23:3.01:90,3,0	0/1:4,19:21:11.72:14,0,12	1/1:13,0:11:17.93:212,18,0	1/1:17,0:12:3.71:55,4,0	1/1:6,19:23:57.17:890,57,0	1/1:6,2:9:15.05:211,15,0	0/0:7,0:23:5.38:0,5,46	1/1:18,0:17:39.13:595,39,0	0/1:14,0:12:23.67:257,0,24	1/1:10,2:13:14.81:199,15,0	1/1:1,11:12:11.86:163,12,0	0/0:31,0:30:83.31:0,83,2538	0/0:23,0:22:55.79:0,56,1693	1/1:16,0:11:30.09:391,30,0	1/1:10,1:11:11.76:147,12,0	1/1:47,0:38:63.07:818,63,0	1/1:5,0:18:3.01:31,3,0	0/1:9,7:12:0.13:0,0,0	1/1:29,2:27:45.10:623,45,0	1/1:7,18:21:5.63:53,6,0	1/1:7,0:21:25.87:423,26,0	0/1:0,0:12:19.77:23,0,20	0/1:7,0:8:26.24:26,0,29
chr10	29553484	.	CACACACA	C	296.26	PASS	AB=0.969;AC=18;AF=0.321;AN=56;BaseQRankSum=6.055;DP=594;FS=45.934;HRun=0;HaplotypeScore=137.1148;InbreedingCoeff=-0.0068;MQ=47.15;MQ0=83;MQRankSum=-2.208;QD=1.13;ReadPosRankSum=-0.615;VQSLOD=0.8701;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:9:5.27:28,5,0	0/1:6,0:6:9.17:33,0,9	0/0:21,0:6:11.87:0,12,140	0/0:26,0:5:11.92:0,12,136	0/0:13,0:12:2.94:0,3,19	1/1:27,0:24:4.23:26,4,0	0/0:25,0:23:6.22:0,6,69	0/0:13,0:11:32.41:0,32,283	0/1:17,0:13:6.64:42,0,7	0/1:26,1:23:94.01:94,0,210	0/1:10,1:10:28.11:28,0,42	0/0:30,0:24:6.02:0,6,86	0/1:19,2:18:64.29:64,0,115	0/0:13,0:11:26.38:0,26,198	0/1:14,0:14:38.58:39,0,55	0/1:13,0:13:22.40:38,0,22	0/0:34,0:33:90.69:0,91,2323	0/0:24,0:22:61.03:0,61,1554	0/0:20,0:14:12.35:0,12,165	0/1:11,1:11:17.07:17,0,36	0/0:53,0:41:49.49:0,49,296	1/1:21,0:18:2.04:6,2,0	0/1:18,2:13:0.01:0,0,1	0/0:33,0:29:13.26:0,13,209	0/1:25,0:21:11.16:24,0,11	0/0:26,0:21:36.52:0,37,362	0/1:12,0:12:6.46:6,0,56	0/1:13,0:8:0.88:1,0,43
chr10	29554066	.	GGGA	G	925.98	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.145;DP=630;FS=1.767;HRun=0;HaplotypeScore=92.1559;InbreedingCoeff=0.9672;MQ=88.52;MQ0=0;MQRankSum=-4.460;QD=42.09;ReadPosRankSum=1.501;VQSLOD=5.1145;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:75.26:0,75,1706	0/0:11,0:11:33.11:0,33,755	0/0:25,0:25:72.25:0,72,1615	0/0:22,0:22:28.33:0,28,1046	0/0:15,0:15:42.14:0,42,907	0/0:26,0:26:66.21:0,66,1448	0/0:26,0:26:69.24:0,69,1592	0/0:32,0:32:96.33:0,96,2192	1/1:1,21:22:60.21:1021,60,0	0/0:20,0:20:45.15:0,45,1033	0/0:11,0:11:24.08:0,24,507	0/0:36,0:36:99:0,99,2237	0/0:31,0:31:90.31:0,90,2027	0/0:20,0:20:54.17:0,54,1191	0/0:24,0:24:72.25:0,72,1653	0/0:22,1:23:12.11:0,12,1329	0/0:31,0:31:81.28:0,81,1868	0/0:27,0:27:81.26:0,81,1797	0/0:23,0:23:63.20:0,63,1379	0/0:20,0:20:54.19:0,54,1232	0/0:28,0:28:84.29:0,84,1935	0/0:15,0:15:33.11:0,33,755	0/0:17,0:17:48.16:0,48,1054	0/0:21,0:21:60.21:0,60,1384	0/0:21,0:21:63.22:0,63,1453	0/0:18,0:18:47.84:0,48,1106	0/0:29,0:28:84.26:0,84,1826	0/0:10,0:10:30.10:0,30,692
chr10	29555116	.	AGATGTGAT	A	28000.16	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=10.597;DP=511;FS=32.529;HRun=0;HaplotypeScore=145.2677;InbreedingCoeff=0.9748;MQ=69.36;MQ0=0;MQRankSum=-12.767;QD=67.80;ReadPosRankSum=2.542;VQSLOD=2.7143;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,23:23:54.10:1577,54,0	1/1:0,7:7:18.06:525,18,0	0/0:20,0:19:57.18:0,57,1816	0/0:12,0:12:27.04:0,27,859	1/1:0,19:19:39.13:1136,39,0	1/1:0,20:20:45.11:1243,45,0	1/1:1,19:20:45.15:1309,45,0	1/1:2,26:28:75.22:2048,75,0	0/0:24,0:24:69.24:0,69,3067	1/1:1,18:19:51.17:1450,51,0	1/1:0,16:16:36.08:947,36,0	1/1:0,23:23:63.22:1836,63,0	1/1:0,26:26:63.22:1841,63,0	1/1:1,22:23:51.18:1475,51,0	1/1:0,18:18:30.10:877,30,0	1/1:0,17:17:45.15:1316,45,0	0/0:25,0:25:72.25:0,72,3166	0/0:17,0:17:51.18:0,51,2305	1/1:9,12:21:32.16:1177,32,0	1/1:0,24:24:69.19:1934,69,0	1/1:0,9:9:18.06:516,18,0	1/1:0,13:13:27.09:789,27,0	1/1:3,6:9:24.08:701,24,0	1/1:0,8:8:12.04:333,12,0	1/1:0,21:21:54.10:1439,54,0	1/1:0,24:24:66.17:1862,66,0	1/1:1,19:20:48.16:1404,48,0	1/1:0,5:5:9.03:263,9,0
chr10	29555978	.	G	GAA	7054.99	PASS	AC=46;AF=0.920;AN=50;BaseQRankSum=2.297;DP=493;FS=27.606;HRun=11;HaplotypeScore=150.3568;InbreedingCoeff=0.7974;MQ=35.23;MQ0=39;MQRankSum=-1.465;QD=16.37;ReadPosRankSum=-3.177;VQSLOD=0.6597;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:23,6:23:41.38:431,41,0	1/1:3,3:8:24.03:293,24,0	./.	./.	1/1:22,4:27:31.15:313,31,0	1/1:8,2:10:15.01:181,15,0	1/1:13,2:11:7.27:90,7,0	1/1:14,8:24:8.97:389,9,0	./.	1/1:17,5:18:5.92:318,6,0	1/1:8,8:17:29.65:328,30,0	1/1:9,7:16:32.94:403,33,0	1/1:14,5:19:35.39:386,35,0	1/1:9,3:12:13.04:119,13,0	1/1:6,6:12:18.03:229,18,0	1/1:10,11:20:48.56:630,49,0	0/0:42,0:40:27.80:0,28,282	0/0:18,0:16:17.61:0,18,174	1/1:13,3:13:13.99:222,14,0	1/1:19,5:24:30.21:433,30,0	1/1:3,1:3:6.36:59,6,0	1/1:11,3:13:22.45:243,22,0	1/1:15,4:19:34.84:320,35,0	1/1:12,1:10:12:132,12,0	1/1:19,4:24:43.37:395,43,0	1/1:22,4:28:33.69:333,34,0	1/1:16,5:18:29.98:346,30,0	1/1:18,6:19:39.30:465,39,0
chr10	29556553	.	A	AAAC	8751.92	PASS	AB=0.933;AC=42;AF=0.750;AN=56;BaseQRankSum=-0.076;DP=616;FS=7.670;HRun=0;HaplotypeScore=158.4115;InbreedingCoeff=0.1016;MQ=63.74;MQ0=11;MQRankSum=-9.138;QD=17.19;ReadPosRankSum=2.661;VQSLOD=4.3998;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:37,0:37:28.21:244,28,0	1/1:9,3:12:27.51:359,28,0	0/0:51,0:26:54.14:0,54,526	0/0:56,0:23:31.04:0,31,325	1/1:26,7:33:15.76:732,16,0	1/1:23,3:26:40.19:605,40,0	1/1:17,6:23:38.37:501,38,0	0/1:28,5:33:99:397,0,202	0/1:15,0:15:12.33:12,0,296	0/1:17,4:21:14.60:421,0,15	0/1:12,1:13:36.62:200,0,37	1/1:10,2:12:24.04:279,24,0	1/1:15,2:17:11.07:292,11,0	1/1:15,2:17:15:348,15,0	1/1:23,1:24:33.05:358,33,0	1/1:4,1:5:15.04:182,15,0	0/1:26,1:27:57.54:425,0,58	0/1:12,0:12:0.91:143,0,1	0/1:20,2:21:1.95:301,0,2	0/1:25,0:25:34.99:247,0,35	1/1:4,2:5:8.95:107,9,0	0/1:15,2:17:0.19:315,0,0	1/1:14,4:18:28.46:539,28,0	1/1:8,2:9:8.98:99,9,0	1/1:26,3:31:55.47:662,55,0	0/1:20,2:22:40.84:394,0,41	1/1:20,3:24:29.88:403,30,0	1/1:5,2:7:12.04:188,12,0
chr10	29556555	.	A	AC	2321.41	PASS	AB=0.977;AC=37;AF=0.661;AN=56;BaseQRankSum=5.326;DP=601;FS=3.454;HRun=0;HaplotypeScore=164.8786;InbreedingCoeff=-0.0356;MQ=64.52;MQ0=11;MQRankSum=-8.078;QD=4.87;ReadPosRankSum=5.635;VQSLOD=3.4451;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:38,0:38:3.06:50,3,0	1/1:12,0:12:9.36:111,9,0	0/0:52,0:26:62.29:0,62,538	0/0:55,0:23:23.68:0,24,361	0/1:32,1:33:17.78:187,0,18	1/1:23,2:25:25.44:216,25,0	1/1:20,0:20:17.30:146,17,0	0/1:31,0:31:99:118,0,192	0/0:16,0:16:42.73:0,43,454	0/1:19,0:19:55.56:126,0,56	0/1:14,0:14:28.89:46,0,29	1/1:12,0:12:14.09:69,14,0	1/1:17,0:17:0.02:109,0,0	0/1:15,1:16:0.27:119,0,0	1/1:22,0:22:21.69:93,22,0	0/1:5,0:5:4.25:25,0,4	0/1:25,0:26:53.58:110,0,54	0/1:9,1:10:13.30:15,0,13	0/1:21,0:20:94.27:94,0,95	0/1:23,0:23:37.91:86,0,38	0/1:6,0:5:1.48:35,0,1	0/1:16,0:16:3.18:64,0,3	1/1:18,0:18:2.30:133,2,0	1/1:10,0:9:7.44:37,7,0	1/1:31,0:31:32:183,32,0	0/1:20,2:22:65.98:148,0,66	1/1:23,0:23:21.90:119,22,0	1/1:7,0:7:10.08:48,10,0
chr10	29556561	.	CA	C	1394.79	PASS	AB=0.886;AC=35;AF=0.625;AN=56;BaseQRankSum=-2.343;DP=591;FS=4.041;HRun=12;HaplotypeScore=164.6189;InbreedingCoeff=-0.0931;MQ=66.96;MQ0=10;MQRankSum=-3.356;QD=2.95;ReadPosRankSum=1.321;VQSLOD=0.5567;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:17.26:0,17,79	1/1:6,5:11:15.47:106,15,0	0/1:55,0:27:30.31:30,0,135	0/0:52,1:22:7.65:0,8,188	0/1:27,7:34:7.92:143,0,8	1/1:18,3:21:2.89:52,3,0	1/1:12,7:20:6:128,6,0	0/1:21,8:29:75.57:76,0,194	0/0:17,0:17:40.92:0,41,255	1/1:11,7:18:15.70:182,16,0	0/1:12,1:13:8.09:8,0,40	1/1:10,2:12:1:34,1,0	1/1:13,2:15:3.10:33,3,0	0/1:11,3:14:0.29:56,0,0	0/1:20,1:21:10.05:12,0,10	0/1:4,1:5:1.92:14,0,2	1/1:20,3:24:4.30:105,4,0	1/1:10,1:11:4.23:26,4,0	0/1:19,3:21:28.59:115,0,29	0/1:19,0:19:13.52:14,0,14	1/1:7,2:8:6.43:43,6,0	0/1:14,3:17:11.41:83,0,11	1/1:13,5:18:4.95:101,5,0	0/0:10,2:11:1.72:0,2,5	0/1:24,5:29:26.10:85,0,26	0/1:19,2:22:24.31:24,0,52	1/1:21,4:25:6.03:67,6,0	0/1:8,1:9:15.46:15,0,23
chr10	29556562	.	A	AAAACAAAAAAAC	26955.56	PASS	AB=0.620;AC=47;AF=0.839;AN=56;BaseQRankSum=-9.545;DP=630;FS=11.084;HRun=0;HaplotypeScore=163.5087;InbreedingCoeff=0.5327;MQ=66.69;MQ0=10;MQRankSum=-6.330;QD=53.17;ReadPosRankSum=6.797;VQSLOD=2.9812;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:34,0:34:21.07:987,21,0	1/1:5,5:11:24.06:666,24,0	0/0:54,0:27:27.92:0,28,475	0/0:52,0:21:13.81:0,14,408	1/1:10,18:36:68.98:2201,69,0	1/1:7,13:24:39.13:1803,39,0	1/1:9,10:25:11.02:723,11,0	1/1:28,0:28:40.67:1495,41,0	0/0:17,0:17:26.62:0,27,550	1/1:7,9:20:50.82:1125,51,0	0/1:3,9:13:3.44:950,0,3	1/1:2,10:13:20.78:1004,21,0	1/1:5,10:17:18.05:831,18,0	1/1:5,6:17:27.07:1018,27,0	1/1:2,13:23:30.10:1608,30,0	1/1:3,3:6:13.27:596,13,0	0/1:16,0:27:99:696,0,105	0/1:4,0:14:14.42:123,0,14	1/1:7,12:22:58.08:1406,58,0	1/1:3,15:21:29.82:1166,30,0	1/1:3,5:9:9.01:363,9,0	1/1:7,8:18:0.05:831,0,0	1/1:9,8:22:40.04:1537,40,0	1/1:4,6:12:5.90:207,6,0	1/1:9,16:32:48.14:2014,48,0	1/1:7,14:24:63.11:2120,63,0	1/1:4,11:27:27.53:1051,28,0	1/1:2,5:9:11.93:434,12,0
chr10	29556563	.	A	AAACAAAAAAAC	19396.19	PASS	AB=0.994;AC=44;AF=0.786;AN=56;BaseQRankSum=-4.592;DP=516;FS=15.717;HRun=0;HaplotypeScore=159.5799;InbreedingCoeff=0.2810;MQ=70.21;MQ0=10;MQRankSum=-9.073;QD=49.35;ReadPosRankSum=10.122;VQSLOD=2.5619;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:0,29:38:21.07:1127,21,0	1/1:9,0:9:16.23:413,16,0	0/0:54,0:26:47.39:0,47,523	0/0:51,0:22:23.13:0,23,514	1/1:27,0:27:35.81:1555,36,0	1/1:19,0:19:39.12:1448,39,0	1/1:18,0:18:5.70:432,6,0	1/1:27,0:28:13.80:1216,14,0	0/0:17,0:17:29.38:0,29,593	1/1:14,0:14:22.92:498,23,0	0/1:8,0:8:22.78:729,0,23	1/1:9,0:9:20.95:780,21,0	1/1:10,0:10:18.05:639,18,0	1/1:15,0:15:5.41:725,5,0	1/1:14,1:15:30.08:1345,30,0	0/1:6,0:6:17.77:447,0,18	0/1:26,0:27:99:435,0,135	0/1:14,0:14:34.61:56,0,35	1/1:16,0:15:34.67:667,35,0	1/1:11,0:11:21.01:923,21,0	1/1:8,0:7:0.41:268,0,0	0/1:12,0:12:56.54:558,0,57	1/1:18,1:19:16.21:1164,16,0	0/1:8,0:7:4.22:167,0,4	1/1:24,0:24:23.65:1569,24,0	1/1:16,0:16:1.42:1149,1,0	1/1:16,0:16:27.30:763,27,0	1/1:6,0:6:9.50:323,10,0
chr10	29557097	.	GT	G	12633.99	PASS	AB=0.964;AC=52;AF=0.929;AN=56;BaseQRankSum=1.206;DP=652;FS=23.401;HRun=10;HaplotypeScore=68.6130;InbreedingCoeff=0.5897;MQ=76.76;MQ0=0;MQRankSum=-3.711;QD=20.05;ReadPosRankSum=3.988;VQSLOD=3.8826;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,27:32:66.13:685,66,0	1/1:1,5:6:11.99:104,12,0	0/1:24,2:24:22.16:22,0,368	0/1:12,0:12:2.10:2,0,146	1/1:3,28:31:77.63:661,78,0	1/1:4,24:28:68.98:599,69,0	1/1:3,16:19:32.98:287,33,0	1/1:5,21:26:62.96:547,63,0	0/0:22,0:22:63.16:0,63,689	1/1:3,31:34:90.83:793,91,0	1/1:5,20:25:35.52:470,36,0	1/1:1,19:20:50.99:442,51,0	1/1:2,22:24:62.99:547,63,0	1/1:2,16:18:44.98:391,45,0	1/1:1,23:24:68.98:599,69,0	1/1:3,26:29:68.96:599,69,0	1/1:1,24:24:71.99:625,72,0	1/1:0,19:19:50.99:443,51,0	1/1:7,16:23:20.78:409,21,0	1/1:2,24:27:74.01:631,74,0	1/1:2,15:17:41.99:365,42,0	1/1:4,21:25:56.97:495,57,0	1/1:0,22:22:62.99:547,63,0	1/1:1,13:14:32.99:287,33,0	1/1:3,19:23:53.02:449,53,0	1/1:5,26:31:74.95:647,75,0	1/1:0,31:31:86.98:755,87,0	1/1:5,14:19:26.99:234,27,0
chr10	29557978	.	TAA	T	9220.64	PASS	AB=1.000;AC=51;AF=0.911;AN=56;BaseQRankSum=-3.653;DP=593;FS=7.043;HRun=15;HaplotypeScore=107.9900;InbreedingCoeff=0.6826;MQ=68.32;MQ0=1;MQRankSum=-0.870;QD=16.80;ReadPosRankSum=4.133;VQSLOD=3.8658;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:11,0:11:36.78:37,0,51	1/1:1,10:11:26.98:238,27,0	0/0:25,0:15:17.64:0,18,140	0/0:17,0:11:12.66:0,13,93	1/1:8,23:32:62.44:574,62,0	1/1:5,13:20:47.39:388,47,0	1/1:4,21:25:53.89:476,54,0	1/1:11,9:22:16.88:183,17,0	1/1:1,18:23:63.52:501,64,0	1/1:4,10:15:29.65:249,30,0	1/1:5,18:24:50.66:434,51,0	1/1:2,12:14:29.96:264,30,0	1/1:3,16:22:29.52:396,30,0	1/1:2,16:22:30.82:346,31,0	1/1:3,19:25:35.64:406,36,0	1/1:6,19:27:50.53:424,51,0	1/1:5,23:30:59.41:499,59,0	1/1:5,12:20:29.22:279,29,0	1/1:9,16:26:44.39:419,44,0	1/1:5,18:24:36.51:363,37,0	1/1:3,11:16:32.45:261,32,0	1/1:0,17:18:47.65:407,48,0	1/1:4,11:20:16.87:261,17,0	1/1:0,14:14:38.99:344,39,0	1/1:6,22:28:28.15:515,28,0	1/1:5,15:21:32.50:331,32,0	1/1:5,22:28:50.43:479,50,0	1/1:1,8:10:1.15:148,1,0
chr10	29558278	.	T	TA	639.75	PASS	AB=1.000;AC=16;AF=0.286;AN=56;BaseQRankSum=12.023;DP=565;FS=14.148;HRun=8;HaplotypeScore=162.2721;InbreedingCoeff=-0.2113;MQ=66.54;MQ0=0;MQRankSum=-4.984;QD=2.12;ReadPosRankSum=-2.945;VQSLOD=-0.5910;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:77.08:0,77,712	0/0:11,0:11:20.90:0,21,176	0/0:19,0:20:43.96:0,44,373	0/0:12,0:12:26.72:0,27,225	0/0:42,0:41:21.06:0,21,491	0/0:19,0:19:5.44:0,5,253	0/1:20,0:20:16.09:16,0,279	0/1:10,0:10:0.46:0,0,183	1/1:4,17:21:48.14:554,48,0	0/1:25,0:25:59.63:60,0,367	0/0:23,0:23:8.30:0,8,250	0/1:25,0:25:7.98:8,0,347	0/0:14,0:14:12.91:0,13,249	0/0:19,0:19:8.15:0,8,295	0/1:23,0:23:13.28:13,0,178	0/1:17,0:17:4.44:4,0,207	0/0:15,0:15:20.68:0,21,213	0/0:8,0:8:5.99:0,6,55	0/1:12,0:11:16.07:16,0,137	0/1:35,0:35:33.85:34,0,424	0/1:8,0:8:8.63:9,0,82	0/0:24,0:24:0.17:0,0,304	0/0:24,0:24:9.70:0,10,365	0/1:11,0:11:33.10:33,0,38	0/1:26,0:26:10.20:10,0,392	0/1:31,0:30:21.45:21,0,375	0/1:22,0:22:5.10:5,0,314	0/1:16,0:16:4.60:5,0,235
chr10	29558295	.	GCCA	G	68.55	PASS	AB=0.890;AC=8;AF=0.143;AN=56;BaseQRankSum=2.406;DP=359;FS=0.000;HRun=0;HaplotypeScore=60.2968;InbreedingCoeff=0.0285;MQ=72.18;MQ0=0;MQRankSum=-0.584;QD=0.87;ReadPosRankSum=-4.325;VQSLOD=-0.4360;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,108,2606	0/0:7,0:7:21.03:0,21,459	0/0:19,0:19:54.19:0,54,1263	0/0:17,1:18:33.82:0,34,1127	0/1:13,4:16:33.52:34,0,419	0/1:12,0:12:8.84:9,0,687	0/0:10,0:10:30.10:0,30,737	0/1:10,2:12:59.08:59,0,632	0/0:19,0:19:54.19:0,54,1330	0/0:18,0:18:42.14:0,42,1021	0/1:8,2:10:33.57:34,0,422	0/0:11,0:11:33.11:0,33,797	0/0:9,0:9:27.09:0,27,665	0/0:11,0:11:30.10:0,30,711	0/0:21,0:21:31.18:0,31,1125	0/0:10,0:10:27.09:0,27,646	1/1:3,1:4:2.67:25,3,0	0/0:8,0:8:24.08:0,24,591	0/0:12,0:11:6.15:0,6,669	0/0:12,0:12:8.14:0,8,713	0/0:10,0:10:24.08:0,24,591	0/1:9,1:10:30.47:30,0,351	0/0:9,0:9:21.07:0,21,513	0/0:5,0:5:6.02:0,6,149	0/0:10,0:10:27.09:0,27,664	0/0:13,0:12:27.09:0,27,651	0/1:13,1:14:5.12:5,0,911	0/0:11,0:11:27.09:0,27,659
chr10	29559124	.	AGCCTGAAGGAGGCAGCCAC	A	2058.58	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.200;DP=619;FS=3.712;HRun=0;HaplotypeScore=300.8780;InbreedingCoeff=0.9952;MQ=77.42;MQ0=0;MQRankSum=-6.362;QD=93.57;ReadPosRankSum=2.617;VQSLOD=2.5931;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,117,9769	0/0:9,0:9:24.08:0,24,1972	0/0:17,0:17:45.02:0,45,2658	0/0:12,0:12:30.10:0,30,1863	0/0:16,0:16:48.15:0,48,3894	0/0:23,0:23:69.24:0,69,5857	0/0:36,0:36:99:0,102,7572	0/0:24,0:24:72.24:0,72,4914	1/1:5,17:22:42.14:2153,42,0	0/0:9,0:9:27.09:0,27,2268	0/0:16,0:16:39.13:0,39,2904	0/0:39,0:39:99:0,117,9930	0/0:14,0:14:39.12:0,39,2823	0/0:25,0:25:75.26:0,75,6145	0/0:27,0:27:78.27:0,78,6660	0/0:22,0:22:63.22:0,63,5310	0/0:40,0:39:99:0,120,9495	0/0:27,0:27:81.22:0,81,6125	0/0:25,0:25:69.24:0,69,4628	0/0:15,0:15:36.12:0,36,2817	0/0:42,0:42:99:0,120,8952	0/0:12,0:12:33.11:0,33,2563	0/0:12,0:12:33.11:0,33,2697	0/0:21,0:21:60.21:0,60,4961	0/0:19,0:19:57.20:0,57,4303	0/0:21,0:21:54.19:0,54,4619	0/0:23,0:23:69.24:0,69,5386	0/0:10,0:10:30.10:0,30,2615
chr10	29560490	.	A	AT	458.97	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-5.501;DP=573;FS=2.053;HRun=8;HaplotypeScore=54.0159;InbreedingCoeff=0.9800;MQ=78.49;MQ0=0;MQRankSum=-1.656;QD=22.95;ReadPosRankSum=2.355;VQSLOD=4.2146;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,19:20:48.06:554,48,0	0/0:7,0:7:15:0,15,137	0/0:17,0:17:21.54:0,22,298	0/0:17,0:17:35.92:0,36,312	0/0:26,0:26:68.97:0,69,618	0/0:19,0:19:51:0,51,462	0/0:22,0:22:60.03:0,60,549	0/0:28,0:28:71.99:0,72,643	0/0:19,0:19:51.02:0,51,467	0/0:17,0:17:48.02:0,48,439	0/0:16,0:16:48.03:0,48,439	0/0:25,0:25:72.04:0,72,659	0/0:17,0:17:39.01:0,39,357	0/0:18,0:18:48.02:0,48,439	0/0:20,0:20:54.01:0,54,489	0/0:14,0:14:42.02:0,42,384	0/0:31,0:31:84:0,84,759	0/0:23,0:23:59.99:0,60,538	0/0:20,0:20:45.01:0,45,412	0/0:34,0:34:87.01:0,87,788	0/0:15,0:15:45.02:0,45,408	0/0:16,0:16:48.01:0,48,434	0/0:28,0:28:68.95:0,69,614	0/0:20,0:20:51.02:0,51,467	0/0:23,0:23:57.02:0,57,518	0/0:21,0:21:57.01:0,57,513	0/0:30,0:29:84.03:0,84,763	0/0:10,0:10:30.02:0,30,275
chr10	29561821	.	G	GTTT	210.13	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-1.786;DP=406;FS=7.579;HRun=0;HaplotypeScore=141.0718;InbreedingCoeff=0.7333;MQ=74.64;MQ0=1;MQRankSum=-1.912;QD=12.36;ReadPosRankSum=-1.827;VQSLOD=2.3402;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,7:17:9.92:294,10,0	0/0:9,0:9:27.09:0,27,471	0/0:19,0:17:44.51:0,45,619	0/0:23,0:18:35.45:0,35,453	0/0:25,0:26:72.07:0,72,1067	0/0:17,0:18:48.07:0,48,703	0/0:15,0:15:45.14:0,45,732	0/0:24,0:24:68.04:0,68,1124	0/0:13,0:13:39.13:0,39,573	0/0:19,0:21:60.14:0,60,898	0/0:21,0:20:60.20:0,60,938	0/0:17,0:17:46.03:0,46,739	0/0:11,0:12:36.11:0,36,539	0/0:10,0:10:30.10:0,30,479	0/0:20,0:20:60.09:0,60,949	0/0:9,0:9:24.06:0,24,380	0/0:14,0:13:36.12:0,36,567	0/0:6,0:6:18.06:0,18,305	0/0:16,0:16:40.76:0,41,709	0/0:10,0:11:33:0,33,497	0/0:4,0:3:9.03:0,9,149	0/0:14,0:14:42.14:0,42,694	0/0:13,0:13:26.93:0,27,428	0/0:4,0:4:12.04:0,12,214	0/0:17,0:17:48.16:0,48,771	0/0:14,0:14:42.13:0,42,690	0/0:18,0:18:51.17:0,51,850	0/0:1,0:1:3.01:0,3,39
chr10	29561822	.	GTT	G	8340.96	PASS	AB=0.667;AC=47;AF=0.839;AN=56;BaseQRankSum=-3.406;DP=406;FS=38.187;HRun=11;HaplotypeScore=103.0911;InbreedingCoeff=0.7798;MQ=75.66;MQ0=1;MQRankSum=-2.419;QD=24.11;ReadPosRankSum=5.089;VQSLOD=1.9073;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:39.38:0,39,455	1/1:0,9:9:27.07:287,27,0	0/0:17,0:17:27.44:0,27,314	0/0:24,0:19:22.98:0,23,328	1/1:5,21:26:57.10:603,57,0	1/1:6,12:18:33.06:351,33,0	1/1:2,13:15:39.07:415,39,0	1/1:1,22:24:57.07:651,57,0	1/1:3,10:13:30.06:318,30,0	1/1:6,15:21:51.07:526,51,0	1/1:3,18:20:45.09:478,45,0	1/1:3,14:17:39.04:415,39,0	1/1:4,8:12:27.04:287,27,0	1/1:3,7:10:21.03:223,21,0	1/1:3,17:20:51.10:543,51,0	1/1:2,7:9:18.04:192,18,0	1/1:2,12:13:30.06:319,30,0	1/1:0,6:6:18.05:192,18,0	0/1:8,8:16:44.81:225,0,45	1/1:4,6:11:14.94:207,15,0	1/1:1,4:4:12.03:125,12,0	1/1:2,12:14:36.08:383,36,0	1/1:1,12:13:24.02:255,24,0	1/1:0,4:4:12.03:128,12,0	1/1:3,14:17:39.08:415,39,0	1/1:3,10:13:30.04:312,30,0	1/1:1,16:18:47.85:491,48,0	0/0:1,0:1:0:0,0,0
chr10	29561863	.	GACA	G	395.51	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=1.551;DP=566;FS=2.930;HRun=0;HaplotypeScore=162.8855;InbreedingCoeff=0.9041;MQ=84.81;MQ0=5;MQRankSum=-3.521;QD=21.97;ReadPosRankSum=1.629;VQSLOD=3.8631;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:57.19:0,57,1084	0/0:11,0:11:33.11:0,33,737	0/0:41,0:31:80.71:0,81,1590	0/0:34,0:26:60.21:0,60,1245	0/0:22,0:22:57.19:0,57,1146	0/0:17,0:17:45.15:0,45,944	0/0:24,0:24:69.23:0,69,1414	0/0:18,0:18:51.17:0,51,1110	1/1:2,16:18:30.10:490,30,0	0/0:26,0:26:75.21:0,75,1608	0/0:24,0:24:66.23:0,66,1430	0/0:31,0:31:90.14:0,90,1817	0/0:18,0:18:51.18:0,51,1138	0/0:17,0:17:51.12:0,51,1002	0/0:28,0:28:84.28:0,84,1619	0/0:17,0:17:48.16:0,48,1022	0/0:14,0:13:34.36:0,34,710	0/0:12,0:12:33.11:0,33,715	0/0:18,0:18:54.18:0,54,1138	0/0:17,0:17:51.17:0,51,1049	0/0:15,0:15:36.12:0,36,709	0/0:19,0:19:57.19:0,57,1075	0/0:20,0:20:51.17:0,51,1003	0/0:19,0:19:48.16:0,48,1032	0/0:19,0:19:51.17:0,51,1071	0/0:15,0:15:45.15:0,45,993	0/0:22,0:21:66.23:0,66,1442	0/0:2,0:2:6.02:0,6,134
chr10	29561879	.	G	GTGA	7310.98	PASS	AB=0.786;AC=38;AF=0.864;AN=44;BaseQRankSum=-3.241;DP=691;FS=4.235;HRun=0;HaplotypeScore=155.7872;InbreedingCoeff=0.4312;MQ=70.00;MQ0=31;MQRankSum=-0.059;QD=16.14;ReadPosRankSum=-1.239;VQSLOD=4.1338;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:32:5.57:0,6,31	1/1:8,2:10:6.02:112,6,0	./.	./.	1/1:19,2:21:9.03:159,9,0	1/1:17,4:21:18.06:332,18,0	1/1:25,1:26:12.02:180,12,0	./.	1/1:16,5:21:20.74:379,21,0	1/1:31,4:33:18.06:336,18,0	./.	1/1:29,7:36:32.86:526,33,0	1/1:12,11:23:45.15:819,45,0	1/1:12,6:18:27.08:465,27,0	1/1:22,11:33:1.02:634,1,0	1/1:10,10:20:36.12:662,36,0	./.	./.	1/1:19,2:18:6.02:112,6,0	0/1:18,2:21:2.93:214,0,3	0/1:13,13:26:68.78:416,0,69	1/1:22,2:24:6.02:112,6,0	1/1:17,3:20:15.05:272,15,0	1/1:10,12:23:23.93:449,24,0	0/0:18,0:19:18.01:0,18,199	1/1:15,3:18:11.97:186,12,0	1/1:21,7:27:39.12:684,39,0	1/1:4,3:7:15.05:262,15,0
chr10	29562249	.	AAC	A	2261.38	PASS	AB=0.901;AC=36;AF=0.750;AN=48;BaseQRankSum=1.835;DP=617;FS=5.420;HRun=0;HaplotypeScore=126.6304;InbreedingCoeff=0.2547;MQ=66.12;MQ0=10;MQRankSum=-0.490;QD=5.06;ReadPosRankSum=2.364;VQSLOD=2.8987;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:43:14.06:0,14,159	1/1:3,4:7:6.02:65,6,0	./.	./.	1/1:13,2:17:9.33:80,9,0	1/1:10,5:15:12.03:130,12,0	1/1:26,6:33:22.89:210,23,0	./.	0/1:16,0:26:0:0,0,0	0/1:16,3:18:17.41:56,0,17	0/0:9,0:11:6.02:0,6,85	0/1:10,6:17:17.63:215,0,18	1/1:8,6:15:11.86:111,12,0	1/1:19,9:28:9.03:272,9,0	1/1:11,12:25:20.48:186,20,0	0/0:14,0:14:9.01:0,9,106	1/1:17,0:16:4.48:21,4,0	0/1:20,0:20:6.55:7,0,19	1/1:13,0:15:4.88:20,5,0	1/1:8,3:12:6.01:65,6,0	1/1:42,13:58:29.58:268,30,0	0/1:23,0:24:34.78:39,0,35	./.	1/1:28,3:31:30.08:324,30,0	1/1:12,4:16:6.01:65,6,0	0/1:19,1:21:35.09:52,0,35	1/1:12,4:18:20.03:189,20,0	1/1:7,1:8:3.01:33,3,0
chr10	29562926	.	ATGAG	A	3926.28	PASS	AB=0.994;AC=28;AF=0.500;AN=56;BaseQRankSum=-13.502;DP=530;FS=3.365;HRun=0;HaplotypeScore=117.6034;InbreedingCoeff=-0.7302;MQ=72.41;MQ0=4;MQRankSum=0.592;QD=8.06;ReadPosRankSum=-0.044;VQSLOD=2.8247;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:23:10.13:122,0,10	0/1:4,0:4:36.89:37,0,81	0/0:21,0:16:10.82:0,11,261	0/0:21,0:13:16.76:0,17,195	0/1:26,0:26:99:264,0,229	1/1:19,2:21:5.63:111,6,0	0/1:17,1:18:99:243,0,173	1/1:24,0:24:62.95:542,63,0	0/1:17,0:17:79.25:79,0,290	0/1:20,1:21:99:289,0,143	0/1:15,0:15:99:134,0,211	0/1:11,0:11:97.24:97,0,159	0/1:20,0:19:96.65:97,0,316	0/1:7,0:7:56.36:56,0,122	0/1:18,1:18:87.68:88,0,420	0/1:19,0:19:99:108,0,304	0/1:22,0:22:71.43:101,0,71	0/1:26,0:26:99:121,0,283	0/1:16,0:16:63.18:154,0,63	0/1:24,0:24:99:158,0,466	0/1:17,0:17:99:159,0,184	0/1:14,0:15:66.78:67,0,180	0/1:19,0:19:57.57:58,0,409	0/1:26,0:26:99:122,0,411	0/1:22,0:22:99:149,0,263	0/1:24,0:24:99:287,0,216	0/1:19,0:19:99:169,0,222	0/1:11,0:10:99:115,0,114
chr10	29562929	.	A	AGTGTGT	1778.91	PASS	AB=0.992;AC=21;AF=0.375;AN=56;BaseQRankSum=-6.826;DP=536;FS=4.703;HRun=0;HaplotypeScore=157.3375;InbreedingCoeff=-0.1871;MQ=69.39;MQ0=5;MQRankSum=-1.680;QD=5.14;ReadPosRankSum=-6.122;VQSLOD=-0.0173;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:15,0:19:26.59:60,0,27	0/1:4,0:4:36.89:37,0,77	0/0:18,0:13:25.20:0,25,458	0/0:22,0:13:23.77:0,24,243	0/1:23,0:23:52.66:53,0,198	0/0:22,0:22:27.08:0,27,332	0/1:18,0:19:31.86:32,0,251	0/1:24,0:24:30.60:39,0,31	0/0:17,0:17:3.79:0,4,275	0/1:24,0:24:16.17:16,0,132	0/1:14,0:14:31.51:32,0,145	0/1:12,0:12:8.15:8,0,195	0/0:20,0:19:14.52:0,15,420	0/0:7,0:7:12.04:0,12,166	0/0:18,0:18:22.82:0,23,477	0/0:19,0:19:5.54:0,6,371	1/1:8,13:24:8:303,8,0	1/1:24,2:27:40.27:636,40,0	0/1:14,0:15:16.30:173,0,16	0/1:23,0:23:9.02:9,0,394	0/1:20,0:19:63.63:64,0,87	1/1:8,0:15:22.31:334,22,0	0/1:20,0:20:29.42:29,0,388	0/0:26,0:26:4.91:0,5,380	0/1:24,0:24:47.83:48,0,206	0/1:27,0:27:51.55:52,0,243	0/0:20,0:20:19.01:0,19,260	0/1:11,0:10:25.90:26,0,152
chr10	29562931	.	TGA	T	5736.23	PASS	AB=0.956;AC=31;AF=0.554;AN=56;BaseQRankSum=-12.186;DP=546;FS=3.982;HRun=0;HaplotypeScore=97.4430;InbreedingCoeff=-0.5159;MQ=65.35;MQ0=5;MQRankSum=-0.023;QD=11.25;ReadPosRankSum=-3.599;VQSLOD=4.0034;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:18:17.56:131,18,0	0/1:6,0:6:26.11:58,0,26	0/0:16,0:11:10.82:0,11,261	0/0:20,0:10:16.62:0,17,172	0/1:25,0:25:68:286,0,68	1/1:3,20:23:27.02:361,27,0	0/1:19,1:20:38.43:276,0,38	1/1:0,23:23:65.99:587,66,0	0/1:17,0:17:98:98,0,127	0/1:24,0:24:11.24:335,0,11	0/1:15,0:15:59.52:159,0,60	0/1:11,1:12:51.79:139,0,52	0/1:17,4:20:79.18:276,0,79	0/1:7,1:8:37.28:119,0,37	0/1:20,1:20:99:121,0,156	0/1:19,1:20:94.82:176,0,95	1/1:24,0:24:3.56:107,4,0	0/1:23,0:23:16.12:165,0,16	1/1:16,0:16:11.82:215,12,0	0/1:25,2:27:99:314,0,134	0/1:21,0:20:21.13:228,0,21	0/1:16,0:16:0.97:124,0,1	0/1:18,2:20:99:175,0,116	0/1:26,1:27:99:129,0,139	0/1:23,1:24:34.65:298,0,35	0/1:25,2:27:39.90:440,0,40	0/1:19,1:20:49.98:261,0,50	0/1:10,1:10:32.36:157,0,32
chr10	29563226	.	CTT	C	13929.06	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-10.091;DP=621;FS=14.506;HRun=9;HaplotypeScore=95.0444;InbreedingCoeff=0.9911;MQ=85.70;MQ0=3;MQRankSum=-5.048;QD=27.10;ReadPosRankSum=7.697;VQSLOD=2.8523;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,29:36:78.22:908,78,0	1/1:2,8:10:24.07:280,24,0	0/0:49,0:37:77.48:0,77,890	0/0:39,0:29:61.19:0,61,803	1/1:5,39:44:99:1212,105,0	1/1:0,17:17:45.13:524,45,0	1/1:1,22:23:45.13:524,45,0	1/1:5,23:28:69.18:791,69,0	0/0:2,0:18:37.93:0,38,148	1/1:2,19:21:60.18:697,60,0	1/1:2,17:19:45.12:522,45,0	1/1:0,11:11:33.10:384,33,0	1/1:3,15:18:36.11:419,36,0	1/1:4,15:19:36.10:419,36,0	1/1:2,14:16:27.08:315,27,0	1/1:1,14:15:39.11:454,39,0	1/1:5,29:34:75.21:874,75,0	1/1:3,16:19:45.13:522,45,0	1/1:0,13:13:39.12:454,39,0	1/1:3,26:29:75.21:867,75,0	1/1:0,9:9:21.06:245,21,0	1/1:1,12:13:27.07:314,27,0	1/1:1,21:22:48.14:559,48,0	1/1:1,14:15:36.11:419,36,0	1/1:2,32:32:78.23:909,78,0	1/1:2,14:16:42.10:477,42,0	1/1:2,22:24:57.16:663,57,0	1/1:4,5:9:15.04:175,15,0
chr10	29563854	.	G	GAAAA	14240.56	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-5.051;DP=485;FS=7.526;HRun=10;HaplotypeScore=101.2186;InbreedingCoeff=0.7837;MQ=82.18;MQ0=1;MQRankSum=-6.392;QD=34.99;ReadPosRankSum=0.211;VQSLOD=3.3746;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,0:16:18.06:338,18,0	1/1:1,4:6:3.48:71,3,0	0/0:45,0:33:29:0,29,598	0/0:32,0:26:10.88:0,11,341	1/1:7,13:21:45.11:857,45,0	1/1:4,18:25:54.18:1190,54,0	1/1:2,7:12:33.03:624,33,0	1/1:10,10:22:42.06:803,42,0	1/1:7,1:11:18.06:351,18,0	1/1:7,12:21:45.15:971,45,0	1/1:10,6:21:29.86:608,30,0	1/1:2,6:12:33.03:621,33,0	1/1:2,9:14:26.60:518,27,0	1/1:2,10:15:14.40:384,14,0	1/1:6,11:21:36.04:744,36,0	1/1:4,11:16:33.09:713,33,0	1/1:14,0:17:22.55:294,23,0	1/1:4,0:18:12.04:229,12,0	1/1:10,7:18:30.08:609,30,0	1/1:8,1:14:20.19:246,20,0	1/1:3,8:12:24.08:566,24,0	1/1:7,6:15:21.41:362,21,0	1/1:7,8:15:27.09:617,27,0	1/1:3,3:7:6.02:108,6,0	1/1:3,8:12:25.64:534,26,0	1/1:3,10:16:41.27:816,41,0	1/1:9,14:25:45.15:924,45,0	1/1:2,2:4:6.02:141,6,0
chr10	29563994	.	CA	C	4127.69	PASS	AC=44;AF=0.815;AN=54;BaseQRankSum=6.480;DP=325;FS=6.414;HRun=3;HaplotypeScore=89.5180;InbreedingCoeff=0.8504;MQ=73.50;MQ0=1;MQRankSum=-2.440;QD=18.10;ReadPosRankSum=1.951;VQSLOD=3.0983;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:63.21:0,63,989	./.	0/0:15,0:10:0.10:0,0,249	0/0:12,0:9:13.83:0,14,198	1/1:3,6:9:17.87:132,18,0	1/1:3,15:17:50.76:408,51,0	1/1:3,18:21:47.77:382,48,0	1/1:6,6:8:14.17:83,14,0	1/1:3,7:10:23.33:183,23,0	1/1:0,3:3:8.99:76,9,0	1/1:0,4:6:5.96:44,6,0	1/1:1,8:9:25.73:204,26,0	1/1:2,5:7:20.82:155,21,0	1/1:4,9:12:30.03:238,30,0	1/1:2,6:8:17.88:136,18,0	1/1:2,8:10:26.32:219,26,0	0/0:28,0:28:78.23:0,78,1111	0/0:16,0:15:45.09:0,45,578	1/1:3,9:12:32.38:252,32,0	1/1:0,5:8:14.73:104,15,0	1/1:5,14:19:25.46:279,25,0	1/1:0,2:2:6:53,6,0	1/1:0,6:6:14.90:122,15,0	1/1:2,17:19:27.86:310,28,0	1/1:0,7:7:17.92:149,18,0	1/1:0,10:13:32.68:260,33,0	1/1:3,5:8:20.75:150,21,0	1/1:0,8:8:23.94:191,24,0
chr10	29563999	.	GT	G	4628.21	PASS	AB=1.000;AC=48;AF=0.889;AN=54;BaseQRankSum=4.874;DP=350;FS=0.000;HRun=1;HaplotypeScore=87.0037;InbreedingCoeff=0.6265;MQ=65.82;MQ0=8;MQRankSum=-2.219;QD=15.38;ReadPosRankSum=2.642;VQSLOD=4.7657;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:59.80:0,60,501	./.	0/0:18,0:8:16.82:0,17,170	0/1:13,0:8:2.30:2,0,104	1/1:3,6:9:15.01:133,15,0	1/1:4,15:17:44.96:398,45,0	1/1:0,22:22:50.98:458,51,0	1/1:8,6:8:11.77:91,12,0	1/1:3,7:10:24:213,24,0	1/1:1,3:4:11.98:98,12,0	1/1:4,4:8:5.98:50,6,0	1/1:3,8:11:29.89:255,30,0	1/1:4,5:9:17.21:150,17,0	1/1:5,9:13:35.92:304,36,0	1/1:3,6:9:14.99:132,15,0	1/1:4,8:11:26.96:243,27,0	0/1:27,0:26:10.70:11,0,86	1/1:16,0:15:18.22:60,18,0	1/1:2,9:11:32.84:277,33,0	1/1:6,5:10:11.97:98,12,0	1/1:2,13:15:30.03:284,30,0	1/1:1,2:2:6:54,6,0	1/1:1,6:7:14.99:129,15,0	1/1:3,17:20:39.01:359,39,0	1/1:0,7:7:18.01:166,18,0	1/1:5,10:14:32.98:296,33,0	1/1:2,5:7:17.90:148,18,0	1/1:0,8:8:24.02:218,24,0
chr10	29564000	.	TG	T	1357.74	PASS	AB=1.000;AC=47;AF=0.870;AN=54;BaseQRankSum=5.098;DP=369;FS=0.790;HRun=10;HaplotypeScore=99.3165;InbreedingCoeff=0.4876;MQ=64.07;MQ0=19;MQRankSum=-0.737;QD=4.24;ReadPosRankSum=2.135;VQSLOD=1.1416;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:29:53.83:0,54,229	./.	0/0:18,0:8:6.01:0,6,63	0/1:13,0:8:2.62:3,0,42	1/1:11,0:10:4.61:13,5,0	1/1:19,0:17:23.05:65,23,0	1/1:25,0:25:30.04:92,30,0	1/1:16,0:10:1.55:5,2,0	1/1:10,0:10:12.19:34,12,0	1/1:4,0:4:5.11:18,5,0	0/1:9,0:8:3.33:3,0,12	1/1:12,0:11:13.09:37,13,0	0/1:9,0:9:1.33:11,0,1	1/1:15,0:13:15.34:43,15,0	1/1:9,0:9:8.30:23,8,0	1/1:13,0:11:15.60:53,16,0	1/1:9,18:26:44.95:391,45,0	1/1:2,14:15:41.89:355,42,0	1/1:12,0:12:15.22:40,15,0	1/1:11,0:10:5.45:15,5,0	1/1:16,0:15:17.65:48,18,0	1/1:3,0:2:2.29:6,2,0	1/1:8,0:8:10.89:43,11,0	1/1:21,0:21:20.97:58,21,0	1/1:8,0:7:10.12:28,10,0	1/1:15,0:14:18.34:49,18,0	1/1:8,0:7:7.94:22,8,0	1/1:9,0:8:12.70:36,13,0
chr10	29564005	.	G	GT	698.42	PASS	AC=2;AF=0.037;AN=54;BaseQRankSum=-7.254;DP=403;FS=3.093;HRun=0;HaplotypeScore=101.8960;InbreedingCoeff=0.6807;MQ=60.10;MQ0=32;MQRankSum=0.802;QD=19.95;ReadPosRankSum=0.602;VQSLOD=5.3798;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,31:34:45.31:793,45,0	./.	0/0:17,0:7:13.95:0,14,146	0/0:12,0:7:6.69:0,7,53	0/0:12,0:11:14.98:0,15,130	0/0:19,0:16:38.96:0,39,341	0/0:26,0:25:53.81:0,54,439	0/0:19,0:11:27.28:0,27,203	0/0:10,0:10:20.98:0,21,182	0/0:4,0:4:11.96:0,12,94	0/0:8,0:7:8.83:0,9,61	0/0:13,0:12:27.51:0,28,224	0/0:12,0:10:15.89:0,16,138	0/0:16,0:14:35.79:0,36,290	0/0:9,0:9:14.98:0,15,131	0/0:14,0:11:24:0,24,220	0/0:27,0:26:56.26:0,56,377	0/0:19,0:16:41.42:0,41,274	0/0:12,0:12:35.73:0,36,283	0/0:10,0:9:8.97:0,9,72	0/0:23,0:16:30.01:0,30,273	0/0:4,0:3:6.01:0,6,55	0/0:9,0:8:14.93:0,15,117	0/0:24,0:24:41.95:0,42,369	0/0:11,0:9:18.01:0,18,166	0/0:14,0:13:34.47:0,34,282	0/0:11,0:10:20.88:0,21,163	0/0:10,0:8:24.03:0,24,225
chr10	29564410	.	T	TAA	12919.23	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-7.724;DP=488;FS=9.853;HRun=10;HaplotypeScore=55.4252;InbreedingCoeff=0.9134;MQ=69.78;MQ0=6;MQRankSum=-0.516;QD=30.19;ReadPosRankSum=1.965;VQSLOD=4.3970;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,0:25:10.16:101,10,0	1/1:0,3:3:9.03:134,9,0	0/0:9,0:9:18.04:0,18,167	0/0:5,0:5:2.94:0,3,30	1/1:2,15:17:39.10:555,39,0	1/1:1,14:15:39.13:581,39,0	1/1:1,22:25:60.20:893,60,0	1/1:5,26:31:75.25:1114,75,0	1/1:4,0:16:27.45:97,27,0	1/1:1,21:24:62.66:860,63,0	1/1:2,13:16:38.62:545,39,0	1/1:2,15:18:36.12:520,36,0	1/1:2,14:15:33.07:464,33,0	1/1:1,8:8:18.06:268,18,0	1/1:4,19:23:51.17:761,51,0	1/1:2,16:19:38.87:581,39,0	0/0:30,0:30:72.13:0,72,724	0/0:15,0:15:36.05:0,36,365	1/1:7,10:18:34.15:451,34,0	1/1:3,8:13:29.58:395,30,0	1/1:3,16:18:39.13:581,39,0	1/1:2,8:10:27.09:394,27,0	1/1:2,15:17:39.56:557,40,0	1/1:2,14:18:41.11:554,41,0	1/1:2,7:11:23.56:306,24,0	1/1:4,21:26:60.20:890,60,0	1/1:3,27:29:69.20:1003,69,0	1/1:0,8:8:21.07:313,21,0
chr10	29564709	.	TGC	T	4052.23	PASS	AB=0.946;AC=35;AF=0.625;AN=56;BaseQRankSum=-5.933;DP=450;FS=2.086;HRun=0;HaplotypeScore=121.8613;InbreedingCoeff=-0.3445;MQ=60.17;MQ0=4;MQRankSum=0.133;QD=9.96;ReadPosRankSum=0.585;VQSLOD=3.5762;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:19,0:19:8.36:8,0,29	0/1:4,1:5:36.74:43,0,37	0/0:20,0:9:20.69:0,21,258	0/0:23,0:11:31.97:0,32,397	0/1:19,1:20:60.72:216,0,61	1/1:0,19:20:8.94:103,9,0	0/1:15,1:16:25.72:176,0,26	1/1:32,0:32:42.41:477,42,0	1/1:4,0:7:12.26:78,12,0	1/1:15,1:16:5.64:253,6,0	0/1:20,2:22:10.71:244,0,11	0/1:23,2:24:86.58:211,0,87	1/1:15,0:15:9.39:191,9,0	0/1:10,0:10:26.68:64,0,27	0/1:20,1:21:59.83:191,0,60	0/1:16,0:16:56.75:180,0,57	1/1:11,0:11:1.08:7,1,0	1/1:8,0:8:1.82:5,2,0	1/1:6,2:8:20.98:191,21,0	0/1:16,2:18:39.22:219,0,39	0/1:15,0:15:12.64:122,0,13	0/1:5,0:5:22.37:22,0,48	0/1:9,1:10:14.18:139,0,14	0/1:17,1:18:59.17:59,0,104	0/1:16,2:18:36:201,0,36	0/1:18,0:18:42.53:216,0,43	0/1:23,3:26:99:293,0,113	1/1:8,0:8:3.35:144,3,0
chr10	29564711	.	CGTGCGTGT	C	2063.72	PASS	AB=1.000;AC=28;AF=0.500;AN=56;BaseQRankSum=-5.327;DP=446;FS=24.000;HRun=0;HaplotypeScore=168.0539;InbreedingCoeff=-0.4910;MQ=57.68;MQ0=5;MQRankSum=1.249;QD=5.29;ReadPosRankSum=3.723;VQSLOD=1.2736;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:2,15:18:6.49:149,6,0	0/1:5,0:5:13.03:13,0,211	0/0:18,0:7:7.87:0,8,101	0/0:23,0:11:7.62:0,8,268	0/1:19,0:19:99:122,0,516	0/1:20,0:20:2.01:2,0,98	0/1:14,0:14:68.74:69,0,424	0/1:35,0:35:99:344,0,618	1/1:6,0:6:12.03:197,12,0	0/1:16,0:16:92.27:92,0,600	0/1:23,0:23:32.94:33,0,759	0/1:25,0:23:98.69:99,0,914	0/1:15,0:15:99:113,0,405	0/1:11,0:11:28.35:28,0,398	0/1:19,0:19:72.56:73,0,960	0/1:16,0:16:99:111,0,577	1/1:8,2:10:11.74:134,12,0	1/1:1,7:8:3.01:84,3,0	0/1:7,0:7:54.86:55,0,69	0/1:18,0:18:81.70:82,0,534	0/1:15,0:15:41.23:41,0,457	0/0:5,0:5:15.05:0,15,449	0/0:10,0:10:2.12:0,2,564	0/1:19,0:19:14.91:15,0,740	0/1:18,0:18:61.04:61,0,738	0/1:19,0:19:85.24:85,0,893	0/1:26,0:26:99:119,0,1117	0/1:8,0:8:79.34:103,0,79
chr10	29565411	.	A	AT	29767.70	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-7.467;DP=724;FS=3.767;HRun=0;HaplotypeScore=76.1866;InbreedingCoeff=0.9987;MQ=81.80;MQ0=0;MQRankSum=-10.734;QD=43.65;ReadPosRankSum=6.600;VQSLOD=4.7352;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,42:43:99:1955,123,0	1/1:0,9:9:24.08:384,24,0	0/0:27,0:27:79.67:0,80,944	0/0:15,0:15:42.10:0,42,548	1/1:0,21:21:60.20:959,60,0	1/1:0,18:18:45.15:719,45,0	1/1:0,36:36:99:1583,99,0	1/1:0,40:40:99:1912,120,0	1/1:0,22:22:66.23:1055,66,0	1/1:3,30:33:90.31:1432,90,0	1/1:0,19:19:45.15:719,45,0	1/1:0,30:30:90.31:1439,90,0	1/1:0,31:31:81.28:1295,81,0	1/1:0,27:27:75.26:1199,75,0	1/1:0,17:17:48.16:767,48,0	1/1:0,21:21:57.19:911,57,0	1/1:1,32:33:84.29:1343,84,0	1/1:0,28:28:81.28:1295,81,0	1/1:2,11:13:33.11:522,33,0	1/1:1,25:26:63.21:1007,63,0	1/1:0,38:38:99:1583,99,0	1/1:0,18:18:54.18:863,54,0	1/1:2,19:21:51.17:796,51,0	1/1:1,40:41:99:1678,105,0	1/1:0,25:25:66.23:1055,66,0	1/1:1,31:32:93.32:1473,93,0	1/1:0,26:26:75.26:1199,75,0	1/1:1,13:14:39.13:623,39,0
chr10	29566921	.	AT	A	1707.10	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.765;DP=660;FS=4.225;HRun=9;HaplotypeScore=69.8118;InbreedingCoeff=0.9782;MQ=71.38;MQ0=6;MQRankSum=-1.844;QD=18.16;ReadPosRankSum=2.160;VQSLOD=3.9958;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,132,1493	0/0:7,0:7:18.05:0,18,208	0/0:18,0:12:12.06:0,12,192	0/0:16,0:16:21.75:0,22,270	0/0:28,0:27:75.22:0,75,865	0/0:19,0:19:53.99:0,54,599	0/0:19,0:18:45.13:0,45,517	0/0:27,0:24:54.15:0,54,615	1/1:3,17:20:48.03:439,48,0	0/0:33,0:33:84.21:0,84,941	0/0:26,0:26:68.93:0,69,774	0/0:30,0:30:75.20:0,75,846	0/0:21,0:21:48.14:0,48,554	0/0:20,0:20:51.15:0,51,588	0/0:23,0:23:32.88:0,33,631	0/0:14,1:15:14.66:0,15,423	1/1:5,28:33:66.03:604,66,0	1/1:5,36:40:76.86:807,77,0	0/0:32,0:29:72.21:0,72,831	0/0:26,0:25:72.21:0,72,830	0/0:14,0:14:39.10:0,39,439	0/0:24,0:24:69.19:0,69,779	0/0:20,0:20:57.17:0,57,657	0/0:13,0:13:38.78:0,39,426	0/0:25,0:26:75.06:0,75,845	0/0:22,0:22:57.15:0,57,648	0/0:28,0:29:78.06:0,78,879	0/0:11,0:11:24.05:0,24,257
chr10	29567464	.	GAC	G	381.53	PASS	AB=1.000;AC=8;AF=0.160;AN=50;BaseQRankSum=3.723;DP=615;FS=0.000;HRun=0;HaplotypeScore=123.9660;InbreedingCoeff=0.4997;MQ=66.01;MQ0=10;MQRankSum=2.969;QD=3.97;ReadPosRankSum=1.643;VQSLOD=2.3886;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:11.99:0,12,107	0/0:8,0:8:2.98:0,3,22	./.	./.	0/1:10,0:10:0:0,0,0	0/0:18,0:17:3.01:0,3,36	0/0:29,0:29:8.99:0,9,80	0/0:30,0:30:2.66:0,3,5	1/1:15,0:18:6.15:28,6,0	0/0:24,0:24:28.21:0,28,291	./.	0/0:33,0:32:12.02:0,12,147	0/0:15,0:15:5.93:0,6,40	0/0:26,0:24:8.60:0,9,103	0/0:19,0:19:2.99:0,3,24	0/0:21,0:21:9:0,9,84	1/1:18,5:30:38.10:305,38,0	1/1:13,10:23:17.88:172,18,0	0/0:18,0:17:5.98:0,6,56	0/0:18,0:18:2.99:0,3,24	0/0:39,0:39:12:0,12,121	0/0:13,0:13:6:0,6,58	0/1:13,0:13:0:0,0,0	0/0:26,0:26:5.99:0,6,50	0/0:21,0:20:5.98:0,6,57	0/0:29,0:27:20.93:0,21,193	0/0:11,0:11:3.01:0,3,36	0/0:10,0:9:9.50:0,9,114
chr10	29567487	.	A	ACG	1343.87	PASS	AB=0.982;AC=23;AF=0.411;AN=56;BaseQRankSum=-4.713;DP=639;FS=0.878;HRun=0;HaplotypeScore=125.7478;InbreedingCoeff=-0.5144;MQ=48.60;MQ0=26;MQRankSum=1.746;QD=2.69;ReadPosRankSum=2.411;VQSLOD=2.4149;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:27:4.95:5,0,183	0/1:9,0:9:2.05:2,0,79	0/0:12,0:6:17.98:0,18,188	0/0:23,0:9:20.74:0,21,202	0/1:13,0:12:8.34:8,0,41	0/1:20,0:18:41.72:113,0,42	0/1:10,16:26:61.24:61,0,99	0/1:30,0:30:99:157,0,253	0/0:20,0:19:35.76:0,36,281	0/1:26,0:25:99:160,0,204	0/1:18,0:15:8.85:9,0,43	0/1:36,0:35:72.58:73,0,168	0/0:18,0:18:39.86:0,40,256	0/1:30,0:28:88.62:89,0,109	0/1:19,0:18:45.92:46,0,72	0/1:18,0:17:64.79:102,0,65	0/0:38,0:38:82.14:0,82,684	0/0:28,0:26:21.41:0,21,402	0/1:13,0:12:44.17:44,0,95	0/1:14,0:13:29.23:89,0,29	0/1:63,0:61:99:104,0,224	1/1:10,0:10:8.01:73,8,0	0/1:15,0:15:13.29:43,0,13	0/1:37,0:36:80.53:81,0,228	0/1:25,0:24:80.01:80,0,125	0/1:30,0:28:88.73:89,0,242	0/1:8,0:8:38.52:45,0,39	0/1:11,0:9:31.63:32,0,60
chr10	29568424	.	CTT	C	1219.90	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-7.644;DP=510;FS=0.573;HRun=9;HaplotypeScore=130.7407;InbreedingCoeff=0.9648;MQ=80.70;MQ0=1;MQRankSum=1.877;QD=24.90;ReadPosRankSum=1.958;VQSLOD=2.6278;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:3,0:15:41.92:0,42,427	0/0:3,0:6:15.03:0,15,165	0/0:20,0:19:21.26:0,21,544	0/0:19,0:18:8.38:0,8,441	0/0:5,0:32:73.19:0,73,709	0/0:4,0:26:57.11:0,57,589	0/0:3,0:19:42.04:0,42,395	0/0:10,0:29:77.06:0,77,795	1/1:2,17:18:45.13:524,45,0	0/0:3,0:22:66.04:0,66,652	0/0:2,0:18:54.01:0,54,530	0/0:4,0:18:33.06:0,33,330	0/0:3,0:20:48.07:0,48,460	0/0:3,0:13:30.01:0,30,289	0/0:1,0:12:30.05:0,30,299	0/0:2,0:17:36.06:0,36,359	1/1:1,11:12:27.08:315,27,0	1/1:2,16:18:45.13:523,45,0	0/0:11,0:21:51.02:0,51,537	0/0:3,0:15:38.88:0,39,358	0/0:1,0:10:20.87:0,21,187	0/0:1,0:16:39.59:0,40,374	0/0:1,0:10:20.37:0,20,201	0/0:4,0:17:24.71:0,25,256	0/0:5,0:12:26.09:0,26,268	0/0:4,0:30:87.12:0,87,878	0/0:8,0:30:57.11:0,57,595	0/0:0,0:10:30.05:0,30,289
chr10	29571333	.	CG	C	13038.79	PASS	AB=0.816;AC=50;AF=0.893;AN=56;BaseQRankSum=-2.512;DP=626;FS=35.872;HRun=4;HaplotypeScore=81.8072;InbreedingCoeff=0.5756;MQ=82.92;MQ0=0;MQRankSum=-7.091;QD=22.21;ReadPosRankSum=8.013;VQSLOD=2.4897;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:47,0:47:1.50:124,1,0	1/1:0,11:11:27.08:323,27,0	0/0:20,0:20:45.04:0,45,546	0/0:19,0:19:44.97:0,45,469	0/1:5,7:12:9.80:223,0,10	1/1:4,19:23:59.07:659,59,0	1/1:0,31:31:75.23:896,75,0	1/1:5,22:27:55.67:713,56,0	0/1:31,0:31:27.77:77,0,28	1/1:5,13:18:41.99:447,42,0	1/1:1,10:11:33.05:370,33,0	1/1:0,26:26:69.21:825,69,0	1/1:1,15:16:42.12:493,42,0	1/1:3,21:24:59.27:715,59,0	1/1:1,15:16:39.11:458,39,0	1/1:0,12:12:24.07:287,24,0	1/1:43,1:44:16.28:128,16,0	1/1:22,0:22:12.58:59,13,0	1/1:2,18:20:53.19:616,53,0	1/1:5,15:20:46.84:519,47,0	1/1:3,30:33:77.16:979,77,0	1/1:3,16:19:50.20:583,50,0	1/1:3,11:14:22.08:332,22,0	1/1:1,32:33:90.27:1067,90,0	1/1:3,19:22:44.21:564,44,0	1/1:4,17:21:48.70:575,49,0	1/1:0,25:25:57.15:682,57,0	1/1:0,9:9:27.08:323,27,0
chr10	29571337	.	GT	G	6698.74	PASS	AB=0.970;AC=43;AF=0.768;AN=56;BaseQRankSum=4.075;DP=646;FS=5.484;HRun=8;HaplotypeScore=103.9861;InbreedingCoeff=0.1013;MQ=81.13;MQ0=0;MQRankSum=-5.609;QD=10.98;ReadPosRankSum=10.298;VQSLOD=2.0675;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:3,48:51:99:1129,117,0	1/1:11,0:11:23.61:95,24,0	0/0:15,0:15:41.92:0,42,434	0/0:21,0:21:29.29:0,29,347	0/1:14,0:14:38.96:39,0,50	1/1:21,2:23:29.51:221,30,0	1/1:31,0:31:67.23:296,67,0	0/1:28,1:29:75.14:110,0,75	1/1:2,28:30:72.12:695,72,0	0/1:16,1:17:27.41:82,0,27	1/1:10,1:11:25.27:108,25,0	0/1:29,0:29:5.12:194,0,5	0/1:18,1:19:29.85:124,0,30	1/1:24,0:24:8.33:189,8,0	1/1:16,0:16:10.87:125,11,0	0/1:14,0:14:26.20:55,0,26	1/1:4,43:47:99:1109,101,0	1/1:1,21:22:57.04:540,57,0	0/1:21,0:21:26.69:102,0,27	0/1:20,1:21:25.76:113,0,26	1/1:31,1:32:40.77:288,41,0	0/1:19,2:21:3.21:136,0,3	1/1:13,1:14:5.40:93,5,0	1/1:34,1:35:36.82:316,37,0	1/1:23,0:23:19.46:151,19,0	1/1:19,1:20:17.15:144,17,0	1/1:26,0:26:13.95:158,14,0	1/1:9,0:9:23.04:87,23,0
chr10	29571862	.	TTC	T	2137.88	PASS	AB=1.000;AC=32;AF=0.571;AN=56;BaseQRankSum=-8.525;DP=359;FS=23.932;HRun=0;HaplotypeScore=68.0844;InbreedingCoeff=-0.2493;MQ=82.93;MQ0=0;MQRankSum=0.971;QD=7.10;ReadPosRankSum=-3.707;VQSLOD=0.8224;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,19:20:48.16:745,48,0	0/1:8,0:8:18.63:52,0,19	0/0:23,0:22:45.95:0,46,602	0/0:21,1:20:37.83:0,38,531	0/1:15,0:15:41.04:93,0,41	0/1:8,0:8:31.84:32,0,41	0/1:13,0:13:46.14:46,0,55	1/1:14,0:14:2.95:187,3,0	0/0:10,0:10:26.47:0,26,302	0/1:8,0:8:22.17:48,0,22	0/1:9,0:9:36.68:37,0,41	1/1:18,0:18:15.08:146,15,0	0/1:8,0:8:31.75:32,0,60	0/1:7,0:7:15.64:16,0,33	0/1:16,0:16:13.40:13,0,111	0/1:16,0:16:7.25:7,0,108	0/1:21,0:21:12.19:66,0,12	1/1:17,0:20:15.42:124,15,0	0/1:15,0:16:69.59:106,0,70	0/0:3,0:3:2.96:0,3,19	0/1:14,0:15:37.37:73,0,37	1/1:4,0:4:5.88:36,6,0	0/1:6,0:7:10.32:43,0,10	1/1:14,0:15:9.65:100,10,0	1/1:7,0:11:5:49,5,0	0/1:9,0:9:23.86:79,0,24	0/1:16,0:16:58.86:59,0,73	1/1:7,0:7:1.37:118,1,0
chr10	29571873	.	C	CG	1684.51	PASS	AB=0.935;AC=31;AF=0.554;AN=56;BaseQRankSum=-7.518;DP=493;FS=36.095;HRun=0;HaplotypeScore=134.5099;InbreedingCoeff=-0.0953;MQ=75.14;MQ0=0;MQRankSum=1.755;QD=4.43;ReadPosRankSum=2.474;VQSLOD=1.6170;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:59.68:0,60,450	1/1:11,0:11:0.97:35,1,0	0/0:20,0:20:7.41:0,7,240	0/1:22,0:20:81.35:81,0,239	0/1:20,0:21:50.91:90,0,51	1/1:12,0:12:1.47:17,1,0	0/1:27,0:27:14.10:156,0,14	1/1:18,0:18:22.20:192,22,0	0/0:14,0:14:14.74:0,15,107	0/1:11,0:11:30.45:30,0,47	0/1:14,0:14:9.51:94,0,10	0/0:10,1:26:4.36:0,4,11	0/1:10,0:10:6.30:33,0,6	0/0:10,6:16:5.22:0,5,33	0/1:22,0:22:47.16:47,0,67	0/1:25,0:25:53.56:75,0,54	1/1:8,22:32:30.77:371,31,0	1/1:10,13:25:21.76:265,22,0	0/1:12,0:13:36.19:36,0,46	0/1:13,0:13:15.84:41,0,16	0/1:9,2:21:6.06:6,0,62	1/1:7,0:7:2.12:22,2,0	0/0:5,0:12:2.36:0,2,9	1/1:7,1:25:2.84:14,3,0	1/1:14,0:14:10.91:90,11,0	0/1:5,0:12:5.70:105,0,6	0/1:17,0:17:22.05:22,0,54	1/1:8,0:8:3.46:26,3,0
chr10	29572775	.	G	GA	1117.06	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.296;DP=806;FS=0.000;HRun=1;HaplotypeScore=93.7510;InbreedingCoeff=0.9999;MQ=57.71;MQ0=12;MQRankSum=1.724;QD=33.85;ReadPosRankSum=1.034;VQSLOD=3.4263;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,31:33:81.27:1212,81,0	0/0:20,0:20:60.19:0,60,776	0/0:45,0:23:66.13:0,66,811	0/0:32,0:21:54.16:0,54,674	0/0:29,0:29:84.27:0,84,1083	0/0:33,0:33:99:0,99,1269	0/0:32,0:32:90.28:0,90,1156	0/0:39,0:38:99:0,105,1351	0/0:27,0:27:81.20:0,81,981	0/0:38,0:38:99:0,114,1480	0/0:24,0:24:66.21:0,66,843	0/0:26,0:26:78.23:0,78,979	0/0:32,0:32:87.28:0,87,1129	0/0:23,0:23:66.19:0,66,825	0/0:19,0:19:57.19:0,57,739	0/0:31,0:31:87.27:0,87,1115	0/0:28,0:28:84.27:0,84,1085	0/0:23,0:23:63.16:0,63,770	0/0:14,0:13:39.13:0,39,505	0/0:37,0:37:99:0,105,1332	0/0:27,0:27:78.24:0,78,991	0/0:27,0:27:78.24:0,78,997	0/0:32,0:32:90.29:0,90,1168	0/0:22,0:22:63.19:0,63,803	0/0:21,0:21:63.20:0,63,817	0/0:44,0:44:99:0,120,1538	0/0:33,0:33:93.28:0,93,1190	0/0:15,0:15:45.02:0,45,484
chr10	29575104	.	GATA	G	639.69	PASS	AB=0.732;AC=2;AF=0.036;AN=56;BaseQRankSum=7.023;DP=583;FS=3.220;HRun=0;HaplotypeScore=74.2061;InbreedingCoeff=-0.0411;MQ=65.82;MQ0=31;MQRankSum=6.760;QD=15.23;ReadPosRankSum=-2.438;VQSLOD=2.9046;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:15:27.09:0,27,663	0/0:5,0:5:9.03:0,9,222	0/1:10,10:14:99:485,0,179	0/1:16,5:11:99:243,0,122	0/0:30,0:30:69.24:0,69,1697	0/0:28,0:26:60.21:0,60,1474	0/0:9,0:9:12.04:0,12,295	0/0:38,0:17:51.18:0,51,1257	0/0:25,0:25:48.16:0,48,1181	0/0:25,0:21:63.20:0,63,1499	0/0:29,0:29:60.21:0,60,1477	0/0:11,0:9:24.08:0,24,591	0/0:23,0:22:51.18:0,51,1251	0/0:25,0:23:54.19:0,54,1326	0/0:22,0:21:45.15:0,45,1106	0/0:14,0:14:30.10:0,30,738	0/0:20,0:18:42.14:0,42,1033	0/0:21,0:21:51.17:0,51,1184	0/0:26,0:17:51.18:0,51,1231	0/0:17,0:17:51.18:0,51,1230	0/0:21,0:19:48.16:0,48,1156	0/0:17,0:16:42.14:0,42,1034	0/0:10,0:10:27.09:0,27,664	0/0:13,0:12:30.10:0,30,738	0/0:23,0:23:66.23:0,66,1623	0/0:22,0:22:66.23:0,66,1596	0/0:38,0:36:90.20:0,90,2213	0/0:8,0:7:15.05:0,15,370
chr10	29575108	.	T	TG	473.06	PASS	AB=0.733;AC=2;AF=0.036;AN=56;BaseQRankSum=6.881;DP=593;FS=7.017;HRun=0;HaplotypeScore=58.7754;InbreedingCoeff=-0.0396;MQ=66.46;MQ0=30;MQRankSum=6.510;QD=11.00;ReadPosRankSum=-1.867;VQSLOD=3.0835;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:13:27.09:0,27,376	0/0:7,0:7:12.04:0,12,168	0/1:12,10:16:96.80:345,0,97	0/1:15,6:10:57.09:216,0,57	0/0:32,0:32:69.23:0,69,963	0/0:28,0:26:60.20:0,60,837	0/0:9,0:9:12.04:0,12,168	0/0:39,0:17:51.17:0,51,710	0/0:27,0:27:48.16:0,48,670	0/0:25,0:21:63.20:0,63,864	0/0:28,0:28:63.21:0,63,880	0/0:11,0:9:24.08:0,24,335	0/0:22,0:21:51.17:0,51,712	0/0:26,0:24:54.18:0,54,750	0/0:23,0:22:45.15:0,45,628	0/0:12,0:12:30.10:0,30,419	0/0:21,0:19:42.14:0,42,587	0/0:19,0:19:42.14:0,42,587	0/0:26,0:17:51.17:0,51,713	0/0:16,0:16:48.16:0,48,671	0/0:21,0:19:48.13:0,48,651	0/0:18,0:17:48.15:0,48,654	0/0:10,0:10:27.09:0,27,377	0/0:14,0:14:33.11:0,33,461	0/0:24,0:24:69.23:0,69,965	0/0:21,0:21:63.21:0,63,881	0/0:39,0:37:90.30:0,90,1257	0/0:13,0:11:23.98:0,24,274
chr10	29577146	.	T	TC	236.76	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=-3.223;DP=445;FS=12.274;HRun=8;HaplotypeScore=38.6634;InbreedingCoeff=0.5927;MQ=50.17;MQ0=21;MQRankSum=1.929;QD=5.38;ReadPosRankSum=2.126;VQSLOD=-0.1832;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:30.01:0,30,272	0/0:8,0:7:6:0,6,55	0/0:17,0:2:3.47:0,3,28	0/1:22,0:4:9:9,0,22	0/0:19,0:18:24.01:0,24,219	0/0:20,0:18:24.01:0,24,218	0/0:16,0:15:15:0,15,137	0/0:26,0:22:54.02:0,54,494	0/0:21,0:19:33:0,33,297	0/0:13,0:11:32.05:0,32,279	0/0:15,0:15:11.99:0,12,105	0/0:16,0:16:36.02:0,36,329	0/0:11,0:10:21:0,21,192	0/0:19,0:18:35.99:0,36,329	0/0:16,0:16:21.01:0,21,192	0/0:14,0:14:30.01:0,30,275	1/1:1,12:13:21.06:242,21,0	1/1:2,6:6:9.03:104,9,0	0/0:13,0:10:30.02:0,30,274	0/0:19,0:18:11.58:0,12,109	0/0:16,0:16:18.01:0,18,165	0/0:9,0:8:3.47:0,3,26	0/0:21,0:21:33:0,33,298	0/0:7,0:7:8.59:0,9,82	0/0:13,0:13:21.01:0,21,192	0/0:13,0:13:30.01:0,30,274	0/0:15,1:13:23.72:0,24,219	0/0:13,0:12:20.99:0,21,192
chr10	29577368	.	T	TTA	14641.33	PASS	AB=0.574;AC=49;AF=0.875;AN=56;BaseQRankSum=-4.944;DP=395;FS=18.790;HRun=0;HaplotypeScore=41.4766;InbreedingCoeff=0.4768;MQ=47.61;MQ0=28;MQRankSum=-0.158;QD=38.03;ReadPosRankSum=3.972;VQSLOD=4.6796;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:12:14.13:59,14,0	1/1:0,4:4:6.02:112,6,0	0/0:5,0:5:13.32:0,13,127	0/0:4,0:4:12.04:0,12,166	1/1:1,13:13:30.99:522,31,0	1/1:2,20:21:11.69:864,12,0	0/1:2,12:14:3.36:609,0,3	0/1:7,17:19:31.11:801,0,31	1/1:1,19:18:51.17:941,51,0	1/1:2,10:11:21.07:391,21,0	1/1:0,9:10:21.07:374,21,0	1/1:0,14:13:30.10:537,30,0	1/1:1,13:13:30.10:518,30,0	1/1:0,16:14:42.14:776,42,0	1/1:0,17:17:51.17:944,51,0	1/1:1,19:19:48.06:834,48,0	1/1:6,14:14:39.13:693,39,0	1/1:1,12:12:33.11:612,33,0	1/1:3,8:9:27.06:445,27,0	1/1:0,12:12:30.10:542,30,0	1/1:0,16:16:42.14:777,42,0	0/1:2,4:6:33.47:77,0,33	1/1:0,8:7:12.04:223,12,0	1/1:1,5:5:15.05:272,15,0	1/1:1,11:11:24.08:430,24,0	1/1:1,17:17:45.07:743,45,0	1/1:3,21:21:51.17:943,51,0	1/1:1,15:15:33.11:602,33,0
chr10	29581521	.	TTTTC	T	10807.48	PASS	AB=1.000;AC=49;AF=0.907;AN=54;BaseQRankSum=-2.361;DP=546;FS=17.137;HRun=0;HaplotypeScore=170.1252;InbreedingCoeff=0.4557;MQ=56.53;MQ0=5;MQRankSum=0.898;QD=20.35;ReadPosRankSum=0.225;VQSLOD=3.5944;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:21,0:19:14.22:14,0,74	1/1:9,1:10:19.33:217,19,0	0/0:15,0:10:11.60:0,12,189	0/1:14,0:8:0.86:1,0,100	1/1:4,21:25:51.35:461,51,0	1/1:12,6:18:48.53:637,49,0	1/1:18,3:21:36.23:509,36,0	1/1:14,0:14:19.90:342,20,0	1/1:8,0:7:7.67:58,8,0	1/1:18,6:24:57.48:583,57,0	1/1:20,7:26:33.42:532,33,0	1/1:16,1:17:16.88:231,17,0	1/1:27,0:26:63:530,63,0	1/1:19,1:20:32.95:394,33,0	1/1:15,4:19:26.49:474,26,0	1/1:27,4:31:68.27:911,68,0	1/1:30,0:29:13.54:90,14,0	0/1:21,0:21:8.81:88,0,9	1/1:11,1:11:22.11:248,22,0	1/1:26,6:32:76.54:976,77,0	1/1:11,0:11:19.28:203,19,0	1/1:11,4:15:37.25:429,37,0	1/1:22,3:25:62.73:705,63,0	1/1:13,1:14:29.30:284,29,0	1/1:20,6:26:68.91:792,69,0	1/1:15,1:15:33.38:310,33,0	1/1:26,6:31:64.55:787,65,0	./.
chr10	29581522	.	TTTC	T	6971.29	PASS	AB=1.000;AC=48;AF=0.889;AN=54;BaseQRankSum=-2.374;DP=544;FS=3.011;HRun=0;HaplotypeScore=173.0129;InbreedingCoeff=0.2247;MQ=57.62;MQ0=5;MQRankSum=0.462;QD=13.20;ReadPosRankSum=-2.964;VQSLOD=3.9517;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:19:46.70:47,0,57	1/1:10,0:10:15.29:100,15,0	0/0:16,0:11:20.02:0,20,222	0/1:14,0:8:14.79:15,0,98	1/1:23,2:25:45.78:292,46,0	1/1:18,0:18:46.63:375,47,0	1/1:20,0:20:37.91:321,38,0	1/1:13,0:13:20.10:199,20,0	1/1:8,0:7:11.68:84,12,0	1/1:24,0:24:50.88:388,51,0	1/1:27,0:26:31.49:288,31,0	1/1:15,1:16:19.54:201,20,0	1/1:27,0:26:41.14:333,41,0	1/1:20,0:20:34.48:251,34,0	1/1:19,0:19:3.56:284,4,0	1/1:32,0:32:71.64:561,72,0	0/1:30,0:29:17.17:122,0,17	0/1:21,0:21:57.08:81,0,57	1/1:11,0:10:23.20:189,23,0	1/1:31,0:31:52.47:532,52,0	1/1:11,0:11:19.14:164,19,0	1/1:15,0:15:31.37:276,31,0	1/1:25,0:25:59.85:441,60,0	1/1:14,0:14:25.29:187,25,0	1/1:26,0:26:58.21:426,58,0	1/1:17,0:16:35.81:299,36,0	1/1:30,2:31:55.43:514,55,0	./.
chr10	29581524	.	TC	T	6280.85	PASS	AB=1.000;AC=51;AF=0.944;AN=54;BaseQRankSum=-1.561;DP=482;FS=2.183;HRun=1;HaplotypeScore=136.6885;InbreedingCoeff=0.6539;MQ=59.78;MQ0=4;MQRankSum=-1.225;QD=13.48;ReadPosRankSum=0.390;VQSLOD=4.0403;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:18:27.51:172,28,0	1/1:7,0:7:18.40:110,18,0	0/0:16,0:11:19.51:0,20,183	0/1:14,0:8:11.01:11,0,76	1/1:24,0:24:39.49:210,39,0	1/1:17,0:17:42.75:269,43,0	1/1:19,0:19:36.43:238,36,0	1/1:15,0:15:33.57:223,34,0	1/1:8,0:7:18.83:136,19,0	1/1:19,2:21:49.22:417,49,0	1/1:22,0:22:42.18:260,42,0	1/1:10,1:11:20.23:111,20,0	1/1:20,3:22:52.17:302,52,0	1/1:14,1:15:36.77:219,37,0	1/1:13,1:14:35.07:219,35,0	1/1:23,4:27:67.91:427,68,0	1/1:21,1:21:36.18:232,36,0	1/1:19,1:20:15.37:170,15,0	1/1:10,1:10:28.61:179,29,0	1/1:27,2:29:64.95:423,65,0	1/1:7,1:8:17.52:119,18,0	1/1:16,0:16:34.01:200,34,0	1/1:23,1:24:59.12:390,59,0	1/1:13,0:13:27.88:183,28,0	1/1:23,0:23:61.67:376,62,0	1/1:12,1:12:32.25:257,32,0	1/1:26,3:29:65.42:426,65,0	./.
chr10	29581721	.	G	GT	21221.14	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-8.215;DP=629;FS=6.167;HRun=4;HaplotypeScore=57.2088;InbreedingCoeff=0.9918;MQ=74.37;MQ0=0;MQRankSum=-8.951;QD=36.59;ReadPosRankSum=5.800;VQSLOD=4.5003;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,26:27:72.24:1008,72,0	1/1:0,6:6:15.05:210,15,0	0/0:25,0:23:58.12:0,58,608	0/0:23,0:20:55.91:0,56,611	1/1:5,30:35:81.24:1106,81,0	1/1:2,16:18:48.16:659,48,0	1/1:0,23:23:57.19:798,57,0	1/1:4,21:25:60.20:836,60,0	1/1:0,15:15:36.12:504,36,0	1/1:2,19:21:51.17:711,51,0	1/1:0,20:20:60.20:840,60,0	1/1:1,19:20:54.18:756,54,0	1/1:1,23:23:57.19:798,57,0	1/1:3,23:26:69.23:965,69,0	1/1:3,27:30:81.27:1134,81,0	1/1:1,31:32:81.27:1134,81,0	1/1:0,18:18:48.16:672,48,0	1/1:2,21:22:57.19:798,57,0	1/1:0,20:20:57.19:798,57,0	1/1:0,26:26:72.20:980,72,0	1/1:2,18:20:51.17:714,51,0	1/1:0,23:23:69.19:944,69,0	1/1:1,20:21:60.20:840,60,0	1/1:0,17:17:42.14:588,42,0	1/1:0,18:18:45.15:630,45,0	1/1:2,24:26:72.22:990,72,0	1/1:1,30:31:84.28:1176,84,0	1/1:0,15:15:45.15:630,45,0
chr10	29582048	.	A	ATT	5922.25	PASS	AB=0.545;AC=51;AF=0.911;AN=56;BaseQRankSum=1.857;DP=540;FS=2.027;HRun=8;HaplotypeScore=90.7486;InbreedingCoeff=0.6140;MQ=75.09;MQ0=5;MQRankSum=-5.655;QD=11.61;ReadPosRankSum=3.668;VQSLOD=1.6285;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,41:43:93.32:1476,93,0	1/1:2,0:4:4.99:17,5,0	0/0:19,0:18:42.09:0,42,457	0/0:11,0:7:0.45:0,0,1	1/1:3,0:26:56.66:193,57,0	1/1:2,0:19:29.94:103,30,0	1/1:4,0:22:44.92:155,45,0	1/1:2,0:22:44.30:181,44,0	1/1:0,8:8:15.05:238,15,0	1/1:6,0:21:32.91:112,33,0	1/1:4,0:21:32.13:116,32,0	1/1:3,0:18:29.94:103,30,0	1/1:1,0:20:44.92:155,45,0	1/1:2,1:15:27.96:133,28,0	1/1:2,0:17:32.44:112,32,0	1/1:1,0:21:42.42:146,42,0	1/1:0,17:18:42.14:667,42,0	1/1:3,21:25:56.04:826,56,0	1/1:5,0:19:31.85:119,32,0	1/1:3,0:21:47.38:168,47,0	1/1:1,0:23:39.93:137,40,0	1/1:1,0:22:41.96:143,42,0	1/1:1,0:14:19.78:68,20,0	0/1:3,0:18:7.91:52,0,8	1/1:3,0:19:37.53:130,38,0	1/1:3,0:18:41.95:168,42,0	1/1:4,1:26:35.42:159,35,0	1/1:0,0:6:12.48:43,12,0
chr10	29583579	.	GA	G	3488.04	PASS	AB=0.695;AC=35;AF=0.625;AN=56;BaseQRankSum=-0.434;DP=605;FS=15.163;HRun=15;HaplotypeScore=81.3306;InbreedingCoeff=-0.2542;MQ=75.00;MQ0=1;MQRankSum=-0.217;QD=6.66;ReadPosRankSum=4.311;VQSLOD=1.0971;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:14,27:42:65.14:343,0,65	1/1:3,8:12:2.26:131,2,0	0/0:26,0:22:1.17:0,1,198	0/1:19,0:17:16.97:17,0,65	0/1:16,7:23:79.62:80,0,117	0/1:12,10:22:99:108,0,125	0/1:12,12:25:49.67:203,0,50	0/1:10,6:16:47.55:85,0,48	1/1:2,0:20:32.56:94,33,0	1/1:9,9:18:2.18:129,2,0	0/1:12,9:22:3.78:98,0,4	1/1:7,10:19:12.91:180,13,0	1/1:9,8:18:2.18:133,2,0	0/1:9,8:17:68.93:69,0,69	0/1:11,8:19:72.87:102,0,73	1/1:5,8:14:2.19:133,2,0	0/0:23,1:34:52.25:0,52,547	0/0:19,2:21:10.02:0,10,305	1/1:10,9:20:9.85:172,10,0	0/1:13,16:29:58.89:154,0,59	0/1:6,7:14:6.81:66,0,7	1/1:11,17:28:2.48:206,2,0	0/1:8,10:18:45.32:122,0,45	1/1:4,17:22:22.99:268,23,0	0/1:6,9:15:5.27:78,0,5	0/1:15,12:28:80.13:164,0,80	0/1:13,12:25:7.02:173,0,7	1/1:9,9:19:28.57:179,29,0
chr10	29584273	.	GCCC	G	14074.37	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-7.025;DP=541;FS=5.900;HRun=9;HaplotypeScore=105.1559;InbreedingCoeff=0.9712;MQ=73.75;MQ0=1;MQRankSum=-5.666;QD=28.04;ReadPosRankSum=5.347;VQSLOD=3.1972;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,0:41:85.31:521,85,0	1/1:2,4:6:12.04:170,12,0	0/0:10,0:12:27.07:0,27,437	0/0:14,0:14:30.06:0,30,519	1/1:1,22:23:48.15:681,48,0	1/1:3,22:25:45.14:639,45,0	1/1:1,23:24:54.18:766,54,0	1/1:5,22:27:60.16:827,60,0	0/0:0,0:12:11.21:0,11,26	1/1:4,18:22:51.14:707,51,0	1/1:1,11:12:21.07:298,21,0	1/1:2,23:25:63.21:894,63,0	1/1:4,13:16:33.10:468,33,0	1/1:2,19:21:45.14:639,45,0	1/1:1,14:15:30.10:426,30,0	1/1:0,20:20:48.16:681,48,0	1/1:5,0:27:58.84:359,59,0	1/1:0,0:23:58.84:359,59,0	1/1:3,15:18:45.14:639,45,0	1/1:0,9:9:21.07:298,21,0	1/1:3,36:39:74.88:1064,75,0	1/1:0,12:12:33.11:468,33,0	1/1:1,12:13:27.09:383,27,0	1/1:2,21:23:42.13:596,42,0	1/1:1,14:15:36.11:511,36,0	1/1:5,20:25:60.16:832,60,0	1/1:0,9:9:27.09:383,27,0	1/1:0,11:11:33.11:468,33,0
chr10	29585023	.	CA	C	426.57	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=8.808;DP=679;FS=7.567;HRun=1;HaplotypeScore=133.3290;InbreedingCoeff=0.9910;MQ=80.89;MQ0=0;MQRankSum=-7.475;QD=16.41;ReadPosRankSum=0.864;VQSLOD=3.4738;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,26:26:77.02:521,77,0	0/0:9,0:9:27.09:0,27,428	0/0:23,0:23:52.18:0,52,1013	0/0:17,0:17:51.14:0,51,756	0/0:24,0:24:72.25:0,72,1151	0/0:21,0:21:63.21:0,63,1004	0/0:33,0:33:96.31:0,96,1512	0/0:32,0:32:96.33:0,96,1535	0/0:18,0:18:54.18:0,54,861	0/0:23,0:23:66.23:0,66,1053	0/0:18,0:18:54.18:0,54,863	0/0:19,0:19:57.19:0,57,899	0/0:15,0:15:42.13:0,42,645	0/0:24,0:24:69.23:0,69,1088	0/0:38,0:38:99:0,114,1807	0/0:30,0:29:87.30:0,87,1390	0/0:38,0:38:99:0,114,1823	0/0:22,0:22:66.23:0,66,1055	0/0:22,0:22:66.22:0,66,1039	0/0:20,0:20:60.20:0,60,959	0/0:44,0:44:99:0,129,2059	0/0:34,0:34:99:0,99,1582	0/0:20,0:20:60.20:0,60,952	0/0:40,0:40:99:0,117,1842	0/0:20,0:20:60.20:0,60,959	0/0:20,0:20:60.18:0,60,908	0/0:23,0:23:69.24:0,69,1100	0/0:6,0:6:18.06:0,18,288
chr10	29585025	.	GAACGTGT	G	1486.52	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=8.600;DP=683;FS=7.985;HRun=0;HaplotypeScore=214.8400;InbreedingCoeff=0.9910;MQ=81.33;MQ0=0;MQRankSum=-8.233;QD=57.17;ReadPosRankSum=0.968;VQSLOD=2.4885;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,26:26:78.27:1581,78,0	0/0:9,0:9:27.09:0,27,1131	0/0:25,0:25:72.22:0,72,2576	0/0:16,0:16:48.12:0,48,1496	0/0:24,0:24:72.25:0,72,2962	0/0:22,0:22:66.21:0,66,2614	0/0:32,0:32:96.33:0,96,3840	0/0:31,0:31:93.31:0,93,3597	0/0:18,0:18:54.17:0,54,2161	0/0:22,0:22:63.22:0,63,2587	0/0:18,0:18:54.19:0,54,2218	0/0:19,0:19:57.15:0,57,2160	0/0:15,0:15:42.12:0,42,1611	0/0:26,0:26:75.22:0,75,2922	0/0:38,0:38:99:0,114,4570	0/0:31,0:30:90.30:0,90,3629	0/0:38,0:38:99:0,114,4713	0/0:22,0:22:66.22:0,66,2661	0/0:22,0:22:66.14:0,66,2452	0/0:20,0:20:60.21:0,60,2516	0/0:44,0:44:99:0,129,5221	0/0:34,0:34:99:0,102,4064	0/0:20,0:20:60.18:0,60,2250	0/0:42,0:42:99:0,123,4863	0/0:20,0:20:60.19:0,60,2349	0/0:19,0:19:57.15:0,57,2253	0/0:24,0:24:72.25:0,72,2717	0/0:6,0:6:18.06:0,18,755
chr10	29586066	.	T	TA	2095.79	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-10.356;DP=657;FS=0.968;HRun=9;HaplotypeScore=64.2624;InbreedingCoeff=0.9993;MQ=83.91;MQ0=0;MQRankSum=-3.123;QD=23.29;ReadPosRankSum=2.969;VQSLOD=4.5578;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,23:28:60.16:664,60,0	0/0:11,0:11:29.99:0,30,258	0/0:29,0:28:40.81:0,41,409	0/0:17,0:17:30.11:0,30,242	0/0:36,0:37:63.54:0,64,756	0/0:24,0:24:59.97:0,60,521	0/0:22,0:24:58.92:0,59,485	0/0:33,0:33:77.94:0,78,671	1/1:2,15:17:39.11:431,39,0	0/0:28,0:28:74.97:0,75,649	0/0:22,0:22:56.98:0,57,495	0/0:12,0:14:26.02:0,26,214	0/0:16,0:16:41.98:0,42,365	0/0:28,0:28:77.97:0,78,677	0/0:22,0:22:62.97:0,63,543	0/0:29,0:29:83.95:0,84,721	1/1:1,24:25:57.15:631,57,0	1/1:2,18:20:48.13:531,48,0	0/0:17,0:17:47.98:0,48,415	0/0:26,0:26:74.97:0,75,647	0/0:21,0:21:56.99:0,57,495	0/0:18,0:18:53.96:0,54,461	0/0:26,0:26:71.97:0,72,621	0/0:23,0:23:59.97:0,60,517	0/0:24,0:24:65.97:0,66,569	0/0:28,0:28:71.98:0,72,625	0/0:26,0:26:74.98:0,75,651	0/0:24,0:24:59.98:0,60,521
chr10	29586603	.	G	GT	18779.56	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-5.660;DP=786;FS=9.014;HRun=8;HaplotypeScore=121.0499;InbreedingCoeff=0.9899;MQ=68.15;MQ0=1;MQRankSum=-2.264;QD=27.86;ReadPosRankSum=1.837;VQSLOD=3.5436;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:81.01:0,81,735	1/1:0,11:11:30.09:346,30,0	0/0:28,0:23:38.92:0,39,336	0/0:18,0:16:11.61:0,12,250	1/1:5,34:40:99:1071,99,0	1/1:5,23:28:63.19:727,63,0	1/1:3,19:22:51.15:589,51,0	1/1:5,28:33:84.11:917,84,0	0/0:35,0:35:87.04:0,87,796	1/1:5,22:28:66.03:740,66,0	1/1:2,18:20:48.06:524,48,0	1/1:3,19:23:38.56:677,39,0	1/1:1,28:29:75.19:851,75,0	1/1:5,21:27:32.47:596,32,0	1/1:3,34:37:96.29:1108,96,0	1/1:0,33:33:90.27:1039,90,0	1/1:4,36:40:99:1142,99,0	1/1:3,21:24:60.18:691,60,0	1/1:5,20:25:31.86:569,32,0	1/1:3,21:24:63.08:684,63,0	1/1:2,12:15:41.99:458,42,0	1/1:2,27:31:89.91:982,90,0	1/1:5,29:34:74.98:865,75,0	1/1:3,27:31:78.06:880,78,0	1/1:4,22:26:57.17:658,57,0	1/1:5,35:40:99:1201,108,0	1/1:2,36:41:99:1151,105,0	1/1:1,11:12:27.08:311,27,0
chr10	29588406	.	GTA	G	1820.23	PASS	AB=0.933;AC=40;AF=0.714;AN=56;BaseQRankSum=0.723;DP=356;FS=47.546;HRun=0;HaplotypeScore=64.6484;InbreedingCoeff=0.3691;MQ=83.06;MQ0=2;MQRankSum=-2.430;QD=6.36;ReadPosRankSum=-1.264;VQSLOD=0.9423;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:44.61:0,45,609	1/1:2,0:2:2.97:20,3,0	0/1:25,2:18:15.77:16,0,508	0/0:26,1:20:45.22:0,45,714	1/1:9,2:11:11.93:69,12,0	1/1:14,1:15:20.31:135,20,0	0/1:20,2:22:39.21:109,0,39	1/1:16,2:18:7.08:75,7,0	0/0:10,0:10:29.11:0,29,441	1/1:10,0:10:10.37:60,10,0	1/1:7,1:8:3.08:8,3,0	1/1:5,2:7:9.80:94,10,0	1/1:11,3:14:18.22:196,18,0	1/1:7,1:8:12.36:64,12,0	1/1:13,0:13:16.71:106,17,0	1/1:3,11:14:11.44:205,11,0	0/0:5,0:5:14.41:0,14,201	0/0:8,0:8:15.05:0,15,274	1/1:15,0:15:15.55:111,16,0	1/1:6,0:6:3.88:18,4,0	1/1:11,3:14:17.39:135,17,0	0/1:12,0:12:3.64:30,0,4	1/1:10,1:11:11.68:74,12,0	0/1:11,1:12:21.06:81,0,21	0/1:7,1:8:13.11:61,0,13	1/1:14,2:16:15.55:191,16,0	0/1:15,1:16:60.57:92,0,61	1/1:7,0:7:2.70:53,3,0
chr10	29588746	.	CTT	C	609.49	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=2.702;DP=578;FS=7.315;HRun=14;HaplotypeScore=102.7604;InbreedingCoeff=0.6014;MQ=64.96;MQ0=3;MQRankSum=4.793;QD=10.16;ReadPosRankSum=4.560;VQSLOD=2.3523;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,37:46:48.11:700,48,0	0/0:1,0:6:14.79:0,15,119	0/0:13,0:12:11.94:0,12,108	0/1:13,0:13:14.27:14,0,56	0/0:12,0:17:31.73:0,32,320	0/0:14,0:18:30.56:0,31,366	0/0:22,0:26:51.07:0,51,534	0/0:23,0:32:52.46:0,52,581	0/0:12,0:16:33.03:0,33,349	0/0:23,0:28:48.61:0,49,509	0/0:11,0:14:26.87:0,27,275	0/0:18,0:21:53.96:0,54,571	0/0:22,0:24:54.04:0,54,606	0/0:22,0:30:62.91:0,63,661	0/0:15,0:18:36.02:0,36,413	0/0:14,0:17:42.53:0,43,488	0/0:25,1:26:30.64:0,31,700	0/0:24,0:29:62.68:0,63,828	0/0:17,0:17:36.10:0,36,442	0/0:17,0:21:49.23:0,49,506	0/0:6,0:10:12.87:0,13,131	0/0:9,0:15:34.73:0,35,321	0/0:11,0:21:30:0,30,313	0/0:10,0:16:12:0,12,112	0/0:9,0:15:26.85:0,27,247	0/0:18,0:23:48.08:0,48,539	0/0:22,0:27:60.24:0,60,714	0/0:7,0:10:15.04:0,15,172
chr10	29589534	.	G	GC	6605.03	PASS	AB=1.000;AC=47;AF=0.839;AN=56;BaseQRankSum=-5.651;DP=337;FS=6.671;HRun=9;HaplotypeScore=37.9669;InbreedingCoeff=0.7893;MQ=76.17;MQ0=0;MQRankSum=-0.814;QD=24.28;ReadPosRankSum=1.017;VQSLOD=5.3281;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:7,0:7:3.06:3,0,113	1/1:0,5:5:9.03:118,9,0	0/0:8,0:8:16.23:0,16,142	0/0:14,0:13:3.06:0,3,118	1/1:1,5:6:12.04:158,12,0	1/1:1,10:11:15.05:197,15,0	1/1:4,16:21:38.99:488,39,0	1/1:3,9:12:15.05:197,15,0	1/1:1,13:14:30.10:394,30,0	1/1:1,13:14:33.07:399,33,0	1/1:1,6:7:15.04:179,15,0	1/1:1,12:13:24.08:315,24,0	1/1:3,15:18:38.93:467,39,0	1/1:3,10:13:17.79:208,18,0	1/1:0,12:12:18.06:237,18,0	1/1:1,10:11:24.08:316,24,0	0/0:21,0:20:54.13:0,54,576	0/0:22,0:22:63.16:0,63,676	1/1:1,9:10:27.07:338,27,0	1/1:2,6:8:18.01:208,18,0	1/1:6,23:29:65.73:800,66,0	1/1:0,6:6:15.05:197,15,0	1/1:0,9:9:15.05:197,15,0	1/1:2,11:13:18.06:237,18,0	1/1:2,4:6:15.03:182,15,0	1/1:0,5:5:15.01:179,15,0	1/1:3,16:19:39.13:512,39,0	1/1:0,3:3:6.02:79,6,0
chr10	29590438	.	T	TTCC	21328.44	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-10.680;DP=662;FS=48.065;HRun=0;HaplotypeScore=92.8463;InbreedingCoeff=0.9821;MQ=67.89;MQ0=4;MQRankSum=-3.537;QD=40.24;ReadPosRankSum=1.356;VQSLOD=3.4414;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:15,13:28:36.70:651,37,0	1/1:1,4:6:12.04:250,12,0	0/0:39,0:22:16.13:0,16,414	0/0:35,0:20:22.60:0,23,358	1/1:5,15:20:39.13:812,39,0	1/1:9,23:33:70.12:1370,70,0	1/1:3,14:17:36.12:698,36,0	1/1:9,11:23:41.47:708,41,0	1/1:5,25:30:63.22:1311,63,0	1/1:3,20:23:60.18:1187,60,0	1/1:3,7:11:15.05:312,15,0	1/1:5,20:26:54.18:1100,54,0	1/1:2,29:32:72.13:1478,72,0	1/1:7,21:30:60.21:1201,60,0	1/1:8,20:28:57.20:1139,57,0	1/1:4,22:27:54.18:1103,54,0	0/0:32,0:31:90.28:0,90,1306	0/0:26,0:26:75.25:0,75,1104	1/1:4,11:15:33.11:623,33,0	1/1:4,11:16:30.06:559,30,0	1/1:8,28:36:58.53:1224,59,0	1/1:6,11:17:36.12:702,36,0	1/1:4,15:20:48.16:976,48,0	1/1:6,20:28:43.48:879,43,0	1/1:4,14:18:33.11:688,33,0	1/1:3,16:19:48.16:970,48,0	1/1:5,12:18:42.14:824,42,0	1/1:0,9:9:27.09:562,27,0
chr10	29591179	.	G	GACACACACACACAC	7678.34	PASS	AB=1.000;AC=49;AF=0.875;AN=56;BaseQRankSum=1.163;DP=694;FS=0.759;HRun=0;HaplotypeScore=219.7189;InbreedingCoeff=0.2963;MQ=56.03;MQ0=14;MQRankSum=-4.153;QD=12.53;ReadPosRankSum=-3.446;VQSLOD=3.3309;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:28:4.08:81,4,0	1/1:3,0:9:9.01:308,9,0	0/0:39,0:17:3:0,3,27	0/0:27,0:15:0.43:0,0,22	1/1:18,0:28:3.01:103,3,0	1/1:19,0:35:5.99:125,6,0	1/1:27,0:26:17.30:263,17,0	1/1:28,0:27:26.88:499,27,0	1/1:7,5:22:3.01:201,3,0	1/1:27,0:27:34.60:727,35,0	1/1:8,0:19:12.04:529,12,0	1/1:7,0:19:3.01:142,3,0	1/1:11,0:21:3.01:102,3,0	1/1:20,0:34:9.03:348,9,0	1/1:18,0:34:15.05:672,15,0	1/1:11,0:24:12.04:450,12,0	0/1:29,0:32:99:230,0,1754	0/0:15,0:15:20.89:0,21,736	1/1:7,0:14:21.86:582,22,0	1/1:8,0:19:6.02:245,6,0	1/1:15,0:15:12.02:174,12,0	1/1:20,0:18:2.99:24,3,0	1/1:16,0:28:3.01:142,3,0	1/1:12,0:23:2.34:141,2,0	1/1:16,0:30:6.02:285,6,0	1/1:17,0:30:29.41:664,29,0	1/1:17,0:28:16.49:498,16,0	1/1:5,0:12:2.62:142,3,0
chr10	29591228	.	AT	A	380.77	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.858;DP=501;FS=1.050;HRun=5;HaplotypeScore=75.7377;InbreedingCoeff=0.9787;MQ=68.17;MQ0=0;MQRankSum=-2.945;QD=23.80;ReadPosRankSum=0.589;VQSLOD=2.5451;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,14:16:42.09:476,42,0	0/0:6,0:6:15.05:0,15,198	0/0:23,0:21:52.96:0,53,649	0/0:18,0:15:33.08:0,33,397	0/0:17,0:17:41.17:0,41,532	0/0:24,0:24:36.08:0,36,470	0/0:14,0:14:39.09:0,39,495	0/0:22,0:22:63.18:0,63,841	0/0:24,0:24:48.16:0,48,656	0/0:19,0:19:54.16:0,54,714	0/0:16,0:16:38.61:0,39,489	0/0:18,0:18:30.09:0,30,395	0/0:18,0:18:39.13:0,39,522	0/0:18,0:18:29.96:0,30,401	0/0:17,0:17:30.05:0,30,368	0/0:19,0:19:42.12:0,42,552	0/0:26,0:26:75.20:0,75,978	0/0:9,0:9:24.08:0,24,328	0/0:19,0:18:51.17:0,51,695	0/0:18,0:18:39.08:0,39,497	0/0:10,0:10:30.08:0,30,385	0/0:20,0:20:60.19:0,60,804	0/0:18,0:18:35.15:0,35,457	0/0:18,0:18:36.08:0,36,471	0/0:18,0:18:33.09:0,33,414	0/0:23,0:23:63.21:0,63,862	0/0:17,0:17:30.05:0,30,376	0/0:16,0:16:36.12:0,36,491
chr10	29591815	.	C	CA	2820.35	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-10.473;DP=743;FS=0.448;HRun=4;HaplotypeScore=68.8816;InbreedingCoeff=0.9998;MQ=83.30;MQ0=0;MQRankSum=-4.871;QD=32.79;ReadPosRankSum=1.783;VQSLOD=4.2547;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,40:46:99:1465,111,0	0/0:12,0:12:33.07:0,33,362	0/0:23,0:23:63.15:0,63,696	0/0:21,0:21:60.12:0,60,662	0/0:21,0:21:63.16:0,63,705	0/0:15,0:15:42.12:0,42,476	0/0:34,0:34:96.26:0,96,1078	0/0:31,0:31:87.23:0,87,970	1/1:2,38:40:99:1477,108,0	0/0:20,0:20:54.14:0,54,604	0/0:16,0:16:39.11:0,39,442	0/0:32,0:32:87.22:0,87,966	0/0:28,0:28:81.19:0,81,904	0/0:29,0:29:84.24:0,84,952	0/0:42,0:42:99:0,126,1420	0/0:36,0:36:99:0,105,1180	0/0:27,0:27:69.17:0,69,771	0/0:26,0:26:72.14:0,72,790	0/0:13,0:13:39.11:0,39,442	0/0:26,0:26:66.18:0,66,748	0/0:53,0:53:99:0,147,1645	0/0:16,0:16:47.50:0,47,519	0/0:25,0:25:66.14:0,66,719	0/0:29,0:29:81.23:0,81,919	0/0:18,0:18:48.13:0,48,544	0/0:23,0:22:63.11:0,63,691	0/0:24,0:24:72.21:0,72,817	0/0:17,0:17:51.15:0,51,579
chr10	29593145	.	A	AC	1065.14	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-6.391;DP=622;FS=1.868;HRun=0;HaplotypeScore=253.1535;InbreedingCoeff=0.8857;MQ=52.95;MQ0=5;MQRankSum=-2.998;QD=28.79;ReadPosRankSum=0.690;VQSLOD=2.7322;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:62.17:0,62,801	0/0:10,0:10:14.81:0,15,197	0/0:19,0:15:43.65:0,44,536	0/0:21,0:19:50.90:0,51,601	0/0:34,0:34:71.42:0,71,554	0/0:22,0:21:59.26:0,59,464	0/0:14,0:14:35.23:0,35,240	0/0:26,0:24:71.39:0,71,558	0/0:21,0:21:60.19:0,60,812	0/0:18,0:18:34.92:0,35,362	0/0:26,0:26:70.60:0,71,504	0/0:24,0:24:66.46:0,66,505	0/0:14,0:14:41.87:0,42,362	0/0:26,0:26:72.76:0,73,566	0/0:20,0:20:58.01:0,58,452	0/0:30,0:30:89.43:0,89,732	1/1:3,20:23:55.87:641,56,0	1/1:2,12:14:37.76:546,38,0	0/0:32,0:29:48.83:0,49,526	0/0:34,0:33:74.34:0,74,651	0/0:5,0:5:2.22:0,2,44	0/0:30,0:30:66.08:0,66,589	0/0:27,0:27:76.72:0,77,596	0/0:12,0:12:14.75:0,15,78	0/0:29,0:29:64.39:0,64,586	0/0:21,0:21:55.43:0,55,467	0/0:33,0:34:43.36:0,43,576	0/0:13,0:13:15.11:0,15,228
chr10	29593148	.	AC	A	10200.81	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=8.994;DP=612;FS=10.983;HRun=1;HaplotypeScore=215.1336;InbreedingCoeff=0.9883;MQ=51.66;MQ0=5;MQRankSum=-7.059;QD=20.69;ReadPosRankSum=-3.241;VQSLOD=2.1963;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:63:0,63,808	1/1:3,8:11:26.01:203,26,0	0/0:19,0:15:44.23:0,44,477	0/0:20,0:18:25.10:0,25,508	1/1:7,28:35:95.99:694,96,0	1/1:6,15:21:59.63:466,60,0	1/1:3,11:14:35.72:272,36,0	1/1:9,16:23:65.62:497,66,0	0/0:20,0:20:57.02:0,57,754	1/1:10,8:18:51.58:414,52,0	1/1:2,24:26:75.65:560,76,0	1/1:6,17:23:65.37:499,65,0	1/1:4,7:11:22.03:167,22,0	1/1:8,19:27:78.80:611,79,0	1/1:7,13:20:54.19:390,54,0	1/1:5,24:29:42.17:575,42,0	0/0:22,0:22:45.35:0,45,351	0/0:14,0:14:19.76:0,20,263	1/1:14,18:29:81.83:620,82,0	1/1:9,26:34:98.27:735,98,0	1/1:2,3:5:12.44:99,12,0	1/1:6,23:29:86.42:660,86,0	1/1:8,19:27:77.96:591,78,0	1/1:6,6:12:14.47:107,14,0	1/1:10,19:29:76.08:599,76,0	1/1:7,9:16:47.65:355,48,0	1/1:9,26:35:99:777,104,0	1/1:5,8:13:38.82:308,39,0
chr10	29593151	.	AAC	A	14310.44	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=8.790;DP=628;FS=17.577;HRun=0;HaplotypeScore=212.9458;InbreedingCoeff=0.9838;MQ=51.67;MQ0=5;MQRankSum=-6.535;QD=28.34;ReadPosRankSum=-2.562;VQSLOD=3.5950;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:69.23:0,69,1237	1/1:10,1:11:32.80:370,33,0	0/0:21,0:16:46.33:0,46,685	0/0:21,1:19:35.38:0,35,698	1/1:31,4:35:92.74:881,93,0	1/1:19,1:19:53.80:587,54,0	1/1:12,1:13:31.47:313,31,0	1/1:29,1:28:66.29:733,66,0	0/0:21,0:21:60.07:0,60,1034	1/1:19,1:20:52.85:534,53,0	1/1:26,2:28:74.22:775,74,0	1/1:19,2:21:58.67:640,59,0	1/1:11,0:11:10.80:239,11,0	1/1:26,2:28:77.11:893,77,0	1/1:19,1:20:53.85:561,54,0	1/1:27,1:28:24.24:952,24,0	0/0:20,0:20:48.16:0,48,796	0/0:15,0:15:42.13:0,42,733	1/1:33,2:32:80.71:871,81,0	1/1:34,3:36:98.55:1013,99,0	1/1:3,2:5:12.46:101,12,0	1/1:29,1:30:84.07:1008,84,0	1/1:28,0:28:72.71:755,73,0	1/1:12,0:12:17.36:168,17,0	1/1:28,2:30:65.41:848,65,0	1/1:14,1:15:45:501,45,0	1/1:32,3:35:99:1140,103,0	1/1:12,1:13:38.89:426,39,0
chr10	29593152	.	AC	A	9961.57	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=10.841;DP=623;FS=17.363;HRun=1;HaplotypeScore=216.2285;InbreedingCoeff=0.9680;MQ=51.77;MQ0=5;MQRankSum=-6.180;QD=20.04;ReadPosRankSum=-2.517;VQSLOD=2.0082;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:69.20:0,69,1007	1/1:4,7:11:32.13:211,32,0	0/0:22,0:17:50.45:0,50,615	0/0:23,0:19:35.46:0,35,558	1/1:12,23:35:93.44:657,93,0	1/1:6,13:19:53.69:414,54,0	1/1:3,9:12:32.70:241,33,0	1/1:15,14:27:70.33:515,70,0	0/0:21,0:21:59.55:0,60,851	1/1:15,5:20:54.05:432,54,0	1/1:9,19:28:83.07:622,83,0	1/1:7,13:20:59.40:435,59,0	1/1:3,7:10:5.16:148,5,0	1/1:10,17:27:77.97:595,78,0	1/1:6,12:18:53.13:374,53,0	1/1:5,23:28:34.59:527,35,0	0/0:21,0:21:51.16:0,51,716	0/0:15,0:15:42.06:0,42,582	1/1:18,16:31:82.60:617,83,0	1/1:14,23:36:99:747,100,0	1/1:4,1:5:12.43:94,12,0	1/1:8,21:29:84.49:617,84,0	1/1:11,17:28:77.47:592,77,0	1/1:6,6:12:17.40:125,17,0	1/1:14,16:30:62.33:579,62,0	1/1:8,8:16:47.62:344,48,0	1/1:14,22:36:99:783,106,0	1/1:6,7:13:38.61:290,39,0
chr10	29593246	.	CA	C	945.26	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=1.205;DP=657;FS=1.515;HRun=3;HaplotypeScore=102.8348;InbreedingCoeff=0.9991;MQ=82.99;MQ0=0;MQRankSum=-3.533;QD=29.54;ReadPosRankSum=2.040;VQSLOD=3.1348;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,31:32:84.26:1040,84,0	0/0:12,0:12:33.11:0,33,474	0/0:25,0:26:64.75:0,65,934	0/0:14,0:14:39.11:0,39,517	0/0:30,0:30:84.28:0,84,1203	0/0:27,0:27:81.26:0,81,1147	0/0:20,0:20:54.18:0,54,777	0/0:32,0:32:87.29:0,87,1252	0/0:14,0:14:42.14:0,42,603	0/0:24,0:24:66.22:0,66,927	0/0:27,0:27:78.26:0,78,1122	0/0:20,0:20:60.20:0,60,860	0/0:24,0:24:72.24:0,72,1030	0/0:24,0:24:69.18:0,69,943	0/0:10,0:10:30.10:0,30,427	0/0:25,0:25:75.25:0,75,1075	0/0:28,0:28:81.27:0,81,1166	0/0:16,0:16:48.16:0,48,685	0/0:23,0:23:69.23:0,69,986	0/0:26,0:26:75.20:0,75,1038	0/0:20,0:20:57.18:0,57,803	0/0:26,0:26:75.24:0,75,1063	0/0:32,0:32:90.28:0,90,1272	0/0:19,0:19:54.14:0,54,753	0/0:20,0:20:60.18:0,60,844	0/0:32,0:32:90.30:0,90,1296	0/0:41,0:41:99:0,108,1530	0/0:13,0:13:39.13:0,39,561
chr10	29593333	.	A	ATT	1016.21	PASS	AB=1.000;AC=8;AF=0.143;AN=56;BaseQRankSum=-0.396;DP=590;FS=0.000;HRun=11;HaplotypeScore=81.0622;InbreedingCoeff=0.7571;MQ=73.10;MQ0=0;MQRankSum=0.067;QD=12.55;ReadPosRankSum=0.536;VQSLOD=1.9795;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:87.05:0,87,836	0/0:10,0:10:30.01:0,30,274	0/0:18,0:17:25.75:0,26,207	0/1:12,0:12:20.48:20,0,46	0/0:23,0:23:44.96:0,45,436	0/0:29,0:29:38.27:0,38,553	0/0:19,0:20:52.34:0,52,475	0/0:31,0:31:71.69:0,72,664	1/1:4,1:17:25.47:121,25,0	0/0:22,0:22:35.91:0,36,339	0/0:13,0:14:35.37:0,35,313	0/0:18,0:18:38.99:0,39,369	0/0:17,0:17:32.97:0,33,320	0/0:25,0:25:38.87:0,39,378	0/0:19,0:19:45.82:0,46,455	0/0:21,0:22:47.73:0,48,443	1/1:7,16:25:48.14:649,48,0	1/1:3,9:15:31.57:373,32,0	0/0:19,0:19:35.71:0,36,327	0/0:27,0:30:68.48:0,68,634	0/0:14,0:15:29.71:0,30,263	0/0:18,0:18:35.94:0,36,337	0/0:18,0:18:42:0,42,401	0/0:17,0:17:35.99:0,36,349	0/0:20,0:21:41.67:0,42,390	0/0:22,0:24:38.63:0,39,401	0/0:43,0:43:61.44:0,61,842	0/1:12,0:12:1.59:2,0,179
chr10	29594334	.	CAT	C	7550.87	PASS	AB=0.995;AC=38;AF=0.679;AN=56;BaseQRankSum=12.928;DP=793;FS=1.162;HRun=0;HaplotypeScore=252.6431;InbreedingCoeff=-0.1242;MQ=55.55;MQ0=4;MQRankSum=-6.098;QD=10.59;ReadPosRankSum=12.087;VQSLOD=2.5696;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:51,0:51:45.38:588,0,45	1/1:11,0:11:7.53:183,8,0	0/0:40,0:24:42.02:0,42,830	0/0:40,0:24:66.57:0,67,965	0/1:20,1:21:9.14:169,0,9	0/1:19,0:19:3.23:201,0,3	0/1:36,1:37:29.23:402,0,29	0/1:46,0:45:99:331,0,168	1/1:29,0:29:28.23:382,28,0	0/1:27,0:26:58.39:209,0,58	1/1:19,0:19:22.92:236,23,0	0/1:35,0:35:42.93:357,0,43	1/1:26,2:28:18.93:370,19,0	0/1:34,0:34:53.48:410,0,53	1/1:23,0:23:33.80:337,34,0	1/1:22,0:22:11.55:252,12,0	1/1:33,0:31:17.74:392,18,0	0/1:19,0:19:1.89:148,0,2	0/1:22,0:21:63.48:124,0,63	1/1:27,0:26:39.16:346,39,0	0/1:46,0:46:17.49:344,0,17	1/1:31,0:31:17.45:327,17,0	1/1:31,0:31:18.06:322,18,0	0/1:31,0:31:34.85:225,0,35	1/1:19,0:19:3.03:254,3,0	0/1:22,0:22:5.25:227,0,5	0/1:19,0:19:41.93:214,0,42	1/1:11,0:11:32.35:201,32,0
chr10	29594336	.	TAC	T	20305.15	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=0.275;DP=803;FS=0.651;HRun=0;HaplotypeScore=217.3550;InbreedingCoeff=0.9210;MQ=55.25;MQ0=5;MQRankSum=-1.939;QD=28.28;ReadPosRankSum=4.571;VQSLOD=5.4917;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:14,39:53:99:1628,108,0	1/1:1,10:11:30.10:385,30,0	0/0:43,1:24:4.26:0,4,575	0/0:41,0:24:48.60:0,49,678	1/1:4,17:21:33.09:423,33,0	1/1:4,14:18:45.13:565,45,0	1/1:11,26:37:87.18:1101,87,0	1/1:13,33:45:99:1300,102,0	1/1:8,23:31:81.26:1031,81,0	1/1:9,20:28:63.14:776,63,0	1/1:3,16:19:41.92:514,42,0	1/1:11,24:35:66.19:822,66,0	1/1:8,20:28:54.22:794,54,0	1/1:10,24:34:78.25:1000,78,0	1/1:3,20:23:60.18:758,60,0	1/1:5,16:21:50.62:654,51,0	1/1:7,26:31:81.26:1040,81,0	1/1:6,13:19:42.11:524,42,0	1/1:8,12:19:42.13:527,42,0	1/1:9,17:25:63.20:805,63,0	1/1:19,28:47:83.76:1023,84,0	1/1:6,26:32:72.20:896,72,0	1/1:7,23:30:63:809,63,0	1/1:10,22:32:48.99:620,49,0	1/1:2,17:19:48.16:617,48,0	1/1:6,17:23:41.81:678,42,0	1/1:6,14:20:48.11:592,48,0	1/1:1,10:11:33.11:422,33,0
chr10	29594347	.	ACG	A	9609.78	PASS	AB=0.991;AC=47;AF=0.839;AN=56;BaseQRankSum=5.758;DP=822;FS=32.465;HRun=0;HaplotypeScore=272.4071;InbreedingCoeff=0.2603;MQ=50.31;MQ0=7;MQRankSum=-3.795;QD=13.15;ReadPosRankSum=9.174;VQSLOD=2.4953;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:59,0:59:49.18:686,0,49	1/1:12,0:12:29.70:217,30,0	0/0:50,0:21:8.38:0,8,612	0/0:40,0:23:39.68:0,40,596	1/1:20,0:20:22.41:210,22,0	1/1:17,0:17:41.28:287,41,0	1/1:38,0:38:47.28:506,47,0	0/1:45,0:44:92.80:463,0,93	1/1:31,0:31:37.73:524,38,0	0/1:30,0:29:53.12:281,0,53	1/1:20,0:20:13.64:240,14,0	1/1:27,1:28:52.64:485,53,0	1/1:27,0:27:42.19:435,42,0	1/1:32,0:32:60.66:524,61,0	1/1:25,0:25:19.51:374,20,0	1/1:21,1:23:53.10:367,53,0	1/1:33,0:31:43.75:494,44,0	0/1:25,0:24:91.70:154,0,92	0/1:20,1:19:7.74:246,0,8	1/1:27,0:26:0.63:329,1,0	1/1:51,1:52:13.08:425,13,0	1/1:33,0:33:64.97:453,65,0	1/1:27,0:27:61.79:425,62,0	1/1:31,0:31:48.03:330,48,0	1/1:21,0:21:47.06:328,47,0	1/1:24,0:24:3.59:306,4,0	1/1:19,0:19:12.51:303,13,0	1/1:11,0:11:32.53:217,33,0
chr10	29594354	.	CAT	C	2790.40	PASS	AB=0.992;AC=24;AF=0.429;AN=56;BaseQRankSum=5.429;DP=808;FS=48.456;HRun=0;HaplotypeScore=290.7388;InbreedingCoeff=-0.4812;MQ=49.08;MQ0=10;MQRankSum=-10.196;QD=4.71;ReadPosRankSum=3.112;VQSLOD=1.2657;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:56,1:58:99:0,133,1442	0/1:11,1:12:45.60:46,0,48	0/0:49,0:16:21.04:0,21,345	0/0:39,1:18:16.29:0,16,412	0/1:17,0:17:17.99:18,0,50	0/1:16,0:16:69.33:73,0,69	0/1:41,0:41:99:139,0,152	0/1:47,0:47:79.18:79,0,565	0/1:36,0:36:92.70:275,0,93	0/1:30,0:29:99:127,0,212	0/1:18,0:18:33.85:34,0,98	1/1:30,0:30:7.90:248,8,0	0/1:28,1:29:48.12:268,0,48	0/1:31,0:31:52.92:259,0,53	0/1:24,0:24:41.99:199,0,42	0/1:22,1:23:85.89:102,0,86	0/0:29,0:28:58.31:0,58,388	0/0:23,0:22:44.43:0,44,281	0/0:16,0:15:16.04:0,16,270	0/1:25,0:25:57.75:138,0,58	0/1:51,0:51:99:130,0,219	0/1:33,0:33:99:119,0,186	0/1:26,0:26:99:124,0,121	0/1:31,0:31:57.18:57,0,78	1/1:18,0:18:9.04:162,9,0	0/1:25,0:25:99:112,0,153	0/1:18,0:18:17.50:160,0,18	0/1:11,0:11:51.27:85,0,51
chr10	29594356	.	TAC	T	10020.56	PASS	AB=0.841;AC=48;AF=0.857;AN=56;BaseQRankSum=-0.302;DP=837;FS=9.722;HRun=0;HaplotypeScore=280.1872;InbreedingCoeff=0.6746;MQ=47.25;MQ0=10;MQRankSum=-3.840;QD=14.63;ReadPosRankSum=1.455;VQSLOD=3.5273;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:62:99:0,107,1062	1/1:8,5:13:11.02:116,11,0	0/0:50,0:14:11.84:0,12,130	0/0:38,1:17:14.22:0,14,255	1/1:6,9:18:5.13:70,5,0	1/1:9,6:16:26.89:278,27,0	1/1:24,15:41:60:638,60,0	1/1:32,16:48:64.01:712,64,0	1/1:8,27:36:71.62:807,72,0	1/1:13,19:31:53.17:592,53,0	1/1:11,8:19:12.04:143,12,0	1/1:14,15:32:38.84:571,39,0	1/1:15,15:30:6.40:548,6,0	1/1:12,17:31:62.85:695,63,0	1/1:11,15:26:45.12:520,45,0	1/1:14,8:24:32.76:346,33,0	1/1:22,0:27:18.82:88,19,0	0/1:16,0:24:5.61:97,0,6	0/1:17,1:16:4.43:62,0,4	1/1:10,12:24:44.75:476,45,0	1/1:36,17:54:13.20:455,13,0	1/1:15,16:33:36.82:404,37,0	1/1:13,12:26:35.73:397,36,0	1/1:23,8:31:21.87:227,22,0	1/1:9,10:19:36.11:426,36,0	1/1:16,12:29:46.93:576,47,0	1/1:9,10:19:42.13:498,42,0	1/1:5,7:12:25.87:279,26,0
chr10	29594422	.	TAC	T	19543.04	PASS	AB=0.706;AC=43;AF=0.768;AN=56;BaseQRankSum=1.182;DP=1073;FS=0.986;HRun=0;HaplotypeScore=317.4700;InbreedingCoeff=0.8680;MQ=41.62;MQ0=13;MQRankSum=-4.263;QD=24.90;ReadPosRankSum=3.121;VQSLOD=4.8233;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:88.69:0,89,1482	1/1:2,10:12:30.10:390,30,0	0/0:67,0:30:53.09:0,53,889	0/0:51,1:25:5.02:0,5,413	1/1:7,11:18:26.99:310,27,0	1/1:6,14:20:45.15:584,45,0	1/1:12,37:49:86.72:1336,87,0	0/1:42,30:69:58.85:1372,0,59	0/0:51,0:51:99:0,110,1889	1/1:14,31:45:85.57:1256,86,0	1/1:3,10:13:24.08:308,24,0	1/1:7,35:42:99:1317,102,0	1/1:15,33:48:91.58:1397,92,0	1/1:13,32:45:99:1264,102,0	1/1:10,31:41:99:1245,99,0	1/1:8,35:43:96.58:1465,97,0	0/0:32,1:33:40.27:0,40,984	0/0:32,0:32:68.56:0,69,1000	1/1:22,9:25:53.94:624,54,0	1/1:10,12:22:42.05:507,42,0	1/1:48,34:81:12.59:1220,13,0	1/1:10,24:34:69:832,69,0	1/1:8,14:22:42.14:544,42,0	1/1:22,17:39:23.50:488,23,0	1/1:3,12:15:29.96:348,30,0	1/1:18,30:48:93.32:1439,93,0	1/1:15,18:33:74.57:923,75,0	1/1:4,7:11:32.41:375,32,0
chr10	29594432	.	CAT	C	8066.51	PASS	AB=0.997;AC=37;AF=0.661;AN=56;BaseQRankSum=7.529;DP=1065;FS=20.842;HRun=0;HaplotypeScore=353.1604;InbreedingCoeff=0.4509;MQ=43.81;MQ0=10;MQRankSum=-8.470;QD=10.16;ReadPosRankSum=9.865;VQSLOD=3.1826;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:53,1:54:82.44:0,82,1598	1/1:14,0:14:9.96:177,10,0	0/0:55,0:30:69.16:0,69,1068	0/0:42,0:17:14.53:0,15,478	0/1:20,0:20:17.51:109,0,18	1/1:19,1:20:22.61:237,23,0	1/1:47,1:48:54.48:566,54,0	0/1:67,0:64:76.99:465,0,77	0/0:52,0:52:99:0,112,2115	1/1:43,0:43:26.30:485,26,0	0/1:20,0:20:61.72:102,0,62	0/1:43,1:44:45.73:566,0,46	1/1:51,0:51:33.38:609,33,0	1/1:49,0:49:48.36:594,48,0	1/1:41,0:41:47.48:514,47,0	1/1:46,0:46:68.22:638,68,0	0/0:33,0:33:37.87:0,38,1050	0/0:35,0:35:75.52:0,76,1139	0/1:27,0:23:9.46:177,0,9	0/1:22,0:22:84.89:173,0,85	1/1:75,8:82:26.38:652,26,0	0/1:34,0:34:4.45:311,0,4	1/1:20,0:20:20.26:248,20,0	1/1:36,3:39:13.11:237,13,0	1/1:15,0:15:22.93:130,23,0	1/1:46,0:46:33.75:558,34,0	1/1:32,1:33:17.32:381,17,0	1/1:12,0:12:16.48:138,16,0
chr10	29594468	.	TAC	T	17031.59	PASS	AB=0.576;AC=43;AF=0.768;AN=56;BaseQRankSum=3.428;DP=966;FS=1.127;HRun=0;HaplotypeScore=302.6836;InbreedingCoeff=0.8954;MQ=47.06;MQ0=8;MQRankSum=-3.538;QD=23.59;ReadPosRankSum=-0.601;VQSLOD=4.4921;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:94.48:0,94,1509	1/1:5,7:12:27.08:332,27,0	0/0:41,0:20:26.63:0,27,372	0/0:36,0:12:20.08:0,20,250	1/1:2,17:19:45.06:520,45,0	1/1:7,12:19:39.11:470,39,0	1/1:19,22:41:66.16:796,66,0	1/1:10,42:52:99:1474,120,0	0/0:50,0:50:99:0,123,1994	1/1:22,28:50:96.23:1138,96,0	0/1:5,14:19:44.81:472,0,45	1/1:16,26:42:90.24:1086,90,0	1/1:13,33:47:99:1371,111,0	1/1:14,30:44:99:1203,99,0	1/1:19,25:44:75.22:914,75,0	1/1:16,34:50:99:1285,105,0	0/0:8,0:29:48.48:0,48,424	0/0:8,0:41:79.66:0,80,706	1/1:12,13:24:42.11:499,42,0	1/1:5,14:20:41.92:480,42,0	1/1:35,34:69:75.33:1119,75,0	1/1:12,16:28:54.17:661,54,0	1/1:5,12:17:36.07:426,36,0	1/1:13,16:30:31.72:453,32,0	1/1:5,11:16:36.11:444,36,0	1/1:15,23:38:72.22:892,72,0	1/1:9,20:29:62.56:812,63,0	1/1:6,5:11:15.05:186,15,0
chr10	29594512	.	CACATACACAT	C	4830.53	PASS	AB=0.945;AC=22;AF=0.393;AN=56;BaseQRankSum=7.164;DP=811;FS=28.866;HRun=0;HaplotypeScore=423.3724;InbreedingCoeff=-0.6474;MQ=44.97;MQ0=4;MQRankSum=-9.313;QD=8.47;ReadPosRankSum=-10.400;VQSLOD=0.3706;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,99,4128	0/1:10,0:10:42.09:42,0,213	0/0:54,0:34:66.09:0,66,2484	0/0:43,0:27:60.15:0,60,1861	0/1:20,1:21:90.62:91,0,353	0/1:9,1:10:87.41:87,0,271	0/1:31,2:33:99:214,0,325	0/1:63,3:66:99:916,0,2252	0/0:53,0:53:99:0,116,5288	0/1:34,3:37:99:267,0,1429	0/0:17,1:18:20.96:0,21,294	0/1:27,2:29:99:217,0,600	0/1:38,0:38:99:378,0,565	0/1:28,4:32:99:362,0,378	0/1:23,1:24:99:208,0,469	0/1:24,1:25:81.61:82,0,384	0/1:15,0:15:69.73:70,0,722	0/0:28,0:28:66.11:0,66,2465	0/1:29,1:29:99:200,0,1291	0/1:21,2:23:99:290,0,509	0/1:39,2:41:99:310,0,444	0/1:23,0:23:99:173,0,445	0/1:20,1:21:99:119,0,349	0/1:21,0:21:38.38:38,0,279	0/1:14,2:16:99:173,0,178	0/1:27,1:28:99:172,0,846	0/1:17,1:18:99:179,0,392	0/1:6,3:9:99:244,0,271
chr10	29594532	.	CACAAAACCATAT	C	13662.16	PASS	AB=0.811;AC=22;AF=0.393;AN=56;BaseQRankSum=10.417;DP=812;FS=79.339;HRun=0;HaplotypeScore=406.1830;InbreedingCoeff=-0.6471;MQ=45.46;MQ0=6;MQRankSum=-8.882;QD=24.31;ReadPosRankSum=9.513;VQSLOD=0.5763;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:70.97:0,71,4963	0/1:7,2:9:99:185,0,259	0/0:58,0:34:58.54:0,59,2535	0/0:50,0:31:76.59:0,77,2344	0/1:11,8:19:99:690,0,376	0/1:11,2:13:99:213,0,821	0/1:26,12:38:99:1042,0,1856	0/1:60,11:68:99:1672,0,2038	0/0:63,0:63:99:0,182,8079	0/1:27,8:35:99:951,0,1402	0/1:13,6:19:99:381,0,820	0/1:20,8:28:99:956,0,955	0/1:28,9:37:99:1007,0,848	0/1:17,8:25:99:612,0,1114	0/1:27,8:35:99:918,0,1465	0/1:20,4:24:99:388,0,993	0/0:14,0:14:28.25:0,28,906	0/0:18,0:18:45.12:0,45,1506	0/1:20,2:19:99:330,0,560	0/1:15,7:22:99:681,0,873	0/1:40,3:43:99:482,0,1445	0/1:13,8:21:99:733,0,548	0/1:13,8:22:99:684,0,787	0/1:14,2:17:99:191,0,349	0/1:10,4:14:99:369,0,514	0/1:20,6:26:99:768,0,1139	0/1:9,3:12:99:274,0,455	0/1:9,1:10:99:138,0,749
chr10	29594557	.	CCACATA	C	674.18	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=0.429;DP=1041;FS=1.462;HRun=0;HaplotypeScore=486.7233;InbreedingCoeff=0.9781;MQ=42.07;MQ0=13;MQRankSum=-1.853;QD=33.71;ReadPosRankSum=-2.597;VQSLOD=2.7816;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,105,3137	0/0:16,0:16:18.01:0,18,543	0/0:81,0:45:99:0,111,3025	0/0:77,0:37:62.11:0,62,1777	0/0:22,0:22:31.14:0,31,617	0/0:16,0:16:42.03:0,42,863	0/0:38,0:38:85.11:0,85,1446	0/0:76,0:72:99:0,166,3319	0/0:64,0:64:99:0,174,5544	0/0:39,0:39:95.27:0,95,1800	0/0:26,0:26:70.34:0,70,1244	0/0:31,0:31:62.49:0,62,1305	0/0:39,0:39:89.79:0,90,1610	0/0:41,0:41:63.65:0,64,1523	0/0:54,0:54:99:0,103,1919	0/0:39,0:39:82.40:0,82,1351	1/1:5,5:10:21.04:476,21,0	1/1:7,3:10:12.28:314,12,0	0/0:20,0:18:42.03:0,42,847	0/0:27,0:28:63.09:0,63,1403	0/0:72,0:72:55.17:0,55,1954	0/0:36,0:36:85.18:0,85,1312	0/0:26,0:26:44.63:0,45,892	0/0:31,0:32:48.13:0,48,813	0/0:26,0:27:47.63:0,48,1177	0/0:42,0:42:99:0,113,2374	0/0:20,0:20:59.71:0,60,1109	0/0:15,0:15:40.49:0,40,1016
chr10	29594562	.	T	TAC	19016.44	PASS	AB=0.700;AC=37;AF=0.661;AN=56;BaseQRankSum=-1.009;DP=1104;FS=5.755;HRun=0;HaplotypeScore=381.6498;InbreedingCoeff=0.2720;MQ=42.76;MQ0=13;MQRankSum=2.879;QD=23.19;ReadPosRankSum=-1.429;VQSLOD=4.1372;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:88.30:0,88,1153	0/1:8,8:17:49.70:288,0,50	0/0:82,0:41:64.30:0,64,986	0/0:80,0:35:34.02:0,34,627	0/1:14,10:24:6.62:450,0,7	1/1:3,20:23:42.14:679,42,0	1/1:21,18:39:43.16:964,43,0	0/1:51,27:74:99:1349,0,211	0/0:65,0:65:99:0,164,1996	0/1:19,20:39:97.67:899,0,98	1/1:10,20:30:15.42:853,15,0	1/1:13,23:36:46.33:971,46,0	1/1:13,27:40:41.50:1097,42,0	1/1:8,34:43:57.64:1067,58,0	1/1:10,47:57:23.76:1404,24,0	1/1:5,36:42:68.18:1273,68,0	0/0:12,0:12:20.13:0,20,118	0/1:8,0:8:24.51:46,0,25	1/1:13,7:18:12.81:353,13,0	1/1:16,15:31:14.11:688,14,0	0/1:29,48:78:74.35:1395,0,74	0/1:19,18:37:6.24:889,0,6	1/1:14,12:26:2.95:497,3,0	1/1:8,26:35:10.39:654,10,0	0/1:13,14:27:31.48:686,0,31	0/1:15,32:48:47.23:1098,0,47	1/1:5,18:23:39.58:794,40,0	1/1:4,12:18:33.66:624,34,0
chr10	29594637	.	AG	A	988.43	PASS	AB=0.831;AC=12;AF=0.214;AN=56;BaseQRankSum=10.385;DP=878;FS=96.644;HRun=1;HaplotypeScore=264.2120;InbreedingCoeff=-0.2657;MQ=54.90;MQ0=3;MQRankSum=-8.384;QD=3.51;ReadPosRankSum=-1.876;VQSLOD=0.0905;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,1:29:62.24:0,62,933	0/1:10,3:13:46.89:47,0,154	0/0:74,0:59:99:0,125,1550	0/0:98,0:82:99:0,217,2163	0/1:12,7:19:85.12:85,0,178	0/0:14,2:16:14.44:0,14,114	0/0:17,2:19:6.96:0,7,300	0/0:43,2:45:38.32:0,38,698	0/0:57,0:57:99:0,154,2000	0/1:27,8:35:99:177,0,409	0/1:20,5:26:99:99,0,291	0/0:21,2:23:44.14:0,44,368	0/0:27,3:30:25.80:0,26,485	0/0:19,4:23:39.78:0,40,335	0/0:31,8:40:38.17:0,38,447	0/0:38,3:41:19.49:0,19,701	0/0:15,0:15:36.12:0,36,574	0/0:12,1:13:36.12:0,36,574	0/0:19,0:19:31.77:0,32,226	0/1:13,6:18:99:193,0,130	0/0:52,2:54:96.70:0,97,708	0/1:21,7:28:99:199,0,334	0/1:19,5:24:99:126,0,383	0/1:28,2:30:5.24:5,0,201	0/1:17,3:20:74.71:75,0,225	0/1:29,4:34:69.40:69,0,452	0/1:20,1:23:5.17:5,0,311	0/1:9,2:11:53.76:54,0,141
chr10	29595894	.	CA	C	9308.02	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=8.879;DP=506;FS=9.468;HRun=9;HaplotypeScore=55.0822;InbreedingCoeff=0.9880;MQ=73.14;MQ0=0;MQRankSum=-4.665;QD=22.76;ReadPosRankSum=0.534;VQSLOD=5.3527;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:69.15:0,69,770	1/1:0,10:10:30.02:274,30,0	0/0:11,0:11:18.05:0,18,199	0/0:11,0:11:18.02:0,18,194	1/1:4,29:33:66.03:604,66,0	1/1:3,17:20:45.02:412,45,0	1/1:0,8:8:24.01:220,24,0	1/1:3,17:20:51.01:462,51,0	0/0:10,0:10:27.06:0,27,295	1/1:2,26:27:72.04:659,72,0	1/1:1,22:22:63.03:576,63,0	1/1:2,21:23:63.03:577,63,0	1/1:2,13:15:36.02:329,36,0	1/1:2,5:7:15:137,15,0	1/1:1,22:23:63.03:577,63,0	1/1:1,18:19:48.03:439,48,0	0/0:17,0:17:48.14:0,48,554	0/0:22,0:22:63.19:0,63,727	1/1:0,12:12:36.02:330,36,0	1/1:3,20:23:54.01:494,54,0	1/1:0,7:7:15.01:137,15,0	1/1:2,10:12:30.01:274,30,0	1/1:3,19:22:19.43:432,19,0	1/1:0,10:10:30.02:274,30,0	1/1:2,18:19:45.02:412,45,0	1/1:4,17:21:51:461,51,0	1/1:2,30:32:55.43:762,55,0	1/1:4,17:21:51.02:467,51,0
chr10	29596602	.	C	CTTGT	2933.85	PASS	AC=6;AF=0.500;AN=12;BaseQRankSum=-6.716;DP=161;FS=17.918;HRun=0;HaplotypeScore=139.9712;MQ=88.41;MQ0=0;MQRankSum=-0.688;QD=33.34;ReadPosRankSum=3.004;VQSLOD=2.2942;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,28:47:67.47:1586,67,0	./.	0/0:23,0:21:24.05:0,24,333	0/0:24,0:20:27.32:0,27,351	./.	./.	./.	./.	0/0:26,0:26:45.13:0,45,680	./.	./.	./.	./.	./.	./.	./.	1/1:5,17:22:37.07:873,37,0	1/1:10,8:19:27.09:572,27,0	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.
chr10	29596806	.	AG	A	1794.94	PASS	AC=4;AF=0.333;AN=12;BaseQRankSum=6.503;DP=167;FS=0.000;HRun=1;HaplotypeScore=126.7561;MQ=151.84;MQ0=0;MQRankSum=-5.388;QD=38.19;ReadPosRankSum=4.371;VQSLOD=3.1792;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:99:0,99,1578	./.	0/0:23,0:23:63.19:0,63,948	0/0:34,0:34:99:0,99,1482	./.	./.	./.	./.	0/0:30,0:30:90.31:0,90,1436	./.	./.	./.	./.	./.	./.	./.	1/1:0,25:25:75.25:1049,75,0	1/1:0,22:22:60.20:839,60,0	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.
chr10	29597312	.	G	GTTATATTATA	944.21	PASS	AB=1.000;AC=9;AF=0.750;AN=12;BaseQRankSum=-0.085;DP=89;FS=0.000;HRun=0;HaplotypeScore=115.0063;MQ=129.36;MQ0=0;MQRankSum=-1.104;QD=12.11;ReadPosRankSum=0.255;VQSLOD=2.1595;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:6,3:10:9.03:398,9,0	./.	0/0:11,0:11:2.68:0,3,44	0/1:24,0:17:2.26:2,0,27	./.	./.	./.	./.	1/1:3,0:6:3.01:31,3,0	./.	./.	./.	./.	./.	./.	./.	1/1:7,1:21:3.01:131,3,0	1/1:17,0:16:15.05:462,15,0	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.
chr10	29597472	.	G	GGTGTGT	341.63	PASS	AB=0.817;AC=5;AF=0.63;AN=8;BaseQRankSum=-0.495;DP=148;FS=0.000;HRun=0;HaplotypeScore=115.6936;MQ=70.84;MQ0=14;MQRankSum=-1.550;QD=3.67;ReadPosRankSum=-1.286;VQSLOD=1.8581;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:21,0:26:33.29:33,0,49	./.	./.	./.	./.	./.	./.	./.	1/1:14,8:21:6.02:193,6,0	./.	./.	./.	./.	./.	./.	./.	0/1:15,0:24:3.08:131,0,3	0/1:17,0:19:9.89:57,0,10	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.
chr10	29598137	.	A	ACC	801.05	PASS	AC=4;AF=0.333;AN=12;BaseQRankSum=7.067;DP=124;FS=6.251;HRun=1;HaplotypeScore=117.8802;MQ=145.73;MQ0=0;MQRankSum=-6.870;QD=33.38;ReadPosRankSum=0.539;VQSLOD=3.6929;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,99,1491	./.	0/0:14,0:14:36.10:0,36,483	0/0:26,0:26:68.93:0,69,955	./.	./.	./.	./.	0/0:26,0:26:78.26:0,78,1192	./.	./.	./.	./.	./.	./.	./.	1/1:3,7:10:27.07:359,27,0	1/1:6,8:14:39.13:535,39,0	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.
chr10	29598141	.	G	GTT	607.55	PASS	AC=4;AF=0.333;AN=12;BaseQRankSum=6.146;DP=117;FS=1.072;HRun=0;HaplotypeScore=105.2123;MQ=149.45;MQ0=0;MQRankSum=-5.744;QD=31.98;ReadPosRankSum=1.035;VQSLOD=5.7754;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:93.32:0,93,1502	./.	0/0:14,0:14:41.93:0,42,631	0/0:25,0:25:63.18:0,63,997	./.	./.	./.	./.	0/0:27,0:27:75.26:0,75,1223	./.	./.	./.	./.	./.	./.	./.	1/1:3,7:10:24.07:340,24,0	1/1:1,8:9:24.08:361,24,0	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.
chr10	29600758	.	A	AT	2062.81	PASS	AC=6;AF=0.500;AN=12;BaseQRankSum=1.897;DP=171;FS=5.093;HRun=7;HaplotypeScore=143.2847;MQ=128.53;MQ0=1;MQRankSum=-5.047;QD=20.22;ReadPosRankSum=2.577;VQSLOD=2.1634;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:12,42:54:99:1468,135,0	./.	0/0:22,0:22:44.34:0,44,478	0/0:17,0:17:29.58:0,30,285	./.	./.	./.	./.	0/0:30,0:30:84.12:0,84,805	./.	./.	./.	./.	./.	./.	./.	1/1:4,0:27:75.27:415,75,0	1/1:2,0:20:51.88:278,52,0	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.
chr10	29600817	.	C	CAAG	5534.88	PASS	AC=6;AF=0.500;AN=12;BaseQRankSum=7.064;DP=190;FS=3.536;HRun=0;HaplotypeScore=186.1624;MQ=149.43;MQ0=0;MQRankSum=-9.393;QD=53.74;ReadPosRankSum=3.027;VQSLOD=5.9805;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,45:59:99:3075,141,0	./.	0/0:27,0:27:61.70:0,62,1208	0/0:34,0:34:99:0,100,1532	./.	./.	./.	./.	0/0:26,0:26:75.26:0,75,1274	./.	./.	./.	./.	./.	./.	./.	1/1:9,18:27:69.15:1482,69,0	1/1:5,11:17:45.15:979,45,0	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.
chr10	29601082	.	TC	T	1655.83	PASS	AC=6;AF=0.500;AN=12;BaseQRankSum=-0.284;DP=121;FS=11.819;HRun=6;HaplotypeScore=89.4704;MQ=102.37;MQ0=0;MQRankSum=-2.183;QD=23.65;ReadPosRankSum=3.204;VQSLOD=2.7909;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,29:32:77.93:818,78,0	./.	0/0:12,1:11:18.06:0,18,227	0/0:18,0:18:21.87:0,22,413	./.	./.	./.	./.	0/0:20,0:20:60.19:0,60,787	./.	./.	./.	./.	./.	./.	./.	1/1:0,8:8:24.06:258,24,0	1/1:2,28:30:63.16:677,63,0	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.
chr10	29602599	.	GCATGCACACACACACACACACACA	G	920.65	PASS	AC=6;AF=0.500;AN=12;BaseQRankSum=4.452;DP=117;FS=12.878;HRun=0;HaplotypeScore=192.8433;MQ=55.54;MQ0=12;MQRankSum=-3.679;QD=17.70;ReadPosRankSum=1.484;VQSLOD=1.2291;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:8,0:27:18.06:425,18,0	./.	0/0:18,0:5:5.75:0,6,61	0/0:18,0:3:3:0,3,28	./.	./.	./.	./.	0/0:26,0:26:54.60:0,55,3356	./.	./.	./.	./.	./.	./.	./.	1/1:2,13:15:3.01:150,3,0	1/1:1,9:10:9.03:434,9,0	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.
chr10	29602601	.	ATG	A	68.34	PASS	AB=0.806;AC=5;AF=0.417;AN=12;BaseQRankSum=3.500;DP=112;FS=5.302;HRun=0;HaplotypeScore=109.6129;MQ=49.68;MQ0=12;MQRankSum=-3.137;QD=1.39;ReadPosRankSum=2.048;VQSLOD=1.8681;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:19,6:25:1.58:63,0,2	./.	0/0:17,0:3:5.75:0,6,61	0/0:18,0:3:3.47:0,3,29	./.	./.	./.	./.	0/0:26,0:26:55.21:0,55,795	./.	./.	./.	./.	./.	./.	./.	1/1:13,1:14:0.89:2,1,0	1/1:10,0:10:8.97:81,9,0	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.
chr10	29602603	.	G	GCACA	453.80	PASS	AB=1.000;AC=5;AF=0.63;AN=8;BaseQRankSum=-2.034;DP=116;FS=0.000;HRun=0;HaplotypeScore=122.9501;MQ=43.16;MQ0=14;MQRankSum=1.664;QD=6.48;ReadPosRankSum=-0.185;VQSLOD=2.4536;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:26:4.14:27,0,4	./.	./.	./.	./.	./.	./.	./.	1/1:15,11:30:20.55:498,21,0	./.	./.	./.	./.	./.	./.	./.	1/1:14,0:14:0.89:2,1,0	0/0:10,0:10:6.01:0,6,56	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.
chr10	29602919	.	T	TG	952.70	PASS	AC=6;AF=0.500;AN=12;BaseQRankSum=6.324;DP=105;FS=17.506;HRun=1;HaplotypeScore=97.6713;MQ=176.96;MQ0=0;MQRankSum=-5.459;QD=30.73;ReadPosRankSum=2.342;VQSLOD=2.2273;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,5:6:9.03:134,9,0	./.	0/0:23,0:23:60.18:0,60,756	0/0:29,0:29:74.09:0,74,855	./.	./.	./.	./.	0/0:22,0:22:60.16:0,60,747	./.	./.	./.	./.	./.	./.	./.	1/1:2,11:13:33.11:492,33,0	1/1:3,9:12:33.01:422,33,0	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.
chr10	29602961	.	AACGAGGTGTGATGATGCTATTTAGTTCTGTTTTCAAAGG	A	925.06	PASS	AC=6;AF=0.500;AN=12;BaseQRankSum=3.730;DP=105;FS=0.000;HRun=0;HaplotypeScore=468.7148;MQ=208.00;MQ0=0;MQRankSum=-3.602;QD=57.82;ReadPosRankSum=1.158;VQSLOD=0.6567;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:4,2:6:6.02:375,6,0	./.	0/0:33,0:33:96.31:0,96,6558	0/0:37,0:37:95.54:0,96,6339	./.	./.	./.	./.	0/0:19,0:19:54.17:0,54,6613	./.	./.	./.	./.	./.	./.	./.	1/1:3,2:5:6.02:335,6,0	1/1:4,1:5:3.01:303,3,0	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.
chr10	29603026	.	C	CTGTGTGTG	366.65	PASS	AB=1.000;AC=6;AF=0.75;AN=8;BaseQRankSum=-0.696;DP=121;FS=0.000;HRun=0;HaplotypeScore=218.9158;MQ=81.05;MQ0=15;MQRankSum=1.044;QD=6.43;ReadPosRankSum=1.393;VQSLOD=2.5107;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:23:0.01:0,0,0	./.	./.	./.	./.	./.	./.	./.	1/1:7,8:17:9.03:221,9,0	./.	./.	./.	./.	./.	./.	./.	0/1:12,0:12:14.78:118,0,15	1/1:5,0:5:6.02:97,6,0	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.
chr10	29603060	.	G	GCA	139.81	PASS	AB=0.823;AC=2;AF=0.167;AN=12;BaseQRankSum=1.131;DP=118;FS=7.130;HRun=0;HaplotypeScore=170.7103;MQ=57.73;MQ0=14;MQRankSum=-2.301;QD=5.83;ReadPosRankSum=1.833;VQSLOD=2.6160;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,3:28:20.97:0,21,300	./.	0/0:18,0:8:24.05:0,24,335	0/0:27,0:16:45.15:0,45,698	./.	./.	./.	./.	0/0:18,0:18:13.35:0,13,243	./.	./.	./.	./.	./.	./.	./.	0/1:9,5:13:99:180,0,146	0/1:9,1:10:34.89:35,0,202	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.
chr10	29603065	.	TGC	T	339.12	PASS	AC=6;AF=0.500;AN=12;BaseQRankSum=3.567;DP=121;FS=33.291;HRun=0;HaplotypeScore=169.7721;MQ=68.13;MQ0=11;MQRankSum=-2.447;QD=6.28;ReadPosRankSum=2.609;VQSLOD=1.1906;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:22,9:31:32.37:250,32,0	./.	0/0:20,0:10:22.73:0,23,220	0/0:28,0:20:49.70:0,50,454	./.	./.	./.	./.	0/0:16,0:16:32.04:0,32,268	./.	./.	./.	./.	./.	./.	./.	1/1:12,2:13:7.26:64,7,0	1/1:8,1:9:18.60:121,19,0	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.
chr10	29603099	.	C	CT	2570.92	PASS	AC=6;AF=0.500;AN=12;BaseQRankSum=5.772;DP=142;FS=1.406;HRun=1;HaplotypeScore=168.8963;MQ=141.99;MQ0=0;MQRankSum=-8.997;QD=40.81;ReadPosRankSum=4.474;VQSLOD=3.0955;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,35:35:99:1501,102,0	./.	0/0:29,0:30:70.24:0,70,806	0/0:33,0:33:99:0,99,1216	./.	./.	./.	./.	0/0:16,0:16:42.14:0,42,545	./.	./.	./.	./.	./.	./.	./.	1/1:0,15:15:42.14:629,42,0	1/1:0,13:13:36.12:539,36,0	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.
chr10	29603701	.	A	AC	1616.47	PASS	AC=6;AF=0.500;AN=12;BaseQRankSum=7.575;DP=125;FS=0.000;HRun=0;HaplotypeScore=160.4454;MQ=40.34;MQ0=6;MQRankSum=-3.634;QD=22.77;ReadPosRankSum=2.676;VQSLOD=3.7869;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,0:36:82.47:550,82,0	./.	0/0:14,0:6:18.06:0,18,237	0/0:18,0:5:15.05:0,15,206	./.	./.	./.	./.	0/0:22,0:22:66.20:0,66,891	./.	./.	./.	./.	./.	./.	./.	1/1:2,21:23:18.91:722,19,0	1/1:1,11:12:33.11:441,33,0	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.
chr10	29606198	.	C	CGTGTGTGT	75.31	PASS	AB=1.000;AC=5;AF=0.417;AN=12;BaseQRankSum=2.386;DP=134;FS=0.000;HRun=0;HaplotypeScore=160.0989;MQ=90.52;MQ0=5;MQRankSum=-0.795;QD=0.94;ReadPosRankSum=-1.941;VQSLOD=2.2863;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:18,8:32:0.47:1,0,0	./.	0/0:22,0:17:11.95:0,12,117	0/1:22,0:15:13.73:14,0,67	./.	./.	./.	./.	1/1:10,0:26:7.46:138,7,0	./.	./.	./.	./.	./.	./.	./.	0/0:16,0:16:26.54:0,27,359	0/0:11,0:11:1.96:0,2,178	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.
chr10	29607432	.	T	TACACACAC	8321.80	PASS	AB=1.000;AC=43;AF=0.796;AN=54;BaseQRankSum=-6.292;DP=516;FS=19.701;HRun=0;HaplotypeScore=130.9124;InbreedingCoeff=0.6370;MQ=53.47;MQ0=8;MQRankSum=2.637;QD=20.25;ReadPosRankSum=-0.642;VQSLOD=3.0547;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:28:9.01:118,9,0	1/1:9,0:9:9.03:137,9,0	0/0:10,0:4:6.01:0,6,78	0/0:15,0:9:12.77:0,13,216	1/1:1,8:13:3.01:121,3,0	./.	0/1:17,0:17:11.99:286,0,12	1/1:34,0:29:65.97:770,66,0	0/0:18,0:18:17.99:0,18,266	1/1:3,12:16:26.93:484,27,0	1/1:1,12:16:6.02:254,6,0	1/1:20,0:20:29.92:465,30,0	1/1:2,20:25:12.04:495,12,0	1/1:1,11:14:3.01:127,3,0	1/1:3,18:23:12.04:508,12,0	1/1:2,17:20:9.03:381,9,0	0/0:25,0:25:9.87:0,10,133	0/0:21,0:20:11.06:0,11,124	1/1:8,8:16:27.56:532,28,0	1/1:3,16:21:9.03:375,9,0	1/1:20,0:20:33.02:505,33,0	1/1:1,10:11:3.01:127,3,0	1/1:13,0:13:24.05:360,24,0	1/1:19,0:19:15.05:289,15,0	1/1:3,17:23:15.05:560,15,0	1/1:4,12:20:36.05:796,36,0	1/1:3,13:17:9.03:381,9,0	1/1:1,8:11:6.02:253,6,0
chr10	29607444	.	CATACAT	C	751.74	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=-1.112;DP=513;FS=3.390;HRun=0;HaplotypeScore=143.8747;InbreedingCoeff=0.5076;MQ=51.81;MQ0=8;MQRankSum=-0.475;QD=6.71;ReadPosRankSum=0.469;VQSLOD=2.7072;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:28:12.13:12,0,175	0/1:9,0:9:12.48:12,0,109	0/0:10,0:7:12.65:0,13,101	0/0:16,0:10:21.27:0,21,239	0/0:14,0:14:15.03:0,15,215	0/0:14,0:14:12.03:0,12,183	0/0:17,0:17:0.99:0,1,364	0/0:38,0:33:36.65:0,37,1218	1/1:1,17:18:17.93:382,18,0	0/0:13,0:12:24.93:0,25,535	0/0:17,0:17:21.05:0,21,416	0/0:23,0:23:32.07:0,32,472	0/0:25,0:24:21.07:0,21,464	0/0:16,0:16:12.04:0,12,212	0/0:22,0:22:15.05:0,15,360	0/0:18,0:18:12.04:0,12,322	1/1:2,20:23:8.52:164,9,0	1/1:1,18:19:15.05:322,15,0	0/0:17,0:14:40.28:0,40,735	0/0:19,0:20:15.05:0,15,377	0/0:20,0:20:14.62:0,15,785	0/0:11,0:11:6.02:0,6,131	0/1:13,0:13:2.59:3,0,474	0/0:18,0:18:20.75:0,21,357	0/0:20,0:20:21.07:0,21,484	0/0:22,0:22:8.70:0,9,1310	0/0:18,0:18:18.06:0,18,473	0/0:10,0:10:15.04:0,15,256
chr10	29608314	.	AAAAT	A	1169.26	PASS	AC=2;AF=0.037;AN=54;BaseQRankSum=3.204;DP=388;FS=40.119;HRun=0;HaplotypeScore=82.2260;InbreedingCoeff=0.5927;MQ=68.41;MQ0=1;MQRankSum=-2.957;QD=36.54;ReadPosRankSum=1.704;VQSLOD=1.3539;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,25:32:81.61:1263,82,0	0/0:7,0:7:17.99:0,18,318	0/0:7,0:6:6.49:0,6,101	0/0:9,0:9:11.62:0,12,187	0/0:21,0:21:45.15:0,45,1012	0/0:20,0:20:36.12:0,36,819	0/0:3,0:3:3.01:0,3,62	0/0:28,0:28:63.08:0,63,1138	0/0:10,0:10:24.08:0,24,545	0/0:11,0:11:30.09:0,30,606	0/0:8,0:8:24:0,24,537	0/0:14,0:14:18.03:0,18,313	0/0:11,0:11:21.06:0,21,436	0/0:10,0:10:21.06:0,21,411	0/0:13,0:13:33.02:0,33,630	0/0:7,0:7:14.88:0,15,281	0/0:31,0:30:39.11:0,39,857	0/0:25,0:25:42.06:0,42,859	0/0:22,0:22:59.23:0,59,1325	0/0:16,0:16:36.11:0,36,789	./.	0/0:4,0:4:9.03:0,9,191	0/0:5,0:5:8.95:0,9,156	0/0:4,0:4:3.01:0,3,75	0/0:20,0:20:42.14:0,42,960	0/0:13,0:13:33.09:0,33,684	0/0:20,0:20:33.10:0,33,664	0/0:14,0:14:18.87:0,19,458
chr10	29608348	.	CACACACACAG	C	1053.61	PASS	AB=0.959;AC=13;AF=0.241;AN=54;BaseQRankSum=-4.802;DP=466;FS=6.196;HRun=0;HaplotypeScore=153.4915;InbreedingCoeff=-0.0252;MQ=54.43;MQ0=12;MQRankSum=1.512;QD=4.97;ReadPosRankSum=-0.525;VQSLOD=1.9831;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:78.06:0,78,1470	0/0:11,0:11:3.47:0,3,18	0/0:24,0:11:26.88:0,27,641	0/1:23,0:11:11.37:11,0,536	0/1:23,0:23:6.52:7,0,19	0/0:19,0:19:10.28:0,10,27	0/1:10,0:10:17.88:25,0,18	0/1:29,0:29:99:120,0,234	0/0:20,0:20:42.14:0,42,1300	0/1:13,0:13:5.83:6,0,83	0/0:11,0:11:1.55:0,2,4	0/0:14,0:14:1.25:0,1,3	0/1:5,0:4:25.61:50,0,26	0/0:8,0:8:11.93:0,12,127	0/0:9,0:9:11.10:0,11,112	0/1:10,0:10:2.24:30,0,2	1/1:5,27:31:14.98:375,15,0	0/1:4,20:24:38.63:456,0,39	0/1:14,0:14:49.51:50,0,96	0/0:12,0:12:11.76:0,12,43	./.	0/0:10,0:10:11.44:0,11,77	0/0:10,0:10:8.31:0,8,47	0/0:11,0:10:4.26:0,4,45	0/0:24,0:24:26.41:0,26,150	0/1:16,0:16:56.91:57,0,111	0/0:18,0:18:8.81:0,9,23	0/1:12,0:12:1.04:13,0,1
chr10	29608350	.	CACACACAG	C	3455.64	PASS	AB=1.000;AC=44;AF=0.815;AN=54;BaseQRankSum=2.246;DP=487;FS=0.573;HRun=0;HaplotypeScore=136.2043;InbreedingCoeff=0.3535;MQ=54.39;MQ0=13;MQRankSum=-4.313;QD=9.14;ReadPosRankSum=3.330;VQSLOD=2.5673;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:70.13:0,70,975	1/1:12,0:12:17.49:131,17,0	0/0:28,0:13:32.91:0,33,616	0/1:27,0:13:16.09:16,0,493	1/1:23,0:23:14.18:92,14,0	1/1:19,0:19:23.92:186,24,0	1/1:9,1:10:23.40:223,23,0	1/1:30,0:30:12.80:372,13,0	0/0:20,0:20:42.14:0,42,948	1/1:13,0:13:24.75:206,25,0	1/1:11,0:11:2.99:23,3,0	1/1:14,0:14:2.99:23,3,0	1/1:6,1:5:11.42:132,11,0	0/1:8,0:8:32.30:77,0,32	0/1:11,0:11:67.18:114,0,67	1/1:11,1:12:14.74:187,15,0	1/1:31,0:30:14.98:258,15,0	1/1:24,0:24:0.53:284,1,0	1/1:15,0:15:6.20:149,6,0	1/1:11,0:11:20.03:134,20,0	./.	1/1:10,0:10:0.48:46,0,0	1/1:10,0:10:8:51,8,0	0/1:11,0:10:9.58:17,0,10	1/1:23,0:23:19.90:210,20,0	1/1:15,0:15:25.21:183,25,0	1/1:19,0:19:21.31:160,21,0	1/1:11,1:12:14.98:183,15,0
chr10	29608352	.	CACACAG	C	8241.05	PASS	AB=0.779;AC=45;AF=0.833;AN=54;BaseQRankSum=-5.783;DP=489;FS=2.034;HRun=0;HaplotypeScore=107.6984;InbreedingCoeff=0.4986;MQ=54.21;MQ0=16;MQRankSum=-2.664;QD=21.92;ReadPosRankSum=1.942;VQSLOD=4.7263;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:22.22:0,22,493	1/1:0,12:12:18.06:399,18,0	0/0:28,0:13:25.99:0,26,464	0/1:28,0:13:37.55:38,0,380	1/1:2,21:23:14.93:276,15,0	1/1:1,18:19:24.08:551,24,0	1/1:1,9:10:24.08:507,24,0	1/1:6,27:33:79.68:876,80,0	0/0:22,0:22:42.14:0,42,615	1/1:0,13:13:32.97:440,33,0	1/1:0,9:9:3.01:69,3,0	1/1:0,14:14:3.01:69,3,0	1/1:7,0:5:11.92:112,12,0	0/1:5,3:8:9.83:281,0,10	0/1:4,7:11:34.45:391,0,34	1/1:2,10:12:15:321,15,0	1/1:30,0:29:14.98:202,15,0	1/1:25,0:25:19.39:257,19,0	1/1:3,10:13:29.59:339,30,0	1/1:0,11:11:21.07:455,21,0	./.	1/1:0,10:10:15.05:275,15,0	1/1:0,10:10:12.04:234,12,0	1/1:4,8:11:5.69:79,6,0	1/1:0,20:20:42.14:853,42,0	1/1:0,14:14:32.93:436,33,0	1/1:0,19:19:21.37:482,21,0	1/1:2,10:12:15.04:300,15,0
chr10	29608358	.	GACAC	G	2733.83	PASS	AB=0.969;AC=38;AF=0.679;AN=56;BaseQRankSum=6.591;DP=503;FS=0.000;HRun=0;HaplotypeScore=117.2312;InbreedingCoeff=-0.0049;MQ=55.03;MQ0=16;MQRankSum=-6.032;QD=6.42;ReadPosRankSum=5.076;VQSLOD=2.1447;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:19,24:45:21.74:617,0,22	1/1:12,0:12:17.64:131,18,0	0/0:35,0:14:20.51:0,21,400	0/1:35,0:14:6.42:6,0,311	1/1:21,0:21:11.15:81,11,0	1/1:18,0:18:23.94:190,24,0	1/1:11,0:11:2.65:151,3,0	0/1:32,0:32:31.84:80,0,32	0/0:3,0:23:38.48:0,38,175	0/1:14,0:14:11.97:80,0,12	1/1:9,0:9:2.99:24,3,0	0/1:15,0:15:17.76:18,0,18	1/1:7,0:5:2.99:25,3,0	0/1:11,0:11:7.83:82,0,8	0/1:12,0:12:32.86:121,0,33	1/1:11,0:11:14.71:119,15,0	0/1:30,0:29:7.97:89,0,8	0/1:23,0:23:2.98:112,0,3	0/1:11,0:11:5.17:82,0,5	0/1:12,0:12:0.65:118,0,1	0/0:19,0:18:2.99:0,3,24	1/1:11,0:11:10.85:65,11,0	1/1:10,0:10:9.62:59,10,0	1/1:11,0:10:6:57,6,0	1/1:20,0:20:35.35:245,35,0	0/1:15,0:15:13.49:78,0,13	1/1:19,0:19:20.86:166,21,0	1/1:11,0:11:13.78:99,14,0
chr10	29608491	.	CT	C	17558.29	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=1.357;DP=580;FS=0.956;HRun=2;HaplotypeScore=63.8586;InbreedingCoeff=0.9966;MQ=94.03;MQ0=2;MQRankSum=-9.608;QD=35.19;ReadPosRankSum=5.151;VQSLOD=5.1170;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,43:44:99:1441,111,0	1/1:0,8:8:24.08:311,24,0	0/0:28,0:28:78.26:0,78,1128	0/0:30,0:29:87.10:0,87,1209	1/1:0,9:9:27.09:350,27,0	1/1:0,10:10:27.09:351,27,0	1/1:0,22:22:60.19:778,60,0	1/1:0,34:34:99:1252,102,0	0/0:23,0:23:69.22:0,69,1015	1/1:2,12:14:36.07:444,36,0	1/1:0,14:14:36.12:467,36,0	1/1:1,20:21:57.19:740,57,0	1/1:0,12:11:33.11:428,33,0	1/1:0,25:25:57.19:740,57,0	1/1:0,19:18:51.17:662,51,0	1/1:1,12:12:30.10:390,30,0	1/1:0,35:35:96.31:1246,96,0	1/1:0,28:28:75.24:973,75,0	1/1:0,18:18:51.17:657,51,0	1/1:0,13:13:36.12:466,36,0	1/1:1,47:48:99:1675,129,0	1/1:0,9:9:27.09:350,27,0	1/1:0,9:9:27.09:351,27,0	1/1:0,29:29:87.28:1130,87,0	1/1:0,10:10:24.08:312,24,0	1/1:0,19:19:54.15:683,54,0	1/1:0,24:24:69.22:893,69,0	1/1:0,12:12:36.12:467,36,0
chr10	29608819	.	C	CAG	33832.62	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-11.436;DP=846;FS=4.170;HRun=0;HaplotypeScore=97.0333;InbreedingCoeff=0.9970;MQ=75.58;MQ0=4;MQRankSum=-7.718;QD=44.93;ReadPosRankSum=4.364;VQSLOD=6.3294;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,63:68:99:3193,181,0	1/1:0,10:9:18.06:319,18,0	0/0:27,0:26:69.23:0,69,938	0/0:31,0:30:47.53:0,48,660	1/1:3,17:20:42.14:745,42,0	1/1:0,17:17:48.16:852,48,0	1/1:2,27:29:75.26:1331,75,0	1/1:3,32:36:96.32:1675,96,0	0/0:35,0:35:87.29:0,87,1193	1/1:2,24:25:69.21:1168,69,0	1/1:0,16:16:42.14:746,42,0	1/1:4,41:45:99:2073,117,0	1/1:5,26:32:72.25:1273,72,0	1/1:2,28:30:84.29:1490,84,0	1/1:1,31:32:87.30:1544,87,0	1/1:3,28:31:69.06:1224,69,0	1/1:1,28:30:78.27:1384,78,0	1/1:4,28:33:84.29:1491,84,0	1/1:1,21:22:63.16:1018,63,0	1/1:2,20:22:51.17:899,51,0	1/1:2,60:63:99:3088,175,0	1/1:0,22:22:48.16:851,48,0	1/1:2,14:16:42.14:745,42,0	1/1:3,46:48:99:1969,111,0	1/1:2,18:21:51.17:905,51,0	1/1:0,29:29:87.28:1514,87,0	1/1:6,36:42:96.33:1697,96,0	1/1:0,12:12:36.12:638,36,0
chr10	29611099	.	T	TA	14231.27	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-4.313;DP=582;FS=1.483;HRun=7;HaplotypeScore=83.8926;InbreedingCoeff=0.9931;MQ=84.71;MQ0=0;MQRankSum=-3.379;QD=29.96;ReadPosRankSum=-0.691;VQSLOD=4.6975;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:33.05:0,33,318	1/1:0,4:4:12.04:145,12,0	0/0:23,0:23:44.20:0,44,440	0/0:14,0:14:30.02:0,30,287	1/1:3,26:29:66.20:797,66,0	1/1:2,24:26:66.18:785,66,0	1/1:1,18:19:45.14:544,45,0	1/1:1,24:25:69.17:807,69,0	0/0:17,0:17:48.07:0,48,464	1/1:2,19:21:54.17:652,54,0	1/1:1,17:18:51.16:616,51,0	1/1:3,21:24:51.16:615,51,0	1/1:3,27:30:69.12:827,69,0	1/1:4,22:26:60.18:725,60,0	1/1:2,19:21:51.16:616,51,0	1/1:2,30:32:78.24:942,78,0	0/0:25,0:25:66.10:0,66,636	0/0:16,0:16:45.04:0,45,427	1/1:2,22:24:66.19:785,66,0	1/1:0,24:24:72.22:869,72,0	1/1:3,21:24:51.16:616,51,0	1/1:1,19:20:51.07:597,51,0	1/1:3,17:20:47.88:559,48,0	1/1:0,9:9:24.07:290,24,0	1/1:0,17:17:36.10:425,36,0	1/1:2,18:20:54.16:642,54,0	1/1:3,28:31:81.25:979,81,0	1/1:0,11:11:33.10:399,33,0
chr10	29611806	.	TA	T	967.41	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.694;DP=662;FS=8.074;HRun=6;HaplotypeScore=63.3769;InbreedingCoeff=0.8686;MQ=83.05;MQ0=0;MQRankSum=-3.751;QD=24.19;ReadPosRankSum=1.700;VQSLOD=3.5043;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,39:40:99:1062,99,0	0/0:9,0:9:27.07:0,27,338	0/0:24,0:23:56.49:0,56,669	0/0:19,0:19:45.87:0,46,526	0/0:37,0:37:99:0,108,1364	0/0:19,0:19:57.18:0,57,732	0/0:11,1:12:3.97:0,4,399	0/0:28,0:28:81.20:0,81,946	0/0:21,0:21:63.19:0,63,808	0/0:25,0:25:69.21:0,69,868	0/0:21,0:21:63.17:0,63,782	0/0:27,0:27:78.23:0,78,985	0/0:31,0:31:87.26:0,87,1110	0/0:24,0:24:69.18:0,69,871	0/0:23,0:23:63.20:0,63,823	0/0:24,0:24:69.22:0,69,902	0/0:24,0:24:66.19:0,66,845	0/0:18,0:18:48.12:0,48,609	0/0:31,0:31:84.24:0,84,1059	0/0:27,0:27:75.23:0,75,965	0/0:16,0:16:39.13:0,39,510	0/0:19,0:19:57.16:0,57,716	0/0:21,0:21:63.14:0,63,775	0/0:21,0:21:57.19:0,57,745	0/0:30,0:30:90.28:0,90,1164	0/0:22,0:22:66.21:0,66,851	0/0:31,0:31:93.30:0,93,1215	0/0:18,0:18:54.18:0,54,705
chr10	29614459	.	C	CA	19498.24	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-4.818;DP=688;FS=2.043;HRun=6;HaplotypeScore=77.4551;InbreedingCoeff=0.9996;MQ=89.56;MQ0=0;MQRankSum=-7.936;QD=32.88;ReadPosRankSum=3.678;VQSLOD=4.9291;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:56.95:0,57,551	1/1:2,11:13:33.11:415,33,0	0/0:28,0:29:76.90:0,77,727	0/0:25,0:25:59.84:0,60,564	1/1:2,34:36:99:1240,105,0	1/1:1,29:30:84.27:1056,84,0	1/1:2,20:22:54.17:679,54,0	1/1:5,26:31:78.22:955,78,0	0/0:16,0:16:45.10:0,45,459	1/1:5,20:25:66.21:823,66,0	1/1:1,24:25:66.17:812,66,0	1/1:3,24:27:66.21:830,66,0	1/1:2,17:19:51.16:642,51,0	1/1:1,29:30:90.28:1120,90,0	1/1:5,28:33:84.27:1057,84,0	1/1:0,23:23:66.21:830,66,0	1/1:1,22:23:54.17:679,54,0	1/1:1,8:9:27.05:323,27,0	1/1:3,15:18:48.15:604,48,0	1/1:4,27:31:81.14:960,81,0	1/1:0,13:13:39.12:491,39,0	1/1:3,18:21:54.17:679,54,0	1/1:2,24:26:72.23:899,72,0	1/1:1,17:18:45.14:566,45,0	1/1:2,22:24:60.19:755,60,0	1/1:4,34:38:99:1271,102,0	1/1:3,40:42:99:1283,102,0	1/1:0,15:15:42.13:528,42,0
chr10	29615596	.	T	TGG	26420.06	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-5.655;DP=651;FS=8.387;HRun=4;HaplotypeScore=80.0493;InbreedingCoeff=0.9904;MQ=79.17;MQ0=0;MQRankSum=-4.584;QD=47.01;ReadPosRankSum=3.542;VQSLOD=3.4181;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:78.24:0,78,1024	1/1:0,9:9:24.08:432,24,0	0/0:25,0:24:22:0,22,568	0/0:19,0:20:13.07:0,13,373	1/1:3,22:25:60.21:1078,60,0	1/1:1,25:26:72.25:1297,72,0	1/1:3,23:26:63.21:1111,63,0	1/1:2,26:28:78.27:1399,78,0	0/0:17,0:17:48.16:0,48,640	1/1:1,33:34:99:1766,99,0	1/1:2,21:23:63.22:1134,63,0	1/1:2,26:30:57.20:1027,57,0	1/1:1,23:24:66.23:1182,66,0	1/1:1,21:22:60.21:1080,60,0	1/1:1,29:30:81.28:1456,81,0	1/1:1,25:27:81.28:1449,81,0	1/1:1,25:26:66.23:1189,66,0	1/1:1,9:10:21.07:378,21,0	1/1:5,25:30:78.19:1334,78,0	1/1:1,22:23:63.17:1096,63,0	1/1:2,19:23:57.20:1022,57,0	1/1:0,12:13:36.12:645,36,0	1/1:0,22:22:59.91:1077,60,0	1/1:4,20:24:57.20:1026,57,0	1/1:1,17:18:51.17:919,51,0	1/1:2,22:25:72.23:1238,72,0	1/1:0,30:31:81.28:1439,81,0	1/1:0,12:13:36.12:649,36,0
chr10	29616574	.	T	TGA	2213.36	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-9.060;DP=797;FS=0.000;HRun=0;HaplotypeScore=87.8099;InbreedingCoeff=0.9969;MQ=84.79;MQ0=1;MQRankSum=-6.167;QD=40.99;ReadPosRankSum=1.726;VQSLOD=5.5012;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,50:53:99:2308,126,0	0/0:10,0:10:27.09:0,27,387	0/0:23,0:22:60.20:0,60,841	0/0:26,0:26:72.22:0,72,993	0/0:25,0:25:72.24:0,72,1025	0/0:26,0:25:75.22:0,75,1037	0/0:37,0:37:99:0,105,1480	0/0:20,0:20:60.19:0,60,844	0/0:24,0:24:72.22:0,72,1012	0/0:23,0:23:63.21:0,63,888	0/0:11,0:11:24.08:0,24,344	0/0:40,0:40:99:0,111,1587	0/0:36,0:36:99:0,105,1413	0/0:31,0:31:90.30:0,90,1288	0/0:37,0:37:99:0,102,1421	0/0:34,0:33:99:0,99,1382	0/0:38,0:38:99:0,114,1573	0/0:34,0:34:90.23:0,90,1223	0/0:16,0:16:48.16:0,48,687	0/0:21,0:21:60.20:0,60,859	0/0:39,0:39:99:0,111,1570	0/0:20,0:20:54.18:0,54,772	0/0:16,0:16:45.14:0,45,626	0/0:47,0:47:99:0,138,1915	0/0:28,0:28:81.26:0,81,1139	0/0:26,0:26:75.17:0,75,1002	0/0:39,0:39:99:0,117,1656	0/0:16,0:16:48.16:0,48,687
chr10	29617517	.	T	TA	714.46	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-5.537;DP=507;FS=21.470;HRun=1;HaplotypeScore=49.9854;InbreedingCoeff=0.9442;MQ=91.60;MQ0=0;MQRankSum=-3.001;QD=34.02;ReadPosRankSum=2.956;VQSLOD=1.8799;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:54.18:0,54,701	0/0:11,0:11:27.09:0,27,351	0/0:24,0:24:63.12:0,63,756	0/0:17,0:18:9.63:0,10,534	0/0:19,0:19:57.17:0,57,726	0/0:17,0:17:51.14:0,51,633	0/0:21,0:21:60.19:0,60,778	0/0:18,0:18:54.18:0,54,700	1/1:0,21:21:54.18:809,54,0	0/0:23,0:23:63.07:0,63,808	0/0:15,0:15:45.14:0,45,571	0/0:25,0:25:72.23:0,72,935	0/0:23,0:23:69.18:0,69,864	0/0:19,0:19:54.16:0,54,684	0/0:24,0:24:72.23:0,72,935	0/0:21,1:22:21.24:0,21,773	0/0:28,0:28:84.25:0,84,1074	0/0:13,0:13:39.08:0,39,487	0/0:11,0:11:33.11:0,33,428	0/0:18,0:18:54.15:0,54,672	0/0:16,0:16:48.13:0,48,607	0/0:15,0:15:42.14:0,42,545	0/0:10,0:10:30.10:0,30,389	0/0:12,0:12:36.08:0,36,436	0/0:16,0:16:45.14:0,45,571	0/0:14,0:14:42.14:0,42,545	0/0:27,0:27:81.26:0,81,1052	0/0:8,0:8:24.08:0,24,311
chr10	29617999	.	T	TA	340.15	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-2.686;DP=584;FS=1.001;HRun=7;HaplotypeScore=56.3869;InbreedingCoeff=0.9575;MQ=69.27;MQ0=0;MQRankSum=-1.378;QD=20.01;ReadPosRankSum=0.484;VQSLOD=3.0752;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,15:16:36.11:435,36,0	0/0:8,0:8:24.04:0,24,231	0/0:12,0:9:12.46:0,12,182	0/0:19,0:15:20.44:0,20,164	0/0:32,0:32:93.15:0,93,898	0/0:27,0:27:78.13:0,78,753	0/0:15,0:15:36.04:0,36,341	0/0:24,0:24:48.05:0,48,459	0/0:17,0:17:26.63:0,27,375	0/0:23,0:23:63.09:0,63,602	0/0:20,0:20:51.06:0,51,486	0/0:24,0:24:63.08:0,63,603	0/0:26,0:26:78.13:0,78,752	0/0:24,0:24:69.09:0,69,661	0/0:31,0:31:90.14:0,90,869	0/0:21,0:21:60.09:0,60,579	0/0:20,0:20:54.06:0,54,514	0/0:24,0:24:60.07:0,60,573	0/0:20,0:20:48.07:0,48,463	0/0:34,0:34:87.05:0,87,828	0/0:14,0:14:42.07:0,42,405	0/0:22,0:22:60.08:0,60,574	0/0:17,0:17:51.05:0,51,481	0/0:12,0:12:33:0,33,309	0/0:17,0:17:48.08:0,48,464	0/0:29,0:29:75.11:0,75,724	0/0:28,0:27:72.11:0,72,695	0/0:6,0:6:18.03:0,18,174
chr10	29622691	.	C	CCAG	35887.89	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-9.731;DP=714;FS=1.996;HRun=0;HaplotypeScore=92.5879;InbreedingCoeff=0.9979;MQ=69.34;MQ0=0;MQRankSum=-6.775;QD=54.29;ReadPosRankSum=4.479;VQSLOD=7.0089;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:42.07:0,42,620	1/1:1,6:7:21.07:413,21,0	0/0:21,0:21:45.25:0,45,721	0/0:16,0:16:36.12:0,36,572	1/1:2,24:28:54.19:1190,54,0	1/1:1,20:21:54.19:1191,54,0	1/1:3,33:36:84.29:1822,84,0	1/1:1,22:24:69.21:1367,69,0	1/1:1,20:21:57.20:1258,57,0	1/1:3,27:31:84.25:1777,84,0	1/1:2,23:25:60.21:1323,60,0	1/1:4,28:32:84.29:1838,84,0	1/1:3,37:40:99:2352,108,0	1/1:2,33:35:96.33:2087,96,0	1/1:6,29:35:81.28:1788,81,0	1/1:0,22:22:66.23:1457,66,0	1/1:0,31:31:84.29:1852,84,0	1/1:2,14:17:33.11:728,33,0	1/1:6,10:16:33.11:692,33,0	1/1:1,43:45:99:2515,117,0	1/1:3,25:28:57.20:1258,57,0	1/1:1,27:31:66.23:1448,66,0	1/1:4,24:28:72.25:1537,72,0	1/1:2,22:26:66.23:1443,66,0	1/1:1,15:16:42.14:927,42,0	1/1:4,19:23:57.20:1244,57,0	1/1:2,28:32:81.28:1785,81,0	1/1:0,9:9:27.09:596,27,0
chr10	29622900	.	TG	T	14190.81	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=5.828;DP=623;FS=14.736;HRun=7;HaplotypeScore=142.1734;InbreedingCoeff=0.9820;MQ=72.75;MQ0=1;MQRankSum=-3.302;QD=25.16;ReadPosRankSum=2.935;VQSLOD=3.3212;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,35:37:96.21:976,96,0	1/1:1,4:5:12.02:121,12,0	0/0:13,0:12:15.14:0,15,281	0/0:15,0:15:15.08:0,15,258	1/1:30,0:30:78.15:782,78,0	1/1:2,27:29:72.10:716,72,0	1/1:5,18:23:48.09:484,48,0	1/1:5,28:33:68.92:805,69,0	1/1:1,28:29:72.16:733,72,0	1/1:1,20:21:63.12:630,63,0	1/1:1,12:13:27.05:272,27,0	1/1:3,25:28:60.11:601,60,0	1/1:3,36:39:99:1059,105,0	1/1:1,22:23:60.12:604,60,0	1/1:4,16:20:48.09:483,48,0	1/1:3,26:29:72.14:725,72,0	0/0:12,0:11:30.09:0,30,367	0/0:19,0:19:45.14:0,45,561	1/1:3,10:13:30.01:291,30,0	1/1:2,12:14:39.08:393,39,0	1/1:1,23:23:60.12:605,60,0	1/1:1,19:20:57.11:571,57,0	1/1:1,20:21:54.10:545,54,0	1/1:3,15:18:45.09:454,45,0	1/1:3,21:24:60.11:602,60,0	1/1:1,23:24:66.09:650,66,0	1/1:7,28:35:75.14:754,75,0	1/1:0,12:12:33.07:333,33,0
chr10	29622907	.	GA	G	12822.80	PASS	AB=1.000;AC=47;AF=0.839;AN=56;BaseQRankSum=8.315;DP=634;FS=8.953;HRun=1;HaplotypeScore=156.5113;InbreedingCoeff=0.8480;MQ=72.98;MQ0=1;MQRankSum=-5.319;QD=22.22;ReadPosRankSum=6.398;VQSLOD=4.1371;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:41,0:41:28.20:161,0,28	1/1:4,0:4:12.02:121,12,0	0/0:14,0:14:36.02:0,36,478	0/0:14,0:14:32.03:0,32,405	1/1:3,28:31:81.15:804,81,0	1/1:29,0:29:72.10:716,72,0	1/1:21,0:21:48.09:484,48,0	1/1:38,0:38:86.97:835,87,0	1/1:30,0:30:9.41:126,9,0	1/1:23,0:23:63.12:630,63,0	1/1:13,0:14:27.05:273,27,0	1/1:27,0:27:60.11:602,60,0	1/1:37,0:37:99:1059,105,0	1/1:24,0:24:60.12:604,60,0	1/1:19,0:19:48.09:483,48,0	1/1:29,0:29:72.14:725,72,0	0/0:13,0:12:39.07:0,39,510	0/0:16,0:16:48.14:0,48,696	1/1:14,0:14:30.02:291,30,0	1/1:15,0:15:39.08:393,39,0	1/1:26,0:25:60.12:605,60,0	1/1:24,0:24:57.11:571,57,0	1/1:21,0:21:54.11:545,54,0	1/1:17,0:17:45.09:454,45,0	1/1:25,0:25:60.12:602,60,0	1/1:24,0:24:66.09:650,66,0	1/1:32,0:32:75.14:754,75,0	1/1:12,0:12:33.07:333,33,0
chr10	29623099	.	G	GC	9965.37	PASS	AB=1.000;AC=46;AF=0.821;AN=56;BaseQRankSum=2.610;DP=785;FS=0.438;HRun=4;HaplotypeScore=117.7212;InbreedingCoeff=0.5653;MQ=79.19;MQ0=0;MQRankSum=-10.393;QD=13.92;ReadPosRankSum=10.505;VQSLOD=1.9589;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,29:35:78.26:1064,78,0	1/1:14,0:14:17.06:190,17,0	0/0:27,0:27:74.93:0,75,776	0/0:19,0:18:44.43:0,44,503	1/1:36,0:36:79.13:488,79,0	1/1:29,0:29:66.55:370,67,0	1/1:20,0:20:26.20:226,26,0	0/1:39,0:39:34.21:235,0,34	0/0:23,0:23:20.76:0,21,84	1/1:27,0:27:65.17:304,65,0	1/1:31,0:31:59.49:384,59,0	1/1:38,0:38:18.93:367,19,0	0/1:33,0:33:0.77:292,0,1	1/1:33,0:33:83.28:460,83,0	1/1:36,0:36:69.03:460,69,0	1/1:26,0:26:38.18:279,38,0	1/1:6,35:41:99:1354,99,0	1/1:0,11:11:30.10:407,30,0	0/1:20,0:20:8.14:144,0,8	1/1:34,0:34:64.13:421,64,0	1/1:24,0:24:68.92:360,69,0	0/1:29,0:29:10.13:281,0,10	1/1:36,0:36:50.74:463,51,0	1/1:20,0:20:48.85:256,49,0	1/1:28,0:28:23.60:291,24,0	1/1:16,0:16:16.36:170,16,0	1/1:40,0:40:39.61:444,40,0	1/1:20,0:20:46.27:255,46,0
chr10	29623103	.	C	CT	23507.98	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-6.692;DP=787;FS=1.233;HRun=4;HaplotypeScore=74.0390;InbreedingCoeff=0.9996;MQ=80.43;MQ0=0;MQRankSum=-10.423;QD=31.81;ReadPosRankSum=7.097;VQSLOD=4.5522;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:30:53.19:405,53,0	1/1:1,13:14:39.13:527,39,0	0/0:28,0:28:72.06:0,72,756	0/0:20,0:19:51.08:0,51,538	1/1:1,35:36:99:1409,105,0	1/1:0,27:27:69.23:942,69,0	1/1:1,17:18:51.17:697,51,0	1/1:5,33:38:99:1243,102,0	1/1:24,0:24:56.81:442,57,0	1/1:0,27:27:81.23:1060,81,0	1/1:1,31:32:87.20:1147,87,0	1/1:4,33:38:87.29:1189,87,0	1/1:4,29:33:72.24:980,72,0	1/1:2,33:35:87.29:1188,87,0	1/1:1,35:36:99:1330,99,0	1/1:1,27:28:63.20:861,63,0	1/1:38,0:38:74.86:504,75,0	1/1:11,0:11:29:165,29,0	1/1:2,17:19:51.12:648,51,0	1/1:2,33:35:96.15:1245,96,0	1/1:0,26:26:72.24:984,72,0	1/1:2,27:29:72.24:984,72,0	1/1:2,35:37:99:1329,99,0	1/1:0,20:20:51.17:697,51,0	1/1:3,26:29:72.24:984,72,0	1/1:3,18:21:54.14:691,54,0	1/1:2,35:38:90.16:1200,90,0	1/1:0,20:20:48.16:656,48,0
chr10	29623104	.	T	TC	7554.52	PASS	AB=1.000;AC=43;AF=0.768;AN=56;BaseQRankSum=-2.011;DP=780;FS=12.615;HRun=4;HaplotypeScore=127.7387;InbreedingCoeff=0.7414;MQ=80.61;MQ0=0;MQRankSum=-7.835;QD=11.57;ReadPosRankSum=7.884;VQSLOD=1.7673;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:63.35:0,63,282	1/1:14,0:14:13.96:154,14,0	0/0:27,0:27:77.98:0,78,965	0/0:21,0:20:50:0,50,695	1/1:37,0:37:79.89:477,80,0	1/1:27,0:27:65.83:348,66,0	1/1:18,0:18:24.21:210,24,0	1/1:37,0:38:15.12:282,15,0	1/1:2,21:23:54.02:863,54,0	1/1:28,0:28:67.17:320,67,0	1/1:31,0:31:59.11:348,59,0	0/1:38,0:38:8.22:304,0,8	0/1:33,0:33:1.06:269,0,1	1/1:34,0:34:60.34:388,60,0	1/1:36,0:36:65.35:409,65,0	1/1:28,0:28:36.15:258,36,0	0/0:38,0:38:81.06:0,81,363	0/0:11,0:11:19.49:0,19,77	0/1:20,0:20:8.36:160,0,8	1/1:35,0:35:23.33:358,23,0	1/1:26,0:26:68.34:341,68,0	1/1:28,0:28:9.17:263,9,0	1/1:36,0:36:68.10:430,68,0	1/1:20,0:20:48.40:241,48,0	1/1:27,0:27:43.57:290,44,0	1/1:19,0:19:19.83:194,20,0	1/1:37,0:37:61.09:411,61,0	1/1:20,0:20:45.78:236,46,0
chr10	29626310	.	CT	C	4704.70	PASS	AB=0.616;AC=40;AF=0.714;AN=56;BaseQRankSum=4.069;DP=613;FS=5.669;HRun=15;HaplotypeScore=70.1536;InbreedingCoeff=-0.1622;MQ=70.77;MQ0=5;MQRankSum=0.742;QD=8.78;ReadPosRankSum=1.236;VQSLOD=4.2127;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,26:30:69.97:447,70,0	0/1:5,11:16:21.07:127,0,21	0/0:55,0:23:3.26:0,3,97	0/0:21,0:7:0.20:0,0,0	0/1:12,22:38:77.98:274,0,78	0/1:13,7:20:51.97:72,0,52	1/1:2,13:15:9.15:185,9,0	1/1:15,11:26:8.84:181,9,0	0/1:2,4:8:34.64:47,0,35	1/1:6,19:25:49.14:316,49,0	1/1:7,12:22:12.63:181,13,0	0/1:9,9:18:49.98:88,0,50	1/1:4,17:21:12.10:204,12,0	0/1:7,9:16:20.17:139,0,20	0/1:6,15:21:43.67:137,0,44	0/1:5,13:19:0.66:114,0,1	0/1:9,11:21:58.16:124,0,58	1/1:0,8:8:14.78:96,15,0	0/1:8,7:18:6.96:130,0,7	1/1:11,21:33:10.33:301,10,0	1/1:5,5:10:11.80:77,12,0	1/1:2,14:19:38.87:231,39,0	1/1:5,9:14:17.62:115,18,0	0/1:2,11:14:21.04:128,0,21	0/1:8,17:26:29.90:190,0,30	1/1:7,20:31:17.47:332,17,0	1/1:6,16:22:35.32:231,35,0	1/1:6,16:23:37.45:236,37,0
chr10	29629012	.	CT	C	1404.54	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.680;DP=618;FS=1.338;HRun=1;HaplotypeScore=60.4843;InbreedingCoeff=0.9622;MQ=80.84;MQ0=0;MQRankSum=-2.093;QD=35.11;ReadPosRankSum=2.174;VQSLOD=3.6876;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,40:40:99:1499,108,0	0/0:4,0:4:12.04:0,12,192	0/0:20,0:20:54.57:0,55,768	0/0:11,0:11:32.76:0,33,465	0/0:29,0:29:87.28:0,87,1360	0/0:20,0:20:59.99:0,60,903	0/0:11,0:11:33.11:0,33,522	0/0:28,0:28:84.28:0,84,1320	0/0:22,0:22:66.21:0,66,1017	0/0:27,0:27:81.27:0,81,1276	0/0:27,0:27:81.25:0,81,1246	0/0:25,0:25:75.26:0,75,1197	0/0:36,0:36:99:0,108,1652	0/0:21,0:21:63.21:0,63,1004	0/0:21,0:21:63.19:0,63,960	0/0:31,0:31:93.32:0,93,1486	0/0:29,0:29:84.22:0,84,1276	0/0:17,0:17:51.17:0,51,798	0/0:24,0:24:72.25:0,72,1151	0/0:25,0:25:75.26:0,75,1195	0/0:18,0:18:54.17:0,54,830	0/0:19,0:19:57.18:0,57,888	0/0:21,0:21:63.20:0,63,982	0/0:12,0:12:36.12:0,36,575	0/0:28,0:28:84.25:0,84,1296	0/0:20,0:20:60.19:0,60,935	0/0:26,0:26:78.25:0,78,1222	0/0:6,0:6:18.06:0,18,288
chr10	29629717	.	TTTTTG	T	990.90	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.466;DP=785;FS=0.857;HRun=0;HaplotypeScore=149.8653;InbreedingCoeff=0.9376;MQ=73.39;MQ0=2;MQRankSum=-0.864;QD=34.17;ReadPosRankSum=3.075;VQSLOD=3.7068;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,22:29:57.20:1086,57,0	0/0:6,0:6:9.03:0,9,228	0/0:30,0:28:45.11:0,45,947	0/0:46,0:38:39.30:0,39,1261	0/0:36,0:36:96.33:0,96,2679	0/0:40,0:40:87.30:0,87,2428	0/0:12,0:12:30.10:0,30,870	0/0:39,0:39:72.24:0,72,1826	0/0:25,0:25:54.19:0,54,1488	0/0:26,0:26:54.19:0,54,1520	0/0:31,0:31:72.25:0,72,1953	0/0:29,0:29:72.25:0,72,2028	0/0:32,0:32:75.26:0,75,2103	0/0:26,0:26:63.18:0,63,1727	0/0:41,0:40:99:0,105,2990	0/0:42,0:42:99:0,111,3123	0/0:30,0:30:84.25:0,84,2328	0/0:23,0:23:60.21:0,60,1677	0/0:23,0:23:51.18:0,51,1431	0/0:24,0:24:60.21:0,60,1662	0/0:34,0:33:84.29:0,84,2341	0/0:21,0:21:51.18:0,51,1468	0/0:27,0:27:66.23:0,66,1866	0/0:20,0:20:51.18:0,51,1478	0/0:30,0:30:78.25:0,78,2160	0/0:20,0:20:48.16:0,48,1341	0/0:37,0:35:96.33:0,96,2707	0/0:6,0:6:18.06:0,18,474
chr10	29630007	.	A	AGACAGCTCAGGGATACAG	94770.21	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-1.099;DP=683;FS=2.412;HRun=0;HaplotypeScore=275.1073;InbreedingCoeff=0.9935;MQ=73.32;MQ0=0;MQRankSum=-14.526;QD=163.96;ReadPosRankSum=3.964;VQSLOD=4.5090;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:22,7:37:72.20:5057,72,0	1/1:4,3:10:15.05:1316,15,0	0/0:22,0:22:63.19:0,63,2486	0/0:21,0:21:50.90:0,51,1804	1/1:13,16:38:66.18:5466,66,0	1/1:22,3:27:51.17:3818,51,0	1/1:13,8:23:42.14:3240,42,0	1/1:39,0:39:99:6851,105,0	0/0:17,0:17:48.15:0,48,2272	1/1:15,6:24:72.21:5079,72,0	1/1:15,7:27:45.11:3611,45,0	1/1:14,8:29:63.22:4959,63,0	1/1:17,11:33:81.28:6514,81,0	1/1:16,10:32:72.25:5772,72,0	1/1:10,10:21:54.19:3790,54,0	1/1:11,4:18:41.82:3315,42,0	0/0:33,0:33:96.30:0,96,4397	0/0:12,0:12:33.11:0,33,1410	1/1:13,6:21:60.18:3845,60,0	1/1:11,6:19:36.12:2777,36,0	1/1:14,2:18:18.06:1472,18,0	1/1:10,7:17:33.11:2887,33,0	1/1:9,8:21:48.16:3967,48,0	1/1:13,2:18:23.70:1537,24,0	1/1:12,5:20:45.15:3112,45,0	1/1:16,12:36:99:6927,105,0	1/1:20,12:36:96.33:7146,96,0	1/1:8,1:13:27.09:2313,27,0
chr10	29630136	.	AAAT	A	1285.71	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=7.668;DP=626;FS=11.894;HRun=0;HaplotypeScore=93.3117;InbreedingCoeff=0.6440;MQ=70.89;MQ0=2;MQRankSum=0.750;QD=23.38;ReadPosRankSum=1.539;VQSLOD=3.1098;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,28:29:81.28:1379,81,0	0/0:13,0:13:39.12:0,39,808	0/1:26,0:24:7.74:8,0,881	0/0:25,0:19:7.50:0,7,525	0/0:43,0:43:99:0,123,2719	0/0:23,0:23:69.24:0,69,1589	0/0:17,0:17:42.13:0,42,817	0/0:34,0:34:99:0,99,2170	0/0:20,0:20:60.21:0,60,1376	0/0:26,0:26:75.26:0,75,1729	0/0:23,0:23:63.22:0,63,1413	0/0:22,0:22:63.20:0,63,1395	0/0:21,0:21:57.20:0,57,1310	0/0:18,0:18:54.17:0,54,1184	0/0:15,0:15:45.09:0,45,974	0/0:17,0:17:45.15:0,45,1033	0/0:32,0:31:90.31:0,90,2041	0/0:25,0:25:75.17:0,75,1549	0/0:17,0:17:51.17:0,51,1098	0/0:31,0:31:87.30:0,87,1944	0/0:9,0:9:21.07:0,21,481	0/0:14,0:14:42.14:0,42,949	0/0:18,0:18:54.19:0,54,1220	0/0:18,0:18:48.16:0,48,1076	0/0:13,0:13:36.12:0,36,818	0/0:31,0:31:93.32:0,93,2130	0/0:35,0:35:99:0,99,2160	0/0:11,0:11:33.11:0,33,760
chr10	29630913	.	CT	C	1134.67	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.020;DP=573;FS=15.337;HRun=3;HaplotypeScore=58.5941;InbreedingCoeff=0.9971;MQ=96.84;MQ0=0;MQRankSum=-2.813;QD=29.09;ReadPosRankSum=2.816;VQSLOD=1.9670;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:78.26:0,78,1120	0/0:10,0:10:30.09:0,30,414	0/0:28,0:28:81.25:0,81,1133	0/0:35,0:35:99:0,105,1447	0/0:18,0:18:48.14:0,48,669	0/0:16,0:16:42.08:0,42,563	0/0:22,0:22:63.21:0,63,907	0/0:27,0:27:57.18:0,57,804	0/0:17,0:17:51.17:0,51,734	0/0:18,0:18:45.15:0,45,647	0/0:14,0:14:42.13:0,42,585	0/0:29,0:29:84.27:0,84,1190	0/0:21,0:21:60.20:0,60,863	0/0:30,0:30:90.25:0,90,1222	0/0:32,0:32:90.27:0,90,1242	0/0:24,0:24:69.20:0,69,969	1/1:0,20:20:57.18:707,57,0	1/1:2,17:19:39.54:550,40,0	0/0:17,0:17:33.11:0,33,474	0/0:16,0:16:39.13:0,39,560	0/0:16,0:16:45.12:0,45,610	0/0:17,0:17:48.12:0,48,634	0/0:9,0:9:21.07:0,21,302	0/0:22,0:22:66.22:0,66,949	0/0:16,0:16:42.11:0,42,582	0/0:16,0:16:45.15:0,45,640	0/0:27,0:27:78.21:0,78,1050	0/0:10,0:10:30.08:0,30,413
chr10	29631584	.	ATATTATAT	A	6812.84	PASS	AB=0.800;AC=36;AF=0.750;AN=48;BaseQRankSum=6.358;DP=201;FS=15.491;HRun=0;HaplotypeScore=64.1014;InbreedingCoeff=0.4902;MQ=87.56;MQ0=1;MQRankSum=-5.164;QD=55.84;ReadPosRankSum=-1.492;VQSLOD=2.4794;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:8:24.08:0,24,955	1/1:0,3:3:6.02:170,6,0	0/1:9,0:7:39.10:39,0,229	0/0:35,0:15:1.19:0,1,421	1/1:0,6:6:17.93:219,18,0	1/1:1,2:3:6.02:169,6,0	1/1:0,1:1:3.01:85,3,0	1/1:2,44:46:99:2866,132,0	0/0:4,0:4:12.04:0,12,532	0/1:1,2:3:23.82:141,0,24	./.	./.	1/1:0,7:7:12.04:339,12,0	1/1:0,4:4:9.03:250,9,0	1/1:1,4:5:9.03:254,9,0	1/1:0,2:2:3.01:85,3,0	0/0:18,0:18:54.18:0,54,2010	0/0:14,0:14:36.12:0,36,1490	1/1:1,4:5:12.04:293,12,0	1/1:0,2:2:6.02:123,6,0	1/1:1,0:1:3.01:85,3,0	./.	1/1:0,3:3:6.02:169,6,0	./.	1/1:0,2:2:3.01:85,3,0	1/1:2,5:7:15.05:424,15,0	1/1:0,4:4:12.04:339,12,0	1/1:0,9:9:24.08:679,24,0
chr10	29632166	.	ATTT	A	13723.78	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-6.245;DP=576;FS=6.024;HRun=12;HaplotypeScore=114.2816;InbreedingCoeff=0.9894;MQ=64.44;MQ0=4;MQRankSum=-0.697;QD=28.30;ReadPosRankSum=2.735;VQSLOD=3.9778;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:2,0:17:18.57:0,19,43	1/1:1,14:15:36.11:455,36,0	0/0:11,0:11:17.55:0,18,277	0/0:6,0:5:12.04:0,12,183	1/1:2,21:23:60.11:739,60,0	1/1:3,16:19:45.09:551,45,0	1/1:1,20:22:50.85:580,51,0	1/1:3,12:15:22.53:369,23,0	0/0:3,0:15:39.63:0,40,306	1/1:4,20:23:63.17:780,63,0	1/1:1,21:22:44.88:526,45,0	1/1:2,15:17:39.11:493,39,0	1/1:4,24:28:60.09:740,60,0	1/1:3,14:17:36.08:455,36,0	1/1:4,22:26:65.99:760,66,0	1/1:2,16:18:25.72:442,26,0	0/0:7,0:27:56.29:0,56,437	0/0:4,0:14:37.14:0,37,324	1/1:9,14:23:40.63:528,41,0	1/1:4,35:39:93.12:1155,93,0	1/1:2,16:18:42.12:531,42,0	1/1:1,22:23:53.86:619,54,0	1/1:3,23:26:57.14:720,57,0	1/1:4,16:20:42.10:531,42,0	1/1:2,17:19:48.14:606,48,0	1/1:3,24:26:66.16:819,66,0	1/1:5,20:25:54.12:682,54,0	1/1:0,17:18:51.16:644,51,0
chr10	29634109	.	GT	G	1564.07	PASS	AB=0.926;AC=17;AF=0.304;AN=56;BaseQRankSum=1.504;DP=599;FS=0.834;HRun=14;HaplotypeScore=111.5696;InbreedingCoeff=0.5765;MQ=72.48;MQ0=1;MQRankSum=0.549;QD=6.18;ReadPosRankSum=2.294;VQSLOD=2.7600;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,20:29:6.73:335,7,0	1/1:2,7:11:19.77:123,20,0	0/0:18,0:13:11.96:0,12,98	0/1:15,0:11:6.39:6,0,26	0/0:21,1:28:24.13:0,24,303	0/0:23,1:26:38.35:0,38,469	0/0:12,1:13:5.93:0,6,188	1/1:11,19:32:7.75:311,8,0	0/0:3,0:12:11.32:0,11,50	1/1:7,13:21:43.62:292,44,0	1/1:8,17:26:24.74:307,25,0	0/0:19,0:21:41.85:0,42,368	0/1:19,2:24:7.15:7,0,328	0/0:17,2:19:15.45:0,15,282	0/1:18,3:21:3.63:4,0,225	0/0:18,2:27:18:0,18,367	0/1:15,2:18:2.29:2,0,236	0/0:15,0:18:35.69:0,36,299	0/0:16,0:22:45.06:0,45,337	0/0:24,1:29:21.22:0,21,312	0/0:17,0:17:36.02:0,36,328	0/0:24,2:26:21.91:0,22,316	0/0:16,0:17:29.86:0,30,262	0/0:15,0:15:6.51:0,7,192	1/1:6,19:28:31.78:339,32,0	0/1:21,2:28:19.21:19,0,311	0/0:24,0:28:65.40:0,65,552	0/0:8,0:10:23.86:0,24,209
chr10	29635266	.	G	GAGACTCCTGCCCAA	101253.51	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-4.115;DP=778;FS=1.908;HRun=0;HaplotypeScore=254.7022;InbreedingCoeff=0.9976;MQ=69.54;MQ0=0;MQRankSum=-13.168;QD=148.25;ReadPosRankSum=2.593;VQSLOD=5.0334;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:16,24:48:99:6669,105,0	1/1:5,9:15:36.12:2261,36,0	0/0:21,0:21:50.33:0,50,1867	0/0:22,0:22:60.20:0,60,2107	1/1:23,12:38:90.10:4877,90,0	1/1:16,7:26:69.16:3982,69,0	1/1:16,6:22:63.17:3763,63,0	1/1:38,3:50:99:6438,135,0	1/1:12,19:33:93.32:5859,93,0	1/1:10,7:18:51.04:3000,51,0	1/1:13,9:28:54:2752,54,0	1/1:16,14:36:90.78:5402,91,0	1/1:12,12:28:69.24:4379,69,0	1/1:13,19:36:87.77:5579,88,0	1/1:14,16:36:90.27:5649,90,0	1/1:12,19:32:93.32:6184,93,0	0/0:37,0:37:99:0,102,3933	0/0:15,0:15:42.14:0,42,1588	1/1:22,3:29:65.38:3041,65,0	1/1:15,9:29:69.06:3718,69,0	1/1:13,2:21:32.98:1654,33,0	1/1:12,12:25:69.15:4287,69,0	1/1:13,14:30:82.48:4954,82,0	1/1:11,3:15:34.58:1615,35,0	1/1:8,7:16:42.10:2502,42,0	1/1:15,12:29:81.25:4944,81,0	1/1:16,17:33:99:6646,99,0	1/1:3,5:9:18.06:1097,18,0
chr10	29635502	.	GAAGTGTAAGCCA	G	2247.70	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.402;DP=772;FS=7.290;HRun=0;HaplotypeScore=297.4646;InbreedingCoeff=0.9993;MQ=79.39;MQ0=0;MQRankSum=-7.241;QD=62.44;ReadPosRankSum=1.981;VQSLOD=2.1250;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,150,8978	0/0:17,0:17:51.18:0,51,3007	0/0:30,0:30:84.29:0,84,4147	0/0:27,0:27:71.02:0,71,3363	0/0:36,0:36:99:0,108,5785	0/0:28,0:28:84.29:0,84,4968	0/0:23,0:23:63.20:0,63,3590	0/0:39,0:39:99:0,108,5886	0/0:14,0:14:42.14:0,42,2469	0/0:28,0:28:81.28:0,81,4746	0/0:20,0:20:60.19:0,60,3343	0/0:40,0:40:99:0,117,6490	0/0:29,0:29:87.30:0,87,5184	0/0:28,0:28:78.27:0,78,4718	0/0:32,0:32:84.29:0,84,5024	0/0:42,0:42:99:0,120,7231	1/1:4,17:21:36.12:1368,36,0	1/1:4,11:15:27.09:1001,27,0	0/0:18,0:18:51.18:0,51,2871	0/0:37,0:37:99:0,111,6281	0/0:36,0:36:99:0,105,5741	0/0:18,0:18:54.17:0,54,3018	0/0:22,0:22:66.21:0,66,3807	0/0:35,0:35:99:0,105,6284	0/0:21,0:21:63.19:0,63,3396	0/0:29,0:29:87.30:0,87,5224	0/0:24,0:24:72.25:0,72,4184	0/0:12,0:12:36.12:0,36,2015
chr10	29635961	.	A	AGTGTGT	3472.27	PASS	AB=0.968;AC=38;AF=0.704;AN=54;BaseQRankSum=1.244;DP=617;FS=33.753;HRun=0;HaplotypeScore=160.7725;InbreedingCoeff=-0.3736;MQ=58.03;MQ0=21;MQRankSum=0.246;QD=5.86;ReadPosRankSum=-3.497;VQSLOD=0.1358;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:28:30.15:30,0,50	1/1:8,0:8:8.75:57,9,0	0/1:30,0:13:0:0,0,0	./.	0/1:17,0:17:9.09:179,0,9	0/1:32,0:32:25.96:250,0,26	0/1:27,0:26:52.54:155,0,53	1/1:26,0:25:14.75:96,15,0	0/1:18,0:18:35.92:36,0,98	1/1:27,0:27:29.78:275,30,0	0/1:26,0:25:0.11:173,0,0	1/1:18,0:17:8.92:133,9,0	1/1:25,0:25:28.87:238,29,0	1/1:11,0:18:3.84:48,4,0	1/1:22,0:21:9:95,9,0	0/1:16,0:25:58.24:58,0,86	0/1:23,0:23:70.78:71,0,203	0/1:10,0:10:50.79:51,0,55	1/1:25,0:25:9.02:118,9,0	0/1:18,9:25:31.34:48,0,31	0/1:15,0:14:45.40:135,0,45	0/1:27,0:26:19.91:153,0,20	0/1:21,0:19:44:70,0,44	1/1:16,0:15:2.30:49,2,0	1/1:20,0:20:14.31:110,14,0	1/1:28,0:27:17.81:452,18,0	0/1:26,0:26:47.10:381,0,47	0/1:7,0:7:10.49:10,0,17
chr10	29635969	.	T	TGTGT	4388.93	PASS	AB=1.000;AC=43;AF=0.796;AN=54;BaseQRankSum=-0.883;DP=615;FS=11.838;HRun=0;HaplotypeScore=125.0576;InbreedingCoeff=-0.2333;MQ=54.36;MQ0=25;MQRankSum=1.806;QD=7.41;ReadPosRankSum=-1.155;VQSLOD=2.4921;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:28:11.13:34,0,11	1/1:8,0:8:9.50:116,9,0	0/1:28,0:11:0:0,0,0	./.	1/1:18,0:18:14.64:232,15,0	0/1:30,0:30:11.75:397,0,12	0/1:27,0:26:5.05:339,0,5	1/1:23,0:21:5.96:45,6,0	0/1:17,0:17:36.74:54,0,37	1/1:22,4:27:21.03:297,21,0	1/1:27,0:26:16.99:234,17,0	1/1:20,0:19:9.01:152,9,0	1/1:22,0:22:27.32:359,27,0	1/1:21,0:20:3.48:73,3,0	1/1:21,0:20:9.03:162,9,0	0/1:25,0:25:38.61:66,0,39	0/1:24,0:24:67.91:68,0,119	0/1:14,0:13:20.89:21,0,37	1/1:24,0:24:6.01:66,6,0	1/1:26,0:23:2.23:37,2,0	0/1:18,0:17:29.83:160,0,30	1/1:26,0:25:16.32:275,16,0	0/1:19,0:17:28.39:161,0,28	1/1:17,0:16:11.77:119,12,0	1/1:18,0:18:14.73:159,15,0	1/1:29,0:27:18.09:251,18,0	0/1:27,0:27:13.44:476,0,13	1/1:7,0:7:1.63:36,2,0
chr10	29636738	.	TC	T	24529.16	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=15.661;DP=828;FS=1.145;HRun=2;HaplotypeScore=250.9242;InbreedingCoeff=0.9994;MQ=64.74;MQ0=0;MQRankSum=-8.356;QD=35.14;ReadPosRankSum=0.520;VQSLOD=4.0752;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,37:38:87.23:1108,87,0	1/1:0,10:10:30.10:389,30,0	0/0:24,0:23:69.23:0,69,1023	0/0:23,0:23:66.22:0,66,989	1/1:1,30:31:84.20:1069,84,0	1/1:0,27:27:72.16:896,72,0	1/1:1,32:33:87.28:1129,87,0	1/1:0,29:29:87.24:1096,87,0	0/0:29,0:29:87.29:0,87,1304	1/1:0,35:35:99:1296,102,0	1/1:0,23:23:66.17:838,66,0	1/1:2,43:45:99:1516,117,0	1/1:0,33:33:93.30:1206,93,0	1/1:0,26:26:78.21:992,78,0	1/1:1,46:47:99:1693,132,0	1/1:0,41:41:99:1517,117,0	0/0:32,0:32:96.33:0,96,1438	0/0:22,0:22:63.14:0,63,895	1/1:0,15:15:45.13:569,45,0	1/1:0,18:18:54.11:680,54,0	1/1:3,43:46:99:1516,117,0	1/1:1,27:28:72.19:915,72,0	1/1:1,26:27:81.12:993,81,0	1/1:0,37:37:93.21:1187,93,0	1/1:0,30:30:87.24:1110,87,0	1/1:0,37:37:99:1336,105,0	1/1:0,31:31:90.29:1167,90,0	1/1:0,11:11:24.08:311,24,0
chr10	29636867	.	CCCAAATGGATGCTCCAAA	C	46795.82	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=14.461;DP=566;FS=9.371;HRun=0;HaplotypeScore=340.7905;InbreedingCoeff=0.9922;MQ=78.34;MQ0=0;MQRankSum=-14.460;QD=103.76;ReadPosRankSum=6.896;VQSLOD=3.5523;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,8:17:21.07:1006,21,0	1/1:2,12:14:33.11:1603,33,0	0/0:21,0:21:51.18:0,51,3037	0/0:23,0:23:63.22:0,63,3827	1/1:3,20:23:48.16:2310,48,0	1/1:3,15:18:48.16:2417,48,0	1/1:4,10:14:30.10:1548,30,0	1/1:3,9:12:27.08:1067,27,0	0/0:17,0:17:51.18:0,51,3263	1/1:7,16:23:45.15:2149,45,0	1/1:5,11:16:30.10:1543,30,0	1/1:5,22:27:66.23:3307,66,0	1/1:10,13:23:39.13:1952,39,0	1/1:4,12:16:33.11:1702,33,0	1/1:5,18:23:54.19:2726,54,0	1/1:6,29:35:78.27:4024,78,0	0/0:38,0:38:99:0,111,9154	0/0:16,0:16:42.14:0,42,3130	1/1:3,9:12:27.09:1321,27,0	1/1:3,21:24:63.22:3129,63,0	1/1:5,12:17:27.24:1248,27,0	1/1:4,11:15:30.10:1547,30,0	1/1:3,12:15:36.07:1798,36,0	1/1:10,12:22:17.75:928,18,0	1/1:2,17:19:48.16:2416,48,0	1/1:8,22:30:63.20:3030,63,0	1/1:6,25:31:63.22:3250,63,0	1/1:0,5:5:15.05:774,15,0
chr10	29636872	.	AT	A	2150.86	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=15.436;DP=459;FS=7.531;HRun=1;HaplotypeScore=296.0112;InbreedingCoeff=0.9721;MQ=84.77;MQ0=0;MQRankSum=-14.305;QD=6.20;ReadPosRankSum=7.118;VQSLOD=0.2928;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,0:8:13.32:42,13,0	1/1:12,0:12:22.67:71,23,0	0/0:19,0:19:56.67:0,57,847	0/0:26,0:26:62.81:0,63,949	1/1:20,0:20:33.11:115,33,0	1/1:15,1:16:36.31:138,36,0	1/1:10,0:10:22.20:70,22,0	1/1:9,0:9:15.83:50,16,0	0/0:15,0:15:45.14:0,45,694	1/1:16,0:16:34.23:115,34,0	1/1:11,0:11:22.82:77,23,0	1/1:23,0:23:46.62:147,47,0	1/1:13,1:14:29.65:117,30,0	1/1:12,0:12:24.42:77,24,0	1/1:18,1:19:40.75:152,41,0	1/1:29,0:29:57.73:182,58,0	0/0:38,0:38:99:0,114,1767	0/0:14,0:14:39.13:0,39,613	1/1:9,0:9:20.70:74,21,0	1/1:21,0:21:44.88:140,45,0	1/1:12,0:12:20.89:80,21,0	1/1:11,0:11:22.20:70,22,0	1/1:12,1:13:27.43:110,27,0	1/1:12,0:12:13.31:42,13,0	1/1:17,1:18:36.93:147,37,0	1/1:22,0:22:43.43:136,43,0	1/1:25,0:25:46.62:147,47,0	1/1:5,0:5:11.10:35,11,0
chr10	29638625	.	AATT	A	5830.73	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=8.098;DP=454;FS=4.346;HRun=0;HaplotypeScore=109.4276;InbreedingCoeff=0.8678;MQ=66.73;MQ0=2;MQRankSum=-0.211;QD=15.63;ReadPosRankSum=2.376;VQSLOD=4.1621;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:32,0:31:63.56:372,64,0	1/1:10,1:11:26.41:184,26,0	0/0:17,0:11:28.67:0,29,404	0/0:9,0:5:12:0,12,162	1/1:19,0:18:47.25:378,47,0	1/1:15,0:14:35.13:204,35,0	1/1:10,0:9:9.95:65,10,0	1/1:31,0:31:11.29:603,11,0	0/0:11,0:11:33.11:0,33,729	1/1:24,0:22:45.09:464,45,0	1/1:13,1:14:38.52:357,39,0	1/1:9,0:9:14.61:85,15,0	1/1:15,0:15:15.73:163,16,0	1/1:10,0:10:26.32:153,26,0	1/1:21,2:23:58.60:372,59,0	1/1:9,0:9:14.60:83,15,0	0/0:24,0:24:72.25:0,72,1614	0/0:20,0:20:57.19:0,57,1189	1/1:19,1:20:0.19:439,0,0	1/1:10,0:10:29.49:227,29,0	1/1:20,0:18:35.03:203,35,0	1/1:2,0:2:2.92:17,3,0	1/1:14,0:14:23.47:155,23,0	1/1:12,0:12:20.92:119,21,0	1/1:27,1:28:52.79:358,53,0	1/1:25,1:26:53.93:534,54,0	1/1:12,0:12:29.25:196,29,0	1/1:7,0:7:17.53:102,18,0
chr10	29638626	.	ATT	A	13419.28	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=3.941;DP=436;FS=5.576;HRun=2;HaplotypeScore=72.3398;InbreedingCoeff=0.9277;MQ=67.89;MQ0=2;MQRankSum=-0.455;QD=37.91;ReadPosRankSum=1.244;VQSLOD=4.8728;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,30:31:69.18:1044,69,0	1/1:1,10:11:27.08:415,27,0	0/0:17,0:11:11.72:0,12,337	0/0:9,0:5:11.99:0,12,134	1/1:0,17:16:48.16:714,48,0	1/1:0,15:14:36.12:586,36,0	1/1:1,9:9:12.04:195,12,0	1/1:0,27:27:81.27:1252,81,0	0/0:11,0:11:33.11:0,33,589	1/1:0,23:22:66.20:989,66,0	1/1:1,12:13:39.11:556,39,0	1/1:0,8:8:15.05:244,15,0	1/1:0,14:14:30.10:488,30,0	1/1:0,10:10:27.09:438,27,0	1/1:2,20:22:60.19:951,60,0	1/1:0,9:9:15.05:243,15,0	0/0:25,0:25:75.26:0,75,1335	0/0:20,0:20:57.12:0,57,944	1/1:2,16:19:34.36:753,34,0	1/1:0,10:10:30.10:463,30,0	1/1:1,18:17:36.12:586,36,0	1/1:0,2:2:3.01:49,3,0	1/1:0,13:13:24.08:379,24,0	1/1:0,12:12:21.07:342,21,0	1/1:1,25:26:54.17:850,54,0	1/1:1,24:25:72.23:1128,72,0	1/1:0,12:12:30.08:459,30,0	1/1:0,6:6:18.06:293,18,0
chr10	29638775	.	T	TATACAC	4988.18	PASS	AB=0.937;AC=40;AF=0.714;AN=56;BaseQRankSum=2.303;DP=461;FS=40.147;HRun=0;HaplotypeScore=200.3402;InbreedingCoeff=-0.0232;MQ=38.82;MQ0=3;MQRankSum=-1.625;QD=12.11;ReadPosRankSum=-3.888;VQSLOD=2.0326;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:13,0:15:0:0,0,0	1/1:6,0:8:12.04:253,12,0	0/0:23,0:7:8.12:0,8,88	0/0:26,0:10:19.96:0,20,178	1/1:19,0:20:8.45:130,8,0	1/1:13,0:20:8.06:126,8,0	0/1:26,0:27:51.32:247,0,51	0/1:22,0:22:81.89:82,0,209	0/1:15,0:15:61.08:61,0,81	0/1:10,0:10:64.86:194,0,65	1/1:19,0:24:16.10:237,16,0	1/1:12,0:13:12.51:221,13,0	0/1:17,0:18:58:134,0,58	1/1:9,0:14:16.12:248,16,0	0/1:18,0:21:2.02:226,0,2	1/1:15,0:18:14.54:270,15,0	1/1:4,15:24:19.61:673,20,0	1/1:4,9:16:15:318,15,0	0/1:11,0:12:99:105,0,120	0/1:13,0:17:7.01:245,0,7	1/1:14,0:14:3.01:69,3,0	1/1:10,0:11:3:69,3,0	1/1:13,0:15:8.88:175,9,0	1/1:7,0:8:3.01:61,3,0	0/1:9,0:9:0:0,0,0	0/1:19,0:19:80.78:413,0,81	0/1:17,0:20:71.79:372,0,72	1/1:1,0:1:3.01:55,3,0
chr10	29639978	.	G	GT	895.29	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=2.090;DP=488;FS=23.574;HRun=11;HaplotypeScore=54.0468;InbreedingCoeff=0.7975;MQ=75.46;MQ0=0;MQRankSum=-2.841;QD=12.43;ReadPosRankSum=0.928;VQSLOD=1.4165;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:27:37.10:0,37,382	0/0:12,0:12:32.87:0,33,255	0/0:12,1:14:13.99:0,14,125	0/0:15,0:13:19.18:0,19,117	0/0:29,0:29:74.69:0,75,578	0/0:15,1:18:15.48:0,15,283	0/0:16,0:16:29.81:0,30,229	0/1:22,0:22:2.81:3,0,157	1/1:1,16:17:39.08:396,39,0	0/0:20,0:20:24.56:0,25,345	0/0:14,0:16:36.93:0,37,267	0/0:14,0:14:32.75:0,33,255	0/0:20,0:20:38.80:0,39,302	0/0:15,1:17:1.42:0,1,182	0/0:22,0:22:45.88:0,46,333	0/0:17,0:18:49.85:0,50,377	1/1:5,13:18:30.06:305,30,0	1/1:1,14:14:33.07:335,33,0	0/0:19,0:19:41.77:0,42,318	0/0:20,0:20:50.79:0,51,395	0/0:10,0:10:20.88:0,21,162	0/0:8,0:8:17.92:0,18,139	0/0:17,1:18:20.37:0,20,341	0/0:14,0:14:32.87:0,33,255	0/0:13,0:13:38.81:0,39,297	0/0:24,0:24:50.01:0,50,392	0/0:17,1:19:10.41:0,10,254	0/0:11,0:11:23.90:0,24,186
chr10	29640063	.	A	AT	9106.65	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-10.993;DP=504;FS=3.884;HRun=10;HaplotypeScore=53.0664;InbreedingCoeff=0.9079;MQ=68.14;MQ0=5;MQRankSum=-0.147;QD=22.88;ReadPosRankSum=0.043;VQSLOD=5.6568;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,18:22:45.11:480,45,0	1/1:0,5:5:9.02:96,9,0	0/0:26,0:9:17.90:0,18,134	0/0:22,0:14:26.74:0,27,212	1/1:3,19:22:51.06:528,51,0	1/1:2,23:25:35.51:583,36,0	1/1:2,12:14:33.08:352,33,0	1/1:8,26:34:60.90:785,61,0	0/0:14,0:14:38.96:0,39,320	1/1:4,15:19:45.08:464,45,0	1/1:2,19:21:54.13:574,54,0	1/1:1,16:17:39.10:416,39,0	1/1:1,16:17:41.94:448,42,0	1/1:4,10:14:8.44:293,8,0	1/1:3,26:29:39.48:616,39,0	1/1:1,12:13:27.05:279,27,0	0/0:29,0:29:68.91:0,69,566	0/0:15,0:15:19.50:0,19,262	1/1:5,15:20:44.68:443,45,0	1/1:4,14:19:41.86:405,42,0	1/1:2,9:11:27.07:288,27,0	1/1:2,1:3:3.01:32,3,0	1/1:1,6:7:12.03:128,12,0	1/1:1,9:10:21.05:224,21,0	1/1:1,5:7:17.88:174,18,0	1/1:5,24:29:71.95:733,72,0	1/1:2,28:30:62.81:670,63,0	1/1:5,4:9:8.97:96,9,0
chr10	29646045	.	TG	T	9683.10	PASS	AB=0.889;AC=45;AF=0.804;AN=56;BaseQRankSum=1.020;DP=624;FS=16.275;HRun=11;HaplotypeScore=110.4573;InbreedingCoeff=0.8671;MQ=69.27;MQ0=1;MQRankSum=-3.923;QD=17.93;ReadPosRankSum=3.697;VQSLOD=4.2464;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,41:50:99:957,117,0	0/0:5,0:5:8.85:0,9,57	0/0:14,0:13:15.66:0,16,165	0/1:14,2:16:18.81:19,0,178	1/1:0,24:24:68.91:565,69,0	1/1:2,17:19:47.90:393,48,0	1/1:5,22:27:39.92:510,40,0	0/0:18,1:18:17.98:0,18,109	1/1:3,0:23:36.66:106,37,0	0/0:30,0:29:40.44:0,40,215	0/0:16,0:15:29.01:0,29,180	1/1:4,30:34:74.88:615,75,0	1/1:5,24:29:62.91:514,63,0	1/1:2,29:31:83.90:689,84,0	1/1:2,32:34:89.89:738,90,0	1/1:1,20:21:56.93:468,57,0	1/1:4,29:33:83.90:689,84,0	1/1:1,12:13:35.96:295,36,0	1/1:7,7:14:20.97:172,21,0	1/1:6,16:23:49.95:396,50,0	1/1:4,19:23:41.94:343,42,0	1/1:3,15:18:38.54:318,39,0	1/1:3,10:13:20.94:171,21,0	1/1:5,20:25:53.89:442,54,0	1/1:1,15:16:38.94:319,39,0	1/1:6,14:20:30.80:327,31,0	1/1:5,16:21:47.93:393,48,0	1/1:1,11:12:29.96:245,30,0
chr10	29647344	.	T	TAAACACAC	15153.40	PASS	AB=0.623;AC=30;AF=0.536;AN=56;BaseQRankSum=3.763;DP=840;FS=1.670;HRun=0;HaplotypeScore=168.0542;InbreedingCoeff=-0.5847;MQ=49.79;MQ0=18;MQRankSum=-8.976;QD=20.64;ReadPosRankSum=9.348;VQSLOD=3.4558;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:20,0:57:99:375,0,143	0/1:1,0:7:14.03:310,0,14	0/0:48,0:20:53.90:0,54,618	0/0:57,0:31:73.56:0,74,1002	1/1:3,0:19:3.03:268,3,0	0/1:5,0:24:59.74:713,0,60	0/1:6,0:26:99:294,0,116	0/1:45,0:45:99:524,0,126	0/1:8,0:35:99:138,0,131	0/1:11,0:40:99:1237,0,131	0/1:1,0:13:9.01:203,0,9	0/1:11,0:34:99:1141,0,112	1/1:4,0:26:6.05:936,6,0	0/1:7,0:23:35.78:804,0,36	0/1:11,0:34:99:772,0,166	1/1:5,0:33:16.32:1964,16,0	0/1:11,0:27:68.38:366,0,68	0/1:8,1:21:50.05:296,0,50	0/1:9,0:17:58.12:570,0,58	1/1:7,0:20:18.06:626,18,0	0/1:17,0:27:70.30:70,0,182	0/1:6,0:15:30.88:228,0,31	0/1:3,0:21:13.14:94,0,13	0/1:19,0:37:99:540,0,104	0/1:13,0:35:85.67:546,0,86	0/1:9,1:38:54.22:1136,0,54	0/1:9,0:32:34.37:670,0,34	0/1:9,0:11:3.88:333,0,4
chr10	29648096	.	G	GCT	4360.68	PASS	AB=0.558;AC=28;AF=0.500;AN=56;BaseQRankSum=0.568;DP=574;FS=11.239;HRun=0;HaplotypeScore=107.9102;InbreedingCoeff=-0.1852;MQ=71.80;MQ0=4;MQRankSum=-1.392;QD=9.93;ReadPosRankSum=4.515;VQSLOD=3.5772;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:39:35.69:0,36,328	1/1:0,0:5:11.83:76,12,0	0/0:12,0:14:31.84:0,32,410	0/0:10,0:10:1.51:0,2,204	0/1:3,0:17:40.88:167,0,41	1/1:1,0:15:13.87:175,14,0	0/1:7,0:26:86.92:246,0,87	0/1:7,0:29:79.54:241,0,80	0/0:1,0:15:42.06:0,42,405	0/1:8,0:29:96.77:288,0,97	0/1:6,0:21:71.95:173,0,72	0/1:2,0:18:8.66:177,0,9	0/1:5,1:22:30.88:248,0,31	0/1:4,0:22:41.04:238,0,41	0/1:5,0:22:25.57:240,0,26	0/1:3,0:16:41.71:185,0,42	0/0:5,0:29:72.19:0,72,328	0/0:5,0:26:35.25:0,35,301	0/1:2,0:13:23.85:102,0,24	0/1:4,0:21:17.66:260,0,18	0/1:4,0:22:41.92:177,0,42	1/1:2,0:15:12.87:204,13,0	0/1:3,0:22:19.14:136,0,19	1/1:1,0:23:44.46:298,44,0	1/1:2,0:15:6.75:153,7,0	0/1:5,0:24:47.86:236,0,48	0/1:7,0:26:98.69:200,0,99	1/1:1,0:13:20.72:139,21,0
chr10	29648248	.	AGAGTGGGTGTGGCCTTGTCG	A	15590.42	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=7.332;DP=598;FS=0.654;HRun=0;HaplotypeScore=239.5257;InbreedingCoeff=0.7206;MQ=57.74;MQ0=2;MQRankSum=-1.552;QD=29.64;ReadPosRankSum=0.542;VQSLOD=3.7713;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:26:57.18:1085,57,0	1/1:0,12:12:15.05:487,15,0	0/0:28,0:20:32.59:0,33,523	0/0:21,0:20:24.40:0,24,389	1/1:3,15:18:15.05:260,15,0	1/1:9,18:27:12.04:641,12,0	1/1:14,0:14:27.09:564,27,0	1/1:12,17:29:51.15:792,51,0	0/0:23,0:23:63.20:0,63,2974	1/1:7,17:24:51.15:1057,51,0	1/1:1,9:10:12.04:305,12,0	1/1:7,24:31:9.03:487,9,0	1/1:5,19:24:23.79:1161,24,0	1/1:3,20:23:27.09:1272,27,0	1/1:3,24:27:21.07:1042,21,0	1/1:4,17:21:18.06:798,18,0	1/1:7,24:31:6.02:301,6,0	1/1:4,13:17:6.02:276,6,0	1/1:10,7:15:21.02:276,21,0	1/1:6,12:18:24.08:468,24,0	1/1:37,0:37:75.16:1180,75,0	1/1:2,12:14:15.05:612,15,0	1/1:5,5:10:6.02:231,6,0	1/1:6,23:28:3.01:162,3,0	1/1:5,21:26:12.04:609,12,0	1/1:4,19:23:54.18:1167,54,0	1/1:4,9:13:6.02:194,6,0	1/1:1,4:5:3.01:162,3,0
chr10	29649348	.	T	TA	9624.48	PASS	AB=0.578;AC=42;AF=0.750;AN=56;BaseQRankSum=-8.460;DP=520;FS=0.903;HRun=9;HaplotypeScore=59.7930;InbreedingCoeff=0.8347;MQ=72.53;MQ0=0;MQRankSum=-0.553;QD=23.53;ReadPosRankSum=-1.302;VQSLOD=5.1739;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:65.96:0,66,573	1/1:4,7:11:15:152,15,0	0/0:11,0:11:17.97:0,18,152	0/0:9,0:9:7.40:0,7,56	1/1:6,27:33:52.11:790,52,0	0/1:4,8:12:2:201,0,2	1/1:1,13:14:36.10:398,36,0	1/1:12,18:30:31.08:547,31,0	0/0:12,0:12:26.96:0,27,231	0/1:4,16:20:0.95:447,0,1	1/1:4,15:19:22.02:451,22,0	1/1:4,12:16:13.03:363,13,0	1/1:0,21:21:48.13:531,48,0	1/1:1,12:13:33.09:365,33,0	1/1:3,13:16:6.83:283,7,0	1/1:4,13:17:13.05:372,13,0	0/0:20,0:20:41.97:0,42,365	0/0:32,0:32:83.97:0,84,729	1/1:3,12:15:30.08:328,30,0	1/1:8,16:24:31.98:567,32,0	1/1:3,11:14:30.08:332,30,0	1/1:3,17:20:48.13:531,48,0	1/1:3,21:24:66.14:716,66,0	1/1:2,4:6:18.05:199,18,0	1/1:5,24:29:43.09:691,43,0	1/1:4,17:21:28.19:531,28,0	1/1:4,23:27:57.15:630,57,0	1/1:1,6:7:18.05:199,18,0
chr10	29649412	.	A	AT	3426.72	PASS	AB=0.841;AC=42;AF=0.778;AN=54;BaseQRankSum=-0.162;DP=436;FS=1.235;HRun=15;HaplotypeScore=69.1623;InbreedingCoeff=0.0043;MQ=56.46;MQ0=6;MQRankSum=-0.497;QD=8.30;ReadPosRankSum=0.031;VQSLOD=2.8235;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:22,2:27:22.05:22,0,182	0/1:5,2:7:21.08:54,0,21	0/1:6,0:3:0:0,0,0	0/1:6,0:4:5.75:6,0,6	1/1:14,10:25:35.01:271,35,0	1/1:10,7:18:18.99:190,19,0	0/1:8,4:12:18.04:83,0,18	1/1:22,6:28:2.52:208,3,0	1/1:8,0:7:5.68:24,6,0	1/1:17,2:17:10.96:155,11,0	1/1:14,6:21:30.23:232,30,0	1/1:11,6:17:30.35:239,30,0	1/1:13,3:15:14.92:113,15,0	1/1:11,5:16:4.09:115,4,0	1/1:11,5:18:14.53:197,15,0	1/1:7,3:11:12.72:91,13,0	0/0:21,1:21:6.16:0,6,136	0/1:14,0:13:6.30:6,0,55	1/1:21,3:26:40.96:262,41,0	1/1:11,3:14:24.76:189,25,0	./.	1/1:8,3:12:11.93:111,12,0	0/1:11,2:14:16.57:89,0,17	0/1:5,7:11:1.40:145,0,1	1/1:10,5:14:18.80:164,19,0	0/1:13,5:17:12.05:125,0,12	1/1:13,4:17:16.48:216,16,0	0/1:9,4:15:23.79:119,0,24
chr10	29650162	.	T	TA	12611.89	PASS	AB=0.678;AC=48;AF=0.857;AN=56;BaseQRankSum=-5.953;DP=618;FS=1.191;HRun=10;HaplotypeScore=71.9544;InbreedingCoeff=0.4628;MQ=74.17;MQ0=0;MQRankSum=-2.214;QD=21.41;ReadPosRankSum=0.436;VQSLOD=5.7073;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,17:21:29.44:506,29,0	1/1:2,14:16:36.07:373,36,0	0/0:14,0:13:25.60:0,26,198	0/1:10,0:10:11.11:11,0,83	1/1:5,30:36:87.05:908,87,0	1/1:3,14:17:17.46:391,17,0	0/1:5,17:22:7.18:342,0,7	1/1:13,23:35:38.45:588,38,0	0/0:15,0:15:35.89:0,36,293	1/1:7,23:30:44.68:686,45,0	1/1:3,23:28:67.25:689,67,0	1/1:1,18:19:36.09:384,36,0	1/1:2,17:19:36.09:384,36,0	1/1:3,20:24:28.66:545,29,0	1/1:4,21:25:32.50:551,33,0	1/1:3,21:24:41.18:423,41,0	1/1:2,24:27:47.23:676,47,0	1/1:5,11:16:5.43:263,5,0	1/1:3,13:17:44.29:429,44,0	1/1:9,23:32:26.15:655,26,0	1/1:1,19:21:44.95:462,45,0	1/1:3,14:17:39.06:404,39,0	0/1:6,14:21:0.86:382,0,1	1/1:2,10:12:27.07:288,27,0	1/1:2,18:20:26.44:475,26,0	0/1:7,23:30:33.89:636,0,34	1/1:5,22:28:41.39:630,41,0	1/1:4,15:19:51.10:530,51,0
chr10	29651373	.	ATCTCTCTCTCTC	A	1307.61	PASS	AB=0.937;AC=20;AF=0.625;AN=32;BaseQRankSum=3.757;DP=499;FS=22.633;HRun=0;HaplotypeScore=144.8289;InbreedingCoeff=0.4191;MQ=61.53;MQ0=36;MQRankSum=-0.599;QD=7.35;ReadPosRankSum=1.973;VQSLOD=0.9881;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:15,0:16:17.29:112,0,17	./.	./.	0/0:63,0:17:0:0,0,0	0/1:13,0:14:0:0,0,0	./.	1/1:20,0:17:3.01:73,3,0	0/0:27,0:27:4.74:0,5,17	./.	1/1:6,0:8:2.21:89,2,0	./.	./.	1/1:9,2:11:2.84:14,3,0	./.	./.	1/1:9,5:15:6.02:198,6,0	0/0:21,0:19:12.04:0,12,447	0/0:19,0:17:26.99:0,27,732	1/1:17,0:22:9.01:199,9,0	./.	1/1:12,0:10:3.01:61,3,0	./.	./.	0/0:10,0:12:3.01:0,3,74	./.	1/1:16,4:20:15.03:360,15,0	1/1:18,2:20:6.02:200,6,0	1/1:15,0:16:6:119,6,0
chr10	29651429	.	CTG	C	1689.50	PASS	AB=0.963;AC=39;AF=0.780;AN=50;BaseQRankSum=0.312;DP=464;FS=1.322;HRun=0;HaplotypeScore=99.6858;InbreedingCoeff=0.2347;MQ=40.36;MQ0=65;MQRankSum=2.668;QD=4.27;ReadPosRankSum=1.527;VQSLOD=2.6896;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:13,0:15:0:0,0,0	0/1:8,0:7:15.74:16,0,16	./.	./.	./.	1/1:24,0:20:20.36:166,20,0	0/1:17,0:13:0.35:0,0,0	0/0:27,0:21:3.83:0,4,20	1/1:3,0:9:2.84:14,3,0	0/1:12,0:12:14.81:15,0,49	0/0:17,0:16:17.29:0,17,126	1/1:11,0:10:11.92:90,12,0	1/1:18,0:17:17.82:150,18,0	1/1:23,0:21:26.73:196,27,0	1/1:12,0:11:8.96:68,9,0	1/1:16,0:14:11.90:90,12,0	1/1:25,1:22:11.43:117,11,0	1/1:16,7:19:5.44:30,5,0	1/1:15,4:17:14.87:113,15,0	1/1:21,0:22:14.95:120,15,0	1/1:23,0:12:8.56:70,9,0	1/1:16,0:14:17.93:141,18,0	1/1:15,0:11:8.70:71,9,0	0/1:23,0:16:11.98:61,0,12	0/1:10,0:8:15.31:15,0,37	1/1:17,0:15:17.87:132,18,0	0/1:24,0:20:0.14:126,0,0	1/1:8,0:6:2.99:23,3,0
chr10	29654139	.	T	TG	20023.44	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-6.118;DP=540;FS=28.365;HRun=2;HaplotypeScore=66.6076;InbreedingCoeff=0.9971;MQ=73.50;MQ0=1;MQRankSum=-5.770;QD=40.62;ReadPosRankSum=4.058;VQSLOD=2.7206;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,15:17:42.09:601,42,0	1/1:0,10:10:30.10:432,30,0	0/0:15,0:15:38.99:0,39,436	0/0:10,0:8:18.88:0,19,205	1/1:2,16:18:48.16:690,48,0	1/1:5,12:17:45.14:627,45,0	1/1:3,9:12:33.09:455,33,0	1/1:1,35:36:99:1450,102,0	0/0:22,0:22:51.16:0,51,632	1/1:1,26:27:78.25:1102,78,0	1/1:2,17:19:54.18:775,54,0	1/1:1,21:22:66.22:947,66,0	1/1:1,11:12:36.12:517,36,0	1/1:0,18:18:54.18:777,54,0	1/1:3,21:24:69.22:975,69,0	1/1:0,21:21:57.09:813,57,0	1/1:2,25:27:81.25:1140,81,0	1/1:2,14:16:45.07:601,45,0	1/1:1,18:19:54.18:777,54,0	1/1:0,29:29:87.29:1251,87,0	1/1:0,12:12:36.12:514,36,0	1/1:2,13:15:39.13:561,39,0	1/1:2,16:18:51.16:714,51,0	1/1:2,12:14:39.13:558,39,0	1/1:1,29:30:87.29:1233,87,0	1/1:4,21:25:72.22:1002,72,0	1/1:1,15:16:48.16:690,48,0	1/1:1,18:19:57.19:820,57,0
chr10	29654183	.	T	TA	258.21	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-3.240;DP=550;FS=2.017;HRun=0;HaplotypeScore=137.8119;InbreedingCoeff=0.9874;MQ=83.74;MQ0=2;MQRankSum=3.061;QD=13.59;ReadPosRankSum=1.289;VQSLOD=5.1102;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:38.60:0,39,274	0/0:13,0:13:30.47:0,30,276	0/0:29,0:24:53.32:0,53,618	0/0:31,0:23:20.97:0,21,289	0/0:18,0:18:43.53:0,44,306	0/0:21,0:21:55.85:0,56,444	0/0:15,0:15:40.71:0,41,329	0/0:30,0:30:87.56:0,88,656	1/1:3,16:19:22.04:351,22,0	0/0:24,0:24:66.71:0,67,550	0/0:24,0:24:61.54:0,62,441	0/0:19,0:19:47.61:0,48,302	0/0:10,0:10:28.81:0,29,229	0/0:19,0:19:48.95:0,49,348	0/0:22,0:22:56.80:0,57,473	0/0:14,0:14:32.01:0,32,174	0/0:28,0:28:72.37:0,72,498	0/0:13,0:12:33.52:0,34,209	0/0:13,0:13:33.25:0,33,228	0/0:27,0:27:72.50:0,72,627	0/0:10,0:10:23.22:0,23,178	0/0:12,0:12:29.13:0,29,199	0/0:17,0:17:40.68:0,41,279	0/0:16,0:16:43.41:0,43,331	0/0:23,0:23:57.35:0,57,370	0/0:23,0:23:66.43:0,66,528	0/0:24,0:23:48.65:0,49,363	0/0:17,0:17:42.39:0,42,324
chr10	29654184	.	T	TA	11636.95	PASS	AB=1.000;AC=53;AF=0.946;AN=56;BaseQRankSum=-3.617;DP=559;FS=5.642;HRun=10;HaplotypeScore=100.9944;InbreedingCoeff=0.3382;MQ=82.63;MQ0=2;MQRankSum=-3.753;QD=22.04;ReadPosRankSum=3.769;VQSLOD=5.0682;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,14:21:13.44:319,13,0	1/1:4,9:13:2.39:219,2,0	0/1:27,0:23:12.05:12,0,155	0/0:30,0:23:1.30:0,1,44	1/1:4,14:18:43.87:435,44,0	1/1:8,13:21:3.91:423,4,0	1/1:3,12:15:33.08:350,33,0	1/1:8,22:30:84.20:884,84,0	1/1:19,0:19:30.78:384,31,0	1/1:9,16:25:54.10:561,54,0	1/1:3,21:24:60.03:612,60,0	1/1:4,16:20:51.09:531,51,0	1/1:3,8:11:24.06:256,24,0	1/1:3,16:19:45.11:476,45,0	1/1:9,13:22:23.47:445,23,0	1/1:3,11:14:39.08:408,39,0	1/1:4,23:27:66.17:703,66,0	1/1:3,12:14:33.08:352,33,0	1/1:3,11:14:39.10:415,39,0	1/1:12,15:27:51.08:525,51,0	1/1:4,6:10:21.04:218,21,0	1/1:2,10:12:30.04:308,30,0	1/1:3,14:17:39.10:416,39,0	1/1:4,11:15:33.08:352,33,0	1/1:12,12:25:56.93:560,57,0	1/1:7,17:24:54.11:566,54,0	1/1:4,20:23:48.12:511,48,0	1/1:7,11:18:39.07:400,39,0
chr10	29654511	.	A	AACAC	2199.45	PASS	AB=0.755;AC=36;AF=0.667;AN=54;BaseQRankSum=4.684;DP=727;FS=3.962;HRun=0;HaplotypeScore=144.3751;InbreedingCoeff=-0.4346;MQ=59.48;MQ0=12;MQRankSum=0.419;QD=3.19;ReadPosRankSum=1.022;VQSLOD=2.6695;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:41,0:38:10.46:75,0,10	1/1:3,0:10:16.47:73,16,0	0/1:46,0:20:0:0,0,0	./.	0/1:12,0:22:13.36:40,0,13	1/1:11,0:24:22.11:102,22,0	0/1:21,0:38:57.35:57,0,68	0/1:21,0:20:69.42:102,0,69	1/1:9,12:23:20.42:433,20,0	1/1:16,0:23:18.10:126,18,0	0/1:15,0:27:27.33:54,0,27	0/1:14,0:29:27.34:54,0,27	0/1:12,0:29:13.56:102,0,14	1/1:16,1:29:24.97:170,25,0	0/1:14,0:23:13.06:13,0,56	0/1:11,0:25:57.35:57,0,112	1/1:16,3:20:11.95:141,12,0	1/1:11,0:14:6.49:97,6,0	0/1:21,0:28:7.81:94,0,8	1/1:12,0:20:13.72:61,14,0	0/1:33,0:51:6.35:54,0,6	0/1:13,0:27:22.16:71,0,22	0/1:12,0:16:16.08:16,0,16	0/1:11,0:29:41.27:89,0,41	0/1:13,0:25:29.82:59,0,30	0/1:17,0:27:14.69:183,0,15	0/1:12,0:13:14.01:14,0,169	1/1:2,0:6:2.74:12,3,0
chr10	29656437	.	TA	T	6183.62	PASS	AB=1.000;AC=55;AF=0.982;AN=56;BaseQRankSum=-0.236;DP=384;FS=0.000;HRun=1;HaplotypeScore=143.7985;InbreedingCoeff=0.0155;MQ=56.92;MQ0=0;MQRankSum=-2.253;QD=16.10;ReadPosRankSum=2.843;VQSLOD=5.1084;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,0:10:23.63:160,24,0	1/1:5,0:5:14.73:96,15,0	1/1:2,3:5:10.77:50,11,0	0/1:5,0:5:15.54:16,0,17	1/1:28,0:28:71.27:503,71,0	1/1:23,0:23:68.31:475,68,0	1/1:10,0:10:26.53:177,27,0	1/1:40,0:40:19.99:426,20,0	1/1:18,0:18:41.30:274,41,0	1/1:10,0:10:23.59:163,24,0	1/1:18,0:18:44.16:296,44,0	1/1:17,0:17:44.38:302,44,0	1/1:11,1:12:29.54:215,30,0	1/1:13,0:13:35.63:258,36,0	1/1:9,0:9:17.75:123,18,0	1/1:10,0:10:26.27:161,26,0	1/1:11,0:11:29.55:201,30,0	1/1:12,0:12:32.40:211,32,0	1/1:12,0:12:31.85:184,32,0	1/1:26,0:26:58.84:385,59,0	1/1:5,0:5:8.87:60,9,0	1/1:8,0:8:20.82:146,21,0	1/1:8,0:8:23.59:156,24,0	1/1:7,0:7:11.64:74,12,0	1/1:14,0:14:32.29:209,32,0	1/1:18,0:17:49.84:316,50,0	1/1:18,1:18:56.07:383,56,0	1/1:11,0:11:26.44:167,26,0
chr10	29656931	.	CAA	C	930.44	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.856;DP=660;FS=0.825;HRun=2;HaplotypeScore=82.0962;InbreedingCoeff=0.9959;MQ=77.31;MQ0=0;MQRankSum=-2.777;QD=37.22;ReadPosRankSum=1.865;VQSLOD=3.8737;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:78.19:0,78,1437	0/0:8,0:8:24.07:0,24,452	0/0:34,0:31:87.12:0,87,1452	0/0:45,0:36:59.08:0,59,948	0/0:28,0:28:84.23:0,84,1552	0/0:22,0:22:66.21:0,66,1270	0/0:20,0:20:60.20:0,60,1182	0/0:29,0:29:87.27:0,87,1621	1/1:0,25:25:63.22:1025,63,0	0/0:19,0:19:57.19:0,57,1113	0/0:25,0:25:75.25:0,75,1487	0/0:18,0:18:54.19:0,54,1095	0/0:21,0:21:63.21:0,63,1233	0/0:18,0:18:54.19:0,54,1086	0/0:22,0:22:66.23:0,66,1340	0/0:27,0:27:81.26:0,81,1601	0/0:19,0:19:51.14:0,51,967	0/0:18,0:18:54.19:0,54,1094	0/0:19,0:19:57.19:0,57,1116	0/0:31,0:31:93.32:0,93,1854	0/0:15,0:15:42.11:0,42,748	0/0:35,0:35:99:0,102,2022	0/0:28,0:28:84.26:0,84,1599	0/0:20,0:20:60.21:0,60,1214	0/0:25,0:25:75.24:0,75,1487	0/0:24,0:24:72.23:0,72,1386	0/0:29,0:29:87.30:0,87,1750	0/0:8,0:8:24.08:0,24,461
chr10	29659191	.	G	GA	3698.04	PASS	AB=0.759;AC=40;AF=0.714;AN=56;BaseQRankSum=0.432;DP=682;FS=6.025;HRun=15;HaplotypeScore=103.1974;InbreedingCoeff=-0.0861;MQ=71.81;MQ0=5;MQRankSum=0.228;QD=6.01;ReadPosRankSum=-2.378;VQSLOD=2.1666;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:27,6:32:7.98:219,0,8	1/1:0,9:9:13.73:111,14,0	1/1:34,0:18:4.75:41,5,0	0/0:27,0:19:7.31:0,7,70	0/1:21,2:24:12.25:121,0,12	0/1:4,11:15:18.55:61,0,19	0/1:17,4:21:11.49:116,0,11	1/1:22,7:28:37.68:327,38,0	1/1:10,1:12:2.44:98,2,0	1/1:23,7:30:21.27:245,21,0	1/1:10,10:22:2.52:86,3,0	1/1:24,0:24:20.64:164,21,0	0/1:5,16:22:23.77:59,0,24	0/1:5,14:20:9.18:31,0,9	0/1:9,17:27:9.43:18,0,9	1/1:7,19:28:15.30:205,15,0	0/0:39,0:40:74.63:0,75,429	0/1:15,2:17:12.05:12,0,158	0/1:24,2:28:21.21:98,0,21	1/1:10,20:31:13.47:272,13,0	0/1:14,2:16:2.25:64,0,2	0/1:14,14:28:23.19:75,0,23	1/1:10,9:19:5.24:32,5,0	1/1:25,4:29:32.48:335,32,0	1/1:16,3:20:12.63:258,13,0	1/1:25,2:27:36.12:272,36,0	1/1:21,3:23:8.44:157,8,0	0/1:18,4:22:9.63:223,0,10
chr10	29662227	.	GA	G	394.96	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.190;DP=554;FS=0.000;HRun=7;HaplotypeScore=52.9614;InbreedingCoeff=0.8920;MQ=79.40;MQ0=0;MQRankSum=-3.022;QD=19.75;ReadPosRankSum=1.508;VQSLOD=2.9993;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:90.23:0,90,1089	0/0:5,0:5:15.05:0,15,189	0/0:15,0:15:42.12:0,42,500	0/0:12,0:12:36.03:0,36,381	0/0:18,0:18:45.14:0,45,566	0/0:22,0:22:57.18:0,57,717	0/0:18,0:18:48.15:0,48,604	0/0:30,0:30:84.24:0,84,1021	1/1:3,17:20:48.11:490,48,0	0/0:19,0:19:51.14:0,51,625	0/0:12,0:12:36.10:0,36,430	0/0:21,0:21:63.20:0,63,792	0/0:24,0:24:66.19:0,66,815	0/0:21,0:21:57.18:0,57,716	0/0:27,0:27:81.24:0,81,995	0/0:20,0:20:60.18:0,60,742	0/0:32,0:32:90.26:0,90,1105	0/0:17,0:17:45.14:0,45,566	0/0:19,0:19:54.14:0,54,662	0/0:21,0:21:57.16:0,57,692	0/0:22,0:22:60.19:0,60,755	0/0:16,0:16:48.15:0,48,604	0/0:13,0:13:36.12:0,36,453	0/0:26,0:25:72.22:0,72,894	0/0:15,0:15:39.10:0,39,465	0/0:21,0:21:45.14:0,45,555	0/0:32,0:32:90.29:0,90,1131	0/0:3,0:3:6.02:0,6,75
chr10	29663561	.	CT	C	1190.30	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.765;DP=802;FS=7.988;HRun=2;HaplotypeScore=96.4053;InbreedingCoeff=1.0000;MQ=83.84;MQ0=0;MQRankSum=-0.583;QD=34.01;ReadPosRankSum=0.445;VQSLOD=3.2905;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,150,2178	0/0:16,0:16:48.14:0,48,695	0/0:22,0:22:63.20:0,63,920	0/0:29,0:29:75.26:0,75,1130	0/0:24,0:24:69.22:0,69,1012	0/0:28,0:28:84.28:0,84,1256	0/0:30,0:30:90.30:0,90,1348	0/0:28,0:28:84.27:0,84,1239	1/1:0,35:35:99:1285,99,0	0/0:36,0:36:99:0,108,1616	0/0:23,0:23:69.23:0,69,1033	0/0:35,0:35:99:0,105,1555	0/0:27,0:27:81.26:0,81,1193	0/0:26,0:26:78.26:0,78,1169	0/0:46,0:46:99:0,138,2029	0/0:25,0:25:75.25:0,75,1122	0/0:21,0:21:60.20:0,60,899	0/0:19,0:19:57.17:0,57,832	0/0:19,0:19:54.18:0,54,810	0/0:26,0:26:75.24:0,75,1104	0/0:31,0:31:93.30:0,93,1371	0/0:38,0:38:99:0,114,1687	0/0:19,0:19:54.17:0,54,786	0/0:42,0:42:99:0,123,1820	0/0:25,0:25:72.24:0,72,1076	0/0:35,0:35:99:0,105,1554	0/0:28,0:27:84.28:0,84,1259	0/0:18,0:18:54.15:0,54,767
chr10	29664218	.	GA	G	693.05	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=1.576;DP=685;FS=9.003;HRun=4;HaplotypeScore=166.8847;InbreedingCoeff=0.7812;MQ=75.44;MQ0=0;MQRankSum=-5.516;QD=27.72;ReadPosRankSum=2.137;VQSLOD=1.6885;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:32.92:0,33,355	0/0:8,0:8:18.06:0,18,251	0/0:32,0:32:84.27:0,84,1129	0/0:27,0:27:78.24:0,78,1024	0/0:22,0:22:48.16:0,48,670	0/0:21,0:21:20.64:0,21,244	0/0:23,0:23:63.15:0,63,843	0/0:30,0:30:75.04:0,75,1032	1/1:1,24:25:66.20:788,66,0	0/0:28,0:28:78.25:0,78,1074	0/0:22,0:22:39.08:0,39,512	0/0:25,0:25:15.04:0,15,195	0/0:24,0:24:11.63:0,12,133	0/0:31,0:31:30.09:0,30,403	0/0:38,0:38:18.06:0,18,234	0/0:15,0:15:12.04:0,12,168	0/0:30,0:30:21.03:0,21,272	0/0:25,0:25:27.05:0,27,356	0/0:12,0:12:33.11:0,33,462	0/0:21,0:21:35.85:0,36,457	0/0:33,0:33:72.23:0,72,991	0/0:27,0:27:48.08:0,48,649	0/0:16,0:16:9.28:0,9,127	0/0:31,0:31:18.02:0,18,230	0/0:15,0:15:6.02:0,6,84	0/0:22,0:22:57.19:0,57,798	0/0:29,0:29:27.08:0,27,359	0/0:13,0:13:39.13:0,39,546
chr10	29664233	.	CAAT	C	275.71	PASS	AB=0.994;AC=17;AF=0.304;AN=56;BaseQRankSum=7.939;DP=732;FS=4.207;HRun=0;HaplotypeScore=180.7305;InbreedingCoeff=0.0046;MQ=69.99;MQ0=2;MQRankSum=-8.296;QD=0.78;ReadPosRankSum=5.389;VQSLOD=2.4437;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:58:6:0,6,53	0/1:8,0:8:21.66:22,0,23	0/0:24,0:24:69.17:0,69,1289	0/0:27,0:25:65.22:0,65,1159	0/0:18,0:18:32.61:0,33,219	0/1:28,0:28:31.87:32,0,36	0/0:22,0:22:31.91:0,32,156	0/0:26,0:26:31.88:0,32,116	1/1:6,14:20:18.03:204,18,0	0/0:30,0:30:34.44:0,34,116	0/0:25,0:25:24.29:0,24,194	0/0:34,0:34:5.48:0,5,48	1/1:24,0:24:5.17:25,5,0	0/1:29,0:29:18.09:20,0,18	0/1:44,0:44:15.30:15,0,58	0/1:22,0:22:8.33:8,0,20	0/1:38,0:38:2.94:3,0,20	0/1:28,0:28:16.11:16,0,56	0/1:14,1:15:27.07:27,0,90	0/0:22,0:22:1.83:0,2,115	0/0:33,0:33:53.01:0,53,259	0/0:26,0:26:35.13:0,35,218	0/1:15,0:15:2.17:2,0,42	0/1:38,0:38:15.95:23,0,16	1/1:17,0:17:2.68:11,3,0	0/0:26,0:26:12.30:0,12,64	0/1:27,0:27:25.59:26,0,55	0/0:8,0:8:11.74:0,12,34
chr10	29664234	.	AATGACGACGACGACGACGACGACGACG	A	13467.03	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=4.481;DP=713;FS=2.977;HRun=0;HaplotypeScore=296.3603;InbreedingCoeff=0.5369;MQ=70.27;MQ0=2;MQRankSum=-5.599;QD=20.34;ReadPosRankSum=3.959;VQSLOD=2.6467;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:3,0:58:5.94:41,6,0	1/1:0,8:8:9.03:655,9,0	0/0:24,0:24:43.23:0,43,658	0/0:27,0:25:64.23:0,64,720	1/1:0,16:17:6.02:245,6,0	1/1:1,26:27:12.04:873,12,0	1/1:22,0:22:44.76:342,45,0	1/1:26,0:26:50.31:415,50,0	1/1:20,0:20:17.79:164,18,0	1/1:17,13:30:75.63:750,76,0	1/1:0,23:23:9.03:527,9,0	1/1:0,32:32:4.37:151,4,0	1/1:0,24:24:5.74:433,6,0	1/1:0,28:28:18.06:1121,18,0	1/1:2,41:43:15.94:949,16,0	1/1:0,21:21:3.01:219,3,0	1/1:0,37:37:6.02:397,6,0	1/1:1,25:26:9.03:658,9,0	1/1:1,11:12:29.86:398,30,0	1/1:0,22:22:21.01:911,21,0	1/1:33,0:33:47.70:416,48,0	1/1:1,25:26:6.02:295,6,0	1/1:0,13:13:2.62:215,3,0	1/1:1,37:38:9.03:655,9,0	1/1:0,17:17:6.02:367,6,0	1/1:0,26:26:61.60:668,62,0	1/1:1,24:25:20.90:1349,21,0	1/1:8,0:8:23.74:251,24,0
chr10	29664484	.	A	AAAAC	330.64	PASS	AB=0.870;AC=2;AF=0.036;AN=56;BaseQRankSum=6.021;DP=599;FS=5.931;HRun=0;HaplotypeScore=99.1843;InbreedingCoeff=-0.0353;MQ=64.67;MQ0=1;MQRankSum=-2.727;QD=8.48;ReadPosRankSum=0.196;VQSLOD=1.9527;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:57:99:0,155,2731	0/0:8,0:8:21.07:0,21,304	0/0:16,0:12:23.30:0,23,338	0/1:19,0:13:9.16:9,0,212	0/0:19,0:19:57.19:0,57,923	0/0:15,0:15:45.15:0,45,806	0/0:18,0:18:54.16:0,54,811	0/0:40,0:40:99:0,108,1721	0/1:13,7:20:99:404,0,109	0/0:27,0:27:69.22:0,69,1107	0/0:13,0:13:39.12:0,39,588	0/0:23,0:23:66.22:0,66,1159	0/0:21,0:21:63.17:0,63,991	0/0:19,0:19:54.18:0,54,907	0/0:24,0:24:72.24:0,72,1155	0/0:19,0:19:54.17:0,54,876	0/0:36,0:36:99:0,105,1612	0/0:33,0:33:93.31:0,93,1521	0/0:11,0:10:29.92:0,30,388	0/0:9,0:9:27.09:0,27,454	0/0:24,0:24:69.20:0,69,1101	0/0:17,0:17:45.14:0,45,714	0/0:12,0:12:33.07:0,33,510	0/0:23,0:23:66.22:0,66,1030	0/0:15,0:15:39.13:0,39,634	0/0:21,0:21:54.17:0,54,860	0/0:24,0:24:66.19:0,66,1002	0/0:15,0:15:45.12:0,45,728
chr10	29664840	.	C	CATATATATATATATATAT	10784.60	PASS	AB=1.000;AC=30;AF=0.882;AN=34;BaseQRankSum=-1.507;DP=172;FS=8.425;HRun=0;HaplotypeScore=87.5968;InbreedingCoeff=0.2230;MQ=92.00;MQ0=0;MQRankSum=-4.898;QD=78.72;ReadPosRankSum=2.556;VQSLOD=3.9403;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:14:15.05:579,15,0	./.	0/0:9,0:9:12.04:0,12,387	0/1:20,0:18:15.84:16,0,604	./.	1/1:3,1:4:9.03:738,9,0	./.	1/1:33,0:31:51.12:2514,51,0	0/1:5,0:5:7.46:7,0,158	1/1:6,0:6:12.04:488,12,0	./.	1/1:4,0:4:3:25,3,0	./.	./.	1/1:2,0:2:3.01:256,3,0	./.	1/1:8,0:10:6.02:460,6,0	1/1:9,0:9:18.06:1272,18,0	1/1:4,1:6:15.05:1128,15,0	1/1:1,1:3:3.01:256,3,0	./.	1/1:1,0:1:3:25,3,0	./.	./.	1/1:4,0:4:6.01:262,6,0	./.	1/1:5,1:6:12.04:948,12,0	1/1:8,0:9:24.08:1808,24,0
chr10	29664849	.	ATATACAATCATGGGAAGAAGTGGG	A	319.61	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=0.621;DP=182;FS=8.101;HRun=0;HaplotypeScore=109.8355;InbreedingCoeff=0.2491;MQ=82.52;MQ0=0;MQRankSum=-0.179;QD=53.27;ReadPosRankSum=0.550;VQSLOD=2.2636;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:14:33.11:0,33,1885	0/0:1,0:1:3.01:0,3,291	0/0:8,0:8:21.07:0,21,1481	0/0:18,0:16:42.26:0,42,2316	0/0:4,0:4:12.02:0,12,581	0/0:3,0:3:3.01:0,3,128	0/0:4,0:4:6.02:0,6,491	0/0:30,0:28:81.28:0,81,4441	1/1:1,5:6:6.02:399,6,0	0/0:5,0:5:12.04:0,12,1037	0/0:1,0:1:3.01:0,3,194	0/0:6,0:6:15.05:0,15,745	0/0:3,0:3:3.01:0,3,194	0/0:4,0:3:9.03:0,9,579	0/0:3,0:3:6.02:0,6,402	0/0:3,0:3:9.03:0,9,611	0/0:9,0:9:12.04:0,12,739	0/0:8,0:8:18.53:0,19,1085	0/0:10,0:10:30.10:0,30,1960	0/0:4,0:4:12.04:0,12,832	0/0:2,0:2:3.01:0,3,315	0/0:4,0:4:9.50:0,10,874	0/0:3,0:3:9.03:0,9,616	0/0:6,0:6:6.02:0,6,586	0/0:5,0:5:9.03:0,9,676	0/0:3,0:3:9.03:0,9,679	0/0:6,0:6:15.05:0,15,1209	0/0:8,0:8:21.07:0,21,1379
chr10	29665011	.	A	AT	11149.29	PASS	AC=54;AF=0.964;AN=56;BaseQRankSum=0.820;DP=311;FS=0.000;HRun=4;HaplotypeScore=195.0458;InbreedingCoeff=0.5162;MQ=39.47;MQ0=0;MQRankSum=-1.706;QD=35.97;ReadPosRankSum=1.269;VQSLOD=3.1284;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,9:11:24.04:322,24,0	1/1:0,4:4:12.04:179,12,0	1/1:0,2:2:6.02:90,6,0	0/0:1,0:1:2.96:0,3,19	1/1:3,19:22:42.11:627,42,0	1/1:2,6:8:18.06:250,18,0	1/1:1,7:8:18.06:269,18,0	1/1:7,14:21:63.17:900,63,0	1/1:3,10:13:27.05:378,27,0	1/1:0,12:11:30.10:432,30,0	1/1:0,9:9:21.03:288,21,0	1/1:3,12:15:36.12:537,36,0	1/1:2,14:16:45.15:662,45,0	1/1:4,11:15:42.03:544,42,0	1/1:2,17:19:51.17:741,51,0	1/1:2,16:18:48.13:693,48,0	1/1:2,4:6:17.98:220,18,0	1/1:2,1:3:3.01:45,3,0	1/1:3,10:13:39.13:565,39,0	1/1:1,9:10:27.05:378,27,0	1/1:2,8:10:9.03:134,9,0	1/1:1,8:9:24.04:333,24,0	1/1:1,5:6:17.97:218,18,0	1/1:1,8:9:20.98:263,21,0	1/1:0,9:9:27.09:403,27,0	1/1:3,12:15:39.13:582,39,0	1/1:1,17:16:51.17:751,51,0	1/1:0,7:8:24.08:344,24,0
chr10	29665034	.	TA	T	9266.65	PASS	AC=52;AF=1.000;AN=52;DP=325;FS=0.000;HRun=4;HaplotypeScore=233.1293;InbreedingCoeff=-0.0148;MQ=32.17;MQ0=0;QD=28.60;VQSLOD=2.7667;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,13:12:24.07:285,24,0	1/1:1,1:2:3.01:36,3,0	./.	./.	1/1:0,24:24:30.06:359,30,0	1/1:0,9:9:24.07:284,24,0	1/1:0,11:11:30.09:353,30,0	1/1:5,14:19:39.12:468,39,0	1/1:0,13:13:33.10:395,33,0	1/1:1,10:10:27.04:308,27,0	1/1:1,8:9:18.05:215,18,0	1/1:0,22:22:63.19:754,63,0	1/1:0,17:17:48.15:573,48,0	1/1:0,12:12:33.10:393,33,0	1/1:1,23:24:63.19:752,63,0	1/1:2,23:25:69.21:824,69,0	1/1:0,7:7:21.06:248,21,0	1/1:0,4:4:12.04:144,12,0	1/1:1,14:15:42.13:503,42,0	1/1:1,10:11:21.06:251,21,0	1/1:1,7:8:15.05:180,15,0	1/1:1,6:7:12.03:144,12,0	1/1:1,4:5:9.03:108,9,0	1/1:1,8:9:15.05:179,15,0	1/1:0,11:11:27.08:323,27,0	1/1:1,14:15:42.13:503,42,0	1/1:0,18:18:48.15:575,48,0	1/1:0,3:3:9.03:108,9,0
chr10	29665727	.	G	GCCATATGGCCAGCAGAC	25380.95	PASS	AB=0.800;AC=55;AF=0.982;AN=56;BaseQRankSum=-0.271;DP=265;FS=23.962;HRun=0;HaplotypeScore=312.3482;InbreedingCoeff=-0.0409;MQ=58.58;MQ0=0;MQRankSum=-2.801;QD=95.78;ReadPosRankSum=2.247;VQSLOD=3.5467;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:15:24.04:1254,24,0	1/1:4,0:4:9.03:423,9,0	1/1:3,1:6:9.41:681,9,0	0/1:3,0:4:25.54:109,0,26	1/1:10,0:10:3:25,3,0	1/1:11,0:11:30.06:1808,30,0	1/1:7,0:7:12.04:690,12,0	1/1:9,0:9:27.07:1262,27,0	1/1:13,0:13:18.06:1177,18,0	1/1:7,0:7:18.06:961,18,0	1/1:10,0:10:21.06:961,21,0	1/1:13,0:13:18.06:843,18,0	1/1:13,0:13:24.08:1642,24,0	1/1:13,0:13:24.02:776,24,0	1/1:14,0:14:21.07:1079,21,0	1/1:14,0:14:27.09:1731,27,0	1/1:10,0:10:12.04:683,12,0	1/1:5,0:5:15.05:948,15,0	1/1:11,0:11:27.09:1385,27,0	1/1:9,0:9:15.05:667,15,0	1/1:6,0:6:12.04:439,12,0	1/1:11,0:11:21.04:825,21,0	1/1:6,0:6:6.02:375,6,0	1/1:9,0:9:12.04:601,12,0	1/1:8,0:8:15.01:844,15,0	1/1:11,0:11:18.06:979,18,0	1/1:12,0:12:33.07:1598,33,0	1/1:4,0:4:9.03:613,9,0
chr10	29669601	.	C	CAAAT	675.31	PASS	AB=0.909;AC=3;AF=0.054;AN=56;BaseQRankSum=-3.968;DP=697;FS=6.497;HRun=0;HaplotypeScore=162.1278;InbreedingCoeff=0.5663;MQ=58.42;MQ0=2;MQRankSum=-0.823;QD=21.78;ReadPosRankSum=1.388;VQSLOD=2.9943;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:66.16:0,66,1053	0/0:10,0:10:30.04:0,30,408	0/0:10,0:7:2.18:0,2,50	0/1:9,0:8:23.54:24,0,112	0/0:24,0:24:60.14:0,60,924	0/0:26,0:26:57.11:0,57,870	0/0:19,0:19:54.08:0,54,768	0/0:38,0:38:81.01:0,81,1002	1/1:4,17:21:30.10:757,30,0	0/0:30,0:30:75.22:0,75,1186	0/0:20,0:20:51.13:0,51,780	0/0:26,0:26:63.14:0,63,936	0/0:29,0:29:66.14:0,66,1000	0/0:30,0:30:78.11:0,78,1070	0/0:34,0:34:87.17:0,87,1276	0/0:19,0:20:45.10:0,45,665	0/0:27,0:27:66.05:0,66,821	0/0:26,0:26:65.88:0,66,953	0/0:26,0:26:68.14:0,68,872	0/0:36,0:36:87.13:0,87,1274	0/0:28,0:28:78.13:0,78,1112	0/0:20,0:20:48.13:0,48,767	0/0:25,0:25:54.40:0,54,799	0/0:27,0:27:63.11:0,63,891	0/0:19,0:19:42.09:0,42,619	0/0:35,0:36:96.06:0,96,1460	0/0:29,0:29:72.18:0,72,1126	0/0:20,0:20:51.13:0,51,822
chr10	29669957	.	TA	T	243.99	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.485;DP=619;FS=9.353;HRun=10;HaplotypeScore=64.2647;InbreedingCoeff=0.8092;MQ=74.49;MQ0=0;MQRankSum=-1.493;QD=14.35;ReadPosRankSum=0.205;VQSLOD=3.0185;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:59.98:0,60,637	0/0:8,1:9:1.02:0,1,239	0/0:19,0:17:36.18:0,36,357	0/0:17,0:17:25.61:0,26,236	0/0:29,1:31:58:0,58,850	0/0:21,0:22:53.98:0,54,578	0/0:13,0:13:36.10:0,36,398	0/0:32,0:32:77.22:0,77,821	1/1:2,15:17:38.99:339,39,0	0/0:28,0:28:72.19:0,72,788	0/0:17,0:17:42.09:0,42,449	0/0:20,0:20:45.09:0,45,480	0/0:22,1:23:40.11:0,40,662	0/0:22,0:22:57.15:0,57,630	0/0:30,1:31:58.16:0,58,862	0/0:20,0:20:57.14:0,57,622	0/0:24,0:24:63.12:0,63,674	0/0:21,0:21:57.11:0,57,608	0/0:29,0:29:72.18:0,72,784	0/0:26,0:27:66.01:0,66,711	0/0:20,0:21:56.92:0,57,582	0/0:17,0:17:42.09:0,42,454	0/0:23,0:23:63.14:0,63,680	0/0:18,0:17:45.12:0,45,498	0/0:16,0:16:42.11:0,42,465	0/0:23,1:25:36.93:0,37,604	0/0:29,1:30:52.09:0,52,764	0/0:22,1:23:31.07:0,31,550
chr10	29670378	.	T	TCTC	512.91	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=1.514;DP=693;FS=6.622;HRun=0;HaplotypeScore=109.3479;InbreedingCoeff=0.9722;MQ=77.82;MQ0=3;MQRankSum=0.114;QD=42.74;ReadPosRankSum=-1.921;VQSLOD=4.4150;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,123,1976	0/0:6,0:6:15.05:0,15,241	0/0:38,0:29:65.86:0,66,898	0/0:53,0:40:16.46:0,16,1036	0/0:23,0:23:66.23:0,66,1061	0/0:15,0:15:45.15:0,45,723	0/0:25,0:25:66.22:0,66,1042	0/0:43,0:43:99:0,111,1643	1/1:2,10:11:30.10:607,30,0	0/0:23,0:23:66.22:0,66,1060	0/0:16,0:16:45.15:0,45,720	0/0:39,0:39:99:0,111,1745	0/0:29,0:29:81.26:0,81,1278	0/0:16,0:16:48.16:0,48,771	0/0:24,0:24:69.22:0,69,1064	0/0:24,0:24:69.20:0,69,1035	0/0:26,0:26:72.22:0,72,1127	0/0:26,0:26:69.20:0,69,1070	0/0:17,0:17:48.16:0,48,771	0/0:23,0:23:66.21:0,66,1016	0/0:39,0:38:99:0,108,1711	0/0:17,0:17:51.17:0,51,796	0/0:21,0:21:57.18:0,57,892	0/0:26,0:26:66.22:0,66,1051	0/0:11,0:11:30.10:0,30,482	0/0:20,0:20:51.14:0,51,723	0/0:24,0:24:69.24:0,69,1109	0/0:11,0:11:33.11:0,33,530
chr10	29670427	.	A	AC	489.45	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.462;DP=654;FS=4.851;HRun=5;HaplotypeScore=64.0344;InbreedingCoeff=0.9694;MQ=86.85;MQ0=0;MQRankSum=-2.596;QD=30.59;ReadPosRankSum=2.396;VQSLOD=4.5025;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,108,1152	0/0:13,0:13:39.10:0,39,419	0/0:28,0:28:71.04:0,71,790	0/0:22,0:22:54.11:0,54,564	0/0:22,0:22:54.13:0,54,580	0/0:12,0:12:33.08:0,33,355	0/0:30,0:30:78.19:0,78,838	0/0:25,0:25:60.10:0,60,626	1/1:1,15:16:45.15:584,45,0	0/0:25,0:24:69.17:0,69,737	0/0:10,0:10:30.08:0,30,322	0/0:31,0:31:87.19:0,87,919	0/0:22,0:22:63.16:0,63,677	0/0:20,0:20:57.14:0,57,612	0/0:23,0:23:66.15:0,66,701	0/0:31,1:32:54.09:0,54,928	0/0:25,0:25:75.19:0,75,806	0/0:30,0:30:87.15:0,87,909	0/0:26,0:26:54.12:0,54,580	0/0:17,0:17:42.07:0,42,435	0/0:45,0:45:99:0,117,1256	0/0:21,0:21:57.14:0,57,612	0/0:26,0:26:69.17:0,69,737	0/0:18,0:18:45.11:0,45,483	0/0:20,0:20:60.15:0,60,645	0/0:21,0:21:60.07:0,60,620	0/0:29,0:28:78.19:0,78,837	0/0:6,0:6:12.03:0,12,129
chr10	29673395	.	TTGTGTGTGTGTGTGTGTG	T	10144.12	PASS	AB=0.823;AC=49;AF=0.875;AN=56;BaseQRankSum=4.035;DP=595;FS=1.276;HRun=0;HaplotypeScore=275.5664;InbreedingCoeff=0.1980;MQ=71.49;MQ0=10;MQRankSum=1.198;QD=19.40;ReadPosRankSum=2.988;VQSLOD=3.0761;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:21,2:27:13.85:461,14,0	1/1:10,0:11:3.01:126,3,0	0/0:33,0:25:6.02:0,6,117	0/0:39,0:35:9.03:0,9,157	1/1:15,4:18:6.02:128,6,0	1/1:15,4:19:9.03:363,9,0	0/1:19,7:26:34.65:261,0,35	1/1:20,0:20:9.75:158,10,0	1/1:8,0:19:33.11:1382,33,0	1/1:14,2:16:6.02:290,6,0	1/1:7,5:12:12.04:524,12,0	1/1:15,7:21:15.05:725,15,0	1/1:11,5:17:12.04:561,12,0	1/1:10,5:15:11.74:401,12,0	1/1:18,1:19:3.01:145,3,0	1/1:19,3:27:24.08:1037,24,0	0/1:18,7:24:62.69:139,0,63	1/1:13,0:13:1.63:37,2,0	1/1:14,1:14:6.02:271,6,0	1/1:11,4:16:6.02:152,6,0	1/1:28,5:33:3:74,3,0	1/1:16,4:20:11.36:278,11,0	1/1:15,3:18:3.01:105,3,0	1/1:19,3:25:9.03:285,9,0	1/1:17,3:23:24.06:828,24,0	1/1:24,6:30:15.93:624,16,0	1/1:11,5:16:15.05:651,15,0	0/1:13,1:14:99:137,0,125
chr10	29678071	.	A	ACATT	32705.43	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-6.600;DP=537;FS=8.880;HRun=0;HaplotypeScore=69.4176;InbreedingCoeff=0.9835;MQ=69.47;MQ0=1;MQRankSum=-4.530;QD=64.51;ReadPosRankSum=3.615;VQSLOD=6.9311;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,16:17:45.11:1140,45,0	1/1:1,14:14:42.14:1078,42,0	0/0:6,0:5:15.03:0,15,236	0/0:15,0:15:27.09:0,27,463	1/1:5,22:27:63.22:1645,63,0	1/1:2,26:29:69.19:1779,69,0	1/1:4,16:20:54.19:1373,54,0	1/1:13,22:37:99:2436,102,0	0/0:9,0:9:24.08:0,24,448	1/1:2,19:24:69.21:1698,69,0	1/1:2,24:27:63.22:1645,63,0	1/1:2,16:19:48.16:1263,48,0	1/1:2,16:19:48.16:1254,48,0	1/1:0,8:8:24.08:639,24,0	1/1:6,12:18:48.08:1125,48,0	1/1:2,22:23:60.21:1566,60,0	1/1:3,27:30:81.28:2157,81,0	1/1:0,19:20:54.19:1440,54,0	1/1:8,7:16:36.12:832,36,0	1/1:3,17:20:54.18:1291,54,0	1/1:1,7:8:15.05:366,15,0	1/1:0,8:8:24.08:640,24,0	1/1:3,10:13:26.84:717,27,0	1/1:2,10:12:19.19:556,19,0	1/1:3,17:21:57.20:1483,57,0	1/1:8,21:30:66.23:1685,66,0	1/1:2,20:27:63.17:1617,63,0	1/1:0,16:16:48.16:1280,48,0
chr10	29678640	.	T	TC	19436.33	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-7.562;DP=643;FS=0.571;HRun=4;HaplotypeScore=64.5265;InbreedingCoeff=0.9860;MQ=79.87;MQ0=0;MQRankSum=-5.769;QD=33.11;ReadPosRankSum=4.950;VQSLOD=5.1910;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,28:30:75.25:1012,75,0	1/1:0,7:7:14.94:199,15,0	0/0:25,0:25:59.73:0,60,551	0/0:12,0:12:14.69:0,15,184	1/1:2,32:34:84.15:1094,84,0	1/1:1,39:40:93.31:1250,93,0	1/1:3,15:18:29.56:465,30,0	1/1:4,28:32:78.15:958,78,0	0/0:19,0:19:54.09:0,54,586	1/1:1,25:26:72.23:960,72,0	1/1:1,22:23:54.18:732,54,0	1/1:3,17:20:51.17:681,51,0	1/1:1,22:23:63.21:854,63,0	1/1:0,26:26:69.23:928,69,0	1/1:0,24:24:63.21:853,63,0	1/1:0,21:21:54.18:726,54,0	1/1:0,22:22:51.17:687,51,0	1/1:0,7:7:21.07:285,21,0	1/1:2,17:19:45.11:591,45,0	1/1:2,30:32:84.21:1117,84,0	1/1:1,26:27:60.20:816,60,0	1/1:1,23:24:60.20:814,60,0	1/1:2,18:20:41.52:569,42,0	1/1:1,22:23:54.18:734,54,0	1/1:0,28:28:72.17:950,72,0	1/1:0,21:21:63.18:823,63,0	1/1:2,29:31:71.33:969,71,0	1/1:0,9:9:27.09:367,27,0
chr10	29680701	.	T	TG	7829.59	PASS	AB=0.615;AC=46;AF=0.821;AN=56;BaseQRankSum=-6.020;DP=417;FS=30.592;HRun=9;HaplotypeScore=52.6602;InbreedingCoeff=0.4559;MQ=76.25;MQ0=0;MQRankSum=-2.703;QD=20.50;ReadPosRankSum=1.832;VQSLOD=3.2798;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,19:27:25.08:505,25,0	1/1:5,7:12:15.04:165,15,0	0/0:12,0:11:13.68:0,14,99	0/0:13,0:13:3.44:0,3,133	1/1:4,14:18:12.98:344,13,0	1/1:1,13:14:33.09:365,33,0	1/1:6,18:26:13.74:566,14,0	0/1:9,6:15:7.87:164,0,8	0/0:5,0:10:10.17:0,10,30	1/1:3,9:12:1.12:238,1,0	1/1:0,9:9:21.06:232,21,0	1/1:3,15:18:42.11:465,42,0	1/1:2,4:6:11.40:108,11,0	1/1:2,9:11:21.06:232,21,0	1/1:1,9:11:24.95:267,25,0	0/1:3,7:10:5:178,0,5	1/1:7,30:37:35.11:834,35,0	1/1:5,17:21:14.29:375,14,0	1/1:4,7:11:24.02:252,24,0	0/1:3,8:11:5.04:165,0,5	1/1:4,9:14:29.91:313,30,0	1/1:5,11:16:27.48:299,27,0	0/1:3,8:11:1.99:208,0,2	1/1:2,20:22:34.10:596,34,0	1/1:4,9:13:12.03:133,12,0	1/1:3,6:9:12.03:133,12,0	1/1:5,10:15:34.49:360,34,0	1/1:0,12:12:30.08:332,30,0
chr10	29681954	.	TA	T	3420.03	PASS	AB=0.688;AC=39;AF=0.696;AN=56;BaseQRankSum=0.202;DP=479;FS=2.194;HRun=15;HaplotypeScore=55.7162;InbreedingCoeff=-0.1752;MQ=58.10;MQ0=4;MQRankSum=0.509;QD=7.50;ReadPosRankSum=1.793;VQSLOD=2.7024;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:14,12:29:50.35:129,0,50	0/1:3,4:7:17.49:30,0,17	0/0:10,0:4:8.84:0,9,65	0/0:13,0:6:1.22:0,1,19	0/1:5,4:11:9.02:67,0,9	1/1:8,13:21:32.25:199,32,0	0/1:6,9:16:2.29:100,0,2	0/1:11,16:27:27.97:206,0,28	1/1:4,5:10:10.90:64,11,0	0/1:4,9:14:15.24:155,0,15	0/1:9,9:18:25.85:81,0,26	0/1:8,6:15:12.54:50,0,13	0/1:11,1:12:6.49:75,0,6	0/1:6,2:8:13.05:40,0,13	1/1:8,8:16:21.74:198,22,0	1/1:8,16:24:11.93:204,12,0	1/1:9,11:20:2.50:128,3,0	0/1:16,9:25:29.38:142,0,29	1/1:12,4:18:19.77:133,20,0	0/1:14,15:30:26.98:196,0,27	1/1:4,2:6:7.66:51,8,0	1/1:4,10:15:31.33:197,31,0	1/1:4,10:16:21.57:126,22,0	1/1:10,12:21:43.31:271,43,0	1/1:7,8:17:3.60:128,4,0	1/1:11,10:21:12.20:195,12,0	0/1:9,5:14:39.35:78,0,39	1/1:5,12:18:28.95:179,29,0
chr10	29683577	.	T	TA	12566.17	PASS	AB=1.000;AC=54;AF=0.964;AN=56;BaseQRankSum=3.350;DP=421;FS=5.673;HRun=1;HaplotypeScore=368.3005;InbreedingCoeff=-0.0417;MQ=41.52;MQ0=0;MQRankSum=-1.805;QD=29.85;ReadPosRankSum=5.106;VQSLOD=2.9638;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,17:17:40.68:480,41,0	1/1:2,3:5:4.91:64,5,0	0/1:6,0:6:7.99:97,0,8	0/1:6,0:6:17.21:112,0,17	1/1:3,17:20:29.36:377,29,0	1/1:4,16:19:46.88:543,47,0	1/1:2,14:16:36.16:451,36,0	1/1:10,32:42:99:1449,106,0	1/1:0,13:13:30.06:397,30,0	1/1:4,14:18:43.50:595,43,0	1/1:0,8:8:21.02:255,21,0	1/1:2,17:19:46.96:580,47,0	1/1:4,22:24:60.14:799,60,0	1/1:1,10:11:33.02:409,33,0	1/1:2,13:15:38.94:424,39,0	1/1:1,18:17:45.15:636,45,0	1/1:1,5:6:18.03:232,18,0	1/1:2,4:6:15.05:213,15,0	1/1:4,7:11:28.72:333,29,0	1/1:0,17:17:36.08:486,36,0	1/1:0,10:10:15.72:227,16,0	1/1:1,5:6:15.05:212,15,0	1/1:2,11:13:23.64:285,24,0	1/1:1,10:11:22.23:268,22,0	1/1:0,16:16:33:403,33,0	1/1:0,27:26:78.26:1097,78,0	1/1:3,29:32:65.14:932,65,0	1/1:0,5:5:15.05:212,15,0
chr10	29683630	.	T	TG	18162.55	PASS	AB=0.813;AC=55;AF=0.982;AN=56;BaseQRankSum=0.791;DP=463;FS=0.000;HRun=1;HaplotypeScore=241.7116;InbreedingCoeff=-0.0254;MQ=65.83;MQ0=0;MQRankSum=-2.773;QD=39.23;ReadPosRankSum=3.515;VQSLOD=4.0964;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,14:16:32.98:471,33,0	1/1:0,3:3:9.03:143,9,0	1/1:11,6:17:23.13:439,23,0	0/1:10,3:13:24.15:161,0,24	1/1:0,20:20:45.83:759,46,0	1/1:0,30:30:78.27:1239,78,0	1/1:0,16:16:42.14:669,42,0	1/1:1,33:34:99:1548,99,0	1/1:1,19:20:57.19:896,57,0	1/1:1,17:18:51.17:791,51,0	1/1:0,3:3:9.03:143,9,0	1/1:3,25:28:78.26:1198,78,0	1/1:1,30:31:84.29:1324,84,0	1/1:1,12:13:36.12:562,36,0	1/1:0,19:19:54.18:860,54,0	1/1:1,31:32:65.99:1012,66,0	1/1:1,7:8:21.07:334,21,0	1/1:1,8:9:18.06:287,18,0	1/1:0,11:11:30.09:445,30,0	1/1:1,15:16:36.12:572,36,0	1/1:0,6:6:11.45:190,11,0	1/1:0,8:8:21.07:333,21,0	1/1:0,8:8:24.08:382,24,0	1/1:0,12:12:27.09:411,27,0	1/1:0,18:18:51.13:773,51,0	1/1:1,17:18:45.15:706,45,0	1/1:0,30:29:84.24:1336,84,0	1/1:1,5:6:12.04:178,12,0
chr10	29684168	.	G	GA	7578.01	PASS	AB=0.699;AC=48;AF=0.857;AN=56;BaseQRankSum=-4.625;DP=517;FS=0.000;HRun=11;HaplotypeScore=59.7173;InbreedingCoeff=0.0702;MQ=51.18;MQ0=6;MQRankSum=-0.128;QD=14.89;ReadPosRankSum=0.811;VQSLOD=5.0852;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,25:34:45.40:442,45,0	1/1:0,9:9:24.05:244,24,0	0/0:7,0:5:10.77:0,11,62	0/1:7,0:6:27.40:27,0,51	1/1:6,13:20:3.39:235,3,0	1/1:3,12:14:9.83:281,10,0	1/1:6,14:21:29.89:287,30,0	1/1:6,14:21:36.07:365,36,0	1/1:3,18:20:33.07:335,33,0	1/1:7,8:14:20.09:230,20,0	0/1:6,10:15:13.43:228,0,13	1/1:7,9:16:17.79:172,18,0	1/1:6,7:12:15.01:148,15,0	0/1:7,14:21:15.75:213,0,16	0/1:6,10:15:36.61:209,0,37	1/1:3,7:10:17.78:182,18,0	1/1:4,24:28:15.83:557,16,0	1/1:10,29:39:12.79:659,13,0	0/1:11,10:20:2.54:259,0,3	1/1:6,13:18:15.75:310,16,0	1/1:6,23:29:8.99:443,9,0	1/1:3,6:9:15.03:152,15,0	1/1:9,15:24:7.19:236,7,0	1/1:3,19:22:45.09:457,45,0	1/1:1,12:14:32.90:319,33,0	1/1:7,10:17:6.04:205,6,0	1/1:4,12:15:6.83:251,7,0	0/1:6,6:11:9.05:132,0,9
chr10	29686286	.	TTTTGTTTG	T	18572.87	PASS	AB=0.839;AC=49;AF=0.907;AN=54;BaseQRankSum=4.076;DP=676;FS=17.470;HRun=0;HaplotypeScore=175.9275;InbreedingCoeff=0.6530;MQ=58.74;MQ0=8;MQRankSum=-3.226;QD=31.06;ReadPosRankSum=4.462;VQSLOD=3.2870;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,13:25:23.99:441,24,0	1/1:5,8:13:21.07:531,21,0	0/0:39,0:26:25.28:0,25,439	0/0:21,0:15:12.04:0,12,365	1/1:7,31:38:78.02:1590,78,0	1/1:9,17:27:45.15:1099,45,0	1/1:6,8:14:12.04:265,12,0	1/1:26,8:33:21:291,21,0	1/1:5,0:17:27.09:503,27,0	1/1:11,16:27:48.15:1105,48,0	1/1:5,15:20:38.92:772,39,0	1/1:14,18:32:39.13:986,39,0	1/1:9,19:28:45.15:1137,45,0	1/1:3,13:16:33.11:834,33,0	1/1:13,20:33:45.15:1137,45,0	1/1:5,16:21:39.13:986,39,0	1/1:13,9:22:11.89:243,12,0	0/1:21,5:26:99:282,0,151	1/1:16,5:20:15.03:378,15,0	1/1:11,19:30:48.07:1024,48,0	./.	1/1:8,19:27:42.14:961,42,0	1/1:7,16:23:38.88:947,39,0	1/1:5,5:10:6.02:152,6,0	1/1:7,11:18:23.87:466,24,0	1/1:13,20:33:63.19:1456,63,0	1/1:20,13:33:36.12:910,36,0	1/1:7,3:10:3.48:76,3,0
chr10	29686653	.	T	TA	848.96	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-6.925;DP=689;FS=2.758;HRun=4;HaplotypeScore=68.7327;InbreedingCoeff=0.9992;MQ=85.03;MQ0=0;MQRankSum=-2.492;QD=31.44;ReadPosRankSum=2.168;VQSLOD=4.2960;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,99,1093	0/0:10,0:10:30.09:0,30,340	0/0:28,0:28:72.03:0,72,761	0/0:18,0:18:41.88:0,42,469	0/0:41,0:41:99:0,117,1326	0/0:22,0:22:59.76:0,60,656	0/0:16,0:16:48.14:0,48,544	0/0:31,0:30:84.24:0,84,953	1/1:1,26:27:69.23:944,69,0	0/0:23,0:23:66.17:0,66,734	0/0:28,0:28:81.23:0,81,918	0/0:31,0:31:87.19:0,87,963	0/0:19,0:19:54.15:0,54,612	0/0:29,0:29:84.22:0,84,941	0/0:23,0:23:69.18:0,69,773	0/0:29,0:29:87.25:0,87,987	0/0:35,0:35:99:0,99,1122	0/0:24,0:24:66.19:0,66,748	0/0:32,0:32:90.24:0,90,1009	0/0:22,0:22:60.14:0,60,663	0/0:18,0:18:48.14:0,48,544	0/0:22,0:22:63.17:0,63,706	0/0:22,0:22:60.17:0,60,680	0/0:19,0:19:51.15:0,51,579	0/0:25,0:25:75.19:0,75,839	0/0:24,0:24:60.16:0,60,671	0/0:24,0:24:69.20:0,69,781	0/0:11,0:11:33.09:0,33,374
chr10	29688334	.	TA	T	1031.59	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-1.453;DP=566;FS=14.790;HRun=9;HaplotypeScore=77.4792;InbreedingCoeff=0.9428;MQ=67.67;MQ0=1;MQRankSum=-1.481;QD=22.43;ReadPosRankSum=1.768;VQSLOD=3.2238;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:72.21:0,72,831	0/0:10,0:10:24.07:0,24,277	0/0:5,0:4:6.01:0,6,60	0/0:14,0:11:17.92:0,18,127	0/0:31,0:31:87.23:0,87,992	0/0:23,0:23:63.18:0,63,719	0/0:12,0:12:36.11:0,36,416	0/0:34,0:34:87.25:0,87,996	0/0:15,0:15:45.13:0,45,519	0/0:33,0:33:87.25:0,87,997	0/0:16,0:16:39.12:0,39,450	0/0:25,0:25:72.20:0,72,823	0/0:20,0:20:54.15:0,54,614	0/0:15,0:15:42.12:0,42,484	0/0:14,0:14:39.12:0,39,450	0/0:16,0:16:45.13:0,45,516	1/1:0,24:24:66.04:604,66,0	1/1:1,21:22:60.03:549,60,0	0/0:25,0:25:63.17:0,63,711	0/0:19,0:19:51.14:0,51,580	0/0:9,0:9:27.07:0,27,302	0/0:14,0:14:36.11:0,36,415	0/0:24,0:24:51.13:0,51,571	0/0:13,0:13:39.12:0,39,449	0/0:29,0:29:78.20:0,78,873	0/0:26,0:26:69.17:0,69,770	0/0:33,0:33:87.26:0,87,1004	0/0:17,0:17:48.14:0,48,553
chr10	29688479	.	ATGTGTTCC	A	3614.61	PASS	AC=6;AF=0.111;AN=54;BaseQRankSum=10.093;DP=592;FS=22.779;HRun=0;HaplotypeScore=168.3051;InbreedingCoeff=0.9960;MQ=85.94;MQ0=0;MQRankSum=-10.252;QD=40.16;ReadPosRankSum=1.079;VQSLOD=1.7191;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,30:37:51.18:1368,51,0	0/0:7,0:7:21.07:0,21,889	0/0:30,0:29:58.49:0,58,2458	0/0:25,0:25:25.94:0,26,2022	0/0:20,0:20:51.17:0,51,2039	0/0:23,0:23:63.22:0,63,2547	0/0:24,0:24:69.24:0,69,2870	0/0:31,0:31:72.24:0,72,2628	0/0:17,0:17:51.17:0,51,2051	0/0:14,0:14:36.12:0,36,1554	0/0:8,0:8:21.07:0,21,834	0/0:26,0:26:78.27:0,78,3299	0/0:23,0:23:66.21:0,66,2236	0/0:23,0:23:60.21:0,60,2278	0/0:21,0:21:63.22:0,63,2542	0/0:16,0:16:45.14:0,45,1680	1/1:3,26:29:42.14:1146,42,0	1/1:6,18:24:42.14:1100,42,0	0/0:26,0:26:69.24:0,69,2715	0/0:11,0:11:27.09:0,27,1169	0/0:34,0:34:99:0,102,4126	0/0:13,0:13:39.13:0,39,1438	0/0:11,0:11:30.10:0,30,1214	0/0:30,0:30:87.30:0,87,3598	0/0:26,0:26:69.24:0,69,2908	0/0:19,0:19:54.19:0,54,2254	0/0:24,0:24:51.16:0,51,1988	./.
chr10	29688666	.	CT	C	5598.63	PASS	AB=0.811;AC=50;AF=0.893;AN=56;BaseQRankSum=-3.081;DP=466;FS=0.730;HRun=8;HaplotypeScore=71.0669;InbreedingCoeff=0.2472;MQ=72.58;MQ0=8;MQRankSum=-0.581;QD=12.47;ReadPosRankSum=4.892;VQSLOD=4.0808;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,20:26:36.05:347,36,0	0/1:1,6:7:9.03:66,0,9	0/1:35,0:17:17.66:18,0,103	0/1:28,0:16:10.14:10,0,121	1/1:2,11:13:20.92:184,21,0	1/1:3,12:15:35.99:337,36,0	1/1:2,11:13:30.04:289,30,0	1/1:8,10:18:26.88:227,27,0	0/0:17,0:17:39:0,39,403	1/1:7,14:21:38.96:350,39,0	1/1:2,9:11:14.92:133,15,0	1/1:2,18:20:45.01:423,45,0	1/1:3,11:14:21.03:202,21,0	1/1:2,7:9:9.01:87,9,0	1/1:5,9:14:18.02:173,18,0	1/1:2,6:8:5.88:82,6,0	1/1:7,21:28:36.05:346,36,0	1/1:7,24:29:33.16:382,33,0	1/1:4,8:12:23.99:219,24,0	1/1:2,11:13:26.78:215,27,0	0/1:11,6:16:15.87:126,0,16	1/1:3,10:13:23.96:220,24,0	1/1:2,12:14:11.71:115,12,0	1/1:2,12:13:18.03:173,18,0	1/1:2,19:20:36.06:347,36,0	1/1:2,14:16:32.56:297,33,0	1/1:3,10:13:15.02:145,15,0	1/1:0,3:3:9.01:87,9,0
chr10	29688673	.	TTG	T	292.89	PASS	AB=0.958;AC=14;AF=0.250;AN=56;BaseQRankSum=-3.301;DP=500;FS=5.353;HRun=0;HaplotypeScore=94.5144;InbreedingCoeff=-0.3562;MQ=76.17;MQ0=13;MQRankSum=2.098;QD=1.25;ReadPosRankSum=-3.734;VQSLOD=0.2039;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:24.59:0,25,89	0/1:8,0:8:12.61:13,0,42	0/0:54,0:25:46.95:0,47,397	0/0:40,0:19:12.05:0,12,249	0/1:16,0:16:21.35:21,0,36	0/1:17,1:18:15.40:15,0,73	0/0:11,0:11:15.55:0,16,41	0/1:14,1:15:51.51:52,0,79	0/0:18,0:18:47.96:0,48,687	0/1:21,0:21:47.97:48,0,150	0/1:11,0:11:30.87:31,0,36	0/1:23,1:24:10.43:10,0,86	0/0:14,0:14:11.55:0,12,44	0/0:10,0:10:1.66:0,2,24	0/0:10,0:10:12.34:0,12,58	0/0:7,0:7:9.44:0,9,42	0/0:26,0:26:19.99:0,20,71	0/1:28,1:27:17.84:18,0,55	0/1:12,0:11:24.07:24,0,56	0/1:12,0:12:14.41:58,0,14	0/1:10,7:16:55.60:74,0,56	0/1:13,1:14:27.21:27,0,31	0/1:16,0:16:20.10:20,0,66	0/0:14,0:12:9.33:0,9,25	0/0:22,0:21:18.66:0,19,50	0/1:21,1:21:32.21:32,0,93	0/0:10,0:10:7.77:0,8,21	0/0:6,0:5:6.70:0,7,18
chr10	29690541	.	G	GTGGACCATAACCC	91337.12	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-6.385;DP=748;FS=7.793;HRun=0;HaplotypeScore=222.1590;InbreedingCoeff=0.9950;MQ=55.28;MQ0=1;MQRankSum=-8.341;QD=128.83;ReadPosRankSum=4.195;VQSLOD=3.8853;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:16,6:25:22.99:2294,23,0	1/1:7,4:11:30.07:1602,30,0	0/0:22,0:21:45.15:0,45,1476	0/0:17,0:17:36.12:0,36,1214	1/1:15,18:34:66.23:3941,66,0	1/1:13,11:27:63.17:3714,63,0	1/1:23,4:29:66.19:3243,66,0	1/1:35,0:35:87.28:4367,87,0	1/1:13,7:22:42.14:2381,42,0	1/1:12,20:35:99:5690,99,0	1/1:12,12:26:60.21:3518,60,0	1/1:22,17:43:93.32:5575,93,0	1/1:12,20:35:87.30:5418,87,0	1/1:13,11:28:63.22:3551,63,0	1/1:17,18:37:90.27:5544,90,0	1/1:17,17:37:84.18:5173,84,0	1/1:10,3:13:27.09:1486,27,0	1/1:8,4:15:21.07:1269,21,0	1/1:9,2:11:27.08:1374,27,0	1/1:10,11:23:60.21:3362,60,0	1/1:19,2:22:36.10:1810,36,0	1/1:18,13:32:78.18:4251,78,0	1/1:4,17:25:57.20:3436,57,0	1/1:12,7:20:36.12:2115,36,0	1/1:17,13:35:65.75:3631,66,0	1/1:18,20:38:99:6028,99,0	1/1:18,13:33:78.22:4329,78,0	1/1:11,5:16:39.10:2236,39,0
chr10	29692084	.	CGT	C	6516.17	PASS	AB=0.851;AC=46;AF=0.821;AN=56;BaseQRankSum=-0.655;DP=628;FS=5.437;HRun=0;HaplotypeScore=120.4203;InbreedingCoeff=0.3476;MQ=62.58;MQ0=7;MQRankSum=4.418;QD=11.68;ReadPosRankSum=1.453;VQSLOD=4.1607;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,19:33:11.15:295,11,0	1/1:6,2:9:11.23:91,11,0	0/0:22,0:13:6.02:0,6,84	0/0:27,0:21:6.01:0,6,67	1/1:2,10:12:15.04:172,15,0	1/1:9,18:28:33.09:379,33,0	1/1:7,15:22:30.08:345,30,0	1/1:14,13:28:32.17:324,32,0	0/1:24,0:23:37.56:38,0,146	1/1:8,6:14:23.68:229,24,0	1/1:8,12:20:8.10:163,8,0	1/1:7,22:30:34.67:419,35,0	1/1:6,10:17:17.88:187,18,0	1/1:6,17:22:30.09:345,30,0	1/1:14,20:36:38.78:407,39,0	0/1:10,17:29:9.05:303,0,9	0/1:17,0:17:4.84:46,0,5	0/0:21,0:21:2.01:0,2,92	1/1:19,9:27:24.05:259,24,0	1/1:7,7:14:6.60:161,7,0	1/1:12,34:46:63.18:723,63,0	1/1:3,4:8:5.99:69,6,0	1/1:6,3:9:3.01:34,3,0	1/1:7,25:32:36.09:405,36,0	1/1:7,21:30:38.78:407,39,0	1/1:5,8:15:29.18:290,29,0	1/1:4,21:25:29.65:339,30,0	0/1:6,2:7:4.18:87,0,4
chr10	29692092	.	TGTGTGTGTGTGTGTGTGTGTGA	T	1335.26	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-0.052;DP=641;FS=14.514;HRun=0;HaplotypeScore=332.8918;InbreedingCoeff=0.6849;MQ=57.66;MQ0=9;MQRankSum=-2.288;QD=58.05;ReadPosRankSum=1.806;VQSLOD=1.7104;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:52.25:0,52,2910	0/0:9,0:9:18.06:0,18,1027	0/0:21,0:10:14.89:0,15,287	0/0:25,0:16:2.18:0,2,108	0/0:14,0:14:21.06:0,21,1226	0/0:28,0:28:42.11:0,42,2639	0/0:23,0:23:39.09:0,39,2590	0/0:26,0:26:66.86:0,67,1850	1/1:16,7:22:41.78:1430,42,0	0/0:17,0:17:42.01:0,42,1925	0/0:19,0:19:24.07:0,24,1477	0/0:31,0:30:52.05:0,52,3412	0/0:16,0:16:18.06:0,18,1331	0/0:23,0:22:38.95:0,39,2587	0/0:36,0:36:42.14:0,42,3037	0/0:29,0:29:54.11:0,54,3199	0/0:19,0:19:21.05:0,21,465	0/0:23,0:23:29.84:0,30,593	0/0:23,0:22:33.09:0,33,1841	0/0:13,0:13:21.06:0,21,1331	0/0:50,0:50:87.16:0,87,5580	0/0:8,0:8:6.02:0,6,455	0/0:8,0:8:6.49:0,6,373	0/0:32,0:32:39.13:0,39,2860	0/0:32,0:32:51.16:0,51,3383	0/0:20,0:20:51.18:0,51,3344	0/0:27,0:27:40.01:0,40,2576	0/0:11,0:10:30.08:0,30,1393
chr10	29692104	.	TGTGTGTGTGA	T	856.53	PASS	AB=0.878;AC=5;AF=0.089;AN=56;BaseQRankSum=0.900;DP=665;FS=9.812;HRun=0;HaplotypeScore=229.2303;InbreedingCoeff=0.3823;MQ=57.37;MQ0=12;MQRankSum=-4.594;QD=8.92;ReadPosRankSum=0.284;VQSLOD=1.1194;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:62.26:0,62,1286	0/0:7,0:7:14.89:0,15,335	0/0:31,0:14:29.79:0,30,230	0/0:29,0:12:14.11:0,14,107	0/0:14,0:14:20.54:0,21,433	0/0:27,0:27:45.08:0,45,1058	0/0:22,0:22:42.12:0,42,1019	0/1:26,0:26:1.70:2,0,465	0/1:27,0:26:9.65:398,0,10	0/0:19,0:19:18.94:0,19,746	0/0:19,0:19:27.02:0,27,557	0/0:32,0:31:42.31:0,42,1332	0/0:18,0:18:36.04:0,36,644	0/0:24,0:23:44.71:0,45,1051	0/0:30,0:30:45.14:0,45,1190	0/0:29,0:29:54.11:0,54,1237	1/1:5,19:24:13.29:414,13,0	0/1:8,11:19:26.35:155,0,26	0/0:16,0:15:29.73:0,30,653	0/0:11,0:11:21.06:0,21,517	0/0:53,0:53:98.41:0,98,2180	0/0:9,0:9:15.02:0,15,283	0/0:6,0:6:12.01:0,12,191	0/0:34,0:34:51.12:0,51,1207	0/0:32,0:32:51.62:0,52,1237	0/0:20,0:20:57.18:0,57,1239	0/0:28,0:28:52.38:0,52,1114	0/0:15,0:13:35.78:0,36,605
chr10	29697291	.	GAA	G	4213.47	PASS	AB=0.594;AC=29;AF=0.518;AN=56;BaseQRankSum=-8.616;DP=604;FS=0.000;HRun=15;HaplotypeScore=94.9556;InbreedingCoeff=0.5881;MQ=68.51;MQ0=1;MQRankSum=-2.020;QD=10.94;ReadPosRankSum=3.763;VQSLOD=3.9147;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:5,1:26:1.70:2,0,118	0/0:2,1:15:7.03:0,7,109	0/0:25,0:19:19.28:0,19,196	0/0:16,1:15:0.42:0,0,13	0/0:5,0:12:12.05:0,12,90	1/1:7,15:23:9.47:262,9,0	1/1:5,21:26:56.94:502,57,0	0/1:15,6:46:72.48:72,0,262	0/0:13,0:13:10.85:0,11,138	0/0:14,1:29:18.82:0,19,196	0/0:6,1:18:29.87:0,30,164	1/1:4,13:18:29.72:249,30,0	1/1:3,23:27:50.60:435,51,0	0/1:7,10:19:3.38:159,0,3	0/0:7,1:25:16.45:0,16,177	1/1:2,14:18:11.02:296,11,0	0/0:4,0:17:32.95:0,33,144	0/0:2,1:25:35.06:0,35,231	0/1:7,2:18:11.33:11,0,195	0/0:5,1:22:1.46:0,1,129	0/1:5,3:22:39.34:39,0,95	1/1:5,10:15:25.96:236,26,0	1/1:4,15:20:35.71:361,36,0	1/1:7,19:27:44.59:382,45,0	1/1:6,13:23:28.97:323,29,0	1/1:7,17:27:50.17:459,50,0	1/1:4,21:25:20.84:346,21,0	1/1:1,3:4:8.98:79,9,0
chr10	29697305	.	AAC	A	620.49	PASS	AB=0.993;AC=15;AF=0.268;AN=56;BaseQRankSum=12.004;DP=623;FS=2.939;HRun=0;HaplotypeScore=107.4193;InbreedingCoeff=-0.0220;MQ=68.88;MQ0=1;MQRankSum=-0.167;QD=2.26;ReadPosRankSum=8.802;VQSLOD=0.8489;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:74.91:0,75,463	0/0:16,0:16:36.71:0,37,245	0/0:23,0:16:44.62:0,45,431	0/0:10,0:8:7.81:0,8,71	0/0:13,0:13:25.48:0,25,191	0/1:21,0:21:38.19:38,0,101	0/1:25,0:25:49.56:56,0,50	0/0:47,0:47:60.43:0,60,698	1/1:15,2:17:32.10:277,32,0	0/0:27,1:28:61.73:0,62,459	0/0:17,0:17:34.63:0,35,224	0/1:22,1:23:35.57:36,0,139	0/1:29,0:29:65.72:66,0,66	0/0:20,0:20:2.02:0,2,167	0/0:24,0:24:47.30:0,47,347	0/1:20,0:20:18.04:18,0,90	0/0:18,0:18:50.25:0,50,358	0/0:33,0:33:87.67:0,88,622	0/0:18,0:18:38.89:0,39,379	0/0:25,0:25:58.18:0,58,405	0/0:26,0:26:47.89:0,48,421	0/1:11,0:11:4.73:24,0,5	1/1:16,0:16:1.83:71,2,0	0/1:27,0:27:24.05:24,0,112	0/1:26,0:25:30.68:31,0,148	0/1:25,1:26:67.57:68,0,95	0/1:26,0:24:56.16:70,0,56	0/1:7,0:7:0.13:0,0,55
chr10	29698047	.	G	GA	3394.95	PASS	AB=0.802;AC=50;AF=0.893;AN=56;BaseQRankSum=-2.102;DP=470;FS=4.963;HRun=7;HaplotypeScore=128.5207;InbreedingCoeff=0.2255;MQ=41.33;MQ0=63;MQRankSum=-1.557;QD=7.91;ReadPosRankSum=-0.310;VQSLOD=0.7840;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:9,7:14:20.31:184,20,0	1/1:5,4:6:5.69:47,6,0	0/0:41,0:6:13.98:0,14,104	0/1:32,1:4:0:0,0,0	1/1:14,9:23:13.74:122,14,0	1/1:7,10:17:31.70:323,32,0	1/1:9,3:11:6.01:61,6,0	1/1:13,8:19:32.61:343,33,0	0/1:9,5:10:5.65:36,0,6	1/1:12,9:17:24.06:281,24,0	1/1:10,4:14:9:87,9,0	1/1:8,6:13:11.47:114,11,0	1/1:10,9:16:23.35:219,23,0	1/1:13,6:13:19.70:152,20,0	1/1:13,4:15:12.07:80,12,0	1/1:12,3:13:8.31:75,8,0	1/1:15,3:16:17.50:111,17,0	1/1:6,4:6:6.02:72,6,0	0/1:10,10:17:21.81:317,0,22	1/1:6,5:11:8.98:104,9,0	1/1:1,1:1:3.01:36,3,0	1/1:9,5:12:13.24:110,13,0	1/1:6,5:7:5.87:51,6,0	0/1:8,2:7:14.07:14,0,15	1/1:12,7:16:8.49:67,8,0	1/1:12,6:14:21.06:251,21,0	1/1:15,6:15:14.38:77,14,0	1/1:8,3:8:4.28:60,4,0
chr10	29698057	.	ACCC	A	6278.02	PASS	AB=0.840;AC=50;AF=0.926;AN=54;BaseQRankSum=-2.068;DP=466;FS=2.502;HRun=5;HaplotypeScore=90.9491;InbreedingCoeff=0.3044;MQ=52.82;MQ0=61;MQRankSum=-0.843;QD=15.70;ReadPosRankSum=1.630;VQSLOD=0.8864;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,5:15:33.04:415,33,0	1/1:5,2:5:6.01:65,6,0	0/0:63,0:15:14.12:0,14,329	0/1:41,0:8:15.99:16,0,61	1/1:8,7:20:33.07:425,33,0	1/1:5,9:15:29.47:384,29,0	1/1:4,2:8:5.50:43,6,0	1/1:5,9:18:38.59:512,39,0	1/1:3,5:8:18.02:221,18,0	1/1:8,5:12:23.86:325,24,0	1/1:14,2:18:30.83:365,31,0	1/1:8,2:11:14.14:90,14,0	1/1:7,7:14:20.53:271,21,0	1/1:10,5:12:27.44:293,27,0	1/1:7,5:11:21.26:177,21,0	1/1:12,2:12:21.51:136,22,0	1/1:8,6:14:29.99:333,30,0	1/1:4,5:8:17.94:213,18,0	0/1:9,6:14:99:323,0,102	1/1:3,4:9:18.06:256,18,0	./.	1/1:8,3:11:17.98:212,18,0	1/1:6,1:4:3.01:38,3,0	1/1:7,2:6:5.71:66,6,0	1/1:8,5:15:33.06:396,33,0	1/1:10,6:14:29.85:384,30,0	1/1:10,6:14:19.64:258,20,0	1/1:6,3:7:5.99:63,6,0
chr10	29698151	.	T	TA	12639.12	PASS	AB=1.000;AC=53;AF=0.946;AN=56;BaseQRankSum=-5.223;DP=395;FS=1.175;HRun=5;HaplotypeScore=40.2943;InbreedingCoeff=0.5507;MQ=76.42;MQ0=0;MQRankSum=-4.790;QD=33.17;ReadPosRankSum=3.695;VQSLOD=4.9305;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,20:22:57.19:749,57,0	1/1:0,5:5:15.05:197,15,0	0/0:13,0:12:20.74:0,21,155	0/1:9,0:9:25.85:26,0,36	1/1:1,13:14:33.11:434,33,0	1/1:0,21:21:57.19:750,57,0	1/1:1,10:11:27.09:355,27,0	1/1:4,25:29:75.20:941,75,0	1/1:0,11:11:27.09:355,27,0	1/1:1,17:18:51.14:655,51,0	1/1:0,14:14:30.10:395,30,0	1/1:1,13:14:30.10:393,30,0	1/1:1,17:18:48.16:629,48,0	1/1:0,5:5:15.05:197,15,0	1/1:0,11:11:30.10:390,30,0	1/1:1,10:11:27.09:355,27,0	1/1:1,24:25:75.23:972,75,0	1/1:1,17:18:48.16:632,48,0	1/1:1,16:17:48.13:603,48,0	1/1:2,16:18:48.11:612,48,0	1/1:0,4:4:12.04:158,12,0	1/1:0,3:3:9.03:118,9,0	1/1:0,8:8:24.08:316,24,0	1/1:0,2:2:6.02:79,6,0	1/1:2,17:19:48.16:632,48,0	1/1:0,12:12:33.11:434,33,0	1/1:2,16:18:42.14:553,42,0	1/1:1,23:24:54.18:710,54,0
chr10	29698420	.	T	TCCTCCCTC	3818.05	PASS	AB=0.882;AC=45;AF=0.865;AN=52;BaseQRankSum=-2.526;DP=243;FS=5.027;HRun=0;HaplotypeScore=69.2387;InbreedingCoeff=0.0778;MQ=84.12;MQ0=1;MQRankSum=1.368;QD=17.59;ReadPosRankSum=1.885;VQSLOD=1.8223;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:4,6:12:9.50:307,10,0	0/1:3,0:3:0:0,0,0	0/0:21,0:16:3.01:0,3,37	0/1:18,0:14:0.72:15,0,1	1/1:3,1:4:3.01:124,3,0	1/1:10,0:10:15.01:229,15,0	1/1:11,0:11:6.21:114,6,0	1/1:11,0:11:3.01:113,3,0	1/1:3,0:3:3.48:41,3,0	1/1:4,2:7:9.92:259,10,0	./.	1/1:10,8:19:11.98:292,12,0	1/1:7,1:8:14.88:308,15,0	1/1:4,2:7:6.49:243,6,0	1/1:6,3:9:3.99:128,4,0	1/1:9,0:9:6:66,6,0	1/1:6,4:11:3.01:125,3,0	0/1:3,0:3:18.05:46,0,18	1/1:4,0:4:3.01:89,3,0	./.	0/1:13,4:18:38.63:172,0,39	1/1:4,0:4:3.01:53,3,0	1/1:5,2:7:3.01:123,3,0	0/1:2,2:5:0:0,0,0	1/1:5,2:7:6.02:250,6,0	1/1:9,0:10:12.91:242,13,0	1/1:2,5:7:6.02:245,6,0	1/1:6,3:9:6.02:235,6,0
chr10	29698441	.	CTCCA	C	612.05	PASS	AB=0.907;AC=14;AF=0.250;AN=56;BaseQRankSum=0.381;DP=201;FS=20.346;HRun=0;HaplotypeScore=52.0905;InbreedingCoeff=-0.1897;MQ=64.24;MQ0=1;MQRankSum=-4.543;QD=6.18;ReadPosRankSum=-2.188;VQSLOD=-0.1508;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:12,1:13:22.68:23,0,590	0/0:4,0:4:3.01:0,3,75	0/0:22,0:14:26.47:0,26,587	0/0:14,0:13:24.07:0,24,431	0/0:7,0:7:21.07:0,21,490	0/1:8,2:10:99:138,0,243	0/1:8,1:9:37.40:37,0,362	0/0:7,0:7:10.31:0,10,297	0/1:3,0:3:6.78:34,0,7	0/0:5,0:5:11.05:0,11,272	0/0:4,0:3:0:0,0,0	0/1:11,0:11:32.64:33,0,277	0/1:9,1:9:94.62:95,0,264	0/1:6,0:6:24.31:24,0,341	0/0:5,0:5:7.06:0,7,177	0/1:5,0:5:51.19:51,0,172	0/0:7,0:7:6.30:0,6,153	0/1:4,0:4:7.80:8,0,128	0/0:5,0:5:15.04:0,15,351	0/0:2,0:2:6.01:0,6,112	0/1:12,1:13:31.77:32,0,425	0/1:3,2:5:41.22:41,0,213	0/0:5,0:5:11.11:0,11,237	0/0:4,0:4:6.02:0,6,146	0/0:2,1:3:6.02:0,6,92	0/1:4,4:8:99:178,0,134	0/0:7,0:7:18.06:0,18,425	1/1:2,0:2:6.02:68,6,0
chr10	29698952	.	GT	G	645.18	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.831;DP=646;FS=0.895;HRun=2;HaplotypeScore=61.3823;InbreedingCoeff=0.9998;MQ=91.82;MQ0=0;MQRankSum=-3.225;QD=32.26;ReadPosRankSum=2.100;VQSLOD=3.5039;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:84.27:0,84,1236	0/0:12,0:12:36.12:0,36,523	0/0:31,0:31:87.28:0,87,1284	0/0:22,0:22:60.17:0,60,816	0/0:24,0:24:72.22:0,72,1039	0/0:23,0:22:69.23:0,69,1028	0/0:27,0:27:81.26:0,81,1193	0/0:24,0:24:69.23:0,69,1030	1/1:0,20:20:57.19:740,57,0	0/0:19,0:19:54.17:0,54,760	0/0:22,0:22:63.21:0,63,944	0/0:19,0:19:57.19:0,57,853	0/0:18,0:18:51.16:0,51,743	0/0:14,0:14:42.13:0,42,610	0/0:29,0:29:84.24:0,84,1233	0/0:25,0:25:75.22:0,75,1083	0/0:27,0:27:81.19:0,81,1141	0/0:19,0:19:57.19:0,57,854	0/0:18,0:18:54.18:0,54,810	0/0:29,0:29:87.28:0,87,1284	0/0:28,0:28:84.28:0,84,1259	0/0:24,0:24:72.24:0,72,1079	0/0:27,0:27:75.24:0,75,1103	0/0:24,0:24:72.24:0,72,1079	0/0:30,0:30:87.29:0,87,1294	0/0:18,0:18:54.17:0,54,785	0/0:23,0:22:69.20:0,69,993	0/0:22,0:22:60.20:0,60,896
chr10	29699976	.	A	AACACACAC	6985.31	PASS	AB=0.667;AC=51;AF=0.981;AN=52;BaseQRankSum=-1.630;DP=523;FS=0.000;HRun=0;HaplotypeScore=153.0805;InbreedingCoeff=0.0416;MQ=60.85;MQ0=9;MQRankSum=0.227;QD=14.83;ReadPosRankSum=0.291;VQSLOD=3.4051;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:25:9.50:282,10,0	1/1:2,0:4:6.02:204,6,0	1/1:35,0:7:1.25:3,1,0	./.	1/1:12,0:12:6.02:174,6,0	1/1:8,0:18:3.48:66,3,0	1/1:29,0:33:24.91:403,25,0	1/1:26,0:26:15.52:399,16,0	0/1:8,0:16:0.83:91,0,1	1/1:13,0:15:23.98:380,24,0	1/1:10,0:13:15.52:399,16,0	1/1:10,8:21:14.69:455,15,0	1/1:8,3:11:3.01:85,3,0	1/1:4,2:11:3.01:122,3,0	1/1:10,1:16:12.02:366,12,0	1/1:6,8:18:12.02:352,12,0	1/1:23,0:21:9.42:145,9,0	1/1:13,0:13:8.99:167,9,0	1/1:5,0:7:9.02:194,9,0	./.	1/1:20,0:34:6:147,6,0	1/1:9,0:10:9.02:208,9,0	1/1:10,0:13:6.02:165,6,0	1/1:26,2:31:32.56:653,33,0	1/1:16,0:16:6.48:68,6,0	1/1:16,0:17:27.47:551,27,0	1/1:11,0:25:25.88:590,26,0	1/1:8,0:8:12.88:317,13,0
chr10	29703233	.	AT	A	130.72	PASS	AB=0.735;AC=2;AF=0.036;AN=56;BaseQRankSum=3.882;DP=549;FS=0.000;HRun=10;HaplotypeScore=72.7811;InbreedingCoeff=0.2512;MQ=70.07;MQ0=9;MQRankSum=0.394;QD=4.08;ReadPosRankSum=1.269;VQSLOD=0.2164;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:60.11:0,60,634	0/0:11,0:11:33.08:0,33,357	0/0:27,1:15:30:0,30,296	0/0:25,1:18:16.05:0,16,393	0/0:23,0:23:57.15:0,57,630	0/0:27,1:28:29:0,29,514	0/0:17,0:17:38.68:0,39,400	0/0:25,0:25:45.11:0,45,491	0/1:3,10:13:3.19:204,0,3	0/0:21,0:21:54.14:0,54,591	0/0:13,0:13:33.07:0,33,350	0/0:19,0:19:39.09:0,39,423	0/0:22,0:22:45.10:0,45,488	0/0:13,0:13:36.04:0,36,381	0/0:17,1:18:28.01:0,28,511	0/1:17,2:19:7.01:7,0,368	0/0:18,0:17:42.08:0,42,452	0/0:26,0:26:68.10:0,68,727	0/0:16,0:16:42.08:0,42,446	0/0:14,0:14:39.11:0,39,431	0/0:19,0:19:42.11:0,42,462	0/0:16,0:17:32.92:0,33,346	0/0:17,0:17:39.09:0,39,421	0/0:29,0:29:62.29:0,62,661	0/0:21,0:21:54.61:0,55,590	0/0:18,0:18:51.13:0,51,556	0/0:22,0:22:60.11:0,60,635	0/0:9,0:8:8.99:0,9,87
chr10	29703250	.	TTGTG	T	2115.22	PASS	AB=0.817;AC=34;AF=0.680;AN=50;BaseQRankSum=-1.770;DP=581;FS=1.882;HRun=0;HaplotypeScore=104.9171;InbreedingCoeff=0.4417;MQ=59.51;MQ0=35;MQRankSum=-0.745;QD=5.55;ReadPosRankSum=-0.584;VQSLOD=2.1838;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:29:24.06:0,24,388	0/0:8,0:9:2.74:0,3,12	./.	./.	1/1:14,5:18:9:113,9,0	1/1:16,8:24:12.04:184,12,0	1/1:21,1:22:8.89:135,9,0	0/0:28,0:27:2.29:0,2,6	0/1:11,0:13:2.76:3,0,14	0/0:18,0:16:3.01:0,3,70	0/0:16,0:16:14.47:0,14,275	1/1:20,7:26:9.03:137,9,0	1/1:13,1:18:6.02:89,6,0	1/1:15,3:17:14.81:223,15,0	1/1:15,1:16:4.83:51,5,0	1/1:17,3:20:11.54:223,12,0	0/0:15,0:18:5.49:0,5,24	0/1:22,1:23:31.66:32,0,43	./.	1/1:14,4:17:9.03:137,9,0	1/1:21,0:18:3.01:37,3,0	1/1:12,1:11:9.01:97,9,0	1/1:16,0:16:12.04:182,12,0	0/1:26,4:30:1.52:212,0,2	1/1:17,3:20:3.01:46,3,0	1/1:20,7:25:8.99:138,9,0	1/1:21,1:23:11.96:122,12,0	0/1:4,4:9:0.30:108,0,0
chr10	29703449	.	G	GC	787.76	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=-4.180;DP=635;FS=18.731;HRun=7;HaplotypeScore=111.7909;InbreedingCoeff=0.6446;MQ=78.69;MQ0=0;MQRankSum=-2.755;QD=12.50;ReadPosRankSum=-0.260;VQSLOD=1.4928;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,32:40:26.38:879,26,0	0/0:10,0:9:27.04:0,27,260	0/0:15,0:15:17.90:0,18,248	0/1:22,0:22:10.09:10,0,259	0/0:24,0:24:60.08:0,60,572	0/0:19,0:19:48.07:0,48,462	0/0:38,0:38:99:0,102,973	0/0:22,0:22:35.91:0,36,316	0/0:16,0:16:39.06:0,39,376	0/0:26,0:26:63.03:0,63,591	0/0:10,0:10:27.03:0,27,258	0/0:31,0:31:62.66:0,63,601	0/0:22,0:22:63.02:0,63,595	0/0:24,0:23:60.01:0,60,560	0/0:23,0:23:54.04:0,54,513	0/0:24,0:24:60.08:0,60,573	0/0:30,0:30:87.08:0,87,819	0/0:26,0:26:63.07:0,63,600	0/0:15,0:15:41.08:0,41,377	0/0:13,0:13:30.03:0,30,284	0/0:70,0:70:99:0,186,1718	0/0:18,0:18:51.07:0,51,486	0/0:9,0:9:18.02:0,18,173	0/0:27,0:27:66.07:0,66,625	0/0:11,0:11:27.04:0,27,259	0/0:17,0:17:39.06:0,39,376	0/0:24,0:24:69.04:0,69,655	0/0:8,0:8:12.01:0,12,116
chr10	29705304	.	TCAGACAGCA	T	133.57	PASS	AB=0.890;AC=6;AF=0.107;AN=56;BaseQRankSum=7.800;DP=1479;FS=26.742;HRun=0;HaplotypeScore=448.2190;InbreedingCoeff=-0.1195;MQ=49.06;MQ0=22;MQRankSum=-5.967;QD=0.55;ReadPosRankSum=-2.546;VQSLOD=0.2374;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:29,1:27:99:117,0,131	0/0:23,0:18:44.77:0,45,1436	0/0:43,0:30:65.73:0,66,2374	0/0:52,0:36:86.29:0,86,2742	0/0:34,1:34:47.50:0,48,1734	0/0:26,2:27:21.26:0,21,1638	0/0:58,1:56:99:0,107,5356	0/0:39,0:38:99:0,108,4304	0/1:19,11:21:51.17:51,0,145	0/0:58,3:57:59.40:0,59,5899	0/0:37,1:37:54.18:0,54,2027	0/0:89,6:84:99:0,138,5003	0/0:71,5:66:99:0,100,5094	0/0:72,2:68:92.89:0,93,3712	0/1:80,2:76:21.58:22,0,3963	0/0:66,6:63:99:0,105,5040	0/1:33,8:29:22.89:23,0,2827	0/0:34,1:31:64.64:0,65,3447	0/1:24,1:23:26.76:27,0,2081	0/0:45,0:40:72.28:0,72,3293	0/0:151,7:141:99:0,331,14266	0/0:56,0:50:99:0,102,4477	0/0:32,0:31:56.77:0,57,2337	0/0:77,6:69:99:0,149,6439	0/0:44,2:40:75.83:0,76,2838	0/0:57,3:56:99:0,157,6104	0/1:28,5:31:17.86:18,0,2601	0/0:28,0:26:69.02:0,69,2803
chr10	29705367	.	ACACTCACACAGGCACACACAGG	A	1514.76	PASS	AB=0.989;AC=17;AF=0.304;AN=56;BaseQRankSum=3.256;DP=1146;FS=1.340;HRun=0;HaplotypeScore=455.5745;InbreedingCoeff=-0.3301;MQ=37.60;MQ0=116;MQRankSum=-7.536;QD=2.37;ReadPosRankSum=-2.395;VQSLOD=0.4007;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:24,1:19:24.83:40,0,25	0/1:15,0:13:46.36:46,0,163	0/0:26,0:11:18.09:0,18,534	0/0:24,0:10:9.36:0,9,216	0/1:34,0:25:27.70:28,0,169	0/1:21,0:19:99:144,0,209	0/0:54,0:47:35.76:0,36,716	0/0:43,0:24:31.66:0,32,737	1/1:22,0:12:2.53:23,3,0	0/1:74,0:53:99:108,0,1125	0/0:26,0:22:12.97:0,13,215	0/1:67,1:52:99:104,0,723	0/1:57,2:45:99:176,0,1122	0/1:44,0:33:84.21:84,0,162	0/0:71,0:60:29.32:0,29,821	0/1:61,0:51:99:371,0,285	0/0:30,0:18:14.20:0,14,186	0/0:16,0:14:10.99:0,11,155	0/0:27,0:7:15.04:0,15,291	0/1:37,0:31:99:103,0,379	0/0:126,0:88:68.67:0,69,1286	0/1:45,0:30:60.87:61,0,324	0/1:28,1:21:10.59:11,0,478	0/0:47,0:33:31.15:0,31,606	0/1:37,0:29:55.73:56,0,264	0/1:50,0:38:99:168,0,529	0/1:18,1:16:99:150,0,155	0/0:16,0:14:6.01:0,6,90
chr10	29705403	.	A	ACT	3442.55	PASS	AB=0.877;AC=21;AF=0.375;AN=56;BaseQRankSum=3.214;DP=919;FS=8.359;HRun=0;HaplotypeScore=250.9537;InbreedingCoeff=-0.5167;MQ=34.26;MQ0=37;MQRankSum=-4.075;QD=4.71;ReadPosRankSum=1.552;VQSLOD=1.1567;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:36,0:30:85.76:286,0,86	0/1:8,3:9:45.35:45,0,83	0/0:41,0:26:48.38:0,48,1019	0/0:48,0:37:65.59:0,66,1174	0/1:12,9:16:45.87:46,0,124	0/1:20,4:20:99:111,0,154	0/1:27,2:24:66.65:67,0,281	0/1:16,0:14:92.72:93,0,283	0/0:13,0:11:5.50:0,5,55	0/1:35,9:33:99:496,0,584	0/0:10,3:11:2.61:0,3,46	0/1:45,21:51:99:352,0,352	0/1:53,10:47:99:559,0,267	0/1:34,17:38:99:306,0,276	0/1:50,12:48:99:163,0,241	0/1:54,10:54:99:312,0,425	0/0:14,1:10:9.10:0,9,110	0/1:11,1:8:84.78:85,0,114	0/1:18,1:16:18.85:19,0,444	0/0:28,2:25:20.42:0,20,315	0/1:72,0:45:72.97:73,0,163	0/1:21,3:17:20.10:20,0,40	0/1:19,2:17:30.05:42,0,30	1/1:36,3:26:8.82:72,9,0	0/0:12,2:9:3.92:0,4,88	0/1:31,6:28:99:210,0,599	0/1:16,1:15:86.73:87,0,237	0/0:12,0:10:6.02:0,6,89
chr10	29705404	.	CACACATACAT	C	3998.83	PASS	AB=0.976;AC=22;AF=0.393;AN=56;BaseQRankSum=2.903;DP=910;FS=12.882;HRun=0;HaplotypeScore=286.8138;InbreedingCoeff=-0.5551;MQ=34.16;MQ0=37;MQRankSum=-3.845;QD=5.52;ReadPosRankSum=-2.239;VQSLOD=0.7607;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:34,0:28:99:478,0,201	0/1:10,1:9:81.56:82,0,126	0/0:41,0:26:77.73:0,78,2354	0/0:47,0:36:57.19:0,57,2601	0/0:20,1:16:12.02:0,12,292	0/0:22,0:18:2.16:0,2,396	0/1:29,0:24:24.23:24,0,731	0/1:15,0:13:92.67:93,0,875	0/1:13,0:11:18.12:18,0,62	0/1:44,1:33:99:379,0,1295	0/0:14,0:12:2.44:0,2,19	0/1:67,1:52:99:436,0,514	0/1:59,2:47:99:598,0,774	0/1:52,1:39:99:486,0,388	0/1:60,1:47:99:173,0,520	0/1:60,3:52:99:334,0,1040	0/1:16,0:10:99:99,0,118	0/1:11,1:8:27.42:169,0,27	0/1:19,0:17:30.68:31,0,913	0/0:28,1:24:21.08:0,21,820	0/1:73,0:45:89.66:90,0,509	0/1:22,1:16:20.38:20,0,95	0/1:21,0:17:41:41,0,86	1/1:35,2:25:10.65:75,11,0	0/1:13,1:9:79.12:79,0,159	0/1:37,0:28:99:159,0,1278	0/1:16,1:15:99:134,0,556	0/0:6,6:10:6.02:0,6,252
chr10	29705471	.	A	ACT	85.35	PASS	AB=0.952;AC=6;AF=0.115;AN=52;BaseQRankSum=3.459;DP=1446;FS=25.314;HRun=0;HaplotypeScore=301.5182;InbreedingCoeff=0.0435;MQ=24.09;MQ0=339;MQRankSum=-1.995;QD=0.24;ReadPosRankSum=-2.113;VQSLOD=1.1013;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:46,5:33:22.07:0,22,346	0/0:20,4:12:11.63:0,12,180	./.	./.	0/0:29,2:22:21.04:0,21,276	0/0:29,0:17:15.93:0,16,192	0/0:53,1:30:18.45:0,18,271	0/0:48,0:11:30.05:0,30,407	0/0:16,0:12:5.97:0,6,66	0/0:90,0:46:57.28:0,57,1482	0/0:30,5:28:3.43:0,3,47	0/1:86,6:60:20.05:20,0,754	0/1:65,2:41:16.48:16,0,631	0/0:69,4:47:21.96:0,22,542	0/0:72,2:45:26.93:0,27,317	0/1:68,4:48:84.80:85,0,607	0/0:45,1:20:29.52:0,30,378	0/0:25,4:14:4.09:0,4,326	0/0:45,0:14:39.59:0,40,551	0/0:32,5:21:21.01:0,21,266	0/0:181,12:105:12.60:0,13,826	0/0:47,3:30:14.99:0,15,215	0/0:27,2:20:3.76:0,4,40	1/1:51,7:33:2.67:49,3,0	0/0:35,3:19:14.49:0,14,149	0/1:60,1:34:30.14:30,0,1071	0/0:20,2:12:21.07:0,21,318	0/0:14,0:6:3.01:0,3,46
chr10	29705493	.	A	ACT	1549.54	PASS	AB=0.845;AC=13;AF=0.241;AN=54;BaseQRankSum=0.646;DP=1328;FS=48.817;HRun=0;HaplotypeScore=226.4850;InbreedingCoeff=-0.2851;MQ=25.46;MQ0=361;MQRankSum=-7.547;QD=2.64;ReadPosRankSum=2.409;VQSLOD=1.4674;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:42,4:27:32.79:0,33,469	0/0:21,3:13:17.36:0,17,212	./.	0/0:45,0:1:3.01:0,3,44	0/0:23,4:16:18.06:0,18,263	0/1:13,3:7:39.51:40,0,125	0/0:35,13:26:1.31:0,1,169	0/1:35,2:9:88.52:89,0,213	0/1:8,5:11:0.01:0,0,0	0/1:74,9:45:99:258,0,1235	0/0:24,3:22:12.51:0,13,181	0/1:53,20:46:99:367,0,219	0/1:44,11:31:85.90:86,0,410	0/1:42,14:31:76.43:157,0,76	0/0:51,14:37:20.54:0,21,258	0/1:40,12:32:84.71:85,0,444	0/1:39,9:23:90.59:91,0,485	0/1:29,3:19:15.58:16,0,553	0/1:51,2:9:88.46:88,0,279	0/0:30,2:19:30.02:0,30,459	0/0:183,26:130:99:0,102,1495	0/0:34,7:23:18.06:0,18,267	0/0:21,2:19:21.43:0,21,297	0/0:51,8:35:8.61:0,9,130	0/0:30,4:19:36.12:0,36,534	0/1:42,6:29:99:212,0,826	0/1:12,6:10:73.76:207,0,74	0/0:15,0:11:27.09:0,27,413
chr10	29705585	.	ACACATGCACT	A	1527.21	PASS	AB=0.983;AC=28;AF=0.519;AN=54;BaseQRankSum=-2.194;DP=677;FS=6.584;HRun=0;HaplotypeScore=165.9690;InbreedingCoeff=-0.1718;MQ=41.72;MQ0=90;MQRankSum=-0.881;QD=2.70;ReadPosRankSum=-3.105;VQSLOD=1.6151;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:27,1:20:28.89:40,0,29	1/1:6,0:6:3.01:34,3,0	0/1:45,0:10:9.43:9,0,83	0/0:55,0:24:36.12:0,36,734	0/1:11,0:10:27.18:97,0,27	1/1:11,0:9:5.87:56,6,0	0/1:15,0:12:0:0,0,0	0/0:21,0:17:8.35:0,8,125	0/0:6,0:3:3.01:0,3,57	0/1:33,0:23:82.38:219,0,82	0/0:7,0:7:5.64:0,6,70	0/1:37,0:27:47.12:220,0,47	1/1:32,0:20:10.46:127,10,0	0/1:28,0:19:0.01:0,0,1	1/1:32,0:19:1.09:3,1,0	0/1:25,0:19:7.94:60,0,8	0/1:23,1:16:24.58:69,0,25	0/1:20,1:17:99:109,0,131	0/1:26,0:7:33.89:34,0,47	1/1:14,0:13:8.93:112,9,0	0/1:77,4:64:41.88:42,0,88	0/1:27,0:22:78.16:78,0,162	1/1:10,0:10:10.27:127,10,0	0/1:26,2:23:58.06:138,0,58	0/1:8,0:7:0:0,0,0	0/1:22,1:18:29.31:102,0,29	0/0:8,0:7:5.90:0,6,86	./.
chr10	29705595	.	T	TCA	2484.67	PASS	AB=0.862;AC=32;AF=0.593;AN=54;BaseQRankSum=2.288;DP=720;FS=4.663;HRun=0;HaplotypeScore=119.5578;InbreedingCoeff=0.0510;MQ=39.21;MQ0=108;MQRankSum=4.243;QD=4.61;ReadPosRankSum=1.562;VQSLOD=2.6404;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:23,3:17:6.02:95,6,0	0/0:4,0:4:0.26:0,0,0	0/0:49,0:15:29.26:0,29,280	0/0:68,0:30:52.91:0,53,738	0/1:11,3:11:18.67:144,0,19	0/1:10,2:10:12.09:59,0,12	./.	0/0:14,0:9:8.48:0,8,125	1/1:2,3:2:3.01:53,3,0	1/1:18,8:17:29.96:429,30,0	1/1:9,0:8:5.40:98,5,0	0/1:33,10:28:71.18:112,0,71	1/1:32,6:21:8.75:84,9,0	0/1:25,4:20:0:0,0,0	0/0:34,5:22:0.89:0,1,1	0/1:26,5:24:12.08:64,0,12	0/1:20,4:14:32.91:76,0,33	0/1:15,3:13:3.72:249,0,4	0/1:23,1:6:19.79:32,0,20	1/1:11,3:11:8.70:119,9,0	1/1:75,13:61:14.40:227,14,0	1/1:23,5:20:19.42:290,19,0	0/1:11,3:13:18.64:50,0,19	0/1:32,6:28:0.86:272,0,1	1/1:14,0:13:2.97:20,3,0	0/1:23,1:19:43.98:61,0,44	1/1:9,1:7:6.02:103,6,0	0/1:7,2:9:0:0,0,0
chr10	29705599	.	ATG	A	773.18	PASS	AB=0.970;AC=23;AF=0.411;AN=56;BaseQRankSum=4.097;DP=763;FS=0.688;HRun=0;HaplotypeScore=122.2361;InbreedingCoeff=-0.1380;MQ=38.22;MQ0=123;MQRankSum=4.379;QD=1.53;ReadPosRankSum=0.135;VQSLOD=2.2575;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:27,2:21:44.95:45,0,50	1/1:5,0:5:2.08:7,2,0	0/0:54,0:15:30.06:0,30,531	0/0:68,1:31:69.65:0,70,1224	0/1:16,0:10:46.67:64,0,47	0/0:13,1:12:5.27:0,5,68	0/0:9,0:5:2.97:0,3,20	0/0:12,0:5:6.08:0,6,179	0/0:4,1:2:2.60:0,3,10	0/1:30,1:22:63:63,0,180	1/1:6,2:7:5.49:70,5,0	0/1:46,2:30:71.83:72,0,177	1/1:37,2:21:5.45:27,5,0	0/0:31,0:22:0.47:0,0,1	0/1:38,2:21:0.34:0,0,1	0/0:34,1:27:7.06:0,7,135	0/1:25,0:17:28.20:28,0,112	0/1:20,0:13:80.17:126,0,80	0/1:22,0:4:16.39:16,0,54	0/1:14,1:12:45.53:53,0,46	0/1:85,4:59:85.55:102,0,86	1/1:29,0:22:1.48:97,1,0	0/0:16,1:14:2.49:0,2,60	0/1:38,3:31:51.71:90,0,52	0/0:12,0:11:5.97:0,6,56	0/1:24,1:19:24.95:25,0,281	0/1:12,0:8:0.77:32,0,1	1/1:9,0:8:0.47:1,0,0
chr10	29705603	.	A	AGG	655.17	PASS	AB=0.976;AC=18;AF=0.321;AN=56;BaseQRankSum=4.197;DP=871;FS=15.933;HRun=0;HaplotypeScore=153.7239;InbreedingCoeff=-0.1715;MQ=35.16;MQ0=132;MQRankSum=2.683;QD=1.46;ReadPosRankSum=3.757;VQSLOD=1.3278;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:33,2:26:34.72:35,0,140	1/1:5,0:6:2.58:38,3,0	0/0:52,0:13:33.57:0,34,504	0/0:67,0:30:64.58:0,65,878	0/1:17,0:11:54.19:79,0,54	0/1:12,1:11:4.96:5,0,86	0/0:16,0:11:5.99:0,6,95	0/0:19,0:6:10.53:0,11,178	0/0:6,1:3:3.01:0,3,34	0/0:37,0:28:48.30:0,48,751	1/1:8,2:9:6.49:96,6,0	0/0:52,2:34:13.80:0,14,189	0/1:45,1:25:10.11:10,0,69	1/1:37,0:25:0.94:2,1,0	0/0:49,0:29:6:0,6,48	0/0:43,1:32:18.50:0,19,253	0/1:29,0:21:28.11:28,0,199	0/1:24,0:16:99:163,0,118	0/1:22,0:5:24.77:25,0,82	0/1:13,1:13:20.09:20,0,43	0/1:96,3:65:99:113,0,394	0/1:28,0:22:24.84:80,0,25	0/0:18,1:18:5.93:0,6,87	0/1:45,3:37:72.53:73,0,177	0/0:16,0:15:6.49:0,6,99	0/0:26,1:22:1.91:0,2,556	0/1:14,0:10:21:40,0,21	0/0:10,0:9:6:0,6,72
chr10	29705695	.	GCA	G	480.73	PASS	AB=0.827;AC=23;AF=0.479;AN=48;BaseQRankSum=0.188;DP=687;FS=8.451;HRun=0;HaplotypeScore=106.5053;InbreedingCoeff=0.2015;MQ=26.63;MQ0=141;MQRankSum=1.684;QD=1.33;ReadPosRankSum=1.696;VQSLOD=1.2485;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:16,7:11:6.91:46,7,0	0/0:3,0:2:0:0,0,0	0/0:63,1:13:7.54:0,8,557	0/0:72,0:18:54.10:0,54,787	1/1:13,4:9:0.90:34,1,0	0/1:8,3:5:0.01:0,0,0	./.	./.	1/1:8,4:5:0.47:1,0,0	0/1:25,4:17:31.90:164,0,32	0/0:11,6:13:0:0,0,0	0/1:27,5:17:19.13:19,0,27	0/0:33,1:20:14.99:0,15,149	0/1:29,8:22:0.06:0,0,0	1/1:30,7:26:6.35:66,6,0	0/0:25,2:18:2.54:0,3,37	0/0:18,4:12:3.01:0,3,33	0/1:14,6:16:11.80:194,0,12	./.	0/1:8,3:8:0:0,0,0	1/1:56,6:35:2.93:18,3,0	1/1:11,1:7:0.43:0,0,0	1/1:8,4:10:3.47:26,3,0	0/1:27,4:27:30.15:30,0,52	1/1:15,0:12:0.43:0,0,0	0/0:21,0:10:2.98:0,3,22	./.	0/0:8,0:6:3.90:0,4,39
chr10	29705779	.	T	TCA	38.60	PASS	AB=0.967;AC=13;AF=0.295;AN=44;BaseQRankSum=2.455;DP=1007;FS=2.337;HRun=0;HaplotypeScore=72.8195;InbreedingCoeff=0.1552;MQ=15.82;MQ0=641;MQRankSum=-2.417;QD=0.14;ReadPosRankSum=-2.285;VQSLOD=1.1871;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:7:2.99:0,3,42	1/1:11,0:4:1.22:3,1,0	./.	./.	0/0:16,0:4:3.01:0,3,42	0/0:21,1:6:2.49:0,2,9	./.	0/0:57,0:1:3.01:0,3,42	0/0:31,0:3:3.01:0,3,42	0/0:67,0:17:51.17:0,51,713	./.	0/0:61,1:22:8.07:0,8,124	0/1:51,2:22:37.85:38,0,131	0/0:58,1:23:2.98:0,3,42	1/1:54,2:16:0.82:2,1,0	0/1:40,3:16:28.15:28,0,151	0/0:22,1:8:6.02:0,6,84	0/1:14,1:3:13.97:14,0,36	1/1:17,1:2:3.01:54,3,0	1/1:23,1:12:1.72:4,2,0	./.	0/1:22,0:6:0:0,0,0	./.	0/0:29,1:12:6:0,6,84	0/1:26,0:14:0:0,0,0	0/0:45,1:10:27.09:0,27,378	0/0:25,0:7:7.26:0,7,119	0/0:13,1:4:6.02:0,6,84
chr10	29705819	.	ACACTCACACAGG	A	464.09	PASS	AB=1.000;AC=12;AF=0.400;AN=30;BaseQRankSum=-1.762;DP=565;FS=2.602;HRun=0;HaplotypeScore=37.9941;InbreedingCoeff=0.1946;MQ=13.59;MQ0=365;MQRankSum=0.211;QD=2.40;ReadPosRankSum=1.198;VQSLOD=1.2174;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/0:7,1:3:0.47:0,0,1	./.	./.	./.	./.	0/0:27,0:5:2.99:0,3,23	0/0:16,0:1:2.97:0,3,20	1/1:19,0:3:3.01:56,3,0	0/1:36,0:7:19.03:139,0,19	0/0:8,1:3:0:0,0,0	1/1:34,4:12:6.79:76,7,0	1/1:21,5:8:3.01:108,3,0	./.	0/0:29,1:7:0.47:0,0,1	1/1:27,3:8:5.98:56,6,0	./.	0/0:11,3:4:2.99:0,3,25	0/1:18,0:2:40.02:64,0,40	./.	./.	./.	./.	0/0:16,1:7:0.47:0,0,1	0/0:17,0:9:2.94:0,3,18	1/1:23,2:2:3.01:64,3,0	./.	./.
chr10	29705833	.	ACT	A	83.59	PASS	AB=1.000;AC=13;AF=0.382;AN=34;BaseQRankSum=0.127;DP=547;FS=0.000;HRun=0;HaplotypeScore=28.7773;InbreedingCoeff=0.4523;MQ=13.57;MQ0=340;MQRankSum=-0.127;QD=0.67;ReadPosRankSum=0.331;VQSLOD=1.0227;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:12,0:3:0:0,0,0	0/0:9,0:3:0:0,0,0	./.	./.	./.	0/0:4,1:2:2.97:0,3,20	1/1:19,3:4:3.01:46,3,0	1/1:16,0:1:2.97:20,3,0	0/0:18,1:3:3.01:0,3,41	0/0:28,0:7:14.97:0,15,208	0/0:8,0:3:0.47:0,0,1	0/0:33,0:11:11.94:0,12,106	1/1:25,0:9:2.74:12,3,0	./.	1/1:27,1:5:1.24:3,1,0	0/0:24,0:6:6.02:0,6,88	./.	1/1:11,1:3:2.92:17,3,0	1/1:8,2:2:6.02:92,6,0	./.	./.	./.	./.	./.	0/0:18,3:11:3.01:0,3,57	0/0:24,1:7:12.90:0,13,251	0/0:13,0:5:2.97:0,3,20	./.
chr10	29706073	.	ACT	A	709.96	PASS	AB=0.892;AC=23;AF=0.411;AN=56;BaseQRankSum=-3.770;DP=659;FS=13.538;HRun=0;HaplotypeScore=115.6602;InbreedingCoeff=-0.3131;MQ=32.87;MQ0=128;MQRankSum=2.077;QD=1.49;ReadPosRankSum=-0.043;VQSLOD=1.6296;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:15,5:7:3.36:3,0,52	0/1:8,0:5:11.97:12,0,125	0/0:33,0:3:8.52:0,9,110	0/0:24,0:6:11.67:0,12,142	1/1:16,2:10:5.98:71,6,0	1/1:12,1:7:6:70,6,0	0/1:24,3:13:21.93:22,0,158	0/0:26,0:16:45.13:0,45,869	0/1:20,4:16:30.83:31,0,215	0/1:33,3:15:90.54:91,0,372	0/0:11,0:6:6.02:0,6,116	0/0:44,1:20:2.82:0,3,365	0/1:23,5:14:67.56:68,0,99	1/1:27,5:11:2.98:46,3,0	0/1:23,3:18:0.41:0,0,334	0/1:18,3:13:68.28:68,0,320	0/1:22,3:17:28.75:29,0,582	0/1:13,1:8:5.91:6,0,271	0/0:13,0:5:15.05:0,15,288	0/1:19,1:17:45.84:49,0,46	0/1:66,14:46:99:146,0,679	0/1:18,2:13:13.49:13,0,123	0/0:9,2:7:5.23:0,5,115	0/0:18,2:11:24.08:0,24,462	0/1:9,4:11:15.51:16,0,43	0/1:25,2:14:81.66:82,0,412	0/1:12,3:7:30.58:31,0,195	0/1:9,0:5:14.95:15,0,73
chr10	29706097	.	ACT	A	2393.25	PASS	AB=0.953;AC=41;AF=0.732;AN=56;BaseQRankSum=4.910;DP=471;FS=5.901;HRun=0;HaplotypeScore=104.8433;InbreedingCoeff=0.0754;MQ=37.75;MQ0=47;MQRankSum=3.807;QD=6.11;ReadPosRankSum=6.476;VQSLOD=2.3177;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:9,2:4:5.92:46,6,0	1/1:6,0:3:5.81:33,6,0	0/0:28,0:11:16.74:0,17,425	0/0:35,0:18:44.88:0,45,707	1/1:10,1:5:6.01:63,6,0	0/1:6,0:4:16:16,0,52	1/1:16,0:10:11.92:86,12,0	0/1:20,0:15:34.40:34,0,328	0/0:15,0:9:11.91:0,12,224	0/1:18,0:12:71.62:72,0,233	1/1:11,0:6:8.68:64,9,0	1/1:27,1:19:23.62:191,24,0	0/1:15,1:10:11.08:39,0,11	1/1:16,0:7:2.98:25,3,0	1/1:20,1:14:20.63:158,21,0	0/1:20,1:16:50.43:124,0,50	0/1:19,1:16:19.25:215,0,19	1/1:12,0:6:14.79:97,15,0	0/1:10,0:8:25.38:25,0,210	1/1:11,0:11:8.79:60,9,0	1/1:45,8:32:37.85:365,38,0	1/1:17,0:14:14.83:123,15,0	1/1:9,2:9:5.91:41,6,0	1/1:17,0:11:23.67:161,24,0	1/1:7,0:7:4.86:44,5,0	0/1:17,4:14:62.69:301,0,63	0/1:7,1:6:39.56:122,0,40	1/1:4,0:4:8.88:60,9,0
chr10	29706099	.	TCA	T	5081.48	PASS	AB=0.656;AC=42;AF=0.750;AN=56;BaseQRankSum=2.981;DP=471;FS=2.124;HRun=0;HaplotypeScore=96.9216;InbreedingCoeff=0.1145;MQ=39.47;MQ0=50;MQRankSum=3.387;QD=12.96;ReadPosRankSum=6.506;VQSLOD=4.5634;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,5:4:6.01:84,6,0	1/1:3,3:3:6:84,6,0	0/0:27,0:11:16.79:0,17,426	0/0:37,0:19:40.31:0,40,727	1/1:4,7:5:6.01:84,6,0	0/1:2,4:4:35.93:36,0,48	1/1:5,11:9:12.04:168,12,0	0/1:12,4:12:99:141,0,233	0/0:15,0:9:12.04:0,12,193	0/1:11,6:11:99:219,0,174	1/1:4,7:6:8.81:126,9,0	1/1:5,25:20:25.45:348,25,0	1/1:6,10:10:5.94:84,6,0	1/1:5,11:7:2.99:42,3,0	1/1:6,15:14:21.06:293,21,0	0/1:5,16:16:20.50:270,0,20	0/1:4,16:15:14.89:464,0,15	1/1:4,8:6:15.05:210,15,0	0/1:6,4:8:99:105,0,194	1/1:3,9:12:8.94:126,9,0	1/1:23,32:33:56.67:796,57,0	1/1:6,11:14:14.99:210,15,0	1/1:5,6:9:6.02:85,6,0	1/1:4,13:11:24.08:336,24,0	1/1:2,5:7:4.90:82,5,0	0/1:12,10:14:37.90:388,0,38	0/1:2,5:6:35.74:176,0,36	1/1:0,3:4:9.03:126,9,0
chr10	29706115	.	ATAGG	A	211.91	PASS	AB=0.924;AC=9;AF=0.161;AN=56;BaseQRankSum=2.861;DP=489;FS=1.961;HRun=0;HaplotypeScore=111.0070;InbreedingCoeff=-0.0800;MQ=35.09;MQ0=78;MQRankSum=-2.905;QD=1.67;ReadPosRankSum=-4.527;VQSLOD=0.9450;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:6,2:4:6.49:0,6,109	0/0:8,0:4:11.92:0,12,147	0/0:25,0:13:32.62:0,33,845	0/0:33,0:19:37.86:0,38,777	0/0:12,1:6:3.48:0,3,60	0/1:6,1:5:11.98:12,0,48	0/0:21,0:9:12.04:0,12,236	0/0:8,0:4:12.04:0,12,215	1/1:11,1:8:1.86:16,2,0	0/1:15,1:10:67.48:67,0,349	0/0:10,0:6:11.91:0,12,190	0/1:29,1:19:10.64:11,0,366	0/0:16,1:10:0.79:0,1,57	0/0:18,0:7:6.92:0,7,75	0/1:20,1:13:11.74:12,0,194	0/0:18,0:13:19.07:0,19,333	0/0:21,1:14:36.09:0,36,661	0/0:13,2:9:18.06:0,18,327	0/0:6,0:3:9.03:0,9,161	0/0:15,0:11:10.40:0,10,174	0/0:61,8:36:57.67:0,58,1077	0/0:14,3:15:15.94:0,16,255	0/0:8,3:8:8.95:0,9,133	0/0:22,2:14:25.95:0,26,442	0/1:8,0:5:25.31:25,0,51	0/1:18,3:11:91.90:92,0,437	0/1:10,2:9:99:108,0,220	0/0:4,0:4:9.03:0,9,170
chr10	29706183	.	TCACACAGGCA	T	798.79	PASS	AB=0.968;AC=12;AF=0.231;AN=52;BaseQRankSum=0.876;DP=1513;FS=0.000;HRun=0;HaplotypeScore=186.5858;InbreedingCoeff=-0.2117;MQ=19.43;MQ0=609;MQRankSum=-1.630;QD=1.14;ReadPosRankSum=-2.866;VQSLOD=2.2497;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:19:22.87:0,23,340	0/0:13,0:4:2.70:0,3,44	./.	./.	0/0:33,0:12:3.01:0,3,116	0/1:37,1:20:71.19:71,0,344	0/1:49,0:13:40.97:63,0,41	0/0:34,0:1:3.01:0,3,72	0/1:40,3:14:58.68:59,0,253	0/0:81,0:27:58.29:0,58,1777	0/0:20,0:7:0:0,0,0	0/1:94,9:56:99:261,0,426	0/1:87,2:41:99:112,0,975	0/1:99,3:43:44.98:45,0,167	0/1:66,2:30:20.15:20,0,135	0/1:51,2:22:99:127,0,225	0/1:63,2:26:55.10:55,0,891	0/0:60,2:25:23.88:0,24,861	0/0:32,0:3:9.03:0,9,262	0/0:29,0:9:0.47:0,0,1	0/0:213,1:69:1.56:0,2,70	0/0:50,0:16:2.97:0,3,71	0/0:35,0:14:0:0,0,0	0/0:97,0:37:5.08:0,5,192	1/1:43,0:10:3.01:57,3,0	0/1:46,0:10:57.32:57,0,455	0/0:29,0:14:18.93:0,19,444	0/0:18,0:6:0.42:0,0,33
chr10	29706193	.	A	ACT	877.14	PASS	AB=0.935;AC=16;AF=0.333;AN=48;BaseQRankSum=2.592;DP=1668;DS;FS=1.293;HRun=0;HaplotypeScore=178.1666;InbreedingCoeff=-0.4254;MQ=19.78;MQ0=646;MQRankSum=-1.133;QD=0.92;ReadPosRankSum=-0.763;VQSLOD=2.3717;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:63,3:23:21.32:0,21,205	0/0:11,0:4:3.01:0,3,46	./.	./.	0/0:36,0:13:3.01:0,3,46	0/1:37,3:21:75.89:76,0,200	0/1:52,2:13:45.40:45,0,59	0/0:25,0:1:3.01:0,3,46	0/1:44,3:15:39.16:39,0,117	0/1:86,2:29:25.67:26,0,916	0/0:22,0:7:0:0,0,0	0/1:103,11:58:99:266,0,227	0/1:90,7:46:99:117,0,455	0/1:97,15:48:44.61:45,0,98	0/1:65,10:33:28.47:28,0,96	0/1:44,9:22:76.92:77,0,121	0/1:73,4:29:99:115,0,391	0/0:61,4:25:24.91:0,25,508	0/1:30,1:7:36.62:37,0,254	./.	0/0:250,0:83:2.93:0,3,48	0/0:58,1:18:2.72:0,3,46	./.	0/0:89,7:37:5.94:0,6,92	1/1:50,1:13:5.95:75,6,0	0/1:54,2:13:27.80:28,0,317	0/1:27,2:15:33.66:34,0,230	0/1:18,0:8:4.44:4,0,32
chr10	29706217	.	TCACACAGGCA	T	1264.46	PASS	AB=0.977;AC=17;AF=0.340;AN=50;BaseQRankSum=3.317;DP=1963;DS;FS=10.769;HRun=0;HaplotypeScore=262.7981;InbreedingCoeff=-0.3297;MQ=20.49;MQ0=642;MQRankSum=-0.873;QD=0.87;ReadPosRankSum=1.727;VQSLOD=0.7669;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:92,1:36:23.91:0,24,380	0/0:18,0:8:2.55:0,3,27	./.	./.	0/0:34,0:14:3.01:0,3,156	0/1:44,1:23:76.61:77,0,450	0/1:56,0:16:27.91:28,0,126	./.	0/0:60,0:15:20.49:0,20,295	0/1:112,1:40:99:174,0,2758	0/1:21,2:8:0:0,0,0	0/1:134,4:69:99:220,0,536	0/1:113,3:58:99:206,0,891	0/1:134,3:55:14.21:14,0,72	0/1:91,3:45:99:112,0,310	0/1:85,2:40:52.27:52,0,619	0/1:103,2:50:99:180,0,985	0/1:73,6:30:99:247,0,879	0/0:39,0:14:18.71:0,19,1133	0/1:47,0:19:0:0,0,0	0/1:248,2:92:4.41:4,0,159	0/0:62,0:18:2.90:0,3,154	0/0:38,0:14:0.47:0,0,1	0/0:110,5:42:3.06:0,3,158	1/1:64,0:21:1.45:4,1,0	0/1:68,1:16:49.98:50,0,1031	0/0:35,2:18:13.77:0,14,274	0/1:24,0:11:24.79:25,0,170
chr10	29706221	.	A	ACAGG	303.52	PASS	AB=0.965;AC=8;AF=0.160;AN=50;BaseQRankSum=2.084;DP=1992;DS;FS=6.542;HRun=0;HaplotypeScore=256.3051;InbreedingCoeff=-0.0768;MQ=20.52;MQ0=652;MQRankSum=-0.161;QD=0.60;ReadPosRankSum=-3.129;VQSLOD=1.4654;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:94,0:35:5.88:0,6,73	0/0:17,0:8:2.89:0,3,55	./.	./.	0/0:35,0:15:3.01:0,3,55	0/1:47,0:25:52.61:53,0,250	0/0:58,0:16:2.51:0,3,54	./.	0/0:63,0:15:14.87:0,15,268	0/0:117,0:40:39.33:0,39,1458	0/0:23,0:8:0.46:0,0,1	0/0:140,2:73:26.14:0,26,394	0/1:109,3:57:42.61:43,0,542	0/0:135,1:53:7.46:0,7,160	0/1:102,2:51:5.75:6,0,136	0/1:88,4:43:99:107,0,263	0/0:110,0:52:38.78:0,39,678	0/0:78,0:30:39:0,39,585	0/0:40,0:14:42.14:0,42,733	1/1:47,0:20:1.08:2,1,0	0/0:250,0:95:4.41:0,4,62	0/0:63,0:19:3:0,3,55	0/0:38,0:14:0:0,0,0	0/0:115,1:44:2.16:0,2,53	0/0:61,0:21:2.42:0,2,54	0/1:71,0:16:90.75:91,0,500	0/1:31,5:19:99:114,0,136	0/0:25,0:12:5.81:0,6,67
chr10	29706227	.	A	ACT	394.58	PASS	AB=0.984;AC=14;AF=0.280;AN=50;BaseQRankSum=2.198;DP=2004;DS;FS=10.766;HRun=0;HaplotypeScore=250.7671;InbreedingCoeff=-0.1931;MQ=20.49;MQ0=664;MQRankSum=-1.950;QD=0.42;ReadPosRankSum=-1.168;VQSLOD=0.7923;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:90,1:33:12.09:0,12,177	0/0:17,0:8:2.88:0,3,46	./.	./.	0/0:32,0:14:3.01:0,3,46	0/1:51,0:25:14.18:14,0,264	0/1:58,0:16:12.43:12,0,42	./.	0/0:63,0:15:17.99:0,18,233	0/1:116,2:42:3.14:3,0,1236	1/1:23,0:8:0.47:1,0,0	0/1:136,4:73:99:156,0,342	0/1:110,2:56:78.96:79,0,513	0/0:132,2:53:8.74:0,9,135	0/1:104,2:53:55.14:55,0,204	0/0:93,2:47:15.60:0,16,545	0/1:110,2:52:59.21:59,0,710	0/1:84,0:32:71.01:71,0,453	0/0:46,0:15:42.14:0,42,642	1/1:47,0:20:0.47:1,0,0	0/0:240,10:95:4.16:0,4,51	0/0:62,1:19:2.72:0,3,46	0/0:35,0:13:0:0,0,0	0/0:113,3:43:5.57:0,6,84	0/0:56,0:19:0.89:0,1,2	0/1:70,1:17:18.73:19,0,424	0/0:39,0:21:18.56:0,19,212	0/1:24,1:12:47.60:48,0,75
chr10	29706251	.	TCACACAGGCA	T	979.95	PASS	AB=0.988;AC=13;AF=0.260;AN=50;BaseQRankSum=5.292;DP=1755;DS;FS=7.731;HRun=0;HaplotypeScore=233.3946;InbreedingCoeff=-0.2919;MQ=20.45;MQ0=590;MQRankSum=-0.824;QD=1.16;ReadPosRankSum=-2.496;VQSLOD=1.1181;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:72,2:27:8.69:9,0,186	0/0:16,0:8:2.86:0,3,105	./.	./.	0/0:27,0:10:3.01:0,3,46	0/1:46,0:23:1.07:1,0,288	0/0:62,0:7:2.96:0,3,19	./.	0/1:50,0:9:33.50:34,0,44	0/1:92,1:35:53.63:54,0,2007	1/1:17,0:3:0.47:1,0,0	0/0:107,0:60:3.03:0,3,571	0/1:83,0:42:99:221,0,665	0/0:113,0:44:7.21:0,7,136	0/0:97,0:51:0.75:0,1,490	0/0:85,1:45:16.03:0,16,1228	0/1:94,0:45:99:228,0,909	0/1:68,0:30:99:311,0,550	0/1:50,1:13:92.94:93,0,1268	0/0:46,0:20:2.62:0,3,14	0/1:201,18:92:84.54:89,0,85	0/0:58,0:13:5.88:0,6,74	0/0:28,0:9:0.47:0,0,1	0/0:90,0:38:6.13:0,6,146	0/0:46,0:18:5.86:0,6,38	0/0:72,0:16:27.87:0,28,641	0/1:32,0:16:59.09:59,0,183	0/1:18,0:9:0.64:1,0,210
chr10	29706295	.	A	ACT	423.13	PASS	AB=0.961;AC=17;AF=0.370;AN=46;BaseQRankSum=1.929;DP=857;DS;FS=1.654;HRun=0;HaplotypeScore=94.0451;InbreedingCoeff=0.0286;MQ=19.86;MQ0=359;MQRankSum=-1.582;QD=0.77;ReadPosRankSum=-1.991;VQSLOD=1.7509;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:31,4:13:2.93:56,3,0	./.	0/0:11,0:2:6:0,6,69	0/0:19,0:3:8.98:0,9,92	./.	./.	0/1:24,0:1:0:0,0,0	./.	0/0:25,0:3:6.02:0,6,88	0/1:39,0:12:6.39:6,0,295	./.	0/1:44,3:26:10.99:11,0,82	0/1:37,0:18:31.79:32,0,187	0/1:50,4:17:25.85:62,0,26	0/0:47,3:26:4.20:0,4,49	0/1:38,6:22:99:103,0,203	0/1:42,4:26:61.87:62,0,181	0/1:30,2:14:99:113,0,162	0/0:40,0:8:24:0,24,316	0/1:18,0:8:0.02:0,0,0	1/1:100,3:35:2.83:38,3,0	0/0:24,0:4:0:0,0,0	0/1:9,0:3:0:0,0,0	0/1:40,2:12:0:0,0,0	0/0:17,0:5:0:0,0,0	0/0:36,0:7:14.99:0,15,180	1/1:19,1:10:3.01:58,3,0	0/0:15,0:6:6.02:0,6,91
chr10	29706322	.	CACATGCAG	C	558.56	PASS	AB=1.000;AC=19;AF=0.633;AN=30;BaseQRankSum=3.940;DP=279;DS;FS=15.071;HRun=0;HaplotypeScore=48.4665;InbreedingCoeff=0.4164;MQ=29.54;MQ0=100;MQRankSum=-2.435;QD=5.64;ReadPosRankSum=1.815;VQSLOD=-0.1019;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:10,0:3:3.01:75,3,0	./.	0/0:29,0:11:30.57:0,31,803	0/0:38,0:16:48.11:0,48,1082	./.	./.	0/0:3,0:1:0.47:0,0,1	./.	1/1:7,0:3:3.01:57,3,0	./.	./.	0/1:8,0:6:0.01:0,0,0	1/1:7,2:5:6.02:163,6,0	./.	1/1:13,2:7:2.43:81,2,0	0/0:9,0:4:0:0,0,0	1/1:12,0:4:4.50:22,4,0	1/1:8,1:3:3.01:82,3,0	1/1:11,0:3:2.50:18,3,0	./.	0/0:36,1:11:2.98:0,3,26	./.	./.	./.	./.	1/1:11,2:4:3.90:84,4,0	./.	1/1:4,1:2:3.01:82,3,0
chr10	29706327	.	G	GCA	103.05	PASS	AB=0.924;AC=12;AF=0.429;AN=28;BaseQRankSum=2.253;DP=193;DS;FS=8.667;HRun=0;HaplotypeScore=42.8133;InbreedingCoeff=0.3855;MQ=40.21;MQ0=39;MQRankSum=-1.530;QD=1.43;ReadPosRankSum=-1.003;VQSLOD=-0.3556;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:32,0:14:34.37:0,34,502	0/0:39,0:20:54.10:0,54,706	./.	./.	0/1:2,0:1:0:0,0,0	./.	0/0:4,0:1:1.25:0,1,3	./.	./.	1/1:8,0:5:2.93:18,3,0	0/0:4,0:2:5.60:0,6,26	0/1:7,1:3:0:0,0,0	1/1:11,0:5:2.04:6,2,0	./.	1/1:3,4:2:3.01:52,3,0	0/1:6,0:4:7.26:17,0,7	1/1:3,2:2:6.02:105,6,0	./.	0/1:19,6:12:0.01:0,0,0	./.	./.	./.	./.	0/0:6,0:3:2.79:0,3,13	./.	0/0:4,0:2:2.37:0,2,8
chr10	29706348	.	CACT	C	297.60	PASS	AB=0.913;AC=14;AF=0.269;AN=52;BaseQRankSum=-0.853;DP=612;FS=9.821;HRun=0;HaplotypeScore=170.3635;InbreedingCoeff=-0.0509;MQ=43.06;MQ0=53;MQRankSum=-1.662;QD=1.11;ReadPosRankSum=-5.912;VQSLOD=-0.3049;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:18,2:16:19.34:59,0,19	1/1:6,0:4:4.50:22,4,0	0/0:39,0:25:59.68:0,60,1184	0/0:50,0:33:43.09:0,43,1499	0/0:17,0:12:3.01:0,3,33	0/0:8,0:6:2.56:0,3,32	0/0:1,0:1:0:0,0,0	./.	0/0:19,0:14:2.05:0,2,75	0/0:13,0:11:2.03:0,2,158	0/1:3,0:3:0.02:0,0,0	1/1:32,3:22:3.48:53,3,0	0/1:30,4:22:5.27:5,0,96	0/0:34,4:20:3.08:0,3,33	0/1:25,8:17:27.25:45,0,27	0/1:20,5:16:47.25:88,0,47	0/1:21,1:17:47.94:48,0,82	0/1:23,1:16:10.63:11,0,220	0/1:4,1:5:39.11:39,0,86	0/0:13,0:8:12.54:0,13,71	0/0:92,1:68:32.86:0,33,405	0/0:12,0:9:0.87:0,1,2	./.	0/1:39,3:35:52.45:52,0,90	0/0:3,1:3:0.74:0,1,1	0/0:14,1:13:24.92:0,25,187	0/1:18,0:16:5.42:5,0,89	0/0:14,0:14:29.27:0,29,238
chr10	29706564	.	ACACACATGCACTCACACATACACTCACATATGCACT	A	3880.95	PASS	AB=1.000;AC=43;AF=0.827;AN=52;BaseQRankSum=-2.084;DP=869;FS=7.655;HRun=0;HaplotypeScore=452.8453;InbreedingCoeff=0.4323;MQ=33.74;MQ0=90;MQRankSum=4.063;QD=5.24;ReadPosRankSum=4.563;VQSLOD=0.6848;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:34,0:22:5.76:84,6,0	1/1:14,0:11:2.94:18,3,0	0/0:40,0:12:8.97:0,9,92	0/0:37,0:20:26.97:0,27,280	1/1:17,0:16:5.46:35,5,0	0/1:15,0:10:0:1,0,0	1/1:29,0:26:20.72:246,21,0	1/1:22,0:20:5.94:41,6,0	0/0:7,0:4:1.42:0,1,8	1/1:32,0:28:35.95:451,36,0	1/1:10,0:7:2.92:17,3,0	1/1:46,0:35:11.90:131,12,0	1/1:40,0:32:12.50:85,12,0	0/1:49,0:36:38.67:57,0,39	1/1:40,0:31:3.01:36,3,0	1/1:38,0:24:11.90:125,12,0	1/1:29,0:21:11.94:103,12,0	1/1:24,0:19:20.96:235,21,0	1/1:31,0:14:8.95:85,9,0	1/1:22,0:19:11.60:114,12,0	1/1:137,0:93:53.84:594,54,0	1/1:20,0:16:8.94:78,9,0	./.	./.	1/1:15,0:14:8.89:73,9,0	1/1:12,28:39:73.25:999,73,0	0/1:18,0:15:0.10:13,0,0	1/1:19,0:18:24:261,24,0
chr10	29706576	.	TCA	T	81.32	PASS	AB=0.944;AC=6;AF=0.107;AN=56;BaseQRankSum=3.287;DP=699;FS=24.151;HRun=0;HaplotypeScore=160.5692;InbreedingCoeff=0.1027;MQ=32.11;MQ0=82;MQRankSum=-3.794;QD=0.74;ReadPosRankSum=-2.515;VQSLOD=0.9276;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:16:12.04:0,12,196	0/0:11,0:8:5.51:0,6,107	0/0:39,0:10:21.07:0,21,347	0/0:42,0:22:54.09:0,54,858	0/0:16,0:14:11.85:0,12,151	0/0:13,0:8:2.43:0,2,52	0/0:21,0:18:29.68:0,30,536	0/0:14,0:12:27.09:0,27,428	1/1:2,2:2:6.02:84,6,0	0/0:25,0:22:52.59:0,53,950	0/0:11,0:7:2.82:0,3,21	0/1:27,2:22:23.73:24,0,117	0/0:31,1:24:27.63:0,28,446	0/1:37,2:28:45.55:74,0,46	0/0:35,1:27:2.53:0,3,53	0/0:30,2:17:18.06:0,18,306	0/0:16,0:10:18.06:0,18,321	0/1:14,2:11:8.86:9,0,506	0/0:19,1:7:18.06:0,18,324	0/0:18,0:17:27.44:0,27,424	0/0:106,0:68:83.59:0,84,1380	0/0:16,0:14:7.38:0,7,77	0/0:12,0:12:3.01:0,3,54	0/1:22,0:12:0.93:1,0,49	0/0:11,0:10:15.94:0,16,271	0/0:35,0:33:83.77:0,84,1420	0/0:20,0:15:9.50:0,10,160	0/0:14,0:13:30.06:0,30,499
chr10	29706598	.	ACT	A	452.38	PASS	AB=0.819;AC=20;AF=0.370;AN=54;BaseQRankSum=5.042;DP=496;FS=11.153;HRun=0;HaplotypeScore=112.2407;InbreedingCoeff=0.2273;MQ=30.44;MQ0=76;MQRankSum=-3.185;QD=2.20;ReadPosRankSum=-1.625;VQSLOD=1.4997;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:15,7:12:30.75:31,0,51	1/1:4,0:2:0.47:1,0,0	0/0:47,0:15:39.13:0,39,671	0/0:45,0:18:42.26:0,42,751	1/1:9,4:7:5.11:21,5,0	1/1:6,2:4:0.94:1,1,0	0/0:12,0:10:17.72:0,18,310	0/0:3,0:2:5.98:0,6,78	1/1:1,2:3:6.02:91,6,0	0/0:14,2:11:11.83:0,12,304	1/1:4,2:3:3.40:17,3,0	0/1:17,2:15:52.53:53,0,57	0/0:14,4:12:13.01:0,13,78	1/1:17,11:19:9.93:138,10,0	0/0:16,8:15:2.87:0,3,57	0/1:12,8:8:40.35:40,0,81	0/0:4,3:3:5.74:0,6,82	0/1:8,7:9:67.58:68,0,251	0/0:4,1:3:6.02:0,6,116	0/0:9,0:9:8.92:0,9,171	0/0:57,9:41:30.59:0,31,642	0/1:14,1:12:43.81:44,0,48	./.	1/1:12,7:10:5.04:35,5,0	0/0:7,0:7:6.02:0,6,113	0/1:31,3:30:67.39:67,0,635	0/0:5,7:6:2.39:0,2,16	0/0:13,1:12:20.95:0,21,296
chr10	29706634	.	ACT	A	210.12	PASS	AB=0.969;AC=12;AF=0.240;AN=50;BaseQRankSum=4.211;DP=1371;FS=0.000;HRun=0;HaplotypeScore=112.9241;InbreedingCoeff=-0.1042;MQ=16.04;MQ0=739;MQRankSum=-0.021;QD=0.34;ReadPosRankSum=-1.850;VQSLOD=1.6953;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,4:25:1.82:0,2,39	0/0:19,0:2:3.01:0,3,57	0/0:37,1:5:11.88:0,12,151	0/1:37,1:2:14.96:15,0,29	./.	./.	0/0:56,1:20:2.93:0,3,56	0/0:68,0:9:27.09:0,27,519	0/0:45,0:8:12.04:0,12,185	0/0:87,2:18:2.44:0,2,822	1/1:22,0:7:0.47:1,0,0	0/1:73,4:31:72.47:72,0,173	0/1:54,2:18:29.51:30,0,198	0/0:81,2:25:11.57:0,12,229	0/1:52,5:21:60.51:61,0,81	0/1:56,2:21:60.38:60,0,243	0/0:43,0:13:17.87:0,18,209	0/0:39,1:17:31.84:0,32,676	0/0:47,0:4:9.03:0,9,174	0/0:25,0:5:3.01:0,3,55	1/1:139,3:27:0.66:1,1,0	0/0:39,0:3:0:0,0,0	./.	0/1:51,0:17:1.91:2,0,52	0/0:19,0:5:0:0,0,0	0/1:84,2:37:49.18:49,0,526	0/1:26,0:9:36.03:36,0,107	0/0:12,0:4:9.03:0,9,173
chr10	29706704	.	TCA	T	229.45	PASS	AB=0.892;AC=13;AF=0.260;AN=50;BaseQRankSum=1.700;DP=1474;FS=6.807;HRun=0;HaplotypeScore=122.8875;InbreedingCoeff=0.0651;MQ=15.20;MQ0=866;MQRankSum=3.796;QD=0.47;ReadPosRankSum=1.969;VQSLOD=1.8314;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,8:23:12.17:0,12,187	0/1:19,1:6:35.92:36,0,48	./.	./.	0/0:41,3:17:0:0,0,0	0/0:26,4:6:1.25:0,1,3	0/0:36,4:12:1.55:0,2,28	0/0:21,0:2:3.01:0,3,54	0/0:67,0:15:22.63:0,23,364	0/0:90,6:19:4.11:0,4,614	./.	0/0:88,11:32:15.59:0,16,263	0/1:76,3:24:23.67:24,0,251	0/0:70,4:24:8.58:0,9,161	0/0:70,5:28:3.48:0,3,55	0/0:83,11:26:15.20:0,15,213	0/0:42,20:17:21.85:0,22,306	0/1:33,7:13:65.90:66,0,196	0/0:21,0:2:3.01:0,3,46	0/1:21,5:3:29.74:36,0,30	1/1:116,39:9:3.01:42,3,0	0/1:33,2:11:30.74:31,0,41	1/1:25,4:9:2.02:6,2,0	0/1:39,10:14:26.72:75,0,27	0/1:31,6:8:0:0,0,0	0/0:94,6:24:12.12:0,12,839	0/0:27,5:11:15.26:0,15,268	1/1:22,1:8:3.01:42,3,0
chr10	29706728	.	ACACATGCACT	A	250.39	PASS	AB=0.973;AC=6;AF=0.143;AN=42;BaseQRankSum=0.067;DP=1143;FS=0.000;HRun=0;HaplotypeScore=93.0831;InbreedingCoeff=0.1014;MQ=13.80;MQ0=767;MQRankSum=-1.795;QD=1.00;ReadPosRankSum=1.471;VQSLOD=1.6043;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:11:6.02:0,6,84	0/0:11,0:4:0:0,0,0	./.	./.	0/0:38,1:12:0.37:0,0,1	./.	1/1:39,0:7:0.47:1,0,0	./.	0/1:45,1:10:69.35:87,0,69	0/1:89,3:16:99:238,0,899	./.	0/0:67,0:16:3.01:0,3,90	0/0:54,0:9:11.77:0,12,301	0/0:40,0:8:0:0,0,0	./.	0/0:62,0:9:3.01:0,3,42	0/1:45,1:13:11.16:11,0,658	0/0:21,0:5:6.02:0,6,122	./.	0/0:24,2:3:3.01:0,3,56	0/0:121,0:3:3.01:0,3,85	0/1:26,1:14:0.33:1,0,0	0/0:25,0:7:0:0,0,0	0/0:34,2:10:9.03:0,9,210	0/0:32,0:7:0:0,0,0	0/0:78,0:18:10.26:0,10,1382	0/0:30,0:12:6.39:0,6,263	0/0:21,0:6:3.01:0,3,152
chr10	29706778	.	ACACTCACACAGG	A	633.25	PASS	AB=0.894;AC=17;AF=0.447;AN=38;BaseQRankSum=-2.585;DP=586;FS=0.000;HRun=0;HaplotypeScore=41.7383;InbreedingCoeff=0.3452;MQ=12.83;MQ0=410;MQRankSum=-1.175;QD=3.07;ReadPosRankSum=2.429;VQSLOD=0.6943;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,7:5:2.92:0,3,17	0/0:8,0:3:2.70:0,3,24	./.	./.	0/0:22,1:5:0.47:0,0,1	./.	1/1:23,0:5:3.01:37,3,0	./.	0/0:29,1:2:2.92:0,3,17	1/1:37,2:9:12.88:154,13,0	./.	0/0:28,1:4:0.47:0,0,1	1/1:19,3:4:9.03:146,9,0	./.	0/0:17,2:4:3.01:0,3,48	1/1:19,9:5:3.01:90,3,0	0/1:15,1:8:13.98:30,0,14	1/1:9,1:2:6.02:161,6,0	./.	0/0:16,1:4:0:0,0,0	./.	0/1:12,2:6:0:0,0,0	0/1:11,2:3:0:0,0,0	./.	0/0:20,1:4:0.47:0,0,1	1/1:32,0:8:9.01:112,9,0	0/0:13,1:7:0.34:0,0,1	1/1:9,0:3:2.04:6,2,0
chr10	29706862	.	ACACACATGCACT	A	169.24	PASS	AB=0.967;AC=10;AF=0.263;AN=38;BaseQRankSum=1.554;DP=1101;FS=1.697;HRun=0;HaplotypeScore=70.3516;InbreedingCoeff=0.0005;MQ=11.53;MQ0=727;MQRankSum=0.336;QD=0.34;ReadPosRankSum=-0.496;VQSLOD=0.9993;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:20,0:4:0:1,0,0	0/0:22,0:7:0:0,0,0	./.	./.	./.	0/0:22,0:1:2.97:0,3,20	0/0:44,0:2:0:0,0,0	./.	0/0:111,0:14:6.49:0,6,244	0/0:69,0:14:33.98:0,34,1032	./.	0/1:60,3:14:13.89:14,0,119	0/1:45,3:8:1.54:2,0,167	0/1:48,5:18:77.31:77,0,85	0/1:39,2:6:47.88:48,0,85	0/0:50,0:13:5.99:0,6,118	./.	./.	./.	0/1:39,0:12:0.34:1,0,0	0/1:122,3:4:0:1,0,0	0/0:47,0:18:1.20:0,1,3	./.	0/0:38,1:4:3.01:0,3,91	1/1:43,0:12:0.45:1,0,0	0/1:47,1:4:99:117,0,211	0/0:19,0:4:5.01:0,5,161	0/0:21,0:6:2.68:0,3,126
chr10	29707090	.	T	TCA	1440.51	PASS	AB=1.000;AC=12;AF=0.462;AN=26;BaseQRankSum=4.885;DP=287;FS=8.127;HRun=0;HaplotypeScore=54.0013;InbreedingCoeff=0.5043;MQ=52.81;MQ0=34;MQRankSum=-1.259;QD=15.01;ReadPosRankSum=6.050;VQSLOD=2.2200;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:8,0:4:0:0,0,0	./.	0/0:48,0:30:61.20:0,61,880	0/0:49,0:28:60.11:0,60,758	./.	./.	./.	0/0:5,0:4:8.99:0,9,76	1/1:12,44:41:75.25:1326,75,0	0/0:5,0:4:6:0,6,51	./.	1/1:11,0:6:3.01:40,3,0	./.	./.	./.	./.	./.	1/1:4,0:2:3.01:41,3,0	1/1:9,0:8:7.33:100,7,0	./.	0/0:23,0:16:12.43:0,12,96	./.	./.	1/1:4,0:3:2.50:9,2,0	./.	0/0:4,0:3:3:0,3,25	0/1:4,0:3:17.91:36,0,18	./.
chr10	29707096	.	A	AGG	288.96	PASS	AB=0.727;AC=17;AF=0.531;AN=32;BaseQRankSum=4.648;DP=279;FS=0.000;HRun=0;HaplotypeScore=66.5877;InbreedingCoeff=0.5036;MQ=52.62;MQ0=41;MQRankSum=-2.199;QD=6.72;ReadPosRankSum=0.228;VQSLOD=2.9469;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:8,2:4:3.46:0,3,25	1/1:2,0:1:2.98:21,3,0	0/0:60,0:35:91.47:0,91,1353	0/0:51,0:28:67.67:0,68,998	./.	./.	0/0:4,0:2:3:0,3,25	./.	0/0:55,1:40:23.27:0,23,117	./.	./.	1/1:3,3:5:3.01:60,3,0	0/1:5,3:4:0:0,0,0	./.	1/1:2,1:1:0.47:1,0,0	./.	0/0:7,3:5:2.60:0,3,10	1/1:5,1:2:5.99:82,6,0	1/1:9,0:6:9.03:161,9,0	./.	0/0:17,1:9:2.99:0,3,24	./.	./.	1/1:0,1:1:2.60:10,3,0	./.	1/1:4,1:3:2.37:8,2,0	1/1:1,2:1:3.01:60,3,0	./.
chr10	29707108	.	ACT	A	126.20	PASS	AB=0.929;AC=11;AF=0.239;AN=46;BaseQRankSum=2.625;DP=499;FS=1.031;HRun=0;HaplotypeScore=80.6596;InbreedingCoeff=-0.0599;MQ=38.25;MQ0=137;MQRankSum=0.246;QD=0.73;ReadPosRankSum=-3.471;VQSLOD=0.1586;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:9,3:4:0.47:0,0,1	0/0:2,0:2:3.01:0,3,58	0/0:49,0:25:31.22:0,31,974	0/0:41,0:19:39.40:0,39,790	0/0:10,0:2:3:0,3,25	1/1:7,0:4:2.04:6,2,0	./.	./.	0/1:55,1:46:75.02:75,0,1261	0/0:13,0:3:9:0,9,136	./.	0/0:26,0:12:5.87:0,6,75	0/1:16,1:7:29.01:29,0,69	0/0:18,0:6:0:0,0,0	1/1:23,0:11:0.40:1,0,0	0/1:10,1:4:13.91:40,0,14	0/0:13,4:9:8.99:0,9,124	0/1:17,1:9:4.94:5,0,208	0/0:16,0:4:11.77:0,12,153	./.	0/0:38,2:22:12.02:0,12,232	0/0:4,0:2:3.01:0,3,58	./.	0/0:15,1:7:2.94:0,3,58	0/0:10,0:5:8.99:0,9,115	0/1:16,5:15:34.64:35,0,487	0/1:10,0:5:34.99:35,0,49	0/1:4,0:2:14.05:16,0,14
chr10	29707214	.	T	TCA	1144.85	PASS	AB=0.768;AC=27;AF=0.675;AN=40;BaseQRankSum=-0.235;DP=545;FS=20.313;HRun=0;HaplotypeScore=85.1740;InbreedingCoeff=0.4909;MQ=38.59;MQ0=142;MQRankSum=-1.577;QD=4.03;ReadPosRankSum=3.783;VQSLOD=0.7376;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:9,5:5:0:0,0,0	./.	0/0:57,0:40:66.20:0,66,1005	0/0:56,0:28:31.19:0,31,868	./.	1/1:8,0:3:3.01:49,3,0	./.	./.	1/1:11,10:9:3.01:54,3,0	1/1:18,7:9:12.04:214,12,0	./.	0/1:28,8:17:0:0,0,1	1/1:10,8:8:14.74:223,15,0	0/1:16,8:11:0:0,0,0	1/1:20,14:15:2.54:25,3,0	1/1:20,5:12:0.89:2,1,0	./.	1/1:17,3:12:5.76:64,6,0	./.	0/0:9,11:10:1.92:0,2,4	0/0:23,20:17:0.86:0,1,2	./.	1/1:5,3:6:2.96:44,3,0	1/1:10,5:6:2.35:9,2,0	0/0:11,8:8:0.47:0,0,1	1/1:15,4:8:18.04:273,18,0	1/1:5,5:5:6.02:108,6,0	1/1:1,5:6:12.04:194,12,0
chr10	29707290	.	ACACACATGCACT	A	2937.20	PASS	AB=0.912;AC=28;AF=0.538;AN=52;BaseQRankSum=0.587;DP=1264;FS=18.825;HRun=0;HaplotypeScore=178.1993;InbreedingCoeff=-0.2994;MQ=18.83;MQ0=483;MQRankSum=2.039;QD=2.63;ReadPosRankSum=-2.102;VQSLOD=0.8001;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:43,3:16:28.31:32,0,28	0/1:13,9:18:28.21:28,0,59	./.	./.	0/1:26,5:15:0:0,0,0	0/1:21,0:12:33.16:33,0,307	0/1:68,14:25:23.04:23,0,29	1/1:57,0:1:3.01:40,3,0	0/1:41,0:21:20.81:328,0,21	0/1:68,2:21:99:543,0,461	0/0:26,6:14:0.41:0,0,1	0/1:71,11:43:99:465,0,393	0/1:33,20:30:89.63:90,0,203	0/1:60,6:41:99:338,0,132	1/1:48,36:52:0.76:52,1,0	0/1:43,9:26:99:254,0,196	0/1:24,1:9:47.84:155,0,48	0/0:33,1:11:9.02:0,9,190	1/1:18,5:5:7.27:231,7,0	0/1:30,2:17:0.43:1,0,0	1/1:110,0:34:0.87:64,1,0	1/1:37,1:20:2.67:17,3,0	1/1:30,1:16:0.64:1,1,0	0/1:40,0:17:0.17:0,0,0	0/0:43,3:25:4.06:0,4,39	0/1:62,3:20:99:359,0,1085	0/1:21,0:11:16.27:16,0,69	0/0:26,0:11:12.04:0,12,466
chr10	29707300	.	ACT	A	922.40	PASS	AB=0.970;AC=24;AF=0.429;AN=56;BaseQRankSum=1.131;DP=1318;FS=9.481;HRun=0;HaplotypeScore=163.9766;InbreedingCoeff=-0.3128;MQ=21.27;MQ0=460;MQRankSum=2.984;QD=0.85;ReadPosRankSum=-2.267;VQSLOD=1.7465;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:48,0:19:28.83:32,0,29	0/1:21,0:18:28.59:29,0,81	0/0:8,0:1:3.01:0,3,42	0/0:11,0:4:6.02:0,6,116	0/0:34,2:17:0:0,0,0	0/0:21,2:13:3.20:0,3,179	0/1:74,0:23:29.92:30,0,49	0/0:44,0:1:3.01:0,3,51	0/1:46,0:25:69.21:69,0,154	0/1:69,4:20:99:113,0,694	0/0:32,2:15:0.46:0,0,1	0/1:89,4:48:99:101,0,497	0/1:52,0:28:24.10:24,0,158	0/1:69,2:45:52.76:53,0,261	1/1:84,0:52:1.49:34,1,0	0/1:55,1:29:23.29:23,0,349	0/1:29,2:12:79.72:80,0,91	0/1:40,0:14:4.09:4,0,178	1/1:29,0:5:8.62:49,9,0	0/0:30,2:17:2.40:0,2,20	1/1:114,7:39:9.77:156,10,0	0/0:38,1:21:0.06:0,0,0	0/1:27,2:16:0.18:0,0,0	1/1:48,4:23:5.82:46,6,0	0/1:52,1:28:30.67:37,0,31	0/1:61,3:22:99:149,0,667	0/1:22,0:12:11.48:11,0,100	0/1:25,5:15:23.89:24,0,216
chr10	29707302	.	TCA	T	488.07	PASS	AB=0.975;AC=24;AF=0.429;AN=56;BaseQRankSum=3.595;DP=1366;FS=0.689;HRun=0;HaplotypeScore=171.4750;InbreedingCoeff=-0.2452;MQ=21.69;MQ0=458;MQRankSum=2.203;QD=0.42;ReadPosRankSum=-0.172;VQSLOD=2.7847;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:46,1:19:12.66:13,0,29	0/1:21,0:18:10.72:11,0,78	0/0:8,0:1:3.01:0,3,54	0/0:12,0:5:9.02:0,9,134	0/0:37,1:18:0:0,0,0	0/0:24,1:14:16.97:0,17,191	0/1:68,5:24:33.36:33,0,47	0/0:43,0:1:3.01:0,3,53	0/1:38,9:26:99:200,0,145	0/1:72,2:22:25.75:26,0,628	0/0:33,0:15:0.46:0,0,1	0/1:96,1:50:36.42:36,0,450	0/1:51,1:28:38.14:38,0,147	0/1:76,1:47:16.74:17,0,185	1/1:88,0:55:0.88:15,1,0	0/1:58,1:31:3.32:3,0,302	0/1:35,1:15:56.92:57,0,110	0/1:41,0:15:4.06:4,0,169	1/1:30,0:5:6.06:27,6,0	0/1:33,0:20:0.46:0,0,1	1/1:121,6:42:7:59,7,0	0/0:37,2:21:1.31:0,1,3	0/1:32,0:16:0.18:0,0,0	0/1:52,2:23:0.21:0,0,0	0/1:55,0:29:11.74:12,0,31	0/1:69,1:25:61.27:61,0,689	0/1:22,1:13:2.37:2,0,81	0/1:32,0:17:5.99:6,0,200
chr10	29707500	.	ACTCACACATACACTCACACAGG	A	13119.31	PASS	AB=0.970;AC=26;AF=0.464;AN=56;BaseQRankSum=5.675;DP=1055;FS=12.942;HRun=0;HaplotypeScore=410.1911;InbreedingCoeff=-0.5136;MQ=34.87;MQ0=135;MQRankSum=1.383;QD=14.31;ReadPosRankSum=5.034;VQSLOD=1.6442;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:37,0:31:99:132,0,604	0/1:13,0:9:99:270,0,164	0/0:22,0:12:26.95:0,27,315	0/0:25,0:6:12.04:0,12,161	0/0:13,0:9:3.01:0,3,192	0/1:18,0:12:99:198,0,208	1/1:46,0:40:31.51:976,32,0	0/1:34,21:32:83.88:848,0,84	0/0:52,0:39:6.97:0,7,2762	0/1:52,0:34:99:672,0,1297	1/1:14,0:10:5.99:49,6,0	0/1:78,1:63:99:1769,0,515	0/1:58,1:37:99:851,0,285	0/1:70,0:58:99:949,0,807	0/1:51,0:37:99:580,0,1010	0/1:35,1:28:99:1433,0,644	0/1:35,0:29:99:766,0,1322	0/1:26,0:21:99:357,0,1249	0/1:19,8:15:99:370,0,747	0/0:26,0:20:6.39:0,6,308	0/1:99,0:75:99:604,0,1286	1/1:24,0:18:6.83:74,7,0	0/1:21,0:17:26.97:53,0,27	0/1:38,2:31:99:359,0,753	0/1:27,0:19:99:223,0,442	0/1:44,0:29:99:793,0,1641	0/1:26,0:20:99:668,0,320	0/1:18,0:17:99:127,0,1045
chr10	29707558	.	A	ACT	653.76	PASS	AB=0.620;AC=1;AF=0.018;AN=56;BaseQRankSum=6.906;DP=1427;FS=0.861;HRun=0;HaplotypeScore=248.2400;InbreedingCoeff=-0.0240;MQ=38.73;MQ0=178;MQRankSum=-4.764;QD=11.47;ReadPosRankSum=-2.242;VQSLOD=2.9522;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:47:55.44:0,55,821	0/0:14,0:10:20.77:0,21,299	0/0:22,0:3:5.03:0,5,90	0/0:35,0:5:11.77:0,12,140	0/0:36,0:29:45.15:0,45,687	0/0:29,0:24:45.15:0,45,685	0/0:70,0:53:48.15:0,48,677	0/0:44,0:27:66.17:0,66,946	0/1:22,35:45:99:728,0,126	0/0:81,0:46:99:0,126,1872	0/0:25,0:17:30.10:0,30,457	0/0:88,0:71:99:0,131,1853	0/0:61,0:47:93.26:0,93,1375	0/0:74,0:62:99:0,120,1785	0/0:71,0:57:67.78:0,68,1668	0/0:45,0:34:50.41:0,50,1173	0/0:55,1:46:95.61:0,96,1452	0/0:38,1:33:63.45:0,63,836	0/0:32,0:16:39.11:0,39,551	0/0:24,0:19:26.99:0,27,413	0/0:179,5:148:99:0,193,2847	0/0:38,0:30:48.63:0,49,732	0/0:29,1:25:34.84:0,35,540	0/0:61,0:50:81.51:0,82,1233	0/0:28,0:19:36.12:0,36,550	0/0:68,0:42:99:0,117,1789	0/0:32,0:27:65.43:0,65,917	0/0:27,0:23:53.67:0,54,781
chr10	29707582	.	TCA	T	692.79	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.751;DP=1481;FS=5.992;HRun=0;HaplotypeScore=240.7433;InbreedingCoeff=0.9988;MQ=44.21;MQ0=113;MQRankSum=-3.948;QD=12.60;ReadPosRankSum=-2.347;VQSLOD=2.4055;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:53:90.82:0,91,1603	0/0:14,0:11:27.09:0,27,476	0/0:48,0:16:45.91:0,46,687	0/0:62,0:23:66.22:0,66,1115	0/0:50,0:41:66.23:0,66,1169	0/0:29,0:25:55.43:0,55,974	0/0:57,0:47:72.63:0,73,1224	0/0:55,0:42:99:0,120,1941	1/1:11,44:44:57.65:788,58,0	0/0:65,0:52:99:0,143,2514	0/0:26,0:20:36.12:0,36,644	0/0:84,0:75:99:0,166,2935	0/0:56,0:47:99:0,123,2175	0/0:74,0:65:99:0,149,2586	0/0:64,0:56:99:0,129,2261	0/0:47,0:39:99:0,102,1836	0/0:53,0:46:99:0,105,1812	0/0:41,0:38:95.87:0,96,1641	0/0:30,0:21:57.19:0,57,953	0/0:24,0:21:42.14:0,42,744	0/0:190,0:168:99:0,272,4924	0/0:41,0:35:72.25:0,72,1288	0/0:33,0:30:45.04:0,45,809	0/0:63,0:53:99:0,102,1830	0/0:32,0:25:51.12:0,51,882	0/0:60,0:43:99:0,120,2094	0/0:36,0:35:87.30:0,87,1539	0/0:34,0:30:71.61:0,72,1236
chr10	29709095	.	A	AGTGT	804.89	PASS	AB=0.990;AC=9;AF=0.173;AN=52;BaseQRankSum=-1.333;DP=687;FS=12.735;HRun=0;HaplotypeScore=121.1600;InbreedingCoeff=0.4643;MQ=67.42;MQ0=13;MQRankSum=0.086;QD=4.28;ReadPosRankSum=-0.406;VQSLOD=1.5111;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:32:45.25:45,0,122	0/0:3,0:5:6.01:0,6,75	./.	./.	0/0:19,0:20:18.03:0,18,216	0/0:19,0:19:4.24:0,4,49	0/0:29,0:28:32.44:0,32,420	0/0:23,0:23:4.25:0,4,45	1/1:5,9:15:3.48:71,3,0	0/0:20,0:20:18.52:0,19,254	0/1:24,0:23:2.97:3,0,105	0/0:18,0:24:29.95:0,30,396	0/0:22,0:23:17.54:0,18,357	0/0:19,0:21:24.41:0,24,311	0/0:18,0:19:27.54:0,28,379	0/0:31,0:34:42.03:0,42,466	1/1:27,17:48:17.48:295,17,0	1/1:9,13:25:26.61:519,27,0	0/0:15,0:19:9.48:0,9,85	0/0:21,0:20:15.05:0,15,233	0/0:35,0:33:12.03:0,12,182	0/0:19,0:20:11.56:0,12,259	0/0:20,0:23:24.06:0,24,313	0/1:41,0:40:12.04:12,0,536	0/0:21,0:21:15.03:0,15,212	0/0:26,0:25:18.05:0,18,231	0/0:26,0:25:21.40:0,21,289	0/0:8,0:8:9.03:0,9,139
chr10	29709914	.	T	TTAATAA	4197.56	PASS	AB=0.824;AC=40;AF=0.909;AN=44;BaseQRankSum=0.945;DP=240;FS=3.144;HRun=0;HaplotypeScore=57.3495;InbreedingCoeff=0.0944;MQ=63.35;MQ0=0;MQRankSum=-1.312;QD=19.80;ReadPosRankSum=-1.102;VQSLOD=2.8132;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:5,0:11:41.24:78,0,41	1/1:5,0:5:5.99:75,6,0	0/0:4,0:4:0.47:0,0,1	./.	1/1:12,0:16:9.03:228,9,0	1/1:7,0:11:9.03:208,9,0	1/1:4,0:4:6.02:146,6,0	1/1:31,0:31:42.10:769,42,0	./.	1/1:7,0:7:3.01:58,3,0	1/1:10,1:11:12.04:302,12,0	1/1:9,0:10:9.03:224,9,0	./.	./.	1/1:10,0:11:3.01:78,3,0	1/1:4,0:4:3.01:72,3,0	1/1:8,3:15:14.98:401,15,0	1/1:8,2:12:3.01:97,3,0	1/1:7,0:9:12.04:279,12,0	1/1:11,0:13:6.02:134,6,0	1/1:6,0:6:6.02:127,6,0	./.	0/1:6,0:6:0:0,0,0	./.	1/1:8,0:10:9.03:261,9,0	1/1:3,3:6:9.03:254,9,0	1/1:7,0:10:2.94:18,3,0	1/1:0,4:4:12.04:387,12,0
chr10	29710777	.	TACACACACACACAC	T	12145.61	PASS	AB=0.812;AC=48;AF=0.889;AN=54;BaseQRankSum=2.346;DP=599;FS=0.000;HRun=0;HaplotypeScore=241.8354;InbreedingCoeff=0.2674;MQ=54.97;MQ0=10;MQRankSum=-1.444;QD=22.00;ReadPosRankSum=2.055;VQSLOD=3.4782;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:15,5:19:19.84:112,0,20	1/1:4,6:10:9.03:272,9,0	0/0:17,0:9:3.01:0,3,41	0/0:14,0:8:6.02:0,6,76	1/1:14,15:30:11.57:309,12,0	1/1:10,13:24:15.05:528,15,0	1/1:9,11:20:9.03:353,9,0	1/1:27,0:26:6.01:107,6,0	1/1:9,0:21:7.64:98,8,0	1/1:14,15:29:44.88:1580,45,0	1/1:8,20:29:14.93:449,15,0	1/1:6,16:21:21.07:801,21,0	1/1:10,8:20:15.04:473,15,0	1/1:5,9:14:3.01:118,3,0	1/1:12,0:33:15.05:485,15,0	1/1:9,19:28:24.55:944,25,0	1/1:13,7:20:3.01:118,3,0	1/1:8,2:11:13.59:318,14,0	1/1:11,1:13:12.22:374,12,0	1/1:10,14:24:1.83:644,2,0	1/1:21,0:20:5.94:58,6,0	1/1:9,15:26:8.80:279,9,0	1/1:5,15:20:18.06:707,18,0	./.	1/1:13,11:24:8.51:245,9,0	1/1:13,16:29:42.14:1465,42,0	1/1:9,14:23:27.09:1061,27,0	0/1:11,3:14:99:248,0,137
chr10	29711535	.	GTTT	G	13544.32	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-8.143;DP=509;FS=3.639;HRun=12;HaplotypeScore=87.5789;InbreedingCoeff=0.9768;MQ=72.10;MQ0=0;MQRankSum=-4.815;QD=29.44;ReadPosRankSum=3.993;VQSLOD=4.4980;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,12:18:36.02:435,36,0	1/1:1,7:8:18.05:227,18,0	0/0:22,0:17:34.64:0,35,520	0/0:12,0:9:14.51:0,15,158	1/1:1,24:26:63.03:772,63,0	1/1:6,17:23:48.12:607,48,0	1/1:2,13:15:39.11:493,39,0	1/1:4,27:31:81.22:1009,81,0	0/0:1,0:15:14.95:0,15,32	1/1:2,20:22:60.19:758,60,0	1/1:3,17:20:48.11:606,48,0	1/1:1,15:16:39.11:493,39,0	1/1:4,18:22:45.13:569,45,0	1/1:2,15:17:30.09:379,30,0	1/1:4,14:18:39.10:493,39,0	1/1:2,12:14:30.09:379,30,0	1/1:3,17:20:36.08:455,36,0	1/1:2,7:9:15:190,15,0	1/1:2,20:22:60.09:711,60,0	1/1:0,21:22:60.08:738,60,0	1/1:2,15:17:36.03:437,36,0	1/1:3,10:13:30.03:361,30,0	1/1:3,13:16:36.09:455,36,0	1/1:1,14:15:39.12:492,39,0	1/1:0,13:13:39.12:493,39,0	1/1:4,24:28:72.19:895,72,0	1/1:0,26:26:65.77:834,66,0	1/1:2,7:9:21.06:265,21,0
chr10	29711783	.	T	TGC	249.70	PASS	AB=0.981;AC=9;AF=0.180;AN=50;BaseQRankSum=-0.303;DP=258;FS=3.108;HRun=0;HaplotypeScore=96.7539;InbreedingCoeff=0.0220;MQ=61.87;MQ0=7;MQRankSum=-3.320;QD=2.13;ReadPosRankSum=0.916;VQSLOD=1.8563;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:6:8.57:0,9,98	0/0:5,0:5:0.94:0,1,2	./.	0/1:28,0:6:1.24:1,0,4	0/0:8,2:10:3.01:0,3,41	0/0:15,0:15:14.43:0,14,341	0/1:7,0:7:62.30:62,0,64	0/1:39,2:39:99:116,0,915	0/0:2,0:2:6.01:0,6,72	0/1:10,1:11:69.10:69,0,181	0/1:7,0:7:0:0,0,0	0/1:8,0:8:12.85:13,0,99	0/0:4,0:4:3.95:0,4,37	0/0:2,0:2:3.01:0,3,41	./.	0/0:4,0:4:6.01:0,6,66	0/0:19,0:19:40.33:0,40,445	0/0:17,0:17:12.52:0,13,362	0/0:7,0:6:6.84:0,7,98	0/0:4,1:5:5.93:0,6,52	0/0:5,0:5:9.02:0,9,107	0/0:3,0:3:6.02:0,6,83	0/0:2,1:3:2.84:0,3,42	./.	0/1:9,0:9:15.38:15,0,105	0/0:8,0:8:10.97:0,11,200	0/0:10,0:10:8.60:0,9,111	1/1:6,0:5:6:91,6,0
chr10	29711819	.	C	CAT	9576.20	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-2.938;DP=337;FS=0.000;HRun=0;HaplotypeScore=77.5000;InbreedingCoeff=0.7124;MQ=67.79;MQ0=5;MQRankSum=-3.726;QD=30.99;ReadPosRankSum=3.159;VQSLOD=6.6702;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,13:16:27.08:450,27,0	1/1:3,4:7:8.50:107,9,0	0/0:14,0:10:14.86:0,15,158	0/0:14,0:4:6.45:0,6,48	1/1:4,11:14:12.04:213,12,0	1/1:2,18:20:35.84:638,36,0	1/1:1,10:11:21.07:373,21,0	1/1:7,31:39:93.19:1399,93,0	1/1:0,8:10:21.07:372,21,0	1/1:2,9:12:32.98:491,33,0	1/1:3,6:9:2.96:53,3,0	1/1:0,9:10:21.02:370,21,0	1/1:0,7:7:15.05:266,15,0	1/1:4,5:12:11.95:208,12,0	1/1:1,10:11:18.06:319,18,0	1/1:0,10:10:21.06:373,21,0	1/1:2,14:16:36.12:623,36,0	1/1:2,12:15:30.10:532,30,0	1/1:2,4:7:15.03:226,15,0	1/1:1,6:7:12.04:211,12,0	1/1:2,5:7:12.04:213,12,0	1/1:1,6:7:12.04:213,12,0	1/1:1,7:9:12.04:213,12,0	1/1:0,8:7:15.05:266,15,0	1/1:4,8:12:11.84:213,12,0	1/1:2,11:13:36.07:599,36,0	1/1:1,10:12:21.07:371,21,0	1/1:0,7:7:15.05:266,15,0
chr10	29715761	.	A	ACAGT	648.73	PASS	AB=0.938;AC=3;AF=0.054;AN=56;BaseQRankSum=-3.964;DP=642;FS=2.687;HRun=0;HaplotypeScore=103.1713;InbreedingCoeff=0.6464;MQ=80.01;MQ0=0;MQRankSum=-1.661;QD=24.95;ReadPosRankSum=-0.465;VQSLOD=3.3164;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,120,2193	0/0:10,0:10:30.10:0,30,552	0/0:21,0:21:39.25:0,39,822	0/0:14,0:14:32.52:0,33,554	0/0:22,0:22:57.18:0,57,1014	0/0:27,0:27:75.26:0,75,1400	0/0:24,0:24:63.15:0,63,1077	0/0:35,0:35:96.32:0,96,1758	1/1:0,11:11:27.09:720,27,0	0/0:16,0:16:42.14:0,42,784	0/0:24,0:24:60.21:0,60,1119	0/0:21,0:21:60.21:0,60,1119	0/0:23,0:23:66.23:0,66,1232	0/0:25,0:25:72.25:0,72,1343	0/0:30,0:30:84.29:0,84,1568	0/1:14,1:15:34.87:35,0,739	0/0:24,0:24:72.23:0,72,1304	0/0:30,0:29:81.25:0,81,1478	0/0:26,0:26:75.26:0,75,1399	0/0:23,0:23:69.24:0,69,1287	0/0:22,0:22:66.21:0,66,1200	0/0:14,0:14:39.13:0,39,722	0/0:21,0:21:60.21:0,60,1120	0/0:28,0:28:84.24:0,84,1521	0/0:26,0:26:78.25:0,78,1407	0/0:24,0:24:69.24:0,69,1287	0/0:29,0:28:84.26:0,84,1482	0/0:11,0:11:33.09:0,33,583
chr10	29717170	.	CTTTTTTTT	C	13128.34	PASS	AB=0.619;AC=45;AF=0.804;AN=56;BaseQRankSum=-0.188;DP=538;FS=3.438;HRun=20;HaplotypeScore=141.5521;InbreedingCoeff=0.4366;MQ=65.23;MQ0=16;MQRankSum=-4.482;QD=27.41;ReadPosRankSum=5.661;VQSLOD=-0.1614;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:33:23.60:363,24,0	1/1:3,5:7:8.87:188,9,0	0/0:25,0:14:20.41:0,20,344	0/0:19,0:13:15:0,15,194	1/1:6,13:20:29.42:455,29,0	1/1:5,7:15:32.05:562,32,0	0/1:4,12:15:69.14:357,0,69	1/1:9,11:20:35.28:619,35,0	0/0:5,0:13:25.02:0,25,532	1/1:11,17:29:47.01:898,47,0	1/1:8,12:18:32.65:648,33,0	0/1:4,10:14:4.17:600,0,4	1/1:7,11:21:32.53:624,33,0	1/1:5,8:14:20.76:441,21,0	1/1:10,15:24:41.50:800,41,0	1/1:4,9:13:29.78:597,30,0	0/1:9,14:24:11.17:641,0,11	1/1:5,14:18:17.87:378,18,0	0/1:13,9:20:20.07:499,0,20	1/1:5,8:13:26.86:512,27,0	1/1:4,5:9:4.44:89,4,0	0/1:11,16:27:4.76:666,0,5	1/1:5,10:15:17.91:377,18,0	1/1:6,12:18:13.77:422,14,0	1/1:3,14:19:28.74:518,29,0	1/1:10,19:29:32.01:992,32,0	1/1:9,10:19:28.87:522,29,0	1/1:2,6:8:18.06:361,18,0
chr10	29719211	.	CCTT	C	24575.88	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=1.191;DP=667;FS=42.207;HRun=0;HaplotypeScore=115.5697;InbreedingCoeff=0.9985;MQ=75.79;MQ0=0;MQRankSum=-8.431;QD=38.76;ReadPosRankSum=5.824;VQSLOD=3.2740;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,37:40:84.18:1372,84,0	1/1:1,9:10:27.01:382,27,0	0/0:17,0:17:42.08:0,42,844	0/0:16,0:16:36.13:0,36,734	1/1:1,22:23:48.16:784,48,0	1/1:1,28:29:72.20:1147,72,0	1/1:1,32:33:87.25:1391,87,0	1/1:6,17:23:48.16:768,48,0	1/1:3,22:25:63.22:1029,63,0	1/1:4,26:30:78.27:1268,78,0	1/1:2,15:17:30.10:490,30,0	1/1:0,39:39:99:1714,105,0	1/1:2,21:23:63.22:1029,63,0	1/1:1,22:23:66.23:1078,66,0	1/1:1,20:21:57.19:931,57,0	1/1:1,20:21:57.19:931,57,0	1/1:3,25:28:66.22:1067,66,0	1/1:2,24:26:63.22:1029,63,0	1/1:1,20:21:60.18:921,60,0	1/1:1,9:10:27.09:441,27,0	1/1:4,34:38:83.98:1342,84,0	1/1:1,24:25:38.84:608,39,0	1/1:1,16:17:39.13:637,39,0	1/1:2,21:23:42.61:687,43,0	1/1:2,24:26:57.15:902,57,0	1/1:1,25:26:75.26:1214,75,0	1/1:2,17:19:42.14:686,42,0	1/1:2,16:18:48.08:725,48,0
chr10	29721013	.	C	CA	31331.64	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-10.278;DP=771;FS=4.271;HRun=0;HaplotypeScore=66.0972;InbreedingCoeff=0.9978;MQ=85.77;MQ0=1;MQRankSum=-11.687;QD=43.46;ReadPosRankSum=5.468;VQSLOD=5.2134;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,46:47:99:1870,117,0	1/1:0,11:11:33.11:528,33,0	0/0:28,0:28:81.27:0,81,1117	0/0:22,0:22:66.21:0,66,907	1/1:0,36:36:99:1678,105,0	1/1:0,19:19:48.16:768,48,0	1/1:2,32:34:87.30:1391,87,0	1/1:2,29:30:87.24:1340,87,0	1/1:0,22:22:63.21:1007,63,0	1/1:0,31:31:93.32:1488,93,0	1/1:0,17:17:45.15:720,45,0	1/1:0,27:27:69.24:1103,69,0	1/1:1,29:30:84.29:1343,84,0	1/1:0,23:23:60.20:959,60,0	1/1:0,35:35:90.31:1439,90,0	1/1:0,35:35:99:1583,99,0	1/1:2,36:38:99:1631,102,0	1/1:0,24:24:66.23:1055,66,0	1/1:0,19:19:57.19:911,57,0	1/1:0,33:33:90.31:1439,90,0	1/1:0,39:39:99:1631,102,0	1/1:0,24:24:60.16:931,60,0	1/1:0,24:24:60.20:959,60,0	1/1:1,17:18:45.15:719,45,0	1/1:0,28:28:78.27:1247,78,0	1/1:0,28:28:84.29:1343,84,0	1/1:0,41:41:99:1912,120,0	1/1:0,7:7:21.07:336,21,0
chr10	29722080	.	CGTGTGT	C	5235.77	PASS	AB=0.991;AC=48;AF=0.923;AN=52;BaseQRankSum=3.619;DP=628;FS=3.201;HRun=0;HaplotypeScore=168.3213;InbreedingCoeff=0.3151;MQ=56.96;MQ0=25;MQRankSum=-2.676;QD=9.57;ReadPosRankSum=0.273;VQSLOD=3.3555;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:31,0:31:50.82:248,0,51	1/1:6,0:6:9.03:146,9,0	./.	./.	1/1:24,0:23:10.47:143,10,0	1/1:17,0:16:15.52:237,16,0	1/1:31,0:32:14.98:236,15,0	1/1:17,1:16:0.47:1,0,0	0/0:16,0:16:12.03:0,12,217	1/1:17,0:18:18.69:294,19,0	1/1:17,3:20:6.02:99,6,0	1/1:29,1:31:15.82:219,16,0	1/1:28,2:29:20.91:342,21,0	1/1:30,0:30:33.11:557,33,0	1/1:17,0:17:24.07:365,24,0	1/1:16,0:16:12.04:188,12,0	1/1:34,0:32:21.07:334,21,0	1/1:29,1:30:28.77:452,29,0	1/1:8,0:6:6.02:110,6,0	1/1:19,0:19:15.04:225,15,0	0/1:51,0:52:0.18:44,0,0	1/1:18,1:19:8.73:109,9,0	1/1:9,0:8:2.98:48,3,0	1/1:20,0:20:6.02:97,6,0	1/1:28,0:28:18.06:278,18,0	1/1:14,0:15:20.15:228,20,0	1/1:15,1:15:11.58:188,12,0	1/1:7,0:6:3.01:49,3,0
chr10	29722108	.	TGTGTGTGTGCGCGCGCGCGC	T	865.82	PASS	AB=0.865;AC=3;AF=0.058;AN=52;BaseQRankSum=-2.028;DP=572;FS=2.443;HRun=0;HaplotypeScore=242.6282;InbreedingCoeff=-0.0972;MQ=50.49;MQ0=17;MQRankSum=2.072;QD=13.74;ReadPosRankSum=-3.906;VQSLOD=1.7544;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:8,17:25:67.94:911,0,68	0/0:7,0:7:9.03:0,9,279	./.	./.	0/0:21,0:21:10.58:0,11,385	0/0:20,0:20:17.79:0,18,412	0/0:33,0:34:15.04:0,15,435	0/0:15,0:12:17.24:0,17,533	0/0:16,0:15:23.99:0,24,836	0/0:16,0:17:12.54:0,13,1086	0/0:19,0:19:6.02:0,6,180	0/0:32,0:33:10.93:0,11,430	0/0:29,0:28:20.45:0,20,617	0/0:27,0:27:31.68:0,32,1012	0/1:20,0:20:0.44:0,0,629	0/0:10,0:11:12.04:0,12,334	0/0:34,0:33:23.71:0,24,746	0/0:32,0:31:30.67:0,31,810	0/0:9,0:9:17.26:0,17,619	0/0:17,0:17:15.05:0,15,469	0/0:46,0:45:4.41:0,4,98	0/0:18,0:19:9.03:0,9,277	0/0:13,0:12:1.96:0,2,91	0/0:20,0:20:6.02:0,6,187	0/0:26,0:30:18.01:0,18,461	0/1:18,0:18:41.34:41,0,987	0/0:11,0:12:12.14:0,12,331	0/0:6,0:5:3.01:0,3,94
chr10	29722110	.	TGTGTGTGC	T	9210	PASS	AB=0.850;AC=49;AF=0.942;AN=52;BaseQRankSum=2.379;DP=551;FS=4.314;HRun=0;HaplotypeScore=145.0519;InbreedingCoeff=-0.0876;MQ=50.70;MQ0=16;MQRankSum=-0.381;QD=17.21;ReadPosRankSum=3.847;VQSLOD=3.9831;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:23:50.82:309,0,51	1/1:0,8:8:9.03:260,9,0	./.	./.	1/1:5,15:18:12.51:277,13,0	1/1:2,18:20:15.05:413,15,0	1/1:5,28:33:14.99:412,15,0	1/1:15,1:13:11.75:124,12,0	0/1:16,0:15:46.01:46,0,251	1/1:13,3:16:32.72:568,33,0	1/1:3,15:18:6.02:173,6,0	1/1:6,24:30:16.72:397,17,0	1/1:3,23:26:20.68:605,21,0	1/1:6,21:27:33.04:817,33,0	1/1:3,17:20:23.66:630,24,0	1/1:5,6:11:12.04:326,12,0	1/1:5,28:31:24.01:604,24,0	1/1:7,24:30:28.78:800,29,0	1/1:0,9:9:23.40:258,23,0	1/1:2,15:17:15.05:414,15,0	0/1:8,37:44:0.18:82,0,0	1/1:3,15:18:9:213,9,0	1/1:2,10:11:3.03:87,3,0	1/1:1,19:20:6.02:173,6,0	1/1:6,25:31:18.05:389,18,0	1/1:17,1:18:35.11:422,35,0	1/1:4,7:10:11.59:324,12,0	1/1:1,4:4:3.01:87,3,0
chr10	29722112	.	TGTGTGC	T	6322.87	PASS	AB=1.000;AC=50;AF=0.962;AN=52;BaseQRankSum=2.814;DP=523;FS=1.665;HRun=0;HaplotypeScore=140.2861;InbreedingCoeff=-0.0802;MQ=51.02;MQ0=14;MQRankSum=-0.861;QD=12.40;ReadPosRankSum=3.037;VQSLOD=4.2164;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:20,0:20:26.85:216,0,27	1/1:8,0:8:9.03:158,9,0	./.	./.	1/1:20,0:18:11.96:175,12,0	1/1:20,0:20:15.05:263,15,0	1/1:31,0:31:15.02:265,15,0	1/1:15,0:13:15.48:152,15,0	0/1:16,0:15:46.08:46,0,157	1/1:14,0:14:37.24:411,37,0	1/1:18,0:18:6.02:105,6,0	1/1:28,0:29:16.82:262,17,0	1/1:26,0:26:21.37:368,21,0	1/1:23,2:25:33.06:605,33,0	1/1:18,0:18:20.77:369,21,0	1/1:7,0:7:12.04:210,12,0	1/1:32,0:30:24.49:390,24,0	1/1:28,0:27:33.49:502,33,0	1/1:9,0:9:23.40:201,23,0	1/1:15,0:16:15.05:259,15,0	1/1:45,0:44:5.98:73,6,0	1/1:18,0:18:8.67:129,9,0	1/1:12,0:11:2.92:53,3,0	1/1:20,0:20:6.02:105,6,0	1/1:29,1:30:18.06:326,18,0	1/1:4,14:18:44.88:421,45,0	1/1:10,0:9:11.92:208,12,0	1/1:5,0:4:3.01:53,3,0
chr10	29722128	.	CGT	C	296.99	PASS	AB=0.978;AC=23;AF=0.426;AN=54;BaseQRankSum=11.349;DP=544;FS=4.064;HRun=0;HaplotypeScore=135.9003;InbreedingCoeff=-0.2495;MQ=56.46;MQ0=3;MQRankSum=-10.766;QD=0.72;ReadPosRankSum=11.053;VQSLOD=0.5149;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:23:13.08:53,13,0	1/1:7,0:7:6.48:19,6,0	./.	0/1:6,0:6:0.74:1,0,2	0/1:18,0:18:7.07:7,0,55	0/1:21,0:21:13.70:14,0,34	0/1:30,0:30:12.88:13,0,55	0/1:24,0:23:10.25:10,0,102	0/0:15,0:14:6.91:0,7,76	0/1:13,0:13:16.74:17,0,72	0/1:15,3:18:18.84:19,0,81	0/1:24,0:24:12.20:12,0,57	0/1:26,2:28:58.19:58,0,106	0/1:31,0:31:45.25:45,0,129	0/1:15,0:15:6.03:35,0,6	0/1:8,0:8:13.71:14,0,35	0/1:38,0:36:11.35:11,0,110	0/1:29,1:29:52.69:53,0,83	0/0:13,0:13:21.58:0,22,156	1/1:14,0:14:6.27:22,6,0	0/0:43,0:43:22.22:0,22,212	0/0:20,2:22:4.65:0,5,110	0/0:16,0:15:13.05:0,13,137	0/1:22,1:23:3.13:3,0,39	0/1:28,0:28:13.93:14,0,57	0/0:15,0:15:7.17:0,7,82	0/1:10,1:10:31.40:34,0,31	0/0:10,0:10:17.26:0,17,163
chr10	29724682	.	C	CCCCAA	5836.54	PASS	AB=1.000;AC=49;AF=0.875;AN=56;BaseQRankSum=-7.018;DP=383;FS=0.000;HRun=0;HaplotypeScore=72.8359;InbreedingCoeff=0.6222;MQ=83.05;MQ0=4;MQRankSum=-2.809;QD=19.26;ReadPosRankSum=-2.841;VQSLOD=3.2563;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,0:22:8.65:56,9,0	1/1:5,0:5:12.04:190,12,0	0/0:41,0:27:57.42:0,57,626	0/0:21,0:17:27.71:0,28,234	1/1:1,5:10:20.98:243,21,0	1/1:0,5:14:3.01:93,3,0	1/1:1,8:16:15.05:375,15,0	1/1:1,0:8:23.24:261,23,0	0/0:17,0:17:33.80:0,34,407	1/1:3,0:10:24.53:300,25,0	1/1:6,0:18:33.88:424,34,0	1/1:2,0:8:6.49:136,6,0	1/1:6,0:7:18.06:270,18,0	1/1:1,3:13:9.02:184,9,0	1/1:3,0:6:12.04:190,12,0	1/1:1,7:10:15.05:423,15,0	1/1:1,0:23:12.80:168,13,0	1/1:1,0:20:12.92:160,13,0	1/1:8,0:16:14.45:509,14,0	1/1:2,9:13:14.93:209,15,0	1/1:2,0:6:6:66,6,0	1/1:2,0:19:32.71:347,33,0	1/1:5,0:8:5.56:73,6,0	1/1:2,0:11:3.48:59,3,0	1/1:2,1:7:4.83:39,5,0	1/1:1,10:15:36.11:573,36,0	1/1:7,1:16:24.08:429,24,0	0/1:2,0:2:3.63:58,0,4
chr10	29726009	.	CTGTGTGTGTG	C	10983.31	PASS	AB=0.843;AC=43;AF=0.768;AN=56;BaseQRankSum=1.774;DP=510;FS=4.740;HRun=0;HaplotypeScore=155.2926;InbreedingCoeff=0.5714;MQ=58.67;MQ0=14;MQRankSum=-5.298;QD=28.98;ReadPosRankSum=2.162;VQSLOD=4.4689;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:14,6:20:14.39:449,14,0	1/1:4,8:11:24.08:720,24,0	0/0:39,0:19:12.04:0,12,431	0/0:43,0:21:13.53:0,14,233	1/1:9,6:15:9.03:267,9,0	1/1:10,4:14:9.03:219,9,0	1/1:7,5:12:9.34:356,9,0	0/1:23,0:22:19.98:20,0,144	0/0:14,0:16:39.13:0,39,1616	1/1:9,4:11:9.03:232,9,0	1/1:6,5:11:6.02:160,6,0	1/1:3,11:14:21.07:630,21,0	1/1:13,7:21:18.06:520,18,0	1/1:3,8:11:21.07:627,21,0	1/1:5,11:17:33.11:970,33,0	1/1:7,11:19:26.99:810,27,0	0/0:15,0:22:24.58:0,25,205	0/0:5,0:10:7.79:0,8,31	1/1:10,2:12:9.03:269,9,0	1/1:12,11:23:28.92:878,29,0	0/1:19,4:21:24.88:81,0,25	1/1:3,6:8:12.04:338,12,0	1/1:9,10:18:15.05:450,15,0	1/1:5,1:6:3.01:90,3,0	0/1:10,9:17:17.03:714,0,17	1/1:10,8:17:24.06:613,24,0	1/1:14,18:33:18.98:1147,19,0	1/1:4,9:13:15.05:421,15,0
chr10	29727209	.	ACTC	A	24840.57	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=2.606;DP=625;FS=0.000;HRun=0;HaplotypeScore=112.0427;InbreedingCoeff=0.9984;MQ=83.77;MQ0=0;MQRankSum=-9.616;QD=44.28;ReadPosRankSum=6.710;VQSLOD=6.1784;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,37:37:99:1727,105,0	1/1:0,9:9:27.09:444,27,0	0/0:28,0:28:76.47:0,76,1655	0/0:17,0:17:47.28:0,47,1096	1/1:2,21:23:54.18:918,54,0	1/1:0,18:18:45.15:765,45,0	1/1:1,14:15:30.10:512,30,0	1/1:5,28:33:84.27:1400,84,0	0/0:19,0:19:54.19:0,54,1225	1/1:0,26:26:78.27:1331,78,0	1/1:0,28:28:72.25:1213,72,0	1/1:0,18:18:45.15:766,45,0	1/1:1,17:18:39.13:665,39,0	1/1:1,23:24:69.24:1177,69,0	1/1:0,33:33:84.29:1430,84,0	1/1:0,17:17:51.17:869,51,0	1/1:0,12:12:30.10:511,30,0	1/1:2,14:16:42.14:702,42,0	1/1:3,11:14:33.11:563,33,0	1/1:1,29:30:84.24:1397,84,0	1/1:1,17:18:42.03:713,42,0	1/1:0,19:19:57.20:971,57,0	1/1:0,16:16:45.15:762,45,0	1/1:1,26:27:57.19:971,57,0	1/1:0,24:24:66.23:1124,66,0	1/1:1,32:33:96.33:1614,96,0	1/1:2,42:44:99:1889,111,0	1/1:0,9:9:24.08:409,24,0
chr10	29729258	.	GA	G	678.21	PASS	AB=0.863;AC=11;AF=0.196;AN=56;BaseQRankSum=6.856;DP=496;FS=1.072;HRun=12;HaplotypeScore=55.2717;InbreedingCoeff=0.1571;MQ=73.92;MQ0=0;MQRankSum=-1.297;QD=5.47;ReadPosRankSum=1.367;VQSLOD=1.4344;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,1:34:58.33:0,58,741	0/1:8,1:9:8.21:8,0,107	0/0:16,0:13:5.04:0,5,110	0/1:12,1:13:17.11:17,0,52	0/0:20,1:21:15.84:0,16,342	0/0:21,1:22:29.85:0,30,472	0/0:16,1:17:15.82:0,16,330	0/0:20,1:21:27.85:0,28,455	0/1:5,1:6:14.22:14,0,52	0/0:15,1:16:6.82:0,7,251	0/1:13,2:15:22.42:22,0,159	0/0:16,1:17:24.76:0,25,396	0/0:17,0:17:36.03:0,36,343	0/0:17,2:19:1.97:0,2,369	0/0:21,2:24:16.48:0,16,511	0/1:11,2:13:19.43:19,0,181	1/1:5,18:24:55.40:423,55,0	1/1:5,13:19:34.87:261,35,0	0/0:21,1:22:24.87:0,25,411	0/0:20,0:20:42.96:0,43,423	0/0:19,0:19:39.08:0,39,396	0/1:9,2:11:35.91:36,0,183	0/1:10,3:13:32.39:32,0,240	0/0:20,1:20:27.84:0,28,452	0/0:12,0:13:32.90:0,33,319	0/0:17,2:21:17.83:0,18,370	0/0:19,1:22:27.53:0,28,418	0/0:10,0:10:6.01:0,6,61
chr10	29730145	.	CTGTGTGTG	C	5077.27	PASS	AB=0.826;AC=43;AF=0.796;AN=54;BaseQRankSum=-0.430;DP=578;FS=5.242;HRun=0;HaplotypeScore=155.0554;InbreedingCoeff=0.2322;MQ=59.38;MQ0=15;MQRankSum=-2.051;QD=10.85;ReadPosRankSum=1.839;VQSLOD=3.6735;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:21,1:32:13.17:95,0,13	1/1:4,0:5:3.01:56,3,0	0/0:31,0:13:3:0,3,27	0/0:39,0:19:0.89:0,1,2	1/1:16,7:24:3.01:56,3,0	1/1:8,9:17:18.06:453,18,0	1/1:17,6:23:9.03:227,9,0	./.	0/0:14,0:20:12.03:0,12,358	1/1:6,5:11:11.99:188,12,0	1/1:9,2:11:0.47:1,0,0	1/1:10,5:16:15.05:358,15,0	1/1:14,5:19:15.05:375,15,0	1/1:12,9:23:24.08:565,24,0	1/1:8,5:13:12.04:302,12,0	1/1:12,13:26:30.10:735,30,0	1/1:16,0:22:5.38:64,5,0	0/1:14,0:14:46.79:47,0,136	1/1:12,2:14:6.02:151,6,0	1/1:14,5:19:6.02:151,6,0	0/1:33,8:41:4.22:50,0,4	1/1:15,6:22:6.02:131,6,0	0/1:10,7:17:0.31:0,0,0	1/1:20,7:27:6.02:131,6,0	1/1:9,3:14:12.50:232,12,0	0/1:23,0:23:52.49:165,0,52	1/1:12,11:24:20.90:468,21,0	1/1:3,2:5:3.01:76,3,0
chr10	29731733	.	C	CT	513.16	PASS	AB=0.923;AC=12;AF=0.214;AN=56;BaseQRankSum=-2.072;DP=581;FS=5.931;HRun=13;HaplotypeScore=120.5488;InbreedingCoeff=-0.0397;MQ=70.32;MQ0=4;MQRankSum=-2.323;QD=2.30;ReadPosRankSum=-2.801;VQSLOD=0.0756;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:7,28:36:50.89:456,51,0	0/0:6,0:6:10.93:0,11,67	0/1:20,0:13:4.95:5,0,17	0/0:25,0:20:10.59:0,11,90	0/0:31,3:35:19.77:0,20,266	0/1:23,0:24:52.67:53,0,184	0/0:21,0:22:40.56:0,41,269	0/0:25,0:26:10.88:0,11,117	0/0:14,0:14:22.50:0,23,147	0/0:25,0:25:14.69:0,15,152	0/1:15,2:16:16.06:16,0,49	0/1:17,1:19:11.17:11,0,71	0/0:14,0:14:24.90:0,25,165	0/1:16,1:17:27.37:27,0,118	0/0:20,0:21:37.28:0,37,249	0/0:12,0:12:26.68:0,27,185	0/0:24,0:25:43.47:0,43,290	0/0:26,1:29:53.46:0,53,339	0/0:16,1:19:3.70:0,4,124	0/1:18,3:23:55.47:55,0,198	0/1:10,2:12:4.10:4,0,117	0/0:12,0:12:26.74:0,27,185	0/1:19,2:20:4.40:4,0,115	0/0:18,3:21:19.66:0,20,277	0/0:22,0:24:18.27:0,18,208	0/1:18,2:20:19.99:20,0,132	0/0:27,0:27:21.76:0,22,195	0/1:12,2:14:7.23:7,0,100
chr10	29732081	.	TAGGG	T	905.50	PASS	AB=1.000;AC=31;AF=0.861;AN=36;BaseQRankSum=0.839;DP=67;FS=21.457;HRun=0;HaplotypeScore=22.7148;InbreedingCoeff=0.3092;MQ=111.59;MQ0=2;MQRankSum=-1.728;QD=22.09;ReadPosRankSum=-3.931;VQSLOD=1.0338;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,0:3:6.02:95,6,0	./.	0/0:12,0:10:27.06:0,27,633	0/0:10,0:10:20.52:0,21,616	./.	./.	./.	1/1:1,0:1:3.01:52,3,0	./.	1/1:0,4:4:12.01:146,12,0	1/1:1,0:1:3:26,3,0	1/1:1,0:1:3.01:48,3,0	1/1:2,0:2:6:65,6,0	1/1:1,0:1:2.90:16,3,0	1/1:4,0:4:9:99,9,0	1/1:1,0:1:2.99:24,3,0	1/1:4,0:4:8.97:71,9,0	./.	1/1:4,0:4:11.98:129,12,0	1/1:2,0:2:6:53,6,0	1/1:5,0:3:3.01:48,3,0	./.	1/1:2,0:2:6.01:58,6,0	1/1:3,0:2:3:27,3,0	./.	0/1:3,0:3:35.17:67,0,35	./.	./.
chr10	29732871	.	TA	T	10906.36	PASS	AB=0.893;AC=54;AF=0.964;AN=56;BaseQRankSum=-2.011;DP=596;FS=5.873;HRun=11;HaplotypeScore=89.7967;InbreedingCoeff=0.2669;MQ=72.89;MQ0=0;MQRankSum=-2.496;QD=18.30;ReadPosRankSum=3.032;VQSLOD=5.6905;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,36:43:71.92:824,72,0	1/1:0,7:7:20.91:163,21,0	0/1:12,1:12:2.63:3,0,127	0/1:15,3:17:35.39:35,0,82	1/1:3,19:22:44.72:359,45,0	1/1:4,22:26:59.92:492,60,0	1/1:1,13:14:32.96:271,33,0	1/1:7,16:23:44.93:369,45,0	1/1:3,27:30:74.90:615,75,0	1/1:1,19:20:53.92:443,54,0	1/1:4,10:15:28.74:209,29,0	1/1:0,15:15:41.95:345,42,0	1/1:4,15:19:38.93:320,39,0	1/1:2,16:18:44.95:369,45,0	1/1:4,23:27:59.92:493,60,0	1/1:2,13:15:35.96:296,36,0	1/1:2,18:20:53.93:443,54,0	1/1:0,18:18:53.94:443,54,0	1/1:2,19:21:53.90:441,54,0	1/1:5,16:21:47.89:393,48,0	1/1:4,24:28:62.91:517,63,0	1/1:3,21:24:21.89:381,22,0	1/1:3,14:18:40.68:325,41,0	1/1:0,21:21:56.94:468,57,0	1/1:2,26:28:68.89:563,69,0	1/1:4,21:25:59.62:490,60,0	1/1:5,26:31:45.92:584,46,0	1/1:4,11:16:31.98:252,32,0
chr10	29733449	.	TACACACAC	T	9653.33	PASS	AB=0.720;AC=48;AF=0.889;AN=54;BaseQRankSum=0.260;DP=506;FS=4.756;HRun=0;HaplotypeScore=142.1592;InbreedingCoeff=0.2853;MQ=59.73;MQ0=7;MQRankSum=-0.373;QD=22.14;ReadPosRankSum=3.723;VQSLOD=4.1874;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:36:8.70:47,9,0	1/1:3,7:10:21.07:531,21,0	0/0:22,0:11:3.01:0,3,109	0/0:23,0:12:3.01:0,3,123	1/1:14,11:25:16.17:392,16,0	1/1:8,5:13:9.03:227,9,0	0/1:10,8:19:86.39:341,0,86	1/1:18,3:21:8.98:148,9,0	1/1:12,13:25:39.13:982,39,0	1/1:13,9:22:27.09:682,27,0	1/1:8,7:15:9.03:189,9,0	1/1:7,6:14:18.06:435,18,0	1/1:10,8:18:18.06:455,18,0	1/1:7,6:13:12.04:303,12,0	1/1:3,11:14:15.05:379,15,0	1/1:6,12:18:30.10:758,30,0	1/1:9,4:13:3.01:76,3,0	0/1:11,5:16:56.67:219,0,57	1/1:9,4:14:8.16:193,8,0	1/1:10,5:17:9.03:207,9,0	./.	1/1:1,4:5:12.04:303,12,0	1/1:7,8:15:12.04:303,12,0	1/1:14,9:23:6.02:152,6,0	1/1:5,10:15:30.10:738,30,0	1/1:12,8:20:21.07:530,21,0	1/1:7,13:20:36.12:910,36,0	1/1:7,6:13:6.02:152,6,0
chr10	29734269	.	T	TA	7761.58	PASS	AB=0.786;AC=50;AF=0.893;AN=56;BaseQRankSum=-6.000;DP=510;FS=8.628;HRun=13;HaplotypeScore=60.7696;InbreedingCoeff=0.5490;MQ=80.21;MQ0=0;MQRankSum=-1.371;QD=16.20;ReadPosRankSum=1.680;VQSLOD=5.8356;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,23:28:12.74:391,13,0	1/1:1,3:4:6.01:56,6,0	0/1:28,0:17:2.99:3,0,15	0/0:19,0:17:1.87:0,2,55	1/1:1,15:16:41.92:371,42,0	1/1:3,20:23:48.05:446,48,0	1/1:1,6:8:17.86:154,18,0	1/1:9,22:33:36.74:584,37,0	0/0:11,0:11:26.73:0,27,185	1/1:6,17:25:52.95:489,53,0	1/1:1,13:15:21.77:246,22,0	1/1:5,9:15:20.86:182,21,0	1/1:2,11:13:26.94:251,27,0	1/1:1,8:9:15.02:139,15,0	1/1:7,15:22:36.36:480,36,0	1/1:4,12:16:30.03:279,30,0	1/1:3,25:29:66.86:601,67,0	1/1:3,13:15:33.02:306,33,0	1/1:10,14:26:7.80:381,8,0	1/1:4,14:18:35.86:301,36,0	1/1:2,11:13:21.02:195,21,0	1/1:2,10:13:15.30:264,15,0	1/1:1,13:15:26.86:234,27,0	1/1:3,9:12:21.02:195,21,0	0/1:5,14:20:16.83:276,0,17	1/1:8,17:25:24.46:365,24,0	1/1:5,24:28:39.66:434,40,0	1/1:0,7:7:15.02:139,15,0
chr10	29734867	.	ATG	A	9168.71	PASS	AB=0.861;AC=44;AF=0.846;AN=52;BaseQRankSum=-0.002;DP=772;FS=2.803;HRun=0;HaplotypeScore=226.1183;InbreedingCoeff=0.5702;MQ=60.90;MQ0=7;MQRankSum=2.213;QD=14.02;ReadPosRankSum=-2.042;VQSLOD=4.5466;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:26:2.97:0,3,23	1/1:4,7:11:13.91:234,14,0	./.	./.	1/1:14,7:22:3.09:222,3,0	1/1:13,13:26:21.06:230,21,0	1/1:12,9:21:30.08:331,30,0	0/0:16,0:26:3.45:0,3,23	0/1:13,0:19:8.13:8,0,30	1/1:14,18:32:18.32:641,18,0	1/1:9,12:21:33.07:355,33,0	1/1:14,10:24:21.03:214,21,0	1/1:17,14:31:36.10:398,36,0	1/1:13,18:31:22.29:260,22,0	1/1:14,19:32:27.07:297,27,0	1/1:19,25:44:54.13:587,54,0	0/0:26,0:26:26.97:0,27,254	0/1:24,1:24:11.90:12,0,118	1/1:13,5:17:15.04:166,15,0	1/1:14,15:29:47.96:511,48,0	1/1:28,32:61:99:1105,102,0	1/1:9,21:30:63.16:687,63,0	1/1:10,12:22:33.09:365,33,0	1/1:24,24:48:51.14:564,51,0	1/1:12,20:32:57.15:630,57,0	1/1:14,21:35:63.16:689,63,0	1/1:7,17:23:42.11:464,42,0	1/1:7,7:14:18.05:199,18,0
chr10	29735015	.	A	ATG	4020.92	PASS	AB=0.806;AC=18;AF=0.321;AN=56;BaseQRankSum=4.804;DP=1318;FS=16.361;HRun=0;HaplotypeScore=302.5814;InbreedingCoeff=-0.4939;MQ=41.37;MQ0=6;MQRankSum=-7.106;QD=4.29;ReadPosRankSum=-1.701;VQSLOD=1.3515;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:21,4:23:36.75:38,0,37	0/1:8,7:15:60.85:63,0,61	0/0:41,0:25:58:0,58,742	0/0:47,0:24:55.65:0,56,679	0/0:44,8:52:30.02:0,30,424	0/1:26,16:41:23.08:23,0,299	0/0:34,6:39:1.10:0,1,227	0/1:45,0:41:99:199,0,716	0/1:46,13:58:2.07:2,0,574	0/1:91,24:112:99:1066,0,2459	0/0:25,13:38:8.95:0,9,84	0/1:55,19:72:47.95:48,0,336	0/1:45,10:54:99:227,0,256	0/1:49,19:66:10.69:11,0,365	0/1:51,23:71:44.51:45,0,410	0/1:45,21:66:97.92:98,0,256	0/0:11,1:12:14.89:0,15,176	0/1:13,1:14:44.44:44,0,266	0/1:14,1:14:70.86:71,0,321	0/1:35,17:52:18.72:19,0,286	0/0:32,1:32:3.01:0,3,42	0/1:47,13:60:44.44:44,0,226	0/0:29,9:38:24.04:0,24,298	0/0:31,4:35:12.01:0,12,132	0/0:32,13:45:17.82:0,18,206	0/1:51,32:81:99:1551,0,1422	0/1:31,15:45:99:369,0,500	0/1:18,11:29:99:104,0,378
chr10	29735027	.	GTGTA	G	11936.11	PASS	AB=0.749;AC=25;AF=0.463;AN=54;BaseQRankSum=-2.808;DP=1374;FS=18.364;HRun=0;HaplotypeScore=318.2694;InbreedingCoeff=-0.8618;MQ=39.35;MQ0=12;MQRankSum=-1.944;QD=9.52;ReadPosRankSum=3.824;VQSLOD=2.2340;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:23,6:27:47.87:48,0,180	0/1:11,5:16:36.71:37,0,201	0/0:38,0:21:54.89:0,55,1003	0/0:47,0:21:50.51:0,51,1115	0/1:24,31:55:99:374,0,389	0/1:25,13:37:99:197,0,149	0/1:27,11:37:99:136,0,218	0/1:58,8:59:99:820,0,754	0/1:37,19:55:99:338,0,431	0/1:59,59:115:99:3509,0,2433	./.	0/1:47,28:76:99:510,0,450	0/1:31,26:57:99:423,0,737	0/1:40,28:67:99:482,0,194	0/1:50,26:73:99:188,0,655	0/1:29,33:63:99:216,0,220	0/1:11,1:12:40.68:115,0,41	0/1:13,1:14:99:121,0,179	0/1:13,8:18:99:426,0,333	0/1:29,19:48:91.01:210,0,91	0/1:43,6:47:23.66:24,0,296	0/1:32,27:59:99:129,0,604	0/1:21,20:41:99:310,0,161	0/1:26,15:41:73.37:73,0,239	0/1:22,21:43:58.46:166,0,58	0/1:59,30:87:99:1941,0,2719	0/1:29,18:47:99:675,0,720	0/1:18,11:29:99:468,0,392
chr10	29735047	.	GTA	G	1924.04	PASS	AB=0.818;AC=13;AF=0.232;AN=56;BaseQRankSum=13.745;DP=1451;FS=9.607;HRun=0;HaplotypeScore=359.8802;InbreedingCoeff=-0.2817;MQ=38.46;MQ0=21;MQRankSum=-11.308;QD=2.37;ReadPosRankSum=3.066;VQSLOD=0.5240;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:27,2:27:3.25:3,0,326	0/0:11,5:16:16.30:0,16,268	0/0:25,0:13:32.12:0,32,540	0/0:39,0:15:32.13:0,32,527	0/1:30,19:49:5.80:6,0,652	0/0:29,9:38:21.07:0,21,390	0/0:38,3:40:22.42:0,22,459	0/1:88,3:78:99:175,0,1685	0/0:48,11:58:9.63:0,10,1044	0/1:82,40:120:99:1114,0,2783	0/0:30,12:42:27.09:0,27,488	0/1:66,16:80:54.90:55,0,984	0/1:45,16:60:32.66:33,0,1021	0/1:49,19:66:24.43:24,0,594	0/0:60,18:74:66.17:0,66,1171	0/1:40,25:65:4.39:4,0,611	0/0:13,0:13:14.88:0,15,238	0/0:14,1:15:21.33:0,21,484	0/1:21,3:20:66.92:67,0,626	0/0:39,13:52:8.10:0,8,520	0/0:59,3:59:50.85:0,51,976	0/0:45,21:66:60.20:0,60,1116	0/1:29,13:43:5.81:6,0,576	0/0:41,5:47:48.16:0,48,881	0/0:30,17:46:21.07:0,21,385	0/1:70,19:85:99:452,0,2831	0/1:45,10:55:56.34:56,0,1226	0/1:24,7:31:74.12:74,0,612
chr10	29735057	.	GTA	G	1057.89	PASS	AB=0.813;AC=5;AF=0.089;AN=56;BaseQRankSum=14.376;DP=1413;FS=5.783;HRun=0;HaplotypeScore=350.4086;InbreedingCoeff=-0.0997;MQ=39.10;MQ0=22;MQRankSum=-13.177;QD=3.21;ReadPosRankSum=2.531;VQSLOD=1.3333;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,2:28:20.49:0,20,352	0/0:11,5:16:14.73:0,15,269	0/0:20,0:9:24.08:0,24,418	0/0:29,0:10:21.07:0,21,361	0/0:27,19:46:39.12:0,39,683	0/0:30,9:39:27.07:0,27,439	0/0:35,3:37:26.01:0,26,482	0/0:93,3:80:87.52:0,88,1894	0/0:49,11:59:65.69:0,66,1203	0/1:68,41:107:99:804,0,2777	0/0:28,12:40:30.09:0,30,519	0/1:61,16:77:14.38:14,0,986	0/0:39,16:55:24.48:0,24,1118	0/0:49,19:66:46.86:0,47,825	0/0:58,18:74:75.23:0,75,1302	0/0:46,25:71:56.64:0,57,970	0/0:17,0:17:13.31:0,13,341	0/0:14,1:15:24.68:0,25,465	0/1:19,3:19:26.81:27,0,652	0/0:34,13:47:30.10:0,30,549	0/0:64,3:64:62.51:0,63,1083	0/0:45,21:66:72.21:0,72,1241	0/0:29,13:42:39.12:0,39,684	0/0:39,6:45:57.20:0,57,1027	0/0:31,16:47:30.05:0,30,487	0/1:72,19:84:99:299,0,2734	0/0:42,10:51:30.68:0,31,1394	0/1:23,7:30:30.27:30,0,730
chr10	29735077	.	A	ATG	29156.26	PASS	AB=0.689;AC=45;AF=0.804;AN=56;BaseQRankSum=-14.120;DP=1484;FS=10.233;HRun=0;HaplotypeScore=268.9382;InbreedingCoeff=0.1876;MQ=42.38;MQ0=27;MQRankSum=13.281;QD=20.33;ReadPosRankSum=6.159;VQSLOD=3.8487;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:22,19:38:32.84:536,33,0	1/1:5,12:17:18.06:312,18,0	0/0:17,0:6:9.01:0,9,103	0/0:30,1:10:24.08:0,24,307	1/1:24,19:43:63.22:1083,63,0	1/1:22,14:36:30.10:519,30,0	1/1:25,19:44:50.38:835,50,0	0/1:48,34:69:99:1186,0,360	1/1:27,35:61:80.24:1582,80,0	0/1:69,37:101:99:2186,0,481	1/1:19,17:36:42.14:718,42,0	1/1:37,39:74:54.22:1373,54,0	1/1:22,37:60:52.03:1172,52,0	1/1:40,28:63:68.59:1187,69,0	1/1:47,39:83:99:1886,111,0	1/1:37,35:71:99:1667,100,0	0/1:12,12:23:36.69:513,0,37	0/1:13,14:27:57.21:567,0,57	0/1:18,18:25:99:812,0,163	1/1:25,22:47:66.21:1099,66,0	1/1:40,41:77:82.74:1492,83,0	1/1:31,37:67:99:1711,102,0	1/1:20,24:44:63.22:1063,63,0	1/1:24,32:55:72.22:1208,72,0	1/1:30,20:50:42.61:704,43,0	0/1:54,35:82:99:1846,0,205	1/1:23,24:47:32.90:1045,33,0	0/1:17,17:34:50.66:855,0,51
chr10	29735139	.	GTC	G	137.12	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=7.109;DP=1194;FS=0.897;HRun=0;HaplotypeScore=321.0897;InbreedingCoeff=0.6045;MQ=53.50;MQ0=16;MQRankSum=-4.062;QD=3.26;ReadPosRankSum=-1.318;VQSLOD=1.3853;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,2:34:40.23:0,40,796	0/0:18,0:18:42.11:0,42,744	0/0:67,0:26:63.24:0,63,859	0/0:57,0:22:27.59:0,28,362	0/0:37,0:37:96.28:0,96,1777	0/0:24,0:24:54.14:0,54,978	0/0:21,0:21:41.89:0,42,735	0/0:58,0:54:99:0,144,2368	0/0:53,0:52:99:0,105,1865	0/0:62,0:59:99:0,169,2961	0/0:29,0:29:75.16:0,75,1179	0/0:64,0:62:88.53:0,89,1531	0/0:36,0:36:56.99:0,57,954	0/0:53,0:48:64.04:0,64,1193	0/0:65,0:62:99:0,123,2149	0/0:51,0:50:99:0,102,1602	0/1:21,0:21:45.60:54,0,46	1/1:20,1:21:10.05:181,10,0	0/0:16,0:14:42.05:0,42,590	0/0:46,0:46:99:0,120,2211	0/0:78,0:76:99:0,159,2871	0/0:52,0:51:99:0,129,2232	0/0:39,0:39:99:0,102,1752	0/0:50,2:51:99:0,102,1606	0/0:36,0:36:89.06:0,89,1500	0/0:55,0:52:99:0,150,2557	0/0:31,0:30:62.89:0,63,936	0/0:15,0:14:39.13:0,39,739
chr10	29735141	.	CTG	C	491.74	PASS	AB=0.700;AC=3;AF=0.054;AN=56;BaseQRankSum=4.945;DP=1196;FS=0.000;HRun=0;HaplotypeScore=324.4182;InbreedingCoeff=0.6656;MQ=53.51;MQ0=17;MQRankSum=-3.999;QD=11.71;ReadPosRankSum=-2.956;VQSLOD=2.2598;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,1:35:40.18:0,40,683	0/0:18,0:18:39.13:0,39,655	0/0:69,0:27:52.26:0,52,739	0/0:55,1:21:11.94:0,12,241	0/0:37,0:37:93.29:0,93,1555	0/0:24,0:24:51.15:0,51,857	0/0:22,0:22:38.86:0,39,625	0/0:55,0:51:99:0,117,1820	0/0:52,0:51:95.62:0,96,1585	0/0:63,0:60:99:0,156,2556	0/0:27,0:27:54.18:0,54,895	0/0:62,0:60:80.20:0,80,1272	0/0:37,0:37:44.64:0,45,751	0/0:53,0:48:18.25:0,18,866	0/0:67,0:64:99:0,114,1878	0/0:52,0:51:81.11:0,81,1255	0/1:12,9:21:6.53:156,0,7	1/1:14,7:21:9.47:434,9,0	0/0:16,0:14:30.01:0,30,415	0/0:46,0:46:99:0,117,1960	0/0:77,0:75:99:0,159,2615	0/0:52,0:51:99:0,114,1873	0/0:39,0:39:90.31:0,90,1510	0/0:53,0:52:78.27:0,78,1314	0/0:36,0:36:78.25:0,78,1278	0/0:57,0:54:99:0,129,2130	0/0:31,0:30:45.10:0,45,746	0/0:15,0:14:39.11:0,39,621
chr10	29735260	.	A	ATG	1152.76	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-2.816;DP=1128;FS=18.195;HRun=0;HaplotypeScore=220.4301;InbreedingCoeff=0.9961;MQ=56.58;MQ0=9;MQRankSum=0.867;QD=22.17;ReadPosRankSum=-1.737;VQSLOD=2.4097;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:27,25:50:29.96:1247,30,0	0/0:10,0:11:23.97:0,24,235	0/0:39,0:27:44.85:0,45,523	0/0:37,0:23:44.34:0,44,511	0/0:39,0:40:68.68:0,69,800	0/0:21,0:22:32.79:0,33,353	0/0:32,0:32:63.18:0,63,752	0/0:45,0:43:87.20:0,87,1017	0/0:39,0:39:96.28:0,96,1151	0/0:66,0:66:99:0,156,1831	0/0:41,0:42:65.85:0,66,753	0/0:50,0:50:99:0,117,1381	0/0:36,0:36:81.20:0,81,944	0/0:35,0:35:81.22:0,81,957	0/0:56,0:58:99:0,135,1578	0/0:48,0:48:99:0,114,1370	0/0:38,0:38:77:0,77,888	0/0:26,0:26:62.99:0,63,726	0/0:23,0:20:27.03:0,27,306	0/0:38,0:38:81.16:0,81,981	0/0:83,0:86:99:0,186,2135	0/0:49,0:49:77.97:0,78,945	0/0:32,0:32:56.88:0,57,667	0/0:40,0:40:87.25:0,87,1043	0/0:38,0:39:66:0,66,766	0/0:42,0:43:99:0,99,1158	0/0:39,0:41:83.92:0,84,973	0/0:18,0:19:47.88:0,48,543
chr10	29736114	.	G	GTTTTGT	16454.38	PASS	AB=1.000;AC=49;AF=0.875;AN=56;BaseQRankSum=-5.322;DP=716;FS=0.000;HRun=0;HaplotypeScore=153.7912;InbreedingCoeff=0.7168;MQ=60.38;MQ0=1;MQRankSum=-4.854;QD=25.83;ReadPosRankSum=-2.985;VQSLOD=3.7585;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:35,0:35:21.01:481,21,0	1/1:4,6:11:9.91:287,10,0	0/0:17,0:9:3.01:0,3,49	0/1:29,0:24:7.76:8,0,70	1/1:12,10:23:35.86:680,36,0	1/1:13,20:33:54.18:1560,54,0	1/1:12,10:23:28.65:791,29,0	1/1:40,0:40:24.16:692,24,0	1/1:11,1:22:9.03:221,9,0	1/1:20,14:35:41.91:851,42,0	1/1:14,6:21:20.16:548,20,0	1/1:14,5:19:15.05:439,15,0	1/1:12,6:19:21.07:643,21,0	1/1:9,8:18:18.06:519,18,0	1/1:14,15:30:30.10:924,30,0	1/1:9,12:23:39.12:1123,39,0	0/0:44,0:44:45.87:0,46,289	0/0:18,0:17:10.27:0,10,44	1/1:26,5:32:27:668,27,0	1/1:8,7:16:15.05:454,15,0	1/1:32,0:31:9.03:183,9,0	1/1:10,12:22:35.79:765,36,0	1/1:12,13:27:29.47:713,29,0	1/1:19,12:33:21.04:545,21,0	1/1:10,12:24:18.06:546,18,0	1/1:9,15:25:42.02:1002,42,0	1/1:17,19:36:51.16:1431,51,0	1/1:2,4:7:12.04:381,12,0
chr10	29736143	.	G	GTTTTTGT	10746.87	PASS	AB=0.941;AC=28;AF=0.500;AN=56;BaseQRankSum=3.547;DP=648;FS=18.281;HRun=0;HaplotypeScore=148.7675;InbreedingCoeff=-0.8264;MQ=57.95;MQ0=7;MQRankSum=-7.520;QD=17.03;ReadPosRankSum=2.673;VQSLOD=3.2157;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:12,22:37:28.05:827,0,28	0/1:11,0:11:27.22:245,0,27	0/0:16,0:10:29.90:0,30,267	0/1:23,0:14:0.11:0,0,111	0/1:20,0:21:57.52:444,0,58	0/1:35,0:35:99:976,0,193	0/1:20,0:20:99:444,0,172	0/1:26,0:28:99:234,0,139	0/1:15,0:15:99:139,0,210	0/1:32,0:31:99:513,0,248	0/1:22,0:23:99:369,0,196	0/1:11,0:11:55.76:215,0,56	0/1:19,0:19:99:361,0,133	0/1:16,0:16:95.78:268,0,96	0/1:19,1:20:62.44:570,0,62	0/1:20,0:21:71.85:796,0,72	0/1:8,0:43:27.08:27,0,343	0/1:6,0:20:34.66:35,0,36	0/1:24,0:23:99:266,0,215	0/1:21,0:22:99:277,0,254	0/1:20,0:19:99:241,0,137	0/1:26,0:26:99:413,0,232	0/1:28,0:28:99:417,0,233	0/1:29,0:29:99:110,0,187	0/1:17,0:18:43.83:499,0,44	0/1:25,0:26:84.03:996,0,84	0/1:33,0:35:99:782,0,205	1/1:5,0:5:12.04:282,12,0
chr10	29736655	.	A	AG	221.50	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-3.205;DP=447;FS=5.943;HRun=1;HaplotypeScore=43.6760;InbreedingCoeff=0.9033;MQ=74.39;MQ0=0;MQRankSum=-0.906;QD=24.61;ReadPosRankSum=0.859;VQSLOD=3.3260;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:57.17:0,57,724	0/0:3,0:3:9:0,9,98	0/0:12,0:10:29.94:0,30,312	0/0:18,0:17:47.45:0,47,481	0/0:24,0:24:60.12:0,60,683	0/0:21,0:21:63.18:0,63,777	0/0:16,0:16:42.09:0,42,489	0/0:34,0:34:93.25:0,93,1106	1/1:1,8:9:21.07:314,21,0	0/0:15,0:15:45.13:0,45,561	0/0:19,0:19:54.14:0,54,651	0/0:10,0:10:30.08:0,30,374	0/0:11,0:11:33.11:0,33,427	0/0:14,0:14:42.13:0,42,534	0/0:13,0:13:36.11:0,36,455	0/0:8,0:8:24.08:0,24,311	0/0:26,0:26:74.88:0,75,912	0/0:25,0:25:69.22:0,69,891	0/0:15,0:15:45.12:0,45,546	0/0:22,0:22:57.16:0,57,714	0/0:6,0:6:18.05:0,18,220	0/0:6,0:6:15.04:0,15,182	0/0:17,0:17:45.14:0,45,568	0/0:11,0:11:33.11:0,33,427	0/0:5,0:5:15.03:0,15,179	0/0:31,0:31:93.25:0,93,1131	0/0:20,0:20:60.17:0,60,749	0/0:15,0:15:39.07:0,39,472
chr10	29736917	.	TTG	T	5280.27	PASS	AB=0.659;AC=48;AF=0.857;AN=56;BaseQRankSum=-2.878;DP=537;FS=0.000;HRun=0;HaplotypeScore=88.2528;InbreedingCoeff=0.5352;MQ=65.75;MQ0=13;MQRankSum=1.967;QD=12.91;ReadPosRankSum=4.006;VQSLOD=4.5556;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,28:37:4.43:198,4,0	1/1:0,6:6:6.02:73,6,0	0/0:57,0:27:26.53:0,27,355	0/0:41,0:21:17.73:0,18,243	1/1:4,12:16:17.37:201,17,0	1/1:3,13:16:21.07:256,21,0	1/1:13,4:17:35.82:440,36,0	0/1:15,11:27:0.17:358,0,0	1/1:3,10:14:11.87:124,12,0	1/1:6,15:21:44.87:496,45,0	1/1:5,12:17:5.68:73,6,0	1/1:6,7:13:3.01:37,3,0	1/1:5,3:8:18.06:220,18,0	1/1:12,1:13:16.12:187,16,0	1/1:2,12:15:2.69:36,3,0	1/1:2,8:10:6.02:73,6,0	1/1:16,4:19:13.34:437,13,0	0/1:5,9:15:1.54:102,0,2	1/1:11,12:23:37.49:451,37,0	1/1:6,20:26:38.50:475,39,0	1/1:3,12:15:12.04:147,12,0	1/1:2,6:8:9.03:110,9,0	1/1:6,14:19:11.64:146,12,0	0/0:5,25:30:7.90:0,8,65	1/1:2,9:11:6.02:73,6,0	1/1:3,9:11:27.07:318,27,0	1/1:2,10:13:11.66:138,12,0	1/1:3,12:15:9.03:110,9,0
chr10	29736934	.	TGC	T	2123.57	PASS	AB=0.985;AC=42;AF=0.750;AN=56;BaseQRankSum=2.177;DP=480;FS=25.476;HRun=0;HaplotypeScore=96.3659;InbreedingCoeff=0.0206;MQ=55.30;MQ0=13;MQRankSum=5.208;QD=5.12;ReadPosRankSum=4.629;VQSLOD=0.6495;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:32,0:32:25.98:66,0,26	1/1:6,0:6:5.92:38,6,0	0/0:40,0:10:20.76:0,21,262	0/0:24,0:6:14.64:0,15,194	1/1:15,0:15:17.27:94,17,0	1/1:16,0:16:20.01:113,20,0	1/1:17,0:16:33.21:149,33,0	0/1:19,0:19:60.29:110,0,60	1/1:16,0:16:2.87:65,3,0	0/1:18,0:18:4:144,0,4	1/1:13,0:13:5.86:34,6,0	0/1:10,1:11:6.08:15,0,6	1/1:10,0:10:8.04:119,8,0	1/1:9,1:10:16.62:72,17,0	1/1:16,1:17:3.39:18,3,0	0/1:11,0:11:9.63:26,0,10	1/1:23,0:21:25.15:205,25,0	1/1:15,0:15:0.32:80,0,0	1/1:15,1:16:14.98:219,15,0	1/1:23,0:23:38.18:251,38,0	1/1:15,0:13:11.37:59,11,0	0/1:9,0:9:6.54:29,0,7	0/1:18,0:17:3.45:48,0,3	0/1:38,0:37:40.53:43,0,41	0/1:11,0:10:12.21:20,0,12	1/1:10,0:9:22.38:115,22,0	0/1:12,1:13:5.63:76,0,6	1/1:13,0:13:11.76:71,12,0
chr10	29736939	.	G	GGAGAGAGA	2020.67	PASS	AB=0.961;AC=40;AF=0.769;AN=52;BaseQRankSum=0.141;DP=499;FS=33.832;HRun=0;HaplotypeScore=140.1065;InbreedingCoeff=0.0808;MQ=51.78;MQ0=13;MQRankSum=-1.792;QD=5.14;ReadPosRankSum=-1.479;VQSLOD=1.1501;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:31,0:31:65.98:80,0,66	1/1:6,0:6:5.18:26,5,0	./.	./.	0/0:15,0:15:0:0,0,0	1/1:20,0:20:2.99:24,3,0	1/1:17,0:17:6.47:103,6,0	1/1:22,0:22:3.90:45,4,0	0/0:17,0:17:11.45:0,11,217	1/1:18,0:18:23.15:389,23,0	1/1:15,0:15:3:25,3,0	1/1:11,0:12:0.47:1,0,0	0/1:12,0:14:7.56:416,0,8	1/1:7,4:12:8.99:227,9,0	1/1:14,0:16:3.01:68,3,0	1/1:10,0:12:3.01:48,3,0	1/1:18,0:19:17.91:293,18,0	0/1:14,0:15:26.68:36,0,27	1/1:18,0:18:5.86:39,6,0	1/1:22,0:22:0.47:1,0,0	1/1:17,0:15:5.99:50,6,0	0/1:12,0:12:0:0,0,0	0/0:20,0:19:0:0,0,0	0/1:38,0:39:99:115,0,132	0/1:11,0:10:18.98:19,0,68	1/1:12,0:10:5.97:47,6,0	1/1:16,0:16:7.03:28,7,0	1/1:12,0:12:5.05:64,5,0
chr10	29739113	.	GCACA	G	6666.26	PASS	AC=52;AF=0.963;AN=54;BaseQRankSum=-1.357;DP=541;FS=0.000;HRun=0;HaplotypeScore=111.1101;InbreedingCoeff=0.2318;MQ=60.47;MQ0=19;MQRankSum=0.154;QD=13.95;ReadPosRankSum=2.404;VQSLOD=4.2747;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:31:12.01:111,12,0	1/1:4,4:8:12.03:169,12,0	0/0:36,0:13:0.47:0,0,1	./.	1/1:9,8:20:2.61:288,3,0	1/1:4,6:10:12.04:173,12,0	1/1:11,7:18:12.04:188,12,0	1/1:20,0:18:7.18:83,7,0	1/1:9,11:22:20.55:440,21,0	1/1:15,1:15:20.99:225,21,0	1/1:7,2:11:9.91:123,10,0	1/1:3,7:11:17.52:282,18,0	1/1:7,7:14:17.74:282,18,0	1/1:13,0:24:23.73:276,24,0	1/1:10,9:22:30.08:412,30,0	1/1:6,7:14:26.30:383,26,0	1/1:10,17:26:19.25:489,19,0	1/1:9,12:20:15.05:235,15,0	1/1:8,3:10:12.03:161,12,0	1/1:7,6:13:12:161,12,0	1/1:30,4:35:18.75:238,19,0	1/1:5,9:14:6.49:95,6,0	1/1:6,8:14:12.45:170,12,0	1/1:17,19:36:23.15:633,23,0	1/1:7,3:11:6.01:75,6,0	1/1:10,9:20:30.08:413,30,0	1/1:11,9:21:29.84:420,30,0	1/1:4,3:7:9.03:141,9,0
chr10	29740930	.	G	GC	19170.98	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=3.615;DP=582;FS=0.561;HRun=0;HaplotypeScore=94.6272;InbreedingCoeff=0.9901;MQ=91.55;MQ0=0;MQRankSum=-10.786;QD=35.83;ReadPosRankSum=7.468;VQSLOD=3.7926;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,16:18:40.03:562,40,0	1/1:0,5:5:15.05:203,15,0	0/0:22,0:22:63.20:0,63,863	0/0:25,0:25:72.21:0,72,965	1/1:1,31:32:85.74:1138,86,0	1/1:1,22:23:58.54:798,59,0	1/1:2,13:15:38.73:520,39,0	1/1:4,20:24:68.94:892,69,0	1/1:1,12:13:32.15:440,32,0	1/1:1,28:29:87.23:1148,87,0	1/1:0,23:23:64.44:848,64,0	1/1:0,12:12:33.11:436,33,0	1/1:2,18:20:48.16:641,48,0	1/1:1,24:25:63.19:833,63,0	1/1:0,14:14:42.14:551,42,0	1/1:1,16:17:48.16:632,48,0	1/1:1,20:21:51.17:677,51,0	1/1:2,12:14:36.12:478,36,0	1/1:2,29:31:87.67:1101,88,0	1/1:3,33:36:99:1371,106,0	1/1:1,11:12:33.11:437,33,0	1/1:0,18:18:48.16:642,48,0	1/1:2,30:32:90.28:1205,90,0	1/1:1,25:26:76.80:1008,77,0	1/1:1,13:14:23.58:418,24,0	1/1:0,13:13:39.11:508,39,0	1/1:3,33:35:96.13:1205,96,0	1/1:0,12:12:36.12:478,36,0
chr10	29741488	.	AACACAC	A	380.36	PASS	AB=0.918;AC=4;AF=0.091;AN=44;BaseQRankSum=1.765;DP=428;FS=0.000;HRun=0;HaplotypeScore=105.0330;InbreedingCoeff=0.1498;MQ=52.20;MQ0=18;MQRankSum=-0.790;QD=4.75;ReadPosRankSum=0.507;VQSLOD=1.5896;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:24:6.02:84,6,0	./.	./.	./.	0/0:13,0:13:11.91:0,12,277	0/0:12,0:12:9.03:0,9,229	0/0:24,0:22:24.08:0,24,604	0/0:21,0:20:5.81:0,6,44	./.	0/0:6,0:6:3.01:0,3,65	./.	0/0:14,0:14:15.05:0,15,309	0/0:13,0:14:17.77:0,18,429	0/0:16,0:16:3.01:0,3,42	0/0:12,0:12:9.03:0,9,234	0/0:15,0:15:2.80:0,3,83	0/1:30,2:33:38.50:284,0,38	0/1:21,2:22:23.81:112,0,24	./.	0/0:7,0:7:0:0,0,0	0/0:23,0:22:12.04:0,12,289	0/0:10,0:10:9.48:0,9,183	0/0:10,0:9:3.01:0,3,63	0/0:17,0:19:20.20:0,20,482	0/0:8,0:9:8.92:0,9,125	0/0:9,0:9:3.48:0,3,97	0/0:14,0:14:16.18:0,16,382	0/0:5,0:4:3.01:0,3,58
chr10	29744204	.	CGTGTGTGTGTGTGT	C	5925.41	PASS	AB=0.900;AC=43;AF=0.860;AN=50;BaseQRankSum=4.352;DP=575;FS=2.883;HRun=0;HaplotypeScore=206.4179;InbreedingCoeff=0.4536;MQ=67.38;MQ0=5;MQRankSum=-2.413;QD=13.05;ReadPosRankSum=0.179;VQSLOD=3.9990;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:34:3.01:34,3,0	./.	./.	./.	1/1:10,0:10:3:27,3,0	1/1:15,0:15:14.95:123,15,0	1/1:20,0:20:6:53,6,0	1/1:26,0:25:3.49:78,3,0	0/0:13,0:13:33.11:0,33,1927	1/1:20,6:26:3.48:118,3,0	1/1:17,0:17:6:54,6,0	1/1:14,4:18:9.03:350,9,0	1/1:15,8:24:12.04:448,12,0	1/1:8,6:14:8.06:180,8,0	1/1:8,9:16:15.05:584,15,0	1/1:9,5:15:12.04:448,12,0	0/0:19,0:25:11.22:0,11,465	0/0:20,0:24:18.06:0,18,575	1/1:18,3:21:7.71:277,8,0	1/1:14,6:20:12.04:428,12,0	1/1:22,0:22:6.89:55,7,0	1/1:7,11:19:20.97:604,21,0	1/1:13,6:19:3.48:118,3,0	1/1:17,12:29:2.97:20,3,0	0/1:16,0:18:5.66:214,0,6	1/1:20,7:26:2.67:331,3,0	1/1:15,18:32:26.97:1051,27,0	1/1:7,2:10:9.03:331,9,0
chr10	29746529	.	CTCTT	C	1162.93	PASS	AB=0.994;AC=25;AF=0.446;AN=56;BaseQRankSum=-2.910;DP=458;FS=14.120;HRun=0;HaplotypeScore=112.3217;InbreedingCoeff=-0.1419;MQ=38.45;MQ0=25;MQRankSum=2.382;QD=3.51;ReadPosRankSum=4.163;VQSLOD=1.2941;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:23:1.30:93,1,0	0/0:12,0:10:7.57:0,8,35	0/0:20,0:6:14.94:0,15,121	0/0:37,0:3:8.89:0,9,73	0/1:12,0:12:15.68:17,0,16	0/1:19,0:18:4.92:5,0,12	0/1:17,0:17:16.98:33,0,17	1/1:19,0:16:13.24:241,13,0	0/1:17,0:14:23.31:23,0,93	0/1:17,0:16:39.30:59,0,39	0/0:12,0:11:2.12:0,2,34	1/1:7,0:7:2.78:8,3,0	0/1:11,0:11:7.21:7,0,11	0/1:18,0:16:20.53:34,0,21	0/0:10,0:9:5.03:0,5,19	1/1:12,2:14:8.71:97,9,0	0/1:18,2:19:6.06:131,0,6	1/1:11,1:12:14.71:155,15,0	0/1:12,0:11:15.82:144,0,16	0/1:12,0:10:7.67:8,0,8	0/0:13,0:11:9.03:0,9,47	0/1:17,0:17:3.19:21,0,3	0/1:20,0:20:10.99:11,0,62	0/1:17,0:14:10.61:11,0,22	0/0:14,1:15:9.42:0,9,59	0/1:26,0:23:48.02:194,0,48	0/1:20,0:19:23.45:30,0,23	0/0:8,0:7:2.84:0,3,14
chr10	29746553	.	CTG	C	759.86	PASS	AB=0.975;AC=30;AF=0.536;AN=56;BaseQRankSum=-2.512;DP=509;FS=0.000;HRun=0;HaplotypeScore=116.2123;InbreedingCoeff=-0.1158;MQ=40.68;MQ0=28;MQRankSum=-0.341;QD=2.01;ReadPosRankSum=-2.042;VQSLOD=1.7215;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:29,1:29:18.99:38,0,19	1/1:10,0:8:6.30:35,6,0	0/0:24,0:7:10.75:0,11,179	0/0:39,0:3:5.98:0,6,78	0/1:15,0:15:16.81:17,0,24	0/1:17,0:16:1.01:26,0,1	0/0:19,0:19:3:0,3,57	0/1:22,0:18:1.11:1,0,173	0/0:17,0:15:17.88:0,18,242	0/1:12,1:12:83.73:90,0,84	0/0:12,0:11:4.24:0,4,27	1/1:12,0:12:5.19:21,5,0	1/1:13,0:13:5.17:31,5,0	0/1:18,0:16:4.97:50,0,5	0/1:18,0:17:13.20:13,0,38	0/1:17,0:17:14.57:46,0,15	0/0:19,1:18:17.88:0,18,195	0/1:12,0:11:18.52:19,0,122	0/1:9,3:12:18.46:187,0,18	0/1:17,0:16:11.50:11,0,12	1/1:13,0:8:5.49:38,5,0	0/1:22,1:24:10.13:73,0,10	0/1:22,0:22:19.13:19,0,50	1/1:18,0:17:2.68:8,3,0	1/1:20,0:20:2.77:19,3,0	0/1:31,0:27:99:124,0,212	1/1:19,0:16:3.53:19,4,0	1/1:5,0:5:3.01:32,3,0
chr10	29746555	.	G	GTCTC	4634.22	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-1.693;DP=530;FS=10.954;HRun=0;HaplotypeScore=120.5937;InbreedingCoeff=0.3381;MQ=42.71;MQ0=27;MQRankSum=0.524;QD=10.21;ReadPosRankSum=0.707;VQSLOD=3.7762;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:13,16:29:11.05:199,11,0	1/1:4,7:9:9.03:220,9,0	0/0:24,0:7:5.50:0,6,48	0/0:35,0:2:3.01:0,3,52	1/1:4,10:18:5.88:80,6,0	1/1:3,13:16:5.85:55,6,0	1/1:4,14:19:2.97:20,3,0	1/1:25,0:21:21.66:156,22,0	0/0:17,0:15:1.53:0,2,26	1/1:14,0:13:26.76:291,27,0	1/1:4,8:13:6.02:150,6,0	1/1:2,9:12:5.40:84,5,0	1/1:5,7:13:2.91:72,3,0	1/1:7,11:16:2.90:75,3,0	1/1:5,13:17:6.49:116,6,0	1/1:4,12:19:18.01:343,18,0	1/1:9,0:18:28.90:382,29,0	1/1:8,0:9:18.11:181,18,0	1/1:12,0:12:24.30:300,24,0	1/1:6,12:20:6.96:152,7,0	1/1:9,3:7:2.75:75,3,0	1/1:9,14:26:19.88:332,20,0	1/1:5,15:22:9.02:191,9,0	1/1:8,11:19:6.11:151,6,0	1/1:4,17:22:2.86:76,3,0	1/1:8,22:29:63.40:806,63,0	1/1:8,12:17:3.01:73,3,0	1/1:3,3:7:3.01:51,3,0
chr10	29746565	.	CTGTG	C	553.97	PASS	AB=0.977;AC=15;AF=0.268;AN=56;BaseQRankSum=-1.820;DP=525;FS=17.581;HRun=0;HaplotypeScore=125.8615;InbreedingCoeff=-0.2250;MQ=44.95;MQ0=22;MQRankSum=3.238;QD=1.98;ReadPosRankSum=-2.326;VQSLOD=1.0468;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:4.02:0,4,61	0/0:10,0:8:9:0,9,92	0/0:17,0:8:6.02:0,6,77	0/0:18,0:3:1.55:0,2,4	0/1:20,1:21:7.12:7,0,14	1/1:15,1:15:9.03:122,9,0	0/0:18,0:18:2.57:0,3,28	0/1:29,0:25:22.17:22,0,189	0/1:15,0:16:20.82:21,0,110	0/1:16,0:15:65.41:65,0,143	0/1:18,0:16:6.17:6,0,48	0/1:12,0:12:3.79:32,0,4	0/0:14,1:15:5.38:0,5,35	0/1:17,0:15:8.98:9,0,29	0/0:17,0:16:8.88:0,9,59	0/1:19,0:19:25.78:26,0,181	0/1:20,0:18:40.39:78,0,40	0/1:10,2:11:7.60:214,0,8	0/0:16,0:13:13.81:0,14,64	0/1:21,0:20:10.24:10,0,59	0/0:12,0:6:3.01:0,3,32	0/1:28,0:28:71.40:71,0,148	0/0:25,0:25:10.66:0,11,109	0/0:20,0:19:9.20:0,9,90	0/0:20,1:21:4.25:0,4,38	0/1:34,0:30:15.65:16,0,202	0/0:18,0:15:5.95:0,6,43	0/0:7,0:7:2.80:0,3,13
chr10	29746967	.	G	GT	632.09	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-1.465;DP=745;FS=1.664;HRun=9;HaplotypeScore=95.1831;InbreedingCoeff=0.9561;MQ=76.88;MQ0=0;MQRankSum=1.035;QD=21.80;ReadPosRankSum=-0.203;VQSLOD=3.7868;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,141,1219	0/0:10,0:10:23.99:0,24,208	0/0:19,0:19:11.39:0,11,230	0/0:23,0:22:35.69:0,36,303	0/0:32,0:32:79.15:0,79,681	0/0:29,0:29:77.96:0,78,675	0/0:28,0:28:74.98:0,75,651	0/0:35,0:35:83.96:0,84,727	1/1:4,25:29:66.18:727,66,0	0/0:35,0:35:92.96:0,93,805	0/0:25,0:25:62.97:0,63,547	0/0:24,0:24:53.96:0,54,465	0/0:18,0:18:44.98:0,45,391	0/0:31,0:31:80.90:0,81,690	0/0:29,0:29:80.88:0,81,684	0/0:30,0:30:83.95:0,84,723	0/0:45,0:45:99:0,126,1089	0/0:12,0:12:32.95:0,33,277	0/0:24,0:24:68.95:0,69,591	0/0:33,0:33:89.97:0,90,779	0/0:19,0:19:50.98:0,51,440	0/0:31,0:31:86.98:0,87,755	0/0:23,0:23:65.93:0,66,563	0/0:17,0:17:50.86:0,51,422	0/0:22,0:22:53.97:0,54,469	0/0:31,0:31:80.94:0,81,697	0/0:30,0:30:83.96:0,84,725	0/0:9,0:9:17.99:0,18,156
chr10	29747996	.	A	AG	5230.40	PASS	AB=0.890;AC=39;AF=0.696;AN=56;BaseQRankSum=-9.071;DP=623;FS=184.803;HRun=0;HaplotypeScore=65.9572;InbreedingCoeff=0.0124;MQ=58.50;MQ0=18;MQRankSum=4.913;QD=9.39;ReadPosRankSum=6.247;VQSLOD=1.4730;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:20,2:38:16.91:17,0,177	1/1:8,1:9:9.03:109,9,0	0/0:24,0:9:10.05:0,10,175	0/0:20,0:8:3.46:0,3,137	1/1:29,0:28:30.90:282,31,0	1/1:30,0:26:18.63:315,19,0	0/1:31,0:30:27.99:306,0,28	1/1:30,0:30:18.16:437,18,0	0/0:22,0:21:48.86:0,49,221	1/1:7,19:23:59.17:451,59,0	1/1:20,0:20:2:268,2,0	1/1:16,0:16:11.99:239,12,0	0/1:8,0:18:3.53:4,0,64	0/1:18,1:19:42.35:177,0,42	0/1:12,0:12:44.13:70,0,44	0/1:20,0:20:48.97:168,0,49	0/1:21,0:21:25.86:131,0,26	0/1:17,0:16:30.10:117,0,30	0/1:31,1:30:13.53:311,0,14	1/1:21,1:22:39.79:318,40,0	1/1:3,14:17:2.97:29,3,0	1/1:9,0:9:12.88:89,13,0	1/1:15,1:16:10.45:198,10,0	0/1:33,1:34:9.64:297,0,10	1/1:18,0:17:14.04:279,14,0	1/1:3,22:25:29.71:434,30,0	0/1:11,26:37:24.55:25,0,46	1/1:10,0:10:24.10:160,24,0
chr10	29748284	.	GCTCT	G	11624.54	PASS	AB=0.604;AC=50;AF=0.893;AN=56;BaseQRankSum=-4.684;DP=553;FS=19.270;HRun=0;HaplotypeScore=101.1795;InbreedingCoeff=0.5593;MQ=73.96;MQ0=11;MQRankSum=-0.170;QD=24.17;ReadPosRankSum=3.433;VQSLOD=3.3721;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:10,22:31:48.16:786,48,0	1/1:2,1:2:3.01:49,3,0	0/0:39,0:22:26.30:0,26,464	0/0:33,0:20:12.02:0,12,171	1/1:7,14:22:15.32:485,15,0	1/1:9,14:23:27.09:431,27,0	1/1:2,12:15:24.07:360,24,0	1/1:15,13:29:29.26:577,29,0	0/1:5,0:14:15.21:15,0,164	1/1:7,15:24:57.18:884,57,0	1/1:3,12:15:24.04:392,24,0	1/1:4,13:18:33.11:519,33,0	1/1:6,8:16:30.02:418,30,0	1/1:6,7:13:15.05:246,15,0	1/1:10,11:22:36.12:559,36,0	1/1:4,14:17:30.10:492,30,0	1/1:7,11:19:30.09:470,30,0	0/1:2,3:5:26.25:160,0,26	1/1:15,8:23:24.04:345,24,0	1/1:7,13:21:39.12:606,39,0	1/1:8,8:16:21.07:344,21,0	1/1:3,11:14:27.09:421,27,0	1/1:8,9:17:24.08:368,24,0	1/1:6,18:25:54.18:863,54,0	1/1:17,14:31:30.10:481,30,0	1/1:8,13:21:42.14:667,42,0	1/1:5,11:16:29.87:491,30,0	1/1:1,4:5:12.04:197,12,0
chr10	29749523	.	AT	A	9074.27	PASS	AB=0.811;AC=52;AF=0.929;AN=56;BaseQRankSum=-5.339;DP=611;FS=2.731;HRun=12;HaplotypeScore=75.4649;InbreedingCoeff=0.5987;MQ=84.39;MQ0=0;MQRankSum=-4.969;QD=15.70;ReadPosRankSum=4.988;VQSLOD=5.7810;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,25:32:79.34:596,79,0	1/1:2,12:15:34.91:261,35,0	0/0:32,1:31:23.50:0,24,348	0/1:20,1:18:2.15:2,0,78	1/1:7,21:28:26.16:379,26,0	1/1:2,18:20:50.80:395,51,0	1/1:6,18:24:44.80:348,45,0	1/1:10,27:37:58.30:601,58,0	1/1:3,15:18:41.82:325,42,0	1/1:4,14:19:40.86:308,41,0	1/1:2,14:17:40.86:308,41,0	1/1:2,11:13:26.88:209,27,0	1/1:6,14:20:41.78:325,42,0	1/1:0,13:14:37.90:284,38,0	1/1:5,22:28:55.78:424,56,0	1/1:2,16:18:47.81:372,48,0	1/1:6,17:23:41.79:325,42,0	1/1:0,17:18:49.85:377,50,0	1/1:10,18:29:25.32:369,25,0	0/1:12,12:24:16.21:248,0,16	1/1:3,15:18:44.81:348,45,0	1/1:1,18:21:54.86:406,55,0	1/1:5,19:25:55.82:424,56,0	1/1:2,18:20:44.80:348,45,0	1/1:2,12:15:28.93:215,29,0	1/1:7,13:20:35.78:279,36,0	1/1:5,22:28:52.82:400,53,0	1/1:3,8:13:27.97:198,28,0
chr10	29749660	.	AT	A	10547.78	PASS	AB=0.583;AC=45;AF=0.804;AN=56;BaseQRankSum=1.776;DP=664;FS=1.333;HRun=11;HaplotypeScore=85.1026;InbreedingCoeff=0.8379;MQ=75.40;MQ0=0;MQRankSum=-1.621;QD=19.11;ReadPosRankSum=3.374;VQSLOD=5.6932;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,121,1247	0/1:2,4:7:14.96:87,0,15	0/0:15,0:15:6.52:0,7,222	0/0:13,0:13:6.18:0,6,156	1/1:4,22:26:62.91:517,63,0	1/1:4,13:17:32.94:271,33,0	1/1:3,18:21:53.93:443,54,0	1/1:3,24:27:65.89:538,66,0	1/1:6,25:31:55.13:571,55,0	1/1:3,18:21:47.89:391,48,0	1/1:2,16:18:47.94:394,48,0	1/1:4,12:16:35.95:296,36,0	1/1:4,19:23:50.91:419,51,0	1/1:3,11:14:32.93:271,33,0	1/1:5,25:30:68.91:567,69,0	1/1:3,30:34:85.73:695,86,0	0/0:15,1:16:20.47:0,20,423	0/0:22,0:22:63.08:0,63,656	1/1:4,16:20:47.94:394,48,0	1/1:1,32:33:86.87:714,87,0	1/1:5,23:30:66.04:510,66,0	1/1:4,15:19:38.93:320,39,0	1/1:2,23:25:65.91:542,66,0	1/1:7,26:35:78.96:628,79,0	1/1:2,28:31:82.92:671,83,0	1/1:7,20:27:34.16:436,34,0	1/1:8,24:32:13.93:527,14,0	1/1:0,15:15:41.95:345,42,0
chr10	29751328	.	C	CGAGA	2231.72	PASS	AB=0.937;AC=42;AF=0.808;AN=52;BaseQRankSum=0.512;DP=683;FS=21.419;HRun=0;HaplotypeScore=139.9771;InbreedingCoeff=0.3586;MQ=61.62;MQ0=21;MQRankSum=-1.595;QD=3.96;ReadPosRankSum=-1.390;VQSLOD=0.8555;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:43,0:43:21.05:335,21,0	1/1:11,0:11:5.96:43,6,0	./.	0/1:57,0:21:0.44:0,0,0	./.	0/0:16,0:16:2.74:0,3,46	0/1:34,0:36:3.54:4,0,296	1/1:32,0:32:3.01:59,3,0	1/1:36,0:34:18.03:293,18,0	1/1:24,0:24:12.83:170,13,0	1/1:17,0:17:6.02:120,6,0	1/1:18,2:21:9.50:161,10,0	1/1:18,0:18:12.04:169,12,0	1/1:18,0:18:5.85:79,6,0	1/1:25,1:34:6.02:93,6,0	0/1:17,0:24:16.89:17,0,37	0/0:23,0:24:15.03:0,15,194	1/1:16,0:14:8.93:88,9,0	1/1:26,0:26:12.04:196,12,0	1/1:22,0:22:3:43,3,0	1/1:22,0:22:6.02:123,6,0	0/0:12,0:12:6.02:0,6,93	1/1:8,0:8:3.01:54,3,0	1/1:23,5:29:6.02:113,6,0	1/1:14,0:14:9.02:134,9,0	1/1:15,0:15:4.26:46,4,0	0/1:24,0:24:0:0,0,0	1/1:15,0:15:2.99:24,3,0
chr10	29751778	.	T	TA	10731.39	PASS	AB=0.660;AC=46;AF=0.821;AN=56;BaseQRankSum=-6.831;DP=551;FS=1.281;HRun=11;HaplotypeScore=63.8293;InbreedingCoeff=0.2301;MQ=75.38;MQ0=2;MQRankSum=-2.577;QD=20.56;ReadPosRankSum=2.722;VQSLOD=5.8302;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,42:44:99:1180,117,0	0/1:1,9:10:2.18:162,0,2	0/1:18,0:17:10.97:11,0,72	0/0:13,0:9:4.34:0,4,79	1/1:4,16:20:25.99:375,26,0	0/1:4,12:16:50.84:263,0,51	1/1:1,13:15:6.66:235,7,0	0/1:9,8:18:13.30:240,0,13	0/0:16,0:16:38.82:0,39,302	1/1:4,18:22:33.78:498,34,0	1/1:3,25:28:68.89:651,69,0	0/1:4,17:21:1.31:351,0,1	1/1:1,18:19:42.08:426,42,0	1/1:0,13:13:39.04:385,39,0	1/1:4,17:20:48.10:487,48,0	1/1:2,12:14:30.06:305,30,0	1/1:0,18:18:45.09:457,45,0	1/1:1,26:26:66.13:670,66,0	0/1:7,9:16:13.41:225,0,13	1/1:4,20:25:42.63:577,43,0	1/1:2,11:13:21.04:213,21,0	1/1:7,12:19:1.62:377,2,0	1/1:4,17:21:48.57:488,49,0	1/1:0,11:12:32.90:319,33,0	1/1:4,26:29:72.14:731,72,0	1/1:5,23:28:26.09:624,26,0	1/1:9,17:27:3.79:362,4,0	1/1:2,5:7:12.02:122,12,0
chr10	29752193	.	A	ATCTC	3026.15	PASS	AB=0.937;AC=42;AF=0.808;AN=52;BaseQRankSum=-1.464;DP=623;FS=34.243;HRun=0;HaplotypeScore=127.0524;InbreedingCoeff=0.1452;MQ=62.50;MQ0=7;MQRankSum=1.221;QD=5.73;ReadPosRankSum=-2.367;VQSLOD=0.7683;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:25:14.57:170,15,0	1/1:11,0:11:5.03:31,5,0	./.	./.	0/1:23,0:23:7.74:8,0,50	0/0:25,0:25:7.27:0,7,54	1/1:14,6:22:12.04:224,12,0	1/1:51,0:50:0.94:2,1,0	0/0:19,0:19:23.61:0,24,224	0/1:24,0:24:42.86:58,0,43	1/1:16,0:16:1.38:9,1,0	1/1:5,4:12:2.90:71,3,0	0/1:22,0:22:73.11:113,0,73	1/1:10,6:21:8.62:144,9,0	0/1:24,0:34:3.10:3,0,53	0/1:14,3:17:57.84:58,0,79	1/1:26,0:25:12.04:182,12,0	1/1:17,0:17:24.54:363,25,0	1/1:15,0:15:6.48:67,6,0	0/1:17,0:16:17.04:17,0,19	1/1:22,0:22:8.91:64,9,0	1/1:14,0:14:5.38:88,5,0	1/1:19,0:19:20.67:265,21,0	1/1:8,6:16:0.29:71,0,0	1/1:31,0:31:2.95:354,3,0	1/1:33,0:33:6.34:326,6,0	1/1:26,0:26:16.85:208,17,0	1/1:14,0:14:18.04:276,18,0
chr10	29752412	.	T	TAC	760.95	PASS	AB=0.891;AC=5;AF=0.089;AN=56;BaseQRankSum=-3.293;DP=866;FS=0.783;HRun=0;HaplotypeScore=102.2309;InbreedingCoeff=0.2685;MQ=56.29;MQ0=17;MQRankSum=0.294;QD=4.61;ReadPosRankSum=0.801;VQSLOD=2.6642;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:21,16:38:37.24:356,0,37	0/0:18,0:18:41.79:0,42,467	0/1:53,1:18:20.26:20,0,52	0/1:42,0:16:2.98:3,0,46	0/0:23,0:24:44.79:0,45,483	0/0:29,0:29:63.17:0,63,726	0/0:18,0:18:33.06:0,33,364	0/0:44,0:44:66.13:0,66,713	1/1:11,19:31:3.94:487,4,0	0/0:40,0:40:92.67:0,93,1052	0/0:27,0:27:48.14:0,48,561	0/0:27,0:27:66.18:0,66,760	0/0:19,0:19:30.09:0,30,351	0/0:28,0:28:63.09:0,63,697	0/0:30,0:30:66.17:0,66,754	0/0:27,0:27:59.70:0,60,649	0/0:23,0:24:48.84:0,49,493	0/0:21,0:21:33.05:0,33,386	0/0:33,0:30:45.80:0,46,601	0/0:37,0:41:83.94:0,84,950	0/0:47,0:48:95.90:0,96,1051	0/0:30,1:31:22.02:0,22,716	0/0:30,0:31:81:0,81,890	0/0:28,0:26:42.11:0,42,482	0/0:28,0:28:72:0,72,807	0/0:40,0:40:90.14:0,90,1003	0/0:17,0:18:38.84:0,39,393	0/0:25,0:24:46.91:0,47,507
chr10	29754347	.	T	TGA	2135.86	PASS	AB=0.842;AC=51;AF=0.944;AN=54;BaseQRankSum=1.396;DP=560;FS=4.504;HRun=0;HaplotypeScore=100.6725;InbreedingCoeff=-0.0247;MQ=66.47;MQ0=17;MQRankSum=-1.376;QD=4.14;ReadPosRankSum=-0.980;VQSLOD=2.3386;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:14:5.96:44,6,0	1/1:8,0:7:9.02:107,9,0	1/1:32,0:17:0.47:1,0,0	./.	1/1:27,0:26:15.29:110,15,0	1/1:20,0:19:9.03:121,9,0	0/1:16,6:23:5.12:80,0,5	1/1:21,0:21:8.81:58,9,0	0/1:14,7:22:20.29:121,0,20	1/1:15,0:18:15.92:142,16,0	1/1:13,0:12:3.01:40,3,0	1/1:22,0:19:2.17:8,2,0	1/1:18,1:19:16.97:145,17,0	1/1:13,0:16:3:26,3,0	1/1:13,4:17:9.02:115,9,0	0/1:21,0:20:15.09:105,0,15	1/1:8,0:7:2.99:24,3,0	1/1:13,0:11:10.78:72,11,0	1/1:18,0:14:11.99:81,12,0	1/1:24,0:23:9.01:106,9,0	1/1:17,0:17:9.03:121,9,0	1/1:24,1:25:11.42:136,11,0	1/1:18,0:17:4.81:29,5,0	1/1:18,0:28:9:79,9,0	1/1:13,0:13:3.83:79,4,0	1/1:20,0:19:23.84:224,24,0	1/1:16,0:25:8.10:51,8,0	1/1:7,0:7:4.07:12,4,0
chr10	29755618	.	TCACACACA	T	3669.88	PASS	AB=0.774;AC=39;AF=0.780;AN=50;BaseQRankSum=1.008;DP=582;FS=10.632;HRun=0;HaplotypeScore=134.2338;InbreedingCoeff=0.2479;MQ=45.94;MQ0=56;MQRankSum=-3.252;QD=9.02;ReadPosRankSum=-1.088;VQSLOD=1.6810;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:29:21.07:0,21,704	1/1:5,2:7:6.02:146,6,0	./.	./.	1/1:13,2:11:3.01:74,3,0	1/1:18,3:19:15.05:330,15,0	1/1:11,5:16:3.01:74,3,0	0/0:16,0:14:0:0,0,0	0/1:5,1:10:61:62,0,61	0/1:20,4:23:97.53:244,0,98	1/1:4,2:5:3.01:74,3,0	1/1:16,8:23:15.04:327,15,0	1/1:8,7:16:25.64:548,26,0	1/1:15,2:17:9.01:144,9,0	1/1:18,1:26:9.33:134,9,0	1/1:17,9:26:18.06:433,18,0	0/1:18,0:18:14.81:50,0,15	1/1:16,0:21:6.02:112,6,0	./.	1/1:10,8:18:9.03:213,9,0	0/0:25,0:21:3.01:0,3,46	1/1:15,4:17:6.02:129,6,0	1/1:13,0:9:6:98,6,0	1/1:31,5:36:4.82:128,5,0	1/1:24,1:23:15.01:179,15,0	1/1:11,2:13:5.99:94,6,0	1/1:22,3:24:3.48:76,3,0	0/0:8,0:6:3.01:0,3,52
chr10	29756572	.	T	TTTATTTATTTA	7254.47	PASS	AB=1.000;AC=43;AF=0.896;AN=48;BaseQRankSum=-1.742;DP=198;FS=1.714;HRun=0;HaplotypeScore=40.0089;InbreedingCoeff=0.2647;MQ=47.48;MQ0=3;MQRankSum=-1.088;QD=41.69;ReadPosRankSum=-0.633;VQSLOD=4.0835;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,0:10:24.36:461,24,0	./.	0/0:6,0:3:3.39:0,3,78	./.	1/1:4,1:5:15.05:413,15,0	1/1:0,7:11:9.03:518,9,0	./.	1/1:37,0:30:84.26:1896,84,0	1/1:3,0:2:6.02:75,6,0	1/1:5,0:4:12.03:239,12,0	1/1:2,0:2:6.02:106,6,0	1/1:0,2:3:6.02:345,6,0	1/1:4,0:4:9.03:212,9,0	1/1:1,0:1:3.01:53,3,0	1/1:2,0:2:3.01:122,3,0	1/1:0,2:4:3.01:173,3,0	1/1:4,9:17:6.02:205,6,0	1/1:1,10:15:12.04:548,12,0	0/1:15,0:13:47.94:529,0,48	1/1:4,0:3:9.03:212,9,0	0/0:2,0:2:6.02:0,6,141	1/1:1,0:1:3.01:98,3,0	1/1:5,0:4:9.03:228,9,0	1/1:3,0:3:8.99:105,9,0	1/1:0,8:10:3.01:173,3,0	1/1:0,2:6:15.05:367,15,0	1/1:10,0:9:12.04:178,12,0	./.
chr10	29756573	.	TTTA	T	2211.83	PASS	AB=0.862;AC=25;AF=0.521;AN=48;BaseQRankSum=-1.903;DP=181;FS=26.668;HRun=0;HaplotypeScore=35.0637;InbreedingCoeff=0.1565;MQ=45.87;MQ0=3;MQRankSum=0.137;QD=18.74;ReadPosRankSum=1.057;VQSLOD=1.2651;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,3:10:21.11:211,21,0	./.	0/0:6,0:3:3.63:0,4,78	./.	0/1:5,1:6:33.41:189,0,33	0/0:9,0:9:9.02:0,9,94	./.	0/1:26,13:32:99:823,0,127	1/1:1,2:2:6.02:75,6,0	0/1:4,1:4:24.18:70,0,24	1/1:0,2:2:6.02:105,6,0	0/0:2,0:2:6.02:0,6,63	1/1:0,4:4:9.03:157,9,0	1/1:0,1:1:3.01:53,3,0	1/1:1,0:1:2.96:19,3,0	0/0:2,0:2:3.01:0,3,32	0/0:14,0:14:5.75:0,6,55	0/1:12,1:13:40.83:41,0,83	0/1:11,2:11:49.50:181,0,50	1/1:1,3:3:9.03:157,9,0	0/0:2,0:2:5.91:0,6,38	1/1:0,1:1:3.01:53,3,0	1/1:2,3:4:8.98:125,9,0	0/1:3,0:3:4.01:14,0,4	0/0:11,0:10:6.02:0,6,74	0/0:4,0:4:8.61:0,9,84	0/1:6,2:7:16.84:94,0,17	./.
chr10	29756574	.	T	TA	1544.16	PASS	AB=0.970;AC=35;AF=0.729;AN=48;BaseQRankSum=3.085;DP=176;FS=21.264;HRun=0;HaplotypeScore=33.7810;InbreedingCoeff=0.0450;MQ=46.05;MQ0=3;MQRankSum=-1.521;QD=10.36;ReadPosRankSum=4.467;VQSLOD=1.9286;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:9,0:9:15.14:145,15,0	./.	0/1:5,0:3:2.76:3,0,69	./.	0/1:6,0:6:6.79:112,0,7	1/1:10,0:10:8.03:34,8,0	./.	0/1:37,2:32:8.52:548,0,9	1/1:2,0:2:5.87:34,6,0	0/1:5,1:5:7.61:61,0,8	1/1:2,0:2:6.01:59,6,0	1/1:2,0:2:5.42:23,5,0	1/1:4,0:4:9.01:93,9,0	1/1:1,0:1:3:25,3,0	1/1:0,1:1:3.01:47,3,0	1/1:2,0:2:2.68:11,3,0	0/0:12,0:12:5.36:0,5,32	1/1:13,0:13:11.04:61,11,0	0/1:11,1:10:5.05:112,0,5	1/1:4,0:3:9.02:100,9,0	0/0:2,0:2:3.63:0,4,10	1/1:1,0:1:3.01:33,3,0	1/1:3,2:4:9.01:99,9,0	0/1:2,0:2:0.41:15,0,0	0/1:11,0:10:5.76:6,0,22	0/1:4,0:4:3.93:4,0,24	0/1:7,0:6:0.70:47,0,1	./.
chr10	29756584	.	T	TTA	490.91	PASS	AB=0.921;AC=15;AF=0.313;AN=48;BaseQRankSum=3.836;DP=174;FS=7.990;HRun=0;HaplotypeScore=42.6362;InbreedingCoeff=0.0079;MQ=47.83;MQ0=3;MQRankSum=-2.618;QD=5.52;ReadPosRankSum=2.462;VQSLOD=1.0741;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:11,0:11:22.93:23,0,168	./.	1/1:4,0:2:0.64:3,1,0	./.	0/1:5,0:5:38.77:39,0,74	0/0:10,0:10:14.76:0,15,140	./.	0/1:36,2:31:99:310,0,596	./.	0/1:4,1:4:42.68:43,0,116	0/0:2,0:2:5.82:0,6,34	0/0:2,0:2:5.89:0,6,38	1/1:2,0:2:2.99:39,3,0	0/0:1,0:1:2.98:0,3,22	1/1:0,1:1:3.01:55,3,0	0/0:2,0:2:2.97:0,3,20	0/0:14,0:13:18.06:0,18,254	0/0:13,0:13:14.93:0,15,127	0/1:14,0:12:8.28:8,0,304	0/1:4,0:4:24.70:30,0,25	0/0:2,0:2:6.02:0,6,86	1/1:1,0:1:3.01:31,3,0	0/1:2,2:3:31.08:46,0,31	0/0:2,0:2:6.02:0,6,86	0/0:14,0:13:14.64:0,15,173	0/0:4,0:4:9:0,9,107	0/0:6,0:5:14.96:0,15,188	0/0:6,0:4:3.01:0,3,43
chr10	29756588	.	T	TTA	600.38	PASS	AB=0.944;AC=14;AF=0.292;AN=48;BaseQRankSum=3.909;DP=181;FS=14.618;HRun=0;HaplotypeScore=38.7559;InbreedingCoeff=0.0712;MQ=51.05;MQ0=8;MQRankSum=-1.987;QD=7.50;ReadPosRankSum=-0.050;VQSLOD=1.2536;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:3.15:0,3,231	./.	1/1:5,0:3:3.06:9,3,0	./.	0/1:5,0:5:30.20:30,0,107	0/0:12,0:12:15.05:0,15,199	./.	0/1:36,3:31:99:429,0,605	./.	0/1:5,0:4:26.55:27,0,117	0/0:3,0:2:3.01:0,3,43	0/0:2,0:2:6.02:0,6,80	1/1:0,1:1:3.01:54,3,0	0/0:1,0:1:0:0,0,0	1/1:1,0:1:3.01:39,3,0	0/0:2,0:2:3.01:0,3,40	0/0:15,0:14:17.95:0,18,230	0/0:12,0:12:18.01:0,18,223	0/1:14,1:13:20.96:21,0,357	0/1:3,1:4:36.72:48,0,37	0/0:2,0:2:6.02:0,6,86	1/1:1,0:1:3.01:45,3,0	0/1:3,0:2:34.16:34,0,37	0/0:2,0:2:6.02:0,6,86	0/0:14,0:13:15.05:0,15,205	0/0:4,0:4:9.03:0,9,127	0/0:6,0:5:12.04:0,12,172	0/0:6,0:4:3.01:0,3,43
chr10	29756670	.	C	CT	2196.92	PASS	AB=0.843;AC=42;AF=0.750;AN=56;BaseQRankSum=-4.064;DP=378;FS=0.000;HRun=14;HaplotypeScore=33.4337;InbreedingCoeff=-0.0534;MQ=59.28;MQ0=16;MQRankSum=1.250;QD=6.64;ReadPosRankSum=-0.689;VQSLOD=0.9712;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:22:3.80:0,4,130	1/1:3,1:3:3:26,3,0	0/0:25,0:5:6.63:0,7,51	0/1:28,0:10:5.06:5,0,13	0/1:12,2:14:4.47:71,0,4	0/1:3,8:11:17.54:111,0,18	0/1:8,0:6:13.62:14,0,30	1/1:20,7:21:9.19:199,9,0	1/1:8,0:7:2.84:14,3,0	0/1:9,9:19:31.64:146,0,32	1/1:4,10:14:15:131,15,0	1/1:4,0:4:8.96:69,9,0	1/1:7,0:7:8.97:71,9,0	1/1:1,3:4:3:26,3,0	1/1:2,6:9:2.17:47,2,0	1/1:1,5:6:6:53,6,0	1/1:24,8:32:53.60:422,54,0	1/1:17,1:18:26.80:213,27,0	0/1:20,2:15:4.54:73,0,5	1/1:3,10:13:2.96:82,3,0	1/1:0,2:2:3:26,3,0	0/1:2,2:4:12.02:20,0,12	1/1:1,5:5:6:53,6,0	1/1:5,9:14:9:79,9,0	1/1:10,4:14:20.80:163,21,0	0/1:14,3:17:5.30:93,0,5	0/1:11,0:10:4.31:77,0,4	0/1:10,1:11:5.89:54,0,6
chr10	29759813	.	C	CT	10155.17	PASS	AB=0.584;AC=44;AF=0.786;AN=56;BaseQRankSum=-9.732;DP=576;FS=20.359;HRun=10;HaplotypeScore=62.9810;InbreedingCoeff=0.5970;MQ=78.11;MQ0=0;MQRankSum=-2.351;QD=20.77;ReadPosRankSum=0.489;VQSLOD=3.7178;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:27:66.99:0,67,529	1/1:2,8:11:23.93:239,24,0	0/0:21,0:21:36.95:0,37,276	0/0:13,0:14:19:0,19,131	0/1:8,14:23:1.40:368,0,1	0/1:4,22:27:4.93:553,0,5	1/1:3,13:17:10.51:353,11,0	0/1:13,20:33:26.41:559,0,26	0/0:24,0:25:64.94:0,65,520	1/1:3,16:19:48.12:506,48,0	1/1:1,17:19:25.63:513,26,0	1/1:5,14:19:39.10:416,39,0	1/1:5,20:24:18.61:563,19,0	1/1:2,16:19:50.96:526,51,0	1/1:4,8:12:2.42:231,2,0	1/1:3,13:16:30.08:320,30,0	1/1:2,1:15:34.29:189,34,0	1/1:2,5:22:46.39:317,46,0	0/1:5,15:21:0.10:378,0,0	1/1:5,21:28:18.81:607,19,0	1/1:0,15:15:42.11:448,42,0	1/1:4,17:21:48.12:511,48,0	1/1:3,13:17:18.16:368,18,0	1/1:4,18:22:23.44:442,23,0	1/1:6,18:26:7.52:459,8,0	1/1:7,21:29:38.49:606,38,0	1/1:7,15:22:42.07:437,42,0	1/1:1,9:11:5.29:246,5,0
chr10	29760290	.	AGAAGAG	A	987.81	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.588;DP=729;FS=3.251;HRun=0;HaplotypeScore=145.3659;InbreedingCoeff=0.8972;MQ=77.99;MQ0=1;MQRankSum=-6.895;QD=26.00;ReadPosRankSum=-1.214;VQSLOD=3.1908;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,23:38:51.11:1083,51,0	0/0:10,0:10:18.06:0,18,501	0/0:31,0:24:33.10:0,33,902	0/0:32,0:30:29.86:0,30,858	0/0:24,0:24:51.17:0,51,1690	0/0:28,0:28:78.23:0,78,2369	0/0:31,0:31:63.22:0,63,2055	0/0:31,0:31:75.04:0,75,2276	0/0:20,0:20:48.15:0,48,1474	0/0:29,0:29:72.25:0,72,2346	0/0:21,0:21:42.14:0,42,1297	0/0:35,0:35:87.30:0,87,2891	0/0:31,0:31:72.25:0,72,2402	0/0:18,0:18:45.15:0,45,1433	0/0:29,0:29:54.19:0,54,1774	0/0:30,0:30:72.25:0,72,2367	0/0:18,0:18:48.16:0,48,1523	0/0:22,0:22:48.16:0,48,1572	0/0:14,0:14:27.09:0,27,903	0/0:23,0:23:42.14:0,42,1404	0/0:34,0:34:90.27:0,90,2817	0/0:29,0:29:75.26:0,75,2344	0/0:28,0:28:63.22:0,63,2026	0/0:35,0:35:81.26:0,81,2516	0/0:24,0:24:66.23:0,66,2114	0/0:26,0:26:63.21:0,63,1983	0/0:36,0:36:93.32:0,93,3005	0/0:2,0:2:6.02:0,6,201
chr10	29760613	.	C	CCT	19930.44	PASS	AB=0.548;AC=49;AF=0.875;AN=56;BaseQRankSum=-1.968;DP=701;FS=4.428;HRun=0;HaplotypeScore=129.4043;InbreedingCoeff=0.8687;MQ=77.31;MQ0=3;MQRankSum=-5.514;QD=33.16;ReadPosRankSum=5.147;VQSLOD=7.1753;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,99,1222	1/1:1,10:11:24.08:396,24,0	0/0:23,0:22:29.75:0,30,337	0/0:36,0:35:64.10:0,64,719	1/1:5,21:26:60.11:969,60,0	1/1:2,23:25:51.17:827,51,0	1/1:7,22:31:63.22:1041,63,0	1/1:11,22:33:69.24:1137,69,0	1/1:4,0:24:57.02:504,57,0	1/1:6,14:20:7.62:645,8,0	0/1:3,13:17:1.40:507,0,1	1/1:2,17:19:39.13:644,39,0	1/1:6,20:26:45.15:743,45,0	1/1:0,11:11:30.10:495,30,0	1/1:8,22:30:57.19:941,57,0	1/1:1,22:24:66.22:1067,66,0	1/1:9,45:55:99:2030,123,0	1/1:2,10:12:24.08:396,24,0	1/1:5,12:17:39.13:611,39,0	1/1:5,18:23:45.15:716,45,0	1/1:6,38:44:99:1635,99,0	1/1:3,21:25:45.15:743,45,0	1/1:2,15:17:39.13:644,39,0	1/1:4,20:24:45.15:743,45,0	1/1:3,14:18:42.14:691,42,0	1/1:6,15:22:13.47:718,13,0	1/1:11,16:27:33.11:543,33,0	1/1:2,16:18:33.11:545,33,0
chr10	29760950	.	AT	A	9535.87	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-0.647;DP=447;FS=2.288;HRun=8;HaplotypeScore=55.7650;InbreedingCoeff=0.9766;MQ=82.48;MQ0=0;MQRankSum=-3.294;QD=23.90;ReadPosRankSum=3.740;VQSLOD=5.5187;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:45.08:0,45,516	1/1:0,6:6:15.02:145,15,0	0/0:16,0:16:36.08:0,36,393	0/0:15,0:14:13.42:0,13,210	1/1:2,18:20:38.89:376,39,0	1/1:0,20:20:51.08:492,51,0	1/1:1,18:19:54.09:521,54,0	1/1:7,19:26:54.04:509,54,0	1/1:2,11:13:33.05:319,33,0	1/1:2,14:16:42.07:406,42,0	1/1:3,15:18:42.01:396,42,0	1/1:0,17:17:45.07:435,45,0	1/1:1,7:8:21.03:201,21,0	1/1:0,9:9:27.04:261,27,0	1/1:0,5:5:15.02:145,15,0	1/1:0,17:17:51.08:492,51,0	1/1:4,17:21:48.07:463,48,0	1/1:0,15:15:36.03:340,36,0	1/1:0,15:15:42.03:394,42,0	1/1:2,21:23:63.06:600,63,0	1/1:1,16:17:48.08:463,48,0	1/1:1,19:20:51.08:492,51,0	1/1:4,10:14:27.04:261,27,0	1/1:3,17:20:39.06:377,39,0	1/1:1,14:15:42.07:406,42,0	1/1:3,15:18:42.06:406,42,0	1/1:4,16:20:45.06:434,45,0	1/1:0,7:7:21.03:203,21,0
chr10	29760996	.	A	AACAC	5811.01	PASS	AB=1.000;AC=45;AF=0.833;AN=54;BaseQRankSum=-4.836;DP=474;FS=1.223;HRun=0;HaplotypeScore=130.3874;InbreedingCoeff=0.3016;MQ=66.85;MQ0=7;MQRankSum=1.988;QD=14.82;ReadPosRankSum=0.922;VQSLOD=4.7011;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:14:0.47:0,0,1	1/1:9,0:9:15.04:240,15,0	0/0:30,0:25:0:0,0,0	./.	1/1:25,1:25:26.79:355,27,0	1/1:20,3:23:32.08:576,32,0	1/1:13,1:14:9:95,9,0	1/1:17,0:17:2.72:93,3,0	0/0:8,0:12:13.50:0,14,103	1/1:14,0:13:15.32:145,15,0	1/1:10,2:12:11.89:181,12,0	1/1:19,2:22:23.76:304,24,0	1/1:9,1:11:16.63:296,17,0	1/1:6,0:6:6:83,6,0	1/1:10,1:11:21.02:329,21,0	1/1:16,2:18:32.43:526,32,0	1/1:26,0:26:19.23:146,19,0	1/1:16,0:16:12.51:164,13,0	0/1:14,0:13:34:53,0,34	1/1:18,0:18:19.95:128,20,0	0/1:18,0:18:36.41:107,0,36	1/1:21,0:19:23.32:305,23,0	1/1:11,0:10:12.48:169,12,0	1/1:21,3:22:37.29:580,37,0	0/1:16,0:17:16.09:85,0,16	1/1:16,0:17:10.40:417,10,0	1/1:13,2:15:9.11:152,9,0	1/1:10,1:10:17.63:280,18,0
chr10	29761037	.	TCA	T	263.41	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=1.599;DP=494;FS=7.361;HRun=0;HaplotypeScore=109.4588;InbreedingCoeff=0.5258;MQ=52.20;MQ0=18;MQRankSum=-1.052;QD=9.08;ReadPosRankSum=0.745;VQSLOD=2.7195;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:18:3.41:0,3,26	0/0:10,0:10:18.01:0,18,232	0/0:16,0:4:10.81:0,11,118	0/0:21,0:8:22.01:0,22,241	0/0:33,0:32:65.80:0,66,830	0/0:24,0:24:46.32:0,46,592	0/0:17,0:17:33.09:0,33,498	0/0:32,0:31:32.28:0,32,911	1/1:8,5:12:32.67:354,33,0	0/0:16,0:15:7.03:0,7,331	0/0:16,0:16:27.09:0,27,407	0/0:15,0:14:21.07:0,21,309	0/0:12,0:12:25.33:0,25,325	0/0:7,0:7:21.05:0,21,300	0/0:15,0:15:38.39:0,38,534	0/0:22,0:20:35.49:0,35,507	0/0:20,0:24:29.80:0,30,159	0/0:12,0:14:16.50:0,16,93	0/0:13,0:13:22.30:0,22,293	0/0:19,0:18:33.09:0,33,434	0/0:12,0:12:20.46:0,20,232	0/0:19,0:18:35.48:0,35,521	0/1:16,0:15:12.17:12,0,246	0/0:23,0:21:40.87:0,41,528	0/0:20,0:20:39.03:0,39,549	0/0:20,0:19:39.03:0,39,509	0/0:15,0:14:32.91:0,33,392	0/0:10,0:9:17.96:0,18,187
chr10	29761074	.	CAG	C	562.82	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.931;DP=428;FS=7.142;HRun=0;HaplotypeScore=67.2471;InbreedingCoeff=0.9256;MQ=84.49;MQ0=0;MQRankSum=-3.285;QD=29.62;ReadPosRankSum=0.962;VQSLOD=5.1769;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:2,17:19:45.15:658,45,0	0/0:5,0:5:15.05:0,15,281	0/0:19,0:19:54.10:0,54,950	0/0:24,0:23:51.16:0,51,879	0/0:24,0:24:72.25:0,72,1310	0/0:21,0:21:60.21:0,60,1124	0/0:17,0:17:48.16:0,48,875	0/0:38,0:38:99:0,108,1985	0/0:15,0:15:39.12:0,39,698	0/0:16,0:16:42.14:0,42,781	0/0:13,0:13:36.12:0,36,665	0/0:10,0:10:27.08:0,27,474	0/0:10,0:10:30.10:0,30,549	0/0:9,0:9:27.06:0,27,441	0/0:17,0:17:51.17:0,51,944	0/0:14,0:14:42.14:0,42,786	0/0:19,0:19:54.19:0,54,1003	0/0:13,0:13:33.07:0,33,582	0/0:18,0:18:51.17:0,51,944	0/0:15,0:15:42.14:0,42,780	0/0:9,0:9:24.08:0,24,449	0/0:13,0:13:39.13:0,39,730	0/0:9,0:9:27.09:0,27,506	0/0:14,0:14:42.13:0,42,755	0/0:15,0:15:42.14:0,42,777	0/0:11,0:11:33.11:0,33,618	0/0:18,0:18:54.19:0,54,1010	0/0:3,0:3:9.03:0,9,169
chr10	29761616	.	AAAAAG	A	892.56	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.402;DP=631;FS=10.188;HRun=0;HaplotypeScore=110.0465;InbreedingCoeff=0.8140;MQ=58.68;MQ0=9;MQRankSum=-6.391;QD=17.16;ReadPosRankSum=-0.186;VQSLOD=2.7605;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,30:35:45.08:739,45,0	0/0:9,0:9:24.07:0,24,553	0/0:14,0:6:6.46:0,6,113	0/0:7,0:3:6.47:0,6,70	0/0:19,0:19:54.15:0,54,1201	0/0:24,0:24:60.05:0,60,1295	0/0:20,0:20:54.17:0,54,1413	0/0:22,0:22:57.15:0,57,1160	1/1:5,12:15:3.22:262,3,0	0/0:30,0:30:84.24:0,84,1769	0/0:17,0:17:26.17:0,26,867	0/0:23,0:22:53.23:0,53,1089	0/0:29,0:28:81.21:0,81,1830	0/0:22,0:22:63.09:0,63,1422	0/0:22,0:22:60.19:0,60,1509	0/0:19,0:19:57.13:0,57,1280	0/0:40,0:40:99:0,108,2423	0/0:34,0:34:99:0,99,2285	0/0:24,0:23:66.09:0,66,1343	0/0:26,0:25:43.46:0,43,1184	0/0:18,0:17:45.13:0,45,1133	0/0:22,0:21:51.12:0,51,1207	0/0:9,0:9:27.07:0,27,513	0/0:33,0:32:93.24:0,93,2217	0/0:32,0:32:88.66:0,89,1960	0/0:29,0:28:81.18:0,81,1665	0/0:21,0:21:52.88:0,53,1318	0/0:14,0:14:35.42:0,35,873
chr10	29762160	.	T	TAACAACAACAAC	25715.04	PASS	AB=0.806;AC=48;AF=0.857;AN=56;BaseQRankSum=-3.091;DP=870;FS=11.534;HRun=0;HaplotypeScore=254.2298;InbreedingCoeff=0.6867;MQ=54.26;MQ0=2;MQRankSum=-9.882;QD=32.67;ReadPosRankSum=-3.564;VQSLOD=2.1451;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:71.26:0,71,2262	1/1:7,0:25:18.02:772,18,0	0/1:25,0:16:0.18:0,0,251	0/0:23,0:20:22.99:0,23,487	1/1:10,0:25:9.03:469,9,0	1/1:11,1:35:21.54:1118,22,0	1/1:10,0:25:3.01:153,3,0	1/1:40,0:39:57.14:2130,57,0	1/1:14,0:36:42.13:514,42,0	1/1:19,0:41:42.58:1593,43,0	1/1:12,0:28:20.99:788,21,0	1/1:17,0:36:30.10:1568,30,0	1/1:23,0:28:27.09:1262,27,0	1/1:16,0:34:27.09:1406,27,0	1/1:15,0:42:39.13:2039,39,0	1/1:16,0:45:33.11:1726,33,0	0/1:14,0:38:67.03:67,0,467	0/0:7,0:18:26.88:0,27,208	1/1:19,0:20:35.12:1059,35,0	1/1:22,0:42:30.02:1429,30,0	1/1:17,0:17:20.92:543,21,0	1/1:17,1:31:30:1167,30,0	1/1:11,0:21:5.69:307,6,0	1/1:10,0:23:21.07:1049,21,0	1/1:17,0:37:17.27:791,17,0	1/1:19,0:38:57.66:2360,58,0	1/1:17,0:35:21.07:1090,21,0	1/1:11,0:19:6.02:314,6,0
chr10	29763626	.	A	AC	4868.62	PASS	AB=0.639;AC=46;AF=0.821;AN=56;BaseQRankSum=-5.660;DP=317;FS=24.304;HRun=8;HaplotypeScore=40.7458;InbreedingCoeff=0.2077;MQ=83.83;MQ0=1;MQRankSum=-3.358;QD=17.20;ReadPosRankSum=0.323;VQSLOD=3.1117;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,13:19:17.84:186,18,0	1/1:3,3:6:3.01:35,3,0	0/0:19,0:17:35.20:0,35,296	0/1:9,0:9:12.45:12,0,87	1/1:0,10:10:18.05:207,18,0	1/1:2,7:9:3.01:35,3,0	1/1:7,12:19:5.62:310,6,0	1/1:6,11:17:24.05:265,24,0	0/0:15,0:15:42:0,42,379	1/1:3,7:10:15.04:173,15,0	0/1:2,4:6:15.41:92,0,15	1/1:5,10:15:15.04:165,15,0	1/1:1,2:3:9:85,9,0	1/1:2,8:10:12.04:139,12,0	0/1:3,8:12:31.02:154,0,31	0/1:1,5:6:15.39:92,0,15	1/1:0,19:19:44.97:498,45,0	1/1:2,11:13:33.10:381,33,0	1/1:3,8:11:24.07:277,24,0	1/1:1,8:9:24.07:277,24,0	1/1:3,10:13:2.60:284,3,0	1/1:0,7:7:12.04:138,12,0	1/1:0,5:5:12.04:139,12,0	0/1:4,11:15:0.24:250,0,0	1/1:4,7:11:12.04:138,12,0	1/1:2,4:6:9.03:103,9,0	1/1:2,14:16:23.97:277,24,0	0/1:1,6:7:9.41:155,0,9
chr10	29765995	.	GGAGGGAGA	G	1754.34	PASS	AB=1.000;AC=39;AF=0.722;AN=54;BaseQRankSum=-5.635;DP=250;FS=3.214;HRun=0;HaplotypeScore=62.5275;InbreedingCoeff=0.0127;MQ=64.02;MQ0=13;MQRankSum=2.326;QD=8.01;ReadPosRankSum=2.393;VQSLOD=0.8694;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:15:20.79:171,21,0	1/1:4,0:4:2.48:25,2,0	0/1:9,0:4:16.74:17,0,17	0/1:13,0:4:0.03:0,0,8	./.	0/1:8,0:8:6.82:68,0,7	1/1:14,0:14:17.79:183,18,0	0/1:18,0:17:34.11:94,0,34	0/1:8,0:8:2.92:3,0,242	1/1:10,0:9:18.17:151,18,0	1/1:4,0:4:5.98:47,6,0	1/1:2,10:12:5.95:102,6,0	1/1:1,14:15:2.28:75,2,0	1/1:6,0:6:9.99:65,10,0	0/0:12,0:11:10.73:0,11,122	1/1:8,0:8:17.26:176,17,0	0/1:8,0:7:7.27:50,0,7	0/1:5,0:5:32.63:39,0,33	1/1:7,0:7:2.98:94,3,0	0/0:2,0:1:0.47:0,0,1	1/1:18,0:16:7.94:211,8,0	1/1:3,0:3:2.31:25,2,0	1/1:4,0:4:4.62:31,5,0	1/1:3,0:3:2.99:23,3,0	1/1:2,0:5:3:25,3,0	0/1:9,0:7:38.20:117,0,38	0/0:12,0:11:3.01:0,3,49	0/1:10,0:8:25.61:107,0,26
chr10	29765997	.	AGG	A	1862.85	PASS	AB=0.951;AC=42;AF=0.778;AN=54;BaseQRankSum=-4.964;DP=248;FS=0.000;HRun=3;HaplotypeScore=45.3556;InbreedingCoeff=-0.1272;MQ=63.74;MQ0=14;MQRankSum=1.789;QD=8.10;ReadPosRankSum=3.373;VQSLOD=0.2004;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:16:21.52:191,22,0	1/1:5,0:4:2.67:26,3,0	0/1:9,0:4:16.07:16,0,23	0/0:11,0:3:1.16:0,1,12	./.	1/1:7,0:7:10.06:82,10,0	0/1:15,0:14:14.12:104,0,14	0/1:17,0:16:34.22:94,0,34	0/1:9,0:8:11.20:11,0,82	1/1:10,0:9:18.56:152,19,0	1/1:5,0:5:5.78:47,6,0	1/1:12,0:11:5.94:42,6,0	1/1:15,0:15:2.37:15,2,0	0/1:5,0:5:9.85:10,0,84	0/1:4,7:10:24.68:81,0,25	0/1:8,0:8:14.94:108,0,15	1/1:9,0:8:17.43:150,17,0	1/1:4,0:4:11.47:81,11,0	0/1:7,0:7:15.76:91,0,16	0/0:2,0:1:0.89:0,1,2	1/1:18,0:16:0.71:200,1,0	1/1:3,0:3:2.60:26,3,0	1/1:5,0:5:4.93:31,5,0	1/1:3,0:3:2.99:23,3,0	1/1:3,0:3:2.99:24,3,0	1/1:10,0:8:18.90:168,19,0	1/1:3,10:12:5.86:81,6,0	1/1:11,0:9:20.81:148,21,0
chr10	29766279	.	TCTC	T	3885.56	PASS	AB=0.672;AC=42;AF=0.750;AN=56;BaseQRankSum=4.779;DP=407;FS=6.346;HRun=0;HaplotypeScore=79.2020;InbreedingCoeff=0.4164;MQ=61.45;MQ0=12;MQRankSum=-2.505;QD=12.26;ReadPosRankSum=1.364;VQSLOD=2.1875;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:20:13.22:0,13,100	0/1:3,1:4:19.30:30,0,19	0/0:25,0:15:2.33:0,2,110	0/0:17,0:11:4.41:0,4,116	1/1:3,12:14:9.03:113,9,0	1/1:4,12:16:12.04:162,12,0	0/1:8,11:19:7.21:165,0,7	0/1:10,10:20:8.07:263,0,8	1/1:10,0:10:2.90:16,3,0	1/1:13,5:16:27.55:357,28,0	1/1:6,9:15:3.89:37,4,0	1/1:3,8:10:14.94:184,15,0	1/1:6,8:14:21.06:271,21,0	1/1:10,5:12:21.07:275,21,0	1/1:13,6:18:26.38:379,26,0	1/1:4,9:13:27.09:367,27,0	0/0:14,0:13:36.12:0,36,636	0/0:13,0:13:30.10:0,30,586	1/1:6,3:8:9.03:132,9,0	1/1:4,6:10:8.06:94,8,0	1/1:5,12:17:14.96:187,15,0	1/1:4,6:9:5.03:52,5,0	1/1:0,9:9:6.02:80,6,0	1/1:9,16:24:12.04:165,12,0	0/1:4,12:17:31.51:35,0,32	1/1:4,11:14:32.96:372,33,0	1/1:1,7:8:9.03:112,9,0	1/1:3,4:7:3.01:37,3,0
chr10	29766291	.	CCTCCTT	C	947.99	PASS	AB=1.000;AC=31;AF=0.554;AN=56;BaseQRankSum=-2.054;DP=393;FS=0.830;HRun=0;HaplotypeScore=101.5701;InbreedingCoeff=-0.2719;MQ=46.23;MQ0=25;MQRankSum=-1.546;QD=2.74;ReadPosRankSum=-2.987;VQSLOD=1.3531;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:16:11.72:140,12,0	0/1:5,0:4:12.17:12,0,37	0/1:18,0:8:8.91:9,0,23	0/0:11,0:5:6.02:0,6,77	1/1:23,0:20:2.64:43,3,0	0/1:13,0:13:23.21:26,0,23	0/1:19,0:16:5.44:54,0,5	0/1:20,0:19:15.53:75,0,16	1/1:1,9:9:3.01:51,3,0	0/1:23,0:21:36.93:37,0,106	0/1:13,0:12:10.06:12,0,10	0/1:12,0:10:9.58:10,0,25	0/1:11,0:11:6.43:63,0,6	0/1:14,0:11:28.65:29,0,59	0/1:16,0:14:38.92:39,0,67	0/1:11,0:11:32.10:63,0,32	0/0:15,0:13:35.97:0,36,597	0/0:11,0:10:30.09:0,30,686	0/1:9,0:8:14.71:34,0,15	0/0:9,0:9:9.40:0,9,48	0/1:16,0:16:24.04:42,0,24	0/1:9,0:7:19.91:20,0,29	1/1:11,0:11:4.48:45,4,0	1/1:21,0:19:11.95:75,12,0	0/1:20,0:18:20.93:21,0,56	0/1:20,0:18:57.72:94,0,58	1/1:7,0:7:8.85:56,9,0	1/1:7,0:7:8.91:62,9,0
chr10	29766319	.	TTCC	T	322.87	PASS	AB=0.964;AC=24;AF=0.462;AN=52;BaseQRankSum=1.938;DP=329;FS=3.003;HRun=0;HaplotypeScore=83.7955;InbreedingCoeff=-0.2863;MQ=32.18;MQ0=29;MQRankSum=-2.306;QD=1.18;ReadPosRankSum=1.032;VQSLOD=1.5495;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:7:10.49:0,10,93	0/1:9,0:7:8.86:11,0,9	./.	./.	0/1:16,1:13:13.65:26,0,14	0/0:9,0:9:7.30:0,7,83	0/1:16,0:12:21.97:31,0,22	0/1:26,0:23:10.59:11,0,94	1/1:7,0:6:3.07:11,3,0	0/1:22,2:20:16.21:16,0,150	0/0:11,0:10:0.87:0,1,2	0/1:11,2:11:12.21:40,0,12	0/1:9,0:8:6.85:9,0,7	0/1:15,0:11:4.93:5,0,39	0/1:15,0:12:54.15:59,0,54	1/1:12,1:13:2.64:49,3,0	0/1:9,1:8:27.60:28,0,132	0/0:8,0:7:7.27:0,7,105	0/1:14,1:14:48.85:49,0,107	0/1:7,1:6:1.34:3,0,1	0/0:9,0:9:5.31:0,5,26	0/1:10,0:9:19.70:20,0,27	0/1:6,0:5:0.77:23,0,1	1/1:17,0:16:0.05:1,0,0	0/1:12,0:10:23.22:23,0,45	0/1:21,1:20:33.18:33,0,59	0/0:4,0:4:3:0,3,25	1/1:9,0:8:5.02:14,5,0
chr10	29766325	.	C	CTCT	324.72	PASS	AB=0.945;AC=11;AF=0.212;AN=52;BaseQRankSum=1.244;DP=291;FS=0.000;HRun=0;HaplotypeScore=81.5513;InbreedingCoeff=-0.0410;MQ=31.69;MQ0=29;MQRankSum=-2.311;QD=2.82;ReadPosRankSum=1.003;VQSLOD=1.5724;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:6,3:7:15.07:143,0,15	0/0:7,0:5:11.04:0,11,56	./.	./.	0/0:14,0:10:3.84:0,4,15	0/0:9,0:9:17.57:0,18,172	0/0:13,0:8:3.81:0,4,48	0/0:24,0:21:42.49:0,42,322	1/1:7,0:6:0.59:2,1,0	0/1:24,0:20:10.42:10,0,248	1/1:7,2:8:5.98:74,6,0	0/1:12,1:11:62.89:96,0,63	0/0:9,0:8:7.44:0,7,41	0/1:13,1:10:42.10:42,0,64	0/0:15,0:12:15.01:0,15,186	0/0:11,0:11:13.12:0,13,150	0/0:10,0:8:17.35:0,17,202	0/0:5,0:4:4.97:0,5,113	0/1:13,0:12:11.27:11,0,189	0/0:7,0:5:8.86:0,9,87	0/0:9,0:9:5.39:0,5,74	0/0:9,0:8:11.65:0,12,95	0/0:6,0:5:2.52:0,3,28	0/0:14,0:13:2.47:0,2,7	0/0:10,0:8:11.43:0,11,85	0/1:18,0:16:52.34:52,0,134	0/0:4,0:4:3.01:0,3,31	0/1:8,0:7:23.85:24,0,28
chr10	29766811	.	G	GCTACTAC	2834.10	PASS	AB=0.739;AC=29;AF=0.518;AN=56;BaseQRankSum=2.130;DP=325;FS=0.000;HRun=0;HaplotypeScore=105.1084;InbreedingCoeff=-0.3572;MQ=43.08;MQ0=1;MQRankSum=-1.927;QD=11.34;ReadPosRankSum=-1.599;VQSLOD=2.0640;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:8:6.02:0,6,95	0/1:5,0:7:31.15:31,0,129	0/0:18,0:9:18.95:0,19,252	0/0:28,0:14:35.95:0,36,525	1/1:15,0:15:2.99:24,3,0	0/1:12,0:11:60.31:83,0,60	0/1:6,0:10:45:45,0,61	0/0:15,0:15:2.27:0,2,385	0/1:6,0:7:32.11:95,0,32	0/1:13,0:23:99:371,0,404	0/0:4,0:5:1.82:0,2,5	0/1:8,0:16:95.21:346,0,95	0/1:5,0:7:85.13:85,0,126	0/1:11,0:14:60.30:175,0,60	0/1:5,1:11:32.63:119,0,33	0/1:6,0:12:72.02:145,0,72	0/1:4,0:7:45.02:45,0,55	0/1:1,0:2:35.78:48,0,36	0/1:4,0:5:76.08:76,0,110	1/1:1,0:9:9.03:154,9,0	1/1:8,0:8:3.01:49,3,0	1/1:6,0:13:2.54:85,3,0	0/1:6,0:9:74.74:91,0,75	1/1:7,0:12:6.02:108,6,0	0/1:6,0:13:1.76:149,0,2	0/1:7,0:13:99:225,0,295	0/1:12,0:18:99:297,0,137	1/1:3,0:3:9:145,9,0
chr10	29767453	.	T	TACACACACAC	12619.34	PASS	AB=0.762;AC=50;AF=0.926;AN=54;BaseQRankSum=-2.013;DP=632;FS=0.000;HRun=0;HaplotypeScore=226.2027;InbreedingCoeff=0.2963;MQ=55.86;MQ0=10;MQRankSum=-0.742;QD=21.95;ReadPosRankSum=1.023;VQSLOD=3.9579;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:19,0:26:1.06:260,0,1	1/1:7,0:8:6.49:240,6,0	0/0:26,0:18:2.76:0,3,30	./.	1/1:16,3:21:8.67:443,9,0	1/1:19,3:23:8.80:445,9,0	1/1:30,0:29:18:528,18,0	1/1:19,0:19:18.05:441,18,0	1/1:11,0:24:18.06:302,18,0	1/1:15,0:14:11.82:303,12,0	0/1:9,5:14:0:0,0,0	1/1:29,0:28:14.18:352,14,0	1/1:13,0:12:13.59:344,14,0	1/1:22,3:26:3.48:149,3,0	1/1:24,0:24:11.63:432,12,0	1/1:15,7:25:33.11:1481,33,0	1/1:15,0:20:28.65:1109,29,0	1/1:17,1:18:18.03:640,18,0	1/1:14,3:15:9.96:405,10,0	1/1:19,0:19:5.82:210,6,0	1/1:27,0:24:15.03:431,15,0	1/1:18,0:32:0.22:46,0,0	1/1:22,8:30:6.95:301,7,0	1/1:18,1:26:8.64:311,9,0	1/1:13,7:21:12.51:479,13,0	1/1:31,0:31:30.10:944,30,0	1/1:18,4:23:33.11:1248,33,0	1/1:8,2:11:18.06:778,18,0
chr10	29769708	.	G	GA	4590.79	PASS	AB=0.880;AC=50;AF=0.926;AN=54;BaseQRankSum=-3.344;DP=450;FS=5.591;HRun=9;HaplotypeScore=79.8360;InbreedingCoeff=0.3383;MQ=68.44;MQ0=10;MQRankSum=-1.071;QD=11.80;ReadPosRankSum=1.253;VQSLOD=4.3849;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:11,8:15:6.02:67,6,0	1/1:2,5:6:12.02:122,12,0	0/0:56,0:23:18.61:0,19,134	0/1:56,0:17:9.68:10,0,50	1/1:15,2:16:20.86:204,21,0	1/1:11,4:14:14.63:167,15,0	1/1:4,6:11:18.28:163,18,0	1/1:13,13:26:40.93:412,41,0	1/1:3,4:7:12.02:124,12,0	1/1:12,2:14:15:146,15,0	1/1:12,2:14:12.01:122,12,0	1/1:10,2:12:12.50:134,13,0	1/1:3,2:4:7.26:66,7,0	1/1:4,2:6:9.02:99,9,0	1/1:7,3:10:11.64:106,12,0	1/1:4,6:10:15.89:154,16,0	1/1:18,9:24:48.17:463,48,0	1/1:10,6:15:3.69:259,4,0	1/1:7,4:11:12.50:134,13,0	1/1:6,7:13:16.14:168,16,0	./.	1/1:4,3:7:14.71:144,15,0	1/1:7,9:15:28.12:290,28,0	1/1:3,1:3:3.89:36,4,0	1/1:10,3:11:14.05:204,14,0	0/1:13,6:16:2.69:192,0,3	1/1:17,6:22:45.23:435,45,0	1/1:4,4:8:17.92:171,18,0
chr10	29769736	.	AAG	A	724.23	PASS	AB=0.986;AC=29;AF=0.518;AN=56;BaseQRankSum=-1.769;DP=575;FS=27.336;HRun=0;HaplotypeScore=94.7636;InbreedingCoeff=-0.4885;MQ=46.87;MQ0=48;MQRankSum=0.693;QD=1.28;ReadPosRankSum=-1.831;VQSLOD=-0.0865;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:17:21.43:21,0,65	0/1:5,0:3:15.71:16,0,31	0/1:115,1:20:8:8,0,118	0/1:104,0:15:18.39:18,0,58	1/1:14,0:13:6.27:71,6,0	0/1:10,0:9:1.33:1,0,100	0/1:11,0:10:9.91:26,0,10	0/1:32,0:26:52.06:121,0,52	0/0:6,0:5:5.73:0,6,50	0/1:12,2:11:27.71:28,0,76	1/1:12,1:12:6.24:30,6,0	0/1:12,0:12:3.23:3,0,39	0/1:10,0:9:1.34:45,0,1	0/1:10,0:11:2.98:3,0,39	0/1:14,0:14:11.07:11,0,55	0/1:9,1:9:3.08:36,0,3	0/1:26,0:23:7.13:121,0,7	0/1:20,0:19:60.24:102,0,60	0/1:17,0:16:11.40:11,0,195	0/1:9,1:10:23.79:24,0,121	0/1:5,0:4:0.93:1,0,1	1/1:5,0:5:7.04:29,7,0	0/1:14,0:13:27.77:28,0,76	0/0:5,0:4:2.49:0,2,27	0/1:13,0:10:5.11:5,0,66	0/1:21,0:18:20.60:21,0,74	0/1:25,0:24:52.17:52,0,109	0/1:10,0:9:30.01:34,0,30
chr10	29769737	.	AGC	A	2688.38	PASS	AB=0.878;AC=36;AF=0.643;AN=56;BaseQRankSum=-3.051;DP=563;FS=14.697;HRun=0;HaplotypeScore=86.9143;InbreedingCoeff=-0.5381;MQ=47.13;MQ0=46;MQRankSum=1.216;QD=4.78;ReadPosRankSum=-0.775;VQSLOD=1.2187;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:20,2:17:58.89:100,0,59	0/1:4,1:3:17.73:18,0,43	0/1:106,5:20:20.33:20,0,161	0/1:97,4:15:43.16:43,0,66	1/1:14,0:13:23.72:149,24,0	0/1:9,1:9:33.53:34,0,48	1/1:9,2:10:17.45:137,17,0	0/1:27,5:26:41.15:261,0,41	0/1:5,1:5:13.15:13,0,50	0/1:9,5:11:11.17:35,0,11	1/1:4,7:11:8.81:70,9,0	0/1:3,8:11:12.13:12,0,20	1/1:9,0:9:4.82:148,5,0	0/1:8,2:10:7.26:78,0,7	1/1:12,2:14:0.39:167,0,0	1/1:9,1:9:17.36:115,17,0	0/1:25,0:22:0.19:204,0,0	0/1:18,2:19:27.10:121,0,27	0/1:14,2:15:85.60:137,0,86	0/1:9,0:10:55.19:55,0,77	1/1:5,0:4:2.36:34,2,0	1/1:1,4:5:9:85,9,0	0/1:13,1:13:41.95:130,0,42	0/1:5,0:4:7.47:23,0,7	0/1:11,3:11:9.92:114,0,10	0/1:20,1:18:3.55:119,0,4	0/1:21,2:24:29.08:282,0,29	0/1:8,1:9:7.99:133,0,8
chr10	29769739	.	C	CAAA	2757.50	PASS	AB=0.990;AC=42;AF=0.750;AN=56;BaseQRankSum=-0.428;DP=576;FS=5.136;HRun=16;HaplotypeScore=98.3346;InbreedingCoeff=0.2125;MQ=46.06;MQ0=46;MQRankSum=0.639;QD=6.58;ReadPosRankSum=0.730;VQSLOD=0.0126;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:21,0:17:10.45:10,0,91	0/1:5,0:3:0:0,0,0	0/0:110,0:19:21.72:0,22,163	0/1:104,0:18:52.89:68,0,53	1/1:4,7:13:20.93:214,21,0	1/1:5,2:11:23.58:259,24,0	0/1:10,0:10:3.96:117,0,4	1/1:35,0:29:19.18:159,19,0	0/1:7,0:6:23.69:24,0,32	1/1:13,1:11:8.99:97,9,0	1/1:11,0:11:5.88:64,6,0	1/1:11,0:11:5.84:35,6,0	0/1:10,0:9:13.03:61,0,13	1/1:10,0:10:1.51:80,2,0	1/1:15,0:15:0.78:100,1,0	1/1:10,0:10:22.31:188,22,0	0/0:17,0:22:7.35:0,7,191	0/0:21,0:20:13.12:0,13,194	0/1:18,0:17:11.03:40,0,11	1/1:6,1:9:11.79:97,12,0	1/1:5,0:4:6.02:84,6,0	0/1:4,0:4:0.12:69,0,0	1/1:14,1:14:19.65:195,20,0	1/1:4,0:4:2.96:19,3,0	1/1:13,0:11:26.94:273,27,0	1/1:19,0:18:28.43:279,28,0	1/1:23,1:24:9.85:215,10,0	1/1:10,0:9:20.12:165,20,0
chr10	29769866	.	C	CT	707.11	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=3.890;DP=420;FS=4.653;HRun=8;HaplotypeScore=53.6185;InbreedingCoeff=0.7117;MQ=82.19;MQ0=1;MQRankSum=-4.435;QD=10.10;ReadPosRankSum=-0.391;VQSLOD=1.5780;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:18:47.90:0,48,427	0/0:4,0:4:11.96:0,12,101	0/1:41,0:30:8.85:9,0,346	0/0:27,0:19:29.47:0,29,241	0/0:18,0:18:45.02:0,45,412	0/0:10,0:10:24.01:0,24,220	0/0:18,0:17:45.02:0,45,412	0/0:21,0:21:39.01:0,39,357	0/0:9,0:9:17.99:0,18,160	0/0:13,0:13:27.01:0,27,247	0/0:16,0:16:39.02:0,39,357	0/0:9,0:9:21:0,21,187	0/0:6,0:6:12:0,12,109	0/0:13,0:13:36.01:0,36,329	0/0:12,0:11:33.01:0,33,297	0/0:14,0:14:36.01:0,36,325	1/1:5,13:18:48.09:527,48,0	1/1:3,8:11:27.07:298,27,0	0/0:21,0:21:47.95:0,48,426	0/0:7,0:7:15.01:0,15,137	0/0:16,0:16:33:0,33,298	0/0:2,0:2:3:0,3,27	0/0:11,0:11:26.98:0,27,242	0/0:25,0:25:65.97:0,66,588	0/0:11,0:11:27.01:0,27,247	0/0:17,0:17:51.03:0,51,467	0/0:16,0:16:29.54:0,30,320	0/0:16,0:16:30.24:0,30,298
chr10	29769880	.	G	GC	686.16	PASS	AB=0.971;AC=7;AF=0.125;AN=56;BaseQRankSum=2.142;DP=356;FS=8.546;HRun=8;HaplotypeScore=46.0496;InbreedingCoeff=0.7797;MQ=81.69;MQ0=0;MQRankSum=-3.111;QD=9.15;ReadPosRankSum=-0.378;VQSLOD=0.4945;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,19:20:48.14:552,48,0	0/0:4,0:4:5.99:0,6,55	0/1:30,0:25:3.13:3,0,251	0/0:25,0:17:15.46:0,15,150	0/0:17,0:17:36.01:0,36,329	0/0:12,0:12:33.02:0,33,302	0/0:21,0:20:50.99:0,51,456	0/0:13,0:13:23.80:0,24,219	0/0:8,0:8:18.01:0,18,165	0/0:9,0:9:18:0,18,162	0/0:14,0:14:33.01:0,33,302	0/0:7,0:7:15:0,15,137	0/0:4,0:4:12.01:0,12,110	0/0:14,0:14:42.02:0,42,384	0/0:10,0:10:27.01:0,27,247	0/0:11,0:11:27.01:0,27,247	1/1:2,2:13:25.86:155,26,0	1/1:4,1:9:17.37:118,17,0	0/0:14,0:14:39:0,39,350	0/0:6,0:6:18.01:0,18,165	0/0:10,0:10:27.01:0,27,247	0/0:1,0:1:3:0,3,27	0/0:11,0:11:30:0,30,270	0/0:20,0:20:45.02:0,45,412	0/0:10,0:10:30.02:0,30,274	0/0:16,0:16:48.02:0,48,437	0/0:14,0:14:33.01:0,33,302	0/0:8,0:10:23.94:0,24,206
chr10	29769980	.	CA	C	3040.42	PASS	AB=0.705;AC=45;AF=0.833;AN=54;BaseQRankSum=-2.010;DP=283;FS=8.340;HRun=12;HaplotypeScore=49.8070;InbreedingCoeff=0.4938;MQ=79.37;MQ0=0;MQRankSum=0.111;QD=12.41;ReadPosRankSum=3.650;VQSLOD=2.9716;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:29,2:30:1.38:1,0,333	1/1:0,2:2:5.98:46,6,0	0/0:8,0:7:2.96:0,3,19	0/0:17,0:14:8.97:0,9,73	1/1:4,7:11:14.89:116,15,0	1/1:2,4:6:8.93:70,9,0	1/1:4,11:15:32.84:255,33,0	1/1:3,9:12:20.88:162,21,0	0/0:5,0:11:23.05:0,23,127	1/1:1,7:8:20.91:162,21,0	1/1:2,6:8:20.92:162,21,0	1/1:2,8:10:23.88:186,24,0	1/1:4,4:8:11.93:93,12,0	1/1:3,3:6:8.94:70,9,0	1/1:4,12:16:5.83:185,6,0	1/1:3,5:8:14.92:116,15,0	1/1:9,11:21:35.83:279,36,0	1/1:3,10:13:23.90:186,24,0	0/1:3,6:10:4.50:142,0,4	1/1:0,3:3:8.97:70,9,0	1/1:2,3:5:8.95:70,9,0	1/1:0,1:1:2.99:23,3,0	1/1:1,2:3:5.97:46,6,0	1/1:2,12:14:29.88:232,30,0	0/1:3,7:10:6.57:139,0,7	1/1:2,9:11:26.89:209,27,0	1/1:5,8:13:20.88:162,21,0	./.
chr10	29771247	.	G	GT	10660.32	PASS	AB=1.000;AC=49;AF=0.875;AN=56;BaseQRankSum=-8.050;DP=573;FS=3.013;HRun=7;HaplotypeScore=93.5459;InbreedingCoeff=0.8945;MQ=74.70;MQ0=4;MQRankSum=-2.231;QD=21.98;ReadPosRankSum=-1.496;VQSLOD=3.7632;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:79.37:0,79,497	1/1:1,9:11:27.04:304,27,0	0/0:31,0:25:31.48:0,31,328	0/1:25,0:20:1.58:2,0,74	1/1:1,14:15:10.70:406,11,0	1/1:2,20:22:48.15:578,48,0	1/1:1,23:24:54.17:652,54,0	1/1:4,14:18:40.99:467,41,0	0/0:25,0:25:55.94:0,56,347	1/1:4,13:18:42.09:472,42,0	1/1:2,18:20:47.95:512,48,0	1/1:3,16:19:30.09:362,30,0	1/1:4,18:22:49.73:582,50,0	1/1:6,18:24:32.59:396,33,0	1/1:3,15:18:39.12:471,39,0	1/1:1,14:16:33.05:371,33,0	1/1:24,0:24:28.85:251,29,0	1/1:25,0:25:47.97:406,48,0	1/1:4,14:19:44.90:432,45,0	1/1:1,11:13:32.96:342,33,0	1/1:2,19:21:36.11:434,36,0	1/1:2,14:16:40.32:456,40,0	1/1:1,12:13:27.08:326,27,0	1/1:12,20:32:76.40:852,76,0	1/1:3,15:17:36.10:425,36,0	1/1:5,13:18:36.85:365,37,0	1/1:5,22:27:45:543,45,0	1/1:0,7:7:21.06:253,21,0
chr10	29771254	.	T	TTG	4441.31	PASS	AB=0.993;AC=36;AF=0.643;AN=56;BaseQRankSum=-1.019;DP=593;FS=9.286;HRun=0;HaplotypeScore=132.3592;InbreedingCoeff=-0.0507;MQ=71.03;MQ0=4;MQRankSum=-0.672;QD=8.73;ReadPosRankSum=5.863;VQSLOD=3.4502;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:3,0:32:80.79:0,81,662	0/1:14,0:14:11.44:76,0,11	0/0:31,0:25:31.23:0,31,432	0/1:19,0:15:6.33:6,0,83	0/1:17,0:17:45.46:98,0,45	1/1:22,0:22:8.54:144,9,0	0/1:27,0:27:4.53:151,0,5	0/1:20,0:20:14.49:130,0,14	0/0:1,0:21:56.56:0,57,469	0/1:20,0:21:33.57:170,0,34	1/1:22,0:22:27.19:197,27,0	0/1:22,0:22:42.54:77,0,43	1/1:21,0:21:40.46:191,40,0	0/1:21,0:21:7.76:88,0,8	1/1:17,0:17:17.45:130,17,0	1/1:18,0:18:10.74:127,11,0	1/1:1,21:25:33.58:599,34,0	1/1:0,24:26:48.15:864,48,0	0/1:19,0:19:14.51:223,0,15	0/1:15,0:15:5.18:109,0,5	0/1:27,0:27:85.66:86,0,93	1/1:18,0:18:25.78:150,26,0	1/1:14,0:14:17.65:95,18,0	1/1:33,0:33:9.47:285,9,0	0/1:17,0:16:4.29:95,0,4	0/1:21,0:21:59.45:165,0,59	0/1:24,0:24:14.50:124,0,15	1/1:8,0:8:2.07:61,2,0
chr10	29771368	.	A	AGT	1397.50	PASS	AB=0.932;AC=40;AF=0.833;AN=48;BaseQRankSum=1.592;DP=538;FS=1.477;HRun=0;HaplotypeScore=118.9483;InbreedingCoeff=0.0757;MQ=65.32;MQ0=13;MQRankSum=-0.009;QD=2.94;ReadPosRankSum=-1.856;VQSLOD=1.8057;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:12.03:0,12,129	0/1:8,0:8:0:0,0,0	./.	0/1:29,0:29:0:0,0,0	1/1:13,0:12:2.98:24,3,0	1/1:15,0:14:13.56:125,14,0	0/1:29,0:28:0.44:106,0,0	1/1:20,0:18:4.21:24,4,0	0/1:14,0:15:26.55:27,0,38	1/1:14,0:13:6.01:54,6,0	./.	1/1:20,2:22:1.18:63,1,0	1/1:18,4:20:3.90:47,4,0	1/1:25,1:27:5.68:38,6,0	0/1:13,0:18:23.40:43,0,23	1/1:22,0:21:8.98:78,9,0	1/1:14,1:21:12.02:128,12,0	0/1:16,5:21:16.32:91,0,16	1/1:14,0:14:8.98:75,9,0	./.	1/1:45,1:54:3.48:46,3,0	1/1:7,0:7:3.01:43,3,0	./.	1/1:49,0:48:23.76:244,24,0	1/1:7,0:7:3:25,3,0	1/1:19,0:19:13.25:146,13,0	1/1:16,0:16:6:61,6,0	1/1:11,0:9:3:26,3,0
chr10	29772543	.	GC	G	9048.18	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=1.828;DP=427;FS=7.918;HRun=5;HaplotypeScore=50.8228;InbreedingCoeff=0.8915;MQ=77.58;MQ0=0;MQRankSum=-2.672;QD=25.35;ReadPosRankSum=0.226;VQSLOD=3.7393;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,117,1581	1/1:0,6:6:6.02:68,6,0	0/0:8,0:8:17.86:0,18,211	0/0:12,0:12:12.51:0,13,242	1/1:0,8:8:18.05:204,18,0	1/1:0,14:14:33.09:374,33,0	1/1:4,27:31:72.20:816,72,0	1/1:3,10:13:24:248,24,0	0/0:9,0:9:27.09:0,27,369	1/1:1,15:16:45.08:477,45,0	1/1:0,3:3:6.02:68,6,0	1/1:2,18:20:39.11:440,39,0	1/1:2,15:17:39.01:442,39,0	1/1:1,16:17:33.09:374,33,0	1/1:0,7:7:21.06:238,21,0	1/1:0,11:11:27.08:306,27,0	1/1:1,18:19:51.14:578,51,0	1/1:1,22:23:66.19:748,66,0	1/1:1,5:6:18.01:181,18,0	1/1:0,9:9:12.03:133,12,0	1/1:0,38:38:78.22:884,78,0	1/1:1,10:11:21.06:233,21,0	1/1:0,10:10:21.03:235,21,0	1/1:1,25:26:63.18:713,63,0	1/1:0,18:18:42.12:475,42,0	1/1:2,10:12:30.09:339,30,0	1/1:1,15:16:36:408,36,0	1/1:5,1:6:6.01:67,6,0
chr10	29772906	.	TG	T	1587.19	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=3.894;DP=606;FS=1.054;HRun=8;HaplotypeScore=73.6766;InbreedingCoeff=0.9900;MQ=94.95;MQ0=0;MQRankSum=-2.769;QD=23.00;ReadPosRankSum=3.574;VQSLOD=4.3430;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:36:80.62:0,81,418	0/0:7,0:7:21.05:0,21,243	0/0:29,0:30:55.35:0,55,584	0/0:29,0:29:43.46:0,43,600	0/0:20,0:20:51.13:0,51,592	0/0:18,0:18:54.14:0,54,630	0/0:38,0:38:96.27:0,96,1130	0/0:30,0:30:75.02:0,75,883	0/0:8,0:27:34.19:0,34,172	0/0:21,0:21:57.15:0,57,656	0/0:7,0:7:18.06:0,18,217	0/0:27,0:27:78.24:0,78,942	0/0:17,0:17:51.14:0,51,597	0/0:19,0:19:48.12:0,48,557	0/0:24,0:24:60.18:0,60,723	0/0:12,0:12:32.98:0,33,361	1/1:3,40:43:99:985,102,0	1/1:0,26:26:75.12:724,75,0	0/0:22,0:22:54.14:0,54,628	0/0:7,0:7:21.03:0,21,238	0/0:19,0:19:54.14:0,54,628	0/0:14,0:14:30.09:0,30,360	0/0:12,0:12:36.08:0,36,419	0/0:31,0:31:87.25:0,87,1028	0/0:13,0:13:36.03:0,36,406	0/0:20,0:22:44.99:0,45,507	0/0:24,0:24:69.17:0,69,817	0/0:10,0:10:24.07:0,24,290
chr10	29773494	.	CT	C	1511.53	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.729;DP=519;FS=3.457;HRun=5;HaplotypeScore=55.4900;InbreedingCoeff=0.9771;MQ=92.73;MQ0=0;MQRankSum=-5.150;QD=28.52;ReadPosRankSum=0.715;VQSLOD=3.8655;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,33:33:87.25:987,87,0	0/0:6,0:6:18.05:0,18,228	0/0:20,1:21:22.86:0,23,629	0/0:29,0:29:66.18:0,66,809	0/0:18,0:18:48.12:0,48,610	0/0:19,0:19:54.18:0,54,738	0/0:31,0:31:90.25:0,90,1177	0/0:23,0:23:60.20:0,60,818	1/1:0,20:20:57.16:646,57,0	0/0:19,0:19:54.16:0,54,710	0/0:14,0:14:39.12:0,39,513	0/0:26,0:26:75.24:0,75,1010	0/0:14,0:14:42.12:0,42,546	0/0:13,0:13:36.10:0,36,475	0/0:16,0:16:48.14:0,48,626	0/0:13,0:13:39.13:0,39,534	0/0:21,0:21:63.21:0,63,862	0/0:26,0:26:66.19:0,66,874	0/0:19,0:19:48.16:0,48,654	0/0:6,0:6:15.05:0,15,205	0/0:24,0:24:63.20:0,63,850	0/0:8,0:8:24.08:0,24,325	0/0:16,0:16:42.12:0,42,557	0/0:25,0:25:69.23:0,69,944	0/0:12,0:12:30.10:0,30,410	0/0:19,0:19:57.19:0,57,777	0/0:23,0:23:60.20:0,60,821	0/0:5,0:5:15.05:0,15,205
chr10	29773902	.	T	TC	2974.62	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-2.741;DP=609;FS=0.000;HRun=1;HaplotypeScore=70.8722;InbreedingCoeff=0.9679;MQ=77.01;MQ0=0;MQRankSum=-2.143;QD=43.74;ReadPosRankSum=2.058;VQSLOD=3.6098;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,68:68:99:3069,193,0	0/0:10,0:10:30.09:0,30,402	0/0:11,0:11:30.06:0,30,398	0/0:13,0:13:33.10:0,33,448	0/0:19,0:19:54.18:0,54,755	0/0:22,0:22:63.19:0,63,858	0/0:29,0:29:87.28:0,87,1200	0/0:29,0:29:84.27:0,84,1154	0/0:18,0:18:54.17:0,54,740	0/0:15,0:15:45.14:0,45,613	0/0:18,0:18:54.17:0,54,738	0/0:28,0:28:78.25:0,78,1076	0/0:33,0:33:96.32:0,96,1342	0/0:18,0:18:54.18:0,54,748	0/0:16,0:16:42.14:0,42,588	0/0:12,0:12:36.12:0,36,501	0/0:36,0:36:99:0,108,1489	0/0:25,0:25:72.15:0,72,960	0/0:18,0:18:54.18:0,54,751	0/0:18,0:18:54.17:0,54,736	0/0:31,0:31:87.29:0,87,1214	0/0:9,0:9:27.09:0,27,377	0/0:20,0:20:54.17:0,54,738	0/0:34,0:34:96.32:0,96,1343	0/0:12,0:12:36.12:0,36,502	0/0:21,0:21:63.20:0,63,864	0/0:22,0:22:63.20:0,63,862	0/0:4,0:4:12.04:0,12,168
chr10	29774581	.	G	GT	5230.94	PASS	AB=0.775;AC=49;AF=0.875;AN=56;BaseQRankSum=-5.096;DP=556;FS=4.910;HRun=14;HaplotypeScore=69.0748;InbreedingCoeff=0.1812;MQ=71.22;MQ0=4;MQRankSum=0.890;QD=9.87;ReadPosRankSum=-1.088;VQSLOD=4.0125;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,1:21:31.84:161,32,0	0/1:3,2:6:7.43:55,0,7	0/1:24,1:18:11.58:25,0,12	0/1:18,0:15:12.89:13,0,31	1/1:9,19:28:29.51:351,30,0	1/1:6,18:24:16.65:252,17,0	1/1:3,6:10:14.63:120,15,0	1/1:8,18:27:50.78:421,51,0	0/0:5,0:26:39.56:0,40,123	1/1:10,11:22:16.57:259,17,0	0/1:6,9:20:4.08:179,0,4	1/1:3,20:23:18:272,18,0	1/1:4,16:21:33.55:279,34,0	1/1:3,12:15:21:185,21,0	1/1:4,18:24:41.65:340,42,0	1/1:6,15:22:19.57:285,20,0	1/1:7,0:21:25.65:130,26,0	1/1:6,2:17:26.33:147,26,0	1/1:9,11:22:16.87:233,17,0	0/1:10,6:23:8.01:139,0,8	1/1:3,6:11:17.68:134,18,0	1/1:0,8:9:17.76:137,18,0	1/1:6,12:19:4.57:154,5,0	1/1:5,4:9:9:79,9,0	1/1:5,14:20:19.43:203,19,0	1/1:10,13:26:8.86:274,9,0	1/1:8,13:25:5.73:245,6,0	1/1:8,8:18:20.68:160,21,0
chr10	29775079	.	TC	T	443.30	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.872;DP=646;FS=3.545;HRun=3;HaplotypeScore=60.1836;InbreedingCoeff=0.9988;MQ=84.49;MQ0=0;MQRankSum=-2.778;QD=27.71;ReadPosRankSum=1.189;VQSLOD=2.7606;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,15:16:45.07:538,45,0	0/0:9,0:9:27.06:0,27,366	0/0:19,0:19:57.18:0,57,775	0/0:21,0:21:57.12:0,57,775	0/0:35,0:35:99:0,105,1439	0/0:25,0:25:72.21:0,72,999	0/0:17,0:17:51.17:0,51,734	0/0:23,0:23:66.22:0,66,935	0/0:23,0:23:69.22:0,69,960	0/0:27,0:27:79.08:0,79,1099	0/0:37,0:37:99:0,111,1561	0/0:30,0:30:87.26:0,87,1204	0/0:20,0:20:60.19:0,60,839	0/0:13,0:13:36.12:0,36,518	0/0:19,0:19:57.19:0,57,820	0/0:27,0:27:81.26:0,81,1148	0/0:33,0:33:90.23:0,90,1249	0/0:15,0:15:42.11:0,42,572	0/0:21,0:21:63.19:0,63,868	0/0:23,0:23:66.18:0,66,917	0/0:17,0:17:51.17:0,51,734	0/0:28,0:28:84.26:0,84,1175	0/0:25,0:25:75.22:0,75,1026	0/0:17,0:17:48.15:0,48,673	0/0:17,0:17:51.14:0,51,698	0/0:33,0:33:93.27:0,93,1283	0/0:35,0:35:99:0,105,1492	0/0:21,0:20:60.17:0,60,825
chr10	29775440	.	CTA	C	1241.32	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=8.781;DP=666;FS=0.000;HRun=0;HaplotypeScore=82.1677;InbreedingCoeff=0.9998;MQ=89.36;MQ0=0;MQRankSum=-5.823;QD=40.04;ReadPosRankSum=1.188;VQSLOD=5.3173;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,30:31:84.18:1336,84,0	0/0:13,0:13:39.10:0,39,740	0/0:22,0:22:52.43:0,52,1187	0/0:30,0:30:87.22:0,87,1583	0/0:40,0:40:99:0,117,2312	0/0:27,0:27:81.28:0,81,1585	0/0:24,0:24:72.25:0,72,1427	0/0:20,0:20:60.21:0,60,1199	0/0:23,0:23:69.24:0,69,1358	0/0:20,0:20:57.19:0,57,1116	0/0:33,0:33:99:0,99,1958	0/0:23,0:23:69.24:0,69,1376	0/0:32,0:32:93.32:0,93,1842	0/0:20,0:20:60.19:0,60,1153	0/0:28,0:28:84.29:0,84,1599	0/0:19,0:19:57.20:0,57,1130	0/0:21,0:21:60.20:0,60,1182	0/0:14,0:14:42.14:0,42,819	0/0:25,0:25:72.25:0,72,1412	0/0:28,0:28:81.26:0,81,1572	0/0:27,0:27:81.28:0,81,1619	0/0:23,0:23:69.24:0,69,1350	0/0:18,0:18:54.19:0,54,1066	0/0:18,0:18:54.19:0,54,1050	0/0:23,0:23:69.24:0,69,1348	0/0:27,0:27:81.28:0,81,1613	0/0:25,0:25:75.26:0,75,1487	0/0:12,0:12:36.12:0,36,719
chr10	29775868	.	C	CT	615.26	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-1.072;DP=472;FS=1.834;HRun=3;HaplotypeScore=52.1090;InbreedingCoeff=0.9430;MQ=79.37;MQ0=0;MQRankSum=-1.755;QD=34.18;ReadPosRankSum=0.185;VQSLOD=3.8719;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,18:18:51.17:710,51,0	0/0:7,0:7:21.03:0,21,236	0/0:27,0:22:15.41:0,15,391	0/0:16,0:10:13.93:0,14,160	0/0:21,0:21:60.17:0,60,708	0/0:24,0:24:69.20:0,69,816	0/0:9,0:9:27.07:0,27,313	0/0:32,0:32:93.21:0,93,1039	0/0:9,0:9:27.08:0,27,323	0/0:19,0:19:15.19:0,15,555	0/0:20,0:20:57.17:0,57,682	0/0:10,0:10:30.06:0,30,335	0/0:12,0:12:33.09:0,33,383	0/0:13,0:13:39.11:0,39,456	0/0:22,0:22:57.13:0,57,659	0/0:16,0:16:45.12:0,45,521	0/0:11,0:11:23.80:0,24,278	0/0:14,0:14:39.07:0,39,440	0/0:24,0:24:69.18:0,69,798	0/0:19,0:19:54.08:0,54,593	0/0:12,0:12:36.09:0,36,419	0/0:16,0:16:48.12:0,48,553	0/0:10,0:10:30.08:0,30,348	0/0:16,0:17:47.34:0,47,532	0/0:10,0:10:30.08:0,30,348	0/0:24,0:24:66.11:0,66,719	0/0:19,0:19:57.17:0,57,682	0/0:21,0:21:57.07:0,57,616
chr10	29775942	.	AT	A	1254.41	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.546;DP=489;FS=2.218;HRun=2;HaplotypeScore=46.0012;InbreedingCoeff=0.9508;MQ=75.19;MQ0=0;MQRankSum=-2.626;QD=33.90;ReadPosRankSum=1.542;VQSLOD=3.5100;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:81.28:0,81,1285	0/0:3,0:3:9.03:0,9,144	0/0:9,0:9:11.36:0,11,258	0/0:9,0:9:21.07:0,21,336	0/0:20,0:20:60.20:0,60,959	0/0:26,0:26:78.27:0,78,1247	0/0:16,0:16:48.16:0,48,767	0/0:34,0:34:99:0,102,1572	0/0:20,0:20:60.20:0,60,959	0/0:22,0:22:66.23:0,66,1055	0/0:18,0:18:54.17:0,54,835	0/0:12,0:12:36.12:0,36,575	0/0:18,0:18:54.18:0,54,861	0/0:17,0:17:51.17:0,51,803	0/0:18,0:18:54.18:0,54,861	0/0:13,0:13:39.12:0,39,600	1/1:1,19:20:50.80:750,51,0	1/1:0,17:17:45.15:626,45,0	0/0:18,0:18:51.16:0,51,784	0/0:10,0:10:30.10:0,30,480	0/0:15,0:15:45.15:0,45,710	0/0:11,0:11:33.11:0,33,528	0/0:9,0:9:27.09:0,27,432	0/0:15,0:15:45.15:0,45,719	0/0:19,0:19:57.19:0,57,906	0/0:28,0:28:84.29:0,84,1343	0/0:26,0:26:78.25:0,78,1223	0/0:17,0:17:51.17:0,51,815
chr10	29776945	.	TTC	T	4719.84	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=1.467;DP=577;FS=12.405;HRun=0;HaplotypeScore=125.4863;InbreedingCoeff=0.8469;MQ=76.94;MQ0=1;MQRankSum=-7.274;QD=8.76;ReadPosRankSum=5.686;VQSLOD=3.1896;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:24,1:25:50.88:428,51,0	1/1:12,0:12:25.65:108,26,0	0/0:20,0:19:45.46:0,45,489	0/0:18,0:18:1.03:0,1,309	1/1:30,0:30:56.97:316,57,0	1/1:19,1:20:28.19:179,28,0	1/1:27,0:27:47.27:213,47,0	1/1:28,0:28:23.43:234,23,0	1/1:20,0:20:44.79:153,45,0	1/1:23,1:24:59.11:273,59,0	1/1:21,2:23:48.79:239,49,0	1/1:18,0:18:34.81:119,35,0	1/1:20,1:21:42.44:177,42,0	1/1:20,0:20:36.81:128,37,0	1/1:16,0:16:34.69:118,35,0	1/1:17,0:17:34.93:120,35,0	1/1:29,0:29:50.05:172,50,0	1/1:17,0:17:22.21:77,22,0	1/1:17,0:17:22.89:149,23,0	1/1:25,0:25:61.30:252,61,0	1/1:10,0:10:24.95:85,25,0	1/1:12,1:13:30.46:135,30,0	1/1:34,0:34:67:246,67,0	1/1:19,0:19:29.70:102,30,0	1/1:22,0:22:49.10:168,49,0	1/1:19,0:19:47.28:221,47,0	1/1:26,2:28:59.88:269,60,0	1/1:5,0:5:12.48:43,12,0
chr10	29776946	.	TC	T	18120.56	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-5.718;DP=574;FS=14.382;HRun=1;HaplotypeScore=66.7697;InbreedingCoeff=0.8984;MQ=76.06;MQ0=1;MQRankSum=-7.382;QD=33.81;ReadPosRankSum=6.100;VQSLOD=3.1006;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,23:25:53.92:669,54,0	1/1:0,12:12:30.01:373,30,0	0/0:21,0:21:55.76:0,56,560	0/0:14,1:16:10.09:0,10,316	1/1:1,29:30:80.83:1009,81,0	1/1:5,15:20:53.84:715,54,0	1/1:2,24:26:72.80:1023,73,0	1/1:3,25:28:62.33:912,62,0	1/1:0,20:20:54.18:750,54,0	1/1:1,23:24:69.17:904,69,0	1/1:2,21:23:56.88:718,57,0	1/1:0,18:18:42.14:584,42,0	1/1:1,18:19:51.04:682,51,0	1/1:0,20:20:45.15:626,45,0	1/1:0,16:16:42.14:583,42,0	1/1:0,17:17:42.14:584,42,0	1/1:1,28:29:63.21:863,63,0	1/1:1,16:17:4.23:349,4,0	1/1:5,14:19:48.70:649,49,0	1/1:0,25:25:75.05:935,75,0	1/1:0,10:10:30.10:417,30,0	1/1:1,12:13:35.99:474,36,0	1/1:1,33:34:81.02:1116,81,0	1/1:0,19:19:36.12:500,36,0	1/1:0,22:22:60.20:831,60,0	1/1:0,18:18:54.14:699,54,0	1/1:2,25:27:71.97:946,72,0	1/1:0,5:5:15.05:209,15,0
chr10	29777498	.	G	GCCC	20124.79	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-4.696;DP=551;FS=8.067;HRun=7;HaplotypeScore=84.9061;InbreedingCoeff=0.9511;MQ=65.41;MQ0=0;MQRankSum=-6.847;QD=38.63;ReadPosRankSum=4.182;VQSLOD=3.5973;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,21:27:66.16:1242,66,0	1/1:2,3:6:9.03:185,9,0	0/0:18,0:16:15.79:0,16,336	0/0:12,0:12:30.08:0,30,399	1/1:6,8:16:27.03:453,27,0	1/1:5,21:29:63.19:1245,63,0	1/1:8,17:27:48.14:933,48,0	1/1:15,0:25:24.08:362,24,0	1/1:5,0:18:36.12:518,36,0	1/1:4,26:29:78.27:1589,78,0	1/1:3,17:21:45.15:931,45,0	1/1:8,16:28:42.03:792,42,0	1/1:5,18:23:57.20:1171,57,0	1/1:6,14:20:42.14:871,42,0	1/1:9,15:25:39.11:722,39,0	1/1:4,16:21:42.14:827,42,0	1/1:1,1:17:39.13:580,39,0	1/1:6,0:10:15.05:216,15,0	1/1:4,10:15:37.01:709,37,0	1/1:8,16:25:48.16:979,48,0	1/1:3,11:14:24.08:496,24,0	1/1:1,15:18:36.12:746,36,0	1/1:3,11:17:39.11:769,39,0	1/1:2,14:16:42.14:870,42,0	1/1:1,18:21:45.13:888,45,0	1/1:9,14:23:42.12:789,42,0	1/1:3,16:20:39.13:808,39,0	1/1:0,8:8:21.07:436,21,0
chr10	29779120	.	T	TTATTTTATATAT	2673.82	PASS	AC=40;AF=0.870;AN=46;BaseQRankSum=-1.654;DP=114;FS=7.976;HRun=0;HaplotypeScore=33.8807;InbreedingCoeff=0.4583;MQ=93.38;MQ0=6;MQRankSum=-2.507;QD=30.38;ReadPosRankSum=1.675;VQSLOD=0.6077;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,0:7:11.96:131,12,0	1/1:1,0:1:3.01:49,3,0	0/0:8,0:7:14.54:0,15,182	0/0:12,0:5:5.84:0,6,72	1/1:4,0:4:6.01:88,6,0	0/0:2,0:2:2.88:0,3,15	1/1:4,0:4:12.01:176,12,0	1/1:5,0:5:14.98:127,15,0	1/1:2,0:2:2.04:6,2,0	1/1:4,0:4:12.02:120,12,0	./.	./.	1/1:1,0:1:3.01:40,3,0	./.	1/1:1,0:1:3.01:64,3,0	1/1:2,0:2:5.98:49,6,0	1/1:3,0:8:6.02:145,6,0	1/1:7,1:16:9.03:416,9,0	1/1:4,0:4:12.04:218,12,0	1/1:8,0:8:21.06:383,21,0	1/1:2,0:2:6.02:126,6,0	1/1:3,0:3:9.02:154,9,0	./.	./.	1/1:4,0:4:9.03:170,9,0	1/1:2,0:2:6.01:92,6,0	1/1:4,0:4:12.02:179,12,0	1/1:2,0:1:3.01:62,3,0
chr10	29779123	.	TA	T	1398.40	PASS	AB=0.786;AC=36;AF=0.783;AN=46;BaseQRankSum=0.026;DP=98;FS=7.981;HRun=1;HaplotypeScore=20.4388;InbreedingCoeff=0.3497;MQ=97.60;MQ0=6;MQRankSum=-1.059;QD=20.27;ReadPosRankSum=0.604;VQSLOD=2.9849;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,7:7:12.04:146,12,0	1/1:1,0:1:2.98:22,3,0	0/0:8,0:7:14.81:0,15,152	0/1:12,0:5:7.31:7,0,21	1/1:0,2:2:6.02:73,6,0	0/0:1,0:1:2.96:0,3,19	1/1:0,4:4:12.04:144,12,0	1/1:0,5:5:15.05:181,15,0	1/1:0,0:2:2.94:18,3,0	1/1:1,3:4:9.50:109,9,0	./.	./.	1/1:0,1:1:3.01:36,3,0	./.	1/1:0,1:1:3.01:36,3,0	1/1:1,1:2:1.72:4,2,0	0/0:9,1:8:5.60:0,6,48	0/0:10,0:8:2.90:0,3,16	0/1:1,3:4:25.51:84,0,26	1/1:3,4:7:18.91:196,19,0	1/1:0,2:2:6.02:73,6,0	1/1:0,3:3:9.03:108,9,0	./.	./.	1/1:0,4:4:9.03:109,9,0	1/1:1,1:2:3.48:38,3,0	1/1:1,3:4:10.27:112,10,0	1/1:1,1:1:3.01:36,3,0
chr10	29779832	.	GC	G	15347.76	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=2.004;DP=512;FS=1.111;HRun=3;HaplotypeScore=52.4076;InbreedingCoeff=0.9976;MQ=90.57;MQ0=0;MQRankSum=-7.040;QD=34.26;ReadPosRankSum=3.934;VQSLOD=5.2216;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:69.23:0,69,993	1/1:0,10:10:30.09:372,30,0	0/0:21,0:21:42.66:0,43,790	0/0:18,0:18:54.13:0,54,724	1/1:1,21:22:63.20:781,63,0	1/1:0,26:26:72.23:893,72,0	1/1:0,11:11:33.10:409,33,0	1/1:1,31:32:93.29:1153,93,0	1/1:1,14:15:39.12:484,39,0	1/1:0,19:19:57.17:695,57,0	1/1:0,13:13:36.11:446,36,0	1/1:1,23:24:63.20:781,63,0	1/1:1,15:16:39.12:484,39,0	1/1:1,10:11:30.09:372,30,0	1/1:0,24:24:66.21:818,66,0	1/1:0,16:16:48.15:595,48,0	1/1:0,27:27:78.24:967,78,0	1/1:0,15:15:39.12:483,39,0	1/1:0,18:18:54.17:668,54,0	1/1:2,18:20:48.15:595,48,0	1/1:0,20:20:57.18:707,57,0	1/1:0,10:10:21.07:260,21,0	1/1:0,12:12:30.09:372,30,0	1/1:0,13:13:36.11:446,36,0	1/1:0,20:20:54.17:670,54,0	1/1:1,17:18:51.16:632,51,0	1/1:0,25:25:72.23:893,72,0	1/1:0,11:11:30.09:372,30,0
chr10	29780046	.	GAAAAC	G	1532.50	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.209;DP=461;FS=0.000;HRun=0;HaplotypeScore=91.4313;InbreedingCoeff=0.7587;MQ=84.75;MQ0=1;MQRankSum=-3.383;QD=47.89;ReadPosRankSum=1.016;VQSLOD=3.4212;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,31:32:75.26:1627,75,0	0/0:6,0:6:15.05:0,15,476	0/0:35,0:34:62.97:0,63,1992	0/0:23,0:20:48.16:0,48,1213	0/0:12,0:12:33.10:0,33,908	0/0:21,0:21:63.21:0,63,1898	0/0:20,0:20:57.19:0,57,1732	0/0:35,0:35:96.32:0,96,2842	0/0:14,0:14:42.14:0,42,1332	0/0:13,0:13:36.12:0,36,1142	0/0:6,0:6:18.06:0,18,472	0/0:16,0:16:48.16:0,48,1507	0/0:16,0:16:42.62:0,43,1273	0/0:6,0:6:18.06:0,18,543	0/0:17,0:17:45.15:0,45,1418	0/0:14,0:14:42.14:0,42,1328	0/0:25,0:25:72.25:0,72,2274	0/0:15,0:15:45.15:0,45,1265	0/0:18,0:18:54.17:0,54,1522	0/0:1,0:1:3.01:0,3,95	0/0:26,0:26:69.24:0,69,2163	0/0:2,0:2:6.02:0,6,137	0/0:9,0:9:27.09:0,27,846	0/0:15,0:15:42.14:0,42,1332	0/0:13,0:13:39.13:0,39,1211	0/0:14,0:14:42.14:0,42,1317	0/0:19,0:19:57.20:0,57,1780	0/0:17,0:17:51.17:0,51,1563
chr10	29780317	.	T	TTATATA	7480.44	PASS	AC=48;AF=0.923;AN=52;BaseQRankSum=-3.231;DP=218;FS=1.703;HRun=0;HaplotypeScore=62.4775;InbreedingCoeff=0.2751;MQ=78.12;MQ0=2;MQRankSum=-2.778;QD=40.43;ReadPosRankSum=0.863;VQSLOD=4.0703;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:15:18.01:271,18,0	1/1:3,1:4:6.02:168,6,0	0/0:14,0:11:3.37:0,3,26	0/0:16,0:12:6.90:0,7,33	1/1:9,2:11:15.05:362,15,0	1/1:6,4:11:23.97:643,24,0	1/1:1,1:2:3.01:95,3,0	1/1:29,4:33:84.25:1923,84,0	1/1:3,0:4:3.01:30,3,0	1/1:3,0:3:3.01:57,3,0	1/1:3,0:3:2.98:21,3,0	1/1:7,0:6:3.01:50,3,0	1/1:3,1:4:3.01:94,3,0	1/1:1,3:4:9.03:283,9,0	1/1:2,3:5:12.03:300,12,0	1/1:4,0:4:3.01:95,3,0	1/1:11,1:12:19.65:294,20,0	1/1:6,2:8:18.04:419,18,0	1/1:5,2:7:12.04:332,12,0	1/1:1,2:3:6.02:187,6,0	./.	./.	1/1:8,0:8:3.01:50,3,0	1/1:0,2:2:3.01:94,3,0	1/1:5,3:8:18.06:539,18,0	1/1:1,1:2:3.01:96,3,0	1/1:4,5:9:3.68:547,4,0	1/1:12,3:15:18.06:530,18,0
chr10	29780330	.	C	CAT	3825.30	PASS	AB=0.888;AC=46;AF=0.920;AN=50;BaseQRankSum=-2.888;DP=204;FS=0.000;HRun=0;HaplotypeScore=53.5293;InbreedingCoeff=0.1792;MQ=66.75;MQ0=3;MQRankSum=-1.174;QD=19.32;ReadPosRankSum=1.010;VQSLOD=3.2023;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:13,2:15:20.42:259,20,0	1/1:0,4:5:2.92:45,3,0	0/1:8,0:5:1.84:2,0,2	0/1:14,0:9:7.43:12,0,7	1/1:4,5:9:8.74:77,9,0	1/1:3,7:10:18.03:231,18,0	1/1:1,1:2:6.02:91,6,0	1/1:15,20:35:82.50:1127,83,0	1/1:3,1:3:6.02:97,6,0	1/1:2,0:2:3.01:50,3,0	1/1:4,0:4:3.01:48,3,0	0/1:3,2:4:0:0,0,0	1/1:0,1:1:3.01:44,3,0	1/1:1,3:4:12.04:180,12,0	1/1:3,3:6:12.04:168,12,0	./.	1/1:5,9:14:12:149,12,0	1/1:4,4:9:12.04:169,12,0	1/1:4,2:6:15.05:225,15,0	1/1:0,4:4:6.02:84,6,0	./.	./.	0/1:4,0:4:0:0,0,0	1/1:0,2:2:3.01:44,3,0	1/1:2,8:11:18:231,18,0	1/1:1,1:2:6.02:95,6,0	1/1:1,8:9:14.89:223,15,0	1/1:3,8:11:15.02:175,15,0
chr10	29780338	.	T	TA	865.27	PASS	AB=0.936;AC=22;AF=0.407;AN=54;BaseQRankSum=5.886;DP=210;FS=8.355;HRun=1;HaplotypeScore=56.0142;InbreedingCoeff=-0.0425;MQ=64.97;MQ0=3;MQRankSum=-2.563;QD=5.69;ReadPosRankSum=4.708;VQSLOD=0.4784;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:10,0:10:35.87:36,0,48	1/1:6,0:6:0.47:1,0,0	0/0:7,0:4:4.18:0,4,31	0/1:14,0:8:6.96:7,0,16	1/1:5,2:7:1.46:41,1,0	0/1:9,2:11:24.47:106,0,24	0/0:4,0:4:4.44:0,4,58	0/1:24,7:31:25.05:377,0,25	1/1:3,0:2:2.70:7,3,0	0/0:4,0:4:3.02:0,3,75	0/0:3,2:5:1.60:0,2,37	0/0:3,1:3:3.01:0,3,40	0/1:1,0:1:0:0,0,0	0/0:5,0:5:1.67:0,2,37	1/1:4,0:4:4.73:51,5,0	0/0:5,0:4:2.97:0,3,20	0/1:12,1:13:44.96:45,0,70	1/1:6,1:7:2.25:67,2,0	0/1:9,1:10:31.19:31,0,160	0/1:8,0:8:26.79:27,0,108	0/0:3,0:3:5.99:0,6,49	./.	0/0:1,0:1:3.01:0,3,40	0/0:4,0:4:5.79:0,6,60	0/1:10,2:12:44.52:78,0,45	0/1:4,0:4:0.23:0,0,35	0/0:15,0:15:12.30:0,12,132	1/1:8,3:11:9.97:129,10,0
chr10	29781936	.	A	AT	12205.77	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-5.545;DP=446;FS=9.862;HRun=7;HaplotypeScore=42.9388;InbreedingCoeff=0.9620;MQ=81.24;MQ0=0;MQRankSum=-6.770;QD=28.86;ReadPosRankSum=4.104;VQSLOD=4.7949;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:36:89.21:459,89,0	1/1:1,5:6:15.05:181,15,0	0/0:9,0:9:18:0,18,164	0/0:14,0:14:29.87:0,30,272	1/1:1,15:16:48.05:546,48,0	1/1:2,16:18:42.13:507,42,0	1/1:1,13:14:36.11:435,36,0	1/1:7,24:31:72.22:870,72,0	1/1:0,11:11:30.09:362,30,0	1/1:4,17:21:51.16:616,51,0	1/1:2,16:18:45.14:544,45,0	1/1:2,13:16:42.13:507,42,0	1/1:1,8:9:21.06:254,21,0	1/1:1,5:6:15.05:181,15,0	1/1:2,16:18:45.14:544,45,0	1/1:1,14:15:35.93:435,36,0	1/1:4,25:29:69.21:833,69,0	1/1:2,11:13:36.10:425,36,0	1/1:2,12:14:36.09:413,36,0	1/1:2,15:17:45.14:544,45,0	1/1:2,8:10:24.07:290,24,0	1/1:1,6:7:15.05:181,15,0	1/1:1,7:8:21.06:254,21,0	1/1:0,16:16:42.13:506,42,0	1/1:1,17:18:48.15:580,48,0	1/1:3,21:24:63.19:761,63,0	1/1:5,21:25:63.19:761,63,0	1/1:0,6:6:18.06:217,18,0
chr10	29782065	.	A	AT	3494.90	PASS	AB=1.000;AC=49;AF=0.875;AN=56;BaseQRankSum=-3.046;DP=441;FS=0.000;HRun=8;HaplotypeScore=73.8008;InbreedingCoeff=0.4440;MQ=74.20;MQ0=3;MQRankSum=0.896;QD=8.11;ReadPosRankSum=2.540;VQSLOD=1.1112;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:19:46.97:304,47,0	1/1:5,0:5:12.41:82,12,0	0/1:42,0:14:3.48:3,0,106	0/1:24,0:11:5.49:5,0,52	1/1:20,0:20:8.40:85,8,0	1/1:20,0:20:12.07:93,12,0	1/1:7,0:7:12.86:91,13,0	1/1:23,0:23:47.70:332,48,0	0/0:7,0:7:15.96:0,16,141	1/1:19,2:21:38.70:244,39,0	1/1:16,0:16:30.85:157,31,0	1/1:8,1:9:15.59:116,16,0	1/1:4,0:4:8.11:53,8,0	1/1:7,0:7:11.75:60,12,0	1/1:11,1:12:24.46:150,24,0	1/1:8,1:9:13.22:94,13,0	1/1:32,4:36:57.33:340,57,0	1/1:20,1:21:36.89:247,37,0	1/1:15,1:16:29.97:180,30,0	0/1:12,0:12:1.15:48,0,1	1/1:3,0:3:4.52:24,5,0	0/0:3,0:3:0.47:0,0,1	1/1:11,0:11:22.35:129,22,0	1/1:10,0:10:10.95:69,11,0	1/1:18,0:18:27.56:134,28,0	1/1:21,0:21:35.65:166,36,0	1/1:27,1:27:37.62:198,38,0	1/1:17,0:17:5.59:92,6,0
chr10	29782525	.	T	TACAC	202.40	PASS	AB=0.981;AC=10;AF=0.200;AN=50;BaseQRankSum=-0.170;DP=562;FS=0.987;HRun=0;HaplotypeScore=133.7795;InbreedingCoeff=0.3133;MQ=55.46;MQ0=10;MQRankSum=-1.468;QD=1.25;ReadPosRankSum=-1.769;VQSLOD=2.4314;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:26,8:41:13.34:154,13,0	0/0:7,0:7:15.05:0,15,195	./.	./.	0/1:15,0:15:10.11:10,0,101	0/0:19,0:19:0.38:0,0,189	0/0:24,0:24:5.83:0,6,70	1/1:29,0:24:5.85:35,6,0	1/1:11,6:17:4.57:74,5,0	0/0:12,0:12:0.81:0,1,11	0/1:9,0:9:12.94:13,0,98	0/0:9,0:8:15.04:0,15,180	0/0:23,0:23:24.85:0,25,301	0/0:21,0:21:27.96:0,28,321	0/0:37,0:36:26.71:0,27,298	0/1:22,0:24:44.31:44,0,260	0/0:24,0:24:36.20:0,36,403	0/0:19,0:20:26.77:0,27,251	0/0:13,0:14:18.04:0,18,186	0/0:20,0:20:23.84:0,24,225	0/0:26,0:24:21.03:0,21,212	0/0:18,0:18:3.96:0,4,216	0/0:14,0:14:12.04:0,12,141	0/0:36,0:35:17.64:0,18,425	0/0:9,0:9:14.96:0,15,164	0/1:24,0:24:8.90:9,0,182	0/0:14,0:14:27.01:0,27,316	./.
chr10	29782562	.	ACACT	A	5298.43	PASS	AB=0.990;AC=28;AF=0.500;AN=56;BaseQRankSum=-10.857;DP=769;FS=14.185;HRun=0;HaplotypeScore=159.6930;InbreedingCoeff=-0.6695;MQ=54.98;MQ0=27;MQRankSum=1.591;QD=7.78;ReadPosRankSum=-6.851;VQSLOD=0.3006;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:41,0:41:96.96:157,0,97	0/1:9,0:9:60.50:60,0,218	0/0:37,0:15:36.53:0,37,449	0/0:51,0:16:25.32:0,25,380	0/1:20,0:20:99:223,0,175	0/1:26,0:26:99:145,0,281	0/1:24,0:24:99:236,0,177	0/1:33,0:27:7.21:442,0,7	0/1:23,0:22:99:112,0,112	0/1:25,0:20:76.37:262,0,76	0/1:17,0:17:95.09:95,0,191	0/1:24,0:23:99:265,0,161	0/1:29,0:28:99:187,0,400	0/1:29,0:28:99:166,0,411	0/1:33,1:33:41.68:42,0,55	0/1:40,0:39:99:423,0,273	0/1:24,2:25:39.44:371,0,39	0/1:26,1:27:58.18:58,0,68	1/1:25,1:22:36.79:410,37,0	0/1:19,2:21:20.33:53,0,20	1/1:47,2:46:26.48:634,26,0	0/1:17,0:16:19.64:20,0,261	0/1:14,0:14:53.66:54,0,166	0/1:42,1:41:99:181,0,655	0/1:17,0:17:99:153,0,186	0/1:24,0:24:99:121,0,449	0/1:36,0:34:99:349,0,272	0/1:7,0:6:0.62:78,0,1
chr10	29782564	.	ACT	A	8218.31	PASS	AB=0.962;AC=38;AF=0.679;AN=56;BaseQRankSum=-7.528;DP=766;FS=13.510;HRun=0;HaplotypeScore=128.0854;InbreedingCoeff=-0.1720;MQ=56.04;MQ0=27;MQRankSum=2.510;QD=12.19;ReadPosRankSum=-1.624;VQSLOD=3.6119;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:36,0:37:7.42:177,7,0	0/1:9,0:9:64.02:64,0,68	0/0:39,0:17:44.57:0,45,480	0/0:53,0:18:24.53:0,25,367	1/1:20,0:20:6.35:282,6,0	0/1:23,2:26:51.44:254,0,51	1/1:22,0:22:6.03:282,6,0	1/1:33,0:27:68.72:560,69,0	0/1:24,0:23:1.68:183,0,2	1/1:24,0:19:25.84:319,26,0	0/1:17,0:17:44.89:168,0,45	0/1:23,1:23:32.49:330,0,32	0/1:28,1:28:87.77:280,0,88	0/1:26,3:28:99:297,0,107	1/1:3,31:33:24.02:313,24,0	0/1:40,2:41:12.59:577,0,13	1/1:19,7:25:68.88:679,69,0	1/1:5,22:27:1.43:238,1,0	1/1:9,17:22:53.89:506,54,0	1/1:2,19:21:21.05:275,21,0	1/1:43,3:43:99:870,99,0	0/1:15,2:16:78.57:105,0,79	0/1:15,0:15:58.62:76,0,59	0/1:40,0:38:99:239,0,192	0/1:15,1:16:40.28:198,0,40	0/1:27,0:27:99:267,0,134	0/1:33,2:33:66.75:513,0,67	1/1:8,0:7:20.93:165,21,0
chr10	29782662	.	GAAGA	G	25274.09	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=12.480;DP=806;FS=9.383;HRun=0;HaplotypeScore=168.8716;InbreedingCoeff=0.9998;MQ=85.61;MQ0=0;MQRankSum=-6.128;QD=52.00;ReadPosRankSum=3.023;VQSLOD=5.5538;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:93.26:0,93,2512	1/1:0,10:10:27.09:565,27,0	0/0:31,0:31:84.20:0,84,2203	0/0:29,0:29:83.02:0,83,1976	1/1:0,28:28:72.02:1292,72,0	1/1:0,29:29:78.22:1590,78,0	1/1:0,25:25:60.16:1213,60,0	1/1:0,24:23:66.14:1122,66,0	0/0:36,0:36:99:0,108,2928	1/1:0,33:33:96.33:2000,96,0	1/1:0,13:13:36.08:709,36,0	1/1:0,33:33:90.27:1837,90,0	1/1:0,34:34:81.28:1686,81,0	1/1:0,29:29:69.15:1398,69,0	0/0:53,0:53:99:0,154,4360	1/1:0,34:34:87.30:1823,87,0	0/0:27,0:27:81.28:0,81,2286	0/0:30,0:30:84.29:0,84,2390	0/0:21,0:21:60.19:0,60,1628	0/0:25,0:25:75.26:0,75,2125	0/0:37,0:37:99:0,111,3025	1/1:0,31:31:81.22:1643,81,0	1/1:0,28:28:66.23:1381,66,0	1/1:0,32:32:69.24:1445,69,0	1/1:0,24:24:66.17:1338,66,0	1/1:1,27:28:81.27:1645,81,0	1/1:0,36:36:93.28:1897,93,0	1/1:0,15:15:33.11:690,33,0
chr10	29783537	.	C	CT	14957.17	PASS	AB=0.943;AC=51;AF=0.911;AN=56;BaseQRankSum=-5.947;DP=705;FS=2.535;HRun=9;HaplotypeScore=102.6494;InbreedingCoeff=0.5832;MQ=69.88;MQ0=1;MQRankSum=-2.735;QD=23.01;ReadPosRankSum=3.407;VQSLOD=5.0277;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:21:56.02:0,56,474	1/1:2,10:12:27.07:299,27,0	0/0:33,0:24:11.57:0,12,240	0/1:30,0:18:14.30:14,0,72	1/1:9,40:50:99:1235,117,0	1/1:2,24:26:49.15:770,49,0	1/1:6,10:16:1.09:240,1,0	1/1:6,23:29:66.12:690,66,0	1/1:3,22:25:31.11:571,31,0	1/1:5,25:31:74.99:797,75,0	1/1:4,18:23:14.56:563,15,0	1/1:3,11:15:23.90:247,24,0	1/1:7,18:25:30.93:552,31,0	1/1:2,18:20:54.15:596,54,0	1/1:3,17:20:48.13:531,48,0	1/1:7,20:27:17.08:632,17,0	1/1:9,23:32:3.02:698,3,0	1/1:6,22:28:62.64:662,63,0	1/1:5,13:20:44.79:459,45,0	1/1:3,29:32:84.19:916,84,0	1/1:3,12:15:11.42:340,11,0	1/1:7,11:18:24.06:266,24,0	1/1:4,29:33:49.14:770,49,0	1/1:4,16:20:39.11:431,39,0	1/1:5,17:22:2.04:479,2,0	1/1:3,24:27:69.19:763,69,0	1/1:4,25:30:65.23:757,65,0	1/1:0,20:21:63:678,63,0
chr10	29784879	.	C	CTCTCTCTG	14846.78	PASS	AB=0.524;AC=49;AF=0.875;AN=56;BaseQRankSum=-7.298;DP=781;FS=0.000;HRun=0;HaplotypeScore=153.0921;InbreedingCoeff=0.4940;MQ=57.83;MQ0=18;MQRankSum=-2.579;QD=24.34;ReadPosRankSum=2.798;VQSLOD=4.0199;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:36:19.59:0,20,79	1/1:1,8:10:7.53:154,8,0	0/0:51,0:16:6.64:0,7,142	0/0:82,0:28:4.14:0,4,88	1/1:7,26:34:0.88:314,1,0	1/1:3,14:20:9.03:388,9,0	1/1:2,24:28:12.51:518,13,0	1/1:37,0:37:92.71:990,93,0	1/1:13,0:13:21.02:357,21,0	1/1:3,16:20:44.92:1174,45,0	0/1:2,16:22:11.07:249,0,11	1/1:1,21:24:21.07:902,21,0	1/1:2,16:19:24.08:1016,24,0	1/1:2,18:21:6.02:259,6,0	1/1:3,16:23:15.05:646,15,0	1/1:4,29:35:41.46:1611,41,0	1/1:2,20:23:12.04:517,12,0	1/1:7,21:33:12.04:456,12,0	1/1:23,1:24:34.35:911,34,0	1/1:6,20:27:14.73:439,15,0	1/1:8,24:38:2.38:19,2,0	1/1:1,24:26:8.97:387,9,0	1/1:3,21:26:2.75:129,3,0	1/1:10,16:29:8.53:387,9,0	1/1:4,18:23:12.04:517,12,0	1/1:3,20:25:56.91:1411,57,0	1/1:3,12:16:21.07:840,21,0	1/1:0,10:10:6.02:259,6,0
chr10	29784881	.	C	CTCTCTG	9397.29	PASS	AB=0.983;AC=44;AF=0.786;AN=56;BaseQRankSum=1.090;DP=761;FS=6.384;HRun=0;HaplotypeScore=155.9317;InbreedingCoeff=0.0503;MQ=55.42;MQ0=17;MQRankSum=-2.622;QD=14.85;ReadPosRankSum=8.623;VQSLOD=2.7593;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:38,0:37:29.32:91,29,0	1/1:10,0:10:8.51:142,9,0	0/0:47,0:15:10.85:0,11,156	0/0:81,0:25:4.88:0,5,167	0/1:32,1:33:20.44:251,0,20	1/1:20,0:20:12.04:325,12,0	1/1:27,0:27:11.77:325,12,0	0/1:37,0:37:24.67:473,0,25	1/1:10,3:13:20.85:322,21,0	1/1:20,0:20:32.14:659,32,0	0/1:21,0:21:16.40:153,0,16	0/1:25,0:25:18.83:542,0,19	1/1:20,0:20:7.11:623,7,0	1/1:20,0:20:6.02:163,6,0	1/1:22,0:22:14.70:406,15,0	1/1:35,0:34:40.46:1025,40,0	1/1:23,0:23:12.04:325,12,0	0/1:30,1:31:6.92:340,0,7	0/1:23,2:25:10.56:570,0,11	1/1:26,0:26:11.69:261,12,0	1/1:34,0:34:2.91:20,3,0	1/1:26,0:26:9.47:243,9,0	1/1:25,0:25:2.89:81,3,0	0/1:30,0:29:12.65:231,0,13	1/1:23,0:23:12.04:325,12,0	0/1:24,0:24:0.57:805,0,1	1/1:16,0:16:21.07:535,21,0	1/1:8,0:8:6.02:163,6,0
chr10	29784885	.	C	CTG	4142.75	PASS	AB=0.989;AC=35;AF=0.625;AN=56;BaseQRankSum=5.498;DP=715;FS=13.159;HRun=0;HaplotypeScore=145.9376;InbreedingCoeff=-0.2908;MQ=51.34;MQ0=14;MQRankSum=-4.519;QD=6.89;ReadPosRankSum=6.650;VQSLOD=2.0719;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,35:36:39.13:750,39,0	0/1:9,0:9:6.95:50,0,7	0/0:42,0:12:27.88:0,28,258	0/0:71,0:20:4.04:0,4,213	0/1:32,0:32:46.14:120,0,46	0/1:20,0:20:32.91:71,0,33	1/1:27,0:27:12.49:115,12,0	0/1:35,0:35:99:275,0,230	0/1:10,2:12:39.38:145,0,39	0/1:20,0:19:27.61:171,0,28	0/1:20,0:20:7.63:70,0,8	0/1:27,0:27:57.52:210,0,58	1/1:20,0:21:5.89:193,6,0	1/1:20,0:20:8.75:69,9,0	0/1:22,0:22:5.94:125,0,6	1/1:32,0:32:30.73:344,31,0	1/1:22,0:22:9.01:86,9,0	0/1:26,0:26:2.95:141,0,3	0/1:23,1:24:99:272,0,127	1/1:22,0:22:13.79:122,14,0	0/1:30,0:30:14.99:15,0,19	0/1:25,0:25:4.15:101,0,4	0/1:22,0:23:35.62:36,0,37	0/1:30,0:30:50.98:51,0,54	1/1:18,0:18:14.76:126,15,0	0/1:24,0:24:52.50:256,0,52	1/1:14,1:15:19.84:183,20,0	0/1:8,0:8:14.95:48,0,15
chr10	29785370	.	C	CTCTCTT	7714.79	PASS	AB=0.960;AC=40;AF=0.714;AN=56;BaseQRankSum=-6.820;DP=669;FS=30.675;HRun=0;HaplotypeScore=169.3948;InbreedingCoeff=0.1317;MQ=54.78;MQ0=6;MQRankSum=4.052;QD=12.82;ReadPosRankSum=7.311;VQSLOD=2.4182;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:25:35.80:0,36,331	1/1:13,0:13:9.15:190,9,0	0/0:15,0:7:11.13:0,11,72	0/0:25,0:11:22.82:0,23,206	0/1:29,0:29:16.18:385,0,16	1/1:36,0:35:33.20:470,33,0	1/1:21,0:21:23.45:357,23,0	1/1:39,0:37:16.56:411,17,0	0/1:22,0:22:10.85:11,0,99	0/1:28,0:25:33.93:383,0,34	1/1:20,0:19:15:345,15,0	1/1:13,0:13:27.43:240,27,0	1/1:22,0:19:6.57:311,7,0	1/1:19,0:18:27.25:308,27,0	1/1:29,0:29:53.57:463,54,0	0/1:21,0:21:9.81:307,0,10	0/1:9,17:28:57.82:58,0,61	0/1:19,0:19:2.22:339,0,2	1/1:20,0:20:33.33:308,33,0	1/1:35,0:35:7.60:436,8,0	0/1:19,0:18:43.60:214,0,44	0/1:19,0:18:5.11:305,0,5	0/1:17,0:16:16.59:176,0,17	1/1:25,0:23:9.93:308,10,0	1/1:25,0:25:30.67:263,31,0	1/1:34,0:33:12.21:541,12,0	1/1:34,0:32:37.16:435,37,0	0/1:15,0:14:16.41:151,0,16
chr10	29786714	.	AT	A	1971.35	PASS	AB=0.900;AC=14;AF=0.250;AN=56;BaseQRankSum=5.537;DP=277;FS=1.167;HRun=1;HaplotypeScore=34.4006;InbreedingCoeff=0.7307;MQ=74.45;MQ0=2;MQRankSum=-0.554;QD=19.52;ReadPosRankSum=1.607;VQSLOD=3.8298;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:30.03:0,30,366	0/0:3,0:3:9:0,9,98	0/0:17,0:7:4.18:0,4,56	0/1:22,2:11:4.10:4,0,79	0/0:8,0:8:20.86:0,21,236	0/0:14,0:14:31:0,31,488	0/0:1,0:1:3.01:0,3,39	0/0:31,0:31:90.17:0,90,1009	0/1:6,1:7:2.56:10,0,3	0/0:10,0:10:30.10:0,30,383	0/0:10,0:10:27.09:0,27,347	0/0:8,0:8:24.06:0,24,296	0/0:4,0:4:12.04:0,12,155	0/0:10,0:10:27.09:0,27,345	1/1:3,8:11:17.56:227,18,0	0/0:1,0:1:3.01:0,3,39	1/1:7,12:19:53.61:655,54,0	1/1:5,13:18:50.67:612,51,0	1/1:7,5:12:33.03:374,33,0	1/1:0,4:4:12:145,12,0	1/1:1,4:4:9.03:125,9,0	0/0:2,0:2:6.02:0,6,78	0/0:6,0:6:18.06:0,18,233	0/0:9,0:9:22.67:0,23,289	0/0:9,0:9:27.06:0,27,321	0/0:4,0:4:12.03:0,12,142	0/0:12,0:12:26.37:0,26,356	0/0:7,0:7:11.84:0,12,140
chr10	29787535	.	G	GA	10400.92	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-13.688;DP=619;FS=11.216;HRun=8;HaplotypeScore=57.4057;InbreedingCoeff=0.9769;MQ=69.83;MQ0=0;MQRankSum=-0.188;QD=28.19;ReadPosRankSum=-0.259;VQSLOD=4.5278;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,126,1153	1/1:1,4:5:9.03:104,9,0	0/0:18,0:10:17.64:0,18,156	0/0:25,0:22:7.46:0,7,286	1/1:1,11:13:36.11:414,36,0	1/1:1,17:18:42.12:485,42,0	1/1:2,31:33:84.25:969,84,0	1/1:6,28:34:84.22:953,84,0	0/0:16,0:16:45.02:0,45,411	1/1:6,23:29:66.20:762,66,0	1/1:1,9:10:27.04:297,27,0	1/1:2,17:19:48.14:554,48,0	1/1:1,19:20:42.12:484,42,0	1/1:4,18:22:51.15:588,51,0	0/0:30,0:30:72.03:0,72,659	1/1:2,17:19:48.14:554,48,0	0/0:36,0:36:99:0,102,919	0/0:25,0:25:62.99:0,63,569	0/0:18,0:18:54.03:0,54,494	0/0:12,0:12:33.02:0,33,302	0/0:21,0:21:51:0,51,462	1/1:2,12:14:30.09:346,30,0	1/1:1,13:14:36.11:415,36,0	1/1:8,33:41:99:1211,105,0	1/1:2,8:10:24.07:277,24,0	1/1:6,24:31:75.06:845,75,0	1/1:1,29:30:78.23:900,78,0	1/1:0,7:7:21.06:243,21,0
chr10	29787707	.	G	GA	147.74	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.681;DP=300;FS=2.072;HRun=0;HaplotypeScore=32.8101;InbreedingCoeff=0.7453;MQ=103.12;MQ0=0;MQRankSum=-1.620;QD=24.62;ReadPosRankSum=0.310;VQSLOD=4.3642;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:81.27:0,81,1133	0/0:1,0:1:3.01:0,3,42	0/0:18,0:18:51.17:0,51,711	0/0:23,0:23:58.83:0,59,644	0/0:11,0:11:33.11:0,33,461	0/0:12,0:12:30.08:0,30,386	0/0:15,0:15:42.14:0,42,585	0/0:16,0:16:45.13:0,45,582	1/1:2,4:6:18.06:238,18,0	0/0:10,0:10:30.10:0,30,418	0/0:3,0:3:9.03:0,9,126	0/0:12,0:12:36.12:0,36,504	0/0:4,0:4:12.04:0,12,166	0/0:10,0:10:30.09:0,30,403	0/0:9,0:9:27.09:0,27,375	0/0:5,0:5:15.05:0,15,210	0/0:9,0:9:27.09:0,27,378	0/0:16,0:16:48.08:0,48,620	0/0:5,0:5:15.04:0,15,194	0/0:8,0:8:24.07:0,24,319	0/0:27,0:27:81.26:0,81,1116	0/0:9,0:9:27.09:0,27,376	0/0:7,0:7:21.07:0,21,294	0/0:8,0:8:24.08:0,24,335	0/0:7,0:7:21.07:0,21,293	0/0:8,0:8:24.07:0,24,321	0/0:7,0:7:21.07:0,21,289	0/0:7,0:7:21.07:0,21,293
chr10	29787708	.	G	GA	42.69	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.065;DP=294;FS=0.000;HRun=2;HaplotypeScore=33.3737;InbreedingCoeff=0.6885;MQ=103.82;MQ0=0;MQRankSum=-1.537;QD=7.12;ReadPosRankSum=1.609;VQSLOD=0.7737;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:81.25:0,81,1003	0/0:1,0:1:3.01:0,3,37	0/0:19,0:19:48.14:0,48,586	0/0:21,0:22:49.86:0,50,555	0/0:11,0:11:30.09:0,30,372	0/0:12,0:12:26.70:0,27,321	0/0:15,0:15:39.10:0,39,458	0/0:14,0:14:36.09:0,36,424	1/1:2,4:6:12.03:128,12,0	0/0:10,0:10:27.08:0,27,335	0/0:3,0:3:9.03:0,9,112	0/0:12,0:12:36.10:0,36,434	0/0:4,0:4:9.03:0,9,112	0/0:10,0:10:30.08:0,30,359	0/0:9,0:9:24.04:0,24,281	0/0:5,0:5:15.05:0,15,186	0/0:9,0:9:27.06:0,27,319	0/0:15,0:15:39.02:0,39,433	0/0:4,0:4:12.04:0,12,148	0/0:7,0:7:21.07:0,21,260	0/0:26,0:26:78.25:0,78,967	0/0:9,0:9:24.08:0,24,297	0/0:7,0:7:21.07:0,21,260	0/0:8,0:8:21.07:0,21,260	0/0:7,0:7:21.07:0,21,260	0/0:8,0:8:24.07:0,24,288	0/0:7,0:7:15.05:0,15,186	0/0:7,0:7:21.07:0,21,260
chr10	29787843	.	TTA	T	95.54	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.693;DP=256;FS=2.150;HRun=0;HaplotypeScore=32.5283;InbreedingCoeff=0.6993;MQ=77.75;MQ0=0;MQRankSum=-1.460;QD=15.92;ReadPosRankSum=-1.534;VQSLOD=2.5836;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:48.13:0,48,766	0/0:4,0:4:12.04:0,12,187	0/0:12,0:12:23.84:0,24,465	0/0:11,0:12:33.06:0,33,483	0/0:7,0:7:21.07:0,21,362	0/0:11,0:11:33.11:0,33,551	0/0:19,0:19:57.18:0,57,935	0/0:23,0:23:65.97:0,66,984	1/1:1,5:6:14.54:183,15,0	0/0:10,0:10:30.10:0,30,500	0/0:8,0:8:24.08:0,24,415	0/0:15,0:15:45.14:0,45,730	0/0:8,0:8:24.08:0,24,413	0/0:8,0:8:24.05:0,24,360	0/0:4,0:4:12.04:0,12,205	0/0:8,0:8:24.07:0,24,370	0/0:15,0:15:45.12:0,45,717	0/0:6,0:6:15.05:0,15,259	0/0:6,0:6:18.04:0,18,245	0/0:1,0:1:3.01:0,3,52	0/0:12,0:12:35.95:0,36,573	0/0:5,0:5:15.05:0,15,259	0/0:4,0:4:12.04:0,12,206	0/0:4,0:4:12.04:0,12,207	0/0:9,0:9:27.08:0,27,438	0/0:10,0:10:29.30:0,29,448	0/0:4,0:4:12.04:0,12,208	0/0:9,0:9:24.08:0,24,415
chr10	29788152	.	CCAGAGGCAACCTCCTAAGGAAGCTTCTTGCT	C	164.54	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.407;DP=525;FS=2.921;HRun=0;HaplotypeScore=385.1612;InbreedingCoeff=0.7544;MQ=91.68;MQ0=1;MQRankSum=-0.035;QD=18.28;ReadPosRankSum=0.311;VQSLOD=1.2654;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,132,13502	0/0:7,0:7:18.06:0,18,1851	0/0:31,0:31:62.20:0,62,2339	0/0:22,0:22:53.07:0,53,1348	0/0:12,0:12:33.11:0,33,4419	0/0:18,0:18:54.19:0,54,6140	0/0:26,0:26:69.17:0,69,5078	0/0:21,0:21:54.07:0,54,1533	1/1:2,7:9:3.01:242,3,0	0/0:13,0:13:36.12:0,36,4214	0/0:5,0:5:15.01:0,15,1268	0/0:32,0:32:84.19:0,84,8006	0/0:24,0:24:66.20:0,66,6946	0/0:22,0:22:62.58:0,63,7494	0/0:16,0:16:45.10:0,45,3742	0/0:23,0:23:60.21:0,60,6476	0/0:21,0:21:60.19:0,60,6102	0/0:18,0:18:51.17:0,51,4919	0/0:14,0:14:36.11:0,36,2429	0/0:12,0:12:33.10:0,33,2339	0/0:38,0:38:90.58:0,91,7107	0/0:6,0:6:15:0,15,1132	0/0:8,0:8:24.07:0,24,2347	0/0:23,0:23:63.08:0,63,5020	0/0:12,0:12:33.10:0,33,3341	0/0:18,0:17:45.10:0,45,4379	0/0:12,0:12:36.12:0,36,4080	0/0:16,0:16:45.15:0,45,5923
chr10	29789844	.	CAG	C	1344.93	PASS	AB=0.829;AC=10;AF=0.185;AN=54;BaseQRankSum=6.482;DP=503;FS=16.681;HRun=0;HaplotypeScore=53.4301;InbreedingCoeff=0.3458;MQ=39.91;MQ0=127;MQRankSum=-1.305;QD=8.20;ReadPosRankSum=-1.694;VQSLOD=1.2697;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:11,4:8:38.16:114,0,38	0/0:3,0:3:6.02:0,6,105	0/0:8,0:5:5.20:0,5,104	0/0:11,0:9:14.77:0,15,303	0/0:10,0:7:9.03:0,9,158	0/0:13,0:11:21.07:0,21,368	0/0:52,0:26:22.48:0,22,371	0/0:15,0:10:15.05:0,15,260	1/1:4,7:8:21.07:294,21,0	0/0:14,0:7:18.06:0,18,313	0/0:3,0:3:9.03:0,9,158	0/0:25,0:22:25.84:0,26,566	0/0:25,0:22:47.45:0,47,832	0/0:29,0:23:33.10:0,33,549	0/1:9,5:12:43.90:158,0,44	0/0:15,0:12:24.07:0,24,373	0/1:32,6:23:99:259,0,156	0/1:35,3:22:51.99:420,0,52	1/1:9,0:3:3:25,3,0	./.	1/1:36,3:14:20.97:226,21,0	0/0:4,0:3:3.01:0,3,53	0/0:5,0:2:6.02:0,6,105	0/0:58,1:35:44.83:0,45,792	0/0:8,0:4:12.04:0,12,210	0/0:11,0:8:14.35:0,14,263	0/0:13,0:11:24.05:0,24,368	0/0:16,0:12:18.06:0,18,304
chr10	29789854	.	GAGGC	G	681.76	PASS	AB=0.952;AC=8;AF=0.160;AN=50;BaseQRankSum=7.009;DP=428;FS=0.000;HRun=0;HaplotypeScore=50.9999;InbreedingCoeff=-0.0523;MQ=34.30;MQ0=127;MQRankSum=-0.845;QD=3.39;ReadPosRankSum=2.935;VQSLOD=0.8049;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:5:14.91:0,15,174	0/0:3,0:2:6.02:0,6,84	./.	./.	0/0:7,0:4:9.02:0,9,165	0/0:7,0:5:12.04:0,12,168	0/0:43,0:19:23.53:0,24,375	0/0:12,0:7:9.02:0,9,110	0/0:12,0:7:18.02:0,18,229	0/0:17,0:9:19.74:0,20,229	0/0:6,0:6:6.02:0,6,84	0/1:16,0:14:33.59:34,0,320	0/0:20,0:18:45.14:0,45,802	0/1:21,0:14:22.32:22,0,387	0/1:10,2:9:62.87:63,0,77	0/0:14,0:10:17.75:0,18,320	0/1:26,4:17:99:197,0,131	0/1:34,1:19:44.73:433,0,45	0/0:6,0:2:5.75:0,6,30	./.	1/1:34,0:6:3.01:50,3,0	0/0:4,0:3:3:0,3,42	0/0:4,0:2:3.01:0,3,42	0/1:53,0:28:7.46:7,0,701	0/0:9,0:5:12.04:0,12,168	0/0:15,0:12:27.44:0,27,278	0/0:14,0:11:26.96:0,27,425	0/0:10,0:6:9.90:0,10,111
chr10	29790017	.	AGAG	A	914.79	PASS	AB=0.657;AC=13;AF=0.241;AN=54;BaseQRankSum=4.147;DP=346;FS=44.966;HRun=0;HaplotypeScore=42.0349;InbreedingCoeff=0.7337;MQ=61.48;MQ0=79;MQRankSum=-3.103;QD=12.04;ReadPosRankSum=2.067;VQSLOD=1.5023;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,6:5:5.70:88,6,0	0/0:6,0:6:15.05:0,15,248	0/0:26,0:18:54.05:0,54,841	0/0:26,0:14:41.45:0,41,581	0/0:5,0:4:9.03:0,9,147	0/0:14,0:11:27.04:0,27,441	0/0:18,0:18:42.51:0,43,654	0/0:11,0:10:23.97:0,24,359	1/1:1,2:1:3.01:53,3,0	0/0:12,0:8:24.08:0,24,389	0/0:4,0:4:12.04:0,12,196	0/0:21,0:18:39.59:0,40,637	0/0:18,0:17:48.64:0,49,783	0/0:19,0:15:39.56:0,40,607	1/1:3,7:6:12.04:209,12,0	0/0:8,0:8:21.07:0,21,343	1/1:12,11:10:24.08:422,24,0	0/1:11,12:9:0.10:196,0,0	1/1:2,1:2:2.03:51,2,0	1/1:2,3:2:3.01:53,3,0	./.	0/0:4,0:2:6.02:0,6,98	0/0:3,0:1:3.01:0,3,49	0/0:20,0:15:25.65:0,26,455	0/0:9,0:6:18.06:0,18,293	0/0:8,0:6:18.06:0,18,293	0/0:9,0:9:24.55:0,25,393	0/0:13,0:11:28.91:0,29,438
chr10	29790020	.	G	GGCA	950.71	PASS	AB=0.833;AC=13;AF=0.241;AN=54;BaseQRankSum=4.369;DP=338;FS=52.955;HRun=0;HaplotypeScore=46.8174;InbreedingCoeff=0.7243;MQ=67.18;MQ0=59;MQRankSum=-3.461;QD=13.58;ReadPosRankSum=0.966;VQSLOD=1.2920;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,1:5:6.02:89,6,0	0/0:7,0:7:18.04:0,18,287	0/0:27,0:19:54.01:0,54,894	0/0:28,0:16:44.47:0,44,657	0/0:5,0:4:9.03:0,9,158	0/0:14,0:11:26.85:0,27,475	0/0:18,0:18:41.31:0,41,699	0/0:13,0:12:26.96:0,27,427	1/1:3,0:1:3.01:53,3,0	0/0:10,0:8:24.08:0,24,417	0/0:4,0:4:12.04:0,12,211	0/0:21,0:19:38.92:0,39,685	0/0:19,0:18:51.13:0,51,863	0/0:15,0:15:39.09:0,39,652	1/1:7,3:6:12.04:209,12,0	0/0:9,0:9:24.04:0,24,389	1/1:15,6:12:27.09:457,27,0	0/1:16,4:8:2.96:196,0,3	1/1:3,0:2:3.01:53,3,0	1/1:4,1:2:3.01:53,3,0	./.	0/0:3,0:2:6.02:0,6,106	0/0:2,0:1:3.01:0,3,53	0/0:20,0:16:21.19:0,21,481	0/0:9,0:6:18.06:0,18,316	0/0:7,0:6:18.06:0,18,316	0/0:9,0:9:24.08:0,24,422	0/0:13,0:11:26.79:0,27,462
chr10	29790114	.	T	TA	664.37	PASS	AB=0.833;AC=18;AF=0.321;AN=56;BaseQRankSum=5.581;DP=257;FS=10.214;HRun=0;HaplotypeScore=50.7908;InbreedingCoeff=-0.3852;MQ=52.46;MQ0=4;MQRankSum=1.418;QD=4.92;ReadPosRankSum=-1.028;VQSLOD=1.3634;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:10,1:11:3.81:0,4,85	0/0:1,0:1:2.74:0,3,12	0/0:5,0:3:8.98:0,9,103	0/0:10,0:5:15.02:0,15,189	0/0:10,0:10:2.53:0,3,80	0/1:7,3:10:40.36:55,0,40	0/1:6,1:7:19.14:22,0,19	0/0:27,0:25:30.26:0,30,222	0/0:7,0:7:19.94:0,20,106	0/1:7,2:9:36.64:37,0,45	0/1:4,2:6:22.60:37,0,23	0/1:5,0:5:22.50:24,0,22	0/0:7,0:7:2.08:0,2,72	0/1:2,1:3:10.34:19,0,10	0/0:6,1:7:1.14:0,1,64	0/1:6,1:7:31.36:31,0,42	0/0:21,0:20:46.27:0,46,257	0/0:15,1:16:30.90:0,31,161	0/1:11,0:10:34.55:62,0,35	0/1:5,2:7:32.41:32,0,42	0/1:7,0:6:12.70:13,0,18	0/1:2,1:3:10.11:33,0,10	0/1:7,2:9:10.67:83,0,11	1/1:2,1:3:5.12:30,5,0	0/1:8,7:15:34.70:120,0,35	0/1:7,0:7:26.48:48,0,26	0/1:4,2:6:18.63:19,0,47	0/1:12,8:20:82.67:152,0,83
chr10	29790115	.	T	TTTA	1992.72	PASS	AB=0.839;AC=21;AF=0.375;AN=56;BaseQRankSum=6.871;DP=253;FS=31.429;HRun=0;HaplotypeScore=56.6400;InbreedingCoeff=-0.6297;MQ=52.59;MQ0=4;MQRankSum=-1.304;QD=10.66;ReadPosRankSum=1.750;VQSLOD=1.3118;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:10,0:11:17.97:18,0,133	0/0:1,0:1:2.94:0,3,18	0/0:5,0:3:9.01:0,9,95	0/0:10,0:5:12.51:0,13,144	0/0:9,0:9:26.61:0,27,177	0/1:7,3:10:48.13:197,0,48	0/1:7,1:8:26.87:27,0,55	0/0:27,0:25:5.81:0,6,256	0/0:7,0:7:20.91:0,21,160	0/1:7,2:9:81.57:107,0,82	0/1:4,2:6:36.61:86,0,37	0/1:4,0:5:33.46:33,0,39	0/0:7,0:7:17.80:0,18,127	0/1:2,1:3:17.95:43,0,18	0/1:6,0:7:48.87:143,0,49	0/1:6,1:7:68.90:83,0,69	0/1:21,0:20:99:132,0,272	0/1:14,0:15:99:112,0,148	0/1:9,0:8:44.07:44,0,68	0/1:5,0:7:55.34:72,0,55	0/1:8,0:7:30.71:43,0,31	0/1:2,1:3:19.36:43,0,19	0/1:5,2:7:48.85:114,0,49	0/1:2,1:3:28.76:40,0,29	0/1:8,7:15:69.38:341,0,69	0/1:7,0:7:34.25:34,0,57	0/1:4,2:6:67.09:67,0,71	0/1:12,8:20:99:368,0,150
chr10	29790542	.	T	TG	12627.70	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-13.439;DP=719;FS=3.844;HRun=6;HaplotypeScore=73.3915;InbreedingCoeff=0.9975;MQ=74.59;MQ0=0;MQRankSum=0.148;QD=30.43;ReadPosRankSum=-1.730;VQSLOD=4.8794;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:59,0:59:99:0,165,1678	1/1:2,14:16:42.13:528,42,0	0/0:14,0:12:35.64:0,36,324	0/0:17,0:17:16.94:0,17,139	1/1:2,15:17:45.12:548,45,0	1/1:2,17:19:45.14:566,45,0	1/1:5,40:45:99:1396,111,0	1/1:5,14:19:33.06:374,33,0	0/0:28,0:28:75.17:0,75,765	1/1:4,17:21:48.14:590,48,0	1/1:1,10:11:21.07:262,21,0	1/1:2,32:34:96.31:1205,96,0	1/1:1,24:25:66.21:830,66,0	1/1:5,27:32:78.25:979,78,0	0/0:28,0:28:78.18:0,78,795	1/1:1,18:19:51.16:642,51,0	0/0:36,0:36:87.19:0,87,887	0/0:35,0:35:99:0,99,999	0/0:18,0:18:51.11:0,51,520	0/0:9,0:9:27.06:0,27,275	0/0:60,0:60:99:0,171,1731	1/1:2,26:28:63.20:793,63,0	1/1:4,12:17:33.10:409,33,0	1/1:3,29:32:78.25:981,78,0	1/1:3,15:18:48.15:597,48,0	1/1:6,30:36:90.23:1098,90,0	1/1:2,12:14:36.12:452,36,0	1/1:0,12:12:30.10:377,30,0
chr10	29790822	.	T	TTG	2832.80	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-2.259;DP=647;FS=4.134;HRun=0;HaplotypeScore=77.1206;InbreedingCoeff=0.9358;MQ=84.60;MQ0=0;MQRankSum=-4.313;QD=48.84;ReadPosRankSum=-0.242;VQSLOD=4.3945;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,30:32:81.28:1563,81,0	0/0:6,0:6:18.06:0,18,276	0/0:22,0:22:66.22:0,66,975	0/0:19,0:19:51.17:0,51,763	0/0:9,0:9:27.08:0,27,393	0/0:14,0:14:42.13:0,42,622	0/0:19,0:19:57.16:0,57,825	0/0:26,0:26:66.22:0,66,1011	1/1:1,25:26:72.25:1391,72,0	0/0:29,0:29:87.25:0,87,1272	0/0:8,0:8:24.08:0,24,367	0/0:34,0:34:96.31:0,96,1449	0/0:36,0:36:99:0,105,1558	0/0:37,0:37:99:0,105,1580	0/0:30,0:30:87.28:0,87,1311	0/0:34,0:34:96.31:0,96,1444	0/0:25,0:25:72.24:0,72,1103	0/0:23,0:23:63.21:0,63,957	0/0:23,0:23:63.20:0,63,945	0/0:15,0:15:42.14:0,42,636	0/0:43,0:43:99:0,129,1962	0/0:12,0:12:33.08:0,33,463	0/0:13,0:13:36.12:0,36,551	0/0:27,0:27:81.26:0,81,1210	0/0:14,0:14:42.14:0,42,643	0/0:20,1:21:5.24:0,5,860	0/0:22,0:22:66.21:0,66,988	0/0:28,0:28:78.26:0,78,1192
chr10	29791078	.	AGTCACT	A	20046.30	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=15.638;DP=530;FS=5.837;HRun=0;HaplotypeScore=126.7546;InbreedingCoeff=0.9937;MQ=65.44;MQ0=0;MQRankSum=-16.664;QD=60.93;ReadPosRankSum=1.808;VQSLOD=4.6836;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:78.27:0,78,2800	1/1:0,7:7:18.06:432,18,0	0/0:19,0:19:50.20:0,50,1674	0/0:12,0:12:33.11:0,33,1012	1/1:0,19:19:48.16:1137,48,0	1/1:1,25:25:63.22:1513,63,0	1/1:0,10:10:24.08:576,24,0	1/1:5,26:31:78.23:1657,78,0	0/0:23,0:23:66.21:0,66,2101	1/1:2,21:23:63.19:1375,63,0	1/1:0,14:14:42.06:900,42,0	1/1:0,25:25:69.24:1657,69,0	1/1:2,10:12:30.10:721,30,0	1/1:2,14:16:39.13:937,39,0	0/0:14,0:14:39.12:0,39,1322	1/1:1,11:12:30.10:720,30,0	0/0:19,0:19:54.19:0,54,1842	0/0:27,0:27:75.26:0,75,2649	0/0:23,0:23:69.24:0,69,2325	0/0:24,0:24:69.24:0,69,2484	0/0:14,0:14:39.12:0,39,1308	1/1:1,17:18:48.16:1153,48,0	1/1:3,16:19:45.15:1079,45,0	1/1:1,7:8:12.04:285,12,0	1/1:2,19:21:60.21:1439,60,0	1/1:0,27:26:75.24:1726,75,0	1/1:1,23:24:66.23:1586,66,0	1/1:0,17:17:48.16:1152,48,0
chr10	29793818	.	GCCCC	G	943.19	PASS	AC=2;AF=0.037;AN=54;BaseQRankSum=-7.165;DP=485;FS=3.878;HRun=13;HaplotypeScore=172.1561;InbreedingCoeff=0.6055;MQ=69.76;MQ0=0;MQRankSum=2.819;QD=28.58;ReadPosRankSum=3.637;VQSLOD=0.8329;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,25:33:75.16:1037,75,0	0/0:11,0:11:27.09:0,27,398	0/0:14,0:13:14.36:0,14,261	0/0:18,0:17:37.80:0,38,645	0/0:22,0:22:48.16:0,48,672	0/0:23,0:23:54.18:0,54,731	0/0:24,0:24:51.17:0,51,748	0/0:18,0:18:36.11:0,36,512	0/0:4,0:8:12.04:0,12,224	0/0:24,0:24:63.20:0,63,889	0/0:20,0:20:36.11:0,36,481	0/0:22,0:22:60.19:0,60,815	0/0:25,0:25:60.19:0,60,845	0/0:25,0:25:60.18:0,60,808	0/0:5,0:5:3.01:0,3,62	0/0:22,0:22:51.14:0,51,668	0/0:16,0:16:20.99:0,21,384	0/0:4,0:4:3.01:0,3,56	0/0:8,0:8:6.02:0,6,130	./.	0/0:10,0:10:5.98:0,6,83	0/0:12,0:12:27.09:0,27,370	0/0:12,0:12:24.01:0,24,321	0/0:31,0:31:70.01:0,70,850	0/0:23,0:23:57.18:0,57,758	0/0:29,0:29:78.26:0,78,1103	0/0:11,0:11:27.09:0,27,389	0/0:13,0:13:35.95:0,36,483
chr10	29793821	.	C	CG	7410.59	PASS	AB=0.812;AC=42;AF=0.778;AN=54;BaseQRankSum=1.989;DP=488;FS=16.689;HRun=0;HaplotypeScore=135.9524;InbreedingCoeff=0.3480;MQ=77.80;MQ0=0;MQRankSum=-6.556;QD=17.86;ReadPosRankSum=6.469;VQSLOD=5.6719;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:83.13:0,83,573	1/1:3,8:11:32.72:242,33,0	0/0:19,0:19:13.22:0,13,307	0/0:21,0:20:45.82:0,46,412	0/1:7,15:22:1.27:345,0,1	1/1:6,17:23:65.71:577,66,0	1/1:11,15:26:43.13:434,43,0	0/1:12,10:22:6.33:322,0,6	0/1:10,0:10:8.19:61,0,8	1/1:4,21:25:64.47:531,64,0	1/1:7,10:18:40.67:328,41,0	1/1:6,17:23:29.09:443,29,0	1/1:7,19:26:67.51:559,68,0	1/1:5,19:24:56.25:531,56,0	1/1:5,0:5:2.83:14,3,0	1/1:10,14:24:14.38:370,14,0	0/1:11,0:11:54.99:69,0,55	1/1:1,3:4:2.88:15,3,0	0/1:5,0:5:11.19:13,0,11	./.	1/1:4,0:4:4.80:47,5,0	1/1:4,8:12:14.84:218,15,0	1/1:7,6:13:10.49:144,10,0	1/1:12,19:31:56.32:524,56,0	1/1:4,17:21:34.48:506,34,0	1/1:6,25:31:44.11:664,44,0	1/1:2,9:11:29.88:243,30,0	0/1:4,9:13:11.95:213,0,12
chr10	29793825	.	C	CCTT	14814.57	PASS	AB=1.000;AC=37;AF=0.685;AN=54;BaseQRankSum=-0.944;DP=503;FS=1.477;HRun=0;HaplotypeScore=138.4880;InbreedingCoeff=0.8774;MQ=76.87;MQ0=0;MQRankSum=-6.758;QD=37.41;ReadPosRankSum=3.792;VQSLOD=5.4820;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:78.11:0,78,739	1/1:4,8:12:32.72:445,33,0	0/0:19,0:17:31.02:0,31,403	0/0:22,0:21:46.69:0,47,574	1/1:11,14:25:48.21:740,48,0	1/1:4,17:21:56.68:890,57,0	1/1:11,15:26:38.33:882,38,0	1/1:4,10:20:59.99:740,60,0	0/1:10,0:10:4.20:4,0,118	1/1:6,21:27:78.26:1181,78,0	1/1:7,11:18:45.82:633,46,0	1/1:5,17:23:44.92:945,45,0	1/1:7,19:26:74.42:1075,74,0	1/1:4,19:23:66.19:1030,66,0	0/0:5,0:5:2.96:0,3,45	1/1:8,14:22:60.20:912,60,0	0/0:15,0:15:29.23:0,29,329	0/0:5,0:5:8.67:0,9,76	0/0:5,0:5:9.03:0,9,122	./.	0/0:5,0:5:8.93:0,9,78	1/1:6,8:14:35.63:466,36,0	1/1:6,6:12:31.20:390,31,0	1/1:18,18:36:85.69:1212,86,0	1/1:5,17:22:45.52:878,46,0	1/1:4,25:35:98.37:1448,98,0	1/1:2,8:11:31.33:442,31,0	1/1:4,9:13:36.22:501,36,0
chr10	29793827	.	C	CTT	4232.11	PASS	AB=0.983;AC=23;AF=0.426;AN=54;BaseQRankSum=11.146;DP=485;FS=0.363;HRun=0;HaplotypeScore=149.2235;InbreedingCoeff=-0.0600;MQ=77.58;MQ0=0;MQRankSum=-7.275;QD=11.53;ReadPosRankSum=10.774;VQSLOD=3.3550;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:83.56:0,84,650	1/1:10,0:10:23.58:184,24,0	0/0:18,0:16:40.17:0,40,452	0/0:22,0:21:46.27:0,46,559	0/1:20,2:22:86.69:230,0,87	1/1:19,1:20:30.80:282,31,0	0/1:23,1:25:40.72:275,0,41	0/1:17,0:17:99:149,0,103	0/0:10,0:10:18.01:0,18,211	0/1:26,0:26:8.87:292,0,9	1/1:15,0:15:4.85:202,5,0	1/1:22,0:22:23.10:275,23,0	0/1:26,0:26:21.61:336,0,22	0/1:23,0:23:30.51:251,0,31	0/0:7,0:7:5.96:0,6,72	0/1:21,0:21:21.82:173,0,22	0/0:15,0:15:29.79:0,30,332	0/0:6,0:6:8.01:0,8,111	0/0:4,0:4:9.03:0,9,121	./.	0/0:4,0:4:9.02:0,9,108	0/1:13,1:14:47.05:144,0,47	0/1:12,0:12:28.88:129,0,29	0/1:35,0:35:86.76:360,0,87	0/1:21,0:21:27.53:281,0,28	0/1:35,0:35:68.47:371,0,68	1/1:11,0:11:3.35:150,3,0	0/1:12,0:12:29.28:150,0,29
chr10	29794053	.	TTCTCTCTC	T	1391.04	PASS	AB=0.960;AC=30;AF=0.652;AN=46;BaseQRankSum=2.670;DP=617;FS=14.319;HRun=0;HaplotypeScore=153.1418;InbreedingCoeff=0.3321;MQ=70.95;MQ0=9;MQRankSum=-0.945;QD=3.96;ReadPosRankSum=2.321;VQSLOD=2.1620;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:12:0,12,434	1/1:12,0:12:2.99:25,3,0	./.	0/0:65,0:41:2.69:0,3,8	./.	0/0:16,0:16:0:0,0,0	1/1:31,0:31:2.54:73,3,0	0/0:37,0:36:2.69:0,3,8	1/1:10,2:14:11.82:179,12,0	0/1:20,0:20:1.87:19,0,2	./.	1/1:15,1:18:6.02:130,6,0	1/1:14,11:25:13.54:317,14,0	0/0:18,0:19:12.01:0,12,184	1/1:16,0:17:4.97:62,5,0	0/1:17,4:20:10.68:139,0,11	1/1:20,0:21:3.01:56,3,0	1/1:9,0:11:6.02:112,6,0	1/1:23,0:24:1.31:53,1,0	./.	0/1:28,0:28:0:0,0,0	0/0:18,0:17:9.03:0,9,188	0/1:19,0:19:16.88:17,0,36	1/1:24,1:32:6.38:87,6,0	./.	1/1:24,0:23:5.74:62,6,0	1/1:18,1:19:11.93:140,12,0	1/1:13,0:12:3.01:56,3,0
chr10	29794371	.	T	TTGTG	9752.11	PASS	AB=0.683;AC=45;AF=0.833;AN=54;BaseQRankSum=-4.918;DP=697;FS=3.477;HRun=0;HaplotypeScore=130.9301;InbreedingCoeff=0.1605;MQ=66.73;MQ0=13;MQRankSum=2.351;QD=15.65;ReadPosRankSum=-1.556;VQSLOD=4.3292;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:34,0:33:8.90:131,9,0	1/1:10,1:13:8.74:253,9,0	./.	0/0:23,0:13:0:0,0,0	1/1:12,4:18:20.52:333,21,0	0/1:14,7:22:35.25:143,0,35	1/1:11,20:36:36.12:850,36,0	1/1:32,0:27:5.91:134,6,0	0/0:11,0:24:15.99:0,16,288	0/1:17,10:29:8.30:552,0,8	1/1:8,4:13:6.02:142,6,0	1/1:14,15:36:45.64:824,46,0	1/1:12,12:26:26.83:581,27,0	1/1:11,9:24:18:411,18,0	1/1:11,11:24:23.23:556,23,0	0/1:11,3:27:29.96:280,0,30	1/1:19,14:34:41.61:840,42,0	0/1:7,4:13:69.79:208,0,70	1/1:12,0:11:9.03:166,9,0	0/1:12,8:25:1.51:368,0,2	1/1:21,15:42:13.64:231,14,0	1/1:5,8:15:5.38:24,5,0	1/1:10,7:20:5.95:142,6,0	1/1:17,18:39:42.14:993,42,0	1/1:16,11:28:15.05:351,15,0	1/1:15,11:30:44.81:743,45,0	1/1:12,7:19:12.04:263,12,0	1/1:2,4:7:12.01:235,12,0
chr10	29795512	.	A	AC	1029.04	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-5.175;DP=678;FS=4.874;HRun=1;HaplotypeScore=92.1748;InbreedingCoeff=0.9992;MQ=82.39;MQ0=0;MQRankSum=-3.959;QD=36.75;ReadPosRankSum=-0.236;VQSLOD=3.5798;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,27:28:75.25:1124,75,0	0/0:11,0:11:33.11:0,33,428	0/0:20,0:20:45.20:0,45,602	0/0:19,0:18:41.83:0,42,499	0/0:31,0:31:90.21:0,90,1117	0/0:22,0:22:63.20:0,63,816	0/0:19,0:19:48.16:0,48,621	0/0:23,0:23:69.21:0,69,874	0/0:30,0:30:88.76:0,89,1097	0/0:32,0:32:93.30:0,93,1201	0/0:28,0:28:81.26:0,81,1051	0/0:22,0:22:63.20:0,63,817	0/0:39,0:39:99:0,114,1421	0/0:30,0:30:78.22:0,78,983	0/0:36,0:35:99:0,99,1285	0/0:26,0:26:75.23:0,75,958	0/0:32,0:32:96.31:0,96,1246	0/0:12,0:12:36.12:0,36,467	0/0:27,0:27:78.24:0,78,984	0/0:25,0:25:75.23:0,75,959	0/0:16,0:16:48.16:0,48,623	0/0:29,0:29:87.28:0,87,1128	0/0:16,0:16:39.13:0,39,504	0/0:12,0:12:33.09:0,33,413	0/0:25,0:25:75.22:0,75,957	0/0:28,0:28:81.25:0,81,1033	0/0:25,0:25:72.22:0,72,917	0/0:15,0:15:45.15:0,45,584
chr10	29795564	.	TA	T	16280.77	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=11.017;DP=697;FS=0.581;HRun=1;HaplotypeScore=71.3155;InbreedingCoeff=0.9992;MQ=91.88;MQ0=0;MQRankSum=-4.143;QD=39.04;ReadPosRankSum=3.320;VQSLOD=5.5267;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:99:0,99,1578	1/1:0,7:7:21.07:294,21,0	0/0:30,0:30:87.30:0,87,1388	0/0:27,0:27:75.21:0,75,1149	1/1:0,35:35:99:1341,99,0	1/1:0,15:15:45.15:629,45,0	1/1:0,23:23:60.20:839,60,0	1/1:0,31:31:93.28:1267,93,0	0/0:28,0:28:84.27:0,84,1320	1/1:0,29:29:87.29:1217,87,0	1/1:0,25:25:69.14:921,69,0	1/1:0,18:18:51.17:713,51,0	1/1:0,36:36:99:1427,102,0	1/1:0,22:22:57.19:797,57,0	0/0:36,0:35:99:0,108,1687	1/1:0,28:28:75.25:1044,75,0	0/0:41,0:41:99:0,123,1916	0/0:11,0:11:30.10:0,30,479	0/0:22,0:22:63.20:0,63,985	0/0:34,0:34:99:0,102,1631	0/0:18,0:18:51.16:0,51,791	1/1:0,33:33:96.32:1343,96,0	1/1:0,15:15:39.13:546,39,0	1/1:0,11:11:27.09:378,27,0	1/1:0,27:27:78.26:1091,78,0	1/1:0,23:23:63.21:881,63,0	1/1:0,25:25:69.11:965,69,0	1/1:0,14:14:42.14:587,42,0
chr10	29798147	.	TC	T	1275.07	PASS	AB=0.939;AC=36;AF=0.643;AN=56;BaseQRankSum=-0.822;DP=362;FS=39.535;HRun=12;HaplotypeScore=49.3642;InbreedingCoeff=0.4668;MQ=84.75;MQ0=1;MQRankSum=0.898;QD=4.67;ReadPosRankSum=2.337;VQSLOD=-0.5305;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:14:6.70:0,7,32	1/1:3,2:5:5.95:47,6,0	0/0:26,0:19:12.90:0,13,114	0/1:15,0:13:3.19:3,0,23	1/1:6,2:9:2.32:7,2,0	1/1:11,2:15:6.97:35,7,0	1/1:17,5:28:33.30:197,33,0	1/1:11,3:14:8.90:69,9,0	0/0:4,0:4:2.97:0,3,20	1/1:4,6:11:17.84:132,18,0	1/1:6,4:13:16.01:104,16,0	1/1:3,4:8:8:52,8,0	1/1:2,7:10:16.97:122,17,0	0/1:11,3:14:10.07:61,0,10	0/0:8,0:8:5.84:0,6,40	1/1:6,8:16:16.65:108,17,0	0/1:21,0:22:11.76:12,0,125	0/0:14,0:20:14.99:0,15,134	0/0:8,0:8:8.77:0,9,59	0/0:3,0:4:2.84:0,3,14	0/1:8,1:14:7.20:17,0,7	1/1:7,1:9:7.99:52,8,0	1/1:2,4:6:2.99:23,3,0	1/1:15,9:27:35.89:249,36,0	1/1:7,4:12:7.99:52,8,0	1/1:4,3:8:7.70:52,8,0	1/1:12,4:17:8.09:53,8,0	0/0:5,0:5:0:0,0,0
chr10	29798413	.	T	TA	4722.24	PASS	AB=0.704;AC=46;AF=0.821;AN=56;BaseQRankSum=-0.627;DP=446;FS=3.024;HRun=13;HaplotypeScore=73.8852;InbreedingCoeff=0.2198;MQ=70.15;MQ0=0;MQRankSum=-0.775;QD=11.27;ReadPosRankSum=-0.765;VQSLOD=4.4694;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,2:22:26.55:158,27,0	1/1:0,5:5:9:80,9,0	0/0:15,0:9:7.26:0,7,60	0/0:12,0:8:8.10:0,8,48	0/1:11,11:22:43.17:161,0,43	1/1:4,8:12:6.01:55,6,0	1/1:2,10:12:17.97:159,18,0	1/1:10,12:22:18:274,18,0	1/1:4,14:19:26.87:237,27,0	1/1:2,11:13:32.94:283,33,0	0/1:7,2:9:8.66:56,0,9	0/1:13,7:21:13.47:295,0,13	1/1:6,10:17:20.86:182,21,0	1/1:3,6:9:18.02:167,18,0	1/1:1,0:13:14.31:75,14,0	1/1:3,9:13:21:188,21,0	1/1:1,4:20:28.73:171,29,0	1/1:3,1:22:34.29:186,34,0	1/1:6,2:19:41.33:287,41,0	1/1:5,3:22:45.37:281,45,0	1/1:3,0:7:5.52:26,6,0	0/1:7,2:9:4.37:84,0,4	1/1:4,15:19:33.03:302,33,0	1/1:1,16:18:9.29:217,9,0	1/1:2,12:15:20.86:182,21,0	0/1:8,14:22:2.18:249,0,2	1/1:3,20:27:38.36:298,38,0	0/1:3,7:10:26.15:69,0,26
chr10	29798459	.	CT	C	231.27	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.010;DP=573;FS=3.533;HRun=2;HaplotypeScore=82.1794;InbreedingCoeff=0.9169;MQ=89.10;MQ0=0;MQRankSum=-6.139;QD=7.97;ReadPosRankSum=-0.313;VQSLOD=0.8813;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:9,20:29:44.51:326,45,0	0/0:6,0:6:12.04:0,12,180	0/0:23,0:23:66.10:0,66,912	0/0:22,0:22:54.83:0,55,864	0/0:21,0:21:63.19:0,63,898	0/0:16,0:16:39.10:0,39,526	0/0:21,0:21:57.17:0,57,814	0/0:23,0:23:69.17:0,69,967	0/0:26,0:26:72.24:0,72,1076	0/0:26,0:26:78.26:0,78,1143	0/0:15,0:15:42.13:0,42,609	0/0:26,0:26:78.23:0,78,1126	0/0:30,0:30:75.21:0,75,1117	0/0:11,0:11:33.11:0,33,494	0/0:15,0:15:30.09:0,30,428	0/0:20,0:20:57.18:0,57,833	0/0:26,0:26:66.18:0,66,963	0/0:18,0:18:48.16:0,48,718	0/0:24,0:24:69.22:0,69,998	0/0:20,0:20:60.19:0,60,878	0/0:19,0:19:57.19:0,57,854	0/0:9,0:9:27.08:0,27,383	0/0:20,0:20:45.15:0,45,670	0/0:31,0:31:72.23:0,72,1059	0/0:22,0:22:57.16:0,57,813	0/0:25,0:25:75.25:0,75,1123	0/0:24,0:24:57.18:0,57,834	0/0:5,0:5:9.03:0,9,135
chr10	29798465	.	CTTCTTAAACT	C	1436.30	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.433;DP=581;FS=1.896;HRun=0;HaplotypeScore=178.0614;InbreedingCoeff=0.9298;MQ=91.92;MQ0=0;MQRankSum=-6.748;QD=57.45;ReadPosRankSum=-0.704;VQSLOD=3.5592;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,20:25:45.63:1531,46,0	0/0:6,0:6:15.05:0,15,710	0/0:26,0:26:60.60:0,61,3286	0/0:25,0:25:75.13:0,75,3228	0/0:21,0:21:60.15:0,60,2617	0/0:16,0:16:39.13:0,39,2062	0/0:21,0:21:57.20:0,57,3018	0/0:24,0:24:72.24:0,72,3411	0/0:26,0:26:72.25:0,72,3797	0/0:28,0:28:81.25:0,81,3663	0/0:16,0:16:48.16:0,48,2435	0/0:25,0:25:75.24:0,75,3648	0/0:31,0:31:81.27:0,81,4221	0/0:12,0:12:36.09:0,36,1352	0/0:14,0:14:30.09:0,30,1499	0/0:21,0:21:60.21:0,60,3209	0/0:25,0:25:63.22:0,63,3193	0/0:18,0:18:51.18:0,51,2674	0/0:24,0:24:72.22:0,72,2872	0/0:20,0:20:60.19:0,60,2703	0/0:21,0:21:63.22:0,63,3379	0/0:9,0:9:27.09:0,27,1444	0/0:20,0:20:48.95:0,49,2139	0/0:31,0:31:75.26:0,75,3976	0/0:22,0:22:60.20:0,60,3071	0/0:26,0:26:78.26:0,78,3847	0/0:24,0:24:57.20:0,57,3113	0/0:4,0:4:9.03:0,9,491
chr10	29799011	.	G	GGTGT	3527.27	PASS	AB=0.910;AC=38;AF=0.826;AN=46;BaseQRankSum=-4.117;DP=594;FS=2.554;HRun=0;HaplotypeScore=117.7518;InbreedingCoeff=0.2795;MQ=65.32;MQ0=28;MQRankSum=1.055;QD=8.18;ReadPosRankSum=-1.502;VQSLOD=2.6220;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:32:11.42:0,11,101	./.	./.	./.	1/1:7,3:12:6.02:141,6,0	1/1:15,2:21:14.01:246,14,0	1/1:23,1:27:28.68:405,29,0	./.	0/0:15,0:22:21.02:0,21,195	0/1:30,0:28:15.71:302,0,16	./.	1/1:19,0:18:3.01:43,3,0	1/1:13,0:17:19.92:245,20,0	0/1:16,0:16:5.74:81,0,6	1/1:17,1:21:15.03:269,15,0	1/1:12,7:22:11.99:231,12,0	0/1:23,11:38:11.06:395,0,11	1/1:7,5:14:5.75:83,6,0	1/1:17,0:16:2.80:13,3,0	1/1:12,0:11:6.02:99,6,0	1/1:30,5:38:2.53:70,3,0	1/1:9,2:13:3.01:70,3,0	0/1:10,0:10:0:0,0,0	1/1:20,11:34:14.79:294,15,0	1/1:15,0:15:6.01:63,6,0	1/1:15,1:16:12.50:220,12,0	1/1:13,1:19:9.65:123,10,0	1/1:9,0:13:6.02:136,6,0
chr10	29800982	.	AT	A	945.85	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.636;DP=606;FS=7.467;HRun=3;HaplotypeScore=57.3706;InbreedingCoeff=0.9812;MQ=91.15;MQ0=0;MQRankSum=-4.794;QD=31.53;ReadPosRankSum=1.997;VQSLOD=3.5371;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,29:30:84.26:1041,84,0	0/0:8,0:8:24.07:0,24,329	0/0:22,0:22:60.19:0,60,813	0/0:27,0:27:69.17:0,69,909	0/0:18,0:18:54.18:0,54,775	0/0:20,0:20:60.20:0,60,862	0/0:27,0:27:78.24:0,78,1103	0/0:35,0:35:99:0,99,1395	0/0:18,0:18:54.14:0,54,753	0/0:18,0:18:54.17:0,54,759	0/0:11,0:11:33.11:0,33,475	0/0:23,0:23:69.23:0,69,992	0/0:17,0:17:51.16:0,51,717	0/0:18,0:18:54.16:0,54,743	0/0:29,0:29:87.29:0,87,1252	0/0:21,0:21:63.20:0,63,889	0/0:45,0:45:99:0,132,1876	0/0:21,0:21:60.16:0,60,821	0/0:10,0:10:27.07:0,27,369	0/0:20,0:20:60.13:0,60,822	0/0:33,0:33:96.32:0,96,1381	0/0:18,0:18:54.17:0,54,761	0/0:14,0:14:42.14:0,42,604	0/0:20,0:20:60.20:0,60,864	0/0:19,0:19:51.16:0,51,716	0/0:35,0:35:99:0,102,1434	0/0:23,0:23:69.15:0,69,931	0/0:6,0:6:15.04:0,15,198
chr10	29802153	.	A	AGTGT	22006.27	PASS	AB=0.931;AC=48;AF=0.857;AN=56;BaseQRankSum=-4.231;DP=977;FS=5.647;HRun=0;HaplotypeScore=227.7528;InbreedingCoeff=0.6845;MQ=57.04;MQ0=10;MQRankSum=-2.715;QD=26.58;ReadPosRankSum=2.461;VQSLOD=4.3760;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:33:26.27:125,26,0	1/1:4,6:10:18.06:443,18,0	0/0:44,0:28:18.36:0,18,463	0/0:55,0:34:29.53:0,30,654	1/1:21,22:44:65.43:1381,65,0	1/1:13,10:24:23.82:521,24,0	1/1:17,9:31:8.89:886,9,0	1/1:33,2:33:58.88:865,59,0	0/0:48,0:49:96.26:0,96,1484	1/1:28,21:49:99:2203,105,0	1/1:11,15:26:24.08:569,24,0	1/1:28,29:58:90.87:1979,91,0	1/1:18,18:35:71.74:1534,72,0	1/1:19,26:46:68.82:1587,69,0	1/1:31,3:33:16.72:324,17,0	1/1:16,19:35:60.17:1356,60,0	1/1:22,4:28:28.27:541,28,0	0/1:19,1:20:27.09:279,0,27	1/1:19,2:20:23.92:403,24,0	1/1:26,6:30:29.40:421,29,0	0/1:45,2:48:41.20:105,0,41	1/1:23,12:36:59.88:1185,60,0	1/1:18,9:28:24.02:440,24,0	1/1:16,21:40:59.47:1223,59,0	1/1:15,10:25:18.06:444,18,0	1/1:20,18:40:80.29:1473,80,0	1/1:12,12:25:53.39:1085,53,0	1/1:8,7:14:30.05:635,30,0
chr10	29802176	.	GTGTA	G	938.60	PASS	AB=0.953;AC=14;AF=0.250;AN=56;BaseQRankSum=-2.822;DP=997;FS=36.541;HRun=0;HaplotypeScore=315.6443;InbreedingCoeff=-0.1493;MQ=46.17;MQ0=17;MQRankSum=-1.671;QD=2.17;ReadPosRankSum=-5.725;VQSLOD=0.0691;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:38:15.97:0,16,392	0/0:11,0:11:28.04:0,28,603	0/0:32,0:13:16.49:0,16,544	0/0:44,0:16:36.27:0,36,722	0/0:50,0:48:25.81:0,26,1523	0/1:20,1:21:5.04:5,0,684	0/1:44,0:44:17:17,0,1317	0/0:43,1:40:22.56:0,23,1821	0/0:47,1:48:99:0,117,2790	0/0:46,0:45:4.69:0,5,2124	0/0:28,0:28:3.86:0,4,294	0/1:55,0:55:1.51:2,0,1361	0/0:40,0:40:2.52:0,3,1706	0/0:48,0:48:25.69:0,26,1539	0/1:39,9:45:22.82:96,0,23	0/0:33,0:33:13.28:0,13,1357	0/1:19,4:22:17.51:267,0,18	0/1:17,3:20:58.23:138,0,58	0/1:30,1:24:99:230,0,159	1/1:34,5:36:14.58:178,15,0	0/1:53,3:53:32.05:67,0,32	0/1:29,0:29:62.93:63,0,656	0/1:25,0:25:12.48:12,0,386	0/0:45,0:45:19.73:0,20,1193	0/0:19,0:19:24.38:0,24,600	0/0:36,0:35:7.81:0,8,1562	0/1:29,0:28:6.20:6,0,841	0/1:12,0:11:8.46:8,0,437
chr10	29802193	.	A	AGT	355.25	PASS	AB=0.832;AC=6;AF=0.107;AN=56;BaseQRankSum=4.714;DP=973;FS=3.464;HRun=0;HaplotypeScore=296.3648;InbreedingCoeff=0.1181;MQ=44.38;MQ0=16;MQRankSum=-4.415;QD=2.31;ReadPosRankSum=-1.454;VQSLOD=2.0562;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,8:38:13.17:0,13,131	0/0:13,0:13:36.09:0,36,438	0/0:28,0:9:16.23:0,16,160	0/0:37,0:9:21:0,21,231	0/0:47,0:46:71.95:0,72,892	0/0:20,0:20:35.22:0,35,428	0/0:42,0:42:62.76:0,63,762	0/0:49,0:45:99:0,102,1275	0/0:43,0:43:91.13:0,91,1135	0/0:44,0:43:99:0,104,1303	0/0:24,0:24:20.97:0,21,237	0/0:50,0:50:53.48:0,53,871	0/0:38,0:38:90.22:0,90,1120	0/0:52,0:52:89.97:0,90,1105	0/1:29,19:47:37.10:37,0,59	0/0:40,0:40:75.22:0,75,942	0/1:15,1:16:0.51:1,0,66	0/1:12,3:16:50.80:176,0,51	0/1:26,3:21:73.53:209,0,74	1/1:27,14:38:0.10:41,0,0	0/0:39,8:47:1.06:0,1,8	0/0:25,0:25:45.13:0,45,570	0/0:27,0:27:27.07:0,27,336	0/0:46,0:46:72.18:0,72,897	0/0:19,0:19:30.10:0,30,389	0/0:39,0:38:90.67:0,91,1133	0/0:31,0:30:60.04:0,60,704	0/0:13,0:12:23.87:0,24,311
chr10	29802225	.	T	TGTGA	30950.45	PASS	AB=0.980;AC=49;AF=0.875;AN=56;BaseQRankSum=-7.820;DP=1016;FS=5.478;HRun=0;HaplotypeScore=228.3587;InbreedingCoeff=0.4989;MQ=45.79;MQ0=13;MQRankSum=7.802;QD=33.64;ReadPosRankSum=3.968;VQSLOD=4.1685;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:20,17:36:13.08:332,13,0	1/1:3,10:13:27.09:694,27,0	0/0:49,0:17:37.92:0,38,634	0/0:46,0:18:43.83:0,44,814	1/1:5,33:39:42.12:1149,42,0	1/1:14,13:26:31.14:1000,31,0	1/1:20,21:41:56.58:1328,57,0	1/1:24,20:42:99:2189,105,0	1/1:9,37:47:34.41:2189,34,0	1/1:15,33:47:99:3224,135,0	1/1:5,17:22:30.09:730,30,0	1/1:25,31:56:76.24:1733,76,0	1/1:8,25:33:84.24:2093,84,0	1/1:6,40:48:66.14:1746,66,0	1/1:61,0:59:33.53:294,34,0	1/1:3,41:45:65.97:1762,66,0	0/1:22,0:22:38.05:100,0,38	0/1:19,0:19:99:252,0,116	0/1:15,1:13:12.66:320,0,13	1/1:39,0:36:16.69:217,17,0	1/1:60,0:56:10.30:133,10,0	1/1:6,17:23:33.06:902,33,0	1/1:10,15:25:36.02:942,36,0	1/1:17,27:47:65.99:1684,66,0	1/1:6,10:16:33.11:832,33,0	1/1:9,39:49:99:3065,131,0	1/1:4,25:31:53.59:1386,54,0	1/1:3,7:10:26.12:655,26,0
chr10	29802228	.	A	AGTG	2549.71	PASS	AB=0.997;AC=28;AF=0.500;AN=56;BaseQRankSum=0.880;DP=971;FS=6.304;HRun=0;HaplotypeScore=286.9857;InbreedingCoeff=0.1690;MQ=46.21;MQ0=11;MQRankSum=5.421;QD=3.82;ReadPosRankSum=12.464;VQSLOD=0.0433;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:38,1:38:11.13:44,11,0	0/1:14,0:14:0.15:61,0,0	0/0:47,0:17:41.91:0,42,669	0/0:46,0:20:53.82:0,54,867	1/1:35,1:36:36.15:141,36,0	0/1:24,0:23:56.54:75,0,57	0/1:34,0:34:18.50:83,0,19	0/1:48,0:45:99:134,0,380	0/1:46,0:46:23.97:207,0,24	0/1:47,0:46:72.92:258,0,73	0/1:21,0:21:5.17:48,0,5	0/1:50,1:51:84.91:153,0,85	0/1:35,0:35:34.29:204,0,34	1/1:44,0:44:17.86:192,18,0	0/0:58,0:59:12.62:0,13,214	1/1:42,0:42:37.56:212,38,0	0/0:21,0:21:20.50:0,21,126	0/0:21,0:22:37.24:0,37,420	0/0:15,0:13:10.94:0,11,153	0/0:33,0:30:14.82:0,15,125	0/0:60,0:56:10.08:0,10,78	1/1:23,0:23:28.27:113,28,0	1/1:21,1:22:23.10:118,23,0	0/1:45,0:44:62.54:135,0,63	0/1:15,0:15:38.94:50,0,39	0/1:44,1:45:99:222,0,143	1/1:28,0:28:25.35:204,25,0	1/1:8,0:8:19.50:86,20,0
chr10	29802231	.	TGTGA	T	755.91	PASS	AB=0.959;AC=10;AF=0.179;AN=56;BaseQRankSum=3.571;DP=991;FS=33.537;HRun=0;HaplotypeScore=304.7896;InbreedingCoeff=0.4923;MQ=46.68;MQ0=9;MQRankSum=-3.756;QD=3.24;ReadPosRankSum=-5.185;VQSLOD=0.7363;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:38:14.75:0,15,371	0/0:14,0:14:28.92:0,29,655	0/0:46,0:15:38.78:0,39,768	0/0:44,0:20:50.72:0,51,981	0/0:38,0:38:48.03:0,48,1221	0/0:23,0:22:45.13:0,45,1171	0/0:32,0:32:32.77:0,33,878	0/0:47,0:44:30.35:0,30,2158	0/0:47,0:47:84.16:0,84,2441	0/0:48,0:48:63.20:0,63,2874	0/0:21,0:21:30.10:0,30,774	0/0:50,0:50:62.55:0,63,1617	0/0:36,0:36:82.48:0,82,1962	0/0:45,0:45:71.94:0,72,1847	1/1:55,8:62:13.50:330,14,0	0/0:44,0:44:46.93:0,47,1668	0/1:20,1:21:80.30:95,0,80	0/1:19,3:22:99:174,0,118	0/1:18,0:16:71.59:72,0,78	1/1:36,1:34:13.55:83,14,0	1/1:63,1:61:16.35:133,16,0	0/0:23,0:23:32.85:0,33,772	0/0:22,0:22:32.90:0,33,819	0/0:49,0:48:83.76:0,84,1999	0/0:15,0:15:36.12:0,36,920	0/0:47,0:47:99:0,102,3092	0/0:28,0:28:23.17:0,23,1044	0/1:8,0:8:27.26:27,0,389
chr10	29802309	.	A	AGT	20237.13	PASS	AB=0.714;AC=51;AF=0.911;AN=56;BaseQRankSum=-2.051;DP=1196;FS=0.000;HRun=0;HaplotypeScore=243.1687;InbreedingCoeff=0.7570;MQ=51.94;MQ0=24;MQRankSum=7.337;QD=18.52;ReadPosRankSum=4.645;VQSLOD=4.6709;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:13,40:52:71.74:1204,72,0	1/1:15,0:15:25.32:191,25,0	0/0:54,0:18:24.32:0,24,518	0/0:49,0:17:10.83:0,11,213	1/1:30,0:29:46.31:319,46,0	1/1:26,0:26:38.02:335,38,0	1/1:46,1:46:58.45:438,58,0	1/1:49,6:51:99:893,107,0	1/1:16,37:52:99:2019,120,0	1/1:49,2:48:99:1076,126,0	1/1:23,2:22:32:210,32,0	1/1:61,0:61:79.02:491,79,0	1/1:50,0:49:82.13:449,82,0	1/1:44,0:43:86.54:625,87,0	1/1:13,49:64:67.76:1646,68,0	1/1:50,0:48:97.22:651,97,0	1/1:9,19:29:60.41:1025,60,0	1/1:10,15:24:28.05:832,28,0	0/1:12,8:18:70.43:469,0,70	1/1:8,33:41:66.23:1131,66,0	1/1:34,76:107:99:3151,190,0	1/1:36,0:35:54.19:345,54,0	1/1:25,0:25:23.14:128,23,0	1/1:59,0:58:99:879,108,0	1/1:37,0:35:63.50:379,64,0	1/1:49,0:47:97.29:889,97,0	1/1:28,0:28:53.75:304,54,0	1/1:10,0:10:25:157,25,0
chr10	29802316	.	GTA	G	19582.99	PASS	AB=0.981;AC=38;AF=0.679;AN=56;BaseQRankSum=-10.536;DP=1205;FS=24.188;HRun=0;HaplotypeScore=240.5741;InbreedingCoeff=0.7948;MQ=51.72;MQ0=26;MQRankSum=0.999;QD=23.88;ReadPosRankSum=-0.106;VQSLOD=3.6913;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:52,3:54:41.70:0,42,637	1/1:0,16:16:27.06:392,27,0	0/0:53,0:18:36.45:0,36,751	0/0:41,0:15:7.43:0,7,483	1/1:7,26:32:57.12:766,57,0	1/1:7,20:27:44.85:604,45,0	1/1:2,44:45:63.14:941,63,0	1/1:9,47:52:99:1623,140,0	0/1:50,2:51:26.23:26,0,880	1/1:2,49:48:99:1949,141,0	1/1:4,20:21:33.11:503,33,0	1/1:2,53:55:86.78:1309,87,0	1/1:1,52:52:95.41:1456,95,0	1/1:11,37:47:99:1499,111,0	0/1:62,0:62:14.48:14,0,745	1/1:11,39:48:99:1567,108,0	0/0:29,1:30:38.02:0,38,580	0/0:28,1:29:3.30:0,3,424	0/0:23,0:19:15.29:0,15,315	0/0:45,1:46:87.44:0,87,775	0/0:104,3:104:67.77:0,68,1550	1/1:1,38:38:57.19:870,57,0	1/1:0,26:26:24.08:366,24,0	1/1:10,47:56:99:1593,111,0	1/1:2,35:35:66.22:1008,66,0	1/1:4,46:49:80.87:1817,81,0	1/1:2,25:27:57.19:870,57,0	1/1:3,7:10:30.06:410,30,0
chr10	29802421	.	T	TGTGA	16631.32	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-16.082;DP=958;FS=2.128;HRun=0;HaplotypeScore=197.7694;InbreedingCoeff=0.9453;MQ=52.29;MQ0=16;MQRankSum=1.187;QD=38.77;ReadPosRankSum=-3.289;VQSLOD=4.4729;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,106,2133	1/1:2,7:9:24.08:556,24,0	0/0:45,0:24:47.47:0,47,1034	0/0:71,0:33:75.35:0,75,1326	1/1:17,8:26:39.11:814,39,0	1/1:9,8:17:27.09:663,27,0	1/1:14,10:23:60.18:1387,60,0	1/1:11,0:3:3:26,3,0	0/0:59,0:59:99:0,144,2626	1/1:2,23:29:72.19:1597,72,0	1/1:6,15:21:30.09:650,30,0	1/1:14,25:39:55:1268,55,0	1/1:5,26:34:69.12:1822,69,0	1/1:15,15:30:32.89:644,33,0	0/0:84,0:82:99:0,110,1928	1/1:6,45:55:84.17:2235,84,0	0/0:42,1:42:33.25:0,33,1645	0/0:31,1:32:8.07:0,8,1304	0/0:24,0:20:60.20:0,60,981	0/0:26,0:25:41.84:0,42,708	0/0:93,0:90:99:0,231,3770	1/1:15,8:23:27.09:647,27,0	1/1:1,8:11:6.02:164,6,0	1/1:11,13:24:42.08:976,42,0	1/1:2,18:20:33.11:904,33,0	1/1:6,10:16:39.13:965,39,0	1/1:7,16:24:15.05:410,15,0	1/1:4,12:16:33.11:903,33,0
chr10	29802423	.	T	TG	1516.42	PASS	AB=0.997;AC=24;AF=0.429;AN=56;BaseQRankSum=13.913;DP=918;FS=2.700;HRun=1;HaplotypeScore=197.2520;InbreedingCoeff=0.1005;MQ=52.61;MQ0=22;MQRankSum=5.131;QD=3.87;ReadPosRankSum=1.257;VQSLOD=0.3727;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,117,1597	0/1:8,0:8:30.98:37,0,31	0/0:48,0:23:65.18:0,65,819	0/0:68,0:32:78.54:0,79,1009	0/1:22,0:22:23.86:24,0,79	1/1:16,0:16:21.21:88,21,0	0/1:26,0:25:74:145,0,74	0/1:11,0:3:17.89:18,0,37	0/0:58,0:58:99:0,147,2032	0/1:27,0:27:99:114,0,100	1/1:21,0:21:2.55:112,3,0	0/1:40,0:40:39.38:119,0,39	1/1:29,0:29:19.54:183,20,0	0/1:24,0:24:37.45:37,0,89	0/0:83,0:81:99:0,111,1430	1/1:46,2:48:69.83:310,70,0	0/0:39,0:39:99:0,100,1331	0/0:31,0:31:78.62:0,79,1088	0/0:26,0:22:64.05:0,64,789	0/0:26,0:25:42.11:0,42,537	0/0:95,0:92:99:0,227,2981	1/1:20,1:21:16.73:74,17,0	1/1:11,0:11:5.36:22,5,0	0/1:22,1:23:27.85:124,0,28	0/1:20,0:20:10.68:88,0,11	0/1:16,0:15:61.97:74,0,62	0/1:16,0:16:21.26:41,0,21	0/1:13,0:13:5.48:91,0,5
chr10	29802425	.	T	TGA	11826.73	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-17.080;DP=943;FS=1.348;HRun=0;HaplotypeScore=178.3198;InbreedingCoeff=0.9263;MQ=52.51;MQ0=28;MQRankSum=4.237;QD=37.66;ReadPosRankSum=3.663;VQSLOD=5.8656;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,114,1692	0/0:8,0:8:21.06:0,21,270	0/0:49,0:23:61.93:0,62,828	0/0:69,0:31:74.90:0,75,1063	0/0:23,0:23:41.85:0,42,594	0/0:17,0:17:19.97:0,20,276	0/0:25,0:24:49.32:0,49,798	0/0:11,0:3:0.59:0,1,42	0/0:58,0:58:99:0,141,2095	0/0:28,0:28:71.82:0,72,872	0/0:19,0:19:27.09:0,27,369	0/0:42,0:42:53.01:0,53,769	0/0:31,0:31:71.64:0,72,802	0/0:24,0:24:32.96:0,33,433	1/1:2,83:83:99:2143,110,0	0/0:49,0:49:83.76:0,84,1037	1/1:7,33:39:69.64:1916,70,0	1/1:6,26:32:55.65:1552,56,0	1/1:6,22:23:60.14:1117,60,0	1/1:2,27:29:42.03:773,42,0	1/1:20,79:95:99:4325,235,0	0/0:21,0:21:20.86:0,21,330	0/0:12,0:12:6.02:0,6,83	0/0:24,0:24:38.01:0,38,516	0/0:22,0:22:39.13:0,39,543	0/0:16,0:15:45.14:0,45,595	0/0:17,0:17:15.19:0,15,190	0/0:14,0:14:36.11:0,36,472
chr10	29802555	.	TGTGA	T	20300.62	PASS	AB=0.575;AC=25;AF=0.446;AN=56;BaseQRankSum=5.005;DP=1349;FS=1.425;HRun=0;HaplotypeScore=258.9877;InbreedingCoeff=0.0671;MQ=53.26;MQ0=50;MQRankSum=0.692;QD=25.06;ReadPosRankSum=3.889;VQSLOD=4.5868;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:20,35:54:64.69:1048,0,65	0/1:4,17:21:45:477,0,45	0/0:70,0:17:37.96:0,38,700	0/0:88,0:21:34.01:0,34,779	0/1:7,26:33:52.35:369,0,52	1/1:9,18:27:23.87:883,24,0	0/1:10,36:46:81.84:547,0,82	0/1:11,47:44:30.98:1512,0,31	0/0:58,0:58:99:0,169,4219	0/1:12,40:49:43.78:1829,0,44	0/1:6,22:28:31.45:423,0,31	1/1:13,47:60:26.01:1669,26,0	1/1:6,49:54:8.51:1830,9,0	1/1:13,47:60:25.82:1635,26,0	0/0:76,0:74:99:0,177,4503	1/1:13,72:85:78.44:2449,78,0	0/0:41,0:40:96.96:0,97,2270	0/0:38,0:38:98.63:0,99,2319	0/0:37,0:29:78.27:0,78,1989	0/0:22,0:22:29.28:0,29,726	0/0:109,0:104:99:0,220,5537	1/1:6,31:35:16.20:779,16,0	0/1:7,14:21:5.26:373,0,5	0/1:19,40:58:27.37:1415,0,27	0/1:6,19:24:74.24:346,0,74	0/1:14,43:57:99:2032,0,180	0/1:5,15:20:21.90:476,0,22	0/1:4,7:11:38.64:210,0,39
chr10	29802559	.	AGT	A	3885.08	PASS	AB=0.976;AC=33;AF=0.589;AN=56;BaseQRankSum=17.446;DP=1319;FS=1.514;HRun=0;HaplotypeScore=287.1213;InbreedingCoeff=0.5923;MQ=53.10;MQ0=42;MQRankSum=3.017;QD=4.97;ReadPosRankSum=4.350;VQSLOD=2.2236;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:52,0:53:34.26:135,0,34	0/1:20,2:22:3.09:142,0,3	0/0:71,0:17:1.07:0,1,430	0/0:88,0:24:44.95:0,45,694	1/1:33,0:33:1.72:75,2,0	1/1:24,1:25:45.99:222,46,0	1/1:40,0:40:26.63:110,27,0	0/1:56,0:45:78.09:156,0,78	0/0:58,0:58:99:0,160,2803	1/1:50,0:47:44.60:303,45,0	1/1:28,1:29:27.40:146,27,0	1/1:57,0:57:82.41:347,82,0	1/1:57,1:58:52.48:345,52,0	1/1:56,0:56:81.33:343,81,0	0/0:78,0:76:99:0,169,2949	1/1:86,0:86:99:499,112,0	0/0:40,0:39:82.97:0,83,1446	0/0:35,0:37:53.02:0,53,1515	0/0:35,0:28:78.26:0,78,1362	0/0:23,0:23:29.73:0,30,534	0/0:104,0:101:99:0,208,3637	1/1:32,1:32:38.54:185,39,0	1/1:16,1:17:23.97:122,24,0	1/1:54,1:54:22.14:236,22,0	1/1:25,0:24:14.07:58,14,0	0/1:54,0:54:12.67:271,0,13	1/1:17,0:16:27.25:145,27,0	0/1:11,0:11:17.47:45,0,17
chr10	29802603	.	AGT	A	3552.02	PASS	AB=0.762;AC=11;AF=0.196;AN=56;BaseQRankSum=-5.034;DP=1009;FS=1.342;HRun=0;HaplotypeScore=247.3020;InbreedingCoeff=0.8670;MQ=46.14;MQ0=30;MQRankSum=-0.325;QD=17.24;ReadPosRankSum=-0.056;VQSLOD=3.4586;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,3:43:32.91:0,33,566	0/0:10,0:10:24.08:0,24,375	0/0:34,0:9:15.52:0,16,244	0/0:60,0:18:30.72:0,31,503	0/0:26,0:26:27.05:0,27,463	0/0:29,0:28:53.93:0,54,837	0/0:39,0:40:48.09:0,48,795	0/0:74,0:65:99:0,161,2503	0/0:46,0:46:99:0,126,2117	0/0:46,0:43:99:0,108,1833	0/0:21,0:20:12.02:0,12,199	0/0:48,0:48:68.81:0,69,1122	0/0:45,0:45:98.93:0,99,1585	0/0:55,0:55:74.89:0,75,1241	1/1:12,39:50:57.16:734,57,0	0/0:61,0:61:99:0,103,1799	1/1:6,14:19:36.12:471,36,0	1/1:5,23:28:64.41:829,64,0	0/1:11,5:13:15.22:251,0,15	1/1:2,11:13:15.04:197,15,0	1/1:28,50:75:84.18:1069,84,0	0/0:27,0:25:30.10:0,30,506	0/0:14,0:13:15.03:0,15,230	0/0:37,0:37:42.13:0,42,687	0/0:20,0:19:13.01:0,13,265	0/0:43,0:41:99:0,105,1724	0/0:13,0:12:30.07:0,30,451	0/0:7,0:7:18.06:0,18,307
chr10	29802633	.	A	AGT	8201.27	PASS	AB=0.943;AC=46;AF=0.821;AN=56;BaseQRankSum=2.015;DP=785;FS=1.148;HRun=0;HaplotypeScore=191.8605;InbreedingCoeff=0.3206;MQ=38.37;MQ0=59;MQRankSum=-0.913;QD=12.46;ReadPosRankSum=-1.593;VQSLOD=4.6056;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:23,11:33:6.01:103,6,0	1/1:7,3:11:13.29:189,13,0	0/0:36,0:3:3.01:0,3,34	0/0:44,0:2:3.01:0,3,39	1/1:11,13:24:20.79:332,21,0	1/1:6,19:24:30.08:514,30,0	1/1:13,15:29:26.60:421,27,0	0/1:41,17:37:29.32:220,0,29	0/0:47,0:47:99:0,129,1639	1/1:16,19:33:78.17:1180,78,0	1/1:6,8:12:3.01:51,3,0	1/1:11,23:34:32.97:540,33,0	1/1:17,21:39:66.17:993,66,0	1/1:22,26:48:24.44:411,24,0	1/1:37,0:37:9.89:97,10,0	1/1:25,26:51:48.08:765,48,0	0/1:12,0:12:9.68:14,0,10	0/1:22,0:22:66.67:91,0,67	0/1:9,0:7:8.83:9,0,27	1/1:5,0:5:0.47:1,0,0	1/1:47,0:44:2.63:24,3,0	1/1:9,10:18:18.06:309,18,0	1/1:6,6:12:3.48:52,3,0	1/1:11,12:23:15.05:257,15,0	1/1:10,8:17:7.69:152,8,0	1/1:13,17:30:70.42:1044,70,0	1/1:7,6:14:19.83:279,20,0	1/1:3,3:6:9.03:154,9,0
chr10	29802640	.	GTA	G	1128.96	PASS	AB=0.952;AC=17;AF=0.315;AN=54;BaseQRankSum=-0.748;DP=755;FS=4.396;HRun=0;HaplotypeScore=213.3035;InbreedingCoeff=0.2546;MQ=36.19;MQ0=69;MQRankSum=-1.506;QD=2.99;ReadPosRankSum=-6.777;VQSLOD=0.6252;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,6:33:1.02:0,1,18	0/0:11,1:12:1.90:0,2,53	0/0:42,0:2:3.01:0,3,34	0/0:42,0:1:3.01:0,3,56	0/1:21,1:22:3.94:4,0,115	0/0:26,0:25:30.14:0,30,216	0/1:30,2:31:38.79:107,0,39	0/1:43,1:25:41.18:41,0,116	0/0:44,0:44:99:0,132,2445	0/0:35,0:32:8.85:0,9,547	0/0:11,0:10:2.99:0,3,23	0/0:32,4:36:35.59:0,36,269	0/1:37,2:38:15.79:16,0,353	0/1:48,1:49:3.01:3,0,147	1/1:12,22:34:11.62:106,12,0	0/1:42,6:48:0.42:0,0,273	1/1:9,3:12:19:169,19,0	1/1:8,12:20:36.02:482,36,0	1/1:6,5:9:20.18:224,20,0	./.	1/1:17,21:35:1.78:22,2,0	0/0:18,0:17:17.81:0,18,139	0/0:11,1:11:4.55:0,5,30	0/0:25,1:26:14.92:0,15,115	0/0:16,0:15:3.95:0,4,64	0/1:27,1:28:99:114,0,380	0/0:14,0:14:20.10:0,20,166	0/0:6,0:6:14.88:0,15,111
chr10	29802643	.	T	TGA	263.83	PASS	AB=0.852;AC=4;AF=0.077;AN=52;BaseQRankSum=1.326;DP=741;FS=29.229;HRun=0;HaplotypeScore=220.2548;InbreedingCoeff=0.0828;MQ=35.49;MQ0=74;MQRankSum=-0.843;QD=3.34;ReadPosRankSum=-2.977;VQSLOD=0.7184;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,2:32:5.14:0,5,42	0/0:11,0:11:10.24:0,10,56	./.	0/0:40,0:1:3:0,3,29	0/0:22,0:22:17.42:0,17,116	0/0:25,0:24:26.57:0,27,191	0/0:31,0:30:21.12:0,21,135	0/0:36,0:16:35.71:0,36,225	0/0:45,0:45:99:0,135,2039	0/0:34,0:31:67.63:0,68,459	0/0:12,0:11:2.99:0,3,23	0/0:40,0:40:30.95:0,31,225	0/0:36,0:35:51.54:0,52,408	0/0:48,0:48:18.50:0,19,163	0/1:36,3:39:1.62:8,0,2	0/0:47,0:47:44.69:0,45,362	0/1:7,4:11:17.68:128,0,18	0/1:16,2:18:99:123,0,141	0/1:9,2:9:44:108,0,44	./.	0/0:34,0:31:0.25:0,0,0	0/0:18,0:18:17.92:0,18,137	0/0:14,0:13:2.51:0,3,18	0/0:27,0:27:14.87:0,15,105	0/0:14,0:13:9.31:0,9,65	0/0:27,0:27:58.26:0,58,399	0/0:15,0:15:6.94:0,7,137	0/0:6,0:6:16.20:0,16,132
chr10	29802649	.	AGT	A	769.20	PASS	AB=0.920;AC=16;AF=0.320;AN=50;BaseQRankSum=-0.769;DP=731;FS=11.116;HRun=0;HaplotypeScore=225.8859;InbreedingCoeff=0.5972;MQ=35.73;MQ0=76;MQRankSum=0.597;QD=4.14;ReadPosRankSum=-3.738;VQSLOD=0.4378;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,3:28:1.26:0,1,4	0/0:11,0:11:5.95:0,6,42	./.	./.	0/0:21,0:21:8:0,8,55	0/0:24,0:23:16.57:0,17,87	1/1:29,0:28:1.28:9,1,0	0/0:23,0:5:8.44:0,8,50	0/0:50,0:50:99:0,135,2249	0/0:36,0:34:76.39:0,76,544	1/1:12,0:11:0.47:1,0,0	0/0:37,0:37:22.84:0,23,149	0/0:40,0:39:11.70:0,12,181	0/0:46,0:47:9.78:0,10,64	1/1:32,9:42:23.65:212,24,0	0/0:39,0:39:19.26:0,19,148	1/1:10,2:12:23.27:189,23,0	0/1:15,3:19:50.11:217,0,50	1/1:10,2:9:13.42:136,13,0	1/1:5,0:4:6:64,6,0	0/1:39,1:35:1.02:89,0,1	0/0:19,0:19:5.89:0,6,39	0/0:14,0:13:4.55:0,5,28	./.	1/1:14,0:13:2.09:7,2,0	0/0:23,0:23:43.87:0,44,327	0/0:16,0:16:23.70:0,24,173	0/0:6,0:6:14.98:0,15,130
chr10	29802651	.	T	TGTGTGA	2144.94	PASS	AB=0.966;AC=12;AF=0.231;AN=52;BaseQRankSum=-3.553;DP=738;FS=19.658;HRun=0;HaplotypeScore=246.8426;InbreedingCoeff=0.4360;MQ=35.67;MQ0=73;MQRankSum=-0.030;QD=12.33;ReadPosRankSum=-4.401;VQSLOD=0.7345;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:30:1.55:0,2,4	0/0:12,0:12:8.79:0,9,64	./.	./.	0/0:21,0:21:12.41:0,12,93	0/0:24,0:23:15.02:0,15,108	0/0:33,0:32:8.06:0,8,47	0/1:24,0:6:2.90:3,0,29	0/0:50,0:50:99:0,138,2966	0/0:37,0:35:73.66:0,74,720	0/0:12,0:11:0.47:0,0,1	0/0:35,0:35:28.99:0,29,215	0/0:40,0:39:38.31:0,38,355	0/0:45,0:45:7.78:0,8,87	1/1:40,2:42:23.91:389,24,0	0/0:39,0:39:19.34:0,19,232	1/1:12,1:13:9.42:520,9,0	0/1:16,3:19:40.68:669,0,41	0/1:13,0:10:64.45:392,0,64	1/1:5,0:4:6.02:88,6,0	1/1:34,9:39:15.03:230,15,0	0/0:20,0:20:1.90:0,2,43	0/0:14,0:13:3.36:0,3,25	0/0:31,0:31:5.98:0,6,48	0/1:15,0:14:3.09:3,0,17	0/0:23,0:23:22.78:0,23,345	0/0:15,0:15:23.68:0,24,298	0/0:6,0:6:13.56:0,14,164
chr10	29802657	.	TGTGA	T	374.02	PASS	AB=0.972;AC=17;AF=0.315;AN=54;BaseQRankSum=3.586;DP=710;FS=36.459;HRun=0;HaplotypeScore=222.4338;InbreedingCoeff=0.0539;MQ=34.85;MQ0=67;MQRankSum=-1.313;QD=1.09;ReadPosRankSum=-3.627;VQSLOD=0.3414;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,1:26:4.82:0,5,71	0/0:12,0:12:2.37:0,2,8	0/0:40,0:1:2.74:0,3,12	./.	0/1:20,0:20:9.60:35,0,10	0/1:21,0:20:4.40:31,0,4	0/1:30,0:29:7.01:13,0,7	0/0:18,0:7:9.84:0,10,87	0/0:53,0:53:99:0,153,3587	0/0:35,0:34:35.25:0,35,311	1/1:12,0:10:2.99:24,3,0	0/1:35,0:35:6.74:7,0,50	0/1:36,0:35:10.62:101,0,11	1/1:43,0:43:4.90:38,5,0	0/0:39,0:39:29.91:0,30,278	0/1:37,0:37:33.82:41,0,34	0/1:12,2:14:80.20:80,0,206	0/1:16,1:18:10.99:11,0,332	0/1:12,2:11:99:120,0,247	0/0:7,0:6:8.97:0,9,102	0/0:44,4:44:33.37:0,33,344	0/1:17,0:16:0.31:0,0,11	0/0:14,0:13:0.89:0,1,2	0/1:29,0:29:0:0,0,0	1/1:14,0:15:2.55:15,3,0	0/0:22,0:21:25.26:0,25,191	0/0:17,0:17:13.17:0,13,49	0/0:5,0:5:13.62:0,14,72
chr10	29802658	.	G	GTA	2873.09	PASS	AB=0.822;AC=23;AF=0.442;AN=52;BaseQRankSum=1.090;DP=703;FS=24.007;HRun=0;HaplotypeScore=206.5122;InbreedingCoeff=-0.0853;MQ=34.53;MQ0=67;MQRankSum=-1.606;QD=7.27;ReadPosRankSum=-3.524;VQSLOD=1.0605;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,1:26:6.73:0,7,51	0/1:11,0:11:19.20:48,0,19	0/0:40,0:1:2.80:0,3,13	./.	1/1:15,5:20:12.04:204,12,0	1/1:12,9:20:0.08:266,0,0	0/1:22,7:28:0.93:1,0,4	0/1:16,1:7:83.58:95,0,84	0/0:52,0:52:99:0,153,2179	0/1:24,10:33:99:562,0,253	1/1:9,3:10:3.01:48,3,0	0/1:20,13:33:54.09:145,0,54	0/1:30,5:34:66.98:467,0,67	0/1:27,16:43:2.39:195,0,2	0/0:39,0:39:23.03:0,23,159	0/1:26,10:36:47.19:161,0,47	0/0:14,0:14:12.05:0,12,94	0/0:18,0:18:4.56:0,5,135	0/1:14,0:11:9.08:9,0,77	0/0:9,0:8:5.43:0,5,34	0/0:51,0:47:37.04:0,37,254	1/1:13,3:15:6.01:86,6,0	1/1:13,1:13:0.35:1,0,0	./.	0/1:11,5:15:0:0,0,1	0/1:12,10:21:99:476,0,119	0/1:15,2:17:99:176,0,103	0/1:3,2:5:46.84:78,0,47
chr10	29802661	.	A	AGT	1617.38	PASS	AB=0.974;AC=26;AF=0.520;AN=50;BaseQRankSum=8.401;DP=657;FS=4.293;HRun=0;HaplotypeScore=189.7589;InbreedingCoeff=0.4477;MQ=35.01;MQ0=62;MQRankSum=-10.185;QD=4.90;ReadPosRankSum=0.673;VQSLOD=3.1395;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:28,1:28:14.54:15,0,89	1/1:9,0:9:3:29,3,0	0/0:37,0:3:6:0,6,52	0/0:30,0:1:3:0,3,26	./.	1/1:20,0:19:10.03:78,10,0	1/1:22,3:24:1.84:20,2,0	0/1:12,1:6:24.37:82,0,24	0/0:52,0:53:99:0,123,1830	1/1:30,0:29:60.19:510,60,0	./.	1/1:30,0:30:22.25:162,22,0	1/1:32,0:31:28.70:277,29,0	1/1:42,0:43:2.92:37,3,0	0/0:31,0:31:31.99:0,32,367	0/1:35,0:35:14.48:106,0,14	0/0:14,0:14:29.80:0,30,257	0/0:16,0:16:44.83:0,45,393	0/0:16,0:11:28.50:0,28,257	0/0:8,0:7:12.03:0,12,139	0/0:48,0:45:50.71:0,51,583	1/1:15,0:14:0.89:2,1,0	1/1:8,0:9:0.89:2,1,0	./.	0/0:15,0:14:0.86:0,1,2	1/1:22,0:21:2.76:189,3,0	1/1:13,0:13:20.61:193,21,0	0/1:5,0:5:7.52:82,0,8
chr10	29802668	.	GTA	G	1751.11	PASS	AB=0.917;AC=28;AF=0.538;AN=52;BaseQRankSum=11.071;DP=660;FS=3.047;HRun=0;HaplotypeScore=179.5014;InbreedingCoeff=0.5246;MQ=34.80;MQ0=58;MQRankSum=-9.798;QD=5.44;ReadPosRankSum=1.969;VQSLOD=3.2061;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,10:31:19.58:0,20,274	1/1:0,9:9:2.90:33,3,0	0/0:41,0:3:9.03:0,9,159	0/0:37,0:5:11.97:0,12,129	0/0:6,8:14:0:0,0,0	1/1:5,11:15:9.46:63,9,0	0/1:12,12:23:2.02:2,0,2	0/0:16,0:9:17.95:0,18,174	0/0:52,1:53:99:0,129,2741	1/1:11,19:29:33.40:533,33,0	./.	1/1:11,18:29:25.64:208,26,0	1/1:7,20:26:35.16:285,35,0	1/1:11,25:36:0.31:25,0,0	0/0:33,0:33:30.14:0,30,576	1/1:7,25:32:11.77:122,12,0	0/1:17,0:17:9.85:10,0,387	0/1:17,0:17:43.78:44,0,447	0/1:19,0:14:9.42:9,0,421	0/0:9,0:8:12.04:0,12,203	0/0:56,1:55:71.99:0,72,1080	1/1:3,11:13:0.89:2,1,0	0/0:2,7:9:1.55:0,2,4	./.	1/1:3,9:11:1.85:6,2,0	1/1:12,10:21:4.52:242,5,0	1/1:2,11:13:22.22:219,22,0	1/1:1,4:5:11.99:119,12,0
chr10	29802674	.	ATGAGTGTG	A	4841.36	PASS	AB=0.679;AC=25;AF=0.481;AN=52;BaseQRankSum=8.847;DP=658;FS=2.838;HRun=0;HaplotypeScore=193.8391;InbreedingCoeff=0.5675;MQ=36.64;MQ0=53;MQRankSum=-7.697;QD=16.30;ReadPosRankSum=2.302;VQSLOD=4.2594;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,8:34:6.94:0,7,945	1/1:2,9:11:2.64:73,3,0	0/0:35,0:3:9.03:0,9,330	0/0:35,0:5:14.97:0,15,536	0/1:3,8:12:0:0,0,0	1/1:7,6:13:5.71:114,6,0	1/1:14,11:24:7.56:69,8,0	0/1:20,0:13:79.40:79,0,276	0/0:50,0:50:99:0,147,5270	1/1:5,19:24:25.01:1381,25,0	./.	1/1:10,15:26:27:524,27,0	1/1:11,19:30:17.17:720,17,0	1/1:5,23:28:9.24:111,9,0	0/0:36,0:36:53.46:0,53,2032	0/1:10,21:31:7.70:351,0,8	0/0:19,0:18:42.83:0,43,1587	0/0:20,0:20:60.08:0,60,1841	0/0:20,0:14:42.12:0,42,1491	0/0:10,0:9:12.04:0,12,536	0/0:69,0:66:92.87:0,93,3819	0/0:5,9:13:0.47:0,0,1	0/1:2,7:9:0:0,0,0	1/1:19,11:31:5.74:36,6,0	./.	1/1:7,9:15:2.42:631,2,0	1/1:2,11:13:24.21:524,24,0	0/1:3,3:6:14.06:228,0,14
chr10	29802686	.	G	GTATGTA	7595.51	PASS	AB=0.964;AC=34;AF=0.607;AN=56;BaseQRankSum=2.789;DP=785;FS=0.794;HRun=0;HaplotypeScore=205.0921;InbreedingCoeff=0.7610;MQ=40.23;MQ0=43;MQRankSum=-2.392;QD=16.99;ReadPosRankSum=-3.534;VQSLOD=3.6826;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:38,1:39:13.58:14,0,696	1/1:11,0:11:5.61:48,6,0	0/0:31,0:8:14.88:0,15,266	0/0:38,0:7:21.03:0,21,403	1/1:14,1:15:6.01:64,6,0	1/1:10,0:10:12.03:259,12,0	1/1:35,0:37:32.36:450,32,0	0/1:40,0:33:99:455,0,379	0/0:45,0:45:99:0,129,3012	1/1:30,0:30:48.71:1277,49,0	1/1:13,0:11:9.02:117,9,0	1/1:32,3:35:52.57:967,53,0	1/1:39,1:39:47.42:1000,47,0	1/1:33,0:32:23.86:266,24,0	0/0:43,0:43:56.19:0,56,1243	1/1:33,1:34:36.30:664,36,0	0/0:21,0:20:40.24:0,40,917	0/0:23,0:23:54.18:0,54,1226	0/0:22,0:17:48.10:0,48,978	0/0:16,0:15:15.05:0,15,343	0/0:89,0:84:99:0,123,2736	1/1:15,1:15:11.73:124,12,0	0/0:9,0:9:0.47:0,0,1	1/1:31,1:31:11.93:138,12,0	1/1:11,0:11:8.86:98,9,0	1/1:16,1:16:40.13:726,40,0	1/1:19,0:19:36.58:508,37,0	1/1:11,0:11:30.08:422,30,0
chr10	29802759	.	A	AGT	8758.24	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-10.313;DP=1160;FS=3.148;HRun=0;HaplotypeScore=242.1246;InbreedingCoeff=0.9993;MQ=55.24;MQ0=12;MQRankSum=0.803;QD=30.52;ReadPosRankSum=1.647;VQSLOD=5.1102;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:82.01:0,82,976	0/0:14,0:14:24.08:0,24,300	0/0:49,0:17:29.51:0,30,296	0/0:58,0:34:43.91:0,44,471	0/0:46,0:47:80.59:0,81,998	0/0:24,0:24:60.19:0,60,750	0/0:40,0:40:45.08:0,45,550	0/0:52,0:48:87.17:0,87,1020	0/0:33,0:33:89.08:0,89,1079	0/0:53,0:52:99:0,114,1415	0/0:18,0:18:30.10:0,30,375	0/0:58,0:58:99:0,117,1456	0/0:57,0:58:99:0,135,1614	0/0:44,0:44:99:0,105,1295	1/1:6,53:60:99:1780,108,0	0/0:71,0:71:99:0,172,2114	1/1:8,30:37:61.88:1544,62,0	1/1:5,17:22:36.12:594,36,0	1/1:8,16:22:54.05:856,54,0	1/1:4,28:33:51.11:826,51,0	1/1:46,63:102:99:3157,200,0	0/0:22,0:22:42.13:0,42,525	0/0:20,0:20:39.12:0,39,488	0/0:60,0:59:99:0,114,1424	0/0:29,0:29:60.19:0,60,750	0/0:38,0:38:99:0,104,1233	0/0:22,0:22:51.15:0,51,624	0/0:13,0:13:33.10:0,33,413
chr10	29803053	.	T	TA	2660.86	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-1.734;DP=491;FS=0.436;HRun=10;HaplotypeScore=125.3663;InbreedingCoeff=0.9702;MQ=71.61;MQ0=0;MQRankSum=-3.365;QD=21.46;ReadPosRankSum=0.776;VQSLOD=2.5451;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,21:28:63.15:666,63,0	0/0:11,0:11:26.96:0,27,221	0/0:20,0:18:17.37:0,17,265	0/0:13,1:11:9.39:0,9,70	0/0:28,0:28:71.22:0,71,570	0/0:18,0:20:54.97:0,55,425	0/0:10,0:10:14.96:0,15,123	0/0:32,0:32:80.95:0,81,699	0/0:19,0:19:47.94:0,48,394	0/0:20,0:20:41.92:0,42,344	0/0:22,0:22:47.47:0,47,366	0/0:15,0:15:41.93:0,42,344	0/0:14,0:14:32.85:0,33,270	0/0:16,0:16:38.90:0,39,314	1/1:4,12:16:39.06:403,39,0	0/0:18,0:18:47.89:0,48,388	1/1:4,13:18:32.92:334,33,0	1/1:6,8:14:22.99:281,23,0	1/1:4,12:16:36.09:383,36,0	1/1:10,17:26:63.05:631,63,0	1/1:0,5:5:15.04:160,15,0	0/0:9,0:9:20.59:0,21,141	0/0:17,0:17:35.93:0,36,295	0/0:4,0:4:8.98:0,9,74	0/0:20,0:20:41.82:0,42,332	0/0:19,0:19:46.69:0,47,374	0/0:26,0:27:55.84:0,56,437	0/0:11,0:11:23.67:0,24,177
chr10	29803080	.	A	AAAAAAAAC	25693.35	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-4.551;DP=533;FS=13.997;HRun=0;HaplotypeScore=125.4169;InbreedingCoeff=0.7801;MQ=56.33;MQ0=0;MQRankSum=-5.393;QD=51.28;ReadPosRankSum=2.304;VQSLOD=4.0207;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,0:28:51.17:1352,51,0	1/1:4,5:12:15.04:549,15,0	0/0:16,0:10:7.47:0,7,104	0/0:16,0:12:23.87:0,24,514	1/1:11,22:40:69.20:2340,69,0	1/1:5,10:17:30.10:1179,30,0	1/1:5,5:17:15.03:574,15,0	1/1:9,9:31:69.17:1689,69,0	1/1:8,5:15:15.03:611,15,0	1/1:7,11:25:44.79:1629,45,0	1/1:7,14:27:45:1318,45,0	1/1:7,7:18:21.07:856,21,0	1/1:4,8:14:18.05:734,18,0	1/1:3,11:18:36.12:1456,36,0	1/1:13,3:17:33.07:847,33,0	1/1:8,10:24:27.09:994,27,0	1/1:12,6:19:16.09:1181,16,0	1/1:13,1:14:20.94:472,21,0	1/1:10,5:14:30.07:888,30,0	1/1:9,12:27:44.51:1454,45,0	1/1:7,0:8:13.28:214,13,0	1/1:1,5:8:15.05:509,15,0	1/1:7,7:17:18.06:613,18,0	1/1:0,2:3:3.01:122,3,0	1/1:7,14:25:33.11:1317,33,0	1/1:7,10:21:42.07:1206,42,0	1/1:11,15:32:33.11:1345,33,0	1/1:4,2:8:6.02:244,6,0
chr10	29803493	.	GGAGAGA	G	7389.38	PASS	AB=0.932;AC=42;AF=0.750;AN=56;BaseQRankSum=-4.136;DP=704;FS=10.551;HRun=0;HaplotypeScore=157.7441;InbreedingCoeff=0.3823;MQ=62.83;MQ0=8;MQRankSum=-0.595;QD=12.15;ReadPosRankSum=-0.188;VQSLOD=3.4098;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:23:35.25:0,35,329	1/1:3,8:12:11.76:111,12,0	0/0:33,0:19:23.07:0,23,232	0/0:24,0:11:8.15:0,8,136	1/1:12,26:38:44.97:562,45,0	1/1:6,29:36:36:499,36,0	1/1:5,15:20:12.51:171,13,0	1/1:35,0:34:40.87:574,41,0	0/0:14,0:13:36.12:0,36,1068	1/1:5,28:33:79.21:1079,79,0	1/1:3,25:29:30.03:376,30,0	1/1:4,19:23:18.06:307,18,0	1/1:6,11:17:6.02:102,6,0	1/1:1,20:21:6.02:128,6,0	0/1:24,0:23:99:136,0,498	1/1:3,17:20:18.06:378,18,0	0/1:33,0:34:37.30:37,0,1089	0/1:32,0:35:76.38:76,0,884	0/1:14,0:15:28.76:213,0,29	0/1:37,0:36:72.80:73,0,802	0/1:13,0:17:6.20:6,0,412	1/1:5,21:27:22.79:404,23,0	1/1:14,5:19:21.58:479,22,0	1/1:18,3:20:20.91:342,21,0	1/1:5,25:30:9.03:128,9,0	1/1:7,18:25:46.72:619,47,0	1/1:4,28:32:21.52:395,22,0	1/1:3,4:7:9.03:192,9,0
chr10	29803536	.	CAA	C	232.15	PASS	AB=0.966;AC=3;AF=0.054;AN=56;BaseQRankSum=3.487;DP=688;FS=2.447;HRun=3;HaplotypeScore=145.4445;InbreedingCoeff=0.5632;MQ=51.61;MQ0=14;MQRankSum=-0.756;QD=4.38;ReadPosRankSum=-1.105;VQSLOD=-0.4051;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:3,22:25:24.05:323,24,0	0/0:12,0:12:15.01:0,15,245	0/0:16,0:4:12.04:0,12,205	0/1:27,1:4:9.52:10,0,51	0/0:28,0:28:29.73:0,30,454	0/0:32,0:32:36.03:0,36,557	0/0:24,1:25:3.39:0,3,474	0/0:31,0:27:74.39:0,74,1308	0/0:19,0:18:53.13:0,53,803	0/0:27,0:26:68.96:0,69,1052	0/0:20,0:20:18.94:0,19,311	0/0:19,0:19:15.03:0,15,177	0/0:17,0:17:30.09:0,30,509	0/0:26,0:26:32.64:0,33,425	0/0:23,0:22:67.94:0,68,1204	0/0:20,0:20:39.06:0,39,546	0/0:37,1:38:99:0,106,1876	0/0:34,0:34:65.28:0,65,1542	0/0:15,0:13:33.09:0,33,546	0/0:35,0:33:93.40:0,93,1138	0/0:20,0:20:44.06:0,44,945	0/0:34,0:34:50.44:0,50,871	0/0:16,0:16:27.76:0,28,368	0/0:30,0:30:62.13:0,62,928	0/0:26,0:26:27.93:0,28,455	0/0:33,0:33:92.57:0,93,1502	0/0:33,0:33:53.78:0,54,902	0/0:6,0:6:15.05:0,15,242
chr10	29803571	.	AGAG	A	53.29	PASS	AB=0.762;AC=1;AF=0.018;AN=56;BaseQRankSum=6.273;DP=770;FS=11.156;HRun=0;HaplotypeScore=140.4092;InbreedingCoeff=-0.0196;MQ=54.38;MQ0=27;MQRankSum=-4.847;QD=3.33;ReadPosRankSum=-2.867;VQSLOD=1.0536;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:25:32.37:0,32,697	0/0:11,0:11:27.09:0,27,554	0/0:71,0:16:39.57:0,40,637	0/0:91,0:25:35.23:0,35,499	0/0:21,0:21:33.07:0,33,719	0/0:22,0:22:42.10:0,42,903	0/0:27,0:27:44.67:0,45,1401	0/0:30,0:27:68.90:0,69,1465	0/1:11,5:15:99:128,0,572	0/0:27,0:27:50.34:0,50,1613	0/0:19,0:19:41.46:0,41,919	0/0:18,0:18:21.07:0,21,475	0/0:23,0:23:60.21:0,60,1325	0/0:20,0:20:48.16:0,48,1029	0/0:25,0:25:72.23:0,72,1580	0/0:20,0:20:48.12:0,48,967	0/0:35,0:36:58.23:0,58,1986	0/0:33,0:33:56.50:0,57,1846	0/0:19,0:17:45.15:0,45,926	0/0:22,0:21:48.12:0,48,1032	0/0:25,0:25:24.12:0,24,1396	0/0:25,0:25:50.89:0,51,1126	0/0:14,0:14:32.82:0,33,741	0/0:31,0:31:60.42:0,60,1364	0/0:18,0:18:39.12:0,39,842	0/0:37,0:37:99:0,108,2399	0/0:36,0:36:99:0,99,2131	0/0:6,0:6:12.04:0,12,271
chr10	29803681	.	AAGACAGAGAG	A	6893.91	PASS	AB=0.649;AC=35;AF=0.625;AN=56;BaseQRankSum=13.705;DP=701;FS=21.738;HRun=0;HaplotypeScore=202.0741;InbreedingCoeff=0.8440;MQ=50.87;MQ0=11;MQRankSum=-4.985;QD=18.63;ReadPosRankSum=-5.806;VQSLOD=0.7012;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,99,3289	1/1:3,4:7:9.03:169,9,0	0/0:37,0:14:17.93:0,18,419	0/0:48,0:13:12.04:0,12,234	1/1:11,10:21:14.91:121,15,0	1/1:14,6:20:27.07:660,27,0	1/1:11,14:25:20.94:433,21,0	1/1:19,22:34:63:691,63,0	0/0:24,0:24:54.19:0,54,2155	1/1:5,14:19:39.11:908,39,0	1/1:6,12:18:29.50:202,30,0	1/1:7,7:14:12:233,12,0	1/1:1,10:11:17.85:191,18,0	1/1:5,26:31:26.83:572,27,0	0/0:34,0:34:81.26:0,81,3101	0/1:11,13:24:52.77:420,0,53	0/0:30,0:30:69.16:0,69,2600	0/0:34,0:33:61.29:0,61,2899	0/0:25,0:19:39.11:0,39,1586	0/0:21,0:21:51.16:0,51,1888	0/0:38,0:38:90.29:0,90,3264	1/1:4,18:22:44.46:296,44,0	1/1:2,17:19:30.05:209,30,0	1/1:15,21:35:9.26:60,9,0	1/1:3,9:12:3.01:38,3,0	1/1:5,16:20:45.10:990,45,0	1/1:7,19:26:26.59:611,27,0	1/1:0,3:3:3.01:92,3,0
chr10	29803904	.	C	CAG	640.22	PASS	AB=0.971;AC=35;AF=0.673;AN=52;BaseQRankSum=-3.303;DP=741;FS=0.000;HRun=0;HaplotypeScore=228.0711;InbreedingCoeff=0.0149;MQ=46.32;MQ0=24;MQRankSum=0.753;QD=1.17;ReadPosRankSum=-0.582;VQSLOD=2.4168;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:2.16:0,2,8	0/1:10,0:10:0:0,0,0	./.	./.	1/1:23,0:22:6.02:75,6,0	1/1:19,0:19:3.01:40,3,0	1/1:20,0:18:4.76:28,5,0	1/1:39,0:35:0.47:2,0,0	1/1:20,0:20:7.54:86,8,0	0/1:29,0:31:8.96:9,0,44	1/1:18,0:18:2.98:22,3,0	0/1:22,1:22:5.56:38,0,6	0/1:27,1:29:8.33:52,0,8	1/1:24,0:23:5.61:52,6,0	0/0:29,0:29:3.99:0,4,54	0/1:24,0:24:9.94:38,0,10	0/1:30,0:30:8.92:9,0,18	0/0:24,0:22:6.02:0,6,47	0/0:33,0:28:5.73:0,6,41	0/1:39,0:37:6.15:6,0,57	1/1:23,0:23:0.84:12,1,0	1/1:20,0:20:2.99:24,3,0	1/1:24,0:24:0.59:46,1,0	0/1:20,1:21:22.69:57,0,23	1/1:23,0:23:2.60:22,3,0	1/1:34,5:38:14.51:122,15,0	0/1:29,2:30:34.72:35,0,52	1/1:13,0:12:0.47:1,0,0
chr10	29803914	.	G	GAA	5095.62	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=2.702;DP=709;FS=23.021;HRun=1;HaplotypeScore=198.7293;InbreedingCoeff=-0.5414;MQ=45.80;MQ0=20;MQRankSum=1.593;QD=8.18;ReadPosRankSum=-3.169;VQSLOD=-0.7530;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:11,16:28:20.77:0,21,172	0/1:12,0:12:17.10:142,0,17	0/0:18,0:4:2.93:0,3,21	0/0:36,0:8:7.63:0,8,39	0/1:25,0:24:49.25:76,0,49	0/1:16,0:16:6.18:221,0,6	0/1:22,0:20:21.42:178,0,21	0/1:35,0:31:99:235,0,201	0/1:21,0:21:90.97:158,0,91	0/1:30,0:30:99:282,0,236	1/1:7,9:17:10.72:93,11,0	0/1:24,0:23:38.60:210,0,39	0/1:33,0:32:99:231,0,170	0/1:24,0:23:31.34:288,0,31	0/1:28,0:28:99:166,0,258	0/1:23,0:23:33.46:258,0,33	0/1:30,0:29:99:111,0,169	0/1:22,0:20:45.77:46,0,205	0/1:31,0:27:99:175,0,222	0/1:36,0:34:99:260,0,151	0/1:26,0:25:37.42:176,0,37	1/1:21,0:21:26.60:345,27,0	1/1:18,1:19:8.48:267,8,0	0/1:24,0:24:64.74:137,0,65	1/1:21,0:21:13.18:273,13,0	0/1:39,0:37:99:407,0,127	0/1:30,0:28:99:316,0,121	0/1:14,0:13:46.21:46,0,104
chr10	29803931	.	AG	A	64.43	PASS	AB=0.810;AC=5;AF=0.089;AN=56;BaseQRankSum=6.554;DP=697;FS=4.920;HRun=1;HaplotypeScore=196.4783;InbreedingCoeff=-0.0913;MQ=48.37;MQ0=18;MQRankSum=-3.395;QD=0.50;ReadPosRankSum=5.251;VQSLOD=-0.5583;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:26:33:0,33,427	0/0:10,0:10:20.70:0,21,274	0/1:10,1:3:8.63:9,0,32	0/0:30,0:10:17.85:0,18,224	0/0:39,0:38:53.96:0,54,632	0/0:18,0:17:32.25:0,32,381	0/0:24,0:22:31.61:0,32,398	0/0:35,0:32:76.96:0,77,892	0/0:18,0:18:16.94:0,17,444	0/0:28,0:28:84.24:0,84,1087	0/0:22,0:22:22.99:0,23,267	0/0:22,0:21:28.29:0,28,378	0/0:32,0:31:71.92:0,72,893	0/0:23,0:22:47.98:0,48,573	0/1:14,10:24:92.47:105,0,92	0/0:21,0:21:32.71:0,33,403	0/1:25,5:29:8.55:9,0,276	0/1:17,8:23:43.09:43,0,225	0/0:19,3:20:16.94:0,17,368	0/1:30,9:37:5.89:6,0,370	0/0:19,0:18:11.55:0,12,115	0/0:20,0:20:23.37:0,23,287	0/0:21,0:21:26.89:0,27,326	0/0:25,0:24:35.17:0,35,439	0/0:23,0:23:29.48:0,29,345	0/0:41,0:39:99:0,111,1445	0/0:28,0:26:63.12:0,63,802	0/0:20,0:18:42.14:0,42,559
chr10	29803933	.	AG	A	163.71	PASS	AB=0.831;AC=5;AF=0.089;AN=56;BaseQRankSum=6.691;DP=706;FS=2.764;HRun=1;HaplotypeScore=191.7943;InbreedingCoeff=-0.1009;MQ=50.44;MQ0=17;MQRankSum=-3.105;QD=1.17;ReadPosRankSum=4.545;VQSLOD=-0.6762;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:26:33.02:0,33,441	0/0:11,0:11:23.68:0,24,297	0/0:12,0:4:9:0,9,97	0/0:31,0:13:10.55:0,11,307	0/0:40,0:39:57.01:0,57,710	0/0:19,0:18:35.25:0,35,417	0/0:23,0:21:28.65:0,29,386	0/0:36,0:32:70.64:0,71,802	0/0:18,0:18:16.89:0,17,420	0/0:29,0:29:84.24:0,84,1079	0/0:25,0:25:35.03:0,35,439	0/0:22,0:21:34.45:0,34,453	0/0:31,0:30:71.92:0,72,891	0/0:22,0:21:45.01:0,45,563	0/1:16,10:26:85.21:169,0,85	0/0:21,0:21:32.73:0,33,417	0/1:26,5:30:8.79:9,0,274	0/1:17,8:23:57.56:58,0,205	0/0:16,3:17:6.95:0,7,281	0/1:31,8:38:31.41:31,0,373	0/1:18,0:17:7.63:8,0,72	0/0:19,0:19:20.38:0,20,264	0/0:22,0:22:32.87:0,33,382	0/0:25,0:24:31.71:0,32,425	0/0:23,0:23:32.47:0,32,391	0/0:41,0:39:99:0,114,1446	0/0:26,0:24:57.18:0,57,762	0/0:24,0:22:51.10:0,51,627
chr10	29804943	.	ATT	A	2378.74	PASS	AB=0.957;AC=15;AF=0.268;AN=56;BaseQRankSum=-8.201;DP=624;FS=14.961;HRun=15;HaplotypeScore=118.5889;InbreedingCoeff=0.8819;MQ=72.32;MQ0=2;MQRankSum=2.040;QD=13.07;ReadPosRankSum=5.205;VQSLOD=1.0155;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:82:0,82,1313	0/0:12,0:12:20.28:0,20,132	0/0:29,0:19:33.30:0,33,281	0/1:21,0:10:19.59:20,0,60	0/0:24,0:25:55.31:0,55,543	0/0:23,0:23:47.81:0,48,358	0/0:20,0:20:53.58:0,54,480	0/0:30,0:30:58.84:0,59,432	1/1:7,8:16:17.73:202,18,0	0/0:26,0:26:50.35:0,50,376	0/0:19,0:19:38.04:0,38,273	0/0:17,0:18:47.33:0,47,422	0/0:32,0:32:61.54:0,62,533	0/0:21,0:21:45.49:0,45,385	1/1:1,21:23:41.83:414,42,0	0/0:22,0:22:53.89:0,54,485	1/1:4,23:31:36.71:433,37,0	1/1:5,19:25:38.75:388,39,0	1/1:8,10:18:29.82:256,30,0	1/1:4,23:29:62.11:560,62,0	1/1:3,12:18:32.29:306,32,0	0/0:12,0:12:25.18:0,25,218	0/0:15,0:15:27.25:0,27,265	0/0:23,0:23:52.89:0,53,446	0/0:21,0:21:38.43:0,38,278	0/0:23,0:23:50.51:0,51,451	0/0:24,0:25:64.76:0,65,606	0/0:2,0:2:3.90:0,4,42
chr10	29804958	.	TA	T	5521.09	PASS	AB=0.983;AC=38;AF=0.679;AN=56;BaseQRankSum=3.057;DP=638;FS=11.244;HRun=5;HaplotypeScore=112.3416;InbreedingCoeff=0.8376;MQ=74.40;MQ0=3;MQRankSum=0.680;QD=12.84;ReadPosRankSum=-1.336;VQSLOD=2.6449;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,108,1150	1/1:2,0:10:13.86:51,14,0	0/1:33,0:20:2.67:3,0,196	0/1:28,1:14:23.59:24,0,109	1/1:12,11:23:45.53:362,46,0	1/1:1,16:20:39.70:367,40,0	1/1:10,9:20:33.68:365,34,0	1/1:7,4:34:69.88:370,70,0	0/0:13,0:13:37.26:0,37,237	1/1:3,0:23:41.19:177,41,0	1/1:0,0:16:27.13:119,27,0	1/1:10,7:20:40.80:291,41,0	1/1:15,11:27:58.39:482,58,0	1/1:15,8:24:57.05:449,57,0	0/0:26,0:26:61.38:0,61,418	1/1:15,10:25:58.69:483,59,0	0/0:33,0:33:75.05:0,75,471	0/0:28,0:28:70.11:0,70,459	0/0:19,0:19:50.60:0,51,381	0/0:32,0:32:80.09:0,80,502	0/0:18,0:18:49.50:0,49,307	1/1:9,4:13:29.25:228,29,0	1/1:9,3:13:23.93:186,24,0	1/1:16,9:27:62.73:463,63,0	1/1:1,14:15:33.08:356,33,0	1/1:6,15:22:43.46:336,43,0	1/1:18,7:26:49.71:392,50,0	1/1:1,9:10:2.94:18,3,0
chr10	29805567	.	G	GAC	305.20	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=2.358;DP=724;FS=5.669;HRun=0;HaplotypeScore=141.8829;InbreedingCoeff=0.7053;MQ=59.45;MQ0=19;MQRankSum=-0.880;QD=4.84;ReadPosRankSum=-1.433;VQSLOD=2.4771;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:29,12:42:28.08:399,28,0	0/0:13,0:13:27.08:0,27,337	0/0:33,0:16:15.12:0,15,168	0/0:29,0:14:23.76:0,24,214	0/0:23,0:23:45.07:0,45,539	0/0:18,0:18:33.08:0,33,386	0/0:26,0:26:42.11:0,42,502	0/0:34,0:33:51.66:0,52,600	0/0:19,0:19:42.13:0,42,510	0/0:17,0:17:39.09:0,39,463	0/0:22,0:20:33.09:0,33,399	0/0:29,0:29:66.14:0,66,762	0/0:32,0:32:78.15:0,78,929	0/0:19,0:19:38.58:0,39,418	0/0:27,0:26:51.08:0,51,637	0/0:32,0:30:59.85:0,60,788	0/0:26,0:26:54.17:0,54,676	0/0:33,0:32:64.39:0,64,786	0/0:17,0:18:31.64:0,32,366	0/0:30,0:29:60.14:0,60,699	0/0:49,0:46:86.61:0,87,1031	0/0:26,0:26:60.17:0,60,735	0/0:26,0:26:42.13:0,42,520	0/0:24,0:23:45.12:0,45,549	0/0:21,0:22:50.99:0,51,612	0/1:21,0:20:2.23:2,0,439	0/0:26,0:24:52.71:0,53,635	0/0:8,0:8:9.01:0,9,99
chr10	29805589	.	GAC	G	2281.33	PASS	AB=0.605;AC=11;AF=0.196;AN=56;BaseQRankSum=-10.318;DP=772;FS=5.094;HRun=0;HaplotypeScore=153.5099;InbreedingCoeff=0.8471;MQ=57.25;MQ0=25;MQRankSum=0.533;QD=13.50;ReadPosRankSum=2.415;VQSLOD=3.5936;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:18.14:0,18,169	0/0:5,0:13:13.85:0,14,111	0/0:41,0:15:22.42:0,22,235	0/0:37,0:14:20.89:0,21,166	0/0:7,0:30:40.55:0,41,277	0/0:5,0:24:18.30:0,18,144	0/0:10,0:27:17.98:0,18,151	0/0:22,0:40:32.78:0,33,328	0/0:20,0:20:30.69:0,31,569	0/0:7,0:20:27.60:0,28,228	0/0:4,0:21:40.17:0,40,290	0/0:7,0:35:50.02:0,50,424	0/0:9,0:33:54:0,54,486	0/0:6,0:25:23.99:0,24,209	1/1:7,19:26:42.10:449,42,0	0/0:6,0:26:47.91:0,48,434	1/1:9,18:28:60.48:686,60,0	1/1:18,12:29:11.48:308,11,0	1/1:7,5:12:14.63:151,15,0	0/1:9,17:25:17.59:264,0,18	1/1:15,30:42:51.15:598,51,0	0/0:6,0:31:57.41:0,57,410	0/0:3,0:22:43.45:0,43,368	0/0:7,0:24:23.03:0,23,190	0/0:7,0:18:20.03:0,20,162	0/0:9,0:27:26.43:0,26,282	0/0:5,0:25:35.99:0,36,315	0/0:3,0:9:7.07:0,7,38
chr10	29806749	.	CT	C	6229.02	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-10.198;DP=558;FS=11.365;HRun=12;HaplotypeScore=64.6801;InbreedingCoeff=0.9195;MQ=71.07;MQ0=0;MQRankSum=-0.942;QD=16.14;ReadPosRankSum=2.133;VQSLOD=5.4000;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:4,2:28:8.43:0,8,237	1/1:1,6:7:14.90:111,15,0	0/0:8,0:9:11.23:0,11,93	0/0:6,0:6:2.37:0,2,53	1/1:2,25:27:68.62:524,69,0	1/1:4,24:28:62.75:488,63,0	1/1:3,13:17:40.88:308,41,0	1/1:9,21:32:25.65:416,26,0	0/0:17,1:18:18.83:0,19,366	1/1:4,21:26:58.64:432,59,0	1/1:6,12:18:2.55:202,3,0	1/1:3,15:18:44.82:348,45,0	1/1:4,12:16:32.70:255,33,0	1/1:5,12:17:32.85:255,33,0	0/0:5,0:19:34.74:0,35,230	1/1:1,30:31:74.69:577,75,0	0/0:5,0:23:48.65:0,49,270	0/0:1,0:11:22.73:0,23,114	0/0:9,0:20:34.74:0,35,203	0/0:4,0:23:49.21:0,49,286	0/0:4,0:15:14.20:0,14,71	1/1:3,10:13:24.23:179,24,0	1/1:7,22:29:53.76:417,54,0	1/1:3,19:22:50.80:395,51,0	1/1:6,17:23:38.82:302,39,0	1/1:5,19:24:50.55:380,51,0	1/1:4,23:28:54.91:501,55,0	1/1:3,7:10:17.92:139,18,0
chr10	29807159	.	TAA	T	3814.34	PASS	AB=0.593;AC=13;AF=0.232;AN=56;BaseQRankSum=12.518;DP=663;FS=9.321;HRun=11;HaplotypeScore=80.7102;InbreedingCoeff=0.8742;MQ=68.75;MQ0=1;MQRankSum=-0.114;QD=20.62;ReadPosRankSum=4.764;VQSLOD=2.3173;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,129,1912	0/0:8,0:9:20.56:0,21,286	0/0:10,0:10:8.18:0,8,118	0/0:6,0:7:11.52:0,12,135	0/0:32,0:33:92.77:0,93,1351	0/0:23,0:23:54.18:0,54,831	0/0:22,0:23:56.67:0,57,820	0/0:34,0:34:84.27:0,84,1271	1/1:0,0:25:49.99:162,50,0	0/0:19,0:19:42.12:0,42,590	0/0:18,0:18:42.14:0,42,644	0/0:23,0:23:59.66:0,60,840	0/0:23,0:24:65.71:0,66,973	0/0:31,0:32:93.25:0,93,1345	1/1:4,20:25:48.05:566,48,0	0/0:21,0:22:59.68:0,60,857	1/1:4,32:35:75.18:797,75,0	1/1:4,27:31:69.16:734,69,0	1/1:4,14:18:42.07:438,42,0	1/1:2,32:34:81.13:862,81,0	0/1:5,11:16:13.98:254,0,14	0/0:25,0:28:70.67:0,71,934	0/0:27,0:28:66.20:0,66,956	0/0:13,0:13:33.10:0,33,487	0/0:17,0:18:50.63:0,51,706	0/0:32,0:32:84.27:0,84,1254	0/0:31,0:32:89.72:0,90,1256	0/0:4,0:4:9.03:0,9,139
chr10	29807955	.	TA	T	2848.96	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=9.642;DP=588;FS=4.130;HRun=8;HaplotypeScore=59.9245;InbreedingCoeff=0.9918;MQ=67.76;MQ0=1;MQRankSum=1.563;QD=20.50;ReadPosRankSum=2.574;VQSLOD=3.8383;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:83.82:0,84,949	0/0:11,0:11:33.09:0,33,383	0/0:16,0:9:20.74:0,21,162	0/0:13,0:8:13.97:0,14,103	0/0:31,0:31:87.22:0,87,992	0/0:19,1:20:31.13:0,31,595	0/0:12,0:12:36.08:0,36,394	0/0:28,0:28:60.15:0,60,684	0/0:18,0:18:45.08:0,45,517	0/0:21,0:21:60.11:0,60,659	0/0:32,0:32:78.16:0,78,882	0/0:10,0:10:27.03:0,27,295	0/0:19,0:19:54.15:0,54,630	0/0:22,0:22:60.17:0,60,701	1/1:0,18:18:39.06:376,39,0	0/0:19,0:19:54.17:0,54,641	1/1:4,31:35:81.13:780,81,0	1/1:4,23:26:65.99:622,66,0	1/1:6,16:22:48.07:458,48,0	1/1:5,23:29:65.84:599,66,0	1/1:0,8:8:21.03:202,21,0	0/0:7,0:7:18.03:0,18,192	0/0:21,0:21:54.12:0,54,597	0/0:8,0:8:24.07:0,24,285	0/0:33,0:33:87.27:0,87,1033	0/0:31,0:31:76.17:0,76,888	0/0:25,0:26:72.20:0,72,835	0/0:23,0:23:69.14:0,69,749
chr10	29808864	.	T	TTCTGTGGGACAGCAGAACC	7501.34	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=1.308;DP=554;FS=0.000;HRun=0;HaplotypeScore=265.4458;InbreedingCoeff=0.9014;MQ=91.91;MQ0=0;MQRankSum=-8.811;QD=197.40;ReadPosRankSum=1.067;VQSLOD=4.4752;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:23,14:38:93.32:7501,93,0	0/0:13,0:13:36.09:0,36,1604	0/0:22,0:22:57.15:0,57,1924	0/0:25,0:25:65.53:0,66,2879	0/0:22,0:22:66.23:0,66,3186	0/0:18,0:18:48.16:0,48,2176	0/0:19,0:19:57.20:0,57,2732	0/0:23,0:23:66.22:0,66,2933	0/0:23,0:23:63.21:0,63,2980	0/0:21,0:21:63.22:0,63,3283	0/0:19,0:19:57.20:0,57,3039	0/0:18,0:18:51.18:0,51,2444	0/0:18,0:18:51.18:0,51,2771	0/0:12,0:12:36.12:0,36,1608	0/0:16,0:16:48.16:0,48,2406	0/0:24,0:24:72.25:0,72,3897	0/0:31,0:30:90.30:0,90,4318	0/0:13,0:13:36.12:0,36,1862	0/0:24,0:24:66.22:0,66,3200	0/0:25,0:25:69.24:0,69,3434	0/0:15,0:15:42.10:0,42,2103	0/0:13,0:13:39.13:0,39,1978	0/0:8,0:8:21.07:0,21,1055	0/0:12,0:12:33.07:0,33,1470	0/0:32,0:32:96.33:0,96,4574	0/0:26,0:26:66.23:0,66,3433	0/0:22,0:22:60.19:0,60,2747	0/0:2,0:2:6.02:0,6,330
chr10	29809342	.	T	TC	2177.62	PASS	AB=0.620;AC=14;AF=0.250;AN=56;BaseQRankSum=-7.871;DP=513;FS=9.125;HRun=9;HaplotypeScore=56.5985;InbreedingCoeff=0.8385;MQ=79.89;MQ0=0;MQRankSum=-1.850;QD=13.96;ReadPosRankSum=0.954;VQSLOD=2.8189;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,18:22:39.09:423,39,0	0/0:10,0:10:20.92:0,21,169	0/0:24,0:23:27.62:0,28,246	0/0:21,0:18:38.37:0,38,315	0/0:15,0:15:35.98:0,36,312	0/0:23,0:23:56.73:0,57,474	0/0:22,0:23:43.97:0,44,368	0/0:26,0:26:35.93:0,36,311	1/1:7,12:22:11.69:87,12,0	0/0:23,0:23:59.96:0,60,513	0/0:17,0:17:41.61:0,42,355	0/0:13,0:13:32.97:0,33,282	0/0:11,0:11:23.95:0,24,204	0/0:17,0:17:41.99:0,42,364	0/1:6,15:21:1.85:208,0,2	0/0:20,0:20:59.98:0,60,519	1/1:3,22:25:51.14:564,51,0	1/1:0,11:11:18.05:199,18,0	0/1:11,12:23:37.30:356,0,37	1/1:2,6:8:18.05:199,18,0	1/1:7,17:24:30.08:332,30,0	0/0:16,0:16:35.97:0,36,312	0/0:13,0:13:32.78:0,33,273	0/0:22,0:22:53.97:0,54,466	0/0:10,0:9:26.98:0,27,232	0/0:13,0:13:32.98:0,33,283	0/0:26,0:26:65.95:0,66,569	0/0:14,0:14:26.98:0,27,234
chr10	29809657	.	TTAA	T	2452.24	PASS	AC=32;AF=0.696;AN=46;BaseQRankSum=-4.077;DP=253;FS=2.189;HRun=0;HaplotypeScore=42.3963;InbreedingCoeff=0.6855;MQ=81.65;MQ0=0;MQRankSum=6.148;QD=14.95;ReadPosRankSum=0.045;VQSLOD=2.8093;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:4:6.02:0,6,116	1/1:3,1:4:3.01:40,3,0	./.	./.	1/1:8,1:9:9.03:119,9,0	1/1:5,10:15:18.06:242,18,0	1/1:0,3:3:3.01:40,3,0	1/1:19,12:31:36.03:399,36,0	0/0:2,0:4:8.96:0,9,96	1/1:7,2:9:6.02:81,6,0	1/1:4,4:8:9.03:121,9,0	1/1:5,5:10:9.03:121,9,0	1/1:9,3:12:9.03:121,9,0	1/1:6,6:13:21.04:263,21,0	0/0:7,0:9:11.83:0,12,130	./.	0/0:10,0:12:6.90:0,7,76	./.	0/0:12,0:15:15.01:0,15,192	0/0:5,0:7:6.02:0,6,72	./.	0/0:5,0:5:3.01:0,3,58	1/1:4,1:5:3.01:40,3,0	1/1:1,1:2:3.01:40,3,0	1/1:3,9:12:24.08:322,24,0	1/1:3,5:8:15.05:201,15,0	1/1:2,7:9:18.06:242,18,0	1/1:5,8:14:18.03:222,18,0
chr10	29809821	.	A	AGTGTGTGTGTGT	2111.84	PASS	AB=1.000;AC=16;AF=0.286;AN=56;BaseQRankSum=8.366;DP=550;FS=3.561;HRun=0;HaplotypeScore=196.4695;InbreedingCoeff=0.7619;MQ=71.81;MQ0=8;MQRankSum=-5.020;QD=10.94;ReadPosRankSum=-0.936;VQSLOD=2.6794;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:26:11.85:160,12,0	0/0:5,0:5:12.04:0,12,336	0/0:51,0:27:35.68:0,36,571	0/1:34,0:22:20.44:20,0,614	0/0:24,0:24:60.20:0,60,1524	0/0:23,0:25:45.15:0,45,1336	0/0:25,0:27:63.21:0,63,1916	0/1:37,0:37:22.88:23,0,963	0/0:15,0:15:33.11:0,33,1127	0/0:15,0:15:42.14:0,42,1241	0/0:17,0:17:39.13:0,39,1198	0/0:15,0:15:32.90:0,33,893	0/0:13,0:13:36.11:0,36,1015	0/0:14,0:15:18.12:0,18,1207	1/1:9,0:8:12.03:278,12,0	0/0:14,0:14:39.13:0,39,1197	1/1:18,0:18:13.40:273,13,0	1/1:18,0:18:33.08:1029,33,0	1/1:12,0:12:15:344,15,0	1/1:6,10:16:3.01:36,3,0	1/1:23,0:22:12.01:138,12,0	0/0:13,0:13:30.09:0,30,824	0/0:11,0:11:27.09:0,27,899	0/0:34,0:35:90.31:0,90,2818	0/0:12,0:12:33.10:0,33,864	0/0:16,0:17:51.16:0,51,1454	0/0:20,0:20:57.12:0,57,1558	0/0:13,0:13:18.06:0,18,418
chr10	29810309	.	A	AT	9656.81	PASS	AB=0.556;AC=49;AF=0.875;AN=56;BaseQRankSum=-6.893;DP=458;FS=2.765;HRun=3;HaplotypeScore=69.1391;InbreedingCoeff=0.8040;MQ=87.93;MQ0=0;MQRankSum=-3.868;QD=23.90;ReadPosRankSum=0.863;VQSLOD=4.1117;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,13:16:30.10:446,30,0	1/1:0,7:7:21.07:308,21,0	0/0:23,0:23:27.26:0,27,407	0/0:16,0:16:31.77:0,32,285	1/1:0,15:15:33.02:428,33,0	1/1:3,24:27:37.76:613,38,0	1/1:3,15:18:20.35:348,20,0	1/1:4,16:20:45.06:508,45,0	0/0:15,0:15:35.81:0,36,268	1/1:1,19:20:57.07:660,57,0	1/1:1,15:16:41.38:516,41,0	1/1:3,6:9:9.03:133,9,0	1/1:2,9:11:27.31:376,27,0	1/1:4,13:17:28.86:402,29,0	1/1:27,0:27:67.62:429,68,0	1/1:3,9:13:36.07:476,36,0	1/1:26,0:26:73.85:483,74,0	1/1:13,0:13:35.33:230,35,0	1/1:13,0:13:38.31:249,38,0	1/1:12,0:12:35.62:254,36,0	1/1:13,0:13:35.52:236,36,0	0/1:3,12:15:7.10:105,0,7	1/1:8,7:15:13.58:350,14,0	1/1:0,7:7:6.02:90,6,0	1/1:4,12:16:19.90:311,20,0	1/1:1,28:29:81.93:968,82,0	1/1:4,16:20:34.48:427,34,0	1/1:0,9:9:21.07:311,21,0
chr10	29810310	.	TG	T	2223.73	PASS	AB=0.852;AC=15;AF=0.268;AN=56;BaseQRankSum=-8.403;DP=476;FS=2.695;HRun=10;HaplotypeScore=95.0178;InbreedingCoeff=0.8361;MQ=86.96;MQ0=0;MQRankSum=-1.421;QD=15.77;ReadPosRankSum=1.605;VQSLOD=4.0960;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:29:0,29,158	0/0:7,0:7:20.36:0,20,113	0/1:19,3:23:59.40:59,0,146	0/0:15,1:16:0.91:0,1,183	0/0:15,0:15:29.12:0,29,165	0/0:27,0:27:46.60:0,47,268	0/0:20,0:20:31.95:0,32,184	0/0:20,0:20:17.42:0,17,95	1/1:2,13:15:32.99:286,33,0	0/0:18,0:19:35.04:0,35,209	0/0:17,0:17:35.07:0,35,210	0/0:11,0:11:14.65:0,15,104	0/0:12,0:12:26.26:0,26,153	0/0:18,0:18:34.95:0,35,208	1/1:4,21:25:56.98:495,57,0	0/0:13,0:13:31.95:0,32,177	1/1:4,22:26:62.97:547,63,0	1/1:4,9:13:26.99:234,27,0	1/1:3,11:14:35.98:309,36,0	1/1:4,8:12:23.97:208,24,0	1/1:3,10:13:32.98:283,33,0	0/0:17,0:17:11.74:0,12,81	0/0:17,0:17:32.32:0,32,229	0/0:9,0:9:5.81:0,6,32	0/0:18,0:18:32.29:0,32,214	0/0:28,0:28:52.43:0,52,300	0/0:24,0:24:12.02:0,12,180	0/0:10,0:10:20.32:0,20,111
chr10	29810444	.	TA	T	313.68	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=-4.430;DP=445;FS=0.000;HRun=9;HaplotypeScore=118.4783;InbreedingCoeff=0.8099;MQ=61.86;MQ0=1;MQRankSum=-0.497;QD=17.43;ReadPosRankSum=-0.826;VQSLOD=2.5781;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:45.13:0,45,519	0/0:9,0:9:24.07:0,24,277	0/0:4,0:4:6:0,6,54	0/1:3,0:2:0:0,0,0	0/0:19,0:19:48.13:0,48,546	0/0:30,0:30:79.71:0,80,868	0/0:11,0:11:27.08:0,27,312	0/0:30,0:30:75.20:0,75,848	1/1:2,13:15:45.02:408,45,0	0/0:25,0:25:69.20:0,69,788	0/0:18,0:18:49.38:0,49,549	0/0:17,0:17:48.14:0,48,554	0/0:8,0:8:21.06:0,21,242	0/0:20,0:20:48.14:0,48,554	0/0:20,0:20:57.16:0,57,649	0/0:17,0:17:42.12:0,42,485	0/0:17,1:18:48.13:0,48,544	0/0:8,0:8:21.06:0,21,242	0/0:18,0:18:45.13:0,45,519	0/0:18,0:18:54.15:0,54,607	0/0:10,0:10:24.07:0,24,277	0/0:9,0:9:24.07:0,24,277	0/0:8,0:8:21.06:0,21,242	0/0:7,0:7:21.06:0,21,242	0/0:12,0:12:27.08:0,27,312	0/0:34,0:34:90.25:0,90,1021	0/0:30,0:29:78.22:0,78,891	0/0:12,0:12:33.09:0,33,372
chr10	29810473	.	TA	T	8641.02	PASS	AB=1.000;AC=51;AF=0.911;AN=56;BaseQRankSum=-3.234;DP=418;FS=1.972;HRun=9;HaplotypeScore=107.5806;InbreedingCoeff=0.7491;MQ=66.44;MQ0=1;MQRankSum=1.665;QD=21.77;ReadPosRankSum=1.815;VQSLOD=4.7850;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,13:15:42.01:381,42,0	1/1:1,6:7:18.01:165,18,0	0/1:7,0:7:13.95:14,0,50	0/0:7,0:6:11.47:0,11,87	1/1:0,11:11:30.01:274,30,0	1/1:5,24:29:74.37:653,74,0	1/1:1,10:11:18:165,18,0	1/1:8,19:27:63.02:572,63,0	0/0:4,0:14:31.70:0,32,190	1/1:7,17:24:54.02:494,54,0	1/1:2,13:16:42.02:384,42,0	1/1:0,12:12:30.02:274,30,0	1/1:0,8:8:24.01:219,24,0	1/1:2,18:20:45.02:412,45,0	1/1:2,21:23:48.02:439,48,0	1/1:1,15:16:39.02:357,39,0	1/1:3,15:18:45.02:412,45,0	1/1:0,9:9:24.01:220,24,0	1/1:3,14:17:41.70:368,42,0	1/1:2,16:18:44.86:398,45,0	1/1:0,7:7:18.01:165,18,0	1/1:0,5:5:15.01:137,15,0	1/1:1,8:9:18.01:165,18,0	1/1:0,8:8:15.01:137,15,0	1/1:2,9:11:27.01:247,27,0	1/1:5,24:29:72.03:659,72,0	1/1:4,24:27:66.03:604,66,0	1/1:0,12:12:36.02:329,36,0
chr10	29810760	.	G	GTA	821.50	PASS	AB=1.000;AC=4;AF=0.071;AN=56;BaseQRankSum=-3.375;DP=330;FS=4.404;HRun=0;HaplotypeScore=38.7381;InbreedingCoeff=0.3939;MQ=68.58;MQ0=0;MQRankSum=-1.144;QD=24.16;ReadPosRankSum=1.067;VQSLOD=3.2556;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,21:22:54.18:910,54,0	0/0:6,0:6:15.05:0,15,193	0/1:3,0:3:15.04:15,0,32	0/1:8,0:6:1.60:2,0,66	0/0:18,0:18:39.11:0,39,486	0/0:16,0:16:42.07:0,42,495	0/0:4,0:4:9.03:0,9,115	0/0:36,0:36:90.27:0,90,1123	0/0:4,0:4:12.04:0,12,154	0/0:15,0:15:33.11:0,33,424	0/0:12,0:12:27.08:0,27,335	0/0:4,0:4:9.01:0,9,101	0/0:5,0:5:9.03:0,9,116	0/0:12,0:12:27.09:0,27,346	0/0:11,0:11:33.10:0,33,412	0/0:9,0:9:21.05:0,21,256	0/0:13,0:13:36.08:0,36,422	0/0:12,0:12:30.09:0,30,375	0/0:24,0:24:51.14:0,51,628	0/0:9,0:9:27.09:0,27,346	0/0:6,0:6:18.06:0,18,231	0/0:1,0:1:3.01:0,3,38	0/0:5,0:5:9.03:0,9,116	0/0:5,0:5:12.04:0,12,154	0/0:14,0:14:39.10:0,39,474	0/0:16,0:16:42.12:0,42,517	0/0:21,0:21:54.11:0,54,671	0/0:18,0:18:36.12:0,36,460
chr10	29812101	.	TTGGTCTGGAC	T	21869.29	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=17.240;DP=590;FS=2.281;HRun=0;HaplotypeScore=192.1375;InbreedingCoeff=0.9774;MQ=84.69;MQ0=0;MQRankSum=-16.848;QD=71.70;ReadPosRankSum=1.967;VQSLOD=4.8429;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,148,7451	1/1:2,4:6:12.04:400,12,0	0/0:32,0:32:90.31:0,90,3503	0/0:24,0:24:60.67:0,61,2635	1/1:2,21:23:54.18:1519,54,0	1/1:2,15:17:42.14:1233,42,0	1/1:1,19:20:39.13:1231,39,0	1/1:3,20:23:60.18:1399,60,0	0/0:23,0:23:63.22:0,63,3105	1/1:0,10:10:30.10:936,30,0	1/1:2,22:24:54.18:1658,54,0	1/1:1,18:19:41.60:1394,42,0	1/1:1,16:17:42.14:1359,42,0	1/1:0,8:8:18.06:600,18,0	0/0:28,0:28:78.27:0,78,4102	1/1:2,23:25:57.20:1874,57,0	0/0:35,0:35:99:0,102,4783	0/0:19,0:19:57.20:0,57,3029	0/0:22,0:22:63.22:0,63,3188	0/0:27,0:27:78.27:0,78,4088	0/0:25,0:25:75.26:0,75,3576	1/1:1,20:21:51.13:1594,51,0	1/1:0,20:20:45.02:1474,45,0	1/1:0,10:10:18.06:600,18,0	1/1:0,22:22:51.18:1674,51,0	1/1:3,19:22:57.19:1722,57,0	1/1:0,13:13:30.10:1000,30,0	1/1:0,5:5:6.02:200,6,0
chr10	29812609	.	T	TA	584.26	PASS	AB=0.989;AC=8;AF=0.143;AN=56;BaseQRankSum=13.138;DP=507;FS=3.140;HRun=10;HaplotypeScore=64.1242;InbreedingCoeff=0.3584;MQ=70.23;MQ0=0;MQRankSum=-0.004;QD=4.53;ReadPosRankSum=2.027;VQSLOD=0.5526;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:32.96:0,33,271	0/0:5,0:5:11.98:0,12,99	0/0:16,1:15:8.24:0,8,227	0/0:13,0:13:5.25:0,5,97	0/0:25,0:25:62.92:0,63,517	0/0:20,1:21:27.95:0,28,436	0/0:16,0:16:41.78:0,42,334	0/0:35,0:35:68.88:0,69,565	0/0:14,0:14:38.95:0,39,320	0/0:17,1:18:9.95:0,10,286	0/0:24,0:26:51.98:0,52,401	0/0:16,0:17:40.99:0,41,326	0/0:10,0:10:29.93:0,30,241	0/0:12,0:12:23.96:0,24,197	0/1:21,0:21:12.02:88,0,12	0/0:8,0:8:20.97:0,21,172	1/1:16,0:16:12.38:112,12,0	0/1:21,0:21:3.79:112,0,4	0/1:20,1:21:53.06:115,0,53	1/1:36,0:37:2.27:254,2,0	0/1:13,0:13:37.37:37,0,57	0/0:10,0:10:20.97:0,21,172	0/0:17,0:17:47.90:0,48,388	0/0:13,0:13:35.92:0,36,292	0/0:15,0:15:44.91:0,45,364	0/0:37,0:37:98.86:0,99,813	0/0:24,0:24:50.92:0,51,418	0/0:12,0:13:38:0,38,301
chr10	29812617	.	A	AAAC	5478.62	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-12.167;DP=510;FS=5.399;HRun=0;HaplotypeScore=68.8623;InbreedingCoeff=0.9909;MQ=72.84;MQ0=0;MQRankSum=-1.999;QD=39.70;ReadPosRankSum=2.828;VQSLOD=5.6880;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:33.08:0,33,443	0/0:6,0:6:12.03:0,12,159	0/0:20,0:18:35.13:0,35,391	0/0:17,0:17:31.34:0,31,326	0/0:22,0:22:57.19:0,57,839	0/0:22,0:22:65.79:0,66,898	0/0:17,0:17:42.11:0,42,575	0/0:31,0:31:60.18:0,60,819	0/0:13,0:13:39.13:0,39,574	0/0:19,0:19:47.72:0,48,614	0/0:21,0:21:54.14:0,54,723	0/0:15,0:15:42.12:0,42,582	0/0:10,0:10:27.09:0,27,393	0/0:10,0:10:27.08:0,27,380	1/1:4,15:19:36.12:735,36,0	0/0:7,0:7:21.07:0,21,309	1/1:2,15:17:39.13:796,39,0	1/1:2,23:26:45.15:919,45,0	1/1:7,16:24:30.23:823,30,0	1/1:7,28:36:90.30:1785,90,0	1/1:3,12:16:21.07:422,21,0	0/0:10,0:10:24.05:0,24,283	0/0:17,0:17:48.15:0,48,688	0/0:13,0:13:36.12:0,36,530	0/0:15,0:15:36.12:0,36,530	0/0:37,0:37:96.26:0,96,1333	0/0:21,0:21:45.14:0,45,643	0/0:16,0:16:45.11:0,45,590
chr10	29812807	.	TTTTTG	T	5091.64	PASS	AB=1.000;AC=37;AF=0.661;AN=56;BaseQRankSum=10.269;DP=462;FS=2.844;HRun=0;HaplotypeScore=141.6361;InbreedingCoeff=-0.0042;MQ=57.67;MQ0=1;MQRankSum=-9.044;QD=12.60;ReadPosRankSum=1.466;VQSLOD=4.2618;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:2,14:16:23.91:288,24,0	0/1:5,0:5:5.75:53,0,6	0/0:18,0:12:32.61:0,33,620	0/0:20,0:17:42.12:0,42,943	0/1:11,0:11:29.65:70,0,30	1/1:27,0:27:21.68:588,22,0	0/1:11,0:11:35.43:47,0,35	1/1:32,0:32:17.19:442,17,0	0/0:20,0:20:57.10:0,57,1334	0/1:19,0:19:24.84:149,0,25	0/1:10,0:10:43.24:156,0,43	0/1:12,0:12:14.91:105,0,15	0/1:12,0:12:1.90:123,0,2	0/1:15,0:15:2.02:104,0,2	1/1:20,0:19:21.07:262,21,0	0/1:6,0:6:24.39:33,0,24	1/1:19,0:19:21.07:262,21,0	1/1:12,0:12:9.03:112,9,0	1/1:22,0:22:38.04:411,38,0	1/1:20,0:20:33.26:340,33,0	1/1:11,0:11:3.01:30,3,0	1/1:24,0:24:2.74:300,3,0	0/1:15,0:15:0.57:154,0,1	0/1:10,0:10:28.57:99,0,29	1/1:19,0:19:13.63:275,14,0	1/1:19,0:19:15.39:332,15,0	0/1:23,0:23:66.71:215,0,67	0/1:14,0:14:62.88:144,0,63
chr10	29812809	.	TTTGTTTTTG	T	6491.99	PASS	AB=1.000;AC=30;AF=0.536;AN=56;BaseQRankSum=6.779;DP=487;FS=3.490;HRun=0;HaplotypeScore=183.9545;InbreedingCoeff=-0.3087;MQ=56.12;MQ0=1;MQRankSum=-4.352;QD=15.68;ReadPosRankSum=0.123;VQSLOD=4.0006;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:22.42:0,22,216	0/1:5,0:5:20.72:37,0,21	0/0:17,0:12:32.85:0,33,1003	0/0:18,0:15:42.14:0,42,1564	0/1:15,0:15:61.95:112,0,62	0/1:28,0:28:41.07:326,0,41	0/1:11,0:11:85.76:86,0,107	0/1:34,0:34:14.78:475,0,15	0/0:21,0:21:60.17:0,60,2290	0/1:20,0:20:93.90:180,0,94	0/1:11,0:11:80.23:80,0,98	0/1:17,0:17:77.02:211,0,77	0/1:14,0:14:89.55:93,0,90	0/1:16,0:16:78:78,0,116	1/1:4,15:19:21.07:622,21,0	0/1:7,0:7:21.18:21,0,79	1/1:0,18:18:24.03:641,24,0	1/1:2,11:13:9.03:267,9,0	1/1:2,20:22:62.84:1138,63,0	1/1:2,17:19:53.89:1003,54,0	1/1:0,12:12:5.98:101,6,0	0/1:24,0:24:62.85:137,0,63	0/1:17,0:17:47.55:48,0,89	0/1:13,0:13:53.26:112,0,53	0/1:20,0:20:67.72:143,0,68	0/1:20,0:20:14.94:365,0,15	0/1:25,0:25:99:122,0,240	0/1:14,0:14:94.44:94,0,155
chr10	29812810	.	TTGTTTTTG	T	8340.06	PASS	AB=0.975;AC=37;AF=0.661;AN=56;BaseQRankSum=7.003;DP=489;FS=6.862;HRun=0;HaplotypeScore=170.9477;InbreedingCoeff=0.1003;MQ=56.21;MQ0=1;MQRankSum=-6.692;QD=20.05;ReadPosRankSum=-2.231;VQSLOD=3.2253;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:15.24:0,15,128	0/1:5,0:5:4.56:68,0,5	0/0:17,0:12:32.75:0,33,917	0/0:18,0:15:42.14:0,42,1414	1/1:16,0:16:0.03:303,0,0	1/1:26,1:27:32.63:646,33,0	0/1:10,1:11:27.83:130,0,28	1/1:35,0:35:55.10:763,55,0	0/0:21,0:21:60.16:0,60,2071	0/1:20,0:20:7.31:257,0,7	0/1:12,0:12:37.32:154,0,37	0/1:17,0:17:14.77:358,0,15	0/1:14,0:14:15.59:191,0,16	0/1:15,1:16:6.58:185,0,7	1/1:18,0:17:21.07:469,21,0	0/1:7,0:7:19.09:61,0,19	1/1:18,0:18:24.03:488,24,0	1/1:13,0:13:9.03:201,9,0	1/1:21,0:21:62.65:904,63,0	1/1:19,0:19:53.78:778,54,0	1/1:12,0:12:5.98:80,6,0	1/1:24,0:24:9.29:380,9,0	1/1:17,0:18:7.36:195,7,0	0/1:11,2:13:12.11:203,0,12	1/1:20,0:20:28.36:374,28,0	1/1:21,1:22:30.29:678,30,0	0/1:24,0:24:89.98:321,0,90	0/1:14,0:14:70.94:153,0,71
chr10	29812811	.	TG	T	6181.60	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=6.053;DP=483;FS=5.581;HRun=1;HaplotypeScore=121.6477;InbreedingCoeff=0.8048;MQ=55.29;MQ0=1;MQRankSum=-6.211;QD=14.41;ReadPosRankSum=-2.830;VQSLOD=3.3817;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:16:9.80:114,10,0	1/1:1,1:5:6.44:45,6,0	0/0:16,0:11:32.30:0,32,330	0/0:18,0:15:41.93:0,42,462	1/1:13,3:17:32.21:304,32,0	1/1:10,15:27:63.98:599,64,0	1/1:9,2:11:18.71:186,19,0	1/1:7,8:34:68.53:522,69,0	0/0:20,0:20:60.12:0,60,690	1/1:15,5:20:44.27:354,44,0	1/1:4,4:12:10.94:126,11,0	1/1:15,2:18:44.69:327,45,0	1/1:11,3:14:29.16:244,29,0	1/1:13,2:16:36.56:254,37,0	1/1:15,0:14:20.34:115,20,0	1/1:5,2:7:12.28:108,12,0	1/1:18,0:18:20.36:115,20,0	1/1:11,0:11:8.77:50,9,0	1/1:21,0:21:40.54:231,41,0	1/1:19,0:19:37.54:214,38,0	1/1:12,0:12:2.96:19,3,0	1/1:13,9:25:53:380,53,0	1/1:10,6:17:36.22:274,36,0	1/1:9,3:13:17.99:174,18,0	1/1:9,9:20:44.41:395,44,0	1/1:15,4:23:63.16:526,63,0	1/1:18,6:24:47.94:408,48,0	1/1:6,3:14:3.26:100,3,0
chr10	29812813	.	TTTTTG	T	5467.45	PASS	AB=0.891;AC=38;AF=0.679;AN=56;BaseQRankSum=10.576;DP=479;FS=19.808;HRun=0;HaplotypeScore=153.4154;InbreedingCoeff=0.0008;MQ=56.28;MQ0=1;MQRankSum=-8.806;QD=12.83;ReadPosRankSum=2.365;VQSLOD=3.0100;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:17,0:17:39.01:39,0,83	0/1:4,1:5:5.79:52,0,6	0/0:17,0:12:30.06:0,30,656	0/0:18,0:15:37.01:0,37,967	0/1:15,2:17:13.07:198,0,13	1/1:16,11:27:27.17:629,27,0	0/1:10,0:10:28.66:95,0,29	1/1:27,7:34:23.60:487,24,0	0/0:18,0:18:54.18:0,54,1488	0/1:15,2:17:30.27:126,0,30	0/1:9,3:12:45.03:154,0,45	0/1:15,1:16:0.88:210,0,1	1/1:10,3:13:3.02:174,3,0	0/1:16,1:17:0.80:125,0,1	1/1:15,0:14:21.06:255,21,0	0/1:6,1:7:22.07:56,0,22	1/1:18,0:18:21.06:255,21,0	1/1:11,0:11:9.03:109,9,0	1/1:21,0:21:23.44:353,23,0	1/1:19,0:19:29.95:321,30,0	1/1:12,0:12:3:29,3,0	1/1:17,8:25:0.31:296,0,0	1/1:12,5:17:6.55:203,7,0	0/1:11,3:14:25.45:121,0,25	1/1:13,8:21:18.14:305,18,0	1/1:19,4:23:31.22:461,31,0	0/1:19,4:24:60.97:273,0,61	0/1:11,3:14:63.51:140,0,64
chr10	29812814	.	TTTTG	T	5027.16	PASS	AB=0.971;AC=36;AF=0.643;AN=56;BaseQRankSum=10.674;DP=473;FS=17.587;HRun=0;HaplotypeScore=145.2484;InbreedingCoeff=0.0437;MQ=56.23;MQ0=1;MQRankSum=-6.629;QD=12.47;ReadPosRankSum=1.454;VQSLOD=3.5945;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:19.72:0,20,151	0/1:5,0:5:6.79:48,0,7	0/0:17,0:12:30.08:0,30,587	0/0:18,0:15:39.13:0,39,899	0/1:16,1:17:20.29:168,0,20	1/1:25,2:27:21.52:553,22,0	0/1:8,1:9:32.75:90,0,33	1/1:34,0:34:25.92:500,26,0	0/0:18,0:18:54.17:0,54,1313	0/1:13,2:15:36.49:121,0,36	0/1:11,1:12:46.02:145,0,46	0/1:16,0:16:9.19:197,0,9	1/1:13,0:13:3.55:169,4,0	0/1:17,0:17:12.71:89,0,13	1/1:15,0:14:21.05:214,21,0	0/1:7,0:7:23.45:54,0,23	1/1:18,0:18:21.05:214,21,0	1/1:11,0:11:9.02:92,9,0	1/1:21,0:21:26.90:304,27,0	1/1:19,0:19:35.24:294,35,0	1/1:12,0:12:2.99:23,3,0	0/1:25,0:25:5.14:284,0,5	1/1:17,0:17:6.65:208,7,0	0/1:14,0:14:31.69:116,0,32	1/1:20,1:21:20.35:310,20,0	1/1:20,0:20:33.82:444,34,0	0/1:24,0:24:78.96:259,0,79	0/1:14,0:14:69.50:130,0,69
chr10	29812817	.	TG	T	3996.18	PASS	AB=0.982;AC=38;AF=0.679;AN=56;BaseQRankSum=9.444;DP=473;FS=1.377;HRun=1;HaplotypeScore=128.2757;InbreedingCoeff=0.1586;MQ=57.49;MQ0=1;MQRankSum=-6.995;QD=9.94;ReadPosRankSum=1.746;VQSLOD=1.5805;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:31.88:0,32,220	0/1:5,0:5:14.71:29,0,15	0/0:19,0:14:32.13:0,32,419	0/0:16,0:14:39:0,39,486	1/1:18,0:18:18.40:252,18,0	1/1:25,1:26:9.60:371,10,0	0/1:10,0:10:12.24:74,0,12	1/1:32,1:33:32.01:385,32,0	0/0:19,0:19:57.16:0,57,761	0/1:14,0:14:70.68:116,0,71	0/1:12,0:12:39.36:87,0,39	1/1:14,0:15:30.80:206,31,0	1/1:15,0:15:16.02:237,16,0	1/1:15,0:15:14.13:116,14,0	1/1:15,0:14:19.21:82,19,0	0/1:8,1:9:9.15:100,0,9	1/1:18,0:18:19.03:82,19,0	1/1:11,0:11:8.23:35,8,0	1/1:21,0:21:37.31:184,37,0	1/1:19,0:19:38.27:188,38,0	1/1:12,0:12:2.50:10,2,0	0/1:20,1:21:18.87:203,0,19	0/1:17,0:17:10.98:212,0,11	0/1:14,0:14:22.75:113,0,23	1/1:22,0:22:8.34:303,8,0	1/1:21,0:21:28.09:308,28,0	0/1:24,1:25:11.70:237,0,12	0/1:14,0:14:59.21:66,0,59
chr10	29812820	.	TTTTG	T	526.05	PASS	AB=0.988;AC=18;AF=0.321;AN=56;BaseQRankSum=12.235;DP=461;FS=22.188;HRun=0;HaplotypeScore=158.5699;InbreedingCoeff=-0.1736;MQ=57.08;MQ0=1;MQRankSum=-10.500;QD=1.95;ReadPosRankSum=10.746;VQSLOD=0.1721;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:16:29.42:0,29,243	0/1:4,0:4:0.30:0,0,2	0/0:17,0:12:36.10:0,36,651	0/0:16,0:14:39.07:0,39,837	0/0:18,0:18:13.29:0,13,205	0/1:21,1:22:65.91:141,0,66	0/0:11,0:11:18.93:0,19,128	0/1:32,1:33:99:105,0,222	0/0:18,0:18:54.18:0,54,1315	0/1:12,0:12:24.25:24,0,92	0/1:14,0:14:47.88:48,0,93	0/1:16,0:16:13.27:13,0,112	0/1:14,0:14:17.81:18,0,131	0/0:12,0:12:2.33:0,2,47	1/1:15,0:14:8.72:20,9,0	0/1:9,0:9:11.96:12,0,52	0/1:20,0:20:3.13:3,0,56	0/0:13,0:13:0.11:0,0,65	0/0:21,0:21:7.42:0,7,225	0/0:20,0:20:9.82:0,10,193	0/0:13,0:13:8.62:0,9,103	0/1:18,1:19:25.34:25,0,145	0/0:15,0:15:6.70:0,7,137	0/1:14,0:14:16.63:17,0,160	0/1:21,0:21:47.53:48,0,186	0/1:20,0:20:62.19:62,0,124	0/1:23,1:24:77.66:78,0,100	1/1:13,0:13:10.46:69,10,0
chr10	29813707	.	C	CAA	6141.07	PASS	AB=1.000;AC=49;AF=0.875;AN=56;BaseQRankSum=1.422;DP=521;FS=2.262;HRun=16;HaplotypeScore=129.7480;InbreedingCoeff=0.6931;MQ=55.95;MQ0=1;MQRankSum=-3.055;QD=12.96;ReadPosRankSum=-4.623;VQSLOD=2.1257;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:20:49.02:0,49,335	1/1:3,2:7:12.23:94,12,0	0/0:14,0:5:3.65:0,4,40	0/1:10,0:5:7.19:7,0,10	1/1:28,2:31:47.62:428,48,0	1/1:17,2:21:52.56:469,53,0	1/1:7,1:9:13.73:169,14,0	1/1:31,0:30:21.39:154,21,0	0/0:13,0:13:18.36:0,18,132	1/1:25,3:31:56.21:483,56,0	1/1:29,2:33:54.42:486,54,0	1/1:18,0:19:25.44:217,25,0	1/1:20,0:21:41.98:368,42,0	1/1:17,0:16:21.53:204,22,0	1/1:16,0:16:18.99:149,19,0	1/1:14,1:15:26.66:191,27,0	1/1:14,0:13:9.31:112,9,0	1/1:12,0:10:7.67:102,8,0	1/1:9,0:14:4.46:105,4,0	1/1:32,0:34:51.98:432,52,0	1/1:3,0:3:8.59:44,9,0	1/1:11,0:14:14.70:131,15,0	1/1:26,1:28:57.20:458,57,0	1/1:12,0:12:8.03:75,8,0	1/1:14,2:18:26.35:241,26,0	1/1:18,1:19:29.52:231,30,0	1/1:26,1:31:65.51:629,66,0	1/1:9,0:10:17.98:162,18,0
chr10	29813719	.	A	AAAG	2235.80	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=3.178;DP=535;FS=1.256;HRun=0;HaplotypeScore=120.5706;InbreedingCoeff=-0.0989;MQ=63.26;MQ0=3;MQRankSum=-1.556;QD=5.65;ReadPosRankSum=4.455;VQSLOD=2.5530;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:62.22:0,62,630	0/1:7,0:7:11.74:12,0,68	0/0:21,0:10:7.95:0,8,93	0/0:21,0:13:3.44:0,3,48	0/0:34,0:34:17.25:0,17,324	0/1:19,0:19:30.17:30,0,99	0/1:10,0:10:19.17:19,0,108	0/0:27,0:26:31.30:0,31,288	0/0:15,0:15:41.97:0,42,445	0/1:35,0:34:13.48:13,0,372	0/1:35,0:35:17.16:17,0,237	0/1:15,0:15:5.37:5,0,91	0/1:21,0:21:57.79:58,0,147	0/1:18,0:17:26.57:27,0,133	1/1:10,1:14:29.56:291,30,0	0/1:14,0:14:19.23:19,0,81	1/1:16,3:19:34.75:327,35,0	1/1:7,1:8:5.08:150,5,0	1/1:15,1:14:32.02:326,32,0	1/1:19,7:29:50.67:682,51,0	1/1:5,1:6:14.88:120,15,0	0/1:10,0:10:31.07:64,0,31	0/1:30,0:29:61:61,0,146	1/1:10,0:10:8.12:49,8,0	0/1:15,0:15:39.14:39,0,58	0/1:18,0:18:25.26:25,0,110	0/1:33,0:32:71.43:71,0,252	0/1:10,0:10:8.86:9,0,93
chr10	29813746	.	G	GA	7236.01	PASS	AB=0.609;AC=44;AF=0.786;AN=56;BaseQRankSum=-2.914;DP=470;FS=14.289;HRun=9;HaplotypeScore=74.1262;InbreedingCoeff=0.5775;MQ=75.25;MQ0=1;MQRankSum=-4.383;QD=18.89;ReadPosRankSum=1.682;VQSLOD=4.1404;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:62.94:0,63,543	0/1:2,2:4:3.63:58,0,4	0/0:19,0:19:35.06:0,35,267	0/0:26,0:21:33.19:0,33,321	1/1:4,22:26:50.97:545,51,0	1/1:2,16:18:48.09:517,48,0	1/1:4,9:13:4.01:263,4,0	1/1:3,18:22:32.61:549,33,0	0/0:17,0:17:47.93:0,48,406	1/1:4,22:25:69.05:727,69,0	1/1:5,23:28:17:618,17,0	1/1:1,11:12:21.06:232,21,0	1/1:3,18:21:40.35:434,40,0	1/1:1,10:11:4.50:274,4,0	1/1:1,0:19:34.22:176,34,0	1/1:0,15:15:39.11:431,39,0	1/1:3,0:19:39.77:199,40,0	1/1:1,0:10:9.16:73,9,0	1/1:2,1:11:25.73:147,26,0	1/1:10,0:25:40.35:235,40,0	1/1:1,1:12:17.34:110,17,0	1/1:3,7:10:24.02:252,24,0	1/1:9,6:15:21.05:224,21,0	0/1:3,4:7:17.02:58,0,17	1/1:5,4:9:17.68:150,18,0	0/1:4,12:16:13.14:292,0,13	1/1:9,15:24:42.11:465,42,0	0/1:2,7:9:1.99:208,0,2
chr10	29815866	.	G	GCACACACA	7524.86	PASS	AB=1.000;AC=46;AF=0.885;AN=52;BaseQRankSum=-1.989;DP=450;FS=16.729;HRun=0;HaplotypeScore=139.7103;InbreedingCoeff=0.3741;MQ=59.06;MQ0=3;MQRankSum=-3.936;QD=18.86;ReadPosRankSum=1.456;VQSLOD=3.3815;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:15:6.02:140,6,0	1/1:8,0:8:3.01:70,3,0	0/1:25,0:20:61.55:62,0,552	0/0:11,0:9:14.72:0,15,318	1/1:28,0:28:3:96,3,0	1/1:22,0:22:18.06:434,18,0	1/1:14,0:14:6.02:168,6,0	1/1:24,0:23:24.07:513,24,0	0/0:19,0:19:45.06:0,45,888	1/1:18,0:18:27.08:634,27,0	1/1:19,0:18:9.03:288,9,0	1/1:13,0:13:21.07:577,21,0	1/1:15,0:15:19.79:431,20,0	1/1:9,0:9:6.49:143,6,0	1/1:14,0:13:5.90:120,6,0	1/1:19,0:19:20.98:406,21,0	1/1:2,0:6:3.48:68,3,0	0/1:8,0:7:1.03:99,0,1	1/1:9,0:9:9.03:234,9,0	1/1:24,0:21:3.01:68,3,0	./.	1/1:19,0:19:12.04:381,12,0	1/1:15,0:15:3.01:94,3,0	./.	1/1:27,0:27:21.06:605,21,0	1/1:15,0:14:23.97:559,24,0	1/1:20,0:20:28.90:595,29,0	1/1:12,0:12:27.09:743,27,0
chr10	29815907	.	GAGAGAGAGAGACAGAGAC	G	2514.85	PASS	AB=1.000;AC=32;AF=0.640;AN=50;BaseQRankSum=-2.747;DP=353;FS=7.029;HRun=0;HaplotypeScore=137.8383;InbreedingCoeff=0.1954;MQ=44.51;MQ0=15;MQRankSum=-1.387;QD=9.25;ReadPosRankSum=-0.579;VQSLOD=1.8440;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:10,0:9:3.01:37,3,0	1/1:3,3:6:3.01:144,3,0	0/0:6,0:2:4.56:0,5,36	0/0:9,0:4:5.10:0,5,40	0/1:27,0:25:0:0,0,0	1/1:18,0:18:12.04:193,12,0	1/1:9,0:9:6.02:89,6,0	1/1:9,0:6:3.44:21,3,0	0/0:19,0:19:2.81:0,3,1155	1/1:14,1:14:25.29:571,25,0	./.	1/1:10,0:10:8.96:104,9,0	1/1:13,1:14:35.85:560,36,0	1/1:7,0:7:0.47:1,0,0	0/0:7,0:6:0.47:0,0,1	0/1:12,0:12:4.13:87,0,4	0/1:7,0:6:76.88:77,0,77	0/0:7,0:6:1.03:0,1,36	0/1:13,0:9:8.17:8,0,62	0/1:24,0:22:41.34:41,0,75	./.	./.	0/1:21,0:20:0:0,0,0	1/1:12,0:11:2.93:50,3,0	0/1:18,0:18:0:0,0,0	1/1:13,0:11:10.95:256,11,0	1/1:18,1:18:15.45:346,15,0	0/1:8,0:8:24:60,0,24
chr10	29815911	.	GAGAGAGACAGAGAC	G	3190.48	PASS	AB=0.930;AC=36;AF=0.750;AN=48;BaseQRankSum=-2.793;DP=341;FS=7.606;HRun=0;HaplotypeScore=119.6142;InbreedingCoeff=0.1805;MQ=47.90;MQ0=14;MQRankSum=-1.100;QD=12.09;ReadPosRankSum=-0.576;VQSLOD=1.8425;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:9,0:8:3.01:37,3,0	1/1:6,0:6:3.01:105,3,0	0/0:10,0:2:5.91:0,6,48	0/0:12,0:9:0.98:0,1,44	0/1:7,18:23:0:0,0,0	1/1:18,0:18:15.05:258,15,0	1/1:10,0:10:9.03:138,9,0	1/1:6,0:3:5.98:74,6,0	0/1:17,0:17:12.59:13,0,831	1/1:6,11:16:31.27:595,31,0	./.	1/1:8,0:8:11.97:154,12,0	1/1:13,1:14:35.98:580,36,0	0/1:6,0:6:0:0,0,0	0/0:6,0:5:0.47:0,0,1	1/1:11,0:11:9.03:220,9,0	0/1:8,0:7:12:129,0,12	1/1:7,0:6:4.77:46,5,0	0/1:10,0:7:13.08:40,0,13	0/1:23,0:21:12.11:68,0,12	./.	./.	1/1:19,0:18:0.47:1,0,0	1/1:13,0:12:2.92:50,3,0	./.	1/1:13,0:11:23.99:390,24,0	1/1:17,0:16:15.49:351,15,0	1/1:7,0:7:3.51:65,4,0
chr10	29815913	.	GAGAGACAGAGAC	G	3439.78	PASS	AB=1.000;AC=40;AF=0.833;AN=48;BaseQRankSum=-1.723;DP=339;FS=4.091;HRun=0;HaplotypeScore=115.8325;InbreedingCoeff=0.2573;MQ=52.24;MQ0=14;MQRankSum=-2.162;QD=12.51;ReadPosRankSum=0.589;VQSLOD=2.0667;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:9,0:8:3.01:37,3,0	1/1:6,0:6:3.01:87,3,0	0/0:12,0:3:8.71:0,9,61	0/1:17,0:12:10.28:10,0,37	0/1:25,0:23:0:0,0,0	1/1:16,2:18:15.05:267,15,0	1/1:9,0:9:9.03:138,9,0	1/1:5,0:2:5.98:74,6,0	0/1:18,0:18:24.43:24,0,727	1/1:16,0:15:31.28:535,31,0	./.	1/1:8,1:9:14.98:203,15,0	1/1:14,0:14:35.98:562,36,0	1/1:5,0:5:0.89:2,1,0	0/0:5,0:4:0:0,0,0	1/1:11,0:11:9.03:229,9,0	0/1:7,0:6:1.11:151,0,1	1/1:7,0:6:8.04:71,8,0	1/1:9,0:6:6.05:93,6,0	1/1:22,0:20:5.58:99,6,0	./.	./.	1/1:19,0:18:0.47:1,0,0	1/1:12,0:11:2.71:50,3,0	./.	1/1:11,1:10:25.48:396,25,0	1/1:18,0:17:15.26:335,15,0	1/1:7,0:7:8.68:74,9,0
chr10	29815915	.	GAGACAGAGAC	G	3660.39	PASS	AB=1.000;AC=40;AF=0.870;AN=46;BaseQRankSum=-1.224;DP=333;FS=4.379;HRun=0;HaplotypeScore=107.3960;InbreedingCoeff=0.3007;MQ=52.67;MQ0=14;MQRankSum=-2.319;QD=14.88;ReadPosRankSum=0.852;VQSLOD=1.8853;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:9,0:9:3.01:37,3,0	1/1:3,1:4:3.01:72,3,0	0/0:13,0:3:8.78:0,9,67	0/1:16,0:12:15.26:15,0,34	./.	1/1:15,2:17:15.05:295,15,0	1/1:10,0:10:12.04:187,12,0	1/1:6,0:2:5.98:74,6,0	0/1:18,0:18:39.48:39,0,672	1/1:15,1:14:30.04:496,30,0	./.	1/1:9,0:9:14.98:203,15,0	1/1:13,1:14:35.98:527,36,0	1/1:5,0:5:0.47:1,0,0	0/0:5,0:4:0:0,0,0	1/1:11,0:11:9.03:238,9,0	1/1:7,0:7:18.88:241,19,0	1/1:7,0:6:9.03:131,9,0	1/1:8,0:5:13.01:115,13,0	1/1:22,0:20:9.88:116,10,0	./.	./.	1/1:17,0:16:0.47:1,0,0	1/1:12,0:11:2.71:50,3,0	./.	1/1:12,0:10:26.07:387,26,0	1/1:5,13:17:15.34:353,15,0	1/1:7,0:7:10.14:84,10,0
chr10	29815917	.	GACAGAGAC	G	3713.61	PASS	AB=0.883;AC=42;AF=0.875;AN=48;BaseQRankSum=-1.234;DP=330;FS=8.162;HRun=0;HaplotypeScore=103.5984;InbreedingCoeff=0.2885;MQ=54.77;MQ0=14;MQRankSum=-2.887;QD=13.75;ReadPosRankSum=1.081;VQSLOD=1.8024;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:0,8:8:3.01:37,3,0	1/1:4,0:4:3.01:59,3,0	0/0:14,0:4:10.82:0,11,73	0/1:21,0:14:32.40:32,0,44	0/1:22,0:20:0:0,0,0	1/1:16,1:17:15.05:263,15,0	1/1:9,0:9:12.04:187,12,0	1/1:7,0:3:8.99:115,9,0	0/1:18,0:18:40.03:40,0,564	1/1:16,0:14:30.04:446,30,0	./.	1/1:8,0:8:14.98:203,15,0	1/1:13,1:14:35.98:512,36,0	1/1:5,0:5:0.47:1,0,0	1/1:6,0:5:2.97:49,3,0	1/1:0,9:11:9.03:211,9,0	1/1:7,0:7:21:276,21,0	1/1:7,0:6:9.50:132,10,0	1/1:6,0:3:9.03:123,9,0	1/1:20,0:19:9.97:136,10,0	./.	./.	0/1:2,15:16:0:0,0,0	1/1:10,1:10:2.95:49,3,0	./.	1/1:11,0:9:25.90:386,26,0	1/1:16,2:17:15.35:343,15,0	1/1:6,0:6:10.58:113,11,0
chr10	29816001	.	AACACATACACACACACACACACACACACACACACACAC	A	1872.98	PASS	AB=0.991;AC=21;AF=0.375;AN=56;BaseQRankSum=0.495;DP=417;FS=62.192;HRun=0;HaplotypeScore=325.5636;InbreedingCoeff=0.0741;MQ=71.40;MQ0=27;MQRankSum=-2.932;QD=8.25;ReadPosRankSum=-3.960;VQSLOD=-0.4174;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:15:18.06:0,18,1701	0/0:7,0:7:15.05:0,15,1289	0/0:35,0:16:28.29:0,28,600	0/0:51,0:29:61.22:0,61,1291	0/0:11,0:11:18.06:0,18,1717	0/1:17,0:16:99:122,0,462	0/1:12,0:10:24.43:24,0,349	0/1:24,0:24:99:388,0,474	0/0:10,0:10:18.03:0,18,431	0/1:14,0:14:10.32:10,0,3127	0/0:7,0:7:5.56:0,6,458	0/1:16,0:17:72.20:72,0,1547	0/0:12,0:12:24.08:0,24,1486	0/0:4,0:2:3.01:0,3,219	1/1:10,0:10:20.97:196,21,0	0/1:11,0:11:5.93:6,0,2060	1/1:14,0:14:20.66:135,21,0	0/1:9,0:9:9.34:112,0,9	1/1:4,11:15:35.33:306,35,0	1/1:0,14:14:6.02:367,6,0	1/1:15,0:13:7.62:122,8,0	0/0:10,0:9:5.07:0,5,951	0/0:7,0:6:2.10:0,2,181	0/0:18,0:17:5.98:0,6,1230	0/1:8,0:7:9.91:10,0,1102	0/1:13,0:13:73.82:74,0,1623	0/1:20,0:21:66.77:67,0,1957	0/1:13,0:13:37.80:38,0,988
chr10	29816436	.	TCA	T	14464.05	PASS	AB=0.538;AC=47;AF=0.839;AN=56;BaseQRankSum=2.570;DP=582;FS=3.730;HRun=0;HaplotypeScore=85.5192;InbreedingCoeff=0.8148;MQ=71.60;MQ0=3;MQRankSum=-3.779;QD=28.09;ReadPosRankSum=5.033;VQSLOD=6.2221;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:60.13:0,60,1045	1/1:0,5:6:14.72:202,15,0	0/0:19,0:13:35.41:0,35,416	0/0:12,0:11:11.53:0,12,191	1/1:0,38:40:99:1532,117,0	1/1:0,14:15:26.76:396,27,0	1/1:0,11:13:33.10:491,33,0	1/1:0,25:25:75.01:917,75,0	0/0:15,0:15:45.10:0,45,731	1/1:0,34:35:99:1432,105,0	1/1:0,26:26:71.80:995,72,0	1/1:0,20:20:48.16:757,48,0	1/1:1,14:17:8.47:418,8,0	1/1:0,19:20:38.72:571,39,0	1/1:6,0:22:17.97:199,18,0	1/1:0,25:25:48.16:771,48,0	1/1:1,2:22:50.94:275,51,0	1/1:1,1:27:43.28:206,43,0	1/1:1,1:27:35.12:343,35,0	1/1:1,0:31:3.29:211,3,0	0/1:1,0:7:10.57:14,0,11	1/1:2,19:22:53.76:776,54,0	1/1:0,14:16:31.81:398,32,0	1/1:1,11:12:27.09:414,27,0	1/1:0,26:27:66.22:1042,66,0	1/1:0,21:21:63.06:825,63,0	1/1:2,20:21:46.40:711,46,0	1/1:0,12:14:38.49:567,38,0
chr10	29816957	.	G	GGAGA	19177.79	PASS	AB=1.000;AC=51;AF=0.911;AN=56;BaseQRankSum=4.218;DP=539;FS=5.982;HRun=0;HaplotypeScore=170.8458;InbreedingCoeff=0.7987;MQ=53.27;MQ0=10;MQRankSum=-7.090;QD=42.24;ReadPosRankSum=2.025;VQSLOD=5.1873;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,14:23:39.12:964,39,0	1/1:7,4:11:27.05:509,27,0	0/0:63,0:30:20.49:0,20,766	0/1:68,0:25:5:5,0,418	1/1:3,18:21:26.99:678,27,0	1/1:8,7:15:31.50:620,32,0	1/1:5,9:14:27.08:698,27,0	1/1:7,13:18:51.05:1109,51,0	0/0:20,0:20:42.51:0,43,712	1/1:3,16:18:51.14:1241,51,0	1/1:3,7:10:15.04:380,15,0	1/1:5,8:13:39.04:869,39,0	1/1:8,9:18:41.83:871,42,0	1/1:3,5:8:21:434,21,0	1/1:11,18:28:72.15:1588,72,0	1/1:7,13:20:42.05:1029,42,0	1/1:4,12:16:29.58:716,30,0	1/1:2,11:12:33.09:807,33,0	1/1:8,5:13:24.05:520,24,0	1/1:4,11:15:39.05:930,39,0	1/1:9,6:12:13.80:327,14,0	1/1:4,5:9:15.05:375,15,0	1/1:2,7:9:21.07:550,21,0	1/1:8,5:11:14.73:206,15,0	1/1:0,5:5:15.05:387,15,0	1/1:4,17:21:57.15:1439,57,0	1/1:11,16:27:72.09:1576,72,0	1/1:1,4:5:15.05:351,15,0
chr10	29816967	.	A	AAG	9267.46	PASS	AB=0.646;AC=48;AF=0.857;AN=56;BaseQRankSum=5.907;DP=551;FS=26.178;HRun=0;HaplotypeScore=198.3323;InbreedingCoeff=0.6485;MQ=42.72;MQ0=20;MQRankSum=-5.116;QD=24.45;ReadPosRankSum=1.117;VQSLOD=3.8602;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:12,9:20:24.08:384,24,0	1/1:2,7:9:21.07:329,21,0	0/0:77,0:26:30.78:0,31,427	0/0:73,0:20:23.89:0,24,271	0/1:8,12:19:29.95:30,0,31	1/1:5,12:16:42.07:601,42,0	1/1:6,6:11:24.03:343,24,0	1/1:14,10:21:33.07:478,33,0	0/0:21,1:22:33.42:0,33,488	1/1:8,11:17:38.96:587,39,0	0/1:7,7:14:29.83:30,0,31	1/1:3,7:11:24.08:352,24,0	1/1:3,11:13:38.80:579,39,0	1/1:3,5:8:14.41:192,14,0	1/1:7,19:26:63.01:896,63,0	1/1:6,11:18:42.14:667,42,0	1/1:8,8:15:19.59:389,20,0	1/1:6,6:11:21.07:321,21,0	1/1:11,3:15:27.05:384,27,0	1/1:8,8:15:17.99:225,18,0	1/1:7,7:11:6:73,6,0	1/1:3,7:10:15.02:159,15,0	1/1:4,6:10:14.69:163,15,0	1/1:4,6:9:9.03:122,9,0	1/1:4,5:8:15.05:222,15,0	1/1:5,15:19:54.10:786,54,0	1/1:11,14:24:18.61:708,19,0	1/1:2,4:5:15.05:246,15,0
chr10	29816976	.	AGAGGG	A	630.70	PASS	AB=0.988;AC=21;AF=0.375;AN=56;BaseQRankSum=-0.302;DP=554;FS=4.850;HRun=0;HaplotypeScore=232.9544;InbreedingCoeff=-0.4451;MQ=37.46;MQ0=25;MQRankSum=-1.614;QD=2.02;ReadPosRankSum=-5.832;VQSLOD=0.7551;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:22:40.10:94,0,40	0/1:11,0:9:13.21:13,0,78	0/0:60,0:19:41.64:0,42,861	0/0:66,0:16:26.62:0,27,534	0/0:20,0:19:5.89:0,6,93	0/1:20,0:19:25.13:25,0,117	0/1:12,0:10:25.78:26,0,70	0/1:24,0:21:20.16:20,0,327	0/0:22,0:21:53.34:0,53,1342	0/1:17,0:15:84.81:85,0,113	0/1:16,0:15:12.46:12,0,87	0/1:13,0:12:24.98:25,0,85	0/1:18,0:17:25.34:25,0,185	0/1:10,0:10:1.21:1,0,45	0/1:25,2:26:97.59:103,0,98	0/0:21,0:21:10.90:0,11,209	0/1:15,0:14:12.93:13,0,76	0/1:10,0:8:22.51:23,0,54	0/1:17,1:17:27.61:28,0,364	1/1:12,2:13:14.09:151,14,0	0/0:16,0:13:5.24:0,5,32	0/1:10,0:9:17.12:17,0,21	0/0:11,0:10:14.38:0,14,96	0/1:15,0:13:23.33:23,0,52	0/1:9,0:8:18.09:26,0,18	0/1:23,0:22:47.48:47,0,210	0/0:24,0:23:24.49:0,24,330	0/1:7,1:5:32.68:33,0,59
chr10	29816990	.	A	AGAGAG	4791.31	PASS	AB=1.000;AC=41;AF=0.732;AN=56;BaseQRankSum=4.665;DP=536;FS=45.393;HRun=0;HaplotypeScore=203.2761;InbreedingCoeff=0.2670;MQ=31.07;MQ0=29;MQRankSum=-3.242;QD=11.60;ReadPosRankSum=-0.464;VQSLOD=2.4420;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:23:20.51:21,0,69	1/1:12,0:9:17.95:238,18,0	0/0:39,0:11:17.09:0,17,196	0/0:48,0:6:8.32:0,8,112	1/1:14,1:14:3.01:92,3,0	1/1:22,0:22:34.68:236,35,0	1/1:15,0:12:12.85:141,13,0	0/1:34,0:30:19.89:304,0,20	0/0:24,0:23:41.89:0,42,575	1/1:12,0:10:20.19:285,20,0	1/1:14,0:13:2.86:26,3,0	1/1:17,0:16:16.23:178,16,0	0/1:21,0:19:4.40:452,0,4	1/1:13,0:13:14.70:164,15,0	0/1:30,0:29:0.90:156,0,1	1/1:21,0:21:35.46:327,35,0	1/1:9,0:9:15.93:233,16,0	1/1:9,0:7:10.73:158,11,0	0/1:20,0:19:5.63:325,0,6	0/0:12,0:11:4.50:0,4,22	1/1:16,0:13:5.93:40,6,0	1/1:10,0:9:3.44:21,3,0	1/1:12,0:11:2.94:21,3,0	1/1:15,0:12:11.73:73,12,0	0/1:12,0:11:26.69:32,0,27	1/1:21,0:19:41.23:528,41,0	1/1:19,6:24:11.08:671,11,0	0/1:12,0:6:7.10:70,0,7
chr10	29816994	.	A	AG	4206.35	PASS	AB=0.904;AC=36;AF=0.643;AN=56;BaseQRankSum=9.041;DP=528;FS=27.472;HRun=1;HaplotypeScore=177.8418;InbreedingCoeff=-0.0638;MQ=30.03;MQ0=32;MQRankSum=-4.628;QD=10.44;ReadPosRankSum=1.270;VQSLOD=0.0144;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:24:3.42:0,3,119	1/1:9,2:8:5.59:169,6,0	0/0:33,0:9:15.05:0,15,191	0/0:43,0:5:8.32:0,8,113	1/1:14,1:14:2.98:22,3,0	1/1:19,3:22:34.94:237,35,0	0/1:11,2:10:22.55:125,0,23	0/1:29,0:26:99:312,0,200	0/0:23,0:22:43.53:0,44,540	0/1:11,2:11:2.21:262,0,2	1/1:13,0:12:2.76:26,3,0	0/1:18,1:18:18.89:159,0,19	0/1:19,1:19:63.29:303,0,63	0/1:11,1:12:24.72:87,0,25	1/1:29,1:29:42.02:242,42,0	0/1:16,6:22:9.76:280,0,10	1/1:9,1:9:20.67:260,21,0	1/1:7,2:7:11.08:159,11,0	0/1:20,0:19:24.64:338,0,25	1/1:12,0:11:5.19:20,5,0	1/1:13,3:13:5.93:40,6,0	0/1:13,1:12:10.49:10,0,54	1/1:11,0:10:2.94:21,3,0	1/1:9,8:13:5.12:39,5,0	0/1:11,1:11:28.28:33,0,28	0/1:19,5:21:30.11:459,0,30	0/1:21,2:24:27.09:513,0,27	1/1:12,0:6:6.81:89,7,0
chr10	29816995	.	GA	G	3963.33	PASS	AB=0.705;AC=33;AF=0.589;AN=56;BaseQRankSum=10.107;DP=512;FS=57.859;HRun=1;HaplotypeScore=163.0691;InbreedingCoeff=-0.1106;MQ=30.28;MQ0=34;MQRankSum=-4.065;QD=10.51;ReadPosRankSum=1.154;VQSLOD=-0.6180;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:24:2.96:0,3,109	1/1:7,3:7:9.58:137,10,0	0/0:32,0:8:15.05:0,15,191	0/0:39,0:3:9.03:0,9,114	0/0:6,8:13:1.55:0,2,4	1/1:12,8:20:33.69:234,34,0	0/1:10,3:10:44.51:122,0,45	0/1:13,16:26:99:311,0,258	0/0:23,0:22:45.04:0,45,574	0/1:7,5:10:59.40:146,0,59	0/1:7,6:12:22.35:22,0,30	0/1:10,9:18:19.19:159,0,19	0/1:13,7:18:99:299,0,121	0/1:8,4:12:60.39:85,0,60	1/1:4,18:28:43.03:294,43,0	0/1:13,9:22:65.16:279,0,65	1/1:3,7:8:17.68:237,18,0	1/1:7,4:8:14.05:180,14,0	0/1:5,4:16:23.71:365,0,24	1/1:2,10:11:8.97:71,9,0	1/1:11,4:12:5.83:40,6,0	0/1:8,6:12:7.47:7,0,101	1/1:3,8:10:2.94:21,3,0	1/1:17,0:13:0.40:32,0,0	0/1:7,4:10:32.61:33,0,38	0/1:14,9:20:99:356,0,141	0/1:14,11:25:73.18:432,0,73	1/1:8,3:5:5.53:101,6,0
chr10	29818968	.	A	AT	16372.12	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=3.879;DP=593;FS=0.000;HRun=7;HaplotypeScore=86.9948;InbreedingCoeff=0.9936;MQ=80.29;MQ0=0;MQRankSum=-5.346;QD=30.15;ReadPosRankSum=3.629;VQSLOD=4.6707;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,27:30:72.22:862,72,0	1/1:1,7:8:18.06:217,18,0	0/0:14,0:14:39:0,39,357	0/0:20,0:20:41.16:0,41,396	1/1:3,20:23:56.98:633,57,0	1/1:0,22:22:63.19:761,63,0	1/1:4,28:32:66.20:797,66,0	1/1:4,33:37:96.21:1095,96,0	0/0:16,0:16:45.06:0,45,429	1/1:4,16:20:54.16:638,54,0	1/1:0,9:9:27.03:307,27,0	1/1:1,28:29:72.22:870,72,0	1/1:2,19:21:57.17:688,57,0	1/1:2,14:16:36.11:435,36,0	1/1:2,30:32:90.28:1087,90,0	1/1:2,22:24:63.19:761,63,0	1/1:1,23:24:57.17:688,57,0	1/1:2,17:19:48.15:579,48,0	1/1:3,15:18:45.05:490,45,0	1/1:0,12:12:30.09:362,30,0	1/1:1,17:18:51.16:616,51,0	1/1:1,19:20:45.10:527,45,0	1/1:2,17:19:45.14:544,45,0	1/1:2,27:29:78.24:942,78,0	1/1:0,29:29:75.23:906,75,0	1/1:2,22:25:66.10:733,66,0	1/1:1,19:20:51.16:616,51,0	1/1:1,6:7:18.06:217,18,0
chr10	29819201	.	C	CGGGCA	2777.71	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-5.451;DP=528;FS=8.529;HRun=0;HaplotypeScore=98.9456;InbreedingCoeff=0.8211;MQ=68.12;MQ0=0;MQRankSum=-1.724;QD=63.13;ReadPosRankSum=-0.034;VQSLOD=4.5030;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,37:44:96.33:2872,96,0	0/0:10,0:10:26.97:0,27,430	0/0:9,0:9:15.97:0,16,274	0/0:3,0:3:3.01:0,3,61	0/0:20,0:20:54.19:0,54,1106	0/0:15,0:15:39.13:0,39,757	0/0:39,0:39:99:0,111,2188	0/0:21,0:21:40.41:0,40,769	0/0:8,0:8:21.02:0,21,352	0/0:14,0:15:36.12:0,36,736	0/0:10,0:10:21.02:0,21,353	0/0:22,0:22:53.97:0,54,1051	0/0:17,0:17:51.16:0,51,1008	0/0:20,0:20:45.15:0,45,900	0/0:8,0:8:24.08:0,24,480	0/0:13,0:13:29.89:0,30,509	0/0:32,0:32:81.23:0,81,1615	0/0:34,0:34:96.33:0,96,1931	0/0:16,0:16:36.12:0,36,733	0/0:6,0:6:18.01:0,18,322	0/0:41,0:41:99:0,110,2066	0/0:19,0:19:45.15:0,45,922	0/0:16,0:16:42.10:0,42,807	0/0:38,0:38:99:0,99,1984	0/0:18,0:18:42.14:0,42,857	0/0:15,0:15:33.11:0,33,662	0/0:10,0:10:21.07:0,21,429	0/0:9,0:9:21.07:0,21,430
chr10	29819545	.	TA	T	5932.04	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-3.216;DP=445;FS=0.000;HRun=12;HaplotypeScore=53.5287;InbreedingCoeff=0.7526;MQ=75.74;MQ0=0;MQRankSum=-2.876;QD=14.50;ReadPosRankSum=2.096;VQSLOD=5.4294;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,13:22:13.84:237,14,0	1/1:2,6:8:14.93:116,15,0	0/0:13,0:11:14.63:0,15,116	0/0:13,0:13:6.10:0,6,126	1/1:3,6:9:8.90:70,9,0	1/1:7,8:15:17.86:139,18,0	1/1:2,17:20:46.86:354,47,0	1/1:9,23:34:63.75:470,64,0	0/0:10,0:10:21.03:0,21,208	1/1:3,10:13:26.87:209,27,0	1/1:8,7:16:0.33:143,0,0	1/1:4,17:21:41.80:325,42,0	1/1:5,8:13:23.89:186,24,0	1/1:2,11:13:29.72:232,30,0	1/1:3,8:11:23.88:186,24,0	1/1:2,18:21:52.84:400,53,0	1/1:3,16:19:38.34:301,38,0	1/1:2,14:17:43.87:331,44,0	1/1:4,16:20:38.73:297,39,0	1/1:4,6:10:10.17:90,10,0	1/1:4,11:16:36.94:267,37,0	1/1:5,12:17:2.39:202,2,0	1/1:3,6:9:8.21:68,8,0	1/1:2,21:24:55.69:424,56,0	1/1:5,12:17:26.82:209,27,0	1/1:3,14:18:34.81:258,35,0	1/1:2,11:13:29.88:232,30,0	1/1:2,11:13:23.90:186,24,0
chr10	29820554	.	A	AGG	1237.29	PASS	AB=1.000;AC=38;AF=0.731;AN=52;BaseQRankSum=-4.334;DP=234;FS=0.000;HRun=1;HaplotypeScore=67.1894;InbreedingCoeff=0.2131;MQ=51.62;MQ0=0;MQRankSum=0.033;QD=6.41;ReadPosRankSum=0.902;VQSLOD=-0.3086;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:13:17.84:127,18,0	0/0:5,0:5:1.55:0,2,4	0/1:7,0:5:0.02:0,0,0	0/0:7,0:7:10.64:0,11,123	./.	1/1:13,0:13:15.55:95,16,0	1/1:11,0:11:6.85:47,7,0	0/1:6,0:6:3.23:64,0,3	0/1:6,0:6:11.80:12,0,13	0/1:12,0:11:40.25:68,0,40	0/1:7,0:7:0:0,0,0	1/1:13,0:12:8.69:84,9,0	1/1:8,0:8:9.37:61,9,0	0/0:14,0:14:2.08:0,2,9	1/1:14,0:14:2.97:20,3,0	1/1:13,0:13:11.69:90,12,0	1/1:8,0:8:20.82:147,21,0	1/1:1,0:1:2.98:21,3,0	0/1:9,0:9:26.44:68,0,26	1/1:6,0:6:6.42:43,6,0	1/1:6,0:6:6.02:81,6,0	./.	1/1:6,0:6:8.89:59,9,0	0/1:5,0:5:0:0,0,0	1/1:8,0:8:5.94:68,6,0	0/1:12,0:12:1.79:117,0,2	1/1:7,0:7:10.16:64,10,0	1/1:2,0:2:5.78:31,6,0
chr10	29821471	.	C	CCT	70.70	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.371;DP=568;FS=10.701;HRun=0;HaplotypeScore=74.4414;InbreedingCoeff=0.8540;MQ=57.77;MQ0=49;MQRankSum=-1.826;QD=4.71;ReadPosRankSum=-0.796;VQSLOD=1.3297;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:72.09:0,72,818	0/0:7,0:7:21.06:0,21,247	0/0:67,0:13:18.63:0,19,214	0/0:80,0:20:31.74:0,32,312	0/0:25,0:25:53.68:0,54,608	0/0:18,0:18:42.10:0,42,516	0/0:15,0:15:28.19:0,28,341	0/0:32,0:31:57.17:0,57,690	1/1:1,14:15:12.01:157,12,0	0/0:16,0:16:36.09:0,36,420	0/0:14,0:13:26.82:0,27,332	0/0:13,0:11:27.39:0,27,310	0/0:10,0:10:15.05:0,15,184	0/0:9,0:7:12.04:0,12,144	0/0:16,0:14:33.08:0,33,382	0/0:14,0:14:32.82:0,33,391	0/0:25,0:24:43.12:0,43,533	0/0:11,0:10:10.34:0,10,245	0/0:10,0:10:16.76:0,17,205	0/0:12,0:11:30.09:0,30,368	0/0:14,0:13:20.96:0,21,241	0/0:10,0:9:23.72:0,24,246	0/0:12,0:12:24.07:0,24,295	0/0:29,0:26:53.71:0,54,636	0/0:15,0:13:27.08:0,27,332	0/0:18,0:17:35.97:0,36,406	0/0:12,0:11:29.71:0,30,321	0/0:16,0:10:23.86:0,24,271
chr10	29822209	.	CG	C	339.20	PASS	AB=0.903;AC=3;AF=0.054;AN=56;BaseQRankSum=-4.912;DP=451;FS=0.000;HRun=10;HaplotypeScore=108.4402;InbreedingCoeff=0.5143;MQ=85.75;MQ0=0;MQRankSum=1.209;QD=7.07;ReadPosRankSum=1.199;VQSLOD=1.8982;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:44.42:0,44,202	0/0:5,0:5:10.71:0,11,44	0/0:22,0:24:18.88:0,19,205	0/1:24,3:23:49:49,0,297	0/0:13,0:13:26.98:0,27,114	0/0:17,0:17:24.02:0,24,98	0/0:17,0:17:32.40:0,32,139	0/0:16,0:16:30.84:0,31,134	1/1:5,14:20:47.01:396,47,0	0/0:16,0:16:40.38:0,40,170	0/0:13,0:13:29.38:0,29,121	0/0:20,0:20:40.36:0,40,169	0/0:19,0:19:40.18:0,40,166	0/0:23,0:23:37.63:0,38,157	0/0:11,0:16:11.55:0,12,68	0/0:12,0:12:29.53:0,30,122	0/0:9,0:20:14.45:0,14,82	0/0:6,0:12:11.49:0,11,59	0/0:4,0:6:5.82:0,6,36	0/0:4,0:10:12.65:0,13,75	0/0:11,0:23:8.56:0,9,43	0/0:14,0:14:32.30:0,32,135	0/0:10,0:10:21.53:0,22,90	0/0:10,0:10:24.11:0,24,100	0/0:16,0:16:32.34:0,32,135	0/0:16,0:16:29.58:0,30,123	0/0:23,0:23:45.73:0,46,190	0/0:12,0:12:29.46:0,29,122
chr10	29822213	.	G	GC	412.59	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-2.051;DP=443;FS=7.179;HRun=0;HaplotypeScore=105.8377;InbreedingCoeff=0.7751;MQ=85.49;MQ0=0;MQRankSum=-4.740;QD=19.65;ReadPosRankSum=0.963;VQSLOD=5.5216;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,18:21:52.36:507,52,0	0/0:5,0:5:13.45:0,13,68	0/0:24,0:23:51.63:0,52,473	0/0:28,0:23:33.12:0,33,436	0/0:13,0:13:28.59:0,29,141	0/0:14,0:14:21.54:0,22,112	0/0:17,0:17:37.70:0,38,205	0/0:17,0:17:47.78:0,48,275	0/0:22,0:22:65.28:0,65,457	0/0:19,0:19:52.31:0,52,319	0/0:13,0:13:26.50:0,26,135	0/0:19,0:19:22.90:0,23,96	0/0:20,0:20:29.16:0,29,101	0/0:21,0:21:8.75:0,9,72	0/0:14,0:14:22.54:0,23,198	0/0:13,0:13:27.44:0,27,115	0/0:17,0:17:23.85:0,24,162	0/0:9,0:9:17.70:0,18,123	0/0:6,0:6:17.66:0,18,136	0/0:12,0:12:20.61:0,21,133	0/0:19,0:19:4.79:0,5,85	0/0:14,0:14:24.94:0,25,101	0/0:10,0:10:13.56:0,14,76	0/0:9,0:9:19.77:0,20,66	0/0:16,0:16:37.96:0,38,203	0/0:16,0:16:24.93:0,25,218	0/0:23,0:23:30.66:0,31,128	0/0:12,0:12:22.60:0,23,86
chr10	29822214	.	G	GGA	6262.90	PASS	AB=1.000;AC=42;AF=0.750;AN=56;BaseQRankSum=3.161;DP=441;FS=5.956;HRun=0;HaplotypeScore=91.7108;InbreedingCoeff=0.4629;MQ=83.99;MQ0=0;MQRankSum=-3.846;QD=17.64;ReadPosRankSum=7.012;VQSLOD=4.0660;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:22:15.12:15,0,74	1/1:5,0:5:12:112,12,0	0/0:22,0:21:26.54:0,27,409	0/0:28,0:23:32.97:0,33,502	1/1:12,2:14:29.74:346,30,0	1/1:14,0:14:26.18:213,26,0	1/1:16,0:16:47.58:404,48,0	1/1:18,0:18:46.93:368,47,0	0/0:22,0:22:59.80:0,60,473	1/1:19,0:19:55.92:523,56,0	1/1:13,0:13:32.98:301,33,0	1/1:19,0:19:44.96:415,45,0	1/1:20,0:20:45.05:421,45,0	1/1:22,0:22:42.01:385,42,0	0/1:12,0:12:18.84:19,0,110	1/1:13,1:14:33.05:334,33,0	0/1:17,0:17:55.41:55,0,75	0/1:8,0:8:31.86:43,0,32	0/1:8,0:8:12.89:13,0,65	0/0:14,0:14:5.24:0,5,109	0/1:19,0:19:0.56:1,0,79	1/1:13,0:13:35.41:319,35,0	1/1:8,2:10:23.72:262,24,0	1/1:10,0:10:27.03:254,27,0	1/1:14,1:15:36.04:358,36,0	1/1:12,0:12:35.82:331,36,0	1/1:23,0:23:50.94:470,51,0	1/1:12,0:12:32.88:298,33,0
chr10	29822215	.	G	GA	8800.46	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-3.801;DP=436;FS=0.426;HRun=0;HaplotypeScore=75.3353;InbreedingCoeff=0.9817;MQ=83.45;MQ0=0;MQRankSum=-1.980;QD=32.35;ReadPosRankSum=5.766;VQSLOD=4.5185;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:27.72:0,28,228	1/1:0,4:4:12.04:167,12,0	0/0:21,0:20:24.99:0,25,358	0/0:28,0:23:19.25:0,19,405	1/1:2,11:13:32.99:390,33,0	1/1:1,15:16:26.88:376,27,0	1/1:7,10:17:47.55:564,48,0	1/1:0,18:18:50.86:558,51,0	0/0:20,0:20:59.17:0,59,393	1/1:0,20:20:60.13:736,60,0	1/1:0,12:12:33.10:457,33,0	1/1:0,19:19:45.15:621,45,0	1/1:0,21:21:44.71:625,45,0	1/1:0,22:22:42.14:577,42,0	0/0:12,0:12:17.40:0,17,149	1/1:1,13:14:33.10:445,33,0	0/0:16,0:16:23.90:0,24,160	0/0:9,0:9:14.68:0,15,97	0/0:6,0:6:17.68:0,18,143	0/0:14,0:14:35.64:0,36,251	0/0:17,0:17:10.79:0,11,136	1/1:0,13:13:36.12:492,36,0	1/1:2,7:10:24.06:304,24,0	1/1:1,10:11:26.77:375,27,0	1/1:1,12:13:36.11:484,36,0	1/1:0,12:12:36.09:475,36,0	1/1:0,22:23:51.16:693,51,0	1/1:2,11:14:32.85:460,33,0
chr10	29822219	.	G	GA	409.82	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=-1.237;DP=426;FS=4.179;HRun=2;HaplotypeScore=104.1372;InbreedingCoeff=0.5483;MQ=83.02;MQ0=0;MQRankSum=-2.583;QD=11.38;ReadPosRankSum=0.151;VQSLOD=1.9545;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,15:21:58.70:504,59,0	0/0:6,0:6:15.03:0,15,71	0/0:18,0:18:5.33:0,5,238	0/0:27,0:24:31.05:0,31,382	0/0:13,0:14:6.88:0,7,80	0/1:15,0:15:0.14:0,0,56	0/0:14,0:14:29.61:0,30,122	0/0:18,0:18:51.85:0,52,291	0/0:19,0:19:52.77:0,53,319	0/0:19,0:19:54.61:0,55,317	0/0:11,0:11:23.35:0,23,99	0/0:17,0:17:22.62:0,23,94	0/0:20,0:20:36.09:0,36,140	0/0:17,0:17:20.55:0,21,78	0/0:8,0:8:3.18:0,3,39	0/0:16,0:16:27.61:0,28,113	0/0:15,0:15:22.78:0,23,141	0/0:11,0:11:18.93:0,19,119	0/0:7,0:7:17.30:0,17,137	0/0:14,0:14:34.63:0,35,250	0/0:17,0:17:12.79:0,13,151	0/0:13,0:13:16.49:0,16,84	0/0:14,0:14:13.47:0,13,94	0/0:13,0:13:21.44:0,21,78	0/0:13,0:13:25.98:0,26,106	0/0:11,0:11:16.59:0,17,103	0/0:20,0:21:24.77:0,25,101	0/0:16,0:16:27.81:0,28,123
chr10	29825248	.	TGTGTGTGTGTGTG	T	6222.33	PASS	AB=0.839;AC=16;AF=0.286;AN=56;BaseQRankSum=7.662;DP=686;FS=17.858;HRun=0;HaplotypeScore=313.1426;InbreedingCoeff=0.1105;MQ=46.81;MQ0=22;MQRankSum=-6.420;QD=23.05;ReadPosRankSum=5.911;VQSLOD=1.9256;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:34:58.27:533,0,58	0/0:21,0:21:11.49:0,11,292	0/0:40,0:13:36.09:0,36,479	0/0:55,0:18:54.17:0,54,888	0/0:22,0:21:12.30:0,12,303	1/1:8,7:15:10.45:706,10,0	0/1:15,4:19:97.31:342,0,97	0/0:21,0:19:52.96:0,53,487	0/0:23,0:23:49.39:0,49,1582	0/0:37,0:37:80.06:0,80,1034	0/1:21,0:22:51.15:51,0,496	0/1:14,7:21:31.59:649,0,32	0/1:3,7:10:6.53:599,0,7	1/1:7,9:15:39.09:952,39,0	0/0:31,0:31:82.08:0,82,3406	0/1:27,0:27:25.65:26,0,133	0/0:28,0:28:62.54:0,63,1484	0/0:20,0:20:57.06:0,57,1091	0/1:12,0:12:8.33:8,0,251	0/1:26,0:26:98.80:99,0,442	0/0:23,0:22:6.44:0,6,276	0/1:18,12:29:9.53:1169,0,10	1/1:14,7:20:7.73:754,8,0	0/1:12,4:15:66.28:335,0,66	0/0:25,0:25:45.79:0,46,520	0/0:36,0:36:89.16:0,89,915	0/0:18,0:17:10.01:0,10,183	0/0:16,0:16:8.64:0,9,247
chr10	29825250	.	TGTGTGTGTGTG	T	6906.26	PASS	AB=0.972;AC=22;AF=0.393;AN=56;BaseQRankSum=15.236;DP=685;FS=17.005;HRun=0;HaplotypeScore=287.5042;InbreedingCoeff=-0.3376;MQ=48.93;MQ0=21;MQRankSum=-11.211;QD=15.63;ReadPosRankSum=10.410;VQSLOD=1.3970;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:26,9:35:90.29:517,0,90	0/1:21,0:21:99:180,0,113	0/0:46,0:17:44.84:0,45,533	0/0:55,0:20:60.19:0,60,875	0/1:20,0:20:99:116,0,129	1/1:15,0:15:8.18:589,8,0	0/1:20,0:20:99:283,0,105	0/0:21,0:19:49.52:0,50,309	0/0:21,0:21:43.03:0,43,1298	0/1:35,0:35:99:141,0,408	0/1:19,1:20:99:119,0,236	0/1:21,0:21:41.77:512,0,42	0/1:10,0:10:6.53:502,0,7	1/1:16,0:15:39.04:796,39,0	0/0:32,0:32:84.45:0,84,2863	0/1:27,0:28:31.55:391,0,32	0/0:27,0:27:62.54:0,63,1056	0/0:20,0:20:56.68:0,57,788	0/1:12,0:13:55.44:55,0,182	0/1:24,1:27:99:333,0,178	0/0:21,0:20:4.74:0,5,152	0/1:30,0:29:21.93:936,0,22	0/1:21,0:20:6.27:621,0,6	0/1:15,0:14:45.18:259,0,45	0/1:25,0:25:99:146,0,190	0/1:35,0:35:62.22:62,0,412	0/1:18,0:17:60.19:214,0,60	0/1:16,0:16:89.42:135,0,89
chr10	29825254	.	TGTGTGTG	T	7083.44	PASS	AB=0.870;AC=22;AF=0.393;AN=56;BaseQRankSum=15.024;DP=645;FS=14.640;HRun=0;HaplotypeScore=231.8635;InbreedingCoeff=-0.4878;MQ=53.20;MQ0=21;MQRankSum=-12.399;QD=16.79;ReadPosRankSum=9.846;VQSLOD=1.9760;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:32,0:32:99:225,0,126	1/1:10,10:20:0.79:498,1,0	0/0:48,0:19:50.89:0,51,586	0/0:56,0:23:69.22:0,69,870	0/1:13,7:19:48.39:255,0,48	0/1:16,0:16:22.88:357,0,23	0/1:21,0:21:99:169,0,114	0/0:21,0:19:26.42:0,26,163	0/0:20,0:20:39.12:0,39,839	0/1:22,8:30:99:452,0,122	0/1:8,6:14:10.98:221,0,11	0/1:21,0:21:61.77:290,0,62	0/1:10,0:10:6.95:308,0,7	0/1:18,0:17:11.95:412,0,12	0/0:32,0:32:84.23:0,84,1834	0/1:15,14:29:34.03:841,0,34	0/0:25,0:26:11.20:0,11,185	0/0:19,1:20:31.97:0,32,218	0/1:10,1:11:77.26:77,0,112	0/1:11,7:17:17.42:440,0,17	0/1:17,1:17:0.17:0,0,63	0/1:27,0:26:91.71:456,0,92	0/1:20,0:19:31.41:354,0,31	0/1:15,0:14:46.32:151,0,46	0/1:15,9:24:40.92:481,0,41	0/1:24,6:30:99:313,0,213	0/1:6,9:15:18.13:506,0,18	0/1:8,5:13:42.78:278,0,43
chr10	29825258	.	TGTG	T	2904.53	PASS	AB=0.982;AC=23;AF=0.411;AN=56;BaseQRankSum=15.942;DP=658;FS=17.948;HRun=0;HaplotypeScore=204.9759;InbreedingCoeff=-0.6685;MQ=58.32;MQ0=20;MQRankSum=-13.311;QD=6.13;ReadPosRankSum=8.492;VQSLOD=0.9299;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:33:73.28:73,0,177	0/1:18,0:18:22.53:188,0,23	0/0:52,0:24:65.18:0,65,750	0/0:56,0:24:72.22:0,72,890	0/1:21,0:20:77.61:95,0,78	0/1:17,0:17:32.41:159,0,32	0/1:23,0:23:52.22:52,0,133	0/0:21,0:19:50.83:0,51,221	0/0:22,0:22:42.13:0,42,634	0/1:28,0:28:99:132,0,145	0/1:13,0:13:37.42:61,0,37	0/1:21,0:21:83.46:109,0,83	0/1:13,0:13:49.41:123,0,49	0/1:19,0:18:44.55:181,0,45	0/0:33,0:33:75.02:0,75,802	0/1:28,0:28:43.07:354,0,43	0/1:17,8:25:49.97:281,0,50	0/1:15,4:19:96.38:128,0,96	0/1:15,0:15:10.54:11,0,151	0/1:18,0:17:40.91:152,0,41	0/1:18,0:17:1.06:1,0,62	0/1:27,0:26:99:182,0,122	0/1:20,0:19:40.80:185,0,41	0/1:14,0:13:39.60:69,0,40	0/1:28,0:28:99:138,0,122	0/1:30,0:30:68.71:69,0,234	0/1:15,0:15:18.27:219,0,18	0/1:11,0:11:48.22:98,0,48
chr10	29826764	.	A	AC	18929.57	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=3.032;DP=543;FS=0.000;HRun=1;HaplotypeScore=86.7823;InbreedingCoeff=0.9774;MQ=87.85;MQ0=0;MQRankSum=-8.159;QD=38.95;ReadPosRankSum=4.826;VQSLOD=5.1724;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,18:20:51.17:763,51,0	1/1:0,7:7:21.07:314,21,0	0/0:22,0:22:48.09:0,48,543	0/0:18,0:18:49.84:0,50,547	1/1:1,17:18:48.16:717,48,0	1/1:0,30:30:84.28:1258,84,0	1/1:0,18:18:51.17:764,51,0	1/1:1,24:25:66.21:968,66,0	0/0:17,0:17:48.16:0,48,623	1/1:0,19:19:57.12:787,57,0	1/1:1,28:29:75.17:1093,75,0	1/1:1,25:26:66.16:956,66,0	1/1:0,22:22:60.20:898,60,0	1/1:0,10:10:30.10:449,30,0	1/1:0,21:21:57.19:854,57,0	1/1:0,18:18:51.17:764,51,0	1/1:1,12:13:29.69:415,30,0	1/1:0,19:19:47.80:718,48,0	1/1:2,26:28:78.23:1117,78,0	1/1:1,20:21:57.07:801,57,0	1/1:0,12:12:36.12:539,36,0	1/1:0,13:13:30.10:449,30,0	1/1:0,21:21:54.18:808,54,0	1/1:0,13:13:36.12:539,36,0	1/1:1,15:16:33.11:494,33,0	1/1:0,25:25:75.25:1116,75,0	1/1:1,31:31:81.27:1213,81,0	1/1:1,9:10:9.03:135,9,0
chr10	29827645	.	A	AAC	26290.29	PASS	AB=0.700;AC=49;AF=0.875;AN=56;BaseQRankSum=-4.490;DP=810;FS=3.093;HRun=0;HaplotypeScore=147.6743;InbreedingCoeff=0.8427;MQ=62.61;MQ0=1;MQRankSum=-2.514;QD=36.98;ReadPosRankSum=5.637;VQSLOD=6.6484;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,32:37:45.50:1426,46,0	1/1:1,11:12:33.11:532,33,0	0/0:42,0:32:37.98:0,38,484	0/0:32,0:23:23.90:0,24,420	1/1:11,23:34:78.27:1271,78,0	1/1:7,21:29:25.53:906,26,0	1/1:6,22:28:57.19:915,57,0	1/1:12,28:40:46.69:1201,47,0	0/0:25,0:25:63.16:0,63,769	1/1:14,23:37:61.81:1486,62,0	0/1:8,6:14:10.44:345,0,10	1/1:14,22:36:81.27:1309,81,0	1/1:9,19:28:69.21:1080,69,0	1/1:10,19:30:34.71:1095,35,0	1/1:8,33:40:99:1686,105,0	1/1:8,24:32:72.25:1184,72,0	1/1:4,23:27:66.23:1087,66,0	1/1:9,14:23:39.35:871,39,0	1/1:9,17:26:14.81:754,15,0	1/1:7,25:32:87.26:1315,87,0	1/1:5,29:34:75.25:1211,75,0	1/1:13,21:34:84.29:1355,84,0	1/1:6,15:21:48.16:778,48,0	1/1:7,18:25:57.19:930,57,0	1/1:7,23:30:76.61:1229,77,0	1/1:12,20:31:69.21:1078,69,0	1/1:2,14:16:42.14:653,42,0	1/1:2,11:13:36.12:594,36,0
chr10	29827720	.	GTATATTACAGCAT	G	44278.63	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=11.424;DP=618;FS=14.790;HRun=0;HaplotypeScore=285.0936;InbreedingCoeff=0.9825;MQ=76.81;MQ0=0;MQRankSum=-12.582;QD=80.95;ReadPosRankSum=6.014;VQSLOD=3.3891;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,12:19:42.07:1295,42,0	1/1:1,5:6:15.05:555,15,0	0/0:28,0:28:78.27:0,78,4623	0/0:18,0:18:48.16:0,48,2616	1/1:3,28:31:75.26:2814,75,0	1/1:2,14:16:42.14:1694,42,0	1/1:4,17:21:45.15:1750,45,0	1/1:12,23:35:69.24:2507,69,0	0/0:25,0:25:75.26:0,75,4600	1/1:4,30:34:86.96:3153,87,0	1/1:4,15:19:36.12:1452,36,0	1/1:4,29:33:90.30:3478,90,0	1/1:4,20:24:60.21:2419,60,0	1/1:5,19:24:57.20:2223,57,0	1/1:7,20:27:57.17:2173,57,0	1/1:6,13:19:39.13:1573,39,0	1/1:9,9:18:30.10:1156,30,0	1/1:5,9:14:18.06:661,18,0	1/1:4,7:11:27.09:1013,27,0	1/1:12,20:32:63.22:2368,63,0	1/1:11,7:18:21.04:667,21,0	1/1:3,19:22:51.17:1953,51,0	1/1:7,23:30:63.22:2421,63,0	1/1:8,12:20:21.07:779,21,0	1/1:4,18:22:45.15:1711,45,0	1/1:4,19:23:54.17:2065,54,0	1/1:7,16:23:45.15:1815,45,0	1/1:1,5:6:15.05:583,15,0
chr10	29829021	.	T	TATTC	27190	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-7.769;DP=789;FS=1.548;HRun=0;HaplotypeScore=102.0281;InbreedingCoeff=0.9060;MQ=63.66;MQ0=7;MQRankSum=-0.920;QD=38.46;ReadPosRankSum=0.538;VQSLOD=4.6481;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:12,0:28:21.91:352,22,0	1/1:3,10:13:15.05:368,15,0	0/0:30,0:19:18.06:0,18,295	0/0:26,0:20:24.45:0,24,421	1/1:3,19:25:51.11:1138,51,0	1/1:5,15:22:27.09:661,27,0	1/1:11,15:26:42.08:923,42,0	1/1:17,13:30:39.13:907,39,0	0/0:4,0:26:45.05:0,45,419	1/1:9,23:33:78.25:1747,78,0	1/1:10,15:26:42.14:891,42,0	1/1:10,21:33:54.12:1252,54,0	1/1:8,18:26:48.16:1160,48,0	1/1:7,33:41:78.16:1786,78,0	1/1:7,35:41:78.27:1894,78,0	1/1:8,23:33:48.16:1141,48,0	1/1:7,20:27:45.63:1087,46,0	1/1:3,7:10:18.06:441,18,0	1/1:15,12:29:45.12:893,45,0	1/1:9,27:37:81.28:1829,81,0	1/1:1,22:24:51.18:1249,51,0	1/1:6,23:31:54.10:1146,54,0	1/1:13,23:36:8.12:1258,8,0	1/1:11,17:30:48.16:1137,48,0	1/1:6,24:31:39.13:956,39,0	1/1:12,18:30:60.21:1415,60,0	1/1:2,24:26:63.17:1487,63,0	1/1:11,4:16:3.01:74,3,0
chr10	29829475	.	C	CTGTGTGTGTG	15296.46	PASS	AB=0.956;AC=45;AF=0.804;AN=56;BaseQRankSum=0.981;DP=759;FS=0.000;HRun=0;HaplotypeScore=281.4856;InbreedingCoeff=0.1047;MQ=55.74;MQ0=5;MQRankSum=-7.020;QD=21.57;ReadPosRankSum=-0.735;VQSLOD=3.4627;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:40:77.32:77,0,533	1/1:17,0:17:30.05:607,30,0	0/1:26,0:18:6.43:18,0,6	0/0:28,0:19:1.07:0,1,199	1/1:39,0:39:7.35:393,7,0	1/1:24,0:24:1.10:570,1,0	0/1:20,0:20:4.90:207,0,5	0/1:47,0:42:22.83:722,0,23	0/0:7,0:22:40.74:0,41,1066	1/1:31,0:31:30.61:1229,31,0	1/1:32,0:32:21.68:493,22,0	1/1:27,0:27:43.82:906,44,0	1/1:21,0:21:36.12:817,36,0	1/1:23,0:24:50.29:889,50,0	1/1:9,14:26:14.37:596,14,0	0/1:41,0:41:6.88:1044,0,7	1/1:21,2:23:21.05:491,21,0	1/1:7,6:16:18.06:661,18,0	1/1:24,0:23:40.85:723,41,0	1/1:28,2:31:28.19:737,28,0	1/1:19,0:19:9.27:173,9,0	1/1:29,0:30:36.88:580,37,0	0/1:35,0:35:24.24:425,0,24	1/1:26,0:27:3.04:206,3,0	1/1:29,0:29:20.13:644,20,0	1/1:32,0:32:42.85:1248,43,0	0/1:20,0:21:42.49:598,0,42	1/1:6,0:6:12.04:240,12,0
chr10	29829493	.	G	GTGTGTGTA	23281.71	PASS	AB=1.000;AC=42;AF=0.750;AN=56;BaseQRankSum=-7.781;DP=788;FS=15.765;HRun=0;HaplotypeScore=224.5007;InbreedingCoeff=0.4215;MQ=50.31;MQ0=10;MQRankSum=-4.375;QD=36.10;ReadPosRankSum=3.707;VQSLOD=2.6975;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:42:47.53:0,48,658	1/1:6,8:14:36.09:1136,36,0	0/0:39,0:21:28.97:0,29,267	0/0:40,0:23:21.04:0,21,435	1/1:24,12:36:44.83:959,45,0	1/1:10,12:23:63.13:1507,63,0	1/1:9,12:24:14.88:449,15,0	1/1:41,0:36:41.89:394,42,0	0/0:22,0:22:60.14:0,60,1058	1/1:22,12:34:74.98:1975,75,0	1/1:24,6:32:49.59:1018,50,0	1/1:19,11:32:62.83:1779,63,0	1/1:17,7:24:49.24:1154,49,0	1/1:16,9:27:60.14:1728,60,0	0/1:23,0:23:27.55:281,0,28	1/1:20,16:39:69.09:2079,69,0	0/1:26,0:26:68.83:267,0,69	0/1:14,0:14:3.12:277,0,3	0/1:22,0:21:99:188,0,110	0/1:27,0:27:39.40:399,0,39	0/1:23,0:22:47.68:48,0,119	1/1:18,9:29:34.27:1184,34,0	1/1:20,11:32:45.03:1069,45,0	1/1:22,5:28:33.04:606,33,0	1/1:18,11:29:60.11:1389,60,0	1/1:23,11:36:81.99:2030,82,0	1/1:15,6:23:39.05:1042,39,0	1/1:4,2:7:2.03:323,2,0
chr10	29829577	.	A	AT	17950.51	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-7.664;DP=648;FS=26.026;HRun=7;HaplotypeScore=67.7836;InbreedingCoeff=0.9967;MQ=69.92;MQ0=0;MQRankSum=-9.142;QD=29.87;ReadPosRankSum=5.575;VQSLOD=3.1197;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,35:35:99:1232,102,0	1/1:0,9:9:27.08:326,27,0	0/0:20,0:20:51.21:0,51,532	0/0:27,0:25:63.07:0,63,595	1/1:4,25:29:52.21:875,52,0	1/1:3,29:32:84.26:1015,84,0	1/1:1,19:20:25.19:586,25,0	1/1:9,32:41:87.22:1034,87,0	1/1:4,9:13:27.08:326,27,0	1/1:1,20:21:60.18:725,60,0	1/1:1,15:16:42.09:491,42,0	1/1:5,20:25:51.16:616,51,0	1/1:4,20:24:31.21:659,31,0	1/1:0,30:30:87.27:1051,87,0	1/1:0,24:24:69.21:834,69,0	1/1:2,20:22:54.17:652,54,0	1/1:4,28:32:81.25:978,81,0	1/1:0,15:16:38.99:449,39,0	1/1:4,25:29:46.25:841,46,0	1/1:2,20:22:57.01:623,57,0	1/1:4,22:26:54.17:652,54,0	1/1:2,17:19:45.14:543,45,0	1/1:2,24:26:66.20:797,66,0	1/1:2,14:16:36.11:435,36,0	1/1:2,21:23:57.17:689,57,0	1/1:4,13:17:39.12:471,39,0	1/1:1,24:25:63.19:761,63,0	1/1:1,8:9:24.07:290,24,0
chr10	29830128	.	CT	C	618.94	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.786;DP=631;FS=0.000;HRun=9;HaplotypeScore=76.6254;InbreedingCoeff=0.9745;MQ=70.85;MQ0=0;MQRankSum=-0.002;QD=19.97;ReadPosRankSum=1.263;VQSLOD=4.0171;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,29:31:78.04:714,78,0	0/0:7,0:7:15.04:0,15,173	0/0:23,0:22:42.11:0,42,471	0/0:10,0:10:17.51:0,18,165	0/0:48,0:48:99:0,132,1485	0/0:20,0:20:60.18:0,60,692	0/0:21,0:21:51.15:0,51,588	0/0:31,0:30:75.21:0,75,857	0/0:17,0:17:42.11:0,42,474	0/0:27,0:27:69.21:0,69,796	0/0:20,0:21:50.96:0,51,551	0/0:24,0:24:63.18:0,63,719	0/0:27,0:27:72.17:0,72,809	0/0:17,0:17:36.10:0,36,407	0/0:22,0:22:57.14:0,57,644	0/0:25,0:25:72.20:0,72,816	0/0:26,0:26:75.18:0,75,843	0/0:18,0:18:50.93:0,51,533	0/0:22,0:22:57.17:0,57,658	0/0:26,0:26:72.20:0,72,823	0/0:15,0:16:38.94:0,39,421	0/0:21,0:21:60.18:0,60,691	0/0:20,0:20:51.14:0,51,579	0/0:14,0:14:30.07:0,30,335	0/0:30,0:30:87.23:0,87,983	0/0:26,0:26:69.11:0,69,745	0/0:30,0:29:81.22:0,81,922	0/0:11,0:11:30.09:0,30,346
chr10	29830317	.	AACTTTG	A	20677.59	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=17.172;DP=666;FS=3.578;HRun=0;HaplotypeScore=162.9475;InbreedingCoeff=0.9902;MQ=68.01;MQ0=1;MQRankSum=-18.469;QD=52.22;ReadPosRankSum=0.143;VQSLOD=5.0543;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,108,3672	1/1:1,12:13:36.12:801,36,0	0/0:29,0:27:78.27:0,78,2494	0/0:26,0:25:61.88:0,62,2023	1/1:2,33:35:84.13:1682,84,0	1/1:4,19:23:48.16:1091,48,0	1/1:1,18:19:48.16:1104,48,0	1/1:5,20:25:60.18:1239,60,0	0/0:24,0:24:69.24:0,69,2409	1/1:2,15:17:45.15:1037,45,0	1/1:2,20:22:57.15:1198,57,0	1/1:4,22:26:63.22:1437,63,0	1/1:1,24:25:63.22:1430,63,0	1/1:1,18:19:51.18:1175,51,0	0/0:25,0:25:72.22:0,72,2343	1/1:2,35:37:93.32:2141,93,0	0/0:25,0:25:66.19:0,66,2070	0/0:21,0:21:54.14:0,54,1750	0/0:20,0:20:48.14:0,48,1544	0/0:24,0:24:66.23:0,66,2292	0/0:31,0:31:87.26:0,87,2741	1/1:3,17:20:45.15:987,45,0	1/1:3,19:22:51.13:1064,51,0	1/1:3,12:15:9.03:192,9,0	1/1:0,22:22:45.15:1022,45,0	1/1:1,17:18:48.16:1088,48,0	1/1:4,25:28:69.23:1590,69,0	1/1:0,9:9:18.06:400,18,0
chr10	29831817	.	GTACT	G	3036.51	PASS	AB=0.992;AC=35;AF=0.625;AN=56;BaseQRankSum=17.912;DP=682;FS=5.379;HRun=0;HaplotypeScore=309.8450;InbreedingCoeff=0.0041;MQ=77.58;MQ0=0;MQRankSum=-16.093;QD=5.34;ReadPosRankSum=10.361;VQSLOD=0.5810;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,111,3110	1/1:15,0:15:23.76:96,24,0	0/0:23,0:23:65.52:0,66,1719	0/0:25,0:25:75.18:0,75,1959	1/1:21,0:21:35.41:153,35,0	0/1:20,1:21:84.87:91,0,85	1/1:11,0:11:10.99:52,11,0	0/1:37,1:38:99:114,0,388	0/0:28,0:28:84.29:0,84,2415	0/1:29,0:29:90.72:91,0,272	1/1:20,0:20:49.19:214,49,0	0/1:24,0:24:4.07:155,0,4	1/1:30,0:30:19.04:236,19,0	0/1:29,1:30:50.69:186,0,51	0/1:33,0:33:90.26:235,0,90	0/1:39,0:39:99:229,0,107	0/1:16,0:16:34.43:34,0,53	0/1:12,0:12:26.07:26,0,109	0/1:21,0:21:43.12:43,0,89	1/1:31,1:33:61.54:273,62,0	1/1:12,0:12:5.34:22,5,0	1/1:17,1:18:35.72:178,36,0	0/1:21,0:21:30.03:103,0,30	1/1:17,0:17:13.41:66,13,0	0/1:29,0:29:83.49:163,0,83	0/1:36,0:36:99:151,0,203	1/1:35,0:35:60.45:246,60,0	1/1:8,0:8:15.84:65,16,0
chr10	29831818	.	TACTGCAGTGGGA	T	41769.18	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=13.546;DP=676;FS=10.773;HRun=0;HaplotypeScore=267.8211;InbreedingCoeff=0.9636;MQ=77.72;MQ0=0;MQRankSum=-14.927;QD=74.19;ReadPosRankSum=4.874;VQSLOD=3.3679;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,105,6016	1/1:0,15:15:27.09:1025,27,0	0/0:23,0:23:69.24:0,69,3615	0/0:25,0:25:72.25:0,72,3057	1/1:2,19:21:45.15:1591,45,0	1/1:4,17:21:36.12:1367,36,0	1/1:4,7:11:12.04:455,12,0	1/1:7,31:38:95.94:2513,96,0	0/0:28,0:28:81.28:0,81,4602	1/1:4,25:29:66.22:2141,66,0	1/1:0,20:20:57.20:2123,57,0	1/1:1,23:24:54.17:2050,54,0	1/1:1,29:30:72.25:2733,72,0	1/1:4,25:29:60.21:2274,60,0	1/1:3,30:33:72.25:2732,72,0	1/1:3,36:39:81.28:3036,81,0	1/1:1,15:16:21.07:772,21,0	1/1:2,10:12:15.05:570,15,0	1/1:4,17:21:50.96:1088,51,0	1/1:3,30:33:84.29:2943,84,0	1/1:1,11:12:9.03:286,9,0	1/1:2,16:18:39.13:1477,39,0	1/1:2,18:20:36.12:1366,36,0	1/1:3,14:17:15.05:569,15,0	1/1:3,24:27:63.22:2391,63,0	1/1:3,30:34:81.28:2885,81,0	1/1:2,32:35:72.25:2699,72,0	1/1:0,8:8:18.06:683,18,0
chr10	29831822	.	GCAGTGGGA	G	19541.45	PASS	AB=0.985;AC=46;AF=0.821;AN=56;BaseQRankSum=16.270;DP=620;FS=12.856;HRun=0;HaplotypeScore=281.4296;InbreedingCoeff=0.7186;MQ=80.88;MQ0=0;MQRankSum=-16.718;QD=38.32;ReadPosRankSum=8.728;VQSLOD=3.0696;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:99:0,99,4467	1/1:15,0:15:27.09:502,27,0	0/0:25,0:25:75.26:0,75,3161	0/0:24,0:24:69.20:0,69,2315	1/1:19,0:19:36.28:720,36,0	1/1:17,1:18:36.12:669,36,0	1/1:7,0:7:12.04:223,12,0	0/1:31,1:32:99:1010,0,208	0/0:28,0:28:84.27:0,84,3579	1/1:25,0:25:14.58:891,15,0	1/1:20,0:20:57.09:1020,57,0	1/1:23,0:23:54.19:1004,54,0	1/1:29,0:29:72.25:1338,72,0	1/1:25,1:26:60.21:1116,60,0	1/1:30,0:30:72.25:1338,72,0	1/1:36,0:36:81.19:1467,81,0	1/1:15,0:15:21.07:365,21,0	1/1:10,0:10:15.05:279,15,0	0/1:17,0:17:99:351,0,144	1/1:30,1:32:65.89:1323,66,0	1/1:11,0:11:6:112,6,0	1/1:16,1:17:39.13:724,39,0	1/1:18,0:18:36.12:669,36,0	1/1:14,0:14:15.05:279,15,0	1/1:24,0:24:63.22:1171,63,0	1/1:31,0:31:64.25:1331,64,0	1/1:33,0:33:72.22:1305,72,0	1/1:8,0:8:18.06:335,18,0
chr10	29832716	.	AG	A	2677.34	PASS	AB=0.812;AC=18;AF=0.333;AN=54;BaseQRankSum=-10.698;DP=484;FS=3.485;HRun=1;HaplotypeScore=152.1400;InbreedingCoeff=-0.4641;MQ=38.77;MQ0=22;MQRankSum=-6.639;QD=7.92;ReadPosRankSum=-2.930;VQSLOD=-0.0041;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:17:40.02:0,40,574	0/1:6,3:9:43.78:109,0,44	./.	0/0:4,0:2:0.47:0,0,1	0/1:18,3:20:62.87:63,0,187	0/1:20,9:27:99:354,0,396	0/1:7,5:12:99:168,0,165	0/1:13,11:18:96.71:407,0,97	0/0:13,0:13:29.95:0,30,407	0/1:9,7:15:99:275,0,186	0/1:12,7:18:99:141,0,269	0/1:15,4:18:71.11:185,0,71	0/1:23,2:23:19.55:71,0,20	0/1:15,2:16:29.95:124,0,30	0/0:21,0:18:42.14:0,42,617	0/1:12,1:12:28.02:28,0,63	0/0:17,0:16:8.58:0,9,452	0/0:13,0:12:30.08:0,30,427	0/0:21,0:13:29.31:0,29,409	0/0:26,0:26:62.38:0,62,856	0/0:10,0:9:27.04:0,27,370	0/1:16,4:19:57.70:58,0,139	0/1:9,5:13:99:207,0,205	0/1:20,5:22:28.73:163,0,29	0/1:18,6:21:99:132,0,134	0/1:17,5:22:99:241,0,401	0/1:15,1:16:4.56:35,0,5	0/1:11,2:13:39.86:71,0,40
chr10	29832720	.	AGAAAGAAAAAAAGAAAAAAAG	A	14373.14	PASS	AB=1.000;AC=42;AF=0.778;AN=54;BaseQRankSum=-5.959;DP=477;FS=6.815;HRun=0;HaplotypeScore=231.9360;InbreedingCoeff=0.0858;MQ=40.51;MQ0=22;MQRankSum=-4.210;QD=31.52;ReadPosRankSum=-5.620;VQSLOD=1.0913;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:18,0:17:80.46:80,0,478	1/1:10,0:10:18.05:355,18,0	./.	0/0:5,0:3:7.27:0,7,150	1/1:19,0:19:30.05:753,30,0	1/1:24,0:23:58.64:1417,59,0	0/1:13,0:13:55.73:631,0,56	1/1:25,0:20:53.84:833,54,0	0/0:12,0:12:30.99:0,31,1286	1/1:18,0:18:51.05:1169,51,0	1/1:19,0:19:44.96:1009,45,0	1/1:18,0:17:24.05:651,24,0	1/1:5,17:20:9.01:250,9,0	1/1:13,0:13:11.48:267,11,0	0/1:21,0:18:99:190,0,281	1/1:13,0:12:9.50:337,10,0	0/1:16,0:15:99:369,0,208	0/1:13,0:12:99:555,0,122	0/1:19,0:11:99:139,0,366	0/1:26,0:26:99:336,0,934	0/1:9,0:8:63.42:222,0,63	1/1:21,0:20:24.08:779,24,0	1/1:14,0:13:39.09:834,39,0	1/1:10,13:20:20.89:275,21,0	1/1:23,0:20:27.09:929,27,0	1/1:18,0:21:60.18:1399,60,0	1/1:1,15:16:5.57:211,6,0	1/1:17,0:17:12.04:385,12,0
chr10	29832728	.	AAAAAGAAAAAAAG	A	12499.52	PASS	AB=1.000;AC=46;AF=0.821;AN=56;BaseQRankSum=1.261;DP=385;FS=3.566;HRun=0;HaplotypeScore=133.1069;InbreedingCoeff=0.2700;MQ=45.37;MQ0=13;MQRankSum=-0.013;QD=34.72;ReadPosRankSum=2.999;VQSLOD=4.4625;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:18,0:17:99:192,0,114	1/1:0,8:8:11.82:207,12,0	0/0:5,0:1:3.01:0,3,32	0/0:7,0:5:9.92:0,10,219	1/1:1,18:18:30.02:629,30,0	1/1:11,1:12:33.11:902,33,0	0/1:8,0:8:37.68:460,0,38	1/1:17,0:12:33.11:852,33,0	0/0:13,0:13:30.51:0,31,1027	1/1:1,11:11:29.97:768,30,0	1/1:11,1:11:33.11:867,33,0	1/1:1,11:11:9.03:335,9,0	1/1:18,0:17:3.01:113,3,0	1/1:0,11:11:2.86:109,3,0	1/1:17,0:14:34.70:463,35,0	1/1:1,11:11:6.02:221,6,0	1/1:15,0:14:28.85:636,29,0	1/1:13,0:12:5.06:656,5,0	0/1:15,0:11:35.25:260,0,35	0/1:30,0:30:54.92:916,0,55	1/1:8,0:8:4.09:428,4,0	1/1:1,16:16:21.03:586,21,0	1/1:9,2:10:27.09:736,27,0	1/1:16,0:14:3.01:75,3,0	1/1:2,16:16:15.05:562,15,0	1/1:13,1:14:42.14:1185,42,0	1/1:15,0:15:3.01:114,3,0	1/1:2,10:12:6.02:227,6,0
chr10	29832740	.	AG	A	7441.09	PASS	AB=0.529;AC=49;AF=0.875;AN=56;BaseQRankSum=5.079;DP=410;FS=0.851;HRun=1;HaplotypeScore=103.7936;InbreedingCoeff=0.5966;MQ=55.09;MQ0=8;MQRankSum=-2.341;QD=19.53;ReadPosRankSum=3.229;VQSLOD=5.2086;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:16:16.11:105,16,0	1/1:8,0:8:11.77:110,12,0	0/0:8,0:4:11.22:0,11,83	0/0:9,0:7:12.50:0,12,152	1/1:19,0:18:29.94:302,30,0	1/1:3,13:16:45.12:526,45,0	0/1:1,8:9:6.75:218,0,7	1/1:1,28:25:72.14:837,72,0	0/0:12,0:12:29.97:0,30,407	1/1:12,0:11:30.08:376,30,0	1/1:1,11:12:36.09:416,36,0	1/1:12,0:11:9.01:97,9,0	1/1:18,0:17:2.97:20,3,0	1/1:11,0:11:3.01:38,3,0	1/1:3,14:15:36.11:442,36,0	1/1:11,0:11:6.02:75,6,0	1/1:1,20:20:48.01:587,48,0	1/1:3,10:12:12.86:281,13,0	1/1:4,19:19:49.90:542,50,0	1/1:1,25:26:77.90:909,78,0	1/1:2,7:9:22.60:224,23,0	1/1:17,0:16:20.99:235,21,0	1/1:2,9:11:30.08:356,30,0	1/1:13,0:13:3.01:39,3,0	1/1:16,0:16:14.90:121,15,0	1/1:1,15:16:48.08:525,48,0	1/1:15,0:15:2.96:19,3,0	1/1:10,0:10:5.94:41,6,0
chr10	29833471	.	AT	A	451.97	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.837;DP=564;FS=5.029;HRun=10;HaplotypeScore=98.1184;InbreedingCoeff=0.8555;MQ=67.83;MQ0=0;MQRankSum=-1.151;QD=18.08;ReadPosRankSum=0.537;VQSLOD=3.8232;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,23:25:62.98:547,63,0	0/0:9,0:9:24.06:0,24,265	0/0:11,0:9:9.78:0,10,82	0/0:9,0:7:6.02:0,6,66	0/0:37,0:37:87.23:0,87,953	0/0:22,0:22:59.98:0,60,634	0/0:17,0:17:48.12:0,48,522	0/0:31,0:31:78.18:0,78,832	0/0:18,0:18:48.10:0,48,510	0/0:24,0:24:63.17:0,63,694	0/0:19,1:20:45.10:0,45,487	0/0:20,1:21:34.08:0,34,585	0/0:21,0:21:44.35:0,44,514	0/0:20,0:20:41.92:0,42,434	0/0:27,0:27:72.12:0,72,753	0/0:20,0:20:48.12:0,48,522	0/0:19,0:19:45.12:0,45,497	0/0:24,0:24:54.11:0,54,583	0/0:15,0:15:29.97:0,30,307	0/0:15,0:15:42.11:0,42,462	0/0:14,1:15:19.06:0,19,430	0/0:14,0:14:30.08:0,30,331	0/0:21,0:21:57.12:0,57,609	0/0:16,0:16:36.10:0,36,398	0/0:18,1:19:22.07:0,22,462	0/0:23,0:23:48.11:0,48,514	0/0:26,0:25:72.16:0,72,777	0/0:24,1:25:31.11:0,31,570
chr10	29833724	.	C	CAA	4254.94	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=0.292;DP=503;FS=17.231;HRun=22;HaplotypeScore=130.5773;InbreedingCoeff=0.4409;MQ=66.20;MQ0=3;MQRankSum=-1.400;QD=8.86;ReadPosRankSum=-0.764;VQSLOD=0.1486;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:19:28.03:209,28,0	1/1:5,0:7:7.25:58,7,0	1/1:24,0:9:0.45:3,0,0	0/0:13,0:9:1.36:0,1,3	1/1:16,8:27:30.67:264,31,0	1/1:5,7:14:6.01:59,6,0	1/1:15,0:15:20.98:198,21,0	1/1:35,0:34:16.01:251,16,0	0/0:9,0:10:2.79:0,3,13	1/1:20,0:20:13.17:106,13,0	1/1:8,10:20:17.78:135,18,0	1/1:19,0:19:37.14:325,37,0	1/1:21,0:21:26.85:221,27,0	1/1:20,0:21:22.48:267,22,0	1/1:18,0:18:19.25:162,19,0	1/1:25,0:25:33.83:300,34,0	1/1:14,0:14:16.58:120,17,0	1/1:14,0:13:17.97:151,18,0	1/1:13,0:13:12:104,12,0	1/1:7,0:7:6.81:45,7,0	1/1:7,0:7:3:25,3,0	1/1:10,0:10:9.85:80,10,0	1/1:9,1:10:5.67:57,6,0	1/1:9,0:9:9.01:90,9,0	1/1:28,0:27:38.85:319,39,0	1/1:25,0:26:24.46:252,24,0	1/1:33,0:30:44.87:398,45,0	1/1:12,0:20:9.59:59,10,0
chr10	29835081	.	AGAGAGACAGAGG	A	4666.37	PASS	AB=1.000;AC=32;AF=0.615;AN=52;BaseQRankSum=-3.315;DP=618;FS=4.631;HRun=0;HaplotypeScore=177.2432;InbreedingCoeff=-0.0663;MQ=62.36;MQ0=14;MQRankSum=-2.136;QD=10.14;ReadPosRankSum=-1.347;VQSLOD=3.5139;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:20,0:20:25.86:352,0,26	1/1:3,5:8:3.01:110,3,0	0/0:27,0:19:39.81:0,40,817	0/0:45,0:16:36.49:0,36,530	./.	0/1:34,0:34:40.38:40,0,109	1/1:28,0:28:5.53:260,6,0	1/1:21,0:21:52.94:723,53,0	0/0:22,0:22:39.40:0,39,1026	0/1:20,0:20:44.31:575,0,44	0/1:16,0:16:3.80:330,0,4	0/1:21,0:21:98.15:98,0,139	0/1:12,0:12:42.27:42,0,70	1/1:20,0:20:2.16:46,2,0	0/1:23,0:23:30.34:64,0,30	0/1:22,0:22:99:425,0,193	1/1:16,0:16:5.93:41,6,0	1/1:18,0:18:12.82:129,13,0	1/1:25,0:25:35.31:469,35,0	1/1:15,0:15:3.01:37,3,0	1/1:24,0:21:3.48:50,3,0	0/1:17,0:16:37.90:38,0,100	./.	0/0:22,0:20:8.80:0,9,222	1/1:20,0:20:5.57:145,6,0	0/1:35,0:34:99:592,0,560	0/1:35,0:34:2.99:3,0,155	0/1:10,0:10:97.01:97,0,138
chr10	29835083	.	AGAGACAGAGG	A	5879.99	PASS	AB=1.000;AC=35;AF=0.673;AN=52;BaseQRankSum=-2.451;DP=615;FS=0.000;HRun=0;HaplotypeScore=162.4520;InbreedingCoeff=0.1359;MQ=62.77;MQ0=13;MQRankSum=-1.596;QD=12.84;ReadPosRankSum=-0.140;VQSLOD=3.7791;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:20:29.67:495,30,0	1/1:8,0:8:3.01:78,3,0	0/0:27,0:19:39.63:0,40,817	0/0:45,0:16:34.92:0,35,525	./.	0/1:35,0:35:55.28:85,0,55	1/1:26,0:26:29.19:356,29,0	1/1:23,0:23:60.97:830,61,0	0/0:21,0:21:41.47:0,41,980	1/1:20,0:20:18.02:618,18,0	1/1:16,0:16:19.69:383,20,0	0/1:21,0:21:50.27:96,0,50	0/1:12,0:12:42.27:42,0,46	1/1:20,0:20:5.33:70,5,0	0/1:23,0:23:2.22:163,0,2	0/1:21,0:21:91.09:467,0,91	1/1:16,0:16:6.02:90,6,0	1/1:18,0:18:14.99:159,15,0	1/1:24,0:24:66.45:768,66,0	1/1:1,16:17:3.01:37,3,0	1/1:23,0:20:6.01:74,6,0	0/1:17,0:16:28.97:77,0,29	./.	0/0:22,0:20:8.96:0,9,146	1/1:19,0:19:11.97:168,12,0	0/1:34,0:34:99:650,0,149	0/1:35,0:34:36.40:36,0,67	0/1:10,0:10:50.23:135,0,50
chr10	29835085	.	AGACAGAGG	A	7440	PASS	AB=1.000;AC=42;AF=0.808;AN=52;BaseQRankSum=-0.368;DP=616;FS=4.161;HRun=0;HaplotypeScore=148.0968;InbreedingCoeff=0.5310;MQ=64.67;MQ0=13;MQRankSum=-2.445;QD=16.24;ReadPosRankSum=0.301;VQSLOD=3.7516;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:19:41.93:548,42,0	1/1:8,0:8:3.01:64,3,0	0/0:29,0:21:45.65:0,46,929	0/0:45,0:16:31.99:0,32,519	./.	0/1:34,0:34:26.67:106,0,27	1/1:24,0:24:30.01:423,30,0	1/1:24,0:24:68.32:906,68,0	0/0:22,0:22:44.74:0,45,906	1/1:22,0:22:52.39:740,52,0	1/1:17,0:17:30.02:455,30,0	1/1:20,0:20:17.81:212,18,0	0/1:11,0:11:20.90:42,0,21	1/1:19,0:19:5.32:70,5,0	1/1:3,20:23:14.92:356,15,0	1/1:21,0:21:16.64:508,17,0	1/1:1,15:16:6.02:171,6,0	1/1:18,0:18:15:169,15,0	1/1:2,22:24:69.45:860,69,0	1/1:17,0:17:3.01:37,3,0	1/1:25,0:22:6.01:74,6,0	1/1:17,0:16:3.06:131,3,0	./.	0/0:22,0:20:8.72:0,9,70	1/1:19,0:19:14.77:249,15,0	1/1:35,0:35:75.15:1069,75,0	1/1:35,0:34:0.39:42,0,0	1/1:10,0:10:18.35:205,18,0
chr10	29835086	.	GAC	G	4075.25	PASS	AC=46;AF=0.885;AN=52;BaseQRankSum=4.874;DP=618;FS=2.057;HRun=0;HaplotypeScore=126.2540;InbreedingCoeff=0.6910;MQ=65.35;MQ0=13;MQRankSum=-4.203;QD=8.49;ReadPosRankSum=3.085;VQSLOD=3.6349;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:18:28.49:261,28,0	1/1:8,0:8:2.88:15,3,0	0/0:29,0:22:34.61:0,35,421	0/0:45,0:16:28.79:0,29,286	./.	1/1:34,0:34:8.56:70,9,0	1/1:21,3:24:26.83:204,27,0	1/1:25,0:25:55.96:394,56,0	0/0:23,0:23:44.24:0,44,383	1/1:22,0:22:44.38:347,44,0	1/1:16,1:17:29.91:238,30,0	1/1:19,1:20:21.97:154,22,0	1/1:0,11:11:6:66,6,0	1/1:19,0:19:2.99:24,3,0	1/1:23,0:23:14.62:85,15,0	1/1:21,1:22:44.46:329,44,0	1/1:16,0:16:5.85:34,6,0	1/1:18,0:18:12.36:85,12,0	1/1:24,0:24:55.62:397,56,0	1/1:17,0:17:2.94:18,3,0	1/1:25,0:22:3.46:25,3,0	1/1:17,0:16:14.79:119,15,0	./.	1/1:4,18:20:9.03:129,9,0	1/1:18,0:18:14.49:120,14,0	1/1:35,0:35:99:719,99,0	1/1:34,1:34:19.14:99,19,0	1/1:10,0:10:22.55:143,23,0
chr10	29835089	.	AGAGG	A	7468.46	PASS	AB=1.000;AC=45;AF=0.865;AN=52;BaseQRankSum=3.936;DP=615;FS=1.988;HRun=0;HaplotypeScore=122.7388;InbreedingCoeff=0.5691;MQ=67.00;MQ0=10;MQRankSum=-4.101;QD=15.69;ReadPosRankSum=2.392;VQSLOD=4.3736;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:20:11.61:200,12,0	1/1:5,0:5:3:29,3,0	0/0:31,0:23:47.28:0,47,1379	0/0:46,0:16:28.86:0,29,634	./.	1/1:4,34:38:2.51:48,3,0	1/1:27,0:27:36:452,36,0	1/1:0,24:24:69.16:941,69,0	0/0:22,0:22:48.46:0,48,1108	1/1:1,21:22:58.36:783,58,0	1/1:16,0:16:33.10:502,33,0	0/1:18,0:18:2.52:256,0,3	1/1:11,0:11:5.91:64,6,0	1/1:3,18:21:2.67:47,3,0	1/1:21,0:21:15.04:177,15,0	1/1:19,2:21:45.14:707,45,0	1/1:16,0:16:6.02:80,6,0	1/1:4,15:19:8.99:108,9,0	1/1:23,0:23:50.98:642,51,0	1/1:16,0:16:3.01:37,3,0	1/1:4,20:22:3.01:49,3,0	1/1:16,0:15:12.01:148,12,0	./.	1/1:19,1:20:8.47:56,8,0	1/1:16,0:16:14.61:250,15,0	1/1:37,0:37:99:1494,109,0	1/1:4,31:34:9.50:169,10,0	1/1:10,0:10:23.82:229,24,0
chr10	29837013	.	GTTTTTTGGGTTTTTTTTTTTTGTTTTTTTTGT	G	2941.64	PASS	AB=1.000;AC=28;AF=0.500;AN=56;BaseQRankSum=-9.097;DP=420;FS=3.402;HRun=0;HaplotypeScore=330.4995;InbreedingCoeff=-0.2047;MQ=62.20;MQ0=17;MQRankSum=-1.380;QD=10.04;ReadPosRankSum=1.230;VQSLOD=1.8604;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:10,0:10:43.69:44,0,442	0/0:9,0:9:24.08:0,24,1516	0/0:47,0:18:31.24:0,31,698	0/0:46,0:15:27.70:0,28,538	0/1:28,0:28:99:134,0,3086	0/1:15,0:15:35.38:35,0,2378	0/1:14,0:14:17.68:18,0,1493	0/1:20,0:19:99:118,0,866	0/0:10,0:10:27.09:0,27,2721	0/0:8,0:8:7.76:0,8,543	0/1:19,0:19:55.80:56,0,2191	0/1:10,0:10:26.45:26,0,415	0/1:12,0:12:8.66:9,0,1701	0/1:6,0:6:26.71:27,0,704	1/1:3,7:10:9.03:743,9,0	0/1:16,0:16:41.04:41,0,2111	1/1:12,0:12:15.05:188,15,0	1/1:4,8:12:3.48:249,3,0	1/1:7,0:7:18.06:242,18,0	1/1:3,13:16:16.29:641,16,0	1/1:0,4:4:3.01:125,3,0	0/1:9,0:9:31.85:32,0,160	0/1:8,0:7:22.78:23,0,1273	0/0:7,0:7:15.94:0,16,908	0/1:11,0:11:57.29:57,0,1635	0/1:19,0:18:40.20:40,0,1537	0/1:22,0:21:34.52:35,0,2206	0/1:13,0:13:99:235,0,1172
chr10	29837019	.	TGG	T	6842.28	PASS	AC=48;AF=0.889;AN=54;BaseQRankSum=0.855;DP=417;FS=1.677;HRun=3;HaplotypeScore=112.3977;InbreedingCoeff=0.8261;MQ=59.45;MQ0=31;MQRankSum=-1.059;QD=23.76;ReadPosRankSum=1.533;VQSLOD=3.3307;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,3:7:12.88:138,13,0	1/1:1,3:8:23.88:250,24,0	0/0:55,0:15:14.39:0,14,245	0/0:59,0:16:13.67:0,14,154	1/1:12,12:26:55.94:639,56,0	1/1:3,10:15:41.86:481,42,0	1/1:1,11:13:21.07:285,21,0	1/1:5,7:17:32.05:340,32,0	0/0:10,0:10:27.09:0,27,437	1/1:5,0:7:10.40:84,10,0	1/1:6,12:19:53.95:580,54,0	1/1:2,4:8:8.96:85,9,0	1/1:1,6:10:30.05:365,30,0	1/1:2,2:5:12.01:145,12,0	1/1:8,0:8:8.97:69,9,0	1/1:5,7:14:37.06:401,37,0	1/1:1,9:10:15.05:188,15,0	1/1:10,0:10:3.46:24,3,0	1/1:4,6:8:18.06:242,18,0	1/1:13,0:13:15.48:157,15,0	./.	1/1:3,5:8:8.92:91,9,0	1/1:3,4:7:21.06:251,21,0	1/1:1,5:7:14.94:164,15,0	1/1:3,6:10:30.05:390,30,0	1/1:7,11:17:37.59:438,38,0	1/1:5,7:17:46.84:566,47,0	1/1:9,2:13:36.98:469,37,0
chr10	29837020	.	G	GT	1470.11	PASS	AB=0.980;AC=32;AF=0.593;AN=54;BaseQRankSum=2.218;DP=399;FS=0.634;HRun=6;HaplotypeScore=121.9215;InbreedingCoeff=0.5203;MQ=59.95;MQ0=31;MQRankSum=-1.320;QD=7.10;ReadPosRankSum=0.998;VQSLOD=0.1920;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:6,0:6:6.60:21,0,7	1/1:7,1:8:13.23:128,13,0	0/0:56,0:15:12.71:0,13,161	0/0:63,0:17:5.06:0,5,132	0/1:23,1:24:9.58:109,0,10	1/1:16,0:15:14.31:191,14,0	1/1:13,0:13:14.56:73,15,0	1/1:16,0:15:9.84:114,10,0	0/0:10,0:10:26.14:0,26,221	0/0:5,0:5:1.89:0,2,14	1/1:18,0:18:34.01:215,34,0	0/0:7,0:7:1.93:0,2,5	1/1:10,0:10:16.98:88,17,0	1/1:5,0:4:0.01:4,0,0	0/0:7,0:7:6.66:0,7,20	1/1:10,3:13:5.73:114,6,0	0/0:9,0:9:2.13:0,2,5	0/0:9,0:9:2.15:0,2,7	0/0:9,0:7:0.68:0,1,2	0/0:13,0:13:7.40:0,7,20	./.	1/1:5,0:5:0.67:4,1,0	1/1:8,0:7:12.75:73,13,0	1/1:6,1:7:8.03:40,8,0	1/1:11,0:10:12.25:72,12,0	1/1:17,0:14:3.43:123,3,0	1/1:17,0:16:10.01:119,10,0	1/1:12,1:13:6.16:143,6,0
chr10	29837034	.	TG	T	3140.57	PASS	AB=1.000;AC=47;AF=0.904;AN=52;BaseQRankSum=3.106;DP=425;FS=2.690;HRun=1;HaplotypeScore=122.0405;InbreedingCoeff=0.5290;MQ=51.39;MQ0=32;MQRankSum=-0.867;QD=8.87;ReadPosRankSum=1.912;VQSLOD=1.3879;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:6,0:6:3.36:15,0,3	1/1:7,2:9:16.51:111,17,0	1/1:53,3:12:3.63:37,4,0	0/0:55,0:14:9.41:0,9,83	1/1:23,2:25:24.98:331,25,0	1/1:17,2:18:37.76:190,38,0	1/1:11,3:14:25.81:182,26,0	1/1:22,0:21:35.20:244,35,0	0/0:11,0:11:8.95:0,9,113	1/1:18,0:18:7.53:113,8,0	1/1:18,3:21:56.80:341,57,0	1/1:6,1:7:13.06:58,13,0	1/1:9,1:10:29.27:190,29,0	1/1:7,0:6:13.98:75,14,0	1/1:8,0:7:7.49:28,7,0	1/1:10,1:11:20.67:136,21,0	./.	1/1:8,0:8:2.50:9,2,0	./.	1/1:14,0:13:4.99:19,5,0	1/1:4,0:4:0.47:1,0,0	1/1:4,1:5:5.26:27,5,0	1/1:9,2:10:26.39:170,26,0	1/1:9,0:9:13.32:82,13,0	1/1:14,1:14:37.74:217,38,0	1/1:22,2:20:51.31:321,51,0	1/1:23,0:21:28.06:257,28,0	1/1:8,0:8:7.16:104,7,0
chr10	29837038	.	T	TG	110.48	PASS	AB=0.931;AC=14;AF=0.269;AN=52;BaseQRankSum=2.636;DP=430;FS=47.636;HRun=0;HaplotypeScore=138.0839;InbreedingCoeff=-0.2872;MQ=49.91;MQ0=33;MQRankSum=-1.254;QD=0.65;ReadPosRankSum=1.885;VQSLOD=0.5835;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:7:10.43:0,10,86	0/1:8,1:9:19.18:19,0,24	0/0:52,0:8:5.59:0,6,55	0/0:57,0:17:20.59:0,21,142	0/0:25,1:26:16.59:0,17,216	0/1:20,1:20:10.82:11,0,82	0/1:13,1:14:9.61:10,0,41	0/0:22,0:21:1.17:0,1,127	0/0:11,0:11:29.60:0,30,314	0/1:18,0:18:31.78:32,0,60	0/1:22,0:22:30.19:30,0,95	0/1:7,0:7:0.38:0,0,61	0/1:8,2:10:15.02:15,0,49	0/1:5,2:6:2.58:3,0,49	0/0:8,0:7:6.66:0,7,21	0/0:10,1:11:5.42:0,5,83	./.	0/0:8,0:8:2.22:0,2,7	./.	0/0:14,0:13:4.44:0,4,14	1/1:4,0:4:0.89:2,1,0	0/0:4,0:4:5.91:0,6,38	0/1:11,0:10:22.66:23,0,44	0/0:9,0:9:6.92:0,7,58	0/1:13,2:14:49.40:53,0,49	0/0:22,1:18:6.65:0,7,133	0/1:22,3:23:23.08:23,0,98	0/1:7,0:7:19.44:19,0,41
chr10	29837041	.	TTTG	T	4904.07	PASS	AB=0.920;AC=44;AF=0.846;AN=52;BaseQRankSum=2.055;DP=432;FS=2.786;HRun=0;HaplotypeScore=130.8949;InbreedingCoeff=0.3247;MQ=47.55;MQ0=33;MQRankSum=-1.534;QD=13.47;ReadPosRankSum=-0.081;VQSLOD=4.7915;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:7,0:7:17.79:59,0,18	1/1:8,1:9:23.71:220,24,0	0/0:53,0:6:6.24:0,6,46	0/1:55,0:15:6.09:6,0,51	1/1:26,0:26:64:457,64,0	1/1:20,2:21:35.05:429,35,0	1/1:11,3:14:24.31:228,24,0	0/1:19,3:21:20.90:332,0,21	0/0:11,0:11:27.01:0,27,451	0/1:15,5:20:12.11:404,0,12	1/1:18,2:20:52.60:443,53,0	1/1:6,1:7:8.54:71,9,0	1/1:9,0:9:26.21:224,26,0	1/1:7,0:6:16.19:119,16,0	1/1:8,0:7:8.93:64,9,0	1/1:10,0:10:20.51:181,21,0	./.	1/1:8,0:8:2.98:21,3,0	./.	1/1:14,0:13:6.42:44,6,0	1/1:4,0:4:0.47:1,0,0	1/1:3,1:4:5.78:32,6,0	1/1:9,2:10:29.11:266,29,0	1/1:8,1:9:11.27:90,11,0	1/1:13,2:14:28.78:357,29,0	1/1:22,2:19:6.60:314,7,0	1/1:27,1:26:36.26:357,36,0	1/1:11,0:11:21.25:184,21,0
chr10	29837043	.	TG	T	4121.24	PASS	AB=0.973;AC=46;AF=0.885;AN=52;BaseQRankSum=2.950;DP=417;FS=10.743;HRun=1;HaplotypeScore=117.7457;InbreedingCoeff=0.3858;MQ=44.94;MQ0=32;MQRankSum=-0.442;QD=10.33;ReadPosRankSum=0.445;VQSLOD=0.5612;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:6,0:6:4.09:41,0,4	1/1:8,0:8:23.52:155,24,0	1/1:48,1:6:1.39:11,1,0	0/1:49,3:12:9.32:9,0,42	1/1:22,3:25:68.82:456,69,0	1/1:21,0:20:30.08:262,30,0	1/1:14,0:14:26.74:203,27,0	1/1:19,1:19:6.28:267,6,0	0/0:10,0:10:26.61:0,27,253	1/1:20,1:21:26.43:291,26,0	1/1:18,2:20:54.90:417,55,0	1/1:7,0:7:13.68:73,14,0	1/1:9,0:9:26.67:191,27,0	1/1:7,0:6:17.37:107,17,0	1/1:9,0:8:7.11:25,7,0	1/1:9,0:9:26.65:181,27,0	./.	1/1:8,0:8:2.37:8,2,0	./.	1/1:15,0:14:4.74:17,5,0	0/0:4,0:4:0:0,0,0	1/1:4,0:4:5.97:45,6,0	1/1:10,1:10:29.51:205,30,0	1/1:8,0:8:10.74:78,11,0	1/1:15,0:14:34.24:226,34,0	1/1:23,1:19:32.39:329,32,0	1/1:26,1:25:52.68:357,53,0	1/1:9,0:9:20.92:169,21,0
chr10	29837052	.	GT	G	1644.36	PASS	AB=0.804;AC=36;AF=0.643;AN=56;BaseQRankSum=3.565;DP=423;FS=27.687;HRun=12;HaplotypeScore=119.5984;InbreedingCoeff=0.5321;MQ=52.85;MQ0=21;MQRankSum=0.664;QD=6.32;ReadPosRankSum=1.635;VQSLOD=0.3239;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:2,2:5:8.49:38,0,8	1/1:7,1:8:5.84:40,6,0	0/0:48,0:9:1.98:0,2,39	0/0:43,0:12:5.48:0,5,15	1/1:15,8:23:3.41:100,3,0	1/1:11,8:19:8.75:71,9,0	1/1:10,3:13:5.73:64,6,0	1/1:9,8:17:2.19:158,2,0	0/0:4,0:9:20.17:0,20,116	1/1:9,14:23:13.69:263,14,0	1/1:10,8:18:23.33:174,23,0	1/1:5,2:8:6.34:51,6,0	1/1:6,3:9:8.01:67,8,0	1/1:7,2:8:11.93:91,12,0	0/0:13,0:12:19.94:0,20,131	1/1:4,4:8:11.59:88,12,0	0/1:8,0:8:2.09:2,0,151	0/0:10,0:11:11.26:0,11,75	0/0:10,0:8:24.05:0,24,240	0/0:21,0:21:25.94:0,26,224	0/0:6,0:6:8.93:0,9,74	0/1:6,1:7:15.58:37,0,16	1/1:5,5:11:15.73:100,16,0	1/1:5,1:6:5.76:45,6,0	0/1:9,5:15:0.20:90,0,0	1/1:17,2:17:3.73:120,4,0	1/1:8,16:22:20.13:159,20,0	1/1:3,6:9:8.74:69,9,0
chr10	29837069	.	AAG	A	80.15	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=1.330;DP=319;FS=3.631;HRun=0;HaplotypeScore=93.7548;InbreedingCoeff=0.7139;MQ=70.76;MQ0=4;MQRankSum=-3.042;QD=11.45;ReadPosRankSum=0.808;VQSLOD=2.9929;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,6:7:14.96:168,15,0	0/0:3,0:3:9.03:0,9,163	0/0:34,0:14:26.96:0,27,332	0/0:21,0:12:19.76:0,20,200	0/0:14,0:14:36.12:0,36,642	0/0:12,0:12:21.07:0,21,366	0/0:9,0:9:17.05:0,17,230	0/0:19,0:19:54.18:0,54,949	0/0:7,0:7:17.99:0,18,274	0/0:20,0:20:59.99:0,60,1031	0/0:14,0:14:42.14:0,42,723	0/0:8,0:8:21.06:0,21,347	0/0:6,0:6:15.05:0,15,273	0/0:6,0:6:18.06:0,18,309	0/0:13,0:13:33.21:0,33,630	0/0:5,0:5:11.99:0,12,183	0/0:11,0:11:30.10:0,30,526	0/0:5,0:5:6.02:0,6,109	0/0:12,0:12:33.10:0,33,554	0/0:14,0:14:39.13:0,39,709	0/0:3,0:3:9.03:0,9,164	0/0:8,0:8:18.06:0,18,304	0/0:9,0:9:21.07:0,21,382	0/0:5,0:5:11.95:0,12,157	0/0:11,0:11:27.09:0,27,475	0/0:10,0:9:27.08:0,27,437	0/0:15,0:14:18.06:0,18,308	0/0:18,0:18:48.07:0,48,702
chr10	29837713	.	GA	G	1502.30	PASS	AB=0.748;AC=32;AF=0.571;AN=56;BaseQRankSum=5.266;DP=665;FS=2.518;HRun=17;HaplotypeScore=90.8287;InbreedingCoeff=0.2761;MQ=69.04;MQ0=26;MQRankSum=-1.142;QD=3.66;ReadPosRankSum=4.108;VQSLOD=0.6007;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,1:23:24.11:85,24,0	0/1:3,4:7:12.10:37,0,12	0/0:85,0:23:22.76:0,23,112	0/0:73,1:30:28.13:0,28,154	0/1:8,10:21:53.69:112,0,54	0/0:10,1:14:10.03:0,10,165	0/1:17,1:19:15.80:16,0,207	1/1:18,4:25:24.11:126,24,0	1/1:2,1:12:17.34:58,17,0	0/1:15,10:25:72.13:121,0,72	0/1:13,12:25:34.92:118,0,35	0/0:16,3:19:14.89:0,15,194	0/1:18,2:20:5.32:5,0,228	0/1:11,1:12:1.84:2,0,76	1/1:4,0:19:26.40:74,26,0	0/1:8,13:22:28.09:117,0,28	1/1:6,0:23:30.28:85,30,0	1/1:2,0:14:22.12:63,22,0	1/1:8,1:19:28.67:88,29,0	1/1:3,0:14:22.85:68,23,0	1/1:8,0:19:10.06:28,10,0	0/0:21,0:21:21.85:0,22,180	0/0:19,4:23:1.86:0,2,214	0/0:17,0:16:10.29:0,10,167	1/1:3,10:15:8.29:92,8,0	0/1:8,11:23:0.31:132,0,0	0/1:18,3:19:72.59:91,0,73	1/1:11,12:29:4.96:169,5,0
chr10	29837903	.	TAA	T	6571.93	PASS	AB=0.698;AC=49;AF=0.875;AN=56;BaseQRankSum=-8.291;DP=541;FS=1.777;HRun=15;HaplotypeScore=86.5632;InbreedingCoeff=0.5442;MQ=86.69;MQ0=5;MQRankSum=-1.403;QD=13.84;ReadPosRankSum=3.191;VQSLOD=4.3200;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:4,2:24:7.27:7,0,74	1/1:1,2:4:5.71:38,6,0	0/0:54,1:34:41.25:0,41,410	0/1:42,0:24:10.89:11,0,131	1/1:5,14:20:35.81:317,36,0	1/1:4,14:19:23.77:256,24,0	1/1:9,11:22:26.26:267,26,0	1/1:11,14:26:20.24:330,20,0	0/0:3,0:11:17.98:0,18,93	1/1:4,13:18:38.36:314,38,0	1/1:3,10:15:25.32:223,25,0	1/1:1,10:11:14.71:132,15,0	1/1:3,13:16:26.95:238,27,0	1/1:3,11:15:29.69:249,30,0	1/1:1,11:14:26.70:268,27,0	1/1:4,15:20:41.71:355,42,0	1/1:7,20:29:50.19:456,50,0	1/1:3,19:22:41.82:370,42,0	1/1:5,10:17:7.61:266,8,0	1/1:4,13:18:20.35:331,20,0	1/1:5,6:11:12.14:150,12,0	1/1:5,8:14:23.66:198,24,0	1/1:2,13:17:31.56:294,32,0	1/1:2,15:19:29.77:353,30,0	1/1:6,4:11:23.07:177,23,0	1/1:3,18:22:53.63:461,54,0	1/1:4,12:17:35.67:302,36,0	0/1:2,9:11:2.34:208,0,2
chr10	29839314	.	CGG	C	5743.98	PASS	AC=48;AF=0.889;AN=54;BaseQRankSum=-5.587;DP=302;FS=7.398;HRun=10;HaplotypeScore=43.2859;InbreedingCoeff=0.7893;MQ=81.60;MQ0=1;MQRankSum=-1.184;QD=22.09;ReadPosRankSum=3.376;VQSLOD=3.1089;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,12:13:27.07:301,27,0	1/1:1,6:7:15.04:167,15,0	0/0:16,0:11:12.54:0,13,113	0/0:16,0:12:4.78:0,5,98	1/1:1,11:12:30.06:333,30,0	1/1:0,10:10:21.06:234,21,0	1/1:2,11:13:30.07:334,30,0	1/1:3,5:8:14.84:138,15,0	0/0:2,0:9:14.97:0,15,52	1/1:4,3:7:9.01:100,9,0	1/1:0,4:4:9.02:100,9,0	1/1:9,7:16:12:134,12,0	1/1:2,10:12:22.67:265,23,0	1/1:3,8:11:21.05:234,21,0	1/1:0,9:9:24.06:267,24,0	1/1:4,4:8:6:67,6,0	1/1:3,18:20:48.13:535,48,0	1/1:1,11:12:30.08:334,30,0	1/1:3,4:7:9:99,9,0	1/1:1,5:6:12.03:134,12,0	1/1:3,11:14:24.06:267,24,0	1/1:0,11:11:33.09:367,33,0	1/1:0,4:4:9.02:100,9,0	1/1:3,8:11:21.05:234,21,0	1/1:1,11:12:21.03:234,21,0	1/1:2,12:14:27.05:299,27,0	1/1:1,17:18:41.78:467,42,0	./.
chr10	29840628	.	AAG	A	2819.24	PASS	AB=0.983;AC=48;AF=0.857;AN=56;BaseQRankSum=5.888;DP=463;FS=10.769;HRun=0;HaplotypeScore=201.6172;InbreedingCoeff=-0.1292;MQ=62.31;MQ0=3;MQRankSum=-4.569;QD=6.09;ReadPosRankSum=4.772;VQSLOD=2.2828;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:17,0:17:8.49:8,0,195	0/1:8,1:9:7.61:67,0,8	0/1:20,0:13:8.35:8,0,209	0/1:14,0:10:24.02:24,0,116	1/1:23,2:25:22.31:211,22,0	0/1:25,1:26:23.55:133,0,24	0/1:14,0:14:11.02:51,0,11	1/1:28,2:30:61.30:317,61,0	1/1:14,0:14:26.36:117,26,0	1/1:15,1:16:7.72:85,8,0	1/1:20,0:20:14.95:88,15,0	1/1:16,0:16:17.90:116,18,0	1/1:12,0:12:12.78:92,13,0	1/1:16,0:16:28.72:129,29,0	1/1:20,0:20:29.44:89,29,0	1/1:22,0:22:19.34:151,19,0	1/1:15,3:18:10:149,10,0	1/1:17,1:18:4.06:132,4,0	1/1:19,1:20:4.56:175,5,0	1/1:25,1:26:21.70:185,22,0	1/1:5,0:5:8.13:31,8,0	1/1:3,0:3:6.31:27,6,0	1/1:8,1:9:12.69:80,13,0	0/1:6,0:6:14.03:19,0,14	1/1:13,0:13:21.02:56,21,0	1/1:18,2:20:35.07:221,35,0	1/1:25,1:26:44.19:154,44,0	0/1:8,0:8:27.46:40,0,27
chr10	29840629	.	AG	A	11882.97	PASS	AB=0.963;AC=53;AF=0.946;AN=56;BaseQRankSum=-0.211;DP=454;FS=17.807;HRun=3;HaplotypeScore=161.9548;InbreedingCoeff=-0.0614;MQ=62.36;MQ0=3;MQRankSum=-2.952;QD=26.17;ReadPosRankSum=0.486;VQSLOD=2.8110;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:14,2:16:52.52:92,0,53	1/1:2,7:9:14.18:241,14,0	0/1:20,0:13:24.74:25,0,101	0/1:14,0:10:42.93:43,0,81	1/1:5,20:25:65.74:668,66,0	1/1:7,17:24:62.87:661,63,0	1/1:4,10:14:33.09:393,33,0	1/1:8,22:30:86.84:924,87,0	1/1:4,10:14:38.93:404,39,0	1/1:4,10:14:38.46:402,38,0	1/1:4,15:20:53.78:530,54,0	1/1:6,10:16:47.92:486,48,0	1/1:4,8:12:35.88:345,36,0	1/1:2,14:16:44.97:489,45,0	1/1:1,19:20:54.06:619,54,0	1/1:4,17:21:59.95:642,60,0	1/1:5,13:18:39.07:498,39,0	1/1:4,14:18:50.10:555,50,0	1/1:5,14:19:56.91:556,57,0	1/1:6,20:26:74.75:756,75,0	1/1:1,4:5:11.97:127,12,0	1/1:1,2:3:8.96:91,9,0	1/1:3,6:9:23.85:234,24,0	1/1:2,4:6:8.97:92,9,0	1/1:0,13:13:36.11:440,36,0	1/1:6,14:20:56.83:576,57,0	1/1:3,23:26:69.14:806,69,0	1/1:2,4:6:17.97:187,18,0
chr10	29840941	.	A	AT	667.13	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=-6.108;DP=547;FS=0.000;HRun=8;HaplotypeScore=52.4048;InbreedingCoeff=0.8614;MQ=64.62;MQ0=0;MQRankSum=0.523;QD=24.71;ReadPosRankSum=1.512;VQSLOD=4.2682;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,23:24:66.20:762,66,0	0/0:12,0:12:27:0,27,247	0/0:6,0:6:14.99:0,15,130	0/1:3,0:3:0:0,0,0	0/0:42,0:42:99:0,99,904	0/0:25,0:25:60.02:0,60,549	0/0:10,0:10:24.01:0,24,220	0/0:45,0:45:99:0,102,926	0/0:12,0:12:30:0,30,271	0/0:34,0:34:96.05:0,96,878	0/0:24,0:24:66.01:0,66,598	0/0:12,0:12:16.94:0,17,283	0/0:21,0:21:54.02:0,54,494	0/0:19,0:19:57.02:0,57,517	0/0:15,0:15:45.02:0,45,412	0/0:17,0:17:51.01:0,51,462	0/0:28,0:28:74.94:0,75,676	0/0:14,0:14:36.01:0,36,329	0/0:14,0:14:42.02:0,42,384	0/0:24,0:24:63.02:0,63,576	0/0:13,0:13:36.01:0,36,329	0/0:13,0:13:39.02:0,39,357	0/0:22,0:22:63.03:0,63,576	0/0:7,0:7:21.01:0,21,192	0/0:21,0:21:57.03:0,57,522	0/0:20,0:20:60.03:0,60,549	0/0:33,0:34:95.07:0,95,852	0/0:16,0:16:48.03:0,48,439
chr10	29842697	.	GTA	G	6206.07	PASS	AB=1.000;AC=49;AF=0.942;AN=52;BaseQRankSum=-3.521;DP=485;FS=3.845;HRun=0;HaplotypeScore=75.8221;InbreedingCoeff=-0.0650;MQ=47.94;MQ0=32;MQRankSum=2.358;QD=12.90;ReadPosRankSum=-2.932;VQSLOD=3.8637;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:42,0:38:62.80:498,63,0	1/1:6,0:5:8.93:66,9,0	./.	./.	1/1:19,0:18:35.79:289,36,0	1/1:18,0:17:35.78:295,36,0	1/1:25,0:22:29.32:236,29,0	1/1:13,0:11:29.61:195,30,0	0/1:19,0:17:99:126,0,108	1/1:15,0:14:37.78:317,38,0	1/1:11,0:11:20.82:163,21,0	1/1:19,0:19:38.79:298,39,0	1/1:8,0:6:14.96:119,15,0	1/1:22,0:21:29.90:235,30,0	1/1:19,0:18:4.70:179,5,0	1/1:13,0:12:26.69:213,27,0	1/1:24,0:23:47.73:393,48,0	0/1:12,0:11:3.65:75,0,4	0/1:13,0:11:54.91:77,0,55	1/1:18,0:17:18.44:188,18,0	1/1:38,0:30:29.65:215,30,0	1/1:12,0:11:29.93:241,30,0	1/1:15,0:14:26.94:218,27,0	1/1:35,0:33:68.65:551,69,0	1/1:20,0:19:47.86:385,48,0	1/1:2,13:15:17.93:150,18,0	1/1:21,0:21:47.59:366,48,0	1/1:9,0:6:14.96:120,15,0
chr10	29844367	.	G	GA	419.61	PASS	AB=0.744;AC=2;AF=0.036;AN=56;BaseQRankSum=-2.491;DP=678;FS=0.000;HRun=12;HaplotypeScore=107.6475;InbreedingCoeff=0.0070;MQ=71.26;MQ0=0;MQRankSum=0.207;QD=6.99;ReadPosRankSum=-2.833;VQSLOD=1.9576;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:11,26:40:11.98:493,0,12	0/0:8,0:9:16.89:0,17,115	0/0:16,0:17:6.74:0,7,142	0/0:12,0:13:14.75:0,15,135	0/0:30,2:32:12.74:0,13,408	0/1:18,2:20:5.60:6,0,281	0/0:28,3:32:32.35:0,32,391	0/0:32,1:33:30.37:0,30,386	0/0:23,0:24:17.46:0,17,281	0/0:21,1:23:14.54:0,15,261	0/0:21,1:22:12.53:0,13,255	0/0:30,1:33:43.33:0,43,464	0/0:17,2:19:9.52:0,10,232	0/0:25,0:25:28.68:0,29,347	0/0:22,0:22:47.63:0,48,345	0/0:24,0:25:37.75:0,38,360	0/0:21,2:23:21.50:0,22,321	0/0:16,0:16:35.74:0,36,263	0/0:22,0:22:38.56:0,39,280	0/0:25,0:29:50.72:0,51,346	0/0:24,0:24:53.62:0,54,394	0/0:22,1:24:17.52:0,18,283	0/0:18,0:19:37.77:0,38,267	0/0:29,0:32:77.63:0,78,543	0/0:18,2:21:14.56:0,15,261	0/0:29,2:31:18.45:0,18,299	0/0:30,1:31:56.50:0,56,413	0/0:17,0:17:29.73:0,30,219
chr10	29846348	.	TCTCTGGACCCTTTGAC	T	1718.97	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.635;DP=757;FS=0.960;HRun=0;HaplotypeScore=317.8142;InbreedingCoeff=0.9998;MQ=81.20;MQ0=0;MQRankSum=-6.770;QD=74.74;ReadPosRankSum=-2.859;VQSLOD=2.3112;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,17:23:47.72:1814,48,0	0/0:14,0:14:36.12:0,36,2548	0/0:28,0:28:75.26:0,75,4294	0/0:17,0:17:45.52:0,46,2157	0/0:31,0:31:93.32:0,93,6841	0/0:29,0:29:84.27:0,84,6115	0/0:25,0:25:72.25:0,72,4664	0/0:28,0:28:69.23:0,69,4092	0/0:28,0:28:78.27:0,78,5612	0/0:32,0:32:81.26:0,81,5192	0/0:15,0:15:42.14:0,42,3107	0/0:24,0:24:66.23:0,66,4653	0/0:31,0:31:93.30:0,93,6718	0/0:29,0:29:84.29:0,84,5900	0/0:35,0:35:99:0,105,7751	0/0:30,0:30:90.28:0,90,6145	0/0:28,0:28:78.27:0,78,5604	0/0:22,0:22:63.19:0,63,4548	0/0:31,0:31:84.26:0,84,4972	0/0:29,0:29:81.28:0,81,6042	0/0:49,0:49:99:0,135,10088	0/0:31,0:31:93.32:0,93,6635	0/0:21,0:21:63.22:0,63,4894	0/0:32,0:32:90.31:0,90,6594	0/0:27,0:27:81.28:0,81,6243	0/0:22,0:22:66.23:0,66,4819	0/0:29,0:29:84.28:0,84,5785	0/0:17,0:17:48.16:0,48,3524
chr10	29848448	.	ACGAT	A	9926.54	PASS	AB=0.912;AC=46;AF=0.821;AN=56;BaseQRankSum=0.186;DP=560;FS=37.556;HRun=0;HaplotypeScore=129.7304;InbreedingCoeff=0.2096;MQ=66.29;MQ0=10;MQRankSum=-2.824;QD=19.39;ReadPosRankSum=2.283;VQSLOD=2.9075;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:18,0:18:86.96:158,0,87	1/1:0,13:13:24.08:438,24,0	0/0:22,0:16:25.99:0,26,258	0/0:26,0:11:18.04:0,18,186	1/1:2,27:29:42.09:712,42,0	1/1:3,17:20:30.10:537,30,0	1/1:5,0:5:8.99:76,9,0	1/1:17,19:35:86.71:699,87,0	1/1:0,10:10:9.03:166,9,0	1/1:2,26:27:75.05:997,75,0	0/1:5,18:23:25.42:242,0,25	0/1:9,1:10:29.15:183,0,29	1/1:1,17:18:18.06:329,18,0	1/1:3,18:21:21.07:380,21,0	1/1:0,22:22:30.10:556,30,0	0/1:23,0:23:99:243,0,334	1/1:22,0:22:3.01:38,3,0	1/1:15,0:15:6.02:77,6,0	1/1:23,0:23:56.98:543,57,0	1/1:21,0:21:27.09:341,27,0	1/1:8,0:8:9:95,9,0	1/1:0,20:20:24.01:446,24,0	0/1:20,0:20:99:185,0,345	0/1:18,0:18:99:228,0,217	1/1:1,18:19:21.07:390,21,0	1/1:0,28:28:84.04:1087,84,0	1/1:0,14:16:21.07:391,21,0	1/1:2,24:26:21.07:390,21,0
chr10	29848449	.	CGATCGATA	C	4078.22	PASS	AB=0.988;AC=22;AF=0.393;AN=56;BaseQRankSum=-10.877;DP=558;FS=3.044;HRun=0;HaplotypeScore=179.3240;InbreedingCoeff=0.1892;MQ=66.24;MQ0=10;MQRankSum=3.432;QD=12.32;ReadPosRankSum=0.826;VQSLOD=2.8465;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:44.64:0,45,398	0/0:13,0:13:22.94:0,23,122	0/0:21,0:16:25.99:0,26,258	0/0:25,0:10:17.91:0,18,186	0/1:28,1:29:62.46:62,0,144	0/1:19,1:20:55.41:55,0,100	0/1:7,0:7:10.02:64,0,10	1/1:35,0:34:86.71:699,87,0	0/0:10,0:10:8.59:0,9,44	0/1:28,0:27:99:223,0,132	0/1:22,1:23:66.47:66,0,137	0/1:10,0:11:99:102,0,253	0/0:18,0:18:17.08:0,17,89	0/0:20,0:20:20.07:0,20,110	0/0:22,0:22:28.54:0,29,145	0/1:23,0:23:99:214,0,913	1/1:1,21:22:3.01:84,3,0	1/1:2,14:16:6.02:169,6,0	1/1:3,19:22:56.98:774,57,0	1/1:0,21:21:27.09:756,27,0	1/1:8,0:8:9:132,9,0	0/0:20,0:20:22.52:0,23,115	0/1:20,0:20:99:182,0,897	0/1:18,0:18:99:203,0,553	0/0:18,0:18:19.99:0,20,101	0/1:28,0:28:99:293,0,112	0/0:16,0:16:19.92:0,20,100	0/0:24,0:24:19.99:0,20,101
chr10	29848453	.	CGATA	C	4476.36	PASS	AB=1.000;AC=37;AF=0.712;AN=52;BaseQRankSum=7.369;DP=556;FS=7.350;HRun=0;HaplotypeScore=147.9783;InbreedingCoeff=0.2684;MQ=62.70;MQ0=10;MQRankSum=-1.057;QD=10.66;ReadPosRankSum=3.599;VQSLOD=3.8918;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,13:21:24.08:369,24,0	1/1:13,0:13:24.06:259,24,0	./.	./.	1/1:31,0:31:18.10:393,18,0	1/1:20,0:20:8.10:327,8,0	1/1:6,0:6:2.99:23,3,0	0/0:34,0:33:11.84:0,12,78	1/1:11,0:11:9.03:106,9,0	0/1:29,0:28:18.01:339,0,18	0/1:20,0:20:50.42:142,0,50	0/1:11,0:11:17.87:18,0,155	0/1:19,0:19:3.94:185,0,4	0/1:21,0:21:22.93:208,0,23	1/1:22,0:22:30.08:334,30,0	0/0:22,0:22:30.09:0,30,654	1/1:21,0:21:3:29,3,0	1/1:15,0:15:6.01:58,6,0	1/1:19,0:19:15.02:144,15,0	1/1:21,0:21:27.04:258,27,0	1/1:6,0:6:3.01:37,3,0	1/1:23,0:23:2:236,2,0	0/0:20,0:20:30.10:0,30,692	0/0:21,0:21:24.53:0,25,470	1/1:18,0:18:21.05:224,21,0	0/1:31,0:31:9.93:356,0,10	1/1:17,0:17:21.05:222,21,0	0/1:25,0:25:0.93:211,0,1
chr10	29849961	.	G	GA	3460.66	PASS	AB=0.606;AC=51;AF=0.911;AN=56;BaseQRankSum=-4.668;DP=459;FS=0.000;HRun=14;HaplotypeScore=69.3158;InbreedingCoeff=0.5222;MQ=70.60;MQ0=1;MQRankSum=1.325;QD=8.10;ReadPosRankSum=1.872;VQSLOD=2.8133;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:7,12:20:41.67:140,0,42	1/1:10,0:10:24.67:116,25,0	0/0:18,0:13:8.74:0,9,57	0/0:12,0:8:7.55:0,8,54	1/1:24,0:24:26.16:198,26,0	1/1:25,0:25:15.40:177,15,0	1/1:16,0:17:7.12:93,7,0	1/1:24,1:24:36.71:179,37,0	1/1:0,9:9:3:26,3,0	1/1:18,0:19:28.71:120,29,0	1/1:19,0:19:16.03:160,16,0	1/1:8,1:9:16.55:99,17,0	1/1:15,0:15:2.99:80,3,0	1/1:8,0:8:14.29:78,14,0	1/1:10,0:10:22.65:113,23,0	1/1:16,0:16:8.39:94,8,0	1/1:25,1:26:40.44:195,40,0	1/1:22,0:22:50.60:233,51,0	1/1:13,0:13:13.89:93,14,0	1/1:17,1:18:31.24:159,31,0	1/1:7,0:7:11.31:62,11,0	1/1:13,0:13:22.44:113,22,0	1/1:18,1:19:47.02:246,47,0	1/1:13,0:13:31.79:164,32,0	1/1:20,0:20:40.32:162,40,0	1/1:16,0:16:30.80:131,31,0	1/1:16,0:17:27.79:133,28,0	1/1:17,0:17:9.01:94,9,0
chr10	29849963	.	A	AAG	4583.67	PASS	AB=1.000;AC=47;AF=0.839;AN=56;BaseQRankSum=-3.146;DP=457;FS=14.409;HRun=0;HaplotypeScore=74.4320;InbreedingCoeff=0.7761;MQ=67.26;MQ0=1;MQRankSum=-1.919;QD=11.46;ReadPosRankSum=3.646;VQSLOD=3.2208;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:25.63:0,26,290	1/1:9,1:10:25.61:159,26,0	0/0:16,0:10:10.19:0,10,210	0/0:12,0:7:17.95:0,18,173	1/1:24,0:24:55.60:338,56,0	1/1:22,2:24:53.58:417,54,0	1/1:17,0:17:28.14:154,28,0	1/1:28,0:27:50.79:295,51,0	0/0:9,0:9:2.88:0,3,15	1/1:17,0:17:48.91:306,49,0	1/1:15,3:18:33.88:316,34,0	1/1:9,0:9:13.78:64,14,0	1/1:15,0:15:15.08:85,15,0	1/1:8,0:8:14.13:70,14,0	1/1:9,1:10:23.07:149,23,0	1/1:15,0:15:22.02:121,22,0	1/1:27,0:27:39.92:200,40,0	1/1:23,0:23:56.33:273,56,0	1/1:12,1:13:15.93:169,16,0	1/1:17,0:17:12.52:152,13,0	0/1:8,0:8:17.93:28,0,18	1/1:13,1:14:16.79:149,17,0	1/1:19,1:20:44.42:243,44,0	1/1:13,0:13:34:174,34,0	1/1:20,0:20:43.92:201,44,0	1/1:15,1:16:33.75:235,34,0	1/1:17,0:17:22.87:127,23,0	1/1:17,0:17:28.82:158,29,0
chr10	29849964	.	A	AG	9982.94	PASS	AB=0.538;AC=47;AF=0.839;AN=56;BaseQRankSum=-8.124;DP=460;FS=37.342;HRun=0;HaplotypeScore=46.8623;InbreedingCoeff=0.7959;MQ=68.34;MQ0=1;MQRankSum=-1.303;QD=24.83;ReadPosRankSum=6.064;VQSLOD=2.8873;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:24.15:0,24,244	1/1:1,9:10:26.97:312,27,0	0/0:17,0:11:23.91:0,24,244	0/0:12,0:7:17.56:0,18,174	1/1:2,22:24:61.96:643,62,0	1/1:10,14:24:65.97:705,66,0	1/1:3,15:18:29.08:353,29,0	1/1:7,21:28:49.55:620,50,0	0/0:9,0:9:0.47:0,0,1	1/1:1,16:17:46.62:549,47,0	1/1:7,12:19:44.08:512,44,0	1/1:1,8:9:18.03:200,18,0	1/1:2,14:16:20.86:251,21,0	1/1:0,8:8:15.05:186,15,0	1/1:1,9:10:23.99:281,24,0	1/1:1,13:14:27.08:333,27,0	1/1:2,25:27:50.80:559,51,0	1/1:0,22:22:57.17:694,57,0	1/1:3,10:13:27.96:317,28,0	1/1:2,12:17:18.16:362,18,0	0/1:1,6:7:15.58:94,0,16	1/1:1,13:14:30.16:324,30,0	1/1:2,18:20:51.04:576,51,0	1/1:0,13:13:36.06:423,36,0	1/1:1,19:20:25.91:527,26,0	1/1:3,13:17:39.38:441,39,0	1/1:2,14:17:24.95:354,25,0	1/1:3,14:17:27.52:368,28,0
chr10	29851338	.	TTGTGTGTGTG	T	2613.66	PASS	AB=0.875;AC=26;AF=0.542;AN=48;BaseQRankSum=6.598;DP=629;FS=4.981;HRun=0;HaplotypeScore=177.8663;InbreedingCoeff=0.6542;MQ=63.56;MQ0=10;MQRankSum=-5.965;QD=9.24;ReadPosRankSum=0.943;VQSLOD=2.4079;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:36.12:0,36,1425	1/1:5,2:7:2.69:88,3,0	./.	./.	1/1:12,3:15:8.99:191,9,0	0/0:18,0:18:5.99:0,6,48	0/1:8,0:12:18.01:20,0,18	0/1:32,0:32:1.20:8,0,1	0/0:21,0:20:8.28:0,8,266	1/1:14,4:18:6.85:164,7,0	1/1:7,3:10:3.01:89,3,0	1/1:17,9:26:12.04:354,12,0	1/1:15,3:18:8.05:264,8,0	1/1:18,3:21:2.97:89,3,0	0/0:23,0:25:30.10:0,30,1234	1/1:17,10:27:12.04:355,12,0	0/0:31,0:31:33.11:0,33,1196	0/0:9,0:9:15.05:0,15,470	0/0:23,0:23:14.53:0,15,442	0/0:21,0:21:21.07:0,21,840	0/0:59,0:59:54.16:0,54,1923	1/1:12,4:17:9.03:247,9,0	1/1:23,4:27:6.02:157,6,0	./.	1/1:20,9:29:12.04:338,12,0	0/0:20,0:20:3.27:0,3,8	1/1:18,5:24:15.99:426,16,0	./.
chr10	29852562	.	C	CAAACAAAT	5218.33	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-2.690;DP=545;FS=11.606;HRun=0;HaplotypeScore=120.6693;InbreedingCoeff=0.9863;MQ=57.26;MQ0=2;MQRankSum=-7.277;QD=39.24;ReadPosRankSum=-2.244;VQSLOD=3.7126;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,108,2539	0/0:7,0:7:18.03:0,18,352	0/0:13,0:12:27.01:0,27,402	0/0:9,0:7:15.05:0,15,331	0/0:29,0:29:84.21:0,84,2068	0/0:21,0:21:63.15:0,63,1464	0/0:16,0:16:45.09:0,45,917	0/0:36,0:36:99:0,99,1704	1/1:2,16:20:21.07:924,21,0	0/0:28,0:28:81.13:0,81,1544	0/0:18,0:18:48.14:0,48,1224	0/0:22,0:22:66.16:0,66,1424	0/0:12,0:12:36.09:0,36,874	0/0:21,0:21:51.16:0,51,1296	1/1:2,17:21:21.07:923,21,0	0/0:21,0:21:60.09:0,60,1178	1/1:0,18:19:14.88:429,15,0	1/1:2,16:20:21.07:902,21,0	1/1:2,13:20:56.80:907,57,0	1/1:1,16:18:41.55:727,42,0	1/1:14,0:14:35.64:406,36,0	0/0:10,0:10:30.09:0,30,751	0/0:21,0:21:63.10:0,63,1216	0/0:14,0:14:41.79:0,42,751	0/0:22,0:22:60.12:0,60,1229	0/0:25,0:25:72.09:0,72,1264	0/0:23,0:22:60.05:0,60,1225	0/0:5,0:5:13.86:0,14,343
chr10	29852881	.	TG	T	5977.07	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=5.318;DP=456;FS=15.764;HRun=9;HaplotypeScore=48.2834;InbreedingCoeff=0.9786;MQ=83.29;MQ0=0;MQRankSum=-0.467;QD=21.97;ReadPosRankSum=2.642;VQSLOD=3.9950;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:69.16:0,69,775	1/1:0,5:5:15.01:137,15,0	0/0:21,0:21:41.50:0,42,464	0/0:23,0:22:34.50:0,35,363	1/1:0,14:14:41.93:368,42,0	1/1:3,20:22:51.03:466,51,0	1/1:4,16:20:45.02:412,45,0	1/1:5,26:31:75:677,75,0	0/0:17,0:16:39.12:0,39,450	1/1:3,16:19:47.89:433,48,0	1/1:2,10:12:30.02:275,30,0	1/1:1,14:15:39.01:357,39,0	1/1:2,15:18:44.01:382,44,0	1/1:2,11:13:30.02:275,30,0	0/0:16,0:16:45.12:0,45,509	1/1:2,18:19:42.02:384,42,0	0/0:27,0:27:75.16:0,75,832	0/0:14,0:14:36.09:0,36,405	0/0:17,0:16:39.10:0,39,438	0/0:6,0:6:18.05:0,18,202	0/0:14,0:14:30.06:0,30,325	1/1:2,4:6:9:82,9,0	1/1:1,10:11:30.01:274,30,0	1/1:3,18:21:51.02:467,51,0	1/1:3,10:13:30.01:275,30,0	1/1:1,11:12:33.02:302,33,0	1/1:2,13:15:36.01:329,36,0	1/1:0,4:4:9:82,9,0
chr10	29853032	.	A	ATC	368.44	PASS	AB=0.778;AC=10;AF=0.200;AN=50;BaseQRankSum=0.147;DP=279;FS=5.893;HRun=0;HaplotypeScore=95.7232;InbreedingCoeff=0.5744;MQ=42.93;MQ0=11;MQRankSum=-1.063;QD=6.95;ReadPosRankSum=0.114;VQSLOD=2.4180;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:10:3.01:0,3,43	0/0:5,0:5:5.75:0,6,85	0/0:18,0:9:20.73:0,21,253	0/0:12,0:5:6.02:0,6,86	0/0:12,0:12:6.02:0,6,85	./.	0/0:9,0:9:6.01:0,6,66	0/0:17,0:15:43.31:0,43,406	./.	0/0:17,0:16:27.05:0,27,318	0/0:8,0:8:3.01:0,3,43	0/1:9,0:9:0:0,0,0	0/0:6,0:6:12.04:0,12,147	0/0:4,0:4:3.01:0,3,43	./.	0/0:10,0:9:9.03:0,9,129	1/1:6,0:5:6.02:100,6,0	1/1:5,5:9:4.59:74,5,0	1/1:5,2:7:15.05:242,15,0	1/1:3,7:10:5.99:80,6,0	0/1:2,8:7:0:0,0,0	0/0:6,0:6:6.02:0,6,86	0/0:12,0:12:6.02:0,6,85	0/0:10,0:10:15.04:0,15,186	0/0:20,0:20:14.98:0,15,173	0/0:11,0:11:24.06:0,24,281	0/0:11,0:11:27.07:0,27,339	0/0:9,0:9:27.04:0,27,330
chr10	29853034	.	CTA	C	248.01	PASS	AB=1.000;AC=9;AF=0.188;AN=48;BaseQRankSum=0.091;DP=269;FS=6.027;HRun=0;HaplotypeScore=91.5070;InbreedingCoeff=0.3938;MQ=42.47;MQ0=12;MQRankSum=-1.329;QD=5.28;ReadPosRankSum=0.699;VQSLOD=2.4658;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:9:3.01:0,3,57	0/0:5,0:5:6.02:0,6,100	0/0:17,0:9:21.07:0,21,339	0/0:12,0:4:6.02:0,6,115	0/0:12,0:12:6.02:0,6,99	./.	0/1:6,0:6:8.97:9,0,106	0/0:18,0:15:41.69:0,42,519	./.	0/0:17,0:16:27.09:0,27,468	0/0:8,0:8:3.01:0,3,43	0/1:9,0:9:0:0,0,0	0/0:6,0:6:11.96:0,12,174	0/0:4,0:4:3.01:0,3,43	./.	0/0:10,0:9:9.03:0,9,143	1/1:3,3:5:6.02:78,6,0	0/1:10,0:8:24.13:26,0,24	1/1:4,2:6:8.17:204,8,0	1/1:8,2:10:5.99:55,6,0	./.	0/0:6,0:6:6.02:0,6,100	0/0:11,0:11:6.02:0,6,100	0/0:8,0:8:15.05:0,15,272	0/0:20,0:20:15:0,15,287	0/0:11,0:11:24.08:0,24,414	0/0:11,0:11:26.81:0,27,437	0/0:9,0:9:27.09:0,27,485
chr10	29853044	.	ATCTCTCTCTCTCTCTCTC	A	3799.36	PASS	AB=0.833;AC=27;AF=0.844;AN=32;BaseQRankSum=0.943;DP=248;FS=18.168;HRun=0;HaplotypeScore=104.0690;InbreedingCoeff=0.5035;MQ=36.13;MQ0=16;MQRankSum=1.108;QD=27.53;ReadPosRankSum=0.992;VQSLOD=1.1991;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:17,0:5:15.02:0,15,192	0/0:12,0:3:6.02:0,6,106	./.	./.	0/1:4,0:5:26.40:64,0,26	1/1:4,14:14:39.08:765,39,0	./.	1/1:2,13:15:30:670,30,0	./.	1/1:1,0:10:0.47:1,0,0	1/1:4,0:5:9:89,9,0	./.	./.	./.	1/1:7,0:6:0.94:6,1,0	1/1:8,0:6:6.02:107,6,0	1/1:6,0:6:17.98:215,18,0	1/1:12,0:12:2.50:9,2,0	./.	./.	./.	1/1:6,0:6:9.03:145,9,0	1/1:15,0:19:11.88:147,12,0	1/1:0,8:8:18.52:366,19,0	1/1:7,0:9:21.54:599,22,0	1/1:7,0:9:21:616,21,0
chr10	29853068	.	CTA	C	324.21	PASS	AB=0.833;AC=8;AF=0.286;AN=28;BaseQRankSum=-0.645;DP=241;FS=23.189;HRun=0;HaplotypeScore=83.7971;InbreedingCoeff=0.3523;MQ=30.94;MQ0=21;MQRankSum=-0.111;QD=7.05;ReadPosRankSum=0.200;VQSLOD=0.9342;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	./.	./.	./.	0/0:22,0:18:30.74:0,31,365	0/0:4,2:5:0.47:0,0,1	0/0:18,0:18:25.91:0,26,258	./.	0/1:10,0:10:0:0,0,0	1/1:2,0:2:2.88:15,3,0	./.	0/0:3,2:5:0.47:0,0,1	./.	1/1:5,2:6:5.77:42,6,0	0/1:3,3:5:20.05:94,0,20	0/1:5,5:9:2.80:266,0,3	0/0:7,7:14:0.47:0,0,1	./.	./.	./.	./.	0/1:11,0:11:0:0,0,0	0/0:8,0:8:3.01:0,3,51	0/0:7,0:7:11.36:0,11,59	0/0:9,0:8:9.46:0,9,74
chr10	29853070	.	A	ATC	447.18	PASS	AB=0.981;AC=14;AF=0.438;AN=32;BaseQRankSum=0.421;DP=254;FS=14.916;HRun=0;HaplotypeScore=93.9210;InbreedingCoeff=0.2377;MQ=30.40;MQ0=20;MQRankSum=-0.034;QD=4.91;ReadPosRankSum=1.194;VQSLOD=1.9108;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	./.	./.	./.	0/0:22,0:18:26.61:0,27,301	0/0:3,3:5:0:0,0,0	0/1:20,0:19:2.94:3,0,122	./.	0/1:8,0:8:0:0,0,0	1/1:2,0:2:0.89:2,1,0	./.	0/0:3,1:4:0:0,0,0	./.	1/1:8,1:8:5.90:42,6,0	0/1:7,1:7:17.13:140,0,17	1/1:11,1:11:7.17:344,7,0	0/0:8,6:14:0:0,0,0	1/1:9,1:7:0.88:2,1,0	./.	./.	0/1:4,0:4:0:0,0,0	0/1:9,0:11:0:0,0,0	0/0:8,0:8:3.01:0,3,35	0/1:7,0:7:3.44:3,0,33	0/0:8,0:8:2.62:0,3,36
chr10	29853086	.	ATC	A	60.67	PASS	AB=0.981;AC=7;AF=0.269;AN=26;BaseQRankSum=3.565;DP=247;FS=2.390;HRun=0;HaplotypeScore=71.8206;InbreedingCoeff=0.2778;MQ=27.90;MQ0=27;MQRankSum=1.334;QD=1.64;ReadPosRankSum=-0.082;VQSLOD=1.0955;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	./.	./.	./.	0/0:22,0:17:32.37:0,32,389	0/0:6,0:5:0.47:0,0,1	0/1:16,1:16:74.24:74,0,130	./.	0/1:8,0:8:0:0,0,0	1/1:1,0:1:2.96:19,3,0	./.	0/0:3,0:3:0.47:0,0,1	./.	0/0:12,0:11:20.10:0,20,276	0/0:8,0:6:3.19:0,3,147	0/0:13,0:12:36.11:0,36,517	0/0:15,0:15:0.47:0,0,1	./.	./.	./.	./.	./.	1/1:4,0:4:3.01:34,3,0	0/0:6,0:6:12.03:0,12,167	0/1:7,0:6:25.08:25,0,81
chr10	29853088	.	C	CTA	118.34	PASS	AB=0.899;AC=6;AF=0.250;AN=24;BaseQRankSum=3.447;DP=239;FS=2.401;HRun=0;HaplotypeScore=66.3767;InbreedingCoeff=0.2619;MQ=27.71;MQ0=27;MQRankSum=0.213;QD=4.55;ReadPosRankSum=-0.120;VQSLOD=2.4441;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	./.	./.	./.	0/0:22,0:17:32.34:0,32,361	0/0:6,0:5:0:0,0,0	0/1:15,0:15:94.61:95,0,108	./.	./.	1/1:1,0:1:2.96:19,3,0	./.	0/0:3,0:3:0:0,0,0	./.	0/0:12,0:11:17.60:0,18,266	0/0:7,0:6:3.17:0,3,143	0/0:13,0:12:36.11:0,36,493	0/0:15,0:15:0:0,0,0	./.	./.	./.	./.	./.	1/1:2,1:3:3.01:53,3,0	0/0:6,0:6:12.02:0,12,152	0/1:5,1:4:43.43:43,0,81
chr10	29853104	.	ATC	A	55.28	PASS	AB=1.000;AC=6;AF=0.231;AN=26;BaseQRankSum=1.809;DP=199;FS=0.000;HRun=0;HaplotypeScore=51.7031;InbreedingCoeff=0.3271;MQ=48.68;MQ0=18;MQRankSum=-2.368;QD=2.05;ReadPosRankSum=1.007;VQSLOD=0.6561;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:22,0:9:24.55:0,25,353	0/0:18,0:5:5.95:0,6,52	./.	./.	./.	0/0:17,0:14:17.81:0,18,261	0/0:5,0:4:0.47:0,0,1	0/1:12,0:11:49.32:49,0,56	./.	./.	./.	./.	0/0:3,0:3:0.47:0,0,1	./.	0/0:15,1:15:28.94:0,29,440	0/0:7,0:5:3.96:0,4,125	0/1:8,0:8:2.93:3,0,177	0/0:12,0:12:0.47:0,0,1	./.	./.	./.	./.	./.	1/1:2,0:2:3.01:31,3,0	0/0:4,0:4:0.89:0,1,2	1/1:5,0:4:6.01:63,6,0
chr10	29853106	.	C	CTA	36.14	PASS	AB=1.000;AC=6;AF=0.231;AN=26;BaseQRankSum=2.234;DP=183;FS=0.000;HRun=0;HaplotypeScore=47.9331;InbreedingCoeff=0.3703;MQ=53.61;MQ0=17;MQRankSum=-1.542;QD=1.90;ReadPosRankSum=-0.052;VQSLOD=1.3685;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:18,0:9:22.58:0,23,344	0/0:18,0:6:8.30:0,8,51	./.	./.	./.	0/0:17,0:14:34.29:0,34,373	0/0:5,0:4:0:0,0,0	0/0:10,0:10:10.55:0,11,78	./.	./.	./.	./.	0/0:3,0:3:0:0,0,0	./.	0/0:18,0:17:26.24:0,26,259	0/1:8,0:6:11.19:11,0,62	0/1:6,0:6:2.93:3,0,147	0/0:11,0:11:0:0,0,0	./.	./.	./.	./.	./.	1/1:2,0:2:2.99:24,3,0	0/0:1,0:1:0.89:0,1,2	1/1:2,1:2:6.02:89,6,0
chr10	29853114	.	ATC	A	441.12	PASS	AB=0.833;AC=10;AF=0.417;AN=24;BaseQRankSum=0.191;DP=169;FS=11.870;HRun=0;HaplotypeScore=38.8227;InbreedingCoeff=0.2505;MQ=67.40;MQ0=15;MQRankSum=-3.793;QD=10.50;ReadPosRankSum=-1.407;VQSLOD=1.0041;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:20,0:10:27.56:0,28,456	0/0:25,0:11:6.48:0,6,53	./.	./.	./.	1/1:9,7:13:0.43:272,0,0	0/0:5,0:4:0.47:0,0,1	1/1:9,2:10:1.75:85,2,0	./.	./.	./.	./.	0/0:3,0:3:0.47:0,0,1	./.	0/0:17,1:17:26.80:0,27,262	0/1:3,3:5:17.63:74,0,18	0/1:4,0:4:11.77:12,0,88	0/0:8,1:9:0.47:0,0,1	./.	./.	./.	./.	./.	1/1:2,0:2:3.01:40,3,0	./.	1/1:2,1:2:5.99:54,6,0
chr10	29853116	.	C	CTCTA	817.44	PASS	AB=0.759;AC=15;AF=0.577;AN=26;BaseQRankSum=-0.285;DP=168;FS=20.096;HRun=0;HaplotypeScore=44.1129;InbreedingCoeff=0.5849;MQ=70.21;MQ0=15;MQRankSum=-2.377;QD=14.60;ReadPosRankSum=1.204;VQSLOD=1.4756;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,0:7:2.90:16,3,0	./.	0/0:20,0:10:17.47:0,17,352	0/0:29,0:13:9.71:0,10,83	./.	./.	./.	0/0:16,0:13:5.93:0,6,54	0/1:4,1:4:0:0,0,0	0/0:11,0:10:8.21:0,8,56	./.	./.	./.	./.	0/1:2,1:3:0:0,0,0	./.	1/1:9,9:17:26.89:568,27,0	1/1:4,2:5:9:165,9,0	1/1:2,1:3:9:144,9,0	0/1:5,4:9:0:0,0,0	./.	./.	./.	./.	./.	1/1:1,0:2:2.96:19,3,0	./.	1/1:2,0:2:3.07:11,3,0
chr10	29853120	.	A	ATC	126.34	PASS	AB=1.000;AC=10;AF=0.385;AN=26;BaseQRankSum=1.832;DP=149;FS=8.710;HRun=0;HaplotypeScore=40.9440;InbreedingCoeff=0.3210;MQ=74.01;MQ0=14;MQRankSum=-0.358;QD=2.87;ReadPosRankSum=3.761;VQSLOD=0.0415;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:17,0:10:25.55:0,26,384	0/0:29,0:14:12.21:0,12,96	./.	./.	./.	0/0:12,0:9:22.06:0,22,98	0/0:5,0:4:0:0,0,0	1/1:9,0:8:5.54:16,6,0	./.	./.	./.	./.	0/0:3,0:3:0:0,0,0	./.	0/1:16,0:15:21.05:69,0,21	0/1:6,0:5:2.07:58,0,2	0/1:3,0:3:1.77:2,0,30	0/0:9,0:9:0:0,0,0	./.	./.	./.	0/1:5,0:4:0.02:0,0,0	./.	1/1:1,1:2:3.01:35,3,0	./.	1/1:2,1:2:5.50:41,6,0
chr10	29853144	.	GTA	G	34.85	PASS	AB=1.000;AC=4;AF=0.40;AN=10;DP=106;FS=0.000;HRun=0;HaplotypeScore=33.1523;MQ=86.78;MQ0=1;QD=1.52;VQSLOD=0.7072;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	0/0:35,0:17:0:0,0,1	./.	./.	./.	./.	0/1:1,0:1:0:0,0,0	./.	./.	./.	./.	./.	0/0:1,0:1:0:0,0,0	./.	1/1:12,7:20:11.80:97,12,0	./.	./.	0/1:2,0:2:0:0,0,0	./.	./.	./.	./.	./.	./.	./.	./.
chr10	29857679	.	C	CTCTT	2694.97	PASS	AB=1.000;AC=51;AF=0.981;AN=52;BaseQRankSum=-1.906;DP=483;FS=3.296;HRun=0;HaplotypeScore=78.9673;InbreedingCoeff=-0.1009;MQ=56.66;MQ0=9;MQRankSum=0.635;QD=5.88;ReadPosRankSum=-0.309;VQSLOD=1.6291;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:24:34.55:40,0,35	1/1:11,0:11:2.98:22,3,0	./.	./.	1/1:15,0:15:9.03:118,9,0	1/1:11,0:19:3.01:52,3,0	1/1:15,0:15:8.97:74,9,0	1/1:39,0:35:3.74:9,4,0	1/1:12,5:17:3.01:70,3,0	1/1:19,0:19:3.10:70,3,0	1/1:13,0:12:8.77:54,9,0	1/1:10,0:17:9.17:116,9,0	1/1:14,0:15:6.02:104,6,0	1/1:13,0:16:3.48:53,3,0	1/1:11,5:16:12.04:271,12,0	1/1:16,0:16:15.03:175,15,0	1/1:15,11:26:15.05:313,15,0	1/1:15,6:22:6.02:139,6,0	1/1:25,2:26:12.02:192,12,0	1/1:12,0:11:5.98:89,6,0	1/1:6,8:13:12.04:279,12,0	1/1:8,0:8:3:25,3,0	1/1:3,3:6:3.01:70,3,0	1/1:11,1:16:9.01:109,9,0	1/1:10,0:15:3.01:52,3,0	1/1:12,0:20:15.01:178,15,0	1/1:20,0:18:5.97:57,6,0	1/1:14,0:16:3.01:52,3,0
chr10	29857861	.	A	ATATATACTATTTATATCATTTAG	22437.50	PASS	AC=52;AF=0.963;AN=54;BaseQRankSum=-4.368;DP=240;FS=3.510;HRun=0;HaplotypeScore=120.0982;InbreedingCoeff=0.3129;MQ=66.39;MQ0=0;MQRankSum=-3.130;QD=102.92;ReadPosRankSum=2.968;VQSLOD=4.5857;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,0:8:15.05:578,15,0	1/1:0,3:5:9.03:973,9,0	1/1:4,0:3:2.60:10,3,0	0/0:22,0:13:18.66:0,19,264	1/1:3,0:5:9.03:325,9,0	1/1:2,4:11:6.02:380,6,0	1/1:2,0:3:3.01:228,3,0	1/1:45,0:53:99:7211,141,0	1/1:5,0:6:9.03:513,9,0	1/1:3,1:10:12.51:704,13,0	1/1:10,0:10:2.20:1105,2,0	1/1:5,0:8:15.05:613,15,0	1/1:3,0:3:9.03:561,9,0	1/1:5,0:5:12.04:348,12,0	1/1:1,0:2:6.02:187,6,0	1/1:3,0:4:9.03:544,9,0	1/1:7,3:17:18.06:853,18,0	1/1:12,0:15:39.13:2497,39,0	1/1:6,0:6:18.06:927,18,0	1/1:2,2:5:3.01:324,3,0	1/1:2,0:3:6.02:271,6,0	./.	1/1:3,0:3:6.02:120,6,0	1/1:2,0:2:6.02:121,6,0	1/1:5,0:7:18.06:880,18,0	1/1:3,0:3:9.03:611,9,0	1/1:3,3:11:9.03:919,9,0	1/1:8,0:8:24.08:635,24,0
chr10	29857867	.	A	AC	2389.49	PASS	AB=0.778;AC=26;AF=0.481;AN=54;BaseQRankSum=-2.287;DP=205;FS=61.564;HRun=0;HaplotypeScore=64.1941;InbreedingCoeff=-0.2010;MQ=77.61;MQ0=0;MQRankSum=-1.373;QD=14.75;ReadPosRankSum=-1.422;VQSLOD=1.4082;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:3,1:4:36.55:37,0,41	0/1:4,0:4:2.91:3,0,11	0/1:7,0:6:9.24:9,0,31	0/0:24,0:15:18.56:0,19,175	0/1:3,2:5:33.85:34,0,81	0/1:9,0:9:11.05:11,0,35	0/0:1,0:1:2.60:0,3,10	0/1:30,14:44:99:634,0,591	0/1:2,1:4:1.06:60,0,1	0/1:7,0:7:2.77:3,0,95	0/1:2,6:10:0.81:273,0,1	0/1:4,2:6:18.51:37,0,19	1/1:1,1:3:6.02:79,6,0	1/1:2,3:5:9.03:140,9,0	0/0:3,0:3:5.61:0,6,50	0/1:1,2:3:1.13:84,0,1	0/0:13,0:13:5.75:0,6,53	0/1:5,8:15:60.54:395,0,61	0/1:2,4:5:18.79:128,0,19	0/0:2,0:2:2.50:0,2,9	0/1:1,1:3:5.59:37,0,6	./.	1/1:0,0:2:6.02:94,6,0	0/1:1,0:2:27.05:42,0,27	0/1:2,4:6:2.82:169,0,3	0/1:2,1:3:4.96:39,0,5	0/1:6,0:6:3.97:5,0,4	1/1:3,0:8:15.05:222,15,0
chr10	29857871	.	A	ATCATT	2442.28	PASS	AB=0.973;AC=26;AF=0.500;AN=52;BaseQRankSum=5.430;DP=209;FS=37.736;HRun=0;HaplotypeScore=92.8974;InbreedingCoeff=-0.1385;MQ=77.25;MQ0=0;MQRankSum=-6.081;QD=16.17;ReadPosRankSum=1.661;VQSLOD=1.4631;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:6:12.01:0,12,159	1/1:4,0:4:8.36:48,8,0	0/0:7,0:6:7.65:0,8,111	0/0:23,0:15:26.80:0,27,312	0/1:5,0:5:35.77:36,0,172	0/1:9,0:9:57.42:73,0,57	0/0:1,0:1:3.01:0,3,46	0/1:46,0:46:99:599,0,1117	0/1:3,1:4:36.53:150,0,37	0/1:7,0:7:41.84:42,0,151	1/1:7,2:9:12.04:289,12,0	0/1:5,0:5:51.38:51,0,121	1/1:2,1:3:6.02:159,6,0	1/1:5,0:5:3.01:53,3,0	0/0:3,0:3:6.02:0,6,109	0/1:4,0:4:43.62:44,0,61	0/0:14,0:14:6.02:0,6,112	0/1:12,2:14:99:523,0,170	0/1:6,0:5:56.73:57,0,134	1/1:2,0:2:2.50:9,2,0	1/1:2,1:3:6.01:79,6,0	./.	./.	0/0:2,0:2:3.01:0,3,48	0/1:7,0:7:92.47:191,0,92	0/1:3,0:3:37.45:78,0,37	0/1:7,0:7:11.62:26,0,12	1/1:7,1:8:2.92:95,3,0
chr10	29859064	.	C	CTGTGGT	44725.83	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-10.678;DP=785;FS=1.287;HRun=0;HaplotypeScore=144.5443;InbreedingCoeff=0.9949;MQ=77.27;MQ0=0;MQRankSum=-20.593;QD=82.52;ReadPosRankSum=1.350;VQSLOD=6.1624;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,21:36:69.23:2083,69,0	1/1:2,11:13:30.10:1078,30,0	0/0:29,0:29:78.26:0,78,1788	0/0:24,0:24:66.23:0,66,1562	1/1:9,18:30:60.16:1939,60,0	1/1:10,24:35:93.32:3049,93,0	1/1:4,16:22:57.20:1909,57,0	1/1:17,28:46:99:4777,138,0	0/0:23,0:23:63.22:0,63,1489	1/1:10,22:34:93.32:3195,93,0	1/1:5,11:18:27.09:970,27,0	1/1:7,20:30:75.26:2450,75,0	1/1:10,21:35:87.30:2920,87,0	1/1:1,25:27:78.27:2745,78,0	0/0:37,0:37:99:0,105,2469	1/1:4,29:34:84.29:3019,84,0	0/0:28,0:28:81.26:0,81,1867	0/0:20,0:20:57.20:0,57,1334	0/0:29,0:29:84.29:0,84,1967	0/0:23,0:23:63.22:0,63,1511	0/0:30,0:30:87.28:0,87,2034	1/1:8,22:32:75.21:2551,75,0	1/1:8,15:27:47.84:1566,48,0	1/1:1,17:20:35.76:1292,36,0	1/1:8,21:30:69.24:2341,69,0	1/1:15,27:44:99:4248,129,0	1/1:2,19:23:63.22:2258,63,0	1/1:2,2:4:12:337,12,0
chr10	29860304	.	AT	A	10296.75	PASS	AB=0.735;AC=52;AF=0.929;AN=56;BaseQRankSum=-1.965;DP=585;FS=0.000;HRun=12;HaplotypeScore=70.7972;InbreedingCoeff=0.4271;MQ=66.10;MQ0=0;MQRankSum=0.096;QD=17.78;ReadPosRankSum=2.672;VQSLOD=5.8769;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,15:17:38.81:302,39,0	1/1:0,5:6:13.99:99,14,0	0/0:6,0:2:3.01:0,3,30	0/1:8,1:10:3.91:4,0,67	1/1:7,25:32:74.67:579,75,0	1/1:2,19:22:55.81:424,56,0	1/1:3,13:16:35.86:279,36,0	1/1:8,30:38:89.61:691,90,0	1/1:2,12:14:32.85:255,33,0	1/1:7,27:34:80.63:627,81,0	1/1:2,19:22:28.36:393,28,0	1/1:3,17:21:52.83:401,53,0	1/1:5,23:28:65.72:511,66,0	1/1:4,24:28:62.75:487,63,0	1/1:4,16:20:47.79:372,48,0	1/1:0,14:14:38.85:302,39,0	1/1:1,22:24:64.80:493,65,0	1/1:1,16:17:41.83:325,42,0	0/1:9,12:21:19.10:233,0,19	1/1:3,26:29:72.94:577,73,0	1/1:2,6:8:17.92:139,18,0	1/1:2,11:13:26.88:209,27,0	1/1:1,23:24:65.75:511,66,0	1/1:2,5:7:11.94:93,12,0	1/1:5,39:44:74.23:759,74,0	1/1:5,20:25:59.68:455,60,0	1/1:3,22:26:61.66:470,62,0	1/1:4,14:19:18.45:306,18,0
chr10	29861193	.	C	CGTGTGT	4808.80	PASS	AC=50;AF=1.000;AN=50;BaseQRankSum=-2.310;DP=580;FS=0.000;HRun=0;HaplotypeScore=120.6824;InbreedingCoeff=-0.0733;MQ=57.80;MQ0=6;MQRankSum=0.182;QD=9.23;ReadPosRankSum=0.091;VQSLOD=3.7089;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:31:9.02:109,9,0	1/1:6,8:17:10.26:307,10,0	./.	./.	1/1:15,1:25:8.99:165,9,0	1/1:4,10:16:5.23:192,5,0	1/1:21,0:21:24.37:431,24,0	1/1:31,0:31:20.78:157,21,0	1/1:7,0:15:9.03:115,9,0	1/1:12,0:21:20.56:264,21,0	1/1:4,9:15:6.02:135,6,0	./.	1/1:3,8:13:3.01:97,3,0	1/1:10,0:24:8.82:129,9,0	1/1:17,0:17:8.96:111,9,0	1/1:7,9:20:12.04:386,12,0	1/1:27,0:26:11.85:98,12,0	1/1:19,0:19:21.42:291,21,0	1/1:15,0:13:16.60:222,17,0	1/1:11,10:22:7.08:287,7,0	1/1:13,0:19:3.01:38,3,0	1/1:6,8:15:3.01:40,3,0	1/1:15,10:28:6.02:194,6,0	1/1:12,0:30:6.01:63,6,0	1/1:10,9:21:5.93:136,6,0	1/1:14,13:29:39.89:523,40,0	1/1:9,7:21:6.02:175,6,0	1/1:6,0:6:6.02:145,6,0
chr10	29861838	.	C	CT	6427.60	PASS	AB=0.745;AC=51;AF=0.911;AN=56;BaseQRankSum=-4.208;DP=583;FS=0.779;HRun=13;HaplotypeScore=69.9915;InbreedingCoeff=0.1573;MQ=70.26;MQ0=5;MQRankSum=0.920;QD=11.71;ReadPosRankSum=2.149;VQSLOD=4.8632;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:17,22:39:18.95:255,0,19	1/1:4,7:11:3.40:166,3,0	0/1:47,0:21:23.08:23,0,68	0/0:33,0:18:5.07:0,5,36	1/1:3,13:17:18.30:300,18,0	1/1:10,15:25:50.27:453,50,0	1/1:7,16:25:1.82:315,2,0	1/1:13,11:25:32.34:235,32,0	1/1:4,12:17:32.87:293,33,0	1/1:4,20:25:33.54:422,34,0	1/1:4,13:17:35.86:306,36,0	1/1:5,13:19:3.08:146,3,0	0/1:3,5:8:4.62:96,0,5	1/1:4,17:21:21.02:195,21,0	1/1:6,0:18:22.73:115,23,0	1/1:1,18:19:45.05:418,45,0	1/1:8,3:27:31.74:199,32,0	1/1:4,2:27:43.05:248,43,0	1/1:7,8:15:22.81:171,23,0	1/1:4,14:18:17.90:250,18,0	1/1:3,8:11:6.19:79,6,0	1/1:2,8:10:10.05:157,10,0	1/1:2,6:8:6.01:56,6,0	1/1:1,14:15:36.04:334,36,0	1/1:5,19:25:19.66:302,20,0	1/1:9,17:27:12.22:342,12,0	1/1:2,15:16:33.03:303,33,0	1/1:2,11:13:27.03:250,27,0
chr10	29862968	.	TTCTC	T	698.91	PASS	AB=1.000;AC=26;AF=0.619;AN=42;BaseQRankSum=1.816;DP=664;FS=1.450;HRun=0;HaplotypeScore=135.3794;InbreedingCoeff=0.3990;MQ=64.54;MQ0=17;MQRankSum=0.782;QD=2.44;ReadPosRankSum=-0.698;VQSLOD=2.6594;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:26:3.47:28,3,0	1/1:10,0:10:5.74:31,6,0	./.	0/0:63,0:21:0:0,0,0	1/1:19,0:19:3.01:42,3,0	./.	0/1:28,0:28:27.33:27,0,137	./.	1/1:15,0:18:3:28,3,0	./.	1/1:26,1:27:7.77:76,8,0	1/1:21,0:21:5.99:52,6,0	0/0:19,0:19:0:0,0,0	1/1:14,0:15:6.01:67,6,0	0/0:21,0:21:6.02:0,6,96	1/1:25,1:26:3.48:46,3,0	0/0:22,0:26:18.53:0,19,335	0/0:15,0:20:5.49:0,5,24	0/0:16,0:16:0:0,0,0	./.	0/0:19,0:19:5.99:0,6,50	./.	1/1:21,1:22:3:46,3,0	1/1:25,1:27:16.64:199,17,0	0/1:13,0:12:0:0,0,0	1/1:17,0:17:2.98:41,3,0	1/1:13,5:18:9.03:138,9,0	./.
chr10	29864623	.	C	CATCT	5545.43	PASS	AB=0.737;AC=44;AF=0.880;AN=50;BaseQRankSum=0.564;DP=554;FS=5.087;HRun=0;HaplotypeScore=139.5020;InbreedingCoeff=0.3349;MQ=44.80;MQ0=6;MQRankSum=-1.282;QD=11.25;ReadPosRankSum=-0.188;VQSLOD=4.2598;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:15,4:21:7.78:48,0,8	1/1:8,2:10:9.03:213,9,0	./.	./.	1/1:20,10:26:21.02:496,21,0	1/1:14,4:17:6.02:142,6,0	0/0:11,0:11:9.03:0,9,133	1/1:48,0:47:15.58:149,16,0	1/1:14,0:14:8.41:35,8,0	1/1:19,8:28:37.98:627,38,0	1/1:13,3:17:12.04:258,12,0	1/1:12,4:15:11.93:283,12,0	0/1:16,7:22:16.78:582,0,17	1/1:11,4:15:3.01:71,3,0	1/1:8,0:17:8.55:52,9,0	0/0:20,0:19:20.80:0,21,268	1/1:6,0:11:3.06:18,3,0	1/1:1,0:9:6.02:79,6,0	1/1:9,0:9:13.15:204,13,0	1/1:18,4:21:9.26:187,9,0	./.	1/1:14,4:14:5.99:48,6,0	1/1:17,1:18:3.01:46,3,0	1/1:9,3:13:3.01:71,3,0	1/1:16,4:22:9.03:186,9,0	1/1:20,4:23:39:779,39,0	1/1:17,10:26:26.84:547,27,0	1/1:13,11:24:19.88:425,20,0
chr10	29864654	.	CT	C	1366.88	PASS	AB=0.782;AC=14;AF=0.259;AN=54;BaseQRankSum=7.193;DP=534;FS=1.965;HRun=1;HaplotypeScore=197.8081;InbreedingCoeff=-0.2021;MQ=33.87;MQ0=5;MQRankSum=-8.386;QD=4.51;ReadPosRankSum=1.401;VQSLOD=0.3901;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,4:20:9.71:0,10,76	0/0:8,4:12:15.90:0,16,183	0/0:6,0:1:3.01:0,3,44	./.	0/0:23,8:22:29.68:0,30,342	0/1:12,9:18:24.96:25,0,47	0/0:10,5:12:11.02:0,11,190	0/1:30,17:46:99:480,0,1053	0/1:8,4:12:49.92:50,0,51	0/1:22,11:29:99:283,0,360	0/0:11,3:14:21.04:0,21,250	0/1:16,8:20:56.35:56,0,98	0/1:25,6:25:76.90:77,0,210	0/0:11,2:12:5.90:0,6,77	1/1:11,13:19:8.15:39,8,0	0/1:14,5:18:25.35:25,0,393	0/1:5,4:8:7.40:7,0,27	0/0:4,2:3:1.10:0,1,41	0/1:11,1:11:40.06:40,0,267	0/0:11,7:17:12.76:0,13,154	0/1:7,0:5:0.23:0,0,0	0/0:12,7:15:11.73:0,12,169	0/0:11,7:17:11.69:0,12,184	0/0:9,2:11:3:0,3,29	0/0:11,5:15:17.63:0,18,246	0/1:21,11:28:99:320,0,466	0/1:19,13:30:99:108,0,309	0/0:20,5:22:1.08:0,1,381
chr10	29864659	.	TATC	T	4554.45	PASS	AB=0.981;AC=43;AF=0.768;AN=56;BaseQRankSum=0.746;DP=545;FS=9.496;HRun=0;HaplotypeScore=216.5355;InbreedingCoeff=0.0819;MQ=32.15;MQ0=6;MQRankSum=-0.746;QD=8.83;ReadPosRankSum=-1.966;VQSLOD=2.5217;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:22,1:20:0.35:17,0,0	1/1:11,0:11:10.79:82,11,0	0/0:8,0:1:3.01:0,3,42	0/0:6,0:3:3.01:0,3,42	1/1:33,0:24:7.59:65,8,0	1/1:21,0:18:9.76:136,10,0	0/0:15,0:12:9.55:0,10,126	0/1:46,0:45:98.99:1121,0,99	1/1:7,7:14:18.06:287,18,0	0/1:35,0:31:16.63:577,0,17	1/1:15,1:16:11.39:105,11,0	1/1:25,0:21:16.66:169,17,0	0/1:31,1:26:29.08:276,0,29	1/1:13,0:12:2.75:31,3,0	1/1:23,2:20:8.79:81,9,0	0/1:19,0:18:45:45,0,299	0/1:8,1:8:21.70:22,0,22	1/1:6,0:3:3.93:77,4,0	0/1:11,0:10:71.88:132,0,72	1/1:20,0:19:4.08:52,4,0	0/1:7,0:5:0:0,0,0	1/1:18,0:14:5.59:48,6,0	1/1:16,0:15:3.01:46,3,0	1/1:9,2:11:3.01:31,3,0	1/1:17,0:16:7.70:94,8,0	1/1:30,0:26:22.31:624,22,0	1/1:33,0:30:24.90:306,25,0	1/1:25,0:22:5.47:132,5,0
chr10	29864662	.	C	CT	5142.04	PASS	AB=0.704;AC=43;AF=0.768;AN=56;BaseQRankSum=3.175;DP=537;FS=0.770;HRun=1;HaplotypeScore=217.5248;InbreedingCoeff=0.1729;MQ=30.81;MQ0=7;MQRankSum=-1.141;QD=10.24;ReadPosRankSum=0.548;VQSLOD=2.6684;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:14,8:21:12.74:46,0,13	1/1:3,8:11:11.67:130,12,0	0/0:11,0:1:3.01:0,3,42	0/0:8,0:4:6.01:0,6,69	1/1:16,16:23:12.12:71,12,0	1/1:14,13:24:16.54:165,17,0	0/0:10,6:12:9.12:0,9,125	0/1:16,28:43:99:1233,0,108	1/1:8,6:14:17.87:210,18,0	1/1:18,16:30:55.88:767,56,0	1/1:6,8:15:11.59:114,12,0	1/1:12,14:22:17.35:187,17,0	0/1:19,12:25:7.18:247,0,7	1/1:5,7:11:2.53:11,3,0	1/1:4,20:19:8.79:84,9,0	0/1:14,7:20:60.57:61,0,227	0/1:3,7:9:27.79:28,0,32	1/1:3,3:3:8.76:101,9,0	0/1:6,3:8:44.46:142,0,44	1/1:8,10:17:6.98:77,7,0	0/1:5,2:5:0:0,0,0	1/1:8,9:13:5.67:48,6,0	1/1:5,9:13:3.01:46,3,0	1/1:8,2:11:2.93:31,3,0	1/1:8,9:16:8.20:99,8,0	1/1:12,17:25:63.49:733,63,0	1/1:16,15:28:37.16:369,37,0	1/1:10,8:15:20.59:143,21,0
chr10	29864672	.	T	TC	3233.06	PASS	AB=0.739;AC=29;AF=0.518;AN=56;BaseQRankSum=-1.833;DP=512;FS=24.136;HRun=0;HaplotypeScore=232.5158;InbreedingCoeff=-0.2958;MQ=27.20;MQ0=6;MQRankSum=3.173;QD=7.33;ReadPosRankSum=7.394;VQSLOD=1.9274;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:12,10:20:29.19:59,0,29	1/1:7,4:11:2.03:46,2,0	0/0:14,0:1:3.01:0,3,42	0/0:9,0:4:6.02:0,6,84	1/1:17,15:22:7.15:112,7,0	0/1:17,11:25:19.03:101,0,19	0/0:9,5:10:6.18:0,6,38	0/1:30,3:32:99:244,0,408	0/1:14,0:14:58.53:59,0,61	0/1:17,13:27:99:575,0,108	0/1:10,6:16:10.75:84,0,11	0/1:13,12:21:8.71:107,0,9	0/1:17,15:27:38.02:272,0,38	1/1:5,8:13:0.21:43,0,0	1/1:23,1:19:7.18:126,7,0	0/1:10,10:19:26.79:284,0,27	0/1:9,1:9:31.36:36,0,31	0/1:4,2:3:9.08:33,0,9	0/1:3,4:7:53.75:210,0,54	0/0:17,3:19:3.84:0,4,9	0/1:2,3:3:0.01:0,0,0	0/1:8,7:12:0.01:0,0,1	0/0:8,6:13:0.68:0,1,1	0/1:6,3:9:0.08:0,0,0	1/1:11,6:16:1.87:43,2,0	0/1:17,10:23:99:426,0,141	0/1:18,12:26:24.41:303,0,24	1/1:6,8:11:0.15:208,0,0
chr10	29864676	.	C	CTAT	3565.07	PASS	AB=0.973;AC=38;AF=0.679;AN=56;BaseQRankSum=0.898;DP=511;FS=2.366;HRun=0;HaplotypeScore=241.1959;InbreedingCoeff=0.0011;MQ=26.60;MQ0=6;MQRankSum=-1.625;QD=7.59;ReadPosRankSum=4.806;VQSLOD=2.6647;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:22,1:20:0.25:5,0,0	1/1:12,0:12:7.26:74,7,0	0/0:15,0:1:3.01:0,3,50	0/0:9,0:4:9.03:0,9,132	1/1:30,1:21:2.76:31,3,0	0/1:27,1:25:5.69:130,0,6	0/1:14,0:10:4.51:12,0,5	0/1:33,0:32:99:256,0,253	1/1:12,0:12:11.39:153,11,0	0/1:27,2:26:60.69:663,0,61	0/1:15,1:16:1.23:28,0,1	1/1:23,3:22:1.48:136,1,0	1/1:28,1:24:14.89:230,15,0	1/1:12,1:13:11.82:77,12,0	0/1:23,0:19:18.31:29,0,18	1/1:20,0:19:15.67:150,16,0	0/1:10,0:9:6.16:6,0,15	0/1:6,0:3:24.34:24,0,28	0/1:6,1:7:6.69:191,0,7	1/1:20,0:19:10.68:100,11,0	0/1:5,0:3:0:0,0,0	0/0:17,0:14:2.07:0,2,5	1/1:12,2:13:0.22:13,0,0	0/1:10,0:10:0:0,0,0	1/1:18,0:17:1.80:15,2,0	0/1:26,1:23:2.14:594,0,2	1/1:28,2:26:37.02:509,37,0	1/1:14,0:11:4.85:139,5,0
chr10	29864678	.	ATCTG	A	4009.72	PASS	AB=0.964;AC=42;AF=0.808;AN=52;BaseQRankSum=-2.722;DP=508;FS=0.000;HRun=0;HaplotypeScore=236.8945;InbreedingCoeff=0.4612;MQ=25.93;MQ0=6;MQRankSum=0.189;QD=9.18;ReadPosRankSum=-1.541;VQSLOD=2.6814;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:22,1:20:1.63:26,2,0	1/1:12,0:12:20.51:203,21,0	./.	0/0:9,0:4:8.96:0,9,72	1/1:30,2:22:8.72:85,9,0	1/1:24,3:24:38.53:368,39,0	1/1:15,1:12:5.62:28,6,0	1/1:28,2:29:50.55:379,51,0	1/1:9,5:14:20.45:197,20,0	1/1:26,4:27:30.76:354,31,0	1/1:17,0:17:14.45:94,14,0	1/1:27,0:23:25.87:196,26,0	1/1:27,1:23:34.07:249,34,0	1/1:12,0:12:8.94:100,9,0	0/0:22,0:18:3.01:0,3,30	1/1:18,1:18:20.32:173,20,0	0/0:10,0:9:0.47:0,0,1	0/1:6,0:3:19.17:19,0,26	1/1:8,0:8:7.60:108,8,0	1/1:17,3:19:35.06:313,35,0	./.	1/1:14,3:14:14.42:79,14,0	1/1:13,1:13:14.15:91,14,0	0/0:10,0:10:0.47:0,0,1	1/1:16,1:16:23.14:158,23,0	1/1:22,3:21:55.95:468,56,0	1/1:27,3:26:20.40:273,20,0	0/1:12,1:10:0.91:49,0,1
chr10	29864712	.	CT	C	2954.76	PASS	AB=0.794;AC=39;AF=0.696;AN=56;BaseQRankSum=4.135;DP=477;FS=5.235;HRun=1;HaplotypeScore=206.9424;InbreedingCoeff=0.1404;MQ=37.09;MQ0=5;MQRankSum=-2.054;QD=6.87;ReadPosRankSum=5.918;VQSLOD=0.8824;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:17,4:19:7.78:39,8,0	1/1:1,8:9:26.25:169,26,0	0/0:14,0:8:21.07:0,21,297	0/0:7,0:3:9.03:0,9,133	0/1:16,10:23:3.81:39,0,4	1/1:12,12:24:12.85:194,13,0	0/1:13,3:14:22.14:48,0,22	0/1:12,6:14:99:157,0,149	0/1:17,3:20:66.33:66,0,158	0/1:22,7:29:99:321,0,107	1/1:8,9:17:9.76:99,10,0	1/1:14,10:23:28.50:183,28,0	1/1:18,12:30:27.86:225,28,0	1/1:10,4:14:3.19:39,3,0	0/0:14,1:14:5.60:0,6,55	1/1:15,9:23:25.04:153,25,0	0/0:10,1:10:5.59:0,6,34	0/1:5,1:5:38.55:39,0,77	0/1:8,1:8:19.49:159,0,19	1/1:9,14:23:8.60:176,9,0	1/1:8,0:7:0.91:4,1,0	0/1:10,6:16:0.67:54,0,1	1/1:10,6:16:8.57:66,9,0	1/1:9,2:11:2.19:8,2,0	1/1:4,9:13:23.88:152,24,0	0/1:12,11:21:54.73:390,0,55	1/1:14,14:27:44.94:281,45,0	1/1:2,3:4:8.49:58,8,0
chr10	29864716	.	C	CCT	774.02	PASS	AB=0.571;AC=33;AF=0.589;AN=56;BaseQRankSum=-2.742;DP=507;FS=50.834;HRun=0;HaplotypeScore=216.5608;InbreedingCoeff=-0.2280;MQ=39.26;MQ0=4;MQRankSum=2.845;QD=1.68;ReadPosRankSum=2.768;VQSLOD=0.9839;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:4,1:21:2.58:18,3,0	0/1:2,0:10:17.95:27,0,18	0/0:14,0:9:24.06:0,24,348	0/0:8,0:3:9.03:0,9,147	0/1:3,0:24:8.51:9,0,13	0/1:4,0:24:24.31:24,0,57	0/1:2,1:15:8.69:9,0,29	0/1:17,0:18:99:125,0,191	0/0:22,0:25:33.94:0,34,299	0/1:7,0:30:99:142,0,177	0/1:3,0:18:6.80:8,0,7	0/1:4,0:25:7.61:22,0,8	0/1:5,0:29:22.04:22,0,42	0/1:4,0:17:2.96:3,0,26	1/1:3,0:14:3:26,3,0	0/1:1,1:20:17.16:19,0,17	1/1:1,2:15:1.82:5,2,0	0/1:3,0:5:36.87:42,0,37	1/1:3,0:8:18.23:114,18,0	0/1:3,0:25:10.98:11,0,39	1/1:7,0:7:5.89:38,6,0	1/1:4,0:15:5.15:11,5,0	0/1:4,0:17:2.20:15,0,2	1/1:2,0:11:3.37:16,3,0	1/1:8,0:17:13.84:88,14,0	0/1:6,0:22:66.12:66,0,146	0/1:9,0:32:23.46:61,0,23	0/1:1,0:4:3.16:10,0,3
chr10	29864726	.	T	TC	4517.37	PASS	AB=0.973;AC=24;AF=0.429;AN=56;BaseQRankSum=9.949;DP=525;FS=1.338;HRun=0;HaplotypeScore=179.0056;InbreedingCoeff=-0.4505;MQ=42.71;MQ0=3;MQRankSum=-5.942;QD=10.53;ReadPosRankSum=0.817;VQSLOD=5.1034;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:19,0:20:27.52:110,0,28	0/1:11,0:11:52.27:259,0,52	0/0:16,0:12:29.09:0,29,354	0/0:8,0:4:12.04:0,12,158	0/1:26,0:25:99:112,0,132	0/1:23,0:23:42.73:475,0,43	0/1:17,0:15:42.30:49,0,42	0/1:29,4:30:76.89:77,0,752	1/1:12,10:25:56.36:746,56,0	0/0:27,0:27:4.90:0,5,342	0/1:18,0:18:15.42:154,0,15	0/1:22,1:23:6.87:251,0,7	0/1:30,1:31:99:293,0,200	0/1:20,0:20:32.70:122,0,33	0/1:9,3:11:1.31:1,0,34	1/1:19,0:19:18.04:232,18,0	0/1:19,0:18:31.53:32,0,74	0/1:7,0:6:4.89:5,0,85	0/1:11,1:11:79.56:80,0,100	0/1:27,0:27:99:443,0,147	0/0:8,1:9:8.86:0,9,142	0/1:14,0:14:66.92:190,0,67	0/1:15,0:15:63.03:198,0,63	0/0:13,1:14:2.85:0,3,74	0/1:18,0:18:99:315,0,145	0/0:22,0:21:11.65:0,12,274	0/1:33,0:29:99:335,0,180	0/1:5,0:4:21.53:40,0,22
chr10	29865722	.	G	GT	14265.04	PASS	AB=1.000;AC=51;AF=0.911;AN=56;BaseQRankSum=-6.280;DP=698;FS=14.628;HRun=10;HaplotypeScore=80.1262;InbreedingCoeff=0.8465;MQ=74.25;MQ0=1;MQRankSum=-0.755;QD=21.81;ReadPosRankSum=1.478;VQSLOD=4.4537;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,38:41:68.60:933,69,0	1/1:1,11:12:8.57:295,9,0	0/0:25,0:19:15.97:0,16,165	0/1:26,0:18:0.94:1,0,99	1/1:6,27:34:80.91:807,81,0	1/1:4,21:25:26.48:487,26,0	1/1:1,13:14:36.09:384,36,0	1/1:10,22:32:44.33:612,44,0	0/0:18,0:18:23.88:0,24,342	1/1:7,30:37:43.94:870,44,0	1/1:4,24:28:69.13:723,69,0	1/1:3,22:25:53.82:575,54,0	1/1:6,15:22:44.95:462,45,0	1/1:5,15:20:29.46:508,29,0	1/1:3,22:25:29.42:519,29,0	1/1:1,25:27:59.87:622,60,0	1/1:2,14:16:39.10:416,39,0	1/1:6,19:25:51.13:543,51,0	1/1:5,14:20:44.93:453,45,0	1/1:6,26:32:72.65:765,73,0	1/1:3,13:17:35.96:366,36,0	1/1:3,24:27:28.93:680,29,0	1/1:6,21:28:32.33:534,32,0	1/1:2,13:16:41.81:413,42,0	1/1:2,23:25:23.56:455,24,0	1/1:3,24:27:48.73:688,49,0	1/1:4,41:45:80.26:1024,80,0	1/1:1,7:8:12.03:128,12,0
chr10	29866196	.	CT	C	6076.26	PASS	AB=0.617;AC=44;AF=0.786;AN=56;BaseQRankSum=-1.013;DP=514;FS=1.512;HRun=13;HaplotypeScore=61.1060;InbreedingCoeff=0.2053;MQ=66.59;MQ0=0;MQRankSum=1.687;QD=12.82;ReadPosRankSum=-0.243;VQSLOD=4.9207;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,12:17:16.30:221,16,0	0/1:1,3:5:15.20:58,0,15	0/0:13,0:10:3.95:0,4,30	0/0:7,0:6:0.83:0,1,25	1/1:6,27:34:44.37:480,44,0	1/1:4,13:17:35.78:262,36,0	0/1:6,10:16:2.30:148,0,2	1/1:13,23:36:65.49:479,65,0	0/0:7,0:20:31.86:0,32,207	1/1:8,11:19:0.55:168,1,0	0/1:6,9:16:21.51:172,0,22	0/1:6,8:14:24.79:107,0,25	1/1:6,13:19:32.77:241,33,0	1/1:6,7:15:27.76:179,28,0	1/1:3,11:16:33.88:231,34,0	1/1:3,15:19:27.37:270,27,0	0/1:4,8:12:11.37:91,0,11	1/1:5,10:15:3.97:133,4,0	1/1:8,9:21:34.93:219,35,0	1/1:8,16:27:25.52:332,26,0	1/1:3,10:16:9.58:207,10,0	1/1:6,13:20:2.62:172,3,0	1/1:2,22:24:53.47:393,53,0	1/1:2,10:12:29.82:219,30,0	1/1:5,17:24:51.73:362,52,0	0/1:10,9:19:37.59:146,0,38	1/1:1,18:22:59.80:412,60,0	1/1:2,17:19:51.60:374,52,0
chr10	29867815	.	C	CTTT	12890.32	PASS	AB=0.691;AC=51;AF=0.911;AN=56;BaseQRankSum=-2.396;DP=448;FS=0.000;HRun=11;HaplotypeScore=88.4802;InbreedingCoeff=0.4183;MQ=65.59;MQ0=0;MQRankSum=-3.017;QD=29.23;ReadPosRankSum=0.303;VQSLOD=4.0644;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,6:13:34.33:529,34,0	1/1:4,5:11:33.05:461,33,0	0/1:7,0:6:4.57:5,0,59	0/0:7,0:7:13.16:0,13,118	1/1:11,8:25:63.09:918,63,0	1/1:1,13:15:39.07:644,39,0	1/1:1,10:15:33.09:555,33,0	1/1:22,6:30:32.53:649,33,0	0/1:5,0:15:10.07:10,0,21	1/1:12,5:19:45.09:669,45,0	1/1:15,9:25:60.78:796,61,0	1/1:5,5:10:30.07:451,30,0	1/1:3,6:10:27.06:445,27,0	1/1:3,5:8:21.06:304,21,0	0/1:6,0:21:12.88:36,0,13	1/1:4,7:11:33.03:506,33,0	1/1:4,0:15:12.46:27,12,0	1/1:2,0:17:16.11:35,16,0	1/1:10,2:14:23.06:277,23,0	1/1:11,11:25:66:915,66,0	1/1:5,3:8:18.05:275,18,0	1/1:3,11:14:32.98:511,33,0	1/1:17,10:27:66.16:1006,66,0	1/1:0,5:5:9.03:149,9,0	1/1:11,6:19:45.08:662,45,0	1/1:17,6:24:63.05:887,63,0	1/1:19,10:30:64.28:831,64,0	1/1:1,5:6:18.06:338,18,0
chr10	29867890	.	T	TA	11358.09	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-9.366;DP=457;FS=2.770;HRun=7;HaplotypeScore=49.6940;InbreedingCoeff=0.9918;MQ=76.34;MQ0=0;MQRankSum=-3.637;QD=30.53;ReadPosRankSum=2.566;VQSLOD=5.2690;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,17:17:48.15:576,48,0	1/1:0,5:5:15.05:181,15,0	0/0:10,0:10:24.02:0,24,226	0/0:10,0:10:22.57:0,23,182	1/1:6,22:28:60.18:723,60,0	1/1:0,13:14:39.12:471,39,0	1/1:2,9:11:24.07:290,24,0	1/1:2,23:25:66.14:768,66,0	0/0:13,0:13:36.06:0,36,348	1/1:2,22:24:63.16:735,63,0	1/1:2,18:20:51.16:616,51,0	1/1:1,9:10:30.08:352,30,0	1/1:3,16:19:48.15:579,48,0	1/1:1,18:19:54.17:652,54,0	0/0:18,0:18:51.08:0,51,492	1/1:1,12:13:36.11:435,36,0	0/0:16,0:16:39.06:0,39,377	0/0:18,0:18:53.84:0,54,497	1/1:2,16:18:22.18:551,22,0	1/1:2,19:21:57.14:673,57,0	1/1:0,12:12:33.10:399,33,0	1/1:5,8:13:27.07:314,27,0	1/1:3,17:20:48.15:580,48,0	1/1:0,7:7:21.06:254,21,0	1/1:3,17:20:45.14:544,45,0	1/1:3,13:16:39.12:471,39,0	1/1:6,28:34:81.25:978,81,0	1/1:1,5:6:18.06:217,18,0
chr10	29869242	.	G	GGTGTGT	18609.01	PASS	AB=0.666;AC=43;AF=0.768;AN=56;BaseQRankSum=-9.218;DP=812;FS=10.739;HRun=0;HaplotypeScore=195.9972;InbreedingCoeff=0.6410;MQ=62.52;MQ0=12;MQRankSum=-7.515;QD=29.59;ReadPosRankSum=-0.786;VQSLOD=3.5859;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:19,12:38:21.22:874,0,21	1/1:2,9:12:11.88:387,12,0	0/0:52,0:29:26.35:0,26,384	0/0:46,0:27:27.01:0,27,330	1/1:5,7:18:11.31:324,11,0	1/1:7,16:30:47.42:1355,47,0	1/1:16,16:39:49.30:1493,49,0	1/1:31,0:33:39.06:715,39,0	0/0:8,0:26:20.19:0,20,130	1/1:21,16:42:72.67:1873,73,0	1/1:4,5:11:9.03:209,9,0	1/1:11,16:33:48.12:1155,48,0	1/1:6,14:22:39.13:1061,39,0	1/1:11,11:30:36.11:810,36,0	0/0:12,0:31:22.85:0,23,156	1/1:7,16:28:44.42:1337,44,0	0/1:14,0:36:34.96:35,0,141	0/0:16,0:27:12.23:0,12,81	1/1:13,6:19:27.07:688,27,0	1/1:4,9:15:15.05:479,15,0	1/1:16,10:31:9.02:202,9,0	1/1:7,18:30:27.98:794,28,0	1/1:13,11:28:30.10:783,30,0	1/1:20,8:30:12.04:321,12,0	1/1:8,9:23:23.34:578,23,0	1/1:12,18:33:63.21:1648,63,0	0/1:21,13:36:14.45:1406,0,14	1/1:5,0:6:6.02:83,6,0
chr10	29870234	.	A	AG	22580.26	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-7.942;DP=779;FS=1.408;HRun=2;HaplotypeScore=104.4667;InbreedingCoeff=0.9990;MQ=92.75;MQ0=0;MQRankSum=-7.190;QD=37.89;ReadPosRankSum=3.837;VQSLOD=4.8851;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,35:37:99:1462,102,0	1/1:0,9:9:27.09:389,27,0	0/0:29,0:29:82.78:0,83,977	0/0:37,0:36:83.09:0,83,1013	1/1:2,24:26:69.23:990,69,0	1/1:1,17:18:51.17:734,51,0	1/1:0,25:25:66.22:950,66,0	1/1:1,40:40:99:1595,117,0	0/0:24,0:24:63.18:0,63,768	1/1:1,28:28:81.26:1147,81,0	1/1:0,21:21:60.20:863,60,0	1/1:4,29:33:78.26:1123,78,0	1/1:0,24:24:63.21:906,63,0	1/1:1,25:26:66.22:950,66,0	0/0:38,0:37:99:0,108,1325	1/1:2,29:31:72.24:1036,72,0	0/0:28,0:28:81.19:0,81,961	0/0:27,0:27:78.22:0,78,951	1/1:4,23:27:69.22:979,69,0	1/1:1,32:33:93.31:1339,93,0	1/1:4,28:32:72.24:1037,72,0	1/1:1,31:32:90.30:1295,90,0	1/1:4,32:36:90.05:1275,90,0	1/1:0,24:24:63.21:907,63,0	1/1:0,23:23:60.20:864,60,0	1/1:2,31:33:90.28:1275,90,0	1/1:1,27:28:81.27:1163,81,0	1/1:1,7:8:21.07:302,21,0
chr10	29872586	.	AT	A	5191.63	PASS	AB=0.779;AC=44;AF=0.786;AN=56;BaseQRankSum=5.216;DP=451;FS=0.000;HRun=13;HaplotypeScore=49.6867;InbreedingCoeff=0.6812;MQ=74.37;MQ0=0;MQRankSum=0.258;QD=13.92;ReadPosRankSum=0.014;VQSLOD=5.0816;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,9:16:25.83:181,26,0	1/1:0,6:6:17.90:131,18,0	0/0:14,0:14:11.89:0,12,93	0/1:10,0:8:40.77:46,0,41	1/1:8,15:24:40.72:290,41,0	0/1:4,15:19:13.63:240,0,14	1/1:3,11:14:3.61:190,4,0	1/1:6,23:29:52.09:484,52,0	1/1:4,9:13:26.81:197,27,0	1/1:5,10:16:28.83:203,29,0	1/1:3,11:15:22.86:159,23,0	1/1:0,13:13:38.78:285,39,0	1/1:1,16:17:44.74:328,45,0	1/1:4,13:17:23.85:175,24,0	0/0:20,2:22:17.13:0,17,318	1/1:1,8:9:23.86:175,24,0	0/0:18,2:20:13.27:0,13,452	0/0:20,0:20:48.08:0,48,467	1/1:8,12:19:9.51:233,10,0	1/1:7,11:18:34.82:246,35,0	1/1:2,15:17:35.78:263,36,0	0/0:2,0:2:0:0,0,0	1/1:5,10:15:20.82:153,21,0	1/1:4,11:15:26.81:197,27,0	1/1:6,8:14:23.85:175,24,0	1/1:3,13:17:34.78:245,35,0	1/1:5,19:25:55.68:400,56,0	1/1:1,12:13:26.84:197,27,0
chr10	29873051	.	A	ATTT	7059.90	PASS	AB=0.589;AC=48;AF=0.857;AN=56;BaseQRankSum=-2.077;DP=657;FS=15.966;HRun=12;HaplotypeScore=94.8528;InbreedingCoeff=0.4165;MQ=67.09;MQ0=1;MQRankSum=-3.659;QD=11.15;ReadPosRankSum=0.507;VQSLOD=1.2199;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:34:40.47:304,40,0	1/1:2,0:12:18.38:120,18,0	0/0:14,0:15:20.68:0,21,189	0/0:9,0:9:9.56:0,10,120	1/1:4,1:32:60.93:477,61,0	1/1:3,1:24:22.19:193,22,0	0/1:9,0:33:17.31:275,0,17	1/1:11,0:33:60.26:466,60,0	1/1:4,1:26:28.16:252,28,0	1/1:5,1:32:71.97:745,72,0	1/1:4,0:17:23.83:173,24,0	1/1:8,1:31:5.22:269,5,0	1/1:6,0:27:28.42:195,28,0	1/1:3,1:28:28.09:202,28,0	1/1:8,14:26:29.94:380,30,0	0/1:9,1:24:2.48:208,0,2	1/1:6,12:20:31.71:420,32,0	1/1:10,9:20:20.96:300,21,0	1/1:8,1:19:15.15:241,15,0	0/1:2,2:15:2.49:238,0,2	1/1:5,3:31:33.69:333,34,0	1/1:4,0:19:14.41:94,14,0	0/1:6,0:15:42.02:112,0,42	1/1:2,0:25:19.18:140,19,0	1/1:5,0:31:17.46:136,17,0	1/1:1,0:19:50.81:419,51,0	1/1:7,0:29:41.10:297,41,0	1/1:3,0:10:8.97:69,9,0
chr10	29873177	.	G	GCTCAGGATTGATTACTTGAA	32345.15	PASS	AB=0.750;AC=52;AF=0.963;AN=54;BaseQRankSum=-0.106;DP=284;FS=35.428;HRun=0;HaplotypeScore=302.3696;InbreedingCoeff=-0.0507;MQ=71.63;MQ0=0;MQRankSum=-3.037;QD=113.89;ReadPosRankSum=2.071;VQSLOD=3.1715;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:16:36.12:1999,36,0	1/1:2,0:2:3.01:243,3,0	0/1:6,0:9:55.83:749,0,56	0/1:6,1:9:7.59:1019,0,8	1/1:12,0:12:21.06:1244,21,0	1/1:11,0:11:18.06:1260,18,0	1/1:8,0:8:12.02:349,12,0	1/1:13,0:13:36.11:1569,36,0	1/1:13,0:13:24.08:1699,24,0	1/1:16,0:16:39.13:1750,39,0	1/1:10,0:10:18.06:1565,18,0	1/1:12,0:12:30.10:1362,30,0	1/1:7,0:7:15.05:803,15,0	1/1:12,0:12:30.10:1187,30,0	1/1:13,0:13:18.06:1166,18,0	1/1:13,0:13:27.56:1493,28,0	1/1:5,0:5:12.03:589,12,0	1/1:4,0:4:9.92:275,10,0	1/1:9,0:9:21.07:1227,21,0	1/1:11,0:11:27.09:1743,27,0	1/1:9,0:9:21.05:954,21,0	1/1:18,0:18:39.13:2144,39,0	1/1:8,0:8:21.07:1352,21,0	1/1:6,0:6:12.03:519,12,0	1/1:16,0:16:36.03:1721,36,0	1/1:6,0:6:15.05:765,15,0	1/1:16,0:16:27.09:1598,27,0	./.
chr10	29873963	.	CCAT	C	302.86	PASS	AB=1.000;AC=15;AF=0.278;AN=54;BaseQRankSum=5.604;DP=546;FS=15.199;HRun=0;HaplotypeScore=131.5111;InbreedingCoeff=0.2164;MQ=50.97;MQ0=12;MQRankSum=-4.903;QD=1.44;ReadPosRankSum=-4.197;VQSLOD=-0.6360;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:25.96:0,26,143	1/1:10,0:10:0.89:2,1,0	0/0:27,0:18:0.47:0,0,1	./.	0/1:19,0:18:6:6,0,55	0/1:25,0:25:31.81:46,0,32	0/0:20,0:19:27.56:0,28,160	0/0:28,0:27:5.80:0,6,32	0/1:17,0:17:7.59:8,0,286	0/1:22,0:22:34.21:34,0,72	0/0:14,0:13:17.68:0,18,115	0/0:15,0:15:11.54:0,12,69	0/0:25,0:25:11.68:0,12,75	0/1:20,0:20:35.53:36,0,54	1/1:27,0:27:5.95:42,6,0	1/1:16,4:20:9.03:118,9,0	0/0:18,0:18:17.31:0,17,109	0/0:13,0:13:14.50:0,14,79	1/1:19,0:15:11.96:107,12,0	0/0:21,0:21:12.39:0,12,79	0/0:39,0:35:22.85:0,23,118	0/0:11,0:10:17.53:0,18,101	0/0:17,0:17:13.73:0,14,86	0/0:19,0:19:2.80:0,3,23	0/1:18,0:18:30.88:50,0,31	0/1:13,0:13:4.05:4,0,55	0/0:18,0:18:17.84:0,18,123	0/0:4,0:4:2.90:0,3,16
chr10	29873993	.	TCATCATCATCATCATCAC	T	6576.59	PASS	AB=1.000;AC=39;AF=0.696;AN=56;BaseQRankSum=5.204;DP=477;FS=0.594;HRun=0;HaplotypeScore=211.9265;InbreedingCoeff=-0.0206;MQ=42.83;MQ0=30;MQRankSum=1.007;QD=15.22;ReadPosRankSum=0.521;VQSLOD=3.8582;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:20:22.10:324,22,0	0/1:10,0:10:13.98:106,0,14	0/0:3,0:2:4.19:0,4,21	0/0:8,0:4:5.98:0,6,65	1/1:18,0:17:23.32:337,23,0	1/1:25,0:25:34.51:541,35,0	0/1:19,0:17:18.09:125,0,18	0/0:34,0:15:26.19:0,26,225	0/1:17,0:17:32.91:33,0,595	1/1:23,0:23:37.84:475,38,0	0/1:14,0:13:10.12:181,0,10	1/1:13,0:13:2.38:101,2,0	1/1:18,0:18:3.16:165,3,0	0/1:19,0:19:2.84:615,0,3	1/1:0,26:26:6.02:305,6,0	0/1:14,0:14:71.03:71,0,130	1/1:17,0:17:34.81:398,35,0	1/1:13,0:13:29.97:506,30,0	0/1:16,0:11:0.05:364,0,0	0/1:21,0:20:29.60:420,0,30	0/1:38,0:34:68.07:119,0,68	0/1:11,0:10:13.08:164,0,13	1/1:11,0:11:9.61:247,10,0	1/1:18,0:18:4.43:47,4,0	0/1:17,0:16:43.70:503,0,44	1/1:14,0:11:2.78:245,3,0	1/1:14,0:14:16.23:110,16,0	1/1:5,0:5:10.99:74,11,0
chr10	29873999	.	TCATCATCATCACCATCAC	T	11643.50	PASS	AB=1.000;AC=49;AF=0.875;AN=56;BaseQRankSum=-4.051;DP=470;FS=13.258;HRun=0;HaplotypeScore=190.8911;InbreedingCoeff=0.2150;MQ=43.56;MQ0=31;MQRankSum=1.967;QD=25.26;ReadPosRankSum=-0.060;VQSLOD=3.0287;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:20:42.01:647,42,0	1/1:1,9:10:3.01:129,3,0	0/0:3,0:2:0.47:0,0,1	0/0:6,0:2:3.01:0,3,57	1/1:17,2:18:41.57:688,42,0	1/1:19,3:22:47.92:869,48,0	1/1:22,0:20:5.92:477,6,0	1/1:32,0:13:14.89:166,15,0	0/1:15,0:15:99:105,0,405	1/1:22,1:23:63.05:1041,63,0	1/1:15,0:13:29.71:421,30,0	1/1:13,0:13:26.94:297,27,0	1/1:15,0:15:35.86:440,36,0	1/1:15,2:17:35.82:914,36,0	1/1:26,0:26:6.02:269,6,0	0/1:13,0:13:38.56:172,0,39	0/1:16,0:16:16.87:118,0,17	1/1:15,0:15:13.42:270,13,0	1/1:14,0:9:11.66:476,12,0	1/1:18,2:19:39.06:753,39,0	1/1:40,0:36:44.71:575,45,0	1/1:13,0:12:26.98:417,27,0	1/1:9,1:10:23.93:419,24,0	1/1:17,0:17:11.89:139,12,0	1/1:11,4:14:30:735,30,0	1/1:15,1:13:36.01:600,36,0	1/1:17,0:17:29.93:342,30,0	1/1:5,0:5:12.04:164,12,0
chr10	29874008	.	TCACCATCAC	T	7069.80	PASS	AB=0.997;AC=31;AF=0.554;AN=56;BaseQRankSum=-2.274;DP=473;FS=3.450;HRun=0;HaplotypeScore=156.7196;InbreedingCoeff=-0.5416;MQ=44.44;MQ0=31;MQRankSum=1.490;QD=15.96;ReadPosRankSum=3.143;VQSLOD=4.1049;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:21:99:235,0,231	1/1:9,0:9:3.01:48,3,0	0/1:2,0:2:5.98:6,0,44	0/1:6,0:4:13.36:13,0,49	0/1:20,0:19:20.18:422,0,20	0/1:20,0:20:61.74:522,0,62	0/1:23,0:21:99:257,0,278	1/1:24,9:13:7.64:280,8,0	0/1:15,0:16:99:298,0,162	0/1:23,0:23:99:623,0,174	0/1:14,0:12:99:196,0,131	0/1:12,0:12:99:152,0,121	0/1:18,0:18:99:376,0,117	0/1:17,0:17:75.03:542,0,75	1/1:26,0:26:6.02:105,6,0	1/1:11,0:11:23.88:273,24,0	0/0:16,0:16:24.01:0,24,208	0/0:14,0:14:14.58:0,15,113	1/1:13,0:8:20.81:333,21,0	0/1:22,0:21:99:346,0,104	0/1:38,0:35:99:419,0,199	0/1:16,0:15:99:233,0,162	0/1:10,0:10:81.02:105,0,81	0/1:17,0:17:27.01:135,0,27	0/1:15,0:14:70.99:330,0,71	0/1:18,0:15:60.68:491,0,61	0/1:16,0:16:99:181,0,176	0/1:6,0:6:18.20:148,0,18
chr10	29874096	.	TC	T	16702.52	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=0.291;DP=541;FS=5.819;HRun=1;HaplotypeScore=123.1883;InbreedingCoeff=0.9595;MQ=75.04;MQ0=0;MQRankSum=-5.369;QD=38.05;ReadPosRankSum=3.755;VQSLOD=4.3518;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,10:14:39.09:490,39,0	1/1:0,1:1:3.01:42,3,0	0/0:23,1:24:47.06:0,47,951	0/0:15,0:15:33.08:0,33,471	1/1:2,16:18:48:570,48,0	1/1:0,21:21:60.11:794,60,0	1/1:0,20:20:51.13:690,51,0	1/1:0,27:27:75.25:1049,75,0	1/1:1,20:21:60.20:832,60,0	1/1:0,24:24:69.20:936,69,0	1/1:0,9:9:27:329,27,0	1/1:1,22:23:69.14:901,69,0	1/1:0,24:24:69.20:940,69,0	1/1:0,18:18:54.18:756,54,0	0/0:30,0:30:60.20:0,60,955	1/1:0,29:29:87.29:1214,87,0	0/0:16,0:16:35.08:0,35,500	0/0:17,0:17:35.87:0,36,542	1/1:2,17:19:57.18:781,57,0	1/1:0,21:21:60.09:769,60,0	1/1:1,16:17:38.98:456,39,0	1/1:0,20:20:60.07:768,60,0	1/1:0,18:18:54.09:702,54,0	1/1:1,12:13:30.07:398,30,0	1/1:0,17:17:51.13:688,51,0	1/1:2,20:22:66.17:884,66,0	1/1:0,35:35:99:1379,99,0	1/1:0,8:8:24.08:335,24,0
chr10	29874120	.	C	CTTT	16068.13	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=0.397;DP=502;FS=8.031;HRun=8;HaplotypeScore=122.9727;InbreedingCoeff=0.8816;MQ=52.21;MQ0=2;MQRankSum=-6.372;QD=34.48;ReadPosRankSum=2.874;VQSLOD=3.1718;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,13:17:30.10:605,30,0	1/1:0,1:1:3.01:61,3,0	0/0:20,0:15:29.87:0,30,359	0/0:15,0:12:33.08:0,33,416	1/1:6,14:20:42.08:705,42,0	1/1:8,14:22:57.09:983,57,0	1/1:6,8:14:27.09:529,27,0	1/1:20,9:30:48.09:772,48,0	1/1:4,12:17:42.10:771,42,0	1/1:6,16:22:51.14:954,51,0	1/1:4,3:8:15.05:267,15,0	1/1:4,18:23:54.18:1024,54,0	1/1:7,14:22:56.98:1045,57,0	1/1:8,7:15:29.93:511,30,0	1/1:6,1:26:24.08:345,24,0	1/1:10,20:31:69.18:1300,69,0	1/1:2,0:16:21:277,21,0	1/1:4,1:23:23.97:318,24,0	1/1:10,9:18:30.06:548,30,0	1/1:6,4:11:21.07:394,21,0	1/1:4,7:12:21.03:327,21,0	1/1:8,7:15:24.08:469,24,0	1/1:3,10:14:39.07:665,39,0	1/1:7,4:12:11.99:183,12,0	1/1:7,4:11:18.06:348,18,0	1/1:5,15:20:51.13:966,51,0	1/1:10,19:30:78.19:1400,78,0	1/1:6,4:10:20.95:303,21,0
chr10	29874325	.	AC	A	17861.65	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-5.881;DP=593;FS=4.064;HRun=2;HaplotypeScore=65.6840;InbreedingCoeff=0.9971;MQ=81.63;MQ0=0;MQRankSum=-5.933;QD=37.29;ReadPosRankSum=1.606;VQSLOD=5.6101;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,26:27:74.74:1014,75,0	1/1:0,6:6:18.06:252,18,0	0/0:23,1:24:45.29:0,45,961	0/0:15,0:15:45.15:0,45,708	1/1:0,28:28:78.26:1090,78,0	1/1:0,24:24:69.23:964,69,0	1/1:0,13:13:36.12:503,36,0	1/1:0,26:26:78.23:1068,78,0	1/1:0,21:21:51.17:713,51,0	1/1:0,26:26:72.16:963,72,0	1/1:0,24:24:66.22:923,66,0	1/1:0,19:19:45.15:628,45,0	1/1:0,19:19:54.18:754,54,0	1/1:0,16:16:45.11:607,45,0	0/0:21,0:21:60.14:0,60,923	1/1:1,22:23:63.21:876,63,0	0/0:21,0:21:63.19:0,63,981	0/0:33,0:33:93.29:0,93,1437	1/1:1,21:23:69.19:902,69,0	1/1:1,30:31:90.23:1220,90,0	1/1:0,18:18:45.15:629,45,0	1/1:0,23:23:57.19:790,57,0	1/1:0,24:24:57.19:797,57,0	1/1:0,21:21:51.17:713,51,0	1/1:0,21:21:54.18:754,54,0	1/1:0,17:16:45.14:612,45,0	1/1:0,22:22:57.19:796,57,0	1/1:0,7:7:21.07:294,21,0
chr10	29874425	.	TA	T	12182.90	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-3.706;DP=577;FS=0.966;HRun=9;HaplotypeScore=62.9720;InbreedingCoeff=0.9158;MQ=67.72;MQ0=1;MQRankSum=-5.076;QD=22.07;ReadPosRankSum=3.771;VQSLOD=5.6678;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,18:26:63.01:572,63,0	1/1:1,3:4:6:55,6,0	0/0:13,0:9:23.90:0,24,253	0/0:12,0:11:23.17:0,23,236	1/1:2,27:28:77.75:688,78,0	1/1:1,21:22:54.03:494,54,0	1/1:2,10:12:27.01:247,27,0	1/1:12,20:32:59.98:538,60,0	1/1:6,20:26:19.30:432,19,0	1/1:3,23:26:37.27:582,37,0	1/1:1,18:19:47.93:422,48,0	1/1:1,15:16:45.02:412,45,0	1/1:2,19:21:48.02:439,48,0	1/1:1,19:20:42.02:384,42,0	1/1:2,18:20:51.03:466,51,0	1/1:1,21:22:57.03:521,57,0	1/1:1,21:22:57.03:521,57,0	1/1:5,21:26:56.98:513,57,0	1/1:3,20:23:57.01:517,57,0	1/1:1,28:29:74.88:666,75,0	1/1:1,3:4:9:82,9,0	1/1:4,11:15:39:349,39,0	1/1:1,20:21:50.92:464,51,0	1/1:0,16:16:48.03:439,48,0	1/1:2,21:23:54.03:494,54,0	1/1:3,29:32:84.02:760,84,0	1/1:0,27:27:72.04:659,72,0	1/1:0,19:19:51.03:466,51,0
chr10	29874871	.	T	TTGTGTGTG	15364.74	PASS	AB=1.000;AC=53;AF=0.946;AN=56;BaseQRankSum=-3.241;DP=691;FS=1.906;HRun=0;HaplotypeScore=200.9163;InbreedingCoeff=0.4532;MQ=60.41;MQ0=28;MQRankSum=0.321;QD=23.78;ReadPosRankSum=2.797;VQSLOD=4.2111;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:22,5:29:13.47:377,13,0	1/1:3,1:7:9.03:344,9,0	0/1:60,0:24:1.74:2,0,16	0/0:44,0:19:2.05:0,2,28	1/1:22,0:30:12.04:411,12,0	1/1:18,6:24:18.05:641,18,0	1/1:14,7:25:21.06:706,21,0	1/1:27,0:26:21.07:451,21,0	1/1:14,0:21:15.05:521,15,0	1/1:20,4:23:33.11:953,33,0	1/1:7,6:14:9.03:370,9,0	1/1:19,11:28:20.16:854,20,0	1/1:15,7:23:15.94:501,16,0	1/1:14,4:19:14.90:538,15,0	1/1:13,1:18:24.08:845,24,0	1/1:14,15:30:33.11:1239,33,0	1/1:14,0:14:14.05:295,14,0	1/1:11,0:14:18.06:434,18,0	1/1:18,2:20:14.26:386,14,0	1/1:16,4:21:21.07:784,21,0	1/1:14,9:23:3.90:125,4,0	1/1:18,5:28:15.05:614,15,0	1/1:14,10:25:17.72:739,18,0	1/1:18,6:26:14.82:557,15,0	1/1:16,4:21:12.04:490,12,0	1/1:13,1:20:30.10:719,30,0	1/1:16,6:27:33.11:1179,33,0	1/1:9,1:12:8.65:291,9,0
chr10	29875899	.	T	TTTTGGC	4003.19	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-1.830;DP=670;FS=3.864;HRun=0;HaplotypeScore=168.1828;InbreedingCoeff=0.9972;MQ=92.36;MQ0=0;MQRankSum=-9.843;QD=64.57;ReadPosRankSum=-1.273;VQSLOD=3.8805;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:81.27:0,81,1678	0/0:10,0:10:21.07:0,21,434	0/0:31,0:31:51.15:0,51,948	0/0:28,0:28:47.99:0,48,867	0/0:27,0:27:69.24:0,69,1480	0/0:26,0:26:63.22:0,63,1311	0/0:13,0:13:36.12:0,36,717	0/0:48,0:48:63.18:0,63,1155	0/0:19,0:19:36.12:0,36,772	0/0:32,0:32:75.25:0,75,1573	0/0:21,0:21:51.18:0,51,1081	0/0:18,0:18:39.13:0,39,814	0/0:20,0:20:42.13:0,42,845	0/0:13,0:13:30.10:0,30,644	1/1:8,18:26:60.20:1937,60,0	0/0:14,0:14:42.14:0,42,843	1/1:12,11:23:39.13:1151,39,0	1/1:6,7:13:30.10:915,30,0	0/0:23,0:23:33.10:0,33,610	0/0:19,0:19:45.15:0,45,962	0/0:39,0:39:99:0,99,2019	0/0:23,0:23:51.17:0,51,1055	0/0:24,0:24:57.20:0,57,1223	0/0:27,0:27:63.20:0,63,1290	0/0:27,0:27:72.25:0,72,1510	0/0:31,0:31:72.23:0,72,1449	0/0:25,0:25:63.19:0,63,1287	0/0:11,0:11:24.08:0,24,490
chr10	29875965	.	CT	C	1726.79	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=10.998;DP=590;FS=20.168;HRun=6;HaplotypeScore=59.2784;InbreedingCoeff=0.9402;MQ=71.66;MQ0=0;MQRankSum=-2.604;QD=26.57;ReadPosRankSum=1.303;VQSLOD=1.9690;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:84.27:0,84,1102	0/0:12,0:12:33.11:0,33,434	0/0:14,0:14:29.75:0,30,350	0/0:6,0:6:3.01:0,3,39	0/0:28,0:28:75.24:0,75,985	0/0:20,0:20:60.20:0,60,790	0/0:26,0:26:75.24:0,75,979	0/0:31,0:31:78.25:0,78,1022	0/0:21,0:21:57.13:0,57,713	0/0:29,0:29:78.25:0,78,1026	0/0:22,0:22:63.19:0,63,814	0/0:20,0:20:60.20:0,60,789	0/0:20,0:20:60.19:0,60,785	0/0:12,0:12:36.12:0,36,474	1/1:1,20:21:57.14:612,57,0	0/0:18,0:18:51.17:0,51,671	1/1:0,25:25:66.16:709,66,0	1/1:0,19:19:51.13:548,51,0	0/0:17,0:17:48.16:0,48,629	0/0:17,0:17:51.17:0,51,671	0/0:22,0:22:60.16:0,60,759	0/0:15,0:15:42.13:0,42,540	0/0:19,0:19:57.17:0,57,733	0/0:18,0:18:45.62:0,46,591	0/0:37,0:37:99:0,111,1449	0/0:31,0:31:81.25:0,81,1040	0/0:31,0:31:81.25:0,81,1052	0/0:10,0:10:30.06:0,30,359
chr10	29877013	.	CT	C	1899.05	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.664;DP=675;FS=0.526;HRun=2;HaplotypeScore=64.7990;InbreedingCoeff=0.9994;MQ=87.39;MQ0=0;MQRankSum=-0.750;QD=32.74;ReadPosRankSum=1.479;VQSLOD=3.5146;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,114,1667	0/0:9,0:9:27.09:0,27,405	0/0:26,0:26:69.18:0,69,943	0/0:24,0:24:57.11:0,57,756	0/0:26,0:26:75.25:0,75,1123	0/0:29,0:29:87.27:0,87,1280	0/0:39,0:39:99:0,117,1647	0/0:33,0:33:99:0,99,1425	0/0:26,0:26:78.26:0,78,1167	0/0:29,0:29:84.28:0,84,1256	0/0:15,0:15:39.10:0,39,526	0/0:33,0:33:99:0,99,1444	0/0:15,0:15:45.12:0,45,629	0/0:29,0:29:87.27:0,87,1263	1/1:0,15:15:39.06:485,39,0	0/0:21,0:21:63.21:0,63,944	1/1:0,26:26:75.24:973,75,0	1/1:0,17:17:45.15:584,45,0	0/0:25,0:25:75.25:0,75,1105	0/0:29,0:29:84.28:0,84,1243	0/0:31,0:31:87.28:0,87,1282	0/0:25,0:25:69.21:0,69,1012	0/0:23,0:23:69.20:0,69,992	0/0:23,0:23:66.21:0,66,966	0/0:12,0:12:36.12:0,36,538	0/0:21,0:21:60.17:0,60,875	0/0:24,0:23:69.22:0,69,1005	0/0:11,0:11:33.11:0,33,494
chr10	29877958	.	TG	T	1332.60	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=6.425;DP=616;FS=3.801;HRun=9;HaplotypeScore=62.9153;InbreedingCoeff=0.9824;MQ=77.83;MQ0=0;MQRankSum=-3.198;QD=20.19;ReadPosRankSum=2.123;VQSLOD=4.4546;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:90.25:0,90,1028	0/0:13,0:13:30.08:0,30,337	0/0:24,0:22:23.30:0,23,430	0/0:14,0:14:24.02:0,24,234	0/0:25,0:25:57.15:0,57,645	0/0:31,0:31:84.21:0,84,941	0/0:21,1:22:29.71:0,30,596	0/0:32,1:33:35.71:0,36,658	0/0:17,0:18:50.98:0,51,568	0/0:15,0:15:33.10:0,33,381	0/0:11,0:11:27.07:0,27,302	0/0:25,0:25:75.21:0,75,855	0/0:28,1:29:41.75:0,42,734	0/0:23,1:24:29.75:0,30,585	1/1:3,28:31:81.04:741,81,0	0/0:18,0:17:51.14:0,51,579	1/1:2,14:16:42.02:384,42,0	1/1:4,15:19:38.99:350,39,0	0/0:15,1:16:14.62:0,15,401	0/0:19,1:20:17.66:0,18,447	0/0:34,0:34:81.09:0,81,904	0/0:19,0:19:42.09:0,42,471	0/0:18,0:18:42.10:0,42,467	0/0:20,0:20:48.11:0,48,535	0/0:24,0:24:72.18:0,72,804	0/0:20,0:20:35.99:0,36,386	0/0:37,0:37:53.74:0,54,839	0/0:6,0:6:15.03:0,15,163
chr10	29879934	.	AGTGTGTGT	A	3437.37	PASS	AB=0.714;AC=37;AF=0.740;AN=50;BaseQRankSum=1.490;DP=600;FS=0.000;HRun=0;HaplotypeScore=144.6644;InbreedingCoeff=0.5860;MQ=64.51;MQ0=19;MQRankSum=-3.779;QD=10.08;ReadPosRankSum=-1.849;VQSLOD=2.4011;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:22,5:27:3.01:75,3,0	1/1:3,1:4:3.01:75,3,0	./.	0/0:39,0:22:3.01:0,3,31	1/1:13,5:19:9.03:206,9,0	1/1:11,1:13:6.02:131,6,0	1/1:9,3:12:2.80:56,3,0	0/0:27,0:25:0:0,0,0	0/0:18,0:22:18.01:0,18,226	1/1:11,4:15:2.51:74,3,0	1/1:2,6:8:9.03:199,9,0	1/1:14,8:23:9.03:206,9,0	1/1:16,2:18:6.02:131,6,0	1/1:16,9:25:18.06:420,18,0	0/0:31,0:31:15.05:0,15,486	1/1:17,4:20:12.04:300,12,0	0/0:29,0:29:12.01:0,12,346	0/0:13,0:13:7.84:0,8,231	./.	1/1:11,7:20:15.05:336,15,0	./.	1/1:10,6:18:15.05:336,15,0	0/1:6,4:10:0:0,0,0	1/1:26,8:34:12.04:220,12,0	1/1:8,8:17:14.90:261,15,0	1/1:15,0:17:4.84:110,5,0	1/1:18,4:22:3.01:75,3,0	1/1:11,6:17:10.28:228,10,0
chr10	29879979	.	G	GTGTGTGTGTA	823.96	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=2.701;DP=600;FS=10.434;HRun=0;HaplotypeScore=168.3584;InbreedingCoeff=0.8878;MQ=65.03;MQ0=29;MQRankSum=-3.953;QD=10.43;ReadPosRankSum=-1.623;VQSLOD=1.5860;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:56.87:0,57,508	0/0:3,0:3:6:0,6,105	0/0:55,0:25:57.82:0,58,607	0/0:50,0:19:45.38:0,45,440	0/0:20,0:20:47.91:0,48,549	0/0:20,0:20:50.94:0,51,529	0/0:15,0:13:20.97:0,21,222	0/0:20,0:20:53.68:0,54,459	0/0:19,0:19:28.03:0,28,471	0/0:23,0:23:62:0,62,590	0/0:16,0:16:25.17:0,25,305	0/0:19,0:19:30.97:0,31,418	0/0:8,0:8:23.88:0,24,214	0/0:16,0:16:32.87:0,33,466	1/1:9,11:28:9.03:421,9,0	0/0:15,0:14:35.64:0,36,473	1/1:5,22:37:9.03:310,9,0	1/1:3,0:14:9.24:217,9,0	0/0:17,0:15:41.79:0,42,333	0/0:22,0:22:50.54:0,51,662	0/0:37,0:37:57.78:0,58,452	0/0:16,0:16:33.01:0,33,541	0/0:16,0:16:32.53:0,33,259	0/0:32,0:31:48.25:0,48,480	0/0:20,0:20:47.87:0,48,606	0/0:13,0:12:35.93:0,36,388	0/0:10,0:10:14.98:0,15,177	0/0:10,0:10:17.96:0,18,302
chr10	29881158	.	TA	T	980.98	PASS	AB=0.703;AC=6;AF=0.107;AN=56;BaseQRankSum=7.762;DP=515;FS=1.224;HRun=9;HaplotypeScore=52.7175;InbreedingCoeff=0.6707;MQ=73.08;MQ0=0;MQRankSum=-0.635;QD=16.08;ReadPosRankSum=2.479;VQSLOD=3.7549;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:48.11:0,48,540	0/0:15,0:15:45.12:0,45,509	0/0:15,0:14:18.74:0,19,240	0/0:10,0:10:9.86:0,10,129	0/0:26,0:26:69.20:0,69,796	0/0:21,0:21:57.15:0,57,639	0/0:12,0:12:33.09:0,33,369	0/0:32,0:32:72.17:0,72,797	0/0:20,0:20:60.18:0,60,692	0/0:28,0:28:72.20:0,72,814	0/0:22,0:22:63.16:0,63,709	0/0:11,0:11:24.07:0,24,277	0/0:9,0:9:24.06:0,24,267	0/0:21,0:21:54.14:0,54,612	1/1:1,19:20:54.03:494,54,0	0/0:19,0:19:51.15:0,51,588	1/1:1,15:16:42.02:384,42,0	0/1:3,11:14:4.60:217,0,5	0/0:21,0:21:54.11:0,54,585	0/0:32,0:32:87.18:0,87,960	0/0:7,0:7:21.05:0,21,233	0/0:19,0:19:51.09:0,51,564	0/0:21,0:21:54.16:0,54,623	0/0:10,0:10:30.09:0,30,346	0/0:6,0:26:74.84:0,75,459	0/0:14,0:14:42.10:0,42,461	0/0:23,0:23:69.19:0,69,786	0/1:9,2:11:21.85:22,0,267
chr10	29882308	.	TTGTGTGTGTGTGTGTGTG	T	14123.02	PASS	AB=0.622;AC=44;AF=0.786;AN=56;BaseQRankSum=2.477;DP=612;FS=53.055;HRun=0;HaplotypeScore=233.0718;InbreedingCoeff=0.5556;MQ=64.49;MQ0=14;MQRankSum=-2.244;QD=29.55;ReadPosRankSum=1.559;VQSLOD=2.3579;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:22,1:24:8.23:299,8,0	1/1:5,8:13:9.92:332,10,0	0/0:35,0:15:6.02:0,6,82	0/0:44,0:20:5.98:0,6,51	1/1:6,21:27:26.88:907,27,0	1/1:17,16:30:9.03:440,9,0	1/1:9,14:23:2.84:146,3,0	1/1:12,10:22:15.62:270,16,0	1/1:3,14:16:26.64:1319,27,0	1/1:8,8:16:20.99:681,21,0	1/1:6,14:19:21.50:790,21,0	1/1:7,18:25:21.07:1027,21,0	0/1:7,14:22:8.15:1207,0,8	1/1:6,12:18:9.03:436,9,0	0/0:18,0:18:9.01:0,9,260	1/1:1,19:20:18.06:841,18,0	0/0:26,0:26:32.54:0,33,620	0/0:11,0:11:20.45:0,20,457	1/1:10,7:17:20.83:495,21,0	1/1:7,14:22:14.97:459,15,0	1/1:17,0:17:3.01:99,3,0	1/1:5,7:12:12.04:586,12,0	1/1:8,10:18:3.01:147,3,0	1/1:12,11:23:6.02:293,6,0	0/1:11,13:23:19.81:569,0,20	1/1:5,24:29:59.76:1615,60,0	1/1:8,20:28:16.46:1019,16,0	1/1:2,6:8:3.01:147,3,0
chr10	29882331	.	T	TGA	693.44	PASS	AB=0.984;AC=16;AF=0.286;AN=56;BaseQRankSum=1.857;DP=527;FS=0.000;HRun=0;HaplotypeScore=155.2870;InbreedingCoeff=-0.3140;MQ=49.04;MQ0=17;MQRankSum=0.750;QD=2.60;ReadPosRankSum=5.178;VQSLOD=2.2733;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:25,1:26:34.76:35,0,215	0/1:9,0:9:9.27:9,0,21	0/0:15,0:4:5.86:0,6,62	0/0:23,0:3:2.60:0,3,29	0/1:27,0:26:30.95:31,0,100	0/0:21,1:19:13.49:0,13,83	0/1:17,0:17:17.94:27,0,18	0/1:21,0:19:99:101,0,161	0/0:20,0:19:36.80:0,37,218	0/1:13,0:13:21.03:21,0,91	0/1:19,0:18:20.14:20,0,87	0/0:27,0:27:40.54:0,41,260	0/1:20,0:20:20.17:20,0,121	0/1:16,0:16:30.02:55,0,30	0/0:20,0:20:17.97:0,18,146	0/1:23,0:23:75.28:75,0,124	0/0:23,0:22:44:0,44,304	0/0:16,0:14:32.49:0,32,220	0/1:10,0:10:58.80:123,0,59	0/0:21,0:21:11.35:0,11,149	0/1:13,4:16:38.51:39,0,75	0/0:12,0:12:1.99:0,2,88	0/0:14,0:13:11.58:0,12,84	0/1:15,0:15:10.78:11,0,46	0/0:21,0:20:30.25:0,30,206	0/1:28,0:28:99:272,0,173	0/0:25,0:25:28.03:0,28,177	1/1:6,0:6:2.22:7,2,0
chr10	29882371	.	A	AGT	1482.27	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=2.412;DP=598;FS=17.417;HRun=0;HaplotypeScore=153.7029;InbreedingCoeff=0.8980;MQ=53.86;MQ0=13;MQRankSum=-1.161;QD=26.00;ReadPosRankSum=2.313;VQSLOD=3.7291;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:78.24:0,78,1009	0/0:9,0:9:18.05:0,18,222	0/0:12,0:4:6.49:0,6,77	0/0:18,0:7:14.83:0,15,197	0/0:27,0:27:60.16:0,60,768	0/0:18,0:18:33.11:0,33,434	0/0:18,0:18:33.02:0,33,395	0/0:23,0:22:45.13:0,45,566	0/0:21,0:21:60.20:0,60,788	0/0:18,0:18:48.15:0,48,623	0/0:28,0:27:57.18:0,57,728	0/0:34,0:32:69.22:0,69,893	0/0:22,0:23:52.98:0,53,666	0/0:24,0:24:46.39:0,46,587	1/1:7,16:23:35.99:605,36,0	0/0:28,0:28:51.11:0,51,670	1/1:12,11:22:45.14:658,45,0	1/1:4,7:11:21.56:361,22,0	0/0:14,0:11:24.08:0,24,315	0/0:25,0:25:63.17:0,63,805	0/0:18,0:17:21.07:0,21,275	0/0:17,0:17:36.12:0,36,470	0/0:17,0:17:33.11:0,33,433	0/0:16,0:16:21.06:0,21,264	0/0:36,0:36:87.27:0,87,1129	0/0:35,0:34:86.12:0,86,1079	0/0:23,0:23:48.01:0,48,613	0/0:6,0:6:3.01:0,3,38
chr10	29882432	.	GTT	G	1395.32	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.642;DP=516;FS=3.598;HRun=10;HaplotypeScore=64.9827;InbreedingCoeff=0.9587;MQ=69.03;MQ0=0;MQRankSum=-1.098;QD=26.83;ReadPosRankSum=1.991;VQSLOD=3.7850;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:84.23:0,84,1255	0/0:9,0:9:21.07:0,21,333	0/0:8,0:8:17.55:0,18,246	0/0:8,0:8:8.09:0,8,121	0/0:19,0:19:57.18:0,57,877	0/0:15,0:15:42.14:0,42,667	0/0:13,0:13:36.11:0,36,548	0/0:28,0:29:72.23:0,72,1102	0/0:11,0:11:30.08:0,30,431	0/0:25,0:26:68.71:0,69,1029	0/0:33,0:33:93.32:0,93,1475	0/0:18,0:18:42.14:0,42,667	0/0:20,0:20:54.18:0,54,857	0/0:22,0:22:54.18:0,54,836	1/1:3,10:13:33.08:368,33,0	0/0:18,0:18:45.13:0,45,688	1/1:2,23:25:69.18:769,69,0	1/1:2,12:14:36.10:401,36,0	0/0:15,0:15:42.14:0,42,662	0/0:36,0:36:99:0,99,1530	0/0:8,0:8:24.08:0,24,381	0/0:7,0:9:23.56:0,24,322	0/0:18,0:18:51.17:0,51,805	0/0:17,0:17:45.14:0,45,690	0/0:30,0:31:78.27:0,78,1221	0/0:22,0:22:57.18:0,57,884	0/0:19,0:19:54.16:0,54,830	0/0:5,0:5:12.04:0,12,190
chr10	29883052	.	GAGAGAGAGAGAA	G	320.19	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=2.676;DP=527;FS=6.376;HRun=0;HaplotypeScore=150.1793;InbreedingCoeff=0.7639;MQ=52.15;MQ0=30;MQRankSum=-1.325;QD=4.33;ReadPosRankSum=0.810;VQSLOD=2.0242;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:54.27:0,54,481	0/0:6,0:6:15.01:0,15,169	0/0:29,0:10:30.05:0,30,320	0/0:39,0:14:36.75:0,37,385	0/0:15,0:15:17.98:0,18,155	0/0:19,0:17:44.81:0,45,475	0/0:17,0:17:36.38:0,36,301	0/0:31,0:31:74.73:0,75,645	0/0:14,0:14:18.03:0,18,341	0/0:12,0:12:32.57:0,33,307	0/0:10,0:9:17.98:0,18,183	0/0:27,0:25:43.17:0,43,462	0/0:23,0:22:58.64:0,59,627	0/0:20,0:20:45.01:0,45,586	1/1:8,16:24:2.90:17,3,0	0/1:22,0:20:9.77:10,0,180	1/1:17,0:14:26.73:210,27,0	1/1:11,0:10:20.65:218,21,0	0/0:14,0:12:32.03:0,32,284	0/0:16,0:15:15.94:0,16,236	0/0:14,0:11:20.96:0,21,207	0/0:22,0:21:31.62:0,32,267	0/0:13,0:13:32.62:0,33,276	0/0:24,0:20:48.10:0,48,892	0/0:11,0:11:20.97:0,21,204	0/0:26,0:25:67.52:0,68,678	0/0:20,0:19:43.73:0,44,514	0/0:8,0:7:18:0,18,159
chr10	29885042	.	AAAAAAAAAC	A	772.07	PASS	AB=0.991;AC=22;AF=0.393;AN=56;BaseQRankSum=-0.342;DP=619;FS=6.190;HRun=0;HaplotypeScore=194.0025;InbreedingCoeff=-0.5140;MQ=51.77;MQ0=30;MQRankSum=2.415;QD=1.79;ReadPosRankSum=-1.710;VQSLOD=1.8231;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:48,0:47:17.81:18,0,630	0/1:8,1:8:58.40:67,0,58	0/0:40,0:9:12.51:0,13,168	0/0:50,0:11:1.01:0,1,90	0/0:18,0:18:5.92:0,6,306	0/1:16,0:15:14.60:15,0,216	0/1:25,1:26:61.83:62,0,89	0/1:36,0:35:99:160,0,350	0/1:16,0:15:27.74:28,0,232	0/1:24,0:23:80.76:81,0,262	0/1:12,0:12:11.53:12,0,170	0/1:19,1:20:77.16:77,0,345	0/1:20,0:17:13.60:14,0,170	0/1:11,0:9:3.54:4,0,222	0/1:28,0:27:11.47:11,0,707	0/1:20,0:19:14.56:15,0,276	0/1:33,0:31:28.31:28,0,765	0/0:22,0:20:32.26:0,32,579	0/0:15,0:13:31.73:0,32,399	0/1:24,0:23:27.99:28,0,439	0/1:9,0:8:8.24:8,0,113	0/1:11,0:10:39.43:39,0,83	0/1:18,0:16:11.15:11,0,230	0/0:19,0:19:12.90:0,13,152	0/0:23,0:22:8.33:0,8,353	0/1:22,0:18:74.69:75,0,166	0/1:24,0:23:48.23:48,0,284	1/1:2,3:5:8.89:129,9,0
chr10	29885044	.	AAAAAAAC	A	3073.66	PASS	AB=0.979;AC=25;AF=0.446;AN=56;BaseQRankSum=-1.484;DP=602;FS=81.203;HRun=0;HaplotypeScore=162.2664;InbreedingCoeff=-0.4837;MQ=50.78;MQ0=29;MQRankSum=6.065;QD=6.61;ReadPosRankSum=0.881;VQSLOD=-0.7188;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:45,0:44:99:417,0,129	0/1:9,0:8:20.39:74,0,20	0/0:38,0:9:12.84:0,13,153	0/1:52,0:13:0.87:1,0,72	0/1:20,0:20:55.84:59,0,56	0/1:15,0:14:11.89:160,0,12	0/1:24,0:24:4.60:83,0,5	0/1:16,20:35:65.82:334,0,66	0/1:15,0:14:31.75:121,0,32	0/1:24,0:23:52.80:210,0,53	0/1:12,0:12:35:35,0,55	0/1:20,0:20:60.57:178,0,61	0/1:20,0:17:33.99:139,0,34	0/1:11,0:9:70.32:70,0,95	0/0:26,0:25:16.89:0,17,446	0/1:20,0:19:45.80:175,0,46	0/0:33,0:31:10.89:0,11,573	0/0:21,0:19:20.49:0,20,391	0/1:14,0:12:20.27:20,0,206	0/1:22,1:22:99:199,0,114	0/1:9,0:8:18.01:66,0,18	0/1:9,0:8:21.65:63,0,22	0/1:17,0:15:60.98:101,0,61	0/0:19,0:19:10.81:0,11,52	0/1:19,1:19:63.99:210,0,64	1/1:23,0:19:27.08:226,27,0	0/1:22,0:21:23.47:205,0,23	1/1:5,0:5:8.79:88,9,0
chr10	29885045	.	AAAAAAC	A	4120.56	PASS	AB=0.939;AC=35;AF=0.625;AN=56;BaseQRankSum=-2.451;DP=597;FS=78.581;HRun=0;HaplotypeScore=149.9829;InbreedingCoeff=-0.1448;MQ=50.91;MQ0=29;MQRankSum=6.700;QD=8.13;ReadPosRankSum=-0.158;VQSLOD=-0.2226;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:43,0:42:57.35:388,0,57	1/1:6,3:8:2.96:99,3,0	0/0:37,0:9:6.24:0,6,115	0/1:52,0:13:6.06:6,0,59	1/1:19,0:19:2.75:119,3,0	1/1:14,0:13:27.53:214,28,0	0/1:8,16:24:8.10:63,0,8	0/1:35,0:34:20.60:358,0,21	1/1:16,0:15:13.43:183,13,0	1/1:26,0:25:2.14:255,2,0	0/1:12,0:12:19.65:65,0,20	0/1:19,0:20:8.91:206,0,9	1/1:21,0:18:23.07:243,23,0	0/1:12,0:10:54.22:105,0,54	0/1:25,0:24:4.14:4,0,269	1/1:16,1:16:9.82:254,10,0	0/0:32,0:30:17.90:0,18,443	0/0:20,0:19:9.75:0,10,302	0/1:15,0:13:45.18:45,0,120	0/1:24,0:23:26.14:255,0,26	0/1:9,0:8:11.46:122,0,11	0/1:9,0:8:2.05:64,0,2	0/1:17,0:15:25.88:137,0,26	0/1:5,14:19:7.47:7,0,38	0/1:18,1:19:19.07:288,0,19	1/1:22,0:18:31.64:278,32,0	1/1:22,0:21:33.89:290,34,0	1/1:5,0:5:8.48:75,8,0
chr10	29885046	.	AAAAAC	A	4019.89	PASS	AB=1.000;AC=36;AF=0.643;AN=56;BaseQRankSum=-1.696;DP=578;FS=57.535;HRun=0;HaplotypeScore=138.3385;InbreedingCoeff=-0.2026;MQ=53.05;MQ0=29;MQRankSum=4.228;QD=7.85;ReadPosRankSum=0.459;VQSLOD=0.9537;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:41,0:40:60.19:353,0,60	1/1:8,0:7:4.35:99,4,0	0/0:36,0:9:6.36:0,6,84	0/1:52,0:15:8.08:8,0,76	1/1:18,0:18:14.59:139,15,0	1/1:14,0:13:28.38:232,28,0	0/1:23,0:23:12.48:32,0,12	0/1:35,0:34:43.44:306,0,43	1/1:15,0:14:9.48:187,9,0	1/1:6,19:24:21.06:301,21,0	0/1:11,0:11:1.96:61,0,2	0/1:19,0:19:26.83:157,0,27	1/1:20,0:17:25.75:220,26,0	0/1:12,0:10:3.05:115,0,3	0/1:23,0:23:41.32:41,0,149	1/1:17,0:16:11.49:260,11,0	0/0:27,0:28:6.92:0,7,315	0/1:20,0:18:17.12:17,0,238	0/1:14,0:12:48.37:48,0,60	0/1:24,0:23:7.60:222,0,8	0/1:9,0:8:5.97:122,0,6	0/1:9,0:8:12.29:64,0,12	0/1:16,0:14:23.83:127,0,24	0/1:19,0:19:5.05:5,0,32	0/1:19,0:18:6.46:246,0,6	1/1:22,0:18:26.78:276,27,0	1/1:21,0:20:40.62:310,41,0	1/1:5,0:5:8.63:71,9,0
chr10	29885050	.	AC	A	3968.24	PASS	AB=0.998;AC=38;AF=0.679;AN=56;BaseQRankSum=-5.974;DP=552;FS=36.244;HRun=2;HaplotypeScore=107.0654;InbreedingCoeff=0.3300;MQ=54.41;MQ0=27;MQRankSum=6.547;QD=9.34;ReadPosRankSum=-1.523;VQSLOD=-0.7030;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:41,0:40:28.18:383,28,0	0/1:8,0:7:13.21:15,0,13	0/0:27,0:9:12.15:0,12,106	0/1:48,1:16:12.56:13,0,34	1/1:17,0:17:24.23:159,24,0	1/1:16,0:15:42.73:310,43,0	0/0:23,0:23:14.47:0,14,52	1/1:28,0:27:12.51:282,13,0	1/1:15,0:14:30.16:224,30,0	1/1:23,0:22:24.56:299,25,0	0/1:10,0:10:19.67:32,0,20	1/1:17,0:17:27.73:223,28,0	1/1:19,0:16:28.80:211,29,0	0/1:11,0:9:11.57:146,0,12	0/0:22,0:22:1.23:0,1,172	1/1:18,0:17:35.90:295,36,0	0/0:30,2:30:51.65:0,52,377	0/0:19,0:19:18.27:0,18,251	0/1:12,0:10:17.91:59,0,18	0/1:22,0:21:2.59:157,0,3	1/1:8,0:7:10.09:134,10,0	1/1:1,9:9:16.68:92,17,0	1/1:17,0:15:23.12:218,23,0	0/1:18,0:18:7.68:8,0,8	0/1:19,0:18:10.80:169,0,11	1/1:21,0:17:26.19:242,26,0	1/1:21,0:20:11.80:260,12,0	1/1:4,0:5:7.62:38,8,0
chr10	29885056	.	CCAAAA	C	6347.23	PASS	AB=0.978;AC=47;AF=0.839;AN=56;BaseQRankSum=-9.806;DP=540;FS=0.465;HRun=0;HaplotypeScore=135.5995;InbreedingCoeff=0.7922;MQ=60.38;MQ0=24;MQRankSum=4.287;QD=14.66;ReadPosRankSum=0.803;VQSLOD=3.8851;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:42,0:41:90.88:715,91,0	1/1:6,0:5:9.46:105,9,0	0/0:29,0:13:22.46:0,22,349	0/1:44,0:19:27.43:27,0,188	1/1:3,15:18:34.26:211,34,0	1/1:15,0:14:38.89:334,39,0	1/1:24,0:24:14.90:113,15,0	1/1:29,0:28:56.10:477,56,0	1/1:13,0:12:32.92:271,33,0	1/1:20,0:19:38.81:320,39,0	1/1:4,5:9:11.75:77,12,0	1/1:16,1:17:38.91:358,39,0	1/1:20,0:18:44.84:393,45,0	1/1:13,0:11:32.94:287,33,0	0/0:25,0:24:51.01:0,51,633	1/1:17,0:16:38.45:357,38,0	0/0:33,0:31:76.79:0,77,1078	0/0:20,0:19:44.49:0,44,784	1/1:4,6:8:17.36:134,17,0	1/1:23,1:23:53.68:491,54,0	1/1:7,0:7:17.96:164,18,0	1/1:9,0:9:17.72:118,18,0	1/1:15,0:13:28.70:248,29,0	1/1:19,0:19:5.99:50,6,0	1/1:17,1:17:35.87:341,36,0	1/1:9,13:18:45.20:365,45,0	1/1:16,0:15:38.87:333,39,0	1/1:5,0:5:5.89:58,6,0
chr10	29885067	.	C	CA	1396.05	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=2.652;DP=518;FS=1.254;HRun=6;HaplotypeScore=123.9385;InbreedingCoeff=0.8667;MQ=69.38;MQ0=15;MQRankSum=-4.909;QD=17.67;ReadPosRankSum=0.619;VQSLOD=2.4818;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:81.08:0,81,790	0/0:5,0:4:3.45:0,3,23	0/0:28,0:16:30.39:0,30,285	0/0:40,0:21:16.69:0,17,301	0/0:17,0:17:35.99:0,36,352	0/0:16,0:15:42.08:0,42,422	0/0:19,0:19:15.03:0,15,153	0/0:32,0:32:75.61:0,76,738	0/0:13,0:12:30.05:0,30,298	0/0:19,0:18:48.09:0,48,480	0/0:6,0:6:14.98:0,15,141	0/0:16,0:16:32.98:0,33,321	0/0:18,0:17:32.93:0,33,318	0/0:14,0:14:36.06:0,36,359	1/1:12,14:25:45.61:550,46,0	0/0:15,0:15:41.95:0,42,411	1/1:15,18:32:22.11:595,22,0	1/1:8,12:19:12.86:390,13,0	0/0:9,0:7:21.03:0,21,208	0/0:24,0:24:47.64:0,48,452	0/0:9,0:9:27.06:0,27,274	0/0:10,0:10:21.04:0,21,212	0/0:17,0:16:39.05:0,39,389	0/0:19,0:19:9.02:0,9,91	0/0:17,0:16:35.79:0,36,319	0/0:18,0:17:40.53:0,41,376	0/0:16,0:15:42.06:0,42,417	0/0:4,0:4:5.92:0,6,42
chr10	29885207	.	CA	C	1462.53	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=7.873;DP=520;FS=0.000;HRun=9;HaplotypeScore=52.4193;InbreedingCoeff=0.8908;MQ=72.87;MQ0=2;MQRankSum=-1.137;QD=20.60;ReadPosRankSum=2.605;VQSLOD=4.1082;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,111,1221	0/0:6,0:6:15.04:0,15,173	0/0:20,1:14:6.21:0,6,143	0/0:11,0:9:1.69:0,2,28	0/0:21,0:21:60.17:0,60,684	0/0:17,0:17:51.10:0,51,564	0/0:20,0:20:54.15:0,54,614	0/0:32,0:32:66.15:0,66,727	0/0:9,0:9:21.05:0,21,232	0/0:14,0:14:39.10:0,39,434	0/0:20,0:20:48.14:0,48,553	0/0:18,0:18:47.99:0,48,498	0/0:12,0:12:30.09:0,30,346	0/0:16,0:16:39.10:0,39,440	1/1:2,19:21:42.07:479,42,0	0/0:13,0:13:33.02:0,33,339	1/1:1,25:26:66.03:604,66,0	1/1:2,22:24:57.03:522,57,0	0/0:18,0:18:45.10:0,45,492	0/0:23,0:23:63.15:0,63,696	0/0:15,0:15:33.10:0,33,381	0/0:11,0:11:27.06:0,27,294	0/0:16,0:16:48.14:0,48,554	0/0:26,0:26:63.12:0,63,701	0/0:13,0:13:39.12:0,39,450	0/0:20,0:20:56.35:0,56,610	0/0:24,0:24:63.19:0,63,726	0/0:13,0:13:39.08:0,39,428
chr10	29887990	.	GCA	G	14992.51	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=3.680;DP=486;FS=1.030;HRun=0;HaplotypeScore=66.7326;InbreedingCoeff=0.9946;MQ=83.43;MQ0=6;MQRankSum=-4.256;QD=37.67;ReadPosRankSum=3.436;VQSLOD=6.7259;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,25:26:66.22:972,66,0	1/1:0,8:8:24.08:353,24,0	0/0:16,0:16:45.13:0,45,768	0/0:16,0:16:45.06:0,45,708	1/1:0,19:19:54.18:795,54,0	1/1:2,9:10:18.06:256,18,0	1/1:2,18:20:36.12:530,36,0	1/1:2,28:30:84.27:1215,84,0	1/1:0,17:17:45.15:654,45,0	1/1:0,22:21:63.21:927,63,0	1/1:0,13:13:39.13:574,39,0	1/1:0,14:14:36.12:530,36,0	1/1:0,18:18:51.17:742,51,0	1/1:1,16:17:45.15:662,45,0	0/0:10,0:10:27.08:0,27,474	1/1:3,12:15:33.11:486,33,0	0/0:28,0:28:75.26:0,75,1395	0/0:18,0:18:54.18:0,54,985	1/1:1,22:23:66.20:951,66,0	1/1:1,17:18:45.15:663,45,0	1/1:3,13:16:36.12:530,36,0	1/1:0,9:9:27.09:398,27,0	1/1:0,8:8:24.08:353,24,0	1/1:0,18:18:42.14:619,42,0	1/1:0,21:20:51.17:751,51,0	1/1:1,29:29:78.26:1147,78,0	1/1:0,18:17:42.14:618,42,0	1/1:0,6:6:18.06:265,18,0
chr10	29888176	.	TAC	T	463.94	PASS	AB=0.987;AC=18;AF=0.375;AN=48;BaseQRankSum=1.693;DP=284;FS=2.987;HRun=0;HaplotypeScore=134.6885;InbreedingCoeff=-0.0555;MQ=37.09;MQ0=8;MQRankSum=-2.809;QD=2.68;ReadPosRankSum=1.303;VQSLOD=2.5083;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:16:0.22:1,0,0	0/1:2,0:2:14:14,0,15	./.	./.	0/0:17,3:19:8.38:0,8,67	0/0:9,2:11:6.27:0,6,44	1/1:3,1:3:2.94:18,3,0	0/0:11,0:9:19.37:0,19,92	0/1:6,0:6:0:0,0,0	0/1:26,0:25:99:130,0,198	0/1:11,1:10:0:0,0,0	0/0:6,3:9:2.99:0,3,25	0/0:5,5:8:3:0,3,28	0/0:7,0:7:0:0,0,0	0/0:4,0:4:5.47:0,5,30	./.	0/1:9,0:9:5.35:5,0,69	0/1:16,0:16:15.16:15,0,222	0/0:3,0:2:5.99:0,6,48	0/1:12,0:8:16:16,0,43	./.	0/1:6,0:6:0:0,0,0	1/1:5,0:5:3:25,3,0	0/1:4,0:3:0:0,0,0	0/0:15,2:16:3:0,3,29	0/1:19,0:18:84.58:85,0,191	0/1:21,2:22:25.12:205,0,25	0/1:13,0:11:24.94:67,0,25
chr10	29889432	.	C	CCTCTCT	3501.79	PASS	AB=0.870;AC=52;AF=0.963;AN=54;BaseQRankSum=-1.267;DP=633;FS=4.077;HRun=0;HaplotypeScore=151.4714;InbreedingCoeff=0.1136;MQ=66.85;MQ0=24;MQRankSum=1.974;QD=6.09;ReadPosRankSum=0.474;VQSLOD=2.6439;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:19:8.66:140,9,0	1/1:9,0:11:6.49:76,6,0	0/1:37,0:23:0:0,0,0	./.	1/1:18,0:21:12.03:143,12,0	1/1:19,0:23:8.28:112,8,0	1/1:13,0:16:11.19:90,11,0	1/1:29,0:27:5.94:41,6,0	1/1:11,0:15:11.85:107,12,0	1/1:16,0:22:23.56:349,24,0	1/1:16,0:21:9.03:129,9,0	1/1:12,0:16:5.47:96,5,0	1/1:20,0:27:14.67:240,15,0	1/1:12,0:15:12.04:201,12,0	0/1:11,3:16:3.28:90,0,3	1/1:19,0:23:17.53:209,18,0	1/1:15,0:17:7.58:160,8,0	1/1:12,8:23:6.49:194,6,0	1/1:19,0:19:4.26:51,4,0	1/1:15,0:23:8.71:112,9,0	1/1:21,0:22:12.01:145,12,0	1/1:17,0:21:5.17:99,5,0	1/1:9,0:18:12.04:175,12,0	1/1:14,0:16:3.45:25,3,0	1/1:16,0:24:3.01:33,3,0	1/1:23,0:27:20.72:227,21,0	1/1:11,0:16:17.35:256,17,0	1/1:20,0:21:0.89:2,1,0
chr10	29890642	.	A	AAAATAAATAAATAAAT	8550.52	PASS	AC=40;AF=1.000;AN=40;DP=244;FS=0.000;HRun=0;HaplotypeScore=121.8096;InbreedingCoeff=-0.1064;MQ=69.95;MQ0=0;QD=41.71;VQSLOD=3.4851;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	1/1:3,0:3:3.01:207,3,0	./.	./.	1/1:8,0:8:9.03:250,9,0	1/1:12,0:12:9.03:625,9,0	./.	1/1:29,0:26:45.09:1282,45,0	1/1:6,0:6:6.02:237,6,0	1/1:6,0:6:9.03:284,9,0	1/1:6,0:6:3.01:208,3,0	1/1:6,0:6:6.02:414,6,0	1/1:5,0:5:3.01:205,3,0	./.	1/1:7,0:11:3.01:139,3,0	1/1:11,0:11:3.01:215,3,0	1/1:24,0:24:33.11:1403,33,0	1/1:9,5:17:6.02:453,6,0	1/1:11,0:11:6.02:406,6,0	1/1:6,0:6:3.01:32,3,0	./.	./.	1/1:4,0:4:3.01:208,3,0	./.	1/1:10,0:10:6.02:265,6,0	1/1:10,0:10:9.03:450,9,0	1/1:12,0:11:12.04:600,12,0	1/1:8,0:8:18.06:664,18,0
chr10	29890674	.	T	TAAATAAATAAATAAATAAAA	10577	PASS	AB=1.000;AC=48;AF=0.857;AN=56;BaseQRankSum=-0.968;DP=225;FS=1.788;HRun=0;HaplotypeScore=94.5231;InbreedingCoeff=0.1333;MQ=65.23;MQ0=0;MQRankSum=-1.303;QD=48.74;ReadPosRankSum=0.807;VQSLOD=4.0563;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,0:7:20.88:409,21,0	1/1:2,0:2:5.98:49,6,0	0/0:4,0:4:9:0,9,99	0/0:4,0:3:2.13:0,2,38	1/1:10,0:11:26.94:373,27,0	1/1:0,6:10:9.03:863,9,0	1/1:2,0:2:5.97:48,6,0	1/1:21,0:26:75.18:1721,75,0	0/1:6,0:6:98.85:203,0,99	1/1:7,0:9:27.02:517,27,0	1/1:0,5:9:26.74:446,27,0	1/1:2,0:2:5.93:40,6,0	1/1:0,5:8:3.01:285,3,0	1/1:2,0:2:6.01:55,6,0	0/1:5,0:5:38.92:130,0,39	1/1:0,0:6:3.01:190,3,0	0/1:21,0:24:99:1510,0,158	0/1:10,0:10:71.91:160,0,72	1/1:10,0:11:29.96:517,30,0	1/1:3,0:4:12.02:292,12,0	1/1:2,0:2:6:54,6,0	1/1:2,0:2:6.01:242,6,0	1/1:1,0:1:3:27,3,0	1/1:2,0:2:6:54,6,0	1/1:2,0:19:6.02:239,6,0	1/1:8,0:9:26.97:497,27,0	1/1:8,0:8:23.97:533,24,0	1/1:13,0:16:47.94:1124,48,0
chr10	29893223	.	TTCCTTCCTTCCTTTCTTCC	T	7166.70	PASS	AB=1.000;AC=33;AF=0.635;AN=52;BaseQRankSum=-7.995;DP=468;FS=36.325;HRun=0;HaplotypeScore=107.9011;InbreedingCoeff=-0.6188;MQ=23.87;MQ0=124;MQRankSum=-3.662;QD=15.31;ReadPosRankSum=2.395;VQSLOD=1.4959;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:10:76.42:520,0,76	0/1:3,0:3:25.77:95,0,26	./.	./.	0/1:5,0:2:26.96:56,0,27	0/1:21,0:16:75.74:417,0,76	1/1:8,0:6:2.97:31,3,0	1/1:22,0:16:39.04:690,39,0	0/1:17,0:12:99:437,0,142	0/1:12,0:8:18.10:276,0,18	0/1:8,0:6:43.92:55,0,44	1/1:13,0:9:14.79:398,15,0	0/1:17,0:11:99:141,0,226	0/1:22,0:12:43.42:580,0,43	0/1:13,0:9:29.87:145,0,30	0/1:13,0:7:14.68:63,0,15	1/1:37,0:17:30.47:531,30,0	0/1:29,0:13:20.16:210,0,20	0/1:16,0:6:41.21:267,0,41	0/1:16,0:8:10.01:223,0,10	1/1:9,0:4:3.01:101,3,0	0/1:16,0:10:77.14:151,0,77	1/1:7,4:8:3.01:62,3,0	0/1:55,0:27:99:209,0,223	0/1:22,0:16:4.22:611,0,4	0/1:18,0:12:12.85:425,0,13	0/1:20,0:14:18.89:372,0,19	1/1:16,0:10:3.01:101,3,0
chr10	29893235	.	TTTCTTCC	T	2821.11	PASS	AB=0.942;AC=35;AF=0.673;AN=52;BaseQRankSum=-1.741;DP=424;FS=5.144;HRun=0;HaplotypeScore=68.6024;InbreedingCoeff=-0.4000;MQ=23.11;MQ0=119;MQRankSum=3.317;QD=6.80;ReadPosRankSum=0.541;VQSLOD=1.2547;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:31,0:13:60.60:321,0,61	1/1:2,0:2:3:27,3,0	./.	./.	1/1:3,0:2:2.96:19,3,0	1/1:14,0:10:12.02:147,12,0	1/1:3,0:5:3.84:23,4,0	0/1:14,0:9:23.34:23,0,59	0/1:15,2:12:91.47:115,0,91	0/1:9,0:5:32.44:51,0,32	0/0:9,0:7:5.38:0,5,47	0/1:9,3:9:5.11:83,0,5	0/1:14,0:8:15.68:16,0,78	0/1:18,4:13:20.62:201,0,21	0/1:11,0:8:11.13:98,0,11	1/1:9,0:7:1.51:28,2,0	1/1:31,0:13:13.15:283,13,0	0/1:23,0:10:21.63:173,0,22	0/1:16,0:4:6.95:124,0,7	1/1:15,0:8:7.39:59,7,0	1/1:10,0:4:3.01:62,3,0	0/1:15,0:9:21.67:185,0,22	1/1:8,0:5:2.60:10,3,0	0/1:52,0:27:99:241,0,144	0/1:16,4:14:0.54:207,0,1	0/1:19,0:13:32.89:294,0,33	0/1:13,6:13:6:120,0,6	1/1:11,5:10:3.01:51,3,0
chr10	29894929	.	C	CG	1054.71	PASS	AB=0.938;AC=44;AF=0.957;AN=46;BaseQRankSum=-1.568;DP=64;FS=6.690;HRun=0;HaplotypeScore=19.3276;InbreedingCoeff=-0.0878;MQ=120.03;MQ0=0;MQRankSum=-1.650;QD=16.74;ReadPosRankSum=-1.650;VQSLOD=4.2711;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,3:3:3.01:32,3,0	1/1:1,2:3:2.97:20,3,0	1/1:6,0:6:13.10:81,13,0	0/1:6,1:7:23.33:111,0,23	1/1:1,1:2:3.01:32,3,0	1/1:1,2:3:6.02:66,6,0	./.	1/1:1,0:1:3:26,3,0	1/1:0,1:1:3.01:42,3,0	./.	1/1:1,0:1:2.97:20,3,0	1/1:0,3:3:8.98:84,9,0	./.	1/1:2,2:4:9:86,9,0	1/1:0,1:1:3.01:42,3,0	1/1:1,1:2:3.01:32,3,0	1/1:0,1:1:3.01:31,3,0	./.	1/1:1,1:2:3:29,3,0	0/1:1,0:1:0:0,0,0	1/1:0,8:8:15.03:171,15,0	1/1:2,1:3:3.01:32,3,0	1/1:0,2:2:3.01:37,3,0	1/1:1,1:2:2.98:22,3,0	1/1:2,0:2:2.98:21,3,0	1/1:1,2:3:9.02:93,9,0	1/1:0,2:2:3.01:30,3,0	./.
chr10	29895523	.	T	TAA	6527.81	PASS	AB=0.840;AC=47;AF=0.839;AN=56;BaseQRankSum=-5.801;DP=483;FS=0.762;HRun=13;HaplotypeScore=73.8616;InbreedingCoeff=0.5230;MQ=76.66;MQ0=2;MQRankSum=-0.335;QD=14.77;ReadPosRankSum=-2.711;VQSLOD=3.2709;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,14:20:35.85:408,36,0	1/1:2,12:14:24.08:322,24,0	0/0:18,0:9:4.31:0,4,65	0/1:25,0:17:36.66:37,0,48	1/1:3,26:30:68.54:652,69,0	1/1:5,14:20:31.86:365,32,0	1/1:2,4:6:9.03:122,9,0	1/1:10,9:19:29.40:287,29,0	1/1:5,10:17:20.47:212,20,0	1/1:5,11:18:34.21:343,34,0	1/1:11,2:14:36.37:326,36,0	1/1:3,11:16:23.95:261,24,0	1/1:3,13:17:17.35:164,17,0	0/1:3,11:15:16.55:73,0,17	0/0:6,0:6:7.95:0,8,32	1/1:3,7:11:11.98:129,12,0	0/1:11,0:11:7.50:7,0,37	0/0:16,0:16:26.99:0,27,121	1/1:7,15:22:51.88:541,52,0	1/1:4,14:17:26.92:276,27,0	1/1:4,10:14:19.77:206,20,0	1/1:4,10:15:18:208,18,0	1/1:7,15:22:23.11:373,23,0	1/1:4,1:7:8.46:69,8,0	1/1:6,22:30:23.93:212,24,0	1/1:2,13:15:36.02:403,36,0	1/1:6,19:26:14.54:172,15,0	1/1:4,11:19:33.68:360,34,0
chr10	29895534	.	AAAG	A	688.60	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-0.984;DP=510;FS=6.285;HRun=0;HaplotypeScore=86.2885;InbreedingCoeff=0.8771;MQ=71.52;MQ0=4;MQRankSum=-1.649;QD=18.61;ReadPosRankSum=0.731;VQSLOD=3.0302;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:51.01:0,51,637	0/0:14,0:14:32.70:0,33,390	0/0:25,0:9:6.20:0,6,75	0/0:28,0:14:12.73:0,13,140	0/0:30,0:30:60.91:0,61,891	0/0:23,0:23:41.78:0,42,543	0/0:5,0:5:12.02:0,12,156	0/0:23,0:23:57.07:0,57,668	0/0:15,0:15:23.65:0,24,328	0/0:17,0:17:41.89:0,42,579	0/0:18,0:18:39.36:0,39,529	0/0:16,0:16:29.30:0,29,384	0/0:18,0:18:17.12:0,17,280	0/0:14,0:14:12.03:0,12,157	1/1:4,2:6:18.03:208,18,0	0/0:9,0:9:13.27:0,13,154	1/1:2,12:14:15.05:214,15,0	1/1:1,16:17:30.06:405,30,0	0/0:28,0:28:60.57:0,61,924	0/0:20,0:19:42.02:0,42,594	0/0:12,0:12:20.75:0,21,281	0/0:14,0:14:26.80:0,27,347	0/0:24,0:24:49.72:0,50,615	0/0:4,0:4:6.02:0,6,88	0/0:31,0:31:25.23:0,25,295	0/0:17,0:17:41.85:0,42,542	0/0:24,0:24:27.04:0,27,338	0/0:21,0:21:16.32:0,16,426
chr10	29896104	.	TGTGTGCGC	T	5380.71	PASS	AB=0.939;AC=27;AF=0.519;AN=52;BaseQRankSum=2.886;DP=498;FS=6.259;HRun=0;HaplotypeScore=124.5377;InbreedingCoeff=0.0989;MQ=57.25;MQ0=11;MQRankSum=-2.848;QD=15.87;ReadPosRankSum=2.801;VQSLOD=3.4708;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:32,1:33:56.10:134,0,56	1/1:7,2:11:12.02:229,12,0	./.	0/0:14,0:3:5.05:0,5,47	0/0:17,0:17:2.90:0,3,18	1/1:23,2:25:6.09:324,6,0	0/1:6,14:20:16.54:114,0,17	0/1:22,0:21:52.36:450,0,52	1/1:3,16:19:25.97:758,26,0	1/1:14,0:14:32.01:449,32,0	0/0:8,0:7:3.01:0,3,40	0/0:19,0:18:14.93:0,15,148	0/1:19,3:22:71.74:345,0,72	0/1:22,1:23:9.93:153,0,10	0/0:21,0:21:28.59:0,29,871	0/1:12,0:12:38.60:39,0,167	0/0:24,0:24:36.12:0,36,1083	0/0:28,0:28:41.53:0,42,1224	1/1:2,11:13:10.54:434,11,0	1/1:9,0:9:6.01:56,6,0	./.	0/1:13,1:14:7.89:160,0,8	0/1:14,0:14:13.01:13,0,104	0/1:24,0:24:99:155,0,281	1/1:13,2:15:38.48:633,38,0	0/1:18,0:18:0.41:475,0,0	1/1:21,1:22:21.04:268,21,0	0/1:9,0:9:10.62:191,0,11
chr10	29896106	.	TGTGCGC	T	7151.07	PASS	AB=0.793;AC=37;AF=0.740;AN=50;BaseQRankSum=0.319;DP=464;FS=16.734;HRun=0;HaplotypeScore=101.4498;InbreedingCoeff=0.3855;MQ=58.05;MQ0=9;MQRankSum=-2.390;QD=20.55;ReadPosRankSum=1.612;VQSLOD=3.1370;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:4,27:31:27.77:255,0,28	1/1:5,5:10:12.04:253,12,0	./.	0/0:11,0:2:2.04:0,2,6	1/1:4,13:17:2.37:8,2,0	1/1:3,19:22:27.09:595,27,0	1/1:17,1:18:11.78:201,12,0	1/1:20,0:19:43.61:567,44,0	1/1:18,0:18:26.38:479,26,0	1/1:1,12:13:35.99:611,36,0	./.	0/1:17,0:17:6.92:7,0,22	1/1:7,11:18:10.22:511,10,0	1/1:3,17:20:12.04:270,12,0	0/0:21,0:21:10.23:0,10,565	0/1:3,7:10:74.45:141,0,74	0/0:24,0:24:36.01:0,36,729	0/0:28,0:28:19.71:0,20,854	1/1:13,0:13:35.94:479,36,0	1/1:0,9:9:6.02:147,6,0	./.	1/1:3,10:13:15.05:324,15,0	0/1:13,1:14:10.48:86,0,10	0/1:23,1:24:77.77:215,0,78	1/1:12,2:14:39.13:698,39,0	1/1:2,14:16:42.09:633,42,0	1/1:1,20:21:21.06:370,21,0	1/1:9,0:9:20.94:302,21,0
chr10	29896108	.	T	TGC	460.94	PASS	AB=0.649;AC=4;AF=0.083;AN=48;BaseQRankSum=-6.019;DP=446;FS=13.091;HRun=0;HaplotypeScore=107.0600;InbreedingCoeff=0.3759;MQ=58.90;MQ0=8;MQRankSum=2.133;QD=6.40;ReadPosRankSum=1.988;VQSLOD=2.5023;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:9.80:0,10,45	0/0:9,0:9:11.36:0,11,56	./.	./.	0/0:16,0:16:2.84:0,3,14	0/0:21,0:21:22.73:0,23,112	0/0:18,0:18:8.67:0,9,50	0/0:7,0:17:30.45:0,30,192	0/0:18,0:18:22.82:0,23,108	0/0:13,0:13:32.17:0,32,193	./.	0/0:4,0:17:5.64:0,6,27	0/0:15,0:16:25.25:0,25,129	0/0:19,0:19:11.02:0,11,51	0/1:10,10:20:5.19:60,0,5	0/0:9,0:10:8.52:0,9,42	1/1:6,17:23:7.86:289,8,0	0/1:12,17:29:6.12:216,0,6	0/0:13,0:13:27.01:0,27,168	0/0:9,0:9:5.68:0,6,28	./.	0/0:12,0:12:11.36:0,11,56	0/0:4,0:14:8.55:0,9,43	0/0:19,0:24:26.46:0,26,156	0/0:14,0:14:37.90:0,38,220	0/0:14,0:14:33.51:0,34,200	0/0:21,0:21:17.04:0,17,84	0/0:9,0:9:17.73:0,18,113
chr10	29896371	.	GT	G	618.49	PASS	AB=0.856;AC=9;AF=0.161;AN=56;BaseQRankSum=4.155;DP=480;FS=3.075;HRun=14;HaplotypeScore=61.5934;InbreedingCoeff=0.1976;MQ=86.88;MQ0=4;MQRankSum=-0.547;QD=3.66;ReadPosRankSum=4.157;VQSLOD=0.1674;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:22,7:30:32.01:32,0,437	0/0:6,0:6:17.90:0,18,146	0/1:44,1:30:12.40:12,0,74	0/0:39,0:24:3.62:0,4,26	0/1:12,2:16:5.42:5,0,216	0/0:12,1:13:9.41:0,9,215	0/0:11,1:12:0.43:0,0,141	0/0:24,2:31:23.98:0,24,446	0/0:7,1:8:4.73:0,5,146	0/0:9,1:10:0.43:0,0,144	0/0:13,0:15:29.49:0,29,225	0/0:9,1:10:9.44:0,9,225	0/0:16,0:17:32.86:0,33,289	0/0:8,1:9:3.15:0,3,153	1/1:2,11:14:22.83:150,23,0	0/0:5,0:5:9:0,9,80	1/1:4,18:23:27.76:327,28,0	0/1:9,16:27:31.87:227,0,32	0/0:11,0:14:29.47:0,29,227	0/0:12,1:14:21.18:0,21,308	0/0:10,0:11:22.91:0,23,213	0/1:10,0:13:4.76:5,0,104	0/0:10,2:13:3.20:0,3,143	0/0:7,0:8:17.84:0,18,148	0/0:16,1:16:9.45:0,9,227	0/0:23,0:24:34.89:0,35,292	0/0:23,3:27:21.73:0,22,426	0/0:7,0:8:11.84:0,12,94
chr10	29897836	.	AATAT	A	11325.47	PASS	AC=46;AF=0.852;AN=54;BaseQRankSum=-5.739;DP=415;FS=2.336;HRun=0;HaplotypeScore=77.1220;InbreedingCoeff=0.7024;MQ=66.59;MQ0=0;MQRankSum=3.028;QD=29.65;ReadPosRankSum=-0.601;VQSLOD=4.3464;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,16:22:33.11:534,33,0	1/1:1,11:12:30.10:506,30,0	./.	0/0:8,0:4:0:0,0,0	1/1:2,11:14:24.05:375,24,0	1/1:6,21:28:33.96:770,34,0	1/1:6,0:6:3.01:51,3,0	1/1:12,24:36:72.28:1165,72,0	1/1:3,2:5:3.01:51,3,0	1/1:8,28:36:48.42:1298,48,0	1/1:9,14:23:36.12:608,36,0	1/1:2,11:13:15.05:253,15,0	1/1:4,8:12:21.07:354,21,0	1/1:2,7:9:15.05:253,15,0	0/0:2,0:4:6.02:0,6,105	1/1:1,9:10:14.94:253,15,0	0/0:6,0:13:21.05:0,21,346	0/0:1,0:3:6.02:0,6,105	1/1:3,15:18:44.58:634,45,0	1/1:6,13:19:33.11:533,33,0	1/1:0,5:5:12.04:203,12,0	1/1:4,3:7:9.03:134,9,0	1/1:1,5:6:9.03:152,9,0	1/1:1,4:5:6.02:101,6,0	1/1:6,22:29:45.15:737,45,0	1/1:6,21:27:63.21:1038,63,0	1/1:2,20:22:50.54:815,51,0	1/1:3,15:18:30.10:506,30,0
chr10	29898741	.	CGTGT	C	1198.41	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-1.270;DP=646;FS=2.612;HRun=0;HaplotypeScore=153.3910;InbreedingCoeff=0.6588;MQ=60.90;MQ0=15;MQRankSum=1.299;QD=16.88;ReadPosRankSum=5.211;VQSLOD=3.2753;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:36:12.50:0,12,184	0/0:9,0:9:6.49:0,6,100	0/0:28,0:20:6.02:0,6,117	0/0:28,0:20:9.03:0,9,184	0/0:20,0:20:14.99:0,15,181	0/0:17,0:17:15.05:0,15,227	0/0:24,0:23:18.05:0,18,276	0/0:28,0:28:46.92:0,47,609	0/0:22,0:22:12.01:0,12,136	0/0:27,0:25:36.46:0,36,448	0/0:18,0:18:18.06:0,18,285	0/0:32,0:32:33.06:0,33,394	0/0:17,0:17:18.51:0,19,264	0/0:15,0:18:6.47:0,6,74	1/1:7,13:23:37.79:607,38,0	0/0:8,0:18:3.01:0,3,53	1/1:16,12:30:27.08:393,27,0	1/1:10,8:18:21.07:337,21,0	0/0:15,0:15:30.07:0,30,398	0/0:26,0:25:9.03:0,9,162	0/0:32,0:29:9.02:0,9,128	0/0:26,0:24:6.02:0,6,104	0/0:11,0:19:3.01:0,3,52	0/0:14,0:19:5.91:0,6,97	0/0:24,0:23:9.01:0,9,129	0/0:27,0:33:42.56:0,43,623	0/0:25,0:22:17.68:0,18,220	0/0:7,0:7:9.03:0,9,118
chr10	29901666	.	T	TG	28380.64	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-11.949;DP=797;FS=7.552;HRun=0;HaplotypeScore=72.6531;InbreedingCoeff=0.9998;MQ=88.38;MQ0=0;MQRankSum=-7.072;QD=44.62;ReadPosRankSum=2.902;VQSLOD=5.2174;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,46:47:99:1869,117,0	1/1:1,16:17:42.14:671,42,0	0/0:25,0:25:72.23:0,72,977	0/0:31,0:31:81.94:0,82,1100	1/1:0,32:32:93.32:1487,93,0	1/1:0,23:23:66.23:1055,66,0	1/1:1,31:32:87.30:1389,87,0	1/1:0,29:29:87.30:1388,87,0	1/1:0,25:25:66.23:1055,66,0	1/1:0,27:27:81.25:1268,81,0	1/1:0,28:28:75.26:1199,75,0	1/1:0,23:23:69.24:1103,69,0	1/1:0,29:29:84.29:1343,84,0	1/1:1,34:35:90.31:1439,90,0	0/0:43,0:43:99:0,129,1799	1/1:0,26:26:78.27:1247,78,0	0/0:35,0:35:99:0,102,1423	0/0:27,0:27:81.27:0,81,1133	1/1:1,25:26:78.27:1237,78,0	1/1:0,21:21:63.21:1007,63,0	1/1:2,46:48:99:2015,126,0	1/1:0,22:22:66.23:1055,66,0	1/1:0,20:20:60.20:959,60,0	1/1:0,41:41:99:1967,123,0	1/1:0,19:18:54.18:863,54,0	1/1:1,28:29:84.29:1338,84,0	1/1:1,27:27:63.21:997,63,0	1/1:0,9:9:27.09:431,27,0
chr10	29903485	.	T	TTTTA	509.68	PASS	AC=12;AF=0.333;AN=36;BaseQRankSum=-3.191;DP=307;FS=10.391;HRun=0;HaplotypeScore=51.5730;InbreedingCoeff=0.5779;MQ=72.62;MQ0=5;MQRankSum=0.202;QD=8.09;ReadPosRankSum=-0.558;VQSLOD=0.5578;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:15:9.01:0,9,84	0/0:4,0:5:3:0,3,28	./.	./.	0/0:13,0:13:3.01:0,3,44	0/0:11,0:11:12.04:0,12,181	./.	./.	./.	0/0:11,0:11:9.03:0,9,136	./.	0/0:5,0:5:3.01:0,3,45	./.	0/0:8,0:8:6.02:0,6,91	0/0:15,0:15:15.05:0,15,227	1/1:6,2:8:6.02:139,6,0	0/0:29,0:29:33.11:0,33,494	0/0:20,0:20:17.91:0,18,217	1/1:11,2:12:6.02:139,6,0	./.	1/1:9,2:11:3.01:69,3,0	./.	0/0:7,0:7:3.01:0,3,45	./.	0/0:16,0:16:9.03:0,9,136	1/1:2,2:4:6.02:136,6,0	1/1:7,1:9:3.01:69,3,0	1/1:16,2:18:5.89:85,6,0
chr10	29904190	.	GACACAC	G	2298.79	PASS	AB=0.842;AC=33;AF=0.688;AN=48;BaseQRankSum=-1.790;DP=464;FS=0.000;HRun=0;HaplotypeScore=118.1325;InbreedingCoeff=0.3399;MQ=65.80;MQ0=11;MQRankSum=-4.119;QD=7.42;ReadPosRankSum=-0.072;VQSLOD=2.2634;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:19,6:25:5.98:81,6,0	0/0:8,0:9:0.25:0,0,1	./.	./.	1/1:11,1:15:3.01:61,3,0	1/1:13,2:18:12.93:244,13,0	1/1:22,6:29:11.91:102,12,0	./.	0/0:8,0:13:15.04:0,15,187	1/1:15,4:19:13.27:198,13,0	./.	1/1:16,1:19:15.05:247,15,0	1/1:9,7:16:18.53:345,19,0	1/1:9,1:14:6.01:69,6,0	0/0:20,0:21:30.10:0,30,915	0/1:13,8:21:17.36:280,0,17	0/0:20,0:22:21.07:0,21,505	0/0:13,0:13:15.05:0,15,331	0/1:5,4:10:26.37:123,0,26	1/1:6,5:10:2.96:20,3,0	0/1:28,0:26:0:0,0,0	1/1:9,1:11:6.02:102,6,0	1/1:7,2:9:3.48:61,3,0	1/1:17,1:19:2.93:42,3,0	1/1:6,2:8:3.01:37,3,0	1/1:19,0:19:12.34:178,12,0	0/1:8,1:9:9.30:208,0,9	0/1:6,0:5:36.76:55,0,37
chr10	29905080	.	T	TA	15198.23	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-2.341;DP=535;FS=7.488;HRun=8;HaplotypeScore=63.8706;InbreedingCoeff=0.9602;MQ=73.59;MQ0=0;MQRankSum=-6.585;QD=29.74;ReadPosRankSum=2.290;VQSLOD=4.9364;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,21:24:63.09:699,63,0	1/1:1,8:9:27.07:300,27,0	0/0:9,0:9:17.97:0,18,156	0/0:15,0:15:23.99:0,24,216	1/1:4,28:32:87.20:975,87,0	1/1:5,19:24:32.70:620,33,0	1/1:4,7:11:24.06:268,24,0	1/1:8,23:31:69.20:796,69,0	1/1:0,14:14:33.10:381,33,0	1/1:0,26:26:78.23:900,78,0	1/1:4,21:25:69.03:749,69,0	1/1:4,15:19:51.09:561,51,0	1/1:1,18:19:57.16:648,57,0	1/1:3,8:11:24.07:277,24,0	1/1:2,12:14:36.11:416,36,0	1/1:3,20:23:63.17:716,63,0	1/1:1,31:32:84.25:969,84,0	1/1:1,21:22:63.19:727,63,0	1/1:1,9:10:27.08:312,27,0	1/1:3,26:29:78.16:879,78,0	1/1:6,3:9:12.04:139,12,0	1/1:1,10:11:30.09:346,30,0	1/1:3,13:16:36.11:415,36,0	1/1:1,4:5:12.04:138,12,0	1/1:3,21:24:66.16:746,66,0	1/1:4,23:27:72.19:811,72,0	1/1:3,22:25:69.19:784,69,0	1/1:3,16:19:57.13:627,57,0
chr10	29905140	.	T	TA	11153.75	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-6.492;DP=506;FS=12.037;HRun=7;HaplotypeScore=65.7825;InbreedingCoeff=0.9154;MQ=61.37;MQ0=3;MQRankSum=-1.488;QD=28.60;ReadPosRankSum=-1.144;VQSLOD=4.3062;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,19:20:54.17:652,54,0	1/1:1,4:5:12.04:145,12,0	0/0:12,0:4:5.92:0,6,45	0/0:11,0:5:3.44:0,3,21	1/1:6,24:30:69.16:807,69,0	1/1:2,19:21:48.15:580,48,0	1/1:0,8:8:24.07:290,24,0	1/1:7,25:32:78.18:902,78,0	0/0:19,0:19:48.08:0,48,464	1/1:5,17:22:63.19:753,63,0	1/1:5,14:19:48.06:560,48,0	1/1:1,22:23:60.18:725,60,0	1/1:6,7:13:33.08:375,33,0	1/1:2,10:12:27.08:326,27,0	0/0:9,0:9:24.04:0,24,231	1/1:2,12:14:42.12:496,42,0	0/0:32,0:32:78.12:0,78,753	0/0:32,0:32:87.09:0,87,830	1/1:4,13:17:42.13:507,42,0	1/1:7,25:32:69.03:767,69,0	1/1:2,8:10:15.05:181,15,0	1/1:1,3:4:9.03:109,9,0	1/1:0,17:17:33.10:399,33,0	1/1:2,2:4:12.01:121,12,0	1/1:4,18:22:45.10:527,45,0	1/1:6,13:19:42.12:498,42,0	1/1:3,27:30:81.25:976,81,0	1/1:5,11:16:39.10:458,39,0
chr10	29905942	.	C	CT	3789.53	PASS	AB=0.689;AC=31;AF=0.554;AN=56;BaseQRankSum=-6.878;DP=564;FS=0.000;HRun=14;HaplotypeScore=77.3902;InbreedingCoeff=-0.0205;MQ=70.93;MQ0=9;MQRankSum=-1.418;QD=8.83;ReadPosRankSum=-1.892;VQSLOD=2.4281;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:13,25:39:10.18:320,10,0	0/1:2,5:7:4.40:78,0,4	0/0:21,0:14:0.78:0,1,36	0/0:19,0:12:8.32:0,8,57	1/1:8,9:19:13.20:158,13,0	0/1:5,7:12:5.39:188,0,5	1/1:12,7:19:14.74:118,15,0	0/1:18,20:38:21.41:436,0,21	0/0:5,0:13:12.15:0,12,35	0/1:11,8:18:10:148,0,10	0/1:6,2:9:11.26:53,0,11	1/1:6,12:19:21.35:201,21,0	0/1:7,8:16:16.85:90,0,17	1/1:7,8:15:26.42:199,26,0	0/0:7,0:20:0.63:0,1,24	0/1:13,11:24:9.42:193,0,9	0/0:10,0:30:34.10:0,34,120	0/0:13,0:31:34.37:0,34,130	0/1:22,4:25:55.54:173,0,56	1/1:7,12:19:6.72:164,7,0	0/1:8,8:17:18.34:131,0,18	1/1:4,10:14:29.99:264,30,0	0/1:5,5:10:18.98:90,0,19	0/1:13,19:33:27.24:245,0,27	1/1:4,5:9:12:105,12,0	0/1:10,10:20:35.33:185,0,35	0/1:13,6:19:6.40:111,0,6	1/1:10,7:17:1.09:138,1,0
chr10	29906147	.	TCTCTCTCTCTCTCTCTCC	T	3090.57	PASS	AB=1.000;AC=45;AF=0.865;AN=52;BaseQRankSum=-3.045;DP=379;FS=19.930;HRun=0;HaplotypeScore=142.7325;InbreedingCoeff=0.3700;MQ=49.70;MQ0=39;MQRankSum=1.667;QD=9.28;ReadPosRankSum=-3.776;VQSLOD=0.2498;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:19:23.88:210,24,0	1/1:7,0:7:5.98:47,6,0	./.	0/0:25,0:9:2.82:0,3,17	1/1:15,0:14:14.98:124,15,0	1/1:15,0:14:11.97:97,12,0	1/1:12,0:12:17.70:164,18,0	0/1:17,0:10:2.47:2,0,7	1/1:10,0:9:11.25:68,11,0	1/1:15,0:13:31.51:262,32,0	1/1:10,0:9:14.98:124,15,0	1/1:6,12:17:2.48:147,2,0	1/1:6,0:5:8.98:72,9,0	1/1:11,0:11:13.14:87,13,0	0/1:11,0:9:29.45:62,0,29	1/1:13,0:13:9.88:77,10,0	0/1:28,0:26:99:291,0,264	0/0:6,0:5:11.93:0,12,162	1/1:13,0:9:15:132,15,0	1/1:8,0:8:11.99:101,12,0	1/1:24,0:21:20.65:268,21,0	./.	1/1:8,0:7:11.97:97,12,0	1/1:25,1:26:38.76:290,39,0	1/1:12,0:11:14.79:113,15,0	1/1:11,0:9:8.96:97,9,0	1/1:11,0:11:26.42:197,26,0	1/1:10,0:7:14.88:95,15,0
chr10	29906926	.	C	CA	1152.12	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-6.377;DP=748;FS=0.000;HRun=0;HaplotypeScore=66.4067;InbreedingCoeff=0.9820;MQ=78.95;MQ0=0;MQRankSum=-3.376;QD=41.15;ReadPosRankSum=-0.288;VQSLOD=3.9436;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,102,1408	0/0:5,0:5:15.05:0,15,210	0/0:21,0:20:41.50:0,42,715	0/0:15,0:14:30.14:0,30,523	0/0:21,0:21:63.19:0,63,860	0/0:37,0:37:99:0,111,1534	0/0:32,0:31:96.30:0,96,1323	0/0:26,0:26:75.25:0,75,1049	1/1:0,28:28:78.27:1247,78,0	0/0:35,0:35:99:0,99,1385	0/0:26,0:26:78.26:0,78,1084	0/0:35,0:35:99:0,105,1433	0/0:19,0:19:57.19:0,57,795	0/0:28,0:28:81.26:0,81,1116	0/0:31,0:31:93.31:0,93,1300	0/0:29,1:30:42.33:0,42,1167	0/0:36,0:36:99:0,102,1425	0/0:9,0:9:27.09:0,27,378	0/0:24,0:24:69.09:0,69,963	0/0:41,0:41:99:0,117,1636	0/0:42,0:42:99:0,126,1759	0/0:24,0:24:72.24:0,72,1005	0/0:31,0:31:93.31:0,93,1300	0/0:27,0:26:81.27:0,81,1132	0/0:24,0:24:72.23:0,72,991	0/0:25,0:25:75.25:0,75,1049	0/0:32,0:32:93.29:0,93,1282	0/0:9,0:9:27.07:0,27,360
chr10	29907950	.	T	TGTGTCC	14614.47	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-0.018;DP=843;FS=0.799;HRun=0;HaplotypeScore=170.2640;InbreedingCoeff=0.8027;MQ=67.24;MQ0=11;MQRankSum=-1.488;QD=18.88;ReadPosRankSum=4.155;VQSLOD=4.5728;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:43,0:41:62.02:804,62,0	1/1:16,0:16:29.78:425,30,0	0/0:34,0:31:33.04:0,33,340	0/0:35,0:30:20.09:0,20,225	1/1:30,0:29:45.02:538,45,0	1/1:26,0:23:11.65:88,12,0	1/1:38,0:36:80.70:1242,81,0	1/1:30,0:26:32.92:319,33,0	1/1:20,0:20:29.39:199,29,0	1/1:34,0:32:61.91:857,62,0	1/1:10,0:10:17.72:199,18,0	1/1:13,35:49:2.71:30,3,0	1/1:27,0:27:47.84:626,48,0	1/1:35,0:35:57:970,57,0	1/1:52,0:50:62.79:873,63,0	1/1:29,0:29:47.99:699,48,0	1/1:32,0:32:37.64:871,38,0	1/1:33,0:32:48.06:847,48,0	1/1:24,0:22:23.80:218,24,0	1/1:19,0:19:20.98:245,21,0	1/1:59,0:58:77.34:1262,77,0	1/1:24,0:24:51.01:618,51,0	1/1:16,0:15:6.01:181,6,0	1/1:10,32:45:5.98:78,6,0	1/1:22,0:21:19.91:407,20,0	1/1:32,0:32:38.54:784,39,0	1/1:21,0:21:47.92:907,48,0	1/1:8,0:8:20.99:326,21,0
chr10	29907956	.	C	CGTGTCC	14583.27	PASS	AB=1.000;AC=51;AF=0.911;AN=56;BaseQRankSum=-0.823;DP=859;FS=1.624;HRun=0;HaplotypeScore=178.7066;InbreedingCoeff=0.6210;MQ=59.61;MQ0=15;MQRankSum=-0.448;QD=18.23;ReadPosRankSum=4.846;VQSLOD=4.4246;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:45,0:43:62.02:804,62,0	1/1:15,0:15:29.78:425,30,0	0/0:30,0:27:33.04:0,33,340	0/0:29,0:21:20.09:0,20,225	1/1:31,0:29:45.02:538,45,0	1/1:13,13:25:11.65:88,12,0	1/1:42,0:39:77.88:1206,78,0	1/1:32,0:28:32.92:319,33,0	1/1:17,0:16:29.39:199,29,0	1/1:36,0:34:61.91:857,62,0	1/1:9,0:9:17.72:199,18,0	1/1:48,0:48:2.62:30,3,0	1/1:28,0:28:47.84:626,48,0	1/1:39,0:38:57.47:971,57,0	1/1:51,0:48:62.79:873,63,0	1/1:29,0:29:47.99:699,48,0	1/1:35,0:36:15.38:903,15,0	1/1:39,0:37:50.03:883,50,0	1/1:20,0:16:23.80:218,24,0	1/1:21,0:20:20.87:245,21,0	1/1:64,0:62:77.33:1262,77,0	1/1:27,0:27:51.01:618,51,0	1/1:15,0:14:6.01:181,6,0	1/1:45,0:45:3.01:58,3,0	1/1:23,0:22:19.91:407,20,0	0/1:33,0:33:24:739,0,24	1/1:20,0:20:47.92:907,48,0	1/1:7,0:7:20.99:326,21,0
chr10	29907980	.	TGTGTCTGTGTCCGTGTCC	T	629.14	PASS	AB=0.962;AC=15;AF=0.268;AN=56;BaseQRankSum=-2.612;DP=938;FS=9.152;HRun=0;HaplotypeScore=352.6962;InbreedingCoeff=-0.4112;MQ=45.83;MQ0=40;MQRankSum=3.421;QD=1.39;ReadPosRankSum=-6.807;VQSLOD=0.1651;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:44:12.13:0,12,839	0/0:13,0:13:3.10:0,3,592	0/0:27,0:13:18.01:0,18,318	0/0:31,0:12:11.21:0,11,336	0/1:24,4:25:26.15:26,0,662	0/0:31,0:28:1.46:0,1,241	0/1:44,0:37:12.75:13,0,858	0/1:35,0:24:8.72:9,0,1246	0/1:20,0:18:52.92:53,0,230	0/1:37,0:34:18.35:18,0,1214	0/1:12,0:12:17.98:18,0,218	0/0:55,0:54:27.58:0,28,778	0/1:30,0:30:77.22:77,0,854	0/1:38,0:37:30.89:31,0,1083	0/0:50,0:42:8.22:0,8,383	0/0:34,0:34:44.02:0,44,1135	0/0:35,0:34:1.90:0,2,904	0/1:41,0:36:86.71:87,0,682	0/0:23,0:14:30.09:0,30,735	0/0:15,7:21:23.40:0,23,602	0/0:88,0:81:20.63:0,21,1556	0/0:28,0:28:4.96:0,5,1008	0/1:16,3:17:9.94:10,0,231	0/1:57,0:54:63.37:63,0,696	0/1:19,0:18:58.53:59,0,69	0/1:24,19:41:99:272,0,966	0/1:21,0:20:12.17:12,0,691	0/1:7,0:7:30.95:31,0,182
chr10	29908017	.	GTGACTA	G	2149.25	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=-1.233;DP=789;FS=2.453;HRun=0;HaplotypeScore=186.3593;InbreedingCoeff=-0.0826;MQ=51.86;MQ0=38;MQRankSum=-2.218;QD=3.82;ReadPosRankSum=-3.950;VQSLOD=1.9889;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:35,0:31:17.44:17,0,51	0/1:12,0:12:46.20:46,0,115	0/1:36,0:14:3.25:3,0,323	0/0:52,0:21:22.64:0,23,379	0/0:10,0:8:0.47:0,0,1	0/0:20,0:17:12.23:0,12,97	0/1:42,0:32:10.08:59,0,10	1/1:15,0:10:16.84:127,17,0	0/1:16,0:15:3.84:4,0,43	0/1:17,0:12:2.33:2,0,62	0/0:6,9:12:8.96:0,9,71	0/0:40,0:39:29.28:0,29,236	0/1:26,0:26:18.09:18,0,127	0/1:43,0:42:43.14:43,0,286	1/1:11,37:41:5.85:71,6,0	0/1:35,0:34:70.92:71,0,166	1/1:34,0:32:53.90:863,54,0	1/1:39,0:33:43.23:766,43,0	0/1:12,0:11:37.53:38,0,97	0/0:14,0:14:11.13:0,11,55	0/1:72,0:61:4.79:5,0,129	0/1:24,0:22:12.58:13,0,52	0/0:10,0:10:2.94:0,3,18	0/0:51,0:48:19.13:0,19,174	0/1:11,0:9:12.34:12,0,18	0/1:27,0:25:54.82:122,0,55	0/1:19,0:17:35.33:35,0,165	0/0:13,0:13:21.72:0,22,157
chr10	29909702	.	G	GCA	1290.41	PASS	AB=0.694;AC=30;AF=0.714;AN=42;BaseQRankSum=-1.696;DP=271;FS=3.938;HRun=0;HaplotypeScore=62.3747;InbreedingCoeff=0.3651;MQ=51.30;MQ0=4;MQRankSum=-1.043;QD=6.48;ReadPosRankSum=0.009;VQSLOD=2.4935;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:15,1:16:5.92:56,6,0	0/0:2,3:5:0:0,0,0	0/0:4,0:3:2.96:0,3,19	0/0:7,0:4:5.92:0,6,40	0/1:1,5:6:0:0,0,0	1/1:1,11:11:3.01:48,3,0	0/1:1,17:18:0:0,0,0	1/1:9,0:9:11.89:90,12,0	./.	1/1:3,8:11:20.18:250,20,0	./.	1/1:8,3:11:8.99:116,9,0	./.	0/0:9,0:9:0:0,0,0	./.	./.	1/1:17,0:17:1.98:33,2,0	0/1:13,0:13:7.90:8,0,39	1/1:13,0:12:23.64:182,24,0	1/1:7,0:7:3.01:48,3,0	1/1:12,1:13:6.02:94,6,0	./.	./.	0/1:3,2:5:0.06:0,0,0	1/1:3,14:16:3.01:54,3,0	1/1:1,12:13:15.01:205,15,0	1/1:8,0:8:2.77:19,3,0	1/1:10,0:10:20.80:189,21,0
chr10	29909707	.	CGT	C	1580.92	PASS	AB=1.000;AC=42;AF=0.840;AN=50;BaseQRankSum=-4.690;DP=284;FS=7.018;HRun=0;HaplotypeScore=60.4500;InbreedingCoeff=0.2623;MQ=54.92;MQ0=3;MQRankSum=-1.501;QD=6.53;ReadPosRankSum=-2.185;VQSLOD=1.0896;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:19:6.76:85,7,0	1/1:7,0:7:5.68:49,6,0	0/0:5,0:4:7.23:0,7,50	0/1:7,0:4:5.95:6,0,39	1/1:6,0:6:3.37:16,3,0	0/0:10,0:10:0.89:0,1,2	1/1:20,0:20:8.99:75,9,0	1/1:7,0:7:13.97:82,14,0	./.	0/1:11,0:11:11.23:63,0,11	./.	1/1:14,0:14:9.35:62,9,0	1/1:10,0:10:3:25,3,0	1/1:10,0:10:8.99:75,9,0	./.	1/1:8,0:8:5.99:49,6,0	1/1:16,1:17:22.62:192,23,0	1/1:13,0:13:32.91:330,33,0	1/1:14,0:13:32.66:229,33,0	1/1:8,0:8:2.32:24,2,0	1/1:15,0:15:8.13:55,8,0	1/1:7,0:7:3:25,3,0	1/1:9,0:9:5.99:50,6,0	1/1:5,0:5:6.46:49,6,0	1/1:17,0:16:6.88:52,7,0	0/0:11,0:11:2.31:0,2,8	1/1:8,0:8:2.88:18,3,0	1/1:10,0:10:14.18:87,14,0
chr10	29909710	.	G	GCA	2863.28	PASS	AB=1.000;AC=47;AF=0.904;AN=52;BaseQRankSum=-3.686;DP=313;FS=0.000;HRun=0;HaplotypeScore=74.8344;InbreedingCoeff=0.4442;MQ=61.62;MQ0=3;MQRankSum=-1.212;QD=10.19;ReadPosRankSum=-1.504;VQSLOD=2.8674;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:19:15:146,15,0	1/1:7,0:7:8.94:78,9,0	0/0:7,0:6:5.08:0,5,61	0/0:9,0:6:5.75:0,6,66	1/1:6,0:6:2.80:13,3,0	1/1:11,0:11:3.01:53,3,0	1/1:21,0:21:11.98:99,12,0	1/1:8,0:8:11.95:124,12,0	0/1:9,0:9:0.05:0,0,3	1/1:13,0:13:32.98:410,33,0	./.	1/1:16,0:16:23.86:263,24,0	1/1:9,0:9:3:26,3,0	1/1:10,0:10:8.99:75,9,0	./.	1/1:8,0:8:6.01:75,6,0	1/1:17,0:17:19.95:146,20,0	1/1:15,0:15:25.12:170,25,0	1/1:15,0:14:35.04:292,35,0	1/1:10,0:10:9.01:105,9,0	1/1:20,0:20:15.03:201,15,0	1/1:7,0:7:3:25,3,0	1/1:10,0:10:8.99:75,9,0	1/1:4,0:4:5.99:49,6,0	1/1:18,0:17:11.37:113,11,0	1/1:11,0:11:12.04:193,12,0	1/1:7,0:7:5.29:33,5,0	1/1:10,0:10:21.37:212,21,0
chr10	29911271	.	GA	G	17952.87	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-3.335;DP=606;FS=4.364;HRun=4;HaplotypeScore=70.7595;InbreedingCoeff=0.9969;MQ=83.20;MQ0=0;MQRankSum=-9.629;QD=31.72;ReadPosRankSum=5.545;VQSLOD=5.2285;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,21:25:72.20:846,72,0	1/1:0,10:10:30.09:355,30,0	0/0:24,0:24:63.21:0,63,858	0/0:16,0:15:35.12:0,35,436	1/1:0,16:16:42.13:502,42,0	1/1:1,22:23:60.18:719,60,0	1/1:1,16:17:36.11:432,36,0	1/1:2,31:33:93.22:1075,93,0	1/1:1,23:24:66.20:792,66,0	1/1:0,23:23:66.20:792,66,0	1/1:0,7:7:21.06:252,21,0	1/1:0,28:28:72.22:860,72,0	1/1:1,23:24:66.20:788,66,0	1/1:0,27:27:69.21:828,69,0	1/1:1,27:28:81.25:972,81,0	1/1:0,19:19:48.15:576,48,0	1/1:1,16:17:42.13:504,42,0	1/1:0,9:9:27.08:324,27,0	1/1:1,19:20:57.17:682,57,0	1/1:2,27:29:72.22:864,72,0	1/1:1,23:24:48.15:576,48,0	1/1:1,18:19:48.15:576,48,0	1/1:1,25:25:63.19:755,63,0	1/1:1,25:26:72.22:864,72,0	1/1:0,27:27:72.22:863,72,0	1/1:1,23:24:69.21:828,69,0	1/1:1,27:28:75.23:899,75,0	1/1:0,13:13:36.11:432,36,0
chr10	29911314	.	CCTCTT	C	466.21	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.209;DP=617;FS=3.972;HRun=0;HaplotypeScore=183.8859;InbreedingCoeff=0.9553;MQ=67.96;MQ0=0;MQRankSum=-2.907;QD=38.85;ReadPosRankSum=-1.994;VQSLOD=3.3857;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:90.14:0,90,2641	0/0:7,0:7:18.06:0,18,559	0/0:39,0:30:81.74:0,82,2095	0/0:39,0:28:13.91:0,14,1358	1/1:2,10:12:27.09:560,27,0	0/0:33,0:33:93.32:0,93,2794	0/0:18,0:18:51.17:0,51,1413	0/0:15,0:15:45.15:0,45,1111	0/0:30,0:30:84.28:0,84,2438	0/0:27,0:27:78.26:0,78,2304	0/0:9,0:9:27.09:0,27,841	0/0:27,0:27:72.25:0,72,2200	0/0:19,0:19:51.17:0,51,1571	0/0:19,0:19:48.16:0,48,1310	0/0:26,0:26:75.26:0,75,2204	0/0:19,0:19:54.19:0,54,1627	0/0:21,0:21:60.21:0,60,1839	0/0:5,0:5:15.05:0,15,469	0/0:18,0:18:45.15:0,45,1217	0/0:23,0:23:69.24:0,69,2026	0/0:26,0:26:60.21:0,60,1809	0/0:16,0:16:42.14:0,42,1259	0/0:24,0:24:63.22:0,63,1950	0/0:28,0:28:78.27:0,78,2339	0/0:24,0:24:60.20:0,60,1721	0/0:22,0:22:66.23:0,66,1920	0/0:27,0:25:78.17:0,78,2206	0/0:12,0:12:30.10:0,30,828
chr10	29911505	.	C	CCA	29975.94	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=6.326;DP=713;FS=0.000;HRun=0;HaplotypeScore=176.3022;InbreedingCoeff=0.9990;MQ=81.54;MQ0=0;MQRankSum=-9.783;QD=44.81;ReadPosRankSum=5.946;VQSLOD=4.8543;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,32:46:99:1833,114,0	1/1:1,10:11:30.10:540,30,0	0/0:24,0:23:60.17:0,60,777	0/0:20,0:20:29.84:0,30,555	1/1:6,18:24:54.16:913,54,0	1/1:2,17:19:51.17:918,51,0	1/1:3,24:27:63.22:1133,63,0	1/1:3,23:26:66.16:1084,66,0	1/1:0,24:24:63.22:1130,63,0	1/1:1,18:19:54.19:972,54,0	1/1:1,22:25:59.85:1076,60,0	1/1:4,36:41:99:1889,108,0	1/1:2,24:26:72.23:1225,72,0	1/1:2,18:20:60.19:1047,60,0	1/1:1,33:34:93.25:1628,93,0	1/1:3,19:22:63.20:1102,63,0	1/1:4,27:31:90.28:1585,90,0	1/1:1,21:22:54.17:942,54,0	1/1:3,20:24:63.17:1031,63,0	1/1:1,27:28:65.24:1235,65,0	1/1:3,26:29:63.22:1133,63,0	1/1:1,20:21:51.17:917,51,0	1/1:4,11:15:33.10:559,33,0	1/1:3,37:40:99:1780,99,0	1/1:1,17:18:48.16:863,48,0	1/1:9,22:31:72.19:1234,72,0	1/1:3,32:34:96.33:1718,96,0	1/1:2,8:10:30.07:490,30,0
chr10	29911584	.	GT	G	8688.08	PASS	AB=0.664;AC=44;AF=0.786;AN=56;BaseQRankSum=2.865;DP=678;FS=17.523;HRun=12;HaplotypeScore=199.6978;InbreedingCoeff=0.1255;MQ=68.06;MQ0=1;MQRankSum=-7.579;QD=13.75;ReadPosRankSum=4.379;VQSLOD=3.0943;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:14,35:50:56.42:745,56,0	1/1:4,12:16:38.85:301,39,0	0/0:26,1:25:16.54:0,17,292	0/0:16,0:15:11.26:0,11,127	1/1:8,25:33:3.82:383,4,0	1/1:4,13:18:43.86:331,44,0	1/1:8,21:30:34.75:456,35,0	0/1:16,7:24:10.60:194,0,11	1/1:5,15:20:47.77:368,48,0	0/1:12,16:28:4.15:336,0,4	1/1:3,12:15:35.85:279,36,0	1/1:10,16:28:57.79:427,58,0	1/1:10,15:27:2.78:326,3,0	1/1:4,16:21:49.83:377,50,0	1/1:8,18:26:12.84:427,13,0	1/1:7,14:21:20.32:338,20,0	1/1:7,10:18:31.85:238,32,0	0/1:5,4:9:32.53:95,0,33	0/1:14,12:28:3.61:279,0,4	1/1:14,27:40:7.76:509,8,0	0/1:8,11:19:25.09:194,0,25	0/1:4,12:17:14.03:260,0,14	1/1:5,20:25:11.65:373,12,0	0/1:17,22:39:35.08:452,0,35	1/1:7,16:23:29.28:406,29,0	0/1:15,9:25:23.28:197,0,23	1/1:7,12:21:36.85:260,37,0	1/1:2,5:7:17.89:136,18,0
chr10	29911620	.	C	CT	25972.93	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-1.996;DP=665;FS=18.480;HRun=1;HaplotypeScore=114.4888;InbreedingCoeff=0.9705;MQ=77.04;MQ0=0;MQRankSum=-11.118;QD=42.30;ReadPosRankSum=3.876;VQSLOD=2.7983;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,44:46:99:1629,102,0	1/1:0,11:11:33.11:527,33,0	0/0:24,0:24:69.15:0,69,916	0/0:27,0:27:70.56:0,71,894	1/1:1,32:32:78.27:1245,78,0	1/1:3,25:28:72.23:1121,72,0	1/1:1,18:19:54.18:859,54,0	1/1:1,25:26:78.27:1247,78,0	1/1:0,18:18:54.18:860,54,0	1/1:1,32:33:96.33:1530,96,0	1/1:2,14:16:33.10:504,33,0	1/1:2,25:27:75.26:1193,75,0	1/1:0,23:23:66.23:1051,66,0	1/1:1,16:17:45.15:718,45,0	1/1:4,27:31:84.27:1314,84,0	1/1:1,25:26:75.26:1195,75,0	1/1:2,19:20:63.18:958,63,0	1/1:2,12:14:36.11:551,36,0	1/1:2,19:21:60.20:957,60,0	1/1:1,31:31:87.30:1386,87,0	1/1:2,20:22:54.17:838,54,0	1/1:4,14:18:45.15:718,45,0	1/1:0,22:21:63.21:1005,63,0	1/1:2,31:33:78.24:1198,78,0	1/1:4,18:22:60.20:950,60,0	1/1:1,25:26:75.23:1173,75,0	1/1:3,23:26:72.21:1102,72,0	1/1:0,3:3:9.03:143,9,0
chr10	29917752	.	TTCTCTCTCTCTC	T	2699.50	PASS	AB=0.880;AC=26;AF=0.650;AN=40;BaseQRankSum=2.069;DP=461;FS=14.154;HRun=0;HaplotypeScore=163.0227;InbreedingCoeff=0.3189;MQ=58.05;MQ0=18;MQRankSum=-2.282;QD=11.49;ReadPosRankSum=1.092;VQSLOD=2.1098;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:27:0:0,0,0	1/1:7,5:12:6.02:192,6,0	./.	./.	./.	1/1:9,0:12:1.25:3,1,0	0/0:12,5:17:0.47:0,0,1	0/0:40,0:38:1.55:0,2,4	0/0:12,0:12:15.05:0,15,578	1/1:12,3:18:21.07:649,21,0	1/1:17,0:20:5.38:88,5,0	1/1:8,0:8:3:25,3,0	1/1:9,1:12:3.48:83,3,0	0/1:8,0:9:0.13:64,0,0	0/0:10,0:10:3:0,3,29	1/1:6,3:8:4.57:104,5,0	0/0:14,0:19:6:0,6,74	0/1:19,0:21:85.57:86,0,86	1/1:16,2:16:6.02:202,6,0	./.	./.	./.	./.	0/1:18,0:16:12.95:100,0,13	./.	1/1:8,0:17:27.09:855,27,0	1/1:8,1:16:12.04:261,12,0	1/1:11,0:10:5.97:108,6,0
chr10	29918538	.	A	ACCGC	2261.81	PASS	AB=1.000;AC=42;AF=0.750;AN=56;BaseQRankSum=-0.109;DP=268;FS=2.490;HRun=0;HaplotypeScore=67.0032;InbreedingCoeff=0.6145;MQ=71.36;MQ0=2;MQRankSum=-1.948;QD=11.54;ReadPosRankSum=0.000;VQSLOD=2.8751;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:14:18.10:133,18,0	1/1:3,0:3:9.02:159,9,0	0/0:10,0:9:13.14:0,13,150	0/1:21,0:16:16.06:16,0,322	1/1:3,0:3:3.01:67,3,0	1/1:13,0:13:23.86:198,24,0	1/1:16,0:16:11.06:177,11,0	1/1:3,5:9:14.28:89,14,0	0/0:8,0:10:29.99:0,30,278	1/1:2,0:2:2.97:21,3,0	1/1:7,0:8:8.96:105,9,0	1/1:11,0:11:6.01:128,6,0	1/1:9,0:9:17.52:213,18,0	1/1:9,0:9:18.55:220,19,0	0/0:6,0:7:15:0,15,131	0/1:2,0:2:0:0,0,0	0/0:23,0:24:57.46:0,57,615	0/0:12,0:13:36.01:0,36,385	1/1:9,0:9:20.50:162,20,0	1/1:6,0:6:11.94:99,12,0	1/1:9,0:9:3.01:71,3,0	1/1:5,0:5:11.65:101,12,0	0/0:1,4:6:0.47:0,0,1	1/1:12,0:12:3.48:68,3,0	1/1:8,0:8:8.80:99,9,0	1/1:7,0:7:11.77:157,12,0	1/1:17,0:16:3.48:48,3,0	1/1:3,0:3:8.89:100,9,0
chr10	29918540	.	C	CG	1030.27	PASS	AB=0.815;AC=36;AF=0.667;AN=54;BaseQRankSum=-0.486;DP=273;FS=4.373;HRun=0;HaplotypeScore=65.8157;InbreedingCoeff=0.4993;MQ=71.30;MQ0=2;MQRankSum=-1.640;QD=5.96;ReadPosRankSum=-0.652;VQSLOD=2.8742;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:15:15.67:129,16,0	1/1:3,0:3:0.47:36,0,0	0/0:12,0:9:15.96:0,16,182	0/0:23,0:18:28.95:0,29,320	1/1:2,0:2:2.94:18,3,0	1/1:14,0:14:11.45:154,11,0	1/1:10,9:19:8.48:72,8,0	1/1:8,0:8:14.18:70,14,0	0/0:11,0:11:29.93:0,30,249	1/1:2,0:2:2.97:21,3,0	1/1:9,0:9:8.85:63,9,0	0/1:4,5:9:4.65:14,0,5	1/1:9,0:10:14.48:87,14,0	1/1:8,0:8:3.20:91,3,0	0/0:6,0:6:15:0,15,131	0/0:4,0:4:3:0,3,26	0/0:26,0:26:56.96:0,57,538	0/0:12,0:12:35.96:0,36,318	1/1:7,0:7:3.49:84,3,0	0/1:6,0:6:1:54,0,1	0/1:3,5:8:13.25:13,0,19	1/1:6,0:6:10.64:55,11,0	./.	1/1:3,9:12:2.68:21,3,0	1/1:8,1:9:8.79:63,9,0	1/1:2,4:6:11.72:104,12,0	1/1:2,15:16:2.73:23,3,0	0/1:3,0:3:0.20:31,0,0
chr10	29918911	.	GA	G	8415.01	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=8.170;DP=460;FS=10.470;HRun=9;HaplotypeScore=72.5504;InbreedingCoeff=0.9708;MQ=70.67;MQ0=0;MQRankSum=0.500;QD=23.25;ReadPosRankSum=-0.490;VQSLOD=5.0001;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,35:38:96.05:879,96,0	1/1:0,8:8:21:192,21,0	0/0:10,0:9:18.05:0,18,197	0/0:4,0:4:8.99:0,9,86	1/1:0,17:17:51.03:467,51,0	1/1:2,15:17:45.02:412,45,0	1/1:1,10:11:30.02:275,30,0	1/1:3,21:24:31.41:542,31,0	0/0:3,0:17:42.91:0,43,228	1/1:2,15:17:45.02:412,45,0	1/1:1,15:16:42.02:384,42,0	1/1:0,27:27:81.04:741,81,0	1/1:2,17:19:42.02:384,42,0	1/1:1,11:12:30.02:275,30,0	0/0:17,0:17:51.15:0,51,589	1/1:0,6:6:18.01:165,18,0	0/0:27,0:27:75.20:0,75,846	0/0:23,0:23:35.72:0,36,665	1/1:4,17:21:51:460,51,0	1/1:0,14:14:36.01:329,36,0	1/1:5,12:17:30.01:275,30,0	1/1:0,9:9:21.01:192,21,0	1/1:0,13:13:36.02:329,36,0	1/1:3,12:15:36.02:329,36,0	1/1:2,17:19:42.02:384,42,0	1/1:2,22:24:66.03:604,66,0	1/1:2,11:13:33.02:302,33,0	1/1:0,5:5:9:82,9,0
chr10	29919320	.	GTGAATGACATACGGCAT	G	2562.22	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.125;DP=718;FS=8.180;HRun=0;HaplotypeScore=314.5523;InbreedingCoeff=0.9992;MQ=81.53;MQ0=0;MQRankSum=-7.062;QD=122.01;ReadPosRankSum=3.179;VQSLOD=2.4692;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,105,7747	0/0:15,0:15:42.13:0,42,3161	0/0:19,0:19:51.14:0,51,2862	0/0:19,0:19:51.15:0,51,2827	0/0:28,0:28:78.22:0,78,5476	0/0:17,0:17:51.16:0,51,3437	0/0:28,0:27:81.25:0,81,5857	0/0:39,0:39:99:0,105,6413	1/1:0,21:21:54.19:2657,54,0	0/0:29,0:29:84.29:0,84,6629	0/0:23,0:23:60.16:0,60,3929	0/0:33,0:33:96.32:0,96,6989	0/0:24,0:24:72.25:0,72,5536	0/0:40,0:40:99:0,120,8987	0/0:39,0:39:99:0,108,6519	0/0:23,0:23:69.24:0,69,5341	0/0:34,0:34:99:0,102,8075	0/0:11,0:11:33.11:0,33,2247	0/0:24,0:24:69.22:0,69,4871	0/0:26,0:26:78.26:0,78,5824	0/0:29,0:29:84.29:0,84,6097	0/0:28,0:28:81.28:0,81,6460	0/0:21,0:21:63.22:0,63,5186	0/0:29,0:29:87.30:0,87,6699	0/0:19,0:19:54.17:0,54,3778	0/0:23,0:23:69.24:0,69,5672	0/0:26,0:26:78.23:0,78,5800	0/0:12,0:12:30.10:0,30,2497
chr10	29920171	.	C	CTCTTTCTTTCTT	10461.45	PASS	AB=0.649;AC=46;AF=0.885;AN=52;BaseQRankSum=-4.693;DP=610;FS=4.014;HRun=0;HaplotypeScore=177.8116;InbreedingCoeff=0.4127;MQ=60.63;MQ0=5;MQRankSum=-3.974;QD=19.30;ReadPosRankSum=-2.986;VQSLOD=3.6424;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:26:3.11:0,3,7	1/1:2,0:9:17.09:385,17,0	./.	./.	1/1:28,0:28:41.90:729,42,0	1/1:11,0:23:18.06:445,18,0	1/1:13,0:15:15.03:225,15,0	1/1:36,0:35:26.98:329,27,0	0/0:11,0:13:14.38:0,14,378	0/1:10,0:24:98.41:98,0,114	0/1:12,0:24:37.06:110,0,37	1/1:10,0:20:27.09:628,27,0	1/1:9,12:24:9.03:511,9,0	1/1:11,0:20:27.09:633,27,0	1/1:11,0:19:9.03:207,9,0	1/1:10,0:18:16.10:442,16,0	1/1:19,0:28:12.04:276,12,0	1/1:16,0:23:9.03:190,9,0	1/1:13,0:19:21.06:475,21,0	1/1:14,10:27:20.99:542,21,0	1/1:14,0:14:26.93:295,27,0	1/1:6,0:15:24.08:514,24,0	1/1:13,0:22:24.97:574,25,0	1/1:9,9:21:6.02:278,6,0	1/1:10,16:32:14.08:701,14,0	1/1:20,0:38:49.65:930,50,0	1/1:9,13:24:8.63:423,9,0	1/1:11,7:18:9.03:520,9,0
chr10	29921988	.	A	AACACACAC	5922.90	PASS	AC=46;AF=0.920;AN=50;BaseQRankSum=-1.190;DP=348;FS=0.000;HRun=0;HaplotypeScore=107.9051;InbreedingCoeff=0.2883;MQ=58.80;MQ0=5;MQRankSum=-2.355;QD=21.46;ReadPosRankSum=-0.582;VQSLOD=4.1833;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:14,3:16:9.03:274,9,0	1/1:5,0:4:3.01:43,3,0	./.	./.	1/1:10,4:16:12.04:330,12,0	1/1:12,0:12:9.03:208,9,0	1/1:11,2:13:14.51:346,15,0	1/1:28,0:27:27.02:387,27,0	0/0:11,0:17:8.68:0,9,47	1/1:13,0:16:21.04:372,21,0	1/1:10,0:12:12.02:153,12,0	1/1:5,3:8:3.01:114,3,0	1/1:7,4:10:9.03:300,9,0	1/1:4,5:9:3.01:104,3,0	1/1:10,1:19:5.99:187,6,0	1/1:8,1:8:9.03:325,9,0	1/1:7,0:16:3.01:77,3,0	1/1:9,0:9:6.02:138,6,0	1/1:5,1:5:3.01:123,3,0	1/1:7,4:11:12.04:389,12,0	./.	1/1:4,1:5:6.02:147,6,0	1/1:7,0:8:3.01:41,3,0	0/0:10,0:9:0:0,0,0	1/1:7,4:11:18.06:621,18,0	1/1:11,1:12:15.04:427,15,0	1/1:12,3:15:21.07:715,21,0	1/1:2,0:2:5.99:102,6,0
chr10	29922028	.	A	AAT	5742.66	PASS	AB=0.615;AC=37;AF=0.661;AN=56;BaseQRankSum=-3.919;DP=393;FS=35.016;HRun=0;HaplotypeScore=91.3804;InbreedingCoeff=0.2727;MQ=55.29;MQ0=8;MQRankSum=1.242;QD=19.27;ReadPosRankSum=-1.548;VQSLOD=2.7404;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,15:19:15.05:243,15,0	1/1:1,4:4:6.02:98,6,0	0/0:8,0:1:3.01:0,3,32	0/0:12,1:7:3.51:0,4,62	0/1:11,7:18:29.36:224,0,29	0/1:6,10:16:28.20:90,0,28	1/1:4,10:18:17.79:267,18,0	1/1:6,24:30:69.06:1029,69,0	0/0:21,0:20:41.45:0,41,462	1/1:4,19:23:50.08:727,50,0	1/1:4,7:13:9.03:135,9,0	0/1:2,9:11:19.14:228,0,19	0/1:7,9:15:17.39:222,0,17	1/1:2,8:10:9.03:148,9,0	0/0:17,0:17:30.08:0,30,351	0/1:2,4:8:25.50:86,0,25	0/0:21,0:21:45.09:0,45,532	0/0:15,0:14:30.08:0,30,358	0/1:6,9:14:22.65:443,0,23	1/1:6,8:13:21.07:333,21,0	1/1:1,8:9:9.03:146,9,0	1/1:3,3:5:3.01:49,3,0	1/1:1,7:8:9.03:123,9,0	1/1:2,4:7:2.60:48,3,0	0/1:4,9:13:5.80:170,0,6	1/1:3,12:16:2.04:499,2,0	1/1:3,7:10:14.48:201,14,0	1/1:2,7:11:7:235,7,0
chr10	29924556	.	G	GTA	109.73	PASS	AB=0.930;AC=7;AF=0.184;AN=38;BaseQRankSum=0.551;DP=218;FS=13.290;HRun=0;HaplotypeScore=35.1709;InbreedingCoeff=0.0169;MQ=78.06;MQ0=2;MQRankSum=-0.275;QD=1.28;ReadPosRankSum=0.155;VQSLOD=-0.0936;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:5:3.01:0,3,31	./.	./.	0/0:25,0:12:0.72:0,1,2	0/0:4,0:5:3.01:0,3,35	0/0:5,0:5:6.02:0,6,66	./.	0/1:36,1:37:58.49:58,0,411	1/1:10,0:10:2.52:24,3,0	0/0:4,0:5:5.85:0,6,49	./.	0/0:1,0:1:2.99:0,3,24	0/1:6,1:7:31.91:32,0,124	./.	0/1:14,0:14:0:0,0,0	0/0:5,0:5:5.75:0,6,47	0/1:10,0:10:0.67:1,0,15	0/0:11,0:11:9.11:0,9,103	0/0:9,0:8:8:0,8,60	./.	0/0:6,0:6:8.76:0,9,82	./.	./.	./.	0/0:3,0:3:3.01:0,3,35	0/0:5,0:5:10.11:0,10,107	0/0:11,0:11:18.01:0,18,195	0/1:6,2:8:92.41:92,0,119
chr10	29924581	.	C	CAT	412.17	PASS	AB=0.643;AC=7;AF=0.146;AN=48;BaseQRankSum=4.749;DP=170;FS=4.200;HRun=0;HaplotypeScore=25.4081;InbreedingCoeff=0.5170;MQ=61.41;MQ0=1;MQRankSum=-0.220;QD=13.74;ReadPosRankSum=3.538;VQSLOD=2.7105;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:3,0:3:9.01:0,9,98	0/0:1,0:1:3.01:0,3,38	./.	0/0:15,0:5:2.84:0,3,38	0/0:6,0:6:15.05:0,15,188	0/0:3,0:3:6.02:0,6,76	./.	0/0:28,0:28:41.16:0,41,516	1/1:3,0:4:5.54:50,6,0	0/0:8,0:8:24.08:0,24,302	0/0:1,0:1:3.01:0,3,37	0/0:5,0:5:15.03:0,15,174	0/0:7,0:7:13.80:0,14,173	0/0:6,0:6:15.03:0,15,174	1/1:0,5:5:9.03:150,9,0	0/0:5,0:5:15.05:0,15,188	1/1:1,11:12:15.05:249,15,0	0/1:4,5:9:25.26:91,0,25	0/0:10,0:10:24.04:0,24,289	0/0:3,0:3:6.02:0,6,75	0/0:4,0:4:6.02:0,6,76	./.	0/0:4,0:4:12.04:0,12,150	./.	0/0:6,0:6:18.06:0,18,226	0/0:5,0:5:9.03:0,9,113	0/0:7,0:7:18.06:0,18,227	0/0:10,0:10:22.69:0,23,220
chr10	29924833	.	G	GA	376.40	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-3.561;DP=515;FS=0.983;HRun=7;HaplotypeScore=50.4339;InbreedingCoeff=0.9171;MQ=85.73;MQ0=0;MQRankSum=0.016;QD=23.52;ReadPosRankSum=0.670;VQSLOD=3.6732;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:66.11:0,66,637	0/0:3,0:3:9.01:0,9,87	0/0:19,0:19:39.80:0,40,349	0/0:19,0:19:15.25:0,15,238	0/0:20,0:20:48.07:0,48,463	0/0:18,0:18:50.10:0,50,465	0/0:21,0:21:57.09:0,57,550	0/0:31,0:31:66.09:0,66,637	1/1:2,14:16:39.12:471,39,0	0/0:21,0:21:57.08:0,57,547	0/0:13,0:13:39.04:0,39,370	0/0:22,0:22:66.10:0,66,632	0/0:17,0:17:45.03:0,45,419	0/0:22,0:22:60.10:0,60,579	0/0:19,0:19:57.08:0,57,546	0/0:21,1:22:29.86:0,30,568	0/0:21,0:21:57.02:0,57,533	0/0:16,0:16:48.08:0,48,463	0/0:18,0:18:45.01:0,45,423	0/0:16,0:16:45.07:0,45,434	0/0:18,0:18:48.06:0,48,457	0/0:11,0:11:33.05:0,33,319	0/0:12,0:12:36.04:0,36,341	0/0:18,0:18:54.07:0,54,514	0/0:20,0:20:57.08:0,57,546	0/0:21,0:21:51.07:0,51,487	0/0:32,0:31:90.14:0,90,868	0/0:6,0:6:15.02:0,15,145
chr10	29926266	.	T	TTAG	7014.66	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-11.874;DP=672;FS=0.400;HRun=0;HaplotypeScore=89.1020;InbreedingCoeff=0.9792;MQ=80.77;MQ0=0;MQRankSum=-0.759;QD=66.18;ReadPosRankSum=2.484;VQSLOD=6.5477;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,105,1957	0/0:10,0:10:30.10:0,30,557	0/0:18,0:18:54.14:0,54,884	0/0:22,0:22:47.90:0,48,744	0/0:30,0:30:90.20:0,90,1603	0/0:15,0:15:45.15:0,45,838	0/0:27,0:27:81.26:0,81,1468	0/0:29,0:29:84.29:0,84,1555	1/1:0,26:26:72.25:1772,72,0	0/0:25,0:25:75.23:0,75,1336	0/0:22,0:22:66.23:0,66,1221	0/0:31,0:31:93.29:0,93,1677	0/0:22,0:22:66.23:0,66,1227	0/0:25,0:25:75.24:0,75,1367	1/1:1,29:30:81.28:1994,81,0	0/0:28,1:29:10.31:0,10,1404	1/1:2,24:28:72.25:1697,72,0	1/1:1,21:22:63.22:1551,63,0	0/0:27,0:27:78.25:0,78,1408	0/0:28,0:28:84.29:0,84,1558	0/0:25,0:25:75.24:0,75,1323	0/0:18,0:18:54.19:0,54,1007	0/0:20,0:20:57.20:0,57,1062	0/0:21,0:21:60.21:0,60,1118	0/0:22,0:22:66.23:0,66,1222	0/0:31,0:31:90.26:0,90,1557	0/0:29,0:29:81.28:0,81,1505	0/0:4,0:4:12.04:0,12,224
chr10	29926851	.	AC	A	2415.24	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=11.226;DP=737;FS=5.367;HRun=1;HaplotypeScore=75.5687;InbreedingCoeff=0.9991;MQ=86.31;MQ0=0;MQRankSum=-0.892;QD=33.09;ReadPosRankSum=2.340;VQSLOD=3.4054;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,144,2270	0/0:8,0:8:24.08:0,24,384	0/0:25,0:25:72.24:0,72,1115	0/0:33,0:33:75.60:0,76,1415	0/0:24,0:24:72.23:0,72,1126	0/0:15,0:15:42.13:0,42,648	0/0:27,0:27:81.28:0,81,1294	0/0:32,0:32:93.32:0,93,1487	0/0:16,0:16:48.16:0,48,767	0/0:24,0:24:69.23:0,69,1083	0/0:19,0:19:51.16:0,51,782	0/0:32,0:32:96.30:0,96,1488	0/0:25,0:25:75.24:0,75,1174	0/0:26,0:26:78.25:0,78,1220	1/1:0,25:25:66.22:922,66,0	0/0:32,0:32:96.33:0,96,1532	1/1:0,27:26:63.21:881,63,0	1/1:0,21:21:54.18:755,54,0	0/0:23,0:23:69.21:0,69,1063	0/0:28,0:28:84.26:0,84,1317	0/0:36,0:36:99:0,108,1696	0/0:26,0:26:75.24:0,75,1173	0/0:22,0:22:63.21:0,63,1003	0/0:35,0:35:99:0,105,1538	0/0:31,0:31:93.30:0,93,1461	0/0:27,0:27:81.25:0,81,1250	0/0:39,0:39:99:0,114,1798	0/0:10,0:10:30.10:0,30,479
chr10	29927073	.	G	GC	1466.38	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=11.183;DP=661;FS=11.556;HRun=0;HaplotypeScore=76.4235;InbreedingCoeff=0.9973;MQ=60.03;MQ0=0;MQRankSum=-10.100;QD=25.28;ReadPosRankSum=0.241;VQSLOD=3.5058;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:81.27:0,81,1120	0/0:18,0:18:54.18:0,54,755	0/0:9,0:9:24.06:0,24,317	0/0:12,0:9:27.07:0,27,348	0/0:27,0:27:75.22:0,75,1009	0/0:31,0:31:90.26:0,90,1236	0/0:16,0:16:48.13:0,48,650	0/0:39,0:39:99:0,117,1606	0/0:21,0:21:63.20:0,63,864	0/0:25,0:25:75.24:0,75,1035	0/0:26,0:26:78.26:0,78,1090	0/0:33,0:33:96.25:0,96,1282	0/0:27,0:27:81.27:0,81,1133	0/0:22,0:22:66.06:0,66,877	1/1:4,29:33:81.58:967,82,0	0/0:24,0:24:72.22:0,72,974	1/1:4,8:11:25.56:261,26,0	1/1:4,9:13:27.61:381,28,0	0/0:23,0:23:63.20:0,63,864	0/0:31,0:31:90.29:0,90,1239	0/0:20,0:20:60.20:0,60,838	0/0:27,0:27:81.26:0,81,1107	0/0:25,0:25:72.23:0,72,988	0/0:21,0:21:63.19:0,63,862	0/0:22,0:22:63.21:0,63,880	0/0:34,0:34:99:0,99,1353	0/0:34,0:34:99:0,102,1390	0/0:9,0:9:24.08:0,24,333
chr10	29927090	.	AT	A	1425.32	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=11.417;DP=648;FS=3.817;HRun=9;HaplotypeScore=76.8878;InbreedingCoeff=0.9463;MQ=62.80;MQ0=0;MQRankSum=-4.198;QD=17.60;ReadPosRankSum=-0.026;VQSLOD=3.8229;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:66.20:0,66,762	0/0:14,0:14:24.07:0,24,277	0/0:7,0:6:8.05:0,8,75	0/0:9,0:6:6.02:0,6,69	0/0:29,0:29:58.32:0,58,855	0/0:26,0:26:72.21:0,72,831	0/0:18,0:18:46.38:0,46,522	0/0:38,0:38:90.24:0,90,1013	1/1:2,20:22:22.41:460,22,0	0/0:27,0:27:69.19:0,69,782	0/0:31,0:31:84.23:0,84,953	0/0:34,0:34:84.06:0,84,931	0/0:24,0:24:60.17:0,60,684	0/0:24,0:24:54.14:0,54,612	1/1:4,28:32:72.02:658,72,0	0/0:21,0:21:57.14:0,57,638	1/1:3,10:13:27.01:247,27,0	1/1:5,9:14:24.01:220,24,0	0/0:28,0:28:79.74:0,80,878	0/0:31,0:31:81.03:0,81,924	0/0:21,0:23:62.85:0,63,687	0/0:25,0:26:73.60:0,74,814	0/0:19,0:19:42.12:0,42,485	0/0:24,1:25:38.71:0,39,689	0/0:19,0:20:60:0,60,664	0/0:27,0:28:72.02:0,72,793	0/0:33,0:33:90.27:0,90,1039	0/0:7,0:7:15.04:0,15,173
chr10	29927375	.	TTTTGTTTG	T	2663.97	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.207;DP=761;FS=2.169;HRun=0;HaplotypeScore=182.4549;InbreedingCoeff=0.9970;MQ=74.17;MQ0=0;MQRankSum=-9.846;QD=43.67;ReadPosRankSum=0.909;VQSLOD=3.7175;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,126,4844	0/0:15,0:15:42.14:0,42,1790	0/0:34,0:28:60.12:0,60,2099	0/0:30,0:29:58.44:0,58,1840	0/0:30,0:30:80.75:0,81,3147	0/0:21,0:21:60.20:0,60,2360	0/0:21,0:21:51.15:0,51,1771	0/0:41,0:41:99:0,105,4245	0/0:29,0:29:72.23:0,72,2732	0/0:37,0:37:99:0,99,3986	0/0:25,0:25:72.25:0,72,2849	0/0:28,0:28:75.26:0,75,3022	0/0:27,0:27:75.25:0,75,2833	0/0:30,0:30:90.28:0,90,3499	1/1:0,23:23:45.15:1208,45,0	0/0:28,0:28:78.26:0,78,3115	1/1:4,22:26:42.14:1114,42,0	1/1:4,8:12:18.06:483,18,0	0/0:21,0:21:51.18:0,51,1928	0/0:13,0:13:39.13:0,39,1570	0/0:41,0:41:99:0,108,4130	0/0:29,0:29:78.27:0,78,3177	0/0:26,0:26:69.23:0,69,2637	0/0:30,0:30:75.26:0,75,2981	0/0:24,0:24:63.22:0,63,2661	0/0:25,0:25:63.21:0,63,2419	0/0:35,0:35:99:0,99,3888	0/0:13,0:13:36.12:0,36,1514
chr10	29928496	.	A	AGC	1666.25	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.241;DP=605;FS=1.317;HRun=0;HaplotypeScore=84.1603;InbreedingCoeff=0.9893;MQ=73.53;MQ0=0;MQRankSum=-1.916;QD=24.87;ReadPosRankSum=1.394;VQSLOD=4.5583;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:78.22:0,78,1002	0/0:13,0:13:27.08:0,27,344	0/0:27,0:21:20.47:0,20,417	0/0:16,0:13:14.46:0,14,202	0/0:28,0:28:78.22:0,78,1000	0/0:18,0:18:51.15:0,51,659	0/0:27,0:27:63.17:0,63,789	0/0:26,0:26:54.14:0,54,657	0/0:22,0:22:57.14:0,57,707	0/0:18,0:18:48.15:0,48,623	0/0:25,0:25:69.13:0,69,815	0/0:20,0:20:57.13:0,57,693	0/0:15,0:15:36.10:0,36,462	0/0:27,0:27:75.22:0,75,964	1/1:14,6:20:36.11:582,36,0	0/0:15,0:15:39.11:0,39,503	1/1:2,31:35:54.18:924,54,0	1/1:2,9:12:19.88:302,20,0	0/0:16,0:16:42.13:0,42,546	0/0:22,0:22:57.17:0,57,742	0/0:31,0:31:81.20:0,81,1008	0/0:20,0:20:51.17:0,51,677	0/0:16,0:16:48.13:0,48,605	0/0:21,0:21:48.13:0,48,601	0/0:25,0:25:72.23:0,72,944	0/0:16,0:16:39.11:0,39,494	0/0:35,0:35:90.27:0,90,1166	0/0:11,0:11:30.03:0,30,336
chr10	29928511	.	TTG	T	489.66	PASS	AB=0.889;AC=3;AF=0.054;AN=56;BaseQRankSum=5.345;DP=677;FS=7.612;HRun=0;HaplotypeScore=98.5485;InbreedingCoeff=0.5334;MQ=66.00;MQ0=7;MQRankSum=0.261;QD=12.89;ReadPosRankSum=1.956;VQSLOD=3.1046;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:38,1:39:58.71:0,59,1330	0/0:11,0:11:33.11:0,33,542	0/0:53,1:28:12.27:0,12,701	0/0:34,0:19:17.45:0,17,397	0/0:29,0:29:67.09:0,67,1018	0/0:18,0:18:42.14:0,42,687	0/0:28,0:28:63.22:0,63,1025	0/0:28,0:27:63.18:0,63,929	1/1:6,16:22:45.14:563,45,0	0/0:22,1:23:19.65:0,20,820	0/0:17,1:18:7.61:0,8,628	0/0:23,1:24:25.80:0,26,945	0/0:15,1:16:4.61:0,5,594	0/0:33,1:34:49.09:0,49,1025	0/0:20,0:20:16.27:0,16,446	0/1:14,2:16:32.83:33,0,551	0/0:36,0:36:63.21:0,63,959	0/0:10,0:10:21.51:0,22,283	0/0:20,0:20:54.18:0,54,810	0/0:20,0:20:45.14:0,45,713	0/0:27,0:27:75.26:0,75,1225	0/0:20,0:20:54.17:0,54,837	0/0:16,0:16:41.34:0,41,621	0/0:26,0:26:60.20:0,60,962	0/0:29,0:29:78.23:0,78,1223	0/0:20,0:20:48.16:0,48,789	0/0:31,1:32:40.75:0,41,1193	0/0:6,0:6:15.05:0,15,238
chr10	29928616	.	T	TGAGAGAGAGA	4114.05	PASS	AB=1.000;AC=40;AF=0.833;AN=48;BaseQRankSum=-6.982;DP=576;FS=0.000;HRun=0;HaplotypeScore=205.0071;InbreedingCoeff=0.4113;MQ=47.76;MQ0=15;MQRankSum=3.010;QD=9.57;ReadPosRankSum=3.066;VQSLOD=1.9206;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:33,0:32:14.35:250,14,0	1/1:8,0:8:3.01:35,3,0	./.	./.	1/1:24,0:24:3.82:87,4,0	1/1:19,0:18:9.50:187,10,0	1/1:21,0:21:12.47:189,12,0	1/1:26,0:24:24.05:479,24,0	0/1:18,0:17:76.35:76,0,209	1/1:20,0:19:33.17:528,33,0	0/0:19,0:19:3.38:0,3,7	0/1:24,0:24:0.32:0,0,2	1/1:10,0:10:6.02:206,6,0	1/1:24,2:26:27.44:504,27,0	0/0:17,0:24:10.74:0,11,74	1/1:19,0:19:6.20:87,6,0	1/1:13,0:15:10.85:160,11,0	1/1:5,0:5:5.90:37,6,0	1/1:15,0:16:13.43:162,13,0	1/1:28,0:28:13.07:180,13,0	1/1:22,0:20:13.15:194,13,0	1/1:17,0:16:3.83:109,4,0	./.	1/1:33,0:33:4.98:44,5,0	0/0:9,7:15:1.25:0,1,3	1/1:23,0:22:18.36:308,18,0	1/1:21,0:21:15.03:292,15,0	./.
chr10	29929590	.	C	CT	2923.66	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-10.322;DP=692;FS=1.592;HRun=0;HaplotypeScore=68.5206;InbreedingCoeff=0.9996;MQ=84.97;MQ0=0;MQRankSum=-3.108;QD=38.47;ReadPosRankSum=5.159;VQSLOD=3.9255;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,111,1499	0/0:9,0:9:27.05:0,27,352	0/0:24,0:24:69.16:0,69,907	0/0:22,0:22:59.37:0,59,747	0/0:20,0:20:60.14:0,60,796	0/0:26,0:26:72.22:0,72,971	0/0:24,0:24:72.24:0,72,1003	0/0:24,0:24:66.17:0,66,883	0/0:23,0:23:66.21:0,66,904	0/0:24,0:24:60.20:0,60,835	0/0:18,0:18:45.10:0,45,591	0/0:27,0:27:78.26:0,78,1089	0/0:26,0:26:78.20:0,78,1039	0/0:20,0:20:57.18:0,57,772	1/1:0,28:28:63.21:1007,63,0	0/0:18,0:18:54.17:0,54,737	1/1:0,34:34:93.32:1484,93,0	1/1:0,14:14:36.12:575,36,0	0/0:25,0:25:68.03:0,68,908	0/0:22,0:22:63.20:0,63,862	0/0:48,0:48:99:0,135,1841	0/0:32,0:32:69.10:0,69,934	0/0:19,0:19:54.18:0,54,734	0/0:36,0:36:99:0,102,1342	0/0:27,0:27:78.26:0,78,1079	0/0:22,0:22:66.01:0,66,828	0/0:28,0:28:81.23:0,81,1108	0/0:14,0:14:41.98:0,42,517
chr10	29931536	.	G	GTGTC	2942.92	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-6.264;DP=791;FS=2.629;HRun=0;HaplotypeScore=141.4796;InbreedingCoeff=0.9927;MQ=80.40;MQ0=2;MQRankSum=-2.624;QD=41.45;ReadPosRankSum=2.776;VQSLOD=3.8747;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:63.19:0,63,1072	0/0:7,0:7:21.06:0,21,345	0/0:48,0:39:15.42:0,15,1149	0/0:73,0:57:47.27:0,47,1316	0/0:23,0:23:69.20:0,69,1195	0/0:24,0:24:63.22:0,63,1121	0/0:25,0:25:63.20:0,63,1067	0/0:38,0:38:81.28:0,81,1424	0/0:27,0:27:63.22:0,63,1071	0/0:37,0:37:96.31:0,96,1636	0/0:21,0:21:57.18:0,57,968	0/0:37,0:37:99:0,99,1701	0/0:27,0:27:75.26:0,75,1318	0/0:27,0:27:69.22:0,69,1199	1/1:1,22:23:33.11:852,33,0	0/0:32,0:32:75.26:0,75,1328	1/1:3,23:27:57.20:1470,57,0	1/1:3,17:20:30.10:764,30,0	0/0:20,0:20:48.13:0,48,737	0/0:23,0:23:63.18:0,63,1060	0/0:25,0:25:60.17:0,60,985	0/0:14,0:14:39.13:0,39,677	0/0:32,0:32:96.31:0,96,1643	0/0:30,0:30:78.71:0,79,1378	0/0:25,0:25:63.20:0,63,1065	0/0:34,0:34:81.27:0,81,1392	0/0:30,0:30:78.25:0,78,1341	0/0:11,0:11:27.09:0,27,468
chr10	29932845	.	CCTCTATCTATCTTTCTTA	C	54123.74	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=6.051;DP=574;FS=3.054;HRun=0;HaplotypeScore=312.2983;InbreedingCoeff=0.9804;MQ=75.03;MQ0=1;MQRankSum=-10.041;QD=101.36;ReadPosRankSum=7.478;VQSLOD=4.0046;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:3,12:15:27.09:1399,27,0	1/1:2,7:9:21.07:1103,21,0	0/0:26,0:25:72.23:0,72,4758	0/0:14,0:14:39.97:0,40,1908	1/1:0,21:21:45.15:2279,45,0	1/1:4,22:26:54.19:2821,54,0	1/1:4,14:18:27.09:1404,27,0	1/1:9,12:21:36.08:1016,36,0	1/1:3,16:19:51.18:2678,51,0	1/1:3,23:26:66.21:2982,66,0	1/1:1,18:19:33.11:1592,33,0	1/1:3,14:17:39.13:2049,39,0	1/1:4,29:33:57.20:2995,57,0	1/1:3,23:26:54.19:2826,54,0	1/1:3,24:27:60.16:3008,60,0	1/1:4,22:26:54.19:2825,54,0	1/1:2,10:12:27.09:1412,27,0	1/1:4,11:15:18.06:830,18,0	1/1:2,11:13:33.06:1016,33,0	1/1:3,20:23:51.18:2658,51,0	1/1:3,13:16:16.20:931,16,0	1/1:4,19:23:48.16:2500,48,0	1/1:3,21:24:47.90:2436,48,0	1/1:3,8:11:17.81:941,18,0	1/1:1,16:17:27.09:1408,27,0	1/1:3,25:27:72.23:3275,72,0	1/1:4,31:35:84.29:4378,84,0	1/1:0,14:14:27.09:1360,27,0
chr10	29933284	.	TACATGAAAC	T	45516.03	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=3.735;DP=731;FS=3.548;HRun=0;HaplotypeScore=250.5144;InbreedingCoeff=0.9161;MQ=71.17;MQ0=0;MQRankSum=-10.789;QD=66.54;ReadPosRankSum=5.007;VQSLOD=4.7510;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,24:30:63.22:1919,63,0	1/1:0,15:15:36.12:1136,36,0	0/0:17,0:17:51.17:0,51,2190	0/0:30,0:30:84.29:0,84,3755	1/1:3,29:32:56.98:1386,57,0	1/1:3,19:22:45.15:1400,45,0	1/1:1,21:22:54.14:1631,54,0	1/1:8,25:33:75.20:2044,75,0	1/1:2,31:35:84.29:2651,84,0	1/1:2,23:25:69.22:2013,69,0	1/1:3,14:17:36.12:1127,36,0	1/1:3,35:38:96.33:3020,96,0	1/1:3,26:29:69.24:2180,69,0	1/1:2,26:28:75.26:2369,75,0	1/1:3,36:39:99:3126,99,0	1/1:3,37:40:89.91:2843,90,0	1/1:4,20:24:33.11:1040,33,0	1/1:1,11:12:33.11:1043,33,0	1/1:4,20:24:63.20:1875,63,0	1/1:1,24:25:66.18:2000,66,0	1/1:10,28:38:44.64:1195,45,0	1/1:1,24:25:51:1308,51,0	1/1:1,19:20:41.98:1284,42,0	1/1:8,24:32:32.36:1000,32,0	1/1:2,19:22:54.19:1699,54,0	1/1:2,26:28:77.33:2464,77,0	1/1:2,22:24:54.19:1667,54,0	1/1:2,3:5:3.01:95,3,0
chr10	29934469	.	G	GGTAA	36462.55	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=1.229;DP=731;FS=1.400;HRun=0;HaplotypeScore=117.3801;InbreedingCoeff=0.9994;MQ=79.60;MQ0=1;MQRankSum=-9.802;QD=66.42;ReadPosRankSum=1.776;VQSLOD=6.8773;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,25:28:75.25:1847,75,0	1/1:0,10:12:30.06:795,30,0	0/0:21,0:21:63.20:0,63,1171	0/0:27,0:27:78.21:0,78,1488	1/1:0,25:27:74.94:1489,75,0	1/1:0,15:17:39.13:1129,39,0	1/1:0,22:26:51.18:1469,51,0	1/1:0,31:34:99:2624,102,0	0/0:32,0:32:96.31:0,96,1924	1/1:0,32:36:99:2607,99,0	1/1:0,14:16:38.92:794,39,0	1/1:1,28:33:72.25:2063,72,0	1/1:0,21:22:54.19:1563,54,0	1/1:0,24:26:69.24:1961,69,0	0/0:38,0:38:99:0,114,2275	1/1:0,20:24:51.18:1464,51,0	0/0:41,0:41:99:0,117,2289	0/0:23,0:23:69.24:0,69,1420	1/1:0,13:17:51.13:1195,51,0	1/1:0,27:32:87.18:2194,87,0	1/1:1,31:36:75.17:1947,75,0	1/1:0,26:30:86.99:2299,87,0	1/1:0,25:28:75.26:2160,75,0	1/1:0,26:27:54.19:1564,54,0	1/1:0,16:18:39.13:1080,39,0	1/1:0,17:19:57.15:1513,57,0	1/1:0,30:32:71.99:2012,72,0	1/1:0,8:8:24.08:695,24,0
chr10	29936803	.	C	CTCTATCTA	1250.84	PASS	AB=0.950;AC=14;AF=0.269;AN=52;BaseQRankSum=6.680;DP=531;FS=5.495;HRun=0;HaplotypeScore=142.0977;InbreedingCoeff=0.6922;MQ=75.70;MQ0=8;MQRankSum=-3.709;QD=7.63;ReadPosRankSum=-1.000;VQSLOD=2.0458;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:21,0:21:3.57:4,0,521	0/0:6,0:6:9.03:0,9,137	./.	./.	0/0:23,0:24:39.13:0,39,920	0/0:17,0:17:21.07:0,21,463	0/0:5,0:5:3.01:0,3,74	1/1:49,0:46:2.97:20,3,0	1/1:7,11:17:2.94:86,3,0	0/0:22,0:21:30.09:0,30,619	0/0:25,0:25:33.10:0,33,679	1/1:4,0:9:8.98:73,9,0	0/1:8,0:9:3.32:3,0,423	0/0:12,0:12:18.06:0,18,370	1/1:23,0:23:27.09:845,27,0	0/0:18,0:18:21.04:0,21,418	1/1:24,0:24:18:209,18,0	1/1:10,0:10:9.03:171,9,0	0/0:17,0:17:18.06:0,18,385	0/0:33,0:33:69.22:0,69,1621	0/0:7,0:7:15.05:0,15,336	0/0:3,0:3:6.01:0,6,99	0/0:25,0:25:35.99:0,36,622	0/0:13,0:13:21.07:0,21,512	0/0:21,0:21:36.11:0,36,835	0/0:16,0:17:20.99:0,21,499	0/0:27,0:27:39.13:0,39,926	0/0:20,0:20:24.08:0,24,592
chr10	29936837	.	C	CTATCTATA	1050.59	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=7.295;DP=575;FS=6.581;HRun=0;HaplotypeScore=136.0093;InbreedingCoeff=0.1892;MQ=71.39;MQ0=27;MQRankSum=-3.979;QD=7.25;ReadPosRankSum=0.708;VQSLOD=2.0325;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:24.09:0,24,719	0/0:7,0:7:15.02:0,15,259	0/0:37,0:10:10.81:0,11,77	0/1:56,0:23:3.64:4,0,24	0/0:27,0:27:75.06:0,75,1329	0/0:17,0:17:45.04:0,45,747	0/0:8,0:8:20.97:0,21,229	0/0:52,0:47:99:0,129,1101	0/1:18,0:17:44.65:45,0,146	0/0:20,0:19:51.06:0,51,941	0/0:25,0:25:62.86:0,63,1078	0/1:12,0:10:16.41:16,0,98	0/0:13,0:13:25.58:0,26,625	0/0:15,0:15:39.04:0,39,623	1/1:2,19:22:27.09:1001,27,0	0/0:11,0:11:30.05:0,30,577	0/1:25,0:25:29.91:30,0,217	0/1:10,0:10:82.89:87,0,83	0/0:18,0:16:48.02:0,48,730	0/0:37,0:37:99:0,105,2129	0/0:8,0:8:24.04:0,24,469	0/0:3,0:3:9.02:0,9,156	0/0:22,0:22:54.10:0,54,957	0/0:13,0:13:27.07:0,27,621	0/0:21,0:21:54.11:0,54,1099	0/0:16,0:16:42.09:0,42,743	0/0:25,0:25:69.06:0,69,1282	0/0:15,0:13:36.06:0,36,750
chr10	29936906	.	CTCTA	C	790.65	PASS	AB=0.822;AC=8;AF=0.148;AN=54;BaseQRankSum=2.986;DP=602;FS=0.850;HRun=0;HaplotypeScore=118.2114;InbreedingCoeff=0.6377;MQ=67.82;MQ0=26;MQRankSum=-0.658;QD=9.30;ReadPosRankSum=2.596;VQSLOD=3.0133;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:27:38.90:0,39,917	0/0:6,0:6:12.04:0,12,257	./.	0/0:77,0:24:0.47:0,0,1	0/0:25,0:24:36.11:0,36,772	0/0:16,0:16:21.07:0,21,434	0/1:13,0:13:15.33:15,0,416	0/0:37,0:35:18.06:0,18,291	0/0:11,0:13:14.24:0,14,129	0/0:25,0:25:63.22:0,63,1390	0/0:24,0:24:42.04:0,42,887	0/0:18,0:18:33.11:0,33,724	0/0:24,0:24:51.17:0,51,1169	0/0:17,0:17:24.08:0,24,565	0/0:18,0:18:24.08:0,24,518	0/0:7,0:17:36.12:0,36,601	0/1:13,16:29:8.79:305,0,9	0/0:13,1:13:21.44:0,21,527	1/1:9,4:13:12.04:188,12,0	1/1:10,12:22:21.07:329,21,0	1/1:5,3:8:6.02:94,6,0	0/0:11,0:11:30.10:0,30,705	0/0:24,0:24:45.13:0,45,871	0/0:9,0:9:15.05:0,15,322	0/0:25,0:25:54.19:0,54,1238	0/0:16,0:16:30.10:0,30,650	0/0:24,0:24:51.17:0,51,1104	0/0:7,0:7:8.51:0,9,43
chr10	29937606	.	CGT	C	5771.26	PASS	AB=0.706;AC=40;AF=0.714;AN=56;BaseQRankSum=-6.502;DP=751;FS=1.925;HRun=0;HaplotypeScore=132.3900;InbreedingCoeff=0.5499;MQ=71.85;MQ0=3;MQRankSum=3.307;QD=9.90;ReadPosRankSum=2.256;VQSLOD=4.5695;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:19,12:33:12.53:261,0,13	1/1:9,5:14:11.58:125,12,0	0/0:31,0:25:0:0,0,0	0/0:38,0:27:6.49:0,6,88	0/1:20,7:30:16.18:182,0,16	1/1:14,8:24:17.71:161,18,0	1/1:12,7:23:23.74:227,24,0	1/1:24,3:27:7.27:93,7,0	0/0:18,0:19:14.32:0,14,94	1/1:19,3:26:23.39:189,23,0	1/1:15,7:24:32.80:315,33,0	1/1:13,13:30:41.61:408,42,0	1/1:10,11:23:32.75:320,33,0	1/1:18,9:29:23.89:247,24,0	0/0:40,0:40:56.78:0,57,437	1/1:17,17:37:53.31:502,53,0	0/0:21,1:22:8.27:0,8,267	0/0:18,0:18:26.96:0,27,252	1/1:13,6:20:16.14:177,16,0	1/1:15,6:20:9.02:100,9,0	1/1:29,10:42:29.58:275,30,0	0/1:11,9:21:25.88:129,0,26	1/1:13,8:24:26.48:241,26,0	1/1:7,20:33:67.72:654,68,0	1/1:12,15:28:38.94:413,39,0	0/1:18,12:32:9.57:282,0,10	1/1:12,3:21:18.01:142,18,0	1/1:6,13:21:32.75:327,33,0
chr10	29937637	.	G	GTA	2088.82	PASS	AB=0.544;AC=6;AF=0.107;AN=56;BaseQRankSum=-7.102;DP=781;FS=1.222;HRun=0;HaplotypeScore=130.6874;InbreedingCoeff=0.6011;MQ=56.90;MQ0=15;MQRankSum=-1.042;QD=18.65;ReadPosRankSum=5.685;VQSLOD=3.5420;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:77.77:0,78,634	0/0:11,0:11:23.75:0,24,192	0/0:24,0:4:2.65:0,3,62	0/0:42,0:12:24.67:0,25,205	0/0:32,0:32:68.74:0,69,551	0/0:13,0:13:26.89:0,27,207	0/0:19,0:19:48.27:0,48,373	0/0:23,0:23:58.26:0,58,463	0/1:2,0:26:10.08:90,0,10	0/0:26,0:26:73.58:0,74,578	0/0:24,0:23:62.79:0,63,505	0/0:33,0:33:83.75:0,84,666	0/0:27,0:27:68.76:0,69,544	0/0:28,0:28:62.06:0,62,483	1/1:2,37:39:49.85:1085,50,0	0/0:42,0:42:99:0,108,852	1/1:3,23:26:22.67:733,23,0	0/1:5,16:21:26.75:316,0,27	0/0:17,0:15:41.49:0,41,329	0/0:22,0:20:41.89:0,42,332	0/0:50,0:49:93.65:0,94,858	0/0:22,0:22:35.48:0,35,280	0/0:25,0:25:59.56:0,60,469	0/0:41,0:40:99:0,107,829	0/0:33,0:33:68.78:0,69,545	0/0:34,0:34:86.70:0,87,724	0/0:25,0:25:56.59:0,57,438	0/0:19,0:19:41.81:0,42,320
chr10	29938002	.	TGCACGCGCGCGC	T	4604.37	PASS	AB=0.957;AC=16;AF=0.286;AN=56;BaseQRankSum=8.561;DP=400;FS=46.847;HRun=0;HaplotypeScore=169.9190;InbreedingCoeff=-0.3306;MQ=48.68;MQ0=1;MQRankSum=-7.244;QD=20.02;ReadPosRankSum=6.197;VQSLOD=2.5414;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,3:26:4.99:0,5,104	0/0:1,0:1:2.99:0,3,24	1/1:9,0:2:0.47:1,0,0	0/0:10,0:2:3.89:0,4,33	0/1:21,0:21:88.92:89,0,141	0/1:14,0:14:72.47:72,0,106	0/0:16,1:17:18.32:0,18,150	0/1:26,0:26:99:253,0,329	0/0:7,0:7:21.03:0,21,460	0/1:22,2:24:99:1142,0,160	0/0:8,0:9:6:0,6,51	0/1:15,2:17:42.92:336,0,43	0/1:7,1:8:15.97:157,0,16	0/1:15,0:15:7.11:315,0,7	0/0:7,0:7:18.03:0,18,356	0/1:9,1:10:31.93:335,0,32	0/0:32,0:31:87.18:0,87,1937	0/0:17,0:17:20.94:0,21,438	0/1:14,0:14:99:393,0,139	0/0:13,0:13:5.97:0,6,46	0/0:11,0:10:11.97:0,12,96	0/0:8,0:8:8.81:0,9,74	0/0:11,1:12:11.99:0,12,100	0/1:13,0:13:16.56:70,0,17	0/1:13,0:16:55.93:108,0,56	0/1:13,0:14:79.84:740,0,80	0/1:10,0:10:32.96:154,0,33	0/1:19,0:19:99:439,0,132
chr10	29938005	.	ACGCGCGCGCGCG	A	6373.02	PASS	AC=32;AF=0.727;AN=44;BaseQRankSum=-1.934;DP=377;FS=12.521;HRun=0;HaplotypeScore=157.4675;InbreedingCoeff=0.7200;MQ=48.50;MQ0=1;MQRankSum=-4.362;QD=26.55;ReadPosRankSum=-0.580;VQSLOD=3.5585;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:18,5:23:7.36:58,7,0	./.	0/0:7,0:1:1.55:0,2,4	./.	1/1:14,7:21:9.03:190,9,0	1/1:6,6:12:6.48:130,6,0	0/0:13,3:16:0.47:0,0,1	1/1:15,8:23:24.01:489,24,0	0/0:7,0:7:12:0,12,358	1/1:12,11:23:42.14:1440,42,0	./.	1/1:11,5:17:18.06:463,18,0	1/1:4,4:8:6.02:202,6,0	1/1:5,9:14:14.87:437,15,0	0/0:7,0:7:12.04:0,12,276	1/1:4,6:10:12.04:409,12,0	0/0:27,0:30:72.24:0,72,1475	0/0:4,0:18:15.04:0,15,379	1/1:7,5:12:18.06:562,18,0	./.	./.	1/1:2,5:7:0.47:1,0,0	./.	1/1:8,4:13:4.84:94,5,0	1/1:11,0:15:9.03:200,9,0	1/1:9,5:14:27.09:905,27,0	1/1:7,2:9:6.02:203,6,0	1/1:9,9:19:15.57:591,16,0
chr10	29938020	.	CGCGCGCGCGCGCGA	C	6135.98	PASS	AB=0.895;AC=29;AF=0.604;AN=48;BaseQRankSum=0.433;DP=375;FS=25.483;HRun=0;HaplotypeScore=183.4672;InbreedingCoeff=0.3420;MQ=43.15;MQ0=4;MQRankSum=-5.047;QD=22.07;ReadPosRankSum=1.581;VQSLOD=2.5841;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:31,1:32:1.89:74,0,2	./.	./.	./.	1/1:20,1:21:12.76:201,13,0	1/1:8,1:9:6.48:130,6,0	0/1:15,3:18:15.15:15,0,19	1/1:17,0:15:2.88:470,3,0	0/0:5,0:5:12:0,12,364	1/1:19,1:20:18.01:1300,18,0	./.	1/1:20,0:20:20.74:455,21,0	0/1:10,2:12:19.63:210,0,20	1/1:16,1:17:15.99:410,16,0	0/0:7,0:6:15.04:0,15,335	1/1:10,0:10:15.05:434,15,0	0/0:33,0:32:71.98:0,72,1671	0/0:19,0:19:21.06:0,21,544	1/1:10,0:10:4.02:528,4,0	0/0:2,9:11:2.50:0,2,9	0/1:9,0:7:12.11:18,0,12	0/1:7,0:7:0:0,0,0	0/0:9,0:9:0:0,0,0	1/1:19,0:19:7.84:131,8,0	1/1:16,0:15:9.50:200,10,0	0/1:15,2:17:7.94:819,0,8	0/1:6,5:11:3.55:196,0,4	1/1:13,0:12:15.12:544,15,0
chr10	29938066	.	A	AGC	3190.72	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=1.104;DP=462;FS=5.786;HRun=0;HaplotypeScore=124.5887;InbreedingCoeff=0.4769;MQ=58.71;MQ0=8;MQRankSum=-1.131;QD=7.30;ReadPosRankSum=2.507;VQSLOD=3.0442;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:29:8.88:94,9,0	1/1:4,0:4:2.84:14,3,0	0/0:9,0:6:17.97:0,18,156	0/0:8,0:6:2.14:0,2,66	1/1:18,0:18:2.99:32,3,0	1/1:17,0:17:2.98:22,3,0	1/1:25,0:25:5.80:45,6,0	1/1:32,0:30:65.96:457,66,0	0/0:8,0:8:7.24:0,7,70	1/1:19,0:18:26.97:257,27,0	1/1:7,0:6:8.94:65,9,0	1/1:23,0:23:8.04:44,8,0	1/1:15,0:15:2.19:33,2,0	1/1:22,0:22:8.83:56,9,0	1/1:10,0:9:15.45:123,15,0	1/1:21,0:21:10.26:77,10,0	1/1:6,20:26:17.54:174,18,0	1/1:23,0:23:44.94:464,45,0	1/1:15,0:15:40.11:269,40,0	1/1:4,0:4:6:54,6,0	1/1:18,0:17:20.20:128,20,0	1/1:8,0:8:2.83:24,3,0	1/1:11,0:11:11.78:85,12,0	1/1:24,0:24:5.99:57,6,0	1/1:14,0:13:3:28,3,0	1/1:20,0:20:38.09:302,38,0	1/1:18,0:16:31.21:256,31,0	1/1:12,0:10:26.91:163,27,0
chr10	29938069	.	G	GCA	5933.34	PASS	AB=1.000;AC=48;AF=0.857;AN=56;BaseQRankSum=1.588;DP=487;FS=8.600;HRun=0;HaplotypeScore=122.8378;InbreedingCoeff=0.4015;MQ=60.39;MQ0=5;MQRankSum=-3.289;QD=12.84;ReadPosRankSum=1.091;VQSLOD=4.3395;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,23:35:9.36:156,9,0	1/1:0,6:6:3.01:31,3,0	0/0:10,0:7:20.60:0,21,223	0/0:8,0:6:9.03:0,9,117	1/1:4,15:19:3:56,3,0	1/1:3,14:17:3.01:44,3,0	1/1:6,20:26:6.01:89,6,0	1/1:7,28:35:81.67:1094,82,0	0/0:7,0:7:11.91:0,12,140	1/1:16,3:18:25.57:593,26,0	1/1:7,0:6:9.03:138,9,0	1/1:2,22:24:8.76:110,9,0	1/1:3,12:15:5.54:70,6,0	1/1:3,22:26:9.03:107,9,0	0/1:10,0:9:8.63:9,0,25	1/1:1,21:22:14.63:168,15,0	0/1:27,0:26:22.56:23,0,31	1/1:22,0:22:1.59:118,2,0	1/1:1,16:18:48.08:594,48,0	1/1:3,0:3:9.01:128,9,0	1/1:18,0:18:32.98:383,33,0	1/1:7,0:7:2.84:48,3,0	1/1:10,2:12:15.04:207,15,0	1/1:2,24:26:6.02:97,6,0	1/1:2,4:14:2.75:37,3,0	1/1:5,16:21:54.11:738,54,0	1/1:15,2:16:36.08:522,36,0	1/1:10,2:11:30.07:374,30,0
chr10	29938369	.	TGCATGC	T	3154.30	PASS	AB=0.984;AC=29;AF=0.518;AN=56;BaseQRankSum=12.558;DP=645;FS=0.000;HRun=0;HaplotypeScore=248.4069;InbreedingCoeff=-0.4923;MQ=77.43;MQ0=4;MQRankSum=-6.042;QD=5.94;ReadPosRankSum=8.500;VQSLOD=1.0809;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:34,0:33:9.92:196,0,10	1/1:3,0:3:5.97:45,6,0	0/0:37,0:27:58.67:0,59,1306	0/0:47,0:38:83.03:0,83,1955	0/1:16,0:16:28.24:46,0,28	0/1:34,0:34:13.87:194,0,14	0/1:33,0:33:23.35:23,0,36	0/1:21,0:21:95.42:128,0,95	0/0:29,0:29:58.04:0,58,1652	1/1:25,0:25:24.57:418,25,0	0/1:5,0:5:2.33:12,0,2	1/1:26,1:27:3.92:52,4,0	0/1:24,0:24:37.12:209,0,37	0/1:18,0:18:37.49:116,0,37	0/1:25,0:25:99:198,0,106	0/1:25,0:25:99:164,0,105	0/1:27,0:27:69.50:184,0,70	0/1:16,1:17:47.69:182,0,48	0/1:23,1:24:99:239,0,114	0/1:16,0:15:13.21:67,0,13	0/1:33,0:33:55.67:56,0,72	0/1:16,3:19:18.43:33,0,18	0/1:19,0:19:31.71:125,0,32	0/1:33,0:32:53.67:54,0,57	0/1:11,0:11:4.12:117,0,4	0/1:20,0:20:58.29:184,0,58	1/1:13,0:12:4.97:182,5,0	0/1:8,1:9:43.79:93,0,44
chr10	29938375	.	CGCGT	C	5288.67	PASS	AB=1.000;AC=48;AF=0.857;AN=56;BaseQRankSum=8.342;DP=602;FS=0.491;HRun=0;HaplotypeScore=216.4909;InbreedingCoeff=0.4703;MQ=67.30;MQ0=7;MQRankSum=-4.847;QD=10.79;ReadPosRankSum=4.652;VQSLOD=4.1909;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:34,0:33:9.54:187,10,0	1/1:3,0:3:5.59:26,6,0	0/0:37,0:23:50.87:0,51,1056	0/0:50,0:31:80.28:0,80,1601	1/1:15,0:15:9.40:64,9,0	1/1:32,0:32:6.58:160,7,0	1/1:31,0:31:5.95:55,6,0	1/1:18,0:18:13.71:246,14,0	0/0:25,0:25:51.63:0,52,1262	1/1:21,0:21:55.89:385,56,0	1/1:5,0:5:0.40:8,0,0	1/1:26,0:27:8.46:57,8,0	1/1:23,0:23:28.76:217,29,0	1/1:16,0:16:11.88:154,12,0	1/1:23,0:23:54.14:800,54,0	1/1:20,0:20:2.12:143,2,0	1/1:20,5:25:57.19:882,57,0	1/1:14,2:16:33.11:539,33,0	1/1:17,0:17:40.67:282,41,0	1/1:15,0:14:7.23:60,7,0	1/1:30,0:30:11.28:88,11,0	1/1:18,0:18:2.84:15,3,0	1/1:21,0:20:2.06:202,2,0	0/1:29,0:28:5.60:105,0,6	1/1:12,0:11:20.10:149,20,0	1/1:18,0:18:18.95:217,19,0	1/1:13,0:12:6.08:157,6,0	0/1:8,0:8:6.50:91,0,6
chr10	29938377	.	CGT	C	2699.29	PASS	AB=1.000;AC=35;AF=0.625;AN=56;BaseQRankSum=11.184;DP=597;FS=5.213;HRun=0;HaplotypeScore=210.2085;InbreedingCoeff=-0.1408;MQ=64.64;MQ0=7;MQRankSum=-7.791;QD=5.59;ReadPosRankSum=8.434;VQSLOD=2.1941;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:32:44.48:64,0,44	0/1:3,0:3:2.43:8,0,2	0/0:38,0:22:47.76:0,48,781	0/0:51,0:30:79.09:0,79,1092	1/1:14,1:15:1.06:19,1,0	0/1:31,0:31:44.64:61,0,45	0/1:31,0:31:11.09:11,0,37	0/1:16,0:16:5.02:85,0,5	0/0:25,0:25:51.63:0,52,898	1/1:21,0:21:9.44:154,9,0	1/1:5,0:5:5.87:35,6,0	0/1:28,0:28:37.07:71,0,37	0/1:22,0:22:33.54:119,0,34	0/1:16,0:16:6.89:94,0,7	1/1:7,15:22:53.98:509,54,0	0/1:20,0:20:43:93,0,43	1/1:14,10:24:57.01:575,57,0	1/1:9,6:15:17.98:309,18,0	0/1:16,0:16:2.57:60,0,3	0/1:15,0:14:23.03:23,0,35	1/1:31,0:31:8.94:45,9,0	1/1:19,0:19:2.84:15,3,0	0/1:22,0:21:10.22:110,0,10	0/1:29,0:28:22.28:95,0,22	0/1:11,0:10:6.32:31,0,6	1/1:17,0:17:4.90:96,5,0	1/1:13,0:12:5.45:146,5,0	0/1:8,0:8:32.36:36,0,32
chr10	29938379	.	TGCGC	T	9025.95	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=6.430;DP=595;FS=0.000;HRun=0;HaplotypeScore=203.6960;InbreedingCoeff=0.8434;MQ=60.95;MQ0=7;MQRankSum=-4.025;QD=18.88;ReadPosRankSum=3.528;VQSLOD=4.4935;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:23,3:33:42:550,42,0	1/1:0,3:3:6.01:60,6,0	0/0:41,0:23:64.55:0,65,1063	0/0:50,1:29:78.80:0,79,1437	1/1:11,2:15:11.70:157,12,0	1/1:17,8:31:39.07:494,39,0	1/1:3,4:31:12.01:140,12,0	1/1:0,13:15:42.04:543,42,0	0/0:24,0:24:48.63:0,49,1161	1/1:0,17:21:60.17:828,60,0	1/1:3,2:6:5.99:57,6,0	1/1:5,5:28:26.57:232,27,0	1/1:12,5:22:47.96:556,48,0	1/1:9,4:15:32.96:383,33,0	1/1:19,0:19:45.07:494,45,0	1/1:9,6:19:36.05:438,36,0	1/1:23,0:23:56.34:567,56,0	1/1:15,0:15:34.60:353,35,0	1/1:3,13:17:47.87:637,48,0	1/1:6,5:13:15:175,15,0	1/1:21,2:30:14.93:201,15,0	1/1:6,12:18:2.97:33,3,0	1/1:15,3:21:24.07:324,24,0	1/1:23,3:28:33:392,33,0	1/1:8,1:11:21.05:313,21,0	1/1:2,14:17:33.42:496,33,0	1/1:3,5:13:30.08:366,30,0	1/1:6,1:8:18.04:237,18,0
chr10	29938381	.	CGCGTGT	C	4454.85	PASS	AB=1.000;AC=47;AF=0.839;AN=56;BaseQRankSum=8.315;DP=579;FS=0.000;HRun=0;HaplotypeScore=229.6158;InbreedingCoeff=0.5618;MQ=58.37;MQ0=8;MQRankSum=-4.616;QD=9.60;ReadPosRankSum=3.902;VQSLOD=2.8845;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:33,0:32:30.80:244,31,0	1/1:3,0:3:5.96:45,6,0	0/0:40,0:21:61.73:0,62,888	0/0:52,0:28:71.69:0,72,1207	1/1:14,0:14:8.70:61,9,0	1/1:29,0:29:25.90:198,26,0	1/1:31,0:31:5.89:37,6,0	0/1:16,0:16:0.57:133,0,1	0/0:23,0:23:48.95:0,49,1279	1/1:21,0:21:56.42:433,56,0	0/1:6,0:6:1.97:18,0,2	1/1:28,0:28:2.99:49,3,0	1/1:22,0:22:33.68:249,34,0	1/1:15,0:15:6.49:131,6,0	1/1:4,15:19:42.40:419,42,0	1/1:17,0:17:27.37:217,27,0	1/1:15,8:23:50.84:498,51,0	1/1:9,6:15:16.12:378,16,0	1/1:17,0:17:36.29:269,36,0	1/1:15,0:13:9:81,9,0	1/1:28,0:28:12.18:77,12,0	1/1:18,0:18:2.93:20,3,0	0/1:21,0:20:1.97:126,0,2	1/1:26,0:25:15.10:93,15,0	1/1:12,0:11:13.97:115,14,0	1/1:16,0:16:36.60:261,37,0	1/1:12,0:11:27.53:206,28,0	1/1:7,0:7:12.32:98,12,0
chr10	29938390	.	GTGTGTGTT	G	4757.22	PASS	AB=1.000;AC=47;AF=0.839;AN=56;BaseQRankSum=4.355;DP=565;FS=4.062;HRun=0;HaplotypeScore=232.0478;InbreedingCoeff=0.4356;MQ=45.60;MQ0=14;MQRankSum=-0.963;QD=10.21;ReadPosRankSum=8.040;VQSLOD=2.9934;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:28,2:29:19.65:308,20,0	1/1:3,3:6:7.79:111,8,0	0/0:36,0:17:33.11:0,33,724	0/0:42,0:18:34.14:0,34,678	1/1:11,2:13:2.63:40,3,0	1/1:21,8:29:16.46:282,16,0	1/1:28,3:30:4.94:59,5,0	1/1:17,0:17:18.88:148,19,0	0/0:21,0:21:36.98:0,37,768	1/1:15,2:17:35.95:427,36,0	1/1:6,1:7:5.89:63,6,0	1/1:16,5:21:13.72:152,14,0	1/1:16,3:19:30.82:385,31,0	1/1:9,5:14:17.53:247,18,0	0/1:25,0:24:14.11:100,0,14	1/1:12,6:18:24.02:358,24,0	0/1:28,0:28:63.45:63,0,84	0/1:17,0:17:47.80:90,0,48	1/1:15,1:16:23.22:257,23,0	1/1:10,4:12:4.94:108,5,0	1/1:32,2:31:8.16:101,8,0	1/1:17,2:19:2.87:40,3,0	1/1:17,3:19:12.03:187,12,0	1/1:24,3:26:23.96:328,24,0	1/1:8,1:8:9.02:133,9,0	1/1:14,1:14:21.03:290,21,0	1/1:10,4:13:26.14:348,26,0	1/1:5,1:6:11.87:130,12,0
chr10	29938392	.	GTGTGTT	G	4460.55	PASS	AB=0.962;AC=46;AF=0.821;AN=56;BaseQRankSum=3.690;DP=571;FS=0.000;HRun=0;HaplotypeScore=220.2627;InbreedingCoeff=0.4196;MQ=44.64;MQ0=17;MQRankSum=-0.255;QD=9.45;ReadPosRankSum=6.697;VQSLOD=3.3301;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:32,1:31:22.82:319,23,0	1/1:6,0:6:7.91:121,8,0	0/0:33,0:14:33.08:0,33,675	0/0:42,0:18:30.69:0,31,542	1/1:9,2:10:2.31:33,2,0	1/1:28,1:29:16.15:240,16,0	1/1:30,1:30:4.47:52,4,0	1/1:19,0:19:34.81:222,35,0	0/0:24,0:24:42.74:0,43,780	1/1:16,0:15:38.74:382,39,0	1/1:9,0:9:5.23:49,5,0	1/1:18,3:21:13.19:136,13,0	1/1:19,1:20:33.49:332,33,0	1/1:15,0:15:21.40:224,21,0	0/1:26,0:25:31.01:37,0,31	1/1:18,0:18:24.06:346,24,0	0/1:26,0:26:33.23:33,0,104	0/1:17,0:17:35.43:44,0,35	1/1:15,1:16:29.92:334,30,0	1/1:11,1:11:4.57:94,5,0	1/1:33,1:31:8.08:81,8,0	0/1:18,4:22:0.26:52,0,0	1/1:16,4:19:10.84:137,11,0	1/1:26,1:26:26.88:292,27,0	1/1:7,2:8:12:140,12,0	1/1:13,1:13:27.48:336,27,0	1/1:14,0:13:29.89:309,30,0	1/1:5,1:6:11.88:116,12,0
chr10	29938408	.	ATGTG	A	754.44	PASS	AB=0.797;AC=12;AF=0.240;AN=50;BaseQRankSum=1.369;DP=575;FS=10.040;HRun=0;HaplotypeScore=204.6397;InbreedingCoeff=0.4375;MQ=39.63;MQ0=25;MQRankSum=-3.391;QD=4.52;ReadPosRankSum=2.708;VQSLOD=1.7924;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:32:10.84:0,11,119	0/0:6,0:6:5.48:0,5,62	./.	./.	0/0:14,0:14:5.87:0,6,90	0/0:28,0:29:1.50:0,2,44	1/1:21,0:21:0.66:2,1,0	0/0:16,0:14:27.92:0,28,306	0/1:7,0:22:3.36:3,0,16	0/0:16,0:13:11.75:0,12,100	./.	0/0:23,0:24:5.92:0,6,57	0/0:22,0:22:15.13:0,15,130	0/1:18,0:17:5.33:5,0,41	1/1:10,16:25:21.91:333,22,0	0/0:15,0:16:8.72:0,9,86	1/1:14,13:27:13.36:303,13,0	1/1:9,10:18:6.21:236,6,0	0/0:18,0:16:3.06:0,3,191	0/0:16,0:14:3.01:0,3,46	1/1:33,0:30:0.47:1,0,0	0/0:22,0:22:4.46:0,4,16	0/0:20,0:20:4.88:0,5,15	0/0:35,0:35:17.04:0,17,177	0/0:17,0:16:9.03:0,9,137	0/0:17,0:14:14.90:0,15,143	0/0:18,0:17:13.19:0,13,140	0/0:6,0:6:6.45:0,6,60
chr10	29938434	.	ATG	A	2893.05	PASS	AB=0.924;AC=43;AF=0.768;AN=56;BaseQRankSum=-0.789;DP=598;FS=9.465;HRun=0;HaplotypeScore=150.3223;InbreedingCoeff=0.4559;MQ=42.62;MQ0=28;MQRankSum=1.536;QD=5.55;ReadPosRankSum=1.051;VQSLOD=2.3272;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,20:30:12.71:141,13,0	1/1:2,6:8:5.88:70,6,0	0/0:13,0:1:0.89:0,1,2	0/0:9,0:3:6.37:0,6,36	1/1:17,3:20:20.60:223,21,0	1/1:15,18:33:7.72:56,8,0	1/1:20,2:21:17.68:187,18,0	1/1:16,12:27:4.99:311,5,0	0/0:24,0:24:15.47:0,15,262	1/1:19,1:17:29.93:298,30,0	0/0:6,6:12:0:0,0,0	1/1:26,0:26:24:263,24,0	1/1:19,1:19:9.04:179,9,0	1/1:7,10:16:6.02:70,6,0	0/1:28,1:28:27.48:27,0,295	1/1:10,8:18:6.49:71,6,0	0/1:27,1:28:1.91:2,0,161	0/0:19,0:18:31.49:0,31,287	1/1:20,1:18:7.42:87,7,0	1/1:6,11:15:8.46:68,8,0	1/1:17,29:41:0.47:1,0,0	1/1:20,2:23:23.85:242,24,0	0/1:17,4:20:4.93:161,0,5	1/1:10,22:31:9.03:105,9,0	1/1:7,11:17:8.77:104,9,0	1/1:14,1:12:4.05:195,4,0	1/1:5,13:18:14.53:142,15,0	1/1:8,0:7:5.68:41,6,0
chr10	29940197	.	TCATACACACA	T	1505.47	PASS	AB=0.970;AC=16;AF=0.286;AN=56;BaseQRankSum=9.746;DP=472;FS=3.811;HRun=0;HaplotypeScore=136.5027;InbreedingCoeff=-0.4123;MQ=54.93;MQ0=12;MQRankSum=-6.240;QD=5.21;ReadPosRankSum=-0.909;VQSLOD=2.5168;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:28:17.40:17,0,342	0/1:6,3:9:99:147,0,101	0/0:28,0:18:31.25:0,31,379	0/0:24,0:14:29.20:0,29,335	0/0:9,3:10:8.96:0,9,72	0/1:13,0:13:0.02:0,0,166	0/1:21,0:19:99:190,0,146	0/0:17,0:17:47.73:0,48,389	0/0:11,0:10:23.61:0,24,463	0/0:19,0:19:50.04:0,50,443	0/1:13,0:13:86.18:161,0,86	0/1:17,0:17:99:180,0,149	0/0:8,0:8:17.88:0,18,140	0/1:11,0:11:99:120,0,102	0/0:8,0:8:1.04:0,1,135	0/1:29,0:29:99:198,0,263	0/1:30,0:30:54.40:54,0,299	0/1:11,0:11:17.80:18,0,180	0/0:17,0:16:27.61:0,28,299	0/1:13,0:12:99:122,0,145	0/0:18,0:17:35.61:0,36,273	0/1:12,0:12:68.60:69,0,78	0/0:14,0:14:18.23:0,18,142	0/1:24,0:24:99:122,0,216	0/1:12,0:12:51.02:51,0,181	0/1:19,0:19:21.66:22,0,327	0/1:19,8:27:99:186,0,305	0/0:7,0:6:3.74:0,4,100
chr10	29940200	.	TACACACACAC	T	2551.62	PASS	AB=0.949;AC=39;AF=0.813;AN=48;BaseQRankSum=2.540;DP=470;FS=1.765;HRun=0;HaplotypeScore=131.3046;InbreedingCoeff=0.2996;MQ=54.01;MQ0=13;MQRankSum=-1.036;QD=7.09;ReadPosRankSum=2.568;VQSLOD=2.6139;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:29,1:29:2.35:107,2,0	1/1:8,1:9:6.02:165,6,0	./.	./.	0/1:11,1:10:0:1,0,0	0/1:14,0:14:0:0,0,0	1/1:13,7:18:9.03:259,9,0	0/0:19,0:19:6.56:0,7,21	0/0:11,0:10:10.85:0,11,346	1/1:19,0:19:2.93:29,3,0	1/1:7,6:14:9.03:225,9,0	1/1:10,7:17:8.99:264,9,0	./.	1/1:8,2:10:6.02:176,6,0	1/1:8,0:8:3.01:48,3,0	1/1:18,9:28:12.04:320,12,0	1/1:24,8:32:2.86:88,3,0	1/1:11,0:11:3.01:56,3,0	0/0:18,0:17:0.47:0,0,1	1/1:10,2:11:6.02:176,6,0	1/1:21,0:19:0.47:1,0,0	1/1:6,5:11:5.75:100,6,0	1/1:10,4:15:2.68:11,3,0	1/1:22,1:23:5.86:174,6,0	1/1:12,0:13:6.01:126,6,0	1/1:15,2:17:2.73:88,3,0	0/1:22,2:24:12.80:250,0,13	./.
chr10	29941237	.	A	AACAC	4985.11	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-11.098;DP=711;FS=6.092;HRun=0;HaplotypeScore=112.0600;InbreedingCoeff=0.9977;MQ=71.11;MQ0=1;MQRankSum=-2.447;QD=51.93;ReadPosRankSum=3.070;VQSLOD=6.1887;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:68.69:0,69,1079	0/0:7,0:7:21.07:0,21,341	0/0:26,0:26:42.24:0,42,572	0/0:22,0:18:32.97:0,33,423	0/0:29,0:29:81.03:0,81,1232	0/0:24,0:24:60.11:0,60,877	0/0:26,0:26:69.09:0,69,1048	0/0:56,0:56:99:0,132,1835	0/0:23,0:23:69.21:0,69,1144	0/0:24,0:24:57.14:0,57,819	0/0:18,0:18:48.12:0,48,753	0/0:27,0:27:69.22:0,69,1173	0/0:29,0:29:78.19:0,78,1195	0/0:29,0:29:78.23:0,78,1274	1/1:4,39:42:99:2503,99,0	0/0:27,0:27:72.16:0,72,1089	1/1:5,24:29:63.22:1559,63,0	1/1:4,19:24:37.87:923,38,0	0/0:24,0:24:66.14:0,66,985	0/0:23,0:23:57.17:0,57,937	0/0:25,0:25:72.17:0,72,1165	0/0:18,0:18:48.15:0,48,804	0/0:16,0:16:42.04:0,42,613	0/0:26,0:26:69.37:0,69,1085	0/0:26,0:26:69.21:0,69,1145	0/0:16,0:16:39.12:0,39,653	0/0:33,0:33:87.19:0,87,1393	0/0:10,0:10:24.08:0,24,417
chr10	29941889	.	GAC	G	4354.59	PASS	AB=0.954;AC=44;AF=0.786;AN=56;BaseQRankSum=-2.928;DP=600;FS=2.589;HRun=0;HaplotypeScore=164.5050;InbreedingCoeff=0.0783;MQ=51.06;MQ0=16;MQRankSum=0.912;QD=8.57;ReadPosRankSum=4.177;VQSLOD=4.5894;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:32,0:32:0.72:195,1,0	1/1:12,0:12:14.62:108,15,0	0/0:38,0:12:14.38:0,14,108	0/0:53,0:21:11.87:0,12,93	0/1:23,0:23:17.07:62,0,17	1/1:24,0:23:1.84:228,2,0	0/1:26,0:26:39.05:203,0,39	0/1:34,0:33:18.66:135,0,19	0/1:13,0:17:17.49:77,0,17	1/1:19,0:19:26.52:178,27,0	1/1:17,0:17:32.68:234,33,0	1/1:10,1:11:20.12:150,20,0	1/1:15,0:15:18.51:145,19,0	0/1:12,0:12:9.06:43,0,9	1/1:28,3:31:77.38:596,77,0	1/1:25,0:24:13.65:147,14,0	1/1:20,1:21:19.66:241,20,0	1/1:17,4:21:47.71:367,48,0	0/1:17,0:13:0.96:66,0,1	1/1:13,0:13:11.01:82,11,0	1/1:9,2:11:17.73:121,18,0	1/1:24,0:24:22.20:193,22,0	1/1:22,1:23:0.38:117,0,0	1/1:17,0:16:9.88:89,10,0	1/1:17,0:17:3.83:123,4,0	1/1:21,1:22:40.21:324,40,0	0/1:15,0:15:26.34:74,0,26	0/1:6,1:7:5.84:59,0,6
chr10	29941909	.	CACAGAGAGAGAGAA	C	6017.26	PASS	AB=1.000;AC=34;AF=0.607;AN=56;BaseQRankSum=-7.101;DP=509;FS=13.786;HRun=0;HaplotypeScore=248.7518;InbreedingCoeff=-0.2725;MQ=44.47;MQ0=11;MQRankSum=4.538;QD=13.49;ReadPosRankSum=1.615;VQSLOD=2.0131;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:24:81.42:197,0,81	0/1:9,0:9:59.84:83,0,60	0/0:22,0:6:6.63:0,7,71	0/0:35,0:11:17.22:0,17,117	0/1:17,0:17:87.79:88,0,182	0/1:23,0:22:99:324,0,272	1/1:28,0:27:5.10:421,5,0	0/1:35,0:35:90.83:387,0,91	0/1:13,0:13:99:206,0,146	0/1:13,0:13:84.51:208,0,85	1/1:18,0:18:14.30:225,14,0	1/1:12,0:12:3.54:110,4,0	0/1:14,0:14:99:169,0,181	1/1:6,0:6:6.34:47,6,0	1/1:23,4:27:56.51:812,57,0	0/1:19,0:19:99:140,0,379	1/1:20,0:20:32.56:422,33,0	1/1:16,3:19:34.65:514,35,0	0/1:16,0:13:99:104,0,153	1/1:12,0:12:6.49:187,6,0	1/1:10,0:10:15.43:157,15,0	0/1:20,0:20:54.09:290,0,54	0/1:19,0:18:99:165,0,133	0/1:18,0:17:61.37:106,0,61	0/1:15,0:15:99:177,0,108	0/1:24,0:24:99:313,0,545	0/1:15,0:15:99:166,0,296	0/0:6,0:6:17.85:0,18,595
chr10	29941922	.	A	AGA	6053.80	PASS	AB=1.000;AC=48;AF=0.857;AN=56;BaseQRankSum=-3.338;DP=450;FS=5.019;HRun=0;HaplotypeScore=152.6456;InbreedingCoeff=0.1356;MQ=41.88;MQ0=22;MQRankSum=0.418;QD=13.92;ReadPosRankSum=0.295;VQSLOD=4.4956;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:22:22.67:428,23,0	1/1:8,0:8:17.92:221,18,0	1/1:10,0:2:2.94:18,3,0	0/0:14,0:6:2.86:0,3,15	0/1:12,0:11:3.13:142,0,3	1/1:20,0:19:23.56:317,24,0	0/1:23,0:22:9.15:309,0,9	1/1:31,0:28:24.13:220,24,0	1/1:16,0:16:13.53:306,14,0	1/1:12,0:11:26.98:326,27,0	1/1:15,0:12:21.17:275,21,0	1/1:11,0:10:12.79:136,13,0	1/1:13,0:12:26.82:295,27,0	0/1:4,0:3:10.55:30,0,11	0/1:25,0:25:7.61:68,0,8	1/1:14,0:13:31.64:303,32,0	0/1:18,0:18:1.81:2,0,17	0/1:19,0:18:8.71:46,0,9	1/1:16,0:16:7.44:99,7,0	1/1:6,8:14:18.02:211,18,0	1/1:14,0:12:18:203,18,0	1/1:20,0:20:28.42:273,28,0	1/1:20,0:19:25.29:366,25,0	1/1:16,0:15:18.05:246,18,0	1/1:17,0:17:9.86:285,10,0	1/1:22,0:22:54.15:601,54,0	1/1:13,0:13:19.38:230,19,0	1/1:7,0:7:12.83:98,13,0
chr10	29941923	.	AAG	A	639.51	PASS	AB=0.977;AC=33;AF=0.635;AN=52;BaseQRankSum=0.902;DP=441;FS=0.882;HRun=0;HaplotypeScore=167.3558;InbreedingCoeff=0.2686;MQ=41.94;MQ0=20;MQRankSum=0.219;QD=1.85;ReadPosRankSum=0.174;VQSLOD=2.7736;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:21:1.74:15,2,0	1/1:8,0:8:2.80:26,3,0	./.	0/0:12,0:4:0:0,0,0	1/1:11,1:11:3.17:9,3,0	1/1:20,0:19:4:42,4,0	0/1:23,0:22:5.18:14,0,5	0/1:25,6:28:36.90:184,0,37	0/0:17,0:17:11.54:0,12,153	1/1:10,2:11:8.39:82,8,0	0/0:14,0:11:0.34:0,0,1	0/1:11,0:10:4.44:4,0,5	0/0:13,0:12:2.23:0,2,24	./.	1/1:25,0:25:10.61:54,11,0	1/1:14,0:13:5.92:17,6,0	1/1:18,0:18:2.71:13,3,0	1/1:19,0:18:7.75:35,8,0	0/0:16,0:16:8.01:0,8,53	1/1:13,2:14:4.17:20,4,0	0/1:14,0:12:0:0,0,0	1/1:18,0:18:10.92:49,11,0	0/1:20,0:19:0.45:2,0,0	0/1:16,0:15:1.45:4,0,1	1/1:17,0:17:7.13:55,7,0	1/1:22,0:22:13.23:105,13,0	0/0:12,0:12:5.02:0,5,22	0/1:7,0:7:37.31:44,0,37
chr10	29942624	.	CT	C	2470.77	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.854;DP=684;FS=1.010;HRun=1;HaplotypeScore=68.0151;InbreedingCoeff=0.9971;MQ=80.19;MQ0=0;MQRankSum=-0.686;QD=36.33;ReadPosRankSum=1.824;VQSLOD=3.9852;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,135,2137	0/0:7,0:7:21.07:0,21,336	0/0:16,0:16:48.10:0,48,677	0/0:24,0:24:67.11:0,67,1028	0/0:26,0:26:75.21:0,75,1150	0/0:20,0:20:60.20:0,60,959	0/0:30,0:30:90.31:0,90,1439	0/0:31,0:31:93.31:0,93,1466	0/0:26,0:26:78.25:0,78,1221	0/0:29,0:29:87.27:0,87,1341	0/0:17,0:17:51.17:0,51,815	0/0:28,0:28:84.26:0,84,1291	0/0:25,0:25:75.23:0,75,1169	0/0:29,0:29:87.30:0,87,1391	1/1:0,24:24:66.22:923,66,0	0/0:19,0:19:57.16:0,57,842	1/1:0,24:24:69.23:965,69,0	1/1:1,19:20:53.97:726,54,0	0/0:22,0:22:63.21:0,63,1006	0/0:27,0:27:78.22:0,78,1218	0/0:35,0:35:99:0,105,1673	0/0:31,0:31:93.32:0,93,1486	0/0:28,0:28:84.27:0,84,1320	0/0:22,0:22:66.23:0,66,1052	0/0:22,0:22:66.23:0,66,1054	0/0:20,0:20:60.20:0,60,960	0/0:30,0:29:87.30:0,87,1383	0/0:7,0:7:21.07:0,21,335
chr10	29943058	.	TCTCGATGAGTACCC	T	28347.80	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=12.769;DP=521;FS=1.825;HRun=0;HaplotypeScore=209.4176;InbreedingCoeff=0.9541;MQ=71.00;MQ0=0;MQRankSum=-13.956;QD=72.13;ReadPosRankSum=1.796;VQSLOD=4.4264;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,21:25:42.14:1806,42,0	1/1:2,7:9:21.07:825,21,0	0/0:16,0:16:26.69:0,27,2095	0/0:16,0:16:46.67:0,47,2515	1/1:0,15:15:21:795,21,0	1/1:2,18:20:39.13:1685,39,0	1/1:5,24:29:37.01:1557,37,0	1/1:9,13:22:36.02:970,36,0	0/0:19,0:19:57.20:0,57,3825	1/1:3,16:19:45.15:1825,45,0	1/1:1,8:9:15.05:648,15,0	1/1:3,23:26:54.19:2324,54,0	1/1:1,18:19:45.15:1942,45,0	1/1:6,21:27:42.14:1812,42,0	0/0:17,0:17:48.16:0,48,2542	1/1:4,13:17:27.09:1166,27,0	0/0:32,0:32:93.32:0,93,6334	0/0:28,0:28:84.29:0,84,5351	1/1:3,9:12:27.01:614,27,0	1/1:1,16:17:42.14:1814,42,0	1/1:6,14:20:9.03:389,9,0	1/1:1,9:10:18.06:730,18,0	1/1:2,6:8:12.04:518,12,0	1/1:3,20:23:27.09:1161,27,0	1/1:1,21:22:45.15:1944,45,0	1/1:4,23:27:63.17:2528,63,0	1/1:1,11:11:24.08:1037,24,0	1/1:2,3:5:6.02:259,6,0
chr10	29943252	.	T	TA	3954.50	PASS	AB=0.675;AC=41;AF=0.732;AN=56;BaseQRankSum=-8.236;DP=573;FS=1.701;HRun=14;HaplotypeScore=73.9768;InbreedingCoeff=0.4818;MQ=73.50;MQ0=3;MQRankSum=-1.863;QD=8.67;ReadPosRankSum=-1.016;VQSLOD=2.7424;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,16:26:6.06:165,6,0	0/1:5,2:7:11.84:20,0,12	0/0:36,0:23:16.40:0,16,116	0/0:18,0:12:10.87:0,11,80	1/1:10,5:16:15.71:167,16,0	1/1:8,17:25:32.99:290,33,0	1/1:3,11:15:1.41:114,1,0	1/1:9,13:24:17.59:225,18,0	0/1:6,6:12:10.27:44,0,10	1/1:10,7:18:6.67:144,7,0	1/1:8,15:25:36.57:303,37,0	1/1:5,13:18:24:211,24,0	1/1:6,11:19:14.58:120,15,0	1/1:7,10:17:11.74:91,12,0	0/0:5,0:19:29.60:0,30,96	1/1:6,16:21:26.92:227,27,0	0/0:2,0:24:35.10:0,35,101	0/0:5,0:20:22.37:0,22,65	1/1:6,13:19:32.81:271,33,0	1/1:6,11:17:8.88:172,9,0	1/1:8,16:23:27.42:230,27,0	1/1:11,4:15:17.02:135,17,0	0/1:9,15:25:2.32:206,0,2	1/1:6,12:19:10.37:193,10,0	1/1:7,13:20:6.12:85,6,0	0/1:16,17:34:19.47:254,0,19	1/1:10,12:23:29.93:249,30,0	0/1:8,8:15:10.30:37,0,10
chr10	29943607	.	T	TG	252.54	PASS	AB=0.950;AC=3;AF=0.054;AN=56;BaseQRankSum=1.832;DP=589;FS=1.083;HRun=8;HaplotypeScore=61.9550;InbreedingCoeff=0.7120;MQ=78.88;MQ0=0;MQRankSum=-1.572;QD=7.65;ReadPosRankSum=0.266;VQSLOD=0.7753;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:78.02:0,78,709	0/0:9,0:9:24.01:0,24,220	0/0:23,0:23:36.86:0,37,356	0/0:17,0:17:28.12:0,28,225	0/0:20,0:20:42.01:0,42,384	0/0:18,0:18:48.02:0,48,439	0/0:18,0:19:41.04:0,41,357	0/1:18,1:19:4.64:5,0,209	1/1:1,13:14:30.09:346,30,0	0/0:11,0:11:30.01:0,30,274	0/0:13,0:13:33.01:0,33,302	0/0:21,0:21:57.02:0,57,522	0/0:20,0:20:48.01:0,48,439	0/0:21,0:21:57.02:0,57,521	0/0:20,0:20:51.02:0,51,467	0/0:19,0:19:45.02:0,45,412	0/0:31,0:31:87.01:0,87,788	0/0:18,0:19:56.07:0,56,500	0/0:29,1:30:34.39:0,34,566	0/0:25,0:25:54.46:0,54,490	0/0:24,0:24:60.03:0,60,549	0/0:26,0:26:60.01:0,60,548	0/0:22,0:22:56.93:0,57,495	0/0:39,0:39:90.04:0,90,823	0/0:27,0:27:66:0,66,597	0/0:12,0:12:33.01:0,33,302	0/0:19,0:19:48.02:0,48,439	0/0:21,0:20:57.01:0,57,516
chr10	29944452	.	T	TAA	2710.37	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=1.891;DP=669;FS=0.468;HRun=10;HaplotypeScore=87.4650;InbreedingCoeff=0.9592;MQ=69.08;MQ0=0;MQRankSum=-0.546;QD=31.89;ReadPosRankSum=3.263;VQSLOD=4.1089;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,111,1113	0/0:13,0:13:33.04:0,33,327	0/0:12,0:13:6.41:0,6,140	0/0:8,0:9:21:0,21,201	0/0:30,0:30:78.15:0,78,793	0/0:23,0:23:63.13:0,63,634	0/0:20,0:20:48.07:0,48,488	0/0:37,0:37:81.08:0,81,802	0/0:20,0:21:50.85:0,51,571	0/0:37,0:37:93.17:0,93,941	0/0:22,0:23:35.72:0,36,403	0/0:24,0:24:54.08:0,54,542	0/0:29,0:29:69.25:0,69,714	0/0:25,0:25:57.03:0,57,566	1/1:4,25:28:69.23:1030,69,0	0/0:16,0:15:36.03:0,36,366	1/1:2,27:30:74.74:1082,75,0	1/1:5,20:26:51.16:741,51,0	0/0:17,0:17:45.03:0,45,444	0/0:22,0:22:57.04:0,57,570	0/0:16,0:16:42.07:0,42,427	0/0:22,0:23:47.83:0,48,540	0/0:31,0:31:75.10:0,75,743	0/0:27,0:27:66.10:0,66,665	0/0:31,0:31:75.04:0,75,749	0/0:27,0:27:66.02:0,66,644	0/0:26,0:27:65.81:0,66,645	0/0:5,0:5:15.03:0,15,152
chr10	29945557	.	GCTCAGTACTCACTGGGCTCAGCACTGACTAGA	G	7627.44	PASS	AB=0.756;AC=43;AF=0.768;AN=56;BaseQRankSum=0.566;DP=578;FS=9.110;HRun=0;HaplotypeScore=452.4291;InbreedingCoeff=0.7364;MQ=71.09;MQ0=0;MQRankSum=1.036;QD=16.84;ReadPosRankSum=3.587;VQSLOD=1.0336;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:38,0:38:62.88:833,63,0	1/1:5,0:5:9:151,9,0	0/0:21,0:18:7.54:0,8,120	0/0:25,0:24:6.04:0,6,216	1/1:1,11:12:14.81:132,15,0	1/1:23,0:23:45.02:538,45,0	1/1:22,0:22:38.97:333,39,0	1/1:25,0:25:27.02:247,27,0	0/1:21,0:21:35.92:36,0,1012	1/1:6,19:25:50.24:626,50,0	1/1:7,3:10:17.76:168,18,0	1/1:20,0:20:39.01:485,39,0	1/1:14,0:14:27.03:408,27,0	1/1:22,0:22:38.99:393,39,0	0/0:30,0:30:66.08:0,66,1881	1/1:22,0:22:29.99:259,30,0	0/0:34,0:34:84.08:0,84,2513	0/0:15,0:15:24:0,24,640	1/1:10,6:15:18:242,18,0	1/1:6,0:6:8.99:98,9,0	1/1:47,0:47:80.78:893,81,0	0/1:10,15:25:0:0,0,0	0/1:4,5:9:0.18:0,0,0	1/1:26,0:26:44.98:549,45,0	1/1:5,0:5:3.01:100,3,0	1/1:7,11:18:32.99:301,33,0	1/1:24,0:23:56.76:666,57,0	1/1:18,0:18:20.96:171,21,0
chr10	29946141	.	TACATACACACACACACACACACAC	T	1439.69	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=4.933;DP=539;FS=0.000;HRun=0;HaplotypeScore=271.9204;InbreedingCoeff=0.6678;MQ=60.65;MQ0=15;MQRankSum=-4.226;QD=33.48;ReadPosRankSum=0.688;VQSLOD=2.3001;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:27:48.03:0,48,2177	0/0:4,0:4:12.03:0,12,1010	0/0:21,0:12:21.67:0,22,398	0/0:30,0:16:31.35:0,31,398	0/0:9,0:8:18:0,18,564	0/0:15,0:15:38.98:0,39,1448	0/0:16,0:16:37.25:0,37,1148	0/0:19,0:16:45.07:0,45,978	0/0:24,0:25:63.09:0,63,3222	0/0:20,0:18:49.31:0,49,2224	0/0:13,0:13:30.06:0,30,2290	0/0:29,0:29:57.12:0,57,3333	0/0:24,0:24:56.51:0,57,2959	0/0:16,0:14:24.07:0,24,1951	1/1:2,15:19:21.07:1330,21,0	0/0:29,0:28:63.11:0,63,3647	1/1:0,0:11:3.01:136,3,0	0/1:13,0:12:90.07:90,0,201	0/0:15,0:15:32.76:0,33,2145	0/0:21,0:21:48.10:0,48,3394	0/0:31,0:30:57.93:0,58,2876	0/0:12,0:12:24.03:0,24,1133	0/0:18,0:18:37.66:0,38,2997	0/0:28,0:27:54.08:0,54,3276	0/0:21,0:22:57.09:0,57,3361	0/0:23,0:23:65.99:0,66,4069	0/0:18,0:18:51.03:0,51,2775	0/0:8,0:8:17.96:0,18,1051
chr10	29946145	.	T	TAC	2145.66	PASS	AB=0.888;AC=32;AF=0.615;AN=52;BaseQRankSum=-3.293;DP=598;FS=0.723;HRun=0;HaplotypeScore=95.7742;InbreedingCoeff=-0.1153;MQ=58.06;MQ0=17;MQRankSum=2.225;QD=4.47;ReadPosRankSum=-2.719;VQSLOD=2.2501;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:23,7:28:3.01:44,3,0	1/1:3,0:4:8.88:85,9,0	./.	./.	0/1:10,0:9:10.23:10,0,45	1/1:20,0:20:5.82:65,6,0	0/1:15,0:15:25.90:38,0,26	1/1:20,0:17:2.74:13,3,0	0/0:16,0:26:19.87:0,20,104	1/1:16,7:23:9.95:112,10,0	0/1:9,5:15:12.28:98,0,12	0/1:23,7:31:47.66:76,0,48	1/1:24,2:26:23.10:231,23,0	1/1:9,8:17:6.01:88,6,0	0/0:17,0:17:19.89:0,20,97	0/1:19,10:30:13.47:164,0,13	0/0:11,0:11:2.84:0,3,14	0/0:13,0:12:2.74:0,3,12	0/1:14,0:13:16.90:17,0,24	0/1:26,0:26:63.32:107,0,63	0/1:29,6:36:25.97:38,0,26	1/1:7,7:15:6.02:88,6,0	0/1:16,1:17:14.14:137,0,14	1/1:18,8:28:6.71:218,7,0	0/1:26,5:31:3.20:272,0,3	0/1:23,8:31:47.63:123,0,48	0/1:27,0:27:54.03:147,0,54	1/1:4,3:7:9.03:132,9,0
chr10	29946271	.	GGTGT	G	12383.52	PASS	AB=0.600;AC=45;AF=0.804;AN=56;BaseQRankSum=-3.548;DP=574;FS=13.370;HRun=0;HaplotypeScore=114.6631;InbreedingCoeff=0.7682;MQ=69.90;MQ0=4;MQRankSum=1.063;QD=26.07;ReadPosRankSum=4.053;VQSLOD=4.1192;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,24:33:45.15:740,45,0	1/1:0,14:14:27.09:443,27,0	0/0:23,0:15:15.05:0,15,281	0/0:30,0:21:27.01:0,27,406	1/1:11,16:29:39.12:598,39,0	1/1:6,15:22:36.12:570,36,0	1/1:7,11:19:24.04:345,24,0	1/1:9,8:16:1.12:319,1,0	1/1:4,16:19:33.11:543,33,0	1/1:8,11:20:34.30:494,34,0	0/1:3,6:9:12.49:90,0,12	1/1:5,24:29:60.20:986,60,0	1/1:7,16:23:38.46:636,38,0	1/1:4,10:14:12.47:423,12,0	0/0:17,0:17:2.98:0,3,25	1/1:9,17:28:42.13:648,42,0	0/0:16,0:16:14.92:0,15,113	0/0:13,0:13:15:0,15,250	1/1:6,9:14:24.08:383,24,0	1/1:2,13:16:27.08:422,27,0	1/1:7,14:21:30.10:493,30,0	1/1:7,19:26:50.20:795,50,0	1/1:6,17:25:42.07:648,42,0	1/1:6,17:23:45.15:718,45,0	1/1:3,12:15:30.10:493,30,0	1/1:5,17:24:57:802,57,0	1/1:1,18:21:45.14:697,45,0	1/1:6,4:10:6.02:99,6,0
chr10	29948070	.	G	GTAA	2874.30	PASS	AB=0.667;AC=43;AF=0.935;AN=46;BaseQRankSum=-1.673;DP=216;FS=7.027;HRun=0;HaplotypeScore=27.6853;InbreedingCoeff=0.0652;MQ=68.56;MQ0=0;MQRankSum=1.345;QD=14.52;ReadPosRankSum=0.459;VQSLOD=1.4175;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,4:12:3.01:58,3,0	1/1:5,3:8:6.02:116,6,0	./.	./.	1/1:3,1:4:3.01:58,3,0	1/1:2,6:8:18.06:347,18,0	0/0:1,0:1:3.01:0,3,40	1/1:37,0:37:24.05:274,24,0	1/1:6,0:8:6.02:78,6,0	1/1:4,2:6:6.02:116,6,0	1/1:5,1:6:3.01:58,3,0	1/1:3,4:8:9.03:162,9,0	1/1:2,2:4:3.01:58,3,0	1/1:4,6:11:12.04:231,12,0	./.	0/1:4,4:8:33.82:52,0,34	1/1:16,0:16:15.02:212,15,0	1/1:12,0:12:2.36:38,2,0	1/1:5,4:9:12.04:231,12,0	1/1:1,3:4:9.03:143,9,0	1/1:1,4:5:3.01:58,3,0	./.	1/1:2,2:4:6.02:116,6,0	./.	1/1:3,6:9:15.05:289,15,0	1/1:2,2:4:6.02:116,6,0	1/1:8,0:8:6.02:115,6,0	1/1:7,0:7:3.01:48,3,0
chr10	29949288	.	T	TA	12834.99	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-14.730;DP=562;FS=8.093;HRun=8;HaplotypeScore=64.5715;InbreedingCoeff=0.9959;MQ=83.12;MQ0=0;MQRankSum=-2.062;QD=29.10;ReadPosRankSum=0.185;VQSLOD=4.8984;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,23:29:60.18:692,60,0	1/1:1,8:9:24.07:277,24,0	0/0:16,0:16:29.02:0,29,247	0/0:16,0:16:24.72:0,25,257	1/1:1,26:28:75.06:846,75,0	1/1:4,24:28:47.76:802,48,0	1/1:0,18:18:51.15:589,51,0	1/1:5,31:36:90.23:1008,90,0	0/0:21,0:21:60.01:0,60,544	1/1:2,19:21:54.27:653,54,0	1/1:2,16:18:45.13:519,45,0	1/1:1,13:14:36.11:415,36,0	1/1:1,16:17:20.68:492,21,0	1/1:2,16:18:48.14:554,48,0	0/0:18,0:18:53.07:0,53,472	1/1:3,16:19:17.67:457,18,0	0/0:31,0:31:84.01:0,84,759	0/0:19,0:19:50.70:0,51,450	1/1:5,12:17:39.12:450,39,0	1/1:1,28:29:84.21:955,84,0	1/1:1,9:10:24.07:277,24,0	1/1:2,23:25:60.09:675,60,0	1/1:0,17:17:48.14:554,48,0	1/1:1,16:17:45.13:519,45,0	1/1:0,18:18:51.15:589,51,0	1/1:7,14:21:42.10:473,42,0	1/1:1,20:21:57.17:658,57,0	1/1:0,11:11:33.10:381,33,0
chr10	29949470	.	A	AT	1886.81	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=11.632;DP=658;FS=1.099;HRun=7;HaplotypeScore=70.5527;InbreedingCoeff=0.9994;MQ=83.58;MQ0=0;MQRankSum=0.397;QD=28.59;ReadPosRankSum=2.052;VQSLOD=4.3229;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,120,1138	0/0:14,0:14:33:0,33,309	0/0:19,0:19:39.01:0,39,361	0/0:20,0:20:36:0,36,334	0/0:29,0:29:81.13:0,81,782	0/0:26,0:25:66.08:0,66,631	0/0:20,0:20:57.07:0,57,544	0/0:26,0:26:60.09:0,60,579	0/0:27,0:27:76.68:0,77,728	0/0:24,0:24:63.10:0,63,608	0/0:17,0:17:48.08:0,48,464	0/0:31,0:31:90.12:0,90,857	0/0:26,0:26:75.11:0,75,720	0/0:29,0:29:84.11:0,84,799	1/1:2,23:25:57.17:689,57,0	0/0:22,0:22:60.08:0,60,570	1/1:1,25:26:69.21:834,69,0	1/1:1,14:15:42.13:507,42,0	0/0:15,0:15:45.07:0,45,435	0/0:31,0:31:84.08:0,84,801	0/0:16,0:16:45.07:0,45,435	0/0:22,0:22:60.07:0,60,574	0/0:26,0:26:75.09:0,75,713	0/0:29,0:29:78.03:0,78,733	0/0:23,0:23:63.09:0,63,608	0/0:21,0:21:57.09:0,57,550	0/0:26,0:26:72.10:0,72,689	0/0:9,0:9:27.03:0,27,255
chr10	29951279	.	CA	C	2233.08	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=5.451;DP=604;FS=7.119;HRun=4;HaplotypeScore=86.3067;InbreedingCoeff=0.9678;MQ=92.81;MQ0=0;MQRankSum=-3.440;QD=28.63;ReadPosRankSum=1.929;VQSLOD=3.3752;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,120,1680	0/0:8,0:8:24.08:0,24,336	0/0:27,0:27:66.35:0,66,1009	0/0:27,0:27:75.22:0,75,991	0/0:26,0:26:78.22:0,78,1069	0/0:18,0:18:51.17:0,51,714	0/0:22,0:22:63.20:0,63,864	0/0:32,0:32:93.30:0,93,1271	0/0:15,1:16:12.18:0,12,593	0/0:20,0:20:57.19:0,57,798	0/0:19,0:19:54.17:0,54,736	0/0:28,0:28:84.28:0,84,1176	0/0:22,0:22:66.20:0,66,903	0/0:17,0:17:45.14:0,45,611	1/1:1,25:26:66.20:792,66,0	0/0:29,0:29:87.29:0,87,1217	1/1:1,23:24:60.18:720,60,0	1/1:1,27:28:72.22:864,72,0	0/0:26,0:26:69.22:0,69,947	0/0:20,0:20:60.19:0,60,823	0/0:19,0:19:54.14:0,54,718	0/0:16,0:16:48.16:0,48,672	0/0:8,0:8:24.08:0,24,336	0/0:16,0:16:48.15:0,48,655	0/0:10,0:10:30.10:0,30,420	0/0:19,0:19:57.19:0,57,790	0/0:35,0:35:99:0,102,1427	0/0:3,0:3:9.03:0,9,126
chr10	29952907	.	T	TA	4590.27	PASS	AB=0.726;AC=35;AF=0.625;AN=56;BaseQRankSum=-3.831;DP=640;FS=1.400;HRun=14;HaplotypeScore=79.2299;InbreedingCoeff=0.0439;MQ=75.50;MQ0=2;MQRankSum=0.096;QD=8.42;ReadPosRankSum=-0.547;VQSLOD=4.0252;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:11,23:36:13.95:272,0,14	1/1:3,9:12:9:193,9,0	0/1:35,0:22:5.30:5,0,48	0/1:14,0:8:11.41:31,0,11	0/1:13,10:23:41.25:158,0,41	1/1:4,16:20:13.63:234,14,0	1/1:4,17:21:16.73:271,17,0	1/1:10,17:28:12.32:331,12,0	0/0:29,0:32:52.57:0,53,389	1/1:13,11:24:10.69:206,11,0	1/1:6,17:24:4:243,4,0	0/1:10,2:11:4.79:70,0,5	0/1:11,11:22:30.15:108,0,30	1/1:6,17:23:13.63:234,14,0	0/0:17,0:19:30.44:0,30,184	0/1:8,15:23:22.01:198,0,22	0/0:25,0:27:39.97:0,40,245	0/0:14,0:17:28.47:0,28,175	0/1:14,7:23:24.51:171,0,25	1/1:5,14:19:33.74:268,34,0	0/1:10,6:17:3.94:79,0,4	1/1:6,16:24:13.23:195,13,0	0/1:10,17:27:0.85:354,0,1	1/1:6,13:19:23.76:189,24,0	0/1:9,10:20:30.89:115,0,31	1/1:12,21:33:3.34:351,3,0	0/1:11,23:35:12.94:260,0,13	0/1:5,3:10:11.13:53,0,11
chr10	29953394	.	GT	G	2101.95	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=11.783;DP=480;FS=3.836;HRun=2;HaplotypeScore=57.2095;InbreedingCoeff=0.9842;MQ=85.09;MQ0=0;MQRankSum=-0.524;QD=32.84;ReadPosRankSum=1.154;VQSLOD=3.5296;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:93.25:0,93,1338	0/0:5,0:5:15.04:0,15,205	0/0:14,0:14:39.09:0,39,509	0/0:18,0:18:16.79:0,17,542	0/0:12,0:12:36.11:0,36,519	0/0:12,0:12:36.12:0,36,539	0/0:22,0:22:63.13:0,63,861	0/0:15,0:15:45.15:0,45,658	0/0:12,0:12:36.12:0,36,539	0/0:14,0:14:42.14:0,42,610	0/0:5,0:5:15.04:0,15,205	0/0:15,0:15:33.04:0,33,617	0/0:20,0:20:60.20:0,60,898	0/0:18,0:18:54.18:0,54,807	1/1:2,20:22:57.18:740,57,0	0/0:28,0:28:84.25:0,84,1201	1/1:0,24:24:72.22:921,72,0	1/1:0,18:18:45.15:584,45,0	0/0:18,0:18:54.18:0,54,809	0/0:13,0:13:36.12:0,36,534	0/0:42,0:42:99:0,114,1688	0/0:14,0:14:42.13:0,42,608	0/0:13,0:13:33.10:0,33,474	0/0:24,0:24:72.24:0,72,1078	0/0:13,0:13:39.13:0,39,579	0/0:9,0:9:27.09:0,27,404	0/0:14,0:14:39.13:0,39,583	0/0:15,0:15:45.14:0,45,654
chr10	29953471	.	CA	C	2994.20	PASS	AB=0.889;AC=51;AF=0.911;AN=56;BaseQRankSum=-3.071;DP=248;FS=0.966;HRun=1;HaplotypeScore=47.6512;InbreedingCoeff=0.3374;MQ=78.65;MQ0=0;MQRankSum=-4.173;QD=13.37;ReadPosRankSum=-1.414;VQSLOD=1.9318;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,1:10:10.77:78,11,0	1/1:3,0:3:5.96:51,6,0	0/1:7,1:7:25.71:26,0,40	0/0:18,1:19:22.93:0,23,445	1/1:7,1:8:5.75:51,6,0	1/1:5,0:5:8.03:57,8,0	1/1:18,6:24:35.84:284,36,0	1/1:3,0:3:2.99:24,3,0	1/1:6,4:10:14.90:113,15,0	1/1:1,0:1:3:28,3,0	1/1:6,2:8:8.09:121,8,0	1/1:12,0:12:21.97:160,22,0	1/1:8,1:9:9.86:75,10,0	1/1:8,0:8:20.62:160,21,0	1/1:5,8:13:32.93:274,33,0	1/1:11,0:11:15.48:114,15,0	1/1:12,3:14:34.32:277,34,0	1/1:10,5:15:38.91:337,39,0	1/1:7,1:8:17.79:131,18,0	1/1:5,0:5:11.98:99,12,0	1/1:14,1:15:32.96:281,33,0	1/1:5,1:6:11.75:78,12,0	0/0:0,5:5:0:0,0,1	1/1:6,0:6:6.85:48,7,0	1/1:4,0:4:7.20:47,7,0	1/1:3,0:3:6.89:34,7,0	1/1:10,1:11:15.68:114,16,0	1/1:3,0:3:5.99:49,6,0
chr10	29953476	.	CCCA	C	1023.17	PASS	AB=1.000;AC=30;AF=0.536;AN=56;BaseQRankSum=-0.569;DP=227;FS=59.052;HRun=0;HaplotypeScore=52.7251;InbreedingCoeff=-0.1384;MQ=83.46;MQ0=0;MQRankSum=-2.552;QD=5.36;ReadPosRankSum=1.090;VQSLOD=-0.2300;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:8:1.99:0,2,34	0/1:5,0:5:18.43:18,0,19	0/1:10,0:9:51.47:51,0,198	0/0:16,0:16:48.16:0,48,881	1/1:8,0:8:5.82:49,6,0	0/0:5,0:5:12.02:0,12,132	0/1:25,0:25:43.33:43,0,168	1/1:7,0:7:8.99:73,9,0	1/1:8,0:8:2.83:24,3,0	0/0:3,0:3:0:0,0,0	0/1:6,0:6:14.67:15,0,81	0/1:14,0:14:78.43:78,0,109	0/1:9,0:9:17.75:18,0,41	0/1:5,0:5:13.74:14,0,74	1/1:2,7:9:21.02:206,21,0	0/1:13,0:13:56.89:57,0,114	1/1:5,2:7:11.96:100,12,0	1/1:5,4:9:19.06:187,19,0	0/1:9,0:9:24.68:47,0,25	0/0:2,0:2:3:0,3,26	0/1:12,0:12:55.04:55,0,83	1/1:5,0:5:3.23:21,3,0	0/1:4,0:4:0:0,0,0	0/1:5,0:5:14.01:14,0,40	0/1:6,0:6:17.53:18,0,42	0/0:2,0:2:3.01:0,3,40	0/1:11,0:11:23.44:23,0,169	1/1:4,0:4:8.97:70,9,0
chr10	29953477	.	CCA	C	1397.13	PASS	AB=0.991;AC=36;AF=0.667;AN=54;BaseQRankSum=-2.039;DP=230;FS=46.891;HRun=0;HaplotypeScore=48.2093;InbreedingCoeff=-0.0786;MQ=86.48;MQ0=0;MQRankSum=-2.515;QD=6.85;ReadPosRankSum=0.196;VQSLOD=0.6813;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:7,1:8:14.56:17,0,15	1/1:5,0:5:6.76:51,7,0	0/1:12,0:11:73.06:73,0,161	0/0:16,0:16:41.27:0,41,629	1/1:7,0:7:5.99:50,6,0	0/0:5,0:5:5.94:0,6,41	0/1:23,0:23:37.63:112,0,38	1/1:8,0:8:9.46:74,9,0	1/1:4,4:8:3.32:25,3,0	./.	0/1:6,0:6:19:21,0,19	0/1:15,0:15:35.10:87,0,35	0/1:8,0:8:17.05:38,0,17	0/1:6,0:6:11.45:43,0,11	1/1:9,0:9:21:189,21,0	0/1:12,0:12:49.63:84,0,50	1/1:8,0:8:15.84:120,16,0	1/1:8,1:9:20.82:195,21,0	1/1:9,0:9:11.25:57,11,0	1/1:3,0:3:2.89:26,3,0	1/1:10,0:10:8.48:75,8,0	1/1:6,0:6:6.44:48,6,0	0/1:4,0:4:0:0,0,0	0/1:5,0:5:14.02:14,0,20	0/1:6,0:6:17.23:17,0,22	0/0:2,0:2:3:0,3,25	0/1:13,0:13:51.03:70,0,51	1/1:4,0:4:8.98:71,9,0
chr10	29953478	.	CA	C	1813.90	PASS	AB=0.765;AC=45;AF=0.900;AN=50;BaseQRankSum=-3.838;DP=280;FS=10.292;HRun=2;HaplotypeScore=74.6393;InbreedingCoeff=0.2833;MQ=85.57;MQ0=0;MQRankSum=-4.605;QD=7.40;ReadPosRankSum=-1.214;VQSLOD=-0.4375;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:14:5.28:45,5,0	1/1:6,0:6:5.94:47,6,0	0/1:9,4:12:73.94:74,0,110	0/0:16,1:17:50.52:0,51,510	1/1:11,0:11:5.75:49,6,0	./.	1/1:15,3:19:15.01:117,15,0	1/1:0,7:7:11.99:100,12,0	1/1:9,0:9:5.99:50,6,0	./.	1/1:7,0:7:3:27,3,0	1/1:15,0:15:14.62:139,15,0	1/1:8,0:8:11.26:89,11,0	1/1:8,0:8:6:51,6,0	1/1:11,0:11:20.90:159,21,0	1/1:15,0:15:15.43:136,15,0	1/1:12,0:13:17.90:137,18,0	1/1:15,0:15:20.97:178,21,0	1/1:11,0:11:17.20:137,17,0	1/1:5,0:5:3:26,3,0	1/1:13,0:13:9:77,9,0	1/1:12,0:12:6.44:48,6,0	0/0:1,1:2:0:0,0,0	1/1:8,0:8:2.97:20,3,0	1/1:7,0:7:5.98:48,6,0	./.	1/1:11,0:11:11.75:101,12,0	1/1:7,0:7:8.98:71,9,0
chr10	29954388	.	G	GTTTTT	7953.14	PASS	AB=0.733;AC=51;AF=0.911;AN=56;BaseQRankSum=-3.724;DP=623;FS=0.000;HRun=15;HaplotypeScore=143.1969;InbreedingCoeff=0.6020;MQ=67.43;MQ0=2;MQRankSum=-4.425;QD=13.81;ReadPosRankSum=-0.731;VQSLOD=1.6730;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,0:23:11.86:125,12,0	1/1:4,1:11:12:196,12,0	0/0:29,0:19:18.55:0,19,189	0/0:18,0:11:4.86:0,5,67	1/1:19,0:37:44.69:643,45,0	1/1:4,0:24:26.25:324,26,0	1/1:8,1:17:12.04:226,12,0	1/1:25,0:42:51.60:520,52,0	1/1:5,0:18:23.28:212,23,0	1/1:11,0:29:50.88:599,51,0	1/1:10,0:21:17.02:231,17,0	1/1:13,0:15:15:191,15,0	1/1:19,0:21:23.16:408,23,0	1/1:4,0:10:3.01:64,3,0	1/1:7,0:21:17.42:163,17,0	1/1:9,0:16:11.83:163,12,0	1/1:5,0:21:25.42:194,25,0	1/1:19,0:24:43.54:426,44,0	1/1:13,0:24:38.22:476,38,0	1/1:14,0:39:8.53:655,9,0	1/1:6,0:6:1.82:6,2,0	1/1:4,2:14:23.92:323,24,0	1/1:15,1:36:37.04:530,37,0	0/1:7,0:11:2.69:46,0,3	1/1:13,0:25:23.23:299,23,0	1/1:9,0:24:41.24:522,41,0	1/1:13,0:27:19.15:270,19,0	1/1:4,0:15:14.93:141,15,0
chr10	29957984	.	C	CA	5631.44	PASS	AB=0.713;AC=48;AF=0.857;AN=56;BaseQRankSum=-4.437;DP=598;FS=6.872;HRun=13;HaplotypeScore=84.5810;InbreedingCoeff=0.1649;MQ=75.85;MQ0=5;MQRankSum=-0.016;QD=9.95;ReadPosRankSum=-0.578;VQSLOD=3.9765;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,26:30:35.80:309,36,0	1/1:4,0:4:3:28,3,0	0/0:32,0:12:9.42:0,9,49	0/1:30,1:21:1.40:1,0,49	1/1:8,21:30:40.86:487,41,0	1/1:2,16:19:35.75:308,36,0	1/1:1,12:13:24.02:218,24,0	0/1:10,18:29:4.93:350,0,5	0/1:16,1:17:15.28:15,0,73	1/1:9,21:30:16.30:457,16,0	1/1:4,14:19:35.84:309,36,0	0/1:4,13:19:17.39:116,0,17	0/1:10,10:20:5.57:97,0,6	1/1:5,18:23:0.28:132,0,0	1/1:5,0:25:22.73:115,23,0	1/1:4,15:19:27.03:250,27,0	1/1:11,1:26:28:147,28,0	1/1:6,0:22:14.58:75,15,0	1/1:7,9:17:6.19:177,6,0	1/1:5,10:15:22.16:269,22,0	1/1:3,9:12:14.97:131,15,0	1/1:4,7:11:17.94:155,18,0	1/1:2,2:18:30.55:189,31,0	1/1:4,14:18:6.42:196,6,0	1/1:4,24:30:26.21:393,26,0	1/1:8,20:27:36.42:458,36,0	0/1:3,21:24:5.93:97,0,6	1/1:5,7:12:17.86:154,18,0
chr10	29957999	.	C	CA	280.51	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=2.176;DP=634;FS=11.739;HRun=7;HaplotypeScore=87.0737;InbreedingCoeff=0.5580;MQ=69.35;MQ0=6;MQRankSum=-0.461;QD=5.19;ReadPosRankSum=0.805;VQSLOD=0.0560;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:60.77:0,61,454	0/0:2,0:2:5.60:0,6,39	0/1:37,0:11:6.32:6,0,88	0/0:30,0:18:19.47:0,19,263	0/0:30,0:30:78.58:0,79,576	0/0:17,0:17:16.41:0,16,167	0/0:18,0:18:38.46:0,38,305	0/0:29,0:29:53.97:0,54,429	1/1:1,15:17:32.99:374,33,0	0/0:41,0:40:96.60:0,97,841	0/0:21,0:21:56.65:0,57,422	0/0:18,0:18:26.59:0,27,194	0/0:15,0:15:23.13:0,23,184	0/0:29,0:28:43.41:0,43,393	0/0:24,0:23:38.62:0,39,345	0/0:17,0:17:28.07:0,28,288	0/0:27,0:26:27.70:0,28,216	0/0:23,0:23:22.03:0,22,242	0/0:23,0:23:29.36:0,29,376	0/0:19,0:19:50.43:0,50,404	0/0:13,0:13:8.55:0,9,124	0/0:13,0:13:30.85:0,31,269	0/0:22,0:22:47.26:0,47,392	0/0:19,0:19:26.93:0,27,219	0/0:37,0:37:62.79:0,63,534	0/0:26,0:25:51.04:0,51,494	0/0:24,0:24:29.25:0,29,230	0/0:8,0:7:5.68:0,6,84
chr10	29959170	.	C	CT	1812.59	PASS	AB=0.882;AC=7;AF=0.125;AN=56;BaseQRankSum=-7.750;DP=522;FS=4.637;HRun=10;HaplotypeScore=58.4515;InbreedingCoeff=0.8116;MQ=80.72;MQ0=0;MQRankSum=0.007;QD=18.31;ReadPosRankSum=3.863;VQSLOD=4.5081;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:56.38:0,56,467	0/0:16,0:16:21.29:0,21,300	0/0:20,0:21:8.73:0,9,146	0/0:14,0:14:17.96:0,18,146	0/0:17,0:17:38.93:0,39,320	0/0:16,0:16:26.91:0,27,221	0/0:25,0:25:59.88:0,60,492	0/0:21,0:21:50.91:0,51,419	0/0:17,0:17:32.94:0,33,271	0/0:17,0:17:41.93:0,42,345	0/0:10,0:10:29.96:0,30,246	0/0:19,0:19:41.91:0,42,345	0/0:21,0:21:41.87:0,42,344	0/0:12,0:12:32.96:0,33,271	1/1:2,21:23:45.58:481,46,0	0/0:15,0:15:32.90:0,33,266	1/1:3,27:32:74.86:764,75,0	1/1:3,26:29:44.53:679,45,0	0/0:19,2:21:15.92:0,16,337	0/0:13,0:13:29.93:0,30,243	0/0:17,0:17:29.83:0,30,235	0/0:15,0:15:29.89:0,30,241	0/1:13,2:15:37.05:37,0,145	0/0:13,0:13:26.94:0,27,222	0/0:15,0:15:32.92:0,33,271	0/0:17,0:17:44.94:0,45,370	0/0:27,0:27:40.87:0,41,487	0/0:9,0:10:26.01:0,26,203
chr10	29959649	.	G	GA	11922.77	PASS	AB=0.583;AC=49;AF=0.875;AN=56;BaseQRankSum=-7.955;DP=654;FS=1.957;HRun=10;HaplotypeScore=67.2086;InbreedingCoeff=0.4280;MQ=80.37;MQ0=0;MQRankSum=-1.945;QD=19.58;ReadPosRankSum=0.504;VQSLOD=5.6670;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:12,27:39:23.35:648,23,0	1/1:0,6:7:20.89:206,21,0	0/0:20,0:18:3.78:0,4,154	0/0:23,0:22:17.48:0,17,146	1/1:10,24:34:19.91:622,20,0	0/1:6,17:24:4.33:353,0,4	1/1:7,19:28:26.18:452,26,0	1/1:5,23:28:65.44:642,65,0	1/1:6,20:26:20.47:423,20,0	1/1:4,16:20:30.61:497,31,0	1/1:6,17:24:56.09:533,56,0	1/1:4,15:21:38.09:424,38,0	1/1:5,14:20:17.33:374,17,0	1/1:6,23:29:35.38:567,35,0	1/1:4,13:17:11.45:327,11,0	1/1:5,17:22:4.76:463,5,0	0/1:8,17:26:1.99:427,0,2	0/1:6,18:24:1.16:400,0,1	1/1:2,17:19:51.13:544,51,0	1/1:2,13:15:26.12:277,26,0	1/1:2,13:15:27.07:288,27,0	1/1:7,21:28:60.11:627,60,0	1/1:5,14:21:11.12:292,11,0	1/1:5,20:25:4.85:463,5,0	1/1:9,15:24:51.59:537,52,0	1/1:8,20:29:41.33:614,41,0	1/1:5,24:29:4.27:662,4,0	1/1:5,10:15:5.43:263,5,0
chr10	29961026	.	CGTGTAGACAGAA	C	55.76	PASS	AB=0.840;AC=3;AF=0.054;AN=56;BaseQRankSum=3.210;DP=424;FS=16.327;HRun=0;HaplotypeScore=129.4937;InbreedingCoeff=-0.0750;MQ=81.19;MQ0=5;MQRankSum=0.626;QD=1.36;ReadPosRankSum=-4.048;VQSLOD=0.2909;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:21:46.62:0,47,2107	0/0:1,0:1:3.01:0,3,109	0/0:38,0:19:48.51:0,49,2080	0/0:42,0:23:41.59:0,42,1814	0/0:11,0:11:33.11:0,33,1698	0/0:5,0:4:12.04:0,12,523	0/0:24,0:24:72.25:0,72,3470	0/0:18,0:18:54.19:0,54,2894	0/0:7,0:7:14.26:0,14,577	0/1:11,7:18:62.03:62,0,1458	0/0:5,0:5:11.77:0,12,512	0/0:22,0:22:66.23:0,66,3053	0/0:11,0:10:30.10:0,30,1423	0/0:10,0:10:30.10:0,30,1364	0/0:21,0:21:21.07:0,21,866	0/0:10,0:10:27.08:0,27,1134	0/0:25,0:25:33.11:0,33,1514	0/0:11,0:11:24.08:0,24,1117	0/0:13,0:13:39.13:0,39,1962	0/0:9,4:13:27.09:0,27,1216	0/0:32,0:32:82.85:0,83,3710	0/0:8,0:8:18.05:0,18,717	0/0:5,4:9:15.05:0,15,655	0/0:17,0:17:28.90:0,29,1403	0/1:11,0:11:39.65:40,0,1324	0/1:9,3:12:53.65:54,0,1053	0/0:7,0:6:18.06:0,18,767	0/0:1,0:1:3.01:0,3,161
chr10	29961036	.	G	GAA	479.74	PASS	AB=0.566;AC=6;AF=0.107;AN=56;BaseQRankSum=2.032;DP=481;FS=2.959;HRun=3;HaplotypeScore=91.8802;InbreedingCoeff=0.4934;MQ=68.02;MQ0=7;MQRankSum=-0.183;QD=7.61;ReadPosRankSum=-0.530;VQSLOD=0.0627;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:18.96:0,19,152	1/1:2,0:2:0.89:2,1,0	0/0:35,0:15:29.72:0,30,276	0/0:40,0:18:31.81:0,32,306	0/0:12,0:12:22.09:0,22,177	0/0:10,0:9:5.36:0,5,47	0/0:29,0:28:42.66:0,43,349	0/0:20,0:20:32.20:0,32,396	0/0:8,0:8:5.35:0,5,47	0/0:15,0:15:15.03:0,15,204	0/0:7,0:7:3.87:0,4,45	0/0:27,0:26:40.89:0,41,309	0/0:19,0:18:23.17:0,23,162	0/0:13,0:13:23.87:0,24,190	0/1:3,16:20:1.29:101,0,1	0/0:11,0:11:4.95:0,5,98	1/1:6,22:27:17.93:289,18,0	0/1:4,9:13:2.27:201,0,2	0/0:11,0:11:27.21:0,27,222	0/0:12,0:12:19.76:0,20,147	0/0:32,0:31:18.70:0,19,313	0/0:15,0:15:14.69:0,15,106	0/0:8,0:8:5.99:0,6,49	0/0:26,0:26:29.49:0,29,236	0/0:13,0:13:19.78:0,20,139	0/0:11,0:11:20.45:0,20,149	0/0:16,0:15:3.39:0,3,83	0/0:3,0:3:5.95:0,6,43
chr10	29961038	.	A	AACAC	1719.56	PASS	AB=1.000;AC=43;AF=0.860;AN=50;BaseQRankSum=-3.543;DP=509;FS=1.365;HRun=0;HaplotypeScore=111.3429;InbreedingCoeff=0.4269;MQ=63.67;MQ0=7;MQRankSum=-1.618;QD=4.67;ReadPosRankSum=-3.215;VQSLOD=1.6564;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:31,0:31:2.51:21,3,0	1/1:5,0:5:2.67:25,3,0	./.	./.	1/1:11,4:16:3.01:70,3,0	1/1:10,0:9:6.89:65,7,0	1/1:28,0:27:13.09:144,13,0	1/1:22,0:22:11.95:108,12,0	1/1:6,3:10:2.92:47,3,0	1/1:17,0:17:11.59:144,12,0	1/1:5,3:9:3.01:70,3,0	1/1:27,0:26:12:134,12,0	1/1:19,0:18:11.94:123,12,0	1/1:13,0:13:3:26,3,0	0/0:18,0:18:6.38:0,6,38	1/1:7,3:11:3.01:52,3,0	0/0:26,0:25:7.46:0,7,19	0/0:13,0:13:11.63:0,12,164	1/1:15,0:15:3:28,3,0	./.	1/1:36,0:35:18:231,18,0	1/1:16,0:16:11.93:126,12,0	0/1:10,0:10:0:0,0,0	1/1:26,0:26:8.54:69,9,0	1/1:9,0:13:3.01:47,3,0	1/1:13,0:13:7.57:88,8,0	1/1:16,0:15:14.94:156,15,0	1/1:5,0:5:6.44:69,6,0
chr10	29961275	.	C	CCCCG	5628.02	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-0.906;DP=327;FS=13.554;HRun=0;HaplotypeScore=94.7919;InbreedingCoeff=0.6227;MQ=78.04;MQ0=1;MQRankSum=-7.044;QD=18.76;ReadPosRankSum=-5.836;VQSLOD=2.1100;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:20:51.29:518,51,0	1/1:0,3:5:3.01:74,3,0	0/0:12,0:12:33.01:0,33,376	0/0:15,0:15:21.66:0,22,383	1/1:2,0:8:2.98:21,3,0	1/1:12,0:13:38.91:368,39,0	1/1:1,0:16:3.84:21,4,0	1/1:13,0:13:26.62:211,27,0	1/1:7,0:7:14.14:97,14,0	1/1:6,0:6:11.57:71,12,0	1/1:6,0:6:12.41:91,12,0	1/1:9,0:9:23.93:247,24,0	1/1:11,0:11:26.96:222,27,0	1/1:16,0:16:30.80:243,31,0	1/1:14,0:14:41.95:404,42,0	1/1:12,0:12:29.94:299,30,0	1/1:1,12:23:2.71:40,3,0	1/1:22,0:22:59.90:513,60,0	1/1:7,0:7:17.93:168,18,0	1/1:10,0:10:20.96:212,21,0	1/1:15,0:15:41.93:386,42,0	1/1:3,0:3:8.93:66,9,0	1/1:8,0:8:11.93:90,12,0	1/1:15,0:15:44.93:375,45,0	1/1:8,0:9:20.83:229,21,0	1/1:7,0:7:17.95:152,18,0	1/1:22,0:22:56.50:486,57,0	1/1:1,0:1:2.99:24,3,0
chr10	29961752	.	AAAAC	A	2210.03	PASS	AB=0.832;AC=7;AF=0.125;AN=56;BaseQRankSum=9.674;DP=687;FS=0.000;HRun=0;HaplotypeScore=109.2285;InbreedingCoeff=0.6166;MQ=71.46;MQ0=1;MQRankSum=-0.029;QD=18.42;ReadPosRankSum=3.241;VQSLOD=2.7981;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:75.24:0,75,1656	0/1:9,1:10:27.60:28,0,383	0/0:33,0:27:17.48:0,17,404	0/0:32,0:29:20.03:0,20,591	0/0:21,0:21:51.18:0,51,1207	0/0:24,0:24:57.18:0,57,1263	0/0:33,0:33:57.18:0,57,1290	0/0:27,0:27:36.12:0,36,777	0/0:8,0:19:27.09:0,27,461	0/0:25,0:25:33.11:0,33,723	0/0:17,0:17:42.14:0,42,966	0/0:17,0:17:36.12:0,36,850	0/0:23,0:23:57.20:0,57,1326	0/0:27,0:27:20.57:0,21,1545	1/1:4,10:13:21.07:341,21,0	0/0:29,0:29:72.24:0,72,1674	0/1:12,28:40:0.01:1047,0,0	1/1:10,24:34:57.19:925,57,0	0/0:23,0:23:30.10:0,30,692	0/0:29,0:29:72.25:0,72,1602	0/0:30,0:30:60.21:0,60,1383	0/1:22,0:22:10.43:10,0,718	0/0:20,0:20:45.15:0,45,1089	0/0:35,0:35:75.26:0,75,1805	0/0:20,0:20:42.14:0,42,995	0/0:18,0:18:33.73:0,34,919	0/0:24,0:23:60.18:0,60,1248	0/0:6,0:6:18.06:0,18,343
chr10	29964439	.	T	TAC	12530.21	PASS	AB=0.653;AC=34;AF=0.607;AN=56;BaseQRankSum=-14.104;DP=820;FS=0.000;HRun=0;HaplotypeScore=111.2166;InbreedingCoeff=0.1994;MQ=60.81;MQ0=19;MQRankSum=1.847;QD=20.68;ReadPosRankSum=-0.608;VQSLOD=4.9185;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:21,30:52:6.93:847,0,7	0/1:2,8:10:10.40:301,0,10	0/0:37,0:5:3.01:0,3,32	0/0:43,0:10:4.74:0,5,65	1/1:10,20:30:57.19:877,57,0	0/1:6,9:16:47.88:211,0,48	0/1:16,11:27:80.90:335,0,81	0/1:18,14:32:58.31:475,0,58	0/0:10,0:35:59.52:0,60,290	0/1:17,13:31:7.51:588,0,8	0/1:15,7:23:30.62:294,0,31	1/1:8,24:32:51.64:791,52,0	1/1:6,27:34:69.23:1058,69,0	0/1:10,20:31:32.72:723,0,33	0/0:6,0:40:82.38:0,82,405	1/1:13,27:42:22.28:1029,22,0	0/0:13,0:31:45.40:0,45,224	0/0:8,0:26:40.98:0,41,195	1/1:11,8:21:4.60:350,5,0	1/1:10,13:24:18.16:450,18,0	1/1:21,28:49:54.18:824,54,0	0/1:8,15:24:6.79:634,0,7	1/1:8,6:15:3.70:214,4,0	1/1:17,16:33:17.38:601,17,0	1/1:4,15:18:12.11:617,12,0	0/1:10,8:19:9.63:293,0,10	1/1:9,22:32:19.71:741,20,0	1/1:2,8:10:18.06:279,18,0
chr10	29964914	.	GAGAC	G	10131.87	PASS	AB=0.600;AC=49;AF=0.907;AN=54;BaseQRankSum=-1.150;DP=581;FS=6.399;HRun=0;HaplotypeScore=118.5658;InbreedingCoeff=0.6880;MQ=63.93;MQ0=7;MQRankSum=0.760;QD=20.06;ReadPosRankSum=4.192;VQSLOD=4.2910;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,28:38:18.06:292,18,0	1/1:4,2:6:15.02:215,15,0	0/0:29,0:16:21.07:0,21,367	0/0:19,1:14:12.34:0,12,204	1/1:11,13:24:14.91:182,15,0	1/1:11,6:17:23.95:389,24,0	1/1:6,25:31:30.10:485,30,0	1/1:15,13:26:31.31:425,31,0	1/1:14,0:21:23.69:288,24,0	1/1:7,6:13:18.03:262,18,0	0/1:6,12:18:15.46:32,0,15	1/1:14,3:17:27.09:430,27,0	1/1:21,5:26:51.15:817,51,0	1/1:15,1:16:12.03:164,12,0	1/1:13,3:16:33.11:507,33,0	1/1:22,1:23:42.13:657,42,0	1/1:25,5:30:66.11:929,66,0	1/1:24,0:23:21.46:489,21,0	1/1:13,1:14:12.02:151,12,0	1/1:7,10:17:17.76:158,18,0	1/1:34,3:37:59.87:938,60,0	./.	1/1:11,1:12:6.02:97,6,0	1/1:18,4:22:32.78:527,33,0	1/1:12,5:17:29.29:412,29,0	1/1:5,15:21:48.08:734,48,0	1/1:9,1:10:18.05:265,18,0	1/1:7,0:7:18.06:289,18,0
chr10	29964944	.	GCC	G	794.21	PASS	AB=0.931;AC=19;AF=0.339;AN=56;BaseQRankSum=0.916;DP=601;FS=6.148;HRun=2;HaplotypeScore=143.6821;InbreedingCoeff=-0.0015;MQ=52.53;MQ0=43;MQRankSum=0.576;QD=2.47;ReadPosRankSum=5.684;VQSLOD=-0.6240;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:10.05:0,10,175	0/0:6,0:6:3.41:0,3,44	0/0:47,0:6:17.83:0,18,255	0/0:42,0:10:12.91:0,13,296	0/0:17,0:17:5.61:0,6,48	0/0:14,0:14:6.88:0,7,81	0/0:34,0:32:4.16:0,4,150	0/1:24,0:22:1.58:2,0,360	1/1:21,0:21:0.74:167,1,0	0/0:12,0:12:2.79:0,3,209	0/1:17,0:17:10.78:11,0,76	0/0:17,0:17:8.43:0,8,116	0/1:24,0:24:27.37:27,0,112	0/1:5,13:18:49.06:49,0,68	0/1:16,5:21:56.93:57,0,112	0/0:21,0:21:12.54:0,13,93	0/1:29,6:34:99:234,0,122	1/1:15,2:16:25.69:236,26,0	0/0:14,0:10:13.15:0,13,167	0/0:15,0:15:7.24:0,7,98	0/1:47,0:47:80.47:80,0,177	0/1:16,0:16:0.05:0,0,0	0/0:6,0:6:1.41:0,1,59	0/1:28,0:28:3.15:3,0,179	0/1:17,0:17:8.24:8,0,101	0/1:25,0:25:27.43:27,0,308	1/1:5,0:5:10.03:39,10,0	1/1:6,0:6:0.88:2,1,0
chr10	29964948	.	GAC	G	1646.42	PASS	AB=0.867;AC=36;AF=0.750;AN=48;BaseQRankSum=-2.128;DP=606;FS=4.620;HRun=0;HaplotypeScore=139.9110;InbreedingCoeff=-0.0912;MQ=51.85;MQ0=43;MQRankSum=-0.204;QD=3.44;ReadPosRankSum=1.190;VQSLOD=2.6914;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:30,6:36:15.04:164,15,0	0/1:5,2:7:15.82:27,0,16	./.	./.	1/1:15,1:16:3.01:33,3,0	1/1:10,4:15:8.54:60,9,0	1/1:30,5:33:14.85:134,15,0	./.	1/1:13,0:20:10.03:61,10,0	1/1:9,1:11:11.76:95,12,0	0/1:14,2:16:26.83:27,0,39	1/1:10,5:17:11.82:99,12,0	0/1:16,6:24:3.61:132,0,4	0/0:19,0:19:6.66:0,7,171	0/1:24,0:25:1.40:1,0,168	1/1:16,5:22:8.86:78,9,0	0/1:32,1:35:80.04:80,0,249	0/1:22,0:23:4.42:4,0,163	0/1:14,0:11:34.06:34,0,35	0/1:9,2:13:26.85:27,0,39	1/1:39,8:47:20.66:209,21,0	1/1:13,2:15:2.99:24,3,0	0/1:5,2:7:26.91:27,0,39	1/1:14,11:26:17.54:175,18,0	1/1:11,7:18:12.03:131,12,0	0/1:21,4:28:21.63:150,0,22	1/1:4,0:5:2.84:14,3,0	./.
chr10	29965982	.	GTA	G	17678.88	PASS	AB=1.000;AC=53;AF=0.946;AN=56;BaseQRankSum=-1.961;DP=663;FS=0.000;HRun=0;HaplotypeScore=103.8071;InbreedingCoeff=0.7285;MQ=58.27;MQ0=11;MQRankSum=0.260;QD=27.41;ReadPosRankSum=2.814;VQSLOD=5.9290;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,35:43:81.87:1054,82,0	1/1:1,10:10:21.07:273,21,0	0/0:18,0:7:8.98:0,9,108	0/1:11,0:7:4.28:4,0,8	1/1:2,21:23:42.14:546,42,0	1/1:1,18:18:39.07:506,39,0	1/1:3,17:20:42.11:545,42,0	1/1:6,32:38:93.25:1150,93,0	1/1:2,24:26:53.65:700,54,0	1/1:3,27:29:78.23:996,78,0	1/1:0,22:21:54.18:702,54,0	1/1:1,16:17:33.11:428,33,0	1/1:2,25:25:53.69:700,54,0	1/1:2,22:24:53.69:700,54,0	1/1:1,29:30:56.70:739,57,0	1/1:1,21:21:45.15:584,45,0	1/1:1,19:20:45.15:584,45,0	1/1:2,16:18:30.10:390,30,0	1/1:5,10:15:30.10:389,30,0	1/1:0,36:36:84.27:1091,84,0	1/1:2,17:18:45.15:585,45,0	1/1:1,25:26:60.12:780,60,0	1/1:3,18:21:36.03:467,36,0	1/1:2,19:20:45.15:585,45,0	1/1:4,17:21:45.15:585,45,0	1/1:0,25:25:69.21:882,69,0	1/1:9,22:30:51.17:662,51,0	1/1:1,27:28:81.26:1052,81,0
chr10	29966130	.	C	CTGTGTG	3815.96	PASS	AB=0.788;AC=45;AF=0.804;AN=56;BaseQRankSum=-0.354;DP=590;FS=2.044;HRun=0;HaplotypeScore=145.2614;InbreedingCoeff=0.3602;MQ=48.60;MQ0=10;MQRankSum=1.479;QD=7.51;ReadPosRankSum=1.606;VQSLOD=2.8313;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:23:8.66:193,9,0	1/1:8,0:8:9:164,9,0	0/0:33,0:15:2.99:0,3,38	0/0:23,0:12:1.82:0,2,56	0/1:14,0:25:0:0,0,0	0/1:11,11:23:0:0,0,0	1/1:22,0:22:9.93:77,10,0	1/1:38,0:37:37.77:563,38,0	1/1:28,0:27:2.99:24,3,0	0/1:19,0:19:16.01:204,0,16	0/1:5,0:15:0:0,0,0	1/1:5,15:19:3.01:51,3,0	1/1:18,1:18:24.81:259,25,0	1/1:24,1:25:14.78:294,15,0	0/0:13,13:26:0.62:0,1,1	1/1:18,0:18:6.11:150,6,0	1/1:13,0:13:12.49:211,12,0	1/1:10,0:10:8.92:168,9,0	1/1:10,0:11:9.03:181,9,0	1/1:21,0:20:3.08:39,3,0	1/1:17,0:16:6.49:87,6,0	1/1:24,0:21:9.03:191,9,0	1/1:19,0:15:3:25,3,0	0/1:15,0:15:0:0,0,0	1/1:9,0:18:0.47:1,0,0	1/1:26,0:26:34.79:538,35,0	1/1:12,0:31:9.02:166,9,0	1/1:12,0:12:15.02:231,15,0
chr10	29966155	.	T	TGTGAGA	3734.13	PASS	AB=0.776;AC=48;AF=0.889;AN=54;BaseQRankSum=1.602;DP=500;FS=0.000;HRun=0;HaplotypeScore=140.1285;InbreedingCoeff=0.2217;MQ=40.47;MQ0=14;MQRankSum=1.279;QD=7.94;ReadPosRankSum=-0.157;VQSLOD=2.2027;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:16:11.67:116,12,0	1/1:11,0:10:15.42:164,15,0	0/0:11,0:2:2.97:0,3,21	0/0:4,0:1:2.92:0,3,17	1/1:21,0:20:3.01:50,3,0	1/1:25,0:25:6.49:98,6,0	1/1:22,0:22:18.96:230,19,0	1/1:37,0:36:5.58:310,6,0	0/1:5,18:26:38.72:44,0,39	0/1:14,0:14:40.01:212,0,40	1/1:15,0:15:2.80:25,3,0	1/1:20,0:19:12:164,12,0	1/1:13,0:19:24.45:220,24,0	1/1:15,1:25:14.66:117,15,0	1/1:20,0:20:5.59:62,6,0	1/1:9,0:23:9.31:69,9,0	1/1:7,0:7:13.89:91,14,0	1/1:9,0:13:15.79:162,16,0	1/1:16,0:14:20.88:222,21,0	1/1:18,0:17:11.84:138,12,0	1/1:10,0:9:9.50:186,10,0	1/1:24,0:21:8.94:68,9,0	1/1:17,0:13:3:25,3,0	1/1:10,0:11:5.80:72,6,0	./.	1/1:16,0:23:58.47:588,58,0	1/1:24,0:20:11.89:148,12,0	1/1:8,0:8:17.85:155,18,0
chr10	29967054	.	CGT	C	13692.86	PASS	AB=0.625;AC=47;AF=0.839;AN=56;BaseQRankSum=-5.350;DP=849;FS=3.954;HRun=0;HaplotypeScore=121.5740;InbreedingCoeff=0.6298;MQ=53.47;MQ0=31;MQRankSum=3.232;QD=18.97;ReadPosRankSum=4.582;VQSLOD=4.9684;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,31:40:46.50:674,46,0	1/1:2,8:10:15.05:181,15,0	0/0:47,0:13:23.06:0,23,286	0/0:48,0:11:28.20:0,28,322	1/1:4,16:19:42.13:506,42,0	1/1:5,16:22:39.11:461,39,0	1/1:13,29:41:60.05:723,60,0	1/1:10,23:30:62.48:686,62,0	0/0:12,1:29:42.01:0,42,407	1/1:13,18:31:62.97:715,63,0	0/1:4,17:22:3.20:439,0,3	1/1:5,24:31:59.54:678,60,0	1/1:4,25:29:60.18:723,60,0	1/1:5,20:24:38.58:469,39,0	1/1:6,29:34:78.24:940,78,0	1/1:7,24:31:51.15:612,51,0	1/1:5,28:32:41.41:735,41,0	1/1:7,15:22:42.13:506,42,0	1/1:12,9:19:28.80:359,29,0	1/1:5,9:15:27.08:326,27,0	1/1:35,43:80:99:1176,103,0	1/1:7,15:23:47.98:556,48,0	1/1:5,9:15:26.84:303,27,0	1/1:14,40:55:71.80:846,72,0	0/1:11,10:21:30.18:163,0,30	1/1:7,11:20:38.76:404,39,0	0/1:10,12:22:66.19:254,0,66	1/1:10,9:21:22.96:259,23,0
chr10	29968118	.	AAT	A	888.41	PASS	AB=1.000;AC=9;AF=0.225;AN=40;BaseQRankSum=-1.354;DP=227;FS=7.343;HRun=0;HaplotypeScore=37.7889;InbreedingCoeff=0.4298;MQ=78.94;MQ0=0;MQRankSum=2.085;QD=10.58;ReadPosRankSum=4.074;VQSLOD=1.6490;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:3.46:0,3,25	0/0:4,0:6:3:0,3,26	0/0:9,0:9:0:0,0,0	0/0:13,0:9:2.04:0,2,6	0/0:8,0:8:2.37:0,2,8	./.	0/0:7,0:7:3:0,3,27	0/1:27,0:26:14.10:14,0,120	1/1:5,5:10:12.04:147,12,0	0/0:6,0:6:5.99:0,6,51	0/0:5,0:5:3:0,3,25	./.	0/0:5,0:11:6:0,6,53	./.	1/1:4,5:10:14.88:161,15,0	./.	1/1:8,8:16:18.06:220,18,0	1/1:4,17:21:39.12:477,39,0	0/0:4,0:6:5.19:0,5,49	./.	./.	./.	./.	0/0:3,0:3:2.99:0,3,24	0/0:6,0:6:3.87:0,4,25	0/0:6,0:6:11.99:0,12,128	0/0:5,0:9:1.74:0,2,24	0/0:1,0:4:9:0,9,79
chr10	29968318	.	G	GT	2885.79	PASS	AB=0.987;AC=46;AF=0.821;AN=56;BaseQRankSum=2.262;DP=427;FS=0.000;HRun=12;HaplotypeScore=86.8313;InbreedingCoeff=0.7236;MQ=79.73;MQ0=2;MQRankSum=-2.313;QD=8.83;ReadPosRankSum=0.768;VQSLOD=2.8500;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,13:26:37.24:270,37,0	1/1:0,3:4:6.73:43,7,0	0/0:55,0:29:12.59:0,13,156	0/1:37,1:18:5.01:5,0,16	1/1:4,9:13:23.63:165,24,0	1/1:2,3:13:13.69:98,14,0	1/1:4,10:18:38.22:270,38,0	1/1:26,3:33:44.02:268,44,0	0/1:6,0:6:0:0,0,0	1/1:2,5:9:19.28:119,19,0	1/1:3,5:11:20.55:140,21,0	1/1:8,0:8:15.21:78,15,0	1/1:9,8:18:17.55:140,18,0	1/1:3,2:12:17.53:118,18,0	0/0:12,0:12:11.44:0,11,50	1/1:1,4:13:8.72:58,9,0	0/0:17,0:17:14.03:0,14,77	0/0:14,0:15:14.82:0,15,106	1/1:7,5:16:32.34:231,32,0	1/1:9,1:14:37.70:220,38,0	1/1:16,3:18:23.52:197,24,0	1/1:8,0:8:18.84:97,19,0	1/1:2,5:7:2.68:28,3,0	1/1:6,0:5:8.28:40,8,0	1/1:2,8:11:18.80:151,19,0	1/1:2,5:9:26.33:177,26,0	1/1:6,4:11:9.37:78,9,0	1/1:1,2:3:6.89:57,7,0
chr10	29968330	.	TGG	T	2812.10	PASS	AB=0.971;AC=45;AF=0.804;AN=56;BaseQRankSum=0.769;DP=433;FS=17.700;HRun=11;HaplotypeScore=87.3447;InbreedingCoeff=0.7492;MQ=79.25;MQ0=4;MQRankSum=-1.097;QD=8.37;ReadPosRankSum=3.436;VQSLOD=0.3665;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:25:19:216,19,0	1/1:6,0:6:12.88:110,13,0	0/1:63,1:31:17.82:18,0,330	0/0:48,0:23:38.36:0,38,377	1/1:11,0:11:14.96:138,15,0	1/1:15,0:15:20.43:161,20,0	1/1:17,0:17:27.72:191,28,0	1/1:18,0:18:25.59:177,26,0	0/0:9,0:9:9.03:0,9,112	1/1:9,1:10:13.76:115,14,0	1/1:8,0:8:8.53:58,9,0	1/1:10,0:10:19.79:161,20,0	1/1:13,0:13:17.51:147,18,0	1/1:13,0:13:19.87:185,20,0	0/0:12,0:12:16.85:0,17,208	1/1:13,0:13:8.69:68,9,0	0/0:16,0:16:36.10:0,36,455	0/0:12,0:12:24.08:0,24,348	1/1:13,2:15:29.62:232,30,0	1/1:16,0:16:14.70:128,15,0	1/1:18,0:16:27.27:224,27,0	1/1:7,1:8:5.62:40,6,0	1/1:9,0:9:14.87:141,15,0	1/1:6,0:5:2.88:17,3,0	1/1:12,0:12:13.66:77,14,0	1/1:12,0:12:21.86:191,22,0	1/1:7,0:9:7.39:62,7,0	1/1:6,0:6:15.88:136,16,0
chr10	29968833	.	A	ATGTGTG	7944.78	PASS	AB=0.726;AC=40;AF=0.833;AN=48;BaseQRankSum=-2.282;DP=550;FS=3.006;HRun=0;HaplotypeScore=194.1893;InbreedingCoeff=0.3433;MQ=60.54;MQ0=11;MQRankSum=-4.795;QD=18.61;ReadPosRankSum=-0.385;VQSLOD=4.6500;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:5,8:15:0:0,0,0	1/1:3,6:9:12.04:370,12,0	0/0:50,0:24:28.18:0,28,432	0/1:50,0:24:7.82:8,0,456	1/1:5,9:15:9:136,9,0	0/1:10,17:26:0:0,0,1	1/1:9,15:25:18.22:490,18,0	1/1:18,4:22:36.08:955,36,0	0/0:9,0:15:0.51:0,1,21	1/1:16,5:24:40.84:891,41,0	./.	1/1:11,6:17:3:25,3,0	0/1:10,7:18:45.85:359,0,46	1/1:9,13:22:14.65:420,15,0	1/1:12,2:23:6.02:158,6,0	1/1:6,6:13:9.03:301,9,0	1/1:14,1:22:23.36:464,23,0	1/1:8,0:10:6.02:158,6,0	1/1:15,3:18:27.07:665,27,0	./.	1/1:12,3:14:3:25,3,0	./.	1/1:6,8:16:3.01:39,3,0	./.	1/1:9,9:18:2.26:38,2,0	1/1:10,7:17:40:1052,40,0	1/1:4,10:15:17.73:601,18,0	1/1:4,8:12:27.09:788,27,0
chr10	29968847	.	GCGCGCA	G	684.19	PASS	AB=0.976;AC=19;AF=0.352;AN=54;BaseQRankSum=-2.397;DP=547;FS=2.307;HRun=0;HaplotypeScore=195.1455;InbreedingCoeff=-0.2365;MQ=41.12;MQ0=16;MQRankSum=1.131;QD=2.09;ReadPosRankSum=-4.623;VQSLOD=1.3039;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:2.59:0,3,56	0/0:8,0:8:0.64:0,1,78	0/1:62,1:17:42.45:42,0,570	0/0:73,0:26:13.77:0,14,1246	1/1:17,1:18:9:112,9,0	0/0:22,1:22:0.46:0,0,1	0/1:18,0:18:17.18:17,0,61	0/1:21,0:20:90.32:90,0,589	0/0:19,0:19:28.27:0,28,756	0/1:21,0:21:86.59:87,0,516	0/1:10,0:10:0:1,0,0	0/1:12,3:15:19.46:19,0,24	0/1:16,0:16:58.36:58,0,136	0/1:22,1:23:39.87:113,0,40	0/1:22,0:21:13.69:47,0,14	0/0:11,0:11:7.96:0,8,60	0/1:19,0:19:30.92:31,0,464	0/1:9,0:9:28.28:28,0,168	0/1:17,0:16:58.02:58,0,449	./.	1/1:13,0:12:3:25,3,0	0/1:14,1:15:0.30:0,0,0	0/0:15,1:16:2.68:0,3,37	0/0:9,0:9:0:0,0,0	0/0:15,1:15:2.80:0,3,59	0/1:14,1:15:90.68:91,0,384	0/0:13,0:13:8.65:0,9,85	0/1:11,0:11:0.28:0,0,97
chr10	29968852	.	CAT	C	922.78	PASS	AB=0.941;AC=17;AF=0.315;AN=54;BaseQRankSum=1.309;DP=558;FS=1.217;HRun=0;HaplotypeScore=177.7967;InbreedingCoeff=-0.0000;MQ=31.78;MQ0=19;MQRankSum=-1.466;QD=3.94;ReadPosRankSum=4.507;VQSLOD=2.7832;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:19:2.64:12,3,0	0/1:8,0:8:4.92:35,0,5	0/0:70,0:17:22.92:0,23,482	0/0:74,0:25:55.75:0,56,718	0/0:15,0:15:0.46:0,0,1	0/0:20,2:21:0:0,0,0	0/1:18,1:19:20.52:28,0,21	0/1:22,0:21:85.76:184,0,86	0/0:17,0:17:9.08:0,9,386	0/1:18,2:19:17.88:269,0,18	0/0:8,2:10:0.47:0,0,1	1/1:14,0:14:2.34:24,2,0	0/1:14,2:16:43.11:50,0,43	0/1:20,2:22:3.29:32,0,3	0/1:22,1:22:0.81:1,0,50	0/1:9,2:11:9.59:10,0,28	0/0:20,0:20:16.70:0,17,323	0/0:9,0:9:17.63:0,18,182	0/1:17,0:16:72.99:88,0,73	0/0:16,0:16:0.47:0,0,1	./.	0/0:14,1:15:0.94:0,1,1	0/0:14,2:16:3:0,3,25	0/0:8,0:8:0:0,0,0	0/0:16,0:15:2.75:0,3,25	0/1:15,0:16:44.54:137,0,45	0/1:15,1:15:3.94:54,0,4	1/1:8,3:11:8.95:133,9,0
chr10	29968853	.	ATG	A	1963.58	PASS	AB=0.749;AC=28;AF=0.519;AN=54;BaseQRankSum=-0.251;DP=577;FS=0.682;HRun=0;HaplotypeScore=184.0743;InbreedingCoeff=0.4924;MQ=31.20;MQ0=21;MQRankSum=-3.006;QD=6.99;ReadPosRankSum=3.943;VQSLOD=3.3437;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:12,8:20:3.45:38,3,0	1/1:3,5:8:8.97:91,9,0	0/0:70,0:17:30.07:0,30,385	0/0:74,0:24:47.80:0,48,569	0/0:8,7:15:0.46:0,0,1	0/0:13,10:22:2.22:0,2,7	1/1:9,10:20:7.03:76,7,0	1/1:11,13:22:5.77:404,6,0	0/0:16,0:16:24.04:0,24,301	1/1:10,10:19:37.76:436,38,0	0/0:5,5:10:0.47:0,0,1	1/1:6,9:15:3:37,3,0	1/1:11,5:16:5.41:74,5,0	0/1:7,16:23:4.64:62,0,5	0/1:24,0:23:0.34:0,0,44	1/1:6,5:11:3.01:35,3,0	0/0:20,0:20:21.93:0,22,317	0/0:9,0:9:16.14:0,16,163	1/1:8,9:16:24.04:281,24,0	1/1:9,7:17:0.97:2,1,0	0/0:10,8:12:1.25:0,1,3	0/0:10,7:17:0.42:0,0,1	0/0:7,9:16:0:0,0,0	./.	0/1:12,7:19:0.29:1,0,0	0/1:10,7:18:24.47:244,0,24	1/1:11,6:16:11.49:144,11,0	1/1:7,4:11:20.15:192,20,0
chr10	29968869	.	GCATA	G	1688.20	PASS	AB=0.860;AC=22;AF=0.393;AN=56;BaseQRankSum=-2.580;DP=546;FS=38.994;HRun=0;HaplotypeScore=169.9990;InbreedingCoeff=-0.1587;MQ=29.92;MQ0=28;MQRankSum=2.419;QD=5.31;ReadPosRankSum=-4.615;VQSLOD=-0.2178;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:13,3:15:4.18:0,4,28	0/1:8,1:9:48.04:152,0,48	0/0:56,0:11:33.07:0,33,535	0/0:65,0:19:53.71:0,54,829	0/1:10,4:14:0.27:0,0,0	0/1:20,1:20:16.73:17,0,30	0/0:16,1:17:9.30:0,9,71	0/1:28,5:29:99:193,0,640	0/0:14,0:13:17.71:0,18,311	0/1:24,1:22:99:247,0,257	0/1:7,0:8:0.03:0,0,0	0/0:15,3:17:12.88:0,13,142	0/1:11,2:13:57.47:73,0,57	0/0:22,3:25:8.10:0,8,41	0/1:19,6:25:27.44:259,0,27	0/0:8,1:9:2.44:0,2,11	0/1:16,4:20:98.54:99,0,420	0/1:6,5:12:99:191,0,112	0/1:17,1:17:20.29:20,0,380	1/1:12,0:13:12.01:231,12,0	0/1:16,1:11:48.86:54,0,49	1/1:12,0:12:2.70:61,3,0	0/1:12,5:17:0.07:1,0,0	0/0:8,0:8:0.17:0,0,0	1/1:17,2:18:4.81:122,5,0	0/1:15,2:16:68.47:68,0,295	0/1:11,1:13:42.49:42,0,102	0/1:8,1:9:6.86:7,0,97
chr10	29968873	.	A	ATG	454.76	PASS	AB=0.971;AC=40;AF=0.769;AN=52;BaseQRankSum=-1.694;DP=562;FS=0.000;HRun=0;HaplotypeScore=181.3511;InbreedingCoeff=0.2282;MQ=31.17;MQ0=26;MQRankSum=0.859;QD=1.16;ReadPosRankSum=-2.043;VQSLOD=1.9736;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:17:2.99:24,3,0	1/1:9,0:9:2.99:24,3,0	./.	./.	0/0:15,0:15:0.23:0,0,1	1/1:23,0:22:3.08:19,3,0	0/1:18,0:18:0:0,0,0	1/1:35,0:31:4.86:26,5,0	1/1:6,11:16:0.23:83,0,0	0/0:26,0:22:0.10:0,0,7	1/1:9,0:9:2.69:23,3,0	0/1:18,0:17:0.23:0,0,1	0/1:11,0:14:1.41:1,0,13	1/1:24,0:25:4.07:12,4,0	1/1:25,0:24:3.16:26,3,0	0/1:10,0:10:0:0,0,0	1/1:22,0:22:8.46:91,8,0	1/1:13,0:13:2.38:32,2,0	0/0:20,0:19:0.35:0,0,0	1/1:13,0:13:4.72:21,5,0	1/1:17,0:11:3.56:13,4,0	1/1:13,0:14:2.66:24,3,0	0/1:18,0:18:0.03:0,0,0	1/1:12,0:12:2.92:22,3,0	1/1:18,0:18:0.49:2,0,0	1/1:19,0:18:8.39:59,8,0	1/1:15,0:14:6.38:41,6,0	0/1:9,0:9:0:0,0,0
chr10	29968907	.	GTGTA	G	2233.28	PASS	AB=0.993;AC=34;AF=0.607;AN=56;BaseQRankSum=-1.861;DP=482;FS=7.164;HRun=0;HaplotypeScore=132.1357;InbreedingCoeff=-0.1172;MQ=49.83;MQ0=18;MQRankSum=0.691;QD=5.70;ReadPosRankSum=-1.456;VQSLOD=1.9798;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:23,1:23:15.65:120,16,0	1/1:4,1:5:10.47:67,10,0	0/0:28,0:16:13.32:0,13,276	0/1:30,0:19:8.51:9,0,217	0/1:15,1:16:28.56:118,0,29	0/1:25,0:24:12.79:169,0,13	1/1:15,0:15:5.99:50,6,0	0/1:19,0:17:19.16:137,0,19	0/0:23,0:22:5.87:0,6,252	0/1:26,0:23:5.38:291,0,5	0/1:11,0:11:9.56:82,0,10	0/1:13,0:12:8.66:14,0,9	0/1:14,0:14:33.25:52,0,33	0/1:16,0:16:6.47:52,0,6	0/0:28,0:27:34.97:0,35,349	1/1:11,1:12:8.99:75,9,0	0/1:19,0:19:16.20:16,0,146	0/1:15,0:15:52.46:52,0,117	0/1:7,0:7:25.03:43,0,25	1/1:12,0:12:20.87:157,21,0	0/1:19,0:16:21.01:95,0,21	1/1:19,0:19:13.70:209,14,0	1/1:15,0:15:11.96:94,12,0	0/0:11,0:11:3.05:0,3,20	1/1:14,1:14:14.52:113,15,0	0/1:21,1:21:91.98:229,0,92	1/1:14,0:13:0.39:93,0,0	1/1:9,0:9:5.71:65,6,0
chr10	29969623	.	CCCA	C	251.68	PASS	AB=1.000;AC=8;AF=0.143;AN=56;BaseQRankSum=-0.483;DP=362;FS=22.332;HRun=0;HaplotypeScore=71.7570;InbreedingCoeff=0.5636;MQ=80.08;MQ0=1;MQRankSum=-0.545;QD=3.70;ReadPosRankSum=-1.756;VQSLOD=-0.1856;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:52.98:0,53,210	0/0:6,0:6:12.33:0,12,56	0/0:11,0:11:5.33:0,5,178	0/0:11,0:11:16.50:0,17,182	0/0:11,0:11:18.49:0,18,98	0/0:18,0:18:34.25:0,34,126	0/0:20,0:20:35.48:0,35,217	0/0:18,0:18:49.53:0,50,388	0/0:6,0:6:15.03:0,15,229	0/0:18,0:18:41.42:0,41,199	0/0:7,0:7:13.27:0,13,75	0/0:12,0:12:7.41:0,7,89	0/0:7,0:7:5.21:0,5,47	0/0:21,0:21:45.36:0,45,204	1/1:3,17:20:8.59:152,9,0	0/0:14,0:14:28.81:0,29,101	1/1:0,11:11:6.33:35,6,0	1/1:1,12:13:12.04:185,12,0	0/1:10,0:10:2.24:2,0,40	0/0:14,0:14:20.95:0,21,178	0/0:13,0:12:10.83:0,11,103	0/0:13,0:13:5.92:0,6,63	0/0:5,0:5:7.73:0,8,40	0/0:13,0:13:9.58:0,10,99	0/0:12,0:12:10.88:0,11,82	0/1:14,0:14:3.33:3,0,197	0/0:8,0:8:17.85:0,18,88	0/0:6,0:6:16.11:0,16,110
chr10	29969624	.	CCA	C	1526.21	PASS	AB=0.964;AC=30;AF=0.536;AN=56;BaseQRankSum=8.797;DP=355;FS=1.030;HRun=0;HaplotypeScore=58.3677;InbreedingCoeff=-0.2392;MQ=77.18;MQ0=1;MQRankSum=-0.205;QD=4.88;ReadPosRankSum=9.172;VQSLOD=1.3242;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:28,2:30:7.32:215,7,0	0/1:6,0:6:12.03:24,0,12	0/0:10,0:10:14.67:0,15,137	0/0:9,0:9:16.80:0,17,158	0/1:11,0:11:14.39:87,0,14	1/1:17,1:18:14.39:129,14,0	0/1:20,0:20:68.53:69,0,83	0/0:17,1:18:30.02:0,30,326	0/0:5,0:5:15:0,15,186	0/1:18,0:18:42.01:42,0,72	0/1:7,0:7:12.78:13,0,46	0/1:11,1:12:26.71:67,0,27	0/1:6,1:7:5.02:83,0,5	0/1:21,0:21:47.90:122,0,48	1/1:19,1:20:8.31:86,8,0	1/1:14,0:14:26.10:89,26,0	1/1:11,0:11:6.33:36,6,0	1/1:13,0:13:12.02:114,12,0	0/1:9,1:10:10.03:63,0,10	0/1:14,0:14:49.73:50,0,101	0/1:11,1:11:27.46:79,0,27	0/1:12,1:13:2.99:77,0,3	0/1:4,0:4:4.50:10,0,4	0/1:11,2:13:19.61:107,0,20	0/1:11,0:11:10.46:54,0,10	0/1:13,1:14:49.88:50,0,115	0/1:8,0:8:24.60:25,0,31	0/1:6,0:6:6.03:6,0,56
chr10	29969626	.	ACC	A	5496.91	PASS	AB=0.750;AC=46;AF=0.821;AN=56;BaseQRankSum=-2.274;DP=347;FS=1.068;HRun=11;HaplotypeScore=46.1221;InbreedingCoeff=0.6612;MQ=77.50;MQ0=1;MQRankSum=0.834;QD=17.67;ReadPosRankSum=4.071;VQSLOD=3.0035;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,23:29:69.16:733,69,0	1/1:3,4:7:12.03:127,12,0	0/0:10,0:11:10.85:0,11,101	0/0:9,0:9:6.02:0,6,91	1/1:2,8:10:21.03:223,21,0	1/1:2,16:18:42.11:447,42,0	1/1:7,12:19:27.03:287,27,0	1/1:12,4:16:11.96:111,12,0	0/0:5,0:5:15.05:0,15,213	1/1:6,11:17:36.07:382,36,0	1/1:4,3:7:6:64,6,0	1/1:3,9:12:18.02:189,18,0	1/1:2,5:7:18.04:190,18,0	1/1:3,17:20:45.10:479,45,0	0/1:19,0:19:3.36:17,0,3	1/1:1,13:14:36.08:376,36,0	0/0:11,0:11:0.89:0,1,2	1/1:13,0:13:10.08:38,10,0	1/1:4,5:9:15.02:159,15,0	1/1:7,6:14:18:190,18,0	1/1:7,5:11:18.01:191,18,0	1/1:3,10:13:23.76:242,24,0	0/1:0,3:4:0.08:55,0,0	1/1:5,8:13:24.02:248,24,0	1/1:3,8:11:29.78:289,30,0	1/1:5,8:14:19.71:202,20,0	1/1:1,6:7:15.04:160,15,0	1/1:3,3:6:9:96,9,0
chr10	29969636	.	CCT	C	889.08	PASS	AB=0.978;AC=22;AF=0.393;AN=56;BaseQRankSum=9.805;DP=354;FS=30.621;HRun=0;HaplotypeScore=61.3117;InbreedingCoeff=-0.3366;MQ=75.70;MQ0=1;MQRankSum=0.214;QD=3.41;ReadPosRankSum=12.021;VQSLOD=-0.5557;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:35,1:36:99:144,0,130	0/1:5,1:6:11.93:41,0,12	0/0:11,0:12:18.69:0,19,188	0/0:7,0:7:6.52:0,7,75	0/1:13,0:13:34.79:35,0,92	0/1:20,0:20:33.20:83,0,33	0/1:14,1:15:23.12:59,0,23	0/0:11,0:11:14.16:0,14,155	0/0:9,0:9:26.96:0,27,316	0/1:16,1:17:71.13:71,0,97	0/1:5,0:5:7.98:8,0,39	0/1:11,0:11:7.74:36,0,8	0/1:8,0:8:29.86:30,0,30	0/1:19,0:19:8.04:96,0,8	0/0:21,0:21:32.30:0,32,232	1/1:13,1:14:29.61:134,30,0	0/0:11,0:11:6.41:0,6,44	0/0:14,0:14:26.19:0,26,177	0/1:8,1:9:8.16:8,0,52	0/1:10,0:10:50.84:51,0,52	0/1:10,0:9:8.62:25,0,9	0/1:17,0:17:42.14:42,0,100	0/0:7,0:7:0.73:0,1,74	0/1:14,0:14:29.73:30,0,68	0/1:13,0:13:33.72:54,0,34	0/1:14,0:14:31.17:31,0,109	1/1:6,0:6:12.06:46,12,0	0/1:4,0:4:11.75:28,0,12
chr10	29971641	.	GCACACACACACACACACACACACACA	G	10570.84	PASS	AB=1.000;AC=44;AF=0.786;AN=56;BaseQRankSum=5.275;DP=559;FS=20.943;HRun=0;HaplotypeScore=317.7789;InbreedingCoeff=0.6118;MQ=59.81;MQ0=17;MQRankSum=-3.524;QD=23.49;ReadPosRankSum=-0.812;VQSLOD=2.2498;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:29:5.73:46,0,6	1/1:10,8:18:18.06:1183,18,0	0/1:33,0:22:0:0,0,0	0/0:40,0:20:9.92:0,10,431	1/1:12,1:14:5.96:45,6,0	1/1:8,9:19:15.05:969,15,0	1/1:12,0:12:3.01:202,3,0	1/1:23,7:30:10.97:117,11,0	0/0:13,0:16:27.09:0,27,1912	1/1:15,5:19:9:302,9,0	1/1:6,8:14:3.01:202,3,0	1/1:9,7:16:12.41:596,12,0	1/1:11,10:20:11.61:807,12,0	1/1:9,4:13:12.04:797,12,0	0/0:12,0:15:30.10:0,30,1235	1/1:12,1:15:6.02:384,6,0	0/0:14,0:15:18.06:0,18,910	0/0:19,0:23:24.55:0,25,1298	1/1:8,0:9:2.90:16,3,0	1/1:10,7:17:6.02:404,6,0	1/1:24,0:20:5.48:33,5,0	1/1:9,4:12:6.42:221,6,0	1/1:7,7:15:12.51:774,13,0	1/1:17,7:23:9.03:606,9,0	1/1:21,9:30:12.04:809,12,0	1/1:20,0:21:6.01:254,6,0	1/1:17,14:30:18.53:1200,19,0	1/1:6,3:9:9.03:604,9,0
chr10	29972680	.	AG	A	12947.87	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-8.519;DP=634;FS=9.635;HRun=2;HaplotypeScore=74.1264;InbreedingCoeff=0.7742;MQ=68.56;MQ0=12;MQRankSum=-2.306;QD=23.20;ReadPosRankSum=3.426;VQSLOD=3.9014;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,35:38:54.36:707,54,0	1/1:2,9:11:26.54:293,27,0	0/0:43,1:22:4.58:0,5,428	0/0:32,0:16:6.88:0,7,189	1/1:2,30:30:65.95:747,66,0	1/1:3,11:14:24.05:280,24,0	1/1:0,19:19:36.12:463,36,0	1/1:2,20:20:53.06:523,53,0	1/1:17,1:18:33.18:187,33,0	1/1:2,18:20:53.81:586,54,0	1/1:2,11:12:17.33:230,17,0	1/1:3,16:19:47.61:554,48,0	1/1:2,19:22:41.41:476,41,0	1/1:1,13:14:12.03:154,12,0	1/1:1,15:16:25.77:343,26,0	1/1:1,16:17:33.09:411,33,0	1/1:14,21:35:72.31:917,72,0	1/1:4,38:41:77.82:1000,78,0	1/1:4,24:27:63.14:723,63,0	1/1:1,25:26:63.04:757,63,0	1/1:1,13:13:18.06:229,18,0	1/1:2,22:24:42.08:505,42,0	1/1:1,22:23:42.29:568,42,0	1/1:1,21:22:48.14:599,48,0	1/1:8,15:23:60.07:697,60,0	1/1:0,17:17:47.96:512,48,0	1/1:8,9:16:33.32:415,33,0	1/1:1,8:9:3.63:73,4,0
chr10	29972681	.	GGA	G	3018.54	PASS	AB=0.979;AC=42;AF=0.750;AN=56;BaseQRankSum=0.569;DP=644;FS=37.945;HRun=0;HaplotypeScore=117.1459;InbreedingCoeff=-0.0368;MQ=68.42;MQ0=11;MQRankSum=-2.627;QD=5.32;ReadPosRankSum=7.023;VQSLOD=0.8146;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:40,0:37:11.24:102,11,0	0/1:11,0:11:23.59:43,0,24	0/0:44,0:22:60.36:0,60,700	0/0:32,0:16:1.36:0,1,234	1/1:31,1:31:51.39:240,51,0	0/1:13,2:15:24.36:117,0,24	1/1:19,0:19:28.46:97,28,0	0/1:25,0:23:46.56:167,0,47	0/1:10,0:19:40.05:40,0,63	1/1:18,1:19:36.72:215,37,0	0/1:16,0:15:20.97:21,0,66	0/1:18,2:20:3.84:159,0,4	1/1:20,1:21:22.65:127,23,0	0/1:14,0:14:12.42:19,0,12	1/1:16,0:16:7.63:55,8,0	1/1:16,0:17:26.72:112,27,0	1/1:32,1:33:20.78:264,21,0	1/1:41,1:41:48.46:248,48,0	0/1:28,0:27:15.45:173,0,15	0/1:27,0:27:28.57:114,0,29	1/1:14,0:13:13.89:47,14,0	1/1:24,1:25:11.70:138,12,0	0/1:25,0:25:24.33:73,0,24	1/1:21,1:22:37.94:165,38,0	1/1:24,0:24:6.16:191,6,0	1/1:17,0:17:30.42:162,30,0	1/1:17,0:16:7.09:76,7,0	1/1:9,0:9:3.02:13,3,0
chr10	29973256	.	AT	A	11693.45	PASS	AB=0.524;AC=49;AF=0.875;AN=56;BaseQRankSum=2.217;DP=587;FS=2.438;HRun=10;HaplotypeScore=97.2129;InbreedingCoeff=0.8393;MQ=68.19;MQ0=0;MQRankSum=-2.927;QD=21.11;ReadPosRankSum=0.504;VQSLOD=5.1640;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,34:38:65.80:800,66,0	1/1:0,4:4:12:104,12,0	0/0:8,0:8:15.04:0,15,159	0/0:8,0:8:7.82:0,8,59	1/1:3,35:38:65.78:800,66,0	1/1:3,27:30:47.80:644,48,0	1/1:1,15:17:40.93:335,41,0	1/1:7,18:25:23.72:424,24,0	0/0:17,0:17:42.11:0,42,457	1/1:2,20:22:56.97:494,57,0	1/1:1,18:19:50.98:442,51,0	1/1:3,23:26:65.97:573,66,0	1/1:1,23:24:62.99:547,63,0	1/1:2,17:19:50.99:443,51,0	1/1:3,24:27:57.46:495,57,0	1/1:0,18:18:44.99:391,45,0	1/1:2,16:18:47.99:417,48,0	1/1:1,15:16:41.98:365,42,0	1/1:8,17:26:25.82:440,26,0	1/1:2,19:21:53.98:468,54,0	1/1:0,7:7:18:156,18,0	1/1:2,18:20:20.82:410,21,0	1/1:3,23:26:62.98:547,63,0	1/1:0,13:13:32.99:287,33,0	1/1:4,31:35:83.97:729,84,0	1/1:4,22:26:62.97:547,63,0	1/1:2,25:28:74.02:631,74,0	0/1:1,10:11:3.10:204,0,3
chr10	29973828	.	T	TCC	6535.74	PASS	AB=0.637;AC=49;AF=0.875;AN=56;BaseQRankSum=-5.423;DP=485;FS=5.718;HRun=9;HaplotypeScore=80.6498;InbreedingCoeff=0.4546;MQ=84.15;MQ0=1;MQRankSum=-7.371;QD=14.96;ReadPosRankSum=1.808;VQSLOD=2.8271;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,12:19:30.06:402,30,0	1/1:2,5:7:12.49:161,12,0	0/0:20,0:20:36.57:0,37,374	0/0:27,0:27:45.86:0,46,450	1/1:6,4:16:14.37:160,14,0	1/1:2,9:11:12.04:185,12,0	1/1:4,19:25:50.01:707,50,0	0/1:13,3:19:9.54:163,0,10	1/1:3,1:13:12.02:132,12,0	1/1:9,4:15:11.99:137,12,0	1/1:5,7:14:17.15:203,17,0	0/1:3,13:16:7.73:299,0,8	1/1:3,9:13:21.80:288,22,0	1/1:2,19:23:35.48:516,35,0	1/1:9,0:19:0.47:1,0,0	1/1:4,9:17:13.08:188,13,0	1/1:8,1:21:5.99:54,6,0	1/1:5,1:16:8.97:88,9,0	1/1:12,11:27:15.02:529,15,0	1/1:6,6:14:17.50:202,18,0	1/1:5,9:19:30.54:306,31,0	1/1:6,4:11:9.03:136,9,0	0/1:4,7:12:12.08:203,0,12	1/1:12,14:29:34.58:441,35,0	1/1:2,6:8:12.04:185,12,0	1/1:7,3:19:27.97:241,28,0	1/1:4,16:22:19.63:455,20,0	1/1:3,6:10:11.91:153,12,0
chr10	29974144	.	T	TCC	2921.75	PASS	AB=0.963;AC=44;AF=0.786;AN=56;BaseQRankSum=4.682;DP=535;FS=0.000;HRun=1;HaplotypeScore=119.2216;InbreedingCoeff=0.0737;MQ=69.44;MQ0=1;MQRankSum=-2.179;QD=5.77;ReadPosRankSum=4.039;VQSLOD=-0.1811;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:34,0:34:12.15:202,12,0	1/1:8,0:8:17.19:96,17,0	0/0:14,0:8:5.57:0,6,231	0/0:15,0:14:25.33:0,25,240	0/1:18,0:18:34.47:83,0,34	1/1:20,0:20:4.67:79,5,0	1/1:16,1:17:2.82:82,3,0	1/1:25,0:25:23.27:171,23,0	0/1:23,0:23:1.83:64,0,2	1/1:26,0:26:11.73:218,12,0	1/1:18,0:18:1.89:94,2,0	1/1:14,0:14:5.77:72,6,0	1/1:12,0:12:15.64:79,16,0	0/1:9,2:11:18.33:98,0,18	0/1:19,1:20:1.56:140,0,2	1/1:18,0:18:12.97:122,13,0	0/1:26,1:27:8.54:101,0,9	0/1:25,0:25:18.37:102,0,18	1/1:29,0:29:18.17:272,18,0	1/1:21,0:21:18.06:105,18,0	1/1:15,0:15:14.45:90,14,0	0/1:15,1:16:4.37:96,0,4	1/1:11,0:11:8.36:57,8,0	1/1:26,0:26:17.58:160,18,0	1/1:27,0:27:1.66:152,2,0	1/1:17,0:17:42.20:216,42,0	0/1:20,0:20:39.51:41,0,40	1/1:8,0:8:15.83:77,16,0
chr10	29974146	.	C	CT	6959.95	PASS	AB=0.593;AC=49;AF=0.875;AN=56;BaseQRankSum=-6.893;DP=574;FS=3.035;HRun=12;HaplotypeScore=106.2948;InbreedingCoeff=0.3186;MQ=69.80;MQ0=1;MQRankSum=-1.262;QD=12.79;ReadPosRankSum=0.361;VQSLOD=4.7063;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,30:38:12.48:459,12,0	1/1:3,8:11:15.02:146,15,0	0/0:13,0:8:2.95:0,3,38	0/0:16,0:15:10.64:0,11,72	1/1:13,6:19:4.14:252,4,0	1/1:6,15:21:7.20:249,7,0	1/1:6,12:19:3.72:223,4,0	1/1:17,9:26:22.93:235,23,0	1/1:12,16:28:14.06:171,14,0	1/1:12,14:26:17.37:317,17,0	1/1:3,15:18:14.30:290,14,0	1/1:5,9:14:8.18:240,8,0	1/1:4,9:13:20.99:204,21,0	1/1:5,5:11:13.76:139,14,0	0/1:5,16:22:0.47:291,0,0	1/1:4,15:19:20.34:338,20,0	1/1:12,17:29:5.44:235,5,0	0/1:8,17:25:23.26:272,0,23	1/1:11,19:30:36.40:483,36,0	1/1:7,13:21:29.95:268,30,0	1/1:2,15:17:27.04:263,27,0	1/1:15,6:21:9.38:202,9,0	1/1:2,10:12:8.82:87,9,0	1/1:6,23:29:28.57:444,29,0	1/1:11,15:26:20.32:369,20,0	1/1:4,16:21:42.07:409,42,0	0/1:7,12:20:33.74:175,0,34	1/1:1,7:8:17.02:198,17,0
chr10	29974217	.	A	AACAC	5546.23	PASS	AB=0.971;AC=36;AF=0.692;AN=52;BaseQRankSum=-3.887;DP=491;FS=0.000;HRun=0;HaplotypeScore=130.8903;InbreedingCoeff=0.5631;MQ=68.33;MQ0=4;MQRankSum=1.085;QD=15.62;ReadPosRankSum=-1.316;VQSLOD=4.4204;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:30:26.97:347,27,0	0/0:6,0:6:3.01:0,3,46	./.	./.	0/1:15,0:15:0:0,0,0	0/0:10,0:15:14.80:0,15,139	0/1:20,2:22:5.17:200,0,5	1/1:21,0:21:8.97:101,9,0	0/0:10,0:13:12.01:0,12,112	1/1:19,0:19:24.93:343,25,0	0/1:10,0:10:20.76:55,0,21	1/1:16,2:17:14.83:299,15,0	1/1:14,1:17:23.75:288,24,0	1/1:9,0:9:5.82:113,6,0	1/1:19,1:19:26.66:478,27,0	1/1:16,4:20:33.04:586,33,0	1/1:17,0:17:24.54:450,25,0	1/1:24,0:24:28.39:398,28,0	0/0:17,0:19:6:0,6,56	0/0:13,0:16:8.99:0,9,78	0/0:25,0:26:9.43:0,9,76	1/1:16,1:18:17.78:292,18,0	1/1:10,1:13:17.11:232,17,0	1/1:25,3:28:33.05:545,33,0	1/1:8,2:10:8.80:194,9,0	0/1:14,0:14:27.14:187,0,27	1/1:18,3:22:20.80:398,21,0	1/1:6,0:6:3.01:39,3,0
chr10	29974848	.	T	TTTGTTG	19295.81	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-2.969;DP=693;FS=0.888;HRun=0;HaplotypeScore=147.6097;InbreedingCoeff=0.9504;MQ=57.04;MQ0=1;MQRankSum=-10.735;QD=35.87;ReadPosRankSum=-2.601;VQSLOD=4.3249;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:22,14:45:24.08:770,24,0	1/1:3,4:9:9.50:290,10,0	0/0:20,0:20:15.05:0,15,271	0/0:21,0:19:30.07:0,30,547	1/1:16,7:24:39.06:873,39,0	1/1:11,0:28:27.09:706,27,0	1/1:12,0:25:6.02:137,6,0	1/1:12,3:22:27.08:723,27,0	0/0:26,0:28:60.19:0,60,1116	1/1:13,20:36:66.16:1738,66,0	1/1:17,10:28:52.35:1399,52,0	1/1:16,10:26:63.17:1674,63,0	1/1:15,6:21:39.99:1017,40,0	1/1:8,9:19:21.07:680,21,0	0/0:22,0:23:51.17:0,51,1029	1/1:7,16:31:50.54:1435,51,0	0/0:47,0:47:99:0,123,2424	0/0:15,0:15:36.12:0,36,746	1/1:13,1:14:15.49:326,15,0	1/1:7,9:19:27.04:769,27,0	1/1:25,1:29:32.85:450,33,0	1/1:7,7:19:21.07:685,21,0	1/1:7,5:13:15.05:484,15,0	1/1:14,14:34:26.58:553,27,0	1/1:9,4:17:15.05:427,15,0	1/1:18,11:30:54.12:1493,54,0	1/1:15,22:39:78.11:2255,78,0	1/1:4,5:10:14.98:410,15,0
chr10	29974954	.	AG	A	9070.37	PASS	AB=0.979;AC=48;AF=0.857;AN=56;BaseQRankSum=-7.769;DP=583;FS=0.000;HRun=10;HaplotypeScore=100.4314;InbreedingCoeff=0.6994;MQ=76.47;MQ0=0;MQRankSum=-3.181;QD=17.89;ReadPosRankSum=2.081;VQSLOD=4.9123;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,34:43:68.95:599,69,0	1/1:1,6:7:15:130,15,0	0/1:11,0:12:16.29:16,0,49	0/1:21,1:22:16.46:16,0,255	1/1:6,13:19:41.98:364,42,0	1/1:4,19:23:35.95:312,36,0	1/1:4,11:16:35.03:292,35,0	1/1:3,20:22:50.93:436,51,0	1/1:3,17:20:47.98:417,48,0	1/1:4,12:16:44.95:383,45,0	1/1:6,13:19:35.37:307,35,0	1/1:2,16:18:44.99:391,45,0	1/1:3,18:21:56.99:495,57,0	1/1:3,19:22:56.02:475,56,0	0/0:9,0:20:17.60:0,18,97	1/1:3,23:26:62.97:547,63,0	0/0:11,0:35:59.98:0,60,345	0/0:5,0:20:40.11:0,40,237	1/1:1,3:5:11.04:84,11,0	1/1:4,16:20:38.98:338,39,0	1/1:8,34:43:80.02:683,80,0	1/1:1,13:14:35.99:313,36,0	1/1:2,14:16:41.99:364,42,0	1/1:2,24:26:65.99:573,66,0	1/1:1,18:19:47.99:417,48,0	1/1:6,14:20:47.98:414,48,0	1/1:6,22:28:62.96:547,63,0	1/1:1,6:7:17.99:156,18,0
chr10	29975104	.	TTG	T	4999.29	PASS	AB=0.992;AC=50;AF=0.893;AN=56;BaseQRankSum=-10.578;DP=475;FS=3.041;HRun=0;HaplotypeScore=73.6176;InbreedingCoeff=0.1579;MQ=69.51;MQ0=3;MQRankSum=1.684;QD=11.18;ReadPosRankSum=-3.374;VQSLOD=3.8444;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:14:7.44:143,7,0	0/1:8,0:8:4.86:63,0,5	0/1:30,1:15:6.81:7,0,222	0/0:28,0:16:30.56:0,31,238	1/1:24,0:24:11.10:287,11,0	1/1:20,1:21:27.73:270,28,0	1/1:15,0:15:8.61:176,9,0	1/1:29,1:29:55.51:455,56,0	1/1:7,0:7:13.81:153,14,0	1/1:19,1:19:17.40:312,17,0	1/1:18,0:18:17.92:273,18,0	1/1:11,0:11:19.83:205,20,0	1/1:16,0:16:11.63:129,12,0	1/1:14,0:13:14.34:167,14,0	1/1:21,1:22:0.44:186,0,0	1/1:13,1:14:24.54:224,25,0	1/1:14,2:16:1.45:103,1,0	1/1:16,1:17:27.95:250,28,0	1/1:14,0:14:0.63:96,1,0	1/1:24,0:24:31.05:301,31,0	1/1:4,0:4:2.96:15,3,0	1/1:9,1:10:10.65:172,11,0	0/1:17,0:16:6.74:102,0,7	1/1:14,0:14:25.18:199,25,0	0/1:14,0:13:16.96:66,0,17	1/1:17,1:18:29.63:321,30,0	1/1:29,1:30:25.46:306,25,0	1/1:4,0:4:2.97:20,3,0
chr10	29975105	.	TG	T	8017.20	PASS	AB=0.970;AC=53;AF=0.946;AN=56;BaseQRankSum=-3.596;DP=473;FS=11.250;HRun=1;HaplotypeScore=57.9701;InbreedingCoeff=0.5495;MQ=69.50;MQ0=3;MQRankSum=-0.090;QD=18.02;ReadPosRankSum=0.867;VQSLOD=3.8290;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,1:14:32.81:261,33,0	1/1:8,0:8:19.60:147,20,0	0/1:31,1:15:7.57:8,0,185	0/0:28,0:16:13.60:0,14,153	1/1:21,3:24:60:477,60,0	1/1:18,2:20:48.88:411,49,0	1/1:12,3:15:36.87:312,37,0	1/1:27,3:29:74.27:659,74,0	1/1:5,2:8:17.33:156,17,0	1/1:20,0:19:51.31:426,51,0	1/1:16,1:17:45.98:367,46,0	1/1:11,0:11:31.52:254,32,0	1/1:14,2:16:35.58:243,36,0	1/1:11,3:13:33.68:248,34,0	1/1:20,2:22:51.53:368,52,0	1/1:12,2:14:37.09:296,37,0	1/1:4,12:16:4.28:183,4,0	1/1:13,4:17:49.78:439,50,0	1/1:6,7:13:31.75:221,32,0	1/1:23,0:23:65.23:488,65,0	1/1:4,0:4:11.32:80,11,0	1/1:9,1:10:27.60:224,28,0	1/1:16,1:16:35.79:222,36,0	1/1:15,0:15:34.80:288,35,0	1/1:12,2:13:30.83:178,31,0	1/1:17,0:17:49.01:412,49,0	1/1:28,2:30:78.82:609,79,0	1/1:0,4:4:3.01:40,3,0
chr10	29975519	.	T	TA	18502.46	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-14.007;DP=707;FS=2.696;HRun=5;HaplotypeScore=66.0775;InbreedingCoeff=0.9989;MQ=84.21;MQ0=0;MQRankSum=-3.875;QD=32.46;ReadPosRankSum=3.413;VQSLOD=5.5941;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,41:48:99:1439,112,0	1/1:0,13:13:39.13:513,39,0	0/0:23,0:23:56.97:0,57,553	0/0:19,0:19:42.10:0,42,445	1/1:1,30:31:87.28:1142,87,0	1/1:2,28:30:75.24:987,75,0	1/1:1,18:19:45.15:592,45,0	1/1:8,28:36:84.25:1076,84,0	0/0:14,0:14:39.09:0,39,412	1/1:1,23:24:69.20:880,69,0	1/1:1,24:25:66.21:868,66,0	1/1:2,15:17:39.13:513,39,0	1/1:1,15:16:32.95:434,33,0	1/1:0,20:20:51.17:667,51,0	0/0:29,0:29:75.15:0,75,783	1/1:2,20:22:54.18:710,54,0	0/0:41,0:41:99:0,114,1196	0/0:11,0:11:27.07:0,27,290	1/1:1,24:26:75.20:944,75,0	1/1:4,27:31:78.19:1004,78,0	1/1:0,28:28:78.25:1026,78,0	1/1:2,21:23:60.11:767,60,0	1/1:4,38:42:99:1342,102,0	1/1:2,20:22:57.19:750,57,0	1/1:1,20:21:51.17:671,51,0	1/1:7,27:34:81.24:1037,81,0	1/1:5,29:34:64.07:861,64,0	1/1:0,8:8:21.07:276,21,0
chr10	29976099	.	T	TGC	429.30	PASS	AB=0.996;AC=9;AF=0.161;AN=56;BaseQRankSum=13.381;DP=720;FS=4.247;HRun=0;HaplotypeScore=152.5689;InbreedingCoeff=-0.0215;MQ=63.28;MQ0=10;MQRankSum=-1.927;QD=1.81;ReadPosRankSum=0.340;VQSLOD=2.2919;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:49,0:47:0.49:0,0,304	0/0:16,0:16:8.86:0,9,144	0/0:21,0:13:38.79:0,39,368	0/0:24,0:17:47.94:0,48,449	0/1:27,0:27:0.83:1,0,204	0/1:24,0:24:23.65:24,0,72	0/0:26,0:26:29.29:0,29,331	0/0:32,0:32:66.98:0,67,700	1/1:6,17:23:1.74:371,2,0	0/0:27,0:27:38.64:0,39,485	0/0:19,0:19:28.43:0,28,247	0/1:23,0:23:18.71:19,0,187	0/0:27,0:27:18.44:0,18,214	0/0:25,0:25:1.44:0,1,172	0/0:32,0:32:69.64:0,70,799	0/1:38,1:39:86.57:87,0,203	0/0:27,0:27:69.28:0,69,812	0/0:23,0:22:61.53:0,62,657	0/0:14,0:14:24.61:0,25,234	0/0:15,0:14:18.08:0,18,170	0/0:46,0:44:43.23:0,43,523	0/1:24,0:23:21.12:21,0,135	0/0:19,0:19:24.64:0,25,247	0/0:37,0:37:27.51:0,28,311	0/0:17,0:17:9.50:0,10,132	0/0:26,0:26:21.81:0,22,397	0/1:28,0:26:30.18:30,0,145	0/0:10,0:10:2.07:0,2,76
chr10	29976136	.	G	GTGTT	12273.11	PASS	AB=0.882;AC=46;AF=0.821;AN=56;BaseQRankSum=-3.964;DP=756;FS=1.425;HRun=0;HaplotypeScore=140.8392;InbreedingCoeff=0.3991;MQ=61.27;MQ0=6;MQRankSum=-1.712;QD=18.13;ReadPosRankSum=-1.304;VQSLOD=4.4030;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,43:56:34.49:842,34,0	1/1:0,13:13:17.96:372,18,0	0/0:29,0:20:41.21:0,41,446	0/0:22,0:16:37.52:0,38,398	1/1:5,3:25:31.59:305,32,0	1/1:4,25:34:30.06:708,30,0	1/1:4,22:31:0.51:219,1,0	1/1:29,0:29:83.93:756,84,0	0/0:28,0:28:65.35:0,65,530	1/1:4,24:35:65.19:793,65,0	1/1:5,17:24:0.94:197,1,0	1/1:7,16:25:12.02:185,12,0	1/1:4,25:32:21.05:459,21,0	1/1:1,24:31:21.07:520,21,0	0/1:24,0:25:99:226,0,171	1/1:3,20:30:24.89:722,25,0	0/1:30,0:30:99:283,0,193	0/1:26,0:26:99:221,0,121	1/1:3,1:14:38.93:416,39,0	1/1:1,11:13:25.09:235,25,0	0/1:9,25:36:6.31:686,0,6	1/1:7,19:27:22.96:787,23,0	1/1:3,13:18:1.35:163,1,0	1/1:4,33:44:32.92:703,33,0	1/1:1,11:15:15.03:358,15,0	1/1:3,23:27:72.41:1058,72,0	1/1:3,22:24:42.12:951,42,0	1/1:0,1:4:6:106,6,0
chr10	29978002	.	A	ATT	6637.63	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=4.054;DP=618;FS=5.621;HRun=7;HaplotypeScore=113.3019;InbreedingCoeff=0.9870;MQ=75.26;MQ0=0;MQRankSum=-6.896;QD=11.71;ReadPosRankSum=2.486;VQSLOD=1.4877;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:16:28.16:102,28,0	1/1:2,0:10:19.96:70,20,0	0/0:16,0:16:42.06:0,42,472	0/0:15,0:15:33.51:0,34,377	1/1:4,0:39:86.14:332,86,0	1/1:6,0:30:54.90:193,55,0	1/1:1,0:19:39.80:140,40,0	1/1:3,0:33:73.04:326,73,0	0/0:20,0:20:51.13:0,51,594	1/1:2,0:35:82.60:295,83,0	1/1:0,1:21:42.94:190,43,0	1/1:2,0:21:42.42:150,42,0	1/1:1,0:24:49.91:176,50,0	1/1:1,0:20:44.92:158,45,0	1/1:3,15:18:39.13:640,39,0	1/1:1,0:23:52.90:200,53,0	1/1:3,29:32:78.27:1280,78,0	1/1:1,18:19:48.16:788,48,0	1/1:3,0:23:52.65:188,53,0	1/1:2,0:30:67.85:249,68,0	1/1:2,0:6:12.35:43,12,0	1/1:2,0:15:29.17:111,29,0	1/1:3,0:25:47.41:167,47,0	1/1:0,0:19:39.93:141,40,0	1/1:3,0:22:44.92:158,45,0	1/1:0,0:30:75.36:279,75,0	1/1:4,0:25:46.99:166,47,0	1/1:0,0:11:27.45:97,27,0
chr10	29978851	.	GT	G	10607.25	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=7.638;DP=538;FS=10.257;HRun=8;HaplotypeScore=56.0394;InbreedingCoeff=0.9866;MQ=70.76;MQ0=0;MQRankSum=-0.484;QD=24.00;ReadPosRankSum=2.491;VQSLOD=5.2823;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,45:48:99:1072,111,0	1/1:0,7:7:21.03:203,21,0	0/0:9,0:8:12.04:0,12,144	0/0:13,0:13:17.61:0,18,177	1/1:2,28:30:84.12:805,84,0	1/1:0,13:13:39.06:377,39,0	1/1:4,6:10:15.02:145,15,0	1/1:2,23:25:66.05:632,66,0	0/0:22,0:22:63.19:0,63,760	1/1:1,23:24:69.08:658,69,0	1/1:1,21:22:60.09:579,60,0	1/1:4,16:20:45.07:434,45,0	1/1:1,17:18:42.07:406,42,0	1/1:1,18:19:51.08:493,51,0	0/0:12,0:12:36.11:0,36,435	1/1:1,20:21:48.08:464,48,0	0/0:18,0:18:48.13:0,48,568	0/0:22,0:22:54.15:0,54,634	1/1:1,17:18:51.08:492,51,0	1/1:1,23:24:66.10:636,66,0	1/1:0,13:13:33.05:319,33,0	1/1:1,11:12:30.04:288,30,0	1/1:1,21:22:57.09:550,57,0	1/1:2,11:13:27.04:261,27,0	1/1:3,17:20:39.06:377,39,0	1/1:4,26:30:78.12:753,78,0	1/1:3,19:22:48.07:464,48,0	1/1:0,11:11:21.03:203,21,0
chr10	29979890	.	TG	T	10880.86	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=5.471;DP=555;FS=10.929;HRun=7;HaplotypeScore=83.8949;InbreedingCoeff=0.9959;MQ=80.75;MQ0=0;MQRankSum=-4.116;QD=25.54;ReadPosRankSum=2.330;VQSLOD=4.9844;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,33:34:96.22:979,96,0	1/1:0,11:11:30.07:306,30,0	0/0:18,0:17:39.11:0,39,451	0/0:19,0:20:16.65:0,17,383	1/1:3,23:26:57.12:581,57,0	1/1:1,10:11:27.06:275,27,0	1/1:0,23:23:69.16:704,69,0	1/1:6,18:24:51.07:506,51,0	0/0:11,0:11:30.10:0,30,375	1/1:4,15:19:39.08:398,39,0	1/1:3,17:20:45.10:459,45,0	1/1:0,15:15:33.07:337,33,0	1/1:1,21:22:60.12:612,60,0	1/1:0,18:18:54.12:551,54,0	0/0:19,0:19:48.14:0,48,591	1/1:1,8:8:24.05:245,24,0	0/0:40,0:40:99:0,105,1318	0/0:21,0:21:60.18:0,60,743	1/1:0,7:7:21.05:214,21,0	1/1:4,20:24:51.11:520,51,0	1/1:2,21:23:60.13:612,60,0	1/1:2,18:20:51.12:520,51,0	1/1:3,21:24:57.12:582,57,0	1/1:4,19:23:54.12:551,54,0	1/1:1,18:19:48.11:490,48,0	1/1:3,20:23:60.13:612,60,0	1/1:3,18:21:51.12:520,51,0	1/1:0,10:10:30.07:306,30,0
chr10	29980234	.	TTGTGTGTGTGTG	T	5160.80	PASS	AB=0.741;AC=40;AF=0.741;AN=54;BaseQRankSum=5.438;DP=588;FS=28.635;HRun=0;HaplotypeScore=204.3934;InbreedingCoeff=0.2864;MQ=56.36;MQ0=12;MQRankSum=-4.131;QD=11.47;ReadPosRankSum=0.814;VQSLOD=2.4444;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:18:0.47:1,0,0	0/0:9,0:10:5.98:0,6,64	./.	0/0:25,0:16:3.01:0,3,42	0/0:20,0:28:23.57:0,24,452	1/1:8,6:13:3.01:103,3,0	1/1:11,1:15:3.01:84,3,0	0/0:21,0:23:5.44:0,5,39	1/1:7,0:17:14.96:419,15,0	0/0:28,0:28:1.17:0,1,44	0/1:6,1:12:17.95:38,0,18	1/1:23,1:26:18.06:474,18,0	1/1:8,6:14:11.95:400,12,0	1/1:20,8:27:5.77:205,6,0	1/1:11,0:20:14.79:418,15,0	0/1:11,0:20:14.05:80,0,14	0/1:15,0:22:36.10:239,0,36	1/1:16,0:24:8.78:251,9,0	1/1:25,0:26:2.75:83,3,0	0/1:14,2:17:8.92:372,0,9	1/1:34,0:34:9.01:141,9,0	1/1:18,5:23:3.01:103,3,0	1/1:11,10:21:6.02:205,6,0	1/1:22,3:25:18.49:436,18,0	1/1:11,4:16:3.01:84,3,0	1/1:18,0:17:9.02:165,9,0	1/1:18,9:29:20.29:699,20,0	1/1:2,1:4:6.02:163,6,0
chr10	29981149	.	T	TAC	1755.07	PASS	AC=44;AF=0.917;AN=48;BaseQRankSum=-3.558;DP=629;FS=0.000;HRun=0;HaplotypeScore=135.2242;InbreedingCoeff=0.3711;MQ=51.99;MQ0=16;MQRankSum=1.970;QD=3.49;ReadPosRankSum=-0.047;VQSLOD=2.6354;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:43,0:42:14.97:133,15,0	1/1:7,0:7:5.89:39,6,0	./.	./.	1/1:17,1:18:6.81:125,7,0	1/1:26,0:25:14.99:139,15,0	1/1:32,0:32:8.85:62,9,0	./.	1/1:27,0:27:8.97:71,9,0	1/1:23,0:23:22.57:172,23,0	1/1:17,0:17:8.65:57,9,0	1/1:32,0:32:5.89:40,6,0	1/1:14,0:20:3:37,3,0	1/1:24,1:25:8.68:74,9,0	0/0:30,0:29:2.84:0,3,14	1/1:17,1:17:6.01:67,6,0	./.	0/0:22,0:22:8.52:0,9,42	1/1:20,0:18:11.92:102,12,0	1/1:13,0:13:2.99:23,3,0	1/1:43,1:44:23.94:192,24,0	1/1:16,0:16:5.92:41,6,0	1/1:24,0:23:20.94:166,21,0	1/1:20,7:26:3.01:40,3,0	1/1:11,7:18:3.01:40,3,0	1/1:25,0:24:13.33:91,13,0	1/1:13,1:15:12.04:85,12,0	1/1:11,0:11:8.95:67,9,0
chr10	29981185	.	CACACACACACACAGAG	C	6151.75	PASS	AB=1.000;AC=26;AF=0.464;AN=56;BaseQRankSum=-6.992;DP=711;FS=8.778;HRun=0;HaplotypeScore=237.9524;InbreedingCoeff=-0.6036;MQ=49.86;MQ0=31;MQRankSum=4.638;QD=10.20;ReadPosRankSum=-5.891;VQSLOD=0.6851;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:36,0:34:99:322,0,1090	0/1:8,0:8:29.17:29,0,691	0/0:35,0:9:26.63:0,27,394	0/0:37,0:11:28.62:0,29,545	0/1:27,0:24:99:219,0,1060	0/1:25,0:24:99:249,0,843	0/1:40,0:40:99:504,0,1217	0/1:25,0:23:99:383,0,409	0/1:26,0:26:99:222,0,1471	0/1:21,0:20:99:178,0,1645	0/1:13,0:13:75.10:75,0,466	0/1:28,0:28:99:315,0,807	0/1:24,0:24:99:337,0,239	0/1:28,0:28:99:192,0,750	1/1:4,27:31:15.52:393,16,0	0/1:18,0:18:99:164,0,673	0/0:6,20:24:1.72:0,2,5	1/1:3,20:23:15.01:542,15,0	0/1:15,0:12:99:107,0,540	0/1:14,0:14:99:124,0,277	0/1:53,0:53:99:641,0,1872	0/1:25,0:24:99:306,0,648	0/1:24,0:23:62.16:62,0,1292	0/1:29,0:27:99:219,0,367	0/1:23,0:23:99:255,0,231	0/1:31,0:31:99:288,0,1791	0/1:16,0:15:23.59:24,0,661	0/0:10,0:10:24.08:0,24,1150
chr10	29981197	.	CAGAG	C	11117.92	PASS	AB=1.000;AC=43;AF=0.768;AN=56;BaseQRankSum=-7.207;DP=709;FS=38.262;HRun=0;HaplotypeScore=139.9180;InbreedingCoeff=0.3462;MQ=60.49;MQ0=20;MQRankSum=-2.471;QD=18.02;ReadPosRankSum=5.952;VQSLOD=2.6753;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:34,0:32:17.93:518,0,18	1/1:8,0:8:0.37:88,0,0	0/0:41,0:17:50.73:0,51,820	0/0:41,0:19:48.61:0,49,837	1/1:25,0:23:10.52:428,11,0	0/1:22,0:22:2.24:330,0,2	1/1:34,0:34:57.08:847,57,0	1/1:6,21:26:63.11:972,63,0	0/1:23,0:23:0.86:392,0,1	0/1:22,0:21:25.51:398,0,26	1/1:16,0:16:8.27:316,8,0	1/1:29,0:29:46.33:686,46,0	1/1:23,0:23:47.84:667,48,0	1/1:30,0:30:11.72:450,12,0	1/1:28,0:28:15.04:177,15,0	1/1:18,0:18:7.02:323,7,0	0/1:20,0:21:0:0,0,0	1/1:21,0:21:12.51:158,13,0	1/1:15,0:14:14.83:277,15,0	0/1:13,0:13:1.58:217,0,2	1/1:57,0:57:48.44:1290,48,0	1/1:25,0:24:14.58:486,15,0	0/1:25,0:24:67.25:209,0,67	1/1:26,0:25:25.87:433,26,0	1/1:27,0:27:30.45:519,30,0	1/1:30,0:30:34.23:689,34,0	1/1:18,0:17:14.47:249,14,0	0/0:10,0:10:5.86:0,6,35
chr10	29982123	.	A	AG	1293.77	PASS	AB=0.808;AC=36;AF=0.857;AN=42;BaseQRankSum=-2.231;DP=67;FS=7.179;HRun=5;HaplotypeScore=15.1124;InbreedingCoeff=0.2175;MQ=94.61;MQ0=0;MQRankSum=-3.528;QD=23.10;ReadPosRankSum=3.474;VQSLOD=1.4642;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,4:5:9.03:110,9,0	./.	0/0:4,0:3:9.47:0,9,88	0/0:6,0:6:11.97:0,12,105	./.	./.	1/1:1,4:5:9.03:109,9,0	1/1:0,1:1:3.01:39,3,0	1/1:0,3:3:9.03:103,9,0	1/1:0,1:1:3.01:39,3,0	./.	1/1:0,3:3:9.03:118,9,0	1/1:0,4:4:6.02:79,6,0	1/1:0,1:1:3.01:34,3,0	1/1:0,3:3:6.02:79,6,0	1/1:0,1:1:3.01:39,3,0	0/1:3,5:8:1.67:179,0,2	1/1:0,1:1:3.01:39,3,0	0/1:2,0:2:16.47:33,0,16	1/1:0,1:1:3.01:39,3,0	1/1:2,3:5:6.02:79,6,0	1/1:1,1:2:3.01:35,3,0	./.	1/1:2,0:2:6.02:78,6,0	./.	1/1:1,0:1:3:27,3,0	./.	1/1:3,4:7:12.03:153,12,0
chr10	29982408	.	T	TTATTA	1244.95	PASS	AB=0.882;AC=17;AF=0.327;AN=52;BaseQRankSum=9.027;DP=232;FS=4.502;HRun=0;HaplotypeScore=56.5661;InbreedingCoeff=-0.5455;MQ=84.20;MQ0=1;MQRankSum=-2.668;QD=6.77;ReadPosRankSum=-1.882;VQSLOD=1.2590;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:12,0:15:99:130,0,375	0/0:2,0:2:6.02:0,6,83	0/0:7,0:7:21.06:0,21,273	0/1:8,0:8:9:9,0,186	0/1:2,0:3:7.32:7,0,34	0/1:1,0:3:14.58:15,0,33	0/1:4,0:7:5.57:6,0,147	0/1:31,0:30:99:123,0,729	0/0:5,0:6:18.06:0,18,254	0/1:2,1:4:30.79:102,0,31	./.	0/0:9,0:11:3.46:0,3,249	0/0:3,0:6:0.24:0,0,113	0/1:6,0:6:91.35:91,0,148	0/1:14,0:14:29.39:29,0,414	0/1:6,0:6:69.04:69,0,112	0/1:32,0:32:99:107,0,543	0/1:18,0:18:50.57:51,0,383	0/1:9,0:8:76.79:77,0,223	./.	0/0:5,0:5:11.36:0,11,164	0/0:3,0:3:6.02:0,6,83	0/0:2,0:2:6.02:0,6,108	0/0:6,0:6:1.21:0,1,190	0/1:3,0:5:14.53:15,0,70	0/1:4,0:4:49.33:117,0,49	0/1:5,0:5:21.63:22,0,151	0/1:9,1:14:99:418,0,168
chr10	29982452	.	T	TA	298.74	PASS	AB=0.810;AC=3;AF=0.054;AN=56;BaseQRankSum=6.027;DP=224;FS=2.944;HRun=0;HaplotypeScore=32.3282;InbreedingCoeff=-0.1100;MQ=79.24;MQ0=0;MQRankSum=0.138;QD=5.15;ReadPosRankSum=2.289;VQSLOD=2.6363;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:6:11.73:0,12,116	0/0:2,0:2:6.02:0,6,83	0/0:10,0:9:27.04:0,27,334	0/0:7,0:6:15.03:0,15,191	0/0:9,0:9:24.04:0,24,303	0/0:5,0:5:6.95:0,7,67	0/0:5,0:5:6.96:0,7,85	0/0:21,0:21:63.21:0,63,873	0/0:5,0:5:15.01:0,15,172	0/0:7,0:7:18.05:0,18,234	0/0:2,0:2:6.02:0,6,83	0/0:10,0:10:19:0,19,251	0/0:8,0:8:9.50:0,10,126	0/0:8,0:8:20.52:0,21,212	0/1:7,1:8:57.03:65,0,57	0/0:4,0:4:8.90:0,9,99	0/1:19,9:28:99:242,0,106	0/1:16,6:22:90.66:91,0,132	0/0:8,0:8:24.08:0,24,334	0/0:4,0:4:12.04:0,12,167	0/0:2,0:2:6.02:0,6,83	0/0:3,0:3:9.02:0,9,111	0/0:2,0:2:6.02:0,6,84	0/0:2,0:2:3.48:0,3,42	0/0:6,0:6:12.98:0,13,154	0/0:5,0:5:12:0,12,132	0/0:10,0:10:0.99:0,1,347	0/0:15,0:15:31.99:0,32,420
chr10	29982453	.	T	TTA	599.35	PASS	AB=0.811;AC=3;AF=0.054;AN=56;BaseQRankSum=4.706;DP=228;FS=1.673;HRun=0;HaplotypeScore=36.5412;InbreedingCoeff=-0.0887;MQ=78.85;MQ0=0;MQRankSum=2.000;QD=10.33;ReadPosRankSum=0.237;VQSLOD=2.9449;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:6:10.84:0,11,115	0/0:2,0:2:6.02:0,6,95	0/0:10,0:9:26.99:0,27,358	0/0:7,0:6:15.03:0,15,219	0/0:9,0:9:26.99:0,27,385	0/0:5,0:5:14.76:0,15,130	0/0:5,0:5:11.84:0,12,130	0/0:21,0:21:63.18:0,63,997	0/0:5,0:5:15.04:0,15,219	0/0:7,0:7:20.74:0,21,295	0/0:2,0:2:6.02:0,6,97	0/0:10,0:10:29.80:0,30,374	0/0:8,0:8:17.89:0,18,208	0/0:8,0:8:23.91:0,24,260	0/1:7,1:8:29.43:115,0,29	0/0:4,0:4:12.02:0,12,152	0/1:18,9:27:99:375,0,99	0/1:17,6:23:99:208,0,113	0/0:11,0:11:24.08:0,24,391	0/0:4,0:4:12.04:0,12,194	0/0:2,0:2:6.02:0,6,96	0/0:3,0:3:9.02:0,9,125	0/0:2,0:2:6.02:0,6,98	0/0:2,0:2:5.89:0,6,64	0/0:6,0:6:17.84:0,18,207	0/0:6,0:6:12.01:0,12,148	0/0:10,0:10:20.77:0,21,428	0/0:15,0:15:40.63:0,41,531
chr10	29983043	.	CT	C	1590.47	PASS	AB=0.909;AC=9;AF=0.161;AN=56;BaseQRankSum=10.220;DP=596;FS=0.447;HRun=11;HaplotypeScore=81.4767;InbreedingCoeff=0.8423;MQ=78.00;MQ0=0;MQRankSum=1.226;QD=16.40;ReadPosRankSum=4.875;VQSLOD=4.3195;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,3:32:31.58:0,32,688	0/0:11,0:11:30.06:0,30,313	0/0:14,0:14:8.04:0,8,167	0/0:13,2:15:2.36:0,2,122	0/0:9,0:29:44.34:0,44,281	0/0:23,0:23:49.64:0,50,494	0/0:16,0:17:40.67:0,41,392	0/0:23,0:23:38.78:0,39,472	1/1:4,18:22:47.94:394,48,0	0/0:26,0:28:66.15:0,66,695	0/0:14,0:16:47.89:0,48,467	0/0:14,0:16:41.87:0,42,403	0/0:20,0:20:48.06:0,48,468	0/0:20,0:22:49.03:0,49,463	1/1:4,15:19:44.93:369,45,0	0/0:27,0:27:70.03:0,70,717	1/1:4,17:21:47.92:394,48,0	1/1:1,24:25:71.92:591,72,0	0/0:24,0:24:48.10:0,48,498	0/0:25,0:25:51.95:0,52,508	0/0:28,2:31:15.05:0,15,522	0/0:19,0:19:48.06:0,48,471	0/0:15,0:15:30.03:0,30,300	0/0:25,0:27:53.95:0,54,544	0/0:19,0:20:50.94:0,51,513	0/0:21,2:23:7.79:0,8,462	0/0:18,0:21:44.73:0,45,419	0/1:9,1:10:0.60:1,0,192
chr10	29984251	.	AT	A	1613.25	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=6.904;DP=587;FS=0.000;HRun=7;HaplotypeScore=76.4005;InbreedingCoeff=0.9971;MQ=88.22;MQ0=0;MQRankSum=-3.020;QD=21.23;ReadPosRankSum=1.267;VQSLOD=3.2400;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:78.14:0,78,916	0/0:7,0:7:18.06:0,18,227	0/0:28,0:28:57.15:0,57,697	0/0:21,0:21:51.15:0,51,619	0/0:27,0:27:69.18:0,69,849	0/0:21,0:21:54.13:0,54,661	0/0:17,0:17:48.14:0,48,591	0/0:23,0:23:60.19:0,60,753	1/1:2,17:19:48.11:489,48,0	0/0:22,0:22:57.18:0,57,709	0/0:20,0:20:54.16:0,54,667	0/0:23,0:23:57.10:0,57,681	0/0:15,0:15:30.10:0,30,376	0/0:21,0:21:45.10:0,45,547	1/1:4,16:20:45.10:459,45,0	0/0:26,0:26:63.20:0,63,792	1/1:1,18:19:42.09:428,42,0	1/1:1,17:18:39.09:398,39,0	0/0:19,0:19:51.16:0,51,659	0/0:15,0:15:33.11:0,33,415	0/0:25,0:25:57.18:0,57,716	0/0:22,0:22:48.10:0,48,574	0/0:11,0:11:27.04:0,27,318	0/0:38,0:38:87.27:0,87,1080	0/0:16,0:16:33.11:0,33,415	0/0:25,0:25:60.17:0,60,753	0/0:18,0:18:42.09:0,42,510	0/0:18,0:18:42.13:0,42,528
chr10	29984292	.	T	TACACAC	12821.45	PASS	AC=52;AF=0.963;AN=54;BaseQRankSum=-2.292;DP=663;FS=2.057;HRun=0;HaplotypeScore=181.7923;InbreedingCoeff=0.5569;MQ=61.24;MQ0=7;MQRankSum=-2.183;QD=21.73;ReadPosRankSum=0.930;VQSLOD=4.3311;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:29,4:34:32.83:628,33,0	1/1:3,2:7:6.02:135,6,0	./.	0/0:33,0:26:9.97:0,10,104	1/1:10,15:30:13.97:368,14,0	1/1:17,10:30:14.79:428,15,0	1/1:9,8:17:9.03:293,9,0	1/1:27,0:25:21.07:444,21,0	1/1:21,0:22:24.90:641,25,0	1/1:17,6:25:30.04:636,30,0	1/1:9,9:22:12.04:390,12,0	1/1:6,9:20:17.26:504,17,0	1/1:10,7:21:41.31:1133,41,0	1/1:11,11:25:21.07:623,21,0	1/1:25,0:28:36.99:862,37,0	1/1:13,10:25:27.09:815,27,0	1/1:17,0:20:20.86:449,21,0	1/1:21,0:21:29.94:427,30,0	1/1:13,1:22:36.09:649,36,0	1/1:10,0:19:5.95:77,6,0	1/1:18,1:28:9.03:116,9,0	1/1:12,8:24:17.95:408,18,0	1/1:4,5:12:17.85:506,18,0	1/1:16,8:26:15.05:351,15,0	1/1:8,13:23:24.08:719,24,0	1/1:16,10:26:40.49:815,40,0	1/1:11,8:24:15.05:368,15,0	1/1:9,0:9:3.48:37,3,0
chr10	29984708	.	GGTGA	G	16002.17	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=7.359;DP=436;FS=1.264;HRun=0;HaplotypeScore=140.8071;InbreedingCoeff=0.9541;MQ=78.62;MQ0=0;MQRankSum=-10.293;QD=41.78;ReadPosRankSum=4.684;VQSLOD=5.4439;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,24:31:69.24:1223,69,0	1/1:1,3:4:9.03:162,9,0	0/0:20,0:20:57.20:0,57,1415	0/0:22,0:21:51.17:0,51,1282	1/1:0,12:13:39.13:700,39,0	1/1:1,11:12:36.11:601,36,0	1/1:4,23:27:72.25:1291,72,0	1/1:7,8:15:27.09:482,27,0	0/0:11,0:11:24.08:0,24,624	1/1:6,11:17:42.13:722,42,0	1/1:2,9:11:30.10:522,30,0	1/1:1,8:9:24.08:431,24,0	1/1:3,10:13:33.10:550,33,0	1/1:2,9:11:27.09:485,27,0	1/1:5,18:25:57.19:1010,57,0	1/1:5,14:19:42.14:741,42,0	1/1:4,14:18:33.11:593,33,0	1/1:3,15:18:39.13:684,39,0	1/1:1,13:14:39.13:701,39,0	1/1:1,13:14:39.13:701,39,0	1/1:0,4:4:8.57:161,9,0	1/1:4,12:16:36.12:630,36,0	1/1:4,9:13:27.09:485,27,0	1/1:5,15:20:42.62:755,43,0	1/1:5,12:17:39.13:684,39,0	1/1:5,9:13:33.10:562,33,0	1/1:3,13:16:39.13:698,39,0	1/1:4,8:12:24.08:431,24,0
chr10	29984746	.	T	TG	49.53	PASS	AB=0.979;AC=11;AF=0.196;AN=56;BaseQRankSum=7.805;DP=429;FS=14.786;HRun=5;HaplotypeScore=188.7719;InbreedingCoeff=0.1249;MQ=70.27;MQ0=0;MQRankSum=-8.231;QD=0.41;ReadPosRankSum=4.584;VQSLOD=-0.6857;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:18.87:0,19,207	0/0:9,0:9:11.24:0,11,67	0/0:26,0:25:69.04:0,69,683	0/0:15,0:15:26.26:0,26,200	0/1:15,0:15:1.05:24,0,1	0/1:14,0:14:10.38:10,0,34	0/0:23,1:24:16.75:0,17,137	0/0:19,0:19:10.56:0,11,70	0/0:8,0:8:21.05:0,21,226	0/1:11,0:11:9.53:10,0,38	1/1:13,0:13:3.42:19,3,0	0/1:11,1:12:28.12:30,0,28	0/1:17,0:17:32.78:33,0,43	0/0:12,1:13:0.19:0,0,33	0/0:21,0:21:63.16:0,63,674	0/0:12,0:12:7.68:0,8,80	0/0:21,0:21:51.13:0,51,547	0/0:17,0:17:39.08:0,39,411	0/0:11,0:11:5.91:0,6,34	1/1:12,0:12:6.34:21,6,0	0/0:6,0:6:1.97:0,2,8	0/1:12,1:13:4.97:32,0,5	0/0:10,0:10:0.99:0,1,20	0/0:16,0:16:12.22:0,12,72	0/0:17,0:17:21.85:0,22,89	0/1:15,0:15:9.73:10,0,31	0/0:21,0:21:2.35:0,2,35	0/0:9,0:9:6.49:0,6,21
chr10	29984752	.	T	TG	8753.83	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=8.236;DP=405;FS=5.629;HRun=5;HaplotypeScore=146.0613;InbreedingCoeff=0.9666;MQ=74.55;MQ0=0;MQRankSum=-8.247;QD=29.47;ReadPosRankSum=3.713;VQSLOD=2.9511;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:9,18:27:48.50:579,49,0	1/1:2,7:9:18.05:222,18,0	0/0:26,0:25:48.20:0,48,834	0/0:17,0:16:14.15:0,14,297	1/1:1,14:15:39.08:480,39,0	1/1:0,13:13:36.12:464,36,0	1/1:4,18:22:49.43:623,49,0	1/1:8,11:19:39.12:496,39,0	0/0:7,0:7:21.07:0,21,294	1/1:2,10:12:30.10:386,30,0	1/1:3,10:13:15.04:180,15,0	1/1:2,8:10:26.96:310,27,0	1/1:2,14:16:45.14:560,45,0	1/1:2,11:13:37.53:428,38,0	0/0:21,0:21:63.21:0,63,873	1/1:2,10:12:29.58:365,30,0	0/0:21,0:21:54.18:0,54,749	0/0:16,0:16:45.13:0,45,603	1/1:1,6:7:21.06:255,21,0	1/1:1,7:8:21.05:256,21,0	1/1:0,5:5:6.02:76,6,0	1/1:3,11:14:33.10:411,33,0	1/1:1,9:10:24.08:313,24,0	1/1:2,11:13:30.09:372,30,0	1/1:2,13:15:33.11:421,33,0	1/1:0,14:14:42.13:542,42,0	1/1:4,17:21:53.65:666,54,0	1/1:0,9:9:27.09:348,27,0
chr10	29985223	.	G	GGC	5495.43	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-6.291;DP=410;FS=8.352;HRun=0;HaplotypeScore=69.3492;InbreedingCoeff=0.8660;MQ=90.60;MQ0=1;MQRankSum=-3.904;QD=18.08;ReadPosRankSum=0.403;VQSLOD=3.9117;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,23:35:42.01:657,42,0	1/1:3,3:6:9.03:151,9,0	0/0:24,0:24:28.68:0,29,316	0/0:16,0:16:13.08:0,13,172	1/1:6,3:9:11.59:92,12,0	1/1:4,8:12:20.96:311,21,0	1/1:4,12:16:30.10:493,30,0	1/1:8,1:9:17.27:183,17,0	0/0:19,0:18:47.99:0,48,418	1/1:6,5:11:14.91:165,15,0	1/1:10,1:11:26.97:289,27,0	1/1:1,7:9:14.08:207,14,0	1/1:8,5:13:14.73:180,15,0	1/1:8,1:9:5.91:66,6,0	0/0:16,0:16:18.79:0,19,116	1/1:3,7:11:20.77:281,21,0	0/0:13,0:13:8.20:0,8,59	0/0:18,0:18:4.41:0,4,95	1/1:11,6:17:26.87:325,27,0	1/1:11,1:12:8.89:103,9,0	1/1:4,12:16:15.52:251,16,0	1/1:3,12:16:20.17:266,20,0	1/1:2,9:11:18.06:296,18,0	1/1:7,10:17:13.15:165,13,0	1/1:6,14:20:24.08:401,24,0	1/1:12,0:12:14.39:137,14,0	1/1:23,0:22:26.83:337,27,0	1/1:9,0:9:12.03:138,12,0
chr10	29985229	.	C	CGCG	3620.68	PASS	AB=0.950;AC=33;AF=0.589;AN=56;BaseQRankSum=-3.901;DP=444;FS=0.000;HRun=0;HaplotypeScore=116.5964;InbreedingCoeff=0.0417;MQ=81.73;MQ0=1;MQRankSum=-3.710;QD=10.20;ReadPosRankSum=2.099;VQSLOD=3.3656;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:35,0:35:41.42:334,41,0	0/1:7,0:7:12.49:66,0,12	0/0:19,0:20:7.68:0,8,431	0/0:12,0:12:16.17:0,16,229	0/1:10,0:10:10.25:48,0,10	1/1:13,0:12:20.56:158,21,0	0/1:17,0:17:31.56:235,0,32	1/1:8,0:8:16.95:153,17,0	0/0:4,0:20:47.24:0,47,514	0/1:15,0:15:28.32:89,0,28	0/1:15,0:15:14.78:208,0,15	0/1:15,0:16:8.33:89,0,8	0/1:15,0:15:7.36:79,0,7	0/1:8,0:8:12.94:45,0,13	0/1:15,0:20:67.24:170,0,67	1/1:16,0:16:1.43:147,1,0	0/0:6,0:13:7.73:0,8,67	0/0:2,0:23:19.83:0,20,101	0/1:13,0:13:14.36:138,0,14	1/1:6,5:13:8.50:73,9,0	0/1:19,1:20:23.82:116,0,24	0/1:18,0:18:3.09:110,0,3	1/1:13,0:13:17.97:149,18,0	1/1:18,0:18:12.64:85,13,0	1/1:17,0:17:6.88:184,7,0	1/1:6,6:12:17.36:243,17,0	0/1:8,13:23:0.08:437,0,0	1/1:4,6:12:12.04:266,12,0
chr10	29986809	.	CAT	C	27405.66	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=5.185;DP=728;FS=2.173;HRun=0;HaplotypeScore=130.9360;InbreedingCoeff=0.9992;MQ=80.70;MQ0=2;MQRankSum=-8.394;QD=41.65;ReadPosRankSum=4.810;VQSLOD=6.4943;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,46:46:99:1883,123,0	1/1:0,19:19:54.18:826,54,0	0/0:24,0:24:69.24:0,69,1307	0/0:15,0:15:39.13:0,39,693	1/1:1,22:23:66.14:981,66,0	1/1:0,20:20:57.19:872,57,0	1/1:1,26:27:75.25:1142,75,0	1/1:1,28:29:84.27:1261,84,0	0/0:31,0:31:93.30:0,93,1753	1/1:2,23:25:69.23:1055,69,0	1/1:0,17:18:51.09:742,51,0	1/1:0,31:30:81.28:1240,81,0	1/1:0,27:27:78.26:1192,78,0	1/1:1,29:30:84.29:1283,84,0	1/1:0,36:36:96.33:1469,96,0	1/1:1,36:36:90.31:1378,90,0	1/1:0,30:30:87.30:1332,87,0	1/1:0,28:28:81.28:1240,81,0	1/1:0,17:17:48.16:735,48,0	1/1:1,26:27:66.22:1010,66,0	1/1:1,26:27:66.22:1010,66,0	1/1:0,34:34:87.30:1332,87,0	1/1:0,20:20:54.18:826,54,0	1/1:0,18:18:51.17:780,51,0	1/1:0,24:24:66.22:1010,66,0	1/1:0,27:27:78.25:1175,78,0	1/1:0,30:30:87.21:1293,87,0	1/1:0,8:8:24:338,24,0
chr10	29988340	.	CGTGTGT	C	2433.24	PASS	AC=24;AF=0.706;AN=34;BaseQRankSum=0.256;DP=368;FS=15.980;HRun=0;HaplotypeScore=107.0140;InbreedingCoeff=0.7409;MQ=33.41;MQ0=76;MQRankSum=-2.422;QD=16.11;ReadPosRankSum=3.109;VQSLOD=1.7169;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	1/1:1,4:5:9.03:184,9,0	./.	./.	./.	1/1:3,12:17:9.03:172,9,0	1/1:3,6:11:6.02:123,6,0	./.	0/0:18,0:16:24.08:0,24,715	1/1:10,5:11:15.05:307,15,0	./.	1/1:3,11:17:5.58:122,6,0	1/1:4,7:9:12.04:244,12,0	1/1:3,6:9:5.87:117,6,0	0/0:13,0:20:12.97:0,13,134	1/1:2,5:6:15.05:279,15,0	0/0:8,0:8:9.50:0,10,223	0/0:5,0:6:18.06:0,18,433	1/1:17,1:11:6.02:104,6,0	./.	0/0:7,1:5:0:0,0,0	./.	./.	./.	./.	1/1:7,6:12:24.08:491,24,0	1/1:7,5:11:11.99:241,12,0	1/1:3,2:6:9.03:184,9,0
chr10	29988346	.	T	TC	238.09	PASS	AB=0.982;AC=13;AF=0.283;AN=46;BaseQRankSum=3.980;DP=368;FS=22.597;HRun=0;HaplotypeScore=104.2705;InbreedingCoeff=0.2100;MQ=33.65;MQ0=72;MQRankSum=-2.070;QD=1.83;ReadPosRankSum=0.075;VQSLOD=0.7548;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:8:3.01:0,3,34	0/1:4,0:4:1.16:1,0,4	0/0:28,0:3:3.48:0,3,42	0/0:34,0:6:12.04:0,12,161	./.	1/1:17,0:17:8.18:58,8,0	0/1:15,0:13:1.50:2,0,2	0/1:24,0:14:22.72:23,0,323	0/0:20,0:18:33.08:0,33,422	0/1:16,0:12:4.57:5,0,173	./.	0/0:16,0:16:4.01:0,4,12	0/1:12,0:10:36.41:44,0,36	1/1:9,1:10:8.03:65,8,0	0/0:23,0:21:4.31:0,4,104	1/1:7,0:5:13.85:82,14,0	0/0:9,0:8:12.47:0,12,129	0/0:9,0:7:20.90:0,21,205	0/0:17,0:9:20.44:0,20,258	./.	0/0:9,0:5:0.47:0,0,1	./.	0/0:7,0:4:0:0,0,0	0/0:10,0:10:3.01:0,3,41	./.	0/1:12,2:12:50.66:51,0,65	0/1:11,0:10:4.30:39,0,4	0/0:8,0:7:1.65:0,2,45
chr10	29988647	.	T	TGCGCGCGC	7851.38	PASS	AB=0.951;AC=37;AF=0.771;AN=48;BaseQRankSum=-1.215;DP=646;FS=3.322;HRun=0;HaplotypeScore=180.1000;InbreedingCoeff=0.2549;MQ=50.49;MQ0=4;MQRankSum=-4.292;QD=14.02;ReadPosRankSum=-0.620;VQSLOD=3.8826;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:22,1:24:0.80:3,1,0	1/1:0,3:4:3.01:58,3,0	0/0:14,0:9:18.06:0,18,399	0/0:25,0:18:29.29:0,29,850	./.	0/1:16,1:17:0:0,0,0	1/1:48,4:52:1.81:128,2,0	1/1:35,0:32:63.19:1169,63,0	0/1:29,0:29:21.75:22,0,549	1/1:27,0:27:57.12:1512,57,0	./.	1/1:28,3:33:17.07:476,17,0	1/1:21,2:24:12.04:341,12,0	1/1:30,1:31:11.14:449,11,0	0/1:29,0:31:31.85:35,0,32	1/1:20,1:21:21.07:606,21,0	0/1:32,0:35:43.11:45,0,43	0/1:28,0:34:27:27,0,58	1/1:18,10:30:59.54:1144,60,0	1/1:14,1:15:2.67:113,3,0	1/1:32,0:30:2.96:19,3,0	./.	0/1:11,0:11:0:0,0,0	0/1:34,0:34:0.31:0,0,0	./.	1/1:18,1:18:32.85:843,33,0	1/1:21,0:21:21.54:765,22,0	1/1:1,0:1:3.01:96,3,0
chr10	29988652	.	G	GCGCGCGCGCA	10186.06	PASS	AB=0.547;AC=37;AF=0.685;AN=54;BaseQRankSum=-3.788;DP=750;FS=0.617;HRun=0;HaplotypeScore=183.0278;InbreedingCoeff=0.3035;MQ=49.61;MQ0=7;MQRankSum=-4.413;QD=15.46;ReadPosRankSum=1.457;VQSLOD=3.2204;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:9,12:32:2.61:0,3,23	1/1:4,0:4:3.01:58,3,0	0/0:14,0:7:18.06:0,18,399	0/0:26,0:16:32.29:0,32,882	0/1:1,6:12:0:1,0,0	0/1:6,8:19:0:1,0,0	1/1:18,26:57:2.02:94,2,0	1/1:34,0:31:46.46:1242,46,0	0/1:10,0:34:2.42:2,0,550	1/1:2,19:27:69.15:2112,69,0	0/1:0,4:7:0:0,0,0	1/1:8,20:43:17.15:701,17,0	1/1:5,12:26:12.04:397,12,0	1/1:5,25:50:14.77:572,15,0	0/1:5,0:36:81.73:82,0,93	0/1:5,14:30:11.60:795,0,12	0/1:9,0:36:99:134,0,116	0/1:7,0:41:95.94:96,0,168	1/1:26,0:26:62.96:1322,63,0	1/1:5,7:18:5.98:180,6,0	1/1:16,17:45:17.94:143,18,0	0/1:2,6:14:0:0,0,0	0/1:1,4:9:0:0,0,0	0/1:7,21:39:0.23:0,0,1	./.	1/1:3,13:21:44.36:1072,44,0	1/1:0,20:25:22.01:1073,22,0	1/1:2,0:1:3.01:109,3,0
chr10	29990096	.	A	AC	8628.30	PASS	AB=0.639;AC=44;AF=0.786;AN=56;BaseQRankSum=-7.067;DP=591;FS=7.079;HRun=9;HaplotypeScore=70.0315;InbreedingCoeff=0.1433;MQ=77.27;MQ0=1;MQRankSum=-4.261;QD=15.49;ReadPosRankSum=2.860;VQSLOD=4.9578;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:27,7:34:45.88:529,46,0	1/1:2,8:10:18.05:199,18,0	0/1:24,0:25:51.69:52,0,205	0/0:16,0:15:18.80:0,19,196	1/1:6,13:19:14.44:276,14,0	1/1:4,19:23:48.13:525,48,0	1/1:9,25:34:34.14:605,34,0	0/1:14,6:20:13.19:74,0,13	0/0:18,0:18:44.95:0,45,387	1/1:7,16:23:19.17:428,19,0	1/1:2,12:14:4.03:272,4,0	1/1:8,15:23:33.09:365,33,0	1/1:4,7:12:13.90:120,14,0	0/1:3,13:16:8.01:148,0,8	1/1:4,22:26:36.10:397,36,0	0/1:6,17:23:59.07:320,0,59	0/1:4,22:26:1.91:326,0,2	1/1:1,13:14:26.93:290,27,0	1/1:7,12:19:41.89:434,42,0	1/1:6,12:18:3.87:231,4,0	1/1:5,13:18:4.69:302,5,0	1/1:12,10:22:51.08:541,51,0	0/1:6,17:23:5.16:178,0,5	1/1:16,19:35:29.50:769,30,0	1/1:5,22:27:51.05:533,51,0	1/1:4,15:19:21.76:425,22,0	0/1:7,16:23:45.02:231,0,45	0/1:2,9:11:16.96:57,0,17
chr10	29990951	.	T	TG	2897.63	PASS	AB=0.820;AC=35;AF=0.625;AN=56;BaseQRankSum=-9.833;DP=554;FS=104.452;HRun=1;HaplotypeScore=136.1975;InbreedingCoeff=0.0694;MQ=61.64;MQ0=0;MQRankSum=0.179;QD=6.20;ReadPosRankSum=3.955;VQSLOD=-0.1323;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:20:13.34:171,13,0	0/1:10,0:10:14.15:24,0,14	0/1:14,1:16:10.49:10,0,302	0/0:12,0:10:27:0,27,297	0/1:14,22:36:41.19:107,0,41	1/1:19,0:18:12.18:218,12,0	0/1:9,11:20:6.70:13,0,7	1/1:12,25:38:25.94:503,26,0	0/0:27,0:27:78.01:0,78,867	0/1:22,0:22:21.74:206,0,22	1/1:18,0:18:20.55:125,21,0	1/1:21,0:20:0.76:144,1,0	0/1:17,0:17:18.40:115,0,18	0/1:20,0:20:3.64:204,0,4	0/0:14,0:14:7.04:0,7,40	0/1:6,16:22:12.47:30,0,12	0/0:14,0:14:15.74:0,16,88	0/0:20,0:20:34.71:0,35,241	1/1:21,0:21:37.52:343,38,0	0/1:18,0:17:15.45:130,0,15	1/1:9,0:9:1.77:99,2,0	0/1:6,11:18:38.78:83,0,39	1/1:11,0:11:2.99:24,3,0	1/1:19,0:19:3:26,3,0	1/1:23,0:22:5.89:190,6,0	0/1:14,16:31:2.87:221,0,3	1/1:29,0:29:2.75:24,3,0	1/1:8,0:8:6.01:58,6,0
chr10	29990952	.	G	GGTTTTTTTT	16179.66	PASS	AB=1.000;AC=47;AF=0.839;AN=56;BaseQRankSum=-0.997;DP=573;FS=8.312;HRun=0;HaplotypeScore=147.0184;InbreedingCoeff=0.5017;MQ=60.76;MQ0=0;MQRankSum=-5.860;QD=31.23;ReadPosRankSum=-3.495;VQSLOD=2.9407;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:19:44.92:990,45,0	1/1:10,0:10:18.06:513,18,0	0/0:14,0:16:32.57:0,33,575	0/0:11,0:10:26.72:0,27,382	1/1:33,0:33:52.82:1215,53,0	1/1:18,0:17:50.81:904,51,0	1/1:22,0:21:26.29:670,26,0	1/1:34,0:34:94.68:1330,95,0	0/0:26,0:27:59.05:0,59,1753	1/1:23,0:23:58.34:873,58,0	1/1:1,15:27:20.73:382,21,0	1/1:21,0:20:45.96:793,46,0	1/1:17,0:17:41.86:689,42,0	1/1:20,0:20:52.54:817,53,0	0/1:13,0:13:18.50:192,0,18	1/1:19,0:19:15.03:430,15,0	0/1:14,0:14:29.52:326,0,30	0/1:19,0:19:99:321,0,161	1/1:21,0:21:59.83:1036,60,0	1/1:17,0:16:44.90:911,45,0	1/1:9,0:9:19.37:143,19,0	1/1:18,0:18:32.92:739,33,0	1/1:0,1:17:3.47:137,3,0	1/1:1,0:22:3.01:99,3,0	1/1:22,0:21:56.01:787,56,0	1/1:31,0:31:76.86:1447,77,0	1/1:2,0:37:5.13:142,5,0	1/1:2,1:15:6.02:291,6,0
chr10	29990955	.	T	TTGTTTTTTG	10929.57	PASS	AB=0.908;AC=36;AF=0.643;AN=56;BaseQRankSum=11.306;DP=520;FS=0.944;HRun=0;HaplotypeScore=211.1903;InbreedingCoeff=-0.1703;MQ=61.50;MQ0=0;MQRankSum=-11.948;QD=23.61;ReadPosRankSum=6.113;VQSLOD=3.9793;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:20,0:20:39.86:578,0,40	1/1:10,0:10:17.98:321,18,0	0/0:16,0:16:41.90:0,42,690	0/0:12,0:10:13.07:0,13,341	0/1:33,0:33:13.74:663,0,14	1/1:18,0:17:31.63:678,32,0	1/1:20,0:19:23.06:360,23,0	0/1:31,0:31:27.22:1067,0,27	0/0:29,0:29:86.70:0,87,2104	1/1:22,0:22:4.03:801,4,0	0/1:12,0:12:15.72:141,0,16	1/1:20,0:19:1.70:629,2,0	0/1:16,0:16:15.75:496,0,16	1/1:20,0:20:12.75:609,13,0	0/1:1,8:24:19:204,0,19	1/1:18,0:18:10.60:238,11,0	0/1:2,4:19:11.89:307,0,12	0/1:10,0:19:33.12:598,0,33	0/1:19,0:19:75.89:579,0,76	1/1:16,0:15:16.01:635,16,0	0/1:9,0:9:50.60:108,0,51	0/1:18,0:18:28.39:328,0,28	1/1:10,0:10:6.48:147,6,0	1/1:19,0:19:3.01:43,3,0	0/1:19,0:18:29.75:403,0,30	0/1:30,0:30:52.50:766,0,53	1/1:12,0:12:5.23:80,5,0	0/1:9,0:9:16.79:151,0,17
chr10	29992213	.	T	TCC	5494.66	PASS	AB=0.797;AC=51;AF=0.911;AN=56;BaseQRankSum=-5.745;DP=429;FS=6.777;HRun=9;HaplotypeScore=86.5463;InbreedingCoeff=0.1828;MQ=90.29;MQ0=1;MQRankSum=-5.695;QD=14.38;ReadPosRankSum=3.525;VQSLOD=2.4999;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:18,9:29:11.78:183,0,12	1/1:1,1:2:5.98:66,6,0	0/0:45,1:36:24.89:0,25,447	0/1:34,0:27:23.89:24,0,194	1/1:1,4:6:12.04:167,12,0	0/1:10,8:20:5.84:290,0,6	1/1:14,18:34:55.26:801,55,0	1/1:10,5:16:11.98:136,12,0	1/1:6,0:6:9.63:41,10,0	1/1:5,3:7:6.02:92,6,0	1/1:3,7:10:3.01:46,3,0	1/1:6,9:16:20.56:286,21,0	1/1:1,5:6:12.04:185,12,0	1/1:4,5:10:8.73:112,9,0	1/1:5,4:13:14.53:181,15,0	1/1:3,15:19:24.08:370,24,0	1/1:3,18:22:38.62:563,39,0	1/1:6,14:21:29.07:387,29,0	1/1:8,1:16:18.55:167,19,0	1/1:6,0:6:7.24:53,7,0	1/1:8,10:18:21.07:323,21,0	1/1:3,0:3:3.01:46,3,0	1/1:1,0:3:5.15:34,5,0	1/1:3,14:19:26.02:314,26,0	1/1:2,5:8:8.52:101,9,0	1/1:11,4:16:18.06:270,18,0	1/1:5,2:13:16.52:164,17,0	1/1:1,5:6:6.02:92,6,0
chr10	29992433	.	G	GTGTTTTTTTT	11782.44	PASS	AB=0.783;AC=48;AF=0.857;AN=56;BaseQRankSum=-2.392;DP=544;FS=7.238;HRun=0;HaplotypeScore=162.7891;InbreedingCoeff=0.3852;MQ=62.33;MQ0=1;MQRankSum=-3.163;QD=24.75;ReadPosRankSum=-1.252;VQSLOD=3.7374;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:24:57.25:818,57,0	1/1:10,0:10:29.22:306,29,0	0/0:34,0:11:19.59:0,20,179	0/0:30,0:17:11.84:0,12,285	1/1:21,0:21:56.66:593,57,0	1/1:2,0:27:6:167,6,0	1/1:17,0:17:47.65:523,48,0	1/1:30,0:23:59.64:798,60,0	0/1:7,0:7:29.34:184,0,29	1/1:17,0:15:44.88:560,45,0	1/1:1,13:20:17.32:235,17,0	1/1:17,0:16:38.77:610,39,0	1/1:16,0:16:44.47:556,44,0	1/1:14,0:13:35.87:601,36,0	0/1:1,0:10:14.87:20,0,15	1/1:22,0:21:41.15:807,41,0	0/1:10,0:29:35.53:36,0,76	0/1:24,0:24:99:441,0,109	1/1:21,0:20:50.97:691,51,0	1/1:20,0:19:49.55:428,50,0	1/1:7,0:7:19.53:172,20,0	1/1:11,0:11:23.77:185,24,0	1/1:9,0:8:23.81:276,24,0	1/1:10,0:9:17.91:217,18,0	1/1:20,0:18:44.62:416,45,0	1/1:30,0:30:68.97:1001,69,0	1/1:23,0:22:52.45:612,52,0	1/1:18,0:15:32.86:532,33,0
chr10	29992434	.	T	TG	2396.13	PASS	AB=0.965;AC=24;AF=0.429;AN=56;BaseQRankSum=-9.193;DP=537;FS=144.709;HRun=1;HaplotypeScore=75.4084;InbreedingCoeff=-0.5971;MQ=62.97;MQ0=1;MQRankSum=0.127;QD=5.60;ReadPosRankSum=5.458;VQSLOD=0.7239;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:24:55.53:174,0,56	0/1:10,0:10:39.95:82,0,40	0/0:39,0:11:20.19:0,20,103	0/1:35,0:19:0.35:0,0,171	0/1:21,0:21:21.19:218,0,21	1/1:23,0:23:2.19:19,2,0	0/1:16,0:16:47.20:182,0,47	0/1:29,0:23:89.19:89,0,129	0/0:7,0:7:17.80:0,18,128	0/1:17,0:15:81.21:161,0,81	0/1:19,0:18:9.18:15,0,9	0/1:17,0:16:60.54:61,0,61	0/1:16,0:16:30:153,0,30	0/1:14,0:13:65.02:65,0,97	0/0:10,0:10:5.01:0,5,27	0/1:20,0:19:91.56:101,0,92	0/0:29,0:29:25.85:0,26,160	0/0:24,0:24:57.86:0,58,390	0/1:7,12:18:38.43:246,0,38	0/1:20,0:19:11.23:181,0,11	0/1:7,0:7:14.30:56,0,14	0/1:11,0:11:12.52:118,0,13	0/1:9,0:8:51.01:51,0,54	0/1:10,0:9:27.67:28,0,33	0/1:19,0:17:18.70:183,0,19	0/1:14,14:29:82.36:201,0,82	0/1:23,0:22:58.89:153,0,59	0/1:18,0:15:15.12:15,0,134
chr10	29993790	.	G	GAGA	40151.78	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-8.362;DP=775;FS=1.070;HRun=0;HaplotypeScore=94.5472;InbreedingCoeff=0.9997;MQ=78.74;MQ0=3;MQRankSum=-8.799;QD=56.47;ReadPosRankSum=3.582;VQSLOD=6.8847;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,55:54:99:3338,147,0	1/1:1,12:13:33.11:760,33,0	0/0:19,0:19:54.10:0,54,829	0/0:23,0:23:57.19:0,57,952	1/1:2,27:29:69.19:1538,69,0	1/1:2,18:21:48.16:1106,48,0	1/1:0,27:28:78.27:1796,78,0	1/1:5,28:34:93.31:2053,93,0	0/0:22,0:22:57.18:0,57,945	1/1:0,23:24:71.90:1415,72,0	1/1:2,21:23:63.13:1349,63,0	1/1:0,31:32:75.26:1728,75,0	1/1:1,20:24:66.23:1520,66,0	1/1:1,22:23:66.23:1520,66,0	1/1:1,31:33:90.31:2074,90,0	1/1:2,27:29:30.11:1736,30,0	1/1:1,28:30:87.26:1956,87,0	1/1:3,19:22:39.13:897,39,0	1/1:2,17:20:60.20:1276,60,0	1/1:3,20:24:54.14:1194,54,0	1/1:4,51:57:99:2959,129,0	1/1:2,22:25:54.06:1097,54,0	1/1:0,21:22:54.19:1241,54,0	1/1:2,35:37:90.31:2075,90,0	1/1:4,33:38:87.30:1984,87,0	1/1:2,21:24:69.22:1514,69,0	1/1:2,23:26:54.16:1197,54,0	1/1:1,13:14:36.12:830,36,0
chr10	29994537	.	TTCTCCCTCTCTCTC	T	7120.51	PASS	AB=1.000;AC=45;AF=0.804;AN=56;BaseQRankSum=-0.491;DP=460;FS=1.530;HRun=0;HaplotypeScore=143.3882;InbreedingCoeff=0.6279;MQ=69.98;MQ0=13;MQRankSum=-0.834;QD=19.51;ReadPosRankSum=3.207;VQSLOD=3.5484;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:1,14:15:3.01:125,3,0	1/1:0,9:9:8.96:268,9,0	0/0:23,0:14:19.33:0,19,257	0/0:34,0:16:18.37:0,18,241	1/1:19,0:19:41.94:346,42,0	1/1:18,1:18:30.40:344,30,0	1/1:5,20:24:3.89:127,4,0	1/1:30,0:30:50.89:610,51,0	0/0:13,0:12:30.46:0,30,402	1/1:12,0:12:20.03:169,20,0	1/1:12,0:13:26.95:306,27,0	1/1:1,11:13:8.94:356,9,0	1/1:0,18:18:5.89:250,6,0	1/1:0,12:12:9.03:375,9,0	0/0:2,0:11:5.89:0,6,106	1/1:1,18:20:12.04:481,12,0	0/0:3,0:12:5.60:0,6,26	0/1:11,0:10:99:127,0,187	1/1:20,0:19:48:486,48,0	1/1:0,20:20:23.78:357,24,0	1/1:16,0:15:26.91:218,27,0	1/1:1,0:3:3.01:106,3,0	1/1:2,16:18:12.51:474,13,0	1/1:11,0:10:17.90:140,18,0	1/1:12,0:12:0.01:103,0,0	1/1:0,17:18:50.95:716,51,0	1/1:0,23:23:12.04:501,12,0	1/1:8,0:6:17.87:136,18,0
chr10	29994540	.	TCC	T	4135.99	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=1.326;DP=442;FS=10.489;HRun=3;HaplotypeScore=86.3224;InbreedingCoeff=0.6609;MQ=66.85;MQ0=17;MQRankSum=-2.293;QD=11.03;ReadPosRankSum=3.085;VQSLOD=-0.2560;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:15:2.99:23,3,0	1/1:9,0:9:8.92:63,9,0	0/0:20,0:11:19.33:0,19,257	0/0:33,0:15:18.37:0,18,241	1/1:19,0:19:41.94:346,42,0	1/1:19,0:17:32.90:265,33,0	1/1:23,0:22:2.99:23,3,0	1/1:6,22:28:50.89:611,51,0	0/0:14,0:13:25.78:0,26,210	1/1:1,10:11:24.76:198,25,0	1/1:11,0:11:26.92:223,27,0	1/1:12,0:12:8.79:67,9,0	1/1:18,0:18:5.84:45,6,0	1/1:12,0:12:8.96:67,9,0	1/1:11,0:10:5.98:47,6,0	1/1:19,0:19:11.95:90,12,0	1/1:13,0:12:5.98:47,6,0	1/1:11,0:10:29.76:224,30,0	1/1:18,0:16:48:431,48,0	1/1:20,0:20:23.70:157,24,0	1/1:16,0:14:26.91:218,27,0	1/1:2,0:2:2.98:22,3,0	1/1:17,0:17:11.84:81,12,0	1/1:11,0:10:17.90:140,18,0	1/1:9,0:9:17.95:147,18,0	1/1:19,0:18:47.87:388,48,0	1/1:23,0:22:11.95:91,12,0	1/1:9,0:7:5.78:124,6,0
chr10	29994542	.	CCTCTCT	C	1468.84	PASS	AC=36;AF=0.857;AN=42;BaseQRankSum=-0.993;DP=456;FS=10.285;HRun=0;HaplotypeScore=115.8732;InbreedingCoeff=0.3243;MQ=64.66;MQ0=22;MQRankSum=-0.632;QD=5.12;ReadPosRankSum=1.282;VQSLOD=1.6867;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:16:3.01:42,3,0	1/1:9,0:9:6.02:84,6,0	./.	./.	./.	1/1:20,0:17:3.01:42,3,0	1/1:23,0:21:4.12:44,4,0	./.	1/1:11,6:15:5.86:79,6,0	0/0:11,0:11:0.47:0,0,1	1/1:13,0:13:3.01:42,3,0	1/1:12,0:12:8.73:125,9,0	1/1:18,0:18:6.02:84,6,0	1/1:14,0:14:9.03:125,9,0	1/1:11,0:10:6.02:102,6,0	1/1:19,0:19:12.04:167,12,0	1/1:12,0:10:6.02:77,6,0	0/0:11,0:10:1.25:0,1,3	1/1:20,0:18:1.25:3,1,0	1/1:21,0:21:6.02:75,6,0	./.	1/1:2,0:2:3.01:42,3,0	1/1:16,0:16:12.49:140,12,0	./.	./.	1/1:19,0:18:8.91:125,9,0	1/1:24,0:23:11.83:167,12,0	0/0:11,0:9:7.79:0,8,32
chr10	29994680	.	CT	C	9787.37	PASS	AB=0.570;AC=48;AF=0.857;AN=56;BaseQRankSum=1.738;DP=590;FS=6.191;HRun=11;HaplotypeScore=61.4184;InbreedingCoeff=0.7133;MQ=69.74;MQ0=0;MQRankSum=-0.849;QD=17.89;ReadPosRankSum=2.759;VQSLOD=6.0122;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,21:26:21.91:387,22,0	1/1:0,9:9:23.97:197,24,0	0/0:11,0:11:17.77:0,18,163	0/0:10,0:10:12.01:0,12,128	1/1:6,33:39:92.85:764,93,0	1/1:2,32:34:89.87:739,90,0	1/1:3,18:21:47.94:394,48,0	1/1:11,15:26:15.92:337,16,0	1/1:4,13:17:32.95:271,33,0	1/1:6,16:22:19.28:362,19,0	1/1:3,17:20:18.96:362,19,0	1/1:5,12:18:34.99:277,35,0	0/1:6,21:27:4.05:383,0,4	1/1:3,15:19:46.98:375,47,0	1/1:1,13:14:35.96:296,36,0	0/0:19,0:22:50.94:0,51,513	0/1:4,11:15:34.02:167,0,34	1/1:3,13:16:32.94:271,33,0	1/1:9,25:35:45.88:581,46,0	1/1:0,19:19:56.94:468,57,0	1/1:2,14:16:38.95:320,39,0	1/1:3,15:19:24.28:350,24,0	1/1:4,26:30:68.89:567,69,0	1/1:3,11:14:29.95:246,30,0	1/1:3,31:34:54.91:658,55,0	1/1:5,19:24:50.87:418,51,0	1/1:3,19:22:47.92:394,48,0	1/1:1,10:11:12.01:204,12,0
chr10	29996157	.	GTTA	G	18868.20	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=11.708;DP=628;FS=1.246;HRun=0;HaplotypeScore=144.6943;InbreedingCoeff=0.9825;MQ=71.96;MQ0=0;MQRankSum=-3.878;QD=37.89;ReadPosRankSum=1.381;VQSLOD=5.9257;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:19:51.17:752,51,0	1/1:9,0:9:24.08:361,24,0	0/0:17,0:18:38.16:0,38,724	0/0:9,0:9:7.46:0,7,81	1/1:30,0:30:72.24:1071,72,0	1/1:32,0:32:84.27:1186,84,0	1/1:16,0:16:45.15:652,45,0	1/1:32,0:32:81.26:1138,81,0	0/0:24,0:24:69.22:0,69,1471	1/1:29,0:29:81.26:1145,81,0	1/1:16,0:16:48.16:705,48,0	1/1:26,2:28:75.25:1087,75,0	1/1:20,1:21:54.18:747,54,0	1/1:22,1:23:66.16:914,66,0	0/0:31,0:31:87.27:0,87,1803	1/1:26,0:26:72.21:1013,72,0	0/0:31,0:31:87.30:0,87,1884	0/0:17,0:17:45.15:0,45,965	1/1:23,0:23:63.15:882,63,0	1/1:23,0:23:63.18:878,63,0	1/1:19,0:19:48.15:700,48,0	1/1:22,0:22:45.15:648,45,0	1/1:24,0:24:66.19:918,66,0	1/1:8,0:8:21.54:318,22,0	1/1:27,0:27:63.21:930,63,0	1/1:26,0:26:75.21:1054,75,0	1/1:29,0:29:80.94:1152,81,0	1/1:16,0:16:42.14:616,42,0
chr10	29996160	.	AT	A	14940.30	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=13.574;DP=617;FS=2.609;HRun=2;HaplotypeScore=135.0028;InbreedingCoeff=0.9783;MQ=69.40;MQ0=0;MQRankSum=-4.346;QD=30.49;ReadPosRankSum=3.731;VQSLOD=4.5522;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,15:20:46.27:570,46,0	1/1:1,8:9:19.18:271,19,0	0/0:18,0:18:44.18:0,44,605	0/0:5,0:5:6.52:0,7,102	1/1:2,27:29:73.03:810,73,0	1/1:5,24:29:83.22:972,83,0	1/1:3,12:15:45.10:509,45,0	1/1:7,24:31:74.14:914,74,0	0/0:23,0:23:69.22:0,69,1014	1/1:4,25:29:81.63:933,82,0	1/1:1,16:17:43.17:540,43,0	1/1:3,24:27:76.13:882,76,0	1/1:3,15:18:54.15:628,54,0	1/1:4,19:23:66.19:780,66,0	0/0:31,0:31:90.26:0,90,1279	1/1:3,21:24:72.13:823,72,0	0/0:31,0:31:90.19:0,90,1301	0/0:19,0:19:51.17:0,51,760	1/1:3,21:24:56.55:746,57,0	1/1:9,15:24:59.11:690,59,0	1/1:5,12:17:48.04:526,48,0	1/1:5,18:23:37.22:519,37,0	1/1:6,18:24:66.57:722,67,0	1/1:0,8:8:21:213,21,0	1/1:3,24:27:65.05:752,65,0	1/1:10,18:28:55.57:767,56,0	1/1:2,26:28:71.39:886,71,0	1/1:0,16:16:42.10:487,42,0
chr10	29996164	.	TA	T	14729.10	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=15.051;DP=612;FS=7.024;HRun=1;HaplotypeScore=132.2760;InbreedingCoeff=0.9758;MQ=66.83;MQ0=0;MQRankSum=-3.371;QD=30.12;ReadPosRankSum=4.278;VQSLOD=4.2560;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,14:21:48.26:552,48,0	1/1:1,8:9:21.34:261,21,0	0/0:15,0:15:38.99:0,39,443	0/0:4,0:4:5.81:0,6,55	1/1:3,26:29:71:758,71,0	1/1:3,25:28:71.26:956,71,0	1/1:4,11:15:41.30:459,41,0	1/1:9,21:30:78.55:947,79,0	0/0:23,0:23:64.99:0,65,433	1/1:5,23:28:79.11:933,79,0	1/1:3,15:18:45.09:537,45,0	1/1:3,24:27:73.95:901,74,0	1/1:4,14:18:50.88:593,51,0	1/1:8,17:25:65.90:781,66,0	0/0:26,0:26:78.18:0,78,1006	1/1:5,19:24:61.16:781,61,0	0/0:32,0:32:96.26:0,96,1310	0/0:23,0:23:63.19:0,63,878	1/1:3,22:25:59.40:780,59,0	1/1:9,15:24:60.22:623,60,0	1/1:7,11:18:45.45:504,45,0	1/1:4,18:22:43.03:563,43,0	1/1:4,17:21:56.44:672,56,0	1/1:3,5:8:19.83:185,20,0	1/1:1,26:27:64.88:785,65,0	1/1:9,17:26:54.60:773,55,0	1/1:7,24:31:63.49:869,63,0	1/1:2,13:15:44.50:514,45,0
chr10	29996165	.	A	AT	12603.48	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=10.241;DP=614;FS=2.022;HRun=8;HaplotypeScore=140.2959;InbreedingCoeff=0.9667;MQ=65.35;MQ0=0;MQRankSum=-4.992;QD=24.47;ReadPosRankSum=1.004;VQSLOD=3.1906;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:17,4:21:42.07:409,42,0	1/1:8,1:9:21.04:214,21,0	0/0:13,0:13:26.64:0,27,219	0/0:4,0:4:6:0,6,54	1/1:30,1:31:60.12:607,60,0	1/1:27,1:28:79.27:748,79,0	1/1:12,3:15:33.05:322,33,0	1/1:24,7:31:87.12:853,87,0	1/1:3,18:21:51.15:589,51,0	1/1:26,1:27:75.06:738,75,0	1/1:16,2:18:42.06:409,42,0	1/1:28,0:28:75.05:719,75,0	1/1:16,2:18:47.87:425,48,0	1/1:20,4:25:51.29:555,51,0	0/0:26,0:26:60.03:0,60,549	1/1:21,4:25:65.34:635,65,0	0/0:33,0:33:84.03:0,84,769	0/0:23,0:23:60.02:0,60,549	1/1:22,3:25:74.89:743,75,0	1/1:22,2:24:59.22:564,59,0	1/1:15,3:18:39.08:399,39,0	1/1:18,4:22:63.09:639,63,0	1/1:19,2:21:54.08:525,54,0	1/1:8,0:8:12.02:114,12,0	1/1:27,0:27:69.14:699,69,0	1/1:20,7:27:63.59:634,64,0	1/1:28,3:31:72.02:692,72,0	1/1:15,0:15:39.05:372,39,0
chr10	29997041	.	CCT	C	7992.86	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=2.631;DP=537;FS=21.333;HRun=0;HaplotypeScore=91.0612;InbreedingCoeff=0.8053;MQ=66.57;MQ0=9;MQRankSum=-2.051;QD=17.08;ReadPosRankSum=4.408;VQSLOD=3.2495;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:32,0:32:56.23:435,56,0	1/1:3,0:3:8.99:74,9,0	0/0:40,0:30:76.60:0,77,768	0/0:29,0:21:53.10:0,53,615	1/1:16,1:17:47.92:393,48,0	1/1:16,0:16:32.90:263,33,0	1/1:15,1:16:41.90:343,42,0	1/1:2,23:25:62.24:545,62,0	1/1:19,0:19:7.82:236,8,0	1/1:15,2:17:47.99:431,48,0	1/1:0,9:9:2.99:24,3,0	1/1:21,2:23:44.14:354,44,0	1/1:21,1:22:59.49:444,59,0	1/1:10,1:11:20.98:177,21,0	1/1:22,2:24:52.77:435,53,0	1/1:16,2:18:35.99:312,36,0	1/1:1,20:21:8.99:104,9,0	1/1:19,0:17:19.82:262,20,0	1/1:8,14:19:53.73:422,54,0	1/1:13,1:14:35.94:293,36,0	1/1:25,0:25:47.84:381,48,0	1/1:13,0:13:32.94:269,33,0	1/1:7,0:7:14.54:122,15,0	1/1:31,1:32:56.63:444,57,0	1/1:17,2:19:47.85:386,48,0	1/1:16,1:16:41.89:351,42,0	1/1:17,2:19:53.73:421,54,0	1/1:7,0:7:8.97:71,9,0
chr10	29997089	.	TGTGTGC	T	4676.40	PASS	AB=1.000;AC=46;AF=0.821;AN=56;BaseQRankSum=-1.259;DP=341;FS=0.583;HRun=0;HaplotypeScore=80.4712;InbreedingCoeff=0.5188;MQ=67.96;MQ0=4;MQRankSum=-0.997;QD=16.07;ReadPosRankSum=2.263;VQSLOD=3.9625;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:19:34.88:278,35,0	1/1:3,0:3:8.99:74,9,0	0/0:14,0:11:33.06:0,33,339	0/0:20,0:16:34.12:0,34,361	1/1:7,1:8:18.39:173,18,0	1/1:11,0:10:18.13:126,18,0	1/1:14,1:15:35.90:322,36,0	1/1:14,0:14:34.61:286,35,0	0/0:16,0:16:32.99:0,33,601	1/1:7,1:8:21.04:262,21,0	1/1:5,1:6:11.90:120,12,0	1/1:15,2:17:33.41:331,33,0	1/1:10,1:11:17.92:174,18,0	1/1:8,1:9:26.97:255,27,0	0/1:19,0:19:73.44:73,0,178	1/1:5,2:7:18.02:259,18,0	0/1:24,0:24:99:100,0,200	0/1:20,0:19:56.47:56,0,350	1/1:6,0:6:13.55:120,14,0	1/1:8,1:9:20.17:181,20,0	1/1:12,0:12:29.77:222,30,0	1/1:6,0:6:5.99:50,6,0	0/1:3,0:3:0.04:0,0,0	1/1:22,1:23:38.90:341,39,0	1/1:11,2:13:24.41:176,24,0	1/1:13,1:14:12.99:294,13,0	1/1:11,2:13:38.91:382,39,0	1/1:1,0:1:2.98:22,3,0
chr10	29997162	.	A	ATG	727.30	PASS	AB=1.000;AC=22;AF=0.407;AN=54;BaseQRankSum=-6.945;DP=508;FS=3.056;HRun=0;HaplotypeScore=125.8201;InbreedingCoeff=0.1593;MQ=72.08;MQ0=10;MQRankSum=6.132;QD=2.34;ReadPosRankSum=-0.987;VQSLOD=2.5246;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:31,0:31:4.04:56,0,4	0/0:5,0:5:5.60:0,6,27	0/1:36,0:22:1.07:1,0,29	./.	0/1:19,0:19:3.82:32,0,4	0/0:11,0:11:7.82:0,8,34	1/1:19,0:19:4.24:27,4,0	1/1:24,0:23:0.47:1,0,0	1/1:10,8:19:6.02:91,6,0	0/0:17,0:17:0.11:0,0,18	1/1:10,0:9:2.90:16,3,0	0/0:25,0:25:18.43:0,18,92	0/0:20,0:20:11.19:0,11,54	0/0:16,0:17:8.39:0,8,40	1/1:15,0:15:15.04:173,15,0	0/0:11,0:11:5.60:0,6,27	1/1:20,1:21:13.45:193,13,0	0/1:15,0:13:24.73:110,0,25	0/1:17,0:17:7.14:7,0,28	0/0:12,0:12:2.79:0,3,13	0/1:31,0:30:0.68:102,0,1	0/0:18,0:18:5.30:0,5,27	0/1:6,0:6:7.93:8,0,18	0/1:21,0:21:10.40:10,0,34	0/0:13,0:13:5.60:0,6,27	0/1:12,0:11:5.12:44,0,5	0/1:15,0:15:7.01:7,0,48	0/0:7,0:7:11.23:0,11,54
chr10	29997180	.	GTGTGTGTGTGTGTGTA	G	5281.93	PASS	AB=1.000;AC=41;AF=0.732;AN=56;BaseQRankSum=0.808;DP=608;FS=1.383;HRun=0;HaplotypeScore=199.4238;InbreedingCoeff=0.3243;MQ=50.48;MQ0=19;MQRankSum=-1.715;QD=10.32;ReadPosRankSum=-0.554;VQSLOD=3.8839;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:41,0:40:21.53:341,22,0	1/1:9,0:9:5.86:151,6,0	0/1:33,0:9:1.07:1,0,45	0/1:35,0:11:0.99:1,0,9	0/1:26,0:26:18.27:229,0,18	1/1:11,1:12:9.03:285,9,0	1/1:14,0:14:12.10:81,12,0	0/1:18,0:17:64.32:89,0,64	0/0:16,0:16:5.68:0,6,420	1/1:23,0:23:30.21:326,30,0	1/1:10,1:10:3.89:35,4,0	1/1:32,0:32:24.83:545,25,0	1/1:21,0:21:12.04:303,12,0	1/1:20,0:20:12.02:255,12,0	0/0:26,0:26:15.05:0,15,864	1/1:22,0:22:9.03:212,9,0	0/0:31,0:31:35.66:0,36,1802	0/0:23,0:20:24.93:0,25,1194	0/1:13,0:9:6.94:299,0,7	1/1:20,0:20:3.01:76,3,0	0/1:30,0:28:16.46:141,0,16	1/1:24,0:24:8.70:162,9,0	1/1:6,1:7:14.70:219,15,0	0/1:29,0:29:6.62:207,0,7	1/1:20,0:20:5.76:112,6,0	1/1:20,0:19:21.29:331,21,0	1/1:18,0:18:0.60:478,1,0	1/1:12,1:13:12.04:400,12,0
chr10	29997182	.	GTGTGTGTGTGTGTA	G	8714.96	PASS	AB=0.877;AC=45;AF=0.804;AN=56;BaseQRankSum=-3.188;DP=603;FS=9.262;HRun=0;HaplotypeScore=172.2771;InbreedingCoeff=0.5256;MQ=50.26;MQ0=19;MQRankSum=-0.180;QD=17.19;ReadPosRankSum=-3.393;VQSLOD=2.5571;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:39,2:40:45.13:664,45,0	1/1:0,9:9:5.72:242,6,0	0/1:35,0:10:8.02:8,0,42	0/1:30,0:8:5.98:18,0,6	1/1:24,2:26:39:431,39,0	1/1:2,10:12:9.03:342,9,0	1/1:14,0:14:15.01:166,15,0	0/1:7,10:16:6.14:172,0,6	0/0:17,0:17:8.64:0,9,386	1/1:6,17:23:44.60:548,45,0	1/1:4,7:10:3.90:50,4,0	1/1:5,26:31:26.88:952,27,0	1/1:2,19:21:11.93:484,12,0	1/1:4,16:20:12.04:432,12,0	0/0:26,0:26:15.05:0,15,737	1/1:3,20:23:9.03:348,9,0	0/0:30,0:30:35.03:0,35,1513	0/0:23,0:20:5.33:0,5,1000	1/1:11,3:10:26.02:494,26,0	1/1:15,1:16:3.01:121,3,0	1/1:28,1:27:35.79:290,36,0	1/1:2,22:24:8.88:298,9,0	1/1:4,3:7:12.91:324,13,0	1/1:26,3:29:27.13:461,27,0	1/1:18,2:20:5.76:183,6,0	1/1:22,0:21:44.85:452,45,0	1/1:14,5:19:41.01:792,41,0	1/1:2,11:13:12.04:444,12,0
chr10	29997184	.	GTGTGTGTGTGTA	G	7043.83	PASS	AB=1.000;AC=46;AF=0.821;AN=56;BaseQRankSum=-1.702;DP=593;FS=9.317;HRun=0;HaplotypeScore=158.8713;InbreedingCoeff=0.5765;MQ=49.74;MQ0=20;MQRankSum=-0.314;QD=14.14;ReadPosRankSum=-3.718;VQSLOD=1.9470;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:39,0:38:44.81:509,45,0	1/1:9,0:9:5.59:175,6,0	0/1:33,0:7:25:25,0,39	0/1:31,0:7:5.98:18,0,6	1/1:26,0:26:44.76:424,45,0	1/1:12,0:12:9.03:262,9,0	1/1:14,0:14:14.84:115,15,0	1/1:16,0:15:17.29:206,17,0	0/0:16,0:16:8.65:0,9,335	1/1:22,0:22:44.94:469,45,0	1/1:11,0:10:5.74:30,6,0	1/1:29,0:29:26.73:654,27,0	1/1:21,0:21:11.93:351,12,0	1/1:20,0:20:12.04:300,12,0	0/0:27,0:27:15.05:0,15,611	1/1:22,0:22:9.03:248,9,0	0/0:29,0:29:34.60:0,35,1242	0/0:23,0:20:5.06:0,5,824	1/1:14,0:10:26.93:406,27,0	1/1:3,13:16:3.01:88,3,0	1/1:30,0:28:38.78:314,39,0	1/1:23,0:23:9.01:198,9,0	1/1:7,0:7:14.90:238,15,0	1/1:29,0:29:27.71:340,28,0	1/1:7,12:19:5.76:195,6,0	1/1:23,0:22:49.66:457,50,0	1/1:19,0:19:40.87:671,41,0	1/1:13,0:13:12.04:349,12,0
chr10	29997192	.	G	GTA	576.12	PASS	AB=0.755;AC=5;AF=0.089;AN=56;BaseQRankSum=-3.123;DP=581;FS=11.801;HRun=0;HaplotypeScore=125.2862;InbreedingCoeff=0.2229;MQ=51.26;MQ0=16;MQRankSum=1.825;QD=5.88;ReadPosRankSum=3.420;VQSLOD=2.1922;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:37:46.17:0,46,349	0/0:9,0:9:5.75:0,6,30	0/0:30,0:11:19.91:0,20,216	0/0:38,0:10:23.96:0,24,215	0/0:23,0:23:47.42:0,47,354	0/0:12,0:12:8.63:0,9,45	0/0:15,0:15:21.44:0,21,174	0/0:12,0:11:32.78:0,33,243	0/1:16,0:16:15.35:34,0,15	0/0:19,0:19:46.67:0,47,342	0/0:11,0:10:2.94:0,3,18	0/0:27,0:27:28.74:0,29,160	0/0:20,0:20:11.22:0,11,59	0/0:18,0:18:11.19:0,11,64	1/1:2,27:29:15.02:286,15,0	0/0:22,0:22:8.69:0,9,47	0/1:11,18:29:43.81:226,0,44	0/1:11,13:21:81.20:149,0,81	0/0:17,0:13:29.48:0,29,203	0/0:16,0:16:8.87:0,9,65	0/0:30,0:28:30.40:0,30,240	0/0:23,0:23:11.40:0,11,72	0/0:8,0:8:14.66:0,15,94	0/0:28,0:28:33.26:0,33,233	0/0:16,0:16:5.75:0,6,30	0/0:20,0:19:45.55:0,46,349	0/0:18,0:18:44.19:0,44,298	0/0:13,0:13:11.50:0,12,59
chr10	29997553	.	CAA	C	5015.01	PASS	AB=0.724;AC=49;AF=0.875;AN=56;BaseQRankSum=-1.808;DP=528;FS=10.612;HRun=17;HaplotypeScore=76.9805;InbreedingCoeff=0.1285;MQ=71.56;MQ0=1;MQRankSum=1.634;QD=9.83;ReadPosRankSum=4.496;VQSLOD=2.2964;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:9,5:18:10.92:147,11,0	1/1:1,4:7:11.59:122,12,0	0/0:18,0:10:9.16:0,9,77	0/1:13,0:12:9.72:10,0,10	0/1:11,11:25:19.97:184,0,20	0/1:12,9:20:11.34:211,0,11	1/1:11,9:21:35.10:268,35,0	1/1:9,5:17:20.06:142,20,0	1/1:6,7:14:17.33:130,17,0	0/1:15,6:26:4.74:152,0,5	1/1:7,7:16:4.22:134,4,0	1/1:8,14:21:22.17:309,22,0	1/1:11,3:16:12.17:91,12,0	1/1:16,7:24:25.52:188,26,0	1/1:7,0:22:24.56:104,25,0	1/1:5,11:17:38.21:284,38,0	1/1:2,3:15:27.87:140,28,0	1/1:2,0:14:19.05:81,19,0	1/1:8,10:20:20.55:284,21,0	1/1:12,11:24:15.21:299,15,0	0/1:10,5:21:9.36:111,0,9	1/1:6,8:16:0.30:131,0,0	1/1:7,10:18:23.53:228,24,0	1/1:10,8:19:13.56:213,14,0	1/1:8,12:23:26.46:291,26,0	1/1:13,15:29:17.88:324,18,0	1/1:7,16:26:52.72:390,53,0	1/1:2,2:4:5.86:47,6,0
chr10	29997623	.	TA	T	11675.20	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=5.318;DP=636;FS=0.908;HRun=10;HaplotypeScore=76.9957;InbreedingCoeff=0.9344;MQ=71.91;MQ0=0;MQRankSum=-1.371;QD=22.15;ReadPosRankSum=3.112;VQSLOD=5.6749;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,21:23:59.98:521,60,0	1/1:3,8:11:26.97:229,27,0	0/0:14,0:13:0.26:0,0,153	0/0:13,0:12:9.18:0,9,107	1/1:3,21:25:53.01:449,53,0	1/1:4,25:29:71.97:625,72,0	1/1:3,22:25:56.98:495,57,0	1/1:11,15:26:44.96:387,45,0	0/0:19,0:19:54.15:0,54,597	1/1:1,33:34:98.96:855,99,0	1/1:2,25:27:62.97:547,63,0	1/1:4,19:23:56.98:495,57,0	1/1:1,21:22:59.99:521,60,0	1/1:2,18:20:47.98:417,48,0	0/0:21,1:22:31.09:0,31,563	1/1:3,14:17:41.99:365,42,0	0/0:20,0:20:51.10:0,51,551	0/0:21,0:21:51.61:0,52,565	1/1:1,15:16:44.97:386,45,0	1/1:3,25:28:71.93:620,72,0	1/1:2,12:14:35.99:313,36,0	1/1:0,21:21:62.99:547,63,0	1/1:2,21:23:62.99:547,63,0	1/1:2,16:18:44.98:391,45,0	1/1:2,30:32:92.98:807,93,0	1/1:3,31:34:92.98:807,93,0	1/1:5,35:40:99:884,102,0	1/1:0,19:19:53.99:469,54,0
chr10	30000890	.	T	TTGTGTGTGTG	6582.80	PASS	AB=0.697;AC=42;AF=0.808;AN=52;BaseQRankSum=-6.447;DP=675;FS=0.000;HRun=0;HaplotypeScore=185.6658;InbreedingCoeff=0.5614;MQ=56.37;MQ0=14;MQRankSum=1.158;QD=12.59;ReadPosRankSum=-1.079;VQSLOD=3.5832;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:41,0:40:35.97:580,36,0	1/1:6,0:11:6.02:180,6,0	./.	./.	1/1:10,1:26:6.02:100,6,0	1/1:15,7:25:6.02:296,6,0	1/1:30,0:29:23.33:477,23,0	1/1:37,0:37:26.19:283,26,0	0/0:16,0:21:14.05:0,14,179	1/1:36,0:35:48.49:944,48,0	1/1:13,9:25:3.01:59,3,0	1/1:8,11:21:3.01:132,3,0	1/1:17,0:17:15.56:242,16,0	1/1:4,11:20:9.03:386,9,0	0/0:8,0:25:23.78:0,24,358	1/1:7,0:20:23.66:429,24,0	0/0:12,0:20:3.01:0,3,70	0/0:17,0:27:12.04:0,12,219	1/1:15,0:15:15.47:130,15,0	1/1:19,0:19:19.48:427,19,0	1/1:21,0:20:21:389,21,0	1/1:25,0:25:15.84:215,16,0	1/1:4,10:22:6.02:211,6,0	0/1:15,8:28:0:0,0,1	0/1:16,0:27:21.69:125,0,22	1/1:27,0:27:30.92:732,31,0	1/1:6,10:17:2.80:149,3,0	1/1:12,0:10:6:97,6,0
chr10	30001394	.	ATCTCTCTG	A	1949.95	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.173;DP=779;FS=1.515;HRun=0;HaplotypeScore=207.3368;InbreedingCoeff=0.9478;MQ=66.35;MQ0=5;MQRankSum=-8.389;QD=26.71;ReadPosRankSum=1.568;VQSLOD=3.5161;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,105,4144	0/0:9,0:9:21.07:0,21,871	0/0:53,0:42:63.35:0,63,1865	0/0:65,0:43:42.07:0,42,1018	0/0:30,0:30:75.24:0,75,2773	0/0:23,0:23:51.18:0,51,2065	0/0:26,0:26:60.20:0,60,2304	0/0:34,0:34:78.26:0,78,2574	0/0:24,0:24:51.17:0,51,2101	0/0:17,0:17:48.16:0,48,1747	0/0:17,0:17:48.16:0,48,1909	0/0:30,0:30:81.26:0,81,3122	0/0:17,0:17:48.16:0,48,1961	0/0:31,0:31:81.28:0,81,3275	1/1:8,24:32:45.15:960,45,0	0/0:28,0:28:66.21:0,66,2536	1/1:6,17:23:27.09:667,27,0	1/1:9,9:18:4.56:457,5,0	0/0:22,0:21:42.14:0,42,1695	0/0:21,0:21:54.19:0,54,2069	0/0:34,0:34:78.27:0,78,3189	0/0:25,0:25:60.19:0,60,2221	0/0:25,0:25:63.20:0,63,2313	0/0:31,0:31:75.26:0,75,2988	0/0:18,0:18:42.14:0,42,1751	0/0:29,0:29:75.26:0,75,3085	0/0:40,0:40:93.32:0,93,3691	0/0:13,0:13:39.13:0,39,1506
chr10	30002209	.	TTG	T	1598.74	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=0.279;DP=764;FS=18.318;HRun=0;HaplotypeScore=139.0910;InbreedingCoeff=0.9884;MQ=62.63;MQ0=11;MQRankSum=-2.009;QD=21.32;ReadPosRankSum=2.504;VQSLOD=3.1268;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,1:31:26.29:0,26,870	0/0:8,0:8:15.05:0,15,244	0/0:37,0:14:27.07:0,27,376	0/0:42,0:29:24.71:0,25,549	0/0:31,0:31:73.49:0,73,1157	0/0:20,1:20:48.16:0,48,761	0/0:31,0:31:60.20:0,60,895	0/0:35,0:34:69.12:0,69,1014	1/1:6,15:20:48.15:590,48,0	0/0:34,0:33:50.36:0,50,1294	0/0:20,0:20:39.12:0,39,591	0/0:26,0:25:55.55:0,56,852	0/0:27,1:27:26.52:0,27,818	0/0:37,0:37:96.29:0,96,1405	1/1:10,14:19:42.13:509,42,0	0/0:23,0:22:38.86:0,39,520	1/1:12,6:17:27.55:367,28,0	1/1:5,7:12:24.07:292,24,0	0/0:36,0:35:64.33:0,64,906	0/0:26,0:26:66.22:0,66,1026	0/0:46,2:46:20.51:0,21,1385	0/0:29,0:29:72.17:0,72,1170	0/0:24,0:24:60.19:0,60,920	0/0:40,0:40:90.30:0,90,1421	0/0:22,1:22:20.26:0,20,839	0/0:26,0:26:54.16:0,54,810	0/0:22,0:22:33.11:0,33,512	0/0:9,0:9:18.06:0,18,293
chr10	30002233	.	TTG	T	13309.16	PASS	AB=0.924;AC=44;AF=0.815;AN=54;BaseQRankSum=-9.625;DP=836;FS=2.558;HRun=0;HaplotypeScore=122.4357;InbreedingCoeff=0.7058;MQ=48.84;MQ0=55;MQRankSum=3.348;QD=19.81;ReadPosRankSum=-0.771;VQSLOD=5.0760;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:24,16:39:66.81:836,67,0	1/1:8,0:8:15.04:180,15,0	./.	0/0:55,0:11:6.02:0,6,73	1/1:21,7:28:49.52:631,50,0	1/1:13,10:22:50.96:550,51,0	1/1:26,9:34:78.16:921,78,0	0/1:32,7:34:99:698,0,102	0/0:21,0:18:54.09:0,54,788	1/1:26,6:30:45.14:551,45,0	1/1:8,4:12:30.09:362,30,0	1/1:24,6:27:51.06:575,51,0	1/1:18,10:27:24.73:489,25,0	1/1:27,12:38:72.10:834,72,0	0/0:15,0:18:17.71:0,18,127	1/1:13,9:21:39.09:463,39,0	0/1:14,0:20:15.64:16,0,138	0/0:13,0:18:23.82:0,24,170	1/1:27,5:24:39.06:454,39,0	1/1:17,11:27:54.03:616,54,0	1/1:47,22:58:99:1240,109,0	1/1:22,13:34:60.16:749,60,0	1/1:13,9:21:54.11:636,54,0	1/1:23,15:37:73.72:865,74,0	1/1:17,7:24:54.16:661,54,0	1/1:18,12:28:60.16:720,60,0	1/1:5,16:21:9.03:113,9,0	1/1:5,6:11:12.04:150,12,0
chr10	30002312	.	GGT	G	9273.04	PASS	AB=0.666;AC=42;AF=0.750;AN=56;BaseQRankSum=1.103;DP=844;FS=17.237;HRun=0;HaplotypeScore=164.9515;InbreedingCoeff=0.6953;MQ=43.34;MQ0=54;MQRankSum=-4.550;QD=17.94;ReadPosRankSum=-0.371;VQSLOD=3.7328;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:16,14:26:46.11:364,0,46	1/1:1,5:6:12.04:147,12,0	0/0:102,0:8:2.61:0,3,103	0/0:108,1:14:8.98:0,9,80	1/1:7,13:19:10.27:377,10,0	1/1:6,13:19:22.10:486,22,0	1/1:13,11:23:33.03:370,33,0	1/1:26,9:30:19.46:310,19,0	0/0:29,1:30:23.27:0,23,829	1/1:14,16:27:51.16:619,51,0	1/1:5,9:14:24.07:293,24,0	1/1:13,19:32:63.02:714,63,0	0/1:12,14:25:32.86:512,0,33	1/1:9,14:23:47.94:547,48,0	0/0:19,0:24:14.42:0,14,165	1/1:8,17:25:51.16:619,51,0	0/0:12,0:26:42.27:0,42,513	0/0:9,0:28:53.98:0,54,489	1/1:23,8:24:1.60:237,2,0	1/1:6,12:19:38.61:446,39,0	1/1:25,21:38:45.09:520,45,0	1/1:7,18:25:57.15:668,57,0	1/1:8,13:22:36.43:482,36,0	1/1:11,10:16:14.99:170,15,0	1/1:11,11:20:30.09:365,30,0	1/1:9,20:27:54.17:660,54,0	1/1:4,4:8:21.07:256,21,0	1/1:3,1:4:9.03:109,9,0
chr10	30002387	.	TTG	T	4211.44	PASS	AB=0.938;AC=51;AF=0.981;AN=52;BaseQRankSum=-1.417;DP=633;FS=2.480;HRun=0;HaplotypeScore=134.1434;InbreedingCoeff=0.1046;MQ=22.47;MQ0=254;MQRankSum=-4.028;QD=10.03;ReadPosRankSum=4.792;VQSLOD=4.8182;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:13,4:13:10.69:103,11,0	1/1:5,3:7:8.86:84,9,0	./.	./.	1/1:2,5:6:2.84:37,3,0	1/1:5,5:9:15.05:181,15,0	1/1:12,9:13:12.76:153,13,0	1/1:29,4:22:7.49:267,7,0	0/1:14,1:11:4.22:4,0,265	1/1:10,11:16:25.68:306,26,0	1/1:4,1:5:1.87:35,2,0	1/1:12,11:17:29.32:297,29,0	1/1:5,5:9:17.85:198,18,0	1/1:8,11:17:24.05:295,24,0	1/1:5,0:8:8.56:43,9,0	1/1:9,10:17:18.06:222,18,0	1/1:16,1:17:9.30:134,9,0	1/1:8,0:8:5.83:37,6,0	1/1:15,5:10:23.76:242,24,0	1/1:6,8:11:13.96:181,14,0	1/1:32,15:33:14.02:181,14,0	1/1:6,10:13:21.06:250,21,0	1/1:2,8:8:18.06:221,18,0	1/1:8,4:10:11.66:101,12,0	1/1:5,7:10:14.91:184,15,0	1/1:5,9:12:20.51:257,21,0	1/1:5,4:7:11.86:125,12,0	1/1:0,3:2:6.02:74,6,0
chr10	30002418	.	TG	T	1797.78	PASS	AB=0.757;AC=18;AF=0.346;AN=52;BaseQRankSum=-4.499;DP=494;FS=0.604;HRun=1;HaplotypeScore=97.9921;InbreedingCoeff=-0.5623;MQ=21.69;MQ0=194;MQRankSum=-1.403;QD=6.84;ReadPosRankSum=0.294;VQSLOD=0.5443;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:9,8:12:40:135,0,40	0/0:5,0:4:6.02:0,6,96	./.	./.	0/1:3,2:5:34.63:35,0,43	0/1:7,1:7:23.78:24,0,218	0/1:8,7:5:11.16:153,0,11	0/1:19,15:19:99:404,0,225	0/0:19,0:14:24.08:0,24,374	0/1:9,8:10:99:180,0,190	0/1:1,3:2:35.86:36,0,42	0/1:11,2:10:48.75:49,0,136	0/1:4,1:5:29.85:30,0,131	0/1:12,3:11:60.12:60,0,192	0/0:9,0:7:2.77:0,3,48	0/1:9,2:9:26.83:27,0,176	0/0:18,0:8:15.52:0,16,240	0/0:7,0:2:6.02:0,6,96	0/1:11,3:7:99:105,0,161	0/1:7,1:6:32.94:33,0,87	0/1:26,20:30:99:364,0,270	0/1:9,4:10:99:102,0,214	0/1:6,3:7:4.91:5,0,175	0/1:5,7:10:32.79:33,0,86	0/0:5,1:6:9.03:0,9,143	0/1:12,5:12:99:174,0,165	0/0:5,1:5:12.04:0,12,186	0/0:3,0:2:6.02:0,6,86
chr10	30002461	.	TTG	T	4748.10	PASS	AC=50;AF=0.962;AN=52;BaseQRankSum=-3.099;DP=540;FS=0.000;HRun=0;HaplotypeScore=81.6322;InbreedingCoeff=0.2906;MQ=28.96;MQ0=219;MQRankSum=1.184;QD=13.60;ReadPosRankSum=2.109;VQSLOD=4.3364;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:12,10:16:7.07:107,7,0	1/1:3,2:3:3.01:37,3,0	./.	./.	1/1:4,7:7:8.74:111,9,0	1/1:6,7:11:18.06:222,18,0	1/1:6,7:7:18.06:218,18,0	1/1:12,6:12:27.07:318,27,0	1/1:1,20:14:21.05:245,21,0	1/1:11,8:12:27.08:325,27,0	1/1:6,5:8:3.01:36,3,0	1/1:2,14:13:34.89:395,35,0	1/1:3,4:6:9.03:111,9,0	1/1:3,9:9:21.06:255,21,0	1/1:3,0:7:6.22:30,6,0	1/1:4,12:15:4.12:272,4,0	1/1:4,0:7:9.77:46,10,0	0/0:3,0:3:3.01:0,3,35	1/1:7,3:6:12.03:147,12,0	1/1:5,5:7:18.06:221,18,0	1/1:27,15:24:9.89:212,10,0	1/1:8,12:18:39.08:461,39,0	1/1:4,8:10:21.02:241,21,0	1/1:4,11:9:15:168,15,0	1/1:3,7:8:12.04:148,12,0	1/1:5,6:6:18.05:219,18,0	1/1:3,5:6:12:130,12,0	1/1:1,2:3:6.02:74,6,0
chr10	30002515	.	T	TGTGTGTG	14044.06	PASS	AB=0.753;AC=48;AF=0.857;AN=56;BaseQRankSum=-2.259;DP=954;FS=21.395;HRun=0;HaplotypeScore=180.0257;InbreedingCoeff=0.4797;MQ=45.70;MQ0=77;MQRankSum=0.002;QD=19.42;ReadPosRankSum=-0.892;VQSLOD=3.0121;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:16,23:37:23.84:788,24,0	1/1:3,6:8:5.93:131,6,0	0/0:100,0:17:2.69:0,3,265	0/0:104,0:10:0.27:0,0,145	1/1:9,17:24:28.55:301,29,0	1/1:10,15:25:23.99:568,24,0	1/1:26,1:26:62.96:958,63,0	1/1:45,0:37:51.05:848,51,0	0/0:26,0:23:32.74:0,33,539	1/1:16,24:36:49.12:1558,49,0	1/1:8,18:25:14.71:234,15,0	1/1:17,24:37:30.10:743,30,0	1/1:7,11:17:18.06:517,18,0	1/1:12,16:29:24.08:632,24,0	1/1:8,18:26:24.08:598,24,0	1/1:13,16:29:24.03:445,24,0	0/1:16,1:15:11.91:283,0,12	0/1:2,7:9:45.55:53,0,46	1/1:18,2:17:32.88:555,33,0	1/1:9,16:29:38.87:650,39,0	1/1:49,0:37:50.76:636,51,0	1/1:12,24:40:36.06:637,36,0	1/1:13,13:27:5.89:139,6,0	1/1:14,21:31:9.03:123,9,0	1/1:14,24:34:9.03:224,9,0	1/1:10,23:34:82.24:1773,82,0	1/1:9,2:10:18.06:430,18,0	1/1:7,0:7:18:219,18,0
chr10	30002522	.	G	GGT	3487.10	PASS	AB=0.957;AC=25;AF=0.446;AN=56;BaseQRankSum=7.564;DP=967;FS=2.347;HRun=0;HaplotypeScore=177.8158;InbreedingCoeff=-0.5858;MQ=45.12;MQ0=88;MQRankSum=-5.639;QD=4.90;ReadPosRankSum=1.927;VQSLOD=3.3686;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:40,0:37:44.81:224,0,45	0/1:9,0:8:19.07:19,0,35	0/0:90,0:14:6.29:0,6,264	0/0:105,0:9:6.01:0,6,142	0/1:30,0:24:12.48:12,0,362	1/1:21,0:21:2.60:181,3,0	0/1:25,0:25:64.21:64,0,564	0/1:45,1:38:99:233,0,800	0/0:28,0:25:45.11:0,45,574	0/1:46,0:38:99:439,0,207	0/1:26,3:27:57.25:57,0,171	0/1:42,1:38:99:217,0,105	0/1:21,1:19:16.26:141,0,16	0/1:30,0:30:99:213,0,125	0/1:28,2:28:52.21:153,0,52	0/1:30,3:32:68.59:198,0,69	0/0:19,0:20:21.15:0,21,402	0/0:11,0:11:12.04:0,12,150	0/1:24,0:17:99:124,0,311	0/1:32,0:30:99:111,0,378	0/1:48,1:40:91.44:91,0,556	0/1:40,1:39:99:194,0,203	1/1:21,2:23:6.01:75,6,0	0/1:42,0:35:28.13:111,0,28	0/1:38,0:34:39.99:40,0,136	0/1:38,1:37:99:382,0,529	0/1:8,2:9:94.19:150,0,94	0/1:4,2:6:55.94:56,0,118
chr10	30002803	.	AAAAAC	A	4481.83	PASS	AB=0.986;AC=47;AF=0.839;AN=56;BaseQRankSum=-0.203;DP=555;FS=3.819;HRun=0;HaplotypeScore=130.3063;InbreedingCoeff=0.4748;MQ=67.40;MQ0=2;MQRankSum=-1.421;QD=9.22;ReadPosRankSum=-0.700;VQSLOD=3.3190;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:16,2:18:30.30:262,30,0	1/1:7,1:8:10.17:99,10,0	0/0:27,0:19:32.15:0,32,510	0/1:9,0:5:0.83:1,0,59	1/1:21,0:20:22.34:141,22,0	1/1:18,1:19:32.34:257,32,0	1/1:13,0:13:26.22:163,26,0	1/1:23,1:24:41.88:389,42,0	0/0:20,0:20:52.92:0,53,966	1/1:29,0:28:51.88:382,52,0	1/1:25,0:25:27.39:188,27,0	1/1:23,0:23:38.92:257,39,0	1/1:18,0:18:12.64:61,13,0	1/1:17,0:17:4.58:117,5,0	1/1:24,1:25:7.99:48,8,0	1/1:24,0:24:41.60:269,42,0	0/0:22,0:22:0.92:0,1,11	0/1:30,0:30:39.96:115,0,40	0/1:21,1:22:46.21:328,0,46	1/1:23,2:25:16.91:236,17,0	1/1:11,3:14:21.65:241,22,0	1/1:11,0:10:17.75:115,18,0	1/1:12,1:13:14.61:107,15,0	1/1:18,1:19:8.15:61,8,0	1/1:22,0:21:1.36:209,1,0	1/1:16,0:16:20.47:158,20,0	1/1:32,1:33:30.16:258,30,0	1/1:8,0:8:3.84:23,4,0
chr10	30002804	.	AAAAC	A	8889.34	PASS	AB=1.000;AC=51;AF=0.911;AN=56;BaseQRankSum=-2.889;DP=551;FS=1.413;HRun=0;HaplotypeScore=104.8288;InbreedingCoeff=0.7542;MQ=67.49;MQ0=2;MQRankSum=-2.163;QD=17.64;ReadPosRankSum=-1.454;VQSLOD=4.0965;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:15,3:18:41.13:395,41,0	1/1:2,6:8:12.42:148,12,0	0/0:27,0:19:28.02:0,28,414	0/1:9,0:5:1.28:1,0,49	1/1:3,17:19:29.62:246,30,0	1/1:14,5:19:47.77:515,48,0	1/1:10,2:12:34.62:290,35,0	1/1:4,19:23:58.22:582,58,0	0/0:20,0:20:33.76:0,34,768	1/1:22,7:28:69.35:777,69,0	1/1:2,22:24:41.72:414,42,0	1/1:17,6:23:60.06:606,60,0	1/1:17,1:18:38.22:291,38,0	1/1:14,3:17:40.90:453,41,0	1/1:23,1:24:18.13:133,18,0	1/1:16,8:24:57.98:669,58,0	1/1:22,0:22:2.92:18,3,0	1/1:30,0:30:33.80:333,34,0	1/1:19,3:22:20.34:447,20,0	1/1:21,3:24:57.54:531,58,0	1/1:13,1:14:29.04:290,29,0	1/1:9,2:10:24.44:231,24,0	1/1:2,11:13:15.05:239,15,0	1/1:6,13:19:8.10:114,8,0	1/1:17,5:21:44.67:410,45,0	1/1:3,13:16:29.97:307,30,0	1/1:4,29:33:32.75:379,33,0	1/1:9,1:10:5.99:70,6,0
chr10	30002805	.	AAAC	A	8622.61	PASS	AB=1.000;AC=51;AF=0.911;AN=56;BaseQRankSum=-1.799;DP=549;FS=2.457;HRun=0;HaplotypeScore=96.5940;InbreedingCoeff=0.7906;MQ=67.61;MQ0=2;MQRankSum=-2.919;QD=17.18;ReadPosRankSum=-0.402;VQSLOD=4.2844;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:18:43.23:372,43,0	1/1:7,1:8:12.91:133,13,0	0/0:26,0:18:27.33:0,27,351	0/1:9,0:5:1.40:1,0,41	1/1:19,1:19:29.70:235,30,0	1/1:18,1:19:49.76:427,50,0	1/1:12,2:14:41.97:397,42,0	1/1:20,2:22:56.97:499,57,0	0/0:21,0:21:31.76:0,32,578	1/1:27,2:28:77.97:736,78,0	1/1:24,0:24:41.70:325,42,0	1/1:23,0:23:61.80:541,62,0	1/1:18,0:18:41.92:356,42,0	1/1:16,0:16:42.90:386,43,0	1/1:5,18:23:23.78:231,24,0	1/1:23,1:24:61.25:555,61,0	1/1:21,1:22:8.84:76,9,0	1/1:26,5:31:75.68:689,76,0	1/1:21,1:22:57.38:490,57,0	1/1:23,1:24:61.05:500,61,0	1/1:15,0:15:33.02:271,33,0	1/1:11,0:10:26.92:226,27,0	1/1:13,0:13:14.89:149,15,0	1/1:18,1:19:8.48:79,8,0	1/1:21,1:21:45.71:360,46,0	1/1:15,0:15:29.33:236,29,0	1/1:32,1:33:32.12:303,32,0	1/1:2,6:8:5.99:52,6,0
chr10	30002806	.	AAC	A	8140.19	PASS	AB=1.000;AC=51;AF=0.911;AN=56;BaseQRankSum=-0.613;DP=548;FS=9.062;HRun=0;HaplotypeScore=89.2874;InbreedingCoeff=0.7864;MQ=68.46;MQ0=2;MQRankSum=-3.369;QD=16.28;ReadPosRankSum=-0.117;VQSLOD=3.8263;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:18:43.15:349,43,0	1/1:8,0:8:13.21:99,13,0	0/0:27,0:19:28.73:0,29,311	0/1:9,0:5:1.43:1,0,33	1/1:18,0:17:29.66:207,30,0	1/1:18,0:18:49.90:393,50,0	1/1:15,0:15:44.94:384,45,0	1/1:22,0:22:58.38:472,58,0	0/0:21,0:21:16.56:0,17,407	1/1:29,0:28:77.84:653,78,0	1/1:23,0:23:41.64:297,42,0	1/1:25,0:25:67.95:566,68,0	1/1:18,0:18:41.91:351,42,0	1/1:15,0:15:44.96:385,45,0	1/1:23,0:23:23.79:177,24,0	1/1:23,0:23:59.41:501,59,0	1/1:21,1:22:8.96:83,9,0	1/1:31,1:32:81.94:674,82,0	1/1:19,3:22:60.66:500,61,0	1/1:24,0:24:63.83:475,64,0	1/1:15,0:15:32.83:250,33,0	1/1:11,0:10:26.89:215,27,0	1/1:13,0:13:14.83:121,15,0	1/1:19,0:19:8.45:67,8,0	1/1:23,0:22:53.66:404,54,0	1/1:15,0:15:29.52:223,30,0	1/1:32,0:32:32.29:246,32,0	1/1:8,0:8:5.98:46,6,0
chr10	30002807	.	AC	A	7612.22	PASS	AB=1.000;AC=52;AF=0.929;AN=56;BaseQRankSum=-0.588;DP=529;FS=7.735;HRun=1;HaplotypeScore=79.3224;InbreedingCoeff=0.5441;MQ=66.30;MQ0=2;MQRankSum=-3.898;QD=15.13;ReadPosRankSum=-0.539;VQSLOD=3.8606;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:16:43.17:327,43,0	1/1:8,0:8:13.33:77,13,0	0/0:26,0:18:26.40:0,26,272	0/1:7,0:3:0.92:1,0,26	1/1:18,0:17:29.53:191,30,0	1/1:18,0:18:49.10:354,49,0	1/1:15,0:15:44.82:366,45,0	1/1:22,0:22:58.16:432,58,0	0/1:21,0:21:19.79:20,0,232	1/1:25,3:27:77.44:597,77,0	1/1:22,1:23:41.38:268,41,0	1/1:24,0:24:65.65:531,66,0	1/1:17,0:17:44.84:367,45,0	1/1:14,1:15:44.76:362,45,0	1/1:20,3:23:23.52:156,24,0	1/1:24,0:24:66.29:484,66,0	1/1:2,18:20:8.91:62,9,0	1/1:30,2:32:82.30:671,82,0	1/1:21,1:22:62.60:488,63,0	1/1:22,1:23:65.04:449,65,0	1/1:13,0:13:32.79:225,33,0	1/1:10,1:10:26.76:204,27,0	1/1:12,1:13:14.57:92,15,0	1/1:15,2:17:8.72:57,9,0	1/1:20,0:19:53.53:387,54,0	1/1:13,0:13:29.32:203,29,0	1/1:32,0:32:32.06:201,32,0	1/1:8,0:8:5.92:40,6,0
chr10	30003126	.	T	TA	136.10	PASS	AB=0.857;AC=2;AF=0.036;AN=56;BaseQRankSum=-1.333;DP=507;FS=0.000;HRun=6;HaplotypeScore=49.3325;InbreedingCoeff=-0.0390;MQ=69.32;MQ0=0;MQRankSum=1.510;QD=5.67;ReadPosRankSum=1.729;VQSLOD=-0.6926;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:42.09:0,42,428	0/0:15,0:15:42.09:0,42,428	0/0:5,0:5:11.24:0,11,99	0/1:9,0:9:17.01:17,0,117	0/0:29,0:29:78.14:0,78,782	0/0:23,0:23:63.14:0,63,643	0/0:10,0:9:27.06:0,27,275	0/0:50,0:50:99:0,126,1285	0/0:15,0:15:39.06:0,39,389	0/0:23,0:23:60.13:0,60,612	0/0:26,0:26:72.15:0,72,729	0/0:11,0:11:33.08:0,33,337	0/0:18,0:18:54.10:0,54,543	0/0:17,0:17:42.09:0,42,428	0/0:15,0:15:39.08:0,39,398	0/0:15,0:15:39.09:0,39,398	0/0:11,0:11:30.07:0,30,306	0/0:20,0:20:45.10:0,45,459	0/0:15,0:15:42.07:0,42,417	0/0:24,0:24:69.16:0,69,704	0/1:9,6:15:99:206,0,200	0/0:7,0:7:18.04:0,18,183	0/0:17,0:17:45.10:0,45,459	0/0:6,0:6:15.03:0,15,153	0/0:21,0:21:54.12:0,54,551	0/0:34,0:34:87.16:0,87,879	0/0:26,0:26:63.12:0,63,643	0/0:13,0:13:39.09:0,39,398
chr10	30003752	.	TC	T	13444.07	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=7.789;DP=616;FS=7.277;HRun=6;HaplotypeScore=65.0257;InbreedingCoeff=0.9997;MQ=83.48;MQ0=0;MQRankSum=-3.068;QD=27.38;ReadPosRankSum=2.578;VQSLOD=5.5372;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,26:27:63.16:675,63,0	1/1:0,14:14:39.10:419,39,0	0/0:21,0:21:54.17:0,54,685	0/0:20,0:20:36.07:0,36,434	1/1:3,21:24:57.14:611,57,0	1/1:1,17:18:48.12:516,48,0	1/1:2,23:25:63.16:677,63,0	1/1:4,28:32:72.16:767,72,0	0/0:20,0:20:42.14:0,42,553	1/1:3,29:32:87.22:935,87,0	1/1:2,16:18:51.13:545,51,0	1/1:2,26:28:72.18:774,72,0	1/1:0,25:25:75.19:806,75,0	1/1:3,18:21:42.10:451,42,0	0/0:23,0:23:63.17:0,63,787	1/1:1,21:22:57.14:613,57,0	0/0:23,0:23:66.20:0,66,854	0/0:18,0:18:54.16:0,54,691	1/1:3,19:22:54.13:580,54,0	1/1:1,24:25:69.17:736,69,0	1/1:1,21:22:57.14:613,57,0	1/1:2,20:22:54.13:580,54,0	1/1:3,14:17:42.08:440,42,0	1/1:1,18:19:48.12:516,48,0	1/1:2,23:25:60.15:645,60,0	1/1:1,16:17:51.13:548,51,0	1/1:0,24:24:66.17:709,66,0	1/1:3,9:12:27.07:290,27,0
chr10	30009171	.	A	AGTTT	16045.06	PASS	AB=0.581;AC=33;AF=0.589;AN=56;BaseQRankSum=4.294;DP=572;FS=0.697;HRun=0;HaplotypeScore=108.3467;InbreedingCoeff=0.2033;MQ=79.68;MQ0=4;MQRankSum=-5.865;QD=34.58;ReadPosRankSum=4.824;VQSLOD=4.7459;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,0:20:12.20:637,12,0	1/1:2,0:13:11.23:539,11,0	0/0:23,0:23:69.17:0,69,1191	0/0:10,0:10:20.19:0,20,355	0/1:7,0:28:1.47:931,0,1	1/1:3,0:19:3.44:755,3,0	1/1:1,0:20:33.20:815,33,0	0/1:19,0:38:99:1075,0,176	0/0:23,0:23:69.19:0,69,1307	0/1:5,0:21:6.45:810,0,6	0/1:11,0:29:99:783,0,117	1/1:1,0:13:8.33:536,8,0	0/1:5,0:19:23.57:582,0,24	1/1:0,0:16:30.10:531,30,0	0/0:22,0:22:66.22:0,66,1317	0/1:4,0:20:60.12:693,0,60	0/0:17,0:17:51.16:0,51,1024	0/0:13,0:13:39.13:0,39,776	0/1:6,1:25:32.37:838,0,32	1/1:4,0:20:15.35:765,15,0	1/1:1,0:15:14.66:462,15,0	1/1:1,0:24:28.36:1052,28,0	0/1:3,0:11:30.71:379,0,31	0/1:5,0:16:41.97:406,0,42	0/1:6,0:29:30.32:1022,0,30	1/1:4,0:29:33.53:1193,34,0	0/1:5,0:23:0.55:852,0,1	1/1:2,0:11:6.14:389,6,0
chr10	30009329	.	CTTTT	C	12033.81	PASS	AB=0.622;AC=43;AF=0.768;AN=56;BaseQRankSum=-8.879;DP=607;FS=1.613;HRun=15;HaplotypeScore=115.4748;InbreedingCoeff=0.8052;MQ=67.42;MQ0=7;MQRankSum=-0.683;QD=25.33;ReadPosRankSum=2.827;VQSLOD=4.0279;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,30:32:75.16:982,75,0	1/1:2,6:8:4.43:153,4,0	0/0:28,0:18:26.85:0,27,337	0/0:16,0:11:3.01:0,3,50	1/1:7,20:27:50.53:581,51,0	1/1:2,16:17:35.76:490,36,0	1/1:1,13:14:36.11:491,36,0	1/1:7,15:22:45.05:612,45,0	0/0:1,0:22:52.64:0,53,307	1/1:10,15:26:39.42:510,39,0	1/1:4,20:25:47.94:613,48,0	1/1:5,18:23:38.61:501,39,0	1/1:3,21:25:37.24:492,37,0	1/1:7,17:24:35.95:484,36,0	0/0:4,0:21:37.84:0,38,230	1/1:2,18:20:45.10:608,45,0	0/0:6,0:20:38.45:0,38,233	0/0:3,0:25:48.90:0,49,344	0/1:9,14:23:10.25:516,0,10	1/1:6,25:32:66.82:846,67,0	1/1:6,3:9:8.65:122,9,0	1/1:6,24:29:40.21:833,40,0	1/1:6,22:29:66:876,66,0	1/1:0,16:16:39.13:532,39,0	1/1:6,17:23:23.50:552,24,0	1/1:2,13:15:39.09:481,39,0	1/1:3,21:25:54.08:719,54,0	1/1:5,1:6:2.96:41,3,0
chr10	30009685	.	GTGAGGGAAA	G	28546.32	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=14.505;DP=628;FS=0.000;HRun=0;HaplotypeScore=203.8989;InbreedingCoeff=0.9587;MQ=84.17;MQ0=0;MQRankSum=-16.576;QD=61.39;ReadPosRankSum=0.404;VQSLOD=4.5790;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,27:32:60.20:1700,60,0	1/1:0,8:8:24.08:734,24,0	0/0:23,0:23:66.17:0,66,2618	0/0:32,0:32:84.26:0,84,3221	1/1:2,25:27:63.21:1434,63,0	1/1:3,18:21:45.15:1377,45,0	1/1:6,27:33:54.19:1478,54,0	1/1:6,20:26:57.18:1674,57,0	0/0:25,0:25:69.22:0,69,3067	1/1:1,21:22:63.18:1786,63,0	1/1:1,22:23:53.03:1408,53,0	1/1:3,22:25:60.21:1824,60,0	1/1:0,23:23:66.23:2016,66,0	1/1:0,17:17:36.12:1030,36,0	0/0:32,0:32:93.31:0,93,4343	1/1:3,21:24:50.72:1553,51,0	0/0:28,0:28:81.28:0,81,3836	0/0:23,0:23:66.22:0,66,3088	1/1:2,11:13:30.09:745,30,0	1/1:2,18:20:45.15:1085,45,0	1/1:6,21:27:39.12:963,39,0	1/1:0,22:22:51.17:1292,51,0	1/1:1,14:15:30.57:780,31,0	1/1:3,14:17:12.04:310,12,0	1/1:1,17:18:45.15:1325,45,0	1/1:1,23:24:69.24:2070,69,0	1/1:2,24:26:63.21:1871,63,0	1/1:1,1:2:3.01:92,3,0
chr10	30011286	.	C	CTTTCCAGG	72796.83	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-8.304;DP=811;FS=5.485;HRun=0;HaplotypeScore=171.5055;InbreedingCoeff=0.9993;MQ=71.75;MQ0=0;MQRankSum=-13.598;QD=100.83;ReadPosRankSum=5.467;VQSLOD=5.5023;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,18:35:69.19:2581,69,0	1/1:6,14:20:51.18:2219,51,0	0/0:25,0:25:66.12:0,66,1649	0/0:31,0:31:74.88:0,75,1985	1/1:3,21:25:65.45:2621,65,0	1/1:8,13:23:57.15:2161,57,0	1/1:11,12:24:63.22:2513,63,0	1/1:15,15:38:99:3621,105,0	0/0:33,0:33:96.28:0,96,2366	1/1:6,27:33:93.32:4081,93,0	1/1:6,12:18:42.14:1796,42,0	1/1:7,28:38:99:4254,102,0	1/1:8,15:27:66.23:2564,66,0	1/1:3,22:29:72.25:3041,72,0	1/1:3,27:32:81.28:3491,81,0	1/1:14,27:43:99:4716,117,0	1/1:5,12:20:48.16:2006,48,0	1/1:5,5:14:27.09:1075,27,0	1/1:14,16:31:84.27:3101,84,0	1/1:6,26:35:96.33:3790,96,0	1/1:11,8:24:36.08:1418,36,0	1/1:10,20:33:81.11:3268,81,0	1/1:5,15:21:57.20:2234,57,0	1/1:8,11:28:36.12:1282,36,0	1/1:6,25:32:90.25:3749,90,0	1/1:11,35:47:99:5670,138,0	1/1:8,29:42:98.93:4276,99,0	1/1:3,7:10:30.10:1267,30,0
chr10	30012177	.	G	GTATA	423.99	PASS	AB=1.000;AC=4;AF=0.071;AN=56;BaseQRankSum=1.857;DP=476;FS=27.522;HRun=0;HaplotypeScore=87.2867;InbreedingCoeff=0.3111;MQ=71.36;MQ0=6;MQRankSum=-0.473;QD=10.87;ReadPosRankSum=-1.584;VQSLOD=0.7967;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:72.20:0,72,1158	0/0:5,0:5:15.05:0,15,251	0/0:16,0:13:5.30:0,5,40	0/0:42,0:19:3.67:0,4,10	0/0:24,0:24:50.94:0,51,796	0/0:26,0:26:60.17:0,60,966	0/0:12,0:12:24.07:0,24,381	0/0:50,0:50:99:0,99,1603	1/1:0,9:12:14.84:316,15,0	0/0:21,0:20:48.16:0,48,789	0/0:27,0:27:66.95:0,67,991	0/0:12,0:12:27.09:0,27,455	0/0:7,0:7:18.06:0,18,311	0/0:14,0:14:36.07:0,36,530	0/1:18,0:18:99:144,0,341	0/0:10,0:10:18.04:0,18,283	0/1:9,0:9:50.72:75,0,51	0/0:11,0:11:18:0,18,235	0/0:13,0:13:33.07:0,33,475	0/0:18,0:18:42.09:0,42,612	0/0:4,0:4:3.01:0,3,52	0/0:6,0:6:12.01:0,12,150	0/0:10,0:10:18.06:0,18,310	0/0:5,0:5:3.01:0,3,52	0/0:18,0:18:51.16:0,51,845	0/0:27,0:27:75.05:0,75,1177	0/0:20,0:20:36.11:0,36,591	0/0:9,0:8:18.03:0,18,248
chr10	30012184	.	T	TATAGATATAG	939.15	PASS	AB=0.917;AC=4;AF=0.071;AN=56;BaseQRankSum=4.234;DP=490;FS=10.053;HRun=0;HaplotypeScore=143.9459;InbreedingCoeff=0.3221;MQ=70.00;MQ0=6;MQRankSum=-3.071;QD=22.91;ReadPosRankSum=0.318;VQSLOD=2.6114;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:80.82:0,81,2064	0/0:9,0:9:24.04:0,24,491	0/0:15,0:12:11.95:0,12,64	0/0:48,0:23:1.56:0,2,44	0/0:22,0:22:60.15:0,60,1353	0/0:27,0:27:69.19:0,69,1702	0/0:12,0:12:30.10:0,30,765	0/0:44,0:44:99:0,123,2573	0/0:13,0:13:16.72:0,17,108	0/0:22,0:21:54.14:0,54,1458	0/0:27,0:27:78.25:0,78,2038	0/0:14,0:14:33.09:0,33,815	0/0:8,0:8:24.05:0,24,642	0/0:17,0:17:42.12:0,42,1091	0/1:16,4:20:99:592,0,154	0/0:10,0:10:21.06:0,21,559	1/1:8,2:10:11.87:334,12,0	0/1:11,0:11:99:124,0,145	0/0:12,0:12:36.12:0,36,913	0/0:16,0:16:45.14:0,45,1099	0/0:5,0:5:9.01:0,9,172	0/0:9,0:9:21.02:0,21,368	0/0:8,0:8:24.01:0,24,562	0/0:1,0:1:3.01:0,3,94	0/0:23,0:23:66.16:0,66,1554	0/0:26,0:26:78.19:0,78,1984	0/0:21,0:21:39.12:0,39,1052	0/0:9,0:8:17.95:0,18,460
chr10	30012205	.	ATG	A	50.42	PASS	AB=0.828;AC=3;AF=0.054;AN=56;BaseQRankSum=4.965;DP=518;FS=8.203;HRun=0;HaplotypeScore=83.5386;InbreedingCoeff=-0.0590;MQ=70.18;MQ0=4;MQRankSum=0.565;QD=0.75;ReadPosRankSum=-2.630;VQSLOD=0.3060;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:66.23:0,66,1272	0/0:11,0:11:30.10:0,30,579	0/0:17,0:14:27.59:0,28,469	0/1:45,0:27:7.13:7,0,296	0/0:22,0:22:63.19:0,63,1141	0/0:26,0:26:75.24:0,75,1402	0/0:11,0:11:27.09:0,27,520	0/0:41,0:41:99:0,120,2220	0/0:10,0:10:18.06:0,18,347	0/0:26,0:26:78.23:0,78,1408	0/0:26,0:26:78.27:0,78,1494	0/0:20,0:20:54.17:0,54,1008	0/0:16,0:16:42.14:0,42,808	0/0:23,0:23:60.17:0,60,1070	0/0:24,0:24:20.19:0,20,705	0/0:10,0:10:24.08:0,24,442	0/1:6,5:11:70.46:70,0,220	0/1:7,2:9:67.30:67,0,319	0/0:16,0:16:45.13:0,45,777	0/0:15,0:15:45.13:0,45,785	0/0:6,0:6:15.05:0,15,277	0/0:11,0:11:33.09:0,33,562	0/0:11,0:11:30.09:0,30,536	0/0:3,0:3:6.02:0,6,103	0/0:21,0:21:63.19:0,63,1182	0/0:24,0:24:72.25:0,72,1365	0/0:23,0:23:57.18:0,57,1066	0/0:7,0:7:18.04:0,18,302
chr10	30012296	.	GTC	G	395.67	PASS	AB=0.857;AC=5;AF=0.089;AN=56;BaseQRankSum=3.261;DP=616;FS=0.863;HRun=0;HaplotypeScore=214.5589;InbreedingCoeff=-0.1235;MQ=55.72;MQ0=11;MQRankSum=-5.050;QD=3.53;ReadPosRankSum=-6.824;VQSLOD=0.5235;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:5.91:0,6,104	0/0:14,0:14:18.06:0,18,311	0/0:22,0:14:35.84:0,36,555	0/0:31,0:25:45.42:0,45,799	0/0:31,2:33:26.95:0,27,387	0/0:31,2:33:26.95:0,27,408	0/0:19,2:19:18.06:0,18,308	0/1:30,13:39:99:303,0,838	0/0:11,0:11:12.04:0,12,185	0/0:27,2:29:2.23:0,2,1025	0/0:13,2:15:5.91:0,6,104	0/1:19,1:19:6.95:7,0,262	0/1:20,2:22:9.02:9,0,332	0/0:21,1:22:34.33:0,34,508	0/0:32,0:32:27.09:0,27,467	0/0:24,0:24:17.94:0,18,311	0/0:12,0:12:11.27:0,11,247	0/0:14,0:14:5.83:0,6,299	0/1:13,6:17:99:173,0,450	0/0:26,0:26:30.55:0,31,462	0/0:11,5:15:12.04:0,12,190	0/0:19,0:19:20.93:0,21,308	0/0:11,1:12:18.06:0,18,301	0/0:20,1:21:5.99:0,6,96	0/0:22,0:22:27.08:0,27,466	0/0:20,1:21:13.93:0,14,883	0/0:25,0:25:39.13:0,39,661	0/1:7,1:8:12.01:12,0,333
chr10	30012318	.	CTCTGTGTGTG	C	624.34	PASS	AB=1.000;AC=16;AF=0.286;AN=56;BaseQRankSum=9.094;DP=581;FS=4.674;HRun=0;HaplotypeScore=278.6786;InbreedingCoeff=-0.1975;MQ=44.10;MQ0=12;MQRankSum=-6.313;QD=2.36;ReadPosRankSum=3.435;VQSLOD=1.5349;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:29:5.91:0,6,46	0/1:14,0:14:40.49:40,0,65	0/0:11,0:8:17.61:0,18,173	0/0:15,0:12:21.04:0,21,255	0/0:33,0:33:5.33:0,5,47	0/1:30,0:30:41.21:41,0,77	0/0:17,0:15:5.99:0,6,50	0/0:36,0:30:75.01:0,75,597	1/1:1,9:10:3.01:95,3,0	0/0:26,0:25:14.37:0,14,606	0/0:20,0:20:2.82:0,3,25	0/1:20,0:19:76.69:78,0,77	0/1:23,0:23:78.90:79,0,85	0/1:21,0:21:79.01:79,0,79	0/0:34,0:34:11.95:0,12,94	0/0:26,0:26:8.58:0,9,95	0/1:9,0:9:3.08:3,0,35	0/1:14,0:14:57.29:57,0,77	0/0:26,0:24:25.15:0,25,412	0/1:27,0:27:37.57:38,0,114	0/0:18,0:16:2.99:0,3,24	0/0:15,0:15:6.33:0,6,70	0/0:9,0:8:5.99:0,6,48	1/1:21,0:21:3.35:16,3,0	0/1:22,0:22:5.98:6,0,127	0/1:24,0:24:78.87:79,0,369	0/1:24,0:22:87.36:123,0,87	0/1:5,0:5:36.94:39,0,37
chr10	30012322	.	G	GTCTCTCTGTCTCTCTC	13867.54	PASS	AB=0.819;AC=44;AF=0.786;AN=56;BaseQRankSum=-0.873;DP=557;FS=22.353;HRun=0;HaplotypeScore=272.7939;InbreedingCoeff=0.4947;MQ=39.39;MQ0=11;MQRankSum=-0.416;QD=28.53;ReadPosRankSum=3.615;VQSLOD=2.5463;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:11,17:30:0.47:0,0,1	1/1:13,0:13:14.26:464,14,0	0/0:5,0:4:9.03:0,9,267	0/0:9,0:6:11.23:0,11,406	1/1:32,0:32:4.06:88,4,0	1/1:29,0:29:8.34:360,8,0	1/1:23,0:21:8.15:208,8,0	1/1:35,0:29:80.91:1503,81,0	0/0:10,0:10:6.01:0,6,60	1/1:23,0:22:63.20:2058,63,0	1/1:20,0:20:2.01:97,2,0	1/1:21,0:20:21.75:390,22,0	1/1:22,0:22:23.09:550,23,0	1/1:21,0:21:19.61:422,20,0	1/1:32,0:32:14.22:345,14,0	1/1:26,0:26:28.36:913,28,0	1/1:8,0:8:3.16:60,3,0	0/1:7,0:13:77.81:350,0,78	1/1:23,0:22:53.97:1353,54,0	1/1:30,0:30:25.01:552,25,0	0/0:15,0:13:1.25:0,1,3	1/1:15,0:15:11.63:464,12,0	1/1:9,0:8:6:107,6,0	0/1:20,0:21:6.74:121,0,7	1/1:20,0:20:18.01:669,18,0	1/1:24,0:24:72.09:2048,72,0	1/1:21,0:19:26.58:532,27,0	1/1:5,0:5:9.47:215,9,0
chr10	30012334	.	GTGTGTGTGTGTGTGTGTGTGTGTA	G	3212.49	PASS	AB=0.984;AC=20;AF=0.385;AN=52;BaseQRankSum=-2.454;DP=449;FS=0.000;HRun=0;HaplotypeScore=248.0926;InbreedingCoeff=-0.2066;MQ=38.08;MQ0=12;MQRankSum=0.050;QD=11.90;ReadPosRankSum=-0.220;VQSLOD=2.3838;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:22:0:0,0,0	0/1:16,0:16:77.18:150,0,77	0/0:3,0:2:3.01:0,3,184	0/0:11,0:5:6.02:0,6,218	1/1:27,0:26:0.94:2,1,0	0/0:23,0:23:0.79:0,1,9	./.	0/1:25,0:22:49.92:106,0,50	0/0:14,0:14:16.87:0,17,659	0/1:18,0:17:99:272,0,136	1/1:18,0:18:0.47:2,0,0	1/1:25,0:24:4.50:320,4,0	0/1:17,0:17:61.94:642,0,62	0/1:10,3:13:15.56:623,0,16	0/0:21,0:21:0.35:0,0,1	0/1:18,0:18:51.65:69,0,52	1/1:5,0:5:5.98:82,6,0	0/1:10,0:10:62.38:62,0,108	0/1:19,0:18:99:176,0,153	0/0:12,14:26:2.57:0,3,11	0/0:12,0:10:0.89:0,1,2	0/0:10,0:10:2.70:0,3,43	./.	0/0:17,0:17:2.25:0,2,37	0/0:14,0:14:5.81:0,6,64	0/1:15,0:15:99:417,0,233	0/1:15,0:13:41.23:232,0,41	0/1:4,0:4:15.51:187,0,16
chr10	30012342	.	GTGTGTGTGTGTGTGTA	G	3500.74	PASS	AB=0.976;AC=37;AF=0.740;AN=50;BaseQRankSum=2.007;DP=477;FS=7.517;HRun=0;HaplotypeScore=222.6986;InbreedingCoeff=0.2453;MQ=35.60;MQ0=10;MQRankSum=-0.341;QD=8.64;ReadPosRankSum=2.771;VQSLOD=1.7798;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:22:0:1,0,0	1/1:6,11:17:5.33:144,5,0	0/0:4,0:2:6:0,6,125	0/1:13,0:4:1.75:2,0,81	0/1:23,2:24:0:1,0,0	1/1:24,2:26:3.90:41,4,0	./.	0/0:15,0:13:2.94:0,3,30	0/0:13,0:13:16.28:0,16,276	1/1:28,0:27:43.72:399,44,0	1/1:17,1:18:0.47:1,0,0	1/1:9,19:28:11.62:332,12,0	0/1:22,1:23:9.80:594,0,10	1/1:13,0:13:17.87:425,18,0	1/1:26,0:26:11.40:102,11,0	0/1:17,1:18:2.69:86,0,3	1/1:7,0:7:3.01:55,3,0	1/1:13,0:13:3.07:158,3,0	0/1:17,0:16:6.83:224,0,7	1/1:26,0:26:2.83:42,3,0	./.	1/1:12,0:12:2.37:9,2,0	./.	1/1:18,0:18:3.35:16,3,0	1/1:16,1:17:5.87:36,6,0	0/1:13,0:13:8.91:384,0,9	1/1:18,0:16:15.01:309,15,0	1/1:4,0:4:8.68:142,9,0
chr10	30012348	.	GTGTGTGTGTA	G	3587.28	PASS	AB=1.000;AC=48;AF=0.889;AN=54;BaseQRankSum=2.494;DP=503;FS=5.438;HRun=0;HaplotypeScore=210.2528;InbreedingCoeff=0.1763;MQ=37.31;MQ0=10;MQRankSum=-1.005;QD=7.65;ReadPosRankSum=2.909;VQSLOD=1.9551;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:30,1:28:12.87:97,13,0	1/1:17,0:17:5.69:114,6,0	0/0:9,0:6:17.79:0,18,134	0/1:16,0:7:9.52:10,0,58	1/1:28,0:27:5.90:49,6,0	1/1:23,1:24:3.48:91,3,0	./.	1/1:20,0:18:16.86:160,17,0	0/1:12,0:12:52.04:52,0,56	1/1:27,0:26:6.18:334,6,0	1/1:18,1:19:2.95:24,3,0	1/1:27,1:28:11.77:221,12,0	1/1:24,0:24:19.31:286,19,0	1/1:14,0:14:16.97:219,17,0	1/1:26,2:28:14.64:121,15,0	1/1:22,0:21:8.88:81,9,0	1/1:7,0:7:3.01:50,3,0	1/1:14,1:15:26.41:252,26,0	1/1:10,0:9:3.09:192,3,0	1/1:23,1:24:3.01:94,3,0	1/1:16,0:14:3.46:25,3,0	1/1:13,0:13:3.01:40,3,0	0/0:7,0:6:0:0,0,0	1/1:19,0:19:3.19:49,3,0	1/1:15,0:15:5.98:98,6,0	1/1:16,2:18:41.68:494,42,0	1/1:16,2:16:15.01:336,15,0	1/1:4,0:4:5.89:98,6,0
chr10	30012350	.	GTGTGTGTA	G	4306.84	PASS	AB=1.000;AC=48;AF=0.889;AN=54;BaseQRankSum=2.610;DP=490;FS=5.273;HRun=0;HaplotypeScore=196.1323;InbreedingCoeff=0.2537;MQ=40.04;MQ0=10;MQRankSum=-1.753;QD=9.47;ReadPosRankSum=3.098;VQSLOD=3.1905;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:27,3:27:15.35:121,15,0	1/1:14,3:17:5.69:152,6,0	0/0:10,0:6:17.79:0,18,134	0/1:19,0:10:3.53:4,0,105	1/1:16,11:26:5.86:49,6,0	1/1:7,16:23:3.01:58,3,0	./.	1/1:18,0:16:23.99:191,24,0	0/1:12,0:12:29.84:30,0,56	1/1:7,19:25:23.86:436,24,0	1/1:14,4:18:5.84:48,6,0	1/1:24,4:28:11.94:298,12,0	1/1:3,22:25:20.83:456,21,0	1/1:7,4:11:17.70:269,18,0	1/1:27,0:27:14.90:122,15,0	1/1:15,5:19:8.90:143,9,0	1/1:7,0:7:2.68:11,3,0	1/1:17,0:17:29.50:239,30,0	1/1:2,8:9:6.35:300,6,0	1/1:19,3:22:3.01:62,3,0	1/1:16,0:14:3.46:25,3,0	1/1:0,12:12:2.97:71,3,0	0/0:7,0:6:0:0,0,0	1/1:18,1:19:2.73:81,3,0	1/1:2,12:14:5.98:161,6,0	1/1:15,1:16:41.68:484,42,0	1/1:5,12:15:15.01:361,15,0	1/1:1,3:4:5.89:136,6,0
chr10	30012356	.	GTA	G	2279.52	PASS	AB=1.000;AC=47;AF=0.870;AN=54;BaseQRankSum=2.708;DP=466;FS=5.580;HRun=0;HaplotypeScore=171.2396;InbreedingCoeff=0.3783;MQ=42.86;MQ0=8;MQRankSum=-2.353;QD=5.59;ReadPosRankSum=3.388;VQSLOD=2.5380;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:26:20.77:168,21,0	1/1:17,0:17:5.75:39,6,0	0/0:13,0:9:19.89:0,20,178	0/0:22,0:13:5.18:0,5,158	1/1:24,0:23:5.79:49,6,0	1/1:22,0:22:2.96:19,3,0	./.	1/1:17,0:15:39.11:301,39,0	0/1:15,0:15:11.59:12,0,119	1/1:22,0:21:7.41:235,7,0	1/1:15,0:15:8.98:73,9,0	1/1:26,0:26:11.28:63,11,0	1/1:23,0:23:18.29:79,18,0	1/1:12,0:12:20.28:134,20,0	1/1:20,1:21:17.84:147,18,0	1/1:18,0:17:8.53:45,9,0	1/1:0,5:5:3:25,3,0	1/1:17,0:17:26.78:205,27,0	1/1:9,0:9:5.88:141,6,0	1/1:19,0:19:2.90:23,3,0	1/1:17,0:15:6.46:49,6,0	1/1:12,0:12:2.87:17,3,0	0/0:6,0:5:0.47:0,0,1	1/1:21,0:21:8.43:77,8,0	1/1:14,0:14:5.94:41,6,0	1/1:15,0:15:39.03:289,39,0	1/1:15,0:14:14.87:133,15,0	1/1:3,0:3:5.93:40,6,0
chr10	30014121	.	CT	C	19712.51	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=3.366;DP=670;FS=9.981;HRun=4;HaplotypeScore=66.1574;InbreedingCoeff=0.9907;MQ=75.12;MQ0=0;MQRankSum=-3.875;QD=31.69;ReadPosRankSum=2.038;VQSLOD=5.0745;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,35:35:87.27:1042,87,0	1/1:0,6:6:15.05:180,15,0	0/0:10,0:10:18.05:0,18,229	0/0:15,0:15:24.18:0,24,424	1/1:2,24:26:66.20:792,66,0	1/1:0,38:38:99:1224,102,0	1/1:1,23:24:60.18:720,60,0	1/1:4,31:35:93.26:1093,93,0	0/0:23,0:23:69.23:0,69,966	1/1:1,27:28:78.22:913,78,0	1/1:0,25:25:63.19:756,63,0	1/1:2,16:18:42.13:504,42,0	1/1:1,20:21:57.17:684,57,0	1/1:1,26:27:69.21:828,69,0	1/1:0,20:20:57.17:684,57,0	1/1:0,25:25:72.22:864,72,0	1/1:0,26:26:75.23:900,75,0	1/1:2,20:22:51.16:612,51,0	1/1:2,14:16:42.11:489,42,0	1/1:3,24:27:72.22:864,72,0	1/1:0,29:29:69.21:828,69,0	1/1:0,20:20:57.17:684,57,0	1/1:0,24:24:72.22:864,72,0	1/1:1,18:19:36.11:432,36,0	1/1:0,28:28:81.25:972,81,0	1/1:4,34:38:99:1200,102,0	1/1:0,29:29:84.26:1008,84,0	1/1:0,16:16:48.15:575,48,0
chr10	30015580	.	ATGCATATATACATT	A	7729.88	PASS	AC=46;AF=0.885;AN=52;BaseQRankSum=2.453;DP=213;FS=0.000;HRun=0;HaplotypeScore=101.4733;InbreedingCoeff=0.5258;MQ=71.45;MQ0=0;MQRankSum=-5.222;QD=43.18;ReadPosRankSum=1.318;VQSLOD=4.3787;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,0:7:12.02:194,12,0	1/1:4,0:4:3.01:80,3,0	0/0:9,0:8:14.11:0,14,165	0/0:15,0:11:3.32:0,3,34	1/1:8,0:8:9.03:194,9,0	1/1:11,0:11:24.08:601,24,0	1/1:3,0:3:6.01:105,6,0	1/1:30,0:28:84.28:1572,84,0	0/0:7,0:7:21.07:0,21,1292	1/1:12,0:12:33.10:675,33,0	1/1:8,0:8:15.05:335,15,0	1/1:4,0:4:3.01:79,3,0	1/1:6,0:6:9.03:229,9,0	1/1:9,0:9:12.04:316,12,0	1/1:0,5:5:3.01:130,3,0	1/1:5,0:5:12.03:227,12,0	1/1:0,12:12:9.03:361,9,0	./.	1/1:4,0:4:12.04:286,12,0	1/1:4,0:4:6.02:156,6,0	1/1:3,0:3:3:25,3,0	1/1:2,0:2:3.01:80,3,0	1/1:6,0:6:6.02:158,6,0	./.	1/1:5,0:5:6.02:128,6,0	1/1:9,0:9:24.08:526,24,0	1/1:13,0:13:27.08:559,27,0	1/1:9,0:9:27.09:714,27,0
chr10	30015581	.	TGC	T	4305.93	PASS	AC=46;AF=0.885;AN=52;BaseQRankSum=3.127;DP=208;FS=0.000;HRun=0;HaplotypeScore=76.0074;InbreedingCoeff=0.5167;MQ=69.60;MQ0=1;MQRankSum=-4.639;QD=24.75;ReadPosRankSum=0.830;VQSLOD=5.0399;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,3:7:12.02:147,12,0	1/1:0,4:4:3.01:34,3,0	0/0:10,0:8:11.88:0,12,151	0/0:14,0:10:2.77:0,3,23	1/1:0,8:8:9:103,9,0	1/1:1,10:11:24.07:278,24,0	1/1:1,1:2:6.01:59,6,0	1/1:10,19:28:84.21:1169,84,0	0/0:7,0:7:21.07:0,21,427	1/1:0,12:12:33.09:433,33,0	1/1:2,6:8:15.04:193,15,0	1/1:0,3:3:3.01:35,3,0	1/1:0,6:6:9.03:115,9,0	1/1:0,8:8:12.03:132,12,0	1/1:5,0:5:2.97:20,3,0	1/1:2,3:5:12.02:135,12,0	1/1:12,0:12:8.94:74,9,0	./.	1/1:0,4:4:12.04:154,12,0	1/1:0,4:4:6.01:64,6,0	1/1:2,1:3:2.99:24,3,0	1/1:0,2:2:3.01:34,3,0	1/1:0,6:6:6.02:65,6,0	./.	1/1:1,4:5:6.02:80,6,0	1/1:0,8:8:24.08:331,24,0	1/1:5,8:13:27.07:328,27,0	1/1:0,9:9:27.07:299,27,0
chr10	30015584	.	ATATATACATT	A	6775.49	PASS	AC=46;AF=0.885;AN=52;BaseQRankSum=1.478;DP=214;FS=1.214;HRun=0;HaplotypeScore=92.9224;InbreedingCoeff=0.4901;MQ=66.18;MQ0=1;MQRankSum=-4.904;QD=37.43;ReadPosRankSum=1.104;VQSLOD=4.0711;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,2:8:4.26:84,4,0	1/1:2,2:4:3.01:81,3,0	0/0:8,0:6:5.88:0,6,45	0/0:15,0:11:5.79:0,6,28	1/1:4,4:8:9.03:193,9,0	1/1:2,9:11:21.07:563,21,0	1/1:2,1:3:3.01:80,3,0	1/1:21,10:28:72.69:1305,73,0	0/0:7,0:7:21.07:0,21,770	1/1:6,6:12:31.34:651,31,0	1/1:6,3:9:12.04:289,12,0	1/1:2,1:3:3.01:80,3,0	1/1:0,6:6:9.03:232,9,0	1/1:2,6:8:12.04:321,12,0	1/1:5,0:5:3.01:72,3,0	1/1:1,3:4:7.58:162,8,0	1/1:12,0:12:9.03:187,9,0	./.	1/1:1,3:4:12.04:290,12,0	1/1:2,2:4:6.02:158,6,0	1/1:2,1:3:1.25:3,1,0	1/1:1,1:2:3.01:81,3,0	1/1:2,4:6:6.02:160,6,0	./.	1/1:3,3:6:6.02:126,6,0	1/1:3,5:8:21.07:475,21,0	1/1:8,7:15:18.06:456,18,0	1/1:0,9:9:27.09:725,27,0
chr10	30015739	.	C	CCT	9152.70	PASS	AB=0.672;AC=46;AF=0.821;AN=56;BaseQRankSum=-4.606;DP=475;FS=8.832;HRun=0;HaplotypeScore=66.1793;InbreedingCoeff=0.0612;MQ=68.93;MQ0=9;MQRankSum=1.412;QD=20.75;ReadPosRankSum=2.672;VQSLOD=4.7088;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:9,11:21:19.65:226,0,20	1/1:2,5:7:6.02:85,6,0	0/1:34,0:18:0.52:1,0,178	0/0:34,0:21:1.84:0,2,74	1/1:3,11:15:24.08:354,24,0	1/1:0,17:18:39.12:593,39,0	1/1:5,10:15:18.06:278,18,0	0/1:19,20:38:6.17:834,0,6	1/1:3,10:13:21.07:337,21,0	1/1:2,6:7:15.05:223,15,0	1/1:1,13:15:27.09:410,27,0	1/1:3,13:16:30.10:482,30,0	1/1:5,10:16:21.07:337,21,0	1/1:3,9:12:24.08:385,24,0	1/1:11,0:11:19.05:151,19,0	0/1:4,9:13:12.07:313,0,12	1/1:24,0:24:26.46:234,26,0	1/1:12,0:12:11.40:82,11,0	1/1:6,8:12:27.07:403,27,0	0/1:7,13:19:0.12:454,0,0	1/1:3,13:17:24.08:385,24,0	0/1:5,5:10:24.01:121,0,24	1/1:1,14:16:24.08:368,24,0	1/1:2,9:11:21.07:337,21,0	0/1:3,7:10:18.13:223,0,18	1/1:4,16:20:47.89:701,48,0	0/1:6,7:14:15.43:257,0,15	1/1:2,15:17:36.12:578,36,0
chr10	30015758	.	T	TCTCTC	732.66	PASS	AB=0.877;AC=6;AF=0.107;AN=56;BaseQRankSum=4.054;DP=472;FS=11.785;HRun=0;HaplotypeScore=118.0506;InbreedingCoeff=0.2293;MQ=68.45;MQ0=4;MQRankSum=-3.860;QD=6.98;ReadPosRankSum=0.930;VQSLOD=1.6422;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:20:22.88:0,23,466	0/0:4,0:4:5.91:0,6,45	0/1:29,0:17:17.64:18,0,583	0/1:31,0:17:6.50:7,0,315	0/0:15,0:15:35.95:0,36,394	0/0:25,0:25:35.85:0,36,552	0/0:20,0:20:42.28:0,42,694	0/0:38,0:37:95.31:0,95,1244	0/0:13,0:13:30.05:0,30,353	0/0:10,0:9:26.93:0,27,308	0/0:14,0:14:38.71:0,39,316	0/0:17,0:17:35.97:0,36,401	0/0:15,0:15:33:0,33,395	0/0:10,0:11:15.02:0,15,224	0/1:7,2:11:8.57:215,0,9	0/0:13,0:13:36.06:0,36,473	0/1:17,3:24:8.79:417,0,9	1/1:8,2:10:3.58:193,4,0	0/0:16,0:15:45.03:0,45,452	0/0:20,0:19:47.39:0,47,545	0/0:17,0:17:32.73:0,33,392	0/0:8,0:8:20.90:0,21,224	0/0:17,0:17:30.01:0,30,321	0/0:12,0:12:29.94:0,30,332	0/0:13,0:13:36.07:0,36,455	0/0:19,0:19:56.88:0,57,574	0/0:13,0:13:29.72:0,30,377	0/0:16,0:15:35.85:0,36,319
chr10	30017571	.	TCTA	T	3907.08	PASS	AB=0.823;AC=31;AF=0.596;AN=52;BaseQRankSum=5.195;DP=624;FS=2.464;HRun=0;HaplotypeScore=90.9123;InbreedingCoeff=0.4994;MQ=63.88;MQ0=7;MQRankSum=-0.250;QD=9.99;ReadPosRankSum=1.334;VQSLOD=3.0751;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,11:26:21.07:269,21,0	1/1:6,3:10:12:137,12,0	./.	./.	1/1:15,6:22:21.07:271,21,0	1/1:16,11:27:12.45:296,12,0	0/1:14,8:22:41.79:140,0,42	0/0:40,0:40:0:0,0,0	0/0:19,0:19:21.07:0,21,393	0/1:16,6:21:99:157,0,118	1/1:10,6:16:17.79:206,18,0	0/1:17,12:29:35.77:212,0,36	1/1:15,7:22:15.01:176,15,0	1/1:15,13:27:30.05:369,30,0	0/0:22,0:33:30.08:0,30,412	1/1:13,9:22:21.07:272,21,0	0/0:14,0:20:18.06:0,18,235	0/0:12,1:26:0.34:0,0,466	1/1:14,0:13:9.02:96,9,0	1/1:13,15:27:42.05:505,42,0	1/1:6,5:11:21.06:250,21,0	1/1:17,10:27:24.08:310,24,0	0/0:22,0:22:24.08:0,24,445	0/1:17,1:18:11.72:12,0,394	1/1:7,7:14:15.05:194,15,0	0/1:31,2:33:35.02:35,0,589	0/0:35,1:36:15.39:0,15,926	0/0:11,0:10:30.10:0,30,568
chr10	30017747	.	GTT	G	1244.36	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-7.913;DP=670;FS=1.161;HRun=13;HaplotypeScore=113.1121;InbreedingCoeff=0.9286;MQ=73.54;MQ0=4;MQRankSum=-0.967;QD=17.53;ReadPosRankSum=2.946;VQSLOD=2.9355;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:24:27.03:0,27,253	0/0:4,0:5:9.01:0,9,83	0/0:26,0:20:6.08:0,6,244	0/0:21,0:19:27.01:0,27,328	0/0:6,0:22:43.39:0,43,395	0/0:6,0:24:40.61:0,41,388	0/0:8,0:26:21.03:0,21,201	0/0:19,0:36:54.43:0,54,461	0/0:4,0:22:48.06:0,48,465	0/0:20,0:27:55.22:0,55,473	0/0:2,0:17:42.73:0,43,386	0/0:6,0:24:45.03:0,45,420	0/0:12,0:26:59.19:0,59,543	0/0:8,0:30:41.99:0,42,372	1/1:5,25:30:63.05:610,63,0	0/0:19,0:31:69.04:0,69,633	1/1:5,22:26:57.06:551,57,0	1/1:3,10:13:17.97:224,18,0	0/0:9,0:21:37.34:0,37,324	0/0:5,0:21:43.43:0,43,347	0/0:5,0:16:22.39:0,22,204	0/0:6,0:24:51.37:0,51,445	0/0:4,0:20:41.62:0,42,390	0/0:7,0:23:30.35:0,30,272	0/0:4,0:26:48.08:0,48,471	0/0:11,0:36:79.43:0,79,700	0/0:5,0:43:78.07:0,78,728	0/0:1,0:6:12.02:0,12,127
chr10	30017966	.	ATAGCACGTGCT	A	3797.92	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=10.059;DP=605;FS=1.315;HRun=0;HaplotypeScore=186.2460;InbreedingCoeff=0.8964;MQ=66.95;MQ0=0;MQRankSum=-9.481;QD=55.04;ReadPosRankSum=1.937;VQSLOD=3.1110;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:90.29:0,90,4995	0/0:6,0:6:18.05:0,18,753	1/1:2,0:3:1.44:4,1,0	0/0:9,0:9:3.64:0,4,41	0/0:15,0:15:45.14:0,45,2148	0/0:14,0:14:36.12:0,36,1957	0/0:40,0:40:99:0,108,5172	0/0:23,0:23:63.21:0,63,2778	0/0:29,0:29:87.30:0,87,4500	0/0:25,0:25:69.23:0,69,3521	0/0:9,0:9:21.07:0,21,1124	0/0:23,0:23:63.20:0,63,3218	0/0:27,0:27:81.26:0,81,4071	0/0:35,0:35:99:0,102,5427	1/1:2,28:30:66.23:2278,66,0	0/0:37,0:37:99:0,111,5844	1/1:7,17:24:27.01:841,27,0	1/1:3,9:12:24:675,24,0	0/0:20,0:20:57.18:0,57,2696	0/0:26,0:26:78.27:0,78,3844	0/0:42,0:42:99:0,126,6204	0/0:17,0:17:48.16:0,48,2344	0/0:11,0:11:33.11:0,33,1620	0/0:25,0:25:72.23:0,72,3663	0/0:8,0:8:24.08:0,24,997	0/0:27,0:27:68.86:0,69,3469	0/0:29,0:29:84.27:0,84,4212	0/0:7,0:7:21.07:0,21,880
chr10	30018773	.	A	AG	2849.84	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-3.687;DP=676;FS=3.611;HRun=0;HaplotypeScore=67.3393;InbreedingCoeff=0.9696;MQ=95.28;MQ0=0;MQRankSum=-4.270;QD=43.18;ReadPosRankSum=0.197;VQSLOD=4.1932;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,126,1723	0/0:13,0:13:39.13:0,39,545	0/0:38,0:38:99:0,111,1399	0/0:27,0:27:64.89:0,65,802	0/0:23,0:23:69.23:0,69,964	0/0:24,0:24:72.24:0,72,1007	0/0:32,0:32:96.32:0,96,1341	0/0:24,0:24:66.21:0,66,896	0/0:35,0:35:99:0,105,1468	0/0:12,0:12:36.12:0,36,503	0/0:13,0:13:39.13:0,39,544	0/0:29,0:29:87.28:0,87,1200	0/0:29,0:29:78.23:0,78,1054	0/0:24,0:24:69.20:0,69,928	1/1:2,25:27:81.25:1248,81,0	0/0:19,1:20:9.22:0,9,691	1/1:0,26:26:75.26:1198,75,0	1/1:2,11:13:36.08:547,36,0	0/0:13,0:13:39.13:0,39,543	0/0:14,0:14:42.14:0,42,587	0/0:34,0:34:99:0,99,1345	0/0:17,0:17:51.16:0,51,694	0/0:21,0:20:60.19:0,60,824	0/0:31,0:31:93.22:0,93,1255	0/0:27,0:27:81.25:0,81,1112	0/0:33,0:33:99:0,99,1369	0/0:30,0:30:90.27:0,90,1236	0/0:4,0:4:12.04:0,12,168
chr10	30018887	.	A	AC	2891.98	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=1.998;DP=681;FS=9.412;HRun=4;HaplotypeScore=72.0671;InbreedingCoeff=0.9812;MQ=97.02;MQ0=0;MQRankSum=-6.003;QD=34.43;ReadPosRankSum=1.534;VQSLOD=3.9441;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,117,1286	0/0:8,0:8:15.04:0,15,170	0/0:38,0:39:90.08:0,90,958	0/0:38,0:38:34.79:0,35,702	0/0:25,0:25:69.19:0,69,773	0/0:27,0:27:72.16:0,72,802	0/0:28,0:28:78.07:0,78,856	0/0:22,0:22:54.14:0,54,605	0/0:26,0:26:75.18:0,75,829	0/0:18,0:18:54.15:0,54,612	0/0:19,0:19:54.15:0,54,612	0/0:22,0:22:66.14:0,66,726	0/0:29,0:29:87.25:0,87,986	0/0:22,0:22:60.17:0,60,680	1/1:1,36:37:93.31:1272,93,0	0/0:21,0:21:60.15:0,60,668	1/1:1,24:25:69.23:942,69,0	1/1:0,22:22:60.20:821,60,0	0/0:14,0:14:36.10:0,36,408	0/0:13,0:13:39.11:0,39,442	0/0:30,0:30:84.11:0,84,920	0/0:23,0:23:66.17:0,66,738	0/0:19,0:19:51.13:0,51,568	0/0:34,0:34:96.19:0,96,1060	0/0:21,0:21:63.18:0,63,714	0/0:26,0:26:69.20:0,69,782	0/0:27,0:26:81.15:0,81,893	0/0:5,0:5:11.18:0,11,134
chr10	30019396	.	TC	T	16405.71	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=0.358;DP=706;FS=0.518;HRun=7;HaplotypeScore=75.5597;InbreedingCoeff=0.9970;MQ=88.52;MQ0=0;MQRankSum=-7.761;QD=25.67;ReadPosRankSum=4.611;VQSLOD=5.2678;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,53:58:99:1468,144,0	1/1:0,7:7:21.05:214,21,0	0/0:22,0:22:39.11:0,39,468	0/0:27,0:27:72.17:0,72,863	1/1:3,18:21:48.10:490,48,0	1/1:2,20:22:54.12:551,54,0	1/1:2,20:22:57.13:582,57,0	1/1:6,23:29:43.16:576,43,0	0/0:18,0:18:51.16:0,51,640	1/1:3,17:20:51.11:519,51,0	1/1:5,13:18:48.10:488,48,0	1/1:1,27:28:78.18:795,78,0	1/1:2,31:33:93.21:947,93,0	1/1:1,25:26:69.16:704,69,0	1/1:1,25:26:66.15:673,66,0	1/1:2,28:30:72.16:734,72,0	1/1:3,31:34:87.20:888,87,0	1/1:4,21:25:60.13:612,60,0	1/1:3,22:25:66.14:673,66,0	1/1:2,19:21:60.13:611,60,0	1/1:2,35:37:99:1010,99,0	1/1:1,26:27:69.15:702,69,0	1/1:3,24:27:66.10:661,66,0	1/1:5,29:34:72.16:734,72,0	1/1:1,19:20:48.11:489,48,0	1/1:2,17:19:51.11:520,51,0	1/1:3,20:23:54.12:551,54,0	1/1:0,7:7:21.05:214,21,0
chr10	30023754	.	T	TAC	2031.14	PASS	AB=0.863;AC=24;AF=0.480;AN=50;BaseQRankSum=-4.121;DP=682;FS=2.147;HRun=0;HaplotypeScore=110.6583;InbreedingCoeff=-0.5403;MQ=53.24;MQ0=17;MQRankSum=2.833;QD=3.89;ReadPosRankSum=-2.276;VQSLOD=2.5459;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:28,15:44:49.33:217,0,49	./.	./.	./.	0/1:14,9:24:49.13:78,0,49	0/1:23,0:24:51.72:118,0,52	0/1:24,1:24:8.88:154,0,9	0/1:31,0:30:13.62:14,0,14	0/1:14,7:20:27.49:352,0,27	0/1:19,0:22:16:16,0,37	0/1:13,0:13:12.56:13,0,27	0/1:20,7:27:20.63:70,0,21	0/1:15,12:27:43.72:239,0,44	0/0:20,0:20:11.45:0,11,110	0/0:24,0:32:7.69:0,8,55	1/1:19,3:21:8.82:142,9,0	0/0:10,0:16:2.72:0,3,31	0/0:11,0:16:2.80:0,3,13	0/1:13,0:13:26.22:36,0,26	0/1:11,5:16:15.93:123,0,16	0/1:46,2:48:53.20:126,0,53	0/1:24,0:24:6.71:7,0,167	0/1:9,4:13:13.71:38,0,14	0/1:32,17:47:66:135,0,66	0/1:16,4:21:34.91:35,0,50	1/1:17,5:22:1.60:145,2,0	0/1:23,5:28:71.21:71,0,96	1/1:5,1:5:3.01:45,3,0
chr10	30024090	.	G	GTTTTTT	11707.18	PASS	AB=0.690;AC=49;AF=0.875;AN=56;BaseQRankSum=-0.496;DP=476;FS=8.740;HRun=12;HaplotypeScore=135.5569;InbreedingCoeff=0.4243;MQ=73.65;MQ0=2;MQRankSum=-5.647;QD=26.37;ReadPosRankSum=-2.621;VQSLOD=1.7902;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:14,1:19:29.12:602,29,0	1/1:5,5:12:21.07:540,21,0	0/1:28,0:23:37.72:38,0,196	0/0:14,0:14:3.54:0,4,25	1/1:12,3:14:16.30:403,16,0	1/1:14,6:25:36.12:955,36,0	1/1:10,2:13:19.88:469,20,0	1/1:23,1:25:24.06:641,24,0	0/0:3,0:17:27.79:0,28,189	1/1:14,3:18:30.05:634,30,0	1/1:8,3:15:18.06:532,18,0	1/1:13,0:14:18.05:410,18,0	1/1:16,0:15:18.06:378,18,0	1/1:13,1:15:18.91:377,19,0	1/1:3,0:20:2.27:57,2,0	1/1:13,6:19:30.10:833,30,0	0/1:2,0:8:5.45:8,0,5	0/1:0,0:19:1.12:33,0,1	1/1:9,3:12:26.43:560,26,0	1/1:14,0:22:32.05:568,32,0	1/1:10,0:10:13.60:283,14,0	1/1:9,0:14:23.44:474,23,0	1/1:14,3:21:30.10:780,30,0	1/1:7,0:11:6.02:131,6,0	1/1:14,3:22:24.08:580,24,0	1/1:15,2:22:34.93:778,35,0	1/1:17,0:21:29.68:582,30,0	1/1:2,0:6:3.01:66,3,0
chr10	30026029	.	AG	A	603.81	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.728;DP=589;FS=6.281;HRun=2;HaplotypeScore=273.7575;InbreedingCoeff=0.9037;MQ=81.17;MQ0=0;MQRankSum=-4.664;QD=31.78;ReadPosRankSum=2.751;VQSLOD=2.4208;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:74.30:0,74,1044	0/0:17,0:17:44.92:0,45,589	0/0:30,0:30:87.26:0,87,1256	0/0:22,0:22:63.12:0,63,889	0/0:28,0:28:57.19:0,57,841	0/0:23,0:23:59.38:0,59,818	0/0:19,0:19:48.12:0,48,690	0/0:22,0:22:60.20:0,60,881	1/1:0,19:19:54.18:699,54,0	0/0:22,0:22:66.21:0,66,968	0/0:14,0:14:34.51:0,35,453	0/0:25,0:25:74.92:0,75,1083	0/0:22,0:22:62.53:0,63,870	0/0:12,0:12:33.08:0,33,452	0/0:33,0:33:83.18:0,83,1112	0/0:26,0:26:71.81:0,72,999	0/0:27,0:27:60.15:0,60,843	0/0:17,0:17:48.09:0,48,675	0/0:13,0:13:39.08:0,39,557	0/0:23,0:23:56.78:0,57,807	0/0:16,0:16:27.09:0,27,403	0/0:23,0:23:62.88:0,63,903	0/0:18,0:18:41.50:0,42,582	0/0:17,0:17:31.79:0,32,397	0/0:16,0:16:38.72:0,39,545	0/0:26,0:26:78.25:0,78,1101	0/0:23,0:23:68.56:0,69,942	0/0:3,0:3:6.02:0,6,90
chr10	30026036	.	TCCTTTACGA	T	33733.97	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=7.265;DP=561;FS=5.142;HRun=0;HaplotypeScore=228.0823;InbreedingCoeff=0.9660;MQ=84.66;MQ0=0;MQRankSum=-11.780;QD=66.80;ReadPosRankSum=6.524;VQSLOD=4.2634;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,28:33:72.72:2097,73,0	1/1:0,14:14:30.10:918,30,0	0/0:34,0:34:99:0,99,4026	0/0:22,0:22:60.17:0,60,2462	1/1:2,25:27:38.87:1144,39,0	1/1:3,15:18:36.12:1137,36,0	1/1:2,19:21:42.14:1288,42,0	1/1:10,11:21:30.09:831,30,0	1/1:3,16:19:51.18:1523,51,0	1/1:4,16:20:48.16:1517,48,0	1/1:0,15:15:27.09:830,27,0	1/1:2,24:26:66.23:2086,66,0	1/1:1,21:22:57.20:1801,57,0	1/1:0,9:9:27.09:853,27,0	1/1:0,28:28:81.28:2521,81,0	1/1:3,20:23:60.21:1877,60,0	1/1:5,20:25:36.08:1053,36,0	1/1:2,14:16:39.13:1233,39,0	1/1:3,9:12:27.09:853,27,0	1/1:2,22:24:57.20:1644,57,0	1/1:3,12:15:23.29:588,23,0	1/1:2,20:22:45.15:1354,45,0	1/1:3,14:17:24.08:713,24,0	1/1:1,14:15:27.56:848,28,0	1/1:2,14:16:39.13:1190,39,0	1/1:1,23:24:69.24:2135,69,0	1/1:3,17:20:45.15:1422,45,0	1/1:0,3:3:9.03:275,9,0
chr10	30026524	.	CCCACTGGAGACCG	C	6110.01	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=11.305;DP=743;FS=3.257;HRun=0;HaplotypeScore=310.5877;InbreedingCoeff=0.9018;MQ=92.02;MQ0=0;MQRankSum=-11.484;QD=91.19;ReadPosRankSum=2.109;VQSLOD=4.3413;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:55:99:0,169,10475	0/0:10,0:10:27.09:0,27,1513	0/0:35,0:35:99:0,99,5674	0/0:29,0:29:71.24:0,71,3902	0/0:29,0:29:84.27:0,84,5098	0/0:17,0:17:51.15:0,51,2868	0/0:27,0:27:81.28:0,81,4942	0/0:33,0:33:90.31:0,90,4911	0/0:20,0:20:54.19:0,54,3478	0/0:29,0:29:80.85:0,81,4795	0/0:18,0:18:47.57:0,48,2987	0/0:43,0:43:99:0,126,7698	0/0:25,0:25:66.21:0,66,3823	0/0:29,0:29:81.26:0,81,5005	1/1:4,39:43:99:4672,117,0	0/0:31,0:31:90.31:0,90,5579	1/1:4,3:7:6.02:240,6,0	1/1:4,13:17:30.10:1198,30,0	0/0:24,0:24:69.24:0,69,4125	0/0:24,0:24:69.22:0,69,4047	0/0:35,0:35:93.28:0,93,5360	0/0:18,0:18:51.18:0,51,3238	0/0:16,0:16:45.15:0,45,2896	0/0:34,0:34:96.33:0,96,6209	0/0:32,0:32:90.31:0,90,5771	0/0:32,0:32:90.30:0,90,5626	0/0:29,0:29:81.28:0,81,5262	0/0:1,0:1:3.01:0,3,197
chr10	30027041	.	T	TAA	1458.31	PASS	AB=0.796;AC=8;AF=0.143;AN=56;BaseQRankSum=-1.700;DP=614;FS=1.086;HRun=11;HaplotypeScore=88.7728;InbreedingCoeff=0.7402;MQ=81.14;MQ0=0;MQRankSum=-1.416;QD=15.19;ReadPosRankSum=0.256;VQSLOD=2.5083;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:53.98:0,54,511	0/0:13,0:14:29.74:0,30,274	0/0:22,0:22:24.47:0,24,204	0/1:15,0:15:3.54:4,0,67	0/0:31,0:36:70.69:0,71,651	0/0:17,0:19:32.95:0,33,363	0/0:20,0:20:47.93:0,48,451	0/0:36,0:36:65.95:0,66,631	0/1:5,0:16:44.75:45,0,51	0/0:22,0:22:47.93:0,48,458	0/0:18,0:19:38.99:0,39,427	0/0:17,0:17:47.99:0,48,449	0/0:16,0:17:41.74:0,42,390	0/0:17,0:19:38.71:0,39,411	1/1:2,15:20:41.62:544,42,0	0/0:21,0:21:40.21:0,40,454	1/1:3,23:27:42.14:608,42,0	1/1:6,10:18:32.08:408,32,0	0/0:32,0:32:80.91:0,81,751	0/0:22,0:23:50.94:0,51,538	0/0:21,0:23:50.47:0,50,453	0/0:27,0:27:57.04:0,57,553	0/0:19,0:21:44.68:0,45,463	0/0:14,0:15:41.74:0,42,373	0/0:25,0:25:63.07:0,63,611	0/0:25,0:25:51.03:0,51,490	0/0:31,0:32:75.66:0,76,712	0/0:7,0:8:14.96:0,15,195
chr10	30027373	.	A	ATT	3625.59	PASS	AB=1.000;AC=51;AF=0.911;AN=56;BaseQRankSum=4.195;DP=509;FS=3.386;HRun=7;HaplotypeScore=113.5760;InbreedingCoeff=0.7788;MQ=77.77;MQ0=1;MQRankSum=-7.044;QD=7.71;ReadPosRankSum=3.050;VQSLOD=-0.0467;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:30:39.70:199,40,0	1/1:8,0:8:13.44:59,13,0	0/0:28,0:27:64.05:0,64,683	0/0:11,0:11:11.23:0,11,182	1/1:18,0:18:27.99:125,28,0	1/1:27,2:29:43.57:259,44,0	1/1:21,0:21:35.23:164,35,0	1/1:15,0:15:28.07:141,28,0	0/1:15,0:15:6.58:7,0,7	1/1:22,0:22:42.15:212,42,0	1/1:15,1:16:28.99:164,29,0	1/1:17,0:17:34.98:154,35,0	1/1:20,0:20:27.65:135,28,0	1/1:11,0:11:16.82:90,17,0	1/1:17,0:17:15.75:71,16,0	1/1:16,0:16:32.73:150,33,0	1/1:30,0:30:44.81:215,45,0	1/1:21,0:21:31.54:130,32,0	1/1:14,0:13:20.73:144,21,0	1/1:11,0:11:24.50:126,24,0	1/1:21,0:21:15.82:63,16,0	1/1:16,0:16:32.86:144,33,0	1/1:14,0:14:33.22:186,33,0	1/1:31,0:31:44.03:181,44,0	1/1:13,2:16:35.20:215,35,0	1/1:13,0:13:27.39:121,27,0	1/1:22,0:22:27.41:128,27,0	1/1:6,0:6:8.52:42,9,0
chr10	30027380	.	T	TTGGG	13990.87	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-0.810;DP=535;FS=6.901;HRun=0;HaplotypeScore=97.2366;InbreedingCoeff=0.9429;MQ=77.47;MQ0=1;MQRankSum=-8.888;QD=28.32;ReadPosRankSum=4.785;VQSLOD=4.2380;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,0:33:62.81:853,63,0	1/1:2,0:13:17.09:181,17,0	0/0:29,0:28:82.84:0,83,1030	0/0:12,0:12:13.88:0,14,258	1/1:1,0:19:44.83:533,45,0	1/1:2,0:29:48.16:686,48,0	1/1:1,0:23:42.14:614,42,0	1/1:1,0:17:45:572,45,0	1/1:0,0:18:22.01:144,22,0	1/1:0,0:20:51.11:680,51,0	1/1:1,0:16:38.93:494,39,0	1/1:0,0:20:39.13:582,39,0	1/1:0,0:18:30.10:445,30,0	1/1:0,0:13:18.06:267,18,0	1/1:2,11:17:21.07:555,21,0	1/1:0,0:16:36.12:554,36,0	1/1:1,24:32:51.17:1260,51,0	1/1:0,16:21:36.12:979,36,0	1/1:0,0:15:39.03:462,39,0	1/1:0,0:12:29.96:372,30,0	1/1:0,0:22:18.06:268,18,0	1/1:1,0:16:39.56:551,40,0	1/1:1,0:13:36.07:489,36,0	1/1:3,0:32:54.17:780,54,0	1/1:3,0:17:39.09:575,39,0	1/1:0,0:15:44.99:525,45,0	1/1:0,0:20:30.10:437,30,0	1/1:0,0:6:9.03:134,9,0
chr10	30027497	.	TG	T	15288.91	PASS	AB=1.000;AC=53;AF=0.946;AN=56;BaseQRankSum=-3.452;DP=551;FS=12.402;HRun=4;HaplotypeScore=151.4081;InbreedingCoeff=0.5996;MQ=70.77;MQ0=0;MQRankSum=-0.626;QD=28.31;ReadPosRankSum=3.969;VQSLOD=2.9823;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,27:28:66.20:790,66,0	1/1:0,16:16:45.14:535,45,0	0/1:9,0:9:29.02:29,0,109	0/0:6,1:11:14.70:0,15,165	1/1:1,14:15:39.12:462,39,0	1/1:0,23:23:63.19:750,63,0	1/1:0,30:30:78.24:934,78,0	1/1:1,11:12:30.09:358,30,0	1/1:2,18:20:51.16:611,51,0	1/1:2,15:17:45.14:538,45,0	1/1:1,7:8:18.05:212,18,0	1/1:3,26:29:72.22:863,72,0	1/1:0,21:21:54.16:645,54,0	1/1:1,28:29:72.22:861,72,0	1/1:17,1:18:11.22:166,11,0	1/1:0,24:24:69.21:826,69,0	1/1:24,0:24:43.45:248,43,0	1/1:25,1:26:59.98:375,60,0	1/1:2,14:16:42.13:502,42,0	1/1:0,17:17:48.15:573,48,0	1/1:3,28:31:74.64:920,75,0	1/1:0,12:12:33.10:395,33,0	1/1:1,19:20:59.51:667,60,0	1/1:0,27:27:69.21:822,69,0	1/1:0,20:20:51.16:610,51,0	1/1:1,23:24:69.20:811,69,0	1/1:1,19:20:54.16:643,54,0	1/1:0,4:4:12.04:144,12,0
chr10	30028125	.	CGCTCTCCAG	C	4884.84	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=5.770;DP=844;FS=7.943;HRun=0;HaplotypeScore=269.9184;InbreedingCoeff=0.9110;MQ=86.92;MQ0=0;MQRankSum=-11.414;QD=50.88;ReadPosRankSum=-1.450;VQSLOD=3.2993;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:56:99:0,139,5720	0/0:6,0:6:18.06:0,18,682	0/0:36,0:36:99:0,108,4236	0/0:24,0:24:65.76:0,66,2594	0/0:25,0:25:75.26:0,75,2895	0/0:20,0:20:33.21:0,33,2164	0/0:37,0:37:94.89:0,95,3587	0/0:27,0:27:48.88:0,49,2265	0/0:31,0:31:93.31:0,93,4020	0/0:23,0:23:66.32:0,66,2146	0/0:22,0:22:63.08:0,63,2252	0/0:41,0:41:58.25:0,58,3627	0/0:31,0:31:38.89:0,39,2635	0/0:43,0:43:99:0,129,4615	1/1:0,42:42:78.27:2518,78,0	0/0:39,0:39:99:0,115,4234	1/1:0,32:32:45.15:1456,45,0	1/1:0,22:22:32.94:910,33,0	0/0:29,0:29:55.24:0,55,2481	0/0:18,0:18:48.03:0,48,1631	0/0:48,0:48:99:0,119,4730	0/0:30,0:30:63.94:0,64,2967	0/0:26,0:26:78.25:0,78,2661	0/0:55,0:55:99:0,141,5826	0/0:16,0:16:44.82:0,45,1632	0/0:28,0:28:58.29:0,58,2858	0/0:29,0:28:87.30:0,87,3156	0/0:8,0:8:0.08:0,0,523
chr10	30028377	.	A	AT	13502.82	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=6.638;DP=555;FS=2.792;HRun=7;HaplotypeScore=73.6372;InbreedingCoeff=0.9670;MQ=71.11;MQ0=0;MQRankSum=-0.233;QD=28.91;ReadPosRankSum=1.180;VQSLOD=5.5273;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,17:18:36.11:435,36,0	1/1:0,7:7:18.06:217,18,0	0/0:7,0:7:8.95:0,9,71	0/0:8,0:7:11.56:0,12,74	1/1:3,25:28:75.07:853,75,0	1/1:1,24:25:66.20:797,66,0	1/1:0,14:14:42.13:507,42,0	1/1:4,21:25:60.13:677,60,0	0/0:9,0:9:24:0,24,219	1/1:3,20:23:60.16:702,60,0	1/1:3,32:35:96.10:1088,96,0	1/1:4,19:23:51.16:616,51,0	1/1:3,20:23:50.99:616,51,0	1/1:4,18:22:46.37:641,46,0	0/0:20,0:20:54.08:0,54,521	1/1:2,20:22:51.16:616,51,0	0/0:29,0:29:78:0,78,723	0/0:15,0:15:38.98:0,39,355	1/1:4,10:14:30.06:338,30,0	1/1:1,27:28:78.21:925,78,0	1/1:1,16:17:48.15:579,48,0	1/1:1,22:23:54.04:616,54,0	1/1:1,18:19:54.17:652,54,0	1/1:2,13:15:39.12:470,39,0	1/1:0,31:31:75.23:906,75,0	1/1:1,15:16:45.05:491,45,0	1/1:5,23:28:54.17:652,54,0	1/1:5,6:11:9.03:109,9,0
chr10	30028756	.	G	GTA	24574.26	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=0.501;DP=691;FS=6.472;HRun=0;HaplotypeScore=100.7442;InbreedingCoeff=0.9980;MQ=86.28;MQ0=0;MQRankSum=-5.327;QD=44.12;ReadPosRankSum=3.630;VQSLOD=6.5760;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,40:40:99:1924,105,0	1/1:0,8:9:21.07:385,21,0	0/0:20,0:20:46.42:0,46,626	0/0:28,0:28:68.31:0,68,929	1/1:0,20:21:48.16:880,48,0	1/1:1,25:26:60.21:1100,60,0	1/1:2,20:23:51.17:935,51,0	1/1:1,38:40:99:2008,117,0	0/0:20,0:20:60.20:0,60,858	1/1:3,15:18:45.15:825,45,0	1/1:2,36:39:87.30:1578,87,0	1/1:0,30:31:81.28:1476,81,0	1/1:1,29:32:63.22:1152,63,0	1/1:0,21:21:54.19:989,54,0	0/0:34,0:34:99:0,99,1362	1/1:0,25:25:66.23:1210,66,0	0/0:23,0:23:60.15:0,60,802	0/0:9,0:9:27.07:0,27,365	1/1:2,30:33:87.21:1497,87,0	1/1:1,28:29:75.26:1373,75,0	1/1:1,23:25:51.17:935,51,0	1/1:2,12:15:30.10:550,30,0	1/1:1,26:27:60.20:1100,60,0	1/1:3,24:28:54.19:990,54,0	1/1:2,14:16:42.14:770,42,0	1/1:1,22:24:72.21:1256,72,0	1/1:3,24:28:69.24:1258,69,0	1/1:0,7:7:21.07:385,21,0
chr10	30029067	.	TTGTGTGTGTGTG	T	1531.19	PASS	AB=0.944;AC=6;AF=0.111;AN=54;BaseQRankSum=-1.196;DP=769;FS=4.345;HRun=0;HaplotypeScore=272.4463;InbreedingCoeff=0.5028;MQ=72.90;MQ0=8;MQRankSum=-4.992;QD=13.67;ReadPosRankSum=2.411;VQSLOD=2.1874;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:36,0:35:40.11:40,0,1255	./.	0/0:29,0:21:3.01:0,3,38	0/0:39,0:30:3.01:0,3,36	0/0:20,0:20:9.03:0,9,453	0/0:26,0:26:24.08:0,24,1127	0/0:25,0:25:17.90:0,18,677	0/0:48,0:47:55.94:0,56,1405	0/0:17,0:18:33.11:0,33,436	0/0:35,0:35:49.88:0,50,1716	0/0:23,0:24:21.07:0,21,891	0/0:34,0:33:36.12:0,36,1591	0/0:29,0:29:36.51:0,37,1586	0/0:39,0:39:36.12:0,36,1643	1/1:21,14:37:23.03:690,23,0	0/0:33,0:34:39.13:0,39,1759	1/1:20,2:23:21.03:481,21,0	0/1:14,2:16:22.42:454,0,22	0/0:24,0:22:23.97:0,24,809	0/0:25,0:24:15.05:0,15,728	0/0:42,0:42:34.23:0,34,1639	0/0:19,0:19:33.11:0,33,1361	0/0:23,0:23:23.98:0,24,1049	0/0:36,0:36:60.07:0,60,2914	0/0:12,0:12:9.03:0,9,407	0/0:36,0:36:53.88:0,54,1812	0/0:24,0:23:18.06:0,18,841	0/0:6,0:6:12.04:0,12,489
chr10	30029074	.	T	TGC	6624.59	PASS	AB=0.994;AC=36;AF=0.643;AN=56;BaseQRankSum=3.757;DP=766;FS=0.000;HRun=0;HaplotypeScore=158.4204;InbreedingCoeff=0.3087;MQ=64.47;MQ0=14;MQRankSum=3.425;QD=10.84;ReadPosRankSum=3.156;VQSLOD=4.6848;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:35,1:35:35.90:183,0,36	1/1:12,0:11:2.92:17,3,0	0/0:26,0:17:41.26:0,41,473	0/0:36,0:21:53.59:0,54,511	1/1:19,0:19:5.85:152,6,0	0/1:33,0:33:87.38:178,0,87	1/1:23,0:23:3.96:227,4,0	0/1:49,1:49:38.42:674,0,38	0/0:23,0:23:59.78:0,60,498	1/1:38,0:38:29.67:698,30,0	0/1:25,0:25:16.61:17,0,91	1/1:34,0:33:18.73:392,19,0	0/1:30,0:30:17.58:251,0,18	0/1:37,0:37:0.27:307,0,0	0/0:34,0:34:68.56:0,69,526	0/1:35,0:34:10.27:333,0,10	0/0:21,0:21:51.14:0,51,340	0/0:15,0:15:36.07:0,36,257	1/1:26,0:24:34.69:422,35,0	1/1:19,1:19:29.48:264,29,0	0/1:46,0:46:86.93:246,0,87	1/1:16,0:16:25.70:337,26,0	1/1:20,0:20:26.64:316,27,0	1/1:38,1:39:2.29:554,2,0	1/1:14,0:14:6.24:108,6,0	1/1:32,1:33:26.28:650,26,0	1/1:18,0:17:5:208,5,0	1/1:7,0:7:12.04:92,12,0
chr10	30029075	.	G	GCC	11792.92	PASS	AB=0.561;AC=34;AF=0.607;AN=56;BaseQRankSum=-2.012;DP=783;FS=7.465;HRun=0;HaplotypeScore=141.0435;InbreedingCoeff=0.1737;MQ=62.56;MQ0=14;MQRankSum=1.993;QD=18.75;ReadPosRankSum=3.716;VQSLOD=4.7763;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:11,26:37:84.17:275,0,84	1/1:4,7:11:3.01:36,3,0	0/0:25,0:16:36.15:0,36,680	0/0:36,0:19:54.15:0,54,794	0/1:4,15:19:3.16:302,0,3	0/1:8,22:34:99:294,0,129	0/1:2,23:25:13.63:367,0,14	0/1:19,31:53:94.32:1360,0,94	0/0:23,0:23:60.12:0,60,786	0/1:5,33:39:16.81:1329,0,17	0/1:9,15:25:45.55:71,0,46	1/1:6,28:34:22.30:644,22,0	1/1:4,26:30:3.92:462,4,0	1/1:5,31:38:3.76:530,4,0	0/0:33,0:33:68.90:0,69,838	1/1:6,27:33:1.33:544,1,0	0/0:22,0:22:52.27:0,52,595	0/0:15,0:15:39.47:0,39,453	1/1:3,20:24:35.40:806,35,0	1/1:5,14:19:29.81:416,30,0	0/1:12,31:49:99:459,0,110	1/1:12,4:17:42.95:633,43,0	1/1:0,16:19:26.82:522,27,0	1/1:9,30:42:3.37:950,3,0	0/1:1,12:15:12.69:171,0,13	1/1:4,26:33:29.30:1130,29,0	0/1:3,14:17:15.51:303,0,16	1/1:6,1:7:14.89:189,15,0
chr10	30029815	.	TTCTTATTGGATC	T	41011.31	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=16.087;DP=683;FS=6.083;HRun=0;HaplotypeScore=291.2215;InbreedingCoeff=0.9865;MQ=81.79;MQ0=0;MQRankSum=-16.777;QD=77.67;ReadPosRankSum=5.643;VQSLOD=3.5944;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,21:33:48.16:1818,48,0	1/1:0,10:10:30.10:1138,30,0	0/0:30,0:30:84.27:0,84,4342	0/0:24,0:24:69.24:0,69,3619	1/1:3,34:37:87.30:3117,87,0	1/1:2,18:20:45.15:1710,45,0	1/1:5,12:17:27.09:1026,27,0	1/1:11,20:31:60.19:2000,60,0	0/0:27,0:27:78.27:0,78,4605	1/1:9,22:31:63.17:1971,63,0	1/1:1,25:26:63.22:2330,63,0	1/1:7,30:37:87.30:3260,87,0	1/1:2,21:23:45.15:1707,45,0	1/1:4,30:34:84.29:3183,84,0	0/0:38,0:38:99:0,114,6812	1/1:2,29:31:78.27:2960,78,0	0/0:26,0:26:78.27:0,78,4553	0/0:10,0:10:27.08:0,27,1445	1/1:5,15:20:45.11:1382,45,0	1/1:4,22:26:54.14:1958,54,0	1/1:5,10:15:24.08:810,24,0	1/1:6,16:22:48.16:1784,48,0	1/1:2,17:19:51.17:1861,51,0	1/1:7,12:19:21.07:675,21,0	1/1:4,14:18:39.13:1482,39,0	1/1:7,22:29:63.22:2353,63,0	1/1:4,20:24:57.20:2143,57,0	1/1:2,4:6:9.03:342,9,0
chr10	30029988	.	AT	A	14622.80	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=5.898;DP=745;FS=14.513;HRun=8;HaplotypeScore=83.2811;InbreedingCoeff=0.9626;MQ=81.01;MQ0=1;MQRankSum=-6.126;QD=24.49;ReadPosRankSum=2.744;VQSLOD=4.2723;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,33:36:90.14:869,90,0	1/1:0,7:7:18.03:174,18,0	0/0:24,0:23:45.07:0,45,506	0/0:22,0:23:26.86:0,27,506	1/1:1,39:40:99:1070,111,0	1/1:1,23:24:57.09:549,57,0	1/1:0,15:15:42.07:406,42,0	1/1:6,22:28:66.10:636,66,0	0/0:26,0:26:64.28:0,64,265	1/1:3,38:41:99:1065,111,0	1/1:1,19:20:57.09:549,57,0	1/1:1,30:31:78.12:752,78,0	1/1:2,29:31:81.13:782,81,0	1/1:4,30:34:90.14:869,90,0	0/0:33,0:33:93.28:0,93,1110	1/1:3,24:27:69.11:666,69,0	0/0:27,1:28:46.25:0,46,824	0/0:14,0:14:39.10:0,39,458	1/1:5,17:22:48.06:459,48,0	1/1:1,26:27:75.11:724,75,0	1/1:2,30:32:78.12:753,78,0	1/1:3,31:34:80.41:780,80,0	1/1:1,17:18:48.05:463,48,0	1/1:3,15:18:2.83:311,3,0	1/1:4,26:30:78.12:753,78,0	1/1:6,26:32:78.11:747,78,0	1/1:5,29:34:87.14:839,87,0	1/1:2,14:16:42.07:406,42,0
chr10	30029991	.	T	TA	958.36	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-7.577;DP=737;FS=1.644;HRun=0;HaplotypeScore=137.9323;InbreedingCoeff=0.9910;MQ=81.78;MQ0=1;MQRankSum=0.487;QD=36.86;ReadPosRankSum=-0.752;VQSLOD=2.9770;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:93.65:0,94,547	0/0:8,0:8:17.55:0,18,102	0/0:23,0:22:54.12:0,54,674	0/0:25,0:25:49.82:0,50,716	0/0:41,0:41:99:0,120,706	0/0:24,0:24:58.57:0,59,347	0/0:16,0:16:43.94:0,44,263	0/0:26,0:26:73.09:0,73,436	1/1:1,25:26:72.24:1053,72,0	0/0:39,0:39:99:0,111,651	0/0:20,0:20:58.24:0,58,340	0/0:31,0:31:79.02:0,79,466	0/0:31,0:31:84.94:0,85,510	0/0:33,0:33:96.71:0,97,582	0/0:34,0:34:99:0,102,1358	0/0:25,0:25:70.25:0,70,410	0/0:28,0:28:78.12:0,78,1032	0/0:14,0:14:42.11:0,42,552	0/0:22,0:22:58.67:0,59,358	0/0:29,0:29:81.75:0,82,489	0/0:30,0:30:76.02:0,76,440	0/0:34,0:34:92.67:0,93,555	0/0:19,0:19:52.46:0,52,317	0/0:18,0:18:44.11:0,44,297	0/0:31,0:31:88.04:0,88,549	0/0:27,0:27:78.69:0,79,455	0/0:32,0:32:90.75:0,91,532	0/0:16,0:16:46.58:0,47,264
chr10	30030172	.	ATGG	A	18749.82	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=14.527;DP=748;FS=0.784;HRun=0;HaplotypeScore=175.0514;InbreedingCoeff=0.9947;MQ=71.28;MQ0=1;MQRankSum=-5.184;QD=31.15;ReadPosRankSum=3.465;VQSLOD=5.2272;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,15:17:36.05:506,36,0	1/1:0,13:13:27.09:405,27,0	0/0:26,0:23:39.12:0,39,670	0/0:25,0:25:47.41:0,47,1023	1/1:11,24:35:66.14:963,66,0	1/1:11,16:27:63.15:864,63,0	1/1:4,15:19:30.10:451,30,0	1/1:16,11:28:51.07:653,51,0	0/0:23,0:23:66.20:0,66,1322	1/1:9,29:38:87.19:1191,87,0	1/1:5,29:34:78.26:1134,78,0	1/1:4,25:29:60.20:902,60,0	1/1:8,32:40:84.28:1262,84,0	1/1:3,40:43:90.30:1337,90,0	0/0:29,0:29:72.23:0,72,1476	1/1:5,29:34:84.28:1260,84,0	0/0:29,0:29:78.24:0,78,1552	0/0:14,0:14:42.12:0,42,809	1/1:8,5:13:18.03:247,18,0	1/1:3,26:29:60.20:901,60,0	1/1:6,24:30:66.22:985,66,0	1/1:13,21:34:78.08:1056,78,0	1/1:4,24:28:63.21:946,63,0	1/1:0,14:14:33.11:496,33,0	1/1:2,23:25:63.21:938,63,0	1/1:11,20:31:60.11:767,60,0	1/1:1,34:35:84.28:1262,84,0	1/1:0,6:6:15.05:225,15,0
chr10	30030183	.	GGT	G	1231.49	PASS	AB=0.993;AC=27;AF=0.482;AN=56;BaseQRankSum=17.719;DP=698;FS=0.000;HRun=0;HaplotypeScore=211.9094;InbreedingCoeff=-0.2525;MQ=69.54;MQ0=1;MQRankSum=-3.118;QD=2.22;ReadPosRankSum=12.895;VQSLOD=-0.4421;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:15:1.62:39,2,0	0/1:14,0:14:17.50:34,0,17	0/0:20,0:17:44.46:0,44,696	0/0:26,0:26:68.30:0,68,1149	0/1:28,2:30:47:81,0,47	0/1:24,0:24:52.93:53,0,82	0/1:17,0:17:34.79:35,0,49	0/1:24,0:24:6.39:6,0,261	0/0:27,0:27:81.01:0,81,1457	0/1:34,0:34:67.07:67,0,149	0/1:32,1:33:74.90:75,0,99	0/1:29,0:29:70.33:70,0,103	0/1:35,0:35:14.52:109,0,15	0/1:42,0:42:15.06:108,0,15	0/0:24,0:24:72.25:0,72,1390	0/1:32,0:32:12.55:107,0,13	0/0:31,0:31:93.28:0,93,1648	0/0:15,0:15:42.14:0,42,791	0/1:6,0:6:4.84:18,0,5	1/1:28,0:28:4.69:84,5,0	1/1:25,0:25:7.51:90,8,0	0/1:29,0:29:63.12:63,0,101	0/1:27,1:28:26.43:83,0,26	0/1:15,0:15:11.31:44,0,11	1/1:24,0:24:5.71:84,6,0	0/1:24,0:25:23.71:24,0,152	0/1:40,0:40:96.79:97,0,150	1/1:6,0:6:10.19:31,10,0
chr10	30031139	.	C	CTT	11590.24	PASS	AB=1.000;AC=43;AF=0.768;AN=56;BaseQRankSum=13.712;DP=638;FS=7.449;HRun=4;HaplotypeScore=101.2490;InbreedingCoeff=0.9061;MQ=84.83;MQ0=4;MQRankSum=-3.899;QD=24.30;ReadPosRankSum=4.013;VQSLOD=2.7029;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:24,1:25:57.14:643,57,0	1/1:12,1:13:36.10:458,36,0	0/0:31,0:31:66.14:0,66,796	0/0:21,0:21:50.95:0,51,580	1/1:19,1:20:30.18:511,30,0	1/1:14,1:15:41.68:427,42,0	1/1:30,0:30:72.12:731,72,0	1/1:21,1:22:51.04:475,51,0	0/0:24,0:24:72.22:0,72,944	1/1:21,0:21:47.95:426,48,0	1/1:11,0:10:26.90:245,27,0	1/1:29,2:31:50.34:763,50,0	1/1:29,0:28:63.15:670,63,0	1/1:38,0:38:59.34:839,59,0	0/0:41,0:41:99:0,120,1564	1/1:40,0:40:43.44:819,43,0	0/0:24,0:24:66.21:0,66,878	0/0:20,0:20:57.17:0,57,742	1/1:14,0:13:4.50:254,5,0	1/1:13,1:14:36.04:383,36,0	0/1:18,0:18:2.72:357,0,3	1/1:20,0:20:57.11:570,57,0	1/1:13,1:14:33.07:360,33,0	1/1:21,0:21:48.11:495,48,0	1/1:24,0:24:63.13:651,63,0	1/1:17,0:16:18.18:373,18,0	1/1:30,0:30:75.17:791,75,0	1/1:10,0:10:30.08:351,30,0
chr10	30031142	.	T	TTA	20776.99	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-12.508;DP=658;FS=10.040;HRun=0;HaplotypeScore=74.5923;InbreedingCoeff=0.9996;MQ=83.97;MQ0=4;MQRankSum=-4.783;QD=41.89;ReadPosRankSum=3.379;VQSLOD=6.3624;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,25:26:57.20:1036,57,0	1/1:2,12:14:36.12:644,36,0	0/0:31,0:31:75.19:0,75,1012	0/0:20,0:20:47.32:0,47,613	1/1:4,19:23:57.06:930,57,0	1/1:2,14:16:42.14:746,42,0	1/1:2,29:32:72.25:1300,72,0	1/1:5,17:23:51.17:916,51,0	0/0:24,0:24:72.24:0,72,1031	1/1:3,16:19:48.16:860,48,0	1/1:2,12:13:30.01:455,30,0	1/1:6,27:33:72.24:1285,72,0	1/1:2,28:29:62.93:1153,63,0	1/1:2,33:35:81.28:1481,81,0	0/0:44,0:44:99:0,123,1740	1/1:4,36:40:84.29:1539,84,0	0/0:23,0:23:66.19:0,66,918	0/0:20,0:20:54.15:0,54,745	1/1:2,10:13:33.11:579,33,0	1/1:1,14:16:36.12:638,36,0	1/1:9,11:20:48.11:773,48,0	1/1:0,20:20:57.20:1044,57,0	1/1:1,13:14:33.11:590,33,0	1/1:0,20:20:48.16:879,48,0	1/1:1,23:24:63.22:1153,63,0	1/1:3,17:21:54.12:857,54,0	1/1:1,30:31:75.26:1372,75,0	1/1:0,10:10:30.10:546,30,0
chr10	30031596	.	AG	A	12739.37	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-9.506;DP=580;FS=18.005;HRun=6;HaplotypeScore=68.2941;InbreedingCoeff=0.9988;MQ=78.90;MQ0=0;MQRankSum=-3.746;QD=28.69;ReadPosRankSum=2.360;VQSLOD=3.4448;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,30:32:81.20:871,81,0	1/1:0,8:8:21.05:226,21,0	0/0:17,0:17:39.07:0,39,449	0/0:22,0:22:56.43:0,56,635	1/1:0,20:20:60.15:645,60,0	1/1:1,16:17:45.11:483,45,0	1/1:0,17:17:42.11:451,42,0	1/1:3,18:21:51.09:532,51,0	0/0:19,0:19:57.19:0,57,750	1/1:1,19:19:54.14:580,54,0	1/1:1,19:20:54.14:580,54,0	1/1:4,31:35:93.23:999,93,0	1/1:0,27:27:72.18:774,72,0	1/1:3,20:23:57.14:612,57,0	0/0:28,0:28:80.21:0,80,514	1/1:0,21:21:51.13:548,51,0	0/0:30,0:30:74.83:0,75,485	0/0:18,0:17:50.24:0,50,322	1/1:2,14:16:42.10:451,42,0	1/1:0,13:13:39.10:419,39,0	1/1:1,23:24:66.17:709,66,0	1/1:1,19:20:54.14:579,54,0	1/1:1,9:10:27.07:290,27,0	1/1:1,19:20:54.14:580,54,0	1/1:2,15:17:45.11:484,45,0	1/1:0,21:21:63.14:668,63,0	1/1:2,30:32:87.22:935,87,0	1/1:0,10:10:30.08:322,30,0
chr10	30031929	.	G	GT	16881.07	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-3.216;DP=610;FS=11.475;HRun=8;HaplotypeScore=101.9342;InbreedingCoeff=0.9744;MQ=84.24;MQ0=0;MQRankSum=-8.502;QD=29.56;ReadPosRankSum=5.498;VQSLOD=3.4616;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,26:30:78.23:893,78,0	1/1:0,4:4:12.04:138,12,0	0/0:21,0:23:52.82:0,53,462	0/0:16,0:16:38.92:0,39,336	1/1:3,20:23:63.15:713,63,0	1/1:4,25:29:72.21:831,72,0	1/1:2,14:16:39.12:450,39,0	1/1:6,34:40:99:1155,102,0	1/1:3,14:17:42.12:485,42,0	1/1:1,23:24:69.21:796,69,0	1/1:1,19:21:60.01:671,60,0	1/1:2,23:25:63.19:727,63,0	1/1:5,17:22:51.14:575,51,0	1/1:2,16:18:26.69:554,27,0	1/1:7,26:33:63.19:727,63,0	1/1:3,24:27:63.19:727,63,0	1/1:0,17:17:48.14:551,48,0	1/1:3,11:14:30.09:346,30,0	1/1:4,24:28:72.20:822,72,0	1/1:0,24:24:72.21:831,72,0	1/1:3,13:16:36.11:415,36,0	1/1:1,17:20:56.83:615,57,0	1/1:1,16:17:23.72:526,24,0	1/1:1,13:14:39.12:450,39,0	1/1:0,29:29:81.24:935,81,0	1/1:2,23:25:66.16:736,66,0	1/1:2,31:33:90.27:1038,90,0	1/1:0,5:5:15.04:173,15,0
chr10	30033121	.	C	CA	15376.72	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-2.029;DP=605;FS=10.008;HRun=7;HaplotypeScore=70.9683;InbreedingCoeff=0.9965;MQ=76.16;MQ0=0;MQRankSum=-2.757;QD=30.69;ReadPosRankSum=2.936;VQSLOD=4.8009;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,17:20:51.16:616,51,0	1/1:0,8:8:21.06:254,21,0	0/0:13,0:13:30.02:0,30,283	0/0:13,0:13:21.28:0,21,178	1/1:2,26:28:78.24:942,78,0	1/1:0,22:22:57.17:689,57,0	1/1:2,14:16:42.13:507,42,0	1/1:5,27:32:78.24:942,78,0	0/0:19,0:19:51.07:0,51,487	1/1:5,22:27:66.19:785,66,0	1/1:2,38:40:99:1361,114,0	1/1:1,17:18:45.14:544,45,0	1/1:2,17:19:48.15:580,48,0	1/1:6,20:26:51.16:616,51,0	0/0:29,0:29:78.11:0,78,748	1/1:1,25:26:66.20:797,66,0	0/0:18,0:18:51.08:0,51,492	0/0:11,0:11:33:0,33,309	1/1:1,17:18:51.14:600,51,0	1/1:3,22:25:66.20:797,66,0	1/1:0,9:9:18.06:217,18,0	1/1:3,24:27:69.17:817,69,0	1/1:1,17:18:48.15:580,48,0	1/1:0,15:15:39.12:471,39,0	1/1:2,29:31:78.24:942,78,0	1/1:3,26:29:78.24:942,78,0	1/1:3,33:36:84.12:1014,84,0	1/1:1,10:11:30.09:362,30,0
chr10	30036197	.	AT	A	15581.72	PASS	AB=1.000;AC=53;AF=0.946;AN=56;BaseQRankSum=-4.794;DP=688;FS=3.204;HRun=8;HaplotypeScore=69.5656;InbreedingCoeff=0.5451;MQ=69.94;MQ0=1;MQRankSum=-3.657;QD=22.98;ReadPosRankSum=4.316;VQSLOD=5.4749;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,29:32:66.09:634,66,0	1/1:0,19:19:53.94:497,54,0	0/0:9,0:8:3.70:0,4,96	0/1:10,0:8:10.12:10,0,18	1/1:2,26:28:68.59:647,69,0	1/1:4,26:30:75.12:722,75,0	1/1:0,20:20:48.08:462,48,0	1/1:7,27:34:81.01:744,81,0	1/1:2,23:25:63.10:606,63,0	1/1:3,35:38:99:995,105,0	1/1:3,24:27:66.04:626,66,0	1/1:3,22:25:57.09:549,57,0	1/1:2,29:31:78.12:751,78,0	1/1:2,16:18:45.07:434,45,0	1/1:3,22:25:51.08:490,51,0	1/1:5,25:30:69.10:665,69,0	1/1:0,26:26:63.10:606,63,0	1/1:1,14:15:39.01:366,39,0	1/1:2,13:15:39.01:358,39,0	1/1:2,28:30:84.01:786,84,0	1/1:2,17:19:39.06:376,39,0	1/1:5,19:24:47.91:439,48,0	1/1:2,23:25:66.04:625,66,0	1/1:1,11:12:27.04:260,27,0	1/1:2,34:36:87.14:838,87,0	1/1:2,36:38:99:1024,108,0	1/1:4,31:34:78.11:751,78,0	1/1:0,11:11:33.05:318,33,0
chr10	30037115	.	CA	C	1746.78	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.550;DP=736;FS=1.148;HRun=2;HaplotypeScore=68.4800;InbreedingCoeff=0.9943;MQ=77.63;MQ0=0;MQRankSum=-2.414;QD=34.25;ReadPosRankSum=2.283;VQSLOD=4.0278;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:66,0:66:99:0,196,2901	0/0:16,0:16:48.16:0,48,718	0/0:23,0:23:60.17:0,60,845	0/0:9,0:9:17.05:0,17,330	0/0:29,0:29:87.28:0,87,1282	0/0:15,0:15:45.15:0,45,674	0/0:40,0:40:99:0,117,1713	0/0:41,0:41:99:0,120,1658	0/0:17,0:17:51.17:0,51,762	0/0:25,0:25:72.24:0,72,1079	0/0:26,0:26:78.26:0,78,1161	0/0:31,0:31:90.28:0,90,1308	0/0:25,0:25:72.24:0,72,1060	0/0:21,0:21:63.20:0,63,924	0/0:28,0:28:84.28:0,84,1259	0/0:31,0:31:93.29:0,93,1355	1/1:2,26:28:78.25:1012,78,0	1/1:0,23:23:66.21:856,66,0	0/0:17,0:17:51.17:0,51,746	0/0:30,0:30:90.28:0,90,1326	0/0:25,0:25:75.24:0,75,1104	0/0:27,0:27:78.26:0,78,1168	0/0:25,0:25:75.24:0,75,1102	0/0:31,0:31:93.30:0,93,1372	0/0:17,0:17:51.13:0,51,739	0/0:39,0:39:99:0,117,1679	0/0:22,0:22:66.22:0,66,971	0/0:9,0:9:27.03:0,27,322
chr10	30037336	.	A	AG	24488.07	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-7.621;DP=643;FS=3.430;HRun=0;HaplotypeScore=60.1335;InbreedingCoeff=0.9839;MQ=84.05;MQ0=0;MQRankSum=-9.641;QD=40.28;ReadPosRankSum=3.957;VQSLOD=5.4994;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,27:27:57.19:901,57,0	1/1:0,14:14:36.10:575,36,0	0/0:24,0:24:66.20:0,66,896	0/0:11,0:11:33.10:0,33,428	1/1:0,31:31:81.14:1177,81,0	1/1:2,36:38:72.25:1151,72,0	1/1:0,21:21:48.16:767,48,0	1/1:3,29:32:81.23:1218,81,0	1/1:0,21:21:60.20:959,60,0	1/1:0,20:20:60.20:945,60,0	1/1:0,19:19:41.82:651,42,0	1/1:0,20:20:60.20:959,60,0	1/1:0,24:24:60.20:959,60,0	1/1:0,27:27:75.26:1199,75,0	1/1:0,31:31:87.30:1390,87,0	1/1:0,29:29:75.26:1199,75,0	1/1:0,26:26:75.26:1198,75,0	1/1:0,11:11:30.10:479,30,0	1/1:1,19:20:60.19:916,60,0	1/1:1,28:29:72.24:1131,72,0	1/1:0,19:19:39.13:623,39,0	1/1:1,27:28:63.21:970,63,0	1/1:1,21:22:54.18:851,54,0	1/1:0,18:18:54.18:863,54,0	1/1:2,21:23:60.12:928,60,0	1/1:1,25:26:75.03:1117,75,0	1/1:1,26:27:75.21:1170,75,0	1/1:0,5:5:12.04:192,12,0
chr10	30038095	.	CT	C	18168.26	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-1.375;DP=744;FS=5.791;HRun=7;HaplotypeScore=133.4430;InbreedingCoeff=0.9759;MQ=72.36;MQ0=2;MQRankSum=-6.163;QD=25.37;ReadPosRankSum=3.958;VQSLOD=3.4242;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,34:36:93.20:949,93,0	1/1:0,9:9:21.04:214,21,0	0/0:12,0:10:12.52:0,13,136	0/0:16,0:15:17.02:0,17,194	1/1:1,27:28:77.69:784,78,0	1/1:0,19:19:57.13:581,57,0	1/1:1,24:25:66.14:673,66,0	1/1:4,21:23:51.05:502,51,0	1/1:2,12:14:36.06:367,36,0	1/1:4,35:39:99:993,99,0	1/1:1,35:36:99:999,99,0	1/1:4,27:31:72.13:734,72,0	1/1:3,24:27:66.15:673,66,0	1/1:7,18:25:63.08:622,63,0	1/1:4,40:44:99:1010,99,0	1/1:4,45:49:99:1162,114,0	1/1:3,16:19:51.07:509,51,0	1/1:0,23:23:63.14:643,63,0	1/1:3,19:22:54.06:539,54,0	1/1:0,33:30:86.79:820,87,0	1/1:1,33:34:78.18:796,78,0	1/1:1,27:27:66.14:673,66,0	1/1:5,22:27:60.02:611,60,0	1/1:1,33:34:78.17:795,78,0	1/1:0,21:21:54.12:551,54,0	1/1:1,27:28:81.14:816,81,0	1/1:3,30:32:93.18:938,93,0	1/1:0,7:7:21.05:214,21,0
chr10	30038572	.	CCG	C	1774.19	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=2.844;DP=333;FS=24.130;HRun=0;HaplotypeScore=81.7215;InbreedingCoeff=0.7615;MQ=83.93;MQ0=0;MQRankSum=-3.036;QD=6.36;ReadPosRankSum=2.249;VQSLOD=1.4864;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:23:31.08:100,31,0	1/1:4,0:4:4.44:14,4,0	0/0:9,0:9:8.17:0,8,253	0/0:13,0:13:18.67:0,19,348	1/1:6,0:6:14.80:67,15,0	1/1:12,0:12:17.76:57,18,0	1/1:18,1:19:36.31:154,36,0	1/1:25,0:25:60.10:392,60,0	1/1:11,0:11:17.76:58,18,0	1/1:4,1:5:11.89:75,12,0	1/1:2,0:2:4.44:14,4,0	1/1:18,0:18:36.14:122,36,0	1/1:15,0:15:22.09:69,22,0	1/1:7,0:7:4.44:15,4,0	1/1:18,1:19:27.43:124,27,0	1/1:10,0:10:15.14:49,15,0	0/0:15,0:15:3.69:0,4,197	0/0:17,0:17:19.05:0,19,264	1/1:12,0:12:19.47:61,19,0	1/1:6,0:6:14.80:67,15,0	1/1:23,1:24:31.87:140,32,0	1/1:5,0:5:7.81:24,8,0	1/1:7,0:7:11.10:36,11,0	1/1:12,0:12:19.98:65,20,0	1/1:9,1:10:11.89:75,12,0	1/1:8,0:8:13.32:44,13,0	1/1:10,0:10:14.47:45,14,0	1/1:9,0:9:19.98:63,20,0
chr10	30038573	.	CG	C	8280.07	PASS	AB=0.941;AC=50;AF=0.893;AN=56;BaseQRankSum=-4.902;DP=326;FS=24.169;HRun=1;HaplotypeScore=52.3178;InbreedingCoeff=0.5081;MQ=83.26;MQ0=0;MQRankSum=-3.667;QD=27.15;ReadPosRankSum=1.718;VQSLOD=3.2832;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,22:22:42.14:585,42,0	1/1:0,4:4:6.02:84,6,0	0/0:8,0:8:10.29:0,10,208	0/0:12,0:13:20.19:0,20,283	1/1:0,6:6:17.96:206,18,0	1/1:0,12:12:24.08:334,24,0	1/1:1,18:19:48.09:646,48,0	1/1:0,25:25:68.94:692,69,0	1/1:0,11:11:24.08:335,24,0	1/1:1,4:5:14.98:186,15,0	1/1:0,2:2:6.02:83,6,0	1/1:0,17:17:48.16:669,48,0	1/1:0,14:14:33.11:448,33,0	1/1:0,7:7:6.02:84,6,0	1/1:1,18:19:36.03:477,36,0	1/1:0,9:9:21.07:291,21,0	0/1:14,1:15:41.75:86,0,42	0/1:16,1:17:29.55:30,0,51	1/1:0,10:10:30.06:391,30,0	1/1:0,6:6:17.96:205,18,0	1/1:1,23:24:42.07:562,42,0	1/1:0,5:5:12.04:163,12,0	1/1:0,7:7:15.05:209,15,0	1/1:0,12:12:27.09:376,27,0	1/1:1,9:10:14.98:186,15,0	1/1:0,8:8:24.03:296,24,0	1/1:1,9:10:21.07:285,21,0	1/1:0,9:9:27.09:374,27,0
chr10	30039140	.	T	TA	17463.38	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=4.727;DP=560;FS=15.355;HRun=5;HaplotypeScore=125.3294;InbreedingCoeff=0.9462;MQ=80.16;MQ0=0;MQRankSum=-9.387;QD=33.84;ReadPosRankSum=5.157;VQSLOD=2.9453;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,30:31:87.02:1099,87,0	1/1:0,8:8:24.08:312,24,0	0/0:25,0:25:60.12:0,60,625	0/0:19,0:18:35.65:0,36,374	1/1:0,31:31:90.12:1100,90,0	1/1:1,29:30:81.26:1054,81,0	1/1:3,16:19:39.13:508,39,0	1/1:2,22:24:66.17:813,66,0	1/1:2,14:16:36.12:469,36,0	1/1:2,21:23:63.16:771,63,0	1/1:1,16:17:48.11:604,48,0	1/1:2,16:18:36.12:469,36,0	1/1:1,15:18:45.15:583,45,0	1/1:0,16:16:45.15:587,45,0	1/1:3,24:27:63.20:822,63,0	1/1:0,11:11:33.11:430,33,0	1/1:1,22:23:63.20:820,63,0	1/1:0,17:17:45.15:586,45,0	1/1:4,21:25:63.20:811,63,0	1/1:0,8:8:24.08:312,24,0	1/1:1,16:17:48.16:625,48,0	1/1:1,23:24:63.20:820,63,0	1/1:0,18:18:51.10:635,51,0	1/1:2,14:16:36.12:469,36,0	1/1:1,21:22:57.12:721,57,0	1/1:2,21:23:63.20:819,63,0	1/1:4,27:31:90.27:1146,90,0	1/1:0,3:3:6.02:78,6,0
chr10	30039683	.	GT	G	13035.24	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-2.276;DP=565;FS=0.000;HRun=8;HaplotypeScore=95.3727;InbreedingCoeff=0.9644;MQ=70.25;MQ0=1;MQRankSum=-4.067;QD=24.59;ReadPosRankSum=4.527;VQSLOD=4.9339;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,26:28:71.86:694,72,0	1/1:0,10:10:21.03:205,21,0	0/0:17,0:15:10.96:0,11,296	0/0:18,0:13:20.27:0,20,211	1/1:5,28:33:84.12:808,84,0	1/1:1,14:15:42.07:411,42,0	1/1:3,18:21:51:492,51,0	1/1:4,32:36:87.01:805,87,0	1/1:1,17:18:22.49:411,22,0	1/1:0,31:31:93.13:888,93,0	1/1:2,17:19:45.06:434,45,0	1/1:1,17:18:51.08:493,51,0	1/1:2,30:32:93.15:897,93,0	1/1:3,13:16:39.06:376,39,0	1/1:1,22:23:60.09:579,60,0	1/1:1,16:17:48.08:463,48,0	1/1:0,16:16:45.07:435,45,0	1/1:3,11:14:36.01:337,36,0	1/1:6,15:21:44.96:427,45,0	1/1:1,18:19:45.08:444,45,0	1/1:3,11:14:30.05:289,30,0	1/1:2,16:18:45.06:434,45,0	1/1:4,19:23:51.04:486,51,0	1/1:0,9:9:27.05:264,27,0	1/1:1,19:20:54.09:529,54,0	1/1:3,27:30:75.08:713,75,0	1/1:4,20:24:60.04:574,60,0	1/1:0,5:5:15.02:145,15,0
chr10	30039739	.	TTTTG	T	5737.39	PASS	AB=0.967;AC=30;AF=0.536;AN=56;BaseQRankSum=-2.111;DP=621;FS=17.652;HRun=0;HaplotypeScore=204.5469;InbreedingCoeff=-0.7420;MQ=47.57;MQ0=19;MQRankSum=6.605;QD=9.24;ReadPosRankSum=5.794;VQSLOD=2.5925;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:24:14.30:265,0,14	0/1:10,1:9:0.57:158,0,1	0/1:28,0:6:4.84:5,0,30	0/1:42,0:12:8.33:8,0,101	0/1:32,1:33:80.85:367,0,81	0/1:15,0:15:0.41:163,0,0	0/1:19,3:22:51.71:189,0,52	0/1:21,3:23:60.04:371,0,60	1/1:12,1:13:6.01:249,6,0	0/1:35,2:36:99:427,0,255	0/1:22,0:21:44.08:174,0,44	0/1:21,2:22:99:162,0,169	0/1:21,2:23:99:310,0,106	0/1:25,0:25:99:216,0,108	0/1:19,1:20:56.92:216,0,57	0/1:20,0:19:96.79:97,0,122	0/1:20,0:20:1.07:213,0,1	0/1:16,0:16:41.96:68,0,42	0/1:24,0:23:21.46:278,0,21	0/1:23,0:22:99:203,0,173	0/1:9,0:9:38.95:39,0,66	0/1:22,3:25:43.79:344,0,44	1/1:15,3:18:2.21:225,2,0	0/1:17,0:14:88.21:100,0,88	0/1:19,1:19:10.11:263,0,10	0/1:21,1:22:25.15:288,0,25	0/1:33,2:34:57.64:342,0,58	0/1:10,0:9:1.11:1,0,120
chr10	30039740	.	TTTG	T	4920.77	PASS	AB=0.991;AC=31;AF=0.554;AN=56;BaseQRankSum=-3.679;DP=621;FS=0.000;HRun=0;HaplotypeScore=195.7814;InbreedingCoeff=-0.7536;MQ=47.11;MQ0=22;MQRankSum=7.809;QD=7.92;ReadPosRankSum=1.764;VQSLOD=4.0232;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:23,1:24:39.67:213,0,40	1/1:11,0:9:4.74:140,5,0	0/1:32,0:6:4.77:5,0,31	0/1:44,0:12:7.97:8,0,83	0/1:32,1:33:55.43:314,0,55	1/1:13,0:13:4.26:157,4,0	0/1:20,0:20:65.07:133,0,65	0/1:22,1:22:45.69:345,0,46	0/1:13,0:13:0.81:210,0,1	0/1:36,0:35:99:347,0,244	0/1:21,1:21:34.94:188,0,35	0/1:23,0:22:99:149,0,112	0/1:23,0:23:44.55:264,0,45	0/1:24,1:25:92.19:206,0,92	0/1:20,0:20:60.53:209,0,61	0/1:20,0:19:69.40:69,0,113	1/1:20,0:20:5.94:213,6,0	0/1:16,0:16:20.52:94,0,21	0/1:24,0:23:28.41:182,0,28	0/1:23,0:22:99:157,0,128	0/1:9,0:9:31.07:31,0,65	0/1:25,0:25:36.29:260,0,36	0/1:18,0:18:16.17:159,0,16	0/1:17,0:14:43.98:87,0,44	0/1:21,0:20:25.28:184,0,25	0/1:21,0:21:35.81:287,0,36	0/1:34,1:34:60.12:305,0,60	0/1:10,0:9:1.46:1,0,110
chr10	30039742	.	TG	T	6450.87	PASS	AB=0.959;AC=43;AF=0.768;AN=56;BaseQRankSum=-1.184;DP=629;FS=23.709;HRun=1;HaplotypeScore=175.6161;InbreedingCoeff=-0.2789;MQ=46.50;MQ0=25;MQRankSum=6.220;QD=10.26;ReadPosRankSum=9.320;VQSLOD=0.4519;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:25:27.18:334,27,0	1/1:11,0:9:5.76:134,6,0	0/1:29,5:6:4.82:5,0,26	0/1:41,3:12:15.72:16,0,54	0/1:32,1:33:19.23:333,0,19	1/1:13,0:13:22.58:204,23,0	0/1:21,0:21:30.15:130,0,30	0/1:23,0:22:27.96:317,0,28	1/1:13,0:13:7.10:187,7,0	0/1:37,0:36:99:385,0,160	1/1:23,1:22:7.03:288,7,0	0/1:23,1:23:52.10:191,0,52	1/1:23,0:23:22.15:314,22,0	0/1:22,1:23:16.63:240,0,17	1/1:18,2:20:27.64:326,28,0	0/1:21,0:20:6.25:179,0,6	1/1:15,6:21:13.01:355,13,0	0/1:13,4:17:5.71:189,0,6	1/1:22,0:21:16.45:281,16,0	0/1:22,1:22:27.98:260,0,28	0/1:9,0:9:51.65:52,0,53	1/1:25,0:25:39.63:389,40,0	1/1:18,1:19:7.01:181,7,0	1/1:17,0:14:27.56:173,28,0	1/1:20,1:20:3.37:239,3,0	1/1:21,0:21:3.25:297,3,0	1/1:34,1:34:26.99:442,27,0	0/1:10,0:9:10.99:11,0,86
chr10	30039763	.	T	TTTTG	12571.94	PASS	AB=0.987;AC=45;AF=0.804;AN=56;BaseQRankSum=-1.609;DP=620;FS=27.994;HRun=0;HaplotypeScore=188.5058;InbreedingCoeff=0.0466;MQ=49.79;MQ0=25;MQRankSum=-2.607;QD=23.77;ReadPosRankSum=6.175;VQSLOD=3.0794;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:23:19.50:598,20,0	1/1:11,0:9:24.03:359,24,0	0/0:43,0:8:5.47:0,5,79	0/0:48,0:14:3.15:0,3,41	1/1:32,0:32:36.25:912,36,0	1/1:14,0:14:13.79:409,14,0	1/1:18,1:19:13.28:281,13,0	0/1:20,0:20:15.07:323,0,15	1/1:13,0:13:38.02:444,38,0	0/1:34,0:33:19.07:815,0,19	1/1:22,0:20:56.81:705,57,0	0/1:22,0:22:76.67:297,0,77	0/1:21,1:22:35.12:359,0,35	0/1:20,0:20:27.86:407,0,28	1/1:15,1:16:4.70:337,5,0	1/1:21,0:20:0.33:485,0,0	1/1:20,0:20:42.18:475,42,0	1/1:17,1:18:24.65:457,25,0	1/1:24,1:24:7.50:556,8,0	0/1:18,0:18:43.58:383,0,44	1/1:7,0:7:13.18:124,13,0	1/1:22,0:22:29.13:623,29,0	1/1:26,0:26:66.49:845,66,0	0/1:15,0:13:15.88:118,0,16	1/1:19,0:18:43.84:577,44,0	1/1:20,1:20:18.72:604,19,0	1/1:34,1:34:57.13:869,57,0	1/1:13,0:12:3.01:208,3,0
chr10	30040434	.	C	CTT	36469.57	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-4.847;DP=718;FS=1.642;HRun=0;HaplotypeScore=91.6399;InbreedingCoeff=0.9994;MQ=79.01;MQ0=0;MQRankSum=-8.626;QD=53.09;ReadPosRankSum=5.063;VQSLOD=5.6731;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,39:43:99:2011,99,0	1/1:0,12:13:36.12:731,36,0	0/0:16,0:16:44.81:0,45,623	0/0:15,0:15:28.26:0,28,389	1/1:2,23:26:66.19:1274,66,0	1/1:0,17:17:48.16:975,48,0	1/1:1,27:27:66.23:1337,66,0	1/1:2,23:27:72.20:1312,72,0	1/1:0,32:32:84.29:1707,84,0	1/1:0,26:28:84.24:1602,84,0	1/1:1,27:28:81.17:1561,81,0	1/1:1,32:33:90.31:1828,90,0	1/1:1,22:24:57.20:1159,57,0	1/1:1,38:39:99:2155,108,0	1/1:0,37:38:90.14:1829,90,0	1/1:1,31:33:75.26:1524,75,0	1/1:0,21:22:51.18:1036,51,0	1/1:0,23:23:69.24:1402,69,0	1/1:0,24:24:72.25:1425,72,0	1/1:0,24:25:72.04:1293,72,0	1/1:0,27:26:78.27:1585,78,0	1/1:3,18:21:54.18:1070,54,0	1/1:0,16:16:48.16:975,48,0	1/1:0,26:27:72.25:1462,72,0	1/1:0,16:16:48.16:975,48,0	1/1:0,26:26:78.26:1538,78,0	1/1:2,34:36:99:1971,99,0	1/1:0,15:15:36.12:731,36,0
chr10	30041352	.	CA	C	19248.19	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=0.040;DP=568;FS=15.251;HRun=2;HaplotypeScore=120.6331;InbreedingCoeff=0.9800;MQ=72.28;MQ0=0;MQRankSum=-4.917;QD=35.32;ReadPosRankSum=3.664;VQSLOD=3.0918;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,39:39:99:1362,105,0	1/1:4,7:11:27.07:333,27,0	0/0:14,0:13:15.16:0,15,289	0/0:9,0:8:20.62:0,21,222	1/1:0,17:18:45.15:583,45,0	1/1:0,12:12:33.11:428,33,0	1/1:0,20:21:63.20:817,63,0	1/1:0,21:21:57.14:696,57,0	1/1:4,14:18:48.11:591,48,0	1/1:0,25:25:75.20:955,75,0	1/1:1,9:10:27.09:350,27,0	1/1:0,34:34:93.30:1200,93,0	1/1:0,18:18:54.17:695,54,0	1/1:0,29:29:81.26:1044,81,0	1/1:1,15:16:45.15:582,45,0	1/1:0,15:15:45.15:584,45,0	1/1:9,26:35:99:1188,99,0	1/1:0,25:25:69.17:875,69,0	1/1:0,16:16:45.09:547,45,0	1/1:0,11:11:30.10:388,30,0	1/1:1,33:34:90.29:1165,90,0	1/1:0,24:24:66.21:855,66,0	1/1:0,17:17:51.17:661,51,0	1/1:1,25:26:69.22:895,69,0	1/1:0,19:19:45.15:580,45,0	1/1:0,23:24:72.17:900,72,0	1/1:0,21:22:60.20:778,60,0	1/1:0,5:5:15.05:195,15,0
chr10	30041744	.	AT	A	882.15	PASS	AC=26;AF=0.867;AN=30;BaseQRankSum=1.784;DP=93;FS=0.000;HRun=1;HaplotypeScore=57.4088;InbreedingCoeff=0.3494;MQ=59.32;MQ0=2;MQRankSum=-3.258;QD=16.64;ReadPosRankSum=-0.690;VQSLOD=3.3433;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,3:4:1.55:4,2,0	1/1:1,0:1:2.98:21,3,0	0/0:5,0:1:3.01:0,3,38	0/0:11,0:6:9.03:0,9,131	1/1:3,2:5:5.93:40,6,0	./.	./.	1/1:7,6:13:39.12:484,39,0	1/1:1,0:1:2.99:24,3,0	./.	./.	./.	./.	1/1:4,0:4:2.99:24,3,0	./.	1/1:5,0:5:4.56:42,5,0	1/1:2,3:5:10.54:104,11,0	1/1:0,1:1:3.01:39,3,0	./.	1/1:1,1:2:1.55:4,2,0	./.	./.	./.	./.	./.	1/1:0,3:3:3.01:40,3,0	1/1:4,3:7:13.55:116,14,0	1/1:1,1:1:3.01:40,3,0
chr10	30041746	.	AT	A	312.52	PASS	AB=0.900;AC=11;AF=0.220;AN=50;BaseQRankSum=-0.145;DP=92;FS=24.589;HRun=1;HaplotypeScore=59.2706;InbreedingCoeff=0.2551;MQ=59.64;MQ0=1;MQRankSum=-1.291;QD=10.08;ReadPosRankSum=4.525;VQSLOD=-0.2418;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:4:3.60:0,4,36	0/1:1,0:1:0:0,0,0	0/0:5,0:1:3.01:0,3,38	0/0:11,0:6:9.03:0,9,128	0/0:2,3:5:5.11:0,5,26	0/0:1,0:1:2.98:0,3,21	0/0:1,0:1:2.97:0,3,20	1/1:11,2:13:38.35:266,38,0	0/0:1,0:1:0.47:0,0,1	0/0:3,0:3:8.73:0,9,49	0/0:4,0:4:8.93:0,9,64	./.	0/0:1,0:1:2.97:0,3,20	0/0:1,3:4:1.94:0,2,36	0/0:2,0:2:5.93:0,6,40	0/0:2,3:5:1.38:0,1,67	1/1:4,1:5:3.63:37,4,0	1/1:1,0:1:2.99:23,3,0	./.	0/0:2,0:2:5.93:0,6,40	0/0:2,0:2:2.97:0,3,20	0/0:1,0:1:2.98:0,3,22	0/0:5,1:6:17.87:0,18,128	./.	0/0:2,0:2:5.93:0,6,40	0/1:3,0:3:13.69:14,0,24	0/1:4,3:7:22.71:78,0,23	1/1:1,0:1:2.97:20,3,0
chr10	30041747	.	T	TA	400.11	PASS	AB=0.897;AC=12;AF=0.240;AN=50;BaseQRankSum=-0.610;DP=88;FS=25.870;HRun=1;HaplotypeScore=58.4452;InbreedingCoeff=0.2214;MQ=60.67;MQ0=1;MQRankSum=-1.919;QD=11.11;ReadPosRankSum=5.846;VQSLOD=-0.0731;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:3,1:4:5.93:0,6,40	0/1:1,0:1:0:0,0,0	0/0:4,0:1:3.01:0,3,38	0/0:8,0:5:9.03:0,9,107	0/0:5,0:5:5.11:0,5,26	0/0:1,0:1:2.98:0,3,21	0/0:1,0:1:2.97:0,3,20	1/1:8,5:13:38.98:364,39,0	0/0:0,1:1:0.47:0,0,1	0/0:3,0:3:8.73:0,9,49	0/0:4,0:4:8.93:0,9,64	./.	0/0:1,0:1:2.97:0,3,20	0/0:3,1:4:4.37:0,4,39	0/0:2,0:2:5.93:0,6,40	0/1:3,2:5:17.29:17,0,66	1/1:4,1:5:2.01:30,2,0	1/1:1,0:1:2.98:22,3,0	./.	0/0:1,1:2:5.93:0,6,40	0/0:2,0:2:2.97:0,3,20	0/0:1,0:1:2.98:0,3,22	0/0:6,0:6:17.87:0,18,128	./.	0/0:2,0:2:5.93:0,6,40	0/1:3,0:3:13.69:14,0,24	0/1:6,1:7:24.66:62,0,25	1/1:1,0:1:2.98:21,3,0
chr10	30041750	.	C	CTG	2840.12	PASS	AB=1.000;AC=49;AF=0.942;AN=52;BaseQRankSum=2.251;DP=128;FS=9.978;HRun=0;HaplotypeScore=75.4564;InbreedingCoeff=0.0660;MQ=52.87;MQ0=0;MQRankSum=-2.941;QD=23.09;ReadPosRankSum=-1.465;VQSLOD=3.2512;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:4:6.02:72,6,0	1/1:2,0:2:6.02:71,6,0	0/0:3,0:1:3.01:0,3,44	0/1:6,0:5:23.67:24,0,76	1/1:8,3:11:9.03:101,9,0	1/1:3,0:3:3.01:35,3,0	1/1:1,0:1:3.01:36,3,0	1/1:15,7:22:60.03:752,60,0	1/1:1,1:2:3.01:35,3,0	1/1:4,0:4:9.03:118,9,0	1/1:4,0:4:9.03:103,9,0	./.	1/1:2,0:2:3.01:36,3,0	1/1:0,4:4:9.03:102,9,0	1/1:3,0:3:9.03:107,9,0	1/1:2,5:7:21.01:245,21,0	1/1:3,2:5:9.02:100,9,0	1/1:1,0:1:3.01:39,3,0	1/1:4,0:4:12.03:149,12,0	1/1:7,1:8:6.02:72,6,0	1/1:2,0:2:3.01:36,3,0	1/1:2,0:2:3.01:34,3,0	1/1:5,1:6:18.05:207,18,0	./.	1/1:3,0:3:6.02:72,6,0	1/1:3,0:3:9.03:117,9,0	1/1:7,4:11:21:244,21,0	1/1:1,0:1:3.01:36,3,0
chr10	30041775	.	AATTATGGTTAAC	A	15097.44	PASS	AC=46;AF=0.920;AN=50;BaseQRankSum=0.792;DP=197;FS=4.120;HRun=0;HaplotypeScore=93.4214;InbreedingCoeff=0.6333;MQ=59.04;MQ0=0;MQRankSum=-4.465;QD=81.61;ReadPosRankSum=2.137;VQSLOD=4.4998;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,8:9:24.03:825,24,0	1/1:0,3:3:9.03:345,9,0	0/0:5,0:5:15.05:0,15,793	0/0:2,0:2:6.02:0,6,252	1/1:2,14:16:39.02:1094,39,0	1/1:0,8:8:15.05:462,15,0	1/1:0,5:5:12.04:461,12,0	1/1:5,22:27:63.20:1969,63,0	1/1:1,3:4:6.02:230,6,0	1/1:0,8:8:21.03:645,21,0	1/1:0,4:4:12.04:461,12,0	1/1:0,4:4:6.02:230,6,0	1/1:0,3:3:9.03:345,9,0	1/1:0,9:9:12.04:461,12,0	1/1:0,7:7:15.05:576,15,0	1/1:0,11:11:30.10:1151,30,0	1/1:2,7:9:18.06:691,18,0	./.	1/1:3,3:6:9.02:255,9,0	1/1:0,11:11:33.11:1266,33,0	./.	1/1:0,4:4:9.03:345,9,0	1/1:0,8:8:21.07:805,21,0	./.	1/1:1,6:7:15.05:548,15,0	1/1:0,6:6:18.06:549,18,0	1/1:0,15:15:33.11:1265,33,0	1/1:0,1:1:3.01:115,3,0
chr10	30042015	.	A	AT	20314.78	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-8.112;DP=641;FS=24.688;HRun=4;HaplotypeScore=63.0021;InbreedingCoeff=0.9868;MQ=82.13;MQ0=1;MQRankSum=-8.811;QD=33.80;ReadPosRankSum=6.289;VQSLOD=2.7786;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,35:38:90.30:1229,90,0	1/1:0,6:6:18.06:246,18,0	0/0:18,0:18:38.10:0,38,380	0/0:22,0:22:54.10:0,54,567	1/1:3,18:20:42.10:545,42,0	1/1:2,25:27:63.21:862,63,0	1/1:3,23:26:63.21:861,63,0	1/1:0,26:26:75.21:978,75,0	1/1:2,31:33:84.28:1149,84,0	1/1:3,29:32:90.29:1207,90,0	1/1:0,13:13:30.10:410,30,0	1/1:2,34:36:90.30:1220,90,0	1/1:2,21:23:50.81:680,51,0	1/1:0,17:17:42.14:574,42,0	1/1:2,25:27:69.09:896,69,0	1/1:3,24:27:66.22:902,66,0	1/1:3,19:22:51.17:696,51,0	1/1:1,31:32:84.28:1149,84,0	1/1:0,14:14:42.13:559,42,0	1/1:0,13:13:30.01:368,30,0	1/1:3,31:34:84.28:1148,84,0	1/1:0,14:14:39.13:533,39,0	1/1:1,10:11:30.06:389,30,0	1/1:0,22:22:63.21:862,63,0	1/1:3,14:17:33.11:451,33,0	1/1:2,33:35:99:1335,99,0	1/1:3,26:29:63.21:861,63,0	1/1:0,6:5:15.05:205,15,0
chr10	30042369	.	T	TC	8516.14	PASS	AB=0.941;AC=53;AF=0.946;AN=56;BaseQRankSum=-1.887;DP=536;FS=0.960;HRun=1;HaplotypeScore=84.3840;InbreedingCoeff=0.5475;MQ=70.00;MQ0=2;MQRankSum=-2.201;QD=16.31;ReadPosRankSum=4.601;VQSLOD=5.1824;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:31,0:29:48:464,48,0	1/1:3,1:4:9.02:94,9,0	0/1:15,0:13:8.13:8,0,116	0/0:14,0:11:9.52:0,10,146	1/1:31,0:30:62.37:506,62,0	1/1:17,0:17:38.75:374,39,0	1/1:17,1:18:11.79:281,12,0	1/1:32,0:27:77.97:739,78,0	1/1:13,0:13:23.99:229,24,0	1/1:25,0:25:49.30:583,49,0	1/1:12,1:13:32.49:299,32,0	1/1:16,0:15:7.35:78,7,0	1/1:19,0:18:23.86:226,24,0	1/1:20,0:20:14.83:124,15,0	1/1:26,0:26:38.52:386,39,0	1/1:16,1:17:32.85:311,33,0	1/1:23,0:23:32.66:310,33,0	1/1:21,0:21:32.82:341,33,0	1/1:23,0:23:59.71:498,60,0	1/1:18,0:18:41.64:368,42,0	1/1:12,0:12:13.01:152,13,0	1/1:19,0:19:44.73:394,45,0	1/1:21,1:21:32.79:322,33,0	1/1:17,0:17:18.51:178,19,0	1/1:18,0:18:24.04:238,24,0	1/1:27,0:27:77.62:692,78,0	1/1:16,0:16:26.74:230,27,0	1/1:8,0:7:9.02:92,9,0
chr10	30042370	.	C	CCTT	18939.36	PASS	AB=1.000;AC=54;AF=0.964;AN=56;BaseQRankSum=-3.505;DP=635;FS=5.736;HRun=0;HaplotypeScore=104.4340;InbreedingCoeff=0.4331;MQ=62.68;MQ0=3;MQRankSum=-4.423;QD=29.83;ReadPosRankSum=2.372;VQSLOD=5.1517;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,24:32:51.10:1033,51,0	1/1:1,3:4:9.03:205,9,0	0/1:14,0:11:4.57:5,0,124	0/1:12,0:10:1.71:2,0,188	1/1:3,25:32:68.73:1061,69,0	1/1:1,13:18:41.81:851,42,0	1/1:3,13:18:38.65:678,39,0	1/1:7,19:31:86.88:1263,87,0	1/1:2,13:17:29.99:608,30,0	1/1:4,22:28:51.14:1129,51,0	1/1:3,13:17:38.71:565,39,0	1/1:6,16:21:23.79:303,24,0	1/1:3,17:21:32.95:655,33,0	1/1:4,20:27:23.92:352,24,0	1/1:8,21:33:58.16:1051,58,0	1/1:8,12:23:47.97:810,48,0	1/1:1,24:27:32.47:729,32,0	1/1:5,19:27:45.59:876,46,0	1/1:8,18:26:71.11:934,71,0	1/1:3,15:22:43.99:734,44,0	1/1:1,0:12:18.89:318,19,0	1/1:1,19:20:44.76:688,45,0	1/1:6,18:27:44.34:746,44,0	1/1:3,16:20:23.97:462,24,0	1/1:1,19:20:24.08:544,24,0	1/1:9,27:36:92.97:1458,93,0	1/1:7,15:24:38.80:636,39,0	1/1:2,7:9:12.04:243,12,0
chr10	30044042	.	A	AACACACACACACACACAC	11853.57	PASS	AC=50;AF=0.962;AN=52;BaseQRankSum=-3.474;DP=569;FS=3.617;HRun=0;HaplotypeScore=255.0673;InbreedingCoeff=0.2193;MQ=60.90;MQ0=6;MQRankSum=1.369;QD=23.71;ReadPosRankSum=2.789;VQSLOD=3.6719;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:36,0:33:13.31:208,13,0	1/1:15,0:15:12.03:560,12,0	./.	0/0:30,0:19:2.95:0,3,19	1/1:23,0:22:4.47:227,4,0	1/1:16,0:15:12.04:571,12,0	1/1:27,0:25:20.99:617,21,0	1/1:26,0:25:21.34:573,21,0	1/1:16,0:15:12.04:277,12,0	1/1:17,0:17:21.02:534,21,0	1/1:6,0:5:3.01:69,3,0	1/1:18,0:17:20.06:490,20,0	1/1:16,0:16:21.07:832,21,0	./.	1/1:28,0:28:20.93:472,21,0	1/1:13,0:13:6:262,6,0	1/1:18,0:18:14.07:748,14,0	1/1:16,0:15:26.69:1257,27,0	1/1:24,0:23:22.45:451,22,0	1/1:20,0:18:2.94:211,3,0	1/1:31,0:31:2.98:24,3,0	1/1:18,0:17:9.03:209,9,0	1/1:21,0:19:4.80:99,5,0	1/1:18,0:28:2.91:161,3,0	1/1:12,1:19:3.01:252,3,0	1/1:19,0:17:24.08:1022,24,0	1/1:24,0:21:27.01:1292,27,0	1/1:3,0:3:9.03:434,9,0
chr10	30044058	.	C	CACACACACACACACACAC	15014.84	PASS	AB=1.000;AC=49;AF=0.942;AN=52;BaseQRankSum=-3.698;DP=606;FS=0.000;HRun=0;HaplotypeScore=274.5874;InbreedingCoeff=0.2288;MQ=41.97;MQ0=9;MQRankSum=2.159;QD=28.44;ReadPosRankSum=2.467;VQSLOD=2.9703;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:36,0:33:13.31:208,13,0	1/1:15,0:15:15.04:745,15,0	./.	0/0:37,0:17:2.63:0,3,19	1/1:18,0:17:4.47:227,4,0	1/1:18,0:17:18.06:821,18,0	1/1:29,0:27:27.01:845,27,0	1/1:23,0:22:21.34:573,21,0	1/1:15,0:14:12.04:277,12,0	1/1:23,0:23:38.11:1455,38,0	1/1:10,0:9:3.01:69,3,0	1/1:20,0:19:19.59:490,20,0	1/1:19,0:19:21.07:832,21,0	./.	1/1:25,0:25:20.93:472,21,0	1/1:9,7:17:6:263,6,0	1/1:18,0:18:17.08:843,17,0	1/1:23,0:22:27.05:1361,27,0	1/1:26,0:23:30.69:759,31,0	1/1:21,0:19:8.96:603,9,0	0/1:34,0:34:1.78:19,0,2	1/1:19,0:18:9.03:209,9,0	1/1:16,0:14:4.80:99,5,0	1/1:28,0:29:2.24:161,2,0	1/1:24,0:22:6.02:409,6,0	1/1:24,0:22:34.67:1549,35,0	1/1:22,0:19:27.01:1292,27,0	1/1:4,0:4:9.03:435,9,0
chr10	30044209	.	CAAGGTGCT	C	25828.63	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=6.059;DP=532;FS=24.094;HRun=0;HaplotypeScore=172.4640;InbreedingCoeff=0.9083;MQ=90.65;MQ0=0;MQRankSum=-11.390;QD=54.49;ReadPosRankSum=6.570;VQSLOD=3.0557;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,21:30:57.20:1529,57,0	1/1:5,5:10:15.05:407,15,0	0/0:29,0:29:72.22:0,72,2727	0/0:29,0:29:77.73:0,78,2744	1/1:3,13:16:36.12:965,36,0	1/1:5,7:11:18.06:488,18,0	1/1:7,23:30:63.22:1692,63,0	1/1:6,27:33:81.24:2027,81,0	1/1:1,12:13:24.08:635,24,0	1/1:0,11:11:33.10:822,33,0	1/1:6,15:21:45.15:1171,45,0	1/1:0,12:12:30.10:813,30,0	1/1:3,17:20:51.18:1375,51,0	1/1:4,14:18:35.92:968,36,0	1/1:3,18:21:42.14:1123,42,0	1/1:2,23:25:69.24:1870,69,0	1/1:10,14:24:30.10:813,30,0	1/1:9,16:25:39.13:1057,39,0	1/1:6,10:16:30.09:675,30,0	1/1:1,5:6:9.03:244,9,0	1/1:4,15:19:36.12:959,36,0	1/1:3,11:14:27.09:712,27,0	1/1:5,12:17:39.13:1047,39,0	1/1:3,15:18:27.53:720,28,0	1/1:3,20:23:60.21:1618,60,0	1/1:2,15:17:42.12:1080,42,0	1/1:4,17:19:32.95:857,33,0	1/1:0,2:2:6.02:163,6,0
chr10	30045340	.	GC	G	13372.44	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-0.425;DP=527;FS=0.816;HRun=6;HaplotypeScore=55.6339;InbreedingCoeff=0.9621;MQ=82.49;MQ0=0;MQRankSum=-7.171;QD=27.35;ReadPosRankSum=5.309;VQSLOD=4.8457;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,27:29:72.18:774,72,0	1/1:1,9:10:21.05:226,21,0	0/0:19,1:19:25.44:0,25,487	0/0:18,0:16:10.15:0,10,302	1/1:0,27:27:81.18:859,81,0	1/1:0,19:19:45.11:484,45,0	1/1:2,24:26:59.92:644,60,0	1/1:4,21:25:54.10:564,54,0	1/1:1,15:16:45.11:484,45,0	1/1:1,24:25:72.18:773,72,0	1/1:1,19:20:48.11:507,48,0	1/1:1,21:22:63.16:677,63,0	1/1:3,19:22:48.12:516,48,0	1/1:0,8:8:24.06:258,24,0	1/1:1,18:19:54.14:580,54,0	1/1:0,24:24:69.17:742,69,0	1/1:5,10:15:24.06:258,24,0	1/1:2,16:18:48.12:516,48,0	1/1:2,17:19:51.13:548,51,0	1/1:0,21:21:57.14:612,57,0	1/1:0,26:26:63.16:677,63,0	1/1:0,10:10:30.08:322,30,0	1/1:0,17:17:47.69:515,48,0	1/1:0,11:11:30.08:322,30,0	1/1:0,17:17:39.10:419,39,0	1/1:0,17:17:48.12:516,48,0	1/1:4,16:20:39.10:419,39,0	1/1:0,6:6:15.04:161,15,0
chr10	30046047	.	TATATGTAC	T	6457.84	PASS	AB=1.000;AC=51;AF=0.981;AN=52;BaseQRankSum=-1.295;DP=202;FS=0.000;HRun=0;HaplotypeScore=58.4630;InbreedingCoeff=-0.0709;MQ=55.30;MQ0=1;MQRankSum=-1.004;QD=33.81;ReadPosRankSum=-0.189;VQSLOD=3.9580;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:17:26.96:458,27,0	1/1:1,0:1:2.98:21,3,0	./.	./.	1/1:8,0:8:12.01:249,12,0	1/1:13,0:13:24.02:516,24,0	1/1:4,0:4:6.01:110,6,0	1/1:28,0:28:66.28:711,66,0	1/1:5,0:5:6.02:165,6,0	1/1:4,0:4:9.02:153,9,0	1/1:5,0:5:9.03:228,9,0	1/1:8,0:8:12.01:270,12,0	1/1:3,0:3:6.01:110,6,0	1/1:5,0:5:9:187,9,0	1/1:8,0:8:15.04:336,15,0	1/1:6,0:6:14.98:270,15,0	1/1:9,10:19:21.03:514,21,0	1/1:6,0:6:8.92:100,9,0	1/1:5,0:5:11.53:288,12,0	0/1:7,0:7:15.46:176,0,15	1/1:1,0:1:2.98:21,3,0	1/1:2,0:2:5.99:104,6,0	1/1:4,0:4:5.95:42,6,0	1/1:2,0:2:2.98:22,3,0	1/1:9,0:9:15.02:353,15,0	1/1:9,0:9:23.90:414,24,0	1/1:6,0:6:15.02:332,15,0	1/1:6,0:6:12.04:311,12,0
chr10	30046048	.	ATATG	A	2021.35	PASS	AB=0.958;AC=43;AF=0.796;AN=54;BaseQRankSum=3.844;DP=196;FS=0.000;HRun=0;HaplotypeScore=61.4432;InbreedingCoeff=0.2353;MQ=52.31;MQ0=1;MQRankSum=-4.449;QD=10.87;ReadPosRankSum=4.298;VQSLOD=2.2958;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:15,1:16:14.27:120,14,0	0/0:1,0:1:0.47:0,0,1	./.	0/1:8,0:3:0:0,0,0	0/1:6,1:7:13.15:89,0,13	1/1:11,1:12:17.66:185,18,0	1/1:4,0:4:5.60:37,6,0	1/1:27,0:27:1.46:153,1,0	1/1:5,0:5:6:52,6,0	1/1:5,0:5:7.80:54,8,0	1/1:5,0:5:9:81,9,0	1/1:8,0:8:8.83:80,9,0	1/1:3,0:3:5.50:36,5,0	1/1:5,0:5:5.83:53,6,0	1/1:7,1:8:14.51:135,15,0	1/1:5,1:6:8.65:100,9,0	1/1:18,1:19:17.99:156,18,0	1/1:5,1:6:2.05:48,2,0	0/1:5,0:5:0.92:84,0,1	1/1:6,0:6:8.81:99,9,0	0/0:1,0:1:0.47:0,0,1	1/1:2,0:2:2.82:26,3,0	0/0:4,0:4:0.94:0,1,1	0/0:1,1:2:0.20:0,0,0	1/1:8,0:8:11.82:107,12,0	1/1:9,0:9:14.54:156,15,0	1/1:5,1:6:11.83:130,12,0	1/1:3,3:6:12.02:130,12,0
chr10	30046050	.	ATG	A	4442.58	PASS	AB=1.000;AC=53;AF=0.981;AN=54;DP=193;FS=0.000;HRun=0;HaplotypeScore=49.8844;InbreedingCoeff=0.1045;MQ=52.77;MQ0=1;QD=23.14;VQSLOD=4.6568;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,14:16:27.09:377,27,0	1/1:0,1:1:3.01:46,3,0	./.	0/1:8,0:3:0:0,0,0	1/1:2,5:7:11.93:133,12,0	1/1:1,11:12:24:280,24,0	1/1:0,4:4:6.02:81,6,0	1/1:2,27:29:74.75:886,75,0	1/1:0,4:4:6.02:89,6,0	1/1:3,2:5:9.01:109,9,0	1/1:0,5:5:9.02:103,9,0	1/1:0,8:8:12.04:154,12,0	1/1:0,4:4:6.02:81,6,0	1/1:0,4:4:9.03:116,9,0	1/1:1,7:8:14.96:169,15,0	1/1:1,5:6:14.94:181,15,0	1/1:12,6:18:17.92:203,18,0	1/1:2,4:6:8.92:100,9,0	1/1:2,3:5:14.97:155,15,0	1/1:2,4:6:11.77:135,12,0	1/1:0,1:1:3.01:46,3,0	1/1:0,3:3:6.02:80,6,0	1/1:0,4:4:6.02:91,6,0	1/1:1,1:2:3.01:46,3,0	1/1:0,7:7:15.05:189,15,0	1/1:0,8:8:24.05:308,24,0	1/1:1,4:5:14.96:170,15,0	1/1:3,3:6:11.94:114,12,0
chr10	30046055	.	CATATAT	C	4092.28	PASS	AB=0.714;AC=43;AF=0.977;AN=44;BaseQRankSum=1.806;DP=195;FS=3.061;HRun=0;HaplotypeScore=63.8164;InbreedingCoeff=-0.0884;MQ=52.65;MQ0=2;MQRankSum=-1.694;QD=22.99;ReadPosRankSum=1.778;VQSLOD=3.1995;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,5:16:17.99:260,18,0	./.	./.	./.	1/1:1,4:5:9.03:165,9,0	1/1:6,6:12:18.06:318,18,0	1/1:3,1:4:3.01:56,3,0	1/1:29,1:30:37.28:458,37,0	1/1:2,1:3:6.02:117,6,0	1/1:2,5:7:11.54:154,12,0	1/1:1,3:5:9.03:144,9,0	1/1:4,3:7:9.03:166,9,0	1/1:2,2:4:3.01:56,3,0	1/1:2,2:4:6.02:110,6,0	1/1:4,4:8:12.04:218,12,0	1/1:3,3:6:9.03:167,9,0	1/1:11,7:18:21:316,21,0	1/1:4,1:5:3.01:57,3,0	1/1:3,3:6:11.56:208,12,0	0/1:3,2:5:35.97:119,0,36	./.	1/1:2,1:3:3.01:54,3,0	./.	./.	1/1:3,4:7:12.04:221,12,0	1/1:5,4:9:14.56:249,15,0	1/1:1,4:5:12.04:224,12,0	1/1:5,4:9:17.52:257,18,0
chr10	30046269	.	A	AAAC	15148.13	PASS	AB=0.571;AC=51;AF=0.911;AN=56;BaseQRankSum=-4.754;DP=468;FS=0.000;HRun=0;HaplotypeScore=60.8037;InbreedingCoeff=0.6246;MQ=70.39;MQ0=0;MQRankSum=-0.780;QD=35.64;ReadPosRankSum=4.967;VQSLOD=5.2538;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,27:30:45.15:937,45,0	1/1:0,3:3:9.03:189,9,0	0/0:21,0:12:28.25:0,28,356	0/0:22,0:19:28.57:0,29,384	1/1:4,17:21:10.35:829,10,0	1/1:3,16:19:30.10:628,30,0	1/1:2,11:13:12.04:251,12,0	1/1:9,14:25:6.58:680,7,0	1/1:0,15:16:33.11:672,33,0	1/1:2,9:11:27.08:529,27,0	1/1:1,6:7:17.98:324,18,0	1/1:4,10:14:18.06:376,18,0	1/1:1,11:13:30.10:629,30,0	1/1:0,17:17:42.14:879,42,0	1/1:3,22:25:39.13:817,39,0	1/1:0,14:14:36.04:754,36,0	1/1:2,25:28:42.14:880,42,0	1/1:0,11:12:17.55:323,18,0	1/1:5,9:14:26.98:385,27,0	1/1:4,16:20:45.04:817,45,0	0/1:6,17:24:46.42:353,0,46	1/1:1,4:5:8.95:137,9,0	1/1:0,7:7:18.06:377,18,0	1/1:2,29:32:57.20:1194,57,0	1/1:0,8:8:12.04:251,12,0	1/1:2,17:19:51.16:996,51,0	1/1:1,21:22:42.14:879,42,0	1/1:2,4:6:3.01:63,3,0
chr10	30048082	.	TGAAGTA	T	18098.81	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=3.147;DP=373;FS=32.395;HRun=0;HaplotypeScore=92.5071;InbreedingCoeff=0.8830;MQ=62.75;MQ0=3;MQRankSum=-7.963;QD=54.35;ReadPosRankSum=2.979;VQSLOD=3.1829;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,27:29:66.23:1491,66,0	1/1:0,3:3:9.03:213,9,0	0/0:15,0:14:42.14:0,42,1375	0/0:23,0:17:42.04:0,42,1286	1/1:2,18:20:48.16:1104,48,0	1/1:0,15:15:42.14:949,42,0	1/1:1,16:17:36.12:847,36,0	1/1:2,20:22:54.19:1253,54,0	1/1:2,6:8:18.06:411,18,0	1/1:2,12:14:36.12:849,36,0	1/1:0,6:6:18.06:422,18,0	1/1:1,7:8:24.08:551,24,0	1/1:1,12:13:30.10:709,30,0	1/1:1,9:10:24.08:567,24,0	1/1:4,8:12:15.05:354,15,0	1/1:2,11:13:30.10:708,30,0	1/1:3,12:15:36.12:821,36,0	1/1:2,12:14:39.13:907,39,0	1/1:2,8:10:24.07:496,24,0	1/1:0,12:12:30.10:673,30,0	1/1:1,10:10:12.04:283,12,0	1/1:2,12:14:33.11:774,33,0	1/1:0,15:15:32.92:751,33,0	1/1:2,6:8:14.61:354,15,0	1/1:2,10:12:30.10:694,30,0	1/1:1,13:14:39.10:856,39,0	1/1:0,13:14:39.13:921,39,0	1/1:1,3:4:6.02:142,6,0
chr10	30049756	.	TG	T	23989.89	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=2.120;DP=782;FS=2.890;HRun=2;HaplotypeScore=79.0162;InbreedingCoeff=0.9987;MQ=83.34;MQ0=1;MQRankSum=-5.919;QD=35.33;ReadPosRankSum=4.458;VQSLOD=5.3401;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,49:51:99:1753,135,0	1/1:0,7:7:21.07:273,21,0	0/0:20,0:20:54.11:0,54,749	0/0:28,0:27:81.21:0,81,1115	1/1:1,38:39:99:1437,111,0	1/1:1,21:22:60.19:776,60,0	1/1:2,27:29:75.24:974,75,0	1/1:3,34:37:99:1291,102,0	1/1:0,19:19:48.16:623,48,0	1/1:0,40:40:99:1491,120,0	1/1:1,20:21:54.17:699,54,0	1/1:0,34:34:96.31:1246,96,0	1/1:1,29:30:78.25:1012,78,0	1/1:0,19:19:51.17:662,51,0	1/1:1,24:25:66.21:857,66,0	1/1:0,32:32:87.28:1130,87,0	0/0:26,0:26:78.26:0,78,1166	0/0:29,0:29:84.27:0,84,1234	1/1:0,29:29:84.26:1076,84,0	1/1:0,33:33:96.27:1227,96,0	1/1:0,24:23:63.20:818,63,0	1/1:0,38:38:96.31:1238,96,0	1/1:1,27:28:74.15:972,74,0	1/1:2,25:27:75.24:973,75,0	1/1:0,27:27:75.24:973,75,0	1/1:0,26:26:78.25:1011,78,0	1/1:0,29:29:84.27:1090,84,0	1/1:0,13:13:30.10:389,30,0
chr10	30050525	.	G	GT	19334.89	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-12.621;DP=687;FS=6.890;HRun=6;HaplotypeScore=60.4100;InbreedingCoeff=0.9991;MQ=66.93;MQ0=0;MQRankSum=-2.701;QD=33.45;ReadPosRankSum=3.093;VQSLOD=4.8488;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,23:25:66.21:844,66,0	1/1:0,8:8:24.08:302,24,0	0/0:23,0:22:45.10:0,45,522	0/0:25,0:21:44.76:0,45,424	1/1:2,30:32:90.29:1132,90,0	1/1:0,23:23:63.20:793,63,0	1/1:0,20:20:54.17:679,54,0	1/1:3,28:31:84.26:1043,84,0	1/1:0,17:17:48.15:604,48,0	1/1:2,25:27:75.21:916,75,0	1/1:2,18:20:54.17:678,54,0	1/1:2,21:23:63.20:793,63,0	1/1:5,14:19:42.13:528,42,0	1/1:1,21:22:57.18:717,57,0	1/1:2,27:29:81.26:1019,81,0	1/1:0,26:26:75.24:944,75,0	0/0:24,0:23:44.45:0,44,648	0/0:37,0:37:98.81:0,99,993	1/1:3,19:22:51.15:629,51,0	1/1:2,28:30:84.27:1057,84,0	1/1:0,16:16:45.14:566,45,0	1/1:4,21:25:66.17:812,66,0	1/1:2,31:33:90.29:1130,90,0	1/1:0,19:19:45.14:566,45,0	1/1:3,37:40:99:1321,105,0	1/1:1,27:28:81.26:1019,81,0	1/1:3,28:31:72.23:905,72,0	1/1:1,11:12:27.09:338,27,0
chr10	30051820	.	GA	G	11234.27	PASS	AB=0.913;AC=49;AF=0.875;AN=56;BaseQRankSum=3.559;DP=619;FS=0.532;HRun=10;HaplotypeScore=84.4487;InbreedingCoeff=0.8712;MQ=80.84;MQ0=0;MQRankSum=-4.277;QD=19.95;ReadPosRankSum=4.266;VQSLOD=5.4572;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,16:20:44.98:391,45,0	1/1:1,9:10:23.99:208,24,0	0/1:19,2:21:5.37:5,0,349	0/0:17,0:17:18.04:0,18,194	1/1:6,27:34:77:657,77,0	1/1:1,29:30:74.98:651,75,0	1/1:2,11:13:32.98:286,33,0	1/1:10,18:28:53.95:469,54,0	1/1:4,24:28:68.73:585,69,0	1/1:1,28:29:80.97:703,81,0	1/1:4,32:36:59.79:747,60,0	1/1:2,18:20:53.98:469,54,0	1/1:1,15:16:38.99:339,39,0	1/1:1,17:18:50.99:443,51,0	1/1:3,23:26:65.99:573,66,0	1/1:4,18:22:50.98:443,51,0	0/0:21,0:20:54.10:0,54,576	0/0:18,0:18:42.10:0,42,455	1/1:5,20:25:59.96:520,60,0	1/1:1,25:26:71.97:625,72,0	1/1:2,10:12:20.99:182,21,0	1/1:4,19:23:56.98:495,57,0	1/1:3,15:18:41.99:365,42,0	1/1:4,20:24:50.98:443,51,0	1/1:1,19:20:50.99:443,51,0	1/1:5,17:22:50.97:439,51,0	1/1:4,31:35:65.83:573,66,0	1/1:0,7:7:21:182,21,0
chr10	30053268	.	TC	T	15110.06	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=2.780;DP=683;FS=6.743;HRun=6;HaplotypeScore=75.0942;InbreedingCoeff=0.9997;MQ=90.33;MQ0=0;MQRankSum=-7.830;QD=26.60;ReadPosRankSum=4.710;VQSLOD=5.1196;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,41:44:99:1160,108,0	1/1:0,13:13:36.03:372,36,0	0/0:33,0:33:73.95:0,74,888	0/0:32,0:30:61.23:0,61,712	1/1:0,26:26:75.12:781,75,0	1/1:3,21:24:51.13:548,51,0	1/1:0,20:20:42.11:451,42,0	1/1:4,22:26:66.12:679,66,0	1/1:1,25:26:63.16:676,63,0	1/1:2,25:27:72.13:748,72,0	1/1:0,16:16:47.97:476,48,0	1/1:4,28:32:66.16:709,66,0	1/1:4,22:26:45.11:483,45,0	1/1:4,29:33:63.16:677,63,0	1/1:0,14:14:42.11:451,42,0	1/1:1,24:25:57.14:612,57,0	0/0:36,0:36:99:0,102,1285	0/0:14,0:14:33.11:0,33,433	1/1:1,26:27:78.17:821,78,0	1/1:0,22:22:66.08:693,66,0	1/1:1,19:20:54.14:580,54,0	1/1:2,19:21:57.06:587,57,0	1/1:1,11:12:30.02:309,30,0	1/1:1,23:24:66.16:709,66,0	1/1:3,22:25:62.25:675,62,0	1/1:2,24:26:72.15:752,72,0	1/1:0,21:21:57.14:612,57,0	1/1:0,18:18:51.13:548,51,0
chr10	30054214	.	CACCA	C	27059.91	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=4.357;DP=682;FS=3.075;HRun=0;HaplotypeScore=134.9859;InbreedingCoeff=0.9980;MQ=87.75;MQ0=0;MQRankSum=-10.585;QD=46.26;ReadPosRankSum=6.045;VQSLOD=5.3983;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,43:43:99:2183,117,0	1/1:0,10:10:21.07:392,21,0	0/0:34,0:34:90.27:0,90,2147	0/0:23,0:23:63.22:0,63,1660	1/1:3,23:26:51.17:951,51,0	1/1:0,20:20:54.19:1008,54,0	1/1:0,14:14:36.12:672,36,0	1/1:4,32:36:96.32:1760,96,0	1/1:1,17:18:42.08:784,42,0	1/1:2,32:34:90.29:1640,90,0	1/1:2,15:17:42.14:783,42,0	1/1:3,23:26:60.21:1119,60,0	1/1:2,28:30:78.27:1454,78,0	1/1:2,27:29:75.23:1398,75,0	1/1:2,27:28:66.23:1231,66,0	1/1:2,21:23:60.21:1119,60,0	0/0:26,0:26:75.26:0,75,2000	0/0:14,0:14:42.14:0,42,1097	1/1:5,10:15:27.09:502,27,0	1/1:1,22:23:51.17:951,51,0	1/1:3,30:33:74.99:1399,75,0	1/1:3,25:28:69.24:1287,69,0	1/1:2,18:21:48.16:895,48,0	1/1:1,27:28:62.99:1175,63,0	1/1:1,20:21:60.21:1119,60,0	1/1:1,30:31:90.27:1615,90,0	1/1:0,22:22:63.22:1175,63,0	1/1:0,8:8:24.08:448,24,0
chr10	30054356	.	ATG	A	1590.24	PASS	AB=0.766;AC=14;AF=0.250;AN=56;BaseQRankSum=10.486;DP=840;FS=58.603;HRun=0;HaplotypeScore=205.3441;InbreedingCoeff=-0.3490;MQ=48.40;MQ0=22;MQRankSum=-4.253;QD=4.09;ReadPosRankSum=-3.419;VQSLOD=0.6051;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,19:44:30.42:0,30,481	0/0:12,0:12:5.56:0,6,60	0/0:56,0:18:48.11:0,48,819	0/0:62,0:26:59.33:0,59,1092	0/0:14,16:28:21.07:0,21,352	0/1:23,4:27:99:126,0,331	0/1:24,17:41:29.25:29,0,764	0/1:21,9:26:92.96:93,0,833	0/0:16,2:18:20.96:0,21,241	0/1:21,13:31:99:317,0,782	0/0:6,2:7:6.02:0,6,98	0/1:31,11:42:1.36:1,0,922	0/1:20,9:29:99:204,0,304	0/1:27,13:39:39.86:40,0,753	0/1:22,8:29:43.06:43,0,268	0/0:24,4:28:3.65:0,4,685	0/0:43,0:43:99:0,123,2280	0/0:29,0:29:44.83:0,45,1395	0/1:13,4:15:99:105,0,427	0/0:20,1:20:9.03:0,9,131	0/0:32,12:44:32.75:0,33,559	0/1:15,7:21:99:103,0,337	0/0:13,6:19:14.83:0,15,239	0/0:20,15:35:14.87:0,15,231	0/1:17,5:22:56.64:57,0,267	0/1:16,11:27:99:272,0,753	0/1:12,4:17:99:192,0,428	0/1:5,6:11:99:158,0,219
chr10	30054358	.	G	GCACACACACACACA	8411.42	PASS	AC=46;AF=0.852;AN=54;BaseQRankSum=2.902;DP=854;FS=1.138;HRun=0;HaplotypeScore=315.2744;InbreedingCoeff=0.6880;MQ=47.03;MQ0=21;MQRankSum=-2.928;QD=12.69;ReadPosRankSum=-1.561;VQSLOD=3.0413;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:47,0:45:10.98:95,11,0	1/1:1,11:14:2.88:201,3,0	0/0:53,0:16:16.60:0,17,213	0/0:60,0:24:4.16:0,4,64	1/1:32,0:30:1.65:21,2,0	1/1:28,0:28:20.28:439,20,0	1/1:42,0:42:17.59:235,18,0	1/1:32,0:27:37.08:464,37,0	1/1:7,0:17:6.02:211,6,0	1/1:33,0:30:65.73:942,66,0	./.	1/1:40,0:41:35.45:742,35,0	1/1:27,1:28:31.78:606,32,0	1/1:42,0:41:25.92:341,26,0	1/1:29,2:30:13.67:359,14,0	1/1:25,2:27:24.38:759,24,0	0/0:39,0:41:99:0,102,3022	0/0:26,0:29:66.32:0,66,2073	1/1:19,0:17:29.91:323,30,0	1/1:4,19:27:2.81:201,3,0	1/1:45,0:45:20.36:229,20,0	1/1:23,0:22:13:273,13,0	1/1:20,0:20:2.64:24,3,0	1/1:33,0:34:5.60:46,6,0	1/1:21,0:24:7.38:296,7,0	1/1:28,0:28:48.36:786,48,0	1/1:17,0:17:29.72:456,30,0	1/1:11,0:11:17.94:362,18,0
chr10	30055012	.	A	AT	18479.56	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-8.208;DP=732;FS=2.676;HRun=8;HaplotypeScore=67.9816;InbreedingCoeff=0.9757;MQ=73.03;MQ0=0;MQRankSum=-3.546;QD=27.38;ReadPosRankSum=1.745;VQSLOD=5.6671;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,36:40:65.81:1011,66,0	1/1:2,11:13:33.10:381,33,0	0/0:14,0:13:17.99:0,18,162	0/0:11,0:11:7.78:0,8,151	1/1:6,23:29:47.75:798,48,0	1/1:1,21:22:54.16:623,54,0	1/1:3,23:26:57.17:658,57,0	1/1:10,24:35:72.02:790,72,0	1/1:3,29:32:78.23:900,78,0	1/1:4,28:32:84.25:969,84,0	1/1:5,17:22:54.07:593,54,0	1/1:5,28:33:75.22:863,75,0	1/1:3,23:26:60.18:692,60,0	1/1:8,22:31:63.02:706,63,0	1/1:4,27:31:69.21:796,69,0	1/1:4,36:40:99:1177,102,0	0/0:18,0:18:53.98:0,54,481	0/0:14,0:14:33.01:0,33,302	1/1:2,28:30:84.23:959,84,0	1/1:5,22:27:57.17:658,57,0	1/1:2,17:19:48.14:554,48,0	1/1:3,34:37:90.27:1039,90,0	1/1:4,16:20:51.15:584,51,0	1/1:1,19:20:60.18:691,60,0	1/1:3,18:21:54.16:623,54,0	1/1:8,37:45:39.20:1201,39,0	1/1:4,32:35:81.24:934,81,0	1/1:0,8:8:24.07:277,24,0
chr10	30056497	.	TTGTGTGTGTGTGTGTGTGTG	T	6703.85	PASS	AB=0.862;AC=40;AF=0.741;AN=54;BaseQRankSum=4.571;DP=586;FS=18.113;HRun=0;HaplotypeScore=250.5261;InbreedingCoeff=0.0754;MQ=67.58;MQ0=22;MQRankSum=-1.003;QD=14.14;ReadPosRankSum=-1.837;VQSLOD=1.9210;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:29:38.07:251,0,38	1/1:13,0:12:2.02:188,2,0	0/0:32,0:23:6.02:0,6,127	0/0:34,0:23:6.02:0,6,108	0/1:14,9:24:13.80:75,0,14	1/1:6,12:20:15.05:677,15,0	1/1:6,8:14:6.02:188,6,0	0/1:32,0:32:1.81:92,0,2	1/1:10,6:16:9.03:360,9,0	1/1:18,12:29:30.03:654,30,0	1/1:3,12:16:8.43:50,8,0	1/1:13,7:17:12:438,12,0	1/1:8,9:17:2.64:160,3,0	1/1:7,19:25:17.20:834,17,0	1/1:12,8:20:2.35:469,2,0	1/1:8,14:22:1.31:473,1,0	0/1:20,0:18:2.08:2,0,293	0/0:20,0:20:4.75:0,5,470	1/1:18,0:17:14.91:190,15,0	1/1:4,5:8:8.35:68,8,0	0/1:24,0:23:3.04:111,0,3	1/1:14,8:23:14.86:390,15,0	1/1:6,7:13:2.97:20,3,0	./.	0/1:7,14:21:9.93:109,0,10	0/1:9,12:21:86.53:548,0,87	0/1:14,0:14:27.93:198,0,28	1/1:2,3:5:3.01:159,3,0
chr10	30056658	.	TGAG	T	26706.86	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=10.567;DP=703;FS=0.421;HRun=0;HaplotypeScore=163.6533;InbreedingCoeff=0.9997;MQ=82.98;MQ0=0;MQRankSum=-10.363;QD=44.00;ReadPosRankSum=4.686;VQSLOD=6.1215;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,42:41:99:1649,99,0	1/1:1,10:11:30.10:500,30,0	0/0:20,0:20:54.19:0,54,1194	0/0:30,0:30:72.16:0,72,1516	1/1:1,28:29:72.25:1195,72,0	1/1:1,14:15:39.13:648,39,0	1/1:1,19:20:57.19:949,57,0	1/1:4,26:30:75.26:1249,75,0	1/1:1,19:20:54.18:899,54,0	1/1:1,26:27:78.27:1298,78,0	1/1:1,16:17:45.15:749,45,0	1/1:0,36:36:99:1697,102,0	1/1:1,21:21:57.19:949,57,0	1/1:1,24:25:63.22:1048,63,0	1/1:4,50:54:99:2347,141,0	1/1:1,22:22:63.22:1049,63,0	0/0:30,0:30:87.30:0,87,1943	0/0:16,0:16:45.14:0,45,943	1/1:1,15:16:45.12:698,45,0	1/1:2,21:23:60.21:998,60,0	1/1:3,30:33:78.27:1298,78,0	1/1:2,29:31:87.30:1444,87,0	1/1:1,17:18:42.14:699,42,0	1/1:0,17:17:45.15:750,45,0	1/1:1,24:25:66.23:1099,66,0	1/1:0,34:34:99:1699,102,0	1/1:0,28:28:78.27:1298,78,0	1/1:0,10:10:30.10:500,30,0
chr10	30057676	.	A	AT	16411.56	PASS	AB=0.576;AC=47;AF=0.839;AN=56;BaseQRankSum=-11.447;DP=664;FS=0.453;HRun=8;HaplotypeScore=56.8139;InbreedingCoeff=0.8801;MQ=76.88;MQ0=0;MQRankSum=-4.265;QD=28.54;ReadPosRankSum=2.361;VQSLOD=5.2771;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,38:42:99:1272,111,0	1/1:1,14:15:39.12:450,39,0	0/0:14,0:14:26.98:0,27,243	0/0:16,0:15:32.78:0,33,293	1/1:2,36:38:99:1211,105,0	1/1:5,18:23:26.69:561,27,0	1/1:2,21:23:60.18:692,60,0	1/1:10,23:33:69.20:789,69,0	1/1:1,11:12:30.06:332,30,0	1/1:4,24:28:47.73:791,48,0	1/1:6,19:25:57.17:658,57,0	0/1:5,14:19:6.79:435,0,7	1/1:3,23:26:60.18:692,60,0	1/1:3,27:30:47.76:804,48,0	1/1:2,16:18:48.14:554,48,0	1/1:0,21:21:54.16:623,54,0	0/0:35,0:35:93.02:0,93,842	0/0:22,0:24:53.05:0,53,473	1/1:6,12:18:11.65:388,12,0	1/1:2,18:20:54.09:595,54,0	1/1:1,24:25:63.19:727,63,0	1/1:3,18:21:57.15:647,57,0	1/1:3,22:25:63.19:727,63,0	1/1:2,17:19:51.15:589,51,0	1/1:2,16:18:48.14:554,48,0	1/1:2,22:24:66.20:762,66,0	1/1:4,34:38:99:1142,99,0	1/1:1,13:14:36.11:415,36,0
chr10	30058413	.	GGA	G	19350.05	PASS	AB=0.545;AC=47;AF=0.839;AN=56;BaseQRankSum=5.496;DP=741;FS=1.869;HRun=0;HaplotypeScore=95.0951;InbreedingCoeff=0.9033;MQ=88.67;MQ0=1;MQRankSum=-6.507;QD=31.26;ReadPosRankSum=4.440;VQSLOD=6.6822;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,40:44:99:1365,105,0	1/1:3,10:13:30.10:390,30,0	0/0:37,0:36:69.18:0,69,1026	0/0:35,0:31:73.80:0,74,1157	1/1:2,25:27:72.23:936,72,0	1/1:2,21:23:57.19:742,57,0	1/1:2,25:27:69.22:898,69,0	1/1:8,30:38:90.25:1119,90,0	1/1:3,24:27:60.20:780,60,0	1/1:3,18:21:54.17:700,54,0	1/1:1,16:17:42.14:545,42,0	1/1:3,25:27:60.19:774,60,0	1/1:2,28:30:69.22:897,69,0	1/1:2,20:22:48.16:624,48,0	1/1:1,34:35:90.29:1171,90,0	1/1:2,28:30:72.23:936,72,0	0/0:39,0:39:99:0,108,1770	0/0:11,0:11:27.09:0,27,459	1/1:4,19:23:57.18:741,57,0	1/1:5,25:29:72.23:936,72,0	1/1:2,29:31:75.24:976,75,0	1/1:1,13:14:39.13:507,39,0	1/1:3,16:19:39.13:508,39,0	1/1:4,22:26:57.18:741,57,0	1/1:4,16:20:42.14:546,42,0	1/1:3,32:35:96.31:1246,96,0	1/1:5,28:33:84.27:1092,84,0	0/1:1,5:6:3.85:177,0,4
chr10	30058682	.	AT	A	12838.37	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=5.378;DP=594;FS=6.098;HRun=8;HaplotypeScore=59.4411;InbreedingCoeff=0.9764;MQ=74.45;MQ0=0;MQRankSum=-3.199;QD=24.27;ReadPosRankSum=3.581;VQSLOD=5.6431;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,28:29:72.07:686,72,0	1/1:2,12:14:33.05:319,33,0	0/0:15,0:15:7.49:0,7,283	0/0:10,0:10:24.07:0,24,283	1/1:5,30:35:90.09:859,90,0	1/1:1,30:31:72.11:695,72,0	1/1:2,25:27:65.85:637,66,0	1/1:0,17:17:51.04:478,51,0	1/1:4,16:20:45.07:435,45,0	1/1:1,15:16:44.97:413,45,0	1/1:0,23:23:66.10:637,66,0	1/1:4,20:24:60.09:579,60,0	1/1:2,26:28:68.96:666,69,0	1/1:1,14:15:39.06:377,39,0	1/1:4,18:22:48.07:463,48,0	1/1:1,19:20:48.08:463,48,0	0/0:28,0:28:72.22:0,72,870	0/0:12,0:12:36.05:0,36,394	1/1:2,21:23:63.03:584,63,0	1/1:4,23:27:66.10:637,66,0	1/1:1,19:20:45.07:435,45,0	1/1:0,11:11:27.04:259,27,0	1/1:0,17:17:45.07:435,45,0	1/1:1,14:15:36.06:348,36,0	1/1:4,18:22:45.07:435,45,0	1/1:3,25:28:75.11:724,75,0	1/1:0,34:34:99:956,99,0	1/1:0,11:11:33.05:319,33,0
chr10	30059082	.	A	AG	9440.42	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-2.072;DP=572;FS=5.329;HRun=2;HaplotypeScore=100.3505;InbreedingCoeff=0.9924;MQ=73.52;MQ0=1;MQRankSum=-2.765;QD=19.31;ReadPosRankSum=-0.450;VQSLOD=4.6398;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:21,4:25:60.88:542,61,0	1/1:9,0:9:17.56:117,18,0	0/0:31,0:23:33.62:0,34,326	0/0:15,0:12:24.43:0,24,168	1/1:29,4:33:83.07:688,83,0	1/1:18,0:18:38.12:273,38,0	1/1:15,4:19:52.11:414,52,0	1/1:37,1:37:95.04:769,95,0	1/1:15,0:15:37.73:295,38,0	1/1:21,1:22:59.50:508,59,0	1/1:22,1:23:50.72:463,51,0	1/1:17,2:18:43.99:367,44,0	1/1:11,2:13:30.68:259,31,0	1/1:14,1:15:35.22:268,35,0	1/1:24,0:23:53.40:449,53,0	1/1:19,0:19:47.19:354,47,0	0/0:21,0:21:37.70:0,38,268	0/0:16,0:15:20.36:0,20,223	1/1:20,1:21:52.97:428,53,0	1/1:33,1:34:87.62:731,88,0	1/1:28,0:28:55.34:506,55,0	1/1:14,0:14:33.68:279,34,0	1/1:14,1:15:30.46:186,30,0	1/1:21,2:23:49.67:395,50,0	1/1:10,4:14:34.78:324,35,0	1/1:14,1:15:33.35:309,33,0	1/1:21,3:22:52.85:384,53,0	1/1:9,0:9:17.37:133,17,0
chr10	30059101	.	TC	T	6856	PASS	AB=0.966;AC=49;AF=0.875;AN=56;BaseQRankSum=-0.993;DP=542;FS=17.238;HRun=2;HaplotypeScore=88.4227;InbreedingCoeff=0.8044;MQ=73.57;MQ0=2;MQRankSum=-2.779;QD=13.77;ReadPosRankSum=0.744;VQSLOD=2.8899;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:24,1:25:45.68:296,46,0	1/1:6,0:6:15.11:102,15,0	0/1:27,1:19:10.06:10,0,181	0/0:14,1:11:15.99:0,16,159	1/1:27,3:31:45.58:327,46,0	1/1:17,3:20:40.31:339,40,0	1/1:17,1:19:43.85:330,44,0	1/1:25,0:25:58.46:402,58,0	1/1:14,1:15:33.85:218,34,0	1/1:17,2:19:42.39:328,42,0	1/1:15,1:16:32.63:214,33,0	1/1:23,4:26:58.73:455,59,0	1/1:12,2:14:28.60:221,29,0	1/1:14,1:15:28.02:169,28,0	1/1:23,1:24:44.67:370,45,0	1/1:17,2:19:37.76:317,38,0	0/0:15,0:15:26.97:0,27,232	0/0:14,0:13:35.85:0,36,306	1/1:16,0:16:35.28:247,35,0	1/1:30,2:33:58.83:403,59,0	1/1:17,2:19:22.93:198,23,0	1/1:12,1:13:24.09:159,24,0	1/1:13,1:15:35.93:247,36,0	1/1:20,3:23:43.18:297,43,0	1/1:18,2:20:38.35:294,38,0	1/1:25,1:26:62.24:541,62,0	1/1:24,1:24:54.97:361,55,0	1/1:5,0:5:2.92:8,3,0
chr10	30059248	.	C	CCACA	6249.81	PASS	AB=0.632;AC=45;AF=0.833;AN=54;BaseQRankSum=-1.708;DP=569;FS=8.688;HRun=0;HaplotypeScore=106.9400;InbreedingCoeff=0.6838;MQ=62.28;MQ0=17;MQRankSum=1.833;QD=13.47;ReadPosRankSum=0.878;VQSLOD=3.6551;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:24:30.55:441,31,0	1/1:10,0:10:21.07:366,21,0	0/0:33,0:15:19.30:0,19,259	0/0:27,0:10:15.51:0,16,192	1/1:26,0:26:21.07:349,21,0	1/1:10,0:17:0.47:1,0,0	1/1:6,16:22:6.02:109,6,0	1/1:30,0:31:45.49:592,45,0	1/1:5,9:16:8.99:98,9,0	1/1:15,0:15:33.07:547,33,0	1/1:19,1:22:27.07:425,27,0	1/1:11,10:20:3.01:74,3,0	1/1:9,14:22:17.88:297,18,0	1/1:13,0:13:21.04:355,21,0	0/1:10,13:24:0:0,0,0	1/1:3,15:19:4.26:43,4,0	0/0:7,0:19:17.29:0,17,164	0/0:16,0:17:44.99:0,45,567	1/1:12,0:13:21.06:337,21,0	1/1:13,0:35:2.85:43,3,0	1/1:5,0:14:1.82:5,2,0	1/1:7,2:11:12.51:219,13,0	1/1:14,0:13:24.08:396,24,0	./.	1/1:10,15:25:6.01:102,6,0	1/1:10,0:33:72.77:1268,73,0	1/1:12,0:30:5.93:101,6,0	1/1:2,0:2:6.02:84,6,0
chr10	30059301	.	GAC	G	634.21	PASS	AB=0.955;AC=11;AF=0.196;AN=56;BaseQRankSum=5.404;DP=543;FS=42.892;HRun=0;HaplotypeScore=108.4061;InbreedingCoeff=-0.1777;MQ=45.81;MQ0=29;MQRankSum=0.491;QD=3.24;ReadPosRankSum=-1.383;VQSLOD=0.7080;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:19:1.69:0,2,171	0/1:14,1:15:49.39:49,0,144	0/0:13,0:1:2.97:0,3,20	0/0:16,0:1:2.92:0,3,17	0/1:22,2:23:12.38:12,0,163	0/0:17,2:19:15.39:0,15,115	0/0:25,0:21:21.29:0,21,171	0/0:24,0:23:6.52:0,7,232	0/0:15,0:15:25.38:0,25,199	0/0:28,0:27:31.78:0,32,376	0/1:21,1:20:11.89:12,0,139	0/0:22,0:21:14.73:0,15,215	0/1:22,0:20:84.48:88,0,84	0/1:17,1:16:21.69:22,0,143	0/0:21,0:21:27.60:0,28,221	0/0:16,0:15:17.56:0,18,163	1/1:18,0:18:1:267,1,0	0/1:18,1:19:41.08:292,0,41	0/0:15,0:14:1.02:0,1,210	0/0:26,0:25:4.38:0,4,178	0/0:16,0:13:14.90:0,15,156	0/0:10,0:10:2.36:0,2,45	0/1:15,1:14:9.30:9,0,42	0/1:13,0:13:8.83:9,0,140	0/0:26,0:24:37.52:0,38,284	0/0:23,0:23:7.30:0,7,349	0/1:27,2:28:7.59:8,0,312	0/0:11,0:11:13.71:0,14,136
chr10	30061764	.	C	CTT	3731.34	PASS	AB=0.705;AC=49;AF=0.875;AN=56;BaseQRankSum=-1.778;DP=674;FS=8.211;HRun=13;HaplotypeScore=117.6533;InbreedingCoeff=0.1785;MQ=73.84;MQ0=3;MQRankSum=-0.059;QD=5.83;ReadPosRankSum=2.576;VQSLOD=0.4189;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:22:11.38:94,11,0	0/1:6,0:14:19.96:25,0,20	0/0:32,0:17:17.34:0,17,125	0/1:36,0:28:4.42:4,0,163	1/1:28,0:38:11.03:195,11,0	1/1:8,1:24:32.34:190,32,0	1/1:11,0:23:22.66:138,23,0	1/1:11,2:32:36.92:231,37,0	0/1:6,1:16:28.47:53,0,28	1/1:3,1:18:34.15:177,34,0	1/1:6,1:23:37.82:205,38,0	1/1:3,0:17:9.98:35,10,0	1/1:15,1:23:14.39:194,14,0	1/1:14,0:27:50.41:274,50,0	1/1:8,4:25:10.96:214,11,0	1/1:8,0:23:2.41:61,2,0	0/1:9,1:34:39.38:87,0,39	1/1:2,0:14:14.97:52,15,0	1/1:6,0:24:23.52:202,24,0	1/1:6,1:23:24.85:199,25,0	1/1:10,1:21:20.48:101,20,0	1/1:10,1:17:5.53:132,6,0	0/1:11,1:23:11.48:33,0,11	1/1:8,0:19:26.67:91,27,0	1/1:7,15:26:31.10:287,31,0	1/1:10,1:23:7.30:114,7,0	1/1:12,2:34:21.10:226,21,0	1/1:5,0:13:24.53:114,25,0
chr10	30062506	.	T	TTTTC	18206.53	PASS	AC=54;AF=0.964;AN=56;BaseQRankSum=-1.183;DP=488;FS=0.000;HRun=0;HaplotypeScore=83.9132;InbreedingCoeff=0.5601;MQ=54.28;MQ0=3;MQRankSum=-1.218;QD=38.90;ReadPosRankSum=1.708;VQSLOD=4.9330;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,7:15:26.42:541,26,0	1/1:5,6:11:18.06:438,18,0	1/1:18,0:5:0.88:2,1,0	0/0:20,0:7:0:0,0,0	1/1:13,15:28:54.17:1195,54,0	1/1:8,6:14:33.10:647,33,0	1/1:8,3:11:21.22:434,21,0	1/1:28,0:27:39.13:619,39,0	1/1:5,8:13:27.09:622,27,0	1/1:12,13:25:60.20:1278,60,0	1/1:11,8:19:42.14:944,42,0	1/1:8,4:12:21.07:439,21,0	1/1:9,4:13:33.10:656,33,0	1/1:6,6:12:24.08:567,24,0	1/1:6,7:13:27.09:588,27,0	1/1:8,6:14:24.08:519,24,0	1/1:12,0:13:11.70:124,12,0	1/1:10,0:10:10.74:122,11,0	1/1:12,6:18:30.10:696,30,0	1/1:13,9:22:45.15:1018,45,0	1/1:5,9:14:14.41:300,14,0	1/1:7,6:13:30.10:630,30,0	1/1:12,13:24:45.15:1014,45,0	1/1:9,4:13:21.07:455,21,0	1/1:13,11:24:48.15:984,48,0	1/1:13,16:29:69.23:1516,69,0	1/1:12,9:22:45.15:942,45,0	1/1:7,11:18:39.13:914,39,0
chr10	30062549	.	TTTTC	T	9674.48	PASS	AB=0.950;AC=48;AF=0.889;AN=54;BaseQRankSum=1.983;DP=536;FS=4.725;HRun=0;HaplotypeScore=147.0382;InbreedingCoeff=0.4401;MQ=44.64;MQ0=21;MQRankSum=-0.483;QD=22.66;ReadPosRankSum=1.465;VQSLOD=4.7508;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:11,5:16:20.85:293,21,0	1/1:6,3:9:14.97:189,15,0	0/0:38,0:6:0.47:0,0,1	./.	1/1:10,16:26:54.01:834,54,0	1/1:8,6:14:27.05:356,27,0	1/1:10,1:11:15.05:232,15,0	1/1:21,20:34:57.17:795,57,0	1/1:8,3:10:12.03:171,12,0	1/1:14,11:24:42.11:625,42,0	1/1:8,9:17:33.08:486,33,0	1/1:6,9:15:33.10:504,33,0	1/1:6,7:13:30.08:419,30,0	1/1:7,2:9:12.04:174,12,0	1/1:8,3:11:15.05:228,15,0	1/1:6,6:12:24.07:357,24,0	0/1:26,0:26:16.76:17,0,1020	0/0:14,0:13:31.96:0,32,633	1/1:10,0:8:6.02:74,6,0	1/1:13,7:20:39.09:531,39,0	1/1:6,3:9:11.93:162,12,0	1/1:8,5:13:21.07:310,21,0	1/1:14,5:19:27.05:353,27,0	0/1:8,1:9:23.82:87,0,24	1/1:9,9:18:36.09:515,36,0	1/1:15,11:26:36.12:572,36,0	1/1:12,19:31:69.21:1059,69,0	1/1:9,6:15:21.07:333,21,0
chr10	30062602	.	TTTTC	T	11350.66	PASS	AB=1.000;AC=47;AF=0.870;AN=54;BaseQRankSum=-5.331;DP=532;FS=5.604;HRun=0;HaplotypeScore=130.7223;InbreedingCoeff=0.6811;MQ=53.41;MQ0=22;MQRankSum=4.920;QD=27.48;ReadPosRankSum=-0.031;VQSLOD=4.3073;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,6:13:6.37:234,6,0	1/1:6,4:10:18.05:272,18,0	0/0:46,0:12:6.02:0,6,67	./.	1/1:17,10:25:42.07:613,42,0	1/1:8,7:15:20.74:344,21,0	1/1:4,5:9:21.06:320,21,0	0/1:30,0:27:22.34:334,0,22	1/1:4,10:13:26.76:442,27,0	1/1:12,9:20:29.90:490,30,0	1/1:8,12:20:45.13:689,45,0	1/1:7,11:18:32.69:576,33,0	1/1:8,10:17:26.01:523,26,0	1/1:2,7:8:18.06:295,18,0	1/1:4,11:15:39.12:616,39,0	1/1:5,20:25:59.87:982,60,0	0/0:21,0:22:22.40:0,22,220	0/0:10,0:9:8.89:0,9,62	1/1:7,7:10:21.07:344,21,0	1/1:6,15:20:39.69:717,40,0	1/1:4,2:6:6.02:98,6,0	1/1:3,5:8:18.06:295,18,0	1/1:8,11:17:30.10:491,30,0	1/1:7,4:10:9.86:209,10,0	1/1:7,7:14:7.27:325,7,0	1/1:10,10:19:39.13:629,39,0	1/1:14,21:35:72.24:1146,72,0	1/1:12,9:20:24.06:368,24,0
chr10	30062677	.	TTTTCTTTCTTTCTTTCTTTC	T	13016.61	PASS	AB=0.976;AC=47;AF=0.870;AN=54;BaseQRankSum=-2.157;DP=405;FS=5.782;HRun=0;HaplotypeScore=176.8840;InbreedingCoeff=0.1209;MQ=43.21;MQ0=28;MQRankSum=1.738;QD=36.26;ReadPosRankSum=1.710;VQSLOD=3.7942;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:9,0:8:12.02:280,12,0	1/1:4,2:6:12.04:486,12,0	./.	0/1:45,0:3:0:0,0,0	1/1:13,2:12:18.06:672,18,0	1/1:7,0:6:6.02:268,6,0	0/1:9,0:8:99:291,0,149	1/1:23,0:16:6.02:109,6,0	1/1:9,1:10:18.01:453,18,0	1/1:14,0:14:21.05:452,21,0	1/1:12,1:13:9.03:245,9,0	1/1:7,4:11:21.07:821,21,0	1/1:18,0:17:18.06:404,18,0	1/1:6,1:6:9.03:339,9,0	1/1:8,2:8:18.05:679,18,0	1/1:17,0:17:12.01:306,12,0	0/1:16,1:17:99:754,0,363	0/1:15,0:12:99:552,0,153	0/1:13,1:13:0.08:594,0,0	1/1:9,1:9:18.06:567,18,0	1/1:6,0:5:3.01:124,3,0	1/1:3,2:4:6.02:316,6,0	1/1:10,0:7:3.01:134,3,0	0/0:6,1:6:3:0,3,26	1/1:8,4:12:27.09:1179,27,0	1/1:17,2:17:27.09:1067,27,0	1/1:19,3:21:27.08:973,27,0	1/1:12,3:14:21.07:952,21,0
chr10	30062694	.	TTTC	T	2546.17	PASS	AB=0.960;AC=25;AF=0.463;AN=54;BaseQRankSum=1.649;DP=349;FS=1.604;HRun=0;HaplotypeScore=123.4708;InbreedingCoeff=-0.7205;MQ=37.41;MQ0=20;MQRankSum=-4.862;QD=8.63;ReadPosRankSum=-3.141;VQSLOD=2.6729;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:11,1:11:76.66:93,0,77	0/1:7,0:7:27.86:28,0,47	./.	0/0:21,0:1:2.22:0,2,7	0/1:17,2:18:36:253,0,36	0/1:7,0:6:67.58:68,0,90	0/1:8,0:7:64.89:65,0,149	0/1:14,0:9:58.49:58,0,192	0/1:10,0:10:80.19:80,0,177	0/1:14,1:15:99:137,0,268	0/1:8,0:8:1.25:1,0,102	0/1:8,0:8:70.86:103,0,71	0/0:14,0:14:27.06:0,27,307	0/1:4,1:5:23.98:79,0,24	0/1:14,0:12:99:158,0,146	0/1:10,0:10:52.86:53,0,225	0/1:22,3:25:99:254,0,369	0/1:17,2:15:99:148,0,261	0/1:9,1:8:58.41:58,0,108	0/1:10,1:11:99:142,0,115	0/0:5,0:4:9.02:0,9,100	1/1:6,0:5:8.88:78,9,0	0/1:10,1:9:78.31:140,0,78	0/1:9,0:9:19.51:20,0,83	0/1:17,0:17:99:238,0,167	0/1:14,1:14:99:110,0,255	0/1:24,0:23:99:292,0,259	0/1:11,0:10:38.75:39,0,97
chr10	30062697	.	C	CT	2911.04	PASS	AB=0.818;AC=21;AF=0.404;AN=52;BaseQRankSum=-2.915;DP=338;FS=9.669;HRun=3;HaplotypeScore=113.1797;InbreedingCoeff=-0.6594;MQ=37.20;MQ0=19;MQRankSum=-1.886;QD=10.82;ReadPosRankSum=-5.904;VQSLOD=-0.5458;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:11,2:12:73.63:177,0,74	0/0:5,1:6:10.46:0,10,87	./.	./.	0/1:10,7:16:44.28:303,0,44	0/1:5,2:6:66.15:66,0,93	0/1:6,2:7:63.32:63,0,125	0/1:11,7:13:99:193,0,146	0/1:6,2:8:95.79:96,0,155	0/1:13,3:16:99:193,0,244	0/0:6,0:6:12.99:0,13,108	0/1:7,1:9:71.83:83,0,72	0/0:11,0:11:27.04:0,27,298	0/1:6,0:6:23.97:98,0,24	0/1:10,3:11:97.09:168,0,97	0/1:7,2:9:95.41:95,0,188	0/1:22,4:26:99:221,0,267	0/1:15,4:15:99:136,0,224	0/1:9,1:8:83.61:84,0,96	0/1:6,4:10:99:176,0,139	0/0:5,0:4:6.02:0,6,69	0/1:4,1:4:2.92:41,0,3	0/1:7,4:9:17.94:183,0,18	0/1:6,2:8:22.39:22,0,44	0/1:11,5:16:99:203,0,189	0/1:15,1:15:99:132,0,247	0/1:16,8:23:99:329,0,234	0/0:10,0:9:18.70:0,19,165
chr10	30062720	.	TC	T	861.27	PASS	AB=0.880;AC=20;AF=0.357;AN=56;BaseQRankSum=9.024;DP=357;FS=11.483;HRun=1;HaplotypeScore=112.2581;InbreedingCoeff=-0.5496;MQ=42.25;MQ0=20;MQRankSum=-7.726;QD=3.76;ReadPosRankSum=0.651;VQSLOD=-0.7486;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:15,0:14:15.13:15,0,317	0/1:4,1:5:29.73:30,0,76	0/0:27,1:3:3:0,3,27	0/0:30,0:3:0.47:0,0,1	0/0:16,0:15:22.98:0,23,509	0/1:6,2:7:58.25:58,0,187	0/1:6,3:8:55.82:56,0,214	0/0:23,0:20:52.98:0,53,700	0/0:5,0:5:12.51:0,13,162	0/0:13,0:13:19.82:0,20,432	0/1:3,0:3:26.78:27,0,75	0/1:7,1:8:59.02:59,0,93	0/1:6,1:7:46.36:46,0,188	0/0:6,0:6:14.47:0,14,195	0/1:9,2:10:60.59:61,0,181	0/1:8,1:9:13.60:14,0,250	0/1:24,1:25:34.51:35,0,438	0/1:20,2:18:58.51:59,0,400	0/1:11,2:11:49.46:49,0,279	0/1:15,1:16:32.14:32,0,507	0/1:2,2:3:30:30,0,74	0/1:6,0:6:21.16:21,0,151	0/0:7,0:6:18.06:0,18,257	0/1:8,0:8:1.81:2,0,148	0/1:17,2:19:99:141,0,415	0/1:12,3:14:81.87:82,0,348	0/1:17,1:18:76.66:77,0,466	0/1:4,4:8:24.72:122,0,25
chr10	30062749	.	T	TTTCC	924.22	PASS	AB=0.748;AC=3;AF=0.054;AN=56;BaseQRankSum=-2.622;DP=477;FS=3.392;HRun=0;HaplotypeScore=142.6279;InbreedingCoeff=-0.0522;MQ=53.40;MQ0=12;MQRankSum=-1.582;QD=9.94;ReadPosRankSum=2.248;VQSLOD=3.2622;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:18:42.43:0,42,611	0/0:6,0:6:17.95:0,18,243	0/0:40,0:7:11.55:0,12,123	0/1:37,0:7:3.97:4,0,28	0/0:23,0:21:60.01:0,60,895	0/0:8,0:8:21.07:0,21,374	0/0:14,0:13:39.01:0,39,583	0/0:21,0:18:51.08:0,51,630	0/0:13,0:13:36.08:0,36,622	0/0:23,0:22:63.13:0,63,1054	0/0:7,0:7:18.93:0,19,308	0/0:16,0:15:43.60:0,44,683	0/0:12,0:11:33.11:0,33,598	0/0:11,0:11:30.53:0,31,494	0/0:18,0:17:51.06:0,51,801	0/0:18,0:17:48.98:0,49,854	0/1:11,16:29:20.69:644,0,21	0/1:11,15:25:65.23:368,0,65	0/0:13,0:10:29.88:0,30,339	0/0:20,0:20:57.19:0,57,943	0/0:3,0:2:5.92:0,6,39	0/0:10,0:10:27.86:0,28,401	0/0:9,0:8:23.98:0,24,341	0/0:11,0:11:20.10:0,20,316	0/0:19,0:19:55.34:0,55,884	0/0:21,0:21:63.14:0,63,1051	0/0:25,0:25:75.05:0,75,1133	0/0:4,0:4:11.92:0,12,117
chr10	30062768	.	CTT	C	7805.44	PASS	AC=46;AF=0.852;AN=54;BaseQRankSum=-7.283;DP=489;FS=29.895;HRun=12;HaplotypeScore=88.6816;InbreedingCoeff=0.8834;MQ=60.32;MQ0=11;MQRankSum=2.042;QD=19.76;ReadPosRankSum=2.226;VQSLOD=1.9763;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,21:24:42.01:427,42,0	1/1:1,7:7:9:92,9,0	0/0:16,0:5:8.38:0,8,57	0/0:23,0:9:14.69:0,15,127	1/1:7,19:24:44.64:437,45,0	1/1:1,8:10:23.82:227,24,0	1/1:0,15:13:39.09:397,39,0	1/1:4,17:16:33.03:328,33,0	1/1:1,16:16:35.82:348,36,0	1/1:4,21:23:60.10:602,60,0	1/1:1,10:11:24.03:244,24,0	1/1:2,15:16:42.09:427,42,0	1/1:1,14:12:36.08:366,36,0	1/1:3,13:16:32.97:336,33,0	1/1:2,18:18:42.09:427,42,0	1/1:2,18:20:21.06:440,21,0	0/0:28,0:28:17.71:0,18,539	0/0:24,0:23:26.71:0,27,321	1/1:5,10:10:20.98:202,21,0	1/1:6,17:23:50.15:471,50,0	./.	1/1:2,9:11:18.01:183,18,0	1/1:3,8:9:17.62:162,18,0	1/1:4,8:13:7.49:141,7,0	1/1:5,15:19:39.04:397,39,0	1/1:4,22:26:54.03:542,54,0	1/1:5,21:24:57.06:580,57,0	1/1:1,1:2:3.01:31,3,0
chr10	30063379	.	T	TAC	1023.83	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-5.189;DP=623;FS=0.765;HRun=0;HaplotypeScore=71.9148;InbreedingCoeff=0.9806;MQ=65.52;MQ0=0;MQRankSum=-1.083;QD=22.75;ReadPosRankSum=-0.018;VQSLOD=3.7225;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:48.15:0,48,587	0/0:11,0:11:33.08:0,33,389	0/0:15,0:11:12.78:0,13,155	0/0:13,0:11:18.05:0,18,216	0/0:25,0:24:48.13:0,48,573	0/0:29,0:30:56.97:0,57,657	0/0:30,0:31:60.52:0,61,931	0/0:34,0:34:72.15:0,72,822	0/0:15,0:15:42.13:0,42,513	0/0:22,0:22:45.12:0,45,531	0/0:16,0:16:30.09:0,30,366	0/0:28,0:29:68.38:0,68,808	0/0:27,0:27:43.01:0,43,747	0/0:26,0:26:63.16:0,63,753	0/0:29,0:29:72.21:0,72,868	0/0:23,0:23:60.19:0,60,733	1/1:5,21:26:42.14:682,42,0	1/1:7,12:19:24.06:463,24,0	0/0:19,0:19:54.17:0,54,660	0/0:19,0:19:48.15:0,48,587	0/0:35,0:35:78.03:0,78,929	0/0:18,0:18:45.10:0,45,533	0/0:18,0:19:44.96:0,45,515	0/0:19,0:21:50.53:0,51,556	0/0:19,0:19:39.12:0,39,477	0/0:20,0:20:51.15:0,51,613	0/0:26,0:27:59.62:0,60,665	0/0:12,0:12:27.08:0,27,330
chr10	30065661	.	C	CCCCCCA	3659.69	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-1.736;DP=198;FS=8.635;HRun=0;HaplotypeScore=71.9255;InbreedingCoeff=0.5213;MQ=75.88;MQ0=0;MQRankSum=-4.420;QD=28.82;ReadPosRankSum=-1.849;VQSLOD=2.0561;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,3:7:2.97:20,3,0	1/1:0,1:2:6.02:178,6,0	0/0:14,0:8:9.42:0,9,89	0/0:13,0:10:23.69:0,24,176	1/1:6,0:6:2.80:96,3,0	1/1:4,2:7:6.01:177,6,0	1/1:6,0:6:9.02:181,9,0	1/1:2,0:11:18:176,18,0	1/1:4,1:5:9:144,9,0	1/1:2,0:2:3:39,3,0	1/1:1,3:5:8.96:137,9,0	1/1:3,0:6:8.99:163,9,0	1/1:10,0:11:18.42:318,18,0	1/1:8,0:8:21.04:450,21,0	1/1:4,0:4:2.98:24,3,0	1/1:4,3:7:9.03:230,9,0	0/0:25,0:25:38.25:0,38,591	0/0:19,0:19:22.77:0,23,189	1/1:3,0:3:9.02:114,9,0	1/1:2,0:2:3.01:49,3,0	1/1:2,0:2:3.01:83,3,0	1/1:4,0:4:5.83:130,6,0	1/1:2,0:2:3:62,3,0	1/1:1,1:2:3.01:96,3,0	1/1:8,0:7:11.97:249,12,0	1/1:3,0:7:9:125,9,0	1/1:9,0:9:18.06:371,18,0	1/1:1,0:1:3.01:46,3,0
chr10	30065739	.	AT	A	728.36	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.965;DP=401;FS=39.856;HRun=9;HaplotypeScore=42.3674;InbreedingCoeff=0.9555;MQ=75.79;MQ0=1;MQRankSum=-3.385;QD=19.69;ReadPosRankSum=0.634;VQSLOD=1.4438;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:69.20:0,69,794	0/0:7,0:7:21.06:0,21,242	0/0:20,0:12:8.37:0,8,191	0/0:19,0:17:27.23:0,27,358	0/0:13,0:13:33.10:0,33,379	0/0:17,0:17:48.14:0,48,554	0/0:12,0:12:30.08:0,30,337	0/0:23,0:23:54.15:0,54,615	0/0:13,0:13:33.10:0,33,381	0/0:16,1:17:20.67:0,21,492	0/0:9,0:9:24.07:0,24,275	0/0:11,0:11:33.10:0,33,381	0/0:11,0:11:33.10:0,33,381	0/0:12,0:12:33.10:0,33,381	0/0:20,0:20:54.16:0,54,623	0/0:14,0:14:39.12:0,39,450	1/1:1,21:22:57.03:522,57,0	1/1:3,12:15:36.01:328,36,0	0/0:16,0:16:42.12:0,42,483	0/0:12,0:12:36.11:0,36,415	0/0:11,0:11:33.10:0,33,381	0/0:14,0:14:42.12:0,42,485	0/0:15,0:15:42.12:0,42,485	0/0:10,0:10:30.09:0,30,346	0/0:15,0:15:36.11:0,36,415	0/0:12,0:12:33.09:0,33,371	0/0:10,0:10:30.09:0,30,346	0/0:6,0:6:18.05:0,18,208
chr10	30067304	.	T	TA	1810.96	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-6.185;DP=635;FS=2.784;HRun=1;HaplotypeScore=104.2703;InbreedingCoeff=0.9978;MQ=82.62;MQ0=0;MQRankSum=-1.745;QD=32.93;ReadPosRankSum=0.749;VQSLOD=3.4020;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,114,1460	0/0:12,0:12:36.12:0,36,467	0/0:19,0:19:54.13:0,54,648	0/0:17,0:17:45.11:0,45,553	0/0:11,0:11:30.10:0,30,389	0/0:12,0:12:33.09:0,33,414	0/0:23,0:23:69.19:0,69,866	0/0:34,0:34:90.27:0,90,1122	0/0:22,0:22:66.20:0,66,842	0/0:29,0:29:78.21:0,78,994	0/0:10,0:10:24.06:0,24,298	0/0:44,0:44:99:0,129,1645	0/0:29,0:29:87.27:0,87,1109	0/0:29,0:29:87.27:0,87,1116	0/0:26,0:26:78.25:0,78,1013	0/0:30,0:30:87.28:0,87,1129	1/1:2,27:28:72.24:1079,72,0	1/1:2,24:26:57.19:854,57,0	0/0:17,0:17:48.15:0,48,610	0/0:11,0:11:33.11:0,33,428	0/0:29,0:29:84.23:0,84,1059	0/0:10,0:10:30.10:0,30,389	0/0:16,0:16:48.15:0,48,607	0/0:27,0:27:75.24:0,75,974	0/0:21,0:21:60.19:0,60,779	0/0:25,0:25:75.22:0,75,947	0/0:27,0:27:81.25:0,81,1036	0/0:10,0:10:30.10:0,30,389
chr10	30067418	.	TCC	T	1708.87	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=10.447;DP=763;FS=0.000;HRun=3;HaplotypeScore=94.4388;InbreedingCoeff=0.9703;MQ=81.67;MQ0=0;MQRankSum=-2.396;QD=34.87;ReadPosRankSum=3.745;VQSLOD=3.2736;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,151,2884	0/0:10,0:10:27.09:0,27,522	0/0:20,0:21:53.53:0,54,1147	0/0:24,0:24:58.80:0,59,1130	0/0:24,0:24:72.25:0,72,1382	0/0:27,0:27:78.27:0,78,1500	0/0:24,0:24:72.25:0,72,1384	0/0:36,0:36:99:0,105,2021	0/0:29,0:29:87.30:0,87,1678	0/0:30,0:30:90.25:0,90,1623	0/0:18,0:18:54.17:0,54,1004	0/0:32,0:32:96.32:0,96,1810	0/0:48,0:48:99:0,144,2778	0/0:33,0:33:99:0,99,1889	0/0:24,0:24:72.24:0,72,1360	0/0:35,0:35:99:0,105,2022	1/1:1,30:31:72.67:1076,73,0	1/1:1,17:18:51.13:755,51,0	0/0:20,0:20:60.21:0,60,1142	0/0:27,0:27:78.27:0,78,1498	0/0:26,0:26:75.26:0,75,1423	0/0:23,0:23:66.22:0,66,1237	0/0:20,0:20:60.21:0,60,1158	0/0:21,0:21:63.22:0,63,1217	0/0:45,0:45:99:0,129,2452	0/0:30,0:30:87.30:0,87,1670	0/0:33,0:32:99:0,99,1858	0/0:3,0:3:9.03:0,9,173
chr10	30067524	.	G	GT	22288.73	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-11.551;DP=775;FS=3.326;HRun=6;HaplotypeScore=65.8740;InbreedingCoeff=0.9940;MQ=78.96;MQ0=0;MQRankSum=-3.207;QD=32.63;ReadPosRankSum=3.131;VQSLOD=5.3565;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,39:45:99:1310,105,0	1/1:1,14:15:36.12:453,36,0	0/0:18,0:18:39.07:0,39,393	0/0:19,0:19:13.96:0,14,388	1/1:0,31:31:91.13:1116,91,0	1/1:2,27:29:72.23:906,72,0	1/1:2,18:20:51.16:642,51,0	1/1:3,26:29:78.22:953,78,0	1/1:1,25:27:66.20:818,66,0	1/1:1,26:27:78.25:981,78,0	1/1:4,29:34:90.28:1120,90,0	1/1:5,26:31:78.25:978,78,0	1/1:1,48:49:99:1698,135,0	1/1:1,16:17:45.14:566,45,0	1/1:1,29:29:81.22:1019,81,0	1/1:1,35:36:99:1246,99,0	0/0:30,0:30:87.17:0,87,879	0/0:25,0:25:60.13:0,60,612	1/1:2,13:15:39.12:491,39,0	1/1:1,23:24:66.21:830,66,0	1/1:4,28:33:81.26:1019,81,0	1/1:4,24:28:66.17:813,66,0	1/1:1,23:24:63.20:793,63,0	1/1:4,40:43:99:1341,108,0	1/1:1,27:28:69.22:868,69,0	1/1:3,25:28:72.23:906,72,0	1/1:1,29:30:87.27:1083,87,0	1/1:0,9:9:27.09:340,27,0
chr10	30068389	.	C	CT	8308.08	PASS	AB=0.775;AC=48;AF=0.857;AN=56;BaseQRankSum=-6.597;DP=432;FS=14.703;HRun=9;HaplotypeScore=43.4709;InbreedingCoeff=0.6919;MQ=68.23;MQ0=4;MQRankSum=0.157;QD=23.01;ReadPosRankSum=2.100;VQSLOD=4.1976;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,21:23:51.14:564,51,0	1/1:1,4:6:14.87:147,15,0	0/1:27,0:17:13.21:13,0,122	0/0:28,0:14:17.66:0,18,145	0/1:2,9:11:2.03:195,0,2	1/1:2,16:18:42.11:465,42,0	1/1:1,7:8:15.04:166,15,0	1/1:4,27:32:57.96:815,58,0	1/1:1,5:6:12.03:133,12,0	1/1:1,14:16:45.08:476,45,0	1/1:1,6:7:18.93:201,19,0	1/1:3,12:15:33.09:365,33,0	1/1:3,19:22:57.15:630,57,0	1/1:1,9:10:27.07:298,27,0	1/1:0,11:11:30.08:332,30,0	1/1:0,14:15:35.93:379,36,0	0/0:21,0:22:64.97:0,65,539	0/0:19,0:20:44.02:0,44,370	1/1:5,6:11:21.05:225,21,0	1/1:1,8:9:24.02:250,24,0	1/1:2,14:16:33.09:365,33,0	1/1:4,11:15:11.29:342,11,0	1/1:2,8:10:18.05:199,18,0	1/1:3,14:17:7.04:306,7,0	1/1:0,12:12:33.09:365,33,0	1/1:2,12:14:33.09:365,33,0	1/1:2,15:17:16.20:406,16,0	1/1:3,10:13:7.51:307,8,0
chr10	30069160	.	T	TGGAGCACTGA	62809.02	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-7.780;DP=631;FS=0.000;HRun=0;HaplotypeScore=167.9526;InbreedingCoeff=0.9906;MQ=73.45;MQ0=0;MQRankSum=-14.921;QD=118.51;ReadPosRankSum=2.220;VQSLOD=5.4887;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:16,16:34:66.23:3387,66,0	1/1:3,10:15:33.11:1641,33,0	0/0:19,0:19:51.17:0,51,1493	0/0:22,0:22:53.92:0,54,1430	1/1:4,15:21:35.29:1747,35,0	1/1:9,13:25:66.23:3322,66,0	1/1:13,18:32:81.28:4085,81,0	1/1:9,13:24:66.21:3186,66,0	1/1:9,7:19:48.16:2465,48,0	1/1:7,11:21:48.16:2335,48,0	1/1:5,10:16:36.12:1811,36,0	1/1:9,17:31:78.27:4049,78,0	1/1:9,24:36:95.96:4979,96,0	1/1:6,16:27:69.24:3406,69,0	1/1:7,18:28:72.25:3587,72,0	1/1:5,14:21:51.18:2647,51,0	0/0:25,0:25:72.23:0,72,2231	0/0:35,0:35:99:0,105,3293	1/1:12,12:26:66.19:2926,66,0	1/1:7,14:22:51.18:2592,51,0	1/1:12,6:20:24.08:1148,24,0	1/1:4,12:17:39.13:2014,39,0	1/1:1,10:14:32.94:1673,33,0	1/1:10,6:18:33.05:1548,33,0	1/1:5,11:16:39.07:2001,39,0	1/1:8,12:21:57.20:2759,57,0	1/1:11,11:22:60.21:2865,60,0	1/1:0,4:4:12.04:634,12,0
chr10	30070103	.	C	CT	5217.67	PASS	AB=0.791;AC=43;AF=0.768;AN=56;BaseQRankSum=-4.644;DP=514;FS=7.504;HRun=14;HaplotypeScore=85.4813;InbreedingCoeff=0.2235;MQ=66.39;MQ0=1;MQRankSum=-0.199;QD=11.24;ReadPosRankSum=-3.732;VQSLOD=3.0664;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:14,6:24:8.89:290,9,0	1/1:5,5:11:1.57:127,2,0	0/0:11,0:7:5.74:0,6,38	0/1:9,0:8:2.82:3,0,24	0/1:10,3:13:19.22:81,0,19	0/1:13,5:19:51.96:120,0,52	1/1:15,10:25:29.87:355,30,0	0/1:10,13:25:3.70:304,0,4	1/1:14,7:23:19.34:258,19,0	1/1:14,12:26:12.72:338,13,0	0/1:13,7:20:35.14:209,0,35	1/1:12,3:16:16.47:236,16,0	1/1:14,9:24:1.01:242,1,0	1/1:12,3:15:20.92:168,21,0	1/1:16,5:21:15.32:222,15,0	1/1:9,8:18:7.92:232,8,0	0/0:2,0:20:30.51:0,31,88	0/0:5,0:18:24.39:0,24,70	0/1:16,6:23:37.71:175,0,38	1/1:9,7:16:3.72:134,4,0	1/1:12,4:16:7.52:176,8,0	1/1:11,6:17:19.68:281,20,0	0/1:11,4:16:8.11:89,0,8	1/1:8,12:22:45.93:371,46,0	1/1:5,10:15:29.99:264,30,0	1/1:15,4:21:15.11:207,15,0	1/1:12,3:15:21.41:174,21,0	1/1:8,5:13:4.71:162,5,0
chr10	30070169	.	TTTTG	T	15001.47	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=6.618;DP=493;FS=3.491;HRun=0;HaplotypeScore=96.8503;InbreedingCoeff=0.9938;MQ=73.22;MQ0=0;MQRankSum=-5.174;QD=37.79;ReadPosRankSum=2.154;VQSLOD=4.6536;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,30:34:72.24:1233,72,0	1/1:0,7:7:18.06:277,18,0	0/0:23,0:21:44.84:0,45,925	0/0:14,0:14:33.11:0,33,742	1/1:2,9:11:27.08:424,27,0	1/1:2,16:18:36.12:607,36,0	1/1:2,14:16:36.12:626,36,0	1/1:9,16:25:45.14:721,45,0	1/1:4,10:14:39.13:624,39,0	1/1:4,12:16:30.61:607,31,0	1/1:2,11:13:24.08:417,24,0	1/1:1,16:17:48.16:835,48,0	1/1:4,14:18:42.14:717,42,0	1/1:1,14:15:30.10:503,30,0	1/1:2,19:21:54.15:892,54,0	1/1:4,19:23:54.18:902,54,0	0/0:35,0:35:93.32:0,93,2362	0/0:24,0:24:66.23:0,66,1673	1/1:7,8:15:23.87:406,24,0	1/1:1,16:17:45.15:746,45,0	1/1:2,9:11:24.04:349,24,0	1/1:2,8:10:24.08:380,24,0	1/1:2,11:13:24.08:380,24,0	1/1:3,11:14:33.09:506,33,0	1/1:2,11:13:36.11:600,36,0	1/1:5,18:23:63.19:1019,63,0	1/1:1,19:20:44.89:782,45,0	1/1:2,11:13:27.09:446,27,0
chr10	30072284	.	T	TTAAA	23956.85	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-8.044;DP=475;FS=4.770;HRun=0;HaplotypeScore=63.2749;InbreedingCoeff=0.9335;MQ=63.25;MQ0=2;MQRankSum=-2.447;QD=56.24;ReadPosRankSum=1.211;VQSLOD=5.7742;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,14:16:33.11:845,33,0	1/1:1,7:10:18.06:450,18,0	0/0:6,0:6:15.05:0,15,267	0/0:5,0:5:11.91:0,12,172	1/1:6,25:32:78.26:1830,78,0	1/1:3,9:14:23.80:687,24,0	1/1:3,10:13:33.11:851,33,0	1/1:12,16:33:78.22:1729,78,0	1/1:4,10:16:30.10:779,30,0	1/1:5,23:28:69.18:1642,69,0	1/1:2,10:12:30.10:691,30,0	1/1:3,13:15:33.11:845,33,0	1/1:2,13:16:42.14:1079,42,0	1/1:1,17:18:45.15:1169,45,0	1/1:3,11:13:27.09:682,27,0	1/1:5,12:17:33.11:858,33,0	0/0:20,0:20:54.17:0,54,942	0/0:18,0:18:44.89:0,45,808	1/1:6,12:18:41.93:1000,42,0	1/1:7,23:31:63.22:1555,63,0	1/1:3,7:10:18.06:429,18,0	1/1:1,10:11:33.11:814,33,0	1/1:2,15:17:45.15:1039,45,0	1/1:0,4:4:3.01:78,3,0	1/1:2,20:22:57.19:1386,57,0	1/1:4,21:25:63.22:1573,63,0	1/1:2,20:22:51.07:1324,51,0	1/1:0,9:9:24.08:623,24,0
chr10	30072435	.	AT	A	10791.92	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=5.100;DP=499;FS=0.000;HRun=8;HaplotypeScore=69.5109;InbreedingCoeff=0.9566;MQ=67.70;MQ0=0;MQRankSum=-4.660;QD=24.98;ReadPosRankSum=2.385;VQSLOD=5.5961;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,23:25:63.09:605,63,0	1/1:0,7:7:21.03:203,21,0	0/0:15,0:14:32.89:0,33,366	0/0:11,0:11:15.11:0,15,244	1/1:2,23:25:69.10:663,69,0	1/1:2,22:24:57.09:548,57,0	1/1:2,13:15:42.05:399,42,0	1/1:4,32:36:93.01:866,93,0	1/1:2,11:13:33.05:318,33,0	1/1:3,11:14:39.05:372,39,0	1/1:4,24:28:75.09:715,75,0	1/1:1,8:9:27.04:260,27,0	1/1:2,12:14:39.06:375,39,0	1/1:1,17:18:48.07:462,48,0	1/1:4,18:22:54.08:520,54,0	1/1:3,11:14:39.05:372,39,0	0/0:22,0:22:60.18:0,60,725	0/0:19,0:19:54.08:0,54,621	1/1:5,13:18:42.05:401,42,0	1/1:6,21:27:66.08:630,66,0	1/1:0,19:19:57.09:550,57,0	1/1:1,7:8:24.04:230,24,0	1/1:2,14:16:48.07:461,48,0	1/1:1,5:6:6.01:58,6,0	1/1:3,16:19:51.08:492,51,0	1/1:2,29:31:84.09:799,84,0	1/1:2,14:16:39.06:376,39,0	1/1:4,4:8:12.02:116,12,0
chr10	30072493	.	A	AC	15299.41	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=5.724;DP=559;FS=2.883;HRun=5;HaplotypeScore=102.2602;InbreedingCoeff=0.9982;MQ=83.23;MQ0=0;MQRankSum=-7.202;QD=32.55;ReadPosRankSum=0.624;VQSLOD=4.6718;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,19:25:54.18:710,54,0	1/1:1,9:10:27.09:350,27,0	0/0:19,0:19:31.16:0,31,407	0/0:21,0:21:45.02:0,45,463	1/1:5,28:32:63.20:827,63,0	1/1:6,20:26:63.20:827,63,0	1/1:1,16:17:45.15:592,45,0	1/1:7,31:38:90.28:1167,90,0	1/1:4,6:10:24.08:315,24,0	1/1:3,15:18:51.11:634,51,0	1/1:2,13:15:39.13:512,39,0	1/1:1,19:20:54.16:685,54,0	1/1:4,12:16:39.13:512,39,0	1/1:4,18:22:54.18:709,54,0	1/1:4,17:21:57.14:729,57,0	1/1:5,21:26:69.14:868,69,0	0/0:24,0:24:57.14:0,57,612	0/0:25,0:25:69.17:0,69,740	1/1:4,8:12:30.09:374,30,0	1/1:0,23:23:63.20:829,63,0	1/1:7,16:23:57.11:683,57,0	1/1:1,16:17:48.16:631,48,0	1/1:3,17:20:48.15:616,48,0	1/1:0,12:12:33.11:434,33,0	1/1:5,16:21:54.16:683,54,0	1/1:3,17:20:54.18:709,54,0	1/1:1,15:15:45.15:590,45,0	1/1:0,9:9:24.08:315,24,0
chr10	30072561	.	G	GTTT	14279.16	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=0.111;DP=550;FS=7.386;HRun=11;HaplotypeScore=164.0284;InbreedingCoeff=0.9485;MQ=61.60;MQ0=0;MQRankSum=-7.552;QD=29.87;ReadPosRankSum=-4.551;VQSLOD=1.2216;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:16,7:23:39.08:608,39,0	1/1:2,4:8:20.95:268,21,0	0/0:7,0:7:8.99:0,9,95	0/0:12,0:12:9.23:0,9,106	1/1:15,12:27:56.96:792,57,0	1/1:16,11:29:74.99:1056,75,0	1/1:12,7:25:59.94:713,60,0	1/1:11,11:24:49.12:669,49,0	1/1:2,6:11:26.96:368,27,0	1/1:17,9:28:43.13:656,43,0	1/1:9,4:22:52.07:479,52,0	1/1:8,5:15:26.98:356,27,0	1/1:10,8:20:42.07:643,42,0	1/1:14,8:24:52.28:763,52,0	1/1:12,8:22:48.06:734,48,0	1/1:9,12:23:48.09:789,48,0	0/0:2,0:32:82.31:0,82,497	0/0:5,0:21:49.97:0,50,317	1/1:8,2:11:15.01:211,15,0	1/1:15,4:21:49.29:630,49,0	1/1:7,4:11:15.04:233,15,0	1/1:6,4:11:24:328,24,0	1/1:10,12:25:67.27:960,67,0	1/1:5,3:9:12.47:159,12,0	1/1:9,11:22:46.31:695,46,0	1/1:8,8:17:42.05:704,42,0	1/1:8,16:29:63.09:984,63,0	1/1:15,4:20:38.95:483,39,0
chr10	30072920	.	GA	G	8038.21	PASS	AB=0.780;AC=49;AF=0.875;AN=56;BaseQRankSum=3.704;DP=576;FS=0.000;HRun=12;HaplotypeScore=105.7021;InbreedingCoeff=0.4673;MQ=68.33;MQ0=1;MQRankSum=-0.683;QD=15.58;ReadPosRankSum=2.663;VQSLOD=5.0843;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,25:30:68.71:534,69,0	1/1:0,11:11:23.75:186,24,0	0/1:12,1:9:8.11:8,0,97	0/1:9,2:11:30.17:30,0,65	1/1:7,28:35:67.77:532,68,0	1/1:6,12:18:32.84:255,33,0	1/1:2,15:17:41.83:325,42,0	1/1:9,24:34:44.62:488,45,0	1/1:2,11:13:2.42:202,2,0	1/1:1,21:23:55.80:424,56,0	1/1:3,15:20:39.02:289,39,0	0/1:4,13:17:11.20:241,0,11	1/1:1,19:21:55.83:424,56,0	1/1:5,13:20:44.95:319,45,0	1/1:4,15:19:11.35:271,11,0	1/1:3,12:16:10.43:254,10,0	0/0:8,0:41:88.87:0,89,512	0/0:6,0:19:34.46:0,34,208	1/1:5,12:18:37.87:284,38,0	1/1:5,11:18:4.42:207,4,0	1/1:3,19:22:47.79:371,48,0	1/1:3,9:13:19.92:145,20,0	1/1:7,19:26:23.33:364,23,0	1/1:4,20:24:56.75:440,57,0	1/1:1,16:19:46.86:354,47,0	1/1:3,15:19:46.85:354,47,0	1/1:4,17:20:50.77:395,51,0	1/1:2,16:18:20.35:341,20,0
chr10	30073658	.	CTT	C	8647.55	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-1.901;DP=582;FS=1.240;HRun=14;HaplotypeScore=101.9887;InbreedingCoeff=0.9371;MQ=63.49;MQ0=3;MQRankSum=-0.670;QD=17.06;ReadPosRankSum=5.284;VQSLOD=4.2351;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,19:28:35.66:427,36,0	1/1:2,11:13:23.97:222,24,0	0/0:18,0:14:20.10:0,20,186	0/0:20,0:15:8.87:0,9,215	1/1:7,26:35:71.10:665,71,0	1/1:2,22:27:32.21:367,32,0	1/1:1,12:14:35.76:317,36,0	1/1:11,21:33:56.79:513,57,0	1/1:4,14:18:39:361,39,0	1/1:4,15:19:38.76:345,39,0	1/1:3,10:13:8.19:252,8,0	1/1:4,10:14:23.05:221,23,0	1/1:2,21:23:57.04:527,57,0	1/1:5,13:20:17.16:303,17,0	1/1:0,21:21:50.90:472,51,0	1/1:6,19:25:50.78:458,51,0	0/0:10,0:23:32.58:0,33,305	0/0:7,0:12:12:0,12,119	1/1:4,18:26:53.23:495,53,0	1/1:5,16:21:48.03:444,48,0	1/1:2,7:10:17.80:154,18,0	1/1:2,15:18:38.72:345,39,0	1/1:7,16:23:19.94:193,20,0	1/1:3,10:15:26.61:281,27,0	1/1:8,20:31:36.48:421,36,0	1/1:5,13:20:32.54:333,33,0	1/1:9,19:33:43.10:421,43,0	1/1:0,5:5:12.01:111,12,0
chr10	30075079	.	AGGG	A	19448.35	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=12.288;DP=580;FS=12.061;HRun=4;HaplotypeScore=165.2580;InbreedingCoeff=0.9960;MQ=68.00;MQ0=0;MQRankSum=-9.549;QD=39.05;ReadPosRankSum=2.465;VQSLOD=2.8779;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,26:26:45.08:711,45,0	1/1:0,11:11:30.06:496,30,0	0/0:12,0:12:30.06:0,30,596	0/0:15,0:15:24.12:0,24,793	1/1:0,20:20:42.14:740,42,0	1/1:1,27:28:57.20:1004,57,0	1/1:1,24:25:54.12:915,54,0	1/1:1,18:19:42.14:737,42,0	1/1:0,16:16:48.09:780,48,0	1/1:0,18:18:54.14:916,54,0	1/1:0,11:11:30.10:513,30,0	1/1:2,39:41:99:1674,99,0	1/1:1,22:23:57.02:871,57,0	1/1:2,32:34:84.29:1428,84,0	1/1:0,27:27:60.14:1007,60,0	1/1:0,26:26:69.11:1146,69,0	0/0:38,0:37:99:0,114,2557	0/0:17,0:17:51.16:0,51,1160	1/1:0,16:16:45.11:760,45,0	1/1:0,11:11:33.11:581,33,0	1/1:0,30:30:42.13:724,42,0	1/1:1,22:23:48.08:808,48,0	1/1:0,13:13:24.08:422,24,0	1/1:1,17:18:33.11:566,33,0	1/1:0,20:20:39:672,39,0	1/1:0,19:19:51.15:868,51,0	1/1:0,17:17:45.15:792,45,0	1/1:0,6:6:18.06:317,18,0
chr10	30075399	.	T	TC	19933.06	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-6.291;DP=524;FS=6.565;HRun=1;HaplotypeScore=41.8496;InbreedingCoeff=0.9915;MQ=82.24;MQ0=0;MQRankSum=-8.577;QD=40.19;ReadPosRankSum=4.334;VQSLOD=4.8921;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,34:35:93.32:1394,93,0	1/1:0,9:9:24:331,24,0	0/0:15,0:15:45.15:0,45,584	0/0:13,0:13:32.79:0,33,415	1/1:0,20:20:54.14:781,54,0	1/1:0,23:23:63.21:944,63,0	1/1:1,25:26:60.20:899,60,0	1/1:2,34:35:99:1485,102,0	1/1:1,10:11:30.10:450,30,0	1/1:0,17:17:51.16:744,51,0	1/1:0,17:17:45.15:674,45,0	1/1:0,17:17:48.16:719,48,0	1/1:1,18:19:48.16:719,48,0	1/1:1,10:11:18.06:270,18,0	1/1:1,19:20:57.19:854,57,0	1/1:0,11:11:30.10:450,30,0	1/1:1,40:41:99:1528,102,0	1/1:2,15:17:45.15:669,45,0	1/1:1,21:22:66.22:970,66,0	1/1:0,13:13:39.13:571,39,0	1/1:1,15:16:45.15:674,45,0	1/1:0,9:9:24.08:358,24,0	1/1:0,9:9:27.09:405,27,0	1/1:1,24:25:69.23:1034,69,0	1/1:1,10:11:27.09:404,27,0	1/1:2,24:26:72.24:1077,72,0	1/1:0,26:26:75.25:1124,75,0	1/1:0,9:9:27.09:404,27,0
chr10	30076121	.	T	TGC	7408.94	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-0.657;DP=576;FS=6.916;HRun=0;HaplotypeScore=117.1349;InbreedingCoeff=0.9378;MQ=65.90;MQ0=11;MQRankSum=0.410;QD=15.21;ReadPosRankSum=4.309;VQSLOD=4.3669;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:28:41.46:427,41,0	1/1:8,0:7:19.90:146,20,0	0/0:28,0:22:53.09:0,53,545	0/0:23,0:12:32.97:0,33,316	1/1:15,0:14:31.67:238,32,0	1/1:30,1:31:47.93:345,48,0	1/1:16,0:16:36.43:301,36,0	1/1:36,0:36:86.66:739,87,0	1/1:24,0:24:65.24:477,65,0	1/1:14,0:14:13.65:262,14,0	1/1:9,0:8:10.13:78,10,0	1/1:23,1:24:44.77:424,45,0	1/1:35,0:34:47.18:347,47,0	1/1:17,0:17:20.35:267,20,0	1/1:4,25:30:12.04:193,12,0	1/1:28,0:28:76.97:696,77,0	0/0:19,0:18:46.86:0,47,339	0/0:6,0:19:17.70:0,18,131	1/1:25,0:25:39.32:411,39,0	1/1:13,0:13:19.17:138,19,0	1/1:17,0:17:29.60:307,30,0	1/1:9,0:9:10.93:140,11,0	1/1:8,0:8:8.99:75,9,0	1/1:22,0:21:31.22:237,31,0	1/1:10,0:10:17.93:146,18,0	1/1:16,0:15:35.79:320,36,0	1/1:33,0:33:63.69:451,64,0	1/1:17,0:15:28.52:243,29,0
chr10	30076177	.	CTG	C	3058.64	PASS	AB=1.000;AC=44;AF=0.786;AN=56;BaseQRankSum=5.377;DP=661;FS=1.212;HRun=0;HaplotypeScore=134.1874;InbreedingCoeff=0.2969;MQ=57.30;MQ0=72;MQRankSum=4.758;QD=5.74;ReadPosRankSum=3.810;VQSLOD=3.3161;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:25:47.76:367,48,0	1/1:3,0:2:2.91:23,3,0	0/0:95,0:19:30.71:0,31,295	0/1:128,0:23:23.49:23,0,111	1/1:7,1:8:17.85:149,18,0	1/1:29,0:29:2.60:10,3,0	1/1:17,0:14:32.71:253,33,0	0/1:33,0:33:99:137,0,143	1/1:18,0:18:22.68:228,23,0	0/1:10,0:10:52.08:133,0,52	1/1:11,0:10:14.64:86,15,0	1/1:20,1:20:22.89:304,23,0	0/1:30,0:30:12.34:12,0,24	1/1:18,0:18:5.36:30,5,0	1/1:18,1:19:18.63:209,19,0	1/1:19,1:19:50.52:409,51,0	0/0:14,0:13:25.31:0,25,182	0/0:19,0:19:20.62:0,21,145	0/1:25,0:24:74.93:200,0,75	1/1:14,0:13:11.78:73,12,0	1/1:11,0:9:13.68:123,14,0	1/1:9,0:9:20.96:172,21,0	0/1:7,0:7:0.07:1,0,0	1/1:3,20:22:2.82:24,3,0	1/1:10,0:9:3:25,3,0	1/1:2,6:7:8.66:133,9,0	1/1:27,1:28:5.23:29,5,0	1/1:6,0:5:10.18:68,10,0
chr10	30076178	.	TGTCTCA	T	7397.93	PASS	AB=1.000;AC=45;AF=0.804;AN=56;BaseQRankSum=2.399;DP=649;FS=0.631;HRun=0;HaplotypeScore=137.4959;InbreedingCoeff=0.5771;MQ=57.74;MQ0=68;MQRankSum=1.676;QD=19.12;ReadPosRankSum=3.033;VQSLOD=4.5834;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:25:51.37:713,51,0	1/1:2,0:2:6:73,6,0	0/0:95,0:19:27.50:0,28,600	0/0:127,0:23:3.60:0,4,362	1/1:8,0:8:23.76:320,24,0	1/1:4,25:29:3.95:66,4,0	1/1:15,0:13:33.11:529,33,0	1/1:33,0:33:9.21:510,9,0	1/1:14,3:17:40.51:648,41,0	0/1:10,0:10:55.86:324,0,56	1/1:11,0:10:15.05:176,15,0	1/1:20,0:19:46.83:635,47,0	1/1:2,27:29:3.48:57,3,0	1/1:1,17:18:6.02:118,6,0	1/1:18,0:18:35.99:392,36,0	1/1:20,0:19:52.02:737,52,0	0/0:14,0:13:27.09:0,27,378	0/0:19,0:19:10.10:0,10,261	1/1:24,1:25:52.19:655,52,0	1/1:14,0:13:12.04:148,12,0	1/1:10,0:8:18.05:275,18,0	1/1:9,0:9:22.01:347,22,0	0/0:6,0:6:0.37:0,0,1	1/1:23,0:22:2.84:49,3,0	1/1:2,8:9:3.01:76,3,0	1/1:7,0:7:18.04:270,18,0	1/1:3,24:27:5.75:141,6,0	1/1:5,0:4:9.03:138,9,0
chr10	30076184	.	ACTCTGTCTCT	A	10240.44	PASS	AB=1.000;AC=43;AF=0.768;AN=56;BaseQRankSum=-0.300;DP=636;FS=10.014;HRun=0;HaplotypeScore=148.5858;InbreedingCoeff=0.4839;MQ=63.62;MQ0=65;MQRankSum=1.115;QD=21.65;ReadPosRankSum=3.848;VQSLOD=3.3835;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:24:48.71:983,49,0	1/1:1,0:1:3.01:75,3,0	0/0:99,0:23:55.19:0,55,1186	0/1:136,0:32:6.67:7,0,739	1/1:10,0:10:29.90:515,30,0	1/1:28,0:28:5.28:31,5,0	1/1:18,0:16:45.14:956,45,0	1/1:0,24:24:72.05:1096,72,0	0/1:15,0:15:5.31:607,0,5	0/1:11,0:11:66.02:525,0,66	1/1:0,10:10:15.05:266,15,0	1/1:14,0:15:39.12:803,39,0	1/1:27,0:27:3.01:67,3,0	1/1:18,0:18:5.98:63,6,0	1/1:13,0:13:15.35:480,15,0	1/1:18,0:17:41.99:878,42,0	0/0:15,0:15:39.01:0,39,651	0/0:17,0:17:23.72:0,24,442	1/1:2,22:24:54.05:896,54,0	1/1:4,11:14:18.03:274,18,0	1/1:12,0:10:24.07:461,24,0	1/1:9,0:9:24.54:523,25,0	0/0:0,6:6:0.13:0,0,1	1/1:23,0:22:6.02:123,6,0	1/1:9,0:8:3.01:36,3,0	1/1:5,0:5:15.05:325,15,0	0/0:25,0:25:0.09:0,0,8	1/1:5,0:5:12.04:249,12,0
chr10	30076406	.	ATTTATTTATTTATTTATT	A	807.05	PASS	AB=0.932;AC=14;AF=0.269;AN=52;BaseQRankSum=4.028;DP=210;FS=3.598;HRun=0;HaplotypeScore=129.2873;InbreedingCoeff=-0.1251;MQ=39.72;MQ0=20;MQRankSum=-5.033;QD=5.89;ReadPosRankSum=-1.542;VQSLOD=2.3437;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:6,0:6:7.87:8,0,148	0/0:4,0:4:12.04:0,12,365	./.	0/0:2,0:2:6.02:0,6,103	0/0:11,0:11:9.03:0,9,194	0/1:13,0:13:22.63:23,0,288	0/0:3,0:2:1.25:0,1,55	0/1:36,0:23:48.77:49,0,1225	1/1:4,0:3:7.27:82,7,0	0/1:12,0:9:32.91:33,0,296	0/0:5,0:5:15.05:0,15,281	0/0:3,0:3:9.03:0,9,245	0/0:8,0:7:3.19:0,3,110	0/0:3,0:3:9.03:0,9,154	0/1:5,0:5:77.86:78,0,150	0/0:3,0:3:8.92:0,9,163	0/1:7,12:19:9.28:326,0,9	0/1:7,5:12:11.19:184,0,11	0/0:15,0:15:45.14:0,45,1629	./.	0/0:7,0:6:12.96:0,13,189	0/0:2,0:2:6.02:0,6,187	1/1:4,0:2:2.49:6,2,0	0/0:2,0:2:4.09:0,4,17	0/1:11,0:9:99:114,0,212	0/1:6,0:5:33.05:33,0,176	0/1:9,0:9:14.70:15,0,407	0/0:5,0:5:15.02:0,15,280
chr10	30076414	.	ATTTATT	A	1455.42	PASS	AB=0.907;AC=22;AF=0.500;AN=44;BaseQRankSum=-2.085;DP=202;FS=3.906;HRun=0;HaplotypeScore=82.9539;InbreedingCoeff=-0.0178;MQ=36.33;MQ0=27;MQRankSum=-1.428;QD=9.77;ReadPosRankSum=1.864;VQSLOD=1.7315;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:5,0:5:24.31:42,0,24	0/1:2,0:2:18.94:19,0,39	./.	./.	./.	0/1:7,3:10:81.32:83,0,81	0/0:3,0:2:3:0,3,25	1/1:35,0:20:18.64:274,19,0	0/1:6,0:4:25.70:83,0,26	1/1:11,0:8:17.87:259,18,0	./.	0/0:2,2:4:2.06:0,2,9	0/0:6,0:4:11.98:0,12,99	1/1:1,2:3:3.01:50,3,0	1/1:5,0:5:9.02:130,9,0	0/1:3,1:4:16.11:68,0,16	0/1:21,0:21:8.57:140,0,9	0/1:11,0:11:16.96:112,0,17	0/0:15,0:13:34.92:0,35,469	./.	0/1:8,0:7:20.82:58,0,21	0/1:2,1:2:0:0,0,0	0/0:5,0:2:6:0,6,51	0/0:2,0:2:3.47:0,3,29	1/1:9,0:7:9.03:159,9,0	1/1:7,0:5:6.20:67,6,0	0/1:6,2:9:36.83:54,0,37	./.
chr10	30076418	.	ATTTATTTGTGTGTGTGTGTGTGTG	A	6164.54	PASS	AB=1.000;AC=35;AF=0.833;AN=42;BaseQRankSum=-0.081;DP=202;FS=2.390;HRun=0;HaplotypeScore=114.0906;InbreedingCoeff=0.1720;MQ=36.36;MQ0=27;MQRankSum=-1.432;QD=36.69;ReadPosRankSum=1.324;VQSLOD=3.8197;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:3,3:6:4.33:293,4,0	0/0:1,0:1:0:0,0,0	./.	./.	./.	1/1:9,1:10:18.06:760,18,0	1/1:3,0:2:3.01:138,3,0	1/1:30,0:15:37.95:248,38,0	1/1:4,2:4:12.04:675,12,0	1/1:4,7:8:17.78:400,18,0	./.	1/1:3,0:3:3.01:138,3,0	1/1:6,0:4:12.04:532,12,0	1/1:3,0:3:3.01:50,3,0	1/1:1,3:4:6.02:397,6,0	1/1:4,0:4:9.01:215,9,0	0/1:24,0:24:63.57:64,0,819	0/0:11,0:11:20.56:0,21,1116	0/1:15,0:13:51.11:331,0,51	./.	0/1:9,0:8:0.18:63,0,0	./.	1/1:6,0:3:5.78:275,6,0	1/1:2,0:2:2.83:135,3,0	1/1:2,8:8:9.03:596,9,0	1/1:2,6:6:11.81:370,12,0	1/1:8,0:8:11.37:484,11,0	./.
chr10	30076422	.	ATTTGTGTGTGTGTGTGTGTG	A	5450.75	PASS	AB=1.000;AC=37;AF=0.925;AN=40;BaseQRankSum=3.071;DP=189;FS=2.625;HRun=0;HaplotypeScore=99.0679;InbreedingCoeff=0.3249;MQ=35.77;MQ0=27;MQRankSum=2.381;QD=34.50;ReadPosRankSum=2.323;VQSLOD=3.5628;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:5,0:5:5.31:249,5,0	./.	./.	./.	./.	1/1:10,0:10:16.61:669,17,0	1/1:2,0:1:3.01:138,3,0	1/1:25,0:10:26.02:144,26,0	1/1:6,0:4:12.04:583,12,0	1/1:11,0:8:15.20:228,15,0	./.	1/1:3,0:3:3.01:138,3,0	1/1:6,0:4:12.04:532,12,0	1/1:2,0:2:2.92:17,3,0	1/1:3,0:3:6.02:304,6,0	1/1:3,0:3:5.95:156,6,0	0/1:25,0:25:2.52:3,0,803	0/0:12,0:12:23.57:0,24,1265	1/1:2,13:13:35.96:642,36,0	./.	1/1:9,0:8:1.93:20,2,0	./.	1/1:6,0:3:5.89:275,6,0	1/1:2,0:2:2.97:136,3,0	1/1:10,0:8:9.03:456,9,0	1/1:8,0:6:11.82:324,12,0	1/1:6,0:7:11.82:438,12,0	./.
chr10	30076424	.	TTGTGTGTGTGTG	T	3184.68	PASS	AC=30;AF=0.882;AN=34;BaseQRankSum=4.689;DP=200;FS=1.160;HRun=0;HaplotypeScore=87.7204;InbreedingCoeff=0.4670;MQ=35.13;MQ0=32;MQRankSum=0.743;QD=32.17;ReadPosRankSum=2.865;VQSLOD=2.8218;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,0:6:6.02:175,6,0	./.	./.	./.	./.	1/1:5,2:9:15.05:453,15,0	1/1:1,1:1:3.01:102,3,0	./.	1/1:4,1:4:12.04:391,12,0	1/1:11,0:8:3.01:84,3,0	./.	1/1:2,1:3:3.01:102,3,0	1/1:2,3:4:12.04:390,12,0	./.	1/1:3,0:3:6.02:187,6,0	1/1:2,1:3:3.01:102,3,0	0/0:23,0:28:16.30:0,16,544	0/0:11,0:14:27.96:0,28,978	1/1:15,0:13:11.83:266,12,0	./.	./.	./.	1/1:4,2:3:6.02:204,6,0	1/1:1,1:2:3.01:101,3,0	1/1:12,0:9:9.03:271,9,0	1/1:8,0:6:6.02:183,6,0	1/1:5,2:7:9.03:288,9,0	./.
chr10	30077086	.	G	GTTT	23806.20	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-5.766;DP=596;FS=1.706;HRun=7;HaplotypeScore=80.4469;InbreedingCoeff=0.9964;MQ=83.46;MQ0=0;MQRankSum=-5.977;QD=45.87;ReadPosRankSum=1.892;VQSLOD=4.8742;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,30:36:96.31:1821,96,0	1/1:2,7:9:22.32:432,22,0	0/0:23,0:22:45.12:0,45,612	0/0:18,0:19:35.71:0,36,408	1/1:4,20:25:60.21:1206,60,0	1/1:3,20:23:63.22:1260,63,0	1/1:5,12:17:33.11:661,33,0	1/1:8,28:37:93.31:1873,93,0	1/1:3,16:21:51.15:1008,51,0	1/1:3,18:23:60.16:1142,60,0	1/1:5,10:15:30.10:597,30,0	1/1:0,12:12:36.12:700,36,0	1/1:7,17:25:63.21:1237,63,0	1/1:1,16:17:42.14:848,42,0	1/1:2,23:27:60.21:1243,60,0	1/1:1,15:16:48.16:986,48,0	0/0:20,0:20:57.16:0,57,759	0/0:15,0:15:39.13:0,39,532	1/1:7,14:21:54.13:979,54,0	1/1:2,16:24:60.08:1038,60,0	1/1:2,14:20:45.13:818,45,0	1/1:2,10:12:33.11:640,33,0	1/1:5,11:18:33.07:640,33,0	1/1:4,17:21:42.14:872,42,0	1/1:2,16:23:45.11:826,45,0	1/1:7,23:31:73.80:1472,74,0	1/1:9,21:31:60.18:1170,60,0	1/1:3,8:15:18.04:334,18,0
chr10	30077389	.	ACTGTT	A	27651.87	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=9.630;DP=606;FS=26.334;HRun=0;HaplotypeScore=164.5140;InbreedingCoeff=0.9862;MQ=72.26;MQ0=0;MQRankSum=-12.248;QD=52.37;ReadPosRankSum=2.497;VQSLOD=3.5214;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,37:40:84.29:1729,84,0	1/1:0,6:6:15.05:325,15,0	0/0:20,0:20:53.55:0,54,1379	0/0:18,0:18:36.18:0,36,1304	1/1:2,17:19:38.25:785,38,0	1/1:0,18:18:51.13:1025,51,0	1/1:2,21:23:45.15:951,45,0	1/1:4,15:19:45.15:957,45,0	1/1:0,24:24:60.21:1283,60,0	1/1:0,16:16:48.16:1042,48,0	1/1:0,15:15:33.11:661,33,0	1/1:2,37:39:99:2374,111,0	1/1:3,28:31:75.26:1619,75,0	1/1:1,26:27:75.26:1614,75,0	1/1:2,48:50:99:2713,129,0	1/1:2,26:28:69.24:1490,69,0	0/0:25,0:24:75.26:0,75,2312	0/0:15,0:15:45.15:0,45,1369	1/1:2,12:14:33.09:610,33,0	1/1:1,14:15:39.09:762,39,0	1/1:0,23:23:51.16:1092,51,0	1/1:1,13:14:39.09:777,39,0	1/1:1,9:10:24.04:461,24,0	1/1:1,17:18:42.14:824,42,0	1/1:1,12:13:30.10:628,30,0	1/1:1,29:30:87.28:1827,87,0	1/1:1,31:32:90.22:1842,90,0	1/1:0,4:4:12.04:260,12,0
chr10	30077819	.	TC	T	16724.47	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=14.460;DP=621;FS=2.867;HRun=2;HaplotypeScore=207.0341;InbreedingCoeff=0.9949;MQ=90.72;MQ0=0;MQRankSum=-13.224;QD=33.05;ReadPosRankSum=5.661;VQSLOD=4.0756;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:0,28:28:66.21:856,66,0	1/1:0,10:10:30.10:389,30,0	0/0:28,0:28:78.21:0,78,1098	0/0:39,0:39:99:0,103,1415	1/1:0,13:13:27.09:350,27,0	1/1:0,24:24:66.21:856,66,0	1/1:0,19:19:42.14:544,42,0	1/1:0,21:21:57.16:711,57,0	1/1:0,23:23:60.20:778,60,0	1/1:0,22:22:63.20:817,63,0	1/1:0,6:6:18.06:233,18,0	1/1:0,32:32:87.28:1127,87,0	1/1:0,34:34:90.29:1167,90,0	1/1:0,29:29:84.27:1089,84,0	1/1:0,27:27:66.21:856,66,0	1/1:0,23:23:57.19:739,57,0	0/0:28,0:28:84.28:0,84,1258	0/0:20,0:19:60.20:0,60,887	1/1:0,14:14:36.10:452,36,0	1/1:0,17:17:39.13:506,39,0	1/1:0,23:23:39.05:506,39,0	1/1:0,22:22:60.20:777,60,0	1/1:0,21:21:57.18:739,57,0	1/1:0,21:21:33.11:428,33,0	1/1:0,19:19:51.17:661,51,0	1/1:0,28:28:78.25:1012,78,0	1/1:0,24:24:69.22:895,69,0	1/1:0,6:6:18.06:234,18,0
chr10	30078692	.	CT	C	10468.86	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=6.140;DP=539;FS=4.553;HRun=9;HaplotypeScore=56.0768;InbreedingCoeff=0.9812;MQ=72.44;MQ0=0;MQRankSum=-1.623;QD=22.81;ReadPosRankSum=1.076;VQSLOD=5.7752;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,12:15:33.01:302,33,0	1/1:1,12:13:33.02:302,33,0	0/0:17,0:14:9.43:0,9,244	0/0:9,0:9:21.04:0,21,223	1/1:3,30:33:84.03:769,84,0	1/1:4,11:15:27:247,27,0	1/1:0,9:9:27.01:247,27,0	1/1:6,28:34:84.04:769,84,0	1/1:0,12:12:36.02:330,36,0	1/1:4,23:27:69.03:632,69,0	1/1:2,22:24:34.41:569,34,0	1/1:2,9:11:27.01:247,27,0	1/1:4,18:22:51.02:467,51,0	1/1:1,17:18:45.02:412,45,0	1/1:3,14:17:39.02:357,39,0	1/1:5,12:17:33:302,33,0	0/0:35,1:36:74.85:0,75,1104	0/0:18,0:18:48.11:0,48,540	1/1:5,14:19:41.99:376,42,0	1/1:2,15:17:42.02:384,42,0	1/1:1,8:9:21.01:192,21,0	1/1:3,14:17:39.02:357,39,0	1/1:1,18:19:51.03:467,51,0	1/1:0,10:10:30.02:275,30,0	1/1:4,23:27:63.02:577,63,0	1/1:1,22:23:66.02:600,66,0	1/1:0,35:35:96.05:879,96,0	1/1:0,16:16:45.02:412,45,0
chr10	30078763	.	CGTGTGTGTGTGTGT	C	9548.59	PASS	AB=0.893;AC=42;AF=0.840;AN=50;BaseQRankSum=4.416;DP=407;FS=0.000;HRun=0;HaplotypeScore=164.2581;InbreedingCoeff=0.2735;MQ=51.22;MQ0=14;MQRankSum=-3.894;QD=29.02;ReadPosRankSum=1.103;VQSLOD=3.6536;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:12,0:12:3.01:76,3,0	1/1:2,1:4:6.02:215,6,0	./.	./.	1/1:19,2:21:18.05:471,18,0	1/1:13,4:19:26.96:781,27,0	0/1:9,4:12:17.27:111,0,17	0/1:22,1:22:39.92:40,0,214	1/1:7,3:11:20.74:686,21,0	1/1:16,5:21:17.46:655,17,0	1/1:10,5:15:18.06:635,18,0	1/1:4,9:12:9.31:544,9,0	1/1:6,2:8:6.02:234,6,0	1/1:11,4:16:15.05:526,15,0	1/1:4,11:15:28.04:1056,28,0	1/1:5,5:10:18.06:617,18,0	0/0:23,0:29:42.14:0,42,1549	0/0:11,0:15:33.11:0,33,1569	1/1:8,1:9:6.02:205,6,0	1/1:14,3:18:18.06:596,18,0	1/1:13,1:12:9.03:159,9,0	1/1:5,7:12:11.91:366,12,0	1/1:10,2:12:5.86:234,6,0	0/1:12,0:12:39.88:40,0,49	0/1:14,3:17:42.91:414,0,43	1/1:9,2:11:8.06:240,8,0	1/1:17,4:22:21.07:645,21,0	./.
chr10	30079352	.	G	GA	22707.42	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-11.230;DP=754;FS=6.653;HRun=5;HaplotypeScore=65.6473;InbreedingCoeff=0.9943;MQ=80.95;MQ0=0;MQRankSum=-9.212;QD=34.30;ReadPosRankSum=5.683;VQSLOD=4.6053;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,31:34:90.29:1184,90,0	1/1:1,8:9:21.07:276,21,0	0/0:25,0:25:60.12:0,60,633	0/0:29,0:29:66.15:0,66,703	1/1:1,34:35:99:1303,99,0	1/1:2,29:31:75.24:987,75,0	1/1:0,17:17:51.17:671,51,0	1/1:5,30:35:90.29:1184,90,0	1/1:2,27:29:75.24:987,75,0	1/1:4,28:32:84.27:1105,84,0	1/1:2,24:26:69.18:888,69,0	1/1:0,28:28:78.25:1026,78,0	1/1:2,20:22:60.20:790,60,0	1/1:0,29:29:78.25:1026,78,0	1/1:2,36:38:87.28:1145,87,0	1/1:4,32:36:96.31:1263,96,0	0/0:25,0:25:66.14:0,66,700	0/0:13,0:13:30.07:0,30,323	1/1:2,20:22:57.17:731,57,0	1/1:3,38:41:99:1449,111,0	1/1:1,23:24:60.20:790,60,0	1/1:4,24:28:75.24:975,75,0	1/1:2,21:23:60.20:790,60,0	1/1:2,25:27:69.22:908,69,0	1/1:1,27:27:78.25:1026,78,0	1/1:3,32:35:96.31:1262,96,0	1/1:4,18:21:57.19:749,57,0	1/1:1,10:11:15.05:193,15,0
chr10	30080085	.	CT	C	13327.57	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=6.639;DP=613;FS=2.177;HRun=7;HaplotypeScore=94.0618;InbreedingCoeff=0.9988;MQ=83.80;MQ0=0;MQRankSum=-4.758;QD=25.15;ReadPosRankSum=4.005;VQSLOD=5.1052;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,15:15:36.08:367,36,0	1/1:0,16:16:35.51:367,36,0	0/0:21,0:22:38.25:0,38,567	0/0:15,0:15:33.08:0,33,382	1/1:2,25:27:69.15:702,69,0	1/1:0,29:29:69.16:704,69,0	1/1:1,9:10:24.05:245,24,0	1/1:5,27:32:81.13:805,81,0	1/1:0,15:15:36.08:367,36,0	1/1:1,30:31:87.13:860,87,0	1/1:1,24:25:66.14:667,66,0	1/1:1,26:27:72.16:735,72,0	1/1:3,21:24:57.13:582,57,0	1/1:1,17:18:48.11:490,48,0	1/1:0,26:26:57.13:582,57,0	1/1:1,16:17:45.10:459,45,0	0/0:20,0:20:57.18:0,57,717	0/0:26,0:26:72.19:0,72,883	1/1:5,14:19:42.09:428,42,0	1/1:1,29:30:84.12:834,84,0	1/1:2,16:18:36.08:367,36,0	1/1:3,24:27:69.15:703,69,0	1/1:3,15:18:38.98:398,39,0	1/1:2,12:14:36:353,36,0	1/1:2,26:28:69.15:703,69,0	1/1:2,24:26:72.14:723,72,0	1/1:3,26:29:60.13:612,60,0	1/1:0,9:9:27.06:275,27,0
chr10	30081034	.	CT	C	24258.51	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-5.465;DP=722;FS=0.555;HRun=3;HaplotypeScore=75.4455;InbreedingCoeff=0.9993;MQ=86.45;MQ0=0;MQRankSum=-11.309;QD=36.10;ReadPosRankSum=7.377;VQSLOD=4.3504;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,35:36:87.28:1128,87,0	1/1:0,9:9:27.09:351,27,0	0/0:26,0:26:55.77:0,56,911	0/0:24,0:24:66.11:0,66,919	1/1:0,35:35:99:1282,99,0	1/1:0,32:32:90.29:1169,90,0	1/1:0,19:19:51.16:659,51,0	1/1:2,22:24:60.18:764,60,0	1/1:0,26:26:69.22:896,69,0	1/1:0,32:32:96.28:1217,96,0	1/1:1,18:19:54.18:701,54,0	1/1:0,13:13:36.12:467,36,0	1/1:0,36:36:99:1402,108,0	1/1:0,33:33:99:1285,99,0	1/1:0,34:34:93.30:1208,93,0	1/1:1,30:31:84.27:1091,84,0	1/1:0,23:23:63.20:818,63,0	1/1:0,12:12:36.12:467,36,0	1/1:2,25:27:75.22:945,75,0	1/1:0,32:32:78.25:1008,78,0	1/1:0,26:26:69.22:896,69,0	1/1:0,24:24:66.21:857,66,0	1/1:0,20:20:60.20:779,60,0	1/1:0,22:22:66.21:857,66,0	1/1:1,27:28:75.24:974,75,0	1/1:0,32:32:96.31:1246,96,0	1/1:0,34:34:99:1285,99,0	1/1:0,13:13:39.13:506,39,0
chr10	30083785	.	TTTC	T	15073.15	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-0.469;DP=570;FS=3.383;HRun=0;HaplotypeScore=117.7562;InbreedingCoeff=0.8872;MQ=57.65;MQ0=7;MQRankSum=-0.569;QD=32.56;ReadPosRankSum=0.326;VQSLOD=5.4469;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:21:54.88:609,55,0	1/1:5,0:5:8.59:78,9,0	0/0:24,1:13:21.15:0,21,250	0/0:29,0:8:4.51:0,5,68	1/1:13,16:29:78.34:826,78,0	1/1:19,0:19:49.33:612,49,0	1/1:19,0:19:35.89:472,36,0	1/1:34,0:34:85.04:1023,85,0	1/1:24,0:24:65.85:860,66,0	1/1:13,17:29:71.93:818,72,0	1/1:14,0:14:38.65:398,39,0	1/1:20,0:19:57.09:707,57,0	1/1:16,0:16:48.14:691,48,0	1/1:17,0:17:45.14:640,45,0	1/1:22,1:23:52.46:866,52,0	1/1:27,0:27:76.60:936,77,0	0/0:28,0:28:14.60:0,15,456	0/0:25,0:25:13.59:0,14,480	1/1:12,0:9:24.85:247,25,0	1/1:26,0:25:61.29:901,61,0	1/1:3,0:3:9.03:141,9,0	1/1:24,0:24:66.02:727,66,0	1/1:14,0:14:39.09:523,39,0	1/1:21,0:21:50.22:661,50,0	1/1:19,0:19:50.40:682,50,0	1/1:16,0:16:39.99:539,40,0	1/1:28,0:28:70.05:1020,70,0	1/1:2,0:2:6.02:95,6,0
chr10	30083786	.	TTC	T	13409.25	PASS	AB=1.000;AC=49;AF=0.875;AN=56;BaseQRankSum=1.992;DP=560;FS=3.377;HRun=0;HaplotypeScore=112.0311;InbreedingCoeff=0.6783;MQ=57.99;MQ0=4;MQRankSum=0.276;QD=27.65;ReadPosRankSum=0.339;VQSLOD=5.7318;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:21:56.79:547,57,0	1/1:4,0:4:9.03:126,9,0	0/0:23,0:11:21.27:0,21,244	0/0:27,0:8:11.60:0,12,101	1/1:27,2:29:80.08:741,80,0	1/1:20,1:21:50.78:585,51,0	1/1:17,1:18:35.93:401,36,0	1/1:28,4:32:87.07:928,87,0	1/1:23,0:23:65.95:719,66,0	1/1:29,0:28:74.69:754,75,0	1/1:13,0:13:38.23:362,38,0	1/1:18,2:19:56.82:632,57,0	1/1:16,1:17:51.05:595,51,0	1/1:17,0:17:44.50:478,44,0	1/1:23,1:24:46.51:720,47,0	1/1:24,3:27:78.04:901,78,0	0/1:28,0:28:16.09:16,0,202	0/0:25,0:25:0.46:0,0,232	1/1:9,1:9:26.99:280,27,0	1/1:25,2:26:58.05:810,58,0	1/1:3,0:3:9.03:111,9,0	1/1:23,0:23:65.83:665,66,0	1/1:13,1:14:39.02:449,39,0	1/1:19,1:20:50.39:570,50,0	1/1:18,1:19:54.13:650,54,0	1/1:14,2:16:42.03:487,42,0	1/1:27,1:28:70.33:813,70,0	1/1:2,0:2:6.02:70,6,0
chr10	30083787	.	TC	T	11458.39	PASS	AB=0.963;AC=51;AF=0.911;AN=56;BaseQRankSum=1.325;DP=558;FS=4.287;HRun=1;HaplotypeScore=111.6129;InbreedingCoeff=0.7373;MQ=59.19;MQ0=3;MQRankSum=1.478;QD=22.38;ReadPosRankSum=1.479;VQSLOD=5.0148;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,6:21:56.16:482,56,0	1/1:0,3:3:9.01:92,9,0	0/0:19,1:11:18.82:0,19,186	0/0:25,0:9:14.70:0,15,109	1/1:19,10:29:78.05:610,78,0	1/1:13,8:21:49.74:489,50,0	1/1:13,5:18:37.37:341,37,0	1/1:17,13:30:86.81:750,87,0	1/1:10,12:23:65.54:589,66,0	1/1:19,9:27:73.57:622,74,0	1/1:8,5:13:34.33:287,34,0	1/1:9,11:19:55.86:480,56,0	1/1:6,12:18:50.94:492,51,0	1/1:5,11:16:43.94:402,44,0	1/1:8,16:24:42.45:597,42,0	1/1:17,11:28:72.94:723,73,0	1/1:25,2:27:9.63:187,10,0	0/1:25,1:26:3.02:111,0,3	1/1:9,3:11:32.90:271,33,0	1/1:9,18:26:56.71:669,57,0	1/1:1,3:4:9.49:96,9,0	1/1:15,8:23:65.64:576,66,0	1/1:6,9:15:38.76:356,39,0	1/1:11,9:20:49.81:485,50,0	1/1:6,13:19:54.08:553,54,0	1/1:9,9:18:47.81:453,48,0	1/1:8,19:27:76.73:684,77,0	1/1:0,2:2:6.01:59,6,0
chr10	30083797	.	TTA	T	8863.65	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=6.996;DP=557;FS=4.895;HRun=0;HaplotypeScore=130.6416;InbreedingCoeff=0.9260;MQ=62.43;MQ0=2;MQRankSum=-0.615;QD=18.90;ReadPosRankSum=1.797;VQSLOD=4.6201;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,6:18:43.77:351,44,0	1/1:3,1:4:10.57:102,11,0	0/0:18,0:11:16.78:0,17,306	0/0:18,0:9:11.24:0,11,201	1/1:18,9:27:49.05:392,49,0	1/1:12,8:20:31.92:336,32,0	1/1:14,5:19:37.44:314,37,0	1/1:24,12:36:89.25:680,89,0	1/1:14,11:25:66.14:526,66,0	1/1:16,9:24:24.49:301,24,0	1/1:7,4:11:7.89:171,8,0	1/1:12,10:21:53.75:388,54,0	1/1:10,11:21:19.02:407,19,0	1/1:7,10:17:40.58:398,41,0	1/1:10,14:24:17.37:478,17,0	1/1:14,9:23:52.36:430,52,0	0/0:26,0:26:75.10:0,75,1122	0/0:26,0:26:72.16:0,72,1064	1/1:10,2:12:31.17:211,31,0	1/1:14,16:29:60.84:615,61,0	1/1:2,3:5:11.68:110,12,0	1/1:12,7:19:47.51:349,48,0	1/1:10,8:18:40.54:324,41,0	1/1:13,9:22:43.38:392,43,0	1/1:9,12:21:53.30:518,53,0	1/1:10,9:19:52.59:439,53,0	1/1:11,17:28:57.30:559,57,0	1/1:1,2:3:8.84:69,9,0
chr10	30083798	.	TA	T	8135.93	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=4.950;DP=561;FS=1.586;HRun=5;HaplotypeScore=125.4547;InbreedingCoeff=0.9442;MQ=64.19;MQ0=1;MQRankSum=-1.768;QD=17.24;ReadPosRankSum=2.007;VQSLOD=3.6771;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:19:47.16:345,47,0	1/1:3,1:4:9:79,9,0	0/0:18,0:11:13.01:0,13,201	0/0:19,0:11:19.81:0,20,189	1/1:25,0:26:53.69:339,54,0	1/1:20,0:20:37.97:320,38,0	1/1:19,0:19:35.30:280,35,0	1/1:36,0:36:79.02:601,79,0	1/1:25,1:26:65.96:477,66,0	1/1:26,0:25:40.17:328,40,0	1/1:10,1:11:16.29:148,16,0	1/1:21,0:21:45.45:327,45,0	1/1:20,1:21:16.55:347,17,0	1/1:16,1:17:41.17:341,41,0	1/1:25,0:25:39.89:451,40,0	1/1:20,2:22:44.19:357,44,0	0/0:26,0:26:68.29:0,68,742	0/0:26,0:26:64.46:0,64,693	1/1:12,0:12:29.62:213,30,0	1/1:31,0:30:70.73:579,71,0	1/1:5,0:5:11.86:98,12,0	1/1:18,1:19:43.80:313,44,0	1/1:19,0:19:44.23:330,44,0	1/1:22,0:22:45.76:376,46,0	1/1:21,0:21:56.91:493,57,0	1/1:19,0:19:50.31:396,50,0	1/1:27,1:28:62.25:538,62,0	1/1:3,0:3:8.82:61,9,0
chr10	30084354	.	T	TA	5069.49	PASS	AB=0.735;AC=43;AF=0.768;AN=56;BaseQRankSum=3.990;DP=536;FS=9.684;HRun=0;HaplotypeScore=137.0678;InbreedingCoeff=0.0750;MQ=71.33;MQ0=2;MQRankSum=-0.123;QD=10.45;ReadPosRankSum=7.190;VQSLOD=4.6250;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,9:22:36.13:274,36,0	1/1:2,1:3:8.94:68,9,0	0/0:31,0:21:25.33:0,25,407	0/0:20,0:10:14.99:0,15,133	1/1:16,16:34:5.40:337,5,0	1/1:5,16:22:13.10:219,13,0	1/1:3,5:9:12.87:136,13,0	0/1:16,7:24:10.74:135,0,11	0/1:9,6:17:3.45:121,0,3	1/1:9,19:31:12.39:286,12,0	0/1:8,15:24:8.29:252,0,8	1/1:2,11:13:24.21:236,24,0	1/1:3,17:20:21.38:202,21,0	0/1:11,10:22:12.22:212,0,12	1/1:4,17:21:16.06:259,16,0	1/1:5,16:21:18.36:278,18,0	1/1:24,0:24:6.67:132,7,0	0/1:20,0:20:54.37:57,0,54	0/1:10,2:13:36.58:37,0,55	0/1:10,5:16:2.31:160,0,2	1/1:4,4:9:0.10:92,0,0	0/1:5,7:12:10.66:144,0,11	1/1:3,17:20:20.05:287,20,0	1/1:4,5:9:13.06:151,13,0	1/1:6,10:19:27.11:302,27,0	1/1:4,12:17:22:279,22,0	1/1:17,14:31:4.97:352,5,0	0/1:8,4:12:8.22:61,0,8
chr10	30085935	.	TA	T	6607.08	PASS	AB=1.000;AC=52;AF=0.963;AN=54;BaseQRankSum=-2.189;DP=262;FS=25.542;HRun=6;HaplotypeScore=26.8912;InbreedingCoeff=0.3442;MQ=71.07;MQ0=0;MQRankSum=-2.344;QD=25.22;ReadPosRankSum=1.690;VQSLOD=2.7975;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,16:16:42.11:451,42,0	1/1:1,5:6:15.04:161,15,0	0/1:9,0:7:0.94:1,0,91	0/1:11,0:7:1.68:2,0,168	1/1:1,10:11:30.07:321,30,0	1/1:1,8:9:24.06:258,24,0	1/1:1,0:1:3.01:32,3,0	1/1:3,34:37:99:1044,99,0	1/1:0,5:5:12.03:129,12,0	1/1:0,3:3:9.02:97,9,0	1/1:1,4:5:12.03:129,12,0	1/1:0,7:7:18.05:193,18,0	1/1:0,5:5:12.03:129,12,0	1/1:2,5:7:9.02:97,9,0	1/1:0,7:7:15.04:161,15,0	1/1:0,6:6:12.03:129,12,0	1/1:1,13:14:39.10:419,39,0	1/1:1,17:18:45.11:484,45,0	1/1:2,17:19:51.13:548,51,0	1/1:1,8:9:18.04:193,18,0	1/1:0,9:9:18.05:193,18,0	1/1:2,0:2:5.99:48,6,0	1/1:0,1:1:3.01:32,3,0	./.	1/1:0,11:11:27.07:290,27,0	1/1:0,9:9:27.07:290,27,0	1/1:0,14:14:39.10:419,39,0	1/1:0,11:11:33.08:355,33,0
chr10	30088393	.	A	AACTT	42474.86	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-11.044;DP=654;FS=2.239;HRun=0;HaplotypeScore=82.3916;InbreedingCoeff=0.9973;MQ=78.10;MQ0=0;MQRankSum=-6.533;QD=73.36;ReadPosRankSum=4.164;VQSLOD=7.1754;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,25:27:51.04:1225,51,0	1/1:0,10:11:30.10:867,30,0	0/0:19,0:19:54.65:0,55,1045	0/0:15,0:16:27.04:0,27,415	1/1:0,38:41:99:2793,105,0	1/1:1,22:23:54.19:1563,54,0	1/1:0,16:17:45.02:1102,45,0	1/1:0,20:22:66.17:1709,66,0	1/1:0,22:22:57.20:1646,57,0	1/1:0,27:28:84.26:2292,84,0	1/1:0,18:19:54.19:1521,54,0	1/1:0,24:25:63.22:1820,63,0	1/1:1,29:34:75.26:2168,75,0	1/1:0,28:28:75.26:2167,75,0	1/1:0,23:26:54.19:1564,54,0	1/1:0,33:33:96.33:2775,96,0	0/0:24,0:24:72.25:0,72,1476	0/0:16,0:16:40.94:0,41,835	1/1:0,21:23:69.21:1835,69,0	1/1:1,23:24:69.19:1880,69,0	1/1:0,7:8:21.07:609,21,0	1/1:0,22:25:69.19:1892,69,0	1/1:0,22:24:60.21:1737,60,0	1/1:0,16:18:45.15:1302,45,0	1/1:0,28:29:81.28:2344,81,0	1/1:0,31:33:99:2643,99,0	1/1:0,28:29:84.29:2413,84,0	1/1:0,9:9:21.07:608,21,0
chr10	30089258	.	C	CT	23451.03	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-10.951;DP=666;FS=7.652;HRun=1;HaplotypeScore=55.6486;InbreedingCoeff=0.9989;MQ=76.91;MQ0=0;MQRankSum=-5.669;QD=39.88;ReadPosRankSum=2.659;VQSLOD=5.3394;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,34:34:87.29:1303,87,0	1/1:1,8:9:24.08:360,24,0	0/0:18,0:18:51.15:0,51,635	0/0:13,0:13:29.31:0,29,285	1/1:0,32:32:87.29:1303,87,0	1/1:1,25:26:75.25:1124,75,0	1/1:0,32:32:84.28:1259,84,0	1/1:1,31:32:93.30:1371,93,0	1/1:0,24:24:66.22:989,66,0	1/1:0,18:18:54.17:787,54,0	1/1:1,14:15:39.13:584,39,0	1/1:2,29:31:75.25:1122,75,0	1/1:0,20:20:51.17:764,51,0	1/1:0,23:23:57.19:854,57,0	1/1:2,23:25:57.19:854,57,0	1/1:1,19:20:48.16:719,48,0	0/0:21,0:21:63.19:0,63,804	0/0:26,0:26:78.25:0,78,1011	1/1:2,30:32:90.27:1325,90,0	1/1:0,24:24:66.08:913,66,0	1/1:1,29:30:84.28:1259,84,0	1/1:1,15:16:42.14:630,42,0	1/1:1,26:27:66.22:988,66,0	1/1:0,30:30:84.28:1259,84,0	1/1:0,18:18:45.15:674,45,0	1/1:0,28:28:84.28:1258,84,0	1/1:0,32:32:90.30:1347,90,0	1/1:0,9:9:27.09:405,27,0
chr10	30089889	.	A	ACTGGCTTG	25895.26	PASS	AB=0.842;AC=47;AF=0.839;AN=56;BaseQRankSum=-4.373;DP=752;FS=36.939;HRun=0;HaplotypeScore=198.5988;InbreedingCoeff=0.8266;MQ=77.86;MQ0=0;MQRankSum=-11.493;QD=39.90;ReadPosRankSum=-0.910;VQSLOD=2.9958;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:36,7:43:27.09:1060,27,0	1/1:4,4:8:18.06:568,18,0	0/0:23,0:23:21.05:0,21,505	0/0:27,0:27:42.14:0,42,994	1/1:21,9:30:30.10:1094,30,0	1/1:22,9:32:36.12:1183,36,0	1/1:20,7:30:31.35:1072,31,0	1/1:22,4:29:30.08:805,30,0	1/1:18,12:31:48.16:1890,48,0	1/1:21,7:28:30.10:1234,30,0	1/1:23,3:26:21.07:736,21,0	1/1:16,9:25:33.11:1173,33,0	1/1:19,9:30:33.11:1265,33,0	1/1:16,6:22:15.05:627,15,0	1/1:24,24:49:84.29:3315,84,0	1/1:12,17:29:48.16:2008,48,0	0/0:34,0:34:78.27:0,78,1990	0/0:19,0:19:39.12:0,39,959	0/1:13,2:16:5.94:454,0,6	1/1:20,8:29:30.10:1115,30,0	1/1:36,5:42:17.93:443,18,0	1/1:19,7:27:30.10:1183,30,0	1/1:19,2:21:9.03:306,9,0	1/1:12,11:25:21.07:878,21,0	1/1:12,5:20:19.31:659,19,0	1/1:11,8:20:27.09:1072,27,0	1/1:20,14:34:42.14:1630,42,0	1/1:1,1:2:3.01:125,3,0
chr10	30091520	.	CA	C	10681.78	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-6.046;DP=555;FS=7.744;HRun=8;HaplotypeScore=90.1310;InbreedingCoeff=0.9886;MQ=57.85;MQ0=4;MQRankSum=-0.091;QD=23.07;ReadPosRankSum=3.139;VQSLOD=5.2975;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,16:21:52.64:519,53,0	1/1:3,6:9:26.99:251,27,0	0/0:25,0:14:30.90:0,31,293	0/0:27,0:9:17.61:0,18,167	1/1:5,26:31:69.05:656,69,0	1/1:4,17:21:60.10:579,60,0	1/1:3,15:18:41.09:382,41,0	1/1:0,22:21:63:589,63,0	1/1:3,7:10:21.03:203,21,0	1/1:5,10:15:36.04:342,36,0	1/1:7,18:25:48.06:463,48,0	1/1:6,19:25:60.09:579,60,0	1/1:2,14:16:42.06:405,42,0	1/1:5,14:19:45.06:429,45,0	1/1:2,14:16:39.06:376,39,0	1/1:2,19:21:54.08:520,54,0	0/0:26,0:27:54.90:0,55,706	0/0:12,0:11:18.09:0,18,295	1/1:5,19:21:57.09:550,57,0	1/1:4,20:24:66.10:637,66,0	1/1:5,8:13:23.80:231,24,0	1/1:6,13:19:42.05:400,42,0	1/1:6,13:19:42.06:405,42,0	1/1:5,14:19:42.06:405,42,0	1/1:3,22:25:66.10:637,66,0	1/1:4,19:23:60.10:579,60,0	1/1:5,16:21:42.04:399,42,0	1/1:1,5:5:15.02:145,15,0
chr10	30091564	.	CA	C	10578.44	PASS	AB=0.974;AC=49;AF=0.875;AN=56;BaseQRankSum=-1.894;DP=607;FS=4.186;HRun=7;HaplotypeScore=132.0728;InbreedingCoeff=0.8433;MQ=51.85;MQ0=26;MQRankSum=-6.446;QD=21.68;ReadPosRankSum=2.286;VQSLOD=3.4242;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,17:22:54.05:536,54,0	1/1:1,7:8:24.05:244,24,0	0/0:72,0:13:26.56:0,27,254	0/1:73,1:15:9.14:9,0,97	1/1:9,24:33:78.06:768,78,0	1/1:3,12:15:35.07:364,35,0	1/1:7,7:14:39.03:374,39,0	1/1:12,8:20:44.91:419,45,0	1/1:0,6:6:18.04:183,18,0	1/1:6,14:19:48.09:482,48,0	1/1:1,15:16:45.09:457,45,0	1/1:2,17:19:57.12:578,57,0	1/1:3,11:14:42.09:427,42,0	1/1:5,11:16:39.03:378,39,0	1/1:3,14:17:45.09:456,45,0	1/1:8,11:19:54.08:530,54,0	0/0:33,0:33:77.99:0,78,908	0/0:13,0:13:39.03:0,39,448	1/1:10,10:19:39.07:392,39,0	1/1:7,18:25:75.15:758,75,0	1/1:4,6:9:14.96:150,15,0	1/1:4,12:16:42.08:421,42,0	1/1:5,11:16:36.06:361,36,0	1/1:6,6:12:29.90:282,30,0	1/1:4,25:29:81.16:816,81,0	1/1:4,19:22:60:599,60,0	1/1:2,14:17:47.13:464,47,0	1/1:3,3:5:14.25:129,14,0
chr10	30091594	.	C	CA	13218.30	PASS	AB=0.962;AC=49;AF=0.875;AN=56;BaseQRankSum=-2.889;DP=599;FS=25.237;HRun=7;HaplotypeScore=135.1315;InbreedingCoeff=0.8195;MQ=43.79;MQ0=21;MQRankSum=-7.049;QD=27.25;ReadPosRankSum=-0.716;VQSLOD=2.7425;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,16:21:51.15:610,51,0	1/1:1,7:8:24.06:273,24,0	0/0:65,0:14:23.71:0,24,188	0/1:48,1:9:11.26:21,0,11	1/1:6,24:30:78.24:940,78,0	1/1:7,16:22:60.17:710,60,0	1/1:4,7:10:24.07:284,24,0	1/1:9,16:24:60.17:704,60,0	1/1:1,10:11:33.10:394,33,0	1/1:5,14:20:50.98:570,51,0	1/1:5,18:23:57.17:677,57,0	1/1:6,14:20:48.14:569,48,0	1/1:2,14:16:45.14:539,45,0	1/1:3,10:13:33.10:398,33,0	1/1:3,19:22:63.19:760,63,0	1/1:3,15:18:48.13:565,48,0	0/0:35,0:35:90.09:0,90,860	0/0:13,0:13:35.98:0,36,331	1/1:7,10:17:42:444,42,0	1/1:4,18:22:57.17:688,57,0	1/1:6,6:12:12.03:138,12,0	1/1:2,13:15:42.13:504,42,0	1/1:0,14:14:42.13:507,42,0	1/1:1,5:6:18.05:212,18,0	1/1:4,27:31:87.25:1033,87,0	1/1:6,23:28:75.23:899,75,0	1/1:7,15:22:57.15:672,57,0	1/1:2,3:5:9.03:109,9,0
chr10	30091615	.	CA	C	11640.44	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=0.753;DP=550;FS=23.596;HRun=8;HaplotypeScore=126.6485;InbreedingCoeff=0.8212;MQ=56.39;MQ0=2;MQRankSum=-4.067;QD=23.47;ReadPosRankSum=4.139;VQSLOD=3.4424;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,17:21:51.07:492,51,0	1/1:1,6:7:18.03:174,18,0	0/0:30,1:18:0.02:0,0,223	0/0:23,0:9:14.39:0,14,153	1/1:5,31:36:75.09:718,75,0	1/1:1,22:23:63.10:608,63,0	1/1:0,13:12:33.05:318,33,0	1/1:8,14:21:51.07:488,51,0	1/1:1,13:14:36.05:347,36,0	1/1:2,19:21:57.08:545,57,0	1/1:4,16:20:45.06:433,45,0	1/1:1,15:16:42.07:405,42,0	1/1:0,16:16:48.08:463,48,0	1/1:0,12:12:36.06:347,36,0	1/1:5,17:22:51.07:492,51,0	1/1:2,15:17:45.07:434,45,0	1/1:7,32:39:81.01:782,81,0	1/1:1,14:15:36.06:348,36,0	1/1:7,12:19:36.04:347,36,0	1/1:0,23:23:63.09:607,63,0	1/1:2,12:14:33.05:319,33,0	1/1:0,14:14:39.06:376,39,0	1/1:3,16:19:48.07:463,48,0	1/1:0,7:7:21.03:203,21,0	1/1:8,21:29:60.07:579,60,0	1/1:3,25:28:75.08:716,75,0	1/1:3,19:22:51.08:492,51,0	1/1:0,7:7:15.02:145,15,0
chr10	30093151	.	CT	C	5418.40	PASS	AB=0.718;AC=44;AF=0.786;AN=56;BaseQRankSum=2.621;DP=465;FS=2.708;HRun=13;HaplotypeScore=58.4226;InbreedingCoeff=0.1832;MQ=69.45;MQ0=0;MQRankSum=2.086;QD=12.69;ReadPosRankSum=2.061;VQSLOD=5.1547;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:9,8:17:7.95:145,0,8	1/1:4,5:9:16.95:115,17,0	0/1:12,1:12:13.51:39,0,14	0/1:6,0:5:0.05:0,0,0	1/1:3,17:20:41.63:306,42,0	1/1:6,11:18:5.65:196,6,0	1/1:2,12:15:21.42:226,21,0	1/1:19,17:36:25.51:356,26,0	1/1:8,9:17:20.76:153,21,0	1/1:2,18:20:21.42:315,21,0	1/1:2,14:16:35.73:262,36,0	0/1:9,6:15:27.38:134,0,27	1/1:9,13:22:18.64:296,19,0	0/1:6,7:13:23.07:163,0,23	1/1:5,15:20:41.74:307,42,0	0/1:4,8:12:2.34:148,0,2	0/0:17,0:17:42.04:0,42,398	0/0:18,3:21:4.27:0,4,343	0/1:13,17:30:42.76:315,0,43	1/1:4,17:21:24.64:338,25,0	0/1:2,5:7:8.29:110,0,8	1/1:3,8:11:5.05:172,5,0	1/1:6,18:24:47.17:349,47,0	1/1:3,5:8:11.93:87,12,0	1/1:1,12:13:35.79:263,36,0	1/1:3,11:15:34.82:247,35,0	1/1:7,13:20:33.39:285,33,0	1/1:3,5:8:13.47:91,13,0
chr10	30094816	.	GC	G	1311.45	PASS	AB=0.881;AC=45;AF=0.804;AN=56;BaseQRankSum=0.857;DP=334;FS=15.431;HRun=13;HaplotypeScore=41.3989;InbreedingCoeff=0.3943;MQ=88.19;MQ0=1;MQRankSum=-0.615;QD=4.57;ReadPosRankSum=4.064;VQSLOD=0.2076;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:13,1:16:1.34:1,0,19	1/1:3,3:7:1.80:5,2,0	0/1:17,0:16:30.67:47,0,31	0/0:14,0:15:7.58:0,8,34	1/1:6,2:8:2.94:22,3,0	1/1:2,4:6:5.95:44,6,0	1/1:6,5:15:20.92:127,21,0	1/1:6,3:10:3.40:43,3,0	1/1:4,10:15:19.91:137,20,0	0/1:9,2:12:18.22:39,0,18	0/0:3,1:4:0:0,0,0	1/1:8,3:12:4.97:28,5,0	1/1:9,0:10:7.89:47,8,0	1/1:5,1:7:7.96:50,8,0	1/1:6,8:15:8.73:65,9,0	1/1:9,9:19:19.11:136,19,0	0/0:19,0:18:26.82:0,27,203	0/0:9,0:9:8.86:0,9,60	1/1:2,2:5:5:27,5,0	1/1:3,4:9:10.96:72,11,0	1/1:14,5:23:19.45:110,19,0	1/1:5,0:6:2.02:6,2,0	1/1:4,2:6:5.92:44,6,0	1/1:13,12:27:29.82:193,30,0	1/1:9,1:12:8.11:38,8,0	1/1:5,2:10:10.18:69,10,0	1/1:5,5:13:18.01:105,18,0	1/1:5,0:5:2.01:6,2,0
chr10	30094946	.	TACAC	T	1524.97	PASS	AB=0.856;AC=41;AF=0.932;AN=44;BaseQRankSum=0.931;DP=534;FS=3.334;HRun=0;HaplotypeScore=90.0162;InbreedingCoeff=-0.0892;MQ=68.37;MQ0=11;MQRankSum=-0.129;QD=3.48;ReadPosRankSum=1.017;VQSLOD=1.3236;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:31,1:32:12.76:87,0,13	1/1:4,0:4:3:26,3,0	./.	./.	1/1:15,0:15:3:26,3,0	./.	1/1:15,3:18:6.49:93,6,0	./.	1/1:15,0:18:3:28,3,0	1/1:22,0:23:6.01:67,6,0	1/1:15,0:16:2.80:13,3,0	1/1:18,3:21:3.01:46,3,0	1/1:16,3:19:8.92:138,9,0	1/1:15,4:19:3:46,3,0	0/1:20,5:26:0.42:108,0,0	1/1:23,1:25:6.01:74,6,0	1/1:7,0:12:9.01:84,9,0	./.	1/1:16,0:16:2.51:25,3,0	0/1:18,3:21:2.02:101,0,2	1/1:20,0:20:6.46:53,6,0	1/1:17,0:18:6.01:54,6,0	1/1:13,0:13:0.47:1,0,0	1/1:23,8:32:5.62:218,6,0	1/1:14,5:18:6.02:92,6,0	1/1:24,0:24:4.49:51,4,0	1/1:18,1:22:15.01:181,15,0	./.
chr10	30095375	.	C	CT	19260.70	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-7.694;DP=667;FS=0.483;HRun=6;HaplotypeScore=69.0695;InbreedingCoeff=0.9924;MQ=77.49;MQ0=0;MQRankSum=-1.961;QD=32.76;ReadPosRankSum=2.767;VQSLOD=5.0805;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,23:25:63.20:793,63,0	1/1:1,7:8:21.07:264,21,0	0/0:15,0:15:35.15:0,35,297	0/0:15,0:15:18.59:0,19,215	1/1:5,28:33:81.26:1019,81,0	1/1:4,29:33:81.26:1019,81,0	1/1:2,14:16:42.13:528,42,0	1/1:7,28:35:84.74:1056,85,0	1/1:0,14:14:39.12:491,39,0	1/1:6,24:30:41.62:837,42,0	1/1:1,18:19:51.08:606,51,0	1/1:2,14:16:36.11:452,36,0	1/1:3,27:30:75.24:943,75,0	1/1:0,24:24:69.22:868,69,0	1/1:3,36:39:99:1321,105,0	1/1:1,22:23:66.21:830,66,0	0/0:29,0:29:78.17:0,78,796	0/0:20,0:20:48.10:0,48,489	1/1:4,24:28:69.21:857,69,0	1/1:3,24:27:72.20:889,72,0	1/1:1,18:19:48.15:604,48,0	1/1:0,23:23:63.20:789,63,0	1/1:2,22:24:60.19:755,60,0	1/1:1,22:23:63.20:793,63,0	1/1:3,34:37:99:1245,99,0	1/1:0,22:22:66.21:831,66,0	1/1:0,35:34:99:1283,102,0	1/1:0,5:5:15.05:189,15,0
chr10	30096556	.	CA	C	868.33	PASS	AB=0.909;AC=5;AF=0.089;AN=56;BaseQRankSum=-3.647;DP=735;FS=7.041;HRun=9;HaplotypeScore=111.6599;InbreedingCoeff=0.8324;MQ=80.89;MQ0=1;MQRankSum=-0.858;QD=11.58;ReadPosRankSum=0.932;VQSLOD=2.6251;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:90.21:0,90,1015	0/0:14,0:14:42.12:0,42,485	0/0:31,0:31:52.61:0,53,563	0/0:19,0:18:32.46:0,32,352	0/0:30,0:30:75.22:0,75,866	0/0:23,0:23:63.19:0,63,727	0/0:28,0:28:69.19:0,69,787	0/0:28,1:29:47.75:0,48,803	0/0:30,0:30:81.21:0,81,921	0/0:23,0:23:57.17:0,57,658	0/0:18,0:18:51.11:0,51,574	0/0:27,0:27:60.18:0,60,692	0/0:32,0:32:81.19:0,81,919	0/0:27,1:28:53.68:0,54,826	0/0:31,0:31:81.20:0,81,920	0/0:34,0:34:87.25:0,87,995	1/1:2,23:25:60.02:549,60,0	1/1:4,16:20:48.02:439,48,0	0/0:18,0:18:48.14:0,48,554	0/0:39,0:39:99:0,108,1234	0/0:24,0:24:51.08:0,51,554	0/0:32,0:32:90.25:0,90,1028	0/0:18,0:18:51.15:0,51,589	0/0:31,0:31:75.21:0,75,856	0/1:27,3:30:4.18:4,0,711	0/0:31,0:31:75.22:0,75,865	0/0:22,0:22:57.16:0,57,648	0/0:10,0:10:30.09:0,30,346
chr10	30096612	.	TAGAGAG	T	3479.45	PASS	AB=0.825;AC=41;AF=0.788;AN=52;BaseQRankSum=3.076;DP=565;FS=7.562;HRun=0;HaplotypeScore=162.3751;InbreedingCoeff=0.3947;MQ=66.63;MQ0=6;MQRankSum=-5.684;QD=8.07;ReadPosRankSum=2.094;VQSLOD=1.4432;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:21,7:28:49.07:57,0,49	1/1:8,3:11:3.01:61,3,0	./.	0/0:25,0:16:0.47:0,0,1	0/1:15,5:20:0:0,0,0	1/1:14,1:18:15.03:209,15,0	1/1:16,6:22:11.83:242,12,0	0/0:26,0:26:2.04:0,2,6	1/1:15,0:16:9.03:163,9,0	1/1:13,4:18:3.86:25,4,0	1/1:13,0:16:3.01:42,3,0	1/1:8,1:17:5.45:66,5,0	1/1:9,7:16:12.92:244,13,0	1/1:15,6:22:24.08:446,24,0	1/1:10,1:14:9.03:144,9,0	1/1:10,12:21:15.05:303,15,0	0/0:24,0:28:39.13:0,39,1108	0/0:13,0:18:29.13:0,29,764	1/1:16,2:18:4.25:118,4,0	1/1:31,5:36:3.01:61,3,0	1/1:14,0:14:3.01:57,3,0	./.	1/1:20,2:21:6.02:109,6,0	1/1:15,1:20:11.82:181,12,0	1/1:16,0:21:18.53:252,19,0	0/1:18,3:21:2.05:210,0,2	1/1:17,8:25:21.07:406,21,0	1/1:11,2:12:6.02:84,6,0
chr10	30099356	.	CA	C	672.39	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=-3.675;DP=525;FS=27.237;HRun=14;HaplotypeScore=137.8971;InbreedingCoeff=0.4197;MQ=50.86;MQ0=16;MQRankSum=-0.193;QD=4.61;ReadPosRankSum=3.967;VQSLOD=0.3262;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:31.30:0,31,199	0/1:5,0:5:1.24:1,0,20	1/1:45,0:10:1.49:5,1,0	0/0:36,0:9:9.76:0,10,60	0/0:25,0:25:19.19:0,19,222	0/0:7,0:7:3.51:0,4,81	0/0:19,0:19:13.89:0,14,84	0/0:27,0:25:16.32:0,16,111	0/0:7,0:7:2.96:0,3,20	0/0:21,0:18:27.92:0,28,159	0/0:16,0:16:6.30:0,6,110	0/0:9,0:8:7.31:0,7,78	0/0:23,0:23:1.65:0,2,56	0/0:11,0:11:3.26:0,3,93	0/0:24,0:23:9.09:0,9,70	0/0:9,0:8:0.89:0,1,2	1/1:10,19:28:49.10:356,49,0	1/1:4,24:28:62.13:429,62,0	0/0:18,0:17:19.59:0,20,110	0/0:25,0:24:19.58:0,20,161	0/0:9,0:6:9.73:0,10,61	0/0:15,0:15:2.99:0,3,77	0/0:15,0:14:22.20:0,22,177	0/0:18,0:18:13.21:0,13,73	0/1:10,0:10:0.68:1,0,40	0/1:28,0:25:3.06:3,0,56	0/0:13,0:10:17.34:0,17,122	0/0:4,0:4:0:0,0,0
chr10	30099369	.	AAC	A	2201.80	PASS	AB=0.953;AC=40;AF=0.741;AN=54;BaseQRankSum=-1.469;DP=549;FS=11.382;HRun=0;HaplotypeScore=134.9432;InbreedingCoeff=0.1451;MQ=45.65;MQ0=16;MQRankSum=-5.874;QD=4.85;ReadPosRankSum=-5.157;VQSLOD=-0.0002;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:25:16.83:112,17,0	0/1:3,1:4:2.15:16,0,2	1/1:40,0:6:6.29:19,6,0	0/0:35,0:7:3.89:0,4,71	0/1:24,2:26:51.15:107,0,51	0/1:12,1:13:0.88:63,0,1	1/1:17,0:17:4.61:67,5,0	1/1:23,0:20:2.79:126,3,0	1/1:6,0:6:8.92:35,9,0	1/1:19,0:16:21.09:139,21,0	1/1:15,0:15:5.94:93,6,0	0/1:16,0:15:29.28:33,0,29	1/1:23,0:23:21.63:118,22,0	1/1:16,1:17:16.30:183,16,0	1/1:22,2:23:11.64:98,12,0	1/1:12,0:11:11.21:73,11,0	0/0:33,0:31:56:0,56,272	0/0:27,0:26:57.31:0,57,236	1/1:20,1:20:9.01:157,9,0	0/1:26,0:25:9.98:150,0,10	1/1:9,0:6:0.94:53,1,0	0/1:16,0:16:1.47:97,0,1	0/1:21,0:20:17.93:68,0,18	1/1:17,0:17:19.08:131,19,0	1/1:10,0:10:2.06:46,2,0	1/1:27,0:24:28.94:316,29,0	0/1:26,1:24:10.23:52,0,10	./.
chr10	30099370	.	A	AAC	2027.25	PASS	AB=0.970;AC=43;AF=0.796;AN=54;BaseQRankSum=-2.367;DP=544;FS=1.557;HRun=0;HaplotypeScore=135.1577;InbreedingCoeff=0.2587;MQ=45.78;MQ0=16;MQRankSum=-0.701;QD=4.50;ReadPosRankSum=-5.699;VQSLOD=1.0592;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:25:8.64:108,0,9	1/1:4,0:4:3.33:14,3,0	1/1:39,0:6:5.85:17,6,0	0/0:33,0:6:9.59:0,10,76	0/1:26,0:26:21.93:65,0,22	0/1:13,0:13:4.88:47,0,5	1/1:15,0:16:9.49:90,9,0	1/1:22,0:19:27.75:165,28,0	1/1:6,0:6:2.40:27,2,0	1/1:18,0:15:40.15:219,40,0	0/1:14,1:15:6.02:44,0,6	1/1:14,1:15:9.22:70,9,0	1/1:22,0:23:17.53:100,18,0	1/1:17,1:18:0.35:71,0,0	1/1:21,2:23:4.35:86,4,0	1/1:11,1:11:10.13:57,10,0	0/0:33,0:31:75.38:0,75,582	0/0:27,0:26:71.83:0,72,580	1/1:21,0:20:4.67:166,5,0	1/1:23,2:24:28.10:172,28,0	1/1:8,1:6:7.19:80,7,0	1/1:13,1:16:8.93:102,9,0	0/1:19,2:20:14.29:45,0,14	1/1:17,0:17:9.31:62,9,0	1/1:11,0:11:3.79:21,4,0	1/1:24,1:22:34.16:304,34,0	1/1:29,0:26:10.17:49,10,0	./.
chr10	30099371	.	C	CCAA	4667.74	PASS	AB=1.000;AC=43;AF=0.796;AN=54;BaseQRankSum=0.290;DP=538;FS=27.808;HRun=0;HaplotypeScore=132.8855;InbreedingCoeff=0.4906;MQ=44.54;MQ0=16;MQRankSum=-3.273;QD=11.44;ReadPosRankSum=-2.025;VQSLOD=2.4351;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:22,2:24:13.28:401,13,0	1/1:4,0:4:8.50:64,8,0	0/0:37,0:5:1.57:0,2,51	0/0:32,0:5:11.97:0,12,159	1/1:24,0:24:13.05:205,13,0	1/1:13,0:13:10.91:141,11,0	1/1:17,0:17:29.38:210,29,0	1/1:19,0:18:35.38:371,35,0	1/1:6,0:6:6.56:18,7,0	1/1:16,2:15:40.92:433,41,0	0/1:15,0:15:1.98:106,0,2	1/1:15,0:15:14.59:145,15,0	1/1:22,1:23:24.07:259,24,0	1/1:16,0:16:3.32:188,3,0	1/1:23,1:23:14.88:159,15,0	1/1:12,0:11:3.94:15,4,0	0/0:34,0:32:77.15:0,77,1187	0/0:27,0:26:72.25:0,72,1207	1/1:20,1:20:18.15:369,18,0	1/1:25,0:24:14.85:336,15,0	0/1:9,0:6:11.54:63,0,12	1/1:16,0:16:0.96:169,1,0	0/1:21,0:20:10.43:128,0,10	1/1:16,2:18:20.48:212,20,0	1/1:10,1:11:10.45:126,10,0	1/1:25,1:23:35.91:360,36,0	1/1:27,1:26:12.63:191,13,0	./.
chr10	30099373	.	AAAAC	A	7647.79	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=0.098;DP=540;FS=20.564;HRun=0;HaplotypeScore=122.1564;InbreedingCoeff=0.8127;MQ=43.62;MQ0=17;MQRankSum=-3.714;QD=18.47;ReadPosRankSum=-1.787;VQSLOD=2.9233;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:24:48.72:534,49,0	1/1:5,0:5:7.78:62,8,0	0/0:34,0:4:3.48:0,3,61	0/0:31,0:5:8.86:0,9,150	1/1:23,0:23:41.93:427,42,0	1/1:14,0:14:20.95:252,21,0	1/1:18,0:18:32.96:379,33,0	1/1:22,0:19:38.92:414,39,0	1/1:6,0:6:12.03:145,12,0	1/1:17,1:15:44.77:537,45,0	1/1:15,0:15:38.90:435,39,0	1/1:14,1:15:11.61:103,12,0	1/1:23,0:23:30.88:318,31,0	1/1:15,1:16:7.67:193,8,0	1/1:23,2:24:23.97:303,24,0	1/1:11,1:11:11.73:158,12,0	0/0:34,0:32:85.72:0,86,1517	0/0:27,0:26:72.15:0,72,1493	1/1:20,0:19:40.16:432,40,0	1/1:22,1:22:50.92:598,51,0	1/1:9,1:7:14.50:154,15,0	1/1:15,0:15:29.12:356,29,0	1/1:20,1:20:30.97:392,31,0	1/1:18,0:18:29.42:286,29,0	1/1:13,0:13:12.03:143,12,0	1/1:27,1:24:62.10:772,62,0	1/1:29,0:26:21.14:213,21,0	1/1:1,0:1:3.01:43,3,0
chr10	30099374	.	AAAC	A	9593.26	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-1.855;DP=539;FS=18.594;HRun=0;HaplotypeScore=109.4100;InbreedingCoeff=0.8528;MQ=45.02;MQ0=17;MQRankSum=-3.577;QD=23.28;ReadPosRankSum=-1.051;VQSLOD=3.4082;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,19:24:48.59:704,49,0	1/1:2,3:5:8.86:94,9,0	0/0:33,0:4:5.15:0,5,44	0/0:32,0:6:10.80:0,11,154	1/1:7,16:23:42.02:553,42,0	1/1:10,4:14:21.07:312,21,0	1/1:2,16:18:32.98:498,33,0	1/1:11,9:17:37.89:475,38,0	1/1:0,6:6:12.04:198,12,0	1/1:5,13:15:44.79:632,45,0	1/1:2,13:15:39.06:546,39,0	1/1:14,1:15:11.62:124,12,0	1/1:7,16:23:33.51:463,34,0	1/1:15,0:16:31.40:301,31,0	1/1:8,17:24:24:373,24,0	1/1:3,9:11:11.81:161,12,0	0/0:34,0:32:86.37:0,86,1454	0/0:28,0:27:75.20:0,75,1449	1/1:13,7:19:39.78:578,40,0	1/1:3,20:22:51.13:716,51,0	1/1:10,0:7:15.05:144,15,0	1/1:3,12:15:29.52:403,30,0	1/1:6,15:20:34.64:517,35,0	1/1:10,8:18:29.64:459,30,0	1/1:2,11:13:12.03:172,12,0	1/1:8,19:23:61.68:853,62,0	1/1:28,2:27:24:277,24,0	1/1:1,0:1:3.01:42,3,0
chr10	30099376	.	AC	A	4196.10	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=3.802;DP=534;FS=22.456;HRun=1;HaplotypeScore=116.3690;InbreedingCoeff=0.8260;MQ=46.61;MQ0=16;MQRankSum=-3.531;QD=10.23;ReadPosRankSum=-0.947;VQSLOD=0.1064;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:22:46.92:284,47,0	1/1:5,0:5:8.88:62,9,0	0/0:32,0:4:4.33:0,4,43	0/0:31,1:7:8.14:0,8,90	1/1:19,3:22:40.64:276,41,0	1/1:13,1:14:20.54:124,21,0	1/1:17,0:17:31.89:181,32,0	1/1:21,0:18:37.34:228,37,0	1/1:6,0:6:11.70:68,12,0	1/1:18,0:15:41.88:260,42,0	1/1:13,2:15:36.53:223,37,0	1/1:14,0:14:11.84:83,12,0	1/1:20,3:23:31:197,31,0	1/1:15,1:16:28.60:188,29,0	1/1:23,2:24:16.08:118,16,0	1/1:12,0:11:11.15:60,11,0	0/0:32,0:30:78.58:0,79,945	0/0:28,0:27:78.17:0,78,1007	1/1:20,1:20:44.53:266,45,0	1/1:23,0:22:48.33:277,48,0	1/1:9,0:6:11.76:83,12,0	1/1:15,0:15:29.32:185,29,0	1/1:17,3:19:30.62:199,31,0	1/1:18,0:18:29.56:194,30,0	1/1:12,1:13:9.72:66,10,0	1/1:26,1:23:56.52:405,57,0	1/1:33,0:30:24.07:148,24,0	1/1:1,0:1:2.98:21,3,0
chr10	30099377	.	C	CCAA	7969.98	PASS	AB=0.583;AC=46;AF=0.821;AN=56;BaseQRankSum=-1.873;DP=552;FS=0.475;HRun=0;HaplotypeScore=126.8314;InbreedingCoeff=0.5999;MQ=47.58;MQ0=16;MQRankSum=-4.794;QD=18.71;ReadPosRankSum=0.623;VQSLOD=4.6452;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:24:37.85:488,38,0	1/1:5,0:5:2.56:20,3,0	0/0:33,0:5:6.32:0,6,62	0/0:31,0:8:10.67:0,11,130	1/1:20,3:23:37.44:457,37,0	1/1:5,9:14:19.13:199,19,0	1/1:19,0:19:37.09:456,37,0	1/1:21,0:18:21.31:469,21,0	1/1:7,0:7:14.26:190,14,0	1/1:21,0:18:30.88:609,31,0	1/1:16,0:16:26.23:395,26,0	0/1:4,10:15:5.39:40,0,5	1/1:22,1:23:29.26:374,29,0	1/1:7,10:17:6.46:258,6,0	1/1:23,2:24:15.90:201,16,0	1/1:12,1:12:15.05:242,15,0	0/0:32,0:30:83.72:0,84,1383	0/0:28,0:27:78.17:0,78,1297	1/1:22,0:21:23.34:668,23,0	1/1:23,0:22:43.88:585,44,0	1/1:9,0:6:2.93:197,3,0	1/1:15,1:16:21.19:384,21,0	1/1:20,1:20:27.50:266,28,0	1/1:18,0:18:13.15:340,13,0	1/1:13,0:13:4.31:58,4,0	1/1:27,0:23:32.15:902,32,0	0/1:10,22:30:7.22:109,0,7	1/1:1,0:1:3.01:64,3,0
chr10	30099771	.	TAATAAATAAATA	T	4022.39	PASS	AC=34;AF=0.895;AN=38;BaseQRankSum=-3.998;DP=306;FS=1.132;HRun=0;HaplotypeScore=103.7299;InbreedingCoeff=0.4527;MQ=72.72;MQ0=1;MQRankSum=-4.126;QD=18.28;ReadPosRankSum=-2.952;VQSLOD=1.6201;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:20,7:27:9.03:168,9,0	./.	./.	./.	1/1:15,3:18:6.02:178,6,0	1/1:3,3:6:3.01:103,3,0	./.	1/1:32,7:39:21.05:277,21,0	1/1:3,2:5:3.01:103,3,0	1/1:7,2:9:6.02:206,6,0	1/1:8,1:9:3.01:103,3,0	1/1:8,3:11:6.02:206,6,0	1/1:7,2:9:6.02:206,6,0	1/1:6,5:11:15.05:515,15,0	./.	1/1:8,4:12:9.03:309,9,0	0/0:9,0:18:18.06:0,18,943	0/0:7,0:20:30.10:0,30,1420	./.	1/1:9,2:11:6.02:136,6,0	1/1:5,2:7:3.01:103,3,0	./.	1/1:5,1:6:3.01:88,3,0	./.	1/1:12,4:16:9.03:290,9,0	1/1:3,3:6:9.03:308,9,0	1/1:11,7:18:21.07:722,21,0	./.
chr10	30100015	.	T	TC	26134.41	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-9.932;DP=722;FS=12.339;HRun=2;HaplotypeScore=62.0169;InbreedingCoeff=0.9483;MQ=91.67;MQ0=0;MQRankSum=-11.982;QD=39.42;ReadPosRankSum=6.224;VQSLOD=3.8797;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,49:49:99:2030,141,0	1/1:0,12:12:36.12:518,36,0	0/0:33,0:33:90.28:0,90,1112	0/0:25,0:26:56:0,56,760	1/1:0,20:20:54.14:754,54,0	1/1:2,14:16:45.15:644,45,0	1/1:0,28:28:78.26:1123,78,0	1/1:0,32:32:96.31:1359,96,0	1/1:1,28:29:78.26:1116,78,0	1/1:0,25:25:72.24:1036,72,0	1/1:4,12:16:36.12:517,36,0	1/1:1,27:28:78.26:1123,78,0	1/1:4,27:31:75.25:1077,75,0	1/1:1,28:29:78.26:1118,78,0	1/1:2,26:28:72.24:1035,72,0	1/1:1,35:36:99:1469,102,0	1/1:1,31:32:90.30:1296,90,0	1/1:3,16:19:45.15:646,45,0	1/1:0,26:26:78.22:1062,78,0	1/1:0,18:18:54.18:778,54,0	1/1:0,36:36:99:1426,99,0	1/1:2,13:15:36.12:518,36,0	1/1:2,14:16:42.02:592,42,0	1/1:3,34:37:96.32:1382,96,0	1/1:0,21:21:63.21:907,63,0	1/1:0,36:36:99:1490,108,0	1/1:2,24:24:72.24:1031,72,0	1/1:0,2:2:6.02:86,6,0
chr10	30103053	.	T	TTA	976.99	PASS	AB=0.577;AC=3;AF=0.060;AN=50;BaseQRankSum=-7.497;DP=214;FS=0.910;HRun=0;HaplotypeScore=22.1054;InbreedingCoeff=0.2235;MQ=68.57;MQ0=5;MQRankSum=-0.658;QD=28.73;ReadPosRankSum=4.512;VQSLOD=3.8340;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:4:12.04:0,12,149	./.	./.	0/0:49,0:11:8.70:0,9,92	0/0:8,0:8:24.06:0,24,285	0/0:2,0:3:8.86:0,9,88	0/0:1,0:1:3.01:0,3,38	0/0:35,0:35:78.21:0,78,930	0/0:2,0:2:3.01:0,3,38	0/0:7,0:7:18.05:0,18,215	0/0:3,0:3:9.03:0,9,112	0/0:1,0:1:3.01:0,3,38	0/0:6,0:6:18.04:0,18,212	0/0:5,0:5:15.05:0,15,188	0/0:5,0:5:12.04:0,12,150	0/0:4,0:4:9.03:0,9,113	0/1:4,10:15:47.98:320,0,48	1/1:2,17:19:13.64:755,14,0	0/0:8,0:8:18.06:0,18,225	0/0:4,0:4:9.03:0,9,113	0/0:2,0:2:6.02:0,6,75	0/0:1,0:1:3.01:0,3,37	./.	0/0:1,0:1:3.01:0,3,38	0/0:7,0:7:15.05:0,15,187	0/0:5,0:5:12.04:0,12,149	0/0:2,0:2:3.01:0,3,37	0/0:6,0:6:15.05:0,15,186
chr10	30103473	.	GGGGGGC	G	2355.45	PASS	AB=0.998;AC=33;AF=0.589;AN=56;BaseQRankSum=5.129;DP=492;FS=18.835;HRun=0;HaplotypeScore=118.0521;InbreedingCoeff=-0.3060;MQ=69.61;MQ0=2;MQRankSum=-4.258;QD=5.05;ReadPosRankSum=6.084;VQSLOD=0.4672;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:17,0:17:0.39:105,0,0	0/1:7,0:7:3.73:51,0,4	0/0:14,0:13:21.83:0,22,419	0/0:12,0:12:27.08:0,27,705	1/1:19,0:19:19.79:109,20,0	0/1:19,0:19:38.16:136,0,38	0/1:27,0:27:35.17:35,0,51	0/1:14,0:14:53.49:53,0,62	0/1:14,0:14:18.92:29,0,19	0/1:14,0:14:16.39:64,0,16	0/1:14,0:13:10.88:11,0,19	0/1:20,0:20:27.99:28,0,75	1/1:35,0:35:15.81:42,16,0	0/1:23,0:23:1.41:38,0,1	0/1:28,0:28:20.55:52,0,21	1/1:18,0:18:0.04:22,0,0	1/1:3,16:19:24.02:433,24,0	1/1:4,15:19:27:579,27,0	0/1:15,0:15:19.80:201,0,20	0/1:17,0:17:8.02:110,0,8	0/1:23,1:24:23.46:179,0,23	0/1:11,0:11:28.79:42,0,29	0/1:11,0:10:18.39:18,0,26	0/1:19,0:19:4.54:11,0,5	1/1:24,0:24:18.55:80,19,0	0/1:13,0:13:6.78:39,0,7	0/1:20,0:20:0.44:31,0,0	1/1:5,0:5:4.66:13,5,0
chr10	30103474	.	GGGGGC	G	5275.88	PASS	AB=0.940;AC=50;AF=0.893;AN=56;BaseQRankSum=2.229;DP=482;FS=0.754;HRun=0;HaplotypeScore=100.2517;InbreedingCoeff=0.5687;MQ=69.15;MQ0=2;MQRankSum=-4.696;QD=11.54;ReadPosRankSum=4.607;VQSLOD=3.6931;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:16,1:17:24.67:216,25,0	1/1:6,1:7:16.57:140,17,0	0/0:13,0:13:21.37:0,21,316	0/0:11,0:11:26.91:0,27,553	1/1:19,0:19:31.77:184,32,0	1/1:16,2:18:39.75:356,40,0	1/1:28,0:28:11.63:181,12,0	1/1:16,0:16:3.01:180,3,0	0/1:12,1:13:0.93:114,0,1	1/1:15,0:15:14.75:193,15,0	1/1:13,1:13:13.81:117,14,0	0/1:19,1:20:27.99:126,0,28	1/1:34,1:35:29.49:183,29,0	1/1:22,1:23:26.52:203,27,0	1/1:27,1:28:16.43:255,16,0	1/1:17,0:17:26.58:168,27,0	1/1:16,2:18:24.06:343,24,0	1/1:15,0:15:27.08:345,27,0	1/1:15,0:15:6.82:340,7,0	1/1:15,1:16:31.65:245,32,0	1/1:21,0:21:39.96:319,40,0	1/1:9,1:10:18.66:142,19,0	1/1:10,0:9:17.28:113,17,0	1/1:19,0:19:14.30:92,14,0	1/1:22,2:24:29.57:260,30,0	1/1:12,0:12:20.35:179,20,0	1/1:21,1:22:32.47:227,32,0	1/1:5,0:5:8.85:56,9,0
chr10	30103475	.	GGGGC	G	9658.92	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-2.302;DP=478;FS=2.170;HRun=0;HaplotypeScore=78.1887;InbreedingCoeff=0.9301;MQ=69.26;MQ0=2;MQRankSum=-4.049;QD=21.32;ReadPosRankSum=3.156;VQSLOD=4.2786;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:12,5:17:29.03:308,29,0	1/1:4,3:7:19.28:236,19,0	0/0:13,0:13:19.15:0,19,205	0/0:11,0:11:20.31:0,20,475	1/1:3,16:19:31.83:216,32,0	1/1:11,7:18:47.94:574,48,0	1/1:4,23:27:35.82:538,36,0	1/1:14,2:16:32.80:323,33,0	1/1:2,11:13:15.04:235,15,0	1/1:3,12:15:32.92:405,33,0	1/1:4,10:13:13.98:156,14,0	1/1:5,15:20:17.29:284,17,0	1/1:1,34:35:30.10:503,30,0	1/1:4,19:23:27.08:433,27,0	1/1:3,25:28:39.10:639,39,0	1/1:0,17:17:30.06:475,30,0	1/1:18,0:18:24.05:259,24,0	1/1:15,0:15:27.06:292,27,0	1/1:3,12:15:35.97:601,36,0	1/1:7,7:14:33.49:410,33,0	1/1:16,5:21:48.02:514,48,0	1/1:7,3:10:26.19:287,26,0	1/1:7,3:9:23.99:291,24,0	1/1:2,17:19:17.85:266,18,0	1/1:6,18:24:30.10:467,30,0	1/1:8,3:11:23.66:276,24,0	1/1:2,20:22:33.01:522,33,0	1/1:0,5:5:9.03:152,9,0
chr10	30103476	.	GGGC	G	6366.04	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-0.873;DP=458;FS=7.404;HRun=0;HaplotypeScore=80.4832;InbreedingCoeff=0.9206;MQ=69.91;MQ0=2;MQRankSum=-4.768;QD=14.67;ReadPosRankSum=2.712;VQSLOD=3.4724;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:15,1:16:32.72:259,33,0	1/1:7,0:7:18.89:161,19,0	0/0:12,0:12:12.32:0,12,139	0/0:11,0:11:22.99:0,23,383	1/1:19,0:19:30.27:190,30,0	1/1:17,0:17:47.75:423,48,0	1/1:23,1:24:35.99:337,36,0	1/1:13,0:14:31.07:255,31,0	1/1:13,0:13:15.01:136,15,0	1/1:13,0:13:32.88:266,33,0	1/1:13,0:12:13.91:104,14,0	1/1:18,0:18:17.99:164,18,0	1/1:35,0:35:30.02:271,30,0	1/1:22,0:22:27.01:242,27,0	1/1:27,0:27:39.02:355,39,0	1/1:17,0:17:29.98:266,30,0	1/1:18,0:18:23.99:211,24,0	1/1:15,0:15:26.99:238,27,0	1/1:12,0:12:36:323,36,0	1/1:14,0:14:32.35:264,32,0	1/1:19,1:20:47.36:415,47,0	1/1:9,0:9:26.91:219,27,0	1/1:11,0:10:26.94:224,27,0	1/1:17,1:18:18.02:181,18,0	1/1:24,0:24:30.02:270,30,0	1/1:12,0:12:26.53:229,27,0	1/1:21,0:21:32.70:284,33,0	1/1:5,0:5:9:82,9,0
chr10	30103477	.	GGCGC	G	5316.55	PASS	AB=0.964;AC=50;AF=0.893;AN=56;BaseQRankSum=2.791;DP=452;FS=53.758;HRun=0;HaplotypeScore=89.1145;InbreedingCoeff=0.5263;MQ=70.16;MQ0=2;MQRankSum=-6.159;QD=12.42;ReadPosRankSum=6.826;VQSLOD=1.6145;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:15:16.04:102,16,0	1/1:7,0:7:15.41:149,15,0	0/0:12,1:12:19.18:0,19,216	0/0:11,0:11:18.13:0,18,495	1/1:18,0:18:2.32:32,2,0	1/1:17,0:17:28.24:235,28,0	1/1:24,0:24:33.98:325,34,0	0/1:13,0:13:9.49:69,0,9	1/1:13,0:13:14.03:150,14,0	1/1:13,0:13:20.96:264,21,0	0/1:12,1:12:8.97:105,0,9	1/1:16,0:16:17.96:179,18,0	1/1:35,0:35:30.09:397,30,0	1/1:21,1:22:26.98:338,27,0	1/1:27,0:27:38.99:418,39,0	1/1:17,0:17:27.96:328,28,0	1/1:18,0:18:23.31:140,23,0	1/1:15,0:15:25.42:123,25,0	1/1:12,0:12:35.98:326,36,0	1/1:13,1:14:23.27:250,23,0	1/1:19,0:19:20.45:145,20,0	1/1:9,0:9:6.37:93,6,0	1/1:12,0:11:16.15:128,16,0	1/1:18,0:18:16.84:156,17,0	1/1:23,1:24:29.58:350,30,0	1/1:11,0:11:7.83:112,8,0	1/1:21,0:21:21.91:317,22,0	1/1:5,0:5:9.01:87,9,0
chr10	30103999	.	GA	G	11193.79	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=3.264;DP=624;FS=7.178;HRun=10;HaplotypeScore=64.7996;InbreedingCoeff=0.9811;MQ=73.64;MQ0=1;MQRankSum=-0.006;QD=20.85;ReadPosRankSum=2.627;VQSLOD=5.9306;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,18:21:44.99:391,45,0	1/1:1,7:8:17.99:156,18,0	0/0:21,0:18:32.42:0,32,354	0/0:19,0:16:30.04:0,30,313	1/1:3,25:29:61.99:527,62,0	1/1:2,20:22:50.99:443,51,0	1/1:3,14:17:38.99:339,39,0	1/1:5,23:29:67.67:569,68,0	1/1:3,17:20:14.81:357,15,0	1/1:4,21:25:62.97:547,63,0	1/1:3,24:27:71.97:621,72,0	1/1:3,20:23:53.97:469,54,0	1/1:2,19:21:11.81:331,12,0	1/1:0,13:13:38.99:339,39,0	1/1:2,23:25:65.98:573,66,0	1/1:3,28:31:71.96:625,72,0	0/0:17,0:17:45.12:0,45,498	0/0:30,0:30:84.20:0,84,916	1/1:3,16:19:20.80:406,21,0	1/1:3,27:30:80.98:702,81,0	1/1:0,8:8:24:208,24,0	1/1:3,20:23:50.98:443,51,0	1/1:4,23:27:68.98:598,69,0	1/1:0,9:9:21:182,21,0	1/1:5,31:36:80.97:703,81,0	1/1:2,18:20:53.99:468,54,0	1/1:2,34:36:98.97:859,99,0	1/1:0,18:18:38.99:338,39,0
chr10	30104869	.	GC	G	14598.11	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-9.040;DP=740;FS=0.489;HRun=9;HaplotypeScore=79.6456;InbreedingCoeff=0.9973;MQ=80.30;MQ0=0;MQRankSum=-3.180;QD=22.81;ReadPosRankSum=4.176;VQSLOD=5.4550;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,44:55:99:1098,120,0	1/1:0,10:11:29.05:253,29,0	0/0:27,0:28:41.32:0,41,424	0/0:19,0:18:36.06:0,36,372	1/1:1,29:30:84:760,84,0	1/1:4,15:19:45.02:412,45,0	1/1:2,24:26:60.03:549,60,0	1/1:4,17:21:51:460,51,0	1/1:1,24:25:60.03:549,60,0	1/1:7,26:33:72.02:658,72,0	1/1:2,11:13:30.01:274,30,0	1/1:5,41:46:99:1043,114,0	1/1:1,30:31:81.04:741,81,0	1/1:2,34:36:96.05:879,96,0	1/1:1,45:46:99:1181,129,0	1/1:5,24:29:40.41:624,40,0	0/0:6,0:28:54.45:0,54,315	0/0:6,0:23:49.03:0,49,326	1/1:9,19:28:54.01:494,54,0	1/1:1,16:17:47.95:428,48,0	1/1:1,33:34:86.88:796,87,0	1/1:3,8:11:21.01:192,21,0	1/1:1,23:24:63.02:576,63,0	1/1:3,33:36:93.05:851,93,0	1/1:1,12:13:36.02:329,36,0	1/1:4,20:24:63.02:572,63,0	1/1:0,25:25:75.04:686,75,0	1/1:0,7:7:21.01:192,21,0
chr10	30105668	.	G	GA	26292.91	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-9.073;DP=698;FS=18.285;HRun=1;HaplotypeScore=67.7509;InbreedingCoeff=0.9704;MQ=78.08;MQ0=0;MQRankSum=-10.082;QD=40.14;ReadPosRankSum=5.806;VQSLOD=2.9603;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,51:52:99:2203,147,0	1/1:0,12:12:36.08:515,36,0	0/0:24,0:24:63.04:0,63,759	0/0:19,0:19:28.67:0,29,542	1/1:2,25:27:78.22:1122,78,0	1/1:1,15:16:42.14:622,42,0	1/1:0,30:30:81.27:1214,81,0	1/1:1,27:28:81.25:1168,81,0	1/1:0,19:19:54.18:809,54,0	1/1:0,17:17:51.17:765,51,0	1/1:0,26:26:60.12:849,60,0	1/1:1,24:25:62.84:944,63,0	1/1:0,25:25:69.23:1033,69,0	1/1:0,27:27:72.24:1079,72,0	1/1:0,39:39:99:1618,108,0	1/1:0,30:30:75.25:1124,75,0	1/1:1,22:23:60.20:891,60,0	1/1:1,22:24:66.22:972,66,0	1/1:0,16:16:48.16:714,48,0	1/1:0,20:20:51.17:762,51,0	1/1:2,30:32:84.28:1256,84,0	1/1:0,18:18:48.16:719,48,0	1/1:1,26:27:72.24:1079,72,0	1/1:2,29:31:87.29:1304,87,0	1/1:1,22:23:63.21:944,63,0	1/1:1,28:29:84.28:1238,84,0	1/1:1,32:33:81.03:1213,81,0	1/1:0,6:6:9.03:135,9,0
chr10	30105908	.	G	GA	13274.14	PASS	AB=0.620;AC=45;AF=0.804;AN=56;BaseQRankSum=-4.977;DP=670;FS=2.169;HRun=9;HaplotypeScore=78.2834;InbreedingCoeff=0.6663;MQ=80.31;MQ0=0;MQRankSum=-3.570;QD=22.42;ReadPosRankSum=1.059;VQSLOD=5.7005;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,27:37:36.12:715,36,0	0/1:3,3:6:17.02:57,0,17	0/0:23,0:23:38.11:0,38,279	0/0:16,0:15:25.48:0,25,249	1/1:3,18:24:54.02:549,54,0	1/1:5,16:21:46.51:549,47,0	1/1:8,26:34:60.16:664,60,0	1/1:9,34:43:70.10:973,70,0	1/1:5,29:35:72.03:776,72,0	1/1:3,14:18:42.11:458,42,0	1/1:3,14:18:28.15:283,28,0	1/1:3,16:19:10.05:339,10,0	1/1:4,27:32:45.94:706,46,0	1/1:2,24:26:60.16:664,60,0	1/1:4,31:35:84.23:929,84,0	1/1:9,26:35:49.15:771,49,0	0/0:24,0:24:65.95:0,66,568	0/0:15,0:15:38.97:0,39,334	0/1:6,13:19:6.98:386,0,7	0/1:7,13:21:3.50:354,0,3	1/1:2,34:37:90.07:969,90,0	1/1:3,16:20:45.07:471,45,0	1/1:1,16:18:48.13:531,48,0	1/1:4,22:27:56.20:658,56,0	1/1:0,11:11:27.07:299,27,0	1/1:7,13:21:42.08:445,42,0	1/1:6,27:32:63.17:696,63,0	1/1:1,1:2:3.01:33,3,0
chr10	30106243	.	G	GA	15200.72	PASS	AB=0.558;AC=46;AF=0.821;AN=56;BaseQRankSum=-9.746;DP=564;FS=6.933;HRun=7;HaplotypeScore=49.4595;InbreedingCoeff=0.7742;MQ=81.67;MQ0=0;MQRankSum=-3.578;QD=30.58;ReadPosRankSum=0.693;VQSLOD=5.1316;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,14:15:36.11:435,36,0	0/1:2,6:8:7.91:196,0,8	0/0:18,0:19:20.62:0,21,289	0/0:12,0:12:24.04:0,24,231	1/1:2,33:35:93.29:1123,93,0	1/1:2,26:28:72.21:870,72,0	0/1:3,15:18:6.80:493,0,7	1/1:6,24:30:49.61:829,50,0	1/1:1,13:14:39.12:471,39,0	1/1:5,24:29:20.27:812,20,0	1/1:1,20:21:57.17:689,57,0	1/1:3,15:18:42.13:507,42,0	1/1:3,21:24:66.20:790,66,0	1/1:1,17:18:51.16:615,51,0	1/1:2,14:16:42.13:507,42,0	1/1:1,27:28:78.24:942,78,0	0/0:22,0:22:60.09:0,60,579	0/0:14,0:14:36.05:0,36,348	1/1:4,15:19:45.14:541,45,0	1/1:1,22:23:69.17:811,69,0	1/1:0,9:9:27.08:326,27,0	1/1:2,18:20:51.11:600,51,0	1/1:3,24:27:66.20:796,66,0	1/1:0,9:9:27.08:326,27,0	1/1:3,17:20:45.14:544,45,0	1/1:4,29:33:87.23:1035,87,0	1/1:8,23:30:69.21:834,69,0	1/1:1,3:4:9.03:109,9,0
chr10	30106307	.	TA	T	214.10	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.813;DP=577;FS=6.830;HRun=1;HaplotypeScore=77.9208;InbreedingCoeff=0.9716;MQ=68.26;MQ0=2;MQRankSum=-1.321;QD=10.70;ReadPosRankSum=-1.673;VQSLOD=0.7920;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:55.94:0,56,707	0/0:11,0:11:32.99:0,33,374	0/0:18,0:13:18.51:0,19,235	0/0:12,0:9:18.68:0,19,192	0/0:38,0:38:99:0,114,1307	0/0:38,0:38:99:0,103,1356	0/0:17,0:17:51.17:0,51,660	0/0:33,0:33:96.21:0,96,1121	0/0:6,0:6:18.06:0,18,233	1/1:17,3:20:35.57:309,36,0	0/0:27,0:27:49.99:0,50,871	0/0:19,0:19:57.18:0,57,734	0/0:23,1:24:33.50:0,34,749	0/0:11,0:11:32.95:0,33,380	0/0:21,0:21:55.25:0,55,683	0/0:28,0:28:84.22:0,84,1026	0/0:19,0:19:57.08:0,57,697	0/0:16,0:16:45.05:0,45,528	0/0:18,0:18:52.96:0,53,628	0/0:25,0:25:47.48:0,47,715	0/0:8,0:8:24.05:0,24,281	0/0:13,0:13:39.10:0,39,474	0/0:30,0:30:76.62:0,77,984	0/0:15,0:15:45.10:0,45,547	0/0:24,0:24:65.54:0,66,831	0/0:26,0:26:75.37:0,75,916	0/0:32,0:32:69.22:0,69,1040	0/0:7,0:7:21.07:0,21,271
chr10	30106744	.	AAC	A	1029.01	PASS	AB=0.878;AC=33;AF=0.825;AN=40;BaseQRankSum=1.002;DP=507;FS=0.000;HRun=0;HaplotypeScore=74.5689;InbreedingCoeff=0.0526;MQ=68.83;MQ0=17;MQRankSum=0.165;QD=2.96;ReadPosRankSum=1.129;VQSLOD=1.2066;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:22:9.50:0,10,130	./.	./.	./.	1/1:11,5:16:9.02:95,9,0	1/1:13,3:16:3:32,3,0	0/1:18,2:20:34.74:36,0,35	./.	./.	1/1:14,4:16:8.85:77,9,0	./.	0/1:14,3:17:15.92:54,0,16	1/1:7,2:10:5.85:46,6,0	1/1:17,2:19:8.75:75,9,0	1/1:13,5:18:15.03:158,15,0	1/1:18,4:21:9.02:95,9,0	1/1:14,0:17:2.84:14,3,0	1/1:14,0:17:8.52:42,9,0	./.	1/1:19,0:23:2.84:14,3,0	0/1:28,3:30:51.02:51,0,72	0/1:13,1:14:0:0,0,0	1/1:13,2:18:8.85:77,9,0	1/1:18,4:22:14.40:134,14,0	0/1:14,4:18:8.60:54,0,9	1/1:20,2:20:3:31,3,0	./.	1/1:4,3:7:6.01:62,6,0
chr10	30107287	.	A	AT	17340.52	PASS	AB=0.923;AC=54;AF=0.964;AN=56;BaseQRankSum=-7.146;DP=576;FS=9.142;HRun=5;HaplotypeScore=58.8002;InbreedingCoeff=0.0209;MQ=76.91;MQ0=0;MQRankSum=-5.581;QD=30.11;ReadPosRankSum=4.967;VQSLOD=5.0065;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,29:29:75.24:987,75,0	1/1:2,11:13:27.05:336,27,0	0/1:18,4:19:99:121,0,107	0/1:19,0:16:11.24:11,0,156	1/1:1,25:26:75.20:967,75,0	1/1:2,20:22:57.19:750,57,0	1/1:0,22:22:51.17:671,51,0	1/1:6,19:25:54.14:668,54,0	1/1:1,19:20:51.17:670,51,0	1/1:0,16:16:48.13:602,48,0	1/1:2,24:26:66.13:829,66,0	1/1:1,18:19:42.14:553,42,0	1/1:1,25:26:66.20:868,66,0	1/1:1,26:27:63.20:829,63,0	1/1:1,20:21:57.19:750,57,0	1/1:0,20:20:54.18:710,54,0	1/1:2,16:18:45.15:592,45,0	1/1:1,10:11:27.09:355,27,0	1/1:1,6:7:18.05:225,18,0	1/1:1,14:15:39.13:513,39,0	1/1:0,19:19:48.16:632,48,0	1/1:1,20:21:51.17:671,51,0	1/1:3,31:34:81.69:1046,82,0	1/1:0,12:12:27.09:355,27,0	1/1:3,13:16:33.11:434,33,0	1/1:2,27:28:81.25:1050,81,0	1/1:1,37:38:81.24:1066,81,0	1/1:0,3:3:6.02:79,6,0
chr10	30113138	.	AAAAC	A	21188.20	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-1.022;DP=727;FS=5.523;HRun=0;HaplotypeScore=130.2245;InbreedingCoeff=0.9141;MQ=68.31;MQ0=4;MQRankSum=-3.466;QD=31.44;ReadPosRankSum=5.527;VQSLOD=4.5936;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,44:57:99:1711,105,0	1/1:4,14:19:42:611,42,0	0/0:25,0:23:25.72:0,26,685	0/0:28,0:25:29.28:0,29,735	1/1:5,24:29:60.01:873,60,0	1/1:1,26:27:69.17:1101,69,0	1/1:10,19:29:45.15:746,45,0	1/1:12,17:29:51.06:748,51,0	1/1:4,20:24:48.16:796,48,0	1/1:7,18:25:51.15:798,51,0	1/1:5,12:17:24:365,24,0	1/1:6,22:27:51.11:814,51,0	1/1:3,16:19:27.06:448,27,0	1/1:8,28:36:57.13:913,57,0	1/1:4,26:30:66.23:1094,66,0	1/1:7,21:27:57.16:916,57,0	1/1:11,28:39:81.28:1343,81,0	1/1:8,17:25:48.16:796,48,0	1/1:4,14:17:39.10:592,39,0	1/1:8,24:32:63.18:1015,63,0	1/1:5,21:26:54.04:864,54,0	1/1:5,20:25:48.08:763,48,0	1/1:2,17:19:41.65:695,42,0	1/1:2,23:25:63.22:1045,63,0	1/1:8,17:25:39.13:647,39,0	1/1:6,13:19:39.11:598,39,0	1/1:3,18:21:51.17:846,51,0	1/1:2,1:3:3.01:50,3,0
chr10	30115715	.	CCT	C	66.72	PASS	AB=0.911;AC=8;AF=0.154;AN=52;BaseQRankSum=6.441;DP=234;FS=0.000;HRun=0;HaplotypeScore=93.0285;InbreedingCoeff=-0.2368;MQ=40.91;MQ0=5;MQRankSum=-5.003;QD=1.03;ReadPosRankSum=-1.011;VQSLOD=1.5883;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:36.12:0,36,668	./.	0/0:23,0:4:6.02:0,6,118	0/0:27,0:7:7.90:0,8,109	0/1:6,1:7:10.80:11,0,151	0/0:8,1:9:1.53:0,2,398	0/0:16,2:18:31.21:0,31,874	0/0:5,0:4:12:0,12,202	0/0:6,0:6:7.87:0,8,222	0/1:8,1:9:21.71:22,0,441	0/0:5,1:6:2.06:0,2,234	0/1:9,0:9:31.19:31,0,382	0/0:6,0:6:15.05:0,15,303	0/0:14,1:15:25.74:0,26,619	0/1:6,3:9:71.22:71,0,334	0/1:9,0:9:5.33:5,0,282	0/0:8,0:8:21.03:0,21,364	0/0:4,0:4:8.99:0,9,140	0/0:4,0:4:12.04:0,12,240	0/0:5,1:6:2.37:0,2,227	0/0:4,0:4:6:0,6,85	0/1:6,1:7:5.19:5,0,110	0/0:6,0:6:18.06:0,18,342	0/0:6,0:6:6.02:0,6,102	0/1:7,0:7:13.18:13,0,194	0/1:7,1:8:29.10:29,0,323	0/0:2,0:2:5.61:0,6,70	./.
chr10	30115771	.	TC	T	10435.28	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=8.088;DP=502;FS=21.324;HRun=6;HaplotypeScore=138.5466;InbreedingCoeff=0.8794;MQ=74.88;MQ0=4;MQRankSum=-3.658;QD=27.32;ReadPosRankSum=4.437;VQSLOD=3.0851;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,22:23:62.95:656,63,0	1/1:0,7:7:21.05:226,21,0	0/0:38,0:25:57.34:0,57,688	0/0:35,0:20:1.27:0,1,274	1/1:2,11:13:27.22:317,27,0	1/1:2,5:7:15.03:155,15,0	1/1:1,21:22:63.16:676,63,0	1/1:2,10:12:27.06:290,27,0	1/1:1,13:14:36.08:380,36,0	1/1:1,23:24:69.17:741,69,0	1/1:0,14:15:42.11:451,42,0	1/1:0,18:18:51.13:547,51,0	1/1:3,15:18:48.11:511,48,0	1/1:7,21:28:69.15:728,69,0	1/1:5,19:24:69.14:724,69,0	1/1:5,22:27:62.84:676,63,0	0/0:28,0:28:81.24:0,81,1048	0/0:19,0:19:51.13:0,51,648	1/1:3,4:7:18.04:193,18,0	1/1:2,11:13:31.84:353,32,0	1/1:3,17:20:36.03:373,36,0	1/1:4,14:18:41.78:450,42,0	1/1:2,11:13:27.07:290,27,0	1/1:1,16:17:42.10:451,42,0	1/1:2,11:13:32.43:354,32,0	1/1:0,18:18:54.13:573,54,0	1/1:1,9:10:27.07:290,27,0	1/1:0,1:1:3.01:32,3,0
chr10	30116422	.	TACACACACACACAC	T	6212.78	PASS	AB=0.839;AC=43;AF=0.827;AN=52;BaseQRankSum=5.286;DP=558;FS=3.634;HRun=0;HaplotypeScore=205.7762;InbreedingCoeff=0.1772;MQ=67.81;MQ0=13;MQRankSum=-2.476;QD=13.65;ReadPosRankSum=1.909;VQSLOD=3.9522;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:37,0:35:12.01:181,12,0	1/1:5,3:8:9.03:350,9,0	./.	./.	0/1:18,7:24:9.54:122,0,10	1/1:10,3:13:9.03:287,9,0	0/1:16,2:18:28.67:224,0,29	1/1:22,0:22:2.94:55,3,0	1/1:13,3:16:6.02:233,6,0	0/1:9,3:11:0.80:147,0,1	1/1:8,4:11:2.93:55,3,0	1/1:14,1:15:5.97:118,6,0	0/1:16,5:22:50.62:543,0,51	1/1:14,4:18:6.49:225,6,0	1/1:16,6:22:21.07:796,21,0	1/1:21,6:28:11.38:446,11,0	0/0:19,0:23:33.11:0,33,1303	0/0:20,0:21:25.44:0,25,1187	1/1:11,0:11:0.47:1,0,0	1/1:12,6:18:12.04:346,12,0	1/1:26,0:26:2.95:48,3,0	1/1:10,8:20:12.04:428,12,0	1/1:9,6:14:12.04:466,12,0	0/1:23,2:24:14.19:111,0,14	1/1:12,4:15:6.02:214,6,0	1/1:16,0:16:2.99:26,3,0	1/1:8,8:17:17.64:674,18,0	1/1:15,4:18:3.01:117,3,0
chr10	30116846	.	A	ATT	21711.67	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-9.047;DP=703;FS=1.080;HRun=9;HaplotypeScore=77.1665;InbreedingCoeff=0.9987;MQ=76.71;MQ0=2;MQRankSum=-4.054;QD=34.46;ReadPosRankSum=1.521;VQSLOD=5.0491;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,43:45:99:1663,108,0	1/1:1,13:14:35.44:553,35,0	0/0:17,0:17:30.82:0,31,314	0/0:13,0:14:26.95:0,27,261	1/1:2,33:37:95.57:1269,96,0	1/1:3,18:23:50.65:729,51,0	1/1:0,18:19:45.15:693,45,0	1/1:7,35:42:99:1402,99,0	1/1:3,16:19:41.63:607,42,0	1/1:4,16:21:50.64:721,51,0	1/1:5,17:24:58.04:759,58,0	1/1:0,28:30:80.25:1172,80,0	1/1:6,28:35:62.70:932,63,0	1/1:1,18:19:39.13:600,39,0	1/1:3,24:26:69.71:1062,70,0	1/1:5,31:38:99:1498,103,0	0/0:28,0:28:47.52:0,48,676	0/0:14,0:14:39.08:0,39,414	1/1:4,25:30:77.70:1091,78,0	1/1:3,21:25:59.65:847,60,0	1/1:2,13:15:36.12:554,36,0	1/1:2,21:25:60.16:876,60,0	1/1:4,29:34:68.08:1043,68,0	1/1:2,12:14:30.10:462,30,0	1/1:0,17:19:45.15:675,45,0	1/1:3,28:32:86.74:1262,87,0	1/1:5,23:29:62.03:870,62,0	1/1:4,8:12:24.08:370,24,0
chr10	30118791	.	TTGCTGCTGCTGCTGCTGC	T	4719.41	PASS	AC=22;AF=0.688;AN=32;BaseQRankSum=3.293;DP=587;FS=7.194;HRun=0;HaplotypeScore=246.2090;InbreedingCoeff=0.5272;MQ=67.79;MQ0=6;MQRankSum=-0.390;QD=17.68;ReadPosRankSum=4.291;VQSLOD=2.7106;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:28,0:24:5.75:0,6,45	0/0:21,0:17:6.01:0,6,73	./.	./.	1/1:25,0:25:6.02:163,6,0	0/0:17,0:17:1.55:0,2,4	1/1:8,3:11:6.02:238,6,0	0/0:23,0:23:1.25:0,1,3	./.	1/1:13,4:16:3.01:145,3,0	1/1:17,15:32:18.06:869,18,0	1/1:20,21:42:15.05:705,15,0	1/1:14,14:28:15.05:712,15,0	1/1:7,9:17:12.04:560,12,0	1/1:14,0:30:9.03:316,9,0	./.	./.	./.	./.	./.	./.	1/1:23,13:36:2.74:144,3,0	./.	0/0:25,0:25:2.13:0,2,5	1/1:15,10:25:14.89:724,15,0	1/1:1,3:3:3.01:145,3,0
chr10	30119619	.	AT	A	6427.26	PASS	AB=0.758;AC=52;AF=0.929;AN=56;BaseQRankSum=-3.712;DP=578;FS=2.664;HRun=13;HaplotypeScore=63.1584;InbreedingCoeff=0.4053;MQ=79.37;MQ0=4;MQRankSum=-2.581;QD=12.13;ReadPosRankSum=4.976;VQSLOD=4.9041;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:8,21:29:0.49:277,0,0	1/1:0,7:7:14.91:109,15,0	0/0:47,0:27:9.88:0,10,178	0/1:27,1:22:5.25:5,0,121	1/1:3,24:28:41.43:456,41,0	1/1:5,17:22:35.74:262,36,0	1/1:4,9:13:0.56:162,1,0	1/1:5,20:24:50.57:367,51,0	1/1:3,10:14:22.90:159,23,0	1/1:9,19:29:43.64:309,44,0	1/1:5,9:15:25.79:177,26,0	1/1:3,17:20:38.52:275,39,0	1/1:6,17:22:27.78:251,28,0	1/1:3,8:12:19.89:137,20,0	1/1:5,17:22:29.09:310,29,0	1/1:2,14:17:28.68:202,29,0	1/1:4,17:21:41.72:306,42,0	1/1:2,14:17:37.82:268,38,0	1/1:5,16:21:44.48:311,44,0	1/1:7,24:33:47.04:444,47,0	1/1:0,11:12:22.92:159,23,0	1/1:3,12:15:35.76:261,36,0	1/1:6,12:19:31.73:225,32,0	1/1:1,12:13:20.88:153,21,0	1/1:6,11:17:18.83:168,19,0	1/1:7,15:22:44.43:317,44,0	1/1:8,24:32:1.33:336,1,0	1/1:1,2:3:2.98:22,3,0
chr10	30120491	.	G	GCAA	1685.75	PASS	AB=0.983;AC=6;AF=0.107;AN=56;BaseQRankSum=-4.935;DP=796;FS=2.956;HRun=0;HaplotypeScore=109.3594;InbreedingCoeff=0.6736;MQ=62.56;MQ0=6;MQRankSum=1.114;QD=16.86;ReadPosRankSum=-2.449;VQSLOD=3.2479;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:38:80.01:0,80,1048	0/0:12,0:12:21.04:0,21,272	0/0:19,0:7:5.99:0,6,64	0/1:15,0:15:2.86:3,0,174	0/0:33,0:34:75.18:0,75,988	0/0:32,0:32:69.23:0,69,953	0/0:27,0:28:27.70:0,28,623	0/0:41,0:41:63.15:0,63,813	0/0:24,0:24:41.41:0,41,697	0/0:24,0:24:54.16:0,54,723	0/0:17,0:17:36.11:0,36,481	0/0:34,0:34:69.22:0,69,943	0/0:39,0:39:96.29:0,96,1302	0/0:39,0:40:99:0,102,1386	0/0:33,0:34:87.23:0,87,1174	0/0:35,0:35:84.24:0,84,1118	0/0:27,0:28:72.19:0,72,962	0/0:18,0:18:45.10:0,45,607	1/1:8,12:20:33.10:623,33,0	1/1:10,25:35:69.48:1181,69,0	0/0:28,0:30:84.20:0,84,1106	0/1:28,1:29:5.75:6,0,630	0/0:33,0:33:75.25:0,75,1043	0/0:28,0:29:75.17:0,75,970	0/0:27,0:29:63.13:0,63,819	0/0:33,0:33:81.26:0,81,1115	0/0:31,0:32:73.69:0,74,1024	0/0:13,0:13:36.12:0,36,495
chr10	30124058	.	T	TG	16602.44	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-11.916;DP=610;FS=0.489;HRun=7;HaplotypeScore=57.5367;InbreedingCoeff=0.9697;MQ=83.64;MQ0=0;MQRankSum=-5.865;QD=30.80;ReadPosRankSum=4.543;VQSLOD=4.6434;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,20:28:60.18:725,60,0	1/1:1,10:11:27.08:326,27,0	0/0:21,0:21:44.13:0,44,480	0/0:14,0:14:29.95:0,30,270	1/1:4,19:23:54.17:651,54,0	1/1:1,18:19:51.15:608,51,0	1/1:3,13:16:42.13:503,42,0	1/1:6,27:33:78.23:930,78,0	1/1:1,22:23:66.20:796,66,0	1/1:3,17:20:51.14:604,51,0	1/1:2,20:22:60.18:717,60,0	1/1:2,17:19:51.16:616,51,0	1/1:3,33:36:96.29:1160,96,0	1/1:1,21:22:57.17:687,57,0	1/1:3,28:31:75.23:900,75,0	1/1:2,27:29:75.23:906,75,0	0/0:26,0:26:69.03:0,69,645	0/0:10,0:10:30.05:0,30,290	1/1:5,13:18:35.54:466,36,0	1/1:4,30:34:87.24:1036,87,0	1/1:6,18:24:34.21:681,34,0	1/1:3,16:20:51.49:595,51,0	1/1:2,20:22:60.18:725,60,0	1/1:0,7:7:21.06:254,21,0	1/1:0,18:18:54.17:652,54,0	1/1:4,25:29:75.23:906,75,0	1/1:0,30:30:90.28:1087,90,0	1/1:2,3:5:6.02:72,6,0
chr10	30130122	.	CTTG	C	1249.92	PASS	AB=0.988;AC=26;AF=0.464;AN=56;BaseQRankSum=8.469;DP=507;FS=31.186;HRun=0;HaplotypeScore=106.0206;InbreedingCoeff=-0.4713;MQ=72.56;MQ0=2;MQRankSum=-4.076;QD=3.06;ReadPosRankSum=9.151;VQSLOD=-0.2546;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:17,0:17:5.94:40,0,6	0/1:10,0:10:29.30:29,0,74	0/0:23,0:16:23:0,23,315	0/0:16,0:14:11.19:0,11,189	0/1:30,1:31:99:159,0,159	0/1:26,0:26:82.02:82,0,130	1/1:6,0:6:3.44:38,3,0	0/1:27,0:27:38.44:38,0,219	0/0:10,0:10:10.12:0,10,111	0/1:14,0:14:49.94:50,0,103	0/1:34,0:34:89.35:143,0,89	0/1:15,0:15:11.69:99,0,12	0/1:19,0:19:22.78:23,0,154	0/1:12,0:12:43.30:87,0,43	0/0:16,0:16:19.74:0,20,174	0/1:16,0:16:30.97:87,0,31	1/1:16,0:16:11.83:90,12,0	0/1:15,0:14:18.78:19,0,95	0/1:16,0:16:35.17:35,0,147	0/1:28,1:29:99:121,0,159	0/1:8,1:9:56.38:56,0,74	0/1:13,1:14:38.15:38,0,130	0/1:17,0:17:52.26:52,0,105	0/1:10,0:10:39.09:39,0,58	0/1:21,0:21:76.17:76,0,82	0/0:34,0:34:9:0,9,320	0/1:29,0:29:2.61:3,0,78	1/1:5,0:5:1.05:4,1,0
chr10	30130125	.	GTTT	G	7193.05	PASS	AB=0.724;AC=51;AF=0.911;AN=56;BaseQRankSum=-5.457;DP=512;FS=4.298;HRun=16;HaplotypeScore=89.3222;InbreedingCoeff=0.3484;MQ=73.28;MQ0=3;MQRankSum=-3.409;QD=14.80;ReadPosRankSum=5.894;VQSLOD=3.4432;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,14:17:19.43:209,19,0	1/1:4,5:9:14.89:161,15,0	0/0:24,0:17:23.56:0,24,279	0/1:16,0:15:9.37:9,0,107	1/1:12,21:33:57.48:580,57,0	1/1:7,17:25:43.70:418,44,0	1/1:0,6:7:13.51:159,14,0	0/1:11,16:29:6.11:348,0,6	1/1:5,5:10:2.83:32,3,0	1/1:5,8:14:26.84:268,27,0	1/1:7,22:31:44.62:524,45,0	1/1:2,13:15:39.02:420,39,0	1/1:9,7:19:16.77:218,17,0	1/1:3,10:13:23.89:258,24,0	1/1:8,1:16:23.26:152,23,0	1/1:3,11:15:35.83:336,36,0	1/1:2,14:16:33.07:355,33,0	1/1:9,7:15:8.73:97,9,0	1/1:6,12:19:32.56:301,33,0	1/1:7,19:27:45.49:461,45,0	1/1:4,4:8:11.93:125,12,0	1/1:8,6:14:17.85:181,18,0	1/1:4,13:17:18.48:222,18,0	0/1:4,7:11:3.01:173,0,3	1/1:6,15:22:36.09:416,36,0	1/1:11,1:32:58.67:367,59,0	1/1:3,1:30:56.76:351,57,0	1/1:1,0:4:8.81:52,9,0
chr10	30132232	.	TAA	T	7963.64	PASS	AB=0.832;AC=49;AF=0.875;AN=56;BaseQRankSum=-4.544;DP=608;FS=3.608;HRun=15;HaplotypeScore=84.2434;InbreedingCoeff=0.5661;MQ=73.33;MQ0=2;MQRankSum=0.276;QD=14.32;ReadPosRankSum=4.171;VQSLOD=4.3534;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,30:36:80.59:699,81,0	1/1:5,7:12:17.92:158,18,0	0/1:21,0:17:2.23:2,0,167	0/1:14,0:10:15.19:15,0,56	1/1:6,19:26:49.19:432,49,0	1/1:6,20:27:59.65:514,60,0	1/1:7,10:18:29.65:250,30,0	1/1:6,18:25:47.59:408,48,0	0/1:3,17:20:22.02:275,0,22	1/1:4,11:16:32.60:276,33,0	1/1:4,17:23:40.05:324,40,0	1/1:6,16:22:37.16:340,37,0	1/1:8,10:19:15.84:264,16,0	1/1:10,16:28:28.97:292,29,0	1/1:7,21:28:50.86:449,51,0	1/1:2,14:17:18.07:320,18,0	0/0:13,0:31:36.01:0,36,338	0/0:12,0:21:57.02:0,57,596	1/1:7,16:23:41.75:361,42,0	1/1:3,17:21:44.52:381,45,0	1/1:5,8:15:19.99:169,20,0	1/1:11,16:28:42.77:378,43,0	1/1:5,13:18:7.66:238,8,0	1/1:5,11:16:26.87:238,27,0	1/1:4,15:19:32.85:291,33,0	1/1:5,20:26:59.59:510,60,0	1/1:11,16:29:20.61:273,21,0	1/1:3,4:7:11.97:106,12,0
chr10	30133478	.	A	ACC	8590.79	PASS	AB=0.987;AC=35;AF=0.625;AN=56;BaseQRankSum=12.002;DP=742;FS=3.730;HRun=3;HaplotypeScore=115.7736;InbreedingCoeff=-0.0292;MQ=58.01;MQ0=22;MQRankSum=4.076;QD=14.66;ReadPosRankSum=4.501;VQSLOD=2.1540;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:47,0:46:47.19:743,47,0	1/1:12,0:11:29.99:259,30,0	0/0:32,0:12:3.85:0,4,238	0/0:52,0:16:36.65:0,37,419	0/1:19,2:19:43.82:271,0,44	1/1:17,0:17:23.97:289,24,0	0/1:28,0:28:3.30:389,0,3	1/1:24,0:16:9.09:220,9,0	1/1:33,0:34:74.99:665,75,0	0/1:21,0:21:43.04:307,0,43	0/1:13,0:13:17.58:109,0,18	0/1:36,0:35:47.53:579,0,48	1/1:19,0:18:6.09:295,6,0	0/1:20,0:19:67.69:270,0,68	0/1:32,0:31:84.28:509,0,84	0/1:20,0:21:67.13:235,0,67	0/0:42,0:41:99:0,117,1497	0/0:27,0:26:66.22:0,66,918	0/1:20,0:14:47.86:192,0,48	1/1:20,0:19:20:313,20,0	1/1:40,0:38:0.42:598,0,0	0/1:19,0:19:7.82:258,0,8	1/1:17,1:17:35.37:313,35,0	0/1:39,0:38:99:449,0,102	1/1:18,0:18:41.94:352,42,0	0/1:27,0:25:30.88:353,0,31	0/1:29,1:26:8.17:403,0,8	1/1:10,0:10:26.97:222,27,0
chr10	30133480	.	C	CCT	18233.08	PASS	AB=0.670;AC=45;AF=0.804;AN=56;BaseQRankSum=-11.403;DP=791;FS=0.000;HRun=0;HaplotypeScore=91.4541;InbreedingCoeff=0.4670;MQ=57.72;MQ0=23;MQRankSum=1.465;QD=27.42;ReadPosRankSum=1.227;VQSLOD=6.0614;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,40:47:90.31:1484,90,0	1/1:1,11:11:30.10:495,30,0	0/1:42,0:13:4.08:4,0,202	0/0:58,0:17:33.36:0,33,376	0/1:7,15:20:35.71:502,0,36	1/1:4,15:19:36.12:582,36,0	1/1:9,22:33:50.87:885,51,0	1/1:12,13:19:39.11:596,39,0	1/1:2,32:36:75.26:1236,75,0	1/1:7,15:22:10.63:680,11,0	0/1:3,11:14:14.66:229,0,15	1/1:8,28:37:49.78:1289,50,0	1/1:3,18:21:39.13:643,39,0	1/1:8,14:22:1.61:556,2,0	1/1:9,24:32:10.06:1026,10,0	0/1:4,16:21:32.67:505,0,33	0/0:41,0:40:99:0,102,1273	0/0:26,0:25:72.13:0,72,839	0/1:10,10:14:1.24:472,0,1	1/1:5,17:22:39.13:631,39,0	1/1:9,31:41:73.15:1363,73,0	1/1:7,14:21:35.68:594,36,0	1/1:2,14:17:35.52:590,36,0	1/1:10,30:40:28.72:1002,29,0	1/1:2,15:17:42.14:690,42,0	1/1:8,20:26:60.13:917,60,0	1/1:10,19:26:51.17:818,51,0	1/1:0,10:10:27.09:446,27,0
chr10	30137815	.	GT	G	11606.72	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=0.634;DP=568;FS=2.358;HRun=9;HaplotypeScore=85.7815;InbreedingCoeff=0.9825;MQ=73.39;MQ0=7;MQRankSum=-7.503;QD=22.28;ReadPosRankSum=5.557;VQSLOD=5.1904;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,16:17:48.02:439,48,0	1/1:2,11:13:30.01:275,30,0	0/0:27,0:23:60.45:0,60,615	0/0:19,0:15:28.25:0,28,333	1/1:1,30:28:78.04:713,78,0	1/1:2,23:25:69.03:631,69,0	1/1:3,16:19:39.02:357,39,0	1/1:7,25:32:71.98:640,72,0	1/1:1,18:18:48.03:439,48,0	1/1:3,20:23:60.01:544,60,0	1/1:1,18:18:45.02:412,45,0	1/1:2,23:25:62.80:553,63,0	1/1:1,21:21:47.75:439,48,0	1/1:0,16:15:39.02:357,39,0	1/1:3,20:23:57.03:521,57,0	1/1:3,23:23:60.03:549,60,0	1/1:2,25:26:68.07:610,68,0	1/1:1,6:7:12.01:110,12,0	1/1:2,15:16:42.02:384,42,0	1/1:4,21:23:63.03:576,63,0	1/1:1,13:14:39.02:357,39,0	1/1:3,12:14:33.02:302,33,0	1/1:1,14:15:30:269,30,0	1/1:1,10:11:27.01:247,27,0	1/1:1,16:16:42.02:384,42,0	1/1:1,19:20:57:512,57,0	1/1:4,24:26:69.02:631,69,0	1/1:0,14:14:39.02:357,39,0
chr10	30138098	.	AG	A	9232.10	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-2.225;DP=585;FS=5.483;HRun=11;HaplotypeScore=79.6739;InbreedingCoeff=0.7819;MQ=74.78;MQ0=0;MQRankSum=-2.648;QD=16.46;ReadPosRankSum=0.817;VQSLOD=5.7731;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,21:27:44.93:369,45,0	1/1:2,8:10:17.65:147,18,0	0/0:14,0:13:11.79:0,12,87	0/0:9,0:10:0.47:0,0,1	1/1:8,15:25:45.98:355,46,0	1/1:4,13:19:5.05:226,5,0	1/1:5,23:28:68.91:566,69,0	1/1:13,23:38:72.91:572,73,0	1/1:5,14:19:29.96:246,30,0	1/1:3,12:15:35.92:291,36,0	1/1:8,7:15:26.95:221,27,0	1/1:1,21:22:62.92:517,63,0	1/1:3,21:25:58.97:474,59,0	1/1:3,23:27:70.93:568,71,0	1/1:5,23:28:56.90:468,57,0	1/1:2,19:22:21:368,21,0	1/1:4,20:25:52.97:425,53,0	1/1:6,21:27:30.92:461,31,0	1/1:4,11:15:32.94:268,33,0	1/1:4,13:19:42.05:313,42,0	1/1:8,10:20:28.01:208,28,0	1/1:2,10:12:23.97:197,24,0	1/1:3,10:14:29.01:228,29,0	1/1:3,24:27:59.92:492,60,0	1/1:5,15:21:37.99:301,38,0	1/1:16,9:25:40.95:324,41,0	1/1:4,23:28:58.95:474,59,0	1/1:0,7:8:20.02:154,20,0
chr10	30138416	.	GC	G	17866.29	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=2.723;DP=695;FS=9.964;HRun=5;HaplotypeScore=72.7539;InbreedingCoeff=0.9952;MQ=88.31;MQ0=0;MQRankSum=-6.353;QD=29.78;ReadPosRankSum=4.405;VQSLOD=5.0373;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,32:33:90.26:1020,90,0	1/1:0,9:9:27.08:306,27,0	0/0:25,0:25:72.21:0,72,940	0/0:26,0:26:58.91:0,59,701	1/1:4,14:18:39.10:433,39,0	1/1:0,25:25:72.21:816,72,0	1/1:0,27:27:57.16:647,57,0	1/1:1,28:29:84.24:947,84,0	1/1:1,25:26:69.20:782,69,0	1/1:0,23:23:66.16:735,66,0	1/1:0,21:21:51.14:573,51,0	1/1:0,31:31:89.92:993,90,0	1/1:1,29:30:72.20:812,72,0	1/1:2,30:32:78.22:884,78,0	1/1:0,29:29:78.22:884,78,0	1/1:2,45:47:99:1463,129,0	0/0:26,0:26:75.25:0,75,1022	0/0:18,0:18:48.11:0,48,612	1/1:0,22:22:60.17:678,60,0	1/1:0,27:27:66.18:740,66,0	1/1:0,25:25:72.21:817,72,0	1/1:1,18:19:51.14:573,51,0	1/1:2,12:14:33.09:374,33,0	1/1:0,26:26:72.21:817,72,0	1/1:0,19:19:48.14:544,48,0	1/1:2,27:29:81.20:905,81,0	1/1:1,33:34:84.24:952,84,0	1/1:0,5:5:15.04:170,15,0
chr10	30139024	.	A	AT	20252.20	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=5.274;DP=712;FS=14.778;HRun=6;HaplotypeScore=123.5756;InbreedingCoeff=0.9996;MQ=83.25;MQ0=0;MQRankSum=-5.666;QD=32.20;ReadPosRankSum=2.771;VQSLOD=3.1112;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,29:33:84.25:1043,84,0	1/1:0,10:10:30.10:377,30,0	0/0:24,0:24:57.58:0,58,572	0/0:17,0:17:42.09:0,42,427	1/1:3,30:34:93.26:1148,93,0	1/1:3,24:27:66.21:830,66,0	1/1:1,14:15:42.13:528,42,0	1/1:6,32:38:96.31:1207,96,0	1/1:2,21:23:63.20:793,63,0	1/1:2,29:31:87.28:1093,87,0	1/1:3,20:23:60.19:747,60,0	1/1:4,22:26:66.21:830,66,0	1/1:2,30:32:84.27:1057,84,0	1/1:3,12:15:33.11:415,33,0	1/1:5,29:34:81.26:1019,81,0	1/1:1,34:35:90.29:1132,90,0	0/0:24,0:24:66.15:0,66,673	0/0:18,0:18:54.12:0,54,551	1/1:4,27:31:75.24:940,75,0	1/1:4,23:27:66.21:823,66,0	1/1:0,19:19:54.17:679,54,0	1/1:2,22:24:66.21:830,66,0	1/1:3,28:31:75.24:943,75,0	1/1:3,13:16:39.12:491,39,0	1/1:3,32:35:87.28:1095,87,0	1/1:4,27:31:78.25:980,78,0	1/1:1,25:27:72.23:904,72,0	1/1:3,9:12:29.53:346,30,0
chr10	30140066	.	T	TTGTGTGTGTGTGTGTG	14427.13	PASS	AB=1.000;AC=53;AF=0.946;AN=56;BaseQRankSum=0.043;DP=632;FS=1.291;HRun=0;HaplotypeScore=266.1484;InbreedingCoeff=0.5119;MQ=58.78;MQ0=8;MQRankSum=-2.945;QD=24.13;ReadPosRankSum=1.630;VQSLOD=2.9738;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:43,0:43:20.83:239,21,0	1/1:7,0:7:11.94:282,12,0	0/0:34,0:21:24.01:0,24,318	0/1:28,0:11:2.98:3,0,30	1/1:21,0:21:9.31:157,9,0	1/1:14,18:32:23.09:1416,23,0	1/1:26,0:25:14.97:259,15,0	1/1:38,0:34:45.12:879,45,0	1/1:20,0:20:24.01:913,24,0	1/1:25,0:22:47.86:1192,48,0	1/1:17,0:17:11.86:121,12,0	1/1:21,0:21:26.91:756,27,0	1/1:24,0:24:32.75:1120,33,0	1/1:23,1:23:35.92:1406,36,0	1/1:26,0:26:24.50:913,25,0	1/1:19,0:19:15.02:606,15,0	1/1:16,0:28:20.51:313,21,0	1/1:9,0:13:14.98:215,15,0	1/1:24,0:24:44.84:1046,45,0	1/1:20,0:20:12.01:355,12,0	1/1:19,0:19:8.06:70,8,0	1/1:20,0:20:3:25,3,0	1/1:16,0:15:11.83:139,12,0	1/1:25,0:25:14.29:211,14,0	1/1:18,0:15:5.82:188,6,0	1/1:20,0:20:47.82:930,48,0	1/1:20,0:20:20.86:547,21,0	1/1:4,0:4:3.95:128,4,0
chr10	30140094	.	G	GTGTGTGTGTGTGTGTA	18397.10	PASS	AB=1.000;AC=48;AF=0.889;AN=54;BaseQRankSum=-2.742;DP=713;FS=0.000;HRun=0;HaplotypeScore=260.9511;InbreedingCoeff=0.4131;MQ=54.03;MQ0=7;MQRankSum=-0.817;QD=29.16;ReadPosRankSum=4.497;VQSLOD=3.4835;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:38,1:40:37.81:513,38,0	1/1:2,9:15:8.03:393,8,0	0/0:27,0:13:23.08:0,23,338	0/1:38,0:18:12.97:13,0,309	1/1:11,0:11:6.02:131,6,0	1/1:16,2:18:19.03:802,19,0	1/1:13,0:39:5.97:374,6,0	1/1:36,0:34:93.06:1607,93,0	1/1:9,11:25:14.96:1119,15,0	1/1:26,0:24:59.83:1590,60,0	1/1:13,0:13:18.03:247,18,0	1/1:9,14:33:9.17:641,9,0	1/1:14,18:37:33.11:1984,33,0	1/1:12,14:32:26.27:1622,26,0	1/1:8,20:37:18.53:1167,19,0	1/1:4,2:28:12.04:664,12,0	0/0:27,0:27:5.64:0,6,269	0/1:13,0:13:99:101,0,362	1/1:17,0:17:45.56:1018,46,0	1/1:11,0:26:3.01:180,3,0	1/1:22,0:22:26.86:302,27,0	./.	1/1:12,0:11:12.03:167,12,0	1/1:22,1:23:15.95:309,16,0	1/1:8,1:17:2.84:181,3,0	1/1:11,0:29:62.83:2038,63,0	1/1:9,12:30:21.04:1047,21,0	1/1:5,0:5:14.98:187,15,0
chr10	30140682	.	C	CAT	596.09	PASS	AB=0.872;AC=8;AF=0.154;AN=52;BaseQRankSum=-3.632;DP=285;FS=0.000;HRun=0;HaplotypeScore=35.5640;InbreedingCoeff=-0.0420;MQ=77.82;MQ0=2;MQRankSum=-1.158;QD=7.10;ReadPosRankSum=0.827;VQSLOD=2.4628;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:13:17.89:0,18,193	./.	1/1:9,0:6:2.92:35,3,0	0/0:21,0:8:4.70:0,5,39	0/0:9,0:9:12.04:0,12,141	0/1:16,0:16:14.80:15,0,326	0/0:5,0:5:9.03:0,9,108	0/0:40,0:43:74.72:0,75,832	0/0:5,0:5:9.01:0,9,97	0/0:9,0:10:11.87:0,12,122	0/1:6,0:6:36.84:37,0,63	0/0:6,0:6:12.04:0,12,143	0/0:9,0:9:6.02:0,6,72	0/0:6,0:6:9.03:0,9,108	0/0:10,0:10:18.05:0,18,216	0/1:9,0:9:5.70:6,0,171	0/1:11,9:21:38.85:399,0,39	0/1:4,6:10:50.89:219,0,51	0/0:7,0:7:12:0,12,129	0/0:8,0:8:6.01:0,6,61	0/0:4,0:4:6.02:0,6,72	./.	0/0:3,0:3:3.01:0,3,36	0/0:6,0:6:12.04:0,12,143	0/0:14,0:14:27.08:0,27,324	0/0:13,0:13:15.04:0,15,180	0/0:5,0:6:11.87:0,12,122	0/1:12,1:13:8.86:9,0,392
chr10	30142414	.	T	TTCTC	2629.15	PASS	AB=1.000;AC=43;AF=0.796;AN=54;BaseQRankSum=-2.922;DP=527;FS=2.372;HRun=0;HaplotypeScore=141.8603;InbreedingCoeff=0.2919;MQ=60.06;MQ0=12;MQRankSum=1.184;QD=5.93;ReadPosRankSum=1.213;VQSLOD=2.8149;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:23:2.76:44,3,0	1/1:6,0:6:2.81:50,3,0	0/1:26,0:12:0:0,0,0	./.	1/1:25,2:27:8.83:136,9,0	1/1:14,1:15:5.31:85,5,0	0/0:12,0:12:5.60:0,6,48	1/1:39,0:38:11.68:68,12,0	0/1:18,0:17:0.33:7,0,0	1/1:23,0:23:18.86:287,19,0	1/1:15,0:15:3.01:48,3,0	0/1:21,0:19:27.12:55,0,27	1/1:16,1:16:3.38:68,3,0	0/0:22,0:22:2.16:0,2,5	0/0:13,0:13:0.47:0,0,1	1/1:27,0:27:16.45:373,16,0	1/1:10,0:10:6.02:83,6,0	1/1:11,0:9:12.01:182,12,0	1/1:16,0:15:9.03:137,9,0	1/1:11,2:12:7.71:176,8,0	0/0:11,0:11:0.34:0,0,0	1/1:13,0:13:5.95:83,6,0	1/1:19,0:19:3:25,3,0	1/1:10,0:10:8.68:82,9,0	1/1:21,0:23:9.19:113,9,0	1/1:26,0:25:26.27:307,26,0	1/1:28,1:28:22.83:300,23,0	1/1:15,0:14:6.61:27,7,0
chr10	30142461	.	T	TCACACA	12285.76	PASS	AB=0.667;AC=49;AF=0.875;AN=56;BaseQRankSum=-6.591;DP=511;FS=0.000;HRun=0;HaplotypeScore=162.4730;InbreedingCoeff=0.4671;MQ=38.39;MQ0=23;MQRankSum=1.590;QD=25.60;ReadPosRankSum=7.125;VQSLOD=3.9827;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:13,7:24:0.79:46,0,1	1/1:4,2:6:5.49:158,5,0	0/0:12,0:1:3.01:0,3,45	0/0:16,0:2:3:0,3,27	1/1:10,19:32:8.13:287,8,0	1/1:8,6:14:6.78:165,7,0	1/1:8,8:14:27.09:757,27,0	1/1:24,6:28:45.15:1068,45,0	1/1:5,12:18:20.38:621,20,0	1/1:8,9:18:30:769,30,0	1/1:6,12:21:26.43:742,26,0	1/1:8,0:23:4.26:88,4,0	1/1:5,7:13:15.05:386,15,0	1/1:5,10:19:15.38:455,15,0	1/1:5,8:15:19.67:583,20,0	1/1:11,9:22:13.64:511,14,0	1/1:6,0:6:9.03:154,9,0	1/1:9,0:7:11.92:113,12,0	1/1:11,8:18:27.09:772,27,0	1/1:11,12:29:22.99:617,23,0	0/0:3,0:2:0:0,0,0	1/1:6,9:18:17:528,17,0	1/1:3,11:19:14.74:360,15,0	1/1:3,5:12:15.52:369,16,0	1/1:7,10:21:6.01:253,6,0	1/1:10,7:17:27.09:676,27,0	1/1:15,17:32:51.16:1422,51,0	1/1:7,4:10:11.87:385,12,0
chr10	30142482	.	C	CACAGAGAG	2179.84	PASS	AB=1.000;AC=26;AF=0.464;AN=56;BaseQRankSum=10.100;DP=511;FS=18.966;HRun=0;HaplotypeScore=184.2183;InbreedingCoeff=-0.5072;MQ=42.82;MQ0=13;MQRankSum=-9.201;QD=5.11;ReadPosRankSum=8.058;VQSLOD=0.6611;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:13.98:0,14,265	0/1:4,0:4:29.28:29,0,43	0/0:17,0:4:5.71:0,6,75	0/0:20,0:2:2.99:0,3,23	0/1:31,0:30:28.30:28,0,104	0/1:18,0:17:17.58:18,0,130	0/1:15,0:13:28.87:78,0,29	0/1:38,0:37:99:126,0,1047	0/1:23,0:22:98.47:98,0,151	0/1:15,0:15:75.71:76,0,127	0/1:19,0:19:58.05:81,0,58	0/0:23,0:23:13.15:0,13,231	0/1:15,0:15:27.44:27,0,138	0/1:19,0:19:63.47:63,0,92	0/1:16,0:16:77.83:96,0,78	0/1:15,0:15:99:142,0,158	1/1:2,7:9:8.77:399,9,0	1/1:5,0:7:11.46:166,11,0	0/1:18,0:17:99:193,0,257	0/1:29,0:29:90.71:100,0,91	0/0:3,0:3:6.91:0,7,106	0/1:17,0:17:67.55:68,0,90	0/1:22,0:21:52.42:53,0,52	1/1:11,0:11:10.52:67,11,0	0/1:22,0:22:71.53:72,0,220	0/1:18,0:17:76.80:77,0,318	0/1:32,0:32:99:214,0,438	0/1:13,0:10:71.39:71,0,72
chr10	30144619	.	T	TA	14670.26	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-9.281;DP=628;FS=8.902;HRun=9;HaplotypeScore=54.6106;InbreedingCoeff=0.9927;MQ=78.94;MQ0=0;MQRankSum=-3.491;QD=25.78;ReadPosRankSum=2.590;VQSLOD=5.2684;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,19:23:51.14:563,51,0	1/1:0,8:8:24.06:266,24,0	0/0:15,0:16:22.69:0,23,219	0/0:14,0:14:23.14:0,23,222	1/1:9,24:33:29.02:741,29,0	1/1:4,22:26:63.17:697,63,0	1/1:3,17:20:48.13:531,48,0	1/1:12,33:45:99:1058,99,0	1/1:3,13:16:36.10:398,36,0	1/1:6,19:25:34.11:605,34,0	1/1:3,33:36:71.08:1004,71,0	1/1:4,17:21:48.13:531,48,0	1/1:3,20:23:31.10:570,31,0	1/1:6,18:24:49:525,49,0	1/1:2,29:31:75.20:830,75,0	1/1:3,19:22:57.15:631,57,0	0/0:17,0:17:41.97:0,42,365	0/0:12,0:12:29.77:0,30,257	1/1:4,14:18:39.02:415,39,0	1/1:7,27:34:78.18:850,78,0	1/1:0,10:10:27.07:299,27,0	1/1:3,17:20:48.13:531,48,0	1/1:0,24:24:66.14:717,66,0	1/1:2,6:8:15.04:166,15,0	1/1:2,27:29:75.04:811,75,0	1/1:3,26:29:49.15:771,49,0	1/1:4,21:25:57.15:631,57,0	1/1:1,18:19:48.13:531,48,0
chr10	30145822	.	T	TTGTAAGAGAACACAGATCAATG	2347.88	PASS	AB=0.713;AC=32;AF=0.941;AN=34;BaseQRankSum=-2.532;DP=42;FS=10.579;HRun=0;HaplotypeScore=37.2974;InbreedingCoeff=-0.1893;MQ=152.07;MQ0=0;MQRankSum=-2.087;QD=57.27;ReadPosRankSum=-1.308;VQSLOD=0.2889;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,0:2:6.02:94,6,0	./.	0/1:4,2:10:2.17:1220,0,2	0/1:3,0:4:11.73:103,0,12	./.	./.	./.	1/1:1,0:1:3:27,3,0	1/1:1,0:1:2.97:20,3,0	1/1:0,0:1:3.01:118,3,0	1/1:3,0:3:5.99:50,6,0	1/1:2,0:2:2.97:20,3,0	1/1:1,0:1:3.01:49,3,0	./.	1/1:1,0:2:5.99:114,6,0	./.	1/1:2,0:2:3.01:48,3,0	1/1:0,0:1:3.01:93,3,0	1/1:1,0:1:3.01:56,3,0	1/1:2,0:2:6.01:94,6,0	1/1:3,0:3:9.02:110,9,0	./.	./.	./.	./.	1/1:1,0:1:3.01:54,3,0	1/1:3,0:4:11.97:161,12,0	./.
chr10	30146093	.	GT	G	13006.34	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=0.643;DP=501;FS=0.551;HRun=5;HaplotypeScore=49.7663;InbreedingCoeff=0.9838;MQ=73.27;MQ0=0;MQRankSum=-2.207;QD=29.03;ReadPosRankSum=3.261;VQSLOD=4.9193;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,12:14:33.09:374,33,0	1/1:1,8:9:21.06:238,21,0	0/0:14,0:14:39.08:0,39,477	0/0:7,0:7:11.65:0,12,142	1/1:1,27:28:72.01:768,72,0	1/1:2,15:17:39.11:442,39,0	1/1:0,12:12:30.04:326,30,0	1/1:2,28:30:84.17:906,84,0	1/1:0,11:11:33.05:360,33,0	1/1:3,23:26:66.19:748,66,0	1/1:0,28:28:84.24:952,84,0	1/1:0,19:19:54.15:612,54,0	1/1:2,19:21:54.15:612,54,0	1/1:0,20:20:51.15:578,51,0	1/1:0,21:21:54.11:598,54,0	1/1:1,17:18:45.13:510,45,0	0/0:16,0:16:48.05:0,48,612	0/0:16,0:16:48.12:0,48,633	1/1:2,10:12:30.08:334,30,0	1/1:2,24:26:66.12:731,66,0	1/1:0,7:7:15.04:170,15,0	1/1:0,15:15:33.09:374,33,0	1/1:0,16:16:45.13:510,45,0	1/1:0,8:8:24.07:272,24,0	1/1:2,14:16:39.08:429,39,0	1/1:1,28:29:83.86:905,84,0	1/1:3,32:35:81.23:918,81,0	1/1:0,10:10:30.09:340,30,0
chr10	30147226	.	CA	C	10490.23	PASS	AB=0.825;AC=49;AF=0.875;AN=56;BaseQRankSum=7.650;DP=573;FS=6.578;HRun=10;HaplotypeScore=58.9230;InbreedingCoeff=0.5942;MQ=71.05;MQ0=0;MQRankSum=0.240;QD=19.87;ReadPosRankSum=1.362;VQSLOD=5.7918;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,24:28:62.98:547,63,0	1/1:2,8:10:23.99:208,24,0	0/1:7,1:9:0.25:0,0,78	0/1:10,0:10:19.20:19,0,19	1/1:2,27:29:71.97:625,72,0	1/1:5,17:22:47.99:417,48,0	1/1:2,7:9:17.99:156,18,0	1/1:4,14:18:11.81:331,12,0	1/1:2,16:18:44.99:391,45,0	1/1:6,22:28:42.73:538,43,0	1/1:2,13:16:38.02:319,38,0	1/1:2,15:17:41.99:365,42,0	1/1:1,16:17:47.98:417,48,0	1/1:1,27:28:71.98:625,72,0	1/1:1,23:24:65.99:573,66,0	1/1:2,20:22:56.99:495,57,0	0/0:26,0:26:66.18:0,66,730	0/0:18,1:19:25.07:0,25,498	1/1:4,23:27:68.96:599,69,0	1/1:4,21:25:62.98:547,63,0	1/1:1,12:13:9.42:237,9,0	1/1:5,12:17:26.97:234,27,0	1/1:2,26:28:74.98:651,75,0	0/1:5,14:19:41.19:268,0,41	1/1:2,19:21:53.98:469,54,0	1/1:2,22:24:65.96:568,66,0	1/1:5,31:37:83.01:709,83,0	1/1:4,7:11:20.98:182,21,0
chr10	30147813	.	GA	G	449.08	PASS	AB=0.916;AC=6;AF=0.107;AN=56;BaseQRankSum=7.346;DP=559;FS=7.071;HRun=11;HaplotypeScore=58.3967;InbreedingCoeff=0.6868;MQ=76.42;MQ0=0;MQRankSum=0.366;QD=8.81;ReadPosRankSum=1.567;VQSLOD=2.0218;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:72.16:0,72,754	0/0:11,0:11:27.07:0,27,288	0/0:17,0:17:24.02:0,24,234	0/1:8,1:10:8.63:9,0,57	0/0:20,0:20:54.13:0,54,569	0/0:19,0:19:51.13:0,51,544	0/0:17,0:17:33.08:0,33,352	0/0:32,1:33:45.42:0,45,681	0/0:25,0:26:56.29:0,56,621	0/0:22,0:22:48.11:0,48,506	0/0:33,2:35:35.42:0,35,756	0/0:21,1:23:35.32:0,35,551	0/0:20,0:21:47.23:0,47,519	0/0:18,1:20:11.27:0,11,302	0/0:21,0:21:57.13:0,57,600	0/0:20,0:21:50.96:0,51,526	1/1:0,14:14:35.94:296,36,0	1/1:4,11:15:32.92:271,33,0	0/0:18,0:20:50.77:0,51,498	0/0:24,1:25:29.44:0,29,500	0/0:13,0:15:35.92:0,36,366	0/0:19,1:20:29.48:0,29,512	0/1:11,1:12:0.59:1,0,194	0/0:13,1:14:17.46:0,17,391	0/0:19,1:20:23.48:0,23,455	0/0:23,1:24:44.51:0,45,663	0/0:17,1:17:23.45:0,23,439	0/0:14,1:17:12.72:0,13,399
chr10	30149249	.	TA	T	6968.99	PASS	AB=0.736;AC=47;AF=0.839;AN=56;BaseQRankSum=3.143;DP=507;FS=1.248;HRun=12;HaplotypeScore=57.5802;InbreedingCoeff=0.5412;MQ=72.35;MQ0=2;MQRankSum=-0.130;QD=15.22;ReadPosRankSum=-0.140;VQSLOD=5.5557;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:9,22:32:17.01:241,0,17	1/1:2,7:10:19.96:145,20,0	0/1:15,0:15:3.76:4,0,82	0/0:10,0:7:2.50:0,2,9	1/1:6,22:28:65.72:511,66,0	1/1:2,8:10:20.91:163,21,0	1/1:4,10:14:26.88:209,27,0	1/1:8,19:28:58.77:443,59,0	1/1:1,10:11:18.40:141,18,0	1/1:4,15:20:46.84:351,47,0	1/1:0,15:17:45.90:337,46,0	1/1:2,14:17:43.87:331,44,0	1/1:2,14:17:45.69:336,46,0	1/1:6,12:19:34.88:261,35,0	1/1:3,19:22:20.36:341,20,0	1/1:2,17:19:41.64:325,42,0	0/0:25,0:24:57.11:0,57,574	0/0:14,0:14:39.08:0,39,395	1/1:5,15:20:44.27:327,44,0	1/1:5,22:30:65.82:482,66,0	1/1:1,4:9:18.06:111,18,0	1/1:3,14:17:3.66:222,4,0	1/1:3,16:20:49.84:377,50,0	0/1:2,3:5:21.26:37,0,21	1/1:2,18:21:58.81:446,59,0	1/1:4,22:29:35.40:428,35,0	1/1:6,17:24:46.83:354,47,0	1/1:0,3:3:5.98:46,6,0
chr10	30151619	.	GT	G	665.88	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=4.412;DP=423;FS=0.000;HRun=8;HaplotypeScore=63.5384;InbreedingCoeff=0.8955;MQ=74.27;MQ0=0;MQRankSum=-1.681;QD=20.18;ReadPosRankSum=2.215;VQSLOD=3.6125;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:20:57.17:0,57,688	0/0:8,0:8:18.06:0,18,217	0/0:15,0:15:32.63:0,33,344	0/0:15,0:14:32.42:0,32,376	0/0:16,0:16:39.11:0,39,460	0/0:12,0:12:30.09:0,30,362	0/0:16,0:17:48.01:0,48,558	0/0:22,0:22:45.14:0,45,544	0/0:14,0:14:36.10:0,36,425	0/0:21,0:21:54.17:0,54,652	0/0:22,0:22:51.15:0,51,607	0/0:17,0:17:39.12:0,39,471	0/0:14,0:14:30.09:0,30,362	0/0:10,0:10:21.06:0,21,254	0/0:22,0:22:57.17:0,57,688	0/0:15,0:15:39.12:0,39,471	1/1:3,10:12:27.04:261,27,0	1/1:2,18:20:54.09:526,54,0	0/0:10,0:10:27.04:0,27,310	0/0:17,0:17:48.10:0,48,562	0/0:6,0:6:18.06:0,18,217	0/0:22,0:22:51.14:0,51,603	0/0:8,0:8:18.06:0,18,217	0/0:6,0:6:15.05:0,15,181	0/0:15,0:14:39.12:0,39,470	0/0:23,0:23:66.20:0,66,787	0/0:17,0:18:51.01:0,51,582	0/0:4,0:4:3.01:0,3,36
chr10	30151671	.	TACACACACACACAC	T	3669.76	PASS	AB=0.778;AC=28;AF=0.667;AN=42;BaseQRankSum=-0.346;DP=459;FS=22.777;HRun=0;HaplotypeScore=172.4443;InbreedingCoeff=0.1898;MQ=46.94;MQ0=39;MQRankSum=-0.560;QD=14.92;ReadPosRankSum=1.252;VQSLOD=1.3053;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:15,2:15:26.49:65,0,26	1/1:3,4:7:6.02:226,6,0	0/0:22,0:10:3.01:0,3,45	0/0:27,0:14:3.01:0,3,40	./.	1/1:7,14:19:3.01:115,3,0	./.	0/1:17,10:26:68.75:197,0,69	1/1:11,7:16:9.03:233,9,0	1/1:11,11:18:23.69:553,24,0	./.	1/1:9,8:16:2.29:114,2,0	1/1:3,7:10:4.42:218,4,0	1/1:8,7:13:3.01:116,3,0	./.	1/1:5,10:15:3.01:116,3,0	0/0:16,0:13:27.52:0,28,414	0/0:20,0:17:13.51:0,14,203	1/1:11,5:14:12.15:197,12,0	1/1:7,11:18:3.01:115,3,0	1/1:6,0:4:3.01:37,3,0	./.	./.	0/0:7,0:4:0:0,0,0	./.	0/1:11,5:16:99:706,0,114	0/1:9,3:13:10.07:428,0,10	1/1:2,3:3:6.02:233,6,0
chr10	30151848	.	GTA	G	1300.97	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.055;DP=606;FS=4.328;HRun=0;HaplotypeScore=72.0572;InbreedingCoeff=0.9954;MQ=80.50;MQ0=2;MQRankSum=-1.119;QD=36.14;ReadPosRankSum=2.061;VQSLOD=6.0727;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:60.21:0,60,1157	0/0:8,0:8:24.05:0,24,397	0/0:20,0:20:43.92:0,44,937	0/0:15,0:15:18.92:0,19,530	0/0:26,0:26:75.22:0,75,1379	0/0:27,0:27:81.25:0,81,1495	0/0:19,0:19:54.17:0,54,1008	0/0:38,0:38:99:0,111,2074	0/0:18,0:18:54.19:0,54,1042	0/0:21,0:21:63.21:0,63,1169	0/0:25,0:25:75.24:0,75,1403	0/0:14,0:14:36.12:0,36,694	0/0:27,0:27:75.26:0,75,1446	0/0:30,0:30:87.26:0,87,1571	0/0:25,0:25:75.26:0,75,1429	0/0:23,0:23:63.22:0,63,1207	1/1:0,20:19:54.18:826,54,0	1/1:1,15:15:39.13:597,39,0	0/0:24,0:24:69.24:0,69,1330	0/0:18,0:18:54.16:0,54,1008	0/0:18,0:18:51.17:0,51,984	0/0:23,0:23:69.22:0,69,1290	0/0:20,0:20:57.20:0,57,1101	0/0:18,0:18:54.17:0,54,1008	0/0:22,0:22:66.23:0,66,1275	0/0:27,0:27:81.27:0,81,1527	0/0:32,0:32:96.31:0,96,1809	0/0:12,0:12:36.12:0,36,676
chr10	30153471	.	T	TA	1297.67	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-9.150;DP=758;FS=1.247;HRun=8;HaplotypeScore=72.0435;InbreedingCoeff=1.0000;MQ=82.65;MQ0=0;MQRankSum=-2.197;QD=26.48;ReadPosRankSum=-0.046;VQSLOD=4.1707;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:81.04:0,81,741	0/0:16,0:16:45.02:0,45,412	0/0:24,0:24:45:0,45,405	0/0:22,0:22:44.97:0,45,398	0/0:34,0:34:99:0,99,900	0/0:25,0:25:60.01:0,60,545	0/0:18,0:18:48.02:0,48,439	0/0:32,0:32:69.01:0,69,631	0/0:32,0:32:84.02:0,84,764	0/0:43,0:43:99:0,113,1060	0/0:27,0:27:78.04:0,78,714	0/0:24,0:24:60.01:0,60,545	0/0:32,0:32:93.05:0,93,851	0/0:39,0:39:99:0,105,952	0/0:31,0:31:84.04:0,84,769	0/0:31,0:31:84.01:0,84,760	1/1:4,22:26:66.20:762,66,0	1/1:2,21:23:57.17:658,57,0	0/0:21,0:21:54:0,54,486	0/0:28,0:28:78.02:0,78,709	0/0:25,0:25:69.04:0,69,632	0/0:30,0:30:84.04:0,84,769	0/0:23,0:23:53.88:0,54,482	0/0:24,0:24:66.01:0,66,599	0/0:27,0:26:75.04:0,75,686	0/0:27,0:27:72:0,72,652	0/0:26,0:26:65.98:0,66,594	0/0:19,0:19:57.03:0,57,522
chr10	30156541	.	GC	G	834.33	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.230;DP=691;FS=7.557;HRun=8;HaplotypeScore=68.6063;InbreedingCoeff=0.9995;MQ=85.01;MQ0=0;MQRankSum=-3.915;QD=21.96;ReadPosRankSum=1.667;VQSLOD=4.2302;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:78.20:0,78,907	0/0:12,0:12:36.11:0,36,435	0/0:29,1:31:52.10:0,52,857	0/0:22,0:22:45.11:0,45,510	0/0:33,0:33:87.27:0,87,1048	0/0:30,0:30:75.22:0,75,886	0/0:23,0:23:60.18:0,60,725	0/0:31,0:31:72.20:0,72,850	0/0:25,0:25:69.20:0,69,823	0/0:21,0:21:48.15:0,48,580	0/0:19,0:19:54.17:0,54,651	0/0:32,1:33:64.29:0,64,1034	0/0:29,0:29:84.21:0,84,988	0/0:19,0:19:51.16:0,51,616	0/0:25,0:25:75.21:0,75,893	0/0:25,0:25:60.18:0,60,725	1/1:3,15:18:45.07:435,45,0	1/1:0,20:20:54.09:521,54,0	0/0:20,0:20:45.13:0,45,532	0/0:23,1:24:43.25:0,43,800	0/0:36,3:39:35.30:0,35,970	0/0:19,0:19:45.14:0,45,543	0/0:12,0:12:30.09:0,30,361	0/0:32,0:32:96.27:0,96,1138	0/0:31,0:31:72.21:0,72,860	0/0:27,0:27:69.20:0,69,824	0/0:26,0:26:72.19:0,72,854	0/0:14,0:14:39.11:0,39,459
chr10	30157943	.	TG	T	823.87	PASS	AB=0.905;AC=7;AF=0.125;AN=56;BaseQRankSum=5.899;DP=671;FS=0.532;HRun=10;HaplotypeScore=76.7374;InbreedingCoeff=0.5812;MQ=82.70;MQ0=0;MQRankSum=-1.341;QD=8.16;ReadPosRankSum=3.316;VQSLOD=2.0622;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,1:38:52.02:0,52,740	0/1:11,1:12:1.99:2,0,207	0/0:22,0:22:28.69:0,29,244	0/0:23,0:23:37.99:0,38,366	0/0:25,0:25:39.05:0,39,403	0/0:19,1:21:18.90:0,19,420	0/0:29,3:32:20.03:0,20,649	0/0:19,1:20:9.99:0,10,307	0/0:26,0:26:48.13:0,48,531	0/1:16,2:18:1.95:2,0,202	0/0:10,0:10:21.02:0,21,209	0/0:40,1:41:82.68:0,83,1106	0/1:22,3:25:12.06:12,0,512	0/0:26,2:29:16.88:0,17,606	0/0:33,1:34:49.13:0,49,763	0/0:33,1:35:42.94:0,43,664	1/1:6,20:26:56.98:495,57,0	1/1:2,18:20:50.99:443,51,0	0/0:27,1:28:27.97:0,28,504	0/0:10,0:10:21.04:0,21,224	0/0:44,0:44:78.17:0,78,833	0/0:21,0:21:42.10:0,42,455	0/0:17,0:17:39.04:0,39,399	0/0:28,0:28:63.15:0,63,682	0/0:19,0:19:36.08:0,36,384	0/0:20,0:20:24.01:0,24,252	0/0:17,1:18:16.02:0,16,391	0/0:9,0:9:17.99:0,18,186
chr10	30159399	.	G	GC	16006.93	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-9.257;DP=698;FS=11.286;HRun=7;HaplotypeScore=70.2643;InbreedingCoeff=0.9931;MQ=75.98;MQ0=0;MQRankSum=-3.304;QD=27.55;ReadPosRankSum=0.590;VQSLOD=4.9234;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,39:51:99:1319,111,0	1/1:1,8:9:24.07:290,24,0	0/0:22,0:18:26.06:0,26,294	0/0:29,0:28:20.66:0,21,339	1/1:2,16:18:42.13:506,42,0	1/1:4,21:25:60.18:725,60,0	1/1:6,21:27:57.17:689,57,0	1/1:9,14:23:43.01:509,43,0	1/1:2,20:22:63.19:760,63,0	1/1:2,13:15:39.12:471,39,0	1/1:1,21:22:57.17:686,57,0	1/1:4,25:29:63.19:761,63,0	1/1:3,25:28:34.22:695,34,0	1/1:2,21:23:54.15:652,54,0	1/1:3,30:33:78.24:942,78,0	1/1:7,24:31:66.20:797,66,0	0/0:33,0:33:87.14:0,87,839	0/0:32,0:32:84.10:0,84,805	1/1:5,5:10:15.03:168,15,0	1/1:0,13:13:36.07:418,36,0	1/1:4,30:36:77.97:899,78,0	1/1:2,18:20:45.14:543,45,0	1/1:2,20:22:54.15:639,54,0	1/1:4,32:36:93.04:1123,93,0	1/1:1,18:19:48.15:579,48,0	1/1:6,29:36:84.17:979,84,0	1/1:4,16:20:42.13:507,42,0	1/1:4,9:13:30.08:351,30,0
chr10	30160642	.	T	TTATC	3456.38	PASS	AB=0.794;AC=33;AF=0.786;AN=42;BaseQRankSum=-2.525;DP=653;FS=1.673;HRun=0;HaplotypeScore=82.0579;InbreedingCoeff=0.4127;MQ=47.61;MQ0=12;MQRankSum=1.307;QD=8.27;ReadPosRankSum=0.815;VQSLOD=2.0976;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:24:2.99:24,3,0	1/1:15,0:15:3.01:52,3,0	./.	./.	1/1:18,5:22:6.02:135,6,0	0/1:20,7:26:26.08:323,0,26	./.	./.	1/1:18,8:27:21.07:475,21,0	1/1:19,0:18:6.02:87,6,0	1/1:18,0:18:6.02:113,6,0	1/1:14,7:23:9.03:203,9,0	1/1:21,10:31:21.07:476,21,0	1/1:29,0:29:15.05:295,15,0	1/1:30,0:30:3.01:61,3,0	1/1:30,0:27:6.02:103,6,0	0/0:14,0:12:3:0,3,28	0/0:11,0:8:3.01:0,3,44	1/1:26,0:23:9.02:127,9,0	./.	1/1:16,0:16:6:72,6,0	1/1:12,0:12:8.98:113,9,0	0/0:21,0:20:5.99:0,6,65	0/0:12,0:12:8.95:0,9,85	1/1:21,14:36:33.11:747,33,0	1/1:24,0:23:3.01:50,3,0	./.	./.
chr10	30161363	.	T	TG	6493.93	PASS	AB=0.638;AC=41;AF=0.759;AN=54;BaseQRankSum=-5.115;DP=374;FS=0.000;HRun=9;HaplotypeScore=48.4582;InbreedingCoeff=0.2769;MQ=82.27;MQ0=0;MQRankSum=-2.528;QD=18.88;ReadPosRankSum=0.648;VQSLOD=4.6889;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:8,15:23:35.71:323,0,36	./.	0/1:18,1:18:14.30:14,0,149	0/0:8,0:8:3.64:0,4,48	1/1:6,7:13:15:152,15,0	1/1:4,9:13:24.06:265,24,0	1/1:3,15:18:36.09:393,36,0	1/1:8,6:14:16.23:145,16,0	1/1:6,5:11:15.04:166,15,0	1/1:8,10:18:33.08:359,33,0	1/1:5,8:13:21.06:232,21,0	1/1:4,15:19:12.79:351,13,0	1/1:2,13:15:36.10:398,36,0	1/1:1,11:12:30.08:332,30,0	1/1:2,10:12:27.07:299,27,0	1/1:2,15:17:39.11:432,39,0	0/0:14,0:13:29.99:0,30,260	0/0:6,0:6:14.99:0,15,130	0/1:4,9:13:16:294,0,16	0/1:3,11:14:18.92:266,0,19	1/1:3,10:13:0.95:224,1,0	0/1:2,9:11:1.97:208,0,2	0/1:4,7:11:4.99:178,0,5	1/1:1,8:9:24.06:266,24,0	1/1:1,10:11:24.06:265,24,0	1/1:4,13:17:33.09:365,33,0	0/1:7,14:21:0.97:446,0,1	1/1:1,6:7:12:120,12,0
chr10	30162648	.	GT	G	11417.72	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-2.880;DP=694;FS=5.550;HRun=11;HaplotypeScore=95.6388;InbreedingCoeff=0.8021;MQ=70.52;MQ0=3;MQRankSum=-2.687;QD=17.90;ReadPosRankSum=4.385;VQSLOD=5.4327;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,38:45:48.93:804,49,0	1/1:0,9:9:20.83:172,21,0	0/0:33,0:20:18.10:0,18,230	0/0:23,0:15:14.99:0,15,130	1/1:5,30:35:83.88:690,84,0	1/1:4,21:26:58.96:474,59,0	1/1:3,23:26:68.91:566,69,0	1/1:11,17:28:46.86:373,47,0	1/1:1,18:19:41.95:345,42,0	1/1:4,21:25:62.88:511,63,0	1/1:5,11:16:9.37:242,9,0	1/1:4,21:25:50.92:419,51,0	1/1:1,20:21:56.93:468,57,0	1/1:2,16:18:38.94:320,39,0	1/1:2,30:32:71.90:591,72,0	1/1:3,22:26:49.88:400,50,0	1/1:4,31:35:68.89:566,69,0	1/1:1,18:19:47.94:394,48,0	1/1:5,15:20:13.28:313,13,0	1/1:5,20:25:59.46:471,59,0	1/1:2,15:17:6.96:264,7,0	1/1:3,21:24:12.87:307,13,0	1/1:4,20:24:53.93:443,54,0	1/1:1,31:32:83.90:690,84,0	1/1:2,15:17:41.93:345,42,0	1/1:8,21:29:62.87:514,63,0	1/1:6,24:31:64.80:523,65,0	1/1:3,11:14:0.97:214,1,0
chr10	30163200	.	CA	C	7487.74	PASS	AB=0.816;AC=52;AF=0.929;AN=56;BaseQRankSum=-3.131;DP=450;FS=3.279;HRun=10;HaplotypeScore=63.6665;InbreedingCoeff=0.3601;MQ=73.61;MQ0=4;MQRankSum=-1.463;QD=17.54;ReadPosRankSum=2.680;VQSLOD=5.7740;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,15:16:38.99:338,39,0	1/1:4,4:8:20.99:182,21,0	0/0:22,1:9:6.35:0,6,80	0/1:22,0:16:8.43:8,0,139	1/1:4,14:19:44.03:371,44,0	1/1:5,10:15:5.67:210,6,0	1/1:3,11:14:35.96:309,36,0	1/1:9,11:20:47.97:417,48,0	0/1:5,7:12:9.19:158,0,9	1/1:2,12:14:35.95:312,36,0	1/1:6,14:20:20.73:409,21,0	1/1:1,3:4:6:52,6,0	1/1:7,9:16:35.95:312,36,0	1/1:7,9:16:41.96:361,42,0	1/1:6,10:16:11.78:324,12,0	1/1:5,11:16:38.98:338,39,0	1/1:29,0:29:43.90:291,44,0	1/1:37,0:37:67.26:396,67,0	1/1:7,10:17:38.98:338,39,0	1/1:12,12:24:29.53:466,30,0	1/1:0,2:2:6:52,6,0	1/1:6,5:11:23.94:199,24,0	1/1:2,8:10:29.99:260,30,0	1/1:5,5:10:17.99:157,18,0	1/1:8,9:17:41.98:364,42,0	1/1:8,9:17:35.13:291,35,0	1/1:5,10:15:38.98:338,39,0	1/1:3,7:10:26.99:233,27,0
chr10	30163244	.	GA	G	851.79	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=4.149;DP=594;FS=13.416;HRun=10;HaplotypeScore=113.1356;InbreedingCoeff=0.8004;MQ=74.56;MQ0=11;MQRankSum=-2.097;QD=16.07;ReadPosRankSum=1.406;VQSLOD=2.8035;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:39.10:0,39,429	0/0:8,0:8:21.04:0,21,223	0/0:66,2:30:26.37:0,26,250	0/0:85,1:36:32.19:0,32,207	0/0:26,0:26:60.16:0,60,664	0/0:20,1:22:27.92:0,28,508	0/0:15,0:16:29.88:0,30,294	0/0:31,0:30:69.04:0,69,730	0/0:11,0:11:24.05:0,24,257	0/0:17,0:17:45.12:0,45,495	0/0:25,0:26:67.43:0,67,672	0/0:5,0:5:9.02:0,9,100	0/0:17,0:17:38.83:0,39,398	0/0:11,0:11:24.05:0,24,258	0/0:15,0:15:36.08:0,36,389	0/0:14,0:15:38.94:0,39,412	1/1:8,10:19:4.63:257,5,0	1/1:5,29:34:56.59:705,57,0	0/0:20,0:20:54.14:0,54,590	0/0:17,1:19:27.95:0,28,518	0/0:1,0:1:3.01:0,3,33	0/0:6,0:6:15.03:0,15,158	0/0:16,0:16:45.12:0,45,496	0/0:6,0:6:14.98:0,15,144	0/0:20,0:21:50.04:0,50,572	0/0:25,0:25:61.38:0,61,731	0/0:20,1:21:25.08:0,25,502	0/0:13,0:13:36.08:0,36,388
chr10	30163276	.	TAA	T	6424.79	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-8.458;DP=559;FS=16.051;HRun=14;HaplotypeScore=101.5139;InbreedingCoeff=0.9438;MQ=80.65;MQ0=6;MQRankSum=0.893;QD=16.31;ReadPosRankSum=3.722;VQSLOD=2.3497;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,5:13:17.64:150,18,0	1/1:2,4:6:11.98:111,12,0	0/0:64,0:31:35.71:0,36,391	0/0:64,0:32:24.84:0,25,195	1/1:4,20:26:62.42:551,62,0	1/1:4,20:25:50.45:440,50,0	1/1:2,9:12:20.66:178,21,0	1/1:7,13:21:38.89:361,39,0	1/1:1,8:9:21:194,21,0	1/1:8,7:15:20.83:194,21,0	1/1:10,15:25:35.75:329,36,0	1/1:1,7:8:18:166,18,0	1/1:4,12:17:29.72:260,30,0	1/1:5,12:18:26.57:220,27,0	1/1:2,16:19:44.74:400,45,0	1/1:3,11:15:23.72:206,24,0	0/0:8,0:19:27.06:0,27,292	0/0:10,0:17:39.08:0,39,425	1/1:10,10:20:29.90:276,30,0	1/1:7,9:17:23.56:206,24,0	1/1:2,0:2:6.01:55,6,0	1/1:2,6:8:17.97:167,18,0	1/1:5,7:14:17.53:197,18,0	1/1:2,6:8:15:139,15,0	1/1:9,16:25:41.85:388,42,0	1/1:9,17:28:50.53:447,51,0	1/1:8,19:28:53.65:483,54,0	1/1:4,11:15:32.97:305,33,0
chr10	30164209	.	AT	A	1118.07	PASS	AB=0.914;AC=6;AF=0.107;AN=56;BaseQRankSum=8.265;DP=532;FS=6.965;HRun=10;HaplotypeScore=52.7347;InbreedingCoeff=0.6616;MQ=72.12;MQ0=0;MQRankSum=-1.211;QD=12.02;ReadPosRankSum=1.087;VQSLOD=2.7265;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:75.20:0,75,829	0/0:7,0:7:21.06:0,21,232	0/0:13,0:12:20.41:0,20,245	0/1:13,1:14:0.86:1,0,154	0/0:25,1:26:49.10:0,49,745	0/0:16,0:16:48.12:0,48,524	0/0:15,1:16:13.05:0,13,372	0/0:13,0:14:33.09:0,33,365	0/0:14,0:14:27.07:0,27,299	0/0:21,0:21:51.12:0,51,552	0/0:12,0:12:10.25:0,10,339	0/0:25,0:25:36.96:0,37,598	0/0:20,0:20:54.15:0,54,597	0/0:20,1:21:27.76:0,28,516	0/0:21,0:21:57.13:0,57,610	0/0:15,0:15:42.10:0,42,456	1/1:5,33:38:59.79:748,60,0	1/1:3,21:24:29.81:488,30,0	0/0:25,0:25:66.17:0,66,717	0/0:19,0:19:42.11:0,42,465	0/0:22,0:22:54.15:0,54,597	0/0:14,0:14:39.10:0,39,424	0/1:14,2:17:7.16:7,0,367	0/0:24,0:24:63.16:0,63,690	0/0:20,0:20:60.15:0,60,655	0/0:18,0:18:48.13:0,48,531	0/0:26,0:26:69.19:0,69,763	0/0:2,0:2:6.02:0,6,66
chr10	30164464	.	A	AC	4486.91	PASS	AB=0.675;AC=36;AF=0.643;AN=56;BaseQRankSum=-3.221;DP=389;FS=1.278;HRun=9;HaplotypeScore=49.5676;InbreedingCoeff=-0.3944;MQ=80.42;MQ0=2;MQRankSum=-1.457;QD=12.26;ReadPosRankSum=-0.368;VQSLOD=3.8267;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:7,14:21:48.08:202,0,48	1/1:0,5:5:12.03:132,12,0	0/0:22,0:18:5.36:0,5,226	0/1:17,0:16:37.25:37,0,85	1/1:5,15:20:13.05:371,13,0	0/1:6,12:18:40.02:262,0,40	0/1:1,10:11:1.99:208,0,2	0/1:13,12:25:42.10:240,0,42	0/1:8,5:13:5:173,0,5	0/1:9,8:17:51.08:161,0,51	1/1:1,10:11:21.02:219,21,0	1/1:4,7:11:24.06:259,24,0	0/1:4,10:14:1.99:208,0,2	1/1:3,5:8:12.03:133,12,0	1/1:2,4:6:9.02:100,9,0	0/1:10,6:16:48.07:201,0,48	1/1:4,0:19:25.36:124,25,0	0/1:18,2:25:25.98:238,0,26	0/1:5,5:10:11.13:96,0,11	0/1:4,4:9:17.03:57,0,17	1/1:0,6:6:8.94:83,9,0	1/1:0,6:6:9.02:100,9,0	0/1:5,4:9:60.03:78,0,60	0/1:9,16:25:26.74:408,0,27	0/1:6,9:15:31.61:32,0,86	0/1:8,3:11:14.02:87,0,14	0/1:4,9:13:25.01:205,0,25	0/1:2,2:4:14.05:73,0,14
chr10	30164619	.	A	AT	1105.85	PASS	AB=0.900;AC=5;AF=0.089;AN=56;BaseQRankSum=-5.756;DP=496;FS=0.000;HRun=9;HaplotypeScore=49.3048;InbreedingCoeff=0.7701;MQ=76.01;MQ0=0;MQRankSum=-1.691;QD=18.74;ReadPosRankSum=1.781;VQSLOD=3.7799;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:59.97:0,60,516	0/0:7,0:7:14.99:0,15,130	0/0:18,0:17:34.78:0,35,278	0/1:8,0:9:18.97:19,0,40	0/0:28,0:29:79.97:0,80,679	0/0:21,0:21:62.94:0,63,537	0/0:11,0:11:29.98:0,30,256	0/0:22,0:22:53.94:0,54,461	0/0:15,0:15:38.99:0,39,339	0/0:22,0:22:62.99:0,63,547	0/0:20,0:20:50.95:0,51,437	0/0:10,0:10:20.96:0,21,174	0/0:23,0:23:62.99:0,63,547	0/0:11,0:11:26.97:0,27,231	0/0:14,0:14:32.99:0,33,286	0/0:12,0:12:35.99:0,36,312	1/1:2,23:26:66.01:711,66,0	1/1:5,19:24:25.08:505,25,0	0/0:19,0:19:50.99:0,51,443	0/0:33,0:33:89.98:0,90,781	0/0:9,0:9:23.99:0,24,208	0/0:12,0:12:29.99:0,30,260	0/0:19,0:19:50.99:0,51,443	0/0:9,0:9:17.99:0,18,156	0/0:12,0:12:35.99:0,36,313	0/0:29,0:29:74.97:0,75,647	0/0:28,0:27:80.98:0,81,703	0/0:10,0:10:26.96:0,27,230
chr10	30165030	.	A	AT	20750.38	PASS	AB=0.767;AC=54;AF=0.964;AN=56;BaseQRankSum=-3.551;DP=566;FS=5.599;HRun=1;HaplotypeScore=102.7995;InbreedingCoeff=-0.0372;MQ=71.99;MQ0=1;MQRankSum=0.827;QD=36.66;ReadPosRankSum=3.213;VQSLOD=4.9562;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,20:21:57.19:854,57,0	1/1:0,9:9:27.09:405,27,0	0/1:13,8:17:99:285,0,114	0/1:12,4:10:59.72:110,0,60	1/1:2,31:33:78.69:1145,79,0	1/1:0,28:28:66.19:965,66,0	1/1:0,14:14:33.08:470,33,0	1/1:7,30:37:90.29:1314,90,0	1/1:2,16:18:51.16:745,51,0	1/1:3,13:16:39.13:577,39,0	1/1:3,13:16:36.10:540,36,0	1/1:2,26:28:75.25:1123,75,0	1/1:2,15:17:39.13:583,39,0	1/1:3,26:29:81.23:1188,81,0	1/1:0,19:19:54.18:809,54,0	1/1:1,18:19:48.16:709,48,0	1/1:2,18:20:54.18:809,54,0	1/1:1,16:17:45.15:674,45,0	1/1:1,12:13:36.12:537,36,0	1/1:0,18:18:42.04:604,42,0	1/1:2,9:11:24.08:360,24,0	1/1:0,14:14:42.14:629,42,0	1/1:0,18:18:51.13:739,51,0	1/1:0,27:27:72.24:1079,72,0	1/1:1,26:27:78.26:1155,78,0	1/1:1,13:14:39.11:546,39,0	1/1:2,33:35:93.32:1394,93,0	1/1:0,10:10:27.09:404,27,0
chr10	30166010	.	TTTTC	T	4003.10	PASS	AB=1.000;AC=31;AF=0.554;AN=56;BaseQRankSum=-11.599;DP=513;FS=45.589;HRun=0;HaplotypeScore=136.4814;InbreedingCoeff=-0.4159;MQ=48.76;MQ0=11;MQRankSum=6.864;QD=9.14;ReadPosRankSum=6.741;VQSLOD=1.1431;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:15,0:13:12.39:107,0,12	0/1:12,0:12:45.03:59,0,45	0/0:36,0:11:24.92:0,25,395	0/0:23,0:4:9.03:0,9,162	0/1:32,0:32:31.55:206,0,32	0/1:21,0:20:91.33:91,0,118	0/1:12,0:12:15.15:114,0,15	1/1:13,19:31:43.98:549,44,0	0/1:11,0:11:59.36:66,0,59	0/1:23,0:23:45.21:232,0,45	0/1:25,0:25:34.04:34,0,83	0/1:18,0:18:12.27:169,0,12	0/1:19,0:18:16.30:209,0,16	1/1:9,0:9:3.09:109,3,0	1/1:10,0:10:7.78:149,8,0	0/1:12,0:12:41.31:113,0,41	0/0:16,0:16:5.74:0,6,31	0/1:16,0:16:29.82:30,0,48	1/1:17,0:17:16.19:204,16,0	0/1:12,0:12:46.38:46,0,47	1/1:12,0:12:17.79:123,18,0	0/1:10,0:9:15.53:91,0,16	0/1:19,0:19:45.09:127,0,45	0/1:10,0:10:11.75:44,0,12	0/1:22,0:21:74.36:259,0,74	1/1:17,0:16:24.23:304,24,0	0/1:29,0:28:99:286,0,120	0/1:23,0:23:64.66:281,0,65
chr10	30166024	.	T	TTC	7684.34	PASS	AB=0.974;AC=49;AF=0.875;AN=56;BaseQRankSum=-2.307;DP=517;FS=7.314;HRun=0;HaplotypeScore=133.8833;InbreedingCoeff=0.4692;MQ=41.78;MQ0=19;MQRankSum=-0.064;QD=17.08;ReadPosRankSum=6.882;VQSLOD=3.8909;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:12:24:180,24,0	1/1:7,3:10:4.81:239,5,0	0/0:36,0:9:23.55:0,24,288	0/0:30,0:4:9.03:0,9,107	1/1:29,3:31:11.57:389,12,0	1/1:15,5:19:34.50:494,34,0	0/1:11,1:11:1.56:211,0,2	1/1:32,0:30:55.70:637,56,0	1/1:10,2:12:32.58:292,33,0	1/1:21,0:21:53.38:425,53,0	1/1:5,16:21:29.31:306,29,0	1/1:11,0:11:29.64:213,30,0	1/1:18,0:17:30.16:340,30,0	1/1:11,0:11:16.82:157,17,0	1/1:13,1:14:23.55:205,24,0	1/1:10,2:12:26.86:261,27,0	0/1:20,0:20:31.59:53,0,32	0/1:22,0:21:18.17:18,0,67	1/1:18,0:18:8.99:274,9,0	1/1:10,1:11:11.50:181,11,0	1/1:10,0:10:15.69:109,16,0	1/1:11,0:10:20.15:143,20,0	1/1:15,1:16:31.85:340,32,0	1/1:10,0:10:15.11:104,15,0	1/1:19,2:20:56.54:553,57,0	1/1:20,0:19:25.35:361,25,0	1/1:26,4:28:68.97:591,69,0	1/1:14,6:20:44.59:607,45,0
chr10	30166030	.	C	CTTT	5273.90	PASS	AB=0.956;AC=44;AF=0.786;AN=56;BaseQRankSum=2.715;DP=544;FS=71.608;HRun=3;HaplotypeScore=152.7854;InbreedingCoeff=0.2407;MQ=42.14;MQ0=20;MQRankSum=-3.489;QD=10.59;ReadPosRankSum=2.409;VQSLOD=-0.5058;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:11,0:10:0.55:160,0,1	1/1:11,1:12:6.34:228,6,0	0/0:38,0:8:17.23:0,17,189	0/1:33,0:5:3.94:4,0,74	1/1:29,2:29:43.41:446,43,0	1/1:16,5:21:32.25:470,32,0	0/1:12,0:11:17.47:137,0,17	1/1:31,0:29:17.98:200,18,0	1/1:11,1:12:25.28:222,25,0	1/1:21,0:21:24.08:225,24,0	0/1:21,4:25:7.68:271,0,8	1/1:12,0:12:12.11:162,12,0	1/1:18,0:17:21.48:187,21,0	0/1:12,0:12:1.69:112,0,2	1/1:13,1:14:15.68:144,16,0	1/1:12,2:14:26.70:292,27,0	1/1:5,0:21:13.64:82,14,0	1/1:14,0:27:27.53:193,28,0	1/1:19,0:19:22.77:168,23,0	1/1:14,0:14:17.64:167,18,0	0/0:8,0:8:4.30:0,4,54	1/1:10,0:9:8.21:101,8,0	0/1:17,1:17:3.23:126,0,3	0/1:9,0:9:2.42:13,0,2	1/1:24,1:25:23.70:248,24,0	1/1:22,0:20:23.36:317,23,0	1/1:28,2:28:15.77:316,16,0	0/1:17,4:21:3.98:283,0,4
chr10	30166419	.	T	TC	1497.97	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=4.185;DP=472;FS=4.798;HRun=6;HaplotypeScore=54.8818;InbreedingCoeff=0.9436;MQ=98.02;MQ0=0;MQRankSum=-3.301;QD=28.81;ReadPosRankSum=2.519;VQSLOD=4.4150;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:81.15:0,81,812	0/0:6,0:6:15.03:0,15,153	0/0:26,0:26:59.75:0,60,577	0/0:27,0:27:62.86:0,63,620	0/0:8,0:8:15.03:0,15,153	0/0:21,0:21:60.13:0,60,612	0/0:16,0:16:39.09:0,39,397	0/0:28,0:28:84.16:0,84,841	0/0:22,0:22:63.14:0,63,643	0/0:10,0:10:27.05:0,27,270	0/0:7,0:6:12.03:0,12,122	0/0:22,0:22:66.15:0,66,672	0/0:13,0:13:39.09:0,39,398	0/0:14,0:14:36.08:0,36,367	0/0:11,0:11:33.06:0,33,329	0/0:14,0:14:42.09:0,42,428	1/1:6,27:33:75.24:943,75,0	1/1:0,19:19:54.17:676,54,0	0/0:17,0:17:39.07:0,39,392	0/0:10,0:10:27.06:0,27,275	0/0:42,0:42:99:0,117,1193	0/0:6,0:6:15.03:0,15,153	0/0:7,0:7:15.03:0,15,153	0/0:16,0:16:48.09:0,48,481	0/0:6,0:5:15.03:0,15,153	0/0:19,0:19:57.09:0,57,571	0/0:10,0:10:27.06:0,27,275	0/0:9,0:9:27.02:0,27,264
chr10	30166627	.	TATAC	T	294.47	PASS	AB=1.000;AC=15;AF=0.500;AN=30;BaseQRankSum=-2.921;DP=66;FS=2.452;HRun=0;HaplotypeScore=27.9039;InbreedingCoeff=0.3618;MQ=57.22;MQ0=2;MQRankSum=-1.651;QD=11.78;ReadPosRankSum=-1.715;VQSLOD=2.2909;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:6:2.66:0,3,12	./.	./.	0/0:10,0:4:0.71:0,1,2	./.	0/0:1,0:1:0:0,0,0	0/0:2,0:2:0.47:0,0,1	1/1:9,0:9:17.69:116,18,0	0/0:2,0:2:3:0,3,26	0/0:1,0:1:0.47:0,0,1	./.	./.	./.	1/1:1,0:1:3:25,3,0	1/1:1,0:1:0.89:2,1,0	./.	1/1:3,0:3:5.95:74,6,0	1/1:1,5:6:9.03:148,9,0	1/1:1,0:1:0.47:1,0,0	./.	./.	./.	./.	./.	0/0:4,0:4:2.98:0,3,22	1/1:1,0:1:2.96:19,3,0	0/1:3,0:3:4.46:4,0,11	./.
chr10	30166637	.	T	TACAC	492.59	PASS	AB=1.000;AC=22;AF=0.647;AN=34;BaseQRankSum=-1.481;DP=74;FS=4.084;HRun=0;HaplotypeScore=36.9794;InbreedingCoeff=0.1961;MQ=67.51;MQ0=3;MQRankSum=2.435;QD=11.46;ReadPosRankSum=0.577;VQSLOD=2.1765;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,0:5:2.88:16,3,0	./.	1/1:6,0:2:0.89:2,1,0	0/0:14,0:7:2.36:0,2,20	./.	0/0:1,0:1:0.47:0,0,1	1/1:2,0:2:3.01:60,3,0	0/1:4,0:4:47.77:53,0,48	1/1:0,2:2:3.01:84,3,0	0/1:2,0:2:1.52:35,0,2	./.	./.	./.	./.	1/1:1,0:1:3.01:38,3,0	./.	0/0:5,0:5:6.78:0,7,31	0/1:6,0:6:3.69:4,0,87	1/1:1,0:1:3.01:67,3,0	1/1:1,0:1:2.99:23,3,0	./.	./.	0/1:1,0:1:0:0,0,0	./.	1/1:2,4:6:3.01:84,3,0	0/0:1,0:1:3.01:0,3,38	1/1:6,0:6:14.29:133,14,0	./.
chr10	30166658	.	ATGT	A	82.37	PASS	AB=0.750;AC=6;AF=0.188;AN=32;BaseQRankSum=-0.557;DP=101;FS=1.951;HRun=0;HaplotypeScore=49.1365;InbreedingCoeff=0.1077;MQ=84.92;MQ0=7;MQRankSum=-1.217;QD=6.34;ReadPosRankSum=1.876;VQSLOD=1.6631;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:6:5.81:0,6,91	./.	0/0:14,0:6:4.01:0,4,13	0/0:26,0:11:0.23:0,0,41	./.	0/0:1,1:2:0:0,0,0	0/0:2,0:2:3.01:0,3,71	0/0:3,0:3:9.03:0,9,142	1/1:1,0:1:1.25:3,1,0	0/1:2,1:3:42.59:43,0,100	./.	./.	./.	./.	./.	./.	1/1:2,4:6:6.02:99,6,0	0/0:5,0:5:9.03:0,9,166	0/1:2,1:2:30.60:31,0,54	0/0:1,0:1:3.01:0,3,71	./.	./.	./.	./.	0/0:6,0:6:3.01:0,3,56	0/0:1,0:1:3.01:0,3,71	0/0:8,0:8:15.05:0,15,327	0/0:5,0:5:3.01:0,3,36
chr10	30166679	.	AAT	A	2103.32	PASS	AB=0.786;AC=36;AF=0.818;AN=44;BaseQRankSum=-3.071;DP=120;FS=24.803;HRun=0;HaplotypeScore=41.6540;InbreedingCoeff=0.3828;MQ=72.48;MQ0=8;MQRankSum=-0.932;QD=27.32;ReadPosRankSum=0.780;VQSLOD=2.1082;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,6:7:18.06:233,18,0	1/1:0,2:2:6.02:73,6,0	0/1:11,0:5:3.94:4,0,24	0/0:27,0:9:4.73:0,5,37	1/1:0,5:5:12.04:155,12,0	1/1:0,1:1:3.01:39,3,0	./.	1/1:2,6:8:21.06:264,21,0	./.	0/1:1,3:4:39.05:106,0,39	./.	1/1:0,2:2:6.02:79,6,0	1/1:0,1:1:3.01:39,3,0	1/1:0,1:1:3.01:39,3,0	1/1:1,1:2:6.02:76,6,0	./.	0/0:8,0:8:21.07:0,21,348	0/0:6,0:5:9.03:0,9,153	1/1:2,4:5:8.99:118,9,0	1/1:1,1:2:6.02:79,6,0	./.	./.	1/1:0,2:2:6.02:76,6,0	1/1:0,1:1:3.01:39,3,0	1/1:0,3:3:9.03:118,9,0	1/1:0,1:1:3.01:39,3,0	1/1:0,10:10:30.10:388,30,0	1/1:3,5:8:24.04:273,24,0
chr10	30166694	.	AAT	A	2643.93	PASS	AC=44;AF=0.917;AN=48;BaseQRankSum=-2.001;DP=131;FS=23.861;HRun=0;HaplotypeScore=39.6375;InbreedingCoeff=0.3027;MQ=65.19;MQ0=8;MQRankSum=-2.346;QD=26.98;ReadPosRankSum=2.470;VQSLOD=1.8748;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,8:11:20.90:234,21,0	1/1:1,2:3:9.02:100,9,0	0/0:8,0:4:2.99:0,3,23	0/0:25,0:6:5.67:0,6,29	1/1:0,6:6:17.99:199,18,0	1/1:0,2:2:6.02:73,6,0	./.	1/1:2,7:9:24.07:285,24,0	1/1:0,2:2:3.01:37,3,0	1/1:1,4:6:14.88:161,15,0	./.	1/1:0,2:2:6.02:73,6,0	1/1:0,1:1:3.01:37,3,0	1/1:0,1:1:3.01:37,3,0	1/1:0,2:2:6.02:73,6,0	1/1:1,0:1:3.01:37,3,0	1/1:2,7:9:23.91:271,24,0	1/1:0,4:3:9.03:110,9,0	1/1:4,5:8:15.05:183,15,0	1/1:1,1:2:3.01:37,3,0	./.	./.	1/1:1,1:2:3.01:37,3,0	1/1:0,1:1:2.97:20,3,0	1/1:0,3:3:9.03:110,9,0	1/1:0,1:1:3.01:37,3,0	1/1:1,10:11:30.09:366,30,0	1/1:1,7:9:20.90:234,21,0
chr10	30167399	.	GCATT	G	832.16	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.343;DP=767;FS=3.146;HRun=0;HaplotypeScore=116.4140;InbreedingCoeff=0.9953;MQ=71.89;MQ0=0;MQRankSum=-0.263;QD=19.81;ReadPosRankSum=0.046;VQSLOD=3.5377;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,103,2314	0/0:15,0:15:27.09:0,27,642	0/0:18,0:16:21.06:0,21,306	0/0:27,0:24:30.10:0,30,610	0/0:43,0:43:99:0,114,2641	0/0:32,0:32:78.25:0,78,1772	0/0:32,0:32:87.20:0,87,1832	0/0:42,0:42:78.24:0,78,1645	0/0:35,0:35:87.27:0,87,1943	0/0:23,0:23:57.19:0,57,1307	0/0:10,0:10:27.06:0,27,567	0/0:29,0:29:78.26:0,78,1709	0/0:32,0:32:81.16:0,81,1767	0/0:34,0:34:87.27:0,87,1897	0/0:33,0:32:81.27:0,81,1826	0/0:27,0:27:66.23:0,66,1604	1/1:2,18:20:33.11:552,33,0	1/1:6,16:22:24.08:401,24,0	0/0:23,0:23:51.16:0,51,1078	0/0:29,0:29:60.19:0,60,1372	0/0:21,0:21:39.11:0,39,787	0/0:18,0:18:36.09:0,36,790	0/0:16,0:16:42.11:0,42,957	0/0:29,0:29:75.15:0,75,1598	0/0:30,0:30:75.24:0,75,1785	0/0:30,0:30:78.26:0,78,1758	0/0:39,0:37:99:0,102,2463	0/0:16,0:16:42.14:0,42,951
chr10	30167593	.	AC	A	5890.45	PASS	AB=1.000;AC=46;AF=0.821;AN=56;BaseQRankSum=9.492;DP=686;FS=11.450;HRun=8;HaplotypeScore=114.1172;InbreedingCoeff=0.6811;MQ=68.30;MQ0=13;MQRankSum=-4.355;QD=10.33;ReadPosRankSum=4.784;VQSLOD=2.3612;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:31,0:31:2.76:252,3,0	1/1:13,0:12:19.50:97,19,0	0/0:34,0:28:74.14:0,74,785	0/0:29,0:26:68.17:0,68,753	1/1:29,0:29:63.80:356,64,0	1/1:27,0:27:57.09:316,57,0	1/1:41,0:40:82.26:424,82,0	1/1:30,0:30:21.17:184,21,0	1/1:17,0:17:4.43:118,4,0	1/1:22,0:21:41.15:201,41,0	1/1:20,0:19:25.77:206,26,0	1/1:27,0:27:39.87:284,40,0	1/1:26,0:26:23.06:270,23,0	0/1:21,0:21:13.70:180,0,14	1/1:20,0:20:40.33:210,40,0	0/1:17,0:16:5.63:107,0,6	0/0:30,0:30:84.21:0,84,988	0/0:23,0:23:66.14:0,66,754	1/1:20,0:20:3.03:90,3,0	1/1:21,0:21:14.25:260,14,0	1/1:23,0:23:50.94:263,51,0	1/1:4,20:23:57.09:550,57,0	1/1:18,0:17:40.71:230,41,0	1/1:26,0:25:47.18:247,47,0	1/1:20,0:20:24.08:218,24,0	1/1:27,0:27:66.15:319,66,0	1/1:32,0:32:72.47:421,72,0	1/1:10,0:10:16.88:87,17,0
chr10	30167600	.	CCA	C	2973.66	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=10.364;DP=705;FS=4.766;HRun=0;HaplotypeScore=141.8543;InbreedingCoeff=0.9642;MQ=67.68;MQ0=13;MQRankSum=-2.208;QD=5.42;ReadPosRankSum=3.227;VQSLOD=2.8835;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:31,0:30:32.24:108,32,0	1/1:13,0:12:13.32:43,13,0	0/0:40,0:34:16:0,16,889	0/0:30,0:27:57.46:0,57,775	1/1:29,0:29:52.65:190,53,0	1/1:27,1:27:47.23:179,47,0	1/1:39,0:38:59.63:192,60,0	1/1:33,1:33:57.24:344,57,0	1/1:14,0:14:22.99:101,23,0	1/1:19,0:18:34.65:138,35,0	1/1:22,0:21:20.14:113,20,0	1/1:25,1:26:45.32:174,45,0	1/1:25,0:24:39.78:132,40,0	1/1:26,0:26:23.25:76,23,0	1/1:25,0:25:31.08:100,31,0	1/1:19,0:17:20.74:96,21,0	0/0:34,0:34:99:0,99,1369	0/0:27,0:27:39.75:0,40,915	1/1:15,1:15:22.17:125,22,0	1/1:21,0:21:24.66:161,25,0	1/1:27,0:25:36.27:128,36,0	0/0:25,0:24:51.84:0,52,278	1/1:20,0:19:31.65:112,32,0	1/1:26,0:25:30.07:96,30,0	1/1:21,0:21:32.53:130,33,0	1/1:27,0:27:40.32:141,40,0	1/1:30,0:30:59.86:244,60,0	1/1:11,0:11:6.31:29,6,0
chr10	30167601	.	CA	C	16280.46	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=3.786;DP=698;FS=24.560;HRun=1;HaplotypeScore=82.1530;InbreedingCoeff=0.9716;MQ=67.30;MQ0=13;MQRankSum=-4.934;QD=28.76;ReadPosRankSum=4.943;VQSLOD=3.2885;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,26:28:63.20:832,63,0	1/1:0,13:12:21.07:285,21,0	0/0:39,2:35:71.92:0,72,1084	0/0:30,0:27:75.53:0,76,907	1/1:0,28:29:72.14:942,72,0	1/1:2,26:27:65.70:878,66,0	1/1:0,39:38:87.29:1195,87,0	1/1:2,31:32:92.63:1012,93,0	1/1:0,13:13:32.70:419,33,0	1/1:1,18:18:51.12:656,51,0	1/1:1,21:21:34.14:615,34,0	1/1:2,23:25:68.71:901,69,0	1/1:2,22:24:40.95:773,41,0	1/1:1,24:25:17.86:529,18,0	1/1:0,25:25:42.13:585,42,0	1/1:3,16:17:11.35:417,11,0	0/0:34,0:34:99:0,99,1276	0/0:27,0:27:48.74:0,49,895	1/1:3,13:15:38.54:430,39,0	1/1:6,15:21:52.17:723,52,0	1/1:2,25:25:54.18:735,54,0	1/1:24,0:23:9.67:63,10,0	1/1:0,20:19:42.14:579,42,0	1/1:0,26:25:51.17:683,51,0	1/1:6,14:20:57.07:687,57,0	1/1:1,26:27:78.22:997,78,0	1/1:1,29:30:80.86:1085,81,0	1/1:1,10:11:20.98:260,21,0
chr10	30169872	.	TCACACACACACACA	T	440.40	PASS	AB=0.826;AC=5;AF=0.100;AN=50;BaseQRankSum=3.264;DP=560;FS=1.937;HRun=0;HaplotypeScore=189.5198;InbreedingCoeff=0.1847;MQ=56.85;MQ0=8;MQRankSum=-1.431;QD=6.67;ReadPosRankSum=-0.788;VQSLOD=2.1681;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:18:6.02:0,6,264	0/0:9,0:9:2.26:0,2,176	./.	./.	0/0:14,0:13:6.02:0,6,198	0/0:18,0:18:9.03:0,9,362	0/0:28,0:27:23.13:0,23,1003	0/0:32,0:31:36.11:0,36,1158	0/0:17,0:16:3.01:0,3,172	0/0:20,0:18:30.10:0,30,1448	0/0:15,0:15:6.02:0,6,195	0/0:23,0:23:9.03:0,9,403	0/0:15,0:15:6.02:0,6,216	0/0:27,0:27:9.03:0,9,353	0/0:19,0:19:2.94:0,3,140	0/0:22,0:22:8.02:0,8,452	1/1:17,4:20:3.01:117,3,0	0/1:15,2:19:99:412,0,191	0/0:22,0:21:20.25:0,20,787	0/0:15,0:15:2.75:0,3,178	0/0:27,0:27:9.03:0,9,311	0/0:21,0:21:9.03:0,9,329	0/0:15,0:15:6.02:0,6,235	1/1:26,0:26:0.44:2,0,0	0/0:15,0:15:9.03:0,9,476	0/0:30,0:29:45.14:0,45,2097	0/0:21,0:21:12.04:0,12,580	./.
chr10	30169882	.	A	ACACACACACACACG	4081.90	PASS	AB=1.000;AC=33;AF=0.589;AN=56;BaseQRankSum=-4.265;DP=586;FS=0.554;HRun=0;HaplotypeScore=191.8695;InbreedingCoeff=-0.1532;MQ=50.23;MQ0=17;MQRankSum=-2.079;QD=8.08;ReadPosRankSum=4.481;VQSLOD=2.4660;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:20:6.01:133,6,0	1/1:9,0:9:2.75:105,3,0	0/0:22,0:14:11.98:0,12,115	0/0:23,0:11:9.02:0,9,90	0/1:17,0:16:34.08:34,0,52	0/1:20,0:20:38.62:125,0,39	0/1:28,0:27:2.45:291,0,2	0/1:37,0:35:1.53:282,0,2	1/1:7,11:24:3.01:204,3,0	0/1:24,0:22:23.02:369,0,23	0/1:16,0:16:11.04:11,0,34	0/1:21,0:21:42.35:141,0,42	0/1:17,0:17:19.48:97,0,19	0/1:27,0:27:60.26:259,0,60	0/1:19,0:18:44.07:58,0,44	1/1:22,0:22:8.17:227,8,0	0/0:17,0:16:17.12:0,17,192	0/0:19,0:19:37.30:0,37,597	1/1:23,0:21:21.85:316,22,0	0/1:17,0:17:52.53:94,0,53	0/1:30,0:29:34.49:103,0,34	0/1:23,0:23:50.31:204,0,50	1/1:15,0:15:11.07:138,11,0	1/1:26,0:25:0.42:1,0,0	0/1:14,0:14:10.55:172,0,11	0/1:28,0:27:67.73:415,0,68	1/1:19,0:19:8.91:245,9,0	1/1:6,0:6:10.70:57,11,0
chr10	30169886	.	A	ACACACACACG	4578.21	PASS	AB=0.801;AC=33;AF=0.589;AN=56;BaseQRankSum=-6.881;DP=616;FS=3.396;HRun=0;HaplotypeScore=158.1586;InbreedingCoeff=-0.0237;MQ=50.05;MQ0=18;MQRankSum=1.707;QD=9.12;ReadPosRankSum=2.473;VQSLOD=3.6855;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:7,16:24:6.01:181,6,0	1/1:2,6:9:2.33:152,2,0	0/0:21,0:13:14.99:0,15,154	0/0:26,0:11:9.02:0,9,90	0/1:17,0:16:12.84:54,0,13	1/1:19,0:20:16.58:216,17,0	1/1:29,0:28:5.86:248,6,0	0/1:36,0:34:28.64:300,0,29	0/1:23,0:22:17.95:127,0,18	0/1:26,0:24:33.14:269,0,33	0/1:17,0:17:13.36:35,0,13	0/1:5,14:23:17.50:233,0,18	0/1:4,12:16:19.48:145,0,19	1/1:26,0:26:20.91:360,21,0	0/1:25,0:24:1.89:206,0,2	0/1:8,16:27:30.93:295,0,31	0/0:19,0:18:20.11:0,20,189	0/0:21,0:21:18.70:0,19,534	1/1:22,0:20:9.78:188,10,0	0/1:5,13:23:41.45:142,0,41	1/1:29,0:28:4.97:138,5,0	0/1:6,17:27:29.19:231,0,29	1/1:15,0:15:11.30:75,11,0	0/0:6,20:26:0.88:0,1,2	1/1:13,0:14:12:304,12,0	0/1:29,0:28:0.82:382,0,1	0/1:4,12:17:7.96:240,0,8	1/1:6,0:6:10.70:57,11,0
chr10	30169888	.	A	ACACACACG	3958.33	PASS	AB=0.944;AC=29;AF=0.518;AN=56;BaseQRankSum=-7.059;DP=622;FS=2.980;HRun=0;HaplotypeScore=151.4691;InbreedingCoeff=-0.3434;MQ=49.58;MQ0=19;MQRankSum=-0.124;QD=7.40;ReadPosRankSum=5.132;VQSLOD=2.2880;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:23:6.02:140,6,0	1/1:9,0:9:2.33:107,2,0	0/0:21,0:12:17.89:0,18,173	0/0:25,0:9:14.98:0,15,151	0/1:18,0:17:10.55:77,0,11	0/1:20,0:20:13.15:165,0,13	1/1:28,0:27:25.11:303,25,0	0/1:36,0:34:68.15:291,0,68	0/1:22,0:21:18.21:101,0,18	0/1:26,0:24:99:248,0,139	0/1:18,0:18:8.06:8,0,54	1/1:25,0:25:7.02:265,7,0	0/1:14,0:14:19.48:99,0,19	0/1:14,12:28:94.64:212,0,95	0/1:13,12:24:99:102,0,137	0/1:26,0:26:51.65:201,0,52	0/0:21,0:20:23.10:0,23,197	0/0:20,0:20:30.20:0,30,477	0/1:24,0:22:33.90:150,0,34	0/1:22,0:22:48.20:113,0,48	0/1:30,0:29:5.44:136,0,5	0/1:28,0:28:25.92:230,0,26	0/1:13,0:15:24.02:69,0,24	0/1:25,0:24:0.03:3,0,0	0/1:9,6:15:41.97:337,0,42	0/1:31,0:30:99:312,0,99	1/1:16,1:16:8.70:248,9,0	0/1:8,0:8:32.15:40,0,32
chr10	30170394	.	GTTC	G	21530.64	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-1.913;DP=619;FS=28.729;HRun=0;HaplotypeScore=141.7374;InbreedingCoeff=0.8832;MQ=79.68;MQ0=0;MQRankSum=-9.145;QD=37.58;ReadPosRankSum=5.553;VQSLOD=3.2851;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,27:27:54.18:902,54,0	1/1:0,5:5:12.04:204,12,0	0/0:19,0:17:27.18:0,27,582	0/0:26,0:26:27.17:0,27,658	1/1:0,29:29:72.12:1115,72,0	1/1:0,26:27:69.23:1153,69,0	1/1:3,16:19:41.88:673,42,0	1/1:0,26:26:75.20:1145,75,0	1/1:2,12:14:24.08:408,24,0	1/1:2,28:31:81.13:1293,81,0	1/1:2,23:25:57.20:967,57,0	1/1:1,13:14:33.11:547,33,0	1/1:0,20:20:57.20:966,57,0	1/1:0,18:19:36.12:591,36,0	1/1:1,18:19:48.16:814,48,0	1/1:0,18:18:48.16:815,48,0	1/1:31,3:36:80.25:532,80,0	1/1:12,0:12:18.75:87,19,0	1/1:1,17:19:51.15:794,51,0	1/1:1,37:40:99:1593,108,0	1/1:0,5:5:6.02:102,6,0	1/1:2,25:27:68.95:1025,69,0	1/1:1,19:20:42.04:650,42,0	1/1:1,2:3:6.02:102,6,0	1/1:1,16:19:48.14:706,48,0	1/1:0,41:42:99:1780,123,0	1/1:2,34:36:93.32:1564,93,0	1/1:0,21:21:60.20:1004,60,0
chr10	30170395	.	TTC	T	12753.05	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=1.604;DP=610;FS=26.478;HRun=0;HaplotypeScore=160.4477;InbreedingCoeff=0.8793;MQ=79.36;MQ0=0;MQRankSum=-8.975;QD=22.57;ReadPosRankSum=5.373;VQSLOD=3.3014;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:27:53.79:460,54,0	1/1:5,0:5:12:105,12,0	0/0:19,0:17:23.48:0,23,476	0/0:26,0:25:17.79:0,18,513	1/1:29,0:29:71.69:598,72,0	1/1:27,0:27:68.99:605,69,0	1/1:18,0:18:42:384,42,0	1/1:26,0:26:74.99:652,75,0	1/1:12,0:12:24:211,24,0	1/1:31,0:31:81.38:698,81,0	1/1:24,0:24:59.96:519,60,0	1/1:13,0:13:32.79:277,33,0	1/1:20,0:20:56.99:498,57,0	1/1:19,0:19:35.99:314,36,0	1/1:19,0:19:47.98:420,48,0	1/1:18,0:18:47.99:421,48,0	1/1:5,31:36:84.23:1182,84,0	1/1:0,12:12:21.07:309,21,0	1/1:19,0:19:50.99:446,51,0	1/1:39,0:39:99:877,106,0	1/1:5,0:5:6:52,6,0	1/1:26,1:27:68.65:589,69,0	1/1:19,0:19:41.91:354,42,0	1/1:3,0:3:6:53,6,0	1/1:19,0:19:47.16:377,47,0	1/1:42,0:42:99:1036,123,0	1/1:35,0:35:92.73:802,93,0	1/1:21,0:21:59.73:512,60,0
chr10	30170646	.	TCTTCCTTCCTTCCTTCCTTCCTTCCTTC	T	23683.25	PASS	AB=1.000;AC=50;AF=0.962;AN=52;BaseQRankSum=-1.728;DP=433;FS=2.887;HRun=0;HaplotypeScore=340.2738;InbreedingCoeff=-0.0487;MQ=42.45;MQ0=4;MQRankSum=0.855;QD=55.21;ReadPosRankSum=-0.429;VQSLOD=3.1247;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,16:16:9.03:458,9,0	1/1:6,0:6:18.05:356,18,0	./.	./.	1/1:8,23:31:45.05:973,45,0	1/1:17,0:17:51.15:1281,51,0	1/1:14,0:11:27.08:754,27,0	1/1:11,0:10:24.05:355,24,0	1/1:8,12:20:27.09:1199,27,0	1/1:3,27:30:66.93:1569,67,0	1/1:4,16:19:20.96:712,21,0	1/1:11,0:11:33.10:955,33,0	1/1:14,0:14:42.14:1330,42,0	1/1:12,11:23:36.12:1551,36,0	1/1:18,0:18:46.85:1002,47,0	1/1:14,0:14:39.06:942,39,0	0/1:17,0:17:99:255,0,191	0/1:13,0:12:99:117,0,220	1/1:0,11:11:33.09:1076,33,0	1/1:11,18:29:45.15:1369,45,0	1/1:4,0:4:12:215,12,0	1/1:3,12:15:8.96:205,9,0	1/1:14,9:23:39.92:1278,40,0	1/1:6,0:6:10.37:200,10,0	1/1:17,0:17:42.14:1065,42,0	1/1:2,19:21:57.20:2030,57,0	1/1:19,0:19:57.20:1891,57,0	1/1:9,0:9:18.06:547,18,0
chr10	30170649	.	TCC	T	660.41	PASS	AB=0.775;AC=17;AF=0.327;AN=52;BaseQRankSum=8.164;DP=412;FS=5.813;HRun=2;HaplotypeScore=229.8141;InbreedingCoeff=-0.4540;MQ=42.09;MQ0=6;MQRankSum=-2.659;QD=2.37;ReadPosRankSum=4.401;VQSLOD=-0.5373;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:7.75:0,8,46	0/1:1,5:6:2.04:51,0,2	./.	./.	0/0:23,8:31:11.30:0,11,183	0/1:9,8:17:19.09:19,0,168	0/0:13,0:10:25.57:0,26,165	0/0:4,0:2:2.30:0,2,15	0/1:12,8:20:21.74:108,0,22	0/1:27,3:30:99:118,0,113	0/1:17,3:19:22.93:51,0,23	0/1:9,3:12:16.48:16,0,143	0/1:10,4:14:36.68:37,0,131	0/1:11,11:22:12.25:96,0,12	0/0:14,4:18:6.98:0,7,160	0/1:9,4:13:8.93:9,0,148	0/0:14,0:14:28.35:0,28,338	0/0:13,0:12:27.63:0,28,251	0/1:11,0:11:27.45:39,0,27	0/1:18,10:28:51.03:51,0,109	0/1:4,0:4:14.51:15,0,39	0/0:12,2:14:5.27:0,5,21	0/1:9,13:22:41.38:41,0,119	0/0:5,0:5:9.56:0,10,50	0/1:9,5:14:32.99:33,0,109	0/1:19,2:21:21.77:22,0,115	0/1:13,6:19:50.47:50,0,179	0/1:3,3:6:9.26:51,0,9
chr10	30170652	.	TTCCTTCCTTCCTTCCTTCCTTC	T	19259.19	PASS	AB=0.967;AC=44;AF=0.815;AN=54;BaseQRankSum=3.068;DP=405;FS=3.610;HRun=0;HaplotypeScore=281.1106;InbreedingCoeff=0.3064;MQ=41.50;MQ0=9;MQRankSum=-1.684;QD=50.42;ReadPosRankSum=4.511;VQSLOD=3.8020;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:16:9.03:253,9,0	1/1:0,0:5:15.05:555,15,0	./.	0/0:4,0:1:3.01:0,3,159	1/1:23,8:31:4.15:792,4,0	1/1:9,1:17:9.19:1149,9,0	0/1:13,0:10:6.79:378,0,7	0/0:3,0:1:2.22:0,2,7	1/1:12,8:20:27.09:1293,27,0	1/1:27,3:30:29.66:926,30,0	0/1:17,3:19:4.13:612,0,4	1/1:9,3:12:32.85:894,33,0	1/1:10,4:14:41.13:1118,41,0	1/1:11,11:22:36.12:1712,36,0	1/1:12,0:16:31.20:617,31,0	1/1:8,0:12:14.40:669,14,0	0/1:12,0:12:37.63:38,0,297	0/0:13,0:12:5.86:0,6,479	0/1:11,0:11:5.42:574,0,5	1/1:18,10:28:37.48:1345,37,0	1/1:3,0:3:6.90:104,7,0	1/1:12,2:14:4.86:226,5,0	1/1:9,13:22:39.74:1439,40,0	1/1:4,0:4:5.95:100,6,0	1/1:8,0:13:36.41:913,36,0	1/1:19,2:21:55.40:1458,55,0	1/1:13,6:19:51.44:1487,51,0	1/1:4,0:6:18.06:605,18,0
chr10	30170697	.	TAGCTA	T	419.02	PASS	AB=0.900;AC=5;AF=0.089;AN=56;BaseQRankSum=1.330;DP=496;FS=6.512;HRun=0;HaplotypeScore=246.9352;InbreedingCoeff=0.7203;MQ=65.09;MQ0=4;MQRankSum=-3.789;QD=22.05;ReadPosRankSum=2.581;VQSLOD=2.7485;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:36.12:0,36,989	0/0:9,0:9:27.09:0,27,724	0/0:18,0:12:30.31:0,30,806	0/0:19,0:12:21.11:0,21,786	0/0:30,0:30:56.56:0,57,1684	0/0:26,0:26:72.24:0,72,2160	0/0:15,0:14:39.13:0,39,1237	0/0:26,0:24:72.25:0,72,2285	0/0:19,0:19:33.09:0,33,742	0/0:21,0:21:51.64:0,52,1474	0/0:18,0:18:30.98:0,31,839	0/0:13,0:13:38.77:0,39,1055	0/0:19,0:19:56.86:0,57,1676	0/0:22,0:22:44.79:0,45,1168	0/0:16,0:16:45.15:0,45,1400	0/0:18,0:18:51.17:0,51,1530	1/1:0,4:5:13.60:277,14,0	1/1:0,2:5:12.04:247,12,0	0/0:15,0:15:45.15:0,45,1357	0/0:25,0:25:46.64:0,47,1259	0/0:4,0:4:6.02:0,6,195	0/0:18,0:18:30.10:0,30,973	0/0:23,0:23:45.08:0,45,1153	0/1:8,0:9:15.59:16,0,632	0/0:24,0:24:69.24:0,69,2117	0/0:23,0:23:65.95:0,66,1816	0/0:27,0:27:79.51:0,80,2413	0/0:8,0:8:21.07:0,21,629
chr10	30170710	.	TC	T	208.71	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=2.295;DP=508;FS=1.146;HRun=2;HaplotypeScore=177.5730;InbreedingCoeff=0.9556;MQ=70.79;MQ0=0;MQRankSum=-4.722;QD=11.60;ReadPosRankSum=2.920;VQSLOD=2.4509;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:45.14:0,45,651	0/0:6,0:6:18.06:0,18,269	0/0:13,0:12:34.27:0,34,461	0/0:13,0:12:23.06:0,23,380	0/0:32,0:32:60.18:0,60,854	0/0:25,0:25:75.25:0,75,1102	0/0:13,0:13:39.13:0,39,583	0/0:28,0:28:81.23:0,81,1173	0/0:16,0:16:26.94:0,27,318	0/0:21,0:21:54.10:0,54,777	0/0:23,0:23:51.06:0,51,640	0/0:13,0:13:36.12:0,36,538	0/0:22,0:22:66.20:0,66,949	0/0:19,0:19:42.07:0,42,594	0/0:17,0:17:48.16:0,48,706	0/0:17,0:17:48.16:0,48,718	1/1:0,13:13:18.05:198,18,0	1/1:2,3:5:12.03:125,12,0	0/0:16,0:16:45.15:0,45,661	0/0:28,0:28:63.03:0,63,837	0/0:4,0:4:12.04:0,12,179	0/0:20,0:20:39.12:0,39,555	0/0:17,0:17:33.08:0,33,492	0/0:11,0:11:33.10:0,33,463	0/0:24,0:24:66.20:0,66,950	0/0:29,0:29:84.21:0,84,1236	0/0:28,0:28:81.16:0,81,1118	0/0:10,0:10:20.99:0,21,279
chr10	30171215	.	AAC	A	468.38	PASS	AB=0.924;AC=16;AF=0.286;AN=56;BaseQRankSum=0.696;DP=616;FS=1.460;HRun=0;HaplotypeScore=108.1584;InbreedingCoeff=-0.1637;MQ=61.26;MQ0=10;MQRankSum=1.257;QD=1.52;ReadPosRankSum=-0.579;VQSLOD=2.1209;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:24,4:27:19.61:191,20,0	0/1:15,1:15:5.63:6,0,311	0/0:19,0:16:0.47:0,0,1	0/0:21,0:13:0.47:0,0,1	0/0:13,0:18:12.03:0,12,158	0/1:24,1:26:51.95:52,0,475	0/0:25,0:25:32.97:0,33,390	0/0:25,0:25:17.69:0,18,157	0/1:18,1:19:2.63:3,0,367	0/1:26,0:26:47.72:48,0,287	0/0:24,0:25:21.04:0,21,272	0/1:15,1:16:8.67:9,0,247	0/0:23,2:24:9.21:0,9,450	0/1:19,1:20:1.52:2,0,361	0/1:15,5:20:5.66:6,0,304	0/0:29,0:29:8.50:0,8,352	0/0:20,0:22:20.88:0,21,173	0/0:19,0:20:35.93:0,36,259	0/0:13,0:12:8.90:0,9,104	0/1:13,3:16:71.27:71,0,127	0/1:24,7:30:38.37:38,0,279	0/1:22,3:25:67.37:67,0,373	0/1:22,2:24:49.47:49,0,401	0/1:21,0:21:18.99:19,0,505	0/0:28,0:28:28.68:0,29,336	0/1:15,1:16:44.20:44,0,55	0/0:36,0:35:32.46:0,32,635	0/1:4,0:2:13.75:14,0,39
chr10	30172188	.	A	AT	31914.10	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=7.836;DP=786;FS=2.018;HRun=0;HaplotypeScore=134.9612;InbreedingCoeff=0.9999;MQ=77.47;MQ0=0;MQRankSum=-5.868;QD=45.20;ReadPosRankSum=3.321;VQSLOD=4.2061;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,26:26:72.25:1150,72,0	1/1:0,11:11:30.10:479,30,0	0/0:18,0:18:51.46:0,51,619	0/0:19,0:19:48.15:0,48,652	1/1:0,45:45:99:1871,117,0	1/1:1,26:27:75.26:1199,75,0	1/1:0,27:27:78.27:1247,78,0	1/1:0,39:39:99:1870,117,0	1/1:0,20:20:57.19:911,57,0	1/1:0,32:32:93.32:1487,93,0	1/1:0,35:35:99:1631,102,0	1/1:2,21:23:63.21:1002,63,0	1/1:0,30:30:90.31:1436,90,0	1/1:0,24:24:66.23:1055,66,0	1/1:0,29:29:87.30:1391,87,0	1/1:2,22:24:63.21:1007,63,0	0/0:19,0:19:54.18:0,54,755	0/0:24,0:24:72.22:0,72,987	1/1:1,17:18:54.14:835,54,0	1/1:1,36:37:99:1679,105,0	1/1:1,38:39:99:1727,108,0	1/1:2,31:33:90.31:1439,90,0	1/1:1,29:30:81.06:1294,81,0	1/1:1,18:19:54.18:863,54,0	1/1:1,25:26:75.26:1199,75,0	1/1:0,41:41:99:1965,123,0	1/1:2,46:48:99:2265,144,0	1/1:3,20:23:57.19:911,57,0
chr10	30172944	.	C	CT	9356.51	PASS	AB=0.609;AC=51;AF=0.911;AN=56;BaseQRankSum=-7.031;DP=529;FS=10.256;HRun=10;HaplotypeScore=55.3263;InbreedingCoeff=0.6859;MQ=77.03;MQ0=4;MQRankSum=-1.778;QD=19.57;ReadPosRankSum=4.497;VQSLOD=5.2177;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,22:30:35.19:560,35,0	1/1:2,7:9:3.09:203,3,0	0/0:26,0:15:12.61:0,13,115	0/0:23,0:16:11.43:0,11,140	1/1:6,32:39:71.35:924,71,0	1/1:2,16:18:39.10:416,39,0	1/1:3,9:12:12.03:128,12,0	1/1:10,18:27:12.30:502,12,0	1/1:4,8:12:15.04:160,15,0	1/1:7,11:19:35.83:362,36,0	1/1:5,21:26:57.14:602,57,0	1/1:3,11:14:27.03:272,27,0	1/1:1,15:18:20.17:388,20,0	1/1:6,6:12:26.96:257,27,0	1/1:3,12:15:8.44:295,8,0	1/1:4,12:15:18.02:334,18,0	1/1:1,0:16:23.04:135,23,0	1/1:1,0:15:25.57:128,26,0	1/1:5,12:16:24.44:368,24,0	1/1:4,23:27:22.98:595,23,0	1/1:1,7:8:13.59:132,14,0	1/1:1,8:9:24.06:254,24,0	1/1:2,14:16:30.08:320,30,0	0/1:5,9:14:0.58:200,0,1	1/1:5,23:28:13.89:558,14,0	1/1:7,20:27:35.93:598,36,0	1/1:3,22:25:35.45:570,35,0	1/1:1,7:8:9.02:96,9,0
chr10	30173988	.	A	AACACACACACAC	15878.82	PASS	AC=46;AF=0.852;AN=54;BaseQRankSum=-4.768;DP=407;FS=2.769;HRun=0;HaplotypeScore=153.2501;InbreedingCoeff=0.6364;MQ=53.97;MQ0=5;MQRankSum=-0.765;QD=45.76;ReadPosRankSum=2.043;VQSLOD=4.8109;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:14:6.02:112,6,0	1/1:6,3:10:18.06:901,18,0	0/0:21,0:13:2.98:0,3,21	0/0:15,0:12:21.07:0,21,551	1/1:17,3:22:15.05:816,15,0	1/1:20,4:25:27.95:1374,28,0	1/1:5,0:5:3.01:175,3,0	1/1:33,0:33:45.15:1810,45,0	1/1:11,1:12:12:624,12,0	1/1:9,0:9:9.03:366,9,0	1/1:16,2:19:6.02:344,6,0	1/1:12,1:14:5.80:346,6,0	1/1:3,1:4:3.01:175,3,0	1/1:12,1:13:15.05:766,15,0	1/1:12,3:16:21.07:1127,21,0	1/1:9,3:14:14.08:703,14,0	0/0:9,0:15:15.05:0,15,437	0/0:2,0:5:5.85:0,6,98	1/1:18,0:16:23.44:1043,23,0	1/1:4,3:9:8.33:465,8,0	1/1:17,0:17:8.99:323,9,0	1/1:11,1:12:14.33:809,14,0	1/1:11,1:12:2.93:172,3,0	1/1:11,3:14:12.04:626,12,0	1/1:16,4:23:17.36:1165,17,0	1/1:12,0:12:30.10:1232,30,0	1/1:17,0:17:11.95:405,12,0	./.
chr10	30175381	.	A	ACAGGAG	47935.88	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-8.253;DP=665;FS=5.317;HRun=0;HaplotypeScore=126.2118;InbreedingCoeff=0.9927;MQ=46.44;MQ0=2;MQRankSum=-14.529;QD=88.28;ReadPosRankSum=1.000;VQSLOD=6.6583;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,24:32:78.07:2716,78,0	1/1:1,7:8:24.08:876,24,0	0/0:30,0:29:71.72:0,72,1527	0/0:32,0:30:87.28:0,87,2041	1/1:6,16:23:45.15:1616,45,0	1/1:9,26:40:99:3635,102,0	1/1:14,16:32:87.30:2989,87,0	1/1:17,13:32:81.26:2700,81,0	1/1:4,18:25:66.23:2364,66,0	1/1:4,15:20:54.17:1854,54,0	1/1:8,22:30:75.26:2644,75,0	1/1:5,18:25:63.22:2293,63,0	1/1:4,17:22:63.22:2291,63,0	1/1:8,14:24:63.21:2075,63,0	1/1:7,17:25:69.24:2422,69,0	1/1:6,9:16:45.15:1564,45,0	0/0:26,0:26:78.21:0,78,1859	0/0:34,0:34:99:0,102,2491	1/1:9,8:14:42.14:1484,42,0	1/1:4,16:20:60.21:2177,60,0	1/1:7,6:16:21.07:687,21,0	1/1:7,11:20:39.13:1351,39,0	1/1:5,19:25:60.20:2172,60,0	1/1:1,8:10:21.07:765,21,0	1/1:3,12:15:42.14:1531,42,0	1/1:9,20:32:90.31:3098,90,0	1/1:5,16:22:60.21:2095,60,0	1/1:1,4:8:15.05:538,15,0
chr10	30175821	.	C	CATCTATCT	7085.15	PASS	AB=1.000;AC=51;AF=0.981;AN=52;DP=822;FS=0.000;HRun=0;HaplotypeScore=336.9611;InbreedingCoeff=0.1339;MQ=55.99;MQ0=11;QD=9.06;VQSLOD=2.2865;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:38,0:37:20.54:204,21,0	1/1:16,0:16:9.03:157,9,0	./.	./.	1/1:35,0:35:5.51:101,6,0	1/1:37,0:35:17.12:274,17,0	1/1:16,0:14:16.17:219,16,0	1/1:76,0:66:99:1792,113,0	1/1:27,0:26:14.01:140,14,0	1/1:39,0:36:56.32:743,56,0	1/1:32,0:31:8.52:132,9,0	1/1:35,0:35:17.65:359,18,0	1/1:50,0:50:19.35:244,19,0	0/1:33,0:32:0.01:0,0,0	1/1:41,0:40:5.26:27,5,0	1/1:25,0:25:9:106,9,0	1/1:20,0:21:18.02:349,18,0	1/1:10,4:15:3.01:122,3,0	1/1:18,0:18:15.91:217,16,0	1/1:35,0:34:10.92:128,11,0	1/1:17,0:17:5.51:76,6,0	1/1:23,0:23:8.99:158,9,0	1/1:33,0:32:5.87:35,6,0	1/1:10,0:10:8.29:143,8,0	1/1:32,0:32:8.33:136,8,0	1/1:31,0:30:47.70:622,48,0	1/1:39,0:38:39.10:551,39,0	1/1:8,0:8:3.01:47,3,0
chr10	30175850	.	A	ATC	3594.42	PASS	AB=0.786;AC=24;AF=0.429;AN=56;BaseQRankSum=4.165;DP=786;FS=1.379;HRun=0;HaplotypeScore=253.2188;InbreedingCoeff=-0.7517;MQ=50.67;MQ0=12;MQRankSum=0.103;QD=5.03;ReadPosRankSum=0.895;VQSLOD=2.6708;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:33,5:37:99:228,0,135	0/1:16,2:18:21.87:22,0,288	0/0:18,0:13:33.09:0,33,436	0/0:12,0:5:12.04:0,12,171	0/1:20,16:36:31.25:31,0,270	0/1:27,5:30:99:137,0,339	0/1:9,4:11:79.01:147,0,79	0/1:70,5:65:99:164,0,1708	0/1:18,8:25:99:202,0,185	0/1:28,12:37:99:595,0,661	0/1:16,12:28:41.47:41,0,156	0/1:15,14:29:99:194,0,110	0/1:25,17:44:99:280,0,277	0/1:19,7:25:94.72:95,0,150	0/1:20,17:36:27.84:28,0,309	0/1:13,10:23:20.75:21,0,315	0/0:25,0:25:34.01:0,34,458	0/0:17,0:17:23.22:0,23,427	0/1:17,2:17:99:107,0,271	0/1:24,8:31:99:285,0,281	0/1:12,4:16:36.28:36,0,170	0/1:20,5:25:73.70:74,0,381	0/1:12,14:25:37.08:37,0,185	0/1:14,1:15:33.92:34,0,226	0/1:31,10:41:99:118,0,476	0/1:18,10:27:99:413,0,470	0/1:24,12:35:99:286,0,591	0/1:8,2:10:17.93:18,0,299
chr10	30176171	.	T	TA	22752.88	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-12.832;DP=751;FS=0.000;HRun=4;HaplotypeScore=68.5022;InbreedingCoeff=0.9977;MQ=93.03;MQ0=0;MQRankSum=-9.037;QD=35.77;ReadPosRankSum=4.563;VQSLOD=4.8996;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,42:44:99:1682,123,0	1/1:3,14:17:39.13:532,39,0	0/0:40,0:40:99:0,103,1131	0/0:27,0:26:64.91:0,65,686	1/1:2,31:33:84.24:1128,84,0	1/1:1,14:15:42.13:560,42,0	1/1:3,19:22:60.19:802,60,0	1/1:4,29:32:87.28:1173,87,0	1/1:2,24:26:63.21:862,63,0	1/1:0,27:27:78.26:1066,78,0	1/1:1,23:24:69.23:943,69,0	1/1:2,22:24:66.22:903,66,0	1/1:2,23:26:69.23:941,69,0	1/1:2,27:29:78.26:1067,78,0	1/1:1,33:34:87.29:1190,87,0	1/1:5,28:33:75.06:1026,75,0	0/0:37,0:37:99:0,108,1224	0/0:11,0:11:33.09:0,33,374	1/1:0,18:18:50.84:682,51,0	1/1:2,21:23:57.16:759,57,0	1/1:1,42:43:99:1600,117,0	1/1:2,21:23:51.17:697,51,0	1/1:0,20:20:51.17:682,51,0	1/1:2,28:30:72.24:985,72,0	1/1:2,26:28:75.25:1026,75,0	1/1:1,20:21:60.19:806,60,0	1/1:0,37:37:99:1395,102,0	1/1:0,6:6:18.06:246,18,0
chr10	30176587	.	GT	G	12656.79	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=5.300;DP=670;FS=5.531;HRun=10;HaplotypeScore=85.0585;InbreedingCoeff=0.9934;MQ=80.13;MQ0=0;MQRankSum=-4.559;QD=21.64;ReadPosRankSum=3.217;VQSLOD=5.6793;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,27:27:71.99:625,72,0	1/1:1,11:12:32.93:279,33,0	0/0:17,0:16:35.75:0,36,315	0/0:19,0:20:21.86:0,22,227	1/1:4,33:38:82.09:797,82,0	1/1:3,25:28:56.99:495,57,0	1/1:0,17:17:47.99:417,48,0	1/1:4,21:25:29.74:477,30,0	1/1:5,11:16:26.99:234,27,0	1/1:4,23:27:68.89:582,69,0	1/1:1,33:34:98.85:849,99,0	1/1:1,15:16:41.98:365,42,0	1/1:4,30:34:77.96:677,78,0	1/1:1,22:23:62.98:547,63,0	1/1:6,37:43:99:937,108,0	1/1:1,21:22:59.98:521,60,0	0/0:27,0:28:68.24:0,68,790	0/0:20,0:20:51.11:0,51,551	1/1:5,20:25:59.14:490,59,0	1/1:2,37:39:99:869,102,0	1/1:3,10:13:23.99:208,24,0	1/1:0,12:12:35.99:312,36,0	1/1:0,22:22:50.86:442,51,0	1/1:2,18:20:47.99:417,48,0	1/1:4,20:24:59.94:514,60,0	1/1:1,30:31:89.87:767,90,0	1/1:1,30:31:71.04:706,71,0	1/1:0,6:6:15:130,15,0
chr10	30177288	.	G	GA	18009.38	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-7.305;DP=625;FS=8.399;HRun=7;HaplotypeScore=51.5831;InbreedingCoeff=0.9944;MQ=79.63;MQ0=0;MQRankSum=-7.564;QD=30.27;ReadPosRankSum=3.706;VQSLOD=5.0498;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,26:28:75.23:905,75,0	1/1:0,6:6:18.01:201,18,0	0/0:16,0:16:35.88:0,36,335	0/0:14,0:14:26.22:0,26,282	1/1:4,24:28:60.14:708,60,0	1/1:5,28:33:49.27:877,49,0	1/1:3,20:23:31.21:660,31,0	1/1:3,27:30:84.14:940,84,0	1/1:1,14:15:36.11:435,36,0	1/1:2,23:25:66.20:796,66,0	1/1:2,16:18:45.14:544,45,0	1/1:3,21:24:54.17:652,54,0	1/1:1,15:16:45.14:544,45,0	1/1:3,16:19:39.12:471,39,0	1/1:3,33:36:96.29:1158,96,0	1/1:1,14:15:39.12:471,39,0	1/1:4,24:28:72.22:870,72,0	1/1:1,15:16:39.12:471,39,0	1/1:5,16:21:51.14:602,51,0	1/1:0,27:27:75.20:890,75,0	1/1:1,30:31:81.25:979,81,0	1/1:1,13:14:30.09:362,30,0	1/1:1,14:16:39.12:471,39,0	1/1:0,26:26:66.20:797,66,0	1/1:5,25:30:72.21:858,72,0	1/1:3,25:28:75.22:896,75,0	1/1:2,27:29:81.25:979,81,0	1/1:0,13:13:39.12:471,39,0
chr10	30178985	.	AG	A	12095.23	PASS	AB=0.829;AC=53;AF=0.946;AN=56;BaseQRankSum=-1.668;DP=566;FS=3.228;HRun=9;HaplotypeScore=88.4467;InbreedingCoeff=-0.0549;MQ=74.16;MQ0=0;MQRankSum=-3.340;QD=21.37;ReadPosRankSum=5.402;VQSLOD=5.1569;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,18:24:53.96:485,54,0	0/1:1,8:9:7.60:193,0,8	0/1:21,1:21:22.11:22,0,163	0/1:10,0:10:35.54:36,0,73	1/1:4,23:27:68.94:620,69,0	1/1:1,23:24:66.04:604,66,0	1/1:0,20:20:54.03:494,54,0	1/1:9,20:29:54:494,54,0	1/1:1,16:17:42.02:384,42,0	1/1:2,13:15:39.02:357,39,0	1/1:2,15:17:45.02:412,45,0	1/1:4,15:19:45.02:412,45,0	1/1:1,14:15:45.02:412,45,0	1/1:2,17:19:45.02:412,45,0	1/1:5,22:27:63.03:577,63,0	1/1:2,30:32:87.05:796,87,0	1/1:3,19:21:48.02:439,48,0	1/1:2,19:21:49.33:487,49,0	1/1:2,16:18:48.02:436,48,0	1/1:5,18:23:49.08:532,49,0	1/1:3,13:16:5:270,5,0	1/1:1,14:15:33.01:302,33,0	1/1:4,13:17:41.69:368,42,0	1/1:0,18:18:42.02:384,42,0	1/1:3,21:24:63.03:576,63,0	1/1:3,25:29:77.06:688,77,0	1/1:4,26:30:84.04:767,84,0	1/1:2,5:7:15:137,15,0
chr10	30184161	.	G	GGA	770.27	PASS	AB=0.959;AC=18;AF=0.333;AN=54;BaseQRankSum=2.453;DP=394;FS=18.085;HRun=0;HaplotypeScore=108.8387;InbreedingCoeff=-0.3307;MQ=34.23;MQ0=53;MQRankSum=-0.309;QD=3.45;ReadPosRankSum=0.084;VQSLOD=1.0038;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:16:11.20:0,11,122	0/0:4,0:4:0.47:0,0,1	0/1:14,0:2:0:0,0,0	./.	0/1:13,0:11:16.82:17,0,18	0/1:11,1:10:47.88:48,0,59	0/1:20,0:17:99:111,0,113	0/0:28,0:26:39.27:0,39,615	0/1:11,0:9:54.29:54,0,113	0/1:9,0:8:66.17:66,0,174	0/1:8,0:7:37.58:99,0,38	0/1:8,0:8:1.74:2,0,108	0/0:8,1:9:2.63:0,3,99	0/1:14,0:13:8.31:80,0,8	0/1:6,1:6:32.98:77,0,33	0/0:10,0:9:5.21:0,5,163	0/0:18,0:16:28.33:0,28,374	0/0:14,0:11:23.66:0,24,294	0/0:11,0:9:22.88:0,23,271	0/1:12,1:13:72.36:72,0,161	0/1:17,0:16:10.95:11,0,163	0/1:15,0:14:33.65:43,0,34	0/0:9,0:9:7.37:0,7,66	1/1:25,0:18:0.45:1,0,0	0/1:12,1:12:57.76:58,0,83	0/1:7,6:10:67.22:143,0,67	0/0:22,0:17:19.81:0,20,298	0/1:11,0:5:29.47:29,0,39
chr10	30184164	.	A	AAAAC	120.70	PASS	AB=0.976;AC=8;AF=0.148;AN=54;BaseQRankSum=4.039;DP=388;FS=2.030;HRun=0;HaplotypeScore=111.7702;InbreedingCoeff=-0.0275;MQ=32.77;MQ0=58;MQRankSum=-2.631;QD=1.18;ReadPosRankSum=-1.581;VQSLOD=1.8284;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:20,0:15:2.98:3,0,120	0/0:3,0:3:0.39:0,0,1	0/0:21,0:3:2.99:0,3,36	./.	0/0:12,0:10:0.01:0,0,56	0/0:13,1:12:4.14:0,4,94	0/1:16,0:13:11.98:12,0,160	0/0:27,0:25:62.52:0,63,905	0/0:10,0:8:18.97:0,19,211	0/1:8,0:7:67.63:68,0,174	0/0:8,0:7:6.75:0,7,60	0/0:7,0:7:14.81:0,15,148	0/0:7,1:8:3.49:0,3,189	0/0:11,0:10:4:0,4,11	0/1:5,1:5:12.29:12,0,52	0/0:10,0:9:11.13:0,11,186	0/0:18,0:16:30.55:0,31,521	0/0:14,0:11:23.97:0,24,380	0/0:9,0:7:21.07:0,21,357	0/0:12,1:13:21.26:0,21,332	0/0:17,0:16:18.32:0,18,277	0/1:14,0:13:6.78:7,0,54	0/0:9,0:9:12.74:0,13,160	1/1:23,0:16:1.17:3,1,0	0/0:11,0:10:13.08:0,13,115	0/1:15,0:12:99:126,0,111	0/0:20,0:15:11.73:0,12,385	0/0:10,0:5:8.15:0,8,106
chr10	30184166	.	A	AAAAC	635.43	PASS	AB=0.976;AC=17;AF=0.315;AN=54;BaseQRankSum=3.486;DP=375;FS=4.585;HRun=0;HaplotypeScore=98.4332;InbreedingCoeff=-0.1455;MQ=32.37;MQ0=62;MQRankSum=-2.779;QD=3.78;ReadPosRankSum=-4.415;VQSLOD=-0.0688;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:17,1:13:7.26:0,7,118	0/0:2,0:2:0.47:0,0,1	0/0:26,0:3:5.97:0,6,44	./.	0/1:11,0:9:15.11:15,0,55	0/1:12,1:11:22.26:22,0,101	0/1:14,0:11:71.28:71,0,137	0/0:22,0:22:55.41:0,55,844	0/1:9,1:8:17.41:17,0,165	0/1:8,0:7:99:129,0,188	0/1:8,0:7:43.75:47,0,44	0/0:6,0:6:7.53:0,8,96	0/1:8,0:8:32.74:33,0,141	1/1:10,0:9:2.81:20,3,0	1/1:6,0:5:14.48:116,14,0	0/1:10,0:9:6.09:6,0,125	0/0:17,0:15:30.06:0,30,495	0/0:13,0:10:23.52:0,24,357	0/0:9,0:7:21.06:0,21,343	0/1:13,0:13:43.31:43,0,283	0/0:17,0:16:8.22:0,8,249	0/0:8,4:11:5.61:0,6,72	0/0:7,0:7:10.01:0,10,128	0/1:23,0:16:0.13:0,0,3	0/1:10,0:10:25.79:26,0,71	0/1:12,0:11:99:230,0,139	0/0:19,0:14:28.40:0,28,359	0/1:10,0:5:10.95:11,0,108
chr10	30184168	.	A	AAAAC	49.18	PASS	AB=0.969;AC=9;AF=0.161;AN=56;BaseQRankSum=5.769;DP=380;FS=3.200;HRun=0;HaplotypeScore=97.7076;InbreedingCoeff=-0.1551;MQ=32.18;MQ0=62;MQRankSum=-1.171;QD=0.46;ReadPosRankSum=-1.922;VQSLOD=1.6855;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:11,6:13:10.95:11,0,106	0/0:2,0:2:0.47:0,0,1	0/0:31,0:3:5.98:0,6,51	0/0:45,0:2:3.01:0,3,44	0/0:10,0:9:1.62:0,2,60	0/0:12,0:11:7.22:0,7,134	0/1:16,0:13:5.32:5,0,129	0/0:22,0:22:53.88:0,54,852	0/0:9,0:7:14.62:0,15,203	0/1:8,0:7:45.99:46,0,229	0/0:8,0:7:0.19:0,0,47	0/0:6,0:6:8.44:0,8,105	0/1:8,0:8:17.60:18,0,164	0/0:8,0:7:0.07:0,0,0	0/1:6,0:5:13.04:13,0,15	0/1:9,0:8:1.33:1,0,95	0/0:15,0:13:24.08:0,24,462	0/0:13,0:10:23.26:0,23,338	0/0:9,0:7:20.89:0,21,317	0/0:13,0:13:19.84:0,20,310	0/0:17,0:16:13.13:0,13,231	0/0:12,0:11:5.81:0,6,75	0/0:7,0:7:10.06:0,10,138	0/0:24,0:17:1.88:0,2,26	0/1:11,0:10:4.92:5,0,61	0/1:13,0:11:43.31:43,0,184	0/1:17,0:13:26.56:27,0,252	0/0:10,0:5:5.78:0,6,114
chr10	30184189	.	GGA	G	82.46	PASS	AB=0.871;AC=6;AF=0.107;AN=56;BaseQRankSum=3.040;DP=368;FS=1.244;HRun=0;HaplotypeScore=71.5005;InbreedingCoeff=0.0434;MQ=34.73;MQ0=65;MQRankSum=-1.695;QD=2.06;ReadPosRankSum=0.554;VQSLOD=0.8929;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:7,1:5:9.33:0,9,85	0/0:2,1:3:6.02:0,6,73	0/0:76,0:13:20.47:0,20,350	0/0:87,0:8:13.98:0,14,133	0/0:5,0:4:6.02:0,6,99	0/0:7,0:7:18:0,18,206	0/0:11,0:9:22.02:0,22,243	0/0:17,0:17:48.12:0,48,716	0/0:7,0:6:11.97:0,12,134	0/1:5,3:8:88.96:89,0,153	0/0:7,0:6:9.50:0,9,124	1/1:3,2:4:6.46:60,6,0	0/0:4,0:4:10.17:0,10,85	0/0:3,0:3:3.01:0,3,39	0/0:2,0:2:3.01:0,3,52	0/0:5,0:5:5.03:0,5,40	0/0:11,1:10:14.82:0,15,229	0/1:9,2:10:14.73:15,0,247	0/0:6,0:5:11.94:0,12,146	0/0:9,0:8:23.95:0,24,264	0/0:14,2:15:26.70:0,27,278	0/0:6,0:6:2.97:0,3,36	0/0:6,0:6:2.51:0,3,46	0/0:14,2:12:7.64:0,8,57	0/0:6,1:5:6.41:0,6,50	0/1:6,0:4:9.24:9,0,59	0/1:9,1:9:26.69:27,0,124	0/0:8,0:7:12.04:0,12,162
chr10	30184194	.	AAAAT	A	180.34	PASS	AB=0.952;AC=9;AF=0.161;AN=56;BaseQRankSum=1.374;DP=370;FS=3.590;HRun=0;HaplotypeScore=78.7619;InbreedingCoeff=-0.1076;MQ=35.45;MQ0=57;MQRankSum=0.723;QD=2.69;ReadPosRankSum=-1.427;VQSLOD=1.5325;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:7,1:5:10.12:0,10,88	0/0:3,0:3:6.02:0,6,79	0/0:76,0:13:31.64:0,32,474	0/0:87,0:8:0.18:0,0,79	0/0:4,0:4:6.02:0,6,94	0/0:7,0:7:18:0,18,234	0/1:12,0:11:19.89:20,0,306	0/0:17,0:17:44.75:0,45,677	0/1:7,0:7:7.33:7,0,158	0/1:8,1:9:99:101,0,223	0/0:6,0:6:8.72:0,9,96	1/1:4,1:4:1.65:52,2,0	0/0:4,0:4:12.04:0,12,171	0/0:4,0:4:3.01:0,3,40	0/0:2,0:2:3.01:0,3,63	0/1:6,0:6:23.57:24,0,43	0/0:10,1:10:14.06:0,14,446	0/1:10,2:11:27.47:27,0,517	0/0:6,0:5:6.79:0,7,168	0/0:9,0:8:23.94:0,24,272	0/0:16,2:17:23.54:0,24,246	0/0:5,0:5:5.91:0,6,85	0/0:6,0:6:11.37:0,11,72	0/0:13,2:12:13.03:0,13,85	0/0:7,0:6:11.02:0,11,52	0/1:6,0:5:40.22:40,0,107	0/1:9,1:9:39.43:39,0,206	0/0:8,0:7:12.04:0,12,230
chr10	30184666	.	TCC	T	5214.83	PASS	AB=0.717;AC=48;AF=0.857;AN=56;BaseQRankSum=-4.353;DP=361;FS=21.302;HRun=12;HaplotypeScore=64.0625;InbreedingCoeff=0.3290;MQ=79.59;MQ0=2;MQRankSum=-1.718;QD=14.99;ReadPosRankSum=4.124;VQSLOD=1.8089;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,14:22:23.99:244,24,0	1/1:1,1:2:3:30,3,0	0/1:22,0:18:14.83:15,0,192	0/0:11,0:10:16.28:0,16,129	1/1:2,7:9:18.04:183,18,0	1/1:6,10:15:27.01:274,27,0	1/1:4,7:11:18.02:183,18,0	0/1:18,10:28:2.49:162,0,2	1/1:4,9:13:18:183,18,0	0/1:1,6:7:4:162,0,4	0/0:0,1:1:0:0,0,0	1/1:2,7:9:18.02:183,18,0	1/1:4,6:10:21.02:213,21,0	1/1:4,10:14:27.03:275,27,0	1/1:5,6:12:14.95:142,15,0	0/1:4,9:13:0.20:190,0,0	1/1:4,13:18:35.79:347,36,0	1/1:7,8:15:21.01:211,21,0	1/1:8,13:22:47.54:450,48,0	1/1:2,5:7:12.01:122,12,0	1/1:9,12:21:26.96:274,27,0	1/1:1,8:9:21.02:213,21,0	1/1:2,5:7:15.03:152,15,0	1/1:6,18:23:42.06:427,42,0	1/1:3,4:6:12.02:122,12,0	1/1:6,4:10:11.97:122,12,0	1/1:3,8:11:18.03:183,18,0	1/1:2,7:9:15.03:153,15,0
chr10	30184861	.	AC	A	1525.50	PASS	AB=0.948;AC=46;AF=0.958;AN=48;BaseQRankSum=-5.138;DP=115;FS=33.105;HRun=6;HaplotypeScore=24.6049;InbreedingCoeff=-0.1644;MQ=123.66;MQ0=2;MQRankSum=-3.505;QD=13.27;ReadPosRankSum=-1.438;VQSLOD=0.4120;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,6:7:9.02:97,9,0	./.	0/1:23,3:19:74.99:75,0,260	0/1:21,0:11:23.79:24,0,62	1/1:1,1:2:3.01:32,3,0	1/1:0,5:5:15.04:161,15,0	1/1:0,7:7:15.04:161,15,0	1/1:0,9:9:21.01:201,21,0	1/1:0,2:2:3.01:32,3,0	1/1:0,2:2:6.02:64,6,0	./.	1/1:0,2:2:6.02:64,6,0	1/1:0,1:1:3.01:32,3,0	1/1:0,2:2:6.02:64,6,0	1/1:1,0:1:3:26,3,0	1/1:1,0:1:3.01:32,3,0	1/1:0,4:4:9.02:97,9,0	1/1:3,1:4:8.96:74,9,0	1/1:2,1:3:2.49:32,2,0	1/1:0,1:1:3.01:32,3,0	1/1:1,5:6:9.02:97,9,0	1/1:0,1:1:3.01:32,3,0	1/1:1,1:2:6.02:64,6,0	1/1:0,2:2:3.01:32,3,0	1/1:0,1:1:3.01:32,3,0	./.	1/1:0,3:3:6.02:64,6,0	./.
chr10	30189783	.	TG	T	3435.08	PASS	AB=0.974;AC=45;AF=0.804;AN=56;BaseQRankSum=3.359;DP=526;FS=11.364;HRun=2;HaplotypeScore=175.3095;InbreedingCoeff=0.6177;MQ=52.22;MQ0=6;MQRankSum=-2.257;QD=7.70;ReadPosRankSum=0.085;VQSLOD=-0.2389;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:24:24.74:238,25,0	1/1:7,0:7:3.77:51,4,0	0/0:21,0:17:5.94:0,6,332	0/0:17,0:11:21.06:0,21,268	1/1:33,1:34:7.40:173,7,0	1/1:14,0:14:6.30:48,6,0	0/1:11,1:12:0.48:45,0,0	1/1:31,0:28:11.38:209,11,0	1/1:13,0:13:13.72:91,14,0	1/1:18,0:18:33.77:189,34,0	1/1:14,2:16:22.68:120,23,0	1/1:10,0:10:10.74:95,11,0	1/1:16,3:18:23.03:151,23,0	1/1:16,1:17:15.47:158,15,0	1/1:22,0:20:12.93:102,13,0	1/1:12,1:13:16.01:104,16,0	0/0:24,0:24:42.07:0,42,559	0/0:18,0:17:26.90:0,27,404	1/1:21,2:19:37.25:295,37,0	1/1:28,0:28:23.72:195,24,0	1/1:13,0:11:12.23:110,12,0	1/1:18,2:19:23.87:242,24,0	1/1:18,1:19:24.26:193,24,0	0/1:9,0:9:1.05:50,0,1	1/1:28,1:29:32.31:184,32,0	0/1:27,0:28:7.18:191,0,7	1/1:21,0:20:17.59:158,18,0	1/1:6,0:6:6.08:43,6,0
chr10	30189784	.	G	GTT	4255.23	PASS	AB=1.000;AC=47;AF=0.839;AN=56;BaseQRankSum=6.652;DP=604;FS=4.718;HRun=1;HaplotypeScore=267.9090;InbreedingCoeff=0.8570;MQ=49.36;MQ0=8;MQRankSum=-7.593;QD=8.12;ReadPosRankSum=1.782;VQSLOD=1.4809;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:27:26.11:169,26,0	1/1:10,1:11:23.88:162,24,0	0/0:20,0:16:32.80:0,33,491	0/0:18,0:11:21.07:0,21,321	1/1:42,0:43:39.06:261,39,0	1/1:16,1:17:27.12:160,27,0	1/1:14,0:14:11.36:87,11,0	1/1:35,1:31:39.55:266,40,0	1/1:17,0:17:28.30:156,28,0	1/1:21,0:21:21.66:165,22,0	1/1:21,0:21:24.88:205,25,0	1/1:10,0:10:16.26:74,16,0	1/1:19,0:18:14.04:134,14,0	0/1:18,0:17:4.92:23,0,5	1/1:26,0:24:39.28:193,39,0	1/1:12,0:12:17.62:69,18,0	0/0:24,0:24:42.03:0,42,546	0/0:18,0:17:37.92:0,38,513	1/1:26,0:22:44.19:275,44,0	1/1:32,1:33:34.64:273,35,0	1/1:13,0:11:17.59:145,18,0	1/1:21,0:20:27.75:168,28,0	1/1:22,1:23:33.40:236,33,0	1/1:11,0:10:8.51:94,9,0	1/1:36,1:36:41.62:305,42,0	1/1:34,0:34:24.38:348,24,0	1/1:23,0:22:23.18:174,23,0	1/1:11,0:11:21.21:112,21,0
chr10	30189790	.	T	TG	665.99	PASS	AB=0.845;AC=15;AF=0.268;AN=56;BaseQRankSum=0.002;DP=633;FS=14.926;HRun=0;HaplotypeScore=239.9332;InbreedingCoeff=-0.3962;MQ=44.17;MQ0=11;MQRankSum=-4.620;QD=1.75;ReadPosRankSum=-4.088;VQSLOD=0.4923;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,3:25:0.14:0,0,339	0/1:4,5:9:65.31:65,0,93	0/0:20,0:15:38.11:0,38,386	0/0:19,0:8:8.87:0,9,155	0/1:35,9:44:55.31:55,0,682	0/1:17,2:19:21.85:22,0,410	0/1:12,3:15:54.14:54,0,213	0/0:34,4:33:19.09:0,19,625	0/1:14,4:18:33.47:33,0,293	0/1:19,3:22:53.49:53,0,94	0/1:16,5:22:82.98:83,0,98	0/0:11,0:11:15.01:0,15,250	0/0:20,0:19:50.55:0,51,457	0/0:17,2:18:12.34:0,12,383	0/1:31,2:31:16.44:16,0,502	0/0:12,0:12:27.49:0,27,280	0/0:25,0:25:41.62:0,42,523	0/0:18,0:17:33.36:0,33,388	0/1:28,3:26:99:119,0,238	0/1:26,6:32:59.04:59,0,474	0/0:10,0:9:15.84:0,16,157	0/0:22,0:21:18.03:0,18,353	0/1:20,3:23:27.28:27,0,347	0/0:11,2:12:6.73:0,7,176	0/1:31,7:37:42.97:43,0,665	0/1:29,5:34:60.16:60,0,647	0/1:25,2:24:36.72:37,0,434	0/1:8,5:12:92.07:92,0,119
chr10	30189796	.	T	TG	3611.17	PASS	AB=0.973;AC=39;AF=0.696;AN=56;BaseQRankSum=-0.240;DP=626;FS=0.936;HRun=0;HaplotypeScore=234.5291;InbreedingCoeff=0.3464;MQ=44.65;MQ0=13;MQRankSum=-2.829;QD=6.92;ReadPosRankSum=-4.206;VQSLOD=2.5904;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:20:16.26:131,16,0	1/1:8,0:9:15.52:102,16,0	0/0:22,0:16:41.36:0,41,382	0/0:20,0:8:2.87:0,3,93	1/1:38,2:41:32.51:348,33,0	1/1:19,0:20:8.28:78,8,0	1/1:15,0:15:11.76:112,12,0	1/1:33,0:27:7.53:99,8,0	0/1:19,0:19:20.97:57,0,21	1/1:14,10:25:62.15:608,62,0	1/1:15,8:24:16.18:409,16,0	0/1:10,0:10:4.93:5,0,18	0/0:19,0:18:4.79:0,5,45	0/1:17,1:17:40.18:40,0,60	1/1:31,2:31:3.83:110,4,0	0/1:10,0:10:0.78:1,0,6	0/0:25,0:25:39.86:0,40,225	0/0:16,0:16:6.91:0,7,161	1/1:30,3:28:51.71:343,52,0	1/1:29,1:31:6.85:164,7,0	1/1:13,0:11:5.89:36,6,0	1/1:17,2:18:3.99:126,4,0	1/1:21,1:23:17.06:183,17,0	0/1:13,0:12:5.94:6,0,19	1/1:35,2:37:13.78:220,14,0	1/1:34,1:35:19.51:232,20,0	0/1:26,0:23:39.27:48,0,39	0/1:11,2:12:6.64:152,0,7
chr10	30189801	.	TG	T	2394.02	PASS	AB=0.989;AC=36;AF=0.643;AN=56;BaseQRankSum=7.803;DP=644;FS=3.624;HRun=1;HaplotypeScore=229.6735;InbreedingCoeff=-0.4022;MQ=47.00;MQ0=15;MQRankSum=-1.627;QD=3.87;ReadPosRankSum=8.998;VQSLOD=-0.1556;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:22:35.19:35,0,38	0/1:10,0:10:6.12:29,0,6	0/0:25,0:16:13.91:0,14,174	0/1:25,1:10:5.57:6,0,33	0/1:41,0:41:59.06:152,0,59	0/1:19,1:20:33.34:90,0,33	0/1:15,0:15:20.53:48,0,21	0/1:31,0:25:23.89:24,0,119	1/1:19,0:19:3.48:78,3,0	1/1:25,0:25:0.13:95,0,0	1/1:27,0:27:8.79:160,9,0	0/1:12,0:12:0.98:39,0,1	0/1:20,0:19:13.01:75,0,13	0/1:17,1:17:14.44:91,0,14	1/1:34,0:32:1.85:105,2,0	1/1:12,0:12:5.81:34,6,0	1/1:19,5:24:41.55:354,42,0	1/1:16,2:17:10.21:189,10,0	0/1:34,1:29:10.56:190,0,11	0/1:30,0:30:23.13:95,0,23	0/1:13,0:11:17.94:18,0,34	0/1:20,0:19:1.91:88,0,2	1/1:19,1:20:19.35:90,19,0	0/1:11,0:10:17.28:24,0,17	0/1:39,0:38:18.57:111,0,19	0/1:34,0:34:39.13:134,0,39	0/1:28,1:26:19.29:106,0,19	1/1:13,0:12:8.06:88,8,0
chr10	30189802	.	GT	G	4598.21	PASS	AB=0.841;AC=45;AF=0.804;AN=56;BaseQRankSum=3.046;DP=643;FS=20.515;HRun=12;HaplotypeScore=223.2448;InbreedingCoeff=-0.0122;MQ=45.77;MQ0=16;MQRankSum=-2.922;QD=7.44;ReadPosRankSum=-0.300;VQSLOD=0.5341;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:17,7:23:1.67:188,0,2	1/1:8,2:10:19.07:124,19,0	0/0:25,0:15:13.99:0,14,106	0/1:26,0:10:1.93:2,0,14	1/1:24,17:41:47.70:425,48,0	1/1:11,8:19:27.95:220,28,0	1/1:8,7:15:3.46:94,3,0	0/1:23,7:24:31.63:107,0,32	1/1:13,6:19:7.47:155,7,0	0/1:17,8:25:1.44:149,0,1	1/1:20,7:27:10.87:162,11,0	1/1:7,5:12:10.10:107,10,0	0/1:13,7:19:3.76:149,0,4	0/1:11,8:18:12.99:153,0,13	1/1:22,12:32:48.08:323,48,0	1/1:6,6:12:23.47:151,23,0	0/1:21,0:21:20.30:46,0,20	0/1:18,0:17:15.07:15,0,68	0/1:27,8:29:24.20:213,0,24	1/1:19,12:31:14:263,14,0	1/1:8,4:10:9.37:65,9,0	1/1:12,8:19:3.16:171,3,0	1/1:11,9:20:35.20:261,35,0	1/1:9,3:11:0.70:61,1,0	1/1:21,18:38:38.26:397,38,0	1/1:16,17:34:11.39:331,11,0	1/1:19,8:25:0.26:197,0,0	1/1:12,1:12:2.26:69,2,0
chr10	30189807	.	T	TG	4736.96	PASS	AB=0.969;AC=35;AF=0.625;AN=56;BaseQRankSum=7.284;DP=620;FS=65.205;HRun=0;HaplotypeScore=211.8835;InbreedingCoeff=-0.0399;MQ=45.30;MQ0=17;MQRankSum=-3.703;QD=9.13;ReadPosRankSum=1.014;VQSLOD=2.3409;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:23:25.40:152,0,25	1/1:8,1:9:21.49:115,21,0	0/0:27,0:14:27.31:0,27,269	0/0:32,0:11:4.37:0,4,73	1/1:36,1:37:1.43:352,1,0	1/1:16,1:17:23.53:220,24,0	1/1:13,0:13:0.53:87,1,0	0/1:24,1:19:69.97:98,0,70	0/1:15,3:18:16.74:191,0,17	0/1:24,0:24:3.70:232,0,4	0/1:23,0:24:4.14:124,0,4	0/1:10,1:11:14.85:77,0,15	0/1:17,2:18:40.39:223,0,40	0/1:21,0:20:7.07:187,0,7	1/1:31,2:31:17.29:315,17,0	1/1:12,0:12:26.64:226,27,0	0/0:22,0:22:43.83:0,44,404	0/0:20,0:19:24.83:0,25,315	0/1:30,0:25:7.05:259,0,7	1/1:28,1:29:26.23:258,26,0	0/1:11,0:9:18.20:79,0,18	0/1:21,0:20:8.33:152,0,8	1/1:20,1:21:0.01:177,0,0	0/1:13,0:12:23.55:24,0,29	1/1:36,1:36:48.54:522,49,0	1/1:30,0:30:27.37:396,27,0	1/1:28,0:25:9.06:242,9,0	0/1:12,0:11:21.98:29,0,22
chr10	30189809	.	T	TTTTG	6473.56	PASS	AB=0.978;AC=37;AF=0.661;AN=56;BaseQRankSum=5.978;DP=630;FS=10.681;HRun=0;HaplotypeScore=241.6571;InbreedingCoeff=0.1178;MQ=45.59;MQ0=17;MQRankSum=-3.448;QD=12.26;ReadPosRankSum=4.606;VQSLOD=2.9576;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:25:38.93:248,0,39	1/1:8,1:9:24.31:226,24,0	0/0:26,0:14:22.15:0,22,266	0/0:33,0:11:7.56:0,8,92	1/1:37,0:37:9.57:480,10,0	1/1:16,1:17:44.75:376,45,0	1/1:13,0:13:9.55:168,10,0	0/1:27,0:21:53.32:97,0,53	0/1:18,0:18:1.93:233,0,2	1/1:25,0:25:2.85:200,3,0	0/1:25,0:26:7.57:265,0,8	0/1:9,1:11:5.13:105,0,5	0/1:18,1:18:40.79:171,0,41	0/1:21,0:20:72.15:177,0,72	1/1:34,0:32:28.58:420,29,0	1/1:12,0:12:24.49:248,24,0	0/0:23,0:23:7.51:0,8,156	0/0:20,0:19:27.85:0,28,187	0/1:29,0:25:16.39:402,0,16	1/1:27,1:28:15.34:386,15,0	0/1:11,0:9:0.24:135,0,0	1/1:21,0:20:14.57:282,15,0	1/1:21,1:22:6.05:342,6,0	0/1:13,0:12:18.37:20,0,18	1/1:37,1:37:45.59:648,46,0	1/1:31,0:31:30:479,30,0	0/1:28,0:25:30.39:271,0,30	1/1:12,0:11:13.35:93,13,0
chr10	30189813	.	TTG	T	4923.80	PASS	AB=0.940;AC=51;AF=0.911;AN=56;BaseQRankSum=-5.034;DP=607;FS=26.821;HRun=0;HaplotypeScore=211.9507;InbreedingCoeff=0.2029;MQ=45.18;MQ0=17;MQRankSum=0.884;QD=8.49;ReadPosRankSum=-0.357;VQSLOD=2.8742;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:22,2:23:33.09:246,33,0	1/1:9,0:9:19.76:126,20,0	0/0:27,0:14:4.87:0,5,177	0/1:32,0:12:17.31:17,0,104	1/1:32,2:34:27.15:309,27,0	1/1:14,2:16:28.50:172,29,0	0/1:10,2:12:1.07:55,0,1	1/1:24,0:19:27.25:212,27,0	1/1:16,0:16:6.85:141,7,0	1/1:26,1:27:2.91:333,3,0	0/1:26,1:27:47.50:220,0,47	1/1:11,0:11:12.44:85,12,0	1/1:20,0:19:16.79:165,17,0	1/1:19,1:19:15.04:158,15,0	1/1:32,0:30:20.25:154,20,0	1/1:12,0:12:11:57,11,0	1/1:22,0:22:31.04:179,31,0	1/1:19,0:18:3.19:134,3,0	1/1:29,0:25:53.23:292,53,0	1/1:23,2:25:34.87:303,35,0	1/1:11,0:9:10.14:65,10,0	1/1:21,1:21:25.25:194,25,0	1/1:21,0:21:28.24:246,28,0	1/1:12,0:11:17.49:128,17,0	1/1:34,2:35:37.88:281,38,0	1/1:27,2:29:21.73:240,22,0	1/1:26,0:23:31.49:252,31,0	1/1:12,0:11:21.96:162,22,0
chr10	30189814	.	TG	T	8014.88	PASS	AB=0.949;AC=54;AF=0.964;AN=56;BaseQRankSum=-2.015;DP=603;FS=6.048;HRun=1;HaplotypeScore=193.7838;InbreedingCoeff=0.0471;MQ=45.36;MQ0=15;MQRankSum=-1.697;QD=13.29;ReadPosRankSum=3.061;VQSLOD=4.3117;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,4:22:52.48:348,52,0	1/1:3,6:9:25.82:237,26,0	0/1:24,2:14:15.73:16,0,135	0/1:31,1:12:11.63:12,0,101	1/1:24,10:34:76.81:539,77,0	1/1:14,2:16:40.71:278,41,0	1/1:11,1:12:20.28:110,20,0	1/1:21,4:20:42.65:308,43,0	1/1:12,4:16:33.52:278,34,0	1/1:12,15:27:39.63:486,40,0	1/1:12,15:27:18.79:325,19,0	1/1:11,0:11:23.94:153,24,0	1/1:20,0:19:49.55:301,50,0	1/1:19,0:18:38.42:270,38,0	1/1:17,14:30:53.77:351,54,0	1/1:7,5:12:24.82:154,25,0	1/1:22,0:22:44.53:290,45,0	1/1:17,1:18:21.16:204,21,0	1/1:19,9:24:58.66:425,59,0	1/1:17,8:25:51.50:396,52,0	1/1:10,0:9:18.56:95,19,0	1/1:13,9:21:43.29:279,43,0	1/1:15,7:22:55.48:428,55,0	1/1:11,1:11:22.10:158,22,0	1/1:25,11:35:71.44:470,71,0	1/1:26,4:30:60:459,60,0	1/1:23,3:23:58.25:428,58,0	1/1:7,5:11:22.94:219,23,0
chr10	30189815	.	G	GTTTTTT	9438.18	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=1.023;DP=610;FS=0.000;HRun=12;HaplotypeScore=241.5398;InbreedingCoeff=0.9504;MQ=45.33;MQ0=15;MQRankSum=-4.089;QD=17.07;ReadPosRankSum=2.971;VQSLOD=0.6813;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:24:53.44:463,53,0	1/1:8,0:9:24.42:317,24,0	0/0:27,0:14:10.96:0,11,266	0/0:30,0:12:18.50:0,18,152	1/1:34,0:34:60.01:624,60,0	1/1:16,1:17:32.60:373,33,0	1/1:12,0:12:23.59:199,24,0	1/1:25,0:20:34.58:305,35,0	1/1:16,0:16:36.45:299,36,0	1/1:27,0:27:68.89:591,69,0	1/1:26,0:27:54.48:487,54,0	1/1:11,0:11:19.56:175,20,0	1/1:20,0:19:34.86:373,35,0	1/1:19,0:18:36.18:264,36,0	1/1:31,0:30:61.19:428,61,0	1/1:12,0:12:26.36:190,26,0	1/1:22,0:22:27.19:217,27,0	1/1:21,0:21:16.01:141,16,0	1/1:28,0:24:54.05:529,54,0	1/1:25,1:26:46.66:482,47,0	1/1:10,0:9:18.71:112,19,0	1/1:22,0:21:44.41:377,44,0	1/1:21,1:22:56.49:521,56,0	1/1:12,0:11:15.72:102,16,0	1/1:35,1:35:74.07:648,74,0	1/1:30,0:30:56.45:455,56,0	1/1:27,0:24:55.86:540,56,0	1/1:12,0:11:20.95:228,21,0
chr10	30189819	.	T	TTG	5210.64	PASS	AB=0.786;AC=24;AF=0.429;AN=56;BaseQRankSum=7.890;DP=627;FS=37.708;HRun=0;HaplotypeScore=213.1566;InbreedingCoeff=-0.6191;MQ=46.08;MQ0=14;MQRankSum=-7.963;QD=10.18;ReadPosRankSum=-0.798;VQSLOD=2.9559;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:17,8:24:99:245,0,264	0/1:8,2:10:64.61:65,0,83	0/0:27,0:14:32.04:0,32,373	0/0:31,0:13:25.81:0,26,280	0/1:23,13:36:99:341,0,176	0/1:12,4:16:11.47:218,0,11	1/1:9,2:11:1.94:147,2,0	0/1:24,1:20:34.03:34,0,170	0/1:9,6:16:87.28:237,0,87	0/1:20,7:27:99:197,0,254	0/1:21,6:27:99:213,0,148	0/1:8,3:11:55.01:94,0,55	0/1:16,4:20:99:217,0,139	0/1:14,5:18:99:228,0,114	0/1:19,13:31:73.63:426,0,74	0/1:6,7:13:44.69:266,0,45	0/0:22,0:22:51.60:0,52,316	0/0:23,0:23:48.58:0,49,331	0/1:24,4:24:99:213,0,165	0/1:20,6:26:99:203,0,143	0/1:6,5:10:25.73:197,0,26	0/1:16,6:22:99:164,0,155	0/1:19,7:26:99:238,0,236	0/1:11,1:11:1.08:1,0,73	0/1:22,14:35:99:523,0,104	0/1:21,12:33:99:544,0,155	0/1:23,6:26:99:199,0,256	0/0:12,0:11:6.74:0,7,73
chr10	30193916	.	C	CG	52.70	PASS	AB=0.750;AC=9;AF=0.409;AN=22;BaseQRankSum=3.891;DP=133;FS=10.302;HRun=0;HaplotypeScore=27.0977;InbreedingCoeff=0.4726;MQ=102.04;MQ0=12;MQRankSum=-3.150;QD=3.51;ReadPosRankSum=-3.878;VQSLOD=0.1505;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:15,0:13:39.12:0,39,527	0/0:26,0:24:70.99:0,71,905	./.	1/1:1,2:2:3.01:30,3,0	./.	0/0:3,0:3:3.01:0,3,42	0/1:2,1:3:21.66:22,0,75	1/1:2,3:3:5.95:55,6,0	1/1:0,2:2:5.27:20,5,0	./.	./.	1/1:0,2:2:3:29,3,0	./.	./.	0/0:28,0:27:75.24:0,75,1026	0/0:31,0:30:87.29:0,87,1216	./.	./.	./.	0/0:2,0:1:3.01:0,3,30	./.	./.	./.	./.	./.	./.
chr10	30213932	.	C	CTA	27412.05	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-3.608;DP=792;FS=5.358;HRun=0;HaplotypeScore=133.9140;InbreedingCoeff=0.9790;MQ=88.54;MQ0=1;MQRankSum=-7.545;QD=39.79;ReadPosRankSum=2.908;VQSLOD=6.4407;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,51:54:99:2260,129,0	1/1:1,7:8:15.05:263,15,0	0/0:31,0:31:55.02:0,55,746	0/0:28,0:28:63.13:0,63,799	1/1:4,24:29:54.18:929,54,0	1/1:5,20:24:51.17:894,51,0	1/1:7,25:33:69.24:1209,69,0	1/1:11,38:52:99:1923,117,0	1/1:2,22:24:63.22:1105,63,0	1/1:4,27:31:78.26:1338,78,0	1/1:4,26:30:66.23:1155,66,0	1/1:3,20:23:51.17:894,51,0	1/1:3,30:34:75.19:1314,75,0	1/1:2,35:37:99:1784,102,0	1/1:2,34:37:90.31:1578,90,0	1/1:4,18:22:51.17:894,51,0	0/0:36,0:36:99:0,105,1384	0/0:8,0:8:24.08:0,24,324	1/1:3,27:32:84.25:1395,84,0	1/1:4,25:31:66.23:1154,66,0	1/1:4,32:37:75.21:1315,75,0	1/1:1,29:29:72.25:1262,72,0	1/1:2,16:18:39.13:683,39,0	1/1:2,18:21:42.14:736,42,0	1/1:3,13:16:36.12:631,36,0	1/1:6,29:36:90.29:1540,90,0	1/1:3,21:24:57.20:999,57,0	1/1:2,3:5:9.03:158,9,0
chr10	30214802	.	AGG	A	17093.09	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-6.987;DP=619;FS=26.223;HRun=9;HaplotypeScore=81.0887;InbreedingCoeff=0.9873;MQ=73.86;MQ0=4;MQRankSum=-6.028;QD=29.47;ReadPosRankSum=4.981;VQSLOD=3.3144;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,18:20:48.14:557,48,0	1/1:0,6:6:18.05:209,18,0	0/0:19,0:18:39.13:0,39,588	0/0:18,0:19:39.05:0,39,504	1/1:0,28:28:78.23:907,78,0	1/1:1,36:36:99:1188,102,0	1/1:2,14:16:36.09:420,36,0	1/1:6,18:24:54.14:617,54,0	1/1:1,18:17:45.13:524,45,0	1/1:0,26:26:78.23:908,78,0	1/1:4,20:24:60.17:699,60,0	1/1:1,17:18:51.15:594,51,0	1/1:1,35:36:99:1153,99,0	1/1:2,23:25:63.18:734,63,0	1/1:2,23:25:69.20:804,69,0	1/1:1,19:19:54.16:629,54,0	1/1:4,25:29:66.18:769,66,0	1/1:0,12:12:33.10:385,33,0	1/1:1,16:17:42.10:477,42,0	1/1:3,23:26:66.16:751,66,0	1/1:1,24:25:60.18:699,60,0	1/1:1,16:17:42.12:489,42,0	1/1:3,11:14:33.09:385,33,0	1/1:2,18:20:48.14:559,48,0	1/1:6,21:27:57.15:664,57,0	1/1:5,25:30:78.20:888,78,0	1/1:5,26:30:78.22:909,78,0	1/1:2,6:8:15.03:175,15,0
chr10	30217610	.	C	CT	1079.84	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-7.794;DP=736;FS=5.574;HRun=6;HaplotypeScore=70.5474;InbreedingCoeff=0.9815;MQ=73.43;MQ0=1;MQRankSum=-0.792;QD=27.69;ReadPosRankSum=1.827;VQSLOD=4.3816;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,111,1095	0/0:9,0:9:27.06:0,27,275	0/0:11,1:12:22.82:0,23,212	0/0:21,0:20:43.42:0,43,400	0/0:42,0:42:99:0,114,1156	0/0:27,0:27:75.17:0,75,765	0/0:31,0:31:84.17:0,84,850	0/0:24,0:24:54.12:0,54,551	0/0:24,0:24:63.14:0,63,643	0/0:37,0:37:99:0,102,1041	0/0:29,0:29:84.17:0,84,844	0/0:17,0:17:48.11:0,48,490	0/0:35,0:35:96.20:0,96,970	0/0:25,0:25:75.17:0,75,765	0/0:27,0:27:69.15:0,69,704	0/0:24,0:25:74.20:0,74,741	1/1:2,32:34:84.26:1046,84,0	1/1:1,4:5:12.04:151,12,0	0/0:25,0:25:57.09:0,57,572	0/0:28,0:28:81.18:0,81,826	0/0:20,0:20:51.09:0,51,512	0/0:29,0:29:78.13:0,78,781	0/0:41,0:41:99:0,105,1058	0/0:32,0:32:87.17:0,87,880	0/0:31,0:31:90.17:0,90,905	0/0:27,0:27:69.15:0,69,704	0/0:29,0:29:81.13:0,81,805	0/0:10,0:10:27.06:0,27,275
chr10	30218322	.	T	TTCACTCAC	33022.82	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-5.015;DP=699;FS=2.197;HRun=0;HaplotypeScore=136.4363;InbreedingCoeff=0.9069;MQ=57.99;MQ0=1;MQRankSum=-6.742;QD=50.34;ReadPosRankSum=4.164;VQSLOD=4.9562;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,17:30:36.11:1422,36,0	1/1:0,4:4:12.04:481,12,0	0/0:16,0:15:27:0,27,474	0/0:27,0:25:21.09:0,21,496	1/1:6,14:21:21.07:791,21,0	1/1:15,23:40:48.16:1995,48,0	1/1:17,16:36:27.09:1064,27,0	1/1:31,0:29:30.07:535,30,0	1/1:14,16:31:45.15:1803,45,0	1/1:7,16:24:51.17:2058,51,0	1/1:1,13:15:30.10:1245,30,0	1/1:13,17:32:48.16:1899,48,0	1/1:12,18:31:30.10:1155,30,0	1/1:10,17:28:39.13:1615,39,0	1/1:8,22:35:57.20:2364,57,0	1/1:8,13:23:36.12:1480,36,0	1/1:11,0:32:41.97:360,42,0	1/1:4,0:17:32.96:272,33,0	1/1:9,8:17:36.12:1234,36,0	1/1:4,20:24:42.14:1673,42,0	1/1:8,8:17:12.04:499,12,0	1/1:7,14:21:30.10:1246,30,0	1/1:12,18:31:33.11:1370,33,0	1/1:11,9:22:15.05:623,15,0	1/1:5,18:23:45.15:1796,45,0	1/1:18,20:39:71.05:2484,71,0	1/1:8,14:25:33.11:1371,33,0	1/1:6,0:6:6.02:191,6,0
chr10	30219263	.	GA	G	18425.25	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-3.729;DP=733;FS=1.493;HRun=7;HaplotypeScore=77.7384;InbreedingCoeff=0.9883;MQ=78.50;MQ0=0;MQRankSum=-9.223;QD=26.51;ReadPosRankSum=5.490;VQSLOD=5.1841;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,45:46:99:1224,120,0	1/1:0,8:8:24.05:245,24,0	0/0:23,0:23:60.08:0,60,695	0/0:15,0:14:20.44:0,20,251	1/1:3,31:34:90.12:896,90,0	1/1:1,20:21:60.13:612,60,0	1/1:1,30:31:75.17:765,75,0	1/1:3,20:23:60.13:612,60,0	1/1:3,20:23:54.12:550,54,0	1/1:2,29:31:83.52:824,84,0	1/1:3,19:22:51.11:520,51,0	1/1:3,31:34:93.21:948,93,0	1/1:0,30:30:81.18:825,81,0	1/1:2,25:27:66.15:673,66,0	1/1:0,35:35:96.22:979,96,0	1/1:3,23:26:60.13:612,60,0	1/1:3,26:29:72.16:734,72,0	1/1:3,17:20:45.10:459,45,0	1/1:4,20:24:60.08:588,60,0	1/1:3,40:43:99:1197,120,0	1/1:0,32:32:87.20:887,87,0	1/1:3,21:24:57.12:580,57,0	1/1:0,12:12:36.08:367,36,0	1/1:0,21:21:63.14:643,63,0	1/1:1,18:19:45.10:459,45,0	1/1:1,34:35:99:1032,102,0	1/1:3,35:38:99:1040,102,0	1/1:0,7:7:15.03:153,15,0
chr10	30219610	.	A	AT	31300.89	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-9.011;DP=749;FS=0.000;HRun=0;HaplotypeScore=68.1479;InbreedingCoeff=0.9976;MQ=80.71;MQ0=0;MQRankSum=-9.841;QD=43.96;ReadPosRankSum=5.275;VQSLOD=4.9956;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,30:30:87.30:1390,87,0	1/1:0,12:12:33.11:527,33,0	0/0:20,0:20:57.13:0,57,699	0/0:17,0:17:45.06:0,45,538	1/1:0,38:38:93.32:1476,93,0	1/1:0,33:33:93.32:1486,93,0	1/1:0,23:23:66.23:1055,66,0	1/1:0,39:39:99:1838,117,0	1/1:0,39:39:99:1822,114,0	1/1:0,34:35:99:1603,102,0	1/1:2,26:28:60.20:959,60,0	1/1:1,19:20:57.19:897,57,0	1/1:0,29:29:84.29:1343,84,0	1/1:0,27:27:78.27:1246,78,0	1/1:1,32:33:96.33:1535,96,0	1/1:0,32:32:93.32:1486,93,0	1/1:0,24:23:72.25:1151,72,0	1/1:1,21:22:54.18:863,54,0	1/1:2,27:29:81.25:1232,81,0	1/1:0,31:31:87.30:1389,87,0	1/1:0,24:24:69.24:1103,69,0	1/1:0,28:28:81.28:1295,81,0	1/1:1,28:29:69.18:1102,69,0	1/1:0,15:15:39.13:623,39,0	1/1:1,25:26:66.22:1054,66,0	1/1:0,29:29:87.28:1365,87,0	1/1:0,28:28:72.22:1126,72,0	1/1:0,9:9:20.70:335,21,0
chr10	30220010	.	CTG	C	2070.04	PASS	AB=0.939;AC=42;AF=0.778;AN=54;BaseQRankSum=-2.305;DP=432;FS=2.508;HRun=0;HaplotypeScore=98.7036;InbreedingCoeff=0.1901;MQ=40.36;MQ0=34;MQRankSum=2.332;QD=5.28;ReadPosRankSum=-3.517;VQSLOD=1.6598;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:25,1:23:13.83:186,14,0	1/1:4,0:4:5.93:40,6,0	./.	0/0:1,0:1:2.80:0,3,13	1/1:12,0:10:12.20:86,12,0	1/1:21,0:19:11.66:84,12,0	1/1:14,3:14:11.29:87,11,0	1/1:28,0:26:8.76:60,9,0	1/1:20,0:19:23.81:175,24,0	1/1:9,0:9:8.80:55,9,0	1/1:17,0:16:2.73:80,3,0	1/1:19,0:17:2.48:89,2,0	1/1:7,1:8:5.96:45,6,0	0/1:12,1:12:2.98:66,0,3	1/1:16,1:15:17.94:143,18,0	1/1:20,1:20:23.46:182,23,0	0/0:25,0:22:24.81:0,25,203	0/0:13,0:11:17.49:0,17,134	0/1:15,0:14:8.98:44,0,9	0/1:17,1:18:44.22:92,0,44	1/1:24,1:20:20.88:159,21,0	0/1:13,1:13:11.02:102,0,11	1/1:10,0:9:11.96:94,12,0	0/1:24,2:21:8.16:80,0,8	1/1:8,3:9:5.90:37,6,0	0/1:15,1:13:12.18:110,0,12	1/1:14,1:13:1.24:84,1,0	1/1:6,2:5:5.96:43,6,0
chr10	30220064	.	T	TG	18189.79	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-2.342;DP=508;FS=8.335;HRun=0;HaplotypeScore=78.5699;InbreedingCoeff=0.9916;MQ=83.21;MQ0=2;MQRankSum=-8.933;QD=41.72;ReadPosRankSum=5.393;VQSLOD=5.0220;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,34:36:87.30:1388,87,0	1/1:0,8:8:24.08:384,24,0	0/0:24,0:22:60.20:0,60,838	0/0:45,0:34:82.10:0,82,1081	1/1:0,11:11:27.09:431,27,0	1/1:0,15:15:39.13:622,39,0	1/1:2,21:22:57.19:911,57,0	1/1:1,25:26:75.26:1199,75,0	1/1:0,14:14:36.12:575,36,0	1/1:1,10:11:30.10:478,30,0	1/1:0,12:12:27.09:419,27,0	1/1:1,14:15:36.12:570,36,0	1/1:0,16:16:45.15:688,45,0	1/1:0,14:14:36.12:575,36,0	1/1:0,17:17:44.95:719,45,0	1/1:1,16:17:45.15:689,45,0	1/1:0,34:34:80.80:1293,81,0	1/1:1,8:9:24.08:384,24,0	1/1:0,13:13:36.12:568,36,0	1/1:0,20:20:57.19:910,57,0	1/1:1,21:22:57.19:911,57,0	1/1:0,15:15:45.15:708,45,0	1/1:0,10:10:30.10:479,30,0	1/1:1,23:23:54.03:846,54,0	1/1:0,22:22:63.21:1006,63,0	1/1:0,10:10:30.10:480,30,0	1/1:1,15:16:42.14:670,42,0	1/1:0,6:6:18.06:288,18,0
chr10	30222071	.	ATATGTGTGTGTGTG	A	7942.20	PASS	AB=0.747;AC=40;AF=0.714;AN=56;BaseQRankSum=2.132;DP=799;FS=1.943;HRun=0;HaplotypeScore=254.2435;InbreedingCoeff=0.2672;MQ=57.27;MQ0=30;MQRankSum=2.992;QD=13.06;ReadPosRankSum=3.201;VQSLOD=3.0170;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:8,24:31:3.01:81,3,0	1/1:10,0:10:17.86:207,18,0	0/0:68,0:24:35.82:0,36,292	0/0:61,0:27:15.13:0,15,181	1/1:5,20:23:2.68:50,3,0	1/1:5,17:22:3.01:96,3,0	1/1:19,0:19:29.90:321,30,0	0/1:41,0:39:45.12:310,0,45	1/1:17,0:17:29.87:473,30,0	1/1:8,23:30:68.05:791,68,0	0/1:6,18:24:13.05:203,0,13	1/1:27,6:33:63.43:990,63,0	1/1:24,2:26:33.41:572,33,0	1/1:22,0:22:17.47:320,17,0	0/1:12,21:33:1.25:645,0,1	1/1:4,23:27:15.52:506,16,0	0/0:27,0:27:19.83:0,20,434	0/1:16,0:15:20.31:20,0,270	1/1:22,1:19:2.45:441,2,0	0/1:7,20:27:11.18:115,0,11	0/1:46,0:40:16.02:69,0,16	1/1:5,16:20:5.22:196,5,0	0/1:6,13:19:0.13:0,0,1	0/0:10,25:35:3.21:0,3,32	1/1:4,19:23:6.02:205,6,0	1/1:11,25:33:70.80:616,71,0	0/1:8,12:20:0.29:432,0,0	1/1:15,0:15:26.91:283,27,0
chr10	30222073	.	A	ATG	5887.83	PASS	AB=0.952;AC=40;AF=0.769;AN=52;BaseQRankSum=0.911;DP=796;FS=2.939;HRun=0;HaplotypeScore=165.1641;InbreedingCoeff=0.1359;MQ=56.35;MQ0=31;MQRankSum=2.280;QD=9.38;ReadPosRankSum=2.798;VQSLOD=4.8916;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:31,1:31:2.61:35,3,0	1/1:9,0:10:17.27:225,17,0	0/0:65,0:21:35.23:0,35,377	0/0:60,0:26:35.96:0,36,376	./.	1/1:22,0:21:2.99:24,3,0	1/1:22,1:23:26.35:325,26,0	1/1:37,0:35:25.56:726,26,0	1/1:17,0:19:29.18:340,29,0	1/1:29,0:28:29.46:692,29,0	0/1:24,0:24:12.92:57,0,13	1/1:33,0:33:60.70:726,61,0	1/1:24,0:24:56.09:692,56,0	1/1:22,0:22:26.91:325,27,0	0/1:31,0:31:15.57:125,0,16	1/1:26,0:26:9.63:44,10,0	0/1:27,0:27:9.34:9,0,106	0/1:18,0:17:0.70:1,0,178	0/1:25,0:21:30.09:241,0,30	1/1:28,0:28:3.47:10,3,0	0/1:18,29:41:28.30:47,0,28	1/1:21,0:21:5.21:31,5,0	./.	1/1:32,2:34:2.87:19,3,0	1/1:20,0:22:5.02:20,5,0	1/1:36,0:33:68.54:884,69,0	0/1:20,0:20:15.79:51,0,16	0/1:16,0:16:3.49:236,0,3
chr10	30222085	.	G	GCA	1553.40	PASS	AB=0.921;AC=19;AF=0.339;AN=56;BaseQRankSum=2.787;DP=741;FS=43.279;HRun=0;HaplotypeScore=183.2640;InbreedingCoeff=-0.3999;MQ=51.33;MQ0=32;MQRankSum=-0.467;QD=3.60;ReadPosRankSum=-3.211;VQSLOD=0.8174;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:34:3.40:0,3,18	0/1:6,4:12:18.62:22,0,19	0/0:55,0:13:37.65:0,38,512	0/0:46,0:14:35.97:0,36,453	1/1:25,0:23:5.80:49,6,0	0/1:19,0:18:18.28:54,0,18	0/1:19,5:24:51.41:211,0,51	0/0:36,0:34:11.21:0,11,340	0/1:13,4:17:39.39:89,0,39	0/1:30,0:29:95.26:178,0,95	0/1:20,1:21:13.27:149,0,13	0/1:29,1:30:74.91:174,0,75	0/1:23,1:24:64.58:115,0,65	0/1:18,3:21:21.81:172,0,22	0/1:25,0:25:83.83:99,0,84	0/1:25,0:25:25.90:76,0,26	0/0:24,0:24:4.06:0,4,160	0/0:19,0:18:50.74:0,51,592	0/1:26,0:22:34.42:34,0,227	0/0:24,0:24:8.76:0,9,58	0/1:41,1:36:36.72:37,0,63	0/1:21,0:20:5.50:68,0,5	0/0:15,0:15:0.79:0,1,4	0/0:35,0:34:4.94:0,5,31	0/0:21,0:21:5.68:0,6,28	0/1:33,1:31:99:116,0,105	0/1:18,0:17:6.83:7,0,31	0/1:8,4:17:57.57:58,0,61
chr10	30222099	.	G	GTGTGTGTA	613.60	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=-3.306;DP=747;FS=5.517;HRun=0;HaplotypeScore=232.1053;InbreedingCoeff=0.3175;MQ=50.80;MQ0=31;MQRankSum=-3.651;QD=12.27;ReadPosRankSum=0.524;VQSLOD=1.8249;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:39:17.88:0,18,209	0/0:12,0:12:17.70:0,18,203	0/0:38,0:3:8.96:0,9,69	0/0:37,0:9:17.98:0,18,164	0/0:31,0:28:14.60:0,15,146	0/0:20,0:19:5.97:0,6,61	0/0:24,0:24:37.41:0,37,443	0/0:33,0:32:70.87:0,71,485	0/0:17,0:17:35.97:0,36,446	0/0:36,0:36:66.49:0,66,778	0/0:24,0:24:19.37:0,19,161	0/0:27,0:27:45.67:0,46,491	0/0:19,0:19:44.51:0,45,487	0/0:19,0:19:26.97:0,27,378	0/0:31,0:31:41.85:0,42,451	0/0:29,0:28:27.50:0,28,403	1/1:4,22:30:1.07:339,1,0	0/1:20,0:19:74.39:364,0,74	0/0:17,0:16:24.92:0,25,396	0/0:28,0:28:20.44:0,20,234	0/0:36,0:30:26.77:0,27,326	0/0:23,0:22:14.37:0,14,187	0/0:22,0:22:23.11:0,23,233	0/0:40,0:39:20.33:0,20,213	0/0:24,0:24:14.97:0,15,163	0/0:37,0:35:65.72:0,66,662	0/0:20,0:19:29.56:0,30,499	0/0:12,0:12:10.38:0,10,161
chr10	30223148	.	AT	A	371.52	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.193;DP=155;FS=52.894;HRun=2;HaplotypeScore=31.9924;InbreedingCoeff=0.5215;MQ=90.61;MQ0=0;MQRankSum=-6.545;QD=20.64;ReadPosRankSum=5.971;VQSLOD=0.3582;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:2,0:2:6.02:0,6,73	0/0:3,0:3:9.03:0,9,109	0/0:9,0:9:21.06:0,21,266	0/0:12,0:7:9.58:0,10,90	0/0:6,0:6:15.03:0,15,170	0/0:3,0:3:9.02:0,9,97	0/0:2,0:2:6.02:0,6,73	0/0:11,0:11:30.08:0,30,348	0/0:5,0:5:12.04:0,12,145	0/0:5,0:5:15.05:0,15,180	0/0:4,0:4:6.89:0,7,64	0/0:3,0:3:6.02:0,6,73	0/0:4,0:4:9.90:0,10,100	0/0:4,0:4:12.02:0,12,134	0/0:9,0:9:24.95:0,25,282	0/0:4,0:4:12.02:0,12,134	1/1:0,15:16:44.48:411,44,0	1/1:0,2:2:6.02:70,6,0	0/0:3,0:3:6.90:0,7,75	0/0:10,0:10:30.06:0,30,338	0/0:8,0:8:18.04:0,18,205	0/0:6,0:6:18.06:0,18,218	0/0:5,0:5:15.01:0,15,165	0/0:1,0:1:3:0,3,25	0/0:7,0:7:21.06:0,21,254	0/0:7,0:7:19.30:0,19,221	0/0:3,0:3:9.03:0,9,109	0/0:1,0:1:3.01:0,3,36
chr10	30224363	.	T	TG	11114.30	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-2.809;DP=725;FS=6.048;HRun=8;HaplotypeScore=129.1520;InbreedingCoeff=0.9499;MQ=78.63;MQ0=0;MQRankSum=-8.630;QD=16.20;ReadPosRankSum=4.949;VQSLOD=3.8155;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:49,0:49:99:789,119,0	1/1:18,0:18:44.54:324,45,0	0/0:19,0:19:47.97:0,48,424	0/0:20,0:20:11.39:0,11,289	1/1:34,0:35:89.07:636,89,0	1/1:21,0:21:50.37:339,50,0	1/1:19,0:19:44.39:297,44,0	1/1:25,0:25:60.74:349,61,0	1/1:19,1:20:53.40:373,53,0	1/1:27,0:28:78.17:458,78,0	1/1:25,0:25:59.16:383,59,0	1/1:32,0:32:85.84:590,86,0	1/1:30,2:32:89.15:650,89,0	1/1:38,0:38:99:731,104,0	1/1:36,1:36:97.48:634,97,0	1/1:26,0:26:73.80:469,74,0	1/1:23,0:23:22.80:128,23,0	1/1:19,0:19:30.75:170,31,0	1/1:26,0:26:52.58:320,53,0	1/1:24,0:24:50.36:336,50,0	1/1:25,0:25:59.15:388,59,0	1/1:26,0:26:56.41:405,56,0	1/1:24,0:24:53.43:374,53,0	1/1:26,0:26:71.17:476,71,0	1/1:30,0:30:79.72:509,80,0	1/1:28,0:28:67.32:419,67,0	1/1:26,0:26:71.21:507,71,0	1/1:4,0:4:8.88:58,9,0
chr10	30224370	.	G	GA	24319.24	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-11.121;DP=720;FS=42.143;HRun=0;HaplotypeScore=75.6674;InbreedingCoeff=0.9835;MQ=81.44;MQ0=0;MQRankSum=-3.433;QD=37.70;ReadPosRankSum=8.936;VQSLOD=1.7021;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,49:49:99:1754,120,0	1/1:0,18:18:45.15:651,45,0	0/0:23,0:23:63.15:0,63,793	0/0:20,0:20:32.31:0,32,553	1/1:1,33:34:95.57:1308,96,0	1/1:0,22:22:51.17:745,51,0	1/1:0,21:21:45.15:657,45,0	1/1:1,27:29:84.17:1069,84,0	1/1:1,19:20:54.18:784,54,0	1/1:2,27:29:84.27:1207,84,0	1/1:0,21:21:60.20:878,60,0	1/1:2,32:34:87.27:1243,87,0	1/1:2,30:32:90.30:1302,90,0	1/1:0,41:41:99:1525,105,0	1/1:1,36:36:99:1429,99,0	1/1:0,26:26:75.25:1097,75,0	0/0:16,0:16:26.40:0,26,139	0/0:16,0:16:35.55:0,36,238	1/1:1,24:25:75.19:971,75,0	1/1:1,23:24:54.12:758,54,0	1/1:0,24:24:60.20:876,60,0	1/1:0,25:26:60.16:842,60,0	1/1:1,23:24:54.18:787,54,0	1/1:1,25:26:72.24:1053,72,0	1/1:0,29:29:81.27:1185,81,0	1/1:0,24:24:72.23:1031,72,0	1/1:0,25:26:72.24:1038,72,0	1/1:0,4:4:9.03:132,9,0
chr10	30227080	.	C	CAT	12146.30	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-3.265;DP=433;FS=13.675;HRun=0;HaplotypeScore=59.5489;InbreedingCoeff=0.6110;MQ=73.28;MQ0=5;MQRankSum=-2.362;QD=30.21;ReadPosRankSum=2.268;VQSLOD=5.3685;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,20:26:42.14:720,42,0	1/1:2,6:8:12.04:206,12,0	0/0:13,0:10:5.99:0,6,61	0/0:18,0:15:6.17:0,6,31	1/1:4,15:19:33.11:566,33,0	1/1:0,6:5:9.03:154,9,0	1/1:3,8:11:18.06:309,18,0	1/1:10,39:50:99:1888,120,0	1/1:3,10:13:21.07:360,21,0	1/1:0,17:17:48.16:804,48,0	1/1:1,9:10:18.06:309,18,0	1/1:1,12:13:26.99:463,27,0	1/1:3,21:22:36.12:617,36,0	1/1:3,4:7:9.03:153,9,0	1/1:5,18:23:45.15:771,45,0	1/1:2,13:15:24.08:411,24,0	1/1:0,0:10:8.04:59,8,0	1/1:4,0:4:2.98:22,3,0	1/1:8,19:25:57.19:927,57,0	1/1:5,17:22:36.12:617,36,0	1/1:2,13:14:24.08:412,24,0	1/1:3,5:8:12.04:206,12,0	1/1:4,5:9:9.03:154,9,0	1/1:3,5:8:12.04:206,12,0	1/1:3,13:17:36.12:617,36,0	1/1:2,16:18:48.15:783,48,0	1/1:4,11:15:21.07:360,21,0	1/1:2,4:6:3.01:51,3,0
chr10	30227230	.	AATATATATATATAT	A	749.59	PASS	AB=1.000;AC=20;AF=0.625;AN=32;BaseQRankSum=2.614;DP=146;FS=1.768;HRun=0;HaplotypeScore=64.0005;InbreedingCoeff=0.2103;MQ=73.61;MQ0=3;MQRankSum=-1.102;QD=8.92;ReadPosRankSum=0.976;VQSLOD=0.9823;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	0/0:5,0:1:0:0,0,0	0/0:6,0:6:0.47:0,0,1	1/1:3,0:3:3.01:45,3,0	0/0:2,0:2:0:0,0,0	0/1:30,0:30:0.55:1,0,18	./.	./.	./.	./.	./.	1/1:1,0:2:3.01:98,3,0	1/1:2,2:4:6.02:148,6,0	1/1:2,0:3:3.01:98,3,0	0/1:15,0:15:46.97:49,0,47	0/0:6,0:6:9.03:0,9,163	0/0:12,0:9:1.82:0,2,5	1/1:6,0:7:3.01:38,3,0	./.	./.	./.	./.	1/1:4,1:5:2.85:42,3,0	1/1:1,1:2:3.01:118,3,0	1/1:4,3:7:3.01:92,3,0	1/1:3,3:6:3.01:118,3,0
chr10	30227336	.	C	CAT	781.16	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-0.922;DP=315;FS=13.786;HRun=0;HaplotypeScore=37.0813;InbreedingCoeff=0.7321;MQ=62.12;MQ0=0;MQRankSum=-0.107;QD=26.04;ReadPosRankSum=-0.297;VQSLOD=2.7856;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:39.13:0,39,501	0/0:5,0:5:15.02:0,15,165	0/0:3,0:2:3.01:0,3,39	0/0:9,0:4:0.72:0,1,26	0/0:12,0:12:33.11:0,33,424	0/0:17,0:17:51.15:0,51,641	0/0:6,0:6:15.03:0,15,178	0/0:30,0:30:75.23:0,75,938	0/0:9,0:9:24.08:0,24,309	0/0:16,0:16:39.13:0,39,502	0/0:10,0:10:30.10:0,30,385	0/0:11,0:11:33.08:0,33,393	0/0:12,0:12:33.11:0,33,423	0/0:6,0:6:18.06:0,18,231	0/0:15,0:15:45.15:0,45,578	0/0:11,0:11:30.10:0,30,385	1/1:3,12:16:30.10:505,30,0	1/1:1,13:14:24.08:396,24,0	0/0:12,0:11:27.08:0,27,334	0/0:13,0:13:39.13:0,39,502	0/0:7,0:7:21.06:0,21,256	0/0:1,0:1:3.01:0,3,39	0/0:7,0:7:21.07:0,21,270	0/0:5,0:5:15.05:0,15,191	0/0:17,0:17:25.63:0,26,556	0/0:14,0:14:42.12:0,42,517	0/0:16,0:16:45.13:0,45,564	0/0:6,0:6:18.06:0,18,231
chr10	30227844	.	ATCTCTCTCTCTC	A	951.89	PASS	AB=0.944;AC=19;AF=0.396;AN=48;BaseQRankSum=4.284;DP=511;FS=5.056;HRun=0;HaplotypeScore=160.3980;InbreedingCoeff=-0.0509;MQ=70.76;MQ0=10;MQRankSum=-1.740;QD=4.12;ReadPosRankSum=-0.224;VQSLOD=2.5804;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:18,0:19:24.64:25,0,25	1/1:4,2:7:3.01:95,3,0	./.	./.	0/0:18,0:20:18.02:0,18,283	./.	0/0:16,0:14:3:0,3,25	0/0:33,0:30:8.35:0,8,55	0/0:11,0:11:5.79:0,6,38	0/1:15,1:16:99:100,0,108	0/1:13,0:15:14.01:112,0,14	1/1:6,0:8:2.18:22,2,0	0/0:14,0:14:1.68:0,2,18	0/0:12,0:14:8.62:0,9,164	1/1:12,1:18:3.90:94,4,0	0/1:16,0:17:27.43:30,0,27	0/1:14,0:14:28.90:104,0,29	0/0:7,0:6:5.71:0,6,32	0/1:22,0:21:21.67:43,0,22	0/1:16,0:16:15.08:15,0,34	0/1:24,0:23:15.20:15,0,142	0/1:14,0:16:43.95:44,0,44	0/0:21,0:20:15.02:0,15,274	./.	0/0:10,6:17:3:0,3,26	1/1:18,1:22:12.28:275,12,0	1/1:9,1:14:5.99:123,6,0	0/0:8,0:8:3.48:0,3,45
chr10	30227920	.	C	CAGAGACAG	341.11	PASS	AB=0.941;AC=3;AF=0.054;AN=56;BaseQRankSum=0.161;DP=621;FS=0.000;HRun=0;HaplotypeScore=178.2956;InbreedingCoeff=0.2739;MQ=49.19;MQ0=36;MQRankSum=0.486;QD=8.32;ReadPosRankSum=0.825;VQSLOD=2.5938;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:24:17.75:0,18,391	0/0:5,0:5:7.54:0,8,79	0/0:30,0:10:26.37:0,26,297	0/0:60,0:19:33.46:0,33,337	0/0:19,0:19:14.96:0,15,239	0/0:22,0:22:9.03:0,9,112	0/0:31,0:30:8.69:0,9,170	0/0:22,0:20:54.72:0,55,635	0/0:17,0:17:45.13:0,45,691	0/0:28,0:27:62.45:0,62,900	0/0:11,0:11:8.94:0,9,121	0/0:17,0:16:15.42:0,15,131	0/0:23,0:22:14.84:0,15,174	0/0:23,0:23:12.04:0,12,146	0/0:21,0:19:6.01:0,6,67	1/1:25,0:24:1.93:102,2,0	0/0:11,9:18:10.10:0,10,45	0/1:15,1:11:24.38:330,0,24	0/0:20,0:16:31.37:0,31,571	0/0:18,0:17:14.91:0,15,125	0/0:20,0:18:35.93:0,36,573	0/0:21,0:21:18.06:0,18,251	0/0:23,0:23:12.04:0,12,190	0/0:20,0:20:9.03:0,9,115	0/0:24,0:23:27.54:0,28,379	0/0:28,0:26:67.04:0,67,902	0/0:21,0:21:40.42:0,40,643	0/0:8,0:8:19.88:0,20,307
chr10	30227960	.	G	GACAC	6515.25	PASS	AB=0.769;AC=48;AF=0.857;AN=56;BaseQRankSum=1.032;DP=585;FS=2.591;HRun=0;HaplotypeScore=144.2749;InbreedingCoeff=0.5467;MQ=56.35;MQ0=22;MQRankSum=-0.495;QD=12.53;ReadPosRankSum=0.919;VQSLOD=4.6019;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:16:12.73:194,13,0	1/1:5,0:5:9.01:109,9,0	0/0:40,0:16:29.36:0,29,296	0/1:61,0:29:2.88:3,0,192	1/1:20,0:22:19.95:230,20,0	1/1:4,21:24:2.94:76,3,0	1/1:6,0:19:2.93:26,3,0	1/1:35,0:32:68.87:868,69,0	1/1:19,0:19:43.32:587,43,0	1/1:22,0:22:52.20:718,52,0	0/1:2,0:14:0.28:0,0,0	1/1:4,13:17:3.01:34,3,0	1/1:5,18:23:12.98:258,13,0	1/1:2,11:17:2.84:76,3,0	1/1:5,15:23:2.39:46,2,0	1/1:5,22:30:16.98:318,17,0	0/0:18,0:17:21.31:0,21,282	0/0:7,0:6:13.03:0,13,104	1/1:17,0:17:39.08:497,39,0	1/1:14,0:14:9.02:121,9,0	1/1:8,0:8:15.05:240,15,0	1/1:4,12:18:2.48:6,2,0	1/1:4,1:17:2.91:43,3,0	1/1:4,1:19:2.96:42,3,0	1/1:15,0:15:14.67:266,15,0	1/1:24,0:24:65.88:925,66,0	1/1:22,0:26:39.27:633,39,0	1/1:8,0:8:14.98:200,15,0
chr10	30227968	.	C	CACACACAG	7853.45	PASS	AB=1.000;AC=39;AF=0.696;AN=56;BaseQRankSum=0.259;DP=602;FS=5.386;HRun=0;HaplotypeScore=158.5170;InbreedingCoeff=0.4173;MQ=55.56;MQ0=26;MQRankSum=-2.975;QD=17.77;ReadPosRankSum=4.739;VQSLOD=3.4641;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:12:1.50:273,2,0	1/1:8,0:8:12.08:182,12,0	0/0:34,0:12:26.39:0,26,326	0/0:53,0:23:11.07:0,11,298	1/1:21,0:21:6.53:247,7,0	1/1:21,0:19:2.91:73,3,0	0/0:21,0:20:5.72:0,6,48	1/1:38,0:33:77:1269,77,0	1/1:21,0:21:22.99:264,23,0	1/1:6,17:26:9.35:1158,9,0	1/1:14,0:14:2.60:23,3,0	1/1:19,0:19:8.74:143,9,0	0/1:21,0:21:15.39:158,0,15	1/1:19,0:18:2.91:55,3,0	0/1:29,0:28:9.13:9,0,27	0/1:30,0:30:1.97:172,0,2	0/0:19,0:19:26.79:0,27,473	0/0:4,0:7:11.97:0,12,134	1/1:20,0:19:26.89:765,27,0	1/1:17,0:17:13.56:228,14,0	0/1:10,0:10:21.08:340,0,21	0/0:22,0:21:15.74:0,16,90	1/1:19,0:18:0.85:2,1,0	0/1:22,0:22:13.71:33,0,14	1/1:12,0:12:13.84:238,14,0	1/1:26,0:26:52.42:1143,52,0	1/1:25,0:25:5.44:788,5,0	1/1:10,0:10:15.52:291,16,0
chr10	30228171	.	T	TG	25947.59	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=2.048;DP=732;FS=1.408;HRun=1;HaplotypeScore=113.3035;InbreedingCoeff=0.9991;MQ=72.59;MQ0=0;MQRankSum=-3.329;QD=40.29;ReadPosRankSum=1.878;VQSLOD=4.7224;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,41:41:99:1745,117,0	1/1:0,14:14:42.14:622,42,0	0/0:12,0:12:24.07:0,24,301	0/0:15,0:15:43:0,43,526	1/1:2,16:18:48.16:699,48,0	1/1:2,26:26:69.23:1033,69,0	1/1:0,26:26:66.22:989,66,0	1/1:1,36:37:99:1618,111,0	1/1:0,27:27:78.26:1165,78,0	1/1:2,25:26:75.22:1058,75,0	1/1:3,18:21:45.15:672,45,0	1/1:0,38:37:99:1572,105,0	1/1:1,32:33:84.28:1253,84,0	1/1:0,26:26:72.24:1079,72,0	1/1:2,36:38:99:1572,105,0	1/1:0,28:27:69.23:1033,69,0	0/0:36,0:36:99:0,108,1386	0/0:25,0:25:69.22:0,69,895	1/1:1,20:21:63.21:923,63,0	1/1:0,29:29:81.26:1191,81,0	1/1:2,27:29:87.26:1262,87,0	1/1:1,26:27:81.27:1196,81,0	1/1:3,17:20:51.15:742,51,0	1/1:0,31:31:87.29:1304,87,0	1/1:1,27:28:81.27:1209,81,0	1/1:1,21:21:60.14:834,60,0	1/1:3,19:22:44.21:772,44,0	1/1:0,12:12:27.09:404,27,0
chr10	30228901	.	AT	A	11659.26	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=4.844;DP=529;FS=10.522;HRun=7;HaplotypeScore=52.0691;InbreedingCoeff=0.9586;MQ=74.13;MQ0=0;MQRankSum=-2.975;QD=25.24;ReadPosRankSum=3.544;VQSLOD=4.8209;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,37:37:99:1040,102,0	1/1:0,7:7:21.05:214,21,0	0/0:17,0:13:30.08:0,30,358	0/0:14,0:11:17.67:0,18,158	1/1:6,30:36:87.19:887,87,0	1/1:2,20:22:54.08:540,54,0	1/1:0,10:10:27.06:275,27,0	1/1:10,31:41:93.17:937,93,0	1/1:1,14:15:39.09:398,39,0	1/1:2,17:19:51.08:506,51,0	1/1:1,21:22:54.03:537,54,0	1/1:1,18:19:48.11:490,48,0	1/1:3,19:22:51.11:520,51,0	1/1:0,9:9:27.06:275,27,0	1/1:2,13:15:33.07:337,33,0	1/1:1,18:19:54.12:551,54,0	0/0:17,0:17:45.14:0,45,566	0/0:19,0:19:51.14:0,51,624	1/1:3,20:23:60.10:603,60,0	1/1:4,17:21:48.10:490,48,0	1/1:2,4:6:9.02:92,9,0	1/1:2,6:8:15.03:153,15,0	1/1:0,19:19:51.12:520,51,0	1/1:1,8:9:21.05:214,21,0	1/1:4,18:22:51.11:520,51,0	1/1:3,21:24:60.13:612,60,0	1/1:3,29:32:84.19:857,84,0	1/1:0,5:5:9.02:91,9,0
chr10	30229565	.	TAGAGAGAGAGAGAGAGAGAGAGAGAGAGGAGGGAGAGAGAGGGAGAGAGAGAGAGAGAG	T	461.65	PASS	AB=1.000;AC=21;AF=0.457;AN=46;BaseQRankSum=1.154;DP=319;FS=21.265;HRun=0;HaplotypeScore=131.4129;InbreedingCoeff=0.4621;MQ=26.14;MQ0=39;MQRankSum=3.365;QD=4.16;ReadPosRankSum=3.608;VQSLOD=1.1270;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:16:3.13:0,3,12	0/0:3,0:2:0:0,0,0	0/0:37,0:2:6.01:0,6,82	0/0:46,0:7:11.36:0,11,190	0/0:4,5:9:0:0,0,0	./.	./.	1/1:24,0:12:11.20:79,11,0	1/1:13,0:11:2.17:8,2,0	1/1:6,0:4:8.05:79,8,0	0/1:6,0:5:0:0,0,0	0/0:8,0:7:0.47:0,0,1	1/1:5,0:5:2.22:7,2,0	./.	1/1:10,0:9:1.61:6,2,0	1/1:10,0:10:3.01:30,3,0	0/0:11,0:8:3.95:0,4,53	0/0:7,0:6:5.77:0,6,42	1/1:12,0:9:11.77:179,12,0	1/1:11,0:10:0.47:1,0,0	0/0:12,0:11:0:0,0,0	./.	0/0:7,0:5:0.47:0,0,1	0/0:4,0:3:2.23:0,2,43	0/0:8,0:8:0.89:0,1,2	1/1:10,0:10:14.99:159,15,0	1/1:4,0:4:2.57:33,3,0	./.
chr10	30229592	.	AG	A	644.01	PASS	AB=0.757;AC=26;AF=0.619;AN=42;BaseQRankSum=-0.348;DP=318;FS=0.000;HRun=2;HaplotypeScore=35.3345;InbreedingCoeff=0.3943;MQ=24.47;MQ0=47;MQRankSum=1.712;QD=4.24;ReadPosRankSum=-0.265;VQSLOD=0.1612;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,9:18:0.71:1,1,0	1/1:0,2:2:3.01:38,3,0	0/0:41,0:2:6:0,6,62	0/0:66,0:8:0.47:0,0,117	./.	1/1:7,0:8:0.47:1,0,0	./.	1/1:10,0:5:2.80:7,3,0	0/1:7,4:10:0:0,0,0	1/1:4,6:6:18.05:213,18,0	0/1:2,2:4:0:0,0,0	0/1:5,4:7:0:0,0,0	0/0:7,0:6:3.01:0,3,40	./.	./.	1/1:10,1:11:3.01:38,3,0	0/0:5,2:5:2.59:0,3,28	0/0:6,0:5:7.54:0,8,62	1/1:3,5:7:14.78:163,15,0	1/1:0,9:9:3.90:40,4,0	0/1:12,0:5:0:0,0,0	./.	0/1:1,7:7:0:1,0,0	1/1:4,0:2:2.80:15,3,0	0/1:10,0:11:0:0,0,0	1/1:15,0:12:1.62:232,2,0	./.	./.
chr10	30229593	.	G	GA	734.86	PASS	AB=0.764;AC=25;AF=0.625;AN=40;BaseQRankSum=-0.244;DP=298;FS=1.342;HRun=1;HaplotypeScore=37.2380;InbreedingCoeff=0.3672;MQ=24.40;MQ0=47;MQRankSum=1.504;QD=5.25;ReadPosRankSum=-0.186;VQSLOD=0.2374;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,2:15:1.19:4,1,0	1/1:2,0:2:3.01:39,3,0	0/0:40,0:2:6.01:0,6,68	0/0:66,0:8:2.74:0,3,122	./.	1/1:2,6:8:0.47:1,0,0	./.	./.	0/1:5,5:9:0:0,0,0	1/1:9,1:6:18.06:235,18,0	0/1:2,1:3:0:0,0,0	0/1:5,2:6:0.02:0,0,0	0/0:2,5:6:3.01:0,3,40	./.	./.	1/1:1,10:11:3.01:38,3,0	0/0:6,0:4:3.01:0,3,37	0/1:5,1:5:0.17:0,0,64	1/1:6,0:5:15.05:188,15,0	1/1:9,0:9:3.90:41,4,0	0/1:8,4:5:0:0,0,0	./.	0/1:8,0:7:0:1,0,0	1/1:4,0:2:2.72:15,3,0	0/1:2,10:12:0.48:0,0,0	1/1:3,12:12:1.72:275,2,0	./.	./.
chr10	30231084	.	CCT	C	15450.25	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=9.833;DP=561;FS=2.658;HRun=0;HaplotypeScore=106.2464;InbreedingCoeff=0.9866;MQ=83.74;MQ0=0;MQRankSum=-6.772;QD=32.87;ReadPosRankSum=2.869;VQSLOD=6.9910;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,29:29:54.18:805,54,0	1/1:0,5:5:15.05:223,15,0	0/0:22,0:22:63.18:0,63,977	0/0:18,0:18:48.09:0,48,696	1/1:0,21:21:51.03:683,51,0	1/1:1,14:15:30.06:422,30,0	1/1:0,24:23:45.08:643,45,0	1/1:2,28:30:84.08:1094,84,0	1/1:0,15:15:30.10:447,30,0	1/1:1,11:12:35.93:462,36,0	1/1:1,16:17:32.97:447,33,0	1/1:1,26:27:60.07:819,60,0	1/1:0,22:22:54.18:805,54,0	1/1:0,25:25:57.15:824,57,0	1/1:0,21:21:51.13:736,51,0	1/1:0,27:27:63.21:938,63,0	0/0:29,0:29:87.30:0,87,1520	0/0:22,0:22:63.09:0,63,1002	1/1:1,18:19:51:646,51,0	1/1:0,20:20:48.01:639,48,0	1/1:2,26:28:45.14:652,45,0	1/1:1,16:17:39.13:576,39,0	1/1:0,12:12:33.11:477,33,0	1/1:0,22:22:51.15:761,51,0	1/1:1,12:13:33.11:492,33,0	1/1:0,20:20:57.08:745,57,0	1/1:1,23:24:63.21:938,63,0	1/1:0,4:4:12.04:179,12,0
chr10	30232195	.	TA	T	13835.11	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=6.395;DP=578;FS=0.000;HRun=7;HaplotypeScore=75.5697;InbreedingCoeff=0.9877;MQ=77.84;MQ0=0;MQRankSum=-1.558;QD=27.18;ReadPosRankSum=2.297;VQSLOD=5.5220;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,24:25:63.14:643,63,0	1/1:1,8:9:18.04:184,18,0	0/0:15,0:15:33.06:0,33,354	0/0:10,0:10:11.97:0,12,117	1/1:3,26:29:69.11:693,69,0	1/1:1,23:24:69.16:704,69,0	1/1:0,14:14:36.08:367,36,0	1/1:2,24:26:72.14:726,72,0	1/1:1,19:20:57.13:582,57,0	1/1:1,25:26:78.15:779,78,0	1/1:1,35:36:99:1026,102,0	1/1:0,14:14:36.08:367,36,0	1/1:1,20:21:51.11:520,51,0	1/1:1,19:20:54.12:550,54,0	1/1:0,16:16:45.10:459,45,0	1/1:0,29:29:84.19:857,84,0	0/0:24,0:24:69.19:0,69,852	0/0:20,0:20:60.19:0,60,754	1/1:1,16:17:48.11:490,48,0	1/1:0,22:22:60.13:612,60,0	1/1:0,11:11:27.06:275,27,0	1/1:0,17:17:48.11:490,48,0	1/1:0,23:23:59.92:612,60,0	1/1:3,10:13:27.05:275,27,0	1/1:1,23:24:66.15:673,66,0	1/1:2,32:34:96.20:972,96,0	1/1:3,25:28:72.16:734,72,0	1/1:0,11:11:24.05:244,24,0
chr10	30232585	.	CTT	C	5414.34	PASS	AB=0.770;AC=50;AF=0.893;AN=56;BaseQRankSum=-5.296;DP=486;FS=0.878;HRun=16;HaplotypeScore=71.8805;InbreedingCoeff=0.3912;MQ=71.09;MQ0=15;MQRankSum=0.481;QD=11.50;ReadPosRankSum=2.726;VQSLOD=3.9748;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,13:20:30.19:289,30,0	0/1:2,1:4:3.09:20,0,3	0/1:22,0:13:1.39:1,0,29	0/0:14,0:12:8.99:0,9,83	1/1:6,13:19:29.59:237,30,0	1/1:7,8:19:36.34:257,36,0	1/1:3,11:16:20.62:204,21,0	1/1:11,11:24:28:265,28,0	1/1:4,10:16:34.80:285,35,0	1/1:4,12:17:23.78:242,24,0	1/1:4,8:15:13.82:140,14,0	1/1:13,11:24:29.46:249,29,0	1/1:9,9:19:4.40:116,4,0	1/1:6,7:15:32.52:255,33,0	1/1:4,8:13:29.62:237,30,0	1/1:5,11:18:12.67:259,13,0	1/1:12,17:29:33.38:384,33,0	1/1:5,6:8:17.95:150,18,0	1/1:8,9:17:32.32:249,32,0	1/1:8,8:17:26.31:198,26,0	1/1:7,5:10:14.81:125,15,0	1/1:3,6:10:14.57:154,15,0	1/1:6,11:17:29.86:251,30,0	0/1:6,2:9:3.42:45,0,3	1/1:7,15:23:28.21:277,28,0	1/1:9,7:17:29.22:214,29,0	1/1:8,13:21:35.68:292,36,0	0/1:5,1:5:3.07:20,0,3
chr10	30232810	.	ATGTGTGTGTGTGTGTG	A	12650.31	PASS	AB=0.742;AC=45;AF=0.833;AN=54;BaseQRankSum=2.466;DP=526;FS=4.079;HRun=0;HaplotypeScore=219.9589;InbreedingCoeff=0.4570;MQ=60.44;MQ0=11;MQRankSum=-1.934;QD=29.49;ReadPosRankSum=2.542;VQSLOD=3.3898;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,4:17:8.10:520,8,0	1/1:6,4:10:12.04:526,12,0	0/0:28,0:15:3.01:0,3,34	0/0:32,0:16:0:0,0,0	1/1:8,6:13:3.01:132,3,0	1/1:18,14:32:33.03:1333,33,0	1/1:15,0:16:3.48:112,3,0	0/0:17,0:16:6.02:0,6,220	1/1:12,1:13:3.01:132,3,0	1/1:15,6:19:12.01:244,12,0	1/1:6,10:17:27.09:1164,27,0	1/1:11,8:19:18.06:790,18,0	1/1:8,9:17:20.79:860,21,0	1/1:14,9:23:21.06:921,21,0	1/1:12,10:22:21.07:921,21,0	1/1:7,8:15:18.53:790,19,0	0/1:15,0:23:86.34:86,0,278	0/0:15,0:15:8.39:0,8,96	1/1:11,4:15:9.01:287,9,0	1/1:14,8:22:21.07:921,21,0	1/1:20,2:22:3.01:110,3,0	1/1:7,8:15:15.05:648,15,0	1/1:8,6:14:9.03:395,9,0	1/1:19,5:24:6.02:187,6,0	1/1:11,6:17:6.02:263,6,0	1/1:12,7:18:18.03:516,18,0	1/1:13,8:21:17.72:789,18,0	./.
chr10	30239838	.	T	TACACACACACACACAC	8638.97	PASS	AB=1.000;AC=47;AF=0.904;AN=52;BaseQRankSum=-3.053;DP=577;FS=0.000;HRun=0;HaplotypeScore=258.4773;InbreedingCoeff=0.0472;MQ=54.30;MQ0=9;MQRankSum=1.531;QD=17.04;ReadPosRankSum=0.413;VQSLOD=3.4375;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:35,0:32:9.02:144,9,0	1/1:15,0:15:6.02:192,6,0	./.	./.	1/1:16,0:13:2.99:24,3,0	1/1:18,0:17:6.02:278,6,0	0/1:19,0:18:17.59:723,0,18	1/1:23,0:21:17.08:348,17,0	1/1:14,0:14:5.99:143,6,0	1/1:16,0:15:18.06:915,18,0	1/1:16,0:15:3.01:70,3,0	1/1:27,0:24:6.02:403,6,0	1/1:17,0:16:14.41:587,14,0	1/1:28,0:27:14.77:265,15,0	1/1:19,0:23:4.70:252,5,0	1/1:29,0:28:21.07:500,21,0	0/1:21,0:21:11.11:882,0,11	1/1:13,0:13:16.21:515,16,0	1/1:25,0:24:29.07:533,29,0	1/1:20,0:18:3:25,3,0	1/1:20,0:19:2.67:49,3,0	1/1:14,0:13:12.03:509,12,0	1/1:24,0:24:6.01:215,6,0	0/0:20,1:21:0.28:0,0,0	0/1:23,0:21:0:1,0,0	1/1:18,0:15:15.05:568,15,0	1/1:19,0:18:9.01:271,9,0	1/1:12,0:12:3.01:225,3,0
chr10	30240374	.	A	AC	26425.98	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-9.498;DP=733;FS=5.094;HRun=2;HaplotypeScore=66.1666;InbreedingCoeff=0.9978;MQ=78.30;MQ0=0;MQRankSum=-9.547;QD=38.13;ReadPosRankSum=6.347;VQSLOD=4.9583;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:5,37:42:96.32:1372,96,0	1/1:0,12:13:36.12:505,36,0	0/0:23,0:23:65.81:0,66,715	0/0:17,0:17:42.12:0,42,507	1/1:2,22:25:69.23:980,69,0	1/1:2,24:26:63.21:907,63,0	1/1:3,26:29:72.24:1037,72,0	1/1:3,33:36:99:1407,99,0	1/1:0,20:20:60.20:863,60,0	1/1:2,25:27:72.23:1016,72,0	1/1:0,17:17:48.16:691,48,0	1/1:2,28:30:81.27:1167,81,0	1/1:2,34:36:93.02:1338,93,0	1/1:2,24:26:72.24:1028,72,0	1/1:0,36:36:96.32:1383,96,0	1/1:1,32:33:90.30:1296,90,0	1/1:2,30:32:87.29:1253,87,0	1/1:1,19:20:57.19:816,57,0	1/1:2,33:36:99:1442,102,0	1/1:1,25:26:72.24:1033,72,0	1/1:1,26:27:72.24:1037,72,0	1/1:2,26:28:72.24:1037,72,0	1/1:0,23:23:66.22:950,66,0	1/1:0,24:24:66.22:950,66,0	1/1:2,21:23:54.18:778,54,0	1/1:0,21:21:63.19:887,63,0	1/1:2,25:27:66.22:950,66,0	1/1:0,10:10:21.07:302,21,0
chr10	30242309	.	TTGTGTGTG	T	5158.21	PASS	AC=46;AF=0.958;AN=48;BaseQRankSum=1.313;DP=531;FS=0.000;HRun=0;HaplotypeScore=159.9055;InbreedingCoeff=0.2200;MQ=56.46;MQ0=13;MQRankSum=-1.638;QD=12.02;ReadPosRankSum=1.213;VQSLOD=3.1416;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:27,9:38:6.02:131,6,0	1/1:7,5:13:15.05:356,15,0	./.	./.	1/1:10,5:15:0.47:1,0,0	1/1:14,12:26:20.92:411,21,0	1/1:12,4:17:3.01:56,3,0	0/0:24,0:24:2.13:0,2,5	1/1:19,7:26:9.02:225,9,0	1/1:9,2:11:3:75,3,0	1/1:13,3:15:6.02:150,6,0	1/1:12,9:21:17.76:450,18,0	1/1:12,7:19:12.04:300,12,0	1/1:16,7:23:14.79:372,15,0	1/1:13,9:21:18.06:450,18,0	1/1:13,2:15:6.02:150,6,0	1/1:14,0:18:12.04:223,12,0	./.	1/1:16,0:17:9.03:168,9,0	1/1:15,0:21:18.06:322,18,0	./.	1/1:8,4:12:3.01:75,3,0	1/1:9,2:13:6.02:112,6,0	1/1:17,4:21:2.74:75,3,0	1/1:5,9:14:12:245,12,0	1/1:8,4:13:12.04:251,12,0	1/1:15,6:22:18.06:431,18,0	1/1:7,3:11:5.01:129,5,0
chr10	30242736	.	GT	G	11969.69	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-3.693;DP=585;FS=13.421;HRun=10;HaplotypeScore=56.5876;InbreedingCoeff=0.9560;MQ=73.65;MQ0=0;MQRankSum=-5.467;QD=21.30;ReadPosRankSum=4.646;VQSLOD=4.6509;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,16:17:41.99:365,42,0	1/1:0,8:8:24:208,24,0	0/0:13,0:13:24.06:0,24,262	0/0:10,0:10:21.02:0,21,216	1/1:1,33:35:99:858,101,0	1/1:2,13:15:35.99:313,36,0	1/1:0,17:17:38.99:339,39,0	1/1:9,19:28:52.97:444,53,0	1/1:1,14:15:41.99:365,42,0	1/1:5,29:34:86.97:755,87,0	1/1:2,32:34:95.84:817,96,0	1/1:3,16:19:44.98:391,45,0	1/1:4,17:21:47.99:417,48,0	1/1:2,17:19:44.99:391,45,0	1/1:1,21:22:50.99:443,51,0	1/1:1,23:24:52.38:580,52,0	1/1:3,17:20:44.99:391,45,0	1/1:3,20:23:56.98:495,57,0	1/1:3,9:12:26.99:234,27,0	1/1:4,26:30:74.83:634,75,0	1/1:2,9:11:23.98:208,24,0	1/1:3,18:21:47.96:417,48,0	1/1:4,27:31:74.98:651,75,0	1/1:0,12:12:32.99:287,33,0	1/1:0,25:25:68.99:599,69,0	1/1:3,19:22:26.80:462,27,0	1/1:2,37:39:95.98:833,96,0	1/1:3,5:8:7.75:76,8,0
chr10	30243164	.	ATTTGTTTG	A	17914.97	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=-7.107;DP=583;FS=7.396;HRun=0;HaplotypeScore=168.3500;InbreedingCoeff=0.9717;MQ=60.34;MQ0=3;MQRankSum=-10.357;QD=41.28;ReadPosRankSum=2.138;VQSLOD=3.9886;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,8:18:11.96:279,12,0	1/1:2,7:9:15.05:382,15,0	0/0:26,0:23:15.94:0,16,513	0/0:15,0:13:12.03:0,12,400	1/1:7,18:25:42.10:1007,42,0	1/1:8,19:27:54.19:1375,54,0	1/1:6,15:21:27.09:687,27,0	1/1:26,5:31:15.03:295,15,0	1/1:2,11:13:24.08:611,24,0	1/1:11,18:29:54.19:1368,54,0	1/1:6,16:22:39.09:914,39,0	1/1:8,17:24:48.16:1222,48,0	1/1:1,17:18:48.16:1222,48,0	1/1:5,19:24:48.16:1222,48,0	1/1:6,16:22:48.16:1222,48,0	1/1:5,11:16:33.11:840,33,0	0/0:9,0:23:24.09:0,24,470	0/0:6,0:15:26.99:0,27,334	0/0:15,0:18:14.65:0,15,127	0/0:8,0:33:74.98:0,75,772	0/0:4,0:19:32.96:0,33,271	1/1:10,14:24:33.07:784,33,0	1/1:6,17:23:42.14:1069,42,0	1/1:3,7:10:18.06:458,18,0	1/1:6,11:17:18.06:458,18,0	1/1:9,13:22:42.14:1070,42,0	1/1:13,13:25:39.13:993,39,0	1/1:5,6:11:18.06:438,18,0
chr10	30244871	.	A	AAC	2100.93	PASS	AB=0.832;AC=37;AF=0.712;AN=52;BaseQRankSum=-0.256;DP=612;FS=26.744;HRun=0;HaplotypeScore=82.2793;InbreedingCoeff=-0.4146;MQ=55.41;MQ0=16;MQRankSum=1.018;QD=3.81;ReadPosRankSum=2.225;VQSLOD=0.6539;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:38,1:40:7.29:119,7,0	1/1:3,4:9:9.02:115,9,0	./.	./.	0/1:13,8:22:35.52:278,0,36	0/1:20,10:30:99:107,0,168	0/1:14,7:22:28.29:28,0,78	1/1:22,0:22:0.47:1,0,0	0/1:17,1:19:54.69:99,0,55	1/1:26,0:26:17.89:136,18,0	0/1:15,1:15:16.03:97,0,16	0/1:10,8:20:66.96:199,0,67	0/1:17,4:20:26.39:26,0,147	0/1:18,0:18:18.87:99,0,19	0/1:25,1:27:72.31:128,0,72	0/1:20,8:30:52.57:95,0,53	1/1:19,0:19:9.01:105,9,0	1/1:11,0:13:3.31:16,3,0	1/1:15,0:16:2.60:10,3,0	1/1:15,0:15:9.02:107,9,0	0/1:12,0:11:0:0,0,0	0/1:15,7:23:99:131,0,119	0/1:15,4:21:35.50:36,0,56	0/1:22,10:34:68:68,0,141	0/1:23,0:25:17.26:17,0,214	1/1:19,0:19:6:53,6,0	1/1:15,0:21:0.51:136,1,0	1/1:6,0:5:3.01:35,3,0
chr10	30245378	.	AAC	A	259.14	PASS	AC=18;AF=0.529;AN=34;BaseQRankSum=-1.953;DP=355;FS=0.000;HRun=0;HaplotypeScore=66.3577;InbreedingCoeff=0.3502;MQ=65.78;MQ0=8;MQRankSum=-0.315;QD=2.14;ReadPosRankSum=0.315;VQSLOD=1.2593;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:16:2.95:20,3,0	0/0:8,0:8:0:0,0,0	./.	0/0:20,0:14:0:0,0,0	1/1:15,0:15:3.01:33,3,0	0/0:14,0:14:0:0,0,0	1/1:7,0:7:2.97:20,3,0	./.	0/0:12,0:11:0.47:0,0,1	1/1:15,4:18:12.01:115,12,0	./.	./.	./.	./.	1/1:20,0:20:2.96:20,3,0	0/0:5,0:5:0.47:0,0,1	./.	0/0:10,0:10:6.01:0,6,58	1/1:14,2:16:5.99:56,6,0	./.	1/1:9,0:9:2.98:22,3,0	0/0:15,0:15:0:0,0,0	1/1:9,1:10:3.89:34,4,0	1/1:9,0:9:3.01:33,3,0	./.	./.	./.	0/0:5,0:5:2.98:0,3,21
chr10	30283405	.	A	AT	33.17	PASS	AC=4;AF=1.00;AN=4;DP=19;FS=0.000;HRun=0;HaplotypeScore=8.9754;MQ=18.86;MQ0=10;QD=8.29;VQSLOD=2.9228;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	./.	1/1:0,1:1:3.01:33,3,0	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	1/1:1,2:2:6.01:64,6,0	./.	./.	./.	./.	./.	./.	./.
chr10	30286026	.	T	TG	2641.97	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=12.310;DP=608;FS=2.690;HRun=1;HaplotypeScore=68.7657;InbreedingCoeff=0.9886;MQ=82.44;MQ0=1;MQRankSum=-2.507;QD=26.96;ReadPosRankSum=1.110;VQSLOD=3.5757;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:63.20:0,63,816	0/0:7,0:7:21.07:0,21,272	0/0:32,0:31:81.17:0,81,1077	0/0:26,0:26:62.57:0,63,821	0/0:27,0:27:81.25:0,81,1035	0/0:19,0:19:54.18:0,54,700	0/0:24,0:24:63.19:0,63,802	0/0:27,0:27:72.23:0,72,932	0/0:30,0:30:90.29:0,90,1166	0/0:38,0:38:99:0,108,1379	0/0:24,0:24:69.20:0,69,867	0/0:5,0:5:15.03:0,15,177	0/0:17,0:17:51.17:0,51,662	0/0:24,0:24:72.23:0,72,934	0/0:15,0:15:45.15:0,45,584	0/0:10,0:10:30.10:0,30,390	1/1:4,20:25:44.24:750,44,0	1/1:1,4:5:12.51:147,13,0	1/1:6,12:18:29.45:477,29,0	1/1:3,19:22:35.18:576,35,0	1/1:5,22:27:70.38:866,70,0	0/0:20,0:20:60.18:0,60,762	0/0:30,0:30:87.27:0,87,1113	0/0:22,0:22:66.20:0,66,841	0/0:14,0:14:42.14:0,42,545	0/0:33,0:33:99:0,99,1247	0/0:24,0:24:72.23:0,72,919	0/0:16,0:16:48.16:0,48,623
chr10	30287128	.	C	CA	640.10	PASS	AC=8;AF=0.148;AN=54;BaseQRankSum=6.378;DP=470;FS=12.674;HRun=2;HaplotypeScore=47.5625;InbreedingCoeff=0.9043;MQ=52.13;MQ0=9;MQRankSum=-6.686;QD=18.29;ReadPosRankSum=-2.914;VQSLOD=1.7699;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,117,1503	0/0:7,0:7:21.07:0,21,272	0/0:20,0:3:9.03:0,9,116	0/0:23,0:4:12.04:0,12,156	0/0:14,0:14:39.13:0,39,505	0/0:14,0:14:36.12:0,36,462	0/0:22,0:21:63.16:0,63,794	0/0:28,0:27:78.22:0,78,983	0/0:19,0:19:47.76:0,48,622	0/0:12,0:12:36.12:0,36,468	0/0:14,0:14:42.12:0,42,531	0/0:18,0:18:54.17:0,54,686	0/0:18,0:18:51.16:0,51,657	0/0:24,0:24:69.21:0,69,875	0/0:14,1:15:42.14:0,42,545	0/0:21,0:21:63.20:0,63,817	1/1:1,7:7:12.04:169,12,0	./.	1/1:3,4:4:12.04:180,12,0	1/1:2,14:16:30.05:391,30,0	1/1:2,2:4:3.01:45,3,0	0/0:11,0:11:33.11:0,33,428	0/0:17,0:17:51.17:0,51,662	0/0:14,0:14:33.11:0,33,423	0/0:10,0:10:27.07:0,27,334	0/0:28,0:28:84.27:0,84,1091	0/0:30,0:30:78.22:0,78,993	0/0:13,0:13:36.12:0,36,467
chr10	30287361	.	G	GA	1739.71	PASS	AB=0.909;AC=11;AF=0.196;AN=56;BaseQRankSum=-5.429;DP=291;FS=12.782;HRun=0;HaplotypeScore=34.8163;InbreedingCoeff=0.7988;MQ=69.72;MQ0=0;MQRankSum=-0.347;QD=24.85;ReadPosRankSum=3.051;VQSLOD=3.4504;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:9,1:10:12.30:12,0,268	0/0:2,0:2:6.02:0,6,71	0/0:10,0:8:11.46:0,11,83	0/0:12,0:8:1.26:0,1,54	0/0:17,0:17:39.93:0,40,527	0/0:4,0:4:12.03:0,12,152	0/0:6,0:6:18.05:0,18,228	0/0:16,0:16:42.08:0,42,486	0/0:7,0:7:21.07:0,21,293	0/0:7,0:7:18.05:0,18,235	0/0:19,0:19:42.08:0,42,530	0/0:9,0:9:21.07:0,21,293	0/0:14,0:14:39.06:0,39,459	0/0:12,0:11:33.06:0,33,395	0/0:8,0:8:19.49:0,19,287	0/0:10,0:10:30.07:0,30,369	1/1:0,19:19:42.14:598,42,0	1/1:0,13:13:33.07:448,33,0	1/1:0,7:7:21.05:280,21,0	1/1:1,8:9:21.01:276,21,0	1/1:0,12:12:21.07:300,21,0	0/0:13,0:13:39.09:0,39,499	0/0:11,0:11:27.08:0,27,356	0/0:5,0:5:15.05:0,15,207	0/0:8,0:8:24.03:0,24,297	0/0:10,0:10:30.02:0,30,346	0/0:16,0:16:48.14:0,48,637	0/0:5,0:5:12.04:0,12,167
chr10	30288965	.	CTT	C	1916.06	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=6.069;DP=546;FS=1.512;HRun=13;HaplotypeScore=71.6672;InbreedingCoeff=0.9597;MQ=72.54;MQ0=1;MQRankSum=-0.660;QD=18.60;ReadPosRankSum=4.040;VQSLOD=3.1776;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:34:89.18:0,89,1091	0/0:8,0:9:23.55:0,24,294	0/0:19,0:20:3.49:0,3,128	0/0:16,0:14:23.66:0,24,217	0/0:30,0:30:79.40:0,79,965	0/0:17,0:17:48.14:0,48,643	0/0:28,0:30:69.99:0,70,853	0/0:20,0:21:42.84:0,43,537	0/0:14,0:14:36.08:0,36,452	0/0:24,0:26:59.62:0,60,700	0/0:12,0:13:32.58:0,33,413	0/0:16,0:16:48.09:0,48,575	0/0:14,0:14:36.03:0,36,396	0/0:16,0:19:39.09:0,39,482	0/0:18,0:19:54.11:0,54,707	0/0:12,0:13:29.58:0,30,381	1/1:3,16:20:53.80:506,54,0	1/1:3,16:19:36.05:349,36,0	1/1:9,7:16:17.83:215,18,0	1/1:3,21:24:59.95:571,60,0	1/1:7,15:23:47.76:448,48,0	0/0:22,0:22:66.17:0,66,881	0/0:21,0:22:50.44:0,50,575	0/0:17,0:18:52.65:0,53,684	0/0:14,0:18:30.07:0,30,368	0/0:19,0:19:51.15:0,51,685	0/0:13,0:13:38.59:0,39,494	0/0:15,0:16:29.56:0,30,363
chr10	30289146	.	GT	G	3155.68	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=10.981;DP=501;FS=0.886;HRun=2;HaplotypeScore=56.0447;InbreedingCoeff=0.9566;MQ=88.60;MQ0=0;MQRankSum=-1.714;QD=29.77;ReadPosRankSum=3.470;VQSLOD=3.2462;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:79.74:0,80,1123	0/0:6,0:6:18.04:0,18,232	0/0:31,1:31:61.65:0,62,951	0/0:25,0:21:18.68:0,19,597	0/0:15,0:15:45.14:0,45,649	0/0:14,0:14:42.13:0,42,607	0/0:29,0:29:87.21:0,87,1209	0/0:29,0:29:87.26:0,87,1246	0/0:13,0:13:36.08:0,36,479	0/0:19,0:19:51.16:0,51,724	0/0:10,0:10:30.10:0,30,448	0/0:15,0:15:45.14:0,45,653	0/0:16,0:16:48.14:0,48,685	0/0:19,0:19:57.12:0,57,786	0/0:12,0:12:36.12:0,36,537	0/0:13,0:13:39.12:0,39,564	1/1:0,23:23:54.18:700,54,0	1/1:0,17:17:36.12:466,36,0	1/1:1,19:20:54.10:629,54,0	1/1:1,21:22:60.15:759,60,0	1/1:0,24:24:60.19:776,60,0	0/0:12,0:12:33.10:0,33,461	0/0:22,0:22:57.09:0,57,800	0/0:24,0:24:72.22:0,72,1032	0/0:18,0:18:54.17:0,54,788	0/0:10,0:10:30.10:0,30,446	0/0:12,0:12:30.08:0,30,410	0/0:1,0:1:3.01:0,3,45
chr10	30289990	.	GT	G	2168.62	PASS	AB=0.813;AC=11;AF=0.196;AN=56;BaseQRankSum=11.697;DP=565;FS=3.548;HRun=11;HaplotypeScore=68.4072;InbreedingCoeff=0.7120;MQ=66.68;MQ0=0;MQRankSum=-1.711;QD=14.96;ReadPosRankSum=1.285;VQSLOD=4.4339;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:31:83.37:0,83,837	0/0:8,0:8:24.06:0,24,256	0/1:17,1:16:6.61:7,0,170	0/1:8,0:9:21.63:22,0,73	0/0:21,1:22:32.50:0,32,551	0/0:19,1:19:29.48:0,29,513	0/0:16,0:16:36.07:0,36,375	0/0:24,1:26:29.29:0,29,476	0/0:19,0:19:54.12:0,54,567	0/0:23,0:23:57:0,57,584	0/0:27,0:27:69.06:0,69,698	0/0:12,0:12:33.04:0,33,339	0/0:15,0:15:42.11:0,42,447	0/0:21,0:21:51.13:0,51,544	0/0:22,0:22:54.11:0,54,562	0/0:16,0:16:20.45:0,20,414	1/1:6,20:28:69.71:538,70,0	1/1:3,18:21:55.18:447,55,0	0/1:8,18:26:4.07:381,0,4	1/1:3,29:32:75.52:699,76,0	1/1:0,11:11:29.97:246,30,0	0/0:22,0:22:57.13:0,57,600	0/0:32,0:33:87.60:0,88,884	0/0:9,0:9:21.05:0,21,224	0/0:16,0:16:20.84:0,21,395	0/0:24,0:24:66.13:0,66,687	0/0:28,0:28:75.09:0,75,761	0/0:10,0:10:27.07:0,27,288
chr10	30290235	.	G	GA	4080.15	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=13.696;DP=698;FS=0.000;HRun=1;HaplotypeScore=76.9118;InbreedingCoeff=0.9998;MQ=75.30;MQ0=1;MQRankSum=-3.370;QD=36.76;ReadPosRankSum=2.819;VQSLOD=4.0871;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:86.04:0,86,1180	0/0:13,0:13:36.12:0,36,504	0/0:29,0:28:78.26:0,78,1077	0/0:32,0:32:96.26:0,96,1226	0/0:24,0:24:72.22:0,72,974	0/0:23,0:22:69.22:0,69,949	0/0:18,0:18:54.17:0,54,739	0/0:36,0:36:99:0,108,1510	0/0:28,0:28:84.27:0,84,1158	0/0:34,0:34:99:0,102,1426	0/0:26,0:26:69.23:0,69,963	0/0:25,0:25:75.18:0,75,1026	0/0:22,0:22:66.22:0,66,923	0/0:24,0:24:72.24:0,72,1007	0/0:22,0:22:66.21:0,66,908	0/0:21,0:21:63.21:0,63,881	1/1:0,24:24:66.22:919,66,0	1/1:1,14:15:38.62:530,39,0	1/1:1,22:23:66.22:925,66,0	1/1:0,25:25:67.43:932,67,0	1/1:0,24:24:57.19:774,57,0	0/0:27,0:27:81.26:0,81,1115	0/0:35,0:35:99:0,105,1432	0/0:19,0:18:57.18:0,57,776	0/0:15,0:15:45.15:0,45,629	0/0:31,0:31:87.29:0,87,1217	0/0:42,0:42:99:0,120,1676	0/0:10,0:10:30.10:0,30,417
chr10	30290717	.	A	AT	2271.95	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=10.996;DP=611;FS=10.626;HRun=5;HaplotypeScore=72.6490;InbreedingCoeff=0.9983;MQ=64.33;MQ0=3;MQRankSum=-4.208;QD=29.89;ReadPosRankSum=-0.354;VQSLOD=3.3698;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:81.20:0,81,870	0/0:8,0:8:24.06:0,24,258	0/0:25,0:20:42.96:0,43,439	0/0:29,0:20:36.49:0,36,376	0/0:26,0:25:69.17:0,69,734	0/0:24,0:24:63.16:0,63,677	0/0:19,0:19:54.12:0,54,571	0/0:28,0:27:78.19:0,78,832	0/0:26,0:26:75.17:0,75,797	0/0:35,0:35:90.22:0,90,968	0/0:28,0:28:81.16:0,81,858	0/0:19,0:19:54.14:0,54,580	0/0:21,0:21:60.15:0,60,645	0/0:14,0:14:39.10:0,39,419	0/0:20,0:20:57.13:0,57,602	0/0:20,0:20:51.10:0,51,532	1/1:3,14:16:45.06:553,45,0	1/1:6,11:17:39.13:513,39,0	1/1:3,9:12:27.09:355,27,0	1/1:2,20:22:60.19:784,60,0	1/1:2,6:8:21.01:242,21,0	0/0:27,0:27:78.20:0,78,838	0/0:20,0:20:57.12:0,57,604	0/0:19,0:19:57.14:0,57,612	0/0:16,0:16:48.12:0,48,516	0/0:29,0:29:81.20:0,81,871	0/0:25,0:25:75.19:0,75,803	0/0:24,0:24:66.15:0,66,701
chr10	30290760	.	GGGA	G	2258.42	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=11.155;DP=593;FS=4.073;HRun=0;HaplotypeScore=104.6646;InbreedingCoeff=0.9915;MQ=73.94;MQ0=0;MQRankSum=-9.326;QD=36.43;ReadPosRankSum=1.193;VQSLOD=4.2696;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:66.22:0,66,1403	0/0:13,0:13:36.11:0,36,737	0/0:39,0:33:70.41:0,70,1151	0/0:25,0:20:23.72:0,24,516	0/0:23,0:23:69.22:0,69,1418	0/0:18,0:18:45.14:0,45,925	0/0:22,0:22:66.21:0,66,1353	0/0:28,0:27:75.23:0,75,1517	0/0:24,0:24:72.25:0,72,1519	0/0:36,0:36:96.31:0,96,2006	0/0:37,0:36:99:0,102,2127	0/0:16,0:16:45.15:0,45,964	0/0:21,0:21:63.20:0,63,1262	0/0:20,0:20:54.15:0,54,1036	0/0:21,0:21:63.19:0,63,1248	0/0:17,0:17:48.15:0,48,949	1/1:0,9:9:27.09:446,27,0	1/1:3,7:10:29.91:419,30,0	1/1:3,6:8:15.05:248,15,0	1/1:5,20:25:72.23:1114,72,0	1/1:2,7:9:15.01:204,15,0	0/0:22,0:22:63.17:0,63,1251	0/0:23,0:23:60.19:0,60,1260	0/0:19,0:19:51.16:0,51,1065	0/0:16,0:16:45.10:0,45,908	0/0:22,0:22:63.20:0,63,1273	0/0:35,0:35:99:0,102,2169	0/0:10,0:10:30.10:0,30,649
chr10	30291013	.	CT	C	1445.96	PASS	AB=0.919;AC=12;AF=0.214;AN=56;BaseQRankSum=10.313;DP=544;FS=0.975;HRun=10;HaplotypeScore=51.7126;InbreedingCoeff=0.7664;MQ=74.38;MQ0=0;MQRankSum=0.526;QD=11.48;ReadPosRankSum=0.537;VQSLOD=2.6677;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:87.22:0,87,947	0/0:8,0:8:21.06:0,21,232	0/1:14,1:15:8.60:9,0,200	0/0:10,1:11:8.39:0,8,71	0/0:28,0:29:75.01:0,75,788	0/0:25,0:25:46.15:0,46,737	0/0:11,0:11:27.07:0,27,299	0/1:24,3:27:12.02:12,0,548	0/0:13,0:13:36.10:0,36,398	0/0:34,1:35:61.38:0,61,903	0/0:22,2:25:19.92:0,20,659	0/0:10,1:11:7.02:0,7,298	0/0:24,0:24:69.19:0,69,763	0/0:21,0:21:60.14:0,60,644	0/0:19,0:19:54.14:0,54,591	0/0:12,2:13:10.04:0,10,339	1/1:1,13:14:38.98:339,39,0	1/1:2,8:10:23.99:208,24,0	1/1:8,14:22:41.94:354,42,0	1/1:2,21:23:56.97:495,57,0	1/1:2,13:15:23.99:208,24,0	0/0:22,0:22:54.14:0,54,590	0/0:18,0:18:42.10:0,42,456	0/0:14,0:14:36.10:0,36,398	0/0:24,0:25:72.01:0,72,769	0/0:21,0:21:60.16:0,60,664	0/0:27,0:26:71.77:0,72,766	0/0:16,0:16:48.13:0,48,531
chr10	30293246	.	A	ATT	2896.05	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=12.035;DP=543;FS=6.343;HRun=7;HaplotypeScore=71.5129;InbreedingCoeff=0.9919;MQ=67.23;MQ0=0;MQRankSum=-4.417;QD=32.91;ReadPosRankSum=0.068;VQSLOD=3.4367;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:42.12:0,42,489	0/0:5,0:5:15:0,15,150	0/0:12,0:11:24.06:0,24,274	0/0:14,0:14:23.61:0,24,228	0/0:32,0:32:93.27:0,93,1084	0/0:27,0:26:75.19:0,75,863	0/0:19,0:19:54.14:0,54,618	0/0:23,0:23:60.17:0,60,699	0/0:23,0:23:60.17:0,60,699	0/0:27,0:27:60.15:0,60,692	0/0:33,0:33:81.23:0,81,944	0/0:18,0:18:51.15:0,51,594	0/0:22,0:22:66.20:0,66,769	0/0:17,0:17:51.15:0,51,594	0/0:18,0:18:48.12:0,48,548	0/0:11,0:11:27.08:0,27,315	1/1:7,15:22:48.12:755,48,0	1/1:1,8:9:21.83:379,22,0	1/1:7,14:20:39.06:538,39,0	1/1:3,20:25:66.16:1008,66,0	1/1:2,7:9:24.08:391,24,0	0/0:21,0:21:60.17:0,60,690	0/0:27,0:27:75.22:0,75,874	0/0:16,0:16:48.13:0,48,548	0/0:16,0:16:42.11:0,42,489	0/0:35,0:35:99:0,102,1189	0/0:18,0:18:54.15:0,54,618	0/0:7,0:7:18.04:0,18,198
chr10	30293456	.	C	CTTT	4016.45	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-9.077;DP=480;FS=16.360;HRun=1;HaplotypeScore=64.9738;InbreedingCoeff=0.9979;MQ=73.99;MQ0=0;MQRankSum=-4.615;QD=61.79;ReadPosRankSum=0.991;VQSLOD=2.4957;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:51.08:0,51,848	0/0:11,0:11:33.11:0,33,607	0/0:17,0:17:48.16:0,48,888	0/0:16,0:16:37.68:0,38,664	0/0:15,0:15:42.14:0,42,783	0/0:27,0:27:81.26:0,81,1478	0/0:13,0:13:36.12:0,36,663	0/0:27,0:27:81.27:0,81,1470	0/0:22,0:22:63.22:0,63,1174	0/0:26,0:26:75.25:0,75,1366	0/0:12,0:12:36.12:0,36,666	0/0:12,0:12:36.12:0,36,671	0/0:27,0:27:81.25:0,81,1438	0/0:18,0:18:51.17:0,51,950	0/0:21,0:21:51.17:0,51,951	0/0:16,0:16:42.14:0,42,783	1/1:1,10:11:30.10:738,30,0	1/1:0,8:8:21.07:517,21,0	1/1:1,16:17:42.14:1035,42,0	1/1:2,16:20:54.06:1135,54,0	1/1:0,8:9:24.08:592,24,0	0/0:13,0:13:36.12:0,36,671	0/0:13,0:13:36.11:0,36,640	0/0:9,0:9:27.09:0,27,494	0/0:12,0:12:36.12:0,36,671	0/0:27,0:27:78.25:0,78,1397	0/0:27,0:27:81.26:0,81,1439	0/0:15,0:15:42.14:0,42,783
chr10	30293640	.	TTG	T	660.64	PASS	AB=0.902;AC=22;AF=0.423;AN=52;BaseQRankSum=4.449;DP=551;FS=0.717;HRun=0;HaplotypeScore=73.1216;InbreedingCoeff=-0.2003;MQ=60.42;MQ0=17;MQRankSum=-1.007;QD=1.93;ReadPosRankSum=0.702;VQSLOD=1.6521;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:22:11.76:0,12,161	0/1:11,0:11:17.48:17,0,157	./.	./.	0/1:29,6:35:84.96:85,0,397	0/1:18,1:19:71.68:72,0,124	0/0:8,0:8:9.02:0,9,116	0/0:26,0:25:5.96:0,6,44	0/1:13,4:16:20.66:21,0,114	0/1:23,1:23:59.26:59,0,166	0/1:12,2:11:17.69:18,0,163	0/1:13,2:16:31.62:32,0,90	0/0:19,0:19:12.03:0,12,146	0/0:16,0:16:15.05:0,15,215	0/0:14,0:14:12.04:0,12,171	0/0:16,0:17:26.70:0,27,355	1/1:9,0:13:14.16:69,14,0	0/1:16,4:22:46:121,0,46	1/1:13,2:15:6.02:65,6,0	1/1:18,0:22:2.84:15,3,0	1/1:18,0:23:5.68:28,6,0	0/1:19,1:20:40.91:41,0,162	0/0:23,0:23:4.33:0,4,267	0/1:23,1:24:2.18:2,0,319	0/1:15,2:17:50.16:50,0,117	0/1:19,2:21:40.25:40,0,45	0/1:14,3:17:67.47:67,0,269	0/1:10,1:11:17.47:17,0,163
chr10	30294182	.	G	GT	14537.01	PASS	AC=52;AF=0.963;AN=54;BaseQRankSum=-0.497;DP=459;FS=2.333;HRun=1;HaplotypeScore=254.9934;InbreedingCoeff=0.5335;MQ=31.29;MQ0=0;MQRankSum=1.407;QD=32.02;ReadPosRankSum=4.844;VQSLOD=4.1960;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,18:24:52.97:651,53,0	1/1:3,12:15:37.54:485,38,0	./.	0/0:2,0:1:2.22:0,2,7	1/1:5,26:31:61.09:934,61,0	1/1:3,17:19:57.14:723,57,0	1/1:3,7:10:19.17:249,19,0	1/1:12,27:38:99:1251,105,0	1/1:0,12:12:36.12:473,36,0	1/1:3,18:21:60.07:729,60,0	1/1:4,20:25:51.44:721,51,0	1/1:0,8:8:24.07:306,24,0	1/1:2,18:20:46.97:682,47,0	1/1:4,12:16:48.02:557,48,0	1/1:3,15:18:45.09:553,45,0	1/1:2,9:11:32.99:388,33,0	1/1:2,7:9:21.02:260,21,0	1/1:2,3:4:5.98:60,6,0	1/1:6,6:11:28.31:301,28,0	1/1:5,24:29:75.18:966,75,0	1/1:2,1:1:3.01:35,3,0	1/1:3,15:18:47.19:608,47,0	1/1:3,19:22:57.10:695,57,0	1/1:1,9:11:21.47:290,21,0	1/1:3,8:11:30.02:356,30,0	1/1:6,24:30:78.02:947,78,0	1/1:3,23:26:78.23:1005,78,0	1/1:0,8:8:24.08:315,24,0
chr10	30294200	.	G	GA	15765.88	PASS	AB=1.000;AC=55;AF=0.982;AN=56;BaseQRankSum=0.967;DP=463;FS=3.090;HRun=3;HaplotypeScore=225.2250;InbreedingCoeff=-0.0167;MQ=43.01;MQ0=0;MQRankSum=-1.723;QD=34.05;ReadPosRankSum=1.543;VQSLOD=3.7115;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,20:23:57.04:734,57,0	1/1:1,12:13:36.12:502,36,0	1/1:4,1:5:5.50:47,6,0	0/1:3,0:3:18.48:22,0,18	1/1:2,29:31:84.19:1123,84,0	1/1:3,17:20:45.15:627,45,0	1/1:2,9:11:24.08:334,24,0	1/1:2,37:39:99:1489,111,0	1/1:1,14:15:39.13:543,39,0	1/1:0,21:21:60.20:838,60,0	1/1:3,22:25:63.21:875,63,0	1/1:0,10:10:27.09:376,27,0	1/1:2,18:20:51.17:710,51,0	1/1:2,12:14:33.11:460,33,0	1/1:2,13:15:30.10:418,30,0	1/1:1,9:10:24.08:335,24,0	1/1:3,10:13:30.07:396,30,0	1/1:2,4:6:12.03:151,12,0	1/1:0,7:7:18.06:251,18,0	1/1:4,24:28:72.24:1002,72,0	1/1:1,5:6:9.03:125,9,0	1/1:2,16:18:48.16:662,48,0	1/1:1,23:24:66.22:917,66,0	1/1:4,7:11:21.07:292,21,0	1/1:1,8:9:24.08:333,24,0	1/1:5,25:30:60.20:831,60,0	1/1:3,25:28:75.25:1039,75,0	1/1:0,8:8:24.08:335,24,0
chr10	30295178	.	T	TAC	2118.05	PASS	AB=0.786;AC=10;AF=0.179;AN=56;BaseQRankSum=10.813;DP=466;FS=11.827;HRun=0;HaplotypeScore=67.8934;InbreedingCoeff=0.6873;MQ=64.85;MQ0=4;MQRankSum=-0.927;QD=18.91;ReadPosRankSum=-0.901;VQSLOD=2.8033;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:25.22:0,25,556	0/0:6,0:6:18.06:0,18,218	0/1:19,0:9:18.98:19,0,21	0/0:11,0:9:5.96:0,6,49	0/0:21,0:21:57.16:0,57,679	0/0:21,0:21:57.14:0,57,666	0/0:8,0:8:11.99:0,12,108	0/0:42,0:42:51.97:0,52,682	0/0:16,0:16:45.06:0,45,482	0/0:13,0:14:38.95:0,39,451	0/0:19,0:19:42.10:0,42,484	0/0:11,0:11:24.03:0,24,264	0/0:8,0:8:18.06:0,18,218	0/0:15,0:15:36.02:0,36,372	0/0:13,0:13:33.05:0,33,352	0/0:18,0:18:51.12:0,51,583	1/1:2,14:16:30.10:480,30,0	0/1:3,9:12:12.46:250,0,12	1/1:7,13:19:40.54:500,41,0	1/1:11,13:25:48.13:714,48,0	1/1:7,13:20:8.92:319,9,0	0/0:11,0:11:17.93:0,18,184	0/0:11,0:11:26.79:0,27,302	0/0:7,0:7:18.02:0,18,193	0/0:21,0:21:57.15:0,57,668	0/0:19,0:19:48.10:0,48,533	0/0:27,0:27:66.12:0,66,736	0/0:14,0:13:3.53:0,4,295
chr10	30296171	.	CT	C	3441.89	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=15.790;DP=759;FS=0.783;HRun=6;HaplotypeScore=78.7982;InbreedingCoeff=0.9988;MQ=80.26;MQ0=0;MQRankSum=-0.865;QD=29.42;ReadPosRankSum=0.132;VQSLOD=4.0738;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,138,1752	0/0:10,0:10:27.07:0,27,341	0/0:21,0:21:53.88:0,54,645	0/0:16,0:16:42.08:0,42,495	0/0:43,0:43:99:0,129,1650	0/0:18,0:18:54.17:0,54,698	0/0:16,0:16:48.14:0,48,617	0/0:30,0:30:69.22:0,69,908	0/0:36,0:36:99:0,102,1328	0/0:39,0:39:99:0,114,1441	0/0:27,0:27:78.25:0,78,1026	0/0:22,0:22:60.17:0,60,758	0/0:47,0:47:99:0,132,1704	0/0:24,0:24:63.15:0,63,779	0/0:28,0:28:84.26:0,84,1090	0/0:30,0:30:84.27:0,84,1105	1/1:0,23:23:66.16:705,66,0	1/1:0,8:8:24.06:256,24,0	1/1:4,22:26:60.21:655,60,0	1/1:0,35:35:99:1126,105,0	1/1:4,21:25:66.15:700,66,0	0/0:37,0:37:99:0,102,1297	0/0:33,0:33:93.29:0,93,1209	0/0:28,0:28:72.18:0,72,914	0/0:17,0:17:48.16:0,48,631	0/0:26,0:26:75.24:0,75,986	0/0:36,0:35:99:0,102,1325	0/0:9,0:9:24.08:0,24,316
chr10	30297020	.	C	CCT	4464.79	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-11.762;DP=637;FS=0.894;HRun=0;HaplotypeScore=76.1140;InbreedingCoeff=0.9975;MQ=79.11;MQ0=4;MQRankSum=-1.067;QD=39.86;ReadPosRankSum=1.021;VQSLOD=6.8357;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:87.27:0,87,1198	0/0:6,0:6:18.05:0,18,236	0/0:17,0:17:26.37:0,26,374	0/0:24,0:22:44.29:0,44,537	0/0:27,0:27:78.24:0,78,1072	0/0:19,0:19:54.15:0,54,722	0/0:10,0:10:27.09:0,27,378	0/0:31,0:31:90.29:0,90,1226	0/0:16,0:16:42.13:0,42,571	0/0:27,0:27:75.25:0,75,1036	0/0:21,0:21:54.15:0,54,722	0/0:30,0:30:84.23:0,84,1111	0/0:26,0:26:75.25:0,75,1050	0/0:24,0:24:69.21:0,69,947	0/0:19,0:19:51.17:0,51,713	0/0:21,0:21:60.20:0,60,840	1/1:1,24:24:60.21:1080,60,0	1/1:1,16:19:42.14:756,42,0	1/1:4,14:18:42.14:757,42,0	1/1:1,25:26:57.19:1007,57,0	1/1:2,20:21:48.16:865,48,0	0/0:17,0:17:48.14:0,48,639	0/0:28,0:28:78.26:0,78,1092	0/0:25,0:25:72.21:0,72,973	0/0:22,0:22:57.19:0,57,795	0/0:35,0:35:96.31:0,96,1329	0/0:40,0:39:99:0,114,1589	0/0:10,0:10:30.10:0,30,420
chr10	30297955	.	G	GTATA	1660.97	PASS	AB=0.824;AC=10;AF=0.179;AN=56;BaseQRankSum=-6.234;DP=420;FS=6.268;HRun=0;HaplotypeScore=66.5530;InbreedingCoeff=0.7426;MQ=64.15;MQ0=0;MQRankSum=1.022;QD=30.20;ReadPosRankSum=1.430;VQSLOD=2.6989;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,2:41:21.11:0,21,1366	0/0:8,0:8:18.06:0,18,290	0/1:1,0:1:0:0,0,0	0/0:6,0:5:2.84:0,3,40	0/0:22,0:22:39:0,39,599	0/0:13,0:13:39.13:0,39,656	0/0:12,0:12:30.07:0,30,452	0/0:40,0:40:84.23:0,84,1297	0/0:9,0:9:18.05:0,18,281	0/0:23,0:24:57.18:0,57,924	0/0:20,0:21:53.36:0,53,790	0/0:13,0:13:36.12:0,36,614	0/0:18,0:18:51.13:0,51,803	0/0:10,0:10:21.03:0,21,317	0/0:15,0:15:36.11:0,36,587	0/0:15,0:15:27.06:0,27,395	1/1:2,7:10:11.83:238,12,0	1/1:0,15:16:30.10:751,30,0	1/1:5,7:13:21.07:481,21,0	0/1:5,5:11:36.08:286,0,36	1/1:3,0:4:5.81:58,6,0	0/0:6,0:6:15.04:0,15,229	0/0:9,0:9:15.05:0,15,252	0/0:5,0:5:15.04:0,15,229	0/0:12,0:12:27.09:0,27,456	0/0:29,0:29:72.25:0,72,1223	0/0:33,0:33:72.24:0,72,1218	0/0:4,0:4:12.04:0,12,204
chr10	30299281	.	C	CCTGCGCAGCT	4108.52	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-1.348;DP=748;FS=15.158;HRun=0;HaplotypeScore=215.9138;InbreedingCoeff=0.9449;MQ=66.98;MQ0=6;MQRankSum=-8.139;QD=52.67;ReadPosRankSum=-3.048;VQSLOD=1.6350;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:60,0:60:99:0,178,5513	0/0:7,0:7:21.07:0,21,603	0/0:13,0:11:19.11:0,19,750	0/0:23,0:21:63.10:0,63,1930	0/0:21,0:21:60.21:0,60,1960	0/0:22,0:22:66.23:0,66,2157	0/0:48,0:48:99:0,144,4603	0/0:33,0:32:90.31:0,90,2841	0/0:20,0:20:60.21:0,60,2001	0/0:35,0:35:99:0,105,3291	0/0:15,0:15:42.13:0,42,1312	0/0:50,0:50:99:0,141,4235	0/0:41,0:41:99:0,114,3625	0/0:35,0:35:99:0,99,3112	0/0:35,0:35:99:0,102,3282	0/0:29,0:29:84.27:0,84,2717	1/1:7,3:13:9.03:313,9,0	1/1:3,6:9:9.03:479,9,0	1/1:11,8:18:51.17:2078,51,0	1/1:7,6:14:15.05:761,15,0	1/1:12,4:18:9.03:478,9,0	0/0:28,0:28:78.27:0,78,2519	0/0:21,0:21:63.22:0,63,2026	0/0:65,0:65:99:0,178,5504	0/0:22,0:22:63.22:0,63,1991	0/0:19,0:19:54.19:0,54,1709	0/0:24,0:24:69.22:0,69,2169	0/0:4,0:4:12.04:0,12,363
chr10	30301875	.	G	GA	3025.33	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-9.796;DP=784;FS=2.352;HRun=8;HaplotypeScore=76.4036;InbreedingCoeff=0.9952;MQ=74.14;MQ0=0;MQRankSum=-0.835;QD=26.54;ReadPosRankSum=-0.662;VQSLOD=4.0878;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,105,961	0/0:16,0:16:42.01:0,42,384	0/0:19,0:17:18.36:0,18,223	0/0:16,0:16:28.13:0,28,239	0/0:41,0:41:99:0,108,984	0/0:42,0:42:99:0,120,1086	0/0:22,0:22:54.01:0,54,493	0/0:26,0:26:63.02:0,63,577	0/0:27,0:28:77.05:0,77,687	0/0:39,0:39:99:0,105,961	0/0:21,0:21:48.01:0,48,439	0/0:33,0:34:86.06:0,86,770	0/0:39,0:39:99:0,108,988	0/0:23,0:23:59.06:0,59,528	0/0:39,0:39:99:0,99,906	0/0:23,0:23:66.01:0,66,596	1/1:2,30:32:81.24:934,81,0	1/1:1,7:8:18.02:194,18,0	1/1:5,15:20:45.13:519,45,0	1/1:2,30:32:81.24:930,81,0	1/1:1,21:22:54.16:623,54,0	0/0:52,0:52:99:0,132,1203	0/0:27,1:28:46.39:0,46,668	0/0:20,0:20:48.02:0,48,439	0/0:32,0:32:93.05:0,93,851	0/0:31,0:31:84.04:0,84,769	0/0:35,0:34:96.01:0,96,866	0/0:9,0:9:21.01:0,21,192
chr10	30302153	.	A	AT	5008.86	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-13.413;DP=771;FS=5.951;HRun=1;HaplotypeScore=73.5956;InbreedingCoeff=1.0000;MQ=80.32;MQ0=1;MQRankSum=-2.713;QD=41.40;ReadPosRankSum=0.410;VQSLOD=5.2313;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:99:0,99,1282	0/0:16,0:16:48.14:0,48,609	0/0:30,0:28:84.16:0,84,1029	0/0:35,0:32:90.22:0,90,1103	0/0:30,0:30:81.26:0,81,1051	0/0:26,0:26:72.21:0,72,904	0/0:25,0:25:72.22:0,72,919	0/0:34,0:34:93.29:0,93,1184	0/0:28,0:28:84.26:0,84,1075	0/0:27,0:27:81.24:0,81,1014	0/0:26,0:26:72.22:0,72,920	0/0:27,0:27:75.24:0,75,970	0/0:31,0:31:93.30:0,93,1206	0/0:28,0:28:78.25:0,78,1012	0/0:30,0:30:84.27:0,84,1091	0/0:31,0:31:93.28:0,93,1182	1/1:0,24:24:66.22:989,66,0	1/1:1,17:18:47.91:718,48,0	1/1:0,22:22:66.21:968,66,0	1/1:0,32:32:96.25:1390,96,0	1/1:1,24:25:63.21:944,63,0	0/0:42,0:42:99:0,120,1542	0/0:25,0:25:75.23:0,75,961	0/0:16,0:16:48.16:0,48,622	0/0:22,0:22:66.21:0,66,857	0/0:32,0:32:93.27:0,93,1169	0/0:41,0:41:99:0,114,1447	0/0:15,0:15:45.15:0,45,584
chr10	30302950	.	AAAAAAC	A	2672.79	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=9.421;DP=574;FS=4.592;HRun=0;HaplotypeScore=121.4641;InbreedingCoeff=0.9553;MQ=66.04;MQ0=0;MQRankSum=-5.197;QD=24.08;ReadPosRankSum=-1.608;VQSLOD=3.0352;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:82.70:0,83,2175	0/0:15,0:15:42.11:0,42,1172	0/0:11,0:7:15.04:0,15,361	0/0:22,0:18:9.94:0,10,453	0/0:30,0:30:76.05:0,76,1904	0/0:12,0:12:32.93:0,33,762	0/0:13,0:13:36.11:0,36,1056	0/0:35,0:35:87.59:0,88,2231	0/0:15,0:15:39.13:0,39,1222	0/0:24,0:24:69.20:0,69,1765	0/0:32,0:32:92.77:0,93,2289	0/0:20,0:20:60.18:0,60,1752	0/0:14,0:14:33.11:0,33,946	0/0:22,0:22:65.18:0,65,1554	0/0:28,0:28:61.09:0,61,2235	0/0:22,0:22:63.17:0,63,1497	1/1:4,25:29:30.01:539,30,0	1/1:1,11:12:8.71:182,9,0	1/1:5,17:22:53.30:777,53,0	1/1:7,28:35:56.05:1130,56,0	1/1:3,10:13:11.63:214,12,0	0/0:18,0:18:45.02:0,45,1294	0/0:20,0:20:48.02:0,48,1215	0/0:12,0:12:36.09:0,36,1017	0/0:23,0:23:60.19:0,60,1629	0/0:22,0:22:60.16:0,60,1573	0/0:19,0:19:52.37:0,52,1324	0/0:5,0:5:12.02:0,12,299
chr10	30303517	.	C	CA	3846.80	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=10.891;DP=676;FS=6.286;HRun=5;HaplotypeScore=70.0268;InbreedingCoeff=0.9960;MQ=81.12;MQ0=0;MQRankSum=-3.024;QD=34.97;ReadPosRankSum=1.283;VQSLOD=3.7705;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:98.71:0,99,1119	0/0:9,0:9:18.04:0,18,193	0/0:19,0:19:39.13:0,39,494	0/0:20,0:20:18.01:0,18,308	0/0:34,0:34:93.23:0,93,997	0/0:27,0:27:81.20:0,81,870	0/0:21,0:21:57.12:0,57,603	0/0:30,0:30:75.17:0,75,800	0/0:22,0:22:63.16:0,63,677	0/0:24,0:24:69.17:0,69,742	0/0:26,0:26:75.17:0,75,797	0/0:28,0:28:72.16:0,72,765	0/0:25,0:25:66.14:0,66,700	0/0:15,0:15:42.10:0,42,451	0/0:27,0:27:78.16:0,78,825	0/0:20,0:20:48.09:0,48,505	1/1:0,27:27:78.25:1026,78,0	1/1:4,10:14:27.05:336,27,0	1/1:2,14:16:42.14:550,42,0	1/1:1,30:31:87.20:1105,87,0	1/1:0,22:22:63.20:829,63,0	0/0:26,0:26:72.16:0,72,766	0/0:29,0:29:78.06:0,78,821	0/0:30,0:30:81.18:0,81,860	0/0:28,0:28:69.13:0,69,723	0/0:22,0:22:66.16:0,66,703	0/0:29,0:29:81.17:0,81,852	0/0:17,0:17:51.08:0,51,528
chr10	30304291	.	G	GTCTC	3099.38	PASS	AB=0.877;AC=13;AF=0.232;AN=56;BaseQRankSum=-2.201;DP=727;FS=1.029;HRun=0;HaplotypeScore=134.6697;InbreedingCoeff=0.4928;MQ=70.41;MQ0=11;MQRankSum=-1.810;QD=9.78;ReadPosRankSum=-1.432;VQSLOD=2.8612;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:39,0:41:28.34:28,0,941	0/0:7,0:8:15.03:0,15,199	0/1:46,0:21:15.98:21,0,16	0/1:73,0:37:46.16:46,0,198	0/0:19,0:20:30.07:0,30,437	0/0:22,0:23:45.10:0,45,648	0/0:20,0:22:42.05:0,42,589	0/0:25,0:25:9.55:0,10,187	0/0:18,0:21:38.76:0,39,499	0/0:22,0:24:42.11:0,42,591	0/0:15,0:15:21.07:0,21,337	0/1:14,0:22:20.45:83,0,20	0/0:26,0:26:54.15:0,54,810	0/0:21,0:23:42.12:0,42,611	0/0:21,0:21:39.12:0,39,602	0/0:20,0:20:36.08:0,36,527	1/1:7,20:31:44.89:1022,45,0	1/1:5,10:20:32.32:580,32,0	1/1:15,5:23:29.62:515,30,0	1/1:18,5:26:38.57:655,39,0	0/1:15,14:32:30.22:327,0,30	0/0:21,0:23:33.08:0,33,456	0/0:21,0:23:48.09:0,48,678	0/0:22,0:23:32.62:0,33,448	0/0:17,0:19:21.05:0,21,295	0/0:25,0:29:46.33:0,46,651	0/0:28,0:28:54.18:0,54,867	0/0:12,0:15:24.06:0,24,316
chr10	30304381	.	CTGTGTGTG	C	8366.23	PASS	AB=0.739;AC=44;AF=0.880;AN=50;BaseQRankSum=2.341;DP=671;FS=12.932;HRun=0;HaplotypeScore=197.7504;InbreedingCoeff=-0.0479;MQ=54.87;MQ0=13;MQRankSum=-1.644;QD=14.16;ReadPosRankSum=-1.849;VQSLOD=2.9592;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:22,16:39:11.62:236,12,0	1/1:5,3:10:15.05:337,15,0	./.	./.	0/1:12,16:29:23.71:311,0,24	1/1:14,14:28:6.14:617,6,0	1/1:22,3:29:15.05:308,15,0	0/0:33,0:29:0:0,0,0	1/1:11,10:22:27.09:640,27,0	1/1:29,1:33:6.13:182,6,0	1/1:9,2:13:6.02:131,6,0	1/1:24,12:38:20.68:472,21,0	1/1:10,3:19:27.07:507,27,0	0/1:22,5:31:9.36:453,0,9	1/1:17,10:28:27.09:652,27,0	1/1:21,11:36:24.44:496,24,0	1/1:17,0:20:4.60:160,5,0	1/1:15,0:17:5.86:97,6,0	1/1:21,0:21:2.88:56,3,0	1/1:3,0:13:27.07:406,27,0	0/1:22,0:24:26.21:51,0,26	0/1:12,11:25:22.67:338,0,23	1/1:7,4:11:3.01:75,3,0	1/1:20,8:28:12.80:251,13,0	1/1:14,6:19:9.03:218,9,0	1/1:13,9:22:26.43:533,26,0	1/1:13,12:27:36.02:843,36,0	./.
chr10	30305298	.	CTCT	C	4966.39	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=12.476;DP=711;FS=4.049;HRun=0;HaplotypeScore=107.2069;InbreedingCoeff=0.9962;MQ=87.90;MQ0=0;MQRankSum=-4.918;QD=37.91;ReadPosRankSum=3.239;VQSLOD=6.0727;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,141,3109	0/0:16,0:16:48.14:0,48,934	0/0:33,0:33:54.92:0,55,1426	0/0:33,0:32:68.41:0,68,1229	0/0:26,0:26:69.20:0,69,1400	0/0:17,0:17:45.15:0,45,990	0/0:28,0:28:75.24:0,75,1612	0/0:35,0:34:93.30:0,93,1885	0/0:14,0:14:42.14:0,42,885	0/0:31,0:31:93.31:0,93,1988	0/0:21,0:21:57.19:0,57,1183	0/0:28,0:28:78.26:0,78,1658	0/0:28,0:28:81.26:0,81,1741	0/0:17,0:17:45.15:0,45,949	0/0:19,0:19:51.17:0,51,1102	0/0:26,0:26:69.24:0,69,1499	1/1:3,41:44:99:1590,99,0	1/1:1,13:14:30.10:482,30,0	1/1:2,15:17:45.13:677,45,0	1/1:0,26:26:66.22:1060,66,0	1/1:1,29:30:72.25:1157,72,0	0/0:24,0:24:69.22:0,69,1481	0/0:19,0:19:42.14:0,42,921	0/0:25,0:24:72.25:0,72,1563	0/0:27,0:27:81.26:0,81,1742	0/0:20,0:20:60.20:0,60,1287	0/0:35,0:34:99:0,102,2222	0/0:9,0:9:15.05:0,15,330
chr10	30306138	.	T	TA	4561.24	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=15.029;DP=767;FS=8.136;HRun=1;HaplotypeScore=88.6070;InbreedingCoeff=0.9999;MQ=92.74;MQ0=0;MQRankSum=-0.914;QD=46.07;ReadPosRankSum=0.239;VQSLOD=3.4416;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:90.30:0,90,1254	0/0:10,0:10:30.10:0,30,419	0/0:31,0:31:93.30:0,93,1286	0/0:33,0:33:90.29:0,90,1216	0/0:28,0:28:84.26:0,84,1157	0/0:27,0:27:81.27:0,81,1132	0/0:34,0:34:99:0,99,1366	0/0:27,0:27:78.26:0,78,1090	0/0:28,0:28:84.27:0,84,1158	0/0:43,0:43:99:0,129,1762	0/0:21,0:21:60.20:0,60,839	0/0:29,0:29:87.28:0,87,1198	0/0:32,0:32:96.28:0,96,1287	0/0:34,0:34:99:0,102,1426	0/0:33,0:33:99:0,99,1385	0/0:36,0:36:99:0,108,1510	1/1:2,21:22:66.23:1054,66,0	1/1:1,15:16:45.15:714,45,0	1/1:1,21:22:65.96:1019,66,0	1/1:1,20:21:60.20:959,60,0	1/1:0,17:17:51.17:815,51,0	0/0:28,0:28:81.25:0,81,1111	0/0:22,0:22:60.20:0,60,839	0/0:28,0:28:75.25:0,75,1049	0/0:25,0:25:72.24:0,72,1007	0/0:47,0:47:99:0,135,1889	0/0:27,0:27:81.27:0,81,1133	0/0:15,0:15:45.15:0,45,629
chr10	30307096	.	GA	G	3614.91	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=13.346;DP=668;FS=0.412;HRun=2;HaplotypeScore=80.0657;InbreedingCoeff=0.9993;MQ=88.64;MQ0=1;MQRankSum=-6.473;QD=33.78;ReadPosRankSum=3.054;VQSLOD=3.9035;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:60.10:0,60,809	0/0:10,0:10:30.09:0,30,430	0/0:33,0:31:86.18:0,86,1095	0/0:27,0:27:79.40:0,79,893	0/0:26,0:26:72.24:0,72,1057	0/0:28,0:28:84.24:0,84,1199	0/0:27,0:27:75.24:0,75,1102	0/0:35,0:35:96.30:0,96,1386	0/0:26,0:26:78.26:0,78,1167	0/0:28,0:28:78.26:0,78,1168	0/0:18,0:18:54.17:0,54,790	0/0:29,0:29:87.29:0,87,1302	0/0:25,0:25:75.25:0,75,1124	0/0:15,0:15:45.14:0,45,656	0/0:30,0:30:90.28:0,90,1311	0/0:34,0:34:99:0,99,1465	1/1:0,30:30:69.22:891,69,0	1/1:0,13:13:36.12:466,36,0	1/1:0,20:20:57.19:740,57,0	1/1:0,18:18:48.16:623,48,0	1/1:0,26:26:69.22:896,69,0	0/0:12,0:12:36.08:0,36,480	0/0:15,0:15:42.10:0,42,570	0/0:26,0:26:75.20:0,75,1079	0/0:22,0:22:63.19:0,63,919	0/0:34,0:34:93.31:0,93,1391	0/0:33,0:33:99:0,99,1443	0/0:8,0:8:24.08:0,24,360
chr10	30307214	.	GTTT	G	1676.16	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=11.010;DP=544;FS=21.955;HRun=7;HaplotypeScore=99.8199;InbreedingCoeff=0.8667;MQ=65.27;MQ0=5;MQRankSum=-7.725;QD=19.95;ReadPosRankSum=-1.081;VQSLOD=-0.0877;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:63:0,63,1279	0/0:5,0:5:12.04:0,12,248	0/0:33,0:17:30.29:0,30,277	0/1:21,0:14:33.56:34,0,122	0/0:22,0:22:57.15:0,57,923	0/0:22,0:22:57.20:0,57,1204	0/0:15,0:15:39.13:0,39,739	0/0:45,0:45:99:0,114,2081	0/0:14,0:14:42.14:0,42,826	0/0:22,0:22:63.22:0,63,1314	0/0:21,0:21:63.16:0,63,1213	0/0:19,0:19:57.18:0,57,1190	0/0:19,0:19:51.17:0,51,1044	0/0:19,0:19:57.19:0,57,1128	0/0:19,0:20:60.18:0,60,1135	0/0:18,0:18:50.82:0,51,943	1/1:0,8:8:21:273,21,0	1/1:5,1:6:18:201,18,0	1/1:13,5:18:30.04:346,30,0	1/1:11,15:26:68.91:864,69,0	1/1:4,1:5:10.25:133,10,0	0/0:12,0:12:27.09:0,27,529	0/0:13,0:13:39.13:0,39,766	0/0:21,0:21:54.11:0,54,1035	0/0:19,0:19:51.17:0,51,1050	0/0:32,0:32:90.29:0,90,1814	0/0:32,0:32:93.31:0,93,1865	0/0:10,0:10:27.09:0,27,556
chr10	30307217	.	T	TG	528.14	PASS	AB=0.946;AC=10;AF=0.179;AN=56;BaseQRankSum=8.824;DP=548;FS=25.461;HRun=0;HaplotypeScore=87.3478;InbreedingCoeff=0.6691;MQ=69.16;MQ0=5;MQRankSum=-8.130;QD=6.36;ReadPosRankSum=0.038;VQSLOD=1.2621;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:27:66.66:0,67,906	0/0:4,0:4:12.04:0,12,168	0/0:39,0:23:26.49:0,26,324	0/1:24,0:16:23.95:24,0,110	0/0:21,0:21:60.16:0,60,775	0/0:19,0:19:57.19:0,57,795	0/0:16,0:16:39.13:0,39,544	0/0:44,0:44:99:0,120,1594	0/0:15,0:15:45.11:0,45,567	0/0:23,0:23:63.21:0,63,876	0/0:21,0:21:63.16:0,63,843	0/0:19,0:19:57.18:0,57,780	0/0:20,0:20:57.16:0,57,748	0/0:19,0:19:57.18:0,57,777	0/0:21,0:21:63.18:0,63,812	0/0:17,0:17:51.14:0,51,666	1/1:8,0:8:0.11:31,0,0	1/1:2,4:6:12.58:162,13,0	1/1:11,3:15:13.83:179,14,0	0/1:22,3:25:10.54:157,0,11	1/1:2,3:5:13.01:126,13,0	0/0:10,0:10:27.09:0,27,377	0/0:13,0:13:39.13:0,39,544	0/0:22,0:22:57.12:0,57,726	0/0:19,0:19:54.17:0,54,739	0/0:30,0:30:90.28:0,90,1226	0/0:34,0:34:96.30:0,96,1308	0/0:11,0:11:33.08:0,33,426
chr10	30307239	.	T	TG	1479.88	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=8.885;DP=525;FS=27.840;HRun=4;HaplotypeScore=87.4992;InbreedingCoeff=0.9186;MQ=77.90;MQ0=0;MQRankSum=-8.299;QD=24.66;ReadPosRankSum=-0.287;VQSLOD=1.7333;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:45.13:0,45,506	0/0:7,0:7:21.06:0,21,238	0/0:29,0:27:48.83:0,49,647	0/0:23,1:21:30.63:0,31,354	0/0:16,0:16:33.09:0,33,374	0/0:22,0:22:59.98:0,60,645	0/0:13,0:13:33.08:0,33,364	0/0:42,0:42:93.26:0,93,1049	0/0:18,0:18:44.89:0,45,475	0/0:18,0:18:51.14:0,51,578	0/0:16,0:16:48.13:0,48,537	0/0:25,0:25:72.20:0,72,811	0/0:18,0:18:51.08:0,51,556	0/0:16,0:16:39:0,39,407	0/0:20,0:20:54.15:0,54,611	0/0:22,0:22:63.18:0,63,713	1/1:0,6:6:15.05:205,15,0	1/1:1,7:8:2.18:227,2,0	1/1:6,8:14:24.05:308,24,0	1/1:9,20:29:60.20:817,60,0	1/1:0,3:2:6.02:82,6,0	0/0:10,0:10:18.05:0,18,203	0/0:14,0:13:36.09:0,36,395	0/0:25,0:25:60.13:0,60,666	0/0:17,0:17:48.13:0,48,536	0/0:22,0:22:54.15:0,54,608	0/0:36,0:36:93.26:0,93,1049	0/0:14,0:14:36.10:0,36,407
chr10	30307299	.	T	TGA	1090.33	PASS	AC=6;AF=0.111;AN=54;BaseQRankSum=6.070;DP=534;FS=0.000;HRun=0;HaplotypeScore=87.6464;InbreedingCoeff=0.9267;MQ=72.20;MQ0=0;MQRankSum=-6.725;QD=30.29;ReadPosRankSum=-3.361;VQSLOD=4.0703;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:60:0,60,661	0/0:7,0:7:18.06:0,18,227	0/0:23,0:21:20.72:0,21,355	0/0:19,0:16:23.74:0,24,241	0/0:25,0:25:60.07:0,60,704	0/0:18,0:18:42.13:0,42,530	0/0:14,0:14:33.08:0,33,389	0/0:31,0:31:68.89:0,69,869	0/0:21,0:21:57.14:0,57,701	0/0:23,0:23:63.17:0,63,779	0/0:23,0:23:69.17:0,69,846	0/0:26,0:26:61.08:0,61,759	0/0:19,0:19:54.17:0,54,680	0/0:20,0:20:57.17:0,57,707	0/0:23,0:23:51.16:0,51,644	0/0:20,0:20:54.16:0,54,668	./.	1/1:2,3:5:12.04:195,12,0	1/1:5,4:9:18:242,18,0	1/1:5,16:22:54.13:789,54,0	0/0:2,0:1:0:0,0,0	0/0:15,0:15:42.12:0,42,517	0/0:22,0:22:54.17:0,54,681	0/0:28,0:28:75.23:0,75,932	0/0:20,0:20:57.17:0,57,706	0/0:26,0:26:69.14:0,69,812	0/0:41,0:40:96.31:0,96,1211	0/0:9,0:9:21.07:0,21,265
chr10	30307325	.	T	TA	1186.87	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=7.775;DP=576;FS=9.015;HRun=1;HaplotypeScore=91.6698;InbreedingCoeff=0.8825;MQ=60.29;MQ0=6;MQRankSum=-8.273;QD=37.09;ReadPosRankSum=-1.591;VQSLOD=2.6861;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,1:24:57.19:0,57,798	0/0:6,0:6:15.05:0,15,208	0/0:30,0:19:48.16:0,48,654	0/0:19,0:7:13.28:0,13,138	0/0:29,0:29:57.18:0,57,781	0/0:21,0:21:60.20:0,60,838	0/0:21,0:20:54.15:0,54,734	0/0:43,0:42:99:0,123,1672	0/0:21,0:21:60.20:0,60,839	0/0:25,0:25:75.25:0,75,1048	0/0:28,0:28:78.25:0,78,1076	0/0:25,0:25:69.23:0,69,951	0/0:23,0:23:60.20:0,60,834	0/0:24,0:24:69.10:0,69,932	0/0:19,0:19:48.16:0,48,671	0/0:17,0:17:51.15:0,51,695	1/1:1,2:3:3.01:48,3,0	1/1:0,3:3:9.03:144,9,0	1/1:1,11:11:33.11:525,33,0	1/1:0,14:14:39.13:616,39,0	0/0:0,1:1:0:0,0,0	0/0:17,0:17:48.16:0,48,670	0/0:23,0:23:59.75:0,60,839	0/0:26,0:26:66.15:0,66,906	0/0:24,0:24:66.22:0,66,921	0/0:26,0:26:78.26:0,78,1091	0/0:37,0:36:93.28:0,93,1334	0/0:13,0:12:24.08:0,24,333
chr10	30307341	.	TGATA	T	4013.79	PASS	AB=0.906;AC=32;AF=0.667;AN=48;BaseQRankSum=4.674;DP=491;FS=2.016;HRun=0;HaplotypeScore=102.2674;InbreedingCoeff=0.3615;MQ=56.44;MQ0=9;MQRankSum=2.274;QD=11.50;ReadPosRankSum=0.438;VQSLOD=2.8680;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:19,4:24:5.94:207,0,6	1/1:2,2:4:3.01:46,3,0	./.	./.	0/1:11,0:22:0:1,0,0	1/1:9,13:22:30.10:438,30,0	1/1:15,3:18:3.01:46,3,0	./.	0/1:17,1:18:30.56:31,0,262	1/1:9,13:22:39.13:587,39,0	1/1:15,5:20:18.06:272,18,0	1/1:9,8:17:18.06:274,18,0	1/1:11,8:20:12.03:182,12,0	1/1:14,7:21:18.06:274,18,0	./.	0/0:12,0:12:9.03:0,9,209	0/1:5,0:5:0:0,0,0	0/0:3,0:3:0.89:0,1,2	0/1:10,0:10:6.20:6,0,15	0/0:11,0:11:0:0,0,0	0/0:1,0:1:0:0,0,0	1/1:9,8:17:16.46:230,16,0	0/0:20,0:20:12.04:0,12,279	0/1:25,1:26:15.73:16,0,524	1/1:12,9:22:27.09:410,27,0	1/1:11,9:20:27.09:407,27,0	1/1:20,10:29:21.07:319,21,0	1/1:2,7:8:18.06:268,18,0
chr10	30307391	.	ATAGATAGTCATG	A	549.59	PASS	AC=8;AF=0.148;AN=54;BaseQRankSum=6.666;DP=483;FS=19.187;HRun=0;HaplotypeScore=184.4569;InbreedingCoeff=0.8974;MQ=58.19;MQ0=8;MQRankSum=-4.597;QD=18.32;ReadPosRankSum=-2.055;VQSLOD=1.3801;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:23:50.04:0,50,1423	0/0:7,0:7:21.07:0,21,580	0/0:12,0:8:23.67:0,24,590	0/0:13,0:7:21.07:0,21,558	0/0:27,0:27:43.49:0,43,1453	0/0:27,0:27:69.23:0,69,2049	0/0:17,0:16:36.11:0,36,1141	0/0:36,0:31:93.22:0,93,2235	0/0:12,0:12:24.07:0,24,987	0/0:26,0:25:76.50:0,76,2364	0/0:19,0:19:54.17:0,54,1515	0/0:18,0:18:48.15:0,48,1400	0/0:19,0:19:39.11:0,39,1177	0/0:17,0:17:45.15:0,45,1360	0/0:14,0:14:30.10:0,30,991	0/0:17,0:17:48.16:0,48,1936	1/1:1,6:7:0.47:1,0,0	1/1:4,0:4:8.96:129,9,0	1/1:7,0:7:16.86:349,17,0	1/1:12,0:12:9.03:200,9,0	./.	0/0:14,0:14:27.91:0,28,816	0/0:17,0:17:51.18:0,51,1950	0/0:24,0:24:53.16:0,53,2494	0/0:29,0:29:81.27:0,81,2504	0/0:30,0:30:90.30:0,90,2872	0/0:23,0:23:53.13:0,53,1655	0/0:10,0:9:24.03:0,24,601
chr10	30307398	.	GTC	G	62.83	PASS	AB=0.653;AC=4;AF=0.074;AN=54;BaseQRankSum=4.782;DP=505;FS=8.019;HRun=0;HaplotypeScore=101.7656;InbreedingCoeff=0.5715;MQ=62.09;MQ0=4;MQRankSum=-4.672;QD=3.49;ReadPosRankSum=2.907;VQSLOD=1.5394;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,1:22:47.79:0,48,904	0/0:6,0:6:18.06:0,18,347	0/0:17,0:12:33.10:0,33,612	0/0:15,0:9:27.09:0,27,554	0/0:27,0:27:44.84:0,45,914	0/0:29,0:29:75.26:0,75,1379	0/0:15,0:15:36.12:0,36,717	0/0:34,0:33:99:0,99,1927	0/0:13,0:13:30.06:0,30,554	0/0:28,0:27:80.48:0,80,1448	0/0:21,0:21:60.21:0,60,1126	0/0:20,0:20:54.18:0,54,1013	0/0:21,0:21:45.15:0,45,858	0/0:17,0:17:44.93:0,45,796	0/0:15,0:15:33.11:0,33,670	0/0:19,0:19:54.19:0,54,1097	0/0:6,0:6:0:0,0,0	0/1:2,1:3:5.64:18,0,6	0/1:1,4:5:5.87:91,0,6	1/1:0,10:10:8.90:60,9,0	./.	0/0:14,0:14:28.76:0,29,495	0/0:22,0:22:66.23:0,66,1309	0/0:22,1:23:54.19:0,54,1083	0/0:33,0:33:93.15:0,93,1694	0/0:34,0:34:99:0,100,1835	0/0:27,0:27:60.14:0,60,1111	0/0:9,0:9:21.41:0,21,321
chr10	30307401	.	ATG	A	65.54	PASS	AB=0.678;AC=4;AF=0.077;AN=52;BaseQRankSum=4.732;DP=513;FS=5.687;HRun=0;HaplotypeScore=105.1167;InbreedingCoeff=0.6232;MQ=63.93;MQ0=4;MQRankSum=-4.744;QD=3.45;ReadPosRankSum=2.875;VQSLOD=2.0170;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:50.80:0,51,1020	0/0:6,0:6:18.06:0,18,340	0/0:17,0:12:35.91:0,36,650	0/0:19,0:13:36.08:0,36,682	0/0:28,0:28:47.85:0,48,957	0/0:29,0:29:78.27:0,78,1582	0/0:16,0:16:39.13:0,39,791	0/0:33,0:32:96.33:0,96,1923	0/0:15,0:15:30.10:0,30,598	0/0:29,0:28:84.28:0,84,1661	0/0:21,0:21:60.21:0,60,1200	0/0:19,0:19:54.19:0,54,1095	0/0:21,0:21:48.16:0,48,975	0/0:19,0:19:47.94:0,48,929	0/0:15,0:15:36.12:0,36,720	0/0:20,0:20:57.20:0,57,1157	./.	0/1:3,1:4:3.90:20,0,4	0/1:1,4:5:3.74:91,0,4	1/1:0,10:10:8.90:61,9,0	./.	0/0:15,0:15:31.77:0,32,622	0/0:23,0:23:69.24:0,69,1390	0/0:23,0:23:54.19:0,54,1078	0/0:32,0:32:93.18:0,93,1842	0/0:31,0:31:93.32:0,93,1883	0/0:24,0:24:60.14:0,60,1205	0/0:10,0:10:23.87:0,24,400
chr10	30307543	.	A	AGTGT	2315.70	PASS	AB=0.950;AC=33;AF=0.688;AN=48;BaseQRankSum=-3.524;DP=500;FS=7.096;HRun=0;HaplotypeScore=114.1105;InbreedingCoeff=0.2709;MQ=58.85;MQ0=7;MQRankSum=2.103;QD=6.00;ReadPosRankSum=-2.655;VQSLOD=1.0911;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:15,7:23:3.01:70,3,0	0/0:5,0:8:9.02:0,9,120	./.	./.	0/1:19,0:19:4.91:154,0,5	1/1:30,0:30:20.90:238,21,0	1/1:12,5:16:2.30:69,2,0	1/1:27,0:27:11.99:148,12,0	1/1:17,0:16:6.02:109,6,0	0/1:20,0:20:14.78:83,0,15	0/1:11,0:11:19.49:19,0,37	1/1:8,6:17:3.01:70,3,0	0/1:20,1:21:37.16:131,0,37	1/1:18,0:18:6:66,6,0	0/1:20,6:26:37.17:78,0,37	1/1:9,7:18:8.71:153,9,0	./.	0/0:7,0:9:6.01:0,6,56	0/0:11,0:12:6.01:0,6,56	0/0:15,0:20:15.02:0,15,140	./.	0/0:11,0:13:12.03:0,12,166	1/1:16,0:15:2.99:55,3,0	1/1:12,0:12:8.98:152,9,0	1/1:12,13:29:8.70:210,9,0	1/1:10,0:14:8.70:94,9,0	1/1:30,0:30:30.05:500,30,0	1/1:12,8:18:3.01:70,3,0
chr10	30307641	.	CA	C	3422.12	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=13.727;DP=581;FS=3.115;HRun=2;HaplotypeScore=72.3214;InbreedingCoeff=0.9921;MQ=87.92;MQ0=0;MQRankSum=-9.060;QD=34.57;ReadPosRankSum=1.488;VQSLOD=4.0894;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:99:0,99,1464	0/0:4,0:4:12.04:0,12,180	0/0:18,0:18:48.12:0,48,639	0/0:25,0:25:48.61:0,49,692	0/0:30,0:30:87.29:0,87,1299	0/0:26,0:26:78.26:0,78,1159	0/0:16,0:16:48.16:0,48,720	0/0:33,0:33:99:0,99,1452	0/0:18,0:18:54.18:0,54,804	0/0:18,0:18:54.18:0,54,799	0/0:24,0:24:69.23:0,69,1033	0/0:14,0:14:42.14:0,42,630	0/0:20,0:20:60.18:0,60,857	0/0:16,0:16:48.12:0,48,694	0/0:30,0:30:84.28:0,84,1254	0/0:16,0:16:48.16:0,48,720	1/1:0,20:20:54.18:700,54,0	1/1:2,10:12:27.09:350,27,0	1/1:0,18:18:48.16:623,48,0	1/1:0,31:31:87.28:1127,87,0	1/1:1,17:17:48.16:622,48,0	0/0:23,0:23:69.23:0,69,1024	0/0:23,0:23:69.23:0,69,1029	0/0:22,0:22:63.19:0,63,921	0/0:24,0:24:72.20:0,72,1050	0/0:16,0:16:48.14:0,48,682	0/0:25,0:25:72.21:0,72,1045	0/0:8,0:8:24.08:0,24,360
chr10	30307792	.	A	ACCCTG	6807.68	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=3.737;DP=708;FS=4.143;HRun=0;HaplotypeScore=129.1456;InbreedingCoeff=0.9957;MQ=84.07;MQ0=0;MQRankSum=-12.775;QD=76.49;ReadPosRankSum=-1.166;VQSLOD=6.1490;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,105,2192	0/0:6,0:6:18.06:0,18,391	0/0:29,0:29:75.25:0,75,1543	0/0:21,0:21:54.18:0,54,1139	0/0:22,0:22:60.21:0,60,1284	0/0:31,0:31:90.28:0,90,1870	0/0:26,0:26:75.26:0,75,1612	0/0:39,0:39:99:0,111,2411	0/0:29,0:29:81.28:0,81,1758	0/0:27,0:27:78.26:0,78,1655	0/0:24,0:24:69.24:0,69,1499	0/0:23,0:23:69.24:0,69,1497	0/0:32,0:32:96.31:0,96,2035	0/0:25,0:25:69.22:0,69,1458	0/0:41,0:41:99:0,117,2534	0/0:35,0:35:99:0,102,2213	1/1:1,9:11:23.93:758,24,0	1/1:3,4:7:18.06:570,18,0	1/1:4,16:21:57.18:1617,57,0	1/1:4,28:33:84.29:2653,84,0	1/1:4,12:17:39.13:1209,39,0	0/0:18,0:18:48.15:0,48,1003	0/0:19,0:19:54.18:0,54,1172	0/0:26,0:26:78.21:0,78,1606	0/0:22,0:22:63.17:0,63,1283	0/0:23,0:23:69.24:0,69,1499	0/0:40,0:40:99:0,117,2456	0/0:24,0:23:66.23:0,66,1432
chr10	30308570	.	CCTTGCA	C	906.44	PASS	AB=0.571;AC=7;AF=0.125;AN=56;BaseQRankSum=8.478;DP=692;FS=16.993;HRun=0;HaplotypeScore=152.3494;InbreedingCoeff=0.8344;MQ=91.45;MQ0=0;MQRankSum=-7.536;QD=30.21;ReadPosRankSum=-0.380;VQSLOD=2.4724;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,129,4566	0/0:12,0:12:36.12:0,36,1293	0/0:28,0:28:81.27:0,81,2449	0/0:28,0:28:81.27:0,81,2623	0/0:29,0:29:87.28:0,87,2979	0/0:32,0:32:96.33:0,96,3425	0/0:19,0:19:57.20:0,57,2033	0/0:26,0:26:75.26:0,75,2621	0/0:32,0:32:96.33:0,96,3449	0/0:36,0:36:99:0,108,3953	0/0:22,0:22:63.22:0,63,2303	0/0:40,0:40:99:0,120,4273	0/0:43,0:43:99:0,129,4743	0/0:26,0:26:78.26:0,78,2729	0/0:43,0:43:99:0,129,4674	0/0:36,0:36:99:0,108,3944	0/0:1,1:2:2.88:0,3,15	1/1:2,2:4:11.71:162,12,0	1/1:4,7:11:11.01:383,11,0	1/1:4,7:11:23.51:357,24,0	0/1:1,3:4:2:145,0,2	0/0:25,0:25:75.26:0,75,2794	0/0:18,0:18:54.19:0,54,1988	0/0:32,0:32:93.28:0,93,3366	0/0:30,0:30:90.30:0,90,3179	0/0:24,0:24:69.23:0,69,2422	0/0:28,0:28:84.29:0,84,3135	0/0:8,0:8:24.08:0,24,810
chr10	30308578	.	CCTT	C	378.03	PASS	AB=0.637;AC=4;AF=0.071;AN=56;BaseQRankSum=7.225;DP=682;FS=17.896;HRun=0;HaplotypeScore=108.0450;InbreedingCoeff=-0.0817;MQ=86.65;MQ0=0;MQRankSum=-7.084;QD=11.46;ReadPosRankSum=1.645;VQSLOD=2.2462;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,120,2845	0/0:11,0:11:33.11:0,33,812	0/0:22,0:22:66.23:0,66,1563	0/0:24,0:24:69.24:0,69,1627	0/0:30,0:30:90.31:0,90,2211	0/0:31,0:31:93.32:0,93,2240	0/0:14,0:14:42.14:0,42,1035	0/0:25,0:25:75.26:0,75,1828	0/0:32,0:32:96.33:0,96,2337	0/0:36,0:36:99:0,108,2464	0/0:24,0:24:69.22:0,69,1604	0/0:35,0:35:99:0,105,2541	0/0:40,0:40:99:0,117,2733	0/0:24,0:24:72.25:0,72,1742	0/0:45,0:45:99:0,135,3280	0/0:41,0:41:99:0,123,2941	0/0:3,1:4:3.01:0,3,50	0/1:3,2:5:23.28:55,0,23	0/1:5,7:12:99:197,0,163	0/1:5,7:12:54.97:154,0,55	0/1:1,3:4:36.99:81,0,37	0/0:30,0:30:87.26:0,87,2016	0/0:19,0:19:57.20:0,57,1380	0/0:32,0:32:93.32:0,93,2287	0/0:29,0:29:87.30:0,87,2119	0/0:25,0:25:72.25:0,72,1715	0/0:29,0:29:87.30:0,87,2119	0/0:7,0:7:21.05:0,21,467
chr10	30308680	.	T	TGAGTAGAC	4869.75	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=9.186;DP=735;FS=69.972;HRun=0;HaplotypeScore=185.6495;InbreedingCoeff=0.9653;MQ=73.29;MQ0=0;MQRankSum=-9.301;QD=97.39;ReadPosRankSum=-1.170;VQSLOD=2.2983;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,120,3225	0/0:14,0:14:42.10:0,42,1096	0/0:21,0:21:63.19:0,63,1698	0/0:21,0:21:60.16:0,60,1542	0/0:35,0:35:99:0,102,3016	0/0:28,0:28:78.27:0,78,2202	0/0:23,0:23:69.22:0,69,1919	0/0:36,0:36:99:0,99,2648	0/0:26,0:26:75.26:0,75,2210	0/0:46,0:46:99:0,138,3959	0/0:26,0:26:75.25:0,75,2083	0/0:30,0:30:84.27:0,84,2300	0/0:45,0:45:99:0,132,3828	0/0:32,0:32:96.33:0,96,2714	0/0:56,0:56:99:0,166,4767	0/0:33,0:33:93.29:0,93,2574	1/1:2,2:5:12.04:548,12,0	1/1:1,2:4:5.96:270,6,0	1/1:5,5:12:33.03:1199,33,0	1/1:3,14:17:45.15:2043,45,0	1/1:7,4:12:18.06:810,18,0	0/0:36,0:36:99:0,102,3047	0/0:25,0:25:75.26:0,75,2189	0/0:22,0:22:66.23:0,66,1851	0/0:22,0:22:66.23:0,66,1983	0/0:33,0:33:99:0,99,2927	0/0:24,0:24:72.25:0,72,2097	0/0:9,0:9:27.09:0,27,774
chr10	30309300	.	TC	T	2798.29	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=9.395;DP=652;FS=5.745;HRun=7;HaplotypeScore=62.6738;InbreedingCoeff=0.9953;MQ=82.91;MQ0=0;MQRankSum=-2.010;QD=24.12;ReadPosRankSum=3.557;VQSLOD=4.1130;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:93.30:0,93,1169	0/0:7,0:7:21.07:0,21,264	0/0:28,0:28:72.15:0,72,846	0/0:23,0:22:58.03:0,58,604	0/0:20,0:20:54.14:0,54,650	0/0:30,0:30:84.25:0,84,1041	0/0:33,0:33:90.28:0,90,1119	0/0:27,0:27:75.18:0,75,902	0/0:18,0:18:48.14:0,48,592	0/0:14,0:14:36.11:0,36,449	0/0:15,0:15:36.10:0,36,439	0/0:30,0:30:84.25:0,84,1038	0/0:30,0:30:84.17:0,84,1020	0/0:18,0:18:51.15:0,51,626	0/0:17,0:16:48.15:0,48,604	0/0:25,0:25:75.21:0,75,906	1/1:4,28:32:78.18:795,78,0	1/1:4,21:25:60.13:612,60,0	1/1:3,16:19:48.05:466,48,0	1/1:0,19:19:57.13:581,57,0	1/1:2,19:21:51.11:520,51,0	0/0:18,0:18:54.15:0,54,664	0/0:23,0:23:57.15:0,57,678	0/0:27,0:27:72.22:0,72,893	0/0:36,0:36:99:0,102,1272	0/0:27,0:27:69.18:0,69,848	0/0:25,0:23:69.19:0,69,840	0/0:5,0:5:15.05:0,15,189
chr10	30309488	.	T	TAG	5329.61	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=2.058;DP=785;FS=1.240;HRun=0;HaplotypeScore=94.6432;InbreedingCoeff=0.9983;MQ=80.37;MQ0=1;MQRankSum=-0.773;QD=34.16;ReadPosRankSum=1.319;VQSLOD=7.2253;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,135,1710	0/0:9,0:9:27.07:0,27,333	0/0:26,0:26:24.31:0,24,518	0/0:21,0:21:42.13:0,42,538	0/0:28,0:28:78.24:0,78,990	0/0:35,0:35:78.25:0,78,1004	0/0:30,0:30:63.20:0,63,811	0/0:40,0:40:84.25:0,84,1044	0/0:24,0:24:60.19:0,60,772	0/0:26,0:26:72.23:0,72,926	0/0:13,0:13:36.12:0,36,463	0/0:37,0:37:99:0,105,1338	0/0:35,0:35:99:0,99,1258	0/0:34,0:34:84.27:0,84,1081	0/0:32,0:32:93.30:0,93,1196	0/0:31,0:31:87.26:0,87,1092	1/1:5,26:31:69.24:1163,69,0	1/1:5,24:29:54.18:903,54,0	1/1:5,17:22:54.17:884,54,0	1/1:7,28:37:69.24:1164,69,0	1/1:7,29:36:72.25:1215,72,0	0/0:19,0:19:48.14:0,48,602	0/0:23,0:23:54.18:0,54,695	0/0:23,0:22:66.19:0,66,834	0/0:30,0:30:72.23:0,72,926	0/0:26,0:26:69.21:0,69,860	0/0:33,0:33:84.27:0,84,1081	0/0:8,0:8:21.07:0,21,270
chr10	30310738	.	AT	A	428.38	PASS	AC=8;AF=0.148;AN=54;BaseQRankSum=3.788;DP=525;FS=28.985;HRun=2;HaplotypeScore=66.8509;InbreedingCoeff=0.9162;MQ=71.38;MQ0=19;MQRankSum=-2.464;QD=9.31;ReadPosRankSum=-2.751;VQSLOD=-0.7151;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:72.18:0,72,927	0/0:4,0:4:9.03:0,9,120	0/0:26,0:17:51.17:0,51,682	0/0:33,0:25:72.17:0,72,901	0/0:20,0:20:54.16:0,54,707	0/0:22,0:22:52.74:0,53,637	0/0:25,0:25:57.20:0,57,712	0/0:22,0:22:66.03:0,66,824	0/0:20,0:19:51.19:0,51,632	0/0:16,0:16:45.15:0,45,594	0/0:19,0:19:44.29:0,44,522	0/0:27,0:27:73.60:0,74,862	0/0:22,0:22:56.60:0,57,702	0/0:16,0:16:39.13:0,39,521	0/0:24,0:24:62.79:0,63,812	0/0:26,0:26:72.26:0,72,818	1/1:6,3:8:14.23:135,14,0	1/1:10,2:10:3.98:15,4,0	1/1:2,12:8:24.08:306,24,0	1/1:4,7:5:9.03:115,9,0	./.	0/0:9,0:9:26.17:0,26,259	0/0:11,0:10:27.09:0,27,361	0/0:19,0:19:45.09:0,45,565	0/0:21,0:21:60.14:0,60,766	0/0:23,0:23:65.73:0,66,881	0/0:23,0:23:61.82:0,62,707	0/0:9,0:8:24.08:0,24,321
chr10	30310739	.	TTGTGTGTG	T	1364.55	PASS	AB=0.889;AC=25;AF=0.658;AN=38;BaseQRankSum=0.308;DP=559;FS=2.990;HRun=0;HaplotypeScore=132.7299;InbreedingCoeff=0.3806;MQ=68.77;MQ0=21;MQRankSum=-2.745;QD=4.87;ReadPosRankSum=4.099;VQSLOD=2.4480;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	./.	1/1:20,3:23:2.80:74,3,0	0/1:21,3:24:14.31:68,0,14	0/0:26,0:26:2.03:0,2,5	1/1:20,0:20:2.49:15,2,0	1/1:16,0:16:3.01:48,3,0	1/1:14,3:17:3.01:74,3,0	1/1:23,4:27:12.03:293,12,0	1/1:17,5:22:6.02:143,6,0	./.	1/1:22,2:24:3:74,3,0	1/1:20,0:26:18.06:335,18,0	0/0:8,0:10:9.03:0,9,236	0/0:8,0:15:18.42:0,18,402	0/0:19,0:14:2.68:0,3,11	./.	0/0:8,0:9:3.01:0,3,90	1/1:8,2:9:6.02:147,6,0	./.	1/1:18,3:21:2.22:7,2,0	./.	1/1:25,0:25:0.42:32,0,0	1/1:21,1:24:7.33:182,7,0	0/0:10,0:9:2.88:0,3,15
chr10	30310785	.	GT	G	222.67	PASS	AB=0.894;AC=5;AF=0.089;AN=56;BaseQRankSum=4.217;DP=457;FS=5.770;HRun=1;HaplotypeScore=64.3930;InbreedingCoeff=0.3249;MQ=52.98;MQ0=40;MQRankSum=-4.471;QD=3.77;ReadPosRankSum=1.078;VQSLOD=0.3053;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:48.13:0,48,589	0/0:6,0:6:15.05:0,15,189	0/0:19,0:9:26.99:0,27,303	0/0:18,0:11:33.10:0,33,411	0/0:18,0:18:42.08:0,42,484	0/0:26,0:26:45.57:0,46,539	0/0:20,0:18:36.52:0,37,440	0/0:17,0:17:51.16:0,51,641	0/0:14,0:12:24.95:0,25,290	0/0:14,0:13:37.75:0,38,420	0/0:12,0:11:12.51:0,13,152	0/0:28,0:28:59.81:0,60,706	0/0:16,0:16:29.33:0,29,330	0/0:18,0:18:45.11:0,45,536	0/0:25,0:25:60.59:0,61,727	0/0:20,0:19:32.45:0,32,431	0/1:17,2:16:80.70:84,0,81	0/1:10,4:10:99:121,0,147	0/1:5,0:3:29.87:30,0,32	0/0:10,1:5:0:0,0,0	1/1:17,4:9:9.02:105,9,0	0/0:18,0:17:40.06:0,40,485	0/0:10,0:9:21.07:0,21,263	0/0:18,0:18:36.57:0,37,437	0/0:9,0:9:21.05:0,21,251	0/0:17,0:16:40.68:0,41,490	0/0:22,0:22:52.75:0,53,628	0/0:3,0:3:9:0,9,86
chr10	30311101	.	ATATATATATAT	A	1685.33	PASS	AB=1.000;AC=34;AF=0.850;AN=40;BaseQRankSum=-4.455;DP=241;FS=1.591;HRun=0;HaplotypeScore=71.6981;InbreedingCoeff=0.1681;MQ=86.63;MQ0=4;MQRankSum=0.268;QD=9.42;ReadPosRankSum=1.691;VQSLOD=1.1941;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:5,4:9:5.98:118,6,0	1/1:1,0:1:2.98:22,3,0	0/0:31,0:15:4.17:0,4,36	0/1:52,0:19:1.94:23,0,2	1/1:7,4:11:8.99:208,9,0	1/1:3,2:5:3.01:98,3,0	1/1:7,0:7:2.97:20,3,0	1/1:13,14:27:41.90:393,42,0	1/1:3,0:3:3:27,3,0	1/1:0,3:3:3.01:49,3,0	1/1:3,2:5:5.98:118,6,0	./.	1/1:8,0:8:5.93:95,6,0	./.	./.	1/1:5,0:5:3:25,3,0	1/1:11,0:10:8.46:98,8,0	0/1:11,0:11:32.94:33,0,56	0/0:3,0:3:5.97:0,6,92	./.	1/1:4,0:3:2.50:9,2,0	./.	./.	./.	1/1:5,3:7:9.01:219,9,0	1/1:1,0:1:3:27,3,0	1/1:5,3:8:8.92:212,9,0	./.
chr10	30311111	.	AT	A	449.96	PASS	AB=1.000;AC=11;AF=0.220;AN=50;BaseQRankSum=3.868;DP=198;FS=5.917;HRun=2;HaplotypeScore=39.6043;InbreedingCoeff=0.2877;MQ=85.44;MQ0=4;MQRankSum=-5.012;QD=7.63;ReadPosRankSum=2.553;VQSLOD=1.1083;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:6:5.42:0,5,118	0/0:1,0:1:3.01:0,3,42	0/0:32,0:14:19.52:0,20,177	0/0:57,0:17:18.13:0,18,116	0/1:8,0:8:22.94:23,0,172	0/0:4,0:4:2.39:0,2,64	0/0:3,0:3:9.03:0,9,123	0/1:20,0:20:85.70:86,0,506	0/0:2,0:2:6.01:0,6,71	0/0:3,0:3:3.01:0,3,36	0/0:4,0:4:2.38:0,2,78	0/0:1,0:1:3.01:0,3,40	0/0:3,0:3:9.02:0,9,109	./.	0/0:2,1:2:3.01:0,3,40	0/0:4,0:4:12.02:0,12,145	1/1:5,7:11:14.48:151,14,0	1/1:4,5:9:18.06:224,18,0	1/1:1,1:2:6.02:75,6,0	./.	1/1:0,2:1:3:26,3,0	0/0:1,0:1:1.25:0,1,3	./.	0/0:1,0:1:3.01:0,3,40	0/1:6,0:5:1.50:1,0,42	0/0:1,0:1:3.01:0,3,40	0/0:7,0:7:3.62:0,4,116	0/0:3,0:3:9.03:0,9,120
chr10	30311112	.	T	TA	475.16	PASS	AB=0.952;AC=11;AF=0.212;AN=52;BaseQRankSum=2.755;DP=202;FS=9.037;HRun=1;HaplotypeScore=40.5759;InbreedingCoeff=0.3460;MQ=84.91;MQ0=4;MQRankSum=-1.860;QD=7.79;ReadPosRankSum=0.369;VQSLOD=0.0597;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:6:11.39:0,11,113	0/0:1,0:1:2.99:0,3,23	0/0:33,0:15:18.65:0,19,182	0/0:56,0:17:12.49:0,12,93	0/1:8,0:8:16.96:17,0,157	0/0:4,0:4:8.39:0,8,84	0/0:3,0:3:9.02:0,9,105	0/1:21,0:21:83.07:83,0,444	0/0:2,0:2:6.01:0,6,65	0/0:3,0:3:2.90:0,3,16	0/0:4,0:4:8.38:0,8,73	0/0:1,0:1:3.01:0,3,40	0/0:4,0:4:9.01:0,9,96	./.	0/0:2,0:1:3.01:0,3,40	0/0:4,0:4:11.98:0,12,124	1/1:8,4:11:11.88:122,12,0	1/1:6,4:10:21.06:262,21,0	1/1:1,1:2:6.02:82,6,0	./.	1/1:2,0:1:3.01:48,3,0	0/0:1,0:1:1.25:0,1,3	0/0:1,0:1:2.04:0,2,6	0/0:1,0:1:3.01:0,3,40	0/1:5,0:5:0.73:1,0,46	0/0:1,0:1:2.94:0,3,18	0/0:7,0:7:15.99:0,16,143	0/0:3,0:3:9.03:0,9,120
chr10	30311122	.	AT	A	466.85	PASS	AB=1.000;AC=22;AF=0.500;AN=44;BaseQRankSum=3.443;DP=174;FS=9.778;HRun=2;HaplotypeScore=44.9207;InbreedingCoeff=0.1705;MQ=81.08;MQ0=3;MQRankSum=-5.250;QD=4.36;ReadPosRankSum=3.710;VQSLOD=0.0146;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:6,0:6:13.83:14,0,69	1/1:1,0:1:2.98:22,3,0	0/0:24,0:10:11.34:0,11,103	0/1:57,0:20:8.83:9,0,108	0/1:5,0:5:15.30:15,0,35	1/1:2,0:2:1.55:4,2,0	0/1:2,0:2:13.92:14,0,34	0/0:24,0:24:68.27:0,68,659	0/0:1,0:1:2.80:0,3,13	0/0:4,0:4:5.91:0,6,56	0/1:3,0:3:16.62:17,0,32	./.	0/0:3,0:3:9.02:0,9,105	0/0:2,0:2:3.01:0,3,45	0/0:3,0:2:6.01:0,6,64	1/1:1,0:1:3:25,3,0	1/1:4,8:11:11.38:113,11,0	1/1:3,6:9:21.07:260,21,0	1/1:0,2:2:6.02:75,6,0	./.	1/1:1,0:1:2.60:10,3,0	./.	./.	./.	0/0:5,0:5:0.61:0,1,43	1/1:1,0:1:3:27,3,0	0/1:5,0:5:3.26:3,0,34	./.
chr10	30311123	.	T	TA	427.34	PASS	AB=1.000;AC=19;AF=0.432;AN=44;BaseQRankSum=1.541;DP=171;FS=6.533;HRun=1;HaplotypeScore=45.6163;InbreedingCoeff=0.2270;MQ=81.74;MQ0=4;MQRankSum=-2.105;QD=4.36;ReadPosRankSum=0.776;VQSLOD=0.2983;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:7,0:7:8.41:8,0,78	1/1:1,0:1:2.98:22,3,0	0/0:23,0:10:9.95:0,10,105	0/1:54,0:19:9.37:9,0,106	0/1:5,0:5:8.48:8,0,56	0/0:2,0:2:2.50:0,2,9	0/1:2,0:2:13.92:14,0,34	0/0:23,0:23:61.73:0,62,535	0/0:1,0:1:2.80:0,3,13	0/0:4,0:4:0.07:0,0,36	0/1:3,0:3:11.42:11,0,41	./.	0/0:3,0:3:8.74:0,9,76	0/0:2,0:2:3.01:0,3,40	0/0:3,0:2:6.01:0,6,64	1/1:1,0:1:3:25,3,0	1/1:10,3:11:8.39:83,8,0	1/1:6,2:8:21.06:270,21,0	1/1:2,0:2:6.02:82,6,0	./.	1/1:1,0:1:2.60:10,3,0	./.	./.	./.	0/0:5,0:5:10.03:0,10,51	1/1:1,0:1:3:27,3,0	0/0:5,0:5:7.59:0,8,58	./.
chr10	30311134	.	TA	T	329.46	PASS	AB=1.000;AC=9;AF=0.196;AN=46;BaseQRankSum=3.864;DP=178;FS=6.348;HRun=2;HaplotypeScore=41.0449;InbreedingCoeff=0.4720;MQ=71.70;MQ0=3;MQRankSum=-3.088;QD=11.36;ReadPosRankSum=1.329;VQSLOD=1.7593;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:14.92:0,15,189	0/0:2,0:2:6.02:0,6,80	0/0:15,0:5:2.31:0,2,8	0/0:43,0:15:11.07:0,11,99	0/0:8,0:8:19.83:0,20,235	0/0:2,0:2:2.90:0,3,16	0/0:3,0:3:6.02:0,6,85	0/0:29,0:29:33.60:0,34,755	./.	0/1:6,0:6:15.38:15,0,76	0/0:6,0:6:14.77:0,15,166	0/0:1,0:1:3.01:0,3,40	0/0:5,0:5:7.17:0,7,121	0/0:5,0:5:12.04:0,12,164	0/0:3,0:2:6.02:0,6,90	0/0:2,0:2:6.01:0,6,64	1/1:6,6:10:7.48:73,7,0	1/1:2,6:8:21.07:260,21,0	1/1:0,2:2:6.02:75,6,0	1/1:0,1:1:3.01:38,3,0	./.	0/0:2,0:2:3.01:0,3,40	./.	./.	0/0:6,0:6:10.74:0,11,109	./.	0/0:6,0:6:11.80:0,12,115	0/0:2,0:2:6.02:0,6,80
chr10	30311135	.	A	AT	316.25	PASS	AB=1.000;AC=9;AF=0.196;AN=46;BaseQRankSum=3.745;DP=171;FS=4.470;HRun=1;HaplotypeScore=40.0401;InbreedingCoeff=0.4619;MQ=73.05;MQ0=3;MQRankSum=-2.902;QD=10.91;ReadPosRankSum=1.015;VQSLOD=1.6979;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:15.04:0,15,193	0/0:2,0:2:6.02:0,6,80	0/0:15,0:5:2.27:0,2,8	0/0:39,0:15:10.30:0,10,81	0/0:8,0:8:21.01:0,21,255	0/0:2,0:2:3.01:0,3,30	0/0:3,0:3:6.02:0,6,82	0/0:29,0:29:33.60:0,34,720	./.	0/1:6,0:6:15.38:15,0,73	0/0:6,0:6:15.03:0,15,173	0/0:1,0:1:3.01:0,3,40	0/0:4,0:4:7.17:0,7,119	0/0:4,0:4:12.04:0,12,162	0/0:3,0:2:6.02:0,6,84	0/0:2,0:2:6.01:0,6,64	1/1:8,4:10:5.51:49,6,0	1/1:7,1:8:21.06:262,21,0	1/1:2,0:2:6.02:82,6,0	1/1:1,0:1:3.01:38,3,0	./.	0/0:3,0:3:3.01:0,3,40	./.	./.	0/0:5,0:5:12.02:0,12,135	./.	0/0:5,0:5:12.03:0,12,140	0/0:2,0:2:6.02:0,6,80
chr10	30312845	.	CT	C	4241.93	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=5.882;DP=742;FS=4.601;HRun=2;HaplotypeScore=78.7247;InbreedingCoeff=0.9990;MQ=82.62;MQ0=0;MQRankSum=0.468;QD=35.95;ReadPosRankSum=2.353;VQSLOD=5.5616;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:63.21:0,63,942	0/0:15,0:15:45.15:0,45,669	0/0:28,0:29:83.43:0,83,1161	0/0:29,0:29:81.24:0,81,1160	0/0:33,0:33:93.30:0,93,1374	0/0:38,0:38:99:0,111,1640	0/0:22,0:22:60.14:0,60,852	0/0:26,0:25:75.24:0,75,1085	0/0:28,0:28:84.28:0,84,1258	0/0:26,0:26:72.24:0,72,1079	0/0:23,0:23:63.17:0,63,918	0/0:41,0:41:99:0,120,1767	0/0:36,0:36:99:0,102,1462	0/0:22,0:22:66.22:0,66,988	0/0:34,0:34:96.29:0,96,1412	0/0:31,0:31:93.28:0,93,1369	1/1:0,31:31:87.28:1129,87,0	1/1:1,14:15:42.14:543,42,0	1/1:0,18:18:54.18:701,54,0	1/1:1,27:28:72.23:934,72,0	1/1:0,26:26:72.23:935,72,0	0/0:20,0:20:60.16:0,60,874	0/0:19,0:19:57.15:0,57,827	0/0:40,0:40:99:0,117,1697	0/0:24,0:24:72.24:0,72,1079	0/0:24,0:24:72.24:0,72,1078	0/0:35,0:35:99:0,102,1526	0/0:7,0:7:21.03:0,21,289
chr10	30313028	.	AG	A	14154.04	PASS	AB=0.867;AC=53;AF=0.946;AN=56;BaseQRankSum=3.585;DP=367;FS=4.132;HRun=1;HaplotypeScore=394.9050;InbreedingCoeff=0.4096;MQ=52.28;MQ0=1;MQRankSum=-2.262;QD=39.10;ReadPosRankSum=2.941;VQSLOD=2.7475;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,9:9:27.04:339,27,0	1/1:0,11:11:33.11:456,33,0	0/1:10,2:9:67.47:67,0,123	0/0:5,0:4:2.95:0,3,61	1/1:0,21:21:63.15:809,63,0	1/1:0,18:18:54.18:748,54,0	1/1:0,5:5:15.05:208,15,0	1/1:0,7:7:18.06:249,18,0	1/1:0,15:15:45.15:623,45,0	1/1:0,8:8:24.08:332,24,0	1/1:0,16:16:48.16:662,48,0	1/1:0,22:22:66.22:912,66,0	1/1:0,18:18:54.18:747,54,0	1/1:0,14:14:42.14:581,42,0	1/1:0,21:21:63.21:871,63,0	1/1:0,22:22:66.22:913,66,0	1/1:0,8:8:18.06:249,18,0	1/1:0,3:3:8.99:101,9,0	1/1:0,7:7:18.06:250,18,0	1/1:0,17:17:48.16:663,48,0	1/1:0,4:4:12.04:166,12,0	1/1:0,21:21:63.21:869,63,0	1/1:0,20:20:60.15:806,60,0	1/1:0,5:5:12.04:166,12,0	1/1:0,19:19:57.19:788,57,0	1/1:0,17:17:51.17:706,51,0	1/1:0,16:16:48.16:664,48,0	1/1:0,5:5:15.05:208,15,0
chr10	30313047	.	A	AG	7497.13	PASS	AC=52;AF=0.963;AN=54;BaseQRankSum=-0.870;DP=516;FS=12.309;HRun=1;HaplotypeScore=603.5392;InbreedingCoeff=0.4086;MQ=43.88;MQ0=1;MQRankSum=0.111;QD=14.90;ReadPosRankSum=-1.499;VQSLOD=1.0508;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,1:20:44.26:201,44,0	1/1:10,2:12:31.31:184,31,0	0/0:9,0:9:1.89:0,2,35	./.	1/1:26,6:32:72.71:535,73,0	1/1:19,4:23:56.29:357,56,0	1/1:11,1:12:30.29:181,30,0	1/1:17,2:19:21.86:119,22,0	1/1:17,4:21:52.74:349,53,0	1/1:6,5:11:30.98:269,31,0	1/1:21,3:24:55:458,55,0	1/1:32,5:37:89.10:596,89,0	1/1:24,3:27:53.77:289,54,0	1/1:17,1:18:39.19:178,39,0	1/1:26,4:30:74.26:464,74,0	1/1:24,4:28:72.32:622,72,0	1/1:10,0:10:2.76:39,3,0	1/1:5,0:5:6.69:17,7,0	1/1:18,2:20:32.13:154,32,0	1/1:23,0:23:4.56:162,5,0	1/1:2,1:3:3.01:36,3,0	1/1:19,6:25:65.31:606,65,0	1/1:17,2:19:51.70:376,52,0	1/1:9,1:10:15.35:81,15,0	1/1:19,4:23:58.22:495,58,0	1/1:16,3:19:50.37:280,50,0	1/1:21,5:26:64.12:402,64,0	1/1:6,0:6:13.59:48,14,0
chr10	30313090	.	C	CA	1917.49	PASS	AB=0.983;AC=50;AF=0.893;AN=56;BaseQRankSum=2.582;DP=509;FS=6.199;HRun=0;HaplotypeScore=446.1233;InbreedingCoeff=0.3791;MQ=39.78;MQ0=2;MQRankSum=-2.692;QD=3.83;ReadPosRankSum=2.919;VQSLOD=1.9961;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:21,1:22:24.31:156,24,0	1/1:11,0:11:10.81:23,11,0	0/0:3,0:1:2.74:0,3,12	0/0:6,0:5:6.49:0,6,77	0/1:27,1:28:12.27:87,0,12	0/1:16,0:16:0.70:102,0,1	1/1:12,0:12:8.81:16,9,0	1/1:18,2:20:37.42:187,37,0	1/1:23,0:23:15.41:29,15,0	1/1:26,0:26:37.40:133,37,0	1/1:21,0:21:9.03:102,9,0	1/1:30,1:31:31.81:177,32,0	1/1:33,2:35:16.02:191,16,0	1/1:21,1:22:7.79:46,8,0	1/1:29,0:29:18.67:67,19,0	1/1:23,0:23:20.92:42,21,0	1/1:11,0:11:11.07:52,11,0	1/1:3,0:3:6.45:21,6,0	1/1:18,2:20:34.31:132,34,0	1/1:21,1:22:15.75:58,16,0	1/1:2,0:2:0.47:1,0,0	1/1:20,0:20:0.36:3,0,0	1/1:16,1:17:0.61:31,1,0	1/1:6,1:7:2.45:36,2,0	1/1:19,1:20:19.82:116,20,0	1/1:24,0:24:42.28:141,42,0	1/1:28,0:28:20.54:54,21,0	1/1:7,0:7:11.30:29,11,0
chr10	30313416	.	G	GCAGA	8463.04	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-13.705;DP=876;FS=1.199;HRun=0;HaplotypeScore=149.2173;InbreedingCoeff=0.9980;MQ=73.04;MQ0=0;MQRankSum=-2.482;QD=52.89;ReadPosRankSum=3.110;VQSLOD=6.1071;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,117,2118	0/0:9,0:9:18.06:0,18,327	0/0:32,0:30:78.25:0,78,1333	0/0:47,0:43:99:0,110,1823	0/0:32,0:32:78.22:0,78,1373	0/0:28,0:28:75.20:0,75,1305	0/0:33,0:33:93.32:0,93,1686	0/0:43,0:43:99:0,108,1883	0/0:38,0:38:99:0,102,1745	0/0:31,0:31:87.30:0,87,1556	0/0:20,0:20:36.12:0,36,654	0/0:39,0:39:99:0,108,1928	0/0:39,0:38:99:0,102,1825	0/0:29,0:29:84.26:0,84,1475	0/0:38,0:38:99:0,114,2062	0/0:41,0:41:99:0,105,1869	1/1:5,25:30:63.22:1650,63,0	1/1:0,27:27:75.26:1965,75,0	1/1:9,11:23:57.14:1164,57,0	1/1:3,25:30:54.19:1412,54,0	1/1:11,36:49:86.62:2272,87,0	0/0:25,0:25:51.15:0,51,853	0/0:25,0:25:60.21:0,60,1079	0/0:32,0:32:93.32:0,93,1679	0/0:21,0:21:42.14:0,42,763	0/0:24,0:24:63.22:0,63,1137	0/0:36,0:36:99:0,105,1872	0/0:11,0:11:33.11:0,33,600
chr10	30322288	.	T	TC	24247.93	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-3.035;DP=689;FS=6.642;HRun=3;HaplotypeScore=114.5084;InbreedingCoeff=0.9975;MQ=75.84;MQ0=0;MQRankSum=-9.948;QD=37.48;ReadPosRankSum=4.809;VQSLOD=3.7650;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,20:25:63.19:854,63,0	1/1:0,8:8:24.08:336,24,0	0/0:24,0:24:60.61:0,61,691	0/0:18,0:17:40.62:0,41,420	1/1:3,43:46:99:1784,129,0	1/1:4,27:31:90.27:1199,90,0	1/1:6,18:24:57.17:780,57,0	1/1:10,25:35:87.28:1200,87,0	1/1:1,20:21:63.21:880,63,0	1/1:3,16:19:54.18:752,54,0	1/1:3,26:29:84.28:1171,84,0	1/1:7,19:26:63.16:837,63,0	1/1:1,21:22:66.21:908,66,0	1/1:1,19:20:57.19:797,57,0	1/1:5,30:35:99:1351,99,0	1/1:3,21:24:66.22:922,66,0	1/1:3,23:26:72.19:969,72,0	1/1:0,9:9:27.09:378,27,0	1/1:2,11:13:33.11:462,33,0	1/1:3,41:44:99:1719,123,0	1/1:6,12:18:33.11:446,33,0	1/1:3,20:23:62.99:864,63,0	1/1:3,21:24:72.20:961,72,0	1/1:5,10:15:27.08:361,27,0	1/1:2,31:33:99:1339,99,0	1/1:2,33:35:99:1412,102,0	1/1:5,24:29:78.26:1088,78,0	1/1:3,10:13:36.11:479,36,0
chr10	30322323	.	AT	A	17480.27	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-2.757;DP=675;FS=11.992;HRun=5;HaplotypeScore=129.6118;InbreedingCoeff=0.9928;MQ=72.98;MQ0=0;MQRankSum=-8.290;QD=27.44;ReadPosRankSum=4.056;VQSLOD=3.2293;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,18:19:36.10:406,36,0	1/1:0,11:11:27.07:305,27,0	0/0:23,0:23:54.10:0,54,651	0/0:14,0:14:17.53:0,18,182	1/1:2,49:51:99:1481,135,0	1/1:2,23:25:60.17:677,60,0	1/1:2,17:19:45.13:508,45,0	1/1:7,34:41:99:1216,111,0	1/1:1,20:21:48.14:542,48,0	1/1:1,21:22:63.08:655,63,0	1/1:2,29:31:78.22:880,78,0	1/1:1,24:25:66.19:745,66,0	1/1:0,20:20:48.14:539,48,0	1/1:3,16:19:33.09:372,33,0	1/1:0,29:29:75.21:846,75,0	1/1:0,25:25:50.55:576,51,0	1/1:1,23:24:56.37:616,56,0	1/1:1,10:11:24.03:257,24,0	1/1:1,12:13:36.09:399,36,0	1/1:2,39:41:99:1236,111,0	1/1:1,16:17:36:379,36,0	1/1:2,19:21:57.15:634,57,0	1/1:0,27:27:63.18:711,63,0	1/1:0,11:11:30.09:339,30,0	1/1:1,33:34:84.22:939,84,0	1/1:2,33:35:99:1106,99,0	1/1:0,24:24:69.20:778,69,0	1/1:2,19:21:30.09:338,30,0
chr10	30323236	.	A	AACACACAC	6984.24	PASS	AB=1.000;AC=43;AF=0.827;AN=52;BaseQRankSum=0.156;DP=495;FS=8.432;HRun=0;HaplotypeScore=156.4518;InbreedingCoeff=0.5628;MQ=60.79;MQ0=5;MQRankSum=-4.995;QD=17.95;ReadPosRankSum=-4.311;VQSLOD=2.2111;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:27:12.04:333,12,0	1/1:7,1:8:3.01:122,3,0	./.	./.	1/1:18,0:19:6.02:224,6,0	1/1:18,1:21:5.84:211,6,0	1/1:13,1:15:6.02:229,6,0	1/1:25,0:25:24.08:538,24,0	1/1:10,0:9:12.04:324,12,0	1/1:14,1:17:24.97:803,25,0	1/1:9,3:16:3.01:122,3,0	1/1:13,2:17:9.03:318,9,0	1/1:18,0:18:15.01:394,15,0	1/1:15,0:20:9.03:313,9,0	1/1:12,3:18:19.62:570,20,0	1/1:16,0:16:15.05:391,15,0	0/1:15,0:18:39.41:39,0,465	0/0:18,0:24:30.01:0,30,625	0/0:13,0:13:8.70:0,9,146	0/0:18,0:19:24.08:0,24,504	0/0:9,0:9:9.03:0,9,225	1/1:16,0:16:5.54:126,6,0	1/1:20,0:20:12.91:294,13,0	1/1:14,0:19:6.02:169,6,0	1/1:13,2:16:9.03:331,9,0	1/1:20,0:20:27.17:544,27,0	1/1:22,3:26:12.04:478,12,0	1/1:5,0:4:3.01:108,3,0
chr10	30323716	.	G	GAC	6157.76	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-14.973;DP=746;FS=0.000;HRun=0;HaplotypeScore=82.1626;InbreedingCoeff=1.0000;MQ=81.12;MQ0=1;MQRankSum=-2.099;QD=48.11;ReadPosRankSum=2.751;VQSLOD=5.8051;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,129,1930	0/0:19,0:19:54.18:0,54,825	0/0:26,0:26:71.87:0,72,1003	0/0:21,0:21:57.16:0,57,823	0/0:19,0:19:57.18:0,57,851	0/0:21,0:21:63.18:0,63,921	0/0:29,0:29:87.26:0,87,1288	0/0:31,0:31:84.27:0,84,1246	0/0:27,0:27:78.23:0,78,1150	0/0:25,0:25:72.24:0,72,1068	0/0:18,0:18:51.17:0,51,780	0/0:39,0:39:99:0,111,1678	0/0:35,0:35:99:0,99,1488	0/0:26,0:26:72.20:0,72,1037	0/0:24,0:24:72.23:0,72,1079	0/0:26,0:26:78.25:0,78,1171	1/1:1,29:32:81.28:1564,81,0	1/1:0,29:29:78.27:1506,78,0	1/1:0,14:14:42.12:772,42,0	1/1:0,26:25:63.22:1215,63,0	1/1:1,26:27:57.20:1101,57,0	0/0:24,0:24:72.23:0,72,1080	0/0:25,0:25:75.24:0,75,1124	0/0:37,0:37:99:0,111,1673	0/0:27,0:27:78.26:0,78,1194	0/0:15,0:15:42.14:0,42,641	0/0:38,0:38:99:0,114,1744	0/0:19,0:19:57.14:0,57,806
chr10	30324281	.	CA	C	2695.35	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=12.569;DP=669;FS=4.371;HRun=7;HaplotypeScore=69.6475;InbreedingCoeff=0.9458;MQ=82.26;MQ0=0;MQRankSum=-1.073;QD=24.73;ReadPosRankSum=2.296;VQSLOD=4.3784;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:57.17:0,57,704	0/0:14,1:15:8.51:0,9,422	0/0:24,0:23:54.15:0,54,658	0/0:13,0:13:24.07:0,24,290	0/0:24,0:24:57.17:0,57,706	0/0:29,0:29:87.26:0,87,1069	0/0:31,0:31:87.27:0,87,1083	0/0:38,0:38:99:0,111,1389	0/0:27,0:27:72.22:0,72,894	0/0:30,0:30:81.24:0,81,990	0/0:15,0:15:36.11:0,36,451	0/0:28,0:28:78.24:0,78,968	0/0:35,0:35:96.76:0,97,1184	0/0:28,0:28:81.24:0,81,994	0/0:33,0:33:96.29:0,96,1183	0/0:23,0:23:54.17:0,54,679	1/1:1,23:24:60.14:612,60,0	1/1:1,19:20:54.12:551,54,0	1/1:2,21:23:63.12:635,63,0	1/1:5,20:25:57.12:581,57,0	1/1:1,16:17:48.11:490,48,0	0/0:20,0:20:54.17:0,54,679	0/0:16,0:16:45.13:0,45,547	0/0:34,0:34:89.84:0,90,1086	0/0:26,0:26:72.18:0,72,878	0/0:22,0:22:57.17:0,57,706	0/0:27,0:26:75.24:0,75,943	0/0:1,0:1:3.01:0,3,38
chr10	30324832	.	T	TAC	962.08	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=6.392;DP=388;FS=28.758;HRun=0;HaplotypeScore=65.9270;InbreedingCoeff=0.8927;MQ=70.14;MQ0=2;MQRankSum=-4.399;QD=22.37;ReadPosRankSum=-0.893;VQSLOD=1.7806;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:33.11:0,33,512	0/0:9,0:9:27.08:0,27,418	0/0:15,0:11:9.41:0,9,198	0/0:15,0:7:2.60:0,3,11	0/0:29,0:29:84.29:0,84,1348	0/0:13,0:13:39.12:0,39,614	0/0:8,0:8:24.08:0,24,392	0/0:32,0:32:93.30:0,93,1458	0/0:12,0:12:30.10:0,30,485	0/0:28,0:28:84.29:0,84,1358	0/0:14,0:14:42.14:0,42,684	0/0:16,0:16:45.15:0,45,720	0/0:11,0:11:30.08:0,30,454	0/0:10,0:10:30.10:0,30,487	0/0:16,0:16:48.15:0,48,739	0/0:8,0:8:24.08:0,24,386	1/1:0,1:8:6.02:74,6,0	1/1:1,2:3:9.01:95,9,0	1/1:1,8:12:33.01:353,33,0	1/1:4,10:14:42.07:453,42,0	1/1:3,3:6:12.04:150,12,0	0/0:7,0:7:18.06:0,18,294	0/0:10,0:10:30.09:0,30,467	0/0:5,0:5:12.03:0,12,170	0/0:26,0:26:72.23:0,72,1129	0/0:19,0:19:54.16:0,54,831	0/0:18,0:18:54.17:0,54,856	0/0:12,0:12:36.12:0,36,584
chr10	30324835	.	T	TG	315.22	PASS	AB=0.583;AC=9;AF=0.161;AN=56;BaseQRankSum=7.941;DP=378;FS=36.727;HRun=0;HaplotypeScore=59.6633;InbreedingCoeff=0.7881;MQ=72.38;MQ0=2;MQRankSum=-6.118;QD=9.27;ReadPosRankSum=0.753;VQSLOD=1.8035;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:30.06:0,30,395	0/0:9,0:9:27:0,27,351	0/0:18,0:13:10.30:0,10,158	0/0:18,0:7:5.67:0,6,34	0/0:29,0:29:78.07:0,78,1087	0/0:12,0:12:36.12:0,36,501	0/0:8,0:8:24.08:0,24,335	0/0:32,0:32:90.16:0,90,1122	0/0:11,0:11:30.09:0,30,403	0/0:27,0:27:81.25:0,81,1085	0/0:15,0:15:42.13:0,42,567	0/0:16,0:16:39.69:0,40,580	0/0:11,0:11:27.04:0,27,339	0/0:10,0:10:30.09:0,30,401	0/0:15,0:15:45.14:0,45,612	0/0:6,0:6:18.06:0,18,251	1/1:5,1:6:5.97:46,6,0	1/1:0,2:2:5.95:42,6,0	1/1:2,6:8:5.90:131,6,0	0/1:4,10:14:0.12:175,0,0	1/1:1,3:4:8.91:61,9,0	0/0:7,0:7:21.06:0,21,276	0/0:10,0:10:30.01:0,30,387	0/0:5,0:5:11.91:0,12,121	0/0:25,0:25:69.08:0,69,884	0/0:19,0:19:56.44:0,56,691	0/0:18,0:18:51.17:0,51,705	0/0:12,0:12:36.11:0,36,483
chr10	30324875	.	AT	A	3988.74	PASS	AB=1.000;AC=42;AF=0.955;AN=44;BaseQRankSum=-3.997;DP=272;FS=1.713;HRun=10;HaplotypeScore=38.1241;InbreedingCoeff=0.1835;MQ=70.79;MQ0=4;MQRankSum=-1.564;QD=14.77;ReadPosRankSum=2.957;VQSLOD=3.3595;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,11:15:26.92:234,27,0	1/1:1,3:4:9:78,9,0	0/1:17,0:9:6.88:7,0,87	0/1:24,0:10:4.12:4,0,29	1/1:8,11:19:2.80:253,3,0	1/1:2,7:9:20.99:182,21,0	1/1:2,2:4:5.99:52,6,0	1/1:8,18:26:53.96:469,54,0	1/1:2,8:10:20.99:182,21,0	1/1:6,14:20:41.95:361,42,0	1/1:5,8:13:20.98:182,21,0	1/1:1,8:9:16.81:136,17,0	1/1:1,6:7:14.98:130,15,0	1/1:1,2:3:5.99:52,6,0	1/1:2,10:12:26.99:234,27,0	1/1:1,4:5:12:104,12,0	./.	./.	./.	./.	./.	1/1:0,3:3:9:78,9,0	1/1:1,8:9:17.99:156,18,0	./.	1/1:6,12:18:26.99:234,27,0	1/1:3,17:20:47.96:416,48,0	1/1:2,12:14:32.99:286,33,0	1/1:3,6:9:17.99:156,18,0
chr10	30329082	.	CTATTAT	C	5235.74	PASS	AC=42;AF=0.778;AN=54;BaseQRankSum=-3.594;DP=418;FS=3.660;HRun=0;HaplotypeScore=102.5154;InbreedingCoeff=0.6999;MQ=61.02;MQ0=1;MQRankSum=2.951;QD=15.22;ReadPosRankSum=-0.736;VQSLOD=3.6616;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,20:26:5.97:115,6,0	1/1:2,5:7:6.02:127,6,0	./.	0/0:4,0:3:2.74:0,3,12	1/1:8,14:22:30.09:420,30,0	1/1:3,15:18:9.03:182,9,0	1/1:10,0:10:12.04:202,12,0	1/1:13,12:24:33.11:490,33,0	1/1:7,0:7:15.05:241,15,0	1/1:3,13:16:39.12:648,39,0	1/1:7,14:21:23.94:356,24,0	1/1:8,11:19:12.04:229,12,0	1/1:7,11:18:2.70:63,3,0	1/1:2,8:10:6.02:119,6,0	1/1:4,10:14:3.01:37,3,0	1/1:5,13:18:3.01:64,3,0	0/0:19,0:19:23.56:0,24,304	0/0:16,0:16:14.45:0,14,251	0/0:19,0:19:33.11:0,33,495	0/0:8,0:8:9.03:0,9,132	0/0:6,0:6:6.02:0,6,74	1/1:1,6:7:12.04:174,12,0	1/1:7,14:21:17.85:295,18,0	1/1:11,1:12:21.07:368,21,0	1/1:6,24:30:23.91:429,24,0	1/1:4,5:9:12.04:199,12,0	1/1:7,26:33:21.10:429,21,0	1/1:0,0:1:3.01:48,3,0
chr10	30329228	.	A	AGT	1656.10	PASS	AB=0.873;AC=29;AF=0.580;AN=50;BaseQRankSum=-6.277;DP=506;FS=13.728;HRun=0;HaplotypeScore=75.0946;InbreedingCoeff=0.1202;MQ=69.42;MQ0=18;MQRankSum=1.474;QD=5.31;ReadPosRankSum=-2.529;VQSLOD=1.0869;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:23,1:24:11.88:70,0,12	1/1:2,0:2:2.99:24,3,0	./.	./.	0/1:22,0:22:66.78:67,0,94	0/0:24,0:23:27.16:0,27,242	0/1:17,5:24:70.55:71,0,85	0/1:27,0:23:0:0,0,0	0/1:18,2:20:32.99:98,0,33	1/1:12,5:16:11.91:127,12,0	0/1:10,4:13:26.15:38,0,26	0/0:6,0:17:17.04:0,17,84	1/1:13,0:13:9.47:93,9,0	1/1:12,1:11:2.89:23,3,0	1/1:13,2:14:6.02:88,6,0	1/1:7,8:17:1.58:269,2,0	0/0:15,0:33:36.93:0,37,182	0/0:13,0:24:19.89:0,20,98	./.	0/0:7,0:10:5.68:0,6,28	0/0:17,0:18:5.61:0,6,48	1/1:6,2:8:9.03:132,9,0	1/1:6,0:6:2.99:24,3,0	0/1:14,6:21:11.34:116,0,11	0/1:18,1:18:99:108,0,126	1/1:5,8:13:20.81:206,21,0	0/1:17,11:28:59.70:238,0,60	1/1:7,0:5:2.99:23,3,0
chr10	30329675	.	GTT	G	3602.94	PASS	AC=10;AF=0.185;AN=54;BaseQRankSum=11.219;DP=610;FS=0.813;HRun=10;HaplotypeScore=84.1214;InbreedingCoeff=0.9985;MQ=72.51;MQ0=2;MQRankSum=-2.643;QD=28.37;ReadPosRankSum=0.088;VQSLOD=3.8657;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:40:99:0,110,1669	0/0:8,0:8:24.08:0,24,381	0/0:16,0:16:28.20:0,28,376	0/0:17,0:16:22.33:0,22,344	0/0:20,0:20:57.17:0,57,862	0/0:30,0:30:81.26:0,81,1263	0/0:19,0:19:42.14:0,42,656	0/0:22,0:24:56.15:0,56,799	0/0:25,0:26:74.73:0,75,1124	0/0:18,0:20:59.17:0,59,874	0/0:21,0:21:54.17:0,54,835	0/0:27,0:29:86.75:0,87,1267	0/0:20,0:20:57.19:0,57,897	0/0:25,0:26:68.72:0,69,1054	0/0:21,0:22:62.70:0,63,959	0/0:17,0:18:48.16:0,48,735	1/1:0,31:30:81.22:903,81,0	1/1:1,29:30:81.22:903,81,0	1/1:6,21:27:60.14:660,60,0	1/1:0,14:14:42.11:468,42,0	1/1:3,22:25:60.15:669,60,0	0/0:22,0:22:57.19:0,57,893	0/0:13,0:13:30.10:0,30,471	0/0:26,0:26:72.24:0,72,1125	0/0:20,0:20:51.16:0,51,787	0/0:16,0:18:50.65:0,51,752	0/0:26,0:26:78.19:0,78,1187	./.
chr10	30337325	.	CTG	C	4568.45	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=13.158;DP=738;FS=3.465;HRun=0;HaplotypeScore=83.7917;InbreedingCoeff=0.9979;MQ=89.02;MQ0=1;MQRankSum=-4.085;QD=42.30;ReadPosRankSum=2.816;VQSLOD=6.6671;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,114,2163	0/0:6,0:6:18.06:0,18,348	0/0:31,0:31:90.27:0,90,1573	0/0:24,0:24:66.19:0,66,1177	0/0:37,0:37:99:0,111,2131	0/0:30,0:29:87.30:0,87,1667	0/0:19,0:19:57.20:0,57,1066	0/0:49,0:49:99:0,141,2722	0/0:21,0:21:60.21:0,60,1159	0/0:32,0:32:93.32:0,93,1793	0/0:26,0:26:78.25:0,78,1446	0/0:25,0:25:75.24:0,75,1416	0/0:34,0:34:93.32:0,93,1797	0/0:19,0:19:57.20:0,57,1101	0/0:26,0:26:78.27:0,78,1482	0/0:29,0:29:87.28:0,87,1605	1/1:0,12:12:30.10:459,30,0	1/1:0,11:11:33.11:505,33,0	1/1:3,16:19:48.16:735,48,0	1/1:0,37:37:99:1628,108,0	1/1:1,28:29:81.28:1241,81,0	0/0:27,0:27:81.28:0,81,1553	0/0:23,0:23:69.24:0,69,1333	0/0:19,0:19:57.20:0,57,1101	0/0:31,0:31:93.29:0,93,1706	0/0:35,0:35:99:0,105,2017	0/0:34,0:33:99:0,102,1957	0/0:13,0:13:33.11:0,33,623
chr10	30338629	.	C	CCA	528.90	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=4.290;DP=503;FS=1.463;HRun=0;HaplotypeScore=73.7070;InbreedingCoeff=0.5159;MQ=61.82;MQ0=15;MQRankSum=-1.981;QD=2.66;ReadPosRankSum=-1.541;VQSLOD=1.8113;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:35:31.46:0,31,319	1/1:4,0:4:5.99:48,6,0	1/1:35,0:17:0.89:2,1,0	0/1:25,0:16:0.99:1,0,9	0/0:22,0:21:2.81:0,3,156	0/0:23,0:22:32.91:0,33,263	0/0:18,0:18:17.97:0,18,149	0/1:24,0:24:8.70:9,0,68	0/0:19,0:18:26.94:0,27,219	0/0:18,0:18:12.01:0,12,111	0/0:10,0:10:26.91:0,27,210	0/0:14,0:14:26.92:0,27,217	0/0:21,0:21:35.93:0,36,303	0/0:14,0:14:20.90:0,21,161	0/0:26,0:26:29.89:0,30,257	0/0:20,0:20:32.88:0,33,261	1/1:12,12:24:7.05:57,7,0	0/1:12,0:11:1.04:84,0,1	1/1:14,1:15:25.77:207,26,0	1/1:20,0:18:19.05:156,19,0	1/1:12,0:11:8.97:70,9,0	0/1:13,0:13:23.61:24,0,80	0/0:13,0:13:11.66:0,12,86	0/0:16,0:14:29.91:0,30,250	0/0:12,0:12:20.94:0,21,170	0/1:15,0:15:40.06:40,0,138	0/0:17,0:16:20.67:0,21,178	0/0:4,0:4:2.98:0,3,22
chr10	30338660	.	CAG	C	1765.07	PASS	AB=0.975;AC=25;AF=0.481;AN=52;BaseQRankSum=2.229;DP=575;FS=10.579;HRun=0;HaplotypeScore=97.8586;InbreedingCoeff=0.2507;MQ=52.17;MQ0=29;MQRankSum=4.660;QD=4.40;ReadPosRankSum=0.485;VQSLOD=2.0259;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:44,0:41:37.02:37,0,259	1/1:8,0:8:14.81:98,15,0	./.	./.	1/1:26,0:25:29.70:222,30,0	0/1:26,0:24:18.24:18,0,100	0/1:24,0:24:36.23:36,0,107	1/1:19,0:15:2.43:18,2,0	1/1:25,0:24:45.87:342,46,0	1/1:7,20:27:56.73:451,57,0	1/1:21,0:21:29.74:231,30,0	1/1:26,0:26:35.65:247,36,0	0/0:20,0:20:11.42:0,11,200	0/1:17,0:17:26.80:27,0,155	0/1:32,0:31:34.18:34,0,282	1/1:19,0:18:17.80:135,18,0	0/0:25,0:25:22.62:0,23,155	0/0:17,0:16:9.85:0,10,68	0/0:14,0:14:14.92:0,15,122	0/0:23,0:21:13.89:0,14,73	0/0:12,0:10:2.99:0,3,23	0/1:7,0:18:8.62:9,0,87	0/1:17,7:22:9.50:9,0,122	0/1:17,0:15:5.48:5,0,145	0/0:20,0:19:23.95:0,24,215	0/1:27,0:26:26.52:27,0,206	0/0:20,0:22:7.87:0,8,184	0/0:8,0:7:11.96:0,12,93
chr10	30338690	.	G	GAGAGAGAA	1695.04	PASS	AB=0.815;AC=8;AF=0.143;AN=56;BaseQRankSum=5.001;DP=601;FS=2.226;HRun=0;HaplotypeScore=170.1869;InbreedingCoeff=0.7086;MQ=57.33;MQ0=26;MQRankSum=-1.959;QD=19.94;ReadPosRankSum=-1.816;VQSLOD=3.1524;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:38:81.02:0,81,1499	0/0:7,0:7:21.04:0,21,355	0/0:11,0:9:12.79:0,13,176	0/0:21,0:17:51.03:0,51,504	0/0:28,0:28:62.87:0,63,921	0/0:25,0:23:49.27:0,49,828	0/0:20,0:20:32.77:0,33,710	0/0:34,0:31:78.19:0,78,662	0/0:25,0:24:48.99:0,49,1046	0/0:33,0:33:84.12:0,84,1495	0/0:18,0:18:38.95:0,39,666	0/0:25,0:25:44.75:0,45,799	0/0:19,0:19:51.05:0,51,892	0/0:18,0:18:51.08:0,51,933	0/0:27,0:25:63.13:0,63,1322	0/0:14,0:12:23.84:0,24,348	1/1:23,0:23:34.53:717,35,0	0/1:17,0:16:7.47:345,0,7	0/1:7,2:15:8.52:485,0,9	1/1:6,15:21:20.21:195,20,0	1/1:5,0:4:6.01:101,6,0	0/0:20,0:20:32.92:0,33,422	0/0:20,0:18:26.60:0,27,654	0/0:15,0:13:29.96:0,30,524	0/0:19,0:18:36.02:0,36,505	0/0:32,0:31:81.14:0,81,1135	0/0:34,0:33:83.97:0,84,1128	0/0:11,0:9:15:0,15,235
chr10	30340083	.	C	CAG	4245.72	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=1.698;DP=813;FS=6.161;HRun=0;HaplotypeScore=105.8722;InbreedingCoeff=0.9981;MQ=67.59;MQ0=0;MQRankSum=-5.952;QD=41.22;ReadPosRankSum=-0.183;VQSLOD=6.3435;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:87.19:0,87,1404	0/0:14,0:14:42.14:0,42,641	0/0:26,0:25:60.57:0,61,826	0/0:21,0:22:62.71:0,63,813	0/0:29,0:29:83.77:0,84,1207	0/0:25,0:25:66.18:0,66,943	0/0:26,0:26:72.16:0,72,991	0/0:49,0:49:99:0,135,1836	0/0:32,0:32:93.29:0,93,1377	0/0:35,0:35:99:0,99,1411	0/0:35,0:35:99:0,105,1557	0/0:38,0:38:99:0,111,1629	0/0:29,0:29:84.24:0,84,1218	0/0:38,0:38:99:0,108,1562	0/0:36,0:36:99:0,108,1537	0/0:29,0:29:84.22:0,84,1196	1/1:3,9:12:27.05:481,27,0	1/1:2,8:10:21.07:404,21,0	1/1:6,21:27:69.14:1219,69,0	1/1:9,22:31:83.92:1472,84,0	1/1:6,17:23:27.49:670,27,0	0/0:30,0:30:87.21:0,87,1213	0/0:32,0:32:93.27:0,93,1352	0/0:45,0:45:99:0,129,1849	0/0:36,0:36:93.24:0,93,1315	0/0:31,0:31:90.26:0,90,1276	0/0:30,0:30:87.26:0,87,1281	0/0:8,0:8:23.99:0,24,255
chr10	30340124	.	TAC	T	2591.63	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=12.740;DP=877;FS=7.557;HRun=0;HaplotypeScore=138.5505;InbreedingCoeff=0.9890;MQ=64.34;MQ0=0;MQRankSum=-9.398;QD=26.45;ReadPosRankSum=-3.003;VQSLOD=3.9237;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,102,1599	0/0:12,0:12:33.10:0,33,535	0/0:43,0:38:76.13:0,76,1317	0/0:41,0:36:83.20:0,83,1229	0/0:22,0:22:63.22:0,63,1067	0/0:31,0:31:84.23:0,84,1361	0/0:32,0:32:84.29:0,84,1428	0/0:43,0:43:99:0,99,1607	0/0:34,0:34:90.26:0,90,1470	0/0:32,0:32:78.25:0,78,1278	0/0:37,0:37:96.31:0,96,1598	0/0:43,0:43:99:0,127,2097	0/0:30,1:31:45.24:0,45,1283	0/0:34,0:34:99:0,99,1614	0/0:42,0:42:99:0,120,1981	0/0:31,0:31:93.30:0,93,1542	1/1:2,8:9:15.05:191,15,0	1/1:2,6:8:12.04:156,12,0	1/1:7,12:19:51.09:625,51,0	1/1:7,33:40:99:1253,102,0	1/1:4,17:21:42.13:538,42,0	0/0:36,0:36:93.17:0,93,1518	0/0:28,0:28:72.22:0,72,1186	0/0:52,0:52:99:0,144,2388	0/0:33,0:33:84.29:0,84,1429	0/0:36,0:36:99:0,99,1632	0/0:29,0:29:75.24:0,75,1248	0/0:18,0:18:51.17:0,51,867
chr10	30340188	.	CAG	C	624.26	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=9.659;DP=877;FS=0.000;HRun=0;HaplotypeScore=138.3941;InbreedingCoeff=0.9890;MQ=56.74;MQ0=18;MQRankSum=-4.877;QD=6.94;ReadPosRankSum=-3.254;VQSLOD=2.4914;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,143,2463	0/0:15,0:15:45.14:0,45,820	0/0:49,0:18:53.84:0,54,782	0/0:60,0:12:33.10:0,33,492	0/0:29,0:29:77.68:0,78,1285	0/0:32,0:32:72.01:0,72,1256	0/0:27,0:27:69.18:0,69,1179	0/0:45,0:44:99:0,107,1889	0/0:37,0:37:99:0,102,1563	0/0:25,0:25:74.58:0,75,1287	0/0:23,0:23:68.26:0,68,999	0/0:39,0:39:99:0,102,1531	0/0:28,0:28:72.86:0,73,1124	0/0:35,0:35:99:0,99,1755	0/0:38,0:38:93.18:0,93,1551	0/0:44,0:44:99:0,117,1916	1/1:11,3:14:12.16:82,12,0	1/1:8,3:11:20.83:157,21,0	1/1:8,1:9:26.76:199,27,0	1/1:21,8:29:17.70:147,18,0	1/1:25,2:25:23.97:210,24,0	0/0:30,0:30:79.43:0,79,1326	0/0:24,0:24:63.08:0,63,1004	0/0:54,0:54:99:0,153,2650	0/0:23,0:23:69.13:0,69,1158	0/0:32,0:32:82.58:0,83,1646	0/0:30,0:30:86.60:0,87,1379	0/0:12,0:12:30.10:0,30,552
chr10	30340194	.	CAG	C	807.02	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=13.384;DP=860;FS=3.805;HRun=0;HaplotypeScore=133.9583;InbreedingCoeff=0.9927;MQ=55.73;MQ0=20;MQRankSum=-3.893;QD=7.91;ReadPosRankSum=-3.237;VQSLOD=2.7334;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:56:99:0,100,1927	0/0:16,0:16:44.99:0,45,592	0/0:42,0:19:24.01:0,24,336	0/0:58,0:10:18.93:0,19,198	0/0:26,0:26:63.84:0,64,1028	0/0:28,0:27:47.72:0,48,777	0/0:25,0:25:46.81:0,47,955	0/0:48,0:47:56.74:0,57,1365	0/0:31,0:31:67.04:0,67,1286	0/0:25,0:25:63.66:0,64,891	0/0:19,0:19:43.80:0,44,651	0/0:33,0:33:34.92:0,35,1063	0/0:25,0:25:54.70:0,55,936	0/0:37,0:37:51.48:0,51,1335	0/0:38,0:38:76.78:0,77,1419	0/0:40,0:40:80.55:0,81,1687	1/1:15,2:17:17.74:127,18,0	1/1:12,2:14:35.73:268,36,0	1/1:10,1:11:32.45:225,32,0	1/1:23,7:30:18.17:150,18,0	1/1:29,1:27:23.54:212,24,0	0/0:27,0:27:74.57:0,75,1128	0/0:29,0:29:78.10:0,78,1091	0/0:53,0:53:99:0,103,2033	0/0:22,0:22:63.07:0,63,849	0/0:35,0:35:58.61:0,59,1176	0/0:27,0:27:65.52:0,66,1064	0/0:13,0:13:21.87:0,22,385
chr10	30340196	.	GAC	G	295.88	PASS	AB=0.928;AC=19;AF=0.339;AN=56;BaseQRankSum=7.041;DP=844;FS=0.000;HRun=0;HaplotypeScore=130.3092;InbreedingCoeff=-0.2904;MQ=55.85;MQ0=20;MQRankSum=-0.390;QD=0.55;ReadPosRankSum=-0.489;VQSLOD=2.2637;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:52,2:56:42.47:42,0,1272	0/0:17,0:17:24.75:0,25,431	0/0:40,0:18:0.54:0,1,87	0/0:60,0:12:9.57:0,10,82	0/0:27,0:27:19.14:0,19,627	0/1:25,2:26:1.83:2,0,402	0/1:21,4:26:12.47:12,0,675	0/1:40,8:47:99:126,0,809	0/1:28,2:30:0.39:0,0,910	0/1:23,0:23:23.73:24,0,398	0/1:16,1:17:1.73:2,0,389	0/1:24,6:30:44.19:44,0,706	0/0:22,2:24:16.34:0,16,680	0/1:31,6:37:61.09:61,0,903	0/0:32,5:37:8.61:0,9,1025	0/1:35,5:40:11.26:11,0,1114	0/1:15,0:15:6.54:7,0,13	1/1:14,0:14:2.34:17,2,0	0/1:11,0:11:2.26:6,0,2	0/1:29,0:29:5.79:6,0,18	0/1:31,0:28:11.08:20,0,11	0/0:28,0:28:31.27:0,31,771	0/0:28,0:28:54.13:0,54,786	0/1:48,4:52:34.06:34,0,1323	0/0:21,0:21:33.75:0,34,503	0/1:32,2:34:9.68:10,0,698	0/0:27,0:27:11.73:0,12,761	0/1:11,2:13:16.75:17,0,216
chr10	30342521	.	TA	T	1808.27	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=10.436;DP=579;FS=4.483;HRun=11;HaplotypeScore=62.8730;InbreedingCoeff=0.9237;MQ=66.44;MQ0=0;MQRankSum=-1.590;QD=19.66;ReadPosRankSum=1.803;VQSLOD=4.9200;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:68.51:0,69,899	0/0:10,0:10:27.07:0,27,288	0/0:17,0:16:31.12:0,31,251	0/0:13,0:11:7.91:0,8,88	0/0:28,0:28:29.91:0,30,690	0/0:23,1:24:41.53:0,42,647	0/0:19,0:19:51.12:0,51,537	0/0:32,0:32:78.12:0,78,801	0/0:16,0:16:42.08:0,42,437	0/0:27,0:27:75.10:0,75,761	0/0:19,1:20:29.46:0,29,507	0/0:16,0:16:39.06:0,39,404	0/0:19,0:19:48.09:0,48,491	0/0:21,0:21:57.13:0,57,600	0/0:29,0:29:78.06:0,78,815	0/0:16,1:17:23.45:0,23,436	1/1:3,21:24:59.93:492,60,0	1/1:0,10:10:29.93:240,30,0	1/1:0,18:19:55.94:443,56,0	1/1:7,21:28:74.02:585,74,0	1/1:2,9:11:26.97:222,27,0	0/0:22,0:22:57.13:0,57,600	0/0:17,2:19:1.85:0,2,430	0/0:17,0:17:48.12:0,48,512	0/0:25,0:25:69.14:0,69,716	0/0:26,0:25:63.13:0,63,658	0/0:31,1:32:67.61:0,68,900	0/0:5,0:5:9.02:0,9,96
chr10	30342591	.	AAGGAAGTAGGG	A	5297.59	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=11.263;DP=595;FS=1.052;HRun=0;HaplotypeScore=190.1194;InbreedingCoeff=0.9922;MQ=78.86;MQ0=0;MQRankSum=-10.928;QD=75.68;ReadPosRankSum=1.379;VQSLOD=4.8963;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:99:0,99,4663	0/0:10,0:10:30.10:0,30,1652	0/0:20,0:19:51.17:0,51,2179	0/0:21,0:21:53.43:0,53,2380	0/0:37,0:37:99:0,105,5606	0/0:21,0:21:60.15:0,60,2641	0/0:25,0:25:69.22:0,69,3549	0/0:29,0:29:81.27:0,81,3933	0/0:18,0:18:51.16:0,51,2630	0/0:32,0:32:96.32:0,96,5035	0/0:19,0:19:54.19:0,54,2996	0/0:23,0:23:69.22:0,69,3542	0/0:21,0:21:57.20:0,57,3118	0/0:24,0:24:69.22:0,69,3534	0/0:29,0:29:87.30:0,87,4910	0/0:30,0:30:87.30:0,87,4749	1/1:3,8:11:29.94:806,30,0	1/1:1,6:7:15.05:535,15,0	1/1:0,10:10:30.09:952,30,0	1/1:5,24:29:72.11:2323,72,0	1/1:7,6:12:32.79:681,33,0	0/0:22,0:22:63.18:0,63,3076	0/0:16,0:16:48.15:0,48,2464	0/0:18,0:18:54.13:0,54,2550	0/0:21,0:21:60.21:0,60,2987	0/0:26,0:25:72.24:0,72,3770	0/0:25,0:25:75.24:0,75,4065	0/0:5,0:5:15.05:0,15,865
chr10	30343258	.	A	AT	18853.99	PASS	AB=0.553;AC=51;AF=0.911;AN=56;BaseQRankSum=-5.630;DP=707;FS=8.426;HRun=8;HaplotypeScore=82.1898;InbreedingCoeff=0.7965;MQ=81.55;MQ0=0;MQRankSum=-8.953;QD=28.35;ReadPosRankSum=5.950;VQSLOD=4.2580;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,20:23:32.54:597,33,0	1/1:1,11:12:27.08:312,27,0	0/0:17,0:19:36.99:0,37,294	0/0:23,0:23:29.15:0,29,445	1/1:5,31:36:90.01:957,90,0	1/1:3,35:38:99:1142,99,0	1/1:3,19:22:51.11:574,51,0	1/1:10,32:43:99:1096,99,0	1/1:4,16:20:48.10:539,48,0	1/1:3,32:35:93.26:1064,93,0	1/1:0,31:31:90.18:1009,90,0	1/1:1,25:26:72.21:831,72,0	1/1:0,23:23:51.15:589,51,0	1/1:5,19:24:57.17:654,57,0	1/1:2,29:31:90:1016,90,0	1/1:3,19:22:42.11:485,42,0	1/1:2,19:21:63.16:715,63,0	1/1:0,12:12:33.10:381,33,0	1/1:5,23:28:66.15:731,66,0	1/1:0,23:23:63.07:684,63,0	1/1:2,12:15:35.94:395,36,0	1/1:1,21:22:63.14:711,63,0	0/1:4,17:21:9.68:405,0,10	1/1:1,16:17:48.14:554,48,0	1/1:3,32:35:87.26:1004,87,0	1/1:8,32:40:99:1121,99,0	1/1:2,34:37:90.05:1012,90,0	1/1:0,8:8:24.07:277,24,0
chr10	30343755	.	C	CTGTGTGTGTGTG	3641.61	PASS	AB=0.987;AC=24;AF=0.429;AN=56;BaseQRankSum=1.815;DP=561;FS=0.000;HRun=0;HaplotypeScore=138.9364;InbreedingCoeff=-0.0613;MQ=47.71;MQ0=17;MQRankSum=-5.991;QD=9.22;ReadPosRankSum=1.604;VQSLOD=2.4344;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:25:15.15:104,0,15	0/0:10,0:6:2.59:0,3,13	0/0:19,0:12:27.09:0,27,681	0/0:16,0:10:20.06:0,20,505	1/1:25,0:27:2.71:21,3,0	0/1:26,0:24:9.28:89,0,9	0/0:15,0:15:5.18:0,5,48	0/0:9,0:6:5.78:0,6,37	1/1:18,0:16:3.01:145,3,0	0/1:20,0:18:44.29:722,0,44	1/1:13,0:12:4.07:11,4,0	0/1:15,0:14:35.89:170,0,36	0/1:32,0:32:57.74:320,0,58	0/1:25,0:25:36.03:280,0,36	0/1:35,0:34:55.56:208,0,56	1/1:16,0:16:5.05:85,5,0	0/1:22,0:22:4.61:5,0,808	0/0:15,0:13:30:0,30,537	0/0:20,0:19:43.31:0,43,838	0/0:26,0:25:45.08:0,45,952	0/0:21,0:19:44.84:0,45,1199	0/1:23,0:22:0.67:1,0,19	1/1:15,0:15:1.32:5,1,0	1/1:19,0:18:0.23:0,0,0	0/0:4,8:14:2.73:0,3,19	0/1:17,0:15:46.34:806,0,46	0/1:37,0:37:26.20:623,0,26	0/1:3,0:3:14.15:49,0,14
chr10	30343757	.	C	CTGTGTGTGTGTGTGTG	9545.53	PASS	AB=0.863;AC=37;AF=0.685;AN=54;BaseQRankSum=-7.439;DP=669;FS=9.906;HRun=0;HaplotypeScore=195.5913;InbreedingCoeff=0.5127;MQ=48.06;MQ0=16;MQRankSum=-5.398;QD=17.81;ReadPosRankSum=-1.974;VQSLOD=2.8607;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:15,12:27:2.80:177,3,0	./.	0/0:22,0:15:29.90:0,30,886	0/0:19,0:12:6.94:0,7,615	0/1:14,0:29:0:0,0,0	1/1:14,11:28:2.10:150,2,0	0/0:7,0:20:0.02:0,0,0	1/1:19,0:15:33.11:1286,33,0	1/1:6,13:20:3.01:222,3,0	1/1:12,7:27:57.12:2034,57,0	0/1:8,5:16:0.07:0,0,0	1/1:9,11:18:9.03:423,9,0	1/1:11,20:36:9.03:590,9,0	1/1:13,13:28:9.03:430,9,0	1/1:20,21:46:8.91:356,9,0	1/1:8,11:24:6.96:317,7,0	0/1:22,0:22:29.74:30,0,869	0/0:16,0:14:20.90:0,21,459	0/1:22,0:21:10.48:10,0,766	0/0:24,0:23:36.17:0,36,963	0/0:21,0:19:41.92:0,42,1322	1/1:9,15:25:0.94:1,1,0	1/1:4,10:16:0.10:0,0,0	1/1:10,10:21:0.12:1,0,0	0/1:21,0:20:0:0,0,0	1/1:11,7:23:45.63:1925,46,0	1/1:15,0:44:33.09:1430,33,0	1/1:4,0:4:8.90:165,9,0
chr10	30344055	.	A	ATGAATGAG	12698.15	PASS	AB=1.000;AC=31;AF=0.554;AN=56;BaseQRankSum=7.768;DP=605;FS=13.913;HRun=0;HaplotypeScore=140.9166;InbreedingCoeff=-0.5254;MQ=57.25;MQ0=0;MQRankSum=-9.769;QD=21.97;ReadPosRankSum=10.370;VQSLOD=2.0196;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:17,0:17:63.43:238,0,63	0/1:8,0:7:49.94:72,0,50	0/0:18,0:18:44.65:0,45,634	0/0:9,0:8:14.20:0,14,250	0/1:24,0:23:99:313,0,188	0/1:22,0:22:41.88:489,0,42	0/1:18,0:18:99:140,0,176	0/1:43,0:43:99:174,0,297	0/1:23,0:23:99:389,0,144	0/1:29,0:29:99:946,0,204	0/1:27,0:27:12.74:606,0,13	0/1:34,0:34:99:459,0,188	0/1:23,0:23:85.80:724,0,86	0/1:21,0:21:54.88:411,0,55	0/1:25,0:25:99:393,0,142	0/1:29,0:29:99:389,0,175	1/1:0,0:12:11.96:297,12,0	0/1:6,0:6:4.54:156,0,5	1/1:3,15:22:57.06:1424,57,0	1/1:2,25:27:56.73:1687,57,0	1/1:10,0:10:23.86:352,24,0	0/1:14,0:14:74.02:314,0,74	0/1:24,0:24:99:155,0,99	0/1:17,0:17:24.46:24,0,88	0/1:21,0:21:40.90:398,0,41	0/1:36,0:36:99:1100,0,145	0/1:45,0:44:99:961,0,212	1/1:1,0:1:3.01:84,3,0
chr10	30345003	.	TACACAC	T	676.39	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-2.467;DP=440;FS=7.822;HRun=0;HaplotypeScore=143.2158;InbreedingCoeff=0.7956;MQ=65.45;MQ0=16;MQRankSum=-5.220;QD=16.10;ReadPosRankSum=1.836;VQSLOD=2.8594;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:18.06:0,18,237	0/0:7,0:7:18.06:0,18,277	0/0:46,0:17:19.88:0,20,421	0/0:43,0:14:21.07:0,21,598	0/0:16,0:16:22.96:0,23,273	0/0:9,0:9:15.05:0,15,196	0/0:13,0:13:24.08:0,24,327	0/0:17,0:26:16.88:0,17,379	0/0:11,0:11:12.04:0,12,195	0/0:21,0:21:51.17:0,51,800	0/0:15,0:15:20.61:0,21,331	0/0:11,0:11:24.55:0,25,364	0/0:12,0:12:24.04:0,24,325	0/0:15,0:14:21.01:0,21,258	0/0:12,0:12:27.09:0,27,408	0/0:19,0:19:36.12:0,36,561	1/1:6,11:18:27.09:569,27,0	1/1:5,3:8:9.03:195,9,0	1/1:5,0:5:3.01:36,3,0	0/0:6,10:16:0.35:0,0,0	1/1:10,1:10:0.47:1,0,0	0/0:14,0:14:22.56:0,23,259	0/0:10,0:10:18.06:0,18,274	0/0:12,0:13:15.05:0,15,215	0/0:12,0:12:23.99:0,24,298	0/0:17,0:17:48.13:0,48,812	0/0:15,0:14:27.08:0,27,469	0/0:8,0:8:15.05:0,15,260
chr10	30345021	.	C	CGTGTGT	2413.89	PASS	AB=0.970;AC=23;AF=0.411;AN=56;BaseQRankSum=-1.543;DP=478;FS=7.331;HRun=0;HaplotypeScore=150.4045;InbreedingCoeff=-0.4105;MQ=44.24;MQ0=22;MQRankSum=-2.657;QD=7.18;ReadPosRankSum=-5.806;VQSLOD=-0.4203;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:24:21.22:21,0,29	0/0:7,0:6:10.65:0,11,38	0/0:34,0:6:15:0,15,224	0/0:37,0:10:21:0,21,381	0/0:20,1:20:15.88:0,16,77	0/1:13,0:13:25.04:103,0,25	0/1:16,0:16:35.75:112,0,36	0/1:21,0:22:99:132,0,276	0/0:9,0:9:7.36:0,7,26	0/1:26,0:25:99:123,0,266	0/0:25,0:24:12.97:0,13,54	0/1:15,0:15:16.71:299,0,17	0/1:12,0:12:11.05:280,0,11	0/1:17,0:16:19.62:23,0,20	0/1:13,1:13:15.47:180,0,15	0/1:18,1:20:72.19:155,0,72	0/1:21,0:19:99:129,0,177	0/0:8,0:7:18.02:0,18,192	0/1:7,0:7:99:120,0,161	0/1:12,0:12:0:0,0,0	1/1:9,0:7:1.24:3,1,0	0/1:13,1:15:17.43:57,0,17	0/1:14,0:14:1.36:1,0,17	1/1:12,0:12:1.39:66,1,0	0/1:10,1:11:14.57:90,0,15	0/1:25,0:25:99:158,0,321	0/1:19,1:19:33.13:343,0,33	0/1:8,2:10:79.26:171,0,79
chr10	30345023	.	C	CGTGTGTGT	4721.33	PASS	AB=0.892;AC=45;AF=0.938;AN=48;BaseQRankSum=-3.292;DP=532;FS=8.623;HRun=0;HaplotypeScore=180.7329;InbreedingCoeff=0.2951;MQ=41.25;MQ0=23;MQRankSum=-0.374;QD=10.20;ReadPosRankSum=0.483;VQSLOD=3.3189;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:24,2:25:9.01:107,9,0	1/1:8,0:8:5.46:74,5,0	./.	0/1:38,0:11:0:0,0,0	1/1:17,5:22:0.47:1,0,0	1/1:12,1:14:9.03:250,9,0	1/1:16,1:17:5.16:121,5,0	1/1:31,0:31:33.15:692,33,0	./.	1/1:22,1:24:22.39:461,22,0	1/1:20,4:24:1.95:10,2,0	1/1:12,3:17:11.91:434,12,0	1/1:9,2:13:12.41:307,12,0	1/1:14,1:16:2.22:7,2,0	1/1:15,0:14:9.03:178,9,0	1/1:24,0:24:2.55:131,3,0	1/1:19,0:20:8.06:227,8,0	1/1:10,0:11:1.96:51,2,0	1/1:9,0:11:12.30:308,12,0	./.	1/1:14,0:11:0.89:2,1,0	0/1:15,1:17:0:0,0,0	0/1:13,4:18:0:1,0,0	./.	1/1:15,0:15:0.95:82,1,0	1/1:20,4:26:22.75:486,23,0	1/1:18,3:20:20.66:587,21,0	1/1:11,0:11:10.21:206,10,0
chr10	30347057	.	T	TG	13224.35	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-13.125;DP=604;FS=6.516;HRun=7;HaplotypeScore=54.0781;InbreedingCoeff=0.9709;MQ=86.98;MQ0=0;MQRankSum=-3.979;QD=30.19;ReadPosRankSum=5.115;VQSLOD=4.9516;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,22:28:51.16:616,51,0	1/1:0,12:12:33.10:399,33,0	0/0:29,0:29:63.76:0,64,595	0/0:14,0:14:26.16:0,26,269	1/1:3,17:20:51.16:615,51,0	1/1:5,20:25:51.16:616,51,0	1/1:3,14:17:39.12:471,39,0	0/0:21,0:21:42.04:0,42,401	1/1:1,18:19:51.16:616,51,0	1/1:3,24:27:78.23:923,78,0	1/1:5,28:33:87.26:1039,87,0	1/1:3,25:28:63.19:761,63,0	1/1:3,24:27:75.23:905,75,0	1/1:0,23:23:66.20:797,66,0	1/1:0,16:16:48.15:580,48,0	1/1:5,19:24:51.16:616,51,0	0/0:27,0:27:63.09:0,63,608	0/0:23,0:23:57.09:0,57,550	0/0:20,0:20:48.06:0,48,459	0/0:20,0:20:51.08:0,51,493	0/0:12,0:12:36.06:0,36,348	1/1:0,20:20:57.09:669,57,0	1/1:5,17:22:55.97:646,56,0	1/1:1,22:23:66.20:797,66,0	1/1:1,21:23:57.15:675,57,0	1/1:5,23:28:69.16:796,69,0	1/1:3,19:21:54.17:650,54,0	1/1:0,1:1:3.01:36,3,0
chr10	30348954	.	GCTCTCTCT	G	3707.34	PASS	AB=0.975;AC=25;AF=0.658;AN=38;BaseQRankSum=1.754;DP=591;FS=67.124;HRun=0;HaplotypeScore=147.6117;InbreedingCoeff=0.2262;MQ=76.32;MQ0=24;MQRankSum=3.489;QD=12.87;ReadPosRankSum=4.187;VQSLOD=0.5454;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:17,10:25:1.25:3,1,0	1/1:7,0:7:12.04:266,12,0	./.	0/0:37,0:22:0.47:0,0,1	./.	./.	./.	0/0:39,0:39:24.51:0,25,540	0/1:21,0:23:14.94:139,0,15	1/1:11,12:22:31.38:639,31,0	./.	./.	0/1:22,0:22:34.33:527,0,34	1/1:11,0:11:21.07:504,21,0	./.	1/1:20,2:22:24.08:579,24,0	0/1:24,0:23:18.24:18,0,460	0/0:14,0:12:13.98:0,14,198	0/1:21,0:22:45.95:46,0,158	0/1:25,0:25:26.87:68,0,27	0/0:25,0:23:12.04:0,12,281	./.	1/1:9,6:15:3.01:73,3,0	./.	1/1:10,0:9:9.02:174,9,0	1/1:13,7:20:24.07:469,24,0	1/1:10,12:23:5.65:129,6,0	1/1:12,0:11:3.01:73,3,0
chr10	30351668	.	G	GA	51.56	PASS	AC=4;AF=0.50;AN=8;BaseQRankSum=2.335;DP=112;FS=13.627;HRun=0;HaplotypeScore=34.6525;MQ=91.53;MQ0=42;MQRankSum=-1.933;QD=5.73;ReadPosRankSum=-3.439;VQSLOD=0.7616;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:28,0:15:39.01:0,39,490	0/0:38,0:21:21.91:0,22,598	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	1/1:4,1:3:3.01:34,3,0	./.	./.	./.	1/1:2,2:2:6.02:94,6,0	./.	./.	./.	./.	./.	./.	./.
chr10	30353413	.	A	ATC	4974.93	PASS	AB=1.000;AC=47;AF=0.904;AN=52;BaseQRankSum=1.894;DP=431;FS=59.870;HRun=0;HaplotypeScore=229.2860;InbreedingCoeff=0.4693;MQ=42.34;MQ0=89;MQRankSum=-2.147;QD=14.98;ReadPosRankSum=3.322;VQSLOD=2.7943;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:8:12.01:136,12,0	1/1:7,0:6:15.03:173,15,0	0/0:42,0:10:29.68:0,30,306	0/0:37,0:6:10.51:0,11,78	1/1:22,0:19:35.74:382,36,0	1/1:18,0:13:24.25:224,24,0	1/1:7,0:6:9.48:103,9,0	1/1:30,1:22:60.09:722,60,0	1/1:10,0:9:22.27:217,22,0	0/1:13,0:9:13.32:255,0,13	1/1:7,0:6:6.72:149,7,0	1/1:18,0:9:14.78:139,15,0	1/1:10,0:10:29.43:294,29,0	1/1:13,0:11:29.90:284,30,0	1/1:12,0:10:6.29:113,6,0	1/1:12,0:10:19.15:163,19,0	1/1:15,0:9:0.09:199,0,0	1/1:14,0:6:7.83:77,8,0	1/1:18,1:12:23.96:319,24,0	1/1:12,0:9:10.77:102,11,0	./.	1/1:8,0:8:14.98:152,15,0	1/1:16,0:14:8.47:233,8,0	1/1:5,0:3:3.01:32,3,0	1/1:16,0:13:14.98:173,15,0	1/1:15,0:12:22.28:228,22,0	1/1:15,0:11:2.65:106,3,0	./.
chr10	30354220	.	TTGG	T	6129.67	PASS	AB=1.000;AC=42;AF=0.750;AN=56;BaseQRankSum=10.641;DP=787;FS=0.000;HRun=0;HaplotypeScore=127.6248;InbreedingCoeff=0.7680;MQ=60.11;MQ0=15;MQRankSum=1.060;QD=10.66;ReadPosRankSum=5.808;VQSLOD=4.2729;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:20,36:54:24.01:311,24,0	1/1:1,5:6:3:43,3,0	0/1:14,0:11:9.81:10,0,40	0/1:16,0:8:0.82:1,0,43	1/1:9,4:13:11.95:117,12,0	1/1:4,11:15:6.02:87,6,0	1/1:17,6:23:36.07:428,36,0	0/0:29,0:28:44.90:0,45,514	1/1:8,32:40:42.05:581,42,0	1/1:20,13:31:24.02:297,24,0	1/1:7,8:15:17.82:185,18,0	1/1:11,25:36:14.94:209,15,0	1/1:11,25:36:30:410,30,0	1/1:9,22:31:21.07:303,21,0	1/1:8,23:31:27.09:390,27,0	1/1:8,19:27:17.89:259,18,0	0/0:38,0:38:91.79:0,92,1436	0/0:23,0:23:23.28:0,23,905	0/0:25,0:24:45.88:0,46,570	0/0:17,0:16:21.01:0,21,301	0/0:80,0:79:99:0,138,1835	1/1:13,12:25:14.83:169,15,0	1/1:9,11:20:12.04:173,12,0	1/1:9,42:51:61.13:1135,61,0	1/1:13,12:23:8.99:130,9,0	1/1:16,15:31:36.02:450,36,0	1/1:5,18:23:5.08:304,5,0	1/1:8,0:8:13.91:138,14,0
chr10	30354995	.	TTGGGAAAAAGAAAGAG	T	7457.59	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=11.809;DP=566;FS=1.691;HRun=0;HaplotypeScore=249.3701;InbreedingCoeff=0.9758;MQ=84.14;MQ0=0;MQRankSum=-8.875;QD=76.10;ReadPosRankSum=0.347;VQSLOD=4.5537;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:90.29:0,90,6404	0/0:8,0:8:24.08:0,24,1683	0/0:23,0:23:63.08:0,63,3018	0/0:19,0:19:32.45:0,32,1297	0/0:28,0:28:81.28:0,81,6211	0/0:24,0:24:69.24:0,69,4540	0/0:18,0:18:51.18:0,51,3377	1/1:16,15:31:45.13:1392,45,0	0/0:17,0:17:51.17:0,51,3357	0/0:39,0:38:99:0,105,7346	0/0:20,0:20:60.21:0,60,4286	0/0:16,0:16:45.15:0,45,3111	0/0:26,0:26:72.25:0,72,5141	0/0:16,0:16:45.15:0,45,3120	0/0:27,0:27:81.28:0,81,5816	0/0:17,0:17:51.16:0,51,3628	1/1:3,13:16:30.10:1408,30,0	1/1:1,6:7:18.06:761,18,0	1/1:4,9:13:27.08:1060,27,0	1/1:7,19:26:57.20:2556,57,0	1/1:3,2:5:6.02:282,6,0	0/0:19,0:19:57.20:0,57,4019	0/0:21,0:21:63.22:0,63,4330	0/0:17,0:17:51.18:0,51,3869	0/0:25,0:25:75.26:0,75,5239	0/0:22,0:22:63.22:0,63,4906	0/0:27,0:26:78.27:0,78,5845	0/0:9,0:9:27.09:0,27,2103
chr10	30359270	.	GCTT	G	1444.34	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=2.647;DP=425;FS=3.214;HRun=0;HaplotypeScore=102.4837;InbreedingCoeff=0.9576;MQ=80.54;MQ0=0;MQRankSum=-2.364;QD=22.22;ReadPosRankSum=1.583;VQSLOD=3.6293;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:45.15:0,45,924	0/0:10,0:10:24.08:0,24,508	0/0:18,0:18:51.04:0,51,916	0/0:15,0:15:31.05:0,31,660	0/0:14,0:14:33.01:0,33,571	0/0:12,0:12:21.02:0,21,400	0/0:14,0:14:39.12:0,39,752	1/1:6,7:13:15.05:224,15,0	0/0:14,0:14:27.09:0,27,570	0/0:18,0:18:39.13:0,39,780	0/0:11,0:11:27.09:0,27,527	0/0:16,0:16:36.12:0,36,761	0/0:22,0:22:57.20:0,57,1195	0/0:12,0:12:27.08:0,27,531	0/0:25,0:25:48.15:0,48,946	0/0:17,0:17:48.16:0,48,1014	1/1:4,8:12:21.07:291,21,0	1/1:2,5:7:9.03:137,9,0	1/1:2,9:11:27.08:390,27,0	1/1:0,10:10:30.10:455,30,0	1/1:5,7:12:9.03:128,9,0	0/0:16,0:16:42.14:0,42,861	0/0:12,0:12:27.09:0,27,553	0/0:16,0:16:33.11:0,33,663	0/0:20,0:20:42.14:0,42,809	0/0:17,0:17:51.18:0,51,1079	0/0:28,0:28:72.25:0,72,1507	0/0:8,0:8:9.03:0,9,173
chr10	30359298	.	C	CCAAGGACAAAATAA	31930.52	PASS	AB=0.710;AC=54;AF=0.964;AN=56;BaseQRankSum=1.562;DP=269;FS=60.483;HRun=0;HaplotypeScore=273.5918;InbreedingCoeff=-0.0555;MQ=69.40;MQ0=0;MQRankSum=-3.656;QD=118.70;ReadPosRankSum=2.766;VQSLOD=2.9425;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:15:42.14:1782,42,0	1/1:8,0:8:24.08:1132,24,0	0/1:4,1:9:34.88:805,0,35	0/1:5,0:7:57.25:298,0,57	1/1:10,0:10:27.06:1131,27,0	1/1:5,0:5:6.02:367,6,0	1/1:9,0:9:18.04:723,18,0	1/1:3,0:3:9.02:281,9,0	1/1:7,0:7:21.07:1221,21,0	1/1:10,0:10:24.07:1094,24,0	1/1:5,0:5:15.05:866,15,0	1/1:10,0:10:27.09:1198,27,0	1/1:15,0:15:45.10:2005,45,0	1/1:7,0:7:21.06:1042,21,0	1/1:15,0:15:42.13:1952,42,0	1/1:14,0:14:36.08:1355,36,0	1/1:9,0:9:20.66:1042,21,0	1/1:4,0:4:8.99:333,9,0	1/1:11,0:11:30.07:1396,30,0	1/1:10,0:10:30.07:1126,30,0	1/1:4,0:4:6.01:174,6,0	1/1:14,0:14:42.14:1636,42,0	1/1:6,0:6:15.05:889,15,0	1/1:9,0:9:21.07:650,21,0	1/1:14,0:14:42.09:1799,42,0	1/1:14,0:14:42.14:2207,42,0	1/1:23,0:23:66.23:3030,66,0	1/1:2,0:2:6.02:397,6,0
chr10	30362030	.	AG	A	2580.60	PASS	AB=0.600;AC=39;AF=0.696;AN=56;BaseQRankSum=0.049;DP=430;FS=1.788;HRun=12;HaplotypeScore=58.3641;InbreedingCoeff=0.7224;MQ=73.17;MQ0=2;MQRankSum=2.026;QD=8.43;ReadPosRankSum=5.015;VQSLOD=2.3363;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:13,9:23:16.66:122,17,0	1/1:3,4:9:12.82:81,13,0	0/0:21,0:17:5.11:0,5,132	0/0:22,0:16:1.07:0,1,48	1/1:1,6:7:14.57:99,15,0	0/1:8,12:24:14.12:131,0,14	1/1:8,7:15:15.81:136,16,0	0/0:13,0:13:8.92:0,9,64	1/1:6,9:16:17.91:139,18,0	1/1:3,7:10:13.96:99,14,0	1/1:4,10:14:19.42:114,19,0	1/1:2,15:17:29.85:228,30,0	1/1:7,9:16:17.86:132,18,0	1/1:8,11:19:20.89:162,21,0	1/1:13,6:21:21.05:219,21,0	1/1:6,13:19:23.88:186,24,0	0/0:6,0:16:5.47:0,5,28	0/0:3,0:14:8.52:0,9,43	0/0:12,1:15:6.49:0,6,181	0/0:8,0:8:5.99:0,6,49	0/0:8,0:13:14.79:0,15,118	1/1:4,4:8:5.97:46,6,0	1/1:4,6:11:8:52,8,0	1/1:9,17:27:42.89:311,43,0	1/1:8,6:16:13.08:100,13,0	1/1:1,8:9:20.85:153,21,0	1/1:6,6:13:13.99:99,14,0	1/1:2,8:12:22.44:154,22,0
chr10	30363521	.	A	AT	7402.01	PASS	AB=0.683;AC=36;AF=0.643;AN=56;BaseQRankSum=-9.021;DP=644;FS=3.784;HRun=12;HaplotypeScore=67.7027;InbreedingCoeff=0.5288;MQ=75.68;MQ0=0;MQRankSum=-1.178;QD=15.26;ReadPosRankSum=3.232;VQSLOD=5.9615;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,26:38:42.33:566,42,0	0/1:5,6:11:22.82:116,0,23	0/1:21,0:17:9.19:9,0,88	0/0:14,0:15:12.90:0,13,131	1/1:5,21:29:17.76:425,18,0	1/1:1,15:16:36.06:350,36,0	1/1:8,17:25:1.25:336,1,0	0/0:30,1:32:35.46:0,35,414	1/1:8,18:27:47.91:452,48,0	1/1:7,18:26:35.41:501,35,0	0/1:6,14:22:1.92:294,0,2	1/1:7,15:23:17.15:328,17,0	0/1:5,17:22:4.65:281,0,5	1/1:6,23:29:63.10:613,63,0	1/1:5,23:28:48.08:467,48,0	1/1:5,15:20:4.26:365,4,0	0/0:21,0:22:52.72:0,53,378	0/0:12,0:12:26.82:0,27,197	0/0:22,0:22:56.66:0,57,416	0/0:30,0:30:62.56:0,63,458	0/0:25,1:26:14.25:0,14,386	0/1:6,6:12:22.78:125,0,23	1/1:7,17:25:23:372,23,0	1/1:5,18:25:35.06:359,35,0	1/1:3,10:14:20.97:193,21,0	1/1:9,21:30:44.17:584,44,0	0/1:13,17:29:24.53:433,0,25	1/1:0,11:11:24.04:234,24,0
chr10	30364603	.	A	AGAT	31668.44	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-8.589;DP=656;FS=3.915;HRun=0;HaplotypeScore=84.1671;InbreedingCoeff=0.9840;MQ=92.59;MQ0=0;MQRankSum=-12.401;QD=53.40;ReadPosRankSum=7.056;VQSLOD=6.7561;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,22:25:60.20:1307,60,0	1/1:1,14:15:42.14:906,42,0	0/0:26,0:26:44.42:0,44,1058	0/0:37,0:37:99:0,108,1663	1/1:2,24:26:57.20:1282,57,0	1/1:5,20:25:63.21:1313,63,0	1/1:2,21:24:54.19:1206,54,0	1/1:6,24:31:84.27:1830,84,0	1/1:2,16:18:42.14:916,42,0	1/1:1,22:25:72.19:1540,72,0	1/1:1,21:22:57.20:1260,57,0	1/1:2,25:27:72.25:1617,72,0	1/1:3,23:26:60.20:1298,60,0	1/1:4,20:24:63.22:1390,63,0	1/1:2,27:31:69.24:1554,69,0	1/1:1,18:19:48.16:1084,48,0	1/1:3,30:35:75.26:1693,75,0	1/1:3,19:22:54.19:1222,54,0	1/1:5,14:19:57.19:1235,57,0	1/1:2,21:23:63.22:1412,63,0	1/1:2,16:18:45.15:973,45,0	1/1:4,16:21:54.18:1071,54,0	1/1:2,18:22:42.14:950,42,0	1/1:3,16:18:30.10:665,30,0	1/1:2,18:20:48.16:1085,48,0	1/1:4,17:21:54.14:1092,54,0	1/1:0,27:28:66.23:1495,66,0	1/1:1,6:7:12.04:271,12,0
chr10	30365615	.	T	TC	13321.95	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-0.286;DP=575;FS=32.577;HRun=7;HaplotypeScore=196.1235;InbreedingCoeff=0.9403;MQ=80.27;MQ0=0;MQRankSum=-8.951;QD=25.77;ReadPosRankSum=3.696;VQSLOD=1.7448;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:12,21:32:60.06:664,60,0	1/1:1,11:12:33.07:378,33,0	0/0:27,0:27:12.45:0,12,303	0/0:27,1:26:12.78:0,13,310	1/1:5,18:23:38.89:443,39,0	1/1:1,13:14:36.10:424,36,0	1/1:2,18:20:54.10:622,54,0	1/1:8,17:25:60.12:678,60,0	1/1:4,11:15:39.08:454,39,0	1/1:5,18:23:57.17:679,57,0	1/1:11,20:31:42.02:453,42,0	1/1:7,15:22:52.65:583,53,0	1/1:4,13:17:36.11:435,36,0	1/1:5,13:18:36.07:415,36,0	1/1:5,18:23:66.06:728,66,0	1/1:5,15:20:45.10:527,45,0	1/1:1,19:20:48.01:556,48,0	1/1:3,10:13:39.11:459,39,0	1/1:6,15:21:48.14:569,48,0	1/1:10,14:24:45.39:512,45,0	1/1:4,2:7:8.89:87,9,0	1/1:5,17:22:54.10:615,54,0	1/1:6,16:22:39.53:433,40,0	1/1:6,11:17:32.99:344,33,0	1/1:5,20:25:60.17:712,60,0	1/1:5,16:21:54.16:642,54,0	1/1:2,17:19:51.15:610,51,0	1/1:3,6:9:27.05:301,27,0
chr10	30365652	.	C	CT	18904.76	PASS	AB=0.842;AC=55;AF=0.982;AN=56;BaseQRankSum=-2.428;DP=519;FS=0.000;HRun=2;HaplotypeScore=149.4920;InbreedingCoeff=-0.0185;MQ=74.52;MQ0=0;MQRankSum=-2.340;QD=36.43;ReadPosRankSum=1.676;VQSLOD=4.3278;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,32:34:93.31:1337,93,0	1/1:0,7:7:18.06:259,18,0	1/1:10,15:23:48.13:665,48,0	0/1:13,3:15:27.01:259,0,27	1/1:3,22:25:57.15:795,57,0	1/1:0,12:12:36.12:518,36,0	1/1:4,16:20:48.16:691,48,0	1/1:3,11:14:33.10:457,33,0	1/1:4,10:14:33.09:455,33,0	1/1:1,22:23:66.22:950,66,0	1/1:3,26:29:75.25:1079,75,0	1/1:0,25:25:72.24:1034,72,0	1/1:1,12:13:36.12:518,36,0	1/1:1,10:11:30.10:431,30,0	1/1:0,25:25:69.23:992,69,0	1/1:2,11:13:33.11:475,33,0	1/1:2,27:28:75.24:1061,75,0	1/1:1,18:19:48.16:691,48,0	1/1:1,23:24:69.22:975,69,0	1/1:0,17:17:48.08:644,48,0	1/1:0,10:10:30.10:432,30,0	1/1:3,14:17:42.14:603,42,0	1/1:0,10:10:30.06:408,30,0	1/1:1,15:16:39.13:547,39,0	1/1:5,12:17:36.12:518,36,0	1/1:2,23:25:69.23:992,69,0	1/1:2,14:16:42.14:604,42,0	1/1:0,12:12:36.12:518,36,0
chr10	30366625	.	CTCTA	C	3815.35	PASS	AB=0.922;AC=27;AF=0.519;AN=52;BaseQRankSum=0.255;DP=1177;FS=17.423;HRun=0;HaplotypeScore=307.2830;InbreedingCoeff=-0.0191;MQ=60.22;MQ0=5;MQRankSum=0.147;QD=5.14;ReadPosRankSum=-1.568;VQSLOD=0.9881;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:32,3:35:21.07:311,21,0	0/0:19,0:19:27.05:0,27,471	./.	./.	1/1:28,3:31:7.62:219,8,0	0/1:39,0:42:35.32:35,0,73	0/1:28,0:28:11.98:38,0,12	0/0:163,0:158:2.49:0,2,6	1/1:23,0:23:3.76:32,4,0	0/0:49,0:49:33.97:0,34,523	0/0:38,0:38:21.06:0,21,359	0/1:19,0:23:99:104,0,105	0/1:46,0:50:86.01:86,0,98	0/1:21,0:23:3.25:84,0,3	0/1:43,8:51:39.34:454,0,39	1/1:51,10:61:44.41:721,44,0	0/1:38,0:37:2.51:3,0,309	0/1:41,5:45:29.94:251,0,30	0/0:41,0:38:9.48:0,9,114	0/0:90,0:89:28.66:0,29,686	0/1:25,1:25:33.72:34,0,152	0/1:33,0:35:28.03:28,0,38	0/1:35,0:39:57.29:57,0,107	0/1:18,0:20:25.69:26,0,30	0/1:33,0:39:48.85:92,0,49	1/1:34,4:38:28.32:375,28,0	1/1:51,6:57:33.11:494,33,0	1/1:35,2:37:10.05:373,10,0
chr10	30367231	.	CTTAATAGATGCCA	C	8082.19	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=12.775;DP=710;FS=17.483;HRun=0;HaplotypeScore=284.4535;InbreedingCoeff=0.9959;MQ=85.47;MQ0=0;MQRankSum=-11.703;QD=71.52;ReadPosRankSum=-1.483;VQSLOD=3.2395;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,120,7369	0/0:11,0:11:33.11:0,33,2190	0/0:27,0:27:78.27:0,78,4488	0/0:22,0:22:60.21:0,60,3049	0/0:27,0:27:78.25:0,78,4997	0/0:18,0:18:51.18:0,51,3047	0/0:32,0:32:90.29:0,90,5013	1/1:8,20:28:60.18:2068,60,0	0/0:29,0:29:87.30:0,87,5322	0/0:37,0:37:99:0,105,6745	0/0:19,0:19:57.20:0,57,3451	0/0:34,0:34:99:0,102,6610	0/0:27,0:27:81.28:0,81,5117	0/0:42,0:42:99:0,126,7655	0/0:42,0:41:99:0,126,7497	0/0:36,0:36:99:0,104,6537	1/1:4,12:16:27.09:1019,27,0	1/1:2,11:13:24.08:922,24,0	1/1:6,9:15:27.09:940,27,0	1/1:3,23:26:69.71:2669,70,0	1/1:6,9:15:15.05:464,15,0	0/0:24,0:24:72.25:0,72,4714	0/0:18,0:18:54.19:0,54,3252	0/0:14,0:14:42.14:0,42,2548	0/0:26,0:26:78.27:0,78,4989	0/0:25,0:25:72.25:0,72,4008	0/0:28,0:28:78.27:0,78,4946	0/0:19,0:19:57.20:0,57,3528
chr10	30368809	.	GACAA	G	5925.05	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=13.430;DP=627;FS=7.794;HRun=0;HaplotypeScore=103.8002;InbreedingCoeff=0.9960;MQ=81.42;MQ0=0;MQRankSum=-5.049;QD=48.17;ReadPosRankSum=-0.254;VQSLOD=5.1506;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:60.18:0,60,1543	0/0:10,0:10:27.09:0,27,719	0/0:23,0:23:65.59:0,66,1611	0/0:18,0:18:30.81:0,31,958	0/0:28,0:28:75.24:0,75,1945	0/0:25,0:25:72.25:0,72,1918	0/0:23,0:23:63.22:0,63,1681	1/1:3,28:31:84.29:1557,84,0	0/0:17,0:17:51.18:0,51,1352	0/0:30,0:30:87.30:0,87,2262	0/0:19,0:19:57.20:0,57,1489	0/0:24,0:24:66.23:0,66,1760	0/0:26,0:26:78.26:0,78,1982	0/0:11,0:11:33.11:0,33,880	0/0:30,0:30:87.30:0,87,2321	0/0:33,0:33:96.33:0,96,2562	1/1:2,19:21:54.19:1008,54,0	1/1:1,8:9:18.06:336,18,0	1/1:1,17:18:51.15:897,51,0	1/1:2,27:29:78.27:1455,78,0	1/1:1,14:15:36.12:672,36,0	0/0:23,0:23:69.24:0,69,1839	0/0:37,0:37:99:0,99,2640	0/0:8,0:8:24.08:0,24,641	0/0:34,0:34:99:0,102,2722	0/0:24,0:24:66.22:0,66,1700	0/0:34,0:34:96.33:0,96,2546	0/0:6,0:6:18.06:0,18,480
chr10	30369710	.	GTC	G	1350.86	PASS	AB=0.750;AC=11;AF=0.196;AN=56;BaseQRankSum=-1.307;DP=616;FS=5.461;HRun=0;HaplotypeScore=165.9456;InbreedingCoeff=0.8154;MQ=62.72;MQ0=4;MQRankSum=0.331;QD=15.35;ReadPosRankSum=-2.239;VQSLOD=3.1216;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:46.36:0,46,600	0/0:12,0:12:24.61:0,25,235	0/0:31,0:24:41.62:0,42,642	0/0:37,0:22:26.30:0,26,385	0/0:37,0:37:49.65:0,50,501	0/0:18,0:18:17.05:0,17,214	0/0:24,0:24:45.90:0,46,483	1/1:8,20:28:26.47:696,26,0	0/0:16,0:16:20.94:0,21,231	0/0:32,0:32:83.52:0,84,785	0/0:19,0:19:24.88:0,25,333	0/0:18,0:18:22.32:0,22,264	0/0:21,0:21:38.26:0,38,368	0/0:14,0:14:25.93:0,26,317	0/0:25,0:25:34.31:0,34,405	0/0:20,0:20:22.74:0,23,242	1/1:4,3:7:6.02:75,6,0	0/1:6,3:9:22.29:63,0,22	1/1:6,6:12:5.43:159,5,0	1/1:15,11:25:28.97:374,29,0	1/1:1,5:6:12.04:150,12,0	0/0:30,0:30:54.86:0,55,635	0/0:31,0:31:41.36:0,41,486	0/0:9,0:9:11.96:0,12,130	0/0:33,0:33:54.80:0,55,601	0/0:29,0:29:64.96:0,65,676	0/0:25,0:24:42.72:0,43,407	0/0:15,0:15:40.62:0,41,349
chr10	30369741	.	C	CCA	138.35	PASS	AB=0.898;AC=8;AF=0.143;AN=56;BaseQRankSum=3.301;DP=450;FS=13.004;HRun=0;HaplotypeScore=140.6466;InbreedingCoeff=-0.1962;MQ=49.29;MQ0=4;MQRankSum=-3.581;QD=0.92;ReadPosRankSum=0.715;VQSLOD=1.5438;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,1:21:22.32:0,22,309	0/1:9,1:10:14.20:14,0,178	0/0:20,0:9:16.27:0,16,187	0/1:32,0:15:21.70:22,0,92	0/1:25,1:26:12.69:13,0,180	0/0:6,0:6:15.05:0,15,228	0/0:12,3:15:15.63:0,16,360	0/0:20,0:20:51.15:0,51,718	0/0:12,1:13:5.80:0,6,244	0/1:17,2:19:52.20:52,0,508	0/1:8,4:12:9.45:9,0,81	0/0:18,1:19:30.10:0,30,436	0/0:13,2:15:5.92:0,6,194	0/0:9,1:10:12.14:0,12,139	0/0:17,2:19:29.96:0,30,378	0/0:13,0:13:23.92:0,24,309	0/0:7,0:7:12:0,12,157	0/0:7,0:7:10.49:0,10,80	0/0:5,0:5:9.02:0,9,116	0/0:23,1:24:15.47:0,15,163	0/0:3,0:3:6.02:0,6,85	0/0:18,4:22:13.47:0,13,310	0/0:24,1:25:21.48:0,21,298	0/0:5,0:5:3.48:0,3,45	0/0:26,5:31:15.93:0,16,480	0/1:16,3:19:99:112,0,499	0/1:18,3:21:33.59:34,0,351	0/1:10,1:11:13.53:14,0,198
chr10	30372433	.	C	CA	21126.40	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=6.100;DP=765;FS=3.872;HRun=2;HaplotypeScore=178.3698;InbreedingCoeff=0.9948;MQ=85.55;MQ0=0;MQRankSum=-4.974;QD=39.05;ReadPosRankSum=5.160;VQSLOD=4.0383;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,27:27:75.25:1080,75,0	1/1:0,13:13:36.12:519,36,0	0/0:22,0:22:60.17:0,60,731	0/0:28,0:28:60.04:0,60,851	1/1:1,26:27:78.26:1123,78,0	1/1:2,40:42:99:1555,108,0	1/1:1,31:32:93.31:1339,93,0	0/0:27,0:27:75.23:0,75,919	1/1:2,24:26:72.21:1015,72,0	1/1:0,35:35:99:1510,105,0	1/1:0,24:24:72.24:1037,72,0	1/1:1,35:36:99:1426,99,0	1/1:0,28:28:78.26:1122,78,0	1/1:3,29:32:81.27:1166,81,0	1/1:3,22:25:48.16:691,48,0	1/1:2,27:29:78.26:1123,78,0	0/0:28,0:28:81.25:0,81,1003	0/0:27,0:27:81.25:0,81,1004	0/0:18,0:18:48.15:0,48,595	0/0:44,0:44:99:0,132,1622	0/0:30,0:30:84.26:0,84,1041	1/1:2,29:31:87.29:1253,87,0	1/1:1,22:23:60.16:841,60,0	1/1:0,29:29:84.28:1210,84,0	1/1:2,26:28:75.25:1080,75,0	1/1:2,21:23:66.20:913,66,0	1/1:4,23:27:66.22:950,66,0	1/1:0,4:4:12.04:173,12,0
chr10	30373177	.	T	TA	16846.31	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-5.827;DP=585;FS=28.361;HRun=7;HaplotypeScore=53.9319;InbreedingCoeff=0.9948;MQ=79.86;MQ0=0;MQRankSum=-8.894;QD=30.91;ReadPosRankSum=5.035;VQSLOD=2.9815;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,21:21:54.17:652,54,0	1/1:0,8:8:21.06:254,21,0	0/0:25,0:25:54.02:0,54,509	0/0:15,0:15:29.60:0,30,288	1/1:5,28:33:81.25:978,81,0	1/1:2,19:21:60.15:709,60,0	1/1:1,19:20:57.17:688,57,0	1/1:2,16:18:48.15:580,48,0	1/1:3,20:23:54.17:651,54,0	1/1:2,19:21:60.18:721,60,0	1/1:2,22:24:60.18:725,60,0	1/1:4,20:24:57.17:688,57,0	1/1:3,18:21:57.17:687,57,0	1/1:2,9:11:21.06:254,21,0	1/1:2,22:24:66.20:797,66,0	1/1:1,19:20:57.17:687,57,0	1/1:2,23:25:69.21:833,69,0	1/1:1,9:10:27.08:326,27,0	1/1:3,14:17:42.12:496,42,0	1/1:2,22:24:66.17:782,66,0	1/1:2,12:14:36.11:435,36,0	1/1:3,27:30:72.18:853,72,0	1/1:3,27:31:75.23:903,75,0	1/1:0,19:19:48.15:579,48,0	1/1:0,12:12:33.10:399,33,0	1/1:11,18:29:57.17:683,57,0	1/1:3,29:32:84.26:1014,84,0	1/1:0,13:13:39.12:471,39,0
chr10	30373501	.	G	GA	14089.77	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-4.737;DP=606;FS=1.831;HRun=0;HaplotypeScore=109.9105;InbreedingCoeff=0.9817;MQ=84.20;MQ0=0;MQRankSum=-7.678;QD=25.48;ReadPosRankSum=9.536;VQSLOD=4.9354;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,13:20:47.38:543,47,0	1/1:2,8:10:23.81:287,24,0	0/0:31,0:30:59.19:0,59,905	0/0:22,0:19:50.03:0,50,644	1/1:1,30:31:83.72:1006,84,0	1/1:2,30:32:68.68:824,69,0	1/1:0,19:19:45.14:544,45,0	1/1:5,2:25:51.53:266,52,0	1/1:5,21:26:60.11:699,60,0	1/1:5,22:27:64.47:750,64,0	1/1:6,21:28:59.98:626,60,0	1/1:1,20:21:51.13:596,51,0	1/1:2,18:20:47.98:552,48,0	1/1:2,16:18:41.86:501,42,0	1/1:2,22:24:53.45:646,53,0	1/1:4,19:23:54.96:680,55,0	1/1:1,1:15:29.78:129,30,0	1/1:2,0:14:31.96:142,32,0	1/1:1,1:11:28.49:169,28,0	1/1:3,0:16:30.10:142,30,0	1/1:1,1:9:13.93:68,14,0	1/1:2,18:20:54.15:633,54,0	1/1:10,24:35:81.64:987,82,0	1/1:2,13:15:30.24:393,30,0	1/1:0,19:19:48.15:572,48,0	1/1:6,21:27:69.36:864,69,0	1/1:0,36:36:93.04:1118,93,0	1/1:2,10:12:16.73:350,17,0
chr10	30374734	.	GA	G	5877.12	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=14.808;DP=727;FS=18.872;HRun=2;HaplotypeScore=77.2977;InbreedingCoeff=1.0000;MQ=83.42;MQ0=0;MQRankSum=-1.891;QD=36.28;ReadPosRankSum=-1.166;VQSLOD=2.7822;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,108,1555	0/0:12,0:12:36.12:0,36,540	0/0:22,0:22:60.20:0,60,887	0/0:22,0:22:57.16:0,57,815	0/0:32,0:32:90.30:0,90,1349	0/0:27,0:27:81.26:0,81,1191	0/0:23,0:23:69.23:0,69,1032	1/1:0,24:24:72.21:904,72,0	0/0:27,0:27:81.27:0,81,1197	0/0:30,0:30:87.29:0,87,1303	0/0:17,0:17:48.16:0,48,718	0/0:25,0:25:75.25:0,75,1106	0/0:31,0:31:90.30:0,90,1348	0/0:24,0:24:72.24:0,72,1079	0/0:33,0:33:99:0,99,1484	0/0:34,0:34:99:0,102,1510	1/1:1,27:28:72.23:935,72,0	1/1:1,20:21:60.19:779,60,0	1/1:1,23:24:69.22:883,69,0	1/1:0,37:37:99:1363,105,0	1/1:0,28:28:78.25:1013,78,0	0/0:23,0:23:66.20:0,66,951	0/0:21,0:21:60.17:0,60,871	0/0:21,0:21:63.21:0,63,943	0/0:30,0:30:90.26:0,90,1274	0/0:26,0:26:75.25:0,75,1104	0/0:31,0:31:90.30:0,90,1347	0/0:17,0:17:51.17:0,51,761
chr10	30377738	.	AAC	A	354.92	PASS	AB=0.925;AC=19;AF=0.396;AN=48;BaseQRankSum=6.066;DP=571;FS=14.489;HRun=0;HaplotypeScore=76.6831;InbreedingCoeff=-0.0873;MQ=73.09;MQ0=15;MQRankSum=0.361;QD=1.18;ReadPosRankSum=2.423;VQSLOD=0.5033;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:26:2.97:20,3,0	0/1:13,1:14:20.19:20,0,120	./.	./.	0/1:12,5:17:49.46:49,0,76	0/0:18,0:17:18:0,18,211	0/0:20,0:21:15.49:0,15,180	0/1:27,0:27:0:0,0,0	0/0:21,0:21:24.08:0,24,345	0/0:22,0:21:20.99:0,21,253	0/1:11,0:11:35.27:43,0,35	0/0:30,0:31:7.40:0,7,212	0/1:19,2:21:59.58:60,0,133	0/0:8,0:7:2.99:0,3,24	0/1:22,3:24:43.47:43,0,155	0/1:28,2:31:36.48:36,0,400	1/1:10,0:11:5.68:28,6,0	0/0:9,0:8:1.25:0,1,3	1/1:9,0:11:2.84:14,3,0	1/1:7,0:9:8.58:44,9,0	./.	0/1:25,3:28:11.60:12,0,206	0/0:15,0:15:14.80:0,15,149	0/0:25,2:27:0.82:0,1,357	0/1:29,1:31:59.26:59,0,315	0/1:17,0:17:36.78:37,0,77	0/1:18,1:19:31.31:31,0,118	./.
chr10	30378512	.	T	TA	4870.41	PASS	AC=38;AF=0.704;AN=54;BaseQRankSum=2.566;DP=270;FS=4.981;HRun=7;HaplotypeScore=36.3682;InbreedingCoeff=0.7851;MQ=71.77;MQ0=0;MQRankSum=0.219;QD=27.52;ReadPosRankSum=5.401;VQSLOD=4.6951;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,17:19:48.06:560,48,0	1/1:1,1:2:3.01:36,3,0	0/0:3,0:3:2.44:0,2,6	0/0:4,0:4:5.80:0,6,39	1/1:1,11:12:33.10:399,33,0	1/1:2,15:17:42.13:507,42,0	1/1:2,0:2:5.99:47,6,0	0/0:31,0:31:81.07:0,81,760	1/1:0,5:5:12.04:145,12,0	1/1:0,3:3:9.03:109,9,0	1/1:2,5:7:12.04:145,12,0	1/1:0,6:6:15.05:181,15,0	1/1:1,10:11:24.07:290,24,0	1/1:1,5:6:12.04:145,12,0	1/1:2,8:10:21.06:254,21,0	1/1:0,6:6:15.05:181,15,0	0/0:17,0:17:45.07:0,45,434	0/0:9,0:9:27.04:0,27,261	0/0:20,0:20:51.04:0,51,482	0/0:6,0:6:15.02:0,15,145	0/0:2,0:2:3:0,3,29	1/1:3,1:4:3.01:36,3,0	1/1:0,2:2:3.01:36,3,0	./.	1/1:1,23:24:48.15:580,48,0	1/1:3,8:11:24.05:276,24,0	1/1:1,15:16:36.11:435,36,0	1/1:0,14:14:42.13:507,42,0
chr10	30378819	.	CTG	C	20168.85	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=12.445;DP=717;FS=13.146;HRun=0;HaplotypeScore=94.3335;InbreedingCoeff=0.9998;MQ=78.06;MQ0=8;MQRankSum=-5.041;QD=38.20;ReadPosRankSum=5.685;VQSLOD=6.3086;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,49:50:99:1934,135,0	1/1:0,9:9:27.09:387,27,0	0/0:24,0:23:54.18:0,54,894	0/0:18,0:18:38.76:0,39,599	1/1:0,17:16:39.13:559,39,0	1/1:2,25:26:60.20:860,60,0	1/1:2,25:27:66.22:946,66,0	0/0:31,0:31:87.30:0,87,1593	1/1:0,25:25:69.23:989,69,0	1/1:0,26:26:78.25:1099,78,0	1/1:0,18:18:54.18:774,54,0	1/1:2,24:26:57.17:817,57,0	1/1:0,27:25:75.25:1075,75,0	1/1:0,31:30:90.30:1288,90,0	1/1:2,42:44:99:1548,108,0	1/1:1,38:39:99:1505,105,0	0/0:26,0:26:69.24:0,69,1265	0/0:19,0:17:51.17:0,51,920	0/0:20,0:20:54.66:0,55,971	0/0:14,0:14:42.14:0,42,764	0/0:37,0:37:99:0,111,1995	1/1:0,20:20:57.19:817,57,0	1/1:0,13:13:33.11:473,33,0	1/1:1,22:23:63.21:903,63,0	1/1:2,31:33:93.31:1332,93,0	1/1:1,25:26:75.25:1072,75,0	1/1:1,25:26:72.24:1019,72,0	1/1:0,20:20:54.18:774,54,0
chr10	30380277	.	G	GA	2449.36	PASS	AB=0.794;AC=15;AF=0.268;AN=56;BaseQRankSum=-7.865;DP=643;FS=1.778;HRun=11;HaplotypeScore=86.9476;InbreedingCoeff=0.6056;MQ=73.28;MQ0=1;MQRankSum=-0.814;QD=11.24;ReadPosRankSum=-1.279;VQSLOD=3.1758;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:39:91.44:0,91,681	0/0:10,0:10:28.71:0,29,214	0/0:18,1:19:0.74:0,1,132	0/0:11,0:9:2.97:0,3,23	0/0:23,0:23:3.12:0,3,339	0/0:15,1:16:2.35:0,2,194	0/0:18,0:18:8.48:0,8,246	1/1:14,20:33:27.84:404,28,0	0/0:16,0:17:46.84:0,47,352	0/1:22,2:24:13:13,0,277	0/0:16,1:19:7.41:0,7,231	0/0:24,0:25:55.82:0,56,423	0/0:26,2:28:7.79:0,8,424	0/0:19,0:20:49.79:0,50,371	0/1:23,4:27:11.09:11,0,279	0/0:36,0:35:92.59:0,93,714	1/1:3,17:21:19.44:330,19,0	1/1:6,11:18:32.90:319,33,0	1/1:11,11:24:44.58:403,45,0	1/1:5,17:25:53.43:443,53,0	0/1:6,12:20:7.46:264,0,7	0/0:19,0:20:40.86:0,41,307	0/0:14,0:15:40.89:0,41,308	0/0:20,0:22:60.84:0,61,450	1/1:4,20:25:27.70:448,28,0	0/0:34,1:37:47.10:0,47,532	0/0:32,1:32:53.23:0,53,596	0/0:17,0:17:20.86:0,21,162
chr10	30382059	.	A	AT	3920.34	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=-13.268;DP=631;FS=24.056;HRun=7;HaplotypeScore=60.6642;InbreedingCoeff=0.9180;MQ=72.74;MQ0=0;MQRankSum=-0.232;QD=27.04;ReadPosRankSum=0.367;VQSLOD=1.8987;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:41.89:0,42,386	0/0:15,0:15:45.04:0,45,427	0/0:14,0:14:9.10:0,9,152	0/1:14,0:13:3.64:4,0,99	0/0:40,0:40:99:0,99,956	0/0:33,0:33:93.11:0,93,886	0/0:23,0:23:60:0,60,548	1/1:4,29:33:84.23:992,84,0	0/0:17,0:17:45.07:0,45,434	0/0:28,0:28:72.11:0,72,695	0/0:20,0:20:51.07:0,51,489	0/0:21,0:21:60.09:0,60,579	0/0:22,0:22:66.10:0,66,633	0/0:23,0:23:60.07:0,60,572	0/0:31,0:31:87.10:0,87,824	0/0:27,0:27:78.11:0,78,747	1/1:3,21:24:60.18:725,60,0	1/1:1,13:14:36.08:419,36,0	1/1:4,19:23:54.15:639,54,0	1/1:2,22:24:66.15:780,66,0	1/1:1,12:13:30.09:362,30,0	0/0:26,0:26:75.10:0,75,719	0/0:17,0:17:51.07:0,51,488	0/0:17,0:17:51.05:0,51,481	0/0:29,0:29:81.10:0,81,773	0/0:29,0:29:78.10:0,78,745	0/0:27,0:27:72.10:0,72,689	0/0:12,0:12:30.05:0,30,290
chr10	30382944	.	CG	C	1942.92	PASS	AB=0.938;AC=18;AF=0.321;AN=56;BaseQRankSum=6.881;DP=444;FS=2.319;HRun=11;HaplotypeScore=78.2912;InbreedingCoeff=0.4392;MQ=70.27;MQ0=3;MQRankSum=-1.156;QD=9.48;ReadPosRankSum=3.197;VQSLOD=3.0610;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:23.74:0,24,231	0/0:4,0:5:5.85:0,6,46	0/0:20,0:16:28.39:0,28,260	0/0:20,0:16:15:0,15,136	0/0:13,0:13:12.02:0,12,120	0/1:11,2:13:31.22:31,0,110	0/0:15,0:15:13.23:0,13,294	1/1:6,11:17:27.41:219,27,0	0/0:14,1:15:27.03:0,27,263	0/1:12,1:13:12.14:12,0,84	0/0:14,0:14:15.02:0,15,152	0/1:21,3:24:43.90:44,0,166	0/1:17,0:17:8.52:9,0,189	0/1:17,0:17:11.46:11,0,112	0/0:16,1:17:5.66:0,6,240	0/0:18,1:19:11.40:0,11,299	1/1:1,27:28:77.91:640,78,0	1/1:0,13:13:38.95:320,39,0	1/1:9,13:22:44.92:365,45,0	1/1:6,10:16:32.95:271,33,0	1/1:3,7:10:23.95:195,24,0	0/0:2,0:3:2.97:0,3,20	0/0:9,0:9:6:0,6,56	0/0:11,0:11:11.96:0,12,113	0/0:12,0:12:12.01:0,12,119	0/1:13,1:14:15.61:16,0,47	0/0:28,0:27:39.04:0,39,381	0/0:10,0:10:24.02:0,24,239
chr10	30388777	.	G	GGTAATCCAAA	79222.96	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=1.191;DP=672;FS=11.402;HRun=0;HaplotypeScore=234.7306;InbreedingCoeff=0.9895;MQ=65.59;MQ0=0;MQRankSum=-11.734;QD=127.78;ReadPosRankSum=5.503;VQSLOD=4.3532;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:14,14:28:78.22:3343,78,0	1/1:5,5:11:27.09:1356,27,0	0/0:31,0:31:87.28:0,87,2660	0/0:21,0:21:63.21:0,63,1924	1/1:4,24:28:81.28:4127,81,0	1/1:7,10:17:51.13:2259,51,0	1/1:11,14:25:75.26:3544,75,0	1/1:32,8:42:99:4643,114,0	1/1:6,14:21:63.22:3148,63,0	1/1:8,29:42:99:5906,120,0	1/1:10,7:19:48.16:1925,48,0	1/1:13,16:31:84.25:3947,84,0	1/1:9,16:25:75.26:3679,75,0	1/1:8,12:22:60.21:2874,60,0	1/1:8,14:23:66.23:3054,66,0	1/1:10,22:34:93.32:4438,93,0	1/1:4,5:9:24.08:1096,24,0	1/1:6,5:11:28.34:1384,28,0	1/1:9,4:13:39.09:1595,39,0	1/1:6,22:31:90.20:4218,90,0	1/1:11,5:18:33.07:1049,33,0	1/1:8,22:32:84.29:4273,84,0	1/1:7,17:25:72.13:3019,72,0	1/1:10,4:15:30.07:1255,30,0	1/1:8,27:36:99:4913,102,0	1/1:14,10:26:72.25:3370,72,0	1/1:10,19:29:84.29:4116,84,0	1/1:2,3:5:15.05:691,15,0
chr10	30388895	.	AAC	A	485.74	PASS	AB=0.847;AC=20;AF=0.769;AN=26;BaseQRankSum=1.741;DP=488;FS=2.782;HRun=0;HaplotypeScore=83.8097;InbreedingCoeff=0.0305;MQ=60.07;MQ0=5;MQRankSum=0.320;QD=2.48;ReadPosRankSum=0.533;VQSLOD=1.3124;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:2.47:0,2,21	./.	./.	./.	1/1:17,1:19:8.85:77,9,0	1/1:14,5:19:3:32,3,0	1/1:14,1:15:3.01:32,3,0	./.	./.	./.	./.	1/1:21,1:22:5.97:52,6,0	0/1:14,3:18:10.05:94,0,10	1/1:14,1:15:3:32,3,0	0/1:24,3:28:28.87:94,0,29	1/1:20,6:24:8.71:95,9,0	1/1:10,0:10:2.84:14,3,0	./.	./.	./.	./.	1/1:8,2:10:3.01:32,3,0	1/1:13,0:13:2.99:26,3,0	./.	./.	0/0:16,0:16:0.89:0,1,2	./.	./.
chr10	30390506	.	T	TA	11096.02	PASS	AB=0.950;AC=41;AF=0.732;AN=56;BaseQRankSum=-12.440;DP=541;FS=2.923;HRun=8;HaplotypeScore=49.9386;InbreedingCoeff=0.9449;MQ=79.04;MQ0=0;MQRankSum=-3.240;QD=26.48;ReadPosRankSum=5.335;VQSLOD=5.1327;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,17:18:45.13:519,45,0	1/1:1,6:7:15.04:173,15,0	0/1:18,0:18:1.26:1,0,211	0/0:15,0:13:22.38:0,22,203	1/1:2,23:25:60.09:662,60,0	1/1:2,15:17:45.13:519,45,0	1/1:1,18:19:48.14:554,48,0	0/0:32,0:32:77.86:0,78,710	1/1:2,20:22:54.16:623,54,0	1/1:5,25:30:75.22:866,75,0	1/1:2,24:26:69.21:796,69,0	1/1:0,17:17:45.13:519,45,0	1/1:1,11:12:27.08:312,27,0	1/1:0,19:19:54.16:623,54,0	1/1:4,19:23:54.15:616,54,0	1/1:3,17:20:48.14:554,48,0	0/0:16,0:16:44.93:0,45,405	0/0:9,0:9:24.01:0,24,220	0/0:21,0:21:57.02:0,57,518	0/0:15,0:15:42:0,42,376	0/0:14,0:14:35.99:0,36,319	1/1:1,17:18:48.14:554,48,0	1/1:5,17:22:45.13:519,45,0	1/1:2,14:16:33.10:381,33,0	1/1:2,25:27:57.17:658,57,0	1/1:4,18:22:51.14:577,51,0	1/1:3,24:27:63.18:722,63,0	1/1:1,12:13:30.09:346,30,0
chr10	30393524	.	CTT	C	4562.13	PASS	AB=0.967;AC=23;AF=0.411;AN=56;BaseQRankSum=-4.387;DP=564;FS=2.931;HRun=3;HaplotypeScore=91.3226;InbreedingCoeff=-0.2815;MQ=66.93;MQ0=12;MQRankSum=3.834;QD=12.50;ReadPosRankSum=4.534;VQSLOD=2.0250;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:30:9.40:387,0,9	0/1:10,0:10:15.13:123,0,15	0/0:31,0:22:49.27:0,49,536	0/0:28,0:21:46.21:0,46,507	0/1:11,0:12:63.67:140,0,64	1/1:16,0:16:2.58:224,3,0	0/1:17,1:18:15.31:281,0,15	0/0:23,0:21:56.23:0,56,510	0/1:21,0:19:12.54:273,0,13	0/1:22,0:22:95.80:252,0,96	0/1:8,0:8:44.62:79,0,45	0/1:26,0:27:30.54:305,0,31	0/1:16,0:15:27.32:210,0,27	0/1:12,1:13:29.90:161,0,30	0/1:18,4:22:17.91:411,0,18	1/1:27,1:28:15.79:509,16,0	0/0:25,0:25:56.28:0,56,409	0/0:26,0:26:47.78:0,48,370	0/0:19,0:19:48.18:0,48,368	0/0:20,0:20:37.29:0,37,268	0/0:27,0:26:58.72:0,59,482	0/1:16,0:16:17.82:18,0,153	0/1:14,0:15:57.90:144,0,58	0/1:26,1:28:33.56:415,0,34	0/1:18,0:17:21.20:94,0,21	0/1:9,0:9:17.54:68,0,18	0/1:25,0:26:26.99:351,0,27	1/1:10,0:10:6.37:118,6,0
chr10	30393526	.	TTGTGTG	T	902.58	PASS	AB=0.914;AC=13;AF=0.241;AN=54;BaseQRankSum=-0.976;DP=599;FS=3.095;HRun=0;HaplotypeScore=150.6878;InbreedingCoeff=0.5572;MQ=64.13;MQ0=16;MQRankSum=-5.154;QD=4.96;ReadPosRankSum=0.469;VQSLOD=2.4438;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:14.73:0,15,370	0/0:11,0:10:15.05:0,15,276	./.	0/0:27,0:20:0:0,0,0	0/0:13,0:13:17.42:0,17,341	0/0:17,0:17:27.09:0,27,491	0/0:23,0:23:23.87:0,24,590	1/1:20,0:18:2.90:27,3,0	0/0:21,0:19:15.05:0,15,422	0/0:22,0:21:39.11:0,39,933	0/0:10,0:10:12.04:0,12,340	0/1:27,0:26:27.58:28,0,528	0/0:18,0:17:18.92:0,19,384	0/0:15,0:15:17.73:0,18,396	0/0:24,0:24:36.11:0,36,761	0/0:30,0:30:33.11:0,33,660	1/1:18,7:25:17.26:307,17,0	0/1:16,9:26:14.69:152,0,15	1/1:20,0:21:2.96:42,3,0	1/1:11,12:23:26.96:406,27,0	1/1:23,4:25:5.98:81,6,0	0/0:17,0:17:33.11:0,33,859	0/0:20,0:20:29.59:0,30,680	0/0:29,0:29:47.45:0,47,984	0/0:20,0:19:20.81:0,21,430	0/1:13,0:13:21.20:21,0,505	0/0:24,0:24:23.29:0,23,523	0/0:11,0:11:12.93:0,13,237
chr10	30394238	.	AGAG	A	19155.30	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-0.162;DP=770;FS=4.536;HRun=0;HaplotypeScore=119.9583;InbreedingCoeff=0.9162;MQ=79.69;MQ0=12;MQRankSum=-4.287;QD=27.25;ReadPosRankSum=5.000;VQSLOD=5.0200;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,44:49:99:1468,102,0	1/1:1,5:6:11.97:147,12,0	0/0:30,0:20:15.58:0,16,237	0/0:36,0:34:5.80:0,6,535	1/1:6,24:29:41.71:754,42,0	1/1:2,13:15:27.09:388,27,0	1/1:7,30:37:78.02:1122,78,0	1/1:11,19:29:48.14:643,48,0	1/1:6,25:30:57.10:820,57,0	1/1:7,20:26:54.18:762,54,0	1/1:3,16:19:36.12:518,36,0	1/1:5,17:22:45.15:648,45,0	1/1:9,21:31:54.15:755,54,0	1/1:7,22:29:57.19:820,57,0	1/1:14,25:39:54.18:777,54,0	1/1:3,18:22:51.17:734,51,0	1/1:1,30:31:72.24:1036,72,0	1/1:8,17:24:39.13:561,39,0	1/1:10,10:20:30.08:397,30,0	1/1:6,25:31:66.19:921,66,0	1/1:5,28:33:60.20:863,60,0	1/1:4,15:19:39.13:561,39,0	1/1:5,23:29:54.18:777,54,0	1/1:6,26:32:58.75:824,59,0	1/1:3,19:21:45.15:647,45,0	1/1:5,22:27:66.20:923,66,0	1/1:7,23:29:57.19:820,57,0	1/1:6,10:16:33.11:468,33,0
chr10	30394949	.	T	TAAACAAAC	31493.24	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-0.703;DP=478;FS=1.224;HRun=0;HaplotypeScore=140.5430;InbreedingCoeff=0.8143;MQ=45.36;MQ0=1;MQRankSum=-5.311;QD=69.37;ReadPosRankSum=2.471;VQSLOD=4.9872;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,7:17:17.65:619,18,0	1/1:7,6:13:27:854,27,0	0/0:11,0:8:3.58:0,4,226	0/0:13,0:11:21.07:0,21,495	1/1:15,14:29:63.21:2338,63,0	1/1:10,14:24:51.18:2116,51,0	1/1:6,10:17:21.07:879,21,0	1/1:26,8:36:33.08:936,33,0	1/1:9,7:16:30.10:1080,30,0	1/1:13,6:19:18.06:754,18,0	1/1:18,10:28:48.16:1933,48,0	1/1:3,12:15:42.14:1722,42,0	1/1:6,7:13:29.96:1066,30,0	1/1:10,9:19:45.15:1807,45,0	1/1:7,5:12:17.80:646,18,0	1/1:8,10:18:42.14:1634,42,0	1/1:9,3:12:18.06:656,18,0	1/1:7,1:8:14.88:293,15,0	1/1:9,3:13:14.91:523,15,0	1/1:10,12:22:51.17:1938,51,0	1/1:4,4:8:6.02:162,6,0	1/1:4,3:7:17.95:643,18,0	1/1:6,12:18:38.66:1630,39,0	1/1:10,3:13:15.05:538,15,0	1/1:6,9:15:39.13:1533,39,0	1/1:13,11:24:54:1913,54,0	1/1:18,12:30:63.21:2276,63,0	1/1:0,8:8:24.08:1005,24,0
chr10	30395037	.	CATAAATTTA	C	24678.51	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=1.692;DP=404;FS=0.000;HRun=0;HaplotypeScore=210.8049;InbreedingCoeff=0.8178;MQ=59.66;MQ0=0;MQRankSum=-5.371;QD=64.27;ReadPosRankSum=5.225;VQSLOD=4.1203;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,4:7:15.05:412,15,0	1/1:2,6:8:18.06:556,18,0	0/0:6,0:5:15.05:0,15,335	0/0:14,0:13:19.44:0,19,418	1/1:7,18:25:54.18:1420,54,0	1/1:4,15:19:45.15:1300,45,0	1/1:3,9:12:27.09:835,27,0	1/1:13,14:27:39.09:1078,39,0	1/1:3,14:17:42.14:1246,42,0	1/1:7,15:22:48.16:1334,48,0	1/1:3,15:18:45.15:1295,45,0	1/1:4,9:13:33.11:929,33,0	1/1:5,13:18:45.15:1293,45,0	1/1:5,10:15:30.10:837,30,0	1/1:2,12:14:36.12:1058,36,0	1/1:6,13:19:42.14:1253,42,0	1/1:4,3:7:18.06:417,18,0	1/1:6,2:8:9.03:257,9,0	1/1:3,2:5:6.02:186,6,0	1/1:3,17:20:51.18:1534,51,0	1/1:2,2:4:9.92:233,10,0	1/1:2,6:8:18.06:505,18,0	1/1:1,16:17:48.16:1391,48,0	1/1:2,2:4:6.02:186,6,0	1/1:4,15:19:48.16:1430,48,0	1/1:8,22:30:69.21:1885,69,0	1/1:7,17:24:48.16:1438,48,0	1/1:0,4:4:12.04:371,12,0
chr10	30395038	.	A	AGTTCTC	12936.88	PASS	AB=0.929;AC=53;AF=0.946;AN=56;BaseQRankSum=1.731;DP=323;FS=1.018;HRun=0;HaplotypeScore=211.9460;InbreedingCoeff=0.6124;MQ=63.64;MQ0=0;MQRankSum=-5.414;QD=41.07;ReadPosRankSum=5.400;VQSLOD=4.7317;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,1:5:15.04:371,15,0	1/1:6,0:6:18.04:299,18,0	0/0:8,0:5:14.79:0,15,250	0/1:12,0:12:3.50:3,0,329	1/1:18,1:19:54.04:852,54,0	1/1:15,1:16:45.07:644,45,0	1/1:9,0:9:27.04:322,27,0	1/1:17,0:17:48.13:715,48,0	1/1:14,0:15:42.07:562,42,0	1/1:15,1:17:48.15:874,48,0	1/1:15,0:15:44.86:557,45,0	1/1:9,2:11:27.07:415,27,0	1/1:13,2:15:45.06:712,45,0	1/1:10,1:11:30.01:417,30,0	1/1:12,0:13:36.04:548,36,0	1/1:13,1:14:42.07:548,42,0	1/1:3,2:6:18.02:372,18,0	1/1:2,1:3:9.03:294,9,0	1/1:2,0:2:6.02:75,6,0	1/1:17,0:17:51.02:529,51,0	1/1:2,2:4:12.03:248,12,0	1/1:6,0:6:18.03:314,18,0	1/1:16,1:17:47.98:548,48,0	1/1:2,1:3:5.98:47,6,0	1/1:15,0:16:48.07:675,48,0	1/1:22,0:24:66.21:1125,66,0	1/1:17,0:17:48.09:685,48,0	1/1:4,0:4:12.03:185,12,0
chr10	30395520	.	CCT	C	24897.01	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=0.341;DP=603;FS=10.178;HRun=0;HaplotypeScore=125.9502;InbreedingCoeff=0.9427;MQ=76.73;MQ0=0;MQRankSum=-8.930;QD=43.68;ReadPosRankSum=6.847;VQSLOD=5.7958;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,37:37:99:1707,105,0	1/1:0,8:8:21.07:342,21,0	0/0:19,0:19:52.90:0,53,819	0/0:14,0:14:41.80:0,42,721	1/1:0,18:18:48.16:781,48,0	1/1:0,22:22:54.18:879,54,0	1/1:1,33:34:87.30:1402,87,0	1/1:0,30:30:87.28:1391,87,0	1/1:0,25:25:72.25:1171,72,0	1/1:0,28:28:84.29:1367,84,0	1/1:0,17:17:48.16:781,48,0	1/1:0,23:23:60.20:975,60,0	1/1:0,27:27:72.25:1170,72,0	1/1:0,12:12:18:293,18,0	1/1:0,24:24:60.20:975,60,0	1/1:0,26:26:72.25:1171,72,0	1/1:0,25:25:66.23:1074,66,0	1/1:0,16:16:48.16:780,48,0	1/1:0,13:13:39.09:605,39,0	1/1:0,21:21:53.88:773,54,0	1/1:0,41:41:99:1805,111,0	1/1:0,16:16:42.14:682,42,0	1/1:0,17:17:42.14:683,42,0	1/1:0,19:19:54.18:879,54,0	1/1:0,22:22:63.22:1023,63,0	1/1:0,24:24:72.06:1071,72,0	1/1:0,23:23:63.22:1021,63,0	1/1:0,2:2:6.02:98,6,0
chr10	30395802	.	GTT	G	11911.74	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-13.204;DP=580;FS=0.800;HRun=8;HaplotypeScore=86.9126;InbreedingCoeff=0.9901;MQ=79.90;MQ0=3;MQRankSum=-4.277;QD=29.05;ReadPosRankSum=5.382;VQSLOD=4.7878;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,21:26:48.14:585,48,0	1/1:0,6:6:15.04:183,15,0	0/0:36,2:29:25.04:0,25,827	0/0:24,0:18:31.47:0,31,436	1/1:2,28:29:75.22:914,75,0	1/1:1,24:25:63.20:768,63,0	1/1:2,29:31:60.18:732,60,0	0/0:2,0:21:42.89:0,43,151	1/1:0,10:10:21.07:256,21,0	1/1:3,16:19:45.14:549,45,0	1/1:3,19:22:48.14:585,48,0	1/1:3,23:26:63.19:769,63,0	1/1:0,13:13:33.10:403,33,0	1/1:1,17:18:48.15:586,48,0	1/1:2,21:23:54.17:659,54,0	1/1:0,21:21:57.18:695,57,0	0/0:1,0:19:37.43:0,37,132	0/0:1,0:17:35.43:0,35,138	0/0:7,0:23:45.93:0,46,193	0/0:0,0:18:45.86:0,46,180	0/0:2,0:10:19.96:0,20,70	1/1:1,14:15:33.10:401,33,0	1/1:0,16:16:41.91:512,42,0	1/1:2,22:24:54.17:659,54,0	1/1:2,13:15:30.09:366,30,0	1/1:2,41:43:99:1485,123,0	1/1:1,22:23:54.01:659,54,0	1/1:0,4:4:12.04:146,12,0
chr10	30397630	.	AAGG	A	1114.27	PASS	AB=0.826;AC=20;AF=0.357;AN=56;BaseQRankSum=8.175;DP=413;FS=0.000;HRun=0;HaplotypeScore=121.2552;InbreedingCoeff=-0.4545;MQ=44.70;MQ0=28;MQRankSum=-2.069;QD=4.08;ReadPosRankSum=10.999;VQSLOD=0.4882;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:15,1:16:33.53:113,0,34	1/1:4,1:4:0.29:33,0,0	0/0:12,0:6:8.52:0,9,85	0/0:10,0:3:6.01:0,6,63	0/1:12,5:15:20.26:48,0,20	0/1:13,2:15:22.93:23,0,36	0/1:14,1:14:26.20:26,0,83	0/0:33,0:27:71.96:0,72,1177	0/1:15,7:22:93.66:160,0,94	0/1:10,2:10:31.30:55,0,31	0/1:13,1:13:25.87:26,0,51	0/1:12,4:16:48.04:49,0,48	0/1:12,3:14:17.83:91,0,18	0/1:6,6:11:10.12:109,0,10	0/1:17,4:21:58.81:64,0,59	0/1:9,2:11:44.48:44,0,49	0/0:14,0:13:35.96:0,36,513	0/0:13,0:14:39.59:0,40,568	0/0:22,0:16:27.31:0,27,616	0/0:17,0:17:39.13:0,39,627	0/0:12,0:9:15.94:0,16,262	0/1:14,1:14:12.32:12,0,111	0/1:5,5:9:61.73:62,0,74	0/0:6,0:6:11.39:0,11,65	0/1:8,4:12:74.39:74,0,91	0/1:15,6:20:53.53:161,0,54	0/1:17,3:20:98.37:98,0,105	0/1:3,1:4:17.68:24,0,18
chr10	30397650	.	GAGGA	G	6230.41	PASS	AB=0.958;AC=46;AF=0.885;AN=52;BaseQRankSum=-3.982;DP=355;FS=5.580;HRun=0;HaplotypeScore=111.3958;InbreedingCoeff=-0.1064;MQ=42.26;MQ0=31;MQRankSum=2.514;QD=17.75;ReadPosRankSum=1.587;VQSLOD=4.4367;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:13,1:14:36.55:310,37,0	1/1:2,1:2:6.01:73,6,0	./.	./.	1/1:6,11:15:21:245,21,0	1/1:2,13:15:9.03:123,9,0	1/1:13,0:12:28.30:261,28,0	0/1:24,0:15:33.48:33,0,64	1/1:20,2:21:56.90:640,57,0	1/1:4,7:9:25.62:303,26,0	1/1:13,2:14:32.94:393,33,0	1/1:3,11:13:15.05:229,15,0	1/1:16,2:17:47.80:477,48,0	1/1:5,8:11:21.07:314,21,0	1/1:6,17:23:17.76:266,18,0	1/1:7,2:9:25.25:273,25,0	0/1:10,0:10:7.59:8,0,72	0/1:7,0:8:57.86:71,0,58	0/1:16,0:11:75.22:94,0,75	1/1:14,0:17:12.79:156,13,0	0/1:9,0:7:11.97:42,0,12	1/1:10,1:10:23.91:248,24,0	1/1:7,4:10:17.93:261,18,0	1/1:3,0:3:3:25,3,0	0/1:8,4:12:12.25:307,0,12	1/1:19,2:20:51.02:605,51,0	1/1:13,2:15:38.84:400,39,0	1/1:1,1:2:6:73,6,0
chr10	30397652	.	G	GT	252.25	PASS	AB=0.817;AC=6;AF=0.115;AN=52;BaseQRankSum=-4.540;DP=355;FS=4.882;HRun=0;HaplotypeScore=119.2241;InbreedingCoeff=-0.1463;MQ=41.93;MQ0=32;MQRankSum=-5.930;QD=2.74;ReadPosRankSum=-3.981;VQSLOD=1.9709;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:38.30:0,38,416	0/0:3,0:2:5.69:0,6,50	./.	./.	0/0:17,0:15:20.39:0,20,184	0/0:15,0:15:8.93:0,9,71	0/0:15,0:14:32.97:0,33,361	0/1:16,9:16:99:117,0,155	0/0:22,0:21:60.13:0,60,540	0/0:11,0:9:26.90:0,27,237	0/0:15,0:14:32.18:0,32,278	0/0:13,0:12:16.96:0,17,102	0/0:18,0:17:50.28:0,50,460	0/0:13,0:11:22.51:0,23,134	0/0:21,0:21:23.11:0,23,149	0/0:9,0:9:23.61:0,24,223	0/1:8,3:9:25.04:25,0,107	0/1:7,2:9:35.09:35,0,106	0/1:17,2:12:57.19:57,0,88	0/1:11,6:17:70.07:119,0,70	0/1:10,1:7:20.01:20,0,81	0/0:10,0:9:23.58:0,24,213	0/0:10,0:9:17:0,17,107	0/0:2,0:2:2.99:0,3,24	0/0:12,0:12:22.95:0,23,151	0/0:21,0:20:46.95:0,47,419	0/0:15,0:15:39.73:0,40,352	0/0:2,0:2:3.22:0,3,13
chr10	30398016	.	CAG	C	9466.09	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=2.612;DP=548;FS=0.000;HRun=0;HaplotypeScore=105.6272;InbreedingCoeff=0.7800;MQ=53.52;MQ0=42;MQRankSum=2.565;QD=18.97;ReadPosRankSum=4.236;VQSLOD=4.9621;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:25,7:29:50.93:640,51,0	1/1:4,0:4:6.89:71,7,0	0/0:24,0:13:19.41:0,19,267	0/0:25,0:19:12.12:0,12,396	1/1:7,7:13:27.04:362,27,0	1/1:0,10:10:8.99:111,9,0	1/1:14,5:15:38.98:460,39,0	1/1:20,3:17:39.34:414,39,0	1/1:8,2:9:23.96:271,24,0	1/1:6,18:19:52.93:567,53,0	1/1:12,4:16:29.57:396,30,0	1/1:12,4:15:32.58:405,33,0	1/1:5,11:15:29.93:427,30,0	1/1:13,7:19:44.80:516,45,0	1/1:3,23:25:14.85:228,15,0	1/1:17,9:24:51:613,51,0	1/1:5,24:28:29.66:425,30,0	1/1:9,5:14:38.83:444,39,0	1/1:4,11:12:30.06:394,30,0	1/1:13,0:11:5.99:48,6,0	1/1:8,45:49:33.03:466,33,0	1/1:7,7:13:15.01:200,15,0	1/1:3,19:20:9.03:136,9,0	1/1:13,16:29:53.95:699,54,0	1/1:0,14:14:6.02:92,6,0	1/1:16,5:19:29.06:614,29,0	1/1:10,4:13:26.78:287,27,0	1/1:3,2:5:15.02:181,15,0
chr10	30398032	.	CAG	C	544.03	PASS	AB=0.965;AC=18;AF=0.333;AN=54;BaseQRankSum=-4.007;DP=526;FS=23.287;HRun=0;HaplotypeScore=164.6709;InbreedingCoeff=0.2648;MQ=44.50;MQ0=55;MQRankSum=-5.669;QD=2.31;ReadPosRankSum=4.177;VQSLOD=1.1238;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:27,5:27:0.45:0,0,43	0/1:5,0:5:16.02:17,0,16	0/0:6,0:3:5.41:0,5,43	0/0:9,0:4:6.66:0,7,81	0/1:19,0:18:4.95:5,0,31	0/0:16,0:16:19.95:0,20,147	0/1:15,0:11:6.99:7,0,8	1/1:22,2:13:30.24:271,30,0	0/0:11,1:11:12.37:0,12,75	0/1:21,1:16:32.07:92,0,32	0/1:17,1:17:4.49:4,0,48	0/0:15,0:14:16.26:0,16,79	0/1:22,0:21:29.67:30,0,34	0/0:20,0:19:18.49:0,18,131	0/0:23,0:22:13.16:0,13,57	0/0:25,0:23:10.36:0,10,94	1/1:27,1:27:12.85:69,13,0	1/1:11,0:11:11.56:70,12,0	1/1:18,0:12:14.27:72,14,0	./.	0/0:50,1:44:0.79:0,1,33	0/0:17,0:15:11.71:0,12,50	0/0:20,0:18:4:0,4,10	0/0:28,0:27:13.33:0,13,67	0/0:14,0:13:9.02:0,9,51	0/0:22,0:18:8.50:0,9,155	0/1:17,1:16:20.22:20,0,64	1/1:4,0:4:2.58:51,3,0
chr10	30398040	.	CAG	C	3037.41	PASS	AB=0.997;AC=34;AF=0.630;AN=54;BaseQRankSum=-5.907;DP=527;FS=16.206;HRun=0;HaplotypeScore=162.8966;InbreedingCoeff=-0.3621;MQ=43.87;MQ0=59;MQRankSum=1.752;QD=5.96;ReadPosRankSum=4.177;VQSLOD=2.1510;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:34,0:29:13:184,0,13	0/1:4,0:4:7.03:39,0,7	./.	0/1:6,0:3:0.84:1,0,20	0/1:19,0:18:22.83:103,0,23	0/0:15,0:15:20.11:0,20,127	1/1:16,0:12:14.92:119,15,0	0/1:28,2:15:16.44:161,0,16	0/1:19,0:18:29.37:29,0,113	0/1:24,0:18:18.49:193,0,18	1/1:18,0:16:4.15:99,4,0	0/1:14,0:13:33.21:98,0,33	0/1:24,0:23:6.80:125,0,7	0/1:20,0:19:50.46:148,0,50	0/1:21,0:20:35.88:36,0,67	0/1:23,0:21:93.39:132,0,93	1/1:24,2:26:37.26:282,37,0	1/1:11,0:11:29.58:209,30,0	1/1:17,0:11:32.55:224,33,0	1/1:14,0:11:2.99:24,3,0	0/1:49,0:42:22.73:219,0,23	0/1:15,0:13:0.87:65,0,1	0/1:17,0:15:2.14:58,0,2	1/1:25,0:24:4.54:234,5,0	0/1:16,0:15:7.59:57,0,8	0/1:24,0:19:99:199,0,103	0/1:20,0:18:99:101,0,134	1/1:3,0:3:8.32:50,8,0
chr10	30398054	.	C	CAG	110.52	PASS	AB=0.916;AC=9;AF=0.161;AN=56;BaseQRankSum=-3.096;DP=541;FS=8.737;HRun=0;HaplotypeScore=178.6174;InbreedingCoeff=0.2458;MQ=43.38;MQ0=49;MQRankSum=-1.328;QD=0.77;ReadPosRankSum=0.722;VQSLOD=2.0513;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:28:31.74:0,32,310	0/0:4,0:4:9:0,9,104	0/0:6,0:1:2.97:0,3,20	0/1:7,0:1:0:0,0,0	0/0:19,0:18:24.80:0,25,230	0/0:17,0:17:30.04:0,30,356	0/0:17,0:13:4.17:0,4,20	0/1:29,0:18:4.19:4,0,176	0/0:22,0:21:45.04:0,45,496	0/0:22,0:18:49.24:0,49,377	0/0:20,0:18:30.78:0,31,263	0/0:13,0:13:25.30:0,25,241	0/0:24,0:23:30.42:0,30,265	0/0:19,0:18:34.71:0,35,375	0/0:20,0:19:20.98:0,21,216	0/0:26,0:24:34.71:0,35,352	0/1:27,2:28:83.13:83,0,130	0/1:7,5:14:41.11:41,0,58	0/0:16,0:12:15.39:0,15,160	1/1:16,0:13:2.65:50,3,0	0/1:46,1:41:41.02:41,0,116	0/0:16,0:14:18.85:0,19,181	0/0:14,0:12:12.85:0,13,111	0/0:21,0:21:22.80:0,23,172	0/0:17,0:16:15.02:0,15,166	0/0:31,0:26:58.36:0,58,535	0/0:20,0:18:38.26:0,38,391	1/1:2,0:2:2.53:11,3,0
chr10	30398072	.	CACACAG	C	7641.40	PASS	AB=1.000;AC=46;AF=0.821;AN=56;BaseQRankSum=-4.682;DP=521;FS=3.563;HRun=0;HaplotypeScore=151.2922;InbreedingCoeff=0.4091;MQ=52.00;MQ0=41;MQRankSum=3.718;QD=16.43;ReadPosRankSum=-0.421;VQSLOD=4.4807;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:22,1:20:35.60:417,36,0	1/1:5,0:5:10.76:121,11,0	0/0:26,0:14:34.82:0,35,412	0/0:28,0:16:27.76:0,28,365	1/1:14,1:15:20.72:338,21,0	1/1:16,0:16:15.97:270,16,0	1/1:7,13:16:5.91:68,6,0	0/1:31,0:23:42.62:231,0,43	1/1:23,1:23:28.02:510,28,0	1/1:17,0:15:34.38:477,34,0	1/1:19,0:17:28.89:431,29,0	1/1:12,0:12:6:346,6,0	1/1:18,0:17:30.70:381,31,0	1/1:24,0:23:34.96:501,35,0	0/1:10,0:10:0.79:164,0,1	1/1:22,0:21:28.03:668,28,0	0/1:20,0:19:16.74:83,0,17	1/1:13,0:13:14.10:94,14,0	0/1:15,0:12:0.95:171,0,1	1/1:14,0:13:11.57:122,12,0	1/1:44,0:39:10.88:229,11,0	1/1:14,1:13:24.52:348,25,0	1/1:10,0:8:18.01:192,18,0	1/1:16,0:16:3.03:226,3,0	1/1:13,0:13:19.17:185,19,0	1/1:33,0:28:40.35:827,40,0	1/1:16,0:15:2.22:243,2,0	0/0:2,0:2:2.37:0,2,8
chr10	30398076	.	CAG	C	5194.65	PASS	AB=1.000;AC=44;AF=0.786;AN=56;BaseQRankSum=-7.891;DP=549;FS=5.152;HRun=0;HaplotypeScore=137.7293;InbreedingCoeff=-0.0267;MQ=57.47;MQ0=32;MQRankSum=0.682;QD=10.05;ReadPosRankSum=-6.029;VQSLOD=2.6885;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:21:1.14:179,0,1	1/1:6,0:6:3.06:80,3,0	0/0:32,0:19:31.43:0,31,379	0/1:31,0:19:0.18:0,0,275	0/1:17,0:17:2.44:149,0,2	0/1:17,0:17:40.54:89,0,41	1/1:19,0:16:5.92:43,6,0	1/1:34,0:27:24.30:424,24,0	0/1:23,0:23:50.20:187,0,50	1/1:17,0:16:23.77:351,24,0	1/1:21,0:19:25.79:274,26,0	0/1:12,0:12:6.30:180,0,6	1/1:18,1:18:1.28:156,1,0	0/1:25,0:25:19.66:215,0,20	0/1:12,0:12:25.39:117,0,25	0/1:22,0:21:20.46:249,0,20	1/1:18,1:19:39.24:253,39,0	1/1:13,0:13:17.20:108,17,0	1/1:20,0:17:17.59:299,18,0	1/1:14,0:13:20.87:200,21,0	1/1:45,0:40:18.97:303,19,0	1/1:15,0:14:6.07:142,6,0	1/1:8,1:8:8.01:114,8,0	1/1:19,0:19:13.01:257,13,0	1/1:13,0:13:4.46:120,4,0	1/1:32,1:29:13.29:447,13,0	0/1:17,0:16:29.78:243,0,30	1/1:2,0:2:2.90:16,3,0
chr10	30398628	.	ATTTTTT	A	16511.53	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-6.032;DP=569;FS=20.310;HRun=16;HaplotypeScore=142.7668;InbreedingCoeff=0.8200;MQ=71.55;MQ0=1;MQRankSum=-7.539;QD=34.33;ReadPosRankSum=5.984;VQSLOD=1.8368;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,11:20:14.59:251,15,0	1/1:2,1:3:2.99:54,3,0	0/0:38,0:21:29.57:0,30,536	0/0:48,0:35:65.81:0,66,1229	1/1:5,21:26:47.76:858,48,0	1/1:5,24:29:69.07:1226,69,0	1/1:3,17:20:45.07:810,45,0	1/1:6,11:18:35.96:590,36,0	1/1:4,12:16:26.99:486,27,0	1/1:2,14:17:45.07:791,45,0	1/1:6,11:17:36.04:648,36,0	1/1:3,12:15:33.03:594,33,0	1/1:5,20:27:59.97:1022,60,0	1/1:2,16:18:36.01:648,36,0	1/1:2,14:16:33.03:590,33,0	1/1:7,16:23:35.84:648,36,0	1/1:10,16:26:26.82:486,27,0	1/1:2,12:15:32.90:553,33,0	1/1:5,8:14:26.94:460,27,0	1/1:7,16:24:50.90:876,51,0	1/1:3,8:11:11.95:216,12,0	1/1:4,19:24:56.91:986,57,0	1/1:3,15:18:45.04:810,45,0	1/1:6,11:18:17.73:285,18,0	1/1:4,12:17:36:629,36,0	1/1:5,18:23:54.05:972,54,0	1/1:3,20:23:54.13:971,54,0	1/1:1,2:3:3.01:54,3,0
chr10	30402110	.	GAA	G	14865.23	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-7.543;DP=640;FS=0.000;HRun=11;HaplotypeScore=82.7611;InbreedingCoeff=0.9670;MQ=78.45;MQ0=1;MQRankSum=-5.477;QD=25.11;ReadPosRankSum=3.608;VQSLOD=4.8821;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,22:22:48.12:511,48,0	1/1:0,8:8:24.06:255,24,0	0/0:25,0:22:27.56:0,28,248	0/0:20,1:17:23.18:0,23,327	1/1:1,22:23:66.16:702,66,0	1/1:3,27:30:63.10:726,63,0	1/1:0,20:20:54.14:575,54,0	1/1:3,25:28:72.09:741,72,0	1/1:4,20:25:59.88:619,60,0	1/1:8,29:37:80.97:837,81,0	1/1:4,15:19:42.07:447,42,0	1/1:5,26:31:66.15:702,66,0	1/1:3,21:24:60.15:639,60,0	1/1:2,23:27:56.81:642,57,0	1/1:5,20:25:60.13:639,60,0	1/1:2,15:17:39.08:415,39,0	1/1:4,22:28:25.25:538,25,0	1/1:6,16:22:42.07:447,42,0	1/1:5,21:26:63.12:662,63,0	1/1:2,23:25:63.14:671,63,0	1/1:1,15:16:33.08:351,33,0	1/1:1,18:19:54.13:575,54,0	1/1:2,22:24:63.15:671,63,0	1/1:2,14:16:36.08:383,36,0	1/1:2,19:22:53.87:555,54,0	1/1:2,27:29:80.39:829,80,0	1/1:2,23:24:60.15:639,60,0	1/1:0,3:3:9.02:96,9,0
chr10	30405065	.	C	CA	25614.61	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=0.246;DP=736;FS=6.198;HRun=3;HaplotypeScore=98.6695;InbreedingCoeff=0.9995;MQ=75.85;MQ0=0;MQRankSum=-10.224;QD=36.91;ReadPosRankSum=5.703;VQSLOD=4.5159;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,42:44:99:1596,114,0	1/1:0,12:12:30.10:420,30,0	0/0:26,0:26:69.05:0,69,777	0/0:16,0:16:42.10:0,42,489	1/1:1,18:19:48.12:650,48,0	1/1:0,24:24:69.23:966,69,0	1/1:1,34:35:93.31:1302,93,0	1/1:1,30:31:87.28:1198,87,0	1/1:1,28:29:81.24:1113,81,0	1/1:1,20:21:60.20:836,60,0	1/1:3,16:19:39.09:524,39,0	1/1:1,27:28:81.27:1134,81,0	1/1:2,33:35:96.32:1344,96,0	1/1:3,23:26:63.21:882,63,0	1/1:1,38:39:99:1554,111,0	1/1:1,21:22:60.20:840,60,0	1/1:4,26:30:75.25:1047,75,0	1/1:1,14:15:39.13:538,39,0	1/1:2,17:19:54.18:751,54,0	1/1:0,23:23:66.22:923,66,0	1/1:1,30:32:78.24:1073,78,0	1/1:2,30:32:81.23:1107,81,0	1/1:3,24:27:66.22:923,66,0	1/1:1,23:24:66.22:924,66,0	1/1:1,39:40:99:1512,108,0	1/1:1,22:23:66.22:917,66,0	1/1:3,27:30:78.26:1092,78,0	1/1:1,14:15:33.10:447,33,0
chr10	30406662	.	CT	C	1781.82	PASS	AB=0.768;AC=18;AF=0.321;AN=56;BaseQRankSum=8.490;DP=487;FS=2.605;HRun=1;HaplotypeScore=132.3246;InbreedingCoeff=-0.2732;MQ=44.94;MQ0=29;MQRankSum=-7.560;QD=6.65;ReadPosRankSum=-3.298;VQSLOD=-0.5234;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:17,3:17:6.93:7,0,56	0/1:7,2:9:27.51:138,0,28	0/0:25,0:8:7.40:0,7,92	0/0:43,0:17:27.41:0,27,368	0/0:11,10:21:7.21:0,7,18	0/1:11,8:17:51.09:69,0,51	0/1:11,4:14:81.88:82,0,102	0/0:23,0:18:51.16:0,51,641	0/1:11,5:16:82.91:119,0,83	0/1:12,8:17:99:277,0,168	0/1:11,4:15:1.36:17,0,1	0/1:9,6:14:56.57:146,0,57	0/1:9,4:12:99:102,0,140	0/1:6,7:13:44.73:76,0,45	1/1:14,7:19:23.73:221,24,0	0/1:7,4:11:99:107,0,128	0/0:15,0:14:33.08:0,33,412	0/0:18,0:17:51.11:0,51,624	0/0:16,0:13:39.12:0,39,496	0/0:20,0:20:42.06:0,42,511	0/0:9,0:7:15.52:0,16,208	0/1:13,5:17:9.24:9,0,70	0/0:4,4:8:0.94:0,1,2	0/0:17,4:20:4.01:0,4,42	0/1:11,4:15:28.21:74,0,28	0/1:11,5:16:99:179,0,206	0/1:16,8:24:99:274,0,366	0/1:7,1:6:41.94:42,0,72
chr10	30406665	.	T	TC	2127.69	PASS	AB=0.898;AC=23;AF=0.411;AN=56;BaseQRankSum=8.936;DP=509;FS=21.206;HRun=1;HaplotypeScore=140.4791;InbreedingCoeff=-0.2502;MQ=50.16;MQ0=31;MQRankSum=-8.017;QD=6.47;ReadPosRankSum=-0.148;VQSLOD=-0.7418;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:17,2:17:5.12:5,0,42	0/1:7,2:9:34.41:134,0,34	0/0:29,0:12:9.24:0,9,113	0/0:47,0:21:37.53:0,38,454	1/1:20,1:21:0.57:12,1,0	0/1:20,2:19:40.42:103,0,40	0/1:15,1:14:56.55:74,0,57	0/0:25,0:20:57.13:0,57,680	0/1:13,3:16:25.34:93,0,25	0/1:19,2:18:77.77:359,0,78	0/1:13,2:15:7.51:8,0,9	0/1:14,0:13:28.48:134,0,28	0/1:13,1:12:86.20:136,0,86	0/1:12,2:14:4.34:146,0,4	1/1:16,5:19:13.23:169,13,0	0/1:11,0:11:92.03:99,0,92	0/0:16,0:15:32.12:0,32,375	0/0:18,0:17:47.58:0,48,509	0/0:16,0:13:37.13:0,37,414	0/0:19,0:19:41.87:0,42,533	0/0:9,0:7:15.52:0,16,183	0/1:15,3:17:2.17:2,0,71	1/1:8,0:8:3.01:9,3,0	0/1:18,3:20:4.67:5,0,33	0/1:13,3:16:36.42:46,0,36	0/1:12,4:16:48.90:341,0,49	0/1:27,1:28:99:333,0,251	0/1:7,1:6:28.48:82,0,28
chr10	30406668	.	CT	C	4010.32	PASS	AB=0.700;AC=21;AF=0.375;AN=56;BaseQRankSum=8.109;DP=497;FS=0.496;HRun=1;HaplotypeScore=129.5021;InbreedingCoeff=0.0600;MQ=50.64;MQ0=30;MQRankSum=-7.943;QD=15.02;ReadPosRankSum=0.587;VQSLOD=3.4429;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:13,5:15:9:115,0,9	0/1:6,3:9:14.12:168,0,14	0/0:31,0:13:20.62:0,21,215	0/0:48,0:22:28.05:0,28,465	0/0:9,12:21:7.22:0,7,18	0/1:9,13:19:0.70:211,0,1	0/1:12,4:14:26.34:233,0,26	0/0:25,0:20:56.64:0,57,629	1/1:7,6:13:17.74:323,18,0	0/1:8,12:18:99:415,0,100	0/1:6,9:15:1.30:39,0,1	0/1:7,7:13:34.74:183,0,35	0/1:6,7:11:29.90:220,0,30	1/1:4,9:13:24.06:293,24,0	1/1:11,10:19:30.79:466,31,0	0/1:5,5:10:18.02:173,0,18	0/0:16,0:15:36.11:0,36,465	0/0:16,0:15:45.12:0,45,550	0/0:16,0:13:38.84:0,39,455	0/0:19,0:19:42.10:0,42,537	0/0:9,0:7:15.48:0,15,190	0/1:11,7:17:44.30:44,0,54	0/0:2,6:8:0.94:0,1,2	0/0:15,5:19:4.25:0,4,41	1/1:8,6:14:13.48:243,13,0	0/1:10,6:16:38.82:383,0,39	0/1:13,14:27:99:404,0,244	0/1:6,2:6:34.19:98,0,34
chr10	30406669	.	T	TC	4832.19	PASS	AB=0.907;AC=32;AF=0.571;AN=56;BaseQRankSum=8.924;DP=506;FS=3.112;HRun=1;HaplotypeScore=131.4054;InbreedingCoeff=0.3273;MQ=51.68;MQ0=30;MQRankSum=-10.596;QD=14.96;ReadPosRankSum=-3.122;VQSLOD=3.6785;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,3:15:17.45:146,17,0	1/1:5,2:7:20.24:220,20,0	0/0:33,0:14:16.76:0,17,205	0/0:49,0:22:25.65:0,26,445	1/1:19,2:21:0.57:12,1,0	1/1:21,2:20:32.97:306,33,0	1/1:10,5:15:11.52:308,12,0	0/0:26,0:21:46.19:0,46,518	1/1:10,3:13:28.47:339,28,0	0/1:19,2:19:46.74:466,0,47	0/1:12,3:15:8.38:32,0,8	0/1:14,0:13:18.28:193,0,18	0/1:12,1:11:13.81:258,0,14	1/1:11,2:14:27.09:370,27,0	1/1:16,5:19:41.08:492,41,0	0/1:10,0:10:15.94:189,0,16	0/0:16,0:15:35.13:0,35,412	0/0:15,0:14:40.34:0,40,445	0/0:16,0:13:30.54:0,31,332	0/0:19,0:19:38.72:0,39,512	0/0:9,0:7:9.34:0,9,140	0/1:12,7:18:30.73:47,0,31	1/1:9,0:9:3.01:9,3,0	1/1:18,3:20:5.50:50,5,0	1/1:11,3:14:26.22:273,26,0	1/1:11,8:19:2.91:567,3,0	0/1:26,1:27:99:423,0,162	0/1:7,1:6:22.21:133,0,22
chr10	30409543	.	AT	A	3702.46	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=2.238;DP=488;FS=2.427;HRun=10;HaplotypeScore=208.0168;InbreedingCoeff=0.8379;MQ=68.42;MQ0=2;MQRankSum=-5.568;QD=8.08;ReadPosRankSum=4.213;VQSLOD=0.2297;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:28:34.40:99,34,0	1/1:13,0:13:23.74:69,24,0	0/0:16,0:14:10.18:0,10,97	0/0:13,0:12:19.75:0,20,151	1/1:29,0:29:44.59:129,45,0	1/1:18,0:18:24.44:71,24,0	1/1:22,0:22:28.51:83,29,0	1/1:7,20:27:59.91:501,60,0	1/1:9,0:9:8.14:24,8,0	1/1:21,0:21:17.16:50,17,0	1/1:14,0:14:19.66:56,20,0	1/1:13,0:13:12.21:36,12,0	1/1:15,0:15:20.37:59,20,0	1/1:12,0:12:12.22:36,12,0	1/1:15,0:15:14.25:42,14,0	1/1:14,0:14:16.29:48,16,0	1/1:3,24:27:68.89:589,69,0	1/1:3,18:21:44.99:391,45,0	1/1:4,20:24:59.97:517,60,0	1/1:1,12:13:35.84:294,36,0	1/1:0,7:7:18:156,18,0	1/1:12,0:12:13.77:40,14,0	1/1:32,0:32:36.43:106,36,0	1/1:10,0:10:14.26:42,14,0	1/1:22,0:22:36.22:105,36,0	1/1:13,0:13:10.17:30,10,0	1/1:20,0:20:30.55:89,31,0	1/1:7,0:7:14.26:42,14,0
chr10	30409549	.	TTTTTAAAAAAGAGACTTG	T	32736.63	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=12.242;DP=517;FS=2.954;HRun=0;HaplotypeScore=264.6216;InbreedingCoeff=0.9865;MQ=67.91;MQ0=2;MQRankSum=-14.150;QD=87.53;ReadPosRankSum=6.447;VQSLOD=4.3526;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,23:31:51.12:2573,51,0	1/1:0,14:14:36.12:1814,36,0	0/0:13,0:11:23.94:0,24,748	0/0:19,0:17:40.76:0,41,1387	1/1:4,29:33:75.16:3469,75,0	1/1:4,16:20:36.09:1818,36,0	1/1:5,19:24:42.11:2121,42,0	0/0:23,0:23:69.24:0,69,3676	1/1:1,8:9:12.03:606,12,0	1/1:8,15:23:36.03:1449,36,0	1/1:2,16:18:36.04:1604,36,0	1/1:2,11:13:18.05:909,18,0	1/1:3,16:19:30.09:1515,30,0	1/1:3,9:12:18.04:909,18,0	1/1:4,14:18:21.05:1061,21,0	1/1:4,10:14:24.05:1212,24,0	0/0:26,0:26:72.25:0,72,4890	0/0:19,0:19:48.15:0,48,3202	0/0:23,0:23:69.24:0,69,4290	0/0:13,0:13:39.13:0,39,2750	0/0:7,0:7:18.06:0,18,1228	1/1:4,10:14:21.04:1058,21,0	1/1:10,20:30:54.11:2726,54,0	1/1:1,11:12:21.07:1061,21,0	1/1:3,25:28:54.17:2675,54,0	1/1:5,8:13:20.98:823,21,0	1/1:2,20:22:45.14:2273,45,0	1/1:0,7:7:21.07:1061,21,0
chr10	30409935	.	G	GT	2239.02	PASS	AB=1.000;AC=43;AF=0.768;AN=56;BaseQRankSum=-10.780;DP=650;FS=28.788;HRun=8;HaplotypeScore=133.8882;InbreedingCoeff=0.3369;MQ=72.45;MQ0=11;MQRankSum=3.551;QD=4.01;ReadPosRankSum=1.085;VQSLOD=-0.3710;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:36,0:35:8.64:32,9,0	0/0:12,0:12:1.94:0,2,26	0/0:26,0:18:6.37:0,6,154	0/1:26,0:19:7.25:7,0,179	1/1:31,0:30:33.26:242,33,0	0/0:21,0:20:1.73:0,2,6	1/1:20,0:20:5.99:25,6,0	1/1:30,0:30:53.17:520,53,0	0/1:21,0:21:0.67:29,0,1	1/1:24,0:23:14.94:104,15,0	1/1:15,0:15:8.67:93,9,0	1/1:19,0:19:4.44:26,4,0	0/1:22,0:22:0.64:4,0,1	0/1:18,0:17:1.16:19,0,1	0/0:32,0:32:3.51:0,4,10	1/1:22,0:22:0.59:5,1,0	1/1:15,0:14:2.13:18,2,0	1/1:30,0:30:7.80:44,8,0	1/1:28,0:27:18.29:233,18,0	1/1:28,0:27:30.19:275,30,0	1/1:27,0:27:0.23:16,0,0	1/1:17,0:16:17.14:151,17,0	1/1:21,0:21:6.17:79,6,0	1/1:17,0:17:3.85:16,4,0	1/1:28,0:28:7.26:49,7,0	1/1:16,10:26:38.81:319,39,0	1/1:28,0:28:7.86:57,8,0	0/1:10,0:10:0.16:0,0,2
chr10	30409940	.	TTTTG	T	17070.18	PASS	AB=1.000;AC=53;AF=0.946;AN=56;BaseQRankSum=-3.606;DP=639;FS=10.937;HRun=0;HaplotypeScore=104.0479;InbreedingCoeff=0.7166;MQ=71.74;MQ0=12;MQRankSum=-0.968;QD=27.76;ReadPosRankSum=4.995;VQSLOD=4.1748;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,34:35:43.41:732,43,0	1/1:1,10:11:21.05:344,21,0	0/0:24,0:16:12.33:0,12,333	0/1:25,0:19:3.25:3,0,235	1/1:1,28:28:69.19:1170,69,0	1/1:1,21:21:30.10:536,30,0	1/1:1,21:22:9.03:161,9,0	1/1:5,23:28:19.53:729,20,0	1/1:2,18:20:20.61:316,21,0	1/1:3,17:19:45.14:734,45,0	1/1:2,10:12:30.04:470,30,0	1/1:1,17:18:30.10:535,30,0	1/1:0,22:22:22.50:426,23,0	1/1:0,21:20:23.96:427,24,0	1/1:4,26:30:39.13:696,39,0	1/1:0,21:21:36.12:643,36,0	1/1:1,14:14:18.03:321,18,0	1/1:2,28:30:47.37:809,47,0	1/1:6,20:25:63.19:959,63,0	1/1:2,29:30:84.21:1327,84,0	1/1:2,27:28:51.17:910,51,0	1/1:1,17:17:42.10:638,42,0	1/1:0,22:22:32.20:566,32,0	1/1:0,14:14:21.07:375,21,0	1/1:1,25:26:45.15:803,45,0	1/1:13,13:26:74.46:1177,74,0	1/1:1,29:30:51.17:890,51,0	1/1:0,10:10:21.07:375,21,0
chr10	30412551	.	T	TAC	557.81	PASS	AB=0.857;AC=24;AF=0.571;AN=42;BaseQRankSum=-3.826;DP=117;FS=26.544;HRun=0;HaplotypeScore=39.3362;InbreedingCoeff=0.5646;MQ=67.74;MQ0=5;MQRankSum=2.571;QD=11.62;ReadPosRankSum=-0.732;VQSLOD=1.3367;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:2,0:1:2.84:0,3,14	0/0:12,0:7:4.77:0,5,37	1/1:2,0:2:3:25,3,0	1/1:3,0:3:2.99:24,3,0	./.	0/0:17,0:16:39.95:0,40,287	1/1:3,1:4:4.81:30,5,0	0/1:2,0:2:0.53:1,0,4	1/1:3,1:4:5.99:50,6,0	0/1:3,2:5:6.03:62,0,6	1/1:4,1:5:5.99:50,6,0	1/1:0,1:1:3.01:44,3,0	./.	0/0:4,0:4:11.81:0,12,75	0/0:9,0:8:14.90:0,15,118	0/0:9,0:9:26.92:0,27,248	0/0:5,0:5:11.95:0,12,108	./.	0/0:5,0:5:5.95:0,6,43	./.	1/1:7,0:7:20.97:173,21,0	1/1:2,0:2:5.99:50,6,0	1/1:3,2:5:6:53,6,0	./.	1/1:3,1:4:8.98:73,9,0	1/1:2,2:3:6.02:73,6,0
chr10	30412568	.	A	ATG	63.62	PASS	AB=0.813;AC=13;AF=0.361;AN=36;BaseQRankSum=0.015;DP=99;FS=6.307;HRun=0;HaplotypeScore=46.4159;InbreedingCoeff=0.3898;MQ=36.68;MQ0=4;MQRankSum=-0.852;QD=2.45;ReadPosRankSum=0.881;VQSLOD=0.4867;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	0/0:6,0:1:0.89:0,1,2	0/1:2,0:2:0:0,0,0	0/0:4,0:4:2.60:0,3,10	./.	0/0:23,0:22:53.51:0,54,378	1/1:3,1:4:1.82:5,2,0	0/1:2,0:2:3.62:4,0,4	0/0:2,1:3:0:0,0,0	0/1:1,2:3:11.98:23,0,12	0/1:3,1:4:0:0,0,0	1/1:0,1:1:3.01:44,3,0	0/1:1,1:2:0:0,0,0	./.	0/0:7,0:6:11.87:0,12,90	0/0:9,0:9:18.01:0,18,187	0/0:4,0:4:11.94:0,12,110	./.	0/0:4,0:4:2.99:0,3,23	./.	./.	./.	1/1:3,1:5:2.85:18,3,0	./.	0/0:3,1:3:8.33:0,8,45	1/1:1,1:3:6.02:72,6,0
chr10	30412581	.	C	CAT	303.31	PASS	AB=0.903;AC=18;AF=0.692;AN=26;BaseQRankSum=-1.067;DP=92;FS=3.407;HRun=0;HaplotypeScore=42.1587;InbreedingCoeff=-0.0317;MQ=35.77;MQ0=2;MQRankSum=0.380;QD=5.06;ReadPosRankSum=-1.103;VQSLOD=2.0694;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/1:2,0:1:0:0,0,0	./.	0/1:1,0:2:0:0,0,0	./.	./.	0/1:21,0:21:23.60:24,0,156	1/1:1,0:4:1.82:5,2,0	1/1:0,0:1:3.01:41,3,0	./.	1/1:2,1:3:5.60:44,6,0	0/1:2,2:4:0:0,0,0	0/1:1,0:1:0:0,0,0	./.	./.	0/1:5,0:5:9.14:9,0,18	0/1:7,1:8:2.28:102,0,2	0/1:4,0:4:26.22:26,0,28	./.	./.	./.	./.	./.	./.	./.	1/1:1,1:1:3.01:39,3,0	1/1:0,3:3:8.92:99,9,0
chr10	30412636	.	A	ATG	1578.48	PASS	AB=1.000;AC=33;AF=0.917;AN=36;BaseQRankSum=-1.893;DP=122;FS=5.951;HRun=0;HaplotypeScore=39.4792;InbreedingCoeff=0.0237;MQ=74.76;MQ0=5;MQRankSum=-0.979;QD=16.27;ReadPosRankSum=0.370;VQSLOD=2.0422;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	1/1:2,1:3:3.01:35,3,0	0/0:7,0:3:2.99:0,3,23	0/1:19,0:7:16.10:16,0,26	1/1:6,0:6:9.03:103,9,0	1/1:4,0:4:3.01:35,3,0	./.	1/1:14,9:23:57.03:828,57,0	1/1:3,0:3:3.01:35,3,0	1/1:3,0:3:9.02:116,9,0	./.	1/1:5,0:5:3.01:35,3,0	1/1:4,1:5:3.01:35,3,0	./.	1/1:3,0:3:3.01:35,3,0	1/1:4,0:4:3.01:33,3,0	1/1:2,2:4:3.01:53,3,0	1/1:0,3:3:3.01:53,3,0	1/1:3,0:2:5.97:46,6,0	./.	./.	./.	./.	./.	1/1:2,1:3:6.02:71,6,0	1/1:1,0:1:3.01:53,3,0	1/1:5,0:4:11.89:92,12,0	./.
chr10	30412650	.	GTA	G	292.50	PASS	AB=1.000;AC=23;AF=0.676;AN=34;BaseQRankSum=3.584;DP=124;FS=6.726;HRun=0;HaplotypeScore=40.6210;InbreedingCoeff=0.4236;MQ=52.54;MQ0=8;MQRankSum=3.841;QD=4.30;ReadPosRankSum=4.889;VQSLOD=0.4900;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	1/1:3,0:3:2.98:22,3,0	0/0:11,0:5:8.82:0,9,99	0/1:23,0:5:7.37:7,0,16	1/1:6,0:6:8.93:63,9,0	1/1:2,0:2:2.98:22,3,0	./.	0/0:22,0:21:51.81:0,52,575	1/1:1,1:2:2.98:22,3,0	1/1:3,0:3:8.76:76,9,0	./.	1/1:3,2:5:2.98:22,3,0	1/1:4,2:6:2.98:22,3,0	./.	1/1:3,0:3:2.98:22,3,0	1/1:3,1:4:2.97:20,3,0	0/0:4,0:4:3:0,3,25	0/0:3,0:3:6.02:0,6,80	0/0:1,0:1:3.01:0,3,49	./.	./.	./.	./.	./.	1/1:3,2:5:5.97:44,6,0	./.	1/1:5,1:5:12.27:75,12,0	./.
chr10	30412666	.	ATG	A	1765.40	PASS	AB=0.964;AC=31;AF=0.912;AN=34;BaseQRankSum=-0.991;DP=134;FS=5.067;HRun=0;HaplotypeScore=31.3723;InbreedingCoeff=0.1507;MQ=49.80;MQ0=7;MQRankSum=0.747;QD=17.48;ReadPosRankSum=2.699;VQSLOD=2.4714;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	1/1:0,4:4:3.01:46,3,0	0/0:16,0:8:8.64:0,9,128	0/1:26,0:3:6.34:6,0,9	1/1:0,5:5:9.03:138,9,0	1/1:0,1:1:3.01:46,3,0	./.	1/1:3,18:21:57.16:808,57,0	1/1:0,3:3:3.01:46,3,0	1/1:0,4:4:9.03:138,9,0	./.	1/1:0,5:5:3.01:46,3,0	1/1:0,5:5:3.01:46,3,0	./.	1/1:1,3:4:3.01:46,3,0	1/1:1,3:4:3.01:46,3,0	1/1:0,3:3:3.01:46,3,0	1/1:0,1:1:3.01:46,3,0	1/1:1,2:3:6.02:91,6,0	./.	./.	./.	./.	./.	1/1:0,5:5:6.02:92,6,0	./.	1/1:0,6:6:12.04:176,12,0	./.
chr10	30412718	.	GAGTA	G	1311.81	PASS	AC=22;AF=0.786;AN=28;BaseQRankSum=-2.908;DP=111;FS=6.067;HRun=0;HaplotypeScore=26.0700;InbreedingCoeff=0.4620;MQ=65.15;MQ0=3;MQRankSum=-1.911;QD=26.24;ReadPosRankSum=2.708;VQSLOD=2.2488;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:17,0:7:14.73:0,15,233	0/0:17,0:7:11.83:0,12,120	1/1:2,4:6:3.01:63,3,0	./.	./.	1/1:4,7:10:28.91:520,29,0	1/1:1,2:3:3.01:56,3,0	1/1:0,1:1:3.01:63,3,0	./.	1/1:2,3:5:3.01:63,3,0	./.	./.	./.	0/0:1,2:3:2.94:0,3,18	1/1:1,6:7:3.01:61,3,0	1/1:0,3:3:6.02:78,6,0	1/1:0,4:4:12.04:251,12,0	./.	./.	./.	./.	./.	./.	1/1:0,1:1:3.01:63,3,0	1/1:1,7:8:9.03:164,9,0	1/1:0,1:1:3.01:41,3,0
chr10	30412726	.	GTATATATATATATA	G	139.26	PASS	AC=4;AF=0.200;AN=20;BaseQRankSum=0.623;DP=107;FS=0.000;HRun=0;HaplotypeScore=38.9488;InbreedingCoeff=0.3370;MQ=56.32;MQ0=3;MQRankSum=-1.713;QD=13.93;ReadPosRankSum=1.246;VQSLOD=1.0036;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:15,0:6:0.89:0,1,2	0/0:13,0:5:3.01:0,3,42	./.	./.	./.	0/0:10,0:9:11.36:0,11,141	1/1:2,0:3:3.01:101,3,0	./.	0/0:1,1:2:0:0,0,0	./.	./.	./.	./.	0/0:3,0:3:2.94:0,3,18	0/0:10,0:10:3.01:0,3,62	0/0:5,0:5:1.70:0,2,36	0/0:4,0:4:5.93:0,6,93	./.	./.	./.	./.	./.	./.	./.	1/1:4,2:7:3.01:117,3,0	./.
chr10	30414659	.	AC	A	17682.10	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-2.174;DP=654;FS=10.182;HRun=6;HaplotypeScore=67.8071;InbreedingCoeff=0.9987;MQ=85.54;MQ0=0;MQRankSum=-9.162;QD=29.08;ReadPosRankSum=7.180;VQSLOD=4.2311;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,29:30:81.20:871,81,0	1/1:1,7:8:24.06:258,24,0	0/0:29,0:29:78.25:0,78,1009	0/0:17,0:17:42.07:0,42,511	1/1:1,26:27:72.18:774,72,0	1/1:1,23:24:66.17:709,66,0	1/1:1,18:19:48.12:516,48,0	1/1:4,26:30:78.18:829,78,0	1/1:0,19:19:54.14:580,54,0	1/1:2,22:24:63.01:677,63,0	1/1:3,22:25:63.15:672,63,0	1/1:1,23:24:69.17:742,69,0	1/1:0,22:22:63.16:677,63,0	1/1:3,24:27:66.16:709,66,0	1/1:2,33:35:93.23:999,93,0	1/1:2,28:30:75.19:806,75,0	1/1:0,27:27:75.19:806,75,0	1/1:0,23:23:69.17:742,69,0	1/1:3,24:27:69.01:749,69,0	1/1:3,28:31:81.20:871,81,0	1/1:1,15:16:39.10:419,39,0	1/1:0,15:15:39.10:419,39,0	1/1:1,25:26:75.19:806,75,0	1/1:1,17:18:48.12:516,48,0	1/1:0,19:19:57.14:613,57,0	1/1:0,26:26:78.17:826,78,0	1/1:2,23:25:69.17:742,69,0	1/1:0,11:11:33.08:355,33,0
chr10	30416819	.	G	GT	19614.40	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-0.076;DP=635;FS=1.222;HRun=1;HaplotypeScore=103.6273;InbreedingCoeff=0.9434;MQ=75.84;MQ0=14;MQRankSum=-6.533;QD=33.88;ReadPosRankSum=8.887;VQSLOD=3.6295;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,43:43:96.25:1316,96,0	1/1:2,6:8:17.95:226,18,0	0/0:27,0:26:68.60:0,69,823	0/0:28,0:25:68.95:0,69,818	1/1:4,12:16:35.82:425,36,0	1/1:0,18:18:45.15:628,45,0	1/1:1,22:22:45.04:593,45,0	1/1:0,20:20:60.06:766,60,0	1/1:0,25:25:66.22:922,66,0	1/1:1,32:31:90.21:1179,90,0	1/1:0,11:11:24.08:334,24,0	1/1:2,31:31:87.25:1198,87,0	1/1:0,16:15:39.13:547,39,0	1/1:0,27:27:69.23:956,69,0	1/1:0,23:23:60.20:837,60,0	1/1:0,18:18:39.13:541,39,0	1/1:1,35:34:84.28:1173,84,0	1/1:0,24:24:69.23:969,69,0	1/1:1,13:13:39.01:480,39,0	1/1:1,16:17:39.13:535,39,0	1/1:0,36:35:81.27:1134,81,0	1/1:1,17:18:45.04:602,45,0	1/1:0,25:24:57.19:801,57,0	1/1:0,28:28:72.24:1006,72,0	1/1:0,13:12:36.12:501,36,0	1/1:0,29:29:87.29:1211,87,0	1/1:1,20:21:48.12:651,48,0	1/1:0,2:2:6.02:84,6,0
chr10	30420953	.	C	CGTGTGT	9794.53	PASS	AB=1.000;AC=42;AF=0.750;AN=56;BaseQRankSum=-2.577;DP=757;FS=12.419;HRun=0;HaplotypeScore=193.4250;InbreedingCoeff=0.6441;MQ=65.56;MQ0=1;MQRankSum=-9.273;QD=17.68;ReadPosRankSum=-1.684;VQSLOD=3.3077;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:37,1:49:6.49:137,6,0	1/1:9,6:17:11:322,11,0	0/0:33,0:27:2.92:0,3,32	0/0:28,0:18:6.02:0,6,117	1/1:18,7:30:17.68:451,18,0	1/1:21,8:35:24.55:643,25,0	1/1:17,5:25:23.89:610,24,0	0/0:37,0:37:20.83:0,21,391	1/1:12,4:19:8.68:285,9,0	1/1:14,4:20:21.91:498,22,0	1/1:10,0:13:6.02:121,6,0	1/1:19,7:30:14.72:411,15,0	1/1:11,11:25:15.05:429,15,0	1/1:7,14:26:30.10:917,30,0	1/1:13,6:20:12.04:391,12,0	1/1:11,9:23:27.09:846,27,0	0/1:21,0:21:21.42:21,0,710	0/1:14,0:14:45.10:45,0,250	0/0:24,0:25:22.61:0,23,423	0/0:32,0:32:39.13:0,39,755	0/0:41,0:46:67.04:0,67,1175	1/1:20,9:32:18.06:565,18,0	1/1:9,3:14:5.52:195,6,0	1/1:13,9:29:26.29:623,26,0	1/1:19,8:32:26.80:779,27,0	1/1:25,2:32:39.98:845,40,0	1/1:24,10:35:16.22:569,16,0	1/1:10,0:10:3.01:89,3,0
chr10	30422029	.	A	AT	17642.83	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-7.630;DP=636;FS=4.902;HRun=8;HaplotypeScore=59.3136;InbreedingCoeff=0.8853;MQ=81.89;MQ0=0;MQRankSum=-8.259;QD=29.31;ReadPosRankSum=4.949;VQSLOD=4.8377;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,29:30:87.26:1004,87,0	1/1:1,4:5:9.03:104,9,0	0/0:19,0:19:39.93:0,40,358	0/0:15,0:15:28.03:0,28,223	1/1:5,28:33:81.20:920,81,0	1/1:0,20:20:60.18:692,60,0	1/1:4,18:23:57:638,57,0	1/1:10,28:38:84.22:948,84,0	1/1:0,21:21:54.16:623,54,0	1/1:5,33:38:99:1112,99,0	1/1:0,24:24:69.16:782,69,0	1/1:4,23:27:72.21:826,72,0	1/1:8,21:30:69.04:772,69,0	1/1:3,17:20:48.14:550,48,0	1/1:3,23:26:72.21:827,72,0	1/1:2,29:31:87.26:1004,87,0	1/1:1,28:29:84.25:969,84,0	1/1:3,10:13:30.09:346,30,0	1/1:5,9:14:2.62:284,3,0	1/1:5,17:22:48.10:539,48,0	1/1:1,17:18:48.14:554,48,0	1/1:0,20:20:55.05:625,55,0	1/1:2,16:18:48.10:539,48,0	1/1:1,16:17:42.12:485,42,0	1/1:4,25:29:69.20:789,69,0	1/1:3,25:28:75.19:845,75,0	1/1:1,18:20:53.74:588,54,0	1/1:0,8:8:24.07:277,24,0
chr10	30427374	.	CATAG	C	3881.14	PASS	AB=0.864;AC=35;AF=0.729;AN=48;BaseQRankSum=3.421;DP=682;FS=0.000;HRun=0;HaplotypeScore=140.6479;InbreedingCoeff=0.5854;MQ=63.07;MQ0=7;MQRankSum=1.310;QD=8.46;ReadPosRankSum=1.891;VQSLOD=2.9200;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:27:3.46:26,3,0	1/1:5,5:10:5.70:93,6,0	./.	./.	0/1:9,20:29:0.89:257,0,1	1/1:13,11:24:15.05:232,15,0	./.	0/0:45,0:42:9.38:0,9,62	1/1:9,11:20:12.04:186,12,0	1/1:11,15:25:24.42:555,24,0	1/1:15,22:35:21.07:325,21,0	./.	1/1:13,14:27:12.04:186,12,0	1/1:26,3:27:6.02:93,6,0	0/0:32,0:30:54.19:0,54,1224	0/0:33,0:32:48.16:0,48,1001	1/1:28,0:27:9.02:97,9,0	0/1:20,0:24:9.12:9,0,32	0/0:16,0:16:18.06:0,18,378	0/1:32,0:32:4.28:154,0,4	1/1:15,0:14:5.49:24,5,0	1/1:10,13:22:15.05:232,15,0	1/1:27,5:31:24.07:330,24,0	1/1:17,9:26:5.99:93,6,0	0/0:34,0:33:25.18:0,25,992	1/1:10,17:27:51.16:756,51,0	1/1:8,11:18:12.04:186,12,0	1/1:2,1:3:3.01:46,3,0
chr10	30427410	.	G	GATAGATAC	5974.98	PASS	AB=1.000;AC=36;AF=0.692;AN=52;BaseQRankSum=5.354;DP=755;FS=3.820;HRun=0;HaplotypeScore=190.4862;InbreedingCoeff=0.3970;MQ=44.45;MQ0=31;MQRankSum=0.061;QD=10.34;ReadPosRankSum=0.603;VQSLOD=3.6895;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:9,12:18:2.98:23,3,0	1/1:11,0:10:6.02:118,6,0	./.	./.	1/1:39,0:36:6.77:366,7,0	1/1:22,0:21:19.76:285,20,0	0/1:16,0:15:0.04:1,0,0	0/0:55,0:46:51.27:0,51,333	1/1:27,0:26:12.04:222,12,0	1/1:39,0:38:99:1385,109,0	1/1:41,0:40:21.07:349,21,0	0/0:0,22:24:0:0,0,0	1/1:33,0:31:20.05:297,20,0	1/1:27,0:24:5.84:93,6,0	0/0:37,0:35:53.98:0,54,898	0/0:43,0:41:23.07:0,23,720	1/1:25,0:23:9.02:119,9,0	0/1:29,0:25:38.32:38,0,42	0/0:18,0:16:41.82:0,42,546	0/1:28,0:28:25.12:176,0,25	0/1:18,0:10:12.25:12,0,37	1/1:27,0:25:18.05:258,18,0	1/1:29,0:26:27.06:354,27,0	0/1:21,0:19:12.52:84,0,13	0/1:38,0:35:18.98:19,0,759	1/1:32,0:32:88.75:1176,89,0	1/1:40,0:36:37.27:437,37,0	1/1:11,0:11:17.86:163,18,0
chr10	30427416	.	T	TACATAGAT	5975.08	PASS	AB=1.000;AC=36;AF=0.692;AN=52;BaseQRankSum=5.645;DP=754;FS=3.056;HRun=0;HaplotypeScore=193.3497;InbreedingCoeff=0.3965;MQ=44.23;MQ0=32;MQRankSum=1.943;QD=10.37;ReadPosRankSum=1.226;VQSLOD=3.8675;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:17:2.90:23,3,0	1/1:10,0:9:6.02:118,6,0	./.	./.	1/1:41,0:36:6.77:366,7,0	1/1:22,0:21:18.52:282,19,0	0/1:16,0:15:0.04:1,0,0	0/0:53,0:45:48.30:0,48,314	1/1:24,0:23:12.04:222,12,0	1/1:41,0:39:99:1385,109,0	1/1:41,0:40:21.07:349,21,0	0/0:24,0:24:0:0,0,0	1/1:35,0:33:20.05:297,20,0	1/1:11,11:21:5.84:93,6,0	0/0:39,0:37:53.98:0,54,898	0/0:42,0:40:23.07:0,23,720	1/1:24,0:22:9.02:119,9,0	0/1:30,0:26:31.78:41,0,32	0/0:20,0:16:41.82:0,42,546	0/1:28,0:28:25.12:176,0,25	0/1:18,0:10:12.25:12,0,37	1/1:27,0:24:18.05:258,18,0	1/1:29,0:26:27.06:354,27,0	0/1:21,0:19:12.52:84,0,13	0/1:36,0:33:18.98:19,0,759	1/1:33,0:33:88.75:1176,89,0	1/1:44,0:40:37.27:437,37,0	1/1:11,0:11:17.86:163,18,0
chr10	30427418	.	GATAC	G	1870.94	PASS	AB=0.974;AC=22;AF=0.423;AN=52;BaseQRankSum=2.458;DP=757;FS=1.984;HRun=0;HaplotypeScore=177.5065;InbreedingCoeff=-0.3069;MQ=44.09;MQ0=35;MQRankSum=4.839;QD=3.27;ReadPosRankSum=3.907;VQSLOD=2.5895;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:17:5.87:0,6,68	0/1:10,0:9:32.09:32,0,33	./.	./.	0/1:42,0:37:69.86:102,0,70	0/1:23,0:22:78.70:79,0,87	0/1:15,0:14:0.31:0,0,0	0/1:50,0:43:14.29:14,0,514	0/1:24,0:23:10.01:85,0,10	0/1:43,0:40:99:153,0,484	0/1:42,0:41:22.10:125,0,22	0/0:24,0:24:5.99:0,6,49	0/1:35,0:33:51.31:51,0,140	0/1:23,0:20:31.34:31,0,37	0/0:39,0:37:63.13:0,63,1320	0/0:42,0:40:61.88:0,62,1011	1/1:11,13:22:12:190,12,0	0/1:29,2:27:89.24:99,0,89	0/0:23,0:17:50.25:0,50,582	0/1:21,6:27:32.70:409,0,33	0/1:13,5:10:33.60:34,0,60	0/1:27,0:24:7.07:90,0,7	0/1:29,0:26:0.25:118,0,0	1/1:20,0:18:8.96:67,9,0	0/0:36,0:33:53.78:0,54,1128	0/1:34,0:34:99:305,0,272	0/1:44,0:40:37.55:38,0,280	0/1:11,0:11:0.58:1,0,120
chr10	30428533	.	C	CT	18069.99	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-5.329;DP=687;FS=1.849;HRun=4;HaplotypeScore=86.2281;InbreedingCoeff=0.9970;MQ=82.53;MQ0=0;MQRankSum=-6.383;QD=36.80;ReadPosRankSum=6.621;VQSLOD=4.1082;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,30:34:84.28:1145,84,0	1/1:1,8:9:24.08:328,24,0	0/0:23,0:23:43.15:0,43,660	0/0:22,0:22:60.14:0,60,655	1/1:2,32:34:93.31:1272,93,0	1/1:1,25:26:72.24:985,72,0	1/1:1,27:29:72.24:985,72,0	0/0:41,0:41:99:0,105,1190	1/1:1,21:22:60.20:821,60,0	1/1:1,16:17:45.15:616,45,0	1/1:0,17:17:51.10:674,51,0	1/1:1,24:25:63.21:862,63,0	1/1:1,28:29:78.22:1043,78,0	1/1:2,24:26:63.21:862,63,0	1/1:3,30:32:84.28:1149,84,0	1/1:4,23:27:69.23:944,69,0	0/0:29,0:29:84.24:0,84,952	0/0:21,0:21:60.15:0,60,668	0/0:13,0:13:36.10:0,36,408	0/0:18,0:18:54.14:0,54,602	0/0:29,0:29:78.22:0,78,884	1/1:1,19:20:60.20:820,60,0	1/1:1,21:22:63.21:862,63,0	1/1:1,28:29:84.28:1149,84,0	1/1:1,18:19:54.18:739,54,0	1/1:1,28:29:84.27:1132,84,0	1/1:0,38:38:99:1477,108,0	1/1:1,5:6:15.05:205,15,0
chr10	30429964	.	TACACACACACACAC	T	5833.34	PASS	AB=0.613;AC=35;AF=0.700;AN=50;BaseQRankSum=5.193;DP=591;FS=0.000;HRun=0;HaplotypeScore=198.3412;InbreedingCoeff=0.6840;MQ=50.39;MQ0=12;MQRankSum=-4.670;QD=16.07;ReadPosRankSum=2.704;VQSLOD=3.3564;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:14,17:31:3.27:0,3,13	1/1:9,0:9:8.22:97,8,0	./.	./.	./.	1/1:9,15:24:5.95:235,6,0	1/1:14,9:22:6.02:197,6,0	0/0:30,0:25:26.99:0,27,355	1/1:13,11:24:20.62:715,21,0	1/1:15,4:19:9.01:234,9,0	1/1:11,0:14:8.93:176,9,0	1/1:16,16:34:21.50:608,21,0	1/1:6,13:19:14.60:501,15,0	1/1:11,10:23:17.08:442,17,0	1/1:6,12:20:14.02:525,14,0	0/1:7,11:19:5.21:883,0,5	0/0:9,0:18:6.49:0,6,182	0/0:19,0:20:25.24:0,25,630	0/0:18,0:20:40.10:0,40,855	0/0:13,0:14:21.94:0,22,536	0/0:31,0:30:33.08:0,33,782	1/1:10,13:23:6.39:197,6,0	1/1:18,14:31:6.13:117,6,0	1/1:15,9:23:6.45:135,6,0	1/1:7,10:17:5.65:172,6,0	1/1:12,0:12:9:164,9,0	1/1:15,6:22:8.70:315,9,0	1/1:1,2:3:3.01:118,3,0
chr10	30430719	.	T	TTC	31017.10	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-10.775;DP=645;FS=3.427;HRun=0;HaplotypeScore=70.2020;InbreedingCoeff=0.9876;MQ=90.57;MQ0=0;MQRankSum=-12.090;QD=52.57;ReadPosRankSum=6.204;VQSLOD=5.6732;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,52:55:99:2924,144,0	1/1:0,8:8:20.95:426,21,0	0/0:25,0:25:74.99:0,75,1064	0/0:30,0:30:70.08:0,70,1246	1/1:0,17:18:48.08:882,48,0	1/1:1,17:18:54.19:1095,54,0	1/1:0,38:38:99:2193,108,0	1/1:3,21:25:66.21:1280,66,0	1/1:0,20:20:51.18:1034,51,0	1/1:0,18:19:55.06:1063,55,0	1/1:0,11:11:30.10:608,30,0	1/1:0,29:30:75.26:1522,75,0	1/1:0,36:35:93.32:1887,93,0	1/1:0,28:31:75.26:1522,75,0	1/1:1,26:27:63.22:1277,63,0	1/1:0,21:21:48.16:974,48,0	1/1:1,25:26:69.24:1377,69,0	1/1:0,11:12:33.11:670,33,0	1/1:1,8:10:30.10:609,30,0	1/1:1,12:13:36.12:731,36,0	1/1:2,51:54:99:2743,136,0	1/1:0,7:10:24.04:444,24,0	1/1:0,13:16:30.03:609,30,0	1/1:0,33:35:96.33:1950,96,0	1/1:0,13:13:33.11:670,33,0	1/1:0,20:20:60.20:1190,60,0	1/1:0,19:19:51.18:1034,51,0	1/1:0,5:5:15.05:304,15,0
chr10	30430837	.	G	GCA	2247.57	PASS	AC=12;AF=0.222;AN=54;BaseQRankSum=-2.013;DP=390;FS=17.024;HRun=0;HaplotypeScore=80.9510;InbreedingCoeff=0.8889;MQ=68.39;MQ0=7;MQRankSum=-1.176;QD=24.97;ReadPosRankSum=-0.303;VQSLOD=3.2486;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:33.30:0,33,439	0/0:8,0:7:11.38:0,11,144	0/0:10,0:8:11:0,11,95	0/0:19,0:12:4.60:0,5,84	0/0:7,0:7:17.71:0,18,179	0/0:7,0:7:13.58:0,14,161	0/0:18,0:16:36.05:0,36,433	1/1:4,11:15:35.05:386,35,0	0/0:15,0:15:30.01:0,30,354	0/0:10,0:10:21.28:0,21,321	0/0:5,0:5:12.01:0,12,139	0/0:18,0:18:44.74:0,45,509	0/0:14,0:13:24.02:0,24,282	0/0:19,0:19:19.77:0,20,192	0/0:15,0:15:23.87:0,24,225	0/0:11,0:10:8.25:0,8,131	1/1:9,2:9:12.57:225,13,0	1/1:10,6:14:39.07:581,39,0	1/1:1,11:12:33.06:463,33,0	1/1:1,6:7:3.41:56,3,0	1/1:24,5:27:51.11:712,51,0	0/0:17,0:17:44.92:0,45,539	0/0:12,0:12:22.87:0,23,292	0/0:21,0:21:39.50:0,40,463	0/0:12,0:12:26.96:0,27,294	0/0:19,0:19:47.86:0,48,497	0/0:9,0:9:21.05:0,21,268	./.
chr10	30430843	.	G	GCACA	2291.39	PASS	AB=0.856;AC=34;AF=0.773;AN=44;BaseQRankSum=-1.533;DP=351;FS=1.505;HRun=0;HaplotypeScore=87.7723;InbreedingCoeff=-0.3268;MQ=60.66;MQ0=11;MQRankSum=0.533;QD=7.56;ReadPosRankSum=2.337;VQSLOD=2.0928;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:30,2:32:28.59:187,0,29	1/1:7,0:6:2.90:16,3,0	./.	./.	1/1:3,2:5:8.77:155,9,0	1/1:8,0:7:6.23:51,6,0	0/1:13,2:13:22.57:65,0,23	0/1:14,0:13:6.63:7,0,62	1/1:8,6:16:6.02:143,6,0	1/1:9,0:13:12.03:173,12,0	./.	0/1:11,6:17:24.36:270,0,24	1/1:11,0:10:3.01:71,3,0	0/1:7,9:18:9.75:134,0,10	1/1:5,7:13:9.03:214,9,0	1/1:3,4:8:6.23:85,6,0	0/1:9,0:9:16.34:83,0,16	0/1:12,0:12:4.07:145,0,4	0/1:8,0:8:23.16:47,0,23	1/1:4,0:7:3.48:57,3,0	0/1:28,0:25:39.60:40,0,60	./.	1/1:7,2:11:2.74:12,3,0	1/1:15,4:19:14.80:241,15,0	0/1:7,4:11:23.07:65,0,23	1/1:13,0:13:14.80:156,15,0	./.	./.
chr10	30430911	.	GAGAGAGAGAGAGA	G	390.29	PASS	AB=1.000;AC=15;AF=0.469;AN=32;BaseQRankSum=1.732;DP=152;FS=0.000;HRun=0;HaplotypeScore=28.6504;InbreedingCoeff=0.4479;MQ=20.65;MQ0=48;MQRankSum=0.276;QD=10.55;ReadPosRankSum=0.427;VQSLOD=0.9176;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:6,6:7:3.84:21,4,0	0/0:1,0:1:3.01:0,3,35	0/0:26,0:3:9.03:0,9,113	0/0:46,0:10:21.98:0,22,241	0/0:3,0:2:0.47:0,0,1	1/1:2,2:4:3:73,3,0	0/1:7,0:4:0.40:0,0,0	./.	1/1:0,1:1:3.01:120,3,0	0/0:4,0:3:5.99:0,6,57	./.	0/0:3,0:2:0:0,0,0	./.	./.	./.	./.	./.	0/0:3,0:1:3.01:0,3,72	./.	./.	./.	1/1:3,4:5:5.91:38,6,0	./.	1/1:3,0:2:1.77:12,2,0	1/1:1,1:2:6:133,6,0	1/1:1,0:1:3.01:101,3,0	0/0:3,0:1:2.22:0,2,7	./.
chr10	30430991	.	GAGAC	G	5953.88	PASS	AB=0.938;AC=41;AF=0.732;AN=56;BaseQRankSum=7.770;DP=368;FS=0.785;HRun=0;HaplotypeScore=68.2255;InbreedingCoeff=0.8230;MQ=82.82;MQ0=14;MQRankSum=2.194;QD=28.90;ReadPosRankSum=3.680;VQSLOD=4.7546;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,11:15:21.07:337,21,0	1/1:0,3:3:9.03:145,9,0	0/0:37,0:19:6.02:0,6,130	0/0:74,0:43:24.05:0,24,475	1/1:4,6:10:18.06:289,18,0	1/1:1,4:5:6.02:96,6,0	1/1:4,14:19:24.07:365,24,0	0/0:13,0:13:12.04:0,12,268	1/1:1,11:12:27.09:419,27,0	1/1:0,9:9:27.05:405,27,0	1/1:2,6:7:15.05:241,15,0	1/1:2,6:8:18.06:289,18,0	1/1:0,9:9:21.07:337,21,0	1/1:1,12:13:33.11:530,33,0	1/1:0,12:13:30.10:461,30,0	1/1:1,9:10:24.08:385,24,0	0/0:8,0:8:21.07:0,21,505	0/0:7,0:7:21.07:0,21,504	0/0:7,0:7:15.05:0,15,329	0/0:13,0:13:30.10:0,30,706	0/1:14,1:14:9.04:9,0,827	1/1:3,5:8:15.05:235,15,0	1/1:0,6:6:9.03:144,9,0	1/1:1,11:13:21.07:337,21,0	1/1:1,6:7:8.99:116,9,0	1/1:1,8:9:24.08:379,24,0	1/1:1,7:8:18.06:289,18,0	1/1:0,6:6:9.03:145,9,0
chr10	30431968	.	GT	G	2401.21	PASS	AB=0.920;AC=14;AF=0.250;AN=56;BaseQRankSum=8.141;DP=660;FS=0.777;HRun=11;HaplotypeScore=69.8552;InbreedingCoeff=0.8396;MQ=75.12;MQ0=2;MQRankSum=1.834;QD=12.07;ReadPosRankSum=-0.480;VQSLOD=3.2815;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,2:31:40.75:0,41,810	0/1:10,2:13:10.36:10,0,287	0/1:35,1:24:0.27:0,0,241	0/0:25,2:21:7.69:0,8,210	0/0:39,2:41:77.62:0,78,1029	0/0:26,1:27:29.49:0,29,518	0/0:23,0:23:37.14:0,37,563	1/1:11,25:37:77.22:605,77,0	0/0:10,0:10:24.06:0,24,256	0/0:27,2:30:44.40:0,44,656	0/0:23,0:23:54.10:0,54,553	0/0:22,0:22:51.13:0,51,544	0/0:25,0:25:69.17:0,69,733	0/0:12,1:13:11.43:0,11,319	0/0:19,0:19:42.10:0,42,442	0/0:17,1:18:23.48:0,23,452	1/1:3,25:29:55.97:449,56,0	1/1:1,13:15:35:277,35,0	1/1:9,27:36:77.87:635,78,0	1/1:3,15:18:41.92:342,42,0	1/1:4,11:15:32.96:271,33,0	0/0:22,0:22:39.09:0,39,408	0/0:15,0:15:36.56:0,37,385	0/0:21,0:22:61.69:0,62,596	0/0:20,0:22:31.64:0,32,488	0/0:25,2:28:30.72:0,31,609	0/0:29,0:30:80.94:0,81,813	0/0:12,0:13:35.91:0,36,357
chr10	30433339	.	TCATCACCACCACCACCACCACCAC	T	3719.47	PASS	AB=0.979;AC=22;AF=0.423;AN=52;BaseQRankSum=-4.948;DP=801;FS=17.004;HRun=0;HaplotypeScore=221.7556;InbreedingCoeff=-0.3297;MQ=29.61;MQ0=148;MQRankSum=2.962;QD=6.51;ReadPosRankSum=-3.630;VQSLOD=0.9272;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:19:56.37:56,0,147	0/0:14,8:15:10.80:0,11,137	./.	./.	1/1:18,0:13:4.98:344,5,0	0/1:29,1:16:16.01:28,0,16	0/1:68,0:44:99:277,0,167	0/0:52,0:7:17.88:0,18,132	0/1:30,0:21:76.30:139,0,76	0/1:39,0:27:99:748,0,485	0/1:13,0:10:0.88:251,0,1	0/1:47,1:43:99:199,0,206	0/1:30,1:24:84.96:234,0,85	0/1:41,0:33:99:311,0,140	0/1:32,1:26:99:184,0,124	0/1:24,2:20:31.17:31,0,138	0/0:28,0:21:44.50:0,45,415	0/1:14,0:11:99:125,0,199	0/0:22,0:8:14.27:0,14,99	0/0:18,0:10:4.62:0,5,39	0/0:78,0:42:18.55:0,19,178	1/1:24,0:17:1.36:146,1,0	0/1:15,0:10:20.24:56,0,20	0/1:44,0:37:99:203,0,112	0/1:27,3:20:76.90:209,0,77	0/1:25,0:16:44.14:44,0,175	1/1:11,0:8:11.96:132,12,0	0/0:3,7:9:3:0,3,48
chr10	30433342	.	TCACCACCACCACCACCACCAC	T	1084.62	PASS	AB=1.000;AC=19;AF=0.413;AN=46;BaseQRankSum=-0.440;DP=777;FS=10.124;HRun=0;HaplotypeScore=200.2831;InbreedingCoeff=-0.0597;MQ=28.82;MQ0=148;MQRankSum=0.038;QD=2.91;ReadPosRankSum=-2.239;VQSLOD=1.7387;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:19:8.24:0,8,132	0/0:22,0:15:8.02:0,8,110	./.	./.	1/1:17,0:12:9.03:174,9,0	0/0:31,0:17:2.88:0,3,15	0/0:65,0:42:12.46:0,12,186	./.	0/0:31,0:21:8.14:0,8,108	0/1:38,0:26:99:421,0,446	1/1:12,0:9:8.02:125,8,0	0/1:48,0:43:46.88:47,0,196	0/1:30,0:23:80.87:81,0,138	0/1:42,0:33:99:100,0,135	0/1:31,0:24:37.47:37,0,135	0/0:23,0:16:1:0,1,93	0/1:27,0:20:6.20:6,0,61	0/1:15,0:11:73.16:158,0,73	./.	1/1:12,5:9:1.25:3,1,0	./.	0/0:23,0:15:3.22:0,3,13	1/1:14,0:9:2.78:25,3,0	0/1:44,0:38:15.32:15,0,124	0/1:27,0:17:9.23:9,0,124	0/0:24,0:15:9.99:0,10,169	1/1:10,0:7:4.20:22,4,0	0/0:9,0:8:3.01:0,3,49
chr10	30433402	.	TCATCACCAC	T	5837.28	PASS	AB=0.878;AC=34;AF=0.680;AN=50;BaseQRankSum=-4.589;DP=637;FS=1.676;HRun=0;HaplotypeScore=145.1170;InbreedingCoeff=-0.0634;MQ=26.24;MQ0=103;MQRankSum=3.612;QD=10.81;ReadPosRankSum=-3.112;VQSLOD=2.7135;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:18,2:18:35.68:36,0,66	1/1:9,1:8:3.48:37,3,0	./.	./.	1/1:10,0:8:6.02:92,6,0	1/1:28,2:17:10.17:144,10,0	0/1:59,2:38:19.66:124,0,20	0/1:33,11:15:11.09:406,0,11	1/1:18,2:16:10.50:179,10,0	0/1:22,1:13:93.95:94,0,186	0/1:4,2:4:0.01:0,0,0	0/1:32,7:33:61.33:872,0,61	1/1:26,2:23:44.61:643,45,0	1/1:20,7:24:14.64:466,15,0	1/1:27,1:22:14.68:211,15,0	1/1:25,2:17:10.34:425,10,0	0/1:22,2:20:25.99:492,0,26	0/1:19,1:18:74.23:317,0,74	1/1:15,6:7:1.06:330,1,0	0/0:7,1:7:0:0,0,1	0/0:68,0:29:2.80:0,3,14	1/1:15,2:13:3:50,3,0	./.	1/1:32,2:25:15.68:237,16,0	1/1:19,2:12:18.09:256,18,0	0/1:12,4:9:7.67:114,0,8	0/1:12,2:13:40.88:314,0,41	0/0:7,0:7:8.65:0,9,70
chr10	30433481	.	CACT	C	2359.72	PASS	AB=0.962;AC=28;AF=0.500;AN=56;BaseQRankSum=-3.721;DP=699;FS=2.254;HRun=0;HaplotypeScore=217.6447;InbreedingCoeff=-0.2739;MQ=38.39;MQ0=45;MQRankSum=1.018;QD=4.24;ReadPosRankSum=-8.311;VQSLOD=-0.1627;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:16,1:16:16.84:17,0,41	0/0:6,1:7:8.59:0,9,43	0/0:56,0:13:34.28:0,34,470	0/0:61,0:16:44.06:0,44,714	0/1:14,0:12:11.70:41,0,12	0/1:23,1:21:38.05:59,0,38	0/1:43,0:27:13.03:94,0,13	1/1:22,0:16:38.15:302,38,0	0/1:24,1:22:41.52:133,0,42	0/1:17,1:18:16.19:123,0,16	0/0:12,1:13:7.10:0,7,46	0/1:41,2:42:61.44:269,0,61	0/1:34,3:37:99:240,0,154	0/1:21,2:22:24.24:24,0,117	0/1:32,1:33:99:135,0,102	0/1:25,2:25:41.06:134,0,41	1/1:25,0:24:15.90:207,16,0	0/1:16,0:14:2.20:111,0,2	0/1:11,1:9:6.28:111,0,6	1/1:15,1:14:11.16:72,11,0	1/1:45,0:33:9.81:73,10,0	0/1:10,1:9:11.41:11,0,51	0/1:11,0:10:9.43:9,0,37	0/1:32,0:29:69.65:70,0,75	1/1:21,1:18:12.44:130,12,0	0/1:21,1:19:26.72:107,0,27	0/1:19,0:19:58.07:58,0,66	0/0:5,0:5:6.32:0,6,53
chr10	30433543	.	TCAC	T	7151.35	PASS	AB=0.980;AC=41;AF=0.732;AN=56;BaseQRankSum=3.032;DP=783;FS=2.261;HRun=0;HaplotypeScore=179.1149;InbreedingCoeff=0.6741;MQ=37.44;MQ0=79;MQRankSum=2.715;QD=11.90;ReadPosRankSum=3.462;VQSLOD=4.7150;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:32,3:29:24.49:509,24,0	1/1:8,1:9:12.75:171,13,0	0/0:12,0:3:5.95:0,6,42	0/0:22,0:2:2.97:0,3,20	1/1:17,3:16:1.01:233,1,0	1/1:24,4:22:44.48:489,44,0	1/1:40,2:29:27.21:333,27,0	0/0:39,0:13:35.81:0,36,283	1/1:22,6:27:34.93:508,35,0	1/1:9,27:31:69.21:623,69,0	1/1:14,3:12:20.77:193,21,0	1/1:33,5:38:60.53:604,61,0	1/1:20,2:17:42.08:387,42,0	1/1:28,3:29:33.19:423,33,0	1/1:26,2:24:35.59:332,36,0	1/1:22,3:19:5.18:262,5,0	0/1:28,0:27:1.93:2,0,221	0/0:20,0:20:9.97:0,10,224	0/1:27,0:8:0.41:0,0,74	0/0:21,0:13:8.78:0,9,69	0/0:66,0:38:28.25:0,28,214	1/1:22,4:25:46.57:488,47,0	1/1:16,1:16:22.32:203,22,0	1/1:7,27:33:15.51:174,16,0	1/1:28,5:28:39.12:449,39,0	0/1:29,2:26:99:374,0,139	1/1:6,19:24:23.07:273,23,0	1/1:6,0:6:12:123,12,0
chr10	30437569	.	C	CTCCTCT	4606.12	PASS	AB=1.000;AC=29;AF=0.537;AN=54;BaseQRankSum=3.684;DP=680;FS=9.048;HRun=0;HaplotypeScore=173.8276;InbreedingCoeff=-0.4086;MQ=68.87;MQ0=7;MQRankSum=-8.227;QD=7.43;ReadPosRankSum=-10.734;VQSLOD=-0.1317;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:38,0:38:99:286,0,157	0/0:10,0:10:11.96:0,12,97	./.	0/1:25,0:19:0.09:0,0,0	0/1:21,0:21:58.21:58,0,61	0/1:25,0:25:99:121,0,183	0/1:35,0:35:99:146,0,221	1/1:30,0:28:13.18:93,13,0	0/1:15,0:15:82.16:82,0,100	0/1:22,0:22:99:115,0,260	0/0:11,0:11:20.89:0,21,161	0/1:36,0:36:99:406,0,285	0/1:28,0:28:99:266,0,213	0/1:30,0:30:99:363,0,158	0/1:22,0:22:62.99:63,0,241	0/1:34,0:34:99:402,0,140	1/1:12,11:25:9.03:289,9,0	0/1:19,0:19:8.60:495,0,9	1/1:10,5:12:15:265,15,0	1/1:18,13:36:29.52:389,30,0	1/1:16,11:27:0.47:1,0,0	0/1:16,0:16:82.43:136,0,82	0/1:19,0:19:80.98:81,0,127	0/1:32,0:32:14.05:14,0,261	0/1:23,0:23:99:175,0,137	0/1:22,0:22:80.85:81,0,124	0/1:22,0:22:99:276,0,119	0/0:14,0:13:5.99:0,6,49
chr10	30437589	.	C	CCTCTT	11887.89	PASS	AB=1.000;AC=44;AF=0.786;AN=56;BaseQRankSum=8.829;DP=692;FS=0.434;HRun=0;HaplotypeScore=138.9499;InbreedingCoeff=0.5456;MQ=56.36;MQ0=13;MQRankSum=-0.616;QD=19.71;ReadPosRankSum=8.959;VQSLOD=3.7435;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,25:39:44.67:677,45,0	1/1:9,0:9:26.43:252,26,0	0/0:16,0:8:9.03:0,9,135	0/0:18,0:11:17.15:0,17,227	1/1:9,9:19:38.53:494,39,0	1/1:12,16:28:37.48:443,37,0	1/1:31,0:31:63.93:847,64,0	0/0:28,0:24:58.65:0,59,689	1/1:5,8:13:20.21:254,20,0	1/1:17,12:29:74.46:824,74,0	1/1:9,7:16:32.02:221,32,0	1/1:20,21:43:75.35:1077,75,0	1/1:15,13:28:52.37:728,52,0	1/1:12,21:33:49.79:865,50,0	1/1:14,10:25:46.13:406,46,0	1/1:13,25:37:49.77:871,50,0	0/1:25,0:25:99:169,0,359	0/1:18,0:18:27.26:27,0,386	0/1:17,0:13:70.41:70,0,290	0/1:35,0:33:53.33:53,0,590	0/0:27,0:25:10.12:0,10,362	1/1:5,15:21:41.20:577,41,0	1/1:12,0:12:29:343,29,0	1/1:15,16:33:36.45:257,36,0	1/1:9,11:20:34.88:504,35,0	1/1:9,17:26:58.75:834,59,0	1/1:11,14:26:44.13:715,44,0	1/1:15,0:14:32.80:378,33,0
chr10	30437594	.	TC	T	7625.78	PASS	AB=0.689;AC=28;AF=0.500;AN=56;BaseQRankSum=-0.786;DP=668;FS=8.276;HRun=2;HaplotypeScore=111.6707;InbreedingCoeff=0.0900;MQ=54.58;MQ0=13;MQRankSum=-4.404;QD=15.53;ReadPosRankSum=12.061;VQSLOD=2.7078;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:24,10:34:9.19:437,9,0	0/1:3,6:9:53.94:207,0,54	0/0:13,0:6:15.05:0,15,225	0/0:14,0:8:20.41:0,20,238	0/1:11,7:18:37.56:313,0,38	1/1:15,11:26:38.32:425,38,0	0/1:15,16:31:99:619,0,201	0/0:27,0:23:62.66:0,63,866	1/1:7,5:12:19.83:212,20,0	0/1:14,14:26:97.90:546,0,98	0/1:9,8:16:99:271,0,135	1/1:25,18:43:19.14:697,19,0	0/1:15,13:28:30.05:472,0,30	1/1:21,10:31:46.76:432,47,0	1/1:13,14:27:5.51:523,6,0	1/1:30,9:37:2.43:397,2,0	0/0:28,0:28:30.48:0,30,630	0/0:19,0:19:54.01:0,54,722	0/0:14,0:12:36.10:0,36,468	0/0:36,0:34:77.17:0,77,1008	0/0:25,1:24:15.24:0,15,443	0/1:16,5:21:99:218,0,162	0/1:2,10:12:2.54:290,0,3	0/1:20,13:33:45.26:432,0,45	0/1:9,8:17:7.75:316,0,8	0/1:21,6:27:99:276,0,211	1/1:17,8:25:0.78:345,1,0	0/1:7,6:12:99:199,0,139
chr10	30440127	.	A	ATG	1619.26	PASS	AB=0.806;AC=11;AF=0.196;AN=56;BaseQRankSum=-0.202;DP=612;FS=40.535;HRun=0;HaplotypeScore=106.7219;InbreedingCoeff=0.5091;MQ=57.10;MQ0=13;MQRankSum=-4.798;QD=10.51;ReadPosRankSum=-4.966;VQSLOD=0.9437;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:27.08:0,27,319	0/0:11,0:11:6.02:0,6,69	0/0:14,0:7:9.02:0,9,99	0/0:14,0:6:3.01:0,3,36	0/0:27,0:27:36.11:0,36,426	0/0:22,0:21:18.16:0,18,265	0/0:28,0:27:9.77:0,10,418	1/1:20,17:35:60.07:868,60,0	0/0:12,0:12:11.06:0,11,125	0/0:32,0:31:5.17:0,5,675	0/0:18,0:18:23.99:0,24,284	0/0:30,0:30:50.26:0,50,603	0/0:22,0:22:0.25:0,0,124	0/0:23,0:23:20.45:0,20,225	0/0:24,0:24:24.23:0,24,284	0/0:12,0:13:17.89:0,18,192	1/1:11,20:30:24.08:380,24,0	0/1:9,6:15:36.84:189,0,37	1/1:17,0:14:12.02:158,12,0	0/1:11,8:18:37.46:39,0,37	1/1:11,16:26:8.07:141,8,0	0/0:21,0:21:12.04:0,12,141	0/0:20,0:21:29.11:0,29,362	0/0:29,0:29:27.08:0,27,319	0/0:20,0:20:33.10:0,33,388	0/0:24,0:24:20.95:0,21,325	0/0:25,0:25:5.87:0,6,315	0/1:8,0:8:2.94:3,0,112
chr10	30440143	.	GTGTGTA	G	772.01	PASS	AB=0.958;AC=6;AF=0.107;AN=56;BaseQRankSum=2.508;DP=651;FS=22.482;HRun=0;HaplotypeScore=131.1128;InbreedingCoeff=-0.1407;MQ=51.62;MQ0=19;MQRankSum=-1.512;QD=4.92;ReadPosRankSum=-3.910;VQSLOD=-0.2334;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:27.05:0,27,634	0/0:8,0:8:12.03:0,12,287	0/0:10,0:4:9.02:0,9,109	0/0:9,0:4:3.01:0,3,50	0/0:27,0:27:31.66:0,32,905	0/0:25,0:24:7.89:0,8,481	0/0:31,0:30:33.74:0,34,887	0/1:44,0:39:99:539,0,201	0/0:15,0:15:22.36:0,22,465	0/0:33,0:31:86.32:0,86,2126	0/0:19,0:19:21.29:0,21,628	0/0:34,0:34:23.19:0,23,1188	0/0:29,0:29:6.87:0,7,332	0/0:24,0:24:13.88:0,14,376	0/0:28,0:28:26.13:0,26,479	0/0:16,0:16:18.04:0,18,363	0/1:27,0:26:59.32:145,0,59	0/1:13,0:12:69.81:70,0,176	0/1:12,6:15:79.10:79,0,129	0/1:23,0:21:38.21:38,0,87	0/1:32,0:30:23.83:24,0,278	0/0:20,0:20:20.76:0,21,294	0/0:26,0:26:35.52:0,36,736	0/0:35,0:35:27.09:0,27,515	0/0:22,0:22:33.11:0,33,768	0/0:24,0:23:50.93:0,51,1077	0/0:23,0:23:42.08:0,42,799	0/0:8,0:8:21.03:0,21,378
chr10	30440149	.	A	ATGTGTG	846.98	PASS	AB=0.979;AC=15;AF=0.268;AN=56;BaseQRankSum=9.054;DP=660;FS=10.232;HRun=0;HaplotypeScore=133.7587;InbreedingCoeff=-0.3620;MQ=50.38;MQ0=18;MQRankSum=-1.643;QD=2.35;ReadPosRankSum=-1.141;VQSLOD=1.8208;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:26.66:0,27,356	0/1:6,0:6:34.65:35,0,70	0/0:11,0:4:5.95:0,6,71	0/0:13,0:5:3.01:0,3,37	0/1:26,0:26:54.58:55,0,227	0/1:25,0:24:5.59:6,0,230	0/0:30,0:29:17.91:0,18,456	0/1:43,0:39:27.24:27,0,555	0/1:16,0:16:60.07:60,0,180	0/1:35,0:33:19.18:19,0,792	0/0:21,0:21:18.63:0,19,348	0/1:35,0:35:1.66:2,0,602	0/1:29,0:29:52.31:52,0,213	0/0:25,0:25:19.70:0,20,282	0/1:28,0:28:36.74:37,0,274	0/0:17,0:17:13.20:0,13,202	0/0:24,0:23:15.11:0,15,260	0/1:12,0:11:2.24:2,0,154	0/1:18,0:16:16.83:17,0,234	0/0:23,0:21:10.03:0,10,78	0/1:33,0:31:79.88:80,0,141	0/0:24,0:24:7.13:0,7,79	0/0:26,0:26:30.73:0,31,381	0/0:33,0:33:20.92:0,21,238	0/0:23,0:23:30.47:0,30,417	0/1:12,7:21:99:362,0,283	0/1:23,0:23:99:164,0,265	0/1:8,0:8:49.30:77,0,49
chr10	30440155	.	GTA	G	544.62	PASS	AB=0.957;AC=17;AF=0.304;AN=56;BaseQRankSum=4.239;DP=664;FS=6.793;HRun=0;HaplotypeScore=100.1816;InbreedingCoeff=-0.3884;MQ=49.14;MQ0=15;MQRankSum=-2.267;QD=1.40;ReadPosRankSum=-3.013;VQSLOD=0.6943;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:13.83:0,14,211	0/0:6,0:6:10.53:0,11,83	0/1:10,0:4:7.11:7,0,27	0/1:17,0:4:1.10:1,0,11	0/1:25,0:25:55.48:55,0,263	0/1:21,3:23:20.13:20,0,118	0/1:22,9:30:14.04:14,0,254	0/1:40,2:37:99:162,0,368	0/1:10,7:17:39.93:40,0,108	0/0:35,0:33:45.62:0,46,762	0/1:23,0:23:48.23:48,0,247	0/1:34,2:36:55.26:55,0,407	0/1:31,0:31:70:70,0,103	0/0:26,0:26:10.07:0,10,125	0/0:27,0:27:17.24:0,17,128	0/0:18,0:18:17.58:0,18,140	0/0:22,0:21:23.42:0,23,209	0/1:12,0:11:2.52:3,0,123	0/1:16,0:16:12.61:13,0,133	0/1:23,0:21:26.68:37,0,27	0/1:34,0:32:67.41:67,0,142	0/0:25,0:25:8.74:0,9,125	0/0:28,0:28:11.73:0,12,222	0/0:33,0:33:20.22:0,20,141	0/0:22,0:22:29.98:0,30,285	0/1:22,0:21:90.39:90,0,413	0/1:20,0:20:1.41:1,0,199	0/1:6,0:6:8.37:8,0,47
chr10	30442341	.	G	GAC	5293.79	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-12.253;DP=606;FS=6.546;HRun=0;HaplotypeScore=76.9521;InbreedingCoeff=0.9439;MQ=65.63;MQ0=5;MQRankSum=-1.407;QD=32.88;ReadPosRankSum=-1.139;VQSLOD=6.5800;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:34:27.86:0,28,804	0/0:10,0:10:27.09:0,27,337	0/0:29,0:23:42.82:0,43,467	0/0:27,0:23:42.05:0,42,495	0/0:26,0:27:66.04:0,66,802	0/0:22,0:22:48.14:0,48,588	0/0:9,0:9:24.06:0,24,285	1/1:10,24:34:69.20:1063,69,0	0/0:14,0:14:33.09:0,33,400	0/0:27,0:29:84.02:0,84,990	0/0:23,0:25:53.83:0,54,628	0/0:15,0:15:33.11:0,33,413	0/0:24,0:24:72.21:0,72,886	0/0:17,0:17:45.14:0,45,562	0/0:20,0:20:46.40:0,46,585	0/0:15,0:15:39.11:0,39,475	1/1:7,22:29:65.25:1045,65,0	1/1:6,14:21:51.17:813,51,0	1/1:1,15:17:48.15:764,48,0	1/1:6,24:30:0.21:1064,0,0	1/1:10,18:27:33.11:545,33,0	0/0:16,0:16:42.13:0,42,525	0/0:16,0:16:30.10:0,30,375	0/0:15,0:15:33.11:0,33,413	0/0:29,0:30:75.07:0,75,914	0/0:21,0:21:51.15:0,51,627	0/0:20,0:20:48.14:0,48,586	0/0:10,0:10:18.06:0,18,225
chr10	30443775	.	AATATG	A	6729.04	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=4.671;DP=800;FS=0.809;HRun=0;HaplotypeScore=186.2703;InbreedingCoeff=0.9984;MQ=84.88;MQ0=0;MQRankSum=-12.989;QD=58.51;ReadPosRankSum=-1.988;VQSLOD=4.9800;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:59,0:59:99:0,178,5557	0/0:18,0:18:54.19:0,54,1771	0/0:26,0:26:74.93:0,75,2252	0/0:28,0:28:77.63:0,78,2091	0/0:30,0:30:90.31:0,90,2984	0/0:31,0:31:93.32:0,93,2994	0/0:32,0:32:96.33:0,96,3130	1/1:0,24:24:72.23:1588,72,0	0/0:28,0:28:84.26:0,84,2646	0/0:32,0:32:96.32:0,96,3050	0/0:28,0:28:81.28:0,81,2569	0/0:27,0:27:78.26:0,78,2474	0/0:35,0:35:99:0,105,3445	0/0:32,0:32:96.33:0,96,3132	0/0:35,0:35:99:0,105,3347	0/0:42,0:42:99:0,126,3974	1/1:0,19:19:48.16:1116,48,0	1/1:0,9:9:18.06:419,18,0	1/1:0,16:16:45.14:959,45,0	1/1:0,27:27:72.25:1672,72,0	1/1:0,20:20:42.14:975,42,0	0/0:34,0:34:99:0,102,3370	0/0:22,0:22:66.23:0,66,2171	0/0:27,0:27:75.26:0,75,2443	0/0:35,0:35:99:0,105,3497	0/0:45,0:45:99:0,135,4343	0/0:24,0:24:72.25:0,72,2398	0/0:15,0:15:45.15:0,45,1312
chr10	30445082	.	GTGGTAATCTCGAGAAAC	G	28083.09	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=15.276;DP=493;FS=20.016;HRun=0;HaplotypeScore=257.6364;InbreedingCoeff=0.9799;MQ=80.78;MQ0=0;MQRankSum=-14.584;QD=98.54;ReadPosRankSum=7.115;VQSLOD=3.0836;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,14:18:27.09:1270,27,0	1/1:1,4:5:9.03:350,9,0	0/0:22,0:22:54.45:0,54,3008	0/0:19,0:19:54.15:0,54,3222	1/1:2,10:12:24.08:1094,24,0	1/1:2,7:9:18.06:688,18,0	1/1:1,20:21:33.11:1542,33,0	0/0:35,0:35:99:0,99,5826	1/1:2,10:12:24.08:1191,24,0	1/1:6,13:19:39.12:1700,39,0	1/1:1,6:8:15.05:745,15,0	1/1:1,16:18:36.12:1766,36,0	1/1:1,14:15:36.12:1771,36,0	1/1:2,18:20:42.14:1915,42,0	1/1:4,13:17:33.11:1638,33,0	1/1:3,17:20:48.16:2383,48,0	0/0:28,0:28:81.28:0,81,5744	0/0:20,0:20:57.20:0,57,4559	0/0:11,0:11:30.10:0,30,1990	0/0:20,0:20:54.19:0,54,3768	0/0:53,0:53:99:0,154,10796	1/1:0,11:11:30.10:1223,30,0	1/1:3,9:12:15.05:745,15,0	1/1:5,2:7:18.05:471,18,0	1/1:1,16:17:42.14:1758,42,0	1/1:2,18:20:54.17:2558,54,0	1/1:2,16:18:48.16:2382,48,0	1/1:0,6:6:18.06:894,18,0
chr10	30445154	.	CTCTCTG	C	3602.62	PASS	AB=0.996;AC=39;AF=0.696;AN=56;BaseQRankSum=1.178;DP=645;FS=0.000;HRun=0;HaplotypeScore=295.2392;InbreedingCoeff=-0.1305;MQ=61.26;MQ0=19;MQRankSum=-2.648;QD=6.90;ReadPosRankSum=-5.740;VQSLOD=1.0485;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:16:4.56:70,5,0	0/1:8,0:8:30.46:45,0,30	0/0:54,0:28:40.54:0,41,522	0/0:68,0:37:38.90:0,39,527	1/1:15,0:15:19.28:96,19,0	0/1:23,0:22:19.77:182,0,20	1/1:20,0:19:8.86:57,9,0	0/1:42,0:42:99:153,0,133	0/1:15,0:15:11.57:136,0,12	0/1:29,0:28:99:184,0,284	1/1:18,1:19:31.65:178,32,0	1/1:26,0:26:37.21:225,37,0	0/1:23,0:23:27.94:163,0,28	1/1:26,1:27:50.81:302,51,0	1/1:21,0:21:38.63:229,39,0	1/1:23,1:24:38.11:233,38,0	0/1:17,0:16:86.66:87,0,150	0/1:11,0:10:37.36:37,0,142	0/1:16,0:15:51.13:51,0,230	0/1:21,0:21:11.33:106,0,11	1/1:22,0:20:8.99:75,9,0	1/1:17,0:17:26.59:144,27,0	1/1:21,0:20:32.71:191,33,0	1/1:9,0:9:2.65:17,3,0	1/1:28,1:29:56.29:337,56,0	0/1:26,0:24:99:101,0,236	0/1:16,1:17:99:180,0,108	0/1:5,0:5:24.97:25,0,53
chr10	30445158	.	C	CTCTCTT	10482.44	PASS	AB=1.000;AC=45;AF=0.804;AN=56;BaseQRankSum=4.456;DP=631;FS=27.421;HRun=0;HaplotypeScore=261.2034;InbreedingCoeff=0.3820;MQ=59.02;MQ0=21;MQRankSum=-4.745;QD=22.40;ReadPosRankSum=-4.525;VQSLOD=2.7806;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:15,2:14:9.22:158,9,0	1/1:7,0:8:13.96:161,14,0	0/0:53,0:26:43.21:0,43,715	0/0:69,0:36:47.59:0,48,834	1/1:11,3:14:21.05:235,21,0	1/1:13,5:22:51.80:691,52,0	1/1:3,12:18:8.96:125,9,0	0/0:37,0:39:9.09:0,9,525	1/1:8,4:14:23.53:555,24,0	1/1:18,7:27:42.33:1308,42,0	1/1:15,3:19:38.77:414,39,0	1/1:19,3:25:26.02:533,26,0	1/1:11,7:22:51.38:1025,51,0	1/1:17,5:27:56.88:634,57,0	1/1:11,8:20:42.50:497,42,0	1/1:16,2:22:45.16:502,45,0	0/1:19,0:18:16.25:16,0,187	0/1:11,0:10:26:27,0,26	0/1:14,0:13:25.98:26,0,162	0/1:21,0:21:38.91:39,0,59	0/1:21,0:19:16.48:16,0,40	1/1:11,2:17:34:320,34,0	1/1:14,3:19:39.59:425,40,0	1/1:4,3:9:4.56:40,5,0	1/1:18,4:29:62.98:703,63,0	1/1:17,6:23:51.05:1200,51,0	1/1:10,3:17:38.53:665,39,0	1/1:5,1:6:11.02:168,11,0
chr10	30445168	.	CTG	C	1051.72	PASS	AB=0.930;AC=31;AF=0.620;AN=50;BaseQRankSum=-2.583;DP=638;FS=1.913;HRun=0;HaplotypeScore=254.4928;InbreedingCoeff=-0.0710;MQ=49.25;MQ0=36;MQRankSum=-1.214;QD=2.27;ReadPosRankSum=-4.439;VQSLOD=1.8684;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:16:3.74:12,4,0	0/1:9,0:9:3.79:41,0,4	0/0:41,0:16:14.96:0,15,176	0/0:62,0:23:13.24:0,13,212	1/1:16,0:16:5.20:18,5,0	0/1:23,5:27:9.55:28,0,10	1/1:16,2:16:2.73:25,3,0	0/1:36,0:33:99:254,0,145	1/1:13,2:15:6.05:101,6,0	0/1:30,3:32:92.70:190,0,93	1/1:15,1:16:1.25:3,1,0	0/1:24,3:27:3.32:29,0,3	0/1:15,4:19:4.84:72,0,5	1/1:24,5:29:2.63:11,3,0	./.	1/1:19,4:23:5.88:36,6,0	0/1:19,0:18:15.42:15,0,83	0/1:13,0:11:45.23:45,0,68	0/0:14,0:13:5.44:0,5,234	0/1:22,0:21:7.12:61,0,7	1/1:20,0:16:8.99:75,9,0	1/1:19,3:21:2.49:6,2,0	./.	./.	1/1:27,6:33:2.92:17,3,0	0/1:26,2:26:51.01:97,0,51	0/1:13,4:17:12.08:59,0,12	0/0:7,0:6:4.50:0,4,23
chr10	30445190	.	GTC	G	180.32	PASS	AB=0.931;AC=11;AF=0.220;AN=50;BaseQRankSum=-0.793;DP=569;FS=11.297;HRun=0;HaplotypeScore=238.8572;InbreedingCoeff=0.1516;MQ=27.26;MQ0=46;MQRankSum=1.234;QD=0.97;ReadPosRankSum=0.874;VQSLOD=0.6007;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:13:3.84:0,4,17	0/0:11,0:11:8.40:0,8,120	./.	./.	0/0:12,0:12:0.94:0,1,1	0/0:27,0:26:9.89:0,10,113	0/0:19,0:17:1.25:0,1,4	0/0:37,0:32:65.65:0,66,733	0/1:14,0:14:6.76:7,0,101	0/0:35,0:32:75.57:0,76,846	0/0:15,0:15:0.47:0,0,1	0/1:19,0:19:13.63:29,0,14	0/0:22,0:21:25.90:0,26,261	0/0:26,0:26:2.93:0,3,16	0/1:25,0:25:0.02:0,0,0	0/1:19,0:19:0:0,0,0	0/1:15,3:20:33.50:34,0,148	0/1:7,2:8:78:78,0,80	0/1:16,3:19:90.12:90,0,501	1/1:15,4:22:5.65:54,6,0	./.	0/0:24,1:24:0.94:0,1,1	0/1:21,0:20:0.19:0,0,0	0/1:14,0:14:0:0,0,0	0/0:35,0:35:2.94:0,3,33	0/0:29,0:28:47.02:0,47,665	0/0:16,0:16:17.56:0,18,250	0/0:6,0:4:6.02:0,6,100
chr10	30445206	.	G	GTA	1320.56	PASS	AB=0.846;AC=24;AF=0.462;AN=52;BaseQRankSum=0.380;DP=576;FS=0.637;HRun=0;HaplotypeScore=236.0087;InbreedingCoeff=0.0240;MQ=28.84;MQ0=51;MQRankSum=1.610;QD=3.17;ReadPosRankSum=1.793;VQSLOD=2.6452;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:18,2:15:1.23:0,1,3	0/1:14,1:15:40.54:48,0,41	./.	./.	1/1:11,3:14:2.95:40,3,0	0/1:16,5:20:9.91:50,0,10	0/1:14,1:11:0:0,0,0	0/0:44,0:38:93.35:0,93,567	0/1:6,4:10:11.95:29,0,12	0/1:30,8:36:99:490,0,199	1/1:16,3:18:6.02:93,6,0	1/1:17,3:18:8.67:149,9,0	0/1:14,3:16:19.87:93,0,20	0/1:19,7:25:0.01:0,0,0	0/1:21,5:26:0.07:0,0,0	0/1:13,3:15:0:0,0,0	0/0:25,0:24:8.42:0,8,111	0/0:11,0:9:8.31:0,8,32	0/0:22,0:21:35.47:0,35,357	0/1:24,0:23:9.48:9,0,10	0/1:21,0:16:0:1,0,0	1/1:17,6:22:5.57:49,6,0	0/1:16,4:20:0.12:0,0,0	0/1:8,9:18:0:0,0,0	0/1:21,9:29:13.23:44,0,13	0/1:24,7:30:99:319,0,121	0/1:12,1:13:38.38:38,0,75	0/0:6,1:5:6.79:0,7,40
chr10	30445210	.	G	GTA	480.38	PASS	AB=0.985;AC=18;AF=0.346;AN=52;BaseQRankSum=0.292;DP=577;FS=6.260;HRun=0;HaplotypeScore=235.5299;InbreedingCoeff=-0.1680;MQ=29.90;MQ0=49;MQRankSum=-0.236;QD=1.26;ReadPosRankSum=3.359;VQSLOD=1.9279;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:19:2.89:0,3,20	0/0:15,0:15:17.25:0,17,116	./.	./.	0/0:15,0:15:4.06:0,4,45	0/0:20,0:19:0.40:0,0,19	0/1:16,0:12:0.06:0,0,0	0/1:47,0:41:99:143,0,331	0/1:10,0:10:11.54:12,0,13	0/1:41,0:39:71.50:71,0,353	0/1:20,0:19:28.30:28,0,41	0/1:21,0:19:18.84:19,0,36	0/1:16,0:15:3.55:4,0,49	0/1:24,0:23:0.01:0,0,0	0/0:24,0:24:2.69:0,3,25	0/1:17,0:16:0:0,0,0	0/1:24,0:23:74.15:80,0,74	1/1:11,0:9:11.66:114,12,0	0/1:22,0:20:73.10:73,0,215	0/0:26,0:25:2.50:0,2,10	0/1:15,5:17:0:1,0,0	0/0:24,0:23:9.45:0,9,73	0/1:20,0:20:0.12:0,0,0	0/0:19,0:18:5.59:0,6,37	0/1:27,0:26:4.30:4,0,35	0/1:31,0:30:48.32:48,0,188	0/1:12,0:12:6.49:6,0,61	0/0:7,0:5:2.97:0,3,20
chr10	30445615	.	CTT	C	11032.59	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-4.674;DP=592;FS=0.908;HRun=12;HaplotypeScore=89.6006;InbreedingCoeff=0.7776;MQ=71.96;MQ0=2;MQRankSum=-3.435;QD=19.49;ReadPosRankSum=3.670;VQSLOD=4.3911;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,36:41:99:1019,102,0	1/1:0,3:3:3.01:31,3,0	0/0:17,0:15:1.33:0,1,156	0/0:7,0:8:14.51:0,15,148	1/1:4,21:26:59.84:591,60,0	1/1:8,10:18:23.97:244,24,0	1/1:2,14:17:41.83:409,42,0	1/1:7,0:35:76.58:330,77,0	1/1:3,15:18:39.08:397,39,0	1/1:5,17:23:44.77:496,45,0	1/1:4,13:18:41.81:408,42,0	1/1:5,20:25:60.07:610,60,0	1/1:1,22:23:60.12:610,60,0	1/1:5,11:16:36.05:359,36,0	1/1:3,16:20:32.79:388,33,0	1/1:0,22:22:57.13:580,57,0	1/1:2,1:27:57.89:268,58,0	1/1:1,0:20:41.16:178,41,0	1/1:7,0:25:45.92:193,46,0	1/1:2,0:20:46.64:202,47,0	1/1:4,0:19:34.23:151,34,0	1/1:2,18:21:44.80:510,45,0	1/1:1,22:23:50.65:518,51,0	1/1:2,8:10:21.02:214,21,0	1/1:3,21:24:57.08:580,57,0	1/1:3,23:27:62.35:656,62,0	1/1:4,21:27:53.47:635,53,0	1/1:2,14:16:45.10:458,45,0
chr10	30447922	.	ACACACACACCCACACC	A	1942.84	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=6.063;DP=503;FS=40.026;HRun=0;HaplotypeScore=256.2821;InbreedingCoeff=0.4771;MQ=67.71;MQ0=11;MQRankSum=-5.419;QD=9.48;ReadPosRankSum=-1.648;VQSLOD=1.3831;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:24:54.13:0,54,887	0/0:7,0:7:15.01:0,15,272	0/1:31,0:21:20.54:21,0,295	0/1:27,0:21:52.19:52,0,325	0/0:14,0:14:12.12:0,12,515	0/0:24,0:23:40.22:0,40,854	0/0:22,0:22:48.37:0,48,768	1/1:12,0:11:18.05:283,18,0	0/0:14,0:13:27.03:0,27,538	0/1:14,0:14:29.89:30,0,588	0/0:8,0:7:3.09:0,3,84	0/0:30,0:29:21.23:0,21,813	0/1:17,0:17:35.91:36,0,434	0/0:25,0:25:13.16:0,13,594	0/0:18,0:18:2.18:0,2,448	0/0:18,0:18:14.95:0,15,485	1/1:14,0:14:28.64:414,29,0	1/1:11,0:11:27:365,27,0	1/1:7,0:7:6.02:107,6,0	1/1:5,12:17:3.01:36,3,0	1/1:31,0:29:54.59:778,55,0	0/0:16,0:14:24:0,24,470	0/0:9,0:9:23.94:0,24,368	0/0:28,0:28:28.28:0,28,651	0/0:14,0:14:9.80:0,10,568	0/0:18,0:18:33.10:0,33,729	0/1:23,0:23:3.08:3,0,618	0/0:8,0:7:18.03:0,18,274
chr10	30447941	.	CA	C	36.47	PASS	AB=0.841;AC=10;AF=0.179;AN=56;BaseQRankSum=7.928;DP=516;FS=2.568;HRun=1;HaplotypeScore=153.8147;InbreedingCoeff=-0.1868;MQ=54.64;MQ0=29;MQRankSum=-8.432;QD=0.18;ReadPosRankSum=5.618;VQSLOD=-0.4503;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:20,1:21:3.97:4,0,161	0/0:7,0:7:14.61:0,15,130	0/0:22,0:12:29.57:0,30,334	0/0:17,0:10:22.88:0,23,244	0/0:16,2:16:18.25:0,18,86	0/1:19,3:21:28.62:29,0,113	0/0:23,2:24:53.01:0,53,329	0/1:21,0:17:1.26:1,0,300	0/0:9,3:10:8.44:0,8,82	0/0:16,3:16:8.86:0,9,184	0/1:7,3:7:4.81:5,0,7	0/1:27,6:33:7.51:8,0,177	0/1:13,3:17:7.56:8,0,133	0/0:20,5:25:2.65:0,3,182	0/1:11,8:20:42.54:43,0,72	0/0:14,3:17:5.06:0,5,180	0/0:18,0:18:35.03:0,35,431	0/0:16,0:14:34.34:0,34,418	0/1:11,0:11:14.50:14,0,151	0/0:14,0:13:3.01:0,3,38	0/0:37,0:35:56.61:0,57,677	0/0:16,1:14:18.47:0,18,146	0/0:10,2:11:9.58:0,10,105	0/1:20,5:24:2.22:2,0,89	0/0:12,4:16:7.58:0,8,119	0/0:14,2:15:22:0,22,196	0/1:10,10:20:45.10:45,0,151	0/0:6,0:5:11.66:0,12,99
chr10	30447943	.	CACACACACACA	C	4834.53	PASS	AB=0.853;AC=19;AF=0.339;AN=56;BaseQRankSum=10.042;DP=509;FS=19.228;HRun=0;HaplotypeScore=206.2719;InbreedingCoeff=-0.5102;MQ=53.39;MQ0=30;MQRankSum=-6.210;QD=14.43;ReadPosRankSum=5.810;VQSLOD=2.0708;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,1:20:20.60:0,21,244	0/1:6,0:6:40.01:45,0,40	0/0:20,0:10:25.07:0,25,248	0/0:15,0:8:17.08:0,17,186	0/1:17,2:17:59.77:60,0,61	0/1:18,3:20:83.14:283,0,83	0/1:23,2:24:99:297,0,166	0/0:22,0:18:49.97:0,50,969	0/1:8,3:9:65.65:89,0,66	0/1:15,2:15:99:217,0,157	0/1:7,3:7:9.08:74,0,9	0/1:28,6:33:99:480,0,146	0/1:15,3:17:82.12:343,0,82	0/1:20,4:25:35.91:562,0,36	0/1:13,8:21:42.68:615,0,43	0/1:13,3:16:79.10:340,0,79	0/0:17,0:17:36.59:0,37,654	0/0:16,0:14:39.13:0,39,686	0/0:12,0:12:30.24:0,30,428	0/0:14,0:13:3.01:0,3,38	0/0:38,0:36:59.85:0,60,1042	0/1:16,1:14:81.13:81,0,108	0/1:9,1:10:51.50:52,0,64	0/1:20,5:24:59.63:302,0,60	0/1:12,3:16:86.93:176,0,87	0/1:15,2:16:99:226,0,129	0/1:10,10:20:97.99:587,0,98	0/1:5,0:4:8.13:8,0,71
chr10	30448775	.	T	TAC	21771.33	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-4.723;DP=685;FS=12.593;HRun=0;HaplotypeScore=115.2543;InbreedingCoeff=0.9995;MQ=87.10;MQ0=3;MQRankSum=-4.962;QD=44.25;ReadPosRankSum=6.973;VQSLOD=5.6087;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,39:43:99:1967,111,0	1/1:1,12:13:36.12:639,36,0	0/0:26,0:26:69.19:0,69,895	0/0:34,0:33:80.82:0,81,997	1/1:3,26:30:75.26:1331,75,0	1/1:3,27:29:69.24:1223,69,0	1/1:4,14:18:36.12:639,36,0	0/0:27,0:27:72.24:0,72,989	1/1:1,21:22:60.21:1065,60,0	1/1:1,15:15:42.12:714,42,0	1/1:4,24:28:69.24:1224,69,0	1/1:2,24:27:69.19:1188,69,0	1/1:4,31:36:87.30:1544,87,0	1/1:1,14:15:45.15:795,45,0	1/1:2,26:28:72.25:1278,72,0	1/1:1,24:25:69.24:1225,69,0	0/0:24,0:24:66.22:0,66,906	0/0:13,0:13:33.11:0,33,453	0/0:12,0:12:33.11:0,33,454	0/0:36,0:36:99:0,99,1344	0/0:21,0:21:54.16:0,54,724	1/1:3,16:19:48.16:852,48,0	1/1:2,19:21:51.17:905,51,0	1/1:3,25:28:66.23:1171,66,0	1/1:6,20:26:60.20:1048,60,0	1/1:2,26:28:81.22:1369,81,0	1/1:3,24:29:66.70:1169,67,0	1/1:0,8:8:24.08:426,24,0
chr10	30453112	.	A	AATTATTATTATTATTATTA	14614.43	PASS	AC=48;AF=0.923;AN=52;BaseQRankSum=0.972;DP=254;FS=0.000;HRun=0;HaplotypeScore=152.2818;InbreedingCoeff=0.5494;MQ=65.19;MQ0=0;MQRankSum=-3.896;QD=62.72;ReadPosRankSum=2.740;VQSLOD=4.4209;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,1:11:14.98:771,15,0	1/1:3,0:3:6.02:348,6,0	0/0:7,0:7:11.99:0,12,288	0/0:8,0:8:14.97:0,15,264	1/1:6,0:6:6.02:363,6,0	1/1:8,0:8:15.01:696,15,0	1/1:10,0:10:15.03:373,15,0	1/1:38,0:38:75.26:2080,75,0	1/1:6,0:7:18.06:839,18,0	1/1:8,0:10:11.96:599,12,0	1/1:3,0:3:3.01:150,3,0	1/1:5,0:5:9.02:262,9,0	1/1:5,0:5:9.03:415,9,0	1/1:4,0:4:3.01:196,3,0	1/1:11,0:11:12.04:524,12,0	1/1:10,0:10:12.04:505,12,0	1/1:4,0:9:12.04:370,12,0	1/1:6,0:9:15.05:515,15,0	1/1:13,0:21:48.16:1420,48,0	1/1:9,0:12:21.07:599,21,0	./.	./.	1/1:4,0:4:3:25,3,0	1/1:1,0:1:3.01:72,3,0	1/1:12,0:14:17.99:768,18,0	1/1:9,0:9:15.05:649,15,0	1/1:13,0:13:18.06:732,18,0	1/1:10,0:10:18.06:1343,18,0
chr10	30453662	.	T	TCCA	5249.26	PASS	AB=1.000;AC=32;AF=0.571;AN=56;BaseQRankSum=-6.083;DP=935;FS=1.954;HRun=0;HaplotypeScore=190.6117;InbreedingCoeff=-0.4363;MQ=66.08;MQ0=3;MQRankSum=-2.538;QD=6.08;ReadPosRankSum=-7.248;VQSLOD=1.8692;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:54,0:54:99:111,0,441	0/1:14,0:14:36.20:36,0,120	0/0:38,0:32:44.64:0,45,597	0/0:33,0:28:42.56:0,43,574	0/1:20,0:20:99:113,0,138	0/1:31,0:31:99:139,0,213	0/1:45,0:45:99:249,0,277	1/1:34,0:34:92.62:929,93,0	0/1:35,0:35:99:106,0,317	0/1:40,0:40:99:197,0,241	0/1:19,0:19:99:100,0,137	0/1:34,0:34:99:153,0,262	0/1:44,0:44:38.85:39,0,438	0/1:51,0:51:99:101,0,418	0/1:42,0:42:99:156,0,309	0/1:53,0:53:99:188,0,384	1/1:26,0:26:15.05:253,15,0	1/1:25,1:26:15.05:257,15,0	1/1:27,0:27:63.04:719,63,0	1/1:31,0:31:38.90:493,39,0	1/1:9,30:38:8.96:179,9,0	0/1:27,0:27:17.30:17,0,214	0/1:27,0:27:99:211,0,161	0/1:48,0:48:59.98:60,0,454	0/1:24,0:24:99:112,0,216	0/1:33,0:33:99:186,0,150	0/1:30,0:30:99:141,0,229	0/1:7,0:7:2.63:3,0,73
chr10	30453666	.	C	CCACCAT	7232.85	PASS	AB=1.000;AC=32;AF=0.571;AN=56;BaseQRankSum=-9.602;DP=955;FS=1.524;HRun=0;HaplotypeScore=241.0671;InbreedingCoeff=-0.4053;MQ=62.90;MQ0=4;MQRankSum=-1.937;QD=8.11;ReadPosRankSum=-10.485;VQSLOD=0.4161;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:53,0:53:92.68:93,0,1235	0/1:15,0:15:30.82:31,0,345	0/0:36,0:29:50.35:0,50,625	0/0:27,0:23:42.56:0,43,657	0/1:22,0:22:99:106,0,411	0/1:34,0:34:99:132,0,612	0/1:45,0:45:99:241,0,799	1/1:7,27:46:99:1528,117,0	0/1:33,0:33:99:104,0,819	0/1:41,0:41:99:188,0,770	0/1:21,0:21:89.84:90,0,436	0/1:34,0:34:99:148,0,744	0/1:44,0:44:30.64:31,0,1128	0/1:51,0:51:84.14:84,0,1194	0/1:41,0:41:99:147,0,875	0/1:49,0:49:99:181,0,1048	1/1:1,24:33:15.05:508,15,0	1/1:2,22:26:15.03:453,15,0	1/1:24,4:25:71.98:1326,72,0	1/1:3,26:31:47.80:1073,48,0	1/1:38,1:38:11.18:89,11,0	0/1:28,0:28:3.36:3,0,638	0/1:28,0:28:99:213,0,450	0/1:46,0:46:53.35:53,0,1207	0/1:27,0:27:99:105,0,595	0/1:34,0:34:99:172,0,535	0/1:31,0:31:99:134,0,646	0/1:12,0:12:1.93:2,0,199
chr10	30454060	.	G	GA	20699.03	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-3.382;DP=672;FS=0.000;HRun=5;HaplotypeScore=94.8070;InbreedingCoeff=0.9993;MQ=77.18;MQ0=0;MQRankSum=-8.267;QD=32.39;ReadPosRankSum=5.639;VQSLOD=4.4946;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,33:33:81.26:1066,81,0	1/1:1,10:11:30.10:395,30,0	0/0:13,0:13:36.06:0,36,359	0/0:20,0:20:32.04:0,32,332	1/1:2,19:21:54.09:668,54,0	1/1:0,29:29:72.23:947,72,0	1/1:0,20:20:51.17:671,51,0	1/1:5,24:29:72.18:878,72,0	1/1:0,22:22:51.17:671,51,0	1/1:0,31:30:93.29:1209,93,0	1/1:4,14:18:39.13:509,39,0	1/1:1,17:18:42.01:552,42,0	1/1:5,29:34:78.25:1026,78,0	1/1:3,29:32:66.21:868,66,0	1/1:2,29:31:78.25:1026,78,0	1/1:2,25:27:66.21:868,66,0	1/1:1,22:23:57.19:750,57,0	1/1:1,16:17:45.15:592,45,0	1/1:2,18:20:54.17:696,54,0	1/1:2,33:35:90.25:1154,90,0	1/1:5,15:20:42.14:553,42,0	1/1:2,15:17:42.14:553,42,0	1/1:2,21:23:51.16:671,51,0	1/1:1,24:25:66.21:864,66,0	1/1:2,28:30:72.23:947,72,0	1/1:3,25:28:72.19:912,72,0	1/1:1,33:34:93.30:1217,93,0	1/1:0,11:11:33.11:434,33,0
chr10	30454613	.	AACAC	A	5455.16	PASS	AB=0.884;AC=32;AF=0.593;AN=54;BaseQRankSum=1.296;DP=566;FS=2.128;HRun=0;HaplotypeScore=119.7932;InbreedingCoeff=0.6182;MQ=67.26;MQ0=17;MQRankSum=2.770;QD=15.37;ReadPosRankSum=2.816;VQSLOD=4.6998;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:20:3.11:327,3,0	./.	0/0:30,0:14:3.01:0,3,42	0/0:45,0:19:9.03:0,9,141	0/1:21,0:21:23.54:84,0,24	1/1:22,1:24:36.10:512,36,0	1/1:17,0:17:18.06:269,18,0	0/0:33,0:33:39.61:0,40,563	1/1:19,0:18:26.53:326,27,0	1/1:19,1:19:27.09:406,27,0	1/1:5,14:18:5.88:51,6,0	1/1:14,0:14:30.09:442,30,0	0/1:23,1:23:5.37:304,0,5	1/1:21,2:23:51.17:778,51,0	1/1:30,0:29:16.44:227,16,0	1/1:17,3:19:27.56:393,28,0	0/0:18,0:18:30.10:0,30,486	0/0:11,0:11:20.97:0,21,249	0/0:13,0:12:12.66:0,13,150	0/0:19,0:19:26.30:0,26,379	0/0:14,0:12:8.97:0,9,146	0/0:4,11:15:2.92:0,3,17	0/1:5,14:19:0:0,0,0	1/1:10,16:25:3.01:49,3,0	1/1:17,1:19:33.03:497,33,0	1/1:12,1:13:27.09:397,27,0	1/1:20,2:22:22.99:363,23,0	0/1:3,0:2:16.18:32,0,16
chr10	30454643	.	CAGAGAGAG	C	819.65	PASS	AB=1.000;AC=11;AF=0.212;AN=52;BaseQRankSum=-1.064;DP=584;FS=0.000;HRun=0;HaplotypeScore=190.6664;InbreedingCoeff=0.6672;MQ=50.83;MQ0=19;MQRankSum=-0.760;QD=8.91;ReadPosRankSum=0.078;VQSLOD=2.6023;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:20.66:0,21,400	0/0:14,0:14:6.02:0,6,141	./.	./.	0/0:29,0:29:47.16:0,47,1238	0/0:24,0:22:30.78:0,31,659	0/0:21,0:19:14.92:0,15,474	0/0:26,0:26:4.53:0,5,25	0/1:11,0:10:2.81:3,0,114	0/0:19,0:19:32.76:0,33,663	0/0:28,0:27:26.62:0,27,768	0/0:21,0:21:33.22:0,33,729	0/0:25,0:22:40.29:0,40,965	0/0:35,0:33:57.14:0,57,1361	0/0:28,0:24:10.20:0,10,452	0/0:21,0:20:36.79:0,37,876	1/1:22,4:25:38.91:677,39,0	1/1:9,1:10:8.16:176,8,0	1/1:11,0:9:2.92:17,3,0	1/1:14,7:21:2.58:75,3,0	1/1:10,3:12:3.22:12,3,0	0/0:27,0:26:23.47:0,23,647	0/0:25,0:25:10.42:0,10,271	0/0:31,0:29:20.96:0,21,554	0/0:31,0:30:36.50:0,36,818	0/0:18,0:15:30.33:0,30,440	0/0:34,0:32:26.55:0,27,1133	0/0:3,0:2:2.50:0,2,9
chr10	30454750	.	GCATA	G	18800.07	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-1.368;DP=648;FS=1.097;HRun=0;HaplotypeScore=157.5399;InbreedingCoeff=0.9079;MQ=66.24;MQ0=4;MQRankSum=-0.135;QD=31.39;ReadPosRankSum=3.265;VQSLOD=4.5597;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,20:28:57.19:934,57,0	1/1:3,11:14:30.06:462,30,0	0/0:24,0:21:22.59:0,23,396	0/0:24,0:19:12.02:0,12,177	1/1:10,22:32:60.16:954,60,0	1/1:7,20:28:54.18:873,54,0	1/1:9,12:21:23.98:335,24,0	1/1:18,14:31:42.14:685,42,0	1/1:6,7:13:24.08:393,24,0	1/1:6,27:33:81.25:1301,81,0	1/1:5,20:25:42.06:630,42,0	1/1:2,16:18:36.12:590,36,0	1/1:6,26:32:63.15:976,63,0	1/1:9,16:25:48.16:786,48,0	1/1:2,26:27:72.25:1179,72,0	1/1:3,20:23:51.17:835,51,0	1/1:3,9:12:21.07:344,21,0	1/1:4,13:17:33.11:541,33,0	1/1:7,3:8:6.02:98,6,0	1/1:6,20:25:57.19:934,57,0	1/1:1,10:11:18.06:295,18,0	1/1:11,17:28:48.09:729,48,0	1/1:7,14:21:27.09:442,27,0	1/1:8,4:12:12.04:197,12,0	1/1:7,33:40:90.31:1474,90,0	1/1:6,29:35:87.30:1418,87,0	1/1:4,21:25:60.17:955,60,0	1/1:0,10:10:27.09:442,27,0
chr10	30455218	.	A	AT	4705.42	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-13.276;DP=710;FS=0.346;HRun=8;HaplotypeScore=72.5951;InbreedingCoeff=0.9997;MQ=77.71;MQ0=0;MQRankSum=-1.589;QD=26.29;ReadPosRankSum=-2.283;VQSLOD=4.6015;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:74.99:0,75,679	0/0:15,0:15:39:0,39,352	0/0:18,0:19:35.99:0,36,322	0/0:17,0:17:26.99:0,27,241	0/0:27,0:27:75.02:0,75,681	0/0:29,0:29:84.03:0,84,764	0/0:19,0:19:48.02:0,48,439	1/1:8,24:32:72.21:831,72,0	0/0:26,0:26:75.04:0,75,686	0/0:40,0:40:99:0,117,1062	0/0:23,0:23:66.03:0,66,604	0/0:35,0:35:93.01:0,93,842	0/0:24,0:24:69.04:0,69,632	0/0:22,0:22:66.04:0,66,604	0/0:20,0:20:54:0,54,489	0/0:15,0:15:42.02:0,42,384	1/1:3,28:31:78.19:885,78,0	1/1:6,12:18:39.06:424,39,0	1/1:7,25:32:50.63:807,51,0	1/1:5,38:43:83.83:1205,84,0	1/1:2,21:23:48.14:554,48,0	0/0:15,0:15:45.02:0,45,412	0/0:34,0:34:96.04:0,96,874	0/0:15,0:15:42.02:0,42,384	0/0:31,0:31:75.03:0,75,686	0/0:26,0:25:69.04:0,69,632	0/0:34,0:34:89.96:0,90,804	0/0:13,0:13:39.02:0,39,356
chr10	30455313	.	GTTGGAGTAGGTGTGGCCTTA	G	5917.03	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=9.368;DP=731;FS=0.000;HRun=0;HaplotypeScore=359.0085;InbreedingCoeff=0.9961;MQ=54.81;MQ0=12;MQRankSum=-8.700;QD=57.45;ReadPosRankSum=-3.799;VQSLOD=2.5270;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:93.32:0,93,7031	0/0:11,0:11:30.10:0,30,2550	0/0:38,0:17:43.38:0,43,2728	0/0:28,0:20:45.07:0,45,2602	0/0:39,0:39:99:0,102,7829	0/0:24,0:24:66.21:0,66,4732	0/0:29,0:29:78.25:0,78,5649	1/1:6,11:15:33.09:497,33,0	0/0:33,0:33:99:0,99,7309	0/0:28,0:28:72.24:0,72,4844	0/0:19,0:19:45.05:0,45,2655	0/0:39,0:39:99:0,102,7262	0/0:33,0:33:90.31:0,90,7143	0/0:39,0:39:99:0,108,7826	0/0:28,0:28:81.28:0,81,6442	0/0:31,0:31:90.31:0,90,7469	1/1:10,3:13:24.01:689,24,0	1/1:8,5:13:32:1110,32,0	1/1:9,3:10:15.05:627,15,0	1/1:9,19:28:77.88:2309,78,0	1/1:15,5:20:42.13:685,42,0	0/0:27,0:27:78.27:0,78,6290	0/0:22,0:22:60.20:0,60,4577	0/0:21,0:21:54.19:0,54,4416	0/0:31,0:31:93.26:0,93,6784	0/0:24,0:24:69.24:0,69,5869	0/0:38,0:38:99:0,108,8549	0/0:12,0:12:36.12:0,36,3016
chr10	30456688	.	TACATATATAC	T	17525.79	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=12.764;DP=487;FS=0.000;HRun=0;HaplotypeScore=147.6369;InbreedingCoeff=0.8941;MQ=54.87;MQ0=1;MQRankSum=-11.682;QD=50.22;ReadPosRankSum=5.375;VQSLOD=4.5650;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,12:16:21.07:666,21,0	1/1:2,4:6:12.04:381,12,0	0/0:7,0:4:6.02:0,6,203	0/0:12,0:4:8.91:0,9,170	1/1:3,26:29:51.13:1514,51,0	1/1:5,20:25:45.15:1406,45,0	1/1:3,13:16:18.06:547,18,0	0/0:36,0:36:87.30:0,87,3436	1/1:0,11:11:21.07:667,21,0	1/1:1,18:19:54.06:1385,54,0	1/1:4,25:29:54.19:1664,54,0	1/1:5,18:23:27.09:857,27,0	1/1:4,13:17:33.11:1023,33,0	1/1:4,18:22:27.09:857,27,0	1/1:5,28:33:63.17:1872,63,0	1/1:2,20:22:33.11:985,33,0	0/0:19,0:19:48.16:0,48,2324	0/0:12,0:12:30.10:0,30,1168	0/0:17,0:17:36.12:0,36,1434	0/0:24,0:24:63.22:0,63,2878	0/0:11,0:11:27.09:0,27,1275	1/1:1,7:8:15.05:469,15,0	1/1:5,8:13:8.56:285,9,0	1/1:0,2:2:3.01:95,3,0	1/1:5,14:19:24.08:762,24,0	1/1:2,15:17:42.13:1161,42,0	1/1:2,16:18:27.09:834,27,0	1/1:0,3:3:3.01:95,3,0
chr10	30457171	.	CTATATATA	C	760.22	PASS	AB=0.826;AC=6;AF=0.250;AN=24;BaseQRankSum=1.128;DP=150;FS=7.871;HRun=0;HaplotypeScore=42.9788;InbreedingCoeff=0.1877;MQ=58.65;MQ0=14;MQRankSum=-1.936;QD=11.02;ReadPosRankSum=-1.667;VQSLOD=0.0928;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:4:2.97:0,3,20	0/0:2,0:2:0:0,0,0	./.	./.	./.	./.	0/0:3,0:3:2.99:0,3,23	0/1:23,4:28:15.90:383,0,16	0/0:1,0:1:3.01:0,3,74	0/0:9,0:9:9.03:0,9,293	./.	./.	./.	./.	./.	./.	1/1:12,0:10:1.18:2,1,0	1/1:10,1:7:11.04:166,11,0	0/1:13,1:15:2.90:298,0,3	0/0:4,0:4:2.90:0,3,16	./.	./.	./.	./.	./.	0/0:4,0:3:3.01:0,3,107	./.	0/0:5,0:3:3.01:0,3,72
chr10	30457476	.	CT	C	12552.58	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-2.353;DP=520;FS=1.608;HRun=8;HaplotypeScore=78.0360;InbreedingCoeff=0.9434;MQ=83.72;MQ0=0;MQRankSum=-8.383;QD=26.10;ReadPosRankSum=4.571;VQSLOD=5.3404;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,27:28:78.13:753,78,0	1/1:0,9:9:21.03:203,21,0	0/0:25,0:25:56.44:0,56,652	0/0:14,0:14:30.08:0,30,349	1/1:0,17:17:48.07:463,48,0	1/1:1,29:30:81.13:782,81,0	1/1:0,16:16:45.07:435,45,0	1/1:7,40:47:99:1144,120,0	1/1:0,12:12:36.06:347,36,0	1/1:2,11:13:33.05:319,33,0	1/1:0,14:14:42.07:406,42,0	1/1:3,23:26:63.10:608,63,0	1/1:0,25:25:72.12:695,72,0	1/1:2,13:15:33.05:319,33,0	1/1:0,13:13:39.06:377,39,0	1/1:0,19:19:54.09:522,54,0	1/1:0,29:29:84.14:811,84,0	1/1:1,8:9:24.03:232,24,0	1/1:5,18:23:57.07:546,57,0	1/1:1,21:22:63.10:608,63,0	1/1:2,15:17:42.07:406,42,0	1/1:0,8:8:24.04:232,24,0	1/1:0,15:15:45.07:434,45,0	1/1:2,14:16:36.05:348,36,0	1/1:2,9:11:27.04:261,27,0	1/1:2,19:21:57.09:550,57,0	1/1:0,24:24:72.12:695,72,0	1/1:0,2:2:6.01:58,6,0
chr10	30459064	.	A	AAGCATCCCCC	10723.60	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-12.851;DP=608;FS=4.109;HRun=0;HaplotypeScore=213.6074;InbreedingCoeff=0.9852;MQ=83.22;MQ0=0;MQRankSum=-11.556;QD=79.43;ReadPosRankSum=-3.373;VQSLOD=4.0691;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:27.09:0,27,843	0/0:4,0:4:9.03:0,9,281	0/0:20,0:20:37.34:0,37,1032	0/0:21,0:21:36.55:0,37,967	0/0:23,0:23:57.20:0,57,1779	0/0:26,0:26:66.23:0,66,1922	0/0:23,0:23:45.15:0,45,1326	1/1:30,8:42:72.21:2922,72,0	0/0:24,0:24:60.21:0,60,1853	0/0:15,0:15:42.13:0,42,1172	0/0:13,0:13:39.13:0,39,1217	0/0:38,0:38:99:0,99,2908	0/0:28,0:28:75.26:0,75,2318	0/0:18,0:18:51.17:0,51,1525	0/0:39,0:39:99:0,114,3448	0/0:29,0:29:75.26:0,75,2271	1/1:12,5:18:30.10:1478,30,0	1/1:5,4:10:21.07:985,21,0	1/1:15,7:22:48.09:1887,48,0	1/1:9,15:25:54.18:2634,54,0	1/1:15,2:18:18.06:818,18,0	0/0:22,0:22:57.18:0,57,1669	0/0:19,0:19:51.13:0,51,1509	0/0:13,0:13:30.10:0,30,936	0/0:10,0:10:30.10:0,30,936	0/0:25,0:25:57.18:0,57,1693	0/0:37,0:36:93.29:0,93,2615	0/0:13,0:13:39.13:0,39,1174
chr10	30459649	.	CT	C	1163.30	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.620;DP=696;FS=1.514;HRun=1;HaplotypeScore=110.5855;InbreedingCoeff=0.8507;MQ=74.33;MQ0=0;MQRankSum=-4.133;QD=37.53;ReadPosRankSum=0.878;VQSLOD=3.5680;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:84.29:0,84,1340	0/0:16,0:16:48.15:0,48,741	0/0:19,0:19:57.12:0,57,857	0/0:13,0:13:39.09:0,39,575	0/0:21,0:21:63.21:0,63,1005	0/0:32,0:32:96.31:0,96,1504	0/0:31,0:31:93.29:0,93,1438	0/0:31,0:31:93.30:0,93,1443	0/0:36,0:36:99:0,105,1621	0/0:19,0:19:57.19:0,57,911	0/0:20,0:20:60.18:0,60,909	0/0:27,0:27:81.26:0,81,1266	0/0:34,0:34:96.30:0,96,1489	0/0:25,0:25:75.24:0,75,1171	0/0:30,0:30:90.31:0,90,1437	1/1:0,31:31:90.30:1258,90,0	0/0:28,0:28:84.29:0,84,1343	0/0:11,0:11:33.11:0,33,527	0/0:34,0:34:99:0,102,1632	0/0:31,0:31:93.32:0,93,1484	0/0:26,0:26:78.27:0,78,1245	0/0:22,0:22:63.21:0,63,1002	0/0:21,0:21:60.20:0,60,956	0/0:26,0:26:78.27:0,78,1239	0/0:22,0:22:66.21:0,66,1026	0/0:31,0:31:93.32:0,93,1484	0/0:30,0:30:90.31:0,90,1434	0/0:1,0:1:3.01:0,3,48
chr10	30460022	.	G	GC	30085.44	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-8.709;DP=790;FS=6.217;HRun=2;HaplotypeScore=67.0518;InbreedingCoeff=0.9483;MQ=76.47;MQ0=0;MQRankSum=-7.546;QD=39.59;ReadPosRankSum=3.916;VQSLOD=5.2572;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,49:49:99:2027,141,0	1/1:0,20:20:57.19:821,57,0	0/0:11,0:12:33.09:0,33,395	0/0:18,0:18:41.72:0,42,443	1/1:0,29:30:90.30:1284,90,0	1/1:0,29:29:84.28:1210,84,0	1/1:1,15:16:42.14:605,42,0	1/1:2,29:31:87.28:1232,87,0	1/1:1,23:24:60.20:864,60,0	1/1:0,36:36:99:1449,105,0	1/1:1,29:30:84.28:1209,84,0	1/1:2,28:30:75.25:1080,75,0	1/1:1,33:34:93.31:1338,93,0	1/1:0,25:25:72.24:1037,72,0	1/1:1,31:32:78.26:1123,78,0	1/1:0,32:32:90.30:1296,90,0	1/1:1,39:40:99:1506,102,0	1/1:3,17:20:51.17:733,51,0	1/1:1,26:27:78.26:1121,78,0	1/1:0,37:37:99:1505,111,0	1/1:1,31:32:80.75:1204,81,0	1/1:0,35:35:96.15:1329,96,0	1/1:1,28:29:84.28:1210,84,0	1/1:1,25:26:72.24:1037,72,0	1/1:2,30:32:87.29:1253,87,0	1/1:0,27:27:81.25:1146,81,0	1/1:0,35:35:96.32:1382,96,0	1/1:0,2:2:6.02:86,6,0
chr10	30460556	.	G	GTA	20040.86	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-13.895;DP=631;FS=6.062;HRun=0;HaplotypeScore=69.6370;InbreedingCoeff=0.9965;MQ=84.11;MQ0=7;MQRankSum=-4.354;QD=41.75;ReadPosRankSum=4.998;VQSLOD=6.6393;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,38:37:90.31:1542,90,0	1/1:0,10:10:27.09:463,27,0	0/0:15,0:15:30.10:0,30,392	0/0:23,0:23:46.96:0,47,593	1/1:3,23:28:63.22:1076,63,0	1/1:3,21:23:54.18:926,54,0	1/1:2,19:21:48.16:821,48,0	0/0:32,0:32:75.23:0,75,972	1/1:4,21:25:60.21:1029,60,0	1/1:1,25:26:75.26:1286,75,0	1/1:2,25:26:69.24:1181,69,0	1/1:4,23:27:69.24:1179,69,0	1/1:5,26:31:66.23:1132,66,0	1/1:3,22:25:57.07:977,57,0	1/1:2,23:26:63.22:1080,63,0	1/1:6,22:28:66.23:1128,66,0	0/0:15,0:15:42.14:0,42,552	0/0:9,0:9:24.08:0,24,315	0/0:13,0:13:27.09:0,27,355	0/0:22,0:22:57.18:0,57,748	0/0:22,0:22:57.19:0,57,749	1/1:2,12:15:30.10:514,30,0	1/1:0,17:17:48.16:823,48,0	1/1:1,17:18:48.16:823,48,0	1/1:1,22:23:63.22:1080,63,0	1/1:1,31:32:90.29:1491,90,0	1/1:2,28:30:72.14:1233,72,0	1/1:0,5:5:15.05:257,15,0
chr10	30464182	.	AC	A	22435.82	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=11.200;DP=768;FS=2.932;HRun=1;HaplotypeScore=80.3832;InbreedingCoeff=0.9986;MQ=79.75;MQ0=0;MQRankSum=-3.674;QD=39.99;ReadPosRankSum=5.937;VQSLOD=5.1491;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,52:52:99:2014,144,0	1/1:0,16:16:42.11:586,42,0	0/0:24,0:24:60.22:0,60,1000	0/0:20,0:20:59.87:0,60,904	1/1:0,25:25:72.20:985,72,0	1/1:0,29:29:84.28:1175,84,0	1/1:0,24:24:72.24:1007,72,0	0/0:38,0:38:99:0,111,1728	1/1:0,29:29:84.28:1175,84,0	1/1:0,26:26:78.26:1091,78,0	1/1:0,16:16:48.12:649,48,0	1/1:0,30:30:75.24:1049,75,0	1/1:0,36:36:99:1511,108,0	1/1:0,35:35:96.32:1343,96,0	1/1:0,32:32:87.29:1210,87,0	1/1:0,34:34:99:1385,99,0	0/0:27,0:27:81.28:0,81,1290	0/0:16,0:16:45.15:0,45,710	0/0:23,0:23:66.22:0,66,1045	0/0:16,0:16:48.16:0,48,767	0/0:43,0:43:99:0,126,1962	1/1:0,26:26:78.26:1091,78,0	1/1:0,19:19:54.18:755,54,0	1/1:0,30:30:90.30:1259,90,0	1/1:0,36:36:99:1426,102,0	1/1:0,29:29:87.29:1217,87,0	1/1:0,31:31:90.30:1255,90,0	1/1:0,6:6:18.06:252,18,0
chr10	30467179	.	AGATCACTC	A	29703.04	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=16.695;DP=616;FS=0.000;HRun=0;HaplotypeScore=206.1749;InbreedingCoeff=0.9703;MQ=72.77;MQ0=0;MQRankSum=-18.216;QD=69.40;ReadPosRankSum=4.733;VQSLOD=4.7646;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,25:25:39.05:1019,39,0	1/1:0,13:13:33.11:998,33,0	0/0:12,0:12:36.12:0,36,1416	0/0:21,0:21:63.17:0,63,2215	1/1:0,18:18:38.96:896,39,0	1/1:0,26:26:69.15:2052,69,0	1/1:0,11:11:30.10:907,30,0	0/0:31,0:31:93.32:0,93,3808	1/1:0,30:30:78.23:2255,78,0	1/1:0,23:23:69.19:1976,69,0	1/1:1,23:24:45.02:1147,45,0	1/1:0,25:25:63.22:1905,63,0	1/1:0,24:24:54.19:1634,54,0	1/1:0,26:26:69.24:2016,69,0	1/1:0,19:19:42.14:1201,42,0	1/1:0,26:26:66.23:1976,66,0	0/0:18,0:18:51.18:0,51,2316	0/0:21,0:21:63.22:0,63,2853	0/0:26,0:26:78.27:0,78,3278	0/0:31,0:31:90.31:0,90,4023	0/0:28,0:28:84.29:0,84,3869	1/1:0,20:20:45.11:1290,45,0	1/1:0,15:15:30.44:696,30,0	1/1:0,7:7:3.01:56,3,0	1/1:0,24:24:54.19:1633,54,0	1/1:0,29:29:87.30:2506,87,0	1/1:0,35:35:96.33:2904,96,0	1/1:0,8:8:21.07:636,21,0
chr10	30469820	.	GGGA	G	520.91	PASS	AB=0.945;AC=19;AF=0.413;AN=46;BaseQRankSum=3.423;DP=224;FS=19.191;HRun=0;HaplotypeScore=50.7237;InbreedingCoeff=-0.2547;MQ=24.41;MQ0=37;MQRankSum=0.091;QD=3.69;ReadPosRankSum=4.068;VQSLOD=0.1046;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:15:13.94:0,14,70	0/0:5,0:5:3.95:0,4,43	./.	./.	0/0:5,2:3:0:0,0,0	1/1:10,2:8:9.03:130,9,0	0/1:24,0:17:22.25:22,0,135	0/0:7,1:3:0.47:0,0,1	0/1:10,2:10:14.06:14,0,126	0/1:10,2:8:48.43:48,0,173	./.	0/1:9,0:7:19.45:25,0,19	0/1:5,1:5:18.42:23,0,18	0/1:8,0:7:24.71:25,0,46	0/1:8,1:9:46.94:47,0,59	0/1:12,1:10:60.09:70,0,60	0/1:9,0:6:21.20:21,0,94	0/1:4,0:2:28.12:28,0,43	0/0:4,2:1:2.88:0,3,15	0/0:1,1:1:0.47:0,0,1	./.	1/1:9,0:6:1.93:72,2,0	0/0:1,0:1:0.47:0,0,1	0/0:23,0:19:2.37:0,2,97	1/1:5,0:2:3.01:49,3,0	0/1:7,0:5:26.33:26,0,47	1/1:1,1:2:3.01:46,3,0	./.
chr10	30469826	.	GGGA	G	1159.07	PASS	AB=0.895;AC=24;AF=0.571;AN=42;BaseQRankSum=3.654;DP=196;FS=55.559;HRun=0;HaplotypeScore=41.1200;InbreedingCoeff=-0.2900;MQ=23.45;MQ0=34;MQRankSum=0.151;QD=7.38;ReadPosRankSum=5.347;VQSLOD=0.8173;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:12,0:10:34.47:34,0,47	0/0:5,0:5:3.43:0,3,22	./.	./.	0/0:6,1:3:0:0,0,0	1/1:10,2:7:9.03:131,9,0	0/1:20,2:15:46.60:88,0,47	./.	1/1:9,1:9:1.83:111,2,0	0/1:11,1:7:75.76:103,0,76	./.	0/1:6,2:6:42.05:42,0,57	1/1:3,1:3:5.53:81,6,0	0/1:7,1:7:0.34:47,0,0	0/1:7,1:8:25.89:115,0,26	1/1:9,2:10:0.82:181,1,0	0/1:6,1:3:44.59:45,0,45	0/1:3,1:2:13.18:45,0,13	./.	0/0:2,0:1:0.47:0,0,1	./.	1/1:8,1:6:1.93:68,2,0	0/0:2,0:1:0.47:0,0,1	0/1:16,0:11:32.46:39,0,32	1/1:6,0:2:3.01:49,3,0	0/1:5,1:3:8.86:47,0,9	1/1:1,1:2:3.01:46,3,0	./.
chr10	30469832	.	GGGA	G	1137.46	PASS	AB=0.904;AC=27;AF=0.675;AN=40;BaseQRankSum=4.215;DP=134;FS=69.383;HRun=0;HaplotypeScore=31.5696;InbreedingCoeff=-0.1509;MQ=21.59;MQ0=26;MQRankSum=0.762;QD=10.63;ReadPosRankSum=4.158;VQSLOD=0.6383;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:7,1:6:40.24:40,0,68	0/0:3,0:3:0.89:0,1,2	./.	./.	0/0:4,1:1:0:0,0,0	1/1:6,0:2:6.02:70,6,0	0/1:11,1:9:54.58:82,0,55	0/0:4,1:2:2.98:0,3,22	1/1:4,2:5:8.29:134,8,0	0/1:10,1:6:51.75:99,0,52	./.	0/1:5,0:4:33.04:33,0,45	1/1:3,1:3:6.02:93,6,0	0/1:4,0:3:20.84:29,0,21	0/1:4,2:6:4.24:120,0,4	1/1:5,3:7:15.05:238,15,0	1/1:5,0:2:1.53:48,2,0	1/1:4,0:2:3:51,3,0	./.	./.	./.	1/1:6,0:3:4.28:71,4,0	./.	0/1:9,2:6:4.87:38,0,5	1/1:5,0:2:3:29,3,0	1/1:4,0:1:3.01:33,3,0	1/1:2,0:2:3.01:43,3,0	./.
chr10	30469838	.	GGGA	G	688.73	PASS	AB=0.960;AC=25;AF=0.735;AN=34;BaseQRankSum=3.033;DP=91;FS=59.246;HRun=0;HaplotypeScore=27.6143;InbreedingCoeff=-0.1359;MQ=20.78;MQ0=15;MQRankSum=0.083;QD=9.84;ReadPosRankSum=1.972;VQSLOD=1.0619;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:7,0:5:38.73:39,0,91	./.	./.	./.	0/0:3,0:1:0:0,0,0	1/1:6,0:2:6.01:54,6,0	0/1:8,1:7:43.84:44,0,63	0/0:4,0:2:3.01:0,3,39	1/1:3,1:3:8.95:78,9,0	0/1:8,1:4:41.22:62,0,41	./.	0/1:3,0:3:42.72:47,0,43	1/1:1,2:2:6.02:82,6,0	0/1:3,0:2:24.30:24,0,44	1/1:3,0:3:8.75:85,9,0	1/1:6,0:6:12.33:89,12,0	1/1:3,0:1:3.01:47,3,0	1/1:3,0:1:3.01:31,3,0	./.	./.	./.	./.	./.	1/1:6,0:3:2.43:45,2,0	./.	1/1:3,0:1:3:29,3,0	1/1:2,0:2:3.01:41,3,0	./.
chr10	30469839	.	G	GA	713.56	PASS	AB=0.878;AC=23;AF=0.719;AN=32;BaseQRankSum=3.573;DP=87;FS=59.335;HRun=0;HaplotypeScore=28.7582;InbreedingCoeff=-0.1075;MQ=20.94;MQ0=13;MQRankSum=1.030;QD=10.98;ReadPosRankSum=1.802;VQSLOD=1.6269;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:7,0:5:23.42:23,0,70	./.	./.	./.	./.	1/1:4,2:2:6.02:94,6,0	0/1:7,1:6:67.03:67,0,70	0/0:4,0:2:2.84:0,3,14	1/1:4,0:3:8.76:85,9,0	0/1:8,0:4:15.40:15,0,31	./.	0/1:2,1:3:31.10:31,0,34	1/1:3,0:2:6.01:61,6,0	0/1:2,1:2:30.74:41,0,31	1/1:3,0:3:9.01:91,9,0	1/1:4,2:6:13.86:157,14,0	0/0:3,0:1:2.04:0,2,6	1/1:2,1:1:3.01:47,3,0	./.	./.	./.	./.	./.	1/1:6,0:3:2.96:21,3,0	./.	1/1:2,1:1:3.01:48,3,0	1/1:1,1:2:3.01:41,3,0	./.
chr10	30469844	.	GGGA	G	390.26	PASS	AB=0.921;AC=19;AF=0.633;AN=30;BaseQRankSum=-0.486;DP=71;FS=14.289;HRun=0;HaplotypeScore=26.2609;InbreedingCoeff=-0.1785;MQ=21.26;MQ0=10;MQRankSum=0.702;QD=7.23;ReadPosRankSum=-1.135;VQSLOD=0.4403;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:5,2:5:33.57:34,0,35	./.	./.	./.	./.	1/1:5,0:2:5.05:38,5,0	0/1:7,0:5:4.92:5,0,25	0/0:2,0:1:3.01:0,3,69	0/1:4,0:3:3.56:26,0,4	0/1:5,0:2:34.56:45,0,35	./.	0/1:3,0:3:16.24:16,0,34	1/1:2,0:2:6.02:82,6,0	0/0:3,0:2:0.80:0,1,18	0/1:1,1:2:0.38:41,0,0	0/1:5,0:5:5.27:44,0,5	1/1:0,2:1:3.01:51,3,0	1/1:3,0:1:3.01:53,3,0	./.	./.	./.	./.	./.	1/1:5,1:3:2.43:42,2,0	./.	1/1:3,0:1:2.88:15,3,0	./.	./.
chr10	30469845	.	G	GA	513.38	PASS	AB=0.950;AC=23;AF=0.767;AN=30;BaseQRankSum=3.479;DP=69;FS=55.168;HRun=0;HaplotypeScore=23.0913;InbreedingCoeff=-0.0215;MQ=21.17;MQ0=10;MQRankSum=0.168;QD=9.33;ReadPosRankSum=1.425;VQSLOD=1.3475;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:6,1:5:33.40:33,0,55	./.	./.	./.	./.	1/1:5,0:2:4.30:15,4,0	0/1:6,1:5:31.42:80,0,31	0/0:2,0:1:3.01:0,3,41	1/1:2,2:3:8.77:105,9,0	0/1:5,0:2:8.38:8,0,34	./.	0/1:2,0:2:7.49:7,0,35	1/1:2,0:2:5.97:63,6,0	0/1:3,0:2:1.50:1,0,27	1/1:1,1:2:6.02:77,6,0	1/1:2,3:5:11.91:156,12,0	1/1:2,0:1:2.88:15,3,0	1/1:3,0:1:2.99:23,3,0	./.	./.	./.	./.	./.	1/1:4,1:2:2.99:30,3,0	./.	1/1:3,0:1:1.55:4,2,0	./.	./.
chr10	30470304	.	CAA	C	5668.37	PASS	AB=0.598;AC=44;AF=0.786;AN=56;BaseQRankSum=-0.455;DP=553;FS=8.664;HRun=15;HaplotypeScore=81.9647;InbreedingCoeff=0.1367;MQ=73.11;MQ0=2;MQRankSum=-2.283;QD=10.99;ReadPosRankSum=4.245;VQSLOD=3.4778;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,13:15:17.79:203,18,0	1/1:3,1:5:2.60:56,3,0	0/0:19,0:13:6.01:0,6,62	0/0:18,0:16:6.98:0,7,176	1/1:5,14:19:29.83:264,30,0	0/1:5,15:23:8.49:304,0,8	0/1:10,14:25:0.22:205,0,0	1/1:7,0:29:60.29:259,60,0	0/1:8,15:25:28.14:269,0,28	0/1:8,15:25:15:221,0,15	1/1:6,9:15:17.98:203,18,0	1/1:5,15:23:0.86:186,1,0	1/1:8,22:30:47.69:422,48,0	0/1:10,13:24:3.14:181,0,3	1/1:6,19:25:41.89:370,42,0	1/1:10,20:31:26.01:383,26,0	1/1:2,0:15:24.68:106,25,0	1/1:2,0:9:16.42:71,16,0	1/1:8,0:21:32.09:150,32,0	1/1:3,0:14:21.88:94,22,0	1/1:4,0:22:31.92:140,32,0	1/1:5,7:13:8.77:123,9,0	0/1:5,6:11:6.23:91,0,6	1/1:10,18:28:34.06:453,34,0	0/1:2,6:10:0.30:89,0,0	1/1:12,17:29:53.49:455,53,0	0/1:5,14:19:5.92:159,0,6	1/1:0,9:9:24:211,24,0
chr10	30478426	.	A	AT	11836.12	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=2.246;DP=570;FS=6.483;HRun=8;HaplotypeScore=71.4652;InbreedingCoeff=0.9869;MQ=76.88;MQ0=0;MQRankSum=-2.464;QD=29.08;ReadPosRankSum=4.808;VQSLOD=4.9301;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,19:19:48.14:554,48,0	1/1:1,11:12:30.09:346,30,0	0/0:9,0:9:17.98:0,18,160	0/0:15,0:15:8.83:0,9,250	1/1:5,27:32:75.22:866,75,0	1/1:1,20:22:60.01:672,60,0	1/1:0,9:9:24.07:277,24,0	0/0:39,0:39:87.01:0,87,792	1/1:1,11:13:30.09:346,30,0	1/1:1,15:16:45.12:509,45,0	1/1:2,19:21:51.07:559,51,0	1/1:2,26:28:78.23:900,78,0	1/1:1,15:16:42.12:484,42,0	1/1:2,16:18:42.12:485,42,0	1/1:4,18:22:54.16:623,54,0	1/1:1,25:26:75.22:866,75,0	0/0:22,0:22:63.03:0,63,577	0/0:15,0:15:35.94:0,36,319	0/0:20,0:20:57.03:0,57,521	0/0:29,0:29:81.04:0,81,741	0/0:14,0:14:29.98:0,30,267	1/1:1,15:16:45.13:519,45,0	1/1:6,16:22:29.62:562,30,0	1/1:3,18:21:48.14:554,48,0	1/1:2,19:21:54.16:623,54,0	1/1:6,23:29:20.29:741,20,0	1/1:6,22:28:69.21:796,69,0	1/1:0,16:16:48.14:554,48,0
chr10	30480753	.	CT	C	9229.44	PASS	AB=0.652;AC=51;AF=0.911;AN=56;BaseQRankSum=-2.341;DP=518;FS=27.468;HRun=11;HaplotypeScore=55.7158;InbreedingCoeff=0.2976;MQ=70.13;MQ0=0;MQRankSum=-2.824;QD=18.10;ReadPosRankSum=4.987;VQSLOD=3.8082;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,22:27:31.20:374,31,0	0/1:1,7:8:14:105,0,14	0/1:12,3:14:39.61:40,0,147	0/0:7,0:8:16.82:0,17,149	1/1:4,24:29:70.93:572,71,0	1/1:2,17:19:50.93:418,51,0	1/1:0,10:10:29.97:246,30,0	1/1:7,24:32:7.90:475,8,0	1/1:1,13:14:38.95:320,39,0	1/1:4,20:25:61.96:499,62,0	0/1:3,7:10:14.02:105,0,14	1/1:1,15:16:44.95:369,45,0	1/1:7,17:25:43.96:351,44,0	1/1:3,15:18:9.97:288,10,0	1/1:3,18:21:18.94:362,19,0	1/1:2,22:25:61.97:499,62,0	1/1:3,17:20:44.94:369,45,0	1/1:0,14:14:38.95:320,39,0	1/1:5,14:19:41.88:340,42,0	1/1:2,24:26:40.29:492,40,0	1/1:2,9:11:17.96:148,18,0	1/1:1,13:14:38.95:320,39,0	1/1:3,15:19:25.92:351,26,0	1/1:4,12:16:32.95:271,33,0	1/1:1,16:17:41.95:345,42,0	1/1:5,24:30:71:585,71,0	1/1:1,27:28:74.60:615,75,0	1/1:0,2:2:5.99:49,6,0
chr10	30481022	.	GAAA	G	1556.52	PASS	AB=0.887;AC=26;AF=0.464;AN=56;BaseQRankSum=1.953;DP=582;FS=9.792;HRun=4;HaplotypeScore=149.0109;InbreedingCoeff=-0.1258;MQ=50.79;MQ0=43;MQRankSum=-1.835;QD=3.41;ReadPosRankSum=0.975;VQSLOD=-0.4288;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:21,1:21:20.18:43,0,20	0/0:8,0:7:1.24:0,1,4	0/0:17,0:11:31.85:0,32,470	0/0:24,0:10:19.35:0,19,246	1/1:27,2:25:1.89:55,2,0	0/1:32,1:30:2.06:31,0,2	0/1:19,2:19:0.38:19,0,0	0/1:38,7:44:99:309,0,1578	1/1:18,1:18:4.93:145,5,0	0/1:20,3:24:99:176,0,175	1/1:23,4:25:2.17:69,2,0	0/1:15,0:15:9.97:77,0,10	0/1:30,2:29:14.60:151,0,15	1/1:16,1:15:3.75:69,4,0	0/1:23,1:23:23.50:123,0,23	1/1:17,3:18:0.67:92,1,0	0/1:10,1:11:25.67:26,0,367	0/0:13,0:13:23.93:0,24,415	0/0:28,0:27:50.57:0,51,1405	0/1:18,2:18:10.34:10,0,508	0/0:5,0:4:7.58:0,8,134	0/0:8,0:6:1.82:0,2,8	0/0:18,1:17:0.94:0,1,3	0/1:5,0:6:2.36:47,0,2	1/1:15,1:16:5.38:62,5,0	0/1:23,1:17:67.89:68,0,165	0/1:22,1:20:49.05:75,0,49	0/1:6,1:6:46.06:62,0,46
chr10	30481023	.	A	AG	1960.41	PASS	AB=0.812;AC=30;AF=0.536;AN=56;BaseQRankSum=3.311;DP=567;FS=8.060;HRun=1;HaplotypeScore=136.8263;InbreedingCoeff=0.1401;MQ=51.17;MQ0=43;MQRankSum=-0.446;QD=4.43;ReadPosRankSum=2.854;VQSLOD=0.3489;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:16,6:20:13.07:21,0,13	1/1:6,1:6:2.72:44,3,0	0/0:17,0:11:20.58:0,21,281	0/0:25,0:11:17.92:0,18,187	1/1:26,5:25:5.98:89,6,0	1/1:21,13:30:10.11:197,10,0	1/1:21,1:19:0.25:20,0,0	0/1:39,1:39:99:164,0,920	1/1:10,8:17:10.99:172,11,0	0/1:21,4:25:99:269,0,117	1/1:19,8:25:4.56:85,5,0	1/1:9,7:14:4.36:122,4,0	0/1:24,8:29:8.28:169,0,8	1/1:10,8:15:3.13:34,3,0	0/1:12,12:23:3.48:164,0,3	1/1:16,5:18:1.45:58,1,0	0/0:10,0:10:14.61:0,15,210	0/0:12,0:11:16.83:0,17,209	0/0:26,1:25:23.30:0,23,754	0/0:18,2:18:7:0,7,259	0/0:5,0:4:6.82:0,7,57	0/0:6,2:6:1.55:0,2,6	0/1:18,2:16:0.12:0,0,2	0/1:11,1:6:3.14:22,0,3	1/1:14,4:16:5.22:65,5,0	0/1:15,9:17:99:152,0,111	0/1:13,10:19:23.64:214,0,24	0/1:5,2:6:33.73:63,0,34
chr10	30481025	.	AAGAG	A	4466.12	PASS	AB=0.713;AC=26;AF=0.464;AN=56;BaseQRankSum=1.776;DP=565;FS=17.822;HRun=0;HaplotypeScore=140.9717;InbreedingCoeff=-0.0682;MQ=53.47;MQ0=43;MQRankSum=-5.334;QD=10.97;ReadPosRankSum=-4.612;VQSLOD=1.7746;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:13,10:20:2.49:86,0,2	0/1:4,3:6:41.88:50,0,42	0/0:17,0:11:32.89:0,33,646	0/0:27,0:13:0.97:0,1,309	0/1:12,17:23:7.85:352,0,8	0/1:16,18:30:99:327,0,161	1/1:8,14:20:8.03:90,8,0	0/0:39,0:38:84.71:0,85,1825	0/1:10,8:17:36.04:196,0,36	0/1:12,13:25:99:563,0,190	0/1:16,10:24:22.78:153,0,23	0/1:14,2:14:79.31:186,0,79	0/1:19,13:28:63.98:205,0,64	1/1:12,6:15:14.80:176,15,0	0/1:19,4:22:64.25:406,0,64	1/1:9,12:18:24.36:288,24,0	0/0:10,0:10:26.76:0,27,595	0/0:12,0:11:23.67:0,24,581	0/0:28,0:26:68.99:0,69,1585	0/0:20,0:18:12.05:0,12,719	0/0:5,0:4:5.76:0,6,151	1/1:2,6:6:18.06:248,18,0	1/1:7,13:16:17.96:213,18,0	1/1:10,1:5:0.02:82,0,0	0/1:9,10:17:34.39:104,0,34	0/1:15,11:19:99:466,0,123	0/1:13,8:17:99:182,0,181	0/1:4,3:6:30.20:92,0,30
chr10	30481183	.	TA	T	7412.19	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=8.129;DP=513;FS=7.206;HRun=9;HaplotypeScore=58.8147;InbreedingCoeff=0.9882;MQ=82.88;MQ0=0;MQRankSum=-2.484;QD=21.36;ReadPosRankSum=2.901;VQSLOD=5.7044;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,17:21:45.02:412,45,0	1/1:1,8:9:21.01:192,21,0	0/0:19,1:20:12.27:0,12,252	0/0:22,1:19:19.94:0,20,330	1/1:3,26:29:77.88:700,78,0	1/1:1,13:14:21.01:192,21,0	1/1:2,13:15:36.02:329,36,0	0/0:31,0:31:78.05:0,78,864	1/1:1,10:11:30.02:274,30,0	1/1:0,18:18:48:435,48,0	1/1:3,27:30:74.95:675,75,0	1/1:0,15:16:32.05:280,32,0	1/1:1,20:21:54.03:494,54,0	1/1:2,14:16:33:302,33,0	1/1:4,14:18:42.02:384,42,0	1/1:2,13:15:39.02:357,39,0	0/0:23,0:23:57.16:0,57,649	0/0:23,0:23:54.16:0,54,622	0/0:17,0:17:39.11:0,39,442	0/0:19,0:19:51.15:0,51,586	0/0:10,0:10:24.06:0,24,267	1/1:0,8:8:18:165,18,0	1/1:3,17:20:45.02:412,45,0	1/1:1,5:6:15.01:137,15,0	1/1:3,20:23:51.02:467,51,0	1/1:6,18:24:54.01:491,54,0	1/1:5,16:21:42.02:384,42,0	1/1:0,12:12:36.02:329,36,0
chr10	30482885	.	GT	G	16478.37	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=16.414;DP=637;FS=20.901;HRun=2;HaplotypeScore=120.6102;InbreedingCoeff=0.9994;MQ=84.18;MQ0=0;MQRankSum=-3.743;QD=36.78;ReadPosRankSum=6.285;VQSLOD=2.7533;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,32:32:96.31:1246,96,0	1/1:0,9:9:24.08:312,24,0	0/0:22,0:22:63.20:0,63,884	0/0:22,0:22:65.48:0,65,857	1/1:0,25:24:69.22:896,69,0	1/1:1,19:20:57.18:739,57,0	1/1:1,27:28:81.26:1052,81,0	0/0:29,0:28:72.24:0,72,1056	1/1:0,20:20:60.20:779,60,0	1/1:1,20:21:60.19:772,60,0	1/1:0,18:18:51.15:661,51,0	1/1:1,25:26:75.24:973,75,0	1/1:1,21:22:60.20:779,60,0	1/1:0,23:23:69.22:895,69,0	1/1:0,29:29:84.27:1091,84,0	1/1:1,30:31:81.26:1052,81,0	0/0:29,0:29:87.29:0,87,1304	0/0:9,0:9:27.09:0,27,405	0/0:25,0:25:69.20:0,69,978	0/0:29,0:29:84.28:0,84,1247	0/0:24,0:23:69.23:0,69,1029	1/1:0,19:19:54.18:700,54,0	1/1:0,18:18:51.17:662,51,0	1/1:0,21:21:57.19:740,57,0	1/1:2,17:19:51.17:662,51,0	1/1:2,23:25:69.21:878,69,0	1/1:1,31:32:93.30:1199,93,0	1/1:0,10:10:30.10:390,30,0
chr10	30483122	.	G	GA	18611.94	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-16.161;DP=704;FS=3.190;HRun=4;HaplotypeScore=61.4757;InbreedingCoeff=0.9901;MQ=87.52;MQ0=0;MQRankSum=-2.154;QD=36.93;ReadPosRankSum=5.384;VQSLOD=4.6871;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,31:31:87.29:1190,87,0	1/1:0,10:10:27.07:369,27,0	0/0:24,0:24:60.08:0,60,658	0/0:26,0:26:63.17:0,63,699	1/1:1,33:34:96.28:1292,96,0	1/1:3,16:19:48.16:657,48,0	1/1:2,33:35:93.31:1272,93,0	0/0:39,0:39:93.26:0,93,1055	1/1:2,19:21:54.18:739,54,0	1/1:2,24:26:75.24:1014,75,0	1/1:1,23:24:66.21:889,66,0	1/1:2,33:35:96.32:1313,96,0	1/1:2,27:29:75.25:1026,75,0	1/1:1,30:31:87.29:1190,87,0	1/1:0,25:25:69.23:944,69,0	1/1:1,28:29:75.25:1026,75,0	0/0:28,0:28:78.22:0,78,885	0/0:22,0:22:66.19:0,66,749	0/0:18,0:18:54.15:0,54,608	0/0:27,0:27:80.24:0,80,881	0/0:16,0:16:42.12:0,42,476	1/1:1,26:27:75.25:1026,75,0	1/1:1,18:19:51.17:698,51,0	1/1:0,20:20:57.19:780,57,0	1/1:3,29:32:81.27:1108,81,0	1/1:2,29:31:87.28:1175,87,0	1/1:3,19:22:57.19:780,57,0	1/1:0,4:4:9.03:123,9,0
chr10	30483198	.	G	GACA	5772.65	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-11.978;DP=685;FS=0.000;HRun=0;HaplotypeScore=104.5144;InbreedingCoeff=0.9885;MQ=69.76;MQ0=1;MQRankSum=-0.976;QD=35.42;ReadPosRankSum=-1.361;VQSLOD=4.7202;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:25:59.83:0,60,792	0/0:7,0:7:14.69:0,15,214	0/0:18,0:16:11.95:0,12,136	0/0:18,0:18:20.31:0,20,279	0/0:28,0:28:72.04:0,72,953	0/0:26,0:26:63.17:0,63,861	0/0:20,0:20:36.10:0,36,496	1/1:22,22:45:54.26:1352,54,0	0/0:25,0:25:63.19:0,63,873	0/0:30,0:30:69.21:0,69,944	0/0:18,0:18:36.07:0,36,475	0/0:28,0:28:65.76:0,66,917	0/0:24,0:24:48.14:0,48,668	0/0:29,0:29:69.22:0,69,969	0/0:29,0:29:66.22:0,66,944	0/0:22,0:22:57.17:0,57,796	1/1:6,28:35:35.32:1482,35,0	1/1:11,17:28:51.17:1015,51,0	1/1:11,8:18:30.08:551,30,0	1/1:4,16:22:42.03:763,42,0	1/1:3,11:14:30.10:610,30,0	0/0:26,0:26:66.18:0,66,906	0/0:24,0:24:59.71:0,60,788	0/0:31,0:31:72.19:0,72,989	0/0:24,0:24:57.08:0,57,768	0/0:33,0:33:72.22:0,72,996	0/0:27,0:27:72.19:0,72,974	0/0:10,0:10:24.04:0,24,321
chr10	30485765	.	GC	G	21664.08	PASS	AB=1.000;AC=53;AF=0.946;AN=56;BaseQRankSum=-4.910;DP=745;FS=2.611;HRun=5;HaplotypeScore=74.4118;InbreedingCoeff=0.6934;MQ=78.90;MQ0=0;MQRankSum=-8.601;QD=29.80;ReadPosRankSum=3.842;VQSLOD=5.5559;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,48:52:99:1389,123,0	1/1:1,5:6:15.04:170,15,0	0/0:18,0:18:46.83:0,47,567	0/1:15,0:15:8.68:9,0,307	1/1:1,20:21:54.11:598,54,0	1/1:0,23:23:69.20:782,69,0	1/1:2,34:36:93.26:1055,93,0	1/1:3,35:38:99:1156,102,0	1/1:0,26:26:72.21:816,72,0	1/1:2,38:40:99:1281,114,0	1/1:0,21:21:57.16:647,57,0	1/1:0,24:24:72.21:816,72,0	1/1:0,34:34:99:1121,99,0	1/1:1,23:24:63.18:714,63,0	1/1:0,29:29:84.24:953,84,0	1/1:0,42:42:99:1327,117,0	1/1:2,29:31:78.22:884,78,0	1/1:0,13:13:36.10:408,36,0	1/1:0,18:18:54.15:610,54,0	1/1:1,18:19:51.08:560,51,0	1/1:3,28:31:81.23:919,81,0	1/1:1,35:36:99:1189,105,0	1/1:1,23:24:57.16:646,57,0	1/1:2,32:34:84.24:953,84,0	1/1:0,20:20:57.16:646,57,0	1/1:3,27:30:81.18:893,81,0	1/1:0,23:23:60.17:680,60,0	1/1:2,15:17:39.11:442,39,0
chr10	30487638	.	CT	C	2929.33	PASS	AB=0.641;AC=36;AF=0.643;AN=56;BaseQRankSum=-5.927;DP=569;FS=1.027;HRun=15;HaplotypeScore=70.9323;InbreedingCoeff=0.5884;MQ=75.44;MQ0=3;MQRankSum=-1.132;QD=7.71;ReadPosRankSum=6.766;VQSLOD=2.7179;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:9,13:23:0.71:115,0,1	1/1:1,11:13:25.67:160,26,0	0/0:34,0:19:11.43:0,11,100	0/0:16,0:13:5.16:0,5,62	1/1:10,15:25:26.27:172,26,0	1/1:6,14:22:22.62:139,23,0	0/1:4,11:15:26.12:108,0,26	0/0:24,2:42:34.11:0,34,263	1/1:5,9:14:3.11:114,3,0	0/1:18,9:30:22.07:103,0,22	0/1:7,8:15:27.22:75,0,27	1/1:4,9:13:17.55:112,18,0	1/1:7,9:16:14.51:96,15,0	1/1:4,8:12:14.71:96,15,0	1/1:3,16:19:49.28:313,49,0	1/1:4,13:19:30.64:185,31,0	0/0:9,0:29:27.28:0,27,164	0/0:5,0:16:14.34:0,14,78	0/0:5,0:14:29.54:0,30,171	0/0:10,0:28:56.34:0,56,306	0/0:4,0:8:4.23:0,4,26	1/1:4,11:16:22.17:151,22,0	1/1:5,18:23:35.22:230,35,0	1/1:8,9:19:1.87:100,2,0	1/1:4,12:19:29.65:171,30,0	1/1:6,12:19:28.38:170,28,0	1/1:15,14:29:58.42:368,58,0	1/1:6,12:19:3.06:146,3,0
chr10	30488559	.	G	GAAAAACA	35128.46	PASS	AB=0.618;AC=51;AF=0.911;AN=56;BaseQRankSum=-5.883;DP=742;FS=0.721;HRun=0;HaplotypeScore=139.3278;InbreedingCoeff=0.7369;MQ=62.18;MQ0=1;MQRankSum=-8.114;QD=50.47;ReadPosRankSum=3.213;VQSLOD=4.6845;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:19,18:38:32.10:1216,32,0	1/1:6,5:11:15.05:562,15,0	0/0:29,0:29:39.51:0,40,740	0/0:16,0:16:31.78:0,32,717	1/1:7,21:29:57.12:1679,57,0	1/1:11,22:33:48.16:1731,48,0	1/1:10,6:19:15.05:562,15,0	1/1:20,19:43:70.48:1963,70,0	1/1:8,17:26:36.12:1348,36,0	1/1:7,25:33:75.24:2309,75,0	1/1:6,18:26:48.04:1336,48,0	1/1:8,21:30:54.19:2004,54,0	1/1:5,17:23:33.11:1220,33,0	1/1:7,22:33:45.15:1669,45,0	1/1:7,19:29:39.13:1461,39,0	1/1:13,27:41:69.24:2583,69,0	1/1:7,10:20:12.04:450,12,0	1/1:8,0:8:9.03:260,9,0	1/1:8,11:20:36.12:1034,36,0	1/1:4,22:26:57.20:1975,57,0	1/1:8,9:22:30.10:1046,30,0	1/1:6,20:27:48.12:1535,48,0	1/1:5,14:19:23.76:861,24,0	1/1:13,11:24:18.06:667,18,0	1/1:14,22:37:45.15:1648,45,0	1/1:9,16:26:42.12:1375,42,0	1/1:7,22:30:57.20:2099,57,0	0/1:8,12:21:27.88:538,0,28
chr10	30489172	.	G	GAT	23448.59	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-16.558;DP=703;FS=5.407;HRun=0;HaplotypeScore=71.4844;InbreedingCoeff=0.9999;MQ=85.63;MQ0=1;MQRankSum=-3.578;QD=46.62;ReadPosRankSum=6.881;VQSLOD=5.6828;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,31:33:81.28:1485,81,0	1/1:2,10:13:30.10:550,30,0	0/0:23,0:23:60.20:0,60,857	0/0:22,0:22:51.07:0,51,669	1/1:1,32:33:90.31:1650,90,0	1/1:1,25:28:69.24:1265,69,0	1/1:0,20:20:57.20:1045,57,0	0/0:29,0:29:84.25:0,84,1123	1/1:1,15:17:45.15:825,45,0	1/1:1,33:34:99:1811,99,0	1/1:0,25:25:72.25:1319,72,0	1/1:1,18:19:45.15:825,45,0	1/1:0,21:22:60.21:1100,60,0	1/1:4,18:23:48.16:880,48,0	1/1:1,32:33:90.31:1650,90,0	1/1:1,24:26:60.16:1100,60,0	0/0:25,0:25:72.22:0,72,1011	0/0:22,0:22:57.16:0,57,795	0/0:18,0:18:45.14:0,45,628	0/0:32,0:32:93.31:0,93,1332	0/0:29,0:29:84.27:0,84,1185	1/1:0,19:20:51.17:935,51,0	1/1:1,24:25:60.21:1100,60,0	1/1:2,21:23:57.20:1045,57,0	1/1:4,29:32:69.24:1265,69,0	1/1:2,28:30:81.26:1455,81,0	1/1:2,29:31:84.29:1539,84,0	1/1:0,14:14:33.11:605,33,0
chr10	30489643	.	T	TGGTGTAGAATAAACTACATCCCAT	49364.24	PASS	AB=0.714;AC=54;AF=0.964;AN=56;BaseQRankSum=-0.799;DP=327;FS=31.165;HRun=0;HaplotypeScore=372.9686;InbreedingCoeff=-0.0510;MQ=62.62;MQ0=0;MQRankSum=-3.270;QD=150.96;ReadPosRankSum=2.718;VQSLOD=3.3877;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:21:42.08:2421,42,0	1/1:6,0:6:18.06:1710,18,0	0/1:6,0:10:21.19:1169,0,21	0/1:3,1:5:36.54:543,0,37	1/1:18,0:18:33.11:1760,33,0	1/1:13,0:13:30.10:2115,30,0	1/1:15,0:15:42.14:2936,42,0	1/1:9,0:9:27.09:1286,27,0	1/1:9,0:9:18.06:1502,18,0	1/1:13,0:13:32.88:1673,33,0	1/1:14,0:14:39.09:2236,39,0	1/1:11,0:11:18.05:1201,18,0	1/1:5,0:5:6.02:635,6,0	1/1:9,0:9:21.03:1528,21,0	1/1:14,0:14:36.11:2265,36,0	1/1:19,0:19:54.17:3553,54,0	1/1:5,0:5:9.92:654,10,0	1/1:5,0:5:8.99:513,9,0	1/1:10,0:10:27.97:1569,28,0	1/1:26,0:26:60.21:3431,60,0	1/1:2,0:2:6.02:247,6,0	1/1:15,0:15:39.13:2741,39,0	1/1:13,0:13:33.07:1759,33,0	1/1:13,0:13:27.09:1498,27,0	1/1:15,0:15:36.12:2335,36,0	1/1:11,0:11:33.11:1926,33,0	1/1:16,0:16:42.13:2922,42,0	1/1:5,0:5:12.04:1236,12,0
chr10	30490352	.	CTG	C	3425.75	PASS	AB=0.738;AC=29;AF=0.518;AN=56;BaseQRankSum=3.499;DP=532;FS=7.528;HRun=0;HaplotypeScore=177.4020;InbreedingCoeff=-0.2248;MQ=37.87;MQ0=10;MQRankSum=2.958;QD=8.08;ReadPosRankSum=0.954;VQSLOD=2.9566;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:16,6:21:9.01:109,9,0	0/1:5,6:11:31.79:188,0,32	0/0:26,0:16:38.11:0,38,606	0/0:46,1:22:35.38:0,35,684	1/1:5,20:25:14.86:215,15,0	0/1:7,6:13:16.50:37,0,17	0/1:13,12:23:90.98:91,0,156	0/1:29,0:27:38.54:39,0,809	0/1:9,7:16:32.16:73,0,32	0/1:16,11:25:99:410,0,154	0/1:5,5:10:16.51:37,0,17	1/1:9,19:25:12.90:433,13,0	0/1:7,6:10:8.02:45,0,8	0/1:16,7:21:21.10:186,0,21	1/1:8,8:14:9.01:101,9,0	1/1:10,5:13:18.60:205,19,0	0/0:5,0:4:1.78:0,2,5	0/1:6,0:6:16.53:20,0,17	0/0:18,0:18:29.71:0,30,359	0/1:14,0:13:4.24:4,0,110	0/0:11,0:9:11.73:0,12,79	0/1:7,6:13:12.87:37,0,13	0/1:6,10:16:6.74:156,0,7	1/1:15,12:27:5.90:86,6,0	0/1:8,9:17:12.69:228,0,13	0/1:25,13:35:99:506,0,356	0/1:7,7:14:80.69:145,0,81	0/1:2,2:4:12.79:76,0,13
chr10	30490358	.	G	GTCTCTC	5996.98	PASS	AB=1.000;AC=47;AF=0.839;AN=56;BaseQRankSum=0.920;DP=535;FS=9.892;HRun=0;HaplotypeScore=199.3635;InbreedingCoeff=0.4101;MQ=43.80;MQ0=11;MQRankSum=1.895;QD=13.18;ReadPosRankSum=1.219;VQSLOD=2.8179;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:21:5.89:86,6,0	1/1:10,0:10:18.01:305,18,0	0/0:27,0:12:19.77:0,20,323	0/0:47,0:20:0.61:0,1,294	1/1:27,0:27:22.89:304,23,0	1/1:14,0:14:6:67,6,0	1/1:28,0:26:18.01:193,18,0	0/1:30,0:28:12.11:267,0,12	1/1:15,0:15:11.97:127,12,0	1/1:31,0:29:54.03:900,54,0	1/1:10,0:10:3.01:43,3,0	1/1:24,1:22:33.11:626,33,0	1/1:15,0:13:6.01:83,6,0	1/1:20,0:18:18.03:264,18,0	1/1:16,1:15:12.03:242,12,0	1/1:16,0:14:12.03:199,12,0	0/0:6,0:5:4.76:0,5,42	1/1:6,0:6:3.44:21,3,0	1/1:14,0:14:9.57:126,10,0	1/1:15,0:14:6.49:34,6,0	0/1:12,0:10:0:0,0,0	1/1:12,1:13:9.43:87,9,0	1/1:14,0:14:12.04:200,12,0	1/1:26,0:25:6.29:88,6,0	1/1:16,0:16:18.06:305,18,0	1/1:38,2:36:64.68:1179,65,0	1/1:15,0:15:6.50:162,6,0	0/1:4,0:4:0.59:86,0,1
chr10	30492404	.	CA	C	13202.35	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=8.214;DP=554;FS=4.140;HRun=1;HaplotypeScore=76.1110;InbreedingCoeff=0.9967;MQ=93.08;MQ0=4;MQRankSum=-6.952;QD=35.78;ReadPosRankSum=7.410;VQSLOD=4.3874;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,24:24:60.20:837,60,0	1/1:1,6:7:18.06:250,18,0	0/0:29,0:28:75.22:0,75,1074	0/0:37,0:34:99:0,99,1275	1/1:0,18:18:42.14:586,42,0	1/1:0,10:10:27.05:354,27,0	1/1:0,27:26:69.23:958,69,0	0/0:27,0:27:81.25:0,81,1148	1/1:1,15:16:41.92:470,42,0	1/1:0,27:27:81.20:1057,81,0	1/1:0,13:13:36.12:503,36,0	1/1:0,17:17:45.10:599,45,0	1/1:0,14:14:42.14:586,42,0	1/1:0,17:17:48.16:668,48,0	1/1:1,24:25:63.10:828,63,0	1/1:1,21:22:60.19:822,60,0	0/0:18,0:17:45.14:0,45,644	0/0:11,0:11:17.07:0,17,308	0/0:15,0:14:42.09:0,42,537	0/0:24,0:24:69.19:0,69,963	0/0:24,0:23:59.35:0,59,830	1/1:0,22:22:56.42:750,56,0	1/1:2,15:17:36.12:502,36,0	1/1:1,23:24:59.91:818,60,0	1/1:1,20:21:54.07:699,54,0	1/1:0,17:17:48.16:664,48,0	1/1:0,17:17:51.10:666,51,0	1/1:0,14:14:42.14:586,42,0
chr10	30492434	.	T	TACAC	5761.87	PASS	AB=0.964;AC=45;AF=0.865;AN=52;BaseQRankSum=-2.499;DP=614;FS=1.059;HRun=0;HaplotypeScore=168.8370;InbreedingCoeff=0.6086;MQ=62.34;MQ0=4;MQRankSum=-0.586;QD=11.41;ReadPosRankSum=1.210;VQSLOD=4.3979;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:30,1:30:15:204,15,0	0/0:6,0:7:5.96:0,6,47	./.	./.	1/1:14,1:16:20.75:250,21,0	1/1:9,3:13:20.52:315,21,0	1/1:21,3:25:16.17:311,16,0	1/1:31,0:31:4.73:58,5,0	1/1:22,3:26:29.58:429,30,0	0/0:22,0:22:5.12:0,5,70	0/0:18,0:18:17.90:0,18,206	1/1:16,2:18:12.03:214,12,0	1/1:16,1:17:24.01:361,24,0	1/1:17,3:20:21.05:377,21,0	1/1:25,2:29:22.31:291,22,0	1/1:18,1:19:7.40:128,7,0	1/1:13,6:21:12.04:210,12,0	1/1:13,0:13:14.70:197,15,0	1/1:19,3:20:8.99:154,9,0	1/1:24,0:23:21.06:379,21,0	1/1:18,9:25:6.02:141,6,0	1/1:22,1:23:23.70:329,24,0	1/1:13,4:17:15.05:300,15,0	1/1:28,2:33:23.53:352,24,0	0/1:26,0:27:56.78:57,0,118	1/1:20,0:20:31.41:388,31,0	1/1:18,0:17:10.82:109,11,0	1/1:11,0:12:17.76:209,18,0
chr10	30493621	.	T	TGTG	5239.28	PASS	AB=0.991;AC=32;AF=0.571;AN=56;BaseQRankSum=-2.430;DP=669;FS=12.745;HRun=0;HaplotypeScore=144.8471;InbreedingCoeff=0.3807;MQ=53.65;MQ0=80;MQRankSum=1.607;QD=12.02;ReadPosRankSum=3.028;VQSLOD=3.6192;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:18:33.75:180,0,34	1/1:11,3:10:17.55:385,18,0	0/0:40,0:22:50.97:0,51,587	0/0:35,0:18:15.42:0,15,468	1/1:18,1:13:25.64:374,26,0	1/1:24,0:20:23.92:283,24,0	1/1:23,2:20:27.52:308,28,0	0/0:43,0:40:76.43:0,76,871	0/1:18,0:15:0.41:250,0,0	0/1:18,0:11:24.03:99,0,24	1/1:15,1:15:8.62:126,9,0	0/1:38,0:30:10.51:573,0,11	1/1:15,0:13:17.18:220,17,0	0/1:20,0:13:15.25:221,0,15	0/1:25,1:21:29.70:328,0,30	1/1:23,0:19:1.43:148,1,0	0/0:16,0:13:26.87:0,27,315	0/0:15,0:15:32.98:0,33,365	0/0:29,0:27:39.36:0,39,418	0/0:20,0:20:31.04:0,31,549	0/0:35,0:29:21.14:0,21,249	0/1:26,1:19:37.27:304,0,37	0/1:17,0:14:9.32:135,0,9	1/1:29,4:24:18.18:487,18,0	1/1:23,0:19:10.77:181,11,0	1/1:22,0:17:10.61:369,11,0	1/1:20,1:15:10.08:257,10,0	1/1:10,0:6:2.33:11,2,0
chr10	30493623	.	T	TG	4481.98	PASS	AB=0.897;AC=25;AF=0.446;AN=56;BaseQRankSum=-0.853;DP=682;FS=3.741;HRun=1;HaplotypeScore=121.0377;InbreedingCoeff=-0.0903;MQ=51.66;MQ0=83;MQRankSum=3.192;QD=9.92;ReadPosRankSum=4.162;VQSLOD=2.9675;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:27,2:20:19.25:187,0,19	1/1:10,4:10:3.92:187,4,0	0/0:38,0:20:51.01:0,51,602	0/0:35,0:18:30.64:0,31,493	1/1:18,4:16:26.86:333,27,0	0/1:27,3:26:99:233,0,103	0/1:21,3:19:7.60:259,0,8	0/0:43,0:40:96.64:0,97,972	0/1:18,1:16:20.57:229,0,21	0/1:15,3:11:53.22:53,0,90	0/1:16,1:16:13.07:87,0,13	0/1:33,5:30:91.59:468,0,92	0/1:14,1:13:63.81:218,0,64	0/1:18,2:13:11.56:197,0,12	0/1:23,5:23:46.98:293,0,47	0/1:18,5:19:2.39:255,0,2	0/0:16,0:13:32.64:0,33,360	0/0:15,0:15:20.25:0,20,339	0/0:26,0:24:57.90:0,58,516	0/0:20,0:20:45.11:0,45,559	0/0:37,0:30:22.24:0,22,265	0/1:20,7:19:48.18:285,0,48	0/1:16,2:14:21.26:141,0,21	1/1:30,3:24:32.37:416,32,0	1/1:6,17:19:11.06:131,11,0	0/1:20,2:17:54.94:308,0,55	0/1:20,1:15:22.06:191,0,22	1/1:10,1:6:2.30:11,2,0
chr10	30493624	.	GT	G	3510.96	PASS	AB=0.754;AC=24;AF=0.429;AN=56;BaseQRankSum=-0.161;DP=682;FS=3.210;HRun=1;HaplotypeScore=121.0890;InbreedingCoeff=-0.2010;MQ=49.86;MQ0=84;MQRankSum=3.457;QD=7.73;ReadPosRankSum=3.645;VQSLOD=1.2524;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:17,12:20:28.31:187,0,28	0/1:12,2:10:27.33:43,0,27	0/0:38,0:20:51.01:0,51,602	0/0:33,0:16:30.64:0,31,493	1/1:15,8:17:21.40:282,21,0	0/1:23,7:26:99:205,0,138	0/1:13,11:19:44.47:291,0,44	0/0:43,0:40:97.90:0,98,1038	0/1:14,5:16:29.75:233,0,30	0/1:15,4:11:43.43:43,0,162	0/1:16,2:17:26.76:87,0,27	0/1:22,14:28:99:334,0,208	0/1:8,7:13:40.35:185,0,40	0/1:13,8:14:24.76:142,0,25	0/1:17,10:22:68.72:216,0,69	0/1:14,11:21:9.71:194,0,10	0/0:16,0:13:32.69:0,33,398	0/0:15,0:15:34.87:0,35,364	0/0:26,0:24:57.90:0,58,525	0/0:20,0:20:45.02:0,45,537	0/0:37,0:30:21.20:0,21,260	0/1:19,8:19:70.22:149,0,70	0/1:13,5:14:44.76:87,0,45	1/1:20,14:25:25.50:320,26,0	1/1:23,0:19:9.79:50,10,0	0/1:12,10:17:99:278,0,128	0/1:10,9:13:47.17:175,0,47	1/1:9,2:6:1.79:11,2,0
chr10	30493670	.	GTAT	G	418.48	PASS	AB=0.940;AC=14;AF=0.259;AN=54;BaseQRankSum=-1.919;DP=583;FS=21.572;HRun=0;HaplotypeScore=200.5109;InbreedingCoeff=-0.3172;MQ=31.44;MQ0=52;MQRankSum=3.474;QD=1.59;ReadPosRankSum=-2.785;VQSLOD=0.9459;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:25,3:25:25.04:25,0,142	0/1:10,1:11:77.06:77,0,96	0/0:41,0:3:9.03:0,9,176	0/0:31,0:2:6.02:0,6,121	0/0:17,0:15:4:0,4,135	0/0:25,0:23:11.03:0,11,369	0/0:22,2:17:16.74:0,17,358	0/0:40,0:31:62.68:0,63,1142	0/1:24,0:23:37.30:37,0,200	0/1:17,2:16:52.57:53,0,583	0/1:17,2:18:31.41:31,0,105	0/1:23,1:22:3.57:4,0,593	0/0:12,1:14:20.80:0,21,338	0/1:16,0:13:7.43:7,0,236	0/0:25,1:21:10.77:0,11,183	0/0:22,0:20:22.50:0,22,393	0/1:9,4:13:54.97:55,0,231	0/0:12,0:12:17.64:0,18,356	0/0:17,0:13:33.28:0,33,621	0/1:18,0:17:5.44:102,0,5	0/0:26,2:24:3.95:0,4,107	0/1:19,2:20:87.48:87,0,150	0/0:18,1:16:7.26:0,7,266	0/1:24,1:21:6.02:6,0,70	0/1:19,0:18:59.02:59,0,72	0/1:12,0:11:0.14:0,0,332	0/1:12,0:10:14.76:15,0,277	./.
chr10	30493694	.	TA	T	2286.69	PASS	AB=0.958;AC=42;AF=0.808;AN=52;BaseQRankSum=-2.048;DP=429;FS=8.736;HRun=1;HaplotypeScore=209.8544;InbreedingCoeff=-0.2962;MQ=29.00;MQ0=22;MQRankSum=-2.791;QD=5.60;ReadPosRankSum=2.085;VQSLOD=0.0420;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:20,3:22:21.12:34,0,21	1/1:7,0:7:8.40:62,8,0	./.	./.	1/1:16,0:15:5.15:60,5,0	0/1:18,1:17:21.50:77,0,22	1/1:20,0:13:11.40:66,11,0	0/1:30,0:18:34.77:195,0,35	1/1:20,1:20:5.52:132,6,0	1/1:17,0:16:20.46:243,20,0	1/1:12,0:12:8.59:75,9,0	0/1:17,2:18:0.07:105,0,0	1/1:15,0:15:3.17:115,3,0	0/1:11,0:10:26.19:77,0,26	1/1:25,0:20:4.57:50,5,0	1/1:12,0:12:12.98:68,13,0	1/1:11,0:11:1.25:98,1,0	1/1:12,0:12:22.42:147,22,0	1/1:16,0:14:35.70:268,36,0	0/1:15,0:14:6.26:39,0,6	1/1:19,0:15:2.93:18,3,0	0/1:12,0:12:36.56:41,0,37	0/1:12,1:12:12.06:42,0,12	1/1:13,2:13:5.23:33,5,0	0/1:20,0:20:2.13:67,0,2	0/1:9,1:8:30.51:117,0,31	1/1:13,0:12:0.55:141,1,0	1/1:4,0:2:5.96:44,6,0
chr10	30493697	.	T	TG	3179.08	PASS	AB=0.694;AC=41;AF=0.788;AN=52;BaseQRankSum=-3.532;DP=415;FS=14.854;HRun=0;HaplotypeScore=215.6922;InbreedingCoeff=-0.3123;MQ=28.64;MQ0=17;MQRankSum=-3.466;QD=7.87;ReadPosRankSum=-2.969;VQSLOD=1.9350;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:15,6:20:46.76:49,0,47	1/1:2,5:7:8.74:59,9,0	./.	./.	1/1:7,9:15:0.41:30,0,0	0/1:7,9:14:21.10:88,0,21	1/1:11,9:13:11.66:90,12,0	1/1:25,1:14:35.13:284,35,0	0/1:9,12:20:18.33:148,0,18	1/1:7,10:16:6.54:340,7,0	1/1:4,8:12:9.23:105,9,0	0/1:9,11:19:8.56:198,0,9	0/1:4,10:14:10.20:164,0,10	1/1:2,7:8:12.04:161,12,0	1/1:11,15:21:15.27:101,15,0	1/1:5,8:13:12.91:94,13,0	1/1:8,2:10:16.39:114,16,0	1/1:10,3:13:26.85:227,27,0	1/1:13,3:14:35.76:295,36,0	0/1:15,2:16:20.86:91,0,21	1/1:15,3:15:2.42:14,2,0	0/1:7,6:13:64.64:78,0,65	0/1:6,9:14:28.95:39,0,29	1/1:9,6:13:3.57:20,4,0	0/1:10,11:21:19.13:105,0,19	0/1:8,3:9:18.50:146,0,18	0/1:8,6:12:6.26:210,0,6	1/1:0,3:2:6.01:69,6,0
chr10	30493702	.	T	TA	1345.29	PASS	AB=0.969;AC=25;AF=0.481;AN=52;BaseQRankSum=3.926;DP=432;FS=1.277;HRun=0;HaplotypeScore=231.0975;InbreedingCoeff=-0.7125;MQ=28.14;MQ0=17;MQRankSum=-0.582;QD=3.43;ReadPosRankSum=-1.429;VQSLOD=3.1420;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:21:66.18:95,0,66	0/1:7,0:7:5.27:71,0,5	./.	./.	1/1:16,0:15:0.79:15,1,0	0/1:14,1:12:70.14:70,0,70	0/1:21,0:14:35.31:35,0,49	0/1:26,0:14:8.60:9,0,368	0/1:22,0:21:65.86:111,0,66	0/1:19,0:17:10.17:10,0,449	0/1:13,0:13:68.10:68,0,83	0/1:17,2:18:60.63:61,0,118	0/1:13,0:14:27.23:90,0,27	0/1:9,0:8:9.54:62,0,10	0/1:24,0:21:12.98:188,0,13	0/1:12,0:13:30.97:58,0,31	0/1:10,0:10:21.18:21,0,119	0/0:13,0:13:25.56:0,26,255	0/0:21,0:17:11.27:0,11,430	0/1:16,0:16:38.48:38,0,46	0/1:19,0:15:0.40:0,0,0	0/1:15,1:17:46.73:47,0,146	0/1:15,2:16:31.60:32,0,34	0/1:14,1:13:12.19:26,0,12	0/1:22,1:23:33.57:197,0,34	0/1:12,1:11:58.50:58,0,256	0/1:13,0:11:95.63:96,0,168	0/1:6,0:5:27.84:28,0,35
chr10	30493704	.	T	TA	678.57	PASS	AB=0.971;AC=25;AF=0.481;AN=52;BaseQRankSum=3.161;DP=434;FS=0.625;HRun=0;HaplotypeScore=237.6004;InbreedingCoeff=-0.4591;MQ=28.87;MQ0=17;MQRankSum=-0.943;QD=1.95;ReadPosRankSum=0.747;VQSLOD=2.8122;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:21:1.21:0,1,107	0/1:7,0:7:8.74:26,0,9	./.	./.	0/1:17,0:16:1.92:13,0,2	0/1:15,0:12:13.66:14,0,52	1/1:19,0:12:5.05:44,5,0	0/0:24,0:14:7.95:0,8,348	0/1:21,1:21:25.08:25,0,78	0/0:20,0:18:9.25:0,9,301	0/1:12,0:13:13.01:13,0,96	0/1:19,0:18:32.63:33,0,58	0/1:14,0:14:32.10:32,0,38	1/1:9,0:9:11.98:112,12,0	1/1:26,0:22:6.31:57,6,0	0/1:14,0:14:21.36:47,0,21	0/1:8,2:10:75.02:75,0,115	0/1:12,1:13:36.50:36,0,181	0/1:20,0:16:18.48:18,0,305	0/1:14,3:16:32.88:110,0,33	0/1:19,1:16:0.41:0,0,0	0/1:18,0:18:16.30:16,0,184	0/1:17,0:16:15.61:16,0,55	0/0:15,0:13:5.24:0,5,27	0/1:21,0:23:75.98:76,0,80	0/1:15,0:13:14.13:14,0,183	0/1:12,0:11:31.03:31,0,104	0/1:6,0:5:15.51:16,0,16
chr10	30493707	.	G	GTGT	2590.01	PASS	AB=0.976;AC=35;AF=0.673;AN=52;BaseQRankSum=-1.268;DP=419;FS=32.388;HRun=0;HaplotypeScore=226.4327;InbreedingCoeff=-0.4176;MQ=29.42;MQ0=15;MQRankSum=-5.918;QD=6.23;ReadPosRankSum=4.817;VQSLOD=1.1535;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:21,0:20:64.09:64,0,82	1/1:8,0:8:9:90,9,0	./.	./.	0/1:17,0:16:3.94:51,0,4	0/1:13,0:11:42.32:48,0,42	0/1:16,0:11:10.92:32,0,11	1/1:23,0:15:35.92:392,36,0	0/1:21,0:20:42.26:65,0,42	0/1:20,0:18:74.72:167,0,75	1/1:13,0:14:7.36:66,7,0	0/1:16,0:16:35.54:56,0,36	0/1:14,0:14:23.59:94,0,24	1/1:10,0:9:11.66:84,12,0	1/1:26,0:22:14.81:129,15,0	1/1:12,0:13:5.29:74,5,0	0/1:8,2:10:11.24:98,0,11	1/1:10,2:12:1.66:266,2,0	1/1:12,2:11:24.55:382,25,0	0/1:16,2:17:37.13:178,0,37	0/1:18,1:15:0:1,0,0	0/1:18,0:18:12.94:13,0,134	0/1:17,0:16:10.68:11,0,64	0/1:13,0:13:1.73:6,0,2	0/1:23,0:23:48.69:116,0,49	0/1:13,0:12:90.60:91,0,97	0/1:12,0:10:31.89:120,0,32	1/1:6,0:5:5.91:38,6,0
chr10	30493712	.	T	TA	587.21	PASS	AB=0.840;AC=6;AF=0.111;AN=54;BaseQRankSum=-2.815;DP=438;FS=8.893;HRun=0;HaplotypeScore=223.1464;InbreedingCoeff=0.0966;MQ=30.34;MQ0=15;MQRankSum=-3.099;QD=7.63;ReadPosRankSum=0.840;VQSLOD=2.1431;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:23:20.61:0,21,180	0/0:8,0:8:9.27:0,9,57	./.	0/0:5,0:1:3:0,3,26	0/0:18,0:17:11.93:0,12,98	0/0:14,0:11:10.35:0,10,72	0/0:17,0:12:8.93:0,9,78	0/1:17,9:18:99:242,0,241	0/0:21,0:20:18.54:0,19,135	0/0:19,0:17:50.87:0,51,502	0/0:16,0:16:14.46:0,14,128	0/0:18,0:17:9.77:0,10,98	0/0:15,0:15:17.18:0,17,150	0/0:13,0:12:14.26:0,14,103	0/0:26,0:22:13.58:0,14,78	0/0:12,0:12:11:0,11,78	0/1:11,0:11:49.50:49,0,93	0/1:8,3:11:99:186,0,106	1/1:13,1:10:9.91:182,10,0	0/1:12,3:14:49.62:50,0,69	0/0:17,1:14:3.01:0,3,40	0/0:18,0:18:26.76:0,27,298	0/0:18,0:17:3.51:0,4,78	0/0:15,0:14:2.92:0,3,31	0/0:25,0:25:34.63:0,35,319	0/0:15,0:13:20.45:0,20,363	0/0:12,0:10:29.56:0,30,278	0/0:12,0:11:20.28:0,20,145
chr10	30493713	.	G	GTGTA	2730.15	PASS	AB=0.962;AC=29;AF=0.537;AN=54;BaseQRankSum=2.538;DP=446;FS=7.944;HRun=0;HaplotypeScore=231.0171;InbreedingCoeff=-0.2363;MQ=30.82;MQ0=15;MQRankSum=-1.233;QD=7.38;ReadPosRankSum=7.408;VQSLOD=0.9070;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:23:38.19:80,0,38	1/1:8,0:8:11.85:136,12,0	./.	0/0:5,0:1:2.92:0,3,17	0/1:16,2:17:13.24:84,0,13	0/1:15,0:12:17.93:95,0,18	0/1:15,2:12:8.93:120,0,9	0/0:26,0:18:33.10:0,33,238	1/1:21,0:20:0.83:180,1,0	0/1:20,1:19:45.13:247,0,45	0/1:17,0:17:29.20:101,0,29	1/1:18,0:17:1.52:120,2,0	0/1:14,0:15:18.79:151,0,19	0/1:11,2:12:3.96:239,0,4	1/1:27,0:23:14.98:205,15,0	1/1:11,1:12:11:162,11,0	0/1:11,0:11:1.31:1,0,60	0/0:11,0:11:0.88:0,1,66	0/0:14,0:10:14.77:0,15,126	0/1:14,0:14:7.96:89,0,8	0/0:19,0:15:0.36:0,0,1	0/1:16,1:17:30.72:118,0,31	0/1:19,0:18:18.44:68,0,18	1/1:15,0:14:2.45:22,2,0	0/1:23,2:25:56.24:264,0,56	0/1:15,0:13:48.91:113,0,49	1/1:14,0:12:12.52:235,13,0	0/1:12,0:11:52.08:52,0,82
chr10	30493753	.	CA	C	4797.62	PASS	AB=0.971;AC=54;AF=0.964;AN=56;BaseQRankSum=4.520;DP=441;FS=2.248;HRun=1;HaplotypeScore=143.0895;InbreedingCoeff=-0.0437;MQ=61.43;MQ0=2;MQRankSum=-2.709;QD=10.88;ReadPosRankSum=6.271;VQSLOD=3.1523;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:26:24.78:309,25,0	1/1:9,0:9:25.60:136,26,0	1/1:13,0:8:11.19:68,11,0	0/1:15,1:13:21.83:41,0,22	1/1:18,0:18:14.78:168,15,0	1/1:13,0:13:31.70:181,32,0	0/1:19,0:17:3.75:75,0,4	1/1:20,0:20:47.42:203,47,0	1/1:14,0:14:23.26:140,23,0	1/1:13,0:12:28.90:126,29,0	1/1:10,1:11:20.15:133,20,0	1/1:18,0:17:15.26:181,15,0	1/1:14,0:14:17.67:196,18,0	1/1:13,0:13:7.81:141,8,0	1/1:23,1:22:51.32:280,51,0	1/1:19,0:19:40.02:218,40,0	1/1:11,0:11:23.09:128,23,0	1/1:7,0:7:17.08:89,17,0	1/1:16,0:16:33.45:192,33,0	1/1:12,0:12:12.67:141,13,0	1/1:24,1:25:51.75:292,52,0	1/1:17,0:17:37.18:212,37,0	1/1:20,0:20:4.64:204,5,0	1/1:17,0:16:31.89:186,32,0	1/1:19,0:19:28.61:264,29,0	1/1:10,0:10:26.64:119,27,0	1/1:16,0:16:37.61:238,38,0	1/1:9,0:9:25.74:138,26,0
chr10	30494514	.	G	GA	11011.74	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-11.608;DP=653;FS=0.000;HRun=9;HaplotypeScore=68.5024;InbreedingCoeff=0.9933;MQ=80.72;MQ0=1;MQRankSum=-3.167;QD=23.89;ReadPosRankSum=4.473;VQSLOD=5.3635;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,61:69:99:1680,133,0	1/1:4,9:13:30.08:330,30,0	0/0:23,0:24:44.07:0,44,449	0/0:23,0:22:23.33:0,23,282	1/1:9,23:32:40.60:668,41,0	1/1:5,18:23:51.14:564,51,0	1/1:2,24:26:54.15:596,54,0	0/0:26,0:26:62.95:0,63,544	1/1:3,16:19:36.40:457,36,0	1/1:4,24:28:69.19:763,69,0	1/1:2,17:19:48.04:501,48,0	1/1:2,14:16:16.06:405,16,0	1/1:4,16:20:48.13:527,48,0	1/1:2,16:18:45.05:484,45,0	1/1:3,20:24:50.97:545,51,0	1/1:5,13:18:16.05:395,16,0	0/0:31,0:31:47.94:0,48,643	0/0:27,0:27:73.80:0,74,630	0/0:15,0:15:38.98:0,39,337	0/0:27,0:27:65.98:0,66,573	0/0:17,0:17:41.98:0,42,365	1/1:3,14:17:21.91:453,22,0	1/1:2,18:20:45.12:496,45,0	1/1:6,15:22:43.78:477,44,0	1/1:3,12:15:30.08:332,30,0	1/1:5,13:19:38.94:412,39,0	1/1:5,26:32:19.92:659,20,0	1/1:0,11:11:24.06:265,24,0
chr10	30499393	.	ATT	A	11580.70	PASS	AB=0.900;AC=41;AF=0.732;AN=56;BaseQRankSum=-10.999;DP=583;FS=3.376;HRun=10;HaplotypeScore=89.5897;InbreedingCoeff=0.9149;MQ=82.45;MQ0=3;MQRankSum=-2.442;QD=26.99;ReadPosRankSum=7.096;VQSLOD=4.8406;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,21:23:57.14:635,57,0	1/1:0,12:12:27.07:301,27,0	0/0:24,0:24:45.12:0,45,660	0/1:8,0:9:10.85:11,0,148	1/1:2,14:15:33.07:368,33,0	1/1:2,22:24:60.16:669,60,0	1/1:0,18:18:54.15:602,54,0	0/0:5,0:26:72.01:0,72,688	1/1:4,15:19:42.11:468,42,0	1/1:2,23:25:69.18:769,69,0	1/1:1,23:24:69.18:769,69,0	1/1:0,23:23:63.17:702,63,0	1/1:4,21:25:32.38:608,32,0	1/1:3,23:26:60.15:669,60,0	1/1:2,13:15:30.07:334,30,0	1/1:4,20:24:54.13:602,54,0	0/0:3,0:22:37.62:0,38,374	0/0:3,0:17:45.03:0,45,420	0/0:9,0:27:69.10:0,69,712	0/0:3,0:24:69.05:0,69,668	0/0:4,0:14:21.02:0,21,195	1/1:3,21:23:51.12:568,51,0	1/1:2,23:25:63.17:702,63,0	1/1:3,14:17:39.09:435,39,0	1/1:0,10:10:30.08:334,30,0	1/1:2,26:27:75.13:796,75,0	1/1:4,27:31:78.20:869,78,0	1/1:0,11:11:33.09:368,33,0
chr10	30501009	.	CA	C	13980.48	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-3.084;DP=561;FS=6.635;HRun=7;HaplotypeScore=60.5326;InbreedingCoeff=0.8424;MQ=72.18;MQ0=1;MQRankSum=-3.250;QD=26.73;ReadPosRankSum=4.472;VQSLOD=5.4903;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,22:23:63.14:643,63,0	1/1:0,11:11:33.08:337,33,0	0/0:18,0:15:0.01:0,0,188	0/0:20,0:17:27.07:0,27,303	1/1:1,26:27:78.18:796,78,0	1/1:1,11:12:33.07:337,33,0	1/1:0,11:11:30.07:306,30,0	1/1:3,24:27:71.77:687,72,0	1/1:0,18:18:54.12:551,54,0	1/1:1,19:20:57.12:581,57,0	1/1:1,21:22:54.08:540,54,0	1/1:0,17:17:48.11:490,48,0	1/1:0,14:14:42.10:428,42,0	1/1:1,25:26:65.94:673,66,0	1/1:0,19:19:54.12:551,54,0	1/1:3,15:18:38.96:398,39,0	1/1:4,25:29:72.16:734,72,0	1/1:0,14:14:42.10:428,42,0	1/1:0,22:22:63.10:624,63,0	1/1:1,31:32:87.07:854,87,0	1/1:3,5:8:18.03:177,18,0	1/1:1,20:21:57.13:582,57,0	1/1:2,19:21:54.12:549,54,0	1/1:0,14:14:33.08:337,33,0	1/1:1,26:27:66.15:673,66,0	1/1:3,15:18:45.08:452,45,0	1/1:5,34:39:84.19:857,84,0	1/1:0,13:13:39.09:398,39,0
chr10	30501093	.	C	CTT	3894.28	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-4.538;DP=654;FS=15.099;HRun=9;HaplotypeScore=87.4269;InbreedingCoeff=0.9601;MQ=67.79;MQ0=6;MQRankSum=-1.308;QD=31.66;ReadPosRankSum=-3.109;VQSLOD=1.8795;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:60.12:0,60,629	0/0:11,0:11:33.08:0,33,350	0/0:39,0:25:30.60:0,31,426	0/0:34,0:18:28.85:0,29,271	0/0:35,0:35:90.14:0,90,932	0/0:21,0:21:60.13:0,60,630	0/0:11,0:12:35.81:0,36,355	1/1:5,13:17:39.10:565,39,0	0/0:17,0:17:45.09:0,45,479	0/0:35,0:35:93.18:0,93,976	0/0:24,0:25:68.86:0,69,702	0/0:18,0:18:45.09:0,45,471	0/0:18,0:18:45.08:0,45,471	0/0:28,0:28:72.14:0,72,757	0/0:23,0:23:69.15:0,69,725	0/0:18,0:18:41.93:0,42,447	1/1:10,8:18:15.19:541,15,0	1/1:6,16:22:60.09:845,60,0	1/1:12,8:23:28.23:730,28,0	1/1:12,14:28:69.17:938,69,0	1/1:2,11:13:18.06:277,18,0	0/0:27,0:28:60.05:0,60,686	0/0:25,0:25:66.12:0,66,694	0/0:17,0:17:45.09:0,45,470	0/0:36,0:36:87.14:0,87,909	0/0:26,0:26:69.15:0,69,734	0/0:39,0:39:93.15:0,93,971	0/0:3,0:3:3:0,3,32
chr10	30502811	.	AGT	A	10202.78	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-4.503;DP=686;FS=11.461;HRun=0;HaplotypeScore=103.6202;InbreedingCoeff=0.8542;MQ=69.76;MQ0=23;MQRankSum=0.566;QD=20.20;ReadPosRankSum=5.336;VQSLOD=4.7254;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:16,9:24:42.11:509,42,0	1/1:6,1:7:12.04:149,12,0	0/0:84,0:28:40.20:0,40,647	0/0:97,0:37:61.37:0,61,739	1/1:5,7:12:21.05:249,21,0	1/1:9,8:17:42.11:510,42,0	1/1:5,15:20:30.09:375,30,0	1/1:8,10:17:30.06:356,30,0	1/1:10,7:17:33.10:410,33,0	1/1:8,19:27:54.16:673,54,0	1/1:8,2:10:27.09:337,27,0	1/1:4,22:26:30.09:369,30,0	1/1:4,20:24:40.69:490,41,0	1/1:6,27:33:27.07:325,27,0	1/1:2,23:26:9.03:113,9,0	1/1:11,5:16:33.11:412,33,0	1/1:4,20:24:30.69:438,31,0	1/1:3,9:12:12.04:150,12,0	1/1:5,18:23:53.92:642,54,0	1/1:2,16:18:15.05:188,15,0	1/1:7,27:34:33.10:413,33,0	1/1:14,8:22:48.15:598,48,0	1/1:6,6:13:35.95:427,36,0	1/1:17,13:28:54.12:667,54,0	1/1:10,2:12:21.04:263,21,0	1/1:14,3:17:44.46:515,44,0	1/1:13,5:18:48.14:587,48,0	1/1:3,1:3:3.01:38,3,0
chr10	30502831	.	C	CGTGT	5773.75	PASS	AB=0.922;AC=44;AF=0.880;AN=50;BaseQRankSum=-3.163;DP=814;FS=2.606;HRun=0;HaplotypeScore=178.6105;InbreedingCoeff=0.0637;MQ=52.10;MQ0=30;MQRankSum=-0.415;QD=9.01;ReadPosRankSum=-2.513;VQSLOD=4.1835;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:33,5:35:27.09:525,27,0	1/1:5,3:8:12.04:251,12,0	./.	./.	1/1:15,7:23:29.62:539,30,0	1/1:22,3:25:0.27:140,0,0	0/1:24,1:25:8.45:72,0,8	1/1:25,0:23:12.04:196,12,0	1/1:13,7:23:17.51:257,18,0	1/1:28,0:28:8.76:69,9,0	0/0:11,2:13:3.01:0,3,37	0/1:25,3:28:29:234,0,29	0/1:31,1:33:4.93:229,0,5	1/1:37,1:38:14.78:220,15,0	1/1:32,2:34:11.65:165,12,0	1/1:23,2:25:20.11:252,20,0	1/1:28,1:29:16.87:302,17,0	./.	1/1:32,0:33:15.03:237,15,0	1/1:19,0:20:2.98:25,3,0	1/1:33,1:33:3.01:71,3,0	1/1:31,5:34:30.09:608,30,0	1/1:17,5:22:8.34:152,8,0	0/1:32,4:33:3.34:193,0,3	1/1:16,1:17:15.05:314,15,0	1/1:26,2:28:26.21:310,26,0	1/1:18,3:21:19.90:285,20,0	1/1:4,4:8:6.02:128,6,0
chr10	30504071	.	GTA	G	3789.34	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=8.414;DP=728;FS=0.778;HRun=0;HaplotypeScore=140.1337;InbreedingCoeff=0.9051;MQ=50.23;MQ0=22;MQRankSum=-0.502;QD=8.29;ReadPosRankSum=0.041;VQSLOD=3.1866;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:24:17.09:144,17,0	1/1:9,0:9:9.42:85,9,0	0/0:34,0:21:43.41:0,43,661	0/0:39,0:29:53.55:0,54,684	1/1:33,0:31:48.17:385,48,0	1/1:27,0:26:20.92:167,21,0	1/1:26,1:24:14.49:113,14,0	0/0:36,0:33:92.80:0,93,1291	1/1:33,0:32:9.80:144,10,0	1/1:39,2:35:36.63:622,37,0	1/1:15,0:15:3:25,3,0	1/1:18,4:22:17.63:157,18,0	1/1:16,0:15:17.69:119,18,0	1/1:24,0:22:20.51:154,21,0	1/1:30,0:29:23.64:187,24,0	1/1:22,0:22:20.88:182,21,0	0/0:25,0:25:47.17:0,47,738	0/0:20,0:20:7.31:0,7,571	0/0:29,0:28:46.19:0,46,823	0/0:17,0:17:16.77:0,17,363	0/0:71,0:68:87.06:0,87,2058	1/1:19,0:18:18.43:145,18,0	1/1:15,0:14:14.95:122,15,0	1/1:28,0:28:43.35:327,43,0	1/1:21,0:20:17.95:151,18,0	1/1:29,1:28:26.69:335,27,0	1/1:14,1:13:16.12:184,16,0	1/1:4,1:4:5.94:42,6,0
chr10	30504192	.	CATGGAGACCAGGAGAGG	C	30526.70	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=17.573;DP=660;FS=31.042;HRun=0;HaplotypeScore=336.2990;InbreedingCoeff=0.9787;MQ=87.24;MQ0=0;MQRankSum=-16.273;QD=74.27;ReadPosRankSum=7.258;VQSLOD=3.1205;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,25:28:30.10:1410,30,0	1/1:2,8:10:24.08:1191,24,0	0/0:29,0:29:77.83:0,78,4131	0/0:32,0:32:84.29:0,84,4559	1/1:5,15:20:18.06:893,18,0	1/1:4,10:14:30.10:1447,30,0	1/1:8,10:18:15.05:705,15,0	0/0:39,0:39:99:0,108,8107	1/1:5,20:25:48.16:2280,48,0	1/1:4,22:26:59.68:2571,60,0	1/1:3,17:20:24.08:1079,24,0	1/1:4,10:14:24.08:1152,24,0	1/1:1,17:18:30.10:1489,30,0	1/1:5,25:30:57.20:2615,57,0	1/1:7,23:30:45.15:2189,45,0	1/1:2,24:26:51.18:2332,51,0	0/0:30,0:30:78.27:0,78,6345	0/0:18,0:18:51.18:0,51,3855	0/0:20,0:20:55.43:0,55,3844	0/0:16,0:16:48.16:0,48,3369	0/0:65,0:65:99:0,169,13022	1/1:6,22:28:42.14:1858,42,0	1/1:1,10:11:18.06:894,18,0	1/1:8,16:24:12.17:595,12,0	1/1:7,15:22:30.10:1345,30,0	1/1:2,18:20:49.05:2136,49,0	1/1:4,19:23:39.05:1925,39,0	1/1:1,3:4:9.03:422,9,0
chr10	30504594	.	A	AT	3681.25	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-13.996;DP=560;FS=3.505;HRun=8;HaplotypeScore=51.6332;InbreedingCoeff=0.9908;MQ=71.81;MQ0=0;MQRankSum=0.995;QD=27.07;ReadPosRankSum=-1.222;VQSLOD=3.9291;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:23:63.03:0,63,577	0/0:6,0:6:18.01:0,18,165	0/0:23,0:23:45.26:0,45,434	0/0:4,0:4:11.99:0,12,104	0/0:31,0:31:75.03:0,75,686	0/0:23,0:23:69.04:0,69,632	0/0:20,0:20:51.02:0,51,467	1/1:3,20:23:57.12:633,57,0	0/0:13,0:13:33.01:0,33,302	0/0:19,0:19:57.02:0,57,517	0/0:35,0:35:90.03:0,90,824	0/0:30,0:30:87.02:0,87,791	0/0:19,0:19:54.03:0,54,494	0/0:12,0:12:33.01:0,33,302	0/0:25,0:25:66.04:0,66,604	0/0:10,0:10:27.01:0,27,247	1/1:4,20:24:54.16:623,54,0	1/1:5,20:25:54.16:623,54,0	1/1:6,18:24:57.15:645,57,0	1/1:5,24:30:72.05:811,72,0	1/1:0,10:10:30.09:346,30,0	0/0:8,0:8:20.99:0,21,187	0/0:19,0:19:45.02:0,45,412	0/0:13,0:13:39.02:0,39,357	0/0:26,0:26:69.02:0,69,627	0/0:29,0:29:81.04:0,81,741	0/0:23,0:23:57.02:0,57,522	0/0:13,0:13:38.98:0,39,344
chr10	30507526	.	TA	T	4362.91	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=9.093;DP=333;FS=6.608;HRun=10;HaplotypeScore=36.9680;InbreedingCoeff=0.8644;MQ=72.89;MQ0=1;MQRankSum=0.233;QD=20.01;ReadPosRankSum=5.643;VQSLOD=4.8498;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,14:15:38.99:338,39,0	1/1:1,4:5:8.99:78,9,0	0/0:13,0:8:21.01:0,21,202	0/0:12,0:6:6.01:0,6,63	1/1:1,8:9:20.98:182,21,0	1/1:2,11:13:32.99:286,33,0	1/1:2,8:10:14.99:130,15,0	0/0:24,0:24:72.18:0,72,782	1/1:1,7:8:18:156,18,0	1/1:1,14:15:41.97:361,42,0	1/1:0,16:16:38.94:331,39,0	1/1:3,9:12:23.99:208,24,0	1/1:0,7:7:15:130,15,0	1/1:1,3:4:6:52,6,0	1/1:1,8:9:18:156,18,0	1/1:0,11:11:26.99:234,27,0	0/0:15,0:15:42.10:0,42,455	0/0:20,0:20:48.13:0,48,530	0/0:9,0:9:12.03:0,12,133	0/0:10,1:11:1.02:0,1,239	0/0:11,0:11:30.08:0,30,332	1/1:0,1:1:3:26,3,0	1/1:1,11:12:23.99:209,24,0	1/1:1,7:8:15:130,15,0	1/1:2,19:21:47.99:417,48,0	1/1:0,14:14:41.99:365,42,0	1/1:0,21:21:53.88:469,54,0	1/1:3,4:7:11.99:104,12,0
chr10	30520802	.	T	TA	10820.59	PASS	AB=0.710;AC=39;AF=0.696;AN=56;BaseQRankSum=-13.114;DP=638;FS=14.825;HRun=10;HaplotypeScore=61.4531;InbreedingCoeff=0.7416;MQ=73.91;MQ0=0;MQRankSum=-0.465;QD=23.02;ReadPosRankSum=2.441;VQSLOD=4.4786;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,13:20:26.56:460,27,0	0/1:2,8:10:0.58:200,0,1	0/0:17,0:17:32.74:0,33,258	0/1:9,0:9:15.68:16,0,69	1/1:6,29:35:31.73:698,32,0	1/1:2,30:32:84.19:887,84,0	1/1:5,13:18:23.06:432,23,0	0/0:28,1:29:13.76:0,14,393	1/1:8,15:23:20.47:422,20,0	1/1:3,21:24:65.99:679,66,0	1/1:4,35:39:90.15:935,90,0	1/1:3,19:22:48.12:512,48,0	1/1:1,16:17:20.47:423,20,0	1/1:4,21:25:26.48:486,26,0	1/1:4,25:30:7.14:677,7,0	1/1:1,15:16:39.10:416,39,0	0/0:31,1:33:59.30:0,59,601	0/0:21,0:21:47.88:0,48,389	0/0:20,0:20:53.72:0,54,433	0/0:37,0:37:99:0,102,837	0/0:11,0:11:23.95:0,24,197	1/1:4,14:18:14.42:347,14,0	1/1:6,17:24:23.45:444,23,0	1/1:0,16:16:48.12:512,48,0	1/1:4,25:29:4.27:662,4,0	1/1:1,31:32:93.19:973,93,0	0/1:6,14:21:35.35:417,0,35	1/1:0,7:7:21.05:224,21,0
chr10	30526248	.	AC	A	5891.59	PASS	AB=0.729;AC=39;AF=0.696;AN=56;BaseQRankSum=-2.517;DP=451;FS=6.194;HRun=10;HaplotypeScore=54.8449;InbreedingCoeff=0.7009;MQ=80.27;MQ0=0;MQRankSum=-1.451;QD=16.19;ReadPosRankSum=5.364;VQSLOD=5.1061;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:9,15:24:3.55:361,0,4	1/1:5,7:12:12.46:105,12,0	0/0:22,0:19:26.21:0,26,216	0/1:19,0:15:24.12:24,0,114	1/1:3,14:17:11.74:322,12,0	1/1:5,17:22:41.98:364,42,0	1/1:2,10:12:26.99:234,27,0	0/0:5,0:5:0:0,0,0	1/1:4,16:20:38.98:338,39,0	1/1:8,9:17:32.99:286,33,0	1/1:5,14:19:41.97:360,42,0	1/1:3,8:12:19.94:148,20,0	1/1:3,12:15:35.92:304,36,0	0/1:3,9:12:2.73:127,0,3	1/1:4,14:18:44.99:390,45,0	1/1:3,11:15:38.03:318,38,0	0/0:23,0:23:12.31:0,12,540	0/0:20,0:20:39.06:0,39,410	0/0:7,0:8:14.96:0,15,125	0/0:2,0:3:6.75:0,7,39	0/0:5,0:5:5.84:0,6,39	1/1:10,12:22:43.18:359,43,0	1/1:3,14:18:34.97:285,35,0	1/1:3,10:13:20.99:182,21,0	1/1:3,17:20:38.99:339,39,0	1/1:7,10:17:38.97:334,39,0	1/1:4,20:24:41.01:345,41,0	1/1:2,14:16:41.99:364,42,0
chr10	30527014	.	T	TTC	12085.99	PASS	AB=0.575;AC=38;AF=0.679;AN=56;BaseQRankSum=-11.948;DP=641;FS=2.756;HRun=0;HaplotypeScore=75.1454;InbreedingCoeff=0.7635;MQ=69.52;MQ0=5;MQRankSum=0.967;QD=27.04;ReadPosRankSum=3.387;VQSLOD=5.5231;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,23:26:51.17:827,51,0	1/1:6,5:11:12.04:197,12,0	0/0:29,0:22:34.60:0,35,380	0/0:26,0:15:19.96:0,20,232	1/1:6,18:24:54.17:811,54,0	1/1:5,18:23:1.93:553,2,0	1/1:6,16:22:27.09:436,27,0	0/0:34,0:34:60.17:0,60,723	0/1:6,12:18:1.07:505,0,1	1/1:5,24:29:72.22:1123,72,0	1/1:4,20:25:42.14:670,42,0	1/1:2,16:18:36.12:589,36,0	1/1:1,18:19:4.94:602,5,0	1/1:2,21:22:39.13:640,39,0	1/1:5,15:21:1.33:597,1,0	1/1:7,18:26:18.06:295,18,0	0/0:21,0:21:53.66:0,54,640	0/0:27,0:27:69.22:0,69,855	0/0:16,0:17:44.96:0,45,524	0/0:19,0:20:54:0,54,646	0/0:20,0:20:51.09:0,51,578	1/1:7,20:28:39.11:626,39,0	1/1:5,17:22:7.95:651,8,0	1/1:5,19:24:10.97:701,11,0	1/1:5,16:21:20.63:480,21,0	1/1:7,14:21:42.14:684,42,0	1/1:8,23:31:14.05:750,14,0	0/1:2,8:11:44.27:349,0,44
chr10	30527488	.	CAT	C	2272.53	PASS	AB=0.991;AC=24;AF=0.429;AN=56;BaseQRankSum=0.070;DP=887;FS=6.174;HRun=0;HaplotypeScore=193.7804;InbreedingCoeff=-0.1071;MQ=52.66;MQ0=10;MQRankSum=6.136;QD=3.95;ReadPosRankSum=-5.793;VQSLOD=-0.2117;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:34,0:34:9.59:157,10,0	0/1:14,1:15:21.15:30,0,21	0/0:40,0:18:24.16:0,24,426	0/0:47,0:23:29.42:0,29,494	0/1:30,0:27:12.80:52,0,13	0/1:28,0:28:5.03:92,0,5	1/1:34,0:34:11.58:180,12,0	0/0:26,0:25:54.95:0,55,832	0/1:18,0:18:11.07:57,0,11	0/1:30,0:30:9:216,0,9	0/1:19,1:20:8.75:76,0,9	0/1:41,0:41:19.13:124,0,19	0/1:28,0:28:48.79:92,0,49	0/1:36,0:36:50.37:105,0,50	1/1:1,30:31:41.60:498,42,0	0/1:44,0:44:57.83:79,0,58	0/0:34,0:34:78.89:0,79,1357	0/0:19,0:19:37.14:0,37,821	0/0:21,0:21:33.51:0,34,605	0/0:40,0:40:99:0,108,1944	0/0:85,0:85:99:0,184,3518	0/1:30,0:30:19.04:99,0,19	0/1:20,0:20:7.88:25,0,8	1/1:35,0:35:1.65:119,2,0	0/1:33,0:33:2.26:74,0,2	0/1:34,1:35:9.11:257,0,9	0/1:22,0:22:14.33:74,0,14	0/1:11,0:11:23.04:40,0,23
chr10	30527490	.	TAC	T	171.28	PASS	AB=0.952;AC=6;AF=0.107;AN=56;BaseQRankSum=0.497;DP=893;FS=0.670;HRun=0;HaplotypeScore=203.2192;InbreedingCoeff=0.2457;MQ=52.23;MQ0=11;MQRankSum=0.481;QD=1.45;ReadPosRankSum=-0.885;VQSLOD=2.2752;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:2.41:0,2,49	0/0:14,0:14:4.25:0,4,132	0/0:39,0:16:12.04:0,12,190	0/0:45,0:20:30.04:0,30,399	0/0:31,0:28:19.16:0,19,101	0/0:29,0:29:19.69:0,20,138	0/0:33,0:33:16.86:0,17,127	0/1:24,2:25:36.11:36,0,422	0/1:20,0:20:1.28:1,0,83	0/0:29,0:29:37.96:0,38,345	0/1:19,0:19:2.58:3,0,52	0/0:40,0:40:45.10:0,45,332	0/0:29,0:29:30.16:0,30,340	0/0:37,0:37:31.44:0,31,293	1/1:31,0:31:35.52:196,36,0	0/0:45,0:45:45.93:0,46,351	0/0:32,0:33:55.68:0,56,1139	0/0:20,0:20:48.07:0,48,696	0/1:19,3:22:51.61:52,0,449	0/0:39,0:40:58.28:0,58,1538	0/0:89,1:90:99:0,148,2898	0/0:30,0:30:23.45:0,23,148	0/0:20,0:20:10.10:0,10,61	0/0:36,0:36:21.93:0,22,162	0/0:33,0:33:24.13:0,24,226	0/0:34,0:34:31.98:0,32,406	0/0:22,0:22:24.75:0,25,180	0/0:11,0:11:14.87:0,15,142
chr10	30527501	.	A	ACACT	11352.25	PASS	AB=0.544;AC=37;AF=0.661;AN=56;BaseQRankSum=14.105;DP=951;FS=4.545;HRun=0;HaplotypeScore=199.0378;InbreedingCoeff=0.8927;MQ=53.23;MQ0=12;MQRankSum=-8.667;QD=19.34;ReadPosRankSum=4.857;VQSLOD=4.5265;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,25:33:9.03:201,9,0	1/1:3,12:15:20.73:452,21,0	0/0:42,0:16:26.18:0,26,349	0/0:53,0:23:57.44:0,57,762	1/1:9,25:35:8.96:152,9,0	1/1:4,23:30:21.58:402,22,0	1/1:4,26:33:18.77:267,19,0	0/0:27,0:26:75.14:0,75,956	1/1:4,24:30:23.83:442,24,0	1/1:0,29:32:85.01:1343,85,0	1/1:2,16:22:4.80:113,5,0	1/1:5,37:46:49:1087,49,0	1/1:9,19:31:32.74:921,33,0	1/1:3,28:38:39.33:873,39,0	0/0:34,0:34:60.98:0,61,733	1/1:3,40:45:49.55:1160,50,0	0/0:35,0:35:90.15:0,90,1499	0/0:20,0:20:56.57:0,57,882	0/0:23,0:23:62.93:0,63,801	0/0:41,0:41:99:0,123,2018	0/0:89,0:89:99:0,237,3768	0/1:5,25:31:3.12:384,0,3	1/1:0,21:24:8.65:178,9,0	1/1:8,22:36:24.94:534,25,0	1/1:4,8:37:35.81:645,36,0	1/1:4,28:36:62.08:1226,62,0	1/1:1,18:20:27.09:637,27,0	1/1:2,7:11:12.50:335,12,0
chr10	30527503	.	A	ACT	3946.78	PASS	AB=0.988;AC=26;AF=0.464;AN=56;BaseQRankSum=15.572;DP=950;FS=2.497;HRun=0;HaplotypeScore=204.3768;InbreedingCoeff=0.1430;MQ=53.06;MQ0=12;MQRankSum=-9.407;QD=6.77;ReadPosRankSum=7.037;VQSLOD=3.1239;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:32,0:32:6.83:55,7,0	0/1:14,1:15:9.87:192,0,10	0/0:41,0:16:42.05:0,42,460	0/0:52,0:22:57.08:0,57,691	0/1:35,1:35:11.62:52,0,12	0/1:30,0:30:6.52:133,0,7	1/1:32,1:33:16.71:158,17,0	0/0:28,0:27:75.07:0,75,837	0/1:31,0:31:28.77:159,0,29	0/1:31,0:31:99:320,0,158	0/1:24,0:24:25.69:30,0,26	1/1:45,2:47:29.09:429,29,0	0/1:30,1:31:91.33:336,0,91	1/1:38,0:38:38.14:332,38,0	0/0:35,0:35:61.30:0,61,599	1/1:41,1:42:48.55:452,49,0	0/0:36,0:36:93.61:0,94,1261	0/0:20,0:20:56.57:0,57,752	0/0:23,0:23:62.95:0,63,705	0/0:41,0:41:99:0,123,1691	0/0:91,0:91:99:0,243,3207	0/1:30,0:30:34.29:134,0,34	1/1:24,0:24:9.41:90,9,0	0/1:35,0:35:18.90:181,0,19	0/1:37,0:37:30.77:184,0,31	0/1:36,0:36:99:320,0,184	1/1:19,0:19:26.39:266,26,0	0/1:11,0:11:41.15:125,0,41
chr10	30527509	.	ACT	A	2443.66	PASS	AB=1.000;AC=25;AF=0.446;AN=56;BaseQRankSum=0.342;DP=948;FS=2.538;HRun=0;HaplotypeScore=206.1115;InbreedingCoeff=-0.0497;MQ=55.05;MQ0=12;MQRankSum=3.570;QD=3.96;ReadPosRankSum=-2.643;VQSLOD=2.4538;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:33,0:33:3.18:107,3,0	0/1:18,0:18:13.56:94,0,14	0/0:43,0:18:50.06:0,50,520	0/0:49,0:20:48.54:0,49,688	0/1:38,0:36:24.96:91,0,25	0/1:28,0:28:9.49:61,0,9	0/1:33,0:33:0.51:83,0,1	0/0:25,0:24:56.33:0,56,830	1/1:33,1:34:12.83:251,13,0	1/1:34,0:34:14.16:309,14,0	0/1:24,0:24:12.75:94,0,13	0/1:43,0:43:27.64:33,0,28	0/1:32,0:32:27.23:137,0,27	0/1:36,0:36:32.44:89,0,32	1/1:33,4:38:66.45:718,66,0	0/1:40,0:40:29.45:29,0,52	0/0:33,2:35:41.67:0,42,1376	0/0:21,0:21:54.04:0,54,848	0/0:22,0:22:41.93:0,42,782	0/0:42,0:42:99:0,115,1876	0/0:94,0:94:99:0,200,3783	0/1:27,0:27:12.83:13,0,40	0/1:23,0:23:8.07:21,0,8	0/1:32,0:32:4.33:67,0,4	1/1:37,0:37:1.28:97,1,0	0/1:35,0:35:10.07:236,0,10	0/1:20,0:20:13.07:57,0,13	0/1:12,0:12:21.99:31,0,22
chr10	30532050	.	T	TA	16880.44	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-8.878;DP=599;FS=12.996;HRun=1;HaplotypeScore=64.9467;InbreedingCoeff=0.9927;MQ=73.41;MQ0=0;MQRankSum=-0.675;QD=36.54;ReadPosRankSum=6.620;VQSLOD=3.5992;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,20:22:60.14:833,60,0	1/1:1,13:14:39.12:554,39,0	0/0:15,0:15:36.09:0,36,450	0/0:7,0:7:18.05:0,18,236	1/1:1,26:28:78.08:1046,78,0	1/1:1,24:25:72.23:1034,72,0	1/1:5,7:12:33.08:445,33,0	0/0:27,0:27:75.24:0,75,1007	1/1:1,28:29:75.24:1081,75,0	1/1:1,32:33:99:1371,99,0	1/1:3,25:28:78.16:1076,78,0	1/1:0,18:18:48.16:699,48,0	1/1:3,24:27:59.20:804,59,0	1/1:1,25:26:63.11:894,63,0	1/1:0,21:21:51.17:743,51,0	1/1:1,20:21:57.19:833,57,0	0/0:15,0:15:45.14:0,45,603	0/0:16,0:16:44.82:0,45,489	0/0:22,0:22:56.52:0,57,714	0/0:31,0:31:90.23:0,90,1145	0/0:4,0:4:12.04:0,12,167	1/1:6,21:27:78.18:1042,78,0	1/1:1,26:27:57.18:834,57,0	1/1:3,6:9:21.04:269,21,0	1/1:0,18:18:42.13:615,42,0	1/1:1,31:32:93.24:1281,93,0	1/1:2,27:29:71.52:1047,72,0	1/1:6,10:16:32.99:379,33,0
chr10	30532124	.	T	TA	14265.89	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-8.282;DP=645;FS=6.949;HRun=6;HaplotypeScore=73.2542;InbreedingCoeff=0.9994;MQ=85.05;MQ0=0;MQRankSum=-0.345;QD=32.95;ReadPosRankSum=2.517;VQSLOD=4.9839;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,25:30:72.23:904,72,0	1/1:2,13:15:42.12:512,42,0	0/0:23,0:24:22.37:0,22,401	0/0:27,0:26:33.14:0,33,313	1/1:8,26:34:78.24:968,78,0	1/1:5,20:25:69.20:842,69,0	1/1:1,12:13:30.10:377,30,0	0/0:26,0:26:75.17:0,75,765	1/1:2,13:15:42.13:528,42,0	1/1:5,26:31:84.26:1044,84,0	1/1:4,28:32:81.26:1008,81,0	1/1:1,17:18:54.17:679,54,0	1/1:5,17:23:66.18:792,66,0	1/1:7,18:25:63.18:768,63,0	0/0:25,0:24:63.10:0,63,622	1/1:3,15:18:51.15:629,51,0	0/0:16,0:16:39.08:0,39,398	0/0:20,0:20:48.11:0,48,489	0/0:12,0:12:36.08:0,36,367	0/0:42,0:42:99:0,117,1180	0/0:20,0:20:57.09:0,57,571	1/1:2,21:23:63.18:768,63,0	1/1:7,21:28:75.23:926,75,0	1/1:1,15:16:45.14:561,45,0	1/1:5,15:20:54.16:661,54,0	1/1:6,23:29:75.24:943,75,0	1/1:3,18:21:60.19:753,60,0	1/1:1,16:17:48.15:604,48,0
chr10	30535461	.	CA	C	9250.77	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=12.937;DP=563;FS=1.703;HRun=9;HaplotypeScore=85.5802;InbreedingCoeff=0.9925;MQ=69.80;MQ0=0;MQRankSum=1.144;QD=22.73;ReadPosRankSum=4.256;VQSLOD=5.4412;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,16:20:45.02:412,45,0	1/1:1,9:10:27.01:247,27,0	0/0:18,0:15:13.09:0,13,200	0/0:10,0:9:18.05:0,18,202	1/1:3,21:24:60.02:549,60,0	1/1:2,23:25:66.03:604,66,0	1/1:1,9:10:27.01:247,27,0	0/0:28,1:29:32.70:0,33,609	1/1:1,20:21:33.50:471,33,0	1/1:1,18:19:51.03:466,51,0	1/1:4,23:27:63.02:576,63,0	1/1:1,20:21:51.03:467,51,0	1/1:1,16:17:48.03:439,48,0	1/1:1,20:21:48.02:439,48,0	1/1:1,24:25:63.03:576,63,0	1/1:3,20:23:56.94:522,57,0	0/0:21,0:21:63.12:0,63,693	0/0:9,0:9:27.08:0,27,312	0/0:22,0:22:57.16:0,57,650	0/0:29,0:30:84.08:0,84,949	0/0:17,0:17:45.13:0,45,520	1/1:2,15:17:42.02:384,42,0	1/1:0,24:24:66.04:604,66,0	1/1:4,6:10:18:165,18,0	1/1:3,24:27:63.03:577,63,0	1/1:4,20:24:57:516,57,0	1/1:2,29:31:77.95:714,78,0	1/1:1,10:11:30.02:275,30,0
chr10	30536296	.	CT	C	11659.81	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=12.668;DP=593;FS=2.557;HRun=7;HaplotypeScore=69.9426;InbreedingCoeff=0.9964;MQ=66.50;MQ0=1;MQRankSum=-1.858;QD=26.87;ReadPosRankSum=3.867;VQSLOD=5.6512;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,29:32:78.17:790,78,0	1/1:0,6:6:18.04:184,18,0	0/0:7,0:7:18.05:0,18,215	0/0:13,0:11:27.04:0,27,284	1/1:0,22:22:57.12:580,57,0	1/1:0,7:7:21.05:214,21,0	1/1:1,24:25:63.14:643,63,0	0/0:28,0:28:75.23:0,75,932	1/1:2,22:24:63.14:643,63,0	1/1:2,26:28:75.15:756,75,0	1/1:0,23:23:69.16:704,69,0	1/1:0,27:27:78.18:796,78,0	1/1:0,20:20:57.13:581,57,0	1/1:3,20:23:54.12:551,54,0	1/1:1,25:26:66.15:673,66,0	1/1:0,21:21:57.13:582,57,0	0/0:29,0:29:75.24:0,75,943	0/0:17,0:17:51.16:0,51,639	0/0:21,0:21:54.16:0,54,665	0/0:18,0:18:54.15:0,54,652	0/0:26,0:26:72.23:0,72,905	1/1:2,18:20:48.10:489,48,0	1/1:2,15:17:42.09:429,42,0	1/1:1,27:28:72.16:735,72,0	1/1:1,20:21:56.75:581,57,0	1/1:1,20:21:54.09:543,54,0	1/1:4,26:30:78.17:790,78,0	1/1:0,13:13:39.09:398,39,0
chr10	30537370	.	AG	A	11993.49	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=12.330;DP=535;FS=6.869;HRun=3;HaplotypeScore=57.0966;InbreedingCoeff=0.9939;MQ=72.27;MQ0=0;MQRankSum=-2.733;QD=32.15;ReadPosRankSum=5.535;VQSLOD=4.6715;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,20:20:48.15:594,48,0	1/1:1,13:14:39.12:483,39,0	0/0:20,0:20:57.17:0,57,776	0/0:13,0:12:31.41:0,31,367	1/1:2,29:31:87.17:1043,87,0	1/1:0,17:17:36.11:446,36,0	1/1:0,17:17:45.14:558,45,0	0/0:34,0:34:90.22:0,90,1163	1/1:2,19:21:42.13:521,42,0	1/1:1,23:24:69.21:843,69,0	1/1:1,18:19:51.16:632,51,0	1/1:0,15:15:36.11:446,36,0	1/1:0,27:27:63.20:781,63,0	1/1:0,14:14:39.12:483,39,0	1/1:1,15:16:42.13:521,42,0	1/1:1,12:13:30.09:372,30,0	0/0:22,0:22:63.21:0,63,907	0/0:14,0:14:39.13:0,39,558	0/0:13,0:13:36.10:0,36,499	0/0:26,0:26:72.24:0,72,1035	0/0:20,0:20:60.19:0,60,846	1/1:1,5:6:12.04:149,12,0	1/1:0,21:21:60.15:726,60,0	1/1:0,9:9:21.07:260,21,0	1/1:0,18:18:51.16:632,51,0	1/1:1,22:23:66.18:794,66,0	1/1:1,25:26:75.24:930,75,0	1/1:1,21:22:63.20:780,63,0
chr10	30538916	.	A	AGGAGCC	12387.79	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-2.243;DP=513;FS=176.987;HRun=0;HaplotypeScore=88.9492;InbreedingCoeff=0.8918;MQ=52.23;MQ0=33;MQRankSum=-13.674;QD=48.77;ReadPosRankSum=0.375;VQSLOD=1.4414;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,8:14:23.95:656,24,0	1/1:0,3:4:6.02:212,6,0	0/0:51,0:23:51.15:0,51,1167	0/0:42,0:10:25.52:0,26,498	1/1:7,11:21:9.03:318,9,0	1/1:1,6:7:8.86:226,9,0	1/1:4,3:7:18.06:500,18,0	0/0:36,0:27:78.27:0,78,1744	1/1:3,5:7:11.87:332,12,0	1/1:7,14:19:54.17:1666,54,0	1/1:9,8:19:18.06:598,18,0	1/1:5,11:16:29.76:843,30,0	1/1:1,2:3:3.01:71,3,0	1/1:4,7:12:26.92:785,27,0	1/1:5,5:11:23.91:619,24,0	1/1:5,9:16:21.07:691,21,0	0/0:26,0:24:63.19:0,63,1440	0/0:14,0:14:36.08:0,36,765	0/0:35,0:29:77.50:0,77,1748	0/0:16,0:16:42.13:0,42,947	0/0:38,0:37:96.28:0,96,2165	1/1:6,9:17:21.07:704,21,0	1/1:3,12:16:18.06:638,18,0	1/1:3,0:3:3.01:38,3,0	1/1:5,8:13:27.09:921,27,0	1/1:6,10:18:45.12:1267,45,0	1/1:3,10:14:27.09:879,27,0	1/1:0,6:8:12.04:425,12,0
chr10	30553815	.	T	TA	1559.76	PASS	AB=0.772;AC=33;AF=0.660;AN=50;BaseQRankSum=0.666;DP=295;FS=2.334;HRun=14;HaplotypeScore=35.6457;InbreedingCoeff=0.3981;MQ=31.51;MQ0=74;MQRankSum=2.939;QD=7.32;ReadPosRankSum=0.957;VQSLOD=1.6729;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,2:4:3.89:28,4,0	1/1:1,4:7:14.84:119,15,0	./.	./.	1/1:6,8:11:23.49:198,23,0	1/1:15,6:20:0.62:116,1,0	0/1:3,2:4:13.27:20,0,13	0/0:15,0:12:20.62:0,21,134	0/1:10,3:9:10.27:32,0,10	1/1:10,7:13:21:185,21,0	1/1:10,6:12:11.84:93,12,0	0/1:6,1:5:17.48:17,0,29	1/1:3,5:8:11.99:104,12,0	1/1:5,0:4:3:26,3,0	1/1:2,1:9:17.67:98,18,0	1/1:3,4:7:17.95:148,18,0	0/0:20,0:6:8.76:0,9,55	0/0:11,0:7:8.81:0,9,58	0/0:7,0:8:11.32:0,11,64	0/0:7,0:7:13.83:0,14,81	0/0:8,0:3:6.64:0,7,34	1/1:1,2:2:3:26,3,0	1/1:4,8:11:6.81:189,7,0	./.	0/1:8,2:10:23.21:53,0,23	1/1:8,6:11:12.46:107,12,0	0/1:13,6:14:1.66:101,0,2	1/1:6,1:3:8.84:66,9,0
chr10	30553856	.	A	AAAG	370.58	PASS	AB=1.000;AC=12;AF=0.214;AN=56;BaseQRankSum=-4.145;DP=320;FS=4.151;HRun=0;HaplotypeScore=62.0902;InbreedingCoeff=-0.0980;MQ=60.29;MQ0=35;MQRankSum=-0.241;QD=2.79;ReadPosRankSum=-5.837;VQSLOD=-0.1126;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:12,0:9:12.74:13,0,69	0/1:8,0:8:4.37:4,0,73	0/0:10,0:6:14.83:0,15,135	0/0:5,0:2:2.94:0,3,18	0/0:14,0:12:11.90:0,12,154	0/0:12,0:12:25.95:0,26,162	0/0:5,0:4:8.61:0,9,47	0/0:39,0:32:72.25:0,72,821	0/1:12,0:9:25.95:26,0,85	0/0:9,0:8:21.84:0,22,125	0/1:16,0:16:56.74:57,0,124	0/1:8,0:7:6.85:7,0,42	0/0:6,0:6:11.87:0,12,104	0/0:8,0:7:20.36:0,20,140	1/1:8,4:12:19.02:251,19,0	0/1:15,0:15:58.17:58,0,98	0/0:13,0:7:18:0,18,225	0/0:11,0:10:24.07:0,24,316	0/0:16,0:14:41.69:0,42,510	0/0:10,0:9:15.08:0,15,133	0/0:3,0:2:6.02:0,6,88	0/1:7,0:7:29.20:29,0,59	0/1:12,0:11:11.83:12,0,60	0/0:7,0:4:2.04:0,2,6	0/1:15,0:14:24.07:24,0,82	0/1:16,0:16:36.47:36,0,117	0/0:13,0:11:1.86:0,2,177	0/0:6,0:4:6.15:0,6,28
chr10	30554460	.	A	ATTTT	8394.99	PASS	AB=0.849;AC=41;AF=0.732;AN=56;BaseQRankSum=0.316;DP=497;FS=29.737;HRun=12;HaplotypeScore=121.1494;InbreedingCoeff=0.7107;MQ=71.49;MQ0=0;MQRankSum=-7.113;QD=21.47;ReadPosRankSum=-1.990;VQSLOD=0.8173;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,8:25:38.96:627,39,0	1/1:4,2:11:21.07:343,21,0	0/1:28,0:16:29.70:30,0,187	0/1:22,0:16:4:4,0,36	1/1:10,13:29:48.59:856,49,0	1/1:5,7:16:19.16:425,19,0	1/1:9,6:19:30.01:513,30,0	0/0:6,0:16:26.76:0,27,211	1/1:5,3:10:12.04:230,12,0	1/1:14,6:23:20.98:365,21,0	1/1:9,6:21:38.91:633,39,0	1/1:5,4:13:15.05:278,15,0	1/1:8,8:18:17.97:321,18,0	1/1:6,8:14:21.07:475,21,0	0/1:4,0:23:34.57:242,0,35	1/1:5,3:12:21.07:403,21,0	0/0:6,0:21:44.79:0,45,385	0/0:0,0:3:5.99:0,6,47	0/0:11,0:25:41.69:0,42,329	0/0:4,0:23:50.67:0,51,400	0/0:5,0:18:44.75:0,45,363	1/1:7,3:12:14.88:238,15,0	1/1:9,9:21:33.11:659,33,0	1/1:5,6:17:24.04:405,24,0	1/1:8,7:17:24.08:513,24,0	1/1:15,3:19:11.93:176,12,0	1/1:8,4:13:23.29:432,23,0	1/1:3,0:8:12.04:228,12,0
chr10	30554618	.	A	AAT	5583.24	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=8.619;DP=467;FS=5.737;HRun=0;HaplotypeScore=144.5155;InbreedingCoeff=0.9724;MQ=66.45;MQ0=10;MQRankSum=-1.680;QD=17.95;ReadPosRankSum=1.779;VQSLOD=4.7468;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,0:10:8.99:83,9,0	1/1:10,0:10:23.72:199,24,0	0/0:34,0:21:46.40:0,46,425	0/0:32,0:16:19.75:0,20,222	1/1:24,1:25:26.96:287,27,0	1/1:14,2:16:21.04:264,21,0	1/1:16,1:17:17.94:169,18,0	0/0:17,0:17:41.98:0,42,449	1/1:17,0:17:26.93:239,27,0	1/1:30,0:30:83.88:916,84,0	1/1:16,2:18:23.97:218,24,0	1/1:10,1:11:23.96:248,24,0	1/1:12,1:13:30.04:350,30,0	1/1:11,1:12:17.94:173,18,0	1/1:19,0:19:29.54:367,30,0	1/1:12,1:13:20.78:160,21,0	0/0:20,0:20:60.03:0,60,693	0/0:6,0:5:14.97:0,15,155	0/0:21,0:19:57.03:0,57,583	0/0:13,0:13:35.73:0,36,395	0/0:13,0:13:33:0,33,336	1/1:19,1:20:23.91:222,24,0	1/1:11,2:13:17.99:190,18,0	1/1:10,0:10:11.94:92,12,0	1/1:17,0:17:30.02:332,30,0	1/1:19,0:19:50.97:560,51,0	1/1:13,1:14:28.52:315,29,0	1/1:6,0:6:18.01:199,18,0
chr10	30554619	.	A	ATATC	7507.03	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=7.878;DP=552;FS=4.781;HRun=0;HaplotypeScore=178.2158;InbreedingCoeff=0.9730;MQ=61.93;MQ0=12;MQRankSum=-4.414;QD=19.15;ReadPosRankSum=1.456;VQSLOD=4.5618;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,1:15:9:102,9,0	1/1:7,9:16:24.97:284,25,0	0/0:34,0:21:49.16:0,49,439	0/0:32,0:16:20.02:0,20,222	1/1:29,2:31:29.73:363,30,0	1/1:17,1:19:27.07:499,27,0	1/1:20,0:20:17.95:209,18,0	0/0:19,0:19:27.44:0,27,507	1/1:18,0:17:26.93:264,27,0	1/1:32,1:34:93.18:1250,93,0	1/1:21,0:21:23.09:241,23,0	1/1:16,1:15:24.43:285,24,0	1/1:14,3:17:29.35:507,29,0	1/1:12,1:14:17.94:164,18,0	1/1:23,0:24:31.28:503,31,0	1/1:10,3:13:20.75:181,21,0	0/0:20,0:20:60.08:0,60,890	0/0:6,0:5:14.98:0,15,200	0/0:21,0:19:57.03:0,57,659	0/0:12,0:12:35.74:0,36,498	0/0:16,0:16:34.21:0,34,406	1/1:23,2:24:23.38:200,23,0	1/1:15,1:16:17.98:239,18,0	1/1:11,1:12:11.96:136,12,0	1/1:25,2:25:29:425,29,0	1/1:21,3:23:56.93:778,57,0	1/1:18,1:20:35.36:610,35,0	1/1:8,0:7:18.01:265,18,0
chr10	30554648	.	TCACACA	T	969.11	PASS	AB=0.855;AC=21;AF=0.404;AN=52;BaseQRankSum=2.504;DP=503;FS=5.521;HRun=0;HaplotypeScore=209.2545;InbreedingCoeff=0.0374;MQ=40.00;MQ0=15;MQRankSum=-4.931;QD=2.99;ReadPosRankSum=-5.102;VQSLOD=0.9564;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:17,2:16:0.47:0,0,1	0/1:18,1:18:11.29:42,0,11	./.	./.	0/1:28,6:34:0.20:0,0,0	0/1:16,5:21:0.34:0,0,56	0/1:16,5:22:12.54:47,0,13	0/0:19,0:17:17.93:0,18,272	1/1:10,5:14:6.02:104,6,0	0/1:21,0:21:35.61:36,0,150	1/1:19,5:24:0.08:1,0,0	0/0:14,1:13:3.18:0,3,26	0/1:12,5:17:30.44:153,0,30	0/1:12,0:10:12.02:12,0,14	0/0:20,0:21:4.80:0,5,31	0/1:10,8:17:42.72:191,0,43	0/0:21,0:21:38.67:0,39,862	0/0:7,0:4:9:0,9,147	0/0:16,0:16:31.40:0,31,465	0/0:12,0:12:21.07:0,21,530	0/0:21,0:19:17.82:0,18,356	1/1:19,3:21:0.47:1,0,0	0/1:15,8:23:0.22:2,0,0	0/0:7,2:8:2.72:0,3,12	1/1:22,3:23:0.47:2,0,0	0/1:20,2:21:73.83:272,0,74	0/1:17,2:17:62.81:106,0,63	1/1:7,2:8:8.99:133,9,0
chr10	30554678	.	ACT	A	680.25	PASS	AB=0.934;AC=30;AF=0.556;AN=54;BaseQRankSum=3.764;DP=517;FS=10.688;HRun=0;HaplotypeScore=197.5273;InbreedingCoeff=-0.1462;MQ=32.58;MQ0=22;MQRankSum=-4.924;QD=1.65;ReadPosRankSum=1.878;VQSLOD=1.9886;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:20,0:18:0.01:0,0,1	0/1:16,1:16:10.71:11,0,20	0/0:22,0:1:2.92:0,3,17	./.	1/1:19,1:20:0.37:1,0,0	0/1:32,1:32:11.10:61,0,11	0/1:23,1:24:19.43:19,0,26	0/0:19,0:17:38.87:0,39,378	1/1:13,1:13:5.99:60,6,0	0/1:14,0:14:10.13:10,0,154	0/1:20,1:24:0.12:1,0,0	1/1:12,1:12:4.31:32,4,0	1/1:17,1:18:21.09:161,21,0	0/1:21,1:20:22.90:23,0,28	1/1:18,0:18:0.42:1,0,0	0/1:21,0:21:21.76:72,0,22	0/1:20,0:20:22.97:23,0,375	0/1:10,0:7:53.17:53,0,89	0/1:20,1:21:34.96:35,0,340	0/0:14,0:14:8.62:0,9,256	0/0:19,0:18:5.43:0,5,253	1/1:17,2:17:0.37:1,0,0	1/1:19,0:21:0.71:1,1,0	0/0:11,0:10:2.89:0,3,24	1/1:18,1:17:0.61:15,1,0	0/1:15,2:17:99:137,0,110	0/1:17,1:16:47.64:72,0,48	0/1:3,3:5:5.19:29,0,5
chr10	30554683	.	CACAT	C	839.37	PASS	AB=0.973;AC=27;AF=0.482;AN=56;BaseQRankSum=4.862;DP=513;FS=4.542;HRun=0;HaplotypeScore=200.2968;InbreedingCoeff=0.1030;MQ=33.03;MQ0=23;MQRankSum=-6.042;QD=2.52;ReadPosRankSum=3.144;VQSLOD=2.5467;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:17:2.68:0,3,12	0/1:15,0:14:8.36:10,0,8	0/0:22,0:1:3.01:0,3,32	0/0:22,0:1:0:0,0,0	1/1:19,0:19:0.47:1,0,0	0/1:31,1:31:12:12,0,18	0/1:23,0:23:16.89:54,0,17	0/0:21,0:18:47.11:0,47,1064	1/1:15,0:14:5.35:93,5,0	0/0:11,0:11:2.01:0,2,191	0/1:21,3:24:0.01:1,0,0	1/1:14,0:12:1.55:9,2,0	1/1:19,0:19:15.83:204,16,0	0/1:22,0:20:24.11:24,0,51	1/1:19,0:19:0.47:1,0,0	0/1:22,1:22:24.56:155,0,25	0/0:22,0:22:23.08:0,23,692	0/1:10,0:7:20.49:20,0,188	0/0:19,0:19:42.24:0,42,726	0/0:13,0:13:28.73:0,29,598	0/0:19,0:18:38.05:0,38,624	1/1:19,0:17:0.47:1,0,0	1/1:18,2:20:1:2,1,0	0/0:12,0:11:2.40:0,2,9	1/1:18,0:16:0.42:14,0,0	0/1:15,1:15:86.08:194,0,86	0/1:19,0:18:99:117,0,133	1/1:6,0:5:6.90:71,7,0
chr10	30554685	.	CAT	C	556.18	PASS	AB=0.960;AC=27;AF=0.500;AN=54;BaseQRankSum=4.013;DP=515;FS=1.414;HRun=0;HaplotypeScore=196.1948;InbreedingCoeff=-0.0362;MQ=33.17;MQ0=23;MQRankSum=-5.292;QD=1.57;ReadPosRankSum=2.881;VQSLOD=2.7988;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:16:2.36:0,2,9	0/1:14,1:14:5.45:14,0,5	0/0:22,0:1:3.01:0,3,52	./.	1/1:19,1:20:0.37:1,0,0	0/1:32,0:31:17.14:33,0,17	0/1:22,1:23:12.18:33,0,12	0/0:22,0:19:50.07:0,50,875	1/1:14,1:14:2.81:54,3,0	0/0:11,0:11:0.98:0,1,117	0/1:23,1:24:0.12:1,0,0	1/1:14,0:12:2.43:28,2,0	1/1:18,1:19:14.75:133,15,0	0/1:21,0:19:26.28:26,0,38	1/1:19,0:19:0.41:1,0,0	0/1:23,0:22:9.82:73,0,10	0/1:21,0:21:26.60:27,0,473	0/1:9,0:7:20.82:21,0,134	0/0:18,0:18:9.09:0,9,505	0/0:14,0:14:17.15:0,17,431	0/0:20,0:19:30.16:0,30,451	1/1:18,1:17:0.36:1,0,0	1/1:20,0:20:0.69:1,1,0	0/0:14,0:13:2.87:0,3,20	1/1:17,1:16:0.47:13,0,0	0/1:15,1:15:69.20:117,0,69	0/1:18,2:20:90.34:90,0,98	0/1:5,1:5:6.73:27,0,7
chr10	30554687	.	T	TAC	2186.88	PASS	AB=0.871;AC=32;AF=0.571;AN=56;BaseQRankSum=7.915;DP=530;FS=2.152;HRun=0;HaplotypeScore=199.8646;InbreedingCoeff=0.5739;MQ=33.44;MQ0=22;MQRankSum=-8.303;QD=6.06;ReadPosRankSum=0.237;VQSLOD=3.4888;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:16,3:17:0.22:0,0,2	1/1:11,4:14:6.02:66,6,0	0/0:22,0:1:3:0,3,29	0/1:22,0:1:0:0,0,0	0/1:17,5:22:0.09:0,0,0	1/1:25,7:32:11.98:171,12,0	1/1:18,4:22:14.47:173,14,0	0/0:23,0:20:43.98:0,44,524	1/1:7,9:15:11.72:159,12,0	1/1:11,2:13:3.30:155,3,0	0/1:16,9:25:0.14:0,0,0	1/1:9,6:13:5.66:43,6,0	1/1:9,9:18:23.63:229,24,0	1/1:17,4:19:4.67:78,5,0	0/1:20,0:20:0.07:0,0,0	1/1:16,7:22:24.08:347,24,0	0/0:20,0:20:29.48:0,29,291	0/0:9,0:7:9.50:0,9,108	0/0:18,0:18:39.05:0,39,440	0/0:16,0:16:4.64:0,5,283	0/0:21,0:20:35.55:0,36,378	0/1:17,4:19:0.02:0,0,0	0/0:11,10:21:0.05:0,0,1	1/1:8,6:13:3.01:48,3,0	1/1:12,7:17:5.52:93,6,0	1/1:13,4:16:28.77:431,29,0	0/1:16,4:19:7.78:271,0,8	1/1:4,2:5:8.51:84,9,0
chr10	30554697	.	CAGAAAGAG	C	2079.16	PASS	AB=0.822;AC=28;AF=0.500;AN=56;BaseQRankSum=7.128;DP=505;FS=0.000;HRun=0;HaplotypeScore=203.3328;InbreedingCoeff=0.3776;MQ=34.96;MQ0=19;MQRankSum=-6.659;QD=6.54;ReadPosRankSum=2.872;VQSLOD=2.4809;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:12,5:17:7.16:0,7,33	0/1:7,1:7:2.06:93,0,2	1/1:22,0:1:2.04:6,2,0	0/0:23,0:1:0.47:0,0,1	0/0:12,6:19:2.87:0,3,11	0/1:16,13:32:18.61:59,0,19	1/1:13,4:18:8.33:254,8,0	0/0:25,0:23:26.46:0,26,859	1/1:11,2:14:2.96:90,3,0	1/1:11,1:13:20.57:319,21,0	0/1:17,7:25:0.10:0,0,2	0/1:17,1:16:6.21:128,0,6	1/1:12,3:15:14.12:201,14,0	0/1:11,10:22:8.18:67,0,8	0/1:17,0:18:0.18:0,0,0	1/1:18,4:22:20.85:207,21,0	0/0:19,0:19:30.14:0,30,1017	0/0:8,0:7:21.05:0,21,636	0/1:18,0:18:3.95:4,0,885	0/0:19,0:19:44.91:0,45,1063	0/0:18,0:18:42.90:0,43,1151	0/0:12,6:16:0.82:0,1,3	0/0:17,2:20:4.34:0,4,14	1/1:6,5:10:2.70:12,3,0	1/1:13,2:14:3.12:52,3,0	1/1:10,6:16:15.67:462,16,0	0/1:12,7:20:8.93:237,0,9	1/1:6,0:5:8.83:55,9,0
chr10	30554701	.	AAGAGAGAGAG	A	3211.66	PASS	AB=1.000;AC=35;AF=0.625;AN=56;BaseQRankSum=6.941;DP=487;FS=3.437;HRun=0;HaplotypeScore=201.3869;InbreedingCoeff=0.7378;MQ=37.69;MQ0=14;MQRankSum=-7.219;QD=10.53;ReadPosRankSum=-5.999;VQSLOD=1.0058;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:16,2:17:20.53:139,21,0	1/1:6,1:6:5.29:90,5,0	0/0:20,0:2:2.04:0,2,6	0/0:24,0:2:3.48:0,3,33	1/1:16,0:17:10.62:64,11,0	1/1:28,1:30:33.96:305,34,0	1/1:12,0:12:14.17:255,14,0	0/0:26,0:25:43.69:0,44,1212	1/1:15,0:14:5.98:105,6,0	1/1:6,7:13:24.06:479,24,0	1/1:22,1:24:3.13:105,3,0	1/1:11,6:15:7.20:166,7,0	1/1:15,0:15:11.77:179,12,0	1/1:17,2:19:34.53:301,35,0	0/0:9,0:18:14.36:0,14,88	1/1:16,3:19:20.79:255,21,0	0/0:19,0:21:36.12:0,36,1354	0/0:8,0:7:18.06:0,18,754	0/0:21,0:21:36.04:0,36,1110	0/0:18,0:19:35.22:0,35,1464	0/0:18,0:18:39.01:0,39,1537	1/1:14,1:15:15.20:100,15,0	1/1:20,0:21:6.81:42,7,0	1/1:11,0:10:8.91:61,9,0	1/1:13,3:14:9.89:80,10,0	1/1:16,0:16:5.94:395,6,0	0/1:19,0:18:3.40:286,0,3	0/0:6,0:5:2.60:0,3,10
chr10	30555169	.	AG	A	455.63	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.988;DP=577;FS=4.476;HRun=8;HaplotypeScore=57.7663;InbreedingCoeff=0.9778;MQ=90.37;MQ0=1;MQRankSum=-0.492;QD=20.71;ReadPosRankSum=1.331;VQSLOD=3.6854;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:84.24:0,84,1002	0/0:6,0:6:15.04:0,15,171	0/0:24,0:24:57.16:0,57,668	0/0:24,1:24:38.97:0,39,417	0/0:22,0:22:57.17:0,57,689	0/0:23,0:23:66.20:0,66,796	0/0:17,0:17:45.14:0,45,544	0/0:28,0:28:57.14:0,57,657	0/0:19,0:19:57.17:0,57,677	0/0:31,0:31:84.22:0,84,996	0/0:14,0:14:39.10:0,39,450	0/0:11,0:11:30.08:0,30,351	0/0:16,0:16:48.12:0,48,548	0/0:14,0:14:36.11:0,36,435	1/1:1,21:22:57.09:550,57,0	0/0:23,0:23:63.19:0,63,761	0/0:24,0:24:66.20:0,66,795	0/0:9,0:9:24.06:0,24,278	0/0:18,0:18:45.14:0,45,544	0/0:22,0:22:63.19:0,63,761	0/0:19,0:19:54.17:0,54,653	0/0:25,0:25:66.20:0,66,797	0/0:20,0:20:54.17:0,54,652	0/0:22,0:22:63.19:0,63,761	0/0:28,0:28:75.23:0,75,906	0/0:36,0:36:99:0,99,1186	0/0:20,0:20:54.16:0,54,642	0/0:7,0:7:21.06:0,21,254
chr10	30555395	.	GATAGATAGATAGATAA	G	1391.57	PASS	AB=0.991;AC=10;AF=0.185;AN=54;BaseQRankSum=0.279;DP=569;FS=3.143;HRun=0;HaplotypeScore=226.8112;InbreedingCoeff=-0.0042;MQ=57.75;MQ0=11;MQRankSum=2.768;QD=8.54;ReadPosRankSum=-0.606;VQSLOD=2.6989;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:21:20.38:219,0,20	0/0:10,0:10:14.83:0,15,409	0/0:5,0:5:15.02:0,15,150	./.	0/0:33,0:33:28.42:0,28,248	0/1:18,0:18:11.33:261,0,11	0/1:11,0:11:61.85:81,0,62	0/0:47,0:38:97.49:0,97,775	1/1:2,20:22:11.52:149,12,0	0/1:28,0:28:99:210,0,746	0/0:34,0:34:23.15:0,23,512	0/1:12,1:13:28.83:29,0,79	0/0:16,0:16:6.02:0,6,88	0/1:13,0:13:71.73:122,0,72	0/0:20,0:20:60.17:0,60,2695	0/0:16,0:16:15.52:0,16,430	0/0:16,0:16:36.01:0,36,911	0/0:16,0:13:34.28:0,34,1042	0/0:8,0:6:17.98:0,18,497	0/0:33,0:31:69.01:0,69,1747	0/0:11,0:11:27:0,27,663	0/0:26,0:26:12.51:0,13,171	0/0:30,0:30:14.68:0,15,90	0/1:5,0:5:10:10,0,285	0/0:28,0:28:9.02:0,9,100	0/1:31,0:31:99:456,0,139	0/0:30,0:30:25.98:0,26,284	0/0:26,0:25:9.03:0,9,129
chr10	30555399	.	GATAGATAGATAA	G	4220.13	PASS	AB=1.000;AC=26;AF=0.481;AN=54;BaseQRankSum=-0.253;DP=571;FS=2.699;HRun=0;HaplotypeScore=185.7597;InbreedingCoeff=0.6065;MQ=58.42;MQ0=11;MQRankSum=2.261;QD=13.23;ReadPosRankSum=1.037;VQSLOD=3.8988;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:17,2:18:35.54:553,36,0	0/0:10,0:10:11.90:0,12,195	0/0:10,0:10:30.06:0,30,310	./.	1/1:3,28:31:29.67:364,30,0	1/1:17,0:17:16.27:299,16,0	1/1:11,0:11:17.06:177,17,0	0/0:47,0:38:99:0,108,881	1/1:22,0:22:9.96:169,10,0	0/1:30,0:30:99:253,0,348	0/0:35,0:35:12.06:0,12,171	1/1:4,9:13:3.40:18,3,0	1/1:1,16:17:2.92:17,3,0	1/1:14,0:14:41.97:684,42,0	0/0:20,0:20:57.13:0,57,1873	0/0:17,0:17:15.48:0,15,184	0/0:15,0:15:35.94:0,36,648	0/0:16,0:13:29.98:0,30,709	0/0:9,0:7:20.97:0,21,413	0/0:31,0:29:71.99:0,72,1280	0/0:14,0:14:35.98:0,36,606	1/1:2,22:25:4.94:30,5,0	0/0:27,0:27:2.07:0,2,5	0/1:5,0:5:12.97:13,0,141	1/1:2,22:24:5.88:36,6,0	1/1:29,2:31:88.74:1514,89,0	0/1:32,0:32:4:82,0,4	0/1:28,0:27:12.09:12,0,17
chr10	30555403	.	GATAGATAA	G	3191.81	PASS	AB=0.904;AC=19;AF=0.339;AN=56;BaseQRankSum=1.432;DP=573;FS=3.293;HRun=0;HaplotypeScore=157.3529;InbreedingCoeff=0.4781;MQ=58.92;MQ0=8;MQRankSum=2.833;QD=12.04;ReadPosRankSum=2.267;VQSLOD=2.8984;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:19:20.53:322,21,0	0/0:11,0:11:9.14:0,9,39	0/0:11,0:11:33.06:0,33,337	0/0:2,0:1:3.01:0,3,37	0/1:28,0:28:64.82:65,0,66	1/1:17,0:17:30.25:335,30,0	0/1:11,0:11:2.16:101,0,2	0/0:48,0:42:99:0,119,994	1/1:22,0:22:8.85:64,9,0	0/1:30,0:30:7.19:400,0,7	0/0:34,0:34:9.65:0,10,37	0/0:12,0:12:2.96:0,3,19	0/0:17,0:17:2.96:0,3,19	1/1:15,0:15:8.51:293,9,0	0/0:21,0:21:57.16:0,57,1531	0/0:18,0:18:5.49:0,5,25	0/0:15,0:15:17.99:0,18,481	0/0:16,0:13:0.19:0,0,400	0/0:9,0:7:20.95:0,21,291	0/0:31,0:29:52.96:0,53,968	0/0:15,0:15:39.01:0,39,493	0/0:24,0:25:6.37:0,6,39	1/1:2,26:28:18.14:320,18,0	0/1:5,0:5:9.80:103,0,10	0/0:23,0:23:5.91:0,6,38	1/1:30,0:30:47.09:808,47,0	1/1:4,27:31:21.13:418,21,0	0/1:2,26:27:15.77:149,0,16
chr10	30555407	.	GATAA	G	3550.92	PASS	AB=1.000;AC=28;AF=0.500;AN=56;BaseQRankSum=4.573;DP=573;FS=4.565;HRun=0;HaplotypeScore=130.0386;InbreedingCoeff=0.4305;MQ=59.08;MQ0=7;MQRankSum=2.929;QD=9.92;ReadPosRankSum=4.525;VQSLOD=2.4658;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:20:34.95:246,35,0	1/1:0,10:10:12.51:221,13,0	0/0:11,0:11:33.06:0,33,337	0/0:2,0:1:3.01:0,3,37	0/1:28,0:28:60.14:60,0,69	1/1:18,0:18:47.96:424,48,0	0/1:10,0:10:5.05:124,0,5	0/0:51,0:47:99:0,134,1138	1/1:22,0:22:2.77:17,3,0	1/1:3,27:30:77.64:748,78,0	1/1:1,31:32:14.72:260,15,0	0/0:11,0:11:2.97:0,3,20	0/0:17,0:17:2.97:0,3,20	0/1:16,0:16:22.21:211,0,22	0/0:20,0:20:57.13:0,57,1027	1/1:3,15:18:5.77:113,6,0	0/1:16,0:16:29.62:30,0,306	0/1:15,0:12:31.62:32,0,266	0/0:10,0:8:23.94:0,24,248	0/0:32,0:30:46.33:0,46,622	0/0:15,0:15:39.46:0,39,390	0/0:24,0:24:6.38:0,6,39	1/1:28,0:28:16.75:105,17,0	1/1:3,2:5:14.95:181,15,0	0/0:22,0:22:5.93:0,6,40	0/1:30,0:30:68.81:526,0,69	1/1:31,0:31:17.66:161,18,0	1/1:28,0:27:9.01:93,9,0
chr10	30556664	.	GA	G	262.27	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.835;DP=420;FS=2.376;HRun=9;HaplotypeScore=41.4790;InbreedingCoeff=0.8182;MQ=72.32;MQ0=1;MQRankSum=-0.644;QD=15.43;ReadPosRankSum=1.487;VQSLOD=3.3241;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:36.09:0,36,405	0/0:2,0:2:6.02:0,6,69	0/0:12,0:11:26.80:0,27,227	0/0:18,0:11:16.07:0,16,176	0/0:28,1:29:44.70:0,45,744	0/0:16,0:16:45.12:0,45,506	0/0:13,0:12:24.07:0,24,277	0/0:40,0:40:99:0,114,1307	0/0:9,0:9:27.06:0,27,301	0/0:24,0:24:69.19:0,69,782	0/0:19,0:19:54.16:0,54,623	0/0:4,0:4:12.02:0,12,128	0/0:9,0:9:24.07:0,24,276	0/0:11,0:11:30.07:0,30,336	1/1:1,16:17:39.02:357,39,0	0/0:12,0:12:36.11:0,36,413	0/0:23,0:23:63.19:0,63,727	0/0:8,0:8:24.07:0,24,276	0/0:14,0:14:35.83:0,36,415	0/0:18,0:18:54.15:0,54,615	0/0:5,0:5:12.02:0,12,129	0/0:6,0:6:15.04:0,15,173	0/0:12,0:12:36.09:0,36,405	0/0:6,0:6:15.04:0,15,173	0/0:22,0:22:58.99:0,59,663	0/0:19,0:19:42.07:0,42,460	0/0:21,0:21:54.15:0,54,614	0/0:17,0:17:48.14:0,48,554
chr10	30556861	.	TTGTGTG	T	1245.63	PASS	AB=0.846;AC=28;AF=0.560;AN=50;BaseQRankSum=3.330;DP=490;FS=2.069;HRun=0;HaplotypeScore=114.9594;InbreedingCoeff=0.3733;MQ=61.80;MQ0=6;MQRankSum=-1.822;QD=5.13;ReadPosRankSum=-1.635;VQSLOD=1.8874;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:1.25:0,1,3	1/1:2,2:4:2.97:20,3,0	./.	./.	0/0:8,7:15:0:0,0,0	0/1:13,0:13:0.07:0,0,0	1/1:17,6:22:2.56:20,3,0	0/0:33,0:32:5.93:0,6,47	1/1:10,1:12:9.01:126,9,0	1/1:18,0:16:4.16:59,4,0	1/1:20,1:22:4.77:16,5,0	0/1:6,0:8:9.13:89,0,9	1/1:7,4:11:12.88:203,13,0	./.	0/0:14,0:17:18.06:0,18,362	1/1:7,11:19:18.90:303,19,0	0/0:15,0:21:21.01:0,21,282	0/0:12,0:15:4.19:0,4,59	1/1:12,0:14:1.74:40,2,0	1/1:9,10:20:17.71:155,18,0	0/0:18,0:21:11.13:0,11,191	1/1:6,1:11:2.71:20,3,0	0/0:11,0:11:6:0,6,67	0/0:19,0:19:0:0,0,0	1/1:16,5:21:5.98:80,6,0	0/1:18,3:21:35.80:54,0,36	0/1:13,5:18:11.95:150,0,12	1/1:3,2:5:3.01:60,3,0
chr10	30557503	.	TTTTATTTATTTA	T	2204.58	PASS	AC=26;AF=0.722;AN=36;BaseQRankSum=1.884;DP=212;FS=4.453;HRun=0;HaplotypeScore=74.2235;InbreedingCoeff=0.5247;MQ=68.41;MQ0=0;MQRankSum=-2.752;QD=21.61;ReadPosRankSum=2.478;VQSLOD=1.4895;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:10,4:14:6.02:140,6,0	./.	./.	./.	1/1:5,2:7:6.02:175,6,0	1/1:2,5:7:12.04:409,12,0	./.	0/0:23,0:23:15.05:0,15,512	1/1:5,2:7:6.02:205,6,0	./.	1/1:4,3:7:6.02:204,6,0	1/1:4,2:6:3.01:102,3,0	1/1:6,0:6:2.99:23,3,0	1/1:6,0:6:3.01:52,3,0	./.	1/1:3,2:5:3.01:102,3,0	0/0:10,0:17:30.09:0,30,1313	0/0:11,0:11:3.01:0,3,174	0/0:11,0:11:9.03:0,9,524	./.	0/0:3,0:3:3.01:0,3,71	./.	1/1:3,1:4:3.01:102,3,0	./.	1/1:10,3:13:9.03:307,9,0	1/1:5,1:6:3.01:102,3,0	1/1:8,6:14:12.04:410,12,0	./.
chr10	30557801	.	TG	T	1629.98	PASS	AB=0.829;AC=49;AF=0.875;AN=56;BaseQRankSum=-3.828;DP=281;FS=19.270;HRun=13;HaplotypeScore=45.6363;InbreedingCoeff=0.0892;MQ=73.17;MQ0=2;MQRankSum=-0.044;QD=6.10;ReadPosRankSum=3.257;VQSLOD=0.5349;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,1:7:7.77:49,8,0	1/1:1,1:2:2.98:22,3,0	0/1:20,0:14:13.10:13,0,95	0/0:14,0:5:7.09:0,7,45	1/1:11,0:11:8.96:47,9,0	1/1:8,1:10:7.98:49,8,0	0/1:7,1:8:12.42:39,0,12	1/1:8,1:9:1.99:5,2,0	1/1:11,3:15:23.52:138,24,0	1/1:8,2:10:5.94:44,6,0	1/1:8,1:9:5.95:44,6,0	1/1:5,0:6:2.49:7,2,0	1/1:9,0:10:13.01:77,13,0	1/1:6,1:7:10.15:65,10,0	1/1:10,0:14:16.07:47,16,0	0/1:6,4:9:14.29:73,0,14	0/1:7,2:9:1.24:54,0,1	1/1:4,2:6:5.93:43,6,0	1/1:8,2:11:9.79:55,10,0	1/1:10,1:11:17.89:131,18,0	1/1:8,1:10:10.94:67,11,0	1/1:1,1:3:8:49,8,0	0/1:7,2:10:11.10:91,0,11	1/1:5,3:8:11.93:88,12,0	1/1:11,2:13:19.85:131,20,0	1/1:8,3:11:18.57:111,19,0	1/1:9,4:13:11.84:87,12,0	1/1:9,4:13:17.81:131,18,0
chr10	30557813	.	GGA	G	386.65	PASS	AB=0.944;AC=19;AF=0.339;AN=56;BaseQRankSum=1.038;DP=232;FS=21.499;HRun=0;HaplotypeScore=50.0341;InbreedingCoeff=-0.1239;MQ=75.18;MQ0=3;MQRankSum=-2.851;QD=3.17;ReadPosRankSum=3.420;VQSLOD=0.1509;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:5,1:6:6.38:23,0,6	1/1:1,0:1:2.60:10,3,0	0/0:25,0:16:7.66:0,8,248	0/1:13,0:5:2.81:3,0,66	1/1:4,2:6:6.80:96,7,0	0/0:9,0:9:21.23:0,21,170	0/0:10,0:10:0.85:0,1,196	0/1:7,1:8:14.68:15,0,106	0/1:11,1:13:81.84:82,0,103	0/1:6,0:6:2.31:2,0,63	0/1:2,0:3:1.77:21,0,2	0/1:4,1:5:2.18:61,0,2	0/1:6,0:7:11.45:30,0,11	0/1:3,0:5:9.46:30,0,9	0/1:11,0:11:9.24:9,0,72	0/1:6,0:6:0.59:1,0,109	0/0:9,0:9:14.40:0,14,86	0/1:4,0:4:18.58:19,0,47	0/1:7,0:7:11.59:12,0,56	0/0:6,1:7:9.77:0,10,46	0/0:11,0:11:15.23:0,15,132	0/0:3,0:3:1.85:0,2,13	0/0:9,0:9:7.67:0,8,77	0/0:9,0:9:18.45:0,18,88	0/1:8,1:10:17.98:56,0,18	0/1:9,1:10:42.25:66,0,42	0/0:9,0:8:16.42:0,16,149	0/0:9,0:9:22.61:0,23,121
chr10	30557814	.	GA	G	965.98	PASS	AB=0.866;AC=28;AF=0.500;AN=56;BaseQRankSum=-0.947;DP=229;FS=128.234;HRun=1;HaplotypeScore=44.2238;InbreedingCoeff=-0.3124;MQ=75.79;MQ0=3;MQRankSum=-0.011;QD=5.89;ReadPosRankSum=9.709;VQSLOD=0.2088;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:7,0:7:13.66:41,0,14	1/1:1,0:1:2.90:16,3,0	0/0:25,0:16:7.20:0,7,157	0/0:12,0:5:3.78:0,4,40	1/1:3,1:5:11.14:64,11,0	0/0:9,0:9:23.34:0,23,162	0/1:8,2:10:6.11:6,0,111	0/0:7,0:7:6.62:0,7,112	0/1:9,2:13:58.75:86,0,59	0/1:6,0:6:8.91:9,0,39	1/1:2,0:3:8.32:50,8,0	0/1:6,0:6:19.54:20,0,29	1/1:3,3:7:16.87:108,17,0	1/1:3,1:5:3.26:41,3,0	0/0:12,0:12:22.51:0,23,155	0/1:6,0:6:22.83:23,0,36	0/1:8,1:9:25.49:28,0,25	0/1:4,0:4:13.30:21,0,13	0/1:6,0:7:30.46:51,0,30	0/1:3,4:7:3.98:107,0,4	0/1:10,1:11:12.08:12,0,95	0/1:4,0:4:18.52:19,0,20	0/1:5,4:9:29.51:93,0,30	0/1:7,2:9:27.25:49,0,27	0/1:5,2:8:3.19:99,0,3	0/1:6,3:10:16.46:78,0,16	0/1:7,1:7:29.73:30,0,51	0/1:7,2:9:40.15:79,0,40
chr10	30561353	.	G	GCACACACA	5243.78	PASS	AB=0.773;AC=28;AF=0.636;AN=44;BaseQRankSum=0.097;DP=567;FS=4.312;HRun=0;HaplotypeScore=157.7290;InbreedingCoeff=0.3969;MQ=53.13;MQ0=4;MQRankSum=-4.607;QD=13.95;ReadPosRankSum=-0.064;VQSLOD=3.9091;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:36:1.94:59,0,2	1/1:5,0:5:5.99:49,6,0	./.	./.	./.	1/1:8,3:15:11.26:235,11,0	1/1:24,0:24:19.22:212,19,0	0/1:22,0:22:42.56:43,0,121	1/1:12,7:21:5.70:228,6,0	1/1:17,14:35:63.82:1316,64,0	0/0:6,7:15:0.47:0,0,1	1/1:10,10:27:14.38:311,14,0	1/1:11,7:19:15.04:394,15,0	./.	0/1:7,1:24:0.11:0,0,1	0/1:8,1:17:1.25:201,0,1	0/0:22,0:22:29.55:0,30,677	0/1:15,0:17:35.69:36,0,567	0/0:13,0:13:5.12:0,5,226	0/0:27,0:30:38.08:0,38,1116	0/0:30,0:34:68.83:0,69,1250	./.	./.	0/1:25,0:41:6.72:57,0,7	1/1:7,8:18:9.29:136,9,0	1/1:27,0:27:60.10:1252,60,0	1/1:6,12:19:18.06:657,18,0	1/1:1,0:1:3.01:59,3,0
chr10	30561393	.	A	ACT	67.14	PASS	AB=0.942;AC=7;AF=0.130;AN=54;BaseQRankSum=7.457;DP=681;FS=7.954;HRun=0;HaplotypeScore=128.4467;InbreedingCoeff=-0.0029;MQ=47.77;MQ0=31;MQRankSum=-4.646;QD=0.49;ReadPosRankSum=-3.132;VQSLOD=1.1414;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:33.04:0,33,435	0/0:3,0:3:6:0,6,68	1/1:42,0:2:0.47:1,0,0	./.	0/0:19,0:19:33.04:0,33,433	0/0:12,0:12:16.93:0,17,193	0/0:27,2:28:7.21:0,7,595	0/0:36,0:36:86.70:0,87,1261	0/0:17,0:16:14.71:0,15,207	0/1:25,0:24:10.79:11,0,362	0/0:16,0:14:17.23:0,17,233	0/0:24,0:24:26.09:0,26,374	0/0:25,0:24:17.12:0,17,517	0/0:16,1:16:9.03:0,9,136	0/0:22,0:22:23.54:0,24,298	0/0:28,0:27:23.88:0,24,600	0/0:25,0:24:66.16:0,66,951	0/0:20,0:20:53.46:0,53,639	0/0:19,0:15:45.11:0,45,591	0/0:35,0:35:96.30:0,96,1395	0/0:65,0:63:99:0,159,2211	0/0:11,0:11:13.29:0,13,186	0/0:10,0:9:12.01:0,12,142	0/0:41,0:39:28.79:0,29,645	0/1:19,0:19:15.55:16,0,289	0/1:22,1:23:99:130,0,475	0/1:24,0:22:6.42:6,0,391	0/1:2,1:3:11:11,0,61
chr10	30562770	.	A	AAAATAAATAAAT	4991.26	PASS	AB=1.000;AC=31;AF=0.738;AN=42;BaseQRankSum=4.539;DP=329;FS=4.391;HRun=0;HaplotypeScore=112.5199;InbreedingCoeff=0.4809;MQ=72.32;MQ0=0;MQRankSum=-7.381;QD=28.85;ReadPosRankSum=-3.205;VQSLOD=3.3351;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:17:12.04:581,12,0	1/1:6,0:6:3.01:169,3,0	./.	./.	./.	1/1:10,3:13:9.03:449,9,0	1/1:5,0:5:3.01:174,3,0	0/0:27,0:27:21.04:0,21,317	1/1:10,0:10:9.03:473,9,0	./.	./.	./.	1/1:5,0:5:3.01:108,3,0	1/1:14,0:14:6.02:214,6,0	1/1:9,2:11:9.03:494,9,0	1/1:6,1:7:3.01:174,3,0	0/0:34,0:34:46.97:0,47,1436	0/1:17,0:17:86.32:86,0,855	0/0:18,0:18:12.04:0,12,410	0/0:8,0:8:3.01:0,3,103	0/0:6,0:6:3.01:0,3,102	./.	1/1:6,0:6:3.01:156,3,0	1/1:3,0:3:0.47:1,0,0	1/1:11,4:16:9.03:522,9,0	1/1:8,0:8:3.01:146,3,0	1/1:18,0:19:15.05:801,15,0	1/1:16,0:16:12.04:442,12,0
chr10	30567374	.	GA	G	484.43	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.087;DP=617;FS=0.000;HRun=8;HaplotypeScore=59.8839;InbreedingCoeff=0.9635;MQ=80.09;MQ0=0;MQRankSum=-1.678;QD=19.38;ReadPosRankSum=0.685;VQSLOD=3.3205;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:70.46:0,70,835	0/0:8,0:8:24.07:0,24,290	0/0:19,0:19:40.53:0,41,394	0/0:18,1:19:21.63:0,22,400	0/0:19,0:19:54.17:0,54,651	0/0:25,0:25:72.21:0,72,857	0/0:16,1:17:13.13:0,13,416	0/0:37,0:37:99:0,99,1134	0/0:20,0:20:48.14:0,48,570	0/0:23,0:23:57.17:0,57,676	0/0:30,0:30:84.24:0,84,989	0/0:19,0:19:54.16:0,54,642	0/0:18,0:18:51.14:0,51,596	0/0:21,0:21:57.16:0,57,677	1/1:5,20:25:60.09:579,60,0	0/0:21,0:21:60.18:0,60,724	0/0:32,0:32:87.25:0,87,1037	0/0:17,0:17:48.15:0,48,580	0/0:22,0:22:57.15:0,57,667	0/0:24,0:24:66.20:0,66,797	0/0:23,0:23:66.18:0,66,768	0/0:18,0:18:45.14:0,45,544	0/0:23,0:24:54.03:0,54,631	0/0:8,0:8:21.06:0,21,254	0/0:24,0:24:66.20:0,66,796	0/0:30,0:30:78.21:0,78,906	0/0:39,1:39:85.37:0,85,1312	0/0:8,0:8:21.06:0,21,254
chr10	30567427	.	A	AT	389.82	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-2.869;DP=514;FS=0.000;HRun=8;HaplotypeScore=51.2783;InbreedingCoeff=0.9786;MQ=75.29;MQ0=0;MQRankSum=-0.773;QD=25.99;ReadPosRankSum=1.111;VQSLOD=4.2150;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:69.03:0,69,631	0/0:9,0:9:27.01:0,27,247	0/0:11,0:11:17.81:0,18,139	0/0:10,0:10:20.91:0,21,170	0/0:23,0:23:66.01:0,66,599	0/0:24,0:24:69.04:0,69,632	0/0:12,0:12:26.99:0,27,242	0/0:36,0:36:86.99:0,87,780	0/0:14,0:14:36.02:0,36,329	0/0:18,0:18:51.03:0,51,467	0/0:20,0:20:57.03:0,57,522	0/0:14,0:14:36.02:0,36,330	0/0:13,0:13:36.02:0,36,330	0/0:15,0:15:39.01:0,39,357	1/1:1,14:15:42.12:485,42,0	0/0:16,0:16:39:0,39,352	0/0:29,0:30:74.07:0,74,665	0/0:19,0:19:42.01:0,42,384	0/0:25,0:25:66.02:0,66,601	0/0:18,0:18:48.01:0,48,435	0/0:14,0:14:33.01:0,33,302	0/0:10,0:10:23.99:0,24,214	0/0:23,0:23:63.03:0,63,577	0/0:15,0:15:36.02:0,36,330	0/0:18,0:18:39.01:0,39,357	0/0:31,0:31:84.03:0,84,765	0/0:27,0:27:78.04:0,78,714	0/0:7,0:7:21.01:0,21,192
chr10	30567627	.	AT	A	333.63	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.875;DP=519;FS=5.585;HRun=7;HaplotypeScore=51.5745;InbreedingCoeff=0.9667;MQ=79.75;MQ0=0;MQRankSum=-2.396;QD=20.85;ReadPosRankSum=2.456;VQSLOD=3.1442;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:84.15:0,84,1007	0/0:4,0:4:12.04:0,12,151	0/0:16,1:16:29.98:0,30,328	0/0:20,0:20:41.43:0,41,415	0/0:17,0:16:39.12:0,39,479	0/0:18,0:18:51.16:0,51,642	0/0:11,0:11:30.10:0,30,377	0/0:48,0:48:99:0,123,1491	0/0:19,0:19:57.16:0,57,693	0/0:21,0:21:60.18:0,60,729	0/0:20,0:20:57.16:0,57,691	0/0:17,0:17:45.12:0,45,551	0/0:15,0:15:45.14:0,45,566	0/0:19,0:19:54.17:0,54,679	1/1:0,16:16:42.10:428,42,0	0/0:16,0:16:39.12:0,39,490	0/0:18,0:18:48.06:0,48,543	0/0:15,0:15:39.11:0,39,477	0/0:21,0:21:51.16:0,51,641	0/0:21,0:21:60.18:0,60,741	0/0:10,0:10:27.52:0,28,303	0/0:18,0:18:48.13:0,48,578	0/0:12,0:12:27.09:0,27,339	0/0:21,0:21:60.19:0,60,755	0/0:28,0:28:72.21:0,72,883	0/0:20,0:20:57.14:0,57,660	0/0:15,0:15:45.11:0,45,538	0/0:12,0:12:30.10:0,30,377
chr10	30568198	.	GA	G	132.83	PASS	AB=0.988;AC=19;AF=0.339;AN=56;BaseQRankSum=2.532;DP=578;FS=208.361;HRun=2;HaplotypeScore=322.8435;InbreedingCoeff=-0.0483;MQ=55.62;MQ0=0;MQRankSum=-2.809;QD=0.37;ReadPosRankSum=3.237;VQSLOD=-0.3348;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:29,1:30:35.22:35,0,64	0/0:5,0:5:4.08:0,4,33	0/0:10,0:10:25.96:0,26,200	0/0:9,0:9:14.42:0,14,89	1/1:24,0:24:7.33:24,7,0	0/1:25,0:25:14.71:15,0,65	0/1:26,1:27:22.69:23,0,80	0/0:27,0:27:31.87:0,32,119	0/0:32,0:32:3.50:0,4,89	0/0:24,0:24:18.67:0,19,98	1/1:11,1:12:4.05:23,4,0	1/1:26,0:26:3.14:18,3,0	0/1:27,0:27:4.46:4,0,52	0/1:29,0:29:36.49:36,0,60	0/1:33,0:33:24.75:25,0,44	0/0:21,0:21:5.66:0,6,53	0/0:15,0:15:7:0,7,52	0/0:10,0:10:18.20:0,18,88	0/0:8,0:8:17.06:0,17,111	0/1:21,0:21:12.23:12,0,62	0/1:19,0:18:2.77:3,0,15	0/1:14,1:15:15.08:22,0,15	0/1:18,0:18:21.98:22,0,30	0/0:22,0:22:0.34:0,0,39	1/1:16,0:16:2.38:11,2,0	0/0:33,0:33:31.69:0,32,137	0/1:34,0:34:13.62:14,0,48	0/0:6,0:6:4.09:0,4,33
chr10	30568200	.	AG	A	8958.14	PASS	AB=0.720;AC=53;AF=0.946;AN=56;BaseQRankSum=8.048;DP=570;FS=7.773;HRun=2;HaplotypeScore=292.8282;InbreedingCoeff=-0.0600;MQ=50.58;MQ0=0;MQRankSum=-7.775;QD=15.72;ReadPosRankSum=7.539;VQSLOD=3.7591;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:5,24:29:50.81:457,51,0	1/1:1,4:5:10.49:72,10,0	1/1:7,0:7:6.65:36,7,0	0/1:7,0:7:7.64:41,0,8	1/1:0,23:23:56.20:374,56,0	0/1:4,21:25:3.31:352,0,3	1/1:6,21:27:34.79:407,35,0	1/1:3,25:28:53.84:426,54,0	1/1:3,29:32:36.54:494,37,0	1/1:2,22:24:32.38:381,32,0	1/1:1,10:11:32.50:214,33,0	1/1:1,26:27:79.89:532,80,0	1/1:4,23:27:61.56:449,62,0	1/1:2,26:28:34.23:498,34,0	1/1:4,30:34:69.01:606,69,0	1/1:2,20:22:43.96:375,44,0	1/1:3,12:15:35.49:230,35,0	1/1:1,9:10:3.67:118,4,0	0/1:3,5:8:23.49:78,0,23	1/1:2,19:21:17.63:335,18,0	1/1:2,16:18:44.42:294,44,0	1/1:1,14:15:35.58:247,36,0	1/1:2,16:18:24.66:273,25,0	1/1:3,18:21:20.36:139,20,0	1/1:1,16:17:50.19:328,50,0	1/1:4,29:33:46.24:499,46,0	1/1:3,29:32:91.77:611,92,0	1/1:1,5:6:12.22:93,12,0
chr10	30569139	.	A	ATGTGTGCGTGCGTG	113.56	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.890;DP=770;FS=1.984;HRun=0;HaplotypeScore=285.4425;InbreedingCoeff=0.7055;MQ=72.14;MQ0=2;MQRankSum=-3.215;QD=5.41;ReadPosRankSum=-1.722;VQSLOD=1.9257;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:36:93.26:0,93,3134	0/0:7,0:7:12.04:0,12,478	0/0:43,0:33:32.26:0,32,765	0/0:38,0:29:41.81:0,42,1086	0/0:23,0:23:51.15:0,51,1758	0/0:24,0:24:54.16:0,54,1818	0/0:22,0:22:33.11:0,33,1225	0/0:37,0:36:54.14:0,54,1077	0/0:26,0:26:72.10:0,72,2324	0/0:38,0:38:96.32:0,96,3115	0/0:20,0:20:42.07:0,42,919	0/0:28,0:28:69.20:0,69,2290	0/0:24,0:24:57.18:0,57,1783	0/0:23,0:23:51.16:0,51,1755	1/1:8,13:21:2.17:190,2,0	0/0:26,0:26:66.23:0,66,2330	0/0:40,0:40:99:0,99,2907	0/0:20,0:20:48.14:0,48,1503	0/0:22,0:22:42.10:0,42,818	0/0:17,0:17:36.08:0,36,931	0/0:61,0:60:99:0,144,4669	0/0:27,0:27:60.19:0,60,2088	0/0:36,0:36:93.31:0,93,3287	0/0:32,0:32:39.37:0,39,2266	0/0:20,0:20:45.14:0,45,1508	0/0:27,0:27:66.20:0,66,2188	0/0:24,0:24:48.11:0,48,1431	0/0:7,0:7:12.04:0,12,306
chr10	30571418	.	G	GTACG	340.88	PASS	AB=0.974;AC=9;AF=0.161;AN=56;BaseQRankSum=-2.701;DP=540;FS=22.380;HRun=0;HaplotypeScore=364.1507;InbreedingCoeff=0.0242;MQ=29.64;MQ0=1;MQRankSum=3.729;QD=2.42;ReadPosRankSum=-4.441;VQSLOD=0.5145;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:10,0:10:17.84:18,0,33	0/0:6,0:7:3.36:0,3,46	0/1:13,0:6:43.83:44,0,52	0/1:19,1:13:76.89:77,0,124	0/0:26,0:32:36.71:0,37,300	0/1:12,0:12:44.46:44,0,65	0/0:17,0:17:23.89:0,24,125	1/1:13,0:13:10.08:182,10,0	0/0:16,0:16:43.28:0,43,186	0/1:32,0:33:12.43:12,0,147	0/0:15,0:19:39.22:0,39,222	0/1:28,0:28:60.68:61,0,155	0/0:27,0:27:71.36:0,71,325	0/0:31,0:33:33.11:0,33,287	0/0:26,0:26:17.73:0,18,231	0/0:24,0:24:8.38:0,8,176	0/0:6,0:6:5.09:0,5,19	0/0:2,0:2:1.82:0,2,5	0/0:11,0:11:18.29:0,18,71	0/0:19,0:25:20.03:0,20,260	0/0:14,0:14:7.92:0,8,32	0/0:31,0:33:49.87:0,50,317	0/0:20,0:21:25.18:0,25,185	0/1:10,0:10:34.98:43,0,35	0/0:31,0:34:87.99:0,88,406	0/0:14,0:15:28.82:0,29,113	0/0:23,0:23:34.38:0,34,189	0/0:13,0:14:9.98:0,10,71
chr10	30571430	.	A	AGTGGG	250.11	PASS	AB=0.935;AC=7;AF=0.125;AN=56;BaseQRankSum=9.449;DP=593;FS=0.000;HRun=0;HaplotypeScore=487.4054;InbreedingCoeff=0.0334;MQ=28.06;MQ0=1;MQRankSum=-2.010;QD=1.97;ReadPosRankSum=-4.380;VQSLOD=0.0559;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:8:3.88:0,4,40	0/1:9,1:10:48.56:49,0,215	0/0:11,0:5:12.04:0,12,270	0/0:15,0:9:24.08:0,24,559	0/0:33,1:34:50.84:0,51,1283	0/0:14,0:14:39.13:0,39,753	0/0:19,0:19:36.11:0,36,771	0/0:13,0:13:5.14:0,5,131	0/0:17,0:17:45.15:0,45,1016	0/1:34,6:40:99:260,0,1456	0/1:26,1:27:19.59:20,0,666	0/0:25,0:25:44.65:0,45,1079	0/0:32,0:32:50.69:0,51,1654	0/0:34,2:36:55.55:0,56,1570	0/0:27,0:27:66.10:0,66,1503	0/0:25,0:25:60.20:0,60,1333	0/0:5,0:5:5.98:0,6,140	1/1:1,0:1:3:28,3,0	0/0:16,0:13:27.03:0,27,517	0/1:35,0:35:7.33:7,0,913	0/0:13,0:13:6.02:0,6,137	0/0:32,3:36:14:0,14,1280	0/0:25,2:27:4:0,4,1075	0/0:10,0:11:2.25:0,2,278	0/0:38,0:38:58.66:0,59,1449	0/0:17,0:17:39.60:0,40,855	0/0:26,1:27:60.49:0,60,1438	0/1:13,1:14:3.33:3,0,397
chr10	30571489	.	T	TG	40.29	PASS	AB=0.921;AC=14;AF=0.292;AN=48;BaseQRankSum=2.122;DP=248;FS=0.000;HRun=0;HaplotypeScore=212.3925;InbreedingCoeff=0.3180;MQ=28.01;MQ0=0;MQRankSum=-0.439;QD=0.39;ReadPosRankSum=2.750;VQSLOD=2.4854;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:2,0:2:0.88:0,1,2	0/0:5,0:5:1.33:0,1,3	./.	./.	0/0:10,3:13:2.75:0,3,8	0/0:11,0:11:5.54:0,6,62	0/0:6,2:8:5.10:0,5,44	1/1:6,0:6:4.63:16,5,0	0/0:3,0:3:1.82:0,2,5	0/1:24,2:26:38.59:39,0,694	1/1:8,2:10:2.25:15,2,0	1/1:4,0:4:2.84:14,3,0	0/0:10,0:10:8.47:0,8,63	1/1:13,0:13:5.32:25,5,0	./.	0/0:11,0:11:5.81:0,6,46	0/0:2,0:2:2.96:0,3,20	./.	0/0:6,1:6:9.03:0,9,122	0/1:19,2:21:0.98:34,0,1	1/1:7,0:7:1.25:3,1,0	0/0:15,0:15:1.91:0,2,6	1/1:15,1:16:0.88:16,1,0	0/0:3,0:3:1.75:0,2,4	0/0:17,1:18:1.84:0,2,13	0/0:14,1:15:31.39:0,31,395	0/0:6,0:6:3.31:0,3,185	0/0:6,0:6:3.49:0,3,82
chr10	30572426	.	T	TA	1646.03	PASS	AB=0.833;AC=12;AF=0.214;AN=56;BaseQRankSum=13.790;DP=609;FS=67.566;HRun=0;HaplotypeScore=193.0925;InbreedingCoeff=-0.2928;MQ=38.26;MQ0=0;MQRankSum=-7.662;QD=5.29;ReadPosRankSum=0.711;VQSLOD=1.0390;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:13,1:14:20.60:0,21,228	0/1:8,0:9:0.88:1,0,154	0/0:15,0:9:27.09:0,27,376	0/0:10,0:7:24.55:0,25,335	0/0:22,0:24:23.81:0,24,467	0/0:17,5:22:6.54:0,7,469	0/0:14,8:22:35.37:0,35,420	0/1:25,20:44:99:823,0,661	0/1:14,6:20:14.59:15,0,362	0/1:20,4:24:99:181,0,499	0/1:15,1:17:59.29:59,0,272	0/1:26,6:32:8.92:9,0,738	0/1:29,4:33:53.94:54,0,718	0/0:17,3:20:23.82:0,24,555	0/1:16,9:25:36.06:36,0,487	0/0:29,9:39:63.13:0,63,828	0/0:8,0:9:6.96:0,7,237	0/0:2,0:2:3.01:0,3,42	0/1:14,4:18:85.10:85,0,533	0/0:26,3:30:35.28:0,35,743	0/0:17,1:18:42.12:0,42,498	0/0:23,2:26:20.50:0,21,555	0/1:15,1:16:61.29:61,0,318	0/0:14,3:17:15.68:0,16,203	0/1:28,4:33:52.37:52,0,446	0/1:28,11:39:99:412,0,977	0/0:24,2:26:1.27:0,1,661	0/0:4,0:4:9.03:0,9,125
chr10	30577326	.	TA	T	8932.58	PASS	AB=1.000;AC=41;AF=0.732;AN=56;BaseQRankSum=12.127;DP=477;FS=1.854;HRun=8;HaplotypeScore=70.3083;InbreedingCoeff=0.9342;MQ=72.13;MQ0=0;MQRankSum=-1.859;QD=25.16;ReadPosRankSum=4.337;VQSLOD=5.5699;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,15:16:39.06:377,39,0	1/1:1,8:9:24.04:232,24,0	0/0:9,1:10:24.06:0,24,259	0/1:4,0:4:3.73:4,0,51	1/1:2,19:21:54.08:521,54,0	1/1:1,23:24:69.11:666,69,0	1/1:2,6:8:18.03:174,18,0	0/0:31,0:31:81.24:0,81,968	1/1:1,12:13:36.06:348,36,0	1/1:1,13:14:39.06:377,39,0	1/1:2,24:26:63.09:608,63,0	1/1:1,14:15:42.07:406,42,0	1/1:2,23:25:66.10:637,66,0	1/1:2,20:22:54.08:522,54,0	1/1:1,19:20:57.09:550,57,0	1/1:3,17:20:45.07:435,45,0	0/0:15,0:15:42.12:0,42,496	0/0:17,0:17:48.15:0,48,578	0/0:13,0:13:30.09:0,30,362	0/0:28,0:28:69.20:0,69,824	0/0:8,0:8:24.06:0,24,278	1/1:1,13:14:36.06:348,36,0	1/1:0,17:17:51.08:493,51,0	1/1:0,12:12:33.05:319,33,0	1/1:0,18:19:53.12:499,53,0	1/1:4,17:21:51.08:493,51,0	1/1:3,16:19:48.08:464,48,0	1/1:0,16:16:48.08:464,48,0
chr10	30577399	.	CT	C	4248.93	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=1.609;DP=395;FS=17.918;HRun=1;HaplotypeScore=57.8148;InbreedingCoeff=0.9659;MQ=83.20;MQ0=0;MQRankSum=-2.980;QD=17.78;ReadPosRankSum=-4.963;VQSLOD=2.7055;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,2:14:20.13:210,20,0	1/1:7,1:8:21.41:170,21,0	0/0:19,1:18:35.58:0,36,328	0/0:18,0:17:31.06:0,31,342	1/1:13,2:15:29.23:276,29,0	1/1:11,2:13:30.94:310,31,0	1/1:15,1:16:37.78:311,38,0	0/0:25,0:25:25.04:0,25,419	1/1:11,0:11:16.39:148,16,0	1/1:10,0:10:11.21:88,11,0	1/1:11,3:14:17.87:162,18,0	1/1:14,0:14:36.63:294,37,0	1/1:16,0:16:7.08:221,7,0	1/1:11,0:11:19.58:127,20,0	0/0:14,0:14:41.94:0,42,441	1/1:12,1:13:15.71:185,16,0	0/0:23,0:23:57.10:0,57,692	0/0:13,0:13:23.05:0,23,364	0/0:11,0:11:30.02:0,30,335	0/0:17,0:17:45.08:0,45,506	0/0:15,0:15:42.10:0,42,504	1/1:4,1:5:12.01:122,12,0	1/1:15,0:15:41.89:346,42,0	1/1:10,0:10:20.87:171,21,0	1/1:19,2:21:48.15:412,48,0	1/1:8,1:9:19.67:177,20,0	1/1:12,1:13:28.34:254,28,0	1/1:10,1:11:25.95:264,26,0
chr10	30579793	.	A	AC	1157.84	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-8.554;DP=637;FS=1.500;HRun=2;HaplotypeScore=60.5480;InbreedingCoeff=0.9917;MQ=88.98;MQ0=0;MQRankSum=-2.814;QD=37.35;ReadPosRankSum=1.294;VQSLOD=4.2875;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,138,1697	0/0:11,0:11:33.10:0,33,409	0/0:23,0:23:66.21:0,66,817	0/0:29,0:29:72.76:0,73,839	0/0:26,0:26:72.21:0,72,879	0/0:22,0:22:66.21:0,66,818	0/0:14,0:14:42.12:0,42,507	0/0:29,0:29:72.21:0,72,872	0/0:21,0:21:63.19:0,63,768	0/0:25,0:25:75.24:0,75,930	0/0:17,0:17:51.16:0,51,632	0/0:39,0:39:99:0,114,1388	0/0:22,0:22:66.18:0,66,793	0/0:20,0:20:60.16:0,60,718	1/1:1,30:31:87.29:1253,87,0	0/0:21,0:21:60.19:0,60,744	0/0:17,0:17:51.13:0,51,617	0/0:16,0:16:48.12:0,48,580	0/0:24,0:24:69.22:0,69,855	0/0:21,0:21:57.18:0,57,707	0/0:18,0:18:54.17:0,54,669	0/0:21,0:21:60.19:0,60,742	0/0:25,0:25:75.21:0,75,915	0/0:32,0:32:90.28:0,90,1116	0/0:24,0:24:72.22:0,72,881	0/0:14,0:14:42.13:0,42,520	0/0:23,0:22:69.20:0,69,841	0/0:6,0:6:18.06:0,18,223
chr10	30580594	.	TTGTG	T	11988.06	PASS	AB=0.975;AC=39;AF=0.696;AN=56;BaseQRankSum=8.324;DP=745;FS=0.000;HRun=0;HaplotypeScore=136.0608;InbreedingCoeff=0.8978;MQ=65.13;MQ0=12;MQRankSum=2.588;QD=23.83;ReadPosRankSum=4.675;VQSLOD=4.5760;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:12,24:36:54.14:844,54,0	1/1:1,6:8:12.03:173,12,0	0/1:38,1:21:24:24,0,375	0/0:40,0:26:18.04:0,18,297	1/1:4,19:23:42.10:650,42,0	1/1:6,17:24:26.56:569,27,0	1/1:12,14:26:32.78:533,33,0	0/0:31,0:31:57.60:0,58,1084	1/1:8,13:22:36.12:561,36,0	1/1:7,15:22:41:629,41,0	1/1:6,15:19:33.07:505,33,0	1/1:9,22:32:51.17:803,51,0	1/1:7,21:28:44.67:693,45,0	1/1:9,19:29:41.98:678,42,0	0/0:15,0:21:9.03:0,9,163	1/1:11,19:29:54.18:872,54,0	0/0:35,0:37:59.88:0,60,1324	0/0:26,0:28:44.62:0,45,959	0/0:18,0:17:24.08:0,24,531	0/0:18,0:23:50.63:0,51,1047	0/0:43,0:43:68.88:0,69,1308	1/1:7,19:26:47.92:747,48,0	1/1:6,11:17:29.75:484,30,0	1/1:8,22:32:60.20:949,60,0	1/1:15,24:39:59.99:949,60,0	1/1:5,9:13:27.08:407,27,0	1/1:10,14:24:39.13:627,39,0	1/1:3,7:10:18.06:291,18,0
chr10	30582288	.	C	CTTT	4266.87	PASS	AB=0.730;AC=39;AF=0.696;AN=56;BaseQRankSum=5.323;DP=537;FS=5.202;HRun=12;HaplotypeScore=92.3796;InbreedingCoeff=0.6758;MQ=71.62;MQ0=1;MQRankSum=-1.625;QD=10.14;ReadPosRankSum=-1.708;VQSLOD=1.7943;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:10,0:32:38.02:287,38,0	1/1:6,0:13:14.95:116,15,0	0/0:7,0:9:5.97:0,6,69	0/0:11,0:11:17.98:0,18,182	1/1:8,1:21:31.96:268,32,0	1/1:5,0:18:22.16:162,22,0	1/1:7,0:21:19.66:128,20,0	0/1:27,0:27:44.25:44,0,255	1/1:8,0:15:11.12:86,11,0	1/1:11,0:19:23.74:193,24,0	0/1:4,0:13:6.85:143,0,7	1/1:6,0:17:16.20:131,16,0	1/1:4,2:22:29.66:264,30,0	0/1:7,0:21:7:77,0,7	1/1:5,7:14:19.31:303,19,0	1/1:9,2:26:42.13:380,42,0	0/0:25,0:28:64.43:0,64,721	0/0:12,0:14:33:0,33,352	0/0:12,0:17:1.06:0,1,209	0/0:16,0:18:34.44:0,34,400	0/0:15,0:19:28.85:0,29,468	1/1:5,0:27:53.16:392,53,0	1/1:8,0:17:19.97:143,20,0	1/1:7,0:25:12.14:185,12,0	1/1:3,0:14:17.93:137,18,0	1/1:7,0:26:52.15:460,52,0	1/1:7,0:26:37.14:289,37,0	1/1:0,1:6:6:78,6,0
chr10	30583887	.	CA	C	9579.34	PASS	AB=1.000;AC=41;AF=0.732;AN=56;BaseQRankSum=8.770;DP=586;FS=4.536;HRun=9;HaplotypeScore=66.6630;InbreedingCoeff=0.8694;MQ=75.19;MQ0=1;MQRankSum=-2.881;QD=21.24;ReadPosRankSum=2.656;VQSLOD=5.7227;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,17:21:45.02:412,45,0	1/1:1,12:13:36.02:329,36,0	0/0:20,0:20:48.09:0,48,527	0/1:7,0:7:11.35:11,0,121	1/1:2,27:29:72.02:659,72,0	1/1:2,23:25:63.03:577,63,0	1/1:3,12:15:33.02:302,33,0	0/0:26,0:26:60.17:0,60,683	1/1:1,17:18:45.02:412,45,0	1/1:5,25:30:75.01:681,75,0	1/1:4,20:24:51.01:467,51,0	1/1:1,13:14:36.02:329,36,0	1/1:4,24:28:66.03:604,66,0	1/1:2,16:18:48.02:439,48,0	1/1:32,0:32:8.16:212,8,0	1/1:3,20:23:60.02:549,60,0	0/0:27,0:27:75.22:0,75,866	0/0:11,0:11:33.10:0,33,381	0/0:14,0:14:39.12:0,39,450	0/0:25,0:25:72.20:0,72,823	0/0:11,1:11:2.60:0,3,273	1/1:2,24:27:68.07:610,68,0	1/1:2,22:24:34.42:569,34,0	1/1:1,16:17:45.02:412,45,0	1/1:1,23:24:69.04:632,69,0	1/1:3,16:19:48.02:439,48,0	1/1:3,28:31:78.03:714,78,0	1/1:3,9:12:24.01:220,24,0
chr10	30583896	.	AT	A	1414.24	PASS	AB=0.997;AC=26;AF=0.464;AN=56;BaseQRankSum=14.620;DP=563;FS=10.334;HRun=1;HaplotypeScore=93.7294;InbreedingCoeff=0.1495;MQ=74.23;MQ0=1;MQRankSum=-3.669;QD=3.62;ReadPosRankSum=6.393;VQSLOD=-0.5747;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:19,0:19:15.42:48,0,15	1/1:12,0:12:13.37:41,13,0	0/0:20,0:20:40.70:0,41,715	0/0:8,0:7:0.69:0,1,161	0/1:30,0:30:37.61:38,0,74	1/1:23,0:23:21.12:59,21,0	0/1:13,0:13:7.48:16,0,7	0/0:22,0:22:66.18:0,66,859	0/1:18,0:18:2.57:35,0,3	0/0:28,0:28:7.98:0,8,78	0/1:20,0:20:21.56:24,0,22	0/1:15,0:15:17.01:17,0,17	0/1:26,0:26:3.85:45,0,4	0/1:17,0:17:3.20:46,0,3	1/1:3,23:26:71.96:873,72,0	0/1:24,1:25:42.98:45,0,43	0/0:27,0:27:81.15:0,81,1080	0/0:13,0:13:39.10:0,39,505	0/0:14,0:14:42.13:0,42,568	0/0:29,0:29:86.96:0,87,1113	0/0:11,0:10:19.81:0,20,328	1/1:25,0:25:2.75:62,3,0	0/1:24,0:24:32.61:55,0,33	0/1:17,0:17:14.59:35,0,15	1/1:25,0:25:10.51:46,11,0	0/1:18,0:18:9.97:10,0,34	1/1:29,0:29:12.33:74,12,0	1/1:9,0:9:9.87:28,10,0
chr10	30583952	.	CA	C	71.64	PASS	AB=0.898;AC=9;AF=0.161;AN=56;BaseQRankSum=7.067;DP=590;FS=7.929;HRun=13;HaplotypeScore=95.5967;InbreedingCoeff=0.1146;MQ=70.32;MQ0=2;MQRankSum=-1.613;QD=0.40;ReadPosRankSum=0.578;VQSLOD=-0.6957;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:27:35.15:0,35,467	0/0:8,0:9:19.95:0,20,213	0/1:36,1:20:6.05:6,0,131	0/0:19,0:14:20.14:0,20,134	0/1:33,4:37:57.19:57,0,662	0/0:20,1:21:25.08:0,25,374	0/1:7,1:10:8.62:9,0,149	0/1:26,3:29:2.67:3,0,441	0/0:14,1:15:11.10:0,11,249	0/0:22,1:23:2.03:0,2,337	0/0:21,0:21:47.87:0,48,432	0/1:11,2:14:15.23:15,0,202	0/1:19,2:21:5.11:5,0,322	0/0:15,1:17:22.42:0,22,323	1/1:6,0:18:30.67:103,31,0	0/0:20,1:23:30.87:0,31,453	0/0:29,1:30:50.48:0,50,598	0/0:9,0:9:20.51:0,21,179	0/1:11,0:11:0.76:1,0,151	0/0:28,1:31:49.10:0,49,653	0/0:6,0:6:12:0,12,110	0/0:25,0:26:41.62:0,42,534	0/0:25,1:26:26.16:0,26,407	0/0:15,0:17:38.53:0,39,321	0/0:21,0:23:56.73:0,57,517	0/0:26,1:27:29.09:0,29,425	0/0:27,1:28:16.91:0,17,504	0/0:14,0:14:26.84:0,27,246
chr10	30584505	.	AT	A	7492.76	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=10.619;DP=517;FS=2.332;HRun=10;HaplotypeScore=57.3920;InbreedingCoeff=0.9708;MQ=77.90;MQ0=1;MQRankSum=-1.591;QD=21.23;ReadPosRankSum=3.789;VQSLOD=5.8014;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,24:26:68.98:599,69,0	1/1:1,9:10:26.95:227,27,0	0/0:14,0:12:12.01:0,12,114	0/0:16,0:15:20.40:0,20,199	1/1:3,18:22:53.02:449,53,0	1/1:3,22:25:62.97:547,63,0	1/1:1,13:14:29.99:260,30,0	0/0:30,1:30:49.13:0,49,762	1/1:1,13:14:38.99:339,39,0	1/1:4,23:27:68.94:592,69,0	1/1:1,11:12:32.98:286,33,0	1/1:2,18:20:47.98:417,48,0	1/1:1,19:20:47.99:417,48,0	1/1:1,16:17:35.98:313,36,0	1/1:3,9:12:23.99:208,24,0	1/1:1,12:13:29.99:260,30,0	0/0:24,0:25:59.17:0,59,671	0/0:24,0:24:47.12:0,47,656	0/0:24,0:24:51.12:0,51,554	0/0:27,0:26:72.18:0,72,785	0/0:3,0:3:9.02:0,9,100	1/1:1,13:14:26.98:234,27,0	1/1:2,18:20:44.99:391,45,0	1/1:0,6:6:15:130,15,0	1/1:2,29:31:77.98:677,78,0	1/1:1,17:18:50.96:438,51,0	1/1:0,27:28:73.59:630,74,0	1/1:0,4:4:9:78,9,0
chr10	30585147	.	GA	G	165.76	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.924;DP=411;FS=1.122;HRun=10;HaplotypeScore=42.6408;InbreedingCoeff=0.8854;MQ=63.95;MQ0=7;MQRankSum=0.503;QD=11.05;ReadPosRankSum=1.206;VQSLOD=2.2450;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,2:29:49.15:0,49,770	0/0:9,0:9:27.07:0,27,298	0/0:9,0:7:18.02:0,18,177	0/0:7,0:7:13.71:0,14,118	0/0:16,0:16:29.96:0,30,306	0/0:9,0:10:20.88:0,21,206	0/0:19,0:19:44.95:0,45,479	0/0:22,0:22:37.32:0,37,637	0/0:11,0:11:27.07:0,27,299	0/0:15,0:14:42.10:0,42,450	0/0:14,1:16:41.95:0,42,446	0/0:15,0:14:42.09:0,42,448	0/0:13,0:14:35.93:0,36,379	0/0:14,0:14:39.10:0,39,424	1/1:1,14:15:29.99:260,30,0	0/0:6,0:6:16.60:0,17,170	0/0:24,0:26:71.99:0,72,758	0/0:23,0:24:53.97:0,54,571	0/0:14,1:16:21.91:0,22,452	0/0:16,0:16:33.09:0,33,365	0/0:4,0:4:9.02:0,9,100	0/0:8,0:8:24.06:0,24,266	0/0:7,0:6:18.05:0,18,199	0/0:12,0:13:32.92:0,33,346	0/0:21,0:23:50.76:0,51,511	0/0:19,1:20:31.11:0,31,569	0/0:16,0:15:42.11:0,42,465	0/0:8,0:7:18.04:0,18,191
chr10	30594303	.	TTTTC	T	11733.41	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=9.581;DP=532;FS=8.457;HRun=0;HaplotypeScore=96.1753;InbreedingCoeff=0.9215;MQ=64.41;MQ0=5;MQRankSum=3.761;QD=33.15;ReadPosRankSum=3.517;VQSLOD=4.0989;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,17:22:45.15:737,45,0	1/1:2,10:12:30.10:475,30,0	0/0:22,0:10:12.04:0,12,264	0/0:18,0:16:0.02:0,0,189	1/1:4,22:26:60.16:954,60,0	1/1:1,15:16:39.13:639,39,0	1/1:6,9:15:27.09:442,27,0	0/0:18,0:18:30.10:0,30,685	1/1:7,16:23:39.13:639,39,0	1/1:4,16:20:45.15:731,45,0	1/1:8,20:28:57.19:920,57,0	1/1:3,13:16:24.08:393,24,0	1/1:5,10:15:3.52:487,4,0	1/1:3,17:20:48.16:786,48,0	0/0:15,0:15:45.15:0,45,1093	1/1:1,9:10:20.86:343,21,0	0/0:31,0:31:45.15:0,45,1080	0/0:15,0:15:39.13:0,39,855	0/0:28,0:25:39.08:0,39,808	0/0:24,0:24:48.16:0,48,1138	0/0:6,0:6:12.04:0,12,291	1/1:5,12:17:33.11:526,33,0	1/1:6,9:15:33.11:540,33,0	1/1:3,11:14:30.10:491,30,0	1/1:4,21:25:51.17:836,51,0	1/1:10,12:22:39.13:628,39,0	1/1:5,18:23:51.17:822,51,0	1/1:5,9:14:20.92:343,21,0
chr10	30594389	.	ATCTC	A	570.56	PASS	AB=0.745;AC=10;AF=0.179;AN=56;BaseQRankSum=-0.778;DP=518;FS=4.354;HRun=0;HaplotypeScore=115.1854;InbreedingCoeff=0.5753;MQ=64.85;MQ0=16;MQRankSum=3.522;QD=5.38;ReadPosRankSum=-1.154;VQSLOD=2.0593;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:21.05:0,21,335	0/0:5,0:5:3.01:0,3,62	0/0:29,0:14:8.84:0,9,71	0/0:30,0:15:10.18:0,10,137	0/0:21,0:21:38.92:0,39,653	0/0:17,0:17:21.42:0,21,332	0/0:18,0:18:10.27:0,10,114	1/1:15,5:20:15.03:205,15,0	0/0:24,0:25:36.55:0,37,652	0/0:21,0:21:40.35:0,40,693	0/0:20,0:20:36.12:0,36,628	0/0:22,0:23:32.65:0,33,518	0/0:14,0:15:32.91:0,33,502	0/0:12,0:12:21.07:0,21,414	0/0:13,0:13:12.04:0,12,198	0/0:21,0:21:32.88:0,33,573	1/1:10,1:10:15.05:202,15,0	0/1:10,6:16:42.01:42,0,59	0/1:11,0:15:45.27:180,0,45	1/1:6,17:23:3.01:49,3,0	1/1:7,0:19:3.01:42,3,0	0/0:16,0:16:27.56:0,28,496	0/0:18,0:18:35.94:0,36,600	0/0:14,0:14:23.88:0,24,447	0/0:23,0:23:27.56:0,28,470	0/0:20,0:20:38.13:0,38,626	0/0:21,0:20:45.04:0,45,743	0/0:12,0:12:12.04:0,12,206
chr10	30595906	.	AC	A	575.10	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.950;DP=627;FS=0.000;HRun=1;HaplotypeScore=76.2988;InbreedingCoeff=0.9995;MQ=65.98;MQ0=1;MQRankSum=-2.395;QD=31.95;ReadPosRankSum=1.715;VQSLOD=3.3102;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,114,1430	0/0:11,0:11:33.10:0,33,442	0/0:25,0:19:51.54:0,52,580	0/0:21,0:15:41.49:0,41,478	0/0:28,0:28:84.26:0,84,1129	0/0:13,0:13:36.59:0,37,490	0/0:20,0:19:57.17:0,57,757	0/0:28,0:28:81.19:0,81,993	0/0:17,0:17:51.14:0,51,663	0/0:22,0:22:63.18:0,63,846	0/0:24,0:24:72.21:0,72,939	0/0:15,0:15:45.07:0,45,522	0/0:25,0:25:75.21:0,75,965	0/0:15,0:15:45.12:0,45,580	1/1:0,18:18:48.16:670,48,0	0/0:27,0:27:81.15:0,81,1064	0/0:32,0:32:89.82:0,90,1223	0/0:15,0:15:45.09:0,45,582	0/0:19,0:19:57.16:0,57,743	0/0:27,0:27:81.24:0,81,1077	0/0:14,0:14:42.04:0,42,518	0/0:23,0:23:69.18:0,69,881	0/0:18,0:18:54.16:0,54,699	0/0:24,0:24:72.12:0,72,932	0/0:30,0:30:90.29:0,90,1216	0/0:22,0:22:66.20:0,66,868	0/0:27,0:27:78.16:0,78,1000	0/0:29,0:29:87.24:0,87,1135
chr10	30596168	.	GT	G	815.81	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.381;DP=522;FS=1.443;HRun=7;HaplotypeScore=49.5994;InbreedingCoeff=0.9950;MQ=83.40;MQ0=1;MQRankSum=-2.495;QD=23.31;ReadPosRankSum=0.828;VQSLOD=3.5816;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:51.16:0,51,640	0/0:10,0:10:30.10:0,30,378	0/0:30,0:27:34.03:0,34,622	0/0:18,0:13:30.03:0,30,324	0/0:28,0:28:84.25:0,84,1031	0/0:19,0:19:54.08:0,54,622	0/0:11,0:11:24.06:0,24,287	0/0:32,0:32:87.27:0,87,1073	0/0:18,0:18:54.17:0,54,679	1/1:2,15:17:45.10:459,45,0	1/1:1,17:18:48.07:479,48,0	0/0:15,0:15:36.09:0,36,429	0/0:18,0:18:51.14:0,51,611	0/0:7,0:7:21.05:0,21,251	0/0:24,0:24:66.19:0,66,816	0/0:16,0:16:48.13:0,48,589	0/0:13,0:13:30.08:0,30,363	0/0:16,0:16:45.12:0,45,551	0/0:17,0:17:45.13:0,45,554	0/0:28,0:28:81.19:0,81,965	0/0:9,0:9:27.06:0,27,315	0/0:24,0:24:69.21:0,69,852	0/0:10,0:10:30.09:0,30,366	0/0:14,0:14:36.12:0,36,453	0/0:20,0:20:57.14:0,57,671	0/0:17,0:17:48.15:0,48,604	0/0:36,0:36:99:0,102,1270	0/0:20,0:20:54.17:0,54,668
chr10	30596694	.	C	CCACAA	39175.13	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-14.326;DP=713;FS=15.283;HRun=0;HaplotypeScore=108.7277;InbreedingCoeff=0.9997;MQ=81.68;MQ0=2;MQRankSum=-13.140;QD=80.44;ReadPosRankSum=5.143;VQSLOD=6.3643;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,34:42:99:3231,105,0	1/1:0,9:10:27.56:899,28,0	0/0:23,0:23:66.23:0,66,1439	0/0:22,0:22:58.39:0,58,1214	1/1:2,21:24:53.97:1266,54,0	1/1:2,23:27:69.15:2009,69,0	1/1:4,12:19:45.15:1389,45,0	0/0:32,0:32:93.32:0,93,2026	1/1:3,16:21:54.14:1627,54,0	1/1:3,24:29:84.28:2562,84,0	1/1:3,15:21:51.13:1554,51,0	1/1:1,32:34:99:3214,99,0	1/1:4,23:29:81.28:2598,81,0	1/1:3,25:31:78.22:2450,78,0	0/0:38,0:38:99:0,114,2573	1/1:2,23:27:69.20:2218,69,0	0/0:22,0:22:66.20:0,66,1482	0/0:14,0:14:39.13:0,39,865	0/0:21,0:21:60.21:0,60,1368	0/0:31,0:31:90.27:0,90,2036	0/0:23,0:23:66.23:0,66,1517	1/1:0,25:27:75.17:2274,75,0	1/1:2,26:28:78.18:2270,78,0	1/1:0,22:25:48.16:1594,48,0	1/1:0,17:18:48.16:1536,48,0	1/1:4,15:22:66.23:1943,66,0	1/1:1,36:41:99:3642,114,0	1/1:1,8:9:27.09:898,27,0
chr10	30597519	.	A	AT	406.98	PASS	AC=36;AF=0.720;AN=50;BaseQRankSum=6.381;DP=170;FS=12.684;HRun=0;HaplotypeScore=35.5853;InbreedingCoeff=0.5696;MQ=56.29;MQ0=11;MQRankSum=-2.024;QD=4.73;ReadPosRankSum=4.404;VQSLOD=1.4502;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,0:2:2.49:9,2,0	./.	0/0:12,0:5:6.67:0,7,36	0/0:8,0:2:1.74:0,2,5	1/1:5,0:5:2.36:8,2,0	1/1:4,0:3:7.98:42,8,0	1/1:2,0:2:2.99:24,3,0	0/0:30,0:29:46.63:0,47,519	1/1:3,0:3:5.12:24,5,0	1/1:4,0:4:10.55:55,11,0	1/1:2,0:2:2.90:16,3,0	1/1:5,0:5:8.33:44,8,0	./.	1/1:4,0:4:10.64:57,11,0	./.	1/1:3,0:3:2.89:16,3,0	1/1:3,16:18:0.43:1,0,0	0/0:6,0:5:9.34:0,9,59	0/0:11,0:12:29.69:0,30,234	0/0:9,0:9:20.47:0,20,170	0/0:5,0:4:2.51:0,3,7	1/1:1,0:1:2.37:8,2,0	1/1:3,0:3:8.29:50,8,0	1/1:8,0:4:2.97:20,3,0	1/1:4,0:4:5.38:26,5,0	1/1:5,0:5:10.99:60,11,0	1/1:6,0:5:10.65:58,11,0	1/1:5,0:4:8.34:44,8,0
chr10	30599455	.	C	CT	217.28	PASS	AC=16;AF=0.381;AN=42;BaseQRankSum=-0.125;DP=225;FS=1.559;HRun=1;HaplotypeScore=44.7754;InbreedingCoeff=0.4706;MQ=28.56;MQ0=49;MQRankSum=0.106;QD=3.62;ReadPosRankSum=2.421;VQSLOD=0.3226;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:6:2.96:0,3,20	./.	./.	./.	./.	1/1:7,0:7:3.09:18,3,0	0/0:11,1:9:2.30:0,2,4	0/0:13,0:11:15.88:0,16,152	0/0:4,0:3:2.44:0,2,6	1/1:8,0:5:6.95:61,7,0	0/0:6,0:6:0.47:0,0,1	0/0:2,4:6:3.44:0,3,21	1/1:2,0:7:5.75:41,6,0	./.	0/0:6,0:4:5.93:0,6,39	1/1:4,6:8:5.01:45,5,0	0/0:8,0:6:3.88:0,4,98	0/0:3,0:2:2.04:0,2,6	0/0:7,0:6:14.72:0,15,169	0/0:11,0:11:2.07:0,2,18	1/1:7,0:6:1.27:10,1,0	./.	./.	0/0:4,5:8:2.24:0,2,4	0/0:1,8:9:1.35:0,1,3	1/1:1,7:9:12.93:118,13,0	1/1:10,0:8:2.97:20,3,0	1/1:1,0:1:3.01:31,3,0
chr10	30599459	.	C	CG	146.52	PASS	AB=0.833;AC=12;AF=0.316;AN=38;BaseQRankSum=-0.169;DP=202;FS=5.431;HRun=0;HaplotypeScore=35.3335;InbreedingCoeff=0.4404;MQ=28.62;MQ0=43;MQRankSum=0.506;QD=2.71;ReadPosRankSum=-0.632;VQSLOD=1.6579;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:5,5:8:0:0,0,0	./.	./.	./.	./.	1/1:7,0:7:7.30:46,7,0	1/1:5,4:6:0.77:2,1,0	0/0:12,0:11:18.03:0,18,195	0/0:2,1:2:0.84:0,1,2	1/1:7,0:4:8.35:54,8,0	./.	0/0:5,0:5:0.47:0,0,1	0/0:8,0:7:1.55:0,2,4	./.	./.	0/0:8,0:6:3.48:0,3,18	0/0:7,0:6:16.59:0,17,118	0/0:3,0:2:2.96:0,3,19	0/0:9,0:7:9.86:0,10,153	0/1:12,0:12:7.18:13,0,7	0/0:7,0:6:0.35:0,0,2	./.	0/0:6,0:6:1.55:0,2,4	0/0:7,0:6:0.94:0,1,2	0/0:7,0:7:0.89:0,1,2	1/1:8,0:8:11.69:109,12,0	./.	1/1:1,0:1:3.01:33,3,0
chr10	30599460	.	C	CCGG	322.76	PASS	AB=0.912;AC=31;AF=0.596;AN=52;BaseQRankSum=-1.271;DP=275;FS=9.302;HRun=0;HaplotypeScore=163.7848;InbreedingCoeff=-0.0800;MQ=28.66;MQ0=42;MQRankSum=-0.297;QD=1.48;ReadPosRankSum=-0.641;VQSLOD=1.4801;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:12,0:10:2.01:4,0,2	0/1:1,4:5:0.14:0,0,0	./.	./.	0/1:15,0:14:7.31:7,0,25	0/1:11,0:11:11.26:11,0,12	1/1:13,0:10:3.78:35,4,0	0/1:15,0:14:24.58:47,0,25	0/1:6,0:5:0.85:14,0,1	1/1:13,0:11:6.53:46,7,0	1/1:2,0:7:1.25:3,1,0	1/1:6,0:6:2.29:6,2,0	1/1:10,0:9:5.25:36,5,0	1/1:7,0:7:3.81:19,4,0	0/1:3,4:6:4.82:13,0,5	0/1:13,0:11:5.83:18,0,6	0/0:7,0:6:5.77:0,6,27	0/0:3,0:2:2.98:0,3,21	0/1:5,0:8:24.83:25,0,53	0/1:17,0:17:12.70:16,0,13	1/1:8,0:7:2.66:6,3,0	0/1:9,0:9:11.01:11,0,20	0/0:8,0:8:0.48:0,0,20	0/1:11,0:10:1.62:5,0,2	1/1:10,0:10:4.21:10,4,0	0/1:12,0:11:7.28:86,0,7	0/0:11,0:10:1.62:0,2,11	1/1:1,0:1:3.01:31,3,0
chr10	30599699	.	GA	G	10694.58	PASS	AB=1.000;AC=54;AF=0.964;AN=56;BaseQRankSum=4.710;DP=631;FS=12.288;HRun=1;HaplotypeScore=174.1385;InbreedingCoeff=-0.0382;MQ=74.27;MQ0=3;MQRankSum=-0.050;QD=16.95;ReadPosRankSum=6.576;VQSLOD=3.6467;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:29:79.57:544,80,0	1/1:15,0:15:40.11:263,40,0	0/1:19,0:19:51.26:129,0,51	0/1:15,0:15:43.07:136,0,43	1/1:21,0:21:16.88:344,17,0	1/1:22,0:22:62.07:412,62,0	1/1:35,0:34:87.84:561,88,0	1/1:33,0:32:91.03:463,91,0	1/1:27,0:27:68.73:471,69,0	1/1:32,2:34:95.33:608,95,0	1/1:11,0:11:32.51:225,33,0	1/1:20,0:20:59.28:419,59,0	1/1:28,0:28:36.09:460,36,0	1/1:28,0:28:34.89:423,35,0	1/1:33,0:32:85.98:624,86,0	1/1:30,0:30:85.76:584,86,0	1/1:19,0:19:52.91:344,53,0	1/1:8,0:8:23.63:156,24,0	1/1:5,0:5:14.86:121,15,0	1/1:20,0:20:56.36:412,56,0	1/1:19,0:18:28.65:255,29,0	1/1:19,1:19:53.29:380,53,0	1/1:11,0:11:32.59:220,33,0	1/1:43,0:43:62.90:596,63,0	1/1:14,1:15:38.28:273,38,0	1/1:22,0:22:63.88:384,64,0	1/1:27,0:27:76.78:498,77,0	1/1:22,0:22:59:388,59,0
chr10	30599792	.	AGAGAGAGAGAGAGAG	A	2562.75	PASS	AB=0.971;AC=35;AF=0.648;AN=54;BaseQRankSum=6.453;DP=556;FS=46.557;HRun=0;HaplotypeScore=126.1858;InbreedingCoeff=0.6212;MQ=42.46;MQ0=118;MQRankSum=0.998;QD=7.45;ReadPosRankSum=-0.427;VQSLOD=0.3624;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:18:10.27:117,10,0	./.	0/0:41,0:13:39.11:0,39,481	0/0:47,0:10:27.97:0,28,351	1/1:8,0:3:9.03:114,9,0	1/1:18,0:9:9.02:114,9,0	1/1:19,0:7:2:157,2,0	0/0:35,0:34:89.74:0,90,1095	1/1:20,1:12:16.60:239,17,0	1/1:11,0:9:8.63:83,9,0	1/1:12,0:7:12.03:144,12,0	1/1:16,1:12:7.57:256,8,0	1/1:17,0:10:13.57:188,14,0	1/1:15,0:11:21.07:267,21,0	0/1:28,0:12:99:132,0,334	0/1:26,1:16:4.03:249,0,4	0/0:21,0:16:43.03:0,43,1218	0/0:13,0:12:27.09:0,27,540	0/0:6,0:6:17.42:0,17,233	0/0:15,0:14:33.98:0,34,597	0/0:27,0:26:52.04:0,52,1203	1/1:12,0:5:9.03:114,9,0	1/1:16,0:9:13.28:155,13,0	1/1:28,0:18:9.84:117,10,0	0/1:18,1:12:56.30:64,0,56	1/1:16,0:9:5.47:109,5,0	1/1:20,0:11:5.82:115,6,0	1/1:13,0:2:2.99:23,3,0
chr10	30599806	.	AG	A	3773.06	PASS	AB=0.600;AC=37;AF=0.685;AN=54;BaseQRankSum=5.807;DP=507;FS=109.579;HRun=2;HaplotypeScore=47.9733;InbreedingCoeff=0.8781;MQ=55.97;MQ0=113;MQRankSum=-0.270;QD=12.70;ReadPosRankSum=-0.717;VQSLOD=-0.0328;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,13:11:11.79:152,12,0	./.	0/0:47,0:18:52.03:0,52,642	0/0:55,0:18:45.02:0,45,537	1/1:0,13:8:21.07:267,21,0	1/1:1,14:5:9.03:114,9,0	1/1:5,13:8:8.02:216,8,0	0/0:35,0:34:92.54:0,93,1177	1/1:7,14:11:21.54:267,22,0	1/1:1,7:5:14.89:153,15,0	1/1:2,8:5:12.04:148,12,0	1/1:4,11:9:12.05:101,12,0	1/1:4,15:10:27.09:343,27,0	1/1:2,14:11:27.09:343,27,0	1/1:8,16:8:12.04:153,12,0	1/1:7,18:14:32.94:397,33,0	0/0:16,0:14:39.09:0,39,502	0/0:8,0:8:21.07:0,21,279	0/0:7,0:7:21.07:0,21,278	0/0:14,0:13:35.95:0,36,477	0/0:19,0:18:39.13:0,39,518	1/1:0,11:4:12.04:152,12,0	1/1:1,13:8:18.06:229,18,0	1/1:4,19:12:12.51:153,13,0	1/1:1,13:7:15.05:191,15,0	1/1:2,10:5:15.04:177,15,0	0/1:5,10:6:1.51:103,0,2	1/1:1,6:3:9.03:114,9,0
chr10	30599807	.	G	GA	3791.16	PASS	AC=38;AF=0.704;AN=54;BaseQRankSum=6.182;DP=509;FS=124.620;HRun=1;HaplotypeScore=49.1329;InbreedingCoeff=0.9005;MQ=56.00;MQ0=111;MQRankSum=-0.409;QD=12.72;ReadPosRankSum=-1.316;VQSLOD=0.0645;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:15,3:12:11.87:152,12,0	./.	0/0:47,0:18:51.62:0,52,646	0/0:55,0:18:43.58:0,44,522	1/1:13,0:8:21.07:267,21,0	1/1:15,1:6:9.03:114,9,0	1/1:14,4:8:7.77:216,8,0	0/0:36,0:35:92.29:0,92,1168	1/1:16,5:11:21.07:267,21,0	1/1:7,1:5:14.89:153,15,0	1/1:9,0:4:12.04:148,12,0	1/1:14,1:10:3.41:105,3,0	1/1:15,4:10:27.09:343,27,0	1/1:15,1:11:27.09:343,27,0	1/1:16,5:5:12.04:153,12,0	1/1:23,2:14:31.27:383,31,0	0/0:16,1:15:39.09:0,39,500	0/0:8,0:8:21.07:0,21,280	0/0:7,0:7:21.07:0,21,279	0/0:14,0:13:36.12:0,36,480	0/0:17,1:18:39.11:0,39,521	1/1:12,0:5:12.04:152,12,0	1/1:14,0:8:17.57:228,18,0	1/1:22,1:12:11.99:152,12,0	1/1:15,0:8:15.05:191,15,0	1/1:10,2:5:15.04:177,15,0	1/1:11,3:5:8.80:114,9,0	1/1:8,0:5:14.12:133,14,0
chr10	30600380	.	G	GA	11503.77	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=11.009;DP=610;FS=1.139;HRun=8;HaplotypeScore=101.4547;InbreedingCoeff=0.9936;MQ=75.85;MQ0=0;MQRankSum=-2.721;QD=27.07;ReadPosRankSum=4.196;VQSLOD=4.4915;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,29:31:78.23:900,78,0	1/1:4,13:17:35.65:415,36,0	0/0:18,0:16:30:0,30,272	0/0:12,0:12:31.75:0,32,262	1/1:3,21:24:60.09:659,60,0	1/1:2,24:26:35.72:665,36,0	1/1:2,15:17:39.12:450,39,0	0/0:33,0:33:75.01:0,75,680	1/1:2,15:17:30.09:344,30,0	1/1:2,31:33:93.25:1053,93,0	1/1:2,20:22:54.12:608,54,0	1/1:1,20:21:48.14:554,48,0	1/1:7,27:35:75.03:824,75,0	1/1:4,13:17:11.63:379,12,0	0/0:26,0:26:69.02:0,69,626	1/1:2,14:16:39.12:450,39,0	0/0:27,0:27:78.02:0,78,709	0/0:17,0:17:42.01:0,42,384	0/0:17,0:17:42.02:0,42,384	0/0:26,0:26:66.03:0,66,604	0/0:9,0:9:27.01:0,27,247	1/1:3,14:17:42.12:485,42,0	1/1:2,19:21:57.17:657,57,0	1/1:4,14:18:39.12:450,39,0	1/1:4,34:38:83.96:969,84,0	1/1:1,25:26:72.19:819,72,0	1/1:2,17:18:51.15:585,51,0	1/1:2,8:10:21.06:237,21,0
chr10	30601180	.	T	TAAATACTTAA	643.91	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-0.219;DP=553;FS=6.070;HRun=0;HaplotypeScore=163.1280;InbreedingCoeff=0.9619;MQ=65.07;MQ0=0;MQRankSum=-4.123;QD=37.88;ReadPosRankSum=1.339;VQSLOD=3.1449;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:78.10:0,78,2114	0/0:7,0:7:15.04:0,15,482	0/0:13,0:12:33.09:0,33,578	0/0:10,0:10:27.09:0,27,483	0/0:31,0:31:81.25:0,81,2259	0/0:22,0:22:63.20:0,63,1738	0/0:12,0:12:36.09:0,36,825	0/0:31,0:31:87.26:0,87,1895	0/0:19,0:19:57.18:0,57,1592	0/0:20,0:20:60.19:0,60,1494	0/0:25,0:25:75.25:0,75,2213	0/0:19,0:19:57.19:0,57,1723	0/0:21,0:21:63.18:0,63,1532	0/0:27,0:27:81.24:0,81,2016	1/1:3,13:17:15.05:732,15,0	0/0:16,0:16:48.16:0,48,1179	0/0:20,0:20:54.18:0,54,1361	0/0:10,0:10:27.09:0,27,859	0/0:29,0:29:84.28:0,84,2070	0/0:32,0:32:90.27:0,90,2354	0/0:21,0:21:60.20:0,60,1748	0/0:8,0:8:21.06:0,21,451	0/0:13,0:13:33.09:0,33,687	0/0:15,0:15:45.15:0,45,1337	0/0:25,0:25:66.21:0,66,1897	0/0:18,0:18:54.18:0,54,1393	0/0:27,0:27:78.25:0,78,1966	0/0:13,0:13:36.12:0,36,780
chr10	30602529	.	AATACATAC	A	855.56	PASS	AB=1.000;AC=11;AF=0.220;AN=50;BaseQRankSum=-0.963;DP=746;FS=0.918;HRun=0;HaplotypeScore=205.1024;InbreedingCoeff=0.7045;MQ=67.07;MQ0=3;MQRankSum=-4.142;QD=6.20;ReadPosRankSum=-1.808;VQSLOD=2.5683;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:36:20.97:0,21,413	0/0:12,0:12:21.07:0,21,640	./.	./.	0/0:15,0:30:27.09:0,27,717	0/0:12,0:22:24.07:0,24,650	0/0:23,0:23:45.15:0,45,1564	1/1:40,0:38:14.96:142,15,0	0/0:24,0:25:45.10:0,45,1372	0/0:24,0:35:42.47:0,42,657	0/0:23,0:23:36.11:0,36,1317	0/0:15,0:30:21.04:0,21,489	0/0:15,0:33:24.07:0,24,542	0/0:20,0:31:9.03:0,9,232	0/1:27,0:27:82.66:291,0,83	0/0:15,0:30:33.02:0,33,772	1/1:14,0:14:6.02:109,6,0	1/1:3,3:6:3.01:75,3,0	1/1:15,6:21:12.63:258,13,0	1/1:10,20:30:6.02:131,6,0	./.	0/0:12,0:26:9:0,9,100	0/0:7,0:20:12.01:0,12,258	0/0:17,0:33:8.54:0,9,118	0/0:11,0:24:15.04:0,15,272	0/0:14,0:29:51.08:0,51,964	0/0:9,0:17:14.97:0,15,346	0/0:17,0:19:6.02:0,6,200
chr10	30602611	.	CCA	C	898.88	PASS	AB=0.947;AC=21;AF=0.404;AN=52;BaseQRankSum=4.580;DP=627;FS=1.099;HRun=0;HaplotypeScore=92.9297;InbreedingCoeff=-0.2155;MQ=53.59;MQ0=29;MQRankSum=0.114;QD=2.06;ReadPosRankSum=-0.323;VQSLOD=1.3119;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:33,2:33:26.99:27,0,337	0/1:11,1:12:45.97:46,0,241	./.	./.	0/1:25,2:27:30.18:30,0,390	0/1:20,1:22:22.48:22,0,233	0/1:23,2:25:3.27:3,0,236	0/1:21,0:19:0:0,0,0	0/0:9,0:11:0.88:0,1,130	0/1:15,2:17:25.29:25,0,100	0/1:13,0:13:11.04:11,0,121	0/1:22,1:23:68.86:69,0,206	0/1:26,2:28:99:105,0,242	0/1:25,1:28:32.79:33,0,317	1/1:18,0:18:26.42:160,26,0	0/0:16,1:17:2.61:0,3,353	0/0:17,0:30:9.53:0,10,263	0/0:11,0:11:17.87:0,18,180	1/1:18,0:16:2.88:15,3,0	1/1:21,5:26:29.67:259,30,0	0/1:47,1:48:59.18:59,0,262	0/0:29,0:30:13.70:0,14,369	0/0:20,1:20:27.09:0,27,391	0/1:26,2:27:30.58:31,0,531	0/1:24,1:24:99:112,0,446	0/0:15,0:15:14.05:0,14,136	0/1:17,1:17:45.47:45,0,278	0/0:18,0:19:37.39:0,37,540
chr10	30602652	.	CACAT	C	461.27	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=4.456;DP=672;FS=13.299;HRun=0;HaplotypeScore=117.5294;InbreedingCoeff=0.5636;MQ=64.18;MQ0=18;MQRankSum=-0.295;QD=10.73;ReadPosRankSum=-1.799;VQSLOD=2.0382;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:31:65.32:0,65,943	0/0:15,0:15:44.96:0,45,713	0/0:23,0:14:42.05:0,42,409	0/0:34,0:20:59.93:0,60,556	0/0:30,0:30:83.73:0,84,1173	0/0:23,0:23:50.98:0,51,788	0/0:22,0:21:56.37:0,56,717	0/0:26,0:24:65.74:0,66,571	0/0:14,0:14:17.07:0,17,437	0/0:16,0:16:23.42:0,23,523	0/0:14,0:14:9.94:0,10,418	0/0:18,0:18:10.72:0,11,621	0/0:26,0:26:16.57:0,17,819	0/0:22,0:22:7.32:0,7,788	1/1:1,19:20:26.61:514,27,0	0/0:30,0:30:84.03:0,84,1195	0/0:33,0:30:33.48:0,33,817	0/0:13,0:13:31.46:0,31,441	0/0:12,0:9:20.93:0,21,176	0/1:23,0:22:52.95:53,0,286	0/0:40,0:39:80.65:0,81,1027	0/0:28,0:27:47.94:0,48,935	0/0:21,0:19:51.54:0,52,958	0/0:36,0:34:64.65:0,65,1325	0/0:30,0:29:34.63:0,35,1197	0/0:17,0:17:50.97:0,51,598	0/0:25,0:25:24.75:0,25,901	0/0:29,0:29:61.45:0,61,1340
chr10	30603276	.	CT	C	4556.10	PASS	AB=0.763;AC=40;AF=0.714;AN=56;BaseQRankSum=7.789;DP=667;FS=7.895;HRun=14;HaplotypeScore=78.7141;InbreedingCoeff=0.4792;MQ=67.82;MQ0=1;MQRankSum=1.546;QD=8.11;ReadPosRankSum=5.982;VQSLOD=3.7136;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:10,26:40:36.67:366,37,0	0/1:6,6:13:2.33:121,0,2	0/1:13,1:13:8.89:9,0,86	0/0:13,0:11:2.74:0,3,51	1/1:11,19:33:7.69:317,8,0	0/1:9,16:25:11.13:222,0,11	1/1:6,17:24:15.80:245,16,0	0/1:31,4:36:30.25:30,0,302	1/1:4,16:20:44.57:308,45,0	1/1:9,22:33:44.41:427,44,0	1/1:5,10:17:24.78:155,25,0	1/1:7,18:27:47.68:305,48,0	1/1:7,14:23:30.72:196,31,0	1/1:9,13:22:18.13:124,18,0	1/1:10,0:29:35.05:101,35,0	1/1:10,13:26:49.34:310,49,0	0/1:30,3:37:4.13:4,0,469	0/0:16,0:18:11.60:0,12,124	0/0:26,1:28:18.20:0,18,332	0/0:26,1:27:21.38:0,21,322	0/0:17,1:18:21.81:0,22,310	1/1:8,10:18:26.65:185,27,0	1/1:11,17:28:10.10:216,10,0	1/1:3,11:17:27.82:176,28,0	1/1:7,9:16:10.92:201,11,0	1/1:11,15:27:43.44:288,43,0	1/1:13,17:33:16.76:236,17,0	0/1:2,2:4:14.60:15,0,16
chr10	30604515	.	T	TGTGCGTGC	4707.39	PASS	AB=0.958;AC=35;AF=0.625;AN=56;BaseQRankSum=0.825;DP=529;FS=2.697;HRun=0;HaplotypeScore=157.4322;InbreedingCoeff=0.6324;MQ=72.15;MQ0=1;MQRankSum=-6.407;QD=13.34;ReadPosRankSum=-0.636;VQSLOD=4.1165;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:1.25:0,1,3	1/1:8,2:12:3.01:122,3,0	0/1:31,0:25:0.05:0,0,36	0/0:24,0:20:2.01:0,2,50	1/1:12,0:12:2.94:18,3,0	1/1:21,3:24:9.03:296,9,0	1/1:14,9:29:11.56:287,12,0	0/0:18,0:18:15.03:0,15,222	1/1:12,6:20:6.02:104,6,0	1/1:9,5:14:15.38:429,15,0	0/0:5,1:6:1.25:0,1,3	1/1:13,5:18:15.37:318,15,0	1/1:21,6:28:30.88:717,31,0	1/1:10,12:23:14.35:477,14,0	0/1:27,0:26:11:11,0,405	1/1:18,7:26:36.09:889,36,0	0/0:37,0:37:81.26:0,81,1847	0/0:18,0:18:39.13:0,39,902	0/0:17,0:17:20.97:0,21,398	0/0:15,0:15:30.08:0,30,605	0/0:27,0:27:57.15:0,57,1104	1/1:10,0:10:9.83:69,10,0	0/1:6,1:7:0:0,0,0	1/1:20,3:23:14.07:273,14,0	1/1:6,3:10:3.01:52,3,0	1/1:17,0:17:10.83:143,11,0	1/1:12,4:16:7.85:260,8,0	1/1:2,3:6:6.02:243,6,0
chr10	30605075	.	G	GCGTCTC	1764.19	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.910;DP=667;FS=0.690;HRun=0;HaplotypeScore=174.3295;InbreedingCoeff=0.7943;MQ=94.58;MQ0=0;MQRankSum=-6.138;QD=84.01;ReadPosRankSum=-1.901;VQSLOD=3.7870;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:92.40:0,92,1866	0/0:7,0:7:1.07:0,1,284	0/0:28,0:28:81.27:0,81,1798	0/0:35,0:35:95.79:0,96,1867	0/0:19,0:19:33.20:0,33,892	0/0:13,0:13:39.06:0,39,592	0/0:38,0:38:99:0,105,1702	0/0:27,0:27:75.25:0,75,1798	0/0:21,0:21:43.19:0,43,967	0/0:30,0:30:84.29:0,84,1411	0/0:15,0:15:45.15:0,45,758	0/0:38,0:38:99:0,108,1736	0/0:22,0:22:63.16:0,63,1032	0/0:29,0:29:87.27:0,87,1439	1/1:2,19:21:63.22:1859,63,0	0/0:20,0:20:59.23:0,59,953	0/0:33,0:33:96.33:0,96,2329	0/0:32,0:32:96.30:0,96,2304	0/0:23,0:23:63.22:0,63,1550	0/0:10,0:10:30.09:0,30,690	0/0:39,0:39:99:0,114,2726	0/0:13,0:13:16.12:0,16,538	0/0:14,0:14:22.14:0,22,648	0/0:21,0:21:60.21:0,60,1010	0/0:26,0:26:75.26:0,75,1272	0/0:18,0:18:19.59:0,20,658	0/0:25,0:25:32.20:0,32,1079	0/0:8,0:8:21.07:0,21,369
chr10	30605077	.	A	ATT	882.02	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.262;DP=679;FS=1.633;HRun=1;HaplotypeScore=125.3645;InbreedingCoeff=0.9914;MQ=94.04;MQ0=0;MQRankSum=-7.826;QD=35.28;ReadPosRankSum=-0.147;VQSLOD=3.7876;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,123,1749	0/0:7,0:7:21.04:0,21,287	0/0:28,0:28:80.30:0,80,1177	0/0:35,0:35:96.18:0,96,1286	0/0:20,0:20:54.18:0,54,794	0/0:14,0:14:39.13:0,39,574	0/0:39,0:39:99:0,111,1596	0/0:25,0:25:72.24:0,72,1103	0/0:20,0:20:60.20:0,60,874	0/0:31,0:31:87.26:0,87,1256	0/0:15,0:15:45.15:0,45,663	0/0:37,0:37:99:0,108,1587	0/0:23,0:23:63.21:0,63,927	0/0:29,0:29:87.29:0,87,1273	1/1:5,20:25:75.20:977,75,0	0/0:20,0:20:60.20:0,60,882	0/0:37,0:37:96.32:0,96,1470	0/0:33,0:33:96.29:0,96,1445	0/0:22,0:22:66.22:0,66,1010	0/0:11,0:11:33.08:0,33,463	0/0:42,0:42:99:0,120,1772	0/0:13,0:13:33.11:0,33,485	0/0:15,0:15:42.12:0,42,598	0/0:22,0:22:60.20:0,60,883	0/0:26,0:26:78.25:0,78,1132	0/0:16,0:16:45.15:0,45,662	0/0:26,0:26:69.23:0,69,1015	0/0:7,0:7:21.07:0,21,309
chr10	30606113	.	CTG	C	1469.71	PASS	AB=1.000;AC=35;AF=0.648;AN=54;BaseQRankSum=3.060;DP=235;FS=11.415;HRun=0;HaplotypeScore=32.2937;InbreedingCoeff=0.7486;MQ=57.83;MQ0=21;MQRankSum=3.817;QD=14.70;ReadPosRankSum=-1.160;VQSLOD=1.2713;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,3:3:3.01:42,3,0	1/1:6,0:6:14.21:127,14,0	0/0:26,0:9:22.17:0,22,396	0/0:29,0:11:17.87:0,18,331	0/1:3,0:3:0:0,0,0	1/1:3,3:3:9.03:126,9,0	1/1:10,0:10:8.28:48,8,0	0/0:11,0:10:30.10:0,30,516	1/1:3,2:5:14.87:159,15,0	1/1:4,0:3:8.76:96,9,0	1/1:1,3:4:5.25:22,5,0	1/1:2,1:3:5.90:40,6,0	1/1:0,7:7:6.01:70,6,0	1/1:0,3:3:3.01:42,3,0	0/0:10,0:10:23.04:0,23,257	1/1:0,4:4:6.02:84,6,0	0/0:25,0:23:56.09:0,56,824	0/0:8,0:8:6.15:0,6,216	0/0:11,0:10:24.05:0,24,383	0/0:4,0:4:9.03:0,9,146	0/0:9,0:9:21.05:0,21,330	1/1:1,4:4:5.95:60,6,0	./.	1/1:2,10:10:12.04:168,12,0	1/1:2,0:2:6.02:83,6,0	1/1:1,6:7:18.04:218,18,0	1/1:0,7:7:8.95:85,9,0	1/1:5,4:7:15.04:190,15,0
chr10	30606117	.	GTGGT	G	439.68	PASS	AB=0.882;AC=17;AF=0.315;AN=54;BaseQRankSum=2.369;DP=256;FS=4.499;HRun=0;HaplotypeScore=45.2073;InbreedingCoeff=0.1430;MQ=56.62;MQ0=22;MQRankSum=1.875;QD=5.50;ReadPosRankSum=-0.814;VQSLOD=1.1376;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:4:1.73:29,2,0	0/1:7,0:7:32.42:57,0,32	0/0:24,0:9:21.91:0,22,396	0/0:28,0:11:17.86:0,18,330	0/1:1,1:4:0.10:0,0,0	0/0:7,0:4:2.62:0,3,6	0/1:2,8:11:12.88:44,0,13	0/0:13,0:12:30.10:0,30,516	1/1:4,0:5:6.39:85,6,0	0/1:5,0:4:8.41:8,0,10	0/1:4,0:4:8.73:9,0,12	0/1:3,0:3:9.67:10,0,13	1/1:8,0:8:1.73:26,2,0	0/0:3,0:3:0.89:0,1,2	0/0:10,0:10:24.07:0,24,331	0/0:5,0:5:4.74:0,5,24	0/0:28,0:26:51.75:0,52,1105	0/0:8,0:8:0.88:0,1,246	0/0:11,0:10:24.05:0,24,416	0/0:4,0:4:9.03:0,9,157	0/0:14,0:13:24.08:0,24,505	0/0:5,0:4:3.89:0,4,28	./.	0/0:12,0:10:3.54:0,4,9	0/1:3,0:3:9.41:49,0,9	1/1:9,0:9:17.95:218,18,0	0/1:8,0:8:15.96:16,0,62	0/1:7,0:7:7.57:36,0,8
chr10	30606500	.	C	CT	17818	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-14.035;DP=669;FS=3.690;HRun=2;HaplotypeScore=62.3728;InbreedingCoeff=0.9993;MQ=94.25;MQ0=0;MQRankSum=-5.487;QD=38.73;ReadPosRankSum=4.942;VQSLOD=5.3336;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,32:33:90.30:1294,90,0	1/1:1,12:13:36.12:517,36,0	0/0:32,0:32:82.74:0,83,1029	0/0:29,0:29:65.88:0,66,793	1/1:0,23:23:69.23:993,69,0	1/1:0,19:19:57.19:821,57,0	1/1:1,26:27:72.24:1037,72,0	0/0:29,0:29:78.23:0,78,946	1/1:1,35:36:87.29:1252,87,0	1/1:0,23:23:69.20:957,69,0	1/1:0,20:20:54.18:770,54,0	1/1:0,32:32:93.31:1339,93,0	1/1:0,17:17:48.16:691,48,0	1/1:2,24:26:69.23:994,69,0	1/1:0,23:23:63.21:906,63,0	1/1:1,21:22:60.20:864,60,0	0/0:34,0:34:99:0,102,1264	0/0:15,0:15:45.14:0,45,555	0/0:15,0:15:39.11:0,39,472	0/0:20,0:20:51.16:0,51,632	0/0:35,0:35:99:0,102,1264	1/1:0,22:22:60.20:864,60,0	1/1:3,17:20:39.13:561,39,0	1/1:0,25:25:63.21:907,63,0	1/1:1,20:21:60.20:864,60,0	1/1:2,21:23:60.17:824,60,0	1/1:2,26:28:75.24:1061,75,0	1/1:0,7:7:21.07:302,21,0
chr10	30606678	.	GAGAGACCGAGCACATTTGC	G	2629.54	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.835;DP=658;FS=0.926;HRun=0;HaplotypeScore=316.4315;InbreedingCoeff=0.9979;MQ=83.64;MQ0=0;MQRankSum=-7.021;QD=105.18;ReadPosRankSum=-0.325;VQSLOD=2.2376;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,138,11703	0/0:15,0:15:45.15:0,45,3787	0/0:21,0:21:60.21:0,60,3543	0/0:23,0:23:63.22:0,63,3861	0/0:28,0:28:84.29:0,84,7387	0/0:19,0:19:57.20:0,57,4807	0/0:16,0:16:45.15:0,45,4053	0/0:23,0:23:69.24:0,69,5100	0/0:24,0:24:72.21:0,72,5041	0/0:27,0:27:78.27:0,78,6606	0/0:16,0:16:45.15:0,45,3993	0/0:30,0:30:90.30:0,90,6000	0/0:17,0:17:51.18:0,51,4257	0/0:28,0:28:84.29:0,84,6867	1/1:0,25:25:51.18:2724,51,0	0/0:26,0:26:78.21:0,78,6148	0/0:38,0:38:99:0,111,9393	0/0:17,0:17:51.18:0,51,4338	0/0:19,0:19:57.20:0,57,3854	0/0:27,0:27:78.27:0,78,6475	0/0:21,0:21:63.22:0,63,5550	0/0:18,0:18:54.19:0,54,4755	0/0:29,0:29:84.29:0,84,6611	0/0:19,0:19:57.20:0,57,5031	0/0:23,0:23:69.23:0,69,5570	0/0:24,0:24:72.25:0,72,5540	0/0:29,0:28:84.29:0,84,6245	0/0:8,0:8:24.08:0,24,1141
chr10	30607248	.	C	CAAAAG	36872.48	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-14.625;DP=709;FS=4.889;HRun=0;HaplotypeScore=101.8835;InbreedingCoeff=0.9902;MQ=81.93;MQ0=0;MQRankSum=-10.116;QD=71.05;ReadPosRankSum=6.766;VQSLOD=5.8146;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,28:31:57.11:1635,57,0	1/1:0,11:11:33.07:970,33,0	0/0:21,0:21:60.16:0,60,1115	0/0:25,0:25:62.93:0,63,1120	1/1:1,24:31:65.95:1633,66,0	1/1:1,34:42:87.30:2719,87,0	1/1:0,17:20:36.12:1136,36,0	0/0:26,0:26:78.21:0,78,1407	1/1:1,25:28:57.20:1805,57,0	1/1:1,25:30:78.23:2237,78,0	1/1:0,22:26:69.11:1953,69,0	1/1:0,24:28:69.24:2163,69,0	1/1:0,20:22:51.18:1615,51,0	1/1:0,31:36:90.27:2769,90,0	1/1:1,27:33:72.25:2277,72,0	1/1:1,24:27:75.22:2270,75,0	0/0:27,0:27:75.23:0,75,1566	0/0:21,0:21:60.17:0,60,1215	0/0:21,0:21:60.18:0,60,1241	0/0:36,0:36:99:0,102,2050	0/0:13,0:13:36.12:0,36,765	1/1:0,21:23:66.14:1969,66,0	1/1:0,12:15:36:1044,36,0	1/1:4,20:26:57.67:1804,58,0	1/1:0,22:23:57.20:1758,57,0	1/1:1,28:34:96.30:2836,96,0	1/1:1,25:28:63.22:1994,63,0	1/1:0,3:5:9.03:285,9,0
chr10	30608184	.	AT	A	21440.75	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=19.173;DP=815;FS=2.345;HRun=1;HaplotypeScore=128.0967;InbreedingCoeff=0.9997;MQ=85.52;MQ0=0;MQRankSum=-2.501;QD=36.84;ReadPosRankSum=6.293;VQSLOD=4.2140;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,46:46:99:1635,126,0	1/1:0,10:10:24.08:312,24,0	0/0:23,0:23:69.14:0,69,988	0/0:26,1:27:77.29:0,77,1197	1/1:0,22:23:69.22:895,69,0	1/1:0,28:28:75.24:974,75,0	1/1:0,27:27:75.24:974,75,0	0/0:46,0:46:99:0,138,2178	1/1:0,33:33:90.29:1168,90,0	1/1:0,46:46:99:1752,135,0	1/1:0,19:19:57.13:720,57,0	1/1:0,21:21:63.20:818,63,0	1/1:0,31:31:84.27:1090,84,0	1/1:0,35:35:99:1285,99,0	1/1:3,44:47:99:1739,135,0	1/1:0,32:32:90.29:1168,90,0	0/0:30,0:30:90.31:0,90,1435	0/0:19,0:19:57.18:0,57,887	0/0:20,0:20:60.16:0,60,910	0/0:36,0:36:99:0,105,1651	0/0:32,0:32:96.31:0,96,1506	1/1:0,32:32:93.26:1187,93,0	1/1:0,24:24:72.23:935,72,0	1/1:0,17:17:51.17:662,51,0	1/1:1,19:20:60.19:769,60,0	1/1:0,38:38:99:1451,114,0	1/1:1,32:33:93.30:1207,93,0	1/1:0,20:20:54.18:701,54,0
chr10	30609829	.	T	TA	596.02	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-6.806;DP=499;FS=6.964;HRun=2;HaplotypeScore=44.6322;InbreedingCoeff=0.9967;MQ=87.65;MQ0=0;MQRankSum=-3.405;QD=37.25;ReadPosRankSum=1.711;VQSLOD=3.9223;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:39.11:0,39,472	0/0:9,0:9:27.08:0,27,335	0/0:22,0:22:66.19:0,66,793	0/0:13,0:13:36.08:0,36,424	0/0:24,0:24:63.17:0,63,756	0/0:27,0:27:81.20:0,81,955	0/0:15,0:15:42.13:0,42,520	0/0:35,0:35:96.28:0,96,1159	0/0:9,0:9:27.08:0,27,335	0/0:15,0:15:45.13:0,45,548	0/0:25,0:25:75.22:0,75,917	0/0:20,0:20:60.18:0,60,731	0/0:19,0:19:57.16:0,57,692	0/0:15,0:15:42.13:0,42,521	1/1:0,16:16:48.16:691,48,0	0/0:18,0:18:48.15:0,48,595	0/0:11,0:11:30.08:0,30,358	0/0:12,0:12:33.01:0,33,360	0/0:14,0:14:42.13:0,42,518	0/0:26,0:26:78.21:0,78,929	0/0:16,0:16:48.10:0,48,576	0/0:21,0:21:60.18:0,60,732	0/0:16,0:16:48.15:0,48,595	0/0:14,0:14:42.13:0,42,520	0/0:27,0:27:78.23:0,78,955	0/0:17,0:17:48.13:0,48,581	0/0:18,0:17:54.15:0,54,655	0/0:12,0:12:36.09:0,36,431
chr10	30611146	.	ACG	A	1807.46	PASS	AB=0.965;AC=30;AF=0.536;AN=56;BaseQRankSum=5.241;DP=526;FS=6.877;HRun=0;HaplotypeScore=151.4121;InbreedingCoeff=0.1118;MQ=63.55;MQ0=3;MQRankSum=3.240;QD=5.27;ReadPosRankSum=1.028;VQSLOD=2.8711;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:20:12.86:99,13,0	0/1:7,1:8:2.04:18,0,2	0/1:8,0:6:14.90:15,0,26	0/0:23,0:12:3:0,3,37	1/1:15,1:16:14.53:105,15,0	0/1:20,0:20:10.60:79,0,11	1/1:32,0:32:10.01:230,10,0	0/0:22,0:21:43.72:0,44,405	1/1:17,1:18:1.12:44,1,0	0/1:13,0:13:6.91:120,0,7	1/1:13,0:13:11.97:95,12,0	0/1:21,2:23:43.17:86,0,43	0/1:16,0:16:59.54:77,0,60	1/1:21,0:21:1.20:72,1,0	0/1:22,1:23:44.94:79,0,45	0/1:16,1:17:31.90:87,0,32	0/0:43,0:43:59.27:0,59,1137	0/0:32,0:32:53.86:0,54,1032	0/0:11,0:11:12.89:0,13,221	0/0:10,0:10:9.37:0,9,168	0/0:42,0:42:84.21:0,84,858	1/1:19,0:19:23.92:190,24,0	1/1:10,0:10:8.99:74,9,0	0/1:17,0:17:2.04:103,0,2	0/1:17,1:17:2.02:106,0,2	1/1:14,0:14:7.73:220,8,0	0/1:11,1:11:19.25:52,0,19	0/1:5,0:5:12.02:32,0,12
chr10	30611152	.	G	GCA	719.44	PASS	AB=0.905;AC=26;AF=0.464;AN=56;BaseQRankSum=7.053;DP=519;FS=10.920;HRun=0;HaplotypeScore=161.2443;InbreedingCoeff=0.0507;MQ=57.51;MQ0=5;MQRankSum=-0.288;QD=2.31;ReadPosRankSum=-0.226;VQSLOD=1.6138;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:18:5.37:35,5,0	1/1:6,0:7:5.93:51,6,0	0/0:6,0:4:6.74:0,7,56	0/0:18,0:7:7.54:0,8,93	0/1:12,3:15:3.92:4,0,17	1/1:11,7:18:3.08:157,3,0	0/1:29,4:33:7.74:74,0,8	0/0:21,0:20:47.99:0,48,621	0/1:15,3:18:3.25:61,0,3	0/1:10,0:11:0.07:49,0,0	1/1:8,1:11:1.67:23,2,0	0/1:21,3:23:36.08:36,0,43	0/1:12,2:14:37.33:37,0,52	1/1:20,1:21:3.14:99,3,0	0/1:23,0:23:24.92:25,0,57	0/1:14,2:16:22.01:37,0,22	0/0:44,0:44:99:0,108,1548	0/0:33,0:33:90.18:0,90,1272	0/0:13,0:12:33.03:0,33,407	0/0:12,0:12:21.07:0,21,304	0/0:40,0:40:99:0,99,1293	1/1:19,2:21:1.59:26,2,0	1/1:10,0:10:3.68:26,4,0	0/1:15,2:17:8.55:18,0,9	0/0:15,5:19:2.41:0,2,13	0/1:17,0:15:11.40:53,0,11	0/1:11,0:10:9.22:32,0,9	0/1:5,1:6:9.08:39,0,9
chr10	30611154	.	GCA	G	77.64	PASS	AB=0.900;AC=6;AF=0.115;AN=52;BaseQRankSum=0.399;DP=562;FS=3.249;HRun=0;HaplotypeScore=176.0065;InbreedingCoeff=-0.0157;MQ=54.45;MQ0=8;MQRankSum=2.939;QD=0.59;ReadPosRankSum=1.167;VQSLOD=2.6189;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:23:6.87:0,7,49	0/0:8,0:8:6:0,6,51	./.	./.	0/0:18,0:18:3.40:0,3,23	0/0:21,0:21:13.52:0,14,142	0/0:37,0:37:9.11:0,9,94	0/0:22,0:20:26.92:0,27,239	0/0:19,0:19:11.98:0,12,114	0/0:14,0:14:20.91:0,21,181	0/0:13,0:13:2.99:0,3,24	0/0:28,0:27:9.01:0,9,116	0/0:17,0:16:4.50:0,5,195	0/0:24,0:23:14.97:0,15,123	0/0:22,0:22:6.01:0,6,66	0/0:18,0:18:13.06:0,13,132	0/1:33,9:43:81.07:81,0,805	0/0:28,0:31:3.79:0,4,675	0/1:10,0:9:59.15:65,0,59	0/1:9,3:12:22.18:22,0,84	0/1:42,0:42:1.36:1,0,477	1/1:24,0:24:2.60:13,3,0	0/0:15,0:14:5.99:0,6,49	0/0:20,0:20:3.01:0,3,45	0/0:20,0:19:3.01:0,3,45	0/0:20,0:18:26.66:0,27,208	0/0:13,0:12:13.71:0,14,132	0/0:4,0:4:6.42:0,6,63
chr10	30612000	.	AGAT	A	7809.76	PASS	AB=0.953;AC=36;AF=0.667;AN=54;BaseQRankSum=-0.676;DP=655;FS=21.722;HRun=0;HaplotypeScore=150.5366;InbreedingCoeff=0.4267;MQ=43.32;MQ0=23;MQRankSum=4.851;QD=17.05;ReadPosRankSum=5.630;VQSLOD=3.1393;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:23:8.42:111,8,0	0/1:6,1:7:5.10:31,0,5	./.	0/0:2,0:1:3.01:0,3,42	0/1:23,3:26:41.57:466,0,42	0/1:39,0:33:21.96:516,0,22	1/1:12,0:9:5.75:91,6,0	0/0:66,0:46:99:0,120,1576	1/1:17,0:16:24.04:342,24,0	0/1:26,0:25:99:645,0,203	1/1:21,0:20:23.97:345,24,0	1/1:30,0:30:36.96:509,37,0	1/1:22,0:22:35.92:546,36,0	1/1:12,0:9:15.05:228,15,0	1/1:20,0:20:21.44:322,21,0	1/1:16,1:16:39.13:584,39,0	0/0:46,0:45:55.72:0,56,1424	0/1:33,0:29:21.55:22,0,693	0/0:17,0:13:36.12:0,36,640	0/0:56,0:56:99:0,146,2227	0/0:9,0:7:12.04:0,12,168	1/1:15,0:14:8.76:104,9,0	1/1:16,1:16:24.08:366,24,0	1/1:10,2:10:17.99:228,18,0	1/1:27,0:26:5.44:451,5,0	0/1:35,2:34:99:831,0,139	1/1:23,7:27:18.23:743,18,0	1/1:13,0:10:21.07:330,21,0
chr10	30612002	.	AT	A	642.27	PASS	AB=0.954;AC=34;AF=0.630;AN=54;BaseQRankSum=10.113;DP=659;FS=3.366;HRun=1;HaplotypeScore=160.1155;InbreedingCoeff=-0.0031;MQ=42.72;MQ0=26;MQRankSum=3.870;QD=1.14;ReadPosRankSum=1.922;VQSLOD=-0.7399;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:20,5:23:3.28:9,3,0	1/1:3,4:7:5.50:159,5,0	./.	0/0:2,0:1:3.01:0,3,48	0/1:25,0:25:22.01:22,0,89	0/1:33,6:33:23.60:24,0,73	1/1:12,0:9:2.84:9,3,0	0/0:66,0:44:99:0,132,2007	1/1:16,0:15:0.31:13,0,0	0/1:27,0:26:6.14:6,0,294	1/1:19,1:19:12.56:34,13,0	1/1:30,0:30:2.25:25,2,0	1/1:22,0:21:16.71:45,17,0	1/1:11,1:9:7.11:20,7,0	1/1:18,1:19:10.94:32,11,0	1/1:17,0:16:11.42:41,11,0	0/1:40,7:46:31.85:32,0,1258	0/1:29,4:29:58.42:58,0,774	0/0:17,0:13:36.12:0,36,571	0/1:54,4:57:8.02:8,0,2144	0/0:6,3:7:12.04:0,12,190	0/1:14,0:13:3.38:3,0,4	0/1:18,0:17:2.79:3,0,33	0/1:12,0:10:0.51:12,0,1	0/1:28,3:29:29.47:135,0,29	0/1:35,1:33:70.84:71,0,211	0/1:30,0:27:20.38:20,0,47	1/1:14,0:11:1.44:17,1,0
chr10	30612003	.	T	TA	8071.29	PASS	AB=0.745;AC=36;AF=0.667;AN=54;BaseQRankSum=-1.064;DP=673;FS=18.729;HRun=1;HaplotypeScore=136.5159;InbreedingCoeff=0.4311;MQ=42.23;MQ0=29;MQRankSum=4.962;QD=17.03;ReadPosRankSum=4.641;VQSLOD=3.8741;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,11:23:8.52:114,9,0	0/1:6,1:7:5.24:39,0,5	./.	0/0:2,0:1:3.01:0,3,42	0/1:14,12:26:28.69:460,0,29	0/1:24,18:35:25.01:565,0,25	1/1:3,7:7:5.75:94,6,0	0/0:63,0:41:99:0,123,1594	1/1:6,12:16:24.55:378,25,0	0/1:13,15:27:99:636,0,176	1/1:10,10:19:23.97:355,24,0	1/1:13,17:29:37.68:571,38,0	1/1:9,15:22:35.76:558,36,0	1/1:6,6:9:15.05:234,15,0	1/1:4,17:20:21.44:331,21,0	1/1:6,11:16:39.13:586,39,0	0/0:43,3:46:32.28:0,32,1120	0/1:27,3:28:20.51:21,0,629	0/0:16,1:13:36.12:0,36,493	0/0:59,0:58:99:0,153,2018	0/0:10,0:8:12.04:0,12,168	1/1:8,8:15:9.03:143,9,0	1/1:8,10:17:24.08:340,24,0	1/1:6,6:11:18.05:256,18,0	1/1:15,15:28:7.11:447,7,0	0/1:16,20:33:99:849,0,109	1/1:15,18:29:19.32:786,19,0	1/1:9,7:13:21.07:309,21,0
chr10	30612024	.	GAT	G	482.38	PASS	AB=0.973;AC=11;AF=0.212;AN=52;BaseQRankSum=5.070;DP=800;FS=20.679;HRun=0;HaplotypeScore=198.8764;InbreedingCoeff=0.5844;MQ=35.02;MQ0=70;MQRankSum=4.035;QD=2.58;ReadPosRankSum=-1.755;VQSLOD=0.9695;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:30:16.29:0,16,269	0/0:13,0:12:14.75:0,15,269	./.	./.	0/0:31,0:29:36.10:0,36,499	0/1:42,1:32:0.40:156,0,0	0/0:14,0:7:0:0,0,0	0/0:60,0:38:99:0,108,1482	0/0:21,0:18:14.37:0,14,93	0/0:33,0:31:49.44:0,49,840	0/0:24,0:23:12.01:0,12,153	0/1:30,2:30:19.98:59,0,20	1/1:23,3:24:14.43:127,14,0	1/1:20,1:15:5.99:49,6,0	0/0:24,0:20:8.93:0,9,64	0/0:20,0:17:9.88:0,10,104	0/0:48,1:46:94.59:0,95,1595	0/0:37,0:25:48.29:0,48,891	0/0:23,0:14:39.09:0,39,662	0/0:57,0:55:99:0,135,2300	0/0:18,0:14:15.05:0,15,239	1/1:16,1:16:2.68:11,3,0	0/1:33,0:30:23.07:135,0,23	1/1:15,0:10:11.93:94,12,0	0/0:37,0:31:21.95:0,22,324	0/0:45,0:37:90.51:0,91,1112	0/0:47,0:39:48.49:0,48,588	0/0:24,0:20:27.09:0,27,399
chr10	30612028	.	GAT	G	663.84	PASS	AB=0.983;AC=17;AF=0.327;AN=52;BaseQRankSum=5.634;DP=788;FS=26.203;HRun=0;HaplotypeScore=196.0055;InbreedingCoeff=0.4165;MQ=34.27;MQ0=72;MQRankSum=2.991;QD=2.22;ReadPosRankSum=-2.737;VQSLOD=0.9765;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:35,1:30:6.06:6,0,284	0/0:14,0:12:14.73:0,15,253	./.	./.	0/0:29,0:27:27.78:0,28,301	0/1:42,0:32:0.37:164,0,0	0/0:14,0:7:0:0,0,0	0/0:55,0:36:99:0,108,1532	1/1:17,2:16:10.81:96,11,0	0/1:31,2:31:99:122,0,681	1/1:22,2:23:0.60:21,1,0	0/1:32,0:30:18.06:63,0,18	1/1:25,0:23:11.85:105,12,0	1/1:20,0:14:3:27,3,0	0/0:25,0:21:5.99:0,6,58	0/0:18,0:15:8.34:0,8,53	0/0:50,0:47:94.50:0,94,1570	0/0:36,1:25:49.60:0,50,909	0/0:19,0:12:36.12:0,36,641	0/0:58,0:55:99:0,135,2290	0/0:16,0:12:15.05:0,15,239	1/1:21,0:20:2.68:11,3,0	0/1:31,0:28:27.84:106,0,28	1/1:16,0:11:11.96:102,12,0	0/0:34,2:30:1.03:0,1,246	0/0:46,0:38:88.33:0,88,1115	0/0:47,0:39:24.65:0,25,388	0/0:24,0:20:27.04:0,27,349
chr10	30612032	.	GAT	G	730.71	PASS	AB=0.991;AC=25;AF=0.481;AN=52;BaseQRankSum=6.608;DP=790;FS=9.039;HRun=0;HaplotypeScore=193.8881;InbreedingCoeff=0.2052;MQ=33.35;MQ0=72;MQRankSum=4.969;QD=1.60;ReadPosRankSum=-3.916;VQSLOD=1.0019;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:37,0:30:5.73:6,0,286	0/1:16,0:13:3.76:4,0,215	./.	./.	0/1:25,1:24:60.97:61,0,86	0/1:40,0:29:10.32:75,0,10	0/0:14,0:7:0:0,0,0	0/0:58,0:41:99:0,120,1620	1/1:20,0:17:10.98:100,11,0	0/1:33,0:31:99:104,0,646	1/1:23,0:22:3:26,3,0	0/1:29,0:27:17.19:52,0,17	1/1:26,0:24:8.44:75,8,0	1/1:22,0:16:2.98:22,3,0	1/1:22,2:20:2.99:23,3,0	1/1:19,1:17:5.20:62,5,0	0/0:48,1:46:93.72:0,94,1534	0/0:36,0:24:38.11:0,38,899	0/0:21,0:14:42.10:0,42,690	0/0:56,0:53:99:0,126,2189	0/0:15,0:11:15.05:0,15,244	1/1:23,0:22:2.84:14,3,0	0/1:33,0:30:30.92:51,0,31	1/1:16,0:11:11.94:94,12,0	0/0:36,0:30:9.47:0,9,249	0/0:47,0:39:41.15:0,41,938	0/1:44,2:38:99:126,0,113	0/1:22,0:18:0.79:1,0,253
chr10	30612036	.	GATAGAT	G	1655.44	PASS	AB=0.948;AC=23;AF=0.442;AN=52;BaseQRankSum=7.499;DP=791;FS=0.000;HRun=0;HaplotypeScore=208.2969;InbreedingCoeff=0.0654;MQ=32.59;MQ0=80;MQRankSum=-1.366;QD=3.61;ReadPosRankSum=-3.980;VQSLOD=1.7280;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:38,0:31:26.83:27,0,296	0/1:16,1:13:55.26:55,0,350	./.	./.	0/1:21,3:22:75.83:95,0,76	0/1:39,0:29:26.32:99,0,26	0/0:14,0:7:0:0,0,0	0/0:55,0:38:99:0,99,1533	1/1:19,0:16:11.53:157,12,0	0/1:26,0:26:99:324,0,557	1/1:22,0:22:3.01:44,3,0	0/1:30,0:30:18.41:18,0,34	1/1:25,0:25:0.53:38,1,0	1/1:22,0:17:3:29,3,0	1/1:23,0:18:2.98:21,3,0	1/1:19,1:17:9:127,9,0	0/0:50,0:47:99:0,100,2509	0/0:38,0:25:22.52:0,23,1363	0/0:21,0:14:42.14:0,42,1060	0/0:56,0:53:99:0,132,3441	0/0:16,0:12:18.06:0,18,385	0/0:22,0:21:2.22:0,2,7	0/0:35,0:30:3.79:0,4,44	1/1:14,0:9:2.98:21,3,0	0/1:36,0:31:24.74:25,0,320	0/1:47,2:38:99:333,0,724	0/1:41,4:37:80.09:400,0,80	0/0:23,0:18:15.65:0,16,301
chr10	30612040	.	GAT	G	778.81	PASS	AB=0.863;AC=16;AF=0.320;AN=50;BaseQRankSum=7.433;DP=772;FS=0.000;HRun=0;HaplotypeScore=177.4154;InbreedingCoeff=0.0654;MQ=31.87;MQ0=84;MQRankSum=-3.657;QD=2.28;ReadPosRankSum=-3.122;VQSLOD=1.3874;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:36,2:30:8.57:9,0,268	0/1:12,4:12:11.48:11,0,216	./.	./.	0/1:19,3:20:21.26:21,0,90	0/1:35,5:29:50.06:50,0,80	0/0:11,1:5:0:0,0,0	0/0:49,0:33:99:0,99,1404	0/1:14,4:15:1.40:31,0,1	0/1:22,6:25:99:221,0,422	1/1:15,8:22:3:28,3,0	0/0:23,8:29:1.42:0,1,95	1/1:19,7:24:1.18:16,1,0	1/1:17,6:17:2.88:15,3,0	./.	1/1:11,7:15:3.01:40,3,0	0/0:49,0:46:93.20:0,93,1592	0/0:40,0:26:54.19:0,54,941	0/0:22,0:15:45.15:0,45,766	0/0:54,1:52:99:0,129,2173	0/0:15,1:12:18.06:0,18,287	0/0:13,9:21:3.01:0,3,36	0/0:20,15:30:6.64:0,7,54	0/0:12,1:8:3:0,3,28	0/0:30,7:31:12:0,12,274	0/1:41,6:35:99:321,0,616	0/1:35,7:34:65.93:155,0,66	0/0:20,5:18:15.99:0,16,210
chr10	30612044	.	GAT	G	692.75	PASS	AB=0.969;AC=11;AF=0.229;AN=48;BaseQRankSum=6.239;DP=790;FS=0.000;HRun=0;HaplotypeScore=177.6254;InbreedingCoeff=-0.0115;MQ=31.32;MQ0=88;MQRankSum=-4.529;QD=2.58;ReadPosRankSum=-1.937;VQSLOD=1.7700;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:30:8.59:0,9,309	0/1:16,0:12:7.50:7,0,216	./.	./.	0/1:21,2:21:5.50:6,0,52	0/1:39,0:28:11.22:11,0,127	0/0:14,0:7:1.25:0,1,3	0/0:48,0:32:96.17:0,96,1327	0/0:19,0:16:0.33:0,0,26	0/1:29,1:27:99:214,0,425	1/1:24,0:23:2.84:14,3,0	0/0:29,1:28:9.50:0,10,143	0/0:31,0:27:5.27:0,5,31	./.	./.	1/1:19,0:16:3.01:40,3,0	0/0:49,0:46:92.59:0,93,1527	0/0:40,0:26:51.79:0,52,893	0/0:23,0:16:48.16:0,48,811	0/0:53,0:50:99:0,120,2105	0/0:16,0:12:18.02:0,18,264	0/0:24,1:24:3.01:0,3,57	0/0:36,1:31:8.92:0,9,104	0/0:15,0:9:3.01:0,3,54	0/0:37,0:31:20.69:0,21,272	0/1:46,2:35:99:376,0,395	0/1:41,3:36:73.72:139,0,74	0/1:26,0:19:13.72:14,0,146
chr10	30612050	.	TAG	T	495.98	PASS	AB=0.918;AC=15;AF=0.326;AN=46;BaseQRankSum=8.405;DP=795;FS=1.382;HRun=0;HaplotypeScore=168.9750;InbreedingCoeff=0.2366;MQ=30.57;MQ0=92;MQRankSum=-4.901;QD=1.66;ReadPosRankSum=0.078;VQSLOD=2.7069;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,3:29:19.40:0,19,268	0/0:16,0:12:11.28:0,11,218	./.	./.	1/1:18,5:21:6.02:85,6,0	0/1:39,0:28:1.31:24,0,1	0/0:16,0:8:1.25:0,1,3	0/0:47,0:31:90.24:0,90,1294	1/1:15,1:13:0.64:2,1,0	0/1:34,1:32:48.74:49,0,381	./.	1/1:28,0:26:2.13:4,2,0	0/0:29,0:25:2.28:0,2,7	./.	./.	0/1:18,4:19:9.26:9,0,30	0/0:51,0:48:35.49:0,35,1271	0/0:36,1:24:46.03:0,46,755	0/0:25,0:18:45.15:0,45,724	0/0:52,0:49:99:0,120,1954	0/0:15,0:11:15.05:0,15,247	1/1:25,0:24:0.89:2,1,0	0/0:36,0:29:2.90:0,3,44	1/1:15,0:9:0.89:2,1,0	0/0:37,0:32:4.77:0,5,144	0/1:43,9:38:99:399,0,200	0/1:40,4:35:31.65:41,0,32	0/0:19,4:16:10.27:0,10,107
chr10	30612058	.	GAT	G	758.39	PASS	AB=0.866;AC=9;AF=0.196;AN=46;BaseQRankSum=7.169;DP=812;FS=5.247;HRun=0;HaplotypeScore=160.0866;InbreedingCoeff=0.2969;MQ=29.73;MQ0=94;MQRankSum=-6.502;QD=3.02;ReadPosRankSum=4.876;VQSLOD=2.1558;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:31:19.13:0,19,437	0/0:15,0:11:12.51:0,13,232	./.	./.	1/1:19,6:22:5.66:83,6,0	1/1:27,10:26:6.36:75,6,0	0/0:16,2:10:2.99:0,3,24	0/0:51,0:36:99:0,105,1909	0/0:13,2:12:1.25:0,1,4	0/1:35,2:34:99:174,0,583	./.	0/1:22,7:26:0:0,0,0	0/0:26,6:28:4.75:0,5,15	0/0:24,2:17:0:0,0,1	./.	0/0:19,5:19:5.23:0,5,53	0/0:48,0:45:86.34:0,86,1461	0/0:39,0:24:58.59:0,59,946	0/0:23,0:15:42.14:0,42,809	0/0:51,0:48:99:0,114,2113	0/0:16,0:12:18.06:0,18,347	0/1:20,4:22:0:0,0,0	0/0:27,8:27:2.90:0,3,58	./.	0/0:35,2:31:18.06:0,18,322	0/1:46,8:41:99:496,0,405	0/1:37,8:36:46.44:46,0,53	0/0:17,5:16:9.50:0,10,158
chr10	30612062	.	GAT	G	588.80	PASS	AB=0.970;AC=8;AF=0.174;AN=46;BaseQRankSum=5.931;DP=814;FS=4.567;HRun=0;HaplotypeScore=165.0425;InbreedingCoeff=0.1557;MQ=29.67;MQ0=92;MQRankSum=-4.187;QD=2.32;ReadPosRankSum=3.914;VQSLOD=2.2662;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,1:31:19.17:0,19,450	0/0:15,0:11:12.51:0,13,231	./.	./.	1/1:26,1:23:5.29:85,5,0	0/1:38,0:28:20.83:31,0,21	0/0:18,0:10:2.96:0,3,19	0/0:48,0:36:99:0,108,1947	0/0:13,3:13:5.57:0,6,32	0/1:30,6:33:99:184,0,460	./.	0/1:30,0:27:0:0,0,0	0/0:34,0:30:6.57:0,7,21	0/0:25,1:17:0:0,0,1	./.	0/0:23,1:19:4.72:0,5,17	0/0:46,0:43:83.31:0,83,1416	0/0:39,0:24:58.43:0,58,1004	0/0:23,0:15:42.14:0,42,808	0/0:48,0:45:99:0,102,1961	0/0:17,0:13:21.04:0,21,368	0/1:26,0:23:0:0,0,0	0/0:35,0:27:2.90:0,3,58	./.	0/0:30,8:32:18.06:0,18,340	0/1:52,2:41:99:364,0,390	0/1:43,0:34:35.85:36,0,60	0/0:23,0:17:12.18:0,12,169
chr10	30612068	.	TAG	T	1807.73	PASS	AB=0.661;AC=12;AF=0.250;AN=48;BaseQRankSum=7.558;DP=821;FS=2.620;HRun=0;HaplotypeScore=155.4516;InbreedingCoeff=0.1626;MQ=30.03;MQ0=89;MQRankSum=-6.490;QD=5.60;ReadPosRankSum=0.429;VQSLOD=3.4782;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,2:28:19.39:0,19,258	0/0:11,3:10:12.47:0,12,109	./.	./.	0/0:13,14:23:5.17:0,5,20	1/1:24,15:29:8.78:91,9,0	0/0:16,1:10:2.99:0,3,25	0/0:53,0:40:99:0,108,1454	0/1:9,9:15:6.06:73,0,6	0/1:11,24:33:92.35:791,0,92	0/0:12,23:31:0:0,0,0	0/1:13,18:28:4.85:17,0,5	0/1:12,22:30:7.08:33,0,7	0/0:10,16:17:0:0,0,1	./.	1/1:8,15:18:2.62:42,3,0	0/0:44,1:42:46.08:0,46,549	0/0:39,0:24:62.24:0,62,789	0/0:22,0:15:42.12:0,42,628	0/0:48,0:45:99:0,110,1627	0/0:19,0:14:24.08:0,24,382	0/1:13,13:23:0.17:0,0,0	0/0:11,24:27:2.89:0,3,26	./.	0/0:27,16:37:15.03:0,15,177	0/1:31,21:39:99:686,0,130	0/1:25,17:33:6.69:175,0,7	0/1:13,10:17:29.30:29,0,84
chr10	30612070	.	G	GAT	1904.83	PASS	AB=0.972;AC=14;AF=0.280;AN=50;BaseQRankSum=7.638;DP=845;FS=2.524;HRun=0;HaplotypeScore=174.6422;InbreedingCoeff=0.1981;MQ=30.50;MQ0=89;MQRankSum=-7.445;QD=4.77;ReadPosRankSum=0.384;VQSLOD=3.3117;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,1:28:21.68:0,22,269	0/0:13,1:10:11.89:0,12,108	./.	./.	0/0:26,1:23:5.14:0,5,20	1/1:39,1:30:11.84:108,12,0	0/0:22,0:15:2.27:0,2,14	0/0:52,0:38:99:0,108,1454	0/1:20,0:17:5.27:73,0,5	0/1:35,1:34:88.37:822,0,88	0/1:35,1:32:0:0,0,0	0/1:33,2:32:4.71:17,0,5	0/1:34,0:30:2.22:37,0,2	0/1:27,0:18:0:0,0,1	0/0:24,0:19:2.22:0,2,7	1/1:23,0:18:2.23:10,2,0	0/0:43,0:41:65.28:0,65,862	0/0:39,0:24:62.24:0,62,764	0/0:23,0:16:45.12:0,45,618	0/0:49,0:46:99:0,110,1543	0/0:20,0:15:27.01:0,27,389	0/1:23,4:24:0.17:0,0,0	0/0:34,2:28:2.89:0,3,26	./.	0/0:34,12:40:15.03:0,15,177	0/1:54,1:42:99:745,0,117	0/1:42,1:34:6.32:195,0,6	0/1:23,0:17:29.30:29,0,84
chr10	30612072	.	GAT	G	806.38	PASS	AB=0.970;AC=12;AF=0.240;AN=50;BaseQRankSum=7.403;DP=858;FS=3.261;HRun=0;HaplotypeScore=177.1018;InbreedingCoeff=0.0533;MQ=30.86;MQ0=93;MQRankSum=-5.103;QD=2.69;ReadPosRankSum=2.621;VQSLOD=2.6243;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:27:18.90:0,19,236	0/0:14,0:10:12.51:0,13,165	./.	./.	0/0:28,0:24:8.83:0,9,82	0/1:37,4:31:10.54:89,0,11	0/0:25,0:18:4.41:0,4,28	0/0:56,0:38:98.68:0,99,1235	0/1:20,1:18:12.47:33,0,12	0/1:35,0:33:99:370,0,182	0/0:36,0:32:2.99:0,3,24	0/0:38,0:35:0.39:0,0,29	1/1:34,0:30:1.10:30,1,0	0/0:28,0:19:5.49:0,5,25	1/1:21,2:18:2.22:7,2,0	1/1:23,0:18:2.61:25,3,0	0/0:44,0:41:22:0,22,467	0/0:39,0:24:63.23:0,63,893	0/0:23,0:16:45.10:0,45,667	0/0:47,0:44:99:0,111,1721	0/0:22,0:17:33.08:0,33,492	0/0:27,0:24:2.74:0,3,13	0/0:36,0:28:2.90:0,3,41	./.	0/0:47,0:41:17.79:0,18,215	0/1:56,0:43:99:295,0,321	0/1:42,2:35:36.64:79,0,37	0/1:23,0:17:11.35:11,0,111
chr10	30612076	.	GAT	G	64.78	PASS	AB=0.997;AC=9;AF=0.180;AN=50;BaseQRankSum=3.476;DP=874;FS=0.000;HRun=0;HaplotypeScore=192.2431;InbreedingCoeff=0.1710;MQ=31.41;MQ0=95;MQRankSum=-0.638;QD=0.26;ReadPosRankSum=1.292;VQSLOD=2.3039;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:28:18.90:0,19,235	0/0:15,0:11:15.52:0,16,201	./.	./.	0/0:29,0:25:9.31:0,9,102	0/1:40,0:30:54.05:54,0,60	0/1:26,0:19:0.90:14,0,1	0/0:56,0:35:99:0,101,1181	0/1:21,0:18:15.26:33,0,15	0/0:39,0:37:93.48:0,93,668	0/0:36,0:32:3.01:0,3,55	0/0:39,0:36:3.45:0,3,51	1/1:34,1:31:1.98:63,2,0	0/0:28,0:19:5.59:0,6,27	1/1:25,0:20:2.22:7,2,0	0/0:24,0:19:5.60:0,6,29	0/0:41,0:38:31.23:0,31,432	0/0:41,0:26:62.40:0,62,937	0/0:21,0:14:39.12:0,39,628	0/0:47,0:44:99:0,111,1788	0/0:23,0:18:39.12:0,39,642	0/0:26,2:25:2.44:0,2,12	0/0:39,0:30:2.36:0,2,39	./.	0/0:47,0:41:17.74:0,18,197	0/1:57,1:45:1.68:2,0,643	0/1:45,0:36:5.35:5,0,96	0/0:22,0:17:12.10:0,12,139
chr10	30612080	.	GAT	G	60.94	PASS	AB=0.992;AC=11;AF=0.220;AN=50;BaseQRankSum=2.163;DP=895;FS=4.739;HRun=0;HaplotypeScore=200.9479;InbreedingCoeff=0.1259;MQ=32.14;MQ0=95;MQRankSum=1.336;QD=0.21;ReadPosRankSum=-1.187;VQSLOD=2.4531;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,3:30:19.09:0,19,307	0/0:16,0:12:15.43:0,15,197	./.	./.	0/1:30,0:26:12.50:13,0,114	0/1:42,0:32:7.06:7,0,125	0/1:27,1:21:1.43:14,0,1	0/0:58,0:33:93.20:0,93,1203	1/1:23,0:20:2.47:41,2,0	0/0:40,1:39:85.23:0,85,775	0/0:35,1:32:3:0,3,26	0/0:39,0:36:14.66:0,15,142	0/1:37,0:33:5.29:57,0,5	0/0:29,0:20:8.97:0,9,70	1/1:25,0:20:2.22:7,2,0	0/1:25,0:20:16.31:16,0,20	0/0:38,0:36:25.31:0,25,374	0/0:41,0:26:62.39:0,62,932	0/0:22,0:14:39.13:0,39,647	0/0:49,0:46:99:0,114,1847	0/0:22,0:18:39.13:0,39,661	0/1:30,0:26:16.37:19,0,16	0/0:39,0:30:2.77:0,3,42	./.	0/0:47,0:41:14.98:0,15,170	0/0:58,1:46:28.16:0,28,761	0/1:45,1:37:17.35:17,0,142	0/0:22,0:17:10.58:0,11,108
chr10	30612251	.	A	ACT	25942.22	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-16.384;DP=835;FS=13.361;HRun=0;HaplotypeScore=82.0005;InbreedingCoeff=0.9998;MQ=83.17;MQ0=7;MQRankSum=-5.044;QD=43.17;ReadPosRankSum=6.777;VQSLOD=5.7283;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,44:45:99:2134,114,0	1/1:3,11:13:27.09:505,27,0	0/0:25,0:25:60.61:0,61,804	0/0:29,0:29:84.21:0,84,1150	1/1:2,25:27:66.22:1210,66,0	1/1:1,27:27:57.20:1067,57,0	1/1:1,23:24:60.21:1124,60,0	0/0:33,0:33:87.28:0,87,1247	1/1:1,28:29:75.26:1403,75,0	1/1:2,23:24:60.17:1053,60,0	1/1:1,20:21:45.15:842,45,0	1/1:1,39:38:90.31:1684,90,0	1/1:0,30:33:72.25:1335,72,0	1/1:2,30:32:75.26:1404,75,0	1/1:2,31:33:75.26:1403,75,0	1/1:0,31:30:78.27:1460,78,0	0/0:21,0:21:63.21:0,63,927	0/0:21,0:21:57.15:0,57,797	0/0:24,0:24:66.20:0,66,921	0/0:25,0:25:72.24:0,72,1058	0/0:56,0:56:99:0,169,2413	1/1:2,31:34:69.24:1290,69,0	1/1:0,18:18:48.16:898,48,0	1/1:1,26:29:63.22:1179,63,0	1/1:4,41:45:99:1947,105,0	1/1:0,32:33:96.30:1706,96,0	1/1:1,40:42:90.31:1682,90,0	1/1:0,14:14:33.11:618,33,0
chr10	30613583	.	T	TTG	1993.20	PASS	AB=1.000;AC=43;AF=0.860;AN=50;BaseQRankSum=6.557;DP=514;FS=0.945;HRun=0;HaplotypeScore=111.7724;InbreedingCoeff=0.3700;MQ=60.42;MQ0=21;MQRankSum=-0.313;QD=4.57;ReadPosRankSum=1.141;VQSLOD=2.9182;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:38,0:36:26.95:219,27,0	1/1:2,0:5:3:26,3,0	1/1:19,0:11:2.04:6,2,0	./.	./.	1/1:27,0:26:14.98:123,15,0	1/1:17,0:16:8.93:67,9,0	0/1:32,0:29:3.91:4,0,164	1/1:13,5:18:5.68:77,6,0	1/1:19,0:19:20.96:178,21,0	1/1:16,0:14:5.99:50,6,0	1/1:17,0:17:20.95:169,21,0	1/1:22,0:21:17.78:124,18,0	1/1:17,0:17:20.91:165,21,0	1/1:24,0:24:23.93:194,24,0	1/1:16,0:19:1.05:2,1,0	0/1:30,0:29:30.68:31,0,198	./.	0/0:26,0:22:8.08:0,8,93	0/1:14,0:12:8:8,0,61	0/0:18,0:17:11.80:0,12,94	1/1:16,0:15:8.93:66,9,0	1/1:8,0:8:8.93:67,9,0	1/1:15,0:14:20.93:180,21,0	1/1:21,0:20:5.94:44,6,0	1/1:23,0:22:26.87:211,27,0	1/1:14,0:11:11.96:95,12,0	1/1:5,0:5:2.98:22,3,0
chr10	30613598	.	T	TGTGTGT	4486.12	PASS	AB=1.000;AC=39;AF=0.780;AN=50;BaseQRankSum=4.668;DP=484;FS=0.950;HRun=0;HaplotypeScore=114.9983;InbreedingCoeff=0.5967;MQ=45.60;MQ0=30;MQRankSum=0.622;QD=12.39;ReadPosRankSum=0.490;VQSLOD=4.0627;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:35,0:33:27.07:605,27,0	1/1:6,0:6:3.90:98,4,0	0/0:9,0:2:3.01:0,3,36	./.	./.	1/1:24,0:22:15.72:368,16,0	1/1:17,0:15:10.73:131,11,0	0/0:32,0:29:19.79:0,20,366	1/1:15,0:15:3.48:92,3,0	1/1:22,0:20:18.51:322,19,0	1/1:17,0:15:6.02:150,6,0	1/1:18,0:18:18.04:339,18,0	1/1:21,0:19:11.87:249,12,0	1/1:16,0:16:21.07:428,21,0	1/1:22,0:21:23.79:178,24,0	1/1:21,0:21:0.47:2,0,0	0/1:32,0:31:25.54:26,0,512	./.	0/0:21,0:16:6.93:0,7,190	0/0:12,0:10:11.99:0,12,202	0/0:20,0:19:14.21:0,14,211	1/1:19,0:17:9.03:187,9,0	1/1:10,0:10:8.95:116,9,0	1/1:15,0:14:21.04:408,21,0	1/1:9,5:13:3.01:56,3,0	1/1:19,0:18:21.07:486,21,0	1/1:13,0:10:12.03:204,12,0	1/1:5,0:4:3.01:44,3,0
chr10	30617434	.	A	AGGTTG	38380.19	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-12.250;DP=708;FS=7.497;HRun=0;HaplotypeScore=107.6263;InbreedingCoeff=0.9960;MQ=81.68;MQ0=0;MQRankSum=-8.449;QD=76.00;ReadPosRankSum=3.397;VQSLOD=6.3870;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,28:35:90.31:2618,90,0	1/1:1,5:6:18.06:552,18,0	0/0:23,0:23:45.57:0,46,777	0/0:24,0:24:50.93:0,51,919	1/1:3,21:26:66.23:1916,66,0	1/1:7,23:31:81.28:2346,81,0	1/1:7,15:23:63.21:1705,63,0	0/0:24,0:24:66.23:0,66,1361	1/1:4,21:27:63.22:1915,63,0	1/1:7,25:33:99:2847,99,0	1/1:6,17:23:51.18:1464,51,0	1/1:3,26:29:84.29:2472,84,0	1/1:7,15:23:60.21:1758,60,0	1/1:4,15:22:54.18:1575,54,0	1/1:4,30:33:93.32:2817,93,0	1/1:3,24:27:78.27:2377,78,0	0/0:20,0:20:60.18:0,60,1191	0/0:19,0:19:54.17:0,54,1068	0/0:26,0:26:60.17:0,60,1187	0/0:38,0:38:99:0,105,2164	0/0:29,0:29:81.28:0,81,1660	1/1:4,17:21:60.20:1714,60,0	1/1:2,14:17:48.16:1415,48,0	1/1:7,16:24:48.16:1421,48,0	1/1:7,19:29:66.23:1876,66,0	1/1:6,23:32:87.30:2509,87,0	1/1:5,27:36:87.30:2623,87,0	1/1:2,5:7:15.05:461,15,0
chr10	30619557	.	T	TA	9926.81	PASS	AB=0.619;AC=39;AF=0.696;AN=56;BaseQRankSum=10.941;DP=601;FS=7.669;HRun=0;HaplotypeScore=100.3440;InbreedingCoeff=0.9290;MQ=80.71;MQ0=0;MQRankSum=-1.846;QD=23.41;ReadPosRankSum=6.586;VQSLOD=6.0149;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:10,10:20:24.48:325,24,0	1/1:1,8:9:18.71:199,19,0	0/0:13,0:13:33.05:0,33,393	0/0:22,0:21:55.51:0,56,631	1/1:5,33:39:41.07:803,41,0	1/1:1,26:28:65.69:794,66,0	1/1:6,14:20:27.59:443,28,0	0/0:38,0:38:99:0,111,1474	1/1:1,10:11:28.90:317,29,0	1/1:3,28:31:76.42:790,76,0	1/1:8,15:23:37.14:486,37,0	1/1:3,11:14:18.42:317,18,0	1/1:2,20:22:49.19:625,49,0	1/1:1,9:10:29.98:297,30,0	1/1:2,14:16:33.12:370,33,0	1/1:2,27:29:56.52:680,57,0	0/0:21,0:21:63.21:0,63,880	0/0:17,0:17:51.14:0,51,693	0/0:21,0:21:63.12:0,63,841	0/0:31,0:31:93.30:0,93,1285	0/0:14,0:14:39.12:0,39,528	1/1:2,15:17:31.09:342,31,0	1/1:7,22:29:64.45:717,64,0	0/1:5,8:13:5.86:181,0,6	1/1:3,24:27:34.15:610,34,0	1/1:2,20:22:40.71:521,41,0	1/1:4,29:33:83.88:856,84,0	1/1:2,8:10:23.96:255,24,0
chr10	30620091	.	A	AT	17418.85	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-12.081;DP=687;FS=0.662;HRun=4;HaplotypeScore=65.0403;InbreedingCoeff=0.9998;MQ=83.93;MQ0=0;MQRankSum=-6.000;QD=35.69;ReadPosRankSum=5.450;VQSLOD=4.7400;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,31:31:90.30:1230,90,0	1/1:3,12:15:29.90:396,30,0	0/0:22,0:22:56.82:0,57,633	0/0:20,0:20:39.08:0,39,427	1/1:1,28:29:84.19:1121,84,0	1/1:1,29:30:75.25:1026,75,0	1/1:0,17:17:48.16:656,48,0	0/0:39,0:39:93.24:0,93,1040	1/1:3,16:20:44.98:589,45,0	1/1:2,26:28:75.23:1007,75,0	1/1:1,19:20:57.19:778,57,0	1/1:1,18:19:51.08:673,51,0	1/1:1,28:29:72.24:984,72,0	1/1:1,21:22:60.20:820,60,0	1/1:1,28:29:81.27:1108,81,0	1/1:2,27:29:81.27:1107,81,0	0/0:22,0:22:66.16:0,66,736	0/0:19,0:19:54.07:0,54,585	0/0:24,0:24:69.20:0,69,782	0/0:31,0:31:87.25:0,87,987	0/0:22,0:22:66.15:0,66,720	1/1:2,20:22:57.10:736,57,0	1/1:2,30:32:78.08:1043,78,0	1/1:0,16:16:42.14:572,42,0	1/1:0,23:23:54.14:717,54,0	1/1:1,24:25:72.22:967,72,0	1/1:3,38:42:99:1478,111,0	1/1:0,10:10:30.10:410,30,0
chr10	30620339	.	C	CAGATATTAAAAATTCTCCAA	91418.39	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=1.717;DP=692;FS=1.408;HRun=0;HaplotypeScore=311.2065;InbreedingCoeff=0.9921;MQ=81.68;MQ0=0;MQRankSum=-18.291;QD=184.31;ReadPosRankSum=2.760;VQSLOD=4.0859;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:18,6:28:57.20:4302,57,0	1/1:5,1:8:15.05:1064,15,0	0/0:33,0:33:90.23:0,90,3597	0/0:21,0:21:60.15:0,60,2265	1/1:20,11:36:99:6501,99,0	1/1:16,8:27:66.23:5163,66,0	1/1:18,2:22:48.12:3148,48,0	0/0:28,0:28:72.23:0,72,3035	1/1:6,10:19:48.16:3911,48,0	1/1:14,8:29:81.25:5131,81,0	1/1:11,8:20:54.19:4537,54,0	1/1:20,14:35:96.33:7435,96,0	1/1:12,13:28:72.25:6293,72,0	1/1:14,6:22:63.22:4301,63,0	1/1:12,5:23:51.09:2940,51,0	1/1:18,8:28:75.26:5202,75,0	0/0:26,0:26:78.21:0,78,3557	0/0:18,0:18:48.16:0,48,2583	0/0:19,0:19:32.76:0,33,2244	0/0:22,0:22:66.18:0,66,3324	0/0:29,0:29:81.28:0,81,3899	1/1:22,9:32:87.17:5454,87,0	1/1:25,3:34:78.21:5171,78,0	1/1:9,3:12:30.09:2109,30,0	1/1:12,7:23:57.19:4146,57,0	1/1:19,9:34:96.27:6956,96,0	1/1:19,9:32:84.29:6503,84,0	1/1:2,2:4:12.04:1153,12,0
chr10	30620596	.	TCA	T	3085.37	PASS	AB=0.987;AC=30;AF=0.536;AN=56;BaseQRankSum=17.170;DP=537;FS=2.033;HRun=0;HaplotypeScore=117.6347;InbreedingCoeff=0.3379;MQ=78.66;MQ0=0;MQRankSum=-3.707;QD=7.95;ReadPosRankSum=10.542;VQSLOD=2.1012;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:38,0:38:23.40:229,23,0	0/1:10,0:10:39.58:62,0,40	0/0:17,0:17:10.25:0,10,399	0/0:17,0:17:30.85:0,31,381	0/1:24,1:25:47.50:192,0,48	1/1:14,0:14:27.07:118,27,0	1/1:24,1:25:14.07:227,14,0	0/0:21,0:21:53.95:0,54,699	0/1:21,0:21:40.94:159,0,41	1/1:12,1:13:9.08:173,9,0	0/1:12,0:12:59.08:59,0,65	0/1:17,0:17:1.36:142,0,1	0/1:21,0:21:11.34:209,0,11	0/1:17,0:17:4.13:147,0,4	1/1:26,0:26:26.96:284,27,0	0/1:20,0:19:2.52:136,0,3	0/0:30,0:30:83.78:0,84,1280	0/0:10,0:10:29.93:0,30,450	0/0:20,0:20:60.05:0,60,927	0/0:9,0:9:26.89:0,27,360	0/0:25,0:25:72.25:0,72,1222	1/1:18,0:18:23.81:198,24,0	0/1:9,1:10:0.30:119,0,0	1/1:25,0:25:10.70:218,11,0	1/1:20,0:19:17.29:185,17,0	0/1:20,0:20:72.74:132,0,73	1/1:22,0:22:20.17:219,20,0	1/1:14,0:14:1.46:69,1,0
chr10	30620598	.	ACC	A	9687.28	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=12.307;DP=532;FS=11.351;HRun=9;HaplotypeScore=97.0247;InbreedingCoeff=0.9909;MQ=77.42;MQ0=0;MQRankSum=-3.278;QD=25.23;ReadPosRankSum=6.868;VQSLOD=2.9593;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,32:38:71.98:800,72,0	1/1:2,7:9:21.06:245,21,0	0/0:16,0:16:20.41:0,20,257	0/0:16,0:16:36.72:0,37,389	1/1:8,18:26:39.10:450,39,0	1/1:0,14:14:30.09:350,30,0	1/1:4,21:25:60.17:698,60,0	0/0:20,0:20:29.88:0,30,408	1/1:3,17:20:51.07:575,51,0	1/1:3,11:14:36.10:416,36,0	1/1:4,9:13:12.02:139,12,0	1/1:2,13:15:33.09:384,33,0	1/1:3,18:21:48.13:559,48,0	1/1:2,15:17:36.11:418,36,0	1/1:1,24:25:69.20:801,69,0	1/1:2,18:20:48.06:540,48,0	0/0:25,0:29:79.64:0,80,1071	0/0:9,0:10:29.55:0,30,423	0/0:20,0:20:51.16:0,51,806	0/0:10,0:10:21.02:0,21,250	0/0:27,0:27:77.90:0,78,1141	1/1:1,17:18:42.12:488,42,0	1/1:2,8:10:21.06:244,21,0	1/1:3,22:25:63.18:734,63,0	1/1:1,18:19:42.12:489,42,0	1/1:5,14:19:39.09:452,39,0	1/1:3,19:22:57.15:663,57,0	1/1:1,13:14:21.06:245,21,0
chr10	30621188	.	T	TGATAGTCC	27784.28	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-11.429;DP=592;FS=23.015;HRun=0;HaplotypeScore=132.2286;InbreedingCoeff=0.9856;MQ=64.47;MQ0=0;MQRankSum=-15.966;QD=71.61;ReadPosRankSum=1.494;VQSLOD=3.2943;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,24:34:66.23:2822,66,0	1/1:2,6:8:18.06:769,18,0	0/0:13,0:13:38.31:0,38,818	0/0:13,0:13:19.03:0,19,551	1/1:10,17:28:48.16:2039,48,0	1/1:6,10:17:35.95:1424,36,0	1/1:7,9:16:29.93:1167,30,0	0/0:27,0:27:66.17:0,66,1599	1/1:5,8:13:24.08:1024,24,0	1/1:9,15:26:57.15:2127,57,0	1/1:8,11:19:39.13:1656,39,0	1/1:6,16:23:48.12:1909,48,0	1/1:6,7:14:27.09:1150,27,0	1/1:6,9:17:24.04:917,24,0	1/1:11,14:27:36.08:1426,36,0	1/1:10,6:16:21.07:898,21,0	0/0:33,0:33:99:0,99,2490	0/0:21,0:21:54.17:0,54,1318	0/0:29,0:29:72.10:0,72,1783	0/0:32,0:32:90.31:0,90,2396	0/0:36,0:36:96.28:0,96,2413	1/1:7,8:17:24.08:1025,24,0	1/1:6,11:20:30.10:1273,30,0	1/1:13,13:25:29.83:1274,30,0	1/1:5,13:20:39.13:1663,39,0	1/1:5,10:15:36.04:1389,36,0	1/1:11,12:24:39.07:1561,39,0	1/1:7,0:7:8.99:270,9,0
chr10	30625227	.	T	TG	22987.43	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-3.004;DP=749;FS=0.981;HRun=1;HaplotypeScore=87.3067;InbreedingCoeff=0.9999;MQ=84.37;MQ0=0;MQRankSum=-9.468;QD=41.64;ReadPosRankSum=5.593;VQSLOD=4.8220;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,50:51:99:2177,147,0	1/1:0,12:12:30.10:449,30,0	0/0:19,0:19:51.14:0,51,634	0/0:35,0:35:99:0,99,1199	1/1:1,23:24:63.21:943,63,0	1/1:0,15:15:45.15:673,45,0	1/1:0,32:32:81.27:1214,81,0	0/0:20,0:20:57.19:0,57,740	1/1:2,28:30:87.18:1251,87,0	1/1:0,36:36:99:1619,108,0	1/1:1,13:14:36.12:539,36,0	1/1:2,30:32:90.26:1319,90,0	1/1:0,21:21:63.21:943,63,0	1/1:2,45:47:99:1987,135,0	1/1:0,40:40:99:1752,117,0	1/1:0,20:20:57.19:854,57,0	0/0:33,0:33:87.28:0,87,1129	0/0:28,0:28:78.25:0,78,1012	0/0:16,0:16:48.16:0,48,623	0/0:12,0:12:36.12:0,36,467	0/0:34,0:34:99:0,99,1271	1/1:1,22:23:57.19:853,57,0	1/1:0,24:24:60.20:899,60,0	1/1:2,32:34:93.27:1358,93,0	1/1:0,21:21:60.20:899,60,0	1/1:0,34:34:99:1508,102,0	1/1:1,17:18:48.16:719,48,0	1/1:0,23:23:69.23:1034,69,0
chr10	30625298	.	TAA	T	5444.28	PASS	AB=0.737;AC=39;AF=0.696;AN=56;BaseQRankSum=10.469;DP=561;FS=2.492;HRun=15;HaplotypeScore=138.5351;InbreedingCoeff=0.8289;MQ=70.06;MQ0=1;MQRankSum=-2.440;QD=13.85;ReadPosRankSum=7.570;VQSLOD=2.9088;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,23:36:60.60:570,61,0	1/1:1,2:3:6:53,6,0	0/0:21,0:14:7.85:0,8,113	0/0:16,1:12:0.63:0,1,77	1/1:12,5:18:11.70:115,12,0	1/1:3,16:19:53.70:451,54,0	1/1:10,7:19:11.38:166,11,0	0/0:27,0:32:60.89:0,61,605	1/1:9,9:19:27.59:253,28,0	1/1:10,8:19:24.39:227,24,0	1/1:4,11:15:29.89:264,30,0	1/1:12,10:23:37.26:313,37,0	1/1:6,9:15:32.71:272,33,0	1/1:14,16:31:56.24:474,56,0	0/1:18,2:28:24.32:24,0,63	1/1:5,8:16:25.88:251,26,0	0/0:19,0:19:38.73:0,39,417	0/0:19,0:25:51.52:0,52,575	0/0:19,0:19:41.99:0,42,470	0/0:21,0:21:50.29:0,50,471	0/0:12,0:12:26.75:0,27,288	1/1:6,8:14:23.45:194,23,0	1/1:10,4:14:14.92:132,15,0	1/1:10,28:38:83.36:712,83,0	1/1:2,7:10:17.61:144,18,0	1/1:7,11:19:32.64:276,33,0	1/1:5,12:17:18.85:289,19,0	1/1:10,9:19:29.77:264,30,0
chr10	30627234	.	T	TA	12550.83	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=10.849;DP=650;FS=1.171;HRun=9;HaplotypeScore=86.2620;InbreedingCoeff=0.9967;MQ=77.96;MQ0=0;MQRankSum=-1.959;QD=25.72;ReadPosRankSum=3.514;VQSLOD=5.0090;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,35:42:96.23:1050,96,0	1/1:1,7:8:21.05:229,21,0	0/0:15,0:15:23.95:0,24,201	0/0:13,0:13:18.62:0,19,193	1/1:1,15:16:42.11:464,42,0	1/1:5,23:28:63.16:688,63,0	1/1:6,11:17:21.06:232,21,0	0/0:35,0:35:95.97:0,96,833	1/1:2,20:22:51.14:564,51,0	1/1:5,27:33:84.05:901,84,0	1/1:2,16:18:45.08:483,45,0	1/1:4,20:24:57.15:631,57,0	1/1:5,25:30:55.13:823,55,0	1/1:4,21:25:48.01:531,48,0	1/1:4,19:23:48.13:531,48,0	1/1:1,21:22:56.99:630,57,0	0/0:22,0:22:50.97:0,51,443	0/0:20,0:20:50.44:0,50,421	0/0:22,0:22:47.98:0,48,417	0/0:27,0:27:74.96:0,75,647	0/0:8,0:8:24:0,24,208	1/1:5,22:27:60.12:650,60,0	1/1:3,24:27:66.18:730,66,0	1/1:3,15:18:39.11:431,39,0	1/1:2,29:31:84.20:917,84,0	1/1:5,27:32:57.97:832,58,0	1/1:3,23:27:72.01:767,72,0	1/1:2,15:17:42.11:464,42,0
chr10	30628196	.	GGA	G	198.29	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.170;DP=637;FS=0.970;HRun=0;HaplotypeScore=125.3573;InbreedingCoeff=0.9033;MQ=87.76;MQ0=0;MQRankSum=-1.223;QD=9.91;ReadPosRankSum=-0.030;VQSLOD=3.4522;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:69.04:0,69,658	0/0:9,0:9:24.04:0,24,228	0/0:20,0:20:43.79:0,44,859	0/0:24,0:25:58.14:0,58,938	0/0:32,0:32:73.32:0,73,862	0/0:31,0:31:84.11:0,84,789	0/0:25,0:25:72.07:0,72,665	0/0:25,0:25:60.19:0,60,972	0/0:17,0:17:48.07:0,48,456	0/0:22,0:22:62.12:0,62,596	0/0:20,0:20:44.53:0,45,408	0/0:28,0:28:75.07:0,75,696	0/0:23,0:23:66.06:0,66,610	0/0:23,0:23:63.05:0,63,604	1/1:15,5:20:35.80:293,36,0	0/0:23,0:23:59.96:0,60,588	0/0:32,0:32:96.25:0,96,1571	0/0:20,0:20:57.16:0,57,931	0/0:23,0:23:69.23:0,69,1148	0/0:23,0:23:63.13:0,63,910	0/0:27,0:27:78.26:0,78,1337	0/0:22,0:22:53.62:0,54,532	0/0:22,0:22:51.05:0,51,478	0/0:26,0:26:72.10:0,72,680	0/0:18,0:18:54.06:0,54,513	0/0:18,0:18:51.07:0,51,497	0/0:37,0:37:96.13:0,96,944	0/0:2,0:2:6.01:0,6,57
chr10	30628197	.	GA	G	348.93	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-0.455;DP=630;FS=0.000;HRun=1;HaplotypeScore=110.5286;InbreedingCoeff=0.8998;MQ=88.06;MQ0=0;MQRankSum=0.114;QD=19.39;ReadPosRankSum=-0.453;VQSLOD=3.5348;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:67.11:0,67,417	0/0:9,0:9:23.22:0,23,130	0/0:20,0:20:46.71:0,47,682	0/0:24,1:25:58.10:0,58,771	0/0:32,0:32:70.88:0,71,557	0/0:32,0:32:81.40:0,81,469	0/0:25,0:25:70.10:0,70,432	0/0:25,0:25:60.13:0,60,775	0/0:18,0:18:46.44:0,46,260	0/0:21,0:21:52.79:0,53,362	0/0:19,0:19:42.93:0,43,235	0/0:27,0:27:73.24:0,73,474	0/0:24,0:24:64.22:0,64,389	0/0:23,0:23:61.32:0,61,385	1/1:5,13:18:38.97:444,39,0	0/0:23,0:23:58.26:0,58,359	0/0:32,0:32:96.24:0,96,1250	0/0:20,0:20:57.15:0,57,743	0/0:23,0:23:69.21:0,69,900	0/0:24,0:24:63.10:0,63,748	0/0:26,0:26:78.26:0,78,1061	0/0:21,0:21:52.48:0,52,383	0/0:21,0:21:49.56:0,50,295	0/0:26,0:26:69.76:0,70,398	0/0:18,0:18:52.62:0,53,326	0/0:17,0:17:50.13:0,50,361	0/0:36,0:36:93.25:0,93,583	0/0:2,0:2:5.81:0,6,32
chr10	30628198	.	A	AG	10911.64	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-7.048;DP=630;FS=15.248;HRun=8;HaplotypeScore=74.4124;InbreedingCoeff=0.9772;MQ=87.52;MQ0=0;MQRankSum=-2.134;QD=26.17;ReadPosRankSum=4.118;VQSLOD=4.0840;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,19:23:57.17:658,57,0	1/1:0,8:8:24.07:277,24,0	0/0:20,0:20:53.74:0,54,470	0/0:24,0:24:53.55:0,54,456	1/1:4,27:31:75.14:836,75,0	1/1:3,29:32:78.23:900,78,0	1/1:6,20:26:57.17:658,57,0	0/0:27,0:27:57:0,57,518	1/1:0,18:18:48.14:554,48,0	1/1:4,18:22:29.70:596,30,0	1/1:1,18:19:42.12:485,42,0	1/1:7,20:27:54.16:623,54,0	1/1:5,20:25:54.16:623,54,0	1/1:4,20:24:26.70:561,27,0	0/0:18,0:18:21.51:0,22,58	1/1:2,21:23:53.99:623,54,0	0/0:32,0:32:90.01:0,90,816	0/0:19,0:19:51.03:0,51,467	0/0:24,0:24:69.02:0,69,626	0/0:23,0:23:41.98:0,42,379	0/0:26,0:26:72.01:0,72,653	1/1:9,13:22:11.61:373,12,0	1/1:3,16:19:45.13:518,45,0	1/1:1,25:26:69.21:796,69,0	1/1:2,14:16:42.12:485,42,0	1/1:7,11:18:30.08:336,30,0	1/1:6,30:36:59.81:942,60,0	1/1:0,2:2:6.02:69,6,0
chr10	30629394	.	G	GT	5039.40	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=10.394;DP=610;FS=9.493;HRun=10;HaplotypeScore=115.1830;InbreedingCoeff=0.9753;MQ=85.68;MQ0=0;MQRankSum=-3.182;QD=11.51;ReadPosRankSum=1.590;VQSLOD=3.4303;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,2:33:65.81:364,66,0	1/1:1,0:9:17.16:90,17,0	0/0:25,0:25:41.72:0,42,320	0/0:16,0:19:21.75:0,22,178	1/1:4,0:23:57.11:296,57,0	1/1:5,0:26:51.17:257,51,0	1/1:5,2:22:34.56:208,35,0	0/0:38,0:38:51.85:0,52,620	1/1:2,0:16:39.25:215,39,0	1/1:7,0:27:63.24:364,63,0	1/1:6,0:26:54.40:286,54,0	1/1:2,0:27:54.31:278,54,0	1/1:5,1:15:28.68:160,29,0	1/1:1,0:23:62.79:320,63,0	1/1:2,17:20:41.61:409,42,0	1/1:6,1:22:37.77:209,38,0	0/0:22,1:25:31.99:0,32,448	0/0:15,1:16:12.95:0,13,313	0/0:15,0:15:38.95:0,39,320	0/0:21,0:21:44.92:0,45,369	0/0:12,0:12:26.95:0,27,222	1/1:3,1:22:44.32:253,44,0	1/1:4,0:23:39.93:205,40,0	1/1:0,2:23:48.53:260,49,0	1/1:2,0:20:34.12:171,34,0	1/1:4,2:25:54.87:308,55,0	1/1:5,1:34:49.71:339,50,0	1/1:0,1:2:5.88:47,6,0
chr10	30630611	.	A	AT	5653.27	PASS	AB=0.743;AC=39;AF=0.696;AN=56;BaseQRankSum=-6.845;DP=517;FS=2.399;HRun=13;HaplotypeScore=60.7614;InbreedingCoeff=0.4020;MQ=75.02;MQ0=0;MQRankSum=0.199;QD=12.76;ReadPosRankSum=1.960;VQSLOD=5.2108;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,21:23:36.93:476,37,0	0/1:2,8:11:2.73:108,0,3	0/0:14,0:13:13.12:0,13,83	0/1:12,0:11:2.85:3,0,8	1/1:11,17:29:30.34:402,30,0	1/1:2,16:18:48.05:446,48,0	1/1:3,10:13:13.90:235,14,0	0/1:25,2:29:1.13:1,0,265	1/1:4,17:21:25.84:365,26,0	0/1:8,20:28:22.27:386,0,22	1/1:3,17:23:15.19:355,15,0	1/1:6,15:22:8.99:216,9,0	1/1:2,9:11:18.02:167,18,0	0/1:3,13:16:2.56:121,0,3	0/1:5,11:17:5.29:229,0,5	1/1:3,8:11:6.45:202,6,0	0/0:20,0:20:47.53:0,48,329	0/1:17,2:21:10.01:10,0,211	0/1:16,1:19:2.65:3,0,242	0/0:29,2:31:43.48:0,43,445	0/0:9,0:9:23.75:0,24,161	1/1:6,13:20:41.89:377,42,0	1/1:5,12:20:21.86:303,22,0	0/1:3,3:6:11.57:47,0,12	1/1:4,9:14:26.71:223,27,0	1/1:4,12:16:18.46:314,18,0	1/1:6,20:28:53.44:460,53,0	1/1:3,10:15:20.02:204,20,0
chr10	30631231	.	CCA	C	326.37	PASS	AB=0.980;AC=23;AF=0.426;AN=54;BaseQRankSum=8.083;DP=526;FS=10.320;HRun=0;HaplotypeScore=77.4141;InbreedingCoeff=-0.0329;MQ=61.13;MQ0=10;MQRankSum=-0.676;QD=1.05;ReadPosRankSum=-0.328;VQSLOD=0.7387;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:21,0:20:5.32:5,0,28	0/0:4,0:4:0.47:0,0,1	0/0:14,0:6:0.89:0,1,2	./.	1/1:14,0:14:8.15:35,8,0	0/1:16,0:16:14.17:14,0,16	0/0:20,0:17:0.75:0,1,3	0/0:26,0:26:6.01:0,6,65	0/1:22,0:22:12.31:20,0,12	0/0:11,0:11:5.83:0,6,37	0/0:12,0:12:3:0,3,25	1/1:13,0:12:8.49:35,8,0	0/1:21,0:21:11.84:12,0,36	0/1:24,0:24:30.78:33,0,31	1/1:22,0:22:4.26:57,4,0	1/1:11,0:11:1.81:5,2,0	0/1:26,1:28:41.76:42,0,312	0/0:24,1:24:2.82:0,3,340	0/1:13,3:16:15.42:72,0,15	0/0:16,0:16:12.01:0,12,138	0/0:30,0:30:5.12:0,5,410	0/1:17,0:17:0.10:0,0,46	0/1:20,0:20:12.58:19,0,13	0/1:30,0:30:18.09:53,0,18	1/1:12,0:12:4.04:16,4,0	0/0:25,0:25:9.82:0,10,59	0/1:17,0:16:31.70:35,0,32	1/1:8,0:8:5.35:22,5,0
chr10	30631263	.	ACACACACACACG	A	1107.57	PASS	AB=1.000;AC=12;AF=0.214;AN=56;BaseQRankSum=-2.111;DP=624;FS=13.208;HRun=0;HaplotypeScore=177.4901;InbreedingCoeff=-0.0836;MQ=56.12;MQ0=20;MQRankSum=1.550;QD=5.01;ReadPosRankSum=-5.725;VQSLOD=-0.2060;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:28:98.85:99,0,644	0/0:3,0:3:6.02:0,6,113	0/0:32,0:16:38.23:0,38,499	0/0:23,0:6:17.88:0,18,143	0/0:16,0:15:9.02:0,9,160	0/0:22,0:22:9.03:0,9,199	0/1:24,0:21:99:134,0,392	0/0:28,0:27:68.34:0,68,986	0/0:27,0:27:15.05:0,15,277	0/1:15,0:15:45.20:45,0,315	0/1:16,0:16:60.98:61,0,385	0/1:17,0:16:37.31:37,0,464	0/0:23,0:23:15.48:0,15,201	0/1:24,0:24:26.51:27,0,327	1/1:15,14:28:18.67:564,19,0	0/1:14,0:14:14.72:15,0,387	0/0:38,0:38:95.89:0,96,3491	0/0:25,0:24:63.86:0,64,2111	0/0:18,0:17:39.71:0,40,707	0/0:18,0:18:42.02:0,42,1151	0/0:38,0:38:77.89:0,78,2615	0/0:19,0:19:16.82:0,17,603	0/0:16,0:16:19:0,19,372	0/0:40,0:40:30.10:0,30,599	0/1:14,0:14:73.96:150,0,74	0/1:24,0:23:85.14:85,0,809	0/0:17,0:17:24.08:0,24,515	0/1:15,0:15:46.83:47,0,525
chr10	30631269	.	ACACACG	A	3645.49	PASS	AB=1.000;AC=40;AF=0.714;AN=56;BaseQRankSum=0.828;DP=607;FS=1.908;HRun=0;HaplotypeScore=117.0047;InbreedingCoeff=0.7465;MQ=58.32;MQ0=18;MQRankSum=-0.567;QD=8.94;ReadPosRankSum=0.489;VQSLOD=1.9024;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:25:2.52:194,0,3	1/1:3,0:3:8.92:65,9,0	0/0:31,0:16:44.29:0,44,322	0/0:21,0:8:23.90:0,24,211	1/1:15,1:15:8.61:94,9,0	1/1:22,0:22:5.54:25,6,0	1/1:22,0:19:15.57:252,16,0	0/0:29,0:28:63.75:0,64,586	1/1:24,1:25:11.39:93,11,0	1/1:13,0:13:26.13:212,26,0	1/1:14,0:14:30.40:245,30,0	1/1:18,0:17:35.12:245,35,0	1/1:21,1:22:5.49:81,5,0	1/1:23,1:24:11.43:142,11,0	1/1:25,0:24:15.05:242,15,0	1/1:16,0:16:33.96:257,34,0	0/0:38,0:38:76.14:0,76,1658	0/0:23,0:23:26.51:0,27,1002	0/1:16,0:15:5.93:6,0,257	0/0:18,0:18:32.97:0,33,570	0/0:39,0:39:64.83:0,65,1392	1/1:19,0:19:19.91:260,20,0	1/1:5,11:16:1.08:127,1,0	1/1:38,1:39:19.21:86,19,0	1/1:13,1:14:27.45:271,27,0	1/1:24,0:23:24.33:387,24,0	1/1:17,1:18:4.42:104,4,0	1/1:16,0:16:35.96:259,36,0
chr10	30631271	.	ACACG	A	5518.41	PASS	AB=1.000;AC=41;AF=0.732;AN=56;BaseQRankSum=0.272;DP=602;FS=5.085;HRun=0;HaplotypeScore=93.4664;InbreedingCoeff=0.8387;MQ=61.19;MQ0=16;MQRankSum=-0.540;QD=13.69;ReadPosRankSum=0.107;VQSLOD=4.1544;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:26,1:26:25.76:374,26,0	1/1:3,0:3:8.92:65,9,0	0/0:33,0:18:41.67:0,42,341	0/0:20,0:9:26.89:0,27,234	1/1:2,14:15:9.03:150,9,0	1/1:2,20:22:6.02:113,6,0	1/1:19,2:18:44.88:405,45,0	0/0:29,0:28:61.48:0,61,490	1/1:4,21:25:12.01:188,12,0	1/1:15,0:15:30.12:244,30,0	1/1:14,0:14:32.92:268,33,0	1/1:15,3:17:39.37:404,39,0	1/1:4,18:22:6.36:93,6,0	1/1:7,17:24:11.90:184,12,0	1/1:17,0:16:15.04:172,15,0	1/1:16,0:16:44.64:418,45,0	0/0:38,0:38:26.01:0,26,1127	0/0:22,0:22:20.61:0,21,642	0/1:17,0:16:28.12:28,0,215	0/0:19,0:19:35.96:0,36,483	0/0:38,0:38:66:0,66,1027	1/1:19,1:20:41.67:371,42,0	1/1:14,2:16:14.55:186,15,0	1/1:5,34:39:21.07:396,21,0	1/1:13,0:13:29.99:283,30,0	1/1:24,0:23:58.44:478,58,0	1/1:3,15:18:20.74:310,21,0	1/1:14,2:16:41.84:387,42,0
chr10	30632454	.	A	AGT	336.80	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.076;DP=660;FS=10.749;HRun=0;HaplotypeScore=126.8667;InbreedingCoeff=0.8024;MQ=56.22;MQ0=17;MQRankSum=0.550;QD=21.05;ReadPosRankSum=0.263;VQSLOD=3.9164;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:81.05:0,81,962	0/0:9,0:9:21.07:0,21,262	0/0:41,0:14:38.24:0,38,416	0/0:46,0:16:23.42:0,23,251	0/0:29,0:29:15.05:0,15,187	0/0:29,0:29:51.16:0,51,638	0/0:23,0:23:24.06:0,24,285	0/0:31,0:31:63.18:0,63,765	0/0:20,0:19:51.15:0,51,621	0/0:27,0:27:60.08:0,60,745	0/0:13,0:13:3:0,3,26	0/0:25,0:25:63.20:0,63,784	0/0:25,0:24:60.19:0,60,737	0/0:17,0:18:39.10:0,39,472	1/1:8,8:16:27.09:431,27,0	0/0:24,0:23:57.03:0,57,697	0/0:22,0:22:57.18:0,57,705	0/0:13,0:12:29.81:0,30,335	0/0:19,0:19:48.12:0,48,565	0/0:25,0:25:69.22:0,69,852	0/0:21,0:20:42.13:0,42,525	0/0:17,0:17:21.07:0,21,262	0/0:28,0:28:11.02:0,11,126	0/0:30,0:30:66.12:0,66,778	0/0:15,0:15:30.05:0,30,368	0/0:22,0:22:60.18:0,60,738	0/0:19,0:19:42.11:0,42,497	0/0:17,0:17:36.12:0,36,450
chr10	30632482	.	AGT	A	5441.79	PASS	AB=0.839;AC=31;AF=0.554;AN=56;BaseQRankSum=2.670;DP=635;FS=9.239;HRun=0;HaplotypeScore=115.7613;InbreedingCoeff=0.5819;MQ=47.85;MQ0=34;MQRankSum=1.711;QD=14.03;ReadPosRankSum=6.135;VQSLOD=4.0247;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:37,0:36:20.39:561,20,0	1/1:10,0:10:18.43:187,18,0	0/0:29,0:3:5.97:0,6,56	0/0:35,0:7:1.03:0,1,33	0/1:5,22:27:12.72:13,0,17	1/1:28,0:27:12.49:365,12,0	0/0:8,15:19:0:0,0,0	0/0:36,0:32:78.16:0,78,1166	0/1:19,0:17:0.95:316,0,1	1/1:6,18:24:33.12:467,33,0	0/0:3,14:17:7.21:0,7,60	1/1:21,0:21:37.47:558,37,0	1/1:21,0:20:47.07:404,47,0	1/1:22,0:21:35.61:358,36,0	0/1:9,0:13:11.36:21,0,11	1/1:20,0:19:12.67:308,13,0	0/0:23,0:23:51.05:0,51,783	0/0:16,0:13:37.63:0,38,474	0/0:21,0:19:54.13:0,54,778	0/0:27,0:26:63.54:0,64,909	0/0:20,0:17:35.66:0,36,580	0/1:19,0:19:7.86:140,0,8	1/1:7,19:26:2.89:27,3,0	1/1:26,0:26:42.78:443,43,0	0/1:18,2:19:2.67:148,0,3	1/1:26,0:25:10.26:571,10,0	1/1:14,0:13:14.74:218,15,0	1/1:14,0:13:26.94:336,27,0
chr10	30635722	.	GCATACACACACACACACACACACA	G	4731.43	PASS	AB=0.796;AC=34;AF=0.630;AN=54;BaseQRankSum=5.234;DP=618;FS=2.023;HRun=0;HaplotypeScore=294.2998;InbreedingCoeff=0.6659;MQ=64.88;MQ0=17;MQRankSum=1.072;QD=13.71;ReadPosRankSum=1.040;VQSLOD=2.7633;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:27:18.59:230,19,0	1/1:3,9:12:5.99:218,6,0	0/0:28,0:15:4.24:0,4,29	0/0:43,0:20:8.42:0,8,49	1/1:7,14:21:3.48:17,3,0	1/1:5,13:18:6.02:151,6,0	1/1:21,0:21:24.01:291,24,0	0/0:27,0:25:35.40:0,35,507	1/1:8,17:25:15.05:880,15,0	0/1:10,0:10:2.60:155,0,3	1/1:7,10:17:4.26:180,4,0	1/1:9,16:25:3.01:159,3,0	1/1:9,11:20:9.03:558,9,0	1/1:7,13:20:3.01:188,3,0	0/0:23,0:23:8.72:0,9,83	1/1:6,12:18:12.04:720,12,0	0/0:29,0:29:53.16:0,53,3955	0/0:19,0:18:27.05:0,27,1722	0/0:20,0:19:21.03:0,21,791	0/0:21,0:21:39.09:0,39,1163	0/0:47,0:47:98.91:0,99,5394	0/1:5,11:16:0.27:0,0,0	./.	1/1:13,19:32:0.89:2,1,0	1/1:8,10:18:3.01:124,3,0	1/1:22,0:22:41.87:432,42,0	1/1:15,0:14:20.46:237,20,0	1/1:0,7:7:3.01:188,3,0
chr10	30635735	.	CACACACACACACAT	C	2912.62	PASS	AB=1.000;AC=37;AF=0.685;AN=54;BaseQRankSum=7.304;DP=572;FS=20.466;HRun=0;HaplotypeScore=180.8272;InbreedingCoeff=0.6925;MQ=56.43;MQ0=24;MQRankSum=-2.393;QD=8.93;ReadPosRankSum=1.284;VQSLOD=1.3344;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:23:26.93:215,27,0	1/1:10,0:10:5.89:108,6,0	0/0:23,0:10:2.94:0,3,26	0/0:31,0:7:5.20:0,5,38	1/1:20,0:20:5.35:45,5,0	1/1:16,0:15:5.88:36,6,0	1/1:18,0:18:16.69:186,17,0	0/0:28,0:25:24.23:0,24,464	1/1:23,0:23:15.05:432,15,0	1/1:8,0:7:17.22:140,17,0	1/1:11,0:12:3.90:90,4,0	1/1:19,0:19:3.01:70,3,0	1/1:15,0:15:9.03:290,9,0	1/1:17,0:16:3.01:99,3,0	1/1:2,31:33:9.50:364,10,0	1/1:16,0:15:12.04:368,12,0	0/0:28,0:28:56.33:0,56,3123	0/0:20,0:19:26.33:0,26,1534	0/0:20,0:19:34.86:0,35,920	0/0:20,0:20:42.01:0,42,770	0/0:63,0:62:99:0,123,4786	0/1:15,0:14:0.21:0,0,0	./.	1/1:28,0:28:0.89:2,1,0	1/1:15,0:15:3.01:34,3,0	1/1:18,0:17:41.91:348,42,0	1/1:12,0:11:20.62:167,21,0	1/1:7,0:7:3.01:99,3,0
chr10	30638295	.	G	GT	8223.13	PASS	AB=1.000;AC=39;AF=0.696;AN=56;BaseQRankSum=-10.399;DP=623;FS=5.135;HRun=10;HaplotypeScore=65.8780;InbreedingCoeff=0.8804;MQ=73.28;MQ0=0;MQRankSum=1.281;QD=18.73;ReadPosRankSum=1.797;VQSLOD=5.9115;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,42:54:50.67:895,51,0	1/1:1,10:11:27.07:288,27,0	0/0:12,0:12:11.27:0,11,125	0/1:7,0:7:11.32:11,0,39	1/1:8,26:34:50.36:711,50,0	1/1:7,9:16:5.43:263,5,0	1/1:5,11:16:30.08:320,30,0	0/0:26,1:27:24.67:0,25,396	1/1:4,17:22:41.97:431,42,0	1/1:7,17:25:41.65:401,42,0	1/1:4,17:21:41.89:405,42,0	1/1:3,25:28:35.51:583,36,0	1/1:5,16:22:34.27:408,34,0	1/1:1,16:17:42.11:448,42,0	0/0:32,1:34:50.84:0,51,606	1/1:2,19:21:41.91:448,42,0	0/0:18,0:18:47.91:0,48,389	0/0:18,0:17:53.85:0,54,431	0/0:18,0:18:38.03:0,38,288	0/0:23,0:24:12.30:0,12,315	0/0:33,0:33:60.50:0,61,632	1/1:4,23:27:39.04:392,39,0	1/1:7,17:24:15.32:331,15,0	1/1:4,18:22:48.12:511,48,0	1/1:5,20:26:32.24:378,32,0	1/1:4,18:22:25.22:424,25,0	1/1:2,17:19:45.11:479,45,0	1/1:1,3:4:9.02:96,9,0
chr10	30639292	.	G	GCGCGCA	9621.18	PASS	AB=0.545;AC=32;AF=0.571;AN=56;BaseQRankSum=-7.236;DP=534;FS=11.292;HRun=0;HaplotypeScore=111.6899;InbreedingCoeff=0.4561;MQ=54.29;MQ0=13;MQRankSum=-6.870;QD=26.50;ReadPosRankSum=5.350;VQSLOD=3.3043;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,29:40:12.71:382,13,0	1/1:1,9:10:12.04:397,12,0	0/0:14,0:5:11.10:0,11,132	0/0:21,0:13:26.24:0,26,459	1/1:4,8:14:2.62:107,3,0	1/1:3,13:22:4.94:533,5,0	0/1:4,11:19:9.52:318,0,10	0/0:32,0:32:84.01:0,84,1208	0/1:2,9:11:9.84:208,0,10	1/1:3,13:20:13.02:840,13,0	0/1:4,15:20:25.76:311,0,26	0/1:2,9:10:1.87:421,0,2	1/1:0,9:11:8.88:321,9,0	0/1:1,14:17:1.14:526,0,1	1/1:1,0:12:14.31:388,14,0	0/1:3,10:14:0.39:630,0,0	0/0:25,0:28:24.46:0,24,1094	0/0:17,0:18:42.14:0,42,861	0/0:16,0:16:42.12:0,42,717	0/0:20,0:26:72.10:0,72,1203	0/0:14,0:16:39.03:0,39,667	0/1:3,9:13:9.23:294,0,9	1/1:3,16:22:12.44:435,12,0	1/1:4,12:18:7.06:257,7,0	1/1:2,20:27:26.70:837,27,0	1/1:1,20:25:64.27:1257,64,0	0/1:1,15:22:1.79:942,0,2	1/1:0,6:7:6.02:217,6,0
chr10	30641120	.	G	GCTT	21342.55	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-13.926;DP=693;FS=17.449;HRun=0;HaplotypeScore=82.7390;InbreedingCoeff=0.9488;MQ=81.29;MQ0=1;MQRankSum=-2.605;QD=42.01;ReadPosRankSum=4.155;VQSLOD=5.1253;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:11,20:31:51.06:964,51,0	1/1:3,10:13:30.10:627,30,0	0/0:21,0:21:15.45:0,15,387	0/0:20,0:20:39.05:0,39,532	1/1:8,28:36:75.12:1432,75,0	1/1:5,18:23:42.10:837,42,0	1/1:11,13:26:0.35:834,0,0	0/0:30,0:30:66.19:0,66,917	1/1:6,18:24:48.16:1005,48,0	1/1:6,23:31:75.24:1486,75,0	1/1:3,14:18:45.11:865,45,0	1/1:3,25:29:69.24:1446,69,0	1/1:4,23:27:63.64:1262,64,0	1/1:4,14:20:42.14:879,42,0	1/1:7,27:34:63.17:1277,63,0	1/1:3,21:26:66.23:1377,66,0	0/0:29,0:29:81.23:0,81,1167	0/0:11,0:11:30.06:0,30,405	0/0:15,0:15:18.04:0,18,233	0/0:25,0:25:72.20:0,72,1033	0/0:34,0:34:90.25:0,90,1283	1/1:10,17:28:54.10:1041,54,0	1/1:5,21:27:21.34:1229,21,0	1/1:5,16:21:45.11:900,45,0	1/1:4,16:21:48.16:1005,48,0	1/1:7,26:32:75.24:1520,75,0	1/1:8,21:29:12.31:1043,12,0	1/1:7,4:11:20.96:313,21,0
chr10	30642551	.	ATAAT	A	1042.80	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.885;DP=537;FS=3.040;HRun=0;HaplotypeScore=83.3179;InbreedingCoeff=0.8293;MQ=74.68;MQ0=0;MQRankSum=-2.596;QD=41.71;ReadPosRankSum=0.395;VQSLOD=3.7739;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:36.12:0,36,968	0/0:5,0:5:15.05:0,15,420	0/0:9,0:9:24.08:0,24,608	0/0:12,0:12:2.78:0,3,602	0/0:20,0:20:60.19:0,60,1606	0/0:25,0:25:72.25:0,72,1972	0/0:17,0:17:51.18:0,51,1368	0/0:29,0:29:84.28:0,84,2217	0/0:20,0:20:60.21:0,60,1679	0/0:20,0:20:60.21:0,60,1679	0/0:31,0:31:90.31:0,90,2434	0/0:14,0:14:42.13:0,42,1107	0/0:19,0:19:57.20:0,57,1594	0/0:23,0:23:69.24:0,69,1865	1/1:1,24:25:57.20:1138,57,0	0/0:22,0:22:66.23:0,66,1824	0/0:13,0:13:39.13:0,39,1037	0/0:16,0:16:48.16:0,48,1335	0/0:22,0:21:63.22:0,63,1712	0/0:33,0:33:99:0,99,2672	0/0:7,0:7:21.07:0,21,560	0/0:19,0:19:54.19:0,54,1511	0/0:18,0:18:51.14:0,51,1356	0/0:9,0:9:27.09:0,27,755	0/0:33,0:33:99:0,99,2702	0/0:23,0:23:69.24:0,69,1876	0/0:28,0:28:84.27:0,84,2281	0/0:10,0:10:30.10:0,30,796
chr10	30643314	.	TTAGATAGATAGATAGA	T	13239.07	PASS	AC=38;AF=0.731;AN=52;BaseQRankSum=3.709;DP=591;FS=0.000;HRun=0;HaplotypeScore=275.8598;InbreedingCoeff=0.8188;MQ=62.00;MQ0=2;MQRankSum=-4.825;QD=30.86;ReadPosRankSum=2.072;VQSLOD=3.3592;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,3:16:1.94:129,2,0	1/1:7,0:11:6.02:223,6,0	./.	./.	1/1:13,0:30:45.05:1396,45,0	1/1:15,7:22:9.03:391,9,0	0/0:5,0:10:12.04:0,12,186	0/0:33,0:33:24.03:0,24,544	1/1:12,0:17:12.03:127,12,0	1/1:15,0:23:27.50:543,28,0	1/1:17,0:32:42.09:1346,42,0	1/1:12,12:24:15.05:652,15,0	1/1:14,11:25:21.07:912,21,0	1/1:10,11:21:18.06:782,18,0	1/1:13,7:20:12.04:521,12,0	1/1:10,9:19:24.08:1042,24,0	0/0:12,0:21:30.10:0,30,1160	0/0:7,0:11:12.04:0,12,637	0/0:13,0:18:18.06:0,18,797	0/0:13,0:32:75.26:0,75,1466	0/0:14,0:14:15.05:0,15,1130	1/1:11,4:15:6.02:261,6,0	1/1:16,9:25:11.47:520,11,0	1/1:7,5:12:3.01:130,3,0	1/1:13,0:26:30.10:1117,30,0	1/1:23,15:38:45.11:1584,45,0	1/1:25,14:39:33.11:1433,33,0	1/1:11,3:13:3.01:130,3,0
chr10	30644637	.	TACACACACACACACAC	T	5224.17	PASS	AB=0.832;AC=25;AF=0.463;AN=54;BaseQRankSum=5.420;DP=517;FS=7.559;HRun=0;HaplotypeScore=200.8076;InbreedingCoeff=-0.0088;MQ=63.77;MQ0=10;MQRankSum=-4.833;QD=16.07;ReadPosRankSum=1.016;VQSLOD=3.1042;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:25,10:37:4.02:569,0,4	0/0:9,0:8:2.74:0,3,12	0/0:36,0:26:0.89:0,1,2	./.	0/1:11,2:13:12.76:159,0,13	0/1:8,7:15:30.97:247,0,31	0/1:23,0:22:27.49:96,0,27	0/0:16,0:16:8.97:0,9,112	1/1:11,2:14:0.70:414,1,0	0/1:18,0:18:99:156,0,145	0/1:13,5:18:42.75:214,0,43	0/1:13,5:18:4.73:377,0,5	0/1:13,4:17:4.92:124,0,5	1/1:8,9:17:12.04:524,12,0	1/1:11,0:17:9.03:335,9,0	1/1:11,9:21:15.05:635,15,0	0/0:18,0:18:24.55:0,25,1501	0/0:10,0:10:20.70:0,21,886	0/0:18,0:17:13.47:0,13,532	0/0:14,0:13:9.01:0,9,367	0/0:48,0:47:60.15:0,60,3358	0/1:14,5:20:42.69:192,0,43	0/1:8,0:9:11.96:65,0,12	1/1:26,1:28:23.63:318,24,0	1/1:4,5:10:9.03:333,9,0	0/1:12,0:12:9.42:92,0,9	0/1:8,4:12:9.94:253,0,10	0/1:3,2:5:19.48:124,0,19
chr10	30645895	.	A	AGGTAAGATGTGAGCAGTCACTGTGAAT	49353.52	PASS	AB=0.683;AC=54;AF=0.964;AN=56;BaseQRankSum=0.204;DP=317;FS=37.732;HRun=0;HaplotypeScore=383.4051;InbreedingCoeff=-0.0503;MQ=59.71;MQ0=2;MQRankSum=-2.808;QD=155.69;ReadPosRankSum=2.369;VQSLOD=3.4769;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:11:27.02:1634,27,0	1/1:2,0:2:6.02:547,6,0	0/1:4,1:6:56.40:1008,0,56	0/1:3,0:8:2.42:1376,0,2	1/1:12,0:12:21.07:1363,21,0	1/1:14,0:14:39.13:2823,39,0	1/1:14,0:14:40.02:2374,40,0	1/1:19,0:19:54.18:3594,54,0	1/1:10,0:10:21.07:1889,21,0	1/1:11,0:11:30.10:1825,30,0	1/1:9,0:9:21.04:1720,21,0	1/1:11,0:11:27.09:1664,27,0	1/1:15,0:16:39.09:2574,39,0	1/1:11,0:11:24.08:1092,24,0	1/1:16,0:16:42.14:2629,42,0	1/1:16,0:16:36.12:2014,36,0	1/1:13,0:14:27.09:1583,27,0	1/1:6,0:6:9.03:266,9,0	1/1:11,0:11:30.10:2403,30,0	1/1:14,0:14:36.12:2365,36,0	1/1:5,0:5:3.01:141,3,0	1/1:20,0:20:49.01:2516,49,0	1/1:11,0:11:21.07:1617,21,0	1/1:12,0:12:18.06:1266,18,0	1/1:7,0:7:21.07:1489,21,0	1/1:14,0:14:39.04:2941,39,0	1/1:14,0:14:39.13:2431,39,0	1/1:1,0:1:3.01:210,3,0
chr10	30646392	.	TGA	T	883.66	PASS	AB=0.832;AC=13;AF=0.232;AN=56;BaseQRankSum=12.432;DP=361;FS=37.005;HRun=0;HaplotypeScore=98.3486;InbreedingCoeff=-0.3194;MQ=44.96;MQ0=0;MQRankSum=-7.494;QD=4.03;ReadPosRankSum=4.561;VQSLOD=0.6565;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:22.30:0,22,742	0/1:3,2:5:44.28:44,0,162	0/0:7,0:6:18.06:0,18,335	0/0:8,0:5:6.42:0,6,103	0/1:16,3:19:8.66:9,0,689	0/0:9,0:9:7.48:0,7,451	0/1:13,0:13:4.94:5,0,548	0/0:13,0:13:36.59:0,37,691	0/1:8,1:9:5.55:6,0,387	0/1:14,7:21:99:160,0,535	0/1:10,8:18:99:242,0,298	0/1:11,2:13:16.28:16,0,594	0/1:6,1:7:12.51:13,0,243	0/0:7,0:7:18.06:0,18,353	0/0:11,1:12:6.42:0,6,617	0/0:11,0:11:30.10:0,30,587	0/0:13,1:14:4.88:0,5,612	0/0:17,0:17:42.14:0,42,823	0/0:6,0:6:12.04:0,12,235	0/1:27,6:33:99:147,0,959	0/0:4,0:4:12.04:0,12,235	0/1:11,4:15:99:103,0,310	0/1:16,6:22:99:109,0,740	0/0:3,0:3:9.03:0,9,160	0/1:20,5:25:99:168,0,697	0/1:17,2:19:7.35:7,0,809	0/0:15,0:15:34.63:0,35,702	0/0:1,0:1:3.01:0,3,55
chr10	30646514	.	C	CA	11317.83	PASS	AB=1.000;AC=41;AF=0.732;AN=56;BaseQRankSum=-7.214;DP=523;FS=6.362;HRun=7;HaplotypeScore=46.9376;InbreedingCoeff=0.9436;MQ=60.78;MQ0=0;MQRankSum=-1.514;QD=29.47;ReadPosRankSum=0.999;VQSLOD=5.2710;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,21:23:54.16:643,54,0	1/1:2,10:12:30.09:361,30,0	0/0:7,0:6:9.01:0,9,87	0/1:12,0:10:0.23:0,0,77	1/1:1,18:19:51.11:593,51,0	1/1:3,17:20:45.14:543,45,0	1/1:2,17:19:36.11:435,36,0	0/0:20,0:20:51.06:0,51,488	1/1:0,11:11:30.09:362,30,0	1/1:0,22:22:66.20:797,66,0	1/1:4,22:26:63.15:741,63,0	1/1:0,14:14:39.12:467,39,0	1/1:0,15:15:42.13:507,42,0	1/1:1,17:18:54.15:638,54,0	1/1:2,12:14:33.10:398,33,0	1/1:1,18:19:42.13:507,42,0	0/0:30,0:30:81.12:0,81,782	0/0:23,0:23:54.08:0,54,521	0/0:17,0:17:39.06:0,39,376	0/0:32,0:32:87.07:0,87,823	0/0:10,0:10:30.05:0,30,289	1/1:1,14:15:42.12:494,42,0	1/1:2,18:20:48.14:571,48,0	1/1:0,12:12:33.10:399,33,0	1/1:3,17:20:45.14:543,45,0	1/1:2,28:30:81.24:968,81,0	1/1:2,25:26:69:807,69,0	1/1:0,16:16:45.14:544,45,0
chr10	30648249	.	A	AAC	5136.78	PASS	AB=0.766;AC=27;AF=0.519;AN=52;BaseQRankSum=-7.486;DP=701;FS=0.454;HRun=0;HaplotypeScore=94.9697;InbreedingCoeff=-0.3042;MQ=61.19;MQ0=11;MQRankSum=-0.089;QD=9.86;ReadPosRankSum=-1.027;VQSLOD=4.2066;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:17,15:34:60.97:415,0,61	0/1:8,4:12:18.33:154,0,18	./.	./.	0/1:14,10:23:23.45:238,0,23	0/1:18,9:27:42.68:239,0,43	1/1:17,6:24:22.22:450,22,0	0/0:27,0:27:15.02:0,15,157	0/1:15,4:19:42.70:227,0,43	1/1:17,11:29:16.45:365,16,0	0/1:6,5:11:21.34:124,0,21	0/1:20,8:29:55.39:493,0,55	0/1:8,6:14:21.35:124,0,21	0/1:16,9:27:52.71:245,0,53	0/1:19,1:26:20.82:21,0,312	0/1:14,11:26:57.06:410,0,57	0/0:26,0:32:58.81:0,59,546	0/1:25,1:27:1.04:1,0,365	0/0:8,0:7:6.02:0,6,67	0/0:27,1:34:10.84:0,11,457	0/1:47,0:49:16.59:17,0,461	1/1:9,7:16:14.97:227,15,0	0/1:10,8:18:18.76:144,0,19	1/1:9,24:34:8.67:556,9,0	0/1:15,9:25:15.33:190,0,15	1/1:9,8:17:24.05:340,24,0	0/1:10,4:15:65.80:76,0,66	0/1:6,6:13:24.35:82,0,24
chr10	30650147	.	TTTA	T	406.71	PASS	AC=8;AF=0.444;AN=18;BaseQRankSum=2.561;DP=125;FS=3.176;HRun=0;HaplotypeScore=17.0290;MQ=29.08;MQ0=58;MQRankSum=-0.903;QD=9.92;ReadPosRankSum=0.571;VQSLOD=2.3606;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	0/0:3,0:3:3.01:0,3,35	./.	./.	./.	./.	./.	1/1:14,3:3:9.03:121,9,0	./.	./.	./.	./.	./.	./.	./.	./.	0/0:9,0:7:21.07:0,21,398	0/0:20,0:14:33.11:0,33,611	1/1:12,4:5:15.02:183,15,0	1/1:3,2:5:6.02:81,6,0	1/1:0,3:3:9.03:121,9,0	./.	0/0:4,0:4:0:0,0,0	./.	0/0:4,0:3:3.01:0,3,35	./.	./.	./.
chr10	30653001	.	T	TAC	1215.81	PASS	AB=0.874;AC=33;AF=0.635;AN=52;BaseQRankSum=-1.659;DP=520;FS=0.938;HRun=0;HaplotypeScore=78.4891;InbreedingCoeff=-0.0115;MQ=62.90;MQ0=14;MQRankSum=0.975;QD=3.09;ReadPosRankSum=-0.684;VQSLOD=1.6747;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:28,6:33:42.04:42,0,62	0/0:8,1:8:2.84:0,3,14	./.	./.	0/1:10,3:14:25.77:38,0,26	0/1:17,6:23:22.89:80,0,23	1/1:20,5:25:5.55:88,6,0	1/1:23,0:21:4.32:39,4,0	1/1:11,0:10:6.02:74,6,0	1/1:24,4:28:3.90:46,4,0	1/1:8,3:11:3.01:44,3,0	0/1:13,3:16:17.19:144,0,17	0/1:12,6:18:20.23:121,0,20	0/1:19,0:19:14.80:15,0,55	1/1:23,0:23:3:26,3,0	1/1:5,3:8:3.01:44,3,0	0/0:14,0:15:17.64:0,18,146	0/0:14,0:19:17.46:0,17,153	0/0:13,0:12:4.96:0,5,42	0/0:14,0:13:6.01:0,6,64	0/1:25,0:24:15.56:16,0,21	1/1:11,4:15:3.01:44,3,0	0/1:13,0:14:31.31:90,0,31	0/1:9,2:11:54.19:56,0,54	1/1:13,2:16:6.91:90,7,0	1/1:22,0:22:3.01:26,3,0	1/1:22,0:21:8.99:75,9,0	1/1:7,7:14:12.04:173,12,0
chr10	30653046	.	A	ACACACACACC	391.01	PASS	AB=1.000;AC=8;AF=0.143;AN=56;BaseQRankSum=4.964;DP=515;FS=0.000;HRun=0;HaplotypeScore=139.0102;InbreedingCoeff=0.0718;MQ=65.81;MQ0=20;MQRankSum=-3.936;QD=3.26;ReadPosRankSum=-3.520;VQSLOD=1.3685;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:33:47.15:0,47,453	0/0:7,0:6:5.99:0,6,104	0/0:42,0:13:27.61:0,28,319	0/0:51,0:19:36.87:0,37,389	0/0:13,0:13:29.97:0,30,278	0/0:17,0:17:29.98:0,30,296	0/1:34,0:34:4.46:4,0,466	0/0:32,0:31:21.45:0,21,620	0/1:11,0:10:38.34:38,0,143	0/0:13,0:13:26.90:0,27,246	0/0:10,0:8:17.99:0,18,167	0/0:15,0:15:20.89:0,21,345	0/0:18,0:18:35.47:0,35,398	0/1:11,0:11:0.50:1,0,277	1/1:7,9:20:6.33:266,6,0	0/0:10,0:10:20.99:0,21,193	0/0:18,0:18:30.08:0,30,652	0/0:17,0:17:33.06:0,33,594	0/0:16,0:16:34.12:0,34,338	0/0:12,0:11:23.99:0,24,285	0/0:24,0:24:59.26:0,59,471	0/0:6,0:6:5.90:0,6,65	0/1:11,0:11:73.51:74,0,162	0/0:20,0:19:20.85:0,21,440	0/0:9,0:9:1.45:0,1,133	0/1:21,0:21:99:103,0,221	0/1:12,0:12:29.30:29,0,96	0/0:11,0:11:23.18:0,23,228
chr10	30654570	.	G	GCACACACACACACACA	5257.69	PASS	AB=0.860;AC=34;AF=0.654;AN=52;BaseQRankSum=-2.794;DP=556;FS=11.679;HRun=0;HaplotypeScore=196.1050;InbreedingCoeff=0.4714;MQ=61.39;MQ0=11;MQRankSum=-2.018;QD=15.60;ReadPosRankSum=-2.357;VQSLOD=2.5027;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	1/1:6,0:7:6.02:271,6,0	0/0:36,0:22:8.87:0,9,250	0/0:24,0:12:2.13:0,2,17	0/0:20,0:22:1.08:0,1,2	1/1:20,0:23:3.01:136,3,0	1/1:24,0:21:6.91:169,7,0	0/0:30,0:28:11.45:0,11,481	1/1:16,0:16:6.02:219,6,0	1/1:16,0:18:21.54:714,22,0	./.	1/1:17,0:21:6.02:263,6,0	1/1:12,0:17:8.42:257,8,0	1/1:23,0:22:12.04:327,12,0	1/1:13,0:13:11.95:189,12,0	0/1:12,0:21:0:0,0,0	0/1:17,0:17:99:134,0,539	0/0:2,0:14:15.04:0,15,465	0/1:12,0:12:28.06:28,0,532	0/0:5,0:22:8.96:0,9,164	0/0:31,0:30:3.01:0,3,106	1/1:17,0:16:6:139,6,0	0/1:12,0:16:0:0,0,0	1/1:15,6:23:1.36:3,1,0	1/1:13,0:13:15.05:465,15,0	1/1:14,5:19:39.07:1374,39,0	1/1:11,0:16:11.25:470,11,0	1/1:1,0:1:3.01:100,3,0
chr10	30654591	.	CACAG	C	418.80	PASS	AB=0.972;AC=14;AF=0.250;AN=56;BaseQRankSum=0.156;DP=546;FS=1.463;HRun=0;HaplotypeScore=119.7091;InbreedingCoeff=-0.3368;MQ=45.51;MQ0=13;MQRankSum=3.185;QD=1.25;ReadPosRankSum=-2.759;VQSLOD=1.9110;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:26:54.70:55,0,89	0/0:10,0:8:9.01:0,9,123	0/0:12,0:3:8.75:0,9,55	0/0:13,0:1:2.99:0,3,23	0/1:29,0:25:8.05:57,0,8	0/1:27,0:22:23.48:23,0,93	0/1:24,0:20:28.63:29,0,38	0/1:21,0:19:0.43:0,0,153	0/1:17,0:17:42.68:48,0,43	0/0:19,0:17:41.87:0,42,326	0/0:10,0:10:2.89:0,3,20	0/1:21,0:18:20.93:21,0,58	0/0:17,0:15:11.76:0,12,106	0/1:22,0:20:3.38:3,0,202	0/0:14,0:14:26.94:0,27,253	0/0:26,0:22:1.05:0,1,232	0/1:20,0:20:99:118,0,207	0/0:17,0:16:14.25:0,14,50	0/1:15,0:15:61.91:123,0,62	0/1:27,0:27:25.21:25,0,80	0/1:17,29:44:35.90:36,0,180	0/0:19,0:18:13.01:0,13,207	0/0:16,0:15:11.88:0,12,93	0/1:26,0:25:17.51:18,0,20	0/0:12,0:12:20.36:0,20,345	0/0:24,0:22:6.89:0,7,527	0/1:14,0:14:2.07:2,0,154	0/0:2,0:2:3.90:0,4,45
chr10	30654726	.	TAC	T	1191.28	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.845;DP=639;FS=1.608;HRun=0;HaplotypeScore=75.5227;InbreedingCoeff=0.9914;MQ=87.49;MQ0=0;MQRankSum=-0.072;QD=38.43;ReadPosRankSum=1.026;VQSLOD=5.5052;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,105,2012	0/0:12,0:12:36.12:0,36,695	0/0:29,0:29:82.51:0,83,1467	0/0:18,0:18:44.51:0,45,775	0/0:36,0:36:99:0,108,2062	0/0:17,0:17:45.11:0,45,829	0/0:16,0:16:45.15:0,45,828	0/0:29,0:29:87.29:0,87,1648	0/0:22,0:22:66.20:0,66,1223	0/0:26,0:26:75.22:0,75,1382	0/0:24,0:24:69.24:0,69,1333	0/0:31,0:30:87.30:0,87,1659	0/0:30,0:30:87.30:0,87,1652	0/0:25,0:25:69.24:0,69,1332	1/1:0,31:31:84.29:1286,84,0	0/0:24,0:24:69.24:0,69,1322	0/0:16,0:16:48.16:0,48,927	0/0:12,0:12:33.07:0,33,598	0/0:22,0:22:63.20:0,63,1184	0/0:30,0:30:84.29:0,84,1603	0/0:11,0:11:33.11:0,33,637	0/0:27,0:27:78.27:0,78,1504	0/0:18,0:18:54.19:0,54,1043	0/0:26,0:26:69.24:0,69,1317	0/0:18,0:18:54.19:0,54,1043	0/0:25,0:25:75.23:0,75,1376	0/0:23,0:23:69.24:0,69,1331	0/0:6,0:6:18.06:0,18,335
chr10	30656218	.	TTATATA	T	3601.99	PASS	AB=1.000;AC=45;AF=0.833;AN=54;BaseQRankSum=2.669;DP=246;FS=1.661;HRun=0;HaplotypeScore=53.5481;InbreedingCoeff=0.4683;MQ=86.17;MQ0=2;MQRankSum=-5.506;QD=19.90;ReadPosRankSum=2.752;VQSLOD=2.3028;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,5:9:3.01:64,3,0	1/1:5,4:9:12:212,12,0	0/0:10,0:8:3.87:0,4,25	0/1:24,0:14:22.33:22,0,78	1/1:2,3:5:6.02:102,6,0	1/1:2,6:9:12.04:233,12,0	1/1:2,3:7:5.14:164,5,0	0/0:18,0:22:32.42:0,32,783	1/1:0,8:8:12.04:255,12,0	1/1:1,2:4:9.03:170,9,0	1/1:5,2:7:6.02:90,6,0	1/1:4,3:7:6.02:128,6,0	1/1:3,1:4:3.01:64,3,0	1/1:1,0:1:3.01:64,3,0	1/1:1,0:4:1.77:3,2,0	1/1:4,4:8:9.03:185,9,0	0/0:9,0:12:30.07:0,30,718	0/0:14,0:16:36.09:0,36,942	1/1:7,7:14:23.93:337,24,0	1/1:1,2:3:3.01:63,3,0	1/1:4,2:6:2.94:20,3,0	./.	1/1:3,1:4:3.01:63,3,0	1/1:0,1:1:3.01:64,3,0	1/1:5,11:16:21.07:447,21,0	1/1:6,0:7:12.02:158,12,0	1/1:7,10:17:21.07:440,21,0	1/1:0,6:6:12.04:255,12,0
chr10	30657725	.	T	TCCCCA	1627.15	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-4.114;DP=569;FS=4.113;HRun=0;HaplotypeScore=107.2442;InbreedingCoeff=0.9677;MQ=83.21;MQ0=0;MQRankSum=-2.629;QD=36.98;ReadPosRankSum=-2.034;VQSLOD=2.9128;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:78.24:0,78,1476	0/0:14,0:14:36.12:0,36,698	0/0:23,0:23:47.81:0,48,789	0/0:24,0:23:9.61:0,10,471	0/0:20,0:20:48.16:0,48,917	0/0:16,0:16:33.11:0,33,640	0/0:20,0:20:45.12:0,45,789	0/0:26,0:26:33.10:0,33,596	0/0:27,0:27:60.21:0,60,1163	0/0:17,0:17:30.10:0,30,551	0/0:13,0:13:39.13:0,39,756	0/0:20,0:20:51.17:0,51,989	0/0:29,0:29:78.25:0,78,1463	0/0:14,0:14:36.12:0,36,685	0/0:23,0:23:57.20:0,57,1078	0/0:19,0:19:45.10:0,45,801	0/0:24,0:24:66.21:0,66,1246	0/0:26,0:26:75.26:0,75,1453	1/1:6,3:10:12:283,12,0	1/1:7,9:17:27.09:780,27,0	1/1:6,11:17:24.08:702,24,0	0/0:22,0:22:54.17:0,54,1012	0/0:21,0:21:48.16:0,48,930	0/0:20,0:20:51.17:0,51,988	0/0:24,0:24:66.23:0,66,1280	0/0:20,0:20:45.14:0,45,828	0/0:21,0:21:54.11:0,54,878	0/0:7,0:7:21.07:0,21,407
chr10	30657828	.	A	ACCAGTGTGAAC	2893.93	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-5.754;DP=592;FS=3.212;HRun=0;HaplotypeScore=181.2143;InbreedingCoeff=0.9021;MQ=84.69;MQ0=0;MQRankSum=-7.177;QD=131.54;ReadPosRankSum=-0.399;VQSLOD=4.0654;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,163,5661	0/0:10,0:10:27.09:0,27,967	0/0:17,0:17:51.17:0,51,1697	0/0:22,0:22:63.21:0,63,1987	0/0:13,0:13:36.12:0,36,1296	0/0:18,0:18:54.19:0,54,1811	0/0:24,0:24:72.21:0,72,2419	0/0:30,0:30:90.30:0,90,3100	0/0:22,0:22:63.20:0,63,2167	0/0:22,0:22:66.22:0,66,2257	0/0:28,0:28:81.26:0,81,2600	0/0:20,0:20:60.21:0,60,2125	0/0:21,0:21:63.22:0,63,2349	0/0:13,0:13:36.12:0,36,1303	0/0:16,0:16:48.16:0,48,1755	0/0:18,0:18:54.17:0,54,1841	0/0:55,0:55:99:0,157,5489	0/0:29,0:29:84.29:0,84,2974	1/1:3,1:4:5.98:201,6,0	1/1:0,13:13:39.13:2294,39,0	1/1:1,3:5:9.01:527,9,0	0/0:22,0:22:66.23:0,66,2427	0/0:11,0:11:33.10:0,33,1143	0/0:36,0:36:99:0,105,3818	0/0:29,0:29:87.28:0,87,2983	0/0:14,0:14:42.14:0,42,1463	0/0:23,0:23:69.21:0,69,2339	0/0:2,0:2:6.02:0,6,224
chr10	30657943	.	C	CT	1453.59	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=1.395;DP=532;FS=2.730;HRun=6;HaplotypeScore=55.9123;InbreedingCoeff=0.8269;MQ=85.53;MQ0=0;MQRankSum=0.206;QD=21.07;ReadPosRankSum=-2.477;VQSLOD=2.5245;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,114,1147	0/0:5,0:5:15.03:0,15,153	0/1:19,0:19:17.52:18,0,275	0/0:15,0:15:16.26:0,16,229	0/0:20,0:20:57.12:0,57,575	0/0:13,0:13:39.09:0,39,398	0/0:19,0:19:54.11:0,54,544	0/0:35,0:35:78.15:0,78,791	0/0:16,0:16:42.08:0,42,421	0/0:24,0:24:69.15:0,69,700	0/0:15,0:15:42.10:0,42,428	0/0:14,0:14:36.08:0,36,367	0/0:17,0:17:39.06:0,39,390	0/0:19,0:19:48.10:0,48,490	0/0:18,0:18:39.07:0,39,398	0/0:15,0:15:39.08:0,39,394	0/0:27,0:27:69.15:0,69,704	0/0:21,0:21:51.11:0,51,520	1/1:1,11:12:33.11:415,33,0	1/1:2,11:13:33.11:415,33,0	1/1:2,23:25:60.19:755,60,0	0/0:18,0:18:42.09:0,42,428	0/0:22,0:22:63.14:0,63,642	0/0:32,0:32:78.17:0,78,796	0/0:23,0:23:60.11:0,60,604	0/0:14,0:14:42.10:0,42,429	0/0:15,0:15:33.07:0,33,337	0/0:6,0:6:15.03:0,15,153
chr10	30659521	.	TAAC	T	1683.92	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=7.843;DP=471;FS=7.337;HRun=0;HaplotypeScore=67.0335;InbreedingCoeff=0.9937;MQ=87.76;MQ0=0;MQRankSum=-3.266;QD=35.83;ReadPosRankSum=1.386;VQSLOD=4.0437;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:27.09:0,27,583	0/0:6,0:6:18.06:0,18,402	0/0:14,0:14:39.11:0,39,788	0/0:19,0:19:42.18:0,42,989	0/0:17,0:17:45.15:0,45,969	0/0:20,0:20:54.19:0,54,1206	0/0:15,0:15:42.13:0,42,878	0/0:36,0:36:99:0,99,2095	0/0:19,0:19:57.18:0,57,1193	0/0:22,0:22:60.20:0,60,1259	0/0:12,0:12:30.10:0,30,654	0/0:15,0:15:45.15:0,45,987	0/0:17,0:17:48.12:0,48,1025	0/0:22,0:22:66.21:0,66,1379	0/0:23,0:23:66.21:0,66,1333	0/0:19,0:19:57.19:0,57,1234	0/0:18,0:18:51.17:0,51,1093	0/0:17,0:17:51.16:0,51,1096	1/1:2,10:12:30.09:466,30,0	1/1:5,14:19:41.91:627,42,0	1/1:0,16:16:45.15:733,45,0	0/0:7,0:7:21.07:0,21,468	0/0:8,0:8:24.08:0,24,531	0/0:9,0:9:27.08:0,27,560	0/0:12,0:12:36.11:0,36,760	0/0:14,0:14:33.11:0,33,736	0/0:33,0:33:90.30:0,90,1932	0/0:20,0:20:60.19:0,60,1232
chr10	30660226	.	CA	C	2684.76	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=12.557;DP=854;FS=1.443;HRun=2;HaplotypeScore=96.1210;InbreedingCoeff=0.9998;MQ=85.45;MQ0=0;MQRankSum=-2.285;QD=32.74;ReadPosRankSum=1.203;VQSLOD=3.5713;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,123,1814	0/0:11,0:11:30.09:0,30,429	0/0:28,0:28:81.27:0,81,1189	0/0:26,0:26:62.51:0,63,862	0/0:29,0:29:84.26:0,84,1217	0/0:24,0:23:69.22:0,69,1014	0/0:26,0:26:78.26:0,78,1151	0/0:43,0:43:99:0,126,1797	0/0:39,0:39:99:0,117,1732	0/0:37,0:37:99:0,111,1647	0/0:27,0:27:81.26:0,81,1188	0/0:30,0:30:90.28:0,90,1310	0/0:43,0:43:99:0,129,1911	0/0:39,0:39:99:0,117,1635	0/0:45,0:45:99:0,127,1820	0/0:36,0:36:99:0,108,1599	0/0:20,0:20:60.18:0,60,874	0/0:23,0:23:69.18:0,69,988	1/1:0,18:18:54.17:691,54,0	1/1:0,32:32:93.20:1168,93,0	1/1:1,31:32:75.24:968,75,0	0/0:33,0:33:99:0,99,1453	0/0:23,0:23:69.23:0,69,1033	0/0:31,0:31:87.28:0,87,1284	0/0:35,0:35:99:0,105,1551	0/0:36,0:36:99:0,108,1600	0/0:31,0:31:90.30:0,90,1345	0/0:15,0:15:45.15:0,45,674
chr10	30660321	.	AG	A	3787.77	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=15.542;DP=734;FS=0.000;HRun=1;HaplotypeScore=106.4374;InbreedingCoeff=0.9999;MQ=80.34;MQ0=0;MQRankSum=-6.865;QD=35.73;ReadPosRankSum=2.498;VQSLOD=3.5686;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,141,2202	0/0:15,0:15:45.15:0,45,718	0/0:18,0:18:53.65:0,54,759	0/0:24,1:25:51.84:0,52,955	0/0:15,0:15:45.14:0,45,696	0/0:18,0:18:54.18:0,54,860	0/0:30,0:30:90.26:0,90,1411	0/0:27,0:27:81.27:0,81,1277	0/0:25,0:25:75.23:0,75,1170	0/0:34,0:34:99:0,102,1630	0/0:25,0:25:66.22:0,66,1048	0/0:30,0:30:90.31:0,90,1438	0/0:40,0:40:99:0,120,1918	0/0:29,0:29:87.28:0,87,1368	1/1:0,33:33:93.30:1206,93,0	0/0:33,0:33:99:0,99,1580	0/0:30,0:30:90.31:0,90,1439	0/0:12,0:12:33.11:0,33,520	1/1:3,12:15:42.09:516,42,0	1/1:1,28:29:84.26:1074,84,0	1/1:0,29:29:81.12:993,81,0	0/0:23,0:23:66.23:0,66,1055	0/0:23,0:23:69.22:0,69,1075	0/0:27,0:27:81.28:0,81,1288	0/0:24,0:24:72.25:0,72,1150	0/0:28,0:28:84.29:0,84,1343	0/0:35,0:34:99:0,105,1604	0/0:13,0:13:39.13:0,39,623
chr10	30660705	.	G	GA	5726.78	PASS	AB=0.663;AC=37;AF=0.661;AN=56;BaseQRankSum=1.712;DP=597;FS=5.044;HRun=12;HaplotypeScore=93.7009;InbreedingCoeff=0.5819;MQ=59.51;MQ0=14;MQRankSum=0.502;QD=12.64;ReadPosRankSum=1.322;VQSLOD=4.9215;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:11,27:39:24.97:545,0,25	1/1:6,7:14:20.09:222,20,0	0/0:5,0:5:9.37:0,9,41	0/0:7,0:4:5.65:0,6,33	1/1:11,17:29:17.28:270,17,0	1/1:8,20:29:53.92:509,54,0	1/1:12,17:30:22.97:371,23,0	0/0:36,0:32:65.50:0,66,479	1/1:12,10:22:27.04:263,27,0	1/1:6,9:15:24.02:226,24,0	0/1:12,17:28:0.55:300,0,1	0/1:10,10:20:19.77:151,0,20	1/1:5,9:16:14.65:105,15,0	1/1:5,11:16:21.03:204,21,0	1/1:5,13:20:29.35:311,29,0	1/1:3,10:14:32.89:306,33,0	0/0:23,0:24:43.12:0,43,414	0/0:17,1:18:14.61:0,15,261	0/0:22,0:23:48.64:0,49,330	0/1:20,4:23:14.50:15,0,239	0/0:23,2:24:18.41:0,18,291	0/1:5,12:18:11.03:196,0,11	1/1:6,13:20:29.11:296,29,0	1/1:1,16:17:36.06:350,36,0	1/1:5,10:14:28.29:266,28,0	1/1:12,11:24:35.86:324,36,0	1/1:6,24:30:3.89:364,4,0	1/1:3,5:7:14.86:131,15,0
chr10	30660998	.	GATCTAGATTAAACATTAAT	G	12103.29	PASS	AC=40;AF=0.741;AN=54;BaseQRankSum=7.796;DP=486;FS=2.432;HRun=0;HaplotypeScore=248.9280;InbreedingCoeff=0.7114;MQ=78.41;MQ0=0;MQRankSum=-7.195;QD=35.29;ReadPosRankSum=2.914;VQSLOD=3.5518;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:13:1.24:34,1,0	1/1:5,5:10:5.92:303,6,0	./.	0/0:14,0:14:3.01:0,3,53	1/1:22,11:32:21.07:751,21,0	1/1:13,5:18:12.04:604,12,0	1/1:12,0:12:9.01:177,9,0	0/0:39,0:39:24.08:0,24,798	1/1:7,10:17:18.06:908,18,0	1/1:15,10:25:30.10:1287,30,0	1/1:13,9:22:27.09:1274,27,0	1/1:9,3:12:6.02:303,6,0	1/1:10,6:16:15.05:738,15,0	1/1:7,11:18:21.07:1058,21,0	0/0:18,0:18:21.07:0,21,1616	1/1:5,6:11:15.05:758,15,0	0/0:17,0:17:33.11:0,33,1931	0/0:15,0:15:24.08:0,24,1817	1/1:21,0:21:15.52:290,16,0	1/1:21,0:21:27.56:520,28,0	0/0:10,0:10:1.25:0,1,3	1/1:6,4:10:6.02:303,6,0	1/1:13,8:21:6.02:301,6,0	0/0:10,0:10:1.25:0,1,3	1/1:5,4:9:9.03:455,9,0	1/1:11,7:18:21.03:878,21,0	1/1:17,10:27:21.07:1061,21,0	1/1:9,0:9:3.01:99,3,0
chr10	30661030	.	CATTAATATCTAGATT	C	9296.80	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=14.285;DP=391;FS=6.140;HRun=0;HaplotypeScore=182.0964;InbreedingCoeff=-0.2881;MQ=54.63;MQ0=0;MQRankSum=-8.757;QD=34.18;ReadPosRankSum=10.423;VQSLOD=1.9709;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:38.96:0,39,635	0/1:9,0:9:99:175,0,213	0/0:7,0:5:12.04:0,12,227	0/0:7,0:7:18.03:0,18,367	0/1:22,0:21:99:319,0,682	0/1:13,0:13:99:350,0,382	0/1:13,0:13:9.78:10,0,596	0/0:40,0:40:99:0,117,4374	0/1:13,0:13:99:550,0,141	0/1:15,0:15:99:702,0,203	0/1:16,0:16:99:730,0,348	0/1:12,0:12:99:160,0,454	0/1:11,0:11:99:435,0,181	0/1:15,0:15:99:639,0,206	0/0:15,0:15:45.14:0,45,2065	0/1:14,0:14:99:443,0,409	0/0:17,0:17:51.18:0,51,2507	0/0:13,0:13:39.13:0,39,2064	1/1:4,15:19:39.59:1310,40,0	1/1:3,19:22:48.13:1673,48,0	1/1:1,8:9:2.75:52,3,0	0/1:7,0:7:99:175,0,174	0/1:13,0:13:99:170,0,264	0/0:6,0:6:12.04:0,12,217	0/1:8,0:8:99:268,0,200	0/1:16,0:16:99:479,0,507	0/1:21,0:21:99:624,0,549	0/1:4,0:4:31.68:32,0,172
chr10	30663459	.	C	CT	309.91	PASS	AB=0.976;AC=24;AF=0.500;AN=48;BaseQRankSum=0.835;DP=200;FS=6.340;HRun=0;HaplotypeScore=129.5268;InbreedingCoeff=0.1757;MQ=27.17;MQ0=14;MQRankSum=0.165;QD=2.26;ReadPosRankSum=2.220;VQSLOD=2.3799;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,1:7:2.91:8,3,0	0/0:2,0:2:1.58:0,2,5	./.	./.	0/1:10,0:9:1.25:1,0,12	1/1:12,1:11:14.94:66,15,0	0/0:8,0:7:8.76:0,9,27	0/0:15,0:11:0.04:0,0,17	1/1:6,0:6:0.19:8,0,0	0/1:10,1:10:50.11:85,0,50	0/0:7,1:8:0.95:0,1,5	1/1:10,2:11:8.33:79,8,0	0/1:10,0:9:11.88:33,0,12	0/1:7,0:7:8.20:8,0,12	0/0:5,0:5:0.34:0,0,2	0/1:7,0:5:0.48:0,0,3	0/0:4,0:4:0:0,0,0	./.	1/1:4,0:1:1.25:3,1,0	1/1:5,0:4:0.58:2,1,0	1/1:12,0:10:0.93:3,1,0	0/0:6,0:6:1.58:0,2,7	0/0:11,0:10:6.37:0,6,24	1/1:9,1:10:0.08:1,0,0	1/1:7,1:8:4.10:16,4,0	0/1:14,1:14:3.52:110,0,4	0/0:2,1:3:3.41:0,3,19	./.
chr10	30663465	.	C	CT	418.86	PASS	AB=0.863;AC=21;AF=0.438;AN=48;BaseQRankSum=4.122;DP=217;FS=3.066;HRun=0;HaplotypeScore=77.9228;InbreedingCoeff=0.1184;MQ=27.00;MQ0=19;MQRankSum=0.112;QD=2.97;ReadPosRankSum=3.538;VQSLOD=2.2775;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,2:7:2.90:8,3,0	0/0:2,0:2:4.04:0,4,12	./.	./.	0/0:10,0:9:1.14:0,1,3	0/1:10,4:12:4.10:38,0,4	0/1:7,1:7:10.96:11,0,26	0/0:15,0:11:21.93:0,22,129	0/0:6,1:7:1.65:0,2,7	0/1:9,3:11:54.26:85,0,54	1/1:9,0:9:0.75:1,1,0	1/1:11,2:12:7.76:95,8,0	0/1:10,1:10:31.93:45,0,32	1/1:8,0:8:6.90:26,7,0	0/0:6,0:6:3.45:0,3,23	0/1:9,0:6:26.56:27,0,40	0/0:4,0:4:2.50:0,2,9	./.	1/1:5,0:1:1.55:4,2,0	0/0:5,0:4:2.36:0,2,11	0/0:13,0:11:5.57:0,6,55	1/1:6,0:6:3.07:12,3,0	0/1:9,3:10:0.73:1,0,1	0/0:9,1:10:4.96:0,5,45	1/1:7,2:9:2.40:9,2,0	0/1:14,2:15:9.06:188,0,9	0/0:3,0:3:5.91:0,6,38	./.
chr10	30663467	.	TC	T	492.45	PASS	AB=0.968;AC=23;AF=0.479;AN=48;BaseQRankSum=1.775;DP=222;FS=0.000;HRun=3;HaplotypeScore=66.9695;InbreedingCoeff=0.2055;MQ=26.82;MQ0=22;MQRankSum=-0.987;QD=3.49;ReadPosRankSum=2.772;VQSLOD=0.0473;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:7:2.44:0,2,5	1/1:1,1:2:5.05:43,5,0	./.	./.	1/1:10,0:9:2.59:31,3,0	0/1:14,1:12:21.76:57,0,22	0/1:8,1:7:5.63:36,0,6	0/0:15,0:11:23.06:0,23,154	1/1:6,1:7:2.07:20,2,0	0/1:13,0:11:25.56:26,0,200	1/1:9,0:9:2.75:13,3,0	1/1:12,1:12:6.93:98,7,0	0/1:11,0:10:32.15:38,0,32	1/1:8,0:8:10.34:62,10,0	0/0:6,0:6:2.71:0,3,39	0/0:10,0:7:8.72:0,9,68	0/0:4,0:4:2.11:0,2,18	./.	0/0:6,0:1:0:0,0,0	0/0:5,0:4:2.69:0,3,29	0/0:12,0:11:5.56:0,6,62	1/1:5,1:6:3.32:17,3,0	1/1:12,0:10:6.04:39,6,0	0/0:9,1:10:6.36:0,6,64	1/1:10,0:9:5.88:62,6,0	0/1:16,0:15:72.41:95,0,72	0/0:3,0:3:5.48:0,5,33	./.
chr10	30663471	.	C	CT	501.18	PASS	AB=0.950;AC=26;AF=0.520;AN=50;BaseQRankSum=4.580;DP=240;FS=0.000;HRun=0;HaplotypeScore=76.0767;InbreedingCoeff=-0.0585;MQ=26.91;MQ0=28;MQRankSum=0.227;QD=2.85;ReadPosRankSum=4.003;VQSLOD=2.4817;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:7,1:7:8.69:9,0,15	0/1:3,0:3:2.37:2,0,9	./.	./.	1/1:9,1:9:0.83:1,1,0	0/1:15,0:12:16.25:59,0,16	0/1:11,0:9:16.17:16,0,19	0/0:15,0:11:24.17:0,24,141	1/1:6,1:7:2.12:39,2,0	0/1:15,0:12:59.59:100,0,60	1/1:8,0:8:0.87:2,1,0	1/1:7,3:12:3.27:99,3,0	0/1:11,0:10:30.89:51,0,31	1/1:12,0:9:4.82:31,5,0	0/0:5,0:6:4.14:0,4,40	0/1:10,0:7:27.17:27,0,52	0/0:4,0:4:3.41:0,3,19	./.	0/0:6,0:1:2.50:0,2,9	0/0:5,0:4:1.72:0,2,6	0/0:12,0:11:5.74:0,6,84	1/1:6,1:7:2.90:11,3,0	1/1:12,1:11:2.47:12,2,0	0/1:10,2:11:1.08:1,0,67	0/0:13,0:12:8.16:0,8,30	0/1:16,0:15:69.59:124,0,70	0/1:2,1:3:27.61:42,0,28	1/1:2,0:1:2.37:8,2,0
chr10	30663473	.	TC	T	550.54	PASS	AB=0.935;AC=17;AF=0.327;AN=52;BaseQRankSum=2.299;DP=244;FS=10.908;HRun=3;HaplotypeScore=67.1217;InbreedingCoeff=-0.0519;MQ=26.73;MQ0=29;MQRankSum=0.824;QD=3.75;ReadPosRankSum=3.946;VQSLOD=-0.6380;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:8:8.13:0,8,66	1/1:3,0:3:3.01:37,3,0	./.	./.	1/1:9,1:9:3.43:34,3,0	0/1:15,0:12:16.10:49,0,16	0/1:10,1:9:11.68:54,0,12	0/0:14,0:11:20.27:0,20,109	0/0:7,0:7:1.82:0,2,6	0/1:16,0:13:24.74:25,0,181	1/1:8,0:8:2.85:15,3,0	0/1:9,1:9:27.60:56,0,28	0/1:9,2:10:38.43:94,0,38	0/1:9,3:9:17.15:72,0,17	0/0:6,0:6:6.60:0,7,81	0/0:10,0:7:9.66:0,10,70	0/0:4,0:4:3.45:0,3,23	0/0:2,0:1:3.01:0,3,31	0/0:6,0:1:2.74:0,3,12	0/0:5,0:4:0.93:0,1,3	0/0:13,0:11:5.73:0,6,96	0/1:8,0:7:15.07:31,0,15	1/1:12,1:11:9.16:78,9,0	0/0:12,0:11:7.15:0,7,60	0/1:13,0:12:12.43:59,0,12	0/1:16,1:16:91.53:92,0,158	0/0:3,0:3:5.86:0,6,39	0/0:2,0:1:3:0,3,25
chr10	30663477	.	C	CT	406.53	PASS	AB=0.972;AC=18;AF=0.346;AN=52;BaseQRankSum=5.240;DP=266;FS=16.111;HRun=0;HaplotypeScore=78.9486;InbreedingCoeff=-0.0506;MQ=28.18;MQ0=34;MQRankSum=-2.839;QD=2.34;ReadPosRankSum=5.443;VQSLOD=0.8647;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:8:7.53:0,8,60	1/1:1,1:2:2.22:7,2,0	./.	./.	0/0:11,0:10:1:0,1,4	0/1:13,1:11:5.12:71,0,5	0/1:15,0:12:15.14:15,0,41	0/0:16,0:11:12.68:0,13,31	0/0:9,0:9:6.30:0,6,44	1/1:14,2:13:9.41:223,9,0	1/1:7,1:8:1.06:3,1,0	0/1:11,0:9:10:10,0,26	0/1:10,1:10:30.66:31,0,44	0/1:12,0:9:9.22:36,0,9	0/0:7,0:7:10.99:0,11,99	0/1:11,1:8:40.52:41,0,67	0/0:4,0:4:4.73:0,5,15	0/0:2,0:1:2.92:0,3,17	0/0:8,0:1:3.01:0,3,33	0/1:4,0:3:0.32:0,0,0	0/0:16,0:14:6.09:0,6,141	0/1:9,0:8:2.91:3,0,33	0/1:13,0:11:0.53:2,0,1	0/1:12,0:11:0.86:1,0,35	0/1:14,1:13:10.23:10,0,25	0/1:19,1:18:83.41:83,0,151	0/0:3,0:3:5.88:0,6,41	0/0:2,0:1:3.01:0,3,35
chr10	30663483	.	C	CT	215.66	PASS	AB=0.971;AC=14;AF=0.250;AN=56;BaseQRankSum=5.308;DP=321;FS=24.633;HRun=0;HaplotypeScore=89.2146;InbreedingCoeff=-0.0565;MQ=36.20;MQ0=36;MQRankSum=-5.720;QD=1.33;ReadPosRankSum=4.639;VQSLOD=-0.2568;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:9:12.42:0,12,113	1/1:4,0:4:1.76:5,2,0	0/0:6,0:3:5.85:0,6,44	0/0:8,0:4:5.22:0,5,33	0/1:10,1:10:4.28:4,0,19	0/1:17,0:14:16.30:44,0,16	0/0:18,0:16:10.58:0,11,256	0/0:16,0:11:7.79:0,8,18	0/0:9,1:9:12.40:0,12,153	0/1:20,0:17:70.92:71,0,137	0/0:6,0:6:0.15:0,0,1	0/1:15,0:13:14.90:15,0,132	0/1:13,0:12:6.90:7,0,76	0/1:11,2:10:29.80:83,0,30	0/0:8,0:8:6.74:0,7,110	0/1:12,1:9:31.58:32,0,97	0/0:5,0:6:8.85:0,9,45	0/0:7,0:6:12.02:0,12,140	0/0:12,0:5:8.95:0,9,86	0/1:5,0:4:0.21:0,0,0	0/0:18,0:15:16.76:0,17,190	0/0:12,0:10:10.43:0,10,123	1/1:14,1:13:2.80:13,3,0	0/0:14,0:13:6.82:0,7,86	0/1:15,0:13:20.69:21,0,56	0/1:21,0:19:55.63:56,0,247	0/0:3,0:3:4.25:0,4,33	0/0:4,0:3:5.99:0,6,57
chr10	30666258	.	A	AG	1897.42	PASS	AB=0.911;AC=36;AF=0.643;AN=56;BaseQRankSum=-1.857;DP=305;FS=32.566;HRun=1;HaplotypeScore=111.5984;InbreedingCoeff=-0.1086;MQ=59.98;MQ0=44;MQRankSum=-1.353;QD=8.87;ReadPosRankSum=-1.219;VQSLOD=-0.6960;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:7,4:11:8.81:168,0,9	0/0:2,2:4:5.19:0,5,26	0/0:36,1:12:28.83:0,29,270	0/0:50,0:13:2.93:0,3,149	0/1:9,2:8:24.94:38,0,25	0/1:7,1:5:10.75:11,0,20	0/1:6,3:7:10.05:102,0,10	1/1:8,1:5:14.85:128,15,0	1/1:3,1:3:2.93:51,3,0	1/1:11,1:11:11.82:151,12,0	0/1:4,0:4:1.64:2,0,4	0/1:2,0:2:0.61:1,0,5	0/1:4,0:3:10.63:14,0,11	1/1:6,3:8:11.92:200,12,0	1/1:4,0:4:8.35:67,8,0	1/1:5,0:5:8.27:83,8,0	1/1:5,2:6:1.36:90,1,0	1/1:5,1:4:4.44:74,4,0	1/1:10,2:8:12.26:139,12,0	0/1:11,1:10:31.45:74,0,31	1/1:8,6:10:3.48:44,3,0	0/1:15,1:15:10.91:101,0,11	0/1:7,2:9:16.64:36,0,17	0/1:10,2:8:7.04:119,0,7	0/1:9,0:8:19.77:70,0,20	0/1:9,0:7:6.82:71,0,7	0/1:6,0:5:31.46:40,0,31	1/1:9,1:8:8.70:178,9,0
chr10	30666421	.	AC	A	13564.71	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=2.311;DP=524;FS=24.673;HRun=3;HaplotypeScore=61.4105;InbreedingCoeff=0.9713;MQ=80.27;MQ0=0;MQRankSum=-6.488;QD=32.14;ReadPosRankSum=6.388;VQSLOD=2.8245;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,20:24:69.19:829,69,0	1/1:1,7:7:18.06:223,18,0	0/0:17,0:17:10.36:0,10,528	0/0:27,0:27:62.58:0,63,716	1/1:0,12:11:26.85:274,27,0	1/1:0,13:13:39.12:483,39,0	1/1:0,20:20:42.13:521,42,0	0/0:23,0:23:63.18:0,63,837	1/1:2,14:16:36.11:446,36,0	1/1:0,25:24:66.21:817,66,0	1/1:0,4:4:8.92:75,9,0	1/1:0,17:17:45.14:557,45,0	1/1:1,6:7:18.06:223,18,0	1/1:0,20:20:54.17:669,54,0	1/1:0,20:20:54.08:669,54,0	1/1:1,26:27:72.23:892,72,0	0/0:23,0:23:69.16:0,69,948	0/0:12,0:11:30.10:0,30,427	1/1:1,20:21:60.18:731,60,0	1/1:0,17:18:42.06:500,42,0	1/1:0,30:30:81.25:1004,81,0	1/1:1,19:20:51.16:630,51,0	1/1:0,15:15:36.06:428,36,0	1/1:2,22:24:72.18:862,72,0	1/1:0,9:9:24.08:297,24,0	1/1:0,17:17:51.14:617,51,0	1/1:0,20:20:48.15:594,48,0	1/1:0,35:34:99:1225,99,0
chr10	30666701	.	GA	G	2025.27	PASS	AB=0.715;AC=36;AF=0.667;AN=54;BaseQRankSum=-5.562;DP=344;FS=17.821;HRun=8;HaplotypeScore=86.2734;InbreedingCoeff=0.3984;MQ=42.24;MQ0=6;MQRankSum=-0.160;QD=7.82;ReadPosRankSum=4.467;VQSLOD=0.3488;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:8,6:13:7.73:68,0,8	1/1:4,3:6:1.71:64,2,0	0/0:2,0:1:3.01:0,3,31	./.	1/1:9,12:20:10.10:194,10,0	0/1:3,6:8:6.69:96,0,7	1/1:11,5:15:8.90:65,9,0	0/0:14,1:15:7.90:0,8,337	1/1:6,5:11:9.70:165,10,0	1/1:11,7:17:25.91:230,26,0	1/1:4,4:7:6.01:56,6,0	0/1:13,5:18:21.08:116,0,21	1/1:5,6:9:8.66:84,9,0	1/1:8,6:12:1.48:121,1,0	1/1:6,3:8:5.21:99,5,0	1/1:5,5:8:2.58:72,3,0	0/0:19,0:18:26.93:0,27,274	0/0:16,0:13:23.96:0,24,233	0/0:12,0:12:32.49:0,32,334	0/0:10,0:10:17.98:0,18,175	0/0:8,0:7:15.05:0,15,180	1/1:7,2:9:4.71:79,5,0	1/1:6,4:10:3.72:119,4,0	1/1:14,2:14:3.10:67,3,0	1/1:9,6:15:1.10:120,1,0	1/1:6,1:7:1.54:46,2,0	1/1:8,6:14:15.07:145,15,0	0/1:15,6:20:3.32:187,0,3
chr10	30666709	.	AGACCC	A	3146.27	PASS	AB=0.813;AC=20;AF=0.357;AN=56;BaseQRankSum=-9.296;DP=357;FS=48.279;HRun=0;HaplotypeScore=90.7112;InbreedingCoeff=-0.5658;MQ=46.48;MQ0=5;MQRankSum=1.391;QD=11.36;ReadPosRankSum=-3.018;VQSLOD=-0.3408;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:10,6:16:99:299,0,162	0/0:5,0:3:8.06:0,8,38	0/0:5,0:1:3.01:0,3,66	0/0:7,0:4:2.03:0,2,49	0/1:21,3:23:77.52:226,0,78	0/1:12,1:12:99:110,0,118	0/1:7,8:14:48.78:55,0,49	0/0:17,0:17:31.90:0,32,574	0/1:11,1:12:69.37:177,0,69	0/1:9,10:17:99:370,0,126	0/1:5,4:7:22.34:85,0,22	0/1:15,2:17:25.41:440,0,25	0/1:12,2:12:44.11:44,0,170	0/1:15,1:14:64:168,0,64	0/1:7,0:6:12.70:54,0,13	0/1:10,0:8:38.87:141,0,39	0/0:17,0:16:26.76:0,27,362	0/0:12,0:9:22.81:0,23,257	0/1:13,0:13:17.24:17,0,299	0/0:7,3:10:18.05:0,18,303	0/0:7,0:6:11.44:0,11,186	0/1:4,4:8:23.72:191,0,24	0/1:5,4:9:34.39:126,0,34	0/1:9,6:13:0.23:0,0,15	0/1:10,5:15:55.53:327,0,56	0/1:3,6:9:22.47:254,0,22	0/1:8,8:15:40.16:176,0,40	0/1:20,0:19:37.87:38,0,147
chr10	30666728	.	A	AAAAAAT	3554.64	PASS	AB=0.987;AC=25;AF=0.446;AN=56;BaseQRankSum=7.539;DP=386;FS=4.554;HRun=0;HaplotypeScore=123.5546;InbreedingCoeff=-0.4022;MQ=69.02;MQ0=6;MQRankSum=-6.368;QD=11.54;ReadPosRankSum=2.851;VQSLOD=2.6074;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:25:99:276,0,159	0/1:7,0:5:56.69:86,0,57	0/0:19,0:7:12.15:0,12,150	0/1:23,0:19:25.61:26,0,163	1/1:23,0:21:18.94:338,19,0	0/1:14,0:14:4.90:265,0,5	0/1:16,0:15:25.58:26,0,33	0/0:18,0:18:44.72:0,45,486	0/1:12,0:12:60.23:69,0,60	0/1:20,0:17:54.28:256,0,54	0/1:9,0:7:8.87:63,0,9	1/1:17,0:17:10.68:398,11,0	0/1:17,0:15:70.36:259,0,70	0/1:16,0:14:27.16:251,0,27	0/1:6,0:5:32.15:73,0,32	0/1:10,0:8:51.94:99,0,52	0/0:15,0:13:29.99:0,30,392	0/0:8,0:7:14.81:0,15,175	0/1:15,0:15:99:125,0,109	0/1:13,0:13:30.65:31,0,76	0/0:4,0:3:4:0,4,43	0/1:7,0:7:10.58:128,0,11	0/1:8,0:8:26.50:64,0,27	0/0:14,0:12:10.80:0,11,70	1/1:12,0:11:0.32:195,0,0	0/1:10,0:10:34.06:129,0,34	0/1:13,0:13:17.91:199,0,18	0/1:10,1:13:9.92:201,0,10
chr10	30672911	.	CAA	C	10184.05	PASS	AB=0.550;AC=39;AF=0.696;AN=56;BaseQRankSum=-2.338;DP=615;FS=1.760;HRun=12;HaplotypeScore=89.3558;InbreedingCoeff=0.8895;MQ=75.57;MQ0=4;MQRankSum=-2.483;QD=22.24;ReadPosRankSum=5.652;VQSLOD=4.6186;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,16:19:47.84:470,48,0	1/1:2,8:10:27.04:268,27,0	0/0:30,1:22:33.61:0,34,390	0/0:20,0:13:20.95:0,21,213	1/1:8,24:33:59.71:640,60,0	1/1:3,20:26:26.26:431,26,0	1/1:5,16:21:42.08:427,42,0	0/0:26,0:26:60.19:0,60,877	1/1:5,15:20:41.81:408,42,0	1/1:0,16:17:47.83:469,48,0	1/1:3,24:28:9.09:525,9,0	1/1:3,22:25:53.83:601,54,0	1/1:2,20:22:47.92:488,48,0	1/1:6,14:21:44.81:439,45,0	1/1:3,22:25:57.10:580,57,0	1/1:2,22:24:63.13:641,63,0	0/0:20,0:20:54.17:0,54,781	0/0:7,0:7:7.05:0,7,172	0/0:3,0:13:15.15:0,15,68	0/0:5,0:28:64.15:0,64,349	0/0:3,0:11:24:0,24,187	1/1:6,30:36:75.09:763,75,0	1/1:2,23:24:56.82:561,57,0	0/1:2,9:11:14.62:244,0,15	1/1:3,21:26:44.56:562,45,0	1/1:3,24:27:69.13:695,69,0	1/1:6,27:35:80.63:786,81,0	1/1:0,6:6:18.04:183,18,0
chr10	30673143	.	A	AG	27414.41	PASS	AB=0.727;AC=54;AF=0.964;AN=56;BaseQRankSum=-5.541;DP=699;FS=1.208;HRun=1;HaplotypeScore=69.4280;InbreedingCoeff=-0.0371;MQ=63.16;MQ0=0;MQRankSum=3.352;QD=39.22;ReadPosRankSum=4.438;VQSLOD=5.4449;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,41:42:99:1529,102,0	1/1:0,12:12:33.11:485,33,0	0/1:5,6:8:30.65:160,0,31	0/1:16,5:16:81.96:239,0,82	1/1:0,26:26:75.25:1124,75,0	1/1:0,34:34:87.29:1304,87,0	1/1:1,26:27:69.23:1034,69,0	1/1:2,33:35:80.92:1447,81,0	1/1:1,28:29:69.23:1033,69,0	1/1:1,26:27:78.25:1150,78,0	1/1:0,18:18:51.17:764,51,0	1/1:0,26:26:72.24:1079,72,0	1/1:0,12:12:36.12:540,36,0	1/1:2,24:26:66.22:989,66,0	1/1:0,20:20:47.96:719,48,0	1/1:0,18:18:51.17:764,51,0	1/1:0,33:33:90.30:1349,90,0	1/1:1,27:28:75.25:1124,75,0	1/1:1,22:23:42.51:952,43,0	1/1:0,32:32:90.30:1347,90,0	1/1:4,31:35:96.32:1433,96,0	1/1:0,35:35:99:1573,105,0	1/1:0,16:16:48.16:719,48,0	1/1:0,23:23:63.21:944,63,0	1/1:1,22:23:60.20:899,60,0	1/1:1,24:25:72.23:1052,72,0	1/1:0,31:31:81.27:1213,81,0	1/1:1,10:10:30.10:449,30,0
chr10	30674066	.	T	TAAA	13949.59	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-3.279;DP=538;FS=3.542;HRun=9;HaplotypeScore=88.8651;InbreedingCoeff=0.9584;MQ=61.08;MQ0=0;MQRankSum=-4.535;QD=37.50;ReadPosRankSum=-0.162;VQSLOD=4.6781;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,21:29:39.13:752,39,0	1/1:0,5:7:18.06:320,18,0	0/0:8,0:8:2.98:0,3,120	0/0:9,0:8:8.40:0,8,77	1/1:5,23:32:66.10:1109,66,0	1/1:1,9:11:24.08:473,24,0	1/1:4,11:15:36.09:672,36,0	0/0:26,0:26:60.13:0,60,747	1/1:0,9:9:27.09:513,27,0	1/1:4,13:18:42.12:767,42,0	1/1:5,11:18:42.10:631,42,0	1/1:6,20:27:48.15:870,48,0	1/1:4,14:20:39.08:715,39,0	1/1:2,14:19:45.11:815,45,0	0/0:30,0:30:72.18:0,72,895	1/1:6,13:21:42.11:736,42,0	0/0:22,0:23:44.42:0,44,527	0/0:18,0:18:45.11:0,45,554	0/0:10,0:10:27.07:0,27,329	0/0:18,0:19:54.08:0,54,636	0/0:21,0:22:54.30:0,54,701	1/1:1,12:14:36.10:610,36,0	1/1:4,14:19:38.62:650,39,0	1/1:2,7:11:18.02:283,18,0	1/1:1,18:24:54.12:922,54,0	1/1:4,26:32:81.24:1468,81,0	1/1:3,24:27:54.19:1065,54,0	1/1:2,15:19:33.07:578,33,0
chr10	30674674	.	TA	T	977.94	PASS	AB=0.923;AC=7;AF=0.125;AN=56;BaseQRankSum=8.061;DP=584;FS=5.731;HRun=10;HaplotypeScore=58.7017;InbreedingCoeff=0.7825;MQ=76.64;MQ0=0;MQRankSum=0.033;QD=14.17;ReadPosRankSum=-1.473;VQSLOD=3.3045;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:29:79.86:0,80,774	0/0:8,0:8:24.06:0,24,265	0/0:19,1:20:6.33:0,6,322	0/1:11,1:12:7.71:8,0,103	0/0:30,0:30:84.20:0,84,913	0/0:23,2:25:14.05:0,14,596	0/0:21,0:21:54.09:0,54,583	0/0:42,0:43:89.30:0,89,1023	0/0:20,1:21:31.10:0,31,556	0/0:32,0:32:87.23:0,87,956	0/0:20,1:21:28.06:0,28,518	0/0:16,1:17:10.10:0,10,332	0/0:13,0:13:36.02:0,36,375	0/0:17,0:17:48.07:0,48,509	0/0:6,0:24:42.95:0,43,251	0/0:16,0:16:33.08:0,33,357	0/0:23,0:23:58.19:0,58,690	0/0:17,0:17:48.07:0,48,509	1/1:2,12:14:35.96:309,36,0	1/1:6,17:23:44.98:391,45,0	1/1:2,18:20:47.98:417,48,0	0/0:17,1:18:19.01:0,19,416	0/0:12,1:13:6.07:0,6,279	0/0:25,0:25:72.15:0,72,783	0/0:19,1:21:24.87:0,25,485	0/0:21,0:21:46.21:0,46,609	0/0:28,2:29:35.09:0,35,819	0/0:10,0:10:24.05:0,24,256
chr10	30675670	.	A	AC	4710.57	PASS	AB=0.629;AC=40;AF=0.714;AN=56;BaseQRankSum=-3.252;DP=406;FS=5.996;HRun=8;HaplotypeScore=47.1036;InbreedingCoeff=0.6195;MQ=88.28;MQ0=2;MQRankSum=-4.244;QD=17.78;ReadPosRankSum=0.437;VQSLOD=4.3308;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,15:18:33.10:378,33,0	1/1:0,2:2:6.02:69,6,0	0/0:33,0:32:71.85:0,72,630	0/0:20,0:20:17.40:0,17,308	1/1:0,10:10:18.05:208,18,0	1/1:5,9:13:9.03:104,9,0	1/1:6,12:17:16.14:205,16,0	0/0:20,0:18:41.97:0,42,374	0/1:5,9:14:34.03:152,0,34	1/1:3,9:12:33.04:357,33,0	0/1:5,9:13:12.41:123,0,12	1/1:1,14:15:18.05:208,18,0	1/1:8,3:11:30.04:314,30,0	1/1:5,9:13:33.10:380,33,0	0/0:25,0:25:66.02:0,66,603	0/1:2,9:11:6.21:187,0,6	0/0:31,0:31:78:0,78,707	0/0:12,0:12:20.99:0,21,192	1/1:0,0:4:3.31:16,3,0	1/1:2,0:5:8.77:54,9,0	1/1:7,1:17:11.56:78,12,0	1/1:10,10:19:42.08:456,42,0	1/1:1,15:16:36.11:415,36,0	1/1:3,9:12:24.07:277,24,0	1/1:3,14:17:24.07:277,24,0	1/1:3,4:7:15.04:165,15,0	0/1:8,4:11:0.57:220,0,1	1/1:0,2:2:6.02:69,6,0
chr10	30676443	.	TCC	T	1904.73	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=3.132;DP=510;FS=6.842;HRun=10;HaplotypeScore=83.0658;InbreedingCoeff=0.9961;MQ=84.17;MQ0=1;MQRankSum=-1.937;QD=18.67;ReadPosRankSum=3.749;VQSLOD=2.4907;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:36.11:0,36,550	0/0:14,0:14:36.10:0,36,510	0/0:24,0:23:60.14:0,60,849	0/0:24,0:23:21.20:0,21,509	0/0:19,0:19:54.13:0,54,764	0/0:18,0:18:42.13:0,42,644	0/0:15,0:17:50.13:0,50,706	0/0:21,0:23:47:0,47,519	0/0:18,0:18:39.11:0,39,575	0/0:17,0:20:47.11:0,47,640	0/0:11,0:11:24.04:0,24,296	0/0:13,0:13:39.09:0,39,532	0/0:27,0:27:72.19:0,72,1053	0/0:12,0:13:38.60:0,39,539	1/1:1,0:27:52.13:166,52,0	0/0:18,0:19:50.63:0,51,727	0/0:18,0:20:53.60:0,54,746	0/0:8,0:8:24.08:0,24,381	1/1:4,15:19:44.69:462,45,0	1/1:6,23:29:57.11:635,57,0	1/1:2,25:27:72.18:802,72,0	0/0:17,0:17:42.10:0,42,579	0/0:12,0:14:32.08:0,32,436	0/0:13,0:12:33.11:0,33,524	0/0:17,0:20:41.61:0,42,585	0/0:9,0:10:20.51:0,21,207	0/0:17,0:17:50.66:0,51,769	0/0:12,0:12:33.08:0,33,475
chr10	30678687	.	AACATACATACAT	A	10727.76	PASS	AC=38;AF=0.731;AN=52;BaseQRankSum=8.219;DP=731;FS=0.455;HRun=0;HaplotypeScore=229.7483;InbreedingCoeff=0.9098;MQ=53.22;MQ0=12;MQRankSum=-6.909;QD=21.76;ReadPosRankSum=-3.067;VQSLOD=3.1055;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:18,18:36:14.84:100,15,0	1/1:10,11:21:23.91:489,24,0	./.	./.	1/1:13,26:39:57.59:933,58,0	1/1:4,24:28:20.86:306,21,0	1/1:20,0:20:20.57:356,21,0	0/0:43,0:40:42.05:0,42,608	1/1:8,14:22:14.96:345,15,0	1/1:15,24:39:66.13:1699,66,0	1/1:9,18:26:29.84:532,30,0	1/1:7,12:19:12:329,12,0	1/1:10,14:24:17.98:452,18,0	1/1:10,13:23:23.87:409,24,0	0/0:23,0:43:45.14:0,45,867	1/1:12,18:30:29.92:778,30,0	0/0:26,0:26:42.14:0,42,2028	0/0:29,0:28:60.21:0,60,2596	0/0:22,0:20:9.03:0,9,316	0/0:28,0:28:60.21:0,60,2938	0/0:23,0:23:54.18:0,54,2130	1/1:12,21:33:35.78:648,36,0	1/1:8,12:20:21.46:551,21,0	1/1:8,8:17:2.93:20,3,0	1/1:7,20:27:32.90:718,33,0	1/1:14,13:28:48.05:921,48,0	1/1:9,22:31:33.07:1040,33,0	1/1:2,7:9:3.01:103,3,0
chr10	30679600	.	ATC	A	14682.15	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=3.576;DP=729;FS=0.000;HRun=0;HaplotypeScore=99.8899;InbreedingCoeff=0.9968;MQ=90.91;MQ0=0;MQRankSum=-4.448;QD=30.98;ReadPosRankSum=7.107;VQSLOD=6.3781;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,29:34:81.09:1007,81,0	1/1:4,7:11:21.07:267,21,0	0/0:29,0:29:68.38:0,68,1230	0/0:38,0:37:72.97:0,73,1157	1/1:1,35:36:96.31:1218,96,0	1/1:5,34:39:99:1261,99,0	1/1:2,21:23:51.16:650,51,0	0/0:40,0:40:96.31:0,96,1559	1/1:1,19:20:54.17:687,54,0	1/1:1,36:37:99:1318,105,0	1/1:1,16:17:45.14:573,45,0	1/1:1,29:30:72.23:917,72,0	1/1:5,13:18:33.11:420,33,0	1/1:0,24:24:66.21:840,66,0	0/0:32,0:32:78.24:0,78,1251	1/1:6,24:30:63.19:789,63,0	0/0:25,0:25:69.24:0,69,1139	0/0:13,0:13:36.10:0,36,564	0/0:10,0:24:57:0,57,524	0/0:2,0:20:42.03:0,42,385	0/0:11,0:34:69.03:0,69,610	1/1:2,14:16:39.12:497,39,0	1/1:5,20:25:54.17:688,54,0	1/1:1,23:24:54.17:688,54,0	1/1:1,21:22:57.18:726,57,0	1/1:2,30:32:90.29:1145,90,0	1/1:3,24:27:63.20:802,63,0	1/1:0,9:9:15.05:191,15,0
chr10	30680104	.	CA	C	16454.09	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=14.474;DP=714;FS=0.000;HRun=3;HaplotypeScore=70.6564;InbreedingCoeff=0.9992;MQ=86.53;MQ0=0;MQRankSum=-4.660;QD=34.49;ReadPosRankSum=6.348;VQSLOD=4.7341;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,43:43:99:1487,120,0	1/1:0,11:11:27.06:320,27,0	0/0:29,0:29:81.23:0,81,1093	0/0:21,0:21:50.76:0,51,734	1/1:0,31:31:93.29:1152,93,0	1/1:0,22:22:66.21:818,66,0	1/1:0,26:26:72.23:893,72,0	0/0:34,0:33:96.31:0,96,1351	1/1:0,33:33:93.29:1152,93,0	1/1:0,25:25:75.21:913,75,0	1/1:0,20:20:57.18:703,57,0	1/1:0,21:21:63.20:781,63,0	1/1:1,27:28:75.24:930,75,0	1/1:0,24:24:63.20:781,63,0	0/0:33,0:33:93.29:0,93,1302	1/1:3,38:41:99:1338,108,0	0/0:31,0:31:93.27:0,93,1296	0/0:24,0:24:66.22:0,66,950	0/0:19,0:19:57.19:0,57,820	0/0:22,0:22:63.20:0,63,878	0/0:24,0:24:72.24:0,72,1035	1/1:2,19:21:57.18:707,57,0	1/1:0,25:25:75.24:930,75,0	1/1:0,21:21:60.19:744,60,0	1/1:0,14:14:42.13:520,42,0	1/1:1,37:38:99:1322,111,0	1/1:2,24:26:57.05:704,57,0	1/1:0,7:7:21.07:260,21,0
chr10	30680447	.	GT	G	7766.87	PASS	AB=0.733;AC=40;AF=0.714;AN=56;BaseQRankSum=10.759;DP=535;FS=10.923;HRun=10;HaplotypeScore=73.1198;InbreedingCoeff=0.8436;MQ=70.68;MQ0=0;MQRankSum=-0.897;QD=20.71;ReadPosRankSum=4.222;VQSLOD=5.2581;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,14:20:11.72:331,12,0	1/1:0,8:8:24:208,24,0	0/1:10,1:11:24.59:25,0,85	0/0:9,0:9:21.04:0,21,223	1/1:1,15:16:38.97:338,39,0	1/1:0,17:17:44.99:391,45,0	1/1:4,15:19:41.97:364,42,0	0/0:40,0:39:96.73:0,97,1062	1/1:0,11:11:29.99:260,30,0	1/1:4,21:25:65.98:572,66,0	1/1:4,23:27:65.97:573,66,0	1/1:1,20:21:56.99:495,57,0	1/1:2,20:22:53.99:469,54,0	1/1:2,12:14:35.99:312,36,0	1/1:2,17:19:38.99:339,39,0	1/1:1,19:20:50.99:443,51,0	0/0:28,0:28:75.16:0,75,816	0/0:29,0:29:81.12:0,81,858	0/0:16,0:17:26.91:0,27,279	0/0:28,0:28:75.20:0,75,830	0/0:9,0:9:24.06:0,24,265	1/1:1,8:9:20.99:182,21,0	1/1:2,18:20:41.84:364,42,0	0/1:2,9:11:3.19:204,0,3	1/1:1,22:23:59.98:521,60,0	1/1:3,19:22:56.96:491,57,0	1/1:2,30:32:80.98:703,81,0	1/1:1,7:8:21:182,21,0
chr10	30681403	.	T	TG	798.95	PASS	AB=1.000;AC=30;AF=0.714;AN=42;BaseQRankSum=0.565;DP=102;FS=11.610;HRun=1;HaplotypeScore=18.1370;InbreedingCoeff=0.3737;MQ=54.13;MQ0=0;MQRankSum=4.075;QD=13.10;ReadPosRankSum=-1.249;VQSLOD=0.3646;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	1/1:2,0:2:5.99:49,6,0	0/0:4,0:2:3.83:0,4,20	0/0:5,0:3:2.97:0,3,20	0/1:4,0:4:2.67:18,0,3	0/0:2,0:2:1.25:0,1,3	1/1:2,0:2:2.97:20,3,0	1/1:4,0:3:6:54,6,0	1/1:0,1:1:2.99:23,3,0	1/1:7,0:7:18:163,18,0	./.	./.	./.	1/1:2,1:3:8.97:70,9,0	1/1:3,0:3:5.99:65,6,0	./.	0/0:12,0:12:19.71:0,20,190	0/0:6,0:6:8.93:0,9,68	0/1:10,0:9:1.15:76,0,1	1/1:8,2:10:1.04:160,1,0	1/1:2,1:3:5.97:48,6,0	1/1:1,0:1:2.99:24,3,0	1/1:2,0:2:2.99:24,3,0	./.	1/1:5,0:5:8.98:73,9,0	1/1:1,0:1:2.90:16,3,0	1/1:3,0:3:5.94:42,6,0	./.
chr10	30681716	.	CAAGGAAGG	C	1043.76	PASS	AC=6;AF=0.115;AN=52;BaseQRankSum=3.804;DP=633;FS=0.000;HRun=0;HaplotypeScore=159.6077;InbreedingCoeff=0.8461;MQ=72.04;MQ0=5;MQRankSum=-0.616;QD=13.73;ReadPosRankSum=1.528;VQSLOD=2.2363;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:30:29.95:0,30,254	0/0:6,0:6:9.03:0,9,346	./.	./.	0/0:25,0:25:30.09:0,30,901	0/0:23,0:25:45.09:0,45,1220	0/0:20,0:20:27.08:0,27,828	0/0:16,0:16:3.01:0,3,40	0/0:20,0:19:36.08:0,36,1161	0/0:38,0:42:60.12:0,60,1799	0/0:20,0:20:33.10:0,33,1146	0/0:22,0:22:27.09:0,27,979	0/0:32,0:32:63.18:0,63,2250	0/0:26,0:26:54.17:0,54,1825	0/0:9,0:15:18.05:0,18,467	0/0:21,0:21:45.11:0,45,1681	0/0:44,0:43:45.14:0,45,1538	0/0:18,0:18:27.02:0,27,757	1/1:20,7:24:21.05:400,21,0	1/1:16,11:27:24.01:486,24,0	1/1:22,0:22:15.04:294,15,0	0/0:26,0:26:45.15:0,45,1725	0/0:19,0:19:39.08:0,39,1274	0/0:25,0:26:27.03:0,27,859	0/0:10,0:14:12.04:0,12,394	0/0:20,0:19:21.05:0,21,663	0/0:25,0:25:42.07:0,42,1361	0/0:2,0:2:3.01:0,3,73
chr10	30684281	.	TCACACACACACACACACACA	T	7516.48	PASS	AB=0.875;AC=35;AF=0.673;AN=52;BaseQRankSum=7.149;DP=528;FS=0.000;HRun=0;HaplotypeScore=255.9837;InbreedingCoeff=0.3707;MQ=57.39;MQ0=7;MQRankSum=-2.479;QD=19.52;ReadPosRankSum=0.894;VQSLOD=3.1533;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:24,1:21:11.91:12,0,32	1/1:8,0:8:3.01:53,3,0	./.	0/0:33,0:23:0.47:0,0,1	0/1:15,0:22:0:0,0,0	1/1:13,6:19:6.02:318,6,0	1/1:18,0:18:3.48:51,3,0	0/0:22,0:22:21.06:0,21,465	1/1:9,10:19:18.06:939,18,0	0/1:17,4:21:1.15:281,0,1	1/1:7,5:12:8.65:50,9,0	1/1:16,11:26:18.06:792,18,0	1/1:14,0:21:15.05:648,15,0	1/1:9,5:13:3.01:159,3,0	1/1:11,1:17:0.07:516,0,0	1/1:15,9:25:21.53:1040,22,0	0/0:17,0:26:23.92:0,24,1432	0/0:11,0:15:29.13:0,29,1554	0/0:13,0:13:0.89:0,1,2	0/1:12,0:15:34.18:34,0,141	0/1:19,0:18:21.07:21,0,74	1/1:11,10:21:12.07:186,12,0	1/1:17,4:23:8.75:261,9,0	0/0:17,0:16:0.61:0,1,45	1/1:8,8:16:14.78:508,15,0	1/1:10,7:18:15.04:657,15,0	1/1:14,10:24:20.69:990,21,0	./.
chr10	30684322	.	CACACACACACACACAA	C	4247.63	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=9.917;DP=503;FS=22.875;HRun=0;HaplotypeScore=209.1918;InbreedingCoeff=-0.2479;MQ=48.54;MQ0=25;MQRankSum=-6.864;QD=13.53;ReadPosRankSum=7.510;VQSLOD=1.5494;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:19:30.15:0,30,262	0/0:8,0:8:21.40:0,21,176	0/0:11,0:3:9.01:0,9,86	0/0:7,0:5:14.59:0,15,119	0/0:24,0:24:30.55:0,31,317	0/1:18,0:18:99:157,0,249	0/0:12,0:10:17.29:0,17,167	0/0:19,0:17:41.39:0,41,527	0/1:17,0:16:84.84:504,0,85	0/1:19,0:19:57.82:58,0,369	0/0:17,0:15:23.26:0,23,163	0/1:20,0:18:99:404,0,150	0/1:21,0:21:99:357,0,278	0/1:10,0:9:80.96:81,0,88	0/1:21,0:21:99:389,0,266	0/1:21,0:19:99:588,0,188	0/0:31,0:30:66.11:0,66,2468	0/0:21,0:20:53.77:0,54,1685	0/1:14,0:14:45.49:108,0,45	1/1:5,10:15:2.53:133,3,0	1/1:29,0:24:12.41:241,12,0	0/1:23,0:21:45.01:45,0,178	0/1:21,0:21:84.81:85,0,258	0/0:14,0:13:13.80:0,14,108	0/1:15,0:15:99:256,0,106	0/1:27,0:24:99:319,0,416	0/1:19,0:18:99:511,0,154	0/1:4,0:4:10.97:11,0,64
chr10	30684338	.	AAG	A	854.95	PASS	AB=0.576;AC=5;AF=0.089;AN=56;BaseQRankSum=2.075;DP=597;FS=0.661;HRun=0;HaplotypeScore=135.6814;InbreedingCoeff=0.7547;MQ=55.79;MQ0=20;MQRankSum=4.505;QD=14.02;ReadPosRankSum=-1.961;VQSLOD=2.8601;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:24:7.48:0,7,575	0/0:9,0:9:21.54:0,22,325	0/0:25,0:13:26.87:0,27,445	0/0:13,0:10:18.95:0,19,281	0/0:28,1:29:25.76:0,26,813	0/0:22,0:22:13.39:0,13,638	0/0:19,0:17:10.82:0,11,636	0/0:20,0:19:42.02:0,42,593	0/0:22,0:21:48.06:0,48,607	0/0:23,0:23:63.15:0,63,929	0/0:18,0:16:30.10:0,30,408	0/0:19,0:18:41.95:0,42,520	0/0:26,0:26:30.02:0,30,846	0/0:12,0:11:24.01:0,24,337	0/0:25,0:25:69.03:0,69,929	0/0:28,0:26:71.71:0,72,931	0/0:34,0:33:77.74:0,78,1068	0/0:20,0:19:39.88:0,40,554	0/1:5,14:19:6.43:415,0,6	1/1:14,0:14:14.90:119,15,0	1/1:28,0:24:23.45:448,23,0	0/0:29,0:27:45.14:0,45,669	0/0:24,0:24:53.91:0,54,803	0/0:16,0:15:20.99:0,21,315	0/0:17,0:17:29.88:0,30,392	0/0:30,0:28:68.97:0,69,905	0/0:23,0:22:52.58:0,53,648	0/0:5,0:5:12.04:0,12,184
chr10	30684524	.	G	GA	163.18	PASS	AB=0.882;AC=3;AF=0.054;AN=56;BaseQRankSum=-3.346;DP=503;FS=0.000;HRun=10;HaplotypeScore=59.3944;InbreedingCoeff=0.6330;MQ=78.25;MQ0=2;MQRankSum=0.255;QD=4.94;ReadPosRankSum=0.658;VQSLOD=0.3861;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:30:63.62:0,64,475	0/0:9,0:9:20.90:0,21,163	0/0:20,0:16:19.27:0,19,151	0/0:16,0:13:14.35:0,14,100	0/1:13,2:15:2.05:2,0,189	0/0:19,0:19:35.85:0,36,285	0/0:17,0:17:41.93:0,42,345	0/0:37,0:37:45.83:0,46,571	0/0:15,0:15:38.91:0,39,314	0/0:18,0:18:38.93:0,39,318	0/0:11,0:11:14.95:0,15,123	0/0:15,0:15:32.88:0,33,261	0/0:14,0:14:26.90:0,27,215	0/0:22,0:22:46.89:0,47,369	1/1:6,12:18:24.06:256,24,0	0/0:16,0:16:38.90:0,39,314	0/0:22,0:22:53.85:0,54,436	0/0:11,0:11:26.97:0,27,222	0/0:16,0:16:37.75:0,38,296	0/0:20,0:20:41.74:0,42,334	0/0:16,0:16:38.87:0,39,309	0/0:16,0:16:35.93:0,36,295	0/0:16,0:16:38.71:0,39,307	0/0:35,0:35:89.68:0,90,714	0/0:14,0:14:20.93:0,21,170	0/0:21,0:21:40.88:0,41,317	0/0:19,0:20:21.24:0,21,325	0/0:1,0:1:3:0,3,25
chr10	30684942	.	AAAGGAAGGAAGGAAGG	A	1598.43	PASS	AC=2;AF=0.038;AN=52;BaseQRankSum=2.707;DP=667;FS=15.710;HRun=0;HaplotypeScore=273.7754;InbreedingCoeff=0.8336;MQ=65.70;MQ0=9;MQRankSum=-5.174;QD=38.99;ReadPosRankSum=0.511;VQSLOD=1.3030;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:21:21.05:0,21,892	0/0:10,0:10:12.04:0,12,655	./.	./.	0/0:27,0:27:36.12:0,36,1438	0/0:16,0:23:33.11:0,33,1496	0/0:24,0:24:36.12:0,36,1600	0/0:20,0:20:6.02:0,6,119	0/0:9,0:12:15.05:0,15,718	0/0:27,0:27:36.12:0,36,2119	0/0:16,0:16:21.07:0,21,1383	0/0:24,0:24:36.12:0,36,1580	0/0:27,0:34:36.12:0,36,1357	0/0:10,0:16:18.03:0,18,505	1/1:13,28:41:35.60:1692,36,0	0/0:14,0:24:42.13:0,42,1881	0/0:20,0:35:52.98:0,53,1988	0/0:24,0:29:42.14:0,42,2751	0/0:21,0:20:18.06:0,18,1103	0/0:17,0:17:24.95:0,25,1188	0/0:32,0:39:48.11:0,48,2943	0/0:16,0:15:26.21:0,26,920	0/0:23,0:31:33.93:0,34,1103	0/0:35,0:35:51.12:0,51,2019	0/0:17,0:17:18.95:0,19,1014	0/0:26,0:26:27.08:0,27,1198	0/0:17,0:17:18.06:0,18,891	0/0:11,0:10:24.04:0,24,1104
chr10	30687843	.	T	TC	8300.80	PASS	AB=0.579;AC=43;AF=0.768;AN=56;BaseQRankSum=-6.676;DP=548;FS=52.976;HRun=9;HaplotypeScore=62.6099;InbreedingCoeff=0.6122;MQ=88.24;MQ0=0;MQRankSum=-3.159;QD=18.65;ReadPosRankSum=1.620;VQSLOD=1.5713;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,15:23:16.04:397,16,0	0/1:4,6:10:8.01:148,0,8	0/0:18,0:18:26.76:0,27,258	0/0:26,0:26:16.06:0,16,347	1/1:7,27:34:5.05:512,5,0	1/1:4,11:15:4.03:273,4,0	1/1:5,18:23:36.57:399,37,0	0/0:20,0:20:35.96:0,36,310	1/1:3,17:20:41.96:464,42,0	1/1:2,15:17:42.11:463,42,0	1/1:4,14:19:39.36:413,39,0	1/1:3,18:21:16.07:405,16,0	0/1:3,17:20:12.99:326,0,13	1/1:5,14:19:26.90:299,27,0	1/1:5,25:30:60.16:664,60,0	1/1:2,10:12:27.07:299,27,0	0/0:27,0:27:62.96:0,63,547	0/0:12,0:12:32.98:0,33,286	1/1:9,8:18:6.86:286,7,0	1/1:4,11:15:1.02:239,1,0	1/1:2,11:14:21.06:232,21,0	1/1:8,13:21:33.09:363,33,0	1/1:3,12:15:30.08:332,30,0	1/1:8,23:31:34.11:605,34,0	1/1:11,16:27:22.03:453,22,0	1/1:5,10:15:27.03:276,27,0	1/1:6,12:18:7.03:306,7,0	0/1:2,6:8:8.01:148,0,8
chr10	30688884	.	T	TGAGAGA	4988.02	PASS	AC=46;AF=0.852;AN=54;BaseQRankSum=2.337;DP=407;FS=11.218;HRun=0;HaplotypeScore=109.0934;InbreedingCoeff=0.5552;MQ=55.79;MQ0=15;MQRankSum=-1.933;QD=16.57;ReadPosRankSum=-0.404;VQSLOD=3.5688;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:13:12.04:231,12,0	1/1:3,2:5:3.01:98,3,0	./.	0/0:31,0:13:0.31:0,0,1	1/1:12,0:11:5.97:124,6,0	1/1:23,0:22:18.06:359,18,0	1/1:9,0:9:2.90:98,3,0	0/0:17,0:17:9.03:0,9,178	1/1:11,0:11:3.01:78,3,0	1/1:14,0:14:15.02:266,15,0	1/1:14,0:14:24.08:538,24,0	1/1:9,0:9:2.96:52,3,0	1/1:16,0:14:12.04:255,12,0	1/1:17,0:17:15.05:303,15,0	1/1:8,7:17:3:98,3,0	1/1:5,0:12:6.02:157,6,0	0/0:15,0:14:30.10:0,30,587	0/0:12,0:14:27.09:0,27,516	1/1:15,0:11:15.05:258,15,0	1/1:12,0:10:18.06:370,18,0	1/1:15,0:13:6.01:100,6,0	1/1:15,0:14:24.07:348,24,0	1/1:7,5:13:6.02:176,6,0	1/1:4,6:11:3.01:39,3,0	1/1:10,0:11:15.05:317,15,0	1/1:12,0:11:24.07:293,24,0	1/1:7,0:7:9.03:194,9,0	1/1:16,0:12:18.05:238,18,0
chr10	30689523	.	C	CAT	2392.69	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-9.369;DP=625;FS=0.517;HRun=0;HaplotypeScore=73.1126;InbreedingCoeff=0.9856;MQ=68.67;MQ0=0;MQRankSum=-0.027;QD=34.18;ReadPosRankSum=-1.694;VQSLOD=5.3172;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:78.18:0,78,939	0/0:12,0:12:36.08:0,36,426	0/0:9,0:9:18.05:0,18,210	0/0:11,0:11:12.03:0,12,144	0/0:31,0:31:78.19:0,78,983	0/0:25,0:25:69.22:0,69,870	0/0:24,0:24:45.14:0,45,567	0/0:27,0:27:47.22:0,47,776	0/0:19,0:19:45.09:0,45,567	0/0:25,0:25:57:0,57,675	0/0:29,0:29:78.20:0,78,962	0/0:28,0:28:69.22:0,69,870	0/0:20,0:20:48.13:0,48,590	0/0:17,0:17:45.12:0,45,542	0/0:28,0:28:75.23:0,75,933	0/0:25,0:25:66.17:0,66,783	0/0:17,0:17:39.06:0,39,448	0/0:21,0:21:60.14:0,60,737	1/1:6,18:27:31.31:929,31,0	1/1:5,27:32:67.15:1157,67,0	1/1:1,10:11:27.09:449,27,0	0/0:15,0:15:39.10:0,39,459	0/0:20,0:20:54.14:0,54,643	0/0:18,0:18:45.08:0,45,535	0/0:26,0:25:63.19:0,63,780	0/0:33,0:33:90.29:0,90,1135	0/0:28,0:28:63.20:0,63,794	0/0:12,0:12:36.12:0,36,454
chr10	30690990	.	ATATATATATATATATGTATATG	A	3074.98	PASS	AB=0.892;AC=25;AF=0.595;AN=42;BaseQRankSum=6.212;DP=195;FS=0.000;HRun=0;HaplotypeScore=105.6123;InbreedingCoeff=0.3975;MQ=67.93;MQ0=1;MQRankSum=-4.860;QD=32.71;ReadPosRankSum=3.407;VQSLOD=1.9741;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:3,1:4:11.82:171,0,12	1/1:1,1:2:3.01:177,3,0	./.	0/0:11,0:6:2.28:0,2,9	1/1:9,0:9:3.01:116,3,0	1/1:11,2:13:18.06:817,18,0	./.	0/0:26,0:26:63.19:0,63,3885	./.	1/1:7,1:8:6.79:319,7,0	1/1:7,0:7:3.01:116,3,0	1/1:9,0:9:3.01:116,3,0	1/1:6,0:6:3.01:116,3,0	./.	1/1:9,0:9:6.02:307,6,0	0/1:3,0:3:12.41:19,0,12	0/0:11,0:11:27.09:0,27,2206	0/0:19,0:19:39.13:0,39,3321	0/0:9,0:9:21.07:0,21,1313	0/0:3,0:3:3.01:0,3,56	0/0:3,0:3:3.01:0,3,236	./.	./.	./.	1/1:5,1:6:6.02:253,6,0	1/1:7,0:7:9.01:170,9,0	1/1:3,1:4:6.02:292,6,0	0/1:6,1:7:4.57:233,0,5
chr10	30690992	.	ATATATATATATATGTATATG	A	3701.92	PASS	AC=28;AF=0.636;AN=44;BaseQRankSum=5.672;DP=189;FS=0.819;HRun=0;HaplotypeScore=92.6810;InbreedingCoeff=0.5990;MQ=68.06;MQ0=2;MQRankSum=-4.706;QD=41.59;ReadPosRankSum=2.992;VQSLOD=2.3665;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:4:6.01:166,6,0	1/1:2,0:2:3.01:141,3,0	0/0:6,0:5:3.01:0,3,85	0/0:14,0:6:2.54:0,3,9	1/1:2,7:9:3.01:163,3,0	1/1:3,10:13:18.06:935,18,0	./.	0/0:26,0:26:63.16:0,63,3449	./.	1/1:4,4:8:12:393,12,0	1/1:2,4:6:3.01:163,3,0	1/1:1,6:7:3.01:163,3,0	1/1:1,4:5:3.01:163,3,0	./.	1/1:9,0:9:6.02:279,6,0	1/1:3,0:3:5.99:50,6,0	0/0:11,0:11:27.08:0,27,1970	0/0:19,0:19:42.14:0,42,3209	0/0:7,0:7:20.28:0,20,1154	0/0:3,0:3:2.92:0,3,17	0/0:3,0:3:3.01:0,3,210	./.	./.	./.	1/1:7,0:7:6.02:244,6,0	1/1:1,4:5:9.02:259,9,0	1/1:3,1:4:6.02:304,6,0	1/1:7,0:7:17.94:278,18,0
chr10	30690994	.	ATATATATATATGTATATG	A	3022.18	PASS	AB=1.000;AC=29;AF=0.659;AN=44;BaseQRankSum=5.879;DP=186;FS=1.753;HRun=0;HaplotypeScore=84.7261;InbreedingCoeff=0.4969;MQ=65.61;MQ0=3;MQRankSum=-4.914;QD=32.85;ReadPosRankSum=2.590;VQSLOD=2.1288;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:4:6.01:152,6,0	1/1:1,0:1:3.01:127,3,0	0/0:5,0:4:3.01:0,3,79	0/0:16,0:6:2.28:0,2,9	1/1:9,0:9:3.01:128,3,0	1/1:13,0:13:18.06:767,18,0	./.	0/0:28,0:28:69.18:0,69,3488	./.	1/1:7,0:7:12.02:324,12,0	1/1:5,0:5:3.01:128,3,0	1/1:6,0:6:3.01:128,3,0	1/1:5,0:5:3.01:128,3,0	./.	1/1:9,0:9:6.02:252,6,0	1/1:3,0:3:5.99:50,6,0	0/0:11,0:11:30.09:0,30,1995	0/0:18,0:18:42.14:0,42,2884	0/1:7,0:7:13.70:14,0,989	0/0:3,0:3:2.92:0,3,17	0/0:3,0:3:3.01:0,3,185	./.	./.	./.	1/1:2,6:8:6.02:277,6,0	1/1:5,0:5:9.02:200,9,0	1/1:3,0:3:6.02:255,6,0	1/1:7,0:7:17.92:240,18,0
chr10	30691010	.	ATG	A	782.70	PASS	AC=36;AF=0.750;AN=48;BaseQRankSum=7.657;DP=171;FS=8.088;HRun=0;HaplotypeScore=48.2135;InbreedingCoeff=0.4432;MQ=66.20;MQ0=3;MQRankSum=-2.535;QD=8.89;ReadPosRankSum=1.045;VQSLOD=1.6645;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:4:2.88:15,3,0	1/1:1,0:1:2.88:15,3,0	0/0:5,0:3:0.89:0,1,2	0/0:17,0:7:0:0,0,0	1/1:7,0:7:2.88:15,3,0	1/1:12,0:12:17.25:89,17,0	1/1:3,0:3:2.99:24,3,0	0/0:29,0:29:58.25:0,58,931	./.	1/1:5,0:5:10.55:56,11,0	1/1:4,0:4:2.88:15,3,0	1/1:6,0:6:2.88:15,3,0	1/1:4,0:4:2.88:15,3,0	./.	1/1:3,0:3:5.68:28,6,0	1/1:2,0:2:3:25,3,0	0/0:12,0:12:36.10:0,36,644	0/0:16,0:16:38.13:0,38,703	1/1:1,11:12:35.84:375,36,0	1/1:2,0:2:3.01:46,3,0	1/1:1,3:4:3.01:46,3,0	./.	./.	0/0:2,0:2:0:0,0,0	1/1:7,0:7:5.75:30,6,0	1/1:4,0:4:5.86:38,6,0	1/1:5,0:5:8.74:54,9,0	1/1:3,0:3:2.88:15,3,0
chr10	30691949	.	C	CTGTGTG	18669	PASS	AB=0.664;AC=45;AF=0.804;AN=56;BaseQRankSum=-1.591;DP=1012;FS=0.484;HRun=0;HaplotypeScore=255.2950;InbreedingCoeff=0.8640;MQ=53.55;MQ0=10;MQRankSum=-6.057;QD=22.91;ReadPosRankSum=2.680;VQSLOD=4.1461;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:21,23:54:27.09:584,27,0	1/1:3,7:11:9.03:254,9,0	0/0:49,0:28:17.05:0,17,304	0/0:53,0:29:27.39:0,27,393	1/1:9,19:31:11.38:248,11,0	1/1:6,16:24:20.36:694,20,0	1/1:9,15:35:26.77:563,27,0	0/0:33,0:34:56.31:0,56,932	1/1:8,24:36:42.01:1185,42,0	1/1:16,25:51:99:2470,104,0	1/1:14,6:21:33:547,33,0	1/1:11,19:38:45.14:1173,45,0	1/1:8,26:41:45.15:1429,45,0	1/1:15,25:43:38.53:1144,39,0	1/1:13,40:57:60.20:1805,60,0	1/1:11,22:41:35.06:899,35,0	0/0:33,0:34:84.03:0,84,1542	0/0:24,0:24:0.32:0,0,607	1/1:11,0:23:46.60:650,47,0	1/1:7,0:40:38.87:557,39,0	0/1:39,0:79:0:1,0,0	1/1:6,19:30:18.02:413,18,0	1/1:15,8:25:29.92:589,30,0	1/1:12,18:36:17.88:535,18,0	1/1:15,17:34:11.41:396,11,0	1/1:4,18:27:63.01:1633,63,0	1/1:8,13:24:21.07:635,21,0	1/1:8,1:9:20.62:263,21,0
chr10	30693272	.	GATAC	G	2340.23	PASS	AB=0.784;AC=26;AF=0.591;AN=44;BaseQRankSum=4.463;DP=518;FS=0.000;HRun=0;HaplotypeScore=167.2298;InbreedingCoeff=0.3916;MQ=47.38;MQ0=5;MQRankSum=0.686;QD=8.57;ReadPosRankSum=5.535;VQSLOD=1.9729;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,3:13:9.03:148,9,0	0/1:1,4:5:0:0,0,0	./.	./.	1/1:9,13:22:5.80:98,6,0	1/1:19,2:20:6.02:99,6,0	1/1:10,3:13:3.01:46,3,0	0/0:45,0:43:87.12:0,87,1338	0/0:5,1:6:0:0,0,0	0/1:15,13:28:14.57:706,0,15	1/1:9,12:21:8.93:122,9,0	1/1:6,6:12:12.04:193,12,0	1/1:11,2:12:9.01:133,9,0	1/1:8,6:14:6.02:99,6,0	./.	1/1:7,12:19:3.01:49,3,0	0/0:33,0:32:48.06:0,48,913	0/0:19,0:19:32.93:0,33,602	0/0:9,0:8:17.77:0,18,316	0/0:39,0:39:20.48:0,20,504	0/1:17,0:17:12.38:12,0,135	0/1:20,0:20:0:0,0,1	1/1:6,7:13:18.01:296,18,0	./.	./.	0/1:21,8:28:67.90:290,0,68	0/1:7,6:13:8.85:199,0,9	./.
chr10	30693284	.	C	CATACATACATCT	5144.86	PASS	AB=1.000;AC=30;AF=0.652;AN=46;BaseQRankSum=6.767;DP=468;FS=6.154;HRun=0;HaplotypeScore=175.2032;InbreedingCoeff=0.5271;MQ=41.32;MQ0=22;MQRankSum=-1.180;QD=22.47;ReadPosRankSum=3.666;VQSLOD=3.5411;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:10,0:10:9.03:148,9,0	1/1:5,0:5:0.47:1,0,0	./.	./.	1/1:17,0:20:5.52:135,6,0	1/1:11,0:13:5.94:99,6,0	1/1:7,0:10:4.26:49,4,0	0/0:50,0:42:99:0,105,2119	./.	1/1:20,0:23:57.19:1637,57,0	1/1:15,0:17:8.97:122,9,0	1/1:10,0:11:12:193,12,0	1/1:8,0:10:8.86:132,9,0	1/1:9,0:10:6.02:99,6,0	./.	1/1:16,0:18:2.97:49,3,0	0/0:28,0:27:51.16:0,51,1387	0/0:18,0:18:39.13:0,39,1106	0/1:14,0:8:99:126,0,162	0/0:31,0:31:21.15:0,21,410	0/1:16,0:16:12.38:12,0,135	0/0:0,15:15:0.47:0,0,1	1/1:13,0:13:18.49:296,18,0	./.	0/0:1,36:37:0.47:0,0,1	1/1:20,0:23:42.14:1480,42,0	1/1:10,0:13:21.07:568,21,0	0/0:3,0:3:0.47:0,0,1
chr10	30693402	.	C	CATAG	441.99	PASS	AB=1.000;AC=17;AF=0.472;AN=36;BaseQRankSum=2.967;DP=399;FS=3.488;HRun=0;HaplotypeScore=69.8930;InbreedingCoeff=0.1814;MQ=34.46;MQ0=16;MQRankSum=-3.152;QD=2.62;ReadPosRankSum=-0.694;VQSLOD=1.1924;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	1/1:4,0:4:1.55:4,2,0	1/1:9,0:1:2.68:11,3,0	./.	./.	0/1:14,0:14:0:0,0,0	0/0:13,0:12:8.99:0,9,75	0/0:60,0:40:77.89:0,78,654	0/0:7,0:7:2.92:0,3,17	0/1:18,0:17:25.49:25,0,79	0/1:16,0:15:0:0,0,0	0/1:12,0:11:11.57:12,0,12	1/1:10,0:9:0.47:1,0,0	./.	1/1:5,24:26:12.04:296,12,0	0/0:9,0:9:0.47:0,0,1	0/0:28,0:27:45.04:0,45,478	0/0:26,0:26:45.03:0,45,603	1/1:10,0:7:11.97:118,12,0	./.	0/1:14,0:11:7.96:42,0,8	./.	./.	./.	./.	0/1:15,0:14:27.69:28,0,152	0/1:18,0:17:21.31:21,0,59	./.
chr10	30693418	.	GATACATAC	G	1009.55	PASS	AB=0.860;AC=13;AF=0.325;AN=40;BaseQRankSum=2.049;DP=485;FS=2.017;HRun=0;HaplotypeScore=99.0668;InbreedingCoeff=0.1691;MQ=33.53;MQ0=12;MQRankSum=-2.740;QD=5.77;ReadPosRankSum=3.472;VQSLOD=1.7565;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/1:2,2:4:0.07:0,0,0	0/0:10,0:1:0:0,0,0	./.	./.	./.	0/1:13,1:13:37.95:110,0,38	0/0:61,0:50:72.23:0,72,1368	0/0:9,3:12:3.90:0,4,60	0/1:24,7:28:99:497,0,780	0/1:20,2:20:0:0,0,0	1/1:13,2:14:2.88:36,3,0	0/0:14,1:14:3.48:0,3,79	./.	0/0:31,0:28:12.04:0,12,438	1/1:9,5:13:0.47:1,0,0	0/0:23,0:23:35.54:0,36,1022	0/0:23,0:23:48.16:0,48,1397	0/0:14,0:9:18.50:0,18,287	0/1:10,0:23:0:0,0,0	0/0:12,0:9:0.47:0,0,1	./.	./.	./.	0/0:6,5:11:0:0,0,0	0/1:19,3:21:99:273,0,565	0/1:19,6:24:99:190,0,164	1/1:3,0:3:1.25:3,1,0
chr10	30693434	.	C	CATCT	2111.19	PASS	AB=0.920;AC=11;AF=0.250;AN=44;BaseQRankSum=4.491;DP=531;FS=7.109;HRun=0;HaplotypeScore=95.7144;InbreedingCoeff=0.1148;MQ=33.13;MQ0=26;MQRankSum=-4.077;QD=11.29;ReadPosRankSum=2.763;VQSLOD=1.9318;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	0/1:6,0:6:0.02:0,0,0	0/0:14,0:1:0.47:0,0,1	./.	./.	0/0:22,1:23:4.07:0,4,12	0/1:12,1:13:81.03:111,0,81	0/0:48,0:34:96.33:0,96,1719	0/1:8,4:12:14.97:53,0,15	0/1:28,5:31:99:964,0,113	0/1:24,0:22:0:0,0,0	0/0:13,3:15:3.01:0,3,30	1/1:20,2:22:5.95:89,6,0	0/0:14,1:15:2.04:0,2,6	0/0:30,0:28:0.94:0,1,2	0/0:14,4:17:0.47:0,0,1	0/0:23,0:23:45.59:0,46,777	0/0:20,0:20:54.19:0,54,1010	0/0:15,0:9:17.42:0,17,195	1/1:25,0:23:2.97:20,3,0	0/0:11,0:8:1.25:0,1,3	./.	./.	./.	0/0:16,0:16:0:0,0,0	0/1:24,2:26:99:773,0,143	0/1:25,1:26:91.76:213,0,92	0/0:6,1:7:2.94:0,3,18
chr10	30693462	.	CATAGATG	C	916.49	PASS	AB=0.897;AC=10;AF=0.200;AN=50;BaseQRankSum=4.219;DP=593;FS=8.010;HRun=0;HaplotypeScore=166.0069;InbreedingCoeff=0.0586;MQ=35.59;MQ0=23;MQRankSum=-6.429;QD=4.63;ReadPosRankSum=-1.865;VQSLOD=1.4431;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,2:18:5.72:0,6,346	0/0:5,4:9:2.70:0,3,116	./.	./.	0/0:28,5:31:13.78:0,14,579	0/0:13,5:18:5.19:0,5,231	0/0:8,0:8:8.92:0,9,328	0/0:47,0:36:87.29:0,87,2762	0/0:15,2:17:20.35:0,20,692	0/1:33,12:43:99:541,0,2619	0/0:17,4:20:9.03:0,9,349	0/0:19,3:22:14.31:0,14,369	0/1:21,2:23:28.47:28,0,551	0/1:24,4:28:31.03:31,0,345	1/1:20,0:17:3:25,3,0	0/0:21,6:26:11.27:0,11,360	0/0:23,0:23:40.04:0,40,1320	0/0:19,0:19:47.16:0,47,1497	1/1:6,0:2:5.21:31,5,0	0/0:17,0:15:3.01:0,3,32	./.	0/0:23,3:26:18.06:0,18,699	0/0:27,4:31:14.58:0,15,581	0/0:6,1:7:3.01:0,3,117	0/0:19,1:20:11.84:0,12,466	0/1:28,2:30:99:110,0,2618	0/1:30,6:36:99:278,0,1139	0/1:10,0:10:0.03:0,0,417
chr10	30693477	.	C	CATAG	7223.59	PASS	AB=0.764;AC=36;AF=0.750;AN=48;BaseQRankSum=3.338;DP=559;FS=6.651;HRun=0;HaplotypeScore=118.2963;InbreedingCoeff=0.5261;MQ=36.07;MQ0=15;MQRankSum=2.160;QD=17.08;ReadPosRankSum=5.754;VQSLOD=3.3703;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,13:17:14.08:306,14,0	1/1:6,3:9:1.45:72,1,0	0/0:18,0:2:2.68:0,3,11	0/0:8,0:1:2.88:0,3,15	1/1:20,13:31:14.39:373,14,0	1/1:13,5:18:5.49:149,5,0	1/1:4,3:7:9.02:175,9,0	0/0:44,0:34:83.98:0,84,862	1/1:9,7:16:13.63:372,14,0	0/1:30,12:40:99:1035,0,100	1/1:12,8:19:9.03:225,9,0	1/1:13,7:20:9.03:225,9,0	1/1:12,11:23:13.86:305,14,0	1/1:9,18:27:9.92:236,10,0	./.	1/1:14,15:28:8.68:224,9,0	0/0:21,0:21:32.63:0,33,399	0/0:16,0:16:33:0,33,452	./.	./.	./.	1/1:5,21:26:18.06:449,18,0	1/1:17,15:32:13.75:372,14,0	1/1:2,5:7:3.01:75,3,0	1/1:4,13:16:12:300,12,0	1/1:23,14:37:63.56:1363,64,0	0/1:22,11:33:30.80:599,0,31	1/1:1,9:10:13.30:370,13,0
chr10	30693533	.	CATAGATACATAGATAGATAG	C	1286.13	PASS	AB=0.903;AC=18;AF=0.391;AN=46;BaseQRankSum=2.735;DP=437;FS=0.000;HRun=0;HaplotypeScore=196.9553;InbreedingCoeff=0.3149;MQ=42.61;MQ0=7;MQRankSum=-3.950;QD=6.73;ReadPosRankSum=-1.932;VQSLOD=2.4649;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:17,0:7:11.75:0,12,82	0/0:12,0:2:3:0,3,26	./.	1/1:10,0:10:2.94:119,3,0	0/0:3,0:3:1.25:0,1,3	0/0:47,0:44:99:0,108,2807	0/1:11,0:11:0.01:0,0,0	0/1:17,0:16:99:297,0,157	0/0:16,0:15:2.35:0,2,5	1/1:13,0:13:0.47:1,0,0	1/1:12,0:12:3.01:106,3,0	1/1:25,0:25:0.47:1,0,0	0/0:13,0:13:3.01:0,3,79	1/1:12,0:12:5.97:119,6,0	0/0:22,0:22:48.16:0,48,2151	0/0:13,0:13:32.40:0,32,1413	0/0:4,0:4:12.04:0,12,536	0/0:26,0:26:30.10:0,30,1473	0/0:12,0:10:15.05:0,15,748	./.	0/1:14,14:28:0:0,0,0	./.	0/1:17,0:16:0:0,0,0	0/1:18,9:27:24.80:677,0,25	0/1:13,0:13:50.10:69,0,50	1/1:6,0:6:2.97:20,3,0
chr10	30694101	.	T	TA	1282.28	PASS	AB=0.969;AC=10;AF=0.179;AN=56;BaseQRankSum=-4.475;DP=497;FS=1.772;HRun=11;HaplotypeScore=57.8738;InbreedingCoeff=0.7568;MQ=62.67;MQ0=4;MQRankSum=-1.674;QD=12.82;ReadPosRankSum=-0.908;VQSLOD=3.2747;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:62.69:0,63,481	0/0:9,0:9:26.90:0,27,209	0/1:11,0:8:31.78:32,0,80	0/0:8,0:7:6.42:0,6,44	0/0:22,2:24:32.27:0,32,431	0/0:9,0:9:20.91:0,21,162	0/0:11,0:11:20.91:0,21,163	0/0:35,3:38:45.86:0,46,515	0/0:14,0:14:14.98:0,15,253	0/0:14,0:15:28.90:0,29,212	0/0:21,0:21:50.48:0,50,380	0/0:13,0:13:35.85:0,36,279	0/0:13,0:15:42.93:0,43,314	0/0:19,0:20:46.80:0,47,347	1/1:12,9:21:44.80:397,45,0	0/0:15,0:17:21.24:0,21,282	0/0:21,0:20:22.21:0,22,280	0/0:16,0:16:19:0,19,197	1/1:5,18:22:48.07:478,48,0	1/1:2,15:17:36.03:354,36,0	1/1:5,8:12:18.04:183,18,0	0/0:7,0:7:17.93:0,18,139	0/1:14,1:15:3.62:4,0,159	0/0:14,0:14:32.86:0,33,255	0/0:30,0:29:71.67:0,72,554	0/0:28,0:28:67.89:0,68,504	0/0:28,0:28:65.65:0,66,505	0/0:14,0:14:41.84:0,42,325
chr10	30694116	.	T	TGAAA	726.75	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.138;DP=518;FS=8.177;HRun=0;HaplotypeScore=88.9220;InbreedingCoeff=0.7780;MQ=67.06;MQ0=1;MQRankSum=-3.464;QD=38.25;ReadPosRankSum=0.995;VQSLOD=3.6149;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:72.22:0,72,1201	0/0:11,0:11:30.10:0,30,513	0/0:13,0:12:14.41:0,14,208	0/0:8,0:6:0.62:0,1,117	0/0:29,0:29:81.24:0,81,1329	0/0:13,0:13:30.09:0,30,491	0/0:10,0:10:18.06:0,18,303	0/0:36,0:36:69.18:0,69,1104	0/0:14,0:14:39.10:0,39,618	0/0:14,0:14:36.11:0,36,574	0/0:21,0:21:39.13:0,39,673	0/0:15,0:15:36.12:0,36,616	0/0:15,0:15:36.12:0,36,620	0/0:20,0:20:57.17:0,57,918	1/1:6,13:19:33.11:821,33,0	0/0:18,0:18:45.15:0,45,774	0/0:21,0:20:54.15:0,54,870	0/0:17,0:17:39.11:0,39,616	0/0:24,0:24:63.19:0,63,973	0/0:17,0:17:45.11:0,45,698	0/0:12,0:11:24.08:0,24,405	0/0:6,0:6:18.06:0,18,311	0/0:17,0:17:46.67:0,47,698	0/0:14,0:14:42.11:0,42,669	0/0:32,0:31:75.22:0,75,1218	0/0:27,0:27:72.24:0,72,1216	0/0:26,0:26:72.20:0,72,1156	0/0:22,0:22:60.20:0,60,989
chr10	30695563	.	CA	C	7694.99	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-3.750;DP=595;FS=6.855;HRun=10;HaplotypeScore=82.1692;InbreedingCoeff=0.9623;MQ=65.18;MQ0=1;MQRankSum=2.928;QD=20.20;ReadPosRankSum=4.630;VQSLOD=5.5572;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,20:24:47.35:399,47,0	1/1:1,13:14:35.99:313,36,0	0/0:14,0:13:29.39:0,29,277	0/0:29,0:15:2.93:0,3,143	1/1:4,17:21:50.97:440,51,0	1/1:5,17:22:53.98:468,54,0	1/1:7,17:24:41.97:365,42,0	0/0:32,0:33:80.99:0,81,855	1/1:2,19:21:20.82:410,21,0	1/1:3,28:31:80.96:700,81,0	1/1:3,14:17:38.98:339,39,0	1/1:6,11:17:38.97:336,39,0	1/1:5,20:25:38.94:563,39,0	1/1:3,8:11:23.98:208,24,0	0/0:2,0:31:31.54:0,32,178	1/1:2,15:17:38.87:338,39,0	0/0:28,0:32:72.03:0,72,777	0/0:15,0:15:30.08:0,30,332	0/0:20,0:19:42.66:0,43,238	0/0:28,0:28:59.02:0,59,295	0/0:12,0:12:16.98:0,17,87	1/1:3,21:25:64.97:543,65,0	1/1:2,14:16:32.71:285,33,0	1/1:1,24:25:65.99:573,66,0	1/1:2,16:18:44.98:391,45,0	1/1:5,15:20:11.40:348,11,0	1/1:5,22:27:59.96:521,60,0	1/1:0,6:6:18:156,18,0
chr10	30695566	.	A	AC	657.15	PASS	AB=0.890;AC=5;AF=0.089;AN=56;BaseQRankSum=2.968;DP=589;FS=13.848;HRun=0;HaplotypeScore=106.5085;InbreedingCoeff=0.3348;MQ=65.38;MQ0=1;MQRankSum=-8.259;QD=7.22;ReadPosRankSum=-0.745;VQSLOD=2.6201;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:53.41:0,53,365	0/0:13,0:13:35.55:0,36,235	0/0:14,0:13:32.98:0,33,381	0/0:27,0:13:28.63:0,29,280	0/0:21,0:21:62.09:0,62,425	0/0:22,0:22:65.29:0,65,446	0/0:25,0:25:68.39:0,68,494	0/0:32,0:32:90.81:0,91,1203	0/0:21,0:21:56.43:0,56,404	0/0:30,0:30:88.66:0,89,595	0/0:17,0:17:50.35:0,50,346	0/0:17,0:17:44.56:0,45,311	0/0:26,0:26:77.21:0,77,551	0/0:12,0:12:35.73:0,36,261	0/1:27,0:27:29.93:77,0,30	0/0:17,0:17:44.54:0,45,311	0/0:31,0:31:76.42:0,76,1053	0/0:15,0:15:42.02:0,42,508	0/1:21,2:22:99:145,0,103	1/1:17,12:29:13.41:500,13,0	0/1:8,4:12:15.17:57,0,15	0/0:24,0:24:71.18:0,71,483	0/0:16,0:16:39.47:0,39,269	0/0:25,0:25:65.23:0,65,433	0/0:18,0:18:50.49:0,50,351	0/0:19,0:19:55.70:0,56,398	0/0:28,0:26:76.88:0,77,531	0/0:6,0:6:17.78:0,18,117
chr10	30695573	.	A	AC	947.52	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-1.834;DP=571;FS=4.857;HRun=1;HaplotypeScore=105.3562;InbreedingCoeff=0.9841;MQ=71.09;MQ0=0;MQRankSum=1.328;QD=15.04;ReadPosRankSum=-3.381;VQSLOD=2.3173;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:47.33:0,47,276	0/0:14,0:14:41:0,41,244	0/0:13,0:12:29.02:0,29,336	0/0:21,0:14:22.08:0,22,222	0/0:23,0:23:61.36:0,61,382	0/0:22,0:22:61.64:0,62,380	0/0:20,0:20:49.95:0,50,314	0/0:33,0:33:90.81:0,91,1127	0/0:21,0:21:55.71:0,56,350	0/0:30,0:30:84.99:0,85,509	0/0:15,0:15:40.95:0,41,244	0/0:16,0:16:40.97:0,41,246	0/0:26,0:26:76:0,76,465	0/0:11,0:11:29.38:0,29,182	0/0:27,0:27:27.75:0,28,147	0/0:15,0:15:38.02:0,38,218	0/0:29,0:29:69:0,69,892	0/0:14,0:14:18.10:0,18,395	1/1:2,17:21:53.99:538,54,0	1/1:5,9:26:33.63:364,34,0	1/1:0,11:15:13.66:185,14,0	0/0:24,0:24:70.19:0,70,414	0/0:15,0:15:35.17:0,35,212	0/0:30,0:30:76.08:0,76,447	0/0:18,0:18:49.79:0,50,297	0/0:17,0:17:44.17:0,44,288	0/0:26,0:24:62.75:0,63,397	0/0:6,0:6:17.55:0,18,101
chr10	30696053	.	GGGC	G	2463.78	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.783;DP=579;FS=6.328;HRun=0;HaplotypeScore=80.4529;InbreedingCoeff=0.9968;MQ=91.50;MQ0=0;MQRankSum=-1.381;QD=36.23;ReadPosRankSum=1.431;VQSLOD=4.2187;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:99:0,99,2339	0/0:8,0:8:24.08:0,24,573	0/0:19,0:19:57.16:0,57,1220	0/0:28,0:28:75.25:0,75,1671	0/0:23,0:23:63.19:0,63,1376	0/0:13,0:13:39.13:0,39,936	0/0:25,0:25:75.24:0,75,1749	0/0:29,0:29:87.28:0,87,1919	0/0:20,0:20:60.21:0,60,1436	0/0:19,0:19:54.16:0,54,1188	0/0:14,0:14:36.12:0,36,841	0/0:33,0:33:99:0,99,2350	0/0:22,0:22:66.18:0,66,1545	0/0:18,0:18:54.18:0,54,1206	0/0:25,0:25:75.26:0,75,1772	0/0:24,0:23:72.23:0,72,1701	0/0:21,0:21:63.22:0,63,1526	0/0:23,0:23:69.22:0,69,1651	1/1:1,18:19:56.85:948,57,0	1/1:2,15:17:21.25:597,21,0	1/1:0,32:32:57.20:1061,57,0	0/0:17,0:17:48.16:0,48,1121	0/0:10,0:10:30.10:0,30,681	0/0:26,0:26:75.21:0,75,1681	0/0:19,0:19:57.20:0,57,1295	0/0:11,0:11:33.11:0,33,782	0/0:23,0:22:69.24:0,69,1673	0/0:8,0:8:24.08:0,24,543
chr10	30697064	.	TG	T	12893.21	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=10.605;DP=634;FS=3.697;HRun=7;HaplotypeScore=63.3565;InbreedingCoeff=0.9990;MQ=85.72;MQ0=0;MQRankSum=-3.356;QD=26.58;ReadPosRankSum=5.352;VQSLOD=5.3547;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:2,45:47:99:1255,123,0	1/1:0,10:10:30.07:306,30,0	0/0:21,0:21:57.14:0,57,653	0/0:20,0:20:43.88:0,44,536	1/1:1,18:19:48.07:479,48,0	1/1:1,16:17:45.10:459,45,0	1/1:4,22:26:63.14:643,63,0	0/0:29,0:29:84.24:0,84,1021	1/1:2,14:16:42.10:429,42,0	1/1:3,27:30:78.17:796,78,0	1/1:3,11:14:33.07:334,33,0	1/1:2,17:19:45.10:459,45,0	1/1:1,15:16:45.10:459,45,0	1/1:2,24:26:72.16:734,72,0	0/0:21,0:21:60.18:0,60,742	1/1:3,23:26:63.14:643,63,0	0/0:40,0:40:99:0,105,1321	0/0:18,0:18:51.12:0,51,624	1/1:7,7:14:21.04:214,21,0	1/1:1,19:20:51.11:520,51,0	1/1:3,40:43:99:1163,114,0	1/1:0,16:16:48.11:490,48,0	1/1:1,14:15:42.09:428,42,0	1/1:0,29:29:75.17:765,75,0	1/1:1,18:19:54.12:551,54,0	1/1:1,20:21:60.11:603,60,0	1/1:0,26:26:78.18:796,78,0	1/1:3,13:16:36.08:367,36,0
chr10	30697560	.	TCACACACACACACACA	T	12855.92	PASS	AC=36;AF=0.667;AN=54;BaseQRankSum=8.687;DP=651;FS=3.800;HRun=0;HaplotypeScore=244.3265;InbreedingCoeff=0.8867;MQ=67.66;MQ0=13;MQRankSum=-7.042;QD=31.28;ReadPosRankSum=0.800;VQSLOD=3.3062;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,11:22:11.63:187,12,0	1/1:1,9:10:20.99:571,21,0	0/0:32,0:19:2.99:0,3,27	./.	1/1:6,16:23:27.79:532,28,0	1/1:5,21:26:32.96:966,33,0	1/1:4,12:16:11.87:80,12,0	0/0:22,0:20:38.13:0,38,1197	1/1:5,12:19:20.99:684,21,0	1/1:10,15:24:24.66:1019,25,0	1/1:12,23:36:35.61:507,36,0	1/1:4,16:21:12.64:952,13,0	1/1:2,23:24:33.11:1457,33,0	1/1:8,14:24:23.95:615,24,0	0/0:10,0:24:30.10:0,30,1549	1/1:8,19:27:26.54:631,27,0	0/0:20,0:20:42.14:0,42,2489	0/0:23,0:25:52.42:0,52,2966	0/0:18,0:17:33.28:0,33,1730	0/0:15,0:34:25.52:0,26,1232	0/0:10,0:20:21.07:0,21,915	1/1:4,12:16:2.62:186,3,0	1/1:3,21:24:23.95:548,24,0	0/0:5,2:7:2.99:0,3,24	1/1:5,27:34:24.83:1032,25,0	1/1:11,15:26:10.52:935,11,0	1/1:8,20:28:26.47:1375,26,0	1/1:0,7:9:15.05:581,15,0
chr10	30697744	.	AAC	A	15511.93	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=14.933;DP=857;FS=2.925;HRun=0;HaplotypeScore=116.4313;InbreedingCoeff=0.9877;MQ=62.72;MQ0=3;MQRankSum=-0.477;QD=29.16;ReadPosRankSum=5.796;VQSLOD=5.9832;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,23:26:63.17:771,63,0	1/1:0,9:9:27.09:338,27,0	0/0:44,0:35:66:0,66,962	0/0:38,0:33:54.79:0,55,918	1/1:7,28:35:75.20:921,75,0	1/1:4,26:30:57.18:713,57,0	1/1:8,10:18:33.10:413,33,0	0/0:68,0:69:99:0,156,2481	1/1:3,27:29:63.20:788,63,0	1/1:4,33:37:90.29:1125,90,0	1/1:3,25:29:75.03:897,75,0	1/1:3,32:35:84.27:1051,84,0	1/1:1,33:34:90.12:1102,90,0	1/1:5,32:37:66.21:826,66,0	0/0:42,0:42:99:0,117,1928	1/1:1,38:39:99:1314,105,0	0/0:23,0:23:59.01:0,59,917	0/0:27,0:28:58.95:0,59,1158	0/0:17,0:17:45.15:0,45,741	0/0:32,0:32:81.28:0,81,1337	0/0:32,0:32:78.27:0,78,1261	1/1:3,14:17:14.16:425,14,0	1/1:2,24:26:66.21:826,66,0	1/1:2,17:19:48.15:601,48,0	1/1:4,25:29:72.23:901,72,0	1/1:5,37:42:99:1376,111,0	1/1:5,29:34:81.26:1013,81,0	1/1:1,4:5:9.03:113,9,0
chr10	30698515	.	ATC	A	3740.06	PASS	AB=0.979;AC=33;AF=0.589;AN=56;BaseQRankSum=12.466;DP=577;FS=11.858;HRun=0;HaplotypeScore=107.3891;InbreedingCoeff=0.0278;MQ=78.43;MQ0=2;MQRankSum=-4.329;QD=7.97;ReadPosRankSum=11.015;VQSLOD=0.8306;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:38,0:38:53.37:239,0,53	0/1:15,0:15:9.68:121,0,10	0/0:18,0:18:3.58:0,4,557	0/0:24,0:24:54.71:0,55,810	1/1:26,0:26:38.12:259,38,0	1/1:19,1:20:23.76:181,24,0	0/1:23,0:23:74.72:94,0,75	0/0:14,0:14:33.05:0,33,415	1/1:17,0:17:22.30:204,22,0	0/1:14,0:14:42.15:74,0,42	0/1:15,0:15:15.75:90,0,16	1/1:22,1:23:4.88:226,5,0	1/1:21,1:22:32.43:253,32,0	1/1:19,0:19:31.20:191,31,0	1/1:25,0:24:53.82:231,54,0	0/1:20,0:20:29.35:88,0,29	0/0:34,0:34:99:0,102,1761	0/0:16,0:17:19.47:0,19,762	0/1:20,0:20:72.05:72,0,72	0/1:21,2:23:25.38:212,0,25	1/1:27,0:27:43.59:264,44,0	1/1:18,0:18:15.70:169,16,0	0/1:10,0:10:21.99:70,0,22	0/1:32,0:31:18.75:209,0,19	0/1:13,2:15:11.05:172,0,11	0/1:11,0:11:3.54:48,0,4	0/1:21,2:23:57.55:119,0,58	1/1:13,0:13:34.61:153,35,0
chr10	30698516	.	TCC	T	12509.81	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=2.220;DP=569;FS=24.638;HRun=10;HaplotypeScore=77.7565;InbreedingCoeff=0.9878;MQ=77.98;MQ0=2;MQRankSum=-4.228;QD=27.14;ReadPosRankSum=5.109;VQSLOD=3.0241;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,32:36:87.22:970,87,0	1/1:2,12:14:36.09:401,36,0	0/0:18,0:18:14.73:0,15,452	0/0:24,0:24:44.54:0,45,566	1/1:1,25:26:68.40:741,68,0	1/1:2,18:20:54.15:602,54,0	1/1:5,18:23:42.09:468,42,0	0/0:14,0:14:12.02:0,12,166	1/1:1,16:17:48.13:535,48,0	1/1:3,11:14:33.07:368,33,0	1/1:2,13:15:30.07:334,30,0	1/1:4,19:23:51.13:568,51,0	1/1:2,20:22:60.15:668,60,0	1/1:1,17:18:48.12:535,48,0	1/1:0,25:24:63.17:702,63,0	1/1:2,17:19:39.10:435,39,0	0/0:31,0:34:88.76:0,89,1302	0/0:15,0:16:31.87:0,32,568	1/1:5,15:20:47.90:505,48,0	1/1:4,19:23:54.13:601,54,0	1/1:1,26:27:75.19:836,75,0	1/1:1,17:18:42.10:466,42,0	1/1:2,8:10:24.06:268,24,0	1/1:2,28:29:75.20:836,75,0	1/1:4,11:15:39.10:434,39,0	1/1:1,10:11:30.08:334,30,0	1/1:6,16:22:42.10:468,42,0	1/1:0,13:13:39.11:435,39,0
chr10	30698659	.	T	TG	1365.97	PASS	AB=0.799;AC=24;AF=0.462;AN=52;BaseQRankSum=-3.441;DP=352;FS=4.095;HRun=11;HaplotypeScore=67.6186;InbreedingCoeff=-0.1571;MQ=78.17;MQ0=0;MQRankSum=-1.089;QD=5.17;ReadPosRankSum=-2.284;VQSLOD=1.1854;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:8,5:13:14.19:52,0,14	./.	0/0:11,0:9:11.82:0,12,82	0/1:12,0:10:9.78:10,0,23	0/1:3,7:11:21.07:22,0,21	0/1:8,5:13:14.21:52,0,14	0/1:5,13:18:2.20:162,0,2	0/1:6,2:9:0.74:25,0,1	0/0:3,0:3:2.95:0,3,23	0/1:9,1:10:17.23:24,0,17	0/1:7,1:8:17.24:19,0,17	1/1:7,6:14:5.61:60,6,0	1/1:8,4:12:12.01:115,12,0	0/1:7,1:8:14.22:46,0,14	0/0:7,0:33:44.79:0,45,130	0/0:12,0:13:16.89:0,17,122	0/1:15,11:27:17.55:328,0,18	0/1:7,3:10:14.25:43,0,14	0/1:4,0:9:2.55:3,0,53	0/1:10,0:11:9.32:9,0,45	0/0:11,0:11:8.66:0,9,69	1/1:12,5:17:13.27:125,13,0	0/1:8,7:16:48.92:94,0,49	1/1:4,14:18:13.27:124,13,0	0/1:10,3:14:38.16:47,0,38	0/0:14,2:16:8.43:0,8,56	0/1:7,7:14:2.19:162,0,2	./.
chr10	30698764	.	TCACA	T	582.97	PASS	AB=0.859;AC=22;AF=0.458;AN=48;BaseQRankSum=0.897;DP=378;FS=8.775;HRun=0;HaplotypeScore=71.7112;InbreedingCoeff=0.3093;MQ=74.96;MQ0=14;MQRankSum=-1.154;QD=3.39;ReadPosRankSum=0.128;VQSLOD=-0.1413;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:13:0.33:0,0,18	0/0:5,0:5:0.47:0,0,1	./.	0/0:42,0:25:0:0,0,0	1/1:8,0:13:3.89:30,4,0	0/0:15,0:15:5.97:0,6,77	0/1:13,4:17:3.42:83,0,3	0/0:16,0:15:0.47:0,0,1	1/1:5,0:5:5.69:57,6,0	0/0:12,0:12:5.59:0,6,27	0/1:7,0:7:2.22:2,0,21	0/0:6,0:6:2.74:0,3,12	0/0:7,0:9:5.49:0,5,24	0/0:13,0:13:8.65:0,9,52	1/1:7,0:13:6.01:56,6,0	0/0:7,0:9:5.49:0,5,24	0/1:15,6:21:24.02:168,0,24	1/1:19,4:20:2.07:44,2,0	1/1:5,0:7:3:28,3,0	1/1:9,0:14:8.85:64,9,0	./.	./.	1/1:7,3:11:9.02:120,9,0	1/1:13,3:16:3.01:46,3,0	0/0:8,0:8:11.64:0,12,148	0/1:12,2:14:7.25:19,0,7	1/1:10,0:10:0.88:2,1,0	./.
chr10	30700118	.	GTGT	G	17512.14	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=13.139;DP=726;FS=6.964;HRun=0;HaplotypeScore=115.0933;InbreedingCoeff=0.9998;MQ=88.91;MQ0=0;MQRankSum=-5.892;QD=36.95;ReadPosRankSum=5.322;VQSLOD=5.6517;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,52:57:99:2186,141,0	1/1:1,16:17:48.16:741,48,0	0/0:28,0:27:54.72:0,55,1145	0/0:33,0:33:79.10:0,79,1458	1/1:2,24:26:69.07:1055,69,0	1/1:1,22:23:51.17:789,51,0	1/1:5,26:31:72.24:1115,72,0	0/0:31,0:31:81.27:0,81,1702	1/1:3,13:16:33.11:509,33,0	1/1:1,26:27:78.24:1174,78,0	1/1:3,23:26:63.21:984,63,0	1/1:6,24:30:50.91:797,51,0	1/1:2,24:26:54.18:844,54,0	1/1:2,26:28:66.22:1023,66,0	0/0:33,0:33:87.30:0,87,1834	1/1:2,26:28:72.24:1125,72,0	0/0:28,0:28:75.26:0,75,1623	0/0:20,0:20:51.18:0,51,1102	0/0:17,0:17:48.14:0,48,960	0/0:19,0:19:57.18:0,57,1194	0/0:43,0:43:99:0,114,2450	1/1:1,19:20:51.17:796,51,0	1/1:0,12:12:30.10:469,30,0	1/1:1,23:24:50.87:759,51,0	1/1:0,21:21:45.15:694,45,0	1/1:2,23:25:69.19:1052,69,0	1/1:3,22:25:57.19:883,57,0	1/1:1,11:12:33.11:516,33,0
chr10	30700419	.	A	ATT	1238.57	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-2.048;DP=332;FS=7.966;HRun=8;HaplotypeScore=42.5899;InbreedingCoeff=0.9561;MQ=75.58;MQ0=0;MQRankSum=-0.143;QD=24.77;ReadPosRankSum=0.026;VQSLOD=1.7289;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:45.12:0,45,501	0/0:9,0:9:18.05:0,18,199	0/0:12,0:12:18.05:0,18,221	0/0:7,0:7:12.03:0,12,133	0/0:10,0:10:27.07:0,27,301	0/0:16,0:16:39.09:0,39,433	0/0:11,0:11:27.05:0,27,291	0/0:25,0:25:60.13:0,60,658	0/0:11,0:11:21.05:0,21,234	0/0:10,0:10:24.06:0,24,268	0/0:8,0:8:21.05:0,21,234	0/0:7,0:7:21.04:0,21,223	0/0:7,0:7:15.04:0,15,161	0/0:7,0:7:18.05:0,18,200	1/1:0,0:12:27.32:94,27,0	0/0:11,0:11:33.09:0,33,366	0/0:22,0:22:60.13:0,60,658	0/0:7,0:7:15.01:0,15,154	1/1:5,11:16:39.10:585,39,0	1/1:4,3:7:15.03:194,15,0	1/1:2,13:15:33.11:524,33,0	0/0:12,0:12:30.08:0,30,334	0/0:12,0:12:36.05:0,36,379	0/0:13,0:13:18.02:0,18,201	0/0:18,0:18:45.07:0,45,488	0/0:9,0:9:27.07:0,27,301	0/0:16,0:16:42.10:0,42,466	0/0:4,0:4:12.03:0,12,134
chr10	30700626	.	T	TAAA	334.31	PASS	AB=1.000;AC=8;AF=0.160;AN=50;BaseQRankSum=1.541;DP=185;FS=4.385;HRun=11;HaplotypeScore=38.7718;InbreedingCoeff=0.4414;MQ=59.03;MQ0=26;MQRankSum=-2.428;QD=11.53;ReadPosRankSum=-1.541;VQSLOD=-0.6777;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:13:20.98:0,21,245	0/0:4,0:3:9.03:0,9,105	0/1:5,0:4:16.99:17,0,29	0/0:5,0:3:2.84:0,3,31	0/0:3,0:3:9.03:0,9,105	0/0:3,0:2:2.97:0,3,35	0/0:5,0:5:12.04:0,12,140	0/0:21,0:22:43.53:0,44,506	0/0:5,0:5:5.95:0,6,70	./.	0/0:4,0:4:8.97:0,9,88	0/0:4,0:3:2.99:0,3,35	0/0:6,0:6:8.93:0,9,105	0/1:2,0:2:0:0,0,0	./.	0/0:4,0:3:2.93:0,3,35	0/0:19,0:15:29.13:0,29,355	0/0:8,0:9:13.75:0,14,145	1/1:5,3:9:23.99:304,24,0	1/1:4,0:4:6.01:65,6,0	1/1:7,1:4:5.93:73,6,0	./.	0/0:2,0:2:3.01:0,3,35	0/0:10,0:8:24:0,24,263	0/0:7,0:6:18.05:0,18,210	0/0:9,0:5:9.02:0,9,105	0/0:2,0:1:3.01:0,3,35	0/0:9,0:10:25.64:0,26,300
chr10	30700649	.	TAC	T	137.23	PASS	AB=1.000;AC=23;AF=0.442;AN=52;BaseQRankSum=3.473;DP=158;FS=13.066;HRun=0;HaplotypeScore=36.0465;InbreedingCoeff=0.1152;MQ=75.06;MQ0=2;MQRankSum=-0.832;QD=1.78;ReadPosRankSum=4.453;VQSLOD=-0.2095;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:11,0:10:29.58:30,0,32	0/1:4,0:4:3.68:4,0,14	0/0:9,0:7:14.95:0,15,135	0/0:5,0:3:3.24:0,3,33	0/0:4,0:4:6.12:0,6,40	0/0:3,0:3:0.70:0,1,13	0/1:7,0:7:2.35:2,0,29	0/0:19,0:19:57.01:0,57,702	1/1:3,0:3:2.21:19,2,0	./.	0/1:4,0:4:2.23:2,0,26	1/1:1,0:1:2.50:9,2,0	0/1:5,0:4:6.03:24,0,6	1/1:0,3:3:3.01:42,3,0	0/0:2,0:1:3.01:0,3,49	1/1:2,0:2:2.50:9,2,0	0/0:19,0:19:36.16:0,36,613	0/0:11,0:11:11.60:0,12,289	0/1:7,0:7:5.36:5,0,59	1/1:2,1:2:4.56:33,5,0	0/1:4,0:4:9.08:9,0,19	./.	0/0:2,0:2:0.70:0,1,13	0/1:9,0:9:8.77:9,0,71	0/0:6,0:6:3.28:0,3,39	0/1:2,0:2:4.23:4,0,19	1/1:1,0:1:2.37:8,2,0	1/1:11,0:11:22.81:71,23,0
chr10	30700651	.	CAA	C	1219.85	PASS	AB=0.681;AC=37;AF=0.712;AN=52;BaseQRankSum=-0.098;DP=166;FS=0.815;HRun=14;HaplotypeScore=32.5813;InbreedingCoeff=0.3908;MQ=73.77;MQ0=3;MQRankSum=-0.130;QD=12.98;ReadPosRankSum=3.800;VQSLOD=1.2429;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,6:11:17.93:165,18,0	1/1:1,3:4:8.99:83,9,0	0/0:9,0:7:6.39:0,6,41	0/0:7,0:4:2.97:0,3,42	1/1:0,3:4:5.66:39,6,0	1/1:1,2:3:2.99:28,3,0	1/1:1,5:7:5.87:102,6,0	0/0:18,0:19:34.56:0,35,393	1/1:2,1:3:5.88:43,6,0	./.	0/1:2,2:4:4.97:62,0,5	1/1:0,1:1:3:28,3,0	1/1:2,3:4:8.73:82,9,0	1/1:3,0:3:3:25,3,0	0/0:3,0:2:5.98:0,6,62	1/1:0,1:1:3:28,3,0	0/0:18,0:21:51.86:0,52,575	0/0:11,0:11:12.71:0,13,218	0/1:5,1:7:0.39:38,0,0	1/1:2,1:2:6.01:55,6,0	1/1:2,2:4:2.99:28,3,0	./.	0/1:1,1:3:19.27:19,0,25	1/1:6,3:9:5.79:102,6,0	1/1:4,2:6:1.23:90,1,0	1/1:1,2:3:2.92:28,3,0	1/1:1,0:1:3:25,3,0	1/1:0,11:11:33.04:305,33,0
chr10	30700770	.	A	AT	2263.95	PASS	AC=44;AF=0.815;AN=54;BaseQRankSum=4.447;DP=176;FS=12.569;HRun=3;HaplotypeScore=30.0751;InbreedingCoeff=0.5968;MQ=87.40;MQ0=1;MQRankSum=-8.177;QD=31.89;ReadPosRankSum=0.858;VQSLOD=1.8416;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,4:3:9.03:126,9,0	1/1:1,2:3:6.02:84,6,0	0/0:8,0:4:3.14:0,3,77	0/0:20,0:14:11.09:0,11,76	1/1:0,1:1:3.01:42,3,0	1/1:0,6:6:12.04:168,12,0	1/1:1,1:2:6.01:67,6,0	0/0:32,0:32:87.25:0,87,1025	1/1:0,3:3:9.03:126,9,0	1/1:1,3:4:9.03:126,9,0	1/1:0,1:1:3.01:42,3,0	1/1:1,3:4:11.99:145,12,0	1/1:2,6:7:17.95:205,18,0	1/1:0,1:1:3.01:42,3,0	1/1:0,4:3:9.03:126,9,0	1/1:1,2:3:9.03:126,9,0	0/0:25,0:25:72.22:0,72,864	0/0:20,0:20:57.17:0,57,684	1/1:2,4:6:15.05:209,15,0	1/1:0,1:1:3.01:42,3,0	1/1:0,1:1:3.01:42,3,0	./.	1/1:0,3:3:9.03:125,9,0	1/1:0,2:2:2.96:19,3,0	1/1:0,2:2:6.02:84,6,0	1/1:1,2:3:8.99:104,9,0	1/1:0,5:5:15.05:210,15,0	1/1:0,4:4:12.04:168,12,0
chr10	30700790	.	T	TA	2459.71	PASS	AB=0.755;AC=46;AF=0.821;AN=56;BaseQRankSum=8.755;DP=221;FS=27.450;HRun=0;HaplotypeScore=44.2614;InbreedingCoeff=0.5491;MQ=82.05;MQ0=1;MQRankSum=-2.225;QD=17.95;ReadPosRankSum=-1.800;VQSLOD=2.1918;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,4:5:4.25:64,4,0	1/1:1,3:4:8.94:84,9,0	0/0:6,0:3:6.58:0,7,26	0/1:20,0:13:1.19:1,0,109	1/1:0,5:5:11.87:100,12,0	1/1:0,2:2:6.02:68,6,0	1/1:0,2:2:6.02:70,6,0	0/0:28,0:28:84.28:0,84,1174	1/1:1,2:4:9:88,9,0	1/1:1,5:6:15.51:170,16,0	1/1:0,4:4:11.87:101,12,0	1/1:0,7:7:15.04:173,15,0	1/1:0,9:8:21.06:238,21,0	1/1:0,2:2:6.02:67,6,0	1/1:0,6:6:12.03:136,12,0	1/1:0,4:4:9.03:101,9,0	0/0:23,0:23:69.19:0,69,937	0/0:27,0:27:81.24:0,81,1109	0/1:2,8:10:13.66:240,0,14	1/1:2,3:5:8.28:70,8,0	1/1:2,0:2:1.83:20,2,0	1/1:0,2:2:6.02:66,6,0	1/1:0,6:6:12.03:137,12,0	1/1:0,3:3:6.02:66,6,0	1/1:0,4:4:6.02:68,6,0	1/1:0,7:7:21.02:221,21,0	1/1:1,7:8:9.86:131,10,0	1/1:1,7:8:12.04:139,12,0
chr10	30702992	.	CA	C	10186.32	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=15.349;DP=591;FS=11.846;HRun=7;HaplotypeScore=90.1445;InbreedingCoeff=0.9944;MQ=81.69;MQ0=0;MQRankSum=-0.661;QD=26.67;ReadPosRankSum=3.893;VQSLOD=4.6005;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,19:20:51.12:520,51,0	1/1:3,6:9:12.02:122,12,0	0/0:19,0:19:36.19:0,36,485	0/0:12,0:12:27.01:0,27,284	1/1:2,27:29:81.18:826,81,0	1/1:1,19:20:48.11:490,48,0	1/1:1,9:10:24.05:245,24,0	0/0:40,0:40:93.29:0,93,1159	1/1:0,17:17:48.11:490,48,0	1/1:1,31:32:93.14:925,93,0	1/1:2,33:35:96.18:968,96,0	1/1:0,17:17:48.11:489,48,0	1/1:1,17:18:42.10:429,42,0	1/1:3,14:17:39.09:398,39,0	0/0:20,0:20:57.17:0,57,707	1/1:1,24:25:69.16:704,69,0	0/0:25,0:25:72.23:0,72,906	0/0:21,0:21:57.15:0,57,690	0/0:22,0:22:63.20:0,63,793	0/0:37,0:37:99:0,99,1244	0/0:12,0:12:33.11:0,33,415	1/1:1,15:16:45.10:459,45,0	1/1:1,19:20:42.09:428,42,0	1/1:0,10:10:27.06:275,27,0	1/1:1,15:16:42.09:429,42,0	1/1:2,26:28:75.16:765,75,0	1/1:2,28:30:84.19:857,84,0	1/1:1,12:13:36.08:367,36,0
chr10	30703483	.	T	TAC	34336.16	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-12.394;DP=804;FS=0.712;HRun=0;HaplotypeScore=87.3370;InbreedingCoeff=0.9981;MQ=87.75;MQ0=2;MQRankSum=-7.216;QD=52.10;ReadPosRankSum=7.413;VQSLOD=5.4997;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,39:41:99:2123,111,0	1/1:0,19:19:48.16:927,48,0	0/0:27,0:27:72.22:0,72,1064	0/0:34,0:34:99:0,99,1361	1/1:1,27:28:78.27:1507,78,0	1/1:0,24:24:63.22:1217,63,0	1/1:1,22:23:60.21:1159,60,0	0/0:35,0:35:96.33:0,96,1460	1/1:0,19:18:48.16:927,48,0	1/1:2,41:43:99:2376,123,0	1/1:2,26:29:72.25:1385,72,0	1/1:1,28:29:81.28:1565,81,0	1/1:2,33:35:93.32:1796,93,0	1/1:1,21:22:57.20:1101,57,0	1/1:0,33:33:96.33:1855,96,0	1/1:2,30:32:93.32:1758,93,0	0/0:22,0:22:66.22:0,66,1005	0/0:27,0:27:78.22:0,78,1169	1/1:7,24:31:84.26:1584,84,0	1/1:2,30:31:87.30:1681,87,0	1/1:0,54:54:99:2840,148,0	1/1:0,20:20:51.17:985,51,0	1/1:1,25:26:72.25:1387,72,0	1/1:0,29:30:84.29:1623,84,0	1/1:1,27:28:63.22:1217,63,0	1/1:0,19:20:60.18:1123,60,0	1/1:0,35:35:96.33:1854,96,0	1/1:0,6:6:18.06:348,18,0
chr10	30705687	.	CT	C	1983.93	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=7.351;DP=549;FS=2.354;HRun=6;HaplotypeScore=88.8468;InbreedingCoeff=0.9953;MQ=74.59;MQ0=0;MQRankSum=1.013;QD=27.18;ReadPosRankSum=-0.682;VQSLOD=3.5932;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:63.20:0,63,827	0/0:10,0:10:30.10:0,30,392	0/0:11,0:11:24.06:0,24,285	0/0:11,0:11:24.04:0,24,267	0/0:19,0:19:57.19:0,57,750	0/0:25,0:25:63.12:0,63,787	0/0:15,0:15:42.11:0,42,522	0/0:33,0:33:96.29:0,96,1226	0/0:17,0:17:48.16:0,48,629	0/0:27,0:27:69.22:0,69,907	0/0:23,0:23:69.22:0,69,907	0/0:17,0:17:48.16:0,48,631	0/0:19,0:19:48.15:0,48,618	0/0:17,0:17:48.15:0,48,618	0/0:14,0:14:36.12:0,36,474	0/0:15,0:15:36.12:0,36,474	0/0:21,0:21:63.20:0,63,828	0/0:23,0:23:63.16:0,63,809	1/1:2,18:20:54.13:580,54,0	1/1:1,29:30:90.23:967,90,0	1/1:4,19:23:54.13:580,54,0	0/0:13,0:13:39.13:0,39,513	0/0:20,0:20:57.19:0,57,749	0/0:7,0:7:18.06:0,18,237	0/0:29,0:29:78.24:0,78,1011	0/0:27,0:27:72.20:0,72,905	0/0:27,0:27:78.21:0,78,1005	0/0:14,0:14:39.13:0,39,513
chr10	30705835	.	T	TTCTCTCTCTCTC	4722.94	PASS	AB=1.000;AC=41;AF=0.788;AN=52;BaseQRankSum=1.272;DP=536;FS=0.000;HRun=0;HaplotypeScore=166.5083;InbreedingCoeff=0.4403;MQ=60.94;MQ0=20;MQRankSum=-1.844;QD=12.17;ReadPosRankSum=-1.905;VQSLOD=3.6134;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:14,10:24:3.48:114,3,0	1/1:7,0:7:3.01:91,3,0	0/0:28,0:19:3.01:0,3,100	./.	1/1:28,0:28:6.01:100,6,0	1/1:25,0:22:6.49:166,6,0	1/1:29,0:27:3.95:112,4,0	0/0:18,0:18:1.25:0,1,3	1/1:17,0:16:6.49:148,6,0	1/1:12,0:11:16.30:413,16,0	1/1:21,0:21:6.01:109,6,0	1/1:15,0:12:6:51,6,0	1/1:22,0:22:17.95:440,18,0	1/1:26,0:25:7.95:123,8,0	1/1:12,0:10:3.01:95,3,0	1/1:11,0:10:5.51:49,6,0	0/0:18,0:18:25.52:0,26,843	0/0:12,0:9:15.05:0,15,501	1/1:16,0:15:13.60:361,14,0	1/1:16,0:14:5.87:125,6,0	1/1:14,0:14:12.01:174,12,0	./.	1/1:13,0:13:0.89:2,1,0	0/0:18,8:23:3:0,3,68	1/1:21,0:20:3.95:54,4,0	1/1:29,0:28:44.64:1560,45,0	1/1:18,0:17:16.81:295,17,0	0/1:11,0:8:93.50:142,0,94
chr10	30705870	.	TCACACACACACA	T	848.92	PASS	AB=0.892;AC=22;AF=0.524;AN=42;BaseQRankSum=0.664;DP=428;FS=14.075;HRun=0;HaplotypeScore=124.7381;InbreedingCoeff=0.2670;MQ=32.65;MQ0=57;MQRankSum=-1.410;QD=3.71;ReadPosRankSum=-2.862;VQSLOD=0.3852;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	1/1:4,0:4:2.84:14,3,0	./.	./.	./.	1/1:16,2:16:3.01:95,3,0	0/0:25,0:19:1.89:0,2,3	0/0:11,0:10:0.47:0,0,1	0/1:14,1:13:0:0,0,0	./.	./.	0/0:10,0:6:0.47:0,0,1	1/1:15,1:17:6:195,6,0	1/1:14,2:17:6.49:172,6,0	0/1:13,0:12:0:0,0,0	1/1:6,0:10:3.01:68,3,0	0/0:21,0:19:12.03:0,12,244	0/0:15,0:11:9.03:0,9,233	0/0:14,0:12:0:0,0,0	0/1:12,0:12:84.60:93,0,85	0/0:23,0:19:2.84:0,3,14	1/1:14,1:13:3.01:65,3,0	./.	0/1:24,0:18:0:0,0,0	0/1:15,3:17:0:0,0,0	0/1:25,1:24:93.21:125,0,93	1/1:15,0:14:2.42:94,2,0	1/1:9,0:4:3.01:36,3,0
chr10	30707120	.	G	GGTTTT	30066.78	PASS	AB=1.000;AC=41;AF=0.732;AN=56;BaseQRankSum=-11.339;DP=782;FS=0.000;HRun=0;HaplotypeScore=137.2087;InbreedingCoeff=0.9407;MQ=72.97;MQ0=0;MQRankSum=-4.294;QD=50.79;ReadPosRankSum=0.025;VQSLOD=5.1030;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,14:25:48.10:1302,48,0	1/1:3,7:10:21.07:600,21,0	0/1:28,0:28:2.29:2,0,407	0/0:35,0:29:28.93:0,29,532	1/1:11,24:38:75.21:2003,75,0	1/1:7,20:27:51.18:1460,51,0	1/1:11,8:20:36.12:1012,36,0	0/0:35,0:35:48.15:0,48,860	1/1:8,23:32:72.25:2035,72,0	1/1:17,16:34:63.22:1750,63,0	1/1:9,21:32:57.19:1581,57,0	1/1:19,14:35:45.15:1286,45,0	1/1:7,18:26:54.19:1544,54,0	1/1:9,13:23:42.14:1201,42,0	1/1:23,0:33:54.17:1122,54,0	1/1:12,22:36:72.25:2014,72,0	0/0:25,0:25:48.14:0,48,859	0/0:17,0:17:30.10:0,30,558	0/0:19,0:19:17.58:0,18,291	0/0:39,0:39:75.26:0,75,1383	0/0:20,0:20:42.14:0,42,777	1/1:16,25:42:84.24:2265,84,0	1/1:7,23:32:66.40:1848,66,0	1/1:7,18:25:60.16:1623,60,0	1/1:9,9:18:30.10:806,30,0	1/1:15,22:37:81.26:2233,81,0	1/1:10,18:28:60.21:1694,60,0	1/1:1,8:11:24.08:687,24,0
chr10	30707499	.	A	AAT	19778.85	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-11.153;DP=634;FS=2.444;HRun=0;HaplotypeScore=72.4582;InbreedingCoeff=0.9767;MQ=68.02;MQ0=4;MQRankSum=-2.142;QD=37.25;ReadPosRankSum=4.608;VQSLOD=7.1329;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,37:38:81.28:1363,81,0	1/1:0,15:15:30.10:511,30,0	0/0:12,0:11:6.91:0,7,186	0/0:12,0:11:30.05:0,30,351	1/1:0,35:35:90.17:1469,90,0	1/1:1,17:20:39.03:632,39,0	1/1:2,20:24:48.06:786,48,0	0/0:29,0:29:87.14:0,87,1011	1/1:0,13:13:30.10:513,30,0	1/1:2,15:17:48.15:778,48,0	1/1:0,22:24:47.80:682,48,0	1/1:0,21:21:48.16:821,48,0	1/1:1,19:20:39.13:659,39,0	1/1:0,19:20:51.07:836,51,0	1/1:0,22:22:42.14:718,42,0	1/1:1,13:13:30.10:513,30,0	0/0:29,0:29:83.75:0,84,1049	0/0:21,0:21:60.11:0,60,750	1/1:0,19:21:60.02:900,60,0	1/1:0,22:24:62.93:968,63,0	1/1:0,18:19:42.14:718,42,0	1/1:1,23:24:54.10:887,54,0	1/1:2,35:39:83.93:1329,84,0	1/1:1,18:20:47.90:779,48,0	1/1:1,24:25:48.03:782,48,0	1/1:0,22:24:68.98:1039,69,0	1/1:2,38:42:99:1787,105,0	1/1:2,6:7:18.06:307,18,0
chr10	30709554	.	TG	T	12210.75	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=9.983;DP=613;FS=2.335;HRun=5;HaplotypeScore=64.7849;InbreedingCoeff=0.9955;MQ=86.38;MQ0=0;MQRankSum=-3.262;QD=29.93;ReadPosRankSum=6.534;VQSLOD=4.8477;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:1,27:28:69.20:783,69,0	1/1:0,5:5:15.04:170,15,0	0/0:25,1:26:16.86:0,17,731	0/0:33,0:33:63.62:0,64,883	1/1:0,26:26:72.20:817,72,0	1/1:0,28:28:72.21:817,72,0	1/1:0,17:17:42.12:476,42,0	0/0:31,0:31:73.50:0,74,993	1/1:1,14:15:42.12:476,42,0	1/1:2,21:23:63.16:704,63,0	1/1:2,26:28:75.21:851,75,0	1/1:1,22:23:63.18:715,63,0	1/1:0,16:16:42.12:476,42,0	1/1:2,17:19:51.14:578,51,0	1/1:0,19:19:51.15:579,51,0	1/1:2,20:22:54.15:613,54,0	0/0:38,0:38:99:0,108,1437	0/0:25,0:25:72.20:0,72,949	0/0:12,0:12:33.10:0,33,435	0/0:26,0:26:75.25:0,75,1024	0/0:13,0:13:36.12:0,36,492	1/1:0,19:19:45.13:510,45,0	1/1:0,20:20:57.16:646,57,0	1/1:0,16:16:39.11:440,39,0	1/1:2,23:25:63.18:713,63,0	1/1:2,19:21:57.14:635,57,0	1/1:0,20:20:57.16:647,57,0	1/1:2,16:18:51.10:564,51,0
chr10	30709647	.	T	TG	1444.59	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-4.321;DP=626;FS=0.000;HRun=7;HaplotypeScore=68.3749;InbreedingCoeff=0.9931;MQ=75.80;MQ0=6;MQRankSum=-0.796;QD=24.91;ReadPosRankSum=-2.172;VQSLOD=3.1106;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:51.08:0,51,492	0/0:7,0:7:15.02:0,15,145	0/0:48,0:32:45.27:0,45,470	0/0:52,0:28:53.87:0,54,485	0/0:25,0:25:69.11:0,69,666	0/0:26,0:26:72.12:0,72,694	0/0:16,0:16:36.02:0,36,336	0/0:28,0:28:63.04:0,63,599	0/0:19,0:19:54.08:0,54,521	0/0:29,0:29:75.12:0,75,724	0/0:18,0:18:54.08:0,54,517	0/0:23,0:23:63.07:0,63,597	0/0:26,0:26:75.12:0,75,724	0/0:14,0:14:42.07:0,42,405	0/0:18,0:18:51.08:0,51,493	0/0:17,0:17:45.07:0,45,435	0/0:25,0:25:69.11:0,69,666	0/0:21,0:21:57.08:0,57,549	1/1:4,24:28:69.20:810,69,0	1/1:2,17:19:42.09:487,42,0	1/1:1,10:11:24.07:290,24,0	0/0:18,0:18:45.06:0,45,429	0/0:17,0:17:30.04:0,30,289	0/0:25,0:25:72.12:0,72,695	0/0:11,0:11:30.05:0,30,290	0/0:16,0:16:45.06:0,45,430	0/0:32,0:32:81.10:0,81,774	0/0:13,0:13:38.99:0,39,359
chr10	30712601	.	TCTCTGA	T	237.98	PASS	AB=0.979;AC=11;AF=0.196;AN=56;BaseQRankSum=8.225;DP=744;FS=0.000;HRun=0;HaplotypeScore=120.6086;InbreedingCoeff=-0.0903;MQ=43.41;MQ0=128;MQRankSum=-4.104;QD=0.96;ReadPosRankSum=-1.154;VQSLOD=2.0246;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,2:24:19.82:0,20,431	1/1:4,1:5:3.99:15,4,0	0/1:77,0:4:0.76:1,0,60	0/0:109,0:16:5.65:0,6,87	0/0:6,0:6:14.84:0,15,207	0/0:18,2:17:18.03:0,18,379	0/0:14,0:14:26.75:0,27,364	0/0:48,0:33:72.23:0,72,1450	0/1:22,0:16:40.15:40,0,211	0/1:22,1:17:84.37:84,0,467	0/0:13,0:9:9.38:0,9,103	0/0:27,0:22:27.09:0,27,546	0/1:25,3:24:20.02:20,0,681	0/0:18,0:13:3:0,3,388	0/0:25,0:22:19.08:0,19,684	0/1:34,0:28:18.92:19,0,636	0/0:39,0:39:79.81:0,80,2790	0/0:28,0:28:70.32:0,70,1868	0/1:19,0:10:7.19:7,0,231	0/0:13,0:13:11.94:0,12,257	0/0:40,0:35:45.02:0,45,984	0/0:16,1:10:26.97:0,27,503	0/0:17,0:10:6.02:0,6,122	0/0:20,0:15:26.81:0,27,387	0/0:12,0:9:9.03:0,9,199	0/1:18,1:15:99:149,0,269	0/1:12,0:12:14.96:15,0,203	0/1:10,0:7:25.49:25,0,83
chr10	30712607	.	ACTCTCTGT	A	3467.31	PASS	AB=0.903;AC=28;AF=0.609;AN=46;BaseQRankSum=-0.085;DP=725;FS=1.280;HRun=0;HaplotypeScore=119.2820;InbreedingCoeff=0.0793;MQ=42.54;MQ0=131;MQRankSum=0.720;QD=7.67;ReadPosRankSum=4.406;VQSLOD=2.0743;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:25,4:24:10.16:199,10,0	1/1:3,2:5:1.25:73,1,0	0/0:73,0:2:2.22:0,2,7	0/1:100,0:10:0.27:0,0,6	1/1:5,0:5:6.02:97,6,0	./.	0/1:17,0:17:99:200,0,114	0/0:44,0:29:45.15:0,45,881	1/1:16,3:13:12.04:273,12,0	0/1:21,2:16:29.14:272,0,29	0/1:7,6:9:36.99:37,0,41	./.	0/1:25,3:24:44.16:380,0,44	1/1:15,3:13:8.97:178,9,0	0/1:23,3:23:99:179,0,385	0/1:28,3:25:4.03:209,0,4	0/0:37,0:37:75.16:0,75,2431	0/0:27,0:27:49.96:0,50,1449	0/1:16,6:10:4.98:179,0,5	./.	0/1:40,0:35:0.26:44,0,0	1/1:16,0:9:3.01:50,3,0	./.	1/1:19,0:14:15.05:254,15,0	./.	0/1:17,1:14:99:282,0,137	1/1:7,4:11:18.06:350,18,0	1/1:9,1:7:11.95:213,12,0
chr10	30712624	.	C	CTCTCTG	2057.85	PASS	AB=0.998;AC=18;AF=0.360;AN=50;BaseQRankSum=-0.334;DP=742;FS=3.503;HRun=0;HaplotypeScore=121.5984;InbreedingCoeff=-0.4513;MQ=38.98;MQ0=119;MQRankSum=2.937;QD=5.16;ReadPosRankSum=1.281;VQSLOD=2.4427;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:32,0:27:40.10:168,0,40	0/0:7,0:7:7.20:0,7,58	0/1:75,0:7:23.44:23,0,73	0/0:104,0:7:6.41:0,6,60	0/1:6,0:6:33.84:85,0,34	0/0:21,0:18:3.01:0,3,53	0/1:20,0:18:99:197,0,108	0/0:41,0:25:61.44:0,61,1068	0/1:26,1:22:46.47:229,0,46	0/1:28,0:20:99:151,0,390	0/1:13,0:9:17.06:17,0,23	./.	0/1:22,0:20:72.08:295,0,72	1/1:14,0:10:9.03:140,9,0	0/1:25,0:22:99:135,0,243	0/1:30,0:24:99:124,0,152	0/0:35,0:35:84.29:0,84,1687	0/0:25,0:25:45.32:0,45,1079	0/1:21,0:12:76.72:77,0,87	./.	0/0:29,12:36:21.17:0,21,307	0/1:13,0:8:14.91:44,0,15	./.	0/1:19,0:16:95.33:159,0,95	0/0:14,0:10:3.01:0,3,53	0/1:28,0:22:99:139,0,561	0/1:14,0:14:74.54:101,0,75	0/1:12,0:9:27.79:125,0,28
chr10	30712682	.	GTC	G	2711.74	PASS	AB=0.718;AC=24;AF=0.429;AN=56;BaseQRankSum=2.828;DP=724;FS=10.293;HRun=0;HaplotypeScore=82.3790;InbreedingCoeff=-0.1127;MQ=37.12;MQ0=118;MQRankSum=1.855;QD=7.51;ReadPosRankSum=-0.896;VQSLOD=2.0579;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:12,20:29:99:100,0,130	0/1:3,4:7:44.20:73,0,44	0/0:91,2:3:6.27:0,6,63	0/0:120,0:5:1.70:0,2,67	0/0:7,6:9:3.01:0,3,53	1/1:12,2:11:14.98:182,15,0	0/1:9,9:15:0:0,0,0	0/0:31,0:23:69.22:0,69,1170	0/1:15,19:27:74.99:228,0,75	0/1:14,5:15:99:324,0,135	1/1:9,1:8:4.56:44,5,0	1/1:17,6:17:22.73:327,23,0	0/1:13,11:20:90.88:237,0,91	0/1:9,16:17:31.79:225,0,32	1/1:8,8:14:9.01:160,9,0	0/1:14,6:18:99:184,0,134	0/0:18,0:17:45.77:0,46,749	0/0:19,0:19:50.96:0,51,828	0/0:19,0:13:39.10:0,39,631	0/0:5,0:5:12.04:0,12,213	0/0:39,6:40:1.85:0,2,1258	1/1:2,7:8:2.90:41,3,0	0/1:10,0:8:35.15:35,0,47	0/1:9,19:23:99:173,0,286	0/1:12,1:9:9.82:34,0,10	0/1:21,7:24:99:302,0,527	0/1:8,9:16:96.79:97,0,273	0/1:7,6:11:41.17:111,0,41
chr10	30715941	.	A	AAAGCATCC	5048.26	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-3.851;DP=744;FS=11.506;HRun=0;HaplotypeScore=178.7454;InbreedingCoeff=0.9984;MQ=88.47;MQ0=0;MQRankSum=-8.929;QD=69.15;ReadPosRankSum=-3.283;VQSLOD=3.4358;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,121,3306	0/0:19,0:19:51.18:0,51,1377	0/0:30,0:30:63.17:0,63,1473	0/0:25,0:25:50.76:0,51,1134	0/0:25,0:25:63.20:0,63,1606	0/0:15,0:15:39.13:0,39,1018	0/0:40,0:40:99:0,105,2507	0/0:27,0:27:69.20:0,69,1570	0/0:24,0:24:66.23:0,66,1763	0/0:35,0:35:90.29:0,90,2232	0/0:23,0:23:60.11:0,60,1470	0/0:22,0:22:60.21:0,60,1564	0/0:26,0:26:75.21:0,75,1748	0/0:38,0:38:99:0,102,2507	0/0:29,0:29:84.26:0,84,2121	0/0:16,0:16:48.16:0,48,1270	0/0:35,0:35:84.26:0,84,2087	0/0:21,0:21:57.10:0,57,1326	1/1:9,19:28:78.24:2759,78,0	1/1:4,7:13:21.07:701,21,0	1/1:10,19:32:42.06:1587,42,0	0/0:24,0:24:60.17:0,60,1394	0/0:19,0:19:51.16:0,51,1293	0/0:38,0:38:99:0,108,2580	0/0:31,0:31:78.22:0,78,1946	0/0:25,0:25:66.22:0,66,1737	0/0:23,0:23:51.16:0,51,1310	0/0:11,0:11:33.11:0,33,895
chr10	30717006	.	C	CAG	3518.68	PASS	AB=0.773;AC=30;AF=0.600;AN=50;BaseQRankSum=-2.927;DP=514;FS=3.197;HRun=0;HaplotypeScore=103.2508;InbreedingCoeff=-0.4851;MQ=52.08;MQ0=22;MQRankSum=0.985;QD=9.67;ReadPosRankSum=-1.485;VQSLOD=2.9551;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:14,10:25:71.50:242,0,72	1/1:7,1:7:3.01:40,3,0	./.	./.	0/1:12,7:19:8.77:271,0,9	0/1:9,1:10:23.81:79,0,24	0/1:13,7:21:14.80:204,0,15	0/1:16,0:16:20.85:72,0,21	0/1:10,4:17:88.71:135,0,89	0/1:12,5:19:51.62:200,0,52	0/1:8,4:13:2.10:102,0,2	1/1:9,1:18:15.48:150,15,0	0/1:4,6:13:7.24:177,0,7	1/1:6,4:10:12.04:171,12,0	0/0:8,0:22:28.41:0,28,139	0/1:14,5:19:99:213,0,135	0/1:10,4:16:47.64:143,0,48	0/1:6,4:9:11.41:122,0,11	1/1:19,0:20:13.26:128,13,0	1/1:16,0:16:3:26,3,0	./.	1/1:9,0:9:9.01:84,9,0	0/1:8,6:14:71.97:113,0,72	0/1:8,3:11:2.09:123,0,2	0/1:8,4:13:55.75:200,0,56	0/1:14,8:23:34.74:284,0,35	0/1:12,5:18:17.79:162,0,18	0/1:4,0:4:53.65:77,0,54
chr10	30718174	.	T	TA	1710.62	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=1.042;DP=642;FS=2.401;HRun=6;HaplotypeScore=62.8180;InbreedingCoeff=0.9460;MQ=80.40;MQ0=0;MQRankSum=-4.656;QD=28.99;ReadPosRankSum=-2.760;VQSLOD=3.2180;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:69.13:0,69,695	0/0:9,0:9:21.03:0,21,207	0/0:15,0:15:5.19:0,5,269	0/0:20,0:20:12.59:0,13,260	0/0:39,0:39:99:0,117,1179	0/0:32,0:32:90.08:0,90,882	0/0:21,0:21:48.11:0,48,490	0/0:31,0:31:75.13:0,75,742	0/0:26,0:26:75.13:0,75,749	0/0:25,0:25:75.17:0,75,765	0/0:24,0:24:69.10:0,69,681	0/0:23,0:23:63.13:0,63,636	0/0:19,0:19:54.12:0,54,550	0/0:16,0:16:45.09:0,45,454	0/0:28,0:28:72.13:0,72,720	0/0:19,0:19:57.12:0,57,575	0/0:21,0:21:63.12:0,63,634	0/0:21,0:21:63.12:0,63,635	1/1:6,16:22:57.16:694,57,0	1/1:5,20:25:63.20:792,63,0	1/1:3,9:12:33:367,33,0	0/0:20,0:20:54.12:0,54,551	0/0:30,0:30:84.18:0,84,851	0/0:11,0:11:30.06:0,30,306	0/0:29,0:29:87.17:0,87,875	0/0:33,0:33:93.21:0,93,949	0/0:40,0:40:93.19:0,93,941	0/0:7,0:7:21.05:0,21,214
chr10	30718208	.	GA	G	1418.84	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=10.407;DP=643;FS=1.090;HRun=8;HaplotypeScore=67.0319;InbreedingCoeff=0.9845;MQ=76.52;MQ0=0;MQRankSum=-3.824;QD=22.88;ReadPosRankSum=-1.906;VQSLOD=3.4889;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:69.21:0,69,834	0/0:14,0:14:42.13:0,42,507	0/0:15,0:15:36.10:0,36,418	0/0:18,0:19:12.62:0,13,312	0/0:39,0:39:99:0,108,1304	0/0:32,0:32:96.28:0,96,1145	0/0:19,0:19:57.16:0,57,677	0/0:37,0:37:96.28:0,96,1140	0/0:24,0:24:60.18:0,60,715	0/0:28,0:28:75.21:0,75,887	0/0:21,0:21:60.17:0,60,710	0/0:23,0:23:63.19:0,63,761	0/0:19,0:19:54.16:0,54,649	0/0:23,0:23:66.20:0,66,794	0/0:28,0:28:72.22:0,72,869	0/0:19,0:19:57.17:0,57,688	0/0:22,0:22:57.17:0,57,686	0/0:20,0:20:54.17:0,54,652	1/1:3,18:21:54.08:521,54,0	1/1:3,26:29:75.11:723,75,0	1/1:1,11:12:33.05:317,33,0	0/0:22,0:22:66.20:0,66,797	0/0:26,0:26:72.22:0,72,870	0/0:12,0:12:30.09:0,30,362	0/0:24,0:24:66.20:0,66,788	0/0:30,0:30:81.25:0,81,978	0/0:35,0:35:84.24:0,84,992	0/0:5,0:5:15.05:0,15,181
chr10	30718512	.	GC	G	18263.38	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=9.544;DP=720;FS=1.370;HRun=3;HaplotypeScore=74.2570;InbreedingCoeff=0.9875;MQ=81.62;MQ0=0;MQRankSum=-1.544;QD=34.46;ReadPosRankSum=7.150;VQSLOD=4.5845;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,36:37:96.30:1190,96,0	1/1:0,6:6:15.05:186,15,0	0/0:25,0:25:69.12:0,69,900	0/0:16,0:16:42.01:0,42,577	1/1:0,36:36:99:1264,102,0	1/1:0,31:31:90.24:1095,90,0	1/1:1,11:12:33.10:409,33,0	0/0:32,0:32:93.26:0,93,1228	1/1:0,27:27:78.25:967,78,0	1/1:0,42:42:99:1486,120,0	1/1:0,23:23:66.21:818,66,0	1/1:0,31:31:81.25:1004,81,0	1/1:0,26:26:69.22:855,69,0	1/1:0,24:24:63.20:781,63,0	1/1:0,33:33:93.29:1153,93,0	1/1:0,32:32:93.29:1153,93,0	0/0:9,0:9:27.06:0,27,367	0/0:31,0:31:93.31:0,93,1328	0/0:18,0:18:48.11:0,48,650	0/0:36,0:36:99:0,108,1552	0/0:23,0:23:69.23:0,69,992	1/1:0,29:29:81.21:986,81,0	1/1:1,24:25:60.19:744,60,0	1/1:0,22:22:60.19:744,60,0	1/1:0,23:23:69.22:855,69,0	1/1:1,30:31:93.25:1122,93,0	1/1:0,37:37:99:1339,108,0	1/1:0,3:3:9.03:112,9,0
chr10	30720586	.	C	CAGTCTACAGTA	75636.41	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-5.228;DP=763;FS=13.042;HRun=0;HaplotypeScore=238.3616;InbreedingCoeff=0.9984;MQ=75.22;MQ0=1;MQRankSum=-16.354;QD=120.44;ReadPosRankSum=4.796;VQSLOD=4.0062;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:16,20:40:87.21:4584,87,0	1/1:4,10:16:35.71:2035,36,0	0/0:27,0:28:31.85:0,32,2074	0/0:28,0:28:72.25:0,72,2398	1/1:9,21:31:69.19:3758,69,0	1/1:11,7:23:39.06:1842,39,0	1/1:14,13:29:75.26:4113,75,0	0/0:35,0:35:96.32:0,96,3214	1/1:13,15:32:78.23:4200,78,0	1/1:17,15:34:87.24:4328,87,0	1/1:12,13:28:60.03:2689,60,0	1/1:8,18:27:78.27:4249,78,0	1/1:9,20:34:84.22:4572,84,0	1/1:13,20:35:84.25:4615,84,0	1/1:12,18:31:90.24:4737,90,0	1/1:16,14:34:75.15:3821,75,0	0/0:20,0:20:51.17:0,51,1844	0/0:24,0:24:72.25:0,72,2609	1/1:6,6:19:45.11:1625,45,0	1/1:8,11:22:54.10:2657,54,0	1/1:9,3:14:21.07:1115,21,0	1/1:13,17:35:83.99:3591,84,0	1/1:10,11:24:54.10:2589,54,0	1/1:18,8:29:51.14:2663,51,0	1/1:10,14:26:57.15:3071,57,0	1/1:13,11:25:69.20:3478,69,0	1/1:10,16:31:75.18:3908,75,0	1/1:1,7:8:24.08:1395,24,0
chr10	30720745	.	AGGTAG	A	3115.61	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=10.130;DP=665;FS=8.403;HRun=0;HaplotypeScore=123.5645;InbreedingCoeff=0.9780;MQ=82.03;MQ0=0;MQRankSum=-2.813;QD=46.50;ReadPosRankSum=1.887;VQSLOD=3.5800;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,141,4459	0/0:7,0:7:21.07:0,21,666	0/0:28,0:28:75.26:0,75,2256	0/0:14,0:14:42.14:0,42,1219	0/0:21,0:21:60.21:0,60,1871	0/0:20,0:20:57.20:0,57,1755	0/0:33,0:33:96.31:0,96,2926	0/0:39,0:39:99:0,114,3454	0/0:30,0:30:84.29:0,84,2647	0/0:22,0:22:66.23:0,66,2012	0/0:17,0:17:45.15:0,45,1421	0/0:40,0:40:99:0,111,3375	0/0:31,0:31:84.29:0,84,2543	0/0:24,0:24:69.24:0,69,2093	0/0:30,0:30:81.28:0,81,2490	0/0:23,0:23:66.23:0,66,2066	0/0:22,0:22:66.23:0,66,2073	0/0:26,0:26:75.26:0,75,2281	1/1:2,14:16:36.12:728,36,0	1/1:0,16:16:42.14:908,42,0	1/1:0,35:35:75.26:1622,75,0	0/0:24,0:24:72.25:0,72,2262	0/0:12,0:12:36.12:0,36,1088	0/0:26,0:26:69.24:0,69,2082	0/0:23,0:23:69.24:0,69,2142	0/0:20,0:20:57.20:0,57,1772	0/0:12,0:12:36.12:0,36,1104	0/0:4,0:4:9.03:0,9,285
chr10	30720992	.	TACACACAC	T	3814.17	PASS	AB=0.979;AC=37;AF=0.685;AN=54;BaseQRankSum=5.718;DP=578;FS=25.832;HRun=0;HaplotypeScore=164.8142;InbreedingCoeff=0.3428;MQ=64.63;MQ0=16;MQRankSum=-1.339;QD=9.93;ReadPosRankSum=2.621;VQSLOD=1.2398;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:27,5:30:18.06:398,18,0	1/1:9,0:9:2.83:68,3,0	./.	0/0:36,0:24:6.02:0,6,85	1/1:16,0:16:5.85:107,6,0	1/1:13,0:13:1.58:125,2,0	1/1:22,1:22:14.70:336,15,0	0/0:41,0:41:32.25:0,32,621	1/1:26,0:26:21.52:411,22,0	1/1:10,1:11:3.01:75,3,0	1/1:14,0:14:6.02:108,6,0	0/1:15,0:17:68.73:122,0,69	0/1:10,0:10:9:9,0,32	0/1:22,0:22:47.52:257,0,48	0/0:20,0:23:39.13:0,39,1335	0/1:20,0:20:10.23:120,0,10	0/0:19,0:18:30.10:0,30,845	0/0:17,0:19:39.07:0,39,1002	1/1:17,0:15:5.65:76,6,0	1/1:7,0:6:6.02:81,6,0	1/1:29,0:27:8.76:142,9,0	0/0:15,0:21:2.99:0,3,24	0/1:19,0:19:34.86:70,0,35	1/1:21,2:28:3.18:242,3,0	1/1:18,1:19:12.04:252,12,0	1/1:20,2:21:18.05:354,18,0	1/1:21,1:22:24.04:437,24,0	1/1:8,0:8:3:25,3,0
chr10	30721030	.	CACA	C	2791.54	PASS	AB=0.956;AC=31;AF=0.574;AN=54;BaseQRankSum=5.393;DP=494;FS=35.382;HRun=0;HaplotypeScore=116.1851;InbreedingCoeff=0.3045;MQ=38.48;MQ0=77;MQRankSum=-3.635;QD=9.93;ReadPosRankSum=0.405;VQSLOD=0.9933;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:19:19.37:202,19,0	0/1:5,0:5:28.04:33,0,28	0/0:38,0:6:11.59:0,12,142	0/0:52,0:14:36.77:0,37,445	1/1:6,0:5:5.83:65,6,0	1/1:13,1:11:3.02:114,3,0	0/1:20,0:17:97.49:177,0,97	0/0:30,0:28:10.53:0,11,778	1/1:10,1:10:1.43:152,1,0	0/0:9,0:6:3.19:0,3,79	1/1:3,0:3:3.01:42,3,0	0/1:21,3:21:54.50:279,0,55	0/1:18,0:16:33.38:44,0,33	1/1:14,5:18:2.04:398,2,0	0/0:29,0:25:66.08:0,66,1167	0/1:9,2:12:13.57:248,0,14	0/0:23,0:23:62.53:0,63,936	0/0:20,0:20:42.24:0,42,792	1/1:14,0:14:14.85:133,15,0	1/1:5,2:5:9.01:106,9,0	1/1:24,3:18:11.91:169,12,0	./.	1/1:11,1:12:11.77:134,12,0	1/1:29,3:25:25.02:298,25,0	1/1:10,2:11:12.32:142,12,0	0/1:15,0:12:34.77:123,0,35	0/1:7,0:7:0.73:109,0,1	0/0:3,0:3:4.20:0,4,22
chr10	30721040	.	CACCACCACCACT	C	3448.16	PASS	AB=0.943;AC=31;AF=0.574;AN=54;BaseQRankSum=8.876;DP=540;FS=24.470;HRun=0;HaplotypeScore=159.6769;InbreedingCoeff=0.5515;MQ=43.10;MQ0=69;MQRankSum=-6.821;QD=12.40;ReadPosRankSum=3.411;VQSLOD=0.7648;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:20,1:20:5.55:124,6,0	1/1:7,0:7:4.27:89,4,0	0/0:45,0:10:26.43:0,26,860	0/0:53,0:18:50.84:0,51,1911	1/1:5,0:5:7.75:45,8,0	0/1:15,1:13:31.05:102,0,31	0/1:22,2:20:55.95:356,0,56	0/0:30,0:28:67.47:0,67,2753	1/1:12,1:11:9.79:184,10,0	1/1:16,0:13:30.04:330,30,0	1/1:3,0:3:2.96:19,3,0	1/1:21,2:20:20.31:285,20,0	1/1:21,0:19:16.47:193,16,0	0/1:19,4:22:0.15:378,0,0	0/0:31,0:27:69.20:0,69,2914	1/1:10,2:12:13.90:289,14,0	0/0:15,0:15:43.03:0,43,2178	0/0:18,0:18:38.92:0,39,1774	0/0:18,0:18:40.30:0,40,1204	0/0:12,0:11:15.85:0,16,458	0/0:32,0:24:23.39:0,23,382	./.	1/1:11,1:12:5.14:39,5,0	1/1:35,3:31:9.32:203,9,0	1/1:12,1:13:10.15:204,10,0	0/1:14,0:12:12.50:248,0,13	1/1:11,3:14:13.38:319,13,0	0/1:3,0:3:8.86:41,0,9
chr10	30721043	.	CACCACCACT	C	4748.40	PASS	AB=0.583;AC=37;AF=0.661;AN=56;BaseQRankSum=7.731;DP=541;FS=23.583;HRun=0;HaplotypeScore=138.2636;InbreedingCoeff=0.7584;MQ=45.51;MQ0=65;MQRankSum=-7.041;QD=16.90;ReadPosRankSum=2.377;VQSLOD=2.5378;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:9,12:20:8.40:123,8,0	1/1:0,7:7:8.96:190,9,0	0/0:48,0:12:32.77:0,33,729	0/0:56,0:19:53.97:0,54,1520	1/1:1,4:6:5.85:40,6,0	1/1:7,9:13:5.92:105,6,0	0/1:6,15:19:18.79:492,0,19	0/0:30,0:28:73.40:0,73,2087	1/1:5,7:11:9.03:228,9,0	1/1:4,13:15:35.97:597,36,0	1/1:0,3:3:2.96:19,3,0	1/1:10,13:20:20.94:416,21,0	1/1:5,16:19:17.90:316,18,0	1/1:9,12:20:17.97:459,18,0	0/0:32,0:28:57.18:0,57,2109	1/1:2,9:11:17.95:379,18,0	0/0:15,0:15:42.14:0,42,1682	0/0:16,0:16:25.89:0,26,1308	0/0:18,0:18:38.79:0,39,845	0/0:12,0:11:14.73:0,15,340	0/0:33,0:26:30.02:0,30,321	1/1:8,0:7:3:27,3,0	1/1:3,9:12:5.51:39,6,0	1/1:23,14:30:8.70:189,9,0	1/1:5,7:12:11.13:195,11,0	1/1:12,5:15:26.92:488,27,0	1/1:4,9:13:12.04:339,12,0	1/1:0,3:3:5.99:107,6,0
chr10	30722391	.	T	TG	3486.56	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.763;DP=789;FS=0.427;HRun=1;HaplotypeScore=91.7506;InbreedingCoeff=0.9764;MQ=88.15;MQ0=0;MQRankSum=-2.650;QD=37.09;ReadPosRankSum=0.404;VQSLOD=3.7232;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,156,1993	0/0:6,0:6:18.06:0,18,234	0/0:26,0:26:68.69:0,69,872	0/0:30,0:31:63.87:0,64,851	0/0:20,0:20:57.17:0,57,726	0/0:27,0:27:78.25:0,78,1013	0/0:34,0:34:96.28:0,96,1215	0/0:38,0:38:99:0,108,1356	0/0:28,0:28:81.26:0,81,1051	0/0:36,0:36:99:0,102,1325	0/0:14,0:14:36.12:0,36,467	0/0:30,0:30:87.28:0,87,1130	0/0:37,0:37:99:0,108,1386	0/0:33,0:33:96.29:0,96,1230	0/0:43,0:43:99:0,129,1662	0/0:35,0:35:99:0,99,1271	0/0:25,0:25:72.18:0,72,889	0/0:10,0:10:27.07:0,27,336	1/1:1,21:22:60.18:861,60,0	1/1:4,22:26:66.18:963,66,0	1/1:8,38:46:99:1663,111,0	0/0:22,0:22:66.21:0,66,854	0/0:19,0:19:57.13:0,57,709	0/0:36,0:36:99:0,105,1332	0/0:17,0:17:51.16:0,51,649	0/0:36,0:36:99:0,105,1364	0/0:37,0:37:99:0,111,1441	0/0:3,0:3:9.03:0,9,117
chr10	30722597	.	G	GTT	1727.75	PASS	AB=0.627;AC=32;AF=0.571;AN=56;BaseQRankSum=2.738;DP=623;FS=0.000;HRun=11;HaplotypeScore=99.3693;InbreedingCoeff=0.4424;MQ=72.37;MQ0=5;MQRankSum=3.195;QD=4.02;ReadPosRankSum=2.405;VQSLOD=-0.7538;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,1:39:40.67:281,41,0	1/1:1,0:8:14.70:50,15,0	0/0:44,0:21:3.69:0,4,124	0/1:30,0:14:15.35:15,0,90	0/1:6,0:25:18.30:76,0,18	1/1:8,0:24:19.37:99,19,0	0/0:19,0:18:41.84:0,42,390	1/1:17,0:38:19.25:139,19,0	1/1:2,0:16:19.68:68,20,0	1/1:3,0:23:41.77:192,42,0	0/1:5,0:18:3.61:49,0,4	0/1:5,0:22:28.27:54,0,28	0/1:3,0:16:8.60:40,0,9	1/1:5,1:20:17.67:95,18,0	0/0:17,0:18:27.05:0,27,262	1/1:6,8:15:14.15:158,14,0	0/0:20,0:22:47.45:0,47,423	0/0:25,0:28:44.46:0,44,442	0/0:18,0:20:41.47:0,41,354	0/0:30,0:30:50.56:0,51,457	0/0:11,0:11:20.99:0,21,197	0/1:6,0:22:0.91:68,0,1	0/1:8,1:23:18.32:112,0,18	0/1:4,0:17:10.75:44,0,11	1/1:1,0:15:20.27:73,20,0	1/1:8,1:25:16.13:175,16,0	1/1:3,0:21:20.86:105,21,0	1/1:4,0:13:9.86:34,10,0
chr10	30722610	.	CT	C	1009.79	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-3.107;DP=618;FS=0.563;HRun=10;HaplotypeScore=86.0540;InbreedingCoeff=0.9452;MQ=65.26;MQ0=11;MQRankSum=0.432;QD=13.65;ReadPosRankSum=0.555;VQSLOD=3.7966;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:93.22:0,93,1011	0/0:9,0:9:21.02:0,21,218	0/0:47,0:16:20.39:0,20,151	0/0:40,1:15:8.94:0,9,129	0/0:25,0:25:48.10:0,48,511	0/0:22,0:22:42.03:0,42,430	0/0:18,0:18:41.25:0,41,395	0/0:25,0:25:30.06:0,30,311	0/0:16,0:16:30.06:0,30,315	0/0:26,0:25:51.59:0,52,552	0/0:16,0:16:33.53:0,34,344	0/0:22,0:22:28.91:0,29,427	0/0:17,0:17:33.06:0,33,353	0/0:23,0:23:39.08:0,39,415	1/1:2,14:16:32.97:282,33,0	0/0:14,0:15:30.35:0,30,289	0/0:22,1:23:34.07:0,34,578	0/0:26,1:27:63.14:0,63,672	1/1:11,8:19:41.91:349,42,0	1/1:6,24:29:47.91:408,48,0	1/1:3,6:9:14.99:130,15,0	0/0:17,0:17:30.08:0,30,331	0/0:21,0:21:57.14:0,57,615	0/0:16,0:16:27.07:0,27,295	0/0:16,0:16:30.06:0,30,320	0/0:28,0:28:54.12:0,54,578	0/0:22,0:21:7.08:0,7,296	0/0:11,0:10:12.48:0,12,123
chr10	30723125	.	AG	A	1654.32	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=9.037;DP=542;FS=1.642;HRun=8;HaplotypeScore=54.1876;InbreedingCoeff=0.9847;MQ=67.81;MQ0=13;MQRankSum=-0.479;QD=21.77;ReadPosRankSum=-0.162;VQSLOD=3.7179;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:87.22:0,87,1012	0/0:6,0:5:12.04:0,12,145	0/0:27,0:14:27.40:0,27,248	0/0:24,0:9:23.97:0,24,245	0/0:20,0:20:60.13:0,60,677	0/0:22,0:22:57.17:0,57,688	0/0:9,0:9:15.05:0,15,181	0/0:30,0:29:48.08:0,48,539	0/0:20,0:20:54.16:0,54,642	0/0:21,0:21:57.97:0,58,659	0/0:19,0:19:51.12:0,51,582	0/0:15,0:15:42.13:0,42,507	0/0:17,0:17:48.12:0,48,557	0/0:16,0:16:42.08:0,42,461	1/1:3,17:20:48.07:463,48,0	0/0:17,0:17:42.11:0,42,487	0/0:19,0:19:48.08:0,48,538	0/0:21,0:21:63.12:0,63,726	1/1:8,8:15:42.01:385,42,0	1/1:1,24:25:69.02:647,69,0	1/1:3,12:15:33.05:319,33,0	0/0:10,0:10:27.07:0,27,313	0/0:18,0:18:48.15:0,48,579	0/0:17,0:17:36.11:0,36,434	0/0:25,0:25:72.20:0,72,847	0/0:25,0:25:63.02:0,63,729	0/0:25,0:25:69.05:0,69,778	0/0:11,0:11:20.96:0,21,209
chr10	30723218	.	GA	G	982.78	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=7.520;DP=498;FS=5.876;HRun=9;HaplotypeScore=59.2055;InbreedingCoeff=0.9941;MQ=74.26;MQ0=4;MQRankSum=-2.387;QD=17.87;ReadPosRankSum=0.052;VQSLOD=3.6415;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:82.91:0,83,1007	0/0:9,0:9:24.07:0,24,277	0/0:35,0:20:47.49:0,47,464	0/0:31,0:19:38.82:0,39,361	0/0:26,0:26:63.19:0,63,727	0/0:19,0:19:48.13:0,48,545	0/0:12,0:12:33.10:0,33,381	0/0:26,1:27:40.23:0,40,673	0/0:12,0:12:33.98:0,34,382	0/0:16,0:16:48.13:0,48,539	0/0:13,0:13:36.10:0,36,407	0/0:10,0:10:27.08:0,27,311	0/0:14,0:13:33.09:0,33,372	0/0:9,0:9:18.05:0,18,208	0/0:0,0:11:31.25:0,31,159	0/0:15,0:15:45.13:0,45,519	0/0:19,0:19:54.16:0,54,623	0/0:21,0:21:57.17:0,57,656	1/1:8,14:21:42.01:384,42,0	1/1:6,16:22:54.02:494,54,0	1/1:4,7:11:27.01:247,27,0	0/0:9,0:9:24.07:0,24,273	0/0:22,0:22:57.17:0,57,656	0/0:15,0:15:42.12:0,42,478	0/0:14,0:14:29.91:0,30,318	0/0:15,0:15:33.10:0,33,381	0/0:19,0:19:54.16:0,54,623	0/0:16,0:16:42.12:0,42,483
chr10	30724756	.	G	GTCTC	1632.61	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-7.725;DP=664;FS=16.754;HRun=0;HaplotypeScore=112.1180;InbreedingCoeff=0.9612;MQ=80.93;MQ0=0;MQRankSum=-1.088;QD=58.31;ReadPosRankSum=1.589;VQSLOD=4.0291;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:56:99:0,132,2203	0/0:12,0:12:33.11:0,33,562	0/0:40,0:37:51.17:0,51,825	0/0:26,0:25:41.85:0,42,592	0/0:19,0:19:42.12:0,42,664	0/0:22,0:22:63.17:0,63,1036	0/0:27,0:27:75.26:0,75,1265	0/0:33,0:33:63.19:0,63,998	0/0:21,0:21:60.20:0,60,1013	0/0:19,0:19:48.16:0,48,817	0/0:15,0:15:42.11:0,42,660	0/0:23,0:23:66.23:0,66,1119	0/0:22,0:22:54.18:0,54,921	0/0:19,0:19:45.12:0,45,725	1/1:3,23:28:69.24:1727,69,0	0/0:25,0:25:63.21:0,63,1075	0/0:35,0:36:99:0,102,1653	0/0:28,0:28:69.22:0,69,1150	0/0:16,0:16:36.12:0,36,602	0/0:14,0:14:36.12:0,36,614	0/0:23,0:24:17.66:0,18,898	0/0:16,0:16:36.08:0,36,534	0/0:14,0:14:33.11:0,33,554	0/0:22,0:22:57.19:0,57,954	0/0:28,0:28:75.26:0,75,1275	0/0:23,0:23:66.22:0,66,1102	0/0:26,0:26:69.22:0,69,1134	0/0:9,0:9:12.04:0,12,205
chr10	30725862	.	GA	G	2765.11	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=7.498;DP=594;FS=20.951;HRun=6;HaplotypeScore=61.1492;InbreedingCoeff=0.9985;MQ=87.65;MQ0=0;MQRankSum=-2.338;QD=27.38;ReadPosRankSum=0.265;VQSLOD=1.8501;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,108,1391	0/0:7,0:7:21.07:0,21,276	0/0:25,0:25:66.20:0,66,840	0/0:17,0:17:41.28:0,41,522	0/0:16,0:16:48.16:0,48,628	0/0:23,0:23:69.21:0,69,894	0/0:11,0:11:33.06:0,33,415	0/0:28,0:28:84.26:0,84,1081	0/0:23,0:23:66.21:0,66,868	0/0:19,0:19:54.17:0,54,689	0/0:11,0:11:30.10:0,30,388	0/0:26,0:26:72.23:0,72,943	0/0:24,0:24:63.20:0,63,829	0/0:21,0:21:57.17:0,57,734	1/1:3,22:25:66.17:709,66,0	0/0:16,0:16:39.13:0,39,513	0/0:37,0:37:99:0,105,1349	0/0:24,0:24:69.22:0,69,907	1/1:2,21:23:63.14:669,63,0	1/1:0,18:18:51.13:548,51,0	1/1:3,32:35:93.23:999,93,0	0/0:15,0:15:33.10:0,33,422	0/0:13,0:13:36.12:0,36,474	0/0:21,0:21:57.17:0,57,734	0/0:15,0:15:42.13:0,42,538	0/0:24,0:24:69.20:0,69,861	0/0:26,0:26:75.24:0,75,986	0/0:14,0:14:42.14:0,42,553
chr10	30726602	.	A	AT	367.30	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=0.109;DP=630;FS=4.385;HRun=10;HaplotypeScore=65.1482;InbreedingCoeff=0.8613;MQ=74.72;MQ0=0;MQRankSum=-1.711;QD=15.30;ReadPosRankSum=-0.719;VQSLOD=3.8331;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:39:85.91:0,86,696	0/0:19,1:21:17.97:0,18,341	0/0:17,0:16:10.48:0,10,223	0/0:15,0:15:10.27:0,10,167	0/0:29,0:29:58.98:0,59,491	0/0:21,0:21:47.90:0,48,394	0/0:15,1:17:8.92:0,9,259	0/0:28,1:29:30.92:0,31,459	0/0:22,0:22:62.91:0,63,514	0/0:24,0:24:62.92:0,63,517	0/0:22,0:22:41.90:0,42,344	0/0:26,0:26:59.91:0,60,492	0/0:23,0:23:59.92:0,60,492	0/0:21,0:21:50.91:0,51,419	1/1:3,20:24:44.95:462,45,0	0/0:24,0:24:62.88:0,63,514	0/0:28,0:28:68.88:0,69,562	0/0:24,0:24:62.87:0,63,512	0/0:16,0:16:38.93:0,39,317	0/0:26,0:28:72.97:0,73,578	0/0:8,0:8:20.97:0,21,172	0/0:18,0:19:46.96:0,47,375	0/0:23,0:24:42.56:0,43,456	0/0:14,0:15:34.98:0,35,277	0/0:22,0:23:61.92:0,62,496	0/0:23,0:23:53.90:0,54,438	0/0:23,0:23:59.91:0,60,493	0/0:25,0:25:71.88:0,72,586
chr10	30726811	.	CAT	C	1256.31	PASS	AB=0.981;AC=9;AF=0.161;AN=56;BaseQRankSum=0.965;DP=686;FS=9.523;HRun=0;HaplotypeScore=156.4170;InbreedingCoeff=0.4084;MQ=61.71;MQ0=11;MQRankSum=-0.853;QD=7.48;ReadPosRankSum=-3.669;VQSLOD=1.9824;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:55.14:0,55,715	0/0:7,0:7:5.02:0,5,31	0/0:29,0:15:35.42:0,35,428	0/0:46,0:28:45.71:0,46,677	0/0:27,0:27:26.54:0,27,246	0/0:23,0:23:34.46:0,34,235	0/0:28,0:28:63.12:0,63,505	0/1:34,4:36:99:116,0,804	0/0:19,0:19:14.42:0,14,194	0/0:27,0:27:44.24:0,44,513	0/0:16,0:16:17.24:0,17,149	0/0:19,0:19:6.83:0,7,141	0/0:19,0:19:8.53:0,9,210	0/0:27,0:27:31.05:0,31,232	1/1:18,8:26:41.58:464,42,0	0/0:32,0:32:34.57:0,35,343	0/0:13,0:13:6:0,6,56	0/0:12,0:13:13.04:0,13,177	0/1:16,0:14:14.24:200,0,14	0/1:14,0:14:5.46:174,0,5	1/1:42,0:42:28.41:439,28,0	0/0:21,0:21:22.16:0,22,267	0/0:24,0:22:5.79:0,6,179	0/0:37,0:37:36.67:0,37,414	0/1:21,0:21:1.95:2,0,217	0/0:30,0:28:26.95:0,27,584	0/0:21,0:20:17.57:0,18,114	0/1:11,0:10:1.35:4,0,1
chr10	30726813	.	T	TACACACACAC	466.73	PASS	AB=0.964;AC=8;AF=0.143;AN=56;BaseQRankSum=-4.786;DP=712;FS=1.414;HRun=0;HaplotypeScore=257.4318;InbreedingCoeff=0.1928;MQ=60.41;MQ0=15;MQRankSum=-0.639;QD=3.15;ReadPosRankSum=-5.650;VQSLOD=1.5163;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:41:33.03:0,33,644	0/0:8,0:8:6.02:0,6,113	0/0:29,0:13:8.99:0,9,185	0/0:46,0:26:1.83:0,2,208	0/0:26,0:27:9.96:0,10,615	0/0:23,0:24:26.44:0,26,488	0/0:28,0:28:39.10:0,39,566	0/1:30,0:34:99:168,0,361	0/0:20,0:20:26.94:0,27,818	0/0:29,0:28:2.97:0,3,692	0/0:18,0:18:20.98:0,21,263	0/0:17,0:19:30.08:0,30,541	0/0:19,0:19:30.09:0,30,600	0/0:26,0:26:36.03:0,36,540	0/0:28,0:28:8.28:0,8,308	0/0:33,0:33:47.46:0,47,861	1/1:5,8:16:3.01:150,3,0	1/1:9,0:15:5.69:102,6,0	0/1:19,0:17:18.12:18,0,41	0/1:16,0:16:27.88:28,0,74	0/1:46,0:45:65.01:130,0,65	0/0:21,0:21:30.96:0,31,514	0/0:23,0:22:5.13:0,5,347	0/0:38,0:38:51:0,51,852	0/0:20,0:21:30.98:0,31,546	0/0:32,0:31:64.86:0,65,1076	0/0:21,0:21:39.59:0,40,749	0/0:10,0:9:12.04:0,12,239
chr10	30726838	.	ACT	A	9114.70	PASS	AB=0.657;AC=34;AF=0.607;AN=56;BaseQRankSum=2.837;DP=792;FS=8.167;HRun=0;HaplotypeScore=144.7499;InbreedingCoeff=-0.1159;MQ=56.72;MQ0=24;MQRankSum=2.950;QD=13.75;ReadPosRankSum=4.867;VQSLOD=4.3745;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:37,4:41:99:100,0,267	1/1:1,11:12:5.60:91,6,0	0/0:50,0:15:31.32:0,31,427	0/0:55,0:21:0.22:0,0,315	1/1:7,20:27:24.56:448,25,0	1/1:5,26:31:24.11:355,24,0	1/1:2,19:21:4.46:429,4,0	0/1:39,2:39:99:545,0,286	0/1:4,21:25:58.10:512,0,58	0/1:4,25:28:25.39:656,0,25	0/1:2,22:24:10.51:245,0,11	0/1:4,18:22:22.35:386,0,22	1/1:3,19:22:8.97:320,9,0	1/1:0,25:25:36.10:524,36,0	1/1:29,1:30:29.67:358,30,0	0/1:2,30:32:1.80:669,0,2	0/0:15,0:15:19.88:0,20,176	0/0:9,0:9:0.29:0,0,81	0/1:7,0:15:41.24:95,0,41	0/1:19,2:20:25.22:138,0,25	0/1:48,0:46:0.47:0,0,97	0/1:1,20:21:25.79:333,0,26	1/1:2,23:23:7.58:331,8,0	0/1:5,33:38:19.33:618,0,19	0/1:4,18:22:22.21:389,0,22	1/1:10,34:41:10.31:883,10,0	0/1:3,30:32:16.44:508,0,16	1/1:1,11:11:11.98:181,12,0
chr10	30726840	.	T	TCA	942.79	PASS	AB=1.000;AC=8;AF=0.143;AN=56;BaseQRankSum=-5.127;DP=788;FS=4.435;HRun=0;HaplotypeScore=177.0695;InbreedingCoeff=0.6347;MQ=56.92;MQ0=21;MQRankSum=0.382;QD=6.08;ReadPosRankSum=-4.136;VQSLOD=2.5128;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:41,0:41:8.44:8,0,253	0/0:12,0:12:5.36:0,5,22	0/0:51,0:17:15.81:0,16,537	0/0:53,0:20:37.37:0,37,439	0/0:27,0:27:17.99:0,18,153	0/0:31,0:31:22.99:0,23,110	0/0:21,0:21:20.84:0,21,92	0/0:41,0:39:26.86:0,27,367	0/0:25,0:25:38.01:0,38,218	0/1:29,0:28:10.37:10,0,147	0/0:24,0:24:13.37:0,13,62	0/0:22,0:22:16.33:0,16,114	0/0:21,0:21:28.47:0,28,170	0/0:25,0:25:22.92:0,23,91	0/0:29,0:29:18.57:0,19,75	0/0:32,0:32:40.07:0,40,186	0/0:15,0:15:17.43:0,17,248	0/0:8,0:8:9.67:0,10,101	1/1:14,1:14:19.70:212,20,0	1/1:19,2:20:43.54:543,44,0	1/1:18,30:47:9.21:315,9,0	0/0:21,0:21:23.13:0,23,118	0/0:26,0:24:8.58:0,9,70	0/0:39,0:39:39.73:0,40,179	0/0:21,0:21:27.70:0,28,165	0/0:44,0:41:47.41:0,47,332	0/0:33,0:32:33.54:0,34,158	0/0:12,0:11:10.53:0,11,42
chr10	30726844	.	TCACA	T	6598	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=0.057;DP=778;FS=6.373;HRun=0;HaplotypeScore=173.1096;InbreedingCoeff=0.9402;MQ=57.74;MQ0=21;MQRankSum=3.131;QD=11.62;ReadPosRankSum=5.711;VQSLOD=3.5972;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:18,22:40:8.45:109,8,0	1/1:12,0:12:5.98:48,6,0	0/0:49,0:18:9.63:0,10,585	0/0:53,0:20:20.81:0,21,411	1/1:21,4:25:32.81:328,33,0	1/1:27,2:29:26.90:233,27,0	1/1:20,0:21:22.73:229,23,0	1/1:39,0:37:47.97:693,48,0	1/1:24,1:25:41.80:347,42,0	1/1:27,0:26:55.61:594,56,0	1/1:23,0:23:20.97:181,21,0	1/1:21,0:21:26.40:202,26,0	1/1:19,2:21:26.89:260,27,0	1/1:26,0:26:35.88:285,36,0	1/1:8,22:30:18.05:263,18,0	1/1:30,0:30:44.43:346,44,0	0/0:15,0:15:24.03:0,24,377	0/0:8,0:8:14.64:0,15,208	0/0:15,0:14:24.59:0,25,175	0/0:20,0:19:31.86:0,32,315	0/0:49,0:47:36.04:0,36,515	1/1:21,0:21:20.94:166,21,0	1/1:28,0:26:29.80:259,30,0	1/1:37,0:37:13.19:362,13,0	1/1:22,0:22:30.82:247,31,0	1/1:43,3:43:22.17:1104,22,0	1/1:33,0:32:35.42:263,35,0	1/1:12,0:11:11.50:78,12,0
chr10	30727033	.	GT	G	2197.83	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=13.716;DP=696;FS=12.503;HRun=1;HaplotypeScore=92.8110;InbreedingCoeff=0.9954;MQ=88.79;MQ0=0;MQRankSum=-3.533;QD=28.18;ReadPosRankSum=1.513;VQSLOD=2.3260;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,102,1616	0/0:5,0:5:15.05:0,15,240	0/0:37,0:37:93.37:0,93,1558	0/0:23,0:23:62.38:0,62,991	0/0:24,0:24:72.25:0,72,1151	0/0:21,0:21:63.21:0,63,1007	0/0:36,0:36:99:0,108,1703	0/0:38,0:38:99:0,111,1771	0/0:16,0:16:48.16:0,48,765	0/0:26,0:25:75.26:0,75,1193	0/0:27,0:27:81.26:0,81,1271	0/0:21,0:21:63.20:0,63,984	0/0:24,0:24:72.22:0,72,1112	0/0:27,0:27:81.25:0,81,1262	1/1:4,21:25:65.07:734,65,0	0/0:29,0:29:87.28:0,87,1367	0/0:25,0:25:75.26:0,75,1199	0/0:11,0:11:30.10:0,30,479	1/1:0,16:16:43.01:480,43,0	1/1:1,22:23:66.18:767,66,0	1/1:2,12:14:33.09:378,33,0	0/0:39,0:39:99:0,117,1842	0/0:29,0:29:87.28:0,87,1366	0/0:22,0:22:66.20:0,66,1024	0/0:23,0:23:69.22:0,69,1080	0/0:39,0:39:99:0,117,1837	0/0:26,0:26:78.25:0,78,1208	0/0:16,0:16:48.16:0,48,767
chr10	30728018	.	A	ATGTGTGTG	16086.30	PASS	AB=0.865;AC=52;AF=0.929;AN=56;BaseQRankSum=-1.954;DP=716;FS=1.836;HRun=0;HaplotypeScore=252.3968;InbreedingCoeff=0.2941;MQ=49.98;MQ0=8;MQRankSum=0.658;QD=23.45;ReadPosRankSum=1.474;VQSLOD=4.2697;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:30,3:34:14.94:303,15,0	1/1:6,4:10:15.03:523,15,0	0/0:29,0:12:2.97:0,3,20	0/1:34,0:17:9.77:27,0,10	1/1:25,10:37:23.92:532,24,0	1/1:11,3:14:5.63:165,6,0	1/1:22,5:27:24.05:540,24,0	1/1:32,0:31:36.05:620,36,0	0/1:12,7:19:2.95:415,0,3	1/1:24,4:28:48.02:1335,48,0	1/1:17,10:27:23.91:617,24,0	1/1:8,7:15:15.05:624,15,0	1/1:16,4:20:20.99:624,21,0	1/1:18,8:27:39.03:1080,39,0	1/1:29,0:29:47.98:714,48,0	1/1:12,5:17:9.03:374,9,0	1/1:11,0:27:56.94:496,57,0	1/1:13,0:28:26.71:327,27,0	1/1:18,2:21:27.04:705,27,0	1/1:20,14:39:47.97:1320,48,0	1/1:37,3:40:14.39:128,14,0	1/1:13,10:25:15.04:447,15,0	1/1:17,7:24:18.52:572,19,0	1/1:19,6:27:11.21:497,11,0	1/1:13,9:23:21.04:674,21,0	1/1:18,4:25:39.05:1167,39,0	1/1:13,5:18:15.03:523,15,0	1/1:14,4:18:21.02:737,21,0
chr10	30728039	.	T	TGTGTGC	9052.22	PASS	AB=0.992;AC=26;AF=0.464;AN=56;BaseQRankSum=-1.098;DP=701;FS=19.259;HRun=0;HaplotypeScore=276.1495;InbreedingCoeff=-0.7209;MQ=45.79;MQ0=9;MQRankSum=-7.066;QD=14.51;ReadPosRankSum=8.181;VQSLOD=1.7411;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:34,0:33:91.58:261,0,92	0/1:12,0:13:94.52:232,0,95	0/0:28,0:6:8.69:0,9,54	0/1:25,0:7:19.70:31,0,20	0/1:33,0:33:29.79:133,0,30	0/0:9,0:9:3.44:0,3,24	0/1:38,0:38:99:227,0,236	0/1:28,0:27:99:437,0,171	0/1:21,0:21:99:227,0,126	0/1:27,0:27:99:494,0,148	0/1:25,0:25:56.50:265,0,56	0/1:18,0:19:40.73:329,0,41	0/1:26,0:26:99:216,0,187	0/1:27,0:27:38.10:392,0,38	1/1:14,12:30:57.11:1362,57,0	0/1:19,0:19:72.56:285,0,73	0/1:30,0:30:99:506,0,135	0/1:25,0:25:74.41:421,0,74	0/1:18,0:18:14.45:458,0,14	0/1:36,0:36:23.64:612,0,24	0/0:40,0:40:10.77:0,11,199	0/1:24,0:24:6.87:237,0,7	0/1:24,0:24:99:244,0,110	0/1:32,0:32:98.98:99,0,119	0/1:20,0:20:66.55:327,0,67	0/1:22,0:22:99:611,0,110	0/1:16,0:16:5.43:293,0,5	0/1:11,0:12:24.76:352,0,25
chr10	30728078	.	T	TTG	27715.12	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-5.654;DP=836;FS=0.000;HRun=0;HaplotypeScore=194.0812;InbreedingCoeff=0.9729;MQ=57.94;MQ0=2;MQRankSum=-0.971;QD=35.67;ReadPosRankSum=4.090;VQSLOD=5.6206;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:12,20:31:57.82:917,58,0	1/1:3,19:22:51.17:847,51,0	0/0:34,0:30:26.15:0,26,537	0/0:25,0:19:37.90:0,38,479	1/1:6,20:27:43.07:880,43,0	1/1:4,9:13:27.56:448,28,0	1/1:6,39:45:99:1675,105,0	1/1:10,43:53:94.58:1997,95,0	1/1:8,21:28:72.17:1105,72,0	1/1:10,25:35:93.22:1470,93,0	1/1:5,15:21:10.30:678,10,0	1/1:4,29:33:84.28:1345,84,0	1/1:1,31:34:90.31:1468,90,0	1/1:8,19:27:57.18:883,57,0	1/1:6,28:34:78.27:1291,78,0	1/1:4,17:20:54.18:882,54,0	1/1:11,18:28:19.36:817,19,0	1/1:10,21:30:64.46:1042,64,0	1/1:7,19:25:57.16:901,57,0	1/1:8,32:40:78.15:1181,78,0	1/1:20,43:64:99:2072,137,0	1/1:5,9:14:30.10:497,30,0	1/1:8,12:20:42.13:651,42,0	1/1:6,27:33:59.85:910,60,0	1/1:5,24:30:69.23:1115,69,0	1/1:6,28:34:84.29:1396,84,0	1/1:5,12:17:45.14:700,45,0	1/1:1,11:12:33.11:548,33,0
chr10	30728184	.	G	GTGTGTA	36928.05	PASS	AB=1.000;AC=51;AF=0.911;AN=56;BaseQRankSum=-3.071;DP=998;FS=15.516;HRun=0;HaplotypeScore=278.3646;InbreedingCoeff=0.7295;MQ=44.59;MQ0=11;MQRankSum=-3.599;QD=40.85;ReadPosRankSum=4.342;VQSLOD=3.5541;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:22,7:30:21.25:1012,21,0	1/1:2,8:12:21.07:648,21,0	0/0:51,0:26:47.15:0,47,775	0/0:43,0:31:60.16:0,60,1018	1/1:19,13:32:51.11:1236,51,0	1/1:6,15:22:24.08:763,24,0	1/1:33,14:47:99:2361,100,0	1/1:26,31:64:99:2354,120,0	1/1:7,29:37:31.68:1535,32,0	1/1:3,36:43:99:2809,99,0	1/1:1,13:16:21.07:564,21,0	1/1:25,15:40:87.12:2174,87,0	1/1:25,14:41:99:2666,105,0	1/1:7,27:34:30.10:906,30,0	1/1:5,0:48:99:1345,99,0	1/1:8,27:38:54.19:1696,54,0	0/1:23,0:23:14.97:408,0,15	1/1:24,0:24:15.58:600,16,0	1/1:26,0:26:54:1176,54,0	1/1:37,0:38:78.18:1556,78,0	1/1:58,0:58:50.09:640,50,0	1/1:10,23:36:36.12:1071,36,0	1/1:4,31:39:60.21:1723,60,0	1/1:19,6:25:32.04:712,32,0	1/1:21,19:40:90.24:2264,90,0	1/1:12,27:42:87.22:2518,87,0	1/1:4,22:29:60.21:1895,60,0	1/1:2,10:12:4.28:296,4,0
chr10	30728196	.	A	ATGTGTG	32719.92	PASS	AB=0.988;AC=37;AF=0.661;AN=56;BaseQRankSum=7.010;DP=985;FS=14.406;HRun=0;HaplotypeScore=293.5667;InbreedingCoeff=-0.1952;MQ=46.41;MQ0=9;MQRankSum=-11.191;QD=36.93;ReadPosRankSum=6.442;VQSLOD=2.8850;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:30:14.51:741,0,15	0/1:13,0:13:18.89:546,0,19	0/0:56,0:30:21.97:0,22,1008	0/0:42,0:27:63.15:0,63,1269	0/1:31,0:31:42.83:857,0,43	0/1:22,0:22:99:577,0,105	1/1:47,0:47:33.18:1805,33,0	0/1:67,0:65:99:2235,0,134	0/1:42,0:42:99:1178,0,117	0/1:45,0:45:33.02:2047,0,33	0/1:18,0:18:39.64:465,0,40	0/1:40,0:40:81.70:1566,0,82	0/1:45,0:45:11.77:1990,0,12	0/1:35,0:35:51.83:812,0,52	1/1:47,0:46:99:2165,114,0	0/1:38,0:38:29.76:1375,0,30	1/1:18,2:20:3.19:588,3,0	1/1:17,3:20:34.33:834,34,0	1/1:3,20:24:66.18:1762,66,0	1/1:17,18:35:90.23:2131,90,0	1/1:37,11:48:70.71:1090,71,0	0/1:31,0:31:3.17:871,0,3	1/1:38,0:38:20.24:1379,20,0	0/1:25,0:25:24.03:379,0,24	1/1:38,0:38:11.89:1686,12,0	0/1:39,0:39:96.24:1884,0,96	1/1:31,0:31:25.23:1484,25,0	1/1:12,0:12:14.57:274,15,0
chr10	30728511	.	A	ATG	6412.44	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-13.445;DP=952;FS=4.188;HRun=0;HaplotypeScore=131.7970;InbreedingCoeff=0.9995;MQ=59.39;MQ0=9;MQRankSum=0.436;QD=29.41;ReadPosRankSum=1.876;VQSLOD=6.6965;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:43:56.92:0,57,648	0/0:12,0:12:36.11:0,36,443	0/0:37,0:22:41.81:0,42,472	0/0:28,0:23:40.27:0,40,508	0/0:35,0:37:84.09:0,84,1010	0/0:31,0:31:74.82:0,75,891	0/0:20,0:20:38.92:0,39,440	0/0:50,0:50:99:0,99,1196	0/0:33,0:33:75.22:0,75,910	0/0:38,0:39:99:0,102,1255	0/0:27,0:27:69.17:0,69,828	0/0:50,0:50:99:0,123,1472	0/0:42,0:42:99:0,111,1351	0/0:28,0:28:69.20:0,69,835	1/1:5,46:50:99:1762,108,0	0/0:33,0:33:78.16:0,78,928	1/1:7,28:34:54.18:880,54,0	1/1:10,12:22:26.41:649,26,0	1/1:14,17:31:51.64:795,52,0	1/1:9,34:43:66.23:1069,66,0	1/1:15,21:36:77.94:1258,78,0	0/0:27,0:27:54.15:0,54,652	0/0:43,0:43:99:0,99,1149	0/0:27,0:28:56.73:0,57,664	0/0:21,0:22:44.97:0,45,531	0/0:44,0:43:99:0,114,1366	0/0:48,0:45:99:0,120,1476	0/0:11,0:11:27.08:0,27,332
chr10	30729877	.	AC	A	1034.81	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.910;DP=734;FS=1.477;HRun=2;HaplotypeScore=66.8139;InbreedingCoeff=0.9973;MQ=78.68;MQ0=0;MQRankSum=-4.129;QD=33.38;ReadPosRankSum=1.574;VQSLOD=3.8447;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:75.24:0,75,1097	0/0:14,0:14:42.07:0,42,602	0/0:27,0:27:64.97:0,65,924	0/0:11,0:11:27.09:0,27,391	0/0:37,0:37:99:0,111,1663	0/0:26,0:26:78.24:0,78,1111	0/0:12,0:12:36.12:0,36,539	0/0:39,0:39:99:0,111,1570	0/0:23,0:23:69.20:0,69,992	0/0:33,0:33:99:0,99,1434	0/0:24,0:24:69.23:0,69,1023	0/0:27,0:27:81.17:0,81,1174	0/0:22,0:22:66.22:0,66,989	0/0:26,0:26:75.25:0,75,1124	1/1:0,31:31:87.28:1130,87,0	0/0:30,0:30:87.28:0,87,1274	0/0:21,0:21:60.18:0,60,875	0/0:34,0:34:90.28:0,90,1318	0/0:17,0:17:48.15:0,48,700	0/0:30,0:30:90.29:0,90,1324	0/0:33,0:33:99:0,99,1464	0/0:38,0:38:99:0,114,1704	0/0:29,0:29:84.27:0,84,1239	0/0:10,0:10:30.09:0,30,428	0/0:30,0:30:90.29:0,90,1318	0/0:35,0:35:99:0,99,1483	0/0:39,0:39:99:0,117,1723	0/0:9,0:9:27.09:0,27,405
chr10	30731262	.	A	AG	5815.06	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-11.560;DP=609;FS=7.798;HRun=2;HaplotypeScore=57.8660;InbreedingCoeff=0.9990;MQ=86.78;MQ0=0;MQRankSum=-1.854;QD=38.01;ReadPosRankSum=-0.641;VQSLOD=4.8766;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:96.30:0,96,1190	0/0:12,0:12:36.11:0,36,446	0/0:23,0:24:57.14:0,57,669	0/0:20,0:20:54.13:0,54,648	0/0:21,0:21:57.17:0,57,694	0/0:13,0:13:33.10:0,33,409	0/0:26,0:26:75.24:0,75,930	0/0:15,0:15:42.12:0,42,510	0/0:18,0:18:54.17:0,54,669	0/0:28,0:28:81.25:0,81,1003	0/0:13,0:13:36.11:0,36,446	0/0:26,0:26:78.25:0,78,967	0/0:26,0:26:78.25:0,78,967	0/0:19,0:19:57.18:0,57,706	1/1:0,25:25:69.23:992,69,0	0/0:18,0:18:51.16:0,51,632	1/1:0,23:23:66.22:950,66,0	1/1:1,13:14:36.12:516,36,0	1/1:1,20:21:55.07:776,55,0	1/1:0,22:22:57.19:819,57,0	1/1:5,43:48:99:1762,123,0	0/0:19,0:19:51.16:0,51,632	0/0:15,0:15:39.12:0,39,483	0/0:30,0:30:84.21:0,84,1011	0/0:27,0:27:81.25:0,81,1003	0/0:23,0:23:66.19:0,66,804	0/0:22,0:22:66.21:0,66,818	0/0:7,0:7:21.07:0,21,260
chr10	30731379	.	CGTGTGTGTGT	C	3910.98	PASS	AB=0.926;AC=31;AF=0.705;AN=44;BaseQRankSum=3.640;DP=531;FS=4.467;HRun=0;HaplotypeScore=155.3456;InbreedingCoeff=0.5007;MQ=67.38;MQ0=12;MQRankSum=-2.265;QD=13.21;ReadPosRankSum=0.302;VQSLOD=2.6521;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	1/1:16,0:16:3.01:42,3,0	1/1:20,2:24:9.03:230,9,0	./.	0/0:14,0:14:5.21:0,5,16	1/1:9,3:14:15.04:315,15,0	1/1:14,0:17:7.22:93,7,0	1/1:11,0:17:10.52:156,11,0	1/1:16,6:21:8.97:260,9,0	1/1:17,2:21:15.04:363,15,0	1/1:11,4:16:15.02:356,15,0	1/1:17,8:25:2.12:453,2,0	1/1:16,8:24:15.05:441,15,0	1/1:13,2:15:6.01:176,6,0	0/0:20,0:19:3.01:0,3,41	0/0:17,0:15:6.48:0,6,80	0/0:13,0:14:2.60:0,3,11	0/0:31,0:29:12.01:0,12,182	1/1:16,5:20:12.02:288,12,0	1/1:16,3:19:12.04:299,12,0	0/0:27,0:27:0:0,0,0	1/1:10,1:12:6:112,6,0	0/1:23,1:23:8.33:156,0,8	1/1:6,2:8:2.49:170,2,0	./.
chr10	30732693	.	G	GC	1291.06	PASS	AB=0.979;AC=12;AF=0.214;AN=56;BaseQRankSum=-6.582;DP=601;FS=20.670;HRun=9;HaplotypeScore=66.1379;InbreedingCoeff=0.3437;MQ=67.31;MQ0=0;MQRankSum=-2.413;QD=7.97;ReadPosRankSum=-4.553;VQSLOD=-0.6217;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,111,960	0/1:6,1:7:18.18:18,0,89	0/1:22,0:19:13.53:14,0,176	0/1:17,0:17:10.48:10,0,105	0/0:23,0:23:53.95:0,54,464	0/0:24,0:24:50.95:0,51,443	0/0:32,0:32:74.96:0,75,651	0/0:19,0:19:32.95:0,33,282	0/0:23,0:23:56.97:0,57,495	0/0:20,0:20:41.98:0,42,365	0/0:24,0:24:56.96:0,57,491	0/0:21,0:21:59.98:0,60,520	0/0:17,0:17:47.99:0,48,417	0/0:22,0:22:56.99:0,57,495	0/1:11,0:11:33.52:34,0,61	0/0:16,0:16:41.95:0,42,357	0/1:25,0:25:99:118,0,166	0/1:26,0:26:68.69:69,0,175	1/1:3,12:15:13.05:372,13,0	1/1:4,8:12:21.02:219,21,0	1/1:5,22:27:34.11:604,34,0	0/0:13,0:13:35.98:0,36,312	0/0:15,0:16:47.03:0,47,397	0/0:32,0:32:68.93:0,69,590	0/0:26,0:26:26.77:0,27,461	0/0:23,1:24:29.78:0,30,485	0/0:30,0:30:80.95:0,81,695	0/0:9,0:10:3.37:0,3,166
chr10	30733327	.	C	CA	903.76	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-6.643;DP=693;FS=1.477;HRun=8;HaplotypeScore=67.1057;InbreedingCoeff=0.9594;MQ=72.49;MQ0=0;MQRankSum=-3.228;QD=27.39;ReadPosRankSum=2.182;VQSLOD=4.4115;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:26:73.03:0,73,629	0/0:31,0:31:75.02:0,75,682	0/0:14,0:14:11.14:0,11,178	0/0:11,0:11:20.99:0,21,188	0/0:39,0:40:99:0,106,926	0/0:24,0:25:56.05:0,56,500	0/0:10,0:10:30.02:0,30,275	0/0:34,0:34:77.97:0,78,701	0/0:27,0:27:78.03:0,78,709	0/0:35,0:35:90.02:0,90,817	0/0:23,0:24:65:0,65,566	0/0:18,0:18:54.03:0,54,494	0/0:33,0:33:75.03:0,75,686	0/0:16,0:16:30:0,30,275	1/1:4,29:33:73.08:999,73,0	0/0:24,0:24:68.07:0,68,610	0/0:23,0:25:73.05:0,73,634	0/0:17,0:17:48.02:0,48,439	0/0:17,0:16:48.01:0,48,433	0/0:31,0:31:84.02:0,84,760	0/0:21,0:21:54.03:0,54,494	0/0:23,0:23:60.02:0,60,549	0/0:22,0:22:63.03:0,63,576	0/0:25,0:25:68.97:0,69,616	0/0:24,0:24:72.04:0,72,659	0/0:25,0:26:68.07:0,68,610	0/0:39,0:39:93.04:0,93,851	0/0:21,0:21:45.01:0,45,412
chr10	30734218	.	A	AATAC	934.38	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-4.663;DP=887;FS=0.000;HRun=0;HaplotypeScore=136.4253;InbreedingCoeff=0.9048;MQ=60.37;MQ0=5;MQRankSum=2.632;QD=21.73;ReadPosRankSum=1.302;VQSLOD=2.9015;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:43:63.15:0,63,1358	0/0:12,0:12:24.05:0,24,366	0/0:31,0:14:17.87:0,18,181	0/0:26,0:15:6.55:0,7,97	0/0:20,0:20:45.13:0,45,667	0/0:41,0:41:99:0,99,1559	0/0:23,0:23:45.15:0,45,718	0/0:44,0:44:57.15:0,57,786	0/0:27,0:27:57.17:0,57,885	0/0:39,0:39:93.29:0,93,1448	0/0:23,0:22:57.18:0,57,916	0/0:39,0:39:87.29:0,87,1401	0/0:42,0:42:87.27:0,87,1385	0/0:32,0:32:81.25:0,81,1289	1/1:11,31:43:42.14:1029,42,0	0/0:39,0:39:84.28:0,84,1358	0/0:25,0:25:56.88:0,57,865	0/0:21,0:21:45.14:0,45,714	0/0:34,0:32:59.86:0,60,891	0/0:36,0:36:81.28:0,81,1320	0/0:47,0:47:99:0,117,1847	0/0:30,0:31:75.25:0,75,1213	0/0:35,0:35:87.24:0,87,1347	0/0:21,0:21:48.16:0,48,787	0/0:25,0:25:69.21:0,69,1110	0/0:29,0:29:78.26:0,78,1265	0/0:36,0:37:90.78:0,91,1461	0/0:22,0:22:54.17:0,54,867
chr10	30735947	.	G	GCA	24157.13	PASS	AB=0.563;AC=44;AF=0.786;AN=56;BaseQRankSum=-11.276;DP=1118;FS=2.941;HRun=0;HaplotypeScore=193.8762;InbreedingCoeff=0.3373;MQ=58.31;MQ0=20;MQRankSum=0.383;QD=25.95;ReadPosRankSum=0.331;VQSLOD=5.6254;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:18,41:59:64.60:2062,65,0	0/1:1,10:11:18.96:226,0,19	0/0:65,0:28:19.09:0,19,152	0/0:61,0:34:16.54:0,17,248	1/1:3,22:24:54.18:872,54,0	0/1:6,21:26:19.69:729,0,20	0/1:18,41:60:39.96:1454,0,40	1/1:21,20:43:32.31:1013,32,0	1/1:13,39:54:3.45:1562,3,0	1/1:13,30:45:22.69:1339,23,0	0/1:6,17:23:22.70:683,0,23	1/1:5,41:45:49.54:1830,50,0	1/1:7,36:43:39.26:1319,39,0	1/1:10,40:50:99:1615,99,0	0/0:8,0:59:99:0,124,606	1/1:6,32:39:25.47:1443,25,0	1/1:12,0:17:15:133,15,0	1/1:9,0:14:19.72:141,20,0	1/1:18,0:20:27.74:190,28,0	1/1:3,1:28:19.64:130,20,0	1/1:68,0:89:37.47:333,37,0	1/1:5,22:27:57.19:913,57,0	0/1:7,19:26:7.71:774,0,8	1/1:12,53:65:64.61:2080,65,0	1/1:4,25:31:15.20:928,15,0	0/1:8,34:43:36.37:1456,0,36	1/1:6,18:25:11.69:698,12,0	1/1:6,5:11:15.05:233,15,0
chr10	30736138	.	C	CA	5098.57	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-2.363;DP=996;FS=20.169;HRun=6;HaplotypeScore=141.5681;InbreedingCoeff=0.9959;MQ=62.36;MQ0=16;MQRankSum=1.938;QD=23.39;ReadPosRankSum=0.305;VQSLOD=3.0424;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,135,1357	0/0:6,0:6:15.03:0,15,153	0/0:61,0:20:24.85:0,25,332	0/0:70,0:30:65.11:0,65,588	0/0:21,0:21:54.11:0,54,544	0/0:28,0:28:58.93:0,59,586	0/0:42,0:43:99:0,104,1171	0/0:27,0:26:69.62:0,70,703	0/0:35,0:35:93.21:0,93,948	0/0:36,0:36:88.75:0,89,890	0/0:28,0:28:75.17:0,75,765	0/0:31,0:31:84.18:0,84,857	0/0:26,0:26:69.15:0,69,703	0/0:33,0:33:90.20:0,90,918	0/0:43,0:43:99:0,117,1193	0/0:32,0:32:84.18:0,84,857	1/1:3,30:32:69.20:853,69,0	1/1:1,22:22:54.17:678,54,0	1/1:8,20:25:57.12:672,57,0	1/1:8,18:26:45.14:560,45,0	1/1:16,83:104:99:2335,199,0	0/0:26,0:26:69.14:0,69,698	0/0:26,0:26:69.15:0,69,704	0/0:69,0:65:99:0,144,1467	0/0:29,0:27:75.17:0,75,765	0/0:24,0:24:69.15:0,69,703	0/0:18,0:18:48.09:0,48,482	0/0:14,0:15:36.08:0,36,367
chr10	30736208	.	G	GCACACACACACACACA	17160.95	PASS	AB=0.755;AC=46;AF=0.821;AN=56;BaseQRankSum=-4.271;DP=649;FS=2.713;HRun=0;HaplotypeScore=290.1097;InbreedingCoeff=0.6697;MQ=46.82;MQ0=5;MQRankSum=-2.829;QD=32.32;ReadPosRankSum=-1.185;VQSLOD=3.7233;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:32,0:33:21.05:563,21,0	1/1:4,0:3:9.03:407,9,0	0/0:30,0:20:21.03:0,21,434	0/0:30,0:24:27:0,27,544	1/1:22,1:24:22.11:690,22,0	1/1:27,1:30:27.56:1170,28,0	0/0:19,2:31:0.48:0,0,2	1/1:22,0:19:27.09:815,27,0	1/1:21,0:28:47.96:1334,48,0	1/1:29,0:30:51.16:1305,51,0	1/1:17,0:18:5.97:166,6,0	0/1:18,1:20:4.02:817,0,4	1/1:16,1:17:27.06:761,27,0	1/1:23,3:26:32.10:1408,32,0	0/0:7,0:27:47.47:0,47,1259	1/1:6,4:19:15.05:1082,15,0	1/1:27,0:28:30.06:1093,30,0	1/1:17,2:18:27.02:1174,27,0	1/1:9,0:9:18.02:399,18,0	1/1:15,0:16:3.01:89,3,0	1/1:41,0:39:22.37:381,22,0	0/1:6,3:18:0:1,0,0	1/1:19,2:21:24.04:700,24,0	1/1:31,0:29:8.82:370,9,0	1/1:19,1:18:9.03:204,9,0	1/1:23,2:25:44.26:1687,44,0	1/1:13,0:13:21.07:507,21,0	1/1:13,0:13:3.01:40,3,0
chr10	30736303	.	TA	T	10167.56	PASS	AB=1.000;AC=53;AF=0.946;AN=56;BaseQRankSum=-2.749;DP=440;FS=2.454;HRun=7;HaplotypeScore=50.0656;InbreedingCoeff=0.6424;MQ=74.97;MQ0=6;MQRankSum=-5.821;QD=23.92;ReadPosRankSum=2.743;VQSLOD=5.2058;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,19:20:45.10:459,45,0	1/1:1,9:10:24.05:245,24,0	0/0:15,0:15:21.05:0,21,240	0/1:15,0:13:13.37:13,0,156	1/1:2,20:22:60.14:612,60,0	1/1:0,24:24:69.16:704,69,0	1/1:2,9:11:18.04:183,18,0	1/1:5,26:26:72.14:726,72,0	1/1:2,14:16:39.08:398,39,0	1/1:0,14:14:42.10:428,42,0	1/1:1,22:22:60.14:612,60,0	1/1:4,5:9:15.03:153,15,0	1/1:3,8:11:24.05:244,24,0	1/1:1,8:9:24.05:245,24,0	1/1:3,12:15:39.09:397,39,0	1/1:0,15:15:42.09:428,42,0	1/1:5,14:19:51.09:506,51,0	1/1:2,11:12:30.06:305,30,0	1/1:6,8:13:21.05:214,21,0	1/1:3,13:16:42.07:420,42,0	1/1:2,8:10:21.05:214,21,0	1/1:0,8:8:21.05:214,21,0	1/1:5,7:12:21.04:214,21,0	1/1:0,10:10:30.07:306,30,0	1/1:1,25:25:69.16:704,69,0	1/1:2,14:16:42.09:429,42,0	1/1:3,19:22:48.11:489,48,0	1/1:0,13:13:30.07:306,30,0
chr10	30737094	.	C	CT	14446.57	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=13.565;DP=671;FS=18.907;HRun=1;HaplotypeScore=281.5118;InbreedingCoeff=0.9955;MQ=70.07;MQ0=0;MQRankSum=-14.496;QD=24.49;ReadPosRankSum=3.581;VQSLOD=0.8535;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,18:22:59.75:529,60,0	1/1:4,9:13:29.92:271,30,0	0/0:17,0:17:51.11:0,51,639	0/0:27,0:27:75.24:0,75,951	1/1:2,23:25:68.72:592,69,0	1/1:1,21:22:66.01:622,66,0	1/1:4,12:16:44.92:391,45,0	1/1:7,26:33:95.75:915,96,0	1/1:4,23:27:77.81:690,78,0	1/1:5,22:27:69.70:688,70,0	1/1:4,20:24:66.04:609,66,0	1/1:2,27:29:78.05:677,78,0	1/1:6,24:30:76.15:735,76,0	1/1:4,26:30:86.68:767,87,0	0/0:37,0:37:99:0,111,1440	1/1:4,22:26:75.01:698,75,0	1/1:2,6:8:17.71:160,18,0	1/1:3,9:12:28.83:260,29,0	1/1:8,16:24:71.99:673,72,0	1/1:3,39:42:99:1066,107,0	1/1:4,15:19:42.22:340,42,0	1/1:4,18:22:56.90:512,57,0	1/1:3,24:27:74.70:642,75,0	1/1:3,16:19:23.62:193,24,0	1/1:3,27:30:83.75:739,84,0	1/1:7,21:28:74.66:725,75,0	1/1:4,21:25:71.91:652,72,0	1/1:0,10:10:30.06:302,30,0
chr10	30737095	.	T	TTCC	34725.22	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=9.782;DP=667;FS=12.696;HRun=0;HaplotypeScore=233.3097;InbreedingCoeff=0.9961;MQ=71.13;MQ0=0;MQRankSum=-13.994;QD=59.36;ReadPosRankSum=2.603;VQSLOD=3.1359;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:22:60.19:1288,60,0	1/1:11,0:11:30.03:627,30,0	0/0:19,0:19:51.12:0,51,910	0/0:26,0:26:75.24:0,75,1342	1/1:26,0:26:69.18:1415,69,0	1/1:23,0:23:66.19:1449,66,0	1/1:16,0:16:42.13:903,42,0	1/1:34,0:34:96.25:2008,96,0	1/1:26,0:26:78.26:1656,78,0	1/1:27,0:27:75.21:1579,75,0	1/1:25,0:25:69.18:1474,69,0	1/1:28,0:28:81.28:1757,81,0	1/1:30,0:30:90.20:1813,90,0	1/1:30,0:30:90.23:1920,90,0	0/0:37,0:37:99:0,111,2030	1/1:25,0:25:75.25:1665,75,0	1/1:8,0:8:17.79:341,18,0	1/1:11,0:11:30.09:613,30,0	1/1:25,0:25:72.20:1518,72,0	1/1:42,0:42:99:2675,126,0	1/1:17,0:17:42.04:840,42,0	1/1:18,4:22:57.20:1284,57,0	1/1:27,1:28:78.22:1672,78,0	1/1:18,0:18:27.54:545,28,0	1/1:30,0:30:87.19:1826,87,0	1/1:26,0:26:78.25:1629,78,0	1/1:25,0:25:72.20:1539,72,0	1/1:10,0:10:30.10:690,30,0
chr10	30737096	.	C	CCA	21636.06	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=11.425;DP=711;FS=3.540;HRun=0;HaplotypeScore=294.5610;InbreedingCoeff=0.9831;MQ=69.53;MQ0=0;MQRankSum=-13.356;QD=34.40;ReadPosRankSum=5.140;VQSLOD=4.4803;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,18:27:47.48:840,47,0	1/1:4,9:13:36.09:464,36,0	0/0:19,0:19:54.16:0,54,786	0/0:26,0:26:75.25:0,75,1115	1/1:4,23:29:64.79:800,65,0	1/1:3,21:24:53.67:916,54,0	1/1:9,12:21:35.43:652,35,0	1/1:11,26:37:80.36:1312,80,0	1/1:3,23:26:59:949,59,0	1/1:8,22:30:39.77:1049,40,0	1/1:6,20:26:51.85:856,52,0	1/1:3,26:30:80.36:1046,80,0	1/1:7,24:32:72.75:1135,73,0	1/1:6,25:32:74.73:1170,75,0	0/0:37,0:37:99:0,111,1697	1/1:3,22:25:74.46:1005,74,0	1/1:3,6:9:16.73:187,17,0	1/1:2,9:11:11.37:366,11,0	1/1:9,16:25:49.78:921,50,0	1/1:4,39:43:99:1612,108,0	1/1:4,15:19:45.12:555,45,0	1/1:5,18:23:63.20:829,63,0	1/1:7,24:31:84.22:1035,84,0	1/1:4,16:20:29.95:356,30,0	1/1:4,27:31:68.45:1067,68,0	1/1:8,21:29:87.03:1145,87,0	1/1:5,20:26:68.89:935,69,0	1/1:0,10:10:30.10:432,30,0
chr10	30737483	.	T	TA	3660.33	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-1.853;DP=499;FS=3.339;HRun=4;HaplotypeScore=83.1029;InbreedingCoeff=0.9394;MQ=67.96;MQ0=1;MQRankSum=0.171;QD=38.94;ReadPosRankSum=1.356;VQSLOD=2.8548;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:57.12:0,57,702	0/0:7,0:7:21.07:0,21,271	0/0:10,0:7:0.78:0,1,127	0/0:11,0:7:17.94:0,18,185	0/0:29,0:29:84.19:0,84,1033	0/0:17,0:17:51.06:0,51,598	0/0:14,0:14:42.12:0,42,518	0/0:23,0:23:63.18:0,63,781	0/0:18,0:18:54.16:0,54,685	0/0:20,0:20:60.17:0,60,751	0/0:24,0:24:72.18:0,72,907	0/0:21,0:21:63.20:0,63,804	0/0:21,0:21:57.11:0,57,692	0/0:17,0:17:51.08:0,51,626	0/0:22,0:22:58.90:0,59,372	0/0:11,0:11:33.11:0,33,426	1/1:0,25:25:63.21:942,63,0	1/1:2,11:13:33.11:489,33,0	1/1:0,13:13:39.10:543,39,0	1/1:0,33:33:90.30:1328,90,0	1/1:0,10:10:24.08:359,24,0	0/0:10,0:10:30.10:0,30,386	0/0:26,0:26:78.16:0,78,952	0/0:9,0:9:27.07:0,27,335	0/0:25,0:25:75.15:0,75,931	0/0:20,0:20:60.14:0,60,758	0/0:24,0:23:72.23:0,72,921	0/0:5,0:5:15.01:0,15,175
chr10	30737484	.	AT	A	486.76	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=0.229;DP=502;FS=4.486;HRun=7;HaplotypeScore=95.9611;InbreedingCoeff=0.8963;MQ=68.78;MQ0=1;MQRankSum=1.402;QD=22.13;ReadPosRankSum=1.338;VQSLOD=3.2522;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:54.17:0,54,679	0/0:7,0:7:21.07:0,21,260	0/0:12,0:9:8.35:0,8,100	0/0:11,0:7:18:0,18,184	0/0:28,0:28:78.24:0,78,969	0/0:17,0:17:45.13:0,45,553	0/0:15,0:15:39.09:0,39,463	0/0:21,0:21:57.18:0,57,717	0/0:19,0:19:57.16:0,57,702	0/0:20,0:20:54.17:0,54,670	0/0:24,0:24:69.13:0,69,839	0/0:21,0:21:60.19:0,60,748	0/0:21,0:21:54.16:0,54,664	0/0:19,0:19:48.15:0,48,592	1/1:1,21:22:57.13:582,57,0	0/0:11,0:11:33.11:0,33,415	0/0:26,0:26:63.92:0,64,355	0/0:13,0:13:31.97:0,32,178	0/0:12,0:12:31.93:0,32,176	0/0:33,0:33:87.14:0,87,483	0/0:10,0:10:23.22:0,23,127	0/0:10,0:10:30:0,30,343	0/0:27,0:27:72.14:0,72,872	0/0:9,0:9:24.08:0,24,302	0/0:25,0:25:69.22:0,69,864	0/0:20,0:20:57.18:0,57,717	0/0:24,0:23:72.23:0,72,904	0/0:5,0:5:12.04:0,12,151
chr10	30737596	.	CAGAGAGAAAGAGAGAGAGAG	C	3960.47	PASS	AB=1.000;AC=39;AF=0.696;AN=56;BaseQRankSum=-1.692;DP=385;FS=14.115;HRun=0;HaplotypeScore=230.6476;InbreedingCoeff=-0.0078;MQ=67.11;MQ0=8;MQRankSum=0.165;QD=11.89;ReadPosRankSum=1.136;VQSLOD=1.0889;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:20:13.18:225,13,0	1/1:10,0:10:17.98:150,18,0	0/0:12,0:7:4.31:0,4,82	0/0:28,0:14:18.37:0,18,178	0/1:23,0:23:93.82:94,0,214	0/1:8,0:8:38.51:65,0,39	0/1:10,0:10:20.24:64,0,20	1/1:17,0:17:35.81:291,36,0	0/1:8,0:8:74.80:75,0,93	0/1:17,0:17:99:176,0,106	0/1:12,0:12:37.97:38,0,97	1/1:2,7:9:2.94:18,3,0	0/1:12,0:12:15.38:266,0,15	0/1:17,0:17:36.69:224,0,37	0/0:12,0:11:27.04:0,27,517	1/1:9,0:8:11.82:100,12,0	1/1:19,0:19:26.49:203,26,0	1/1:10,0:10:4.81:126,5,0	1/1:16,0:16:47.89:407,48,0	1/1:10,0:10:20.97:174,21,0	1/1:15,0:15:38.88:314,39,0	1/1:12,0:12:11.66:99,12,0	1/1:10,0:10:14.66:110,15,0	1/1:10,0:10:17.81:150,18,0	1/1:12,0:12:6.93:158,7,0	0/1:18,0:18:11.79:264,0,12	0/1:16,0:15:18.69:108,0,19	0/1:11,0:11:28.13:64,0,28
chr10	30737602	.	GAA	G	5032.55	PASS	AB=1.000;AC=49;AF=0.875;AN=56;BaseQRankSum=-1.612;DP=344;FS=4.126;HRun=3;HaplotypeScore=92.0611;InbreedingCoeff=0.7333;MQ=66.49;MQ0=13;MQRankSum=0.699;QD=17.23;ReadPosRankSum=2.841;VQSLOD=2.3842;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:18:13.23:225,13,0	1/1:7,0:7:17.98:150,18,0	0/0:12,0:7:4.33:0,4,82	0/0:27,0:13:16.96:0,17,175	1/1:14,4:18:35.79:297,36,0	1/1:7,0:7:20.97:174,21,0	1/1:7,0:7:14.93:119,15,0	1/1:13,0:12:35.87:295,36,0	1/1:8,0:8:17.94:143,18,0	1/1:11,3:14:38.81:305,39,0	1/1:6,4:10:11.99:100,12,0	0/1:9,0:9:0.19:13,0,0	1/1:11,0:11:29.90:234,30,0	1/1:16,0:16:38.81:320,39,0	0/0:12,0:12:6.64:0,7,199	1/1:8,0:7:14.75:125,15,0	1/1:17,0:17:26.66:203,27,0	1/1:8,0:8:4.81:126,5,0	1/1:16,0:16:47.89:407,48,0	1/1:9,0:9:20.97:174,21,0	1/1:15,0:15:41.88:339,42,0	1/1:9,3:11:11.70:100,12,0	1/1:9,0:8:14.66:110,15,0	1/1:10,0:10:17.85:150,18,0	1/1:9,0:9:23.97:200,24,0	1/1:10,5:15:44.95:389,45,0	1/1:13,0:11:26.79:196,27,0	1/1:10,0:10:17.93:141,18,0
chr10	30737895	.	TA	T	20354.90	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=5.723;DP=707;FS=4.849;HRun=1;HaplotypeScore=225.2481;InbreedingCoeff=0.9997;MQ=85.68;MQ0=0;MQRankSum=-7.265;QD=38.85;ReadPosRankSum=3.801;VQSLOD=4.0660;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,39:39:99:1468,105,0	1/1:0,13:13:30.10:419,30,0	0/0:28,0:28:76.89:0,77,1280	0/0:23,0:23:69.21:0,69,1068	1/1:0,27:27:66.21:920,66,0	1/1:0,25:25:75.25:1048,75,0	1/1:0,14:14:33.11:461,33,0	1/1:0,22:22:66.22:922,66,0	1/1:0,28:28:84.28:1174,84,0	1/1:0,43:43:99:1787,129,0	1/1:0,23:23:60.20:839,60,0	1/1:0,29:29:78.26:1089,78,0	1/1:0,31:31:90.30:1258,90,0	1/1:0,24:24:60.20:838,60,0	1/1:0,31:31:93.31:1299,93,0	1/1:0,31:31:84.28:1174,84,0	0/0:18,0:18:51.16:0,51,781	0/0:21,0:21:63.21:0,63,1007	0/0:17,0:17:51.13:0,51,747	0/0:27,0:27:63.20:0,63,982	0/0:49,0:49:99:0,135,2130	1/1:0,16:16:42.14:587,42,0	1/1:0,21:21:57.19:794,57,0	1/1:0,26:26:66.22:923,66,0	1/1:0,19:19:57.19:797,57,0	1/1:0,25:25:75.25:1048,75,0	1/1:0,28:28:81.27:1132,81,0	1/1:0,9:9:27.09:377,27,0
chr10	30738055	.	G	GT	22450.95	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=4.685;DP=742;FS=13.686;HRun=2;HaplotypeScore=122.1592;InbreedingCoeff=0.9999;MQ=81.99;MQ0=0;MQRankSum=-4.332;QD=37.48;ReadPosRankSum=3.798;VQSLOD=3.0947;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,31:33:84.28:1197,84,0	1/1:0,15:16:42.14:602,42,0	0/0:20,0:20:54.06:0,54,633	0/0:20,0:20:60.09:0,60,694	1/1:3,35:38:99:1445,102,0	1/1:0,35:35:99:1468,102,0	1/1:1,14:15:30.10:432,30,0	1/1:2,29:31:90.27:1241,90,0	1/1:1,26:27:78.26:1123,78,0	1/1:5,30:35:90.28:1259,90,0	1/1:0,22:22:57.19:821,57,0	1/1:1,29:30:75.25:1080,75,0	1/1:3,31:34:87.29:1252,87,0	1/1:1,28:29:72.24:1035,72,0	1/1:2,25:27:66.22:950,66,0	1/1:1,28:29:81.27:1166,81,0	0/0:19,0:19:57.17:0,57,695	0/0:20,0:20:57.18:0,57,706	0/0:16,0:16:42.13:0,42,520	0/0:30,0:30:81.25:0,81,1002	0/0:18,0:18:54.15:0,54,656	1/1:0,31:31:84.24:1177,84,0	1/1:0,32:32:78.26:1123,78,0	1/1:1,19:20:45.15:648,45,0	1/1:1,29:30:78.26:1123,78,0	1/1:1,33:34:99:1367,99,0	1/1:1,31:32:87.29:1252,87,0	1/1:1,17:18:48.16:691,48,0
chr10	30739190	.	T	TGC	4651.66	PASS	AB=1.000;AC=39;AF=0.696;AN=56;BaseQRankSum=-8.153;DP=570;FS=11.142;HRun=0;HaplotypeScore=143.8554;InbreedingCoeff=0.7862;MQ=64.35;MQ0=8;MQRankSum=5.701;QD=11.00;ReadPosRankSum=3.394;VQSLOD=4.1787;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:25,3:28:21.07:312,21,0	1/1:9,1:10:9.02:124,9,0	0/0:18,0:10:24.01:0,24,245	0/0:31,0:20:31.18:0,31,343	1/1:24,2:26:6.02:92,6,0	1/1:17,1:18:9.03:114,9,0	1/1:23,2:24:12.04:194,12,0	1/1:26,0:26:54.73:418,55,0	1/1:17,1:18:12.04:167,12,0	1/1:27,2:29:66.80:599,67,0	1/1:12,0:12:6.01:76,6,0	1/1:25,1:26:66.93:699,67,0	1/1:16,0:16:6.02:78,6,0	0/1:15,0:15:0.36:136,0,0	0/0:17,0:22:41.23:0,41,269	1/1:16,0:16:15.05:191,15,0	0/0:15,0:15:5.81:0,6,33	0/0:6,0:8:22.74:0,23,125	0/0:20,0:20:43.50:0,44,310	0/0:11,0:15:14.61:0,15,92	0/0:18,0:18:13.16:0,13,75	1/1:20,3:23:8.39:125,8,0	1/1:23,1:24:11.89:166,12,0	1/1:37,3:40:23.84:384,24,0	1/1:28,0:28:1.35:43,1,0	1/1:21,1:22:48.22:453,48,0	1/1:16,0:16:17.28:206,17,0	1/1:5,0:5:6.49:74,6,0
chr10	30739191	.	GCGCA	G	855.12	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=8.413;DP=561;FS=10.704;HRun=0;HaplotypeScore=161.7854;InbreedingCoeff=0.7580;MQ=63.68;MQ0=8;MQRankSum=-9.092;QD=9.00;ReadPosRankSum=-2.832;VQSLOD=1.7312;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:29.96:0,30,411	0/0:10,0:10:11.99:0,12,184	0/0:17,0:9:17.11:0,17,165	0/0:30,0:19:35.42:0,35,307	0/0:25,0:25:13.56:0,14,146	0/0:19,0:19:12.02:0,12,180	0/0:24,0:23:14.97:0,15,239	0/0:25,0:25:64.19:0,64,563	0/0:18,0:18:15.01:0,15,200	0/0:29,0:29:74.48:0,74,918	0/0:12,0:12:8.04:0,8,110	0/0:26,0:26:68.32:0,68,816	0/0:15,0:15:8.06:0,8,111	0/0:16,0:16:17.91:0,18,287	1/1:17,5:22:43.17:315,43,0	0/0:15,0:15:18.03:0,18,259	1/1:15,0:15:5.95:58,6,0	1/1:7,0:8:23.90:264,24,0	0/1:19,0:19:71.91:214,0,72	1/1:15,0:15:17.02:96,17,0	1/1:16,0:16:12.46:76,12,0	0/0:22,0:22:13.69:0,14,170	0/0:24,0:24:11.49:0,11,189	0/0:40,0:40:30.10:0,30,526	0/0:28,0:28:11.89:0,12,82	0/0:21,0:21:56.68:0,57,694	0/0:17,0:17:25.44:0,25,333	0/0:5,0:5:5:0,5,78
chr10	30739192	.	C	CACAA	882.57	PASS	AB=0.853;AC=13;AF=0.232;AN=56;BaseQRankSum=8.034;DP=564;FS=25.628;HRun=0;HaplotypeScore=167.5741;InbreedingCoeff=0.6108;MQ=62.68;MQ0=10;MQRankSum=-10.097;QD=7.12;ReadPosRankSum=-3.787;VQSLOD=0.6913;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:10.07:0,10,136	0/0:10,0:10:9.57:0,10,46	0/0:16,0:8:23.97:0,24,432	0/0:30,0:19:50.87:0,51,756	0/0:26,0:25:7.99:0,8,46	0/0:18,0:18:10.42:0,10,53	0/0:24,0:23:15.24:0,15,100	0/0:25,0:25:65.69:0,66,916	0/0:18,0:18:12.43:0,12,62	0/0:28,0:28:35.15:0,35,681	0/0:12,0:12:5.38:0,5,25	0/0:27,0:27:50.18:0,50,674	0/0:16,0:16:4.05:0,4,13	0/0:16,0:16:14.78:0,15,110	1/1:20,0:20:23.71:290,24,0	0/0:15,0:15:16.63:0,17,89	0/1:3,11:14:4.49:38,0,4	1/1:8,0:8:13.77:145,14,0	1/1:20,0:20:20.71:323,21,0	1/1:16,0:16:16.34:134,16,0	1/1:15,0:15:16.53:102,17,0	0/0:24,0:24:5.99:0,6,66	0/1:25,0:25:4.13:4,0,23	0/0:40,0:40:25.88:0,26,162	0/0:28,0:28:9.84:0,10,60	0/0:21,0:21:3.74:0,4,530	0/0:17,0:17:16.16:0,16,119	0/1:5,0:5:20.24:20,0,27
chr10	30739193	.	G	GCGCA	7407.04	PASS	AB=0.528;AC=37;AF=0.661;AN=56;BaseQRankSum=-10.219;DP=587;FS=13.507;HRun=0;HaplotypeScore=151.1750;InbreedingCoeff=0.6521;MQ=61.68;MQ0=11;MQRankSum=5.635;QD=16.68;ReadPosRankSum=5.313;VQSLOD=3.6948;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,20:31:20.97:393,21,0	1/1:1,8:9:9.01:197,9,0	0/0:16,0:8:24.01:0,24,245	0/0:29,0:18:31.18:0,31,343	1/1:4,18:26:6.02:104,6,0	1/1:1,15:18:9.03:250,9,0	1/1:7,17:24:11.74:140,12,0	1/1:27,0:26:60.38:508,60,0	1/1:2,16:18:12:270,12,0	1/1:3,26:30:77.41:1095,77,0	1/1:1,10:15:6.01:167,6,0	1/1:20,7:27:62.22:1002,62,0	0/1:2,13:18:14.67:157,0,15	0/1:2,13:16:10.13:315,0,10	0/0:20,0:20:42.40:0,42,298	1/1:2,12:15:15.05:417,15,0	0/0:14,0:14:8.71:0,9,59	0/0:8,0:8:23.45:0,23,152	0/0:21,0:21:39.08:0,39,260	0/0:17,0:16:16.38:0,16,97	0/0:18,0:18:12.65:0,13,75	1/1:6,18:30:8.71:178,9,0	0/1:2,23:26:9.54:254,0,10	1/1:5,34:42:23.25:555,23,0	1/1:0,23:26:0.62:79,1,0	1/1:3,18:22:55.95:779,56,0	1/1:3,11:17:17.29:355,17,0	1/1:1,4:5:9.03:192,9,0
chr10	30739220	.	CACACACACAT	C	1209.14	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=5.061;DP=622;FS=3.919;HRun=0;HaplotypeScore=203.6360;InbreedingCoeff=0.5876;MQ=56.24;MQ0=17;MQRankSum=-6.629;QD=9.60;ReadPosRankSum=-5.343;VQSLOD=1.2937;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:27:33.73:0,34,1367	0/0:8,0:8:18.01:0,18,365	0/0:24,0:10:20.12:0,20,289	0/0:38,0:17:36.43:0,36,429	0/0:23,0:21:19.09:0,19,353	0/0:20,0:20:33.02:0,33,875	0/0:24,0:23:37.43:0,37,778	0/0:28,0:25:63.51:0,64,823	0/0:19,0:19:29.96:0,30,728	0/0:32,0:32:80.99:0,81,2312	0/0:15,0:14:23.04:0,23,507	0/0:27,0:27:66.47:0,66,2041	0/0:17,0:17:29.86:0,30,769	0/0:20,0:20:32.93:0,33,907	1/1:23,5:28:52.42:493,52,0	0/0:13,0:13:24.05:0,24,801	1/1:18,0:18:32.71:239,33,0	1/1:10,2:11:22.21:308,22,0	0/1:24,0:23:99:139,0,538	0/1:22,0:20:51.45:110,0,51	0/1:22,0:22:77.39:77,0,112	0/0:29,0:28:35.02:0,35,951	0/0:24,0:23:23.79:0,24,856	0/0:42,0:42:48.50:0,48,1342	0/0:18,0:18:11.78:0,12,168	0/0:22,0:22:62.95:0,63,1649	0/0:18,0:18:32.07:0,32,924	0/0:7,0:7:15.01:0,15,469
chr10	30740427	.	AACACAC	A	5394.20	PASS	AB=0.779;AC=48;AF=0.857;AN=56;BaseQRankSum=6.276;DP=496;FS=0.000;HRun=0;HaplotypeScore=174.2685;InbreedingCoeff=0.4752;MQ=69.00;MQ0=10;MQRankSum=-5.853;QD=12.72;ReadPosRankSum=3.653;VQSLOD=4.0507;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:15:18.06:245,18,0	1/1:11,0:11:12.04:169,12,0	0/0:28,0:18:27.09:0,27,605	0/0:30,0:23:27.01:0,27,514	1/1:20,0:21:14.73:202,15,0	1/1:30,0:29:21.07:298,21,0	1/1:21,0:21:9.03:131,9,0	1/1:9,0:15:9.03:129,9,0	1/1:19,0:19:36.10:490,36,0	1/1:13,0:13:25.32:338,25,0	1/1:14,0:14:6.02:84,6,0	1/1:11,0:11:15.05:210,15,0	1/1:16,0:16:24.08:321,24,0	1/1:7,0:9:12.04:168,12,0	1/1:3,0:25:30.10:419,30,0	1/1:12,0:12:15.05:210,15,0	0/1:23,0:23:31.95:60,0,32	1/1:16,0:16:5.76:47,6,0	1/1:25,0:25:39.03:633,39,0	0/1:4,15:19:8.09:77,0,8	0/0:3,11:13:0.89:0,1,2	1/1:13,0:13:12.02:150,12,0	1/1:21,0:19:12.30:172,12,0	1/1:16,0:16:6.49:85,6,0	1/1:10,0:9:3.01:42,3,0	1/1:18,0:18:27.09:346,27,0	1/1:23,0:23:18.06:243,18,0	1/1:7,0:7:9.03:126,9,0
chr10	30740431	.	CACACACACACACACACAGAG	C	16610.29	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=5.118;DP=477;FS=4.959;HRun=0;HaplotypeScore=214.3513;InbreedingCoeff=0.8654;MQ=64.69;MQ0=10;MQRankSum=-6.611;QD=54.46;ReadPosRankSum=6.394;VQSLOD=3.4853;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:1,14:15:21.07:1052,21,0	1/1:3,0:12:12.51:608,13,0	0/0:25,0:15:41.51:0,42,2273	0/0:28,0:21:57.02:0,57,2549	1/1:3,0:23:20.56:788,21,0	1/1:2,21:24:21.07:1163,21,0	1/1:3,0:20:9.03:445,9,0	1/1:12,0:11:21.01:533,21,0	1/1:0,0:18:36.12:1797,36,0	1/1:3,0:14:27.09:1217,27,0	1/1:2,0:14:6.02:305,6,0	1/1:0,10:11:15.05:837,15,0	1/1:1,14:16:24.08:1331,24,0	1/1:4,3:8:12.04:665,12,0	0/0:24,0:24:33.08:0,33,474	1/1:4,9:13:15.05:857,15,0	0/0:23,0:23:30.09:0,30,1048	0/0:17,0:17:15.05:0,15,562	0/0:23,0:23:63.21:0,63,1652	0/0:18,0:18:9.03:0,9,423	0/0:14,0:13:6.02:0,6,313	1/1:1,11:12:15.05:720,15,0	1/1:6,15:20:12.80:683,13,0	1/1:1,13:16:6.49:284,6,0	1/1:4,4:7:3.01:171,3,0	1/1:0,18:18:44.66:1621,45,0	1/1:4,16:20:18.06:1019,18,0	1/1:1,7:8:9.03:514,9,0
chr10	30740441	.	CACACACAGAG	C	8217.74	PASS	AB=1.000;AC=46;AF=0.821;AN=56;BaseQRankSum=6.439;DP=427;FS=5.237;HRun=0;HaplotypeScore=169.8027;InbreedingCoeff=0.6304;MQ=55.74;MQ0=10;MQRankSum=-4.819;QD=23.75;ReadPosRankSum=4.518;VQSLOD=3.8080;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:15:21.07:451,21,0	1/1:9,0:9:12.51:280,13,0	0/0:19,0:10:27.09:0,27,605	0/0:20,0:13:27.01:0,27,514	1/1:21,0:21:20.33:369,20,0	1/1:24,0:23:21.07:506,21,0	1/1:17,0:17:9.03:197,9,0	1/1:8,0:7:9.03:129,9,0	1/1:18,0:18:36.12:815,36,0	1/1:11,0:11:25.33:422,25,0	1/1:12,0:12:6.02:140,6,0	1/1:11,0:11:15.05:367,15,0	1/1:15,0:15:24.08:570,24,0	1/1:7,0:7:12.04:292,12,0	1/1:23,0:23:29.89:545,30,0	1/1:9,0:9:15.05:373,15,0	0/0:20,0:20:7.74:0,8,48	0/1:16,0:16:13.61:14,0,28	1/1:9,15:23:24.88:672,25,0	0/0:20,0:21:9.83:0,10,136	0/1:16,0:15:5.95:6,0,48	1/1:11,0:11:15.05:314,15,0	1/1:18,0:16:12.18:294,12,0	1/1:15,0:15:6.91:134,7,0	1/1:5,0:4:3.01:74,3,0	1/1:18,0:18:38.77:596,39,0	1/1:16,0:16:18.06:437,18,0	1/1:7,0:7:9.03:223,9,0
chr10	30740445	.	CACAGAG	C	4709.49	PASS	AB=1.000;AC=48;AF=0.857;AN=56;BaseQRankSum=6.264;DP=448;FS=5.912;HRun=0;HaplotypeScore=168.4117;InbreedingCoeff=0.3220;MQ=52.72;MQ0=10;MQRankSum=-5.102;QD=11.40;ReadPosRankSum=5.601;VQSLOD=3.3824;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:20:20.64:286,21,0	1/1:10,0:10:12.51:168,13,0	0/0:17,0:8:13.77:0,14,141	0/0:18,0:12:23.55:0,24,203	1/1:21,0:21:20.33:229,20,0	1/1:25,0:24:21.07:310,21,0	1/1:17,0:17:9.02:113,9,0	1/1:13,0:12:8.20:42,8,0	1/1:18,0:18:36.10:479,36,0	1/1:13,0:13:22.92:184,23,0	1/1:13,0:13:6.02:84,6,0	1/1:11,0:11:15.05:227,15,0	1/1:17,0:17:23.92:349,24,0	1/1:8,0:8:14.84:193,15,0	0/1:27,0:27:53.33:53,0,70	1/1:9,0:9:15.05:233,15,0	1/1:1,16:17:6.02:145,6,0	1/1:1,14:16:9.03:168,9,0	0/1:25,0:24:35.64:154,0,36	0/1:23,0:23:19.33:19,0,72	0/1:15,0:14:5.95:6,0,41	1/1:11,0:11:15.05:203,15,0	1/1:20,0:18:12.19:182,12,0	1/1:15,0:15:6.49:78,6,0	1/1:6,0:5:3.01:46,3,0	1/1:19,0:19:32.87:349,33,0	1/1:17,0:17:17.57:269,18,0	1/1:7,0:7:9.03:139,9,0
chr10	30740709	.	TTGTGTGTGTGTGTATGTGTGTGTG	T	4234.47	PASS	AB=0.935;AC=16;AF=0.286;AN=56;BaseQRankSum=-0.929;DP=616;FS=0.000;HRun=0;HaplotypeScore=325.4925;InbreedingCoeff=0.1985;MQ=60.56;MQ0=8;MQRankSum=1.657;QD=14.86;ReadPosRankSum=0.308;VQSLOD=2.5528;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:38,0:38:20.77:21,0,1708	0/0:7,0:7:6.02:0,6,294	0/1:23,0:16:17.41:17,0,234	0/0:32,0:17:3.94:0,4,458	0/0:19,0:19:9.03:0,9,287	0/0:20,0:20:10.82:0,11,1375	0/1:25,0:25:14.66:15,0,2286	0/1:32,0:31:78.59:79,0,1347	0/0:24,0:24:15.05:0,15,728	0/0:28,0:28:0.81:0,1,2065	0/1:16,0:16:13.86:14,0,1055	0/0:21,0:21:19.84:0,20,1838	0/0:19,0:19:18.46:0,18,882	0/0:26,0:26:30.10:0,30,1417	1/1:4,0:38:39.60:850,40,0	0/0:23,0:23:30.56:0,31,1563	0/1:11,0:13:68.02:270,0,68	0/1:4,0:11:70.72:124,0,71	1/1:3,13:16:38.91:671,39,0	1/1:0,17:18:30.10:1827,30,0	1/1:4,21:25:6.02:340,6,0	0/0:14,0:14:12.04:0,12,587	0/0:22,0:22:12.93:0,13,583	0/0:27,0:27:6.49:0,6,255	0/0:17,0:17:21.07:0,21,940	0/1:24,0:24:8.77:9,0,1698	0/0:25,0:25:26.74:0,27,1065	0/0:7,0:7:12.04:0,12,517
chr10	30740713	.	GTGTGTGTGTA	G	8178.91	PASS	AB=0.991;AC=52;AF=0.929;AN=56;BaseQRankSum=1.190;DP=607;FS=1.821;HRun=0;HaplotypeScore=184.7004;InbreedingCoeff=-0.1024;MQ=55.57;MQ0=8;MQRankSum=-1.289;QD=13.47;ReadPosRankSum=1.329;VQSLOD=4.0530;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:36,0:36:51.81:437,52,0	1/1:8,0:8:6.02:72,6,0	1/1:27,0:13:16.11:98,16,0	0/1:33,0:14:31.72:32,0,177	1/1:3,15:18:9.03:260,9,0	1/1:18,1:19:35.99:476,36,0	0/1:25,1:26:95.98:452,0,96	1/1:27,0:26:20.76:414,21,0	1/1:26,0:26:15.05:181,15,0	1/1:30,0:30:24.09:349,24,0	1/1:16,0:16:35.76:341,36,0	1/1:19,1:20:8.92:400,9,0	1/1:18,0:18:18.17:217,18,0	1/1:27,1:28:30.09:416,30,0	1/1:37,0:37:39.13:945,39,0	0/1:24,0:24:27.43:92,0,27	1/1:13,0:13:20.88:252,21,0	0/1:9,0:9:5.16:66,0,5	1/1:16,0:16:35.90:383,36,0	1/1:18,0:18:29.69:656,30,0	1/1:22,0:22:6.02:101,6,0	1/1:11,0:11:5.91:104,6,0	1/1:22,0:22:11.27:144,11,0	1/1:24,2:26:5.62:130,6,0	1/1:20,0:20:21.07:291,21,0	1/1:24,0:24:6.83:290,7,0	1/1:23,3:26:22.92:463,23,0	1/1:7,0:7:12:120,12,0
chr10	30740715	.	GTGTGTGTA	G	11789.49	PASS	AB=1.000;AC=54;AF=0.964;AN=56;BaseQRankSum=1.383;DP=610;FS=2.771;HRun=0;HaplotypeScore=157.4745;InbreedingCoeff=-0.0569;MQ=51.65;MQ0=9;MQRankSum=-1.898;QD=19.33;ReadPosRankSum=1.985;VQSLOD=3.9111;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:36,2:38:57.83:620,58,0	1/1:0,9:9:6.02:163,6,0	1/1:27,0:11:16.11:98,16,0	0/1:33,0:12:31.72:32,0,177	1/1:18,0:18:9.03:179,9,0	1/1:15,6:21:42.01:801,42,0	1/1:19,6:25:2.07:734,2,0	1/1:25,0:24:59.77:490,60,0	1/1:2,24:26:15.05:407,15,0	1/1:2,26:28:53.61:687,54,0	1/1:11,7:18:38.78:617,39,0	1/1:16,6:22:48.89:679,49,0	1/1:3,15:18:18.40:489,18,0	1/1:2,26:28:30.10:789,30,0	1/1:37,0:37:39.13:763,39,0	1/1:22,3:25:20.88:358,21,0	1/1:12,0:12:20.88:224,21,0	0/1:9,0:9:2.52:53,0,3	1/1:17,0:16:35.90:355,36,0	1/1:18,0:18:27.56:521,28,0	1/1:21,0:21:5.89:73,6,0	1/1:2,9:11:12.04:283,12,0	1/1:0,21:21:11.33:325,11,0	1/1:3,22:25:5.70:142,6,0	1/1:1,20:21:21.07:548,21,0	1/1:5,19:24:47.10:561,47,0	1/1:6,20:26:23.11:589,23,0	1/1:5,2:7:12.01:211,12,0
chr10	30740717	.	GTGTGTA	G	9067.26	PASS	AB=1.000;AC=55;AF=0.982;AN=56;BaseQRankSum=2.683;DP=614;FS=3.244;HRun=0;HaplotypeScore=154.9705;InbreedingCoeff=-0.0431;MQ=50.86;MQ0=11;MQRankSum=-2.611;QD=14.77;ReadPosRankSum=2.543;VQSLOD=4.4652;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:38,0:38:60.38:533,60,0	1/1:9,0:9:6.02:96,6,0	1/1:28,0:10:15.69:98,16,0	0/1:33,0:11:31.72:32,0,177	1/1:19,0:19:12.02:162,12,0	1/1:22,0:22:47.92:565,48,0	1/1:25,0:25:44.82:641,45,0	1/1:25,0:24:62.72:509,63,0	1/1:26,0:26:15.05:241,15,0	1/1:28,0:28:53.42:529,53,0	1/1:19,0:19:38.76:426,39,0	1/1:25,0:25:60.34:598,60,0	1/1:18,0:18:18.39:290,18,0	1/1:28,0:28:30.10:476,30,0	1/1:36,0:36:39.03:581,39,0	1/1:6,19:25:27.53:529,28,0	1/1:12,0:12:20.88:196,21,0	1/1:9,0:9:2.91:44,3,0	1/1:15,0:14:35.89:327,36,0	1/1:18,0:18:27.09:394,27,0	1/1:22,0:21:4.57:47,5,0	1/1:11,0:11:11.97:163,12,0	1/1:21,0:21:11.84:193,12,0	1/1:25,0:25:5.75:95,6,0	1/1:21,0:21:21.07:335,21,0	1/1:24,0:24:47.80:441,48,0	1/1:26,0:26:23.54:382,24,0	1/1:6,0:6:12.01:144,12,0
chr10	30741529	.	CT	C	17408.68	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-2.793;DP=633;FS=9.001;HRun=5;HaplotypeScore=101.2358;InbreedingCoeff=0.9840;MQ=86.72;MQ0=0;MQRankSum=-10.104;QD=29.71;ReadPosRankSum=6.308;VQSLOD=4.1623;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,24:25:57.16:646,57,0	1/1:1,13:14:36.10:408,36,0	0/0:23,0:23:59.78:0,60,647	0/0:23,0:24:30.89:0,31,563	1/1:1,28:29:84.24:953,84,0	1/1:2,26:28:66.19:749,66,0	1/1:1,15:16:42.12:476,42,0	1/1:3,21:24:63.18:715,63,0	1/1:0,20:20:57.16:646,57,0	1/1:2,23:25:69.20:782,69,0	1/1:0,23:23:69.20:781,69,0	1/1:0,24:24:69.20:783,69,0	1/1:2,33:35:87.05:977,87,0	1/1:2,22:24:60.17:681,60,0	1/1:0,22:22:57.16:647,57,0	1/1:1,20:21:60.17:680,60,0	1/1:1,22:23:60.17:681,60,0	1/1:0,17:17:42.12:476,42,0	1/1:1,19:20:57.16:647,57,0	1/1:1,27:28:78.22:885,78,0	1/1:1,20:21:51.15:579,51,0	1/1:0,25:25:69.19:781,69,0	1/1:2,25:27:63.01:714,63,0	1/1:1,18:19:42.12:476,42,0	1/1:0,21:21:51.15:579,51,0	1/1:0,21:21:60.17:680,60,0	1/1:1,28:29:75.21:850,75,0	1/1:1,4:5:12.03:136,12,0
chr10	30742370	.	GA	G	11141.99	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-5.211;DP=523;FS=0.888;HRun=9;HaplotypeScore=57.3291;InbreedingCoeff=0.9850;MQ=76.29;MQ0=0;MQRankSum=-6.379;QD=22.42;ReadPosRankSum=4.712;VQSLOD=5.3736;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,14:17:40.09:341,40,0	1/1:1,11:12:30.01:275,30,0	0/0:14,0:14:32.77:0,33,358	0/0:11,1:12:14.45:0,14,207	1/1:3,19:22:51.02:467,51,0	1/1:4,26:30:74.99:678,75,0	1/1:5,11:16:30.01:275,30,0	1/1:7,29:36:86.97:780,87,0	1/1:1,12:13:36.02:330,36,0	1/1:5,24:29:72:652,72,0	1/1:2,20:22:54.02:494,54,0	1/1:2,14:16:42.02:384,42,0	1/1:0,21:21:56.87:522,57,0	1/1:1,17:18:48.02:439,48,0	1/1:0,15:15:42.02:384,42,0	1/1:3,17:20:42.02:384,42,0	1/1:1,17:18:45.02:412,45,0	1/1:1,14:15:42.02:384,42,0	1/1:4,11:15:33.01:302,33,0	1/1:3,19:22:57.03:521,57,0	1/1:1,13:14:33.02:302,33,0	1/1:3,11:14:33.01:302,33,0	1/1:2,14:16:32.80:302,33,0	1/1:1,23:24:66.04:604,66,0	1/1:1,13:14:36.02:329,36,0	1/1:4,21:25:59.96:537,60,0	1/1:3,24:27:62.98:577,63,0	1/1:0,6:6:18.01:165,18,0
chr10	30743275	.	AT	A	16115.91	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-0.498;DP=633;FS=3.024;HRun=7;HaplotypeScore=62.6963;InbreedingCoeff=0.9980;MQ=75.41;MQ0=0;MQRankSum=-7.597;QD=26.64;ReadPosRankSum=3.928;VQSLOD=5.6376;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,37:38:99:1041,102,0	1/1:0,10:10:30.07:306,30,0	0/0:17,0:17:30.05:0,30,355	0/0:11,0:11:29.78:0,30,306	1/1:1,33:34:84.18:857,84,0	1/1:1,22:23:66.15:673,66,0	1/1:1,14:15:36.08:367,36,0	1/1:3,37:40:99:1132,111,0	1/1:2,28:30:72.16:734,72,0	1/1:1,27:28:81.17:820,81,0	1/1:2,22:24:63.06:621,63,0	1/1:1,16:17:48.11:490,48,0	1/1:2,17:19:47.76:489,48,0	1/1:2,28:30:81.18:826,81,0	1/1:0,20:20:48.11:490,48,0	1/1:2,17:19:48.11:490,48,0	1/1:1,34:35:93.21:949,93,0	1/1:0,20:20:57.13:582,57,0	1/1:2,21:23:63.09:621,63,0	1/1:1,19:20:57.03:558,57,0	1/1:0,17:17:48.11:490,48,0	1/1:1,16:17:42.09:429,42,0	1/1:0,16:16:42.10:428,42,0	1/1:1,21:22:57.13:581,57,0	1/1:1,8:9:24.05:245,24,0	1/1:2,15:17:45.10:459,45,0	1/1:2,30:32:81.06:826,81,0	1/1:6,24:30:60.13:612,60,0
chr10	30743627	.	TAG	T	2033.34	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=12.083;DP=556;FS=0.000;HRun=0;HaplotypeScore=74.9800;InbreedingCoeff=0.9808;MQ=79.29;MQ0=1;MQRankSum=0.239;QD=19.93;ReadPosRankSum=1.888;VQSLOD=3.2177;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,114,1903	0/0:10,0:10:30.08:0,30,506	0/0:19,1:18:8.51:0,9,423	0/0:16,0:14:17.34:0,17,264	0/0:28,0:28:78.12:0,78,1264	0/0:12,0:12:36.07:0,36,572	0/0:20,0:20:51.09:0,51,799	0/0:30,0:30:84.11:0,84,1202	0/0:8,0:8:18.06:0,18,317	0/0:28,0:28:84.14:0,84,1413	0/0:22,0:22:66.10:0,66,1087	0/0:22,0:22:63.16:0,63,1016	0/0:11,0:11:33.10:0,33,563	0/0:18,0:18:54.17:0,54,902	0/0:28,0:28:83.49:0,83,1271	0/0:20,0:20:60.17:0,60,1017	1/1:31,0:31:64.58:240,65,0	1/1:23,1:24:47.66:236,48,0	1/1:0,14:14:39.12:574,39,0	1/1:0,15:15:39.02:510,39,0	1/1:2,16:18:44.74:650,45,0	0/0:15,0:15:39.10:0,39,631	0/0:18,0:18:51.17:0,51,831	0/0:16,0:16:48.04:0,48,787	0/0:16,0:16:48.12:0,48,766	0/0:18,0:18:54.14:0,54,810	0/0:25,0:25:69.19:0,69,1122	0/0:14,0:14:36.12:0,36,624
chr10	30743628	.	AG	A	2512.14	PASS	AB=0.950;AC=11;AF=0.196;AN=56;BaseQRankSum=12.008;DP=558;FS=0.000;HRun=1;HaplotypeScore=62.9930;InbreedingCoeff=0.8732;MQ=78.51;MQ0=1;MQRankSum=0.316;QD=20.93;ReadPosRankSum=1.563;VQSLOD=3.6987;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,110,1438	0/0:10,0:10:30.07:0,30,389	0/1:18,1:17:24.05:24,0,314	0/0:17,0:14:8.80:0,9,210	0/0:30,0:30:81.20:0,81,1040	0/0:12,0:12:36.06:0,36,442	0/0:20,0:20:58.36:0,58,682	0/0:30,0:30:87.18:0,87,1034	0/0:8,0:8:18.06:0,18,245	0/0:28,0:28:72.78:0,73,1063	0/0:23,0:23:65.60:0,66,855	0/0:23,0:23:63.03:0,63,795	0/0:11,0:11:33.10:0,33,432	0/0:19,0:19:57.10:0,57,692	0/0:28,0:28:78.40:0,78,967	0/0:20,0:20:60.16:0,60,781	1/1:0,31:31:75.25:1038,75,0	1/1:2,21:23:57.13:750,57,0	1/1:14,0:14:38.70:278,39,0	1/1:15,0:15:38.49:264,38,0	1/1:17,1:18:45.14:337,45,0	0/0:14,0:14:39.10:0,39,484	0/0:18,0:18:51.01:0,51,610	0/0:16,0:16:44.55:0,45,595	0/0:16,0:16:48.11:0,48,602	0/0:18,0:18:54.13:0,54,651	0/0:25,0:25:69.17:0,69,897	0/0:14,0:14:36.11:0,36,469
chr10	30744167	.	GACTCCTTACATCCCATAAGAGA	G	2346.23	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.068;DP=711;FS=7.886;HRun=0;HaplotypeScore=380.1887;InbreedingCoeff=0.9919;MQ=89.17;MQ0=1;MQRankSum=-6.043;QD=83.79;ReadPosRankSum=2.039;VQSLOD=2.3744;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,157,14394	0/0:7,0:7:21.07:0,21,2156	0/0:28,0:28:84.23:0,84,4960	0/0:30,0:30:81.25:0,81,4941	0/0:35,0:35:96.33:0,96,8771	0/0:23,0:23:69.24:0,69,6830	0/0:31,0:31:93.32:0,93,8380	0/0:30,0:30:90.29:0,90,7757	0/0:28,0:28:84.27:0,84,7880	0/0:31,0:31:90.29:0,90,8351	0/0:19,0:19:57.17:0,57,4870	0/0:17,0:17:51.18:0,51,4604	0/0:25,0:25:75.24:0,75,6733	0/0:26,0:26:78.25:0,78,7163	1/1:0,28:28:39.13:2441,39,0	0/0:19,0:19:57.16:0,57,4646	0/0:21,0:21:63.19:0,63,5534	0/0:26,0:26:78.23:0,78,7504	0/0:13,0:13:39.12:0,39,2777	0/0:22,0:22:63.22:0,63,5845	0/0:32,0:31:90.28:0,90,7585	0/0:23,0:23:63.22:0,63,5907	0/0:20,0:20:51.16:0,51,4553	0/0:27,0:27:81.28:0,81,7651	0/0:19,0:19:51.18:0,51,4992	0/0:31,0:31:87.30:0,87,7851	0/0:41,0:41:99:0,121,11299	0/0:7,0:7:21.07:0,21,1306
chr10	30746945	.	AG	A	16473.73	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=4.315;DP=632;FS=0.000;HRun=6;HaplotypeScore=131.5024;InbreedingCoeff=0.9819;MQ=83.94;MQ0=0;MQRankSum=-9.553;QD=28.06;ReadPosRankSum=6.014;VQSLOD=2.9255;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,40:45:99:1256,117,0	1/1:0,4:4:12.03:129,12,0	0/0:25,0:25:45.50:0,45,670	0/0:20,0:20:36.36:0,36,534	1/1:3,24:27:60.15:644,60,0	1/1:2,21:23:57.14:613,57,0	1/1:0,30:30:87.22:935,87,0	1/1:2,23:25:63.10:644,63,0	1/1:0,14:14:39.10:419,39,0	1/1:5,19:24:63.13:662,63,0	1/1:2,14:16:48.12:515,48,0	1/1:3,21:24:63.16:677,63,0	1/1:3,27:30:81.20:870,81,0	1/1:1,22:23:60.15:645,60,0	1/1:2,27:29:81.20:869,81,0	1/1:1,23:24:63.16:677,63,0	1/1:1,30:31:84.21:903,84,0	1/1:1,10:11:30.08:322,30,0	1/1:0,18:18:48.10:508,48,0	1/1:3,21:24:57.14:608,57,0	1/1:2,30:32:81.20:870,81,0	1/1:1,22:23:54.14:580,54,0	1/1:1,17:18:48.12:515,48,0	1/1:2,17:19:45.11:483,45,0	1/1:2,19:21:54.13:580,54,0	1/1:2,23:25:69.17:741,69,0	1/1:1,18:19:54.13:580,54,0	1/1:0,8:8:21.05:226,21,0
chr10	30748925	.	T	TGAGAGAGAGAGA	5949.21	PASS	AB=0.909;AC=46;AF=0.958;AN=48;DP=461;FS=0.000;HRun=0;HaplotypeScore=140.7082;InbreedingCoeff=0.2346;MQ=80.92;MQ0=37;QD=16.90;VQSLOD=3.2592;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:26:1.36:3,1,0	1/1:3,0:3:3.01:64,3,0	1/1:74,0:30:1.25:3,1,0	./.	1/1:10,0:10:2.95:59,3,0	1/1:10,0:9:3.01:143,3,0	1/1:18,0:18:9.03:323,9,0	1/1:9,0:9:6.01:104,6,0	1/1:9,2:13:6.42:278,6,0	1/1:16,0:19:21.94:652,22,0	./.	1/1:9,0:9:6:80,6,0	1/1:11,5:16:12.04:589,12,0	1/1:9,0:8:3.01:67,3,0	1/1:10,0:11:3.48:57,3,0	1/1:15,0:16:20.98:633,21,0	1/1:12,0:11:21.07:605,21,0	1/1:9,0:8:6.02:197,6,0	1/1:12,0:11:9.03:367,9,0	./.	1/1:13,0:11:6.02:128,6,0	1/1:5,0:5:3.01:86,3,0	0/1:6,0:6:0:0,0,0	0/1:7,0:8:0.25:0,0,0	1/1:11,0:11:0.94:1,1,0	1/1:13,0:13:31.30:916,31,0	1/1:12,0:12:15.05:590,15,0	./.
chr10	30748969	.	GAT	G	182.80	PASS	AB=0.667;AC=3;AF=0.056;AN=54;BaseQRankSum=3.347;DP=325;FS=2.229;HRun=0;HaplotypeScore=71.4514;InbreedingCoeff=0.2920;MQ=56.85;MQ0=26;MQRankSum=-3.641;QD=11.43;ReadPosRankSum=-0.321;VQSLOD=3.3947;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:19:23.78:0,24,470	0/0:3,0:3:8.52:0,9,130	0/0:58,1:26:44.68:0,45,1129	0/0:61,0:17:38.92:0,39,694	0/0:10,0:10:8.39:0,8,129	0/0:6,0:6:6.02:0,6,121	0/0:16,0:15:24.59:0,25,464	0/0:5,0:5:12.04:0,12,223	0/0:7,0:7:11.95:0,12,242	0/0:9,0:9:27.09:0,27,547	0/0:7,0:7:2.81:0,3,60	0/0:7,0:7:13.46:0,13,221	0/0:6,0:5:9.03:0,9,179	0/0:9,0:8:14.21:0,14,296	0/0:8,0:8:3.12:0,3,180	0/0:12,0:11:14.76:0,15,334	1/1:4,6:9:7.19:147,7,0	0/1:3,3:6:8.57:129,0,9	0/0:8,0:7:24.03:0,24,429	0/0:5,0:4:9.03:0,9,178	0/0:10,0:6:6.02:0,6,121	0/0:4,0:3:4.83:0,5,66	0/0:3,0:3:3.01:0,3,61	0/0:5,0:5:0:0,0,0	0/0:4,0:4:2.91:0,3,61	0/0:13,0:13:32.88:0,33,619	0/0:9,0:9:11.88:0,12,242	./.
chr10	30750468	.	GAA	G	19603.94	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-7.008;DP=817;FS=1.525;HRun=9;HaplotypeScore=117.6332;InbreedingCoeff=0.9997;MQ=81.44;MQ0=2;MQRankSum=-5.258;QD=30.07;ReadPosRankSum=3.447;VQSLOD=4.5692;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,40:41:99:1328,114,0	1/1:1,10:10:27.08:315,27,0	0/0:26,0:26:56.67:0,57,832	0/0:23,0:26:39.82:0,40,648	1/1:1,27:28:63.17:734,63,0	1/1:2,14:16:33.09:385,33,0	1/1:5,32:37:87.24:1014,87,0	1/1:5,29:34:87.24:1014,87,0	1/1:1,33:34:87.25:1014,87,0	1/1:3,42:45:99:1467,126,0	1/1:1,23:24:63.18:734,63,0	1/1:3,31:34:87.25:1014,87,0	1/1:2,26:28:72.21:839,72,0	1/1:4,32:36:99:1140,99,0	0/0:36,0:36:99:0,102,1650	1/1:1,23:24:69.20:804,69,0	1/1:3,27:30:75.17:859,75,0	1/1:3,21:24:63.18:734,63,0	0/0:3,0:25:54.90:0,55,194	0/0:2,0:28:65.35:0,65,239	0/0:2,0:23:47.41:0,47,167	1/1:1,33:34:87.24:1014,87,0	1/1:2,33:35:99:1152,99,0	1/1:2,30:32:67.34:959,67,0	1/1:1,22:22:48.14:559,48,0	1/1:1,25:26:75.19:849,75,0	1/1:3,42:45:99:1293,111,0	1/1:0,11:11:33.10:384,33,0
chr10	30752103	.	ATCTC	A	10914.22	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=5.565;DP=742;FS=5.526;HRun=0;HaplotypeScore=191.7997;InbreedingCoeff=0.9487;MQ=57.61;MQ0=11;MQRankSum=0.717;QD=20.87;ReadPosRankSum=1.759;VQSLOD=3.9038;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,11:26:24.08:387,24,0	1/1:2,2:4:9.03:149,9,0	0/0:54,0:18:32.98:0,33,538	0/0:59,0:31:47.37:0,47,657	1/1:13,15:28:16.50:260,16,0	1/1:12,7:19:11.40:199,11,0	1/1:18,9:27:44.29:722,44,0	1/1:18,7:25:39.04:587,39,0	1/1:6,14:20:14.70:238,15,0	1/1:12,16:28:72.23:1135,72,0	1/1:13,10:23:38.49:654,38,0	1/1:4,24:28:10.99:160,11,0	1/1:15,14:29:56.85:895,57,0	1/1:20,12:32:26.97:426,27,0	0/0:37,0:37:96.27:0,96,2044	1/1:9,12:21:26.87:432,27,0	1/1:6,18:24:32.60:515,33,0	1/1:3,20:23:33.11:543,33,0	0/0:15,0:13:29.69:0,30,560	0/0:20,0:20:35.30:0,35,627	0/0:34,0:33:60.21:0,60,1339	1/1:9,25:34:23.01:398,23,0	1/1:15,15:30:44.57:714,45,0	1/1:16,2:18:17.87:302,18,0	1/1:12,15:27:13.87:254,14,0	1/1:18,15:33:89.44:1497,89,0	1/1:10,7:17:20.68:314,21,0	1/1:4,1:5:9.03:133,9,0
chr10	30752135	.	TAC	T	6538.77	PASS	AB=0.833;AC=40;AF=0.741;AN=54;BaseQRankSum=-1.256;DP=736;FS=6.506;HRun=0;HaplotypeScore=196.8843;InbreedingCoeff=0.6757;MQ=49.15;MQ0=24;MQRankSum=-2.141;QD=12.06;ReadPosRankSum=-1.713;VQSLOD=3.7646;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,15:28:9.03:109,9,0	1/1:1,7:8:2.96:36,3,0	./.	0/0:35,0:9:9.03:0,9,119	1/1:2,29:31:5.90:73,6,0	1/1:2,20:22:9.02:110,9,0	1/1:10,20:30:2.55:36,3,0	1/1:22,17:28:38.21:430,38,0	1/1:20,7:27:45.11:541,45,0	1/1:14,19:29:29.83:822,30,0	1/1:23,7:30:45.14:553,45,0	1/1:10,13:23:24.47:267,24,0	1/1:17,8:25:34.39:435,34,0	1/1:8,17:25:5.91:72,6,0	0/0:29,0:29:75.24:0,75,1174	1/1:4,23:27:27.05:316,27,0	0/0:21,0:21:38.28:0,38,616	0/0:25,0:24:35.31:0,35,498	0/1:18,0:17:6.73:7,0,135	0/0:6,0:21:24.11:0,24,166	0/0:14,0:41:9.46:0,9,77	0/1:16,15:32:18.02:284,0,18	1/1:14,11:24:27:307,27,0	1/1:14,5:19:24.07:291,24,0	1/1:19,5:24:6.12:303,6,0	1/1:13,29:40:96.11:1118,96,0	1/1:2,14:16:17.72:191,18,0	1/1:7,1:8:21.05:240,21,0
chr10	30752453	.	T	TA	11234.15	PASS	AB=0.786;AC=44;AF=0.786;AN=56;BaseQRankSum=3.217;DP=528;FS=15.844;HRun=9;HaplotypeScore=72.3922;InbreedingCoeff=0.7726;MQ=65.59;MQ0=0;MQRankSum=-1.876;QD=25.77;ReadPosRankSum=3.461;VQSLOD=3.9897;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,32:33:87.23:960,87,0	0/1:2,6:8:18.43:175,0,18	0/0:15,0:14:34.81:0,35,291	0/1:8,0:8:5.54:6,0,109	1/1:5,25:31:58:846,58,0	1/1:2,15:17:45.12:498,45,0	1/1:3,17:20:39.11:431,39,0	1/1:4,24:28:72.18:788,72,0	1/1:2,9:11:4.03:273,4,0	1/1:3,16:19:51.08:533,51,0	1/1:5,16:21:51.09:542,51,0	1/1:0,14:14:33.09:365,33,0	1/1:1,13:14:30.08:332,30,0	1/1:4,15:19:23.90:443,24,0	0/0:13,0:13:38.92:0,39,324	1/1:1,22:23:60.16:664,60,0	1/1:5,18:23:48.13:531,48,0	1/1:3,14:17:33.09:365,33,0	0/0:19,0:19:53.99:0,54,469	0/0:26,0:26:38.88:0,39,566	0/0:19,0:19:24.37:0,24,359	1/1:1,11:12:7.04:306,7,0	1/1:5,13:18:36.09:393,36,0	1/1:4,14:18:39.11:431,39,0	1/1:0,19:19:51.14:564,51,0	1/1:4,25:29:60.80:793,61,0	1/1:2,19:21:57.15:631,57,0	1/1:0,12:12:33.09:365,33,0
chr10	30753271	.	T	TGTAA	44013.21	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-11.965;DP=1041;FS=0.880;HRun=0;HaplotypeScore=175.9416;InbreedingCoeff=0.9998;MQ=57.96;MQ0=1;MQRankSum=-5.490;QD=55.29;ReadPosRankSum=1.739;VQSLOD=5.9077;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,33:47:95.23:2467,95,0	1/1:1,17:19:44.96:1048,45,0	0/0:47,0:40:99:0,120,2125	0/0:31,0:30:71.63:0,72,1380	1/1:3,29:33:81.04:1802,81,0	1/1:2,29:32:75.18:1931,75,0	1/1:9,22:35:50.47:1166,50,0	1/1:5,41:51:99:3291,135,0	1/1:2,38:43:99:2335,99,0	1/1:0,48:49:99:3818,147,0	1/1:0,30:33:89.96:1921,90,0	1/1:3,36:39:84.20:2177,84,0	1/1:4,35:41:96.09:2255,96,0	1/1:4,38:43:99:1942,102,0	0/0:44,0:44:99:0,129,2414	1/1:4,44:49:99:2833,108,0	1/1:1,27:30:27.38:1329,27,0	1/1:4,13:18:47.47:1269,47,0	0/0:17,0:17:48.15:0,48,888	0/0:42,0:42:99:0,125,2362	0/0:64,0:64:99:0,187,3451	1/1:3,35:43:99:2376,114,0	1/1:3,33:36:80.88:1659,81,0	1/1:2,29:31:51.33:1398,51,0	1/1:3,26:31:65.88:1310,66,0	1/1:4,35:39:99:2671,111,0	1/1:1,31:35:84.07:1988,84,0	1/1:1,17:18:42.08:1028,42,0
chr10	30753273	.	T	TAA	13246.01	PASS	AB=0.993;AC=30;AF=0.536;AN=56;BaseQRankSum=12.251;DP=1004;FS=36.280;HRun=0;HaplotypeScore=239.7600;InbreedingCoeff=-0.0228;MQ=57.74;MQ0=1;MQRankSum=-2.833;QD=17.73;ReadPosRankSum=11.303;VQSLOD=2.7956;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:45,4:48:33.17:865,0,33	0/1:20,0:20:57.49:310,0,57	0/0:49,0:42:99:0,126,1991	0/0:35,0:34:74.49:0,74,1262	0/1:31,0:31:88.50:522,0,88	1/1:29,0:29:44.23:637,44,0	1/1:28,0:28:7.64:322,8,0	0/1:47,0:47:9.31:1027,0,9	0/1:37,0:37:55.84:679,0,56	1/1:48,0:48:99:1236,130,0	0/1:32,0:32:99:558,0,124	1/1:35,0:35:10.50:676,11,0	0/1:39,1:40:99:631,0,129	0/1:41,0:41:99:521,0,236	0/0:44,0:44:99:0,129,2044	1/1:44,0:44:3.61:850,4,0	0/1:28,0:28:9.10:411,0,9	1/1:18,0:18:46.03:448,46,0	0/0:18,0:18:51.17:0,51,829	0/0:43,0:43:99:0,121,1996	0/0:68,0:68:99:0,195,3022	0/1:40,0:40:99:641,0,191	0/1:34,0:34:99:466,0,134	1/1:32,0:32:8.69:432,9,0	0/1:30,0:30:99:348,0,138	1/1:33,0:33:54.32:747,54,0	0/1:33,0:33:7.12:622,0,7	0/1:18,0:18:20.38:296,0,20
chr10	30753805	.	AGT	A	3128.85	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.854;DP=1009;FS=4.228;HRun=0;HaplotypeScore=152.5096;InbreedingCoeff=0.9944;MQ=64.42;MQ0=4;MQRankSum=-0.162;QD=28.19;ReadPosRankSum=-0.243;VQSLOD=4.6067;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:75.21:0,75,1189	0/0:9,0:9:24.08:0,24,401	0/0:48,1:47:52.62:0,53,1309	0/0:42,0:38:47.09:0,47,955	0/0:35,0:35:90.31:0,90,1491	0/0:23,0:23:57.19:0,57,950	0/0:26,0:26:72.25:0,72,1201	0/0:42,0:42:96.29:0,96,1549	0/0:45,0:45:99:0,114,1902	0/0:46,0:46:99:0,105,1842	0/0:35,0:35:96.33:0,96,1599	0/0:34,0:34:96.31:0,96,1544	0/0:43,0:42:93.32:0,93,1547	0/0:30,0:30:81.23:0,81,1277	0/0:52,0:52:99:0,135,2223	0/0:45,0:45:69.69:0,70,1623	0/0:27,0:27:45.08:0,45,891	0/0:27,0:26:65.21:0,65,1014	1/1:2,12:14:36.06:426,36,0	1/1:2,34:35:90.25:1128,90,0	1/1:6,55:61:99:1718,135,0	0/0:44,0:44:96.31:0,96,1584	0/0:18,1:19:15.78:0,16,775	0/0:40,0:40:90.20:0,90,1489	0/0:35,0:35:93.31:0,93,1523	0/0:49,0:49:99:0,124,2028	0/0:36,0:36:96.33:0,96,1606	0/0:34,0:31:76.58:0,77,1177
chr10	30753880	.	ATG	A	18443.86	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=9.055;DP=993;FS=0.000;HRun=0;HaplotypeScore=145.2402;InbreedingCoeff=0.9943;MQ=63.72;MQ0=10;MQRankSum=0.155;QD=25.62;ReadPosRankSum=4.367;VQSLOD=5.7935;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,29:37:59.71:1035,60,0	1/1:0,6:6:18.06:223,18,0	0/0:51,0:40:63.69:0,64,1075	0/0:48,0:38:46.29:0,46,793	1/1:6,33:39:81.73:1004,82,0	1/1:10,25:35:54.23:837,54,0	1/1:2,28:30:72.23:892,72,0	1/1:11,31:42:68.49:1005,68,0	1/1:8,36:43:84.26:1041,84,0	1/1:7,42:49:99:1455,123,0	1/1:3,24:28:63.19:781,63,0	1/1:3,23:26:51.16:632,51,0	1/1:8,38:46:99:1278,105,0	1/1:3,24:27:66.21:818,66,0	0/0:43,0:43:90.55:0,91,1736	1/1:6,32:37:69.22:855,69,0	1/1:3,28:30:14.04:626,14,0	1/1:6,13:18:41:502,41,0	0/0:17,0:17:36.11:0,36,553	0/0:38,0:38:89.81:0,90,1440	0/0:73,3:76:50.93:0,51,2348	1/1:1,38:39:75.23:930,75,0	1/1:5,24:29:55.15:770,55,0	1/1:7,37:44:93.29:1153,93,0	1/1:7,25:32:63.20:781,63,0	1/1:6,20:26:57.11:673,57,0	1/1:8,20:28:51.03:631,51,0	1/1:6,18:21:41.16:519,41,0
chr10	30754773	.	T	TC	19873.87	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-13.706;DP=614;FS=0.344;HRun=0;HaplotypeScore=54.8223;InbreedingCoeff=0.9987;MQ=81.79;MQ0=0;MQRankSum=-4.900;QD=43.20;ReadPosRankSum=4.781;VQSLOD=4.9964;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,39:39:99:1630,102,0	1/1:0,9:9:24.08:384,24,0	0/0:18,0:17:48.12:0,48,617	0/0:16,0:16:48.09:0,48,614	1/1:1,23:24:60.20:959,60,0	1/1:0,11:11:30.10:480,30,0	1/1:1,31:32:78.27:1247,78,0	1/1:0,22:22:66.20:1010,66,0	1/1:0,22:22:60.20:959,60,0	1/1:0,22:22:66.23:1056,66,0	1/1:0,11:11:30.10:480,30,0	1/1:0,22:22:63.21:1005,63,0	1/1:0,16:16:45.15:719,45,0	1/1:2,23:25:66.22:1055,66,0	0/0:30,0:30:90.27:0,90,1210	1/1:1,27:28:75.26:1199,75,0	1/1:0,27:27:81.28:1295,81,0	1/1:2,17:19:51.17:815,51,0	0/0:23,0:23:66.21:0,66,908	0/0:20,0:20:60.18:0,60,809	0/0:47,0:47:99:0,141,1954	1/1:0,16:16:42.14:672,42,0	1/1:1,8:9:24.08:384,24,0	1/1:3,34:37:93.32:1487,93,0	1/1:0,14:14:39.13:623,39,0	1/1:0,22:22:63.19:977,63,0	1/1:0,22:22:63.21:1007,63,0	1/1:0,11:11:27.09:432,27,0
chr10	30755348	.	GA	G	1255.90	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-8.245;DP=565;FS=0.547;HRun=9;HaplotypeScore=89.0897;InbreedingCoeff=0.9977;MQ=77.63;MQ0=0;MQRankSum=1.092;QD=21.65;ReadPosRankSum=0.254;VQSLOD=4.0157;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,105,1202	0/0:16,0:16:48.14:0,48,552	0/0:13,0:13:27.08:0,27,308	0/0:22,0:22:45.05:0,45,462	0/0:16,0:16:42.11:0,42,470	0/0:22,0:21:57.16:0,57,649	0/0:20,0:20:57.17:0,57,658	0/0:29,0:29:72.20:0,72,820	0/0:22,0:22:63.19:0,63,726	0/0:19,0:19:48.14:0,48,553	0/0:19,0:19:45.13:0,45,519	0/0:20,1:21:29.66:0,30,577	0/0:23,0:23:60.18:0,60,690	0/0:17,0:17:45.13:0,45,519	0/0:23,0:23:63.17:0,63,715	0/0:14,0:15:38.95:0,39,430	0/0:30,0:31:81.07:0,81,913	0/0:21,0:21:57.04:0,57,604	1/1:3,18:21:51.01:465,51,0	1/1:2,15:17:45.02:412,45,0	1/1:0,20:20:57.03:522,57,0	0/0:23,0:23:66.15:0,66,744	0/0:12,0:12:30.08:0,30,335	0/0:23,0:23:57.62:0,58,644	0/0:16,0:16:48.13:0,48,545	0/0:18,0:18:42.12:0,42,483	0/0:23,0:23:66.18:0,66,750	0/0:8,0:8:21.06:0,21,242
chr10	30755462	.	C	CTG	329.51	PASS	AB=0.989;AC=26;AF=0.650;AN=40;BaseQRankSum=1.508;DP=499;FS=0.000;HRun=0;HaplotypeScore=99.0699;InbreedingCoeff=0.3178;MQ=62.44;MQ0=19;MQRankSum=-0.931;QD=1.10;ReadPosRankSum=-2.663;VQSLOD=1.4511;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	0/1:4,0:4:0:0,0,0	./.	./.	./.	0/0:10,0:9:0:0,0,0	1/1:16,0:16:3:25,3,0	0/1:20,0:17:0:0,0,0	1/1:18,0:18:2.80:13,3,0	1/1:18,0:17:8.59:54,9,0	./.	0/1:17,0:16:0:0,0,0	1/1:17,1:17:9.71:97,10,0	0/1:18,0:18:0:0,0,0	0/1:9,1:10:28.56:29,0,85	./.	0/0:29,0:29:11.49:0,11,61	0/0:15,0:17:14.11:0,14,68	0/1:17,0:15:0:0,0,0	./.	0/1:40,0:38:13.12:13,0,29	1/1:22,1:23:4.24:30,4,0	0/1:11,0:11:0:0,0,0	1/1:19,2:19:5.76:85,6,0	./.	1/1:23,0:22:3.89:28,4,0	1/1:18,0:19:9.46:61,9,0	1/1:6,0:5:0.47:1,0,0
chr10	30755526	.	C	CAG	1933.13	PASS	AB=0.791;AC=32;AF=0.593;AN=54;BaseQRankSum=8.279;DP=551;FS=5.426;HRun=0;HaplotypeScore=142.3432;InbreedingCoeff=0.3549;MQ=50.46;MQ0=31;MQRankSum=-4.095;QD=6.44;ReadPosRankSum=-4.615;VQSLOD=1.6427;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:6,4:14:5.28:62,5,0	1/1:2,2:6:5.66:37,6,0	0/0:62,0:21:25.65:0,26,481	0/0:85,0:35:55.71:0,56,712	1/1:13,4:17:3.01:46,3,0	1/1:8,3:12:11.09:100,11,0	1/1:14,2:15:2.69:47,3,0	0/1:6,0:6:39.98:40,0,47	0/1:9,2:16:5.88:7,0,6	0/1:10,4:13:40.83:276,0,41	0/1:5,2:6:0:0,0,0	1/1:9,6:15:11.96:107,12,0	0/1:16,4:22:45.58:101,0,46	1/1:7,3:18:18.45:139,18,0	0/0:23,0:23:47.91:0,48,623	1/1:7,3:13:14.99:158,15,0	0/1:14,1:13:28.20:105,0,28	0/1:13,2:13:88.42:88,0,156	0/0:13,0:12:33.05:0,33,402	0/0:15,0:14:42.12:0,42,542	0/0:28,0:26:44.86:0,45,569	./.	0/1:7,2:9:0:0,0,0	0/1:10,3:20:0.11:0,0,0	0/1:8,2:13:0.01:0,0,0	1/1:7,7:17:45.78:529,46,0	1/1:8,5:16:15.74:175,16,0	1/1:2,4:7:6.02:84,6,0
chr10	30755534	.	CAGAGG	C	804.65	PASS	AB=0.896;AC=10;AF=0.179;AN=56;BaseQRankSum=4.752;DP=569;FS=1.601;HRun=0;HaplotypeScore=166.7022;InbreedingCoeff=-0.1971;MQ=50.27;MQ0=24;MQRankSum=-3.732;QD=5.96;ReadPosRankSum=2.953;VQSLOD=2.5243;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:12,2:14:9.18:0,9,102	0/1:4,2:6:27.16:49,0,27	0/0:75,0:23:57.09:0,57,1175	0/0:101,0:38:58.64:0,59,1690	0/0:16,3:18:6.02:0,6,148	0/0:9,2:10:13.45:0,13,119	0/0:14,2:15:5.37:0,5,93	0/1:7,0:7:22.33:22,0,264	0/0:14,2:16:4.35:0,4,69	0/1:14,3:16:99:225,0,539	0/0:9,2:10:5.89:0,6,144	0/1:18,1:17:28.74:29,0,417	0/1:20,3:23:99:196,0,194	0/0:20,1:21:31.56:0,32,381	0/0:23,0:23:60.19:0,60,1726	0/0:11,0:12:8.97:0,9,339	0/1:12,3:13:91.81:92,0,174	0/1:9,1:9:55.20:55,0,284	0/0:12,0:12:30.10:0,30,848	0/0:15,0:14:42.14:0,42,1287	0/0:22,0:21:41.98:0,42,1271	0/0:19,4:23:6.02:0,6,134	0/0:9,3:12:0:0,0,0	0/0:18,0:17:5.68:0,6,98	0/0:11,1:12:0.84:0,1,2	0/1:15,1:16:72.18:72,0,626	0/1:13,3:16:99:192,0,215	0/1:6,0:6:9.72:10,0,175
chr10	30755551	.	CAG	C	4463.84	PASS	AC=42;AF=0.778;AN=54;BaseQRankSum=7.513;DP=576;FS=5.742;HRun=0;HaplotypeScore=143.6315;InbreedingCoeff=0.7799;MQ=48.07;MQ0=19;MQRankSum=-4.744;QD=14.93;ReadPosRankSum=2.291;VQSLOD=4.2822;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,11:15:12.02:137,12,0	1/1:2,5:7:5.62:61,6,0	0/0:70,1:20:18.82:0,19,212	0/0:112,0:38:15.93:0,16,552	1/1:4,15:19:8.79:114,9,0	1/1:3,7:9:18.04:205,18,0	1/1:6,11:16:5.42:76,5,0	1/1:5,4:8:24.07:288,24,0	1/1:5,15:20:14.77:181,15,0	1/1:4,14:18:41.16:512,41,0	1/1:2,7:8:6.02:76,6,0	1/1:2,16:17:29.95:365,30,0	1/1:8,8:15:17.61:217,18,0	1/1:3,16:19:8.17:248,8,0	0/0:24,0:24:63.20:0,63,1018	1/1:1,12:13:27.08:333,27,0	1/1:6,8:13:2.85:126,3,0	1/1:2,4:5:12.04:152,12,0	0/0:16,1:16:6.85:0,7,564	0/0:17,0:17:48.15:0,48,753	0/0:22,0:22:41.82:0,42,633	1/1:7,12:19:6.02:76,6,0	./.	1/1:5,11:16:6.36:77,6,0	1/1:4,7:11:5.92:72,6,0	1/1:2,17:19:52.80:645,53,0	1/1:4,12:16:14.75:277,15,0	1/1:2,6:8:18.06:226,18,0
chr10	30755610	.	G	GGAGA	5831.96	PASS	AB=0.688;AC=41;AF=0.732;AN=56;BaseQRankSum=-2.826;DP=482;FS=15.350;HRun=0;HaplotypeScore=114.7744;InbreedingCoeff=0.6385;MQ=52.24;MQ0=14;MQRankSum=-0.456;QD=19.57;ReadPosRankSum=-0.143;VQSLOD=3.7133;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,0:15:3.89:31,4,0	1/1:2,6:8:9.03:203,9,0	0/0:42,0:18:21.02:0,21,306	0/0:66,0:18:3.32:0,3,177	1/1:14,4:18:15.05:382,15,0	1/1:1,8:10:6.02:135,6,0	1/1:19,1:18:24.08:588,24,0	1/1:4,13:17:33.03:583,33,0	1/1:3,13:17:3.01:68,3,0	1/1:13,4:18:45.12:922,45,0	1/1:4,1:5:6.01:101,6,0	1/1:10,4:15:9.03:229,9,0	1/1:8,1:9:15.05:371,15,0	1/1:7,6:12:6.47:95,6,0	0/0:18,0:18:48.16:0,48,840	1/1:10,4:14:9.02:172,9,0	0/1:10,0:10:41.45:146,0,41	1/1:8,0:8:9:106,9,0	0/0:14,0:13:26.94:0,27,302	0/0:17,0:17:39.11:0,39,480	0/0:27,0:26:26.83:0,27,327	1/1:7,4:10:6.02:153,6,0	0/1:2,14:18:0:0,0,0	1/1:12,2:13:7.87:120,8,0	0/1:1,7:8:0:0,0,0	1/1:14,4:17:43.90:900,44,0	1/1:8,12:20:23.79:380,24,0	1/1:1,6:6:6.02:146,6,0
chr10	30755619	.	G	GAGAC	4184.45	PASS	AB=1.000;AC=37;AF=0.685;AN=54;BaseQRankSum=3.279;DP=446;FS=3.574;HRun=0;HaplotypeScore=102.1531;InbreedingCoeff=0.4406;MQ=48.82;MQ0=15;MQRankSum=-0.198;QD=14.73;ReadPosRankSum=2.359;VQSLOD=3.4528;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:17,0:16:11.08:21,0,11	1/1:6,0:6:9.03:142,9,0	0/0:29,0:11:20.31:0,20,314	0/0:46,0:12:2.71:0,3,153	1/1:17,0:17:15.05:260,15,0	1/1:12,0:11:6.02:99,6,0	1/1:18,0:16:3.80:371,4,0	0/1:19,0:18:47.18:228,0,47	0/1:18,0:18:9.11:96,0,9	1/1:19,0:20:2.66:624,3,0	1/1:6,0:5:6.02:99,6,0	1/1:14,0:14:11.90:175,12,0	1/1:10,0:10:20.63:297,21,0	1/1:11,0:10:6.47:77,6,0	0/0:19,0:19:51.16:0,51,913	1/1:14,0:13:11.97:148,12,0	1/1:10,0:10:2.14:253,2,0	1/1:3,6:9:9.89:147,10,0	0/0:12,0:10:6.34:0,6,76	0/0:19,0:19:37.33:0,37,231	0/0:27,0:25:25.28:0,25,124	1/1:10,0:9:5.92:106,6,0	0/1:17,0:17:0.01:0,0,0	1/1:12,0:12:7.48:82,7,0	./.	1/1:18,0:17:13.56:610,14,0	0/1:18,0:18:1.72:220,0,2	1/1:7,0:6:9:129,9,0
chr10	30755623	.	CAGAGAGAGAGAG	C	224.80	PASS	AB=1.000;AC=6;AF=0.115;AN=52;BaseQRankSum=2.205;DP=460;FS=4.535;HRun=0;HaplotypeScore=142.8333;InbreedingCoeff=0.3647;MQ=47.90;MQ0=15;MQRankSum=-0.896;QD=3.46;ReadPosRankSum=1.299;VQSLOD=2.6733;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:9.03:0,9,361	0/0:6,0:6:9.03:0,9,346	./.	0/0:42,0:10:0.47:0,0,1	0/0:19,0:19:12.03:0,12,296	0/0:15,0:14:7.11:0,7,21	0/0:17,0:15:3.01:0,3,94	0/0:24,0:23:24.33:0,24,350	0/0:17,0:17:3.01:0,3,70	0/0:22,0:22:36.32:0,36,1218	0/0:6,0:5:3.01:0,3,119	0/0:16,0:15:6.02:0,6,126	0/0:12,0:12:8.94:0,9,219	0/0:12,0:11:1.25:0,1,3	0/0:19,0:20:21.07:0,21,889	0/0:15,0:14:0.47:0,0,1	0/1:11,0:11:9.65:71,0,10	0/1:9,0:9:2.14:44,0,2	0/0:13,0:11:0:0,0,0	1/1:12,7:19:6.02:205,6,0	1/1:26,0:24:1.88:8,2,0	0/0:10,0:9:3.01:0,3,123	0/0:18,0:18:0:0,0,0	0/0:13,0:12:5.94:0,6,120	0/0:9,0:9:0:0,0,0	0/0:18,0:18:30.08:0,30,900	0/0:19,0:19:18.06:0,18,674	./.
chr10	30757215	.	T	TAGATACAAGTAGAC	1414.44	PASS	AB=0.708;AC=24;AF=0.923;AN=26;BaseQRankSum=-3.152;DP=41;FS=25.056;HRun=0;HaplotypeScore=24.4830;InbreedingCoeff=-0.2502;MQ=162.80;MQ0=0;MQRankSum=-1.217;QD=40.41;ReadPosRankSum=-1.841;VQSLOD=0.3181;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/1:4,0:8:13.30:431,0,13	0/1:6,1:9:52.13:383,0,52	1/1:2,0:2:3.01:74,3,0	./.	./.	./.	./.	1/1:1,0:1:3.01:43,3,0	1/1:1,0:1:3:25,3,0	./.	1/1:1,0:1:3:25,3,0	1/1:1,0:1:3.01:74,3,0	./.	1/1:2,0:2:3.01:74,3,0	./.	./.	./.	1/1:1,0:1:2.97:20,3,0	1/1:3,0:3:9.01:136,9,0	1/1:3,0:3:3.01:75,3,0	./.	./.	./.	1/1:2,0:2:6:78,6,0	./.	1/1:1,0:1:3.01:62,3,0
chr10	30757701	.	ACG	A	137.72	PASS	AB=0.989;AC=23;AF=0.426;AN=54;BaseQRankSum=3.353;DP=421;FS=8.890;HRun=0;HaplotypeScore=86.9870;InbreedingCoeff=0.2410;MQ=33.55;MQ0=8;MQRankSum=0.622;QD=0.51;ReadPosRankSum=-1.100;VQSLOD=0.9073;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:19,0:18:0:0,0,0	1/1:7,0:7:0.47:1,0,0	0/1:5,0:2:22.84:23,0,26	0/0:7,0:2:2.96:0,3,19	0/1:13,0:13:0.13:0,0,0	1/1:11,0:11:0.81:2,1,0	0/0:18,0:18:0.30:0,0,1	0/0:9,0:9:12.51:0,13,95	0/1:22,0:21:0.03:0,0,0	0/1:19,0:19:45.52:46,0,49	0/1:17,0:17:0.01:0,0,0	1/1:28,0:28:2.08:9,2,0	0/0:16,0:16:1.38:0,1,4	1/1:25,0:25:2.53:19,3,0	0/0:15,0:15:9.03:0,9,167	./.	0/1:6,0:6:2.31:6,0,2	0/0:6,0:6:10.97:0,11,76	0/0:12,0:8:15.03:0,15,198	0/0:23,0:23:5.49:0,5,39	0/1:43,3:43:99:113,0,128	0/1:9,0:9:0.02:0,0,0	0/1:14,1:15:0:0,0,0	0/0:22,0:22:0.19:0,0,0	1/1:14,0:13:4.46:19,4,0	0/0:12,0:12:9.72:0,10,111	0/1:5,0:5:5.92:6,0,9	1/1:6,0:6:5.89:14,6,0
chr10	30757703	.	G	GCA	635.04	PASS	AB=0.937;AC=18;AF=0.321;AN=56;BaseQRankSum=-3.542;DP=458;FS=5.545;HRun=0;HaplotypeScore=93.9876;InbreedingCoeff=0.2278;MQ=34.47;MQ0=11;MQRankSum=-0.560;QD=2.82;ReadPosRankSum=-1.335;VQSLOD=1.5358;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:20,0:19:0:0,0,0	0/0:7,0:7:2.68:0,3,11	0/1:6,0:2:22.84:23,0,26	0/0:11,0:3:2.95:0,3,19	0/0:15,0:15:0:0,0,0	1/1:11,0:11:0.47:1,0,0	0/0:18,0:18:3.14:0,3,12	0/0:10,0:10:1.59:0,2,4	0/0:23,0:22:1.88:0,2,10	0/1:19,0:19:4.37:4,0,42	0/0:19,0:18:1.14:0,1,3	0/0:31,0:31:5.20:0,5,23	0/0:18,0:18:4.85:0,5,22	1/1:27,0:27:5.86:44,6,0	0/0:12,0:17:9.03:0,9,107	0/1:13,0:13:0:0,0,0	1/1:7,0:7:2.51:6,3,0	0/0:6,0:6:0.47:0,0,1	0/1:8,6:10:10.12:234,0,10	1/1:9,15:24:6.01:90,6,0	0/1:37,11:46:43.50:340,0,44	0/1:12,0:12:0.13:0,0,0	0/1:15,0:15:0.01:0,0,0	0/0:24,0:24:5.19:0,5,22	0/0:15,0:14:6.03:0,6,24	0/0:12,0:12:8.72:0,9,31	1/1:7,0:7:2.74:12,3,0	0/0:7,0:7:8.89:0,9,40
chr10	30757721	.	ACACG	A	1998.70	PASS	AB=0.979;AC=39;AF=0.696;AN=56;BaseQRankSum=1.385;DP=646;FS=10.351;HRun=0;HaplotypeScore=154.4974;InbreedingCoeff=0.6568;MQ=40.62;MQ0=22;MQRankSum=-1.433;QD=4.57;ReadPosRankSum=-3.366;VQSLOD=1.1858;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:28,1:28:14.51:96,15,0	0/0:6,0:6:0:0,0,0	0/0:29,0:6:8.20:0,8,151	0/0:38,0:14:19.80:0,20,227	0/1:19,0:18:0.18:0,0,0	1/1:13,1:14:4.24:28,4,0	1/1:26,0:25:13.98:95,14,0	1/1:13,1:13:7.74:192,8,0	1/1:27,1:27:10.10:119,10,0	1/1:33,1:34:36.57:429,37,0	1/1:21,1:20:4.06:20,4,0	1/1:35,3:38:16.85:149,17,0	1/1:22,2:24:3.98:62,4,0	1/1:30,3:33:20.38:159,20,0	0/0:24,0:24:31.64:0,32,393	0/1:14,1:15:0:0,0,0	1/1:9,0:9:11.88:91,12,0	0/1:8,0:8:0.10:88,0,0	0/0:19,0:11:26.97:0,27,380	0/0:26,0:26:20.70:0,21,241	0/0:67,0:63:91.03:0,91,1189	1/1:15,2:17:2.38:19,2,0	1/1:15,1:16:5.96:50,6,0	1/1:32,0:32:19.54:150,20,0	1/1:24,0:23:18.74:168,19,0	1/1:17,1:18:28.12:231,28,0	1/1:8,0:8:2.04:6,2,0	1/1:9,0:9:2.11:17,2,0
chr10	30757723	.	ACG	A	4224.52	PASS	AB=0.688;AC=41;AF=0.732;AN=56;BaseQRankSum=2.748;DP=662;FS=1.103;HRun=0;HaplotypeScore=143.5807;InbreedingCoeff=0.7347;MQ=40.70;MQ0=22;MQRankSum=-2.583;QD=9.39;ReadPosRankSum=-0.144;VQSLOD=4.6869;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:25,4:28:14.87:109,15,0	1/1:2,4:6:3.01:46,3,0	0/0:29,0:7:8.17:0,8,158	0/0:43,0:16:21.51:0,22,212	0/1:2,17:18:0.13:0,0,0	1/1:11,3:14:5.93:70,6,0	1/1:21,3:23:27.24:233,27,0	1/1:3,13:15:38.92:335,39,0	1/1:20,9:28:23.50:185,23,0	1/1:27,9:36:90:899,90,0	1/1:16,6:20:5.92:61,6,0	1/1:26,12:38:29.50:272,30,0	1/1:4,20:24:14.61:140,15,0	1/1:23,11:34:32.73:291,33,0	0/0:24,0:24:32.66:0,33,345	0/1:2,13:15:0:0,0,0	1/1:9,0:9:11.90:97,12,0	0/1:8,0:8:0.32:88,0,0	0/0:21,0:13:12.96:0,13,268	0/0:26,0:26:23.67:0,24,213	0/0:68,0:64:75.16:0,75,829	1/1:3,14:17:5.97:65,6,0	1/1:9,7:16:5.99:50,6,0	1/1:23,10:33:38.29:397,38,0	1/1:17,7:23:30.27:289,30,0	1/1:2,15:17:35.86:335,36,0	1/1:0,8:8:3.01:45,3,0	1/1:1,11:12:15.05:218,15,0
chr10	30757736	.	CAT	C	32.38	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=5.144;DP=751;FS=2.952;HRun=0;HaplotypeScore=187.3703;InbreedingCoeff=0.3214;MQ=44.25;MQ0=20;MQRankSum=-4.168;QD=0.40;ReadPosRankSum=2.935;VQSLOD=2.8780;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:20.70:0,21,148	0/0:9,0:9:13.20:0,13,98	0/0:42,0:8:19.88:0,20,340	0/0:60,0:19:35.16:0,35,707	0/1:19,0:18:0.13:0,0,0	0/0:15,0:15:6.87:0,7,52	0/0:28,0:27:42.16:0,42,336	0/0:24,0:23:34.98:0,35,481	0/0:27,0:26:15.49:0,15,117	0/1:40,0:40:81.37:81,0,495	0/0:15,1:14:8.17:0,8,75	0/0:39,0:39:20.52:0,21,174	0/0:28,1:29:19.50:0,20,113	0/0:33,0:33:30.42:0,30,205	0/0:24,0:24:35.91:0,36,600	0/0:12,0:12:3:0,3,25	0/0:15,0:15:30.88:0,31,229	0/0:12,0:12:26.84:0,27,232	0/0:18,0:14:41.97:0,42,714	0/0:26,0:26:35.89:0,36,617	0/0:80,0:75:99:0,135,2307	0/0:20,1:21:16.02:0,16,122	0/0:16,1:17:17.85:0,18,149	0/0:41,0:41:40.64:0,41,380	0/0:33,0:31:19.45:0,19,230	0/0:20,0:18:6.43:0,6,241	0/1:10,0:10:6.12:6,0,83	1/1:11,0:11:4.71:42,5,0
chr10	30757898	.	CACACACACGCACACACACCG	C	784.77	PASS	AB=0.909;AC=3;AF=0.054;AN=56;BaseQRankSum=6.507;DP=898;FS=1.916;HRun=0;HaplotypeScore=439.9234;InbreedingCoeff=0.6135;MQ=52.44;MQ0=19;MQRankSum=-5.163;QD=31.39;ReadPosRankSum=-1.103;VQSLOD=0.7553;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:93.26:0,93,4594	0/0:11,0:11:20.87:0,21,1113	0/0:39,0:7:14.40:0,14,481	0/0:42,0:8:9.83:0,10,394	0/0:16,0:16:36.12:0,36,1735	0/0:31,0:30:72.06:0,72,3608	0/0:32,0:31:78.10:0,78,4413	0/0:42,0:42:99:0,126,4386	0/0:34,0:33:80.86:0,81,3892	0/0:26,0:25:75.01:0,75,3190	0/0:16,0:16:36.11:0,36,2001	0/0:46,0:46:99:0,111,5363	0/0:55,0:55:99:0,138,6323	0/0:50,0:50:99:0,120,5701	0/0:33,0:33:86.99:0,87,4298	0/0:28,0:28:69.02:0,69,3181	1/1:11,4:15:35.67:660,36,0	0/1:9,1:10:99:231,0,114	0/0:18,0:17:51.07:0,51,1499	0/0:17,0:17:51.13:0,51,2310	0/0:142,0:141:99:0,403,24144	0/0:16,0:16:39:0,39,1884	0/0:15,0:15:26.70:0,27,1312	0/0:54,0:54:99:0,117,5726	0/0:18,0:18:48.12:0,48,2519	0/0:30,0:30:90.22:0,90,5407	0/0:16,0:16:42.07:0,42,1783	0/0:7,0:7:21.07:0,21,1035
chr10	30757948	.	TGCACACACAG	T	14960.85	PASS	AB=0.736;AC=43;AF=0.768;AN=56;BaseQRankSum=13.980;DP=817;FS=23.504;HRun=0;HaplotypeScore=239.3198;InbreedingCoeff=0.6308;MQ=59.57;MQ0=11;MQRankSum=-12.196;QD=26.43;ReadPosRankSum=-1.445;VQSLOD=2.8006;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:10,29:39:39.13:869,39,0	1/1:0,8:8:6.02:184,6,0	0/0:53,0:21:23.88:0,24,400	0/1:61,0:28:24.98:25,0,404	1/1:2,8:10:14.98:184,15,0	1/1:5,9:13:12.04:362,12,0	1/1:13,27:39:29.90:778,30,0	1/1:18,12:30:32.97:483,33,0	1/1:7,20:27:36.12:1065,36,0	1/1:5,17:22:44.64:1125,45,0	1/1:5,6:11:24.08:513,24,0	1/1:8,30:38:42.61:1229,43,0	1/1:9,28:37:33.01:996,33,0	1/1:9,33:42:69.02:1829,69,0	0/0:28,0:28:75.24:0,75,3056	1/1:5,23:27:41.97:1232,42,0	1/1:17,3:20:33.11:624,33,0	0/1:6,9:15:67.35:268,0,67	0/0:19,0:17:33.10:0,33,1077	0/0:17,0:17:39.13:0,39,1682	0/0:134,0:134:99:0,283,11491	1/1:2,12:14:27.09:458,27,0	1/1:2,16:18:18.06:349,18,0	0/1:11,22:33:23.19:388,0,23	1/1:4,5:9:6.02:184,6,0	1/1:13,18:31:48.12:1112,48,0	1/1:2,14:16:23.57:645,24,0	1/1:1,0:1:3.01:57,3,0
chr10	30762053	.	A	AACACACAC	11582.79	PASS	AB=1.000;AC=50;AF=0.893;AN=56;BaseQRankSum=6.882;DP=804;FS=15.677;HRun=0;HaplotypeScore=317.3698;InbreedingCoeff=0.4811;MQ=54.19;MQ0=40;MQRankSum=-6.496;QD=16.11;ReadPosRankSum=-0.965;VQSLOD=1.9981;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:38,0:32:8.52:81,9,0	1/1:17,0:17:9.50:229,10,0	0/0:43,0:18:9.39:0,9,301	0/1:42,0:28:7.90:8,0,217	1/1:14,0:11:2.97:99,3,0	1/1:28,0:26:14.67:237,15,0	1/1:24,0:21:9.50:126,9,0	1/1:24,0:21:38.89:603,39,0	1/1:26,0:24:21.04:462,21,0	1/1:42,0:34:57.93:861,58,0	1/1:23,0:19:9.02:115,9,0	1/1:40,0:29:21.04:453,21,0	1/1:22,0:21:26.78:468,27,0	1/1:39,0:32:15.66:322,16,0	0/0:38,0:41:75.71:0,76,1710	1/1:45,0:43:48.13:1122,48,0	1/1:16,3:19:33.11:1014,33,0	1/1:11,1:12:18.06:549,18,0	1/1:20,1:17:18.06:517,18,0	1/1:11,9:19:21.03:728,21,0	1/1:39,2:42:17.76:414,18,0	1/1:30,0:27:14.81:279,15,0	1/1:17,0:11:3.01:102,3,0	1/1:34,0:31:9.50:132,9,0	0/1:24,0:18:27.64:28,0,42	1/1:34,0:32:61.82:1485,62,0	1/1:27,0:21:30.10:786,30,0	1/1:12,0:11:23.43:365,23,0
chr10	30762186	.	A	AACAC	41868.10	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-1.132;DP=1009;FS=21.804;HRun=0;HaplotypeScore=192.0950;InbreedingCoeff=0.9996;MQ=54.56;MQ0=5;MQRankSum=-4.682;QD=47.96;ReadPosRankSum=4.667;VQSLOD=3.5095;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,30:37:51.13:1162,51,0	1/1:1,15:17:39.13:1008,39,0	0/0:46,0:33:31.52:0,32,1031	0/0:41,0:37:72.38:0,72,1134	1/1:5,21:26:60.08:1386,60,0	1/1:6,21:27:57.19:1265,57,0	1/1:4,29:35:75.25:1743,75,0	1/1:10,31:42:96.24:2008,96,0	1/1:13,11:23:36.12:812,36,0	1/1:5,38:49:99:2961,129,0	1/1:4,26:31:63.22:1594,63,0	1/1:5,38:44:90.30:2048,90,0	1/1:6,30:36:72.24:1659,72,0	1/1:4,38:43:99:2081,99,0	0/0:48,0:48:99:0,132,2144	1/1:5,33:41:75.26:1865,75,0	1/1:3,30:35:54.18:1319,54,0	1/1:2,14:16:38.26:971,38,0	1/1:5,13:17:39.06:755,39,0	1/1:1,21:22:57.19:1399,57,0	1/1:10,77:91:99:3369,141,0	1/1:2,26:30:60.67:1390,61,0	1/1:2,22:26:60.20:1475,60,0	1/1:5,43:49:84.18:1973,84,0	1/1:4,36:40:92.53:2302,93,0	1/1:5,43:50:99:3234,135,0	1/1:3,24:27:54.18:1317,54,0	1/1:1,13:14:30.10:773,30,0
chr10	30762214	.	TACATACAC	T	423.05	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.901;DP=990;FS=21.205;HRun=0;HaplotypeScore=351.9057;InbreedingCoeff=0.9919;MQ=54.84;MQ0=8;MQRankSum=-4.154;QD=21.15;ReadPosRankSum=-0.058;VQSLOD=1.1749;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:48.11:0,48,1350	0/0:17,0:17:48.14:0,48,1745	0/0:44,0:25:70.80:0,71,1819	0/0:40,0:34:75.60:0,76,1818	0/0:30,0:30:84.29:0,84,2966	0/0:26,0:26:54.14:0,54,1511	0/0:28,0:28:54.16:0,54,1468	0/0:58,0:57:99:0,144,3677	1/1:3,17:19:18.06:514,18,0	0/0:54,0:54:99:0,157,5116	0/0:29,0:29:81.28:0,81,3097	0/0:42,0:42:87.28:0,87,2817	0/0:24,0:24:53.72:0,54,1395	0/0:35,0:35:69.24:0,69,2311	0/0:47,0:47:99:0,132,4864	0/0:46,0:46:69.22:0,69,2253	0/0:34,0:34:58.38:0,58,1843	0/0:16,0:16:39:0,39,1033	0/0:23,0:21:63.19:0,63,1661	0/0:27,0:27:75.22:0,75,2508	0/0:82,0:82:99:0,162,5503	0/0:39,0:39:99:0,100,3244	0/0:27,0:27:72.25:0,72,2345	0/0:44,0:42:70.43:0,70,2050	0/0:42,0:42:99:0,108,3840	0/0:42,0:42:99:0,123,4471	0/0:26,0:26:63.17:0,63,2214	0/0:15,0:15:45.12:0,45,1517
chr10	30762347	.	TACACACACACACACACACACACACACACACACAC	T	13005.45	PASS	AB=0.824;AC=39;AF=0.696;AN=56;BaseQRankSum=3.799;DP=698;FS=1.473;HRun=0;HaplotypeScore=480.6080;InbreedingCoeff=0.2509;MQ=45.87;MQ0=15;MQRankSum=0.587;QD=22.58;ReadPosRankSum=1.678;VQSLOD=1.7467;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:29,2:29:41.97:581,0,42	1/1:6,5:11:6.49:497,6,0	0/0:27,0:17:12.04:0,12,452	0/0:41,0:23:21:0,21,918	1/1:10,11:21:5.78:58,6,0	1/1:12,16:27:3.01:244,3,0	0/1:20,0:19:23.91:183,0,24	0/1:21,13:32:99:684,0,189	1/1:16,0:26:9.03:648,9,0	1/1:20,3:23:9.02:546,9,0	1/1:8,1:9:3.90:204,4,0	1/1:14,3:17:12.04:779,12,0	1/1:22,16:38:9.03:666,9,0	1/1:16,21:37:18.06:1374,18,0	0/0:27,0:27:45.08:0,45,3617	1/1:18,13:30:15.05:1205,15,0	1/1:24,0:24:3.01:237,3,0	0/1:9,0:21:76.59:215,0,77	0/0:17,0:15:18.06:0,18,235	0/1:20,0:30:80.90:414,0,81	0/1:53,0:51:0.55:312,0,1	1/1:14,2:15:6.02:479,6,0	1/1:13,1:14:6.02:292,6,0	1/1:22,2:24:16.41:474,16,0	0/1:11,7:18:99:717,0,379	1/1:17,14:31:39.09:1464,39,0	1/1:12,7:19:9.03:735,9,0	0/0:9,0:7:3.01:0,3,65
chr10	30762364	.	A	ATG	789.11	PASS	AB=0.980;AC=23;AF=0.411;AN=56;BaseQRankSum=6.676;DP=493;FS=1.249;HRun=0;HaplotypeScore=249.4327;InbreedingCoeff=-0.4119;MQ=41.10;MQ0=21;MQRankSum=-3.552;QD=2.19;ReadPosRankSum=5.528;VQSLOD=2.1647;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:24:21.89:22,0,210	0/1:7,0:7:18.59:48,0,19	0/0:12,0:4:12.04:0,12,184	0/0:28,0:9:12.07:0,12,264	0/0:16,0:17:11.80:0,12,79	0/1:23,0:21:15.23:15,0,47	0/1:14,2:14:9.83:10,0,126	0/0:30,0:27:51.75:0,52,429	1/1:10,0:10:8.76:78,9,0	0/1:12,0:12:38.23:38,0,127	0/0:5,0:5:4.59:0,5,15	0/1:14,0:14:57.56:58,0,137	0/1:28,0:28:13.36:13,0,208	0/1:31,0:31:99:116,0,102	0/0:30,0:29:71:0,71,1086	0/1:23,0:22:96.63:119,0,97	1/1:0,2:2:5.99:57,6,0	0/1:15,0:14:5.22:29,0,5	0/0:10,0:8:18.53:0,19,236	0/1:21,0:20:7.94:8,0,112	0/1:34,3:41:35.94:36,0,122	0/1:9,0:7:36.60:37,0,51	0/1:8,0:8:12.48:12,0,53	0/1:18,2:20:47.09:47,0,58	0/1:13,0:13:63.77:64,0,110	0/1:24,0:24:56.32:56,0,179	0/1:11,0:11:46.97:64,0,47	0/1:4,0:2:24.98:25,0,32
chr10	30762366	.	A	AT	1536.57	PASS	AB=0.931;AC=38;AF=0.704;AN=54;BaseQRankSum=7.148;DP=356;FS=0.000;HRun=0;HaplotypeScore=136.6066;InbreedingCoeff=0.1792;MQ=41.37;MQ0=21;MQRankSum=-4.055;QD=5.98;ReadPosRankSum=4.770;VQSLOD=3.4943;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,2:8:11:140,11,0	1/1:5,0:5:6.02:84,6,0	0/0:12,0:5:15.05:0,15,198	0/0:25,0:8:20.55:0,21,252	./.	1/1:18,0:16:3.01:42,3,0	0/1:11,0:10:31.24:31,0,35	0/1:19,0:16:0.44:0,0,75	1/1:10,0:10:8.83:62,9,0	0/1:4,2:6:2.52:76,0,3	1/1:2,0:2:2.94:18,3,0	1/1:5,1:6:2.76:123,3,0	1/1:16,0:16:8.98:104,9,0	1/1:21,0:21:17.88:199,18,0	0/0:30,0:29:71.70:0,72,994	1/1:14,0:13:15.04:173,15,0	1/1:3,0:3:5.98:47,6,0	0/1:15,0:14:15.04:15,0,29	0/1:10,0:8:4.35:4,0,203	0/0:20,0:19:2.97:0,3,85	0/1:34,1:33:23.08:23,0,63	1/1:5,0:3:6.02:84,6,0	1/1:2,0:2:3.48:42,3,0	1/1:7,2:11:8.61:95,9,0	0/1:10,0:9:67.59:110,0,68	1/1:15,0:15:3.60:102,4,0	1/1:7,0:7:7.27:87,7,0	0/1:3,1:2:34.86:35,0,35
chr10	30762368	.	A	AT	1090.91	PASS	AB=0.954;AC=37;AF=0.685;AN=54;BaseQRankSum=7.374;DP=338;FS=8.239;HRun=0;HaplotypeScore=136.2262;InbreedingCoeff=0.0921;MQ=41.76;MQ0=20;MQRankSum=-4.370;QD=4.58;ReadPosRankSum=5.762;VQSLOD=2.7288;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,0:7:4.61:59,5,0	1/1:5,0:5:5.97:45,6,0	0/0:14,0:6:18.06:0,18,244	0/0:25,0:9:24.08:0,24,324	./.	1/1:18,0:16:2.98:22,3,0	0/1:9,2:9:18.55:19,0,49	0/0:18,0:15:5.25:0,5,63	1/1:10,0:10:9.03:114,9,0	0/1:6,0:6:1.64:28,0,2	1/1:1,1:2:2.92:17,3,0	0/1:6,0:6:5.55:60,0,6	1/1:16,0:16:8.93:64,9,0	1/1:21,0:21:17.77:130,18,0	0/0:31,0:30:71.70:0,72,989	1/1:14,0:13:14.92:118,15,0	1/1:1,2:3:6.02:85,6,0	0/1:15,0:14:33.06:36,0,33	0/1:4,1:4:9.79:40,0,10	0/1:12,0:11:25.25:25,0,35	0/1:27,3:28:65.43:65,0,85	1/1:4,1:3:8.92:62,9,0	1/1:2,0:2:4.21:23,4,0	1/1:9,2:11:5.37:49,5,0	0/1:10,0:9:49.40:49,0,68	1/1:14,1:15:4.64:82,5,0	1/1:7,0:7:7.21:47,7,0	0/1:4,0:2:15.68:16,0,26
chr10	30762378	.	A	ATG	2545.13	PASS	AB=0.973;AC=41;AF=0.732;AN=56;BaseQRankSum=7.705;DP=388;FS=3.314;HRun=0;HaplotypeScore=145.1682;InbreedingCoeff=0.3525;MQ=41.97;MQ0=23;MQRankSum=-5.705;QD=8.60;ReadPosRankSum=3.805;VQSLOD=3.2019;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:15:8.39:139,8,0	1/1:5,0:5:6.02:72,6,0	0/0:16,0:8:21.07:0,21,310	0/0:24,0:14:36.09:0,36,516	0/1:13,0:12:0:0,0,0	1/1:18,0:16:3.01:36,3,0	0/1:11,2:11:22.26:65,0,22	0/1:18,0:15:54.01:224,0,54	0/0:10,0:10:1.72:0,2,5	1/1:15,0:14:32.05:352,32,0	1/1:7,0:7:4:52,4,0	1/1:13,0:13:24.57:264,25,0	1/1:16,0:16:5.34:71,5,0	1/1:21,0:21:15.05:182,15,0	0/0:28,0:27:64.89:0,65,969	1/1:14,0:13:15.05:185,15,0	1/1:8,0:8:5.24:18,5,0	0/0:14,0:13:0.58:0,1,24	0/1:6,0:5:5.46:5,0,17	1/1:11,0:10:6.19:30,6,0	1/1:30,3:30:18.52:243,19,0	1/1:10,0:8:6.02:70,6,0	1/1:5,0:5:3.01:34,3,0	1/1:11,2:14:12.74:135,13,0	0/1:11,0:10:60:93,0,60	1/1:15,0:15:25.91:268,26,0	1/1:7,0:7:9.02:96,9,0	1/1:6,0:4:2.91:71,3,0
chr10	30763414	.	C	CAT	1302.70	PASS	AB=0.984;AC=33;AF=0.589;AN=56;BaseQRankSum=13.649;DP=585;FS=28.518;HRun=0;HaplotypeScore=175.2563;InbreedingCoeff=0.4239;MQ=48.78;MQ0=33;MQRankSum=5.877;QD=3.30;ReadPosRankSum=2.972;VQSLOD=1.4077;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:18:14.84:40,15,0	1/1:5,0:5:3.11:8,3,0	0/0:17,0:7:17.09:0,17,215	0/1:21,0:4:6.97:7,0,101	0/1:30,1:31:13.12:135,0,13	1/1:15,0:15:16.92:76,17,0	0/1:11,0:10:38.36:38,0,114	0/1:64,0:53:99:219,0,1156	0/0:21,0:21:29.94:0,30,429	1/1:25,0:24:24.57:205,25,0	1/1:24,1:25:13.86:80,14,0	1/1:17,0:16:17.25:63,17,0	1/1:15,0:15:12.03:50,12,0	1/1:20,2:22:23.22:117,23,0	0/0:30,0:30:2.55:0,3,798	1/1:19,0:15:14.26:37,14,0	0/0:36,0:36:70:0,70,1061	0/0:35,0:34:67:0,67,981	0/0:18,0:13:33.07:0,33,444	0/0:22,0:20:54.18:0,54,773	0/0:11,0:10:21.07:0,21,301	1/1:7,2:9:6.48:18,6,0	1/1:11,2:13:12.32:48,12,0	1/1:10,0:10:7.77:20,8,0	1/1:18,2:20:21.65:120,22,0	0/1:25,0:24:24.23:68,0,24	0/1:18,0:18:15.83:114,0,16	0/1:10,1:10:7.09:37,0,7
chr10	30763512	.	TA	T	19068.13	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=3.286;DP=591;FS=2.715;HRun=1;HaplotypeScore=110.7801;InbreedingCoeff=0.9821;MQ=76.31;MQ0=0;MQRankSum=-6.425;QD=35.12;ReadPosRankSum=2.626;VQSLOD=4.7517;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,43:43:99:1424,105,0	1/1:0,10:10:27.09:377,27,0	0/0:16,0:16:24.32:0,24,562	0/0:13,0:13:35.97:0,36,439	1/1:1,20:21:56.87:700,57,0	1/1:1,24:25:60.11:807,60,0	1/1:0,27:27:57.15:767,57,0	1/1:0,34:34:99:1265,102,0	1/1:1,19:20:10.28:662,10,0	1/1:0,28:28:84.22:1083,84,0	1/1:0,14:14:38.98:498,39,0	1/1:0,23:23:51.13:711,51,0	1/1:0,11:11:29.68:418,30,0	1/1:0,25:25:60.20:832,60,0	0/0:19,0:19:57.15:0,57,777	1/1:0,20:20:54.18:742,54,0	1/1:0,17:17:39.13:544,39,0	1/1:0,27:27:63.21:878,63,0	1/1:0,12:12:36.09:468,36,0	1/1:0,30:30:82.03:1024,82,0	1/1:0,19:19:57.19:795,57,0	1/1:0,17:17:42.11:585,42,0	1/1:0,9:9:24.08:335,24,0	1/1:0,23:23:54.14:718,54,0	1/1:0,24:24:66.22:921,66,0	1/1:0,32:32:96.23:1243,96,0	1/1:0,16:16:45.15:627,45,0	1/1:0,16:16:48.13:643,48,0
chr10	30763616	.	C	CCCTCCT	12000.27	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-8.220;DP=604;FS=1.039;HRun=0;HaplotypeScore=114.4405;InbreedingCoeff=0.9175;MQ=62.12;MQ0=14;MQRankSum=-9.372;QD=29.13;ReadPosRankSum=-0.227;VQSLOD=4.2652;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,24:40:33.11:1014,33,0	1/1:7,6:15:17.80:505,18,0	0/0:20,0:12:6.93:0,7,103	0/0:19,0:15:12.04:0,12,132	1/1:3,8:12:15.05:444,15,0	1/1:8,17:26:18.06:593,18,0	1/1:8,26:36:36.12:1181,36,0	1/1:28,8:38:24.47:433,24,0	0/0:19,0:17:33.03:0,33,541	1/1:8,9:17:20.90:397,21,0	1/1:4,8:15:18.06:591,18,0	1/1:3,15:19:21.07:691,21,0	1/1:14,6:19:35.83:994,36,0	1/1:6,16:23:36.12:1186,36,0	0/0:26,0:26:50.93:0,51,888	1/1:10,20:31:29.95:976,30,0	0/0:22,0:21:51.11:0,51,954	0/0:20,0:20:41.83:0,42,711	0/0:22,0:17:17.59:0,18,305	0/0:11,0:11:21.04:0,21,317	0/0:32,0:32:62.88:0,63,1037	1/1:6,7:15:3.01:99,3,0	1/1:4,7:12:9.03:296,9,0	1/1:10,13:22:12.04:395,12,0	1/1:4,14:19:21.07:643,21,0	1/1:11,14:26:39.11:956,39,0	1/1:6,7:14:9.58:298,10,0	1/1:1,6:8:11.97:309,12,0
chr10	30766184	.	CT	C	8170.03	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-2.162;DP=406;FS=10.056;HRun=9;HaplotypeScore=46.7754;InbreedingCoeff=0.9087;MQ=79.36;MQ0=0;MQRankSum=-3.349;QD=22.89;ReadPosRankSum=3.712;VQSLOD=5.1041;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,23:25:54.03:494,54,0	1/1:0,3:3:9:82,9,0	0/0:19,0:13:23.75:0,24,184	0/0:19,0:16:24.76:0,25,189	1/1:2,18:20:51.02:467,51,0	1/1:0,20:20:57.03:522,57,0	1/1:2,12:14:33.02:302,33,0	1/1:7,19:26:56.95:507,57,0	1/1:2,8:10:24.01:220,24,0	1/1:1,17:18:51.03:467,51,0	1/1:6,14:20:41.97:376,42,0	1/1:1,7:8:21.01:192,21,0	1/1:0,5:5:15.01:137,15,0	1/1:1,10:11:30.01:274,30,0	0/0:10,0:10:27.03:0,27,296	1/1:1,9:10:27.01:247,27,0	1/1:0,18:18:51.03:466,51,0	1/1:2,19:21:54.03:494,54,0	1/1:4,17:21:50.96:451,51,0	1/1:3,13:16:39.02:357,39,0	1/1:0,6:6:15.01:137,15,0	1/1:0,3:3:6:54,6,0	1/1:0,7:7:12.01:110,12,0	1/1:0,4:4:12.01:110,12,0	1/1:4,20:24:60.03:549,60,0	1/1:1,14:15:42.02:384,42,0	1/1:1,22:23:63.03:576,63,0	1/1:0,9:9:21.01:193,21,0
chr10	30766531	.	C	CA	1982.49	PASS	AB=0.676;AC=25;AF=0.446;AN=56;BaseQRankSum=-5.502;DP=561;FS=4.734;HRun=15;HaplotypeScore=72.2664;InbreedingCoeff=-0.0539;MQ=69.20;MQ0=3;MQRankSum=-0.728;QD=4.94;ReadPosRankSum=-3.504;VQSLOD=1.3415;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:14,23:39:41.94:208,0,42	0/1:7,0:7:15.45:15,0,26	0/0:24,1:13:4.70:0,5,41	0/0:25,0:15:4.78:0,5,25	0/1:14,15:30:9.46:240,0,9	0/1:6,10:16:0.10:96,0,0	0/1:11,11:22:26.24:124,0,26	1/1:24,7:31:35.57:262,36,0	0/1:7,1:19:9.19:20,0,9	0/1:19,16:35:14.28:200,0,14	0/1:11,13:23:24.23:126,0,24	1/1:6,8:14:7.20:47,7,0	1/1:5,9:14:5.84:39,6,0	0/1:8,6:14:6.43:40,0,6	0/0:16,1:20:1.07:0,1,118	1/1:3,13:16:10.16:70,10,0	0/0:9,0:24:36.37:0,36,124	0/0:8,0:22:31.34:0,31,100	0/0:7,0:14:14.80:0,15,50	0/0:5,0:16:16.07:0,16,47	0/0:6,0:13:9.93:0,10,28	0/1:12,8:21:56.26:113,0,56	0/1:2,7:9:24.04:39,0,24	0/1:9,10:20:9.86:62,0,10	0/1:4,12:15:0.07:102,0,0	1/1:9,16:25:34.18:276,34,0	0/1:10,6:16:15.38:18,0,15	0/1:7,5:13:6.18:53,0,6
chr10	30767010	.	CCA	C	5998.67	PASS	AB=0.984;AC=48;AF=0.857;AN=56;BaseQRankSum=3.932;DP=445;FS=62.185;HRun=0;HaplotypeScore=108.2098;InbreedingCoeff=0.6111;MQ=73.71;MQ0=2;MQRankSum=-2.193;QD=16.48;ReadPosRankSum=1.860;VQSLOD=2.4058;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,15:20:17.80:199,18,0	1/1:1,0:1:3.01:37,3,0	0/0:30,0:24:0.20:0,0,210	0/0:34,0:26:20.67:0,21,336	1/1:6,14:20:17.96:204,18,0	1/1:1,3:4:11.83:108,12,0	1/1:4,7:11:30:306,30,0	1/1:13,3:15:18.02:184,18,0	0/0:17,0:17:14.39:0,14,533	1/1:6,9:14:36.09:417,36,0	1/1:0,9:9:18.94:225,19,0	1/1:3,9:12:21.07:260,21,0	1/1:4,16:22:38.95:459,39,0	1/1:1,12:13:30.05:347,30,0	0/1:29,1:30:5.91:6,0,762	1/1:1,17:18:36.11:446,36,0	1/1:13,6:19:26.85:222,27,0	1/1:1,9:10:29.95:304,30,0	1/1:5,9:14:20.76:167,21,0	1/1:4,6:10:21.04:246,21,0	1/1:5,19:23:12.51:150,13,0	1/1:3,12:15:15.08:185,15,0	1/1:1,10:11:10.83:146,11,0	1/1:7,19:26:23.82:297,24,0	1/1:2,5:7:9.03:112,9,0	1/1:2,11:13:27.07:323,27,0	1/1:6,12:18:51.11:591,51,0	0/1:6,0:6:1.43:60,0,1
chr10	30767025	.	CAG	C	1589.66	PASS	AB=0.987;AC=36;AF=0.643;AN=56;BaseQRankSum=-0.684;DP=478;FS=19.987;HRun=0;HaplotypeScore=167.9003;InbreedingCoeff=0.0349;MQ=51.96;MQ0=5;MQRankSum=1.929;QD=3.74;ReadPosRankSum=7.039;VQSLOD=0.9783;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:19:11.61:67,12,0	1/1:3,0:3:6.78:39,7,0	0/0:18,0:12:2.80:0,3,7	0/1:23,0:16:1.01:1,0,54	1/1:21,0:21:13.41:65,13,0	0/1:8,0:8:1.36:17,0,1	1/1:12,0:12:14.54:62,15,0	0/1:12,0:11:4.78:5,0,35	0/0:15,0:15:35.97:0,36,405	0/1:21,0:19:93.78:94,0,105	1/1:16,0:16:19.60:89,20,0	0/1:20,0:20:21.28:100,0,21	0/1:23,1:24:11.38:167,0,11	1/1:19,0:19:9.03:119,9,0	0/1:25,4:29:52.46:52,0,759	0/1:22,0:22:6.76:145,0,7	0/1:22,0:21:12.94:13,0,15	1/1:10,0:10:20.23:111,20,0	0/0:15,0:14:11.10:0,11,115	1/1:11,0:10:2.67:81,3,0	0/1:27,0:25:7.52:40,0,8	1/1:15,0:15:5:73,5,0	1/1:14,0:13:9.66:46,10,0	1/1:23,0:23:22.17:102,22,0	1/1:7,0:7:8.23:37,8,0	0/1:18,0:17:27.72:81,0,28	0/1:27,0:27:85.13:150,0,85	0/0:5,0:5:1.71:0,2,35
chr10	30767061	.	CAG	C	3118.39	PASS	AB=0.891;AC=41;AF=0.732;AN=56;BaseQRankSum=2.468;DP=437;FS=64.302;HRun=0;HaplotypeScore=134.5197;InbreedingCoeff=0.0850;MQ=43.48;MQ0=15;MQRankSum=-3.246;QD=9.74;ReadPosRankSum=0.565;VQSLOD=1.1299;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,2:11:8.34:66,8,0	1/1:3,0:3:2.88:18,3,0	0/1:57,0:11:15.06:15,0,259	0/0:79,0:15:9.74:0,10,445	0/1:11,1:13:0.35:0,0,1	1/1:3,4:7:14.97:162,15,0	1/1:5,5:10:15.86:180,16,0	0/1:9,8:15:33.69:306,0,34	0/1:9,0:9:53.80:54,0,81	0/1:12,8:19:18.69:345,0,19	1/1:10,2:12:17.84:141,18,0	1/1:14,4:18:28.67:349,29,0	1/1:14,4:18:46.73:376,47,0	0/1:13,3:16:1.26:183,0,1	0/0:24,0:24:69.12:0,69,1038	1/1:11,3:14:5.95:201,6,0	0/0:8,6:14:9.50:0,10,156	1/1:4,5:9:2.42:35,2,0	0/1:5,0:5:32.13:40,0,32	0/1:7,0:6:18.29:48,0,18	1/1:10,1:10:2.12:4,2,0	1/1:7,2:9:5.54:103,6,0	1/1:5,2:6:1.69:37,2,0	1/1:10,2:12:11.87:113,12,0	1/1:2,1:3:3.01:40,3,0	0/1:10,2:11:26.84:161,0,27	1/1:10,6:16:3.76:259,4,0	1/1:0,0:1:3.01:39,3,0
chr10	30767065	.	G	GAGACAA	7486.06	PASS	AB=0.978;AC=47;AF=0.839;AN=56;BaseQRankSum=5.735;DP=458;FS=121.114;HRun=0;HaplotypeScore=141.4392;InbreedingCoeff=0.2365;MQ=45.36;MQ0=18;MQRankSum=-4.368;QD=21.95;ReadPosRankSum=-0.688;VQSLOD=0.6019;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,2:11:17.97:154,18,0	1/1:3,0:3:8.24:102,8,0	0/1:70,0:12:16.57:17,0,362	0/0:89,0:20:24.85:0,25,630	1/1:11,0:11:6.29:19,6,0	1/1:6,1:7:15:174,15,0	1/1:10,0:10:24.19:213,24,0	0/1:18,0:16:99:467,0,126	0/1:7,1:8:73.58:133,0,74	1/1:19,1:19:56.73:1020,57,0	1/1:10,3:12:21.96:194,22,0	1/1:15,3:18:27.35:678,27,0	1/1:16,1:18:48.08:711,48,0	1/1:12,3:15:38.26:534,38,0	0/0:26,0:26:72.01:0,72,1435	1/1:11,1:12:33.46:401,33,0	0/1:14,0:14:41.50:41,0,173	1/1:9,0:9:2.92:17,3,0	1/1:2,4:6:15.05:439,15,0	0/1:7,0:6:7.16:87,0,7	1/1:9,1:8:2.18:12,2,0	1/1:8,1:9:24.33:255,24,0	1/1:5,2:6:8.28:38,8,0	1/1:11,1:12:13.22:181,13,0	1/1:2,1:3:5.02:28,5,0	1/1:10,2:11:30.05:587,30,0	1/1:12,3:15:45.15:890,45,0	1/1:1,0:1:3.01:93,3,0
chr10	30767086	.	G	GACA	152.35	PASS	AB=0.783;AC=12;AF=0.231;AN=52;BaseQRankSum=4.611;DP=416;FS=4.516;HRun=0;HaplotypeScore=88.2851;InbreedingCoeff=0.0052;MQ=44.58;MQ0=63;MQRankSum=-1.574;QD=2.12;ReadPosRankSum=0.216;VQSLOD=1.3583;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:10,2:7:2.57:0,3,11	./.	0/0:94,0:16:43.74:0,44,650	0/0:120,0:19:45.10:0,45,740	0/0:4,0:3:0.39:0,0,1	0/0:7,1:6:5.69:0,6,111	0/0:11,0:7:14.95:0,15,279	0/0:9,0:5:6.02:0,6,112	0/0:5,1:6:9.03:0,9,166	0/1:11,1:10:32.32:32,0,420	0/0:4,3:6:2.86:0,3,56	0/1:6,3:9:24.75:25,0,321	0/1:5,2:7:43.79:44,0,208	0/1:5,3:6:28.78:29,0,205	0/0:25,0:25:63.22:0,63,1172	0/0:4,1:4:12.04:0,12,199	0/0:8,0:6:9.03:0,9,168	1/1:3,1:3:0.13:1,0,0	0/0:6,0:3:9.03:0,9,168	./.	1/1:14,0:6:1.72:4,2,0	0/0:4,1:5:2.93:0,3,56	0/0:5,2:5:4.26:0,4,59	0/0:7,1:6:2.71:0,3,56	0/0:1,1:2:4.26:0,4,59	0/1:4,2:4:62.29:62,0,100	0/1:7,3:9:44.87:45,0,397	1/1:2,0:1:3.01:35,3,0
chr10	30769746	.	CA	C	15458.78	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-0.110;DP=645;FS=0.526;HRun=7;HaplotypeScore=65.1250;InbreedingCoeff=0.9981;MQ=83.44;MQ0=0;MQRankSum=-9.253;QD=26.52;ReadPosRankSum=5.234;VQSLOD=5.1945;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,44:47:99:1194,117,0	1/1:1,11:12:33.07:337,33,0	0/0:24,0:24:58.10:0,58,762	0/0:12,0:12:30.09:0,30,368	1/1:2,22:24:60.13:612,60,0	1/1:3,23:26:69.15:704,69,0	1/1:1,24:25:63.14:643,63,0	1/1:4,29:33:87.14:860,87,0	1/1:1,22:23:60.13:612,60,0	1/1:1,32:33:90.17:904,90,0	1/1:0,18:18:54.12:551,54,0	1/1:2,17:19:42.09:428,42,0	1/1:2,17:19:51.12:520,51,0	1/1:1,24:25:72.16:735,72,0	0/0:26,0:26:75.23:0,75,929	1/1:2,23:25:66.15:673,66,0	1/1:2,22:24:57.13:582,57,0	1/1:3,10:13:30.07:306,30,0	1/1:4,18:22:54.12:551,54,0	1/1:2,26:28:78.18:795,78,0	1/1:1,17:18:51.12:520,51,0	1/1:1,21:22:60.13:612,60,0	1/1:1,22:23:63.01:643,63,0	1/1:5,21:27:61.54:595,62,0	1/1:2,20:22:54.12:551,54,0	1/1:0,20:20:60.14:612,60,0	1/1:1,25:26:69.16:704,69,0	1/1:0,9:9:21.05:214,21,0
chr10	30771328	.	GCTA	G	21999.52	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=6.975;DP=647;FS=3.220;HRun=0;HaplotypeScore=102.3685;InbreedingCoeff=0.9986;MQ=86.58;MQ0=0;MQRankSum=-8.877;QD=39.85;ReadPosRankSum=4.233;VQSLOD=6.1606;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,35:38:93.32:1494,93,0	1/1:0,10:10:27.09:433,27,0	0/0:30,0:30:72.21:0,72,1535	0/0:23,0:23:63.22:0,63,1297	1/1:1,15:16:45.15:723,45,0	1/1:2,21:23:60.20:962,60,0	1/1:1,20:21:57.19:915,57,0	1/1:3,25:28:69.24:1105,69,0	0/0:16,0:16:48.15:0,48,1017	1/1:3,25:28:72.22:1132,72,0	1/1:0,9:9:24.08:384,24,0	1/1:1,26:27:69.24:1109,69,0	1/1:2,22:24:57.19:915,57,0	1/1:1,20:21:54.18:866,54,0	0/0:26,0:26:69.24:0,69,1514	1/1:1,25:26:69.24:1108,69,0	1/1:3,30:33:81.28:1302,81,0	1/1:1,22:23:54.18:868,54,0	1/1:3,19:22:57.19:907,57,0	1/1:1,21:22:60.20:962,60,0	1/1:4,29:33:72.25:1153,72,0	1/1:4,16:20:48.16:769,48,0	1/1:3,17:20:45.15:723,45,0	1/1:3,26:29:62.95:1012,63,0	1/1:2,18:20:48.16:771,48,0	1/1:3,28:31:84.27:1327,84,0	1/1:4,16:20:42.14:675,42,0	1/1:0,8:8:24.08:386,24,0
chr10	30771787	.	GCTCTCTTT	G	6643.21	PASS	AB=1.000;AC=49;AF=0.875;AN=56;BaseQRankSum=4.355;DP=495;FS=2.008;HRun=0;HaplotypeScore=171.4023;InbreedingCoeff=0.7842;MQ=74.34;MQ0=11;MQRankSum=-1.114;QD=16.20;ReadPosRankSum=5.418;VQSLOD=3.6369;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:32,0:30:45.54:341,46,0	1/1:7,0:7:20.92:164,21,0	0/0:34,0:24:19.40:0,19,404	0/0:33,0:22:30.26:0,30,339	1/1:17,3:20:24.10:174,24,0	1/1:13,1:15:26.55:276,27,0	1/1:24,0:24:44.70:358,45,0	1/1:21,0:21:47.86:410,48,0	1/1:20,0:20:36.44:308,36,0	1/1:8,0:8:23.96:283,24,0	1/1:13,1:12:17.87:194,18,0	1/1:17,1:18:32.88:280,33,0	1/1:11,1:12:20.93:223,21,0	1/1:12,0:12:9:115,9,0	0/0:18,0:18:48.09:0,48,1053	1/1:13,0:14:25.87:220,26,0	1/1:11,0:10:23.95:236,24,0	0/1:16,0:15:25.96:177,0,26	1/1:18,0:18:43.86:333,44,0	1/1:17,0:21:42.49:288,42,0	1/1:20,0:19:35.94:295,36,0	1/1:11,0:11:23.54:197,24,0	1/1:13,4:16:41.15:377,41,0	1/1:21,0:20:36.20:284,36,0	1/1:11,0:10:26.93:219,27,0	1/1:16,1:17:44.91:507,45,0	1/1:16,0:16:33.83:244,34,0	1/1:1,12:12:6.02:141,6,0
chr10	30771792	.	CTT	C	6446.50	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=5.240;DP=467;FS=1.268;HRun=3;HaplotypeScore=117.5376;InbreedingCoeff=0.9296;MQ=68.66;MQ0=16;MQRankSum=-1.630;QD=16.74;ReadPosRankSum=3.772;VQSLOD=2.3940;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:24:50.84:405,51,0	1/1:7,0:7:20.92:164,21,0	0/0:30,0:20:19.40:0,19,404	0/0:30,0:19:29.73:0,30,339	1/1:17,3:19:25.30:193,25,0	1/1:12,4:16:28.49:235,28,0	1/1:19,0:19:44.90:369,45,0	1/1:18,0:18:47.91:413,48,0	1/1:17,1:18:41.70:359,42,0	1/1:7,1:8:23.89:209,24,0	1/1:12,0:9:17.85:147,18,0	1/1:15,0:15:35.74:275,36,0	1/1:12,0:12:20.93:171,21,0	1/1:11,1:12:9:84,9,0	0/0:22,0:21:51.04:0,51,618	1/1:13,1:13:26.67:203,27,0	1/1:11,0:10:23.87:186,24,0	1/1:17,0:15:17.60:219,18,0	1/1:19,0:18:43.47:353,43,0	1/1:20,0:20:44.68:374,45,0	1/1:18,0:17:35.94:295,36,0	1/1:10,1:11:23.86:198,24,0	1/1:17,1:17:41.72:320,42,0	1/1:19,0:18:35.83:309,36,0	1/1:11,0:10:26.93:219,27,0	1/1:13,2:15:44.90:402,45,0	1/1:16,0:16:37.55:297,38,0	1/1:13,0:12:5.97:47,6,0
chr10	30771846	.	CTG	C	1831.92	PASS	AB=0.963;AC=41;AF=0.759;AN=54;BaseQRankSum=3.083;DP=488;FS=4.104;HRun=0;HaplotypeScore=170.1709;InbreedingCoeff=-0.1092;MQ=36.22;MQ0=39;MQRankSum=-1.011;QD=3.88;ReadPosRankSum=2.369;VQSLOD=2.6421;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:21:21.91:144,22,0	1/1:4,0:4:1.36:3,1,0	./.	0/0:12,0:2:2.96:0,3,19	0/1:30,0:30:8.21:58,0,8	1/1:24,0:24:18.14:196,18,0	1/1:17,0:16:18.72:114,19,0	0/1:23,0:19:19.87:21,0,20	0/1:8,12:19:17.19:18,0,17	0/1:14,0:11:25.54:26,0,70	0/1:12,0:10:14.34:14,0,17	1/1:13,0:13:0.47:67,0,0	1/1:23,0:21:37.64:219,38,0	1/1:21,0:22:29.27:182,29,0	0/1:25,0:24:7.08:7,0,261	1/1:13,0:12:20.29:116,20,0	0/1:17,0:16:6.48:109,0,6	0/1:11,0:9:27.55:28,0,33	1/1:12,0:9:7.91:39,8,0	0/1:23,0:20:5.09:9,0,5	1/1:15,0:11:2.49:16,2,0	1/1:23,0:22:21.01:107,21,0	1/1:26,0:22:9.01:55,9,0	1/1:22,0:17:17.07:116,17,0	1/1:14,0:13:10.48:53,10,0	1/1:17,0:17:17.85:182,18,0	0/1:16,0:15:2.43:62,0,2	0/1:7,0:4:11.30:11,0,15
chr10	30771848	.	GTC	G	4117.98	PASS	AB=0.950;AC=47;AF=0.870;AN=54;BaseQRankSum=1.481;DP=479;FS=10.535;HRun=0;HaplotypeScore=160.3845;InbreedingCoeff=0.2653;MQ=36.33;MQ0=38;MQRankSum=-0.158;QD=9.42;ReadPosRankSum=0.012;VQSLOD=2.9834;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:24,2:20:21.96:241,22,0	1/1:5,0:5:1.36:7,1,0	./.	0/0:13,0:2:1.82:0,2,5	1/1:25,1:29:14.41:130,14,0	1/1:19,1:23:29.72:257,30,0	1/1:17,0:16:25.74:223,26,0	1/1:22,0:18:35.52:258,36,0	1/1:15,1:19:4.19:21,4,0	1/1:11,0:11:12.99:71,13,0	1/1:11,0:9:3.46:25,3,0	1/1:12,1:13:13.28:164,13,0	1/1:22,2:22:48.29:467,48,0	1/1:18,4:22:29.50:337,29,0	0/0:24,0:23:30.23:0,30,407	1/1:13,0:12:20.86:229,21,0	1/1:14,3:16:8.43:226,8,0	0/1:10,1:9:68.88:70,0,69	0/1:12,0:9:41.13:50,0,41	1/1:20,0:18:0.92:14,1,0	1/1:15,0:11:2.66:18,3,0	1/1:21,2:23:13.10:230,13,0	1/1:23,2:22:9.21:105,9,0	1/1:19,3:17:19.86:231,20,0	1/1:12,1:12:10.30:126,10,0	1/1:14,0:16:37.15:352,37,0	0/1:13,1:14:0.75:222,0,1	1/1:7,0:4:6.83:44,7,0
chr10	30771852	.	CTCTG	C	3686.95	PASS	AB=0.911;AC=40;AF=0.741;AN=54;BaseQRankSum=2.741;DP=488;FS=1.412;HRun=0;HaplotypeScore=170.1523;InbreedingCoeff=0.1460;MQ=37.34;MQ0=38;MQRankSum=-0.876;QD=8.38;ReadPosRankSum=1.860;VQSLOD=2.8493;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:27,2:24:0.62:135,0,1	0/0:5,0:5:2.94:0,3,18	./.	0/0:13,0:2:5.96:0,6,44	0/1:20,9:29:0.85:123,0,1	1/1:20,5:25:35.48:313,35,0	1/1:19,2:20:30.51:285,31,0	1/1:5,14:14:37.99:328,38,0	1/1:19,0:18:5.91:38,6,0	0/1:12,0:10:41.78:47,0,42	0/1:9,0:8:15.81:16,0,18	0/1:12,1:13:8.33:86,0,8	1/1:17,7:23:20.94:311,21,0	1/1:18,3:22:27.05:222,27,0	0/0:25,0:23:36.64:0,37,629	1/1:7,4:11:15.90:246,16,0	0/1:18,0:17:4.99:59,0,5	0/1:12,0:10:22.50:22,0,67	1/1:14,1:12:2.09:140,2,0	1/1:17,3:16:5.55:66,6,0	1/1:12,3:11:4.54:57,5,0	1/1:18,6:23:23.20:205,23,0	1/1:21,6:23:10.82:64,11,0	1/1:21,0:16:8.93:136,9,0	1/1:11,3:13:11.09:64,11,0	1/1:9,5:15:38.80:512,39,0	0/1:11,4:16:19.52:149,0,20	1/1:4,2:4:6.86:64,7,0
chr10	30771935	.	G	GTC	924.68	PASS	AB=0.989;AC=24;AF=0.444;AN=54;BaseQRankSum=6.508;DP=714;FS=13.167;HRun=0;HaplotypeScore=185.9116;InbreedingCoeff=0.1620;MQ=83.91;MQ0=7;MQRankSum=-6.176;QD=2.94;ReadPosRankSum=0.905;VQSLOD=2.0356;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:32,0:32:5.51:6,0,42	1/1:8,0:8:0.94:1,1,0	0/0:89,0:55:48.80:0,49,730	0/0:122,1:84:58.63:0,59,858	0/0:25,0:25:3:0,3,25	0/0:21,0:21:0.47:0,0,1	1/1:21,2:23:5.63:61,6,0	0/1:32,1:33:99:184,0,235	0/0:20,0:20:35.95:0,36,453	0/1:18,0:18:30.44:152,0,30	0/0:12,0:12:2.99:0,3,24	1/1:21,0:21:5.81:48,6,0	0/1:24,0:24:1.32:41,0,1	1/1:18,0:18:0.46:1,0,0	0/0:24,0:23:57.18:0,57,740	0/0:14,0:14:6.02:0,6,77	0/0:14,0:14:7.33:0,7,83	1/1:9,0:9:2.84:14,3,0	0/1:27,0:27:80.52:297,0,81	1/1:17,0:17:2.85:15,3,0	./.	1/1:17,0:17:2.92:17,3,0	0/0:22,0:22:2.94:0,3,19	0/1:15,1:16:0:0,0,0	0/0:19,0:19:2.98:0,3,24	0/1:19,0:19:99:176,0,106	0/1:24,0:24:17.55:40,0,18	1/1:9,0:9:2.84:14,3,0
chr10	30771945	.	G	GTC	1788.28	PASS	AB=0.907;AC=28;AF=0.583;AN=48;BaseQRankSum=6.283;DP=717;FS=2.639;HRun=0;HaplotypeScore=171.5135;InbreedingCoeff=0.2630;MQ=89.51;MQ0=8;MQRankSum=-4.216;QD=4.07;ReadPosRankSum=4.232;VQSLOD=2.8188;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:35,0:35:2.90:50,3,0	1/1:10,0:10:5.99:71,6,0	0/0:104,0:67:94.36:0,94,1269	0/1:126,0:88:28.52:29,0,1077	0/0:22,0:22:0:0,0,0	0/0:20,0:20:0.47:0,0,1	0/1:11,11:22:34.11:34,0,107	0/1:19,7:26:99:263,0,173	0/0:21,0:21:41.81:0,42,582	1/1:15,0:15:2.26:269,2,0	./.	1/1:19,0:19:6.02:93,6,0	1/1:22,0:22:8.99:89,9,0	./.	0/0:21,0:20:57.18:0,57,788	0/0:16,0:16:3.01:0,3,43	0/0:15,0:15:1.50:0,2,11	1/1:10,0:10:2.82:25,3,0	1/1:24,0:24:19.93:494,20,0	1/1:18,0:18:5.73:63,6,0	./.	1/1:20,0:20:3.01:49,3,0	0/1:21,0:21:0.01:0,0,0	0/1:15,0:15:0:0,0,0	./.	0/1:22,0:22:89.73:210,0,90	1/1:22,0:22:12.03:159,12,0	1/1:10,0:10:3.01:32,3,0
chr10	30771946	.	T	TCTCTCTCTCTGC	10071.26	PASS	AB=0.531;AC=31;AF=0.574;AN=54;BaseQRankSum=-7.177;DP=790;FS=2.203;HRun=0;HaplotypeScore=208.0926;InbreedingCoeff=0.4603;MQ=87.89;MQ0=8;MQRankSum=-3.576;QD=25.30;ReadPosRankSum=-0.207;VQSLOD=4.0685;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:4,25:37:56.56:235,0,57	1/1:0,7:10:5.92:148,6,0	0/0:105,0:68:25.50:0,25,1437	0/0:127,0:87:4.88:0,5,1428	0/1:1,16:24:0.18:1,0,0	0/0:0,16:23:0:0,0,0	1/1:22,0:22:17.88:288,18,0	1/1:27,0:27:66.14:1382,66,0	0/0:18,0:18:41.88:0,42,1135	1/1:0,12:18:47.98:1712,48,0	0/1:0,10:15:0:0,0,0	1/1:1,16:27:5.96:355,6,0	1/1:4,16:25:8.92:406,9,0	0/0:0,13:17:0:0,0,0	0/0:21,0:20:56.77:0,57,1677	0/0:2,12:19:3.01:0,3,79	0/1:5,9:18:15.62:196,0,16	1/1:1,8:13:1.29:183,1,0	1/1:3,17:32:89.97:2450,90,0	1/1:0,15:18:5.75:187,6,0	./.	1/1:1,18:27:2.84:85,3,0	0/0:1,17:23:0:0,0,0	0/1:2,10:16:0:0,0,0	0/0:2,11:19:0:0,0,0	1/1:1,16:29:74.61:1572,75,0	1/1:2,17:28:12.04:687,12,0	1/1:0,10:12:3.01:186,3,0
chr10	30772337	.	A	ATGTG	12317.99	PASS	AB=0.609;AC=44;AF=0.815;AN=54;BaseQRankSum=-2.513;DP=844;FS=0.733;HRun=0;HaplotypeScore=159.7984;InbreedingCoeff=0.5222;MQ=61.40;MQ0=9;MQRankSum=-0.569;QD=16.65;ReadPosRankSum=-0.391;VQSLOD=4.2663;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:32,20:59:14.38:444,14,0	1/1:8,0:10:9:131,9,0	0/0:23,0:12:5.85:0,6,54	./.	1/1:6,17:31:29.14:559,29,0	1/1:6,16:24:32.58:635,33,0	1/1:18,13:31:29.84:645,30,0	1/1:29,14:45:7.11:596,7,0	0/1:16,0:40:99:140,0,114	1/1:31,0:31:42.73:514,43,0	0/0:9,0:10:0.88:0,1,2	1/1:14,20:37:41.95:862,42,0	1/1:13,20:36:38.25:741,38,0	0/1:10,17:32:18.58:490,0,19	0/0:32,0:33:39.61:0,40,846	1/1:15,17:35:35.86:805,36,0	1/1:7,18:27:35.86:804,36,0	1/1:16,14:33:41.35:829,41,0	1/1:18,0:19:18.32:171,18,0	1/1:25,2:28:27.09:503,27,0	1/1:53,0:57:32.78:429,33,0	1/1:15,7:23:9.03:216,9,0	1/1:8,14:23:8.69:215,9,0	1/1:13,12:29:23.82:517,24,0	1/1:8,10:21:23.82:509,24,0	1/1:28,5:34:53.89:898,54,0	1/1:11,13:29:33.96:664,34,0	0/0:4,0:4:0.15:0,0,1
chr10	30772391	.	ATG	A	1097.30	PASS	AB=0.882;AC=7;AF=0.125;AN=56;BaseQRankSum=7.798;DP=925;FS=6.326;HRun=0;HaplotypeScore=175.2008;InbreedingCoeff=0.7214;MQ=59.52;MQ0=13;MQRankSum=-4.426;QD=13.55;ReadPosRankSum=1.739;VQSLOD=2.8089;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:54:70.90:0,71,1375	1/1:3,12:15:14.94:190,15,0	0/0:73,1:35:76.98:0,77,1120	0/0:71,0:33:59.80:0,60,863	0/0:28,1:29:9.78:0,10,691	0/0:23,1:24:12.99:0,13,755	0/0:23,1:24:7.02:0,7,626	0/0:37,2:39:28.88:0,29,1484	0/0:45,1:46:89.50:0,90,1412	1/1:2,24:26:72.21:901,72,0	1/1:3,7:9:5.99:77,6,0	0/0:45,0:45:99:0,105,1619	0/0:33,1:34:40.05:0,40,1178	0/0:29,1:30:69.24:0,69,1135	0/0:31,0:31:75.21:0,75,1190	0/0:25,0:25:54.17:0,54,852	0/0:33,0:33:68.79:0,69,1059	0/0:32,0:32:74.06:0,74,1186	0/0:19,0:19:33.47:0,33,609	0/0:32,1:33:39.68:0,40,1133	0/0:67,3:70:14.74:0,15,1810	0/0:22,1:23:12.99:0,13,761	0/0:23,0:23:44.46:0,44,739	0/0:31,0:31:72.25:0,72,1183	0/0:22,0:22:60.20:0,60,994	0/1:26,4:30:68.63:69,0,1038	0/0:28,0:27:62.94:0,63,989	0/0:4,0:4:7.66:0,8,148
chr10	30772443	.	A	ATG	1949.54	PASS	AB=0.973;AC=7;AF=0.125;AN=56;BaseQRankSum=10.241;DP=983;FS=2.473;HRun=0;HaplotypeScore=171.5007;InbreedingCoeff=0.8244;MQ=56.38;MQ0=9;MQRankSum=-6.403;QD=17.25;ReadPosRankSum=0.339;VQSLOD=3.8830;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,108,1389	1/1:17,1:18:23.29:306,23,0	0/0:47,0:25:61.92:0,62,715	0/0:42,0:24:54.29:0,54,587	0/0:27,0:27:69.19:0,69,867	0/0:19,0:18:45.14:0,45,572	0/0:36,0:36:87.22:0,87,1073	0/0:49,0:48:99:0,111,1402	0/0:36,0:36:99:0,102,1257	1/1:36,2:38:99:1586,111,0	1/1:20,1:21:11.79:157,12,0	0/0:45,0:45:99:0,114,1436	0/0:32,0:32:84.24:0,84,1053	0/0:37,0:37:90.26:0,90,1130	0/0:31,0:31:75.23:0,75,956	0/0:31,0:31:87.26:0,87,1103	0/0:27,0:27:75.19:0,75,941	0/0:39,0:38:99:0,107,1371	0/0:21,0:18:44.95:0,45,531	0/0:38,0:38:87.24:0,87,1087	0/0:91,0:92:99:0,138,1743	0/0:37,0:37:93.29:0,93,1196	0/0:28,0:28:72.22:0,72,911	0/0:39,0:39:99:0,108,1373	0/0:24,0:24:66.21:0,66,844	0/1:35,1:36:46.10:46,0,973	0/0:31,0:30:93.29:0,93,1191	0/0:15,0:14:39.08:0,39,462
chr10	30772452	.	T	TG	804.99	PASS	AB=0.619;AC=4;AF=0.071;AN=56;BaseQRankSum=10.620;DP=972;FS=6.061;HRun=1;HaplotypeScore=156.6316;InbreedingCoeff=0.5785;MQ=56.64;MQ0=7;MQRankSum=-6.602;QD=10.32;ReadPosRankSum=1.420;VQSLOD=1.7183;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,124,1656	0/1:9,9:18:38.74:79,0,39	0/0:44,0:27:75.12:0,75,952	0/0:43,0:27:71.39:0,71,872	0/0:26,0:26:75.10:0,75,1004	0/0:19,0:18:54:0,54,688	0/0:37,0:37:99:0,108,1418	0/0:44,0:43:99:0,123,1661	0/0:39,0:39:99:0,114,1532	1/1:17,23:40:75.42:773,75,0	0/1:5,14:20:3.28:69,0,3	0/0:43,0:43:99:0,126,1697	0/0:33,0:33:99:0,99,1270	0/0:34,0:34:99:0,99,1325	0/0:32,0:32:90.27:0,90,1211	0/0:32,0:32:93.26:0,93,1260	0/0:27,0:27:81.21:0,81,1086	0/0:39,0:38:99:0,114,1544	0/0:23,0:20:60.11:0,60,719	0/0:40,0:40:96.24:0,96,1279	0/0:79,0:79:99:0,158,1973	0/0:35,0:35:99:0,102,1381	0/0:27,0:27:75.23:0,75,1013	0/0:44,0:44:99:0,123,1672	0/0:27,0:27:66.21:0,66,907	0/0:34,1:35:49.81:0,50,1238	0/0:33,0:32:99:0,99,1375	0/0:14,0:13:39.11:0,39,527
chr10	30772455	.	T	TTTG	2345.38	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=12.896;DP=978;FS=14.271;HRun=0;HaplotypeScore=188.2782;InbreedingCoeff=0.9544;MQ=56.70;MQ0=7;MQRankSum=-9.148;QD=30.46;ReadPosRankSum=-3.752;VQSLOD=2.2572;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,129,2012	1/1:8,9:18:46.99:513,47,0	0/0:41,0:27:75.05:0,75,1071	0/0:43,0:26:70.54:0,71,1047	0/0:29,0:29:78.08:0,78,1235	0/0:19,0:18:53.97:0,54,802	0/0:37,0:37:99:0,108,1694	0/0:43,0:42:99:0,125,1956	0/0:41,0:41:99:0,117,1836	1/1:16,23:40:99:1590,103,0	1/1:3,14:19:37.99:384,38,0	0/0:41,0:41:99:0,120,1971	0/0:34,0:34:96.18:0,96,1468	0/0:34,0:34:96.26:0,96,1527	0/0:34,0:34:90.27:0,90,1430	0/0:34,0:34:98.86:0,99,1556	0/0:27,0:27:75.25:0,75,1250	0/0:39,0:38:99:0,114,1847	0/0:23,0:20:49.86:0,50,710	0/0:40,0:40:99:0,111,1638	0/0:77,0:77:99:0,147,2277	0/0:36,0:36:99:0,99,1625	0/0:25,0:25:72.20:0,72,1185	0/0:45,0:45:99:0,129,2029	0/0:28,0:28:78.05:0,78,1142	0/0:34,1:35:4.70:0,5,1455	0/0:33,0:32:99:0,99,1625	0/0:14,0:13:36.12:0,36,611
chr10	30772486	.	CGT	C	3162.43	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.511;DP=876;FS=1.335;HRun=0;HaplotypeScore=130.9611;InbreedingCoeff=0.9803;MQ=59.53;MQ0=4;MQRankSum=0.484;QD=25.10;ReadPosRankSum=0.186;VQSLOD=4.5798;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,138,2299	0/0:15,0:15:30.90:0,31,144	0/0:35,0:25:54.24:0,54,704	0/0:29,0:13:9.45:0,9,147	0/0:28,0:28:69.18:0,69,1110	0/0:20,0:19:57.16:0,57,912	0/0:40,0:40:99:0,105,1715	0/0:36,0:36:87.28:0,87,1436	0/0:36,0:36:99:0,99,1658	0/0:32,0:32:85.87:0,86,507	0/0:16,0:16:25.18:0,25,114	0/0:32,0:32:75.23:0,75,1213	0/0:34,0:34:99:0,99,1630	0/0:32,0:32:84.26:0,84,1376	0/0:37,0:37:99:0,102,1700	0/0:32,0:32:90.29:0,90,1499	0/0:26,0:26:69.17:0,69,1121	0/0:31,0:31:77.66:0,78,1382	1/1:5,20:25:34.17:650,34,0	1/1:1,27:27:69.11:849,69,0	1/1:6,67:72:99:1806,138,0	0/0:31,0:31:81.28:0,81,1378	0/0:17,0:17:42.14:0,42,718	0/0:50,0:50:99:0,132,2171	0/0:16,0:16:42.14:0,42,716	0/0:35,0:35:90.06:0,90,1386	0/0:31,0:31:78.25:0,78,1299	0/0:10,0:10:30.10:0,30,513
chr10	30772495	.	GT	G	1440.86	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.443;DP=878;FS=15.554;HRun=5;HaplotypeScore=119.3944;InbreedingCoeff=0.9925;MQ=62.39;MQ0=5;MQRankSum=-1.188;QD=22.17;ReadPosRankSum=-2.681;VQSLOD=1.6477;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,149,1970	1/1:1,14:15:30.08:340,30,0	0/0:35,0:26:37.78:0,38,498	0/0:27,0:11:15.10:0,15,175	0/0:29,0:29:75.22:0,75,988	0/0:19,0:18:54.11:0,54,683	0/0:37,0:37:99:0,105,1420	0/0:39,0:39:99:0,110,1424	0/0:39,0:39:99:0,114,1506	1/1:7,28:35:78.20:870,78,0	1/1:1,14:14:33.09:373,33,0	0/0:29,0:29:78.19:0,78,1018	0/0:37,0:37:99:0,108,1449	0/0:32,0:32:90.22:0,90,1169	0/0:37,0:37:99:0,108,1420	0/0:31,0:31:90.30:0,90,1223	0/0:25,0:25:72.24:0,72,979	0/0:32,0:32:90.09:0,90,1161	0/0:23,0:22:24.43:0,24,87	0/0:29,0:28:23.80:0,24,85	0/0:72,0:72:68.02:0,68,301	0/0:32,0:32:87.27:0,87,1156	0/0:18,0:18:48.15:0,48,638	0/0:46,0:46:99:0,132,1770	0/0:19,0:19:45.15:0,45,612	0/0:29,1:30:32.21:0,32,806	0/0:30,0:30:90.30:0,90,1217	0/0:13,0:13:39.13:0,39,525
chr10	30775088	.	C	CGGAAGGAA	17170.22	PASS	AB=0.812;AC=44;AF=0.786;AN=56;BaseQRankSum=-8.237;DP=697;FS=0.000;HRun=0;HaplotypeScore=135.7066;InbreedingCoeff=0.3935;MQ=58.06;MQ0=2;MQRankSum=-4.630;QD=27.83;ReadPosRankSum=-4.110;VQSLOD=3.3484;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,16:28:18.05:590,18,0	0/0:3,0:17:0.59:0,1,263	0/1:20,0:14:2.36:2,0,26	0/0:14,0:10:8.70:0,9,102	1/1:6,23:40:83.88:2026,84,0	1/1:6,19:32:26.96:1012,27,0	1/1:5,12:22:3.01:125,3,0	1/1:28,0:28:54.03:711,54,0	1/1:5,18:26:20.77:872,21,0	0/1:4,0:16:18.03:18,0,336	0/0:2,0:28:4.03:0,4,750	1/1:5,12:20:18.06:734,18,0	1/1:6,25:36:27.09:1122,27,0	1/1:11,16:34:27.09:1074,27,0	0/0:21,0:21:54.07:0,54,1035	1/1:2,15:23:17.88:748,18,0	1/1:9,7:21:3.01:125,3,0	0/1:11,10:21:12.94:485,0,13	1/1:6,0:27:58.46:462,58,0	1/1:11,0:30:0.20:312,0,0	0/1:6,0:24:8.14:219,0,8	1/1:8,14:26:33.04:1077,33,0	1/1:4,17:24:21.07:873,21,0	1/1:9,12:24:6.02:249,6,0	1/1:9,16:28:24.08:998,24,0	1/1:6,18:28:7.15:1340,7,0	1/1:10,23:34:42.14:1746,42,0	1/1:0,2:2:6.02:250,6,0
chr10	30776617	.	A	AATT	2025.78	PASS	AB=1.000;AC=15;AF=0.278;AN=54;BaseQRankSum=-6.716;DP=331;FS=1.412;HRun=0;HaplotypeScore=45.8664;InbreedingCoeff=0.7437;MQ=72.15;MQ0=0;MQRankSum=1.941;QD=24.12;ReadPosRankSum=-1.106;VQSLOD=3.2170;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:30.10:0,30,423	1/1:5,3:8:9.03:181,9,0	1/1:7,0:7:2.11:18,2,0	0/1:5,0:5:9.51:10,0,14	0/0:16,0:16:27.09:0,27,381	0/0:21,0:21:48.15:0,48,660	0/0:4,0:4:9.01:0,9,107	0/0:26,0:26:45.14:0,45,618	0/0:10,0:10:15.01:0,15,188	1/1:3,9:12:27.08:509,27,0	1/1:3,4:7:15.05:295,15,0	0/0:10,0:10:12.04:0,12,169	0/0:10,0:10:18.06:0,18,250	0/0:7,0:7:9.02:0,9,112	0/0:9,0:9:15.04:0,15,194	0/0:8,0:8:15.05:0,15,212	0/0:26,0:26:47.30:0,47,674	0/0:6,0:6:9.03:0,9,124	1/1:9,11:20:36.12:699,36,0	1/1:11,8:19:24.08:432,24,0	1/1:4,2:6:3.01:60,3,0	./.	0/0:6,0:6:15.05:0,15,212	0/0:3,0:3:3.01:0,3,40	0/0:19,0:19:51.17:0,51,720	0/0:21,0:21:36.11:0,36,491	0/0:19,0:19:44.41:0,44,615	0/0:3,0:3:6.02:0,6,80
chr10	30777431	.	G	GGACACACACACACACAC	1640.03	PASS	AB=0.957;AC=15;AF=0.268;AN=56;BaseQRankSum=6.145;DP=390;FS=10.697;HRun=0;HaplotypeScore=146.2296;InbreedingCoeff=-0.1348;MQ=38.47;MQ0=17;MQRankSum=-6.315;QD=9.37;ReadPosRankSum=0.594;VQSLOD=1.9702;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:21.58:0,22,273	1/1:1,0:3:3.01:188,3,0	0/0:21,0:8:17.21:0,17,263	0/0:28,0:14:24.87:0,25,421	0/0:5,0:13:6.02:0,6,78	0/0:15,0:13:13.38:0,13,159	0/1:24,0:19:39.09:39,0,140	0/1:15,0:12:18.90:19,0,421	0/1:10,0:10:21.88:22,0,237	0/1:21,0:20:99:279,0,373	0/0:11,0:10:3.01:0,3,39	0/0:20,0:19:21.38:0,21,249	0/0:7,0:7:14.96:0,15,194	0/1:11,0:10:65.70:71,0,66	0/0:11,0:11:27.02:0,27,911	0/1:7,2:18:99:179,0,104	0/1:12,0:11:55.61:120,0,56	0/0:9,0:7:3.04:0,3,198	0/1:9,0:10:79.88:80,0,177	0/0:6,0:11:15.05:0,15,206	0/0:21,0:20:12.51:0,13,156	0/0:13,0:13:12.02:0,12,145	0/0:7,0:7:0:0,0,0	0/1:16,0:15:99:192,0,137	0/0:7,0:7:0.64:0,1,35	0/1:17,0:17:99:493,0,156	0/1:8,0:7:32.91:33,0,69	1/1:9,0:6:6.02:78,6,0
chr10	30777508	.	GGA	G	682.20	PASS	AB=0.944;AC=23;AF=0.523;AN=44;BaseQRankSum=0.725;DP=258;FS=1.026;HRun=0;HaplotypeScore=44.2687;InbreedingCoeff=-0.0549;MQ=29.31;MQ0=67;MQRankSum=-2.691;QD=3.75;ReadPosRankSum=2.991;VQSLOD=1.5025;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:4:3:0,3,25	./.	./.	./.	1/1:10,0:10:1.25:3,1,0	0/0:3,0:2:0.89:0,1,2	1/1:7,0:4:5.98:53,6,0	0/1:20,0:14:26.10:141,0,26	1/1:4,0:2:2.84:14,3,0	0/1:19,1:13:45.22:66,0,45	0/1:17,0:17:15.64:22,0,16	0/1:8,0:7:17.17:40,0,17	0/1:6,1:6:11.63:12,0,54	0/1:11,0:10:7.93:8,0,56	0/0:7,0:6:0:0,0,0	1/1:6,0:6:1.24:3,1,0	0/0:13,0:7:8.40:0,8,48	./.	1/1:10,4:8:12.51:148,13,0	0/0:13,0:12:0:0,0,0	0/1:12,6:10:6.46:54,0,6	./.	0/1:12,0:9:10.99:11,0,19	0/0:12,0:8:14.34:0,14,130	1/1:10,0:7:5.89:37,6,0	0/1:11,1:8:9.63:147,0,10	1/1:5,1:4:5.95:51,6,0	./.
chr10	30777510	.	A	AGG	1197.82	PASS	AB=0.866;AC=25;AF=0.521;AN=48;BaseQRankSum=-1.648;DP=269;FS=0.958;HRun=3;HaplotypeScore=56.2804;InbreedingCoeff=-0.1220;MQ=30.97;MQ0=66;MQRankSum=-2.107;QD=5.73;ReadPosRankSum=1.961;VQSLOD=-0.3117;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:4:2.12:0,2,23	./.	./.	./.	1/1:5,6:11:1.21:2,1,0	0/0:3,0:2:0.84:0,1,1	1/1:4,2:4:6.02:100,6,0	0/1:15,5:14:33.74:232,0,34	1/1:4,0:2:5.85:68,6,0	1/1:16,4:13:5.03:149,5,0	0/1:9,8:17:15.49:42,0,15	0/1:10,0:9:14.79:43,0,15	0/1:7,0:6:3.47:17,0,3	0/1:7,5:11:17.82:18,0,53	0/1:7,0:6:0:0,0,0	1/1:7,1:8:2.09:5,2,0	0/1:14,0:8:23.77:24,0,44	0/0:7,0:1:0:0,0,0	0/1:13,1:8:17.22:183,0,17	0/0:11,1:11:0:0,0,0	0/1:18,0:10:10.18:106,0,10	0/0:4,0:4:0:0,0,0	0/1:7,5:9:14.08:14,0,19	0/0:14,0:10:14.18:0,14,128	1/1:7,4:8:5.93:58,6,0	0/1:7,5:8:9.61:222,0,10	1/1:6,0:4:4.13:36,4,0	./.
chr10	30777800	.	CATGT	C	15398.58	PASS	AB=0.623;AC=48;AF=0.857;AN=56;BaseQRankSum=3.606;DP=640;FS=10.525;HRun=0;HaplotypeScore=124.5585;InbreedingCoeff=0.6215;MQ=62.08;MQ0=5;MQRankSum=0.569;QD=26.97;ReadPosRankSum=2.725;VQSLOD=4.3390;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,20:23:46.71:743,47,0	1/1:2,7:9:15.05:246,15,0	0/0:27,0:10:5.26:0,5,125	0/0:17,0:7:5.99:0,6,96	1/1:7,19:26:29.89:493,30,0	1/1:6,24:30:57.19:936,57,0	0/1:5,12:17:11.87:410,0,12	0/1:14,15:29:21:677,0,21	1/1:1,15:16:33.11:542,33,0	1/1:4,26:30:72.22:1132,72,0	1/1:2,23:25:35.92:591,36,0	1/1:8,21:29:51.17:837,51,0	1/1:8,22:30:66.23:1083,66,0	1/1:4,19:23:42.14:690,42,0	0/0:25,0:25:48.16:0,48,1097	1/1:6,21:28:51.17:838,51,0	1/1:8,11:19:24.08:394,24,0	1/1:4,7:11:12.04:197,12,0	1/1:4,10:13:30.08:455,30,0	1/1:6,21:27:36.12:591,36,0	1/1:7,36:43:78.27:1281,78,0	1/1:6,13:19:24.08:394,24,0	1/1:3,14:17:27.08:443,27,0	1/1:4,12:16:18.06:296,18,0	1/1:6,11:16:18.06:296,18,0	1/1:8,13:21:39.02:601,39,0	1/1:15,22:37:45.15:739,45,0	1/1:1,14:15:30.10:493,30,0
chr10	30778163	.	CTGTGTGTGTGTGTGTG	C	8090.02	PASS	AB=0.803;AC=31;AF=0.554;AN=56;BaseQRankSum=5.029;DP=713;FS=2.605;HRun=0;HaplotypeScore=254.8810;InbreedingCoeff=0.5280;MQ=58.89;MQ0=47;MQRankSum=-4.082;QD=18.95;ReadPosRankSum=1.827;VQSLOD=3.0997;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:20:5.98:106,6,0	0/0:9,0:9:15.05:0,15,446	0/0:48,0:21:6.02:0,6,76	0/0:51,0:28:8.87:0,9,114	1/1:11,9:18:11.99:265,12,0	1/1:14,21:35:21.07:853,21,0	0/1:8,6:14:73.87:74,0,131	0/1:28,5:30:4.14:171,0,4	0/0:14,0:17:20.02:0,20,858	0/0:31,0:30:48.16:0,48,1955	0/0:16,0:15:9.03:0,9,373	1/1:13,12:24:11.26:860,11,0	1/1:10,8:16:12.92:337,13,0	1/1:15,5:17:3.01:132,3,0	0/0:22,0:29:48.16:0,48,1963	1/1:8,9:17:15.01:458,15,0	0/1:19,7:25:88.84:359,0,89	0/1:20,0:14:14.80:71,0,15	0/0:18,0:17:14.54:0,15,512	0/0:15,0:25:13.55:0,14,301	0/0:42,0:37:27.09:0,27,632	1/1:16,16:33:20.90:565,21,0	1/1:9,9:18:5.60:262,6,0	1/1:12,7:18:2.80:22,3,0	1/1:9,16:22:29.75:827,30,0	0/1:13,11:24:99:671,0,309	1/1:13,16:28:37.01:1120,37,0	1/1:11,8:19:29.69:937,30,0
chr10	30785074	.	AGCAAACTCT	A	27931.34	PASS	AB=0.531;AC=41;AF=0.732;AN=56;BaseQRankSum=16.035;DP=581;FS=4.219;HRun=0;HaplotypeScore=204.5896;InbreedingCoeff=0.8984;MQ=71.57;MQ0=0;MQRankSum=-16.708;QD=65.88;ReadPosRankSum=3.641;VQSLOD=4.8568;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,29:33:75.08:2016,75,0	0/0:15,0:15:45.15:0,45,2136	0/0:19,0:19:57.20:0,57,2617	0/0:29,0:29:87.30:0,87,3729	1/1:2,21:23:53.93:1258,54,0	1/1:4,15:19:45.11:1324,45,0	1/1:0,10:10:26.69:853,27,0	1/1:8,21:29:62.81:1945,63,0	0/0:20,0:20:57.20:0,57,2822	0/0:27,0:27:78.27:0,78,3742	0/0:16,0:16:48.16:0,48,2217	1/1:0,14:14:42.10:1227,42,0	1/1:4,17:21:54.18:1639,54,0	1/1:2,13:15:33.11:987,33,0	0/0:31,0:31:90.28:0,90,4040	0/1:3,23:26:76.71:2108,0,77	1/1:3,13:16:27.09:811,27,0	1/1:0,14:14:36.12:1116,36,0	1/1:4,18:22:54.15:1563,54,0	1/1:5,14:19:39.10:1079,39,0	1/1:5,25:30:42.01:1073,42,0	1/1:1,14:15:39.09:1100,39,0	1/1:4,13:17:23.92:645,24,0	1/1:5,19:24:36.08:987,36,0	1/1:0,22:22:60.12:1746,60,0	1/1:1,25:26:75.24:2252,75,0	1/1:2,24:26:63.22:1991,63,0	1/1:0,3:3:8.99:210,9,0
chr10	30785303	.	CAGAA	C	26751	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=4.649;DP=700;FS=16.915;HRun=0;HaplotypeScore=141.2677;InbreedingCoeff=0.9787;MQ=75.21;MQ0=3;MQRankSum=-7.307;QD=43.50;ReadPosRankSum=4.262;VQSLOD=4.6188;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,28:29:63.17:1123,63,0	1/1:2,7:9:23.91:400,24,0	0/0:15,0:15:33.11:0,33,757	0/0:26,0:25:68.92:0,69,1618	1/1:4,23:27:48.16:882,48,0	1/1:1,16:17:42.14:772,42,0	1/1:1,20:21:48.09:881,48,0	1/1:2,33:35:96.32:1708,96,0	1/1:0,31:30:66.23:1212,66,0	1/1:1,34:35:99:1842,102,0	1/1:3,21:24:57.15:993,57,0	1/1:4,14:18:36.12:660,36,0	1/1:0,29:29:78.23:1399,78,0	1/1:2,26:28:66.23:1209,66,0	0/0:44,0:44:99:0,129,3241	1/1:1,21:22:57.20:1048,57,0	1/1:1,23:24:57.20:1047,57,0	1/1:1,14:15:39.13:717,39,0	1/1:4,32:36:93.27:1618,93,0	1/1:1,15:16:39.13:717,39,0	1/1:5,19:24:48.16:883,48,0	1/1:1,32:33:78.27:1433,78,0	1/1:2,21:23:54.19:992,54,0	1/1:0,24:24:51.10:937,51,0	1/1:3,24:27:66.23:1214,66,0	1/1:1,30:31:90.24:1518,90,0	1/1:1,28:29:75.26:1378,75,0	1/1:0,8:6:9.03:166,9,0
chr10	30788670	.	GTAGAC	G	12932.64	PASS	AB=1.000;AC=44;AF=0.786;AN=56;BaseQRankSum=2.021;DP=782;FS=4.588;HRun=0;HaplotypeScore=207.5150;InbreedingCoeff=0.3463;MQ=91.20;MQ0=4;MQRankSum=-5.405;QD=21.77;ReadPosRankSum=2.610;VQSLOD=4.5369;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:22:36.07:567,36,0	0/1:11,0:11:31.95:109,0,32	0/0:52,0:36:17.34:0,17,150	0/0:93,0:63:32.23:0,32,395	1/1:43,0:43:84.50:1149,85,0	1/1:38,0:38:90.17:1382,90,0	1/1:29,0:29:42.03:483,42,0	1/1:38,0:38:66:579,66,0	1/1:4,25:29:42.14:787,42,0	0/1:29,0:29:99:224,0,179	0/1:14,0:14:62.83:63,0,144	1/1:18,0:18:48.05:671,48,0	1/1:22,0:22:48.06:657,48,0	1/1:21,0:21:57.13:889,57,0	0/0:37,0:37:90.17:0,90,1966	1/1:14,12:26:30.10:537,30,0	1/1:12,0:12:5.94:42,6,0	1/1:12,0:12:20.89:261,21,0	0/1:30,0:30:69.35:69,0,611	0/1:32,0:32:99:117,0,866	0/1:24,0:24:99:199,0,305	1/1:22,0:22:48.05:655,48,0	1/1:21,0:21:36.01:440,36,0	1/1:22,0:21:23.98:255,24,0	1/1:12,0:12:27.08:449,27,0	1/1:26,0:26:57.11:856,57,0	1/1:31,0:31:72.12:1084,72,0	1/1:10,0:10:27.03:407,27,0
chr10	30788686	.	TAG	T	1872.29	PASS	AB=0.760;AC=17;AF=0.304;AN=56;BaseQRankSum=13.194;DP=813;FS=2.315;HRun=0;HaplotypeScore=222.3018;InbreedingCoeff=-0.2506;MQ=88.94;MQ0=7;MQRankSum=-11.203;QD=4.91;ReadPosRankSum=12.002;VQSLOD=0.8646;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:15,8:23:55.85:134,0,56	0/0:8,0:8:17.72:0,18,185	0/0:60,0:36:88.07:0,88,1209	0/0:119,0:77:99:0,161,2308	0/1:20,19:39:99:169,0,143	0/1:22,16:38:99:306,0,99	0/1:14,5:19:51.82:52,0,69	0/0:38,0:38:66.79:0,67,421	0/1:27,0:27:54.90:64,0,55	0/0:26,0:26:74.75:0,75,997	0/0:21,0:21:32.91:0,33,506	0/1:14,8:22:93.53:108,0,94	0/1:13,6:19:22.92:108,0,23	0/1:10,14:24:98.11:167,0,98	0/0:37,0:37:99:0,108,2015	0/1:20,9:29:98.05:98,0,145	0/0:7,1:8:8.47:0,8,61	0/1:14,2:16:24.73:25,0,174	0/0:32,0:31:81.09:0,81,1202	0/0:32,0:32:96.18:0,96,1446	0/0:24,0:24:69.04:0,69,862	0/1:16,8:24:84.53:85,0,184	0/1:17,5:22:44.30:44,0,197	0/0:22,4:25:6.14:0,6,174	1/1:6,5:10:17.95:141,18,0	0/1:15,8:23:69.63:219,0,70	0/1:17,16:34:99:211,0,142	0/1:7,4:11:4.55:107,0,5
chr10	30788690	.	CTAG	C	3956.13	PASS	AB=0.796;AC=22;AF=0.393;AN=56;BaseQRankSum=11.593;DP=828;FS=11.694;HRun=0;HaplotypeScore=233.6658;InbreedingCoeff=-0.2015;MQ=88.66;MQ0=7;MQRankSum=-11.421;QD=8.53;ReadPosRankSum=9.820;VQSLOD=1.0833;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:15,8:23:17.85:220,0,18	0/0:8,0:8:17.01:0,17,186	0/0:58,0:35:89.17:0,89,1138	0/0:122,1:81:96.65:0,97,2234	0/1:23,18:42:47.27:350,0,47	0/1:22,16:38:15.21:546,0,15	0/1:15,5:20:24.69:114,0,25	0/1:39,0:39:56.98:57,0,203	0/1:28,0:28:81.90:122,0,82	0/0:27,0:27:76.70:0,77,1047	0/0:23,0:23:29.47:0,29,515	0/1:15,8:23:41.73:243,0,42	1/1:13,6:19:8.29:226,8,0	0/1:12,14:26:36.74:321,0,37	0/0:35,0:35:99:0,105,2379	0/1:19,9:28:97.43:187,0,97	0/1:8,1:9:8.96:9,0,51	0/1:12,2:14:63.67:64,0,137	0/0:31,0:30:66.03:0,66,929	0/0:34,0:34:99:0,102,1168	0/0:25,0:25:70.43:0,70,692	0/1:17,8:25:99:195,0,130	0/1:17,5:22:99:116,0,112	0/1:24,4:27:29.21:29,0,131	1/1:5,4:9:24.89:223,25,0	0/1:18,8:26:53.45:372,0,53	0/1:17,16:33:55.32:377,0,55	1/1:7,4:11:19.86:186,20,0
chr10	30788693	.	GACTAC	G	6444.11	PASS	AB=0.998;AC=25;AF=0.446;AN=56;BaseQRankSum=13.384;DP=824;FS=0.731;HRun=0;HaplotypeScore=251.0983;InbreedingCoeff=-0.1552;MQ=87.63;MQ0=8;MQRankSum=-10.744;QD=13.54;ReadPosRankSum=11.379;VQSLOD=1.8968;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:22:14.43:293,0,14	1/1:2,7:9:12.04:219,12,0	0/0:59,0:36:1.28:0,1,176	0/0:118,0:77:3.28:0,3,325	0/1:41,0:42:98.77:523,0,99	0/1:38,0:38:43.45:675,0,43	0/1:19,0:19:28.08:149,0,28	0/0:38,0:38:52.24:0,52,453	0/1:29,0:29:42.86:391,0,43	1/1:9,18:27:53.83:731,54,0	1/1:8,16:24:9.03:168,9,0	0/1:25,0:25:99:292,0,121	0/1:20,0:20:15.08:289,0,15	0/1:26,0:26:65.42:466,0,65	0/0:34,0:34:78.19:0,78,1862	0/1:30,0:30:99:298,0,167	0/0:8,0:8:5.93:0,6,41	0/1:14,0:14:96.94:100,0,97	0/0:32,0:30:69:0,69,1282	0/0:35,0:35:84.12:0,84,1629	0/0:24,0:24:42.01:0,42,694	0/1:24,0:24:99:277,0,103	0/1:21,0:21:99:133,0,144	0/1:27,0:26:52.96:53,0,124	1/1:9,0:9:23.97:263,24,0	0/1:27,0:27:99:344,0,153	0/1:32,0:32:55.32:564,0,55	1/1:10,0:10:17.51:216,18,0
chr10	30788889	.	TC	T	12669.63	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=0.706;DP=633;FS=0.515;HRun=9;HaplotypeScore=80.1002;InbreedingCoeff=0.9710;MQ=77.66;MQ0=0;MQRankSum=-6.275;QD=22.66;ReadPosRankSum=4.377;VQSLOD=5.4212;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,26:26:75.04:686,75,0	1/1:0,6:6:9:82,9,0	0/0:26,0:24:57.61:0,58,585	0/0:25,0:24:26.77:0,27,339	1/1:6,37:43:99:926,102,0	1/1:2,25:27:68.98:623,69,0	1/1:3,18:21:54.03:494,54,0	1/1:8,23:31:64.98:611,65,0	1/1:1,20:21:54.03:494,54,0	1/1:2,21:23:60.02:549,60,0	1/1:1,22:23:60.03:549,60,0	1/1:1,19:20:45.02:412,45,0	1/1:2,18:20:45.02:412,45,0	1/1:0,18:18:51.03:467,51,0	0/0:23,0:23:63.19:0,63,727	1/1:4,23:27:66.03:604,66,0	1/1:2,30:32:78.03:714,78,0	1/1:1,12:13:13.62:273,14,0	1/1:0,10:10:26.99:242,27,0	1/1:2,26:28:71.67:633,72,0	1/1:2,21:23:57.03:522,57,0	1/1:3,25:28:71.98:650,72,0	1/1:2,18:20:51.03:467,51,0	1/1:3,10:13:30.01:275,30,0	1/1:2,16:18:42.02:384,42,0	1/1:1,16:17:50.87:453,51,0	1/1:4,25:29:53.09:600,53,0	1/1:0,22:22:60.03:549,60,0
chr10	30789871	.	C	CT	14253.98	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-7.799;DP=495;FS=3.434;HRun=6;HaplotypeScore=41.7836;InbreedingCoeff=0.9607;MQ=72.90;MQ0=0;MQRankSum=-0.491;QD=31.89;ReadPosRankSum=1.821;VQSLOD=5.1702;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,14:15:42.13:528,42,0	1/1:2,14:16:33.11:415,33,0	0/0:14,0:12:11.80:0,12,181	0/0:11,0:11:13.74:0,14,127	1/1:1,26:27:72.23:899,72,0	1/1:3,20:23:57.15:700,57,0	1/1:0,7:7:12.04:151,12,0	1/1:4,25:28:72.23:902,72,0	1/1:2,18:20:51.16:642,51,0	1/1:0,26:26:78.22:948,78,0	1/1:2,19:21:54.17:675,54,0	1/1:1,10:11:27.09:340,27,0	1/1:2,13:15:36.12:453,36,0	1/1:0,16:16:36.12:453,36,0	0/0:23,0:23:60.12:0,60,605	1/1:4,8:12:21.07:264,21,0	1/1:3,23:26:66.21:830,66,0	1/1:1,8:9:24.08:301,24,0	1/1:1,19:19:54.17:677,54,0	1/1:1,19:20:60.19:750,60,0	1/1:0,8:8:24.08:302,24,0	1/1:2,13:15:42.13:525,42,0	1/1:1,12:13:33.11:415,33,0	1/1:1,9:10:15.05:189,15,0	1/1:2,21:23:57.18:717,57,0	1/1:3,22:25:66.20:817,66,0	1/1:3,24:27:69.22:868,69,0	1/1:0,13:13:39.12:491,39,0
chr10	30793768	.	C	CA	12153.82	PASS	AB=1.000;AC=43;AF=0.768;AN=56;BaseQRankSum=-10.939;DP=614;FS=4.447;HRun=9;HaplotypeScore=59.8815;InbreedingCoeff=0.9260;MQ=76.66;MQ0=0;MQRankSum=-3.378;QD=23.78;ReadPosRankSum=2.635;VQSLOD=5.8792;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,29:32:60.16:664,60,0	1/1:0,4:4:12.03:133,12,0	0/0:22,0:21:24.91:0,25,297	0/1:15,0:15:3.37:3,0,164	1/1:7,24:31:45.94:705,46,0	1/1:5,25:30:66.18:730,66,0	1/1:3,17:20:33.09:365,33,0	1/1:5,23:28:28.07:676,28,0	0/0:13,0:13:35.99:0,36,313	1/1:8,24:32:66.18:730,66,0	1/1:3,16:19:48.13:529,48,0	1/1:6,11:17:39.10:424,39,0	1/1:3,23:26:60.16:664,60,0	1/1:0,20:20:51.14:564,51,0	0/0:27,0:27:62.94:0,63,543	1/1:1,19:20:42.11:465,42,0	1/1:8,19:27:48.13:531,48,0	1/1:5,20:25:31.10:571,31,0	0/0:11,0:11:26.98:0,27,234	0/0:19,0:19:53.99:0,54,469	0/0:11,0:11:32.98:0,33,282	1/1:2,24:27:71.99:764,72,0	1/1:4,21:25:54.14:595,54,0	1/1:2,22:25:66.01:711,66,0	1/1:4,22:26:45.12:498,45,0	1/1:1,16:17:45.12:497,45,0	1/1:7,21:29:81:855,81,0	1/1:2,14:16:44.95:479,45,0
chr10	30795167	.	TA	T	13155.78	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=6.295;DP=604;FS=0.000;HRun=6;HaplotypeScore=59.5416;InbreedingCoeff=0.9991;MQ=82.79;MQ0=0;MQRankSum=-4.701;QD=27.07;ReadPosRankSum=4.028;VQSLOD=5.1110;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,31:39:90.22:967,90,0	1/1:0,8:8:24.06:258,24,0	0/0:18,0:18:39.12:0,39,490	0/0:17,0:16:42.09:0,42,509	1/1:2,20:22:45.11:483,45,0	1/1:3,25:28:69.17:742,69,0	1/1:4,12:16:27.06:290,27,0	1/1:3,34:37:96.22:1022,96,0	1/1:1,21:22:48.12:516,48,0	1/1:1,20:21:60.13:633,60,0	1/1:0,18:18:54.14:580,54,0	1/1:2,13:15:39.10:419,39,0	1/1:0,25:25:63.16:677,63,0	1/1:0,15:15:42.11:451,42,0	0/0:27,0:27:75.24:0,75,973	1/1:3,11:14:33.08:355,33,0	1/1:1,37:38:96.24:1032,96,0	1/1:4,26:30:72.18:774,72,0	0/0:20,0:20:51.16:0,51,658	0/0:19,0:19:51.17:0,51,667	0/0:17,0:17:48.14:0,48,616	1/1:0,14:14:39.10:419,39,0	1/1:0,18:18:54.14:580,54,0	1/1:6,29:35:81.19:871,81,0	1/1:0,21:21:57.14:613,57,0	1/1:2,16:18:48.10:506,48,0	1/1:0,22:22:63.16:677,63,0	1/1:0,10:10:27.07:290,27,0
chr10	30796007	.	T	TA	696.45	PASS	AB=0.958;AC=8;AF=0.143;AN=56;BaseQRankSum=-2.228;DP=355;FS=0.000;HRun=8;HaplotypeScore=51.5100;InbreedingCoeff=0.7675;MQ=77.06;MQ0=1;MQRankSum=-0.357;QD=12.44;ReadPosRankSum=-1.685;VQSLOD=2.1121;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:57.01:0,57,516	0/0:4,0:4:6:0,6,55	0/0:17,0:12:19.54:0,20,162	0/1:15,0:11:0.81:1,0,27	0/0:11,0:11:30.02:0,30,274	0/0:17,0:17:48.03:0,48,439	0/0:15,0:15:33.02:0,33,302	0/0:21,0:21:50.92:0,51,450	0/0:8,0:8:20.88:0,21,179	0/0:17,0:17:48.02:0,48,439	0/1:10,1:11:1.60:2,0,241	0/0:9,0:9:27.01:0,27,247	0/0:9,0:9:24.01:0,24,220	0/0:6,0:6:15.01:0,15,137	0/0:7,0:7:18.01:0,18,164	0/0:11,0:11:30.01:0,30,274	0/0:25,0:25:69.04:0,69,631	0/0:23,0:23:65.96:0,66,588	1/1:7,7:14:27.01:297,27,0	1/1:0,8:8:24.03:262,24,0	1/1:0,8:8:24.07:277,24,0	0/0:8,0:8:21:0,21,187	0/0:11,0:11:30.02:0,30,274	0/0:8,0:8:17.60:0,18,147	0/0:13,0:13:35.99:0,36,322	0/0:13,0:13:30:0,30,274	0/0:16,0:16:29.98:0,30,274	0/0:6,0:6:12:0,12,110
chr10	30796071	.	CA	C	2976.42	PASS	AC=40;AF=0.800;AN=50;BaseQRankSum=-2.036;DP=218;FS=8.497;HRun=8;HaplotypeScore=42.0459;InbreedingCoeff=0.6861;MQ=45.05;MQ0=17;MQRankSum=-0.049;QD=18.49;ReadPosRankSum=1.219;VQSLOD=2.7398;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,10:14:26.98:250,27,0	1/1:2,1:3:3:29,3,0	./.	0/0:15,0:2:3.01:0,3,36	1/1:1,5:5:12.02:116,12,0	1/1:1,5:6:12.02:116,12,0	1/1:0,1:1:3:29,3,0	1/1:5,19:21:56.99:530,57,0	0/0:4,0:4:6.02:0,6,72	1/1:7,7:12:21.03:202,21,0	1/1:2,6:8:15.02:143,15,0	1/1:1,4:5:12.01:116,12,0	1/1:1,2:3:6.01:58,6,0	1/1:0,2:2:5.95:47,6,0	0/0:4,0:4:5.50:0,6,43	1/1:0,5:5:15.02:145,15,0	1/1:6,16:22:22.62:413,23,0	1/1:1,11:12:30.05:289,30,0	0/0:3,0:10:18.64:0,19,66	0/0:1,0:5:10.42:0,10,52	./.	./.	1/1:2,5:7:15.02:145,15,0	1/1:0,4:4:6.01:58,6,0	1/1:1,5:6:15.02:145,15,0	1/1:2,3:5:9.01:87,9,0	1/1:3,6:9:14.59:125,15,0	1/1:2,3:3:9.01:87,9,0
chr10	30796076	.	AAAATAAATAAAT	A	805.48	PASS	AB=1.000;AC=23;AF=0.767;AN=30;BaseQRankSum=1.594;DP=187;FS=2.793;HRun=0;HaplotypeScore=93.6840;InbreedingCoeff=0.1963;MQ=44.89;MQ0=12;MQRankSum=-0.482;QD=8.76;ReadPosRankSum=-1.890;VQSLOD=1.6476;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:0.89:0,1,2	./.	./.	./.	./.	1/1:6,0:6:5.99:62,6,0	./.	0/0:23,0:21:0:0,0,0	./.	./.	1/1:6,0:6:3.01:80,3,0	./.	./.	1/1:2,0:2:3.01:83,3,0	1/1:1,4:5:6.02:202,6,0	1/1:6,0:6:2.99:23,3,0	0/1:22,0:22:10.58:11,0,146	1/1:15,0:15:8.24:81,8,0	0/0:10,0:10:3.01:0,3,82	./.	./.	./.	1/1:5,0:5:2.94:18,3,0	1/1:5,0:5:3.01:42,3,0	./.	1/1:4,0:4:2.22:7,2,0	1/1:10,0:10:13.49:214,13,0	1/1:6,0:4:6:76,6,0
chr10	30796124	.	TAAATAAATAAATAAAA	T	4705.57	PASS	AB=0.971;AC=39;AF=0.750;AN=52;BaseQRankSum=3.002;DP=183;FS=0.939;HRun=0;HaplotypeScore=91.2462;InbreedingCoeff=0.5113;MQ=49.64;MQ0=2;MQRankSum=-0.834;QD=28.87;ReadPosRankSum=2.662;VQSLOD=3.2952;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:12,1:13:26.84:276,27,0	1/1:2,0:2:5.99:50,6,0	0/0:3,0:2:6.02:0,6,74	./.	1/1:7,0:7:20.97:183,21,0	1/1:6,1:7:15:244,15,0	1/1:1,0:1:3:25,3,0	1/1:9,0:8:23.87:185,24,0	0/0:3,0:3:6.02:0,6,186	1/1:6,0:6:17.97:160,18,0	1/1:6,0:6:17.31:226,17,0	1/1:4,0:4:11.98:99,12,0	1/1:3,0:3:9.02:100,9,0	1/1:2,1:3:9.02:240,9,0	0/1:6,0:6:24.94:25,0,44	1/1:7,0:7:17.99:207,18,0	0/1:30,1:33:99:716,0,109	0/1:15,1:16:83.85:561,0,84	0/0:7,0:6:18.03:0,18,255	0/0:4,0:4:12.01:0,12,108	0/0:2,0:2:6:0,6,54	./.	1/1:3,0:3:9:121,9,0	1/1:5,0:5:14.85:107,15,0	1/1:6,0:6:18.01:191,18,0	1/1:4,0:4:9.02:143,9,0	1/1:8,2:10:27.06:639,27,0	1/1:12,0:12:13.52:207,14,0
chr10	30796781	.	AGCCC	A	15632.49	PASS	AB=0.519;AC=35;AF=0.625;AN=56;BaseQRankSum=17.003;DP=496;FS=0.341;HRun=0;HaplotypeScore=159.0582;InbreedingCoeff=0.8964;MQ=69.45;MQ0=0;MQRankSum=-17.354;QD=52.99;ReadPosRankSum=2.666;VQSLOD=5.8156;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,28:30:69.24:1297,69,0	0/0:7,0:7:21.07:0,21,609	0/0:26,0:25:63.89:0,64,1874	0/0:28,0:27:75.12:0,75,1939	1/1:0,15:15:39.13:730,39,0	1/1:0,25:25:75.26:1451,75,0	1/1:0,11:14:38.67:667,39,0	1/1:0,17:17:51.18:1009,51,0	0/0:19,0:19:57.20:0,57,1604	0/0:21,0:21:63.22:0,63,1804	0/0:17,0:17:51.18:0,51,1462	1/1:0,13:13:39.13:757,39,0	1/1:1,15:16:48.13:883,48,0	1/1:0,13:15:45.15:843,45,0	0/0:22,0:22:66.23:0,66,1897	1/1:0,9:9:27.09:526,27,0	1/1:1,15:17:48.08:890,48,0	1/1:1,14:15:2.82:775,3,0	0/0:14,0:14:42.14:0,42,1208	0/0:19,0:19:57.20:0,57,1605	0/0:28,0:28:84.29:0,84,2414	1/1:1,14:15:45.15:849,45,0	1/1:0,12:12:36.12:697,36,0	1/1:2,17:21:45.10:809,45,0	1/1:0,15:15:45.15:883,45,0	0/1:1,13:14:44.85:730,0,45	1/1:1,23:26:78.27:1501,78,0	1/1:1,5:6:18.06:337,18,0
chr10	30796782	.	GCC	G	3797.92	PASS	AB=1.000;AC=35;AF=0.625;AN=56;BaseQRankSum=18.476;DP=501;FS=0.345;HRun=4;HaplotypeScore=182.9324;InbreedingCoeff=0.9231;MQ=70.23;MQ0=0;MQRankSum=-17.312;QD=12.87;ReadPosRankSum=2.980;VQSLOD=-0.0020;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:30:60.54:294,61,0	0/0:7,0:7:21.07:0,21,393	0/0:27,0:26:59.73:0,60,1292	0/0:27,0:27:72.14:0,72,1237	1/1:15,0:15:34.09:170,34,0	1/1:25,0:25:71.02:349,71,0	1/1:13,0:13:31.14:152,31,0	1/1:17,0:17:48.29:237,48,0	0/0:19,0:19:54.19:0,54,1007	0/0:21,0:21:63.20:0,63,1118	0/0:18,0:18:54.19:0,54,994	1/1:14,0:13:36.93:181,37,0	1/1:16,0:16:42.61:210,43,0	1/1:13,2:15:42.94:240,43,0	0/0:22,0:22:66.23:0,66,1223	1/1:9,0:9:25.60:126,26,0	1/1:16,1:17:42.74:225,43,0	1/1:15,0:15:39.90:202,40,0	0/0:17,0:17:51.17:0,51,931	0/0:19,0:19:57.15:0,57,1032	0/0:28,0:28:84.28:0,84,1534	1/1:15,0:15:42.78:228,43,0	1/1:12,0:12:34.09:169,34,0	1/1:19,2:21:37.92:205,38,0	1/1:15,0:15:42.61:207,43,0	0/1:14,0:14:16.25:142,0,16	1/1:25,1:26:72.11:372,72,0	1/1:6,0:6:17.15:88,17,0
chr10	30796787	.	TC	T	9279.75	PASS	AB=0.536;AC=35;AF=0.625;AN=56;BaseQRankSum=18.338;DP=514;FS=0.338;HRun=4;HaplotypeScore=154.5786;InbreedingCoeff=0.9474;MQ=67.73;MQ0=1;MQRankSum=-17.683;QD=31.67;ReadPosRankSum=3.662;VQSLOD=3.2424;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,28:29:72.09:788,72,0	0/0:8,0:8:21.07:0,21,336	0/0:27,0:24:71.60:0,72,1051	0/0:30,0:27:72.93:0,73,1066	1/1:1,15:16:39.10:431,39,0	1/1:0,25:25:75.21:853,75,0	1/1:0,11:11:33.09:375,33,0	1/1:0,18:18:54.16:640,54,0	0/0:20,0:20:60.20:0,60,951	0/0:23,0:23:69.22:0,69,1058	0/0:18,0:18:54.18:0,54,863	1/1:0,14:13:39.11:446,39,0	1/1:1,15:16:48.12:529,48,0	1/1:1,13:14:42.12:471,42,0	0/0:24,0:24:72.25:0,72,1147	1/1:0,9:9:27.08:311,27,0	1/1:1,16:17:45.13:517,45,0	1/1:1,14:15:44.87:520,45,0	0/0:18,0:18:54.18:0,54,842	0/0:23,0:23:66.22:0,66,1034	0/0:30,0:30:87.28:0,87,1360	1/1:0,16:16:45.07:495,45,0	1/1:0,12:12:36.10:410,36,0	1/1:3,17:20:42.58:467,43,0	1/1:0,15:15:45.13:524,45,0	0/1:2,13:15:2.87:440,0,3	1/1:1,23:25:74.89:849,75,0	1/1:0,6:6:18.05:213,18,0
chr10	30798117	.	AGAT	A	389.63	PASS	AB=0.990;AC=13;AF=0.232;AN=56;BaseQRankSum=5.122;DP=573;FS=32.167;HRun=0;HaplotypeScore=177.1811;InbreedingCoeff=-0.1421;MQ=86.95;MQ0=0;MQRankSum=-6.267;QD=1.96;ReadPosRankSum=-4.123;VQSLOD=0.0785;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:27:37.32:48,0,37	0/0:19,0:19:57.20:0,57,1348	0/0:23,0:23:69.22:0,69,1464	0/0:25,0:25:69.24:0,69,1598	0/0:11,0:11:12.60:0,13,38	0/1:13,0:13:13.31:28,0,13	0/1:12,0:12:4.88:91,0,5	0/1:25,0:25:10.42:13,0,10	0/0:35,0:35:99:0,105,2401	0/0:23,0:23:69.24:0,69,1554	0/0:25,0:25:72.25:0,72,1620	0/1:20,0:20:13.08:13,0,49	0/1:17,0:17:28.36:51,0,28	0/1:18,0:18:20.28:105,0,20	0/0:46,0:46:99:0,135,3088	0/1:14,0:14:20.99:35,0,21	0/0:8,0:8:6.21:0,6,14	1/1:6,0:6:0.49:2,0,0	0/0:21,0:21:63.21:0,63,1316	0/0:38,0:38:99:0,114,2624	0/0:52,0:52:99:0,154,3585	0/1:13,0:13:21.40:33,0,21	0/0:16,2:18:24.53:0,25,69	0/0:10,0:11:13.06:0,13,49	0/0:14,0:14:17.23:0,17,52	0/1:22,3:25:68.49:85,0,68	0/1:9,0:9:29.16:29,0,65	0/0:5,0:5:3.43:0,3,20
chr10	30798118	.	G	GC	5321.14	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=18.571;DP=543;FS=26.068;HRun=0;HaplotypeScore=138.9918;InbreedingCoeff=0.9854;MQ=88.97;MQ0=0;MQRankSum=-17.450;QD=22.55;ReadPosRankSum=0.248;VQSLOD=3.3262;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,19:25:58.89:509,59,0	0/0:19,0:19:57.19:0,57,797	0/0:24,0:24:69.20:0,69,925	0/0:23,0:24:69.23:0,69,950	1/1:0,11:11:20.61:175,21,0	1/1:1,11:12:36:329,36,0	1/1:3,8:11:28.75:231,29,0	1/1:4,13:17:51.08:507,51,0	0/0:35,0:35:99:0,105,1432	0/0:23,0:23:69.22:0,69,938	0/0:25,0:25:72.20:0,72,969	1/1:2,15:17:50.22:431,50,0	1/1:3,13:16:36.03:315,36,0	1/1:3,14:17:47.07:415,47,0	0/0:45,0:45:99:0,135,1885	1/1:2,13:15:35.41:317,35,0	1/1:1,7:8:21.02:204,21,0	1/1:0,5:5:15.03:150,15,0	0/0:21,0:21:63.18:0,63,834	0/0:39,0:39:99:0,114,1591	0/0:52,0:52:99:0,154,2139	1/1:3,7:11:23.55:188,24,0	1/1:2,15:17:44.63:392,45,0	1/1:0,6:7:17.55:135,18,0	1/1:0,13:13:35.23:300,35,0	1/1:6,15:21:11.61:456,12,0	1/1:4,4:8:16.42:132,16,0	1/1:1,4:5:14.98:136,15,0
chr10	30798119	.	A	AGCC	6122.86	PASS	AB=0.571;AC=35;AF=0.625;AN=56;BaseQRankSum=18.535;DP=545;FS=34.750;HRun=0;HaplotypeScore=153.8823;InbreedingCoeff=0.9258;MQ=90.13;MQ0=0;MQRankSum=-17.211;QD=26.39;ReadPosRankSum=1.650;VQSLOD=3.2222;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,19:23:50.92:556,51,0	0/0:19,0:19:57.20:0,57,1063	0/0:25,0:25:72.17:0,72,1249	0/0:25,0:25:69.21:0,69,1252	1/1:0,11:11:18.05:195,18,0	1/1:1,11:12:36.08:400,36,0	1/1:2,8:10:23.87:237,24,0	1/1:4,13:17:43.54:525,44,0	0/0:36,0:36:99:0,102,1894	0/0:23,0:23:69.24:0,69,1261	0/0:26,0:26:72.24:0,72,1294	1/1:3,15:18:46.28:502,46,0	1/1:3,12:16:35.77:414,36,0	1/1:3,14:17:45.03:485,45,0	0/0:46,0:46:99:0,135,2424	1/1:1,13:14:35.90:385,36,0	1/1:0,7:7:18.05:206,18,0	1/1:0,5:5:15.05:187,15,0	0/0:21,0:21:63.22:0,63,1161	0/0:40,0:40:99:0,117,2137	0/0:52,0:52:99:0,156,2844	1/1:3,7:11:21.05:239,21,0	1/1:2,15:17:42.11:456,42,0	1/1:2,6:8:14.58:141,15,0	1/1:0,13:13:30.08:340,30,0	0/1:5,15:20:2.78:543,0,3	1/1:4,4:8:21.76:174,22,0	1/1:1,4:5:5.94:138,6,0
chr10	30798120	.	T	TA	6415.07	PASS	AB=0.733;AC=35;AF=0.625;AN=56;BaseQRankSum=19.651;DP=606;FS=53.186;HRun=1;HaplotypeScore=166.1322;InbreedingCoeff=0.8877;MQ=84.70;MQ0=0;MQRankSum=-19.225;QD=21.53;ReadPosRankSum=-0.576;VQSLOD=0.9207;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,19:30:58.01:610,58,0	0/0:19,0:19:57.19:0,57,796	0/0:24,0:24:69.23:0,69,951	0/0:24,0:24:69.20:0,69,943	1/1:3,11:14:20.61:172,21,0	1/1:2,11:13:39.05:388,39,0	1/1:5,8:13:33:310,33,0	1/1:10,13:23:46.30:599,46,0	0/0:36,0:36:99:0,108,1474	0/0:24,0:24:69.22:0,69,948	0/0:25,0:25:72.23:0,72,990	1/1:9,15:24:45.77:542,46,0	1/1:4,13:17:32.44:333,32,0	1/1:7,14:21:38.33:440,38,0	0/0:43,0:43:99:0,129,1787	1/1:7,13:20:48.05:456,48,0	1/1:5,7:12:27.03:253,27,0	1/1:1,5:6:18.03:178,18,0	0/0:21,0:21:63.21:0,63,881	0/0:41,0:41:99:0,117,1618	0/0:51,0:51:99:0,154,2138	1/1:6,7:13:26.63:252,27,0	1/1:7,15:22:47.63:424,48,0	1/1:7,6:13:29.10:245,29,0	1/1:4,13:17:41.23:368,41,0	1/1:8,15:22:11.34:552,11,0	0/1:7,4:11:30.41:163,0,30	1/1:2,4:6:1.96:131,2,0
chr10	30798225	.	C	CCT	14074.47	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=13.077;DP=651;FS=3.554;HRun=0;HaplotypeScore=136.0433;InbreedingCoeff=0.9903;MQ=84.93;MQ0=0;MQRankSum=-13.244;QD=41.03;ReadPosRankSum=0.009;VQSLOD=5.8216;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,15:23:45.15:704,45,0	0/0:9,0:9:24.08:0,24,325	0/0:21,0:21:45.12:0,45,580	0/0:34,0:34:37.88:0,38,676	1/1:5,18:23:48.16:832,48,0	1/1:1,16:17:48.16:824,48,0	1/1:1,12:13:39.13:669,39,0	1/1:9,24:33:78.26:1328,78,0	0/0:37,0:37:99:0,102,1349	0/0:42,0:41:99:0,120,1603	0/0:19,0:19:57.15:0,57,733	1/1:0,11:11:24.08:420,24,0	1/1:3,16:19:48.16:823,48,0	1/1:2,15:17:33.11:577,33,0	0/0:37,0:37:99:0,105,1404	1/1:2,8:10:27.09:468,27,0	1/1:1,12:13:27.09:472,27,0	1/1:0,3:3:9.03:158,9,0	0/0:29,0:29:75.22:0,75,993	0/0:27,0:27:72.24:0,72,973	0/0:53,0:53:99:0,138,1748	1/1:2,27:29:69.23:1176,69,0	1/1:3,19:22:54.17:917,54,0	1/1:2,10:12:27.09:472,27,0	1/1:2,23:25:54.18:913,54,0	1/1:6,24:30:78.27:1334,78,0	1/1:4,23:27:75.24:1255,75,0	1/1:5,11:16:45.13:732,45,0
chr10	30798253	.	A	AGGTTTAT	20869.67	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=12.167;DP=633;FS=2.300;HRun=0;HaplotypeScore=163.7651;InbreedingCoeff=0.9776;MQ=87.01;MQ0=0;MQRankSum=-16.933;QD=63.63;ReadPosRankSum=-2.001;VQSLOD=4.6707;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,9:19:27.09:1053,27,0	0/0:13,0:13:36.10:0,36,830	0/0:25,0:25:63.19:0,63,1456	0/0:31,0:31:81.12:0,81,1686	1/1:4,19:27:57.18:2112,57,0	1/1:7,7:14:32.98:956,33,0	1/1:12,7:19:42.11:1355,42,0	1/1:26,10:36:80.96:1941,81,0	0/0:37,0:37:99:0,105,2516	0/0:46,0:45:99:0,132,3085	0/0:25,0:25:66.21:0,66,1539	1/1:11,2:13:26.94:632,27,0	1/1:14,6:20:32.91:846,33,0	1/1:8,5:13:27.04:772,27,0	0/0:39,0:39:99:0,117,2740	1/1:2,7:11:18.06:702,18,0	1/1:7,1:8:14.97:391,15,0	1/1:0,2:4:6.02:234,6,0	0/0:23,0:23:63.21:0,63,1536	0/0:24,0:24:69.24:0,69,1730	0/0:42,0:42:99:0,114,2712	1/1:15,16:31:60.16:1979,60,0	1/1:6,12:21:27.09:973,27,0	1/1:6,5:11:14.97:484,15,0	1/1:2,25:30:69.16:2502,69,0	1/1:10,9:19:51.06:1523,51,0	1/1:5,12:24:45.13:1571,45,0	1/1:1,7:8:24.06:843,24,0
chr10	30798913	.	TTGTTTCC	T	18810.73	PASS	AB=0.538;AC=35;AF=0.625;AN=56;BaseQRankSum=18.064;DP=588;FS=0.696;HRun=0;HaplotypeScore=180.5181;InbreedingCoeff=0.9139;MQ=75.42;MQ0=0;MQRankSum=-18.293;QD=54.52;ReadPosRankSum=-0.162;VQSLOD=4.6169;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,14:17:42.14:1048,42,0	0/0:7,0:7:21.07:0,21,812	0/0:26,0:26:54.17:0,54,1673	0/0:12,0:12:30.07:0,30,1014	1/1:5,21:25:54.19:1315,54,0	1/1:2,23:25:69.24:1702,69,0	1/1:8,14:22:42.14:1012,42,0	1/1:8,13:21:39.12:894,39,0	0/0:27,0:27:72.25:0,72,2787	0/0:28,0:28:84.29:0,84,3199	0/0:31,0:31:93.32:0,93,3625	1/1:2,18:20:51.18:1273,51,0	1/1:1,19:20:57.20:1412,57,0	1/1:1,21:22:51.18:1273,51,0	0/0:20,0:20:60.21:0,60,2333	1/1:1,15:16:42.14:1048,42,0	1/1:0,12:12:24.08:599,24,0	1/1:1,5:6:12.04:299,12,0	0/0:29,0:29:78.27:0,78,2982	0/0:37,0:37:99:0,105,3908	0/0:26,0:26:75.26:0,75,2908	1/1:6,18:24:51.18:1262,51,0	1/1:6,16:22:42.10:982,42,0	1/1:3,15:18:33.11:823,33,0	1/1:3,18:21:51.18:1269,51,0	0/1:4,24:28:47.76:1571,0,48	1/1:9,12:21:30.10:729,30,0	1/1:0,4:4:12.04:299,12,0
chr10	30799860	.	G	GA	12929.62	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=9.014;DP=596;FS=2.632;HRun=7;HaplotypeScore=87.9195;InbreedingCoeff=0.9610;MQ=88.60;MQ0=0;MQRankSum=-4.460;QD=29.59;ReadPosRankSum=3.586;VQSLOD=5.0864;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,25:26:57.09:656,57,0	0/0:8,0:8:18:0,18,166	0/0:35,0:35:30.54:0,31,622	0/0:15,0:15:36.02:0,36,336	1/1:5,19:24:63.19:750,63,0	1/1:3,12:15:39.12:470,39,0	1/1:1,15:17:39.12:471,39,0	1/1:6,25:31:75.22:894,75,0	0/0:23,0:23:60.09:0,60,579	0/0:29,0:29:75.10:0,75,717	0/0:23,0:23:63.10:0,63,608	1/1:1,17:18:42.13:507,42,0	1/1:5,24:29:69.21:834,69,0	1/1:4,14:18:42.13:504,42,0	0/0:25,0:25:75.12:0,75,724	1/1:0,17:17:48.15:580,48,0	1/1:3,25:28:69.21:834,69,0	1/1:1,14:15:42.13:507,42,0	1/1:2,20:22:60.17:712,60,0	1/1:4,34:38:93.24:1104,93,0	1/1:1,8:9:21.06:254,21,0	1/1:4,22:26:63.15:745,63,0	1/1:2,12:14:33.10:399,33,0	1/1:1,6:7:18.06:217,18,0	1/1:2,17:19:48.15:580,48,0	1/1:2,18:20:2.20:572,2,0	1/1:1,22:23:63.19:761,63,0	1/1:5,16:21:48.15:580,48,0
chr10	30800064	.	GAC	G	12955.32	PASS	AB=0.581;AC=34;AF=0.607;AN=56;BaseQRankSum=17.834;DP=678;FS=4.745;HRun=0;HaplotypeScore=144.3200;InbreedingCoeff=0.8712;MQ=75.69;MQ0=0;MQRankSum=-5.523;QD=30.27;ReadPosRankSum=3.127;VQSLOD=6.8248;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,23:25:48.16:639,48,0	0/0:11,0:11:30.10:0,30,515	0/0:21,0:21:39.59:0,40,621	0/0:27,0:25:65.80:0,66,1015	1/1:2,29:31:63.21:839,63,0	1/1:1,13:14:30.10:399,30,0	1/1:1,22:23:57.19:759,57,0	1/1:11,24:35:75.17:979,75,0	0/0:31,0:31:90.31:0,90,1553	0/0:23,0:23:66.22:0,66,1119	0/0:24,0:24:69.22:0,69,1168	1/1:0,21:21:60.20:799,60,0	1/1:0,29:29:78.26:1038,78,0	1/1:2,16:18:42.14:559,42,0	0/0:29,0:29:81.26:0,81,1365	1/1:3,28:31:69.23:919,69,0	1/1:0,20:20:44.59:598,45,0	0/1:4,10:14:3.88:313,0,4	0/0:19,0:19:45.15:0,45,777	0/0:38,0:38:99:0,108,1847	0/0:27,0:27:72.25:0,72,1242	1/1:2,19:21:53.91:691,54,0	1/1:2,16:18:45.15:599,45,0	1/1:1,27:28:66.22:879,66,0	1/1:0,18:18:48.16:639,48,0	0/1:7,19:26:99:671,0,139	1/1:4,28:32:69.23:919,69,0	1/1:1,23:24:54.18:719,54,0
chr10	30800847	.	A	AT	203.93	PASS	AB=0.667;AC=13;AF=0.382;AN=34;BaseQRankSum=2.712;DP=248;FS=1.223;HRun=0;HaplotypeScore=52.2822;InbreedingCoeff=0.6165;MQ=74.87;MQ0=12;MQRankSum=0.275;QD=14.57;ReadPosRankSum=-4.327;VQSLOD=3.1321;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/0:15,0:15:42.04:0,42,506	0/0:18,0:13:36.12:0,36,490	0/0:20,0:15:25.60:0,26,374	./.	./.	./.	1/1:2,0:2:3.01:47,3,0	0/0:27,0:26:69.14:0,69,903	0/0:27,0:26:78.26:0,78,1087	0/0:22,0:22:66.22:0,66,922	1/1:1,0:1:3:25,3,0	./.	./.	0/0:29,0:29:78.26:0,78,1090	1/1:0,1:1:3.01:47,3,0	./.	./.	0/0:21,0:18:54.18:0,54,755	0/0:27,0:27:78.26:0,78,1090	0/0:22,0:22:60.20:0,60,838	./.	1/1:0,3:3:2.97:20,3,0	./.	1/1:2,0:2:6.02:91,6,0	0/1:2,2:4:60.14:60,0,72	./.	1/1:1,0:1:3.01:42,3,0
chr10	30802105	.	G	GA	1107.58	PASS	AC=12;AF=0.600;AN=20;BaseQRankSum=0.517;DP=108;FS=4.925;HRun=9;HaplotypeScore=54.2502;InbreedingCoeff=0.8916;MQ=78.65;MQ0=3;MQRankSum=-2.832;QD=14.77;ReadPosRankSum=1.992;VQSLOD=3.6867;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	1/1:0,5:5:15.04:166,15,0	0/0:10,0:9:26.97:0,27,229	0/0:5,0:5:7.46:0,7,54	./.	./.	./.	./.	0/0:9,0:9:24:0,24,208	1/1:3,11:14:33.07:355,33,0	1/1:1,11:13:4.03:273,4,0	./.	./.	./.	0/0:5,0:5:15:0,15,130	./.	./.	./.	1/1:12,0:12:18.64:110,19,0	1/1:22,0:21:49.53:223,50,0	1/1:9,0:9:21.96:98,22,0	./.	./.	./.	./.	./.	./.	./.
chr10	30802111	.	A	AAAG	2520.43	PASS	AC=6;AF=0.214;AN=28;BaseQRankSum=-6.455;DP=137;FS=8.726;HRun=0;HaplotypeScore=37.1593;InbreedingCoeff=0.7703;MQ=77.68;MQ0=0;MQRankSum=-3.892;QD=45.01;ReadPosRankSum=-0.490;VQSLOD=4.2181;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	0/0:6,0:6:15.98:0,16,78	0/0:12,0:11:26.27:0,26,419	0/0:6,0:6:10.53:0,11,95	0/0:1,0:1:0:0,0,0	./.	0/0:1,0:1:0:0,0,0	./.	0/0:9,0:9:24.08:0,24,385	0/0:16,0:16:37.54:0,38,190	0/0:15,0:15:32.38:0,32,196	./.	./.	./.	0/0:5,0:5:15.05:0,15,240	./.	0/0:1,0:1:0:0,0,0	./.	1/1:0,15:15:45.10:839,45,0	1/1:3,25:29:69.07:1283,69,0	1/1:0,11:12:24.08:511,24,0	./.	./.	./.	./.	./.	./.	0/0:1,0:1:0:0,0,0
chr10	30803010	.	AT	A	9995.37	PASS	AB=0.857;AC=49;AF=0.875;AN=56;BaseQRankSum=2.886;DP=494;FS=0.653;HRun=9;HaplotypeScore=114.2315;InbreedingCoeff=0.5840;MQ=79.54;MQ0=1;MQRankSum=-1.607;QD=21.00;ReadPosRankSum=2.724;VQSLOD=4.3569;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,21:22:60.03:549,60,0	1/1:0,8:8:24.01:220,24,0	0/1:16,0:16:5.85:6,0,226	0/1:23,0:19:11.22:11,0,204	1/1:4,26:30:75.03:686,75,0	1/1:3,19:22:54.03:494,54,0	1/1:1,7:8:21.01:192,21,0	1/1:4,14:18:36:330,36,0	0/0:5,0:5:15.04:0,15,173	1/1:4,24:28:47.51:607,48,0	1/1:3,29:32:75.02:686,75,0	1/1:2,7:9:21:192,21,0	1/1:1,7:8:18.01:165,18,0	1/1:1,7:8:21.01:192,21,0	0/0:12,0:13:32.93:0,33,361	0/1:3,9:12:4.61:217,0,5	1/1:3,18:21:51.03:467,51,0	1/1:1,10:11:30.01:275,30,0	1/1:1,14:15:42.01:380,42,0	1/1:2,30:32:77.64:714,78,0	1/1:1,6:7:18.01:165,18,0	1/1:2,23:25:66.02:604,66,0	1/1:1,20:21:54.03:494,54,0	1/1:1,7:8:21.01:192,21,0	1/1:2,18:20:51.02:467,51,0	1/1:4,21:25:63.02:572,63,0	1/1:1,21:22:63.03:577,63,0	1/1:2,22:24:31.42:542,31,0
chr10	30803636	.	CATAG	C	1320.49	PASS	AB=1.000;AC=19;AF=0.365;AN=52;BaseQRankSum=2.174;DP=536;FS=5.893;HRun=0;HaplotypeScore=166.0297;InbreedingCoeff=0.7301;MQ=67.85;MQ0=3;MQRankSum=-3.454;QD=7.72;ReadPosRankSum=-0.636;VQSLOD=2.0489;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:26.91:0,27,463	1/1:3,0:5:11.75:86,12,0	./.	./.	0/0:23,0:23:25.59:0,26,386	0/0:22,0:22:27.02:0,27,473	1/1:10,0:10:3.01:46,3,0	0/0:36,0:36:1.25:0,1,3	1/1:14,11:25:14.94:228,15,0	1/1:22,0:23:18.03:181,18,0	1/1:10,0:14:17.82:144,18,0	0/1:14,0:14:22.47:22,0,346	0/0:20,0:20:20.08:0,20,305	0/0:13,0:13:8.10:0,8,76	1/1:17,12:29:12.04:183,12,0	1/1:14,4:18:21.07:319,21,0	0/0:22,0:22:23.95:0,24,265	0/0:9,0:9:3.01:0,3,35	1/1:16,1:17:9.03:137,9,0	0/0:21,0:21:16.36:0,16,275	0/0:15,0:15:6.02:0,6,95	0/0:15,0:15:23.57:0,24,440	0/0:11,0:11:18.06:0,18,337	0/0:14,0:14:9.02:0,9,156	1/1:12,4:16:12.03:161,12,0	0/0:21,0:21:29.01:0,29,451	0/0:24,0:24:27.09:0,27,548	0/0:23,0:23:0.47:0,0,221
chr10	30803680	.	GATAGATAGATAGGATAA	G	2309.07	PASS	AB=1.000;AC=12;AF=0.214;AN=56;BaseQRankSum=1.599;DP=528;FS=1.315;HRun=0;HaplotypeScore=339.2095;InbreedingCoeff=0.2905;MQ=57.88;MQ0=21;MQRankSum=-6.967;QD=15.19;ReadPosRankSum=-0.628;VQSLOD=1.2154;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:47.62:0,48,1796	1/1:6,1:7:6.87:411,7,0	0/0:18,0:6:5.23:0,5,188	0/0:25,0:16:36.41:0,36,528	0/0:29,0:26:41.04:0,41,1514	0/0:16,0:15:40.38:0,40,1532	0/1:7,0:6:18.11:18,0,45	0/1:37,0:31:99:271,0,606	0/0:25,0:25:57.20:0,57,1895	1/1:19,2:22:25.73:856,26,0	1/1:11,1:13:7.75:663,8,0	0/0:18,0:18:35.46:0,35,1280	0/0:18,0:18:35.94:0,36,1322	0/0:21,0:21:22.76:0,23,413	0/0:29,0:29:63.22:0,63,2198	0/0:18,0:18:27.39:0,27,529	0/1:21,0:21:85.68:86,0,1232	0/1:6,0:6:80.57:81,0,181	0/1:10,0:8:32.59:33,0,261	0/1:29,0:29:52.73:53,0,1142	0/0:7,0:7:9.03:0,9,391	0/0:17,0:16:32.38:0,32,1182	0/0:21,0:21:38.71:0,39,1109	0/0:9,0:9:13.40:0,13,500	0/0:14,0:14:14.95:0,15,313	0/0:22,0:22:47.66:0,48,2148	0/0:17,0:17:33.65:0,34,1519	0/0:15,0:15:36.73:0,37,1609
chr10	30803691	.	AG	A	385.26	PASS	AB=0.845;AC=6;AF=0.107;AN=56;BaseQRankSum=0.164;DP=532;FS=3.804;HRun=2;HaplotypeScore=254.2216;InbreedingCoeff=-0.0611;MQ=64.72;MQ0=18;MQRankSum=-0.750;QD=3.53;ReadPosRankSum=0.954;VQSLOD=0.2021;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,2:32:22.32:0,22,434	0/0:8,0:8:4.05:0,4,13	0/0:24,0:12:29.76:0,30,322	0/0:36,0:21:37.98:0,38,514	0/0:25,2:25:25.05:0,25,259	0/0:16,0:15:30.04:0,30,380	0/0:7,1:7:10.02:0,10,46	0/1:26,6:28:79.50:80,0,304	0/0:24,0:24:52.05:0,52,623	0/0:23,1:24:25.73:0,26,336	0/0:13,0:13:14.02:0,14,66	0/0:16,0:16:26.18:0,26,296	0/0:18,0:18:31.17:0,31,252	0/0:21,0:21:14.21:0,14,99	0/0:30,0:30:64.57:0,65,833	0/0:18,0:18:32.03:0,32,156	0/1:12,8:21:54.58:237,0,55	0/1:3,1:4:5.74:82,0,6	0/1:10,2:10:35.55:36,0,39	0/1:28,2:30:64.06:64,0,184	0/0:6,0:6:5.95:0,6,85	0/0:16,0:16:25.14:0,25,311	0/0:20,0:20:26.77:0,27,288	0/1:8,1:10:9.48:9,0,75	0/0:11,0:11:9.75:0,10,37	0/0:23,1:24:32.98:0,33,478	0/0:16,0:16:38.71:0,39,449	0/0:15,0:15:38.16:0,38,355
chr10	30803692	.	GGATAA	G	2539.17	PASS	AB=0.952;AC=39;AF=0.696;AN=56;BaseQRankSum=-3.228;DP=530;FS=23.797;HRun=0;HaplotypeScore=271.1282;InbreedingCoeff=0.1466;MQ=65.63;MQ0=17;MQRankSum=-1.038;QD=6.12;ReadPosRankSum=6.430;VQSLOD=1.0247;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:29,3:32:0.09:47,0,0	0/1:8,0:8:2.02:32,0,2	0/0:24,0:12:17.75:0,18,449	0/0:37,0:22:40.85:0,41,694	1/1:27,0:24:2.32:142,2,0	0/1:14,1:15:17.29:37,0,17	1/1:8,0:7:1.27:19,1,0	1/1:33,0:29:29.02:343,29,0	0/0:24,0:24:54.11:0,54,1033	1/1:25,0:25:0.31:146,0,0	1/1:13,0:13:0.67:81,1,0	1/1:14,2:16:1.90:75,2,0	1/1:17,0:17:15.80:151,16,0	0/1:20,1:21:5.88:100,0,6	0/0:30,0:30:66.18:0,66,1369	1/1:18,0:18:0.61:32,1,0	0/1:20,0:20:21.33:53,0,21	0/1:4,0:4:1.41:84,0,1	1/1:11,0:9:17.98:186,18,0	1/1:28,2:30:29.50:426,29,0	1/1:6,0:6:2.02:16,2,0	0/1:14,2:16:5.17:50,0,5	0/1:18,2:20:13.57:27,0,14	1/1:10,0:10:1.20:7,1,0	0/1:11,0:11:4.91:28,0,5	1/1:23,1:24:18.07:304,18,0	0/1:13,2:15:2.72:3,0,4	1/1:15,0:15:24.93:304,25,0
chr10	30803705	.	TA	T	8705.78	PASS	AB=0.639;AC=43;AF=0.768;AN=56;BaseQRankSum=8.541;DP=504;FS=0.964;HRun=2;HaplotypeScore=235.2265;InbreedingCoeff=0.6681;MQ=66.80;MQ0=10;MQRankSum=-8.647;QD=22.73;ReadPosRankSum=-0.163;VQSLOD=4.2332;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,19:30:27.09:476,27,0	1/1:1,8:9:24.07:275,24,0	0/0:21,0:15:21.39:0,21,409	0/0:37,1:25:55.42:0,55,716	1/1:3,21:22:36.70:394,37,0	1/1:3,8:11:29.68:328,30,0	1/1:1,5:5:15.05:180,15,0	1/1:9,21:26:28.16:651,28,0	0/0:24,0:24:60.11:0,60,874	1/1:3,21:24:71.41:828,71,0	1/1:1,13:14:36.10:422,36,0	1/1:5,10:15:12.16:198,12,0	1/1:0,17:17:50.94:585,51,0	1/1:1,20:21:57.10:616,57,0	0/0:32,0:32:87.20:0,87,1236	1/1:5,13:18:11.81:381,12,0	0/1:9,10:19:64.32:214,0,64	0/1:2,2:4:32.56:78,0,33	1/1:7,3:9:15.85:146,16,0	0/1:10,21:31:99:240,0,148	0/0:2,4:6:10.33:0,10,88	1/1:3,9:12:27.07:302,27,0	1/1:3,18:21:49.02:552,49,0	1/1:2,5:7:11.87:118,12,0	1/1:2,10:12:30.09:342,30,0	1/1:3,17:20:56.56:632,57,0	1/1:3,10:12:27.08:322,27,0	1/1:0,15:15:44.41:426,44,0
chr10	30803718	.	T	TA	649.36	PASS	AB=0.558;AC=4;AF=0.071;AN=56;BaseQRankSum=-0.459;DP=508;FS=2.425;HRun=1;HaplotypeScore=286.0938;InbreedingCoeff=0.4167;MQ=62.88;MQ0=0;MQRankSum=-3.065;QD=12.25;ReadPosRankSum=-2.777;VQSLOD=1.6405;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:34.21:0,34,256	0/0:10,0:10:19.58:0,20,122	0/0:18,0:18:41.08:0,41,491	0/0:24,0:21:22.22:0,22,356	0/0:20,0:20:26.29:0,26,167	0/0:11,0:11:23.81:0,24,175	0/0:6,0:5:12.20:0,12,96	0/0:34,0:33:80.11:0,80,754	0/0:24,0:24:66.01:0,66,841	0/0:27,0:27:72.05:0,72,823	0/0:16,0:16:30.05:0,30,190	0/0:13,0:14:22.52:0,23,181	0/0:17,0:17:42.74:0,43,352	0/0:19,0:19:38.10:0,38,180	0/0:32,0:32:90.29:0,90,1169	0/0:21,0:21:35.53:0,36,291	0/0:21,0:21:24.50:0,25,231	0/0:5,0:5:8.91:0,9,76	1/1:3,7:12:29.77:355,30,0	0/1:4,20:33:99:342,0,153	0/1:2,5:7:35.40:67,0,35	0/0:13,0:13:17.35:0,17,68	0/0:20,0:20:38.71:0,39,206	0/0:7,0:7:9.81:0,10,65	0/0:16,0:16:20.55:0,21,93	0/0:19,0:19:52.42:0,52,545	0/0:18,0:17:31.06:0,31,330	0/0:15,0:15:29.52:0,30,324
chr10	30803734	.	CACAT	C	11059.65	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=8.113;DP=438;FS=5.683;HRun=0;HaplotypeScore=220.2159;InbreedingCoeff=0.9260;MQ=49.66;MQ0=0;MQRankSum=-10.148;QD=36.14;ReadPosRankSum=-1.520;VQSLOD=4.1123;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,11:20:38.34:628,38,0	1/1:0,8:8:21.07:339,21,0	0/0:17,0:16:33.37:0,33,879	0/0:9,0:9:18.06:0,18,425	1/1:9,13:22:36.04:578,36,0	1/1:3,9:12:27.09:414,27,0	1/1:1,3:3:6.02:85,6,0	1/1:7,22:29:66.23:1161,66,0	0/0:22,0:22:63.22:0,63,1513	1/1:5,22:27:66.22:1134,66,0	1/1:0,9:9:27.09:390,27,0	1/1:2,7:9:18.06:292,18,0	1/1:7,10:17:36.12:601,36,0	1/1:2,15:17:45.15:734,45,0	0/0:31,0:31:78.27:0,78,1974	1/1:1,18:19:54.18:930,54,0	1/1:8,12:20:16.90:400,17,0	1/1:0,4:4:12.04:194,12,0	0/0:15,0:14:33.73:0,34,992	0/0:28,0:28:60.21:0,60,1335	0/0:10,0:10:15.05:0,15,373	1/1:1,11:12:33.11:517,33,0	1/1:4,16:20:48.15:685,48,0	1/1:3,3:6:3.01:53,3,0	1/1:2,8:10:24.08:399,24,0	1/1:2,13:15:39.13:687,39,0	1/1:2,15:17:39.13:681,39,0	1/1:5,3:8:9.03:156,9,0
chr10	30803855	.	G	GA	10734.69	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=4.001;DP=310;FS=0.000;HRun=1;HaplotypeScore=73.4286;InbreedingCoeff=0.8490;MQ=65.31;MQ0=2;MQRankSum=-2.404;QD=38.20;ReadPosRankSum=0.588;VQSLOD=5.2305;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,20:21:45.14:673,45,0	1/1:0,2:2:6.02:90,6,0	0/0:10,0:9:22.41:0,22,197	0/0:4,0:2:0.47:0,0,1	1/1:0,18:18:51.11:736,51,0	1/1:0,7:8:24.08:328,24,0	1/1:0,9:9:18.04:269,18,0	1/1:3,33:37:99:1504,111,0	0/0:9,0:9:27.09:0,27,378	1/1:1,14:15:42.11:594,42,0	1/1:0,11:11:30.10:450,30,0	1/1:0,4:5:15.05:210,15,0	1/1:0,10:11:33.11:479,33,0	1/1:0,14:14:36.12:538,36,0	0/0:6,0:6:18.06:0,18,252	1/1:0,6:6:18.06:270,18,0	1/1:0,14:15:30.10:438,30,0	1/1:0,9:9:21.07:317,21,0	1/1:3,14:17:48.13:649,48,0	1/1:0,11:11:30.10:450,30,0	1/1:0,3:3:9.03:135,9,0	1/1:1,3:4:9.03:135,9,0	1/1:0,7:7:18.06:271,18,0	1/1:0,4:4:8.98:135,9,0	1/1:0,8:8:18.06:269,18,0	1/1:0,20:20:57.19:851,57,0	1/1:2,10:12:30.08:432,30,0	1/1:3,11:14:36.08:514,36,0
chr10	30803914	.	G	GAT	6047.76	PASS	AB=0.697;AC=35;AF=0.648;AN=54;BaseQRankSum=-6.584;DP=259;FS=3.049;HRun=0;HaplotypeScore=45.9328;InbreedingCoeff=0.4786;MQ=87.01;MQ0=1;MQRankSum=-1.021;QD=29.94;ReadPosRankSum=0.082;VQSLOD=5.9553;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:36.11:0,36,450	1/1:1,2:3:6.02:99,6,0	0/0:9,0:8:3.65:0,4,70	0/1:24,0:20:7.20:7,0,15	0/1:10,9:19:4.44:436,0,4	0/1:1,8:9:13.43:323,0,13	1/1:0,2:2:6.02:99,6,0	1/1:9,26:36:46.70:1221,47,0	0/0:4,0:4:9.02:0,9,100	1/1:2,9:11:27.09:446,27,0	1/1:4,3:7:15.04:220,15,0	1/1:1,1:2:6.01:74,6,0	1/1:3,4:7:12.04:198,12,0	0/1:4,6:9:16.46:276,0,16	0/0:2,0:2:3.01:0,3,38	1/1:4,4:7:9.03:148,9,0	1/1:3,7:10:21.07:346,21,0	1/1:0,4:4:12.04:198,12,0	0/0:12,0:12:33.10:0,33,413	0/0:13,0:13:30.09:0,30,374	0/0:2,0:2:6.02:0,6,75	1/1:0,2:2:6.02:99,6,0	1/1:2,7:9:18.06:297,18,0	./.	1/1:0,6:6:18.06:297,18,0	0/1:6,7:13:7.44:407,0,7	1/1:2,8:9:24.06:370,24,0	1/1:0,10:10:30.10:484,30,0
chr10	30804452	.	T	TACAGACACACACACAC	15492.10	PASS	AB=1.000;AC=49;AF=0.875;AN=56;BaseQRankSum=6.600;DP=590;FS=3.239;HRun=0;HaplotypeScore=281.7594;InbreedingCoeff=0.7113;MQ=42.31;MQ0=17;MQRankSum=-2.679;QD=31.23;ReadPosRankSum=-3.566;VQSLOD=3.3730;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:32,1:33:29.68:784,30,0	1/1:10,0:10:18.03:447,18,0	0/0:30,0:10:29.97:0,30,257	0/0:42,0:14:22.37:0,22,278	1/1:21,0:20:9:93,9,0	1/1:20,0:20:12.01:482,12,0	1/1:22,0:22:47.95:833,48,0	1/1:22,0:22:59.34:667,59,0	0/1:25,0:26:33.90:34,0,1630	1/1:21,0:21:57.69:1502,58,0	1/1:8,11:21:6:435,6,0	1/1:24,0:23:35.22:697,35,0	1/1:21,0:21:33.54:1116,34,0	1/1:14,0:13:27.02:487,27,0	0/0:19,0:22:63.10:0,63,1848	1/1:13,0:13:2.07:619,2,0	1/1:28,0:27:58.76:1440,59,0	1/1:13,0:13:35.85:897,36,0	1/1:14,0:13:31.53:628,32,0	1/1:16,0:15:17.92:150,18,0	1/1:26,0:25:29.94:272,30,0	1/1:17,0:17:20.78:301,21,0	1/1:20,0:19:11.93:100,12,0	1/1:22,0:22:24.32:311,24,0	1/1:18,0:16:15:364,15,0	1/1:26,0:25:70.25:1581,70,0	1/1:23,0:22:44.85:951,45,0	1/1:4,0:4:11.20:302,11,0
chr10	30804513	.	TA	T	5764.66	PASS	AB=0.799;AC=43;AF=0.768;AN=56;BaseQRankSum=1.451;DP=501;FS=2.052;HRun=11;HaplotypeScore=110.8869;InbreedingCoeff=0.6444;MQ=66.23;MQ0=2;MQRankSum=-3.399;QD=14.30;ReadPosRankSum=2.456;VQSLOD=4.9590;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:9,24:33:71.79:590,72,0	0/1:4,1:5:15.62:16,0,53	0/1:21,2:20:12.03:12,0,284	0/0:20,0:15:30.48:0,30,294	1/1:6,15:21:41.90:342,42,0	1/1:7,14:21:6.94:264,7,0	1/1:3,8:11:17.96:147,18,0	1/1:7,23:30:58.19:530,58,0	0/0:12,0:12:21.01:0,21,211	0/0:21,0:21:48.10:0,48,495	0/0:22,1:23:20.44:0,20,411	1/1:5,13:18:32.92:270,33,0	1/1:6,9:15:25.16:201,25,0	1/1:2,12:14:29.94:246,30,0	0/0:21,1:22:20.37:0,20,551	0/1:4,5:9:11.02:127,0,11	1/1:5,16:21:47.93:393,48,0	1/1:2,11:13:26.96:222,27,0	1/1:6,0:16:6.11:48,6,0	1/1:3,0:19:33.35:96,33,0	1/1:4,0:12:2.72:15,3,0	1/1:5,9:14:32.91:265,33,0	1/1:2,12:14:26.96:221,27,0	1/1:2,19:21:44.94:369,45,0	1/1:4,18:22:53.90:443,54,0	1/1:3,21:24:32.66:457,33,0	1/1:6,17:23:50.89:418,51,0	1/1:1,3:4:8.99:74,9,0
chr10	30804551	.	AG	A	1502.29	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=6.696;DP=489;FS=2.870;HRun=1;HaplotypeScore=78.8283;InbreedingCoeff=0.9933;MQ=91.41;MQ0=0;MQRankSum=-4.282;QD=31.30;ReadPosRankSum=-0.090;VQSLOD=3.2862;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:84.29:0,84,1336	0/0:7,0:7:21.07:0,21,336	0/0:22,0:22:66.15:0,66,963	0/0:23,0:23:56.64:0,57,932	0/0:17,0:17:51.17:0,51,807	0/0:18,0:18:45.12:0,45,667	0/0:15,0:15:36.12:0,36,547	0/0:28,0:28:84.26:0,84,1278	0/0:14,0:14:42.13:0,42,644	0/0:23,0:23:60.20:0,60,959	0/0:19,0:19:54.18:0,54,853	0/0:8,0:8:21.05:0,21,305	0/0:10,0:10:27.09:0,27,432	0/0:13,0:13:33.11:0,33,526	0/0:16,0:16:48.15:0,48,741	0/0:9,0:9:27.09:0,27,432	0/0:24,0:24:72.25:0,72,1150	0/0:16,0:16:42.13:0,42,647	1/1:0,13:13:39.05:466,39,0	1/1:9,11:20:57.17:714,57,0	1/1:1,14:15:36.12:466,36,0	0/0:15,0:15:45.15:0,45,719	0/0:15,0:15:42.11:0,42,624	0/0:32,0:32:84.29:0,84,1333	0/0:17,0:17:51.17:0,51,812	0/0:23,0:23:69.24:0,69,1102	0/0:21,0:21:63.21:0,63,1006	0/0:6,0:6:18.06:0,18,278
chr10	30804552	.	GA	G	1504.10	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=6.597;DP=499;FS=3.862;HRun=1;HaplotypeScore=80.5348;InbreedingCoeff=0.9919;MQ=91.51;MQ0=0;MQRankSum=-4.685;QD=30.08;ReadPosRankSum=0.205;VQSLOD=3.3206;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:84.23:0,84,1281	0/0:7,0:7:21.07:0,21,328	0/0:22,0:22:65.43:0,65,955	0/0:24,0:24:63.13:0,63,904	0/0:18,0:18:54.12:0,54,794	0/0:18,0:18:45.15:0,45,697	0/0:16,0:16:41.99:0,42,551	0/0:27,0:27:81.24:0,81,1166	0/0:14,0:14:42.12:0,42,630	0/0:23,0:23:60.20:0,60,918	0/0:19,0:19:54.18:0,54,838	0/0:8,0:8:18.03:0,18,217	0/0:10,0:10:27.09:0,27,422	0/0:15,0:15:36.10:0,36,527	0/0:16,0:16:45.15:0,45,703	0/0:9,0:9:27.09:0,27,422	0/0:24,0:24:72.25:0,72,1125	0/0:17,0:17:45.11:0,45,672	1/1:14,0:14:39.05:466,39,0	1/1:14,6:20:57.17:715,57,0	1/1:16,0:16:36.12:466,36,0	0/0:17,0:17:45.15:0,45,694	0/0:15,0:15:39.13:0,39,600	0/0:32,0:32:84.27:0,84,1265	0/0:18,0:18:54.15:0,54,796	0/0:24,0:24:69.23:0,69,1060	0/0:21,0:21:63.21:0,63,981	0/0:6,0:6:18.01:0,18,233
chr10	30804884	.	T	TG	6355.25	PASS	AB=1.000;AC=43;AF=0.768;AN=56;BaseQRankSum=5.943;DP=647;FS=6.920;HRun=5;HaplotypeScore=118.7813;InbreedingCoeff=0.5267;MQ=80.06;MQ0=0;MQRankSum=-4.286;QD=11.45;ReadPosRankSum=6.800;VQSLOD=2.0155;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:36,0:36:43.25:318,43,0	0/1:9,0:8:2.80:49,0,3	0/0:21,0:21:17.40:0,17,349	0/0:18,0:18:37.22:0,37,382	1/1:34,0:34:26.32:347,26,0	1/1:25,0:25:52.65:240,53,0	0/1:17,0:17:13.06:129,0,13	1/1:22,0:22:55.12:219,55,0	0/0:19,0:19:57.14:0,57,612	1/1:26,0:26:37.47:267,37,0	1/1:27,0:26:10.16:226,10,0	1/1:25,0:25:30.56:208,31,0	1/1:18,0:18:49.03:232,49,0	1/1:18,0:18:35.91:168,36,0	0/0:34,0:34:96.16:0,96,993	1/1:27,0:27:23.44:233,23,0	1/1:20,0:20:24.65:178,25,0	0/1:14,0:14:7.38:110,0,7	1/1:4,23:26:69.02:790,69,0	1/1:0,27:27:72.03:879,72,0	1/1:3,11:14:27.09:355,27,0	1/1:23,0:23:13.59:144,14,0	0/1:22,0:22:15.25:178,0,15	1/1:28,0:28:17.07:212,17,0	0/1:15,0:15:38.54:65,0,39	1/1:29,0:29:72.49:321,72,0	1/1:34,0:34:30.34:291,30,0	1/1:18,0:18:20.03:195,20,0
chr10	30804889	.	G	GA	15527.75	PASS	AB=1.000;AC=47;AF=0.839;AN=56;BaseQRankSum=-0.347;DP=643;FS=2.628;HRun=6;HaplotypeScore=84.9648;InbreedingCoeff=0.8343;MQ=81.50;MQ0=0;MQRankSum=-4.172;QD=28.28;ReadPosRankSum=4.768;VQSLOD=5.2855;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,36:39:93.30:1173,93,0	1/1:1,7:7:15.05:189,15,0	0/0:24,0:24:29.02:0,29,420	0/0:17,0:17:27.04:0,27,267	1/1:1,33:34:84.18:1022,84,0	1/1:0,22:22:57.18:719,57,0	1/1:2,15:17:14.57:499,15,0	1/1:1,22:23:66.20:817,66,0	0/0:20,0:20:60.11:0,60,599	1/1:1,24:25:72.22:896,72,0	1/1:3,26:28:66.12:788,66,0	1/1:1,23:24:57.18:719,57,0	1/1:0,19:19:54.17:679,54,0	1/1:1,15:16:39.12:489,39,0	0/0:33,0:33:87.17:0,87,880	1/1:2,25:27:72.19:890,72,0	1/1:1,19:20:51.16:643,51,0	1/1:2,12:14:33.11:416,33,0	0/1:26,0:26:18.44:144,0,18	1/1:25,0:25:59.55:311,60,0	1/1:12,0:12:5.31:104,5,0	1/1:2,22:24:53.05:637,53,0	1/1:2,22:24:54.15:681,54,0	1/1:2,22:25:60.19:748,60,0	1/1:2,13:15:30.05:360,30,0	1/1:1,27:28:81.26:1020,81,0	1/1:3,32:35:81.26:1017,81,0	1/1:1,17:18:45.14:567,45,0
chr10	30805136	.	G	GA	8157.46	PASS	AB=0.667;AC=41;AF=0.732;AN=56;BaseQRankSum=2.054;DP=504;FS=5.744;HRun=6;HaplotypeScore=202.6805;InbreedingCoeff=0.9302;MQ=79.10;MQ0=0;MQRankSum=-10.459;QD=22.91;ReadPosRankSum=4.272;VQSLOD=2.5043;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,12:21:39.09:432,39,0	1/1:1,10:11:21.03:201,21,0	0/0:21,0:21:49.97:0,50,461	0/0:27,0:26:69.13:0,69,694	1/1:2,18:20:31.27:325,31,0	1/1:5,14:19:42.03:423,42,0	1/1:1,17:18:33.10:401,33,0	1/1:3,17:20:51.16:641,51,0	0/0:26,0:26:78.18:0,78,796	1/1:2,18:20:54.16:643,54,0	1/1:4,16:20:32.99:322,33,0	1/1:1,15:16:33.02:329,33,0	1/1:0,18:18:48.04:474,48,0	1/1:3,19:22:51.13:584,51,0	0/0:24,0:24:63.14:0,63,643	1/1:4,11:15:15.16:399,15,0	1/1:3,5:8:15.04:173,15,0	0/1:3,3:6:0.09:93,0,0	0/0:11,0:11:27.97:0,28,257	0/0:30,0:30:35.24:0,35,206	0/0:9,0:9:8.45:0,8,46	1/1:3,15:18:42.02:432,42,0	1/1:2,24:26:51.01:499,51,0	1/1:2,16:18:18:183,18,0	1/1:1,11:12:30.01:295,30,0	1/1:3,21:24:66.16:759,66,0	1/1:3,16:19:36.05:396,36,0	1/1:0,5:5:15.03:153,15,0
chr10	30805144	.	G	GGCTATAGACATCCAAATT	91202.27	PASS	AB=0.818;AC=47;AF=0.839;AN=56;BaseQRankSum=2.758;DP=689;FS=5.851;HRun=0;HaplotypeScore=347.0698;InbreedingCoeff=0.8131;MQ=70.03;MQ0=0;MQRankSum=-14.152;QD=155.11;ReadPosRankSum=1.913;VQSLOD=4.0042;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:22,5:27:66.02:2869,66,0	1/1:6,7:12:35.95:2304,36,0	0/0:22,0:22:51.07:0,51,1399	0/0:28,0:27:77.84:0,78,2679	1/1:24,7:31:77.97:4348,78,0	1/1:19,8:27:81.21:5306,81,0	1/1:27,2:29:72.11:3546,72,0	1/1:43,0:43:99:6220,123,0	0/0:29,0:29:84.26:0,84,3891	1/1:27,5:32:93.31:5962,93,0	1/1:21,7:28:71.92:3548,72,0	1/1:11,7:19:51.17:3771,51,0	1/1:15,12:27:78.22:5538,78,0	1/1:13,7:20:57.16:3932,57,0	0/0:22,0:22:63.19:0,63,2839	0/1:14,4:18:59.32:3203,0,59	1/1:11,2:13:30.08:2032,30,0	1/1:6,1:7:2.55:829,3,0	1/1:8,3:18:54.19:3509,54,0	1/1:12,16:45:69.20:5189,69,0	1/1:4,3:14:9.03:785,9,0	1/1:20,7:27:72.03:4240,72,0	1/1:19,13:32:83.96:4561,84,0	1/1:16,3:19:36.11:2270,36,0	1/1:16,7:23:63.07:4163,63,0	1/1:30,8:38:99:7455,108,0	1/1:22,5:27:78.09:3926,78,0	1/1:6,5:11:33.04:1698,33,0
chr10	30805617	.	A	AT	2018.56	PASS	AB=0.935;AC=7;AF=0.125;AN=56;BaseQRankSum=1.701;DP=624;FS=3.730;HRun=7;HaplotypeScore=74.2973;InbreedingCoeff=0.9080;MQ=79.68;MQ0=0;MQRankSum=-0.041;QD=20.19;ReadPosRankSum=0.699;VQSLOD=3.3291;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:99:0,99,955	1/1:2,12:14:38.99:435,39,0	0/0:15,0:15:36.03:0,36,333	0/0:16,0:16:36.04:0,36,335	0/0:29,0:29:78.07:0,78,744	0/0:20,0:20:53.57:0,54,500	0/0:23,0:23:63.10:0,63,608	0/0:35,0:35:99:0,99,942	0/0:28,0:28:75.09:0,75,712	1/1:4,27:31:81.19:946,81,0	1/1:3,22:26:66.16:779,66,0	0/0:20,0:20:57.09:0,57,550	0/0:21,0:21:54.04:0,54,510	0/0:22,0:22:60.08:0,60,573	0/0:20,0:20:51.07:0,51,493	0/0:24,0:24:72.10:0,72,689	0/0:21,0:21:60.07:0,60,572	0/0:10,0:10:27.04:0,27,261	0/0:22,0:22:64.89:0,65,603	0/0:33,0:33:78.09:0,78,749	0/0:29,0:29:78.12:0,78,753	0/0:9,0:9:27.04:0,27,261	0/0:20,0:20:51.08:0,51,491	0/0:24,0:24:63.10:0,63,608	0/0:20,0:20:57.09:0,57,550	0/1:27,2:29:0.39:0,0,557	0/0:21,0:21:63.10:0,63,608	0/0:9,0:9:24.04:0,24,232
chr10	30805704	.	TAG	T	4387.28	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=16.104;DP=662;FS=1.748;HRun=0;HaplotypeScore=121.4940;InbreedingCoeff=0.9992;MQ=85.82;MQ0=0;MQRankSum=-15.964;QD=42.59;ReadPosRankSum=1.101;VQSLOD=6.2003;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:69.24:0,69,1333	1/1:0,13:13:39.13:567,39,0	0/0:26,0:26:70.48:0,70,1286	0/0:21,0:21:62.80:0,63,1083	0/0:44,0:44:99:0,126,2433	0/0:18,0:18:54.19:0,54,1043	0/0:15,0:15:45.15:0,45,869	0/0:37,0:37:99:0,111,2098	0/0:40,0:40:99:0,120,2282	1/1:0,21:22:66.15:938,66,0	1/1:0,24:24:72.24:1025,72,0	0/0:23,0:23:69.22:0,69,1288	0/0:29,0:29:84.29:0,84,1608	0/0:13,0:13:39.13:0,39,754	0/0:29,0:29:87.30:0,87,1668	0/0:20,0:20:57.20:0,57,1089	0/0:17,0:17:51.17:0,51,973	0/0:10,0:10:30.10:0,30,567	1/1:1,9:10:27.09:396,27,0	1/1:0,26:26:78.26:1135,78,0	1/1:0,8:8:24.04:327,24,0	0/0:28,0:28:81.28:0,81,1564	0/0:37,0:37:99:0,105,2028	0/0:16,0:16:48.16:0,48,911	0/0:21,0:21:63.22:0,63,1207	0/0:37,1:38:67.38:0,67,2034	0/0:38,0:36:99:0,114,2201	0/0:14,0:14:42.14:0,42,811
chr10	30805711	.	GT	G	3143.74	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=16.046;DP=667;FS=4.113;HRun=5;HaplotypeScore=112.8980;InbreedingCoeff=0.9932;MQ=86.67;MQ0=0;MQRankSum=-15.341;QD=29.94;ReadPosRankSum=-0.323;VQSLOD=2.8430;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:72.24:0,72,985	1/1:0,13:13:39.11:435,39,0	0/0:27,0:27:75.14:0,75,886	0/0:22,0:22:47.49:0,47,591	0/0:45,0:45:99:0,129,1737	0/0:16,0:16:45.15:0,45,616	0/0:17,0:17:45.14:0,45,599	0/0:39,0:39:99:0,114,1546	0/0:41,0:41:99:0,114,1527	1/1:1,22:23:67.74:745,68,0	1/1:1,24:25:75.16:807,75,0	0/0:22,0:22:60.20:0,60,821	0/0:28,0:28:81.25:0,81,1090	0/0:13,0:13:36.11:0,36,476	0/0:31,0:31:90.28:0,90,1201	0/0:18,0:18:51.17:0,51,698	0/0:18,0:18:51.17:0,51,695	0/0:9,0:9:27.09:0,27,369	1/1:0,9:9:27.08:305,27,0	1/1:0,27:27:81.23:904,81,0	1/1:0,8:8:12.03:134,12,0	0/0:31,0:31:90.30:0,90,1230	0/0:35,0:35:99:0,99,1354	0/0:15,0:15:39.13:0,39,533	0/0:22,0:22:66.22:0,66,903	0/0:34,1:35:68.48:0,68,1291	0/0:37,0:35:99:0,105,1433	0/0:14,0:14:42.14:0,42,573
chr10	30806023	.	CT	C	5506.33	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=18.303;DP=708;FS=4.480;HRun=3;HaplotypeScore=93.6135;InbreedingCoeff=0.9997;MQ=85.25;MQ0=0;MQRankSum=-5.131;QD=33.17;ReadPosRankSum=1.139;VQSLOD=5.1049;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,117,1636	1/1:0,18:18:51.16:631,51,0	0/0:23,0:23:63.16:0,63,826	0/0:25,0:26:51.71:0,52,801	0/0:34,0:34:99:0,99,1425	0/0:20,0:20:60.19:0,60,846	0/0:9,0:9:27.09:0,27,388	0/0:30,0:30:87.29:0,87,1238	0/0:21,0:21:63.21:0,63,906	1/1:0,35:35:99:1295,105,0	1/1:1,23:24:51.16:627,51,0	0/0:20,0:20:60.19:0,60,847	0/0:23,0:23:69.23:0,69,994	0/0:32,0:32:96.32:0,96,1380	0/0:28,0:28:84.27:0,84,1191	0/0:27,0:27:81.26:0,81,1149	0/0:22,0:22:66.22:0,66,951	0/0:11,0:11:33.08:0,33,453	1/1:3,28:31:84.26:1041,84,0	1/1:0,35:35:96.30:1173,96,0	1/1:0,23:23:60.19:739,60,0	0/0:35,0:35:99:0,102,1415	0/0:24,0:24:69.23:0,69,994	0/0:15,0:15:45.15:0,45,647	0/0:27,0:27:78.26:0,78,1124	0/0:32,0:32:96.31:0,96,1366	0/0:27,0:27:81.27:0,81,1164	0/0:16,0:16:48.16:0,48,691
chr10	30807286	.	C	CA	1433.64	PASS	AB=0.847;AC=45;AF=0.804;AN=56;BaseQRankSum=2.910;DP=477;FS=2.564;HRun=15;HaplotypeScore=81.7459;InbreedingCoeff=0.2916;MQ=48.64;MQ0=10;MQRankSum=-3.429;QD=3.26;ReadPosRankSum=-3.396;VQSLOD=-0.1611;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:32,0:33:22.94:120,23,0	1/1:2,1:4:10.04:61,10,0	0/0:5,0:4:7.37:0,7,37	0/1:8,0:6:9.07:11,0,9	1/1:6,0:24:6.27:34,6,0	1/1:3,0:18:8.56:44,9,0	1/1:8,0:15:5.68:28,6,0	1/1:8,1:22:14.60:59,15,0	0/0:9,0:9:17.53:0,18,107	0/1:13,1:19:10.53:135,0,11	1/1:11,2:19:12.11:74,12,0	1/1:14,0:13:2.19:6,2,0	1/1:15,0:14:11.41:54,11,0	1/1:14,0:13:0.63:2,1,0	0/0:20,1:23:0.77:0,1,169	1/1:14,0:13:3.82:14,4,0	1/1:14,0:25:14.43:81,14,0	0/1:14,0:12:9.96:10,0,10	0/1:17,8:24:6.07:168,0,6	1/1:11,8:22:19.93:182,20,0	0/1:9,5:13:0.03:108,0,0	1/1:3,0:16:13.25:65,13,0	1/1:6,0:16:9.41:45,9,0	1/1:13,0:13:7.78:37,8,0	1/1:19,0:17:5.58:52,6,0	1/1:25,0:25:28.78:164,29,0	1/1:18,0:17:5.64:16,6,0	1/1:4,0:1:0.47:1,0,0
chr10	30808080	.	TAA	T	14072.73	PASS	AB=0.857;AC=49;AF=0.875;AN=56;BaseQRankSum=9.077;DP=613;FS=3.158;HRun=11;HaplotypeScore=80.5724;InbreedingCoeff=0.7481;MQ=67.00;MQ0=0;MQRankSum=0.077;QD=25.54;ReadPosRankSum=0.548;VQSLOD=4.9836;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,24:26:66.15:702,66,0	1/1:1,12:13:10.82:326,11,0	0/0:5,0:4:1.25:0,1,3	0/1:5,0:6:17.71:18,0,32	1/1:4,30:34:84.17:894,84,0	1/1:2,20:22:45.10:479,45,0	1/1:5,14:19:42.10:447,42,0	1/1:6,30:36:84.09:862,84,0	0/0:29,0:29:84.24:0,84,1234	1/1:3,26:29:78.18:830,78,0	1/1:3,19:22:48.09:511,48,0	1/1:3,32:35:90.22:958,90,0	1/1:2,20:22:45.11:479,45,0	1/1:0,20:20:57.14:607,57,0	0/0:28,0:28:78.26:0,78,1200	1/1:1,18:19:51.11:543,51,0	1/1:0,26:26:69.17:734,69,0	1/1:0,10:10:21.05:224,21,0	1/1:1,22:23:66.14:690,66,0	1/1:1,24:25:66.13:702,66,0	1/1:2,17:19:48.11:511,48,0	1/1:3,17:21:50.48:519,50,0	1/1:3,25:28:51.11:543,51,0	1/1:2,12:14:33.08:351,33,0	1/1:1,19:20:45.11:479,45,0	1/1:3,23:26:69.15:727,69,0	1/1:3,23:26:71.91:746,72,0	1/1:2,8:10:18.03:192,18,0
chr10	30808766	.	TAA	T	2387.12	PASS	AB=0.719;AC=39;AF=0.696;AN=56;BaseQRankSum=7.131;DP=465;FS=8.267;HRun=17;HaplotypeScore=76.4456;InbreedingCoeff=0.6689;MQ=75.69;MQ0=2;MQRankSum=-0.436;QD=7.08;ReadPosRankSum=7.295;VQSLOD=-0.1423;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:9,10:20:23.83:168,24,0	0/0:6,0:6:12.02:0,12,116	0/0:25,0:15:20.03:0,20,139	0/0:13,0:11:6.48:0,6,61	0/1:16,3:23:1.60:38,0,2	1/1:4,8:16:28.99:184,29,0	1/1:5,5:11:13.18:87,13,0	1/1:11,7:17:16.19:108,16,0	0/0:17,0:18:38.39:0,38,392	0/0:21,0:21:29.98:0,30,277	0/0:22,0:22:36.01:0,36,339	1/1:6,2:13:8.26:65,8,0	1/1:5,6:11:14.75:119,15,0	1/1:8,8:18:21.68:172,22,0	0/0:18,1:22:23.58:0,24,361	1/1:6,8:15:28.11:186,28,0	1/1:0,15:17:40.45:306,40,0	1/1:7,9:17:29.18:213,29,0	0/1:13,1:22:6.36:58,0,6	0/1:14,0:25:13.68:14,0,39	1/1:5,0:7:3.33:10,3,0	1/1:4,7:13:12.76:88,13,0	1/1:8,8:16:8.63:71,9,0	1/1:5,12:17:23.87:190,24,0	1/1:7,9:16:20.70:166,21,0	1/1:10,5:16:0.93:137,1,0	1/1:4,7:13:22.47:154,22,0	1/1:4,6:10:5.85:47,6,0
chr10	30808783	.	A	AG	6261.23	PASS	AB=1.000;AC=49;AF=0.875;AN=56;BaseQRankSum=2.303;DP=439;FS=0.641;HRun=1;HaplotypeScore=71.3273;InbreedingCoeff=0.8383;MQ=68.39;MQ0=2;MQRankSum=-3.461;QD=15.85;ReadPosRankSum=1.680;VQSLOD=4.9098;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:23:53.43:383,53,0	1/1:1,9:10:11.98:123,12,0	0/1:19,0:11:5.69:6,0,157	0/0:12,0:12:15.89:0,16,179	1/1:20,0:20:47.74:374,48,0	1/1:15,0:15:38.02:238,38,0	1/1:11,0:11:22.90:152,23,0	1/1:21,0:21:61.14:449,61,0	0/0:17,0:17:37.48:0,37,319	1/1:1,20:22:47.92:415,48,0	1/1:2,17:19:41.60:344,42,0	1/1:13,0:13:28.14:195,28,0	1/1:9,0:9:23.23:150,23,0	1/1:18,0:18:42.54:259,43,0	0/0:15,0:15:32.02:0,32,263	1/1:13,0:13:35.11:241,35,0	1/1:19,0:19:46.27:281,46,0	1/1:15,0:15:41.01:264,41,0	1/1:23,0:23:62.16:452,62,0	1/1:19,0:19:44.94:298,45,0	1/1:9,0:8:14.91:114,15,0	1/1:18,0:18:38.42:284,38,0	1/1:14,0:14:26.38:186,26,0	1/1:14,0:14:29.48:196,29,0	1/1:11,0:11:26.42:175,26,0	1/1:16,0:16:44.91:324,45,0	1/1:17,0:17:44.04:303,44,0	1/1:7,0:7:8.75:55,9,0
chr10	30809284	.	C	CT	1241.50	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-5.113;DP=475;FS=0.747;HRun=3;HaplotypeScore=51.5036;InbreedingCoeff=0.9913;MQ=93.58;MQ0=0;MQRankSum=-2.783;QD=30.28;ReadPosRankSum=-1.774;VQSLOD=2.4468;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:57.64:0,58,684	1/1:1,9:10:27.05:356,27,0	0/0:27,0:27:64.89:0,65,903	0/0:20,0:20:57:0,57,630	0/0:17,0:17:24.07:0,24,288	0/0:16,0:16:36.11:0,36,432	0/0:16,0:16:42.11:0,42,481	0/0:32,0:32:72.20:0,72,845	0/0:13,0:13:39.12:0,39,468	1/1:1,17:18:48.16:672,48,0	1/1:1,12:13:27.05:356,27,0	0/0:14,0:14:42.13:0,42,503	0/0:14,0:14:39.12:0,39,467	0/0:16,0:16:42.13:0,42,499	0/0:21,0:21:60.17:0,60,708	0/0:15,0:15:39.12:0,39,468	0/0:25,0:25:69.21:0,69,827	0/0:18,0:18:42.11:0,42,490	0/0:13,0:13:32.83:0,33,363	0/0:8,0:8:24.07:0,24,288	0/0:6,0:6:18.02:0,18,190	0/0:9,0:9:21.06:0,21,252	0/0:13,0:13:30.09:0,30,359	0/0:33,0:33:96.29:0,96,1140	0/0:17,0:17:45.14:0,45,540	0/0:27,1:28:33.31:0,33,811	0/0:10,0:10:30.09:0,30,359	0/0:8,0:8:21.06:0,21,251
chr10	30809576	.	CTGTGTGTGTGTGTGTGTGTGTGTG	C	798.96	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=2.923;DP=708;FS=9.757;HRun=0;HaplotypeScore=364.4588;InbreedingCoeff=0.6711;MQ=63.41;MQ0=11;MQRankSum=-0.909;QD=8.78;ReadPosRankSum=0.430;VQSLOD=0.9455;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:37:36.11:0,36,2022	0/0:13,0:14:11.84:0,12,904	0/0:33,0:25:9.03:0,9,201	0/0:37,0:26:16.61:0,17,387	0/0:17,0:17:9.51:0,10,849	0/0:21,0:21:33.58:0,34,2605	0/0:28,0:27:17.34:0,17,1301	0/0:23,0:23:41.34:0,41,1501	0/0:16,0:17:18.05:0,18,1364	0/0:27,0:27:59.08:0,59,3323	0/0:14,0:14:24.07:0,24,1163	0/0:34,0:32:42.14:0,42,3596	0/0:32,0:32:36.59:0,37,2889	0/0:22,0:22:36.12:0,36,3146	0/0:32,0:32:51.87:0,52,3717	0/0:28,0:29:43.06:0,43,3943	0/0:39,0:39:75.16:0,75,4564	0/0:13,0:13:30.10:0,30,2628	1/1:27,5:31:14.95:444,15,0	1/1:9,2:10:9.03:420,9,0	0/1:48,0:43:54.54:55,0,94	0/0:17,0:17:15.94:0,16,1208	0/0:20,0:20:21.07:0,21,2014	0/0:36,0:36:42.92:0,43,3375	0/0:15,0:15:21.05:0,21,1541	0/0:22,0:22:47.83:0,48,3264	0/0:21,0:22:36.12:0,36,2915	0/0:8,0:11:12.04:0,12,1038
chr10	30809675	.	T	TTGTG	4446.33	PASS	AB=0.905;AC=45;AF=0.865;AN=52;BaseQRankSum=0.729;DP=521;FS=15.580;HRun=0;HaplotypeScore=163.0027;InbreedingCoeff=0.4188;MQ=62.00;MQ0=13;MQRankSum=-0.047;QD=10.71;ReadPosRankSum=-1.300;VQSLOD=3.2588;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:22:2.95:46,3,0	1/1:11,0:12:6:76,6,0	./.	./.	1/1:20,0:19:18.06:328,18,0	1/1:12,0:12:2.99:24,3,0	1/1:19,0:19:9.48:155,9,0	1/1:26,0:26:5.98:79,6,0	0/0:16,0:18:21.04:0,21,285	1/1:11,0:11:18.06:334,18,0	1/1:9,1:16:5.75:83,6,0	1/1:23,0:21:5.90:86,6,0	1/1:13,0:15:6.02:112,6,0	1/1:10,0:15:3.01:52,3,0	0/0:22,0:22:18.02:0,18,233	1/1:17,0:17:8.95:154,9,0	1/1:13,0:17:15.62:196,16,0	1/1:10,0:9:3.01:56,3,0	0/1:17,2:19:23.02:325,0,23	1/1:11,10:23:11.78:224,12,0	1/1:36,1:34:21.34:453,21,0	1/1:13,0:13:6.02:131,6,0	0/0:10,0:10:2.96:0,3,20	1/1:31,0:30:26.74:433,27,0	1/1:10,0:10:6.01:77,6,0	1/1:20,0:25:33.55:634,34,0	1/1:13,0:17:15.05:269,15,0	1/1:3,0:2:6.02:119,6,0
chr10	30810886	.	ATCTTCC	A	9881.09	PASS	AB=0.860;AC=34;AF=0.607;AN=56;BaseQRankSum=4.069;DP=665;FS=15.121;HRun=0;HaplotypeScore=239.7688;InbreedingCoeff=-0.0684;MQ=52.42;MQ0=6;MQRankSum=-0.626;QD=19.04;ReadPosRankSum=1.020;VQSLOD=3.1808;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:37,3:40:66.90:620,0,67	1/1:2,7:9:12.04:251,12,0	0/0:38,0:20:37.41:0,37,820	0/0:47,0:26:20.84:0,21,905	0/1:12,8:20:15.40:143,0,15	0/1:21,6:27:64.21:491,0,64	0/1:22,3:25:17.58:262,0,18	1/1:15,16:29:48.14:867,48,0	0/0:31,0:31:75.24:0,75,2338	1/1:6,14:20:48.15:938,48,0	1/1:1,10:11:17.93:383,18,0	0/1:24,8:32:67.63:623,0,68	0/1:18,6:24:28.64:602,0,29	0/1:26,5:30:99:346,0,102	0/0:30,0:30:72.22:0,72,2066	0/1:20,4:24:79.43:400,0,79	0/1:15,2:17:99:164,0,99	0/1:14,2:16:21.16:254,0,21	1/1:2,10:12:30.08:530,30,0	1/1:1,8:9:6.02:128,6,0	1/1:27,2:28:9.25:291,9,0	1/1:13,2:15:22.82:281,23,0	1/1:12,2:15:32.52:463,33,0	0/1:24,6:30:45:299,0,45	1/1:9,2:11:24.13:439,24,0	0/1:31,4:35:53.69:796,0,54	0/1:22,2:24:70.41:231,0,70	0/1:11,1:12:26.52:77,0,27
chr10	30810954	.	CCTCCTG	C	13278.33	PASS	AB=0.775;AC=35;AF=0.625;AN=56;BaseQRankSum=-0.051;DP=599;FS=10.113;HRun=0;HaplotypeScore=228.2813;InbreedingCoeff=0.3492;MQ=48.60;MQ0=8;MQRankSum=-5.622;QD=29.25;ReadPosRankSum=0.426;VQSLOD=2.8992;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,21:28:1.71:477,2,0	0/0:6,0:6:3.13:0,3,18	0/0:39,0:16:27.90:0,28,693	0/0:41,0:21:12.87:0,13,653	1/1:5,11:16:6:126,6,0	1/1:6,13:19:45.11:910,45,0	1/1:6,25:31:51.60:1068,52,0	1/1:3,18:21:51.98:910,52,0	0/0:22,0:22:54.17:0,54,1644	0/0:22,0:22:28.59:0,29,176	0/1:14,0:14:7.63:8,0,38	0/1:9,13:22:9.18:839,0,9	1/1:6,15:21:36.04:669,36,0	1/1:8,17:24:49.60:959,50,0	0/0:14,0:14:39.13:0,39,1261	0/1:6,14:20:99:839,0,159	0/1:6,11:17:99:446,0,111	0/1:3,13:16:6.45:621,0,6	0/1:12,0:12:0.43:0,0,46	0/1:19,0:19:50.98:55,0,51	0/1:32,0:32:1.27:1,0,131	1/1:1,15:16:30.10:660,30,0	1/1:6,14:20:39.13:862,39,0	0/1:10,21:31:26.55:617,0,27	1/1:7,14:21:42.06:831,42,0	1/1:9,19:28:53.65:1109,54,0	1/1:7,13:20:51.09:1009,51,0	1/1:1,4:5:12.04:262,12,0
chr10	30810957	.	CCTG	C	7897.32	PASS	AB=0.899;AC=44;AF=0.786;AN=56;BaseQRankSum=4.967;DP=582;FS=7.318;HRun=0;HaplotypeScore=228.9082;InbreedingCoeff=0.5493;MQ=48.29;MQ0=7;MQRankSum=-6.123;QD=16.70;ReadPosRankSum=2.305;VQSLOD=3.5880;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:27:12.29:214,12,0	1/1:2,3:5:12.48:175,12,0	0/0:37,0:17:30.73:0,31,484	0/0:36,0:19:21.53:0,22,420	1/1:16,0:15:5.79:43,6,0	1/1:19,0:19:47.82:390,48,0	1/1:29,0:29:51.32:433,51,0	1/1:19,0:19:51.82:451,52,0	0/0:21,0:21:54.09:0,54,1058	1/1:6,18:24:63.92:962,64,0	1/1:5,9:14:20.98:304,21,0	1/1:21,1:22:9.04:292,9,0	1/1:18,0:18:32.24:261,32,0	1/1:26,0:26:53.52:440,54,0	0/0:15,0:15:45.05:0,45,866	0/1:22,0:22:81.52:328,0,82	0/1:17,0:17:66.09:155,0,66	1/1:15,0:15:8.97:237,9,0	1/1:6,7:13:29.96:394,30,0	1/1:7,12:19:38.75:562,39,0	0/1:13,19:32:63.70:77,0,64	1/1:16,0:16:13.81:208,14,0	1/1:17,0:17:38.65:326,39,0	0/1:30,1:31:3.03:227,0,3	1/1:19,0:19:41.79:327,42,0	1/1:26,0:26:64.76:504,65,0	1/1:20,1:21:56.81:493,57,0	1/1:5,0:5:11.74:92,12,0
chr10	30810981	.	G	GCTCCTCCTC	9277.56	PASS	AB=1.000;AC=36;AF=0.643;AN=56;BaseQRankSum=3.055;DP=583;FS=0.531;HRun=0;HaplotypeScore=278.8075;InbreedingCoeff=-0.1308;MQ=42.26;MQ0=4;MQRankSum=-6.135;QD=17.60;ReadPosRankSum=-2.807;VQSLOD=3.3911;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:33,0:33:5.06:216,5,0	1/1:2,3:5:8.98:194,9,0	0/1:23,0:13:7.65:8,0,141	0/0:13,0:6:9.41:0,9,72	1/1:17,0:17:5.74:37,6,0	0/1:19,0:19:17.15:501,0,17	0/1:28,0:28:42.93:43,0,79	0/1:23,0:21:69.51:70,0,311	0/0:25,0:25:45.19:0,45,1403	1/1:19,3:22:48.01:1107,48,0	1/1:17,1:18:27.40:464,27,0	0/1:24,0:24:11.66:711,0,12	0/1:20,0:20:58.60:377,0,59	0/1:31,0:31:4.65:1050,0,5	0/0:16,0:16:24.55:0,25,840	0/1:20,0:20:77.96:457,0,78	0/1:16,0:16:73.84:272,0,74	0/1:11,0:11:46.03:143,0,46	0/1:14,0:14:49.01:49,0,79	0/1:19,0:19:49.36:99,0,49	1/1:33,0:33:2.62:61,3,0	1/1:17,0:17:8.99:137,9,0	1/1:25,0:25:12.03:221,12,0	1/1:27,0:27:15.35:238,15,0	1/1:13,0:13:18.02:429,18,0	0/1:33,0:33:72.96:1165,0,73	0/1:26,0:26:76.57:1018,0,77	1/1:9,0:9:11.99:212,12,0
chr10	30810993	.	C	CAT	2167.51	PASS	AB=0.823;AC=26;AF=0.464;AN=56;BaseQRankSum=9.006;DP=562;FS=13.208;HRun=0;HaplotypeScore=227.9173;InbreedingCoeff=-0.1315;MQ=40.63;MQ0=3;MQRankSum=-6.585;QD=4.96;ReadPosRankSum=4.947;VQSLOD=1.3979;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:29,4:33:3.87:43,0,4	0/0:7,0:7:17.07:0,17,208	0/0:17,1:9:24.08:0,24,373	0/0:12,0:7:17.85:0,18,252	1/1:10,7:17:8.58:61,9,0	1/1:14,6:20:17.63:215,18,0	0/1:21,3:24:4.88:5,0,76	0/1:21,0:19:13.22:13,0,93	0/0:25,0:25:72.22:0,72,1123	0/0:23,0:23:63.85:0,64,838	0/0:19,0:19:37.81:0,38,522	0/1:17,5:22:92.71:118,0,93	0/1:14,3:17:31.41:88,0,31	0/1:16,13:28:23.13:306,0,23	0/0:21,0:21:63.18:0,63,957	0/1:16,5:21:52.80:132,0,53	0/1:11,3:14:73.18:73,0,80	0/1:11,2:13:45.36:45,0,80	0/1:7,3:10:45.91:78,0,46	0/1:12,7:19:16.64:115,0,17	0/1:28,4:31:25.35:25,0,109	0/1:16,5:21:22.83:28,0,23	1/1:17,5:22:13.09:70,13,0	0/1:21,4:25:35.88:36,0,65	1/1:6,5:11:7.81:135,8,0	0/1:19,11:30:99:289,0,119	0/1:18,9:27:11.02:353,0,11	1/1:7,2:9:11.70:117,12,0
chr10	30810994	.	C	CATCATCA	10311.55	PASS	AB=0.879;AC=35;AF=0.625;AN=56;BaseQRankSum=1.165;DP=563;FS=0.917;HRun=0;HaplotypeScore=236.5014;InbreedingCoeff=0.1151;MQ=40.77;MQ0=3;MQRankSum=-6.835;QD=22.03;ReadPosRankSum=5.022;VQSLOD=3.8771;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:29,4:33:8.36:361,0,8	0/1:7,0:7:9.96:10,0,210	0/0:18,0:9:24.08:0,24,407	0/0:13,0:8:16.61:0,17,314	1/1:10,6:17:8.59:170,9,0	1/1:13,6:19:16.56:715,17,0	0/1:21,3:24:44.20:44,0,48	0/1:22,0:20:71.90:210,0,72	0/0:25,0:25:72.22:0,72,1768	0/1:23,0:23:0.62:1,0,906	0/0:18,0:18:35.86:0,36,604	1/1:18,5:23:2.45:631,2,0	1/1:14,3:17:2.14:414,2,0	1/1:16,13:28:36.15:1302,36,0	0/0:21,0:21:60.15:0,60,1458	0/1:16,5:21:50.73:581,0,51	0/1:11,3:14:80.02:302,0,80	0/1:11,2:13:17.12:308,0,17	0/1:7,0:10:41.70:266,0,42	1/1:12,0:19:7.77:501,8,0	0/1:28,0:31:99:165,0,103	1/1:16,5:21:20.86:282,21,0	1/1:17,5:22:12.04:291,12,0	1/1:21,4:25:15.23:298,15,0	1/1:6,5:11:24.07:596,24,0	0/1:19,11:30:44.70:1202,0,45	1/1:18,9:27:10.31:1350,10,0	1/1:7,2:9:0.57:312,1,0
chr10	30810997	.	A	ATCC	2278.82	PASS	AB=0.990;AC=29;AF=0.518;AN=56;BaseQRankSum=11.472;DP=558;FS=6.867;HRun=0;HaplotypeScore=227.5135;InbreedingCoeff=-0.0268;MQ=42.59;MQ0=3;MQRankSum=-7.835;QD=5.13;ReadPosRankSum=6.852;VQSLOD=1.1256;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:34,0:34:6.34:78,6,0	0/1:6,0:6:16.81:17,0,90	0/0:19,0:10:23.88:0,24,273	0/0:15,0:10:8.43:0,8,229	0/1:17,0:17:11.77:63,0,12	1/1:18,0:18:25:205,25,0	0/1:25,1:26:41.20:46,0,41	0/0:19,0:17:13.65:0,14,105	0/0:24,0:24:66.20:0,66,1050	0/1:22,0:22:99:145,0,404	0/0:18,0:18:31.83:0,32,393	0/1:22,1:23:37.36:147,0,37	0/1:17,0:17:0.39:87,0,0	1/1:29,0:28:23.79:266,24,0	0/0:19,0:19:42.16:0,42,803	0/1:21,0:21:30.77:107,0,31	0/1:12,1:13:1.61:171,0,2	0/1:12,0:12:23.57:27,0,24	0/1:8,0:8:14.33:46,0,14	0/1:20,0:20:38.55:46,0,39	0/1:31,0:30:45.69:69,0,46	1/1:21,0:21:12.38:113,12,0	0/1:23,0:23:5.11:67,0,5	1/1:23,1:24:7.93:102,8,0	1/1:11,0:11:14.35:107,14,0	0/1:31,0:31:19.04:179,0,19	0/1:28,0:28:9.87:281,0,10	1/1:9,0:9:11.93:89,12,0
chr10	30811449	.	AG	A	2260.86	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-1.680;DP=637;FS=5.571;HRun=2;HaplotypeScore=87.7744;InbreedingCoeff=0.9932;MQ=88.98;MQ0=0;MQRankSum=-2.551;QD=33.25;ReadPosRankSum=-1.016;VQSLOD=3.0915;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:96.29:0,96,1390	0/0:15,0:15:45.12:0,45,616	0/0:27,0:27:78.26:0,78,1132	0/0:19,0:20:30.88:0,31,625	0/0:23,0:23:63.18:0,63,885	0/0:19,0:19:57.16:0,57,811	0/0:28,0:28:84.25:0,84,1213	0/0:32,0:32:87.28:0,87,1264	0/0:30,0:30:90.25:0,90,1293	0/0:22,0:21:66.20:0,66,937	0/0:17,0:17:51.09:0,51,728	0/0:36,0:36:99:0,108,1531	0/0:30,0:30:90.22:0,90,1261	0/0:11,0:11:30.10:0,30,450	0/0:31,0:31:93.30:0,93,1373	0/0:23,0:23:66.22:0,66,989	0/0:28,0:28:84.23:0,84,1210	0/0:8,0:8:24.08:0,24,360	1/1:1,14:15:42.13:536,42,0	1/1:0,27:27:78.15:971,78,0	1/1:0,26:26:69.22:896,69,0	0/0:22,0:22:63.21:0,63,943	0/0:13,0:13:36.12:0,36,539	0/0:25,0:25:75.25:0,75,1124	0/0:15,0:15:45.15:0,45,674	0/0:27,0:27:81.27:0,81,1213	0/0:29,0:28:87.25:0,87,1242	0/0:5,0:5:15.05:0,15,214
chr10	30811877	.	G	GAC	16599.98	PASS	AB=0.851;AC=41;AF=0.732;AN=56;BaseQRankSum=-10.948;DP=824;FS=2.837;HRun=0;HaplotypeScore=122.5704;InbreedingCoeff=0.2915;MQ=53.94;MQ0=31;MQRankSum=1.384;QD=23.61;ReadPosRankSum=4.476;VQSLOD=5.6654;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,30:32:21.33:618,21,0	0/1:14,0:16:63.34:63,0,123	0/0:24,0:3:1.23:0,1,37	0/0:48,0:11:12.18:0,12,115	1/1:2,30:32:36.04:653,36,0	1/1:2,17:19:27.09:520,27,0	1/1:3,21:24:17.04:451,17,0	1/1:6,43:47:99:1721,107,0	0/0:26,0:26:78.19:0,78,1076	0/1:32,0:38:99:307,0,466	0/1:12,0:13:55.31:55,0,119	1/1:3,25:27:44.05:1024,44,0	1/1:1,26:27:41.73:761,42,0	1/1:1,20:21:47.97:922,48,0	0/0:22,0:22:63.17:0,63,906	1/1:1,33:34:49.81:1142,50,0	1/1:3,35:37:66.64:1229,67,0	1/1:3,18:21:29.89:577,30,0	0/1:24,0:24:99:193,0,325	0/1:30,0:32:69.49:69,0,463	0/1:30,0:31:99:192,0,191	1/1:2,25:26:36.09:692,36,0	1/1:4,23:27:6.61:332,7,0	1/1:8,34:40:57.19:1097,57,0	1/1:3,17:20:27.09:520,27,0	1/1:2,34:34:85.43:1433,85,0	1/1:2,33:35:75.26:1438,75,0	0/1:5,20:25:18.49:590,0,18
chr10	30811926	.	AGATT	A	2630.07	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=9.096;DP=698;FS=12.102;HRun=0;HaplotypeScore=126.5725;InbreedingCoeff=0.9250;MQ=60.04;MQ0=18;MQRankSum=1.036;QD=19.48;ReadPosRankSum=3.620;VQSLOD=2.8971;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:39.13:0,39,872	1/1:1,7:8:21.07:331,21,0	0/0:33,0:17:5.96:0,6,110	0/0:46,0:26:8.82:0,9,76	0/0:33,0:33:73.49:0,73,1633	0/0:23,0:23:39.13:0,39,894	0/0:19,0:19:24.07:0,24,490	0/0:37,0:37:30.10:0,30,657	0/0:31,0:31:66.23:0,66,1496	1/1:10,17:27:51.17:790,51,0	1/1:3,16:19:21.33:373,21,0	0/0:27,0:26:45.15:0,45,1038	0/0:23,0:23:33.11:0,33,674	0/0:17,0:17:30.10:0,30,712	0/0:25,1:26:3.93:0,4,1081	0/0:28,0:28:39.13:0,39,906	0/0:23,0:23:39.13:0,39,915	0/0:20,0:17:15.05:0,15,356	1/1:19,3:21:12.04:189,12,0	1/1:8,22:30:38.81:611,39,0	1/1:12,17:29:33.11:520,33,0	0/0:23,0:22:46.87:0,47,1031	0/0:19,0:19:36.12:0,36,812	0/0:37,0:36:49.88:0,50,1098	0/0:12,0:12:21.07:0,21,464	0/0:17,0:16:33.11:0,33,741	0/0:20,0:20:30.10:0,30,680	0/0:22,0:22:24.08:0,24,570
chr10	30818251	.	G	GC	197.07	PASS	AC=16;AF=0.727;AN=22;DP=89;FS=0.000;HRun=0;HaplotypeScore=8.0661;InbreedingCoeff=0.1495;MQ=23.89;MQ0=69;QD=5.33;VQSLOD=2.7570;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,2:2:3.01:42,3,0	./.	./.	./.	./.	./.	./.	1/1:3,0:2:5.96:45,6,0	./.	1/1:3,1:1:3.01:44,3,0	0/0:1,0:1:0:0,0,0	0/0:2,0:1:0:0,0,0	1/1:2,0:2:2.86:25,3,0	./.	./.	./.	1/1:6,0:1:3:25,3,0	./.	./.	./.	0/0:3,0:1:0:0,0,0	./.	./.	1/1:7,0:1:2.99:24,3,0	./.	./.	1/1:4,3:3:3.01:43,3,0	1/1:2,0:1:2.97:20,3,0
chr10	30819098	.	A	AGCTC	9365.27	PASS	AB=0.944;AC=13;AF=0.232;AN=56;BaseQRankSum=-8.777;DP=597;FS=7.759;HRun=0;HaplotypeScore=117.3836;InbreedingCoeff=0.8988;MQ=80.98;MQ0=1;MQRankSum=-6.701;QD=66.42;ReadPosRankSum=-2.105;VQSLOD=6.3358;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,108,2225	1/1:0,9:10:27.09:781,27,0	0/0:14,0:14:42.14:0,42,842	0/0:18,0:18:45.12:0,45,876	0/0:24,0:24:72.25:0,72,1507	0/0:24,0:24:69.24:0,69,1440	0/0:22,0:22:66.23:0,66,1384	0/0:15,0:15:39.13:0,39,777	0/0:17,0:17:48.16:0,48,1007	1/1:2,20:22:60.21:1736,60,0	1/1:3,23:28:69.24:1967,69,0	0/0:19,0:19:57.20:0,57,1172	0/0:23,0:23:66.23:0,66,1384	0/0:13,0:13:39.13:0,39,818	0/0:26,0:25:78.27:0,78,1634	0/0:12,0:12:36.12:0,36,737	0/0:28,0:28:78.27:0,78,1606	0/0:22,0:21:63.22:0,63,1320	1/1:3,22:27:75.26:2052,75,0	1/1:2,19:22:60.21:1728,60,0	1/1:3,12:15:39.09:1062,39,0	0/0:27,0:27:81.26:0,81,1660	0/0:15,0:15:45.15:0,45,929	0/0:31,0:31:93.32:0,93,1923	0/0:28,0:28:84.29:0,84,1744	0/1:16,1:17:38.83:39,0,896	0/0:35,0:35:99:0,102,2012	0/0:7,0:7:21.07:0,21,440
chr10	30819219	.	TG	T	2732.23	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=9.900;DP=517;FS=3.152;HRun=6;HaplotypeScore=53.9893;InbreedingCoeff=0.9929;MQ=82.29;MQ0=0;MQRankSum=-0.948;QD=26.27;ReadPosRankSum=1.879;VQSLOD=3.9988;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:81.26:0,81,1063	1/1:0,4:4:12.03:129,12,0	0/0:22,0:22:45.22:0,45,673	0/0:15,0:15:24.06:0,24,299	0/0:26,0:26:72.22:0,72,933	0/0:13,0:13:33.11:0,33,430	0/0:21,0:21:57.19:0,57,748	0/0:23,0:23:57.18:0,57,733	0/0:13,0:13:39.13:0,39,513	1/1:0,17:17:48.12:515,48,0	1/1:4,19:23:54.13:578,54,0	0/0:11,0:11:33.11:0,33,434	0/0:13,0:13:33.11:0,33,430	0/0:12,0:12:36.11:0,36,460	0/0:25,0:24:63.20:0,63,829	0/0:13,0:13:36.07:0,36,452	0/0:24,0:24:63.20:0,63,828	0/0:20,0:20:57.19:0,57,749	1/1:2,17:19:51.10:536,51,0	1/1:1,28:29:78.20:838,78,0	1/1:0,12:12:30.08:322,30,0	0/0:12,0:12:36.12:0,36,473	0/0:21,0:21:60.18:0,60,769	0/0:17,0:17:51.15:0,51,654	0/0:14,0:14:42.14:0,42,547	0/0:31,0:31:65.19:0,65,1090	0/0:25,0:25:75.24:0,75,985	0/0:13,0:13:39.13:0,39,513
chr10	30819429	.	G	GAA	2606.98	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=5.034;DP=559;FS=0.827;HRun=9;HaplotypeScore=79.9474;InbreedingCoeff=0.9984;MQ=66.31;MQ0=1;MQRankSum=-6.894;QD=22.67;ReadPosRankSum=0.130;VQSLOD=2.9721;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:69.11:0,69,727	1/1:1,1:9:20.20:104,20,0	0/0:21,0:18:41.33:0,41,417	0/0:16,0:15:33.06:0,33,343	0/0:21,0:21:60.15:0,60,638	0/0:21,0:21:51.09:0,51,542	0/0:15,0:15:42.09:0,42,447	0/0:30,0:30:66.09:0,66,751	0/0:15,0:15:39.09:0,39,410	1/1:6,0:16:33.15:135,33,0	1/1:1,0:27:59.67:201,60,0	0/0:20,0:20:51.08:0,51,535	0/0:15,0:15:42.10:0,42,447	0/0:18,0:18:42.03:0,42,430	0/0:23,0:23:63.12:0,63,654	0/0:11,0:11:33.07:0,33,343	0/0:22,0:22:62.73:0,63,638	0/0:15,0:15:36.07:0,36,383	1/1:10,11:22:57.07:723,57,0	1/1:2,25:29:83.75:1214,84,0	1/1:1,11:12:27.98:417,28,0	0/0:10,0:10:27.07:0,27,287	0/0:24,0:24:57.10:0,57,597	0/0:26,0:26:69.13:0,69,720	0/0:20,0:20:57.14:0,57,605	0/0:23,0:25:50.97:0,51,626	0/0:27,0:26:75.17:0,75,789	0/0:22,0:22:66.17:0,66,702
chr10	30819474	.	G	GATAA	6407.79	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-0.507;DP=573;FS=5.291;HRun=0;HaplotypeScore=98.8039;InbreedingCoeff=0.9944;MQ=79.18;MQ0=0;MQRankSum=-7.571;QD=55.72;ReadPosRankSum=-0.842;VQSLOD=6.0010;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:63.54:0,64,1156	1/1:2,7:9:21.07:538,21,0	0/0:22,0:21:18.57:0,19,738	0/0:12,0:12:18.10:0,18,324	0/0:28,0:28:72.25:0,72,1271	0/0:24,0:24:72.25:0,72,1256	0/0:14,0:14:33.10:0,33,555	0/0:25,0:25:63.19:0,63,1032	0/0:16,0:16:42.14:0,42,742	1/1:1,16:17:45.15:1145,45,0	1/1:8,21:29:72.20:1747,72,0	0/0:20,0:20:54.18:0,54,954	0/0:17,0:17:45.15:0,45,794	0/0:18,0:18:51.17:0,51,900	0/0:20,0:20:57.20:0,57,1007	0/0:15,0:15:36.12:0,36,628	0/0:24,0:24:69.22:0,69,1189	0/0:18,0:18:43.74:0,44,836	1/1:10,13:24:48.14:1120,48,0	1/1:9,17:27:57.20:1396,57,0	1/1:4,5:9:18.06:462,18,0	0/0:17,0:17:42.14:0,42,741	0/0:22,0:22:54.18:0,54,953	0/0:24,0:24:60.21:0,60,1046	0/0:17,0:17:51.14:0,51,844	0/0:23,0:23:60.21:0,60,1056	0/0:31,0:30:84.29:0,84,1466	0/0:23,0:23:60.21:0,60,1060
chr10	30819721	.	T	TA	10707.07	PASS	AB=0.551;AC=46;AF=0.821;AN=56;BaseQRankSum=-7.964;DP=507;FS=4.162;HRun=9;HaplotypeScore=46.5307;InbreedingCoeff=0.7072;MQ=74.88;MQ0=1;MQRankSum=-1.462;QD=23.38;ReadPosRankSum=1.254;VQSLOD=5.6282;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,19:22:33.99:584,34,0	1/1:3,6:9:9.07:157,9,0	0/0:14,0:12:11.93:0,12,92	0/0:12,0:9:0.78:0,1,15	1/1:2,19:22:42.39:606,42,0	1/1:1,16:17:39.11:430,39,0	1/1:2,23:25:51.11:550,51,0	1/1:7,23:30:43.06:655,43,0	0/0:13,0:13:32.99:0,33,286	1/1:5,18:23:54.06:550,54,0	1/1:5,17:22:11.20:410,11,0	1/1:0,9:9:21.06:232,21,0	1/1:2,13:15:36.10:397,36,0	1/1:3,17:20:48.08:516,48,0	0/0:10,0:10:26.96:0,27,228	1/1:3,11:14:30.08:331,30,0	1/1:1,22:23:28.13:506,28,0	1/1:0,16:16:36.10:397,36,0	0/1:4,16:20:0.71:420,0,1	1/1:6,24:30:66.18:727,66,0	0/1:1,4:6:8.04:134,0,8	1/1:4,8:12:24.06:265,24,0	1/1:3,8:11:7.99:156,8,0	1/1:6,11:17:30.08:331,30,0	1/1:2,24:26:66.18:726,66,0	1/1:6,20:26:57.10:593,57,0	1/1:7,23:30:63.15:683,63,0	1/1:0,13:13:33.07:354,33,0
chr10	30820744	.	T	TC	3641.98	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-11.233;DP=617;FS=10.105;HRun=6;HaplotypeScore=58.4231;InbreedingCoeff=0.9965;MQ=77.78;MQ0=1;MQRankSum=0.074;QD=30.60;ReadPosRankSum=-0.377;VQSLOD=3.6012;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:69.13:0,69,695	1/1:0,10:10:27.09:340,27,0	0/0:14,0:13:35.89:0,36,332	0/0:21,0:20:35.03:0,35,320	0/0:22,0:22:66.15:0,66,672	0/0:20,0:20:60.14:0,60,612	0/0:19,0:19:42.04:0,42,408	0/0:25,0:25:57.97:0,58,582	0/0:20,0:20:57.11:0,57,570	1/1:2,28:30:78.24:966,78,0	1/1:1,17:17:48.10:585,48,0	0/0:15,0:15:42.06:0,42,411	0/0:25,0:25:72.16:0,72,734	0/0:18,0:18:42.06:0,42,411	0/0:27,0:27:75.16:0,75,765	0/0:20,0:20:51.10:0,51,515	0/0:36,0:36:99:0,105,1056	0/0:6,0:6:15.03:0,15,153	1/1:9,14:23:42.12:511,42,0	1/1:1,23:24:66.04:788,66,0	1/1:2,12:14:36.12:453,36,0	0/0:27,0:27:75.15:0,75,758	0/0:22,0:22:60.13:0,60,607	0/0:27,0:27:72.14:0,72,726	0/0:29,0:28:87.19:0,87,883	0/0:34,1:35:64.48:0,64,964	0/0:26,0:26:69.15:0,69,703	0/0:16,0:16:48.08:0,48,480
chr10	30821924	.	GCA	G	4397.29	PASS	AB=0.904;AC=35;AF=0.673;AN=52;BaseQRankSum=3.123;DP=601;FS=4.003;HRun=0;HaplotypeScore=83.5469;InbreedingCoeff=0.7024;MQ=61.62;MQ0=15;MQRankSum=1.113;QD=11.02;ReadPosRankSum=0.739;VQSLOD=4.1256;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:17,19:41:49.27:459,49,0	0/0:14,0:14:24.05:0,24,320	0/0:30,0:14:0.47:0,0,1	./.	1/1:12,8:23:26.53:240,27,0	1/1:8,11:21:32.75:326,33,0	1/1:8,9:18:20.89:213,21,0	./.	0/1:18,2:20:35.34:35,0,493	0/0:20,0:20:27.08:0,27,372	0/1:17,1:17:9.10:9,0,271	1/1:14,10:25:32.49:306,32,0	1/1:12,7:22:28.55:265,29,0	1/1:9,11:22:41.44:388,41,0	0/1:21,3:23:2.18:2,0,513	1/1:7,10:17:24.06:265,24,0	1/1:15,7:22:18.05:199,18,0	1/1:4,7:10:21.06:232,21,0	0/0:15,0:16:16.26:0,16,157	0/0:22,0:26:26.03:0,26,215	0/0:23,0:26:23.98:0,24,205	1/1:16,8:28:29.88:256,30,0	0/0:8,0:14:8.99:0,9,76	1/1:12,12:25:41.32:420,41,0	1/1:10,9:19:26.91:279,27,0	1/1:12,7:19:4.12:212,4,0	1/1:6,4:10:14.71:144,15,0	1/1:7,4:12:14.86:147,15,0
chr10	30821989	.	GTGA	G	2992.63	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=6.716;DP=615;FS=2.395;HRun=0;HaplotypeScore=105.1722;InbreedingCoeff=0.9964;MQ=80.22;MQ0=0;MQRankSum=-4.366;QD=39.38;ReadPosRankSum=-0.761;VQSLOD=4.6024;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,132,3115	0/0:9,0:9:27.09:0,27,659	0/0:25,0:22:66.12:0,66,1449	0/0:23,0:21:52.69:0,53,1071	0/0:18,0:18:48.15:0,48,1134	0/0:17,0:17:51.18:0,51,1233	0/0:24,0:24:69.24:0,69,1648	0/0:19,0:19:54.18:0,54,1263	0/0:29,0:29:87.30:0,87,2114	0/0:6,0:6:18.06:0,18,444	0/0:14,0:14:42.14:0,42,1028	0/0:32,0:32:90.27:0,90,2117	0/0:18,0:18:54.19:0,54,1320	0/0:24,0:24:72.23:0,72,1718	0/0:25,0:25:75.26:0,75,1813	0/0:32,0:32:93.32:0,93,2263	0/0:24,0:24:72.21:0,72,1690	0/0:21,0:21:63.22:0,63,1543	1/1:0,27:27:78.27:1436,78,0	1/1:0,21:21:42.14:782,42,0	1/1:1,27:28:51.15:917,51,0	0/0:23,0:23:69.24:0,69,1664	0/0:11,0:11:30.10:0,30,739	0/0:33,0:33:99:0,99,2342	0/0:10,0:10:30.10:0,30,703	0/0:22,0:22:60.21:0,60,1470	0/0:18,0:18:54.19:0,54,1322	0/0:14,0:14:42.14:0,42,1028
chr10	30822494	.	T	TC	2440.17	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-3.622;DP=327;FS=20.513;HRun=1;HaplotypeScore=53.2522;InbreedingCoeff=0.9592;MQ=88.64;MQ0=0;MQRankSum=-4.400;QD=30.50;ReadPosRankSum=3.727;VQSLOD=2.0404;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:51.09:0,51,627	1/1:1,7:8:18.06:270,18,0	0/0:15,0:15:43.67:0,44,511	0/0:14,0:14:35.71:0,36,398	0/0:12,0:12:18.06:0,18,234	0/0:14,0:14:36.10:0,36,452	0/0:12,0:12:30.09:0,30,376	0/0:22,0:22:60.19:0,60,768	0/0:10,0:11:27.09:0,27,351	1/1:0,16:16:39.13:584,39,0	1/1:0,17:17:36.51:504,37,0	0/0:9,0:9:27.07:0,27,324	0/0:5,0:5:15.05:0,15,195	0/0:11,0:11:33.11:0,33,428	0/0:11,0:11:27.09:0,27,350	0/0:11,0:11:30.09:0,30,376	0/0:8,0:8:18.06:0,18,234	0/0:12,0:12:30.10:0,30,389	1/1:1,8:9:18.82:352,19,0	1/1:3,15:18:42.07:616,42,0	1/1:2,10:12:20.66:300,21,0	0/0:2,0:2:6.02:0,6,78	0/0:8,0:8:21.07:0,21,272	0/0:4,0:4:12.04:0,12,152	0/0:10,0:10:27.09:0,27,349	0/0:6,1:7:18.05:0,18,219	0/0:16,0:16:42.13:0,42,532	0/0:14,0:14:42.11:0,42,525
chr10	30822504	.	T	TG	253.69	PASS	AB=0.935;AC=26;AF=0.464;AN=56;BaseQRankSum=1.136;DP=383;FS=0.000;HRun=12;HaplotypeScore=108.1483;InbreedingCoeff=0.2973;MQ=76.63;MQ0=0;MQRankSum=-2.469;QD=0.98;ReadPosRankSum=-2.537;VQSLOD=-0.5402;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:19:0.89:2,1,0	0/0:8,0:8:2.89:0,3,22	0/0:11,0:12:5.53:0,6,16	0/1:13,1:13:5.31:65,0,5	0/1:9,4:13:0:0,0,0	1/1:13,1:14:5.99:52,6,0	0/1:7,5:12:14.24:14,0,70	0/1:22,1:23:0:0,0,0	0/0:10,0:10:2.90:0,3,22	0/0:18,0:20:27.60:0,28,186	0/0:15,0:16:15.66:0,16,109	1/1:12,1:13:5.96:49,6,0	1/1:14,0:14:8.98:74,9,0	0/1:11,0:11:0:0,0,0	0/0:13,0:16:13.79:0,14,86	0/0:10,7:17:2.08:0,2,20	1/1:7,1:11:6.15:29,6,0	0/1:17,2:19:29.28:41,0,29	0/0:9,0:9:2.92:0,3,18	0/0:12,0:16:7.68:0,8,23	0/1:7,0:10:0:0,0,0	1/1:8,0:8:2.99:24,3,0	0/1:15,0:15:0.02:0,0,0	0/1:5,0:5:0:0,0,0	0/1:18,0:18:0:0,0,0	0/1:8,0:8:0:0,0,0	0/1:20,1:21:6.54:7,0,56	1/1:6,5:11:3:29,3,0
chr10	30822955	.	CATTTATTT	C	3423.36	PASS	AC=30;AF=0.750;AN=40;BaseQRankSum=-1.551;DP=305;FS=1.910;HRun=0;HaplotypeScore=97.3889;InbreedingCoeff=0.6264;MQ=59.46;MQ0=4;MQRankSum=-5.124;QD=15.78;ReadPosRankSum=1.351;VQSLOD=2.4164;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:15,4:19:9.03:225,9,0	1/1:5,2:7:6.02:150,6,0	./.	./.	1/1:7,5:12:3.01:71,3,0	1/1:3,10:13:24.08:599,24,0	./.	1/1:33,0:31:3.01:53,3,0	0/0:6,0:6:9.03:0,9,246	1/1:11,5:16:15.04:280,15,0	1/1:7,2:9:6.02:129,6,0	./.	1/1:2,1:3:3.01:75,3,0	1/1:5,2:7:6.02:148,6,0	0/0:1,0:1:3.01:0,3,123	./.	0/0:13,0:21:23.98:0,24,256	0/0:5,0:22:50.89:0,51,416	1/1:9,0:17:15.05:279,15,0	1/1:8,0:19:18.06:335,18,0	./.	./.	./.	0/0:6,0:6:0:0,0,0	1/1:7,6:13:12.04:297,12,0	1/1:11,5:15:15.05:357,15,0	1/1:15,2:17:6.02:137,6,0	1/1:10,5:15:12.04:291,12,0
chr10	30830689	.	A	AG	229.67	PASS	AC=8;AF=0.154;AN=52;BaseQRankSum=4.896;DP=431;FS=13.261;HRun=1;HaplotypeScore=55.3047;InbreedingCoeff=0.8001;MQ=56.59;MQ0=3;MQRankSum=-4.509;QD=14.35;ReadPosRankSum=-0.591;VQSLOD=1.4232;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:93.30:0,93,1283	./.	0/0:19,0:11:30.06:0,30,391	0/0:24,0:13:8.66:0,9,363	0/0:13,0:13:33.11:0,33,460	0/0:20,0:20:48.12:0,48,646	0/0:21,0:21:48.16:0,48,670	0/0:21,0:21:60.19:0,60,821	0/0:18,0:18:45.15:0,45,619	1/1:0,6:5:12.04:158,12,0	1/1:0,2:2:3:28,3,0	0/0:16,0:16:39.25:0,39,545	0/0:22,0:22:45.05:0,45,606	0/0:16,0:16:39.13:0,39,545	0/0:25,0:25:54.18:0,54,754	0/0:23,0:23:48.09:0,48,670	0/0:34,0:34:99:0,99,1300	0/0:13,0:13:39.13:0,39,545	1/1:0,7:4:9.03:128,9,0	1/1:0,1:1:3.01:45,3,0	./.	0/0:10,0:10:24.08:0,24,335	0/0:8,0:8:24.08:0,24,333	0/0:13,0:13:39.09:0,39,523	0/0:10,0:10:30.07:0,30,398	0/0:13,0:13:36.12:0,36,503	0/0:24,0:24:54.11:0,54,754	0/0:1,0:1:3.01:0,3,42
chr10	30832984	.	C	CT	1480.90	PASS	AB=0.976;AC=39;AF=0.696;AN=56;BaseQRankSum=0.584;DP=454;FS=6.869;HRun=18;HaplotypeScore=65.6111;InbreedingCoeff=-0.0626;MQ=66.92;MQ0=7;MQRankSum=-1.733;QD=3.43;ReadPosRankSum=-1.904;VQSLOD=-0.7223;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:14,0:14:27.89:49,0,28	1/1:7,0:7:8.52:47,9,0	0/1:37,1:14:1.02:6,0,1	0/1:27,2:11:3.37:3,0,12	0/1:17,0:17:29.07:51,0,29	1/1:12,1:14:12.80:68,13,0	0/1:17,1:18:7.06:94,0,7	1/1:23,1:24:15.88:80,16,0	0/0:14,0:16:24.31:0,24,106	1/1:21,0:21:24.03:106,24,0	1/1:18,0:18:17.45:87,17,0	0/1:9,0:9:9.06:34,0,9	0/1:11,1:12:0.86:38,0,1	1/1:9,0:9:8.90:47,9,0	0/1:12,0:13:9.72:10,0,23	1/1:9,0:9:7.05:107,7,0	1/1:17,1:19:4.57:125,5,0	1/1:22,0:22:4.14:86,4,0	0/1:17,0:17:18:35,0,18	0/1:22,0:22:12.42:51,0,12	0/0:6,0:6:6.97:0,7,28	1/1:11,1:12:7.71:41,8,0	0/1:17,1:19:10.29:133,0,10	1/1:4,0:4:5.92:42,6,0	0/1:13,0:12:13.81:49,0,14	1/1:19,0:20:20.60:117,21,0	0/1:17,0:17:10.52:43,0,11	1/1:13,1:15:6.33:91,6,0
chr10	30833073	.	TA	T	7600.29	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=3.052;DP=469;FS=1.326;HRun=11;HaplotypeScore=55.0554;InbreedingCoeff=0.9341;MQ=80.62;MQ0=1;MQRankSum=-1.734;QD=19.10;ReadPosRankSum=3.893;VQSLOD=5.7902;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,19:20:41.95:344,42,0	1/1:1,4:5:11.94:93,12,0	0/0:19,0:17:26.58:0,27,209	0/0:19,0:14:6.32:0,6,79	1/1:1,26:28:70.63:551,71,0	1/1:1,12:13:29.96:246,30,0	1/1:3,14:18:8.99:269,9,0	1/1:2,15:17:41.90:335,42,0	0/0:14,1:15:14.39:0,14,337	1/1:1,22:23:65.90:539,66,0	1/1:0,16:17:43.98:351,44,0	1/1:3,7:10:23.97:197,24,0	1/1:3,13:16:35.95:296,36,0	1/1:0,12:12:23.97:197,24,0	0/0:18,0:18:51.11:0,51,536	1/1:3,14:17:38.95:320,39,0	1/1:2,18:22:49.01:381,49,0	1/1:0,17:17:41.95:345,42,0	1/1:0,10:11:32.85:257,33,0	1/1:3,28:31:48.78:594,49,0	1/1:0,11:12:32:252,32,0	1/1:2,12:14:33.43:272,33,0	1/1:1,21:22:56.43:467,56,0	1/1:0,12:12:23.97:197,24,0	1/1:1,16:17:35.96:296,36,0	1/1:0,9:10:29.01:228,29,0	1/1:2,21:23:56.93:468,57,0	1/1:7,4:11:14.15:106,14,0
chr10	30836012	.	TGCCTG	T	37.50	PASS	AB=0.565;AC=1;AF=0.018;AN=56;BaseQRankSum=-1.422;DP=417;FS=1.701;HRun=0;HaplotypeScore=70.3154;InbreedingCoeff=-0.0251;MQ=65.34;MQ0=13;MQRankSum=-4.092;QD=2.88;ReadPosRankSum=-3.424;VQSLOD=0.7049;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:30.10:0,30,769	0/0:4,0:4:12.04:0,12,332	0/0:41,0:11:32.67:0,33,529	0/0:33,0:8:12.67:0,13,250	0/0:23,0:23:53.25:0,53,1398	0/0:18,0:16:39.13:0,39,985	0/0:8,0:7:21.07:0,21,543	0/0:17,0:17:47.48:0,47,1143	0/0:8,0:8:17.73:0,18,483	0/1:3,10:11:99:112,0,227	0/0:12,0:10:30.10:0,30,791	0/0:11,0:10:24.08:0,24,625	0/0:10,0:10:30.10:0,30,783	0/0:11,0:11:30.10:0,30,800	0/0:11,0:11:29.77:0,30,802	0/0:12,0:12:30.10:0,30,776	0/0:16,0:16:48.16:0,48,1266	0/0:4,0:4:6.02:0,6,154	0/0:18,0:18:48.74:0,49,1023	0/0:20,0:20:60.19:0,60,1202	0/0:10,0:9:23.47:0,23,560	0/0:15,0:15:42.14:0,42,1105	0/0:15,0:14:42.14:0,42,1114	0/0:11,0:10:22.62:0,23,628	0/0:6,0:6:18.06:0,18,482	0/0:22,0:20:57.19:0,57,1475	0/0:14,0:13:35.35:0,35,888	0/0:24,0:21:34.26:0,34,1025
chr10	30836866	.	A	AG	1631.98	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.810;DP=621;FS=12.263;HRun=3;HaplotypeScore=77.8438;InbreedingCoeff=0.9981;MQ=91.05;MQ0=0;MQRankSum=-2.846;QD=32.00;ReadPosRankSum=-1.150;VQSLOD=2.3348;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:93.28:0,93,1115	1/1:1,8:9:27.08:363,27,0	0/0:27,0:27:62.21:0,62,712	0/0:24,0:24:66.18:0,66,764	0/0:28,0:28:72.21:0,72,851	0/0:29,0:29:87.27:0,87,1044	0/0:25,0:25:63.18:0,63,744	0/0:30,0:30:69.19:0,69,810	0/0:15,0:15:42.13:0,42,504	1/1:1,21:22:60.14:784,60,0	1/1:3,17:20:45.15:628,45,0	0/0:17,0:17:51.16:0,51,611	0/0:20,0:20:54.14:0,54,635	0/0:18,0:18:48.13:0,48,563	0/0:22,0:22:60.18:0,60,720	0/0:20,0:20:60.17:0,60,709	0/0:16,0:16:48.15:0,48,574	0/0:15,0:15:42.13:0,42,504	0/0:34,0:34:93.27:0,93,1105	0/0:17,0:17:45.14:0,45,538	0/0:32,0:32:93.27:0,93,1104	0/0:26,0:26:78.24:0,78,934	0/0:27,0:27:75.23:0,75,899	0/0:19,0:19:57.17:0,57,684	0/0:17,0:17:45.11:0,45,507	0/0:12,0:12:36.11:0,36,432	0/0:36,0:36:99:0,99,1170	0/0:9,0:9:21.06:0,21,247
chr10	30837099	.	TTG	T	1756.30	PASS	AB=0.808;AC=29;AF=0.659;AN=44;BaseQRankSum=2.458;DP=592;FS=5.847;HRun=0;HaplotypeScore=98.8575;InbreedingCoeff=0.3676;MQ=70.36;MQ0=13;MQRankSum=0.985;QD=5.05;ReadPosRankSum=0.995;VQSLOD=2.4912;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:26,3:29:20.65:171,0,21	0/0:3,0:3:3.01:0,3,41	./.	./.	1/1:13,6:20:17.88:176,18,0	1/1:14,6:19:21.55:192,22,0	1/1:15,6:23:11.56:111,12,0	./.	0/1:11,5:16:48.77:49,0,77	0/0:17,0:18:36.85:0,37,334	0/0:17,0:18:17.02:0,17,143	./.	0/1:15,6:21:26.69:27,0,39	1/1:13,5:19:14.87:144,15,0	0/1:22,3:25:11.55:12,0,325	1/1:8,4:13:11.86:111,12,0	1/1:20,9:30:14.87:144,15,0	1/1:9,3:12:6.02:65,6,0	0/0:16,0:13:9.02:0,9,102	./.	0/0:44,0:42:32.71:0,33,400	1/1:7,2:10:14.71:126,15,0	1/1:17,0:21:5.51:28,6,0	0/1:13,7:20:14.62:243,0,15	1/1:11,6:17:6.02:65,6,0	1/1:21,5:26:15.03:155,15,0	1/1:21,3:24:9.02:97,9,0	./.
chr10	30837511	.	CA	C	3154.13	PASS	AB=0.714;AC=40;AF=0.714;AN=56;BaseQRankSum=0.738;DP=477;FS=7.045;HRun=11;HaplotypeScore=62.2868;InbreedingCoeff=0.5738;MQ=54.28;MQ0=15;MQRankSum=0.144;QD=8.17;ReadPosRankSum=4.178;VQSLOD=1.8841;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:10,27:36:22.65:387,23,0	0/0:4,0:4:9.87:0,10,86	0/1:33,1:14:11.22:11,0,72	0/0:26,0:6:11.95:0,12,97	1/1:6,11:17:28.88:220,29,0	0/1:6,12:18:8.01:148,0,8	1/1:4,9:13:20.95:172,21,0	1/1:10,16:26:15.87:335,16,0	0/0:12,0:12:14.91:0,15,135	0/0:22,0:22:50.88:0,51,497	0/0:11,0:11:17.99:0,18,172	1/1:6,9:17:18.94:135,19,0	1/1:6,5:11:11.93:98,12,0	1/1:6,8:14:17.95:147,18,0	0/0:15,0:15:20.09:0,20,279	1/1:5,9:14:17.95:148,18,0	1/1:10,14:24:14.36:249,14,0	1/1:6,8:13:14.93:123,15,0	1/1:12,0:16:19.14:70,19,0	1/1:0,0:10:14.26:42,14,0	1/1:4,0:6:4.07:12,4,0	1/1:6,7:13:12.93:162,13,0	0/1:7,6:13:17.11:83,0,17	1/1:9,13:20:5.05:175,5,0	1/1:2,13:15:26.96:222,27,0	0/1:6,12:18:28.07:210,0,28	1/1:7,10:17:17.74:146,18,0	1/1:5,6:10:5.99:49,6,0
chr10	30837819	.	TA	T	11835.03	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=8.263;DP=473;FS=1.701;HRun=1;HaplotypeScore=45.1313;InbreedingCoeff=0.9960;MQ=59.34;MQ0=0;MQRankSum=-0.788;QD=35.97;ReadPosRankSum=2.891;VQSLOD=4.7513;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,19:19:45.15:628,45,0	0/0:7,0:7:21.05:0,21,304	0/0:11,0:11:33.07:0,33,462	0/0:13,0:12:26.10:0,26,421	1/1:0,23:23:63.21:870,63,0	1/1:0,17:17:45.15:629,45,0	1/1:0,22:22:48.16:670,48,0	1/1:0,27:27:81.20:1058,81,0	0/0:14,0:14:42.14:0,42,670	0/0:17,0:17:51.17:0,51,814	0/0:17,0:17:39.03:0,39,568	1/1:0,12:12:33.11:461,33,0	1/1:0,11:11:30.07:398,30,0	1/1:0,10:10:21.07:292,21,0	0/0:14,0:14:42.14:0,42,671	1/1:0,14:14:36.08:473,36,0	1/1:1,28:29:69.23:964,69,0	1/1:0,24:24:63.21:875,63,0	0/0:24,0:24:60.17:0,60,911	0/0:16,0:16:45.15:0,45,708	0/0:11,0:11:33.08:0,33,480	1/1:0,10:10:27.09:377,27,0	1/1:0,12:12:36.12:502,36,0	1/1:0,12:12:36.12:497,36,0	1/1:0,17:17:42.14:586,42,0	1/1:2,35:37:15.42:1352,15,0	1/1:0,20:20:54.17:741,54,0	1/1:0,13:13:33.11:461,33,0
chr10	30839208	.	G	GA	385.21	PASS	AB=1.000;AC=31;AF=0.912;AN=34;BaseQRankSum=3.256;DP=55;FS=8.808;HRun=0;HaplotypeScore=84.7761;InbreedingCoeff=0.2145;MQ=116.38;MQ0=0;MQRankSum=-3.466;QD=8.37;ReadPosRankSum=1.659;VQSLOD=2.7999;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,3:3:8.12:38,8,0	./.	0/1:5,0:6:4.60:5,0,17	0/0:6,0:5:8.68:0,9,65	./.	1/1:0,1:1:2.90:16,3,0	./.	./.	1/1:0,2:2:5.10:22,5,0	1/1:0,2:2:2.96:19,3,0	1/1:0,3:3:5.60:26,6,0	1/1:2,4:6:14.37:76,14,0	1/1:0,2:2:5.75:30,6,0	1/1:0,2:2:5.78:31,6,0	1/1:1,0:1:2.80:13,3,0	1/1:0,2:2:5.78:31,6,0	1/1:0,1:1:2.88:15,3,0	./.	./.	./.	./.	1/1:0,2:2:2.90:16,3,0	1/1:1,2:3:2.88:15,3,0	./.	1/1:0,5:5:8.63:45,9,0	./.	1/1:0,5:5:14.43:84,14,0	./.
chr10	30839217	.	CT	C	535.57	PASS	AB=0.833;AC=35;AF=0.921;AN=38;BaseQRankSum=3.276;DP=65;FS=10.969;HRun=2;HaplotypeScore=90.4786;InbreedingCoeff=0.2038;MQ=112.07;MQ0=0;MQRankSum=-3.031;QD=9.40;ReadPosRankSum=0.999;VQSLOD=0.3184;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,5:5:13.27:64,13,0	./.	0/1:4,1:5:7.78:8,0,25	0/0:8,0:7:7.26:0,7,71	1/1:0,3:3:2.96:19,3,0	1/1:0,2:2:5.55:29,6,0	1/1:0,2:2:3.01:36,3,0	./.	1/1:0,2:2:2.43:9,2,0	1/1:0,2:2:2.80:13,3,0	1/1:0,3:3:7.40:34,7,0	1/1:0,7:7:19.14:126,19,0	1/1:1,2:3:4.99:18,5,0	1/1:0,2:2:5.17:19,5,0	1/1:0,1:1:2.96:19,3,0	1/1:0,3:3:8.06:39,8,0	1/1:0,1:1:2.50:9,2,0	./.	./.	./.	./.	1/1:0,2:2:5.55:29,6,0	1/1:0,3:3:8.41:47,8,0	./.	1/1:0,6:6:13.40:65,13,0	./.	1/1:0,5:5:12.84:51,13,0	./.
chr10	30839292	.	AAAAAAAAAAAAAACC	A	1237.40	PASS	AB=1.000;AC=26;AF=0.500;AN=52;BaseQRankSum=0.879;DP=282;FS=21.863;HRun=0;HaplotypeScore=87.8763;InbreedingCoeff=0.0361;MQ=42.22;MQ0=83;MQRankSum=-0.662;QD=8.53;ReadPosRankSum=4.166;VQSLOD=0.0856;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:3:5.58:0,6,27	1/1:4,0:4:12.04:145,12,0	0/0:38,0:10:29.92:0,30,392	0/0:56,0:7:12.14:0,12,198	0/1:13,0:10:24.42:107,0,24	./.	1/1:6,0:4:2.08:99,2,0	0/0:8,0:3:3.26:0,3,10	0/0:5,0:3:1.49:0,1,121	1/1:13,0:9:22.51:279,23,0	1/1:0,7:7:3.01:36,3,0	0/0:7,0:5:5.61:0,6,69	0/1:5,0:3:11.78:12,0,17	0/1:4,0:3:17.05:27,0,17	0/0:8,0:6:9.38:0,9,260	0/0:3,0:1:2.50:0,2,9	1/1:13,0:7:5.89:127,6,0	0/1:8,0:6:99:139,0,138	1/1:5,0:1:3.01:34,3,0	1/1:9,0:4:8.99:85,9,0	./.	0/1:7,0:7:24.61:54,0,25	0/1:4,0:4:3.42:30,0,3	0/1:9,0:6:12.34:96,0,12	0/1:5,0:3:10.89:28,0,11	0/1:6,0:5:28.61:29,0,58	0/1:5,0:3:2.89:32,0,3	1/1:22,0:2:3.01:37,3,0
chr10	30839325	.	CA	C	1485.21	PASS	AB=0.959;AC=40;AF=0.741;AN=54;BaseQRankSum=0.372;DP=214;FS=15.631;HRun=1;HaplotypeScore=49.0968;InbreedingCoeff=0.3266;MQ=65.91;MQ0=10;MQRankSum=-0.218;QD=8.12;ReadPosRankSum=0.151;VQSLOD=-0.7230;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,1:4:5.93:54,6,0	0/0:4,0:4:12.04:0,12,179	0/1:48,1:19:6:6,0,225	0/1:49,0:13:4.90:5,0,153	1/1:0,3:3:6.02:65,6,0	1/1:0,3:3:6.02:72,6,0	1/1:0,3:3:9.03:110,9,0	1/1:4,2:6:11.74:84,12,0	0/1:4,0:4:9.11:29,0,9	0/0:11,0:11:30.07:0,30,397	0/0:9,0:9:6.02:0,6,84	1/1:0,2:2:6.02:76,6,0	./.	0/0:2,0:1:1.25:0,1,3	0/1:5,1:6:12.83:13,0,23	1/1:1,2:3:4.31:70,4,0	1/1:3,3:6:7.84:79,8,0	1/1:2,3:5:0.81:99,1,0	1/1:2,4:5:11.90:119,12,0	1/1:0,7:10:23.88:228,24,0	1/1:3,3:7:11.87:140,12,0	1/1:0,2:2:6.01:63,6,0	1/1:0,1:1:3.01:36,3,0	1/1:2,4:6:7.93:78,8,0	1/1:0,1:1:3.01:36,3,0	0/0:3,0:2:3.01:0,3,45	1/1:0,5:5:12.04:143,12,0	1/1:1,0:1:3.01:32,3,0
chr10	30839362	.	A	AC	3146.80	PASS	AB=0.972;AC=44;AF=0.786;AN=56;BaseQRankSum=-6.243;DP=400;FS=36.230;HRun=0;HaplotypeScore=74.1977;InbreedingCoeff=0.4602;MQ=45.23;MQ0=21;MQRankSum=2.437;QD=9.74;ReadPosRankSum=6.965;VQSLOD=1.6418;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:22:36.44:271,36,0	0/1:7,1:8:0.17:93,0,0	0/0:34,0:8:19.64:0,20,149	0/0:23,0:8:4.02:0,4,47	1/1:6,6:12:4.04:46,4,0	1/1:12,0:11:20.11:125,20,0	1/1:17,0:16:27.88:190,28,0	1/1:24,2:18:19.60:251,20,0	0/0:9,0:6:9.77:0,10,65	0/1:17,0:16:37.82:93,0,38	1/1:19,0:18:0.10:92,0,0	1/1:11,0:11:23.35:154,23,0	1/1:11,0:11:23.50:172,24,0	1/1:8,0:9:9.79:95,10,0	0/0:11,0:11:11.94:0,12,93	1/1:10,0:10:9.82:85,10,0	1/1:13,0:12:26.26:180,26,0	1/1:8,0:6:1.62:78,2,0	1/1:7,0:7:5.89:38,6,0	0/1:20,0:20:0.88:205,0,1	1/1:20,0:17:27.19:227,27,0	1/1:10,0:9:0.69:72,1,0	1/1:9,0:9:17.62:134,18,0	1/1:15,0:13:15.62:114,16,0	1/1:14,0:14:16.03:155,16,0	1/1:16,0:13:22.58:240,23,0	1/1:13,0:13:19.61:139,20,0	0/1:3,0:3:0.07:46,0,0
chr10	30839502	.	A	AACAC	344.12	PASS	AB=1.000;AC=15;AF=0.300;AN=50;BaseQRankSum=-1.857;DP=545;FS=9.478;HRun=0;HaplotypeScore=112.8232;InbreedingCoeff=0.3865;MQ=62.28;MQ0=11;MQRankSum=0.822;QD=1.79;ReadPosRankSum=-3.593;VQSLOD=0.5471;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:4.77:0,5,32	./.	./.	./.	0/0:21,0:21:14.24:0,14,158	0/0:19,0:19:0:0,0,176	0/0:35,0:32:0.68:0,1,2	1/1:28,0:26:1.82:5,2,0	0/0:14,0:14:29.01:0,29,355	1/1:22,0:21:11.59:95,12,0	0/0:11,0:11:6:0,6,55	0/0:17,0:17:0.47:0,0,1	0/1:20,0:20:9.55:10,0,47	1/1:14,0:14:1.41:10,1,0	0/0:18,0:19:27.07:0,27,377	0/0:20,0:20:20.96:0,21,180	0/1:37,0:36:8.07:8,0,98	0/1:12,0:12:4.06:24,0,4	1/1:9,4:13:15.35:152,15,0	1/1:8,3:13:8.68:100,9,0	1/1:18,11:32:5.75:83,6,0	0/0:18,0:18:3:0,3,28	0/0:16,0:16:3:0,3,28	0/0:17,0:16:3.47:0,3,29	0/0:10,0:10:6.01:0,6,55	0/0:12,0:11:1.36:0,1,4	0/0:16,0:15:9.01:0,9,84	0/0:6,0:6:6.01:0,6,56
chr10	30839536	.	CACACACAA	C	2152.83	PASS	AB=0.991;AC=17;AF=0.315;AN=54;BaseQRankSum=2.593;DP=589;FS=0.483;HRun=0;HaplotypeScore=135.8186;InbreedingCoeff=-0.0788;MQ=54.14;MQ0=8;MQRankSum=1.161;QD=6.43;ReadPosRankSum=-0.544;VQSLOD=2.3224;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:36,1:37:21.20:21,0,83	./.	0/0:25,0:11:29.38:0,29,292	0/0:25,0:19:42.89:0,43,527	0/1:23,0:23:47.62:48,0,110	0/1:22,0:22:60.21:60,0,196	0/0:27,1:27:0.90:0,1,2	0/1:27,0:24:33.26:335,0,33	0/0:19,0:19:51.08:0,51,1300	1/1:3,16:18:47.91:732,48,0	1/1:1,18:19:5.02:167,5,0	0/0:22,0:22:3.47:0,3,26	0/0:18,0:18:16.13:0,16,117	0/0:17,0:17:1.55:0,2,5	0/0:27,0:27:66.12:0,66,1524	0/1:24,0:24:86.06:86,0,98	0/1:45,0:44:83.25:83,0,102	0/1:16,0:16:99:178,0,101	0/0:17,0:15:38.79:0,39,530	0/0:12,0:12:29.99:0,30,517	0/0:37,0:36:47.25:0,47,718	0/1:20,0:20:99:113,0,138	0/1:18,0:18:1.45:15,0,1	0/1:18,0:17:6.64:149,0,7	0/1:9,1:10:3.19:105,0,3	0/1:18,0:16:59.14:160,0,59	0/1:19,0:18:16.70:58,0,17	0/0:6,0:6:5.72:0,6,29
chr10	30839538	.	CACACAA	C	2959.28	PASS	AB=0.968;AC=36;AF=0.667;AN=54;BaseQRankSum=6.918;DP=580;FS=24.325;HRun=0;HaplotypeScore=119.2679;InbreedingCoeff=0.6203;MQ=54.36;MQ0=7;MQRankSum=1.032;QD=7.06;ReadPosRankSum=3.296;VQSLOD=0.3745;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:38,0:38:17.94:20,0,18	./.	0/0:26,0:12:32.39:0,32,338	0/0:25,0:19:42.89:0,43,522	1/1:25,0:25:7.12:222,7,0	1/1:21,0:21:17.18:224,17,0	1/1:11,16:26:3.86:55,4,0	1/1:26,0:24:31.89:443,32,0	0/0:19,0:19:54.08:0,54,1098	1/1:18,0:17:46.72:423,47,0	1/1:18,0:18:5.23:100,5,0	0/1:22,0:22:0.11:0,0,1	0/1:19,1:20:8.84:56,0,9	1/1:17,0:17:2.49:40,2,0	0/0:27,0:27:59.83:0,60,1159	0/1:21,2:23:0.80:158,0,1	1/1:43,0:42:16.03:104,16,0	1/1:16,0:16:10.54:205,11,0	0/0:15,0:13:38.75:0,39,464	0/0:12,0:12:27.02:0,27,401	0/0:36,0:35:40.78:0,41,549	1/1:18,1:19:5.66:206,6,0	1/1:17,0:17:4.95:42,5,0	1/1:19,0:18:31.90:261,32,0	1/1:10,0:10:11.22:137,11,0	1/1:18,0:16:30.20:285,30,0	1/1:15,1:16:14.42:142,14,0	1/1:6,0:6:5.42:23,5,0
chr10	30839540	.	CACAA	C	4792.96	PASS	AB=0.917;AC=39;AF=0.722;AN=54;BaseQRankSum=6.192;DP=575;FS=22.255;HRun=0;HaplotypeScore=101.5738;InbreedingCoeff=0.7477;MQ=55.46;MQ0=6;MQRankSum=0.360;QD=11.69;ReadPosRankSum=3.165;VQSLOD=2.4807;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,28:36:4.32:72,4,0	./.	0/0:29,0:15:41.38:0,41,392	0/0:26,0:20:45.88:0,46,540	1/1:21,5:26:36.51:482,37,0	1/1:14,6:20:43.76:576,44,0	1/1:25,0:25:3.11:32,3,0	1/1:26,0:24:60.66:469,61,0	0/0:19,0:19:54.08:0,54,920	1/1:18,0:17:41.26:327,41,0	1/1:18,0:18:5.09:72,5,0	1/1:3,18:21:1.49:34,1,0	1/1:3,16:19:11.08:170,11,0	1/1:1,15:16:1.07:14,1,0	0/0:26,0:26:51.95:0,52,893	1/1:4,19:23:24.08:407,24,0	1/1:7,33:39:21.24:310,21,0	1/1:15,1:16:35.78:321,36,0	0/0:15,0:13:35.74:0,36,357	0/0:13,0:13:29.98:0,30,359	0/0:36,0:35:40.78:0,41,496	1/1:17,2:19:32.96:310,33,0	1/1:2,15:17:2.63:55,3,0	1/1:18,1:18:35.64:322,36,0	0/1:10,1:10:0.49:129,0,0	1/1:18,0:17:41.90:423,42,0	1/1:3,13:16:10:153,10,0	1/1:0,6:6:6.02:113,6,0
chr10	30839542	.	CAA	C	3449.13	PASS	AC=40;AF=0.741;AN=54;BaseQRankSum=7.990;DP=552;FS=25.428;HRun=3;HaplotypeScore=89.4281;InbreedingCoeff=0.7777;MQ=55.71;MQ0=6;MQRankSum=-0.147;QD=8.89;ReadPosRankSum=3.010;VQSLOD=-0.7502;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:31,1:32:5.63:42,6,0	./.	0/0:31,0:17:47.39:0,47,448	0/0:27,0:21:48.84:0,49,514	1/1:26,1:27:36.30:318,36,0	1/1:20,0:20:44.44:355,44,0	1/1:19,0:19:5.02:35,5,0	1/1:3,22:23:58.69:487,59,0	0/0:19,0:19:54.03:0,54,711	1/1:17,0:17:39.28:323,39,0	1/1:18,0:18:5.06:44,5,0	1/1:19,0:19:2.92:17,3,0	1/1:17,0:17:8.77:69,9,0	1/1:15,0:15:2.43:12,2,0	0/0:24,0:24:33.59:0,34,689	1/1:22,0:22:23.90:196,24,0	1/1:36,1:37:21.33:163,21,0	1/1:15,1:16:35.75:275,36,0	0/0:15,0:12:28.03:0,28,244	0/0:11,0:11:29.98:0,30,308	0/0:36,0:35:47.65:0,48,474	1/1:18,0:18:30.50:217,30,0	1/1:17,0:17:2.82:23,3,0	1/1:19,0:18:33.52:269,34,0	1/1:11,0:10:1.77:81,2,0	1/1:18,0:17:47.86:404,48,0	1/1:15,0:15:8.97:71,9,0	1/1:6,0:6:5.98:47,6,0
chr10	30840237	.	TA	T	14889.78	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=21.205;DP=721;FS=5.217;HRun=3;HaplotypeScore=174.6677;InbreedingCoeff=0.9991;MQ=93.34;MQ0=0;MQRankSum=-6.033;QD=32.80;ReadPosRankSum=3.050;VQSLOD=3.6113;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,30:30:75.24:929,75,0	0/0:14,0:14:42.14:0,42,601	0/0:30,0:30:87.28:0,87,1203	0/0:38,0:38:99:0,111,1523	1/1:1,32:33:81.25:1004,81,0	1/1:1,26:27:66.21:818,66,0	1/1:2,27:29:75.24:929,75,0	1/1:2,37:39:99:1375,111,0	0/0:25,0:25:72.19:0,72,997	0/0:20,0:20:57.18:0,57,804	0/0:29,0:29:87.26:0,87,1202	1/1:1,26:27:75.24:930,75,0	1/1:1,27:28:81.25:1003,81,0	1/1:2,19:21:45.01:557,45,0	0/0:31,0:31:87.29:0,87,1253	1/1:0,24:24:66.21:818,66,0	1/1:0,32:32:81.25:1004,81,0	1/1:0,10:10:24.07:298,24,0	0/0:24,0:24:69.23:0,69,979	0/0:23,0:23:69.22:0,69,975	0/0:33,0:33:99:0,99,1422	1/1:0,22:22:63.20:781,63,0	1/1:0,31:31:78.24:966,78,0	1/1:0,30:30:81.25:1004,81,0	1/1:0,17:17:42.13:520,42,0	1/1:0,20:20:60.17:728,60,0	1/1:1,26:27:78.24:966,78,0	1/1:0,7:7:21.07:260,21,0
chr10	30840619	.	AT	A	8246.63	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=1.126;DP=549;FS=2.110;HRun=9;HaplotypeScore=64.2276;InbreedingCoeff=0.9849;MQ=82.31;MQ0=1;MQRankSum=-2.332;QD=22.47;ReadPosRankSum=3.985;VQSLOD=5.6835;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,20:21:54.03:494,54,0	0/0:2,0:12:28.57:0,29,156	0/0:22,1:22:18.24:0,18,328	0/0:14,0:14:10.79:0,11,213	1/1:2,28:30:84.04:769,84,0	1/1:1,20:21:51.03:467,51,0	1/1:2,19:21:45.02:412,45,0	1/1:4,20:24:56.99:512,57,0	0/0:16,0:16:42.11:0,42,475	0/0:2,0:20:50.33:0,50,251	0/0:3,0:27:68.39:0,68,355	1/1:0,17:17:45.02:412,45,0	1/1:1,12:13:36.02:329,36,0	1/1:1,17:18:25.59:365,26,0	0/0:16,0:16:48.14:0,48,554	1/1:3,18:21:10.40:350,10,0	1/1:0,27:27:69.04:632,69,0	1/1:4,10:14:27:247,27,0	0/0:17,0:17:51.13:0,51,570	0/0:24,0:24:66.19:0,66,753	0/0:12,0:12:24.07:0,24,277	1/1:4,18:22:50.98:458,51,0	1/1:2,20:22:54.03:494,54,0	1/1:1,16:17:45.02:412,45,0	1/1:0,24:24:66.04:604,66,0	1/1:0,24:24:72.04:659,72,0	1/1:5,17:22:48.01:439,48,0	1/1:1,8:9:21.01:192,21,0
chr10	30841350	.	T	TACACACACACAC	17522.43	PASS	AB=0.667;AC=47;AF=0.839;AN=56;BaseQRankSum=2.382;DP=732;FS=3.861;HRun=0;HaplotypeScore=265.8221;InbreedingCoeff=0.8087;MQ=62.52;MQ0=5;MQRankSum=-7.001;QD=28.87;ReadPosRankSum=-1.428;VQSLOD=3.4849;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:36,5:45:18.50:879,19,0	1/1:2,0:6:7.19:24,7,0	0/0:37,0:26:24.08:0,24,585	0/0:48,0:34:27.07:0,27,592	1/1:17,8:26:24.08:1353,24,0	1/1:26,0:26:18.03:408,18,0	1/1:30,0:30:27.04:688,27,0	1/1:26,0:25:39.11:1056,39,0	0/0:17,0:19:39.12:0,39,1082	1/1:19,0:28:40.99:579,41,0	1/1:9,0:15:9.03:126,9,0	1/1:13,6:21:24.55:1068,25,0	1/1:21,2:23:12.04:565,12,0	1/1:14,8:26:21.07:1106,21,0	0/0:19,0:19:45.14:0,45,1479	1/1:25,4:31:21.54:1030,22,0	1/1:15,2:22:15.52:489,16,0	1/1:13,0:14:15.52:518,16,0	1/1:21,0:28:26.40:535,26,0	1/1:15,0:26:21.07:542,21,0	0/1:15,0:30:3.49:3,0,30	1/1:28,2:32:6.02:350,6,0	1/1:17,2:23:8.58:481,9,0	1/1:25,7:36:32.88:1800,33,0	1/1:19,4:25:9.02:474,9,0	1/1:23,4:28:28.49:1514,28,0	1/1:19,5:27:27.07:1091,27,0	1/1:6,2:9:18.06:842,18,0
chr10	30842751	.	T	TTTC	24894.24	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=7.429;DP=679;FS=5.732;HRun=0;HaplotypeScore=112.5466;InbreedingCoeff=0.9996;MQ=86.48;MQ0=0;MQRankSum=-7.952;QD=55.32;ReadPosRankSum=2.978;VQSLOD=7.2329;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,27:32:75.26:1674,75,0	0/0:18,0:18:54.17:0,54,858	0/0:23,0:23:60.12:0,60,914	0/0:27,0:27:66.20:0,66,997	1/1:4,36:41:93.32:2046,93,0	1/1:2,18:20:48.16:1071,48,0	1/1:4,26:31:72.20:1606,72,0	1/1:3,23:26:72.23:1517,72,0	0/0:27,0:27:75.25:0,75,1195	0/0:25,0:25:75.26:0,75,1225	0/0:20,0:20:54.18:0,54,882	1/1:2,14:16:39.13:865,39,0	1/1:1,16:17:42.14:938,42,0	1/1:4,19:24:54.19:1191,54,0	0/0:27,0:27:81.28:0,81,1323	1/1:1,23:26:23.49:1492,23,0	1/1:3,27:29:69.24:1542,69,0	1/1:3,23:26:69.24:1506,69,0	0/0:22,0:22:60.19:0,60,935	0/0:22,0:22:66.22:0,66,1049	0/0:18,0:18:51.17:0,51,831	1/1:0,26:26:75.26:1674,75,0	1/1:3,22:25:63.21:1376,63,0	1/1:0,18:18:47.83:1071,48,0	1/1:2,15:17:45.15:1004,45,0	1/1:2,21:24:46.34:1409,46,0	1/1:3,32:36:96.33:2108,96,0	1/1:1,13:14:36.12:804,36,0
chr10	30846158	.	ACGTGCACGCACG	A	7128.07	PASS	AB=0.778;AC=33;AF=0.611;AN=54;BaseQRankSum=8.672;DP=509;FS=5.722;HRun=0;HaplotypeScore=147.3451;InbreedingCoeff=0.8050;MQ=65.84;MQ0=4;MQRankSum=-9.599;QD=27.10;ReadPosRankSum=1.210;VQSLOD=3.6445;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:9,0:9:24.08:0,24,787	0/0:21,0:13:35.97:0,36,608	0/0:23,0:15:36.12:0,36,915	0/1:5,2:7:0:0,0,0	1/1:11,2:13:21.07:643,21,0	1/1:5,20:25:12.04:430,12,0	1/1:2,13:15:38.97:885,39,0	0/0:21,0:21:60.21:0,60,2563	0/0:22,0:22:63.22:0,63,2462	0/0:15,0:15:33.58:0,34,1146	1/1:5,14:19:21.07:767,21,0	1/1:0,11:11:6.02:228,6,0	1/1:3,19:22:24.55:815,25,0	0/0:24,0:24:69.24:0,69,3080	1/1:1,15:16:9.03:342,9,0	1/1:14,0:14:3.01:100,3,0	1/1:13,0:12:6.02:165,6,0	0/0:19,0:18:39.13:0,39,1160	0/0:12,0:12:27.09:0,27,943	0/0:56,0:55:99:0,110,4264	1/1:1,12:13:2.55:98,3,0	1/1:9,1:10:4.26:56,4,0	1/1:2,26:28:12.04:454,12,0	1/1:2,12:14:1.49:162,1,0	1/1:2,14:16:30.10:1002,30,0	1/1:2,22:24:21.69:762,22,0	1/1:0,3:3:6.02:221,6,0
chr10	30846159	.	CGT	C	1422.07	PASS	AC=30;AF=0.556;AN=54;BaseQRankSum=11.201;DP=498;FS=8.229;HRun=0;HaplotypeScore=107.6096;InbreedingCoeff=0.8001;MQ=65.96;MQ0=4;MQRankSum=-9.261;QD=5.98;ReadPosRankSum=2.710;VQSLOD=2.6818;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:9,0:9:24.08:0,24,453	0/0:21,0:13:36.09:0,36,568	0/0:23,0:15:36.12:0,36,672	0/0:7,0:7:0:0,0,0	1/1:11,2:13:20.88:213,21,0	1/1:23,1:24:11.71:89,12,0	1/1:13,0:13:29.95:345,30,0	0/0:20,0:20:60.21:0,60,1134	0/0:22,0:22:63.22:0,63,1193	0/0:14,0:14:33.11:0,33,616	1/1:17,0:18:20.36:123,20,0	1/1:11,0:11:5.85:34,6,0	1/1:22,0:22:20.04:115,20,0	0/0:24,0:24:69.24:0,69,1288	1/1:15,0:15:8.77:51,9,0	1/1:14,0:14:2.97:20,3,0	1/1:1,10:11:6.02:82,6,0	0/0:17,0:16:39.13:0,39,731	0/0:13,0:13:29.38:0,29,518	0/0:55,0:54:99:0,112,2058	1/1:13,0:13:1.91:17,2,0	0/0:10,0:10:0:0,0,0	1/1:28,0:28:11.32:83,11,0	1/1:12,2:14:2.24:16,2,0	1/1:15,0:15:29.80:275,30,0	1/1:24,0:23:20.19:124,20,0	1/1:3,0:3:5.83:33,6,0
chr10	30846160	.	GTGCACGCACGCGCA	G	5569.51	PASS	AB=0.792;AC=32;AF=0.593;AN=54;BaseQRankSum=9.755;DP=486;FS=3.975;HRun=0;HaplotypeScore=155.1668;InbreedingCoeff=0.7580;MQ=66.21;MQ0=4;MQRankSum=-9.617;QD=22.73;ReadPosRankSum=1.753;VQSLOD=3.5155;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:9,0:9:24.08:0,24,840	0/0:21,0:13:35.97:0,36,610	0/0:22,0:14:36.12:0,36,936	0/1:2,5:7:0.07:0,0,0	1/1:10,0:12:21.07:602,21,0	1/1:21,0:22:12.51:301,13,0	1/1:13,0:13:14.65:822,15,0	0/0:21,0:21:63.22:0,63,2815	0/0:21,0:21:63.22:0,63,2576	0/0:15,0:15:37.07:0,37,1327	1/1:15,2:17:21:608,21,0	1/1:11,0:11:6.02:138,6,0	1/1:19,1:20:23.91:535,24,0	0/0:25,0:25:72.25:0,72,3489	1/1:15,0:15:9.03:207,9,0	1/1:0,14:14:3.01:132,3,0	1/1:10,0:9:6.02:165,6,0	0/0:15,0:14:39.13:0,39,1174	0/0:14,0:14:33.06:0,33,1122	0/0:54,0:53:99:0,110,4468	1/1:12,1:13:2.66:131,3,0	1/1:1,8:10:2.84:9,3,0	1/1:26,0:26:12.04:276,12,0	0/1:14,0:14:24.25:76,0,24	1/1:14,0:14:30.10:825,30,0	1/1:22,2:23:20.86:611,21,0	1/1:3,0:3:6.02:131,6,0
chr10	30846172	.	GCA	G	1145.14	PASS	AB=0.949;AC=24;AF=0.462;AN=52;BaseQRankSum=1.365;DP=584;FS=0.679;HRun=0;HaplotypeScore=133.2504;InbreedingCoeff=0.2484;MQ=48.74;MQ0=8;MQRankSum=2.252;QD=3.49;ReadPosRankSum=2.677;VQSLOD=2.5898;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:28:9.01:9,0,30	1/1:9,2:11:17.90:149,18,0	./.	./.	0/0:13,0:13:6.45:0,6,86	1/1:15,0:14:5.75:28,6,0	0/0:26,0:26:7.17:0,7,42	0/0:17,0:17:13.10:0,13,87	1/1:8,21:29:35.97:387,36,0	1/1:11,15:25:44.20:466,44,0	0/1:6,13:20:10.12:117,0,10	0/1:18,0:18:13.03:29,0,13	0/0:18,0:17:4.33:0,4,23	1/1:23,0:23:6.18:31,6,0	0/0:27,0:27:10.55:0,11,426	1/1:18,0:18:3.84:24,4,0	0/1:22,0:21:3.78:4,0,66	0/0:11,0:10:9.80:0,10,64	0/0:15,0:14:3.01:0,3,43	0/0:7,0:18:12.52:0,13,78	0/0:65,0:64:7.60:0,8,266	0/1:14,0:14:11.57:12,0,19	0/1:18,0:18:4.94:5,0,46	0/1:34,0:34:6.94:7,0,21	0/1:22,0:22:7.56:8,0,94	0/0:19,0:19:19.61:0,20,164	1/1:25,0:24:2.72:32,3,0	1/1:4,0:4:0.69:2,1,0
chr10	30846660	.	GA	G	3651.70	PASS	AB=0.625;AC=47;AF=0.839;AN=56;BaseQRankSum=9.088;DP=593;FS=10.283;HRun=11;HaplotypeScore=143.0801;InbreedingCoeff=0.8322;MQ=76.64;MQ0=0;MQRankSum=-7.777;QD=7.19;ReadPosRankSum=3.112;VQSLOD=0.9218;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:42,0:42:66.99:195,67,0	0/1:2,2:5:17.97:63,0,18	0/0:24,1:25:14.33:0,14,319	0/0:20,0:18:19.57:0,20,325	1/1:22,0:22:31.70:93,32,0	1/1:24,0:24:40.74:118,41,0	1/1:17,0:17:28.52:83,29,0	1/1:33,0:33:46.75:137,47,0	0/0:18,1:19:23.46:0,23,447	1/1:4,24:28:42.91:556,43,0	1/1:4,11:16:10.78:228,11,0	1/1:25,0:25:43.66:127,44,0	1/1:23,0:24:33.06:96,33,0	1/1:18,0:18:30.56:89,31,0	0/0:21,0:21:54.13:0,54,569	1/1:15,0:15:20.36:59,20,0	1/1:23,0:23:16.27:47,16,0	1/1:19,0:19:36.66:107,37,0	1/1:4,16:20:47.93:394,48,0	1/1:1,11:12:32.96:271,33,0	1/1:4,23:27:53.93:443,54,0	1/1:22,0:22:26.25:77,26,0	1/1:20,0:20:22.34:65,22,0	1/1:25,0:25:32.84:95,33,0	1/1:21,0:21:13.76:61,14,0	1/1:25,1:26:45.77:149,46,0	1/1:19,0:19:24.44:71,24,0	1/1:5,0:5:10.19:30,10,0
chr10	30846667	.	AAAAAT	A	18300.77	PASS	AB=0.519;AC=35;AF=0.625;AN=56;BaseQRankSum=-2.733;DP=561;FS=17.810;HRun=0;HaplotypeScore=129.0549;InbreedingCoeff=0.9199;MQ=78.17;MQ0=0;MQRankSum=-8.784;QD=49.46;ReadPosRankSum=4.650;VQSLOD=4.1162;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,41:41:99:2083,102,0	0/0:6,0:6:18.05:0,18,316	0/0:25,0:25:59.52:0,60,1495	0/0:19,0:17:26.25:0,26,1059	1/1:0,22:22:51.07:1016,51,0	1/1:0,21:21:60.21:1250,60,0	1/1:0,16:16:42.14:873,42,0	1/1:0,31:31:93.17:1647,93,0	0/0:18,0:18:54.19:0,54,1626	0/0:28,0:28:81.27:0,81,1583	0/0:14,0:14:42.14:0,42,808	1/1:0,24:24:66.23:1371,66,0	1/1:1,18:19:49.07:1041,49,0	1/1:0,17:17:45.15:939,45,0	0/0:22,0:22:66.21:0,66,1896	1/1:0,13:13:30.10:626,30,0	1/1:0,17:17:27.02:520,27,0	1/1:0,19:19:54.19:1128,54,0	0/0:20,0:20:60.17:0,60,1040	0/0:13,0:13:38.77:0,39,683	0/0:26,0:26:63.20:0,63,1223	1/1:0,19:19:47.97:865,48,0	1/1:0,18:18:38.61:723,39,0	1/1:1,23:25:51.58:1021,52,0	1/1:1,19:20:42.14:858,42,0	0/1:2,25:27:66.99:1279,0,67	1/1:0,16:16:36.12:750,36,0	1/1:0,5:5:15.05:313,15,0
chr10	30846958	.	ATGCGTGCGTGCG	A	13881.15	PASS	AC=34;AF=0.654;AN=52;BaseQRankSum=9.159;DP=538;FS=3.952;HRun=0;HaplotypeScore=189.6267;InbreedingCoeff=0.8548;MQ=53.59;MQ0=1;MQRankSum=-8.953;QD=38.67;ReadPosRankSum=-0.475;VQSLOD=4.3287;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:25,8:33:12.04:417,12,0	./.	0/0:17,0:13:6.02:0,6,87	0/0:17,0:14:9.03:0,9,189	1/1:11,10:21:21.07:706,21,0	1/1:11,12:23:30.10:1043,30,0	1/1:12,5:17:12.04:417,12,0	./.	0/0:26,0:26:45.11:0,45,2137	0/0:10,0:11:18.06:0,18,687	0/0:8,0:8:9.03:0,9,366	1/1:12,15:27:39.13:1356,39,0	1/1:9,12:21:29.97:1028,30,0	1/1:11,19:30:42.14:1461,42,0	0/0:21,0:21:27.09:0,27,1587	1/1:5,15:20:33.11:1137,33,0	1/1:12,7:19:9:312,9,0	1/1:12,9:21:18.06:626,18,0	0/0:21,0:21:6.01:0,6,133	0/0:6,0:8:3.01:0,3,156	0/0:35,0:35:23.30:0,23,725	1/1:10,14:24:33.11:1121,33,0	1/1:11,6:17:9.03:284,9,0	1/1:13,11:24:18.06:625,18,0	1/1:7,16:23:39.13:1356,39,0	1/1:10,10:20:30.10:966,30,0	1/1:6,9:15:27.09:918,27,0	1/1:1,3:4:3.01:104,3,0
chr10	30848098	.	AT	A	11445.56	PASS	AB=0.556;AC=35;AF=0.625;AN=56;BaseQRankSum=6.314;DP=508;FS=1.531;HRun=1;HaplotypeScore=56.0418;InbreedingCoeff=0.9214;MQ=72.83;MQ0=0;MQRankSum=-6.292;QD=35.22;ReadPosRankSum=4.007;VQSLOD=4.7681;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,27:27:66.22:915,66,0	0/0:15,0:15:45.11:0,45,577	0/0:14,0:14:36.08:0,36,445	0/0:13,0:13:36.09:0,36,476	1/1:0,34:34:93.15:1194,93,0	1/1:0,26:26:60.20:834,60,0	1/1:0,9:9:27.09:376,27,0	1/1:0,27:27:81.20:1026,81,0	0/0:12,0:12:36.12:0,36,502	0/0:23,0:23:69.21:0,69,923	0/0:31,0:31:90.28:0,90,1237	1/1:0,10:10:30.10:418,30,0	1/1:2,6:8:17.88:272,18,0	1/1:0,18:18:48.16:667,48,0	0/0:16,0:16:48.14:0,48,652	0/1:2,8:10:62.71:188,0,63	1/1:0,19:19:48.16:667,48,0	1/1:0,9:9:21.07:292,21,0	0/0:19,0:19:57.15:0,57,745	0/0:28,0:28:57.68:0,58,993	0/0:12,0:12:36.10:0,36,483	1/1:1,21:22:66.03:848,66,0	1/1:0,17:17:48.12:645,48,0	1/1:0,13:13:33.11:457,33,0	1/1:0,20:20:45.15:626,45,0	1/1:1,25:26:78.11:1017,78,0	1/1:0,21:21:51.17:709,51,0	1/1:1,8:9:24.03:296,24,0
chr10	30849081	.	TCCACCTCC	T	1086.23	PASS	AB=0.960;AC=14;AF=0.259;AN=54;BaseQRankSum=7.397;DP=219;FS=2.337;HRun=0;HaplotypeScore=85.4793;InbreedingCoeff=-0.3906;MQ=64.77;MQ0=0;MQRankSum=-5.470;QD=8.36;ReadPosRankSum=7.013;VQSLOD=0.8492;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:22:23.24:23,0,255	0/1:5,1:6:54.13:54,0,81	0/0:3,0:2:6.02:0,6,128	0/0:9,0:6:10.59:0,11,172	0/0:11,0:11:13.15:0,13,228	0/1:3,0:3:39.09:42,0,39	0/1:11,0:11:32.64:33,0,165	0/0:7,0:7:12.91:0,13,183	0/0:5,0:5:15.05:0,15,468	0/1:6,4:11:49.27:294,0,49	0/1:8,1:9:61.56:93,0,62	0/0:6,0:6:6.40:0,6,64	0/1:5,0:5:33.07:126,0,33	0/1:6,0:6:33.02:107,0,33	0/0:5,0:6:13.80:0,14,329	0/1:9,0:9:79.98:82,0,80	0/0:12,0:12:14.39:0,14,274	./.	0/0:6,0:6:14.82:0,15,225	0/0:8,0:8:22.90:0,23,256	0/0:7,0:7:7.82:0,8,74	0/1:12,0:12:75.13:75,0,135	0/0:4,0:4:3.70:0,4,86	0/1:9,0:9:25.08:25,0,165	0/1:9,0:9:30.59:31,0,136	0/1:9,0:9:92.47:92,0,162	0/1:9,0:9:99:160,0,157	0/0:5,0:5:14.26:0,14,188
chr10	30851340	.	T	TC	15325.83	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-13.989;DP=583;FS=10.077;HRun=2;HaplotypeScore=52.7698;InbreedingCoeff=0.9998;MQ=88.76;MQ0=0;MQRankSum=-3.664;QD=38.60;ReadPosRankSum=3.470;VQSLOD=4.9116;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,44:50:99:1771,123,0	0/0:14,0:14:42.13:0,42,520	0/0:19,0:19:51.12:0,51,595	0/0:26,0:24:59.56:0,60,713	1/1:0,21:21:60.13:839,60,0	1/1:1,21:22:54.18:778,54,0	1/1:0,23:23:66.22:950,66,0	1/1:1,21:22:60.16:823,60,0	0/0:13,0:13:39.10:0,39,459	0/0:18,0:18:51.16:0,51,632	0/0:17,0:17:51.16:0,51,632	1/1:1,20:21:63.21:904,63,0	1/1:2,14:16:33.11:475,33,0	1/1:1,12:13:30.10:432,30,0	0/0:15,0:15:42.12:0,42,507	1/1:0,16:16:45.15:648,45,0	1/1:0,23:23:66.22:950,66,0	1/1:0,17:17:48.16:689,48,0	0/0:21,0:21:60.16:0,60,720	0/0:23,0:23:69.22:0,69,855	0/0:20,0:20:60.16:0,60,728	1/1:0,14:14:42.14:605,42,0	1/1:3,23:27:57.19:944,57,0	1/1:1,15:16:39.13:562,39,0	1/1:0,19:19:57.19:820,57,0	1/1:1,30:31:56.09:1236,56,0	1/1:0,29:29:81.14:1166,81,0	1/1:0,17:17:51.17:734,51,0
chr10	30851818	.	G	GA	14912.23	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=15.781;DP=574;FS=8.637;HRun=3;HaplotypeScore=196.9801;InbreedingCoeff=0.9997;MQ=70.22;MQ0=0;MQRankSum=-14.842;QD=35.01;ReadPosRankSum=-0.800;VQSLOD=2.4888;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,43:50:99:1523,120,0	1/1:0,12:12:36.12:503,36,0	0/0:17,0:17:44.71:0,45,492	0/0:19,0:19:54.12:0,54,603	1/1:5,17:22:48.07:625,48,0	1/1:3,16:19:54.17:736,54,0	1/1:2,13:15:44.98:556,45,0	1/1:10,20:30:75.18:1002,75,0	0/0:17,0:17:48.15:0,48,576	1/1:2,18:20:56.98:766,57,0	1/1:2,17:19:54.09:710,54,0	1/1:1,20:21:63.21:879,63,0	1/1:5,16:21:54.14:730,54,0	1/1:6,18:24:57.13:752,57,0	0/0:15,0:15:42.13:0,42,504	1/1:3,16:19:48.16:670,48,0	1/1:5,23:27:66.18:891,66,0	1/1:2,10:12:30.10:411,30,0	0/0:23,0:23:60.17:0,60,707	0/0:20,0:20:60.18:0,60,720	0/0:37,0:37:99:0,105,1259	1/1:3,15:18:48.11:631,48,0	1/1:1,16:17:50.99:668,51,0	1/1:5,9:14:35.98:416,36,0	1/1:3,12:15:41.99:536,42,0	1/1:2,16:18:54.18:749,54,0	1/1:4,17:22:57.16:774,57,0	1/1:3,7:10:30.07:382,30,0
chr10	30851838	.	A	AT	12163.21	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=12.580;DP=536;FS=8.496;HRun=0;HaplotypeScore=208.8528;InbreedingCoeff=0.9939;MQ=72.98;MQ0=0;MQRankSum=-15.104;QD=36.20;ReadPosRankSum=1.132;VQSLOD=3.1303;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,41:41:99:1416,105,0	0/0:15,0:15:44.37:0,44,306	0/0:20,0:20:57.12:0,57,756	0/0:12,0:12:29.95:0,30,365	1/1:0,21:22:48.86:669,49,0	1/1:1,15:16:44.86:568,45,0	1/1:0,10:10:30.01:394,30,0	1/1:0,18:18:54.18:772,54,0	0/0:15,0:15:45.13:0,45,611	0/0:17,0:17:50.55:0,51,364	0/0:17,0:17:35.59:0,36,258	1/1:1,18:19:54.17:746,54,0	1/1:0,17:17:44.04:626,44,0	1/1:0,21:21:57.19:802,57,0	0/0:16,0:16:48.16:0,48,670	1/1:1,17:18:12.08:650,12,0	1/1:3,21:23:66.02:865,66,0	1/1:2,9:11:27:363,27,0	0/0:30,0:30:90.25:0,90,1208	0/0:22,0:22:66.22:0,66,921	0/0:36,0:36:99:0,108,1474	1/1:0,20:20:60.09:810,60,0	1/1:0,18:18:41.61:625,42,0	1/1:1,14:15:18.03:232,18,0	1/1:0,17:17:44.04:621,44,0	1/1:1,17:18:39.07:709,39,0	1/1:0,19:19:57.19:790,57,0	1/1:0,12:12:36.12:505,36,0
chr10	30852217	.	A	AG	17660.81	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=13.350;DP=555;FS=8.654;HRun=0;HaplotypeScore=81.0558;InbreedingCoeff=0.9999;MQ=74.71;MQ0=0;MQRankSum=-3.112;QD=42.05;ReadPosRankSum=3.719;VQSLOD=5.2740;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,23:23:60.20:899,60,0	1/1:0,15:15:45.15:666,45,0	0/0:15,0:15:42.11:0,42,541	0/0:12,0:12:36.08:0,36,481	1/1:0,29:29:81.27:1215,81,0	1/1:0,19:19:51.17:765,51,0	1/1:0,21:21:60.20:900,60,0	1/1:0,17:17:51.17:766,51,0	0/0:24,0:24:69.23:0,69,964	1/1:0,24:25:75.20:1104,75,0	1/1:0,18:18:45.15:672,45,0	1/1:0,16:16:48.16:707,48,0	1/1:0,16:17:45.15:671,45,0	1/1:0,21:21:60.20:898,60,0	0/0:19,0:19:54.18:0,54,755	1/1:0,17:17:48.16:707,48,0	1/1:1,30:31:81.20:1215,81,0	1/1:0,29:28:84.28:1259,84,0	0/0:22,0:22:66.22:0,66,922	0/0:21,0:21:60.20:0,60,839	0/0:22,0:22:66.22:0,66,923	1/1:0,10:10:30.10:449,30,0	1/1:0,20:20:54.18:813,54,0	1/1:0,15:15:42.14:634,42,0	1/1:0,18:18:54.18:807,54,0	1/1:0,25:25:75.25:1117,75,0	1/1:0,19:19:48.16:721,48,0	1/1:0,15:15:45.15:676,45,0
chr10	30852576	.	G	GAATA	3992.33	PASS	AB=0.933;AC=7;AF=0.125;AN=56;BaseQRankSum=-7.468;DP=635;FS=0.509;HRun=0;HaplotypeScore=102.1783;InbreedingCoeff=0.8365;MQ=89.07;MQ0=0;MQRankSum=-2.538;QD=43.39;ReadPosRankSum=-1.806;VQSLOD=3.7422;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,120,2208	1/1:2,13:15:36.04:799,36,0	0/0:27,0:27:72.23:0,72,1259	0/0:25,0:25:59.95:0,60,1025	0/0:24,0:24:63.20:0,63,1143	0/0:24,0:24:45.15:0,45,840	0/0:30,0:30:84.29:0,84,1558	0/0:23,0:23:57.18:0,57,1006	0/0:15,0:15:42.14:0,42,775	1/1:3,19:25:72.21:1674,72,0	1/1:4,19:24:57.20:1464,57,0	0/0:25,0:25:60.21:0,60,1120	0/0:21,0:21:54.18:0,54,990	0/0:15,0:15:39.13:0,39,727	0/0:17,0:17:39.13:0,39,728	0/0:18,0:18:48.16:0,48,895	0/0:35,0:35:87.30:0,87,1611	0/0:30,0:30:87.30:0,87,1624	0/0:11,0:11:33.11:0,33,606	0/0:22,0:22:54.18:0,54,997	0/0:32,0:32:78.26:0,78,1456	0/0:13,0:13:39.12:0,39,698	0/0:18,0:18:42.14:0,42,773	0/0:15,0:15:36.12:0,36,672	0/0:18,0:18:45.14:0,45,809	0/1:26,2:28:55.24:55,0,1160	0/0:24,0:24:63.22:0,63,1174	0/0:19,0:19:57.20:0,57,1061
chr10	30853133	.	CAG	C	162.11	PASS	AB=0.971;AC=15;AF=0.288;AN=52;BaseQRankSum=2.781;DP=598;FS=9.047;HRun=0;HaplotypeScore=98.6921;InbreedingCoeff=-0.0827;MQ=62.97;MQ0=5;MQRankSum=-0.571;QD=0.56;ReadPosRankSum=-0.235;VQSLOD=1.2894;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:40,0:40:14.75:15,0,231	0/0:10,0:10:11.89:0,12,130	./.	./.	0/1:27,0:27:16.46:16,0,211	0/1:30,0:30:20.47:20,0,273	0/0:24,0:24:16.60:0,17,211	0/0:27,0:25:0:0,0,0	1/1:7,6:14:5.63:46,6,0	0/0:19,0:18:20.90:0,21,133	0/0:13,0:13:5.80:0,6,51	0/1:12,5:17:20.37:20,0,117	0/1:12,0:12:13.08:13,0,171	0/0:17,0:17:25.53:0,26,337	0/0:14,0:21:8.77:0,9,95	0/1:15,1:15:14.88:15,0,149	0/1:27,1:28:42.60:43,0,342	0/0:19,1:20:7.40:0,7,443	0/1:25,0:23:15.53:16,0,82	0/0:26,0:26:12.04:0,12,169	0/0:21,0:21:18.03:0,18,225	1/1:11,0:20:11.20:53,11,0	0/1:24,0:24:15.26:15,0,80	0/0:20,0:20:12.89:0,13,134	0/1:18,0:17:31.23:31,0,91	0/0:24,0:24:16.40:0,16,207	0/0:24,0:24:38.08:0,38,475	0/1:16,0:15:10.89:11,0,105
chr10	30853232	.	T	TTATC	4734.72	PASS	AB=0.955;AC=7;AF=0.125;AN=56;BaseQRankSum=-3.486;DP=649;FS=8.365;HRun=0;HaplotypeScore=106.3681;InbreedingCoeff=0.8370;MQ=73.98;MQ0=0;MQRankSum=-2.040;QD=54.42;ReadPosRankSum=0.116;VQSLOD=5.4979;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,105,2030	1/1:1,13:15:39.13:1066,39,0	0/0:24,0:21:19.89:0,20,831	0/0:19,0:18:48.11:0,48,881	0/0:23,0:23:66.20:0,66,1196	0/0:35,0:35:99:0,105,2003	0/0:28,0:28:78.20:0,78,1389	0/0:31,0:31:81.26:0,81,1508	0/0:17,0:17:48.15:0,48,895	1/1:3,23:32:90.25:2254,90,0	1/1:1,17:19:51.18:1395,51,0	0/0:17,0:17:51.17:0,51,957	0/0:13,0:13:39.11:0,39,691	0/0:18,0:18:48.16:0,48,898	0/0:17,0:17:48.10:0,48,817	0/0:24,0:24:66.20:0,66,1215	0/0:20,0:20:57.18:0,57,1068	0/0:21,0:21:35.29:0,35,1064	0/0:26,0:26:75.23:0,75,1386	0/0:41,0:41:99:0,120,2217	0/0:31,0:31:93.25:0,93,1682	0/0:23,0:23:66.21:0,66,1245	0/0:21,0:21:63.21:0,63,1172	0/0:21,0:21:57.15:0,57,1025	0/0:15,0:15:45.15:0,45,842	0/1:20,1:21:19:19,0,1038	0/0:22,0:22:63.19:0,63,1148	0/0:16,0:16:48.16:0,48,907
chr10	30854318	.	AT	A	5254.98	PASS	AB=0.791;AC=49;AF=0.875;AN=56;BaseQRankSum=1.170;DP=458;FS=3.364;HRun=12;HaplotypeScore=96.0108;InbreedingCoeff=0.4720;MQ=69.38;MQ0=2;MQRankSum=-0.679;QD=12.69;ReadPosRankSum=3.803;VQSLOD=5.0812;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:9,19:29:22.48:389,22,0	1/1:1,3:5:11:75,11,0	0/1:19,0:15:7.78:8,0,48	0/0:25,0:18:24.53:0,25,187	1/1:7,17:24:47.04:370,47,0	0/1:4,16:20:7.97:277,0,8	1/1:6,5:12:16.93:119,17,0	1/1:10,17:27:31.24:392,31,0	0/1:8,1:9:25.25:25,0,120	1/1:4,16:20:47.81:371,48,0	1/1:8,8:18:3.27:149,3,0	1/1:7,12:19:15.92:297,16,0	1/1:2,8:10:23.88:186,24,0	1/1:8,7:15:29.82:227,30,0	0/0:16,0:17:12.08:0,12,325	1/1:0,7:7:20.92:163,21,0	1/1:9,15:24:44.72:348,45,0	1/1:2,17:19:53.77:418,54,0	1/1:7,0:18:22.05:64,22,0	1/1:4,0:15:24.44:71,24,0	1/1:1,0:14:22.39:65,22,0	1/1:2,4:7:16.97:122,17,0	1/1:6,8:14:20.33:146,20,0	1/1:7,9:16:26.67:204,27,0	1/1:4,7:12:28.89:214,29,0	1/1:4,15:19:41.80:324,42,0	1/1:7,7:14:23.80:185,24,0	1/1:2,2:4:5.95:46,6,0
chr10	30854348	.	GTT	G	4048.01	PASS	AB=0.714;AC=36;AF=0.643;AN=56;BaseQRankSum=-2.614;DP=557;FS=2.079;HRun=15;HaplotypeScore=113.8645;InbreedingCoeff=0.3996;MQ=69.46;MQ0=12;MQRankSum=-2.694;QD=9.52;ReadPosRankSum=4.041;VQSLOD=2.3692;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:17,19:37:41.28:443,41,0	0/0:2,0:2:2.22:0,2,7	0/0:56,1:22:9.97:0,10,248	0/1:54,0:29:5.71:6,0,227	1/1:11,5:19:29.17:232,29,0	0/1:11,4:20:1.30:104,0,1	1/1:3,13:18:38.71:328,39,0	0/1:11,3:16:4.59:83,0,5	0/0:12,0:12:21.03:0,21,232	0/0:24,0:29:59.92:0,60,526	0/0:11,0:16:42.07:0,42,438	0/1:10,11:22:22.79:259,0,23	0/1:4,4:9:21.60:91,0,22	1/1:10,11:22:29.36:249,29,0	0/0:12,1:16:4.11:0,4,374	1/1:3,10:13:17.88:158,18,0	1/1:7,12:20:15.18:280,15,0	1/1:12,11:23:23.50:196,23,0	0/1:9,0:18:4.59:86,0,5	1/1:5,3:15:27.87:148,28,0	1/1:6,0:17:23.31:104,23,0	1/1:4,5:10:13.98:149,14,0	1/1:3,9:14:24.39:241,24,0	1/1:6,11:18:3.43:209,3,0	1/1:4,11:15:26.74:237,27,0	0/1:7,7:16:1.60:180,0,2	1/1:7,5:16:29.72:225,30,0	0/1:4,3:7:6.26:42,0,6
chr10	30854489	.	TC	T	14973.99	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=0.199;DP=490;FS=12.889;HRun=2;HaplotypeScore=53.5475;InbreedingCoeff=0.9966;MQ=87.13;MQ0=0;MQRankSum=-6.152;QD=36.00;ReadPosRankSum=2.405;VQSLOD=4.3026;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,20:20:51.17:662,51,0	1/1:0,11:11:30.10:390,30,0	0/0:16,0:16:48.04:0,48,630	0/0:18,0:18:48.11:0,48,650	1/1:0,8:8:21.07:272,21,0	1/1:1,13:14:39.13:506,39,0	1/1:0,24:24:69.22:896,69,0	1/1:1,17:18:51.15:647,51,0	0/0:19,0:19:57.19:0,57,854	1/1:0,18:18:54.18:701,54,0	1/1:1,10:11:27.09:351,27,0	1/1:0,34:34:96.31:1246,96,0	1/1:0,16:16:45.15:584,45,0	1/1:1,16:17:48.16:619,48,0	0/0:21,0:21:63.20:0,63,923	1/1:0,15:15:42.14:545,42,0	1/1:0,30:30:81.22:1032,81,0	1/1:0,28:28:78.25:1013,78,0	1/1:1,15:16:45.11:566,45,0	1/1:0,11:11:33.11:428,33,0	1/1:0,28:28:84.23:1071,84,0	1/1:0,14:14:36.07:448,36,0	1/1:1,13:14:39.13:506,39,0	1/1:0,23:23:63.20:818,63,0	1/1:1,9:10:24.08:312,24,0	1/1:0,13:13:39.13:507,39,0	1/1:1,15:16:45.15:583,45,0	1/1:0,7:7:21.07:272,21,0
chr10	30854949	.	ACCCCCC	A	1323.42	PASS	AC=6;AF=0.111;AN=54;BaseQRankSum=1.958;DP=212;FS=1.922;HRun=12;HaplotypeScore=48.6799;InbreedingCoeff=0.5947;MQ=75.49;MQ0=0;MQRankSum=-5.320;QD=30.78;ReadPosRankSum=3.626;VQSLOD=1.0067;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:14.98:0,15,131	0/0:2,0:2:3.01:0,3,87	0/0:7,0:7:9.02:0,9,178	0/0:11,0:9:18.58:0,19,271	0/0:8,0:8:18.04:0,18,333	0/0:4,0:5:14.06:0,14,238	0/0:7,0:9:18.06:0,18,396	0/0:12,0:12:8.99:0,9,180	0/0:8,0:8:15.05:0,15,448	./.	0/0:1,0:1:3.01:0,3,89	0/0:7,0:7:12.04:0,12,364	0/0:6,0:6:6.02:0,6,185	0/0:4,0:4:6.01:0,6,75	0/0:5,0:5:12.04:0,12,381	0/0:7,0:7:15.04:0,15,341	0/0:9,0:9:15.04:0,15,311	0/0:12,0:13:30.03:0,30,753	1/1:4,12:16:36.04:680,36,0	1/1:0,11:11:26.81:417,27,0	1/1:2,14:16:18.06:362,18,0	0/0:3,0:3:3.01:0,3,49	0/0:3,0:3:2.99:0,3,24	0/0:5,0:5:12.02:0,12,189	0/0:6,0:6:3.90:0,4,50	0/0:8,0:8:11.99:0,12,305	0/0:3,0:3:3.01:0,3,90	0/0:13,0:13:24.01:0,24,391
chr10	30855518	.	CTCTG	C	444.82	PASS	AB=0.819;AC=4;AF=0.071;AN=56;BaseQRankSum=3.260;DP=735;FS=3.285;HRun=0;HaplotypeScore=170.9715;InbreedingCoeff=0.5738;MQ=59.37;MQ0=15;MQRankSum=-3.351;QD=7.94;ReadPosRankSum=-3.005;VQSLOD=2.6948;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:33.09:0,33,800	0/0:11,0:11:21.07:0,21,544	0/0:33,0:17:30.57:0,31,732	0/0:70,0:38:61.87:0,62,1377	0/0:28,0:28:36.11:0,36,875	0/0:27,0:27:19.49:0,19,791	0/0:31,0:31:32.09:0,32,856	0/0:49,0:49:99:0,120,2439	0/0:19,0:19:42.06:0,42,1081	0/0:19,0:19:54.18:0,54,1286	0/0:16,0:16:21.52:0,22,975	0/0:28,0:28:42.13:0,42,891	0/0:17,0:16:20.77:0,21,458	0/0:27,0:26:42.05:0,42,1030	0/0:22,0:21:51.18:0,51,1307	0/0:26,0:22:39.60:0,40,957	0/0:22,0:22:51.60:0,52,1136	0/0:16,0:16:44.52:0,45,1006	0/1:21,5:24:99:250,0,120	1/1:13,5:18:13.39:260,13,0	0/1:9,3:10:2.36:46,0,2	0/0:32,0:31:39.11:0,39,914	0/0:19,0:19:33.11:0,33,816	0/0:32,0:31:46.65:0,47,1172	0/0:22,0:22:45.11:0,45,1112	0/0:33,0:33:63.01:0,63,1764	0/0:23,0:23:38.96:0,39,766	0/0:20,0:18:42.31:0,42,672
chr10	30855533	.	CCTCT	C	378.88	PASS	AB=0.943;AC=14;AF=0.280;AN=50;BaseQRankSum=-1.579;DP=728;FS=3.612;HRun=0;HaplotypeScore=173.4150;InbreedingCoeff=0.0823;MQ=46.61;MQ0=22;MQRankSum=0.706;QD=1.50;ReadPosRankSum=-0.264;VQSLOD=2.6408;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,1:38:6.02:0,6,93	0/0:12,0:12:2.97:0,3,20	./.	./.	0/0:28,0:28:6.02:0,6,72	0/0:25,1:26:11.91:0,12,89	1/1:30,1:31:4.63:68,5,0	0/0:56,0:56:10.75:0,11,81	./.	0/0:19,0:18:12:0,12,123	0/0:17,0:17:6.97:0,7,37	0/1:25,1:28:44.78:63,0,45	0/0:14,0:13:1.55:0,2,4	0/1:24,2:25:30.67:39,0,31	0/0:23,0:22:5.99:0,6,50	1/1:26,1:23:7.29:113,7,0	0/1:23,0:23:28.74:29,0,47	0/1:16,1:16:21.65:84,0,22	0/0:28,0:26:6.01:0,6,62	0/0:31,0:30:3.60:0,4,17	1/1:13,0:11:1.32:4,1,0	0/0:26,2:27:3.01:0,3,36	0/0:21,1:21:5.99:0,6,82	1/1:32,0:31:3.96:46,4,0	0/0:22,0:22:5.84:0,6,52	0/1:32,0:32:32.74:33,0,61	0/1:19,0:21:39.03:39,0,73	0/0:18,0:16:14.50:0,15,101
chr10	30855541	.	T	TGC	394.32	PASS	AB=0.986;AC=7;AF=0.125;AN=56;BaseQRankSum=6.949;DP=735;FS=1.657;HRun=0;HaplotypeScore=162.9069;InbreedingCoeff=0.4151;MQ=43.18;MQ0=24;MQRankSum=-7.051;QD=3.26;ReadPosRankSum=-0.983;VQSLOD=2.9066;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:40:35.79:0,36,500	0/0:13,0:13:24.34:0,24,328	0/0:16,0:4:8.99:0,9,132	0/0:34,0:9:17.61:0,18,213	0/0:30,0:30:30.08:0,30,441	0/0:29,0:29:26.50:0,26,351	0/0:34,0:34:46.72:0,47,595	0/0:54,0:54:99:0,150,1960	0/0:23,0:21:30.98:0,31,504	0/0:20,0:19:57.13:0,57,778	0/0:18,0:18:45.15:0,45,677	0/0:35,0:35:42.11:0,42,534	0/0:16,0:15:32.37:0,32,364	0/0:26,0:25:47.79:0,48,661	0/0:23,0:22:48.12:0,48,715	0/1:28,0:23:10.42:10,0,420	0/0:23,0:23:47:0,47,610	0/0:17,0:16:40.28:0,40,477	0/1:22,1:21:99:185,0,300	1/1:28,5:32:22.84:238,23,0	1/1:13,1:12:4.41:52,4,0	0/0:32,0:31:32.97:0,33,462	0/0:26,0:25:36.10:0,36,509	0/0:32,0:31:47.42:0,47,635	0/0:21,0:21:33.11:0,33,507	0/0:33,0:32:53.23:0,53,1123	0/1:23,0:23:39.98:40,0,255	0/0:18,0:16:3.96:0,4,313
chr10	30855561	.	T	TGC	1677.96	PASS	AB=0.893;AC=21;AF=0.375;AN=56;BaseQRankSum=8.140;DP=601;FS=42.975;HRun=0;HaplotypeScore=130.9877;InbreedingCoeff=-0.4152;MQ=42.69;MQ0=23;MQRankSum=-3.879;QD=3.75;ReadPosRankSum=-1.428;VQSLOD=0.6706;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:22,13:36:15.08:15,0,223	0/0:9,0:9:15.05:0,15,207	0/1:10,0:5:2.97:3,0,69	0/1:23,0:5:13.76:14,0,15	0/1:20,10:30:49.85:50,0,270	0/1:18,9:26:99:112,0,336	0/0:18,11:30:31.42:0,31,450	0/1:32,0:31:99:250,0,717	0/0:23,0:21:30.95:0,31,490	0/0:16,0:14:38.09:0,38,435	0/0:11,0:11:24.08:0,24,357	0/1:24,8:32:79.36:79,0,426	0/1:12,2:13:42.91:43,0,216	0/1:16,1:16:99:124,0,130	0/0:16,0:15:24.03:0,24,323	0/0:23,5:24:7.26:0,7,491	0/1:19,0:19:99:135,0,251	0/1:12,1:12:99:206,0,124	0/0:19,0:16:23.77:0,24,386	1/1:32,0:32:14.40:152,14,0	0/1:14,0:12:12.25:42,0,12	0/1:15,9:25:55.62:56,0,283	0/1:23,0:23:99:115,0,357	0/1:30,0:29:56.05:56,0,412	0/1:13,1:14:68.82:242,0,69	0/1:22,0:21:2.58:3,0,600	0/1:9,11:20:62.82:63,0,245	0/1:12,1:12:81.19:81,0,119
chr10	30855582	.	CTCCA	C	193.69	PASS	AB=0.982;AC=15;AF=0.268;AN=56;BaseQRankSum=6.357;DP=527;FS=32.060;HRun=0;HaplotypeScore=122.8011;InbreedingCoeff=0.1519;MQ=62.90;MQ0=13;MQRankSum=-7.662;QD=0.94;ReadPosRankSum=-2.834;VQSLOD=-0.5396;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:31:36.28:0,36,635	0/0:9,0:9:17.93:0,18,238	0/0:21,0:20:31.89:0,32,791	0/0:31,0:19:26.67:0,27,595	0/0:20,0:20:33:0,33,514	0/0:27,0:26:26.62:0,27,576	0/0:27,0:27:37.24:0,37,753	0/0:23,0:22:46.98:0,47,892	0/0:14,0:12:23.98:0,24,350	0/1:13,0:11:0.25:0,0,314	0/0:10,0:10:27.09:0,27,490	0/1:32,0:32:29.11:29,0,682	0/1:15,1:15:16.36:16,0,372	0/1:15,2:16:44.62:45,0,164	0/0:13,0:12:28.33:0,28,476	0/1:23,0:20:1.83:2,0,485	0/1:18,0:18:9.73:10,0,401	0/1:13,0:12:22.96:23,0,247	1/1:8,0:5:7.12:55,7,0	1/1:29,0:29:4.48:53,4,0	1/1:8,0:8:6.02:85,6,0	0/0:20,0:19:24.08:0,24,375	0/0:22,0:22:48.16:0,48,844	0/0:28,3:30:53.93:0,54,773	0/0:7,0:7:12.02:0,12,154	0/0:14,0:14:38.23:0,38,607	0/1:20,0:20:13.14:13,0,461	0/1:9,0:9:16.10:16,0,99
chr10	30855584	.	CCA	C	138.88	PASS	AB=0.962;AC=12;AF=0.214;AN=56;BaseQRankSum=7.254;DP=478;FS=31.106;HRun=0;HaplotypeScore=94.7676;InbreedingCoeff=0.2636;MQ=66.92;MQ0=11;MQRankSum=-6.174;QD=0.96;ReadPosRankSum=-2.881;VQSLOD=-0.4580;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,2:24:38.14:0,38,584	0/0:9,0:9:17.98:0,18,262	0/0:22,0:21:34.90:0,35,839	0/0:32,0:20:33.70:0,34,640	0/0:15,1:16:36.04:0,36,557	0/1:23,0:22:5.66:6,0,545	0/0:21,2:23:55.45:0,55,828	0/0:21,0:20:59.91:0,60,967	0/0:13,0:12:23.89:0,24,329	0/1:11,1:11:41.08:41,0,310	0/0:9,1:10:27.09:0,27,452	0/1:27,1:28:12.35:12,0,694	0/0:12,0:12:12.06:0,12,387	0/1:13,2:15:10.26:10,0,225	0/0:11,0:11:28.34:0,28,453	0/0:18,0:18:27.56:0,28,557	0/0:16,0:16:24.70:0,25,434	0/0:11,0:10:22.02:0,22,307	1/1:6,1:5:5.51:54,6,0	1/1:6,17:23:2.83:37,3,0	1/1:6,1:7:6.02:85,6,0	0/0:16,3:18:23.95:0,24,375	0/0:21,1:22:48.16:0,48,791	0/0:30,0:30:54.65:0,55,819	0/0:8,1:9:21.05:0,21,297	0/0:14,0:14:41.76:0,42,628	0/1:20,0:20:21.34:21,0,461	0/1:9,0:9:20.13:20,0,135
chr10	30855753	.	ACCAGCCACGCACC	A	1779.27	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=6.980;DP=551;FS=8.417;HRun=0;HaplotypeScore=199.5614;InbreedingCoeff=0.9411;MQ=93.46;MQ0=0;MQRankSum=-6.123;QD=48.09;ReadPosRankSum=0.745;VQSLOD=2.3482;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,99,5580	0/0:10,0:10:27.07:0,27,1411	0/0:23,0:23:36.12:0,36,1781	0/0:28,0:28:46.63:0,47,2163	0/0:24,0:24:63.22:0,63,3663	0/0:30,0:30:60.20:0,60,3501	0/0:15,0:15:30.10:0,30,1766	0/0:35,0:35:81.27:0,81,4485	0/0:15,0:15:15.05:0,15,960	0/0:16,0:16:36.12:0,36,2225	0/0:16,0:16:42.14:0,42,2516	0/0:26,0:26:66.23:0,66,4058	0/0:14,0:14:30.10:0,30,1854	0/0:19,0:19:48.16:0,48,2921	0/0:11,0:11:24.08:0,24,1447	0/0:15,0:15:33.10:0,33,1830	0/0:22,0:22:63.22:0,63,3955	0/0:22,0:21:66.23:0,66,4002	1/1:9,7:16:21.07:798,21,0	1/1:6,7:13:24.08:912,24,0	1/1:4,4:8:6.02:203,6,0	0/0:20,0:20:48.14:0,48,2491	0/0:13,0:13:36.12:0,36,2109	0/0:35,0:34:99:0,99,5850	0/0:23,0:23:54.19:0,54,3457	0/0:17,0:17:48.16:0,48,2755	0/0:15,0:15:39.13:0,39,2319	0/0:8,0:8:12.04:0,12,519
chr10	30856198	.	A	AC	4551.36	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=16.471;DP=450;FS=1.613;HRun=0;HaplotypeScore=191.4296;InbreedingCoeff=0.9868;MQ=92.56;MQ0=0;MQRankSum=-15.508;QD=21.47;ReadPosRankSum=5.425;VQSLOD=4.8125;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,20:21:48.92:425,49,0	0/0:12,0:12:36.12:0,36,503	0/0:34,0:34:95.01:0,95,1238	0/0:24,0:24:69.08:0,69,886	1/1:3,18:21:20.45:153,20,0	1/1:0,12:13:38.98:351,39,0	1/1:1,7:8:19.74:147,20,0	1/1:0,9:9:24.05:241,24,0	0/0:33,0:33:99:0,99,1362	0/0:16,0:16:48.16:0,48,671	0/0:16,0:16:45.14:0,45,612	1/1:0,13:13:39.04:359,39,0	1/1:4,11:15:41.93:368,42,0	1/1:0,10:10:30.03:278,30,0	0/0:29,0:29:84.28:0,84,1173	1/1:0,16:17:50.93:460,51,0	1/1:1,9:10:24.91:223,25,0	1/1:0,7:7:19.66:161,20,0	0/0:25,0:25:72.19:0,72,965	0/0:21,0:21:60.20:0,60,838	0/0:28,0:28:81.21:0,81,1092	1/1:1,11:12:19.85:179,20,0	1/1:0,12:12:17.19:186,17,0	1/1:2,6:9:19.89:155,20,0	1/1:1,10:11:25.83:227,26,0	1/1:2,12:14:39.04:379,39,0	1/1:1,5:6:15.02:143,15,0	1/1:0,4:4:12.02:117,12,0
chr10	30856199	.	A	ATATCACATT	33157.12	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=16.348;DP=558;FS=1.017;HRun=0;HaplotypeScore=231.1053;InbreedingCoeff=0.9985;MQ=83.56;MQ0=0;MQRankSum=-17.727;QD=103.94;ReadPosRankSum=0.492;VQSLOD=4.6576;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,20:27:75.21:2710,75,0	0/0:12,0:12:36.12:0,36,1075	0/0:33,0:33:96.32:0,96,2648	0/0:24,0:24:63.56:0,64,1953	1/1:11,18:29:78.21:2493,78,0	1/1:9,12:21:63.17:2382,63,0	1/1:12,7:19:54.08:1657,54,0	1/1:8,9:17:45.15:1823,45,0	0/0:33,0:33:96.33:0,96,3049	0/0:17,0:17:48.16:0,48,1565	0/0:16,0:16:42.14:0,42,1282	1/1:8,13:21:60.16:2441,60,0	1/1:6,10:17:48.62:1881,49,0	1/1:4,10:14:42.10:1684,42,0	0/0:31,0:31:87.27:0,87,2673	1/1:7,16:23:69.24:2873,69,0	1/1:12,9:21:54.14:2143,54,0	1/1:3,7:10:30.07:1098,30,0	0/0:24,0:24:69.24:0,69,1993	0/0:21,0:21:60.21:0,60,1917	0/0:28,0:28:81.28:0,81,2456	1/1:6,11:17:51.13:1822,51,0	1/1:2,11:14:33.11:1280,33,0	1/1:8,6:14:30.10:1194,30,0	1/1:7,10:17:45.05:1543,45,0	1/1:9,12:21:60.15:2255,60,0	1/1:6,5:11:30.06:1207,30,0	1/1:2,4:6:18.03:671,18,0
chr10	30856269	.	GAGCTCT	G	1785.11	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=4.173;DP=592;FS=4.622;HRun=0;HaplotypeScore=150.3875;InbreedingCoeff=0.9946;MQ=82.77;MQ0=1;MQRankSum=-5.790;QD=37.19;ReadPosRankSum=-0.461;VQSLOD=3.4568;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:81.28:0,81,2836	0/0:9,0:9:27.09:0,27,897	0/0:30,0:30:72.58:0,73,2694	0/0:28,0:27:64:0,64,1893	0/0:21,0:21:51.18:0,51,1791	0/0:18,0:18:48.16:0,48,1625	0/0:22,0:22:54.19:0,54,1846	0/0:27,0:27:81.27:0,81,2658	0/0:34,0:34:99:0,99,3317	0/0:17,0:17:51.18:0,51,1817	0/0:20,0:20:60.21:0,60,2021	0/0:20,0:20:57.20:0,57,2032	0/0:18,0:18:48.16:0,48,1658	0/0:20,0:20:60.21:0,60,2136	0/0:28,0:28:81.28:0,81,2888	0/0:21,0:21:54.19:0,54,1897	0/0:22,0:21:57.20:0,57,2032	0/0:18,0:18:54.19:0,54,1882	1/1:2,14:16:42.10:849,42,0	1/1:3,13:16:27.09:649,27,0	1/1:4,12:16:16.05:428,16,0	0/0:22,0:22:57.20:0,57,2031	0/0:14,0:14:42.14:0,42,1430	0/0:19,0:19:42.14:0,42,1507	0/0:18,0:18:42.14:0,42,1509	0/0:31,0:31:90.31:0,90,3206	0/0:23,0:23:63.22:0,63,2187	0/0:12,0:12:36.12:0,36,1283
chr10	30857165	.	GGT	G	307.19	PASS	AB=0.899;AC=14;AF=0.250;AN=56;BaseQRankSum=3.709;DP=627;FS=2.393;HRun=0;HaplotypeScore=89.1949;InbreedingCoeff=-0.3394;MQ=65.57;MQ0=10;MQRankSum=-0.372;QD=0.86;ReadPosRankSum=0.645;VQSLOD=1.0125;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:42,2:44:17.49:17,0,716	0/0:5,0:13:21.01:0,21,202	0/0:39,0:28:1.82:0,2,5	0/0:28,0:17:6.02:0,6,89	0/1:19,1:22:37.72:38,0,326	0/1:14,3:16:36.45:36,0,320	0/1:29,2:33:23.53:24,0,634	0/1:21,0:21:20.74:21,0,95	0/1:22,2:23:0.20:0,0,378	0/0:17,0:22:21.03:0,21,231	0/0:9,0:18:18.01:0,18,176	0/1:15,3:18:45.47:45,0,204	0/1:19,2:21:21.24:21,0,124	0/0:11,0:11:21.06:0,21,283	0/0:13,0:14:18.04:0,18,236	0/1:7,5:12:54.50:55,0,79	0/1:27,4:31:54.77:55,0,422	0/1:26,2:28:30.45:30,0,387	0/0:12,0:12:14.98:0,15,163	0/0:12,0:12:12.03:0,12,143	0/0:32,0:35:23.99:0,24,220	0/1:18,0:18:8.44:8,0,153	0/0:15,1:16:2.85:0,3,457	0/1:35,2:36:45.53:46,0,603	0/0:15,0:19:12.01:0,12,121	0/1:25,5:30:56.97:57,0,156	0/0:20,0:20:12.98:0,13,348	0/0:4,0:9:3.87:0,4,135
chr10	30857245	.	TG	T	1623.02	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=7.686;DP=526;FS=1.626;HRun=8;HaplotypeScore=55.1859;InbreedingCoeff=0.9545;MQ=88.75;MQ0=1;MQRankSum=-1.812;QD=23.87;ReadPosRankSum=1.460;VQSLOD=4.3619;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,129,1486	0/0:4,0:4:5:0,5,103	0/0:19,0:19:31.99:0,32,493	0/0:21,0:21:44.88:0,45,465	0/0:24,0:24:63.19:0,63,760	0/0:15,0:15:33.10:0,33,399	0/0:13,0:13:36.10:0,36,423	0/0:31,0:31:75.22:0,75,895	0/0:15,0:15:36.11:0,36,434	0/0:13,0:13:33.10:0,33,395	0/0:14,0:14:36.11:0,36,435	0/0:15,0:15:42.11:0,42,486	0/0:13,0:13:39.08:0,39,445	0/0:10,0:10:27.07:0,27,315	0/0:19,0:19:54.17:0,54,652	0/0:17,0:17:21.58:0,22,458	0/0:28,0:28:78.19:0,78,912	0/0:18,0:17:39.11:0,39,459	1/1:2,14:16:45.07:433,45,0	1/1:0,21:21:63.10:608,63,0	1/1:3,28:31:75.12:724,75,0	0/0:18,0:18:45.13:0,45,531	0/0:13,0:13:33.09:0,33,388	0/0:24,0:24:63.19:0,63,760	0/0:14,0:14:42.13:0,42,507	0/0:27,0:27:66.19:0,66,783	0/0:14,0:14:39.06:0,39,442	0/0:14,0:14:39.12:0,39,470
chr10	30858912	.	G	GA	10352.23	PASS	AB=0.786;AC=48;AF=0.857;AN=56;BaseQRankSum=1.676;DP=526;FS=1.781;HRun=10;HaplotypeScore=74.2893;InbreedingCoeff=0.7524;MQ=75.29;MQ0=0;MQRankSum=-0.687;QD=21.89;ReadPosRankSum=-0.849;VQSLOD=5.4072;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,14:20:38.93:398,39,0	1/1:0,10:10:30.08:320,30,0	0/1:15,0:15:19.09:19,0,87	0/0:9,0:9:14.87:0,15,110	1/1:7,19:26:26.87:463,27,0	1/1:2,20:22:35.51:583,36,0	1/1:6,12:18:12.33:329,12,0	1/1:6,20:26:60.13:624,60,0	0/0:24,0:24:59.91:0,60,493	1/1:6,10:17:35.79:344,36,0	1/1:1,17:18:39.02:391,39,0	1/1:3,14:19:41.81:413,42,0	1/1:4,18:22:48.12:511,48,0	0/1:3,9:12:0.57:200,0,1	0/0:20,0:20:50.92:0,51,419	1/1:1,11:12:27.07:288,27,0	1/1:2,17:19:42.11:448,42,0	1/1:3,11:15:38.96:397,39,0	1/1:5,14:21:35.06:382,35,0	1/1:6,19:26:53.90:534,54,0	1/1:0,8:8:21.05:224,21,0	1/1:3,15:19:37.20:469,37,0	1/1:1,17:20:45.25:446,45,0	1/1:1,10:11:27.07:288,27,0	1/1:3,27:31:47.36:686,47,0	1/1:4,14:19:44.88:439,45,0	1/1:7,24:32:47.37:693,47,0	1/1:0,14:15:44.95:462,45,0
chr10	30859416	.	GAATA	G	686.17	PASS	AB=0.981;AC=19;AF=0.559;AN=34;BaseQRankSum=-2.730;DP=242;FS=0.000;HRun=0;HaplotypeScore=42.5721;InbreedingCoeff=0.1058;MQ=67.88;MQ0=0;MQRankSum=0.263;QD=5.67;ReadPosRankSum=4.534;VQSLOD=0.8885;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:21.07:0,21,400	0/0:6,0:6:6.02:0,6,140	./.	./.	./.	0/1:12,0:12:5.40:123,0,5	./.	0/0:29,0:28:0:0,0,0	1/1:8,0:9:9.02:117,9,0	1/1:9,2:11:6.02:92,6,0	1/1:14,0:14:3:25,3,0	./.	0/0:3,0:3:3:0,3,29	0/1:6,0:6:17.38:39,0,17	./.	./.	0/1:17,1:19:26.39:126,0,26	0/0:11,0:11:11.95:0,12,93	1/1:13,0:13:3:28,3,0	./.	./.	./.	1/1:9,0:9:6.01:69,6,0	./.	1/1:6,2:8:3.01:45,3,0	1/1:6,0:6:3:28,3,0	0/1:10,0:10:20.36:38,0,20	0/1:4,0:4:14.37:77,0,14
chr10	30859455	.	TAAATAAATAAATAAGC	T	819.05	PASS	AB=1.000;AC=7;AF=0.130;AN=54;BaseQRankSum=3.532;DP=217;FS=2.041;HRun=0;HaplotypeScore=108.3767;InbreedingCoeff=0.6479;MQ=55.36;MQ0=3;MQRankSum=0.461;QD=30.34;ReadPosRankSum=0.794;VQSLOD=2.7472;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:27.09:0,27,1583	0/0:2,0:2:6.02:0,6,476	0/0:7,0:4:11.97:0,12,131	0/0:6,0:1:2.92:0,3,17	0/0:3,0:3:9.03:0,9,197	0/0:13,0:13:39.13:0,39,1268	0/0:6,0:6:18.06:0,18,356	0/0:40,0:35:72.04:0,72,1204	0/0:7,0:7:21.07:0,21,519	0/0:5,0:5:15.05:0,15,520	0/0:7,0:7:18.05:0,18,300	./.	0/0:2,0:2:6.02:0,6,243	0/0:7,0:7:21.07:0,21,539	0/1:3,0:3:15.97:16,0,91	0/0:5,0:5:15.05:0,15,463	0/0:12,0:12:36.09:0,36,1109	0/0:11,0:11:27.07:0,27,959	1/1:7,8:15:32.94:517,33,0	1/1:6,0:6:18.06:284,18,0	1/1:3,0:3:9.03:141,9,0	0/0:6,0:6:17.99:0,18,267	0/0:7,0:6:18.06:0,18,421	0/0:2,0:2:6.02:0,6,100	0/0:5,0:5:12.04:0,12,278	0/0:5,0:5:15.05:0,15,366	0/0:6,0:6:18.06:0,18,443	0/0:10,0:10:27.09:0,27,625
chr10	30859467	.	T	TAAGC	6064.09	PASS	AB=1.000;AC=34;AF=0.607;AN=56;BaseQRankSum=-3.505;DP=283;FS=0.675;HRun=0;HaplotypeScore=55.7756;InbreedingCoeff=0.6682;MQ=55.53;MQ0=4;MQRankSum=1.730;QD=28.47;ReadPosRankSum=-0.105;VQSLOD=3.9028;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,14:19:15.05:367,15,0	0/0:3,0:3:9.03:0,9,144	0/0:12,0:6:14.29:0,14,183	0/1:12,0:4:3.02:3,0,41	0/1:8,0:8:23.02:298,0,23	1/1:13,0:13:27.82:361,28,0	0/1:6,0:6:5.93:238,0,6	1/1:42,0:38:57.09:913,57,0	0/0:8,0:8:15.05:0,15,229	0/0:8,0:8:24.08:0,24,360	0/0:6,0:6:18.06:0,18,285	1/1:2,0:2:6.02:100,6,0	1/1:3,0:3:4.88:98,5,0	1/1:12,0:12:28.65:448,29,0	0/0:4,0:4:12.04:0,12,190	0/1:6,0:6:29.71:233,0,30	1/1:14,0:14:11.18:305,11,0	1/1:13,0:13:29.01:393,29,0	0/0:19,0:19:36.07:0,36,387	0/0:7,0:7:21.05:0,21,219	0/0:3,0:3:9.02:0,9,92	1/1:11,0:11:33.08:488,33,0	1/1:11,0:10:25.90:385,26,0	1/1:5,0:5:15.05:248,15,0	1/1:8,0:8:20.24:256,20,0	1/1:6,0:6:17.55:267,18,0	1/1:8,0:8:18.93:255,19,0	1/1:14,0:14:28.63:411,29,0
chr10	30859481	.	AGC	A	226.19	PASS	AB=0.879;AC=3;AF=0.054;AN=56;BaseQRankSum=7.307;DP=347;FS=0.936;HRun=0;HaplotypeScore=71.2120;InbreedingCoeff=-0.0038;MQ=68.94;MQ0=3;MQRankSum=-2.033;QD=5.95;ReadPosRankSum=4.565;VQSLOD=2.5271;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:24.08:0,24,330	0/0:3,0:3:9.03:0,9,183	0/0:19,0:13:39.13:0,39,721	0/0:17,0:9:27.09:0,27,453	0/0:13,0:13:39.13:0,39,712	0/0:14,0:14:42.14:0,42,805	0/0:9,0:9:27.09:0,27,501	0/0:38,0:35:99:0,102,1765	0/0:10,0:10:30.10:0,30,554	0/0:10,0:10:30.10:0,30,579	0/0:9,0:9:27.09:0,27,532	0/0:3,0:3:9.03:0,9,162	0/0:4,0:4:12.04:0,12,223	0/0:15,0:15:45.15:0,45,814	0/0:8,0:8:24.08:0,24,453	0/0:7,0:7:21.07:0,21,399	0/0:14,0:14:42.14:0,42,786	0/0:15,0:15:42.14:0,42,807	0/1:11,7:18:9.64:152,0,10	0/1:10,1:11:62.33:123,0,62	0/1:9,0:9:51.35:51,0,91	0/0:13,0:13:39.13:0,39,741	0/0:13,0:12:36.12:0,36,699	0/0:7,0:7:21.07:0,21,383	0/0:12,0:12:33.11:0,33,601	0/0:8,0:8:24.08:0,24,435	0/0:10,0:10:30.10:0,30,569	0/0:19,0:19:51.17:0,51,938
chr10	30859484	.	AAG	A	213.60	PASS	AB=0.889;AC=3;AF=0.054;AN=56;BaseQRankSum=7.362;DP=366;FS=0.930;HRun=0;HaplotypeScore=74.2165;InbreedingCoeff=-0.0618;MQ=72.32;MQ0=3;MQRankSum=-0.297;QD=4.75;ReadPosRankSum=4.641;VQSLOD=1.8597;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:27.09:0,27,370	0/0:3,0:3:9.03:0,9,183	0/0:22,0:16:48.15:0,48,792	0/0:17,0:9:27.09:0,27,460	0/0:13,0:13:39.13:0,39,712	0/0:15,0:15:45.15:0,45,839	0/0:9,0:9:27.09:0,27,501	0/0:39,0:36:99:0,108,1795	0/0:10,0:10:30.10:0,30,534	0/0:10,0:10:30.10:0,30,579	0/0:9,0:9:27.09:0,27,532	0/0:4,0:4:12.04:0,12,204	0/0:4,0:4:12.04:0,12,223	0/0:14,0:14:42.14:0,42,785	0/0:9,0:9:27.09:0,27,497	0/0:7,0:7:21.07:0,21,399	0/0:14,0:14:42.14:0,42,758	0/0:15,0:15:42.14:0,42,807	0/1:14,7:21:40.85:146,0,41	0/1:10,1:11:60.37:123,0,60	0/1:13,0:13:44.47:44,0,129	0/0:14,0:14:42.14:0,42,783	0/0:15,0:14:42.14:0,42,787	0/0:7,0:7:21.07:0,21,383	0/0:13,0:13:36.12:0,36,644	0/0:8,0:8:24.08:0,24,435	0/0:11,0:11:33.11:0,33,613	0/0:19,0:19:54.18:0,54,982
chr10	30860121	.	AAC	A	8918.27	PASS	AB=0.966;AC=33;AF=0.589;AN=56;BaseQRankSum=-0.165;DP=665;FS=0.361;HRun=0;HaplotypeScore=139.2204;InbreedingCoeff=0.8273;MQ=46.74;MQ0=38;MQRankSum=4.927;QD=22.02;ReadPosRankSum=0.518;VQSLOD=5.0499;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:33,1:34:59.34:578,59,0	0/0:7,0:7:20.97:0,21,247	0/0:31,0:6:14.92:0,15,173	0/0:45,0:11:24.02:0,24,309	1/1:33,1:34:64.31:627,64,0	1/1:25,1:25:68.89:704,69,0	1/1:19,0:18:48.24:520,48,0	1/1:37,4:33:64.89:815,65,0	0/0:22,0:21:57.09:0,57,908	0/0:31,0:28:69.58:0,70,835	0/0:23,0:22:50.61:0,51,461	0/1:20,1:20:9:353,0,9	1/1:14,0:14:38.95:357,39,0	1/1:17,0:15:28.44:290,28,0	0/0:22,0:21:60.20:0,60,1000	1/1:13,1:14:33:327,33,0	1/1:27,1:27:73.74:756,74,0	0/1:16,1:16:0.72:318,0,1	0/0:18,0:9:17.44:0,17,184	0/0:25,0:24:59.68:0,60,648	0/0:36,0:28:44.14:0,44,531	1/1:18,1:19:44.28:442,44,0	1/1:17,3:20:50.70:493,51,0	1/1:24,1:24:47.89:494,48,0	1/1:12,0:12:27.06:303,27,0	1/1:21,0:18:45.11:528,45,0	1/1:35,1:36:79.72:926,80,0	0/1:6,0:7:6.56:85,0,7
chr10	30860127	.	CACCA	C	15524.94	PASS	AB=0.733;AC=35;AF=0.625;AN=56;BaseQRankSum=-2.588;DP=669;FS=1.153;HRun=0;HaplotypeScore=139.2808;InbreedingCoeff=0.8888;MQ=45.75;MQ0=44;MQRankSum=3.284;QD=38.24;ReadPosRankSum=0.157;VQSLOD=5.0049;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:21,9:32:70.01:1132,70,0	0/0:7,0:7:19.81:0,20,206	0/0:30,0:6:15.89:0,16,186	0/0:55,0:11:29.92:0,30,351	1/1:17,11:33:74.05:1134,74,0	1/1:15,11:26:75.15:1183,75,0	1/1:12,8:20:55.07:968,55,0	1/1:37,3:31:70.92:946,71,0	0/0:21,0:20:57.14:0,57,1259	0/0:27,0:25:45.51:0,46,634	0/0:23,0:22:38.67:0,39,355	0/1:14,8:21:2.72:695,0,3	1/1:5,8:14:39.08:677,39,0	1/1:7,7:13:33.10:555,33,0	0/0:22,0:21:63.22:0,63,1534	1/1:6,7:14:36.12:647,36,0	1/1:20,8:27:78.08:1195,78,0	1/1:10,6:16:6.40:629,6,0	0/0:17,0:8:8.34:0,8,136	0/0:26,0:25:57.21:0,57,561	0/0:34,0:26:41.31:0,41,467	1/1:8,11:20:48.16:784,48,0	1/1:13,6:21:50.73:825,51,0	1/1:15,10:24:50.82:885,51,0	1/1:9,4:13:29.89:560,30,0	1/1:15,5:18:44.90:784,45,0	1/1:11,22:35:83.04:1748,83,0	1/1:4,2:6:0.71:177,1,0
chr10	30860129	.	CCACACA	C	3576.98	PASS	AB=0.978;AC=20;AF=0.357;AN=56;BaseQRankSum=-7.192;DP=674;FS=2.782;HRun=0;HaplotypeScore=202.3092;InbreedingCoeff=0.3440;MQ=45.50;MQ0=45;MQRankSum=-8.794;QD=12.13;ReadPosRankSum=-0.020;VQSLOD=3.0853;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:33:28.71:0,29,412	1/1:4,3:7:12.04:227,12,0	0/0:32,0:7:6.91:0,7,126	0/0:54,0:9:9.03:0,9,189	0/1:30,0:33:62.92:63,0,349	0/0:25,0:25:0.49:0,0,409	0/0:22,0:22:39.12:0,39,341	0/0:37,0:28:20.09:0,20,168	0/0:20,0:21:48.15:0,48,1123	1/1:19,8:25:41.20:772,41,0	1/1:10,12:23:49.70:864,50,0	0/0:19,0:20:33.94:0,34,307	0/1:14,0:14:5.66:6,0,230	0/1:15,0:13:21.96:22,0,141	0/0:23,0:22:48.16:0,48,1532	0/1:14,0:15:0.69:1,0,291	0/0:29,0:28:34.06:0,34,403	0/1:16,0:16:29.33:29,0,227	1/1:13,3:9:14.16:325,14,0	1/1:14,14:27:48.08:813,48,0	1/1:31,2:26:23.22:347,23,0	0/0:19,0:20:3.59:0,4,314	0/0:21,0:21:9.42:0,9,388	0/0:25,0:24:32.42:0,32,302	0/0:13,0:13:24.04:0,24,241	0/1:19,0:16:9.21:9,0,232	0/1:36,0:35:55.40:55,0,497	0/1:5,0:6:44.17:44,0,70
chr10	30860194	.	TA	T	10019.34	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=5.670;DP=537;FS=8.176;HRun=9;HaplotypeScore=91.4930;InbreedingCoeff=0.9809;MQ=73.62;MQ0=0;MQRankSum=-4.836;QD=21.73;ReadPosRankSum=3.389;VQSLOD=5.2533;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,25:30:69.02:631,69,0	1/1:1,13:14:39.02:357,39,0	0/0:23,0:19:32.77:0,33,420	0/0:17,0:16:33.10:0,33,380	1/1:5,24:29:63.01:575,63,0	1/1:5,20:25:60.02:549,60,0	1/1:3,9:12:18:165,18,0	1/1:6,18:24:51.02:466,51,0	0/0:18,0:18:48.12:0,48,541	1/1:2,21:23:63.03:576,63,0	1/1:6,15:21:42.01:384,42,0	1/1:3,13:16:39.02:356,39,0	1/1:2,14:16:42.02:384,42,0	1/1:3,10:13:30.01:275,30,0	0/0:17,0:18:50.97:0,51,559	1/1:0,11:11:33.02:302,33,0	1/1:2,22:23:63.03:577,63,0	1/1:4,14:18:36:329,36,0	1/1:4,21:25:60.03:549,60,0	1/1:6,21:27:60.03:549,60,0	1/1:1,11:12:27.01:247,27,0	1/1:0,16:16:39.01:357,39,0	1/1:3,17:20:44.54:411,45,0	1/1:3,12:14:36.02:329,36,0	1/1:0,18:19:50.77:451,51,0	1/1:1,21:22:63.01:570,63,0	1/1:3,20:24:62.04:549,62,0	1/1:1,4:5:9:82,9,0
chr10	30864450	.	G	GTCATCATCATCATCGTCGTCGTCGTCA	39843.18	PASS	AB=1.000;AC=45;AF=0.804;AN=56;BaseQRankSum=7.633;DP=925;FS=4.883;HRun=0;HaplotypeScore=654.6879;InbreedingCoeff=0.6280;MQ=52.84;MQ0=3;MQRankSum=-8.871;QD=48.71;ReadPosRankSum=4.453;VQSLOD=0.0090;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:51,0:50:26.08:1097,26,0	1/1:16,0:16:21.07:1879,21,0	0/0:21,0:15:11.13:0,11,528	0/0:25,0:24:36.67:0,37,1252	1/1:36,0:36:3.52:310,4,0	0/1:42,0:42:0.54:1864,0,1	0/1:35,0:35:6.18:626,0,6	1/1:68,0:58:89.07:1826,89,0	0/0:35,0:35:73.06:0,73,4685	1/1:52,0:51:99:5382,119,0	1/1:22,0:21:12.51:925,13,0	1/1:34,0:34:32.51:2103,33,0	1/1:39,0:39:48.87:3063,49,0	1/1:41,0:41:17.11:2245,17,0	0/0:26,0:25:66.18:0,66,2915	0/1:35,0:35:99:1333,0,168	1/1:26,0:26:26.84:1098,27,0	1/1:14,0:14:28.88:638,29,0	1/1:39,0:38:73.46:3343,73,0	1/1:5,3:36:9.03:1114,9,0	1/1:32,0:32:25.70:444,26,0	1/1:41,0:41:23.47:1646,23,0	1/1:33,0:33:15.53:1194,16,0	1/1:22,0:22:11.25:1001,11,0	1/1:26,0:26:4.25:1193,4,0	1/1:37,0:36:77.29:2653,77,0	1/1:29,0:29:46.50:2780,46,0	1/1:12,0:12:13.95:85,14,0
chr10	30865667	.	AT	A	5391.30	PASS	AC=40;AF=0.741;AN=54;BaseQRankSum=-4.689;DP=334;FS=7.450;HRun=8;HaplotypeScore=40.9283;InbreedingCoeff=0.8772;MQ=74.29;MQ0=1;MQRankSum=-3.252;QD=21.48;ReadPosRankSum=2.591;VQSLOD=4.7972;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,15:15:39.06:376,39,0	1/1:1,5:6:12.02:116,12,0	0/0:25,0:14:14.61:0,15,164	0/0:12,0:6:9.01:0,9,106	1/1:3,14:17:36.06:347,36,0	1/1:1,11:12:21.03:202,21,0	1/1:2,5:7:9.01:87,9,0	1/1:3,25:28:75.04:699,75,0	0/0:6,0:6:12.02:0,12,133	1/1:4,20:24:56.77:541,57,0	1/1:0,9:9:23.99:222,24,0	1/1:2,7:9:12.02:116,12,0	1/1:0,9:9:24.04:232,24,0	1/1:0,7:7:15.02:145,15,0	0/0:8,0:8:21.05:0,21,242	1/1:0,4:4:5.86:58,6,0	1/1:1,19:20:48.08:463,48,0	1/1:1,12:13:33.05:319,33,0	0/0:18,0:18:41.99:0,42,473	0/0:10,0:10:30.07:0,30,337	0/0:3,0:3:6:0,6,60	./.	1/1:3,2:5:6:55,6,0	1/1:0,3:3:6.01:58,6,0	1/1:3,14:17:30.04:290,30,0	1/1:0,11:11:33.04:314,33,0	1/1:1,22:23:51.08:492,51,0	1/1:3,9:12:27.04:261,27,0
chr10	30866381	.	TA	T	1796.03	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-3.456;DP=661;FS=7.097;HRun=8;HaplotypeScore=116.1383;InbreedingCoeff=0.9273;MQ=61.15;MQ0=2;MQRankSum=2.345;QD=22.73;ReadPosRankSum=0.331;VQSLOD=2.7903;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:26:72.15:0,72,828	0/0:11,0:11:32.76:0,33,245	0/0:12,0:8:6.02:0,6,72	0/0:9,0:9:6.01:0,6,60	0/0:55,0:55:99:0,144,1672	0/0:22,0:22:63.04:0,63,710	0/0:14,0:14:42.13:0,42,507	0/0:31,0:31:78.23:0,78,933	0/0:21,0:21:60.18:0,60,720	0/0:32,0:32:91.27:0,91,584	0/0:32,0:32:86.42:0,86,648	0/0:19,0:19:56.98:0,57,621	0/0:10,0:10:24.07:0,24,290	0/0:21,0:21:54.17:0,54,650	0/0:15,0:15:45.14:0,45,543	0/0:20,0:20:45.05:0,45,511	0/0:24,0:23:54.08:0,54,630	0/0:16,0:16:42.13:0,42,507	1/1:3,25:28:75.09:714,75,0	1/1:1,29:30:78.01:732,78,0	1/1:4,17:21:51.07:492,51,0	0/0:38,0:38:96.23:0,96,1116	0/0:27,0:27:75.23:0,75,905	0/0:25,0:25:66.15:0,66,780	0/0:23,0:23:57.12:0,57,670	0/0:41,0:41:99:0,114,1327	0/0:30,0:30:84.16:0,84,981	0/0:7,0:7:21.06:0,21,254
chr10	30868617	.	GA	G	735.43	PASS	AB=0.559;AC=4;AF=0.071;AN=56;BaseQRankSum=-0.046;DP=376;FS=28.083;HRun=1;HaplotypeScore=76.5698;InbreedingCoeff=0.5430;MQ=55.86;MQ0=21;MQRankSum=-0.041;QD=12.90;ReadPosRankSum=-3.081;VQSLOD=0.4422;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:26:40.50:0,40,515	0/0:2,0:2:6.02:0,6,76	0/0:14,0:6:15.05:0,15,183	0/0:26,0:13:39.10:0,39,453	0/0:20,0:19:39.12:0,39,487	0/0:8,0:7:18.06:0,18,229	0/0:11,0:11:27.08:0,27,335	0/0:24,0:23:69.17:0,69,833	0/0:10,0:10:24.08:0,24,315	0/0:10,0:10:27.08:0,27,330	0/0:13,0:13:27.09:0,27,343	0/0:11,0:11:23.17:0,23,271	0/0:13,0:13:26.58:0,27,294	0/0:14,0:12:23.37:0,23,288	0/0:11,0:10:27.09:0,27,343	0/0:10,0:10:24.08:0,24,304	0/0:11,0:10:16.60:0,17,193	0/0:5,0:5:15.05:0,15,190	0/1:4,14:14:6.57:293,0,7	0/1:4,15:17:4.03:352,0,4	1/1:5,14:11:15.05:202,15,0	0/0:10,0:9:18.54:0,19,234	0/0:13,0:12:27.56:0,28,317	0/0:17,0:16:20.96:0,21,252	0/0:12,0:12:24.05:0,24,289	0/0:14,0:14:38.76:0,39,489	0/0:8,0:8:17.03:0,17,217	0/0:5,0:5:9.03:0,9,115
chr10	30869971	.	GAA	G	4251.57	PASS	AB=0.674;AC=38;AF=0.679;AN=56;BaseQRankSum=-1.601;DP=474;FS=3.971;HRun=16;HaplotypeScore=75.4094;InbreedingCoeff=0.3287;MQ=60.43;MQ0=7;MQRankSum=1.622;QD=11.46;ReadPosRankSum=4.732;VQSLOD=4.0903;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:17,13:33:40.53:364,41,0	0/0:1,0:4:2.37:0,2,8	0/0:36,0:12:10.54:0,11,113	0/0:28,0:10:0.93:0,1,5	1/1:5,15:20:38.36:311,38,0	1/1:2,7:10:8.92:117,9,0	1/1:3,6:9:11.54:86,12,0	1/1:16,7:22:4.92:165,5,0	0/0:10,0:10:18.06:0,18,235	0/0:15,0:21:29.70:0,30,188	0/1:7,1:12:11.26:11,0,68	0/1:7,4:9:41.29:79,0,41	1/1:4,6:10:11.89:100,12,0	0/1:6,5:11:61.87:88,0,62	0/0:4,0:4:6:0,6,63	1/1:7,11:18:32.40:275,32,0	1/1:5,9:14:29.56:237,30,0	1/1:4,18:23:44.62:363,45,0	0/1:10,13:23:33.70:211,0,34	1/1:3,10:14:32.60:262,33,0	0/1:5,3:9:34.20:78,0,34	1/1:5,7:13:20.70:169,21,0	1/1:5,10:16:20.91:217,21,0	0/1:7,12:19:1.56:258,0,2	1/1:14,11:26:0.22:268,0,0	1/1:7,10:17:6.61:196,7,0	1/1:4,13:17:5.84:202,6,0	1/1:5,11:19:4.98:194,5,0
chr10	30871152	.	CTT	C	544.91	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=0.319;DP=225;FS=3.240;HRun=9;HaplotypeScore=47.3692;InbreedingCoeff=0.6443;MQ=72.38;MQ0=0;MQRankSum=-1.095;QD=22.70;ReadPosRankSum=0.305;VQSLOD=2.3325;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:63.14:0,63,916	1/1:0,3:3:9.03:105,9,0	0/0:8,0:6:7.32:0,7,87	0/0:10,0:9:6.70:0,7,83	0/0:10,0:10:30.02:0,30,434	0/0:7,0:7:12.04:0,12,197	0/0:4,0:3:8.99:0,9,118	0/0:15,0:15:39.13:0,39,612	0/0:9,0:9:15.05:0,15,246	1/1:2,8:10:24.06:279,24,0	1/1:4,7:11:26.99:295,27,0	0/0:3,0:3:5.99:0,6,62	0/0:4,0:4:9.01:0,9,101	0/0:6,0:6:9.03:0,9,147	0/0:4,0:4:9.03:0,9,131	0/0:3,0:3:9.02:0,9,123	0/0:7,0:7:21.04:0,21,298	0/0:11,0:11:21.07:0,21,345	0/0:2,0:7:14.85:0,15,52	0/0:8,0:12:14.72:0,15,51	0/0:2,0:6:11.34:0,11,37	0/0:2,0:2:3.01:0,3,49	0/0:3,0:3:3.01:0,3,49	0/0:2,0:2:3.01:0,3,49	0/0:15,0:15:27.09:0,27,435	0/0:12,0:12:32.60:0,33,477	0/0:4,0:4:12.04:0,12,189	0/0:13,0:13:33.11:0,33,542
chr10	30871207	.	CT	C	2095.48	PASS	AB=1.000;AC=43;AF=0.977;AN=44;BaseQRankSum=-0.866;DP=109;FS=0.000;HRun=4;HaplotypeScore=22.5542;InbreedingCoeff=-0.0823;MQ=45.71;MQ0=20;MQRankSum=1.678;QD=21.60;ReadPosRankSum=1.624;VQSLOD=2.0626;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,7:9:18.05:210,18,0	1/1:1,1:2:3.01:36,3,0	0/1:12,0:2:9.91:12,0,10	./.	1/1:0,7:6:18.06:215,18,0	1/1:1,7:8:18.05:215,18,0	1/1:0,2:1:3.01:36,3,0	1/1:2,3:4:8.98:81,9,0	1/1:0,2:2:6.02:72,6,0	1/1:1,3:4:9.02:98,9,0	1/1:2,4:3:9.03:107,9,0	1/1:0,1:1:3.01:36,3,0	./.	1/1:0,4:4:6.02:72,6,0	1/1:0,1:1:3.01:36,3,0	./.	1/1:0,3:3:9.03:108,9,0	1/1:0,5:5:9.03:108,9,0	1/1:3,3:5:9.03:108,9,0	1/1:0,2:2:6:59,6,0	./.	./.	./.	1/1:0,1:1:3.01:36,3,0	1/1:1,5:6:15.05:180,15,0	1/1:0,2:1:3.01:36,3,0	1/1:0,4:4:12.04:141,12,0	1/1:0,5:5:15.05:180,15,0
chr10	30871237	.	T	TAAG	1001.41	PASS	AB=0.625;AC=23;AF=0.885;AN=26;BaseQRankSum=2.141;DP=46;FS=0.000;HRun=0;HaplotypeScore=25.4570;InbreedingCoeff=0.0505;MQ=25.48;MQ0=16;MQRankSum=-2.246;QD=31.29;ReadPosRankSum=2.037;VQSLOD=3.0604;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:2,3:4:10.96:159,0,11	1/1:1,0:1:3.01:37,3,0	./.	./.	1/1:1,2:2:2.97:20,3,0	1/1:1,2:3:9.03:160,9,0	./.	1/1:1,1:1:3.01:62,3,0	./.	1/1:3,1:3:9.03:153,9,0	./.	./.	./.	1/1:0,2:2:3.01:59,3,0	./.	./.	1/1:1,0:2:5.99:82,6,0	0/0:1,0:1:3.01:0,3,42	1/1:2,0:1:3.01:42,3,0	1/1:0,1:1:3.01:55,3,0	./.	./.	./.	./.	./.	./.	1/1:2,2:4:12.04:222,12,0	1/1:2,0:1:3.01:39,3,0
chr10	30871238	.	C	CCCT	603.14	PASS	AB=0.800;AC=17;AF=0.773;AN=22;BaseQRankSum=0.212;DP=44;FS=0.000;HRun=0;HaplotypeScore=25.6616;InbreedingCoeff=0.2207;MQ=22.70;MQ0=16;MQRankSum=1.799;QD=25.13;ReadPosRankSum=2.646;VQSLOD=3.2692;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,3:3:9.03:148,9,0	0/0:1,0:1:2.94:0,3,18	./.	./.	./.	1/1:1,2:3:9:129,9,0	./.	1/1:2,1:1:3.01:55,3,0	./.	0/1:3,1:3:5.87:50,0,6	./.	./.	./.	1/1:0,2:2:3.01:52,3,0	./.	./.	1/1:1,0:1:3.01:31,3,0	./.	1/1:2,0:1:3:28,3,0	1/1:0,1:1:3.01:42,3,0	./.	./.	./.	./.	./.	./.	1/1:2,2:4:12.02:158,12,0	0/0:2,0:1:2.90:0,3,16
chr10	30871893	.	TC	T	137.10	PASS	AC=10;AF=0.714;AN=14;BaseQRankSum=-0.715;DP=29;FS=0.000;HRun=8;HaplotypeScore=8.0283;MQ=27.29;MQ0=1;MQRankSum=-0.978;QD=9.79;ReadPosRankSum=-1.531;VQSLOD=-0.7466;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	./.	1/1:0,4:4:9.01:86,9,0	./.	./.	0/0:4,0:2:6.02:0,6,72	./.	./.	1/1:0,1:1:3:29,3,0	./.	1/1:0,3:3:3:29,3,0	0/0:3,0:2:3.01:0,3,36	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	1/1:1,2:2:5.96:48,6,0	1/1:0,3:3:3:29,3,0	./.
chr10	30872036	.	GTA	G	110.38	PASS	AC=4;AF=0.091;AN=44;BaseQRankSum=3.210;DP=305;FS=0.000;HRun=0;HaplotypeScore=38.1328;InbreedingCoeff=0.6312;MQ=35.66;MQ0=40;MQRankSum=-3.009;QD=7.36;ReadPosRankSum=0.343;VQSLOD=2.7939;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:75.26:0,75,1345	./.	./.	0/0:4,0:1:3.01:0,3,54	0/0:10,0:6:18.06:0,18,323	0/0:12,0:9:18.06:0,18,323	0/0:13,0:10:9.03:0,9,162	0/0:22,0:3:8.99:0,9,127	0/0:13,0:11:30.10:0,30,532	1/1:0,1:1:3.01:42,3,0	./.	0/0:9,0:9:15.05:0,15,270	0/0:9,0:8:21.07:0,21,378	0/0:9,0:9:24.08:0,24,431	0/0:10,0:9:21.07:0,21,378	0/0:10,0:10:24.08:0,24,430	0/0:26,0:23:54.18:0,54,949	0/0:12,0:9:18.06:0,18,324	1/1:9,5:5:12.04:168,12,0	./.	./.	0/0:30,0:9:18.06:0,18,323	0/0:14,0:5:3.01:0,3,54	0/0:13,0:12:27.08:0,27,455	./.	0/0:11,0:8:24.08:0,24,432	0/0:8,0:7:9.03:0,9,161	0/0:4,0:4:12.04:0,12,216
chr10	30877171	.	TTTGA	T	251.09	PASS	AC=2;AF=0.042;AN=48;BaseQRankSum=3.412;DP=491;FS=10.788;HRun=0;HaplotypeScore=51.1184;InbreedingCoeff=0.6258;MQ=29.63;MQ0=137;MQRankSum=-2.308;QD=20.92;ReadPosRankSum=2.385;VQSLOD=2.0034;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:20:36.12:0,36,923	0/0:5,0:5:9.03:0,9,242	./.	./.	0/0:27,0:11:24.01:0,24,583	0/0:19,0:9:21.07:0,21,474	0/0:15,0:2:3.01:0,3,57	0/0:32,0:1:3.01:0,3,81	0/0:20,0:17:39.13:0,39,1014	0/0:23,0:13:39.12:0,39,870	0/0:33,0:22:53.21:0,53,1361	0/0:13,0:7:15.05:0,15,349	0/0:16,0:6:12.04:0,12,196	0/0:11,0:6:9.03:0,9,241	0/0:22,0:16:39.13:0,39,919	0/0:17,0:7:18.06:0,18,440	0/0:22,0:17:30.10:0,30,759	0/0:26,0:20:51.17:0,51,1218	./.	1/1:4,8:8:18.06:340,18,0	./.	0/0:23,0:14:36.12:0,36,925	0/0:19,0:9:24.08:0,24,626	0/0:19,0:13:24.08:0,24,564	0/0:24,0:14:39.13:0,39,941	0/0:20,0:10:27.09:0,27,689	0/0:25,0:14:33.11:0,33,757	0/0:11,0:8:15.05:0,15,390
chr10	30878247	.	AT	A	984.90	PASS	AC=6;AF=0.429;AN=14;BaseQRankSum=-0.907;DP=105;FS=3.097;HRun=9;HaplotypeScore=61.7820;MQ=129.85;MQ0=0;MQRankSum=-2.116;QD=20.96;ReadPosRankSum=2.491;VQSLOD=4.5917;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:23,0:20:29.35:0,29,262	0/0:10,0:9:8.23:0,8,125	./.	./.	./.	./.	0/0:8,0:8:21.04:0,21,222	./.	./.	./.	./.	./.	0/0:17,0:17:39.06:0,39,425	./.	./.	./.	1/1:3,16:19:48:435,48,0	1/1:2,19:21:56.99:514,57,0	1/1:0,7:7:15.01:137,15,0	./.	./.	./.	./.	./.	./.	./.
chr10	30878744	.	G	GAGAA	6409.06	PASS	AB=1.000;AC=46;AF=0.885;AN=52;BaseQRankSum=1.179;DP=589;FS=8.127;HRun=0;HaplotypeScore=167.4445;InbreedingCoeff=0.2502;MQ=51.51;MQ0=8;MQRankSum=-2.349;QD=12.02;ReadPosRankSum=-0.290;VQSLOD=3.5425;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:29:26.65:226,27,0	0/1:9,0:10:12.42:12,0,43	./.	./.	1/1:28,0:28:30.15:261,30,0	1/1:26,0:26:47.73:520,48,0	1/1:19,0:17:28.29:203,28,0	1/1:29,0:27:28.42:185,28,0	0/0:25,0:25:45.10:0,45,617	0/1:30,0:33:26.72:27,0,93	0/1:13,0:18:18.09:18,0,47	1/1:20,0:20:35.91:368,36,0	1/1:19,0:19:26.83:274,27,0	1/1:17,0:17:27.65:217,28,0	1/1:3,17:22:18.06:398,18,0	1/1:24,0:24:35.68:281,36,0	1/1:19,0:19:30.20:261,30,0	1/1:11,0:11:17.77:144,18,0	1/1:15,0:13:9.03:200,9,0	1/1:22,0:22:23.62:407,24,0	1/1:23,0:23:45.09:856,45,0	1/1:21,0:21:29.87:266,30,0	1/1:16,0:15:11.98:127,12,0	0/1:25,0:25:18.66:111,0,19	1/1:14,0:14:24.04:269,24,0	1/1:26,0:26:23.75:321,24,0	1/1:28,0:28:32.27:266,32,0	1/1:17,0:17:27.23:192,27,0
chr10	30878767	.	AAAGAAAGAAAGG	A	2345.16	PASS	AB=1.000;AC=18;AF=0.321;AN=56;BaseQRankSum=0.381;DP=553;FS=1.371;HRun=0;HaplotypeScore=285.5068;InbreedingCoeff=0.0447;MQ=46.62;MQ0=6;MQRankSum=2.651;QD=7.37;ReadPosRankSum=-10.130;VQSLOD=-0.0493;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:36.24:0,36,792	1/1:11,0:11:29.88:438,30,0	0/0:9,0:4:12:0,12,137	0/0:9,0:5:12.45:0,12,108	0/0:22,0:22:11.34:0,11,981	0/1:28,0:28:53.13:53,0,1439	0/1:18,0:16:20.66:21,0,607	0/1:27,0:25:64.10:64,0,733	0/0:24,0:24:72.22:0,72,2785	1/1:4,27:30:82.42:1182,82,0	1/1:16,0:16:32.91:511,33,0	0/1:22,0:22:49.47:49,0,1024	0/0:19,0:18:12.71:0,13,884	0/1:18,0:18:2.17:2,0,702	0/0:24,0:24:33.10:0,33,1148	0/1:25,0:25:12.83:13,0,1017	0/0:17,0:17:25.13:0,25,931	0/1:13,0:13:10.11:10,0,469	0/1:14,0:10:79.94:80,0,466	0/1:15,0:15:13.95:14,0,890	0/1:26,0:26:48.91:49,0,1383	0/0:12,0:12:33.11:0,33,909	0/0:8,0:8:18.02:0,18,307	0/1:27,0:27:29.29:29,0,354	0/0:12,0:12:15.12:0,15,743	0/0:27,0:27:37.91:0,38,1502	0/1:27,0:27:0.64:1,0,1180	0/0:22,0:22:5.21:0,5,969
chr10	30878778	.	G	GAAA	4590.82	PASS	AB=0.942;AC=26;AF=0.464;AN=56;BaseQRankSum=-4.259;DP=551;FS=8.211;HRun=3;HaplotypeScore=198.8508;InbreedingCoeff=-0.3242;MQ=48.95;MQ0=3;MQRankSum=-1.665;QD=10.16;ReadPosRankSum=0.585;VQSLOD=0.7625;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:27,1:27:60.62:203,0,61	0/0:9,0:9:16.77:0,17,133	0/0:8,0:5:14.88:0,15,193	0/0:8,0:8:20.86:0,21,261	0/1:18,2:20:68.58:174,0,69	0/1:23,6:29:99:356,0,100	0/1:19,0:17:99:135,0,115	0/1:28,0:27:88.77:98,0,89	0/0:29,0:29:84.28:0,84,1381	0/0:31,0:30:55.83:0,56,391	0/0:14,0:14:31.81:0,32,227	0/1:21,2:23:68:413,0,68	0/1:16,2:18:76.91:236,0,77	0/1:17,1:18:39.25:181,0,39	0/1:25,0:24:98.13:98,0,218	0/1:26,0:26:99:168,0,113	1/1:17,1:18:13.74:255,14,0	0/1:12,1:13:81.28:84,0,81	0/1:11,1:9:66.29:130,0,66	0/1:15,2:17:99:267,0,107	0/1:24,7:31:99:513,0,165	1/1:11,1:12:6.60:313,7,0	1/1:6,1:7:14.83:158,15,0	0/1:28,0:28:63.46:63,0,87	1/1:8,2:10:9.47:285,9,0	0/1:25,0:25:71.93:171,0,72	0/1:23,1:24:83.38:192,0,83	0/1:20,0:20:61.36:98,0,61
chr10	30878779	.	G	GAGGGAAAGA	13250.35	PASS	AB=0.942;AC=34;AF=0.607;AN=56;BaseQRankSum=9.307;DP=547;FS=3.281;HRun=0;HaplotypeScore=263.9968;InbreedingCoeff=0.1614;MQ=48.86;MQ0=3;MQRankSum=-9.365;QD=28.56;ReadPosRankSum=4.324;VQSLOD=3.8018;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:27,1:27:43.09:910,43,0	0/1:9,0:9:25.88:26,0,170	0/0:8,0:5:15.02:0,15,383	0/0:8,0:8:20.91:0,21,445	1/1:17,2:19:30.63:762,31,0	1/1:23,6:29:58.64:1683,59,0	0/1:18,0:16:0.53:312,0,1	0/1:26,0:25:16.16:184,0,16	0/0:29,0:29:87.18:0,87,2297	0/1:31,0:30:28.15:28,0,576	0/0:13,0:13:13.14:0,13,322	1/1:21,2:23:38.52:1012,39,0	1/1:17,2:19:53.11:888,53,0	1/1:17,1:18:8.10:736,8,0	0/0:25,0:24:35.97:0,36,603	1/1:26,0:26:49.34:1045,49,0	1/1:17,1:18:18.23:857,18,0	0/1:12,1:13:7.60:345,0,8	0/1:11,0:9:57.84:58,0,184	0/1:15,0:17:99:150,0,210	0/1:24,0:31:99:282,0,363	0/1:11,0:12:3.29:510,0,3	1/1:6,1:7:8.70:213,9,0	0/1:30,0:30:15.52:563,0,16	0/1:7,2:9:1.85:459,0,2	1/1:25,0:25:41.54:838,42,0	1/1:24,0:24:15.83:967,16,0	0/1:19,0:19:15.48:424,0,15
chr10	30878781	.	AGGAAGGAC	A	10088.62	PASS	AB=1.000;AC=30;AF=0.536;AN=56;BaseQRankSum=0.087;DP=550;FS=11.937;HRun=0;HaplotypeScore=229.2509;InbreedingCoeff=0.1672;MQ=51.22;MQ0=3;MQRankSum=-6.377;QD=24.43;ReadPosRankSum=0.741;VQSLOD=3.1164;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:27:38.66:906,39,0	1/1:9,0:9:23.96:263,24,0	0/0:10,0:7:21.07:0,21,560	0/0:8,0:8:21.07:0,21,548	0/1:19,0:19:35.31:362,0,35	0/1:27,0:27:99:775,0,106	1/1:17,0:15:24.44:464,24,0	1/1:10,15:24:42.06:714,42,0	0/0:31,0:31:87.30:0,87,2918	1/1:32,0:30:64.54:699,65,0	1/1:13,0:13:18.90:182,19,0	0/1:23,0:23:57.09:659,0,57	0/1:23,0:22:99:626,0,104	1/1:17,0:17:29.77:510,30,0	0/0:24,0:23:42.14:0,42,1357	1/1:25,0:25:26.51:709,27,0	0/1:18,0:18:47.18:188,0,47	0/1:13,0:13:34.45:353,0,34	0/0:14,0:11:32.86:0,33,427	0/0:17,0:17:41.78:0,42,661	0/0:33,0:33:92.90:0,93,1641	0/1:12,0:12:48.15:131,0,48	0/1:7,0:7:0.54:25,0,1	1/1:31,0:31:41.98:694,42,0	0/1:9,0:9:54.78:65,0,55	0/1:26,0:26:99:646,0,154	0/1:23,0:23:76.34:712,0,76	0/1:16,0:16:90.50:406,0,91
chr10	30878785	.	AGGAC	A	8678.36	PASS	AB=1.000;AC=40;AF=0.714;AN=56;BaseQRankSum=4.740;DP=486;FS=2.514;HRun=0;HaplotypeScore=180.1658;InbreedingCoeff=0.7966;MQ=53.82;MQ0=3;MQRankSum=-7.800;QD=24.80;ReadPosRankSum=2.491;VQSLOD=4.9569;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:22:59.93:680,60,0	1/1:7,1:8:21.07:337,21,0	0/0:10,0:7:21.06:0,21,354	0/0:10,0:10:27.05:0,27,406	1/1:15,0:15:18.94:317,19,0	1/1:26,0:26:20.67:590,21,0	1/1:12,0:10:29.96:329,30,0	1/1:16,0:15:42.07:513,42,0	0/0:31,0:31:90.17:0,90,1810	1/1:27,3:28:66.19:1039,66,0	1/1:0,13:13:29.66:337,30,0	1/1:19,0:19:26.41:482,26,0	1/1:19,0:19:17.24:428,17,0	1/1:11,0:11:32.11:366,32,0	0/0:21,0:20:45.10:0,45,848	1/1:21,0:21:54.98:593,55,0	1/1:15,0:15:9.20:184,9,0	1/1:10,0:10:19.13:273,19,0	0/0:15,0:13:0.60:0,1,158	0/0:14,0:14:8.35:0,8,176	0/0:35,0:35:17.44:0,17,521	0/1:7,0:7:0.69:86,0,1	1/1:6,0:6:5.74:40,6,0	1/1:23,0:23:41.94:466,42,0	0/1:8,0:8:3.47:56,0,3	1/1:30,0:30:68.32:681,68,0	1/1:22,0:22:49.79:578,50,0	1/1:15,0:15:28.44:305,28,0
chr10	30879273	.	C	CACAT	3996.88	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-2.600;DP=580;FS=3.417;HRun=0;HaplotypeScore=139.5018;InbreedingCoeff=0.9565;MQ=57.01;MQ0=8;MQRankSum=-2.259;QD=52.59;ReadPosRankSum=1.262;VQSLOD=4.8745;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:56.91:0,57,893	0/0:5,0:5:14.89:0,15,174	0/0:42,0:25:66.20:0,66,1164	0/0:42,0:20:52.06:0,52,914	0/0:20,0:20:30.57:0,31,527	0/0:22,0:20:30.18:0,30,467	0/0:24,0:24:37.53:0,38,564	0/0:21,0:21:55.69:0,56,697	0/0:28,0:27:81.20:0,81,1374	0/0:24,0:24:57.35:0,57,1026	0/0:9,0:9:18.53:0,19,300	0/0:14,0:14:34.96:0,35,518	0/0:17,0:15:38.59:0,39,589	0/0:11,0:11:27.08:0,27,421	0/0:23,0:23:60.17:0,60,1064	0/0:16,0:16:14.74:0,15,214	0/0:21,0:21:54:0,54,786	0/0:11,0:11:7.46:0,7,375	1/1:6,10:16:42.12:880,42,0	1/1:6,11:17:41.90:939,42,0	1/1:6,36:42:90.12:2178,90,0	0/0:11,0:11:27.06:0,27,368	0/0:19,0:19:42.14:0,42,691	0/0:21,0:21:27:0,27,422	0/0:14,0:14:33:0,33,491	0/0:20,0:19:39.76:0,40,690	0/0:23,0:23:43.85:0,44,730	0/0:13,0:13:27.09:0,27,492
chr10	30879283	.	T	TACACAC	2915.74	PASS	AB=1.000;AC=38;AF=0.704;AN=54;BaseQRankSum=1.024;DP=612;FS=11.191;HRun=0;HaplotypeScore=165.9441;InbreedingCoeff=0.4908;MQ=53.83;MQ0=10;MQRankSum=-0.869;QD=7.29;ReadPosRankSum=-1.280;VQSLOD=2.0064;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:40,0:40:11.71:186,12,0	1/1:2,1:4:3.01:98,3,0	0/0:47,0:25:8.97:0,9,150	0/0:51,0:27:8.19:0,8,207	1/1:22,0:22:8.60:98,9,0	1/1:24,0:21:6.01:65,6,0	1/1:24,0:22:2.55:48,3,0	0/1:30,0:30:24.46:406,0,24	0/0:27,0:27:42.11:0,42,807	1/1:10,9:22:39.09:930,39,0	1/1:3,4:10:8.77:198,9,0	1/1:10,0:21:2.57:76,3,0	1/1:15,0:13:5.98:53,6,0	1/1:9,1:18:3.01:77,3,0	0/0:20,0:20:27.08:0,27,512	1/1:16,0:16:5.85:80,6,0	1/1:22,0:22:17.20:228,17,0	0/1:11,0:11:13.84:61,0,14	0/1:14,0:12:0:0,0,0	0/0:8,0:13:9.03:0,9,121	0/0:32,0:38:19.83:0,20,219	1/1:11,0:11:2.99:24,3,0	1/1:18,0:17:3.01:88,3,0	0/1:20,0:20:0:0,0,0	./.	1/1:23,0:22:14.99:172,15,0	1/1:20,0:20:6.59:81,7,0	1/1:15,0:15:11.98:114,12,0
chr10	30880401	.	T	TTTCACTGCA	30683.09	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=-10.873;DP=636;FS=3.058;HRun=0;HaplotypeScore=155.7616;InbreedingCoeff=0.9544;MQ=81.23;MQ0=0;MQRankSum=-13.585;QD=65.84;ReadPosRankSum=-0.482;VQSLOD=4.7000;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:18,22:42:63.17:2782,63,0	1/1:3,6:8:21.03:843,21,0	0/0:26,0:26:42.13:0,42,1033	0/0:22,0:22:33.07:0,33,778	1/1:8,9:19:27.02:1070,27,0	1/1:7,9:18:27.09:1247,27,0	1/1:14,9:24:36.12:1580,36,0	1/1:36,3:41:33.07:977,33,0	0/0:25,0:25:60.21:0,60,1626	1/1:13,17:32:60.21:2713,60,0	1/1:9,7:17:33.11:1463,33,0	1/1:7,7:14:27.09:1154,27,0	1/1:12,14:27:48.16:2206,48,0	1/1:6,8:17:24.08:1108,24,0	0/0:31,0:31:72.22:0,72,1920	1/1:8,9:19:27.09:1246,27,0	1/1:9,17:27:48.16:2195,48,0	1/1:8,3:12:9.03:393,9,0	0/0:19,0:19:33.11:0,33,835	0/0:24,0:24:54.14:0,54,1342	0/0:23,0:23:54.17:0,54,1434	1/1:15,14:32:48.16:2161,48,0	1/1:8,17:26:36.12:1661,36,0	1/1:12,7:23:18.02:712,18,0	1/1:6,6:12:21.07:969,21,0	1/1:10,12:21:48.16:1879,48,0	1/1:16,13:29:51.18:2261,51,0	1/1:1,0:1:3.01:66,3,0
chr10	30880632	.	GGTGT	G	2142.17	PASS	AB=0.851;AC=29;AF=0.558;AN=52;BaseQRankSum=0.226;DP=652;FS=0.676;HRun=0;HaplotypeScore=119.2025;InbreedingCoeff=0.2420;MQ=50.53;MQ0=41;MQRankSum=1.884;QD=5.20;ReadPosRankSum=-0.853;VQSLOD=2.0540;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:19,21:39:6.02:94,6,0	0/0:7,0:6:3:0,3,25	./.	./.	1/1:23,4:27:13.80:175,14,0	1/1:19,0:19:11.76:109,12,0	0/1:16,0:15:6.10:129,0,6	0/1:24,0:22:11.02:13,0,11	0/0:18,0:21:33.03:0,33,548	0/0:25,0:26:36.01:0,36,530	0/0:11,0:12:9.03:0,9,143	0/1:21,1:20:12.51:144,0,13	1/1:8,4:12:6.02:94,6,0	1/1:7,3:10:17.51:160,18,0	0/0:21,0:26:21.46:0,21,343	1/1:7,15:22:12.04:188,12,0	1/1:16,1:25:0.63:173,1,0	0/1:12,13:25:5.03:233,0,5	0/0:22,0:19:5.98:0,6,49	0/1:19,0:18:0.07:0,0,0	0/0:56,0:49:17.99:0,18,168	0/1:28,2:30:2.11:172,0,2	0/1:10,9:20:15.09:58,0,15	0/1:16,10:25:16.59:92,0,17	1/1:13,1:18:14.74:152,15,0	0/1:20,6:23:28.98:226,0,29	1/1:10,8:17:2.58:47,3,0	1/1:1,6:7:3.01:47,3,0
chr10	30880679	.	ATG	A	462.89	PASS	AB=0.906;AC=10;AF=0.179;AN=56;BaseQRankSum=3.372;DP=550;FS=0.000;HRun=0;HaplotypeScore=119.6629;InbreedingCoeff=0.4959;MQ=54.74;MQ0=24;MQRankSum=-1.279;QD=4.25;ReadPosRankSum=0.633;VQSLOD=2.6665;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:41:39.11:0,39,576	1/1:4,6:8:8.97:112,9,0	0/0:23,0:17:45.04:0,45,662	0/0:25,0:19:33.48:0,33,661	0/0:25,0:24:11.98:0,12,143	0/0:19,0:18:29.96:0,30,461	0/0:26,0:26:48.15:0,48,733	0/0:25,0:24:62.01:0,62,953	0/0:19,0:18:33.11:0,33,544	0/1:8,12:20:9.78:363,0,10	1/1:10,0:9:8.51:71,9,0	0/0:15,0:13:21.04:0,21,294	0/0:14,0:14:29.95:0,30,421	0/0:11,0:11:14.83:0,15,188	0/0:15,0:14:20.99:0,21,283	0/1:21,0:21:10.50:11,0,264	0/0:25,0:25:31.02:0,31,441	0/0:22,0:22:28.74:0,29,335	0/1:10,0:5:0.03:0,0,0	1/1:10,0:10:2.65:20,3,0	0/0:23,0:20:0.39:0,0,1	0/0:20,0:19:12.01:0,12,158	0/1:28,0:25:22.48:22,0,148	0/0:21,0:18:18.01:0,18,231	0/0:23,0:23:24.06:0,24,361	0/0:19,0:18:39.03:0,39,561	0/0:19,0:19:35.85:0,36,520	0/0:10,0:10:15.01:0,15,217
chr10	30880681	.	G	GTA	493.77	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=2.864;DP=550;FS=0.790;HRun=0;HaplotypeScore=119.0173;InbreedingCoeff=0.7326;MQ=56.17;MQ0=24;MQRankSum=-1.369;QD=10.08;ReadPosRankSum=0.714;VQSLOD=3.5745;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:40:45.07:0,45,617	1/1:8,1:7:8.73:68,9,0	0/0:23,0:18:26.09:0,26,624	0/0:25,0:20:47.40:0,47,728	0/0:25,0:24:20.68:0,21,252	0/0:19,0:18:33.10:0,33,481	0/0:28,0:28:57.10:0,57,795	0/0:25,0:24:71.72:0,72,949	0/0:19,0:18:38.99:0,39,539	1/1:15,4:19:41.46:434,41,0	1/1:3,8:10:7.57:119,8,0	0/0:15,0:13:24.05:0,24,338	0/0:14,0:14:30.10:0,30,451	0/0:11,0:11:21.04:0,21,275	0/0:14,0:13:21.04:0,21,275	0/0:22,0:22:14.31:0,14,348	0/0:24,0:24:39.09:0,39,523	0/0:21,0:21:33:0,33,442	0/0:9,0:4:11.94:0,12,93	0/1:10,0:10:5.61:6,0,75	0/0:23,0:20:21.35:0,21,163	0/0:22,0:21:24.02:0,24,278	0/0:27,0:24:1.32:0,1,166	0/0:21,0:18:17.59:0,18,263	0/0:23,0:23:33.07:0,33,436	0/0:19,0:18:46.65:0,47,637	0/0:19,0:19:35.86:0,36,513	0/0:10,0:10:15.05:0,15,226
chr10	30880933	.	C	CTTT	8458.67	PASS	AB=1.000;AC=45;AF=0.804;AN=56;BaseQRankSum=7.897;DP=239;FS=21.620;HRun=0;HaplotypeScore=94.6936;InbreedingCoeff=0.5533;MQ=68.62;MQ0=9;MQRankSum=-6.728;QD=49.47;ReadPosRankSum=-2.689;VQSLOD=4.1292;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:7,0:6:40.54:253,0,41	1/1:3,0:3:9.03:216,9,0	0/0:13,0:10:24.08:0,24,427	0/0:15,0:10:21.07:0,21,391	1/1:12,0:8:15.04:303,15,0	1/1:3,0:3:6.02:148,6,0	1/1:8,0:8:24.08:574,24,0	1/1:16,0:15:42.13:884,42,0	0/0:24,0:24:72.25:0,72,1309	1/1:4,0:4:9:167,9,0	1/1:4,0:4:9.03:187,9,0	1/1:3,1:4:12.04:261,12,0	1/1:8,0:8:21.06:454,21,0	1/1:4,0:4:9.03:221,9,0	0/0:16,0:16:48.12:0,48,856	0/1:8,0:8:37.86:350,0,38	1/1:9,1:9:21.07:515,21,0	0/1:6,0:5:43.77:186,0,44	1/1:7,0:7:18.04:380,18,0	1/1:11,0:11:30.10:618,30,0	1/1:11,2:14:27.05:555,27,0	1/1:5,0:5:8.99:132,9,0	1/1:5,0:5:15.05:338,15,0	1/1:11,0:8:24.08:550,24,0	1/1:8,0:8:24.08:552,24,0	1/1:7,0:6:15.03:273,15,0	1/1:4,0:4:9.03:198,9,0	1/1:2,0:2:6.02:144,6,0
chr10	30881176	.	ACGAAT	A	6917.04	PASS	AB=0.967;AC=50;AF=0.926;AN=54;BaseQRankSum=3.016;DP=273;FS=3.743;HRun=0;HaplotypeScore=394.0519;InbreedingCoeff=0.1968;MQ=32.42;MQ0=0;MQRankSum=0.207;QD=25.43;ReadPosRankSum=-3.282;VQSLOD=2.9912;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:5,0:5:15.01:159,15,0	1/1:3,0:3:8.77:63,9,0	./.	0/0:1,0:1:3.01:0,3,35	1/1:8,1:9:20.98:241,21,0	1/1:7,2:9:27.08:353,27,0	1/1:9,0:9:24.07:340,24,0	1/1:4,0:3:5.85:45,6,0	0/1:24,1:25:99:301,0,133	1/1:18,0:18:40.30:360,40,0	1/1:6,0:6:5.37:90,5,0	1/1:15,2:17:51.12:677,51,0	1/1:10,6:16:47.81:587,48,0	1/1:10,1:11:33.03:415,33,0	0/1:35,0:36:99:240,0,193	1/1:10,1:11:33.10:449,33,0	1/1:5,2:7:11.33:183,11,0	1/1:2,0:2:6.02:83,6,0	1/1:10,1:11:32.42:262,32,0	1/1:12,0:12:29.06:226,29,0	1/1:10,0:10:20.66:134,21,0	1/1:5,0:5:7.27:86,7,0	1/1:5,3:8:21.03:274,21,0	1/1:5,1:6:7.69:84,8,0	1/1:7,1:8:21.06:271,21,0	1/1:6,0:6:17.79:225,18,0	1/1:12,2:13:42.13:607,42,0	1/1:2,2:4:12.04:162,12,0
chr10	30881180	.	AT	A	5648.06	PASS	AB=0.667;AC=51;AF=0.944;AN=54;BaseQRankSum=2.181;DP=257;FS=0.000;HRun=1;HaplotypeScore=367.4475;InbreedingCoeff=0.3257;MQ=32.62;MQ0=0;MQRankSum=-1.676;QD=22.06;ReadPosRankSum=0.304;VQSLOD=3.0356;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,5:5:15.03:159,15,0	1/1:0,3:3:8.98:89,9,0	./.	0/0:1,0:1:3:0,3,25	1/1:1,7:8:20.90:193,21,0	1/1:2,7:9:26.87:261,27,0	1/1:0,9:9:24.07:267,24,0	1/1:0,4:3:5.91:46,6,0	1/1:1,24:25:59.19:277,59,0	1/1:1,15:16:48.11:555,48,0	1/1:0,4:4:9.02:97,9,0	1/1:2,15:17:50.95:507,51,0	1/1:6,10:16:47.44:427,47,0	1/1:1,10:11:33.03:340,33,0	1/1:2,32:34:76.21:318,76,0	1/1:1,10:11:33.07:354,33,0	0/1:3,3:6:5.99:109,0,6	1/1:0,2:2:6.02:67,6,0	1/1:1,5:6:17.50:105,17,0	1/1:0,11:11:22.50:130,22,0	1/1:0,8:8:9.95:53,10,0	1/1:0,5:5:7.26:73,7,0	1/1:3,5:8:20.72:178,21,0	1/1:2,4:6:10.21:78,10,0	1/1:1,7:8:21.05:227,21,0	1/1:0,6:6:18.05:204,18,0	1/1:2,12:14:41.84:437,42,0	1/1:2,2:4:11.89:98,12,0
chr10	30881185	.	GGGAAAT	G	8067.50	PASS	AB=0.737;AC=43;AF=0.796;AN=54;BaseQRankSum=4.896;DP=250;FS=1.891;HRun=0;HaplotypeScore=379.7528;InbreedingCoeff=0.1308;MQ=32.80;MQ0=0;MQRankSum=1.000;QD=37.52;ReadPosRankSum=2.292;VQSLOD=3.6911;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,1:5:12.04:197,12,0	0/1:2,1:3:13.33:78,0,13	./.	0/0:1,0:1:3:0,3,29	1/1:3,5:8:21.07:346,21,0	1/1:4,5:9:27.09:501,27,0	1/1:4,5:9:24.08:476,24,0	1/1:1,0:1:3.01:32,3,0	0/1:15,0:25:92.04:92,0,445	0/1:15,1:16:99:246,0,163	1/1:3,1:4:6.49:102,6,0	1/1:8,9:17:51.17:961,51,0	1/1:9,7:16:48.13:849,48,0	1/1:6,5:11:33.11:589,33,0	0/0:22,0:34:38.76:0,39,704	1/1:5,6:11:33.11:646,33,0	1/1:3,2:5:15.05:250,15,0	1/1:1,1:2:6.02:123,6,0	0/1:3,0:6:12.62:50,0,13	0/1:3,0:10:36.32:50,0,36	0/1:4,0:6:2.70:14,0,3	1/1:1,4:5:9.03:173,9,0	1/1:2,6:8:21.07:386,21,0	1/1:4,2:6:10.85:141,11,0	1/1:4,4:8:21.07:381,21,0	0/1:4,2:6:2.94:280,0,3	1/1:3,11:14:42.14:875,42,0	1/1:2,2:4:12.04:231,12,0
chr10	30881188	.	A	AG	4478.36	PASS	AC=52;AF=0.963;AN=54;BaseQRankSum=-5.404;DP=245;FS=7.286;HRun=3;HaplotypeScore=372.5511;InbreedingCoeff=0.3257;MQ=32.87;MQ0=0;MQRankSum=-2.429;QD=18.35;ReadPosRankSum=-5.291;VQSLOD=0.6957;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:5,0:5:11.95:124,12,0	1/1:3,0:3:8.96:76,9,0	./.	0/0:1,0:1:2.04:0,2,6	1/1:8,0:8:13.73:162,14,0	1/1:9,0:9:24.12:180,24,0	1/1:9,0:9:23.69:225,24,0	1/1:1,0:1:0.89:2,1,0	1/1:10,15:25:69.49:377,69,0	1/1:13,0:13:38.30:278,38,0	1/1:4,0:4:8.31:40,8,0	1/1:17,0:17:43.79:405,44,0	1/1:16,0:16:17.54:271,18,0	1/1:11,0:11:25.99:281,26,0	1/1:13,20:33:88.57:479,89,0	1/1:11,0:11:26.89:259,27,0	1/1:5,0:5:7.25:92,7,0	1/1:2,0:2:5.65:28,6,0	1/1:3,3:6:17.84:128,18,0	1/1:7,3:10:24.51:170,25,0	1/1:3,3:6:8.65:62,9,0	1/1:5,0:5:8.96:78,9,0	1/1:8,0:8:1.13:94,1,0	1/1:5,0:5:8.96:81,9,0	1/1:8,0:8:20.52:165,21,0	1/1:6,0:6:17.63:136,18,0	1/1:14,0:13:32.53:237,33,0	1/1:4,0:4:2.19:50,2,0
chr10	30881189	.	A	AGG	5554.54	PASS	AC=42;AF=0.778;AN=54;BaseQRankSum=2.480;DP=231;FS=1.745;HRun=0;HaplotypeScore=353.9877;InbreedingCoeff=0.8078;MQ=33.09;MQ0=0;MQRankSum=-0.967;QD=36.79;ReadPosRankSum=2.642;VQSLOD=3.6223;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:4:12.04:171,12,0	1/1:1,1:2:6.02:111,6,0	./.	0/0:1,0:1:2.99:0,3,23	1/1:7,1:8:20.28:287,20,0	1/1:8,1:9:26.96:327,27,0	1/1:7,2:9:24.08:362,24,0	1/1:1,0:1:2.88:15,3,0	0/0:25,0:25:61.54:0,62,631	1/1:3,2:5:15.04:216,15,0	1/1:2,0:2:5.99:49,6,0	1/1:14,3:17:50.89:693,51,0	1/1:14,2:16:46.04:518,46,0	1/1:10,1:11:32.83:465,33,0	0/0:32,0:33:92.91:0,93,846	1/1:9,2:11:32.69:431,33,0	1/1:5,0:5:14.08:200,14,0	1/1:2,0:2:6.01:61,6,0	0/0:6,0:6:16.68:0,17,122	0/0:10,0:10:25.97:0,26,202	0/0:5,0:5:8.68:0,9,66	1/1:4,1:5:9.03:151,9,0	1/1:7,1:8:20.42:233,20,0	1/1:5,0:5:9.03:168,9,0	1/1:7,1:8:21.07:300,21,0	1/1:5,0:5:15.05:207,15,0	1/1:14,0:13:41.59:465,42,0	1/1:2,2:4:11.14:122,11,0
chr10	30881206	.	TG	T	7172.18	PASS	AC=52;AF=1.000;AN=52;DP=225;FS=0.000;HRun=2;HaplotypeScore=337.0339;InbreedingCoeff=-0.0269;MQ=33.20;MQ0=0;QD=32.02;VQSLOD=3.2292;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,4:4:12.04:139,12,0	1/1:0,2:2:6.02:70,6,0	./.	./.	1/1:0,8:8:21.06:249,21,0	1/1:0,9:9:27.08:322,27,0	1/1:0,9:9:24.07:279,24,0	1/1:0,1:1:2.97:20,3,0	1/1:3,21:24:63.58:726,64,0	1/1:0,5:5:15.05:183,15,0	1/1:0,2:2:3.01:36,3,0	1/1:0,17:17:51.16:609,51,0	1/1:0,16:16:48.15:577,48,0	1/1:0,11:11:33.10:394,33,0	1/1:3,25:28:69.21:821,69,0	1/1:0,11:11:33.10:395,33,0	1/1:0,5:5:15.04:175,15,0	1/1:0,2:2:6.02:70,6,0	1/1:0,6:6:18.06:217,18,0	1/1:1,9:10:24.07:287,24,0	1/1:2,3:5:6.02:70,6,0	1/1:0,5:5:9.03:110,9,0	1/1:0,8:8:21.07:254,21,0	1/1:0,5:5:9.03:106,9,0	1/1:0,8:8:21.06:249,21,0	1/1:0,5:5:15.05:180,15,0	1/1:0,14:14:42.13:498,42,0	1/1:0,4:4:12.03:138,12,0
chr10	30881210	.	GC	G	3491.24	PASS	AC=52;AF=1.000;AN=52;BaseQRankSum=0.572;DP=217;FS=0.000;HRun=1;HaplotypeScore=354.7683;InbreedingCoeff=0.1658;MQ=28.60;MQ0=0;MQRankSum=0.725;QD=16.09;ReadPosRankSum=1.630;VQSLOD=2.3330;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,4:4:11.81:75,12,0	1/1:0,2:2:5.83:34,6,0	./.	./.	1/1:0,8:8:20.65:130,21,0	1/1:0,9:9:26.28:155,26,0	1/1:0,9:9:23.41:140,23,0	1/1:0,1:1:1.25:3,1,0	1/1:0,22:22:49.29:345,49,0	1/1:0,5:5:14.53:81,15,0	1/1:0,2:2:2.94:18,3,0	1/1:0,17:17:49.77:299,50,0	1/1:0,16:16:46.86:282,47,0	1/1:0,11:11:32.31:196,32,0	1/1:0,25:25:67.61:414,68,0	1/1:1,10:11:30.84:180,31,0	1/1:0,5:5:14.60:85,15,0	1/1:0,2:2:5.85:34,6,0	1/1:0,6:6:17.55:100,18,0	1/1:0,9:9:23.25:135,23,0	1/1:0,3:3:5.90:37,6,0	1/1:0,5:5:8.75:51,9,0	1/1:1,8:9:20.50:122,21,0	1/1:0,5:5:8.88:57,9,0	1/1:0,8:8:20.56:126,21,0	1/1:0,5:5:14.62:84,15,0	1/1:1,13:13:40.59:239,41,0	1/1:0,4:4:11.73:69,12,0
chr10	30881213	.	A	AG	5059.75	PASS	AC=52;AF=1.000;AN=52;BaseQRankSum=-1.807;DP=378;FS=3.680;HRun=1;HaplotypeScore=513.8349;InbreedingCoeff=-0.0045;MQ=28.72;MQ0=0;MQRankSum=1.755;QD=13.39;ReadPosRankSum=-0.669;VQSLOD=1.5124;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,4:15:31.18:154,31,0	1/1:0,2:2:5.64:27,6,0	./.	./.	1/1:3,8:11:24.68:109,25,0	1/1:6,9:15:39.70:229,40,0	1/1:7,9:16:39.40:209,39,0	1/1:18,1:19:49.87:327,50,0	1/1:10,22:32:82.52:442,83,0	1/1:9,5:14:38.41:250,38,0	1/1:5,2:7:8.14:35,8,0	1/1:8,17:25:64.72:362,65,0	1/1:8,16:24:66.60:340,67,0	1/1:6,11:17:45.55:267,46,0	1/1:11,25:36:83.95:401,84,0	1/1:11,10:21:56.36:284,56,0	1/1:7,5:12:22.63:118,23,0	1/1:5,2:7:17.69:114,18,0	1/1:2,6:8:23.62:151,24,0	1/1:5,9:14:36.44:220,36,0	1/1:5,3:8:17.03:112,17,0	1/1:3,5:8:13.93:64,14,0	1/1:3,8:11:25.04:142,25,0	1/1:5,5:10:13.87:63,14,0	1/1:8,8:15:33.95:179,34,0	1/1:2,5:7:20.54:124,21,0	1/1:6,13:18:49.84:264,50,0	1/1:0,4:4:11.75:71,12,0
chr10	30881488	.	ACGCGCGCGCGCGCGCGCGCGCG	A	5667.63	PASS	AB=0.708;AC=33;AF=0.717;AN=46;BaseQRankSum=0.955;DP=365;FS=17.801;HRun=0;HaplotypeScore=200.3713;InbreedingCoeff=0.3985;MQ=59.18;MQ0=5;MQRankSum=-2.935;QD=18.71;ReadPosRankSum=3.528;VQSLOD=2.5986;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:26:6.47:193,6,0	1/1:5,0:7:3.01:95,3,0	0/1:10,0:6:0:0,0,0	0/0:13,0:10:6.60:0,7,225	0/1:12,5:19:0:0,0,0	0/1:5,1:10:0:0,0,0	1/1:13,0:15:8.80:103,9,0	1/1:8,2:10:6.02:227,6,0	0/0:10,0:16:15.04:0,15,338	1/1:10,2:20:32.36:1349,32,0	./.	1/1:9,2:13:6.01:93,6,0	1/1:4,8:16:6.02:199,6,0	1/1:11,2:17:7.64:421,8,0	0/0:2,0:3:2.94:0,3,58	1/1:5,5:14:12:313,12,0	1/1:8,2:11:12.04:434,12,0	1/1:2,0:9:15.05:459,15,0	0/1:4,0:9:44.52:288,0,45	./.	0/1:25,0:37:18.97:94,0,19	0/1:3,4:8:0:0,0,0	./.	0/1:5,16:23:0:0,0,0	./.	1/1:5,2:14:30.09:1062,30,0	1/1:2,5:10:9.03:337,9,0	./.
chr10	30882245	.	GGA	G	4851.45	PASS	AB=0.542;AC=33;AF=0.611;AN=54;BaseQRankSum=7.765;DP=270;FS=10.751;HRun=0;HaplotypeScore=36.7774;InbreedingCoeff=0.8620;MQ=73.72;MQ0=2;MQRankSum=-4.604;QD=31.50;ReadPosRankSum=2.874;VQSLOD=6.0067;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,11:12:30.10:440,30,0	0/0:7,0:7:21.06:0,21,336	0/0:13,0:11:26.97:0,27,333	0/0:13,0:13:21.45:0,21,320	1/1:2,11:12:30.09:421,30,0	1/1:2,8:10:15.05:225,15,0	1/1:0,5:5:9.03:135,9,0	1/1:4,10:14:30.02:378,30,0	0/0:15,0:15:45.14:0,45,751	0/0:11,0:11:30.09:0,30,509	0/0:8,0:8:21.07:0,21,347	1/1:2,2:4:9:109,9,0	1/1:0,6:6:15.05:224,15,0	1/1:0,4:4:12.04:180,12,0	0/0:15,0:15:42.14:0,42,731	1/1:0,8:8:18.06:271,18,0	1/1:0,9:9:12.04:181,12,0	1/1:0,3:3:6.02:87,6,0	0/0:14,0:14:36.09:0,36,575	0/0:7,0:7:18.06:0,18,319	0/0:13,0:13:36.12:0,36,608	1/1:2,7:9:18.06:270,18,0	1/1:0,10:10:27.04:369,27,0	1/1:0,7:7:9.03:136,9,0	1/1:2,14:16:42.14:632,42,0	0/1:2,11:13:71.32:386,0,71	1/1:0,10:10:27.09:407,27,0	./.
chr10	30882246	.	GA	G	1740.12	PASS	AB=1.000;AC=33;AF=0.611;AN=54;BaseQRankSum=10.506;DP=259;FS=9.229;HRun=1;HaplotypeScore=41.6983;InbreedingCoeff=0.8588;MQ=70.83;MQ0=2;MQRankSum=-5.319;QD=11.84;ReadPosRankSum=3.201;VQSLOD=1.3413;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,0:11:29.06:167,29,0	0/0:7,0:7:21.05:0,21,264	0/0:11,0:9:26.99:0,27,290	0/0:12,0:12:20.67:0,21,258	1/1:13,0:12:28.90:175,29,0	1/1:8,0:8:14.67:87,15,0	1/1:5,0:5:8.83:53,9,0	1/1:10,2:12:29.57:195,30,0	0/0:15,0:15:45.13:0,45,611	0/0:11,0:11:30.09:0,30,408	0/0:8,0:8:21.07:0,21,288	1/1:3,0:3:8.69:48,9,0	1/1:6,0:6:14.64:87,15,0	1/1:4,0:4:11.77:71,12,0	0/0:15,0:15:42.13:0,42,589	1/1:8,0:8:17.65:106,18,0	1/1:9,0:9:11.77:71,12,0	1/1:3,0:3:5.82:32,6,0	0/0:13,0:13:36.09:0,36,464	0/0:7,0:7:18.06:0,18,252	0/0:13,0:13:36.11:0,36,486	1/1:8,1:9:17.65:107,18,0	1/1:10,0:10:26.06:150,26,0	1/1:7,0:7:8.83:53,9,0	1/1:14,1:15:41.19:249,41,0	0/1:13,0:13:49.94:140,0,50	1/1:10,0:10:26.49:161,26,0	./.
chr10	30882431	.	T	TC	3981.01	PASS	AB=0.871;AC=53;AF=0.946;AN=56;BaseQRankSum=8.382;DP=274;FS=86.783;HRun=0;HaplotypeScore=133.3169;InbreedingCoeff=0.5214;MQ=85.67;MQ0=0;MQRankSum=-9.417;QD=17.23;ReadPosRankSum=1.940;VQSLOD=0.1749;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,11:13:29.54:192,30,0	1/1:0,5:5:14.84:100,15,0	0/1:23,4:24:86.93:87,0,403	0/0:42,0:30:47.47:0,47,710	1/1:2,7:9:23.16:139,23,0	1/1:1,4:5:14.91:130,15,0	1/1:4,7:11:32.63:283,33,0	1/1:3,4:7:20.92:186,21,0	1/1:1,7:8:20.83:171,21,0	1/1:0,8:8:23.92:189,24,0	1/1:1,5:6:11.68:67,12,0	1/1:1,8:9:20.84:148,21,0	1/1:0,7:7:20.12:124,20,0	1/1:2,6:8:20.65:132,21,0	1/1:0,7:7:20.65:130,21,0	1/1:0,2:2:5.93:40,6,0	1/1:2,3:5:11.79:100,12,0	1/1:3,3:6:11.95:92,12,0	1/1:2,4:6:15:137,15,0	1/1:2,11:13:38.44:274,38,0	1/1:2,8:10:20.70:133,21,0	1/1:1,7:8:23.31:144,23,0	1/1:1,13:14:31.91:225,32,0	1/1:1,7:8:20.76:184,21,0	1/1:0,9:9:26.63:173,27,0	1/1:2,7:9:23.32:162,23,0	1/1:0,6:6:17.88:135,18,0	1/1:1,4:5:14.86:103,15,0
chr10	30882451	.	CCACACACACACA	C	744.83	PASS	AB=0.868;AC=20;AF=0.556;AN=36;BaseQRankSum=3.436;DP=314;FS=9.824;HRun=0;HaplotypeScore=153.4961;InbreedingCoeff=0.3900;MQ=55.84;MQ0=22;MQRankSum=-3.701;QD=5.91;ReadPosRankSum=2.530;VQSLOD=1.8574;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,3:15:3.01:98,3,0	./.	0/1:34,0:19:0:0,0,0	0/0:43,0:22:3.01:0,3,39	0/0:9,0:6:0:0,0,0	1/1:8,0:7:1.25:3,1,0	0/1:9,4:14:81.97:199,0,82	0/0:11,0:9:0:0,0,0	0/0:11,0:10:6.02:0,6,216	./.	./.	./.	1/1:4,1:6:6.02:148,6,0	1/1:7,2:8:3.01:98,3,0	0/0:8,0:7:6.02:0,6,349	./.	./.	1/1:7,0:6:3:28,3,0	0/0:6,0:6:15.05:0,15,407	./.	0/0:18,0:18:18.06:0,18,555	./.	./.	./.	1/1:12,0:12:3.01:60,3,0	1/1:10,0:10:6.02:103,6,0	1/1:5,1:6:3.01:103,3,0	1/1:5,0:5:5.06:21,5,0
chr10	30882472	.	CA	C	98.15	PASS	AB=0.766;AC=5;AF=0.093;AN=54;BaseQRankSum=2.151;DP=376;FS=7.012;HRun=1;HaplotypeScore=109.8709;InbreedingCoeff=0.0814;MQ=33.06;MQ0=54;MQRankSum=-1.323;QD=2.80;ReadPosRankSum=1.114;VQSLOD=-0.3629;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:10.27:0,10,117	1/1:4,1:5:3.01:39,3,0	0/0:18,0:3:9.03:0,9,114	0/0:37,0:11:33.08:0,33,402	0/0:12,0:9:9.03:0,9,114	0/0:11,0:8:9.03:0,9,113	0/0:21,0:21:22.29:0,22,253	0/0:15,0:12:36.10:0,36,443	0/0:15,0:14:12.03:0,12,141	0/1:4,5:7:58.51:109,0,59	0/1:5,3:8:29.19:46,0,29	./.	0/0:13,0:10:14.02:0,14,183	0/0:13,0:12:18.43:0,18,214	0/0:12,0:10:9.03:0,9,133	0/0:6,0:4:3.01:0,3,38	0/0:15,0:13:18.02:0,18,210	0/0:9,0:6:15.05:0,15,194	0/0:8,0:6:17.27:0,17,198	0/0:11,0:11:2.93:0,3,38	0/0:31,0:28:32.79:0,33,423	0/0:14,0:12:6.02:0,6,74	0/0:9,0:9:8.99:0,9,96	0/0:15,0:11:3.48:0,3,35	0/0:14,0:14:9.03:0,9,113	0/1:12,1:12:12.75:13,0,254	0/0:12,0:9:14.02:0,14,188	0/0:7,0:7:18.04:0,18,214
chr10	30882758	.	T	TG	22986.72	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-11.032;DP=624;FS=1.427;HRun=0;HaplotypeScore=61.0257;InbreedingCoeff=0.9988;MQ=82.62;MQ0=0;MQRankSum=-8.262;QD=42.57;ReadPosRankSum=5.001;VQSLOD=5.2319;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,26:28:72.25:1151,72,0	1/1:0,12:12:33.11:527,33,0	0/0:25,0:25:75.10:0,75,994	0/0:24,0:24:61.41:0,61,814	1/1:0,22:21:60.20:958,60,0	1/1:0,21:21:57.19:911,57,0	1/1:1,27:28:78.27:1247,78,0	1/1:0,26:26:75.24:1176,75,0	0/0:21,0:21:63.21:0,63,881	1/1:1,26:27:72.20:1118,72,0	1/1:0,21:22:60.20:957,60,0	1/1:0,19:19:54.18:863,54,0	1/1:0,16:16:45.15:719,45,0	1/1:2,25:27:72.25:1151,72,0	0/0:14,0:14:42.14:0,42,587	1/1:0,9:9:21.07:336,21,0	1/1:0,29:29:81.28:1295,81,0	1/1:0,16:16:45.15:719,45,0	1/1:2,23:25:72.23:1118,72,0	1/1:0,20:20:48.16:766,48,0	1/1:0,25:25:63.21:1007,63,0	1/1:0,29:29:72.25:1150,72,0	1/1:0,23:23:60.20:957,60,0	1/1:0,19:19:57.19:911,57,0	1/1:0,15:15:39.13:623,39,0	1/1:3,35:38:99:1601,102,0	1/1:0,27:26:66.23:1055,66,0	1/1:0,17:17:42.14:671,42,0
chr10	30883300	.	CCCA	C	584.80	PASS	AB=0.880;AC=5;AF=0.089;AN=56;BaseQRankSum=8.468;DP=527;FS=32.898;HRun=0;HaplotypeScore=78.0912;InbreedingCoeff=-0.0934;MQ=46.09;MQ0=37;MQRankSum=-7.453;QD=7.13;ReadPosRankSum=-1.482;VQSLOD=0.7846;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:43.01:0,43,739	0/0:8,0:7:15.52:0,16,229	0/0:72,0:7:16.37:0,16,286	0/0:56,0:18:16.13:0,16,465	0/0:19,0:19:31.01:0,31,672	0/0:10,0:10:23.75:0,24,379	0/0:20,1:21:30.78:0,31,819	0/0:18,0:18:44.18:0,44,669	0/0:11,0:11:33.10:0,33,579	0/0:19,0:15:28.45:0,28,430	0/0:8,0:7:11.81:0,12,102	0/1:18,0:17:6.74:7,0,398	0/0:10,0:10:23.73:0,24,346	0/1:9,0:8:6.28:6,0,205	0/0:9,0:9:20.99:0,21,349	0/0:4,0:3:9.03:0,9,159	0/0:27,0:25:36.14:0,36,914	0/0:14,0:14:24.58:0,25,459	0/1:19,3:21:81.33:232,0,81	0/1:14,8:22:99:331,0,128	0/1:8,3:10:21.19:118,0,21	0/0:12,0:12:28.38:0,28,463	0/0:19,0:19:21.61:0,22,662	0/0:17,0:15:30.04:0,30,500	0/0:14,0:14:35.77:0,36,524	0/0:16,0:8:18.06:0,18,312	0/0:20,0:19:51.70:0,52,775	0/0:21,0:17:47.74:0,48,732
chr10	30883301	.	CCA	C	524.59	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=9.249;DP=543;FS=50.144;HRun=0;HaplotypeScore=73.2030;InbreedingCoeff=0.5902;MQ=47.23;MQ0=38;MQRankSum=-6.786;QD=7.29;ReadPosRankSum=-0.640;VQSLOD=1.1723;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:42.48:0,42,442	0/0:8,0:7:15.39:0,15,145	0/0:74,0:7:17.18:0,17,140	0/0:57,0:18:5.46:0,5,223	0/0:23,0:23:16.85:0,17,343	0/0:10,0:10:23.05:0,23,209	0/0:22,0:22:31.15:0,31,460	0/0:16,1:17:2.89:0,3,327	0/0:12,0:12:35.26:0,35,367	0/0:21,0:17:30.88:0,31,245	0/0:5,2:6:8.58:0,9,45	0/0:19,0:18:0.62:0,1,198	0/0:9,0:9:20.68:0,21,211	0/0:8,0:9:3.19:0,3,111	0/0:10,0:10:20.95:0,21,217	0/0:5,0:4:11.96:0,12,98	0/0:26,0:25:31.37:0,31,498	0/0:16,0:16:16.20:0,16,238	1/1:22,0:22:17.20:258,17,0	1/1:21,1:22:7.02:272,7,0	1/1:11,0:10:10.37:119,10,0	0/0:11,1:12:28.14:0,28,250	0/0:17,0:20:36.91:0,37,406	0/0:16,0:15:25.66:0,26,280	0/0:12,2:14:9.22:0,9,268	0/1:16,0:8:8.87:9,0,161	0/0:19,2:20:19.50:0,20,426	0/0:21,0:17:36.24:0,36,339
chr10	30883692	.	ATACCCGTGATATT	A	4070.63	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.504;DP=739;FS=0.615;HRun=0;HaplotypeScore=278.8980;InbreedingCoeff=0.9967;MQ=84.23;MQ0=0;MQRankSum=-8.690;QD=81.41;ReadPosRankSum=-0.478;VQSLOD=3.0065;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,164,9910	1/1:2,8:10:18.06:690,18,0	0/0:19,0:19:51.17:0,51,2343	0/0:29,0:29:52.03:0,52,3659	0/0:12,0:12:33.11:0,33,1967	0/0:12,0:12:36.11:0,36,2004	0/0:30,0:30:90.31:0,90,5267	0/0:27,0:27:78.27:0,78,4707	0/0:28,0:28:84.29:0,84,5341	1/1:5,20:25:60.16:2211,60,0	1/1:2,13:15:33.11:1170,33,0	0/0:31,0:31:87.30:0,87,5728	0/0:21,0:21:60.21:0,60,3477	0/0:33,0:33:93.32:0,93,6102	0/0:29,0:29:87.30:0,87,5559	0/0:24,0:24:69.24:0,69,4225	0/0:30,0:30:87.28:0,87,4717	0/0:23,0:23:69.24:0,69,4047	0/0:25,0:25:66.23:0,66,3931	0/0:21,0:21:57.20:0,57,3617	0/0:57,0:57:99:0,169,10585	0/0:35,0:35:99:0,105,6504	0/0:26,0:26:63.22:0,63,3900	0/0:43,0:43:99:0,120,7086	0/0:19,0:18:48.16:0,48,2894	0/0:21,0:21:63.21:0,63,3928	0/0:26,0:26:78.27:0,78,4203	0/0:13,0:13:30.10:0,30,1595
chr10	30885295	.	TG	T	21071.66	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=6.164;DP=772;FS=5.516;HRun=3;HaplotypeScore=96.5090;InbreedingCoeff=0.9976;MQ=89.12;MQ0=0;MQRankSum=-10.612;QD=33.08;ReadPosRankSum=3.365;VQSLOD=5.1075;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,57:60:99:1881,156,0	1/1:0,12:12:30.98:373,31,0	0/0:37,0:37:99:0,99,1306	0/0:29,0:29:80.47:0,80,1072	1/1:0,21:21:60.19:744,60,0	1/1:1,22:23:63.16:764,63,0	1/1:0,27:27:81.21:987,81,0	1/1:3,29:32:87.26:1064,87,0	0/0:37,0:36:99:0,111,1572	1/1:1,27:28:78.21:926,78,0	1/1:0,24:24:69.22:855,69,0	1/1:0,19:19:47.92:577,48,0	1/1:1,28:29:74.98:910,75,0	1/1:0,26:26:72.18:874,72,0	0/0:32,0:32:93.31:0,93,1339	1/1:1,27:27:75.07:906,75,0	1/1:0,22:22:57.18:706,57,0	1/1:0,12:12:36.11:446,36,0	1/1:1,30:31:87.25:1063,87,0	1/1:0,26:26:69.12:820,69,0	1/1:0,41:41:99:1359,111,0	1/1:1,35:36:93.27:1153,93,0	1/1:0,26:26:69.15:836,69,0	1/1:0,27:27:63.20:780,63,0	1/1:1,22:23:63.20:781,63,0	1/1:1,34:35:99:1227,99,0	1/1:0,23:23:66.21:818,66,0	1/1:0,6:6:18.06:223,18,0
chr10	30885424	.	T	TATACAC	16228.92	PASS	AB=0.602;AC=23;AF=0.411;AN=56;BaseQRankSum=11.760;DP=790;FS=8.316;HRun=0;HaplotypeScore=196.2869;InbreedingCoeff=-0.3331;MQ=57.74;MQ0=1;MQRankSum=-14.864;QD=27.84;ReadPosRankSum=6.811;VQSLOD=3.3965;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:16,0:52:99:968,0,131	0/0:16,0:16:42.13:0,42,982	0/0:39,0:31:68.30:0,68,1131	0/0:38,0:37:84.72:0,85,1382	0/1:8,0:42:99:607,0,103	0/1:7,0:22:42.72:498,0,43	0/1:12,0:35:48.88:923,0,49	0/1:11,0:27:99:725,0,118	0/0:28,0:29:75.24:0,75,1716	0/0:27,0:27:81.20:0,81,1545	0/0:18,0:18:51.10:0,51,1074	0/1:5,0:20:62.61:624,0,63	0/1:8,1:32:5.14:1459,0,5	0/1:2,0:18:18.78:560,0,19	0/0:38,0:38:99:0,111,2384	1/1:4,0:29:13.35:1475,13,0	0/1:9,0:29:5.84:648,0,6	0/1:7,0:16:26.84:464,0,27	0/1:14,0:18:44.16:678,0,44	0/1:12,1:29:99:778,0,110	0/1:8,1:26:43.25:91,0,43	0/1:5,0:27:5.75:960,0,6	0/1:3,1:30:12.50:799,0,12	0/1:13,0:28:17.08:17,0,84	0/1:5,0:32:10.73:869,0,11	0/1:8,1:26:66.86:1230,0,67	1/1:3,0:30:25.31:1556,25,0	0/1:7,0:13:98.69:299,0,99
chr10	30886054	.	TTCCCTTCCAGTC	T	2917.80	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.782;DP=680;FS=0.681;HRun=0;HaplotypeScore=225.3296;InbreedingCoeff=0.9645;MQ=76.18;MQ0=2;MQRankSum=-6.729;QD=48.63;ReadPosRankSum=0.051;VQSLOD=3.3165;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:72.25:0,72,4033	0/0:15,0:15:36.12:0,36,2015	0/0:29,0:27:35.64:0,36,2642	0/0:32,0:23:36.26:0,36,1547	0/0:23,0:23:60.21:0,60,3283	0/0:22,0:22:66.23:0,66,3810	0/0:27,0:27:66.23:0,66,3478	0/0:28,0:28:81.26:0,81,4130	0/0:28,0:28:84.29:0,84,4855	0/0:36,0:36:84.29:0,84,4618	0/0:19,0:19:54.19:0,54,2831	0/0:31,0:31:87.30:0,87,4640	0/0:24,0:24:69.24:0,69,4079	0/0:22,0:22:60.21:0,60,3372	0/0:19,0:19:51.18:0,51,2800	0/0:25,0:25:72.23:0,72,4039	0/0:25,0:25:61.65:0,62,3771	0/0:14,0:14:36.12:0,36,2055	1/1:7,10:17:30.09:942,30,0	1/1:3,22:25:54.19:1891,54,0	1/1:9,9:18:6.49:220,6,0	0/0:28,0:28:81.26:0,81,4489	0/0:18,0:18:51.18:0,51,2600	0/0:23,0:23:60.21:0,60,3444	0/0:25,0:25:69.24:0,69,3987	0/0:20,0:20:51.18:0,51,3014	0/0:31,0:31:90.31:0,90,5125	0/0:26,0:26:66.23:0,66,3735
chr10	30886286	.	T	TGGTA	4153.40	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-11.912;DP=696;FS=0.518;HRun=0;HaplotypeScore=109.8118;InbreedingCoeff=0.9888;MQ=82.98;MQ0=0;MQRankSum=-2.087;QD=48.86;ReadPosRankSum=2.953;VQSLOD=4.2407;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,135,2484	0/0:11,0:11:30.10:0,30,552	0/0:28,0:28:72.24:0,72,1254	0/0:14,0:14:33.11:0,33,580	0/0:13,0:13:36.12:0,36,652	0/0:23,0:23:66.23:0,66,1214	0/0:37,0:37:99:0,102,1871	0/0:26,0:26:60.20:0,60,1077	0/0:23,0:23:60.19:0,60,1074	0/0:31,0:31:81.27:0,81,1454	0/0:20,0:20:57.18:0,57,1006	0/0:29,0:29:84.27:0,84,1502	0/0:19,0:19:54.18:0,54,987	0/0:23,0:23:57.20:0,57,1024	0/0:25,0:25:66.23:0,66,1214	0/0:23,0:23:69.24:0,69,1250	0/0:39,0:39:99:0,105,1882	0/0:28,0:28:78.27:0,78,1435	1/1:2,15:19:51.15:1255,51,0	1/1:4,26:30:66.18:1683,66,0	1/1:6,27:35:47.64:1215,48,0	0/0:19,0:19:48.15:0,48,853	0/0:22,0:22:66.20:0,66,1153	0/0:27,0:27:72.25:0,72,1325	0/0:26,0:26:72.23:0,72,1295	0/0:26,0:26:75.26:0,75,1376	0/0:26,0:26:78.25:0,78,1379	0/0:4,0:4:12.04:0,12,221
chr10	30886930	.	GTTT	G	4626.64	PASS	AB=0.808;AC=40;AF=0.714;AN=56;BaseQRankSum=2.146;DP=287;FS=1.311;HRun=15;HaplotypeScore=51.1970;InbreedingCoeff=0.7993;MQ=66.22;MQ0=2;MQRankSum=-3.040;QD=21.42;ReadPosRankSum=5.652;VQSLOD=3.4672;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,8:13:19.19:205,19,0	1/1:1,2:5:7.44:81,7,0	0/0:20,0:11:23.90:0,24,246	0/1:14,0:3:2.81:3,0,3	1/1:2,11:13:26.98:303,27,0	1/1:0,11:12:24:253,24,0	1/1:1,8:9:18.04:202,18,0	1/1:2,10:12:32.97:354,33,0	0/0:8,0:9:24.06:0,24,399	0/1:3,5:8:3.26:150,0,3	1/1:0,12:12:36.10:402,36,0	1/1:2,4:6:11.96:135,12,0	1/1:3,3:6:12.01:134,12,0	1/1:1,6:7:18.05:202,18,0	0/0:5,0:5:12.02:0,12,182	1/1:0,2:2:6.02:67,6,0	1/1:4,13:17:30:336,30,0	1/1:3,9:12:21.02:236,21,0	0/0:13,0:16:36.10:0,36,579	0/0:8,0:9:18.95:0,19,293	0/0:5,0:11:24.04:0,24,350	0/0:1,0:1:0:0,0,0	1/1:1,7:8:14.99:167,15,0	1/1:2,4:7:11.92:119,12,0	1/1:0,13:13:30.09:337,30,0	1/1:2,11:14:32.94:354,33,0	1/1:1,12:14:36.02:388,36,0	1/1:3,8:11:18.01:202,18,0
chr10	30887805	.	TATATTCA	T	1148.20	PASS	AC=4;AF=0.074;AN=54;BaseQRankSum=5.950;DP=239;FS=6.313;HRun=0;HaplotypeScore=53.8867;InbreedingCoeff=0.6356;MQ=68.20;MQ0=0;MQRankSum=-6.217;QD=54.68;ReadPosRankSum=-0.434;VQSLOD=2.5795;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:36.12:0,36,1112	0/0:3,0:3:9.03:0,9,355	0/0:5,0:5:12.13:0,12,123	0/0:8,0:3:0:0,0,0	0/0:12,0:12:36.11:0,36,1204	0/0:10,0:10:30.10:0,30,1146	0/0:3,0:3:6.02:0,6,186	0/0:40,0:40:99:0,117,4091	0/0:2,0:2:6.02:0,6,157	0/0:5,0:5:12.04:0,12,396	0/0:7,0:7:21.07:0,21,751	0/0:6,0:6:18.06:0,18,695	0/0:8,0:8:24.08:0,24,842	0/0:4,0:4:9.03:0,9,312	0/0:5,0:5:15.05:0,15,573	0/0:2,0:2:6.02:0,6,238	0/0:21,0:21:60.21:0,60,2242	0/0:11,0:11:33.11:0,33,1263	1/1:3,12:15:42.14:985,42,0	1/1:2,4:6:15.05:279,15,0	./.	0/0:2,0:2:3.01:0,3,63	0/0:4,0:4:12.04:0,12,432	0/0:1,0:1:3.01:0,3,39	0/0:7,0:7:21.07:0,21,811	0/0:4,0:4:12.04:0,12,476	0/0:12,0:12:33.10:0,33,1211	0/0:20,0:20:60.21:0,60,2208
chr10	30887830	.	CAT	C	397.53	PASS	AB=0.870;AC=6;AF=0.107;AN=56;BaseQRankSum=5.003;DP=248;FS=3.928;HRun=0;HaplotypeScore=32.7911;InbreedingCoeff=0.5375;MQ=62.34;MQ0=0;MQRankSum=-2.395;QD=12.82;ReadPosRankSum=-1.416;VQSLOD=2.6128;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:30.09:0,30,480	0/0:6,0:6:18.06:0,18,300	0/1:4,0:3:0:0,0,0	0/0:6,0:2:0:0,0,0	0/0:12,0:12:30.10:0,30,506	0/0:10,0:10:24.08:0,24,401	0/0:7,0:7:21.07:0,21,346	0/0:31,0:31:69.23:0,69,1137	0/0:3,0:3:6.02:0,6,98	0/0:5,0:5:15.04:0,15,229	0/0:10,0:10:27.09:0,27,442	0/0:5,0:5:12.04:0,12,202	0/0:6,0:6:15.05:0,15,245	0/0:4,0:4:9.03:0,9,152	0/0:3,0:3:6.02:0,6,101	0/0:3,0:3:9.03:0,9,152	0/0:22,0:22:54.18:0,54,906	0/0:12,0:12:30.10:0,30,502	0/1:11,6:17:13.39:281,0,13	1/1:1,4:5:9.03:116,9,0	1/1:1,4:5:9.03:115,9,0	0/0:2,0:2:6.02:0,6,98	0/0:6,0:6:12.04:0,12,199	0/0:1,0:1:3.01:0,3,42	0/0:9,0:9:24.08:0,24,400	0/0:7,0:7:18.05:0,18,273	0/0:9,0:9:21.07:0,21,354	0/0:27,0:27:72.25:0,72,1206
chr10	30888439	.	A	ATTCGT	5326.22	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-10.837;DP=783;FS=10.860;HRun=0;HaplotypeScore=147.6192;InbreedingCoeff=0.9997;MQ=81.32;MQ0=0;MQRankSum=-1.967;QD=60.53;ReadPosRankSum=-0.276;VQSLOD=5.0442;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,156,3040	0/0:15,0:15:39.13:0,39,784	0/0:20,0:20:42.13:0,42,774	0/0:21,0:21:45.12:0,45,751	0/0:29,0:29:81.28:0,81,1620	0/0:30,0:30:78.27:0,78,1571	0/0:22,0:22:51.18:0,51,1027	0/0:23,0:23:51.17:0,51,986	0/0:35,0:35:96.33:0,96,1933	0/0:30,0:30:87.30:0,87,1752	0/0:25,0:25:66.23:0,66,1329	0/0:27,0:27:75.24:0,75,1471	0/0:37,0:37:96.29:0,96,1864	0/0:34,0:34:87.30:0,87,1752	0/0:34,0:34:93.32:0,93,1873	0/0:28,0:28:72.25:0,72,1431	0/0:23,0:23:60.21:0,60,1193	0/0:11,0:11:30.10:0,30,591	1/1:8,14:23:48.16:1347,48,0	1/1:7,19:28:63.22:1851,63,0	1/1:4,30:37:75.26:2129,75,0	0/0:21,0:21:57.20:0,57,1132	0/0:29,0:29:78.24:0,78,1494	0/0:30,0:30:84.14:0,84,1505	0/0:21,0:21:57.20:0,57,1125	0/0:31,0:31:90.29:0,90,1738	0/0:50,0:47:99:0,132,2621	0/0:14,0:14:36.12:0,36,712
chr10	30889139	.	G	GTGCTGAAGAAGTCTCTGT	12707.85	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=4.544;DP=779;FS=3.612;HRun=0;HaplotypeScore=358.9344;InbreedingCoeff=0.9888;MQ=80.91;MQ0=0;MQRankSum=-11.498;QD=149.50;ReadPosRankSum=-2.663;VQSLOD=3.4697;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:62,0:62:99:0,163,7396	0/0:5,0:5:12.04:0,12,515	0/0:23,0:23:57.19:0,57,2046	0/0:19,0:19:51.17:0,51,1642	0/0:26,0:26:69.24:0,69,3088	0/0:17,0:17:36.12:0,36,1821	0/0:28,0:28:75.24:0,75,3381	0/0:26,0:26:69.22:0,69,2706	0/0:41,0:41:99:0,111,5077	0/0:34,0:34:99:0,102,4634	0/0:18,0:18:54.19:0,54,2519	0/0:36,0:36:99:0,105,4724	0/0:30,0:30:87.28:0,87,4048	0/0:25,0:25:66.22:0,66,3121	0/0:37,0:37:99:0,102,4649	0/0:35,0:35:87.30:0,87,4259	0/0:40,0:40:99:0,105,4732	0/0:23,0:23:69.19:0,69,3130	1/1:13,0:13:36.11:2187,36,0	1/1:25,12:44:99:6848,105,0	1/1:21,3:27:54.18:3673,54,0	0/0:32,0:32:75.26:0,75,3484	0/0:16,0:16:45.15:0,45,2190	0/0:29,0:29:78.24:0,78,3544	0/0:29,0:28:84.28:0,84,3888	0/0:21,0:21:60.19:0,60,2704	0/0:31,0:31:81.27:0,81,3751	0/0:11,0:11:30.10:0,30,1518
chr10	30890088	.	C	CT	4790.31	PASS	AB=1.000;AC=46;AF=0.821;AN=56;BaseQRankSum=-0.455;DP=574;FS=47.144;HRun=3;HaplotypeScore=92.4304;InbreedingCoeff=0.7533;MQ=72.62;MQ0=1;MQRankSum=2.607;QD=9.62;ReadPosRankSum=1.070;VQSLOD=0.1857;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:30:21.04:143,21,0	0/1:12,0:12:5.27:25,0,5	0/0:24,0:18:30.01:0,30,277	0/0:15,0:11:2.60:0,3,90	1/1:26,0:26:24.99:95,25,0	1/1:16,0:16:18.09:56,18,0	1/1:14,0:14:23.53:140,24,0	1/1:28,0:28:48.67:249,49,0	0/0:18,0:18:48.15:0,48,571	1/1:16,0:16:15.60:145,16,0	0/1:25,0:25:0.06:92,0,0	1/1:14,0:14:12.75:74,13,0	1/1:14,0:14:16.74:58,17,0	1/1:11,0:11:12.65:48,13,0	0/0:19,0:19:48.09:0,48,535	1/1:14,0:14:16.55:101,17,0	1/1:30,0:30:30.64:166,31,0	1/1:27,0:27:13.64:71,14,0	1/1:3,19:22:58.63:652,59,0	1/1:2,29:31:75.15:979,75,0	1/1:0,16:16:33.11:458,33,0	1/1:20,0:20:28.87:136,29,0	1/1:28,1:29:30.57:288,31,0	1/1:14,0:14:17.88:73,18,0	1/1:24,0:24:32.37:157,32,0	1/1:21,0:21:37.49:176,37,0	1/1:25,3:28:48.74:302,49,0	1/1:16,0:16:24.34:107,24,0
chr10	30890398	.	TATAC	T	5764.10	PASS	AB=0.842;AC=31;AF=0.620;AN=50;BaseQRankSum=-4.255;DP=729;FS=10.436;HRun=0;HaplotypeScore=194.3221;InbreedingCoeff=-0.2029;MQ=54.81;MQ0=13;MQRankSum=0.481;QD=9.79;ReadPosRankSum=9.054;VQSLOD=1.9944;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:34,3:35:21.03:330,0,21	1/1:7,0:7:2.98:37,3,0	./.	./.	0/1:16,8:24:17.71:293,0,18	0/1:26,7:33:49.13:540,0,49	1/1:14,15:29:30.10:468,30,0	1/1:48,2:50:17.97:232,18,0	0/0:25,0:25:54.19:0,54,1256	1/1:23,0:28:44.90:482,45,0	0/1:18,0:21:0:0,0,0	0/1:22,11:33:78.14:187,0,78	0/1:19,9:28:38.19:435,0,38	0/1:20,2:22:34.44:196,0,34	0/0:30,1:31:12.56:0,13,1249	0/1:11,7:16:28.16:225,0,28	0/1:12,0:12:51.72:52,0,58	0/1:9,3:12:18.75:116,0,19	1/1:20,0:20:15.21:108,15,0	0/1:32,0:31:0:0,0,0	./.	1/1:15,10:22:17.69:335,18,0	0/1:22,7:29:86.84:362,0,87	0/1:20,8:28:83.67:159,0,84	0/1:21,4:25:98.98:99,0,126	1/1:16,11:27:29.05:651,29,0	1/1:14,15:25:4.95:401,5,0	0/1:16,2:18:55.13:55,0,73
chr10	30890416	.	TACATACATACATACATACACATGC	T	1616.63	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=0.285;DP=778;FS=4.582;HRun=0;HaplotypeScore=450.2620;InbreedingCoeff=0.5352;MQ=50.44;MQ0=18;MQRankSum=-3.444;QD=41.45;ReadPosRankSum=0.529;VQSLOD=0.8116;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:38:90.31:0,90,4975	0/0:10,0:10:5.99:0,6,185	0/0:21,0:5:12.04:0,12,213	0/0:33,0:2:3.01:0,3,64	0/0:26,0:26:63.20:0,63,3281	0/0:38,0:38:95.86:0,96,4831	0/0:32,0:32:50.93:0,51,2008	0/0:37,0:37:99:0,102,2567	0/0:22,0:22:66.21:0,66,5114	0/0:28,0:27:45.62:0,46,1855	0/0:27,0:26:8.53:0,9,225	0/0:27,0:27:51.63:0,52,3159	0/0:30,0:30:78.74:0,79,3823	0/0:24,0:24:57.65:0,58,2947	0/0:30,0:30:81.28:0,81,5585	0/0:23,0:21:54.19:0,54,2514	0/0:13,0:13:27.98:0,28,1523	0/0:12,0:12:27.56:0,28,1212	1/1:2,16:18:45.09:1705,45,0	0/0:1,27:28:0:0,0,0	0/0:7,49:55:0:0,0,0	0/0:29,0:26:56.95:0,57,2600	0/0:34,0:34:74.74:0,75,3669	0/0:31,0:31:51.16:0,51,2642	0/0:24,0:24:48.16:0,48,3172	0/0:30,0:30:84.29:0,84,3987	0/0:30,0:25:50.83:0,51,2257	0/1:21,0:21:14.85:15,0,2640
chr10	30890422	.	CAT	C	1756.63	PASS	AB=0.981;AC=22;AF=0.407;AN=54;BaseQRankSum=-0.600;DP=765;FS=11.493;HRun=0;HaplotypeScore=224.2669;InbreedingCoeff=-0.3586;MQ=49.91;MQ0=17;MQRankSum=1.453;QD=3.31;ReadPosRankSum=-2.991;VQSLOD=1.1036;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:41,0:39:99:139,0,530	1/1:5,7:12:12.01:127,12,0	0/0:23,0:8:24.05:0,24,320	0/0:32,1:4:9.03:0,9,125	0/1:27,0:27:42.82:43,0,430	0/1:33,0:33:49.21:49,0,531	0/1:34,0:34:22.86:158,0,23	0/0:33,0:33:64.46:0,64,1018	0/0:22,0:22:63.22:0,63,1171	1/1:16,13:28:36.78:708,37,0	0/1:12,13:24:21.49:21,0,35	0/1:27,0:27:42.79:43,0,346	0/1:30,0:30:18.23:18,0,390	0/1:23,0:23:14.40:14,0,407	0/0:27,0:27:75.43:0,75,1396	0/1:24,0:22:99:142,0,252	0/1:13,0:13:16.05:16,0,200	0/1:14,0:14:12.69:13,0,182	0/1:17,0:17:56.79:57,0,202	0/1:28,0:27:0:1,0,0	./.	0/1:32,0:29:99:161,0,260	0/1:31,0:31:60.61:61,0,358	0/1:32,0:32:24.20:24,0,393	0/0:23,0:23:2.47:0,2,434	0/1:29,0:29:85.56:86,0,245	0/1:29,0:24:35.80:36,0,86	0/0:21,0:21:11.88:0,12,512
chr10	30890426	.	CAT	C	3151.44	PASS	AB=0.892;AC=25;AF=0.463;AN=54;BaseQRankSum=0.715;DP=755;FS=8.880;HRun=0;HaplotypeScore=221.2718;InbreedingCoeff=-0.4265;MQ=49.66;MQ0=16;MQRankSum=-1.015;QD=5.60;ReadPosRankSum=-4.724;VQSLOD=1.2169;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:38,4:40:99:418,0,200	1/1:10,2:12:11.75:110,12,0	0/0:23,0:8:24.08:0,24,343	0/0:35,0:6:15.05:0,15,214	0/1:22,3:25:95.83:96,0,176	0/1:30,2:32:99:270,0,237	1/1:29,5:34:1.66:308,2,0	0/0:29,1:30:3.86:0,4,506	0/0:23,0:23:69.24:0,69,1254	1/1:22,4:27:57.89:321,58,0	0/1:19,5:24:23.69:31,0,24	0/1:23,4:27:99:103,0,152	0/1:24,4:28:99:100,0,182	0/1:21,4:25:99:152,0,194	0/0:28,0:28:78.41:0,78,1418	0/1:22,1:21:99:240,0,123	0/1:11,2:13:28.73:29,0,103	0/1:10,3:13:30.95:31,0,86	0/1:17,0:17:88.72:89,0,195	0/1:28,0:27:0:1,0,0	./.	0/1:27,4:28:99:246,0,107	0/1:27,3:30:99:222,0,149	0/1:26,5:31:86.02:86,0,168	0/1:20,3:23:45.73:46,0,210	0/1:24,4:28:99:252,0,120	0/1:23,6:25:27.39:111,0,27	0/1:18,2:20:49.45:49,0,242
chr10	30890428	.	T	TAC	8228.88	PASS	AB=0.883;AC=33;AF=0.589;AN=56;BaseQRankSum=2.330;DP=756;FS=18.644;HRun=0;HaplotypeScore=206.3986;InbreedingCoeff=0.0906;MQ=49.65;MQ0=15;MQRankSum=4.815;QD=13.08;ReadPosRankSum=2.467;VQSLOD=3.3842;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:25,17:40:43.22:995,43,0	1/1:12,0:12:1.17:87,1,0	0/0:24,0:9:24.08:0,24,343	0/0:33,1:8:18.05:0,18,236	0/1:16,9:25:8.66:462,0,9	1/1:22,10:32:10.92:755,11,0	0/1:32,2:34:63.95:248,0,64	0/1:31,0:31:99:113,0,318	0/0:23,0:23:66.22:0,66,942	0/1:27,0:27:70.61:134,0,71	0/1:25,0:24:6.11:32,0,6	1/1:18,9:27:0.95:442,1,0	0/1:20,8:28:33.42:489,0,33	0/1:17,7:24:22.49:431,0,22	0/0:28,0:28:75.18:0,75,1030	0/1:19,5:22:42.15:423,0,42	1/1:6,5:11:11.39:236,11,0	1/1:11,2:13:8.52:206,9,0	0/0:17,0:17:8.21:0,8,254	0/1:28,0:27:0:1,0,0	0/1:53,0:52:0:0,0,0	1/1:23,8:28:30.91:552,31,0	0/1:22,8:30:19.98:484,0,20	1/1:23,8:31:30.40:503,30,0	1/1:11,12:23:20:547,20,0	0/1:20,8:28:3.25:553,0,3	0/1:25,4:25:51.04:135,0,51	1/1:13,7:20:18.78:400,19,0
chr10	30890430	.	CAT	C	4256.98	PASS	AB=0.935;AC=41;AF=0.759;AN=54;BaseQRankSum=8.404;DP=747;FS=15.938;HRun=0;HaplotypeScore=223.6014;InbreedingCoeff=0.5329;MQ=48.80;MQ0=13;MQRankSum=4.335;QD=7.25;ReadPosRankSum=0.530;VQSLOD=2.8967;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:40,0:38:46.04:377,46,0	1/1:7,7:14:18.01:178,18,0	0/0:24,0:10:30.10:0,30,409	0/0:33,0:8:24.08:0,24,323	1/1:24,0:24:18.46:137,18,0	1/1:32,0:32:46.63:264,47,0	1/1:34,0:34:42.41:263,42,0	0/1:31,0:31:75.81:76,0,505	0/0:23,0:23:66.23:0,66,1204	1/1:15,13:28:54.05:766,54,0	0/1:13,12:24:21.92:22,0,32	1/1:28,0:28:22.06:156,22,0	1/1:28,0:28:17.48:143,17,0	1/1:23,0:23:3.41:178,3,0	0/0:27,0:27:70.87:0,71,1297	0/1:23,0:21:2.05:233,0,2	1/1:12,0:12:9.44:61,9,0	1/1:12,1:13:11.03:88,11,0	0/1:17,0:17:80.18:80,0,90	0/1:27,0:27:0:1,0,0	./.	1/1:30,0:27:35.35:235,35,0	1/1:29,0:29:28:179,28,0	1/1:32,0:32:23.91:186,24,0	1/1:22,0:22:8.73:63,9,0	1/1:28,0:28:36.62:228,37,0	1/1:30,0:25:39.74:220,40,0	1/1:17,0:17:16.03:124,16,0
chr10	30890432	.	T	TGC	13059.38	PASS	AB=0.849;AC=38;AF=0.704;AN=54;BaseQRankSum=1.424;DP=785;FS=10.737;HRun=0;HaplotypeScore=207.7923;InbreedingCoeff=0.3052;MQ=48.10;MQ0=14;MQRankSum=1.627;QD=21.06;ReadPosRankSum=6.432;VQSLOD=3.6911;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:23,21:42:72.10:1413,72,0	1/1:12,2:14:18.06:274,18,0	0/0:25,0:10:30.10:0,30,484	0/0:37,0:8:24.08:0,24,389	1/1:12,12:24:14.62:616,15,0	0/1:19,12:31:9.54:838,0,10	0/1:29,7:36:17.93:407,0,18	0/1:43,0:43:99:705,0,297	0/0:25,0:25:72.21:0,72,1120	1/1:29,4:33:81.12:982,81,0	1/1:20,5:24:0.57:49,1,0	1/1:18,13:31:32.92:715,33,0	1/1:15,12:27:17.91:702,18,0	1/1:13,11:24:6.30:677,6,0	0/0:25,0:25:75.22:0,75,1172	0/1:21,6:25:32.03:638,0,32	0/1:7,6:13:4.49:256,0,4	1/1:9,5:14:7.91:271,8,0	0/1:17,0:17:83.02:83,0,171	0/1:27,0:27:0:1,0,0	./.	1/1:18,12:27:15.94:630,16,0	1/1:18,11:29:22.76:737,23,0	1/1:19,12:31:23.95:658,24,0	1/1:8,15:23:28.95:652,29,0	1/1:18,12:30:9.84:826,10,0	0/1:19,10:25:18.42:332,0,18	1/1:8,9:17:37.68:595,38,0
chr10	30890454	.	TGCAC	T	1409.41	PASS	AB=0.967;AC=14;AF=0.250;AN=56;BaseQRankSum=2.888;DP=812;FS=16.804;HRun=0;HaplotypeScore=253.5312;InbreedingCoeff=-0.3519;MQ=50.28;MQ0=7;MQRankSum=-0.373;QD=3.55;ReadPosRankSum=-5.659;VQSLOD=0.2182;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:48,0:47:99:141,0,1854	0/0:13,0:13:18.06:0,18,463	0/0:35,0:15:38.99:0,39,733	0/0:46,0:20:40.49:0,40,1066	0/1:24,0:24:85.98:86,0,730	0/1:29,0:29:73.23:73,0,1298	0/0:29,1:30:11.97:0,12,648	0/1:36,18:54:99:569,0,1988	0/0:26,0:26:75.26:0,75,1843	0/0:40,0:40:57.82:0,58,2032	0/1:22,0:22:36.92:37,0,214	0/0:28,1:30:2.42:0,2,1457	0/1:25,1:26:99:152,0,896	0/1:30,0:30:41.58:42,0,1110	0/0:18,0:18:51.17:0,51,1298	0/0:26,1:25:32.28:0,32,1271	0/0:16,0:16:32.89:0,33,738	0/1:15,0:15:62.68:63,0,437	0/1:18,0:18:2.95:3,0,231	0/0:32,0:32:18.02:0,18,362	0/0:56,0:56:5.87:0,6,137	0/1:22,3:24:77:77,0,684	0/1:24,2:26:86.49:86,0,835	0/1:28,0:28:4.44:4,0,1000	0/0:22,0:22:1.52:0,2,1049	0/1:32,0:32:99:178,0,1463	0/0:23,1:21:9.36:0,9,1068	0/1:20,0:20:45.73:46,0,857
chr10	30891458	.	G	GAGAA	651.82	PASS	AB=0.711;AC=1;AF=0.018;AN=56;BaseQRankSum=-3.408;DP=599;FS=2.883;HRun=0;HaplotypeScore=97.5165;InbreedingCoeff=-0.0185;MQ=85.25;MQ0=0;MQRankSum=-2.577;QD=24.14;ReadPosRankSum=0.978;VQSLOD=3.3424;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,105,1923	0/0:12,0:12:36.07:0,36,605	0/0:24,0:24:72.16:0,72,1254	0/0:17,0:17:36.12:0,36,672	0/0:22,0:22:57.19:0,57,1057	0/0:28,0:28:78.27:0,78,1453	0/0:27,0:27:81.28:0,81,1496	0/0:31,0:31:81.28:0,81,1505	0/0:14,0:14:42.14:0,42,769	0/0:22,0:22:60.21:0,60,1120	0/0:15,0:15:45.14:0,45,810	0/0:17,0:17:45.14:0,45,793	0/0:18,0:18:45.15:0,45,840	0/0:17,0:17:48.16:0,48,896	0/0:18,0:18:48.15:0,48,864	0/0:16,0:16:48.16:0,48,884	0/0:30,0:30:81.28:0,81,1499	0/0:22,0:22:54.18:0,54,1008	0/0:16,0:16:27.09:0,27,502	0/1:16,11:27:99:726,0,712	0/0:26,0:26:78.27:0,78,1455	0/0:18,0:18:51.16:0,51,907	0/0:19,0:19:48.16:0,48,877	0/0:26,0:26:72.25:0,72,1331	0/0:19,0:19:45.15:0,45,828	0/0:36,0:36:96.33:0,96,1790	0/0:14,0:13:39.13:0,39,727	0/0:6,0:6:18.05:0,18,303
chr10	30891649	.	AG	A	13599.45	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=17.096;DP=605;FS=0.000;HRun=1;HaplotypeScore=129.9260;InbreedingCoeff=0.9964;MQ=81.99;MQ0=0;MQRankSum=-6.918;QD=33.17;ReadPosRankSum=3.711;VQSLOD=4.4687;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,34:36:97.82:1203,98,0	1/1:0,8:8:21.07:263,21,0	0/0:26,0:26:77.73:0,78,1092	0/0:17,1:17:45.10:0,45,651	1/1:0,15:15:33.07:404,33,0	1/1:2,22:24:72.18:880,72,0	1/1:0,23:23:66.21:831,66,0	1/1:6,22:28:73.08:897,73,0	0/0:20,0:20:60.17:0,60,893	0/0:31,0:31:93.31:0,93,1436	0/0:12,0:12:36.12:0,36,552	1/1:0,24:24:60.19:753,60,0	1/1:0,14:14:36.12:459,36,0	1/1:4,23:27:74.64:856,75,0	0/0:29,0:29:87.27:0,87,1316	1/1:2,20:22:64.03:765,64,0	1/1:0,45:45:99:1520,120,0	1/1:1,22:23:59.53:721,60,0	0/0:21,0:21:63.20:0,63,941	0/0:12,0:12:36.11:0,36,540	0/0:26,0:26:75.24:0,75,1151	1/1:1,10:11:33.10:414,33,0	1/1:0,10:9:27.03:321,27,0	1/1:1,29:30:70.78:878,71,0	1/1:0,11:11:27.09:346,27,0	1/1:1,27:28:84.11:971,84,0	1/1:1,25:26:75.21:923,75,0	1/1:0,5:5:15.05:194,15,0
chr10	30892481	.	T	TG	8213.36	PASS	AB=0.919;AC=11;AF=0.196;AN=56;BaseQRankSum=-13.674;DP=813;FS=6.358;HRun=0;HaplotypeScore=78.4134;InbreedingCoeff=0.8736;MQ=86.11;MQ0=0;MQRankSum=-2.711;QD=38.02;ReadPosRankSum=1.490;VQSLOD=5.1306;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:61,0:61:99:0,178,2455	0/0:6,0:6:18.06:0,18,251	0/0:30,0:30:90.25:0,90,1208	0/0:22,0:22:63.17:0,63,851	0/0:30,0:30:90.28:0,90,1241	0/0:28,0:28:84.27:0,84,1156	0/0:33,0:33:99:0,99,1367	0/0:31,0:31:90.29:0,90,1244	0/0:44,0:44:99:0,132,1844	1/1:1,40:41:99:1916,120,0	1/1:0,20:20:57.19:911,57,0	0/0:36,0:36:99:0,108,1474	0/0:34,0:34:96.29:0,96,1320	0/0:30,0:30:90.24:0,90,1203	0/0:25,0:25:72.24:0,72,1007	0/0:33,0:33:99:0,99,1369	0/0:19,0:19:54.16:0,54,737	0/0:25,0:25:72.24:0,72,1007	1/1:2,25:27:81.24:1220,81,0	1/1:0,24:24:66.23:1055,66,0	1/1:0,70:70:99:3070,193,0	0/0:28,0:28:84.27:0,84,1158	0/0:18,0:18:51.17:0,51,713	0/0:23,0:23:66.22:0,66,923	0/0:15,0:15:42.14:0,42,587	0/1:31,3:34:41.61:42,0,1199	0/0:23,0:22:69.23:0,69,965	0/0:3,0:3:9.03:0,9,126
chr10	30892644	.	G	GCATAGGGTGGGGACCAAGTGA	8049.49	PASS	AB=0.964;AC=11;AF=0.196;AN=56;BaseQRankSum=2.935;DP=730;FS=0.462;HRun=0;HaplotypeScore=388.1522;InbreedingCoeff=0.8776;MQ=92.67;MQ0=0;MQRankSum=-7.495;QD=62.40;ReadPosRankSum=-4.120;VQSLOD=2.3105;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,132,5836	0/0:10,0:10:27.07:0,27,1191	0/0:37,0:37:87.16:0,87,2355	0/0:30,0:30:71.78:0,72,1725	0/0:28,0:28:75.20:0,75,3126	0/0:23,0:23:63.15:0,63,2986	0/0:39,0:39:99:0,111,4111	0/0:26,0:26:69.17:0,69,1832	0/0:29,0:29:87.27:0,87,3906	1/1:2,7:26:63.16:2250,63,0	1/1:14,0:14:18.06:540,18,0	0/0:26,0:26:75.22:0,75,3187	0/0:29,0:29:81.23:0,81,3496	0/0:18,0:18:48.15:0,48,1843	0/0:24,0:24:60.11:0,60,2606	0/0:23,0:23:66.20:0,66,3466	0/0:27,0:27:81.23:0,81,4076	0/0:26,0:26:69.15:0,69,2558	1/1:19,2:22:57.19:2400,57,0	1/1:4,3:17:12.04:709,12,0	1/1:23,0:23:57.11:1933,57,0	0/0:32,0:32:78.21:0,78,3168	0/0:19,0:19:57.15:0,57,2588	0/0:33,0:33:90.31:0,90,4355	0/0:20,0:20:57.11:0,57,2599	0/1:26,1:27:99:218,0,3452	0/0:43,0:43:99:0,117,4646	0/0:12,0:12:36.12:0,36,1420
chr10	30892946	.	AT	A	483.67	PASS	AB=1.000;AC=9;AF=0.180;AN=50;BaseQRankSum=5.380;DP=486;FS=0.000;HRun=4;HaplotypeScore=35.0242;InbreedingCoeff=0.7540;MQ=19.75;MQ0=264;MQRankSum=-1.229;QD=6.20;ReadPosRankSum=-0.269;VQSLOD=-0.3684;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:5:8.96:0,9,100	0/0:10,0:9:20.93:0,21,227	./.	./.	0/0:15,0:14:38.79:0,39,438	0/0:25,0:14:30.29:0,30,440	0/0:25,0:7:14.96:0,15,182	0/0:15,0:9:23.91:0,24,246	0/0:24,0:12:24.23:0,24,336	1/1:4,8:10:21.06:249,21,0	1/1:0,3:3:5.98:55,6,0	0/0:19,0:11:32.91:0,33,381	0/0:13,0:6:18.06:0,18,247	0/0:21,0:9:20.92:0,21,241	0/0:17,0:7:21.07:0,21,289	0/0:16,0:11:33.04:0,33,426	0/0:48,1:6:14.96:0,15,183	0/1:29,0:6:6.64:7,0,128	1/1:28,0:10:28.65:199,29,0	1/1:6,0:6:17.83:124,18,0	./.	0/0:15,0:14:23.90:0,24,331	0/0:9,0:8:17.99:0,18,218	0/0:18,0:3:3.01:0,3,41	0/0:12,0:10:15.39:0,15,281	0/0:20,0:9:15.39:0,15,282	0/0:24,0:17:36.15:0,36,476	0/0:10,0:4:6.02:0,6,78
chr10	30892949	.	TTA	T	569.56	PASS	AB=0.989;AC=7;AF=0.140;AN=50;BaseQRankSum=4.257;DP=489;FS=0.000;HRun=0;HaplotypeScore=38.0819;InbreedingCoeff=0.4717;MQ=19.81;MQ0=264;MQRankSum=0.889;QD=7.03;ReadPosRankSum=0.723;VQSLOD=2.6398;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:5:8.96:0,9,136	0/0:10,0:9:26.87:0,27,379	./.	./.	0/0:16,0:15:44.71:0,45,635	0/0:24,0:14:41.92:0,42,693	0/0:25,0:7:18.02:0,18,291	0/0:15,0:8:23.91:0,24,318	0/0:26,0:13:35.79:0,36,528	0/1:13,0:11:1.22:1,0,69	0/1:5,0:5:12.35:12,0,23	0/0:20,0:11:33.04:0,33,565	0/0:13,0:6:18.06:0,18,354	0/0:21,0:9:20.99:0,21,348	0/0:17,0:7:21.07:0,21,413	0/0:17,0:12:36.08:0,36,644	0/0:47,0:6:15.05:0,15,273	0/1:28,1:5:32.55:33,0,200	1/1:18,10:10:30.06:426,30,0	1/1:0,6:6:17.98:228,18,0	./.	0/0:16,0:15:38.82:0,39,599	0/0:9,0:8:18.06:0,18,326	0/0:18,0:3:3.01:0,3,59	0/0:11,0:9:26.95:0,27,461	0/0:20,0:9:26.91:0,27,451	0/0:24,0:17:47.80:0,48,731	0/0:9,0:3:6.02:0,6,96
chr10	30894158	.	AGT	A	1695.28	PASS	AB=0.983;AC=37;AF=0.661;AN=56;BaseQRankSum=10.348;DP=831;FS=17.128;HRun=0;HaplotypeScore=206.4328;InbreedingCoeff=-0.1125;MQ=60.05;MQ0=18;MQRankSum=-5.979;QD=2.34;ReadPosRankSum=-1.837;VQSLOD=1.3188;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:26:26.29:30,0,26	0/1:14,0:14:9.67:40,0,10	0/0:46,0:20:3.01:0,3,41	0/0:53,0:32:2.42:0,2,59	0/1:27,0:26:12.31:12,0,15	1/1:23,0:23:9.56:27,10,0	0/1:15,0:15:12.47:19,0,12	0/1:34,0:33:0.63:1,0,127	0/1:38,3:43:44.22:44,0,873	0/1:49,0:49:56.05:296,0,56	0/1:14,0:14:10.77:56,0,11	1/1:35,0:35:3.22:60,3,0	1/1:37,0:36:35.08:224,35,0	1/1:30,0:30:26.67:125,27,0	0/1:34,4:39:72.40:72,0,786	0/1:31,0:30:11.14:189,0,11	1/1:26,0:26:15.55:79,16,0	0/1:22,0:22:42.77:43,0,44	1/1:24,0:24:8.31:42,8,0	1/1:20,0:20:14.20:69,14,0	1/1:50,0:46:2.84:14,3,0	1/1:30,0:29:13.08:59,13,0	0/1:25,0:25:0.86:53,0,1	1/1:31,0:30:7.15:31,7,0	1/1:22,0:22:9.49:48,9,0	1/1:34,0:34:35.26:161,35,0	0/1:22,0:20:19.67:56,0,20	0/0:6,0:6:2.97:0,3,20
chr10	30894180	.	TGTGTGTGTGTGTGTGC	T	2396.01	PASS	AB=1.000;AC=10;AF=0.179;AN=56;BaseQRankSum=-0.166;DP=925;FS=34.387;HRun=0;HaplotypeScore=401.3712;InbreedingCoeff=0.4853;MQ=47.02;MQ0=33;MQRankSum=0.089;QD=10.51;ReadPosRankSum=-7.540;VQSLOD=-0.4459;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:28:37.90:0,38,992	0/0:10,0:10:21.04:0,21,421	0/0:64,0:12:32.78:0,33,711	0/0:63,0:27:61.02:0,61,2096	0/0:23,0:22:23.66:0,24,455	0/0:27,0:27:27.06:0,27,477	0/0:18,0:18:17.28:0,17,472	0/1:32,0:31:74.51:75,0,1390	0/0:45,0:45:99:0,123,6842	0/0:56,0:56:59.70:0,60,4922	0/0:23,0:23:20.36:0,20,772	0/0:38,0:38:38.83:0,39,1011	0/0:43,0:42:9.40:0,9,2183	0/0:33,0:33:41.63:0,42,925	0/0:40,0:40:99:0,108,6260	0/0:36,0:35:52.38:0,52,2418	0/1:26,0:24:24.79:25,0,393	0/1:27,0:27:99:225,0,1272	1/1:1,18:19:39.10:786,39,0	1/1:0,28:28:32.72:832,33,0	1/1:55,4:55:39.37:597,39,0	0/0:36,0:35:26.51:0,27,580	0/0:29,0:29:38.40:0,38,830	0/0:38,0:36:9.27:0,9,984	0/0:22,0:22:44.51:0,45,952	0/1:37,0:37:20.42:20,0,1984	0/0:16,0:14:14.15:0,14,962	0/0:5,0:5:12.04:0,12,301
chr10	30894188	.	TGTGTGTGC	T	6770.54	PASS	AB=0.971;AC=31;AF=0.554;AN=56;BaseQRankSum=7.366;DP=937;FS=9.800;HRun=0;HaplotypeScore=298.3369;InbreedingCoeff=-0.0460;MQ=48.66;MQ0=28;MQRankSum=-5.708;QD=9.63;ReadPosRankSum=2.068;VQSLOD=2.2324;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:29,3:30:6.50:284,6,0	0/1:7,1:8:9.11:145,0,9	0/0:60,0:12:26.31:0,26,237	0/0:61,0:27:56.19:0,56,925	0/1:19,0:19:17.03:17,0,50	0/1:26,0:26:5.79:26,0,6	1/1:22,0:22:9.63:88,10,0	0/1:37,0:36:78.99:607,0,79	0/0:47,0:47:99:0,122,3649	0/1:54,0:54:99:168,0,1307	0/0:24,0:24:14.98:0,15,199	0/1:35,1:36:59.04:181,0,59	0/1:38,2:39:29.85:637,0,30	0/1:30,1:31:14.50:257,0,15	0/0:42,0:42:99:0,112,3345	0/1:39,3:41:99:847,0,126	1/1:28,2:28:20.40:302,20,0	0/1:27,1:28:98.62:490,0,99	1/1:18,0:18:18.80:413,19,0	1/1:28,0:28:15.05:322,15,0	1/1:62,0:58:22.30:215,22,0	1/1:35,0:34:17.18:122,17,0	0/1:28,2:30:2.68:193,0,3	0/1:36,0:34:30.94:167,0,31	0/1:23,0:23:4.91:212,0,5	1/1:41,0:41:28.10:740,28,0	0/1:19,1:18:25.30:299,0,25	0/1:5,0:5:16.71:37,0,17
chr10	30894190	.	TGTGTGC	T	12765.85	PASS	AB=0.821;AC=41;AF=0.732;AN=56;BaseQRankSum=5.539;DP=935;FS=8.216;HRun=0;HaplotypeScore=261.2943;InbreedingCoeff=0.5317;MQ=50.22;MQ0=25;MQRankSum=-4.575;QD=18.18;ReadPosRankSum=0.351;VQSLOD=2.6766;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:29,4:31:38.85:623,39,0	0/1:3,5:8:11.37:249,0,11	0/0:58,0:13:34.10:0,34,253	0/0:64,0:33:59.25:0,59,767	0/1:4,15:19:8.90:183,0,9	1/1:2,23:25:21.07:339,21,0	1/1:2,19:21:6.99:290,7,0	1/1:35,2:36:62.08:866,62,0	0/0:46,0:46:76.64:0,77,2820	0/1:56,0:56:99:275,0,552	0/0:23,0:23:7:0,7,95	1/1:13,22:35:19.28:526,19,0	1/1:28,13:40:84.46:1524,84,0	1/1:6,24:30:29.83:568,30,0	0/0:42,0:42:99:0,112,2644	1/1:28,14:41:4.16:1583,4,0	1/1:7,23:28:23.78:385,24,0	0/1:25,2:27:4.08:638,0,4	1/1:18,0:18:33.10:387,33,0	1/1:28,0:28:15.05:252,15,0	1/1:63,0:59:23.97:221,24,0	1/1:3,31:34:18.06:396,18,0	1/1:6,23:29:16.55:460,17,0	1/1:27,11:36:34.93:389,35,0	1/1:4,19:23:39.06:639,39,0	1/1:4,36:40:99:1382,101,0	1/1:16,4:18:36.38:544,36,0	0/1:5,0:5:7.38:47,0,7
chr10	30894192	.	TGTGC	T	8758.71	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=9.774;DP=921;FS=7.841;HRun=0;HaplotypeScore=253.3687;InbreedingCoeff=0.9072;MQ=50.33;MQ0=25;MQRankSum=-3.912;QD=12.32;ReadPosRankSum=0.607;VQSLOD=2.7400;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:33,0:31:46.98:374,47,0	1/1:8,0:8:12.04:149,12,0	0/0:59,0:14:34.56:0,35,251	0/0:63,0:34:59.41:0,59,622	1/1:19,0:19:10.41:71,10,0	1/1:24,0:24:18.61:120,19,0	1/1:21,0:21:14.41:122,14,0	1/1:39,0:38:55.14:743,55,0	0/0:44,0:44:79.57:0,80,2012	1/1:53,2:55:41.67:569,42,0	1/1:24,0:24:4.35:55,4,0	1/1:32,0:32:14.50:256,14,0	1/1:39,0:38:93.87:928,94,0	1/1:27,1:28:29.12:354,29,0	0/0:44,0:44:85.23:0,85,1911	1/1:42,0:41:22.59:1046,23,0	1/1:30,0:28:23.86:247,24,0	1/1:27,0:27:26.26:469,26,0	1/1:18,0:18:38.75:355,39,0	1/1:28,0:28:15.05:183,15,0	1/1:61,0:57:26.46:213,26,0	1/1:32,0:32:18:195,18,0	1/1:28,0:28:25.40:234,25,0	1/1:37,0:35:38.84:331,39,0	1/1:23,0:23:34.18:269,34,0	1/1:38,0:38:99:960,101,0	1/1:19,1:18:47.16:458,47,0	1/1:5,0:5:8.59:59,9,0
chr10	30894193	.	GTGCGTA	G	7574.60	PASS	AB=0.995;AC=43;AF=0.768;AN=56;BaseQRankSum=10.661;DP=904;FS=56.487;HRun=0;HaplotypeScore=274.9175;InbreedingCoeff=0.4867;MQ=50.51;MQ0=24;MQRankSum=-9.643;QD=10.95;ReadPosRankSum=2.346;VQSLOD=2.3635;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:34,0:32:31.77:306,32,0	1/1:8,0:8:12.51:211,13,0	0/0:61,0:16:41.61:0,42,668	0/0:63,0:34:63.01:0,63,1346	1/1:17,1:18:11.56:131,12,0	1/1:23,1:24:20.95:254,21,0	1/1:21,0:21:17.85:218,18,0	1/1:37,0:37:31.18:202,31,0	0/0:43,0:43:88.15:0,88,3023	0/1:53,0:53:57.05:57,0,574	0/1:25,0:25:4.21:4,0,92	1/1:31,1:32:13.95:455,14,0	1/1:32,3:35:54.17:1081,54,0	1/1:28,0:28:27.52:469,28,0	0/0:45,0:45:99:0,114,2961	0/1:39,1:39:53.87:976,0,54	1/1:30,0:28:22.31:302,22,0	0/1:26,0:26:54.39:242,0,54	1/1:18,0:18:15.19:108,15,0	1/1:28,0:28:15.04:173,15,0	1/1:53,0:50:8.47:52,8,0	1/1:32,0:32:18.06:309,18,0	1/1:25,2:27:26.79:357,27,0	1/1:36,0:35:14.05:178,14,0	1/1:21,1:23:38.86:492,39,0	1/1:37,1:38:46.45:694,46,0	0/1:19,0:18:11.83:292,0,12	1/1:5,0:5:3.04:11,3,0
chr10	30894194	.	TGC	T	8466.54	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=9.615;DP=886;FS=15.010;HRun=0;HaplotypeScore=229.2487;InbreedingCoeff=0.9450;MQ=50.73;MQ0=23;MQRankSum=-1.698;QD=12.52;ReadPosRankSum=1.153;VQSLOD=2.8948;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:32,0:30:49.60:382,50,0	1/1:8,0:8:11.96:93,12,0	0/0:62,0:18:49.46:0,49,368	0/0:62,0:33:56.38:0,56,526	1/1:17,0:17:11.84:81,12,0	1/1:24,0:24:20.70:136,21,0	1/1:20,0:20:16.95:106,17,0	1/1:37,0:37:89.97:800,90,0	0/0:41,0:41:80.56:0,81,1372	1/1:6,45:51:99:1439,132,0	1/1:2,21:23:11.93:159,12,0	1/1:32,0:32:29.54:193,30,0	1/1:34,0:34:94.82:725,95,0	1/1:28,0:28:29.78:226,30,0	0/0:45,0:45:70.68:0,71,1343	1/1:40,0:39:52.28:772,52,0	1/1:29,0:28:23.18:162,23,0	1/1:23,0:23:49.53:467,50,0	1/1:18,0:18:38.90:313,39,0	1/1:28,0:28:14.94:113,15,0	1/1:52,0:50:23.92:210,24,0	1/1:32,0:32:17.86:134,18,0	1/1:27,0:27:26.69:192,27,0	1/1:35,0:34:38.79:300,39,0	1/1:22,0:23:37.22:241,37,0	1/1:38,0:38:99:809,102,0	1/1:18,0:16:47.03:356,47,0	1/1:5,0:5:8.59:59,9,0
chr10	30894692	.	A	ATG	8033.32	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-2.183;DP=952;FS=7.422;HRun=0;HaplotypeScore=128.1548;InbreedingCoeff=0.9961;MQ=60.39;MQ0=7;MQRankSum=0.336;QD=36.68;ReadPosRankSum=0.218;VQSLOD=6.3846;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:60,0:60:99:0,160,2095	0/0:10,0:10:30.10:0,30,386	0/0:35,0:18:42.12:0,42,522	0/0:45,0:28:53.13:0,53,811	0/0:21,0:21:42.14:0,42,540	0/0:21,0:20:57.19:0,57,733	0/0:33,0:33:72.22:0,72,911	0/0:29,0:29:69.22:0,69,878	0/0:37,0:37:96.31:0,96,1227	1/1:16,39:57:81.77:1900,82,0	1/1:4,17:22:44.95:758,45,0	0/0:46,0:46:99:0,126,1593	0/0:35,0:35:96.28:0,96,1206	0/0:46,0:46:99:0,126,1573	0/0:34,0:34:96.27:0,96,1192	0/0:39,0:39:99:0,105,1351	0/0:37,0:37:95.57:0,96,1218	0/0:33,0:33:81.26:0,81,1039	1/1:3,25:27:72.21:1170,72,0	1/1:3,23:26:51.17:860,51,0	1/1:25,60:85:99:3344,208,0	0/0:30,0:30:60.19:0,60,772	0/0:17,0:17:51.17:0,51,656	0/0:39,0:39:99:0,99,1238	0/0:25,0:25:66.21:0,66,849	0/0:34,0:34:87.28:0,87,1119	0/0:21,0:21:57.15:0,57,703	0/0:6,0:6:15.01:0,15,174
chr10	30894870	.	TG	T	9923.85	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=2.418;DP=629;FS=2.735;HRun=8;HaplotypeScore=72.1299;InbreedingCoeff=0.9785;MQ=75.66;MQ0=1;MQRankSum=-1.640;QD=22.50;ReadPosRankSum=5.462;VQSLOD=5.1064;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:3,34:37:96.15:926,96,0	1/1:1,9:10:26.91:238,27,0	0/0:45,0:35:66.72:0,67,663	0/0:47,0:31:43.23:0,43,480	1/1:1,19:20:50.98:471,51,0	1/1:0,15:15:39.06:376,39,0	1/1:3,13:16:33.05:319,33,0	1/1:3,14:17:41.94:386,42,0	0/0:21,0:21:63.15:0,63,723	0/0:36,0:35:90.19:0,90,1036	0/0:21,0:21:54.14:0,54,626	1/1:1,20:21:42.06:405,42,0	1/1:5,10:15:30.05:289,30,0	1/1:1,17:18:42.07:405,42,0	0/0:18,0:18:48.14:0,48,568	1/1:2,17:19:42.07:405,42,0	1/1:1,25:27:59.13:556,59,0	1/1:0,33:33:84.14:811,84,0	1/1:2,16:18:47.98:428,48,0	1/1:3,19:22:56.88:508,57,0	1/1:6,22:28:63.09:608,63,0	1/1:4,11:15:33:308,33,0	1/1:3,18:21:54.08:521,54,0	1/1:3,20:23:51.08:492,51,0	1/1:1,22:23:60.10:579,60,0	1/1:6,13:19:42.05:398,42,0	1/1:1,19:20:45.07:434,45,0	1/1:2,2:4:6.01:58,6,0
chr10	30895065	.	GTT	G	5820.71	PASS	AB=0.616;AC=41;AF=0.732;AN=56;BaseQRankSum=-3.612;DP=668;FS=2.167;HRun=15;HaplotypeScore=100.4799;InbreedingCoeff=0.7424;MQ=62.67;MQ0=24;MQRankSum=-0.418;QD=14.62;ReadPosRankSum=3.995;VQSLOD=4.3066;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:16,30:49:63.24:709,63,0	1/1:0,10:11:20.83:229,21,0	0/0:93,0:25:19.50:0,19,127	0/0:115,0:27:17.74:0,18,248	1/1:5,18:24:44.52:370,45,0	1/1:6,9:16:29.62:249,30,0	1/1:0,10:11:32.74:276,33,0	0/1:13,9:25:1.11:188,0,1	0/0:15,0:15:33.06:0,33,396	1/1:4,0:19:32.65:139,33,0	1/1:4,0:17:27.33:118,27,0	0/1:3,8:12:3.92:65,0,4	1/1:2,11:13:29.97:264,30,0	1/1:3,7:14:14.14:191,14,0	0/0:7,0:10:24.04:0,24,264	1/1:2,11:15:17.70:247,18,0	1/1:4,22:32:79.73:641,80,0	1/1:5,19:24:47.84:414,48,0	0/0:6,1:18:6.33:0,6,133	0/1:5,0:15:26.59:27,0,42	0/0:4,0:15:14.97:0,15,52	1/1:6,10:19:19.93:286,20,0	1/1:2,10:15:29.33:279,29,0	1/1:5,8:15:8.67:167,9,0	1/1:4,9:13:26.98:238,27,0	1/1:3,11:15:35.67:302,36,0	1/1:2,12:15:29.59:248,30,0	1/1:2,7:9:20.73:170,21,0
chr10	30896568	.	GT	G	4227.03	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=14.299;DP=730;FS=6.187;HRun=1;HaplotypeScore=77.0655;InbreedingCoeff=0.9999;MQ=85.40;MQ0=0;MQRankSum=-0.438;QD=38.78;ReadPosRankSum=2.294;VQSLOD=5.5746;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:57:99:0,172,2700	0/0:11,0:11:33.11:0,33,527	0/0:26,0:26:77.97:0,78,1161	0/0:19,1:20:53.85:0,54,796	0/0:25,0:25:75.26:0,75,1192	0/0:30,0:30:87.75:0,88,1369	0/0:15,0:15:45.14:0,45,691	0/0:32,0:32:96.32:0,96,1512	0/0:16,0:16:48.16:0,48,759	0/0:28,0:28:84.28:0,84,1322	0/0:20,0:20:60.20:0,60,937	0/0:25,0:25:75.26:0,75,1196	0/0:33,0:33:96.33:0,96,1533	0/0:28,0:28:81.26:0,81,1258	0/0:43,0:43:99:0,123,1941	0/0:20,0:20:60.20:0,60,952	0/0:24,0:24:69.24:0,69,1102	0/0:16,0:16:48.16:0,48,767	1/1:0,24:24:72.21:969,72,0	1/1:1,24:25:69.23:953,69,0	1/1:0,30:30:81.27:1130,81,0	0/0:28,0:28:81.18:0,81,1239	0/0:22,0:22:66.23:0,66,1052	0/0:29,0:29:87.30:0,87,1390	0/0:26,0:26:78.25:0,78,1223	0/0:30,0:30:90.30:0,90,1414	1/1:0,30:30:84.28:1174,84,0	0/0:17,0:17:51.17:0,51,812
chr10	30897860	.	TACTGCAAG	T	8254.27	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=13.292;DP=638;FS=2.425;HRun=0;HaplotypeScore=167.8624;InbreedingCoeff=0.9837;MQ=81.22;MQ0=0;MQRankSum=-14.225;QD=73.70;ReadPosRankSum=-0.830;VQSLOD=4.8586;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,120,5484	0/0:7,0:7:21.07:0,21,962	0/0:19,0:19:57.20:0,57,2380	0/0:20,0:20:57.20:0,57,2250	0/0:23,0:23:69.24:0,69,3052	0/0:18,0:18:42.14:0,42,1920	0/0:30,0:30:90.29:0,90,3744	0/0:23,0:23:69.19:0,69,3076	0/0:23,0:23:69.24:0,69,3127	0/0:16,0:16:48.16:0,48,2224	0/0:18,0:18:54.17:0,54,2317	0/0:27,0:27:81.28:0,81,3670	0/0:23,0:23:66.23:0,66,2999	0/0:25,0:25:63.22:0,63,2894	1/1:0,20:20:57.20:1724,57,0	0/0:20,0:20:57.20:0,57,2543	0/0:36,0:36:99:0,108,4955	0/0:23,0:23:69.24:0,69,3053	1/1:0,10:10:30.09:834,30,0	1/1:0,36:36:93.32:2795,93,0	1/1:0,11:11:18.06:545,18,0	0/0:29,0:29:87.24:0,87,3493	0/0:22,0:22:63.22:0,63,2831	0/0:33,0:33:88.18:0,88,3710	0/0:22,0:22:66.23:0,66,2908	0/0:25,0:25:72.25:0,72,3215	1/1:0,35:35:78.27:2357,78,0	0/0:3,0:3:9.03:0,9,417
chr10	30897943	.	CAT	C	1345.50	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=2.676;DP=627;FS=25.314;HRun=0;HaplotypeScore=210.9836;InbreedingCoeff=0.9970;MQ=68.81;MQ0=0;MQRankSum=-2.581;QD=29.90;ReadPosRankSum=-4.187;VQSLOD=1.6646;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:29.48:0,29,794	0/0:11,0:11:31.92:0,32,456	0/0:9,0:9:26.96:0,27,415	0/0:16,0:16:41.80:0,42,566	0/0:34,0:34:60.65:0,61,1200	0/0:32,0:32:62.03:0,62,1120	0/0:33,0:33:70.64:0,71,1246	0/0:25,0:25:66.17:0,66,870	0/0:19,0:19:57.20:0,57,1089	1/1:4,23:27:71.46:830,71,0	1/1:1,17:18:52.37:637,52,0	0/0:26,0:26:75:0,75,953	0/0:22,0:22:64.74:0,65,901	0/0:26,0:26:55.85:0,56,938	0/0:19,0:19:57.20:0,57,1085	0/0:20,0:20:54.17:0,54,808	0/0:23,0:23:63.17:0,63,889	0/0:13,0:13:33.11:0,33,498	0/0:12,0:12:23.21:0,23,361	0/0:31,0:31:64.46:0,64,1042	0/0:15,0:15:42.12:0,42,604	0/0:28,0:28:32.48:0,32,884	0/0:14,0:14:39.13:0,39,587	0/0:21,0:20:52.22:0,52,726	0/0:28,0:28:50.91:0,51,1010	0/0:33,1:34:59.26:0,59,1465	0/0:30,0:30:76.20:0,76,1225	0/0:16,0:16:28.27:0,28,578
chr10	30897947	.	A	AAGTC	42673.64	PASS	AB=0.950;AC=49;AF=0.875;AN=56;BaseQRankSum=-4.811;DP=662;FS=11.469;HRun=0;HaplotypeScore=121.7708;InbreedingCoeff=0.8353;MQ=66.37;MQ0=0;MQRankSum=-6.386;QD=68.94;ReadPosRankSum=0.636;VQSLOD=6.3920;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,17:25:63.17:1551,63,0	1/1:3,11:14:39.13:1054,39,0	0/0:8,0:8:21.06:0,21,363	0/0:16,0:16:39.04:0,39,631	1/1:5,28:33:90.31:2396,90,0	1/1:3,28:31:84.29:2280,84,0	1/1:1,31:33:90.31:2471,90,0	1/1:9,16:26:72.23:1886,72,0	0/1:18,1:19:26.76:27,0,1020	1/1:4,0:27:80.76:1468,81,0	1/1:6,0:23:63.20:1175,63,0	1/1:9,16:25:69.24:1792,69,0	1/1:2,19:23:66.23:1808,66,0	1/1:6,25:32:81.26:2128,81,0	0/0:19,0:19:57.20:0,57,1134	1/1:1,18:19:54.19:1497,54,0	1/1:4,18:22:60.16:1541,60,0	1/1:3,10:13:39.13:1026,39,0	1/1:2,9:11:27.09:705,27,0	1/1:11,25:36:99:2619,102,0	1/1:0,13:13:39.13:1090,39,0	1/1:15,20:35:99:2325,102,0	1/1:4,12:16:39.13:1053,39,0	1/1:4,18:21:54.18:1448,54,0	1/1:6,25:31:87.30:2303,87,0	1/1:6,32:39:99:3086,114,0	1/1:7,27:34:99:2649,99,0	1/1:3,13:17:51.15:1295,51,0
chr10	30898018	.	TAA	T	19564.08	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=5.312;DP=601;FS=0.505;HRun=5;HaplotypeScore=108.1374;InbreedingCoeff=0.9669;MQ=75.37;MQ0=1;MQRankSum=-5.422;QD=36.71;ReadPosRankSum=3.968;VQSLOD=3.8556;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,20:25:57.17:780,57,0	1/1:2,16:18:51.14:692,51,0	0/0:22,0:22:57.19:0,57,1004	0/0:8,0:8:21.07:0,21,385	1/1:2,30:32:84.28:1175,84,0	1/1:5,15:19:51.16:693,51,0	1/1:4,14:18:48.15:654,48,0	1/1:1,25:26:75.22:1009,75,0	0/0:17,1:18:6.14:0,6,749	1/1:3,21:24:63.21:877,63,0	1/1:2,18:20:42.14:587,42,0	1/1:3,17:20:51.17:714,51,0	1/1:3,17:20:51.17:713,51,0	1/1:4,19:23:57.19:797,57,0	0/0:19,0:19:54.14:0,54,928	1/1:2,9:11:27.09:378,27,0	1/1:2,18:20:51.17:713,51,0	1/1:0,19:19:54.18:755,54,0	1/1:5,8:13:30.10:419,30,0	1/1:4,29:33:93.28:1266,93,0	1/1:0,7:7:18.06:252,18,0	1/1:2,32:34:90.30:1259,90,0	1/1:2,22:24:63.21:881,63,0	1/1:1,10:11:30.10:420,30,0	1/1:2,26:28:72.24:1007,72,0	1/1:1,27:28:81.27:1133,81,0	1/1:1,39:40:99:1635,117,0	1/1:0,19:18:54.18:755,54,0
chr10	30898433	.	CTTT	C	1658.97	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=4.737;DP=540;FS=10.842;HRun=9;HaplotypeScore=105.3518;InbreedingCoeff=0.8686;MQ=79.62;MQ0=5;MQRankSum=-3.062;QD=20.74;ReadPosRankSum=3.437;VQSLOD=0.7045;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:93.32:0,93,1930	0/0:10,0:10:21.04:0,21,378	0/0:44,0:24:48.51:0,49,769	0/0:26,0:22:43.82:0,44,638	0/0:27,0:27:75.24:0,75,1519	0/0:19,0:19:54.19:0,54,1110	0/0:21,0:21:60.21:0,60,1275	0/0:20,0:20:45.15:0,45,901	0/0:17,0:18:43.64:0,44,545	0/0:25,0:24:23.33:0,23,274	0/1:18,0:17:12.90:27,0,13	0/0:23,0:28:66.17:0,66,1260	0/0:24,0:24:72.23:0,72,1455	0/0:15,0:15:45.15:0,45,949	0/0:24,0:24:63.20:0,63,1269	0/0:17,0:17:45.15:0,45,942	0/0:12,0:12:33.11:0,33,701	0/0:15,0:15:42.14:0,42,873	1/1:4,9:11:24.05:322,24,0	1/1:3,12:15:27.07:383,27,0	1/1:1,10:11:18.04:256,18,0	0/0:17,0:17:30.10:0,30,622	0/0:20,0:20:57.20:0,57,1185	0/0:16,0:16:45.15:0,45,909	0/0:8,0:8:23.75:0,24,350	0/0:12,0:12:33.11:0,33,687	1/1:2,20:23:60.19:836,60,0	0/0:7,0:7:21.07:0,21,430
chr10	30898441	.	TTGG	T	1713.47	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=3.812;DP=562;FS=1.115;HRun=0;HaplotypeScore=116.1405;InbreedingCoeff=0.7199;MQ=78.65;MQ0=5;MQRankSum=-0.826;QD=28.09;ReadPosRankSum=2.110;VQSLOD=3.8416;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,102,2014	0/0:7,0:7:19.31:0,19,376	0/0:51,0:30:40.34:0,40,714	0/0:28,0:21:43.08:0,43,629	0/0:27,0:27:79.42:0,79,1406	0/0:20,0:20:57.62:0,58,1074	0/0:23,0:23:69.21:0,69,1436	0/0:18,0:18:51.14:0,51,889	0/1:17,0:17:18.08:18,0,419	1/1:0,24:23:68.63:976,69,0	1/1:0,20:19:51.17:849,51,0	0/0:26,0:26:69.13:0,69,1301	0/0:26,0:26:78.22:0,78,1514	0/0:16,0:16:48.11:0,48,958	0/0:22,0:22:66.18:0,66,1289	0/0:15,0:15:45.15:0,45,1019	0/0:12,0:12:36.12:0,36,774	0/0:14,0:14:42.04:0,42,711	0/0:16,0:15:3.58:0,4,243	0/0:15,0:15:24.66:0,25,180	0/0:14,0:14:26.26:0,26,232	0/0:14,0:14:36.11:0,36,696	0/0:23,0:23:69.16:0,69,1268	0/0:19,0:19:57.18:0,57,1080	0/0:12,0:12:13.29:0,13,429	0/0:16,0:16:42.73:0,43,759	0/0:24,0:23:32.94:0,33,256	0/0:9,0:9:24.06:0,24,459
chr10	30898911	.	CCGG	C	671.85	PASS	AB=0.983;AC=11;AF=0.204;AN=54;BaseQRankSum=0.112;DP=410;FS=10.101;HRun=0;HaplotypeScore=77.6841;InbreedingCoeff=0.5071;MQ=68.71;MQ0=6;MQRankSum=-0.949;QD=8.29;ReadPosRankSum=1.630;VQSLOD=1.7715;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:22:28.68:0,29,239	0/1:6,0:3:4.89:5,0,33	0/0:17,0:12:23.20:0,23,238	0/1:12,0:9:10:10,0,119	0/0:20,0:18:38.25:0,38,278	0/0:18,0:17:3.24:0,3,131	0/0:23,0:21:23.69:0,24,193	0/0:7,0:6:17.68:0,18,124	0/0:17,0:16:39.01:0,39,669	1/1:3,14:14:33.11:416,33,0	1/1:5,17:18:27.08:340,27,0	0/0:19,0:19:43.34:0,43,258	0/0:23,0:23:5.47:0,5,185	0/0:19,0:18:21.56:0,22,150	0/0:14,0:14:33.07:0,33,552	0/0:13,0:13:33.15:0,33,167	0/0:20,0:18:22.20:0,22,185	0/0:16,0:14:31.14:0,31,163	1/1:2,0:2:2.90:16,3,0	./.	1/1:0,0:3:2.60:10,3,0	0/0:13,0:13:37.93:0,38,281	0/0:11,0:10:28.98:0,29,179	0/0:26,0:25:57.53:0,58,303	0/0:13,0:9:19.92:0,20,109	0/1:18,1:16:21.77:22,0,124	0/0:8,0:8:18.79:0,19,179	0/0:3,0:2:2.80:0,3,13
chr10	30898912	.	CGG	C	4439.11	PASS	AB=0.816;AC=42;AF=0.778;AN=54;BaseQRankSum=-1.399;DP=404;FS=3.291;HRun=12;HaplotypeScore=58.1902;InbreedingCoeff=0.6313;MQ=69.20;MQ0=4;MQRankSum=-0.540;QD=12.98;ReadPosRankSum=5.275;VQSLOD=2.9265;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:9,13:22:20.05:210,20,0	1/1:2,4:3:6.01:61,6,0	0/0:16,0:12:13.66:0,14,129	0/1:12,0:9:8.75:9,0,78	1/1:12,8:18:11.97:121,12,0	1/1:6,10:16:20.43:176,20,0	1/1:7,15:21:35.80:347,36,0	1/1:5,1:6:3:31,3,0	0/0:15,0:16:32.14:0,32,422	1/1:16,0:13:30.18:133,30,0	1/1:22,0:18:24.68:108,25,0	1/1:7,12:19:24.03:244,24,0	1/1:4,17:23:38.54:359,39,0	1/1:2,14:16:29.80:286,30,0	0/0:10,0:13:28.56:0,29,331	1/1:2,11:13:30.54:306,31,0	1/1:4,13:18:38.55:359,39,0	1/1:5,11:14:27.05:275,27,0	0/0:2,0:2:2.97:0,3,20	./.	1/1:4,0:3:3:29,3,0	1/1:7,6:13:1.61:163,2,0	0/1:5,7:11:1.98:162,0,2	1/1:7,19:25:54.10:549,54,0	1/1:1,12:9:18.03:183,18,0	1/1:6,11:15:32.52:298,33,0	0/0:8,0:8:12.48:0,12,174	1/1:0,3:2:3.01:31,3,0
chr10	30899138	.	A	AT	11496.35	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-8.125;DP=498;FS=1.699;HRun=8;HaplotypeScore=50.2479;InbreedingCoeff=0.9495;MQ=68.43;MQ0=1;MQRankSum=0.803;QD=27.50;ReadPosRankSum=-0.146;VQSLOD=5.2289;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,25:29:72.21:831,72,0	1/1:2,11:11:27.08:312,27,0	0/0:11,0:11:19.60:0,20,149	0/0:7,0:6:8.99:0,9,80	1/1:4,18:21:51.11:574,51,0	1/1:0,17:17:48.14:554,48,0	1/1:1,23:24:57.17:658,57,0	1/1:3,17:20:51.15:589,51,0	0/0:13,0:13:33.02:0,33,302	0/0:19,0:17:45.02:0,45,412	0/0:14,0:12:33.02:0,33,302	1/1:2,12:13:33.10:380,33,0	1/1:6,20:26:60.18:692,60,0	1/1:5,16:21:41.91:484,42,0	0/0:16,0:16:39.02:0,39,357	1/1:3,16:19:23.67:513,24,0	1/1:3,31:34:93.28:1073,93,0	1/1:2,21:23:60.18:692,60,0	1/1:3,12:13:8.66:340,9,0	1/1:1,11:12:30.09:345,30,0	1/1:0,2:2:6.02:69,6,0	1/1:2,14:16:36.11:415,36,0	1/1:2,18:20:51.09:563,51,0	1/1:4,20:24:54.16:623,54,0	1/1:0,29:26:63.15:712,63,0	1/1:2,17:18:45.13:519,45,0	1/1:5,9:14:36.02:386,36,0	1/1:0,5:5:15.04:173,15,0
chr10	30899188	.	T	TAGAAAAGAAA	3870.92	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-4.505;DP=525;FS=27.323;HRun=0;HaplotypeScore=159.1268;InbreedingCoeff=0.9425;MQ=71.80;MQ0=1;MQRankSum=-7.244;QD=69.12;ReadPosRankSum=-0.372;VQSLOD=1.8774;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:66.21:0,66,2027	0/0:5,0:5:15.05:0,15,489	0/0:29,0:23:21.31:0,21,665	0/0:30,0:21:38.59:0,39,747	0/0:28,0:27:72.14:0,72,2003	0/0:14,0:14:41.99:0,42,1015	0/0:19,0:19:39.12:0,39,1100	0/0:20,0:19:48.07:0,48,1094	0/0:13,0:13:36.11:0,36,1073	0/0:25,0:24:72.22:0,72,1875	0/0:23,0:21:57.15:0,57,1524	0/0:10,0:9:24.05:0,24,588	0/0:20,0:20:57.14:0,57,1532	0/0:18,0:18:50.97:0,51,1385	0/0:20,0:20:60.17:0,60,1670	0/0:11,0:11:33.08:0,33,907	0/0:37,0:36:99:0,102,2892	0/0:19,0:19:54.17:0,54,1617	1/1:19,5:20:51.11:1339,51,0	1/1:6,5:11:27.08:1092,27,0	1/1:0,2:2:3.01:157,3,0	0/0:19,0:19:48.10:0,48,1346	0/0:18,0:18:50.99:0,51,1348	0/0:22,0:22:60.14:0,60,1691	0/0:13,0:11:33.10:0,33,978	0/0:20,0:20:54.13:0,54,1496	1/1:3,9:17:27.08:1283,27,0	0/0:9,0:9:27.02:0,27,534
chr10	30899264	.	CAAGA	C	1258.31	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=10.717;DP=468;FS=2.374;HRun=0;HaplotypeScore=108.9370;InbreedingCoeff=0.2246;MQ=62.92;MQ0=4;MQRankSum=-9.093;QD=6.17;ReadPosRankSum=1.979;VQSLOD=2.4753;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:14.02:0,14,202	0/1:11,0:10:10.45:10,0,50	0/0:21,0:13:25.84:0,26,277	0/0:33,0:19:22.90:0,23,202	0/0:21,0:20:24.94:0,25,318	0/1:22,0:21:5.52:6,0,216	0/0:9,0:9:23.11:0,23,198	0/0:29,0:29:86.96:0,87,797	0/1:15,0:15:37.38:37,0,99	0/0:12,0:11:33.02:0,33,341	0/0:15,0:15:36.60:0,37,301	0/0:14,0:14:11.36:0,11,205	0/0:19,0:17:3.54:0,4,192	0/1:18,0:18:33.22:33,0,143	0/1:20,0:20:99:148,0,160	0/1:16,0:16:18.12:18,0,146	0/0:18,0:18:39.72:0,40,354	0/0:14,0:13:1.52:0,2,183	1/1:8,1:9:26.95:259,27,0	1/1:5,1:6:14.90:129,15,0	1/1:16,0:16:38.51:274,39,0	0/0:14,0:12:27:0,27,238	0/1:12,0:12:7.43:7,0,118	0/0:14,0:14:29.65:0,30,219	0/1:24,0:21:51.74:52,0,91	0/0:18,0:17:11.34:0,11,278	1/1:16,7:20:44.26:454,44,0	0/1:12,0:12:4.85:5,0,124
chr10	30899266	.	AGAAGGAAG	A	6383.72	PASS	AB=0.907;AC=37;AF=0.740;AN=50;BaseQRankSum=-1.379;DP=465;FS=3.312;HRun=0;HaplotypeScore=123.1237;InbreedingCoeff=0.4064;MQ=61.53;MQ0=4;MQRankSum=-3.989;QD=20.53;ReadPosRankSum=0.380;VQSLOD=4.4310;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:10,3:13:6.02:148,6,0	1/1:4,7:10:15.05:337,15,0	./.	./.	1/1:13,8:20:12.01:242,12,0	1/1:10,12:21:18.06:442,18,0	1/1:9,0:9:3.01:71,3,0	0/0:29,0:29:0:0,0,0	1/1:6,8:15:27.09:647,27,0	0/0:13,0:12:9.03:0,9,198	0/0:12,0:13:6.02:0,6,119	1/1:10,4:14:21.05:408,21,0	1/1:11,7:16:11.73:295,12,0	1/1:9,9:18:21.07:518,21,0	0/0:9,0:19:32.93:0,33,269	1/1:7,9:16:18.06:444,18,0	1/1:17,2:19:12.03:186,12,0	1/1:11,2:12:9:169,9,0	1/1:9,0:9:6.02:122,6,0	1/1:6,0:6:3.01:64,3,0	0/1:17,0:17:13.96:108,0,14	./.	1/1:6,4:11:12.04:277,12,0	0/0:10,5:15:0:0,0,0	1/1:7,18:22:33.11:813,33,0	0/1:10,7:17:35.31:389,0,35	0/1:23,0:20:41.89:354,0,42	1/1:6,6:13:15.05:349,15,0
chr10	30899319	.	GAAGA	G	1802.40	PASS	AB=1.000;AC=18;AF=0.321;AN=56;BaseQRankSum=9.944;DP=508;FS=10.716;HRun=0;HaplotypeScore=112.2264;InbreedingCoeff=0.2191;MQ=63.17;MQ0=5;MQRankSum=-9.054;QD=6.96;ReadPosRankSum=2.387;VQSLOD=1.6232;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:22:44.06:0,44,417	0/1:7,0:7:5.96:27,0,6	0/0:15,0:13:31.81:0,32,338	0/0:16,0:11:32.84:0,33,292	0/0:18,0:17:5.30:0,5,180	0/1:24,0:23:0.34:0,0,248	0/0:18,0:18:46.64:0,47,375	0/0:38,0:36:99:0,102,921	0/1:21,0:21:25.91:26,0,212	0/0:22,0:22:59.95:0,60,540	0/0:11,0:11:32.86:0,33,280	0/0:12,0:12:3.78:0,4,181	0/1:21,0:19:2.19:2,0,258	0/1:19,0:19:27.78:28,0,101	0/1:28,0:28:99:111,0,377	0/1:16,0:16:17.84:18,0,124	0/0:17,0:17:38.59:0,39,322	0/0:14,0:14:25.80:0,26,269	1/1:22,1:20:36.54:431,37,0	1/1:13,1:14:41.46:318,41,0	1/1:20,0:20:38.57:317,39,0	0/0:10,0:7:17.94:0,18,147	0/1:10,0:10:15.24:15,0,105	0/0:17,0:17:27.35:0,27,214	0/1:24,0:22:59.21:64,0,59	0/0:17,0:17:10.36:0,10,268	1/1:16,7:22:64.62:598,65,0	0/1:9,0:9:25.23:25,0,30
chr10	30899670	.	GCA	G	471.28	PASS	AB=0.721;AC=6;AF=0.107;AN=56;BaseQRankSum=6.553;DP=555;FS=15.646;HRun=0;HaplotypeScore=74.9526;InbreedingCoeff=0.6694;MQ=55.83;MQ0=10;MQRankSum=-6.549;QD=8.27;ReadPosRankSum=-1.075;VQSLOD=1.8447;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,105,2076	0/0:2,0:2:3.01:0,3,61	0/0:27,3:3:9.03:0,9,115	0/1:30,1:11:21.90:22,0,108	0/0:23,0:23:66.23:0,66,1339	0/0:21,0:21:63.22:0,63,1252	0/0:23,0:23:66.23:0,66,1315	0/0:21,0:21:60.21:0,60,1194	0/0:25,0:25:75.26:0,75,1501	0/0:25,0:25:72.25:0,72,1462	0/0:13,0:13:27.09:0,27,548	0/0:18,0:18:54.19:0,54,1084	0/0:27,0:27:81.28:0,81,1644	0/0:25,0:25:75.26:0,75,1471	0/0:18,0:18:54.17:0,54,1028	0/0:13,0:13:36.12:0,36,732	0/0:32,0:32:93.32:0,93,1862	0/0:18,0:18:54.19:0,54,1084	1/1:1,8:8:21.03:257,21,0	0/1:0,6:6:0:0,0,0	0/0:0,15:15:0.47:0,0,1	0/0:11,0:11:33.11:0,33,629	0/0:16,0:16:45.15:0,45,897	0/0:32,0:32:93.32:0,93,1884	0/0:11,0:11:27.09:0,27,547	0/0:26,0:26:78.27:0,78,1556	1/1:1,9:9:23.67:318,24,0	0/0:16,0:16:48.16:0,48,954
chr10	30899688	.	ATG	A	334.62	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.745;DP=578;FS=11.895;HRun=0;HaplotypeScore=76.9329;InbreedingCoeff=0.8399;MQ=53.67;MQ0=13;MQRankSum=-6.639;QD=19.68;ReadPosRankSum=-1.900;VQSLOD=2.8195;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:93.32:0,93,1849	0/0:4,0:4:12.04:0,12,233	0/0:42,1:4:12.04:0,12,210	0/0:32,0:8:22.26:0,22,294	0/0:25,0:25:69.24:0,69,1346	0/0:20,0:20:60.21:0,60,1167	0/0:24,0:24:72.25:0,72,1427	0/0:24,0:24:69.23:0,69,1351	0/0:20,0:20:60.21:0,60,1198	0/0:28,0:27:60.66:0,61,1430	0/0:15,0:15:27:0,27,457	0/0:19,0:19:54.19:0,54,1045	0/0:27,0:27:81.26:0,81,1547	0/0:22,0:22:66.23:0,66,1305	0/0:17,0:17:51.17:0,51,1007	0/0:15,0:15:42.14:0,42,819	0/0:36,0:36:99:0,108,2107	0/0:21,0:21:43.74:0,44,1069	1/1:3,3:5:11.76:132,12,0	0/0:6,0:6:0:0,0,0	0/0:4,7:11:0.47:0,0,1	0/0:8,0:8:24.08:0,24,463	0/0:16,0:16:45.15:0,45,879	0/0:35,0:35:96.33:0,96,1923	0/0:15,0:15:33.11:0,33,658	0/0:28,0:28:84.27:0,84,1630	1/1:3,8:10:26.06:318,26,0	0/0:16,0:16:43.16:0,43,851
chr10	30899690	.	GCACACA	G	148.11	PASS	AB=0.773;AC=6;AF=0.107;AN=56;BaseQRankSum=5.836;DP=581;FS=11.937;HRun=0;HaplotypeScore=120.1146;InbreedingCoeff=0.7902;MQ=53.51;MQ0=13;MQRankSum=-5.771;QD=3.90;ReadPosRankSum=-1.186;VQSLOD=1.0126;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:90.28:0,90,2924	0/0:3,0:3:9.03:0,9,321	0/0:43,0:4:12.04:0,12,302	0/0:33,0:8:20.70:0,21,213	0/0:26,0:26:69.17:0,69,1909	0/0:20,0:20:57.20:0,57,1916	0/0:25,0:25:72.25:0,72,2232	0/0:24,0:24:66.09:0,66,1809	0/0:20,0:20:60.15:0,60,1829	0/0:28,0:27:78.26:0,78,2305	0/0:15,0:15:20.68:0,21,562	0/0:20,0:20:54.07:0,54,1526	0/0:25,0:25:75.18:0,75,2356	0/0:22,0:22:66.20:0,66,2109	0/0:17,0:17:48.15:0,48,1534	0/0:14,0:14:42.12:0,42,1185	0/0:37,0:37:99:0,111,3422	0/0:22,0:22:9.02:0,9,1656	1/1:6,0:5:7.53:79,8,0	0/1:1,5:6:0:0,0,0	0/1:13,0:13:0.13:0,0,0	0/0:8,0:8:18.04:0,18,525	0/0:16,0:16:42.12:0,42,1301	0/0:35,0:35:93.32:0,93,3206	0/0:15,0:15:33.10:0,33,1036	0/0:26,0:26:78.26:0,78,2560	1/1:11,2:12:20.47:179,20,0	0/0:16,0:16:36.17:0,36,1283
chr10	30899709	.	C	CAT	62.10	PASS	AB=0.907;AC=6;AF=0.107;AN=56;BaseQRankSum=6.047;DP=584;FS=6.213;HRun=0;HaplotypeScore=88.7571;InbreedingCoeff=0.2777;MQ=52.96;MQ0=12;MQRankSum=-3.472;QD=0.89;ReadPosRankSum=-1.905;VQSLOD=0.6119;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:96.22:0,96,1437	0/0:4,0:4:12.04:0,12,184	0/0:27,0:6:15.52:0,16,214	0/0:30,0:12:17.96:0,18,252	0/0:20,0:20:54.16:0,54,782	0/0:21,0:21:63.21:0,63,955	0/0:24,0:24:69.23:0,69,1049	0/0:32,0:31:81.26:0,81,1201	0/0:26,0:26:66.22:0,66,1009	0/1:19,5:23:98.06:98,0,726	0/1:12,4:16:25.36:25,0,189	0/0:17,0:17:48.16:0,48,731	0/0:25,0:25:72.24:0,72,1102	0/0:25,0:25:75.24:0,75,1116	0/0:18,0:18:48.12:0,48,709	0/0:13,0:13:33.11:0,33,505	0/0:40,0:40:99:0,117,1759	0/0:20,0:20:57.19:0,57,863	0/1:11,0:10:3.07:3,0,249	1/1:6,1:7:3.01:38,3,0	0/0:20,0:20:0.89:0,1,2	0/0:5,0:5:15.05:0,15,229	0/0:12,0:12:33.09:0,33,479	0/0:38,0:38:99:0,102,1557	0/0:15,0:15:39.13:0,39,595	0/0:28,0:28:81.26:0,81,1217	0/1:12,0:12:4.13:7,0,4	0/0:20,0:20:58.94:0,59,826
chr10	30900497	.	GTAATA	G	617	PASS	AB=1.000;AC=20;AF=0.769;AN=26;BaseQRankSum=1.552;DP=255;FS=0.000;HRun=0;HaplotypeScore=58.5051;InbreedingCoeff=0.3068;MQ=80.79;MQ0=7;MQRankSum=-0.456;QD=4.71;ReadPosRankSum=1.004;VQSLOD=0.9494;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	0/0:32,0:15:0:0,0,1	1/1:5,0:7:3.01:35,3,0	./.	./.	0/1:35,0:34:0:0,0,0	0/0:4,0:4:3.01:0,3,83	1/1:4,0:7:3.01:35,3,0	./.	./.	./.	1/1:4,0:4:2.68:11,3,0	./.	./.	1/1:11,13:24:18.06:316,18,0	1/1:6,0:11:9.03:105,9,0	1/1:10,0:11:3.01:35,3,0	1/1:4,0:6:6:58,6,0	./.	./.	./.	0/1:3,0:3:0:0,0,0	./.	./.	1/1:7,0:10:6.02:70,6,0	1/1:10,0:13:3.01:35,3,0
chr10	30902101	.	GTCTT	G	4660.74	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=12.816;DP=680;FS=0.894;HRun=0;HaplotypeScore=114.2867;InbreedingCoeff=0.9910;MQ=89.12;MQ0=0;MQRankSum=-3.666;QD=45.25;ReadPosRankSum=3.812;VQSLOD=5.5813;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,126,3379	0/0:9,0:9:27.08:0,27,671	0/0:28,0:28:81.22:0,81,1958	0/0:31,0:31:75.61:0,76,1713	0/0:30,0:30:87.30:0,87,2314	0/0:21,0:21:54.10:0,54,1334	0/0:27,0:27:81.28:0,81,2146	0/0:42,0:42:99:0,123,3263	0/0:19,0:19:57.18:0,57,1477	0/0:27,0:27:81.28:0,81,2179	0/0:21,0:21:63.22:0,63,1701	0/0:18,0:18:54.19:0,54,1457	0/0:22,0:22:66.23:0,66,1743	0/0:20,0:20:60.21:0,60,1603	0/0:27,0:27:81.28:0,81,2157	0/0:17,0:17:51.18:0,51,1377	0/0:29,0:29:87.30:0,87,2313	0/0:30,0:30:84.29:0,84,2249	1/1:1,10:11:30.10:567,30,0	1/1:0,25:25:60.21:1137,60,0	1/1:0,43:43:99:1879,99,0	0/0:17,0:17:48.16:0,48,1294	0/0:21,0:21:63.22:0,63,1701	0/0:21,0:21:63.22:0,63,1701	0/0:20,0:20:60.20:0,60,1565	0/0:31,0:31:90.30:0,90,2347	1/1:1,23:24:57.16:1077,57,0	0/0:4,0:4:12.04:0,12,324
chr10	30902946	.	T	TA	5675.04	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-11.362;DP=346;FS=0.510;HRun=8;HaplotypeScore=45.8348;InbreedingCoeff=0.9108;MQ=76.48;MQ0=4;MQRankSum=0.287;QD=27.15;ReadPosRankSum=-0.242;VQSLOD=5.0890;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,10:11:30.09:346,30,0	1/1:2,2:4:6.02:69,6,0	0/0:19,0:14:14.65:0,15,106	0/0:17,0:9:1.75:0,2,79	1/1:1,16:17:48.14:554,48,0	1/1:0,7:7:18.05:208,18,0	1/1:4,1:5:6.02:69,6,0	1/1:2,26:26:78.15:839,78,0	0/0:13,0:13:33:0,33,302	0/0:11,0:11:30.01:0,30,270	0/0:12,0:12:33.01:0,33,299	1/1:1,14:15:36.11:415,36,0	1/1:4,7:11:18.05:205,18,0	1/1:2,10:12:27.04:297,27,0	0/0:12,0:12:30.02:0,30,274	1/1:5,5:10:26.63:259,27,0	1/1:1,13:14:33.10:381,33,0	1/1:0,9:9:24.07:277,24,0	0/0:19,0:18:42:0,42,384	0/0:13,0:13:29.99:0,30,275	0/0:3,0:3:6:0,6,55	1/1:1,9:10:27.08:308,27,0	1/1:3,6:9:15.04:173,15,0	1/1:0,6:6:15.04:173,15,0	1/1:1,14:15:30.09:346,30,0	1/1:1,11:12:33.10:381,33,0	0/0:18,0:18:50.98:0,51,455	1/1:2,12:14:33.09:376,33,0
chr10	30903724	.	A	ATG	7508.47	PASS	AB=0.768;AC=30;AF=0.536;AN=56;BaseQRankSum=0.353;DP=569;FS=9.348;HRun=0;HaplotypeScore=135.4201;InbreedingCoeff=0.5885;MQ=55.71;MQ0=6;MQRankSum=1.020;QD=21.09;ReadPosRankSum=2.307;VQSLOD=4.8132;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:19,17:31:54.18:860,54,0	1/1:11,3:14:15.05:240,15,0	0/0:17,0:11:15.04:0,15,176	0/0:20,0:15:12.47:0,12,245	0/1:24,3:26:4.62:176,0,5	1/1:14,8:22:30.10:481,30,0	1/1:8,9:17:27.09:431,27,0	1/1:11,17:26:48.04:692,48,0	0/0:24,0:24:60.17:0,60,724	0/0:21,0:21:42.13:0,42,517	0/0:18,0:18:33.10:0,33,407	1/1:10,12:20:39.13:636,39,0	1/1:9,3:12:3.91:221,4,0	1/1:13,4:17:21.07:326,21,0	0/0:24,0:25:41.96:0,42,493	1/1:10,7:16:33.11:522,33,0	0/1:11,8:18:3.98:395,0,4	1/1:7,5:12:21.07:324,21,0	0/0:16,0:15:29.92:0,30,333	0/0:23,0:22:48.14:0,48,576	0/0:22,0:19:30.09:0,30,369	1/1:11,7:17:27.06:366,27,0	0/1:9,7:16:45.26:315,0,45	0/1:15,5:19:14.23:250,0,14	0/1:10,6:15:9.86:320,0,10	1/1:10,19:28:26.26:865,26,0	0/0:26,0:26:44.73:0,45,496	0/1:9,3:12:13.80:88,0,14
chr10	30903734	.	GTGTGTC	G	6952.26	PASS	AB=0.816;AC=30;AF=0.536;AN=56;BaseQRankSum=1.515;DP=606;FS=7.891;HRun=0;HaplotypeScore=160.6457;InbreedingCoeff=0.5813;MQ=46.73;MQ0=26;MQRankSum=3.001;QD=18.06;ReadPosRankSum=2.661;VQSLOD=3.6881;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:34,5:32:54.12:777,54,0	1/1:11,0:11:15.05:248,15,0	0/0:14,0:8:15.03:0,15,235	0/0:15,0:10:12.48:0,12,459	0/1:8,19:25:5.01:147,0,5	1/1:14,4:18:29.91:399,30,0	1/1:22,0:21:27.09:420,27,0	0/1:38,0:31:99:534,0,115	0/0:26,0:26:60.20:0,60,1543	0/0:17,0:16:42.14:0,42,1081	0/0:18,0:17:33.07:0,33,801	1/1:25,3:26:39.11:625,39,0	1/1:11,1:11:8.79:206,9,0	1/1:15,2:15:21.01:228,21,0	0/0:26,0:25:45.14:0,45,1102	1/1:16,3:18:33.08:490,33,0	0/1:18,4:21:1.01:476,0,1	1/1:12,0:12:24:306,24,0	0/0:20,0:15:40.91:0,41,692	0/0:26,0:23:48.15:0,48,1013	0/0:35,0:27:30.09:0,30,691	1/1:20,3:19:27.06:389,27,0	0/1:13,4:16:9.42:246,0,9	1/1:18,2:19:23.17:241,23,0	1/1:12,5:15:1.81:272,2,0	0/1:29,1:25:21.36:859,0,21	0/0:24,0:23:46.87:0,47,916	0/1:7,6:12:13.80:89,0,14
chr10	30903768	.	GTC	G	789.58	PASS	AB=0.938;AC=7;AF=0.135;AN=52;BaseQRankSum=-0.019;DP=608;FS=0.000;HRun=0;HaplotypeScore=160.9856;InbreedingCoeff=0.6263;MQ=36.42;MQ0=71;MQRankSum=1.795;QD=7.74;ReadPosRankSum=1.405;VQSLOD=3.4244;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:33:35.96:0,36,569	0/0:9,0:9:6.80:0,7,159	./.	./.	0/0:22,0:17:5.60:0,6,158	0/0:16,0:16:6.04:0,6,268	0/0:36,0:32:8.08:0,8,96	0/0:39,0:22:59.90:0,60,905	0/0:24,0:21:31.57:0,32,531	0/0:26,0:20:44.27:0,44,622	0/0:21,0:19:20.11:0,20,277	0/0:27,0:24:17.91:0,18,308	0/0:19,0:15:23.94:0,24,301	0/0:11,0:9:11.96:0,12,231	0/0:26,0:22:27.09:0,27,503	0/0:20,0:17:19.42:0,19,318	0/0:25,0:24:39.51:0,40,591	0/0:11,0:11:14.84:0,15,284	0/1:14,1:9:37.92:211,0,38	1/1:23,2:18:21.02:238,21,0	1/1:38,6:32:15.01:156,15,0	0/0:25,0:18:3.01:0,3,52	0/0:23,0:21:17.99:0,18,283	0/0:22,0:20:12.76:0,13,183	0/0:19,0:16:12.42:0,12,213	0/0:36,0:27:72.02:0,72,975	1/1:12,6:17:32.51:326,33,0	0/0:5,0:2:3.01:0,3,54
chr10	30903778	.	C	CTG	770.97	PASS	AB=0.945;AC=21;AF=0.420;AN=50;BaseQRankSum=-2.066;DP=612;FS=0.000;HRun=0;HaplotypeScore=171.6595;InbreedingCoeff=0.3219;MQ=35.14;MQ0=74;MQRankSum=4.798;QD=2.24;ReadPosRankSum=0.202;VQSLOD=2.4206;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:44,0:34:3.02:11,3,0	1/1:8,0:8:2.93:21,3,0	./.	./.	0/1:22,0:17:0.27:0,0,0	0/0:16,0:16:1.66:0,2,4	0/0:36,0:32:2.84:0,3,37	0/0:36,0:19:21.06:0,21,253	1/1:20,7:24:30.08:460,30,0	0/0:26,0:20:3.17:0,3,264	1/1:17,0:17:5.16:34,5,0	0/1:25,0:22:0.79:1,0,30	0/0:18,0:14:17.18:0,17,188	./.	0/1:10,16:23:61.54:86,0,62	0/0:22,0:19:7.23:0,7,61	0/0:28,0:27:5.12:0,5,210	0/0:14,0:13:12.04:0,12,147	0/1:12,0:6:20.90:32,0,21	1/1:24,0:18:8.51:68,9,0	1/1:38,0:30:9:78,9,0	1/1:27,0:20:2.84:15,3,0	0/1:20,0:18:0:0,0,0	0/1:22,0:22:0.31:0,0,0	0/0:19,0:16:2.68:0,3,15	0/0:30,0:24:6.24:0,6,469	0/1:19,0:19:49.50:106,0,49	0/0:5,0:2:0:0,0,0
chr10	30903780	.	G	GTGTGTC	2063.39	PASS	AB=0.991;AC=33;AF=0.635;AN=52;BaseQRankSum=-4.326;DP=610;FS=7.615;HRun=0;HaplotypeScore=181.6894;InbreedingCoeff=0.0923;MQ=34.97;MQ0=73;MQRankSum=-0.421;QD=4.28;ReadPosRankSum=-2.108;VQSLOD=1.8282;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:42,1:33:20.42:164,20,0	1/1:8,0:8:10.16:92,10,0	./.	./.	1/1:21,0:16:2.96:24,3,0	0/1:18,0:18:7.55:53,0,8	0/1:36,0:32:0.06:1,0,0	1/1:31,0:15:25.63:156,26,0	0/0:27,0:24:36.28:0,36,193	0/1:26,0:20:51.27:410,0,51	1/1:18,0:17:14.91:259,15,0	0/1:25,0:22:14:96,0,14	0/1:17,0:13:16.32:16,0,21	1/1:14,0:11:3:25,3,0	0/0:29,0:25:16.75:0,17,184	0/1:22,0:19:4.66:83,0,5	0/1:28,1:28:24.58:184,0,25	0/1:13,1:13:12.57:43,0,13	0/1:13,0:6:27.19:29,0,27	0/0:25,0:18:14.98:0,15,125	0/0:47,0:33:12.31:0,12,115	1/1:26,0:19:3.01:39,3,0	1/1:20,0:18:8.96:70,9,0	1/1:21,3:22:11.69:121,12,0	1/1:18,0:15:4.43:29,4,0	0/1:32,0:23:9.62:309,0,10	0/1:22,0:20:1.05:1,0,278	1/1:5,0:2:2.97:20,3,0
chr10	30903806	.	GTC	G	1490.55	PASS	AB=0.990;AC=28;AF=0.560;AN=50;BaseQRankSum=5.824;DP=615;FS=14.736;HRun=0;HaplotypeScore=154.6001;InbreedingCoeff=-0.0698;MQ=36.83;MQ0=58;MQRankSum=-0.774;QD=3.11;ReadPosRankSum=3.127;VQSLOD=1.9795;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:39,0:33:1.44:21,1,0	0/0:6,0:6:2.29:0,2,12	./.	./.	0/1:15,0:10:0.16:0,0,0	./.	0/0:37,0:34:2.90:0,3,18	0/1:42,0:32:55.49:161,0,55	0/0:27,0:24:30.45:0,30,545	0/1:26,0:22:72.21:72,0,186	1/1:13,0:13:6.45:48,6,0	0/1:31,0:28:21.67:141,0,22	0/1:19,2:16:30.50:253,0,30	0/1:15,0:13:0.09:0,0,0	0/0:21,0:18:23.82:0,24,315	0/1:21,0:18:12.96:102,0,13	0/1:30,1:30:62.47:114,0,62	0/1:19,0:18:41.42:41,0,47	0/1:15,0:10:37.62:91,0,38	1/1:15,6:17:3.01:39,3,0	1/1:48,0:38:8.06:32,8,0	0/0:23,0:18:1.25:0,1,3	0/1:15,0:13:0.04:0,0,0	1/1:32,1:31:0.18:18,0,0	1/1:20,0:17:2.82:40,3,0	0/1:28,0:23:45.62:249,0,46	1/1:21,0:19:15.36:181,15,0	1/1:5,0:2:2.99:24,3,0
chr10	30903808	.	CTG	C	1429.04	PASS	AB=0.976;AC=31;AF=0.620;AN=50;BaseQRankSum=4.898;DP=611;FS=1.640;HRun=0;HaplotypeScore=151.5278;InbreedingCoeff=0.1177;MQ=37.50;MQ0=55;MQRankSum=-3.449;QD=2.89;ReadPosRankSum=3.400;VQSLOD=2.5529;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:39,0:33:0.12:0,0,3	1/1:6,0:6:0.47:1,0,0	./.	./.	0/1:11,1:9:0.16:0,0,0	./.	0/0:38,0:35:2.95:0,3,24	0/1:44,0:34:12.11:375,0,12	0/1:27,1:25:24.06:24,0,558	0/1:25,1:22:31.79:32,0,115	1/1:12,0:12:0.47:1,0,0	0/1:32,0:29:22.27:63,0,22	1/1:18,3:16:8.80:139,9,0	0/1:16,0:14:0.09:0,0,0	0/0:22,0:19:24.05:0,24,338	0/1:21,0:18:34.18:53,0,34	1/1:33,0:32:10.20:72,10,0	1/1:19,0:18:5.71:54,6,0	0/1:13,2:10:4.49:121,0,4	1/1:17,2:15:3.01:33,3,0	1/1:39,7:36:9.30:107,9,0	0/1:23,0:18:0:0,0,0	0/1:16,0:14:0.04:0,0,0	0/0:31,0:30:0.47:0,0,1	1/1:19,0:16:2.80:23,3,0	1/1:23,3:22:3.84:191,4,0	1/1:13,7:18:23.99:261,24,0	0/0:5,0:2:0:0,0,0
chr10	30903818	.	GTGTGTGTGTA	G	4592.85	PASS	AB=0.652;AC=26;AF=0.481;AN=54;BaseQRankSum=-0.141;DP=568;FS=0.636;HRun=0;HaplotypeScore=138.8254;InbreedingCoeff=0.3831;MQ=39.69;MQ0=41;MQRankSum=-4.255;QD=13.75;ReadPosRankSum=-0.165;VQSLOD=3.8705;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:13,24:33:1.27:18,0,1	1/1:2,4:6:0.47:1,0,0	0/0:6,0:4:12.04:0,12,213	0/0:11,0:2:6.02:0,6,121	1/1:9,4:11:8.74:147,9,0	./.	0/0:6,24:29:0.32:0,0,1	1/1:10,30:33:89.99:1309,90,0	0/0:22,0:20:47.99:0,48,1482	0/1:22,0:21:72.83:171,0,73	1/1:11,0:11:0.47:1,0,0	0/1:10,21:28:17.50:408,0,17	1/1:16,6:17:16.12:681,16,0	0/1:3,13:15:0.08:0,0,0	0/0:19,0:16:24.08:0,24,785	0/1:5,14:16:75.46:263,0,75	1/1:8,24:32:14.84:311,15,0	0/1:4,15:18:30.71:163,0,31	0/0:15,0:10:13.60:0,14,163	0/0:14,0:13:3:0,3,25	0/0:42,0:33:11.38:0,11,106	1/1:11,11:17:2.80:13,3,0	0/0:5,9:12:0.37:0,0,1	0/0:5,27:31:0:0,0,0	1/1:3,12:13:5.78:129,6,0	1/1:17,5:19:42.60:906,43,0	0/0:13,0:11:23.65:0,24,323	1/1:4,0:2:3.01:71,3,0
chr10	30903820	.	GTGTGTGTA	G	2490.79	PASS	AB=1.000;AC=27;AF=0.500;AN=54;BaseQRankSum=2.360;DP=564;FS=3.247;HRun=0;HaplotypeScore=138.7688;InbreedingCoeff=0.4599;MQ=40.21;MQ0=38;MQRankSum=-4.212;QD=7.66;ReadPosRankSum=-0.453;VQSLOD=2.1661;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:37,0:33:1.90:2,0,2	1/1:6,0:6:0.47:1,0,0	0/0:8,0:5:8.17:0,8,151	0/0:13,0:3:8.99:0,9,131	1/1:13,0:12:8.43:51,8,0	./.	0/0:29,0:28:0.32:0,0,1	1/1:39,0:33:67.04:468,67,0	0/0:24,0:22:53.69:0,54,1365	1/1:11,11:21:26.54:465,27,0	1/1:1,8:9:0.47:1,0,0	0/1:31,0:28:23.43:226,0,23	1/1:21,0:16:26.44:405,26,0	0/1:17,0:15:0.09:0,0,0	0/0:18,0:15:21.07:0,21,682	0/1:19,0:16:86.39:157,0,86	1/1:31,0:31:11.62:186,12,0	0/1:18,0:18:22.43:90,0,22	0/0:15,0:10:10.65:0,11,122	0/0:15,0:14:2.98:0,3,37	0/0:42,0:33:8.19:0,8,67	1/1:18,0:16:0.47:1,0,0	0/0:13,0:11:0.37:0,0,0	0/0:32,0:31:0:0,0,0	1/1:15,0:13:5.87:73,6,0	1/1:22,0:20:38.94:487,39,0	0/0:15,0:13:23.60:0,24,287	1/1:4,0:2:3.01:35,3,0
chr10	30903920	.	C	CA	4003.61	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-9.080;DP=622;FS=5.291;HRun=0;HaplotypeScore=70.2961;InbreedingCoeff=0.9941;MQ=69.74;MQ0=0;MQRankSum=-0.350;QD=40.85;ReadPosRankSum=0.300;VQSLOD=4.1966;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:40:93.31:0,93,1284	0/0:5,0:5:15.05:0,15,209	0/0:15,0:14:36.08:0,36,465	0/0:12,0:11:21.74:0,22,291	0/0:29,0:29:87.28:0,87,1189	0/0:20,0:20:57.19:0,57,791	0/0:23,0:23:63.16:0,63,838	0/0:32,0:32:93.23:0,93,1209	0/0:22,0:22:63.20:0,63,862	0/0:27,0:27:75.22:0,75,987	0/0:13,0:13:39.10:0,39,521	0/0:31,0:30:84.27:0,84,1151	0/0:12,0:11:27.09:0,27,366	0/0:13,0:13:30.10:0,30,416	0/0:25,0:25:72.24:0,72,995	0/0:18,0:17:42.14:0,42,585	0/0:31,0:30:81.17:0,81,1060	0/0:17,0:17:41.89:0,42,586	1/1:0,20:20:60.16:868,60,0	1/1:1,15:17:51.17:788,51,0	1/1:0,35:34:84.29:1340,84,0	0/0:16,0:16:39.13:0,39,542	0/0:19,0:19:54.18:0,54,748	0/0:32,0:32:72.24:0,72,1003	0/0:23,0:23:69.23:0,69,963	0/0:27,0:27:75.25:0,75,1045	1/1:1,25:26:63.21:1006,63,0	0/0:20,0:20:60.20:0,60,837
chr10	30904053	.	CT	C	2378.64	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=7.957;DP=555;FS=10.170;HRun=4;HaplotypeScore=56.1285;InbreedingCoeff=0.9995;MQ=80.49;MQ0=0;MQRankSum=0.166;QD=30.89;ReadPosRankSum=0.897;VQSLOD=3.3393;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,108,1446	0/0:10,0:10:27.06:0,27,344	0/0:24,0:24:69.12:0,69,886	0/0:15,0:15:35.78:0,36,410	0/0:26,0:26:75.23:0,75,1018	0/0:20,0:20:60.20:0,60,840	0/0:16,0:16:48.13:0,48,634	0/0:31,0:31:84.24:0,84,1077	0/0:23,0:23:54.13:0,54,756	0/0:19,0:19:48.13:0,48,625	0/0:16,0:16:45.14:0,45,612	0/0:16,0:15:45.15:0,45,630	0/0:14,0:14:42.13:0,42,559	0/0:17,0:17:51.16:0,51,697	0/0:16,0:16:48.14:0,48,638	0/0:11,0:11:33.10:0,33,445	0/0:31,0:31:87.26:0,87,1188	0/0:23,0:23:63.21:0,63,879	1/1:0,14:14:39.12:468,39,0	1/1:0,16:16:48.11:561,48,0	1/1:2,24:26:66.20:792,66,0	0/0:22,0:21:48.16:0,48,672	0/0:17,0:17:45.15:0,45,627	0/0:18,0:18:54.18:0,54,754	0/0:17,0:17:48.12:0,48,650	0/0:26,0:26:75.23:0,75,1014	1/1:0,21:21:60.18:719,60,0	0/0:12,0:12:33.08:0,33,425
chr10	30904198	.	TG	T	235.30	PASS	AB=0.845;AC=3;AF=0.054;AN=56;BaseQRankSum=5.714;DP=564;FS=5.093;HRun=2;HaplotypeScore=74.6441;InbreedingCoeff=0.1263;MQ=61.82;MQ0=28;MQRankSum=-3.877;QD=3.86;ReadPosRankSum=-2.696;VQSLOD=-0.5491;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:45:99:0,135,1932	0/0:9,0:9:19.88:0,20,270	0/0:42,0:13:27.03:0,27,339	0/0:52,0:18:31.13:0,31,481	0/0:32,0:32:84.14:0,84,1145	0/0:21,0:20:45.27:0,45,824	0/0:9,0:9:23.95:0,24,302	0/0:33,0:32:82.78:0,83,1119	0/0:9,2:11:0.95:0,1,305	0/1:12,7:17:99:234,0,248	0/0:10,1:11:12:0,12,145	0/0:9,0:9:23.11:0,23,320	0/0:10,0:10:27.09:0,27,396	0/0:12,0:12:36.09:0,36,509	0/0:7,0:6:14.08:0,14,181	0/0:9,0:8:24.08:0,24,354	0/0:43,0:43:99:0,118,1675	0/0:17,0:17:51.17:0,51,754	0/1:25,1:23:89.16:89,0,453	0/1:13,3:12:0:0,0,0	0/0:12,0:11:23.02:0,23,251	0/0:16,0:16:45.15:0,45,663	0/0:21,0:21:54.18:0,54,793	0/0:23,0:23:66.22:0,66,953	0/0:16,0:16:42.14:0,42,613	0/0:21,0:19:53.77:0,54,753	0/0:14,0:14:32.59:0,33,414	0/0:7,0:7:21.07:0,21,315
chr10	30904239	.	CGCATGTTCATAGCT	C	669.89	PASS	AC=4;AF=0.077;AN=52;BaseQRankSum=4.647;DP=400;FS=8.176;HRun=0;HaplotypeScore=164.7533;InbreedingCoeff=0.9159;MQ=74.69;MQ0=1;MQRankSum=-2.494;QD=51.53;ReadPosRankSum=1.257;VQSLOD=2.7542;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:34:90.31:0,90,5679	0/0:7,0:7:21.07:0,21,1381	0/0:8,0:5:12.04:0,12,424	0/0:12,0:11:30.05:0,30,956	0/0:31,0:31:84.26:0,84,4786	0/0:14,0:14:39.13:0,39,2342	0/0:14,0:14:39.13:0,39,2576	0/0:9,0:9:24.08:0,24,1217	0/0:11,0:11:30.10:0,30,1929	0/0:18,0:18:51.18:0,51,3388	0/0:12,0:12:27.09:0,27,1546	0/0:9,0:9:27.09:0,27,1753	0/0:9,0:9:27.08:0,27,1284	0/0:15,0:15:42.14:0,42,2658	0/0:9,0:9:24.07:0,24,1405	0/0:9,0:9:27.09:0,27,1538	0/0:38,0:38:84.29:0,84,5801	0/0:22,0:22:63.18:0,63,3635	1/1:3,4:7:18.02:536,18,0	./.	./.	0/0:15,0:15:42.14:0,42,2714	0/0:23,0:23:63.22:0,63,4041	0/0:19,0:19:51.13:0,51,2958	0/0:18,0:18:51.18:0,51,3463	0/0:13,0:13:36.12:0,36,2099	1/1:1,5:6:6.02:242,6,0	0/0:10,0:10:30.05:0,30,1380
chr10	30904247	.	CATA	C	77.30	PASS	AC=4;AF=0.077;AN=52;BaseQRankSum=4.537;DP=447;FS=12.924;HRun=0;HaplotypeScore=82.1900;InbreedingCoeff=0.9184;MQ=80.77;MQ0=3;MQRankSum=-4.434;QD=5.95;ReadPosRankSum=2.409;VQSLOD=1.0845;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:39:99:0,117,2708	0/0:9,0:9:27.09:0,27,613	0/0:12,0:11:18.64:0,19,565	0/0:16,0:14:38.91:0,39,722	0/0:34,0:34:96.33:0,96,2350	0/0:17,0:17:51.18:0,51,1214	0/0:18,0:18:54.19:0,54,1327	0/0:21,0:21:63.22:0,63,1507	0/0:14,0:14:42.14:0,42,1033	0/0:20,0:20:60.20:0,60,1435	0/0:10,0:10:30.10:0,30,734	0/0:12,0:12:36.12:0,36,884	0/0:9,0:9:27.09:0,27,638	0/0:14,0:14:42.12:0,42,930	0/0:10,0:10:27.09:0,27,663	0/0:9,0:9:27.08:0,27,617	0/0:33,0:33:96.33:0,96,2333	0/0:24,0:24:72.25:0,72,1668	1/1:4,2:6:11.96:110,12,0	./.	./.	0/0:16,0:16:48.15:0,48,1135	0/0:26,0:26:78.27:0,78,1882	0/0:21,0:21:63.22:0,63,1444	0/0:20,0:20:60.21:0,60,1476	0/0:13,0:13:36.12:0,36,845	1/1:6,1:6:6.01:72,6,0	0/0:9,0:9:27.09:0,27,665
chr10	30904252	.	CT	C	55.32	PASS	AC=4;AF=0.077;AN=52;BaseQRankSum=4.990;DP=449;FS=5.087;HRun=1;HaplotypeScore=64.5874;InbreedingCoeff=0.9040;MQ=80.37;MQ0=3;MQRankSum=-2.865;QD=4.26;ReadPosRankSum=0.550;VQSLOD=0.5083;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:36:99:0,108,1727	0/0:10,0:10:30.10:0,30,479	0/0:12,1:12:9.22:0,9,484	0/0:15,0:14:41.28:0,41,600	0/0:35,0:35:99:0,99,1559	0/0:16,0:16:48.16:0,48,765	0/0:19,0:19:56.56:0,57,871	0/0:24,0:24:72.23:0,72,1110	0/0:13,0:13:39.13:0,39,624	0/0:22,0:22:66.23:0,66,1054	0/0:10,0:10:30.10:0,30,479	0/0:14,0:14:42.13:0,42,645	0/0:9,0:9:27.05:0,27,404	0/0:12,0:12:36.12:0,36,576	0/0:11,0:11:30.10:0,30,478	0/0:8,0:8:24.08:0,24,384	0/0:38,0:38:99:0,111,1769	0/0:20,0:20:60.20:0,60,944	1/1:4,2:6:16.85:109,17,0	./.	./.	0/0:14,0:14:42.14:0,42,672	0/0:25,0:25:75.26:0,75,1197	0/0:21,0:21:63.21:0,63,999	0/0:22,0:22:66.22:0,66,1051	0/0:12,0:12:36.12:0,36,576	1/1:5,2:6:5.84:54,6,0	0/0:9,0:9:27.09:0,27,432
chr10	30904706	.	A	AGAC	3664.02	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=8.262;DP=728;FS=8.054;HRun=0;HaplotypeScore=112.2563;InbreedingCoeff=0.9954;MQ=92.66;MQ0=0;MQRankSum=-4.612;QD=42.12;ReadPosRankSum=2.568;VQSLOD=5.0608;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,123,2128	0/0:13,0:13:39.13:0,39,679	0/0:33,0:33:96.11:0,96,1515	0/0:29,0:29:75.07:0,75,1172	0/0:25,0:25:69.24:0,69,1173	0/0:30,0:30:90.31:0,90,1578	0/0:32,0:32:93.30:0,93,1586	0/0:36,0:36:99:0,105,1780	0/0:15,0:15:45.15:0,45,789	0/0:26,0:26:63.22:0,63,1110	0/0:19,0:19:54.17:0,54,907	0/0:39,0:39:99:0,117,1950	0/0:31,0:31:90.31:0,90,1588	0/0:20,0:20:57.19:0,57,979	0/0:28,0:28:84.29:0,84,1456	0/0:35,0:35:99:0,102,1795	0/0:27,0:27:81.28:0,81,1429	0/0:20,0:20:57.15:0,57,945	1/1:2,11:13:33.08:668,33,0	1/1:0,11:13:15.05:349,15,0	1/1:2,28:30:42.14:970,42,0	0/0:14,0:14:33.11:0,33,577	0/0:28,0:28:78.27:0,78,1340	0/0:31,0:31:93.32:0,93,1619	0/0:29,0:29:84.25:0,84,1399	0/0:23,0:23:66.22:0,66,1138	1/1:2,27:31:72.25:1677,72,0	0/0:12,0:12:36.05:0,36,519
chr10	30905190	.	T	TGTCTGTC	2406.88	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-3.653;DP=884;FS=14.683;HRun=0;HaplotypeScore=226.1743;InbreedingCoeff=0.9853;MQ=70.74;MQ0=6;MQRankSum=-2.166;QD=51.21;ReadPosRankSum=-3.042;VQSLOD=1.5932;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,123,2645	0/0:18,0:18:45.15:0,45,995	0/0:38,0:31:42.13:0,42,695	0/0:55,0:40:62.68:0,63,978	0/0:29,0:29:66.21:0,66,1450	0/0:29,0:29:69.19:0,69,1423	0/0:31,0:31:75.25:0,75,1533	0/0:37,0:37:93.30:0,93,1589	0/0:27,0:27:75.26:0,75,1669	1/1:8,22:33:75.24:2073,75,0	1/1:4,8:14:12.51:450,13,0	0/0:27,0:27:60.19:0,60,1342	0/0:49,0:49:99:0,135,2981	0/0:26,0:26:69.21:0,69,1579	0/0:37,0:37:96.30:0,96,1969	0/0:32,0:32:81.28:0,81,1786	0/0:37,0:37:96.33:0,96,2148	0/0:26,0:26:63.22:0,63,1398	0/0:22,0:22:36.12:0,36,664	0/0:24,0:24:54.18:0,54,1215	0/0:48,0:47:99:0,105,2365	0/0:29,0:29:69.24:0,69,1493	0/0:19,0:19:48.16:0,48,1098	0/0:59,0:58:99:0,157,3446	0/0:19,0:19:45.15:0,45,1056	0/0:28,0:28:60.21:0,60,1232	0/0:29,0:29:72.25:0,72,1517	0/0:11,0:11:33.11:0,33,741
chr10	30905320	.	T	TG	2798.84	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=14.065;DP=735;FS=4.374;HRun=0;HaplotypeScore=94.5138;InbreedingCoeff=0.9941;MQ=92.51;MQ0=0;MQRankSum=-3.690;QD=30.42;ReadPosRankSum=-0.121;VQSLOD=3.3110;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:90.29:0,90,1239	0/0:10,0:10:30.10:0,30,418	0/0:38,0:38:73.48:0,73,1249	0/0:30,0:30:81.19:0,81,1044	0/0:11,0:11:33.11:0,33,460	0/0:19,0:20:35.26:0,35,772	0/0:33,0:33:99:0,99,1381	0/0:39,0:39:99:0,114,1595	0/0:47,0:47:99:0,135,1832	0/0:25,0:25:72.24:0,72,998	0/0:17,0:17:48.15:0,48,653	0/0:32,0:32:96.32:0,96,1332	0/0:25,0:25:75.25:0,75,1044	0/0:31,0:31:93.28:0,93,1265	0/0:42,0:42:99:0,126,1760	0/0:38,0:38:99:0,114,1594	0/0:33,0:33:99:0,99,1385	0/0:25,0:25:72.24:0,72,1007	1/1:6,9:15:14.10:410,14,0	1/1:2,17:20:60.11:702,60,0	1/1:3,26:29:75.15:940,75,0	0/0:15,0:15:45.15:0,45,628	0/0:16,0:16:48.16:0,48,669	0/0:35,0:35:99:0,99,1381	0/0:18,0:18:51.17:0,51,712	0/0:19,0:19:57.19:0,57,795	1/1:1,27:28:84.02:906,84,0	0/0:11,0:11:30.10:0,30,420
chr10	30905321	.	CATG	C	2898.54	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=14.121;DP=737;FS=6.149;HRun=0;HaplotypeScore=120.4774;InbreedingCoeff=0.9994;MQ=93.79;MQ0=0;MQRankSum=-5.237;QD=31.85;ReadPosRankSum=-0.067;VQSLOD=3.8246;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:84.29:0,84,1892	0/0:10,0:10:27.09:0,27,622	0/0:38,0:38:94.49:0,94,1939	0/0:32,0:32:78.19:0,78,1542	0/0:13,0:13:33.08:0,33,671	0/0:20,0:20:60.07:0,60,1327	0/0:33,0:33:96.33:0,96,2166	0/0:39,0:39:99:0,105,2404	0/0:46,0:46:99:0,129,2789	0/0:25,0:25:69.21:0,69,1589	0/0:17,0:17:45.14:0,45,960	0/0:32,0:32:93.32:0,93,2118	0/0:26,0:26:75.23:0,75,1634	0/0:30,0:30:87.26:0,87,1892	0/0:42,0:42:99:0,120,2679	0/0:38,0:38:99:0,111,2538	0/0:33,0:33:99:0,99,2260	0/0:25,0:25:75.20:0,75,1678	1/1:5,7:13:36.07:447,36,0	1/1:4,16:21:59.99:740,60,0	1/1:4,25:29:66.21:893,66,0	0/0:15,0:15:42.14:0,42,925	0/0:16,0:16:45.15:0,45,986	0/0:35,0:35:99:0,99,2211	0/0:18,0:18:45.15:0,45,1018	0/0:20,0:20:54.17:0,54,1162	1/1:2,26:28:81.22:979,81,0	0/0:11,0:11:30.10:0,30,691
chr10	30905324	.	G	GC	2943.07	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=13.499;DP=716;FS=7.949;HRun=0;HaplotypeScore=89.4441;InbreedingCoeff=0.9994;MQ=94.48;MQ0=0;MQRankSum=-5.395;QD=31.31;ReadPosRankSum=0.291;VQSLOD=2.7440;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:87.12:0,87,1188	0/0:10,0:10:27.09:0,27,378	0/0:37,0:37:99:0,105,1330	0/0:30,0:30:78.25:0,78,1066	0/0:11,0:11:33.11:0,33,462	0/0:20,0:20:50.66:0,51,788	0/0:34,0:34:99:0,99,1348	0/0:37,0:37:99:0,108,1510	0/0:43,0:43:99:0,126,1760	0/0:25,0:25:69.23:0,69,965	0/0:15,0:15:45.15:0,45,629	0/0:31,0:31:93.31:0,93,1301	0/0:24,0:24:72.24:0,72,1004	0/0:29,0:29:87.29:0,87,1215	0/0:39,0:39:99:0,117,1636	0/0:37,0:37:99:0,111,1535	0/0:33,0:33:99:0,99,1383	0/0:26,0:26:78.23:0,78,1070	1/1:9,4:14:36.09:470,36,0	1/1:17,3:20:60.18:792,60,0	1/1:25,3:28:66.18:869,66,0	0/0:15,0:15:42.14:0,42,587	0/0:15,0:15:45.13:0,45,611	0/0:35,0:35:99:0,99,1384	0/0:15,0:15:45.15:0,45,628	0/0:18,0:18:54.17:0,54,738	1/1:30,2:32:84.20:973,84,0	0/0:11,0:11:30.10:0,30,420
chr10	30905569	.	GAA	G	2662.82	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=6.519;DP=602;FS=3.096;HRun=11;HaplotypeScore=78.8243;InbreedingCoeff=0.9823;MQ=69.19;MQ0=1;MQRankSum=-0.278;QD=24.43;ReadPosRankSum=1.909;VQSLOD=3.7582;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:31:86.77:0,87,1269	0/0:13,0:13:36.12:0,36,554	0/0:13,0:11:21.07:0,21,315	0/0:11,0:10:14.50:0,14,208	0/0:27,0:30:82.74:0,83,1158	0/0:20,0:20:48.13:0,48,713	0/0:19,0:20:50.64:0,51,709	0/0:18,1:19:19.24:0,19,705	0/0:19,0:19:53.67:0,54,794	0/0:6,0:25:69.07:0,69,684	0/0:9,0:31:72.09:0,72,711	0/0:20,0:21:59.68:0,60,866	0/0:23,0:23:66.14:0,66,961	0/0:24,0:24:66.22:0,66,1016	0/0:19,0:21:51.17:0,51,768	0/0:17,0:18:42.14:0,42,629	0/0:31,0:32:83.77:0,84,1253	0/0:17,0:22:53.63:0,54,697	1/1:4,28:31:70.49:820,70,0	1/1:4,30:34:53.06:918,53,0	1/1:1,10:11:27.07:287,27,0	0/0:22,0:22:57.18:0,57,842	0/0:16,0:18:50.57:0,51,703	0/0:7,0:9:11.53:0,12,145	0/0:23,1:27:39.26:0,39,890	0/0:11,0:13:35.60:0,36,496	1/1:2,30:32:75.18:798,75,0	0/0:8,0:11:32.08:0,32,415
chr10	30905830	.	GAA	G	4568.56	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=14.431;DP=718;FS=19.734;HRun=4;HaplotypeScore=89.1206;InbreedingCoeff=0.9998;MQ=76.89;MQ0=1;MQRankSum=-1.674;QD=38.72;ReadPosRankSum=1.580;VQSLOD=3.4997;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,144,2572	0/0:14,0:14:36.12:0,36,674	0/0:17,0:16:36.12:0,36,657	0/0:27,0:27:46.49:0,46,1006	0/0:26,0:26:78.27:0,78,1439	0/0:30,0:30:87.29:0,87,1599	0/0:14,0:14:33.07:0,33,582	0/0:28,0:28:81.25:0,81,1423	0/0:26,0:26:72.25:0,72,1320	0/0:27,0:27:81.27:0,81,1445	0/0:16,0:16:48.16:0,48,899	0/0:28,0:28:84.29:0,84,1544	0/0:22,0:22:63.22:0,63,1175	0/0:21,0:21:63.20:0,63,1078	0/0:33,0:33:93.29:0,93,1626	0/0:29,0:29:84.27:0,84,1509	0/0:27,0:27:81.24:0,81,1409	0/0:31,0:31:93.23:0,93,1587	1/1:0,24:24:72.24:1045,72,0	1/1:0,27:27:75.25:1096,75,0	1/1:0,28:27:69.23:1016,69,0	0/0:17,0:17:48.16:0,48,885	0/0:19,0:19:57.09:0,57,1027	0/0:30,0:30:87.28:0,87,1570	0/0:23,0:23:69.21:0,69,1245	0/0:33,0:33:96.33:0,96,1780	1/1:1,38:38:95.87:1412,96,0	0/0:13,0:13:39.13:0,39,731
chr10	30907017	.	AT	A	2288.93	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=12.916;DP=549;FS=2.744;HRun=6;HaplotypeScore=57.3685;InbreedingCoeff=0.9929;MQ=75.05;MQ0=0;MQRankSum=0.204;QD=26.62;ReadPosRankSum=2.687;VQSLOD=4.1975;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:96.19:0,96,1172	0/0:5,0:5:15.05:0,15,197	0/0:19,0:19:42.13:0,42,535	0/0:10,0:10:17.95:0,18,203	0/0:27,0:27:75.23:0,75,972	0/0:20,0:20:60.19:0,60,788	0/0:13,0:13:36.11:0,36,461	0/0:37,0:37:99:0,102,1319	0/0:23,0:23:54.16:0,54,694	0/0:21,0:21:51.15:0,51,645	0/0:18,0:18:54.16:0,54,694	0/0:17,0:17:51.15:0,51,654	0/0:11,0:11:33.11:0,33,432	0/0:16,0:16:45.15:0,45,590	0/0:21,0:21:60.19:0,60,781	0/0:22,0:22:63.16:0,63,770	0/0:22,0:22:66.21:0,66,861	0/0:25,0:24:72.23:0,72,945	1/1:1,11:12:33.08:354,33,0	1/1:3,17:20:51.13:548,51,0	1/1:1,18:18:48.12:516,48,0	0/0:13,0:13:36.12:0,36,469	0/0:21,0:21:57.18:0,57,746	0/0:12,0:12:30.08:0,30,374	0/0:12,0:12:33.11:0,33,425	0/0:22,0:22:66.21:0,66,864	1/1:1,34:35:96.24:1032,96,0	0/0:21,0:21:60.20:0,60,789
chr10	30907486	.	T	TATATAC	1469.65	PASS	AB=1.000;AC=8;AF=0.143;AN=56;BaseQRankSum=-2.628;DP=569;FS=0.816;HRun=0;HaplotypeScore=155.1123;InbreedingCoeff=0.6661;MQ=64.83;MQ0=10;MQRankSum=-2.889;QD=13.01;ReadPosRankSum=-2.601;VQSLOD=2.7924;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:41:96.25:0,96,2016	0/0:13,0:13:21.07:0,21,482	0/1:25,0:11:3.74:4,0,124	0/1:36,0:17:25.44:25,0,141	0/0:29,0:29:63.18:0,63,1326	0/0:13,0:13:36.12:0,36,829	0/0:22,0:22:54.14:0,54,1089	0/0:17,0:17:45.12:0,45,863	0/0:14,0:14:39.10:0,39,805	0/0:17,0:17:39.04:0,39,794	0/0:22,0:22:42.04:0,42,841	0/0:14,0:14:33.08:0,33,668	0/0:21,0:21:60.13:0,60,1222	0/0:13,0:13:36.11:0,36,783	0/0:22,0:22:56.95:0,57,1218	0/0:14,0:14:39.13:0,39,894	0/0:30,0:30:69.17:0,69,1445	0/0:31,0:31:75.24:0,75,1627	1/1:3,6:10:18.01:464,18,0	1/1:6,10:16:3.48:106,3,0	0/0:1,5:6:0:0,0,0	0/0:16,0:16:36.12:0,36,811	0/0:15,0:15:45.14:0,45,955	0/0:25,0:24:72.20:0,72,1490	0/0:21,0:21:57.18:0,57,1194	0/0:25,0:25:69.20:0,69,1399	1/1:8,18:26:26.11:1009,26,0	0/0:14,0:14:33.11:0,33,755
chr10	30907496	.	CGT	C	8298.39	PASS	AB=0.830;AC=37;AF=0.685;AN=54;BaseQRankSum=0.402;DP=590;FS=1.688;HRun=0;HaplotypeScore=96.1534;InbreedingCoeff=0.7504;MQ=62.15;MQ0=10;MQRankSum=3.408;QD=20.09;ReadPosRankSum=5.437;VQSLOD=4.8127;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,27:39:68.87:774,69,0	1/1:0,13:14:26.91:298,27,0	0/0:32,0:13:24.20:0,24,277	0/0:40,0:21:26.64:0,27,324	1/1:7,19:28:41.96:476,42,0	1/1:6,9:16:26.91:299,27,0	1/1:7,14:23:35.94:405,36,0	1/1:5,13:19:38.93:428,39,0	0/1:13,2:15:34.97:35,0,413	0/0:13,0:19:27.04:0,27,305	0/0:16,0:19:9.01:0,9,96	1/1:2,10:12:30.09:355,30,0	1/1:5,18:23:54.17:640,54,0	1/1:3,11:15:29.92:334,30,0	0/0:21,2:23:12.61:0,13,678	1/1:2,13:15:36.11:427,36,0	1/1:8,22:30:48.15:569,48,0	1/1:12,17:29:48.15:569,48,0	0/0:12,0:12:22.18:0,22,202	0/1:14,0:14:0.02:0,0,0	./.	1/1:2,13:16:35.93:393,36,0	1/1:7,9:16:29.92:334,30,0	0/1:10,17:28:29.11:493,0,29	1/1:8,12:20:30.09:355,30,0	1/1:6,21:27:63.19:746,63,0	0/0:23,0:21:2.97:0,3,20	1/1:1,10:12:32.93:369,33,0
chr10	30908563	.	A	AT	9883.67	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-5.501;DP=453;FS=9.427;HRun=8;HaplotypeScore=50.8474;InbreedingCoeff=0.9578;MQ=80.04;MQ0=0;MQRankSum=-3.674;QD=24.71;ReadPosRankSum=3.649;VQSLOD=5.2639;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,18:20:51.15:589,51,0	1/1:1,3:4:9.03:104,9,0	0/0:15,0:15:14.42:0,14,285	0/0:11,0:10:15.35:0,15,119	1/1:2,29:31:84.24:961,84,0	1/1:0,18:18:45.13:519,45,0	1/1:0,10:10:24.07:277,24,0	1/1:9,24:33:72.19:809,72,0	0/0:7,0:7:18:0,18,165	1/1:2,13:15:39.12:449,39,0	1/1:3,13:16:35.98:383,36,0	1/1:1,10:11:21.06:242,21,0	1/1:3,11:14:30.09:345,30,0	1/1:2,7:9:18.05:208,18,0	0/0:20,0:20:57:0,57,512	1/1:1,14:15:14.66:423,15,0	1/1:1,14:15:39.12:450,39,0	1/1:0,13:13:39.12:450,39,0	1/1:5,3:33:68.13:429,68,0	1/1:2,0:23:59.92:315,60,0	1/1:0,0:11:28.41:144,28,0	1/1:2,14:16:39.12:450,39,0	1/1:2,12:14:27.07:312,27,0	1/1:0,5:5:15.04:173,15,0	1/1:2,23:25:69.21:796,69,0	1/1:3,15:18:38.16:510,38,0	1/1:2,1:23:52.09:303,52,0	1/1:1,7:8:21.06:242,21,0
chr10	30909084	.	T	TTAAGGAG	9048.54	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=9.387;DP=688;FS=6.342;HRun=0;HaplotypeScore=158.9676;InbreedingCoeff=0.9950;MQ=91.75;MQ0=0;MQRankSum=-11.815;QD=105.22;ReadPosRankSum=-0.314;VQSLOD=5.8632;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,108,2839	0/0:10,0:10:27.09:0,27,741	0/0:35,0:35:99:0,103,2600	0/0:24,0:24:63.22:0,63,1623	0/0:29,0:29:81.28:0,81,2263	0/0:24,0:24:66.21:0,66,1786	0/0:23,0:23:69.22:0,69,1868	0/0:29,0:29:87.27:0,87,2151	0/0:21,0:21:60.21:0,60,1634	0/0:27,0:27:78.26:0,78,2026	0/0:17,0:17:48.15:0,48,1215	0/0:38,0:38:99:0,114,3118	0/0:24,0:24:69.24:0,69,1867	0/0:22,0:22:63.20:0,63,1701	0/0:32,0:32:96.30:0,96,2517	0/0:22,0:22:66.21:0,66,1786	0/0:33,0:33:99:0,99,2707	0/0:11,0:11:30.01:0,30,695	1/1:8,8:22:63.17:2037,63,0	1/1:2,20:25:75.17:2803,75,0	1/1:2,4:7:15.05:604,15,0	0/0:29,0:29:84.29:0,84,2315	0/0:24,0:24:69.17:0,69,1759	0/0:23,0:23:69.20:0,69,1797	0/0:23,0:23:69.24:0,69,1857	0/0:34,0:34:99:0,102,2667	1/1:2,27:32:87.30:3605,87,0	0/0:10,0:10:30.10:0,30,839
chr10	30909568	.	C	CT	3934.62	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-0.929;DP=692;FS=0.859;HRun=1;HaplotypeScore=65.5695;InbreedingCoeff=0.9991;MQ=88.11;MQ0=0;MQRankSum=-2.886;QD=41.86;ReadPosRankSum=0.666;VQSLOD=4.0222;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,99,1237	0/0:8,0:8:24.08:0,24,312	0/0:26,0:26:72.19:0,72,882	0/0:22,0:22:40.31:0,40,748	0/0:30,0:30:84.27:0,84,1090	0/0:20,0:20:60.20:0,60,779	0/0:28,0:28:84.26:0,84,1074	0/0:30,0:30:87.27:0,87,1117	0/0:17,0:18:53.76:0,54,669	0/0:29,0:29:84.26:0,84,1078	0/0:13,0:13:39.13:0,39,506	0/0:25,0:25:75.23:0,75,958	0/0:26,0:26:75.23:0,75,957	0/0:32,0:32:93.30:0,93,1207	0/0:39,0:39:99:0,114,1464	0/0:29,0:29:87.28:0,87,1128	0/0:32,0:32:90.27:0,90,1151	0/0:25,0:25:75.21:0,75,955	1/1:0,16:16:48.15:698,48,0	1/1:1,17:18:51.17:764,51,0	1/1:1,23:24:66.22:989,66,0	0/0:15,0:15:45.15:0,45,584	0/0:22,0:22:66.21:0,66,840	0/0:27,0:27:78.25:0,78,1011	0/0:18,0:18:54.18:0,54,701	0/0:38,0:38:99:0,111,1417	1/1:1,35:36:99:1483,99,0	0/0:9,0:9:27.09:0,27,350
chr10	30909713	.	G	GCC	5161.16	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-0.177;DP=565;FS=10.537;HRun=2;HaplotypeScore=79.1499;InbreedingCoeff=0.9985;MQ=90.01;MQ0=0;MQRankSum=-3.173;QD=44.49;ReadPosRankSum=-2.312;VQSLOD=3.2041;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:66.22:0,66,972	0/0:12,0:12:36.09:0,36,506	0/0:20,0:20:60.15:0,60,810	0/0:23,0:23:66.05:0,66,912	0/0:17,0:17:48.16:0,48,707	0/0:16,0:16:48.15:0,48,687	0/0:27,0:27:75.20:0,75,1061	0/0:19,0:19:51.17:0,51,735	0/0:19,0:19:57.18:0,57,819	1/1:2,14:17:48.12:794,48,0	1/1:0,8:9:21.07:393,21,0	0/0:21,0:21:63.21:0,63,926	0/0:24,0:24:69.23:0,69,1015	0/0:21,0:21:60.20:0,60,884	0/0:22,0:22:66.22:0,66,972	0/0:26,0:26:75.25:0,75,1105	0/0:33,0:33:99:0,99,1436	0/0:23,0:23:66.18:0,66,943	1/1:3,20:24:66.20:1167,66,0	1/1:0,11:11:30.10:561,30,0	1/1:5,34:40:81.23:1517,81,0	0/0:13,0:13:33.11:0,33,486	0/0:12,0:12:33.11:0,33,486	0/0:37,0:37:99:0,102,1475	0/0:19,0:19:54.18:0,54,795	0/0:12,0:12:36.12:0,36,530	1/1:1,14:15:39.13:730,39,0	0/0:8,0:8:24.08:0,24,353
chr10	30910388	.	G	GA	4058.59	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=6.944;DP=622;FS=3.062;HRun=2;HaplotypeScore=65.3315;InbreedingCoeff=0.9979;MQ=72.26;MQ0=0;MQRankSum=-2.188;QD=38.65;ReadPosRankSum=2.096;VQSLOD=4.3582;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,99,1212	0/0:12,0:12:36.11:0,36,446	0/0:9,0:9:27.06:0,27,303	0/0:11,0:11:21:0,21,217	0/0:29,0:29:81.25:0,81,1004	0/0:24,0:24:59.67:0,60,730	0/0:14,0:14:39.12:0,39,483	0/0:36,0:36:99:0,105,1280	0/0:17,0:17:51.14:0,51,618	0/0:28,0:28:81.25:0,81,994	0/0:28,0:28:84.26:0,84,1041	0/0:15,0:15:35.91:0,36,446	0/0:27,0:27:66.21:0,66,816	0/0:16,0:16:42:0,42,520	0/0:24,0:24:69.19:0,69,830	0/0:10,0:10:27.08:0,27,335	0/0:39,0:39:99:0,111,1362	0/0:17,0:17:51.12:0,51,613	1/1:1,21:22:63.68:908,64,0	1/1:3,38:41:99:1553,111,0	1/1:1,10:11:27.09:389,27,0	0/0:23,0:23:66.19:0,66,805	0/0:18,0:18:48.14:0,48,582	0/0:15,0:15:42.11:0,42,506	0/0:28,0:28:75.23:0,75,929	0/0:27,0:27:78.22:0,78,934	1/1:0,31:31:84.28:1208,84,0	0/0:15,0:15:45.14:0,45,557
chr10	30910688	.	GGAGA	G	2644.20	PASS	AB=0.887;AC=30;AF=0.577;AN=52;BaseQRankSum=3.021;DP=597;FS=7.238;HRun=0;HaplotypeScore=110.1357;InbreedingCoeff=0.6511;MQ=56.39;MQ0=18;MQRankSum=-3.880;QD=7.78;ReadPosRankSum=0.002;VQSLOD=1.8632;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:22,6:28:6.01:94,6,0	0/0:2,0:7:5.49:0,5,24	./.	0/0:54,0:8:0:0,0,0	1/1:10,6:16:5.25:184,5,0	0/0:19,0:22:23.77:0,24,324	1/1:7,5:13:16.56:198,17,0	1/1:32,0:32:3.08:88,3,0	1/1:5,9:16:8.56:251,9,0	0/0:23,0:23:39.13:0,39,746	0/0:19,0:19:21.07:0,21,378	0/0:7,0:9:2.74:0,3,12	0/0:15,0:17:21.88:0,22,416	0/1:20,2:25:70.58:71,0,124	0/0:21,0:24:41.33:0,41,672	1/1:12,12:23:30.10:451,30,0	1/1:19,6:25:18.04:260,18,0	1/1:18,6:24:15.05:235,15,0	1/1:11,0:14:6.01:56,6,0	1/1:14,0:26:27.03:251,27,0	./.	0/0:9,0:10:8.62:0,9,53	0/1:15,1:16:13.53:41,0,14	0/0:8,0:15:17.28:0,17,95	1/1:19,5:27:18.04:225,18,0	1/1:11,5:17:10.34:164,10,0	1/1:13,0:23:15.49:141,15,0	1/1:6,5:12:9.02:122,9,0
chr10	30910901	.	G	GC	4463.37	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-12.038;DP=675;FS=4.189;HRun=1;HaplotypeScore=65.5704;InbreedingCoeff=0.9897;MQ=74.31;MQ0=0;MQRankSum=-3.515;QD=42.51;ReadPosRankSum=0.621;VQSLOD=5.2093;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,135,1750	0/0:9,0:9:24.08:0,24,312	0/0:26,0:25:69.12:0,69,849	0/0:30,0:30:87.28:0,87,1114	0/0:18,0:18:51.16:0,51,649	0/0:25,0:25:75.24:0,75,974	0/0:37,0:37:99:0,108,1372	0/0:33,0:33:99:0,99,1273	0/0:19,0:19:57.17:0,57,724	0/0:20,0:20:51.17:0,51,662	0/0:16,0:16:39.12:0,39,493	0/0:21,0:21:60.19:0,60,779	0/0:28,0:28:81.24:0,81,1035	0/0:28,0:28:78.25:0,78,1011	0/0:39,0:39:99:0,117,1493	0/0:25,0:25:72.22:0,72,921	0/0:32,0:32:96.30:0,96,1230	0/0:16,0:16:48.14:0,48,608	1/1:0,16:16:48.12:687,48,0	1/1:0,20:21:57.19:854,57,0	1/1:1,37:38:99:1573,105,0	0/0:18,0:18:45.13:0,45,570	0/0:13,0:13:39.13:0,39,506	0/0:29,0:29:78.25:0,78,1009	0/0:10,0:10:21.07:0,21,273	0/0:28,0:28:84.27:0,84,1091	1/1:0,30:30:90.30:1349,90,0	0/0:4,0:4:12.04:0,12,156
chr10	30912654	.	TA	T	15032.27	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=9.938;DP=592;FS=1.671;HRun=3;HaplotypeScore=94.1336;InbreedingCoeff=0.9965;MQ=87.84;MQ0=0;MQRankSum=-4.557;QD=32.47;ReadPosRankSum=3.535;VQSLOD=5.0517;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,37:37:99:1263,102,0	1/1:0,6:6:18.06:223,18,0	0/0:19,0:19:54.17:0,54,720	0/0:26,0:26:34.23:0,34,706	1/1:0,22:22:66.12:797,66,0	1/1:0,24:24:60.12:724,60,0	1/1:1,11:12:33.10:409,33,0	1/1:2,28:30:81.03:940,81,0	0/0:12,0:12:33.11:0,33,473	0/0:30,0:30:90.27:0,90,1245	0/0:25,0:25:75.19:0,75,1038	1/1:0,16:16:45.14:558,45,0	1/1:1,20:21:54.17:669,54,0	1/1:1,24:25:66.15:799,66,0	0/0:17,0:17:51.13:0,51,665	1/1:0,13:13:36.11:446,36,0	1/1:1,31:32:87.27:1078,87,0	1/1:1,21:22:51.16:632,51,0	1/1:0,19:19:57.15:681,57,0	1/1:0,24:24:57.15:690,57,0	1/1:0,19:19:51.16:632,51,0	1/1:1,21:22:48.15:595,48,0	1/1:0,28:28:75.24:930,75,0	1/1:1,19:20:51.16:632,51,0	1/1:1,15:16:39.12:483,39,0	1/1:2,27:29:40.97:885,41,0	1/1:0,20:20:60.19:743,60,0	1/1:0,6:6:18.06:223,18,0
chr10	30913571	.	G	GCCCCCCCCA	2255.24	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-2.915;DP=510;FS=0.762;HRun=0;HaplotypeScore=140.0649;InbreedingCoeff=0.9384;MQ=85.16;MQ0=0;MQRankSum=-3.336;QD=50.12;ReadPosRankSum=-3.430;VQSLOD=2.9500;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:66.19:0,66,1738	0/0:12,0:12:33.05:0,33,812	0/0:20,0:20:41.45:0,41,744	0/0:15,0:15:26.28:0,26,579	0/0:19,0:19:48.12:0,48,1251	0/0:27,0:27:72.24:0,72,1992	0/0:25,0:25:63.11:0,63,1581	0/0:24,0:24:56.97:0,57,1232	0/0:15,0:15:45.14:0,45,1133	0/0:18,0:18:48.16:0,48,1330	0/0:13,0:13:39.12:0,39,1050	0/0:22,0:22:63.21:0,63,1714	0/0:20,0:20:57.19:0,57,1568	0/0:19,0:19:57.16:0,57,1476	0/0:18,0:18:45.15:0,45,1158	0/0:16,0:16:42.13:0,42,1136	0/0:23,0:22:60.13:0,60,1504	0/0:20,0:20:60.21:0,60,1606	1/1:1,1:10:27.07:666,27,0	1/1:6,2:12:11.67:257,12,0	1/1:2,2:7:3.01:141,3,0	0/0:14,0:14:39.13:0,39,1100	0/0:18,0:18:42.13:0,42,1068	0/0:32,0:32:75.24:0,75,2097	0/0:15,0:15:35.99:0,36,906	0/0:22,0:22:60.16:0,60,1601	1/1:5,8:16:33.11:1339,33,0	0/0:10,0:10:27.07:0,27,707
chr10	30913887	.	GCACACACACACACA	G	7389.54	PASS	AB=0.708;AC=33;AF=0.611;AN=54;BaseQRankSum=8.567;DP=539;FS=27.663;HRun=0;HaplotypeScore=204.8130;InbreedingCoeff=0.7142;MQ=68.08;MQ0=13;MQRankSum=-6.821;QD=23.91;ReadPosRankSum=0.606;VQSLOD=2.5182;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:29,8:38:9.03:258,9,0	1/1:4,3:7:6.49:236,6,0	0/0:42,0:27:6.02:0,6,131	0/0:35,0:21:3.01:0,3,60	1/1:7,3:11:6.02:173,6,0	1/1:8,10:17:21.07:823,21,0	1/1:22,4:26:3.01:118,3,0	1/1:24,5:27:12.06:255,12,0	0/0:15,0:14:24.08:0,24,1528	0/0:20,0:19:24.08:0,24,1188	0/0:11,0:15:24.08:0,24,1129	1/1:14,5:19:14.71:481,15,0	1/1:14,8:22:20.98:718,21,0	1/1:4,8:15:22.39:940,22,0	0/0:25,0:27:45.11:0,45,2419	1/1:11,8:21:24.08:861,24,0	1/1:15,6:21:15.05:588,15,0	1/1:12,6:18:8.81:345,9,0	0/0:14,0:14:17.25:0,17,799	0/0:7,0:8:6.02:0,6,374	0/0:35,0:37:45.63:0,46,2498	1/1:8,1:9:3:118,3,0	1/1:5,6:11:6.44:235,6,0	1/1:13,1:15:3.01:71,3,0	1/1:5,7:12:18.06:705,18,0	0/1:10,5:17:99:466,0,123	0/0:15,0:14:18.53:0,19,959	./.
chr10	30914649	.	GA	G	4459.55	PASS	AB=0.702;AC=39;AF=0.696;AN=56;BaseQRankSum=-7.248;DP=538;FS=4.750;HRun=13;HaplotypeScore=75.4047;InbreedingCoeff=0.7181;MQ=69.11;MQ0=11;MQRankSum=1.198;QD=11.35;ReadPosRankSum=4.020;VQSLOD=4.8319;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,13:20:17.67:255,18,0	1/1:1,8:9:20.88:153,21,0	0/0:37,0:15:9.28:0,9,110	0/1:44,1:21:0.47:0,0,176	1/1:5,13:18:12.99:238,13,0	0/1:4,15:20:16.17:187,0,16	1/1:4,12:16:26.83:197,27,0	1/1:13,16:29:15.03:322,15,0	0/0:13,0:14:33.33:0,33,355	1/1:4,10:17:33.26:216,33,0	1/1:4,9:13:26.83:196,27,0	1/1:4,10:15:28.55:192,29,0	1/1:1,12:13:29.83:219,30,0	1/1:3,12:16:31.83:224,32,0	0/0:15,1:15:12.70:0,13,274	1/1:2,13:15:3.64:190,4,0	1/1:7,25:34:76.24:526,76,0	1/1:2,17:19:18.55:299,19,0	0/0:12,0:23:20.09:0,20,184	0/0:6,0:11:14.63:0,15,89	0/0:2,0:14:11.36:0,11,57	1/1:4,5:8:5.92:44,6,0	1/1:2,8:11:22.91:159,23,0	1/1:3,11:14:23.85:175,24,0	0/1:3,8:12:25.39:74,0,25	1/1:3,15:20:19.62:289,20,0	0/0:15,0:28:59.70:0,60,341	1/1:6,17:21:20.58:305,21,0
chr10	30914962	.	AGTGTGTGT	A	4523.03	PASS	AB=0.724;AC=33;AF=0.589;AN=56;BaseQRankSum=-1.232;DP=694;FS=1.755;HRun=0;HaplotypeScore=227.3670;InbreedingCoeff=0.6683;MQ=58.32;MQ0=7;MQRankSum=-5.187;QD=10.42;ReadPosRankSum=-0.124;VQSLOD=3.5866;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:20,18:39:8.52:42,9,0	1/1:4,11:16:6.29:93,6,0	0/0:9,0:6:6.02:0,6,89	0/0:26,0:19:9.03:0,9,141	0/0:11,17:27:2.61:0,3,39	0/1:13,7:23:6.69:145,0,7	1/1:15,12:26:20.88:362,21,0	1/1:27,9:35:32.97:463,33,0	0/0:18,0:20:36.12:0,36,1214	0/0:21,0:35:60.15:0,60,1078	0/0:8,0:15:24.05:0,24,444	0/1:11,21:35:4.06:326,0,4	1/1:7,9:16:11.98:255,12,0	1/1:9,15:26:8.87:177,9,0	0/0:17,0:19:36.05:0,36,1365	1/1:8,10:19:9.03:211,9,0	1/1:14,9:23:9.02:179,9,0	1/1:10,8:18:11.83:242,12,0	0/1:13,0:12:3.76:4,0,96	0/0:16,0:25:36.06:0,36,539	0/0:31,0:44:48.13:0,48,762	1/1:12,7:19:15.03:296,15,0	1/1:7,5:13:2.79:26,3,0	1/1:11,21:33:3:56,3,0	1/1:10,14:27:9.36:118,9,0	1/1:22,13:36:15.08:1079,15,0	0/0:9,0:35:69.66:0,70,1260	1/1:8,3:12:29.91:451,30,0
chr10	30915035	.	GCATGTGTGTATA	G	1487.14	PASS	AB=0.593;AC=7;AF=0.125;AN=56;BaseQRankSum=6.044;DP=726;FS=4.324;HRun=0;HaplotypeScore=260.4366;InbreedingCoeff=0.9235;MQ=51.19;MQ0=10;MQRankSum=-1.811;QD=16.90;ReadPosRankSum=-3.057;VQSLOD=1.9656;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:53.82:0,54,1998	0/0:16,0:16:24.05:0,24,1077	0/0:33,0:6:12.01:0,12,221	0/0:32,0:8:15.05:0,15,310	0/0:20,0:20:27.08:0,27,1090	0/0:20,0:20:30.07:0,30,1303	0/0:29,0:28:62.19:0,62,2406	0/0:35,0:34:78.25:0,78,2158	0/0:30,0:30:84.12:0,84,3316	0/0:29,0:29:72.23:0,72,3002	0/0:19,0:19:45.14:0,45,1480	0/0:37,0:38:55.25:0,55,2160	0/0:29,0:29:66.56:0,67,2443	0/0:34,0:34:66.09:0,66,2384	0/0:33,0:33:87.25:0,87,3516	0/0:32,0:32:81.26:0,81,3312	0/0:29,0:29:54.17:0,54,2070	0/0:20,0:20:42.10:0,42,1769	1/1:2,17:18:47.98:850,48,0	0/1:5,11:15:0:0,0,0	1/1:40,0:39:30.42:411,30,0	0/0:18,0:18:39.09:0,39,1204	0/0:15,0:15:18.06:0,18,947	0/0:30,0:30:41.80:0,42,1781	0/0:20,0:20:21.07:0,21,773	0/0:30,0:30:80.91:0,81,2572	1/1:8,5:13:18:366,18,0	0/0:12,0:12:27.08:0,27,1156
chr10	30915905	.	GA	G	9661.36	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=5.723;DP=667;FS=7.127;HRun=8;HaplotypeScore=79.3911;InbreedingCoeff=0.9972;MQ=82.21;MQ0=0;MQRankSum=0.354;QD=23.45;ReadPosRankSum=4.986;VQSLOD=5.2687;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,26:26:69.11:665,69,0	1/1:0,14:14:42.07:405,42,0	0/0:27,0:27:69.64:0,70,756	0/0:22,1:23:27.81:0,28,525	1/1:2,26:28:69.10:665,69,0	1/1:2,26:28:60.10:579,60,0	1/1:2,20:22:48.08:463,48,0	1/1:2,30:32:86.86:770,87,0	0/0:27,0:27:69.19:0,69,811	0/0:25,0:25:69.19:0,69,811	0/0:26,0:26:75.14:0,75,856	1/1:5,25:30:66.10:636,66,0	1/1:2,21:23:54.08:521,54,0	1/1:2,21:23:54.08:521,54,0	0/0:22,0:23:66.01:0,66,753	1/1:1,17:18:14.89:427,15,0	1/1:4,26:30:63.09:607,63,0	1/1:2,17:19:29.25:441,29,0	0/0:21,0:21:54.07:0,54,597	0/0:28,0:28:75.10:0,75,855	0/0:21,0:21:42.09:0,42,490	1/1:1,19:20:54.08:520,54,0	1/1:4,15:19:50.30:473,50,0	1/1:3,20:23:54.08:521,54,0	1/1:1,17:18:51.08:492,51,0	1/1:1,25:26:75.08:715,75,0	0/0:34,0:34:87.25:0,87,1034	1/1:0,11:13:28.11:242,28,0
chr10	30915952	.	ATTAAATAAAAC	A	6212.24	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=11.434;DP=615;FS=3.757;HRun=0;HaplotypeScore=205.8080;InbreedingCoeff=0.9964;MQ=80.77;MQ0=0;MQRankSum=-12.013;QD=62.75;ReadPosRankSum=0.301;VQSLOD=4.6690;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:96.33:0,96,5342	0/0:11,0:11:33.09:0,33,1537	0/0:17,0:17:42.14:0,42,2031	0/0:17,0:17:42.14:0,42,1834	0/0:22,0:22:66.23:0,66,3335	0/0:24,0:24:57.20:0,57,3010	0/0:30,0:30:81.28:0,81,4475	0/0:24,0:24:60.18:0,60,2935	0/0:24,0:24:72.25:0,72,3813	0/0:29,0:29:84.28:0,84,4578	0/0:21,0:21:60.19:0,60,3141	0/0:26,0:26:66.23:0,66,3635	0/0:18,0:18:51.18:0,51,2697	0/0:16,0:16:45.15:0,45,2411	0/0:17,0:17:48.16:0,48,2643	0/0:9,0:9:21.06:0,21,1059	0/0:27,0:27:72.22:0,72,3781	0/0:20,0:20:57.18:0,57,2984	1/1:6,17:23:45.99:1368,46,0	1/1:3,23:26:60.17:1991,60,0	1/1:10,14:24:17.89:633,18,0	0/0:18,0:18:51.18:0,51,2613	0/0:18,0:18:54.19:0,54,2998	0/0:19,0:19:48.16:0,48,2518	0/0:27,0:27:78.27:0,78,4313	0/0:26,0:26:72.21:0,72,3535	1/1:2,24:26:63.22:2221,63,0	0/0:19,0:19:51.18:0,51,2875
chr10	30916928	.	CA	C	3546.54	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=10.658;DP=669;FS=2.404;HRun=2;HaplotypeScore=65.3097;InbreedingCoeff=0.9988;MQ=71.41;MQ0=0;MQRankSum=-1.828;QD=35.47;ReadPosRankSum=0.706;VQSLOD=4.0717;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:66.22:0,66,989	0/0:9,0:9:27.09:0,27,405	0/0:18,0:17:48.14:0,48,695	0/0:10,0:9:24.03:0,24,306	0/0:33,0:33:93.25:0,93,1348	0/0:31,0:31:87.29:0,87,1304	0/0:9,0:9:27.05:0,27,380	0/0:30,0:30:81.26:0,81,1180	0/0:20,0:20:54.18:0,54,809	0/0:30,0:29:87.29:0,87,1304	0/0:28,0:28:84.28:0,84,1259	0/0:27,0:27:81.27:0,81,1208	0/0:24,0:24:72.24:0,72,1078	0/0:19,0:19:54.18:0,54,807	0/0:30,0:30:87.27:0,87,1264	0/0:31,0:31:93.31:0,93,1391	0/0:25,0:25:72.24:0,72,1079	0/0:16,0:16:48.16:0,48,718	1/1:1,21:22:66.18:820,66,0	1/1:0,29:29:84.27:1090,84,0	1/1:0,17:17:39.13:507,39,0	0/0:28,0:28:84.27:0,84,1239	0/0:32,0:32:93.29:0,93,1354	0/0:24,0:24:72.24:0,72,1076	0/0:27,0:27:81.27:0,81,1212	0/0:28,0:28:84.28:0,84,1259	1/1:0,32:32:87.28:1129,87,0	0/0:17,0:17:51.16:0,51,743
chr10	30917397	.	CA	C	487.28	PASS	AB=0.834;AC=10;AF=0.179;AN=56;BaseQRankSum=0.143;DP=412;FS=0.000;HRun=1;HaplotypeScore=76.9089;InbreedingCoeff=-0.2355;MQ=50.57;MQ0=24;MQRankSum=-3.930;QD=4.47;ReadPosRankSum=-1.601;VQSLOD=-0.2807;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:14,6:20:99:169,0,183	0/0:8,0:8:10.83:0,11,181	0/0:13,0:4:12.01:0,12,121	0/0:22,0:7:21.05:0,21,247	0/1:12,2:13:18.48:18,0,207	0/0:15,0:15:8.72:0,9,72	0/0:30,0:28:17.57:0,18,234	0/1:11,5:14:99:169,0,183	0/1:10,1:11:13.71:14,0,319	0/0:12,0:11:27.97:0,28,397	0/0:6,0:6:8.01:0,8,112	0/1:11,0:10:33.46:33,0,40	0/1:6,2:8:65.86:66,0,97	0/0:14,0:13:22.57:0,23,256	0/0:8,0:8:14.77:0,15,154	0/1:13,0:12:30.97:31,0,39	0/0:23,1:23:31.06:0,31,477	0/0:16,0:13:23.34:0,23,275	0/0:21,0:21:5.70:0,6,170	0/0:18,0:18:21.57:0,22,243	0/0:27,0:24:16.59:0,17,209	0/1:4,2:6:64.63:65,0,108	0/1:3,1:4:31.18:31,0,62	0/0:20,0:20:30.95:0,31,334	0/0:16,0:16:18.67:0,19,285	0/0:13,0:13:17.14:0,17,234	0/0:20,0:19:37.47:0,37,301	0/1:3,3:5:34.52:35,0,84
chr10	30917398	.	A	ACAC	1617.28	PASS	AB=0.870;AC=35;AF=0.625;AN=56;BaseQRankSum=-4.822;DP=409;FS=15.077;HRun=0;HaplotypeScore=98.6561;InbreedingCoeff=0.4199;MQ=50.83;MQ0=24;MQRankSum=3.469;QD=5.52;ReadPosRankSum=0.765;VQSLOD=1.3432;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:20:16.93:206,17,0	1/1:5,0:8:3.22:13,3,0	0/0:13,0:4:12.03:0,12,129	0/0:20,0:8:18.04:0,18,208	1/1:12,0:11:5.05:46,5,0	1/1:7,7:17:6.02:119,6,0	0/1:13,0:30:7.10:7,0,29	1/1:15,0:13:15.05:200,15,0	0/1:11,0:11:22.30:22,0,178	0/0:12,0:11:6.02:0,6,73	0/0:6,0:6:2.70:0,3,36	1/1:3,1:10:11.77:156,12,0	1/1:7,0:7:9.50:135,10,0	1/1:9,0:12:3.01:58,3,0	0/0:6,0:6:6.02:0,6,73	1/1:5,6:13:2.44:113,2,0	0/1:16,10:25:51.73:87,0,52	1/1:9,4:12:11.07:183,11,0	0/0:13,0:21:14.40:0,14,93	0/0:10,0:18:17.48:0,17,114	0/1:25,0:22:0:0,0,0	1/1:6,0:6:6.02:80,6,0	1/1:4,0:4:3.48:41,3,0	1/1:12,8:23:13.96:206,14,0	1/1:11,5:17:4.84:62,5,0	1/1:8,0:11:3.47:26,3,0	0/0:7,0:19:29.76:0,30,210	0/1:6,0:5:34.03:36,0,34
chr10	30917400	.	ACCACCACCACCACCACCAC	A	3138.97	PASS	AB=0.943;AC=9;AF=0.161;AN=56;BaseQRankSum=6.183;DP=385;FS=4.790;HRun=0;HaplotypeScore=148.1237;InbreedingCoeff=0.3114;MQ=51.22;MQ0=24;MQRankSum=-3.285;QD=28.28;ReadPosRankSum=3.741;VQSLOD=2.5105;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:17,0:18:10.01:10,0,1626	0/0:8,0:8:15:0,15,544	0/0:15,0:5:12.03:0,12,519	0/0:20,0:8:24.08:0,24,1675	0/1:13,0:12:15.27:15,0,835	0/0:16,0:16:15.43:0,15,794	0/0:32,0:30:33.01:0,33,1519	0/0:13,0:12:25.34:0,25,1766	0/0:11,0:11:33.11:0,33,2035	0/0:12,0:11:26.90:0,27,1659	0/1:5,0:5:16.44:16,0,251	0/0:10,0:9:15.01:0,15,1214	0/0:8,0:8:15.52:0,16,1016	0/0:10,0:9:18.06:0,18,740	0/0:6,0:6:15.48:0,15,992	0/0:12,0:11:18.06:0,18,1308	0/0:25,0:24:33.09:0,33,1950	0/0:14,0:11:19.29:0,19,1082	1/1:20,0:20:27.56:961,28,0	0/1:16,0:16:38.28:816,0,38	0/1:14,6:17:23.98:41,0,24	0/0:4,0:4:9.02:0,9,469	0/0:3,0:3:9.01:0,9,523	0/0:19,0:19:29.45:0,29,1895	0/0:17,0:17:32.73:0,33,1487	0/0:11,0:11:19.38:0,19,661	1/1:17,1:17:32.78:1430,33,0	0/0:7,0:6:15.05:0,15,1011
chr10	30918281	.	GATGA	G	1157.28	PASS	AB=0.974;AC=6;AF=0.107;AN=56;BaseQRankSum=5.239;DP=601;FS=16.232;HRun=0;HaplotypeScore=100.8697;InbreedingCoeff=0.6050;MQ=68.88;MQ0=3;MQRankSum=2.436;QD=12.31;ReadPosRankSum=0.556;VQSLOD=2.1976;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:45.13:0,45,976	0/0:11,0:11:18.05:0,18,367	0/0:23,0:17:18.04:0,18,344	0/0:19,0:12:13.86:0,14,253	0/0:21,0:20:45.15:0,45,1022	0/0:24,0:23:54.17:0,54,1217	0/1:17,1:18:18.36:18,0,553	0/0:24,0:24:39.13:0,39,784	0/0:8,0:17:21.05:0,21,314	1/1:6,14:21:45.15:705,45,0	1/1:7,15:22:36.08:553,36,0	0/0:18,0:18:27.09:0,27,652	0/0:26,0:26:66.21:0,66,1528	0/0:20,0:20:45.15:0,45,1056	0/0:12,0:29:36.09:0,36,550	0/0:18,0:18:42.14:0,42,1003	0/0:26,1:27:8.69:0,9,1123	0/0:22,0:22:48.13:0,48,1095	0/0:17,0:17:35.17:0,35,504	0/0:27,0:27:60.21:0,60,1340	0/0:18,0:17:36.12:0,36,811	0/0:22,0:22:45.15:0,45,1086	0/0:20,0:20:48.06:0,48,1007	0/0:22,0:22:45.14:0,45,962	0/0:12,0:12:30.09:0,30,677	0/1:33,0:33:16.76:17,0,1645	0/0:40,0:40:99:0,99,2216	0/0:10,0:10:30.10:0,30,671
chr10	30921767	.	GT	G	6922.35	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=1.901;DP=567;FS=2.743;HRun=9;HaplotypeScore=194.1914;InbreedingCoeff=0.9366;MQ=60.78;MQ0=5;MQRankSum=-8.751;QD=19.55;ReadPosRankSum=1.868;VQSLOD=2.9894;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,21:22:42.01:378,42,0	1/1:2,3:5:9:81,9,0	0/0:25,0:16:10.77:0,11,215	0/0:25,0:12:9.49:0,9,98	1/1:2,32:34:84.02:761,84,0	1/1:1,12:12:30.01:272,30,0	1/1:2,14:16:39.01:351,39,0	1/1:7,25:30:37.39:569,37,0	0/0:17,0:17:42.08:0,42,461	0/0:6,0:23:51.59:0,52,252	0/0:4,0:20:44.90:0,45,239	1/1:1,20:20:51.02:461,51,0	1/1:0,12:12:33.01:296,33,0	1/1:0,17:17:42:379,42,0	0/0:15,0:15:35.30:0,35,414	1/1:2,15:17:45.02:409,45,0	1/1:6,23:28:29.21:411,29,0	1/1:1,14:15:39.01:356,39,0	0/0:21,0:21:57.01:0,57,543	0/0:24,0:23:59.94:0,60,543	0/0:14,0:13:8.97:0,9,78	1/1:1,18:17:45.02:407,45,0	1/1:23,1:22:43.93:253,44,0	1/1:4,20:23:1.53:260,2,0	1/1:3,14:17:39.01:353,39,0	1/1:1,23:24:69.03:625,69,0	0/0:27,0:25:61.57:0,62,548	1/1:0,11:11:33.02:301,33,0
chr10	30921776	.	TG	T	2294.65	PASS	AB=1.000;AC=32;AF=0.571;AN=56;BaseQRankSum=3.946;DP=569;FS=7.204;HRun=1;HaplotypeScore=217.7798;InbreedingCoeff=0.3151;MQ=52.94;MQ0=8;MQRankSum=-5.681;QD=5.35;ReadPosRankSum=5.591;VQSLOD=0.3927;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:23:46:74,0,46	0/1:4,0:4:7.85:11,0,8	0/0:29,0:13:23.75:0,24,177	0/1:25,0:10:7.04:7,0,37	1/1:33,0:33:33.65:243,34,0	0/1:15,0:14:0.92:69,0,1	0/1:18,0:18:23.78:78,0,24	1/1:29,0:26:17.14:104,17,0	0/0:16,0:16:29.86:0,30,351	0/1:20,0:20:18.04:72,0,18	0/1:20,0:19:37.09:67,0,37	1/1:20,0:19:43.65:180,44,0	0/1:15,0:15:1.95:68,0,2	1/1:18,0:18:22.25:126,22,0	0/0:14,3:17:21.86:0,22,352	1/1:18,0:18:10.76:113,11,0	1/1:29,0:26:8.25:118,8,0	1/1:16,0:16:18.25:94,18,0	0/0:19,0:18:35.55:0,36,191	0/0:22,0:21:34.46:0,34,177	0/0:10,0:9:4.12:0,4,27	1/1:19,0:17:25.24:133,25,0	1/1:5,21:23:47.63:562,48,0	0/1:23,0:22:9.17:70,0,9	0/1:18,0:18:24.03:68,0,24	1/1:26,0:25:19.57:144,20,0	0/0:27,0:25:11.96:0,12,126	1/1:12,0:12:25.44:86,25,0
chr10	30921777	.	GTTT	G	1504.91	PASS	AB=1.000;AC=14;AF=0.250;AN=56;BaseQRankSum=-7.317;DP=566;FS=0.459;HRun=14;HaplotypeScore=237.1982;InbreedingCoeff=0.5361;MQ=52.68;MQ0=8;MQRankSum=0.314;QD=8.45;ReadPosRankSum=-1.895;VQSLOD=-0.7187;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:22:0.87:0,1,86	0/0:4,0:4:0.62:0,1,5	0/0:29,0:13:9.49:0,9,110	0/0:25,0:10:10.69:0,11,82	0/0:33,0:33:47.28:0,47,200	0/0:15,0:14:3.37:0,3,38	0/0:18,0:18:17.10:0,17,109	0/1:29,0:26:0.99:1,0,58	0/0:17,0:17:38.93:0,39,530	0/1:20,0:20:6.18:6,0,204	0/0:21,0:20:36.28:0,36,270	0/0:20,0:19:28.64:0,29,108	0/1:15,0:15:10.79:11,0,37	0/0:18,0:18:19.24:0,19,83	0/0:16,0:16:39.11:0,39,674	0/0:19,0:19:19.54:0,20,100	0/0:29,0:26:6.53:0,7,108	0/0:16,0:16:5.53:0,6,55	1/1:7,12:18:35.37:391,35,0	1/1:8,15:21:44.44:485,44,0	1/1:1,7:7:3.01:35,3,0	0/0:19,0:17:17.16:0,17,86	1/1:25,1:23:18.94:125,19,0	0/0:22,0:21:19.90:0,20,79	0/0:17,0:17:19.89:0,20,65	0/0:26,0:25:33.94:0,34,131	1/1:4,22:26:54.13:614,54,0	0/1:12,0:12:0.76:1,0,31
chr10	30922818	.	CA	C	2686	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=12.269;DP=720;FS=2.995;HRun=7;HaplotypeScore=66.4886;InbreedingCoeff=0.9970;MQ=75.37;MQ0=0;MQRankSum=-1.424;QD=25.34;ReadPosRankSum=-0.307;VQSLOD=4.1649;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:93.21:0,93,1099	0/0:19,0:19:45.14:0,45,566	0/0:22,0:22:51.10:0,51,570	0/0:10,0:10:17.84:0,18,188	0/0:30,0:30:81.26:0,81,1019	0/0:25,0:25:75.24:0,75,944	0/0:22,0:22:57.18:0,57,717	0/0:28,0:28:75.21:0,75,909	0/0:32,0:32:96.31:0,96,1208	0/0:37,0:37:99:0,102,1252	0/0:15,0:15:36.12:0,36,453	0/0:18,0:18:48.15:0,48,603	0/0:25,0:25:75.23:0,75,932	0/0:37,0:37:99:0,105,1321	0/0:38,0:38:99:0,108,1357	0/0:26,0:26:69.22:0,69,868	0/0:23,0:23:63.19:0,63,779	0/0:26,0:26:75.24:0,75,944	1/1:1,18:19:51.11:520,51,0	1/1:2,37:39:99:1041,102,0	1/1:2,24:26:66.15:673,66,0	0/0:32,0:32:87.28:0,87,1095	0/0:31,0:31:84.27:0,84,1056	0/0:31,0:31:87.26:0,87,1081	0/0:15,0:15:42.13:0,42,528	0/0:31,0:31:84.24:0,84,1032	1/1:2,20:22:60.14:612,60,0	0/0:8,0:8:24.08:0,24,302
chr10	30923495	.	A	ATCC	30870.17	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-11.435;DP=740;FS=7.553;HRun=0;HaplotypeScore=97.1295;InbreedingCoeff=0.9937;MQ=84.02;MQ0=0;MQRankSum=-8.206;QD=49.00;ReadPosRankSum=3.330;VQSLOD=6.5998;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,37:49:89.74:1911,90,0	1/1:0,11:12:33.11:735,33,0	0/0:30,0:31:80.49:0,80,1221	0/0:19,0:19:45.15:0,45,719	1/1:3,10:13:21.07:469,21,0	1/1:1,14:15:39.13:868,39,0	1/1:6,32:38:87.30:1933,87,0	1/1:3,30:35:96.30:2082,96,0	0/0:27,0:27:66.23:0,66,1075	1/1:2,20:22:60.18:1254,60,0	1/1:7,10:17:24.08:530,24,0	1/1:1,24:28:66.23:1472,66,0	1/1:3,23:27:63.22:1406,63,0	1/1:2,28:31:81.28:1804,81,0	0/0:33,0:32:93.30:0,93,1494	1/1:4,29:34:78.27:1739,78,0	1/1:3,32:36:84.29:1876,84,0	1/1:2,28:31:81.28:1809,81,0	1/1:13,18:31:78.18:1512,78,0	1/1:2,27:29:63.22:1401,63,0	1/1:6,36:44:75.18:1671,75,0	1/1:4,15:19:41.93:885,42,0	1/1:4,10:15:33.11:726,33,0	1/1:5,32:38:81.20:1804,81,0	1/1:4,14:18:36.12:797,36,0	1/1:5,12:19:45.11:917,45,0	1/1:1,15:18:41.79:935,42,0	1/1:1,9:11:15.05:335,15,0
chr10	30923937	.	G	GA	11355.40	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=4.200;DP=630;FS=1.047;HRun=10;HaplotypeScore=95.6223;InbreedingCoeff=0.9322;MQ=80.08;MQ0=0;MQRankSum=-4.849;QD=20.68;ReadPosRankSum=1.361;VQSLOD=5.2788;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,19:24:51.13:544,51,0	1/1:2,11:13:33.04:339,33,0	0/0:20,0:20:32.82:0,33,259	0/0:15,0:14:9.89:0,10,122	1/1:9,23:32:63.11:651,63,0	1/1:3,25:28:66.17:704,66,0	1/1:1,19:20:51.13:544,51,0	1/1:9,21:30:63.13:660,63,0	0/0:27,0:27:71.91:0,72,591	1/1:11,0:22:24.75:149,25,0	1/1:3,1:23:45.86:254,46,0	1/1:2,14:17:38.93:398,39,0	1/1:2,19:21:54.14:575,54,0	1/1:2,14:16:36.09:384,36,0	0/0:19,0:19:50.94:0,51,419	1/1:2,20:22:54.14:576,54,0	1/1:3,19:22:54.14:576,54,0	1/1:2,26:28:75.19:799,75,0	1/1:2,2:26:69.31:363,69,0	1/1:7,0:34:79.98:414,80,0	1/1:2,1:15:31.31:157,31,0	1/1:5,17:22:2.13:431,2,0	1/1:3,20:23:32.49:544,32,0	1/1:7,10:17:36.09:384,36,0	1/1:5,24:29:66.17:704,66,0	1/1:3,14:17:39.10:416,39,0	1/1:5,0:30:62.69:319,63,0	1/1:2,15:17:45.09:470,45,0
chr10	30924795	.	GAAA	G	11259.18	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-6.334;DP=508;FS=0.579;HRun=12;HaplotypeScore=89.4054;InbreedingCoeff=0.9745;MQ=69.38;MQ0=2;MQRankSum=-2.920;QD=30.02;ReadPosRankSum=3.113;VQSLOD=4.4322;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,16:19:43.70:566,44,0	1/1:0,5:5:15.05:190,15,0	0/0:11,0:10:15.52:0,16,239	0/0:13,0:11:7.05:0,7,65	1/1:2,19:21:50.80:614,51,0	1/1:2,19:21:57.15:717,57,0	1/1:1,13:14:36.11:455,36,0	1/1:7,25:32:72.16:896,72,0	0/0:16,0:16:45.15:0,45,888	1/1:2,16:18:45.13:568,45,0	1/1:3,20:23:48.10:606,48,0	1/1:0,13:13:36.11:450,36,0	1/1:1,15:16:42.13:530,42,0	1/1:1,14:15:42.13:531,42,0	0/0:15,0:16:48.10:0,48,860	1/1:2,16:18:42.13:528,42,0	1/1:2,23:26:55.89:718,56,0	1/1:2,18:20:48.14:606,48,0	0/0:4,0:18:16.67:0,17,36	0/0:7,0:27:33.62:0,34,142	0/0:1,0:13:14.59:0,15,32	1/1:6,14:20:33.03:414,33,0	1/1:2,17:19:45.13:567,45,0	1/1:1,12:13:24.06:303,24,0	1/1:0,21:21:51.15:642,51,0	1/1:3,21:24:58.76:752,59,0	0/0:3,0:19:22.18:0,22,82	1/1:0,16:16:48.15:606,48,0
chr10	30925095	.	GGT	G	4341.87	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-0.434;DP=458;FS=2.304;HRun=0;HaplotypeScore=56.8110;InbreedingCoeff=0.8485;MQ=69.70;MQ0=8;MQRankSum=-1.309;QD=14.19;ReadPosRankSum=0.297;VQSLOD=3.9465;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:15:20.69:224,21,0	1/1:9,0:9:26.95:221,27,0	0/0:24,0:13:25.80:0,26,275	0/0:24,0:12:9.85:0,10,112	1/1:20,0:20:41.93:344,42,0	1/1:1,13:14:3.01:38,3,0	1/1:0,7:7:6.02:89,6,0	1/1:20,0:20:56.53:484,57,0	0/0:15,0:15:36.65:0,37,302	1/1:14,0:14:40.72:341,41,0	1/1:2,0:14:5.95:46,6,0	1/1:6,1:7:18:172,18,0	1/1:0,15:15:6.02:90,6,0	1/1:1,9:10:6.02:89,6,0	0/0:22,0:22:41.30:0,41,480	1/1:1,21:22:6.02:90,6,0	1/1:2,22:25:17.74:194,18,0	1/1:15,1:17:44.11:342,44,0	0/0:17,0:17:50.91:0,51,453	0/0:21,0:21:56.56:0,57,436	0/0:10,0:10:20.90:0,21,164	1/1:13,0:13:20.47:185,20,0	1/1:14,0:14:29.98:259,30,0	1/1:11,4:14:26:241,26,0	1/1:16,0:16:32.19:271,32,0	1/1:21,0:21:63.04:578,63,0	0/0:19,0:19:45.72:0,46,351	1/1:0,16:16:3.01:45,3,0
chr10	30925097	.	TGAGAGAGA	T	177.31	PASS	AB=0.977;AC=6;AF=0.115;AN=52;BaseQRankSum=1.574;DP=477;FS=4.143;HRun=0;HaplotypeScore=110.0111;InbreedingCoeff=0.2544;MQ=65.12;MQ0=10;MQRankSum=-1.257;QD=2.30;ReadPosRankSum=1.574;VQSLOD=1.8664;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:18.02:0,18,334	0/0:10,0:10:3.01:0,3,61	./.	0/0:22,0:10:0:0,0,0	0/1:20,0:19:19.80:20,0,53	0/0:15,0:15:3.01:0,3,54	0/0:7,0:7:6.02:0,6,140	0/0:22,0:22:8.22:0,8,110	1/1:14,3:16:6.49:148,6,0	0/0:15,0:15:6.01:0,6,100	0/0:14,0:13:3.01:0,3,36	0/0:11,0:11:18.04:0,18,381	0/0:15,0:15:6.02:0,6,146	0/0:9,0:9:6.02:0,6,140	0/0:19,0:21:27.06:0,27,635	0/0:21,0:21:6.02:0,6,141	0/0:28,0:28:24.03:0,24,559	0/0:18,0:18:21.04:0,21,447	0/0:20,0:20:3.48:0,3,37	0/1:20,0:21:18.94:34,0,19	./.	0/0:14,0:13:9.03:0,9,145	0/0:16,0:16:6:0,6,60	0/0:18,0:17:12.02:0,12,245	0/0:15,0:15:15.03:0,15,239	0/0:22,0:22:21.06:0,21,413	1/1:18,1:19:5.93:90,6,0	0/0:16,0:16:3.01:0,3,70
chr10	30925341	.	ATGTGTG	A	816.31	PASS	AB=0.930;AC=12;AF=0.214;AN=56;BaseQRankSum=4.607;DP=744;FS=3.200;HRun=0;HaplotypeScore=221.2204;InbreedingCoeff=0.0824;MQ=51.07;MQ0=29;MQRankSum=-4.089;QD=3.39;ReadPosRankSum=-2.107;VQSLOD=2.0782;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:13.98:0,14,183	0/0:6,0:6:11.78:0,12,152	0/0:39,0:23:6.02:0,6,98	0/0:48,0:29:6.01:0,6,72	0/0:24,0:22:8.62:0,9,135	0/1:21,0:21:11:11,0,120	0/0:23,0:22:9.16:0,9,101	0/0:51,0:51:54.71:0,55,601	0/0:29,0:30:63.19:0,63,1567	0/0:26,0:26:22.14:0,22,408	0/0:13,0:13:12.49:0,12,166	0/1:25,0:26:13.37:13,0,217	0/1:24,0:23:3.11:3,0,155	0/0:32,0:30:23.76:0,24,237	0/0:34,0:37:54.67:0,55,1676	0/1:24,0:23:21.21:21,0,42	0/0:26,0:26:8.03:0,8,269	0/1:11,0:11:4.05:4,0,121	1/1:11,7:18:21.26:402,21,0	0/1:13,10:22:24.39:30,0,24	0/1:37,16:49:11.10:11,0,14	0/0:23,0:23:12.01:0,12,192	0/0:19,0:19:2.98:0,3,50	0/0:32,0:32:23.39:0,23,389	0/0:16,0:15:14.04:0,14,157	0/0:28,0:26:20.58:0,21,443	1/1:7,18:24:4.11:406,4,0	0/1:12,0:12:48.11:60,0,48
chr10	30925381	.	GTCTGTCTGTC	G	4894.79	PASS	AB=0.958;AC=23;AF=0.411;AN=56;BaseQRankSum=9.862;DP=623;FS=0.450;HRun=0;HaplotypeScore=212.6993;InbreedingCoeff=0.2610;MQ=46.44;MQ0=28;MQRankSum=-4.198;QD=14.48;ReadPosRankSum=0.361;VQSLOD=3.8329;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:2.80:0,3,14	0/1:7,0:7:1.73:235,0,2	0/0:6,0:5:12.03:0,12,321	0/0:5,0:4:6.01:0,6,130	0/0:21,0:18:2.73:0,3,17	0/1:23,1:24:5.11:183,0,5	0/1:21,0:18:8.07:78,0,8	1/1:40,0:36:50.96:648,51,0	0/0:26,0:25:72.21:0,72,2828	1/1:17,1:18:7.87:581,8,0	0/1:9,1:10:10.72:19,0,11	1/1:23,4:27:53.13:914,53,0	1/1:13,1:14:13.18:386,13,0	0/1:22,3:24:6.25:50,0,6	0/0:36,0:34:83.96:0,84,3192	1/1:24,1:24:4.96:151,5,0	0/1:20,2:22:3.80:283,0,4	0/1:8,1:9:40.33:189,0,40	0/0:21,0:20:40.49:0,40,1304	0/0:27,0:25:11.51:0,12,923	0/0:55,0:49:63.52:0,64,2068	0/0:20,2:21:5.85:0,6,104	0/1:13,0:13:0.04:1,0,0	0/1:25,1:26:31.03:122,0,31	0/1:13,0:12:1.25:213,0,1	0/1:30,0:27:56.15:520,0,56	0/0:34,0:32:53.46:0,53,1648	1/1:10,2:11:12.04:322,12,0
chr10	30925391	.	CTG	C	1149.46	PASS	AB=0.895;AC=23;AF=0.411;AN=56;BaseQRankSum=9.004;DP=602;FS=11.727;HRun=0;HaplotypeScore=166.7448;InbreedingCoeff=0.0340;MQ=50.80;MQ0=27;MQRankSum=-5.242;QD=3.25;ReadPosRankSum=1.287;VQSLOD=2.2986;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:26:0:0,0,0	1/1:3,3:6:4.91:52,5,0	0/0:11,0:7:20.86:0,21,308	0/0:16,1:11:1.66:0,2,127	0/1:16,3:16:0:0,0,0	0/1:21,3:24:36.78:58,0,37	0/0:21,2:20:5.24:0,5,48	0/1:33,0:28:52.39:52,0,125	0/0:26,0:25:72.25:0,72,1304	0/1:17,1:18:86.32:94,0,86	0/0:7,2:9:2.99:0,3,24	0/1:19,8:27:11.93:300,0,12	0/1:11,3:13:4.59:160,0,5	1/1:20,4:23:5.86:45,6,0	0/0:31,0:29:78.72:0,79,1391	1/1:22,2:23:5:22,5,0	0/1:21,3:24:48.18:155,0,48	0/1:7,1:8:13.15:54,0,13	0/0:21,0:19:50.24:0,50,737	0/0:26,0:25:45.07:0,45,697	0/0:48,0:45:69.05:0,69,1193	0/1:18,3:21:4.95:5,0,52	1/1:9,3:13:0.44:1,0,0	0/1:19,4:23:11.93:122,0,12	0/1:11,2:12:12.01:54,0,12	0/1:25,1:23:32.09:32,0,115	0/0:35,1:34:30.26:0,30,1060	1/1:9,2:10:11.77:98,12,0
chr10	30926393	.	C	CT	30650.95	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-12.412;DP=803;FS=3.471;HRun=0;HaplotypeScore=77.7722;InbreedingCoeff=0.9997;MQ=77.96;MQ0=0;MQRankSum=-3.453;QD=44.04;ReadPosRankSum=2.139;VQSLOD=5.3172;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,57:58:99:2589,163,0	1/1:1,11:12:30.10:478,30,0	0/0:12,0:13:33.11:0,33,458	0/0:22,0:22:50.72:0,51,709	1/1:0,25:25:63.21:1007,63,0	1/1:0,33:33:99:1582,99,0	1/1:0,27:27:72.25:1151,72,0	1/1:1,29:31:90.26:1411,90,0	0/0:36,0:36:99:0,108,1475	1/1:3,23:26:72.21:1103,72,0	1/1:0,26:26:75.26:1199,75,0	1/1:0,34:34:93.10:1486,93,0	1/1:0,22:22:54.18:863,54,0	1/1:0,34:34:90.05:1439,90,0	0/0:36,0:36:99:0,108,1493	1/1:0,34:34:90.31:1439,90,0	1/1:1,34:35:90.31:1439,90,0	1/1:1,18:19:51.17:815,51,0	1/1:2,12:14:36.10:530,36,0	1/1:1,26:27:78.27:1245,78,0	1/1:0,53:53:99:2398,151,0	1/1:0,30:30:90.31:1438,90,0	1/1:0,24:24:60.20:959,60,0	1/1:0,46:46:99:1966,123,0	1/1:0,26:26:78.27:1247,78,0	1/1:0,23:23:69.24:1095,69,0	1/1:0,18:18:54.18:863,54,0	1/1:0,19:19:57.19:911,57,0
chr10	30928471	.	T	TATAG	767.74	PASS	AB=0.902;AC=8;AF=0.190;AN=42;BaseQRankSum=-3.877;DP=241;FS=0.000;HRun=0;HaplotypeScore=67.8703;InbreedingCoeff=-0.1646;MQ=62.59;MQ0=28;MQRankSum=-3.484;QD=7.53;ReadPosRankSum=-2.452;VQSLOD=1.0929;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:6:5.38:0,5,59	./.	0/0:31,0:2:0:0,0,0	0/0:58,0:11:7.77:0,8,37	0/0:4,0:4:1.30:0,1,49	0/1:5,2:7:28.38:28,0,143	0/1:4,0:3:31.40:31,0,94	0/1:35,0:33:99:346,0,574	0/0:3,0:3:9.03:0,9,165	./.	./.	./.	0/0:3,0:3:6.02:0,6,103	0/0:3,0:3:6.02:0,6,103	0/0:4,0:4:12.04:0,12,217	0/0:3,0:3:6.02:0,6,103	0/1:13,1:14:99:135,0,112	0/1:18,1:19:99:192,0,153	0/0:1,0:1:0:0,0,0	./.	./.	./.	0/0:1,0:1:3.01:0,3,52	0/0:1,0:1:1.25:0,1,3	0/0:5,9:14:9.03:0,9,155	0/1:5,1:6:62.72:63,0,216	0/1:1,0:1:0:0,0,0	0/1:9,7:15:82.19:82,0,223
chr10	30928515	.	TAG	T	2410.88	PASS	AB=0.769;AC=27;AF=0.675;AN=40;BaseQRankSum=-2.069;DP=218;FS=17.977;HRun=0;HaplotypeScore=67.3971;InbreedingCoeff=0.4761;MQ=99.87;MQ0=10;MQRankSum=-2.625;QD=22.32;ReadPosRankSum=1.045;VQSLOD=2.7020;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,2:4:3.01:38,3,0	./.	0/0:48,0:19:20.32:0,20,209	0/0:55,0:28:13.12:0,13,139	1/1:2,2:4:6.02:76,6,0	1/1:1,4:5:9.03:115,9,0	1/1:2,2:4:3.01:38,3,0	1/1:8,21:29:63.18:787,63,0	0/0:1,0:1:3.01:0,3,50	./.	./.	./.	1/1:2,2:4:6.02:76,6,0	1/1:1,2:3:5.92:76,6,0	0/0:3,0:3:9.03:0,9,151	0/1:2,1:3:32.17:32,0,44	1/1:2,11:13:21.07:263,21,0	1/1:1,13:14:30.09:378,30,0	0/0:1,0:1:2.96:0,3,19	./.	./.	./.	1/1:0,1:1:3.01:38,3,0	./.	1/1:1,3:4:8.93:114,9,0	0/1:1,4:5:3.96:121,0,4	0/1:1,0:1:0:0,0,0	1/1:3,11:14:33.05:396,33,0
chr10	30929099	.	C	CAACACTCGT	53362.68	PASS	AC=46;AF=0.852;AN=54;BaseQRankSum=-4.831;DP=660;FS=3.800;HRun=0;HaplotypeScore=172.7796;InbreedingCoeff=0.9964;MQ=81.02;MQ0=3;MQRankSum=-14.435;QD=95.46;ReadPosRankSum=-0.083;VQSLOD=4.9961;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:26,10:41:57.15:2321,57,0	1/1:4,3:9:20.79:852,21,0	0/0:33,0:33:95.79:0,96,2652	0/0:21,0:21:57.64:0,58,1590	1/1:9,15:26:45.02:1740,45,0	1/1:7,11:23:51.11:2051,51,0	1/1:9,13:24:45.07:1874,45,0	1/1:11,7:20:60.21:2463,60,0	0/0:22,0:22:66.21:0,66,1965	1/1:8,16:27:75.22:3271,75,0	1/1:13,10:26:39.09:1698,39,0	1/1:8,19:29:75.26:3609,75,0	1/1:9,15:27:72.17:3109,72,0	1/1:10,10:23:45.15:2074,45,0	0/0:24,0:24:72.25:0,72,2276	1/1:10,26:37:99:4877,102,0	1/1:8,11:20:42.14:1933,42,0	1/1:7,6:13:33.11:1551,33,0	1/1:13,4:18:54.19:2226,54,0	1/1:8,11:22:51.05:2082,51,0	1/1:16,12:33:54.61:2347,55,0	1/1:4,14:22:48.08:1978,48,0	1/1:8,14:28:56.78:2409,57,0	1/1:6,3:11:18.02:668,18,0	1/1:9,7:20:42.10:1705,42,0	1/1:12,17:31:87.27:3711,87,0	1/1:11,13:24:60.12:2815,60,0	./.
chr10	30929910	.	AAG	A	398.07	PASS	AB=1.000;AC=6;AF=0.107;AN=56;BaseQRankSum=-1.694;DP=511;FS=18.808;HRun=0;HaplotypeScore=113.4331;InbreedingCoeff=0.6018;MQ=63.02;MQ0=5;MQRankSum=0.703;QD=9.71;ReadPosRankSum=-5.221;VQSLOD=0.8424;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:75.83:0,76,341	0/1:5,0:5:10.47:10,0,18	0/0:27,0:12:31.05:0,31,203	0/0:19,0:6:17.91:0,18,203	0/0:27,0:27:45.12:0,45,203	0/0:17,0:17:32.30:0,32,113	0/0:21,0:21:32.12:0,32,126	0/0:23,0:23:3.07:0,3,82	0/0:27,0:27:75.10:0,75,1023	1/1:0,12:12:32.83:251,33,0	1/1:4,9:13:26.90:262,27,0	0/0:13,0:13:23.85:0,24,91	0/0:16,0:16:28.83:0,29,96	0/0:16,0:16:21.60:0,22,95	0/0:12,0:12:30.77:0,31,337	0/0:14,0:14:18.26:0,18,86	0/0:30,0:30:46.82:0,47,186	0/0:26,0:26:46.59:0,47,190	0/0:20,0:20:31.63:0,32,550	0/0:16,0:16:40.30:0,40,536	0/0:16,0:16:46.86:0,47,587	0/0:11,0:11:12.77:0,13,109	0/0:10,0:10:3.94:0,4,39	0/0:15,0:15:30.68:0,31,99	0/0:18,0:18:18.22:0,18,82	0/0:19,0:19:24.02:0,24,122	0/0:21,0:21:61.11:0,61,742	0/1:11,0:11:1.09:1,0,27
chr10	30929912	.	GA	G	5436.64	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=11.803;DP=504;FS=2.507;HRun=10;HaplotypeScore=86.2491;InbreedingCoeff=0.9417;MQ=63.42;MQ0=4;MQRankSum=-1.132;QD=16.23;ReadPosRankSum=5.454;VQSLOD=5.3814;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,31:35:47.79:642,48,0	1/1:0,5:5:15:130,15,0	0/0:26,0:12:20.45:0,20,211	0/0:16,0:6:17.96:0,18,172	1/1:5,20:25:53.80:450,54,0	1/1:1,17:18:38.99:338,39,0	1/1:1,19:20:35.84:295,36,0	1/1:3,20:23:47.66:401,48,0	0/0:28,0:28:78.04:0,78,814	0/0:12,0:12:1.70:0,2,4	1/1:13,0:13:7.28:26,7,0	1/1:1,12:13:26.99:234,27,0	1/1:1,15:16:32.99:287,33,0	1/1:2,14:16:20.99:180,21,0	0/0:11,0:11:18.52:0,19,200	1/1:3,10:13:17.99:156,18,0	1/1:4,25:29:59.98:521,60,0	1/1:3,24:27:47.98:417,48,0	0/0:20,1:21:28.09:0,28,537	0/0:16,0:16:42.11:0,42,461	0/0:17,0:17:32.32:0,32,434	1/1:3,7:10:14.48:113,14,0	1/1:1,7:9:11.03:84,11,0	1/1:0,15:15:38.99:339,39,0	1/1:1,17:18:29.92:251,30,0	1/1:3,16:19:47.96:416,48,0	0/0:22,0:22:60.06:0,60,638	1/1:2,9:11:18.02:156,18,0
chr10	30930175	.	ACC	A	8168.08	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-3.821;DP=466;FS=0.835;HRun=9;HaplotypeScore=71.2595;InbreedingCoeff=0.9939;MQ=85.67;MQ0=1;MQRankSum=-3.613;QD=28.17;ReadPosRankSum=6.249;VQSLOD=4.7076;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,27:31:75.21:872,75,0	1/1:0,10:10:24.07:279,24,0	0/0:16,0:16:38.96:0,39,588	0/0:21,0:20:45.13:0,45,624	1/1:2,23:24:63.17:734,63,0	1/1:0,14:14:42.12:489,42,0	1/1:2,15:17:36.10:419,36,0	1/1:2,10:12:30.09:349,30,0	0/0:20,0:20:57.19:0,57,933	0/0:1,0:16:36.12:0,36,130	0/0:2,0:9:17.57:0,18,63	1/1:2,6:8:18.05:210,18,0	1/1:1,19:19:48.14:559,48,0	1/1:5,10:14:30.08:349,30,0	0/0:22,0:22:57.19:0,57,934	1/1:1,14:15:42.12:489,42,0	1/1:5,16:21:45.12:524,45,0	1/1:3,19:22:54.15:629,54,0	0/0:1,0:13:36.06:0,36,361	0/0:5,0:13:24.04:0,24,256	0/0:8,0:27:39.03:0,39,386	1/1:0,12:12:36.11:419,36,0	1/1:1,8:10:15.04:175,15,0	1/1:1,8:9:24.07:280,24,0	1/1:1,15:16:42.12:489,42,0	1/1:6,14:21:36.29:481,36,0	0/0:6,0:19:40.30:0,40,390	1/1:0,12:12:36.11:420,36,0
chr10	30930257	.	GGGT	G	1756.25	PASS	AB=1.000;AC=35;AF=0.625;AN=56;BaseQRankSum=4.420;DP=294;FS=1.887;HRun=0;HaplotypeScore=57.6442;InbreedingCoeff=0.8020;MQ=71.44;MQ0=4;MQRankSum=-5.241;QD=9.65;ReadPosRankSum=-3.168;VQSLOD=2.3869;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:12,2:14:26.25:205,26,0	1/1:4,1:5:5.85:64,6,0	0/0:20,0:11:30.05:0,30,470	0/0:24,0:15:17.50:0,18,527	1/1:15,0:15:23.58:169,24,0	0/1:9,0:9:14.30:37,0,14	1/1:16,2:17:28.70:224,29,0	1/1:14,0:12:17.53:106,18,0	0/0:6,0:6:18.06:0,18,363	0/0:7,0:7:12.02:0,12,142	0/0:13,0:13:27.09:0,27,338	1/1:9,0:9:11.31:64,11,0	1/1:11,0:10:8.58:55,9,0	1/1:7,0:7:14.52:99,15,0	0/0:9,0:6:17.95:0,18,285	1/1:8,0:8:14.49:89,14,0	1/1:13,0:9:11.56:65,12,0	1/1:17,2:19:40.73:317,41,0	0/0:5,0:5:15.04:0,15,274	0/0:4,0:4:11.97:0,12,204	0/0:14,0:14:32.54:0,33,722	1/1:5,0:4:5.92:41,6,0	1/1:6,0:6:8.89:59,9,0	1/1:3,2:4:5.74:64,6,0	1/1:11,0:10:23.48:211,23,0	1/1:11,0:11:11.43:79,11,0	0/0:10,0:8:30.10:0,30,617	1/1:2,0:2:2.96:19,3,0
chr10	30930258	.	GGT	G	3094.38	PASS	AB=0.727;AC=35;AF=0.625;AN=56;BaseQRankSum=2.274;DP=285;FS=1.169;HRun=0;HaplotypeScore=46.3001;InbreedingCoeff=0.8092;MQ=71.62;MQ0=4;MQRankSum=-6.893;QD=17.99;ReadPosRankSum=-2.943;VQSLOD=2.7977;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,5:12:26.76:255,27,0	1/1:2,2:4:6.01:71,6,0	0/0:20,0:11:30.04:0,30,389	0/0:25,0:15:7.14:0,7,419	1/1:10,5:15:23.97:272,24,0	0/1:5,3:8:10.99:97,0,11	1/1:3,15:17:32.99:427,33,0	1/1:3,11:12:17.87:167,18,0	0/0:6,0:6:18.06:0,18,290	0/0:7,0:7:11.97:0,12,103	0/0:12,0:12:26.96:0,27,222	1/1:3,6:9:15:192,15,0	1/1:7,2:8:11.91:105,12,0	1/1:3,4:7:15.66:191,16,0	0/0:9,0:6:17.95:0,18,237	1/1:3,4:7:15:181,15,0	1/1:5,8:9:14.97:175,15,0	1/1:10,8:18:47.67:505,48,0	0/0:6,0:6:18.03:0,18,246	0/0:4,0:4:11.97:0,12,167	0/0:14,0:14:37.01:0,37,589	1/1:2,3:4:6:68,6,0	1/1:4,1:5:8.94:85,9,0	1/1:3,2:4:5.97:71,6,0	1/1:7,4:10:23.98:274,24,0	1/1:8,3:11:14.93:151,15,0	0/0:10,0:8:30.10:0,30,494	1/1:1,0:1:2.96:19,3,0
chr10	30930259	.	GT	G	2042.25	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=4.030;DP=283;FS=0.552;HRun=1;HaplotypeScore=46.5286;InbreedingCoeff=0.8617;MQ=71.70;MQ0=4;MQRankSum=-5.501;QD=12.01;ReadPosRankSum=-3.165;VQSLOD=0.8051;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:13:26.91:196,27,0	1/1:4,0:4:5.96:43,6,0	0/0:20,0:11:29.87:0,30,315	0/0:25,0:15:19.65:0,20,327	1/1:14,0:14:23.92:196,24,0	1/1:8,0:8:2.74:57,3,0	1/1:17,1:17:32.79:254,33,0	1/1:14,0:12:17.82:123,18,0	0/0:7,0:7:18.03:0,18,224	0/0:6,0:6:11.38:0,11,66	0/0:12,0:12:25.02:0,25,112	1/1:9,0:9:14.92:113,15,0	1/1:8,1:8:11.89:84,12,0	1/1:7,0:7:16.05:126,16,0	0/0:9,0:6:17.95:0,18,192	1/1:6,0:6:14.93:115,15,0	1/1:10,2:8:14.91:109,15,0	1/1:16,2:18:47.73:369,48,0	0/0:6,0:6:18.02:0,18,201	0/0:4,0:4:11.97:0,12,134	0/0:14,0:14:38.78:0,39,462	1/1:5,0:4:5.98:46,6,0	1/1:4,1:5:8.92:63,9,0	1/1:5,0:4:5.92:43,6,0	1/1:8,3:10:23.86:180,24,0	1/1:11,0:11:14.60:118,15,0	0/0:10,0:8:30.10:0,30,379	1/1:1,0:1:2.96:19,3,0
chr10	30930260	.	T	TG	339.89	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=-2.043;DP=284;FS=7.317;HRun=7;HaplotypeScore=54.4370;InbreedingCoeff=0.4280;MQ=69.78;MQ0=4;MQRankSum=-0.216;QD=7.39;ReadPosRankSum=-1.185;VQSLOD=-0.0713;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:13,0:13:2.33:2,0,6	0/0:4,0:4:3.85:0,4,11	0/0:19,0:10:17.97:0,18,161	0/0:25,0:15:4.18:0,4,220	0/0:15,0:14:6.14:0,6,17	0/1:7,0:7:2.33:14,0,2	0/0:18,0:17:18.83:0,19,51	0/0:14,0:12:4.09:0,4,11	0/0:7,0:7:18.02:0,18,173	1/1:2,4:6:9.03:109,9,0	1/1:1,11:12:27.08:326,27,0	0/0:9,0:9:6.39:0,6,17	0/0:10,0:9:1.80:0,2,5	0/0:8,0:8:4.09:0,4,12	0/0:9,0:6:12.02:0,12,116	0/0:6,0:6:5.32:0,5,15	0/0:12,0:8:5.43:0,5,15	0/0:18,0:18:17.29:0,17,48	0/0:7,0:7:15.01:0,15,141	0/0:5,0:5:12.02:0,12,115	0/0:14,0:14:37.83:0,38,343	0/0:6,0:4:1.82:0,2,5	0/0:5,0:5:1.81:0,2,5	0/0:5,0:4:3.85:0,4,11	0/0:11,0:10:12.23:0,12,33	0/1:8,0:8:4.18:12,0,4	0/0:10,0:8:30.04:0,30,285	0/0:1,0:1:0.89:0,1,2
chr10	30930305	.	AAGCGCAAGGTCCTGGGT	A	1294.74	PASS	AC=18;AF=0.429;AN=42;BaseQRankSum=5.652;DP=190;FS=1.094;HRun=0;HaplotypeScore=81.1989;InbreedingCoeff=0.6751;MQ=57.07;MQ0=7;MQRankSum=-4.147;QD=27.55;ReadPosRankSum=-0.784;VQSLOD=1.4143;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:5,0:3:9.03:0,9,440	0/0:9,0:7:21.07:0,21,998	1/1:4,3:5:3.01:71,3,0	1/1:2,1:3:3.01:141,3,0	0/0:9,1:8:1.72:0,2,4	./.	0/0:13,0:13:36.12:0,36,2618	0/0:10,0:10:27.09:0,27,2113	0/0:15,0:15:33.11:0,33,2502	./.	1/1:3,4:4:3.01:141,3,0	1/1:3,2:4:3.01:141,3,0	0/0:6,0:5:15.05:0,15,1210	1/1:2,2:4:6.02:215,6,0	./.	1/1:5,2:7:6:165,6,0	0/0:10,0:6:15.05:0,15,889	0/0:12,0:12:21.07:0,21,1700	0/0:16,0:16:30.10:0,30,1999	1/1:1,5:3:6.02:234,6,0	./.	1/1:3,0:2:2.23:48,2,0	1/1:1,4:4:9.03:286,9,0	0/0:4,0:4:3.01:0,3,243	0/0:9,0:7:27.09:0,27,1941	./.
chr10	30930356	.	GGAAAAAAAAAAA	G	8084.73	PASS	AB=0.915;AC=37;AF=0.661;AN=56;BaseQRankSum=7.783;DP=420;FS=0.000;HRun=0;HaplotypeScore=102.3150;InbreedingCoeff=0.5551;MQ=37.62;MQ0=119;MQRankSum=-6.376;QD=29.40;ReadPosRankSum=6.929;VQSLOD=3.1400;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,5:4:5.90:216,6,0	1/1:1,0:1:2.92:17,3,0	0/0:55,0:10:14.28:0,14,447	0/1:47,0:8:1.46:1,0,119	1/1:1,6:7:8.64:284,9,0	1/1:4,8:10:27.09:959,27,0	1/1:3,8:7:21.07:755,21,0	1/1:18,2:16:35.65:393,36,0	0/0:16,0:12:33.06:0,33,1115	0/1:16,0:17:86.54:87,0,1376	0/1:12,0:11:34.56:35,0,717	1/1:1,4:4:9.03:322,9,0	0/1:6,6:8:99:225,0,131	1/1:8,3:5:11.94:255,12,0	0/0:9,0:9:27.09:0,27,1304	1/1:2,4:7:18.01:524,18,0	1/1:3,8:7:18.06:569,18,0	1/1:8,8:15:41.87:1065,42,0	0/0:22,0:15:41.99:0,42,1316	0/0:15,0:15:39.09:0,39,1621	0/0:15,0:14:39.04:0,39,1188	1/1:2,7:7:18.06:648,18,0	1/1:1,7:7:11.89:429,12,0	1/1:2,5:5:8.96:286,9,0	1/1:2,7:9:23.89:653,24,0	1/1:5,1:6:9.75:263,10,0	0/0:13,0:10:21.04:0,21,821	0/1:23,2:4:99:100,0,266
chr10	30931233	.	ACAGTATGATGTCAGCAG	A	2936.33	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=1.409;DP=1021;FS=14.453;HRun=0;HaplotypeScore=653.7517;InbreedingCoeff=0.9914;MQ=64.02;MQ0=0;MQRankSum=0.145;QD=59.93;ReadPosRankSum=0.597;VQSLOD=0.0707;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:43:82.73:0,83,1577	0/0:10,0:10:23.81:0,24,680	0/0:31,0:31:71.34:0,71,2466	0/0:23,0:23:38.09:0,38,1561	0/0:49,0:49:76.06:0,76,1469	0/0:43,0:43:98.24:0,98,1970	0/0:56,0:56:99:0,107,2388	0/0:65,0:65:99:0,160,3136	0/0:28,0:28:75.22:0,75,4304	1/1:8,26:34:71.65:2355,72,0	1/1:2,13:15:18.06:701,18,0	0/0:57,0:57:99:0,138,3192	0/0:47,0:47:99:0,118,2366	0/0:50,0:50:99:0,115,2142	0/0:45,0:45:99:0,117,7120	0/0:47,0:47:99:0,110,2726	0/0:22,0:22:41.06:0,41,611	0/0:10,0:10:27.06:0,27,877	0/0:12,0:12:27.03:0,27,1009	0/0:28,0:28:78.22:0,78,4731	0/0:54,0:54:99:0,153,9576	0/0:50,0:50:99:0,102,1764	0/0:41,0:41:90.64:0,91,1822	0/0:33,0:33:22.05:0,22,460	0/0:42,0:42:97.48:0,97,2448	0/0:46,0:46:99:0,131,3143	0/0:26,0:26:72.12:0,72,3111	0/0:14,0:14:26.89:0,27,638
chr10	30931246	.	AG	A	7758.59	PASS	AB=0.744;AC=20;AF=0.357;AN=56;BaseQRankSum=7.915;DP=1008;FS=11.324;HRun=1;HaplotypeScore=357.6720;InbreedingCoeff=-0.5456;MQ=63.40;MQ0=0;MQRankSum=-13.832;QD=10.36;ReadPosRankSum=-2.502;VQSLOD=1.2431;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:32,13:45:99:362,0,771	0/1:6,4:10:77.39:77,0,213	0/0:34,0:34:93.30:0,93,1415	0/0:28,0:28:70.90:0,71,1183	0/1:28,22:50:99:372,0,669	0/1:27,16:43:99:398,0,932	0/1:37,19:56:99:527,0,931	0/1:29,32:60:99:1125,0,1145	0/0:27,0:27:81.28:0,81,1293	0/1:26,0:26:36.77:37,0,272	0/1:13,0:13:5.40:5,0,24	0/1:31,21:52:99:560,0,1237	0/1:23,21:44:99:522,0,835	0/1:29,23:52:99:585,0,989	0/0:41,0:41:99:0,123,1944	0/1:29,16:45:99:379,0,1166	0/1:10,10:20:99:311,0,195	0/1:7,4:11:99:137,0,257	0/0:13,0:13:39.13:0,39,612	0/0:31,0:31:93.32:0,93,1485	0/0:54,0:54:99:0,163,2564	0/1:31,20:51:99:653,0,685	0/1:23,18:41:99:498,0,724	0/1:18,14:32:97.69:98,0,145	0/1:28,13:41:99:359,0,992	0/1:25,20:45:99:665,0,1017	0/0:31,0:31:93.32:0,93,1462	0/1:8,3:11:86.85:87,0,350
chr10	30932231	.	GA	G	800.94	PASS	AB=0.960;AC=25;AF=0.481;AN=52;BaseQRankSum=7.375;DP=376;FS=0.551;HRun=13;HaplotypeScore=74.7825;InbreedingCoeff=-0.1003;MQ=47.88;MQ0=13;MQRankSum=2.194;QD=3.01;ReadPosRankSum=2.239;VQSLOD=-0.2414;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:19,1:20:2.32:108,0,2	1/1:6,0:6:8.39:43,8,0	./.	./.	0/1:12,1:11:12.29:12,0,15	0/1:16,0:16:9.48:102,0,9	1/1:7,0:8:11.33:56,11,0	0/1:19,0:17:46.94:47,0,51	0/1:9,1:9:6.82:7,0,101	0/0:11,0:10:3.54:0,4,12	0/0:16,0:15:2.57:0,3,8	0/1:15,0:16:52.27:52,0,67	1/1:10,0:11:0.51:31,1,0	0/1:15,0:14:65.67:66,0,76	0/0:20,2:22:19.97:0,20,333	1/1:10,0:10:7.27:40,7,0	0/1:30,0:30:88.89:112,0,89	0/1:21,0:20:47.48:47,0,53	0/0:20,3:23:1.26:0,1,328	0/1:6,2:10:27.20:32,0,27	0/0:8,0:8:15.02:0,15,146	0/0:6,0:6:2.37:0,2,8	1/1:9,1:10:11.42:60,11,0	1/1:14,0:15:19.61:94,20,0	0/1:10,1:11:18.44:18,0,36	0/1:12,0:12:23.23:23,0,46	0/0:17,0:17:24.01:0,24,221	0/1:9,0:8:4.12:4,0,36
chr10	30932243	.	AAG	A	3910.07	PASS	AB=1.000;AC=40;AF=0.714;AN=56;BaseQRankSum=9.780;DP=383;FS=7.238;HRun=0;HaplotypeScore=67.3593;InbreedingCoeff=0.7719;MQ=51.57;MQ0=10;MQRankSum=-0.917;QD=13.53;ReadPosRankSum=-0.061;VQSLOD=2.1182;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:22:29.93:249,30,0	1/1:5,0:5:10.88:88,11,0	0/1:8,0:3:0.90:1,0,19	0/0:7,0:4:5.72:0,6,51	1/1:17,0:14:32.93:183,33,0	1/1:18,0:17:47.54:376,48,0	1/1:9,0:9:11.90:90,12,0	1/1:28,0:25:55.51:369,56,0	0/0:12,0:11:23.66:0,24,245	1/1:10,3:12:28.21:247,28,0	1/1:6,4:10:24.62:229,25,0	1/1:16,2:18:20.83:227,21,0	1/1:12,0:12:14.32:87,14,0	1/1:15,0:14:0.96:153,1,0	0/0:23,0:23:62.89:0,63,744	1/1:10,0:10:10.24:83,10,0	1/1:27,0:26:52.64:412,53,0	1/1:26,0:24:63.05:451,63,0	0/0:23,0:23:65.14:0,65,792	0/0:8,0:8:18.68:0,19,130	0/0:9,0:8:21.04:0,21,270	1/1:3,0:3:5.55:29,6,0	1/1:10,0:10:17.72:142,18,0	1/1:12,0:12:20.92:185,21,0	0/1:9,0:9:8.76:44,0,9	1/1:13,0:13:26.62:196,27,0	0/0:12,0:12:36.06:0,36,456	1/1:4,0:4:10.45:70,10,0
chr10	30932244	.	AG	A	5120.03	PASS	AB=0.786;AC=40;AF=0.714;AN=56;BaseQRankSum=10.473;DP=375;FS=5.443;HRun=1;HaplotypeScore=55.8982;InbreedingCoeff=0.7984;MQ=52.03;MQ0=9;MQRankSum=-1.817;QD=18.35;ReadPosRankSum=0.528;VQSLOD=4.9268;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,19:21:29.58:345,30,0	1/1:0,5:5:11.97:139,12,0	0/1:8,0:3:0.93:1,0,18	0/0:7,0:4:5.87:0,6,50	1/1:12,4:14:35.42:241,35,0	1/1:7,10:16:45.68:495,46,0	1/1:2,7:9:12.04:163,12,0	1/1:21,7:25:60.51:463,61,0	0/0:12,0:11:15.33:0,15,181	1/1:12,1:12:28.20:233,28,0	1/1:10,0:10:26.73:205,27,0	1/1:10,6:16:31.27:323,31,0	1/1:1,10:11:14.53:152,15,0	1/1:10,5:14:28.59:288,29,0	0/0:23,0:23:61.09:0,61,584	1/1:1,9:10:11.97:136,12,0	1/1:14,11:25:52.99:538,53,0	1/1:17,9:24:52.40:533,52,0	0/0:23,0:23:60.61:0,61,614	0/0:8,0:8:8.25:0,8,83	0/0:10,0:9:23.87:0,24,237	1/1:0,3:3:5.55:29,6,0	1/1:1,9:10:17.88:173,18,0	1/1:1,11:12:21.07:281,21,0	0/1:2,6:8:8.70:69,0,9	1/1:8,4:12:27.19:236,27,0	0/0:13,0:13:39.02:0,39,377	1/1:3,1:4:10.36:77,10,0
chr10	30932245	.	GAA	G	5270.46	PASS	AB=0.944;AC=37;AF=0.661;AN=56;BaseQRankSum=6.281;DP=376;FS=6.210;HRun=13;HaplotypeScore=61.0578;InbreedingCoeff=0.6773;MQ=52.14;MQ0=8;MQRankSum=1.952;QD=19.38;ReadPosRankSum=1.283;VQSLOD=4.0524;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:20,2:22:33.03:353,33,0	1/1:5,0:5:11.84:121,12,0	0/0:8,0:3:6:0,6,75	0/0:7,0:4:6.02:0,6,99	1/1:14,2:14:35.59:375,36,0	1/1:16,1:16:48.13:573,48,0	1/1:9,0:9:11.37:95,11,0	1/1:24,2:25:57.31:659,57,0	0/0:12,0:11:21.07:0,21,352	0/1:14,0:13:12.48:12,0,22	0/1:10,0:10:25.97:30,0,26	1/1:15,1:16:9.83:335,10,0	1/1:11,0:11:11.79:97,12,0	0/1:12,3:14:5.60:247,0,6	0/0:23,0:23:63.22:0,63,1102	1/1:11,0:11:14.68:136,15,0	1/1:20,5:25:50.24:635,50,0	1/1:24,1:23:34.57:572,35,0	0/0:23,0:23:66.22:0,66,1145	0/0:8,0:8:20.96:0,21,277	0/0:10,0:9:24.08:0,24,421	1/1:3,0:3:3.01:36,3,0	1/1:9,1:10:17.89:208,18,0	1/1:12,0:12:20.96:224,21,0	1/1:8,0:8:6.01:65,6,0	1/1:11,1:12:30.04:369,30,0	0/0:13,0:13:39.13:0,39,688	1/1:3,1:4:11.40:127,11,0
chr10	30932529	.	A	ATTG	2649.15	PASS	AB=0.787;AC=23;AF=0.426;AN=54;BaseQRankSum=5.888;DP=247;FS=1.124;HRun=0;HaplotypeScore=79.3242;InbreedingCoeff=-0.1927;MQ=51.30;MQ0=1;MQRankSum=-3.428;QD=13.31;ReadPosRankSum=-0.828;VQSLOD=3.0928;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:11,4:15:46.99:245,0,47	0/1:4,1:5:25.50:64,0,26	0/0:3,0:3:0.43:0,0,1	0/0:1,0:2:3:0,3,25	0/1:4,2:6:33.13:33,0,63	0/1:16,5:21:0.10:321,0,0	1/1:2,0:2:5.93:51,6,0	0/1:44,0:44:99:392,0,220	0/0:3,0:3:9.03:0,9,153	0/1:9,1:9:18.98:107,0,19	0/1:2,2:4:9.46:108,0,9	0/1:5,3:8:4.05:188,0,4	0/1:3,4:7:41.19:172,0,41	0/1:3,2:5:23.53:86,0,24	0/0:4,0:4:9.03:0,9,145	1/1:6,0:6:7.17:68,7,0	0/1:16,8:24:38.69:344,0,39	0/1:13,3:16:77.33:157,0,77	0/0:16,0:16:22.99:0,23,315	0/0:2,0:2:3:0,3,25	0/0:11,0:11:26.45:0,26,317	./.	1/1:1,1:2:3.59:11,4,0	1/1:1,0:1:2.99:23,3,0	0/1:6,0:6:17.69:26,0,18	0/1:9,6:15:4.22:363,0,4	0/0:7,0:7:21.04:0,21,258	0/1:1,1:2:16.58:44,0,17
chr10	30932533	.	T	TTAC	3667.45	PASS	AB=0.775;AC=25;AF=0.481;AN=52;BaseQRankSum=1.477;DP=239;FS=7.214;HRun=0;HaplotypeScore=70.2318;InbreedingCoeff=-0.1547;MQ=47.59;MQ0=1;MQRankSum=-4.170;QD=19.00;ReadPosRankSum=2.790;VQSLOD=2.8030;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:10,4:14:99:247,0,155	0/1:3,1:4:65.40:72,0,65	./.	0/0:3,0:3:2.91:0,3,19	0/1:4,2:6:56.65:57,0,77	0/1:16,5:21:44.26:433,0,44	1/1:2,0:2:3:65,3,0	0/1:43,0:43:99:637,0,344	0/0:5,0:5:15.03:0,15,204	0/1:8,1:8:53.03:200,0,53	0/1:1,2:3:35.96:86,0,36	1/1:3,3:6:11.98:170,12,0	0/1:3,4:7:88.57:171,0,89	0/1:3,2:5:52.48:113,0,52	0/0:3,0:3:9.03:0,9,145	1/1:4,0:4:8.94:112,9,0	0/1:17,8:25:99:365,0,169	0/1:14,3:17:99:311,0,162	0/0:16,0:16:25.94:0,26,336	0/0:1,0:1:3:0,3,25	0/0:11,0:11:26.14:0,26,303	./.	1/1:1,1:2:3.90:38,4,0	1/1:2,0:2:2.96:24,3,0	1/1:6,0:6:8.93:98,9,0	0/1:7,6:13:9.97:382,0,10	0/0:6,0:6:18.05:0,18,242	0/1:3,1:4:19.85:85,0,20
chr10	30932539	.	C	CTATTAC	7519.04	PASS	AC=38;AF=0.760;AN=50;BaseQRankSum=2.689;DP=222;FS=0.000;HRun=0;HaplotypeScore=63.1161;InbreedingCoeff=0.7648;MQ=47.27;MQ0=1;MQRankSum=-4.614;QD=42.01;ReadPosRankSum=-0.919;VQSLOD=4.3556;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:13:23.89:532,24,0	1/1:4,0:4:8.96:172,9,0	./.	0/0:3,0:3:2.94:0,3,30	1/1:6,0:6:14.82:179,15,0	1/1:20,0:20:38.78:774,39,0	1/1:1,0:1:3.01:83,3,0	1/1:37,0:37:95.64:1185,96,0	0/0:5,0:5:15:0,15,169	1/1:8,0:7:17.95:314,18,0	1/1:3,0:3:6.02:199,6,0	1/1:4,0:4:12.03:326,12,0	1/1:7,0:7:17.93:435,18,0	1/1:5,0:5:14.90:286,15,0	0/0:3,0:3:6.02:0,6,131	1/1:4,0:4:8.95:176,9,0	1/1:19,4:24:53.63:1069,54,0	1/1:16,0:16:32.91:587,33,0	0/0:15,0:15:36.15:0,36,453	./.	0/0:9,0:9:21.01:0,21,289	./.	1/1:2,0:2:5.93:73,6,0	1/1:1,0:1:2.99:24,3,0	1/1:6,0:6:8.93:118,9,0	1/1:13,0:13:32.83:822,33,0	0/0:5,0:5:12.03:0,12,216	1/1:5,0:5:11.96:167,12,0
chr10	30933941	.	CTTT	C	3778.46	PASS	AB=0.923;AC=35;AF=0.625;AN=56;BaseQRankSum=11.731;DP=326;FS=32.976;HRun=6;HaplotypeScore=85.8786;InbreedingCoeff=0.7989;MQ=51.40;MQ0=0;MQRankSum=-12.762;QD=20.88;ReadPosRankSum=-0.467;VQSLOD=-0.5855;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,2:7:12.30:130,12,0	1/1:3,0:3:5.91:39,6,0	0/0:4,0:2:5.88:0,6,46	0/0:5,0:2:2.97:0,3,20	1/1:12,7:19:50.05:470,50,0	1/1:12,3:14:35.62:316,36,0	1/1:4,1:4:11.77:98,12,0	1/1:10,8:11:20.08:268,20,0	0/0:16,0:16:48.16:0,48,1084	0/0:18,0:18:51.17:0,51,1057	0/0:23,0:23:69.24:0,69,1426	1/1:6,4:10:23.88:268,24,0	1/1:9,5:14:38.64:403,39,0	1/1:6,3:9:20.83:220,21,0	0/0:17,0:17:48.16:0,48,1088	1/1:5,3:8:20.89:223,21,0	1/1:9,4:13:32.73:357,33,0	1/1:10,2:10:11.77:135,12,0	0/0:20,0:20:57.20:0,57,1255	0/0:18,0:18:48.16:0,48,1080	0/0:4,0:4:12.04:0,12,269	1/1:1,0:1:2.98:21,3,0	1/1:5,1:6:9.42:113,9,0	1/1:5,1:6:5.89:63,6,0	1/1:10,3:13:30.35:277,30,0	0/1:11,1:12:99:199,0,105	0/0:20,0:20:60.21:0,60,1323	1/1:6,2:7:20.87:178,21,0
chr10	30933944	.	T	TAA	2837.49	PASS	AB=0.783;AC=33;AF=0.589;AN=56;BaseQRankSum=9.490;DP=307;FS=0.000;HRun=0;HaplotypeScore=79.4499;InbreedingCoeff=0.5517;MQ=52.54;MQ0=0;MQRankSum=-9.940;QD=17.30;ReadPosRankSum=1.734;VQSLOD=3.1132;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,5:6:1.74:90,2,0	1/1:0,2:2:6.02:86,6,0	0/0:4,0:2:5.98:0,6,67	0/0:5,0:2:2.74:0,3,19	1/1:7,11:18:17.25:431,17,0	1/1:3,7:12:16.75:339,17,0	1/1:2,3:4:1.92:57,2,0	0/1:12,0:9:12.39:48,0,12	0/0:16,0:16:48.16:0,48,783	0/0:18,0:18:54.18:0,54,841	0/0:24,0:24:69.24:0,69,1120	1/1:4,4:9:3.43:168,3,0	1/1:5,8:13:6.27:318,6,0	1/1:6,1:9:7.61:102,8,0	0/0:16,0:16:48.16:0,48,782	1/1:3,4:7:1.36:160,1,0	1/1:6,4:13:6.35:217,6,0	1/1:3,4:8:14.95:154,15,0	0/0:19,0:19:57.19:0,57,925	0/0:16,0:16:48.16:0,48,783	0/0:4,0:4:12.04:0,12,196	1/1:0,1:1:2.97:20,3,0	1/1:3,1:4:0.94:51,1,0	0/1:2,4:6:0.12:37,0,0	1/1:3,11:14:21.25:342,21,0	0/1:8,4:12:83.77:178,0,84	0/0:21,0:21:63.20:0,63,997	1/1:2,5:7:14.34:228,14,0
chr10	30933956	.	AG	A	1094.81	PASS	AB=0.976;AC=7;AF=0.125;AN=56;BaseQRankSum=2.745;DP=333;FS=4.301;HRun=1;HaplotypeScore=72.0020;InbreedingCoeff=0.5116;MQ=58.39;MQ0=1;MQRankSum=2.907;QD=18.25;ReadPosRankSum=-1.465;VQSLOD=3.4479;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:9:21.25:0,21,174	0/0:3,0:3:8.91:0,9,75	0/0:6,0:3:6.01:0,6,73	0/0:9,0:5:11.69:0,12,134	0/0:24,0:24:47.16:0,47,480	0/0:15,0:14:36.92:0,37,303	0/1:8,0:7:1.90:2,0,123	0/0:16,0:15:33.38:0,33,320	0/0:16,0:16:48.16:0,48,670	1/1:0,9:9:27.09:376,27,0	1/1:1,22:23:60.98:823,61,0	0/0:9,0:9:26.42:0,26,217	0/0:13,0:12:23.13:0,23,171	0/0:7,0:7:20.74:0,21,146	0/0:16,0:16:48.07:0,48,611	0/0:8,0:8:20.77:0,21,159	0/0:8,0:8:20.63:0,21,129	0/0:9,0:7:14.74:0,15,93	0/0:19,0:19:57.13:0,57,730	0/0:18,0:18:51.14:0,51,676	0/0:4,0:4:12.03:0,12,150	0/1:7,0:7:3.21:3,0,115	0/0:6,0:6:10.87:0,11,113	0/0:7,0:7:8.91:0,9,63	0/0:18,0:18:24.03:0,24,334	0/1:12,1:12:21.88:22,0,185	0/0:19,0:19:57.15:0,57,755	0/0:12,0:12:35.72:0,36,285
chr10	30935964	.	G	GTGT	14324.69	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=4.938;DP=764;FS=0.340;HRun=0;HaplotypeScore=197.1572;InbreedingCoeff=0.9821;MQ=67.26;MQ0=1;MQRankSum=-12.366;QD=26.98;ReadPosRankSum=-0.476;VQSLOD=4.8078;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:17,18:36:56.46:824,56,0	1/1:8,5:13:32.87:484,33,0	0/0:38,0:26:63.14:0,63,882	0/0:26,0:21:47.79:0,48,644	1/1:14,15:29:71.16:1024,71,0	1/1:10,10:20:32.87:573,33,0	1/1:8,14:23:29.79:449,30,0	1/1:15,20:36:75.37:1143,75,0	0/0:24,0:24:51.15:0,51,740	1/1:22,0:21:36.57:471,37,0	1/1:17,0:17:21.05:249,21,0	1/1:11,14:25:35.96:558,36,0	1/1:14,11:26:42.39:688,42,0	1/1:17,18:38:62.95:1035,63,0	0/0:35,0:35:93.31:0,93,1384	1/1:17,12:30:11.03:702,11,0	1/1:17,18:37:28.76:638,29,0	1/1:8,12:20:27.09:484,27,0	0/0:18,0:18:39.11:0,39,554	0/0:24,0:24:66.22:0,66,972	0/0:34,0:34:90.25:0,90,1300	1/1:15,14:29:72.99:1020,73,0	1/1:15,18:35:54.03:960,54,0	1/1:5,11:18:9.03:156,9,0	1/1:15,11:27:50.88:804,51,0	1/1:14,20:35:90.22:1637,90,0	0/0:34,0:34:84.28:0,84,1261	1/1:9,6:15:21.07:427,21,0
chr10	30935974	.	T	TG	1243.72	PASS	AB=0.892;AC=20;AF=0.357;AN=56;BaseQRankSum=15.755;DP=725;FS=2.845;HRun=0;HaplotypeScore=146.0517;InbreedingCoeff=-0.4192;MQ=62.82;MQ0=3;MQRankSum=-7.405;QD=2.63;ReadPosRankSum=7.095;VQSLOD=2.8050;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:32,2:34:21.96:22,0,222	0/1:10,2:12:53.04:53,0,65	0/0:44,0:29:78.48:0,78,1081	0/0:25,0:20:54.01:0,54,709	0/1:24,3:27:47.08:98,0,47	0/1:18,2:20:39.39:39,0,87	0/0:24,0:24:0.61:0,1,127	0/1:35,0:35:99:114,0,195	0/0:19,0:19:57.19:0,57,796	0/1:13,6:18:68.42:123,0,68	0/1:15,3:18:26.65:27,0,159	0/1:25,2:27:30.57:31,0,137	0/1:19,7:26:99:120,0,139	0/1:29,4:33:99:106,0,109	0/0:32,0:32:96.31:0,96,1327	0/1:25,4:29:72.61:73,0,196	0/1:29,5:34:49.30:49,0,221	0/1:18,2:20:51.54:52,0,65	0/0:18,0:17:48.07:0,48,616	0/0:26,0:26:78.26:0,78,1089	0/0:34,0:34:99:0,99,1326	0/1:24,3:27:99:119,0,108	0/1:23,4:27:71.35:93,0,71	0/1:17,1:18:13.79:14,0,31	0/1:22,2:24:14.48:14,0,191	0/1:30,3:33:99:159,0,122	0/0:30,0:30:90.30:0,90,1252	1/1:7,3:10:18.81:102,19,0
chr10	30935975	.	T	TTTTTGTTGTTGTTG	27226.25	PASS	AB=0.817;AC=38;AF=0.679;AN=56;BaseQRankSum=12.370;DP=726;FS=3.095;HRun=0;HaplotypeScore=275.1224;InbreedingCoeff=0.8264;MQ=62.78;MQ0=3;MQRankSum=-12.787;QD=54.67;ReadPosRankSum=2.214;VQSLOD=4.2877;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:33,2:35:60.78:1878,61,0	1/1:10,2:12:32.90:1036,33,0	0/0:44,0:29:84.68:0,85,1072	0/0:26,0:21:28.32:0,28,708	1/1:23,3:26:28.17:1420,28,0	1/1:18,2:20:41.87:1299,42,0	1/1:24,0:24:44.75:885,45,0	1/1:34,0:34:73.03:1124,73,0	0/0:19,0:19:57.17:0,57,1724	0/1:15,0:20:99:390,0,109	0/1:15,0:18:99:207,0,234	1/1:25,2:27:50.83:1462,51,0	1/1:20,7:27:53.86:2060,54,0	1/1:30,4:34:63.22:2057,63,0	0/0:32,0:32:93.29:0,93,2783	1/1:25,4:29:21.15:2074,21,0	1/1:30,4:34:43.57:1628,44,0	1/1:18,2:20:30.64:1245,31,0	0/0:17,0:16:23.12:0,23,708	0/0:27,0:27:78.22:0,78,2005	0/0:33,0:33:96.10:0,96,2884	1/1:24,3:27:46.60:1457,47,0	1/1:22,4:26:55.45:1753,55,0	1/1:17,1:18:9.41:286,9,0	1/1:22,2:24:53.99:2237,54,0	1/1:29,2:32:73.52:2085,74,0	0/0:29,0:30:90.29:0,90,2914	1/1:7,3:10:20.85:643,21,0
chr10	30936484	.	C	CTCCT	2970.24	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.825;DP=795;FS=0.000;HRun=0;HaplotypeScore=130.3928;InbreedingCoeff=0.9802;MQ=86.50;MQ0=0;MQRankSum=-7.990;QD=64.57;ReadPosRankSum=-1.858;VQSLOD=4.7452;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:58:99:0,150,2721	0/0:4,0:4:12.04:0,12,224	0/0:25,0:25:72.21:0,72,1230	0/0:28,0:28:71.45:0,71,1226	0/0:26,0:26:72.25:0,72,1340	0/0:16,0:16:45.15:0,45,838	0/0:28,0:28:84.29:0,84,1549	0/0:27,0:27:69.22:0,69,1225	0/0:46,0:46:99:0,132,2423	1/1:8,22:31:87.28:2195,87,0	1/1:3,12:15:36.08:897,36,0	0/0:28,0:28:84.23:0,84,1435	0/0:20,0:20:60.16:0,60,1054	0/0:39,0:39:99:0,114,2126	0/0:35,0:35:99:0,105,1919	0/0:35,0:35:99:0,99,1845	0/0:30,0:30:87.30:0,87,1613	0/0:23,0:23:66.16:0,66,1161	0/0:18,0:18:54.14:0,54,857	0/0:20,0:20:57.17:0,57,1000	0/0:63,0:63:99:0,181,3320	0/0:26,0:26:75.26:0,75,1400	0/0:18,0:18:51.16:0,51,911	0/0:48,0:46:99:0,135,2470	0/0:21,0:21:54.17:0,54,977	0/0:33,1:34:19.29:0,19,1709	0/0:25,0:25:75.24:0,75,1367	0/0:8,0:8:24.08:0,24,448
chr10	30936881	.	C	CTGAATGAATGAA	30306.01	PASS	AB=0.762;AC=39;AF=0.696;AN=56;BaseQRankSum=-11.272;DP=679;FS=1.856;HRun=0;HaplotypeScore=224.7459;InbreedingCoeff=0.7466;MQ=64.45;MQ0=3;MQRankSum=-14.405;QD=60.73;ReadPosRankSum=-5.551;VQSLOD=3.6841;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:20,9:32:36.12:1812,36,0	1/1:6,2:8:15.05:879,15,0	0/0:22,0:21:15.05:0,15,429	0/1:14,0:13:9.12:9,0,93	1/1:25,6:32:17.98:966,18,0	1/1:28,16:47:69.24:3692,69,0	1/1:18,6:25:30.10:1271,30,0	1/1:44,0:44:54.19:2872,54,0	0/0:25,0:25:60.19:0,60,2001	0/1:9,0:24:30.81:47,0,31	0/1:11,0:20:5.16:5,0,16	1/1:16,10:26:42.14:2427,42,0	1/1:11,8:19:24.08:1387,24,0	1/1:17,15:32:72.20:3781,72,0	0/0:26,0:26:57.20:0,57,1850	1/1:14,8:23:30.10:1656,30,0	1/1:14,1:16:8.99:372,9,0	1/1:11,4:16:24.08:1317,24,0	0/0:14,0:24:35.12:0,35,865	0/0:8,0:22:36.12:0,36,1006	0/0:5,0:28:60.21:0,60,1676	1/1:16,9:25:39.09:1903,39,0	1/1:11,9:21:27.09:1547,27,0	1/1:18,1:19:20.98:705,21,0	1/1:12,4:16:18.02:848,18,0	1/1:19,10:30:48.16:2613,48,0	0/0:8,0:32:57.20:0,57,1556	1/1:7,1:8:5.99:197,6,0
chr10	30937582	.	T	TAA	2563.63	PASS	AB=0.769;AC=34;AF=0.607;AN=56;BaseQRankSum=-1.406;DP=456;FS=1.352;HRun=16;HaplotypeScore=81.4451;InbreedingCoeff=0.4587;MQ=79.27;MQ0=2;MQRankSum=0.281;QD=7.91;ReadPosRankSum=-2.041;VQSLOD=0.5263;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:13,20:42:34.01:317,34,0	1/1:0,1:6:16.14:125,16,0	0/0:22,0:14:9.65:0,10,49	0/0:27,0:22:5.02:0,5,48	0/1:10,6:21:1.01:156,0,1	1/1:2,6:9:15.04:175,15,0	0/1:6,9:18:9.55:82,0,10	0/1:14,8:26:12.72:183,0,13	0/0:10,0:11:11.55:0,12,126	1/1:13,1:15:12.57:90,13,0	1/1:8,5:14:16.23:158,16,0	0/1:13,0:14:16.67:79,0,17	1/1:3,5:10:2.98:22,3,0	0/1:10,2:12:4.53:99,0,5	0/0:8,0:11:5.23:0,5,63	1/1:3,2:7:7.75:54,8,0	1/1:7,11:22:25.19:244,25,0	1/1:16,1:16:2.84:206,3,0	0/0:14,0:15:26.33:0,26,189	0/0:9,0:12:8.43:0,8,101	0/0:11,0:11:14.78:0,15,148	1/1:4,1:10:14.40:100,14,0	0/1:16,2:22:5.47:162,0,5	1/1:3,5:11:11.23:91,11,0	1/1:6,6:15:17.23:153,17,0	1/1:4,8:17:5.97:190,6,0	0/0:20,0:22:9.97:0,10,115	1/1:7,1:16:10.12:63,10,0
chr10	30938053	.	CT	C	5145.30	PASS	AB=0.577;AC=35;AF=0.625;AN=56;BaseQRankSum=6.761;DP=453;FS=4.579;HRun=10;HaplotypeScore=57.8672;InbreedingCoeff=0.8887;MQ=69.08;MQ0=1;MQRankSum=-1.171;QD=17.93;ReadPosRankSum=5.493;VQSLOD=5.2617;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,24:28:63.86:549,64,0	1/1:2,4:6:11.99:104,12,0	0/0:33,0:25:50.80:0,51,508	0/0:18,0:12:15.02:0,15,198	1/1:1,18:19:50.99:442,51,0	1/1:4,22:26:56.96:495,57,0	1/1:4,13:17:29.99:260,30,0	1/1:13,21:34:59.93:515,60,0	0/0:11,0:11:30:0,30,314	0/0:17,1:18:19.04:0,19,418	0/0:4,0:4:6:0,6,57	1/1:1,12:13:29.98:260,30,0	1/1:1,7:8:20.99:182,21,0	1/1:4,8:12:20.99:182,21,0	0/0:7,0:7:12.03:0,12,132	0/1:4,11:14:39.37:155,0,39	1/1:5,22:24:47.83:416,48,0	1/1:2,18:20:47.99:417,48,0	0/0:23,1:24:34.06:0,34,581	0/0:21,0:21:51.10:0,51,550	0/0:12,0:12:30.08:0,30,331	1/1:2,6:8:15:130,15,0	1/1:0,12:12:23.99:208,24,0	1/1:2,7:9:17.99:156,18,0	1/1:1,10:11:20.99:182,21,0	1/1:3,13:16:38.95:333,39,0	0/0:18,0:18:45.09:0,45,485	1/1:0,6:6:18:156,18,0
chr10	30938192	.	C	CGT	2144.58	PASS	AB=1.000;AC=35;AF=0.625;AN=56;BaseQRankSum=4.653;DP=342;FS=1.351;HRun=0;HaplotypeScore=99.8368;InbreedingCoeff=0.5115;MQ=62.76;MQ0=6;MQRankSum=-3.524;QD=8.79;ReadPosRankSum=2.403;VQSLOD=3.4777;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:29:6.64:103,7,0	0/1:4,0:4:0.01:0,0,0	0/1:8,0:7:6.95:18,0,7	0/0:5,0:3:5.03:0,5,48	0/0:20,0:19:1.54:0,2,4	1/1:19,0:19:2.57:19,3,0	1/1:11,0:11:2.94:18,3,0	1/1:12,0:10:20.96:213,21,0	0/0:7,0:7:21.03:0,21,290	1/1:8,0:8:24.05:312,24,0	1/1:4,7:11:2.87:25,3,0	1/1:9,0:9:12.02:120,12,0	1/1:10,0:10:3.01:32,3,0	1/1:11,0:11:5.90:67,6,0	0/0:12,0:12:27.08:0,27,389	1/1:6,0:6:3:29,3,0	1/1:24,2:25:41.94:490,42,0	0/1:23,0:23:3.05:205,0,3	0/0:11,0:11:23.93:0,24,299	0/0:13,0:13:5.58:0,6,288	0/0:16,0:16:29.17:0,29,484	0/1:6,0:6:0:0,0,0	1/1:7,0:7:2.98:43,3,0	0/1:7,0:6:5.68:80,0,6	1/1:12,1:13:5.94:47,6,0	1/1:17,0:16:38.91:377,39,0	0/0:14,0:14:29.66:0,30,327	1/1:6,0:5:11.83:118,12,0
chr10	30938193	.	G	GTGCA	4582.24	PASS	AB=0.646;AC=36;AF=0.643;AN=56;BaseQRankSum=2.635;DP=347;FS=1.376;HRun=0;HaplotypeScore=99.1255;InbreedingCoeff=0.5802;MQ=62.18;MQ0=6;MQRankSum=-4.137;QD=18.33;ReadPosRankSum=2.892;VQSLOD=4.7498;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,23:32:6.72:253,7,0	0/1:0,4:4:0.01:0,0,0	0/1:8,0:7:3.94:4,0,36	0/0:5,0:3:4.88:0,5,59	0/0:6,14:19:2.80:0,3,7	1/1:2,14:19:2.87:39,3,0	1/1:2,9:12:3.01:56,3,0	1/1:2,7:9:27.05:500,27,0	0/0:7,0:7:21.03:0,21,396	1/1:8,0:8:15.05:89,15,0	1/1:11,0:11:2.87:25,3,0	1/1:1,8:10:12.04:295,12,0	1/1:2,8:10:2.43:72,2,0	1/1:4,6:11:5.73:139,6,0	0/0:12,0:12:36.05:0,36,598	1/1:0,6:6:2.80:87,3,0	1/1:16,9:24:42.61:1051,43,0	1/1:4,19:24:26.42:518,26,0	0/0:10,0:10:26.83:0,27,427	0/0:13,0:13:22.32:0,22,413	0/0:16,0:16:33.11:0,33,688	0/1:0,6:8:0:0,0,0	1/1:0,7:7:2.98:87,3,0	0/1:2,5:6:7.48:218,0,7	1/1:8,5:13:5.95:104,6,0	1/1:3,14:16:39.02:772,39,0	0/0:14,0:14:24.05:0,24,391	1/1:5,1:5:11.84:272,12,0
chr10	30938198	.	CGT	C	346.68	PASS	AB=0.974;AC=23;AF=0.411;AN=56;BaseQRankSum=2.941;DP=332;FS=32.665;HRun=0;HaplotypeScore=103.6962;InbreedingCoeff=0.3107;MQ=56.42;MQ0=7;MQRankSum=0.401;QD=1.66;ReadPosRankSum=-2.040;VQSLOD=0.2717;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:24,5:28:5.91:32,6,0	0/1:4,0:4:0:0,0,0	0/0:5,0:4:3.86:0,4,22	0/0:5,0:3:0.13:0,0,8	1/1:15,2:16:8.93:64,9,0	0/1:15,1:16:0.01:0,0,0	1/1:9,2:11:4.20:22,4,0	0/1:11,0:9:1.30:37,0,1	0/0:8,0:8:23.92:0,24,350	0/1:8,0:8:13.08:36,0,13	0/1:10,0:10:0:0,0,0	0/1:8,1:9:0.97:6,0,1	0/0:9,1:10:2.60:0,3,12	0/0:9,0:9:4.56:0,5,17	0/0:13,0:13:36.05:0,36,496	1/1:6,1:7:5.62:32,6,0	0/1:26,0:25:31.54:39,0,32	0/1:22,2:24:0.99:87,0,1	0/0:10,0:10:15.76:0,16,237	0/0:13,0:13:29.14:0,29,339	0/0:16,0:16:33.11:0,33,506	0/0:8,0:8:0:0,0,0	1/1:7,0:7:2.22:8,2,0	1/1:7,0:6:0.89:34,1,0	0/0:11,1:12:2.33:0,2,8	1/1:16,0:15:3.78:64,4,0	0/0:14,0:13:12.94:0,13,223	0/1:7,0:6:17.54:32,0,18
chr10	30938205	.	G	GCACACA	1413.87	PASS	AB=0.970;AC=21;AF=0.438;AN=48;BaseQRankSum=-0.432;DP=350;FS=2.781;HRun=0;HaplotypeScore=133.7264;InbreedingCoeff=0.0421;MQ=49.46;MQ0=11;MQRankSum=-3.778;QD=7.07;ReadPosRankSum=0.144;VQSLOD=2.0759;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:8.91:0,9,76	0/1:4,0:4:0:0,0,0	./.	./.	0/0:16,0:15:7.40:0,7,65	0/0:16,0:16:2.60:0,3,21	0/0:10,0:9:2.84:0,3,14	0/0:12,0:9:3.86:0,4,33	0/0:9,0:10:27.06:0,27,473	0/0:6,0:6:3.01:0,3,35	./.	0/1:11,0:11:22.49:41,0,22	0/0:12,0:12:3.01:0,3,38	1/1:9,0:9:3.01:51,3,0	0/0:12,0:13:27.09:0,27,531	0/1:8,0:8:16.59:17,0,30	0/1:30,0:29:95.23:176,0,95	0/1:21,0:20:44.14:44,0,103	1/1:7,2:11:20.25:398,20,0	1/1:4,7:15:9.03:182,9,0	0/1:12,0:19:32.03:32,0,32	./.	1/1:4,0:4:0.89:2,1,0	0/1:9,0:8:27.26:61,0,27	1/1:13,0:13:3.01:44,3,0	0/1:17,0:16:24.46:54,0,24	1/1:8,11:20:21.53:431,22,0	0/1:8,0:7:26.33:26,0,47
chr10	30938240	.	C	CAT	2941.25	PASS	AB=0.980;AC=36;AF=0.720;AN=50;BaseQRankSum=8.536;DP=376;FS=9.181;HRun=0;HaplotypeScore=110.3872;InbreedingCoeff=0.6092;MQ=49.48;MQ0=14;MQRankSum=-2.305;QD=10.54;ReadPosRankSum=1.434;VQSLOD=2.7370;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:25:14.93:134,15,0	1/1:3,0:3:3:25,3,0	0/0:15,0:3:3.01:0,3,33	0/0:9,0:4:11.93:0,12,92	1/1:17,0:17:30:325,30,0	1/1:12,0:12:8.86:95,9,0	1/1:10,0:9:12:125,12,0	1/1:18,0:13:32.76:248,33,0	0/0:12,0:12:36.06:0,36,393	1/1:3,0:2:5.99:50,6,0	./.	1/1:13,1:14:24:246,24,0	1/1:6,0:7:6.88:72,7,0	1/1:9,1:10:8.97:84,9,0	0/0:12,0:11:24.03:0,24,271	1/1:9,0:9:18.02:218,18,0	1/1:33,0:34:48.39:369,48,0	1/1:15,3:17:20.27:253,20,0	0/1:23,0:22:35.01:35,0,238	0/1:20,0:20:17.17:17,0,152	0/0:19,0:19:16.06:0,16,162	./.	./.	1/1:6,1:6:11.46:162,11,0	1/1:5,9:14:3.01:49,3,0	1/1:16,2:17:13.24:393,13,0	0/0:20,0:20:11.17:0,11,153	1/1:12,1:12:7.20:216,7,0
chr10	30938490	.	AATGG	A	9851.88	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=13.230;DP=422;FS=0.875;HRun=0;HaplotypeScore=83.8622;InbreedingCoeff=0.9289;MQ=64.70;MQ0=0;MQRankSum=-6.033;QD=35.70;ReadPosRankSum=2.537;VQSLOD=4.6149;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,18:19:41.96:648,42,0	1/1:0,2:2:3.01:54,3,0	0/0:8,0:8:24.02:0,24,339	0/0:19,0:19:50.68:0,51,804	1/1:1,16:17:47.96:729,48,0	1/1:1,20:21:42.14:752,42,0	1/1:1,11:12:24.90:396,25,0	1/1:8,26:33:78.16:1165,78,0	0/0:21,0:21:57.16:0,57,1299	1/1:1,15:16:42.13:724,42,0	1/1:0,7:7:17.98:286,18,0	1/1:0,13:13:21.07:375,21,0	1/1:1,14:15:30.10:538,30,0	1/1:2,15:17:33.11:592,33,0	0/0:23,0:23:63.16:0,63,1416	1/1:5,11:16:23.97:377,24,0	1/1:1,17:18:39.13:700,39,0	1/1:1,17:18:39.13:700,39,0	0/0:17,0:17:44.89:0,45,861	0/0:17,0:17:45.15:0,45,1165	0/0:14,0:14:36.11:0,36,875	1/1:0,2:2:6.02:107,6,0	1/1:0,10:10:24.08:429,24,0	1/1:1,6:7:6.02:108,6,0	1/1:1,11:12:24.08:431,24,0	1/1:1,15:16:41.05:527,41,0	0/0:27,0:26:75.19:0,75,1676	1/1:0,4:4:12.04:215,12,0
chr10	30938709	.	G	GGGT	391.73	PASS	AB=0.929;AC=5;AF=0.089;AN=56;BaseQRankSum=-3.212;DP=449;FS=9.716;HRun=0;HaplotypeScore=89.6384;InbreedingCoeff=0.5820;MQ=76.79;MQ0=3;MQRankSum=1.990;QD=8.71;ReadPosRankSum=1.397;VQSLOD=2.3782;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:30.09:0,30,398	0/0:8,0:8:6.02:0,6,83	0/0:23,0:15:5.87:0,6,81	0/0:31,0:24:15.05:0,15,205	0/0:17,0:17:24.07:0,24,317	0/0:11,0:11:18.06:0,18,250	0/0:12,0:12:15.05:0,15,208	0/0:24,0:24:30.06:0,30,394	0/0:11,0:11:27.07:0,27,354	1/1:10,5:17:18.06:344,18,0	1/1:13,1:15:6.02:118,6,0	0/0:15,0:15:27.09:0,27,375	0/0:18,0:18:39.11:0,39,523	0/0:16,0:16:33.05:0,33,390	0/0:20,0:20:39.12:0,39,541	0/0:13,0:13:24.08:0,24,333	0/0:26,0:26:45.15:0,45,614	0/0:9,0:9:10.07:0,10,182	0/0:18,0:17:30.09:0,30,401	0/0:12,0:12:21.06:0,21,275	0/0:20,0:20:21.06:0,21,276	0/0:8,0:8:6.02:0,6,83	0/0:15,0:15:12.04:0,12,167	0/0:16,0:16:39.13:0,39,541	0/0:18,0:18:30.10:0,30,412	0/1:12,1:13:47.64:48,0,113	0/0:18,0:18:21.06:0,21,276	0/0:6,0:6:12.04:0,12,167
chr10	30938760	.	TC	T	6985.62	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=5.411;DP=425;FS=5.675;HRun=7;HaplotypeScore=56.6966;InbreedingCoeff=0.9614;MQ=96.30;MQ0=0;MQRankSum=-5.004;QD=25.87;ReadPosRankSum=4.286;VQSLOD=5.4710;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,17:20:54.12:548,54,0	1/1:0,4:4:8.98:81,9,0	0/0:27,0:23:47.42:0,47,527	0/0:28,1:29:50.35:0,50,565	1/1:4,13:17:42.09:427,42,0	1/1:4,6:10:27.02:260,27,0	1/1:1,10:11:30.07:306,30,0	1/1:5,26:31:78.13:780,78,0	0/0:11,0:11:33.11:0,33,412	0/0:11,0:11:27.05:0,27,323	0/0:6,0:6:15.05:0,15,188	1/1:5,17:22:45.10:459,45,0	1/1:1,25:26:72.16:734,72,0	1/1:0,12:12:30.07:306,30,0	0/0:14,0:14:36.12:0,36,453	1/1:2,14:16:4.36:360,4,0	1/1:0,15:15:42.10:428,42,0	1/1:0,11:11:27.06:275,27,0	0/0:12,0:12:27.09:0,27,340	0/0:13,0:13:39.09:0,39,463	0/0:13,0:13:36.12:0,36,453	1/1:0,6:6:17.98:164,18,0	1/1:0,8:8:24.05:245,24,0	1/1:2,18:20:51.11:520,51,0	1/1:3,16:19:45.10:458,45,0	1/1:0,17:17:51.10:513,51,0	0/0:18,0:18:54.16:0,54,667	1/1:1,4:5:12.03:122,12,0
chr10	30938862	.	TAAG	T	11754.31	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=10.170;DP=483;FS=6.513;HRun=0;HaplotypeScore=77.8758;InbreedingCoeff=0.9497;MQ=90.61;MQ0=0;MQRankSum=-6.624;QD=38.92;ReadPosRankSum=2.612;VQSLOD=5.2969;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,18:18:48.12:770,48,0	1/1:0,7:7:17.98:270,18,0	0/0:26,0:26:69.20:0,69,1368	0/0:17,0:17:36.56:0,37,650	1/1:0,21:21:54.05:795,54,0	1/1:2,18:20:42.06:640,42,0	1/1:0,6:6:9.03:150,9,0	1/1:2,28:30:81.25:1296,81,0	0/0:16,0:16:48.15:0,48,1030	0/0:11,0:11:30.10:0,30,678	0/0:13,0:13:39.09:0,39,835	1/1:2,18:20:51.17:838,51,0	1/1:0,22:22:60.20:967,60,0	1/1:0,16:16:45.11:708,45,0	0/0:19,0:19:54.17:0,54,1162	1/1:0,22:22:54.18:899,54,0	1/1:3,13:16:33.11:533,33,0	1/1:1,8:9:24.08:400,24,0	0/0:21,0:21:54.18:0,54,1183	0/0:26,0:26:75.24:0,75,1610	0/0:16,0:16:48.16:0,48,1088	1/1:0,16:15:42.01:610,42,0	1/1:1,17:18:41.72:656,42,0	1/1:2,10:12:14.98:250,15,0	1/1:0,5:5:12.04:200,12,0	1/1:4,23:27:1.17:976,1,0	0/0:16,0:16:45.10:0,45,951	1/1:0,17:17:48.16:800,48,0
chr10	30939122	.	G	GC	13632.47	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-12.260;DP=543;FS=1.269;HRun=3;HaplotypeScore=53.9411;InbreedingCoeff=0.9862;MQ=82.80;MQ0=0;MQRankSum=-2.344;QD=35.41;ReadPosRankSum=1.809;VQSLOD=5.3993;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,19:21:51.17:714,51,0	1/1:0,6:6:15.05:210,15,0	0/0:16,0:16:25.88:0,26,279	0/0:14,0:14:22.86:0,23,315	1/1:0,20:20:54.18:754,54,0	1/1:1,13:14:33.11:462,33,0	1/1:1,27:28:78.26:1092,78,0	1/1:4,25:29:75.21:996,75,0	0/0:18,0:18:51.16:0,51,611	1/1:2,17:19:54.17:726,54,0	1/1:2,13:16:42.14:567,42,0	1/1:2,22:24:66.22:920,66,0	1/1:0,22:22:60.20:840,60,0	1/1:2,36:38:96.32:1337,96,0	0/0:19,0:19:54.17:0,54,647	1/1:2,14:16:39.13:539,39,0	1/1:1,24:25:63.21:882,63,0	1/1:3,14:17:36.12:504,36,0	0/0:9,0:9:21.06:0,21,252	0/0:18,0:18:54.13:0,54,621	0/0:28,0:28:81.24:0,81,960	1/1:1,17:18:42.14:588,42,0	1/1:1,16:17:42.61:587,43,0	1/1:0,20:20:60.19:826,60,0	1/1:3,14:17:33.11:461,33,0	1/1:1,12:13:36.12:502,36,0	0/0:36,0:36:99:0,108,1295	1/1:0,5:5:9.03:126,9,0
chr10	30939541	.	CCTCTCTCTCTCTCTCT	C	1635.33	PASS	AB=0.907;AC=22;AF=0.500;AN=44;BaseQRankSum=2.140;DP=467;FS=0.000;HRun=0;HaplotypeScore=183.2695;InbreedingCoeff=0.4119;MQ=71.93;MQ0=30;MQRankSum=-1.358;QD=8.47;ReadPosRankSum=-0.196;VQSLOD=2.3299;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:16,10:28:0.88:2,1,0	./.	0/0:34,0:20:8.71:0,9,154	0/0:63,0:34:9.75:0,10,298	1/1:7,0:7:3.01:48,3,0	1/1:7,4:12:6.02:258,6,0	1/1:9,7:15:3.01:129,3,0	0/1:24,0:24:89.89:129,0,90	0/0:22,0:21:20.04:0,20,954	0/1:13,1:16:54.81:382,0,55	0/1:10,0:11:0:0,0,0	1/1:6,0:8:2.99:24,3,0	./.	./.	0/0:24,0:22:17.44:0,17,745	1/1:11,4:16:3.01:126,3,0	1/1:9,5:13:6.02:185,6,0	0/1:12,0:10:3.98:112,0,4	0/0:19,0:18:24.08:0,24,913	0/0:12,0:12:0.89:0,1,2	0/0:28,0:25:30.10:0,30,1295	./.	1/1:12,0:13:3.01:96,3,0	0/0:18,1:18:0.47:0,0,1	./.	1/1:9,3:12:9.01:284,9,0	0/0:11,0:9:24.08:0,24,1077	./.
chr10	30939616	.	CAT	C	4426.98	PASS	AB=1.000;AC=46;AF=0.821;AN=56;BaseQRankSum=4.765;DP=553;FS=2.148;HRun=0;HaplotypeScore=120.2893;InbreedingCoeff=0.6574;MQ=51.56;MQ0=24;MQRankSum=0.520;QD=9.54;ReadPosRankSum=1.446;VQSLOD=4.7527;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:24,1:25:11.10:84,11,0	1/1:5,0:5:8.18:49,8,0	0/0:26,0:9:13.29:0,13,166	0/0:23,0:13:18.10:0,18,209	1/1:17,0:15:18.35:146,18,0	1/1:24,0:23:36.19:331,36,0	1/1:16,0:15:13.55:116,14,0	1/1:37,0:36:73.43:631,73,0	0/0:22,0:20:42.04:0,42,498	1/1:20,0:18:42.72:404,43,0	1/1:13,0:11:8.99:74,9,0	1/1:19,0:17:24.19:167,24,0	1/1:17,0:17:19.83:136,20,0	1/1:11,0:11:6.15:39,6,0	0/0:18,0:18:19.71:0,20,348	1/1:19,0:19:38.63:283,39,0	1/1:28,0:28:32.41:239,32,0	1/1:18,1:17:28.50:220,28,0	0/1:24,0:24:23.59:120,0,24	1/1:15,0:14:7.03:40,7,0	1/1:19,0:17:8.56:57,9,0	1/1:25,1:26:35.05:231,35,0	1/1:15,0:13:17.78:156,18,0	1/1:24,0:22:13.35:142,13,0	1/1:14,1:14:15.72:114,16,0	1/1:18,0:18:40.39:318,40,0	1/1:30,0:28:54.36:313,54,0	0/1:8,0:6:17.59:18,0,31
chr10	30939618	.	TAC	T	1439.78	PASS	AB=1.000;AC=13;AF=0.241;AN=54;BaseQRankSum=-2.660;DP=540;FS=2.258;HRun=0;HaplotypeScore=125.8559;InbreedingCoeff=0.3553;MQ=55.56;MQ0=23;MQRankSum=2.521;QD=7.78;ReadPosRankSum=0.912;VQSLOD=3.1405;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:11.78:0,12,80	0/0:5,0:5:2.08:0,2,44	0/0:26,0:9:26.97:0,27,351	0/0:27,0:17:42.92:0,43,502	0/0:17,0:15:2.58:0,3,53	0/1:22,0:21:34.99:35,0,48	0/0:16,0:15:1.80:0,2,127	0/0:36,0:35:9.87:0,10,49	0/0:21,0:19:42.14:0,42,668	0/1:20,0:18:11.63:70,0,12	./.	0/0:18,0:16:6.13:0,6,123	0/0:17,0:17:14.14:0,14,91	0/0:11,0:11:5.67:0,6,34	0/0:17,0:17:33.11:0,33,511	0/0:19,0:19:19.44:0,19,127	0/0:29,0:29:20.84:0,21,192	0/1:17,0:16:9.28:9,0,102	1/1:9,14:23:41.77:422,42,0	1/1:5,10:14:9.01:95,9,0	1/1:19,1:18:24.03:241,24,0	0/0:25,0:25:16.89:0,17,216	0/1:15,0:13:7.37:7,0,51	0/1:23,0:21:27.75:28,0,30	0/0:15,0:14:15.37:0,15,114	0/0:18,0:18:19.60:0,20,147	1/1:30,0:28:59.17:696,59,0	0/0:5,0:4:2.99:0,3,23
chr10	30939902	.	T	TA	1993.01	PASS	AB=1.000;AC=44;AF=0.815;AN=54;BaseQRankSum=-3.229;DP=262;FS=4.282;HRun=7;HaplotypeScore=57.1220;InbreedingCoeff=0.6310;MQ=91.46;MQ0=8;MQRankSum=-3.351;QD=11.59;ReadPosRankSum=-2.526;VQSLOD=1.7798;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,0:7:17.84:132,18,0	1/1:4,1:5:7.22:56,7,0	0/0:49,0:28:31.69:0,32,251	0/0:20,0:10:5.13:0,5,64	1/1:10,0:10:19.56:142,20,0	0/1:5,0:5:0:0,0,0	1/1:14,0:14:21.23:150,21,0	1/1:7,0:7:11.91:89,12,0	0/0:8,0:8:5.96:0,6,47	./.	0/1:1,0:1:0:0,0,0	1/1:7,0:7:5.92:54,6,0	1/1:2,0:2:3:26,3,0	1/1:12,0:10:8.69:58,9,0	0/0:8,0:8:5.96:0,6,45	1/1:3,0:3:0.89:2,1,0	1/1:15,0:15:35.39:271,35,0	1/1:9,0:9:20.78:149,21,0	1/1:8,0:8:19.41:157,19,0	1/1:0,6:6:11.90:86,12,0	1/1:14,0:14:16.55:96,17,0	1/1:3,0:3:6:55,6,0	1/1:3,0:3:8.88:67,9,0	1/1:5,0:5:2.97:24,3,0	1/1:9,0:9:17.85:142,18,0	1/1:14,1:15:20.74:160,21,0	1/1:5,0:5:8.98:74,9,0	1/1:5,1:6:17.94:144,18,0
chr10	30939922	.	GGC	G	1209.29	PASS	AB=0.932;AC=34;AF=0.708;AN=48;BaseQRankSum=-2.139;DP=273;FS=0.000;HRun=0;HaplotypeScore=40.1485;InbreedingCoeff=0.4300;MQ=68.60;MQ0=36;MQRankSum=-4.161;QD=7.11;ReadPosRankSum=-1.064;VQSLOD=2.1546;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,3:8:11.39:92,11,0	0/1:3,0:3:0:0,0,0	0/0:54,1:20:12.95:0,13,297	0/1:31,0:6:21:21,0,84	1/1:8,0:9:2.99:23,3,0	1/1:7,4:11:20.77:184,21,0	1/1:9,4:12:15:158,15,0	1/1:10,0:9:14.84:100,15,0	0/0:5,0:5:14.99:0,15,176	./.	./.	1/1:7,0:7:5.65:67,6,0	1/1:2,0:2:3:29,3,0	0/1:5,3:6:13.16:46,0,13	0/0:4,0:4:2.35:0,2,33	1/1:2,7:9:1.55:4,2,0	1/1:6,2:8:17.39:145,17,0	1/1:8,0:7:14.72:127,15,0	0/1:8,0:7:10.54:11,0,46	./.	0/0:20,0:19:8.60:0,9,199	1/1:7,0:7:17.02:111,17,0	./.	1/1:3,0:3:5.88:36,6,0	1/1:9,0:9:14.78:96,15,0	1/1:7,1:7:6.02:71,6,0	0/0:9,0:8:6.02:0,6,98	1/1:5,0:5:5.94:41,6,0
chr10	30939923	.	GC	G	1088.63	PASS	AB=1.000;AC=33;AF=0.688;AN=48;BaseQRankSum=-0.794;DP=263;FS=1.737;HRun=2;HaplotypeScore=36.2345;InbreedingCoeff=0.5863;MQ=65.98;MQ0=36;MQRankSum=-4.359;QD=8.44;ReadPosRankSum=-0.758;VQSLOD=0.7925;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,0:7:11.50:76,11,0	./.	0/0:52,0:18:6.53:0,7,134	0/0:31,0:6:4.52:0,5,59	1/1:6,1:8:2.92:17,3,0	1/1:11,0:11:20.70:137,21,0	1/1:6,6:12:14.82:118,15,0	1/1:7,1:8:14.88:114,15,0	0/0:5,0:5:14.92:0,15,123	0/0:1,0:1:0:0,0,0	./.	1/1:6,1:7:11.82:76,12,0	1/1:0,2:2:3.01:37,3,0	1/1:4,2:4:4.01:24,4,0	0/0:5,0:5:4.85:0,5,33	1/1:8,1:9:3.01:31,3,0	1/1:6,2:8:17.80:143,18,0	1/1:6,2:7:14.73:106,15,0	0/1:7,0:6:8.23:8,0,31	./.	0/0:20,0:19:21.90:0,22,175	1/1:6,1:7:14.97:103,15,0	./.	1/1:3,0:3:5.88:36,6,0	1/1:8,1:9:14.83:107,15,0	1/1:3,3:6:5.98:55,6,0	0/0:9,0:8:6.02:0,6,68	1/1:4,0:5:5.99:56,6,0
chr10	30940008	.	C	CA	1445.74	PASS	AB=1.000;AC=42;AF=0.750;AN=56;BaseQRankSum=5.667;DP=381;FS=5.085;HRun=14;HaplotypeScore=72.8826;InbreedingCoeff=0.6096;MQ=44.65;MQ0=6;MQRankSum=-5.962;QD=5.07;ReadPosRankSum=-1.842;VQSLOD=1.9212;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:15:5.80:33,6,0	1/1:3,0:3:8.52:42,9,0	0/1:11,0:6:5.39:5,0,29	0/1:14,0:10:3.81:50,0,4	1/1:20,0:20:3.72:89,4,0	1/1:14,0:13:14.20:71,14,0	1/1:13,1:14:11.47:64,11,0	1/1:14,0:13:12.55:69,13,0	0/0:14,1:16:10.97:0,11,128	1/1:12,6:18:4.54:151,5,0	1/1:4,12:16:23.79:191,24,0	1/1:7,0:9:14.33:77,14,0	1/1:12,0:14:8.52:43,9,0	1/1:5,1:10:8.05:36,8,0	0/0:16,1:18:8.41:0,8,150	1/1:12,1:14:2.62:91,3,0	1/1:15,1:17:28.04:147,28,0	1/1:15,1:14:17.24:98,17,0	0/0:14,0:17:6.16:0,6,111	0/0:9,0:10:7.06:0,7,54	0/0:12,0:14:15.11:0,15,87	1/1:5,0:8:11.36:57,11,0	1/1:7,0:7:5.78:32,6,0	1/1:6,0:7:13.24:67,13,0	1/1:15,1:17:22.66:124,23,0	1/1:14,0:15:12.98:60,13,0	0/0:20,0:21:34.85:0,35,213	1/1:5,1:6:4.91:27,5,0
chr10	30940019	.	A	AAAAAAG	6987.33	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=0.494;DP=463;FS=9.072;HRun=0;HaplotypeScore=101.7359;InbreedingCoeff=0.9225;MQ=60.21;MQ0=3;MQRankSum=-7.480;QD=25.59;ReadPosRankSum=-0.035;VQSLOD=3.8352;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,9:18:8.93:135,9,0	1/1:0,3:5:9.03:257,9,0	0/0:20,0:14:26.83:0,27,272	0/0:17,0:13:13.82:0,14,228	1/1:5,10:21:4.59:501,5,0	1/1:4,7:14:17.65:459,18,0	1/1:3,12:22:14.05:261,14,0	1/1:6,0:19:47.89:694,48,0	0/0:20,1:21:31.26:0,31,463	0/0:20,0:20:41.34:0,41,380	0/0:18,0:17:26.01:0,26,244	1/1:2,4:10:15.05:454,15,0	1/1:6,6:18:14.95:308,15,0	1/1:11,0:11:23.68:266,24,0	0/0:20,0:20:45.97:0,46,576	1/1:13,2:15:10.18:338,10,0	1/1:4,11:21:35.32:849,35,0	1/1:3,10:18:20.56:495,21,0	0/0:19,0:19:39.41:0,39,557	0/0:13,0:12:14.49:0,14,210	0/0:16,0:16:27.17:0,27,415	1/1:4,5:13:23.80:350,24,0	1/1:4,2:9:12.41:171,12,0	1/1:1,2:6:12.04:237,12,0	1/1:7,0:18:26.33:381,26,0	1/1:8,0:25:29.88:683,30,0	0/0:26,0:26:41.46:0,41,789	1/1:4,0:6:8.98:150,9,0
chr10	30941284	.	C	CT	17568.31	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-15.236;DP=598;FS=4.554;HRun=1;HaplotypeScore=54.0182;InbreedingCoeff=0.9995;MQ=82.17;MQ0=0;MQRankSum=-3.624;QD=41.83;ReadPosRankSum=2.756;VQSLOD=5.4097;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,41:41:99:1753,117,0	1/1:0,14:14:39.13:585,39,0	0/0:22,0:22:60.18:0,60,752	0/0:22,0:22:57.11:0,57,701	1/1:1,15:16:39.13:582,39,0	1/1:0,20:20:60.20:899,60,0	1/1:1,20:21:51.17:765,51,0	1/1:0,22:22:66.19:928,66,0	0/0:28,0:28:84.27:0,84,1090	1/1:0,20:20:60.19:879,60,0	1/1:0,9:9:27.09:405,27,0	1/1:0,24:24:66.22:989,66,0	1/1:1,15:16:45.11:650,45,0	1/1:0,18:18:54.18:809,54,0	0/0:36,0:36:99:0,102,1324	1/1:1,21:22:27.26:905,27,0	1/1:1,32:33:96.33:1439,96,0	1/1:1,23:24:69.23:1034,69,0	0/0:18,0:17:48.13:0,48,607	0/0:13,0:13:33.11:0,33,428	0/0:19,0:19:51.12:0,51,643	1/1:0,14:14:39.13:585,39,0	1/1:0,11:11:30.10:450,30,0	1/1:2,21:23:54.18:809,54,0	1/1:0,26:26:75.25:1124,75,0	1/1:1,30:31:90.30:1348,90,0	0/0:20,0:19:57.17:0,57,721	1/1:1,14:15:42.14:629,42,0
chr10	30941628	.	TC	T	2883.75	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=2.158;DP=709;FS=0.409;HRun=5;HaplotypeScore=109.3316;InbreedingCoeff=0.9892;MQ=82.61;MQ0=0;MQRankSum=-0.704;QD=26.22;ReadPosRankSum=3.267;VQSLOD=2.6837;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,135,1787	0/0:11,0:11:33.11:0,33,450	0/0:17,1:18:11.10:0,11,520	0/0:35,0:35:78.34:0,78,1201	0/0:27,0:27:57.18:0,57,761	0/0:17,0:17:51.16:0,51,681	0/0:34,0:34:99:0,99,1320	0/0:30,0:30:75.18:0,75,923	0/0:29,0:29:87.28:0,87,1174	0/0:30,0:30:87.28:0,87,1172	0/0:16,0:16:45.09:0,45,577	0/0:18,0:18:51.16:0,51,681	0/0:16,0:16:42.14:0,42,574	0/0:25,0:25:63.21:0,63,861	0/0:32,0:32:96.29:0,96,1267	0/0:38,0:38:99:0,111,1470	0/0:35,0:35:99:0,102,1344	0/0:26,0:26:72.17:0,72,931	1/1:2,16:18:45.12:503,45,0	1/1:2,18:20:51.13:569,51,0	1/1:2,43:45:99:1292,114,0	0/0:20,0:20:57.19:0,57,764	0/0:21,0:21:60.17:0,60,786	0/0:29,0:29:84.25:0,84,1115	0/0:16,0:16:45.12:0,45,580	0/0:17,0:17:45.11:0,45,568	1/1:2,25:27:60.17:680,60,0	0/0:10,0:10:27.07:0,27,352
chr10	30941943	.	G	GAAATTC	42260.05	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-9.359;DP=732;FS=2.930;HRun=0;HaplotypeScore=138.2060;InbreedingCoeff=0.9822;MQ=74.10;MQ0=0;MQRankSum=-19.480;QD=85.72;ReadPosRankSum=0.576;VQSLOD=6.1299;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,16:26:75.26:2397,75,0	1/1:6,11:17:48.16:1581,48,0	0/0:39,0:39:99:0,113,2373	0/0:23,0:23:60.20:0,60,1350	1/1:13,26:39:96.20:2908,96,0	1/1:6,25:32:81.23:2759,81,0	1/1:8,15:23:63.14:2079,63,0	1/1:13,12:27:66.21:2044,66,0	0/0:21,0:21:57.20:0,57,1323	1/1:7,20:29:84.22:2593,84,0	1/1:7,17:26:72.12:2244,72,0	1/1:3,22:27:69.24:2402,69,0	1/1:5,26:35:93.32:3296,93,0	1/1:7,17:25:72.18:2465,72,0	0/0:33,0:33:96.32:0,96,2190	1/1:3,21:26:66.23:2296,66,0	1/1:2,10:13:30.10:1016,30,0	1/1:6,5:13:24.08:818,24,0	0/0:31,0:31:90.30:0,90,2021	0/0:37,0:37:99:0,102,2323	0/0:23,0:23:60.21:0,60,1385	1/1:7,22:33:78.22:2493,78,0	1/1:3,20:24:66.10:2311,66,0	1/1:4,17:23:48.12:1515,48,0	1/1:4,15:20:54.18:1857,54,0	1/1:6,23:31:90.30:2982,90,0	0/0:32,0:32:93.32:0,93,2153	1/1:3,0:3:6.02:204,6,0
chr10	30941946	.	A	ATTC	11246.19	PASS	AB=0.984;AC=32;AF=0.571;AN=56;BaseQRankSum=18.815;DP=669;FS=0.922;HRun=0;HaplotypeScore=182.4225;InbreedingCoeff=0.3683;MQ=77.14;MQ0=0;MQRankSum=-19.412;QD=26.21;ReadPosRankSum=6.550;VQSLOD=4.3684;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:22:69.61:499,0,70	1/1:15,0:15:36.96:406,37,0	0/0:41,0:41:99:0,119,2034	0/0:23,0:23:66.19:0,66,1166	0/1:36,0:36:99:627,0,237	0/1:32,0:32:49.68:812,0,50	0/1:21,0:21:69.48:469,0,69	1/1:18,0:17:13.25:415,13,0	0/0:21,0:21:63.20:0,63,1143	0/1:22,0:23:25.16:678,0,25	0/1:20,2:22:88.97:562,0,89	0/1:26,0:26:32.13:686,0,32	1/1:31,0:32:90.27:1072,90,0	1/1:19,3:22:12.21:673,12,0	0/0:34,0:34:99:0,99,1817	1/1:26,0:26:5.39:687,5,0	1/1:10,0:10:15.93:308,16,0	1/1:9,0:9:15.01:187,15,0	0/0:30,0:30:90.31:0,90,1675	0/0:36,0:36:99:0,108,2003	0/0:23,0:23:66.21:0,66,1186	0/1:25,0:25:62.46:611,0,62	1/1:22,0:22:19.35:671,19,0	1/1:18,0:18:40.38:440,40,0	1/1:18,1:19:51.78:584,52,0	1/1:29,0:29:34.72:833,35,0	0/0:32,0:32:93.32:0,93,1725	1/1:2,0:2:3:27,3,0
chr10	30941947	.	A	AAAC	4438.27	PASS	AB=0.992;AC=29;AF=0.518;AN=56;BaseQRankSum=18.617;DP=673;FS=3.233;HRun=0;HaplotypeScore=206.5236;InbreedingCoeff=0.2068;MQ=76.12;MQ0=0;MQRankSum=-18.618;QD=10.23;ReadPosRankSum=7.797;VQSLOD=3.5808;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:23:82.05:179,0,82	0/1:15,0:15:31.98:132,0,32	0/0:40,0:40:99:0,120,1896	0/0:23,0:23:56.35:0,56,1023	0/1:37,0:37:99:247,0,242	0/1:32,0:32:7:297,0,7	0/1:22,0:22:71.18:171,0,71	0/1:18,0:17:37.72:123,0,38	0/0:21,0:21:63.19:0,63,1075	1/1:22,0:23:0.21:249,0,0	0/1:20,1:22:45.57:250,0,46	1/1:26,0:26:7.96:280,8,0	1/1:32,0:32:86.55:469,87,0	1/1:19,2:22:21:365,21,0	0/0:34,0:34:99:0,102,1772	1/1:27,0:27:10.60:269,11,0	0/1:10,0:10:2.80:111,0,3	0/1:9,0:9:0.85:61,0,1	0/0:30,0:30:90.28:0,90,1556	0/0:36,0:36:99:0,108,1820	0/0:23,0:23:66.20:0,66,1112	0/1:26,0:26:17.64:240,0,18	1/1:22,0:22:38.38:298,38,0	0/1:18,0:18:0.62:154,0,1	1/1:18,1:19:25.10:244,25,0	1/1:30,0:30:0.04:295,0,0	0/0:32,0:32:93.32:0,93,1653	1/1:1,0:1:1.25:3,1,0
chr10	30942870	.	A	AT	3743.01	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-2.081;DP=620;FS=5.386;HRun=8;HaplotypeScore=126.9225;InbreedingCoeff=0.9698;MQ=78.19;MQ0=0;MQRankSum=-1.104;QD=26.93;ReadPosRankSum=0.386;VQSLOD=2.1970;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:90.02:0,90,818	0/0:5,0:5:15.01:0,15,137	0/0:16,0:16:23.18:0,23,283	0/0:11,0:10:12.54:0,13,165	0/0:21,0:21:57.03:0,57,522	0/0:23,0:23:66.02:0,66,599	0/0:23,0:23:69.03:0,69,628	0/0:33,0:33:81.01:0,81,735	0/0:23,0:23:63.03:0,63,576	1/1:4,19:23:57.15:646,57,0	1/1:2,13:15:36.11:415,36,0	0/0:22,0:22:60.03:0,60,549	0/0:30,0:30:72.03:0,72,659	0/0:18,0:18:48.01:0,48,435	0/0:24,0:24:63.01:0,63,572	0/0:17,0:17:51.01:0,51,462	0/0:31,0:31:84.02:0,84,763	0/0:18,0:18:50.99:0,51,459	1/1:6,20:26:57.15:640,57,0	1/1:3,22:25:60.18:692,60,0	1/1:1,15:16:33.10:381,33,0	0/0:19,0:19:51.03:0,51,467	0/0:39,0:41:99:0,118,1051	0/0:13,0:13:36.02:0,36,329	0/0:25,0:25:69.03:0,69,631	0/0:27,1:28:49.41:0,49,701	1/1:1,33:34:84.25:969,84,0	0/0:5,0:5:6:0,6,55
chr10	30944135	.	AGG	A	4421.38	PASS	AC=44;AF=0.846;AN=52;BaseQRankSum=4.375;DP=361;FS=30.596;HRun=2;HaplotypeScore=68.1355;InbreedingCoeff=0.7646;MQ=49.62;MQ0=28;MQRankSum=-5.108;QD=21.89;ReadPosRankSum=-1.150;VQSLOD=1.1595;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,17:21:51.12:608,51,0	1/1:2,1:2:6.02:81,6,0	0/0:58,0:9:6.60:0,7,119	0/0:66,1:17:6.30:0,6,278	1/1:2,7:8:15.04:187,15,0	1/1:5,4:9:18.06:239,18,0	1/1:1,10:10:25.63:290,26,0	1/1:7,6:8:12.94:121,13,0	0/0:11,0:12:35.14:0,35,467	1/1:7,1:8:18.78:139,19,0	1/1:9,3:12:26.92:249,27,0	1/1:2,4:5:15.05:200,15,0	1/1:0,2:3:8.99:95,9,0	1/1:1,2:2:5.98:59,6,0	0/0:17,0:15:45.02:0,45,625	1/1:4,6:10:24.05:284,24,0	1/1:6,4:8:18.03:196,18,0	1/1:7,6:11:23.97:305,24,0	1/1:7,1:8:21.07:203,21,0	1/1:5,3:9:19.77:157,20,0	1/1:3,1:4:7.82:59,8,0	./.	1/1:4,0:3:3.01:35,3,0	1/1:2,3:5:9.03:122,9,0	1/1:5,2:8:15.01:168,15,0	1/1:8,10:17:48.03:536,48,0	1/1:7,2:7:11.21:87,11,0	./.
chr10	30944139	.	A	AG	804.91	PASS	AB=0.818;AC=9;AF=0.161;AN=56;BaseQRankSum=-1.523;DP=403;FS=0.000;HRun=0;HaplotypeScore=89.6813;InbreedingCoeff=0.2383;MQ=50.29;MQ0=28;MQRankSum=-3.294;QD=5.92;ReadPosRankSum=1.925;VQSLOD=3.4688;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:24:45.21:0,45,250	0/0:3,0:2:5.74:0,6,38	0/0:62,0:10:22.32:0,22,183	0/1:78,0:20:13.09:13,0,253	0/0:10,0:8:12.71:0,13,74	0/0:8,0:8:16.14:0,16,118	0/0:11,0:10:22.31:0,22,124	0/0:17,0:11:14.96:0,15,97	0/0:12,0:12:35.95:0,36,432	1/1:6,4:10:20.14:278,20,0	0/1:5,6:12:17.48:187,0,17	0/0:7,0:6:14.30:0,14,94	0/0:4,0:4:10.73:0,11,68	0/0:4,0:3:8.92:0,9,65	0/0:18,0:16:48.13:0,48,612	0/0:11,0:10:23.16:0,23,140	0/0:10,0:8:17.30:0,17,108	0/0:15,0:13:29.18:0,29,171	0/1:9,3:12:19.87:195,0,20	0/1:10,2:12:64.32:103,0,64	0/1:3,1:4:10.56:38,0,11	0/0:3,0:2:2.68:0,3,11	0/0:5,0:3:4.50:0,4,16	0/0:5,0:5:8.04:0,8,58	0/0:8,0:8:13.72:0,14,92	0/0:20,0:19:49.10:0,49,313	1/1:5,3:6:7.48:135,7,0	0/0:7,0:5:6.43:0,6,43
chr10	30944141	.	AAG	A	1412.17	PASS	AB=0.988;AC=39;AF=0.696;AN=56;BaseQRankSum=2.866;DP=418;FS=12.895;HRun=0;HaplotypeScore=91.7423;InbreedingCoeff=0.4126;MQ=51.34;MQ0=28;MQRankSum=-2.652;QD=6.30;ReadPosRankSum=-3.390;VQSLOD=0.8003;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:27,1:25:48.53:280,49,0	1/1:3,0:2:5.88:35,6,0	0/0:65,0:10:17.56:0,18,229	0/0:81,0:21:1.70:0,2,295	1/1:10,1:9:14.07:87,14,0	1/1:8,0:8:14:78,14,0	1/1:11,0:10:12.54:92,13,0	1/1:18,0:12:4.94:78,5,0	0/0:11,0:11:30.10:0,30,519	0/0:10,0:10:13.56:0,14,67	0/1:13,0:13:45.23:49,0,45	1/1:7,0:6:17.74:114,18,0	0/1:4,0:4:2.93:25,0,3	1/1:5,0:4:3.29:21,3,0	0/0:18,0:16:42:0,42,695	1/1:12,0:11:22.09:127,22,0	1/1:10,0:8:15.42:73,15,0	0/1:14,1:13:18.98:83,0,19	0/1:14,0:14:28.98:29,0,121	0/1:12,0:12:12.68:13,0,39	1/1:4,0:4:4.72:16,5,0	1/1:2,1:2:2.50:9,2,0	1/1:6,0:4:5.37:24,5,0	1/1:5,0:5:6.80:40,7,0	1/1:8,0:8:10.76:55,11,0	1/1:19,1:19:39.38:222,39,0	0/0:8,0:6:11.66:0,12,69	1/1:7,0:5:7.18:44,7,0
chr10	30944148	.	AAAG	A	4521.50	PASS	AB=0.998;AC=44;AF=0.786;AN=56;BaseQRankSum=1.831;DP=444;FS=3.377;HRun=0;HaplotypeScore=93.3204;InbreedingCoeff=0.2474;MQ=56.76;MQ0=27;MQRankSum=-1.038;QD=13.26;ReadPosRankSum=-1.767;VQSLOD=4.1558;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:21,3:22:31.69:520,32,0	1/1:2,0:2:6.02:92,6,0	0/0:76,0:15:13.37:0,13,294	0/1:100,1:26:19.73:20,0,402	1/1:13,1:12:24.08:348,24,0	1/1:6,0:6:15:222,15,0	1/1:6,4:10:23.23:299,23,0	1/1:9,9:12:4.39:279,4,0	0/0:11,0:11:33.11:0,33,672	0/1:11,0:11:77.10:77,0,88	0/1:13,0:13:49.74:50,0,185	1/1:9,0:8:17.99:248,18,0	1/1:4,0:4:8.75:65,9,0	1/1:7,0:6:17.71:182,18,0	0/0:16,0:15:42.14:0,42,914	1/1:11,0:10:29.88:345,30,0	1/1:9,0:9:17.16:193,17,0	1/1:13,0:13:15.69:307,16,0	0/1:16,0:16:42.47:42,0,163	0/1:10,0:10:40.03:49,0,40	1/1:4,0:4:6:65,6,0	1/1:3,0:3:3.01:51,3,0	1/1:1,4:4:3.01:51,3,0	1/1:5,1:6:9.03:143,9,0	1/1:11,0:11:15.89:185,16,0	1/1:13,3:15:38.12:471,38,0	0/1:10,0:9:71.28:105,0,71	1/1:4,0:4:11.99:115,12,0
chr10	30944151	.	G	GA	5630.33	PASS	AB=0.721;AC=47;AF=0.839;AN=56;BaseQRankSum=4.292;DP=470;FS=5.934;HRun=3;HaplotypeScore=85.1190;InbreedingCoeff=0.4086;MQ=56.49;MQ0=28;MQRankSum=-2.873;QD=15.47;ReadPosRankSum=0.456;VQSLOD=4.2159;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,18:24:48.05:614,48,0	1/1:0,2:2:6.02:73,6,0	0/0:76,0:16:11.55:0,12,202	0/1:98,0:26:26.80:27,0,264	1/1:8,7:13:23.92:250,24,0	1/1:0,8:8:15.01:164,15,0	1/1:10,3:12:26.93:266,27,0	1/1:20,2:16:24:283,24,0	0/0:11,1:12:35.81:0,36,388	1/1:3,10:13:2.45:335,2,0	0/1:5,8:13:45.12:224,0,45	1/1:3,7:9:18:210,18,0	1/1:0,3:3:9.03:126,9,0	1/1:1,6:6:18.06:242,18,0	0/0:16,0:15:42.12:0,42,491	1/1:1,10:10:30.05:377,30,0	1/1:3,5:8:20.62:219,21,0	1/1:5,9:14:28.33:355,28,0	1/1:6,11:17:1.19:340,1,0	1/1:3,7:10:15.03:204,15,0	1/1:2,3:5:6.02:83,6,0	1/1:2,1:3:3.01:31,3,0	1/1:5,0:4:3.01:31,3,0	1/1:2,5:7:9.03:108,9,0	1/1:2,9:11:18.05:233,18,0	1/1:12,7:18:38.92:443,39,0	0/1:3,9:10:12.77:227,0,13	1/1:0,7:7:12.04:166,12,0
chr10	30944367	.	AC	A	1961.72	PASS	AB=0.704;AC=33;AF=0.589;AN=56;BaseQRankSum=6.819;DP=320;FS=9.806;HRun=1;HaplotypeScore=118.0365;InbreedingCoeff=0.4248;MQ=52.75;MQ0=1;MQRankSum=-5.913;QD=9.81;ReadPosRankSum=2.509;VQSLOD=0.8308;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,3:8:6.18:63,6,0	1/1:0,2:4:8.72:58,9,0	0/0:18,1:15:18.96:0,19,451	0/0:5,0:4:11.77:0,12,139	1/1:10,13:24:25.40:274,25,0	0/1:7,2:10:9.75:84,0,10	1/1:4,7:11:12.21:141,12,0	1/1:4,0:4:8.75:68,9,0	0/0:17,0:17:51.16:0,51,770	0/1:9,1:16:6.71:77,0,7	1/1:6,1:18:0.11:84,0,0	1/1:4,2:6:8.89:62,9,0	1/1:4,2:7:17.86:128,18,0	1/1:3,1:4:5.95:42,6,0	0/0:17,0:17:51.16:0,51,781	1/1:1,5:6:17.92:135,18,0	0/1:4,4:15:37.47:73,0,37	1/1:4,1:6:12.78:95,13,0	0/0:15,0:15:40.50:0,41,515	0/0:21,0:21:56.67:0,57,748	0/0:8,0:8:20.99:0,21,228	0/1:11,1:12:52.44:124,0,52	0/1:8,3:13:1.70:168,0,2	1/1:3,0:5:8.94:66,9,0	0/1:4,6:10:13.79:129,0,14	1/1:1,7:11:32.51:246,33,0	0/0:17,0:17:45.70:0,46,546	0/1:3,1:8:35.98:38,0,36
chr10	30944370	.	AC	A	2310.18	PASS	AB=1.000;AC=42;AF=0.750;AN=56;BaseQRankSum=7.270;DP=320;FS=6.957;HRun=1;HaplotypeScore=119.6659;InbreedingCoeff=0.6642;MQ=49.86;MQ0=1;MQRankSum=-7.283;QD=10.00;ReadPosRankSum=-0.319;VQSLOD=1.0256;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,3:8:11.95:96,12,0	1/1:2,2:4:8.82:60,9,0	0/0:18,0:14:27.32:0,27,494	0/0:7,0:5:12.04:0,12,166	1/1:9,13:21:41.05:292,41,0	1/1:9,2:11:21.53:132,22,0	1/1:3,6:10:19.54:147,20,0	1/1:7,0:6:12.18:70,12,0	0/0:18,0:18:54.17:0,54,814	1/1:15,0:16:37.93:202,38,0	1/1:17,0:18:3.41:117,3,0	1/1:5,2:7:11.26:70,11,0	1/1:6,0:6:17.86:127,18,0	1/1:2,1:3:5.95:42,6,0	0/0:16,0:16:48.16:0,48,756	1/1:1,5:6:16.49:117,16,0	1/1:11,4:15:17.10:114,17,0	1/1:4,1:5:9.37:68,9,0	0/1:15,0:15:18.42:18,0,240	0/0:21,0:21:53.50:0,53,500	0/0:9,0:9:20.95:0,21,197	1/1:9,1:10:9.56:122,10,0	1/1:10,3:13:24.55:183,25,0	1/1:5,0:5:5.92:39,6,0	1/1:3,6:9:16.77:131,17,0	1/1:7,7:14:36.60:243,37,0	0/1:19,0:19:58.93:59,0,233	1/1:7,1:8:1.55:48,2,0
chr10	30944373	.	AC	A	3132.42	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=9.102;DP=331;FS=6.344;HRun=1;HaplotypeScore=123.7445;InbreedingCoeff=0.7848;MQ=48.79;MQ0=1;MQRankSum=-6.988;QD=11.56;ReadPosRankSum=2.179;VQSLOD=2.1575;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,3:6:11.96:97,12,0	1/1:3,1:4:8.82:60,9,0	0/0:17,0:13:21.33:0,21,402	0/0:8,0:5:12.04:0,12,161	1/1:14,10:23:40.96:293,41,0	1/1:10,2:12:24.21:142,24,0	1/1:5,5:10:19.65:146,20,0	1/1:9,0:8:13.95:67,14,0	0/0:18,0:18:54.17:0,54,813	1/1:16,0:16:29.50:175,29,0	1/1:17,0:17:2.29:108,2,0	1/1:5,1:6:13.12:77,13,0	1/1:9,0:9:26.20:170,26,0	1/1:3,1:4:5.95:42,6,0	0/0:17,0:17:51.16:0,51,779	1/1:2,4:6:16.49:118,16,0	1/1:10,4:14:17.30:115,17,0	1/1:5,1:6:11.58:79,12,0	1/1:16,0:16:43.21:223,43,0	1/1:21,0:21:47.92:233,48,0	1/1:10,0:10:18.33:103,18,0	1/1:9,1:10:9.89:122,10,0	1/1:11,1:12:24.59:195,25,0	1/1:5,0:5:5.88:36,6,0	1/1:3,6:9:16.80:131,17,0	1/1:11,4:15:37.30:232,37,0	1/1:22,0:22:52.92:282,53,0	1/1:7,1:8:2.74:51,3,0
chr10	30944382	.	A	AC	3852.49	PASS	AB=0.917;AC=46;AF=0.821;AN=56;BaseQRankSum=9.009;DP=349;FS=14.939;HRun=0;HaplotypeScore=124.5418;InbreedingCoeff=0.6660;MQ=56.19;MQ0=1;MQRankSum=-7.843;QD=13.38;ReadPosRankSum=1.253;VQSLOD=4.4435;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,0:7:11.66:82,12,0	1/1:4,0:4:8.12:47,8,0	0/0:15,0:14:41.77:0,42,461	0/0:10,0:7:20.99:0,21,233	1/1:26,0:25:50.76:333,51,0	1/1:11,0:11:24.15:142,24,0	1/1:10,0:11:16.31:147,16,0	1/1:15,0:15:41.65:323,42,0	0/0:19,0:19:57.17:0,57,766	1/1:8,0:15:37.11:228,37,0	1/1:17,0:21:39.46:213,39,0	1/1:6,0:6:14.87:108,15,0	1/1:11,0:11:29.48:227,29,0	1/1:3,0:3:5.98:46,6,0	0/0:17,0:17:41.76:0,42,607	1/1:8,0:8:23.32:160,23,0	1/1:11,1:12:5.50:94,6,0	1/1:6,0:6:12.40:91,12,0	1/1:11,8:19:16.56:306,17,0	1/1:18,3:21:50.97:249,51,0	0/1:8,0:10:9.23:60,0,9	1/1:10,0:10:6.06:121,6,0	1/1:10,0:10:6.77:56,7,0	1/1:2,4:6:2.95:35,3,0	1/1:10,0:10:20.71:131,21,0	1/1:10,6:16:45.43:301,45,0	1/1:22,1:23:57.83:319,58,0	0/1:7,0:7:1.03:34,0,1
chr10	30944383	.	A	AC	1146.57	PASS	AB=0.969;AC=17;AF=0.304;AN=56;BaseQRankSum=-1.846;DP=353;FS=3.535;HRun=0;HaplotypeScore=134.5508;InbreedingCoeff=0.3589;MQ=56.20;MQ0=1;MQRankSum=-0.622;QD=7.26;ReadPosRankSum=-0.275;VQSLOD=3.6800;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:6,1:7:7.99:8,0,40	0/0:4,0:4:7.28:0,7,34	0/0:15,0:14:41.98:0,42,471	0/0:10,0:7:21.01:0,21,237	0/0:26,0:25:28.17:0,28,179	0/1:12,0:12:7.75:8,0,52	0/0:11,0:11:5.61:0,6,53	0/1:15,0:15:25.02:42,0,25	0/0:19,0:19:57.17:0,57,766	0/1:15,0:15:22.82:23,0,56	0/0:21,0:21:8.92:0,9,130	0/0:6,0:6:6.71:0,7,26	0/1:12,0:12:7.95:37,0,8	0/0:3,0:3:0.34:0,0,3	0/0:17,0:17:44.76:0,45,633	0/0:8,0:8:8.55:0,9,38	0/0:12,0:12:23.16:0,23,122	0/1:6,0:6:1.41:1,0,4	1/1:12,7:19:12.91:210,13,0	1/1:6,16:22:37.94:405,38,0	1/1:5,5:10:19.39:184,19,0	0/1:9,1:10:19.88:20,0,97	0/0:10,0:10:15.72:0,16,127	1/1:6,0:6:2.46:9,2,0	0/0:10,0:10:26.20:0,26,129	0/0:16,0:16:7.58:0,8,54	1/1:9,15:24:40.40:371,40,0	0/0:7,0:7:13.37:0,13,100
chr10	30944386	.	A	AC	5518.73	PASS	AB=1.000;AC=47;AF=0.839;AN=56;BaseQRankSum=8.345;DP=369;FS=4.111;HRun=1;HaplotypeScore=123.4301;InbreedingCoeff=0.7946;MQ=63.03;MQ0=1;MQRankSum=-8.303;QD=18.21;ReadPosRankSum=0.515;VQSLOD=5.0865;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,1:7:20.85:156,21,0	1/1:3,0:3:7.48:47,7,0	0/0:16,0:15:38.21:0,38,447	0/0:12,0:10:14.18:0,14,195	1/1:26,0:25:57.23:401,57,0	1/1:13,0:14:33.65:218,34,0	1/1:9,0:13:22.21:177,22,0	1/1:18,0:18:50.58:383,51,0	0/0:21,0:21:63.17:0,63,762	1/1:16,0:16:40.21:251,40,0	1/1:21,0:21:50.19:290,50,0	1/1:6,0:6:17.53:129,18,0	1/1:11,0:11:32.67:264,33,0	1/1:4,0:4:8.99:75,9,0	0/0:17,0:17:40.98:0,41,561	1/1:11,0:10:32.80:258,33,0	1/1:12,0:12:16.15:140,16,0	1/1:6,0:6:14.93:120,15,0	1/1:11,7:19:56.43:500,56,0	1/1:6,16:24:57:544,57,0	1/1:4,4:9:20.99:203,21,0	1/1:10,1:11:22.93:153,23,0	1/1:10,0:10:13.45:78,13,0	1/1:6,0:6:5.97:55,6,0	1/1:10,0:10:27.60:177,28,0	1/1:16,0:16:46.15:320,46,0	1/1:9,14:23:64.69:542,65,0	0/1:7,0:7:16.73:39,0,17
chr10	30944469	.	TAAACAAAC	T	13475.77	PASS	AB=0.578;AC=47;AF=0.839;AN=56;BaseQRankSum=7.927;DP=448;FS=13.434;HRun=0;HaplotypeScore=145.6018;InbreedingCoeff=0.7117;MQ=52.19;MQ0=2;MQRankSum=-9.930;QD=36.72;ReadPosRankSum=3.159;VQSLOD=3.9957;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,7:12:15.05:348,15,0	1/1:1,4:5:9.03:210,9,0	0/0:16,0:13:38.61:0,39,1066	0/0:22,0:17:36.03:0,36,907	1/1:8,12:20:26.36:585,26,0	1/1:7,16:23:45.15:1069,45,0	1/1:5,10:15:9.03:233,9,0	1/1:12,7:19:17.95:387,18,0	0/0:25,0:25:57.20:0,57,2260	1/1:9,13:22:57.19:1379,57,0	1/1:12,3:15:0.54:308,1,0	1/1:2,9:11:18.06:467,18,0	1/1:8,13:21:30.10:753,30,0	1/1:3,21:24:39.13:970,39,0	0/0:18,0:18:48.16:0,48,1885	0/1:7,19:24:71.59:1225,0,72	1/1:3,8:11:12.04:284,12,0	1/1:7,2:9:9.03:219,9,0	1/1:12,4:15:12.04:311,12,0	1/1:11,5:16:24.08:552,24,0	1/1:3,0:3:3.01:34,3,0	1/1:8,5:13:12.04:244,12,0	1/1:4,8:12:21.07:464,21,0	1/1:5,3:8:15.02:254,15,0	1/1:2,6:8:15.05:389,15,0	1/1:10,10:20:45.15:1039,45,0	1/1:6,15:21:36.12:915,36,0	1/1:2,15:16:33.11:835,33,0
chr10	30944488	.	A	AGGAAT	4693.94	PASS	AB=0.985;AC=39;AF=0.696;AN=56;BaseQRankSum=11.023;DP=393;FS=3.605;HRun=0;HaplotypeScore=166.1034;InbreedingCoeff=0.2003;MQ=57.02;MQ0=3;MQRankSum=-10.079;QD=15.70;ReadPosRankSum=6.712;VQSLOD=4.2170;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:11,0:11:33.95:112,0,34	1/1:5,0:5:8.99:95,9,0	0/0:23,0:18:49.96:0,50,1008	0/0:26,0:22:56.73:0,57,1090	1/1:15,1:16:31.97:290,32,0	1/1:19,0:19:36.57:317,37,0	0/1:12,0:12:39.01:55,0,39	0/1:11,0:11:99:114,0,129	0/0:25,0:25:75.25:0,75,1702	0/1:19,0:21:28.56:348,0,29	1/1:7,2:8:17.83:172,18,0	1/1:12,0:12:20.40:170,20,0	1/1:15,0:15:29.88:233,30,0	1/1:22,0:22:41.74:333,42,0	0/0:20,0:20:60.20:0,60,1333	0/1:20,1:20:18.62:354,0,19	0/1:10,0:10:37.95:66,0,38	0/1:7,0:7:38.22:102,0,38	0/1:9,0:9:80.04:80,0,116	1/1:14,0:14:23.25:265,23,0	1/1:1,0:1:3.01:34,3,0	0/1:6,0:6:39.26:72,0,39	1/1:10,0:10:23.95:233,24,0	1/1:9,0:9:6.72:48,7,0	1/1:6,0:6:14.94:115,15,0	1/1:16,0:16:46.39:446,46,0	1/1:19,1:20:44.37:386,44,0	1/1:17,0:16:32.77:254,33,0
chr10	30944507	.	A	ACTGATT	3845.22	PASS	AB=0.633;AC=36;AF=0.750;AN=48;BaseQRankSum=9.054;DP=160;FS=4.726;HRun=0;HaplotypeScore=83.8153;InbreedingCoeff=0.3670;MQ=83.76;MQ0=1;MQRankSum=-8.696;QD=71.21;ReadPosRankSum=6.089;VQSLOD=3.6118;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,1:1:3.01:105,3,0	1/1:0,1:1:3.01:106,3,0	0/0:25,0:21:60.20:0,60,1429	0/0:33,0:32:89.64:0,90,2076	1/1:1,2:3:9.03:311,9,0	1/1:3,3:6:1.47:204,1,0	./.	0/0:2,0:2:0:0,0,0	0/0:26,0:26:78.27:0,78,1940	1/1:1,1:2:3:109,3,0	1/1:4,3:6:12.01:335,12,0	1/1:0,3:3:9.03:317,9,0	1/1:1,1:2:2.99:105,3,0	1/1:2,1:3:2.28:104,2,0	0/0:19,0:19:54.19:0,54,1353	1/1:2,0:2:2.34:104,2,0	1/1:0,1:1:3.01:105,3,0	1/1:0,1:1:3.01:109,3,0	./.	1/1:1,4:5:15.05:514,15,0	./.	1/1:2,0:2:3.01:62,3,0	1/1:0,2:2:3.01:104,3,0	1/1:0,1:1:3.01:104,3,0	./.	1/1:0,4:4:12.04:434,12,0	0/1:2,4:6:4.44:513,0,4	0/1:1,1:2:19.99:101,0,20
chr10	30944509	.	C	CCTTAAGAAAACTAGCCGAGCA	47108.13	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=9.453;DP=347;FS=2.177;HRun=0;HaplotypeScore=217.4821;InbreedingCoeff=0.8964;MQ=60.99;MQ0=1;MQRankSum=-12.651;QD=190.72;ReadPosRankSum=4.636;VQSLOD=5.0261;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,1:13:27.09:2075,27,0	1/1:6,1:7:15.05:1353,15,0	0/0:23,0:19:56.22:0,56,2349	0/0:34,0:33:93.31:0,93,3776	1/1:9,2:11:24.07:1884,24,0	1/1:11,3:14:30.10:2361,30,0	1/1:7,0:7:18.06:1467,18,0	1/1:26,0:26:75.25:4327,75,0	0/0:25,0:25:75.26:0,75,3848	1/1:9,1:10:27.06:1683,27,0	1/1:8,3:10:30.10:2034,30,0	1/1:10,3:13:39.13:3099,39,0	1/1:13,1:14:36.12:2909,36,0	1/1:12,1:13:33.58:2642,34,0	0/0:18,0:18:51.18:0,51,2644	1/1:11,0:11:30.10:1898,30,0	1/1:10,1:11:27.09:2092,27,0	1/1:8,1:9:21.05:1643,21,0	1/1:6,0:6:15.05:1001,15,0	1/1:9,4:14:36.12:3302,36,0	1/1:9,0:9:18.06:1517,18,0	1/1:6,0:6:9.03:835,9,0	1/1:3,2:5:9.03:633,9,0	1/1:3,1:4:6.02:595,6,0	1/1:6,0:6:15.05:1203,15,0	1/1:9,4:13:39.12:3180,39,0	1/1:8,4:12:36.12:3001,36,0	1/1:1,1:2:6.02:375,6,0
chr10	30944824	.	GAGCTCCA	G	13132.10	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=8.433;DP=441;FS=24.889;HRun=0;HaplotypeScore=142.6589;InbreedingCoeff=0.8728;MQ=90.65;MQ0=0;MQRankSum=-11.459;QD=55.18;ReadPosRankSum=-0.864;VQSLOD=2.7212;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,8:13:12.04:308,12,0	1/1:0,3:3:6.02:154,6,0	0/0:26,0:25:1.21:0,1,1459	0/0:31,0:27:53.67:0,54,1690	1/1:1,12:13:20.75:481,21,0	1/1:2,10:12:27.09:692,27,0	1/1:3,9:12:27.09:692,27,0	1/1:7,22:30:69.17:1458,69,0	0/0:21,0:21:45.15:0,45,1716	1/1:3,13:16:48.16:1217,48,0	1/1:3,9:12:33.11:813,33,0	1/1:3,8:11:18.06:461,18,0	1/1:0,18:18:51.18:1307,51,0	1/1:1,12:13:33.11:846,33,0	0/0:18,0:18:54.17:0,54,1996	1/1:4,17:21:45.15:1153,45,0	1/1:1,7:8:21.07:531,21,0	1/1:1,4:5:12.04:308,12,0	0/0:27,0:27:69.24:0,69,2621	0/0:17,0:17:51.18:0,51,1867	0/0:26,0:26:72.25:0,72,2571	1/1:0,10:10:27.05:635,27,0	1/1:1,6:7:15.05:384,15,0	1/1:2,7:9:3.01:76,3,0	1/1:1,12:13:27.09:692,27,0	1/1:0,11:11:33.11:846,33,0	0/0:37,0:37:99:0,102,3877	1/1:0,1:1:3.01:77,3,0
chr10	30944849	.	CAGAGAGAGAGAGAGAGAG	C	1467.48	PASS	AB=1.000;AC=7;AF=0.130;AN=54;BaseQRankSum=2.316;DP=483;FS=1.145;HRun=0;HaplotypeScore=262.3687;InbreedingCoeff=0.6016;MQ=69.51;MQ0=10;MQRankSum=-3.191;QD=14.39;ReadPosRankSum=2.481;VQSLOD=2.4402;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:13:12.04:0,12,958	0/0:4,0:4:5.17:0,5,172	0/0:33,0:17:6.48:0,6,126	0/1:44,0:21:0.04:0,0,0	0/0:17,0:17:8.92:0,9,665	0/0:12,0:12:10.77:0,11,447	0/0:12,0:12:6.02:0,6,504	0/0:23,0:23:32.66:0,33,1215	0/0:17,0:24:27.09:0,27,1864	0/0:18,0:21:45.15:0,45,1989	0/0:10,0:11:3.01:0,3,163	0/0:15,0:16:24.08:0,24,1734	0/0:21,0:20:24.04:0,24,1211	0/0:16,0:19:30.10:0,30,1932	0/0:24,0:25:39.12:0,39,2682	0/0:21,0:25:42.14:0,42,3198	0/0:7,0:7:15.05:0,15,854	0/0:6,0:8:19.62:0,20,1322	1/1:12,0:12:2.99:26,3,0	1/1:9,3:12:12.04:584,12,0	./.	0/0:13,0:13:6.02:0,6,469	0/0:8,0:9:6.02:0,6,400	0/0:12,0:14:20.48:0,20,1565	0/0:11,0:11:3.01:0,3,215	0/0:14,0:16:31.35:0,31,1819	1/1:23,9:34:21.07:981,21,0	0/0:4,0:2:6.02:0,6,431
chr10	30944919	.	AAGATACATAGAT	A	8258.84	PASS	AB=1.000;AC=35;AF=0.673;AN=52;BaseQRankSum=12.397;DP=468;FS=2.134;HRun=0;HaplotypeScore=178.5625;InbreedingCoeff=0.8539;MQ=59.52;MQ0=0;MQRankSum=-7.396;QD=33.71;ReadPosRankSum=0.637;VQSLOD=4.4648;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,13:18:9.46:165,9,0	1/1:2,4:6:15.05:402,15,0	0/0:31,0:27:42.61:0,43,1572	0/0:18,0:18:41.64:0,42,1266	./.	1/1:4,6:10:12.04:428,12,0	1/1:3,4:7:2.97:20,3,0	1/1:13,20:33:60.13:1101,60,0	0/0:23,0:23:66.22:0,66,3450	1/1:31,0:31:27.30:633,27,0	1/1:18,0:18:2.97:20,3,0	1/1:8,7:15:33.11:915,33,0	1/1:2,6:8:12.04:429,12,0	1/1:6,7:13:27.06:803,27,0	0/0:33,0:33:78.19:0,78,3938	1/1:10,5:15:33.11:728,33,0	./.	1/1:4,1:5:9.03:273,9,0	0/0:17,0:16:36.12:0,36,1615	0/0:26,0:26:63.22:0,63,3323	0/0:20,0:20:39.13:0,39,2072	0/1:19,0:19:0:0,0,0	1/1:3,5:8:15.05:451,15,0	1/1:9,0:9:5.87:40,6,0	1/1:1,7:8:18.06:545,18,0	1/1:11,6:17:39.13:983,39,0	0/0:30,0:30:63.22:0,63,3081	1/1:2,3:5:9.03:322,9,0
chr10	30944926	.	ATAGATAGATACATAGATACAAAGATAAATACATTGC	A	11418.07	PASS	AB=0.514;AC=35;AF=0.648;AN=54;BaseQRankSum=11.907;DP=449;FS=1.447;HRun=0;HaplotypeScore=336.3030;InbreedingCoeff=0.8308;MQ=59.75;MQ0=1;MQRankSum=-6.254;QD=51.90;ReadPosRankSum=-0.781;VQSLOD=2.6695;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:15:8.40:240,8,0	1/1:6,0:6:15.05:513,15,0	0/0:36,0:29:60.20:0,60,2036	0/0:18,0:18:41.54:0,42,1259	0/0:0,22:22:0:0,0,0	1/1:8,0:8:12.04:521,12,0	1/1:7,0:7:3.01:58,3,0	1/1:27,0:27:60.17:1481,60,0	0/0:23,0:23:69.23:0,69,6176	1/1:4,30:34:54.04:1673,54,0	1/1:0,18:18:2.92:37,3,0	1/1:13,0:13:33.11:1080,33,0	1/1:6,0:6:12.04:539,12,0	1/1:11,0:11:27.09:959,27,0	0/0:29,0:29:81.20:0,81,6081	1/1:13,0:13:33.11:904,33,0	./.	1/1:4,0:4:9.03:341,9,0	0/0:20,0:19:48.16:0,48,3052	0/0:28,0:28:72.25:0,72,6030	0/0:22,0:22:48.16:0,48,4032	0/1:1,18:19:0.01:0,0,0	1/1:6,0:6:15.05:537,15,0	1/1:7,0:7:5.57:40,6,0	1/1:7,0:7:18.06:672,18,0	1/1:14,0:14:39.13:1274,39,0	0/0:29,0:29:66.23:0,66,6059	1/1:5,0:5:9.03:549,9,0
chr10	30944949	.	GATAA	G	1009.79	PASS	AB=0.758;AC=20;AF=0.357;AN=56;BaseQRankSum=7.072;DP=414;FS=0.569;HRun=0;HaplotypeScore=150.1245;InbreedingCoeff=0.0141;MQ=50.75;MQ0=2;MQRankSum=-7.899;QD=6.64;ReadPosRankSum=-4.285;VQSLOD=1.5060;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:12,5:17:48.14:62,0,48	0/1:4,1:5:4.68:5,0,6	0/0:25,0:16:48.16:0,48,1121	0/0:12,0:12:30.10:0,30,772	0/0:22,0:22:0:0,0,0	1/1:5,6:11:2.35:145,2,0	0/1:1,1:2:5.89:6,0,55	0/0:23,0:23:58.25:0,58,909	0/0:23,0:23:66.23:0,66,1745	1/1:30,0:30:0.55:241,1,0	0/0:18,0:18:2.99:0,3,23	0/1:7,6:13:12.07:86,0,12	0/1:6,3:9:10.50:32,0,11	0/1:8,2:10:26.32:26,0,38	0/0:22,0:22:60.21:0,60,1558	0/1:5,1:6:10.93:18,0,11	0/1:2,1:3:5.20:5,0,11	1/1:2,2:4:4.71:89,5,0	0/0:19,0:19:51.10:0,51,1268	0/0:29,0:29:84.25:0,84,2179	0/0:23,0:23:60.21:0,60,1603	0/0:18,0:18:0:0,0,0	0/1:5,3:9:5.64:18,0,6	1/1:2,2:4:2.89:21,3,0	0/1:7,2:9:9.84:26,0,10	0/1:7,9:16:47.45:358,0,47	0/0:28,0:28:72.21:0,72,1882	0/1:3,1:4:10.22:22,0,10
chr10	30944958	.	ATTGC	A	1947.49	PASS	AB=0.771;AC=19;AF=0.339;AN=56;BaseQRankSum=6.408;DP=405;FS=0.551;HRun=0;HaplotypeScore=147.0365;InbreedingCoeff=-0.1989;MQ=54.22;MQ0=1;MQRankSum=-6.423;QD=11.73;ReadPosRankSum=-2.328;VQSLOD=3.0564;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:5,5:10:77.98:204,0,78	0/1:4,1:5:24.69:25,0,74	0/0:26,0:20:57.17:0,57,1327	0/0:11,0:11:30.06:0,30,748	0/0:22,0:22:0:0,0,0	0/1:4,6:10:87.66:255,0,88	0/1:1,1:2:28.03:28,0,57	0/0:20,0:20:57.88:0,58,1060	0/0:25,0:25:75.26:0,75,2085	0/1:30,0:30:55.34:367,0,55	0/1:18,0:18:0.09:0,0,0	0/1:8,6:14:99:214,0,157	0/1:5,3:8:94.88:95,0,134	0/1:10,2:12:60.87:61,0,75	0/0:19,0:19:57.17:0,57,1442	0/1:6,1:7:38.04:38,0,141	1/1:2,1:3:5.91:54,6,0	0/1:2,2:4:68.01:87,0,68	0/0:18,0:18:51.16:0,51,1310	0/0:27,0:27:78.27:0,78,2158	0/0:26,0:26:63.22:0,63,1746	0/0:18,0:18:0:0,0,0	0/1:6,4:10:40.67:140,0,41	1/1:3,2:5:2.92:50,3,0	0/1:6,2:8:61.42:67,0,61	0/1:7,9:16:99:377,0,191	0/0:27,0:27:75.22:0,75,1996	0/1:3,1:4:40.90:41,0,142
chr10	30945823	.	AGAAG	A	2063.58	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=-0.058;DP=517;FS=4.674;HRun=0;HaplotypeScore=106.7015;InbreedingCoeff=0.7727;MQ=55.11;MQ0=8;MQRankSum=4.768;QD=19.29;ReadPosRankSum=2.060;VQSLOD=3.3941;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:17:13.29:0,13,223	0/0:2,0:8:21.07:0,21,323	0/0:28,0:17:9.50:0,9,144	0/1:25,0:14:2.97:3,0,109	0/0:18,0:27:33.08:0,33,510	0/0:16,0:26:30.10:0,30,503	0/0:15,0:19:30.10:0,30,452	0/0:22,0:23:34.75:0,35,660	0/0:22,0:22:45.14:0,45,995	0/0:16,0:16:30.10:0,30,654	0/0:13,0:13:21.07:0,21,444	0/0:7,0:19:24.08:0,24,413	0/0:7,0:18:21.07:0,21,353	0/0:7,0:18:15.04:0,15,272	0/0:16,0:16:36.12:0,36,850	0/0:7,0:16:24.55:0,25,428	0/0:11,0:12:2.90:0,3,38	0/0:9,0:13:3.71:0,4,166	1/1:5,10:15:30.09:444,30,0	1/1:7,12:19:39.07:568,39,0	1/1:2,22:23:42.14:676,42,0	0/0:4,0:13:30:0,30,459	0/0:11,0:21:30.49:0,30,492	0/0:10,0:18:9.01:0,9,135	0/0:6,0:17:18.06:0,18,311	0/0:11,0:23:38.05:0,38,621	1/1:7,17:23:33.11:531,33,0	0/0:6,0:6:6.02:0,6,108
chr10	30946064	.	TAAAAAAAAA	T	2032.99	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=6.777;DP=351;FS=8.775;HRun=19;HaplotypeScore=94.7343;InbreedingCoeff=0.8620;MQ=65.96;MQ0=0;MQRankSum=-6.691;QD=36.96;ReadPosRankSum=5.355;VQSLOD=-0.0520;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:25:56:0,56,1855	0/0:2,0:3:9.03:0,9,318	0/0:16,0:10:20.74:0,21,671	0/0:11,0:6:6.91:0,7,106	0/0:14,0:19:39.50:0,39,1099	0/0:12,0:14:36.12:0,36,1331	0/0:9,0:13:27.09:0,27,966	0/0:19,0:20:44.93:0,45,1640	0/0:8,0:8:21.07:0,21,870	0/0:10,0:11:22.89:0,23,599	0/0:5,0:5:6.02:0,6,239	0/0:16,0:16:36.11:0,36,1323	0/0:15,0:15:36.12:0,36,1386	0/0:7,0:9:18.06:0,18,666	0/0:13,0:17:36.12:0,36,1461	0/0:4,0:6:18.06:0,18,708	0/0:20,0:22:51.18:0,51,2091	0/0:3,0:3:9.03:0,9,340	1/1:5,6:11:17.74:366,18,0	1/1:3,10:13:20.47:492,20,0	1/1:3,4:7:5.76:106,6,0	0/0:8,0:9:18.06:0,18,714	0/0:11,0:11:21.07:0,21,736	0/0:10,0:14:27.09:0,27,997	0/0:7,0:7:15.05:0,15,511	0/0:4,0:5:12.04:0,12,429	1/1:2,22:23:54.11:1220,54,0	0/0:10,0:13:30.10:0,30,1033
chr10	30946356	.	G	GATATAGAT	2367.24	PASS	AB=1.000;AC=29;AF=0.690;AN=42;BaseQRankSum=0.981;DP=179;FS=3.217;HRun=0;HaplotypeScore=62.1054;InbreedingCoeff=0.3022;MQ=101.56;MQ0=5;MQRankSum=-2.183;QD=14.89;ReadPosRankSum=1.149;VQSLOD=1.8961;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:3,4:8:3.01:127,3,0	1/1:1,1:2:3.01:128,3,0	0/1:19,0:10:7.26:7,0,34	0/1:46,0:26:1:1,0,80	1/1:1,0:1:3:26,3,0	1/1:0,2:2:3.01:124,3,0	./.	1/1:26,0:25:30.02:364,30,0	0/0:2,0:2:6.02:0,6,120	1/1:3,0:4:6.01:108,6,0	./.	./.	./.	1/1:1,0:1:3.01:40,3,0	0/0:1,0:1:3:0,3,25	1/1:0,2:2:6.02:252,6,0	1/1:11,0:11:9:194,9,0	1/1:12,0:12:15.04:213,15,0	0/1:7,0:6:7.84:19,0,8	0/0:4,0:4:2.88:0,3,15	0/0:2,0:2:2.90:0,3,16	./.	./.	./.	1/1:1,4:6:6.02:255,6,0	1/1:1,1:2:3.01:128,3,0	0/0:7,0:7:1.85:0,2,48	1/1:1,8:9:12.04:511,12,0
chr10	30946362	.	G	GAT	295.77	PASS	AB=0.897;AC=17;AF=0.405;AN=42;BaseQRankSum=3.074;DP=175;FS=0.000;HRun=0;HaplotypeScore=58.0288;InbreedingCoeff=0.1883;MQ=102.52;MQ0=5;MQRankSum=-2.458;QD=2.96;ReadPosRankSum=1.095;VQSLOD=1.2615;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:6,0:6:19.64:20,0,35	1/1:2,0:2:3:27,3,0	0/1:20,0:12:0.40:0,0,79	0/0:45,0:25:2.81:0,3,69	0/0:1,0:1:3.01:0,3,37	1/1:2,0:2:3.01:36,3,0	./.	0/1:25,1:25:9.73:10,0,283	0/0:2,0:2:6.02:0,6,82	0/0:4,0:4:6.90:0,7,74	./.	./.	./.	0/0:1,0:1:2.04:0,2,6	0/0:1,0:1:3:0,3,25	1/1:2,0:2:5.68:38,6,0	0/1:10,1:11:15.98:16,0,18	0/1:6,6:13:69.26:89,0,69	0/0:7,0:6:18.05:0,18,218	0/0:4,0:4:3.01:0,3,41	0/0:1,0:1:3.01:0,3,41	./.	./.	./.	1/1:5,1:6:6.01:55,6,0	1/1:2,0:2:3:28,3,0	0/0:4,0:4:12.02:0,12,138	1/1:9,0:9:12.01:110,12,0
chr10	30946367	.	AGATATG	A	978.62	PASS	AB=0.929;AC=16;AF=0.400;AN=40;BaseQRankSum=-5.409;DP=170;FS=6.013;HRun=0;HaplotypeScore=62.2404;InbreedingCoeff=0.1398;MQ=105.50;MQ0=5;MQRankSum=1.675;QD=9.89;ReadPosRankSum=-3.689;VQSLOD=0.1443;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:5,0:5:11.24:39,0,11	0/0:2,0:2:3.01:0,3,44	0/1:20,0:12:10.85:11,0,104	0/0:46,0:25:19.36:0,19,212	0/0:1,0:1:3:0,3,27	0/0:2,0:2:2.50:0,2,9	./.	1/1:7,19:25:54.07:684,54,0	0/0:2,0:2:6.02:0,6,172	0/1:1,3:4:7.62:40,0,8	./.	./.	./.	1/1:1,0:1:3.01:66,3,0	./.	0/0:2,0:2:5.95:0,6,56	1/1:10,0:10:5.97:67,6,0	1/1:11,0:11:14.25:166,14,0	0/1:8,0:7:5.27:5,0,173	1/1:4,0:4:0.47:1,0,0	0/0:1,0:1:2.90:0,3,16	./.	./.	./.	0/0:6,0:6:6.02:0,6,79	0/1:2,0:2:20.98:21,0,34	0/0:4,0:4:8.89:0,9,77	0/1:8,0:8:9.96:10,0,126
chr10	30946376	.	T	TATAG	444.73	PASS	AB=0.902;AC=12;AF=0.333;AN=36;BaseQRankSum=3.679;DP=176;FS=17.376;HRun=0;HaplotypeScore=69.4308;InbreedingCoeff=0.0319;MQ=112.09;MQ0=4;MQRankSum=-3.308;QD=4.73;ReadPosRankSum=1.704;VQSLOD=0.3136;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:7:9.89:0,10,128	1/1:2,0:2:2.98:21,3,0	0/0:19,0:12:10.79:0,11,167	0/1:52,0:31:16.27:16,0,208	0/0:1,0:1:3.01:0,3,57	0/1:4,0:4:8.76:9,0,45	./.	0/0:23,0:22:57.13:0,57,842	0/0:3,0:3:9.03:0,9,171	0/0:4,0:4:9.01:0,9,132	./.	./.	./.	0/0:1,0:1:3.01:0,3,34	./.	1/1:2,0:2:5.85:35,6,0	0/0:8,0:8:5.81:0,6,85	0/0:9,0:9:15.05:0,15,230	0/1:6,4:9:93.27:268,0,93	./.	./.	./.	./.	./.	1/1:7,0:7:5.97:43,6,0	0/1:2,0:2:15.68:16,0,45	0/1:2,1:3:21.56:90,0,22	0/1:8,0:8:36:72,0,36
chr10	30946385	.	ATTC	A	115.95	PASS	AB=0.825;AC=4;AF=0.100;AN=40;BaseQRankSum=2.680;DP=178;FS=5.020;HRun=0;HaplotypeScore=68.6944;InbreedingCoeff=-0.1889;MQ=120.88;MQ0=1;MQRankSum=-0.991;QD=3.31;ReadPosRankSum=-1.796;VQSLOD=1.1484;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:7:0.24:0,0,236	0/0:2,0:2:5.84:0,6,41	0/1:17,1:15:1.28:1,0,137	0/0:58,0:34:17.15:0,17,259	0/0:2,0:2:3.01:0,3,71	0/1:4,0:4:22.80:23,0,148	./.	0/0:25,0:25:66.23:0,66,1559	0/0:3,0:3:9.03:0,9,213	0/0:4,0:4:9.03:0,9,213	0/0:1,0:1:2.92:0,3,17	./.	./.	0/0:1,0:1:3.01:0,3,71	./.	0/0:2,0:2:6.02:0,6,141	0/0:8,0:8:11.94:0,12,198	0/0:6,0:7:15.05:0,15,354	0/1:6,5:10:99:152,0,327	0/0:3,0:3:3.01:0,3,39	./.	./.	./.	./.	0/0:6,0:6:8.96:0,9,120	0/0:2,0:2:6.02:0,6,133	0/1:1,1:2:32.68:33,0,65	0/0:7,0:7:15.05:0,15,342
chr10	30946447	.	CAT	C	405.15	PASS	AC=8;AF=0.182;AN=44;BaseQRankSum=-3.239;DP=96;FS=0.000;HRun=0;HaplotypeScore=26.8746;InbreedingCoeff=0.5260;MQ=82.84;MQ0=0;MQRankSum=1.059;QD=28.94;ReadPosRankSum=-0.369;VQSLOD=3.8141;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:5:12:0,12,111	0/0:2,0:2:3.01:0,3,35	0/0:8,0:6:8.75:0,9,61	0/0:7,0:6:7.49:0,7,64	0/0:1,0:1:2.92:0,3,17	0/0:2,0:2:6.01:0,6,59	0/0:3,0:3:3.01:0,3,33	0/0:16,0:16:33.03:0,33,319	0/0:2,0:2:3.01:0,3,52	0/0:2,0:2:6:0,6,56	0/0:2,0:2:6.02:0,6,81	./.	./.	0/0:2,0:2:3.01:0,3,33	0/0:3,0:3:9.03:0,9,156	./.	0/0:8,0:6:8.77:0,9,65	0/0:6,0:6:12.03:0,12,142	1/1:0,7:7:21.06:269,21,0	1/1:0,2:2:5.99:61,6,0	1/1:0,2:2:6.02:81,6,0	./.	0/0:1,0:1:3.01:0,3,33	./.	0/0:6,0:6:15.04:0,15,167	./.	1/1:0,3:3:9.03:122,9,0	0/0:5,0:5:9.02:0,9,94
chr10	30946455	.	T	TA	1078.91	PASS	AC=28;AF=0.636;AN=44;BaseQRankSum=-3.728;DP=76;FS=2.591;HRun=1;HaplotypeScore=17.8143;InbreedingCoeff=0.6228;MQ=80.34;MQ0=0;MQRankSum=-4.296;QD=24.52;ReadPosRankSum=0.706;VQSLOD=3.4730;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,2:4:12.02:147,12,0	1/1:0,1:1:3.01:35,3,0	0/0:4,0:4:11.02:0,11,89	0/0:6,0:5:5.02:0,5,85	1/1:0,1:1:2.92:17,3,0	1/1:0,2:2:6.02:82,6,0	1/1:0,2:2:3.01:37,3,0	1/1:1,8:9:21.04:237,21,0	0/0:1,0:1:3.01:0,3,38	1/1:0,1:1:3.01:39,3,0	1/1:0,2:2:5.93:53,6,0	./.	./.	1/1:0,1:1:3.01:37,3,0	0/0:3,0:3:9.03:0,9,126	./.	1/1:1,6:5:6.02:73,6,0	1/1:1,3:4:12.01:137,12,0	0/0:7,0:7:20.26:0,20,121	0/0:4,0:4:8.86:0,9,72	0/0:2,0:2:5.75:0,6,31	./.	1/1:0,1:1:3.01:37,3,0	./.	1/1:1,5:6:15.05:185,15,0	./.	0/0:5,0:5:14.64:0,15,118	1/1:0,3:3:9.03:117,9,0
chr10	30946650	.	A	AT	2642.49	PASS	AC=28;AF=0.778;AN=36;BaseQRankSum=-2.395;DP=248;FS=0.000;HRun=7;HaplotypeScore=31.0399;InbreedingCoeff=0.6768;MQ=58.92;MQ0=4;MQRankSum=-0.731;QD=17.98;ReadPosRankSum=0.354;VQSLOD=2.4540;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:8,0:2:6.01:0,6,58	0/0:15,0:9:26.88:0,27,233	1/1:10,0:10:3.45:22,3,0	./.	1/1:3,0:3:2.97:20,3,0	1/1:16,0:16:37.05:236,37,0	0/0:6,0:6:18.03:0,18,174	1/1:9,0:9:25.80:207,26,0	./.	./.	./.	./.	0/0:22,0:22:63.09:0,63,603	./.	1/1:12,0:12:5.94:41,6,0	./.	1/1:5,15:20:48.15:576,48,0	1/1:0,12:12:36.11:435,36,0	1/1:1,16:17:36.11:435,36,0	1/1:0,0:1:2.04:6,2,0	1/1:7,0:7:2.97:20,3,0	./.	1/1:8,0:8:2.97:20,3,0	1/1:7,0:7:17.88:138,18,0	1/1:1,21:22:51.16:616,51,0	1/1:0,0:2:2.22:7,2,0
chr10	30946651	.	T	TA	1873.52	PASS	AC=28;AF=0.667;AN=42;BaseQRankSum=1.148;DP=255;FS=0.000;HRun=1;HaplotypeScore=34.5033;InbreedingCoeff=0.5970;MQ=58.93;MQ0=4;MQRankSum=-2.091;QD=12.49;ReadPosRankSum=0.925;VQSLOD=1.9848;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:3,4:6:0:0,0,0	./.	0/0:8,0:2:6.02:0,6,78	0/0:15,0:9:26.26:0,26,315	1/1:0,10:10:2.48:44,2,0	./.	1/1:0,3:3:3.01:45,3,0	1/1:3,14:16:42.12:554,42,0	0/0:6,0:6:18.06:0,18,251	1/1:1,9:9:27.09:387,27,0	0/0:0,9:9:0:0,0,0	./.	0/0:1,7:8:0:0,0,0	./.	0/0:22,0:22:63.21:0,63,857	./.	1/1:0,12:12:6.01:90,6,0	./.	1/1:20,0:20:17.28:123,17,0	1/1:12,0:12:30.62:122,31,0	1/1:17,0:17:7.57:93,8,0	1/1:1,0:1:3.01:30,3,0	1/1:0,7:7:3:45,3,0	./.	1/1:0,10:10:3:45,3,0	1/1:0,7:7:18.06:268,18,0	1/1:22,0:22:18.89:132,19,0	1/1:2,0:2:3.01:30,3,0
chr10	30948986	.	CA	C	3015.84	PASS	AB=0.515;AC=7;AF=0.125;AN=56;BaseQRankSum=-0.276;DP=697;FS=0.000;HRun=1;HaplotypeScore=116.8666;InbreedingCoeff=0.8711;MQ=84.39;MQ0=0;MQRankSum=-2.817;QD=35.48;ReadPosRankSum=2.265;VQSLOD=3.3894;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,165,2481	0/0:13,0:13:39.13:0,39,619	0/0:27,0:27:81.21:0,81,1150	0/0:27,1:27:74.71:0,75,1154	0/0:23,0:23:69.24:0,69,1094	0/0:26,0:25:78.22:0,78,1210	0/0:30,0:30:87.28:0,87,1357	0/0:30,0:30:87.25:0,87,1305	0/0:17,0:17:50.84:0,51,662	0/0:34,0:34:99:0,102,1602	0/0:11,0:11:33.11:0,33,519	0/0:36,0:36:99:0,102,1579	0/0:25,0:25:75.24:0,75,1167	0/0:28,0:28:84.26:0,84,1294	0/0:27,0:27:81.20:0,81,1167	0/0:25,0:25:75.23:0,75,1150	0/0:33,0:33:99:0,99,1527	0/0:16,0:16:45.14:0,45,690	1/1:0,6:6:18.06:250,18,0	0/1:1,16:17:5.73:499,0,6	1/1:0,35:35:99:1416,102,0	0/0:19,0:19:57.18:0,57,881	0/0:27,0:27:81.25:0,81,1244	0/0:34,0:34:99:0,99,1547	0/0:22,0:22:66.21:0,66,1027	0/0:18,0:18:51.17:0,51,813	1/1:0,27:27:72.07:999,72,0	0/0:8,0:8:24.08:0,24,382
chr10	30950549	.	C	CCCTG	34704.11	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-8.692;DP=641;FS=3.288;HRun=0;HaplotypeScore=97.2106;InbreedingCoeff=0.9962;MQ=79.53;MQ0=0;MQRankSum=-9.807;QD=63.21;ReadPosRankSum=4.329;VQSLOD=7.0359;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:9,40:52:99:2904,111,0	1/1:1,7:8:21.07:566,21,0	0/0:27,0:27:66.09:0,66,1192	0/0:19,0:19:51.08:0,51,838	1/1:4,29:36:87.30:2182,87,0	1/1:3,17:21:51.18:1264,51,0	1/1:3,18:22:39.13:1052,39,0	1/1:8,22:31:78.27:2084,78,0	0/0:23,0:23:66.23:0,66,1238	1/1:4,22:26:72.25:1889,72,0	1/1:1,16:17:42.14:1091,42,0	1/1:3,12:16:42.14:1054,42,0	1/1:0,9:9:27.09:729,27,0	1/1:4,17:21:54.19:1408,54,0	0/0:22,0:22:60.21:0,60,1119	1/1:5,23:29:75.20:1865,75,0	1/1:1,22:23:51.18:1352,51,0	1/1:1,10:12:33.11:890,33,0	1/1:4,14:20:57.15:1292,57,0	1/1:6,14:20:51.17:1281,51,0	1/1:3,27:30:69.24:1845,69,0	1/1:4,20:24:57.20:1467,57,0	1/1:2,25:29:75.04:1949,75,0	1/1:2,14:17:39.13:999,39,0	1/1:3,16:21:36.01:945,36,0	1/1:3,26:29:81.26:2053,81,0	1/1:3,26:30:81.22:2058,81,0	1/1:0,6:6:18.06:485,18,0
chr10	30950600	.	GA	G	1324.86	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.739;DP=629;FS=1.291;HRun=3;HaplotypeScore=113.9991;InbreedingCoeff=0.9985;MQ=89.75;MQ0=0;MQRankSum=-2.634;QD=32.31;ReadPosRankSum=-0.489;VQSLOD=2.8852;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,138,1869	0/0:10,0:10:30.10:0,30,427	0/0:29,0:29:77.80:0,78,1043	0/0:22,0:22:56.85:0,57,728	0/0:31,0:31:87.28:0,87,1232	0/0:21,0:21:54.18:0,54,776	0/0:22,0:22:60.20:0,60,864	0/0:29,0:28:84.22:0,84,1152	0/0:27,0:27:78.25:0,78,1106	1/1:1,25:26:75.23:927,75,0	1/1:1,14:15:42.13:520,42,0	0/0:16,0:16:39.06:0,39,536	0/0:13,0:13:36.12:0,36,518	0/0:21,0:21:57.19:0,57,817	0/0:25,0:25:75.24:0,75,1063	0/0:24,0:24:69.21:0,69,954	0/0:32,0:32:96.26:0,96,1321	0/0:17,0:17:48.14:0,48,671	0/0:24,0:24:69.23:0,69,978	0/0:13,0:13:39.13:0,39,559	0/0:22,0:22:63.21:0,63,907	0/0:19,0:19:54.17:0,54,755	0/0:29,0:29:77.85:0,78,1121	0/0:19,0:19:48.06:0,48,626	0/0:18,0:18:42.14:0,42,605	0/0:24,0:24:72.24:0,72,1037	0/0:21,0:21:60.20:0,60,860	0/0:8,0:8:24.08:0,24,343
chr10	30950743	.	AGT	A	4206.16	PASS	AB=0.895;AC=33;AF=0.635;AN=52;BaseQRankSum=0.456;DP=592;FS=5.435;HRun=0;HaplotypeScore=101.8616;InbreedingCoeff=0.6296;MQ=67.59;MQ0=9;MQRankSum=1.939;QD=10.93;ReadPosRankSum=3.867;VQSLOD=3.2292;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:29,11:40:7.23:347,7,0	0/1:11,0:10:26.62:43,0,27	./.	./.	1/1:13,10:24:35.92:370,36,0	0/1:14,11:26:11.02:214,0,11	1/1:22,9:30:20.64:224,21,0	0/1:31,0:31:0.01:0,0,0	0/0:11,0:18:3:0,3,26	0/0:14,0:14:11.92:0,12,123	0/0:7,0:12:6:0,6,52	1/1:11,7:17:18.05:194,18,0	1/1:6,6:13:20.89:208,21,0	1/1:9,9:21:38.57:355,39,0	0/0:14,0:16:20.99:0,21,208	1/1:12,6:19:14.87:144,15,0	1/1:16,9:25:27.07:292,27,0	1/1:11,9:24:44.44:407,44,0	0/0:17,0:16:4.22:0,4,23	0/0:21,0:20:0:0,0,0	0/0:23,0:23:3:0,3,25	1/1:15,9:24:28.25:345,28,0	1/1:5,7:12:14.91:162,15,0	1/1:13,7:20:30.06:314,30,0	1/1:9,8:17:18.05:194,18,0	1/1:8,11:19:30.06:313,30,0	0/0:21,0:21:13.47:0,13,86	1/1:4,5:10:8.86:79,9,0
chr10	30951117	.	A	AT	5149.41	PASS	AB=0.642;AC=36;AF=0.643;AN=56;BaseQRankSum=-7.875;DP=499;FS=0.000;HRun=13;HaplotypeScore=67.8734;InbreedingCoeff=0.3202;MQ=79.05;MQ0=0;MQRankSum=-1.193;QD=13.07;ReadPosRankSum=0.298;VQSLOD=5.0114;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,23:34:26.67:495,27,0	0/1:2,6:8:5.57:93,0,6	0/0:23,0:21:2.63:0,3,63	0/0:17,0:17:18.18:0,18,107	1/1:11,11:25:16.56:264,17,0	0/1:11,18:27:12.16:290,0,12	0/1:6,5:13:23.47:67,0,23	1/1:22,16:38:48.35:428,48,0	0/0:11,0:11:5.77:0,6,41	0/0:4,0:15:21.59:0,22,62	0/0:4,0:16:23.30:0,23,79	1/1:0,6:6:6.01:56,6,0	1/1:3,9:12:24.03:223,24,0	0/1:8,3:11:11.58:38,0,12	0/0:20,0:20:34.57:0,35,232	1/1:2,6:9:23.88:203,24,0	1/1:4,18:23:47.88:429,48,0	1/1:5,12:20:36.52:299,37,0	1/1:16,8:24:15.67:328,16,0	1/1:5,7:12:4.61:161,5,0	0/1:8,11:20:11.24:180,0,11	1/1:3,10:15:6.32:176,6,0	0/1:7,11:18:49.33:155,0,49	0/1:4,6:10:2.56:121,0,3	1/1:4,6:10:9.01:84,9,0	1/1:3,16:20:53.89:483,54,0	1/1:12,14:27:38.82:469,39,0	0/1:3,4:9:21.64:109,0,22
chr10	30951312	.	GC	G	1162.45	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.421;DP=566;FS=1.423;HRun=2;HaplotypeScore=56.5961;InbreedingCoeff=0.9996;MQ=81.51;MQ0=0;MQRankSum=-3.256;QD=35.23;ReadPosRankSum=-0.234;VQSLOD=3.7293;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:90.30:0,90,1345	0/0:10,0:10:30.10:0,30,450	0/0:16,0:16:45.11:0,45,634	0/0:14,0:14:42.14:0,42,618	0/0:23,0:23:69.23:0,69,1032	0/0:24,0:23:72.23:0,72,1059	0/0:20,0:20:60.19:0,60,879	0/0:23,0:23:57.18:0,57,834	0/0:25,0:25:75.25:0,75,1123	1/1:0,17:17:51.17:661,51,0	1/1:0,16:16:48.16:623,48,0	0/0:17,0:17:51.17:0,51,763	0/0:17,0:17:51.15:0,51,724	0/0:22,0:22:66.21:0,66,967	0/0:17,0:17:51.17:0,51,765	0/0:21,0:21:63.21:0,63,944	0/0:16,0:16:48.16:0,48,719	0/0:25,0:25:72.24:0,72,1079	0/0:30,0:30:90.27:0,90,1307	0/0:19,0:19:57.19:0,57,853	0/0:23,0:23:69.23:0,69,1034	0/0:22,0:22:66.21:0,66,964	0/0:25,0:25:75.25:0,75,1123	0/0:19,0:19:57.19:0,57,853	0/0:18,0:18:51.17:0,51,764	0/0:23,0:23:69.22:0,69,1012	0/0:22,0:22:66.22:0,66,989	0/0:11,0:11:33.11:0,33,494
chr10	30951874	.	ACCACAG	A	23374.20	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=14.752;DP=557;FS=5.891;HRun=0;HaplotypeScore=170.5493;InbreedingCoeff=0.9965;MQ=72.24;MQ0=0;MQRankSum=-15.875;QD=56.32;ReadPosRankSum=1.401;VQSLOD=4.9527;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,33:36:75.01:1745,75,0	1/1:0,8:8:20.74:504,21,0	0/0:10,0:10:30.09:0,30,922	0/0:21,0:21:50.75:0,51,1426	1/1:3,10:13:21.07:467,21,0	1/1:0,26:26:72.25:1697,72,0	1/1:1,19:20:57.19:1229,57,0	1/1:3,27:30:81.25:1831,81,0	0/0:39,0:39:99:0,108,3744	0/0:31,0:31:93.32:0,93,3214	0/0:12,0:12:36.08:0,36,1209	1/1:0,25:25:63.22:1513,63,0	1/1:0,20:20:51.18:1225,51,0	1/1:1,17:18:45.15:1081,45,0	0/0:29,0:29:84.25:0,84,2942	1/1:2,18:20:57.19:1332,57,0	1/1:3,20:23:47.77:1119,48,0	1/1:1,19:20:48.16:1119,48,0	1/1:1,13:14:39.09:840,39,0	1/1:0,9:9:27.09:613,27,0	1/1:2,10:12:23.84:501,24,0	1/1:4,18:22:42.14:953,42,0	1/1:1,13:14:30.10:663,30,0	1/1:2,14:16:33.11:741,33,0	1/1:0,14:14:33.11:756,33,0	1/1:1,19:20:57.08:1213,57,0	1/1:1,27:28:72.25:1729,72,0	1/1:1,6:7:21.07:503,21,0
chr10	30951875	.	CCACAG	C	11657.02	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=16.300;DP=550;FS=6.640;HRun=0;HaplotypeScore=201.1506;InbreedingCoeff=0.9962;MQ=71.68;MQ0=0;MQRankSum=-16.149;QD=28.43;ReadPosRankSum=1.577;VQSLOD=3.8031;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:35,1:36:74.89:878,75,0	1/1:8,0:8:20.69:253,21,0	0/0:10,0:10:30.09:0,30,822	0/0:20,0:20:28.80:0,29,1222	1/1:12,1:13:21:240,21,0	1/1:26,0:26:72.19:853,72,0	1/1:20,0:20:56.87:601,57,0	1/1:30,0:30:75.22:893,75,0	0/0:38,0:38:99:0,111,3422	0/0:32,0:32:96.32:0,96,2939	0/0:12,0:12:36.08:0,36,1086	1/1:25,0:25:63.19:760,63,0	1/1:20,0:20:51.16:614,51,0	1/1:17,0:17:45.14:542,45,0	0/0:28,0:28:84.25:0,84,2638	1/1:18,1:19:57.04:666,57,0	1/1:23,0:23:47.77:562,48,0	1/1:20,0:20:48.08:558,48,0	1/1:14,0:14:33.10:407,33,0	1/1:9,0:9:26.95:304,27,0	1/1:10,0:10:23.72:251,24,0	1/1:21,0:21:41.96:470,42,0	1/1:14,0:14:29.93:326,30,0	1/1:16,0:16:33.03:367,33,0	1/1:14,0:14:33.06:381,33,0	1/1:20,0:20:52.02:603,52,0	1/1:28,0:28:72.22:867,72,0	1/1:6,1:7:21.07:262,21,0
chr10	30952659	.	TAC	T	1005.80	PASS	AB=1.000;AC=30;AF=0.833;AN=36;BaseQRankSum=2.221;DP=403;FS=0.000;HRun=0;HaplotypeScore=60.9357;InbreedingCoeff=0.2213;MQ=69.60;MQ0=16;MQRankSum=0.213;QD=4.35;ReadPosRankSum=-0.081;VQSLOD=2.0706;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:16.53:0,17,131	./.	./.	./.	1/1:10,1:11:1.68:4,2,0	1/1:16,0:16:17.47:120,17,0	1/1:17,6:21:1.89:30,2,0	./.	0/1:21,0:21:27.61:28,0,194	./.	./.	1/1:11,2:13:14.90:126,15,0	1/1:8,0:7:11.72:83,12,0	1/1:5,0:5:3.01:32,3,0	0/0:14,0:14:2.04:0,2,6	0/1:16,0:15:7.75:81,0,8	1/1:23,2:24:17.77:171,18,0	1/1:14,0:14:7.27:90,7,0	./.	./.	./.	1/1:7,0:6:2.89:19,3,0	1/1:9,2:11:3.01:31,3,0	1/1:29,1:30:10.25:90,10,0	1/1:11,0:10:11.95:107,12,0	1/1:13,0:13:5.41:55,5,0	./.	1/1:6,0:6:0.84:48,1,0
chr10	30952711	.	C	CAGAGAG	3888.44	PASS	AB=0.698;AC=34;AF=0.739;AN=46;BaseQRankSum=1.280;DP=411;FS=0.000;HRun=0;HaplotypeScore=110.7044;InbreedingCoeff=0.5272;MQ=42.08;MQ0=27;MQRankSum=-0.880;QD=13.84;ReadPosRankSum=-1.080;VQSLOD=2.7407;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	1/1:3,0:3:3.48:40,3,0	0/0:4,0:1:3:0,3,26	0/0:3,0:2:3.01:0,3,53	1/1:15,0:14:15.05:334,15,0	1/1:22,0:20:20.16:548,20,0	1/1:25,0:20:2.96:44,3,0	1/1:22,0:22:6.02:111,6,0	0/0:14,9:24:2.60:0,3,61	1/1:11,0:9:27.04:488,27,0	1/1:11,0:9:3.01:47,3,0	1/1:12,3:15:2.18:32,2,0	1/1:14,2:12:8.86:194,9,0	0/1:10,3:13:0:1,0,0	0/0:15,0:18:27.09:0,27,534	1/1:18,2:18:17.23:359,17,0	./.	1/1:19,0:16:33.07:747,33,0	1/1:12,0:12:18.30:280,18,0	./.	0/0:9,0:5:3.24:0,3,10	1/1:11,0:10:3.01:66,3,0	./.	1/1:24,0:23:15.05:429,15,0	0/1:9,6:18:0.01:0,0,0	./.	1/1:11,0:11:13.24:168,13,0	1/1:7,0:6:0.89:2,1,0
chr10	30952854	.	C	CT	1239.01	PASS	AB=0.917;AC=15;AF=0.268;AN=56;BaseQRankSum=10.378;DP=513;FS=2.993;HRun=10;HaplotypeScore=70.8109;InbreedingCoeff=0.5773;MQ=68.24;MQ0=7;MQRankSum=0.923;QD=6.45;ReadPosRankSum=-1.290;VQSLOD=1.5223;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:29,1:31:55.57:0,56,576	0/0:2,0:3:7.24:0,7,52	0/1:25,0:14:30.18:30,0,60	0/1:18,0:13:1.02:1,0,18	0/0:23,0:23:43.93:0,44,351	0/0:14,1:13:35.93:0,36,295	0/0:26,1:27:33.94:0,34,484	0/1:20,1:19:2.96:3,0,184	0/0:18,0:18:35.92:0,36,295	1/1:8,13:20:1.97:361,2,0	1/1:5,16:20:23.63:452,24,0	0/0:14,0:14:20.90:0,21,165	0/0:19,0:17:38.94:0,39,320	0/0:9,0:9:20.97:0,21,172	0/0:11,0:11:21.44:0,21,174	0/0:10,0:10:26.95:0,27,220	0/0:35,0:35:93.33:0,93,762	0/0:28,0:28:39.59:0,40,533	1/1:9,1:17:25.89:151,26,0	0/1:8,1:15:14.72:144,0,15	1/1:4,0:16:20.01:105,20,0	0/0:11,0:11:20.95:0,21,172	0/1:17,1:19:0.04:0,0,196	0/0:20,0:19:50.88:0,51,413	0/0:21,0:22:52.94:0,53,420	0/0:20,0:19:38.91:0,39,318	1/1:3,1:15:28.68:161,29,0	0/0:4,0:5:11.02:0,11,80
chr10	30953096	.	C	CT	4910.95	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=5.255;DP=575;FS=0.000;HRun=1;HaplotypeScore=66.7136;InbreedingCoeff=0.9981;MQ=70.62;MQ0=0;MQRankSum=0.164;QD=37.78;ReadPosRankSum=0.818;VQSLOD=5.2853;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,111,1408	0/0:8,0:8:24.08:0,24,312	0/0:9,0:8:24.08:0,24,303	0/0:29,0:27:69.20:0,69,834	0/0:16,0:16:45.15:0,45,584	0/0:17,0:17:51.14:0,51,633	0/0:29,0:29:87.27:0,87,1115	0/0:31,0:31:84.26:0,84,1068	0/0:15,0:15:42.14:0,42,545	1/1:2,19:21:57.18:832,57,0	1/1:4,13:16:33.07:469,33,0	0/0:17,0:17:51.15:0,51,648	0/0:19,0:19:57.19:0,57,739	0/0:13,0:13:39.13:0,39,504	0/0:20,0:20:54.15:0,54,671	0/0:12,0:12:33.11:0,33,428	0/0:29,0:29:84.26:0,84,1076	0/0:34,0:34:99:0,102,1321	1/1:2,18:20:51.17:758,51,0	1/1:1,9:10:24.04:335,24,0	1/1:0,37:37:99:1529,102,0	0/0:9,0:9:24.08:0,24,311	0/0:16,0:16:42.02:0,42,505	0/0:32,0:32:93.29:0,93,1192	0/0:17,0:17:45.08:0,45,563	0/0:23,0:23:63.18:0,63,790	1/1:0,25:25:66.22:988,66,0	0/0:10,0:10:30.10:0,30,389
chr10	30953566	.	TC	T	5118	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=16.647;DP=616;FS=7.401;HRun=1;HaplotypeScore=81.3421;InbreedingCoeff=0.9881;MQ=85.33;MQ0=0;MQRankSum=-4.546;QD=37.09;ReadPosRankSum=1.502;VQSLOD=5.1221;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,132,2047	0/0:11,0:11:33.11:0,33,527	0/0:26,0:26:75.23:0,75,1120	0/0:14,0:14:39.13:0,39,615	0/0:23,0:23:69.21:0,69,1055	0/0:21,0:21:63.20:0,63,981	0/0:21,0:21:63.20:0,63,983	0/0:29,0:29:84.28:0,84,1322	0/0:26,0:26:78.25:0,78,1223	1/1:1,21:22:60.15:801,60,0	1/1:0,17:17:48.16:671,48,0	0/0:23,0:23:69.24:0,69,1102	0/0:19,0:19:57.18:0,57,887	0/0:18,0:18:54.18:0,54,857	0/0:21,0:21:60.20:0,60,954	0/0:20,0:20:60.20:0,60,956	0/0:35,0:35:99:0,105,1671	0/0:12,0:12:36.12:0,36,575	1/1:0,11:11:33.07:422,33,0	1/1:0,21:21:54.18:755,54,0	1/1:0,36:36:99:1381,99,0	0/0:16,0:16:48.15:0,48,741	0/0:12,0:12:36.12:0,36,575	0/0:23,0:23:69.22:0,69,1075	0/0:34,0:34:99:0,99,1536	0/0:27,0:27:81.27:0,81,1272	1/1:0,31:31:78.26:1089,78,0	0/0:3,0:3:9.03:0,9,144
chr10	30953696	.	T	TA	9897.06	PASS	AB=1.000;AC=37;AF=0.661;AN=56;BaseQRankSum=-14.260;DP=574;FS=8.492;HRun=9;HaplotypeScore=56.3776;InbreedingCoeff=0.9385;MQ=77.20;MQ0=0;MQRankSum=0.238;QD=26.11;ReadPosRankSum=3.224;VQSLOD=5.3016;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,34:37:99:1095,99,0	1/1:1,7:8:18.05:199,18,0	0/0:20,0:15:12.35:0,12,93	0/1:20,0:14:0.11:0,0,62	1/1:2,24:26:72.19:796,72,0	1/1:1,15:16:45.12:498,45,0	1/1:2,16:18:16.06:405,16,0	1/1:6,21:27:60.15:654,60,0	0/0:19,0:18:50.96:0,51,439	0/0:27,0:27:68.46:0,68,594	0/0:22,0:22:53.92:0,54,453	1/1:1,18:19:51.14:564,51,0	1/1:2,21:23:60.16:661,60,0	1/1:3,17:20:48.13:531,48,0	0/0:18,0:18:53.96:0,54,461	1/1:3,12:15:7.04:306,7,0	1/1:3,25:28:51.65:743,52,0	1/1:0,19:19:51.14:564,51,0	0/0:21,0:21:50.93:0,51,430	0/0:27,0:27:65.97:0,66,570	0/0:12,0:12:32.99:0,33,286	1/1:1,12:13:27.07:292,27,0	1/1:0,20:20:48.02:530,48,0	1/1:1,17:18:51.14:564,51,0	1/1:1,23:24:63.17:697,63,0	1/1:0,18:18:54.15:597,54,0	0/0:28,0:26:67.95:0,68,563	1/1:2,8:10:18.05:199,18,0
chr10	30954428	.	G	GAGAA	276.89	PASS	AB=1.000;AC=8;AF=0.154;AN=52;BaseQRankSum=-0.930;DP=504;FS=0.000;HRun=0;HaplotypeScore=135.2428;InbreedingCoeff=0.3487;MQ=66.50;MQ0=2;MQRankSum=1.500;QD=2.18;ReadPosRankSum=2.461;VQSLOD=1.7233;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:17:5.96:0,6,47	0/0:10,0:10:21.04:0,21,279	./.	./.	0/0:9,0:14:8.90:0,9,65	0/0:17,0:17:30.02:0,30,370	0/0:10,0:10:3:0,3,25	0/0:27,0:26:0:0,0,0	1/1:8,14:22:2.88:70,3,0	0/0:28,0:28:23.85:0,24,185	0/0:18,0:18:11.84:0,12,90	0/0:20,0:20:36.10:0,36,501	0/0:14,0:14:23.96:0,24,268	0/0:14,0:14:26.95:0,27,316	0/0:23,0:23:48.07:0,48,563	0/0:15,0:15:36.01:0,36,323	0/0:24,0:24:29.99:0,30,266	0/0:23,0:23:35.96:0,36,315	0/1:16,0:16:2.71:62,0,3	0/1:29,0:29:50.62:56,0,51	1/1:5,0:5:7.66:70,8,0	0/0:5,0:5:6.01:0,6,73	0/0:11,0:11:20.98:0,21,251	0/1:25,0:25:14.89:15,0,383	0/0:23,0:23:23.87:0,24,208	0/0:18,0:22:26.46:0,26,243	0/1:30,0:30:7.03:132,0,7	0/0:11,0:11:27.04:0,27,257
chr10	30954467	.	AAAGAAAGAAAGGAAGG	A	2831.65	PASS	AB=1.000;AC=14;AF=0.250;AN=56;BaseQRankSum=1.432;DP=529;FS=2.090;HRun=0;HaplotypeScore=264.7290;InbreedingCoeff=0.0642;MQ=56.46;MQ0=7;MQRankSum=3.096;QD=10.81;ReadPosRankSum=-6.502;VQSLOD=0.9520;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:20,0:19:48.20:48,0,474	0/0:9,0:9:24.08:0,24,1583	0/0:4,0:3:8.77:0,9,116	0/0:11,0:5:11.60:0,12,165	0/0:15,0:15:11.38:0,11,541	0/0:13,0:13:30.28:0,30,1709	0/1:11,0:11:42.72:43,0,382	0/1:24,0:18:19.71:20,0,561	0/0:23,0:23:27.09:0,27,808	1/1:3,30:33:83.54:1608,84,0	1/1:15,0:15:18.75:357,19,0	0/0:23,0:23:56.32:0,56,3077	0/0:16,0:16:45.15:0,45,2208	0/0:20,0:20:60.19:0,60,2605	0/0:24,0:24:66.23:0,66,3625	0/0:18,0:18:24.09:0,24,1512	0/1:26,0:26:99:115,0,1633	0/1:26,0:26:0.72:1,0,1733	0/1:16,0:14:99:275,0,479	0/1:27,0:26:99:179,0,1183	0/1:8,0:8:7.12:7,0,450	0/0:12,0:12:32.12:0,32,1115	0/0:16,0:16:48.16:0,48,2118	0/0:28,0:28:76.83:0,77,2848	0/0:22,0:22:27.43:0,27,1684	0/1:26,0:26:70.43:70,0,2292	0/1:30,0:30:99:270,0,1478	0/0:13,0:13:39.13:0,39,1138
chr10	30954470	.	GAAA	G	1609.10	PASS	AB=0.817;AC=9;AF=0.161;AN=56;BaseQRankSum=7.460;DP=539;FS=9.549;HRun=3;HaplotypeScore=137.2700;InbreedingCoeff=-0.2029;MQ=55.17;MQ0=9;MQRankSum=-1.070;QD=8.75;ReadPosRankSum=3.483;VQSLOD=-0.3202;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:19:5.60:0,6,235	0/0:10,0:10:26.46:0,26,441	0/0:6,0:3:6.02:0,6,78	0/1:10,0:5:33.25:33,0,102	0/0:13,0:15:11.79:0,12,99	0/0:14,0:14:37.67:0,38,529	0/1:10,1:11:36.34:36,0,48	0/0:26,0:19:21.37:0,21,262	0/0:23,0:23:27.09:0,27,390	0/1:30,0:30:99:110,0,399	0/0:15,0:15:10.87:0,11,188	0/0:22,0:22:58.16:0,58,911	0/0:17,0:17:46.43:0,46,591	0/0:21,0:21:60.10:0,60,715	0/0:24,0:24:66.22:0,66,1392	0/1:10,8:18:20.38:287,0,20	0/1:18,7:25:82.33:223,0,82	0/1:16,9:25:98.82:282,0,99	0/0:18,0:15:41.04:0,41,436	0/0:25,0:24:52.90:0,53,694	0/0:9,0:9:23.76:0,24,281	0/0:13,0:13:36.24:0,36,306	0/0:16,0:16:45.29:0,45,536	0/0:29,0:29:83.31:0,83,920	0/1:16,6:22:90.65:168,0,91	0/1:19,8:27:57.01:340,0,57	0/0:32,0:32:93.41:0,93,1135	0/1:7,7:14:23.03:270,0,23
chr10	30954471	.	AAAGAAAGGAAGG	A	2875.90	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=1.006;DP=542;FS=0.878;HRun=0;HaplotypeScore=225.6652;InbreedingCoeff=0.0234;MQ=55.39;MQ0=9;MQRankSum=3.522;QD=13.01;ReadPosRankSum=-6.820;VQSLOD=0.6021;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:18:3.61:0,4,402	0/0:10,0:10:27.09:0,27,1205	0/0:6,0:3:8.77:0,9,116	0/0:13,0:6:17.54:0,18,230	0/0:15,0:15:6.01:0,6,435	0/1:15,0:15:15.44:15,0,1226	0/0:10,0:10:1.06:0,1,304	0/0:27,0:20:42.12:0,42,706	0/0:23,0:23:27.07:0,27,652	1/1:30,0:30:77.87:1192,78,0	1/1:0,15:15:38.96:693,39,0	0/0:22,0:22:17.25:0,17,2182	0/0:17,0:17:26.18:0,26,1571	0/0:21,0:21:60.19:0,60,1876	0/0:24,0:24:66.20:0,66,2697	0/0:18,0:18:2.15:0,2,1085	0/1:25,0:25:11.69:12,0,1271	0/0:25,0:25:25.22:0,25,1382	0/1:19,0:16:99:322,0,176	0/1:26,0:25:99:259,0,512	0/1:10,0:10:99:126,0,191	0/1:13,0:13:14.69:15,0,920	0/1:16,0:16:1.77:2,0,1500	0/0:30,0:30:0.29:0,0,2019	0/1:22,0:22:6.65:7,0,1294	0/0:27,0:27:5.42:0,5,1805	0/1:30,0:30:99:386,0,512	0/0:14,0:14:42.14:0,42,945
chr10	30954475	.	AAAGGAAGG	A	3071.86	PASS	AB=1.000;AC=14;AF=0.250;AN=56;BaseQRankSum=6.951;DP=545;FS=1.477;HRun=0;HaplotypeScore=187.0235;InbreedingCoeff=0.7397;MQ=55.68;MQ0=8;MQRankSum=2.025;QD=18.51;ReadPosRankSum=-1.279;VQSLOD=2.8490;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:18,0:17:5.62:6,0,367	0/0:10,0:10:27.09:0,27,962	0/0:7,0:4:11.78:0,12,183	0/0:14,0:7:20.55:0,21,293	0/1:17,0:17:6.54:7,0,398	0/0:16,0:16:33.11:0,33,1056	0/0:10,0:10:21.07:0,21,301	0/0:24,0:18:45.15:0,45,762	0/0:21,0:21:24.08:0,24,524	1/1:30,0:30:57.09:932,57,0	1/1:15,0:15:36.01:502,36,0	0/0:21,0:21:54.18:0,54,1801	0/0:18,0:18:48.16:0,48,1315	0/0:21,0:21:60.20:0,60,1527	0/0:26,0:26:63.20:0,63,1821	0/0:18,0:18:45.15:0,45,775	0/0:24,0:24:57.11:0,57,933	0/0:25,0:25:63.21:0,63,1079	1/1:20,0:17:35.34:444,35,0	1/1:13,11:23:1.53:368,2,0	1/1:13,0:13:0.54:336,1,0	0/0:15,0:15:39.13:0,39,909	0/0:16,0:16:42.14:0,42,1261	0/0:28,0:28:66.22:0,66,1719	0/0:23,0:23:60.20:0,60,1166	0/0:28,0:28:75.26:0,75,1438	1/1:29,0:29:36.16:651,36,0	0/0:14,0:14:42.14:0,42,704
chr10	30954477	.	AG	A	211.69	PASS	AB=0.863;AC=4;AF=0.071;AN=56;BaseQRankSum=8.589;DP=553;FS=3.946;HRun=2;HaplotypeScore=125.6177;InbreedingCoeff=-0.0903;MQ=55.67;MQ0=8;MQRankSum=-1.055;QD=2.52;ReadPosRankSum=1.493;VQSLOD=-0.0509;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:17:19.23:0,19,445	0/0:10,0:10:27.08:0,27,354	0/0:9,0:6:14.90:0,15,172	0/0:16,0:8:18.94:0,19,231	0/0:18,0:18:36.16:0,36,428	0/0:17,0:17:47.98:0,48,538	0/0:9,0:9:4.41:0,4,180	0/0:28,0:22:60.08:0,60,747	0/0:22,0:22:27.06:0,27,358	0/0:30,0:30:5.80:0,6,105	0/0:15,0:15:9.28:0,9,109	0/0:21,0:21:54.17:0,54,733	0/0:18,0:18:48.62:0,49,632	0/0:22,0:22:63.20:0,63,841	0/0:25,0:25:69.23:0,69,1020	0/0:20,0:20:53.01:0,53,447	0/0:24,0:24:51.55:0,52,497	0/0:23,0:23:60.94:0,61,529	0/1:18,2:17:46.62:94,0,47	0/1:14,9:22:41.69:42,0,178	0/1:13,0:13:51.43:51,0,71	0/0:15,0:15:45.03:0,45,546	0/0:16,0:16:48.15:0,48,636	0/0:26,0:26:75.21:0,75,981	0/0:23,0:23:65.01:0,65,683	0/0:30,0:30:73.62:0,74,718	0/1:22,6:28:58.07:134,0,58	0/0:14,0:14:32.68:0,33,256
chr10	30954480	.	AAGG	A	1047.60	PASS	AB=0.863;AC=8;AF=0.143;AN=56;BaseQRankSum=9.791;DP=556;FS=2.310;HRun=0;HaplotypeScore=142.0962;InbreedingCoeff=0.4977;MQ=56.70;MQ0=8;MQRankSum=0.436;QD=8.00;ReadPosRankSum=0.968;VQSLOD=3.0034;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:14:36.98:0,37,617	0/0:10,0:10:27.09:0,27,596	0/0:10,0:7:18.06:0,18,331	0/0:16,0:8:21.07:0,21,387	0/0:18,0:18:39.10:0,39,725	0/0:15,0:15:42.14:0,42,875	0/0:10,0:10:23.57:0,24,392	0/0:31,0:25:72.14:0,72,1287	0/0:19,0:19:27.09:0,27,570	1/1:30,0:30:45.54:261,46,0	1/1:15,0:15:7.69:81,8,0	0/0:19,0:19:54.18:0,54,1196	0/0:18,0:18:51.14:0,51,1024	0/0:23,0:23:69.24:0,69,1450	0/0:27,0:27:72.24:0,72,1431	0/0:20,0:20:56.25:0,56,728	0/0:22,0:22:61.47:0,61,813	0/0:23,0:23:62.11:0,62,836	0/1:20,2:19:6.92:219,0,7	0/1:14,9:22:73.43:151,0,73	0/1:14,0:14:46.85:141,0,47	0/0:15,0:15:45.14:0,45,925	0/0:16,0:16:48.12:0,48,988	0/0:29,0:29:84.28:0,84,1682	0/0:25,0:25:74.35:0,74,1117	0/0:30,0:30:80.74:0,81,1237	0/1:21,6:27:1.72:338,0,2	0/0:14,0:14:41.40:0,41,464
chr10	30954678	.	AGG	A	17668.34	PASS	AB=0.516;AC=35;AF=0.625;AN=56;BaseQRankSum=19.757;DP=655;FS=2.914;HRun=2;HaplotypeScore=141.7142;InbreedingCoeff=0.9239;MQ=75.41;MQ0=0;MQRankSum=-4.003;QD=44.39;ReadPosRankSum=2.305;VQSLOD=4.9840;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,40:40:99:1762,108,0	1/1:0,13:13:36.12:573,36,0	0/0:15,0:15:45.15:0,45,914	0/0:27,0:27:69.18:0,69,1340	1/1:0,15:15:45.12:706,45,0	1/1:0,15:15:45.15:733,45,0	1/1:0,30:30:90.31:1467,90,0	1/1:0,24:24:66.19:1026,66,0	0/0:29,0:29:87.30:0,87,1768	0/0:29,0:29:84.29:0,84,1707	0/0:21,0:21:57.15:0,57,1105	1/1:0,23:23:60.20:978,60,0	1/1:0,16:16:39.13:636,39,0	1/1:0,15:15:39.13:636,39,0	0/0:24,0:24:72.22:0,72,1375	1/1:0,22:22:66.23:1077,66,0	1/1:0,16:16:42.14:685,42,0	1/1:0,15:15:45.15:734,45,0	0/0:25,0:25:72.25:0,72,1453	0/0:25,0:25:75.24:0,75,1479	0/0:30,0:30:90.30:0,90,1782	1/1:0,27:27:75.13:1136,75,0	1/1:0,19:19:54.18:880,54,0	1/1:0,34:34:84.25:1357,84,0	1/1:0,24:24:69.24:1125,69,0	0/1:2,30:32:28.75:1275,0,29	0/0:32,0:32:96.26:0,96,1836	1/1:0,18:18:54.18:881,54,0
chr10	30955224	.	G	GCAAGTA	2746.80	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=-2.092;DP=641;FS=1.478;HRun=0;HaplotypeScore=140.1738;InbreedingCoeff=0.7809;MQ=90.64;MQ0=0;MQRankSum=-7.647;QD=44.30;ReadPosRankSum=-2.041;VQSLOD=3.1899;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:78.25:0,78,1694	0/0:9,0:9:27.09:0,27,617	0/0:27,0:27:72.22:0,72,1481	0/0:27,0:28:60.15:0,60,1273	0/0:26,0:26:69.22:0,69,1492	0/0:27,0:27:75.22:0,75,1665	0/0:29,0:29:81.23:0,81,1666	0/0:26,0:26:69.23:0,69,1498	0/0:32,0:32:75.26:0,75,1712	1/1:11,9:20:54.10:1720,54,0	1/1:4,9:13:36.09:1135,36,0	0/0:10,0:10:27.09:0,27,604	0/0:16,0:16:48.15:0,48,1052	0/0:27,0:27:72.20:0,72,1595	0/0:19,0:19:54.19:0,54,1203	0/0:21,0:21:54.12:0,54,1138	0/0:26,0:26:69.24:0,69,1576	0/0:10,0:10:30.10:0,30,681	0/0:20,0:20:48.14:0,48,956	0/0:23,0:23:66.21:0,66,1463	0/0:34,0:34:96.29:0,96,2020	0/0:28,0:28:78.27:0,78,1777	0/0:22,0:22:66.22:0,66,1377	0/0:34,0:34:81.26:0,81,1806	0/0:15,0:15:42.14:0,42,959	0/1:29,0:29:20.88:21,0,1495	0/0:27,0:27:69.22:0,69,1529	0/0:13,0:13:39.09:0,39,800
chr10	30955354	.	TACACACACACACACAC	T	17574.63	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=8.905;DP=525;FS=7.624;HRun=0;HaplotypeScore=197.6775;InbreedingCoeff=0.9012;MQ=55.54;MQ0=20;MQRankSum=-9.225;QD=56.51;ReadPosRankSum=4.274;VQSLOD=3.4774;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:13,20:33:33.11:1468,33,0	1/1:1,4:5:9.03:400,9,0	0/0:38,0:4:2.97:0,3,20	0/0:34,0:8:3.95:0,4,232	1/1:5,14:19:29.97:512,30,0	1/1:8,12:20:24.08:1068,24,0	1/1:8,17:26:33.11:1423,33,0	1/1:9,5:14:12.22:215,12,0	0/0:22,0:24:57.17:0,57,3624	0/0:12,0:17:38.16:0,38,2055	0/0:8,0:8:9.03:0,9,608	1/1:4,13:17:19.31:804,19,0	1/1:2,8:9:18.06:800,18,0	1/1:3,18:22:42.14:1790,42,0	0/0:19,0:20:51.18:0,51,3580	1/1:4,14:18:22.87:1455,23,0	1/1:8,17:25:30.10:1335,30,0	1/1:7,8:15:12.04:534,12,0	0/0:14,0:18:36.12:0,36,2125	0/0:5,0:13:9.71:0,10,698	0/0:26,0:26:24.80:0,25,1748	1/1:5,13:17:30.06:1132,30,0	1/1:3,13:16:23.96:1000,24,0	1/1:5,9:14:8.99:287,9,0	1/1:1,12:14:27.09:1179,27,0	1/1:5,13:18:33.11:1372,33,0	0/0:5,0:13:15.99:0,16,733	1/1:0,7:7:18.06:801,18,0
chr10	30956085	.	TC	T	5666.27	PASS	AB=0.967;AC=47;AF=0.839;AN=56;BaseQRankSum=5.502;DP=475;FS=9.613;HRun=11;HaplotypeScore=81.4041;InbreedingCoeff=0.5997;MQ=71.51;MQ0=1;MQRankSum=0.841;QD=13.06;ReadPosRankSum=2.774;VQSLOD=4.2590;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:11,21:32:41.89:339,42,0	1/1:2,13:15:32.86:258,33,0	0/1:22,0:17:19.47:23,0,19	0/1:14,0:14:29.38:29,0,47	1/1:3,8:11:17.92:142,18,0	1/1:5,17:22:53.93:442,54,0	1/1:3,16:19:32.96:271,33,0	1/1:16,7:24:22.77:172,23,0	0/0:15,0:15:32.91:0,33,303	0/0:13,0:12:18.01:0,18,180	0/0:13,0:13:20:0,20,202	1/1:1,12:16:33.04:234,33,0	1/1:2,10:12:23.92:191,24,0	1/1:1,11:12:26.91:214,27,0	0/1:16,2:18:4.20:4,0,356	1/1:5,15:20:38.94:320,39,0	1/1:2,19:21:39.38:316,39,0	1/1:3,17:20:38.95:320,39,0	1/1:5,12:18:17.52:261,18,0	1/1:1,9:11:20:153,20,0	1/1:5,21:26:46.78:363,47,0	1/1:0,12:14:24.98:177,25,0	1/1:2,6:8:17.93:141,18,0	1/1:5,29:34:71.89:590,72,0	1/1:3,6:10:20:151,20,0	1/1:4,13:17:3.95:235,4,0	1/1:1,13:14:29.96:246,30,0	1/1:0,3:3:8.99:74,9,0
chr10	30956322	.	A	AG	321.25	PASS	AB=0.854;AC=26;AF=0.591;AN=44;BaseQRankSum=1.914;DP=94;FS=9.755;HRun=2;HaplotypeScore=74.4701;InbreedingCoeff=0.1785;MQ=28.99;MQ0=1;MQRankSum=-2.135;QD=4.79;ReadPosRankSum=1.068;VQSLOD=-0.1756;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	0/1:4,1:5:0.03:0,0,0	1/1:4,1:3:2.84:14,3,0	1/1:1,0:1:2.96:19,3,0	1/1:3,0:2:2.99:35,3,0	1/1:3,0:3:8.75:71,9,0	0/1:8,0:7:17.81:18,0,40	0/0:8,0:7:4.25:0,4,29	1/1:1,1:2:2.95:32,3,0	0/0:3,0:3:0:0,0,0	0/1:0,2:2:0:0,0,0	0/0:5,0:5:4.37:0,4,38	0/1:0,1:1:0:0,0,0	./.	0/1:1,0:1:0:0,0,0	1/1:6,0:6:11.90:124,12,0	0/1:5,0:5:0.11:0,0,0	0/1:11,0:10:14:14,0,83	1/1:2,3:4:6.14:36,6,0	1/1:3,0:3:0.55:16,1,0	0/0:1,0:1:0:0,0,0	0/1:4,0:4:13.71:27,0,14	1/1:1,1:2:4.66:20,5,0	0/0:2,0:2:0.47:0,0,1	./.
chr10	30956323	.	G	GA	183.24	PASS	AB=0.967;AC=20;AF=0.417;AN=48;BaseQRankSum=1.082;DP=103;FS=3.581;HRun=1;HaplotypeScore=74.7334;InbreedingCoeff=0.2335;MQ=37.92;MQ0=1;MQRankSum=-1.756;QD=3.16;ReadPosRankSum=0.211;VQSLOD=-0.0205;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:6,0:1:0:0,0,0	./.	0/1:5,0:5:0.03:0,0,0	0/0:5,0:3:0.88:0,1,2	1/1:1,0:1:1.55:4,2,0	0/1:4,0:3:8.37:8,0,14	1/1:3,0:3:8.57:45,9,0	0/0:9,0:8:10.84:0,11,101	0/0:7,1:7:6.01:0,6,65	0/1:2,0:2:9.35:9,0,14	0/0:3,0:3:5:0,5,26	0/1:2,0:2:0:0,0,0	0/0:5,0:5:4.37:0,4,41	0/1:1,0:1:0:0,0,0	./.	0/1:1,0:1:0:0,0,0	1/1:4,2:6:12.03:157,12,0	0/1:4,2:6:0.11:0,0,0	0/1:10,1:10:9.44:9,0,101	1/1:6,0:5:2.69:9,3,0	0/0:3,0:3:0.52:0,1,2	0/0:1,0:1:0:0,0,0	0/1:4,0:4:7.05:7,0,25	0/1:2,0:2:0.10:2,0,0	1/1:4,0:4:2.94:40,3,0	0/0:1,0:1:0:0,0,0
chr10	30956354	.	AGCT	A	3828.41	PASS	AB=0.811;AC=42;AF=0.808;AN=52;BaseQRankSum=-0.453;DP=272;FS=8.356;HRun=0;HaplotypeScore=87.5230;InbreedingCoeff=0.1026;MQ=51.65;MQ0=8;MQRankSum=-4.952;QD=17.97;ReadPosRankSum=-2.180;VQSLOD=2.4078;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,1:5:9.43:91,9,0	1/1:3,2:5:12:126,12,0	0/0:30,0:5:9.87:0,10,82	0/0:27,0:9:1.40:0,1,172	1/1:11,5:15:16.86:149,17,0	1/1:6,1:5:14.98:176,15,0	1/1:2,1:3:5.99:60,6,0	1/1:14,1:15:35.35:377,35,0	1/1:3,3:4:10.84:111,11,0	1/1:10,7:15:3.10:421,3,0	0/1:14,4:18:55.51:289,0,56	1/1:5,2:7:14.99:176,15,0	1/1:3,1:4:8.98:80,9,0	1/1:1,3:4:8.94:106,9,0	0/1:3,1:3:41.73:42,0,51	1/1:2,1:3:9:110,9,0	./.	./.	0/1:11,2:12:1.50:227,0,1	0/1:4,4:8:23.04:62,0,23	0/1:13,2:14:11.06:109,0,11	1/1:12,6:20:33.07:391,33,0	1/1:5,6:11:24.72:226,25,0	1/1:2,0:2:5.99:57,6,0	1/1:12,3:15:31.90:266,32,0	1/1:1,1:2:3.01:39,3,0	0/1:5,1:6:0.49:102,0,0	1/1:1,1:4:5.04:38,5,0
chr10	30956355	.	GCTA	G	2712.94	PASS	AB=0.915;AC=42;AF=0.808;AN=52;BaseQRankSum=-0.760;DP=257;FS=12.346;HRun=0;HaplotypeScore=91.9453;InbreedingCoeff=0.0758;MQ=52.72;MQ0=9;MQRankSum=-4.547;QD=13.56;ReadPosRankSum=-2.384;VQSLOD=1.8134;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,2:5:6.96:69,7,0	1/1:3,2:5:8.95:93,9,0	0/0:28,0:5:8.21:0,8,71	0/0:29,0:9:20.57:0,21,176	1/1:11,4:14:2.03:125,2,0	1/1:3,4:5:11.99:136,12,0	1/1:2,1:3:5.92:38,6,0	1/1:6,8:15:27.79:277,28,0	1/1:6,0:4:2.80:42,3,0	1/1:14,1:14:1.84:282,2,0	0/1:15,2:17:99:202,0,114	1/1:5,2:7:14.72:127,15,0	1/1:2,2:4:6.91:91,7,0	1/1:4,0:4:5.95:53,6,0	0/1:3,1:3:27.08:27,0,29	1/1:2,1:3:9.01:94,9,0	./.	./.	0/1:10,0:9:4.66:158,0,5	0/1:7,0:7:18.60:35,0,19	0/1:13,0:11:40.38:40,0,55	1/1:18,1:19:36.77:329,37,0	1/1:8,3:11:26.47:231,26,0	1/1:0,2:2:5.99:54,6,0	1/1:9,4:14:25.44:211,25,0	1/1:2,0:2:2.98:21,3,0	0/1:4,0:5:7.88:72,0,8	1/1:3,0:3:3.01:51,3,0
chr10	30956358	.	AGGG	A	243.12	PASS	AB=0.970;AC=19;AF=0.352;AN=54;BaseQRankSum=2.453;DP=282;FS=16.768;HRun=4;HaplotypeScore=108.6648;InbreedingCoeff=-0.2802;MQ=48.90;MQ0=9;MQRankSum=-1.952;QD=1.55;ReadPosRankSum=1.665;VQSLOD=-0.6563;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:5:7.09:0,7,49	0/1:6,0:6:16.39:16,0,22	0/0:28,0:5:3.67:0,4,71	0/0:32,0:9:15.23:0,15,154	0/1:14,2:15:1.35:1,0,73	0/1:10,0:8:18.99:19,0,80	0/0:3,0:3:5.97:0,6,55	0/1:15,0:15:12.31:12,0,127	0/1:7,0:5:6.42:6,0,128	0/1:16,1:14:45.16:45,0,301	0/1:19,0:18:2.77:3,0,554	0/0:7,0:7:11.93:0,12,71	0/1:5,0:5:3.68:4,0,44	0/1:4,0:4:8.98:9,0,39	0/1:5,0:4:1.56:2,0,86	0/1:3,0:3:10.40:10,0,19	0/0:1,0:1:3.01:0,3,38	./.	0/1:10,1:10:66.55:67,0,151	0/1:7,1:8:4.26:4,0,126	0/0:17,0:15:5.78:0,6,370	0/1:18,2:21:57.03:138,0,57	0/0:12,0:12:1.91:0,2,118	0/0:2,0:2:5.03:0,5,29	0/0:15,1:16:9.41:0,9,94	1/1:2,0:2:2.92:17,3,0	0/1:5,0:5:10.03:10,0,102	1/1:3,0:3:2.90:16,3,0
chr10	30956360	.	G	GA	470.32	PASS	AB=0.982;AC=26;AF=0.464;AN=56;BaseQRankSum=4.459;DP=326;FS=4.914;HRun=0;HaplotypeScore=150.5652;InbreedingCoeff=-0.2822;MQ=48.80;MQ0=9;MQRankSum=-2.287;QD=2.26;ReadPosRankSum=-0.384;VQSLOD=2.5396;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:6,0:5:11.86:30,0,12	0/1:8,0:7:11.70:12,0,23	0/0:29,2:5:9.08:0,9,80	0/0:34,0:10:14.89:0,15,198	0/1:20,0:19:39.64:54,0,40	0/1:11,0:9:9.62:10,0,91	0/1:4,0:4:16.03:16,0,35	0/1:16,0:16:65.52:66,0,92	0/1:8,0:6:14.90:15,0,70	0/1:19,1:17:4.43:4,0,207	0/0:18,1:18:9.07:0,9,366	0/1:8,0:8:17.77:18,0,45	1/1:7,0:7:3.61:10,4,0	0/0:7,0:7:1.31:0,1,71	0/0:5,0:4:8.59:0,9,84	1/1:5,0:5:6.77:41,7,0	0/0:3,0:3:2.96:0,3,19	1/1:1,0:1:2.98:22,3,0	0/1:12,0:11:14.54:15,0,117	0/1:8,0:8:21.23:21,0,79	0/0:18,0:16:21.17:0,21,266	0/1:23,1:24:42.46:63,0,42	0/1:14,0:14:41.69:42,0,53	1/1:4,0:4:5.87:36,6,0	0/1:15,1:17:22.88:67,0,23	0/1:6,0:6:13.38:57,0,13	0/1:5,1:6:13.48:13,0,74	1/1:3,0:3:2.94:18,3,0
chr10	30956361	.	GGA	G	475.37	PASS	AB=0.908;AC=15;AF=0.268;AN=56;BaseQRankSum=2.798;DP=338;FS=37.223;HRun=0;HaplotypeScore=119.1707;InbreedingCoeff=-0.1913;MQ=48.25;MQ0=10;MQRankSum=-3.988;QD=3.01;ReadPosRankSum=0.373;VQSLOD=1.0692;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:5,1:5:7.86:25,0,8	0/0:8,0:7:7.35:0,7,34	0/0:34,0:6:11.76:0,12,77	0/0:35,0:10:22.89:0,23,201	0/1:21,1:21:44.52:69,0,45	0/1:11,0:9:2.39:2,0,101	0/1:5,1:6:23.03:26,0,23	0/1:14,2:16:95.40:145,0,95	0/0:8,0:6:11.96:0,12,157	0/0:20,0:17:34.07:0,34,470	0/0:19,0:18:18.10:0,18,572	0/1:7,1:8:6.80:7,0,43	0/1:6,1:7:7.34:7,0,37	0/0:6,1:7:12.02:0,12,89	0/0:5,0:4:6.01:0,6,81	0/1:5,0:5:18.62:19,0,34	0/0:3,0:3:3.45:0,3,23	0/0:2,0:2:5.91:0,6,38	0/0:12,0:11:21.09:0,21,244	0/1:8,2:10:24.79:25,0,193	0/0:18,0:16:26.93:0,27,415	0/1:24,1:25:59.94:60,0,157	0/1:12,2:14:68.30:68,0,69	1/1:4,0:4:5.93:47,6,0	0/1:17,1:18:46.51:119,0,47	0/1:5,1:6:4.12:4,0,63	0/0:6,0:6:14.84:0,15,171	0/0:2,1:3:1.55:0,2,4
chr10	30956377	.	GA	G	1794.80	PASS	AB=0.804;AC=29;AF=0.518;AN=56;BaseQRankSum=5.592;DP=347;FS=21.562;HRun=2;HaplotypeScore=116.6787;InbreedingCoeff=0.0511;MQ=58.15;MQ0=11;MQRankSum=-4.008;QD=9.50;ReadPosRankSum=1.343;VQSLOD=0.2386;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,2:5:11.38:99,11,0	0/1:4,3:6:6.92:72,0,7	0/0:46,2:11:14.78:0,15,192	0/0:41,1:17:4.21:0,4,184	1/1:12,7:18:8.75:129,9,0	0/1:4,3:6:15.63:104,0,16	0/1:2,4:6:10.61:90,0,11	1/1:6,7:13:26.16:267,26,0	0/1:12,0:10:22.77:23,0,70	0/1:19,0:18:10.03:10,0,415	0/0:19,0:18:1.75:0,2,315	0/1:5,2:7:7.67:81,0,8	1/1:4,3:7:13.56:136,14,0	0/1:9,0:9:5.66:6,0,45	0/0:3,0:2:6.02:0,6,89	0/1:3,1:4:9.62:37,0,10	0/1:2,1:3:12.93:32,0,13	0/1:1,3:4:14.56:85,0,15	0/0:11,0:11:17.48:0,17,273	0/0:15,0:15:34.16:0,34,366	0/0:19,0:17:41.50:0,41,470	0/1:12,4:16:4.21:131,0,4	1/1:4,6:10:20.45:218,20,0	1/1:2,4:6:12.03:140,12,0	1/1:11,6:17:10.70:236,11,0	0/1:3,1:4:19.16:64,0,19	0/1:8,0:7:6.71:7,0,157	1/1:3,0:3:0.47:1,0,0
chr10	30956378	.	AAG	A	537.45	PASS	AB=0.960;AC=22;AF=0.393;AN=56;BaseQRankSum=5.990;DP=331;FS=0.000;HRun=0;HaplotypeScore=119.4387;InbreedingCoeff=-0.2111;MQ=59.35;MQ0=12;MQRankSum=-4.400;QD=3.00;ReadPosRankSum=1.265;VQSLOD=2.2111;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:6,0:4:7.03:34,0,7	0/1:5,1:5:8.25:31,0,8	0/0:47,0:12:12.91:0,13,323	0/0:41,0:17:6.68:0,7,233	0/1:15,1:15:6.15:29,0,6	0/1:6,0:5:0.69:9,0,1	0/1:7,0:7:14.99:29,0,15	0/1:12,0:12:15.47:34,0,15	0/1:7,0:10:99:128,0,143	0/1:19,1:18:52.62:53,0,549	0/1:15,1:16:48.43:48,0,450	0/0:5,0:6:3.91:0,4,22	1/1:6,1:7:6.82:61,7,0	0/1:7,0:7:20.43:32,0,20	0/0:4,0:3:9.03:0,9,159	1/1:3,1:4:5.70:52,6,0	0/0:3,0:3:2.96:0,3,20	0/1:4,0:4:7.66:8,0,8	0/1:10,0:11:16.63:17,0,322	0/0:15,0:15:10.37:0,10,432	0/0:18,0:16:42.32:0,42,774	0/1:13,1:14:25.59:34,0,26	0/0:11,0:10:7.62:0,8,41	0/0:6,0:6:0.17:0,0,0	0/1:15,1:16:18.51:19,0,24	0/1:4,0:5:4.20:4,0,43	0/1:8,0:7:48.19:48,0,221	1/1:3,0:3:2.98:21,3,0
chr10	30956379	.	AG	A	884.80	PASS	AB=0.949;AC=35;AF=0.625;AN=56;BaseQRankSum=6.182;DP=334;FS=26.628;HRun=6;HaplotypeScore=115.6093;InbreedingCoeff=0.5156;MQ=59.17;MQ0=12;MQRankSum=-6.398;QD=5.24;ReadPosRankSum=2.930;VQSLOD=-0.2815;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,0:4:10.51:76,11,0	1/1:6,0:5:5.65:33,6,0	0/0:47,0:12:19.73:0,20,203	0/0:43,1:18:10.05:0,10,144	1/1:14,2:15:10.55:78,11,0	1/1:6,0:5:3.98:67,4,0	1/1:7,0:7:8.82:56,9,0	1/1:11,1:12:17.22:110,17,0	0/1:10,1:10:31.92:32,0,91	0/1:19,1:18:6.44:6,0,324	0/0:15,0:16:14.69:0,15,269	1/1:6,0:6:5.70:44,6,0	1/1:7,0:7:14.37:81,14,0	0/1:6,0:7:1.45:1,0,6	0/0:4,0:3:9.02:0,9,104	1/1:4,0:4:1.55:18,2,0	1/1:3,0:3:2.51:21,3,0	1/1:4,0:4:0.76:32,1,0	0/0:11,0:11:9:0,9,189	0/0:15,0:15:25.97:0,26,300	0/0:18,0:16:41.46:0,41,524	1/1:13,1:14:4.71:63,5,0	1/1:9,1:9:15.96:115,16,0	1/1:6,0:6:11.85:81,12,0	1/1:16,0:16:20.21:124,20,0	0/1:5,0:5:10.58:27,0,11	0/0:7,0:8:11.53:0,12,171	0/1:3,0:3:0:0,0,0
chr10	30956383	.	G	GA	669.34	PASS	AB=0.874;AC=20;AF=0.357;AN=56;BaseQRankSum=4.827;DP=341;FS=32.354;HRun=0;HaplotypeScore=126.4860;InbreedingCoeff=-0.3013;MQ=60.41;MQ0=12;MQRankSum=-4.340;QD=3.25;ReadPosRankSum=1.827;VQSLOD=1.0423;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:5,0:5:35.33:35,0,52	0/1:4,1:4:14.19:14,0,44	0/0:49,0:14:27.40:0,27,347	0/1:42,1:17:1.24:1,0,187	0/0:12,0:12:4.91:0,5,71	0/1:4,1:5:31.13:31,0,71	0/0:6,0:6:7.23:0,7,43	0/0:11,0:12:24.82:0,25,194	0/1:16,1:16:99:152,0,110	0/1:21,2:20:99:123,0,321	0/1:21,0:20:76.49:76,0,267	0/0:4,1:5:5.84:0,6,35	0/1:5,2:7:47.96:59,0,48	1/1:4,1:5:5.55:56,6,0	0/1:7,0:6:7.18:7,0,113	0/1:2,1:3:4.14:59,0,4	0/0:1,0:1:2.90:0,3,16	0/1:3,1:4:33.63:34,0,46	0/1:10,0:10:0.31:0,0,214	0/1:14,5:20:72.82:73,0,257	0/0:21,0:19:41.17:0,41,548	0/1:7,0:10:22.68:23,0,71	0/0:8,1:8:6.18:0,6,135	0/0:5,2:7:9.37:0,9,61	0/0:12,0:13:9.67:0,10,138	0/1:4,1:5:28.74:29,0,88	0/1:11,0:10:43.16:43,0,169	1/1:2,0:3:0.47:1,0,0
chr10	30956400	.	GAAA	G	192.95	PASS	AB=0.926;AC=12;AF=0.214;AN=56;BaseQRankSum=4.496;DP=308;FS=22.041;HRun=4;HaplotypeScore=121.0803;InbreedingCoeff=-0.3130;MQ=54.26;MQ0=15;MQRankSum=-3.490;QD=1.82;ReadPosRankSum=0.615;VQSLOD=-0.5303;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:4:1.91:0,2,154	0/0:1,0:1:3.01:0,3,71	0/0:46,0:14:23.83:0,24,477	0/0:40,0:13:22.62:0,23,379	0/0:6,0:6:15:0,15,252	0/1:4,1:5:23.67:24,0,265	0/0:4,0:4:12.04:0,12,265	0/0:17,0:16:45.15:0,45,1005	0/0:17,0:16:27.44:0,27,528	0/1:23,0:19:13.88:14,0,465	0/1:17,0:15:10.64:11,0,318	0/0:3,1:4:6.02:0,6,137	0/1:5,0:5:34.20:34,0,248	0/1:2,1:3:30.74:31,0,53	0/1:7,0:7:1.80:2,0,314	0/1:1,1:2:29.11:29,0,64	0/0:4,0:4:9.03:0,9,202	0/1:4,0:4:28.19:28,0,197	0/0:12,0:10:20.20:0,20,507	0/1:16,0:16:83.29:83,0,364	0/0:20,0:20:53.56:0,54,1040	0/1:9,0:9:50.73:51,0,176	0/0:7,0:6:18.06:0,18,420	0/0:5,0:5:12.04:0,12,276	0/0:11,0:10:0.43:0,0,446	0/1:5,1:6:18.57:19,0,331	0/1:9,0:8:7.79:8,0,325	0/0:1,0:1:3.01:0,3,69
chr10	30956414	.	GGA	G	1036.25	PASS	AB=0.921;AC=19;AF=0.352;AN=54;BaseQRankSum=3.802;DP=369;FS=68.606;HRun=0;HaplotypeScore=136.3879;InbreedingCoeff=0.0573;MQ=39.99;MQ0=17;MQRankSum=-5.240;QD=7.73;ReadPosRankSum=1.199;VQSLOD=0.3246;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:6,0:6:3.62:24,0,4	./.	0/0:35,0:9:5.38:0,5,166	0/0:33,0:10:2.08:0,2,300	0/1:14,0:14:54.16:54,0,67	0/1:7,0:6:11.50:12,0,115	1/1:5,0:5:8.76:60,9,0	1/1:5,11:15:38.72:534,39,0	0/0:17,0:16:45.13:0,45,652	0/0:23,0:19:25.61:0,26,463	0/0:23,0:21:41.93:0,42,447	1/1:4,1:5:3.45:21,3,0	0/1:8,1:9:34.58:74,0,35	0/1:3,0:3:9.93:10,0,68	0/0:11,0:10:27.05:0,27,449	0/0:4,0:3:1.57:0,2,27	0/1:3,3:6:3.44:152,0,3	0/1:4,0:4:17.40:51,0,17	0/0:15,0:13:33.54:0,34,575	0/0:22,0:21:42.95:0,43,488	0/0:26,0:23:45.62:0,46,812	0/1:20,1:19:27.91:28,0,215	0/0:10,0:10:8.99:0,9,95	1/1:6,0:5:8.80:60,9,0	0/1:17,1:13:31.69:32,0,114	0/1:10,1:8:53.75:55,0,54	0/0:14,0:13:33.10:0,33,498	0/1:2,1:3:36.76:37,0,82
chr10	30956416	.	AGGG	A	957	PASS	AB=0.984;AC=22;AF=0.393;AN=56;BaseQRankSum=7.350;DP=375;FS=10.278;HRun=5;HaplotypeScore=139.6936;InbreedingCoeff=-0.1480;MQ=39.86;MQ0=18;MQRankSum=-5.784;QD=4.49;ReadPosRankSum=-1.703;VQSLOD=-0.5271;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:6,1:6:7.14:34,0,7	0/0:4,0:3:2.80:0,3,13	0/0:30,0:8:2.44:0,2,93	0/0:34,0:10:15.71:0,16,248	0/0:14,0:14:10.81:0,11,50	0/1:7,0:6:26.65:50,0,27	0/1:5,0:5:1.06:36,0,1	0/1:14,0:13:19.68:20,0,87	0/1:17,0:16:28.45:28,0,494	0/1:23,1:20:99:212,0,210	0/1:22,1:21:27.51:227,0,28	1/1:6,0:6:5.85:41,6,0	0/1:9,0:9:21.60:46,0,22	0/1:3,0:3:11.88:12,0,49	0/0:12,0:11:11.09:0,11,519	0/1:4,0:3:2.69:20,0,3	0/1:6,0:6:4.35:4,0,46	1/1:5,0:5:11.95:93,12,0	0/0:15,0:13:28.64:0,29,515	0/1:22,1:22:99:116,0,343	0/0:25,0:22:46.86:0,47,935	0/1:21,0:19:6.61:7,0,131	0/0:11,0:11:8.70:0,9,83	1/1:6,0:5:8.87:57,9,0	0/1:18,0:13:29.57:60,0,30	0/1:12,0:9:29:51,0,29	0/0:13,0:13:8.80:0,9,464	0/1:3,0:3:1.35:1,0,9
chr10	30956418	.	G	GA	1055.48	PASS	AB=0.805;AC=19;AF=0.339;AN=56;BaseQRankSum=7.149;DP=365;FS=38.727;HRun=0;HaplotypeScore=130.5007;InbreedingCoeff=-0.0250;MQ=37.75;MQ0=19;MQRankSum=-3.257;QD=6.10;ReadPosRankSum=-1.513;VQSLOD=1.5506;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:5,2:6:3.49:101,0,3	1/1:4,0:3:1.25:3,1,0	0/0:28,0:6:6.12:0,6,110	0/1:34,0:9:9.27:9,0,207	0/1:10,5:15:28.93:29,0,96	0/1:5,2:6:42.18:94,0,42	0/1:1,4:5:4.21:121,0,4	0/1:12,2:13:64.84:65,0,122	0/0:18,1:18:41.33:0,41,425	0/0:22,0:19:11.07:0,11,248	0/0:20,0:18:17.33:0,17,220	1/1:4,2:6:6.02:84,6,0	0/1:5,3:8:49.66:134,0,50	0/0:2,0:2:5.97:0,6,60	0/0:11,0:10:13.51:0,14,336	0/1:3,1:3:15.38:38,0,15	0/1:5,1:6:49.53:52,0,50	0/1:2,3:5:1.21:126,0,1	0/0:15,0:13:33.06:0,33,424	0/1:22,0:21:3.54:4,0,305	0/0:25,0:21:48.14:0,48,652	0/0:19,2:19:16.45:0,16,267	0/0:9,2:11:9.03:0,9,112	1/1:3,3:5:9.03:136,9,0	0/1:15,3:13:43.18:140,0,43	0/1:10,2:9:68.38:80,0,68	0/0:13,0:12:32.15:0,32,377	0/0:4,0:3:8.76:0,9,51
chr10	30956420	.	GGA	G	603.97	PASS	AB=0.969;AC=19;AF=0.339;AN=56;BaseQRankSum=6.576;DP=384;FS=70.079;HRun=0;HaplotypeScore=135.0649;InbreedingCoeff=-0.0101;MQ=34.85;MQ0=20;MQRankSum=-4.496;QD=2.92;ReadPosRankSum=-0.868;VQSLOD=-0.4398;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:8,0:7:2.84:65,0,3	0/0:4,0:3:2.22:0,2,7	0/1:26,0:5:9.72:10,0,104	0/1:36,0:9:7.08:7,0,214	0/1:14,1:15:0.10:0,0,125	0/1:8,0:7:22.72:23,0,86	0/1:6,0:6:13.56:49,0,14	1/1:15,1:14:31.37:151,31,0	0/0:18,0:18:51.08:0,51,704	0/0:24,0:19:34.70:0,35,396	0/0:21,0:19:13.23:0,13,354	1/1:6,0:6:5.94:49,6,0	0/1:6,2:8:70.74:105,0,71	0/0:2,0:2:6.02:0,6,85	0/0:11,0:10:28.65:0,29,488	0/1:5,0:4:22.98:23,0,24	0/1:5,1:6:30.18:65,0,30	0/1:5,0:5:4.30:58,0,4	0/0:15,0:13:30.08:0,30,478	0/0:24,0:23:25.05:0,25,472	0/0:26,0:22:51.16:0,51,900	0/1:21,0:20:15.37:15,0,351	0/0:11,2:13:9.03:0,9,124	1/1:6,0:5:8.74:51,9,0	0/1:21,0:16:51.91:52,0,172	0/1:12,0:9:43.39:43,0,71	0/0:13,0:12:30.09:0,30,513	0/0:5,0:4:2.18:0,2,79
chr10	30956447	.	G	GTA	292.72	PASS	AB=0.808;AC=7;AF=0.125;AN=56;BaseQRankSum=4.542;DP=318;FS=22.444;HRun=0;HaplotypeScore=114.1831;InbreedingCoeff=0.0945;MQ=40.09;MQ0=13;MQRankSum=-1.809;QD=7.70;ReadPosRankSum=-1.762;VQSLOD=1.3078;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:6,1:6:6.77:0,7,61	0/0:5,0:4:5.21:0,5,31	0/0:24,0:3:4.82:0,5,31	0/0:32,0:7:15.72:0,16,217	0/0:13,0:13:11.21:0,11,81	0/1:5,1:5:36.17:36,0,109	0/0:4,0:4:5.84:0,6,39	0/0:4,0:1:3.01:0,3,49	0/0:16,0:16:42.11:0,42,634	0/0:18,0:15:42.12:0,42,601	0/0:18,0:16:39.14:0,39,521	0/0:3,0:3:8.98:0,9,73	0/1:6,2:8:40.93:41,0,146	0/0:4,0:4:5.33:0,5,72	0/0:15,0:13:33.11:0,33,530	0/0:2,0:2:0.89:0,1,2	0/1:3,1:3:39.99:40,0,64	1/1:2,3:5:11.63:180,12,0	0/0:9,0:9:27.04:0,27,398	0/0:22,0:22:44.82:0,45,640	0/0:25,0:21:60.20:0,60,971	0/0:15,0:13:19.58:0,20,201	0/0:8,0:8:10.78:0,11,110	0/1:2,2:3:16.31:82,0,16	0/0:17,0:13:29.71:0,30,282	0/1:10,1:10:43.57:44,0,150	0/0:15,0:15:45.15:0,45,733	0/0:4,0:3:9.01:0,9,99
chr10	30956458	.	AGGAGG	A	2984.17	PASS	AB=0.750;AC=34;AF=0.607;AN=56;BaseQRankSum=5.370;DP=325;FS=47.771;HRun=0;HaplotypeScore=109.6760;InbreedingCoeff=0.6619;MQ=44.07;MQ0=12;MQRankSum=-7.231;QD=23.50;ReadPosRankSum=-1.432;VQSLOD=1.0336;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,1:7:10.08:198,10,0	1/1:5,0:5:8.80:113,9,0	0/0:28,0:4:8.19:0,8,112	0/0:33,0:9:21.02:0,21,379	1/1:9,1:10:15.05:253,15,0	1/1:7,2:8:2.81:189,3,0	1/1:3,1:4:3.77:113,4,0	0/1:4,4:7:10.20:268,0,10	0/0:18,0:18:42.62:0,43,1207	0/0:17,0:16:29.36:0,29,273	0/0:17,0:15:22.98:0,23,194	1/1:6,0:6:15.02:180,15,0	1/1:4,2:6:12.04:207,12,0	1/1:3,1:4:9.03:147,9,0	0/0:16,0:14:36.12:0,36,1079	1/1:0,3:3:3.01:62,3,0	1/1:2,1:2:6.02:109,6,0	1/1:4,0:4:9:126,9,0	0/0:8,0:8:21.07:0,21,337	0/0:17,0:17:33.73:0,34,436	0/0:28,0:25:74.22:0,74,1136	1/1:8,1:8:9.03:150,9,0	1/1:5,2:7:7.42:128,7,0	1/1:6,1:6:11.45:127,11,0	0/1:12,3:13:27.29:244,0,27	1/1:7,5:11:13.03:418,13,0	0/0:16,0:16:44.64:0,45,742	1/1:7,0:7:0.20:153,0,0
chr10	30956461	.	AG	A	1524.88	PASS	AB=1.000;AC=26;AF=0.464;AN=56;BaseQRankSum=-0.924;DP=322;FS=3.172;HRun=8;HaplotypeScore=94.8173;InbreedingCoeff=0.4969;MQ=47.60;MQ0=12;MQRankSum=0.968;QD=8.92;ReadPosRankSum=1.339;VQSLOD=1.9459;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:8:15.73:0,16,55	0/1:5,0:5:4.19:6,0,4	0/0:31,0:7:14.06:0,14,132	0/0:30,0:8:18.48:0,18,185	1/1:9,0:10:0.37:12,0,0	0/0:9,0:8:6.33:0,6,37	0/0:7,0:8:4:0,4,26	0/1:9,0:9:5:5,0,17	0/0:19,0:19:45.07:0,45,532	1/1:6,0:13:16.08:47,16,0	1/1:7,1:15:18.09:77,18,0	0/0:5,0:5:12.29:0,12,45	0/0:5,0:5:2.81:0,3,18	0/0:4,0:4:2.59:0,3,13	0/0:16,0:14:39.09:0,39,448	1/1:3,0:3:1.82:5,2,0	1/1:3,0:2:0.32:1,0,0	0/1:5,0:5:1.24:1,0,7	1/1:2,7:9:24.04:231,24,0	1/1:7,6:13:16.13:195,16,0	1/1:6,23:26:72.10:689,72,0	1/1:6,0:5:5.63:16,6,0	0/0:7,0:7:1.07:0,1,13	0/1:7,0:6:1.02:1,0,11	0/1:15,0:14:0.68:1,0,35	0/1:12,0:11:1.43:1,0,21	1/1:1,14:15:42.06:405,42,0	0/0:7,0:7:4.73:0,5,36
chr10	30956463	.	G	GA	3495.65	PASS	AB=0.814;AC=37;AF=0.661;AN=56;BaseQRankSum=6.257;DP=311;FS=63.432;HRun=0;HaplotypeScore=84.0121;InbreedingCoeff=0.6342;MQ=50.98;MQ0=11;MQRankSum=-7.130;QD=23.94;ReadPosRankSum=-1.887;VQSLOD=-0.4800;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,4:7:15.10:210,15,0	1/1:0,4:4:9.03:115,9,0	0/0:34,0:7:10.47:0,10,121	0/0:29,0:9:18.90:0,19,201	1/1:5,3:8:15.05:194,15,0	1/1:6,4:9:4.12:258,4,0	1/1:6,2:8:20.94:211,21,0	1/1:8,3:11:27.95:335,28,0	0/0:20,0:20:44.40:0,44,593	0/1:10,3:13:42.19:75,0,42	0/1:11,1:12:24.63:91,0,25	1/1:0,5:5:15.05:216,15,0	1/1:3,2:5:11.75:169,12,0	1/1:1,3:4:9.03:127,9,0	0/0:17,0:15:39.11:0,39,512	1/1:3,0:3:3.01:39,3,0	1/1:2,1:2:6.02:72,6,0	1/1:0,5:5:12.04:163,12,0	0/0:9,0:9:22.29:0,22,118	0/0:11,0:11:11.99:0,12,136	0/0:29,0:26:73.71:0,74,410	1/1:2,2:4:9.03:113,9,0	1/1:4,1:5:9.03:123,9,0	1/1:2,6:7:12.04:154,12,0	0/1:7,5:11:19.67:217,0,20	1/1:7,4:10:27.56:375,28,0	0/0:16,0:16:43.34:0,43,252	1/1:1,6:7:11.97:237,12,0
chr10	30958157	.	T	TAA	10671.56	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-12.016;DP=458;FS=1.301;HRun=6;HaplotypeScore=47.7160;InbreedingCoeff=0.9719;MQ=68.98;MQ0=0;MQRankSum=-0.067;QD=36.17;ReadPosRankSum=3.995;VQSLOD=4.1811;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,29:33:44.75:814,45,0	1/1:1,3:4:9.03:139,9,0	0/0:12,0:11:26.96:0,27,258	0/0:9,0:6:12.04:0,12,143	1/1:0,22:23:60.16:984,60,0	1/1:0,18:18:48.16:812,48,0	1/1:2,14:15:33.11:557,33,0	1/1:6,32:38:90.30:1488,90,0	0/0:6,0:6:12.04:0,12,146	0/0:23,0:23:63.19:0,63,759	0/0:18,0:18:48.14:0,48,572	1/1:2,11:13:30.10:488,30,0	1/1:2,6:8:18.06:304,18,0	1/1:2,10:13:24.08:406,24,0	0/0:20,0:20:51.12:0,51,579	1/1:3,13:16:33.11:558,33,0	1/1:1,24:25:51.17:862,51,0	1/1:3,6:9:15.05:254,15,0	0/0:19,0:19:57.15:0,57,671	0/0:22,0:22:63.20:0,63,767	0/0:10,0:10:30.07:0,30,352	1/1:2,6:8:18.06:303,18,0	1/1:3,8:11:18.06:304,18,0	1/1:1,6:7:15.05:254,15,0	1/1:2,15:18:39.13:660,39,0	1/1:2,17:19:17.58:825,18,0	0/0:24,0:24:63.19:0,63,768	1/1:0,16:16:39.13:660,39,0
chr10	30958434	.	A	AG	16621.32	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-15.727;DP=659;FS=0.640;HRun=1;HaplotypeScore=60.0615;InbreedingCoeff=0.9910;MQ=82.59;MQ0=0;MQRankSum=-0.829;QD=39.20;ReadPosRankSum=0.567;VQSLOD=5.3151;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,49:50:99:1835,123,0	1/1:0,8:8:24.08:353,24,0	0/0:23,0:23:57.17:0,57,724	0/0:15,0:15:38.60:0,39,495	1/1:0,21:21:60.20:898,60,0	1/1:2,13:15:33.11:494,33,0	1/1:0,32:32:90.30:1348,90,0	1/1:0,31:30:87.28:1266,87,0	0/0:22,0:22:54.18:0,54,700	0/0:31,0:31:90.29:0,90,1169	0/0:21,0:21:63.19:0,63,802	1/1:3,23:26:57.19:848,57,0	1/1:0,18:18:48.16:719,48,0	1/1:0,19:19:42.14:629,42,0	0/0:27,0:27:75.23:0,75,958	1/1:1,26:27:66.22:989,66,0	1/1:0,24:24:63.21:944,63,0	1/1:0,16:16:48.16:719,48,0	0/0:23,0:23:69.20:0,69,879	0/0:20,0:20:57.17:0,57,726	0/0:20,0:20:60.20:0,60,779	1/1:0,18:18:54.18:809,54,0	1/1:1,20:21:54.18:809,54,0	1/1:0,34:34:90.30:1349,90,0	1/1:0,24:24:57.19:854,57,0	1/1:0,37:37:99:1623,111,0	0/0:33,0:32:84.06:0,84,1090	1/1:0,3:3:9.03:135,9,0
chr10	30959102	.	AAT	A	10273.20	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=15.378;DP=496;FS=4.110;HRun=0;HaplotypeScore=94.3133;InbreedingCoeff=0.9779;MQ=50.17;MQ0=2;MQRankSum=-12.340;QD=35.67;ReadPosRankSum=-1.074;VQSLOD=6.3617;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,10:20:33.01:425,33,0	1/1:2,8:10:30.09:410,30,0	0/0:16,0:14:35.97:0,36,487	0/0:12,0:9:24.08:0,24,427	1/1:1,18:19:54.14:749,54,0	1/1:4,15:19:54.14:734,54,0	1/1:5,14:19:57.16:763,57,0	1/1:7,28:33:81.22:1089,81,0	0/0:20,0:20:60.19:0,60,1054	0/0:33,0:33:96.32:0,96,1724	0/0:14,0:14:39.13:0,39,711	1/1:6,7:13:30.08:395,30,0	1/1:2,11:13:39.05:500,39,0	1/1:1,15:16:48.10:645,48,0	0/0:29,0:29:81.23:0,81,1386	1/1:0,11:10:30.10:429,30,0	1/1:1,12:13:39.05:511,39,0	1/1:2,8:10:9.94:304,10,0	0/0:22,0:20:20.39:0,20,745	0/0:26,0:26:72.22:0,72,1253	0/0:20,0:20:57.20:0,57,1039	1/1:1,10:10:30.09:413,30,0	1/1:2,13:15:42.13:584,42,0	1/1:4,15:19:51.03:643,51,0	1/1:5,17:22:60.19:841,60,0	1/1:3,17:20:11.66:710,12,0	0/0:16,0:16:48.15:0,48,843	1/1:0,3:3:9.03:129,9,0
chr10	30959127	.	GA	G	9438.12	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=15.548;DP=511;FS=1.116;HRun=6;HaplotypeScore=89.4548;InbreedingCoeff=0.9459;MQ=56.49;MQ0=0;MQRankSum=-10.281;QD=30.45;ReadPosRankSum=-1.426;VQSLOD=4.5520;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,17:19:38.55:477,39,0	1/1:0,14:14:36.10:429,36,0	0/0:12,0:13:26.08:0,26,355	0/0:3,0:2:3.01:0,3,43	1/1:0,19:19:57.17:690,57,0	1/1:2,20:22:57.18:704,57,0	1/1:2,9:11:24.07:297,24,0	1/1:3,35:37:93.29:1143,93,0	0/0:20,0:20:57.19:0,57,820	0/0:32,0:32:96.32:0,96,1364	0/0:17,0:17:51.17:0,51,727	1/1:0,13:13:36.11:446,36,0	1/1:1,13:14:36.11:445,36,0	1/1:0,15:15:42.13:519,42,0	0/0:29,0:29:84.25:0,84,1171	1/1:2,13:14:27.08:332,27,0	1/1:1,12:13:33.10:406,33,0	1/1:0,8:8:18.06:219,18,0	0/0:25,0:25:72.22:0,72,986	0/0:26,0:26:75.25:0,75,1071	0/0:17,0:17:43.78:0,44,681	1/1:0,10:9:24.07:294,24,0	1/1:1,21:22:57.18:703,57,0	1/1:2,16:18:39.12:475,39,0	1/1:3,26:29:72.23:890,72,0	1/1:3,24:27:78.21:931,78,0	0/0:19,0:19:57.19:0,57,820	1/1:2,1:3:3.01:37,3,0
chr10	30959520	.	C	CA	4612.40	PASS	AB=1.000;AC=38;AF=0.679;AN=56;BaseQRankSum=6.959;DP=431;FS=3.141;HRun=8;HaplotypeScore=115.8814;InbreedingCoeff=0.7850;MQ=62.14;MQ0=9;MQRankSum=-5.070;QD=17.60;ReadPosRankSum=-0.248;VQSLOD=4.0207;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,16:19:21.06:235,21,0	1/1:7,5:12:18.05:203,18,0	0/0:27,0:12:17.87:0,18,143	0/0:26,0:12:12.38:0,12,110	1/1:8,6:13:21.06:232,21,0	1/1:4,7:10:27.08:310,27,0	1/1:9,7:16:24.54:274,25,0	1/1:15,7:21:41.87:445,42,0	0/0:17,0:17:12.76:0,13,230	0/0:21,0:20:38.98:0,39,345	0/0:21,0:20:38.24:0,38,313	1/1:5,7:12:33.09:374,33,0	1/1:7,4:11:26.97:286,27,0	1/1:2,7:9:12.03:136,12,0	0/0:23,0:23:20.82:0,21,192	1/1:4,5:9:27.07:301,27,0	1/1:11,3:13:21.06:239,21,0	1/1:1,9:10:18.52:205,19,0	0/0:19,0:19:44.33:0,44,352	0/1:17,0:17:21.12:69,0,21	0/0:14,0:14:9.26:0,9,95	1/1:4,1:5:6.02:69,6,0	1/1:3,9:12:21:197,21,0	1/1:1,7:8:18.05:202,18,0	1/1:7,4:11:24.06:266,24,0	1/1:7,8:14:36.10:407,36,0	0/1:27,0:27:43.02:43,0,119	1/1:2,6:8:11.82:117,12,0
chr10	30959529	.	C	CAA	1950.57	PASS	AB=1.000;AC=20;AF=0.357;AN=56;BaseQRankSum=-5.803;DP=438;FS=0.495;HRun=14;HaplotypeScore=122.8151;InbreedingCoeff=0.3435;MQ=53.20;MQ0=18;MQRankSum=-0.529;QD=7.96;ReadPosRankSum=-5.275;VQSLOD=-0.0481;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:17:21.52:0,22,101	0/1:8,0:8:14.47:14,0,26	0/0:29,0:7:5.51:0,6,31	0/1:30,0:13:7.26:7,0,55	0/1:16,0:14:17.70:18,0,43	0/0:12,0:11:12.81:0,13,60	0/0:10,0:10:11.56:0,12,50	0/1:25,0:22:24.24:24,0,79	0/0:13,0:16:7.68:0,8,212	1/1:26,0:26:51.65:393,52,0	1/1:22,0:21:47.56:351,48,0	0/0:12,0:12:20.11:0,20,101	0/1:9,0:9:6.88:11,0,7	0/0:7,0:7:11.29:0,11,52	0/0:22,0:22:43.61:0,44,325	0/0:9,0:9:12.57:0,13,63	0/0:13,0:12:1.86:0,2,6	0/0:14,0:13:13.25:0,13,68	1/1:25,3:28:45.55:489,46,0	1/1:12,2:17:39.09:387,39,0	1/1:3,2:6:5.85:48,6,0	0/1:4,0:4:0:0,0,0	0/0:12,0:12:3.63:0,4,75	0/0:8,0:8:0.19:0,0,25	0/0:11,0:11:6.38:0,6,65	0/1:21,0:20:3.37:3,0,78	1/1:17,3:21:44.69:368,45,0	0/1:8,0:8:11.25:11,0,21
chr10	30959532	.	A	AAAC	1952.23	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=-5.811;DP=441;FS=5.128;HRun=0;HaplotypeScore=136.2567;InbreedingCoeff=0.4354;MQ=51.45;MQ0=20;MQRankSum=-1.330;QD=16.98;ReadPosRankSum=-0.858;VQSLOD=3.2132;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:15:29.87:0,30,291	0/0:8,0:8:21.50:0,21,169	0/0:31,0:6:10.59:0,11,84	0/0:31,0:12:9.11:0,9,156	0/0:17,0:15:16.11:0,16,207	0/0:11,0:10:20.87:0,21,220	0/0:10,0:10:29.64:0,30,265	0/0:26,0:21:38.73:0,39,358	0/0:16,0:16:44.28:0,44,594	1/1:10,16:26:68.15:1083,68,0	1/1:8,14:21:54.10:884,54,0	0/0:13,0:13:36.31:0,36,328	0/0:9,0:9:23.19:0,23,144	0/0:7,0:7:15.02:0,15,151	0/0:23,0:23:57.15:0,57,812	0/0:10,0:10:23.75:0,24,227	0/0:13,0:12:17.32:0,17,103	0/0:14,0:13:29.47:0,29,256	0/1:27,0:25:36.67:37,0,194	0/1:16,0:16:42.72:81,0,43	0/0:6,0:6:6.90:0,7,45	0/0:3,0:3:5.64:0,6,27	0/0:13,0:13:26.20:0,26,209	0/0:9,0:9:21.10:0,21,196	0/0:10,0:10:12.54:0,13,171	0/1:23,0:21:4.99:5,0,229	0/0:22,0:22:4.98:0,5,95	0/0:8,0:8:12.80:0,13,115
chr10	30959542	.	AACC	A	1135.88	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=1.943;DP=447;FS=2.308;HRun=0;HaplotypeScore=138.9362;InbreedingCoeff=-0.2271;MQ=46.99;MQ0=26;MQRankSum=-5.950;QD=4.85;ReadPosRankSum=-8.368;VQSLOD=-0.0641;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:17,0:14:9.02:9,0,27	0/1:10,0:9:4.58:99,0,5	0/0:34,0:5:1.31:0,1,79	0/0:36,0:13:12.62:0,13,210	0/1:21,0:19:32.12:173,0,32	0/1:11,0:9:24.79:25,0,25	0/1:9,0:9:32.18:38,0,32	0/1:24,0:17:22.75:125,0,23	0/0:15,0:15:45.12:0,45,698	0/0:30,0:29:42.98:0,43,645	0/0:20,0:19:14.32:0,14,323	0/1:14,0:14:16.46:139,0,16	1/1:7,0:7:1.15:52,1,0	0/1:7,0:6:3.03:3,0,35	0/0:21,0:21:51.04:0,51,897	0/1:10,0:9:7.45:93,0,7	0/0:4,6:9:2.35:0,2,8	0/1:14,0:13:6.79:77,0,7	0/1:28,0:26:69.87:70,0,512	0/0:17,0:17:11.45:0,11,423	0/0:7,0:7:14.61:0,15,183	1/1:3,0:2:0.47:1,0,0	1/1:13,0:13:1.28:88,1,0	0/1:8,0:8:19.55:20,0,31	0/1:9,0:8:16.40:73,0,16	0/1:24,0:20:62.98:134,0,63	0/0:23,0:23:53.89:0,54,547	0/1:5,0:5:11.83:68,0,12
chr10	30959557	.	AAAAC	A	1675.82	PASS	AB=1.000;AC=30;AF=0.556;AN=54;BaseQRankSum=4.177;DP=353;FS=3.190;HRun=0;HaplotypeScore=121.9119;InbreedingCoeff=0.5119;MQ=40.14;MQ0=22;MQRankSum=-4.709;QD=8.91;ReadPosRankSum=0.087;VQSLOD=3.0290;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:11:4.21:23,4,0	1/1:7,0:6:8.78:61,9,0	0/0:26,0:7:14.98:0,15,202	0/0:24,0:9:5.98:0,6,47	1/1:14,0:12:11.62:80,12,0	0/1:10,0:8:2.77:21,0,3	1/1:5,0:4:3.45:23,3,0	0/0:17,0:10:4.99:0,5,17	0/0:12,0:12:21.05:0,21,451	1/1:9,20:29:57.11:863,57,0	1/1:7,12:19:33:458,33,0	1/1:9,0:9:11.74:75,12,0	0/1:5,0:5:6.49:6,0,18	1/1:7,0:6:5.03:30,5,0	0/1:21,0:21:7.74:8,0,609	1/1:8,0:6:4.59:23,5,0	0/0:9,0:6:2.88:0,3,15	./.	0/0:21,0:19:24.06:0,24,399	0/0:18,0:18:42.08:0,42,644	0/0:9,0:9:21.06:0,21,316	0/0:2,0:1:2.92:0,3,17	0/1:8,0:8:10.21:10,0,31	1/1:8,0:8:5.68:39,6,0	1/1:4,0:3:5.16:25,5,0	1/1:16,1:12:11.37:98,11,0	0/0:17,0:17:30.01:0,30,453	1/1:2,0:2:2.90:16,3,0
chr10	30959564	.	AC	A	910.31	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=11.534;DP=310;FS=0.000;HRun=1;HaplotypeScore=100.1576;InbreedingCoeff=0.8102;MQ=44.09;MQ0=14;MQRankSum=-8.822;QD=7.28;ReadPosRankSum=-1.267;VQSLOD=0.0643;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,3:8:16.76:94,17,0	1/1:5,1:5:2.79:38,3,0	0/0:23,0:7:18.53:0,19,270	0/0:22,0:10:20:0,20,214	1/1:11,0:10:17.65:96,18,0	1/1:8,2:8:14.86:76,15,0	1/1:5,0:4:9.33:58,9,0	1/1:5,4:4:8.47:53,8,0	0/0:13,0:13:39.12:0,39,564	0/0:29,0:29:28.59:0,29,366	0/0:17,0:17:20.88:0,21,236	1/1:8,0:8:22.64:135,23,0	1/1:5,0:5:9.57:67,10,0	1/1:3,2:4:7.69:34,8,0	0/0:20,1:21:52.75:0,53,786	1/1:5,2:5:11.25:53,11,0	1/1:5,2:4:4.48:21,4,0	1/1:7,0:6:9.40:64,9,0	0/0:14,0:13:3.48:0,3,436	0/0:16,0:16:45.15:0,45,683	0/0:11,0:11:33.08:0,33,474	0/0:2,0:1:0:0,0,0	1/1:6,0:6:9.39:53,9,0	1/1:8,0:8:18.11:100,18,0	1/1:2,1:2:5.92:39,6,0	1/1:13,2:10:16.57:93,17,0	0/0:17,0:17:50.98:0,51,683	1/1:2,0:2:5.93:40,6,0
chr10	30959568	.	AC	A	759.45	PASS	AB=0.857;AC=33;AF=0.589;AN=56;BaseQRankSum=10.968;DP=301;FS=0.579;HRun=1;HaplotypeScore=97.5261;InbreedingCoeff=0.7516;MQ=47.28;MQ0=13;MQRankSum=-8.612;QD=6.60;ReadPosRankSum=-0.355;VQSLOD=0.2491;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,3:7:13.17:79,13,0	0/1:5,1:5:1.58:32,0,2	0/0:23,0:9:22.76:0,23,298	0/0:23,0:10:20.28:0,20,260	1/1:10,0:9:1.99:68,2,0	1/1:7,2:7:12.68:60,13,0	1/1:4,0:4:4.46:43,4,0	1/1:2,4:3:5.98:47,6,0	0/0:13,0:13:39.10:0,39,559	0/0:28,0:28:28.43:0,28,377	0/0:16,0:16:19:0,19,218	1/1:8,0:8:23.36:140,23,0	1/1:5,0:5:8.54:59,9,0	1/1:3,2:4:7.84:34,8,0	0/0:22,0:22:52.73:0,53,766	1/1:5,2:5:9.49:40,9,0	1/1:6,2:5:4.17:20,4,0	1/1:7,0:6:9.40:64,9,0	0/0:16,0:15:14.75:0,15,456	0/0:16,0:16:48.16:0,48,703	0/0:12,0:12:36.11:0,36,511	0/0:2,0:1:2.22:0,2,7	1/1:6,0:6:7.28:42,7,0	1/1:7,0:7:16.84:95,17,0	1/1:2,1:2:5.92:39,6,0	1/1:10,2:9:15.34:86,15,0	0/0:15,0:15:45.09:0,45,632	1/1:0,0:1:2.74:12,3,0
chr10	30959572	.	AC	A	822.99	PASS	AB=1.000;AC=33;AF=0.589;AN=56;BaseQRankSum=10.297;DP=278;FS=8.665;HRun=1;HaplotypeScore=87.4047;InbreedingCoeff=0.7206;MQ=48.62;MQ0=11;MQRankSum=-7.994;QD=8.15;ReadPosRankSum=0.949;VQSLOD=0.4549;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,0:6:12.73:81,13,0	0/1:5,0:4:2.84:41,0,3	0/0:21,0:9:21.21:0,21,282	0/0:19,0:8:17.38:0,17,248	1/1:7,3:9:18.47:152,18,0	1/1:7,0:5:7.93:38,8,0	1/1:5,0:4:9.51:55,10,0	1/1:6,0:3:0.34:1,0,0	0/0:13,0:13:39.07:0,39,537	0/0:28,0:28:31.10:0,31,398	0/0:16,0:16:19.09:0,19,198	1/1:7,0:7:20.33:134,20,0	1/1:5,0:5:11.71:68,12,0	1/1:2,1:2:4.83:40,5,0	0/0:22,0:22:52.83:0,53,805	1/1:7,0:5:10.23:52,10,0	1/1:8,0:5:4.50:22,4,0	1/1:6,0:5:8.96:68,9,0	0/0:13,1:13:0.96:0,1,394	0/0:16,0:16:48.16:0,48,726	0/0:12,0:12:36.12:0,36,533	0/0:1,0:1:2.74:0,3,12	1/1:4,1:5:4.97:49,5,0	1/1:4,0:4:8.55:46,9,0	1/1:3,0:2:5.44:27,5,0	1/1:11,0:8:14.68:112,15,0	0/0:15,0:15:44.91:0,45,607	1/1:1,0:1:3.01:34,3,0
chr10	30959585	.	CAAAAAAA	C	997.28	PASS	AB=0.948;AC=32;AF=0.571;AN=56;BaseQRankSum=5.120;DP=280;FS=19.000;HRun=9;HaplotypeScore=114.8755;InbreedingCoeff=0.3115;MQ=57.25;MQ0=7;MQRankSum=-3.765;QD=6.52;ReadPosRankSum=-1.270;VQSLOD=-0.6013;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:5,0:3:2.92:17,3,0	1/1:5,0:4:7.43:79,7,0	0/0:16,0:10:27.09:0,27,642	0/0:15,0:8:23.34:0,23,363	0/1:11,0:11:13.47:153,0,13	1/1:8,0:7:11.77:70,12,0	1/1:7,0:6:9.39:79,9,0	0/1:12,0:10:5.94:6,0,64	0/0:11,0:11:33.11:0,33,1071	0/0:26,0:26:78.26:0,78,1247	0/0:17,0:17:48.13:0,48,733	1/1:6,0:6:13.82:175,14,0	1/1:5,0:5:5.20:57,5,0	0/1:4,0:3:9.12:16,0,9	0/0:15,0:15:42.13:0,42,1222	1/1:5,0:3:8.60:48,9,0	1/1:10,0:8:6.81:40,7,0	1/1:5,0:5:6.35:37,6,0	0/1:15,0:15:42.68:43,0,631	0/0:16,0:16:31.04:0,31,852	0/1:18,0:18:44.73:45,0,317	0/1:3,0:3:7.95:8,0,10	1/1:6,0:6:0.56:40,1,0	1/1:9,0:9:1.76:72,2,0	0/1:3,0:3:1.63:14,0,2	0/1:4,10:12:21.38:146,0,21	0/0:10,0:11:26.35:0,26,545	1/1:1,0:1:3.01:36,3,0
chr10	30959588	.	A	AC	1932.86	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-7.757;DP=296;FS=25.340;HRun=0;HaplotypeScore=85.9105;InbreedingCoeff=0.8156;MQ=57.58;MQ0=7;MQRankSum=2.873;QD=28.42;ReadPosRankSum=2.809;VQSLOD=2.3427;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:3:5.97:0,6,46	0/0:5,0:4:11.94:0,12,100	0/0:16,0:10:26.84:0,27,320	0/0:14,0:8:20.81:0,21,214	0/0:11,0:11:23.54:0,24,141	0/0:8,0:7:17.33:0,17,130	0/0:8,0:7:18.25:0,18,128	0/0:13,0:11:29.64:0,30,210	0/0:12,0:12:36.09:0,36,456	0/0:28,0:28:80.72:0,81,727	0/0:17,0:17:47.64:0,48,427	0/0:7,0:7:16.79:0,17,107	0/0:6,0:6:15.68:0,16,101	0/0:4,0:3:5.92:0,6,29	0/0:13,0:13:39.11:0,39,512	0/0:6,0:4:8.89:0,9,65	0/0:10,0:8:12.01:0,12,61	0/0:5,0:5:7.78:0,8,50	1/1:4,11:15:29.68:438,30,0	1/1:4,13:17:42.12:569,42,0	1/1:1,18:19:54.10:689,54,0	0/0:4,0:4:9.44:0,9,74	0/0:7,0:7:14:0,14,104	0/0:10,0:10:19.63:0,20,134	0/0:4,0:4:8.68:0,9,56	0/0:14,0:12:23.10:0,23,146	1/1:3,12:16:27.98:394,28,0	0/0:1,0:1:2.04:0,2,6
chr10	30959738	.	G	GCACA	1360.06	PASS	AB=0.870;AC=28;AF=0.519;AN=54;BaseQRankSum=4.907;DP=469;FS=0.000;HRun=0;HaplotypeScore=92.0868;InbreedingCoeff=0.4243;MQ=54.28;MQ0=26;MQRankSum=-1.226;QD=5.86;ReadPosRankSum=-2.566;VQSLOD=1.6221;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:21:10.81:77,11,0	1/1:10,0:10:8.43:68,8,0	0/0:49,0:7:5.75:0,6,133	0/0:52,0:6:2.91:0,3,91	1/1:12,0:12:13.58:157,14,0	1/1:11,0:16:2.51:18,3,0	0/1:23,0:24:12.87:126,0,13	0/0:10,0:9:0.87:0,1,2	0/0:7,0:7:18.06:0,18,314	0/0:9,0:9:24.08:0,24,379	0/0:10,0:10:27.08:0,27,416	0/1:9,0:9:25.71:36,0,26	1/1:8,0:8:5.39:40,5,0	1/1:8,1:9:12.01:165,12,0	0/0:10,0:10:17.59:0,18,295	1/1:6,0:6:2.38:16,2,0	0/1:24,3:25:28.46:160,0,28	0/1:7,7:18:12:191,0,12	0/0:14,0:14:39.10:0,39,537	0/0:9,0:9:27.09:0,27,442	0/0:45,0:43:87.25:0,87,1256	1/1:6,0:6:2.46:22,2,0	./.	1/1:10,18:31:5.94:133,6,0	1/1:6,1:14:6:94,6,0	1/1:16,0:15:8.26:193,8,0	0/0:12,0:12:0.06:0,0,330	1/1:3,0:3:3.01:42,3,0
chr10	30959741	.	CAT	C	1730.49	PASS	AB=0.995;AC=30;AF=0.556;AN=54;BaseQRankSum=-2.235;DP=478;FS=4.549;HRun=0;HaplotypeScore=72.0122;InbreedingCoeff=-0.1278;MQ=54.11;MQ0=27;MQRankSum=0.006;QD=4.41;ReadPosRankSum=-1.689;VQSLOD=1.9846;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:22:4.39:225,4,0	0/1:10,0:10:27.97:93,0,28	0/0:49,0:7:11.03:0,11,111	0/1:52,0:6:2.90:3,0,46	0/1:12,0:12:17.11:76,0,17	1/1:15,0:14:6.14:69,6,0	0/1:25,0:25:13.12:247,0,13	1/1:10,0:9:23:186,23,0	0/1:9,0:9:14.88:15,0,233	0/0:9,0:9:9.32:0,9,171	0/0:9,0:9:16.98:0,17,279	0/1:11,0:11:26.58:36,0,27	0/1:9,0:9:0.88:75,0,1	1/1:9,0:9:2.15:43,2,0	0/1:11,0:11:11.11:11,0,125	1/1:5,0:5:8.86:60,9,0	0/1:27,2:27:23.98:229,0,24	0/1:18,0:18:5.51:106,0,6	0/1:14,0:14:0.59:1,0,216	0/0:9,0:9:18.82:0,19,190	0/1:41,1:40:31.50:32,0,451	0/1:7,0:6:8.23:39,0,8	./.	0/1:34,0:33:9.25:57,0,9	1/1:14,0:14:7.16:72,7,0	1/1:18,0:17:12.67:194,13,0	0/1:13,0:13:4.69:5,0,142	0/1:3,0:3:10.84:17,0,11
chr10	30959743	.	TAC	T	255.03	PASS	AB=0.935;AC=11;AF=0.229;AN=48;BaseQRankSum=-2.007;DP=491;FS=2.386;HRun=0;HaplotypeScore=80.3351;InbreedingCoeff=0.2529;MQ=53.32;MQ0=28;MQRankSum=2.495;QD=1.83;ReadPosRankSum=-0.483;VQSLOD=1.8105;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:9.01:0,9,105	0/0:12,0:12:9.03:0,9,123	./.	./.	0/0:13,0:13:8.99:0,9,107	0/0:16,0:15:5.30:0,5,45	0/0:27,0:27:24.01:0,24,253	0/0:12,0:11:0.47:0,0,1	0/0:9,0:9:13.77:0,14,182	1/1:9,0:9:3.01:32,3,0	0/1:9,1:10:14.54:15,0,118	0/0:11,0:11:8.50:0,9,112	0/0:9,0:9:5.98:0,6,61	0/0:8,0:8:6:0,6,54	0/1:11,0:11:16.78:26,0,17	./.	0/1:27,0:25:18.26:18,0,157	0/0:19,0:19:18.01:0,18,175	0/1:13,3:16:0.60:85,0,1	1/1:8,1:9:3.48:34,3,0	1/1:36,9:42:4.06:146,4,0	0/0:10,0:9:3.01:0,3,41	./.	0/0:34,0:33:11.94:0,12,121	0/0:14,0:14:6:0,6,52	0/0:17,0:16:22.51:0,23,168	0/1:11,1:12:1.79:29,0,2	0/0:3,0:3:3.01:0,3,41
chr10	30959878	.	GAAAA	G	3559.96	PASS	AB=0.575;AC=33;AF=0.589;AN=56;BaseQRankSum=9.600;DP=457;FS=5.613;HRun=17;HaplotypeScore=76.2463;InbreedingCoeff=0.8203;MQ=47.21;MQ0=8;MQRankSum=-1.085;QD=13.28;ReadPosRankSum=6.910;VQSLOD=-0.0615;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,20:30:23.81:286,24,0	1/1:1,3:4:5.99:76,6,0	0/0:20,0:5:12.02:0,12,164	0/0:16,0:7:15.35:0,15,138	1/1:1,9:10:14.87:156,15,0	1/1:5,11:16:23.79:289,24,0	1/1:3,10:12:8.98:105,9,0	1/1:11,16:26:40.97:421,41,0	0/0:13,0:13:24.08:0,24,457	0/0:24,0:28:77.96:0,78,1181	0/0:17,0:21:45.89:0,46,668	1/1:2,11:14:11.80:130,12,0	1/1:6,9:16:17.69:213,18,0	1/1:3,5:9:11.96:133,12,0	0/0:20,0:20:39.10:0,39,579	1/1:5,6:10:17.84:198,18,0	1/1:5,20:25:29.98:380,30,0	1/1:4,10:15:17.96:213,18,0	0/0:16,0:20:48.15:0,48,865	0/0:6,0:15:30.86:0,31,475	0/0:11,0:12:21.07:0,21,384	1/1:3,8:12:10.48:142,10,0	0/0:1,5:6:0:0,0,1	1/1:4,19:22:20.64:266,21,0	1/1:5,6:11:5.90:69,6,0	0/1:6,15:21:11.47:369,0,11	0/0:5,0:16:9.03:0,9,153	1/1:2,5:6:9.03:114,9,0
chr10	30960750	.	T	TAC	1093.97	PASS	AB=0.956;AC=25;AF=0.625;AN=40;BaseQRankSum=1.131;DP=617;FS=10.324;HRun=0;HaplotypeScore=169.6351;InbreedingCoeff=0.2426;MQ=59.21;MQ0=18;MQRankSum=-4.022;QD=3.19;ReadPosRankSum=-0.535;VQSLOD=2.0635;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:43,0:43:2.99:35,3,0	./.	0/0:24,0:11:2.84:0,3,14	./.	./.	0/0:15,0:15:0.47:0,0,1	./.	1/1:27,0:22:11.70:69,12,0	0/0:30,0:30:41.62:0,42,408	0/1:36,0:39:31.76:32,0,78	0/0:13,0:20:2.51:0,3,14	./.	1/1:17,0:17:2.96:20,3,0	./.	0/0:34,0:34:47.68:0,48,477	1/1:17,0:17:2.68:11,3,0	1/1:19,0:18:2.96:19,3,0	1/1:9,0:9:2.92:17,3,0	0/1:20,2:21:14.02:169,0,14	0/1:19,1:20:57.50:57,0,88	1/1:55,6:57:4.34:413,4,0	./.	1/1:24,0:23:2.89:16,3,0	0/0:24,0:23:0:0,0,0	./.	1/1:20,0:20:21.03:126,21,0	1/1:14,3:16:3.23:198,3,0	1/1:8,0:8:6.78:39,7,0
chr10	30960760	.	C	CGG	3662.16	PASS	AB=0.556;AC=35;AF=0.625;AN=56;BaseQRankSum=4.597;DP=591;FS=23.845;HRun=0;HaplotypeScore=146.6297;InbreedingCoeff=0.7669;MQ=48.40;MQ0=26;MQRankSum=-6.457;QD=13.37;ReadPosRankSum=-5.164;VQSLOD=1.1030;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:22,7:29:27.57:375,28,0	1/1:1,7:7:5.93:40,6,0	0/0:19,0:6:15.04:0,15,185	0/0:20,0:10:27.04:0,27,364	1/1:2,15:16:5.69:53,6,0	1/1:0,14:15:15.01:151,15,0	1/1:8,3:9:6.02:70,6,0	1/1:18,4:16:42.13:645,42,0	0/0:32,0:32:81.28:0,81,1270	0/0:46,0:45:99:0,126,1497	0/0:23,0:22:32.61:0,33,458	1/1:11,7:16:24.07:321,24,0	1/1:1,13:13:8.88:120,9,0	1/1:0,15:15:6.01:61,6,0	0/0:36,0:35:78.16:0,78,1181	1/1:2,12:14:2.67:48,3,0	1/1:11,4:14:32.85:358,33,0	1/1:0,5:6:3.01:58,3,0	0/0:19,0:16:27.82:0,28,373	0/0:20,0:19:39.75:0,40,570	0/0:83,0:75:90.74:0,91,1047	1/1:0,14:16:11.85:104,12,0	1/1:10,12:21:18.62:241,19,0	1/1:13,4:16:12.51:168,13,0	1/1:2,6:6:3.01:34,3,0	0/1:4,16:19:65.72:542,0,66	0/0:19,0:18:37.09:0,37,472	1/1:0,7:7:18.06:274,18,0
chr10	30960769	.	A	ACG	243.10	PASS	AB=0.909;AC=21;AF=0.404;AN=52;BaseQRankSum=6.221;DP=553;FS=2.156;HRun=0;HaplotypeScore=143.0930;InbreedingCoeff=0.1629;MQ=41.85;MQ0=34;MQRankSum=-1.592;QD=0.80;ReadPosRankSum=4.792;VQSLOD=2.3674;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:20,3:21:3.40:18,3,0	./.	0/0:15,0:4:11.29:0,11,96	0/0:13,0:4:2.04:0,2,34	0/1:8,4:11:0.05:0,0,0	1/1:9,4:13:1.55:4,2,0	0/0:11,0:9:2.04:0,2,6	1/1:17,0:9:11.77:69,12,0	0/0:30,0:30:81.06:0,81,935	0/0:49,0:47:99:0,117,943	0/0:23,0:22:26.32:0,26,219	0/0:14,3:15:1.90:0,2,14	1/1:11,1:11:0.87:2,1,0	0/0:8,3:11:2.94:0,3,18	0/0:37,0:35:77.93:0,78,911	0/0:11,0:11:2.37:0,2,8	0/1:11,0:10:2.72:4,0,3	1/1:5,0:5:2.88:15,3,0	0/1:23,0:17:34.10:34,0,179	0/0:19,0:18:6.10:0,6,241	0/1:104,0:93:64.98:65,0,479	0/1:6,4:10:0:0,0,0	0/1:16,3:18:2.26:2,0,13	1/1:12,2:13:0.47:1,0,0	./.	0/1:15,0:14:33.34:85,0,33	0/1:20,0:19:28.54:29,0,233	0/1:5,1:6:6.23:46,0,6
chr10	30960797	.	ACG	A	77.96	PASS	AB=0.976;AC=14;AF=0.350;AN=40;BaseQRankSum=4.991;DP=443;FS=22.892;HRun=0;HaplotypeScore=94.3308;InbreedingCoeff=0.2166;MQ=40.26;MQ0=39;MQRankSum=-0.526;QD=0.30;ReadPosRankSum=-2.305;VQSLOD=-0.1391;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:7,2:7:3.01:0,3,54	./.	0/0:15,0:3:2.91:0,3,20	0/0:27,0:5:4.45:0,4,32	./.	./.	./.	1/1:12,0:3:8.71:48,9,0	0/1:29,0:29:55.43:55,0,736	0/1:44,0:40:38.34:38,0,910	0/0:18,0:17:23.74:0,24,393	0/1:9,0:7:0:0,0,0	1/1:5,0:4:2.50:9,2,0	./.	0/0:30,0:28:48.97:0,49,800	1/1:4,0:4:1.25:3,1,0	0/1:5,1:5:0.20:0,0,0	1/1:1,1:1:2.99:24,3,0	0/0:20,0:14:26.08:0,26,344	0/0:25,0:24:19.83:0,20,395	0/1:121,0:108:4.62:5,0,1374	./.	0/0:8,0:7:3.21:0,3,9	./.	./.	0/0:5,0:4:2.04:0,2,6	0/1:24,0:23:7.08:7,0,675	0/0:4,0:4:0.68:0,1,2
chr10	30960847	.	ATG	A	33.57	PASS	AB=0.889;AC=9;AF=0.300;AN=30;BaseQRankSum=4.012;DP=390;FS=4.118;HRun=0;HaplotypeScore=75.9049;InbreedingCoeff=0.3835;MQ=42.30;MQ0=26;MQRankSum=-1.613;QD=0.61;ReadPosRankSum=-2.596;VQSLOD=1.0879;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:38,1:5:14.79:0,15,207	0/0:47,1:9:23.68:0,24,362	./.	./.	./.	1/1:14,4:13:6.95:77,7,0	0/0:32,0:32:91.55:0,92,1810	0/0:45,0:42:99:0,106,2213	0/1:14,0:14:8.49:8,0,562	1/1:0,1:1:1.82:5,2,0	./.	./.	0/0:20,0:19:42.04:0,42,813	./.	0/0:3,1:3:2.81:0,3,40	0/1:1,1:2:4.54:19,0,5	0/1:17,0:12:12.75:13,0,218	0/0:20,0:20:12.58:0,13,148	0/0:88,1:77:66.90:0,67,774	./.	1/1:1,2:3:4.94:22,5,0	./.	./.	./.	0/0:16,0:16:22.62:0,23,141	./.
chr10	30960849	.	GCA	G	1035.95	PASS	AB=0.933;AC=9;AF=0.300;AN=30;BaseQRankSum=3.995;DP=380;FS=1.644;HRun=0;HaplotypeScore=68.7310;InbreedingCoeff=0.6050;MQ=42.36;MQ0=26;MQRankSum=-0.785;QD=6.82;ReadPosRankSum=-0.741;VQSLOD=2.8063;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:40,0:6:6.02:0,6,96	0/0:47,0:8:16.30:0,16,251	./.	./.	./.	0/0:16,0:11:0:0,0,1	0/0:32,0:32:87.26:0,87,1352	0/0:43,0:41:99:0,99,1441	0/1:13,1:14:6.98:7,0,390	0/0:1,0:1:1.25:0,1,3	./.	./.	0/0:18,0:17:36.11:0,36,557	./.	0/0:4,0:3:2.68:0,3,12	0/0:2,0:2:2.94:0,3,18	1/1:10,5:11:16.28:177,16,0	1/1:9,11:20:20.61:214,21,0	1/1:58,28:76:35.09:443,35,0	./.	0/0:3,0:3:1.46:0,1,14	./.	./.	./.	1/1:4,11:15:30.56:318,31,0	./.
chr10	30960866	.	GAC	G	1323.20	PASS	AC=8;AF=0.148;AN=54;BaseQRankSum=1.368;DP=609;FS=4.051;HRun=0;HaplotypeScore=130.6477;InbreedingCoeff=0.7387;MQ=40.11;MQ0=24;MQRankSum=1.592;QD=10.67;ReadPosRankSum=-0.917;VQSLOD=2.7663;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:32:9.03:0,9,154	0/0:7,0:7:12:0,12,174	0/0:59,1:13:31.35:0,31,491	0/0:65,0:10:16.71:0,17,196	0/0:11,0:11:0:0,0,0	0/0:11,0:11:12.04:0,12,199	0/0:11,0:11:18.06:0,18,309	0/0:16,0:13:36.12:0,36,616	0/0:38,0:38:93.25:0,93,1487	0/0:38,0:38:99:0,101,1426	0/0:14,0:14:33.10:0,33,512	0/0:12,0:12:14.57:0,15,236	0/0:16,0:16:6.01:0,6,102	0/0:14,0:14:8.83:0,9,148	0/0:19,0:18:48.11:0,48,725	0/0:22,0:21:21.06:0,21,343	0/0:13,0:13:17.80:0,18,264	0/0:9,0:9:17.46:0,17,253	1/1:6,9:14:27.04:312,27,0	1/1:7,10:17:8.97:115,9,0	1/1:39,36:65:65.61:813,66,0	0/0:14,0:14:3.01:0,3,51	0/0:11,0:11:5.93:0,6,103	./.	0/0:17,0:17:2.03:0,2,48	0/0:12,0:12:36.11:0,36,588	1/1:8,9:17:22.03:233,22,0	0/0:2,0:2:6.02:0,6,90
chr10	30960939	.	ATGCACACACACACG	A	4358.06	PASS	AB=0.746;AC=32;AF=0.571;AN=56;BaseQRankSum=13.835;DP=856;FS=0.442;HRun=0;HaplotypeScore=278.9266;InbreedingCoeff=0.8252;MQ=42.14;MQ0=32;MQRankSum=-12.641;QD=12.93;ReadPosRankSum=-5.087;VQSLOD=2.3090;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:17,6:23:5.12:31,5,0	1/1:7,2:9:15.22:93,15,0	0/0:69,0:13:36.11:0,36,855	0/0:71,0:11:30.09:0,30,570	0/1:14,5:19:0:0,0,0	1/1:15,4:19:11.72:72,12,0	1/1:17,1:18:3.68:22,4,0	1/1:10,0:7:17.99:179,18,0	0/0:42,0:41:99:0,105,5207	0/0:42,0:42:99:0,126,5547	0/0:13,0:13:39.13:0,39,1844	1/1:25,6:31:18.65:277,19,0	1/1:14,9:23:21.47:553,21,0	1/1:13,5:18:9.02:116,9,0	0/0:42,0:42:99:0,111,5415	1/1:21,6:27:30.78:412,31,0	1/1:10,1:11:15.28:231,15,0	1/1:6,1:7:19.23:279,19,0	0/0:18,0:12:36.07:0,36,1141	0/0:20,0:20:51.08:0,51,2798	0/0:173,0:162:99:0,314,14245	0/1:19,7:26:0:1,0,0	1/1:17,4:21:7.14:43,7,0	0/1:7,7:14:0:0,0,0	0/1:18,10:27:0:1,0,0	1/1:16,7:22:11.89:1551,12,0	0/0:20,0:20:59.85:0,60,3284	1/1:6,2:8:23.97:497,24,0
chr10	30960940	.	TGC	T	1160.48	PASS	AB=0.811;AC=24;AF=0.444;AN=54;BaseQRankSum=11.907;DP=856;FS=1.614;HRun=0;HaplotypeScore=188.8071;InbreedingCoeff=0.4640;MQ=42.22;MQ0=33;MQRankSum=-11.092;QD=4.28;ReadPosRankSum=-3.645;VQSLOD=2.4334;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:18,5:23:4.82:52,5,0	1/1:2,7:9:14.68:90,15,0	0/0:72,0:13:39.12:0,39,719	0/0:77,0:11:22.49:0,22,337	./.	1/1:13,6:19:9.06:56,9,0	0/1:11,7:18:3.16:15,0,3	0/1:9,1:7:11.47:78,0,11	0/0:40,0:39:99:0,105,2121	0/0:42,0:42:99:0,126,2410	0/0:13,0:13:39.10:0,39,714	1/1:17,12:29:0.69:82,1,0	1/1:17,6:23:0.77:89,1,0	1/1:12,6:18:8.69:56,9,0	0/0:43,0:43:99:0,114,2158	1/1:12,14:26:15.52:186,16,0	0/1:7,4:11:15.54:58,0,16	0/1:6,1:7:29.61:48,0,30	0/0:18,0:12:36.07:0,36,634	0/0:20,0:20:51.18:0,51,1033	0/0:176,0:164:99:0,318,6166	0/1:19,6:25:0:0,0,0	1/1:17,5:22:7.14:43,7,0	0/0:11,3:14:0:0,0,0	0/0:23,5:27:0.41:0,0,1	0/1:18,5:21:25.80:290,0,26	0/0:22,0:22:63.12:0,63,1151	1/1:3,5:8:23.63:193,24,0
chr10	30960959	.	ACAC	A	429.64	PASS	AB=0.813;AC=16;AF=0.286;AN=56;BaseQRankSum=8.420;DP=918;FS=2.776;HRun=0;HaplotypeScore=210.9636;InbreedingCoeff=0.0322;MQ=40.55;MQ0=40;MQRankSum=-6.169;QD=1.63;ReadPosRankSum=0.397;VQSLOD=2.5775;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:15,3:18:2.23:33,2,0	1/1:6,5:11:0.37:1,0,0	0/0:97,0:23:61.09:0,61,1123	0/0:95,1:13:21.80:0,22,414	0/0:20,3:23:5.94:0,6,41	0/1:17,6:23:3.97:4,0,34	0/1:17,4:21:6.01:6,0,14	0/0:12,0:11:31.77:0,32,176	0/0:37,0:36:96.33:0,96,2098	0/0:41,0:40:99:0,114,2416	0/0:14,0:14:36.12:0,36,764	0/1:21,9:30:17.30:17,0,27	0/1:16,6:22:25.42:90,0,25	0/1:15,3:18:0.02:0,0,0	0/0:42,0:42:99:0,99,2185	0/1:14,10:24:12.99:41,0,13	0/1:8,2:10:19.28:53,0,19	0/1:5,1:6:15.77:16,0,44	0/0:23,0:19:47.90:0,48,943	0/0:20,0:20:57.20:0,57,1239	0/0:179,0:169:99:0,332,7202	0/0:24,4:28:5.88:0,6,47	0/1:15,4:19:0:0,0,0	0/0:13,2:15:0:0,0,1	0/1:20,4:23:0.01:0,0,0	0/1:24,3:24:99:188,0,129	0/0:27,0:26:75.21:0,75,1597	0/1:7,4:11:31.75:112,0,32
chr10	30960967	.	CAT	C	2842.94	PASS	AB=0.568;AC=31;AF=0.554;AN=56;BaseQRankSum=12.168;DP=903;FS=2.729;HRun=0;HaplotypeScore=194.8201;InbreedingCoeff=0.7477;MQ=40.83;MQ0=35;MQRankSum=-7.728;QD=9.32;ReadPosRankSum=-1.910;VQSLOD=3.3504;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,13:18:2.79:14,3,0	1/1:5,4:9:1.36:3,1,0	0/0:96,0:23:30.10:0,30,790	0/0:98,0:14:18.10:0,18,352	1/1:4,20:24:9:114,9,0	1/1:7,17:24:9.89:127,10,0	1/1:7,14:21:15:167,15,0	1/1:0,16:16:45.03:608,45,0	0/0:35,0:35:97.14:0,97,1584	0/0:40,0:39:99:0,105,1901	0/0:15,0:15:30.10:0,30,562	1/1:10,18:28:11.81:153,12,0	1/1:6,16:22:15.34:261,15,0	1/1:5,12:17:2.96:25,3,0	0/0:38,0:38:93.16:0,93,1692	1/1:11,11:22:0.64:42,1,0	1/1:3,5:8:1.97:84,2,0	1/1:4,4:8:15.02:203,15,0	0/0:24,0:19:48.12:0,48,767	0/0:21,0:20:34.20:0,34,974	0/0:165,0:161:99:0,337,5883	1/1:6,22:28:9.02:117,9,0	0/0:4,14:17:0.89:0,1,2	0/0:6,11:17:0.44:0,0,1	0/1:6,19:24:0:0,0,0	1/1:5,20:24:56.36:930,56,0	0/0:29,0:28:78.02:0,78,1347	1/1:5,5:10:6.43:186,6,0
chr10	30961023	.	T	TCAC	1638.05	PASS	AB=0.708;AC=22;AF=0.393;AN=56;BaseQRankSum=7.868;DP=864;FS=2.641;HRun=0;HaplotypeScore=204.8556;InbreedingCoeff=-0.2972;MQ=46.33;MQ0=29;MQRankSum=2.470;QD=2.98;ReadPosRankSum=6.590;VQSLOD=2.3177;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:9,0:37:36.11:108,0,36	1/1:3,1:10:8.99:74,9,0	0/1:35,0:7:1.96:2,0,91	0/0:50,0:13:29.99:0,30,350	0/1:14,0:21:21.38:21,0,69	0/1:14,0:27:14.92:15,0,73	0/1:23,0:27:99:140,0,145	0/1:48,0:36:13.22:13,0,848	0/0:35,0:38:74.40:0,74,1559	0/1:16,2:52:99:216,0,669	0/0:5,0:23:21.44:0,21,138	0/1:25,0:34:63.95:64,0,109	0/1:7,0:21:43.80:128,0,44	0/1:9,0:26:0.27:66,0,0	0/0:35,0:35:85.13:0,85,1309	0/1:6,0:20:23.74:42,0,24	0/1:10,0:29:72.64:107,0,73	0/1:2,1:17:62.98:65,0,63	0/0:14,0:8:11.16:0,11,172	0/0:17,0:24:4.08:0,4,265	0/0:80,0:101:3.74:0,4,1506	0/1:18,1:36:99:133,0,157	0/1:15,0:20:1.14:99,0,1	1/1:6,1:24:11.72:99,12,0	0/1:17,0:21:10.94:162,0,11	0/1:17,0:25:99:188,0,197	0/0:11,0:25:3.96:0,4,324	0/1:2,1:14:55.29:55,0,83
chr10	30961167	.	T	TG	19441.99	PASS	AB=0.519;AC=35;AF=0.625;AN=56;BaseQRankSum=17.561;DP=795;FS=1.512;HRun=0;HaplotypeScore=125.8431;InbreedingCoeff=0.9325;MQ=92.42;MQ0=0;MQRankSum=-6.510;QD=40.34;ReadPosRankSum=3.831;VQSLOD=4.3254;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,42:44:99:1604,108,0	1/1:0,16:16:42.14:671,42,0	0/0:38,0:38:99:0,100,1355	0/0:33,0:33:90.15:0,90,1130	1/1:0,19:19:48.10:737,48,0	1/1:1,25:26:68.89:951,69,0	1/1:1,22:23:60.12:927,60,0	1/1:1,34:35:99:1599,102,0	0/0:22,0:22:66.22:0,66,921	0/0:38,0:38:99:0,114,1545	0/0:12,0:12:36.08:0,36,481	1/1:1,33:34:84.22:1302,84,0	1/1:2,20:22:51.10:773,51,0	1/1:2,24:26:69.17:1071,69,0	0/0:37,0:37:99:0,111,1512	0/1:2,25:27:8.78:967,0,9	1/1:0,38:38:99:1691,108,0	1/1:1,18:19:51.11:779,51,0	0/0:26,0:26:75.25:0,75,1047	0/0:29,0:29:78.20:0,78,1050	0/0:45,0:45:99:0,132,1826	1/1:0,29:29:87.07:1298,87,0	1/1:1,13:14:33.11:527,33,0	1/1:1,42:43:99:1724,108,0	1/1:0,18:18:42.07:640,42,0	1/1:1,33:34:60.37:1514,60,0	0/0:33,0:33:96.32:0,96,1340	1/1:0,15:15:42.14:667,42,0
chr10	30962945	.	AGT	A	773.58	PASS	AB=0.990;AC=27;AF=0.540;AN=50;BaseQRankSum=0.972;DP=687;FS=8.829;HRun=0;HaplotypeScore=116.5771;InbreedingCoeff=0.2574;MQ=60.65;MQ0=13;MQRankSum=-0.848;QD=1.81;ReadPosRankSum=1.258;VQSLOD=1.8414;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:39,0:38:2.70:9,3,0	./.	./.	./.	0/0:25,0:25:2.94:0,3,18	1/1:14,0:14:0.47:1,0,0	0/0:27,0:27:1.73:0,2,21	0/0:35,0:33:8.22:0,8,44	0/1:25,2:27:76.67:77,0,313	0/0:27,0:27:31.93:0,32,267	0/0:8,0:19:0:0,0,0	0/1:22,0:22:14.29:14,0,15	1/1:10,0:10:2.63:13,3,0	1/1:13,0:13:2.80:13,3,0	1/1:13,8:22:8.86:80,9,0	0/1:18,0:18:0:0,0,0	0/1:24,0:23:4.02:4,0,55	0/0:28,0:27:14.39:0,14,95	1/1:23,6:27:13.12:97,13,0	1/1:10,16:28:0.94:140,1,0	1/1:58,4:62:15.54:364,16,0	0/1:27,0:27:0.01:0,0,0	0/0:25,0:24:0:0,0,0	1/1:32,0:32:2.80:13,3,0	0/1:22,0:22:4.17:4,0,23	0/1:20,0:20:15.85:17,0,16	1/1:7,10:17:5.35:65,5,0	0/0:9,0:9:6.92:0,7,50
chr10	30962978	.	GTGTGTGTA	G	3036.60	PASS	AB=0.635;AC=33;AF=0.589;AN=56;BaseQRankSum=-2.193;DP=633;FS=0.000;HRun=0;HaplotypeScore=139.1993;InbreedingCoeff=0.6458;MQ=53.17;MQ0=16;MQRankSum=1.614;QD=7.79;ReadPosRankSum=-1.348;VQSLOD=2.3984;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:39,0:37:56.90:558,57,0	1/1:6,0:6:8.99:75,9,0	0/0:36,0:11:30.88:0,31,289	0/0:35,0:14:31.85:0,32,310	0/1:5,20:25:0:0,0,0	1/1:12,0:12:17.41:137,17,0	1/1:7,17:24:2.70:66,3,0	1/1:26,0:24:53.90:400,54,0	0/0:22,0:22:48.53:0,49,1128	0/0:25,0:25:5.42:0,5,866	0/0:15,0:15:5.92:0,6,41	1/1:19,0:19:32.72:380,33,0	1/1:1,12:13:2.77:81,3,0	1/1:1,11:12:3.01:81,3,0	0/0:18,0:18:27.01:0,27,338	0/1:1,14:15:0:0,0,0	0/1:4,18:22:17.96:75,0,18	1/1:24,0:23:38.12:326,38,0	0/0:14,0:13:16.84:0,17,325	0/1:33,0:33:6.94:7,0,568	0/0:62,0:60:68.38:0,68,1531	0/1:4,18:21:0:0,0,0	1/1:21,1:20:13.86:190,14,0	1/1:3,34:37:3.01:81,3,0	1/1:12,3:16:14.57:194,15,0	1/1:1,14:15:32.09:374,32,0	0/0:16,0:16:23.48:0,23,271	1/1:8,0:8:19.29:198,19,0
chr10	30962980	.	GTGTGTA	G	2471.46	PASS	AB=1.000;AC=33;AF=0.589;AN=56;BaseQRankSum=-0.989;DP=627;FS=1.487;HRun=0;HaplotypeScore=128.5182;InbreedingCoeff=0.6375;MQ=53.62;MQ0=15;MQRankSum=-1.439;QD=6.49;ReadPosRankSum=-2.742;VQSLOD=2.1441;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:39,0:37:56.23:467,56,0	1/1:6,1:7:11.99:100,12,0	0/0:34,0:12:33.88:0,34,320	0/0:30,0:14:31.85:0,32,310	0/1:25,0:25:0:0,0,0	1/1:12,0:12:14.92:124,15,0	1/1:22,1:23:2.97:35,3,0	1/1:28,0:26:60.89:457,61,0	0/0:21,0:21:49.26:0,49,887	0/1:25,0:25:10.47:10,0,664	0/0:16,0:16:8.91:0,9,66	1/1:18,1:19:32.22:309,32,0	1/1:13,0:13:2.64:49,3,0	1/1:12,0:12:3.01:49,3,0	0/0:18,0:18:26.59:0,27,252	0/1:15,0:15:0:0,0,0	0/1:21,0:21:17.97:43,0,18	1/1:21,1:21:33.88:229,34,0	0/0:14,0:13:3.59:0,4,213	0/0:33,0:33:25.01:0,25,420	0/0:61,0:59:37.76:0,38,975	0/1:22,0:21:0.01:0,0,0	1/1:23,0:21:9.01:155,9,0	1/1:37,0:37:3.01:49,3,0	1/1:15,0:15:12.12:182,12,0	1/1:15,0:15:29.38:280,29,0	0/0:16,0:16:23.26:0,23,221	1/1:8,0:8:17.74:123,18,0
chr10	30962984	.	GTA	G	2781.57	PASS	AB=0.995;AC=37;AF=0.661;AN=56;BaseQRankSum=3.090;DP=601;FS=5.558;HRun=0;HaplotypeScore=97.5187;InbreedingCoeff=0.3493;MQ=55.15;MQ0=11;MQRankSum=0.411;QD=5.92;ReadPosRankSum=-0.723;VQSLOD=2.4565;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:35,0:33:62.79:499,63,0	1/1:7,0:7:11.99:100,12,0	0/0:36,0:15:43.26:0,43,408	0/0:33,0:17:40.85:0,41,399	0/1:23,0:23:0:0,0,0	1/1:12,0:12:26.88:218,27,0	1/1:18,0:18:2.92:17,3,0	1/1:15,8:22:61.13:460,61,0	0/1:20,1:21:31.14:31,0,439	0/1:28,0:28:57.75:58,0,345	0/0:12,0:12:8.91:0,9,66	1/1:19,0:19:32.39:252,32,0	1/1:12,0:12:2.53:21,3,0	1/1:12,0:12:2.98:21,3,0	0/0:19,0:19:10.88:0,11,201	0/1:14,0:14:0.23:0,0,0	0/1:20,0:20:15.22:15,0,18	1/1:20,0:19:34.17:251,34,0	0/1:15,0:14:5.85:6,0,155	0/0:31,0:31:12.55:0,13,226	0/1:58,0:56:99:259,0,323	0/1:21,0:20:0.01:0,0,0	1/1:23,0:21:27.52:188,28,0	1/1:36,0:36:2.98:21,3,0	1/1:15,0:15:16.06:179,16,0	1/1:14,0:14:29.33:218,29,0	0/1:16,0:16:17.82:18,0,112	1/1:8,0:8:16.12:120,16,0
chr10	30963572	.	A	AT	15406.64	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-14.711;DP=693;FS=10.991;HRun=3;HaplotypeScore=65.5525;InbreedingCoeff=0.9681;MQ=87.21;MQ0=0;MQRankSum=-4.767;QD=34.86;ReadPosRankSum=2.599;VQSLOD=4.9808;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,57:61:99:2058,147,0	1/1:0,11:11:30.06:398,30,0	0/0:22,0:22:54.14:0,54,634	0/0:27,0:27:54.16:0,54,694	1/1:3,18:21:51.08:670,51,0	1/1:1,18:19:48.16:672,48,0	1/1:2,31:33:90.27:1239,90,0	1/1:1,30:31:81.24:1090,81,0	0/0:26,0:26:72.20:0,72,850	0/0:28,0:28:75.22:0,75,890	0/0:14,0:14:42.13:0,42,504	1/1:0,39:40:99:1481,108,0	1/1:2,20:22:51.17:714,51,0	1/1:0,15:15:45.15:630,45,0	0/0:30,0:30:87.27:0,87,1044	1/1:0,18:18:54.15:735,54,0	1/1:0,30:30:75.25:1050,75,0	1/1:0,15:15:39.13:546,39,0	0/0:23,0:23:69.20:0,69,817	0/0:17,0:17:45.12:0,45,526	0/0:39,0:39:99:0,114,1368	1/1:0,24:25:63.12:835,63,0	1/1:1,19:20:45.15:630,45,0	1/1:5,24:29:66.22:924,66,0	1/1:0,16:16:42.14:588,42,0	1/1:4,23:27:1.68:854,2,0	0/0:25,0:24:72.22:0,72,864	1/1:1,8:9:21.07:294,21,0
chr10	30963755	.	A	ACGAG	2563.39	PASS	AB=0.747;AC=23;AF=0.411;AN=56;BaseQRankSum=0.396;DP=583;FS=1.857;HRun=0;HaplotypeScore=140.7752;InbreedingCoeff=0.3797;MQ=50.80;MQ0=4;MQRankSum=-5.790;QD=10.09;ReadPosRankSum=-1.038;VQSLOD=3.0636;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:29,9:37:22.22:355,0,22	1/1:7,0:7:3.01:63,3,0	0/0:14,0:4:4.34:0,4,45	0/0:19,0:10:1.63:0,2,187	1/1:15,5:20:6.02:112,6,0	1/1:10,0:10:6.02:124,6,0	0/0:15,20:35:5.37:0,5,133	0/1:10,7:14:28.62:502,0,29	0/0:20,0:20:57.20:0,57,1080	0/0:17,0:17:50.53:0,51,721	0/0:18,0:18:41.91:0,42,665	1/1:20,0:20:6.91:149,7,0	1/1:11,0:10:3.01:63,3,0	1/1:20,0:20:8.95:68,9,0	0/0:15,0:15:45.15:0,45,861	1/1:14,0:14:6:80,6,0	0/1:6,19:25:2.79:201,0,3	1/1:17,0:16:3.01:66,3,0	0/0:18,0:17:51.16:0,51,894	0/0:22,0:22:36.08:0,36,598	0/0:72,0:72:99:0,189,3338	0/0:15,6:22:6:0,6,63	0/0:9,11:20:0.47:0,0,1	0/0:22,0:22:0.31:0,0,0	1/1:13,0:13:4.83:40,5,0	0/1:15,14:29:95.98:813,0,96	0/0:14,0:14:42.13:0,42,747	0/1:10,0:10:22.91:97,0,23
chr10	30963757	.	G	GAGCGCACACACACACACACA	9217.13	PASS	AB=0.750;AC=32;AF=0.615;AN=52;BaseQRankSum=-3.642;DP=634;FS=2.999;HRun=0;HaplotypeScore=201.6337;InbreedingCoeff=0.6829;MQ=49.56;MQ0=6;MQRankSum=-7.424;QD=25.32;ReadPosRankSum=-2.849;VQSLOD=3.5684;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:34,0:32:24.51:425,25,0	1/1:0,6:11:3.01:284,3,0	1/1:16,0:4:5.64:26,6,0	0/1:18,0:10:14.96:15,0,88	1/1:21,0:20:6.02:112,6,0	1/1:0,7:21:6.02:527,6,0	1/1:34,0:34:26.12:973,26,0	1/1:16,0:12:30.10:993,30,0	0/0:20,0:21:58.08:0,58,2352	0/0:5,0:18:51.09:0,51,1732	0/0:7,0:18:41.76:0,42,1500	1/1:2,13:34:6.02:375,6,0	1/1:0,8:12:3.01:290,3,0	./.	0/0:15,0:15:45.15:0,45,2139	0/1:0,6:22:0:1,0,0	1/1:24,0:24:28.88:1298,29,0	1/1:3,8:23:9.03:881,9,0	0/0:18,0:19:57.12:0,57,1606	0/0:13,0:21:36.12:0,36,1245	0/0:61,0:72:99:0,189,7163	1/1:20,0:20:6.01:75,6,0	./.	0/0:0,10:27:0.47:0,0,2	1/1:0,11:19:3.01:258,3,0	1/1:26,0:25:71.53:2319,72,0	0/0:13,0:14:42.08:0,42,1778	1/1:0,1:10:6.02:365,6,0
chr10	30964228	.	CTCTCTCTCTCTT	C	878.80	PASS	AB=1.000;AC=18;AF=0.375;AN=48;BaseQRankSum=-3.439;DP=427;FS=12.793;HRun=0;HaplotypeScore=110.4151;InbreedingCoeff=0.1303;MQ=37.40;MQ0=61;MQRankSum=-1.829;QD=4.05;ReadPosRankSum=-0.726;VQSLOD=1.3267;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:19:3.90:21,4,0	1/1:4,1:5:3.01:101,3,0	./.	0/0:10,0:3:0.47:0,0,1	./.	./.	0/1:23,0:18:3.07:54,0,3	0/1:22,0:22:22.49:213,0,22	0/0:17,0:16:20.48:0,20,426	0/1:21,0:18:10.51:11,0,1197	0/1:15,0:13:6.37:6,0,263	0/0:18,1:17:0.87:0,1,2	1/1:14,0:14:2.75:19,3,0	0/0:12,0:9:0.47:0,0,1	0/0:21,0:20:12.66:0,13,198	0/0:15,0:13:2.02:0,2,5	1/1:27,0:22:25.88:276,26,0	0/1:13,0:12:7.14:230,0,7	0/0:19,0:17:10.91:0,11,632	0/1:15,0:11:7.45:7,0,25	0/1:21,0:17:5.40:5,0,217	0/0:6,0:5:0:0,0,0	./.	0/0:24,0:15:0.47:0,0,1	0/0:4,2:4:0:0,0,0	0/1:9,0:8:32.89:33,0,153	0/0:17,0:15:16.78:0,17,354	1/1:11,0:8:8.51:33,9,0
chr10	30964230	.	CTCTCTCTCTT	C	1419.31	PASS	AB=1.000;AC=29;AF=0.580;AN=50;BaseQRankSum=-4.001;DP=409;FS=19.387;HRun=0;HaplotypeScore=98.1389;InbreedingCoeff=0.2619;MQ=37.01;MQ0=60;MQRankSum=-2.639;QD=4.91;ReadPosRankSum=-0.284;VQSLOD=0.6293;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:19,2:19:6.42:44,6,0	1/1:5,0:5:3.01:92,3,0	./.	0/0:7,0:3:0.47:0,0,1	./.	1/1:5,10:12:2.94:18,3,0	1/1:22,1:18:8.73:89,9,0	1/1:21,0:21:36.24:302,36,0	0/0:17,0:16:20.48:0,20,353	0/1:20,0:17:11.35:11,0,968	0/1:16,0:14:2.14:2,0,253	1/1:17,1:16:5.52:47,6,0	1/1:13,0:13:2.80:38,3,0	0/1:12,0:9:0:0,0,0	0/0:21,0:20:12.48:0,12,174	1/1:14,0:12:2.57:20,3,0	1/1:25,1:22:34.46:429,34,0	1/1:10,2:11:15.35:343,15,0	0/1:18,0:16:13.32:13,0,456	0/1:14,0:10:6.56:7,0,26	0/1:20,0:16:5.26:5,0,168	0/0:5,0:4:0:0,0,0	./.	0/0:24,0:15:0.47:0,0,1	0/0:6,0:4:0:0,0,0	0/1:9,0:8:60.69:61,0,101	0/0:16,0:14:16.76:0,17,267	1/1:11,0:8:9.47:39,9,0
chr10	30964252	.	CTCTGTG	C	315.37	PASS	AB=0.931;AC=16;AF=0.381;AN=42;BaseQRankSum=3.045;DP=356;FS=0.000;HRun=0;HaplotypeScore=86.0503;InbreedingCoeff=0.2407;MQ=32.93;MQ0=59;MQRankSum=-2.295;QD=1.93;ReadPosRankSum=-1.512;VQSLOD=1.3461;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:20,0:18:0.01:0,0,0	1/1:2,0:2:2.80:13,3,0	./.	./.	./.	./.	0/0:17,0:12:0.94:0,1,3	1/1:19,0:19:0.85:2,1,0	0/0:16,0:15:11.69:0,12,187	0/0:21,0:18:47.88:0,48,573	0/0:16,0:14:15:0,15,243	0/0:12,0:10:0.47:0,0,1	0/1:8,0:8:0:0,0,0	0/0:10,0:8:0:0,0,0	0/0:20,0:18:7.57:0,8,75	1/1:10,0:8:2.34:12,2,0	1/1:20,0:14:12.21:56,12,0	0/1:15,0:13:3.66:36,0,4	0/1:6,14:18:13.19:168,0,13	1/1:13,0:10:3.34:46,3,0	0/1:26,0:19:62.40:62,0,68	./.	./.	0/0:22,0:13:0:0,0,0	./.	0/0:11,0:9:3.44:0,3,21	0/1:10,0:9:27.58:33,0,28	0/0:9,0:5:0.94:0,1,1
chr10	30964777	.	CTT	C	1667.11	PASS	AB=0.827;AC=27;AF=0.482;AN=56;BaseQRankSum=1.054;DP=503;FS=4.903;HRun=16;HaplotypeScore=69.4826;InbreedingCoeff=0.2780;MQ=70.88;MQ0=3;MQRankSum=1.213;QD=5.07;ReadPosRankSum=4.952;VQSLOD=-0.6526;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:22,14:37:13.36:146,0,13	0/1:3,3:8:8.71:59,0,9	0/0:30,0:15:21.26:0,21,178	0/1:12,0:7:0.71:1,0,13	0/1:15,4:20:1.94:71,0,2	1/1:8,9:19:23.28:215,23,0	0/1:13,3:16:8.11:85,0,8	1/1:20,9:31:5.87:175,6,0	0/0:13,0:14:26.34:0,26,209	0/0:18,0:19:29.18:0,29,276	0/0:14,0:15:35.99:0,36,279	0/1:10,0:10:17.42:18,0,17	0/1:11,1:12:5.12:40,0,5	0/1:19,3:23:55.49:96,0,55	0/0:23,0:24:51.89:0,52,431	0/1:8,1:10:6:6,0,21	0/1:16,8:24:8.33:85,0,8	1/1:12,3:17:19.88:144,20,0	0/0:22,0:24:17.73:0,18,158	0/0:13,1:21:15.92:0,16,214	0/0:6,0:9:7.74:0,8,41	1/1:11,3:14:20.66:171,21,0	1/1:5,4:9:7.08:72,7,0	1/1:17,2:20:14.07:106,14,0	1/1:7,8:15:5.54:149,6,0	0/1:16,6:23:21.02:77,0,21	0/0:13,0:17:32.95:0,33,217	1/1:3,5:9:17.64:137,18,0
chr10	30965421	.	AC	A	11346.05	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=10.272;DP=681;FS=0.977;HRun=7;HaplotypeScore=73.8391;InbreedingCoeff=0.9992;MQ=88.84;MQ0=0;MQRankSum=-5.504;QD=26.95;ReadPosRankSum=5.319;VQSLOD=5.2074;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,41:45:99:1224,120,0	1/1:4,10:14:24.05:244,24,0	0/0:29,0:29:65.80:0,66,772	0/0:27,1:29:23.30:0,23,552	1/1:1,15:16:42.10:428,42,0	1/1:1,18:19:51.11:520,51,0	1/1:3,19:22:57.12:581,57,0	1/1:4,30:34:87.19:888,87,0	0/0:24,0:24:69.21:0,69,857	0/0:31,0:31:81.25:0,81,1007	0/0:18,0:18:45.14:0,45,566	1/1:3,26:29:75.17:765,75,0	1/1:1,20:21:57.13:581,57,0	1/1:2,28:30:81.18:826,81,0	0/0:34,0:34:90.29:0,90,1132	1/1:2,26:28:78.18:796,78,0	1/1:0,26:26:72.16:734,72,0	1/1:2,18:20:48.11:490,48,0	0/0:24,0:24:57.18:0,57,717	0/0:16,0:16:45.12:0,45,542	0/0:33,0:33:93.28:0,93,1155	1/1:1,18:19:51.12:520,51,0	1/1:1,22:23:66.15:673,66,0	1/1:1,22:23:60.14:612,60,0	1/1:0,17:17:51.12:520,51,0	1/1:1,21:22:63.13:637,63,0	0/0:22,0:22:57.18:0,57,716	1/1:0,13:13:30.07:306,30,0
chr10	30967066	.	G	GT	2394.98	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-9.743;DP=548;FS=5.110;HRun=6;HaplotypeScore=76.0121;InbreedingCoeff=0.9940;MQ=87.34;MQ0=0;MQRankSum=-0.169;QD=28.86;ReadPosRankSum=-0.059;VQSLOD=4.1902;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:66.02:0,66,647	0/0:8,0:8:24.05:0,24,245	0/0:23,0:23:49.45:0,49,561	0/0:18,0:18:31.30:0,31,325	0/0:31,0:31:87.12:0,87,861	0/0:16,0:16:45.09:0,45,452	0/0:11,0:11:30.05:0,30,299	0/0:35,0:35:93.20:0,93,945	0/0:14,0:14:36.08:0,36,367	0/0:30,0:30:81.18:0,81,826	0/0:18,0:18:54.12:0,54,547	0/0:9,0:9:24.05:0,24,245	0/0:19,0:19:51.11:0,51,520	0/0:13,0:13:36.08:0,36,367	0/0:20,0:20:48.09:0,48,483	0/0:21,0:21:63.13:0,63,636	0/0:22,0:22:63.12:0,63,634	0/0:21,0:21:60.11:0,60,603	1/1:2,14:16:42.12:516,42,0	1/1:4,26:30:72.23:906,72,0	1/1:1,7:8:15.05:189,15,0	0/0:13,0:13:33.07:0,33,337	0/0:23,0:23:66.13:0,66,662	0/0:18,0:18:51.11:0,51,520	0/0:19,0:19:57.13:0,57,582	0/0:23,0:23:69.04:0,69,680	1/1:3,26:27:75.24:943,75,0	0/0:16,0:16:48.11:0,48,490
chr10	30967604	.	T	TCTCCTTCCATCATACCCA	77049.60	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=1.752;DP=715;FS=0.295;HRun=0;HaplotypeScore=302.8223;InbreedingCoeff=0.9934;MQ=65.91;MQ0=0;MQRankSum=-20.277;QD=168.23;ReadPosRankSum=0.722;VQSLOD=4.4202;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:19,8:32:69.24:5119,69,0	1/1:9,4:15:39.13:2401,39,0	0/0:22,0:21:56.95:0,57,1666	0/0:26,0:26:72.69:0,73,2962	1/1:15,10:26:60.20:4047,60,0	1/1:30,14:49:99:8276,123,0	1/1:16,6:25:63.22:4463,63,0	1/1:30,0:27:69.22:3750,69,0	0/0:19,0:19:51.17:0,51,2285	0/0:34,0:34:96.32:0,96,4559	0/0:21,0:21:63.20:0,63,2786	1/1:16,8:29:69.24:5125,69,0	1/1:13,10:25:66.23:5342,66,0	1/1:17,13:31:87.30:6583,87,0	0/0:27,0:27:78.24:0,78,3554	1/1:14,13:30:81.28:5567,81,0	1/1:11,4:19:11.03:3246,11,0	1/1:4,3:8:21.07:1425,21,0	0/0:14,0:14:39.13:0,39,1642	0/0:41,0:41:99:0,114,5518	0/0:30,0:30:90.29:0,90,4239	1/1:24,9:38:99:5894,99,0	1/1:15,6:24:38.81:2673,39,0	1/1:7,2:10:24.08:1635,24,0	1/1:17,9:28:69.23:4660,69,0	1/1:14,8:25:72.25:4686,72,0	0/0:23,0:22:66.23:0,66,3229	1/1:8,4:14:33.11:2159,33,0
chr10	30969503	.	T	TTG	13188.62	PASS	AB=1.000;AC=37;AF=0.661;AN=56;BaseQRankSum=-4.161;DP=489;FS=0.745;HRun=0;HaplotypeScore=81.1778;InbreedingCoeff=0.9461;MQ=68.43;MQ0=6;MQRankSum=-2.992;QD=41.21;ReadPosRankSum=3.128;VQSLOD=6.7791;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,13:17:42.03:659,42,0	1/1:1,7:8:24.08:403,24,0	0/0:19,0:13:20.23:0,20,273	0/1:15,0:8:1.29:1,0,92	1/1:2,23:25:63.18:1019,63,0	1/1:2,15:17:51.17:866,51,0	1/1:0,8:8:21.07:346,21,0	1/1:7,21:28:59.56:1140,60,0	0/0:18,0:18:54.15:0,54,739	0/0:22,0:22:66.15:0,66,875	0/0:19,0:19:48.16:0,48,697	1/1:4,14:18:47.96:720,48,0	1/1:1,12:13:36.12:616,36,0	1/1:2,10:12:33.11:567,33,0	0/0:19,0:19:54.16:0,54,748	1/1:7,18:26:49.09:1046,49,0	1/1:1,12:13:32.98:532,33,0	1/1:0,9:9:24.08:408,24,0	0/0:12,0:12:33.07:0,33,443	0/0:35,0:35:96.25:0,96,1316	0/0:4,0:4:12.04:0,12,177	1/1:3,13:15:42.13:721,42,0	1/1:1,22:24:66.14:1066,66,0	1/1:2,8:10:16.13:402,16,0	1/1:5,15:20:57.13:902,57,0	1/1:11,14:25:55.12:1000,55,0	0/0:21,0:21:60.13:0,60,787	1/1:0,16:16:45.15:775,45,0
chr10	30969528	.	C	CAA	7064.45	PASS	AB=0.900;AC=39;AF=0.696;AN=56;BaseQRankSum=1.669;DP=489;FS=3.439;HRun=11;HaplotypeScore=103.1878;InbreedingCoeff=0.8290;MQ=62.50;MQ0=4;MQRankSum=-2.269;QD=20.30;ReadPosRankSum=-3.327;VQSLOD=3.6210;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,6:15:32.50:344,32,0	1/1:1,2:6:14.49:144,14,0	0/0:7,0:3:2.49:0,2,9	0/0:11,0:8:2.04:0,2,15	1/1:12,7:21:9.50:405,9,0	1/1:12,11:24:33.09:444,33,0	1/1:3,5:9:20.55:251,21,0	1/1:17,7:25:35.47:357,35,0	0/0:17,0:18:38.72:0,39,361	1/1:5,0:21:41.12:175,41,0	1/1:3,0:16:23.40:99,23,0	1/1:16,7:24:53.60:627,54,0	1/1:10,3:15:29.39:293,29,0	1/1:2,8:10:15.05:217,15,0	0/0:25,0:28:47.93:0,48,515	1/1:6,19:26:59.66:797,60,0	1/1:12,3:15:30.01:325,30,0	1/1:9,1:11:14.93:134,15,0	0/0:2,0:14:31.32:0,31,145	0/0:11,0:32:57.52:0,58,249	0/0:2,0:7:13.71:0,14,59	1/1:6,8:14:27.05:367,27,0	1/1:13,9:25:50.46:568,50,0	1/1:5,5:10:12.03:155,12,0	1/1:9,12:22:15.99:523,16,0	1/1:11,18:30:59.84:725,60,0	0/0:4,0:21:43.88:0,44,190	0/1:8,1:9:10.91:116,0,11
chr10	30969760	.	C	CAAAAGAAAAGAAAAG	4745.18	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=-3.753;DP=618;FS=24.243;HRun=0;HaplotypeScore=265.7210;InbreedingCoeff=0.6424;MQ=65.05;MQ0=10;MQRankSum=-1.536;QD=37.66;ReadPosRankSum=-6.879;VQSLOD=1.6088;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:37:24.01:0,24,674	0/0:7,0:7:9.03:0,9,301	1/1:45,0:19:6.90:81,7,0	0/0:58,0:26:1.54:0,2,28	0/0:22,0:22:6.02:0,6,209	0/0:18,0:18:25.90:0,26,842	0/0:16,0:16:13.86:0,14,297	0/0:25,0:25:10.27:0,10,105	0/0:18,0:18:24.08:0,24,892	1/1:26,4:32:39.13:2244,39,0	1/1:26,3:31:48.12:2228,48,0	0/0:20,0:20:26.58:0,27,845	0/0:10,0:10:12.04:0,12,387	0/0:17,0:17:22.63:0,23,679	0/0:28,0:28:42.14:0,42,1657	0/0:14,0:14:14.89:0,15,523	0/0:16,0:16:18.06:0,18,627	0/0:19,0:19:12.04:0,12,419	0/0:17,0:16:17.15:0,17,643	0/0:26,0:26:42.08:0,42,1464	0/0:11,0:11:12.04:0,12,463	0/0:12,0:11:9.03:0,9,312	0/0:20,0:20:14.55:0,15,336	0/0:25,0:25:16.35:0,16,456	0/0:19,0:19:16.61:0,17,527	0/1:17,0:17:99:192,0,437	0/0:27,0:27:36.11:0,36,1244	0/0:9,0:9:16.30:0,16,593
chr10	30969767	.	AAAGAAAAGAAAAG	A	14310.02	PASS	AB=0.531;AC=35;AF=0.625;AN=56;BaseQRankSum=11.029;DP=628;FS=4.744;HRun=0;HaplotypeScore=190.1736;InbreedingCoeff=0.9045;MQ=63.24;MQ0=15;MQRankSum=-6.511;QD=45.00;ReadPosRankSum=2.310;VQSLOD=3.9648;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,35:36:33.11:1101,33,0	1/1:0,7:7:15.05:460,15,0	0/0:52,0:18:41.73:0,42,632	0/0:60,0:25:53.12:0,53,1349	1/1:1,20:21:47.98:797,48,0	1/1:0,18:18:27.09:1086,27,0	1/1:0,15:15:15.05:602,15,0	1/1:1,27:28:75.01:1276,75,0	0/0:22,0:22:63.20:0,63,2665	0/0:29,0:29:87.28:0,87,3880	0/0:31,0:31:84.27:0,84,4073	1/1:0,20:20:26.97:1087,27,0	1/1:1,9:10:12.04:484,12,0	1/1:0,19:19:24.08:964,24,0	0/0:27,0:27:72.23:0,72,3417	1/1:0,13:13:15.02:604,15,0	1/1:0,16:16:18.06:725,18,0	1/1:3,20:23:18.06:582,18,0	0/0:23,0:20:58.66:0,59,2487	0/0:28,0:28:81.26:0,81,3978	0/0:11,0:11:30.10:0,30,1376	1/1:1,10:10:21.02:527,21,0	1/1:5,14:19:20.85:763,21,0	1/1:2,20:22:21.03:837,21,0	1/1:0,16:16:18.06:723,18,0	0/1:2,15:17:99:1089,0,213	0/0:27,0:27:72.24:0,72,3402	1/1:1,5:6:15.05:602,15,0
chr10	30970290	.	TC	T	692.73	PASS	AB=0.800;AC=21;AF=0.553;AN=38;BaseQRankSum=4.032;DP=161;FS=33.170;HRun=5;HaplotypeScore=15.8464;InbreedingCoeff=0.5857;MQ=34.00;MQ0=35;MQRankSum=-4.183;QD=12.60;ReadPosRankSum=-2.326;VQSLOD=-0.1289;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	1/1:1,3:3:6.02:68,6,0	./.	./.	1/1:2,3:4:3.01:34,3,0	1/1:1,2:3:6.02:68,6,0	1/1:0,4:3:3.01:34,3,0	1/1:2,12:14:27.07:305,27,0	0/0:5,0:1:3.01:0,3,41	0/0:7,0:6:18.06:0,18,242	0/0:7,0:5:12.04:0,12,164	1/1:4,3:3:3.01:34,3,0	1/1:1,3:4:6.02:68,6,0	./.	0/0:10,0:8:12.04:0,12,164	./.	./.	1/1:0,4:4:12.03:134,12,0	0/0:5,0:3:9.02:0,9,107	0/0:10,0:8:21.07:0,21,286	0/0:18,0:12:21.07:0,21,287	./.	1/1:1,2:3:3.01:34,3,0	./.	1/1:0,3:3:3.01:34,3,0	0/1:3,1:4:27.99:28,0,35	0/0:9,0:7:18.06:0,18,238	./.
chr10	30972326	.	CT	C	8031.47	PASS	AB=0.678;AC=39;AF=0.696;AN=56;BaseQRankSum=2.356;DP=588;FS=1.360;HRun=11;HaplotypeScore=64.6780;InbreedingCoeff=0.7506;MQ=64.43;MQ0=4;MQRankSum=1.104;QD=17.50;ReadPosRankSum=2.418;VQSLOD=5.9425;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,40:50:53.90:787,54,0	1/1:2,8:10:23.97:197,24,0	0/1:17,1:7:17.31:17,0,28	0/0:15,0:9:1.02:0,1,43	1/1:5,25:30:59.13:552,59,0	1/1:1,13:14:29.97:246,30,0	1/1:6,21:26:56.82:468,57,0	1/1:9,31:41:65.19:718,65,0	0/0:13,0:13:30.08:0,30,320	1/1:4,32:36:95.86:786,96,0	1/1:4,17:21:44.94:369,45,0	1/1:1,15:16:35.96:296,36,0	0/1:2,11:13:2.02:192,0,2	1/1:5,13:18:29.95:246,30,0	0/0:18,1:19:20.13:0,20,415	1/1:4,12:16:38.88:313,39,0	1/1:2,22:24:62.92:517,63,0	0/1:2,10:12:4.99:166,0,5	0/0:24,0:24:57.13:0,57,601	0/0:16,0:17:41.94:0,42,429	0/0:14,0:14:33.08:0,33,352	1/1:2,18:20:44.91:369,45,0	1/1:4,8:11:23.97:197,24,0	1/1:4,23:27:71.91:591,72,0	1/1:1,17:18:41.95:345,42,0	1/1:1,23:24:65.87:536,66,0	0/0:24,1:25:44.38:0,44,654	1/1:4,8:12:14.97:123,15,0
chr10	30973491	.	A	AGG	694.28	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-5.056;DP=452;FS=10.310;HRun=9;HaplotypeScore=111.8440;InbreedingCoeff=0.9111;MQ=72.97;MQ0=2;MQRankSum=0.674;QD=14.17;ReadPosRankSum=-2.624;VQSLOD=0.4785;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:97.71:0,98,1001	0/0:8,0:8:17.98:0,18,179	0/0:20,0:13:19.98:0,20,155	0/0:21,0:13:14.15:0,14,119	0/0:28,0:28:71.91:0,72,696	0/0:17,0:17:48.10:0,48,498	0/0:15,0:15:26.98:0,27,270	0/0:16,0:15:27.06:0,27,285	0/0:17,0:17:42.06:0,42,422	0/0:14,0:14:36.07:0,36,368	0/0:14,0:14:39.04:0,39,403	0/0:12,0:12:30.04:0,30,310	0/0:10,0:10:24.06:0,24,252	0/0:7,0:7:12.03:0,12,128	0/0:14,0:14:39.10:0,39,415	0/0:8,0:8:21.04:0,21,223	0/0:33,0:33:87.20:0,87,925	0/0:20,0:20:57.10:0,57,593	1/1:5,6:11:17.48:189,17,0	1/1:3,6:10:11.85:149,12,0	1/1:3,5:8:5.51:55,6,0	0/0:5,0:5:11.96:0,12,113	0/0:12,0:12:33.05:0,33,337	0/0:18,0:18:45.03:0,45,466	0/0:25,0:25:51.97:0,52,527	0/0:21,0:21:42.08:0,42,434	1/1:1,13:18:37.07:450,37,0	0/0:5,0:5:8.98:0,9,82
chr10	30973875	.	G	GA	3818	PASS	AB=0.685;AC=30;AF=0.536;AN=56;BaseQRankSum=-7.096;DP=554;FS=0.418;HRun=13;HaplotypeScore=84.7058;InbreedingCoeff=0.2724;MQ=73.87;MQ0=3;MQRankSum=-0.103;QD=10.32;ReadPosRankSum=-0.605;VQSLOD=3.0342;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,17:27:1.77:295,2,0	1/1:4,10:14:26.98:240,27,0	0/0:39,0:22:15.81:0,16,95	0/1:36,1:23:11:11,0,37	1/1:8,21:30:14.98:437,15,0	0/1:5,9:14:5.56:97,0,6	0/1:6,13:19:11.13:193,0,11	1/1:14,14:28:0.84:283,1,0	0/0:17,0:18:40.62:0,41,273	0/0:6,0:21:26.51:0,27,77	0/0:2,0:12:23.34:0,23,79	0/1:4,12:17:25.87:201,0,26	1/1:3,11:15:14.18:161,14,0	1/1:4,16:21:27.31:384,27,0	0/0:21,0:24:53.63:0,54,344	0/1:5,10:15:17.39:143,0,17	1/1:2,9:11:21.02:195,21,0	0/1:2,6:8:3.22:96,0,3	0/1:12,1:15:2.97:3,0,110	0/0:10,0:13:20.88:0,21,120	0/0:13,0:15:30.77:0,31,196	0/1:6,6:12:2.61:113,0,3	1/1:9,10:20:0.13:134,0,0	1/1:5,16:21:24.71:370,25,0	1/1:2,9:11:6.45:202,6,0	0/1:13,8:21:13.67:168,0,14	0/0:35,4:40:44.85:0,45,447	0/1:3,9:14:13.24:92,0,13
chr10	30974349	.	AACTTAAG	A	17795.55	PASS	AB=0.513;AC=35;AF=0.625;AN=56;BaseQRankSum=15.702;DP=568;FS=3.356;HRun=0;HaplotypeScore=150.9072;InbreedingCoeff=0.9207;MQ=78.67;MQ0=1;MQRankSum=-17.676;QD=53.60;ReadPosRankSum=0.784;VQSLOD=5.0070;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,24:25:63.09:1514,63,0	1/1:2,7:9:18.06:485,18,0	0/0:20,0:20:45.06:0,45,2063	0/0:19,0:19:50.91:0,51,1906	1/1:0,17:17:26.82:361,27,0	1/1:0,14:14:36.12:928,36,0	1/1:5,22:27:54.06:1272,54,0	1/1:4,16:20:48.14:1120,48,0	0/0:15,0:15:45.13:0,45,1678	0/0:26,0:26:75.25:0,75,2953	0/0:17,0:17:51.18:0,51,2061	1/1:2,13:14:27.09:727,27,0	1/1:3,14:17:41.98:1131,42,0	1/1:3,23:26:63.22:1696,63,0	0/0:18,0:18:54.19:0,54,2175	0/1:1,19:20:74.77:1163,0,75	1/1:1,18:19:39.07:931,39,0	1/1:4,8:12:18.06:485,18,0	0/0:20,0:20:57.16:0,57,2056	0/0:23,0:23:69.24:0,69,2747	0/0:49,0:49:99:0,147,5774	1/1:0,20:20:45.02:1029,45,0	1/1:0,15:15:42.01:866,42,0	1/1:4,17:21:23.39:602,23,0	1/1:1,21:22:54.19:1454,54,0	1/1:2,18:20:54.17:1366,54,0	0/0:29,0:28:84.29:0,84,3342	1/1:0,13:13:27.05:667,27,0
chr10	30975436	.	GAAAATCAGTACA	G	5704.04	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=11.899;DP=571;FS=3.981;HRun=0;HaplotypeScore=195.7947;InbreedingCoeff=0.9947;MQ=89.81;MQ0=0;MQRankSum=-10.095;QD=79.22;ReadPosRankSum=0.932;VQSLOD=4.2663;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:96.32:0,96,5341	0/0:10,0:10:30.10:0,30,1817	0/0:23,0:23:69.23:0,69,3474	0/0:23,0:23:63.10:0,63,2786	0/0:27,0:27:81.28:0,81,4930	0/0:23,0:23:69.24:0,69,3763	0/0:17,0:17:48.15:0,48,2677	0/0:35,0:35:93.30:0,93,4814	0/0:20,0:20:60.21:0,60,3544	0/0:20,0:20:54.18:0,54,3148	0/0:14,0:14:42.14:0,42,2436	0/0:24,0:24:69.24:0,69,3831	0/0:16,0:16:48.16:0,48,2663	0/0:11,0:11:30.09:0,30,1679	0/0:24,0:24:69.23:0,69,3761	0/0:26,0:26:78.25:0,78,4357	0/0:30,0:30:90.31:0,90,5380	0/0:18,0:18:51.16:0,51,2720	1/1:1,18:19:57.08:1610,57,0	1/1:1,17:18:42.01:1389,42,0	1/1:0,11:11:15.05:564,15,0	0/0:21,0:21:57.20:0,57,3494	0/0:18,0:18:54.17:0,54,3074	0/0:15,0:15:42.13:0,42,2353	0/0:15,0:15:45.15:0,45,2484	0/0:27,0:27:81.26:0,81,4623	1/1:0,24:24:57.06:2141,57,0	0/0:8,0:8:24.07:0,24,1319
chr10	30976491	.	CT	C	1643.30	PASS	AB=0.550;AC=37;AF=0.685;AN=54;BaseQRankSum=-4.086;DP=277;FS=3.174;HRun=2;HaplotypeScore=38.7041;InbreedingCoeff=0.7879;MQ=71.40;MQ0=12;MQRankSum=3.417;QD=12.54;ReadPosRankSum=-3.969;VQSLOD=0.8851;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,0:6:5.99:48,6,0	1/1:2,0:3:8.91:63,9,0	0/0:39,0:9:23.88:0,24,229	0/0:28,0:14:9.29:0,9,184	1/1:7,0:7:14.92:116,15,0	1/1:7,1:7:20.92:167,21,0	1/1:10,0:11:26.89:216,27,0	1/1:9,0:10:26.98:236,27,0	0/0:14,0:14:38.98:0,39,339	1/1:2,0:2:3.01:30,3,0	1/1:7,0:7:16.84:106,17,0	1/1:9,0:9:16.79:123,17,0	1/1:9,0:9:20.42:136,20,0	0/1:2,8:11:0:0,0,0	0/0:13,0:13:35.93:0,36,322	1/1:7,0:7:11.88:85,12,0	1/1:6,1:7:17.88:134,18,0	1/1:1,5:5:2.96:19,3,0	0/0:16,0:16:44.68:0,45,320	0/0:16,0:16:44.52:0,45,300	0/0:5,0:5:6.88:0,7,42	1/1:2,0:3:5.98:49,6,0	1/1:2,0:2:5.99:50,6,0	1/1:6,0:6:5.99:50,6,0	1/1:2,7:9:5.62:29,6,0	1/1:7,0:7:20.97:180,21,0	0/0:11,0:13:29.06:0,29,175	./.
chr10	30977013	.	G	GA	12348.32	PASS	AB=0.630;AC=42;AF=0.750;AN=56;BaseQRankSum=-5.237;DP=612;FS=1.028;HRun=7;HaplotypeScore=69.0389;InbreedingCoeff=0.8068;MQ=56.24;MQ0=7;MQRankSum=-1.443;QD=23.17;ReadPosRankSum=0.217;VQSLOD=4.9199;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,31:32:75.23:901,75,0	1/1:0,11:10:21.06:254,21,0	0/0:5,0:4:8.97:0,9,77	0/0:3,0:2:5.60:0,6,39	1/1:11,19:29:39.12:465,39,0	1/1:5,17:22:42.13:507,42,0	1/1:7,23:29:57.11:669,57,0	1/1:4,20:23:56.75:684,57,0	0/0:16,0:15:36.05:0,36,347	0/0:25,0:25:66.10:0,66,637	0/0:14,0:14:39.06:0,39,376	1/1:10,18:28:29.45:525,29,0	0/1:5,9:11:7.91:196,0,8	1/1:1,18:18:36.11:435,36,0	0/0:16,0:16:42.05:0,42,400	1/1:3,12:14:27.08:326,27,0	1/1:5,44:47:99:1341,111,0	1/1:0,13:13:30.09:362,30,0	1/1:12,13:24:51.12:593,51,0	1/1:12,16:27:48.10:558,48,0	1/1:7,9:16:39.12:470,39,0	1/1:4,10:14:27.08:322,27,0	1/1:4,21:25:48.12:565,48,0	1/1:4,34:35:72.22:870,72,0	1/1:1,20:20:39.12:471,39,0	1/1:6,28:34:84.18:973,84,0	1/1:15,13:27:54.15:634,54,0	0/1:7,8:15:4.90:230,0,5
chr10	30977028	.	G	GA	1781.83	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-2.890;DP=637;FS=3.720;HRun=9;HaplotypeScore=106.7877;InbreedingCoeff=0.9210;MQ=62.09;MQ0=5;MQRankSum=-3.228;QD=20.96;ReadPosRankSum=0.233;VQSLOD=3.4609;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:35:98.98:0,99,858	0/0:14,0:13:33.88:0,34,287	0/0:10,0:9:26.78:0,27,213	0/0:10,0:8:4.18:0,4,98	0/0:27,0:27:65.97:0,66,568	0/0:19,0:19:53.99:0,54,469	0/0:31,0:30:65.96:0,66,568	0/0:33,0:32:66.59:0,67,609	0/0:21,0:21:53.97:0,54,468	0/0:31,0:31:86.97:0,87,753	0/0:18,0:18:38.97:0,39,338	0/0:20,0:20:47.99:0,48,416	0/0:16,0:13:32.99:0,33,287	0/0:16,0:15:35.98:0,36,312	0/0:18,0:18:41.99:0,42,365	0/0:15,0:14:32.99:0,33,285	0/0:47,0:45:99:0,111,962	0/0:14,1:15:38.98:0,39,338	1/1:6,18:24:10.91:560,11,0	1/1:1,24:24:63.17:693,63,0	1/1:3,10:13:10.05:339,10,0	0/0:16,0:16:38.97:0,39,334	0/0:24,0:24:56.98:0,57,492	0/0:39,1:38:95.94:0,96,824	0/0:21,0:21:50.99:0,51,442	0/0:32,1:32:56.82:0,57,719	1/1:5,17:22:9.71:339,10,0	0/0:19,0:19:53.99:0,54,467
chr10	30977336	.	A	ACC	1867.18	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=5.895;DP=496;FS=8.759;HRun=3;HaplotypeScore=100.9711;InbreedingCoeff=0.8287;MQ=53.07;MQ0=12;MQRankSum=-0.436;QD=16.67;ReadPosRankSum=-1.056;VQSLOD=0.0493;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:21:36.53:0,37,265	0/0:9,0:9:24.25:0,24,173	0/0:20,0:4:9.02:0,9,92	0/1:31,0:8:1.64:2,0,61	0/0:9,0:9:8.81:0,9,75	0/0:30,0:30:43.79:0,44,485	0/0:22,0:22:30.96:0,31,331	0/0:28,0:27:65.38:0,65,571	0/0:22,0:22:44.09:0,44,490	0/0:22,0:21:8.73:0,9,252	0/0:9,0:9:10.91:0,11,93	0/0:19,0:19:9.13:0,9,166	0/0:18,0:18:23.69:0,24,177	0/0:8,0:8:11.92:0,12,94	0/0:11,0:11:26.91:0,27,295	0/0:22,0:21:20.60:0,21,211	0/0:19,0:18:38.05:0,38,305	0/0:4,0:4:10.19:0,10,73	1/1:15,3:17:36.23:434,36,0	1/1:13,1:13:29.97:318,30,0	1/1:18,3:20:39.03:529,39,0	0/0:8,0:8:20.82:0,21,163	0/0:12,0:11:17.52:0,18,132	0/0:13,0:12:23.01:0,23,181	0/0:15,0:15:20.41:0,20,158	0/0:26,0:25:68.61:0,69,595	1/1:24,3:28:63.95:744,64,0	0/0:16,0:16:41.35:0,41,346
chr10	30977337	.	CCT	C	889.34	PASS	AB=0.909;AC=27;AF=0.519;AN=52;BaseQRankSum=-3.375;DP=557;FS=23.141;HRun=0;HaplotypeScore=121.6993;InbreedingCoeff=0.3185;MQ=50.81;MQ0=13;MQRankSum=-1.071;QD=2.78;ReadPosRankSum=3.009;VQSLOD=1.0209;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:24,1:24:10.08:68,10,0	0/1:11,0:11:3.57:64,0,4	./.	./.	1/1:12,0:12:2.68:28,3,0	0/1:35,0:35:17.58:64,0,18	0/1:26,1:27:40.46:86,0,40	0/0:30,0:28:0.47:0,0,2	0/0:22,0:22:19.29:0,19,294	0/0:27,0:26:12.52:0,13,296	0/0:7,0:10:6.87:0,7,52	1/1:24,0:24:14.74:115,15,0	1/1:15,5:20:0.99:3,1,0	1/1:9,0:9:2.41:47,2,0	0/0:12,0:12:18.06:0,18,262	0/1:13,10:22:15.69:22,0,16	1/1:20,0:19:17.62:119,18,0	1/1:3,1:4:7.83:68,8,0	0/0:18,0:17:11.79:0,12,84	0/0:14,0:13:4.68:0,5,29	0/0:23,0:22:20.90:0,21,159	0/1:11,1:12:0:0,0,0	1/1:14,1:14:5.62:34,6,0	1/1:14,1:14:12.03:131,12,0	1/1:20,0:20:2.73:19,3,0	0/1:23,9:30:99:132,0,117	0/0:30,0:29:28.66:0,29,212	0/1:16,0:16:40.42:53,0,40
chr10	30977402	.	C	CTCTCTCTCTT	7820.29	PASS	AB=0.999;AC=40;AF=0.714;AN=56;BaseQRankSum=8.738;DP=619;FS=98.735;HRun=0;HaplotypeScore=211.7039;InbreedingCoeff=0.1691;MQ=62.91;MQ0=17;MQRankSum=-8.291;QD=14.01;ReadPosRankSum=-3.708;VQSLOD=-0.7627;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:9,12:29:20.40:357,20,0	1/1:8,0:7:3.48:96,3,0	0/1:64,0:13:17.20:17,0,117	0/1:105,0:43:0.99:1,0,598	1/1:13,0:13:25.81:255,26,0	0/1:20,0:20:10.21:600,0,10	0/1:23,0:23:31.83:475,0,32	0/1:26,0:26:36.69:457,0,37	0/0:22,0:22:52.42:0,52,1420	0/1:22,0:21:58.80:59,0,1286	0/0:19,0:19:27.35:0,27,923	1/1:10,7:23:17.02:397,17,0	1/1:12,0:12:22.78:363,23,0	1/1:16,1:17:36.92:787,37,0	0/0:20,0:20:54.16:0,54,1451	1/1:17,0:17:29.54:589,30,0	1/1:13,0:13:4.42:255,4,0	1/1:2,4:6:6.02:199,6,0	0/1:19,0:17:18.52:152,0,19	0/1:21,0:21:0:80,0,0	0/1:15,0:15:10.43:10,0,15	1/1:10,0:10:24.26:353,24,0	1/1:13,0:13:25.64:299,26,0	1/1:17,0:17:15.44:176,15,0	1/1:15,0:15:29.79:607,30,0	0/1:23,0:22:35.12:869,0,35	1/1:19,0:19:11.98:121,12,0	1/1:7,0:6:12.04:247,12,0
chr10	30977403	.	T	TCTCTCG	1632.25	PASS	AB=1.000;AC=18;AF=0.321;AN=56;BaseQRankSum=1.130;DP=614;FS=7.325;HRun=0;HaplotypeScore=206.6402;InbreedingCoeff=0.2100;MQ=63.86;MQ0=16;MQRankSum=-2.745;QD=6.16;ReadPosRankSum=-1.424;VQSLOD=1.7375;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:3.22:0,3,17	0/0:8,0:7:1.25:0,1,3	0/1:66,0:15:1.85:2,0,108	0/0:102,0:43:17.63:0,18,551	1/1:13,0:13:0.52:2,1,0	0/0:19,0:19:9.92:0,10,91	0/1:23,0:23:8.34:83,0,8	0/1:25,0:25:32.06:130,0,32	0/0:22,0:22:54.16:0,54,1082	0/0:21,0:20:48.16:0,48,1017	0/0:19,0:19:38.97:0,39,763	0/0:21,0:21:3.95:0,4,27	0/1:12,0:12:6.39:6,0,26	0/1:17,0:17:26.43:29,0,26	0/0:20,0:20:51.13:0,51,981	0/0:17,0:17:9.90:0,10,57	0/1:13,0:13:9.84:10,0,45	0/1:6,0:6:15.14:23,0,15	1/1:9,11:18:40.94:883,41,0	1/1:2,19:21:9.02:171,9,0	1/1:14,1:15:2.83:81,3,0	0/0:10,0:10:1.18:0,1,29	0/1:13,0:13:2.92:4,0,3	0/0:17,0:17:0.46:0,0,12	0/0:15,0:15:17.08:0,17,74	0/0:23,0:22:12.60:0,13,166	1/1:5,15:21:12.51:363,13,0	0/0:7,0:6:4.02:0,4,25
chr10	30977409	.	GCT	G	1451.01	PASS	AB=0.806;AC=22;AF=0.393;AN=56;BaseQRankSum=7.112;DP=606;FS=50.466;HRun=0;HaplotypeScore=178.9705;InbreedingCoeff=-0.3716;MQ=66.83;MQ0=15;MQRankSum=-6.819;QD=3.84;ReadPosRankSum=5.303;VQSLOD=0.8691;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:21,5:26:10.47:37,0,10	0/1:6,3:8:19.58:20,0,51	0/1:65,0:21:10.43:10,0,277	0/0:95,0:43:35.57:0,36,664	0/1:9,6:15:11.16:11,0,130	0/1:13,7:20:99:112,0,129	0/1:17,4:21:39.59:162,0,40	0/1:17,8:25:99:241,0,291	0/0:22,0:22:57.10:0,57,913	0/0:19,0:18:51.17:0,51,876	0/0:21,0:21:47.42:0,47,692	0/1:14,7:21:63.32:63,0,84	0/1:9,3:12:22.47:22,0,75	0/1:11,6:17:34.32:106,0,34	0/0:20,0:20:54.16:0,54,896	0/1:14,4:18:83.38:83,0,183	0/1:9,5:14:8.14:69,0,8	1/1:4,1:5:5.85:45,6,0	0/1:18,0:17:99:129,0,172	0/1:20,0:20:19.54:20,0,57	0/0:10,1:11:5.46:0,5,21	0/1:8,4:12:37.41:37,0,59	1/1:9,5:14:4.82:32,5,0	0/0:15,3:18:15.14:0,15,137	0/1:8,8:16:99:119,0,113	0/1:12,9:20:99:283,0,119	0/0:22,0:22:17.64:0,18,171	0/1:8,1:8:11.57:12,0,87
chr10	30977548	.	CGAATGAATGAATGAATGAAT	C	7913.03	PASS	AB=0.690;AC=31;AF=0.596;AN=52;BaseQRankSum=3.954;DP=417;FS=9.589;HRun=0;HaplotypeScore=211.8879;InbreedingCoeff=0.7379;MQ=65.17;MQ0=1;MQRankSum=-3.452;QD=35.81;ReadPosRankSum=1.322;VQSLOD=2.9582;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:7,8:15:9.03:316,9,0	1/1:2,4:6:3.01:161,3,0	0/0:10,0:8:6.02:0,6,265	0/0:12,0:10:3:0,3,26	1/1:6,11:17:15.05:741,15,0	1/1:5,7:12:12.04:644,12,0	1/1:6,6:12:6.02:322,6,0	1/1:21,14:35:39.12:680,39,0	0/0:18,0:18:51.18:0,51,4207	0/0:12,0:21:26.74:0,27,436	0/0:5,0:16:32.98:0,33,474	1/1:7,0:7:3.01:47,3,0	1/1:2,4:6:3.01:161,3,0	./.	0/0:24,0:25:69.24:0,69,5901	1/1:9,3:12:3.01:161,3,0	1/1:3,11:14:9.03:469,9,0	./.	0/0:14,0:14:9.03:0,9,316	0/0:8,0:24:57.20:0,57,1958	0/0:17,0:27:21:0,21,622	1/1:2,5:7:12.04:644,12,0	1/1:7,13:20:15.05:722,15,0	0/1:11,9:20:0.55:150,0,1	1/1:3,13:16:24.08:1217,24,0	1/1:8,10:18:27.09:1157,27,0	0/0:15,0:19:33.10:0,33,1103	1/1:2,2:4:6.02:322,6,0
chr10	30977718	.	GCAACATTA	G	12181.03	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=9.795;DP=341;FS=16.090;HRun=0;HaplotypeScore=99.9962;InbreedingCoeff=0.8824;MQ=96.28;MQ0=0;MQRankSum=-11.252;QD=52.28;ReadPosRankSum=-0.190;VQSLOD=3.4268;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,16:17:30.10:813,30,0	1/1:1,4:5:9.03:218,9,0	0/0:18,0:18:48.16:0,48,1978	0/0:22,0:22:51.17:0,51,1728	1/1:1,11:12:18.06:488,18,0	1/1:2,16:18:36.12:976,36,0	1/1:3,10:13:21.07:543,21,0	1/1:8,27:35:81.25:1897,81,0	0/0:16,0:16:48.16:0,48,2015	0/0:18,0:18:54.19:0,54,2292	0/0:10,0:10:18.06:0,18,764	1/1:0,2:2:6.02:163,6,0	1/1:0,5:5:15.05:407,15,0	1/1:1,4:5:12.04:325,12,0	0/0:24,0:24:69.24:0,69,2916	1/1:1,7:8:21.07:569,21,0	1/1:4,11:15:24.08:651,24,0	1/1:0,4:4:9.03:244,9,0	1/1:1,5:6:15.05:373,15,0	1/1:0,12:12:33.11:895,33,0	1/1:3,9:12:18.06:462,18,0	1/1:1,2:3:6.02:163,6,0	1/1:4,6:10:15.05:407,15,0	1/1:2,7:9:8.17:242,8,0	1/1:1,13:14:36.12:976,36,0	1/1:4,8:12:21.07:569,21,0	1/1:2,10:12:24.08:640,24,0	1/1:1,2:3:6.02:163,6,0
chr10	30977793	.	AC	A	5528.41	PASS	AB=0.958;AC=52;AF=0.929;AN=56;BaseQRankSum=1.019;DP=504;FS=2.933;HRun=1;HaplotypeScore=60.7533;InbreedingCoeff=0.1417;MQ=40.05;MQ0=77;MQRankSum=0.928;QD=10.97;ReadPosRankSum=-1.706;VQSLOD=2.3812;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:23:49.24:382,49,0	1/1:8,0:7:17.86:141,18,0	0/1:63,7:9:6.08:10,0,6	0/1:56,5:10:7.89:8,0,56	1/1:17,0:16:38.37:257,38,0	1/1:19,0:18:43.15:312,43,0	1/1:13,0:13:33.30:260,33,0	1/1:16,0:15:35.87:293,36,0	0/1:11,0:8:5.20:5,0,46	1/1:21,0:18:52.29:408,52,0	1/1:22,0:21:58.81:436,59,0	1/1:7,0:5:14.68:99,15,0	1/1:10,0:7:20.83:151,21,0	1/1:10,0:9:23.68:159,24,0	0/1:21,0:20:99:110,0,99	1/1:8,0:7:20.10:140,20,0	1/1:21,0:16:41.33:284,41,0	1/1:9,0:8:19.96:144,20,0	1/1:13,16:23:55.52:432,56,0	1/1:22,0:18:49.96:357,50,0	1/1:10,0:8:20.83:157,21,0	1/1:5,0:4:8.94:72,9,0	1/1:4,0:3:4.36:31,4,0	1/1:5,0:2:1.55:4,2,0	1/1:18,0:17:44.58:321,45,0	1/1:18,0:14:41.16:289,41,0	1/1:10,0:8:20.84:159,21,0	1/1:14,0:5:14.89:107,15,0
chr10	30979737	.	C	CCCTCCTT	26782.25	PASS	AB=1.000;AC=41;AF=0.732;AN=56;BaseQRankSum=-9.088;DP=759;FS=4.813;HRun=0;HaplotypeScore=142.8631;InbreedingCoeff=0.8806;MQ=54.82;MQ0=3;MQRankSum=-11.477;QD=48.78;ReadPosRankSum=-0.583;VQSLOD=4.4111;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,21:30:45.15:1534,45,0	1/1:1,13:14:30.10:1137,30,0	0/1:33,0:24:10.12:10,0,464	0/0:28,0:19:20.58:0,21,572	1/1:5,23:30:60.11:1717,60,0	1/1:3,13:18:18.06:672,18,0	1/1:6,23:30:27.09:1024,27,0	1/1:33,0:33:57.15:1270,57,0	0/0:30,0:30:81.24:0,81,1832	1/1:1,32:35:84.27:2587,84,0	1/1:3,24:29:53.94:1487,54,0	1/1:2,20:23:39.13:1479,39,0	1/1:6,14:22:30.10:1137,30,0	1/1:6,23:31:51.17:1925,51,0	0/0:37,0:37:99:0,99,2182	1/1:7,20:29:36.02:1356,36,0	1/1:6,13:20:15.05:557,15,0	1/1:4,12:18:15.05:570,15,0	0/0:15,0:15:33.09:0,33,658	0/0:34,0:34:78.18:0,78,1557	0/0:35,0:35:84.24:0,84,1751	1/1:8,25:35:54.07:1684,54,0	1/1:5,17:24:37.19:1323,37,0	1/1:4,10:17:3.01:114,3,0	1/1:2,26:28:57.20:2162,57,0	1/1:5,24:31:78.22:2127,78,0	0/0:31,0:30:78.23:0,78,1661	1/1:5,11:19:24.08:912,24,0
chr10	30979751	.	T	TCC	4636.59	PASS	AB=0.985;AC=21;AF=0.375;AN=56;BaseQRankSum=18.136;DP=704;FS=2.184;HRun=0;HaplotypeScore=154.6386;InbreedingCoeff=-0.3024;MQ=57.59;MQ0=2;MQRankSum=-16.572;QD=10.33;ReadPosRankSum=6.281;VQSLOD=4.6701;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:24:99:199,0,241	0/1:14,0:14:57.27:177,0,57	0/0:23,0:16:45.15:0,45,696	0/0:29,0:22:44.02:0,44,672	0/1:28,0:28:99:284,0,335	0/1:16,0:16:92.01:92,0,120	0/1:24,0:24:65.02:171,0,65	0/1:21,7:28:99:306,0,498	0/0:30,0:30:90.29:0,90,1442	0/1:33,0:33:99:540,0,203	0/1:27,0:27:99:296,0,372	0/1:24,0:24:99:221,0,190	0/1:18,1:19:99:191,0,104	0/1:29,0:29:86.75:306,0,87	0/0:41,0:41:99:0,120,1863	0/1:30,0:30:99:210,0,310	0/1:20,0:20:58.08:58,0,352	0/1:17,0:17:79.26:79,0,214	0/0:17,0:17:48.16:0,48,760	0/0:31,0:31:93.28:0,93,1447	0/0:32,0:32:96.30:0,96,1509	0/1:33,0:33:99:362,0,411	0/1:21,0:21:99:275,0,103	0/0:22,0:22:8.25:0,8,408	1/1:25,0:25:56.52:405,57,0	0/1:25,0:25:99:288,0,267	0/0:30,0:29:90.31:0,90,1466	1/1:12,0:12:23.86:175,24,0
chr10	30981479	.	AT	A	8338.10	PASS	AB=0.883;AC=38;AF=0.679;AN=56;BaseQRankSum=9.111;DP=605;FS=1.910;HRun=10;HaplotypeScore=62.6506;InbreedingCoeff=0.8381;MQ=74.83;MQ0=0;MQRankSum=-2.301;QD=20.49;ReadPosRankSum=3.559;VQSLOD=5.8249;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,28:31:77.98:677,78,0	1/1:1,8:9:20.99:182,21,0	0/1:8,1:10:20.16:20,0,84	0/1:13,1:14:16.59:17,0,221	1/1:5,40:46:99:1048,122,0	1/1:3,26:29:71.98:625,72,0	1/1:4,13:17:35.99:312,36,0	1/1:7,22:29:65.98:573,66,0	0/0:18,0:18:45.12:0,45,498	0/0:29,0:30:72.03:0,72,778	0/0:19,0:19:51.14:0,51,564	1/1:3,21:24:35.62:471,36,0	1/1:2,18:20:47.99:417,48,0	1/1:3,17:20:47.98:417,48,0	0/0:31,0:31:84.19:0,84,916	1/1:1,18:19:53.99:469,54,0	1/1:0,15:15:38.99:339,39,0	1/1:1,11:14:37.07:298,37,0	0/0:14,0:15:41.93:0,42,431	0/0:31,1:32:52.15:0,52,796	0/0:15,0:15:39.11:0,39,431	1/1:1,18:19:50.99:443,51,0	1/1:1,21:22:59.98:521,60,0	1/1:3,17:20:47.99:417,48,0	1/1:3,11:14:29.97:260,30,0	1/1:1,22:23:65.98:573,66,0	0/0:37,1:38:79.23:0,79,1102	1/1:2,10:12:29.98:260,30,0
chr10	30982174	.	GCT	G	11971.34	PASS	AB=0.889;AC=41;AF=0.732;AN=56;BaseQRankSum=9.099;DP=589;FS=2.716;HRun=0;HaplotypeScore=78.8885;InbreedingCoeff=0.9056;MQ=76.71;MQ0=1;MQRankSum=-2.425;QD=29.13;ReadPosRankSum=3.447;VQSLOD=6.4584;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,25:29:75.24:930,75,0	1/1:2,10:12:27.08:335,27,0	0/0:26,0:21:39.12:0,39,559	0/0:29,0:27:16.95:0,17,523	1/1:4,25:29:72.23:893,72,0	1/1:4,27:31:69.22:856,69,0	1/1:3,11:14:30.09:372,30,0	1/1:11,18:29:54.14:652,54,0	0/1:7,1:8:22.15:22,0,182	1/1:1,22:23:66.19:802,66,0	1/1:3,17:20:51.12:615,51,0	1/1:0,8:8:18.06:223,18,0	1/1:1,20:21:60.19:741,60,0	1/1:1,15:16:36.11:446,36,0	0/0:23,1:24:29.01:0,29,953	1/1:4,17:20:45.14:558,45,0	1/1:6,28:33:75.24:930,75,0	1/1:2,15:17:45.14:558,45,0	0/0:21,0:22:31:0,31,670	0/0:28,0:28:69.22:0,69,1096	0/0:19,0:19:28.41:0,28,765	1/1:4,11:15:33.10:409,33,0	1/1:2,14:16:39.12:484,39,0	1/1:0,15:15:42.13:521,42,0	1/1:4,16:20:42.13:521,42,0	1/1:3,17:20:51.15:620,51,0	0/0:29,0:29:75.24:0,75,1202	1/1:0,13:13:39.12:484,39,0
chr10	30985550	.	GC	G	3772.28	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=12.457;DP=631;FS=0.426;HRun=1;HaplotypeScore=83.2168;InbreedingCoeff=0.9988;MQ=62.43;MQ0=1;MQRankSum=-1.150;QD=39.29;ReadPosRankSum=1.785;VQSLOD=4.2338;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:90.31:0,90,1435	0/0:14,0:14:42.14:0,42,671	0/0:22,0:21:60.07:0,60,900	0/0:14,0:14:42.14:0,42,672	0/0:34,0:34:99:0,102,1604	0/0:18,0:18:54.18:0,54,860	0/0:26,0:26:78.27:0,78,1239	0/0:32,0:32:96.32:0,96,1513	0/0:23,0:23:69.21:0,69,1078	0/0:29,0:29:87.15:0,87,1329	0/0:27,0:27:81.28:0,81,1288	0/0:15,0:15:42.13:0,42,648	0/0:21,0:21:63.21:0,63,1007	0/0:16,0:16:45.15:0,45,709	0/0:32,0:32:96.33:0,96,1535	0/0:21,0:21:63.21:0,63,1007	0/0:28,0:28:81.26:0,81,1269	0/0:23,0:23:66.23:0,66,1055	1/1:0,14:14:39.13:545,39,0	1/1:0,22:22:60.20:836,60,0	1/1:0,26:26:75.25:1049,75,0	0/0:16,0:16:48.16:0,48,767	0/0:18,0:18:51.17:0,51,815	0/0:29,0:29:84.29:0,84,1343	0/0:16,0:16:48.15:0,48,745	0/0:24,0:24:72.25:0,72,1151	1/1:0,34:34:96.32:1342,96,0	0/0:7,0:7:21.07:0,21,336
chr10	30985702	.	C	CAGGG	40803.32	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-13.273;DP=728;FS=0.000;HRun=0;HaplotypeScore=96.4412;InbreedingCoeff=0.9952;MQ=85.06;MQ0=0;MQRankSum=-7.172;QD=67.00;ReadPosRankSum=5.210;VQSLOD=7.1532;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,43:46:96.33:2734,96,0	1/1:0,13:15:33.11:924,33,0	0/0:29,0:29:78.27:0,78,1529	0/0:23,0:22:58.43:0,58,1080	1/1:0,30:31:81.27:2144,81,0	1/1:1,12:13:27.09:750,27,0	1/1:1,33:34:78.27:2209,78,0	1/1:1,19:22:60.19:1456,60,0	0/0:37,0:37:99:0,111,2273	1/1:0,35:38:99:3007,114,0	1/1:0,17:20:51.18:1441,51,0	1/1:0,25:25:63.22:1749,63,0	1/1:0,24:24:56.96:1649,57,0	1/1:0,17:17:45.15:1303,45,0	0/0:30,0:30:87.28:0,87,1744	1/1:1,38:41:99:2801,99,0	1/1:1,26:27:66.70:1913,67,0	1/1:0,18:20:45.15:1274,45,0	1/1:0,18:19:57.20:1496,57,0	1/1:0,22:25:57.20:1617,57,0	1/1:0,21:23:36.12:1043,36,0	1/1:0,18:20:45.15:1303,45,0	1/1:0,20:22:45.15:1303,45,0	1/1:0,28:29:60.21:1739,60,0	1/1:0,17:18:48.16:1391,48,0	1/1:1,36:39:99:3125,114,0	1/1:0,29:31:69.24:1997,69,0	1/1:0,7:7:15.05:435,15,0
chr10	30986939	.	A	ATT	4266.02	PASS	AB=0.653;AC=44;AF=0.786;AN=56;BaseQRankSum=7.035;DP=471;FS=4.321;HRun=10;HaplotypeScore=103.5217;InbreedingCoeff=0.5159;MQ=71.35;MQ0=2;MQRankSum=-3.642;QD=10.67;ReadPosRankSum=1.453;VQSLOD=2.8993;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,1:33:46.25:210,46,0	1/1:1,0:8:14.97:53,15,0	0/0:15,0:10:23.61:0,24,210	0/0:19,0:15:16.17:0,16,198	0/1:9,0:21:16.14:125,0,16	1/1:6,0:23:10.37:107,10,0	1/1:4,0:20:2.43:75,2,0	1/1:9,0:23:33.69:117,34,0	0/0:13,0:14:39:0,39,383	1/1:5,7:13:20.52:236,21,0	1/1:0,12:12:30.02:397,30,0	1/1:3,0:15:24.68:86,25,0	1/1:2,0:12:24.95:88,25,0	1/1:2,1:9:15.49:89,15,0	0/0:23,0:23:60.11:0,60,604	0/1:7,0:17:36.12:40,0,36	1/1:8,0:26:45.17:161,45,0	1/1:2,0:12:22.46:79,22,0	1/1:7,6:15:28.32:372,28,0	1/1:2,16:19:48.16:708,48,0	1/1:2,7:12:23.52:287,24,0	1/1:3,0:22:39.93:141,40,0	0/1:9,0:16:6.56:75,0,7	1/1:5,0:17:2.31:75,2,0	1/1:4,0:10:17.94:72,18,0	0/1:6,0:13:37.08:48,0,37	1/1:6,13:19:39.09:554,39,0	1/1:4,0:12:19.96:70,20,0
chr10	30986963	.	CCG	C	6442.46	PASS	AB=1.000;AC=49;AF=0.875;AN=56;BaseQRankSum=4.996;DP=403;FS=4.334;HRun=0;HaplotypeScore=82.8596;InbreedingCoeff=0.8044;MQ=63.84;MQ0=6;MQRankSum=-0.281;QD=18.15;ReadPosRankSum=0.052;VQSLOD=4.6866;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:20,4:22:41.84:331,42,0	1/1:3,3:6:14.98:124,15,0	0/0:21,0:12:29.87:0,30,291	0/1:24,0:15:7.63:8,0,63	1/1:11,5:16:38.95:331,39,0	1/1:13,6:19:53.96:471,54,0	1/1:12,3:15:26.86:212,27,0	1/1:10,5:15:42.02:383,42,0	0/0:13,0:13:29.71:0,30,237	1/1:9,0:10:27.83:237,28,0	1/1:12,0:14:3.83:130,4,0	1/1:11,5:15:35.99:315,36,0	1/1:4,6:10:26.97:226,27,0	1/1:5,2:7:14.74:117,15,0	0/0:14,0:14:35.81:0,36,277	1/1:13,4:17:41.81:335,42,0	1/1:19,7:26:60.22:502,60,0	1/1:6,5:11:29.88:257,30,0	1/1:12,0:14:42:378,42,0	1/1:14,0:16:32.70:263,33,0	1/1:8,0:9:14.99:126,15,0	1/1:11,3:14:35.97:305,36,0	1/1:4,3:7:18:160,18,0	1/1:15,2:16:26.84:204,27,0	1/1:5,6:11:21.01:209,21,0	1/1:13,2:15:44.94:393,45,0	1/1:10,0:12:29.81:229,30,0	1/1:5,4:9:23.95:195,24,0
chr10	30987013	.	GTGTA	G	4633.05	PASS	AB=1.000;AC=35;AF=0.625;AN=56;BaseQRankSum=-0.054;DP=406;FS=38.792;HRun=0;HaplotypeScore=75.8695;InbreedingCoeff=0.8532;MQ=65.64;MQ0=16;MQRankSum=-0.291;QD=17.03;ReadPosRankSum=3.173;VQSLOD=2.3520;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:23:53.38:414,53,0	1/1:5,0:5:11.96:93,12,0	0/0:20,0:12:36.02:0,36,353	0/0:23,0:17:50.96:0,51,463	1/1:21,1:22:55.02:424,55,0	1/1:23,1:24:68.37:570,68,0	1/1:17,1:18:41.87:343,42,0	1/1:21,0:20:16.13:295,16,0	0/0:13,0:13:11.83:0,12,216	0/0:11,0:10:26.94:0,27,295	0/0:16,0:15:17.99:0,18,191	1/1:10,3:13:32.96:301,33,0	1/1:7,0:6:13.41:99,13,0	1/1:8,1:9:19.90:164,20,0	0/0:15,0:14:35.82:0,36,298	1/1:13,2:15:38.94:335,39,0	1/1:25,0:24:9.94:207,10,0	1/1:15,0:13:7.44:166,7,0	0/0:5,0:3:8.97:0,9,73	0/0:12,0:12:16.03:0,16,189	0/0:11,0:9:11.97:0,12,96	1/1:5,0:5:8.98:73,9,0	1/1:13,2:14:41.83:358,42,0	1/1:19,0:19:44.81:367,45,0	0/1:15,0:15:34.61:119,0,35	1/1:13,1:13:25.47:229,25,0	0/0:8,0:8:9.62:0,10,136	1/1:4,0:4:11.83:78,12,0
chr10	30987307	.	G	GTC	688.86	PASS	AB=0.839;AC=13;AF=0.232;AN=56;BaseQRankSum=3.438;DP=539;FS=0.741;HRun=0;HaplotypeScore=112.7990;InbreedingCoeff=0.5855;MQ=84.99;MQ0=5;MQRankSum=-1.898;QD=4.28;ReadPosRankSum=-2.579;VQSLOD=2.4856;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:33:77.63:0,78,859	0/0:4,0:4:3.01:0,3,36	0/0:41,0:37:19.82:0,20,181	0/1:39,0:30:28.52:29,0,300	0/0:6,0:6:12.02:0,12,131	0/0:24,0:26:59.83:0,60,662	0/0:21,0:21:42.13:0,42,500	0/0:32,0:32:24.04:0,24,271	0/0:19,0:19:42.13:0,42,500	1/1:6,6:14:15.05:239,15,0	0/1:7,8:15:40.14:218,0,40	0/0:19,0:20:50.99:0,51,585	0/0:11,0:11:27.08:0,27,322	0/0:15,0:15:30.05:0,30,341	0/0:15,0:15:30.05:0,30,332	0/0:15,0:17:38.74:0,39,386	0/0:29,0:30:66.03:0,66,764	0/0:14,0:15:32.93:0,33,371	1/1:16,0:20:17.85:141,18,0	1/1:9,0:12:3:26,3,0	1/1:23,0:28:6:53,6,0	0/1:7,1:8:29.63:30,0,150	0/0:9,0:10:26.91:0,27,300	0/0:29,0:31:62.85:0,63,707	0/0:6,0:6:12.03:0,12,134	0/0:18,0:18:33.09:0,33,380	1/1:11,1:17:14.94:123,15,0	0/0:8,0:8:15.02:0,15,165
chr10	30987593	.	G	GT	853.51	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=-3.913;DP=542;FS=8.579;HRun=10;HaplotypeScore=62.4915;InbreedingCoeff=0.7681;MQ=76.72;MQ0=2;MQRankSum=-0.195;QD=16.10;ReadPosRankSum=-0.951;VQSLOD=3.3983;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:37:99:0,108,870	0/0:9,0:9:17.96:0,18,146	0/0:35,0:25:4.15:0,4,177	0/0:26,0:17:10.61:0,11,76	0/0:26,1:28:38.96:0,39,514	0/0:13,0:13:32.96:0,33,271	0/0:16,0:17:35.42:0,35,269	0/0:33,1:34:36.88:0,37,503	0/0:8,0:8:23.90:0,24,189	1/1:6,17:23:32.19:510,32,0	1/1:2,14:19:47.75:464,48,0	0/0:17,0:18:46.94:0,47,368	0/0:14,0:14:32.95:0,33,271	0/0:12,0:12:32.96:0,33,271	0/0:13,0:13:35.92:0,36,289	0/0:10,0:10:26.97:0,27,222	0/0:30,0:32:85.93:0,86,695	0/0:25,0:25:68.89:0,69,562	0/0:22,0:22:53.85:0,54,432	0/0:21,0:22:55.96:0,56,449	0/0:13,0:13:35.96:0,36,296	0/0:11,0:11:29.96:0,30,246	0/0:12,0:12:26.95:0,27,222	0/0:22,0:22:53.80:0,54,429	0/0:9,0:9:26.96:0,27,220	0/0:17,1:18:21.95:0,22,386	0/0:26,0:27:70.94:0,71,572	0/1:11,0:11:3.17:3,0,127
chr10	30990271	.	ATATT	A	393.20	PASS	AC=10;AF=0.238;AN=42;BaseQRankSum=2.352;DP=255;FS=4.667;HRun=0;HaplotypeScore=46.7421;InbreedingCoeff=0.5822;MQ=63.48;MQ0=3;MQRankSum=2.774;QD=7.02;ReadPosRankSum=-0.204;VQSLOD=1.0760;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:17.91:0,18,267	0/0:4,0:4:6.02:0,6,108	./.	./.	./.	0/0:22,0:22:39.03:0,39,695	0/0:8,0:8:3.01:0,3,70	0/0:31,0:30:12.04:0,12,261	0/0:4,0:4:6.02:0,6,141	1/1:9,0:9:6.01:56,6,0	0/0:4,0:4:0:0,0,0	0/0:6,0:6:8.96:0,9,158	0/0:4,0:4:9.02:0,9,117	0/0:2,0:2:3.01:0,3,37	./.	0/0:2,0:2:3.01:0,3,71	0/0:23,0:23:39.02:0,39,622	0/0:19,0:19:30.56:0,31,607	1/1:15,3:17:8.71:139,9,0	1/1:9,1:10:6.02:94,6,0	1/1:5,1:6:3.01:47,3,0	./.	./.	./.	0/0:10,0:10:3.01:0,3,71	0/0:7,0:7:3.01:0,3,70	1/1:6,7:13:12.04:188,12,0	0/0:14,0:14:12.04:0,12,265
chr10	30990297	.	ATTTATTTATTTATTTAGTGTGT	A	657.73	PASS	AB=0.522;AC=3;AF=0.054;AN=56;BaseQRankSum=4.023;DP=208;FS=7.946;HRun=0;HaplotypeScore=116.4506;InbreedingCoeff=0.1964;MQ=49.50;MQ0=6;MQRankSum=0.930;QD=41.11;ReadPosRankSum=-0.747;VQSLOD=1.8296;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:9:24.85:0,25,1090	0/0:2,0:2:6.02:0,6,423	0/0:2,0:1:2.96:0,3,19	0/0:1,0:1:3.01:0,3,62	0/0:3,0:3:6.01:0,6,98	0/0:20,0:20:60.19:0,60,3220	0/0:7,0:7:18.06:0,18,682	0/0:32,0:30:90.30:0,90,3504	0/0:6,0:5:13.86:0,14,777	0/1:1,10:12:58.65:574,0,59	1/1:0,4:4:6.02:177,6,0	0/0:4,0:4:10.85:0,11,593	0/0:4,0:4:12.04:0,12,635	0/0:4,0:3:7.58:0,8,324	0/0:4,0:4:12.04:0,12,463	0/0:3,0:3:9.03:0,9,456	0/0:19,0:19:55.74:0,56,3225	0/0:16,0:16:45.15:0,45,2933	0/0:13,0:10:21.96:0,22,837	0/0:4,0:4:12.04:0,12,593	0/0:2,0:2:6.02:0,6,280	0/0:3,0:3:3.01:0,3,73	0/0:1,0:1:3.01:0,3,85	0/0:1,0:1:3.01:0,3,121	0/0:10,0:9:23.27:0,23,660	0/0:3,0:3:9.03:0,9,496	0/0:11,0:11:24.08:0,24,1298	0/0:7,0:7:21.07:0,21,1133
chr10	30990301	.	A	AGTG	404.17	PASS	AB=0.814;AC=8;AF=0.160;AN=50;BaseQRankSum=5.822;DP=206;FS=2.363;HRun=0;HaplotypeScore=55.6867;InbreedingCoeff=-0.0701;MQ=45.02;MQ0=6;MQRankSum=-4.017;QD=8.79;ReadPosRankSum=0.937;VQSLOD=2.7507;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:9:24.08:0,24,408	0/0:2,0:2:6.02:0,6,112	./.	./.	./.	0/1:16,2:19:99:101,0,751	0/1:3,3:6:96.61:142,0,97	0/0:33,0:31:88.58:0,89,1544	0/0:7,0:6:18.04:0,18,286	0/0:13,0:13:14.94:0,15,177	0/0:4,0:4:3.01:0,3,55	0/0:4,0:4:12.04:0,12,206	0/1:3,1:4:49.41:49,0,155	0/0:5,0:4:0.09:0,0,84	0/0:4,0:4:12.04:0,12,224	0/1:2,2:4:46.90:112,0,47	0/0:19,0:19:23.74:0,24,888	0/0:16,0:16:20.28:0,20,709	0/0:12,0:10:27.05:0,27,348	0/0:5,0:5:15.03:0,15,208	0/0:2,0:2:6.02:0,6,86	0/0:3,0:3:3.01:0,3,39	0/0:1,0:1:2.99:0,3,24	1/1:1,0:1:3.01:48,3,0	0/1:7,1:7:66.97:67,0,167	0/1:4,0:4:8.31:8,0,103	0/0:11,0:11:24.06:0,24,337	0/0:4,0:4:12.04:0,12,223
chr10	30990312	.	TA	T	287.69	PASS	AB=0.859;AC=13;AF=0.250;AN=52;BaseQRankSum=5.764;DP=250;FS=1.962;HRun=1;HaplotypeScore=48.2460;InbreedingCoeff=0.0045;MQ=45.02;MQ0=9;MQRankSum=-1.547;QD=3.16;ReadPosRankSum=1.518;VQSLOD=-0.0355;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:10:9.03:0,9,141	0/0:3,0:3:2.80:0,3,48	0/0:17,0:3:6.02:0,6,93	0/1:11,0:5:10.53:11,0,42	./.	0/1:16,3:19:83.09:83,0,344	0/1:2,4:5:35.88:76,0,36	0/0:27,0:24:24.23:0,24,916	0/0:9,0:8:18.06:0,18,280	0/0:16,0:15:9.31:0,9,207	0/0:4,0:4:2.97:0,3,20	0/0:4,0:4:6.02:0,6,96	0/1:3,1:4:38.09:52,0,38	1/1:7,0:6:2.59:10,3,0	0/0:7,0:7:21.02:0,21,258	0/1:2,2:4:38.78:62,0,39	0/1:18,0:18:6.20:6,0,306	0/0:13,0:13:25.67:0,26,485	0/0:13,0:13:34.74:0,35,421	0/0:8,0:8:21.42:0,21,246	0/0:3,0:3:8.39:0,8,100	0/1:7,0:7:0:0,0,0	./.	1/1:0,1:2:5.95:44,6,0	0/1:6,2:7:35.84:74,0,36	0/1:5,0:5:4.91:5,0,170	0/0:16,0:15:37.04:0,37,398	0/0:5,0:5:12.04:0,12,190
chr10	30991946	.	G	GGT	1410.44	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=5.139;DP=593;FS=1.601;HRun=0;HaplotypeScore=203.6621;InbreedingCoeff=0.3359;MQ=60.47;MQ0=8;MQRankSum=-7.574;QD=6.32;ReadPosRankSum=-1.342;VQSLOD=3.0978;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:17:6.39:0,6,270	0/1:6,0:6:14.70:15,0,32	0/0:38,0:23:51.16:0,51,640	0/0:35,0:27:48.59:0,49,570	0/0:30,0:29:17.98:0,18,210	0/1:22,0:21:27.80:28,0,164	0/0:8,0:8:21.07:0,21,267	0/0:24,0:23:33.58:0,34,628	0/0:18,0:18:4.97:0,5,270	0/1:23,0:23:37.21:37,0,282	0/0:27,0:27:24.04:0,24,285	0/1:20,0:20:2.95:3,0,260	0/1:16,0:16:30.76:31,0,235	0/0:18,0:18:31.21:0,31,348	0/0:22,0:21:12.48:0,12,220	0/0:14,0:14:11.36:0,11,237	0/0:25,0:25:5.93:0,6,421	0/0:10,0:10:23.96:0,24,302	1/1:20,6:25:17.73:368,18,0	1/1:16,5:21:23.02:256,23,0	1/1:10,15:25:24.08:401,24,0	0/0:17,0:17:4.26:0,4,41	0/1:22,0:21:4.92:5,0,135	0/0:14,0:14:20.30:0,20,230	0/0:34,0:34:35.15:0,35,352	0/0:17,0:16:21.70:0,22,291	1/1:15,8:22:32.68:430,33,0	0/1:19,0:19:10.34:10,0,235
chr10	30991984	.	T	TG	364.86	PASS	AB=0.927;AC=15;AF=0.278;AN=54;BaseQRankSum=1.794;DP=531;FS=3.816;HRun=1;HaplotypeScore=131.5769;InbreedingCoeff=0.0208;MQ=30.41;MQ0=19;MQRankSum=-1.662;QD=1.40;ReadPosRankSum=2.111;VQSLOD=-0.6998;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:17,1:17:2.21:0,2,40	1/1:10,2:10:5.93:76,6,0	./.	0/0:8,0:2:6.02:0,6,77	0/0:31,4:34:5.71:0,6,63	0/0:21,3:22:8.46:0,8,136	0/1:14,0:14:0.04:1,0,0	0/0:24,0:16:37.60:0,38,407	0/0:17,0:17:4.29:0,4,61	0/1:31,1:30:14.13:14,0,665	0/0:23,0:22:0.77:0,1,2	0/1:14,2:16:11.28:11,0,86	0/0:11,1:12:3.52:0,4,41	0/1:16,2:17:2.71:3,0,73	0/1:18,0:17:2.03:2,0,47	0/0:11,0:10:2.16:0,2,6	0/1:15,2:17:31.15:31,0,101	0/0:8,0:8:5.35:0,5,57	0/1:24,6:26:99:213,0,273	1/1:29,2:31:4.66:52,5,0	0/0:14,1:14:5.23:0,5,45	0/0:12,0:11:0.28:0,0,2	0/0:16,2:17:2:0,2,5	1/1:20,0:19:0.47:1,0,0	0/1:29,2:31:16.82:17,0,81	0/0:18,0:18:22.84:0,23,241	0/1:19,2:19:71.84:72,0,210	0/0:9,0:8:12.85:0,13,188
chr10	30992156	.	G	GC	2320.29	PASS	AB=0.667;AC=36;AF=0.643;AN=56;BaseQRankSum=-3.078;DP=398;FS=17.676;HRun=10;HaplotypeScore=62.2813;InbreedingCoeff=0.0898;MQ=66.15;MQ0=2;MQRankSum=-2.454;QD=7.66;ReadPosRankSum=-1.565;VQSLOD=0.1583;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:6,6:12:13.82:14,0,19	1/1:3,5:8:8.89:96,9,0	0/0:25,0:23:24.29:0,24,184	0/0:22,0:17:15.72:0,16,180	0/1:6,1:7:22.98:23,0,40	0/1:6,13:19:6.64:130,0,7	0/0:17,0:19:39.97:0,40,307	0/1:14,10:24:13.11:219,0,13	0/0:13,0:13:20.90:0,21,169	1/1:8,0:8:5.96:45,6,0	1/1:4,2:8:11.74:86,12,0	1/1:4,13:17:0.24:175,0,0	1/1:4,3:7:3.01:32,3,0	0/1:4,9:13:12.60:84,0,13	0/0:16,0:16:35.91:0,36,295	1/1:1,0:8:5.43:28,5,0	1/1:3,15:18:5.43:263,5,0	0/1:7,13:20:25.10:168,0,25	0/1:7,3:10:34.25:81,0,34	1/1:14,3:17:18.91:179,19,0	0/1:5,6:11:28.24:139,0,28	1/1:11,2:13:14.96:138,15,0	1/1:7,1:8:0.47:1,0,0	0/1:9,16:25:16.21:255,0,16	1/1:7,7:15:24.69:218,25,0	1/1:7,4:11:3.01:32,3,0	0/1:6,11:16:15.62:55,0,16	1/1:2,5:7:3.01:32,3,0
chr10	30992583	.	C	CT	1370.75	PASS	AB=0.765;AC=14;AF=0.250;AN=56;BaseQRankSum=-4.292;DP=658;FS=3.617;HRun=13;HaplotypeScore=82.2591;InbreedingCoeff=0.6137;MQ=75.08;MQ0=2;MQRankSum=1.177;QD=6.53;ReadPosRankSum=-2.691;VQSLOD=2.2397;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:37:16.88:0,17,346	0/0:9,0:11:10.87:0,11,66	0/0:30,0:23:12.60:0,13,112	0/0:24,0:18:10.99:0,11,83	0/0:27,0:27:41.49:0,41,287	0/0:20,0:22:46.57:0,47,314	0/0:17,0:20:48.12:0,48,301	1/1:17,12:30:29.90:250,30,0	0/0:16,0:16:30.34:0,30,200	1/1:12,15:27:31.24:270,31,0	1/1:6,5:11:13.24:107,13,0	0/0:28,3:32:21.53:0,22,286	0/1:21,1:24:13.35:13,0,143	0/0:32,0:32:55.80:0,56,375	0/0:31,0:32:58.43:0,58,396	0/0:25,1:28:32.58:0,33,348	0/0:27,0:30:48.53:0,49,320	0/0:15,0:16:36.72:0,37,235	1/1:10,7:17:24:213,24,0	1/1:11,17:28:21.73:299,22,0	0/1:8,18:26:25.78:201,0,26	0/0:17,0:18:22.70:0,23,150	0/0:17,0:17:23.54:0,24,161	0/1:18,2:20:1.18:1,0,138	0/0:18,0:18:26.68:0,27,185	0/0:24,1:25:5.96:0,6,193	0/1:9,16:27:8.37:194,0,8	0/0:10,0:10:5.80:0,6,41
chr10	30993150	.	GA	G	891.16	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.700;DP=609;FS=0.601;HRun=9;HaplotypeScore=59.9279;InbreedingCoeff=0.9881;MQ=67.42;MQ0=4;MQRankSum=1.010;QD=16.81;ReadPosRankSum=-0.099;VQSLOD=3.5737;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:39:99:0,108,1209	0/0:8,0:8:24.07:0,24,278	0/0:16,0:14:39.02:0,39,387	0/0:9,0:9:27.04:0,27,278	0/0:30,0:30:77.58:0,78,866	0/0:16,0:16:42.09:0,42,472	0/0:11,0:11:33.04:0,33,357	0/0:27,0:27:60.09:0,60,633	0/0:22,0:22:63.17:0,63,717	1/1:7,27:33:74.98:675,75,0	1/1:2,17:19:17.69:336,18,0	0/0:25,0:25:72.19:0,72,820	0/0:17,0:17:45.09:0,45,498	0/0:18,0:18:51.15:0,51,590	0/0:25,0:25:69.19:0,69,782	0/0:27,0:27:72.18:0,72,807	0/0:30,0:30:87.15:0,87,949	0/0:18,0:18:45.07:0,45,484	0/0:22,0:21:57.17:0,57,653	0/0:25,0:25:63.17:0,63,712	0/0:24,0:23:54.16:0,54,625	0/0:19,0:19:45.10:0,45,489	0/0:20,0:20:60.13:0,60,655	0/0:26,0:26:75.18:0,75,837	0/0:21,0:21:23.76:0,24,502	0/0:18,1:19:17.68:0,18,457	0/0:25,0:25:69.18:0,69,780	0/0:16,0:16:45.13:0,45,520
chr10	30995033	.	AAAAATATATATATATAT	A	3724.09	PASS	AC=28;AF=0.583;AN=48;BaseQRankSum=0.806;DP=177;FS=1.133;HRun=0;HaplotypeScore=69.9078;InbreedingCoeff=0.4839;MQ=65.84;MQ0=13;MQRankSum=-2.047;QD=31.29;ReadPosRankSum=2.509;VQSLOD=1.9208;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:8,10:17:6.73:181,7,0	1/1:2,0:2:2.95:30,3,0	0/0:18,0:3:5.93:0,6,40	0/0:15,0:5:6.02:0,6,83	1/1:3,0:3:1.94:5,2,0	1/1:3,8:11:10.98:448,11,0	0/0:6,0:6:0:0,0,0	1/1:10,21:31:67.88:1290,68,0	./.	1/1:1,0:1:2.97:20,3,0	0/0:1,0:1:0:0,0,0	./.	1/1:0,2:2:6.02:273,6,0	1/1:1,1:2:2.92:136,3,0	0/0:4,0:3:3.01:0,3,50	1/1:3,0:3:2.91:30,3,0	1/1:2,8:10:2.82:25,3,0	1/1:4,8:10:8.97:384,9,0	0/0:2,0:2:6.02:0,6,102	0/0:1,0:1:3.01:0,3,33	0/0:4,0:4:12.04:0,12,228	./.	./.	1/1:0,1:1:3.01:136,3,0	1/1:0,4:4:2.95:136,3,0	0/0:4,0:4:1.55:0,2,5	0/0:2,0:2:3.01:0,3,31	1/1:9,9:17:16.11:627,16,0
chr10	30995034	.	AAAATATATATATATAT	A	3217.26	PASS	AC=28;AF=0.583;AN=48;BaseQRankSum=0.690;DP=168;FS=0.000;HRun=0;HaplotypeScore=63.5147;InbreedingCoeff=0.4905;MQ=63.70;MQ0=13;MQRankSum=-1.187;QD=28.22;ReadPosRankSum=2.197;VQSLOD=1.6817;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:17:13.79:199,14,0	1/1:2,0:2:2.64:11,3,0	0/0:18,0:2:5.56:0,6,30	0/0:14,0:4:5.85:0,6,48	0/0:2,0:2:0:0,0,0	1/1:10,0:10:11.28:372,11,0	0/0:1,5:6:0:0,0,0	1/1:29,0:29:71.68:1160,72,0	./.	1/1:1,0:1:3.01:30,3,0	0/0:1,0:1:0:0,0,0	./.	1/1:2,0:2:6.02:234,6,0	1/1:2,0:2:2.96:117,3,0	0/0:4,0:3:3:0,3,28	1/1:3,0:3:2.63:11,3,0	1/1:9,0:9:2.60:11,3,0	1/1:10,0:9:9.03:346,9,0	0/0:2,0:2:6.01:0,6,82	0/0:1,0:1:2.98:0,3,21	0/0:4,0:4:12.02:0,12,184	./.	./.	1/1:1,0:1:3.01:117,3,0	1/1:4,0:4:2.97:117,3,0	1/1:3,0:3:2.80:22,3,0	0/0:2,0:2:3:0,3,26	1/1:17,1:17:16.95:608,17,0
chr10	30996260	.	CG	C	381.89	PASS	AC=14;AF=0.875;AN=16;BaseQRankSum=-1.085;DP=32;FS=0.000;HRun=6;HaplotypeScore=8.0206;MQ=55.78;MQ0=3;MQRankSum=-1.735;QD=15.28;ReadPosRankSum=1.302;VQSLOD=0.8461;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	0/0:1,0:1:3:0,3,29	1/1:0,1:1:2.92:17,3,0	./.	1/1:2,4:4:9.02:96,9,0	./.	./.	./.	./.	./.	./.	./.	1/1:0,1:1:3.01:32,3,0	./.	1/1:2,4:5:12.03:128,12,0	1/1:1,0:1:3:28,3,0	./.	./.	1/1:1,2:1:3.01:32,3,0	./.	./.	./.	1/1:0,6:4:12.03:129,12,0	./.	./.	./.
chr10	30996835	.	CCG	C	251.73	PASS	AC=20;AF=0.769;AN=26;BaseQRankSum=-1.248;DP=35;FS=0.000;HRun=0;HaplotypeScore=19.4282;InbreedingCoeff=0.2588;MQ=56.78;MQ0=0;MQRankSum=-0.335;QD=8.39;ReadPosRankSum=-3.256;VQSLOD=1.7591;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,0:1:2.94:18,3,0	1/1:0,1:1:3:25,3,0	./.	0/0:1,0:1:3.01:0,3,44	./.	./.	1/1:8,2:10:13.32:140,13,0	1/1:1,0:1:2.96:19,3,0	1/1:1,0:1:2.94:18,3,0	./.	1/1:1,1:2:5.92:41,6,0	0/0:1,0:1:2.50:0,2,9	./.	./.	1/1:1,0:1:2.94:18,3,0	./.	1/1:3,0:3:0.18:15,0,0	1/1:3,1:4:5.06:21,5,0	./.	./.	1/1:6,0:6:5.58:26,6,0	./.	./.	0/0:1,0:1:0:0,0,0	./.	./.	./.	./.
chr10	30996837	.	G	GC	680.85	PASS	AC=22;AF=0.917;AN=24;BaseQRankSum=-1.733;DP=49;FS=0.000;HRun=10;HaplotypeScore=22.7678;InbreedingCoeff=0.1627;MQ=52.08;MQ0=0;MQRankSum=-1.733;QD=16.61;ReadPosRankSum=-1.733;VQSLOD=2.1176;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,1:1:3.01:31,3,0	1/1:1,0:1:3:25,3,0	./.	0/0:1,0:1:3.01:0,3,36	./.	./.	1/1:6,6:12:27.50:282,28,0	1/1:0,1:1:3.01:31,3,0	1/1:0,1:1:3.01:30,3,0	./.	1/1:2,1:3:6:55,6,0	./.	./.	./.	1/1:0,1:1:3.01:30,3,0	./.	1/1:2,2:4:11.99:122,12,0	1/1:3,2:5:7.57:76,8,0	./.	./.	1/1:6,4:10:5.78:49,6,0	./.	./.	1/1:1,1:2:3.01:32,3,0	./.	./.	./.	./.
chr10	30997065	.	TG	T	10962.73	PASS	AB=0.543;AC=35;AF=0.625;AN=56;BaseQRankSum=8.906;DP=505;FS=2.530;HRun=2;HaplotypeScore=53.1027;InbreedingCoeff=0.9022;MQ=92.12;MQ0=0;MQRankSum=-3.694;QD=34.47;ReadPosRankSum=3.425;VQSLOD=5.1244;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,30:31:81.26:1052,81,0	1/1:0,5:5:12.04:156,12,0	0/0:25,0:25:69.15:0,69,995	0/0:17,0:17:41.09:0,41,565	1/1:0,9:9:24.08:312,24,0	1/1:0,17:17:48.16:623,48,0	1/1:0,32:32:78.25:1013,78,0	1/1:0,26:26:75.23:959,75,0	0/0:14,0:14:39.13:0,39,585	0/0:17,0:17:51.17:0,51,765	0/0:3,0:3:9.03:0,9,135	1/1:0,11:11:27.09:351,27,0	1/1:0,10:10:27.09:351,27,0	1/1:0,21:21:60.20:779,60,0	0/0:15,0:15:45.14:0,45,656	1/1:0,8:8:24.08:312,24,0	1/1:1,24:25:66.21:857,66,0	1/1:1,44:45:99:1473,114,0	0/0:22,0:22:63.21:0,63,940	0/0:11,0:11:30.10:0,30,450	0/0:58,0:58:99:0,175,2585	1/1:0,6:6:18.06:233,18,0	1/1:0,10:10:27.09:351,27,0	1/1:0,29:29:84.27:1091,84,0	1/1:0,7:7:18.06:234,18,0	0/1:3,16:19:77.75:545,0,78	0/0:5,0:5:12.04:0,12,180	1/1:0,7:7:21.07:273,21,0
chr10	30997362	.	C	CT	3103.26	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-10.654;DP=539;FS=5.053;HRun=1;HaplotypeScore=49.7153;InbreedingCoeff=0.9974;MQ=78.81;MQ0=0;MQRankSum=0.201;QD=37.84;ReadPosRankSum=1.922;VQSLOD=4.0769;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:78.25:0,78,1012	0/0:12,0:12:36.12:0,36,467	0/0:11,0:11:21.39:0,21,206	0/0:13,0:13:23.27:0,23,326	0/0:26,0:26:75.23:0,75,957	0/0:29,0:29:87.26:0,87,1102	0/0:14,0:14:42.14:0,42,544	0/0:37,0:37:99:0,111,1440	0/0:28,0:28:81.26:0,81,1050	0/0:18,0:18:54.18:0,54,701	0/0:19,0:19:54.18:0,54,701	0/0:17,0:17:48.15:0,48,611	0/0:13,0:13:39.11:0,39,492	0/0:14,0:14:39.11:0,39,490	0/0:29,0:29:81.23:0,81,1009	0/0:20,0:20:60.15:0,60,733	0/0:22,0:22:66.18:0,66,824	0/0:11,0:11:33.11:0,33,426	1/1:2,11:13:33.10:477,33,0	1/1:0,26:26:78.26:1168,78,0	1/1:0,15:15:39.13:585,39,0	0/0:16,0:16:42.14:0,42,543	0/0:18,0:18:48.14:0,48,609	0/0:12,0:12:36.12:0,36,467	0/0:18,0:17:54.17:0,54,687	0/0:26,0:26:69.22:0,69,884	1/1:3,25:28:69.23:1034,69,0	0/0:8,0:8:24.08:0,24,312
chr10	30998899	.	T	TTTGTTG	5066.26	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-6.707;DP=769;FS=2.362;HRun=0;HaplotypeScore=155.6619;InbreedingCoeff=0.9948;MQ=67.38;MQ0=1;MQRankSum=-9.038;QD=46.48;ReadPosRankSum=-0.109;VQSLOD=4.9952;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:34.18:0,34,1206	0/0:16,0:16:33.11:0,33,689	0/0:36,0:29:36.10:0,36,612	0/0:27,0:22:28.48:0,28,483	0/0:26,0:26:57.18:0,57,1146	0/0:25,0:25:45.14:0,45,837	0/0:26,0:26:47.37:0,47,928	0/0:30,0:30:45.15:0,45,829	0/0:33,0:33:78.26:0,78,1552	0/0:43,0:42:84.29:0,84,1718	0/0:28,0:28:63.22:0,63,1306	0/0:26,0:26:54.17:0,54,1046	0/0:16,0:17:39.13:0,39,750	0/0:35,0:35:60.20:0,60,1141	0/0:21,0:21:45.15:0,45,937	0/0:32,0:32:63.22:0,63,1301	0/0:13,0:13:34.36:0,34,634	0/0:24,0:24:54.17:0,54,986	1/1:9,10:20:30.10:872,30,0	1/1:9,25:36:75.18:1982,75,0	1/1:10,8:18:15.05:409,15,0	0/0:30,0:30:68.88:0,69,1364	0/0:36,0:36:75.19:0,75,1339	0/0:30,0:30:72.21:0,72,1444	0/0:25,0:25:54.16:0,54,1014	0/0:30,0:30:57.16:0,57,994	1/1:12,23:35:57.20:1803,57,0	0/0:20,0:20:30.10:0,30,624
chr10	31000698	.	CA	C	2366.08	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=9.651;DP=579;FS=12.987;HRun=2;HaplotypeScore=65.6896;InbreedingCoeff=0.9890;MQ=78.71;MQ0=1;MQRankSum=-5.435;QD=30.73;ReadPosRankSum=1.475;VQSLOD=2.0453;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,105,1528	0/0:7,0:7:21.06:0,21,295	0/0:20,0:19:41.39:0,41,583	0/0:14,0:13:36.04:0,36,471	0/0:25,0:25:72.22:0,72,1035	0/0:17,0:17:48.13:0,48,678	0/0:17,0:17:51.16:0,51,742	0/0:34,0:33:96.32:0,96,1412	0/0:16,0:16:45.15:0,45,672	0/0:27,0:27:78.26:0,78,1164	0/0:19,0:19:51.17:0,51,760	0/0:24,0:24:72.24:0,72,1079	0/0:15,0:15:42.13:0,42,609	0/0:19,0:19:54.17:0,54,790	0/0:21,0:21:63.21:0,63,940	0/0:24,0:24:66.21:0,66,965	0/0:35,0:35:99:0,102,1456	0/0:19,0:19:54.16:0,54,782	1/1:2,17:17:45.15:583,45,0	1/1:0,21:21:57.19:739,57,0	1/1:0,9:9:21.07:272,21,0	0/0:10,0:10:30.09:0,30,432	0/0:26,0:26:78.24:0,78,1130	0/0:14,0:14:39.13:0,39,585	0/0:23,0:23:66.19:0,66,946	0/0:36,0:36:99:0,99,1446	1/1:0,28:28:72.23:932,72,0	0/0:4,0:4:12.04:0,12,180
chr10	31000714	.	A	AT	1128.63	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=3.926;DP=528;FS=11.648;HRun=13;HaplotypeScore=70.5673;InbreedingCoeff=0.7709;MQ=71.15;MQ0=3;MQRankSum=-6.141;QD=10.85;ReadPosRankSum=-2.443;VQSLOD=1.3240;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,1:28:43.47:0,43,439	0/0:5,0:5:11.89:0,12,82	0/1:13,0:12:23.47:23,0,29	0/0:12,0:8:2.93:0,3,20	0/0:23,1:25:33.64:0,34,366	0/0:19,0:20:46.66:0,47,314	0/0:11,0:11:26.71:0,27,182	0/0:29,0:32:46.21:0,46,385	0/0:11,0:11:29.74:0,30,204	0/0:7,0:23:35.99:0,36,117	0/0:2,0:21:34.61:0,35,100	0/0:16,0:16:35.65:0,36,246	0/0:15,0:15:35.63:0,36,242	0/0:15,0:16:37.70:0,38,251	0/0:18,0:18:35.56:0,36,240	0/0:21,0:21:50.54:0,51,349	0/0:28,0:27:74.27:0,74,504	0/0:19,0:19:47.52:0,48,329	1/1:13,12:23:15.29:272,15,0	1/1:6,18:25:55.29:497,55,0	1/1:6,2:8:6.01:56,6,0	0/0:9,0:9:17.81:0,18,122	0/0:19,0:19:29.08:0,29,193	0/0:13,0:13:34.74:0,35,230	0/0:22,0:22:59.38:0,59,405	0/0:32,1:35:26.13:0,26,299	1/1:14,16:30:33.31:438,33,0	0/0:4,0:5:7.99:0,8,47
chr10	31001180	.	TTGTGTGTGTG	T	266.75	PASS	AB=1.000;AC=7;AF=0.135;AN=52;BaseQRankSum=1.653;DP=525;FS=8.366;HRun=0;HaplotypeScore=151.9859;InbreedingCoeff=0.3691;MQ=62.30;MQ0=15;MQRankSum=1.055;QD=3.46;ReadPosRankSum=0.811;VQSLOD=2.3409;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:14:6.02:0,6,269	0/0:4,0:4:3.01:0,3,130	./.	./.	0/0:10,0:10:3.01:0,3,130	0/0:21,0:20:9.92:0,10,387	0/0:18,0:17:2.95:0,3,25	0/0:31,0:30:20.89:0,21,450	0/0:15,0:15:19.31:0,19,698	0/0:22,0:21:33.10:0,33,1303	0/0:4,0:9:14.08:0,14,503	0/0:19,0:22:18.53:0,19,578	0/0:18,0:20:6.02:0,6,272	0/0:15,0:15:9.97:0,10,397	0/0:20,0:20:30.10:0,30,1291	0/0:22,0:22:9.02:0,9,353	0/0:21,0:20:9:0,9,227	0/0:12,0:11:12.29:0,12,360	1/1:13,1:13:2.68:88,3,0	1/1:13,0:13:3.01:50,3,0	0/1:27,0:26:61.92:62,0,70	0/0:16,0:16:5.99:0,6,209	0/0:13,0:12:3.48:0,3,106	0/0:21,0:21:8.85:0,9,410	0/0:14,0:13:6.01:0,6,154	0/0:19,0:19:29.46:0,29,1129	1/1:13,7:23:8.82:184,9,0	0/0:13,0:12:6.02:0,6,243
chr10	31002096	.	G	GT	657.04	PASS	AB=0.902;AC=15;AF=0.268;AN=56;BaseQRankSum=-2.233;DP=623;FS=3.723;HRun=8;HaplotypeScore=115.1935;InbreedingCoeff=-0.2170;MQ=69.18;MQ0=8;MQRankSum=-2.312;QD=1.97;ReadPosRankSum=-1.341;VQSLOD=-0.5474;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:41,2:43:9.22:0,9,304	0/0:8,0:8:15.51:0,16,85	0/0:45,0:22:49.69:0,50,462	0/1:44,0:24:19.85:20,0,301	0/1:28,2:30:29.82:30,0,174	0/1:13,1:14:18.75:19,0,113	0/1:25,1:26:13.21:13,0,170	0/1:19,2:22:14.56:15,0,149	0/0:12,0:12:33.09:0,33,411	1/1:7,15:22:37.71:425,38,0	0/1:8,10:18:28.28:112,0,28	0/0:23,0:23:33.85:0,34,212	0/1:16,3:19:21.77:22,0,119	0/0:19,0:19:5.89:0,6,104	0/0:21,0:20:51.17:0,51,659	0/1:20,2:22:8.97:9,0,172	0/1:30,2:31:29.88:30,0,269	0/0:21,0:20:28.17:0,28,139	0/0:18,0:18:2.37:0,2,96	0/1:22,2:24:15.83:16,0,159	0/0:6,0:6:17.18:0,17,98	0/0:16,0:16:22.39:0,22,102	0/1:16,1:17:11.24:11,0,99	0/1:15,5:20:73.80:74,0,131	0/0:23,1:24:4.86:0,5,220	0/0:26,0:26:8.78:0,9,188	0/1:21,1:22:20.51:21,0,137	0/0:6,0:6:13.52:0,14,64
chr10	31002271	.	AC	A	3798.32	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=14.518;DP=667;FS=0.395;HRun=1;HaplotypeScore=72.2031;InbreedingCoeff=0.9999;MQ=82.18;MQ0=0;MQRankSum=-1.032;QD=36.52;ReadPosRankSum=0.766;VQSLOD=3.9964;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:93.30:0,93,1464	0/0:14,0:14:39.13:0,39,623	0/0:21,0:21:60.19:0,60,882	0/0:17,0:17:51.06:0,51,674	0/0:37,0:37:99:0,111,1751	0/0:27,0:27:81.28:0,81,1291	0/0:17,0:17:51.17:0,51,815	0/0:33,0:33:99:0,99,1554	0/0:31,0:31:93.32:0,93,1482	0/0:30,0:30:90.30:0,90,1415	0/0:27,0:27:81.26:0,81,1265	0/0:35,0:35:99:0,102,1550	0/0:25,0:25:75.26:0,75,1199	0/0:20,0:20:60.20:0,60,959	0/0:29,0:28:84.29:0,84,1343	0/0:28,0:28:84.29:0,84,1343	0/0:26,0:26:78.23:0,78,1188	0/0:18,0:18:51.17:0,51,805	1/1:0,21:21:63.19:805,63,0	1/1:0,26:26:78.25:1007,78,0	1/1:0,29:29:81.26:1052,81,0	0/0:17,0:17:51.17:0,51,815	0/0:13,0:13:36.05:0,36,576	0/0:16,0:16:48.16:0,48,767	0/0:19,0:19:57.18:0,57,889	0/0:21,0:21:63.21:0,63,985	1/1:0,28:28:72.23:935,72,0	0/0:11,0:11:33.11:0,33,527
chr10	31002596	.	TA	T	2391.27	PASS	AB=0.909;AC=9;AF=0.161;AN=56;BaseQRankSum=11.243;DP=683;FS=0.784;HRun=10;HaplotypeScore=66.1514;InbreedingCoeff=0.8638;MQ=76.14;MQ0=0;MQRankSum=-2.059;QD=17.33;ReadPosRankSum=1.887;VQSLOD=4.3771;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:21:63:0,63,678	0/0:15,0:15:45.12:0,45,491	0/0:18,1:18:17.81:0,18,361	0/0:16,0:16:33.04:0,33,335	0/0:21,0:22:60:0,60,645	0/0:31,0:33:77.88:0,78,825	0/0:28,0:28:72.15:0,72,771	0/0:36,1:37:67.19:0,67,970	0/0:33,0:33:62.98:0,63,875	0/0:25,2:27:8.09:0,8,545	0/0:21,1:22:34.11:0,34,604	0/0:20,1:21:34.11:0,34,605	0/0:23,0:24:62.99:0,63,669	0/1:18,2:20:3.98:4,0,416	0/0:31,0:32:93.06:0,93,999	0/0:23,1:24:46.13:0,46,730	0/0:25,1:28:42.93:0,43,652	0/0:15,0:15:45.12:0,45,498	1/1:3,14:17:11.81:331,12,0	1/1:5,29:34:58.74:678,59,0	1/1:3,27:30:74.98:651,75,0	0/0:25,0:25:63.13:0,63,667	0/0:15,0:17:47.80:0,48,493	0/0:12,0:12:30.08:0,30,332	0/0:24,2:27:45.96:0,46,711	0/0:31,1:32:58.16:0,58,863	1/1:2,35:37:99:886,102,0	0/0:13,1:14:10.04:0,10,339
chr10	31002966	.	TGCAG	T	17290.68	PASS	AB=0.520;AC=35;AF=0.625;AN=56;BaseQRankSum=15.336;DP=611;FS=1.004;HRun=0;HaplotypeScore=108.0856;InbreedingCoeff=0.9330;MQ=69.57;MQ0=0;MQRankSum=-5.328;QD=47.76;ReadPosRankSum=5.517;VQSLOD=5.4267;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,37:38:87.30:1684,87,0	1/1:0,6:6:18.06:349,18,0	0/0:26,0:25:69.16:0,69,1597	0/0:16,0:15:37.94:0,38,983	1/1:1,19:20:45.15:870,45,0	1/1:0,25:25:66.23:1277,66,0	1/1:0,16:16:42.14:813,42,0	1/1:1,22:23:63.18:1113,63,0	0/0:24,0:24:72.23:0,72,1914	0/0:19,0:19:54.17:0,54,1380	0/0:12,0:12:33.10:0,33,843	1/1:0,29:29:72.25:1394,72,0	1/1:0,23:23:54.19:1045,54,0	1/1:0,23:23:60.21:1161,60,0	0/0:29,0:29:84.29:0,84,2300	1/1:1,16:17:42.14:812,42,0	1/1:0,23:23:63.22:1220,63,0	1/1:0,12:12:33.11:639,33,0	0/0:23,0:23:63.22:0,63,1707	0/0:29,0:29:81.26:0,81,2070	0/0:37,0:37:99:0,105,2811	1/1:1,23:24:66.23:1266,66,0	1/1:2,16:18:45.15:869,45,0	1/1:0,16:16:24.08:465,24,0	1/1:0,18:18:45.15:871,45,0	0/1:2,24:26:6.75:1152,0,7	0/0:34,0:33:99:0,99,2574	1/1:0,5:5:15.05:290,15,0
chr10	31003158	.	CAGGGCGGCCCTCT	C	6301.99	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=12.251;DP=617;FS=0.000;HRun=0;HaplotypeScore=283.0616;InbreedingCoeff=0.9886;MQ=82.26;MQ0=1;MQRankSum=-12.337;QD=100.03;ReadPosRankSum=0.868;VQSLOD=3.9745;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,102,6701	0/0:7,0:7:21.07:0,21,1136	0/0:19,0:19:57.19:0,57,2813	0/0:20,0:20:53.73:0,54,2173	0/0:22,0:22:66.19:0,66,4073	0/0:25,0:25:75.26:0,75,4915	0/0:19,0:19:57.20:0,57,3533	0/0:35,0:35:99:0,102,5866	0/0:26,0:26:78.27:0,78,5232	0/0:31,0:31:93.32:0,93,6106	0/0:12,0:12:36.11:0,36,2084	0/0:37,0:37:99:0,111,6887	0/0:25,0:25:75.23:0,75,4603	0/0:20,0:20:60.21:0,60,3858	0/0:23,0:23:69.20:0,69,4266	0/0:30,0:29:90.31:0,90,5560	0/0:22,0:21:63.22:0,63,4055	0/0:20,0:20:60.21:0,60,3763	1/1:0,5:5:15.05:614,15,0	1/1:1,23:24:69.24:2238,69,0	1/1:0,8:8:20.07:385,20,0	0/0:31,0:31:93.32:0,93,5802	0/0:23,0:23:66.23:0,66,4146	0/0:17,0:17:51.18:0,51,3217	0/0:28,0:28:84.28:0,84,5149	0/0:23,0:23:69.24:0,69,4290	1/1:1,25:26:78.27:3065,78,0	0/0:5,0:5:15.05:0,15,890
chr10	31003173	.	AGT	A	1849.13	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=11.818;DP=628;FS=5.242;HRun=0;HaplotypeScore=152.4633;InbreedingCoeff=0.9579;MQ=82.49;MQ0=1;MQRankSum=-10.619;QD=28.02;ReadPosRankSum=2.028;VQSLOD=4.9855;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,123,2498	0/0:5,0:5:15.05:0,15,305	0/0:21,0:21:63.20:0,63,1196	0/0:20,0:20:36.28:0,36,858	0/0:21,0:21:63.22:0,63,1279	0/0:28,0:28:81.28:0,81,1645	0/0:17,0:17:51.18:0,51,1035	0/0:34,0:34:96.33:0,96,1944	0/0:32,0:32:96.33:0,96,1949	0/0:32,0:32:96.32:0,96,1916	0/0:11,0:11:33.11:0,33,670	0/0:34,0:34:99:0,102,2069	0/0:25,0:25:75.24:0,75,1486	0/0:22,0:22:66.23:0,66,1334	0/0:24,0:24:72.23:0,72,1425	0/0:26,0:25:78.27:0,78,1583	0/0:25,0:24:72.23:0,72,1420	0/0:19,0:19:57.17:0,57,1100	1/1:0,7:7:18.04:253,18,0	1/1:1,23:24:44.55:591,45,0	1/1:0,8:10:5.48:58,5,0	0/0:28,0:28:84.29:0,84,1704	0/0:22,0:22:66.23:0,66,1340	0/0:20,0:20:60.21:0,60,1218	0/0:25,0:25:75.26:0,75,1524	0/0:23,0:23:69.24:0,69,1388	1/1:0,25:25:75.25:1100,75,0	0/0:6,0:6:18.06:0,18,343
chr10	31004053	.	TCA	T	136.86	PASS	AB=0.930;AC=10;AF=0.200;AN=50;BaseQRankSum=-2.128;DP=531;FS=9.667;HRun=0;HaplotypeScore=102.6230;InbreedingCoeff=0.2276;MQ=69.36;MQ0=9;MQRankSum=3.504;QD=0.98;ReadPosRankSum=2.057;VQSLOD=1.2514;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:29:0.46:1,0,0	0/0:9,0:9:3:0,3,26	./.	0/0:26,0:21:0:0,0,0	0/0:11,0:11:2.80:0,3,24	0/0:15,0:15:8.74:0,9,62	./.	0/0:38,0:38:17.87:0,18,156	0/1:15,2:18:52.82:53,0,193	1/1:14,0:14:2.95:19,3,0	1/1:9,8:18:14.87:145,15,0	0/0:22,0:22:8.66:0,9,75	0/0:20,0:19:8.88:0,9,75	0/0:19,0:19:3:0,3,25	0/1:16,2:18:26.08:26,0,159	0/0:16,0:16:11.66:0,12,99	0/0:19,0:19:5.99:0,6,50	0/0:16,0:15:5.98:0,6,47	0/0:18,0:17:17.93:0,18,187	0/0:8,0:8:3.01:0,3,40	0/0:23,0:21:3.01:0,3,43	0/0:21,0:21:17.97:0,18,150	0/0:12,0:12:5.74:0,6,37	0/1:13,0:13:0:0,0,0	0/0:19,0:20:16.56:0,17,135	0/1:28,0:27:11.32:11,0,80	0/0:17,0:17:5.96:0,6,46	./.
chr10	31004056	.	C	CACACACACAT	5434.40	PASS	AB=1.000;AC=33;AF=0.589;AN=56;BaseQRankSum=-1.771;DP=540;FS=1.107;HRun=0;HaplotypeScore=151.3047;InbreedingCoeff=0.3163;MQ=63.54;MQ0=11;MQRankSum=-3.233;QD=14.04;ReadPosRankSum=-0.699;VQSLOD=3.8853;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:28:18.84:88,0,19	1/1:9,0:9:9:118,9,0	0/0:32,0:24:54.07:0,54,545	0/0:24,0:17:39.02:0,39,385	1/1:11,0:11:15.33:121,15,0	0/1:16,0:16:21.85:234,0,22	1/1:25,0:25:33.13:409,33,0	1/1:34,0:34:63.57:811,64,0	0/0:17,0:17:45.01:0,45,816	0/0:13,0:13:32.92:0,33,292	0/0:19,0:19:35.89:0,36,496	1/1:22,0:22:9.02:286,9,0	0/1:21,0:20:9:338,0,9	1/1:3,14:19:3.01:154,3,0	0/0:23,0:22:47.99:0,48,764	1/1:15,0:15:11.98:344,12,0	1/1:21,0:21:6.02:192,6,0	0/1:17,0:16:10.32:90,0,10	0/1:17,0:16:99:297,0,113	0/1:8,0:8:17.59:30,0,18	0/0:25,0:23:17.28:0,17,145	1/1:23,0:23:31.02:599,31,0	1/1:13,0:12:2.91:95,3,0	0/1:14,0:14:0:0,0,0	0/1:21,0:21:13.16:198,0,13	1/1:31,0:29:26.96:685,27,0	0/1:18,0:18:99:224,0,185	1/1:4,0:4:9:122,9,0
chr10	31004058	.	C	CACACACAT	6072.67	PASS	AB=0.761;AC=33;AF=0.589;AN=56;BaseQRankSum=-4.718;DP=565;FS=0.495;HRun=0;HaplotypeScore=138.6913;InbreedingCoeff=0.3229;MQ=62.21;MQ0=12;MQRankSum=-2.368;QD=14.88;ReadPosRankSum=0.179;VQSLOD=3.4181;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:30:6.61:123,0,7	1/1:9,0:9:9:123,9,0	0/0:32,0:24:54.07:0,54,545	0/0:24,0:16:38.81:0,39,385	1/1:11,0:11:14.97:120,15,0	0/1:6,10:21:19.91:314,0,20	1/1:27,0:27:31.38:465,31,0	1/1:34,0:34:69.14:784,69,0	0/0:16,0:16:48.01:0,48,746	0/0:14,0:14:32.96:0,33,300	0/0:20,0:20:38.89:0,39,480	1/1:2,19:22:9.03:386,9,0	0/1:5,13:19:7.92:438,0,8	1/1:19,0:19:3.01:109,3,0	0/0:23,0:22:50.98:0,51,712	1/1:4,10:17:6.40:450,6,0	1/1:2,17:21:9.03:303,9,0	0/1:4,13:18:10.32:123,0,10	0/1:17,0:16:99:237,0,116	0/1:8,0:8:17.95:30,0,18	0/0:28,0:25:23.69:0,24,197	1/1:23,0:23:44.96:642,45,0	1/1:12,1:12:3.01:129,3,0	0/1:4,10:20:0:0,0,0	0/1:7,13:25:41.06:273,0,41	1/1:6,23:29:14.98:735,15,0	0/1:17,0:17:99:168,0,201	1/1:4,0:4:9:122,9,0
chr10	31004060	.	C	CACACAT	4640.94	PASS	AB=0.961;AC=26;AF=0.464;AN=56;BaseQRankSum=-1.499;DP=576;FS=0.490;HRun=0;HaplotypeScore=132.4370;InbreedingCoeff=-0.0238;MQ=60.82;MQ0=14;MQRankSum=-3.069;QD=11.63;ReadPosRankSum=2.781;VQSLOD=3.2730;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:10,22:34:18.14:77,0,18	1/1:9,0:9:9:122,9,0	0/0:34,0:24:54.07:0,54,545	0/0:24,0:16:38.60:0,39,385	1/1:11,0:11:14.96:120,15,0	0/1:22,1:23:21.90:257,0,22	0/1:29,0:29:54.11:250,0,54	1/1:33,0:33:48.66:648,49,0	0/0:17,0:17:50.98:0,51,679	0/0:13,0:13:35.93:0,36,320	0/0:19,0:19:44.88:0,45,472	0/1:22,0:22:12.89:238,0,13	0/1:20,0:19:8.92:314,0,9	1/1:19,0:19:3.01:83,3,0	0/0:23,0:22:47.98:0,48,568	0/1:16,1:17:25.24:337,0,25	1/1:20,0:20:9.03:204,9,0	0/1:19,0:18:31.25:75,0,31	0/1:17,0:16:99:186,0,116	0/1:8,0:8:17.96:30,0,18	0/0:28,0:25:26.72:0,27,217	0/1:23,0:24:0.53:608,0,1	1/1:5,8:13:2.91:83,3,0	0/0:19,0:19:0:0,0,0	0/1:27,0:27:34.95:196,0,35	0/1:30,0:28:4.16:585,0,4	0/1:17,0:17:99:117,0,196	0/1:6,0:6:29.90:112,0,30
chr10	31005866	.	T	TACAC	1381.66	PASS	AB=0.791;AC=27;AF=0.482;AN=56;BaseQRankSum=-1.930;DP=708;FS=0.000;HRun=0;HaplotypeScore=160.5859;InbreedingCoeff=0.2246;MQ=67.95;MQ0=12;MQRankSum=2.443;QD=2.93;ReadPosRankSum=-1.051;VQSLOD=2.2415;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:52:54.53:0,55,502	1/1:4,0:9:13.72:61,14,0	0/1:33,0:19:0:0,0,0	0/1:35,0:22:0:0,0,0	0/0:10,0:21:18.02:0,18,167	1/1:7,10:18:9.03:214,9,0	0/0:7,0:20:33.04:0,33,307	0/1:24,0:24:38.81:39,0,93	0/0:25,0:28:40.64:0,41,520	1/1:22,0:26:28.86:444,29,0	1/1:25,0:25:3.01:52,3,0	0/1:12,0:24:21.98:22,0,36	0/1:19,0:29:19.51:20,0,104	0/1:20,0:29:35.16:35,0,53	0/0:31,0:34:51.16:0,51,766	1/1:16,0:30:28.32:124,28,0	0/1:16,0:37:25.08:64,0,25	0/1:16,0:29:58.48:71,0,58	0/0:10,0:16:9.01:0,9,84	0/0:8,0:22:28.92:0,29,224	0/0:15,0:22:2.22:0,2,7	1/1:12,0:24:19.08:84,19,0	0/1:15,0:25:20.51:132,0,21	0/1:14,0:22:32.48:32,0,40	1/1:8,0:15:5.49:24,5,0	1/1:12,0:20:21.24:121,21,0	0/0:10,0:20:26.66:0,27,216	0/1:10,0:14:23.23:23,0,205
chr10	31006768	.	TCATGGA	T	2794.08	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.806;DP=722;FS=0.000;HRun=0;HaplotypeScore=149.3312;InbreedingCoeff=0.9783;MQ=88.27;MQ0=0;MQRankSum=-8.270;QD=57.02;ReadPosRankSum=-1.179;VQSLOD=3.2285;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,111,3844	0/0:11,0:11:33.11:0,33,1177	0/0:25,0:25:72.24:0,72,2216	0/0:31,0:31:84.28:0,84,2531	0/0:23,0:23:69.24:0,69,2456	0/0:30,0:30:84.26:0,84,2816	0/0:22,0:22:63.22:0,63,2222	0/0:45,0:45:99:0,129,4297	0/0:30,0:30:87.28:0,87,2888	1/1:1,26:27:75.23:1674,75,0	1/1:4,18:22:54.19:1241,54,0	0/0:22,0:22:66.21:0,66,2206	0/0:26,0:26:75.26:0,75,2512	0/0:22,0:22:63.22:0,63,2219	0/0:37,0:37:99:0,108,3592	0/0:23,0:23:66.23:0,66,2353	0/0:19,0:19:51.17:0,51,1785	0/0:18,0:18:51.18:0,51,1756	0/0:13,0:13:33.11:0,33,1118	0/0:26,0:26:75.26:0,75,2660	0/0:29,0:29:87.30:0,87,3083	0/0:22,0:22:66.23:0,66,2329	0/0:24,0:24:69.22:0,69,2365	0/0:28,0:28:84.29:0,84,2980	0/0:25,0:25:72.25:0,72,2538	0/0:26,1:27:10.55:0,11,2656	0/0:38,0:37:99:0,111,3920	0/0:19,0:19:57.20:0,57,2012
chr10	31007749	.	T	TATAC	2563.25	PASS	AB=1.000;AC=27;AF=0.500;AN=54;BaseQRankSum=-7.138;DP=594;FS=2.200;HRun=0;HaplotypeScore=126.0780;InbreedingCoeff=-0.1973;MQ=59.18;MQ0=5;MQRankSum=-0.735;QD=5.47;ReadPosRankSum=6.096;VQSLOD=1.7803;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:42,0:40:99:129,0,174	0/1:8,0:8:32.98:33,0,64	./.	0/0:21,0:17:5.95:0,6,43	0/1:21,0:20:68.95:69,0,126	0/1:21,0:21:99:122,0,183	0/1:14,0:14:29.32:64,0,29	1/1:27,0:26:23.88:189,24,0	0/0:16,0:16:26.85:0,27,290	1/1:19,0:16:20.99:242,21,0	1/1:31,0:30:14.96:138,15,0	0/1:38,0:38:99:109,0,384	0/1:15,0:15:71.81:119,0,72	0/1:19,0:19:22.98:23,0,182	0/0:18,0:18:5.25:0,5,69	0/1:30,0:30:94.53:95,0,261	0/1:21,0:21:99:130,0,107	0/1:12,0:12:24.55:59,0,25	0/0:10,0:9:2.96:0,3,19	0/0:18,0:17:11.51:0,12,82	0/0:19,0:16:5.99:0,6,50	0/1:22,0:22:99:133,0,121	0/1:22,0:22:91.01:91,0,108	0/1:27,0:27:87.12:87,0,112	1/1:19,9:32:24.04:515,24,0	1/1:17,0:16:9.97:197,10,0	0/1:15,0:13:16.39:27,0,16	1/1:16,0:16:21.81:165,22,0
chr10	31007781	.	CAT	C	288.49	PASS	AB=0.976;AC=8;AF=0.143;AN=56;BaseQRankSum=1.257;DP=627;FS=0.599;HRun=0;HaplotypeScore=118.1480;InbreedingCoeff=0.1008;MQ=52.29;MQ0=17;MQRankSum=1.305;QD=2.20;ReadPosRankSum=-2.481;VQSLOD=1.7880;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:45:89.55:0,90,1143	0/0:9,0:9:27.02:0,27,359	0/0:6,0:4:8.69:0,9,73	0/0:10,0:6:13.93:0,14,118	0/0:20,0:19:52.24:0,52,620	0/0:27,0:27:65.41:0,65,955	0/0:18,0:17:34.91:0,35,455	0/0:45,0:41:80.76:0,81,838	0/0:24,0:24:16.06:0,16,681	0/1:20,0:17:79.74:80,0,228	0/0:30,0:29:5.67:0,6,208	0/0:38,0:37:99:0,99,1397	0/0:17,0:16:42.04:0,42,521	0/0:15,0:15:39.10:0,39,586	0/1:15,3:18:52.72:53,0,201	0/0:36,0:36:95.16:0,95,1312	0/0:22,0:22:57.93:0,58,725	0/0:12,0:12:23.05:0,23,267	0/1:15,0:14:9.30:23,0,9	1/1:20,0:19:1.09:123,1,0	0/1:18,0:15:6.69:61,0,7	0/0:28,0:28:68.81:0,69,891	0/0:22,1:23:19.11:0,19,657	0/0:18,1:18:39.01:0,39,476	0/0:30,0:30:54.13:0,54,632	0/1:23,0:20:12.53:13,0,243	0/1:17,0:15:8.02:67,0,8	0/0:18,0:17:20.29:0,20,255
chr10	31007783	.	T	TAC	1133.29	PASS	AB=0.987;AC=16;AF=0.286;AN=56;BaseQRankSum=0.618;DP=639;FS=0.000;HRun=0;HaplotypeScore=119.7146;InbreedingCoeff=0.4431;MQ=52.25;MQ0=17;MQRankSum=-1.424;QD=4.99;ReadPosRankSum=0.336;VQSLOD=2.4944;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:47:30.41:0,30,586	0/0:9,0:9:18.01:0,18,185	0/0:7,0:4:9.02:0,9,95	0/0:12,0:6:5.25:0,5,66	0/0:20,0:19:38.81:0,39,397	0/0:27,0:28:50.96:0,51,540	0/0:17,0:17:22.89:0,23,290	0/0:46,0:44:30.18:0,30,442	0/0:23,0:23:44.93:0,45,475	1/1:21,0:18:20.78:165,21,0	0/1:31,0:30:20.17:32,0,20	0/0:39,0:38:41.23:0,41,822	0/0:17,0:16:5.49:0,5,267	0/0:15,0:15:33.09:0,33,370	1/1:9,9:18:28.23:535,28,0	0/0:33,0:35:80.83:0,81,851	0/0:22,0:22:36.08:0,36,401	0/1:11,0:12:11.08:11,0,118	1/1:16,0:15:8.16:36,8,0	0/1:20,0:19:8.75:17,0,9	0/0:17,0:14:2.73:0,3,13	0/0:25,0:28:42.11:0,42,465	0/0:24,0:24:44.11:0,44,450	0/1:21,0:20:3.89:4,0,170	0/1:29,0:29:94.09:94,0,185	1/1:23,0:20:16.19:94,16,0	0/1:18,0:16:10.83:49,0,11	1/1:17,1:17:24.06:276,24,0
chr10	31007785	.	C	CAT	2569.63	PASS	AB=0.985;AC=23;AF=0.411;AN=56;BaseQRankSum=-9.403;DP=650;FS=7.502;HRun=0;HaplotypeScore=116.0751;InbreedingCoeff=-0.4423;MQ=52.12;MQ0=17;MQRankSum=0.161;QD=4.82;ReadPosRankSum=-1.330;VQSLOD=2.2999;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:53,0:50:99:117,0,138	0/1:9,0:9:23.30:23,0,87	0/0:7,0:4:9.03:0,9,116	0/0:13,0:7:14.57:0,15,139	0/1:19,0:18:48.50:49,0,148	0/1:28,0:28:99:104,0,137	0/1:18,1:18:72.99:73,0,112	0/1:49,0:45:58.45:204,0,58	0/0:25,0:25:59.96:0,60,746	0/1:24,0:21:64.40:97,0,64	0/1:31,0:30:99:101,0,163	0/1:38,1:38:90.91:91,0,261	0/1:18,0:17:68.73:107,0,69	0/1:16,0:16:13.94:14,0,124	0/1:18,0:18:82.13:202,0,82	0/1:37,0:37:67.17:67,0,251	0/1:22,0:22:80.39:117,0,80	0/1:12,0:12:48.08:48,0,53	0/0:18,0:17:23.95:0,24,149	0/0:20,0:19:18.39:0,18,147	0/0:16,0:13:9:0,9,89	0/1:29,0:29:83.32:119,0,83	0/1:24,0:24:70.52:71,0,109	0/1:20,0:19:83.77:84,0,128	0/1:18,7:25:28.49:262,0,28	1/1:3,19:19:7.14:365,7,0	0/0:18,0:16:5.34:0,5,193	1/1:6,13:18:24.08:422,24,0
chr10	31007787	.	C	CAT	376.63	PASS	AB=0.900;AC=4;AF=0.071;AN=56;BaseQRankSum=0.010;DP=647;FS=0.000;HRun=0;HaplotypeScore=128.3489;InbreedingCoeff=0.1788;MQ=51.86;MQ0=16;MQRankSum=1.776;QD=6.49;ReadPosRankSum=0.870;VQSLOD=3.2700;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:50:34.70:0,35,454	0/0:9,0:9:26.62:0,27,190	0/0:6,0:3:9.03:0,9,135	0/0:15,0:7:17.96:0,18,181	0/0:19,0:18:50.16:0,50,342	0/0:29,0:29:41.63:0,42,422	0/0:18,0:17:41.77:0,42,300	0/0:50,0:46:40.83:0,41,599	0/0:24,0:24:63.11:0,63,808	0/0:23,0:20:9.73:0,10,177	0/0:32,0:31:24.40:0,24,219	0/0:38,1:38:66.05:0,66,606	0/0:18,0:17:11.46:0,11,193	0/0:17,0:17:20.59:0,21,266	0/1:18,0:18:82.19:201,0,82	0/0:35,0:35:27.40:0,27,526	0/0:24,0:24:57.85:0,58,364	0/0:11,0:11:22.22:0,22,147	0/0:19,0:18:50.29:0,50,342	0/0:19,0:18:18.77:0,19,157	0/0:15,0:12:9:0,9,89	0/0:29,0:29:20.90:0,21,360	0/0:24,0:24:30.49:0,30,315	0/0:21,0:20:11.07:0,11,210	0/1:18,6:24:90.60:208,0,91	0/0:22,0:19:34.84:0,35,194	0/0:18,0:16:0.62:0,1,197	1/1:16,0:16:1:68,1,0
chr10	31009177	.	A	AG	974.09	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=5.647;DP=355;FS=2.559;HRun=2;HaplotypeScore=99.7589;InbreedingCoeff=0.8616;MQ=74.93;MQ0=0;MQRankSum=-4.785;QD=13.53;ReadPosRankSum=1.524;VQSLOD=3.0804;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:14:27.93:0,28,188	0/0:4,0:4:8.97:0,9,72	0/0:16,0:13:14.08:0,14,258	0/0:16,0:13:29.17:0,29,302	0/0:25,0:25:43.70:0,44,331	0/0:10,0:10:19.12:0,19,145	0/0:9,0:9:17.70:0,18,121	0/0:24,0:24:47.67:0,48,394	0/0:13,0:13:36.08:0,36,409	0/0:16,0:16:42.12:0,42,503	0/0:18,0:18:51.14:0,51,609	0/0:9,0:9:23.40:0,23,162	0/0:4,0:4:8.92:0,9,68	0/0:7,0:7:15.81:0,16,121	0/0:15,0:15:45.14:0,45,557	0/0:8,0:7:16.04:0,16,88	0/0:8,0:7:7.88:0,8,68	0/0:10,0:10:23.36:0,23,155	1/1:13,5:18:38.64:342,39,0	1/1:25,4:29:70.52:460,71,0	1/1:7,0:6:8.80:58,9,0	0/0:9,0:9:11.37:0,11,56	0/0:14,0:14:25.72:0,26,231	0/0:3,0:3:8.91:0,9,69	0/0:10,0:10:15.45:0,15,128	0/0:17,0:16:44.40:0,44,335	1/1:17,1:18:36.28:268,36,0	0/0:2,0:2:5.98:0,6,47
chr10	31009187	.	TG	T	3710.42	PASS	AB=0.945;AC=26;AF=0.464;AN=56;BaseQRankSum=0.203;DP=420;FS=29.237;HRun=1;HaplotypeScore=130.1120;InbreedingCoeff=-0.2967;MQ=58.32;MQ0=6;MQRankSum=-3.636;QD=11.14;ReadPosRankSum=-1.946;VQSLOD=0.0696;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:23:99:100,0,103	0/1:8,0:8:17.76:18,0,71	0/0:12,0:9:5.08:0,5,194	0/0:12,1:10:20.76:0,21,213	0/1:26,3:29:21.41:312,0,21	0/1:15,1:14:54.17:54,0,100	0/1:9,0:7:17.34:46,0,17	0/1:27,2:24:61.88:139,0,62	0/0:14,0:12:36.08:0,36,445	0/0:13,0:13:39.12:0,39,506	0/0:16,0:16:40.12:0,40,588	0/1:14,2:16:57.42:108,0,57	0/1:7,0:7:29.92:30,0,77	0/1:9,0:9:24.22:24,0,68	0/0:19,0:19:54.12:0,54,681	0/1:16,0:14:45.83:72,0,46	0/1:8,0:7:8.84:9,0,9	1/1:10,0:8:1.68:114,2,0	0/1:14,7:21:4.54:446,0,5	1/1:13,17:30:86.88:980,87,0	1/1:3,4:6:12.48:140,12,0	0/1:8,0:8:51.46:83,0,51	0/1:17,0:17:17.11:128,0,17	0/1:4,0:2:12.15:14,0,12	0/1:12,1:13:78.03:84,0,78	0/1:26,0:24:99:166,0,193	1/1:6,13:18:45.10:598,45,0	0/1:2,2:4:19.40:46,0,19
chr10	31009190	.	T	TG	562.40	PASS	AB=0.853;AC=6;AF=0.107;AN=56;BaseQRankSum=2.304;DP=420;FS=16.454;HRun=0;HaplotypeScore=143.1922;InbreedingCoeff=0.4737;MQ=56.76;MQ0=7;MQRankSum=-2.652;QD=7.40;ReadPosRankSum=1.453;VQSLOD=2.4687;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:21:38.88:0,39,383	0/0:8,0:8:21.07:0,21,194	0/0:11,0:8:2.02:0,2,206	0/0:13,0:10:18.03:0,18,210	0/0:29,0:29:81.82:0,82,680	0/0:15,0:13:35.96:0,36,362	0/0:8,0:6:17.87:0,18,149	0/0:27,0:22:45.56:0,46,373	0/0:14,0:12:36.11:0,36,488	0/0:12,0:12:36.12:0,36,503	0/0:20,0:20:51.16:0,51,696	0/0:16,0:16:44.48:0,44,397	0/0:8,0:8:22.80:0,23,225	0/0:9,0:9:22.35:0,22,210	0/0:19,0:19:54.18:0,54,755	0/0:15,0:13:35.74:0,36,305	0/0:8,0:7:6.43:0,6,60	0/0:11,0:8:22.87:0,23,167	0/1:15,6:21:85.97:241,0,86	1/1:23,5:29:18.36:318,18,0	1/1:7,0:6:6.10:41,6,0	0/0:9,0:9:20.33:0,20,174	0/0:17,0:17:40.33:0,40,403	0/0:4,0:2:5.95:0,6,59	0/0:14,0:14:38.95:0,39,346	0/0:27,0:25:71.60:0,72,690	0/1:17,1:17:20.86:89,0,21	0/0:4,0:4:12.01:0,12,126
chr10	31009193	.	GT	G	1937.68	PASS	AB=0.787;AC=24;AF=0.429;AN=56;BaseQRankSum=2.458;DP=408;FS=9.810;HRun=4;HaplotypeScore=134.4052;InbreedingCoeff=-0.1980;MQ=53.88;MQ0=8;MQRankSum=-5.468;QD=7.05;ReadPosRankSum=-0.753;VQSLOD=-0.1817;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:15,10:20:20.90:232,0,21	0/1:4,3:7:45.24:86,0,45	0/1:10,0:7:0.18:0,0,100	0/0:12,0:9:15.91:0,16,185	0/1:21,4:25:50.79:122,0,51	0/1:10,5:13:49.40:151,0,49	0/1:6,2:6:9.29:63,0,9	0/1:17,6:18:66.93:68,0,67	0/0:13,0:11:30.10:0,30,419	0/0:15,0:15:33.11:0,33,460	0/0:21,0:21:57.19:0,57,790	0/1:9,7:16:8.54:218,0,9	0/1:4,4:8:19.56:122,0,20	0/1:5,3:8:23.55:63,0,24	0/0:20,0:20:51.17:0,51,714	0/1:11,4:13:58.21:137,0,58	0/1:5,3:7:13.98:28,0,14	1/1:10,1:8:6.83:44,7,0	0/1:18,3:19:66.25:66,0,200	0/0:28,0:29:46.94:0,47,328	0/1:6,1:6:22.37:22,0,34	1/1:7,2:9:0.36:42,0,0	0/1:13,3:16:73.44:82,0,73	0/0:3,1:2:3.01:0,3,34	1/1:7,7:14:21.60:246,22,0	0/1:18,7:23:63.91:241,0,64	0/0:18,0:18:40:0,40,215	1/1:3,1:4:10.06:73,10,0
chr10	31009198	.	GTTT	G	1210.36	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=0.437;DP=416;FS=8.774;HRun=6;HaplotypeScore=146.9164;InbreedingCoeff=0.5280;MQ=44.07;MQ0=16;MQRankSum=-2.264;QD=8.65;ReadPosRankSum=-0.628;VQSLOD=-0.3273;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:23:25.02:25,0,296	0/0:10,0:9:26.93:0,27,292	0/0:6,0:3:3.01:0,3,54	0/0:8,0:6:5.38:0,5,61	0/0:24,0:22:37.25:0,37,457	0/0:16,0:14:26.58:0,27,156	0/0:8,0:6:13.51:0,14,121	0/1:22,0:17:99:120,0,156	0/0:12,0:10:27.08:0,27,540	0/0:15,0:15:22.75:0,23,660	0/0:24,0:23:42.22:0,42,1116	0/0:16,0:16:8.80:0,9,345	0/0:6,0:6:16.56:0,17,157	0/0:8,0:8:17.93:0,18,184	0/0:19,0:19:54.18:0,54,1079	0/0:16,0:13:23.61:0,24,288	0/0:12,0:9:0.29:0,0,59	0/0:12,0:8:6.55:0,7,47	1/1:15,4:17:26.59:329,27,0	1/1:26,3:29:41.56:491,42,0	1/1:7,0:6:11.79:108,12,0	0/0:11,0:11:8.14:0,8,103	0/0:18,0:18:30.89:0,31,328	0/0:5,0:3:6.85:0,7,46	0/1:16,0:15:3.74:4,0,255	0/0:25,0:22:33.46:0,33,335	1/1:16,3:18:32.61:296,33,0	0/0:4,0:4:11.87:0,12,129
chr10	31009201	.	T	TTG	1862.04	PASS	AB=0.891;AC=24;AF=0.429;AN=56;BaseQRankSum=0.170;DP=431;FS=72.498;HRun=0;HaplotypeScore=142.0819;InbreedingCoeff=-0.3306;MQ=43.35;MQ0=18;MQRankSum=-2.838;QD=5.46;ReadPosRankSum=2.716;VQSLOD=0.6444;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:25,2:24:99:136,0,234	0/1:8,2:9:84.33:84,0,142	0/0:6,0:3:3.01:0,3,46	0/0:7,0:4:3.01:0,3,46	0/1:21,2:22:99:118,0,276	0/1:15,1:14:40.24:40,0,83	0/1:8,1:7:23.29:23,0,97	0/1:20,3:18:95.05:183,0,95	0/0:12,0:10:27.08:0,27,394	0/1:16,0:18:1.13:1,0,508	0/0:24,0:24:42.22:0,42,860	0/1:15,1:16:46.77:47,0,313	0/1:6,2:8:88.70:93,0,89	0/1:7,1:8:64.62:65,0,103	0/0:22,0:21:57.19:0,57,844	0/1:14,2:13:30.17:30,0,138	0/1:13,0:10:21.93:22,0,79	0/0:14,0:9:18.11:0,18,122	0/1:19,0:17:14.80:122,0,15	1/1:26,0:26:22.32:300,22,0	1/1:5,0:5:9.92:52,10,0	0/1:8,2:10:47.25:94,0,47	0/1:15,2:18:20:20,0,272	0/1:4,1:3:12.52:49,0,13	0/1:18,1:18:65.09:65,0,225	0/1:24,5:26:99:234,0,169	1/1:18,0:17:38.89:252,39,0	0/0:4,0:4:12.03:0,12,141
chr10	31009211	.	T	TG	2017.90	PASS	AB=0.797;AC=17;AF=0.315;AN=54;BaseQRankSum=-1.260;DP=456;FS=6.846;HRun=1;HaplotypeScore=130.6386;InbreedingCoeff=-0.4709;MQ=35.85;MQ0=31;MQRankSum=-3.318;QD=6.98;ReadPosRankSum=3.004;VQSLOD=0.8521;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:19,17:32:99:358,0,108	0/1:9,2:10:83.97:102,0,84	0/0:2,0:1:3.01:0,3,39	./.	0/1:19,5:21:99:110,0,146	0/1:7,9:14:61.16:131,0,61	0/1:8,2:8:15.70:55,0,16	0/1:23,1:18:50.79:51,0,125	0/0:12,0:10:30.02:0,30,339	0/0:16,0:15:39.11:0,39,482	0/0:27,0:25:58.43:0,58,739	0/1:14,5:19:74.55:224,0,75	0/1:5,4:9:36.15:161,0,36	0/1:4,4:8:16.80:75,0,17	0/0:24,0:22:51.14:0,51,632	0/1:9,8:12:61.13:165,0,61	0/1:13,3:11:12.40:120,0,12	0/1:12,0:7:25.13:48,0,25	0/0:19,0:15:44.94:0,45,502	0/0:24,0:23:56.92:0,57,708	0/0:8,0:6:12:0,12,135	0/1:10,2:12:48.96:63,0,49	0/1:10,3:14:63.48:63,0,88	0/0:8,0:4:5.43:0,5,44	0/1:14,10:21:99:199,0,137	0/1:17,11:24:99:216,0,143	0/0:21,0:19:48.12:0,48,598	0/1:6,0:6:31.55:32,0,36
chr10	31009226	.	GTT	G	412.95	PASS	AB=0.722;AC=7;AF=0.135;AN=52;BaseQRankSum=0.280;DP=475;FS=25.511;HRun=12;HaplotypeScore=142.0137;InbreedingCoeff=0.7149;MQ=33.88;MQ0=41;MQRankSum=-2.956;QD=5.98;ReadPosRankSum=2.091;VQSLOD=0.0815;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:32:43.56:0,44,480	0/0:10,0:11:24.04:0,24,253	./.	./.	0/0:26,0:23:46.38:0,46,414	0/0:15,0:13:18.93:0,19,199	0/0:12,0:11:22.13:0,22,233	0/0:22,0:17:14.67:0,15,209	0/0:14,0:13:33.11:0,33,492	0/0:12,0:17:29.60:0,30,359	0/0:10,0:21:21.72:0,22,279	0/0:19,0:19:42.59:0,43,428	0/0:12,0:11:25.06:0,25,271	0/0:9,0:9:20.07:0,20,210	0/0:24,0:22:57.13:0,57,792	0/0:17,0:13:32.40:0,32,335	0/0:24,0:17:36.07:0,36,457	0/0:14,0:10:18.88:0,19,190	0/1:8,5:10:28.78:117,0,29	1/1:13,11:20:23.93:243,24,0	1/1:10,1:5:2.97:30,3,0	0/0:10,0:12:17.60:0,18,171	0/0:14,0:13:21.02:0,21,225	0/0:8,0:4:6.91:0,7,82	0/0:25,0:23:46.03:0,46,549	0/0:32,0:26:47.99:0,48,506	1/1:11,8:18:11.45:155,11,0	0/0:6,0:6:18.01:0,18,194
chr10	31011179	.	GGA	G	377.69	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.394;DP=664;FS=26.249;HRun=0;HaplotypeScore=83.0138;InbreedingCoeff=0.9864;MQ=96.54;MQ0=1;MQRankSum=-5.462;QD=29.05;ReadPosRankSum=1.786;VQSLOD=2.4813;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,117,2315	0/0:7,0:7:21.07:0,21,411	0/0:31,0:31:90.29:0,90,1729	0/0:33,1:34:91.44:0,91,1769	0/0:26,0:26:78.27:0,78,1550	0/0:29,0:29:87.29:0,87,1689	0/0:11,0:11:33.11:0,33,636	0/0:27,0:27:81.27:0,81,1587	0/0:21,0:21:63.20:0,63,1189	1/1:0,7:7:21.07:301,21,0	1/1:0,6:6:14.92:194,15,0	0/0:26,0:26:78.27:0,78,1569	0/0:32,0:32:96.32:0,96,1881	0/0:25,0:25:75.26:0,75,1524	0/0:30,0:30:90.31:0,90,1806	0/0:40,0:40:99:0,120,2358	0/0:24,0:24:72.25:0,72,1463	0/0:13,0:13:39.09:0,39,751	0/0:28,0:28:84.29:0,84,1618	0/0:19,0:19:54.19:0,54,1089	0/0:22,0:21:63.17:0,63,1190	0/0:24,0:24:69.24:0,69,1390	0/0:26,0:26:78.27:0,78,1566	0/0:31,0:31:93.32:0,93,1889	0/0:21,0:21:63.22:0,63,1270	0/0:23,1:24:27.26:0,27,1355	0/0:31,0:30:93.32:0,93,1872	0/0:10,0:10:30.10:0,30,609
chr10	31011186	.	T	TG	211.63	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.912;DP=653;FS=24.898;HRun=1;HaplotypeScore=68.2216;InbreedingCoeff=0.9607;MQ=99.20;MQ0=1;MQRankSum=-5.812;QD=16.28;ReadPosRankSum=1.431;VQSLOD=2.3860;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,108,1505	0/0:6,0:6:18.06:0,18,251	0/0:37,0:37:99:0,102,1344	0/0:33,0:33:93.15:0,93,1226	0/0:26,0:26:72.22:0,72,986	0/0:29,0:29:87.28:0,87,1201	0/0:10,0:10:30.08:0,30,400	0/0:30,0:30:87.27:0,87,1170	0/0:18,0:18:51.17:0,51,713	1/1:0,7:7:21.06:280,21,0	1/1:0,6:6:9:44,9,0	0/0:27,0:27:81.27:0,81,1122	0/0:30,0:30:90.24:0,90,1218	0/0:25,0:25:75.22:0,75,1015	0/0:28,0:28:84.27:0,84,1158	0/0:39,0:39:99:0,114,1560	0/0:25,0:25:75.21:0,75,1010	0/0:12,0:12:36.12:0,36,503	0/0:27,0:27:81.26:0,81,1115	0/0:19,0:19:57.19:0,57,795	0/0:18,0:17:51.17:0,51,711	0/0:25,0:25:72.23:0,72,989	0/0:28,0:28:72.22:0,72,988	0/0:31,0:31:93.31:0,93,1300	0/0:17,0:17:51.10:0,51,689	0/0:22,1:23:22.22:0,22,834	0/0:30,0:30:90.30:0,90,1258	0/0:11,0:11:33.11:0,33,461
chr10	31011535	.	G	GCA	6620.38	PASS	AB=1.000;AC=38;AF=0.731;AN=52;BaseQRankSum=-3.829;DP=351;FS=6.886;HRun=0;HaplotypeScore=82.1862;InbreedingCoeff=0.7635;MQ=59.66;MQ0=4;MQRankSum=-1.507;QD=25.17;ReadPosRankSum=1.753;VQSLOD=5.3687;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:20:45.14:674,45,0	1/1:5,0:5:13.68:83,14,0	0/1:8,0:4:4.31:6,0,4	0/1:11,0:4:4.92:5,0,14	1/1:7,0:7:21.07:309,21,0	1/1:19,0:19:51.12:755,51,0	1/1:18,0:18:17.17:538,17,0	1/1:20,0:20:48.16:722,48,0	0/0:13,0:13:24.08:0,24,311	./.	./.	1/1:18,0:18:45.03:571,45,0	1/1:17,0:16:44.67:548,45,0	1/1:22,0:22:50.69:661,51,0	0/0:20,0:20:45.11:0,45,547	1/1:16,0:16:41.73:521,42,0	1/1:11,0:11:11.85:237,12,0	1/1:0,17:17:3.01:37,3,0	0/0:16,0:16:39.52:0,40,475	0/0:3,0:3:9.01:0,9,96	0/0:16,0:15:36.08:0,36,417	1/1:8,0:8:15.05:212,15,0	1/1:13,0:12:5.38:59,5,0	1/1:5,10:15:5.98:52,6,0	1/1:7,0:7:17.99:251,18,0	1/1:7,0:7:20.98:248,21,0	0/0:20,0:20:51.11:0,51,591	1/1:3,0:3:9.03:131,9,0
chr10	31011537	.	A	ACA	6632.25	PASS	AB=1.000;AC=38;AF=0.731;AN=52;BaseQRankSum=-3.693;DP=346;FS=8.002;HRun=0;HaplotypeScore=79.8047;InbreedingCoeff=0.7680;MQ=59.49;MQ0=5;MQRankSum=-1.204;QD=25.81;ReadPosRankSum=1.559;VQSLOD=5.6282;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:20:45.14:674,45,0	1/1:5,0:5:13.68:83,14,0	0/1:8,0:4:4.31:6,0,4	0/1:11,0:4:4.92:5,0,14	1/1:7,0:7:21.07:309,21,0	1/1:19,0:19:51.12:755,51,0	1/1:17,0:17:17.17:538,17,0	1/1:2,16:19:48.16:722,48,0	0/0:13,0:13:24.08:0,24,311	./.	./.	1/1:17,0:17:45.03:571,45,0	1/1:16,0:15:44.67:548,45,0	1/1:22,0:22:50.69:661,51,0	0/0:21,0:21:45.11:0,45,547	1/1:16,0:16:41.73:521,42,0	1/1:10,0:10:20.98:249,21,0	1/1:17,0:17:3.01:37,3,0	0/0:16,0:16:39.52:0,40,475	0/0:3,0:3:9.01:0,9,96	0/0:15,0:14:36.08:0,36,417	1/1:8,0:8:15.05:212,15,0	1/1:6,6:12:5.38:59,5,0	1/1:14,0:14:5.98:52,6,0	1/1:7,0:7:17.99:251,18,0	1/1:7,0:7:20.98:248,21,0	0/0:20,0:20:51.11:0,51,591	1/1:3,0:3:9.03:131,9,0
chr10	31011540	.	CGAGAGAGAGAG	C	1889.26	PASS	AB=0.857;AC=20;AF=0.385;AN=52;BaseQRankSum=7.680;DP=340;FS=4.039;HRun=0;HaplotypeScore=144.1455;InbreedingCoeff=0.2065;MQ=58.53;MQ0=6;MQRankSum=-4.010;QD=9.26;ReadPosRankSum=3.001;VQSLOD=2.4260;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:20,1:20:5.13:37,0,5	1/1:0,4:5:15.05:316,15,0	0/0:8,0:4:5.51:0,6,51	0/0:10,0:3:6.89:0,7,64	0/1:8,0:7:3.81:18,0,4	0/1:17,0:18:5.63:67,0,6	0/1:17,0:17:36.41:59,0,36	0/0:21,0:21:18.46:0,18,75	0/0:7,0:11:24.08:0,24,516	./.	./.	1/1:13,1:18:7.46:347,7,0	0/1:12,4:15:30.35:224,0,30	0/1:16,2:22:15.68:253,0,16	0/0:16,0:21:45.15:0,45,962	0/1:12,2:16:12.80:194,0,13	0/1:5,2:8:0.78:160,0,1	1/1:17,0:17:2.50:9,2,0	0/0:17,0:17:44.06:0,44,815	0/0:5,0:5:11.98:0,12,366	0/0:14,0:13:36.11:0,36,999	0/0:6,1:7:6.94:0,7,28	1/1:7,4:11:6.75:72,7,0	1/1:9,3:12:4.82:80,5,0	0/1:5,2:7:0.26:68,0,0	0/1:5,1:7:15.17:147,0,15	0/0:18,0:18:51.16:0,51,1161	0/0:3,0:3:4.31:0,4,11
chr10	31011776	.	A	AG	1640.95	PASS	AC=38;AF=0.826;AN=46;BaseQRankSum=-4.352;DP=119;FS=2.571;HRun=7;HaplotypeScore=18.7799;InbreedingCoeff=0.5391;MQ=90.87;MQ0=0;MQRankSum=-2.026;QD=19.54;ReadPosRankSum=2.124;VQSLOD=2.1757;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,3:5:3.01:36,3,0	1/1:0,1:1:3.01:36,3,0	0/0:9,0:7:11.24:0,11,77	0/0:13,0:11:19.70:0,20,147	./.	1/1:4,1:5:6.02:72,6,0	./.	1/1:4,1:6:3.76:16,4,0	0/0:3,0:3:9.01:0,9,87	./.	./.	1/1:0,4:4:12.04:145,12,0	1/1:0,8:8:18.06:217,18,0	1/1:1,8:9:18.05:216,18,0	0/0:5,0:5:9.01:0,9,87	1/1:0,4:4:12.04:145,12,0	./.	1/1:0,4:4:6.02:72,6,0	1/1:2,1:3:3.01:36,3,0	1/1:0,3:3:6.02:72,6,0	1/1:2,7:9:21.06:253,21,0	1/1:1,1:2:3.01:36,3,0	1/1:0,1:1:3.01:36,3,0	1/1:1,2:3:6.02:72,6,0	1/1:2,5:7:12.04:145,12,0	1/1:2,2:4:8.03:64,8,0	1/1:1,1:2:3.01:36,3,0	1/1:2,2:4:6.02:72,6,0
chr10	31011835	.	T	TA	1012.15	PASS	AB=1.000;AC=9;AF=0.173;AN=52;BaseQRankSum=-5.796;DP=249;FS=0.000;HRun=7;HaplotypeScore=28.4016;InbreedingCoeff=0.8023;MQ=70.75;MQ0=0;MQRankSum=-0.545;QD=24.69;ReadPosRankSum=0.625;VQSLOD=2.9290;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:7:18.03:0,18,174	0/0:2,0:2:6.01:0,6,58	0/0:11,0:11:24.04:0,24,232	0/1:5,0:5:22.97:26,0,23	0/0:8,0:8:24.04:0,24,232	0/0:12,0:12:36.06:0,36,347	0/0:7,0:7:18.03:0,18,174	0/0:33,0:33:90.12:0,90,861	0/0:5,0:5:15.02:0,15,145	./.	./.	0/0:16,0:16:48.08:0,48,463	0/0:14,0:14:42.03:0,42,392	0/0:9,0:9:27.04:0,27,261	0/0:10,0:10:27.04:0,27,260	0/0:8,0:8:24.04:0,24,232	0/0:8,0:8:24.04:0,24,232	0/0:10,0:10:27.04:0,27,261	1/1:0,9:9:27.07:313,27,0	1/1:0,7:7:21.06:254,21,0	1/1:0,9:9:21.06:254,21,0	0/0:3,0:3:6:0,6,58	0/0:9,0:9:27.03:0,27,255	0/0:6,0:6:15.02:0,15,144	0/0:12,0:12:33.05:0,33,319	0/0:10,0:10:27.04:0,27,261	1/1:2,9:10:27.08:325,27,0	0/0:8,0:8:24.04:0,24,232
chr10	31013394	.	CCTGTTTAAA	C	6011.79	PASS	AB=1.000;AC=9;AF=0.173;AN=52;BaseQRankSum=13.078;DP=848;FS=1.485;HRun=0;HaplotypeScore=250.3576;InbreedingCoeff=0.8995;MQ=80.68;MQ0=0;MQRankSum=-11.845;QD=53.68;ReadPosRankSum=1.450;VQSLOD=4.1465;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,163,7715	0/0:10,0:10:30.10:0,30,1439	0/0:22,0:22:42.69:0,43,2003	0/1:24,0:24:3.08:3,0,1813	0/0:41,0:41:99:0,111,5244	0/0:20,0:20:60.21:0,60,2803	0/0:41,0:41:99:0,117,5654	0/0:44,0:44:99:0,132,5833	0/0:45,0:45:99:0,132,6203	./.	./.	0/0:42,0:42:99:0,123,5829	0/0:58,0:58:99:0,175,8216	0/0:40,0:40:99:0,120,5789	0/0:59,0:59:99:0,178,8563	0/0:46,0:46:99:0,138,6658	0/0:30,0:30:90.28:0,90,4138	0/0:23,0:23:66.17:0,66,3021	1/1:1,16:17:42.08:1114,42,0	1/1:1,18:19:51.18:1564,51,0	1/1:5,19:24:36:963,36,0	0/0:26,0:26:78.25:0,78,3642	0/0:39,0:39:99:0,117,5477	0/0:29,0:29:87.28:0,87,4077	0/0:24,0:24:72.25:0,72,3522	0/0:38,0:38:99:0,111,5266	1/1:3,25:28:75.26:2367,75,0	0/0:4,0:4:12.04:0,12,596
chr10	31014641	.	A	AAAAC	19047.99	PASS	AB=0.643;AC=41;AF=0.732;AN=56;BaseQRankSum=-11.482;DP=709;FS=2.018;HRun=0;HaplotypeScore=102.6531;InbreedingCoeff=0.7302;MQ=73.36;MQ0=3;MQRankSum=-2.588;QD=34.82;ReadPosRankSum=1.387;VQSLOD=4.8747;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,21:36:8.38:1252,8,0	1/1:1,11:12:30.10:728,30,0	0/0:28,0:26:27.08:0,27,416	0/0:29,0:28:27.09:0,27,421	1/1:14,10:25:36.12:832,36,0	1/1:8,19:28:54.19:1306,54,0	1/1:10,12:22:27.09:653,27,0	1/1:25,8:33:27.08:579,27,0	0/0:30,0:30:69.24:0,69,1118	0/0:12,0:24:30.84:0,31,270	0/0:8,0:18:27.03:0,27,252	1/1:13,24:37:14.40:1407,14,0	0/1:13,14:27:33.33:825,0,33	1/1:10,17:29:42.14:1007,42,0	0/0:33,0:33:72.22:0,72,1119	0/1:9,19:29:0.64:1028,0,1	1/1:9,16:27:34.69:1004,35,0	0/1:9,7:17:27.74:397,0,28	1/1:16,9:26:42.06:866,42,0	1/1:12,12:24:30.10:727,30,0	1/1:5,16:22:33.11:796,33,0	1/1:10,9:20:8:542,8,0	1/1:16,5:22:27.05:571,27,0	1/1:7,25:34:69.24:1653,69,0	1/1:5,15:20:30.06:675,30,0	1/1:8,7:15:21.07:510,21,0	1/1:10,25:33:11.39:1326,11,0	1/1:0,5:5:15.05:364,15,0
chr10	31016825	.	T	TTTAACG	39538.26	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-5.695;DP=662;FS=5.038;HRun=0;HaplotypeScore=129.8442;InbreedingCoeff=0.9673;MQ=82.04;MQ0=0;MQRankSum=-16.316;QD=75.74;ReadPosRankSum=0.348;VQSLOD=5.8914;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,24:27:60.21:2041,60,0	1/1:0,6:8:9.03:319,9,0	0/0:26,0:26:69.05:0,69,1293	0/0:27,0:27:67.47:0,67,1324	1/1:2,26:30:66.22:2000,66,0	1/1:0,26:28:57.20:2021,57,0	1/1:6,20:28:54.18:1853,54,0	1/1:10,25:42:99:3572,117,0	0/0:16,0:16:45.14:0,45,998	0/0:28,0:28:84.28:0,84,1930	0/0:17,0:17:51.14:0,51,1067	1/1:6,19:33:60.02:2012,60,0	1/1:4,15:23:51.17:1758,51,0	1/1:4,21:25:60.21:2010,60,0	0/0:26,0:26:75.25:0,75,1729	1/1:3,16:22:33.11:1130,33,0	1/1:4,20:26:63.22:2162,63,0	1/1:3,12:15:39.13:1385,39,0	1/1:6,14:25:75.26:2181,75,0	1/1:3,21:24:69.24:2310,69,0	1/1:6,12:20:36.12:1273,36,0	1/1:0,13:13:36.59:1276,37,0	1/1:4,18:24:60.06:2003,60,0	1/1:5,9:15:27.09:803,27,0	1/1:4,17:22:54.18:1721,54,0	1/1:8,21:30:78.22:2468,78,0	1/1:4,33:37:87.30:3030,87,0	1/1:3,2:5:6.02:213,6,0
chr10	31017049	.	T	TA	2562.36	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=-10.286;DP=615;FS=3.331;HRun=7;HaplotypeScore=87.5020;InbreedingCoeff=0.8725;MQ=72.09;MQ0=3;MQRankSum=-0.803;QD=22.09;ReadPosRankSum=0.732;VQSLOD=3.3042;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:90.05:0,90,837	0/0:4,0:4:12.02:0,12,116	0/0:20,0:13:14.75:0,15,79	0/1:24,0:13:6.84:7,0,34	0/0:24,0:24:69.09:0,69,660	0/0:14,0:14:39.03:0,39,366	0/0:18,0:18:47.99:0,48,441	0/0:37,0:37:89.81:0,90,868	0/0:21,0:21:54.05:0,54,511	0/0:24,0:24:69.07:0,69,646	0/0:18,0:18:54.09:0,54,521	0/0:29,0:29:54.97:0,55,523	0/0:29,0:29:72.09:0,72,688	0/0:21,0:21:48.04:0,48,454	0/0:21,0:21:57.08:0,57,546	0/0:17,0:17:39.04:0,39,366	0/0:23,0:23:54.06:0,54,514	0/0:24,0:24:53.94:0,54,513	1/1:5,30:35:90.23:1042,90,0	1/1:3,25:28:69.17:814,69,0	1/1:2,8:10:21.06:253,21,0	0/0:15,0:15:38.97:0,39,360	0/0:19,0:19:44.79:0,45,411	0/0:18,0:17:51.06:0,51,485	0/0:28,0:28:69.08:0,69,657	0/0:35,0:34:93.09:0,93,883	1/1:0,19:19:51.15:610,51,0	0/0:6,0:6:15.02:0,15,145
chr10	31017087	.	A	ATT	14083.34	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-15.674;DP=645;FS=4.626;HRun=8;HaplotypeScore=78.8411;InbreedingCoeff=0.9971;MQ=74.71;MQ0=9;MQRankSum=-3.082;QD=35.12;ReadPosRankSum=1.868;VQSLOD=4.9315;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,26:29:75.24:1153,75,0	1/1:1,8:9:24.08:381,24,0	0/0:24,0:19:34.99:0,35,374	0/0:30,0:22:31.99:0,32,325	1/1:2,27:29:74.74:1142,75,0	1/1:3,13:18:41.62:609,42,0	1/1:4,16:20:45.15:714,45,0	1/1:10,15:25:45.15:713,45,0	0/0:25,0:25:72.18:0,72,802	0/0:28,0:29:68.90:0,69,740	0/0:19,0:19:54.13:0,54,593	1/1:2,20:22:48.03:762,48,0	1/1:4,16:21:38.58:545,39,0	1/1:1,19:20:44.64:675,45,0	0/0:21,0:21:60.16:0,60,669	1/1:2,17:19:48.16:762,48,0	1/1:3,21:24:54.18:857,54,0	1/1:2,20:22:51.17:810,51,0	0/0:29,0:29:66.09:0,66,714	0/0:27,0:27:75.17:0,75,827	0/0:10,0:10:27.07:0,27,301	1/1:1,17:17:48.12:734,48,0	1/1:3,20:24:51:809,51,0	1/1:0,17:17:48.16:762,48,0	1/1:4,26:30:63.14:945,63,0	1/1:4,35:37:93.32:1473,93,0	0/0:30,0:30:78.20:0,78,870	1/1:3,8:11:15.05:238,15,0
chr10	31017248	.	TTG	T	13692.04	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=10.303;DP=768;FS=5.207;HRun=0;HaplotypeScore=99.2723;InbreedingCoeff=0.9727;MQ=59.43;MQ0=9;MQRankSum=-0.150;QD=23.69;ReadPosRankSum=4.461;VQSLOD=5.4656;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,39:50:90.19:1075,90,0	1/1:3,5:8:15:165,15,0	0/0:33,0:18:25.62:0,26,329	0/0:33,0:21:27.09:0,27,429	1/1:5,26:32:78.03:863,78,0	1/1:3,19:22:45.14:546,45,0	1/1:9,24:34:64.91:776,65,0	1/1:13,25:37:78.05:901,78,0	0/0:32,1:34:62.39:0,62,1415	0/0:23,1:24:17.36:0,17,740	0/0:33,0:33:84.17:0,84,1247	1/1:8,21:29:69.18:820,69,0	1/1:6,23:29:48.15:582,48,0	1/1:3,21:24:51.16:619,51,0	0/0:32,1:33:47.88:0,48,1263	1/1:2,21:22:54.17:655,54,0	1/1:5,23:29:66:763,66,0	1/1:4,24:29:63.02:742,63,0	1/1:12,9:20:27.08:327,27,0	1/1:8,23:32:65.92:731,66,0	1/1:9,22:30:56.84:666,57,0	1/1:7,13:20:33.10:400,33,0	1/1:3,14:17:36.01:421,36,0	1/1:6,24:29:57.13:674,57,0	1/1:4,16:20:38.95:451,39,0	1/1:8,23:30:23.84:786,24,0	1/1:2,23:25:54.17:655,54,0	1/1:0,2:2:6.02:73,6,0
chr10	31019176	.	G	GCTCC	1151.84	PASS	AB=1.000;AC=29;AF=0.604;AN=48;BaseQRankSum=-1.251;DP=148;FS=4.648;HRun=0;HaplotypeScore=31.7846;InbreedingCoeff=0.4566;MQ=92.53;MQ0=1;MQRankSum=-1.118;QD=16.00;ReadPosRankSum=-1.162;VQSLOD=2.3735;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,1:3:3.01:74,3,0	1/1:3,0:3:3.01:51,3,0	0/0:11,0:9:3.01:0,3,50	0/0:12,0:10:2.94:0,3,33	1/1:3,0:3:3.01:52,3,0	1/1:6,0:6:6.01:77,6,0	1/1:2,3:5:3.01:74,3,0	1/1:4,5:10:14.97:239,15,0	0/0:4,0:4:6.02:0,6,97	0/0:7,0:7:3:0,3,28	0/0:8,0:8:6.02:0,6,96	1/1:2,6:8:3.01:74,3,0	1/1:5,0:5:8.23:85,8,0	1/1:3,2:5:3.48:75,3,0	0/0:5,0:5:8.82:0,9,105	./.	./.	./.	0/1:6,0:6:2.18:2,0,28	0/0:5,0:5:3.01:0,3,47	0/0:11,0:10:6.95:0,7,119	1/1:3,0:3:3.01:74,3,0	1/1:4,0:4:6:61,6,0	1/1:3,0:3:2.99:24,3,0	./.	1/1:7,0:7:18.05:289,18,0	0/0:4,0:4:6.02:0,6,95	1/1:1,0:1:3.01:50,3,0
chr10	31019223	.	ACCTC	A	300.79	PASS	AB=0.955;AC=5;AF=0.156;AN=32;BaseQRankSum=2.697;DP=85;FS=15.515;HRun=0;HaplotypeScore=27.0871;InbreedingCoeff=0.1917;MQ=82.30;MQ0=6;MQRankSum=-1.642;QD=9.11;ReadPosRankSum=-1.115;VQSLOD=0.3909;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:14,0:7:2.22:0,2,7	0/1:20,0:9:11.04:11,0,37	./.	./.	./.	0/0:5,0:4:6.01:0,6,85	0/0:2,0:2:3:0,3,25	1/1:2,8:10:24.06:377,24,0	./.	0/0:3,0:3:3.01:0,3,74	0/0:2,0:2:6.02:0,6,127	./.	0/0:1,0:1:3.01:0,3,75	0/0:1,0:1:3.01:0,3,75	./.	0/0:2,0:2:3.01:0,3,71	1/1:2,0:1:2.04:6,2,0	0/0:1,0:1:3.01:0,3,71	0/0:6,0:5:4.71:0,5,147	./.	0/0:1,0:1:3.01:0,3,75	0/0:1,0:1:0.89:0,1,2	./.	./.	0/0:1,0:1:3.01:0,3,48	./.
chr10	31019874	.	CAA	C	9297.64	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-4.401;DP=632;FS=1.993;HRun=12;HaplotypeScore=88.2322;InbreedingCoeff=0.9859;MQ=70.14;MQ0=4;MQRankSum=-2.493;QD=21.52;ReadPosRankSum=5.141;VQSLOD=4.6407;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,18:23:42.06:427,42,0	1/1:1,8:9:21.04:214,21,0	0/0:11,0:10:17.25:0,17,154	0/0:9,0:9:11.40:0,11,186	1/1:6,24:31:53.79:601,54,0	1/1:9,29:40:59.58:715,60,0	1/1:4,0:18:30.17:130,30,0	1/1:7,25:32:75.10:747,75,0	0/0:11,0:11:27.08:0,27,385	0/0:5,0:14:33.05:0,33,345	0/0:7,0:31:80.51:0,81,787	1/1:3,16:20:45.07:458,45,0	1/1:6,28:35:89.56:866,90,0	1/1:1,26:27:69.14:701,69,0	0/0:21,0:25:70.66:0,71,877	1/1:3,25:29:56.85:632,57,0	1/1:2,18:20:48.09:488,48,0	1/1:2,21:22:51.09:519,51,0	0/0:7,0:17:45.06:0,45,454	0/0:8,0:34:83.51:0,84,803	0/0:6,0:18:33.04:0,33,341	1/1:0,18:19:47.81:470,48,0	1/1:1,20:21:53.90:549,54,0	1/1:3,12:15:21.57:294,22,0	1/1:2,19:21:10.88:476,11,0	1/1:3,24:29:37.37:664,37,0	0/0:10,0:29:59.58:0,60,619	1/1:4,12:17:35.76:347,36,0
chr10	31021780	.	C	CT	6070.82	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=8.959;DP=513;FS=4.084;HRun=9;HaplotypeScore=92.8542;InbreedingCoeff=0.9910;MQ=81.18;MQ0=0;MQRankSum=-4.592;QD=13.67;ReadPosRankSum=1.915;VQSLOD=5.0375;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:21:49.04:272,49,0	1/1:10,0:10:28.75:149,29,0	0/0:15,0:14:26.96:0,27,234	0/0:14,0:14:20.17:0,20,201	1/1:21,0:21:54.93:298,55,0	1/1:21,0:21:51.75:269,52,0	1/1:13,0:13:31.68:167,32,0	1/1:23,0:23:52.05:307,52,0	0/0:14,0:14:41.94:0,42,352	1/1:2,15:17:42.11:464,42,0	1/1:3,17:21:56.98:605,57,0	1/1:16,0:16:34.60:192,35,0	1/1:26,0:26:63.25:329,63,0	1/1:17,0:17:46:239,46,0	0/0:26,0:26:65.98:0,66,573	1/1:16,0:16:28.75:149,29,0	1/1:20,0:20:51.82:272,52,0	1/1:18,0:18:40.25:209,40,0	1/1:23,0:23:18.72:159,19,0	1/1:23,0:23:15.33:205,15,0	1/1:14,0:14:36.29:170,36,0	1/1:11,0:11:28.84:154,29,0	1/1:25,0:25:66.30:353,66,0	1/1:12,0:12:31.63:164,32,0	1/1:22,0:22:60.40:315,60,0	1/1:23,0:23:48.88:254,49,0	1/1:22,0:22:47.97:238,48,0	1/1:9,0:9:25.88:135,26,0
chr10	31021788	.	T	TA	2552.25	PASS	AB=1.000;AC=10;AF=0.179;AN=56;BaseQRankSum=-9.022;DP=531;FS=0.000;HRun=0;HaplotypeScore=108.4868;InbreedingCoeff=0.7557;MQ=83.22;MQ0=0;MQRankSum=-1.918;QD=20.58;ReadPosRankSum=-0.420;VQSLOD=5.0238;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:41.96:0,42,225	0/0:12,0:12:28.51:0,29,150	0/0:16,0:15:38.25:0,38,491	0/0:16,0:16:41.29:0,41,472	0/0:22,0:22:52.36:0,52,290	0/0:23,0:23:51.69:0,52,274	0/0:15,0:15:33.40:0,33,176	0/0:27,0:27:58.86:0,59,355	0/0:15,0:15:45.14:0,45,598	0/1:18,0:18:35.51:36,0,72	0/1:22,0:22:46.63:47,0,52	0/0:17,0:17:30.71:0,31,167	0/0:26,0:26:63.92:0,64,353	0/0:19,0:19:45.66:0,46,246	0/0:24,0:24:72.22:0,72,972	0/0:11,0:11:29.20:0,29,165	0/0:20,0:20:50.82:0,51,269	0/0:19,0:19:39.86:0,40,206	1/1:2,21:23:63.99:742,64,0	1/1:1,24:25:66.55:748,67,0	1/1:0,14:14:39.13:499,39,0	0/0:11,0:11:30.95:0,31,169	0/0:27,0:27:70.34:0,70,391	0/0:13,0:13:31.93:0,32,173	0/0:23,0:23:61.29:0,61,347	0/0:21,0:21:45.91:0,46,287	1/1:0,22:22:51.16:650,51,0	0/0:9,0:9:26.01:0,26,139
chr10	31021789	.	T	TTA	16190.15	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-7.888;DP=539;FS=0.000;HRun=0;HaplotypeScore=70.4404;InbreedingCoeff=0.9517;MQ=83.02;MQ0=0;MQRankSum=-3.296;QD=37.83;ReadPosRankSum=3.100;VQSLOD=7.0429;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,21:22:51.17:940,51,0	1/1:0,13:13:30.02:557,30,0	0/0:17,0:16:45.08:0,45,532	0/0:15,0:15:42.05:0,42,488	1/1:1,21:23:60.05:966,60,0	1/1:0,23:23:54.19:1005,54,0	1/1:2,11:16:32.86:498,33,0	1/1:3,25:30:78.50:1110,78,0	0/0:15,0:15:45.14:0,45,622	0/0:17,0:17:22.79:0,23,135	0/0:22,0:22:1.19:0,1,129	1/1:1,15:18:36.02:626,36,0	1/1:0,26:27:66.23:1229,66,0	1/1:0,19:20:48.16:892,48,0	0/0:25,0:25:72.22:0,72,996	1/1:0,11:11:30.10:559,30,0	1/1:0,20:21:54.19:1005,54,0	1/1:0,19:19:42.14:781,42,0	1/1:23,0:23:34.53:245,35,0	1/1:25,0:25:47.44:290,47,0	1/1:14,0:14:36.84:182,37,0	1/1:0,11:12:32.96:538,33,0	1/1:0,25:26:75.04:1281,75,0	1/1:0,13:13:33.11:614,33,0	1/1:0,23:24:63.22:1171,63,0	1/1:0,19:19:57.17:985,57,0	1/1:20,0:20:39.66:215,40,0	1/1:0,9:9:27.09:503,27,0
chr10	31024907	.	GTGT	G	797.95	PASS	AB=0.957;AC=7;AF=0.125;AN=56;BaseQRankSum=-0.444;DP=483;FS=5.110;HRun=0;HaplotypeScore=124.6370;InbreedingCoeff=0.7464;MQ=67.22;MQ0=6;MQRankSum=-2.413;QD=15.06;ReadPosRankSum=-0.145;VQSLOD=2.7977;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:31.70:0,32,525	0/0:12,0:12:29.12:0,29,468	0/0:20,0:12:21.49:0,21,221	0/1:21,0:12:2.43:2,0,123	0/0:23,0:22:45.09:0,45,664	0/0:22,0:21:42.04:0,42,668	0/0:13,0:13:18.01:0,18,290	0/0:20,0:20:48.03:0,48,634	0/0:18,0:18:47.90:0,48,779	1/1:13,6:19:44.94:596,45,0	1/1:6,3:9:21.07:320,21,0	0/0:24,0:24:63.09:0,63,895	0/0:15,0:15:10.63:0,11,193	0/0:14,0:14:25.74:0,26,337	0/0:19,0:19:54.15:0,54,938	0/0:19,0:19:44.75:0,45,667	0/0:17,0:14:20.99:0,21,316	0/0:16,0:15:23.94:0,24,343	0/0:22,0:19:51.07:0,51,612	0/0:23,0:23:63.13:0,63,819	0/0:2,0:2:3:0,3,25	0/0:11,0:11:29.89:0,30,406	0/0:14,0:14:27.03:0,27,403	1/1:2,0:2:1.55:4,2,0	0/0:34,0:34:93.05:0,93,1481	0/0:16,0:16:48.05:0,48,691	0/0:20,0:20:54.09:0,54,687	0/0:13,0:12:27.07:0,27,441
chr10	31024926	.	G	GT	792.20	PASS	AB=0.983;AC=19;AF=0.339;AN=56;BaseQRankSum=-1.977;DP=568;FS=9.438;HRun=12;HaplotypeScore=128.3210;InbreedingCoeff=-0.0096;MQ=53.29;MQ0=24;MQRankSum=0.354;QD=2.39;ReadPosRankSum=-1.933;VQSLOD=-0.1662;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:30:6.85:0,7,32	0/1:19,1:20:15.58:16,0,16	0/0:18,2:6:1.91:0,2,19	0/1:28,0:13:4.88:5,0,57	0/1:27,0:25:12.61:23,0,13	0/0:22,0:21:12.29:0,12,34	0/1:14,0:13:2.26:9,0,2	0/1:20,0:20:6.61:50,0,7	0/1:19,1:19:19.50:19,0,156	0/0:25,0:24:4.31:0,4,152	0/0:17,0:16:15.24:0,15,98	0/1:20,0:20:9.82:38,0,10	0/0:23,0:22:13.83:0,14,36	0/0:16,0:16:8.35:0,8,23	0/0:20,2:23:5.62:0,6,287	0/0:22,0:23:20.57:0,21,68	0/1:19,0:16:2.23:17,0,2	0/0:16,0:14:6.21:0,6,17	1/1:19,2:16:12.94:159,13,0	0/1:24,4:27:37.95:186,0,38	1/1:5,0:2:2.37:8,2,0	0/1:10,0:10:9.32:9,0,10	0/1:17,0:17:6.86:12,0,7	0/0:4,0:2:1.25:0,1,3	0/1:30,0:30:16.99:17,0,38	0/1:21,0:20:30.71:31,0,32	1/1:24,4:29:37.44:351,37,0	0/0:16,0:14:13.64:0,14,37
chr10	31024936	.	TTTG	T	6970.08	PASS	AB=0.962;AC=41;AF=0.732;AN=56;BaseQRankSum=-3.802;DP=560;FS=15.414;HRun=0;HaplotypeScore=117.7351;InbreedingCoeff=0.2780;MQ=48.42;MQ0=22;MQRankSum=1.672;QD=14.37;ReadPosRankSum=-1.199;VQSLOD=2.9596;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,23:31:44.57:547,45,0	1/1:3,17:20:29.20:390,29,0	0/1:18,0:5:27.66:28,0,28	0/0:28,0:10:5.98:0,6,171	1/1:10,17:25:38.89:433,39,0	1/1:7,13:19:25.84:324,26,0	1/1:6,7:12:17.17:173,17,0	1/1:4,17:21:46.26:529,46,0	0/0:18,0:17:37.40:0,37,512	0/1:22,0:21:60.10:60,0,103	0/1:17,0:16:46.25:60,0,46	1/1:19,0:19:45.03:467,45,0	1/1:23,1:23:26.79:314,27,0	1/1:6,10:16:17.80:201,18,0	0/0:24,0:24:67.76:0,68,846	0/1:14,8:21:29.87:345,0,30	1/1:15,3:15:27.09:365,27,0	1/1:3,12:14:12.04:164,12,0	0/1:24,0:19:41.80:72,0,42	0/1:23,0:21:31.48:31,0,138	0/0:5,0:2:2.92:0,3,17	1/1:11,2:13:26.61:285,27,0	1/1:7,12:19:20.69:240,21,0	1/1:4,0:2:5.97:50,6,0	1/1:18,9:27:66.66:808,67,0	1/1:7,15:21:53.99:705,54,0	0/1:33,0:30:41.53:42,0,141	1/1:6,10:14:26.71:338,27,0
chr10	31024937	.	TTG	T	5607.87	PASS	AB=1.000;AC=43;AF=0.768;AN=56;BaseQRankSum=0.052;DP=554;FS=10.754;HRun=0;HaplotypeScore=114.4938;InbreedingCoeff=0.4197;MQ=48.38;MQ0=21;MQRankSum=1.938;QD=11.68;ReadPosRankSum=0.378;VQSLOD=4.0480;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:28,3:30:44.12:373,44,0	1/1:20,0:20:31.12:241,31,0	0/1:19,0:5:27.94:28,0,29	0/0:28,0:10:17.93:0,18,166	1/1:27,0:25:38.63:294,39,0	1/1:20,0:19:29.84:236,30,0	1/1:13,0:12:17.84:147,18,0	1/1:20,0:20:45.93:393,46,0	0/0:18,0:17:37.98:0,38,398	0/1:22,0:21:58.42:58,0,119	0/1:16,0:15:44.44:48,0,44	1/1:19,0:19:45.39:418,45,0	1/1:24,0:23:27.04:287,27,0	1/1:16,0:16:17.97:164,18,0	0/0:23,0:23:59.18:0,59,585	0/1:22,0:21:16.87:321,0,17	1/1:18,1:16:26.94:234,27,0	1/1:15,0:14:11.99:103,12,0	1/1:22,0:18:26.40:155,26,0	0/1:23,0:21:42.93:131,0,43	0/0:5,0:2:1.14:0,1,14	1/1:5,8:13:26.84:223,27,0	1/1:18,0:18:20.96:195,21,0	1/1:4,0:2:5.97:48,6,0	1/1:26,0:26:70.50:606,71,0	1/1:22,0:21:52.21:458,52,0	1/1:32,1:30:26.94:187,27,0	1/1:15,1:14:27:259,27,0
chr10	31024938	.	TG	T	5196.77	PASS	AB=0.987;AC=46;AF=0.821;AN=56;BaseQRankSum=2.233;DP=539;FS=21.555;HRun=1;HaplotypeScore=106.2964;InbreedingCoeff=0.3986;MQ=47.43;MQ0=21;MQRankSum=0.931;QD=11.01;ReadPosRankSum=2.172;VQSLOD=1.7887;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:29,2:30:42.81:274,43,0	1/1:18,1:19:23.68:207,24,0	0/1:17,1:4:25.64:26,0,26	0/0:25,1:9:9.21:0,9,143	1/1:21,6:25:38.59:264,39,0	1/1:16,4:19:29.63:223,30,0	1/1:10,3:12:17.69:115,18,0	1/1:18,0:18:45.87:349,46,0	0/0:18,0:17:17.09:0,17,248	0/1:22,0:21:48.38:48,0,107	0/1:16,0:15:36.75:37,0,55	1/1:9,8:17:47.22:384,47,0	1/1:3,21:23:26.88:212,27,0	1/1:12,3:15:17.87:130,18,0	0/0:22,1:23:2.57:0,3,306	1/1:15,7:21:2.91:266,3,0	1/1:16,3:16:26.64:191,27,0	1/1:13,2:14:11.86:82,12,0	1/1:21,0:17:39.69:241,40,0	1/1:22,0:20:10.25:233,10,0	0/1:5,0:2:9.14:9,0,11	1/1:10,3:13:26.56:182,27,0	1/1:12,3:15:20.61:137,21,0	1/1:3,1:2:5.96:44,6,0	1/1:23,3:26:69.67:530,70,0	1/1:17,5:21:46.52:379,47,0	1/1:31,1:29:71.15:446,71,0	1/1:14,2:14:26.71:189,27,0
chr10	31024939	.	GTT	G	1081.53	PASS	AB=0.967;AC=36;AF=0.643;AN=56;BaseQRankSum=4.679;DP=546;FS=0.488;HRun=12;HaplotypeScore=128.7469;InbreedingCoeff=-0.1008;MQ=47.37;MQ0=22;MQRankSum=-1.127;QD=2.27;ReadPosRankSum=4.053;VQSLOD=-0.5044;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:31,0:29:9.69:56,10,0	0/1:20,0:20:12.79:13,0,21	0/1:17,0:4:12.14:12,0,48	0/0:27,0:10:18.12:0,18,231	1/1:27,0:25:13.40:37,13,0	1/1:20,0:19:3.07:31,3,0	0/1:14,0:13:17.46:17,0,18	0/1:19,0:19:15.36:20,0,15	0/0:18,0:17:47.36:0,47,617	0/1:23,0:22:24.14:24,0,134	0/1:18,0:17:23.18:23,0,63	0/1:15,0:15:12.39:76,0,12	1/1:24,0:23:21.92:102,22,0	1/1:15,0:15:11.54:46,12,0	0/0:24,0:24:71.96:0,72,1052	0/1:22,0:21:50.03:75,0,50	0/1:20,0:17:8.46:21,0,8	1/1:15,0:14:6.85:20,7,0	0/1:18,3:17:40.22:88,0,40	0/1:21,1:20:52.86:53,0,86	0/1:5,0:2:9.70:10,0,31	1/1:13,0:13:12.65:39,13,0	1/1:15,0:15:10.69:50,11,0	1/1:4,0:2:2.50:9,2,0	0/1:26,0:26:3.91:57,0,4	1/1:22,0:21:17.72:56,18,0	0/1:22,10:29:66.35:262,0,66	1/1:16,0:14:15.09:56,15,0
chr10	31024941	.	T	TG	831.71	PASS	AB=0.848;AC=5;AF=0.089;AN=56;BaseQRankSum=2.506;DP=556;FS=16.640;HRun=0;HaplotypeScore=127.1616;InbreedingCoeff=0.2950;MQ=47.34;MQ0=22;MQRankSum=-3.151;QD=10.27;ReadPosRankSum=0.818;VQSLOD=2.7317;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:29:43.84:0,44,277	0/0:20,0:20:35.48:0,35,250	0/0:18,0:3:7.97:0,8,61	0/0:28,0:10:13.36:0,13,198	0/0:27,0:25:29:0,29,177	0/0:20,0:20:28.94:0,29,174	0/0:14,0:13:17.65:0,18,116	0/0:21,0:21:38.83:0,39,255	0/0:21,0:21:47.43:0,47,520	0/0:22,0:21:47.87:0,48,281	0/0:17,0:16:26.78:0,27,161	0/0:15,0:15:37.89:0,38,234	0/0:23,0:22:26.55:0,27,174	0/0:18,0:18:26.62:0,27,189	0/0:25,0:25:70.46:0,70,885	0/0:22,0:21:41.26:0,41,319	0/0:20,0:17:29.57:0,30,196	0/0:15,0:14:11.57:0,12,66	0/1:19,3:17:39.69:195,0,40	0/1:15,5:19:40.72:232,0,41	0/1:5,0:3:16.81:17,0,36	0/0:14,0:14:20.58:0,21,134	0/0:15,0:15:17.06:0,17,112	0/0:4,0:2:5.71:0,6,32	0/0:25,0:25:65.19:0,65,428	0/0:22,0:21:40.89:0,41,252	1/1:25,6:29:47.25:511,47,0	0/0:14,0:14:26.59:0,27,180
chr10	31024947	.	TTG	T	793.83	PASS	AB=0.972;AC=18;AF=0.321;AN=56;BaseQRankSum=5.823;DP=547;FS=58.386;HRun=0;HaplotypeScore=123.3098;InbreedingCoeff=-0.1691;MQ=44.93;MQ0=30;MQRankSum=-5.592;QD=2.85;ReadPosRankSum=-2.185;VQSLOD=-0.0922;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:29:23.41:0,23,394	0/0:20,0:19:14.09:0,14,247	0/0:19,0:3:2.19:0,2,72	0/0:23,0:8:8.01:0,8,156	0/0:27,0:24:12.10:0,12,213	0/1:17,1:18:6.09:6,0,259	0/1:13,0:11:10.26:10,0,68	0/0:20,0:20:54.84:0,55,578	0/0:22,0:20:15.51:0,16,603	1/1:14,7:19:13.78:256,14,0	1/1:11,4:15:0.31:94,0,0	0/1:16,0:15:69.03:141,0,69	0/1:23,0:22:1.17:120,0,1	0/1:21,0:20:57.44:57,0,200	0/0:25,0:25:65.92:0,66,935	0/1:21,0:20:99:122,0,119	0/1:24,0:19:27.99:28,0,138	0/1:13,1:12:5.29:5,0,84	0/0:18,0:15:5.34:0,5,186	0/0:22,0:18:41.97:0,42,483	0/0:7,0:4:5.63:0,6,65	0/1:14,0:14:14.56:15,0,54	0/1:14,0:13:13.88:14,0,48	0/1:4,1:3:11.53:12,0,13	0/1:25,0:25:29.39:29,0,381	0/1:16,2:17:29.10:29,0,257	0/0:32,0:29:52.79:0,53,646	0/1:17,0:15:11.93:12,0,236
chr10	31024956	.	GGT	G	559.07	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=4.478;DP=536;FS=0.000;HRun=0;HaplotypeScore=116.1580;InbreedingCoeff=0.6386;MQ=40.56;MQ0=44;MQRankSum=-2.955;QD=12.42;ReadPosRankSum=-1.090;VQSLOD=3.2367;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:27:40.21:0,40,662	0/0:20,0:19:31.88:0,32,547	0/0:17,0:2:6.02:0,6,112	0/0:19,0:6:8.98:0,9,139	0/0:23,0:20:29.85:0,30,441	0/0:21,0:20:30.61:0,31,406	0/1:15,0:12:13.24:13,0,273	0/0:21,0:20:57.09:0,57,1035	0/0:19,0:16:48.12:0,48,878	1/1:6,9:12:32.55:387,33,0	1/1:2,13:15:28.60:286,29,0	0/0:15,0:14:11.47:0,11,211	0/0:28,0:28:21.56:0,22,301	0/0:23,0:20:15.73:0,16,370	0/0:26,0:26:72.19:0,72,1252	0/0:19,0:18:31.08:0,31,449	0/0:23,0:16:17.97:0,18,270	0/0:14,0:12:18.05:0,18,299	0/0:17,0:14:31.44:0,31,314	0/0:23,1:18:8.30:0,8,432	0/0:9,0:4:5.52:0,6,27	0/0:13,0:13:17.29:0,17,229	0/0:15,0:12:17.84:0,18,239	0/0:7,0:5:8.70:0,9,123	0/0:24,0:24:33.02:0,33,747	0/0:17,1:16:25.64:0,26,695	0/0:29,0:26:62.77:0,63,732	0/0:15,0:14:26.02:0,26,494
chr10	31024957	.	G	GTTT	1737.22	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=0.684;DP=537;FS=13.070;HRun=8;HaplotypeScore=122.1380;InbreedingCoeff=0.6979;MQ=40.63;MQ0=41;MQRankSum=-5.054;QD=18.29;ReadPosRankSum=1.810;VQSLOD=0.3359;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:28:32.92:0,33,425	0/0:19,0:18:27.08:0,27,354	0/0:17,0:2:6.02:0,6,73	0/0:17,0:6:9.03:0,9,112	0/0:23,0:20:21.04:0,21,273	0/0:21,0:20:17.97:0,18,233	0/0:14,0:12:6.34:0,6,185	0/0:21,0:20:48.14:0,48,630	0/0:19,0:16:42.04:0,42,524	0/0:15,0:12:1.73:0,2,48	0/1:14,0:15:7.54:8,0,59	0/0:16,0:15:18.77:0,19,211	0/0:28,0:28:33.04:0,33,370	0/0:23,0:20:32.72:0,33,344	0/0:26,0:26:54.11:0,54,679	0/0:18,0:18:25.04:0,25,266	0/0:23,0:16:12.02:0,12,156	0/0:14,0:12:18.06:0,18,226	1/1:8,9:17:36.12:653,36,0	1/1:11,11:19:33.10:577,33,0	1/1:6,2:4:3.01:61,3,0	0/0:12,0:12:12.02:0,12,155	0/0:16,0:13:11.99:0,12,140	0/0:7,0:5:9.03:0,9,105	0/0:25,0:25:38.67:0,39,471	0/0:18,0:16:36.10:0,36,462	1/1:16,8:26:38.89:591,39,0	0/0:15,0:14:27.07:0,27,340
chr10	31025920	.	ATTT	A	1727.25	PASS	AB=0.568;AC=9;AF=0.161;AN=56;BaseQRankSum=5.831;DP=489;FS=10.301;HRun=12;HaplotypeScore=77.0001;InbreedingCoeff=0.8576;MQ=72.70;MQ0=1;MQRankSum=-0.904;QD=19.19;ReadPosRankSum=1.946;VQSLOD=1.4509;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:27:75.26:0,75,1398	0/0:9,0:9:27.09:0,27,533	0/0:20,0:15:29.98:0,30,435	0/0:13,0:12:11.82:0,12,168	0/0:28,0:32:81.28:0,81,1475	0/0:14,0:15:39.13:0,39,727	0/0:9,0:9:24.08:0,24,473	0/0:29,0:32:78.19:0,78,1322	0/0:12,0:12:33.11:0,33,651	0/0:1,0:22:26.16:0,26,56	0/1:5,1:21:15.74:16,0,32	0/0:13,0:14:39.11:0,39,699	0/0:12,0:14:36.12:0,36,687	0/0:9,0:10:27.05:0,27,412	0/0:16,0:18:45.12:0,45,789	0/0:19,0:19:51.17:0,51,992	0/0:18,0:18:51.14:0,51,906	0/0:21,0:21:60.19:0,60,1113	1/1:0,15:16:40.67:512,41,0	1/1:3,17:20:45.10:569,45,0	1/1:4,10:14:24.06:303,24,0	0/0:15,0:15:36.12:0,36,703	0/0:24,0:24:66.18:0,66,1156	0/0:5,0:5:15.05:0,15,287	0/0:16,0:19:51.40:0,51,845	0/0:12,0:12:33.10:0,33,593	1/1:1,18:19:39.11:493,39,0	0/0:18,0:19:45.15:0,45,872
chr10	31026026	.	CA	C	1056.64	PASS	AB=0.795;AC=13;AF=0.232;AN=56;BaseQRankSum=5.771;DP=472;FS=0.000;HRun=14;HaplotypeScore=56.2858;InbreedingCoeff=0.3107;MQ=75.49;MQ0=0;MQRankSum=-0.505;QD=6.00;ReadPosRankSum=3.093;VQSLOD=2.1007;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:14,3:18:34.94:35,0,248	0/0:9,0:9:15.89:0,16,136	0/0:22,0:13:11.22:0,11,86	0/0:17,0:12:14.65:0,15,108	0/0:30,1:31:42.45:0,42,525	0/0:25,0:25:57.03:0,57,522	0/0:9,0:10:26.87:0,27,237	0/0:28,2:31:54.18:0,54,613	0/0:13,2:15:6.45:0,6,199	1/1:2,11:13:29.75:206,30,0	0/1:15,7:23:28.64:172,0,29	0/0:9,0:10:29.87:0,30,265	0/0:13,0:13:29.80:0,30,249	0/0:6,0:6:6.01:0,6,55	0/0:16,0:16:30:0,30,264	0/1:13,0:13:14.33:14,0,140	0/1:16,4:21:54.78:55,0,238	0/0:20,0:20:42.68:0,43,361	1/1:5,7:14:23.92:141,24,0	0/1:7,19:26:0.17:279,0,0	0/1:5,5:10:34.85:82,0,35	0/0:10,2:12:3.43:0,3,171	0/1:14,3:18:13.85:14,0,301	0/0:8,0:8:17.96:0,18,157	0/0:23,0:23:51.01:0,51,455	0/0:15,0:15:30.02:0,30,274	1/1:6,13:19:21.28:228,21,0	0/0:12,0:13:13.15:0,13,189
chr10	31026317	.	A	ACG	10795.74	PASS	AB=1.000;AC=40;AF=0.714;AN=56;BaseQRankSum=11.282;DP=744;FS=9.712;HRun=0;HaplotypeScore=152.1101;InbreedingCoeff=0.6186;MQ=68.14;MQ0=1;MQRankSum=-7.553;QD=18.65;ReadPosRankSum=10.033;VQSLOD=3.3564;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:39,0:39:60.17:672,60,0	1/1:7,2:9:15.05:210,15,0	0/0:33,0:27:62.76:0,63,725	0/0:42,0:39:99:0,102,1256	1/1:37,3:40:87.25:1031,87,0	1/1:22,0:21:39.58:437,40,0	1/1:24,1:25:42.12:490,42,0	1/1:21,0:21:31.05:357,31,0	0/0:26,0:26:75.22:0,75,1037	0/0:19,0:19:51.16:0,51,693	0/0:13,0:13:36.12:0,36,512	1/1:40,1:41:72.20:805,72,0	1/1:23,2:25:54.15:620,54,0	1/1:42,1:43:87.24:971,87,0	0/0:32,0:32:90.27:0,90,1247	1/1:21,0:21:20.20:445,20,0	1/1:43,0:42:90.25:1001,90,0	1/1:32,0:32:60.17:672,60,0	0/1:15,0:15:44.23:44,0,67	1/1:16,0:16:11.65:102,12,0	0/1:33,0:33:20.42:31,0,20	1/1:16,0:16:36.99:404,37,0	1/1:20,0:20:35.89:400,36,0	1/1:39,0:39:78.22:874,78,0	1/1:23,0:23:57.16:633,57,0	0/1:28,0:28:31.59:520,0,32	0/1:24,0:24:43.51:44,0,138	1/1:4,0:4:3.01:34,3,0
chr10	31026319	.	G	GCGCA	27136.87	PASS	AB=0.549;AC=40;AF=0.714;AN=56;BaseQRankSum=-12.036;DP=784;FS=11.454;HRun=0;HaplotypeScore=126.7131;InbreedingCoeff=0.6179;MQ=67.46;MQ0=1;MQRankSum=-5.549;QD=43.77;ReadPosRankSum=9.491;VQSLOD=3.4863;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,35:38:60.17:1674,60,0	1/1:2,7:9:14.88:284,15,0	0/0:31,0:25:59.61:0,60,970	0/0:42,0:39:78.51:0,79,1486	1/1:4,36:40:87.04:2220,87,0	1/1:1,24:25:42.13:1112,42,0	1/1:1,21:25:42.06:1104,42,0	1/1:1,18:23:63.01:1037,63,0	0/0:26,0:26:78.22:0,78,1446	0/0:20,0:20:54.17:0,54,984	0/0:13,0:13:36.12:0,36,681	1/1:2,37:40:72.25:2009,72,0	1/1:2,22:26:54.10:1430,54,0	1/1:3,42:48:87.29:2419,87,0	0/0:32,0:32:90.31:0,90,1712	1/1:2,20:22:20.23:1147,20,0	1/1:0,42:42:90.31:2505,90,0	1/1:0,31:36:60.08:1675,60,0	0/1:2,0:23:19.88:230,0,20	1/1:1,0:21:10.14:330,10,0	0/1:8,0:37:17.93:218,0,18	1/1:2,15:20:39.13:1031,39,0	1/1:0,20:22:35.48:1001,35,0	1/1:0,36:36:78.02:2177,78,0	1/1:0,24:25:57.20:1585,57,0	0/1:2,22:28:44.59:1484,0,45	0/1:8,0:25:99:379,0,128	1/1:3,3:7:3.01:84,3,0
chr10	31027372	.	T	TTAGTGTCCCCA	57143.85	PASS	AB=0.561;AC=39;AF=0.696;AN=56;BaseQRankSum=-10.768;DP=629;FS=0.993;HRun=0;HaplotypeScore=165.7597;InbreedingCoeff=0.9122;MQ=78.78;MQ0=0;MQRankSum=-19.005;QD=138.70;ReadPosRankSum=2.630;VQSLOD=5.3473;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,16:24:48.16:2759,48,0	1/1:8,9:16:48.16:2483,48,0	0/0:22,0:22:62.52:0,63,1664	0/0:22,0:22:57.15:0,57,1525	1/1:7,14:21:57.15:3046,57,0	1/1:2,12:14:39.13:2243,39,0	1/1:7,12:21:57.20:3092,57,0	1/1:15,7:26:75.22:3549,75,0	0/0:24,0:24:72.23:0,72,2497	1/1:5,21:29:84.27:4551,84,0	1/1:5,13:18:45.15:2375,45,0	1/1:4,15:22:57.20:3181,57,0	1/1:10,14:25:69.19:3623,69,0	1/1:6,20:30:78.27:4267,78,0	0/0:35,0:35:99:0,105,3796	0/1:7,22:32:95.74:4535,0,96	1/1:5,3:12:21.07:1135,21,0	1/1:3,9:15:30.10:1723,30,0	0/0:19,0:19:57.20:0,57,1915	0/0:27,0:27:81.28:0,81,2940	0/0:45,0:45:99:0,135,4673	1/1:6,5:12:33.07:1376,33,0	1/1:3,8:11:30.06:1547,30,0	1/1:5,8:16:33.11:1727,33,0	1/1:2,22:26:72.25:4158,72,0	1/1:5,23:31:93.30:5042,93,0	0/0:23,0:23:69.24:0,69,2493	1/1:2,3:8:15.05:733,15,0
chr10	31028858	.	C	CTGTGTG	297.74	PASS	AB=1.000;AC=9;AF=0.321;AN=28;BaseQRankSum=-2.596;DP=525;FS=9.773;HRun=0;HaplotypeScore=137.6577;InbreedingCoeff=0.4322;MQ=59.35;MQ0=29;MQRankSum=-0.207;QD=2.98;ReadPosRankSum=-1.677;VQSLOD=1.1186;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:32:1.82:0,2,5	./.	./.	./.	./.	./.	./.	./.	0/0:6,0:5:8.79:0,9,148	1/1:29,0:28:17.94:132,18,0	0/1:15,0:14:12.81:13,0,32	0/0:26,0:26:9.96:0,10,95	0/0:15,0:15:3.01:0,3,42	./.	0/0:12,7:18:0.47:0,0,1	0/0:11,0:11:5.23:0,5,48	0/0:27,0:26:6.01:0,6,68	./.	1/1:15,0:14:6.49:141,6,0	./.	1/1:27,0:25:5.99:70,6,0	./.	./.	0/0:23,0:18:0:0,0,0	./.	./.	1/1:14,0:14:4.37:50,4,0	0/0:8,0:8:3:0,3,25
chr10	31028881	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGC	T	3507.58	PASS	AB=1.000;AC=33;AF=0.611;AN=54;BaseQRankSum=3.525;DP=396;FS=4.140;HRun=0;HaplotypeScore=171.9343;InbreedingCoeff=0.5861;MQ=42.18;MQ0=38;MQRankSum=-0.884;QD=14.14;ReadPosRankSum=0.647;VQSLOD=2.3342;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:11,26:35:8.06:169,8,0	1/1:5,0:5:6.02:166,6,0	0/0:13,0:6:15.05:0,15,591	0/0:19,0:5:15.04:0,15,442	1/1:11,10:18:3.01:89,3,0	1/1:5,0:2:3:25,3,0	./.	1/1:4,0:4:3.01:75,3,0	0/0:8,0:7:9.92:0,10,1022	0/0:23,0:22:58.18:0,58,4124	0/0:11,0:11:15.05:0,15,861	1/1:7,17:24:11.89:903,12,0	1/1:8,8:15:3.01:240,3,0	1/1:8,0:7:6.01:95,6,0	0/0:16,0:15:14.21:0,14,933	1/1:2,3:6:6.02:456,6,0	1/1:10,16:25:12.04:752,12,0	0/1:11,0:10:15.01:70,0,15	0/0:14,0:12:34.35:0,34,1981	0/0:5,0:3:6.02:0,6,270	0/0:22,0:18:39.13:0,39,2813	1/1:13,0:11:0.47:1,0,0	1/1:4,6:10:3.01:89,3,0	1/1:15,0:10:3:25,3,0	1/1:12,9:18:3.48:92,3,0	1/1:11,0:10:2.95:20,3,0	0/0:10,0:10:27.09:0,27,1640	1/1:5,9:13:3.01:241,3,0
chr10	31032946	.	AGACG	A	11825.99	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=18.775;DP=555;FS=9.798;HRun=0;HaplotypeScore=170.9857;InbreedingCoeff=0.9965;MQ=83.58;MQ0=0;MQRankSum=-17.066;QD=36.50;ReadPosRankSum=3.069;VQSLOD=4.5908;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,20:27:54.10:740,54,0	1/1:0,6:6:18.06:257,18,0	0/0:23,0:23:66.21:0,66,1687	0/0:23,0:23:35.35:0,35,1420	1/1:3,20:23:54.18:772,54,0	1/1:3,23:26:72.24:1045,72,0	1/1:1,20:21:63.21:913,63,0	1/1:7,14:21:51.05:686,51,0	0/0:11,0:11:33.11:0,33,917	0/0:28,0:28:78:0,78,2131	0/0:20,0:20:57.20:0,57,1547	1/1:1,21:22:63.21:896,63,0	1/1:3,17:20:54.10:742,54,0	1/1:1,15:16:48.15:663,48,0	0/0:31,0:31:93.32:0,93,2598	1/1:8,20:28:63.13:872,63,0	1/1:1,14:15:42.06:577,42,0	1/1:1,6:7:18.06:263,18,0	0/0:18,0:18:45.15:0,45,1257	0/0:24,0:24:63.22:0,63,1703	0/0:21,0:21:63.20:0,63,1649	1/1:1,14:15:39.05:527,39,0	1/1:0,9:9:24.08:329,24,0	1/1:2,10:12:24.07:334,24,0	1/1:1,16:17:51.16:708,51,0	1/1:3,27:30:84.20:1193,84,0	0/0:32,0:32:93.32:0,93,2582	1/1:0,8:8:22.63:309,23,0
chr10	31032947	.	G	GT	3566.99	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=18.680;DP=531;FS=9.087;HRun=0;HaplotypeScore=165.6334;InbreedingCoeff=0.9910;MQ=84.36;MQ0=0;MQRankSum=-17.041;QD=11.62;ReadPosRankSum=2.749;VQSLOD=4.1378;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:20,4:23:48.74:244,49,0	1/1:6,0:6:16.20:67,16,0	0/0:24,0:24:66.19:0,66,880	0/0:21,0:21:14.17:0,14,694	1/1:20,3:23:47.23:209,47,0	1/1:23,2:25:64.74:289,65,0	1/1:20,1:21:56.63:265,57,0	1/1:14,3:17:48.24:320,48,0	0/0:11,0:11:33.11:0,33,458	0/0:27,0:27:77.85:0,78,1064	0/0:20,0:20:57.19:0,57,794	1/1:21,0:21:56.07:227,56,0	1/1:17,3:20:48.66:236,49,0	1/1:16,0:16:42.92:205,43,0	0/0:31,0:31:93.31:0,93,1300	1/1:20,5:25:56.64:266,57,0	1/1:14,1:15:38.09:194,38,0	1/1:6,0:6:16.54:73,17,0	0/0:16,0:16:45.15:0,45,629	0/0:22,0:22:63.18:0,63,845	0/0:21,0:21:63.18:0,63,844	1/1:14,1:15:34.90:175,35,0	1/1:9,0:9:18.97:74,19,0	1/1:11,0:11:20.67:79,21,0	1/1:17,0:17:45.77:198,46,0	1/1:27,1:28:75.43:363,75,0	0/0:31,0:31:93.31:0,93,1301	1/1:8,0:8:19.20:82,19,0
chr10	31032952	.	TTCC	T	10847.21	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=18.995;DP=529;FS=12.958;HRun=0;HaplotypeScore=160.0520;InbreedingCoeff=0.9966;MQ=85.57;MQ0=0;MQRankSum=-17.634;QD=36.90;ReadPosRankSum=3.661;VQSLOD=5.2505;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,20:21:51.17:656,51,0	1/1:0,6:6:18.06:233,18,0	0/0:25,0:25:71.46:0,71,1609	0/0:21,0:22:60.20:0,60,1320	1/1:1,20:21:54.17:706,54,0	1/1:3,23:26:75.24:988,75,0	1/1:2,20:22:66.22:878,66,0	1/1:0,14:14:42.14:569,42,0	0/0:12,0:12:36.12:0,36,875	0/0:30,0:30:87.19:0,87,2109	0/0:19,0:19:57.20:0,57,1385	1/1:1,21:22:66.21:858,66,0	1/1:2,17:19:57.19:748,57,0	1/1:0,15:15:45.15:579,45,0	0/0:32,0:32:96.33:0,96,2344	1/1:2,20:22:63.21:822,63,0	1/1:0,14:14:39.13:508,39,0	1/1:0,7:7:18.06:239,18,0	0/0:18,0:18:54.19:0,54,1316	0/0:24,0:24:72.20:0,72,1703	0/0:19,0:19:57.20:0,57,1392	1/1:0,14:14:36.12:462,36,0	1/1:0,9:9:24.07:297,24,0	1/1:1,10:11:23.35:301,23,0	1/1:0,16:16:48.16:619,48,0	1/1:0,27:27:81.26:1068,81,0	0/0:34,0:34:99:0,102,2438	1/1:0,8:8:24.08:315,24,0
chr10	31033268	.	G	GTGGTGC	4647.82	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-5.189;DP=583;FS=2.470;HRun=0;HaplotypeScore=143.8981;InbreedingCoeff=0.9601;MQ=68.67;MQ0=1;MQRankSum=-8.241;QD=37.18;ReadPosRankSum=-1.302;VQSLOD=4.1848;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:15.05:0,15,311	0/0:7,0:7:18.06:0,18,341	0/0:38,0:36:23.98:0,24,341	0/0:16,0:16:12.04:0,12,249	0/0:26,0:26:48.16:0,48,941	0/0:18,0:18:30.09:0,30,584	0/0:23,0:23:36.12:0,36,670	0/0:33,0:33:48.14:0,48,864	0/0:21,0:21:39.12:0,39,748	1/1:27,2:29:51.13:1008,51,0	1/1:13,5:18:30.10:776,30,0	0/0:20,0:20:39.13:0,39,770	0/0:21,0:21:18.06:0,18,373	0/0:17,0:17:21.07:0,21,423	0/0:22,0:22:42.14:0,42,862	0/0:22,0:22:24.08:0,24,492	0/0:25,0:25:45.15:0,45,882	0/0:21,0:22:39.13:0,39,772	1/1:8,8:17:39.07:867,39,0	1/1:11,11:24:30.10:979,30,0	1/1:15,0:15:15.05:358,15,0	0/0:14,0:14:27.08:0,27,513	0/0:15,0:15:26.85:0,27,510	0/0:23,0:23:48.10:0,48,870	0/0:23,0:23:27.01:0,27,550	0/0:25,0:25:41.82:0,42,857	1/1:12,8:21:21.07:659,21,0	0/0:8,0:8:6.02:0,6,125
chr10	31033309	.	TTTTG	T	5013.21	PASS	AB=0.920;AC=35;AF=0.625;AN=56;BaseQRankSum=4.403;DP=547;FS=2.181;HRun=0;HaplotypeScore=128.0011;InbreedingCoeff=0.8704;MQ=61.71;MQ0=7;MQRankSum=-1.398;QD=13.59;ReadPosRankSum=1.782;VQSLOD=4.3928;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:16:27.60:194,28,0	1/1:8,0:7:11.27:67,11,0	0/0:15,0:12:17.15:0,17,412	0/0:11,0:11:27.89:0,28,390	1/1:23,1:24:56.15:455,56,0	1/1:19,0:18:35.61:239,36,0	1/1:17,0:17:26.78:212,27,0	1/1:30,1:30:74.10:539,74,0	0/0:21,0:21:60.18:0,60,1329	0/0:17,0:17:0.36:0,0,178	0/0:20,0:20:51.95:0,52,411	1/1:25,0:25:56.41:392,56,0	1/1:16,1:16:26.65:201,27,0	1/1:17,1:18:29.67:232,30,0	0/0:19,0:19:54.17:0,54,1199	0/1:21,2:23:26.27:310,0,26	1/1:21,1:21:41.61:340,42,0	1/1:26,0:26:52.80:345,53,0	0/0:12,0:12:35.98:0,36,677	0/0:20,0:20:57.20:0,57,1387	0/0:17,0:17:42.12:0,42,926	1/1:15,0:13:34.99:225,35,0	1/1:22,0:22:29.22:190,29,0	1/1:18,0:17:31.44:203,31,0	1/1:34,0:34:65.05:427,65,0	1/1:26,1:24:41.87:384,42,0	0/0:26,0:26:66.21:0,66,1393	1/1:7,0:6:8.89:59,9,0
chr10	31033310	.	TTTG	T	11145.06	PASS	AB=0.774;AC=36;AF=0.643;AN=56;BaseQRankSum=3.439;DP=544;FS=3.363;HRun=0;HaplotypeScore=97.0263;InbreedingCoeff=0.8318;MQ=61.79;MQ0=7;MQRankSum=-0.602;QD=29.10;ReadPosRankSum=1.015;VQSLOD=4.9903;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,14:16:29.99:462,30,0	1/1:1,7:7:12.04:187,12,0	0/0:15,0:12:15.19:0,15,355	0/0:11,0:11:29.22:0,29,358	1/1:1,23:24:59.68:724,60,0	1/1:1,18:18:36.12:605,36,0	1/1:2,15:17:27.08:426,27,0	1/1:5,25:29:75.09:1063,75,0	0/0:22,0:22:63.17:0,63,1152	0/1:17,0:17:66.14:66,0,101	0/0:20,0:20:21.34:0,21,178	1/1:3,22:25:57.19:935,57,0	1/1:3,13:15:26.89:382,27,0	1/1:1,17:18:30.10:482,30,0	0/0:19,0:19:54.17:0,54,1025	0/1:4,19:23:12.91:656,0,13	1/1:4,18:21:42.13:659,42,0	1/1:1,25:26:54.14:860,54,0	0/0:13,0:13:38.98:0,39,605	0/0:20,0:20:57.20:0,57,1145	0/0:17,0:17:39.88:0,40,784	1/1:1,14:13:38.99:547,39,0	1/1:2,20:22:34.85:505,35,0	1/1:2,16:17:35.91:536,36,0	1/1:1,33:34:66.05:1034,66,0	1/1:3,23:23:63.88:866,64,0	0/0:24,0:24:66.22:0,66,1197	1/1:2,5:6:9.03:150,9,0
chr10	31033311	.	TTG	T	6983.61	PASS	AB=0.980;AC=37;AF=0.661;AN=56;BaseQRankSum=7.513;DP=539;FS=2.218;HRun=0;HaplotypeScore=101.2212;InbreedingCoeff=0.7806;MQ=62.57;MQ0=7;MQRankSum=-2.128;QD=17.59;ReadPosRankSum=1.387;VQSLOD=4.5836;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,1:16:30.04:295,30,0	1/1:8,0:7:11.89:100,12,0	0/0:16,0:13:21.08:0,21,338	0/0:10,0:10:29.11:0,29,339	1/1:24,0:24:59.57:471,60,0	1/1:18,0:17:36.06:342,36,0	1/1:17,0:17:26.71:236,27,0	1/1:29,0:28:74.94:664,75,0	0/0:23,0:23:66.15:0,66,970	0/1:15,1:16:59.27:154,0,59	0/1:20,0:20:61.99:121,0,62	1/1:23,1:24:57.05:530,57,0	1/1:15,1:15:26.83:227,27,0	1/1:18,0:18:30.04:280,30,0	0/0:20,0:20:57.16:0,57,876	0/1:23,0:23:0.79:363,0,1	1/1:20,2:21:41.73:382,42,0	1/1:25,0:25:53.91:489,54,0	0/0:12,0:12:36.05:0,36,516	0/0:20,0:20:57.19:0,57,913	0/0:17,0:17:47.13:0,47,681	1/1:15,0:13:38.80:329,39,0	1/1:21,1:22:35.62:330,36,0	1/1:16,2:17:36.07:375,36,0	1/1:33,0:33:66:600,66,0	1/1:25,1:23:66.01:608,66,0	0/0:24,0:24:66.22:0,66,1030	1/1:6,1:6:9.02:88,9,0
chr10	31033312	.	TG	T	6223.45	PASS	AB=0.585;AC=38;AF=0.679;AN=56;BaseQRankSum=8.039;DP=533;FS=1.704;HRun=1;HaplotypeScore=95.0940;InbreedingCoeff=0.8126;MQ=63.60;MQ0=7;MQRankSum=-2.113;QD=15.84;ReadPosRankSum=0.994;VQSLOD=4.9928;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:16:29.84:221,30,0	1/1:8,0:7:11.93:88,12,0	0/0:14,1:12:16.73:0,17,268	0/0:11,0:11:16.26:0,16,256	1/1:24,0:24:58.88:398,59,0	1/1:18,0:17:35.86:272,36,0	1/1:16,0:16:23.63:178,24,0	1/1:28,1:28:74.58:559,75,0	0/0:22,0:22:66.15:0,66,776	0/1:6,10:16:40:300,0,40	0/1:4,16:20:18.06:512,0,18	1/1:23,0:23:56.72:423,57,0	1/1:16,0:15:26.80:193,27,0	1/1:18,0:18:29.84:221,30,0	0/0:19,0:19:57.14:0,57,678	1/1:22,0:22:9.94:293,10,0	1/1:22,0:21:38.57:291,39,0	1/1:25,0:25:53.73:400,54,0	0/0:12,0:12:36.03:0,36,408	0/0:19,0:19:57.17:0,57,696	0/0:17,0:17:47.76:0,48,547	1/1:15,0:13:38.74:281,39,0	1/1:21,1:22:35.77:263,36,0	1/1:18,0:17:35.87:275,36,0	1/1:33,0:33:65.64:484,66,0	1/1:26,0:23:65.70:501,66,0	0/0:25,0:25:69.17:0,69,819	1/1:6,0:5:8.98:71,9,0
chr10	31034274	.	GCTCTCT	G	1741.93	PASS	AB=0.962;AC=29;AF=0.604;AN=48;BaseQRankSum=0.291;DP=537;FS=17.087;HRun=0;HaplotypeScore=130.0494;InbreedingCoeff=0.4708;MQ=64.95;MQ0=19;MQRankSum=2.584;QD=6.11;ReadPosRankSum=5.285;VQSLOD=0.4609;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:29,1:27:2.96:19,3,0	1/1:9,0:9:11.91:115,12,0	./.	./.	0/1:16,0:17:13.10:62,0,13	1/1:23,2:25:4.21:240,4,0	0/0:12,13:24:2.93:0,3,56	0/0:39,0:37:16.81:0,17,235	1/1:14,0:14:15.05:293,15,0	0/0:19,0:19:35.99:0,36,787	0/0:15,0:14:12.51:0,13,295	1/1:11,2:13:3.01:53,3,0	0/1:15,0:14:10.97:115,0,11	./.	0/1:13,0:13:73.46:86,0,73	1/1:21,1:22:2.55:41,3,0	1/1:16,0:15:20.05:128,20,0	1/1:11,0:9:10.97:118,11,0	0/0:22,0:21:13.60:0,14,202	0/0:21,0:19:3.47:0,3,26	./.	1/1:13,0:13:11.95:143,12,0	0/0:12,0:12:3.90:0,4,21	1/1:27,1:26:20.37:141,20,0	1/1:12,1:14:20.86:209,21,0	1/1:20,0:20:2.36:135,2,0	0/0:23,0:23:23.40:0,23,364	1/1:21,0:21:2.80:13,3,0
chr10	31034306	.	TCTCTCTCACACACACACACACACACA	T	4415.65	PASS	AB=0.992;AC=31;AF=0.620;AN=50;BaseQRankSum=2.417;DP=481;FS=7.440;HRun=0;HaplotypeScore=206.1845;InbreedingCoeff=0.0872;MQ=43.25;MQ0=30;MQRankSum=1.297;QD=11.29;ReadPosRankSum=0.324;VQSLOD=2.8286;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:32,0:26:23.70:24,0,255	1/1:9,0:9:17.33:319,17,0	./.	./.	0/1:20,0:18:12.97:174,0,13	1/1:26,0:26:2.99:606,3,0	0/1:27,0:23:8.95:9,0,177	0/1:15,0:12:50.11:50,0,215	1/1:19,0:18:14.64:249,15,0	0/0:17,0:16:48.16:0,48,2187	0/0:9,0:8:13.60:0,14,298	0/1:12,1:12:77.98:206,0,78	0/1:15,0:14:5.51:425,0,6	0/0:16,0:12:0.47:0,0,1	0/0:15,0:15:36.57:0,37,2219	1/1:13,13:24:4.85:303,5,0	1/1:21,0:20:25.26:438,25,0	0/1:12,0:9:2.59:105,0,3	0/1:8,0:8:24.01:24,0,336	0/0:14,0:12:4.41:0,4,27	./.	1/1:24,0:24:8.56:122,9,0	1/1:15,1:15:2.01:59,2,0	1/1:29,0:25:20.26:128,20,0	1/1:16,0:16:20.86:360,21,0	1/1:19,0:19:1.93:622,2,0	0/1:23,0:22:35.32:35,0,693	1/1:20,0:19:2.94:158,3,0
chr10	31034308	.	TCTCTCACACACACACACACACACA	T	5515.87	PASS	AB=0.898;AC=35;AF=0.700;AN=50;BaseQRankSum=-0.486;DP=468;FS=9.364;HRun=0;HaplotypeScore=193.5720;InbreedingCoeff=0.2452;MQ=43.46;MQ0=30;MQRankSum=1.783;QD=13.86;ReadPosRankSum=-0.536;VQSLOD=2.9378;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:13,18:25:68.69:69,0,248	1/1:10,0:9:17.20:368,17,0	./.	./.	1/1:7,13:18:3.44:145,3,0	1/1:25,0:25:39.11:837,39,0	0/1:27,0:23:31.40:31,0,154	0/1:13,0:10:57.89:58,0,118	1/1:18,0:17:17.59:198,18,0	0/0:17,0:16:48.06:0,48,1853	0/0:9,0:8:13.60:0,14,198	0/1:6,7:12:77.98:173,0,78	1/1:15,0:14:14.48:439,14,0	0/0:15,0:11:0.47:0,0,1	0/0:15,0:15:27.89:0,28,2052	1/1:25,1:24:4.95:289,5,0	1/1:21,0:20:29.72:606,30,0	1/1:12,0:9:11.96:167,12,0	0/1:8,0:8:24.52:25,0,220	0/1:12,0:10:0:0,0,1	./.	1/1:25,0:25:12.02:147,12,0	1/1:16,0:15:5.24:101,5,0	1/1:28,0:24:22.27:338,22,0	1/1:17,0:17:21.07:440,21,0	1/1:6,13:19:30.09:854,30,0	0/1:22,0:21:53.93:54,0,518	1/1:3,17:19:3.01:178,3,0
chr10	31034310	.	TCTCACACACACACACACACACA	T	4157.80	PASS	AB=0.957;AC=37;AF=0.740;AN=50;BaseQRankSum=1.192;DP=471;FS=4.469;HRun=0;HaplotypeScore=190.4118;InbreedingCoeff=0.1331;MQ=44.00;MQ0=32;MQRankSum=0.464;QD=9.69;ReadPosRankSum=-1.041;VQSLOD=2.5698;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:31,0:25:35.39:35,0,239	1/1:10,0:9:17.08:281,17,0	./.	./.	1/1:19,0:17:3.01:130,3,0	1/1:26,0:26:35.72:608,36,0	0/1:27,0:23:10.10:10,0,137	0/1:14,0:10:45.45:128,0,45	1/1:18,0:17:14.47:73,14,0	0/0:18,0:17:45.05:0,45,1589	0/0:9,0:8:13.54:0,14,103	0/1:13,0:12:77.98:159,0,78	1/1:14,0:13:14.35:374,14,0	0/1:6,10:12:0:0,0,0	0/1:15,0:15:8.47:8,0,1923	1/1:26,0:24:5.44:275,5,0	1/1:21,0:20:26.32:445,26,0	1/1:12,0:9:11.59:78,12,0	0/1:7,0:7:27.77:28,0,175	0/1:10,0:8:0:0,0,0	./.	1/1:26,0:26:11.27:63,11,0	1/1:6,10:15:2.49:123,2,0	1/1:29,0:25:21.73:163,22,0	1/1:17,0:17:20.78:284,21,0	1/1:19,0:19:31.21:676,31,0	0/1:23,0:22:56.92:57,0,486	1/1:20,0:19:3.01:159,3,0
chr10	31034312	.	TCACACACACACACACACACA	T	2888.37	PASS	AB=0.917;AC=31;AF=0.674;AN=46;BaseQRankSum=3.371;DP=473;FS=9.737;HRun=0;HaplotypeScore=184.2291;InbreedingCoeff=0.1706;MQ=43.88;MQ0=31;MQRankSum=-1.137;QD=8.07;ReadPosRankSum=-0.763;VQSLOD=1.5600;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:25:21.40:21,0,231	1/1:9,0:9:5.03:203,5,0	./.	./.	1/1:19,0:17:2.97:127,3,0	1/1:17,6:25:12.01:433,12,0	0/1:26,0:22:10.98:11,0,122	1/1:10,4:10:11.98:171,12,0	0/0:13,0:19:4.19:0,4,14	0/0:13,0:16:36.06:0,36,1278	0/0:7,0:8:1.55:0,2,4	0/1:13,0:12:77.98:145,0,78	1/1:10,4:13:5.44:316,5,0	./.	0/0:16,0:16:31.66:0,32,1948	1/1:25,0:24:6.02:262,6,0	1/1:15,5:19:5.96:312,6,0	0/0:12,0:10:2.04:0,2,6	0/1:7,0:9:25.20:25,0,382	./.	./.	1/1:14,12:26:0.88:2,1,0	1/1:14,0:14:2.80:93,3,0	1/1:21,10:26:3.49:22,3,0	1/1:11,7:18:3.01:150,3,0	1/1:18,0:19:11.97:511,12,0	0/1:17,0:21:65.85:66,0,367	1/1:20,0:19:3.01:159,3,0
chr10	31035232	.	ATG	A	9775.86	PASS	AC=46;AF=0.852;AN=54;BaseQRankSum=9.088;DP=580;FS=16.369;HRun=0;HaplotypeScore=158.7159;InbreedingCoeff=0.8998;MQ=71.78;MQ0=0;MQRankSum=-7.674;QD=18.95;ReadPosRankSum=5.362;VQSLOD=4.1650;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:39,0:39:66.14:678,66,0	1/1:11,0:11:18.04:184,18,0	0/0:22,0:19:33.08:0,33,530	0/0:15,0:15:39.13:0,39,645	1/1:16,1:17:27.06:280,27,0	1/1:20,0:20:21.05:214,21,0	1/1:29,0:29:39.09:397,39,0	1/1:32,0:32:75.20:864,75,0	0/0:12,0:12:30.10:0,30,521	1/1:8,2:9:18.06:236,18,0	1/1:0,6:6:5.87:56,6,0	1/1:31,0:31:48.07:494,48,0	1/1:21,1:23:56.80:581,57,0	1/1:28,0:28:54.11:545,54,0	0/0:15,0:15:42.60:0,43,710	1/1:29,0:29:63.13:638,63,0	1/1:37,0:37:75.43:737,75,0	1/1:29,0:29:51.11:520,51,0	1/1:4,0:4:11.87:114,12,0	1/1:6,0:6:9.03:102,9,0	1/1:19,0:19:44.85:523,45,0	1/1:24,0:24:45.09:457,45,0	1/1:10,0:10:9.02:91,9,0	1/1:34,0:34:62.45:649,62,0	1/1:31,0:31:54.11:547,54,0	1/1:24,3:27:75.18:802,75,0	1/1:20,0:20:5.97:68,6,0	./.
chr10	31035234	.	GTGT	G	5372.06	PASS	AB=1.000;AC=43;AF=0.796;AN=54;BaseQRankSum=11.497;DP=572;FS=4.979;HRun=0;HaplotypeScore=181.3025;InbreedingCoeff=0.6078;MQ=69.79;MQ0=0;MQRankSum=-6.351;QD=10.51;ReadPosRankSum=7.917;VQSLOD=3.3990;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:38,0:38:64.20:416,64,0	1/1:11,0:11:17.61:111,18,0	0/0:20,0:17:42.10:0,42,832	0/0:14,0:14:42.08:0,42,936	1/1:17,0:17:25.86:154,26,0	1/1:19,0:20:20.13:123,20,0	1/1:27,0:28:16.66:247,17,0	0/1:31,0:31:7.44:340,0,7	0/0:12,0:12:30.10:0,30,711	0/1:9,0:8:14.63:45,0,15	1/1:7,0:7:3.38:13,3,0	1/1:30,1:31:46.47:298,46,0	1/1:24,0:24:53.98:339,54,0	1/1:27,0:27:51.84:299,52,0	0/0:15,0:15:42.62:0,43,980	1/1:29,0:29:39.66:337,40,0	1/1:35,0:36:70.52:381,71,0	1/1:31,0:31:31.40:235,31,0	1/1:2,2:4:12.02:185,12,0	1/1:0,6:6:9.03:137,9,0	0/1:20,0:20:10.53:114,0,11	1/1:22,0:24:43.49:282,43,0	1/1:10,0:10:8.73:53,9,0	1/1:35,0:35:59.91:333,60,0	1/1:28,0:28:52.97:399,53,0	1/1:27,0:27:71.62:422,72,0	1/1:0,17:18:5.95:107,6,0	./.
chr10	31035235	.	TGTCC	T	17453.83	PASS	AB=0.905;AC=45;AF=0.833;AN=54;BaseQRankSum=6.339;DP=550;FS=10.389;HRun=0;HaplotypeScore=140.1591;InbreedingCoeff=0.7816;MQ=69.03;MQ0=0;MQRankSum=-7.282;QD=35.48;ReadPosRankSum=6.248;VQSLOD=4.3137;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,36:36:66.17:1316,66,0	1/1:0,11:11:18.05:375,18,0	0/0:18,0:15:33.09:0,33,703	0/0:14,0:14:42.14:0,42,850	1/1:1,15:16:27.09:532,27,0	1/1:1,19:20:21.01:437,21,0	1/1:1,25:26:39.09:812,39,0	1/1:0,25:27:78.26:1325,78,0	0/0:11,0:11:30.10:0,30,752	1/1:7,0:7:15.78:162,16,0	1/1:7,0:7:5.98:57,6,0	1/1:1,29:31:48.02:954,48,0	1/1:2,22:24:56.22:1123,56,0	1/1:0,26:26:54.17:1118,54,0	0/0:15,0:15:42.13:0,42,1007	1/1:0,25:28:63.17:1247,63,0	1/1:1,32:33:75.73:1535,76,0	1/1:0,26:28:51.15:1043,51,0	1/1:4,0:4:11.70:93,12,0	1/1:6,0:6:9.03:102,9,0	0/1:17,0:19:52.25:237,0,52	1/1:2,22:24:45.15:921,45,0	1/1:0,10:10:9.03:187,9,0	1/1:0,35:35:62.76:1304,63,0	1/1:1,26:28:54.17:1070,54,0	1/1:3,24:27:75.17:1436,75,0	1/1:18,0:18:5.92:68,6,0	./.
chr10	31036055	.	TTTC	T	5156.10	PASS	AB=0.904;AC=47;AF=0.839;AN=56;BaseQRankSum=-2.080;DP=537;FS=4.777;HRun=0;HaplotypeScore=78.5957;InbreedingCoeff=0.3793;MQ=50.45;MQ0=32;MQRankSum=3.126;QD=10.11;ReadPosRankSum=-1.680;VQSLOD=3.7213;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:30,2:31:59:427,59,0	1/1:11,0:9:26.76:197,27,0	0/1:44,0:10:8.47:8,0,89	0/1:45,0:10:7.08:24,0,7	1/1:20,0:19:20.73:137,21,0	0/1:1,13:13:0:0,0,0	1/1:12,1:11:5.93:40,6,0	1/1:30,0:28:70.46:473,70,0	0/0:11,0:10:13.88:0,14,138	0/1:15,0:14:99:116,0,101	0/1:19,0:17:44.33:44,0,107	1/1:10,0:10:17.78:128,18,0	1/1:10,0:10:26.81:201,27,0	1/1:15,0:15:32.37:250,32,0	0/0:16,0:15:32.49:0,32,373	1/1:13,0:13:32.83:275,33,0	1/1:29,0:22:41.34:284,41,0	1/1:31,0:28:56.38:432,56,0	1/1:31,0:26:45.16:317,45,0	1/1:12,1:12:5.48:75,5,0	1/1:16,0:14:25.83:157,26,0	1/1:2,0:2:2.97:20,3,0	1/1:10,0:9:8.10:52,8,0	1/1:11,0:11:12.81:111,13,0	1/1:18,1:19:50.36:418,50,0	1/1:20,0:20:58.34:442,58,0	1/1:22,1:23:44.07:265,44,0	1/1:13,1:11:29.86:261,30,0
chr10	31037195	.	TAAA	T	1531.55	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.021;DP=616;FS=1.407;HRun=5;HaplotypeScore=103.3855;InbreedingCoeff=0.9972;MQ=78.90;MQ0=0;MQRankSum=-2.240;QD=42.54;ReadPosRankSum=1.195;VQSLOD=2.7170;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:66.23:0,66,1491	0/0:12,0:12:33.10:0,33,719	0/0:15,0:15:42.13:0,42,906	0/0:20,0:20:57.06:0,57,1216	0/0:29,0:29:78.27:0,78,1784	0/0:31,0:31:87.29:0,87,1942	0/0:21,0:21:60.20:0,60,1341	0/0:43,0:43:99:0,126,2879	0/0:24,0:24:69.23:0,69,1499	1/1:1,25:25:71.75:1202,72,0	1/1:0,10:10:27.09:451,27,0	0/0:21,0:21:60.20:0,60,1313	0/0:16,0:16:48.15:0,48,1062	0/0:19,0:19:57.20:0,57,1295	0/0:26,0:26:69.24:0,69,1553	0/0:25,0:25:72.25:0,72,1639	0/0:26,0:26:78.27:0,78,1722	0/0:15,0:15:45.15:0,45,1010	0/0:25,0:25:69.24:0,69,1582	0/0:20,0:20:57.19:0,57,1239	0/0:27,0:27:78.26:0,78,1694	0/0:18,0:18:48.16:0,48,1107	0/0:27,0:27:78.22:0,78,1736	0/0:15,0:15:45.15:0,45,1027	0/0:19,0:19:57.20:0,57,1307	0/0:28,1:29:37.10:0,37,1803	0/0:28,0:28:84.28:0,84,1892	0/0:7,0:7:21.07:0,21,461
chr10	31039278	.	ATGTG	A	7731.55	PASS	AB=0.627;AC=38;AF=0.679;AN=56;BaseQRankSum=9.193;DP=737;FS=2.420;HRun=0;HaplotypeScore=133.1160;InbreedingCoeff=0.7635;MQ=67.22;MQ0=14;MQRankSum=2.126;QD=16.07;ReadPosRankSum=1.329;VQSLOD=4.3437;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:27,12:42:56.91:870,57,0	1/1:5,5:10:9.03:146,9,0	0/0:28,0:17:5.69:0,6,45	0/0:36,0:18:17.61:0,18,149	1/1:12,28:41:57.06:905,57,0	1/1:8,17:26:19.90:585,20,0	1/1:6,13:19:18.06:293,18,0	1/1:24,11:32:10.78:262,11,0	0/0:18,0:19:29.80:0,30,570	1/1:14,1:19:18.72:134,19,0	1/1:12,1:26:11.68:40,12,0	1/1:4,17:21:42.14:683,42,0	1/1:6,7:14:11.90:174,12,0	1/1:4,14:18:24.08:374,24,0	0/0:35,0:37:71.45:0,71,1166	1/1:10,27:38:45.62:712,46,0	1/1:8,12:20:12.04:195,12,0	0/1:8,10:18:26.88:288,0,27	0/0:21,0:21:38.79:0,39,562	0/0:28,1:29:17.02:0,17,984	0/0:54,0:58:93.17:0,93,1884	1/1:6,15:23:39.10:587,39,0	1/1:9,13:23:9.98:261,10,0	0/1:8,14:22:96.93:360,0,97	1/1:7,14:21:12.04:195,12,0	1/1:14,12:27:39.08:521,39,0	0/0:19,0:23:41.27:0,41,649	1/1:4,6:10:9.03:146,9,0
chr10	31039788	.	G	GT	1133.42	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-2.809;DP=683;FS=0.695;HRun=3;HaplotypeScore=66.6671;InbreedingCoeff=0.9990;MQ=66.39;MQ0=2;MQRankSum=-1.986;QD=29.83;ReadPosRankSum=1.332;VQSLOD=3.1732;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:45:99:0,120,1330	0/0:10,0:10:30.09:0,30,359	0/0:19,0:15:39.07:0,39,431	0/0:18,0:14:29.93:0,30,335	0/0:26,0:26:74.40:0,74,853	0/0:29,0:29:81.23:0,81,958	0/0:26,0:26:78.03:0,78,832	0/0:36,0:36:90.26:0,90,1059	0/0:30,0:30:84.24:0,84,995	1/1:2,21:22:60.20:836,60,0	1/1:0,15:15:30.10:419,30,0	0/0:30,0:30:84.26:0,84,1006	0/0:19,0:18:51.14:0,51,600	0/0:14,0:14:39.11:0,39,456	0/0:32,0:31:90.26:0,90,1064	0/0:28,0:28:81.18:0,81,934	0/0:21,0:21:48.14:0,48,565	0/0:14,0:14:33.07:0,33,371	0/0:26,0:26:66.13:0,66,744	0/0:24,0:24:66.18:0,66,779	0/0:39,0:39:99:0,117,1376	0/0:28,0:28:78.23:0,78,925	0/0:15,0:15:42.12:0,42,491	0/0:23,0:23:63.13:0,63,716	0/0:19,0:19:57.16:0,57,667	0/0:27,0:27:75.23:0,75,898	0/0:32,0:32:90.23:0,90,1041	0/0:14,0:14:42.13:0,42,503
chr10	31039942	.	GTTTT	G	7816.05	PASS	AB=0.644;AC=38;AF=0.679;AN=56;BaseQRankSum=3.158;DP=610;FS=4.269;HRun=16;HaplotypeScore=102.0272;InbreedingCoeff=0.8136;MQ=52.96;MQ0=23;MQRankSum=2.574;QD=18.01;ReadPosRankSum=7.302;VQSLOD=2.8692;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,29:37:12.04:761,12,0	1/1:8,9:16:3.41:255,3,0	0/0:29,0:4:6.49:0,6,99	0/0:30,0:11:15.11:0,15,201	1/1:5,18:24:41.61:474,42,0	1/1:4,22:27:60.76:783,61,0	1/1:7,8:17:25.14:301,25,0	1/1:7,8:15:15.92:177,16,0	0/0:10,0:9:21.03:0,21,387	0/1:5,1:14:4.41:154,0,4	1/1:5,1:8:5.87:63,6,0	1/1:9,9:19:31.11:379,31,0	1/1:8,17:23:29.90:393,30,0	0/1:10,6:19:1.67:195,0,2	0/0:16,0:22:39.12:0,39,723	1/1:10,13:26:41.23:496,41,0	1/1:9,17:28:45.67:561,46,0	1/1:12,13:21:27.34:539,27,0	0/0:16,0:18:35.78:0,36,459	0/0:22,0:23:41.99:0,42,580	0/0:7,0:9:20.93:0,21,267	1/1:7,12:19:11.49:264,11,0	1/1:9,12:21:29.80:365,30,0	1/1:9,19:29:50.40:618,50,0	1/1:9,11:20:19.82:271,20,0	1/1:9,15:23:47.79:581,48,0	0/0:23,0:29:59.93:0,60,983	1/1:5,4:7:17.23:188,17,0
chr10	31039955	.	TTTTC	T	2394.25	PASS	AB=0.990;AC=22;AF=0.393;AN=56;BaseQRankSum=11.110;DP=569;FS=16.108;HRun=0;HaplotypeScore=108.2261;InbreedingCoeff=-0.2248;MQ=48.49;MQ0=44;MQRankSum=1.161;QD=6.11;ReadPosRankSum=11.385;VQSLOD=-0.5044;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:36,1:36:94.63:317,0,95	1/1:10,0:9:20.04:111,20,0	0/0:23,0:3:6.48:0,6,91	0/0:23,0:7:14.91:0,15,178	0/1:27,1:27:77.14:115,0,77	0/1:28,0:28:27.14:247,0,27	1/1:13,0:12:4.22:97,4,0	0/1:10,0:9:38.68:56,0,39	0/0:14,0:12:36.03:0,36,536	0/0:12,0:12:7.11:0,7,122	0/1:7,0:6:10.77:20,0,11	0/1:22,1:20:74.69:126,0,75	0/1:21,0:18:14.60:146,0,15	0/1:14,1:13:36.60:92,0,37	0/0:20,0:19:45.14:0,45,827	0/1:20,0:20:19.81:145,0,20	0/1:29,0:28:36.77:161,0,37	0/1:28,0:20:34.54:182,0,35	0/0:16,0:13:34.32:0,34,510	0/0:20,0:18:44.88:0,45,638	0/0:13,0:12:26.94:0,27,348	0/1:21,0:20:84.22:84,0,150	0/1:19,0:18:9.82:118,0,10	1/1:25,0:24:22.36:238,22,0	0/1:19,0:16:34.33:92,0,34	0/1:27,0:22:47.63:174,0,48	0/0:35,0:34:87.04:0,87,1314	0/1:12,0:8:22.26:46,0,22
chr10	31040328	.	TAA	T	131.21	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=4.732;DP=513;FS=11.663;HRun=2;HaplotypeScore=61.6104;InbreedingCoeff=0.6885;MQ=65.88;MQ0=1;MQRankSum=-2.297;QD=26.24;ReadPosRankSum=-0.239;VQSLOD=1.1480;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,120,2182	0/0:6,0:6:18.06:0,18,313	0/0:7,0:4:0.02:0,0,92	0/0:9,0:7:2.62:0,3,102	0/0:32,0:32:90.31:0,90,1587	0/0:17,0:16:51.15:0,51,847	0/0:23,0:22:40.80:0,41,993	0/0:22,0:22:66.22:0,66,1163	0/0:22,0:22:66.23:0,66,1202	1/1:0,4:4:12.04:186,12,0	1/1:0,1:1:3.01:47,3,0	0/0:16,0:16:48.16:0,48,865	0/0:13,0:13:39.13:0,39,709	0/0:23,0:23:69.24:0,69,1259	0/0:12,0:12:36.12:0,36,660	0/0:15,0:15:45.14:0,45,791	0/0:16,0:16:48.16:0,48,870	0/0:36,0:36:99:0,102,1803	0/0:19,0:19:57.19:0,57,999	0/0:24,0:24:69.19:0,69,1202	0/0:5,0:5:15.05:0,15,275	0/0:17,0:17:51.11:0,51,813	0/0:20,0:20:60.19:0,60,1050	0/0:18,0:18:54.18:0,54,969	0/0:23,1:23:69.22:0,69,1218	0/0:24,0:23:69.24:0,69,1255	0/0:32,0:32:96.33:0,96,1730	0/0:16,0:16:48.16:0,48,844
chr10	31042746	.	ATAATAGTAGTAGTAGTAG	A	6411.68	PASS	AB=1.000;AC=25;AF=0.446;AN=56;BaseQRankSum=9.492;DP=592;FS=15.039;HRun=0;HaplotypeScore=339.8503;InbreedingCoeff=-0.2194;MQ=54.56;MQ0=6;MQRankSum=-3.725;QD=13.91;ReadPosRankSum=-0.567;VQSLOD=2.1098;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:20,0:20:99:162,0,245	0/1:8,0:8:84.28:84,0,142	0/0:16,0:11:27.05:0,27,284	0/0:10,0:7:14.73:0,15,122	0/1:47,0:47:99:806,0,208	0/1:12,0:12:99:393,0,145	0/0:9,0:9:20.87:0,21,166	0/0:29,0:29:59.89:0,60,511	0/0:25,0:25:54.06:0,54,907	0/1:19,0:18:53.49:53,0,462	0/1:18,0:18:3.68:4,0,265	0/1:14,0:14:99:281,0,188	0/1:19,0:19:99:486,0,238	0/1:22,0:22:99:257,0,375	0/0:30,0:30:75.08:0,75,1114	0/1:16,0:16:99:172,0,240	0/1:12,0:11:76.48:76,0,158	0/0:12,0:10:29.89:0,30,407	1/1:6,5:11:14.92:256,15,0	1/1:0,42:42:59.04:1119,59,0	1/1:22,0:22:35.88:285,36,0	0/1:32,0:31:99:155,0,233	0/1:24,0:24:99:275,0,249	0/1:15,0:15:99:187,0,151	0/1:29,0:29:99:561,0,428	0/1:36,0:36:99:253,0,374	1/1:2,31:33:12.51:471,13,0	0/1:10,0:10:75.29:75,0,176
chr10	31042749	.	ATAGTAGTAGTAGTAGTAGTAGTAGTAGTAGTAGTAG	A	11336.50	PASS	AB=0.929;AC=18;AF=0.333;AN=54;BaseQRankSum=10.360;DP=580;FS=5.305;HRun=0;HaplotypeScore=498.2068;InbreedingCoeff=-0.3105;MQ=52.15;MQ0=6;MQRankSum=-0.848;QD=32.48;ReadPosRankSum=-5.977;VQSLOD=0.3540;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:19,0:19:69.05:473,0,69	0/1:8,0:8:33.48:197,0,33	0/0:13,0:8:3:0,3,25	./.	1/1:29,18:47:29:2076,29,0	0/1:12,0:12:61.65:813,0,62	0/1:8,0:8:11.11:11,0,25	0/1:18,12:30:43.18:602,0,43	0/0:11,0:25:36.11:0,36,3010	0/0:14,0:18:39.12:0,39,2213	0/0:14,0:17:21.05:0,21,836	0/1:14,0:14:94.38:588,0,94	0/1:19,0:19:53.67:1021,0,54	0/1:22,0:22:79.89:593,0,80	0/0:22,0:33:48.10:0,48,3111	0/1:15,0:15:99:380,0,130	0/1:12,0:11:91.22:191,0,91	0/0:12,0:10:14.89:0,15,482	0/0:9,0:9:18.06:0,18,557	0/0:42,0:42:57.18:0,57,3436	0/0:22,0:22:24.04:0,24,1185	0/1:15,17:31:90.66:426,0,91	0/1:17,8:25:60.80:645,0,61	0/1:14,0:14:3.95:432,0,4	0/1:28,0:28:99:1352,0,102	0/1:22,12:34:99:1333,0,148	0/0:31,0:31:11.64:0,12,597	0/1:10,0:10:11.97:204,0,12
chr10	31042751	.	AGT	A	299.38	PASS	AB=0.861;AC=14;AF=0.250;AN=56;BaseQRankSum=10.654;DP=567;FS=4.689;HRun=0;HaplotypeScore=206.6641;InbreedingCoeff=-0.3328;MQ=52.05;MQ0=6;MQRankSum=-9.077;QD=1.02;ReadPosRankSum=1.947;VQSLOD=2.6097;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:16,3:19:46.99:47,0,160	0/1:5,1:6:1.79:2,0,77	0/0:13,0:8:24.08:0,24,302	0/0:7,0:5:15.03:0,15,176	0/1:32,14:46:91.06:91,0,114	0/1:8,4:12:38.61:39,0,118	0/0:8,0:8:20.42:0,20,139	0/0:29,0:29:55.27:0,55,350	0/0:25,0:25:34.72:0,35,433	0/0:17,2:18:5.55:0,6,139	0/0:15,2:17:7.77:0,8,145	0/1:9,3:12:35.59:36,0,143	0/1:14,5:19:61.31:61,0,196	0/1:19,3:22:17.07:17,0,237	0/0:33,0:33:70.32:0,70,864	0/0:13,2:15:4.45:0,4,207	0/1:12,1:12:11.14:11,0,145	0/0:12,0:10:29.54:0,30,227	0/0:9,0:9:8.25:0,8,179	0/1:42,0:42:4.82:5,0,263	0/0:21,0:21:36.56:0,37,422	0/0:30,2:31:15.10:0,15,199	0/1:20,3:23:28.43:28,0,165	0/1:12,2:14:47.53:51,0,48	0/1:21,7:28:35.76:36,0,280	0/0:31,3:34:4.16:0,4,298	0/1:31,0:31:17.43:17,0,24	0/1:5,1:6:2.70:3,0,78
chr10	31042754	.	AGTAGTAGTAGTAGTAGTAGTAGTAGTAGTAG	A	10577.58	PASS	AB=0.859;AC=16;AF=0.286;AN=56;BaseQRankSum=12.261;DP=555;FS=4.245;HRun=0;HaplotypeScore=428.3942;InbreedingCoeff=-0.4068;MQ=50.66;MQ0=8;MQRankSum=-3.569;QD=32.85;ReadPosRankSum=2.484;VQSLOD=1.5757;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:16,3:18:99:459,0,185	0/1:5,1:6:84.05:209,0,84	0/0:13,0:8:24.08:0,24,321	0/0:6,0:4:9.03:0,9,128	0/1:30,14:44:77.80:1891,0,78	0/1:8,4:12:99:873,0,110	0/0:8,0:8:19.91:0,20,133	0/1:29,0:29:99:102,0,311	0/0:25,0:25:54.18:0,54,2804	0/0:17,0:18:47.55:0,48,1802	0/0:14,0:16:35.67:0,36,709	0/1:9,3:12:99:626,0,161	0/1:13,5:18:99:1060,0,203	0/1:18,3:21:99:601,0,300	0/0:31,0:31:69.22:0,69,2938	0/1:12,2:14:99:402,0,247	0/1:12,1:12:99:195,0,176	0/0:13,0:10:29.96:0,30,613	0/0:9,0:9:24.08:0,24,546	0/0:42,0:42:60.19:0,60,2683	0/0:20,0:20:36.04:0,36,1144	0/1:30,2:31:99:382,0,278	0/1:20,3:23:99:682,0,198	0/1:11,2:13:60.49:466,0,60	0/1:19,7:26:99:1392,0,306	0/1:31,3:34:99:1033,0,260	0/0:31,0:31:11.64:0,12,398	0/1:5,1:6:99:205,0,113
chr10	31045276	.	T	TC	79.12	PASS	AB=0.815;AC=2;AF=0.037;AN=54;BaseQRankSum=-1.011;DP=424;FS=0.000;HRun=0;HaplotypeScore=76.0479;InbreedingCoeff=0.2864;MQ=64.51;MQ0=4;MQRankSum=1.742;QD=2.47;ReadPosRankSum=-0.719;VQSLOD=2.4022;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:37.29:0,37,310	0/0:9,0:9:24:0,24,213	0/0:13,0:10:20.50:0,21,213	0/0:10,0:6:7.35:0,7,51	0/0:24,0:24:56.96:0,57,511	0/0:12,0:12:29.97:0,30,281	0/0:10,0:10:24.03:0,24,230	0/0:33,0:31:52.52:0,53,424	0/0:12,0:12:23.92:0,24,220	0/1:7,9:16:30.39:84,0,30	0/1:15,0:11:1.09:83,0,1	0/0:12,0:12:23.88:0,24,199	0/0:12,0:12:29.99:0,30,262	0/0:14,0:14:20.88:0,21,165	0/0:10,0:9:20.24:0,20,185	0/0:15,0:15:36:0,36,335	0/0:28,0:27:56.75:0,57,502	0/0:18,0:17:35.93:0,36,317	0/0:18,0:18:43.90:0,44,388	0/0:17,0:17:46.96:0,47,453	0/0:11,0:10:27.01:0,27,264	./.	0/0:10,0:9:17.91:0,18,144	0/0:11,0:11:24.45:0,24,214	0/0:24,0:23:45.93:0,46,418	0/0:19,0:18:42:0,42,374	0/0:19,0:18:35.95:0,36,367	0/0:6,0:6:12:0,12,106
chr10	31046061	.	GTTTTGT	G	3548.81	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=11.029;DP=613;FS=2.485;HRun=0;HaplotypeScore=126.2087;InbreedingCoeff=0.9930;MQ=79.36;MQ0=0;MQRankSum=-9.269;QD=61.19;ReadPosRankSum=-1.214;VQSLOD=3.8309;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:99:0,99,3351	0/0:13,0:13:36.10:0,36,1091	0/0:21,0:20:60.07:0,60,1581	0/0:14,0:14:42.14:0,42,1400	0/0:33,0:33:99:0,99,3389	0/0:26,0:26:75.25:0,75,2456	0/0:9,0:9:27.09:0,27,832	0/0:35,0:35:99:0,99,3346	0/0:17,0:17:51.17:0,51,1781	1/1:0,30:30:81.28:1834,81,0	1/1:0,28:28:78.26:1715,78,0	0/0:13,0:13:39.13:0,39,1346	0/0:26,0:26:78.27:0,78,2684	0/0:26,0:26:78.25:0,78,2630	0/0:14,0:14:42.13:0,42,1335	0/0:29,0:29:87.30:0,87,3100	0/0:29,0:28:87.27:0,87,2960	0/0:17,0:17:51.13:0,51,1775	0/0:15,0:15:45.15:0,45,1387	0/0:24,0:24:72.24:0,72,2535	0/0:11,0:11:33.11:0,33,1158	0/0:19,0:19:57.20:0,57,2029	0/0:28,0:28:81.26:0,81,2817	0/0:6,0:6:18.06:0,18,660	0/0:20,0:20:60.19:0,60,2102	0/0:33,0:33:99:0,99,3366	0/0:37,0:37:99:0,111,3839	0/0:7,0:7:21.07:0,21,753
chr10	31046955	.	C	CA	22799.57	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-8.484;DP=736;FS=17.910;HRun=0;HaplotypeScore=75.6363;InbreedingCoeff=0.9821;MQ=81.12;MQ0=0;MQRankSum=-2.491;QD=43.59;ReadPosRankSum=2.395;VQSLOD=3.1327;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,57:57:99:2557,162,0	1/1:0,9:9:27.09:431,27,0	0/0:22,0:22:51.09:0,51,795	0/0:14,0:14:42.12:0,42,522	1/1:1,26:27:72.24:1140,72,0	1/1:0,18:18:48.16:765,48,0	1/1:1,32:33:87.30:1390,87,0	1/1:0,28:28:84.27:1319,84,0	0/0:23,0:23:69.23:0,69,965	1/1:2,28:30:87.24:1312,87,0	1/1:0,10:9:24.08:383,24,0	1/1:0,32:32:90.31:1438,90,0	1/1:2,31:33:84.28:1330,84,0	1/1:1,25:26:66.23:1054,66,0	0/0:42,0:42:99:0,123,1688	1/1:1,32:33:87.30:1390,87,0	1/1:0,28:28:81.28:1294,81,0	1/1:0,25:25:63.21:1007,63,0	0/0:23,0:23:69.21:0,69,941	0/0:26,0:26:78.25:0,78,1073	0/0:44,0:44:99:0,132,1810	1/1:0,20:20:51.17:815,51,0	1/1:0,15:15:45.15:719,45,0	1/1:0,43:43:99:1917,120,0	1/1:0,23:23:60.20:957,60,0	1/1:0,31:31:93.32:1485,93,0	0/0:19,0:19:54.15:0,54,720	1/1:0,2:2:6.02:96,6,0
chr10	31050831	.	GT	G	5326.79	PASS	AB=0.656;AC=39;AF=0.696;AN=56;BaseQRankSum=7.365;DP=428;FS=1.986;HRun=10;HaplotypeScore=41.2730;InbreedingCoeff=0.6290;MQ=54.91;MQ0=18;MQRankSum=-0.394;QD=17.07;ReadPosRankSum=1.404;VQSLOD=5.0115;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,12:14:35.99:312,36,0	1/1:1,3:3:6:52,6,0	0/1:5,1:4:11.56:19,0,12	0/0:6,0:3:8.67:0,9,60	1/1:1,18:18:44.98:391,45,0	1/1:3,22:25:65.89:559,66,0	0/1:3,10:12:33.33:201,0,33	1/1:10,21:26:62.92:534,63,0	0/0:11,1:12:0.96:0,1,216	1/1:2,0:8:15.15:44,15,0	1/1:4,0:14:1.76:6,2,0	1/1:1,11:12:29.99:260,30,0	1/1:3,11:13:32.99:286,33,0	1/1:1,12:12:29.92:252,30,0	0/0:16,0:15:42.11:0,42,465	1/1:2,16:17:41.95:358,42,0	1/1:0,17:17:47.99:417,48,0	1/1:3,9:12:26.99:234,27,0	0/0:19,0:18:41.16:0,41,449	0/0:14,1:16:21.88:0,22,437	0/0:17,0:17:45.12:0,45,498	1/1:1,2:3:3:26,3,0	0/1:2,10:11:9.19:158,0,9	1/1:4,5:9:14.99:130,15,0	1/1:4,17:21:47.99:417,48,0	1/1:7,13:19:7.60:305,8,0	0/0:29,0:28:61.87:0,62,798	1/1:1,14:15:41.99:365,42,0
chr10	31053314	.	GGCC	G	973.05	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.888;DP=647;FS=4.048;HRun=0;HaplotypeScore=93.2010;InbreedingCoeff=0.9992;MQ=85.34;MQ0=0;MQRankSum=-3.899;QD=40.54;ReadPosRankSum=1.461;VQSLOD=4.8090;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:96.26:0,96,2045	0/0:10,0:10:30.10:0,30,677	0/0:28,0:28:80.75:0,81,1573	0/0:34,0:33:83.53:0,84,1568	0/0:12,0:12:36.11:0,36,770	0/0:20,0:20:60.21:0,60,1357	0/0:33,0:33:99:0,99,2000	0/0:32,0:32:87.25:0,87,1864	0/0:17,0:17:48.15:0,48,1042	0/0:30,0:30:86.11:0,86,1843	0/0:17,0:17:48.13:0,48,1005	0/0:37,0:37:99:0,108,2445	0/0:20,0:20:57.18:0,57,1209	0/0:15,0:15:42.14:0,42,951	0/0:23,0:23:66.23:0,66,1451	1/1:0,24:24:66.17:1068,66,0	0/0:24,0:23:69.24:0,69,1555	0/0:20,0:20:51.18:0,51,1154	0/0:21,0:21:54.19:0,54,1174	0/0:15,0:15:42.08:0,42,878	0/0:43,0:43:99:0,126,2759	0/0:20,0:20:60.19:0,60,1302	0/0:17,0:17:45.15:0,45,976	0/0:21,0:21:60.21:0,60,1357	0/0:24,0:24:69.23:0,69,1466	0/0:15,0:15:39.13:0,39,866	0/0:25,0:25:75.18:0,75,1602	0/0:17,0:17:48.16:0,48,1085
chr10	31053672	.	C	CTT	10803.09	PASS	AB=0.976;AC=38;AF=0.679;AN=56;BaseQRankSum=9.174;DP=645;FS=1.887;HRun=1;HaplotypeScore=129.3084;InbreedingCoeff=0.7903;MQ=78.21;MQ0=4;MQRankSum=-3.211;QD=24.61;ReadPosRankSum=-0.186;VQSLOD=3.3697;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,15:26:35.94:575,36,0	1/1:3,4:8:21:273,21,0	0/1:45,0:29:44.10:44,0,597	0/0:38,0:26:3.99:0,4,360	1/1:3,18:25:35.76:718,36,0	1/1:5,12:21:31.33:391,31,0	1/1:3,12:18:47.98:629,48,0	1/1:16,14:33:71.80:905,72,0	0/0:19,0:19:57.19:0,57,856	0/1:19,0:20:48.87:49,0,114	0/0:20,0:21:5.76:0,6,167	1/1:2,13:20:40.77:498,41,0	1/1:4,9:15:29.51:380,30,0	1/1:2,11:14:39.06:554,39,0	0/0:29,0:29:81.27:0,81,1238	1/1:1,10:12:24.08:360,24,0	1/1:3,17:21:45.15:689,45,0	1/1:6,15:21:19.20:648,19,0	0/0:22,0:22:63.20:0,63,936	0/0:21,0:21:63.21:0,63,962	0/0:21,0:21:60.93:0,61,824	1/1:2,14:20:41.59:542,42,0	1/1:3,24:29:69:942,69,0	1/1:3,10:13:33.10:473,33,0	1/1:5,22:31:68.18:938,68,0	1/1:14,14:30:52.96:887,53,0	0/0:33,0:33:96.28:0,96,1404	1/1:1,10:15:23.93:309,24,0
chr10	31053673	.	TG	T	4538.11	PASS	AB=0.977;AC=38;AF=0.679;AN=56;BaseQRankSum=9.974;DP=646;FS=2.329;HRun=1;HaplotypeScore=135.5687;InbreedingCoeff=0.8009;MQ=78.09;MQ0=4;MQRankSum=-6.273;QD=10.99;ReadPosRankSum=-0.864;VQSLOD=2.6606;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:25,1:26:50.78:286,51,0	1/1:7,0:8:22.79:132,23,0	0/0:45,2:30:1.38:0,1,540	0/0:41,0:27:29.88:0,30,310	1/1:25,0:25:50.63:287,51,0	1/1:21,0:21:39.32:221,39,0	1/1:18,0:18:44.55:230,45,0	1/1:32,1:33:66.04:426,66,0	0/0:19,0:19:57.12:0,57,755	0/1:20,0:20:15.26:33,0,15	0/1:20,1:21:23.77:74,0,24	1/1:20,0:20:34.85:164,35,0	1/1:15,0:15:29.66:144,30,0	1/1:13,1:14:36.82:183,37,0	0/0:29,0:29:87.26:0,87,1176	1/1:12,0:12:24.98:135,25,0	1/1:21,0:21:46.95:255,47,0	1/1:22,0:21:36.55:189,37,0	0/0:22,0:22:63.63:0,64,809	0/0:21,0:21:63.18:0,63,843	0/0:21,0:21:63.07:0,63,777	1/1:19,0:19:43.10:233,43,0	1/1:26,0:26:65.30:343,65,0	1/1:14,0:14:34.66:189,35,0	1/1:31,0:31:70.53:375,71,0	1/1:30,1:31:73.59:455,74,0	0/0:33,0:33:95.94:0,96,1228	1/1:16,0:16:31.78:185,32,0
chr10	31054631	.	G	GTTTGT	12260.96	PASS	AB=1.000;AC=41;AF=0.732;AN=56;BaseQRankSum=7.696;DP=730;FS=14.613;HRun=0;HaplotypeScore=145.9336;InbreedingCoeff=0.8158;MQ=51.92;MQ0=15;MQRankSum=-8.991;QD=22.79;ReadPosRankSum=1.941;VQSLOD=3.9676;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,3:41:36.12:786,36,0	1/1:4,1:12:6.02:132,6,0	0/1:54,0:20:28.83:29,0,174	0/0:44,0:14:23.64:0,24,270	1/1:13,2:37:51.63:1018,52,0	1/1:8,2:24:21.06:462,21,0	1/1:8,1:19:9.02:198,9,0	1/1:18,1:25:29:405,29,0	0/0:22,0:22:45.15:0,45,784	1/1:8,22:32:72.24:1762,72,0	1/1:6,23:30:66.11:1431,66,0	1/1:3,0:18:27.09:591,27,0	1/1:9,0:26:33.11:690,33,0	1/1:5,1:22:21.07:461,21,0	0/0:30,0:30:81.22:0,81,1354	1/1:8,0:23:21.07:447,21,0	1/1:13,1:29:7.35:467,7,0	1/1:14,2:21:4.56:192,5,0	0/0:20,0:18:39.10:0,39,565	0/0:20,0:20:54.18:0,54,1028	0/0:22,0:22:57.18:0,57,965	1/1:7,0:16:24.08:525,24,0	1/1:6,1:18:15.05:304,15,0	1/1:8,0:16:5.75:78,6,0	1/1:9,0:24:27.09:593,27,0	1/1:10,0:37:75.22:1492,75,0	0/0:34,0:34:90.29:0,90,1651	1/1:4,0:6:9.03:198,9,0
chr10	31055656	.	T	TC	14159.24	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=3.564;DP=537;FS=3.910;HRun=0;HaplotypeScore=123.8215;InbreedingCoeff=0.9993;MQ=65.86;MQ0=1;MQRankSum=-9.733;QD=37.16;ReadPosRankSum=2.012;VQSLOD=4.3534;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,23:24:57.19:834,57,0	1/1:0,9:9:23.34:356,23,0	0/0:27,0:17:29.02:0,29,573	0/0:19,0:14:39.13:0,39,538	1/1:1,21:22:57.19:842,57,0	1/1:1,15:16:42.14:616,42,0	1/1:4,17:21:48.09:687,48,0	1/1:2,30:31:93.30:1364,93,0	0/0:15,0:15:45.15:0,45,629	1/1:0,25:25:72.18:1005,72,0	1/1:0,15:15:39.13:581,39,0	1/1:1,19:20:48.09:689,48,0	1/1:2,13:15:36.05:503,36,0	1/1:1,20:21:57.19:847,57,0	0/0:16,0:15:45.15:0,45,629	1/1:2,29:31:39.31:1091,39,0	1/1:0,20:20:48.16:713,48,0	1/1:0,12:12:30.10:447,30,0	0/0:17,0:16:42.13:0,42,570	0/0:20,0:20:57.17:0,57,764	0/0:20,0:20:54.18:0,54,754	1/1:3,11:14:32.95:422,33,0	1/1:1,17:18:38.75:525,39,0	1/1:2,15:17:42.06:593,42,0	1/1:1,16:17:48.16:714,48,0	1/1:3,12:15:42.12:591,42,0	0/0:21,0:19:60.18:0,60,797	1/1:1,16:17:51.16:739,51,0
chr10	31055684	.	T	TG	4669.01	PASS	AB=0.922;AC=33;AF=0.589;AN=56;BaseQRankSum=4.618;DP=629;FS=3.317;HRun=0;HaplotypeScore=177.3333;InbreedingCoeff=-0.0850;MQ=38.36;MQ0=79;MQRankSum=-4.382;QD=8.81;ReadPosRankSum=9.324;VQSLOD=3.8787;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:27,5:28:74.33:214,0,74	0/1:5,2:6:5.24:66,0,5	0/0:33,0:9:11.09:0,11,98	0/0:27,0:9:17.34:0,17,142	1/1:22,1:22:21.56:300,22,0	0/1:16,2:15:12.78:141,0,13	0/1:27,1:24:7.70:244,0,8	0/1:34,0:26:34.02:210,0,34	0/0:26,0:24:47.95:0,48,400	0/1:34,0:24:5.36:225,0,5	0/1:20,0:20:63:66,0,63	0/1:24,2:23:34.58:218,0,35	0/1:17,1:17:22.61:139,0,23	0/1:25,2:25:42.73:238,0,43	0/0:13,0:12:29.03:0,29,238	1/1:24,3:24:40.21:399,40,0	0/1:19,5:19:47.60:152,0,48	0/1:16,0:13:39.77:60,0,40	1/1:34,0:17:9.31:125,9,0	1/1:16,0:15:31.42:270,31,0	1/1:21,0:19:19.29:288,19,0	0/1:13,4:17:79.21:125,0,79	1/1:8,5:13:25.74:241,26,0	0/1:21,1:19:53.68:109,0,54	1/1:14,4:15:21.42:264,21,0	0/1:22,0:20:21.72:167,0,22	1/1:14,0:10:16.83:114,17,0	1/1:11,6:14:38.28:291,38,0
chr10	31055693	.	T	TG	609.78	PASS	AB=0.923;AC=23;AF=0.411;AN=56;BaseQRankSum=9.577;DP=685;FS=4.637;HRun=0;HaplotypeScore=185.9202;InbreedingCoeff=-0.0860;MQ=36.72;MQ0=107;MQRankSum=-3.240;QD=1.45;ReadPosRankSum=3.670;VQSLOD=2.4182;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:22,5:23:27.99:28,0,30	1/1:5,2:6:2.63:25,3,0	0/0:41,0:6:6.32:0,6,42	0/0:38,0:9:13:0,13,98	0/1:20,1:18:11.33:40,0,11	1/1:18,1:17:1.15:48,1,0	0/1:27,1:24:31.02:31,0,31	0/1:41,0:32:58.87:59,0,84	0/0:25,0:23:62.39:0,62,483	0/1:34,0:23:99:148,0,102	0/0:20,0:19:5.88:0,6,203	0/1:23,2:22:36.20:41,0,36	0/1:18,1:18:20.16:60,0,20	0/0:25,2:24:2.18:0,2,74	0/0:14,0:13:35.54:0,36,270	0/1:24,3:24:13.88:14,0,36	0/1:21,5:21:16.88:55,0,17	1/1:16,0:12:7.85:46,8,0	0/0:31,0:15:32.90:0,33,275	0/0:25,0:24:68.80:0,69,588	0/0:22,0:19:43.90:0,44,345	0/1:13,3:16:12.87:13,0,30	1/1:8,5:12:9.93:45,10,0	0/1:21,1:19:17.30:25,0,17	0/1:15,2:15:12.92:13,0,16	0/1:23,0:21:32.08:32,0,52	0/0:21,0:16:37.15:0,37,268	1/1:31,5:16:9.39:55,9,0
chr10	31055694	.	T	TG	3008.67	PASS	AB=0.958;AC=34;AF=0.607;AN=56;BaseQRankSum=12.638;DP=681;FS=8.922;HRun=0;HaplotypeScore=175.4234;InbreedingCoeff=0.8112;MQ=37.52;MQ0=108;MQRankSum=-4.875;QD=7.39;ReadPosRankSum=7.770;VQSLOD=2.4062;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:26,1:23:13.39:143,13,0	1/1:7,0:6:14.57:91,15,0	0/0:43,0:6:6.23:0,6,37	0/0:39,0:9:10.18:0,10,83	1/1:19,2:18:35.66:185,36,0	1/1:18,1:17:23.28:175,23,0	1/1:27,1:24:36.78:249,37,0	1/1:39,0:30:7.11:150,7,0	0/0:25,0:23:63.33:0,63,492	0/0:34,0:23:43.14:0,43,216	0/0:20,0:19:50.67:0,51,275	1/1:25,0:22:16.84:209,17,0	1/1:19,0:18:13.89:134,14,0	1/1:27,0:24:31.51:211,32,0	0/0:14,0:13:36.15:0,36,269	1/1:24,1:23:50.11:340,50,0	1/1:23,1:19:31.49:193,31,0	1/1:16,0:12:14.07:84,14,0	0/0:31,0:15:32.90:0,33,277	0/0:25,0:24:68.59:0,69,583	0/0:22,0:19:41.94:0,42,330	1/1:16,1:16:18.60:176,19,0	1/1:13,0:12:28.81:185,29,0	0/1:20,2:19:9.64:74,0,10	1/1:17,0:14:30.77:212,31,0	0/1:22,0:20:16.16:138,0,16	0/0:21,0:16:40.51:0,41,290	1/1:37,0:16:30.85:275,31,0
chr10	31055696	.	T	TGTTTG	8047.42	PASS	AB=0.938;AC=34;AF=0.607;AN=56;BaseQRankSum=11.698;DP=682;FS=3.730;HRun=0;HaplotypeScore=196.2976;InbreedingCoeff=0.6444;MQ=36.51;MQ0=108;MQRankSum=-7.380;QD=18.12;ReadPosRankSum=9.443;VQSLOD=3.4025;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:21,5:22:28.13:478,28,0	1/1:5,2:6:17.33:243,17,0	0/0:42,0:5:4.88:0,5,77	0/0:39,0:10:21.12:0,21,134	1/1:22,1:20:20.89:401,21,0	1/1:19,1:17:46.38:517,46,0	1/1:28,1:25:56.60:618,57,0	0/1:36,0:27:34.13:464,0,34	0/0:24,0:22:62.52:0,63,901	0/1:33,0:22:21.53:22,0,239	0/0:20,0:19:27.62:0,28,436	1/1:23,2:22:30.15:467,30,0	1/1:17,1:18:3.33:360,3,0	1/1:24,2:24:32.03:504,32,0	0/0:14,0:13:38.65:0,39,565	1/1:23,3:23:56.25:595,56,0	1/1:19,5:20:50.92:664,51,0	1/1:18,0:14:29.72:357,30,0	0/0:31,0:15:36.09:0,36,559	0/0:25,0:24:69.17:0,69,1108	0/0:21,0:18:44.45:0,44,487	1/1:16,3:18:45.09:523,45,0	0/1:8,4:11:11.79:350,0,12	1/1:19,1:18:34.24:560,34,0	1/1:15,2:14:28.19:301,28,0	0/1:21,0:19:44.41:189,0,44	0/0:21,0:16:45.08:0,45,598	1/1:35,4:19:5.12:435,5,0
chr10	31055697	.	T	TG	749.80	PASS	AB=0.979;AC=26;AF=0.464;AN=56;BaseQRankSum=12.812;DP=676;FS=12.811;HRun=0;HaplotypeScore=178.0037;InbreedingCoeff=0.2770;MQ=36.49;MQ0=107;MQRankSum=-6.183;QD=1.84;ReadPosRankSum=8.538;VQSLOD=0.3581;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:25,1:22:0.69:42,0,1	1/1:7,0:6:7.37:33,7,0	0/0:41,0:5:5.74:0,6,45	0/0:40,0:10:0.64:0,1,47	1/1:20,2:19:10.71:79,11,0	1/1:18,1:16:15:70,15,0	1/1:28,1:25:5.95:72,6,0	0/1:37,0:28:46.55:47,0,66	0/0:24,0:22:61.58:0,62,468	0/0:33,0:22:25.62:0,26,190	0/0:20,0:19:48.93:0,49,286	0/1:25,0:22:4.50:45,0,4	1/1:19,0:18:9.82:66,10,0	0/1:26,0:23:18.88:19,0,27	0/0:14,0:13:38.40:0,38,296	1/1:24,1:22:20.84:85,21,0	0/1:24,1:20:4.47:69,0,4	1/1:17,1:14:9.24:54,9,0	0/0:31,0:16:38.89:0,39,322	0/0:25,0:24:68.93:0,69,603	0/0:20,0:17:38.16:0,38,292	0/1:18,1:18:15.40:74,0,15	0/1:11,0:10:3.51:33,0,4	0/1:19,2:18:3.54:25,0,4	1/1:17,0:14:0.46:31,0,0	0/1:21,0:19:38.88:39,0,49	0/0:21,0:16:44.06:0,44,325	0/1:40,0:19:11.50:48,0,12
chr10	31055700	.	T	TG	2161.03	PASS	AB=0.970;AC=25;AF=0.446;AN=56;BaseQRankSum=7.434;DP=676;FS=1.691;HRun=0;HaplotypeScore=169.2006;InbreedingCoeff=0.2322;MQ=38.20;MQ0=102;MQRankSum=-2.308;QD=5.23;ReadPosRankSum=7.973;VQSLOD=2.8964;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:27,1:24:2.78:161,3,0	1/1:8,0:7:8.43:73,8,0	0/0:40,0:6:5.92:0,6,32	0/0:43,0:10:13.55:0,14,87	0/1:22,0:20:4.23:107,0,4	0/1:19,1:19:2.17:170,0,2	1/1:29,0:26:24.54:243,25,0	0/1:36,0:28:28.90:207,0,29	0/0:25,0:23:64.54:0,65,485	0/0:29,0:19:1.96:0,2,141	0/0:19,0:18:43.36:0,43,268	0/1:25,0:22:19.86:118,0,20	0/1:19,0:18:8.50:97,0,9	0/1:25,0:23:24.15:122,0,24	0/0:14,0:13:38.44:0,38,297	1/1:23,1:21:22.01:169,22,0	1/1:24,1:20:5.35:161,5,0	1/1:17,0:14:22.40:142,22,0	0/0:30,0:16:41.87:0,42,342	0/0:25,0:24:68.45:0,68,571	0/0:17,0:14:26.94:0,27,227	0/1:19,0:19:0.82:137,0,1	0/1:10,0:10:1.40:91,0,1	1/1:20,2:19:9.22:160,9,0	0/1:21,0:18:14.44:46,0,14	0/1:18,0:16:20.79:45,0,21	0/0:21,0:16:47.51:0,48,359	0/1:37,0:16:15.09:91,0,15
chr10	31056182	.	A	AT	3921.49	PASS	AB=1.000;AC=41;AF=0.732;AN=56;BaseQRankSum=10.689;DP=370;FS=4.564;HRun=0;HaplotypeScore=131.3529;InbreedingCoeff=0.8016;MQ=69.76;MQ0=21;MQRankSum=-4.943;QD=17.20;ReadPosRankSum=0.853;VQSLOD=5.8157;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,2:15:21.31:382,21,0	1/1:2,0:2:6.02:78,6,0	0/0:31,0:15:21.39:0,21,192	0/1:40,0:20:4.74:5,0,246	1/1:7,3:10:5.99:78,6,0	1/1:10,2:10:24.07:316,24,0	1/1:6,2:6:15.05:194,15,0	1/1:10,4:14:39.10:504,39,0	0/0:11,0:11:27:0,27,326	1/1:9,4:12:30.52:372,31,0	1/1:7,2:6:2.97:39,3,0	1/1:5,1:5:9.01:118,9,0	1/1:6,0:5:15.05:197,15,0	1/1:8,0:6:18.05:224,18,0	0/0:21,0:21:57.85:0,58,669	1/1:5,2:6:9.01:119,9,0	1/1:6,2:5:7.25:81,7,0	1/1:8,2:9:12:152,12,0	0/0:27,0:26:71.75:0,72,819	0/0:16,0:15:35.87:0,36,387	0/0:11,0:11:18.06:0,18,250	1/1:7,2:9:9:116,9,0	1/1:10,0:9:18.02:217,18,0	1/1:14,4:14:17.83:234,18,0	1/1:8,0:8:12.01:158,12,0	1/1:4,2:4:12.03:143,12,0	0/0:25,0:25:68.16:0,68,778	1/1:4,4:8:15.04:196,15,0
chr10	31058305	.	CG	C	15542.37	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=12.049;DP=723;FS=5.248;HRun=2;HaplotypeScore=75.6365;InbreedingCoeff=0.9988;MQ=84.18;MQ0=0;MQRankSum=-4.404;QD=34.01;ReadPosRankSum=3.191;VQSLOD=5.2883;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,60:61:99:1824,141,0	1/1:0,15:15:42.14:544,42,0	0/0:25,0:25:72.20:0,72,985	0/0:20,0:20:60.10:0,60,861	1/1:0,24:24:69.22:892,69,0	1/1:0,14:14:39.13:506,39,0	1/1:1,26:27:63.20:817,63,0	1/1:2,33:35:93.22:1121,93,0	0/0:23,0:23:69.22:0,69,1012	0/0:31,0:31:93.30:0,93,1353	0/0:15,0:15:45.14:0,45,654	1/1:0,35:35:99:1361,105,0	1/1:0,28:28:75.24:970,75,0	1/1:0,25:25:66.21:855,66,0	0/0:27,0:27:78.20:0,78,1105	1/1:1,23:24:69.22:895,69,0	1/1:0,31:31:78.25:1011,78,0	1/1:1,24:25:57.19:739,57,0	0/0:22,0:22:66.20:0,66,941	0/0:17,0:17:45.14:0,45,653	0/0:56,0:56:99:0,165,2421	1/1:0,14:14:36.12:466,36,0	1/1:0,16:16:48.16:621,48,0	1/1:0,29:29:72.23:933,72,0	1/1:0,17:17:48.16:622,48,0	1/1:0,30:30:90.17:1130,90,0	0/0:30,0:30:90.24:0,90,1296	1/1:0,7:7:18.06:233,18,0
chr10	31058383	.	ATGG	A	379.53	PASS	AB=0.586;AC=2;AF=0.036;AN=56;BaseQRankSum=6.752;DP=762;FS=4.751;HRun=0;HaplotypeScore=163.6909;InbreedingCoeff=-0.0419;MQ=90.55;MQ0=0;MQRankSum=-5.666;QD=13.09;ReadPosRankSum=-0.277;VQSLOD=2.7736;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:65,0:65:99:0,156,2688	0/0:12,0:12:34.93:0,35,558	0/0:36,0:36:99:0,105,2332	0/0:25,0:25:63.17:0,63,1468	0/0:19,0:19:3.78:0,4,707	0/0:23,0:23:42.23:0,42,1007	0/0:36,0:36:54.15:0,54,1480	0/0:28,0:28:83.65:0,84,1328	0/0:24,0:24:72.19:0,72,1665	0/1:5,14:20:28.37:396,0,28	0/1:3,6:9:30.82:72,0,31	0/0:42,0:42:99:0,125,2003	0/0:26,0:26:44.23:0,44,1074	0/0:35,0:35:96.33:0,96,1524	0/0:24,0:24:69.24:0,69,1701	0/0:30,0:30:86.10:0,86,1359	0/0:31,0:31:41.86:0,42,1282	0/0:25,0:25:69.24:0,69,1140	0/0:12,0:12:36.11:0,36,810	0/0:18,0:18:51.18:0,51,1255	0/0:51,0:50:99:0,150,3596	0/0:22,0:22:65.42:0,65,1010	0/0:22,0:22:58.44:0,58,942	0/0:39,0:39:99:0,102,1655	0/0:20,0:20:59.01:0,59,923	0/0:28,0:28:81.24:0,81,1234	0/0:36,0:35:99:0,108,2662	0/0:4,0:4:12.04:0,12,203
chr10	31058387	.	CTCCGTAGGGACT	C	1658.48	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.737;DP=758;FS=0.000;HRun=0;HaplotypeScore=296.0296;InbreedingCoeff=0.9638;MQ=92.08;MQ0=0;MQRankSum=-6.844;QD=72.11;ReadPosRankSum=2.355;VQSLOD=3.0023;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:62,0:62:99:0,172,9179	0/0:12,0:12:36.12:0,36,2107	0/0:36,0:36:99:0,108,5400	0/0:28,0:28:81.26:0,81,3633	0/0:18,0:18:48.16:0,48,2657	0/0:23,0:23:66.20:0,66,3325	0/0:34,0:34:99:0,102,5905	0/0:28,0:28:84.28:0,84,4590	0/0:23,0:23:69.22:0,69,4055	1/1:2,14:16:48.12:1421,48,0	1/1:1,6:7:10.97:353,11,0	0/0:42,0:42:99:0,126,7280	0/0:25,0:25:69.24:0,69,4276	0/0:38,0:38:99:0,105,6417	0/0:23,0:23:69.22:0,69,3693	0/0:29,0:29:87.28:0,87,5001	0/0:29,0:29:84.29:0,84,4909	0/0:26,0:26:72.25:0,72,4149	0/0:10,0:10:30.10:0,30,1520	0/0:18,0:18:51.16:0,51,2955	0/0:52,0:51:99:0,153,8743	0/0:25,0:25:72.25:0,72,3718	0/0:24,0:24:63.22:0,63,2982	0/0:41,0:41:99:0,111,6616	0/0:19,0:19:57.16:0,57,2996	0/0:29,0:29:87.30:0,87,4954	0/0:37,0:36:99:0,111,6207	0/0:4,0:4:12.04:0,12,641
chr10	31059043	.	G	GC	8156.12	PASS	AB=1.000;AC=41;AF=0.732;AN=56;BaseQRankSum=-9.014;DP=539;FS=0.000;HRun=9;HaplotypeScore=60.9139;InbreedingCoeff=0.8817;MQ=79.60;MQ0=0;MQRankSum=-1.910;QD=20.04;ReadPosRankSum=0.211;VQSLOD=4.9890;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,25:35:51.14:565,51,0	1/1:2,8:10:18.03:190,18,0	0/0:17,0:17:29.07:0,29,224	0/1:11,0:11:17.19:17,0,34	1/1:1,12:13:33.09:365,33,0	1/1:10,16:27:39.09:430,39,0	1/1:5,18:23:51.14:564,51,0	1/1:12,21:33:48.10:514,48,0	0/0:20,0:20:53.94:0,54,459	1/1:4,16:20:42.07:445,42,0	1/1:4,10:14:27.07:299,27,0	1/1:4,17:21:6.62:306,7,0	1/1:6,21:27:50.98:562,51,0	1/1:4,13:17:23.62:260,24,0	0/0:19,0:19:47.97:0,48,412	1/1:1,17:18:39.11:431,39,0	1/1:4,29:33:38.13:873,38,0	1/1:3,15:18:39.11:431,39,0	0/0:15,0:15:38.98:0,39,339	0/0:14,0:14:29.94:0,30,260	0/0:35,0:34:95.97:0,96,833	1/1:2,5:7:9.50:100,9,0	1/1:1,12:13:30.08:331,30,0	1/1:4,18:22:48.13:531,48,0	1/1:3,14:17:16.06:405,16,0	1/1:7,8:15:23.93:247,24,0	0/0:12,0:12:32.97:0,33,282	1/1:3,10:13:27.06:289,27,0
chr10	31059594	.	C	CTGTG	17941.71	PASS	AB=1.000;AC=37;AF=0.661;AN=56;BaseQRankSum=7.234;DP=627;FS=0.354;HRun=0;HaplotypeScore=140.1948;InbreedingCoeff=0.9170;MQ=60.58;MQ0=0;MQRankSum=-6.568;QD=40.78;ReadPosRankSum=-0.520;VQSLOD=5.0962;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,21:26:41.88:980,42,0	1/1:2,18:22:45.12:1064,45,0	0/0:16,0:10:6.60:0,7,319	0/0:8,0:7:14.25:0,14,182	1/1:4,23:29:53.21:1188,53,0	1/1:5,16:25:48.13:1137,48,0	1/1:9,3:13:18.04:350,18,0	1/1:23,22:46:81.15:1662,81,0	0/0:18,0:18:54.19:0,54,1017	0/0:33,0:33:23.90:0,24,655	0/1:23,0:23:5.77:6,0,504	1/1:6,10:17:24.08:597,24,0	1/1:4,20:25:57.20:1366,57,0	1/1:3,15:19:33.11:779,33,0	0/0:11,0:11:33.11:0,33,639	1/1:4,11:16:33.11:771,33,0	1/1:7,19:27:65.70:1521,66,0	1/1:7,19:30:52.41:1111,52,0	0/0:23,0:23:69.23:0,69,1264	0/0:29,0:29:84.27:0,84,1559	0/0:17,0:17:51.16:0,51,906	1/1:4,15:21:27.09:670,27,0	1/1:4,15:22:42.13:970,42,0	1/1:0,10:10:21.07:520,21,0	1/1:10,17:30:45.10:1071,45,0	1/1:8,17:27:63.65:1442,64,0	0/0:32,0:32:96.29:0,96,1767	1/1:3,9:12:30.10:738,30,0
chr10	31061235	.	T	TACACACAC	2901.90	PASS	AB=0.762;AC=41;AF=0.788;AN=52;BaseQRankSum=2.033;DP=653;FS=0.666;HRun=0;HaplotypeScore=162.5414;InbreedingCoeff=0.4650;MQ=54.69;MQ0=6;MQRankSum=-5.070;QD=6.07;ReadPosRankSum=-2.059;VQSLOD=2.2034;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:39,0:37:2.13:7,2,0	1/1:10,0:10:1.59:24,2,0	./.	./.	1/1:13,0:11:3.01:49,3,0	1/1:17,0:13:3:27,3,0	1/1:38,0:35:21.04:277,21,0	1/1:29,0:28:35.08:325,35,0	0/0:16,0:16:21.07:0,21,483	1/1:23,0:23:47.85:522,48,0	0/1:8,13:22:0:0,0,0	1/1:10,0:10:3.01:30,3,0	1/1:25,0:25:10.38:241,10,0	1/1:27,0:27:5.99:126,6,0	0/0:25,0:26:33.52:0,34,645	1/1:21,0:21:6.02:134,6,0	1/1:21,0:26:14.09:189,14,0	1/1:26,0:26:29:415,29,0	0/1:23,0:25:82.82:83,0,95	0/1:9,0:15:11.65:12,0,52	0/0:34,0:66:29.29:0,29,464	1/1:9,0:9:5.87:39,6,0	1/1:14,0:14:3.01:49,3,0	1/1:37,0:36:5.09:74,5,0	1/1:22,0:22:8.62:119,9,0	1/1:21,0:18:31.99:244,32,0	0/0:8,0:22:12.69:0,13,192	1/1:9,0:7:10.70:75,11,0
chr10	31061268	.	A	ACACACACACACACACG	7768.60	PASS	AB=1.000;AC=41;AF=0.732;AN=56;BaseQRankSum=0.052;DP=761;FS=6.216;HRun=0;HaplotypeScore=237.5256;InbreedingCoeff=0.7889;MQ=54.75;MQ0=10;MQRankSum=-4.881;QD=14.60;ReadPosRankSum=-3.795;VQSLOD=2.2409;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:35,0:33:24.23:239,24,0	1/1:13,0:13:18.80:184,19,0	0/0:27,0:13:29.19:0,29,328	0/0:31,0:17:42.04:0,42,446	1/1:14,0:12:15.38:150,15,0	1/1:18,0:14:13.94:180,14,0	1/1:31,0:28:43.11:593,43,0	1/1:40,0:39:99:954,101,0	0/0:19,0:19:51.02:0,51,955	1/1:28,0:28:76.49:1072,76,0	1/1:22,0:23:10.43:80,10,0	1/1:2,19:30:0.47:1,0,0	1/1:4,17:40:9.50:515,10,0	1/1:2,0:35:6.02:202,6,0	0/0:38,0:38:78.04:0,78,1549	1/1:0,12:29:3.48:177,3,0	1/1:29,0:30:37.35:656,37,0	1/1:8,0:22:19.31:684,19,0	0/1:24,0:23:31.90:32,0,362	0/0:22,0:22:27.98:0,28,441	0/0:69,0:69:99:0,104,1682	1/1:12,0:12:17.83:133,18,0	1/1:12,0:11:9:122,9,0	1/1:13,0:41:5.03:147,5,0	1/1:22,0:22:23.47:263,23,0	1/1:22,0:20:56.06:929,56,0	0/0:22,0:22:43.69:0,44,629	1/1:9,0:7:18.04:456,18,0
chr10	31062328	.	T	TTCC	10319.13	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=2.898;DP=578;FS=2.556;HRun=0;HaplotypeScore=91.4909;InbreedingCoeff=0.9535;MQ=48.30;MQ0=28;MQRankSum=-4.822;QD=27.81;ReadPosRankSum=-0.172;VQSLOD=4.4367;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:11,11:18:26.81:396,27,0	1/1:8,0:8:18.04:277,18,0	0/0:28,0:9:11.63:0,12,141	0/0:44,0:11:18.68:0,19,225	1/1:10,5:12:23.71:259,24,0	1/1:8,7:14:30.08:479,30,0	1/1:11,8:13:30.03:439,30,0	1/1:17,4:19:44.96:613,45,0	0/0:24,0:24:54.15:0,54,746	1/1:8,17:26:62.44:935,62,0	1/1:3,9:12:23.95:407,24,0	1/1:16,6:22:50.88:674,51,0	1/1:16,8:21:45.07:760,45,0	1/1:14,5:19:48.08:657,48,0	0/0:30,0:29:72.15:0,72,903	1/1:5,5:10:15.02:211,15,0	1/1:17,11:25:56.99:856,57,0	1/1:7,7:12:21.05:316,21,0	0/0:27,0:24:47.80:0,48,529	0/0:23,0:20:47.81:0,48,577	0/0:24,0:23:60.17:0,60,819	1/1:12,8:19:36.09:503,36,0	1/1:10,7:16:39.08:540,39,0	1/1:18,9:23:35.64:359,36,0	1/1:14,9:21:38.01:560,38,0	1/1:14,12:25:60.17:1059,60,0	0/0:5,0:5:12.03:0,12,156	1/1:2,0:2:2.97:20,3,0
chr10	31062361	.	CTCT	C	658.68	PASS	AB=0.959;AC=15;AF=0.268;AN=56;BaseQRankSum=8.346;DP=636;FS=28.867;HRun=0;HaplotypeScore=111.9355;InbreedingCoeff=-0.1654;MQ=38.03;MQ0=50;MQRankSum=-5.526;QD=2.48;ReadPosRankSum=-3.602;VQSLOD=-0.7501;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:17:21.72:72,0,22	0/0:3,0:4:8.53:0,9,68	0/0:75,0:7:21.07:0,21,351	0/0:95,0:10:29.31:0,29,607	0/0:17,0:13:2.44:0,2,30	1/1:17,0:16:4.89:91,5,0	0/1:18,1:15:22.92:27,0,23	0/0:21,0:21:15.37:0,15,163	0/0:17,0:17:45:0,45,1094	0/0:22,0:21:37.80:0,38,1139	0/0:14,0:14:42.10:0,42,898	0/1:19,1:20:49.21:49,0,265	0/1:23,1:24:6.78:134,0,7	0/1:12,0:13:29.86:30,0,99	0/0:20,0:20:52.08:0,52,1178	0/1:12,0:11:11.34:11,0,42	0/1:25,0:21:15.45:99,0,15	0/1:14,0:12:42.71:43,0,77	0/0:19,0:16:41.92:0,42,815	0/0:24,0:24:41.88:0,42,951	0/0:27,0:25:60.21:0,60,1443	0/1:17,1:19:3.43:26,0,3	0/1:13,0:12:2.26:2,0,38	0/1:22,0:20:26.36:26,0,53	0/1:18,1:16:27.05:31,0,27	0/1:21,0:19:99:169,0,156	0/0:12,0:9:10.85:0,11,200	0/0:2,0:2:3.01:0,3,66
chr10	31062364	.	TCTC	T	2499.06	PASS	AB=0.921;AC=32;AF=0.571;AN=56;BaseQRankSum=4.472;DP=633;FS=8.220;HRun=0;HaplotypeScore=104.8291;InbreedingCoeff=0.6354;MQ=38.52;MQ0=48;MQRankSum=-6.959;QD=7.83;ReadPosRankSum=-2.767;VQSLOD=1.5033;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:18:7.23:68,7,0	1/1:5,0:5:2.78:38,3,0	0/0:73,0:6:12.04:0,12,158	0/0:89,0:9:20.73:0,21,271	0/1:17,0:13:0:1,0,0	1/1:16,0:16:9.03:115,9,0	1/1:21,0:15:3:25,3,0	1/1:20,0:20:43.37:522,43,0	0/0:19,0:19:45.15:0,45,657	0/0:20,0:19:32.55:0,33,719	0/0:15,0:15:42.57:0,43,625	1/1:19,0:19:14.24:117,14,0	1/1:13,14:25:27.07:316,27,0	1/1:13,0:13:4.83:43,5,0	0/0:19,0:19:24.12:0,24,557	1/1:12,2:13:18.06:240,18,0	0/1:14,7:19:20.14:278,0,20	1/1:14,0:12:18.13:220,18,0	0/0:19,0:17:29.91:0,30,502	0/0:25,0:25:21.88:0,22,488	0/0:28,0:26:54.18:0,54,789	1/1:18,0:18:6:63,6,0	1/1:14,0:13:2.67:37,3,0	1/1:22,2:21:8.28:79,8,0	0/1:18,1:16:0.20:0,0,0	1/1:21,0:19:40.88:497,41,0	0/1:11,0:8:32.33:32,0,71	0/0:3,0:3:0.47:0,0,1
chr10	31062366	.	TC	T	2685.73	PASS	AB=0.770;AC=35;AF=0.625;AN=56;BaseQRankSum=4.366;DP=649;FS=3.155;HRun=2;HaplotypeScore=98.8748;InbreedingCoeff=0.6040;MQ=38.00;MQ0=48;MQRankSum=-6.388;QD=7.40;ReadPosRankSum=-3.432;VQSLOD=-0.2201;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:18,7:19:7.46:82,7,0	1/1:5,0:5:6.02:76,6,0	0/0:72,0:5:12.04:0,12,158	0/0:90,0:8:20.73:0,21,271	0/1:5,13:14:0.01:1,0,0	1/1:1,17:18:9.03:114,9,0	1/1:12,8:14:3:25,3,0	1/1:7,16:22:30.40:520,30,0	0/0:19,0:19:45.15:0,45,611	0/0:21,0:20:33.76:0,34,624	0/0:17,0:16:42.57:0,43,553	1/1:12,6:18:22.40:211,22,0	1/1:19,7:25:26.97:303,27,0	1/1:11,4:15:5.81:62,6,0	0/0:17,1:18:24.07:0,24,534	1/1:4,11:14:17.93:219,18,0	0/1:15,8:20:20.42:217,0,20	1/1:3,11:12:21.51:252,22,0	0/0:19,1:17:30.03:0,30,460	0/1:26,0:26:1.64:2,0,420	0/0:29,0:26:53.99:0,54,733	1/1:3,16:19:6:63,6,0	1/1:5,11:15:2.67:37,3,0	1/1:18,7:22:8.73:77,9,0	0/1:2,17:16:0.38:0,0,0	1/1:10,13:21:46.09:575,46,0	0/1:12,0:9:29.39:29,0,72	1/1:3,0:3:2.37:8,2,0
chr10	31062367	.	C	CT	2911.45	PASS	AB=0.832;AC=36;AF=0.643;AN=56;BaseQRankSum=3.424;DP=662;FS=3.089;HRun=1;HaplotypeScore=102.3167;InbreedingCoeff=0.5166;MQ=38.03;MQ0=48;MQRankSum=-6.109;QD=7.35;ReadPosRankSum=-3.490;VQSLOD=-0.3542;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,14:20:7.47:102,7,0	1/1:1,4:5:6.02:77,6,0	0/0:72,0:5:12.04:0,12,158	0/0:90,0:8:20.73:0,21,271	0/1:16,2:14:0:1,0,0	1/1:19,0:19:9.50:115,9,0	1/1:10,10:14:3:25,3,0	1/1:22,0:21:36.73:596,37,0	0/0:19,0:19:45.15:0,45,603	0/0:22,0:21:48.29:0,48,617	0/0:17,0:16:42.09:0,42,526	1/1:6,15:21:24.04:317,24,0	1/1:25,1:25:26.28:294,26,0	1/1:6,7:13:5.82:86,6,0	0/0:17,0:17:28.05:0,28,533	1/1:15,0:14:17.92:219,18,0	0/1:21,2:20:20.14:200,0,20	1/1:13,1:11:21.05:252,21,0	0/1:22,0:20:3.24:3,0,394	0/1:17,12:29:17.27:17,0,418	0/0:23,6:26:53.50:0,53,702	1/1:21,0:21:6:63,6,0	1/1:15,0:14:2.67:37,3,0	1/1:15,11:23:7.42:51,7,0	0/1:19,1:17:0.38:0,0,0	1/1:16,6:20:46.50:569,46,0	0/1:3,3:12:25.51:26,0,72	1/1:0,3:3:3.01:48,3,0
chr10	31064560	.	T	TAGCA	32022.62	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=3.654;DP=691;FS=7.439;HRun=0;HaplotypeScore=124.8589;InbreedingCoeff=0.9948;MQ=80.13;MQ0=0;MQRankSum=-7.362;QD=65.89;ReadPosRankSum=2.977;VQSLOD=6.7746;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,46:50:99:3354,126,0	1/1:0,5:5:12.04:320,12,0	0/0:24,0:24:47.66:0,48,962	0/0:16,0:17:43.80:0,44,766	1/1:1,14:17:39.13:1039,39,0	1/1:3,23:26:75.18:1878,75,0	1/1:2,16:18:45.15:1196,45,0	1/1:10,19:31:87.30:2112,87,0	0/0:22,0:22:63.22:0,63,1175	1/1:5,24:30:93.30:2303,93,0	1/1:3,12:15:33.11:880,33,0	1/1:4,17:21:60.21:1532,60,0	1/1:4,22:27:69.24:1819,69,0	1/1:1,20:22:60.21:1591,60,0	0/0:31,0:31:84.29:0,84,1568	1/1:4,22:27:66.23:1756,66,0	1/1:3,28:32:81.28:2157,81,0	1/1:4,17:23:57.15:1420,57,0	0/0:31,0:31:84.25:0,84,1469	0/0:15,0:15:45.14:0,45,801	0/0:31,0:31:81.28:0,81,1512	1/1:0,21:22:57.20:1518,57,0	1/1:2,17:20:42.14:1118,42,0	1/1:3,27:32:62.30:1679,62,0	1/1:6,16:22:39.13:1038,39,0	1/1:1,29:32:93.31:2354,93,0	0/0:34,0:34:93.30:0,93,1688	1/1:0,12:12:36.12:959,36,0
chr10	31064899	.	CAGACAGAG	C	8892.73	PASS	AB=0.869;AC=36;AF=0.643;AN=56;BaseQRankSum=9.012;DP=788;FS=19.747;HRun=0;HaplotypeScore=263.7614;InbreedingCoeff=0.5357;MQ=61.74;MQ0=35;MQRankSum=-5.263;QD=18.00;ReadPosRankSum=1.689;VQSLOD=2.4933;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:2,11:42:9.47:288,0,9	1/1:6,1:7:6.49:103,6,0	0/0:75,0:31:8.72:0,9,265	0/0:95,0:30:21.07:0,21,255	1/1:14,6:20:22.52:206,23,0	1/1:9,5:14:38.33:355,38,0	1/1:15,3:18:46.09:353,46,0	1/1:26,0:26:65.64:505,66,0	0/0:22,0:22:54.06:0,54,1342	0/1:37,0:37:99:375,0,548	0/1:15,0:15:75.79:76,0,209	1/1:23,5:28:76.93:629,77,0	1/1:14,3:17:46.78:450,47,0	1/1:18,6:24:62.70:685,63,0	0/0:40,0:40:99:0,102,2088	0/1:22,10:32:19.44:756,0,19	1/1:1,6:28:17.69:380,18,0	1/1:17,4:21:50.03:504,50,0	0/0:20,0:20:42.83:0,43,402	0/0:17,0:17:32.19:0,32,250	0/0:24,0:23:19.49:0,19,313	1/1:12,6:18:27.80:300,28,0	1/1:15,3:18:26.26:306,26,0	1/1:22,4:26:34.23:323,34,0	1/1:13,13:27:36.45:691,36,0	0/1:16,11:27:3.39:1084,0,3	0/1:26,0:27:38.90:39,0,323	1/1:19,3:20:34.45:484,34,0
chr10	31064901	.	GAC	G	6714.66	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=10.738;DP=781;FS=3.736;HRun=0;HaplotypeScore=210.3872;InbreedingCoeff=0.9636;MQ=60.98;MQ0=36;MQRankSum=-4.358;QD=14.53;ReadPosRankSum=0.578;VQSLOD=4.7287;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:41,0:40:15.51:102,16,0	1/1:7,0:7:14.93:115,15,0	0/0:73,0:30:16.16:0,16,274	0/0:94,0:30:18.78:0,19,253	1/1:22,0:22:28.64:206,29,0	1/1:12,1:13:31.64:234,32,0	1/1:17,0:17:40.91:283,41,0	1/1:25,0:25:65.64:505,66,0	0/0:22,0:22:42.86:0,43,648	1/1:8,27:35:34:666,34,0	1/1:15,0:15:13.43:173,13,0	1/1:28,0:28:68.56:519,69,0	1/1:16,0:16:44.16:299,44,0	1/1:23,1:24:58.65:452,59,0	0/0:40,0:41:66.17:0,66,983	1/1:30,0:30:14.49:461,14,0	1/1:28,0:28:17.70:145,18,0	1/1:21,0:21:53.66:404,54,0	0/0:20,0:20:40.26:0,40,328	0/0:16,0:16:9.96:0,10,233	0/0:24,0:23:8.34:0,8,275	1/1:19,1:20:32.72:243,33,0	1/1:18,0:18:35.72:269,36,0	1/1:25,1:26:32.02:265,32,0	1/1:26,0:26:50.84:419,51,0	1/1:29,0:29:74.58:621,75,0	0/0:27,0:27:33.27:0,33,320	1/1:19,2:19:34.03:334,34,0
chr10	31064903	.	CAGAGAG	C	1916.10	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=6.742;DP=785;FS=0.625;HRun=0;HaplotypeScore=265.8370;InbreedingCoeff=-0.0345;MQ=59.53;MQ0=36;MQRankSum=-5.218;QD=3.97;ReadPosRankSum=4.752;VQSLOD=2.2227;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:41,0:40:86.73:89,0,87	0/0:7,0:7:2.92:0,3,17	0/1:72,0:28:0:0,0,0	0/0:93,0:28:0:0,0,1	0/0:23,0:23:5.13:0,5,32	0/1:15,0:15:21.79:44,0,22	0/1:16,0:16:30.82:35,0,31	0/0:26,0:26:2.37:0,2,8	0/0:21,0:21:38.88:0,39,951	0/0:35,0:35:53.52:0,54,755	0/0:14,0:14:12.02:0,12,199	0/1:28,0:28:31.17:31,0,38	0/1:19,0:19:4.85:46,0,5	1/1:24,0:24:2.96:147,3,0	0/0:36,0:42:59.27:0,59,1210	0/1:31,0:31:99:172,0,121	1/1:28,0:28:14.37:174,14,0	0/1:23,0:23:9.65:70,0,10	1/1:14,5:19:8.79:112,9,0	0/0:12,5:17:2.65:0,3,23	0/0:24,0:23:2.18:0,2,6	0/1:20,0:20:29.36:29,0,37	0/1:17,0:17:9.73:36,0,10	0/1:26,0:26:10.51:36,0,11	0/1:26,0:26:99:164,0,113	0/1:30,0:30:99:352,0,110	1/1:16,9:27:24.70:441,25,0	1/1:21,0:19:8.94:99,9,0
chr10	31064944	.	AGC	A	5168.49	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=13.307;DP=616;FS=13.356;HRun=0;HaplotypeScore=183.3001;InbreedingCoeff=0.9720;MQ=61.01;MQ0=17;MQRankSum=-8.939;QD=14.08;ReadPosRankSum=1.537;VQSLOD=4.1324;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:37,0:36:88.98:630,89,0	1/1:7,0:7:20.78:147,21,0	0/0:26,0:11:25.88:0,26,247	0/0:41,0:20:32.81:0,33,406	1/1:22,0:22:23.47:141,23,0	1/1:6,14:19:14.82:106,15,0	1/1:15,0:15:38.53:273,39,0	1/1:37,0:36:87.99:701,88,0	0/0:30,0:29:64.03:0,64,861	0/0:33,0:33:68.38:0,68,801	0/0:17,0:17:34.93:0,35,294	1/1:6,14:19:14.82:105,15,0	1/1:3,9:12:11.89:101,12,0	1/1:19,0:19:53.91:394,54,0	0/0:33,0:33:25.19:0,25,655	1/1:11,13:24:14.35:247,14,0	1/1:23,0:23:56.57:439,57,0	1/1:6,10:16:17.72:141,18,0	0/0:17,0:17:35.25:0,35,231	0/0:13,0:13:23.49:0,23,166	0/0:18,0:18:28.88:0,29,201	1/1:15,0:15:23.60:153,24,0	1/1:14,0:14:8.46:62,8,0	1/1:26,0:26:39.77:301,40,0	1/1:23,0:23:65.35:479,65,0	1/1:26,0:26:17.94:523,18,0	0/0:21,0:21:18.32:0,18,159	1/1:11,0:10:29.78:226,30,0
chr10	31064947	.	GAGCA	G	9289.29	PASS	AB=0.519;AC=35;AF=0.625;AN=56;BaseQRankSum=9.568;DP=624;FS=11.326;HRun=0;HaplotypeScore=187.1551;InbreedingCoeff=0.9156;MQ=64.32;MQ0=15;MQRankSum=-8.753;QD=25.04;ReadPosRankSum=1.081;VQSLOD=4.0862;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:27,12:39:98.03:1136,98,0	1/1:7,1:8:23.94:292,24,0	0/0:30,0:16:36.08:0,36,722	0/0:42,0:21:52.46:0,52,999	1/1:0,21:21:23.83:233,24,0	1/1:14,5:19:14.91:167,15,0	1/1:12,3:15:38.63:476,39,0	1/1:1,35:35:99:1344,102,0	0/0:30,0:29:81.23:0,81,1566	0/0:31,0:31:89.51:0,90,1776	0/0:16,0:16:31.17:0,31,532	1/1:15,5:19:14.76:154,15,0	1/1:9,3:12:11.81:139,12,0	1/1:13,6:19:53.88:719,54,0	0/0:30,0:30:74.25:0,74,1381	1/1:15,10:25:41.29:504,41,0	1/1:18,6:24:60.18:850,60,0	1/1:12,4:16:17.97:238,18,0	0/0:17,0:17:43.68:0,44,632	0/0:14,0:14:26.76:0,27,395	0/0:20,0:20:38.61:0,39,560	1/1:0,16:16:23.80:243,24,0	1/1:0,14:14:8.36:105,8,0	1/1:20,4:25:38.84:560,39,0	1/1:8,14:23:64.29:778,64,0	0/1:2,26:28:6.73:942,0,7	0/0:22,0:22:39.84:0,40,434	1/1:8,3:10:30.09:410,30,0
chr10	31065802	.	T	TC	1133.36	PASS	AB=0.955;AC=5;AF=0.089;AN=56;BaseQRankSum=-6.453;DP=677;FS=8.677;HRun=8;HaplotypeScore=67.8797;InbreedingCoeff=0.8725;MQ=82.77;MQ0=0;MQRankSum=-0.358;QD=16.43;ReadPosRankSum=-1.930;VQSLOD=2.7838;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,108,988	0/0:15,0:15:36:0,36,324	0/1:20,1:21:0.53:1,0,214	0/0:24,0:23:39.34:0,39,307	0/0:34,0:34:98.98:0,99,896	0/0:20,0:20:54.02:0,54,494	0/0:39,0:39:99:0,105,956	0/0:22,0:22:45.01:0,45,407	0/0:30,0:30:84.04:0,84,768	1/1:3,25:28:48.49:805,48,0	1/1:2,18:20:39.12:450,39,0	0/0:21,0:21:57.02:0,57,522	0/0:20,0:20:60.03:0,60,549	0/0:18,0:18:50.94:0,51,448	0/0:18,0:18:48.02:0,48,436	0/0:19,0:19:54.03:0,54,494	0/0:19,0:19:53.06:0,53,473	0/0:32,0:32:93.02:0,93,844	0/0:21,0:21:56.98:0,57,507	0/0:22,0:22:60.02:0,60,549	0/0:27,0:27:72.03:0,72,655	0/0:31,0:31:93.05:0,93,849	0/0:25,0:25:69.02:0,69,628	0/0:18,0:18:48.02:0,48,439	0/0:30,0:30:72.33:0,72,706	0/0:22,0:22:53.98:0,54,481	0/0:24,0:24:63.01:0,63,571	0/0:16,0:16:42.01:0,42,384
chr10	31066674	.	ATT	A	8701.36	PASS	AB=0.571;AC=35;AF=0.625;AN=56;BaseQRankSum=1.314;DP=498;FS=7.523;HRun=10;HaplotypeScore=67.2741;InbreedingCoeff=0.9068;MQ=72.27;MQ0=0;MQRankSum=0.790;QD=24.86;ReadPosRankSum=5.951;VQSLOD=4.0480;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:2,45:47:99:1405,126,0	1/1:1,8:9:24.06:268,24,0	0/0:16,0:16:32.72:0,33,451	0/0:11,0:11:9.88:0,10,271	1/1:3,18:21:45.09:498,45,0	1/1:3,16:19:45.11:502,45,0	1/1:1,18:19:39.10:435,39,0	1/1:2,19:21:48.12:534,48,0	0/0:11,0:11:30.10:0,30,476	0/0:6,0:23:39.91:0,40,134	0/0:1,0:13:19.77:0,20,84	1/1:2,14:16:33.09:368,33,0	1/1:0,20:20:45.12:502,45,0	1/1:0,15:15:39.11:435,39,0	0/0:12,0:12:32.60:0,33,483	0/1:3,9:12:17.52:271,0,18	1/1:0,38:38:93.25:1037,93,0	1/1:5,22:28:56.87:614,57,0	0/0:18,0:18:42.12:0,42,620	0/0:15,0:15:36.12:0,36,567	0/0:12,0:12:27.07:0,27,405	1/1:5,12:17:21.19:263,21,0	1/1:2,12:14:33.08:368,33,0	1/1:2,17:19:42.10:468,42,0	1/1:1,17:18:36.09:401,36,0	1/1:2,8:10:21.05:234,21,0	0/0:16,0:17:41.63:0,42,617	1/1:0,7:7:9.02:100,9,0
chr10	31067217	.	GCAAA	G	1939.66	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.706;DP=681;FS=0.614;HRun=0;HaplotypeScore=112.7487;InbreedingCoeff=0.9944;MQ=89.38;MQ0=0;MQRankSum=-4.456;QD=51.04;ReadPosRankSum=0.789;VQSLOD=4.5572;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,114,2938	0/0:9,0:9:24.08:0,24,657	0/0:22,0:22:48.13:0,48,1412	0/0:30,0:30:75.95:0,76,1524	0/0:23,0:23:69.19:0,69,1744	0/0:23,0:23:69.22:0,69,1771	0/0:29,0:29:81.24:0,81,2174	0/0:28,0:28:84.27:0,84,2130	0/0:27,0:27:75.24:0,75,1943	1/1:1,25:26:75.23:1373,75,0	1/1:0,12:12:36.12:688,36,0	0/0:26,0:26:75.24:0,75,1936	0/0:21,0:21:63.21:0,63,1636	0/0:17,0:17:51.17:0,51,1301	0/0:25,0:25:69.24:0,69,1847	0/0:32,0:32:96.33:0,96,2618	0/0:28,0:28:81.28:0,81,2202	0/0:21,0:21:60.19:0,60,1569	0/0:25,0:25:72.22:0,72,1739	0/0:26,0:26:78.26:0,78,2019	0/0:20,0:20:60.21:0,60,1623	0/0:24,0:24:66.16:0,66,1675	0/0:28,0:28:84.17:0,84,2048	0/0:28,0:28:84.26:0,84,2129	0/0:24,0:24:72.21:0,72,1746	0/0:30,1:31:29.13:0,29,2190	0/0:31,0:31:90.29:0,90,2391	0/0:6,0:6:18.05:0,18,436
chr10	31068255	.	CA	C	9253.63	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=9.496;DP=615;FS=0.000;HRun=9;HaplotypeScore=66.6497;InbreedingCoeff=0.9979;MQ=78.20;MQ0=1;MQRankSum=-0.409;QD=21.57;ReadPosRankSum=4.554;VQSLOD=5.3888;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,22:27:58.65:570,59,0	1/1:3,9:12:23.96:211,24,0	0/0:18,0:19:35.90:0,36,358	0/0:22,0:18:22.50:0,23,223	1/1:2,31:33:90.04:824,90,0	1/1:1,29:30:72.04:659,72,0	1/1:3,7:10:21:192,21,0	1/1:3,26:29:78.03:709,78,0	0/0:17,0:17:48.14:0,48,554	1/1:4,25:29:75.03:686,75,0	1/1:1,24:25:69.02:626,69,0	1/1:6,23:29:57.02:522,57,0	1/1:3,22:25:60.03:549,60,0	1/1:5,12:17:33.01:302,33,0	0/0:30,0:30:72.15:0,72,797	1/1:2,19:21:54.03:494,54,0	1/1:1,20:21:42.02:384,42,0	1/1:4,19:23:45.02:411,45,0	0/0:19,0:19:45.12:0,45,510	0/0:22,0:22:57.17:0,57,656	0/0:20,0:20:48.14:0,48,554	1/1:3,15:18:42.02:384,42,0	1/1:1,13:14:33.01:302,33,0	1/1:1,15:16:33.02:302,33,0	1/1:3,11:14:30.01:275,30,0	1/1:2,23:25:69.03:631,69,0	0/0:36,0:36:96.26:0,96,1093	1/1:0,11:11:24.01:220,24,0
chr10	31068865	.	CAG	C	2340.14	PASS	AB=0.929;AC=5;AF=0.089;AN=56;BaseQRankSum=10.692;DP=674;FS=6.478;HRun=0;HaplotypeScore=77.1168;InbreedingCoeff=0.8194;MQ=87.69;MQ0=0;MQRankSum=-4.568;QD=26.90;ReadPosRankSum=2.354;VQSLOD=4.4323;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:69.22:0,69,1213	0/0:16,0:16:45.15:0,45,810	0/0:29,0:29:75.11:0,75,1223	0/0:20,0:20:56.53:0,57,933	0/0:29,0:29:75.12:0,75,1253	0/0:31,0:31:90.26:0,90,1532	0/0:19,0:19:57.20:0,57,1026	0/0:32,0:32:93.32:0,93,1652	0/0:16,0:16:48.16:0,48,845	1/1:0,32:32:93.30:1284,93,0	1/1:0,29:29:84.28:1176,84,0	0/0:22,0:22:63.22:0,63,1133	0/0:16,0:16:45.14:0,45,768	0/0:17,0:17:51.15:0,51,855	0/0:43,0:43:99:0,126,2204	0/0:26,0:26:75.26:0,75,1350	0/0:17,0:17:51.15:0,51,854	0/0:23,0:23:69.17:0,69,1162	0/0:16,0:16:39.12:0,39,674	0/0:43,0:43:99:0,123,2183	0/0:27,0:27:72.25:0,72,1296	0/0:24,0:24:69.24:0,69,1242	0/0:19,0:19:51.17:0,51,913	0/0:16,0:16:42.14:0,42,756	0/0:22,0:22:63.20:0,63,1087	0/1:24,2:26:5.78:6,0,1117	0/0:28,0:28:81.22:0,81,1356	0/0:12,0:12:36.12:0,36,633
chr10	31074247	.	ACTC	A	1973.40	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.647;DP=600;FS=5.796;HRun=0;HaplotypeScore=118.7875;InbreedingCoeff=0.9969;MQ=92.37;MQ0=0;MQRankSum=-0.403;QD=38.69;ReadPosRankSum=1.802;VQSLOD=4.6705;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:69.24:0,69,1551	0/0:18,0:18:54.16:0,54,1171	0/0:30,0:29:78.27:0,78,1746	0/0:25,0:25:61.12:0,61,1280	0/0:18,0:18:54.19:0,54,1222	0/0:13,0:13:39.13:0,39,883	0/0:30,0:30:75.24:0,75,1651	0/0:17,0:17:45.15:0,45,985	0/0:21,0:21:57.20:0,57,1267	1/1:1,29:30:84.28:1375,84,0	1/1:1,20:21:45.11:720,45,0	0/0:20,0:20:54.19:0,54,1222	0/0:19,0:19:57.16:0,57,1206	0/0:19,0:19:54.19:0,54,1220	0/0:26,0:26:75.25:0,75,1628	0/0:28,0:27:81.28:0,81,1800	0/0:29,0:29:87.30:0,87,1971	0/0:20,0:20:57.20:0,57,1291	0/0:26,0:26:72.21:0,72,1519	0/0:20,0:20:48.16:0,48,1088	0/0:27,0:27:78.27:0,78,1764	0/0:9,0:9:27.09:0,27,612	0/0:14,0:14:36.12:0,36,808	0/0:22,0:22:63.22:0,63,1408	0/0:13,0:13:33.11:0,33,739	0/0:13,0:13:30.10:0,30,680	0/0:36,0:36:99:0,102,2253	0/0:10,0:10:21.07:0,21,476
chr10	31074358	.	GGTGTGTGTGTGT	G	296.02	PASS	AC=2;AF=0.037;AN=54;BaseQRankSum=3.280;DP=551;FS=10.899;HRun=0;HaplotypeScore=179.5725;InbreedingCoeff=0.6294;MQ=63.94;MQ0=14;MQRankSum=-2.880;QD=18.50;ReadPosRankSum=0.678;VQSLOD=2.1818;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:30:20.96:0,21,571	0/0:12,0:11:12.04:0,12,403	0/0:29,0:21:15:0,15,298	0/0:29,0:21:11.86:0,12,190	0/0:22,0:22:15.52:0,16,653	0/0:14,0:14:18.06:0,18,953	0/0:17,0:15:9.03:0,9,340	0/0:22,0:20:30.09:0,30,1107	0/0:19,0:19:30.10:0,30,1330	1/1:12,3:15:15.05:384,15,0	./.	0/0:19,0:19:21.70:0,22,739	0/0:21,0:21:31.05:0,31,1212	0/0:11,0:11:17.95:0,18,639	0/0:25,0:24:54.17:0,54,2381	0/0:18,0:17:18.53:0,19,833	0/0:22,0:21:26.12:0,26,1120	0/0:15,0:15:33.11:0,33,1517	0/0:23,0:22:37.93:0,38,1457	0/0:21,0:21:14.41:0,14,549	0/0:39,0:38:69.67:0,70,3034	0/0:18,0:18:6.02:0,6,335	0/0:20,0:20:18.50:0,18,556	0/0:17,0:17:18.06:0,18,759	0/0:13,0:13:12.04:0,12,649	0/0:25,0:25:27.08:0,27,955	0/0:18,0:18:28.32:0,28,1283	0/0:2,0:2:3.01:0,3,144
chr10	31074398	.	T	TGTGTGAGAGAGAGA	4294.68	PASS	AB=0.997;AC=31;AF=0.574;AN=54;BaseQRankSum=5.311;DP=517;FS=1.772;HRun=0;HaplotypeScore=180.5521;InbreedingCoeff=-0.0511;MQ=42.64;MQ0=27;MQRankSum=-3.870;QD=11.04;ReadPosRankSum=-7.012;VQSLOD=1.6422;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:26:8.50:37,9,0	0/1:8,0:8:22.25:169,0,22	0/0:11,0:3:4.63:0,5,87	0/1:9,0:4:9.63:10,0,83	1/1:18,0:18:5.95:44,6,0	0/1:14,0:14:13.95:264,0,14	1/1:18,0:15:12.03:256,12,0	0/1:23,0:21:44.65:558,0,45	0/0:21,0:21:31.32:0,31,730	0/1:26,0:22:76.50:400,0,76	./.	0/1:18,0:18:23.50:252,0,23	0/1:19,0:18:79.95:208,0,80	1/1:18,0:18:5.37:38,5,0	0/1:21,0:19:9.87:10,0,838	0/1:28,0:26:58.55:220,0,59	0/1:25,0:24:10.21:606,0,10	0/1:13,0:13:90.51:223,0,91	0/1:16,0:14:24.08:24,0,291	0/0:11,0:10:14.59:0,15,395	0/0:50,0:45:22.94:0,23,1990	0/0:17,1:16:4.82:0,5,31	1/1:14,0:14:2.88:75,3,0	1/1:16,0:16:11.01:146,11,0	1/1:21,0:18:9.87:126,10,0	1/1:13,0:13:18.53:515,19,0	0/1:16,0:14:0.13:0,0,535	1/1:4,0:3:5.99:117,6,0
chr10	31078356	.	TACACACAC	T	5598.31	PASS	AB=0.648;AC=34;AF=0.607;AN=56;BaseQRankSum=0.907;DP=560;FS=18.571;HRun=0;HaplotypeScore=152.0054;InbreedingCoeff=0.7046;MQ=59.11;MQ0=9;MQRankSum=-8.247;QD=15.73;ReadPosRankSum=1.603;VQSLOD=3.1482;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:9,32:41:21.07:541,21,0	1/1:3,5:8:6.02:154,6,0	0/0:37,0:22:21.53:0,22,316	0/0:28,0:17:24.04:0,24,436	1/1:5,9:15:6.36:134,6,0	1/1:6,13:20:9.03:232,9,0	1/1:3,18:22:15:327,15,0	1/1:9,3:12:5.95:93,6,0	0/0:19,0:19:45.15:0,45,1756	0/0:6,0:13:16.18:0,16,209	0/0:6,0:18:11.99:0,12,99	1/1:7,16:24:14.98:386,15,0	1/1:3,9:15:20.90:434,21,0	0/1:6,10:16:23.81:294,0,24	0/0:11,0:11:21.07:0,21,793	1/1:10,15:25:11.48:308,11,0	0/1:17,14:32:12.36:412,0,12	1/1:4,16:22:24.04:535,24,0	0/0:5,0:6:6.01:0,6,90	0/0:8,0:15:15.03:0,15,259	0/0:16,0:39:54.15:0,54,1047	1/1:11,11:22:6.02:115,6,0	1/1:2,8:10:2.90:77,3,0	1/1:5,24:28:9.03:231,9,0	1/1:5,10:16:15.05:338,15,0	1/1:8,13:21:17.33:833,17,0	0/0:5,0:15:34.61:0,35,593	1/1:1,5:5:6.02:154,6,0
chr10	31078654	.	G	GA	707.06	PASS	AC=4;AF=0.074;AN=54;BaseQRankSum=-2.335;DP=494;FS=1.900;HRun=6;HaplotypeScore=63.6665;InbreedingCoeff=0.7465;MQ=41.38;MQ0=79;MQRankSum=-1.465;QD=20.80;ReadPosRankSum=0.298;VQSLOD=3.0099;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:27:24.05:0,24,245	0/0:12,0:12:30.07:0,30,306	0/0:8,0:3:2.06:0,2,25	./.	0/0:18,0:14:17.71:0,18,183	0/0:14,0:13:15.03:0,15,153	0/0:17,0:13:24.05:0,24,245	0/0:29,0:16:42.08:0,42,422	0/0:21,0:19:29.79:0,30,306	1/1:3,19:19:47.94:600,48,0	1/1:2,10:12:18.06:225,18,0	0/0:16,0:13:12.02:0,12,122	0/0:20,0:18:38.94:0,39,391	0/0:14,0:11:15.03:0,15,153	0/0:36,0:35:48.09:0,48,483	0/0:18,0:14:23.28:0,23,243	0/0:24,0:19:21.04:0,21,214	0/0:15,0:12:12.01:0,12,122	0/0:21,0:16:39.08:0,39,398	0/0:21,0:21:51.11:0,51,520	0/0:9,0:7:15.03:0,15,153	0/0:17,0:16:18.04:0,18,183	0/0:11,0:9:6.01:0,6,61	0/0:11,0:11:11.98:0,12,111	0/0:10,0:7:12.01:0,12,122	0/0:21,0:18:45.07:0,45,449	0/0:29,0:24:39.08:0,39,398	0/0:5,0:3:6.01:0,6,61
chr10	31078705	.	AGTGT	A	426.19	PASS	AB=1.000;AC=24;AF=0.571;AN=42;BaseQRankSum=3.728;DP=475;FS=7.969;HRun=0;HaplotypeScore=84.6577;InbreedingCoeff=0.3521;MQ=31.38;MQ0=111;MQRankSum=-0.088;QD=1.85;ReadPosRankSum=-0.470;VQSLOD=0.7256;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	./.	./.	1/1:11,0:7:2.97:20,3,0	0/0:11,0:6:3.01:0,3,40	0/0:26,0:20:2.59:0,3,38	1/1:19,0:18:12.02:120,12,0	1/1:10,0:11:3:28,3,0	1/1:14,0:8:2.97:20,3,0	0/0:13,1:11:0.89:0,1,2	1/1:20,0:12:6.40:41,6,0	1/1:19,20:35:6.02:93,6,0	1/1:18,0:14:4.09:22,4,0	0/0:19,0:12:2.98:0,3,21	1/1:15,0:8:0.47:1,0,0	0/0:19,0:16:15.51:0,16,254	0/0:25,0:25:9.03:0,9,145	1/1:18,0:6:0.47:1,0,0	1/1:19,0:21:2.61:18,3,0	./.	0/0:14,1:9:0:0,0,0	0/1:10,0:9:13.77:14,0,31	1/1:20,0:20:12.92:143,13,0	0/0:18,0:12:6.02:0,6,139	0/1:5,0:4:13.97:34,0,14
chr10	31078743	.	TGTGA	T	855.01	PASS	AB=0.966;AC=31;AF=0.596;AN=52;BaseQRankSum=0.072;DP=535;FS=9.218;HRun=0;HaplotypeScore=113.1875;InbreedingCoeff=0.2589;MQ=26.69;MQ0=134;MQRankSum=0.322;QD=2.32;ReadPosRankSum=1.156;VQSLOD=1.4097;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	1/1:9,0:8:5.72:52,6,0	./.	0/0:9,0:1:2.98:0,3,22	0/0:15,0:12:0:0,0,1	0/1:20,0:13:0:0,0,1	1/1:17,0:9:2.94:37,3,0	0/0:11,0:3:2.97:0,3,20	0/0:34,0:29:3.07:0,3,34	0/1:15,0:13:8.20:8,0,150	1/1:13,0:12:1.86:11,2,0	1/1:23,2:16:5.71:55,6,0	1/1:24,2:19:11.66:72,12,0	1/1:24,5:20:7.12:87,7,0	1/1:41,0:34:5.57:57,6,0	1/1:33,1:22:8.42:76,8,0	0/1:22,2:10:5.10:18,0,5	1/1:14,0:5:5.87:37,6,0	0/1:17,0:8:24.25:24,0,133	0/0:13,0:13:8.97:0,9,93	1/1:38,0:14:0.47:1,0,0	1/1:17,1:18:2.48:35,2,0	0/0:6,0:6:0:0,0,0	0/0:29,1:11:0:0,0,0	0/1:9,1:9:13.46:32,0,13	1/1:11,2:10:19.21:290,19,0	0/0:15,0:11:3.21:0,3,99	1/1:5,1:5:8.66:98,9,0
chr10	31078785	.	TGA	T	982.19	PASS	AB=0.865;AC=25;AF=0.481;AN=52;BaseQRankSum=3.441;DP=628;FS=0.000;HRun=0;HaplotypeScore=104.4606;InbreedingCoeff=0.6274;MQ=28.92;MQ0=155;MQRankSum=-4.753;QD=3.96;ReadPosRankSum=5.111;VQSLOD=1.6228;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	1/1:8,4:9:5.98:70,6,0	0/0:19,0:3:2.91:0,3,41	./.	0/0:10,4:15:0:0,0,0	0/0:8,3:9:2.94:0,3,18	0/1:25,0:13:0.01:0,0,0	0/0:40,0:5:11.93:0,12,103	0/0:29,0:25:5.94:0,6,155	1/1:11,1:10:17.37:113,17,0	0/0:8,0:9:0:0,0,1	1/1:16,4:14:6.02:73,6,0	1/1:20,3:17:14.93:148,15,0	1/1:19,7:19:3.41:37,3,0	0/0:38,0:33:14.71:0,15,187	1/1:29,5:26:12.10:151,12,0	1/1:10,4:5:5.15:78,5,0	1/1:7,2:4:3.01:37,3,0	0/0:25,0:9:10.44:0,10,104	0/0:13,0:12:12.43:0,12,96	0/0:77,0:50:35.50:0,36,441	0/1:14,2:16:0.03:0,0,0	0/1:7,4:12:0:0,0,0	0/0:22,3:10:0:0,0,0	1/1:7,5:13:5.50:46,5,0	1/1:16,4:13:12.74:223,13,0	0/0:22,0:15:32.86:0,33,388	1/1:6,4:9:14.86:165,15,0
chr10	31078823	.	AGT	A	56.41	PASS	AB=0.990;AC=14;AF=0.280;AN=50;BaseQRankSum=1.624;DP=706;FS=0.000;HRun=0;HaplotypeScore=106.9914;InbreedingCoeff=0.1845;MQ=28.91;MQ0=133;MQRankSum=0.544;QD=0.19;ReadPosRankSum=1.131;VQSLOD=1.5803;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:23,1:16:0:0,0,0	1/1:13,0:10:1.23:16,1,0	./.	0/0:31,0:3:3.48:0,3,39	./.	0/0:17,0:15:15.05:0,15,234	0/0:35,0:16:0:0,0,0	./.	0/0:32,0:29:30:0,30,387	0/0:11,0:5:8.96:0,9,91	0/1:8,0:6:0:0,0,0	0/0:30,1:24:2.46:0,2,8	0/0:27,0:17:3.58:0,4,123	0/0:28,0:21:3.53:0,4,25	0/0:44,0:38:12.88:0,13,272	0/0:25,0:18:2.43:0,2,20	0/1:21,0:10:0.95:1,0,141	0/1:11,0:7:27.41:27,0,32	0/0:23,0:8:14.76:0,15,110	0/0:15,0:15:19.32:0,19,137	0/1:105,1:70:68.02:68,0,372	1/1:22,0:21:2.79:14,3,0	0/1:15,0:14:0:0,0,0	0/1:26,0:17:4.54:5,0,38	0/1:16,0:13:0:0,0,0	0/1:21,0:11:2.76:3,0,50	0/0:23,0:16:26.93:0,27,210	0/1:17,1:15:0.72:32,0,1
chr10	31078827	.	TGTGTGTGTGTGTGAGAGAGAGA	T	119.60	PASS	AB=1.000;AC=8;AF=0.160;AN=50;BaseQRankSum=2.208;DP=736;FS=15.735;HRun=0;HaplotypeScore=171.6273;InbreedingCoeff=0.2646;MQ=28.60;MQ0=141;MQRankSum=-2.584;QD=0.70;ReadPosRankSum=-2.038;VQSLOD=1.1336;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:17:2.44:0,2,7	0/0:16,0:12:5.73:0,6,36	./.	0/0:30,0:3:3.01:0,3,55	./.	0/0:17,0:15:18.05:0,18,518	0/1:39,0:18:0:0,0,0	1/1:23,6:5:14.26:192,14,0	0/0:36,0:32:29.82:0,30,971	0/0:11,0:6:6.20:0,6,185	./.	0/1:33,0:25:2.51:3,0,97	0/1:26,0:16:10.82:11,0,558	0/0:29,0:21:7.73:0,8,162	0/0:43,0:37:26.32:0,26,731	0/0:24,0:16:5.79:0,6,52	0/0:21,0:10:20.90:0,21,494	0/0:11,0:7:9.49:0,9,261	0/0:27,0:8:14.98:0,15,429	0/0:17,0:17:28.34:0,28,1083	0/0:114,0:78:61.01:0,61,1846	0/0:22,0:21:2.82:0,3,40	0/0:16,0:14:0.47:0,0,1	0/0:25,0:17:8.82:0,9,240	1/1:20,0:16:0.47:1,0,0	0/1:23,0:12:18.78:19,0,209	0/0:23,0:16:40.38:0,40,1177	0/0:18,0:15:2.98:0,3,164
chr10	31078837	.	T	TGAGA	278.50	PASS	AB=0.995;AC=16;AF=0.308;AN=52;BaseQRankSum=1.861;DP=754;FS=20.203;HRun=0;HaplotypeScore=112.5541;InbreedingCoeff=0.0881;MQ=28.59;MQ0=129;MQRankSum=-2.626;QD=0.90;ReadPosRankSum=-1.355;VQSLOD=0.5324;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:19:0:0,0,0	1/1:15,0:11:0.67:7,1,0	./.	0/0:28,0:1:3.01:0,3,43	./.	0/0:18,1:16:14.41:0,14,273	0/1:40,0:18:0.02:0,0,0	0/1:28,0:5:0:0,0,0	0/0:39,0:34:32.63:0,33,581	0/0:16,0:8:18.05:0,18,241	0/1:8,0:5:0:0,0,0	0/1:29,1:23:35.48:44,0,35	0/1:30,1:19:74.38:74,0,238	0/1:28,0:21:11.95:12,0,52	0/0:43,0:37:23.30:0,23,405	1/1:21,1:14:5.11:42,5,0	0/1:24,0:14:13.36:13,0,319	0/1:11,0:7:18.68:19,0,81	0/0:20,0:8:20.99:0,21,321	0/0:20,0:18:27.09:0,27,508	0/0:118,0:81:63.12:0,63,1118	0/0:22,0:21:2.79:0,3,13	0/1:17,0:14:0:1,0,0	0/0:30,0:21:9.03:0,9,168	0/1:19,0:14:0:0,0,0	0/1:22,0:11:71.46:133,0,71	0/0:24,0:16:39.07:0,39,736	0/1:14,0:11:24.95:59,0,25
chr10	31078849	.	A	AGAGAGT	645.18	PASS	AB=0.881;AC=17;AF=0.315;AN=54;BaseQRankSum=2.004;DP=800;FS=35.284;HRun=0;HaplotypeScore=116.7671;InbreedingCoeff=0.1557;MQ=29.16;MQ0=136;MQRankSum=-4.155;QD=1.90;ReadPosRankSum=-2.790;VQSLOD=-0.1896;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:32,0:23:0.09:0,0,0	0/0:10,0:8:2.10:0,2,6	./.	0/0:30,0:1:3:0,3,27	0/0:10,9:21:2.92:0,3,17	0/0:22,1:21:9.41:0,9,155	1/1:40,1:19:2.84:21,3,0	1/1:31,0:7:17.89:135,18,0	0/0:37,0:31:29.99:0,30,566	0/0:19,0:10:23.93:0,24,257	0/0:12,0:9:8.94:0,9,73	0/1:26,2:24:48.24:86,0,48	0/1:31,0:20:99:133,0,265	0/1:27,2:25:12.61:13,0,50	0/0:39,0:34:23.99:0,24,377	1/1:24,1:16:5.80:41,6,0	0/1:24,1:14:10.85:11,0,349	0/1:9,0:7:19.69:20,0,113	0/0:18,0:6:15.05:0,15,227	0/0:23,0:22:38.90:0,39,581	0/0:125,0:87:65.23:0,65,925	0/0:10,10:22:2.60:0,3,11	0/1:11,0:11:0:0,0,0	0/0:28,0:21:8.85:0,9,146	1/1:10,0:15:2.77:25,3,0	0/1:20,0:11:88.41:214,0,88	0/0:23,0:15:36.12:0,36,600	0/1:11,0:15:61.26:97,0,61
chr10	31078875	.	AGAGT	A	470.30	PASS	AB=0.981;AC=20;AF=0.370;AN=54;BaseQRankSum=-2.073;DP=840;FS=1.476;HRun=0;HaplotypeScore=116.1017;InbreedingCoeff=-0.3148;MQ=30.83;MQ0=136;MQRankSum=1.232;QD=0.79;ReadPosRankSum=-2.117;VQSLOD=1.3757;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:37,0:26:2.70:3,0,49	0/1:10,0:8:0.41:0,0,0	0/1:13,0:2:10.83:11,0,13	./.	0/0:23,0:19:6.41:0,6,63	0/1:25,0:19:36.11:36,0,64	0/0:44,0:21:2.65:0,3,37	0/0:44,0:15:26.84:0,27,171	0/1:42,0:35:33.42:80,0,33	0/0:24,0:14:29.41:0,29,337	0/0:18,1:15:15.04:0,15,187	0/0:37,0:26:2.86:0,3,102	0/1:32,0:21:5.04:5,0,205	0/1:35,0:28:15.14:16,0,15	0/1:41,0:37:21.31:21,0,57	0/1:27,0:16:0.89:1,0,56	0/1:24,0:14:17.84:18,0,179	0/1:15,0:11:2.21:2,0,80	0/1:16,0:5:36.27:36,0,36	0/1:27,0:23:40.29:140,0,40	0/1:60,65:92:2.91:60,0,3	0/0:26,0:22:8.78:0,9,126	0/0:15,0:10:3.01:0,3,50	0/1:36,0:26:14.49:14,0,36	0/1:21,0:17:7.96:8,0,88	0/1:31,0:18:46.51:47,0,310	1/1:16,0:11:11.32:107,11,0	0/1:20,0:17:7.02:7,0,28
chr10	31078877	.	AGTGT	A	202.14	PASS	AB=0.959;AC=12;AF=0.214;AN=56;BaseQRankSum=-1.547;DP=848;FS=0.000;HRun=0;HaplotypeScore=115.4173;InbreedingCoeff=-0.0951;MQ=30.66;MQ0=137;MQRankSum=-1.828;QD=0.57;ReadPosRankSum=0.754;VQSLOD=2.1896;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:26:5.91:0,6,92	1/1:10,0:8:0.47:1,0,0	0/1:15,1:2:27.03:27,0,36	0/0:19,0:2:2.99:0,3,24	0/0:21,0:17:2.92:0,3,58	0/0:21,4:19:9.95:0,10,125	0/0:41,1:21:2.94:0,3,18	0/1:45,0:15:26.66:32,0,27	1/1:39,1:34:2.49:8,2,0	0/0:25,0:16:39.11:0,39,613	0/0:19,0:15:15.05:0,15,298	0/0:33,1:23:7.33:0,7,66	0/0:29,2:20:14.87:0,15,240	0/0:33,3:28:2.99:0,3,35	0/0:43,0:38:6.86:0,7,32	0/1:26,1:16:10.19:10,0,64	0/0:24,0:15:21.96:0,22,350	0/0:15,0:11:3.01:0,3,57	0/1:14,0:5:4.95:5,0,40	0/1:23,0:22:8.60:53,0,9	0/1:126,1:94:36.94:37,0,60	0/0:28,1:24:11.31:0,11,198	0/0:13,2:10:2.95:0,3,58	0/0:35,1:26:8.09:0,8,82	0/0:21,0:17:5.72:0,6,112	0/1:29,1:18:99:111,0,396	0/1:15,0:11:19.22:47,0,19	0/0:21,0:17:1.25:0,1,3
chr10	31078919	.	T	TGTGA	1700.73	PASS	AB=0.809;AC=22;AF=0.393;AN=56;BaseQRankSum=2.447;DP=874;FS=1.362;HRun=0;HaplotypeScore=128.5788;InbreedingCoeff=0.1876;MQ=35.02;MQ0=83;MQRankSum=-1.378;QD=3.72;ReadPosRankSum=-2.586;VQSLOD=1.9117;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:25,6:28:0.76:1,0,1	1/1:6,4:10:7.36:44,7,0	0/0:52,0:5:9.03:0,9,150	0/0:53,0:7:20.91:0,21,256	1/1:17,1:17:12.50:176,13,0	0/0:17,9:21:8.13:0,8,40	1/1:44,3:27:12.32:153,12,0	1/1:30,0:15:16:182,16,0	0/0:36,0:33:36.12:0,36,656	0/1:23,0:18:76.91:106,0,77	0/1:26,0:23:19.40:19,0,51	0/1:18,9:26:36.09:194,0,36	0/1:22,0:24:3.31:93,0,3	0/1:19,12:29:3.87:64,0,4	0/0:35,0:34:27.07:0,27,431	0/1:21,17:36:56.77:115,0,57	0/0:14,7:18:5.25:0,5,40	0/1:8,7:15:59.80:60,0,72	0/0:14,0:12:29.77:0,30,415	0/0:20,0:19:21.03:0,21,274	0/0:96,0:79:54.93:0,55,582	0/1:28,3:27:6.81:41,0,7	0/1:7,5:13:0:0,0,0	0/0:21,12:31:1.82:0,2,5	0/1:19,2:20:6.81:193,0,7	0/1:28,1:23:51.20:302,0,51	0/0:24,0:21:15.19:0,15,164	1/1:11,1:9:6.02:126,6,0
chr10	31078921	.	T	TGA	592.85	PASS	AB=0.993;AC=21;AF=0.375;AN=56;BaseQRankSum=3.792;DP=861;FS=4.140;HRun=0;HaplotypeScore=123.8103;InbreedingCoeff=-0.1019;MQ=35.40;MQ0=79;MQRankSum=-0.267;QD=1.09;ReadPosRankSum=1.237;VQSLOD=2.1801;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:34,1:28:11.54:12,0,17	0/1:10,0:10:44.06:54,0,44	0/0:52,0:5:9.03:0,9,129	0/0:55,0:7:20.19:0,20,223	1/1:18,0:17:8.11:46,8,0	0/0:26,0:21:6.60:0,7,31	1/1:41,2:25:13.50:121,14,0	0/1:27,0:13:23.68:27,0,24	0/0:36,0:33:36.11:0,36,516	0/1:23,0:18:29.40:29,0,89	0/1:24,0:22:1.11:1,0,36	0/1:33,0:26:17.68:55,0,18	0/1:30,1:24:18.91:87,0,19	0/1:34,0:29:16:16,0,28	0/0:32,0:32:26.47:0,26,336	0/1:42,2:36:33.94:101,0,34	0/0:22,0:17:8.60:0,9,61	0/1:17,0:15:12.01:12,0,61	0/0:14,0:13:32.90:0,33,399	0/0:21,0:20:19.59:0,20,227	0/1:94,0:79:28.46:28,0,337	0/1:32,0:28:1:1,0,9	0/1:16,0:15:0.03:0,0,0	0/0:35,0:30:2.04:0,2,6	0/1:22,0:20:8.17:70,0,8	0/1:30,0:24:55.33:55,0,131	0/0:24,0:21:4.08:0,4,76	1/1:10,0:8:5.73:35,6,0
chr10	31078923	.	C	CGT	1720.86	PASS	AB=0.903;AC=39;AF=0.722;AN=54;BaseQRankSum=2.736;DP=873;FS=6.643;HRun=0;HaplotypeScore=125.6732;InbreedingCoeff=0.1089;MQ=35.74;MQ0=75;MQRankSum=-0.889;QD=2.57;ReadPosRankSum=-1.220;VQSLOD=1.9939;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:38,0:31:6:57,6,0	1/1:10,0:10:7.29:73,7,0	./.	0/0:57,0:8:3.01:0,3,34	1/1:16,0:15:12.01:118,12,0	1/1:25,0:21:2.90:25,3,0	1/1:45,0:27:8.66:102,9,0	1/1:26,0:14:6.97:39,7,0	0/0:35,0:34:29.88:0,30,335	0/1:22,0:17:6.48:61,0,6	0/0:24,0:22:0.72:0,1,16	0/1:32,0:25:9.32:66,0,9	1/1:29,0:23:9.86:98,10,0	1/1:34,0:29:3.48:33,3,0	0/0:32,0:32:14.86:0,15,107	0/1:44,0:36:6.32:106,0,6	1/1:23,0:17:0.47:1,0,0	0/1:17,0:15:16.98:17,0,42	1/1:15,0:14:2.45:18,2,0	0/1:15,8:22:53.01:53,0,56	0/1:94,3:82:71.09:363,0,71	1/1:31,0:27:1.81:7,2,0	1/1:15,0:14:2.99:24,3,0	1/1:38,0:33:2.99:24,3,0	1/1:23,0:21:18:165,18,0	1/1:32,0:26:20.41:164,20,0	0/1:9,15:22:13.03:214,0,13	1/1:10,0:8:5.97:46,6,0
chr10	31078942	.	G	GTGTGTGTA	745.76	PASS	AB=0.976;AC=11;AF=0.196;AN=56;BaseQRankSum=5.163;DP=789;FS=3.220;HRun=0;HaplotypeScore=178.4971;InbreedingCoeff=0.0875;MQ=44.66;MQ0=23;MQRankSum=-3.458;QD=3.75;ReadPosRankSum=4.032;VQSLOD=2.5956;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:15.24:0,15,122	0/0:11,0:11:3.71:0,4,38	0/0:37,0:16:31.72:0,32,337	0/0:45,0:24:58.82:0,59,671	0/1:14,0:14:13.36:13,0,26	0/0:21,0:19:2.87:0,3,24	0/0:42,0:35:9.99:0,10,141	0/0:29,0:27:43.37:0,43,359	0/0:29,0:26:44.57:0,45,870	0/1:18,3:19:10.53:595,0,11	1/1:19,3:21:7.29:74,7,0	0/1:30,0:28:37.07:37,0,65	0/0:27,0:24:3.57:0,4,111	0/1:32,0:31:4.31:4,0,40	0/0:32,0:32:26.11:0,26,419	0/0:43,0:36:9.76:0,10,190	0/0:21,0:18:8.85:0,9,65	0/0:17,0:15:2.13:0,2,197	0/0:11,0:11:12.88:0,13,107	0/0:17,0:17:16.78:0,17,246	0/0:88,0:78:69.63:0,70,805	0/0:32,0:30:6.18:0,6,62	0/0:19,0:18:10.89:0,11,97	0/0:39,0:38:18.44:0,18,148	0/1:23,0:23:19.14:19,0,140	0/1:22,1:21:99:121,0,123	0/1:28,0:26:0.11:0,0,157	1/1:6,0:5:4.56:17,5,0
chr10	31080595	.	AGGGCATATCAGACGG	A	3830.52	PASS	AB=0.969;AC=5;AF=0.089;AN=56;BaseQRankSum=9.413;DP=791;FS=0.666;HRun=0;HaplotypeScore=330.2289;InbreedingCoeff=0.7803;MQ=92.81;MQ0=0;MQRankSum=-6.458;QD=54.72;ReadPosRankSum=-0.812;VQSLOD=2.4578;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,141,10150	0/0:15,0:15:42.12:0,42,2851	0/0:35,0:35:99:0,99,5164	0/0:32,0:32:87.25:0,87,4985	0/0:20,0:20:54.19:0,54,3958	0/0:23,0:23:69.23:0,69,4963	0/0:24,0:24:72.25:0,72,4525	0/0:35,0:34:99:0,99,6464	0/0:27,0:27:81.25:0,81,5097	1/1:2,19:21:57.17:2179,57,0	1/1:4,14:18:39.13:1608,39,0	0/0:39,0:39:99:0,114,7222	0/0:36,0:36:99:0,105,7171	0/0:30,0:30:90.29:0,90,5814	0/0:47,0:47:99:0,141,9918	0/0:39,0:39:99:0,117,8149	0/0:33,0:33:99:0,99,7253	0/0:19,0:19:57.17:0,57,3916	0/0:14,0:14:42.14:0,42,2431	0/0:29,0:29:87.30:0,87,6057	0/0:51,0:51:99:0,154,10457	0/0:27,0:27:78.27:0,78,5599	0/0:18,0:18:48.14:0,48,2905	0/0:21,0:21:57.20:0,57,3655	0/0:25,0:25:75.22:0,75,4636	0/1:30,1:31:43.41:43,0,6211	0/0:24,0:23:72.25:0,72,4813	0/0:11,0:11:33.11:0,33,2321
chr10	31083486	.	GCC	G	18394.85	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=18.479;DP=692;FS=0.000;HRun=4;HaplotypeScore=126.5507;InbreedingCoeff=0.9902;MQ=90.35;MQ0=0;MQRankSum=-8.650;QD=39.14;ReadPosRankSum=6.000;VQSLOD=3.4090;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,37:37:99:1457,99,0	1/1:0,12:12:36.12:530,36,0	0/0:28,0:28:81.28:0,81,1480	0/0:31,0:31:90.28:0,90,1611	1/1:1,17:18:39.13:574,39,0	1/1:0,21:21:63.21:928,63,0	1/1:1,26:27:66.22:972,66,0	1/1:1,22:23:66.21:951,66,0	0/0:36,0:36:99:0,108,2016	1/1:1,17:18:51.17:751,51,0	1/1:2,15:17:39.13:573,39,0	1/1:1,34:36:90.30:1323,90,0	1/1:1,23:24:60.20:883,60,0	1/1:0,18:18:51.17:751,51,0	0/0:27,0:27:75.26:0,75,1395	1/1:0,31:31:84.28:1237,84,0	1/1:0,32:32:93.31:1369,93,0	1/1:1,33:34:93.31:1369,93,0	0/0:19,0:19:45.14:0,45,813	0/0:19,0:19:57.20:0,57,1045	0/0:42,0:42:99:0,126,2335	1/1:1,13:14:36.12:530,36,0	1/1:0,15:15:39.13:574,39,0	1/1:1,41:42:99:1503,103,0	1/1:1,22:23:63.21:928,63,0	1/1:0,24:24:72.24:1058,72,0	0/0:20,0:20:60.21:0,60,1101	1/1:0,4:4:9.03:133,9,0
chr10	31086145	.	T	TA	551.04	PASS	AB=0.741;AC=4;AF=0.071;AN=56;BaseQRankSum=-4.151;DP=581;FS=0.000;HRun=12;HaplotypeScore=61.9668;InbreedingCoeff=0.3878;MQ=71.84;MQ0=1;MQRankSum=1.069;QD=9.34;ReadPosRankSum=-2.647;VQSLOD=1.9866;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:29:57.83:0,58,459	0/0:6,0:6:14.91:0,15,109	0/0:18,0:15:15.84:0,16,114	0/0:16,0:15:5.36:0,5,118	0/0:26,0:28:62.90:0,63,433	0/0:23,1:26:27.94:0,28,341	0/0:19,1:20:24.47:0,24,338	0/0:34,0:36:67.56:0,68,484	0/0:14,0:16:31.85:0,32,225	1/1:6,18:24:10:379,10,0	0/1:6,12:19:21.76:255,0,22	0/0:13,0:15:30.88:0,31,209	0/0:19,0:20:46.73:0,47,333	0/0:25,0:26:46.64:0,47,328	0/0:26,0:27:61.65:0,62,442	0/0:20,0:22:48.69:0,49,335	0/0:20,0:21:55.73:0,56,400	0/0:15,0:15:29.75:0,30,217	0/0:20,0:21:40.68:0,41,282	0/0:34,0:34:65.48:0,65,480	0/0:15,0:15:32.63:0,33,229	0/0:13,0:14:37.79:0,38,267	0/0:27,0:29:64.56:0,65,462	0/0:22,0:23:49.66:0,50,353	0/0:13,0:15:40.80:0,41,289	0/1:13,2:16:26.44:26,0,148	0/0:20,0:20:47.47:0,47,341	0/0:8,0:8:17.88:0,18,131
chr10	31086372	.	C	CT	8818.17	PASS	AB=0.576;AC=32;AF=0.571;AN=56;BaseQRankSum=-14.320;DP=606;FS=6.273;HRun=9;HaplotypeScore=60.1101;InbreedingCoeff=0.7091;MQ=75.58;MQ0=0;MQRankSum=-1.936;QD=23.58;ReadPosRankSum=-0.741;VQSLOD=5.4352;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,27:29:78.21:863,78,0	0/1:2,8:10:5:173,0,5	0/0:16,0:16:7.51:0,8,197	0/0:17,0:17:35.92:0,36,302	1/1:5,24:29:69.08:734,69,0	1/1:3,23:26:46.14:737,46,0	1/1:4,14:18:36.10:398,36,0	1/1:6,30:36:87.18:933,87,0	0/0:23,0:23:56.95:0,57,491	0/0:28,0:28:80.97:0,81,701	0/0:31,0:31:83.90:0,84,714	1/1:4,20:24:31.36:569,31,0	1/1:3,13:16:19.03:426,19,0	0/1:5,9:15:1.17:218,0,1	0/0:2,0:27:44.81:0,45,132	1/1:1,22:24:53.20:625,53,0	1/1:6,11:17:7.01:290,7,0	1/1:2,15:17:39.11:431,39,0	0/0:18,1:19:5.78:0,6,279	0/0:22,0:24:65.49:0,65,553	0/0:18,0:18:44.83:0,45,376	1/1:1,11:12:33.09:365,33,0	1/1:3,15:18:10.04:339,10,0	0/1:5,17:22:20.43:428,0,20	1/1:7,19:26:22.08:472,22,0	0/1:7,17:24:87.13:485,0,87	0/0:27,0:28:72.96:0,73,596	1/1:0,11:11:30.08:332,30,0
chr10	31087584	.	GTT	G	2673.05	PASS	AB=0.708;AC=36;AF=0.643;AN=56;BaseQRankSum=2.335;DP=544;FS=4.180;HRun=18;HaplotypeScore=71.6776;InbreedingCoeff=0.4038;MQ=68.31;MQ0=2;MQRankSum=0.849;QD=6.33;ReadPosRankSum=7.047;VQSLOD=-0.4637;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:15,9:26:75.06:106,0,75	1/1:1,1:3:5.59:34,6,0	0/0:19,0:11:4.50:0,4,22	0/0:8,0:5:5.95:0,6,43	1/1:8,8:18:26.64:184,27,0	1/1:5,10:19:14.08:126,14,0	1/1:4,4:11:11.13:104,11,0	1/1:12,17:35:20.51:230,21,0	0/0:21,0:23:41.26:0,41,369	0/0:15,0:21:40.10:0,40,356	0/0:17,2:22:7.62:0,8,388	1/1:10,12:23:37.99:280,38,0	1/1:9,6:18:16.50:101,16,0	1/1:7,8:18:1.30:129,1,0	0/0:17,0:19:44.12:0,44,345	1/1:6,8:17:31.42:202,31,0	1/1:12,11:27:32.43:222,32,0	1/1:9,13:25:19.89:171,20,0	0/1:21,1:22:13.92:14,0,65	0/1:17,4:30:51.82:52,0,94	0/0:1,0:9:7.73:0,8,40	0/1:7,6:15:7.65:70,0,8	1/1:11,11:24:6.01:166,6,0	1/1:7,13:20:20.30:193,20,0	1/1:10,9:21:10.89:114,11,0	0/1:12,10:23:25.52:194,0,26	0/1:4,3:12:45.74:46,0,49	1/1:4,8:12:11.74:125,12,0
chr10	31093838	.	AGGG	A	10599.17	PASS	AB=0.952;AC=37;AF=0.661;AN=56;BaseQRankSum=-8.032;DP=596;FS=2.226;HRun=12;HaplotypeScore=100.9703;InbreedingCoeff=0.8760;MQ=73.08;MQ0=1;MQRankSum=-2.070;QD=24.59;ReadPosRankSum=7.406;VQSLOD=3.5635;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:12,27:40:78.11:962,78,0	1/1:0,4:4:6.02:76,6,0	0/0:26,0:21:32.68:0,33,345	0/1:19,0:16:23.21:23,0,221	1/1:6,19:26:49.71:641,50,0	1/1:3,11:14:24.05:303,24,0	1/1:8,24:32:69.18:868,69,0	1/1:10,9:19:27:329,27,0	0/0:9,0:15:9.01:0,9,142	0/0:12,0:19:17.43:0,17,120	0/0:5,0:9:14.78:0,15,119	1/1:5,26:32:79.83:1017,80,0	1/1:4,20:24:56.91:717,57,0	1/1:5,19:24:60.18:752,60,0	0/0:19,0:23:21.05:0,21,366	1/1:2,24:26:66.19:833,66,0	1/1:5,21:25:60.18:755,60,0	1/1:6,18:25:49.36:641,49,0	0/0:9,0:13:20.95:0,21,198	0/0:10,0:15:11.28:0,11,145	0/0:12,0:21:13.22:0,13,115	1/1:8,12:20:36.10:453,36,0	1/1:8,13:21:27.07:338,27,0	1/1:4,16:20:45.11:569,45,0	1/1:4,14:18:30.05:379,30,0	1/1:8,23:32:46.14:792,46,0	0/0:12,0:24:44.81:0,45,379	1/1:3,5:8:12.02:151,12,0
chr10	31093848	.	GGGT	G	4369.61	PASS	AB=0.976;AC=26;AF=0.464;AN=56;BaseQRankSum=10.510;DP=556;FS=16.832;HRun=0;HaplotypeScore=114.4521;InbreedingCoeff=0.1704;MQ=71.24;MQ0=1;MQRankSum=-0.277;QD=10.84;ReadPosRankSum=13.048;VQSLOD=1.7849;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:36,1:37:58.01:316,0,58	1/1:4,0:4:5.64:27,6,0	0/0:22,0:18:7.92:0,8,325	0/0:19,0:16:4.50:0,4,401	1/1:21,1:22:26.90:296,27,0	0/1:16,0:16:83.33:100,0,83	0/1:30,1:31:30.55:343,0,31	0/1:24,0:24:77.65:78,0,311	0/0:10,0:10:12.01:0,12,183	0/0:13,0:13:30.80:0,31,295	0/0:7,0:7:17.56:0,18,155	0/1:33,2:35:10.34:455,0,10	0/1:24,1:25:19.45:316,0,19	1/1:21,3:24:23.40:373,23,0	0/0:14,0:14:32.67:0,33,505	1/1:27,0:27:2.04:340,2,0	1/1:24,2:26:1:315,1,0	1/1:20,2:22:19.15:312,19,0	0/0:10,0:10:29.65:0,30,284	0/0:12,0:12:32.36:0,32,354	0/0:18,0:18:35.65:0,36,312	1/1:15,3:18:12.90:234,13,0	0/1:16,1:17:34.58:141,0,35	0/1:19,0:19:16.53:199,0,17	1/1:15,0:15:13.02:133,13,0	0/1:32,1:33:99:339,0,169	0/0:27,0:27:65.08:0,65,703	0/1:8,0:8:29.11:54,0,29
chr10	31096524	.	G	GTT	2610	PASS	AB=0.593;AC=11;AF=0.196;AN=56;BaseQRankSum=-3.547;DP=662;FS=5.093;HRun=12;HaplotypeScore=99.5985;InbreedingCoeff=0.8629;MQ=66.09;MQ0=11;MQRankSum=0.381;QD=18.25;ReadPosRankSum=-3.605;VQSLOD=2.1855;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:30:64.63:0,65,655	0/0:7,0:8:23.67:0,24,186	0/0:36,0:14:28.42:0,28,222	0/0:36,1:14:10.54:0,11,108	0/0:35,0:36:67.50:0,68,644	0/0:25,0:28:53.35:0,53,512	0/0:15,0:18:38.35:0,38,376	0/0:36,0:38:47.37:0,47,431	0/0:18,0:19:46.96:0,47,383	1/1:14,6:19:36.09:441,36,0	1/1:3,9:13:2.25:284,2,0	0/0:22,0:22:40.30:0,40,324	0/0:22,0:24:50.26:0,50,431	0/0:16,0:16:41.08:0,41,330	0/0:22,0:25:33.53:0,34,411	0/0:26,0:25:24.35:0,24,456	0/0:10,0:10:29.48:0,29,245	0/0:10,0:11:14.78:0,15,183	1/1:20,2:19:42.34:467,42,0	1/1:13,24:41:73.98:805,74,0	0/1:5,4:15:3.96:208,0,4	0/0:25,0:28:41.21:0,41,395	0/0:23,0:23:35.47:0,35,370	0/0:19,0:21:41.70:0,42,463	0/0:22,0:26:37.73:0,38,397	0/0:18,0:20:34.71:0,35,263	1/1:23,7:29:30.84:576,31,0	0/0:14,0:15:28.23:0,28,238
chr10	31097184	.	GGTGTGTGTGTGTGT	G	4024.13	PASS	AB=0.760;AC=24;AF=0.500;AN=48;BaseQRankSum=5.285;DP=405;FS=25.673;HRun=0;HaplotypeScore=163.5202;InbreedingCoeff=0.6440;MQ=69.20;MQ0=19;MQRankSum=-6.888;QD=30.03;ReadPosRankSum=3.282;VQSLOD=1.4353;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	1/1:2,3:4:9.03:283,9,0	0/0:30,0:23:12.04:0,12,415	0/0:37,0:24:21.07:0,21,879	0/0:6,8:13:0.47:0,0,1	./.	1/1:4,6:11:6.02:231,6,0	0/1:14,0:14:21.98:22,0,160	0/0:11,0:11:24.08:0,24,1325	0/0:22,0:21:51.18:0,51,2361	0/0:19,0:19:20.99:0,21,1078	1/1:4,11:15:15.05:505,15,0	1/1:1,3:6:12.04:468,12,0	1/1:3,6:10:9.03:346,9,0	0/0:20,0:19:45.14:0,45,2027	0/1:1,9:13:99:274,0,167	1/1:4,8:12:5.52:233,6,0	1/1:4,7:10:9.03:354,9,0	0/0:22,0:21:38.16:0,38,2046	0/0:21,0:21:29.83:0,30,1309	0/0:19,0:18:26.91:0,27,831	1/1:1,7:9:0.89:2,1,0	1/1:3,3:7:0.47:1,0,0	./.	./.	1/1:2,10:13:33.11:1215,33,0	0/0:18,0:18:38.16:0,38,1712	1/1:3,1:2:3.01:92,3,0
chr10	31097424	.	TAA	T	11310.71	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=10.479;DP=630;FS=8.298;HRun=11;HaplotypeScore=109.5961;InbreedingCoeff=0.9553;MQ=67.73;MQ0=0;MQRankSum=-4.892;QD=26.00;ReadPosRankSum=1.316;VQSLOD=4.1549;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,35:40:93.21:988,93,0	1/1:0,8:8:24.06:255,24,0	0/0:17,0:17:20.95:0,21,269	0/0:11,0:10:8.94:0,9,109	1/1:1,27:28:75.14:787,75,0	1/1:3,24:27:69.08:710,69,0	1/1:3,26:29:69.16:734,69,0	1/1:9,27:36:81.01:828,81,0	0/0:18,0:18:45.14:0,45,668	0/0:3,1:15:1.67:0,2,94	0/0:5,0:24:22.31:0,22,155	1/1:4,20:25:50.82:509,51,0	1/1:0,21:21:51.13:542,51,0	1/1:3,32:35:96.19:1009,96,0	0/0:24,0:24:69.21:0,69,1020	1/1:4,31:34:84.19:894,84,0	1/1:6,23:31:71.62:726,72,0	1/1:1,24:25:72.18:766,72,0	0/0:24,1:25:37.30:0,37,942	0/0:15,0:17:49.44:0,49,657	0/0:23,0:23:51.16:0,51,764	1/1:0,11:11:33:327,33,0	1/1:1,11:12:30.06:319,30,0	1/1:0,22:23:65.90:683,66,0	1/1:0,21:21:60.11:626,60,0	1/1:3,15:18:42.10:447,42,0	0/0:20,0:20:57.15:0,57,850	1/1:2,8:10:15:160,15,0
chr10	31097605	.	T	TTATC	23875.98	PASS	AB=0.537;AC=35;AF=0.625;AN=56;BaseQRankSum=7.570;DP=623;FS=14.362;HRun=0;HaplotypeScore=143.2064;InbreedingCoeff=0.9246;MQ=82.13;MQ0=0;MQRankSum=-17.278;QD=62.83;ReadPosRankSum=1.900;VQSLOD=6.2011;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,26:31:75.26:1938,75,0	1/1:2,8:10:24.08:633,24,0	0/0:29,0:29:80.85:0,81,1421	0/0:19,0:19:54.18:0,54,972	1/1:2,35:39:87.30:2149,87,0	1/1:1,21:23:63.22:1651,63,0	1/1:1,16:19:48.16:1240,48,0	1/1:5,15:26:75.20:1773,75,0	0/0:19,0:19:54.19:0,54,1007	0/0:30,0:30:81.24:0,81,1372	0/0:23,0:23:63.18:0,63,1085	1/1:2,18:22:45.15:1196,45,0	1/1:1,17:22:48.16:1272,48,0	1/1:6,21:28:72.25:1873,72,0	0/0:26,0:26:69.22:0,69,1256	1/1:3,25:28:26.34:1858,26,0	1/1:5,11:16:30.10:788,30,0	1/1:1,4:6:15.05:399,15,0	0/0:19,0:19:57.17:0,57,973	0/0:29,0:29:81.24:0,81,1420	0/0:25,0:25:75.19:0,75,1300	1/1:0,18:20:48.16:1270,48,0	1/1:0,16:16:45.15:1147,45,0	1/1:0,9:11:27.09:704,27,0	1/1:2,13:15:36.12:933,36,0	0/1:5,29:36:12.69:2239,0,13	0/0:24,0:24:72.23:0,72,1284	1/1:4,8:12:33.07:815,33,0
chr10	31098125	.	CTG	C	419.33	PASS	AB=0.996;AC=9;AF=0.161;AN=56;BaseQRankSum=5.693;DP=709;FS=21.288;HRun=0;HaplotypeScore=169.5687;InbreedingCoeff=0.0343;MQ=50.83;MQ0=22;MQRankSum=-2.254;QD=1.74;ReadPosRankSum=3.042;VQSLOD=0.6577;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,2:34:44.48:0,44,552	0/0:7,1:8:8.54:0,9,103	0/1:37,0:17:19.97:20,0,80	0/1:75,0:16:36.58:37,0,50	0/0:13,2:15:9.29:0,9,197	0/0:32,2:33:41.53:0,42,519	0/0:21,0:21:26.86:0,27,364	0/0:43,0:39:99:0,110,1103	0/0:25,0:26:43.15:0,43,812	0/1:22,0:22:80.32:117,0,80	0/1:15,0:15:10.98:25,0,11	0/0:16,2:18:2.08:0,2,233	0/0:24,0:23:53.56:0,54,659	0/0:16,2:17:21:0,21,235	0/0:28,0:28:71.75:0,72,933	0/0:22,2:24:13.94:0,14,344	0/0:13,1:14:7.89:0,8,561	0/0:13,1:14:1.74:0,2,437	0/1:27,0:20:12.45:151,0,12	1/1:13,0:12:14.07:75,14,0	0/1:25,0:24:28.55:29,0,75	0/0:21,2:23:21.04:0,21,315	0/0:20,1:21:32.90:0,33,495	0/0:34,0:33:24.03:0,24,345	0/0:20,2:21:20.40:0,20,402	0/0:31,0:30:74.31:0,74,1027	0/1:24,0:23:28.52:108,0,29	0/0:15,0:15:30.76:0,31,399
chr10	31098127	.	GTC	G	1681.67	PASS	AB=1.000;AC=16;AF=0.286;AN=56;BaseQRankSum=0.752;DP=704;FS=11.318;HRun=0;HaplotypeScore=164.0433;InbreedingCoeff=0.6348;MQ=49.03;MQ0=23;MQRankSum=-0.768;QD=6.42;ReadPosRankSum=0.704;VQSLOD=2.7540;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:34:20.63:0,21,296	0/0:8,0:8:2.78:0,3,46	0/0:31,0:15:5.81:0,6,59	0/1:81,0:17:0.64:1,0,33	0/1:15,0:15:20.06:20,0,108	0/0:34,0:33:23.30:0,23,286	0/0:21,0:21:18.03:0,18,215	0/0:41,0:37:53.99:0,54,638	0/0:25,0:25:56.91:0,57,812	1/1:12,9:22:38.77:467,39,0	1/1:5,11:16:12.02:130,12,0	0/1:18,0:18:2.90:3,0,138	0/0:24,0:23:31.71:0,32,430	0/0:18,0:17:8.96:0,9,93	0/0:27,0:27:51.17:0,51,806	0/0:22,0:22:10.90:0,11,248	0/0:14,0:14:18.12:0,18,380	0/0:14,0:14:11.47:0,11,298	1/1:8,19:20:48.56:555,49,0	1/1:1,12:12:15.05:184,15,0	1/1:7,18:24:12.04:148,12,0	0/0:23,0:23:15.04:0,15,215	0/0:23,0:23:24.05:0,24,333	0/0:34,0:33:15.05:0,15,234	0/1:22,0:21:9.28:9,0,250	0/0:30,0:29:60.16:0,60,767	1/1:5,18:22:29.99:348,30,0	0/0:15,0:15:29.84:0,30,283
chr10	31098147	.	GTC	G	805.28	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=1.495;DP=646;FS=0.000;HRun=0;HaplotypeScore=152.0527;InbreedingCoeff=-0.0204;MQ=44.15;MQ0=11;MQRankSum=-3.916;QD=2.38;ReadPosRankSum=-3.569;VQSLOD=1.6254;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:27:2.38:15,2,0	0/1:6,0:6:0.18:0,0,0	0/0:30,0:8:8.05:0,8,77	0/0:70,0:13:5.70:0,6,185	0/0:15,0:15:3:0,3,29	0/1:27,0:27:14.83:15,0,44	0/1:13,0:13:0:0,0,0	0/1:38,0:35:99:187,0,259	0/0:30,0:30:57.14:0,57,901	1/1:15,7:22:37.14:392,37,0	1/1:10,10:20:6:61,6,0	1/1:14,0:14:2.99:23,3,0	0/1:17,0:16:18.86:19,0,112	0/1:15,0:14:14.92:25,0,15	0/0:28,0:28:75.19:0,75,1106	0/1:22,0:22:8.72:9,0,91	0/1:12,0:12:31.82:32,0,45	0/1:11,0:11:43.69:44,0,50	0/0:25,0:21:32.31:0,32,200	0/0:20,0:19:35.06:0,35,380	0/0:28,0:27:18.96:0,19,172	0/1:25,0:24:15.37:15,0,43	0/1:25,0:25:12.77:13,0,94	0/0:28,0:27:6:0,6,55	0/1:22,0:21:38.47:38,0,64	0/1:22,0:21:77.47:77,0,148	0/0:17,0:17:8.76:0,9,63	0/0:15,0:15:11.39:0,11,74
chr10	31098157	.	C	CTG	111.55	PASS	AB=0.985;AC=10;AF=0.179;AN=56;BaseQRankSum=0.553;DP=665;FS=0.000;HRun=0;HaplotypeScore=160.7208;InbreedingCoeff=-0.0948;MQ=42.47;MQ0=18;MQRankSum=0.325;QD=0.65;ReadPosRankSum=-4.546;VQSLOD=1.1664;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:21:2.21:11,2,0	0/0:6,0:6:4.14:0,4,22	0/0:42,0:7:9:0,9,98	0/0:83,0:18:29.51:0,30,294	0/0:18,0:18:2.98:0,3,22	0/1:24,0:24:12.38:12,0,51	0/1:12,0:12:14.11:18,0,14	0/0:31,0:31:57.79:0,58,583	0/0:27,0:27:60.19:0,60,890	0/1:19,3:22:99:113,0,111	0/0:16,7:23:2.60:0,3,11	0/0:12,0:12:5.94:0,6,42	0/1:18,0:17:18.58:19,0,112	0/1:13,0:12:14.98:15,0,26	0/0:30,0:30:81.23:0,81,1170	0/0:26,0:26:13.21:0,13,150	0/1:11,0:11:17.79:18,0,45	0/0:12,0:12:13.94:0,14,94	0/0:25,0:21:46.62:0,47,607	0/0:22,0:21:41.84:0,42,561	0/0:26,0:25:27.06:0,27,369	0/0:28,0:27:5.36:0,5,41	0/1:25,0:25:10.40:10,0,93	0/0:25,0:24:11.78:0,12,74	0/1:25,0:24:30.75:31,0,64	0/0:21,0:20:13.38:0,13,239	0/0:19,0:19:36.09:0,36,494	0/0:15,0:15:21.25:0,21,150
chr10	31098159	.	CTG	C	562.66	PASS	AB=0.891;AC=10;AF=0.179;AN=56;BaseQRankSum=3.926;DP=662;FS=10.617;HRun=0;HaplotypeScore=153.6241;InbreedingCoeff=0.0346;MQ=42.20;MQ0=16;MQRankSum=-5.252;QD=3.65;ReadPosRankSum=1.203;VQSLOD=2.4273;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:17,4:20:5.98:0,6,47	0/0:4,2:6:4.09:0,4,27	0/0:46,0:7:2.23:0,2,101	0/0:84,0:19:6.42:0,6,301	0/0:15,4:19:3.01:0,3,53	0/0:22,2:24:8.68:0,9,125	0/0:7,4:11:5.85:0,6,48	0/1:25,7:31:99:378,0,371	0/0:27,0:27:59.76:0,60,1011	1/1:21,0:21:1.88:151,2,0	1/1:23,0:23:2.53:12,3,0	0/1:8,2:10:11.98:35,0,12	0/0:16,0:15:15.93:0,16,224	0/0:13,2:14:5.38:0,5,56	0/0:30,0:30:80.82:0,81,1291	0/1:22,4:26:24.22:24,0,188	0/1:8,1:9:26.05:26,0,130	0/1:11,1:12:7.48:7,0,182	0/0:25,0:21:47.82:0,48,462	0/0:21,0:20:38.86:0,39,537	0/0:26,0:25:27.02:0,27,329	0/0:23,5:27:12.01:0,12,149	0/0:18,6:24:14.85:0,15,207	0/0:25,0:24:11.59:0,12,105	0/0:24,2:25:14.95:0,15,196	0/1:21,0:20:60.67:61,0,372	0/0:19,0:19:35.68:0,36,326	0/0:15,0:15:17.60:0,18,163
chr10	31098167	.	CTA	C	1179.43	PASS	AB=1.000;AC=23;AF=0.426;AN=54;BaseQRankSum=3.269;DP=629;FS=9.675;HRun=0;HaplotypeScore=140.4902;InbreedingCoeff=0.0088;MQ=41.97;MQ0=13;MQRankSum=-4.679;QD=3.82;ReadPosRankSum=-3.711;VQSLOD=1.2726;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:14:2.99:23,3,0	1/1:6,0:6:3:26,3,0	0/0:51,0:7:7.58:0,8,119	0/0:78,0:21:7.42:0,7,471	0/0:20,0:20:2.99:0,3,23	0/1:19,0:19:15.48:20,0,15	1/1:9,0:9:3:25,3,0	0/1:29,0:29:74.59:432,0,75	0/0:30,0:30:63.55:0,64,1060	1/1:9,16:25:33.06:371,33,0	1/1:12,12:24:3:25,3,0	0/1:10,0:10:10.70:35,0,11	0/0:15,0:15:11.10:0,11,54	./.	0/0:30,0:30:80.50:0,81,1355	0/1:25,0:25:27.55:28,0,58	0/1:6,0:6:36.73:37,0,50	0/1:10,0:10:18.76:59,0,19	0/0:19,0:17:16.74:0,17,235	0/0:20,0:19:10.24:0,10,250	0/1:27,0:26:1.12:1,0,137	0/0:23,0:22:2.95:0,3,25	0/1:23,0:23:13.46:13,0,47	1/1:24,0:23:5.99:48,6,0	0/1:23,0:22:16.04:16,0,35	0/1:16,0:15:99:114,0,103	0/0:21,0:18:13.31:0,13,210	0/1:18,0:18:9.14:70,0,9
chr10	31098177	.	CTCTG	C	508.54	PASS	AB=0.859;AC=14;AF=0.318;AN=44;BaseQRankSum=2.012;DP=575;FS=2.766;HRun=0;HaplotypeScore=139.8029;InbreedingCoeff=0.0663;MQ=47.84;MQ0=12;MQRankSum=-3.772;QD=2.38;ReadPosRankSum=-3.632;VQSLOD=0.9051;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/1:3,2:5:0.28:0,0,0	0/1:56,0:13:13.28:13,0,64	0/0:76,0:28:24.36:0,24,540	./.	0/1:8,5:13:0.31:0,0,0	0/1:5,1:6:0:0,0,0	0/1:21,1:22:99:132,0,425	0/0:30,0:30:41.14:0,41,1472	0/0:24,0:24:52.91:0,53,709	./.	0/0:8,2:10:5.88:0,6,42	0/1:9,4:13:26.53:133,0,27	./.	0/0:30,0:30:77.72:0,78,1839	0/1:19,6:25:99:100,0,139	0/1:5,0:5:3.76:4,0,17	0/0:5,1:6:11.65:0,12,76	0/0:15,0:12:21.07:0,21,425	0/0:24,0:22:33.05:0,33,769	0/0:22,0:21:17.89:0,18,418	./.	1/1:15,6:21:2.98:22,3,0	./.	1/1:15,5:20:3:25,3,0	0/1:11,1:12:49.52:104,0,50	0/0:20,0:17:30.08:0,30,629	0/1:13,3:16:95.85:100,0,96
chr10	31098199	.	C	CTCTCTG	155.60	PASS	AB=0.950;AC=8;AF=0.200;AN=40;BaseQRankSum=3.586;DP=532;FS=6.442;HRun=0;HaplotypeScore=121.9072;InbreedingCoeff=-0.0296;MQ=65.36;MQ0=13;MQRankSum=-1.031;QD=1.14;ReadPosRankSum=-1.341;VQSLOD=1.6825;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:5,0:5:0.47:0,0,1	0/1:62,0:23:17.82:18,0,247	0/0:82,0:37:35.49:0,35,388	./.	0/1:13,0:12:0.01:0,0,0	0/0:6,0:6:0:0,0,1	0/1:12,0:12:20.67:21,0,46	0/0:30,0:30:68.92:0,69,1412	0/0:24,0:23:43.21:0,43,852	./.	0/1:7,0:7:10.98:11,0,29	0/0:10,0:10:4.23:0,4,49	./.	0/0:33,0:33:84.27:0,84,1837	0/1:25,0:24:26.25:26,0,60	0/1:3,0:3:11.23:11,0,12	0/0:5,0:5:8.60:0,9,77	0/0:18,0:13:27:0,27,398	0/0:24,0:19:24.07:0,24,529	0/0:17,0:16:15.05:0,15,346	./.	./.	./.	./.	0/1:3,0:3:9.02:9,0,45	0/0:18,0:13:12.04:0,12,268	0/1:2,8:12:4.86:170,0,5
chr10	31098225	.	G	GTC	1182.65	PASS	AB=1.000;AC=14;AF=0.350;AN=40;BaseQRankSum=2.229;DP=396;FS=0.796;HRun=0;HaplotypeScore=77.6275;InbreedingCoeff=0.5835;MQ=64.66;MQ0=16;MQRankSum=-2.673;QD=10.47;ReadPosRankSum=-1.738;VQSLOD=3.0067;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:8:1.25:0,1,3	0/0:3,0:3:0.27:0,0,0	0/0:35,0:18:5.68:0,6,149	0/0:56,0:24:9.88:0,10,96	./.	0/1:7,0:6:0:0,0,0	0/1:5,0:5:0.13:0,0,0	0/0:15,0:14:17.28:0,17,437	0/0:25,0:25:60.44:0,60,766	1/1:8,9:14:28.33:428,28,0	./.	0/1:9,0:9:4.53:5,0,34	0/0:7,0:6:12:0,12,119	./.	0/0:27,0:27:69.23:0,69,915	0/0:12,0:13:8.92:0,9,119	./.	0/0:5,0:5:6.02:0,6,72	1/1:7,10:14:27.08:408,27,0	1/1:4,15:15:12.02:187,12,0	1/1:10,3:12:9:101,9,0	./.	./.	./.	./.	0/0:4,0:4:8.98:0,9,99	1/1:1,12:8:12.04:186,12,0	0/1:12,0:12:8:8,0,62
chr10	31098245	.	CTCTG	C	207.18	PASS	AB=0.967;AC=21;AF=0.477;AN=44;BaseQRankSum=5.299;DP=372;FS=11.017;HRun=0;HaplotypeScore=81.3903;InbreedingCoeff=0.2778;MQ=36.83;MQ0=26;MQRankSum=-4.090;QD=1.38;ReadPosRankSum=-4.364;VQSLOD=-0.7655;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:12,0:9:1.55:4,2,0	1/1:7,1:8:6.24:51,6,0	0/0:7,0:1:2.37:0,2,8	0/0:22,0:7:5.58:0,6,36	0/0:20,3:22:0:0,0,0	0/0:11,1:11:2.03:0,2,6	0/1:5,0:5:0:0,0,0	1/1:12,2:12:6.45:62,6,0	0/0:23,0:23:60.20:0,60,1534	0/0:16,0:11:16.40:0,16,50	0/0:16,0:15:0:0,0,0	1/1:15,0:13:8.59:46,9,0	1/1:10,0:8:9.03:31,9,0	./.	0/0:25,0:25:60.21:0,60,1469	0/1:12,3:14:14.97:15,0,74	0/0:6,0:3:4.96:0,5,18	1/1:8,0:6:1.77:4,2,0	0/1:16,0:10:10.55:21,0,11	1/1:20,0:16:0.94:21,1,0	./.	./.	./.	./.	./.	1/1:4,0:4:5.13:48,5,0	0/1:14,0:8:15.75:16,0,25	0/1:9,0:9:19.92:20,0,37
chr10	31098247	.	CTG	C	993.63	PASS	AB=0.788;AC=21;AF=0.500;AN=42;BaseQRankSum=4.454;DP=352;FS=14.117;HRun=0;HaplotypeScore=71.8137;InbreedingCoeff=0.3313;MQ=31.63;MQ0=25;MQRankSum=-6.244;QD=6.41;ReadPosRankSum=-2.589;VQSLOD=0.7457;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,6:9:0.47:1,0,0	1/1:7,1:8:0.43:2,0,0	0/0:4,0:1:2.22:0,2,7	0/0:15,0:2:5.84:0,6,39	0/0:18,6:23:0:0,0,0	0/0:8,4:11:2.03:0,2,6	0/1:2,3:5:0:0,0,0	1/1:10,3:11:20.77:210,21,0	0/0:23,0:23:60.19:0,60,1118	1/1:4,12:11:27.52:377,28,0	./.	0/1:12,2:12:7.77:30,0,8	1/1:8,2:8:2.86:21,3,0	./.	0/0:22,0:22:60.21:0,60,1135	0/1:12,4:15:10.02:10,0,69	0/0:5,1:3:5.82:0,6,35	0/1:7,1:6:15.50:15,0,22	1/1:7,10:11:18.06:253,18,0	1/1:5,14:15:5.60:57,6,0	./.	./.	./.	./.	./.	0/1:2,1:3:3.16:54,0,3	1/1:5,9:7:9.01:94,9,0	0/0:10,0:10:0.43:0,0,49
chr10	31098249	.	G	GTC	448.05	PASS	AB=0.926;AC=17;AF=0.447;AN=38;BaseQRankSum=4.877;DP=359;FS=16.258;HRun=0;HaplotypeScore=74.4501;InbreedingCoeff=0.4392;MQ=31.00;MQ0=28;MQRankSum=-4.174;QD=3.77;ReadPosRankSum=-4.052;VQSLOD=-0.4232;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:11:1.25:0,1,3	1/1:5,3:8:6.28:51,6,0	./.	./.	./.	0/1:10,3:12:0.03:1,0,0	0/1:5,0:5:0:0,0,0	1/1:15,0:13:1.14:144,1,0	0/0:23,0:23:57.19:0,57,781	0/0:16,0:11:21.97:0,22,93	0/1:16,0:14:0:0,0,0	1/1:13,2:13:5.91:69,6,0	1/1:10,1:9:13.04:96,13,0	./.	0/0:22,0:22:54.16:0,54,724	0/1:15,1:15:35.33:47,0,35	0/1:6,1:4:5.03:47,0,5	1/1:7,1:6:6.02:88,6,0	0/0:15,0:9:12.79:0,13,53	0/0:16,0:12:2.96:0,3,19	./.	./.	./.	./.	./.	1/1:5,0:5:5.78:31,6,0	0/0:14,0:7:5.73:0,6,37	0/0:9,0:9:2.67:0,3,6
chr10	31098251	.	CTCTG	C	274.69	PASS	AB=0.979;AC=17;AF=0.425;AN=40;BaseQRankSum=4.758;DP=361;FS=8.312;HRun=0;HaplotypeScore=75.0429;InbreedingCoeff=0.4173;MQ=30.86;MQ0=28;MQRankSum=-4.041;QD=2.75;ReadPosRankSum=-2.117;VQSLOD=0.3894;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:12:1.55:4,2,0	1/1:8,0:8:1.79:4,2,0	./.	./.	0/0:22,1:22:0:0,0,0	0/0:13,0:12:2.19:0,2,4	0/1:5,0:5:0:0,0,0	0/0:15,0:13:4.09:0,4,194	0/0:24,0:23:57.18:0,57,1438	0/0:17,0:11:25.24:0,25,183	0/0:16,0:14:0:0,0,0	1/1:16,1:15:5.88:44,6,0	1/1:9,3:9:9:120,9,0	./.	0/0:22,0:22:54.15:0,54,1268	0/1:14,1:14:8.50:9,0,68	1/1:6,0:3:3.35:16,3,0	1/1:7,0:6:5.38:43,5,0	0/0:15,0:9:16.01:0,16,159	0/0:17,0:13:2.88:0,3,15	./.	./.	./.	./.	./.	0/1:5,0:5:16.04:60,0,16	0/0:14,0:7:5.73:0,6,76	1/1:7,2:9:4.97:99,5,0
chr10	31098261	.	C	CTA	198.76	PASS	AB=0.890;AC=11;AF=0.275;AN=40;BaseQRankSum=3.023;DP=406;FS=2.817;HRun=0;HaplotypeScore=85.3964;InbreedingCoeff=0.2978;MQ=29.54;MQ0=35;MQRankSum=-1.392;QD=1.55;ReadPosRankSum=0.037;VQSLOD=1.8142;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:17,1:13:1.25:0,1,3	0/1:7,3:10:1.31:42,0,1	./.	./.	./.	0/0:14,3:16:1.63:0,2,4	./.	0/0:15,0:12:29.85:0,30,337	0/0:25,0:24:57.09:0,57,871	0/0:19,0:13:29.80:0,30,354	0/1:15,0:13:0:0,0,0	1/1:15,4:16:2.82:55,3,0	1/1:9,2:8:11.88:112,12,0	./.	0/0:19,0:19:48.16:0,48,734	0/1:14,2:13:3.31:3,0,40	0/0:10,0:7:0.77:0,1,2	0/0:9,0:7:0.54:0,1,24	0/0:19,0:12:23.62:0,24,272	0/0:22,0:18:2.77:0,3,18	0/1:16,0:11:0:0,0,0	0/1:16,4:19:0:0,0,0	./.	./.	./.	0/1:7,2:8:64.25:89,0,64	0/0:18,0:11:8.68:0,9,88	0/1:11,1:11:4.79:5,0,25
chr10	31098263	.	CTG	C	201.29	PASS	AB=0.939;AC=15;AF=0.341;AN=44;BaseQRankSum=4.996;DP=402;FS=3.853;HRun=0;HaplotypeScore=81.3863;InbreedingCoeff=0.2832;MQ=29.53;MQ0=35;MQRankSum=-4.086;QD=1.43;ReadPosRankSum=-0.687;VQSLOD=1.5626;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:16,3:13:0.47:1,0,0	1/1:9,1:10:0.41:21,0,0	./.	./.	0/0:19,4:21:0:0,0,0	0/0:16,3:18:1.68:0,2,3	0/0:5,0:5:0.47:0,0,1	0/0:15,0:12:25.27:0,25,279	0/0:25,0:24:57.01:0,57,921	0/1:18,0:12:4.71:5,0,96	./.	1/1:18,1:16:5.82:35,6,0	1/1:11,0:8:11.79:98,12,0	./.	0/0:19,0:19:49:0,49,825	0/1:14,3:14:8.67:9,0,20	1/1:11,0:8:6.02:27,6,0	0/0:8,0:6:1.99:0,2,18	0/0:17,0:10:11.65:0,12,151	0/0:22,0:18:2.03:0,2,6	0/0:17,0:11:0:0,0,0	0/0:20,1:20:0:0,0,0	./.	./.	0/1:17,1:17:0:0,0,0	0/1:8,1:8:16.74:60,0,17	0/0:17,0:11:8.48:0,8,51	0/1:9,0:8:10.75:65,0,11
chr10	31098269	.	C	CTG	270.34	PASS	AB=0.857;AC=16;AF=0.348;AN=46;BaseQRankSum=2.873;DP=436;FS=2.350;HRun=0;HaplotypeScore=90.9401;InbreedingCoeff=0.2285;MQ=28.73;MQ0=40;MQRankSum=-2.973;QD=1.31;ReadPosRankSum=-1.114;VQSLOD=1.3165;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,2:16:1.25:0,1,3	0/1:7,4:11:19.27:43,0,19	./.	./.	./.	1/1:16,5:19:3.15:14,3,0	1/1:4,2:5:0.47:1,0,0	0/0:13,0:11:9.48:0,9,176	0/0:22,0:21:48.02:0,48,668	0/0:18,0:13:23.32:0,23,279	0/1:15,0:12:0:0,0,0	0/1:19,2:18:11.72:46,0,12	1/1:8,5:10:17.05:144,17,0	./.	0/0:17,0:17:42.13:0,42,618	0/0:13,4:14:2.65:0,3,19	0/1:14,0:9:4.40:4,0,16	0/0:9,0:7:6.02:0,6,75	0/0:17,0:10:20.85:0,21,178	0/0:22,0:17:0.72:0,1,1	0/1:19,0:12:0:0,0,0	0/1:18,6:22:0:0,0,0	0/1:16,6:17:0:0,0,0	./.	0/1:15,5:19:0.12:0,0,0	0/1:9,2:8:19.06:56,0,19	0/0:18,0:14:13.20:0,13,79	0/1:5,4:8:10.34:79,0,10
chr10	31098281	.	GTCTC	G	826.37	PASS	AB=0.892;AC=21;AF=0.438;AN=48;BaseQRankSum=4.286;DP=502;FS=0.000;HRun=0;HaplotypeScore=100.4591;InbreedingCoeff=0.3487;MQ=27.73;MQ0=60;MQRankSum=-1.990;QD=3.99;ReadPosRankSum=-0.049;VQSLOD=1.9022;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:22,4:20:1.55:4,2,0	1/1:8,5:14:11.39:135,11,0	./.	./.	0/0:36,8:39:0:0,0,0	0/0:19,9:22:0.93:0,1,2	0/1:7,2:7:0:0,0,0	0/1:14,3:12:2.20:243,0,2	0/0:20,0:19:30.08:0,30,646	0/0:20,0:16:22.58:0,23,194	0/0:20,0:12:1.25:0,1,3	1/1:13,8:19:10.89:92,11,0	1/1:13,3:13:9.25:95,9,0	0/0:11,5:10:2.92:0,3,17	0/0:20,0:20:20.97:0,21,389	1/1:11,5:14:2.26:51,2,0	1/1:12,2:9:8.02:81,8,0	1/1:7,1:6:3.48:53,3,0	0/1:14,0:6:14.09:14,0,34	1/1:20,0:16:2.84:29,3,0	0/0:19,0:11:0:0,0,0	0/0:23,6:26:0:0,0,0	0/0:18,7:20:0:0,0,0	./.	./.	0/1:11,4:12:26.89:159,0,27	0/0:18,0:14:7.97:0,8,44	0/1:11,0:10:2.05:2,0,40
chr10	31098285	.	C	CTG	325.75	PASS	AB=0.975;AC=21;AF=0.420;AN=50;BaseQRankSum=4.124;DP=530;FS=0.976;HRun=0;HaplotypeScore=116.2883;InbreedingCoeff=0.2064;MQ=27.83;MQ0=63;MQRankSum=-2.584;QD=0.94;ReadPosRankSum=1.771;VQSLOD=2.2875;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:27,1:21:0.46:0,0,1	1/1:14,1:15:1.46:70,1,0	./.	./.	0/1:45,2:42:0:0,0,0	1/1:25,2:22:0.90:3,1,0	1/1:10,0:8:0.47:1,0,0	0/1:17,1:13:98.98:99,0,129	0/0:21,0:20:35.98:0,36,487	0/0:24,0:20:41.12:0,41,347	0/0:20,0:12:2.86:0,3,24	0/1:24,1:21:0.82:64,0,1	0/1:16,1:13:17.42:66,0,17	0/0:17,0:11:2.92:0,3,17	0/0:19,0:19:33.04:0,33,395	0/1:18,0:15:4.08:9,0,4	1/1:15,0:9:4.54:26,5,0	0/1:8,0:6:4.42:4,0,14	0/0:16,0:7:12:0,12,128	0/0:21,0:16:0.72:0,1,1	0/1:20,0:12:0:0,0,0	1/1:31,0:28:2.80:13,3,0	0/1:26,0:20:0:0,0,0	./.	0/1:23,0:22:0.09:0,0,0	0/1:18,1:15:73.52:87,0,74	0/0:18,0:14:15.59:0,16,104	0/0:12,0:10:6.06:0,6,68
chr10	31098295	.	CTG	C	681.45	PASS	AB=1.000;AC=29;AF=0.580;AN=50;BaseQRankSum=1.735;DP=539;FS=4.061;HRun=0;HaplotypeScore=125.5702;InbreedingCoeff=0.2056;MQ=27.77;MQ0=66;MQRankSum=-0.956;QD=1.76;ReadPosRankSum=-0.804;VQSLOD=1.7464;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:19:2.08:0,2,11	0/1:17,0:17:1.77:15,0,2	./.	./.	0/1:48,0:43:0.17:0,0,0	0/0:24,1:20:1.88:0,2,4	1/1:14,0:11:1.19:5,1,0	0/0:16,0:10:9.81:0,10,40	0/0:18,0:17:26.98:0,27,508	1/1:20,3:20:27.01:306,27,0	1/1:16,3:11:5.97:46,6,0	1/1:25,0:21:3.01:11,3,0	0/1:19,0:15:4.07:44,0,4	1/1:18,1:13:2.84:14,3,0	0/0:18,0:18:17.95:0,18,279	1/1:18,0:15:5.11:18,5,0	0/1:15,0:9:3.08:48,0,3	1/1:8,0:6:2.07:22,2,0	0/1:15,0:7:17.72:28,0,18	1/1:18,1:16:2.92:17,3,0	1/1:20,2:13:2.87:21,3,0	0/0:30,0:26:0:0,0,0	0/1:28,0:23:0:0,0,0	./.	0/1:22,0:21:0:0,0,0	0/1:26,0:21:41.48:41,0,82	1/1:18,0:16:17.49:129,17,0	0/1:12,0:10:28.76:49,0,29
chr10	31098299	.	CTCTG	C	658.10	PASS	AB=0.997;AC=25;AF=0.500;AN=50;BaseQRankSum=1.065;DP=555;FS=4.090;HRun=0;HaplotypeScore=138.0801;InbreedingCoeff=0.0669;MQ=28.01;MQ0=66;MQRankSum=0.089;QD=1.73;ReadPosRankSum=-0.320;VQSLOD=2.6092;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,1:19:0.09:0,0,8	1/1:18,0:18:1.71:34,2,0	./.	./.	0/1:51,0:46:0.17:0,0,1	0/0:26,1:22:2.35:0,2,4	1/1:14,0:11:3.54:13,4,0	0/0:13,0:7:8.61:0,9,36	0/0:21,0:20:26.90:0,27,211	1/1:23,0:21:39.45:226,39,0	1/1:22,0:14:5.86:47,6,0	1/1:24,0:20:2.68:35,3,0	0/1:21,0:17:10.95:52,0,11	0/1:19,0:13:4.38:4,0,6	0/0:17,0:17:11.84:0,12,97	1/1:17,0:15:4.66:22,5,0	0/1:15,0:9:9.07:43,0,9	0/1:8,0:6:6.84:7,0,10	0/1:17,0:8:25.31:25,0,28	0/0:21,0:18:0:0,0,0	1/1:22,0:13:1.06:2,1,0	0/0:30,1:26:0:0,0,0	0/1:31,0:26:0:0,0,1	./.	0/1:24,0:23:0:0,0,0	0/1:25,1:21:64.74:92,0,65	0/1:17,0:16:10.63:131,0,11	0/1:12,0:10:26.83:51,0,27
chr10	31098301	.	CTG	C	968.87	PASS	AB=0.942;AC=27;AF=0.563;AN=48;BaseQRankSum=1.358;DP=560;FS=1.627;HRun=0;HaplotypeScore=135.2517;InbreedingCoeff=0.0750;MQ=28.03;MQ0=66;MQRankSum=-1.488;QD=2.43;ReadPosRankSum=0.406;VQSLOD=2.7782;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,2:19:2.08:0,2,11	1/1:14,4:18:0.83:29,1,0	./.	./.	0/1:48,2:45:0.21:0,0,1	0/0:28,1:24:1.88:0,2,4	1/1:11,3:11:5.40:77,5,0	0/0:15,0:8:13:0,13,50	0/0:15,6:20:26.79:0,27,211	1/1:23,0:21:42.50:289,42,0	1/1:22,0:14:5.97:46,6,0	1/1:19,5:20:6.38:73,6,0	0/1:17,4:17:20.55:81,0,21	0/1:19,0:13:4.33:4,0,7	0/1:17,0:17:9.06:9,0,82	1/1:14,3:15:9.45:108,9,0	0/1:14,1:9:9.06:45,0,9	0/1:7,1:6:6.81:7,0,10	0/1:16,0:8:25.40:25,0,32	./.	1/1:22,0:13:1.45:4,1,0	0/0:31,1:27:0:0,0,0	0/1:29,3:27:0:0,0,1	./.	0/1:22,2:23:0:0,0,0	0/1:24,3:22:58.64:171,0,59	1/1:16,1:16:5.80:81,6,0	0/1:12,0:10:10.70:50,0,11
chr10	31098371	.	CA	C	3197.56	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=11.601;DP=435;FS=31.096;HRun=1;HaplotypeScore=150.2784;InbreedingCoeff=0.9144;MQ=55.20;MQ0=9;MQRankSum=-11.569;QD=13.21;ReadPosRankSum=-1.971;VQSLOD=0.7298;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,14:17:34.93:292,35,0	1/1:3,13:16:32.74:234,33,0	0/0:30,1:15:37.62:0,38,394	0/0:31,2:15:14.21:0,14,259	1/1:5,18:22:26.79:231,27,0	1/1:2,11:13:20.86:163,21,0	1/1:1,7:8:17.91:135,18,0	1/1:2,10:10:29.82:282,30,0	0/0:18,0:18:44.54:0,45,474	0/0:17,0:17:44.97:0,45,518	0/0:13,0:13:32.68:0,33,391	1/1:4,15:18:32.65:255,33,0	1/1:3,8:11:23.78:178,24,0	1/1:2,11:13:23.82:170,24,0	0/0:24,0:23:34.23:0,34,618	1/1:1,10:11:23.91:220,24,0	1/1:5,10:15:17.87:141,18,0	1/1:2,2:4:2.91:21,3,0	0/0:12,0:11:29.99:0,30,332	0/0:7,0:7:17.85:0,18,204	0/0:19,0:18:37.91:0,38,452	1/1:5,9:14:20.92:174,21,0	1/1:3,19:20:35.80:294,36,0	1/1:2,6:8:2.96:20,3,0	1/1:0,22:22:44.81:351,45,0	1/1:2,11:13:32.75:234,33,0	0/0:19,0:19:46.22:0,46,548	1/1:0,1:1:2.98:21,3,0
chr10	31099136	.	C	CTTT	10885.28	PASS	AB=0.909;AC=47;AF=0.839;AN=56;BaseQRankSum=2.959;DP=667;FS=5.746;HRun=13;HaplotypeScore=143.2866;InbreedingCoeff=0.7787;MQ=66.10;MQ0=10;MQRankSum=-7.043;QD=19.44;ReadPosRankSum=-0.639;VQSLOD=2.6759;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:24,10:39:52.73:890,53,0	1/1:3,4:8:15:222,15,0	0/0:25,0:15:6.71:0,7,32	0/0:31,0:19:1.52:0,2,73	1/1:12,21:36:44.72:618,45,0	1/1:4,10:17:24.02:315,24,0	1/1:10,7:18:26.21:422,26,0	1/1:40,2:48:79.24:865,79,0	0/0:21,0:21:23.07:0,23,410	1/1:6,16:27:53.77:544,54,0	1/1:10,3:22:35.98:447,36,0	1/1:15,1:17:34.47:459,34,0	1/1:24,1:27:51.87:632,52,0	1/1:22,4:25:27.64:359,28,0	0/0:27,0:28:36.03:0,36,501	1/1:4,13:17:9.03:136,9,0	1/1:24,6:30:52.88:816,53,0	1/1:16,6:21:30.08:479,30,0	1/1:23,1:26:61.98:579,62,0	1/1:7,9:14:18.05:278,18,0	1/1:5,3:7:9.03:161,9,0	1/1:9,10:19:24.92:360,25,0	1/1:6,13:18:27.96:426,28,0	1/1:11,6:19:27.57:489,28,0	1/1:11,12:24:28.15:391,28,0	1/1:9,13:29:53.70:588,54,0	1/1:7,14:25:17.52:188,18,0	0/1:9,1:10:3.28:223,0,3
chr10	31099149	.	T	TTTTC	7368.79	PASS	AB=0.959;AC=40;AF=0.714;AN=56;BaseQRankSum=4.502;DP=628;FS=2.962;HRun=0;HaplotypeScore=133.9042;InbreedingCoeff=0.2103;MQ=56.67;MQ0=15;MQRankSum=-3.824;QD=13.75;ReadPosRankSum=6.928;VQSLOD=4.3147;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:41,1:40:8.65:690,0,9	1/1:7,0:7:5.60:186,6,0	0/0:16,0:8:4.45:0,4,60	0/0:25,0:15:11.03:0,11,146	1/1:29,1:31:10.81:526,11,0	1/1:15,0:15:14.15:262,14,0	0/1:16,3:17:13.16:323,0,13	1/1:41,0:42:10.33:778,10,0	0/0:19,0:18:44.20:0,44,659	0/1:24,0:23:58.76:80,0,59	1/1:22,0:22:3.79:136,4,0	1/1:14,2:16:19.34:233,19,0	1/1:24,2:27:26.80:447,27,0	1/1:24,2:25:21.70:232,22,0	0/0:30,0:30:75.05:0,75,930	0/1:13,0:13:0.42:125,0,0	1/1:29,5:34:39.77:685,40,0	1/1:22,1:19:1.73:337,2,0	0/1:26,0:23:36.66:93,0,37	0/1:14,0:13:36.32:54,0,36	0/1:10,0:9:31.70:32,0,62	1/1:18,0:16:20.57:308,21,0	1/1:18,0:16:17.39:357,17,0	1/1:22,1:22:4.81:344,5,0	1/1:18,2:21:16.13:340,16,0	1/1:27,1:28:21.71:409,22,0	1/1:21,0:22:2.75:95,3,0	0/1:8,1:10:4.13:298,0,4
chr10	31099433	.	C	CAACA	22526.98	PASS	AB=0.600;AC=46;AF=0.821;AN=56;BaseQRankSum=-9.749;DP=647;FS=3.202;HRun=0;HaplotypeScore=86.9360;InbreedingCoeff=0.7600;MQ=68.88;MQ0=0;MQRankSum=-5.182;QD=40.44;ReadPosRankSum=2.475;VQSLOD=5.2889;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:9,27:36:62.70:1453,63,0	0/1:3,6:9:31.08:348,0,31	0/0:24,0:23:24.55:0,25,357	0/0:27,0:27:42.13:0,42,638	1/1:6,15:22:42.14:1024,42,0	1/1:7,12:18:30.10:731,30,0	1/1:11,11:22:24.08:585,24,0	1/1:10,22:35:75.10:1456,75,0	0/0:16,0:16:39.12:0,39,608	1/1:9,1:22:30.75:533,31,0	1/1:4,1:18:20.99:352,21,0	1/1:5,10:16:27.09:658,27,0	1/1:11,10:22:27.09:642,27,0	1/1:4,18:22:42.14:1024,42,0	0/0:23,0:23:63.22:0,63,1029	1/1:5,26:32:69.24:1682,69,0	1/1:4,20:30:60.21:1457,60,0	1/1:7,18:25:36.12:878,36,0	1/1:3,7:11:26.90:352,27,0	0/1:7,13:21:10:838,0,10	1/1:7,23:33:57.20:1384,57,0	1/1:4,18:22:42.10:969,42,0	1/1:2,9:11:27.09:658,27,0	1/1:11,22:33:57.20:1390,57,0	1/1:6,17:26:36.12:856,36,0	1/1:6,20:28:63.12:1360,63,0	1/1:3,27:30:62.86:1530,63,0	1/1:3,6:9:15.05:366,15,0
chr10	31099634	.	TGG	T	10402.59	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=6.158;DP=587;FS=1.532;HRun=5;HaplotypeScore=168.4066;InbreedingCoeff=0.9850;MQ=62.85;MQ0=13;MQRankSum=-11.996;QD=33.13;ReadPosRankSum=-0.482;VQSLOD=3.0347;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,12:20:44:516,44,0	1/1:2,3:5:15.04:184,15,0	0/0:42,0:19:9.54:0,10,577	0/0:48,0:30:60.81:0,61,806	1/1:5,20:25:67.72:876,68,0	1/1:4,14:18:54.18:737,54,0	1/1:2,11:13:39.13:520,39,0	1/1:4,11:15:30.10:412,30,0	0/0:17,0:17:48.16:0,48,864	0/0:20,0:20:14.65:0,15,111	0/0:24,0:24:44.61:0,45,254	1/1:4,12:15:45.15:610,45,0	1/1:2,12:14:38.96:504,39,0	1/1:3,10:16:45.01:575,45,0	0/0:30,0:30:90.31:0,90,1617	1/1:0,26:25:51.17:687,51,0	1/1:12,13:24:63.14:820,63,0	1/1:7,11:17:45.13:589,45,0	0/0:0,0:22:39.52:0,40,136	0/0:1,0:22:30.92:0,31,108	0/0:2,0:15:19.98:0,20,67	1/1:5,14:19:54.14:691,54,0	1/1:1,9:10:30.10:401,30,0	1/1:6,12:16:42.14:571,42,0	1/1:0,19:20:39.02:499,39,0	1/1:2,25:27:72.23:957,72,0	0/0:5,0:31:53.83:0,54,184	1/1:0,8:8:18.06:252,18,0
chr10	31099638	.	G	GT	1001.78	PASS	AB=1.000;AC=6;AF=0.107;AN=56;BaseQRankSum=-2.235;DP=603;FS=1.533;HRun=0;HaplotypeScore=205.1509;InbreedingCoeff=0.5263;MQ=61.03;MQ0=13;MQRankSum=-0.978;QD=12.52;ReadPosRankSum=-0.664;VQSLOD=3.9762;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:9.87:0,10,168	0/0:5,0:5:5.62:0,6,26	0/0:45,0:19:29.41:0,29,469	0/0:50,0:32:51.49:0,51,657	0/0:26,0:25:16.86:0,17,160	0/0:18,0:18:34.41:0,34,168	0/0:14,0:14:1.67:0,2,65	0/0:17,0:17:23.62:0,24,131	0/0:17,0:17:51.16:0,51,688	1/1:6,13:19:39.40:483,39,0	1/1:1,21:23:57.89:626,58,0	0/0:16,0:15:9.99:0,10,105	0/0:16,0:16:17.22:0,17,91	0/0:18,0:18:41.09:0,41,172	0/0:31,0:31:93.30:0,93,1281	0/0:26,0:25:37.54:0,38,159	0/0:24,0:22:38.85:0,39,160	0/0:18,0:17:13.64:0,14,78	0/0:25,0:25:64.69:0,65,301	0/0:23,0:23:50.61:0,51,238	0/0:15,0:15:28.96:0,29,125	0/1:18,0:18:19.11:19,0,89	0/0:10,0:10:21.45:0,21,85	0/0:19,0:17:19.74:0,20,153	0/1:20,0:20:3.33:3,0,75	0/0:28,0:28:4.91:0,5,159	0/0:31,0:31:57.53:0,58,315	0/0:8,0:8:16.07:0,16,65
chr10	31099646	.	TG	T	3455.69	PASS	AB=0.979;AC=37;AF=0.661;AN=56;BaseQRankSum=13.916;DP=594;FS=2.406;HRun=1;HaplotypeScore=195.5193;InbreedingCoeff=0.9134;MQ=60.20;MQ0=17;MQRankSum=-12.279;QD=9.55;ReadPosRankSum=2.335;VQSLOD=1.7414;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:23,1:24:46.20:263,46,0	1/1:3,1:4:11.17:72,11,0	0/1:46,1:21:17.20:17,0,254	0/0:45,3:28:18.79:0,19,535	1/1:26,0:25:61.03:281,61,0	1/1:17,0:17:42.21:200,42,0	1/1:14,0:14:34.88:175,35,0	1/1:19,0:19:27.90:135,28,0	0/0:16,0:16:48.16:0,48,668	0/0:21,0:21:37.15:0,37,335	0/0:21,0:21:38.62:0,39,246	1/1:15,0:14:38.39:193,38,0	1/1:13,1:14:33.79:193,34,0	1/1:17,1:18:43.77:260,44,0	0/0:31,0:31:93.25:0,93,1222	1/1:23,2:24:44.98:220,45,0	1/1:23,0:21:49.52:240,50,0	1/1:15,0:14:33.38:143,33,0	0/0:27,0:26:74.75:0,75,558	0/0:25,0:25:68.60:0,69,427	0/0:12,0:12:32.23:0,32,209	1/1:16,2:18:45.63:244,46,0	1/1:11,0:11:26.60:115,27,0	1/1:18,0:16:37.05:176,37,0	1/1:18,0:18:37.89:198,38,0	1/1:27,1:28:24.94:252,25,0	0/0:30,0:30:83.23:0,83,442	1/1:8,0:8:18.10:79,18,0
chr10	31099675	.	G	GTT	8923.14	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=5.057;DP=607;FS=30.742;HRun=9;HaplotypeScore=176.0647;InbreedingCoeff=0.9918;MQ=61.73;MQ0=10;MQRankSum=-10.780;QD=25.79;ReadPosRankSum=-0.871;VQSLOD=1.8712;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,19:28:48.08:667,48,0	1/1:0,5:5:15.05:228,15,0	0/0:43,0:23:50.01:0,50,486	0/0:40,0:23:24.69:0,25,264	1/1:13,20:33:47.55:695,48,0	1/1:6,12:19:42.02:568,42,0	1/1:5,11:16:36.03:488,36,0	1/1:8,20:29:62.58:810,63,0	0/0:15,0:15:42.10:0,42,447	0/0:27,0:27:66.10:0,66,693	0/0:18,0:19:33.04:0,33,406	1/1:6,12:18:36.12:554,36,0	1/1:9,9:18:27.01:363,27,0	1/1:11,13:25:49.04:609,49,0	0/0:33,0:33:84.15:0,84,894	1/1:13,9:23:47.05:589,47,0	1/1:3,17:21:47.09:637,47,0	1/1:3,13:16:29.97:458,30,0	0/0:20,0:21:51.06:0,51,586	0/0:28,0:28:75.09:0,75,784	0/0:12,0:12:30.07:0,30,319	1/1:5,14:19:45.02:601,45,0	1/1:7,10:17:29.73:414,30,0	1/1:5,10:16:30.05:418,30,0	1/1:4,7:12:24.03:325,24,0	1/1:16,6:22:32.94:384,33,0	0/0:21,0:21:42:0,42,502	1/1:5,1:7:11.97:117,12,0
chr10	31100456	.	GATAAGAGTTCTGTGTTT	G	6963.63	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=11.258;DP=634;FS=5.208;HRun=0;HaplotypeScore=300.8486;InbreedingCoeff=0.9894;MQ=82.52;MQ0=0;MQRankSum=-11.031;QD=96.72;ReadPosRankSum=1.515;VQSLOD=4.1764;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:92.85:0,93,6766	0/0:11,0:11:33.11:0,33,2745	0/0:29,0:29:84.29:0,84,5272	0/0:18,0:17:20.54:0,21,2506	0/0:33,0:33:96.32:0,96,6839	0/0:19,0:19:57.20:0,57,4486	0/0:17,0:17:48.16:0,48,3192	0/0:41,0:41:99:0,117,8009	0/0:20,0:20:60.21:0,60,4783	0/0:30,0:30:90.31:0,90,6744	0/0:22,0:22:63.22:0,63,5110	0/0:16,0:16:42.14:0,42,3243	0/0:21,0:21:63.22:0,63,5014	0/0:23,0:23:66.23:0,66,5490	0/0:31,0:31:93.32:0,93,7406	0/0:22,0:22:57.20:0,57,4354	0/0:20,0:20:60.21:0,60,4646	0/0:19,0:18:48.16:0,48,3874	1/1:6,12:17:36.12:1675,36,0	1/1:6,22:28:51.18:2512,51,0	1/1:1,6:7:12.04:562,12,0	0/0:24,0:24:69.24:0,69,4902	0/0:24,0:24:69.24:0,69,5700	0/0:28,0:28:84.29:0,84,6525	0/0:23,0:23:63.21:0,63,4771	0/0:28,0:28:81.28:0,81,6749	1/1:1,18:19:45.15:2215,45,0	0/0:8,0:8:24.08:0,24,1672
chr10	31100929	.	G	GT	2073.21	PASS	AB=0.777;AC=13;AF=0.232;AN=56;BaseQRankSum=-4.087;DP=543;FS=5.711;HRun=10;HaplotypeScore=83.4150;InbreedingCoeff=0.7051;MQ=79.61;MQ0=0;MQRankSum=1.978;QD=11.58;ReadPosRankSum=-0.308;VQSLOD=3.1917;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:28:76.79:0,77,606	0/0:8,0:8:20.97:0,21,172	0/0:19,0:20:12.28:0,12,135	0/0:12,0:10:17.72:0,18,130	0/0:25,0:25:65.89:0,66,540	0/0:26,0:26:62.86:0,63,514	0/0:17,0:17:44.88:0,45,363	0/0:22,1:23:47.91:0,48,393	0/0:13,0:13:28.95:0,29,224	0/1:11,20:31:7.82:515,0,8	1/1:4,21:26:56.97:575,57,0	0/0:24,1:25:39.92:0,40,532	0/0:16,0:17:40.95:0,41,324	0/0:22,0:22:50.90:0,51,419	0/0:22,0:22:53.87:0,54,436	0/0:15,0:15:40.20:0,40,324	0/0:19,0:19:47.67:0,48,372	0/0:21,0:21:41.90:0,42,341	1/1:12,1:26:55.90:336,56,0	1/1:1,0:24:54.66:310,55,0	1/1:0,0:11:14.24:72,14,0	0/0:11,0:11:23.95:0,24,197	0/0:19,0:19:42.81:0,43,346	0/0:8,0:8:20.97:0,21,170	0/0:13,0:13:23.92:0,24,192	0/1:21,3:24:39.04:39,0,337	1/1:2,4:32:71.52:393,72,0	0/1:4,1:5:17:17,0,84
chr10	31102862	.	TTTCCTTCC	T	1628.94	PASS	AB=1.000;AC=29;AF=0.763;AN=38;BaseQRankSum=0.726;DP=549;FS=3.988;HRun=0;HaplotypeScore=152.1793;InbreedingCoeff=0.5195;MQ=58.44;MQ0=8;MQRankSum=-2.976;QD=5.52;ReadPosRankSum=-0.047;VQSLOD=2.1919;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:23:2.99:23,3,0	./.	./.	./.	0/0:14,0:19:14.97:0,15,121	0/0:24,0:28:11.99:0,12,123	./.	./.	1/1:11,0:17:15.05:276,15,0	./.	1/1:20,5:25:14.96:258,15,0	1/1:13,3:16:6.02:145,6,0	1/1:30,3:33:6.02:145,6,0	0/0:18,0:18:3.01:0,3,121	0/0:19,0:19:15.05:0,15,528	1/1:17,2:19:6.02:145,6,0	1/1:10,0:13:3.01:56,3,0	1/1:23,0:22:3:29,3,0	0/1:19,0:19:0:0,0,0	1/1:20,0:20:6.02:111,6,0	./.	1/1:17,2:18:6.02:145,6,0	1/1:9,1:10:3.01:73,3,0	./.	./.	1/1:20,5:25:15.01:220,15,0	1/1:18,0:18:3.01:56,3,0	1/1:14,1:14:3.01:73,3,0
chr10	31102919	.	TTCCTTCCTTCCTTCCA	T	1221.66	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=3.168;DP=388;FS=5.741;HRun=0;HaplotypeScore=151.6341;InbreedingCoeff=0.6820;MQ=55.28;MQ0=20;MQRankSum=-0.432;QD=13.28;ReadPosRankSum=-0.130;VQSLOD=2.1564;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:20:56.94:0,57,1039	0/0:5,0:5:11.53:0,12,77	0/1:11,0:4:1.67:2,0,43	0/1:16,0:6:0.48:0,0,27	0/0:17,0:16:48.08:0,48,1133	0/0:18,0:17:47.87:0,48,1084	0/0:23,0:20:47.90:0,48,548	0/0:21,0:16:47.96:0,48,425	0/1:10,0:10:64.40:64,0,153	0/0:15,0:14:42.03:0,42,584	0/0:12,0:12:36.08:0,36,626	0/0:13,0:13:32.98:0,33,403	0/0:13,0:13:33:0,33,504	0/0:8,0:8:20.96:0,21,495	0/0:16,0:15:44.98:0,45,1347	0/0:14,0:14:42.01:0,42,647	0/0:20,0:20:34.55:0,35,519	0/0:15,0:14:41.51:0,42,485	1/1:10,0:10:29.98:326,30,0	1/1:0,12:12:32.66:475,33,0	1/1:17,0:17:50.25:365,50,0	0/0:8,0:8:24.01:0,24,319	0/0:5,0:5:14.99:0,15,185	0/0:20,0:19:54.30:0,54,817	0/0:6,0:5:15.01:0,15,207	0/0:14,0:13:39.05:0,39,711	1/1:0,16:16:3.01:144,3,0	0/0:12,0:11:33.04:0,33,555
chr10	31103118	.	TTTTTGGG	T	1527.92	PASS	AB=1.000;AC=8;AF=0.143;AN=56;BaseQRankSum=0.018;DP=513;FS=8.128;HRun=0;HaplotypeScore=158.4195;InbreedingCoeff=0.3937;MQ=59.05;MQ0=29;MQRankSum=-3.249;QD=17.17;ReadPosRankSum=-0.756;VQSLOD=2.2442;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:30:47.96:0,48,923	0/0:7,0:7:14.98:0,15,161	0/0:43,0:14:41.80:0,42,740	0/0:38,0:18:41.69:0,42,609	0/1:23,0:19:12.57:13,0,353	0/0:12,0:12:32.17:0,32,331	0/0:21,0:20:29.69:0,30,567	0/0:23,0:17:24.12:0,24,646	0/0:6,0:5:12.04:0,12,381	1/1:3,15:18:42.14:904,42,0	1/1:1,12:12:30.06:709,30,0	0/1:11,0:11:18.18:18,0,215	0/0:20,0:20:11.50:0,11,686	0/0:9,0:8:19.43:0,19,282	0/0:8,0:8:21.01:0,21,606	0/0:13,0:12:12.79:0,13,414	0/0:22,0:18:23.10:0,23,643	0/0:15,0:15:30.04:0,30,524	0/0:14,0:14:41.86:0,42,524	0/1:15,0:14:23.48:23,0,420	0/0:5,0:4:3.81:0,4,19	0/0:15,0:14:15.95:0,16,453	0/0:25,0:24:42.82:0,43,675	0/0:23,0:18:7.22:0,7,312	0/0:21,0:19:52.92:0,53,686	0/0:22,0:22:15.20:0,15,777	0/0:31,0:30:84.02:0,84,1253	0/1:9,0:7:2.07:2,0,104
chr10	31103122	.	TGGGGG	T	7980.68	PASS	AB=0.556;AC=47;AF=0.839;AN=56;BaseQRankSum=-1.817;DP=348;FS=27.811;HRun=7;HaplotypeScore=88.3438;InbreedingCoeff=0.7554;MQ=62.63;MQ0=31;MQRankSum=-5.574;QD=30.58;ReadPosRankSum=3.442;VQSLOD=1.0433;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,12:17:39.13:738,39,0	1/1:0,2:6:12.04:183,12,0	0/0:40,0:12:29.55:0,30,349	0/0:34,0:15:25.34:0,25,435	1/1:4,10:14:30.06:515,30,0	1/1:2,7:10:30.08:530,30,0	1/1:1,9:13:33.11:620,33,0	1/1:4,2:2:6.02:122,6,0	0/0:7,0:6:15.05:0,15,396	1/1:18,0:18:26.16:95,26,0	1/1:13,0:12:24.54:87,25,0	1/1:0,8:8:21.07:425,21,0	1/1:1,8:9:24.08:485,24,0	1/1:1,3:4:9.03:155,9,0	0/0:6,0:6:15.05:0,15,424	1/1:4,4:8:18.06:319,18,0	1/1:4,6:8:21.07:385,21,0	1/1:5,3:8:11.99:171,12,0	1/1:2,0:9:22.58:143,23,0	1/1:6,0:11:11.95:178,12,0	1/1:1,0:1:2.97:20,3,0	1/1:2,3:8:18.06:323,18,0	1/1:6,7:16:34:615,34,0	1/1:1,10:14:27:456,27,0	1/1:2,7:11:24.08:478,24,0	0/1:2,7:10:60.07:452,0,60	1/1:5,0:13:28.76:205,29,0	1/1:3,5:6:15.05:280,15,0
chr10	31103978	.	ATTCT	A	17138.50	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=15.382;DP=621;FS=5.641;HRun=0;HaplotypeScore=110.3256;InbreedingCoeff=0.9977;MQ=85.73;MQ0=1;MQRankSum=-11.816;QD=45.10;ReadPosRankSum=4.189;VQSLOD=5.4793;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,27:29:69.10:1229,69,0	1/1:1,13:14:30.10:559,30,0	0/0:27,0:26:75.25:0,75,1892	0/0:21,0:22:56.40:0,56,1531	1/1:2,22:24:50.64:809,51,0	1/1:0,29:29:75.26:1422,75,0	1/1:0,22:22:54.19:1046,54,0	1/1:1,31:32:90.23:1614,90,0	0/0:20,0:20:57.20:0,57,1529	0/0:32,0:32:93.28:0,93,2430	0/0:14,0:14:42.13:0,42,1080	1/1:1,25:26:59.78:1141,60,0	1/1:1,25:26:63.22:1214,63,0	1/1:0,18:18:44.36:820,44,0	0/0:30,0:30:90.31:0,90,2437	1/1:1,29:30:63.22:1215,63,0	1/1:0,23:23:53.84:1018,54,0	1/1:1,13:14:36.12:698,36,0	0/0:29,0:29:81.23:0,81,1907	0/0:19,0:19:57.20:0,57,1540	0/0:22,0:22:66.21:0,66,1733	1/1:0,16:16:45.06:741,45,0	1/1:1,8:9:18.95:339,19,0	1/1:2,24:26:58.14:1063,58,0	1/1:0,14:14:36.12:654,36,0	1/1:0,21:21:63.22:1207,63,0	0/0:26,0:26:75.21:0,75,1903	1/1:0,6:6:18.06:349,18,0
chr10	31104573	.	ATGTGTG	A	14051.11	PASS	AB=0.568;AC=33;AF=0.589;AN=56;BaseQRankSum=13.119;DP=714;FS=2.429;HRun=0;HaplotypeScore=165.9335;InbreedingCoeff=0.7640;MQ=55.36;MQ0=2;MQRankSum=-15.313;QD=32.91;ReadPosRankSum=3.436;VQSLOD=4.8999;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,14:19:24.06:472,24,0	1/1:2,9:11:21.07:457,21,0	0/0:44,0:36:69.20:0,69,2029	0/0:25,0:20:31.62:0,32,837	1/1:5,35:40:72.24:1448,72,0	1/1:8,23:31:36.12:783,36,0	0/1:4,14:18:52.59:651,0,53	1/1:8,12:21:39.08:669,39,0	0/0:22,0:22:54.16:0,54,1685	0/0:28,0:29:84.29:0,84,2639	0/0:26,0:27:60.21:0,60,1818	1/1:5,24:29:36.12:783,36,0	1/1:6,21:27:39.13:849,39,0	1/1:7,25:32:51.18:1108,51,0	0/0:27,0:27:74.47:0,74,2221	1/1:6,21:27:51.18:1112,51,0	1/1:7,10:17:15.87:281,16,0	0/1:5,10:15:70.41:70,0,85	0/0:18,0:19:42.10:0,42,1060	0/0:40,0:41:99:0,114,3497	0/0:24,0:26:57.16:0,57,1666	1/1:5,23:29:48.16:1044,48,0	1/1:3,24:27:51.18:1101,51,0	1/1:8,8:16:6.02:122,6,0	1/1:2,19:21:42.14:907,42,0	0/1:5,28:33:14.28:1670,0,14	0/0:26,0:25:69.24:0,69,2261	1/1:3,11:14:24.08:523,24,0
chr10	31107150	.	G	GA	4529	PASS	AB=0.701;AC=42;AF=0.750;AN=56;BaseQRankSum=-5.314;DP=459;FS=9.030;HRun=13;HaplotypeScore=59.0290;InbreedingCoeff=0.1104;MQ=54.91;MQ0=16;MQRankSum=0.354;QD=10.48;ReadPosRankSum=-0.635;VQSLOD=3.4035;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:7,13:21:3.32:144,0,3	1/1:2,4:6:12.48:112,12,0	0/1:11,0:2:3.45:5,0,3	0/1:23,0:6:1.56:2,0,25	1/1:3,16:20:42.36:364,42,0	0/1:3,8:11:2.56:121,0,3	0/1:3,9:12:8.12:218,0,8	1/1:17,6:24:9.47:187,9,0	0/0:9,0:9:19.86:0,20,129	0/1:10,12:23:29.67:197,0,30	0/1:5,4:10:2.80:97,0,3	1/1:4,10:14:18.02:167,18,0	1/1:7,10:20:15.44:223,15,0	1/1:2,9:11:8.96:75,9,0	0/0:13,2:17:8.91:0,9,188	0/1:4,11:15:49.20:162,0,49	1/1:12,15:27:15.32:267,15,0	1/1:14,25:40:3.92:463,4,0	1/1:5,9:15:8.49:229,8,0	1/1:5,9:13:23.95:207,24,0	1/1:4,2:4:3:28,3,0	1/1:1,6:7:18.02:167,18,0	0/1:6,4:10:31.66:58,0,32	1/1:2,11:13:27.03:251,27,0	1/1:10,13:24:2.24:219,2,0	1/1:9,11:17:15.21:253,15,0	1/1:9,7:15:12.59:241,13,0	0/1:5,7:11:8.57:72,0,9
chr10	31108350	.	T	TTG	25946.53	PASS	AB=1.000;AC=49;AF=0.875;AN=56;BaseQRankSum=3.521;DP=871;FS=4.599;HRun=0;HaplotypeScore=128.4119;InbreedingCoeff=0.7942;MQ=67.58;MQ0=11;MQRankSum=-4.466;QD=33.78;ReadPosRankSum=3.225;VQSLOD=6.8334;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,40:45:27.30:1509,27,0	1/1:2,8:10:24.08:397,24,0	0/1:45,0:40:9:9,0,584	0/0:27,0:22:20:0,20,433	1/1:11,26:36:40.74:1181,41,0	1/1:5,28:34:78.27:1288,78,0	1/1:6,16:22:16.66:801,17,0	1/1:10,20:30:60.16:899,60,0	0/0:34,0:34:78.21:0,78,974	1/1:7,18:25:29.82:864,30,0	1/1:2,21:25:66.22:1061,66,0	1/1:6,27:33:46.75:1298,47,0	1/1:4,23:27:31.71:1052,32,0	1/1:5,22:28:60.20:977,60,0	0/0:42,0:42:99:0,117,1452	1/1:7,31:38:78.27:1284,78,0	1/1:4,30:34:3.21:1113,3,0	1/1:2,34:36:89.98:1485,90,0	1/1:10,14:25:10.69:628,11,0	1/1:4,23:27:69.24:1133,69,0	1/1:15,27:43:87.30:1416,87,0	1/1:2,21:23:60.21:990,60,0	1/1:2,21:23:63.22:1040,63,0	1/1:11,36:47:96.33:1584,96,0	1/1:6,25:31:72.25:1189,72,0	1/1:1,31:32:90.23:1391,90,0	1/1:4,26:28:66.17:1059,66,0	1/1:4,10:11:18.06:297,18,0
chr10	31108642	.	C	CTCCT	3144.61	PASS	AB=0.803;AC=14;AF=0.269;AN=52;BaseQRankSum=-2.737;DP=645;FS=5.772;HRun=0;HaplotypeScore=110.1777;InbreedingCoeff=0.7626;MQ=58.40;MQ0=10;MQRankSum=0.974;QD=15.41;ReadPosRankSum=-0.899;VQSLOD=2.8394;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:25:41.88:0,42,607	0/0:11,0:11:15.05:0,15,232	./.	./.	0/0:30,0:30:51.13:0,51,729	0/0:32,0:31:66.10:0,66,957	0/0:28,0:30:33.09:0,33,465	0/0:36,0:36:21.07:0,21,316	1/1:16,12:28:11.86:546,12,0	1/1:26,0:29:44.29:521,44,0	1/1:15,0:18:15.45:202,15,0	0/0:19,0:19:33.11:0,33,514	0/0:19,0:20:33.54:0,34,468	0/0:10,0:10:21.02:0,21,302	0/1:17,0:18:21.37:21,0,350	0/0:20,0:20:39.12:0,39,578	0/0:21,0:22:26.60:0,27,378	0/0:10,0:10:18.06:0,18,283	1/1:10,12:21:35.93:703,36,0	1/1:19,19:40:6.68:709,7,0	0/1:13,14:27:27.73:338,0,28	0/0:21,0:21:24.07:0,24,358	0/0:23,0:23:37.30:0,37,713	0/0:21,0:21:38.68:0,39,496	0/0:19,0:19:30.09:0,30,442	0/0:27,0:27:39.10:0,39,519	1/1:13,7:20:12.04:285,12,0	0/0:19,0:19:18.06:0,18,283
chr10	31108760	.	CCTTTCCTCTCTT	C	4842.01	PASS	AB=0.960;AC=5;AF=0.089;AN=56;BaseQRankSum=8.106;DP=726;FS=5.725;HRun=0;HaplotypeScore=267.4208;InbreedingCoeff=0.7403;MQ=67.15;MQ0=4;MQRankSum=-8.606;QD=62.08;ReadPosRankSum=0.560;VQSLOD=3.6467;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:75.04:0,75,2890	0/0:6,0:5:15.05:0,15,826	0/0:40,0:32:74.68:0,75,2572	0/0:44,0:33:6:0,6,1789	0/0:32,0:32:90.21:0,90,3994	0/0:21,0:20:57.11:0,57,2721	0/0:22,0:22:57.18:0,57,2617	0/0:27,0:27:66.19:0,66,2536	0/0:26,0:26:75.24:0,75,3713	1/1:10,21:31:90.12:2754,90,0	1/1:4,19:23:66.17:2035,66,0	0/0:23,0:23:57.20:0,57,2990	0/0:21,0:21:54.17:0,54,2733	0/0:22,0:22:51.16:0,51,2577	0/0:30,0:30:81.26:0,81,4262	0/0:25,0:25:75.20:0,75,3654	0/0:28,0:29:58.47:0,58,2946	0/0:19,0:18:45.10:0,45,2009	0/0:17,0:17:48.13:0,48,2168	0/0:22,0:22:63.20:0,63,3383	0/0:20,0:20:48.16:0,48,2853	0/0:34,0:34:93.24:0,93,4132	0/0:28,0:27:75.14:0,75,3077	0/0:40,0:40:99:0,105,5088	0/0:25,0:25:60.21:0,60,2784	0/1:23,1:24:53.60:54,0,2711	0/0:32,0:32:90.25:0,90,4485	0/0:11,0:11:33.07:0,33,1418
chr10	31108803	.	TTTCCTTCC	T	13632.96	PASS	AB=0.670;AC=31;AF=0.574;AN=54;BaseQRankSum=5.296;DP=777;FS=0.000;HRun=0;HaplotypeScore=224.9454;InbreedingCoeff=0.7320;MQ=57.54;MQ0=10;MQRankSum=-9.854;QD=30.36;ReadPosRankSum=-2.387;VQSLOD=4.0115;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:15,14:29:29.97:578,30,0	1/1:3,4:6:12.04:305,12,0	0/0:51,0:22:9.03:0,9,332	0/0:46,0:20:6.02:0,6,193	1/1:7,21:29:53.88:1150,54,0	1/1:5,15:20:39.13:991,39,0	0/1:15,14:29:11.80:797,0,12	1/1:20,9:30:27.09:602,27,0	0/0:32,0:32:60.21:0,60,2446	0/0:18,0:39:77.95:0,78,781	0/0:7,0:28:65.94:0,66,576	1/1:12,16:28:36.12:915,36,0	1/1:10,14:24:27.09:686,27,0	1/1:9,17:26:36.12:915,36,0	0/0:29,0:29:63.20:0,63,2249	1/1:12,14:26:39.13:991,39,0	0/1:19,12:31:99:501,0,180	1/1:14,6:18:6.02:152,6,0	0/0:19,0:19:18.05:0,18,583	0/0:32,0:32:84.29:0,84,3080	0/0:20,0:20:42.14:0,42,1506	1/1:12,13:25:36.08:822,36,0	0/1:12,20:31:26.60:985,0,27	1/1:19,19:38:21.54:535,22,0	1/1:5,19:24:42.14:1067,42,0	1/1:7,23:30:69.24:1641,69,0	0/0:25,0:25:45.15:0,45,1783	./.
chr10	31109761	.	G	GAA	7830.97	PASS	AB=0.726;AC=41;AF=0.732;AN=56;BaseQRankSum=-6.873;DP=717;FS=3.788;HRun=12;HaplotypeScore=96.5011;InbreedingCoeff=0.7254;MQ=73.52;MQ0=0;MQRankSum=-0.846;QD=14.26;ReadPosRankSum=-4.152;VQSLOD=3.0866;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,26:34:37.73:443,38,0	1/1:0,6:7:12.04:162,12,0	0/0:24,0:23:12.48:0,12,145	0/0:14,0:15:27.52:0,28,194	1/1:5,22:29:56.83:601,57,0	1/1:5,13:18:16.26:214,16,0	1/1:5,17:23:18.06:252,18,0	1/1:19,5:27:22.96:409,23,0	0/0:23,0:25:44.17:0,44,418	0/0:8,0:30:32.11:0,32,168	0/0:7,0:30:42.38:0,42,211	1/1:4,27:32:35.50:471,35,0	1/1:8,20:29:16.50:511,16,0	1/1:3,17:22:19.93:228,20,0	0/0:37,0:41:84.01:0,84,723	1/1:5,28:34:45.14:617,45,0	1/1:5,17:23:15.93:199,16,0	1/1:2,12:15:21.05:251,21,0	1/1:10,1:24:29.11:302,29,0	1/1:5,1:26:48.52:404,49,0	1/1:3,1:19:5.50:37,6,0	1/1:6,21:28:53.81:582,54,0	1/1:14,8:22:55.39:636,55,0	0/1:9,19:28:22.59:346,0,23	0/1:7,16:25:6.53:184,0,7	1/1:8,21:31:22.64:618,23,0	1/1:12,1:41:23.33:208,23,0	0/1:9,0:9:4.42:156,0,4
chr10	31110634	.	GGTTTTGTGTGTGTGTGTGT	G	4969.60	PASS	AB=0.547;AC=32;AF=0.667;AN=48;BaseQRankSum=6.781;DP=513;FS=47.189;HRun=0;HaplotypeScore=145.0379;InbreedingCoeff=0.6249;MQ=62.00;MQ0=67;MQRankSum=-3.539;QD=15.58;ReadPosRankSum=1.354;VQSLOD=2.3075;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:25,0:15:45.15:0,45,971	0/0:22,0:18:45.13:0,45,788	./.	1/1:6,0:16:6.02:164,6,0	1/1:10,17:19:3.01:104,3,0	1/1:22,0:21:45.14:756,45,0	0/0:18,0:18:48.16:0,48,1770	0/0:13,0:13:33.10:0,33,191	0/0:2,0:2:2.88:0,3,21	1/1:9,0:23:3.01:59,3,0	1/1:6,0:17:8.40:265,8,0	1/1:6,0:30:9.03:258,9,0	0/0:30,0:29:87.25:0,87,3452	1/1:6,13:17:8.78:444,9,0	1/1:5,21:23:15.05:813,15,0	1/1:6,10:13:6.02:201,6,0	1/1:14,0:14:24.08:431,24,0	1/1:0,6:6:3.01:105,3,0	./.	1/1:7,0:4:3.01:52,3,0	0/0:9,0:7:0.47:0,0,1	0/1:6,0:24:0:0,0,0	1/1:3,2:4:3.01:105,3,0	0/1:2,0:14:1.45:320,0,1	1/1:2,1:16:16.69:693,17,0	1/1:16,0:6:15:199,15,0
chr10	31110638	.	TTGTG	T	526.11	PASS	AB=0.978;AC=21;AF=0.808;AN=26;BaseQRankSum=3.593;DP=478;FS=0.000;HRun=0;HaplotypeScore=87.4780;InbreedingCoeff=0.1462;MQ=57.37;MQ0=73;MQRankSum=-3.491;QD=2.06;ReadPosRankSum=-0.229;VQSLOD=1.0524;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	./.	1/1:18,0:14:3:28,3,0	./.	./.	1/1:16,3:20:6.02:92,6,0	0/0:14,0:14:0:0,0,0	./.	0/1:26,0:20:0:0,0,0	1/1:19,0:15:5.73:55,6,0	1/1:28,0:26:5.97:48,6,0	0/1:27,1:28:22.92:23,0,159	1/1:17,0:15:5.89:52,6,0	1/1:27,0:22:15.02:139,15,0	1/1:16,0:13:2.98:28,3,0	./.	./.	./.	./.	./.	0/1:28,0:23:0:0,0,0	./.	1/1:14,0:13:3:28,3,0	1/1:14,0:13:12.58:113,13,0	./.
chr10	31110688	.	GTA	G	233.47	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=2.221;DP=573;FS=0.856;HRun=0;HaplotypeScore=112.4412;InbreedingCoeff=0.7712;MQ=63.19;MQ0=22;MQRankSum=-0.737;QD=7.30;ReadPosRankSum=-0.315;VQSLOD=3.0930;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:33:62.57:0,63,469	0/0:9,0:6:11.98:0,12,99	0/0:30,0:17:44.35:0,44,410	0/0:26,0:17:22.33:0,22,348	0/0:16,0:14:14.92:0,15,120	0/0:21,0:19:31.17:0,31,243	0/0:30,0:30:62.56:0,63,476	0/0:27,0:27:68.76:0,69,562	0/0:15,0:15:32.06:0,32,237	1/1:15,0:14:41.68:324,42,0	1/1:1,16:17:2.55:16,3,0	0/0:19,0:18:20.90:0,21,166	0/0:21,0:21:38.41:0,38,318	0/0:25,0:25:31.09:0,31,243	0/0:26,0:26:53.06:0,53,526	0/0:22,0:21:33.55:0,34,229	0/0:26,0:24:25.96:0,26,147	0/0:14,0:12:23.37:0,23,165	0/0:15,0:15:44.81:0,45,368	0/0:8,0:8:11.86:0,12,88	0/0:49,0:47:49.82:0,50,389	0/0:9,0:8:8.95:0,9,74	0/0:7,0:7:8.96:0,9,69	0/0:35,0:35:35.79:0,36,272	0/0:8,0:8:11.98:0,12,99	0/0:24,0:23:58.42:0,58,497	0/0:19,0:18:22.86:0,23,180	0/0:6,0:4:11.97:0,12,95
chr10	31111784	.	G	GT	394.05	PASS	AB=0.907;AC=11;AF=0.196;AN=56;BaseQRankSum=0.659;DP=591;FS=0.581;HRun=14;HaplotypeScore=106.1388;InbreedingCoeff=0.0242;MQ=74.97;MQ0=1;MQRankSum=1.628;QD=1.64;ReadPosRankSum=-2.022;VQSLOD=-0.2055;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:20,2:24:10.39:10,0,178	0/0:11,0:11:29.53:0,30,191	0/1:32,1:25:6.62:7,0,89	0/0:20,0:12:1.71:0,2,24	0/0:17,1:18:3.16:0,3,147	0/0:28,0:29:72.93:0,73,466	0/1:6,1:9:31.72:32,0,47	0/0:36,1:40:8.09:0,8,265	0/0:16,0:18:39.51:0,40,242	1/1:6,13:19:13.70:237,14,0	0/1:10,9:21:0.08:158,0,0	0/0:14,0:15:19.55:0,20,121	0/0:19,0:19:34.60:0,35,218	0/0:12,0:12:20.24:0,20,132	0/0:16,0:19:35.88:0,36,198	0/0:13,0:15:7.42:0,7,94	0/1:20,1:23:5.77:6,0,178	0/0:8,0:8:3.72:0,4,66	0/1:18,1:22:18.48:18,0,117	0/1:27,2:32:38.94:39,0,179	0/0:12,0:13:22.59:0,23,138	0/0:17,0:18:37.45:0,37,235	0/0:22,0:22:41.20:0,41,269	0/0:15,0:16:28.41:0,28,177	0/0:23,1:26:26.09:0,26,272	0/1:32,4:36:13.11:13,0,266	0/0:31,0:31:25.68:0,26,267	0/1:15,2:20:17.29:17,0,226
chr10	31114534	.	A	AT	1025.44	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-4.946;DP=731;FS=4.901;HRun=9;HaplotypeScore=69.3499;InbreedingCoeff=0.9926;MQ=60.65;MQ0=0;MQRankSum=0.792;QD=25.01;ReadPosRankSum=0.141;VQSLOD=4.4234;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,123,1058	0/0:10,0:10:29.99:0,30,260	0/0:19,0:19:38.98:0,39,338	0/0:10,0:9:17.94:0,18,151	0/0:32,0:32:83.96:0,84,725	0/0:31,0:31:74.95:0,75,647	0/0:12,0:12:26.97:0,27,234	0/0:25,0:26:58.98:0,59,495	0/0:24,0:24:62.97:0,63,543	1/1:4,23:27:72.17:775,72,0	1/1:1,12:14:36.02:372,36,0	0/0:25,0:25:65.96:0,66,569	0/0:34,0:34:92.97:0,93,807	0/0:27,0:27:70.80:0,71,604	0/0:27,0:28:68.01:0,68,576	0/0:33,0:33:95.89:0,96,819	0/0:28,0:28:77.92:0,78,664	0/0:37,0:37:89.97:0,90,781	0/0:19,1:20:20.79:0,21,406	0/0:22,0:22:62.97:0,63,542	0/0:29,0:29:77.95:0,78,672	0/0:29,0:30:80:0,80,683	0/0:19,0:19:47.99:0,48,417	0/0:21,0:21:53.97:0,54,469	0/0:28,0:28:77.96:0,78,672	0/0:35,1:36:62.78:0,63,774	0/0:44,0:44:94.68:0,95,983	0/0:20,0:20:59.99:0,60,521
chr10	31114827	.	CACTT	C	1601.19	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.856;DP=684;FS=3.321;HRun=0;HaplotypeScore=109.3583;InbreedingCoeff=0.9920;MQ=85.77;MQ0=0;MQRankSum=-2.728;QD=48.52;ReadPosRankSum=1.712;VQSLOD=4.3317;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,135,3709	0/0:13,0:13:39.13:0,39,1057	0/0:29,0:29:87.29:0,87,2205	0/0:22,0:22:59.84:0,60,1524	0/0:25,0:25:75.26:0,75,2064	0/0:31,0:31:90.29:0,90,2449	0/0:18,0:18:54.17:0,54,1386	0/0:21,0:21:57.19:0,57,1476	0/0:20,0:20:60.16:0,60,1580	1/1:0,19:19:57.20:1128,57,0	1/1:0,14:14:33.07:595,33,0	0/0:31,0:31:93.28:0,93,2414	0/0:30,0:30:90.29:0,90,2348	0/0:27,0:27:78.25:0,78,2051	0/0:26,0:26:78.27:0,78,2092	0/0:28,0:28:81.28:0,81,2220	0/0:35,0:35:99:0,105,2913	0/0:16,0:16:48.13:0,48,1279	0/0:23,0:23:66.17:0,66,1740	0/0:18,0:18:54.19:0,54,1446	0/0:29,0:29:87.26:0,87,2218	0/0:21,0:21:63.20:0,63,1655	0/0:24,0:24:72.25:0,72,1957	0/0:22,0:22:66.23:0,66,1843	0/0:30,0:30:90.31:0,90,2377	0/0:25,1:26:15.33:0,15,1916	0/0:30,0:30:87.26:0,87,2209	0/0:10,0:10:30.10:0,30,839
chr10	31115142	.	CT	C	5664.44	PASS	AB=0.706;AC=43;AF=0.768;AN=56;BaseQRankSum=-3.175;DP=534;FS=8.849;HRun=13;HaplotypeScore=66.9636;InbreedingCoeff=0.6531;MQ=73.66;MQ0=0;MQRankSum=3.150;QD=12.62;ReadPosRankSum=1.794;VQSLOD=4.6803;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,20:27:55.71:400,56,0	1/1:2,9:13:4.73:179,5,0	0/1:17,1:20:10.33:10,0,113	0/0:11,0:11:5.39:0,5,66	1/1:6,23:29:65.52:481,66,0	1/1:4,15:19:38.75:285,39,0	1/1:3,13:17:18.34:227,18,0	0/1:12,14:28:36.31:244,0,36	0/0:15,0:15:39.04:0,39,369	0/0:12,0:27:46:0,46,253	0/0:5,0:13:20.12:0,20,109	1/1:6,7:13:20.10:151,20,0	1/1:6,13:19:17.73:131,18,0	1/1:5,16:21:35.74:263,36,0	0/0:18,0:19:17.74:0,18,258	1/1:3,10:13:29.81:219,30,0	0/1:5,11:20:5.76:217,0,6	1/1:4,7:12:22.11:157,22,0	1/1:4,10:16:33.84:231,34,0	1/1:6,21:27:24.41:343,24,0	1/1:3,9:13:19.87:137,20,0	1/1:6,18:25:52.68:378,53,0	1/1:5,14:19:35.73:262,36,0	1/1:3,8:11:20.87:153,21,0	1/1:3,19:22:47.70:350,48,0	1/1:8,20:29:29.47:366,29,0	1/1:4,14:19:5.66:196,6,0	1/1:2,15:17:38.77:285,39,0
chr10	31115516	.	A	ATGT	20879.37	PASS	AC=48;AF=0.889;AN=54;BaseQRankSum=-1.198;DP=443;FS=5.481;HRun=0;HaplotypeScore=97.3467;InbreedingCoeff=0.9283;MQ=50.21;MQ0=0;MQRankSum=-3.533;QD=52.20;ReadPosRankSum=1.363;VQSLOD=7.1022;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,7:7:18.06:387,18,0	1/1:0,13:13:39.13:822,39,0	0/0:10,0:9:20.93:0,21,253	./.	1/1:0,26:27:62.96:1176,63,0	1/1:2,12:16:39.13:833,39,0	1/1:2,7:9:24.08:502,24,0	1/1:1,16:17:51.18:1110,51,0	0/0:15,0:15:45.15:0,45,644	1/1:2,20:23:69.23:1453,69,0	1/1:0,23:24:60.16:1237,60,0	1/1:1,12:13:36.12:761,36,0	1/1:0,13:13:36.12:768,36,0	1/1:1,16:17:51.18:1091,51,0	0/0:18,0:18:48.16:0,48,666	1/1:0,16:16:45.15:947,45,0	1/1:3,5:10:14.79:321,15,0	1/1:0,5:5:12.04:259,12,0	1/1:0,3:3:9.03:197,9,0	1/1:3,28:30:87.30:1871,87,0	1/1:2,5:7:15.05:299,15,0	1/1:2,26:28:81.28:1723,81,0	1/1:7,19:26:54.19:1133,54,0	1/1:1,5:6:8.99:118,9,0	1/1:1,25:26:72.25:1547,72,0	1/1:4,20:25:75.26:1611,75,0	1/1:24,4:28:18.02:325,18,0	1/1:0,6:10:18.06:388,18,0
chr10	31118806	.	T	TTA	4057.52	PASS	AB=0.625;AC=37;AF=0.804;AN=46;BaseQRankSum=-4.930;DP=202;FS=1.158;HRun=0;HaplotypeScore=27.4970;InbreedingCoeff=0.4517;MQ=87.02;MQ0=4;MQRankSum=-0.410;QD=30.06;ReadPosRankSum=1.691;VQSLOD=4.5964;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,1:2:3.01:49,3,0	1/1:1,1:2:3.01:49,3,0	0/0:14,0:8:1.01:0,1,24	0/0:30,0:14:11.29:0,11,62	1/1:2,4:6:12.04:197,12,0	1/1:3,2:5:6.02:98,6,0	1/1:2,1:3:3.01:49,3,0	1/1:7,25:32:75.20:1112,75,0	0/0:7,0:7:9.03:0,9,112	1/1:3,2:5:9.02:126,9,0	1/1:2,0:2:3.01:47,3,0	1/1:1,3:4:9.03:148,9,0	1/1:3,2:5:6.02:98,6,0	1/1:2,6:8:15.05:246,15,0	0/0:6,0:6:9.03:0,9,111	0/1:2,3:5:28.16:89,0,28	1/1:1,13:14:30.10:492,30,0	1/1:2,4:5:6.02:98,6,0	1/1:2,2:4:6.02:98,6,0	./.	1/1:3,0:3:3.01:49,3,0	./.	./.	./.	1/1:3,7:10:18.06:295,18,0	1/1:1,3:5:9.03:148,9,0	./.	1/1:2,11:14:36.11:568,36,0
chr10	31118833	.	T	TTA	132.37	PASS	AB=1.000;AC=5;AF=0.096;AN=52;BaseQRankSum=1.091;DP=207;FS=1.787;HRun=0;HaplotypeScore=39.1805;InbreedingCoeff=0.3126;MQ=83.30;MQ0=7;MQRankSum=0.121;QD=2.76;ReadPosRankSum=-0.167;VQSLOD=1.4962;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:6:18.06:0,18,224	0/0:2,0:2:6.02:0,6,76	0/0:18,0:6:3.01:0,3,31	0/1:44,0:17:18.44:42,0,18	0/0:7,0:7:21.05:0,21,251	0/0:2,0:2:6.02:0,6,76	0/0:2,0:2:6.02:0,6,76	0/0:42,0:41:99:0,99,1248	0/0:5,0:5:12.04:0,12,151	1/1:0,3:3:9.03:148,9,0	1/1:0,1:1:3.01:50,3,0	0/0:3,0:3:9.03:0,9,114	0/0:2,0:2:6.01:0,6,62	0/0:3,0:3:6.02:0,6,76	0/0:3,0:3:6.02:0,6,76	0/0:6,0:6:18.06:0,18,227	0/0:14,0:14:24.06:0,24,290	0/0:5,0:4:6.02:0,6,75	0/0:4,0:4:9.03:0,9,114	0/0:4,0:4:12.03:0,12,137	0/0:1,0:1:3:0,3,25	./.	./.	0/0:1,0:1:3.01:0,3,37	0/0:8,0:8:15.05:0,15,189	0/0:3,0:3:9.02:0,9,101	0/0:3,0:3:9.03:0,9,112	0/0:15,0:15:45.14:0,45,568
chr10	31121134	.	A	AG	2066.85	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-7.540;DP=615;FS=4.218;HRun=1;HaplotypeScore=56.7410;InbreedingCoeff=0.9829;MQ=85.31;MQ0=0;MQRankSum=0.504;QD=39.75;ReadPosRankSum=0.628;VQSLOD=4.2090;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:57.15:0,57,710	0/0:8,0:8:24.08:0,24,312	0/0:17,0:17:51.14:0,51,630	0/0:21,0:21:56.89:0,57,622	0/0:33,0:33:96.30:0,96,1231	0/0:25,0:25:75.22:0,75,936	0/0:17,0:17:51.15:0,51,647	0/0:49,0:49:99:0,141,1776	0/0:21,0:21:63.06:0,63,781	1/1:1,28:29:84.28:1256,84,0	1/1:1,22:23:66.05:932,66,0	0/0:25,0:25:69.21:0,69,882	0/0:29,0:29:87.22:0,87,1059	0/0:19,0:19:57.19:0,57,740	0/0:30,0:30:81.26:0,81,1051	0/0:17,0:17:51.16:0,51,650	0/0:19,0:19:57.17:0,57,724	0/0:9,0:9:24.05:0,24,294	0/0:20,0:20:60.19:0,60,767	0/0:24,0:24:66.19:0,66,840	0/0:22,0:22:66.19:0,66,823	0/0:21,0:21:63.20:0,63,806	0/0:24,0:24:69.22:0,69,896	0/0:16,0:16:48.09:0,48,576	0/0:21,0:21:60.18:0,60,764	0/0:18,1:19:12.22:0,12,645	0/0:23,0:23:66.16:0,66,800	0/0:14,0:14:42.14:0,42,545
chr10	31121767	.	CTCTCTCTCTGTG	C	6062.02	PASS	AB=1.000;AC=23;AF=0.442;AN=52;BaseQRankSum=1.006;DP=561;FS=20.632;HRun=0;HaplotypeScore=145.2651;InbreedingCoeff=0.2609;MQ=59.35;MQ0=48;MQRankSum=5.197;QD=19.18;ReadPosRankSum=3.733;VQSLOD=1.8459;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:35,0:31:56.40:873,56,0	0/0:7,0:7:2.90:0,3,16	0/0:33,0:21:62.65:0,63,1071	0/0:28,0:12:20.88:0,21,266	./.	1/1:18,0:17:21.15:582,21,0	./.	0/1:19,0:13:13.49:361,0,13	0/0:22,0:19:51.16:0,51,956	0/0:25,0:21:63.14:0,63,1152	0/0:19,0:18:30.10:0,30,476	0/1:28,0:26:68.42:467,0,68	0/1:24,0:24:2.87:3,0,68	0/1:18,0:15:71.64:321,0,72	0/0:25,0:24:63.21:0,63,1169	0/1:17,0:17:18.41:48,0,18	1/1:21,0:19:48.12:720,48,0	0/1:14,0:9:1.70:44,0,2	1/1:2,19:21:51.87:927,52,0	1/1:21,0:20:5.34:60,5,0	1/1:14,0:12:17.66:277,18,0	0/0:11,0:10:6.49:0,6,99	0/0:14,0:12:2.47:0,2,23	0/0:27,0:24:3.01:0,3,71	0/1:16,0:15:12.11:366,0,12	0/1:18,0:16:99:232,0,179	0/1:24,0:22:0.26:694,0,0	1/1:8,0:7:1.07:88,1,0
chr10	31121769	.	CTCTCTCTGTG	C	7165.42	PASS	AB=1.000;AC=29;AF=0.580;AN=50;BaseQRankSum=0.715;DP=572;FS=17.642;HRun=0;HaplotypeScore=134.4566;InbreedingCoeff=0.4454;MQ=60.23;MQ0=44;MQRankSum=4.275;QD=21.52;ReadPosRankSum=3.386;VQSLOD=3.1391;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:36,0:32:52.93:937,53,0	./.	0/0:33,0:21:62.65:0,63,1071	0/0:31,0:14:26.93:0,27,394	./.	1/1:18,0:17:42.10:613,42,0	./.	0/1:18,0:12:5.21:363,0,5	0/0:21,0:19:45.09:0,45,815	0/0:26,0:22:65.88:0,66,1107	0/0:18,0:17:30.09:0,30,469	0/1:27,0:26:12.04:748,0,12	0/1:24,0:24:24.05:32,0,24	0/1:20,0:17:15:431,0,15	0/0:27,0:26:69.23:0,69,1159	1/1:18,0:18:5.85:111,6,0	1/1:22,0:20:54.18:962,54,0	1/1:12,0:8:0.65:87,1,0	1/1:21,0:21:57.10:931,57,0	1/1:3,17:19:5.60:60,6,0	1/1:14,0:12:17.79:277,18,0	0/0:12,0:11:5.99:0,6,49	1/1:13,0:11:0.47:1,0,0	0/0:29,0:26:3.01:0,3,47	1/1:16,0:15:4.41:365,4,0	0/1:20,0:19:87.27:424,0,87	1/1:25,0:23:13.49:684,13,0	1/1:8,0:7:9.32:139,9,0
chr10	31121773	.	CTCTGTG	C	8580.96	PASS	AB=0.806;AC=32;AF=0.667;AN=48;BaseQRankSum=-0.760;DP=557;FS=8.794;HRun=0;HaplotypeScore=105.6485;InbreedingCoeff=0.7487;MQ=62.58;MQ0=34;MQRankSum=3.071;QD=26.98;ReadPosRankSum=2.199;VQSLOD=4.0321;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:35,0:31:63.04:1018,63,0	./.	0/0:36,0:24:71.68:0,72,1256	0/0:32,0:15:29.50:0,30,450	./.	1/1:19,0:19:51.17:819,51,0	./.	1/1:17,0:12:30.01:467,30,0	0/0:21,0:19:41.84:0,42,745	0/0:26,0:23:41.81:0,42,992	0/0:19,0:18:30.10:0,30,496	1/1:28,1:28:58.96:1104,59,0	1/1:24,0:24:8.61:146,9,0	1/1:19,0:17:42.08:641,42,0	0/0:28,0:27:72.22:0,72,1122	1/1:17,0:17:5.69:111,6,0	1/1:23,0:21:57.17:898,57,0	1/1:12,0:8:2.51:71,3,0	1/1:21,0:21:57.15:931,57,0	1/1:20,0:19:5.34:60,5,0	1/1:12,0:10:18.06:277,18,0	0/0:2,7:8:0:0,0,0	0/1:4,7:9:0.18:0,0,0	./.	1/1:13,0:13:29.97:458,30,0	0/1:17,0:16:25.82:650,0,26	1/1:22,2:24:50.89:736,51,0	1/1:5,0:5:12.04:193,12,0
chr10	31121775	.	CTGTG	C	8549.04	PASS	AB=0.765;AC=32;AF=0.667;AN=48;BaseQRankSum=-1.262;DP=549;FS=7.714;HRun=0;HaplotypeScore=94.2749;InbreedingCoeff=0.7519;MQ=64.40;MQ0=27;MQRankSum=1.442;QD=27.31;ReadPosRankSum=2.026;VQSLOD=4.1492;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:34,0:32:67:1115,67,0	./.	0/0:37,0:25:74.67:0,75,1272	0/0:32,0:16:32.51:0,33,521	./.	1/1:18,0:18:51.17:828,51,0	./.	1/1:6,10:12:30.01:467,30,0	0/0:20,0:18:48.15:0,48,728	0/0:26,0:24:66.06:0,66,1045	0/0:20,0:19:36.12:0,36,576	1/1:25,1:28:66.17:1007,66,0	1/1:1,21:24:7.75:83,8,0	1/1:19,1:18:42.13:643,42,0	0/0:27,0:27:72.21:0,72,1078	1/1:0,0:17:5.83:65,6,0	1/1:22,0:21:56.78:858,57,0	1/1:4,0:6:3.01:41,3,0	1/1:21,0:21:57.15:931,57,0	1/1:19,0:18:5.55:60,6,0	1/1:10,0:9:18.06:277,18,0	0/0:8,0:8:0:0,0,0	0/1:11,0:9:0.08:0,0,0	./.	1/1:14,0:14:33.11:539,33,0	0/1:2,16:17:20.84:692,0,21	1/1:23,2:25:48.16:749,48,0	1/1:5,0:5:12.04:193,12,0
chr10	31122905	.	TAA	T	1317.10	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.136;DP=572;FS=1.208;HRun=11;HaplotypeScore=68.6190;InbreedingCoeff=0.9227;MQ=63.98;MQ0=0;MQRankSum=1.924;QD=23.11;ReadPosRankSum=0.528;VQSLOD=3.2871;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,108,1621	0/0:4,0:4:12.04:0,12,185	0/0:11,0:8:6.02:0,6,92	0/0:12,0:11:14.07:0,14,146	0/0:30,0:31:83.74:0,84,1195	0/0:17,0:19:51.17:0,51,768	0/0:17,0:18:48.15:0,48,703	0/0:24,0:24:51.17:0,51,784	0/0:17,0:17:39.13:0,39,599	1/1:4,23:27:69.14:727,69,0	1/1:4,26:30:69.02:711,69,0	0/0:21,0:21:57.14:0,57,822	0/0:22,0:22:63.21:0,63,951	0/0:24,0:24:66.22:0,66,998	0/0:24,0:24:66.22:0,66,997	0/0:30,0:30:81.23:0,81,1200	0/0:22,0:22:63.19:0,63,927	0/0:6,0:8:20.56:0,21,285	0/0:16,0:16:36.07:0,36,508	0/0:22,0:25:68.19:0,68,955	0/0:9,0:11:30.10:0,30,443	0/0:17,0:17:48.16:0,48,737	0/0:21,0:21:57.18:0,57,837	0/0:24,0:25:57.02:0,57,838	0/0:12,0:13:35.59:0,36,470	0/0:23,0:24:62.68:0,63,891	0/0:21,0:21:60.20:0,60,911	0/0:16,0:16:36.09:0,36,512
chr10	31123585	.	TGGTTTCAA	T	4266.34	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=11.484;DP=637;FS=1.739;HRun=0;HaplotypeScore=161.0371;InbreedingCoeff=0.9957;MQ=80.97;MQ0=0;MQRankSum=-9.318;QD=60.09;ReadPosRankSum=0.895;VQSLOD=5.0439;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:78.27:0,78,3286	0/0:10,0:10:21.07:0,21,888	0/0:21,0:21:42.10:0,42,1509	0/0:19,0:19:48.16:0,48,1947	0/0:25,0:25:57.18:0,57,2168	0/0:18,0:18:48.16:0,48,1974	0/0:14,0:14:33.11:0,33,1396	0/0:30,0:30:60.21:0,60,2469	0/0:20,0:20:51.13:0,51,2010	1/1:7,25:32:75.26:1908,75,0	1/1:8,31:39:93.32:2358,93,0	0/0:24,0:24:66.21:0,66,2633	0/0:21,0:21:54.17:0,54,2121	0/0:24,0:24:60.21:0,60,2478	0/0:36,0:36:96.33:0,96,3973	0/0:27,0:27:69.21:0,69,2540	0/0:13,0:13:30.10:0,30,1239	0/0:10,0:10:27.09:0,27,977	0/0:22,0:22:51.18:0,51,1966	0/0:30,0:30:87.30:0,87,3609	0/0:20,0:20:48.16:0,48,1990	0/0:26,0:26:60.21:0,60,2531	0/0:20,0:20:51.18:0,51,2151	0/0:8,0:8:24.08:0,24,872	0/0:13,0:13:33.11:0,33,1387	0/0:31,0:31:81.27:0,81,3200	0/0:37,0:36:99:0,102,4314	0/0:14,0:14:36.12:0,36,1523
chr10	31124613	.	A	AT	1540.29	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.782;DP=616;FS=11.600;HRun=1;HaplotypeScore=61.3135;InbreedingCoeff=0.9996;MQ=75.19;MQ0=0;MQRankSum=-1.593;QD=35.01;ReadPosRankSum=-0.376;VQSLOD=2.4694;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,108,1365	0/0:12,0:12:36.12:0,36,465	0/0:16,0:16:45.10:0,45,540	0/0:20,0:20:54.15:0,54,671	0/0:25,0:25:63.19:0,63,804	0/0:20,0:20:60.18:0,60,764	0/0:24,0:24:72.21:0,72,906	0/0:28,0:28:84.23:0,84,1019	0/0:23,0:23:69.21:0,69,881	1/1:5,26:31:87.28:1202,87,0	1/1:2,11:13:33.10:460,33,0	0/0:20,0:20:57.17:0,57,725	0/0:19,0:19:54.15:0,54,671	0/0:32,0:32:93.28:0,93,1179	0/0:17,0:17:51.17:0,51,662	0/0:16,0:16:48.14:0,48,609	0/0:22,0:22:63.18:0,63,802	0/0:12,0:12:33.05:0,33,408	0/0:22,0:21:66.13:0,66,773	0/0:29,0:29:87.20:0,87,1094	0/0:19,0:19:48.16:0,48,623	0/0:15,0:15:45.10:0,45,552	0/0:18,0:18:51.14:0,51,633	0/0:33,0:33:93.25:0,93,1161	0/0:25,0:25:72.21:0,72,907	0/0:19,0:19:57.19:0,57,740	0/0:31,0:31:93.29:0,93,1192	0/0:17,0:17:42.12:0,42,530
chr10	31125348	.	TGTC	T	2752.67	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=10.260;DP=593;FS=8.155;HRun=0;HaplotypeScore=81.5100;InbreedingCoeff=0.8096;MQ=72.23;MQ0=0;MQRankSum=-0.881;QD=44.40;ReadPosRankSum=1.303;VQSLOD=5.3031;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:42.14:0,42,1026	0/0:12,0:12:36.12:0,36,887	0/0:10,0:10:24.55:0,25,557	0/1:8,0:8:6.87:7,0,382	0/0:30,0:30:90.31:0,90,2139	0/0:19,0:19:57.20:0,57,1405	0/0:11,0:11:33.10:0,33,734	0/0:32,0:32:96.33:0,96,2250	0/0:24,0:24:72.25:0,72,1725	1/1:0,26:26:78.27:1454,78,0	1/1:0,28:28:81.19:1418,81,0	0/0:29,0:29:84.29:0,84,2008	0/0:28,0:28:84.29:0,84,2045	0/0:23,0:23:69.24:0,69,1696	0/0:19,0:19:57.18:0,57,1330	0/0:23,0:23:69.24:0,69,1677	0/0:7,0:7:21.07:0,21,517	0/0:14,0:14:36.08:0,36,817	0/0:12,0:12:36.12:0,36,860	0/0:33,0:33:99:0,99,2351	0/0:12,0:12:36.12:0,36,887	0/0:28,0:28:84.29:0,84,2067	0/0:21,0:21:63.22:0,63,1503	0/0:17,0:17:51.18:0,51,1247	0/0:28,0:28:84.27:0,84,1986	0/0:25,0:25:75.26:0,75,1831	0/0:29,0:29:87.30:0,87,2144	0/0:31,0:31:93.32:0,93,2111
chr10	31126281	.	T	TTTACTACCAATCTTTGCATTGA	117764.64	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=0.451;DP=653;FS=16.382;HRun=0;HaplotypeScore=320.4897;InbreedingCoeff=0.9901;MQ=60.29;MQ0=0;MQRankSum=-12.279;QD=200.28;ReadPosRankSum=1.546;VQSLOD=3.8040;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,3:14:33.11:2540,33,0	1/1:6,5:13:33.11:2772,33,0	0/0:13,0:13:36.12:0,36,1453	0/0:12,0:12:33.10:0,33,1314	1/1:26,11:42:99:7592,111,0	1/1:10,4:17:39.13:3236,39,0	1/1:20,2:24:63.21:4942,63,0	1/1:45,0:45:99:7119,123,0	0/0:18,0:18:54.19:0,54,3127	1/1:18,8:33:99:7382,99,0	1/1:15,12:30:87.30:6186,87,0	1/1:13,7:22:56.98:5069,57,0	1/1:28,6:35:96.33:7368,96,0	1/1:15,8:27:66.22:4999,66,0	0/0:22,0:22:66.22:0,66,3518	1/1:13,5:19:51.18:4406,51,0	1/1:7,1:10:15.05:1057,15,0	1/1:8,3:14:36.12:2438,36,0	1/1:13,2:18:48.16:2846,48,0	1/1:21,8:34:96.20:7103,96,0	1/1:6,3:10:27.09:2357,27,0	1/1:21,7:31:81.28:6219,81,0	1/1:20,8:31:87.30:6793,87,0	1/1:9,1:10:15.05:783,15,0	1/1:23,10:35:87.30:6979,87,0	1/1:20,14:39:99:9443,114,0	1/1:17,6:25:69.24:6255,69,0	1/1:6,3:10:24.08:1883,24,0
chr10	31127712	.	A	ATTT	1734.78	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-1.381;DP=561;FS=4.855;HRun=10;HaplotypeScore=85.1989;InbreedingCoeff=0.9716;MQ=76.79;MQ0=0;MQRankSum=-0.204;QD=34.02;ReadPosRankSum=-3.303;VQSLOD=2.6165;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:72.09:0,72,859	0/0:12,0:12:27.02:0,27,317	0/0:12,0:14:30.34:0,30,334	0/0:7,0:10:23.66:0,24,213	0/0:19,0:20:57.08:0,57,662	0/0:31,0:31:75.09:0,75,884	0/0:16,0:16:29.98:0,30,351	0/0:36,0:38:90.03:0,90,1057	0/0:13,0:14:36.01:0,36,419	1/1:9,14:25:54.14:940,54,0	1/1:3,19:26:66.05:917,66,0	0/0:19,0:20:51.03:0,51,602	0/0:26,0:26:57.11:0,57,693	0/0:7,0:8:16.40:0,16,216	0/0:20,0:20:51.08:0,51,608	0/0:26,0:26:66.12:0,66,790	0/0:20,0:21:52.51:0,53,654	0/0:17,0:18:42.01:0,42,492	0/0:21,0:22:43.40:0,43,544	0/0:21,0:20:42.03:0,42,511	0/0:17,0:18:39:0,39,456	0/0:21,0:22:57.06:0,57,673	0/0:21,0:22:59.11:0,59,681	0/0:16,0:16:45.11:0,45,547	0/0:18,0:18:44.95:0,45,528	0/0:15,0:15:11.86:0,12,377	0/0:24,0:24:63.17:0,63,766	0/0:7,0:7:18.03:0,18,219
chr10	31128121	.	AT	A	2628.82	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-7.849;DP=618;FS=2.633;HRun=4;HaplotypeScore=174.5054;InbreedingCoeff=0.9876;MQ=74.13;MQ0=0;MQRankSum=-0.218;QD=31.30;ReadPosRankSum=2.232;VQSLOD=1.7928;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:48.12:0,48,634	0/0:10,0:10:30.07:0,30,400	0/0:16,0:16:45.03:0,45,536	0/0:14,0:14:11.74:0,12,409	0/0:34,0:34:96.29:0,96,1295	0/0:22,0:22:63.18:0,63,841	0/0:17,0:17:51.17:0,51,713	0/0:37,0:37:99:0,102,1385	0/0:21,0:21:57.19:0,57,797	1/1:2,26:28:75.23:900,75,0	1/1:0,22:22:63.19:755,63,0	0/0:23,0:23:69.23:0,69,965	0/0:23,0:23:66.21:0,66,907	0/0:21,0:21:63.21:0,63,882	1/1:1,33:34:93.29:1116,93,0	0/0:19,0:19:57.19:0,57,797	0/0:12,0:11:36.12:0,36,504	0/0:14,0:14:42.12:0,42,570	0/0:28,0:28:72.24:0,72,1007	0/0:30,0:30:90.24:0,90,1220	0/0:13,0:13:27.07:0,27,360	0/0:22,0:22:66.22:0,66,924	0/0:26,0:26:75.24:0,75,1032	0/0:13,0:13:39.12:0,39,527	0/0:18,0:18:54.18:0,54,756	0/0:22,1:23:30.21:0,30,846	0/0:42,0:42:99:0,114,1573	0/0:20,0:20:54.18:0,54,754
chr10	31128224	.	T	TA	4381.30	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=9.862;DP=705;FS=5.533;HRun=1;HaplotypeScore=191.5705;InbreedingCoeff=0.9965;MQ=74.74;MQ0=0;MQRankSum=-11.577;QD=39.47;ReadPosRankSum=0.533;VQSLOD=4.0156;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:63.11:0,63,783	0/0:8,0:8:21.07:0,21,273	0/0:24,0:24:69.22:0,69,891	0/0:17,0:17:51.16:0,51,639	0/0:37,0:37:99:0,108,1369	0/0:33,0:33:99:0,99,1285	0/0:20,0:20:60.19:0,60,778	0/0:39,0:39:99:0,108,1389	0/0:17,0:17:51.17:0,51,662	0/0:22,0:22:63.20:0,63,818	0/0:22,0:22:63.20:0,63,817	0/0:25,0:25:75.22:0,75,951	0/0:33,0:33:99:0,99,1270	0/0:27,0:27:75.24:0,75,973	0/0:31,0:31:90.27:0,90,1152	0/0:30,0:30:90.28:0,90,1153	0/0:29,0:29:87.26:0,87,1113	0/0:16,0:16:48.15:0,48,610	1/1:4,17:21:60.11:827,60,0	1/1:1,29:30:87.29:1294,87,0	1/1:2,11:13:18.06:269,18,0	0/0:25,0:25:52.24:0,52,864	0/0:26,0:26:72.22:0,72,919	0/0:21,0:21:60.20:0,60,779	0/0:28,0:28:84.27:0,84,1079	0/0:30,0:30:80.85:0,81,1022	1/1:2,45:47:99:1991,135,0	0/0:12,0:12:33.11:0,33,428
chr10	31129059	.	AC	A	1703.26	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=10.664;DP=586;FS=1.876;HRun=3;HaplotypeScore=59.9418;InbreedingCoeff=0.9952;MQ=87.36;MQ0=0;MQRankSum=-4.396;QD=31.54;ReadPosRankSum=-0.413;VQSLOD=3.3213;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:57.17:0,57,819	0/0:8,0:8:24.08:0,24,346	0/0:25,0:25:72.24:0,72,1037	0/0:18,0:18:38.82:0,39,540	0/0:24,0:24:72.23:0,72,1015	0/0:27,0:27:75.23:0,75,1043	0/0:19,0:19:51.17:0,51,734	0/0:24,0:24:63.20:0,63,875	0/0:27,0:27:81.26:0,81,1139	1/1:2,28:30:84.26:1041,84,0	1/1:0,24:24:66.12:783,66,0	0/0:27,0:27:81.26:0,81,1148	0/0:18,0:18:51.14:0,51,698	0/0:29,0:29:87.28:0,87,1236	0/0:28,0:28:84.26:0,84,1174	0/0:24,0:24:72.24:0,72,1035	0/0:7,0:7:21.07:0,21,302	0/0:11,0:11:30.10:0,30,432	0/0:12,0:12:30.09:0,30,416	0/0:28,0:28:81.27:0,81,1166	0/0:22,0:22:66.11:0,66,923	0/0:13,0:13:39.13:0,39,560	0/0:26,0:26:72.24:0,72,1024	0/0:9,0:9:24.08:0,24,346	0/0:18,0:18:45.15:0,45,647	0/0:22,0:22:66.21:0,66,933	0/0:32,0:31:96.32:0,96,1354	0/0:13,0:13:39.10:0,39,525
chr10	31129185	.	C	CA	1614.80	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-5.133;DP=526;FS=4.621;HRun=4;HaplotypeScore=46.8494;InbreedingCoeff=0.9851;MQ=71.73;MQ0=0;MQRankSum=-0.805;QD=34.36;ReadPosRankSum=0.424;VQSLOD=3.9952;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:39.07:0,39,419	0/0:9,0:9:27.08:0,27,306	0/0:9,0:9:24.06:0,24,265	0/0:6,0:6:15.04:0,15,170	0/0:31,0:31:90.26:0,90,1020	0/0:20,0:20:57.16:0,57,647	0/0:7,0:7:21.06:0,21,238	0/0:28,0:28:78.17:0,78,856	0/0:16,0:16:48.14:0,48,545	1/1:0,17:17:51.17:698,51,0	1/1:1,29:30:78.21:1039,78,0	0/0:20,0:20:54.15:0,54,613	0/0:19,0:19:51.13:0,51,568	0/0:19,0:19:54.14:0,54,602	0/0:15,0:15:39.09:0,39,430	0/0:18,0:18:48.14:0,48,544	0/0:20,0:20:57.16:0,57,646	0/0:23,0:23:63.18:0,63,714	0/0:12,0:12:30.08:0,30,334	0/0:38,0:38:99:0,108,1225	0/0:10,0:10:30.09:0,30,340	0/0:9,0:9:27.08:0,27,306	0/0:23,0:23:66.19:0,66,749	0/0:8,0:8:21.06:0,21,238	0/0:17,0:17:51.15:0,51,579	0/0:32,1:33:52.21:0,52,980	0/0:41,0:41:99:0,117,1318	0/0:13,0:13:39.11:0,39,442
chr10	31132313	.	T	TA	1602.20	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-1.611;DP=552;FS=0.000;HRun=4;HaplotypeScore=56.8289;InbreedingCoeff=0.9976;MQ=78.14;MQ0=0;MQRankSum=-3.824;QD=36.41;ReadPosRankSum=1.735;VQSLOD=3.7951;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:63.19:0,63,768	0/0:7,0:7:21.07:0,21,260	0/0:16,0:16:45.14:0,45,550	0/0:14,0:14:32.69:0,33,380	0/0:16,0:16:48.15:0,48,595	0/0:22,0:22:66.19:0,66,803	0/0:16,0:16:48.15:0,48,595	0/0:29,0:29:87.26:0,87,1064	0/0:24,0:24:72.23:0,72,892	1/1:1,23:24:69.23:989,69,0	1/1:1,19:20:51.17:734,51,0	0/0:30,0:30:87.27:0,87,1078	0/0:15,0:15:45.13:0,45,544	0/0:29,0:29:78.20:0,78,966	0/0:20,0:20:57.18:0,57,706	0/0:20,0:20:60.19:0,60,744	0/0:19,0:19:57.14:0,57,689	0/0:12,0:12:36.11:0,36,446	0/0:13,0:13:39.12:0,39,483	0/0:22,0:22:66.21:0,66,818	0/0:19,0:19:57.18:0,57,706	0/0:17,0:17:51.16:0,51,632	0/0:29,0:29:75.22:0,75,917	0/0:20,0:20:60.16:0,60,717	0/0:18,0:18:45.12:0,45,543	0/0:15,0:15:45.14:0,45,558	0/0:30,0:30:78.18:0,78,914	0/0:14,0:14:37.45:0,37,480
chr10	31132518	.	GA	G	451.29	PASS	AB=0.720;AC=3;AF=0.054;AN=56;BaseQRankSum=6.003;DP=484;FS=0.000;HRun=9;HaplotypeScore=49.7727;InbreedingCoeff=0.7254;MQ=57.41;MQ0=17;MQRankSum=-1.625;QD=11.88;ReadPosRankSum=-1.322;VQSLOD=2.1640;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:54.58:0,55,598	0/0:9,0:9:27.08:0,27,311	0/0:24,0:3:5.99:0,6,54	0/0:24,0:9:6.97:0,7,43	0/0:21,0:21:60.12:0,60,654	0/0:13,0:11:30.05:0,30,331	0/0:13,0:13:36.11:0,36,413	0/0:21,0:20:43.52:0,44,443	0/0:9,0:9:24.07:0,24,277	1/1:13,7:20:37.53:340,38,0	0/1:11,7:16:1.30:217,0,1	0/0:17,0:18:47.96:0,48,520	0/0:14,0:14:35.36:0,35,410	0/0:19,0:19:48.14:0,48,550	0/0:14,0:14:42.10:0,42,472	0/0:16,0:16:39.11:0,39,441	0/0:24,0:24:65.19:0,65,711	0/0:19,0:19:54.13:0,54,609	0/0:15,0:12:32.89:0,33,344	0/0:21,1:21:30.29:0,30,551	0/0:12,0:12:25.13:0,25,301	0/0:10,0:10:20.89:0,21,221	0/0:12,0:11:24.06:0,24,269	0/0:14,0:14:36.05:0,36,389	0/0:21,0:21:54.15:0,54,613	0/0:25,1:25:18.84:0,19,633	0/0:21,0:21:52.38:0,52,580	0/0:11,0:11:33.10:0,33,381
chr10	31132534	.	G	GA	810.04	PASS	AB=0.948;AC=7;AF=0.125;AN=56;BaseQRankSum=5.770;DP=516;FS=0.000;HRun=10;HaplotypeScore=57.6889;InbreedingCoeff=0.5397;MQ=66.53;MQ0=18;MQRankSum=-1.128;QD=6.09;ReadPosRankSum=-3.499;VQSLOD=0.2491;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:52.94:0,53,436	0/0:11,0:11:23.96:0,24,197	0/1:28,0:7:7.26:7,0,55	0/1:28,0:16:33.20:33,0,97	0/0:23,0:24:45:0,45,433	0/0:12,0:11:19.32:0,19,170	0/0:13,0:13:35.95:0,36,295	0/0:29,0:28:65.73:0,66,530	0/0:8,0:10:22.05:0,22,159	1/1:17,9:26:62.82:601,63,0	1/1:14,6:19:14.03:298,14,0	0/0:20,0:20:47.93:0,48,393	0/0:16,0:16:38.92:0,39,317	0/0:16,0:17:43.98:0,44,351	0/0:20,0:20:50.93:0,51,417	0/0:11,0:11:29.97:0,30,246	0/0:22,0:23:52.94:0,53,424	0/0:22,0:22:59.92:0,60,492	0/0:16,0:13:19.18:0,19,130	0/0:23,0:23:50.89:0,51,410	0/0:9,0:10:25.90:0,26,192	0/0:9,0:8:17.95:0,18,144	0/0:16,0:15:32.61:0,33,253	0/0:11,0:11:23.97:0,24,197	0/0:16,0:16:41.95:0,42,345	0/1:24,4:28:4.47:4,0,365	0/0:19,0:20:46.92:0,47,375	0/0:12,0:12:20.96:0,21,172
chr10	31133165	.	T	TACACAC	2849.83	PASS	AB=0.875;AC=44;AF=0.846;AN=52;BaseQRankSum=-2.796;DP=564;FS=0.000;HRun=0;HaplotypeScore=138.8591;InbreedingCoeff=0.3315;MQ=59.52;MQ0=8;MQRankSum=-0.980;QD=6.21;ReadPosRankSum=0.390;VQSLOD=2.3509;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:26:4.26:50,4,0	1/1:9,0:9:2.99:23,3,0	./.	./.	1/1:13,0:25:11.91:154,12,0	1/1:14,0:22:9.02:155,9,0	0/1:26,0:26:44.97:119,0,45	1/1:25,0:25:5.52:47,6,0	0/0:10,0:23:9.55:0,10,75	0/0:12,0:23:13.59:0,14,165	0/0:12,0:23:9.03:0,9,126	1/1:9,0:16:9.03:113,9,0	1/1:12,0:18:11.52:133,12,0	1/1:16,0:23:6.02:85,6,0	1/1:10,0:15:3.01:38,3,0	1/1:13,0:24:5.16:75,5,0	0/1:10,0:15:22.50:107,0,23	1/1:11,1:18:11.16:177,11,0	1/1:15,0:15:17.07:293,17,0	1/1:11,4:15:3.01:96,3,0	1/1:25,0:34:3.01:52,3,0	1/1:11,0:24:7.60:113,8,0	1/1:7,0:14:2.70:38,3,0	1/1:13,0:22:24.08:325,24,0	1/1:13,0:32:3.32:124,3,0	1/1:11,0:11:9.61:126,10,0	1/1:19,1:21:21.92:407,22,0	1/1:3,0:4:9.03:141,9,0
chr10	31133483	.	AT	A	1583.70	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=10.899;DP=621;FS=3.565;HRun=3;HaplotypeScore=69.9841;InbreedingCoeff=0.9973;MQ=85.89;MQ0=0;MQRankSum=-4.374;QD=31.05;ReadPosRankSum=1.763;VQSLOD=3.7462;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:90.27:0,90,1250	0/0:8,0:8:21.03:0,21,278	0/0:26,0:26:69.19:0,69,937	0/0:18,0:18:51.17:0,51,725	0/0:30,0:30:90.28:0,90,1259	0/0:28,0:28:81.27:0,81,1166	0/0:15,0:15:45.15:0,45,648	0/0:34,0:34:99:0,102,1449	0/0:25,0:25:75.25:0,75,1080	1/1:1,25:26:78.25:966,78,0	1/1:1,24:25:60.19:739,60,0	0/0:16,0:16:48.16:0,48,691	0/0:24,0:24:69.23:0,69,987	0/0:17,0:17:48.16:0,48,691	0/0:21,0:21:63.21:0,63,907	0/0:27,0:27:81.27:0,81,1164	0/0:17,0:17:48.16:0,48,691	0/0:21,0:21:60.20:0,60,862	0/0:17,0:17:48.16:0,48,688	0/0:30,0:30:84.23:0,84,1165	0/0:21,0:21:60.15:0,60,823	0/0:30,0:30:81.26:0,81,1145	0/0:19,0:19:54.18:0,54,778	0/0:10,0:10:27.09:0,27,388	0/0:19,0:19:57.18:0,57,804	0/0:25,1:26:41.05:0,41,1024	0/0:24,0:24:72.24:0,72,1037	0/0:17,0:17:48.16:0,48,691
chr10	31133529	.	GCAACAACAA	G	2730.58	PASS	AB=0.935;AC=5;AF=0.089;AN=56;BaseQRankSum=10.000;DP=675;FS=0.000;HRun=0;HaplotypeScore=190.3924;InbreedingCoeff=0.7798;MQ=67.76;MQ0=3;MQRankSum=-8.332;QD=31.75;ReadPosRankSum=1.245;VQSLOD=3.3027;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:40:89.24:0,89,3834	0/0:10,0:10:27.09:0,27,1219	0/0:40,0:27:53.98:0,54,1651	0/0:24,0:21:34.47:0,34,1221	0/0:29,0:30:69.15:0,69,2932	0/0:28,0:28:72.23:0,72,2952	0/0:20,0:20:39.12:0,39,1559	0/0:27,0:27:54.18:0,54,2169	0/0:28,0:28:75.26:0,75,3375	1/1:10,21:31:60.20:1602,60,0	1/1:13,13:26:45.15:1217,45,0	0/0:21,0:21:60.21:0,60,2630	0/0:29,0:29:78.27:0,78,3513	0/0:28,0:28:81.28:0,81,3529	0/0:21,0:21:36.12:0,36,1663	0/0:19,0:20:51.17:0,51,2125	0/0:18,0:18:45.13:0,45,1963	0/0:19,0:19:39.05:0,39,1437	0/0:20,0:20:42.12:0,42,1745	0/0:25,0:26:66.21:0,66,2576	0/0:29,0:33:72.25:0,72,3190	0/0:21,0:21:51.17:0,51,2226	0/0:10,0:11:33.11:0,33,1376	0/0:17,0:17:42.14:0,42,1901	0/0:19,0:21:51.18:0,51,2201	0/1:27,2:29:40.97:41,0,2369	0/0:23,0:24:69.24:0,69,3118	0/0:13,0:13:39.13:0,39,1809
chr10	31134340	.	T	TGTCG	3214.67	PASS	AB=0.968;AC=5;AF=0.089;AN=56;BaseQRankSum=-0.778;DP=718;FS=1.899;HRun=0;HaplotypeScore=114.5519;InbreedingCoeff=0.7455;MQ=87.03;MQ0=1;MQRankSum=-4.478;QD=40.18;ReadPosRankSum=0.292;VQSLOD=3.7908;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,135,2455	0/0:15,0:15:42.14:0,42,764	0/0:24,0:24:54.18:0,54,959	0/0:27,0:27:72.24:0,72,1242	0/0:17,0:17:39.10:0,39,676	0/0:22,0:22:57.18:0,57,1007	0/0:22,0:22:63.18:0,63,1084	0/0:34,0:34:90.29:0,90,1580	0/0:24,0:24:66.23:0,66,1200	1/1:7,27:34:84.27:2095,84,0	1/1:2,13:15:42.14:1096,42,0	0/0:22,0:22:57.20:0,57,1031	0/0:29,0:29:75.23:0,75,1324	0/0:32,0:32:87.30:0,87,1569	0/0:40,0:40:99:0,117,2084	0/0:31,0:31:90.31:0,90,1623	0/0:26,0:26:69.24:0,69,1254	0/0:3,0:3:6.02:0,6,109	0/0:19,0:19:48.16:0,48,828	0/0:20,0:20:57.18:0,57,1006	0/0:27,0:27:72.25:0,72,1310	0/0:23,0:23:54.17:0,54,953	0/0:25,0:25:69.22:0,69,1218	0/0:22,0:22:63.22:0,63,1146	0/0:23,0:22:57.17:0,57,1004	0/1:29,1:30:99:154,0,1071	0/0:46,0:46:99:0,126,2260	0/0:13,0:13:39.13:0,39,709
chr10	31135186	.	T	TG	1538.21	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-7.285;DP=411;FS=3.163;HRun=1;HaplotypeScore=39.2843;InbreedingCoeff=0.8909;MQ=72.88;MQ0=0;MQRankSum=0.290;QD=39.44;ReadPosRankSum=-0.388;VQSLOD=3.5255;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:78.24:0,78,996	0/0:3,0:3:9.03:0,9,117	0/0:7,0:7:17.93:0,18,193	0/0:7,0:7:16.28:0,16,168	0/0:24,0:24:66.16:0,66,799	0/0:18,0:18:48.16:0,48,620	0/0:5,0:5:15.05:0,15,195	0/0:40,0:40:99:0,111,1395	0/0:11,0:11:33.09:0,33,414	1/1:0,20:20:60.19:878,60,0	1/1:0,19:19:54.13:782,54,0	0/0:12,0:12:36.11:0,36,456	0/0:7,0:7:21.04:0,21,245	0/0:6,0:6:15.03:0,15,179	0/0:15,0:15:45.14:0,45,571	0/0:21,0:21:57.16:0,57,702	0/0:31,0:31:90.20:0,90,1115	0/0:15,0:15:39.11:0,39,487	0/0:17,0:17:48.15:0,48,607	0/0:14,0:14:42.12:0,42,530	0/0:7,0:7:21.07:0,21,272	0/0:2,0:2:6.02:0,6,78	0/0:9,0:9:27.08:0,27,339	0/0:7,0:7:18.06:0,18,233	0/0:14,0:14:42.12:0,42,529	0/0:27,0:27:81.23:0,81,998	0/0:18,0:18:54.16:0,54,675	0/0:9,0:9:27.09:0,27,350
chr10	31137333	.	CCTGTGGCTT	C	1850.90	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.926;DP=744;FS=0.737;HRun=0;HaplotypeScore=206.8573;InbreedingCoeff=0.9821;MQ=79.05;MQ0=0;MQRankSum=-2.772;QD=43.04;ReadPosRankSum=-2.574;VQSLOD=2.8515;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:69,0:69:99:0,187,7505	0/0:10,0:10:30.10:0,30,1200	0/0:32,0:32:75.26:0,75,3285	0/0:22,0:22:53.40:0,53,2091	0/0:23,0:23:69.22:0,69,2759	0/0:21,0:21:60.16:0,60,2281	0/0:19,0:19:48.16:0,48,2105	0/0:28,0:28:66.23:0,66,2547	0/0:29,0:29:84.29:0,84,3741	1/1:0,25:25:72.09:1620,72,0	1/1:4,14:18:11.65:347,12,0	0/0:26,0:26:72.25:0,72,3313	0/0:34,0:34:87.30:0,87,4060	0/0:31,0:31:93.32:0,93,4301	0/0:30,0:30:84.29:0,84,3582	0/0:31,0:31:84.29:0,84,3779	0/0:39,0:39:99:0,117,5423	0/0:15,0:15:40.38:0,40,1814	0/0:14,0:14:39.13:0,39,1543	0/0:26,0:26:60.21:0,60,2331	0/0:43,0:43:99:0,117,4655	0/0:29,0:29:81.21:0,81,3342	0/0:25,0:25:75.26:0,75,3150	0/0:35,0:35:99:0,102,4737	0/0:14,0:14:36.12:0,36,1476	0/0:18,0:18:48.16:0,48,1758	0/0:25,0:25:69.24:0,69,3186	0/0:13,0:13:39.13:0,39,1797
chr10	31138057	.	TA	T	641.66	PASS	AB=0.844;AC=15;AF=0.268;AN=56;BaseQRankSum=9.295;DP=483;FS=1.532;HRun=14;HaplotypeScore=68.9792;InbreedingCoeff=0.3402;MQ=70.83;MQ0=0;MQRankSum=-4.331;QD=2.89;ReadPosRankSum=4.299;VQSLOD=-0.5227;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:15.49:0,15,139	0/0:7,0:8:20.86:0,21,182	0/1:11,1:9:12.17:12,0,43	0/0:14,0:12:14.88:0,15,123	0/0:21,2:24:9.64:0,10,348	0/1:13,2:15:5.28:5,0,215	0/0:13,1:15:6.25:0,6,179	0/1:28,3:31:8.42:8,0,325	0/1:16,2:18:5.20:5,0,226	1/1:23,0:23:34.16:97,34,0	1/1:29,0:29:17.99:75,18,0	0/0:14,0:14:21.90:0,22,194	0/0:20,1:22:14.46:0,14,273	0/0:17,0:17:31.24:0,31,270	0/0:21,1:22:24.44:0,24,358	0/0:13,2:15:15.37:0,15,264	0/0:16,0:16:33:0,33,292	0/0:12,0:12:30.01:0,30,272	1/1:8,5:13:8.75:61,9,0	0/1:5,14:20:15.04:191,0,15	0/1:10,3:16:26.49:26,0,150	0/0:11,0:12:4.65:0,5,157	0/1:19,3:22:11.18:11,0,178	0/0:5,0:6:8.85:0,9,70	0/0:17,2:20:12.26:0,12,234	0/0:25,1:26:25.95:0,26,435	1/1:5,17:22:48.39:319,48,0	0/0:7,0:7:18.01:0,18,163
chr10	31138066	.	AAAAAAT	A	2213.80	PASS	AB=0.912;AC=5;AF=0.089;AN=56;BaseQRankSum=7.591;DP=490;FS=1.921;HRun=0;HaplotypeScore=106.3063;InbreedingCoeff=0.7701;MQ=66.00;MQ0=0;MQRankSum=-5.806;QD=28.38;ReadPosRankSum=3.508;VQSLOD=3.2835;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:28.65:0,29,738	0/0:9,0:9:27.09:0,27,797	0/0:13,0:10:24.41:0,24,418	0/0:10,0:8:15.05:0,15,404	0/0:25,0:25:69.12:0,69,1653	0/0:15,0:15:45.12:0,45,1237	0/0:17,0:17:48.12:0,48,1208	0/0:34,0:34:99:0,100,2338	0/0:15,0:15:45.13:0,45,1218	1/1:1,20:21:60.10:1112,60,0	1/1:0,26:26:71.79:1174,72,0	0/0:11,0:11:33.05:0,33,984	0/0:22,0:22:66.19:0,66,1638	0/0:18,0:18:54.11:0,54,1351	0/0:19,0:19:57.18:0,57,1692	0/0:17,0:17:45.12:0,45,1176	0/0:17,0:17:48.08:0,48,1046	0/0:13,0:13:39.12:0,39,1132	0/0:14,0:14:39.01:0,39,643	0/0:24,0:24:72.18:0,72,1461	0/0:15,0:15:45.14:0,45,1160	0/0:12,0:12:33.09:0,33,700	0/0:19,0:19:51.13:0,51,1123	0/0:6,0:6:18.04:0,18,428	0/0:19,0:19:54.17:0,54,1405	0/1:28,3:31:56.69:57,0,2056	0/0:29,0:28:79.39:0,79,1513	0/0:8,0:8:24.07:0,24,670
chr10	31138263	.	CA	C	1431.20	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.961;DP=617;FS=5.798;HRun=8;HaplotypeScore=58.4864;InbreedingCoeff=0.9856;MQ=73.09;MQ0=0;MQRankSum=-0.748;QD=24.68;ReadPosRankSum=1.305;VQSLOD=4.4937;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:60.15:0,60,707	0/0:6,0:6:18.06:0,18,217	0/0:15,0:15:21.06:0,21,236	0/0:11,0:11:15.72:0,16,186	0/0:37,0:38:99:0,111,1296	0/0:27,1:28:49.26:0,49,877	0/0:20,0:20:57.65:0,58,690	0/0:35,0:35:87.25:0,87,1032	0/0:23,0:23:69.20:0,69,822	1/1:1,31:32:93.11:889,93,0	1/1:2,24:26:69.10:664,69,0	0/0:17,0:17:48.14:0,48,570	0/0:17,0:17:51.15:0,51,611	0/0:25,0:25:72.20:0,72,848	0/0:24,0:24:72.22:0,72,869	0/0:23,0:23:63.18:0,63,748	0/0:24,0:24:69.21:0,69,834	0/0:15,0:15:45.14:0,45,543	0/0:21,0:21:54.14:0,54,628	0/0:30,0:30:84.25:0,84,1003	0/0:22,0:22:66.20:0,66,797	0/0:22,0:23:60.04:0,60,690	0/0:22,0:22:57.16:0,57,677	0/0:8,0:8:24.07:0,24,289	0/0:20,0:20:60.18:0,60,725	0/0:28,1:29:52.25:0,52,894	0/0:31,0:31:87.25:0,87,1036	0/0:10,0:10:30.09:0,30,362
chr10	31138659	.	T	TC	1460.79	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-4.048;DP=601;FS=5.225;HRun=1;HaplotypeScore=56.8502;InbreedingCoeff=0.9906;MQ=88.58;MQ0=0;MQRankSum=-3.780;QD=37.46;ReadPosRankSum=1.576;VQSLOD=4.1215;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,108,1382	0/0:8,0:8:24.04:0,24,280	0/0:30,0:30:84.27:0,84,1090	0/0:15,0:15:45.15:0,45,582	0/0:37,0:37:99:0,111,1441	0/0:29,0:28:87.27:0,87,1117	0/0:23,0:23:69.21:0,69,881	0/0:46,0:46:99:0,135,1664	0/0:22,0:22:66.19:0,66,839	1/1:1,23:24:66.19:962,66,0	1/1:1,14:15:42.14:620,42,0	0/0:15,0:15:42.14:0,42,545	0/0:21,0:21:63.15:0,63,781	0/0:16,0:16:48.16:0,48,623	0/0:21,0:21:60.18:0,60,765	0/0:23,0:23:66.15:0,66,788	0/0:20,0:20:60.12:0,60,729	0/0:22,0:22:66.11:0,66,833	0/0:17,0:17:51.16:0,51,650	0/0:33,0:33:96.30:0,96,1229	0/0:27,0:27:81.24:0,81,1024	0/0:15,0:15:45.11:0,45,543	0/0:15,0:15:39.11:0,39,481	0/0:16,0:16:48.14:0,48,608	0/0:6,0:6:18.05:0,18,221	0/0:18,0:18:51.16:0,51,650	0/0:23,0:23:69.18:0,69,877	0/0:6,0:6:18.05:0,18,220
chr10	31139205	.	CTA	C	375.50	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.062;DP=492;FS=6.496;HRun=0;HaplotypeScore=75.2740;InbreedingCoeff=0.9792;MQ=76.26;MQ0=2;MQRankSum=-5.467;QD=16.33;ReadPosRankSum=2.186;VQSLOD=3.1697;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:74.55:0,75,1075	0/0:6,0:6:18.06:0,18,296	0/0:40,0:23:43.83:0,44,524	0/0:19,0:14:20.19:0,20,177	0/0:26,0:26:55.04:0,55,977	0/0:24,0:24:69.19:0,69,1186	0/0:15,0:15:40.06:0,40,659	0/0:25,0:25:65.63:0,66,953	0/0:16,0:16:48.12:0,48,804	1/1:3,6:9:19.68:163,20,0	1/1:1,13:14:35.95:333,36,0	0/0:14,0:14:38.99:0,39,546	0/0:25,0:26:76.73:0,77,1218	0/0:17,0:17:48.12:0,48,779	0/0:12,0:12:33.08:0,33,553	0/0:21,0:21:63.04:0,63,920	0/0:26,0:26:51.42:0,51,1119	0/0:17,0:17:44.17:0,44,718	0/0:11,0:11:32.95:0,33,400	0/0:21,0:21:54.05:0,54,646	0/0:9,0:9:21.46:0,21,241	0/0:17,0:17:48.11:0,48,740	0/0:13,0:13:39.02:0,39,589	0/0:5,0:5:15.01:0,15,209	0/0:9,0:9:27.07:0,27,449	0/0:23,0:23:63.91:0,64,988	0/0:17,0:17:30.06:0,30,370	0/0:13,0:13:36.56:0,37,604
chr10	31139206	.	T	TA	617.40	PASS	AB=0.890;AC=10;AF=0.179;AN=56;BaseQRankSum=-0.941;DP=502;FS=0.628;HRun=13;HaplotypeScore=69.5512;InbreedingCoeff=0.4468;MQ=76.69;MQ0=2;MQRankSum=-0.866;QD=5.72;ReadPosRankSum=-1.603;VQSLOD=1.9284;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:27:48.21:0,48,319	0/0:6,0:6:14.85:0,15,102	0/0:39,0:24:5.27:0,5,119	0/1:18,0:14:4.92:5,0,19	0/0:22,1:28:12.55:0,13,209	0/0:22,4:26:0.82:0,1,294	0/0:16,0:16:23.70:0,24,164	0/0:19,0:23:41.19:0,41,252	0/0:17,0:17:35.62:0,36,245	0/0:8,0:8:12.22:0,12,35	0/0:13,0:13:13.44:0,13,50	0/1:15,0:15:0.99:1,0,101	0/0:26,0:26:55.51:0,56,375	0/0:17,0:17:35.67:0,36,246	0/0:11,0:12:25.80:0,26,170	0/0:20,0:21:34.58:0,35,232	0/0:23,2:27:42.73:0,43,326	0/0:17,0:17:28.82:0,29,200	1/1:7,6:13:0.33:129,0,0	1/1:6,15:22:36.76:321,37,0	0/1:5,4:9:3.68:72,0,4	0/0:16,1:17:4.81:0,5,177	0/1:11,2:13:7.06:7,0,102	0/0:3,0:5:10.01:0,10,53	0/0:9,0:9:20.80:0,21,144	0/0:23,0:23:38.61:0,39,267	1/1:3,13:17:24.03:223,24,0	0/0:15,0:15:9.54:0,10,152
chr10	31139406	.	C	CTGTATA	1929.90	PASS	AB=0.958;AC=5;AF=0.089;AN=56;BaseQRankSum=4.915;DP=644;FS=2.971;HRun=0;HaplotypeScore=136.2840;InbreedingCoeff=0.7749;MQ=88.96;MQ0=0;MQRankSum=-6.447;QD=35.09;ReadPosRankSum=-1.653;VQSLOD=2.8207;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,108,2424	0/0:7,0:7:21.07:0,21,497	0/0:26,0:26:69.23:0,69,1521	0/0:27,0:26:68.52:0,69,1477	0/0:19,0:19:56.98:0,57,1261	0/0:23,0:23:57.20:0,57,1326	0/0:21,0:21:57.20:0,57,1302	0/0:26,0:26:66.20:0,66,1434	0/0:34,0:34:99:0,99,2244	1/1:5,10:16:39.13:1269,39,0	1/1:4,11:16:18.06:639,18,0	0/0:28,0:28:78.27:0,78,1800	0/0:22,0:22:63.22:0,63,1464	0/0:25,0:25:69.20:0,69,1508	0/0:31,0:31:87.25:0,87,1934	0/0:13,0:13:39.13:0,39,922	0/0:39,0:39:99:0,108,2459	0/0:20,0:20:57.19:0,57,1227	0/0:26,0:26:69.23:0,69,1554	0/0:21,0:21:57.20:0,57,1344	0/0:26,0:26:75.23:0,75,1558	0/0:13,0:13:39.13:0,39,853	0/0:18,0:18:54.19:0,54,1249	0/0:25,0:25:75.24:0,75,1703	0/0:15,0:15:39.13:0,39,921	0/1:22,1:23:99:150,0,1226	0/0:24,0:23:69.22:0,69,1560	0/0:22,0:22:63.22:0,63,1440
chr10	31140060	.	CCT	C	2425.63	PASS	AB=0.879;AC=5;AF=0.089;AN=56;BaseQRankSum=9.654;DP=730;FS=0.511;HRun=0;HaplotypeScore=87.5184;InbreedingCoeff=0.7768;MQ=76.81;MQ0=0;MQRankSum=-1.031;QD=29.58;ReadPosRankSum=-0.225;VQSLOD=4.8139;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:34:99:0,102,2059	0/0:12,0:12:36.12:0,36,731	0/0:13,0:13:24.06:0,24,392	0/0:16,0:16:35.99:0,36,487	0/0:27,0:27:81.28:0,81,1635	0/0:16,0:16:48.16:0,48,938	0/0:31,0:31:93.32:0,93,1857	0/0:25,0:25:72.25:0,72,1396	0/0:26,0:26:78.27:0,78,1585	1/1:0,34:34:99:1629,102,0	1/1:0,19:19:51.17:818,51,0	0/0:37,0:37:99:0,111,2206	0/0:28,0:28:84.29:0,84,1705	0/0:39,0:39:99:0,117,2342	0/0:52,0:52:99:0,157,3156	0/0:36,0:36:99:0,108,2175	0/0:30,0:30:90.28:0,90,1790	0/0:17,0:17:51.16:0,51,984	0/0:17,0:17:51.17:0,51,981	0/0:24,0:24:72.25:0,72,1449	0/0:32,0:32:96.33:0,96,1893	0/0:27,0:27:81.26:0,81,1589	0/0:15,0:15:42.14:0,42,830	0/0:21,0:21:63.22:0,63,1280	0/0:32,0:32:96.30:0,96,1822	0/1:25,4:29:99:108,0,1359	0/0:34,0:34:99:0,102,2048	0/0:6,0:6:18.06:0,18,364
chr10	31140608	.	A	AG	610.99	PASS	AB=0.810;AC=3;AF=0.054;AN=56;BaseQRankSum=9.409;DP=727;FS=17.733;HRun=0;HaplotypeScore=86.0410;InbreedingCoeff=0.6320;MQ=92.23;MQ0=0;MQRankSum=-8.669;QD=12.73;ReadPosRankSum=-0.417;VQSLOD=3.2674;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:88.18:0,88,1214	0/0:11,0:11:33.11:0,33,461	0/0:41,0:41:99:0,120,1584	0/0:23,0:23:53.38:0,53,826	0/0:18,0:18:54.18:0,54,751	0/0:31,0:31:90.29:0,90,1241	0/0:23,0:23:69.16:0,69,923	0/0:37,0:37:99:0,108,1462	0/0:19,0:19:57.16:0,57,760	1/1:13,18:31:15:565,15,0	0/1:13,4:17:29.30:148,0,29	0/0:31,0:31:90.25:0,90,1199	0/0:27,0:27:75.25:0,75,1041	0/0:31,0:31:93.29:0,93,1270	0/0:26,0:26:78.21:0,78,1035	0/0:22,0:22:66.22:0,66,922	0/0:25,0:25:66.22:0,66,920	0/0:22,0:22:66.19:0,66,890	0/0:16,0:16:48.16:0,48,671	0/0:33,0:33:99:0,99,1380	0/0:25,0:25:75.25:0,75,1047	0/0:22,0:22:66.21:0,66,904	0/0:28,0:28:81.21:0,81,1075	0/0:42,0:42:99:0,117,1616	0/0:22,0:22:66.22:0,66,922	0/0:27,0:27:81.26:0,81,1116	0/0:39,0:39:99:0,117,1592	0/0:7,0:7:21.07:0,21,294
chr10	31140609	.	C	CCTCAG	2504.49	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=10.305;DP=724;FS=28.535;HRun=0;HaplotypeScore=140.2547;InbreedingCoeff=0.9958;MQ=92.32;MQ0=0;MQRankSum=-9.174;QD=52.18;ReadPosRankSum=-1.702;VQSLOD=1.3447;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:90.26:0,90,1856	0/0:11,0:11:33.11:0,33,733	0/0:41,0:41:99:0,114,2255	0/0:23,0:23:21.84:0,22,1156	0/0:19,0:19:54.19:0,54,1169	0/0:32,0:32:90.30:0,90,1965	0/0:23,0:23:63.22:0,63,1404	0/0:38,0:38:99:0,105,2184	0/0:18,0:18:51.18:0,51,1104	1/1:14,18:32:64.77:1974,65,0	1/1:12,4:16:30.10:652,30,0	0/0:29,0:29:84.28:0,84,1814	0/0:27,0:27:81.24:0,81,1679	0/0:32,0:32:90.31:0,90,1926	0/0:24,0:24:72.22:0,72,1545	0/0:22,0:22:66.23:0,66,1446	0/0:25,0:25:69.22:0,69,1469	0/0:22,0:22:66.20:0,66,1339	0/0:16,0:16:48.16:0,48,1070	0/0:33,0:33:99:0,99,2163	0/0:25,0:25:75.26:0,75,1644	0/0:21,0:21:62.80:0,63,1347	0/0:27,0:27:78.25:0,78,1657	0/0:41,0:41:99:0,114,2521	0/0:22,0:22:66.23:0,66,1454	0/0:28,0:28:81.25:0,81,1672	0/0:38,0:38:99:0,114,2494	0/0:9,0:9:21.07:0,21,468
chr10	31140703	.	GT	G	1569.86	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.159;DP=697;FS=1.164;HRun=3;HaplotypeScore=67.3820;InbreedingCoeff=0.9989;MQ=93.19;MQ0=0;MQRankSum=-1.711;QD=31.40;ReadPosRankSum=-0.434;VQSLOD=3.4267;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,114,1605	0/0:15,0:15:45.15:0,45,648	0/0:40,0:40:99:0,117,1577	0/0:22,0:21:60.20:0,60,844	0/0:24,0:24:72.24:0,72,1037	0/0:27,0:27:81.27:0,81,1165	0/0:22,0:22:66.21:0,66,932	0/0:33,0:33:93.31:0,93,1324	0/0:26,0:26:75.25:0,75,1080	1/1:2,29:31:87.26:1066,87,0	1/1:1,18:19:51.16:625,51,0	0/0:18,0:18:51.17:0,51,734	0/0:30,0:30:90.29:0,90,1276	0/0:31,0:31:84.28:0,84,1204	0/0:30,0:30:90.29:0,90,1277	0/0:18,0:18:54.18:0,54,778	0/0:35,0:35:99:0,105,1512	0/0:17,0:17:48.16:0,48,691	0/0:27,0:27:78.25:0,78,1106	0/0:16,0:16:48.13:0,48,654	0/0:13,0:13:39.13:0,39,562	0/0:14,0:14:42.14:0,42,605	0/0:19,0:19:57.17:0,57,784	0/0:25,0:25:72.19:0,72,995	0/0:24,0:24:69.23:0,69,986	0/0:40,2:42:49:0,49,1611	0/0:32,0:32:96.30:0,96,1360	0/0:8,0:8:24.08:0,24,342
chr10	31142212	.	GAATA	G	2711.37	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=10.774;DP=704;FS=3.371;HRun=0;HaplotypeScore=114.8515;InbreedingCoeff=0.9978;MQ=83.00;MQ0=0;MQRankSum=-3.811;QD=53.16;ReadPosRankSum=-0.598;VQSLOD=4.6480;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:48.01:0,48,1187	0/0:7,0:7:21.07:0,21,547	0/0:25,0:25:75.26:0,75,2031	0/0:17,0:17:51.15:0,51,1210	0/0:36,0:36:99:0,108,2979	0/0:37,0:37:99:0,111,3140	0/0:15,0:15:45.13:0,45,1173	0/0:40,0:40:99:0,117,3153	0/0:30,0:30:90.31:0,90,2541	1/1:0,32:32:93.21:1706,93,0	1/1:0,19:19:57.11:1127,57,0	0/0:26,0:26:78.25:0,78,2139	0/0:24,0:24:72.20:0,72,1898	0/0:15,0:15:45.15:0,45,1210	0/0:31,0:31:93.32:0,93,2658	0/0:27,0:27:81.18:0,81,2046	0/0:30,0:30:90.25:0,90,2299	0/0:12,0:12:36.12:0,36,1000	0/0:22,0:22:66.22:0,66,1749	0/0:31,0:31:90.30:0,90,2473	0/0:32,0:32:96.31:0,96,2710	0/0:22,0:22:66.23:0,66,1864	0/0:38,0:38:99:0,111,3015	0/0:16,0:16:48.15:0,48,1269	0/0:20,0:20:60.19:0,60,1648	0/0:31,0:31:93.32:0,93,2563	0/0:39,0:37:99:0,117,3281	0/0:14,0:14:42.14:0,42,1162
chr10	31142929	.	T	TAAC	3869.90	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-3.921;DP=675;FS=5.609;HRun=0;HaplotypeScore=90.7736;InbreedingCoeff=0.9966;MQ=77.62;MQ0=0;MQRankSum=-2.106;QD=54.51;ReadPosRankSum=-0.287;VQSLOD=5.6655;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:87.28:0,87,1424	0/0:13,0:13:33.11:0,33,550	0/0:18,0:18:50.80:0,51,711	0/0:11,0:11:33.11:0,33,544	0/0:32,0:32:96.33:0,96,1591	0/0:30,0:30:87.26:0,87,1363	0/0:17,0:17:51.16:0,51,824	0/0:26,0:26:72.24:0,72,1173	0/0:17,0:17:51.16:0,51,823	1/1:4,28:32:84.29:1868,84,0	1/1:2,35:38:93.28:2002,93,0	0/0:20,0:20:57.19:0,57,950	0/0:21,0:21:63.22:0,63,1048	0/0:22,0:22:63.22:0,63,1041	0/0:26,0:26:72.22:0,72,1148	0/0:21,0:21:63.22:0,63,1050	0/0:24,0:24:69.24:0,69,1147	0/0:18,0:18:51.17:0,51,849	0/0:31,0:31:87.29:0,87,1425	0/0:36,0:36:99:0,102,1660	0/0:14,0:14:39.13:0,39,650	0/0:27,0:27:78.26:0,78,1276	0/0:28,0:28:78.25:0,78,1272	0/0:19,0:19:54.18:0,54,894	0/0:24,0:24:69.24:0,69,1148	0/0:28,1:29:19.27:0,19,1331	0/0:33,0:33:90.29:0,90,1474	0/0:16,0:16:48.13:0,48,749
chr10	31143731	.	TTTTG	T	2643.43	PASS	AB=0.926;AC=5;AF=0.089;AN=56;BaseQRankSum=10.081;DP=700;FS=20.771;HRun=0;HaplotypeScore=117.1983;InbreedingCoeff=0.7681;MQ=86.20;MQ0=0;MQRankSum=-2.855;QD=31.85;ReadPosRankSum=0.895;VQSLOD=2.1868;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:84.29:0,84,2073	0/0:15,0:15:42.14:0,42,1068	0/0:28,0:28:69.77:0,70,1709	0/0:38,0:37:90.72:0,91,1956	0/0:26,0:26:75.26:0,75,1869	0/0:29,0:29:81.28:0,81,2078	0/0:20,0:20:57.18:0,57,1407	0/0:42,0:42:99:0,105,2528	0/0:25,0:25:72.25:0,72,1848	1/1:1,29:30:13.22:1347,13,0	1/1:3,25:28:78.27:1380,78,0	0/0:28,0:28:81.26:0,81,2017	0/0:17,0:17:48.16:0,48,1203	0/0:25,0:25:69.24:0,69,1678	0/0:29,0:29:84.29:0,84,2156	0/0:22,0:22:66.23:0,66,1694	0/0:24,0:24:63.67:0,64,1555	0/0:14,0:14:42.14:0,42,1078	0/0:20,0:20:51.18:0,51,1308	0/0:24,0:24:69.24:0,69,1765	0/0:17,0:17:51.18:0,51,1280	0/0:35,0:35:93.31:0,93,2292	0/0:25,0:25:69.22:0,69,1717	0/0:20,0:20:48.16:0,48,1232	0/0:28,0:28:75.22:0,75,1777	0/1:23,2:25:42.90:43,0,1400	0/0:25,0:25:69.24:0,69,1740	0/0:10,0:10:27.09:0,27,691
chr10	31146525	.	C	CTT	2217.29	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.740;DP=681;FS=2.622;HRun=2;HaplotypeScore=85.7696;InbreedingCoeff=0.9976;MQ=75.60;MQ0=0;MQRankSum=-3.516;QD=46.19;ReadPosRankSum=-1.060;VQSLOD=3.3374;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:89.70:0,90,1256	0/0:7,0:7:21.07:0,21,309	0/0:35,0:32:92.46:0,92,1257	0/0:29,0:29:83.97:0,84,1016	0/0:29,0:29:81.24:0,81,1141	0/0:29,0:29:80.89:0,81,1068	0/0:29,0:29:78.10:0,78,1019	0/0:33,0:33:99:0,99,1230	0/0:13,0:13:36.11:0,36,510	1/1:0,24:25:72.15:1194,72,0	1/1:0,23:23:69.07:1145,69,0	0/0:34,0:34:96.31:0,96,1391	0/0:22,0:22:63.15:0,63,843	0/0:17,0:17:51.13:0,51,707	0/0:31,0:31:87.16:0,87,1134	0/0:21,0:21:63.19:0,63,888	0/0:24,0:24:72.10:0,72,928	0/0:19,0:19:57.09:0,57,733	0/0:24,0:24:72.19:0,72,1017	0/0:21,0:20:51.16:0,51,729	0/0:23,0:23:63.12:0,63,808	0/0:37,0:37:99:0,105,1481	0/0:20,0:20:57.18:0,57,818	0/0:26,0:26:72.08:0,72,967	0/0:13,0:13:33.10:0,33,466	0/0:25,0:25:70.55:0,71,932	0/0:27,0:27:75.18:0,75,1021	0/0:12,0:12:36.12:0,36,524
chr10	31146782	.	GT	G	1952.60	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=10.047;DP=620;FS=2.508;HRun=1;HaplotypeScore=60.9413;InbreedingCoeff=0.9699;MQ=75.08;MQ0=0;MQRankSum=-0.362;QD=36.16;ReadPosRankSum=1.508;VQSLOD=4.0141;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,105,1635	0/0:11,0:11:33.11:0,33,527	0/0:11,0:11:26.32:0,26,402	0/0:15,0:15:45.10:0,45,653	0/0:31,0:31:90.30:0,90,1414	0/0:22,0:22:66.20:0,66,1010	0/0:12,0:12:36.11:0,36,544	0/0:39,0:39:99:0,117,1805	0/0:12,0:12:36.12:0,36,575	1/1:0,29:29:81.27:1132,81,0	1/1:0,25:25:69.19:942,69,0	0/0:14,0:14:42.14:0,42,669	0/0:24,0:24:72.25:0,72,1145	0/0:22,0:22:66.22:0,66,1043	0/0:28,0:28:81.28:0,81,1290	0/0:35,0:35:99:0,105,1674	0/0:27,0:27:81.25:0,81,1266	0/0:17,0:17:48.16:0,48,760	0/0:31,0:31:93.26:0,93,1425	0/0:25,0:25:75.24:0,75,1169	0/0:15,0:15:45.15:0,45,717	0/0:22,0:22:63.18:0,63,932	0/0:16,0:16:48.16:0,48,766	0/0:26,0:26:78.27:0,78,1243	0/0:16,0:16:45.13:0,45,693	0/0:30,0:30:48.54:0,49,1305	0/0:26,0:26:72.25:0,72,1149	0/0:3,0:3:9.03:0,9,144
chr10	31146863	.	AT	A	1339.64	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=11.644;DP=573;FS=3.327;HRun=2;HaplotypeScore=73.9029;InbreedingCoeff=0.9949;MQ=79.86;MQ0=1;MQRankSum=-11.258;QD=23.92;ReadPosRankSum=1.409;VQSLOD=3.6045;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:87.29:0,87,1293	0/0:9,0:9:27.08:0,27,369	0/0:22,0:22:63.21:0,63,928	0/0:9,0:9:20.52:0,21,285	0/0:36,0:36:99:0,105,1564	0/0:14,0:14:39.13:0,39,583	0/0:18,0:18:54.18:0,54,804	0/0:34,0:34:99:0,99,1415	0/0:14,0:14:42.13:0,42,608	1/1:29,3:32:92.06:970,92,0	1/1:21,3:24:59.32:491,59,0	0/0:20,0:20:54.18:0,54,809	0/0:20,0:20:60.19:0,60,867	0/0:18,0:18:51.17:0,51,755	0/0:14,0:13:42.14:0,42,624	0/0:22,0:22:63.21:0,63,940	0/0:25,0:25:75.25:0,75,1119	0/0:20,0:20:60.20:0,60,893	0/0:24,0:24:69.23:0,69,1033	0/0:26,0:25:72.24:0,72,1074	0/0:8,0:8:24.08:0,24,355	0/0:25,0:25:75.25:0,75,1119	0/0:18,0:18:54.18:0,54,809	0/0:10,0:10:24.07:0,24,336	0/0:24,0:24:72.23:0,72,1060	0/0:21,0:21:63.21:0,63,940	0/0:22,0:22:66.22:0,66,979	0/0:13,0:13:39.13:0,39,584
chr10	31146864	.	T	TA	1647.17	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=11.631;DP=576;FS=3.327;HRun=1;HaplotypeScore=79.6458;InbreedingCoeff=0.9951;MQ=80.34;MQ0=1;MQRankSum=-11.151;QD=27.92;ReadPosRankSum=1.502;VQSLOD=3.5721;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:87.29:0,87,1212	0/0:9,0:9:27.08:0,27,354	0/0:23,0:23:63.21:0,63,866	0/0:9,0:9:20.76:0,21,269	0/0:35,0:35:99:0,105,1460	0/0:14,0:14:39.13:0,39,544	0/0:18,0:18:54.18:0,54,753	0/0:34,0:34:99:0,99,1329	0/0:14,0:14:42.12:0,42,568	1/1:8,25:33:93.08:1150,93,0	1/1:6,20:26:60.05:619,60,0	0/0:18,0:18:54.18:0,54,752	0/0:20,0:20:60.18:0,60,815	0/0:18,0:18:51.17:0,51,710	0/0:14,0:13:42.14:0,42,585	0/0:23,0:23:63.21:0,63,879	0/0:25,0:25:75.25:0,75,1046	0/0:20,0:20:60.20:0,60,834	0/0:23,0:23:69.23:0,69,965	0/0:26,0:25:72.24:0,72,1005	0/0:8,0:8:24.08:0,24,332	0/0:26,0:26:75.25:0,75,1045	0/0:19,0:19:54.18:0,54,753	0/0:10,0:10:24.07:0,24,316	0/0:24,0:24:72.23:0,72,991	0/0:21,0:21:63.21:0,63,878	0/0:22,0:22:66.22:0,66,919	0/0:13,0:13:39.13:0,39,545
chr10	31146867	.	TA	T	1012.67	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=11.376;DP=576;FS=3.395;HRun=1;HaplotypeScore=76.2144;InbreedingCoeff=0.9931;MQ=80.98;MQ0=1;MQRankSum=-11.113;QD=17.46;ReadPosRankSum=2.228;VQSLOD=4.1732;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:90.26:0,90,1386	0/0:7,0:7:21.06:0,21,313	0/0:25,0:25:75.25:0,75,1173	0/0:8,0:8:21.06:0,21,314	0/0:36,0:36:99:0,108,1694	0/0:14,0:14:39.13:0,39,623	0/0:18,0:18:51.17:0,51,815	0/0:33,0:33:99:0,99,1539	0/0:13,0:13:39.13:0,39,621	1/1:7,25:32:70.97:734,71,0	1/1:6,20:26:58.21:400,58,0	0/0:18,0:18:54.18:0,54,855	0/0:19,0:19:57.18:0,57,887	0/0:18,0:18:51.14:0,51,768	0/0:14,0:13:42.13:0,42,648	0/0:23,0:23:69.21:0,69,1078	0/0:27,0:27:81.25:0,81,1269	0/0:20,0:20:57.19:0,57,908	0/0:25,0:25:75.26:0,75,1198	0/0:26,0:25:72.23:0,72,1127	0/0:7,0:7:21.07:0,21,332	0/0:25,0:25:75.26:0,75,1197	0/0:19,0:19:57.19:0,57,908	0/0:10,0:10:27.05:0,27,389	0/0:24,0:24:72.25:0,72,1151	0/0:25,0:25:75.23:0,75,1134	0/0:20,0:20:60.20:0,60,958	0/0:13,0:13:39.13:0,39,623
chr10	31146870	.	A	ATTT	2307.24	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=11.396;DP=574;FS=1.771;HRun=1;HaplotypeScore=103.0772;InbreedingCoeff=0.9885;MQ=82.85;MQ0=1;MQRankSum=-11.573;QD=40.48;ReadPosRankSum=1.215;VQSLOD=2.8610;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:90.25:0,90,1598	0/0:6,0:6:18.06:0,18,336	0/0:27,0:27:81.24:0,81,1363	0/0:9,0:9:23.83:0,24,399	0/0:33,0:33:96.33:0,96,1737	0/0:15,0:15:42.13:0,42,746	0/0:18,0:18:51.02:0,51,951	0/0:33,0:33:99:0,99,1708	0/0:14,0:14:36.12:0,36,656	1/1:28,3:31:90.09:1476,90,0	1/1:25,1:26:69.14:953,69,0	0/0:16,0:16:48.16:0,48,895	0/0:19,0:19:57.14:0,57,996	0/0:16,0:16:45.15:0,45,834	0/0:13,0:12:39.13:0,39,727	0/0:23,0:23:69.24:0,69,1262	0/0:27,0:27:81.28:0,81,1498	0/0:19,0:19:57.15:0,57,1017	0/0:26,0:26:78.26:0,78,1404	0/0:28,0:27:68.92:0,69,1278	0/0:6,0:6:18.06:0,18,335	0/0:24,0:24:72.25:0,72,1333	0/0:20,0:20:57.18:0,57,1015	0/0:8,0:8:21.07:0,21,388	0/0:24,0:24:72.25:0,72,1336	0/0:26,0:26:72.23:0,72,1294	0/0:21,0:21:60.20:0,60,1109	0/0:13,0:13:39.13:0,39,727
chr10	31146924	.	G	GTTT	2394.42	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=7.878;DP=576;FS=2.254;HRun=10;HaplotypeScore=112.2256;InbreedingCoeff=0.8018;MQ=63.42;MQ0=6;MQRankSum=-6.439;QD=17.61;ReadPosRankSum=-2.126;VQSLOD=1.5016;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:37:95.98:0,96,1109	0/0:7,0:7:18.05:0,18,219	0/1:15,0:8:0.29:0,0,76	0/0:22,0:8:8.82:0,9,107	0/0:24,0:27:61.31:0,61,722	0/0:15,0:19:38.75:0,39,462	0/0:22,0:22:47.84:0,48,583	0/0:30,0:29:57.10:0,57,673	0/0:17,0:16:24.20:0,24,376	0/1:14,0:14:0:0,0,0	0/1:15,0:15:0:0,0,0	0/0:11,0:11:24.01:0,24,287	0/0:19,0:20:45:0,45,515	0/0:16,0:16:36.05:0,36,423	0/0:25,0:26:64.08:0,64,759	0/0:24,0:24:53.73:0,54,613	0/0:30,0:31:63.03:0,63,746	0/0:17,0:17:35.76:0,36,436	1/1:20,4:25:57.02:723,57,0	1/1:21,8:30:74.34:991,74,0	1/1:4,3:3:2.97:20,3,0	0/0:22,0:22:57.12:0,57,677	0/0:16,0:16:29.99:0,30,364	0/0:12,0:11:25.42:0,25,318	0/0:26,0:26:51:0,51,619	0/0:23,0:22:28.27:0,28,560	1/1:20,5:27:57.42:808,57,0	0/0:13,0:13:23.97:0,24,292
chr10	31146948	.	T	TTG	1997.98	PASS	AB=1.000;AC=9;AF=0.173;AN=52;BaseQRankSum=4.641;DP=578;FS=2.530;HRun=0;HaplotypeScore=86.1515;InbreedingCoeff=0.8727;MQ=60.44;MQ0=30;MQRankSum=-7.619;QD=17.68;ReadPosRankSum=0.752;VQSLOD=3.6511;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,108,1490	0/0:10,0:10:30.09:0,30,438	0/0:20,0:5:11.11:0,11,99	0/1:38,0:9:2.03:2,0,53	0/0:30,0:29:78.24:0,78,1137	0/0:17,0:17:48.13:0,48,673	0/0:27,0:26:71.78:0,72,956	0/0:32,0:31:87.02:0,87,1259	0/0:18,0:17:50.32:0,50,662	./.	./.	0/0:12,0:11:33.05:0,33,438	0/0:20,0:20:53.72:0,54,670	0/0:16,0:15:35.60:0,36,444	0/0:26,0:25:65.80:0,66,949	0/0:22,0:21:63.17:0,63,866	0/0:30,0:28:75.22:0,75,1081	0/0:26,0:24:59.85:0,60,859	1/1:10,15:22:40.35:708,40,0	1/1:4,15:18:54.17:851,54,0	1/1:6,3:4:6:79,6,0	0/0:23,0:22:63.21:0,63,944	0/0:16,0:15:45.15:0,45,685	0/0:21,0:18:42.99:0,43,580	0/0:20,0:20:59.77:0,60,844	0/0:23,0:20:57.15:0,57,673	1/1:9,13:22:19.79:509,20,0	0/0:8,0:8:24.04:0,24,304
chr10	31148761	.	T	TGTGTGTGTGC	1322.96	PASS	AB=0.971;AC=3;AF=0.056;AN=54;BaseQRankSum=1.691;DP=668;FS=1.693;HRun=0;HaplotypeScore=208.4442;InbreedingCoeff=0.6283;MQ=67.07;MQ0=1;MQRankSum=-0.873;QD=24.50;ReadPosRankSum=-4.281;VQSLOD=2.2522;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,144,4343	0/0:6,0:6:15.05:0,15,424	0/0:23,0:16:20.29:0,20,437	0/0:20,0:12:14.48:0,14,109	0/0:21,0:21:54.16:0,54,1435	0/0:19,0:19:57.18:0,57,1426	0/0:38,0:38:47.44:0,47,2276	0/0:23,0:23:60.07:0,60,1309	0/0:17,0:17:48.16:0,48,1401	1/1:4,12:21:51.56:1364,52,0	./.	0/0:31,0:31:75.21:0,75,2057	0/0:23,0:23:57.20:0,57,1733	0/0:33,0:33:87.30:0,87,2436	0/0:30,0:30:81.21:0,81,2153	0/0:12,0:12:33.11:0,33,985	0/0:30,0:30:84.21:0,84,2412	0/0:36,0:36:81.18:0,81,2445	0/0:12,0:11:24.01:0,24,432	0/0:15,0:15:36.09:0,36,812	0/0:37,0:37:66.28:0,66,1823	0/0:24,0:24:63.16:0,63,1702	0/0:19,0:19:57.18:0,57,1584	0/0:38,0:38:99:0,105,2895	0/0:16,0:16:48.15:0,48,1282	0/1:32,1:33:64.40:64,0,2636	0/0:16,0:16:43.32:0,43,1041	0/0:12,0:12:33.11:0,33,997
chr10	31149229	.	G	GT	1427.88	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=1.804;DP=699;FS=4.366;HRun=6;HaplotypeScore=76.4234;InbreedingCoeff=0.7801;MQ=70.68;MQ0=1;MQRankSum=1.251;QD=19.30;ReadPosRankSum=0.633;VQSLOD=3.2768;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:93.18:0,93,939	0/0:12,0:12:33.05:0,33,325	0/0:28,0:23:50.98:0,51,469	0/1:23,0:19:28.76:29,0,210	0/0:29,0:29:84.15:0,84,846	0/0:23,0:23:57.10:0,57,574	0/0:29,0:29:75.15:0,75,758	0/0:34,0:34:90.01:0,90,898	0/0:23,0:23:63.09:0,63,621	1/1:3,26:29:72.22:894,72,0	1/1:3,19:22:51.16:635,51,0	0/0:21,0:21:57.10:0,57,568	0/0:26,0:26:69.14:0,69,698	0/0:25,0:25:63.10:0,63,633	0/0:18,0:18:36.07:0,36,367	0/0:21,0:21:60.10:0,60,597	0/0:30,0:30:84.19:0,84,857	0/0:24,0:24:63.14:0,63,642	0/0:31,0:31:78.15:0,78,781	0/0:21,0:21:57.13:0,57,581	0/0:33,0:33:99:0,99,975	0/0:25,0:25:57.10:0,57,574	0/0:17,0:17:48.10:0,48,485	0/0:36,0:36:93.12:0,93,928	0/0:19,0:19:48.11:0,48,490	0/0:29,1:30:40.42:0,40,718	0/0:26,0:26:72.13:0,72,719	0/0:10,0:10:27.06:0,27,275
chr10	31149523	.	CTA	C	2343.06	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=11.093;DP=721;FS=6.862;HRun=0;HaplotypeScore=84.3360;InbreedingCoeff=0.9969;MQ=88.38;MQ0=0;MQRankSum=-4.823;QD=41.84;ReadPosRankSum=0.241;VQSLOD=5.2615;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:84.27:0,84,1586	0/0:9,0:9:27.09:0,27,521	0/0:26,0:26:72.23:0,72,1342	0/0:26,0:26:69.23:0,69,1202	0/0:39,0:39:99:0,117,2182	0/0:28,0:28:81.27:0,81,1532	0/0:22,0:22:60.21:0,60,1158	0/0:30,0:30:84.29:0,84,1602	0/0:21,0:21:63.20:0,63,1183	1/1:1,32:33:99:1489,99,0	1/1:1,22:23:66.22:976,66,0	0/0:26,0:26:78.25:0,78,1472	0/0:22,0:22:66.21:0,66,1215	0/0:29,0:29:87.30:0,87,1653	0/0:29,0:29:81.25:0,81,1482	0/0:24,0:24:66.21:0,66,1216	0/0:46,0:46:99:0,132,2478	0/0:29,0:29:84.27:0,84,1570	0/0:21,0:21:57.16:0,57,955	0/0:9,0:9:27.09:0,27,521	0/0:34,0:34:96.33:0,96,1820	0/0:27,0:27:81.28:0,81,1554	0/0:24,0:24:72.23:0,72,1356	0/0:33,0:33:99:0,99,1901	0/0:23,0:23:69.22:0,69,1283	0/0:24,0:24:72.22:0,72,1293	0/0:28,0:28:84.29:0,84,1593	0/0:8,0:8:21.07:0,21,405
chr10	31149573	.	A	AT	1865.40	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-0.137;DP=782;FS=0.000;HRun=4;HaplotypeScore=79.6199;InbreedingCoeff=0.9841;MQ=85.87;MQ0=0;MQRankSum=-3.683;QD=32.73;ReadPosRankSum=0.792;VQSLOD=4.0353;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:96.25:0,96,1078	0/0:10,0:10:30.09:0,30,340	0/0:28,0:28:72.18:0,72,804	0/0:33,0:32:55.36:0,55,686	0/0:39,0:39:99:0,108,1215	0/0:30,0:30:87.23:0,87,977	0/0:28,0:28:71.90:0,72,773	0/0:32,0:32:87.24:0,87,979	0/0:30,0:30:81.21:0,81,908	1/1:1,29:30:84.28:1147,84,0	1/1:5,22:27:63.17:840,63,0	0/0:33,0:33:93.26:0,93,1054	0/0:20,0:20:57.16:0,57,646	0/0:22,0:22:60.16:0,60,670	0/0:30,0:30:81.21:0,81,908	0/0:28,0:28:81.21:0,81,909	0/0:40,0:40:99:0,108,1190	0/0:32,0:32:84.22:0,84,942	0/0:20,0:20:57.16:0,57,646	0/0:17,0:17:48.14:0,48,544	0/0:28,0:28:84.24:0,84,953	0/0:30,0:30:81.23:0,81,918	0/0:31,0:31:93.23:0,93,1041	0/0:33,0:33:96.27:0,96,1088	0/0:33,0:33:84.24:0,84,952	0/0:35,0:35:93.26:0,93,1055	0/0:23,0:23:66.19:0,66,748	0/0:4,0:4:12.03:0,12,136
chr10	31149860	.	G	GAA	1667.08	PASS	AB=0.946;AC=6;AF=0.107;AN=56;BaseQRankSum=-3.990;DP=766;FS=1.142;HRun=9;HaplotypeScore=95.6812;InbreedingCoeff=0.6156;MQ=82.48;MQ0=0;MQRankSum=-2.293;QD=16.19;ReadPosRankSum=-3.001;VQSLOD=1.5854;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:59:99:0,150,1567	0/0:14,0:14:33.06:0,33,351	0/0:32,0:32:45.56:0,46,487	0/0:18,0:18:35.89:0,36,339	0/0:34,0:34:78.15:0,78,830	0/0:20,0:20:51.11:0,51,535	0/0:27,0:27:72.16:0,72,765	0/0:30,0:31:77.90:0,78,805	0/0:25,0:26:62.84:0,63,651	1/1:3,26:29:72.23:1083,72,0	1/1:3,13:18:47.60:650,48,0	0/0:34,0:34:88.48:0,88,955	0/0:33,0:33:84.18:0,84,894	0/0:23,0:25:56.65:0,57,633	0/1:23,0:23:12.84:13,0,486	0/0:28,0:29:80.92:0,81,834	0/0:36,0:36:99:0,102,1072	0/0:25,0:27:68.60:0,69,682	0/0:18,0:18:48.10:0,48,511	0/0:18,0:18:8.74:0,9,411	0/0:29,0:30:81.15:0,81,909	0/0:39,0:39:99:0,99,1038	0/0:25,0:25:63.12:0,63,663	0/0:32,0:33:83.92:0,84,874	0/0:19,0:19:54.13:0,54,575	0/1:29,3:33:57.41:57,0,740	0/0:29,0:29:75.18:0,75,798	0/0:7,0:7:18.04:0,18,192
chr10	31151136	.	AAC	A	1824.65	PASS	AB=1.000;AC=48;AF=0.923;AN=52;BaseQRankSum=-0.252;DP=417;FS=0.000;HRun=0;HaplotypeScore=79.8071;InbreedingCoeff=0.1590;MQ=68.38;MQ0=8;MQRankSum=0.199;QD=5.15;ReadPosRankSum=0.861;VQSLOD=2.6456;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:24,1:24:23.82:177,24,0	1/1:4,0:4:6.44:44,6,0	./.	0/0:27,0:20:0:0,0,0	1/1:16,0:16:2.16:116,2,0	1/1:16,1:17:14.87:110,15,0	1/1:25,0:24:11.95:91,12,0	0/1:16,0:16:0:0,0,0	1/1:10,0:10:20.92:162,21,0	1/1:14,0:17:8.63:44,9,0	1/1:14,0:16:11.19:78,11,0	1/1:12,0:12:11.95:91,12,0	1/1:15,0:15:11.88:85,12,0	1/1:9,0:9:2.99:23,3,0	1/1:18,0:18:13.13:90,13,0	1/1:7,0:7:5.98:46,6,0	1/1:18,1:17:11.85:82,12,0	1/1:11,0:10:17.89:134,18,0	1/1:11,0:11:5.96:46,6,0	1/1:11,0:11:5.96:45,6,0	0/1:14,0:13:14.64:15,0,16	1/1:13,0:13:8.97:69,9,0	./.	1/1:14,5:18:5.81:31,6,0	1/1:12,0:12:11.01:75,11,0	1/1:21,0:20:11.35:81,11,0	1/1:12,0:12:11.90:86,12,0	1/1:4,0:4:11.95:91,12,0
chr10	31153511	.	ATTAAG	A	6528.41	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=14.212;DP=622;FS=1.253;HRun=0;HaplotypeScore=120.5977;InbreedingCoeff=0.9970;MQ=65.68;MQ0=0;MQRankSum=-7.894;QD=47.65;ReadPosRankSum=-1.036;VQSLOD=4.6638;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,123,3624	0/0:14,0:14:42.14:0,42,1259	0/0:13,0:12:32.27:0,32,671	0/0:10,0:9:19.31:0,19,535	0/0:30,0:30:84.29:0,84,2489	0/0:18,0:18:51.17:0,51,1448	0/0:23,0:23:66.23:0,66,1966	0/0:32,0:32:84.28:0,84,2457	0/0:21,0:21:60.21:0,60,1810	1/1:2,20:22:63.16:1203,63,0	1/1:1,28:29:72.16:1325,72,0	0/0:24,0:24:60.19:0,60,1720	0/0:28,0:28:81.28:0,81,2410	0/0:23,0:23:69.22:0,69,2029	0/0:22,0:22:63.22:0,63,1813	0/0:19,0:18:48.16:0,48,1454	0/0:25,0:25:63.21:0,63,1769	0/0:17,0:17:51.18:0,51,1477	1/1:1,27:28:81.26:1571,81,0	1/1:3,20:23:57.13:1096,57,0	1/1:2,8:10:18.06:342,18,0	0/0:21,0:21:63.22:0,63,1902	0/0:22,0:22:63.22:0,63,1885	0/0:23,0:23:60.21:0,60,1748	0/0:22,0:22:66.23:0,66,1996	0/0:21,0:21:57.19:0,57,1553	1/1:2,23:25:48.16:992,48,0	0/0:12,0:12:36.04:0,36,886
chr10	31154447	.	AATT	A	2109.76	PASS	AB=0.931;AC=5;AF=0.089;AN=56;BaseQRankSum=9.321;DP=503;FS=2.785;HRun=0;HaplotypeScore=70.6626;InbreedingCoeff=0.7681;MQ=69.89;MQ0=0;MQRankSum=-2.464;QD=27.40;ReadPosRankSum=1.583;VQSLOD=3.8002;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:51.15:0,51,1124	0/0:10,0:10:30.10:0,30,699	0/0:11,0:11:28.12:0,28,517	0/0:7,0:7:18.06:0,18,379	0/0:26,0:25:75.26:0,75,1704	0/0:17,0:17:51.18:0,51,1178	0/0:18,0:18:51.17:0,51,1189	0/0:40,0:40:99:0,111,2542	0/0:11,0:11:33.11:0,33,755	1/1:2,27:29:75.26:1321,75,0	1/1:2,19:21:51.17:895,51,0	0/0:11,0:11:33.11:0,33,759	0/0:13,0:13:39.13:0,39,910	0/0:11,0:11:33.11:0,33,756	0/0:25,0:25:72.25:0,72,1664	0/0:8,0:8:24.08:0,24,549	0/0:19,0:19:57.20:0,57,1289	0/0:14,0:14:39.13:0,39,884	0/0:19,0:19:57.20:0,57,1307	0/0:30,0:30:90.31:0,90,2079	0/0:6,0:6:18.06:0,18,420	0/0:5,0:5:15.05:0,15,337	0/0:24,0:24:72.25:0,72,1657	0/0:8,0:8:24.08:0,24,560	0/0:32,0:32:93.27:0,93,2006	0/1:25,2:27:23.76:24,0,1580	0/0:27,0:27:75.22:0,75,1654	0/0:17,0:17:51.18:0,51,1167
chr10	31154973	.	G	GCACACA	411.84	PASS	AB=0.938;AC=13;AF=0.241;AN=54;BaseQRankSum=1.328;DP=385;FS=3.055;HRun=0;HaplotypeScore=92.9985;InbreedingCoeff=0.4927;MQ=65.74;MQ0=4;MQRankSum=-4.393;QD=4.34;ReadPosRankSum=-3.845;VQSLOD=0.9386;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:26:54.15:0,54,962	./.	0/0:21,0:13:6.02:0,6,79	0/0:41,0:27:3.29:0,3,53	0/0:15,0:14:27.09:0,27,528	0/0:18,0:20:45.15:0,45,847	0/0:15,0:14:15.03:0,15,259	0/1:17,0:17:35.45:35,0,359	0/0:10,0:9:21.04:0,21,372	1/1:12,0:11:6.02:157,6,0	0/1:10,0:12:0:0,0,0	0/0:9,0:9:9.03:0,9,165	0/0:7,0:7:9.03:0,9,171	0/0:12,0:13:21.07:0,21,401	0/0:17,0:17:20.97:0,21,239	0/0:11,0:12:15.05:0,15,269	0/0:15,0:15:24.06:0,24,457	0/1:16,0:16:21.30:21,0,543	1/1:11,1:12:5.81:104,6,0	1/1:5,0:6:3.01:87,3,0	1/1:11,1:12:5.72:63,6,0	0/0:9,0:9:15.05:0,15,303	0/0:4,0:4:6:0,6,86	0/0:21,0:21:21.47:0,21,317	0/0:11,0:11:15.52:0,16,299	0/0:18,0:16:30.01:0,30,502	1/1:3,4:7:3.01:89,3,0	0/0:2,0:2:3.01:0,3,62
chr10	31155034	.	GAC	G	731.63	PASS	AB=0.919;AC=15;AF=0.268;AN=56;BaseQRankSum=3.678;DP=375;FS=53.362;HRun=0;HaplotypeScore=57.8111;InbreedingCoeff=-0.0621;MQ=43.93;MQ0=24;MQRankSum=-1.893;QD=4.49;ReadPosRankSum=-1.749;VQSLOD=0.0398;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:38.44:0,38,671	0/0:1,0:1:3.01:0,3,39	0/0:35,0:4:5.95:0,6,106	0/0:30,0:9:6.39:0,6,180	0/0:15,0:13:15.03:0,15,217	0/1:16,0:15:45:45,0,258	0/0:16,0:13:14.22:0,14,270	0/0:12,0:12:22.17:0,22,286	0/1:14,1:13:17.54:18,0,237	0/1:7,7:12:10.62:223,0,11	0/0:6,4:9:6.10:0,6,33	0/0:11,0:11:14.85:0,15,174	0/1:8,0:8:1.32:1,0,55	0/0:10,0:7:15.04:0,15,221	0/1:11,0:9:10.49:10,0,80	0/1:9,0:7:14.58:15,0,149	0/1:15,1:15:31.08:31,0,307	0/0:11,0:11:22.93:0,23,248	1/1:4,11:14:15.57:303,16,0	0/1:11,4:14:20.45:59,0,20	0/1:13,3:13:11.02:48,0,11	0/0:6,0:5:8.92:0,9,129	0/0:13,0:13:16.16:0,16,330	0/0:18,0:16:7.38:0,7,257	0/1:10,0:10:13.01:13,0,279	0/1:14,1:9:56.51:57,0,335	1/1:3,0:2:5.97:63,6,0	0/0:2,0:2:2.99:0,3,24
chr10	31155038	.	GAC	G	766.44	PASS	AB=0.964;AC=22;AF=0.393;AN=56;BaseQRankSum=5.836;DP=372;FS=38.054;HRun=0;HaplotypeScore=59.0905;InbreedingCoeff=-0.3119;MQ=44.38;MQ0=24;MQRankSum=-0.723;QD=3.15;ReadPosRankSum=1.684;VQSLOD=0.4804;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:24,1:25:52.51:53,0,155	0/0:1,0:1:2.96:0,3,19	0/0:32,0:4:5.85:0,6,41	0/0:29,0:9:11.81:0,12,129	0/0:17,0:15:5.27:0,5,72	0/1:17,0:16:75.87:86,0,76	0/1:14,0:11:30.60:31,0,40	0/0:11,0:12:23.40:0,23,169	0/1:11,1:12:33.98:34,0,74	1/1:13,0:11:0.21:102,0,0	0/1:9,0:9:1.86:2,0,15	0/1:11,0:11:19.17:19,0,42	0/1:3,4:7:16.50:54,0,17	0/0:10,0:7:9.91:0,10,70	0/1:10,0:9:9.77:67,0,10	0/1:8,1:7:41.46:41,0,51	0/1:15,0:14:78.53:79,0,81	0/1:11,0:11:35.27:38,0,35	1/1:16,0:15:2.99:119,3,0	0/1:15,0:14:18.14:33,0,18	0/1:18,0:14:3.39:22,0,3	0/0:4,1:4:5.99:0,6,50	0/0:13,0:13:15.26:0,15,145	0/1:20,0:18:41:41,0,64	0/0:10,0:10:17.05:0,17,129	0/1:14,0:9:64.22:64,0,123	0/1:4,0:3:27.26:27,0,36	1/1:3,0:3:1.77:8,2,0
chr10	31155040	.	CAG	C	1142.91	PASS	AB=0.922;AC=35;AF=0.761;AN=46;BaseQRankSum=-1.771;DP=370;FS=0.000;HRun=0;HaplotypeScore=58.8695;InbreedingCoeff=0.1025;MQ=44.12;MQ0=24;MQRankSum=1.272;QD=4.57;ReadPosRankSum=3.925;VQSLOD=1.5210;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:16,8:24:53.92:137,0,54	./.	./.	./.	1/1:11,5:15:3.01:33,3,0	1/1:15,0:15:13.67:97,14,0	1/1:9,5:11:14.87:144,15,0	./.	1/1:9,3:12:5.77:46,6,0	0/0:13,0:11:0.37:0,0,101	0/0:10,0:10:8.13:0,8,67	1/1:6,5:11:6.02:65,6,0	1/1:5,1:7:8.86:79,9,0	1/1:10,0:7:2.57:21,3,0	1/1:8,2:9:7.09:92,7,0	1/1:10,0:8:5.66:41,6,0	1/1:11,2:13:17.91:180,18,0	1/1:7,3:10:6.02:66,6,0	0/1:17,0:16:16.07:16,0,48	0/1:13,1:13:9.94:10,0,15	0/0:19,0:15:2.27:0,2,19	./.	0/1:12,0:13:22.91:27,0,23	1/1:13,8:19:8.44:97,8,0	1/1:10,0:10:4.40:18,4,0	1/1:13,0:8:8.94:68,9,0	0/1:4,0:3:6.34:6,0,37	1/1:2,1:3:2.29:32,2,0
chr10	31156515	.	CATTCATTTCTTATGGGTAG	C	7182.11	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=10.907;DP=614;FS=2.721;HRun=0;HaplotypeScore=301.7364;InbreedingCoeff=0.9578;MQ=88.66;MQ0=0;MQRankSum=-10.580;QD=93.27;ReadPosRankSum=3.061;VQSLOD=4.1655;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:32:87.20:0,87,5871	0/0:7,0:7:21.07:0,21,1935	0/0:22,0:22:60.19:0,60,4017	0/0:25,0:25:66.22:0,66,4033	0/0:22,0:22:63.22:0,63,4922	0/0:25,0:25:75.23:0,75,5460	0/0:17,0:17:48.14:0,48,3822	0/0:45,0:45:99:0,123,9309	0/0:16,0:16:48.13:0,48,3627	0/0:19,0:19:57.20:0,57,4679	0/0:22,0:22:66.21:0,66,5551	0/0:29,0:29:87.30:0,87,7265	0/0:16,0:16:48.16:0,48,3939	0/0:22,0:22:63.22:0,63,5046	0/0:32,0:31:93.29:0,93,7504	0/0:26,0:26:75.24:0,75,6148	0/0:20,0:20:60.16:0,60,4388	0/0:16,0:16:48.15:0,48,4071	1/1:8,5:13:12.03:517,12,0	1/1:3,25:28:72.25:3902,72,0	1/1:3,7:10:5.64:322,6,0	0/0:23,0:23:69.24:0,69,6047	0/0:20,0:20:60.21:0,60,5202	0/0:20,0:20:60.14:0,60,4533	0/0:18,0:18:54.17:0,54,4615	0/0:30,0:30:90.31:0,90,7553	1/1:5,21:26:45.15:2441,45,0	0/0:12,0:12:36.12:0,36,2911
chr10	31157817	.	C	CCA	713.15	PASS	AB=1.000;AC=20;AF=0.357;AN=56;BaseQRankSum=2.366;DP=374;FS=2.065;HRun=0;HaplotypeScore=82.2765;InbreedingCoeff=0.0157;MQ=81.59;MQ0=3;MQRankSum=-0.064;QD=3.02;ReadPosRankSum=-5.468;VQSLOD=0.2868;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:3.97:0,4,179	0/0:10,0:8:14.68:0,15,96	0/0:23,0:21:44.83:0,45,437	0/0:18,0:17:32.63:0,33,319	0/1:8,0:8:5.38:5,0,77	0/0:7,0:7:10.37:0,10,80	0/0:11,0:11:22.97:0,23,175	0/1:23,0:23:29.35:29,0,184	0/0:9,0:9:18:0,18,182	0/1:19,0:20:15.61:16,0,209	0/1:21,0:20:7.69:8,0,93	0/1:11,0:11:6.76:7,0,132	0/1:9,0:9:15.16:15,0,40	0/1:8,0:9:16.37:24,0,16	0/0:15,0:15:26.96:0,27,334	0/1:8,0:8:18.83:19,0,25	0/1:15,0:15:52.14:75,0,52	0/0:7,0:7:5.96:0,6,46	1/1:4,0:11:23.03:219,23,0	1/1:3,10:14:26.75:186,27,0	1/1:5,1:26:6.32:35,6,0	0/0:5,0:5:8.37:0,8,68	0/1:14,0:13:68.93:69,0,111	0/1:13,0:14:26.12:26,0,99	0/1:15,0:15:35.87:79,0,36	0/0:8,0:9:14.91:0,15,127	1/1:2,13:18:5.99:75,6,0	0/0:8,0:8:10.43:0,10,88
chr10	31158366	.	CTGGGAGG	C	3020.47	PASS	AB=1.000;AC=27;AF=0.844;AN=32;BaseQRankSum=-2.164;DP=162;FS=7.608;HRun=0;HaplotypeScore=40.3385;InbreedingCoeff=0.5518;MQ=77.70;MQ0=13;MQRankSum=-2.543;QD=51.19;ReadPosRankSum=2.282;VQSLOD=2.3215;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,6:3:6.02:157,6,0	./.	0/0:51,0:18:37.45:0,37,703	0/0:39,0:15:5.51:0,6,520	./.	./.	./.	1/1:0,6:6:15.01:335,15,0	1/1:0,3:3:6.02:154,6,0	1/1:0,2:3:9.03:238,9,0	1/1:0,4:8:15.05:398,15,0	./.	./.	1/1:0,2:2:3.01:81,3,0	./.	./.	./.	./.	1/1:0,0:6:18.06:451,18,0	1/1:0,0:5:15.05:323,15,0	1/1:0,0:4:9.03:221,9,0	./.	1/1:1,2:3:3.01:82,3,0	./.	0/1:1,0:1:0:0,0,0	1/1:0,4:4:12.04:326,12,0	1/1:0,0:2:6.02:143,6,0	1/1:0,3:4:9.03:220,9,0
chr10	31158515	.	C	CT	208.80	PASS	AC=4;AF=0.077;AN=52;BaseQRankSum=2.506;DP=301;FS=5.520;HRun=4;HaplotypeScore=46.8228;InbreedingCoeff=0.7803;MQ=59.63;MQ0=2;MQRankSum=-2.159;QD=16.06;ReadPosRankSum=-2.111;VQSLOD=2.2243;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:63.19:0,63,746	0/0:1,0:1:3.01:0,3,36	0/0:4,0:2:6.02:0,6,72	0/0:7,0:7:15.01:0,15,156	0/0:15,0:15:37:0,37,433	0/0:11,0:10:30.07:0,30,346	0/0:22,0:22:45.12:0,45,523	0/0:19,0:18:45.14:0,45,537	0/0:10,0:9:18.05:0,18,216	0/0:12,0:12:33.09:0,33,385	0/0:10,0:10:17.94:0,18,181	0/0:13,0:13:24.07:0,24,288	0/0:7,0:7:12.04:0,12,143	0/0:8,0:8:23.56:0,24,257	0/0:11,0:11:30.09:0,30,360	0/0:13,0:13:30.09:0,30,357	0/0:17,0:17:36.11:0,36,431	0/0:15,0:15:39.12:0,39,468	1/1:1,5:6:15.05:201,15,0	1/1:3,4:5:9.03:117,9,0	./.	0/0:12,0:12:33.09:0,33,387	0/0:12,0:12:36.11:0,36,429	0/0:12,0:12:27.08:0,27,320	0/0:10,0:10:21.06:0,21,250	0/0:13,0:13:38.61:0,39,441	./.	0/0:4,0:3:9.03:0,9,108
chr10	31158531	.	CTTTCTTTCTTT	C	362.48	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=1.033;DP=294;FS=7.477;HRun=0;HaplotypeScore=84.3205;InbreedingCoeff=0.5982;MQ=53.11;MQ0=9;MQRankSum=0.353;QD=9.80;ReadPosRankSum=-2.442;VQSLOD=0.0037;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:57.08:0,57,1663	0/0:1,0:1:3.01:0,3,156	0/1:13,0:3:0.21:1,0,0	0/0:23,0:11:20.42:0,20,260	0/0:16,0:16:39.98:0,40,863	0/0:11,0:10:32.96:0,33,959	0/0:13,0:13:33.05:0,33,989	0/0:14,0:13:23.96:0,24,336	0/0:9,0:8:18.53:0,19,618	1/1:9,0:9:8.27:285,8,0	1/1:5,10:15:8.51:181,9,0	0/0:9,0:9:14.97:0,15,459	0/0:5,0:5:6.49:0,6,170	0/0:7,0:7:21.02:0,21,619	0/0:11,0:11:27.02:0,27,944	0/0:11,0:11:27.07:0,27,1003	0/0:16,0:16:33.11:0,33,709	0/0:13,0:12:27.05:0,27,665	0/0:2,0:2:2.60:0,3,10	0/0:7,0:4:9.25:0,9,55	0/0:1,0:1:0:0,0,0	0/0:11,0:11:24.01:0,24,553	0/0:15,0:15:34.34:0,34,1015	0/0:10,0:10:14.97:0,15,322	0/0:13,0:13:30.37:0,30,732	0/0:9,0:9:27.02:0,27,637	0/0:3,0:1:2.97:0,3,20	0/0:4,0:3:3.95:0,4,49
chr10	31158654	.	AT	A	13960.77	PASS	AB=0.900;AC=55;AF=0.982;AN=56;BaseQRankSum=-2.205;DP=500;FS=20.962;HRun=2;HaplotypeScore=92.9599;InbreedingCoeff=-0.0121;MQ=67.85;MQ0=1;MQRankSum=-0.591;QD=27.92;ReadPosRankSum=4.323;VQSLOD=3.3368;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:33,0:32:76.45:880,76,0	1/1:7,0:6:18.06:220,18,0	1/1:8,8:15:10.09:282,10,0	0/1:16,2:18:0.29:349,0,0	1/1:22,0:22:50.19:603,50,0	1/1:17,0:17:31.97:385,32,0	1/1:23,0:23:52.03:606,52,0	1/1:22,0:22:63.13:714,63,0	1/1:18,0:18:39.12:475,39,0	1/1:20,0:20:60.14:688,60,0	1/1:10,0:10:18.06:217,18,0	1/1:16,0:15:42.08:484,42,0	1/1:15,0:15:39.95:444,40,0	1/1:19,0:18:48.14:564,48,0	1/1:24,0:23:51.16:615,51,0	1/1:18,0:18:45.68:568,46,0	1/1:31,0:31:84.26:1004,84,0	1/1:17,0:16:44.61:524,45,0	1/1:0,10:10:17.78:209,18,0	1/1:12,0:12:24.01:277,24,0	1/1:22,0:22:61.43:718,61,0	1/1:14,0:14:26.94:296,27,0	1/1:14,0:14:24.08:296,24,0	1/1:30,0:30:83.24:966,83,0	1/1:13,0:11:24.07:283,24,0	1/1:14,0:14:38.60:468,39,0	1/1:12,0:12:31.34:365,31,0	1/1:13,0:13:39.12:462,39,0
chr10	31158988	.	C	CTTT	2344.24	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-1.463;DP=638;FS=13.022;HRun=10;HaplotypeScore=93.2830;InbreedingCoeff=0.9940;MQ=69.68;MQ0=2;MQRankSum=-1.710;QD=26.34;ReadPosRankSum=-1.680;VQSLOD=0.6963;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:87.14:0,87,1016	0/0:10,0:10:30.05:0,30,337	0/0:22,0:20:30.16:0,30,353	0/0:23,0:18:24.01:0,24,283	0/0:28,0:28:75.21:0,75,900	0/0:24,0:25:60.03:0,60,697	0/0:22,0:22:48.04:0,48,557	0/0:31,0:31:75.16:0,75,891	0/0:24,0:24:60.15:0,60,729	0/0:26,0:26:69.18:0,69,839	0/0:17,0:17:45.10:0,45,541	0/0:17,0:17:42.05:0,42,489	0/0:16,0:16:42:0,42,475	0/0:17,0:17:45.10:0,45,535	0/0:24,0:24:60.15:0,60,730	0/0:25,0:25:72.20:0,72,864	0/0:32,0:31:84.25:0,84,1021	0/0:14,0:14:39.12:0,39,474	1/1:7,10:20:34.33:549,34,0	1/1:9,11:25:41.56:655,42,0	1/1:2,10:13:14.53:237,15,0	0/0:20,0:21:40.40:0,40,507	0/0:21,0:22:40.32:0,40,467	0/0:15,0:15:36.06:0,36,437	0/0:35,0:35:87.15:0,87,1039	0/0:29,0:30:76.54:0,77,920	1/1:10,17:31:63.11:1063,63,0	0/0:17,0:20:52.38:0,52,617
chr10	31159287	.	G	GTGTGCTTTC	10176.12	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=11.693;DP=607;FS=5.302;HRun=0;HaplotypeScore=176.7489;InbreedingCoeff=0.9978;MQ=88.53;MQ0=0;MQRankSum=-13.056;QD=111.83;ReadPosRankSum=0.413;VQSLOD=5.5346;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:96.29:0,96,2817	0/0:9,0:9:27.06:0,27,780	0/0:23,0:23:69.22:0,69,1698	0/0:26,0:26:72.24:0,72,1889	0/0:19,0:19:51.14:0,51,1364	0/0:23,0:23:69.24:0,69,2132	0/0:29,0:29:87.28:0,87,2588	0/0:35,0:35:99:0,99,2708	0/0:18,0:18:51.17:0,51,1567	1/1:1,15:16:48.16:2030,48,0	1/1:0,11:12:36.12:1494,36,0	0/0:18,0:18:54.19:0,54,1695	0/0:19,0:19:57.15:0,57,1529	0/0:21,0:21:60.19:0,60,1727	0/0:33,0:33:96.29:0,96,2834	0/0:23,0:23:66.21:0,66,1968	0/0:46,0:46:99:0,135,4155	0/0:11,0:11:33.11:0,33,1022	1/1:5,5:10:27.09:938,27,0	1/1:6,13:19:54.19:2167,54,0	1/1:5,2:7:18.06:670,18,0	0/0:23,0:23:55.98:0,56,1565	0/0:20,0:20:37.17:0,37,1048	0/0:19,0:19:54.14:0,54,1629	0/0:28,0:27:75.13:0,75,2045	0/0:21,0:21:57.20:0,57,1690	1/1:9,17:27:78.25:2877,78,0	0/0:16,0:16:48.16:0,48,1513
chr10	31159289	.	AG	A	1421.15	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=13.033;DP=594;FS=9.013;HRun=1;HaplotypeScore=92.6495;InbreedingCoeff=0.9731;MQ=89.32;MQ0=0;MQRankSum=-12.618;QD=17.33;ReadPosRankSum=3.408;VQSLOD=3.4469;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,105,1675	0/0:10,0:10:27.09:0,27,431	0/0:23,0:23:66.09:0,66,973	0/0:26,0:26:75.12:0,75,1080	0/0:19,0:19:57.16:0,57,860	0/0:24,0:24:72.21:0,72,1102	0/0:29,0:29:87.30:0,87,1391	0/0:32,0:32:90.25:0,90,1388	0/0:17,0:17:51.17:0,51,814	1/1:4,15:19:53.88:496,54,0	1/1:0,12:12:35.35:230,35,0	0/0:18,0:18:54.18:0,54,862	0/0:17,0:17:51.17:0,51,810	0/0:21,0:21:63.21:0,63,1004	0/0:32,0:32:96.33:0,96,1534	0/0:23,0:23:69.24:0,69,1103	0/0:45,0:45:99:0,135,2155	0/0:11,0:11:33.11:0,33,528	1/1:2,5:7:14.74:126,15,0	1/1:4,13:17:9.43:237,9,0	1/1:0,5:5:8.97:85,9,0	0/0:26,0:26:78.22:0,78,1174	0/0:20,0:20:60.19:0,60,936	0/0:18,0:18:54.18:0,54,863	0/0:28,0:27:84.27:0,84,1317	0/0:22,0:22:66.22:0,66,1046	1/1:2,20:22:45.34:428,45,0	0/0:16,0:16:48.16:0,48,766
chr10	31159710	.	A	AT	4058.41	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-6.993;DP=662;FS=19.503;HRun=8;HaplotypeScore=61.7919;InbreedingCoeff=0.9912;MQ=79.40;MQ0=0;MQRankSum=-1.334;QD=29.41;ReadPosRankSum=-0.218;VQSLOD=1.9682;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:89.97:0,90,809	0/0:11,0:11:30:0,30,270	0/0:20,0:20:32.19:0,32,322	0/0:15,0:15:10.99:0,11,276	0/0:30,0:30:69.01:0,69,626	0/0:31,0:31:89.99:0,90,814	0/0:23,0:23:66.04:0,66,604	0/0:30,0:29:75.01:0,75,678	0/0:21,0:21:54.02:0,54,494	1/1:0,24:24:72.20:822,72,0	1/1:1,20:21:56.92:591,57,0	0/0:22,0:22:57.02:0,57,521	0/0:29,0:29:74.98:0,75,671	0/0:31,0:31:90.02:0,90,815	0/0:19,0:19:44.98:0,45,406	0/0:23,0:23:60.02:0,60,549	0/0:27,0:27:69:0,69,621	0/0:20,0:20:60.03:0,60,549	1/1:5,14:19:42.09:463,42,0	1/1:3,16:19:48.09:535,48,0	1/1:2,19:21:51.15:589,51,0	0/0:27,0:27:72.04:0,72,659	0/0:26,0:26:75.04:0,75,686	0/0:24,0:24:72.04:0,72,658	0/0:29,0:29:81.04:0,81,739	0/0:27,0:27:69.01:0,69,623	1/1:2,32:34:93.23:1058,93,0	0/0:7,0:7:21.01:0,21,192
chr10	31160282	.	TA	T	823.08	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=7.438;DP=373;FS=12.962;HRun=10;HaplotypeScore=47.3019;InbreedingCoeff=0.8810;MQ=78.65;MQ0=8;MQRankSum=-3.477;QD=14.44;ReadPosRankSum=-0.628;VQSLOD=1.9172;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:34.63:0,35,415	0/0:5,0:5:15.03:0,15,157	0/0:43,0:18:5.15:0,5,122	0/0:36,0:22:17.40:0,17,170	0/0:19,0:19:51.12:0,51,555	0/0:10,0:10:27.32:0,27,271	0/0:11,0:11:27.07:0,27,299	0/0:17,0:17:42.04:0,42,428	0/0:10,0:10:18.77:0,19,183	1/1:3,8:12:29.02:238,29,0	1/1:0,7:7:17.90:146,18,0	0/0:16,0:16:43.34:0,43,453	0/0:7,0:7:12.03:0,12,126	0/0:12,0:12:27.06:0,27,291	0/0:18,0:18:48.12:0,48,523	0/0:1,0:1:3.01:0,3,33	0/0:12,0:12:30.06:0,30,322	0/0:16,0:16:39.06:0,39,408	1/1:5,7:12:20.12:179,20,0	1/1:5,4:9:17.50:128,17,0	1/1:2,2:3:5.99:52,6,0	0/0:6,0:6:6.02:0,6,66	0/0:10,0:10:21.04:0,21,224	0/0:10,0:10:27.54:0,28,299	0/0:14,0:14:38.87:0,39,395	0/0:15,0:15:33.07:0,33,357	1/1:3,10:13:29.99:260,30,0	0/0:6,0:6:18.05:0,18,199
chr10	31160294	.	GA	G	264.38	PASS	AB=0.849;AC=9;AF=0.167;AN=54;BaseQRankSum=4.431;DP=340;FS=4.309;HRun=11;HaplotypeScore=47.4280;InbreedingCoeff=0.6148;MQ=85.61;MQ0=9;MQRankSum=-2.128;QD=7.15;ReadPosRankSum=-0.532;VQSLOD=1.2761;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:45.08:0,45,462	0/1:4,1:5:9.61:10,0,113	0/0:50,0:19:39.83:0,40,307	0/0:40,0:23:14.09:0,14,145	0/0:16,0:16:33.08:0,33,352	0/0:10,0:10:11.23:0,11,245	0/0:9,0:9:21.05:0,21,224	0/0:16,0:17:16.13:0,16,346	0/0:7,0:7:17.96:0,18,177	0/0:10,0:10:19.62:0,20,107	0/0:6,0:6:14.66:0,15,89	0/0:15,0:15:42.11:0,42,448	0/0:5,0:5:12.02:0,12,121	0/0:9,0:9:21.05:0,21,223	0/0:17,1:18:26.46:0,26,473	./.	0/0:10,0:10:27.07:0,27,288	0/0:12,0:12:27.07:0,27,288	1/1:2,7:9:20.97:172,21,0	1/1:3,3:6:11.97:97,12,0	0/1:3,2:5:2.82:19,0,3	0/1:2,0:2:18.62:19,0,26	0/0:9,0:9:27.07:0,27,288	0/0:10,0:10:24.34:0,24,226	0/0:12,1:14:14.27:0,14,334	0/0:12,0:12:24.05:0,24,250	1/1:6,4:10:11.96:98,12,0	0/0:6,0:6:18.05:0,18,192
chr10	31160530	.	GACTTCTTCCTGGCAGTTCTTCCTCTTCACTTTAGA	G	4785.49	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=7.585;DP=512;FS=7.276;HRun=0;HaplotypeScore=427.1221;InbreedingCoeff=0.9253;MQ=99.53;MQ0=1;MQRankSum=-5.741;QD=111.29;ReadPosRankSum=3.004;VQSLOD=2.4608;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,144,20787	0/0:7,0:7:21.07:0,21,2311	0/0:33,0:33:95.11:0,95,5739	0/0:36,0:35:96.80:0,97,6895	0/0:23,0:23:66.23:0,66,9454	0/0:10,0:10:30.10:0,30,4501	0/0:22,0:22:60.21:0,60,7905	0/0:28,0:28:84.29:0,84,7092	0/0:17,0:17:51.18:0,51,7133	0/0:15,0:15:45.14:0,45,5111	0/0:13,0:13:39.13:0,39,4592	0/0:17,0:17:51.18:0,51,7119	0/0:12,0:12:36.12:0,36,5415	0/0:13,0:13:39.11:0,39,5431	0/0:20,0:20:60.21:0,60,8922	0/0:18,0:18:54.19:0,54,7621	0/0:24,0:24:72.25:0,72,10584	0/0:27,0:27:81.24:0,81,10275	1/1:5,6:11:15.05:770,15,0	1/1:3,3:6:9.03:423,9,0	1/1:4,5:9:3.01:277,3,0	0/0:13,0:13:39.13:0,39,5378	0/0:11,0:11:33.11:0,33,3626	0/0:23,0:23:69.24:0,69,9489	0/0:14,0:14:42.14:0,42,4825	0/0:15,0:15:45.15:0,45,6240	1/1:4,13:17:36.12:3316,36,0	0/0:9,0:9:27.09:0,27,3621
chr10	31161157	.	TCA	T	5205.07	PASS	AB=0.944;AC=13;AF=0.232;AN=56;BaseQRankSum=15.385;DP=808;FS=11.442;HRun=0;HaplotypeScore=96.4809;InbreedingCoeff=0.8966;MQ=71.50;MQ0=0;MQRankSum=-0.633;QD=24.90;ReadPosRankSum=0.090;VQSLOD=4.8824;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,1:50:98.30:0,98,2138	0/0:11,0:11:27.08:0,27,423	0/0:37,0:29:49.37:0,49,780	0/0:28,0:20:39.12:0,39,605	0/0:19,0:19:51.15:0,51,814	0/0:29,0:29:78.27:0,78,1281	0/0:32,0:32:75.26:0,75,1240	0/0:34,0:34:78.25:0,78,1234	0/0:25,0:25:69.24:0,69,1143	1/1:4,26:30:78.24:972,78,0	1/1:5,20:25:57.18:719,57,0	0/0:36,0:36:90.31:0,90,1489	0/0:27,0:27:75.24:0,75,1208	0/1:32,2:34:20.13:20,0,1292	0/0:40,0:40:99:0,108,1789	0/0:28,0:28:69.24:0,69,1138	0/0:36,0:36:99:0,105,1714	0/0:33,0:33:84.29:0,84,1393	1/1:3,16:19:51.14:617,51,0	1/1:2,18:20:48.15:606,48,0	1/1:5,53:56:99:1552,123,0	0/0:27,0:27:66.23:0,66,1091	0/0:20,0:20:54.18:0,54,884	0/0:34,0:34:96.33:0,96,1584	0/0:27,0:27:69.24:0,69,1147	0/0:20,1:21:19.32:0,19,857	1/1:3,20:23:57.18:719,57,0	0/0:5,0:5:15.05:0,15,245
chr10	31161785	.	GAC	G	311.40	PASS	AB=0.872;AC=16;AF=0.308;AN=52;BaseQRankSum=4.205;DP=497;FS=2.513;HRun=0;HaplotypeScore=67.1612;InbreedingCoeff=-0.2911;MQ=66.91;MQ0=14;MQRankSum=1.464;QD=1.25;ReadPosRankSum=1.457;VQSLOD=1.5676;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:21,4:25:77.82:78,0,298	0/0:6,0:6:12.01:0,12,156	./.	./.	0/1:12,1:15:14.09:14,0,321	0/1:10,0:10:17.99:18,0,124	0/0:24,0:24:24.05:0,24,308	0/1:24,1:24:15.63:16,0,138	0/0:11,0:11:14.99:0,15,180	0/0:17,0:20:24.28:0,24,229	0/0:16,0:23:9:0,9,95	0/0:13,0:13:24.05:0,24,320	0/1:9,3:12:15.21:15,0,205	0/1:9,2:11:15.22:15,0,184	0/1:14,1:16:6.21:6,0,294	0/1:6,1:9:43.42:43,0,118	0/0:27,0:28:9.37:0,9,526	0/1:14,5:20:33.45:33,0,336	0/0:7,0:7:8.97:0,9,71	0/0:9,0:10:15:0,15,144	0/0:29,0:27:23.61:0,24,285	0/1:11,1:13:29.36:29,0,159	0/1:8,1:9:35.38:35,0,79	0/1:30,4:35:65.80:66,0,466	0/1:17,3:19:6.62:7,0,243	0/1:17,0:18:20.06:20,0,234	0/0:12,0:19:11.93:0,12,112	1/1:10,0:10:6.02:67,6,0
chr10	31162684	.	T	TC	1045.30	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-4.789;DP=737;FS=1.383;HRun=7;HaplotypeScore=74.3297;InbreedingCoeff=0.9957;MQ=89.61;MQ0=0;MQRankSum=-3.970;QD=23.23;ReadPosRankSum=-0.954;VQSLOD=3.2253;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:78.09:0,78,747	0/0:7,0:7:21.03:0,21,203	0/0:31,0:31:75.01:0,75,707	0/0:24,0:24:63.09:0,63,605	0/0:38,0:39:99:0,101,960	0/0:32,0:32:90.14:0,90,869	0/0:24,0:24:66.10:0,66,637	0/0:42,0:42:55.26:0,55,701	0/0:24,0:24:66.09:0,66,631	1/1:7,22:29:63.14:732,63,0	1/1:2,14:16:36.11:435,36,0	0/0:39,0:39:99:0,102,985	0/0:29,0:29:72.10:0,72,695	0/0:30,0:30:84.09:0,84,802	0/0:29,0:29:75.10:0,75,719	0/0:23,0:23:63.09:0,63,608	0/0:18,0:18:48.08:0,48,463	0/0:19,0:19:54.08:0,54,521	0/0:18,0:18:48.07:0,48,463	0/0:33,0:34:80.14:0,80,759	0/0:46,0:46:99:0,123,1187	0/0:23,0:23:60.07:0,60,573	0/0:21,0:21:54.05:0,54,511	0/0:27,0:27:63.04:0,63,599	0/0:27,0:27:66:0,66,619	0/0:23,0:23:63.10:0,63,608	0/0:21,0:21:54.08:0,54,521	0/0:7,0:7:21.01:0,21,196
chr10	31165238	.	C	CTGGCG	1977.78	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=0.833;DP=659;FS=5.140;HRun=0;HaplotypeScore=131.6653;InbreedingCoeff=0.9820;MQ=85.87;MQ0=0;MQRankSum=-4.813;QD=48.24;ReadPosRankSum=-1.664;VQSLOD=3.6038;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:96.24:0,96,1716	0/0:13,0:13:36.11:0,36,675	0/0:21,0:21:48.37:0,48,1040	0/0:22,0:22:50.11:0,50,837	0/0:23,0:23:48.11:0,48,848	0/0:23,0:23:60.19:0,60,1171	0/0:26,0:26:66.23:0,66,1368	0/0:17,0:17:42.13:0,42,783	0/0:27,0:27:72.25:0,72,1490	1/1:16,10:27:51.17:1498,51,0	1/1:3,11:14:21.07:600,21,0	0/0:22,0:22:60.19:0,60,1207	0/0:33,0:33:93.30:0,93,1875	0/0:29,0:29:72.23:0,72,1455	0/0:36,0:36:96.25:0,96,1869	0/0:21,0:21:42.14:0,42,871	0/0:32,0:32:93.32:0,93,1927	0/0:23,0:23:63.19:0,63,1265	0/0:17,0:17:51.15:0,51,1010	0/0:20,0:20:51.13:0,51,866	0/0:49,0:49:99:0,132,2608	0/0:22,0:22:42.07:0,42,582	0/0:15,0:15:39.10:0,39,660	0/0:26,0:26:69.24:0,69,1415	0/0:12,0:12:33.11:0,33,667	0/0:21,0:21:48.14:0,48,890	0/0:23,0:23:66.23:0,66,1332	0/0:5,0:5:12.04:0,12,249
chr10	31166699	.	A	AT	1020.26	PASS	AB=0.944;AC=5;AF=0.089;AN=56;BaseQRankSum=-4.354;DP=633;FS=0.000;HRun=9;HaplotypeScore=62.5980;InbreedingCoeff=0.7974;MQ=77.40;MQ0=0;MQRankSum=-2.993;QD=15.94;ReadPosRankSum=1.004;VQSLOD=3.6896;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,117,999	0/0:6,0:6:18:0,18,156	0/0:20,0:19:24.37:0,24,309	0/0:21,0:21:30.75:0,31,271	0/0:44,0:44:99:0,117,1016	0/0:21,0:21:56.96:0,57,491	0/0:18,1:19:14.81:0,15,357	0/0:22,0:22:65.73:0,66,559	0/0:14,0:14:21.90:0,22,270	1/1:6,17:24:53.94:558,54,0	1/1:3,20:23:54.10:582,54,0	0/0:19,0:20:56:0,56,468	0/0:27,0:27:71.94:0,72,616	0/0:18,0:18:47.97:0,48,417	0/0:27,0:27:71.97:0,72,625	0/0:22,0:22:59.97:0,60,517	0/0:22,0:22:62.96:0,63,540	0/1:16,1:17:5.67:6,0,340	0/0:16,0:16:41.99:0,42,365	0/0:33,0:33:89.19:0,89,762	0/0:12,0:12:26.99:0,27,234	0/0:22,0:22:59.98:0,60,521	0/0:28,0:28:77.97:0,78,673	0/0:12,0:12:35.98:0,36,308	0/0:21,0:21:59.99:0,60,521	0/0:36,2:38:38.59:0,39,790	0/0:32,0:32:86.94:0,87,747	0/0:7,0:7:12:0,12,104
chr10	31168203	.	AACAC	A	883.20	PASS	AB=0.961;AC=18;AF=0.333;AN=54;BaseQRankSum=4.063;DP=494;FS=8.632;HRun=0;HaplotypeScore=85.3548;InbreedingCoeff=0.4764;MQ=64.88;MQ0=8;MQRankSum=1.255;QD=4.19;ReadPosRankSum=0.681;VQSLOD=0.6936;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:25,1:26:11.17:11,0,538	0/0:3,0:3:3.01:0,3,56	./.	0/0:18,0:13:0:0,0,0	0/0:12,0:12:15.05:0,15,322	0/1:21,0:21:26.29:26,0,165	0/0:28,0:27:0.45:0,0,269	0/0:34,0:33:20.75:0,21,161	0/1:13,0:11:14.80:20,0,15	1/1:18,0:18:18.82:155,19,0	1/1:11,0:11:5.80:60,6,0	0/0:13,0:12:13.24:0,13,195	0/0:9,0:9:15.04:0,15,229	0/0:17,0:16:11.50:0,11,143	1/1:6,6:12:12.04:184,12,0	0/0:9,0:9:9.03:0,9,148	0/0:27,0:28:8.33:0,8,677	0/0:15,0:15:22.84:0,23,373	1/1:22,5:26:9.11:100,9,0	1/1:11,7:19:8.94:87,9,0	1/1:17,12:28:6.02:93,6,0	0/0:11,0:12:8.74:0,9,106	0/0:12,0:13:5.88:0,6,86	0/0:22,0:24:42.35:0,42,839	0/1:13,1:15:23.24:23,0,236	0/0:17,0:17:14.82:0,15,183	1/1:16,2:20:26.20:300,26,0	0/0:4,0:4:12.02:0,12,235
chr10	31168241	.	CACACACAA	C	274.44	PASS	AB=0.937;AC=5;AF=0.089;AN=56;BaseQRankSum=4.488;DP=660;FS=7.737;HRun=0;HaplotypeScore=162.0042;InbreedingCoeff=0.2108;MQ=53.20;MQ0=26;MQRankSum=-1.121;QD=3.81;ReadPosRankSum=-1.237;VQSLOD=1.9432;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:40:64.86:0,65,1562	0/0:8,0:8:21.05:0,21,421	0/0:22,0:8:0.60:0,1,121	0/0:24,0:9:12.50:0,13,143	0/0:19,0:19:42.06:0,42,811	0/0:23,0:23:30.67:0,31,673	0/0:21,0:20:35.51:0,36,749	0/0:43,0:40:71.57:0,72,742	0/1:13,4:15:50.99:51,0,146	1/1:26,0:25:9.58:205,10,0	0/1:14,0:14:47.72:98,0,48	0/0:18,0:18:47.22:0,47,818	0/0:23,0:22:57.78:0,58,1025	0/0:24,0:22:43.82:0,44,721	0/0:26,0:26:65.42:0,65,671	0/0:19,0:19:47.74:0,48,657	0/0:34,0:34:30.91:0,31,1359	0/0:26,0:25:52.58:0,53,1340	0/1:15,0:14:36.90:37,0,219	0/0:15,0:14:0.63:0,1,205	0/0:36,0:33:55.86:0,56,500	0/0:17,0:17:11.86:0,12,499	0/0:16,0:15:8.52:0,9,404	0/0:39,0:38:68.92:0,69,2112	0/0:31,0:31:65.65:0,66,1313	0/0:23,0:21:50.39:0,50,698	0/0:27,0:27:56.20:0,56,626	0/0:11,0:11:32.94:0,33,768
chr10	31168245	.	CACAA	C	783.81	PASS	AB=0.978;AC=11;AF=0.196;AN=56;BaseQRankSum=7.902;DP=664;FS=46.682;HRun=0;HaplotypeScore=118.9354;InbreedingCoeff=0.2149;MQ=54.49;MQ0=24;MQRankSum=0.606;QD=4.08;ReadPosRankSum=1.018;VQSLOD=0.4408;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:41:44.51:0,45,915	0/0:8,0:8:20.95:0,21,215	0/0:23,0:10:13.25:0,13,145	0/0:26,0:11:15.42:0,15,166	0/0:20,0:20:46.04:0,46,517	0/1:20,1:21:55.32:55,0,364	0/0:19,0:18:35.23:0,35,477	0/0:47,0:44:74.76:0,75,791	0/1:18,0:16:2.06:2,0,170	1/1:27,0:26:51.48:317,51,0	1/1:14,0:14:27.70:136,28,0	0/0:18,0:18:11.39:0,11,424	0/0:23,0:22:55.71:0,56,536	0/0:23,0:21:36.51:0,37,461	0/1:25,1:26:60.48:60,0,379	0/0:16,0:16:46.84:0,47,479	0/0:34,0:34:32.41:0,32,822	0/1:26,0:25:4.99:5,0,655	0/1:18,0:16:99:115,0,166	0/1:16,0:15:33.65:34,0,94	0/0:38,0:35:4.97:0,5,371	0/0:16,0:16:12.19:0,12,303	0/0:17,0:16:12.53:0,13,306	0/0:38,0:37:68.57:0,69,1300	0/0:31,0:31:29.16:0,29,675	0/0:21,0:19:47.97:0,48,422	0/1:24,2:26:99:213,0,317	0/0:11,0:11:29.89:0,30,439
chr10	31168249	.	AAC	A	883.16	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=2.236;DP=644;FS=0.000;HRun=0;HaplotypeScore=96.2686;InbreedingCoeff=0.7671;MQ=55.02;MQ0=23;MQRankSum=0.357;QD=16.98;ReadPosRankSum=1.021;VQSLOD=3.6793;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:37:68.36:0,68,1045	0/0:8,0:8:18.06:0,18,281	0/0:25,0:12:26.93:0,27,387	0/0:28,0:12:31.47:0,31,344	0/0:20,0:20:38.64:0,39,580	0/0:19,0:19:31.03:0,31,499	0/0:21,0:20:42.14:0,42,670	0/0:42,0:39:84.10:0,84,1231	0/0:18,0:16:18.85:0,19,346	1/1:23,3:26:53.07:627,53,0	1/1:11,1:12:30.09:369,30,0	0/0:18,0:18:36.11:0,36,539	0/0:23,0:22:39.05:0,39,578	0/0:23,0:21:44.36:0,44,651	0/0:25,0:25:51.53:0,52,798	0/0:16,0:16:41.35:0,41,631	0/0:28,0:28:12.92:0,13,669	0/0:26,0:25:56.49:0,56,785	0/0:19,0:17:33.86:0,34,493	0/1:14,0:13:16.22:16,0,217	0/0:38,0:35:56.76:0,57,782	0/0:16,0:16:29.98:0,30,419	0/0:16,0:15:30.10:0,30,437	0/0:36,0:35:83.84:0,84,1168	0/0:30,0:30:19.19:0,19,927	0/0:19,0:17:33.51:0,34,544	0/0:27,0:27:37.53:0,38,740	0/0:12,0:12:33.11:0,33,508
chr10	31168337	.	TAA	T	580.78	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-3.678;DP=533;FS=12.818;HRun=12;HaplotypeScore=94.3581;InbreedingCoeff=0.9783;MQ=75.50;MQ0=0;MQRankSum=0.357;QD=20.03;ReadPosRankSum=0.575;VQSLOD=1.4832;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:40:99:0,108,1494	0/0:4,0:4:12.04:0,12,179	0/0:15,0:15:26.35:0,26,342	0/0:12,0:12:19.03:0,19,155	0/0:16,0:17:45.15:0,45,654	0/0:21,0:22:62.70:0,63,902	0/0:22,0:23:56.67:0,57,796	0/0:33,0:35:81.25:0,81,1155	0/0:12,0:12:30.10:0,30,447	1/1:3,15:18:45.09:458,45,0	1/1:1,10:11:24.05:244,24,0	0/0:13,0:13:39.11:0,39,540	0/0:14,0:15:38.98:0,39,516	0/0:19,0:19:51.16:0,51,724	0/0:17,0:19:44.57:0,45,557	0/0:10,0:10:27.08:0,27,369	0/0:34,0:34:90.28:0,90,1305	0/0:23,0:23:63.05:0,63,855	0/0:26,0:26:60.14:0,60,817	0/0:19,0:19:45.14:0,45,650	0/0:19,0:19:54.16:0,54,780	0/0:13,0:14:39.11:0,39,547	0/0:17,0:18:50.65:0,51,706	0/0:22,0:22:54.14:0,54,778	0/0:18,0:18:45.14:0,45,636	0/0:21,0:21:53.65:0,54,721	0/0:20,0:20:56.75:0,57,765	0/0:10,0:10:30.10:0,30,447
chr10	31168594	.	G	GA	596.19	PASS	AB=0.820;AC=5;AF=0.089;AN=56;BaseQRankSum=-5.856;DP=532;FS=0.679;HRun=10;HaplotypeScore=52.1264;InbreedingCoeff=0.3549;MQ=61.45;MQ0=5;MQRankSum=0.386;QD=10.10;ReadPosRankSum=-1.421;VQSLOD=1.8919;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:53:99:0,118,947	0/0:5,0:5:8.98:0,9,74	0/0:12,0:5:13.80:0,14,102	0/0:7,0:5:14.75:0,15,105	0/0:26,0:26:59.91:0,60,492	0/0:16,1:17:12.96:0,13,313	0/0:27,0:27:71.91:0,72,591	0/0:15,0:15:32.94:0,33,271	0/0:10,0:10:23.97:0,24,197	1/1:4,15:19:45.10:472,45,0	0/1:3,11:14:19.21:226,0,19	0/0:20,0:20:32.95:0,33,271	0/0:10,0:10:20.97:0,21,172	0/1:8,0:8:1.73:2,0,101	0/0:20,0:20:53.92:0,54,440	0/0:17,1:18:9.95:0,10,288	0/0:37,0:37:92.87:0,93,763	0/0:27,2:30:12.98:0,13,508	0/0:25,1:27:29.95:0,30,442	0/0:16,0:16:35.29:0,35,276	0/1:16,2:18:10.04:10,0,337	0/0:14,0:14:38.94:0,39,320	0/0:15,0:15:38.93:0,39,317	0/0:28,0:28:74.87:0,75,610	0/0:24,0:24:50.93:0,51,419	0/0:19,1:20:27.95:0,28,436	0/0:12,0:13:32:0,32,252	0/0:8,0:8:20.97:0,21,172
chr10	31170538	.	CG	C	1497.01	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=10.567;DP=594;FS=1.159;HRun=3;HaplotypeScore=63.5280;InbreedingCoeff=0.8740;MQ=77.34;MQ0=0;MQRankSum=-0.058;QD=33.27;ReadPosRankSum=0.698;VQSLOD=3.9427;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:57.18:0,57,802	0/0:15,0:15:42.14:0,42,604	0/0:14,0:14:0.73:0,1,331	0/0:20,0:20:21.91:0,22,518	0/0:19,0:19:57.13:0,57,775	0/0:24,0:24:72.17:0,72,977	0/0:17,0:17:51.16:0,51,717	0/0:22,0:22:66.20:0,66,915	0/0:17,0:17:48.15:0,48,673	1/1:1,27:28:84.25:1024,84,0	1/1:1,16:17:48.15:595,48,0	0/0:23,0:23:66.22:0,66,949	0/0:18,0:18:54.17:0,54,758	0/0:16,0:16:48.14:0,48,658	0/0:27,0:27:81.24:0,81,1126	0/0:21,0:21:60.20:0,60,862	0/0:36,0:36:99:0,105,1489	0/0:24,0:24:69.23:0,69,990	0/0:17,0:17:48.16:0,48,690	0/0:12,0:12:33.11:0,33,474	0/0:45,0:45:99:0,132,1892	0/0:20,0:20:54.18:0,54,774	0/0:13,0:13:39.09:0,39,517	0/0:36,0:36:99:0,105,1490	0/0:20,0:20:60.20:0,60,860	0/0:26,1:27:41.06:0,41,1026	0/0:22,0:22:66.17:0,66,889	0/0:4,0:4:12.04:0,12,172
chr10	31170568	.	GAA	G	366.28	PASS	AB=0.778;AC=2;AF=0.036;AN=56;BaseQRankSum=6.781;DP=659;FS=0.976;HRun=2;HaplotypeScore=89.4918;InbreedingCoeff=-0.0372;MQ=73.76;MQ0=0;MQRankSum=5.943;QD=6.78;ReadPosRankSum=-2.013;VQSLOD=-0.4720;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:78.27:0,78,1571	0/0:12,0:12:36.12:0,36,731	0/1:14,9:23:99:303,0,738	0/1:25,5:30:99:152,0,1137	0/0:27,0:27:76.93:0,77,1534	0/0:20,0:20:60.19:0,60,1183	0/0:21,0:21:63.22:0,63,1269	0/0:21,0:21:63.22:0,63,1276	0/0:16,0:16:48.16:0,48,941	0/0:26,0:26:78.26:0,78,1544	0/0:13,0:13:39.09:0,39,751	0/0:26,0:26:75.24:0,75,1488	0/0:19,0:19:57.20:0,57,1138	0/0:19,0:19:57.20:0,57,1146	0/0:29,0:29:87.28:0,87,1731	0/0:20,0:20:60.21:0,60,1204	0/0:33,0:33:99:0,99,2001	0/0:26,0:26:78.25:0,78,1524	0/0:18,0:18:51.18:0,51,1037	0/0:17,0:17:51.18:0,51,1035	0/0:47,0:47:99:0,141,2818	0/0:25,0:25:75.23:0,75,1452	0/0:18,0:18:54.19:0,54,1097	0/0:34,0:34:99:0,102,1998	0/0:18,0:18:51.18:0,51,1037	0/0:35,0:35:99:0,105,2127	0/0:32,0:32:96.33:0,96,1948	0/0:7,0:7:21.07:0,21,427
chr10	31171053	.	TGTGGG	T	1387.16	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.340;DP=483;FS=0.000;HRun=0;HaplotypeScore=114.5176;InbreedingCoeff=0.9724;MQ=64.88;MQ0=1;MQRankSum=-4.393;QD=53.35;ReadPosRankSum=-1.151;VQSLOD=3.7131;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,120,2143	0/0:6,0:6:15.05:0,15,280	0/0:14,0:7:13.57:0,14,284	0/0:14,0:15:17.80:0,18,525	0/0:20,0:20:60.20:0,60,1093	0/0:20,0:20:45.14:0,45,874	0/0:21,0:21:57.18:0,57,1046	0/0:22,0:22:63.16:0,63,981	0/0:9,0:9:27.08:0,27,761	1/1:0,15:15:45.12:847,45,0	1/1:1,10:11:30.10:661,30,0	0/0:12,0:12:33.10:0,33,583	0/0:15,0:15:36.12:0,36,684	0/0:10,0:10:30.09:0,30,528	0/0:17,0:17:51.15:0,51,1394	0/0:11,0:11:30.08:0,30,498	0/0:25,0:25:69.20:0,69,1214	0/0:27,0:27:75.23:0,75,1393	0/0:25,0:25:63.20:0,63,1491	0/0:9,0:9:27.07:0,27,577	0/0:20,0:20:51.12:0,51,1287	0/0:8,0:8:24.05:0,24,394	0/0:10,0:10:24.07:0,24,416	0/0:27,0:27:72.21:0,72,1309	0/0:19,0:19:54.13:0,54,888	0/0:12,0:12:33.56:0,34,528	0/0:21,0:21:57.13:0,57,1468	0/0:14,0:14:39.13:0,39,729
chr10	31171055	.	TG	T	6596.28	PASS	AB=0.917;AC=43;AF=0.768;AN=56;BaseQRankSum=3.551;DP=475;FS=8.348;HRun=10;HaplotypeScore=57.7879;InbreedingCoeff=0.6828;MQ=64.00;MQ0=1;MQRankSum=1.525;QD=16.66;ReadPosRankSum=3.931;VQSLOD=5.1673;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,40:46:99:911,105,0	1/1:0,6:6:15:130,15,0	0/0:14,0:7:14.93:0,15,144	0/1:16,0:15:31.49:31,0,79	1/1:2,18:20:59.96:515,60,0	1/1:5,14:19:5.78:274,6,0	1/1:2,18:20:50.99:443,51,0	1/1:10,13:23:38.94:334,39,0	0/0:10,0:10:27.06:0,27,290	1/1:15,0:15:24.71:76,25,0	1/1:10,0:10:22.20:68,22,0	1/1:1,11:12:29.99:260,30,0	1/1:1,14:15:32.99:286,33,0	1/1:1,9:10:26.99:234,27,0	0/0:17,0:17:36.09:0,36,390	1/1:2,9:11:23.99:208,24,0	1/1:4,23:27:57.87:497,58,0	1/1:2,25:27:68.97:599,69,0	0/1:19,4:23:53.13:53,0,362	0/1:8,1:9:8.01:8,0,148	0/0:18,0:18:39.09:0,39,423	1/1:3,5:8:14.95:123,15,0	1/1:3,7:10:20.99:182,21,0	1/1:5,22:27:62.72:531,63,0	1/1:3,13:16:41.99:363,42,0	1/1:5,6:11:14.82:130,15,0	0/0:19,1:20:19.05:0,19,429	1/1:1,14:15:38.98:339,39,0
chr10	31171234	.	A	ATT	5912.06	PASS	AB=0.985;AC=40;AF=0.741;AN=54;BaseQRankSum=-3.470;DP=356;FS=1.129;HRun=10;HaplotypeScore=50.4311;InbreedingCoeff=0.7225;MQ=79.23;MQ0=2;MQRankSum=-0.987;QD=20.46;ReadPosRankSum=0.910;VQSLOD=3.3170;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,20:24:66.20:919,66,0	1/1:2,4:6:12.04:179,12,0	0/1:31,0:21:1.48:1,0,137	0/1:26,0:17:21.27:21,0,89	1/1:2,9:12:32.55:416,33,0	1/1:2,11:13:27.09:402,27,0	1/1:1,3:4:5.95:89,6,0	1/1:6,14:22:47.64:662,48,0	0/0:5,0:5:12:0,12,121	1/1:2,0:20:44.37:187,44,0	1/1:2,0:15:29.70:105,30,0	1/1:1,7:9:20.56:277,21,0	1/1:1,6:7:12.04:179,12,0	1/1:1,7:8:12.04:179,12,0	0/0:11,0:11:30.06:0,30,305	1/1:5,0:5:3.01:42,3,0	1/1:1,20:22:44.64:632,45,0	1/1:2,11:13:27.09:403,27,0	0/0:13,0:13:27.03:0,27,275	0/0:10,0:9:18.03:0,18,183	0/0:6,0:6:15.03:0,15,153	./.	1/1:4,2:6:3.01:45,3,0	1/1:0,2:3:5.51:53,6,0	1/1:1,11:12:26.58:366,27,0	1/1:2,15:18:48.16:700,48,0	0/0:21,0:21:60.13:0,60,608	1/1:6,0:10:8.46:54,8,0
chr10	31171775	.	G	GA	10802.69	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-2.404;DP=486;FS=5.863;HRun=6;HaplotypeScore=55.6165;InbreedingCoeff=0.9857;MQ=65.54;MQ0=6;MQRankSum=-1.568;QD=30.43;ReadPosRankSum=1.894;VQSLOD=5.5448;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,42:43:99:1359,108,0	1/1:2,5:7:12.04:151,12,0	0/0:16,0:10:24.86:0,25,262	0/0:18,0:12:33.06:0,33,330	1/1:1,20:21:57.05:663,57,0	1/1:1,22:23:66.18:813,66,0	1/1:3,13:16:39.10:472,39,0	1/1:6,19:24:54.14:640,54,0	0/0:21,0:21:63.13:0,63,637	1/1:4,7:11:24.08:300,24,0	1/1:1,10:10:27.04:316,27,0	1/1:0,16:16:45.14:566,45,0	1/1:2,12:14:36.12:453,36,0	1/1:1,19:20:51.07:642,51,0	0/0:16,0:16:39.08:0,39,398	1/1:2,9:11:18.06:226,18,0	1/1:4,38:42:99:1258,102,0	1/1:2,14:16:42.13:528,42,0	0/0:21,0:21:48.07:0,48,475	0/0:10,0:10:27.05:0,27,270	0/0:10,0:10:30.07:0,30,306	1/1:2,6:8:15.05:189,15,0	1/1:1,6:7:18.06:226,18,0	1/1:2,19:21:51.16:642,51,0	1/1:1,19:20:57.18:717,57,0	1/1:2,13:15:39.11:477,39,0	0/0:19,0:19:54.12:0,54,550	1/1:4,4:8:14.91:166,15,0
chr10	31172651	.	TA	T	8589.52	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=13.388;DP=489;FS=1.289;HRun=8;HaplotypeScore=77.1817;InbreedingCoeff=0.9727;MQ=69.44;MQ0=0;MQRankSum=-0.267;QD=25.34;ReadPosRankSum=1.111;VQSLOD=5.5952;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,22:22:66.11:637,66,0	1/1:1,6:7:15.02:145,15,0	0/0:9,0:9:17.40:0,17,159	0/0:5,0:5:5.69:0,6,65	1/1:5,23:28:66:624,66,0	1/1:0,17:17:51.08:492,51,0	1/1:1,11:12:33.05:319,33,0	1/1:4,24:27:69.09:660,69,0	0/0:11,0:11:27.08:0,27,326	1/1:2,14:16:42.07:405,42,0	1/1:3,13:16:38.98:364,39,0	1/1:2,18:20:51.08:492,51,0	1/1:1,15:16:42.02:396,42,0	1/1:2,16:18:48.07:463,48,0	0/0:25,0:25:66.20:0,66,797	1/1:1,10:11:30.04:290,30,0	1/1:0,16:16:45.07:435,45,0	1/1:3,19:22:54.08:521,54,0	0/0:30,0:30:72.22:0,72,869	0/0:25,0:25:60.18:0,60,716	0/0:14,0:14:39.08:0,39,455	1/1:1,18:19:54.09:521,54,0	1/1:1,17:18:47.96:463,48,0	1/1:0,5:5:15.02:145,15,0	1/1:3,13:16:39.06:377,39,0	1/1:2,23:25:69.11:666,69,0	0/0:31,0:31:78.24:0,78,942	1/1:0,7:7:18.02:174,18,0
chr10	31172827	.	TG	T	4938.41	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=2.254;DP=326;FS=1.717;HRun=3;HaplotypeScore=80.3184;InbreedingCoeff=0.9123;MQ=70.03;MQ0=7;MQRankSum=-5.968;QD=28.22;ReadPosRankSum=1.420;VQSLOD=4.2156;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,5:6:14.99:154,15,0	1/1:0,6:6:14.99:165,15,0	0/0:30,0:17:16.05:0,16,310	0/0:29,1:9:15.48:0,15,103	1/1:6,21:27:81.20:935,81,0	1/1:2,4:6:15.05:184,15,0	1/1:3,3:6:18:186,18,0	1/1:2,18:20:54.15:634,54,0	0/0:4,0:4:9.03:0,9,129	0/0:22,0:22:9.42:0,9,312	0/0:14,0:14:18.96:0,19,185	1/1:2,4:6:15:159,15,0	1/1:2,5:7:21.05:245,21,0	1/1:3,3:6:15.03:163,15,0	0/0:6,0:6:15.05:0,15,215	1/1:2,3:5:15.03:165,15,0	1/1:5,9:11:27.08:321,27,0	1/1:4,11:14:36.01:401,36,0	0/0:9,0:9:20.92:0,21,174	0/0:16,0:16:41.92:0,42,348	0/0:5,0:4:6:0,6,52	1/1:1,7:8:18.01:205,18,0	1/1:4,4:8:18.03:197,18,0	1/1:2,3:5:3.01:37,3,0	1/1:2,12:13:33.56:394,34,0	1/1:5,4:9:21.04:219,21,0	0/0:14,0:14:38.91:0,39,319	1/1:3,3:6:15.04:174,15,0
chr10	31172829	.	GGTTTTTTTTGTTTTTTTT	G	2464.01	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=1.361;DP=335;FS=10.181;HRun=0;HaplotypeScore=182.0901;InbreedingCoeff=-0.0643;MQ=68.42;MQ0=10;MQRankSum=-2.301;QD=11.90;ReadPosRankSum=4.339;VQSLOD=1.7807;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:8,0:6:12:19,0,12	0/1:6,0:6:21.90:26,0,22	0/0:35,0:17:23.64:0,24,401	0/0:30,0:9:6.32:0,6,121	0/1:28,0:28:36.81:475,0,37	0/1:6,0:6:1.89:73,0,2	0/1:8,0:8:33.19:33,0,72	0/1:18,0:18:38.77:39,0,100	0/0:4,0:4:12.04:0,12,805	1/1:20,3:23:23.91:796,24,0	1/1:12,1:13:27.51:207,28,0	0/1:7,0:7:35.83:124,0,36	0/1:7,0:7:54.72:55,0,87	0/1:6,0:6:8.55:19,0,9	0/0:6,0:6:15.04:0,15,339	0/0:5,0:5:7.53:0,8,28	0/1:15,0:10:62.81:63,0,125	0/1:16,0:15:25.58:209,0,26	0/0:9,0:9:24.01:0,24,364	0/0:16,0:16:27.72:0,28,1575	0/0:7,0:6:6.02:0,6,207	0/1:8,0:8:20.87:81,0,21	0/1:7,0:7:1.21:74,0,1	1/1:5,0:5:2.04:6,2,0	0/1:13,0:12:70.46:172,0,70	1/1:7,0:7:10.49:88,10,0	0/0:14,0:14:30.05:0,30,1040	0/1:6,0:6:2.29:75,0,2
chr10	31172830	.	G	GT	919.42	PASS	AB=1.000;AC=10;AF=0.179;AN=56;BaseQRankSum=-5.394;DP=361;FS=18.794;HRun=8;HaplotypeScore=107.4073;InbreedingCoeff=0.5130;MQ=64.70;MQ0=12;MQRankSum=1.465;QD=12.77;ReadPosRankSum=0.016;VQSLOD=1.6623;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:6:9.52:0,10,36	0/0:6,0:6:9.14:0,9,32	0/0:35,0:16:0.50:0,0,176	0/0:31,0:9:1.78:0,2,55	0/0:28,0:28:41.87:0,42,172	0/0:6,0:6:8.70:0,9,34	0/0:9,0:9:0.53:0,1,26	0/0:18,0:18:30.95:0,31,130	0/0:4,0:4:8.96:0,9,82	0/0:22,0:23:44.21:0,44,314	0/0:13,0:13:29.30:0,29,203	0/0:8,0:8:7.97:0,8,37	0/0:6,0:6:14.80:0,15,53	0/1:6,0:6:5.84:6,0,12	0/0:11,0:11:11.97:0,12,110	0/0:5,0:5:7.55:0,8,28	0/0:16,0:11:20.63:0,21,78	0/0:19,0:16:11.82:0,12,80	1/1:10,0:10:18.04:194,18,0	1/1:6,13:19:38.60:419,39,0	1/1:3,5:7:6.02:69,6,0	0/0:8,0:8:14.84:0,15,54	0/0:7,0:7:0.84:0,1,26	0/0:5,0:5:4.19:0,4,14	0/0:13,0:12:25.38:0,25,97	0/1:7,0:7:5.21:5,0,10	1/1:14,8:22:36.49:378,36,0	0/0:6,0:6:10.22:0,10,40
chr10	31172831	.	TTTTTTTTG	T	913.55	PASS	AB=0.981;AC=20;AF=0.357;AN=56;BaseQRankSum=1.430;DP=369;FS=13.026;HRun=0;HaplotypeScore=136.7243;InbreedingCoeff=-0.3983;MQ=63.97;MQ0=13;MQRankSum=0.498;QD=3.46;ReadPosRankSum=4.089;VQSLOD=1.8787;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:10,0:6:2.90:5,0,3	0/1:6,0:6:18.80:19,0,38	0/0:37,0:16:1.82:0,2,295	0/1:34,0:9:0.34:0,0,88	0/1:28,0:28:61.38:61,0,168	0/1:6,0:6:10.76:11,0,20	0/0:9,0:9:0.84:0,1,44	0/0:18,0:18:21.83:0,22,144	0/0:5,0:5:12.04:0,12,439	0/1:24,0:24:99:142,0,511	0/0:13,0:13:30.08:0,30,487	0/1:8,0:8:27.31:27,0,41	0/1:6,0:6:2.92:3,0,97	0/0:6,0:6:7.29:0,7,29	0/0:12,0:12:21.06:0,21,466	0/0:5,0:5:7.38:0,7,26	0/1:16,0:11:6.97:7,0,93	0/1:19,0:16:47.75:48,0,106	0/1:4,6:9:99:238,0,112	0/1:19,0:19:99:148,0,514	0/1:9,0:7:17.46:90,0,17	0/1:8,0:8:12.88:24,0,13	0/1:7,0:7:1.74:2,0,12	0/1:5,0:5:1.42:12,0,1	0/1:14,0:13:35.02:35,0,58	0/1:7,0:7:7.74:17,0,8	0/1:22,0:22:99:146,0,560	0/1:6,0:6:3.37:22,0,3
chr10	31172847	.	TG	T	3695.57	PASS	AB=1.000;AC=42;AF=0.750;AN=56;BaseQRankSum=3.150;DP=452;FS=3.277;HRun=1;HaplotypeScore=101.8955;InbreedingCoeff=0.6195;MQ=45.57;MQ0=41;MQRankSum=-4.385;QD=12.12;ReadPosRankSum=-0.679;VQSLOD=2.0065;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:11:22.68:133,23,0	1/1:6,0:5:13.23:70,13,0	0/0:39,2:14:1.29:0,1,127	0/0:32,1:4:6.88:0,7,55	1/1:29,0:29:78.15:505,78,0	1/1:8,1:9:20.90:162,21,0	1/1:11,0:9:13.97:79,14,0	1/1:17,0:15:26.60:194,27,0	0/1:11,0:9:27.32:27,0,108	1/1:15,5:18:29.01:304,29,0	1/1:1,9:9:23.99:281,24,0	1/1:11,1:12:20.08:144,20,0	1/1:10,0:10:23.28:124,23,0	1/1:9,0:8:14.52:85,15,0	0/0:14,0:13:0.56:0,1,168	1/1:5,0:5:1.31:46,1,0	1/1:31,0:26:47.34:314,47,0	1/1:27,0:20:47.30:330,47,0	0/0:19,0:13:25.73:0,26,230	0/0:19,0:18:33.90:0,34,456	0/1:10,0:6:25.82:26,0,42	1/1:10,0:8:21.97:162,22,0	1/1:13,0:12:21.89:122,22,0	1/1:11,0:9:7.88:40,8,0	1/1:19,0:18:44.54:296,45,0	1/1:13,0:12:17.80:157,18,0	0/0:20,0:20:11.69:0,12,348	1/1:4,0:4:11.94:94,12,0
chr10	31172853	.	TTTGG	T	5287.14	PASS	AB=1.000;AC=40;AF=0.714;AN=56;BaseQRankSum=1.920;DP=476;FS=3.256;HRun=0;HaplotypeScore=108.1698;InbreedingCoeff=0.5076;MQ=36.94;MQ0=54;MQRankSum=-1.509;QD=13.99;ReadPosRankSum=-0.462;VQSLOD=4.0715;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:11:23.88:252,24,0	1/1:8,0:7:11.56:91,12,0	0/1:35,0:9:1.62:2,0,18	0/0:31,0:3:2.37:0,2,8	1/1:31,1:30:76.06:833,76,0	0/1:10,0:10:2.98:206,0,3	1/1:12,0:9:14.52:129,15,0	1/1:18,0:14:26.11:349,26,0	0/1:11,0:9:14.26:14,0,255	0/1:21,0:19:23.24:23,0,220	0/0:12,0:11:15.72:0,16,89	1/1:12,0:10:17.39:190,17,0	1/1:10,0:10:23.28:245,23,0	1/1:11,0:10:16.55:194,17,0	0/0:14,0:13:20.35:0,20,257	1/1:7,0:5:14.61:126,15,0	1/1:32,0:27:49.83:491,50,0	1/1:29,0:20:49.43:540,49,0	0/0:20,0:13:15.02:0,15,190	0/0:21,0:20:50.28:0,50,704	0/1:14,0:7:34.98:55,0,35	1/1:11,0:9:26.65:259,27,0	1/1:13,0:12:24.43:272,24,0	1/1:11,0:9:8.82:85,9,0	1/1:19,0:18:47.45:494,47,0	1/1:8,5:12:31.58:313,32,0	0/1:25,0:23:3.51:4,0,510	1/1:5,0:4:11.88:121,12,0
chr10	31172854	.	TTGG	T	5717.66	PASS	AB=1.000;AC=41;AF=0.732;AN=56;BaseQRankSum=1.769;DP=469;FS=1.784;HRun=0;HaplotypeScore=97.4430;InbreedingCoeff=0.5512;MQ=34.73;MQ0=59;MQRankSum=-2.855;QD=15.29;ReadPosRankSum=-0.218;VQSLOD=4.2818;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:11:23.92:269,24,0	1/1:8,0:7:11.81:111,12,0	0/1:32,0:7:1.85:2,0,18	0/0:29,0:3:2.37:0,2,8	1/1:30,1:29:76.85:901,77,0	1/1:11,0:10:7:256,7,0	1/1:12,0:9:14.25:125,14,0	1/1:14,2:12:25.66:372,26,0	0/1:12,0:9:16.83:17,0,211	0/1:19,0:17:4.87:5,0,218	0/0:12,0:11:15.72:0,16,89	1/1:12,0:10:17.54:211,18,0	1/1:11,0:10:23.44:235,23,0	1/1:11,0:10:17.13:211,17,0	0/0:13,0:12:20.54:0,21,232	1/1:8,0:5:14.70:138,15,0	1/1:31,0:26:49.95:527,50,0	1/1:29,0:20:49.47:552,49,0	0/0:20,0:12:11.72:0,12,185	0/0:21,0:20:47.76:0,48,633	0/1:15,0:7:32.46:62,0,32	1/1:11,0:9:26.79:308,27,0	1/1:13,0:12:24.92:273,25,0	1/1:6,5:9:8.94:103,9,0	1/1:19,0:18:47.82:543,48,0	1/1:12,1:12:32.20:358,32,0	0/1:25,0:23:5.90:6,0,441	1/1:5,0:4:11.99:134,12,0
chr10	31172855	.	TGG	T	5848.55	PASS	AB=0.900;AC=39;AF=0.696;AN=56;BaseQRankSum=1.808;DP=463;FS=0.534;HRun=2;HaplotypeScore=87.5000;InbreedingCoeff=0.5564;MQ=34.34;MQ0=65;MQRankSum=-2.292;QD=16.90;ReadPosRankSum=0.251;VQSLOD=2.1430;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:13,6:10:23.99:271,24,0	1/1:5,2:6:11.92:120,12,0	0/1:28,0:5:1.71:2,0,18	0/0:29,0:3:2.37:0,2,8	1/1:12,18:28:76.47:951,76,0	0/1:6,4:9:7.38:247,0,7	1/1:5,7:9:14.54:139,15,0	1/1:7,9:12:25.66:351,26,0	0/1:11,1:9:23.83:24,0,170	0/0:20,0:18:16.22:0,16,272	0/0:13,0:11:15.72:0,16,89	1/1:5,7:10:17.92:212,18,0	1/1:5,5:9:23.75:234,24,0	1/1:2,8:9:17.18:197,17,0	0/0:13,0:12:20.47:0,20,207	1/1:5,3:5:14.87:145,15,0	1/1:13,18:26:50.93:552,51,0	1/1:21,8:19:49.52:545,50,0	0/0:21,0:12:11.10:0,11,175	0/0:21,0:20:37.49:0,37,548	0/1:14,1:6:32.19:67,0,32	1/1:8,3:9:26.73:314,27,0	1/1:3,10:12:24.95:283,25,0	1/1:10,1:9:9.02:102,9,0	1/1:6,13:18:47.85:560,48,0	1/1:9,4:12:32.29:360,32,0	0/1:22,2:22:26.15:26,0,352	1/1:4,2:4:12.03:147,12,0
chr10	31173535	.	ATATATCTATATCTATATC	A	7623.98	PASS	AB=1.000;AC=26;AF=0.481;AN=54;BaseQRankSum=-0.157;DP=519;FS=2.646;HRun=0;HaplotypeScore=247.9969;InbreedingCoeff=0.1943;MQ=62.71;MQ0=1;MQRankSum=0.535;QD=22.10;ReadPosRankSum=3.369;VQSLOD=3.8309;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:32,0:32:14.43:663,14,0	1/1:6,0:6:5.89:37,6,0	0/0:11,0:8:2.74:0,3,12	./.	0/1:30,0:30:44.87:580,0,45	1/1:13,0:13:21.02:337,21,0	1/1:14,0:14:17.99:305,18,0	1/1:13,23:36:67.30:932,67,0	0/0:17,0:17:30.07:0,30,912	0/0:26,0:26:48:0,48,521	0/0:14,0:14:32.97:0,33,283	1/1:16,0:16:19.55:332,20,0	0/1:23,0:23:41.95:607,0,42	1/1:19,0:19:15.30:605,15,0	0/0:12,0:12:21.06:0,21,474	0/1:24,0:24:99:408,0,126	0/1:22,0:22:11.15:464,0,11	0/1:19,0:18:12.60:412,0,13	0/0:20,0:19:24.06:0,24,591	0/0:24,0:24:48.12:0,48,1558	0/0:19,0:19:33.06:0,33,944	1/1:5,0:5:2.98:21,3,0	0/1:19,0:19:33.05:308,0,33	0/1:10,0:10:65.35:157,0,65	0/1:15,0:15:44.21:248,0,44	0/1:30,0:30:99:896,0,101	0/0:28,0:28:60.15:0,60,1716	0/1:12,0:12:99:314,0,106
chr10	31173674	.	GTA	G	8778.80	PASS	AB=0.795;AC=36;AF=0.643;AN=56;BaseQRankSum=3.788;DP=557;FS=0.000;HRun=0;HaplotypeScore=109.2334;InbreedingCoeff=0.7986;MQ=70.98;MQ0=0;MQRankSum=-0.800;QD=23.10;ReadPosRankSum=0.014;VQSLOD=4.8430;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,22:28:41.97:506,42,0	1/1:0,9:9:15.05:189,15,0	0/0:5,0:5:2.50:0,2,9	0/1:19,0:16:6.21:6,0,30	1/1:5,30:35:33.03:901,33,0	1/1:2,18:20:39.12:492,39,0	1/1:1,7:8:6.02:76,6,0	1/1:12,21:33:63.05:746,63,0	0/0:11,0:11:21.07:0,21,344	0/0:6,0:31:81.07:0,81,784	0/0:10,0:31:63.02:0,63,574	1/1:2,9:11:18.06:227,18,0	1/1:1,24:25:45.14:568,45,0	1/1:1,13:15:27.09:341,27,0	0/0:15,0:15:42.11:0,42,647	0/1:4,9:13:28.81:206,0,29	1/1:3,14:17:29.74:375,30,0	1/1:3,12:15:33.08:400,33,0	0/0:17,0:17:33.08:0,33,495	0/0:26,0:26:50.47:0,50,1168	0/0:12,0:12:33.10:0,33,516	1/1:2,18:20:42.11:530,42,0	1/1:2,24:26:56.89:718,57,0	1/1:3,3:6:6.02:76,6,0	1/1:1,25:27:69.05:847,69,0	1/1:6,26:33:54.52:894,55,0	0/0:29,0:29:75.17:0,75,1138	1/1:1,19:20:54.17:681,54,0
chr10	31173756	.	T	TAC	1547.45	PASS	AB=0.817;AC=16;AF=0.286;AN=56;BaseQRankSum=9.159;DP=572;FS=15.667;HRun=0;HaplotypeScore=197.8003;InbreedingCoeff=-0.2884;MQ=48.83;MQ0=5;MQRankSum=-5.209;QD=4.62;ReadPosRankSum=-4.860;VQSLOD=0.8303;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:24,2:26:10.62:11,0,16	0/1:12,4:16:2.91:57,0,3	0/0:6,0:3:6.01:0,6,65	0/0:25,0:8:17.47:0,17,174	0/0:23,7:30:4.82:0,5,62	0/1:15,6:21:26.80:27,0,34	0/0:11,0:11:8.92:0,9,69	0/0:51,0:48:8.67:0,9,522	0/0:7,0:7:21.05:0,21,299	0/1:14,11:25:31.84:414,0,32	0/1:16,13:29:65.11:514,0,65	0/1:18,6:24:9.34:49,0,9	0/1:18,7:25:41:105,0,41	0/1:14,4:18:0.68:69,0,1	0/0:9,0:9:24.08:0,24,365	0/1:11,5:16:54.43:108,0,54	0/0:16,0:15:16.76:0,17,109	0/1:6,2:8:17.57:18,0,66	0/0:20,0:18:54.11:0,54,757	0/0:23,0:23:63.14:0,63,875	0/0:12,0:12:33.10:0,33,483	0/1:17,4:21:38.06:67,0,38	0/1:17,5:22:48.61:70,0,49	0/1:8,2:10:10.48:18,0,10	0/1:29,6:35:40.13:64,0,40	0/1:25,4:29:99:103,0,266	0/0:26,0:26:72.18:0,72,1010	0/1:10,0:9:10.04:10,0,77
chr10	31173758	.	T	TACATACATAC	5889.85	PASS	AB=0.856;AC=28;AF=0.500;AN=56;BaseQRankSum=1.726;DP=571;FS=0.423;HRun=0;HaplotypeScore=233.9921;InbreedingCoeff=0.0955;MQ=50.19;MQ0=3;MQRankSum=-1.169;QD=13.33;ReadPosRankSum=-1.405;VQSLOD=3.6516;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:24,2:26:10.69:151,11,0	0/1:12,4:16:14.60:74,0,15	0/0:6,0:3:6.02:0,6,108	0/0:25,0:9:16.57:0,17,235	1/1:24,7:31:6.31:286,6,0	0/1:13,6:19:5.31:65,0,5	1/1:11,0:11:8.80:90,9,0	0/1:51,0:48:99:1025,0,156	0/0:7,0:7:21.06:0,21,578	1/1:13,0:24:6.63:498,7,0	0/1:16,0:29:38.76:453,0,39	0/1:18,6:24:13.57:127,0,14	1/1:19,8:27:9.72:454,10,0	1/1:14,4:18:9:106,9,0	0/0:9,0:9:24.08:0,24,696	1/1:11,5:16:10.71:519,11,0	0/1:16,0:15:48.36:104,0,48	1/1:6,2:8:18.06:466,18,0	0/0:18,0:18:54.17:0,54,1550	0/0:23,0:23:60.16:0,60,1596	0/0:12,0:12:33.10:0,33,869	0/1:17,4:21:57.27:75,0,57	0/1:17,5:22:34.93:140,0,35	0/1:8,2:10:8.78:18,0,9	0/1:29,6:35:36.76:37,0,50	0/1:24,4:28:80.47:1177,0,80	0/0:29,0:29:75.21:0,75,2090	0/1:10,0:9:24.29:24,0,42
chr10	31174586	.	TCTTC	T	4316.02	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=9.370;DP=676;FS=1.448;HRun=0;HaplotypeScore=118.1065;InbreedingCoeff=0.9994;MQ=80.42;MQ0=0;MQRankSum=-2.095;QD=44.50;ReadPosRankSum=5.088;VQSLOD=5.1329;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,126,3356	0/0:16,0:16:48.16:0,48,1258	0/0:24,0:24:69.24:0,69,1646	0/0:34,0:35:80.94:0,81,1899	0/0:20,0:20:60.19:0,60,1542	0/0:11,0:11:27.09:0,27,696	0/0:19,0:19:57.15:0,57,1457	0/0:25,0:25:72.22:0,72,1828	0/0:22,0:22:66.23:0,66,1778	0/0:31,0:31:84.29:0,84,2232	0/0:25,0:25:75.26:0,75,1977	1/1:1,21:22:60.20:1110,60,0	1/1:0,24:24:69.24:1310,69,0	0/0:26,0:26:75.26:0,75,2005	0/0:26,0:26:78.27:0,78,2026	0/0:15,0:15:39.13:0,39,1052	0/0:29,0:29:78.27:0,78,2067	0/0:16,0:16:48.16:0,48,1241	0/0:26,0:26:72.25:0,72,1874	0/0:28,0:28:75.26:0,75,2013	0/0:26,0:26:69.24:0,69,1851	0/0:18,0:18:48.16:0,48,1266	1/1:0,27:27:53.79:987,54,0	1/1:2,22:24:48.11:909,48,0	0/0:23,0:23:69.24:0,69,1839	0/0:39,0:39:99:0,117,3004	0/0:24,0:24:72.25:0,72,1913	0/0:9,0:9:27.09:0,27,717
chr10	31175180	.	T	TA	6786.61	PASS	AB=0.554;AC=34;AF=0.607;AN=56;BaseQRankSum=-3.903;DP=540;FS=5.842;HRun=10;HaplotypeScore=65.9261;InbreedingCoeff=0.7901;MQ=77.45;MQ0=0;MQRankSum=-2.469;QD=19.79;ReadPosRankSum=0.712;VQSLOD=5.7642;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,21:28:60.14:633,60,0	1/1:0,5:5:12.03:128,12,0	0/0:16,0:16:4.45:0,4,102	0/0:14,0:14:14.09:0,14,183	1/1:10,20:31:12.97:564,13,0	1/1:3,14:18:29.91:302,30,0	1/1:0,18:18:45.11:480,45,0	1/1:9,22:32:59.95:606,60,0	0/0:16,0:17:40.98:0,41,326	0/0:18,0:18:38.92:0,39,320	0/0:29,1:30:33.87:0,34,482	1/1:4,8:12:15.04:160,15,0	1/1:7,11:18:8.44:295,8,0	1/1:1,17:18:33.08:351,33,0	0/0:16,0:16:44.84:0,45,356	0/1:5,12:17:31.36:310,0,31	1/1:6,20:27:7.58:461,8,0	1/1:2,6:8:18.05:192,18,0	0/0:19,0:22:45.03:0,45,336	0/0:24,2:26:33.90:0,34,483	0/0:15,0:15:35.95:0,36,296	1/1:5,11:16:27.07:288,27,0	1/1:3,22:25:32.49:551,32,0	1/1:1,12:13:14.01:330,14,0	1/1:3,16:19:17.54:391,18,0	1/1:6,20:26:0.33:563,0,0	0/0:23,0:23:56.91:0,57,465	0/1:1,11:12:0.75:181,0,1
chr10	31175782	.	TG	T	3782.26	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=2.368;DP=448;FS=9.175;HRun=11;HaplotypeScore=60.9308;InbreedingCoeff=0.7224;MQ=48.34;MQ0=33;MQRankSum=-0.769;QD=9.55;ReadPosRankSum=2.912;VQSLOD=1.8865;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:23,22:44:65.56:509,66,0	1/1:1,2:2:5.99:49,6,0	0/0:17,0:2:0:0,0,0	0/0:16,0:3:6.32:0,6,43	1/1:8,7:12:23.96:197,24,0	1/1:9,13:21:31.99:252,32,0	1/1:7,10:18:23:178,23,0	1/1:11,6:16:10.03:61,10,0	0/0:13,0:13:5.92:0,6,53	1/1:5,0:19:30.23:89,30,0	1/1:3,0:10:12.22:36,12,0	1/1:8,9:16:26.95:221,27,0	1/1:1,2:3:8.03:55,8,0	1/1:9,7:15:13.99:104,14,0	0/0:6,0:6:8.97:0,9,77	1/1:4,6:8:17.98:148,18,0	1/1:12,8:22:29.09:196,29,0	1/1:11,12:21:35.69:295,36,0	1/1:13,7:15:11.95:98,12,0	1/1:9,4:14:16.98:124,17,0	1/1:19,8:26:27.41:219,27,0	1/1:5,9:15:28.76:227,29,0	1/1:5,4:11:16.06:110,16,0	1/1:4,5:10:14.02:104,14,0	1/1:2,3:5:8.99:74,9,0	1/1:13,9:21:26.94:221,27,0	1/1:6,9:16:22.03:159,22,0	1/1:5,2:5:8.02:55,8,0
chr10	31175808	.	ATTG	A	1150.52	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.509;DP=436;FS=19.979;HRun=0;HaplotypeScore=76.8744;InbreedingCoeff=0.8692;MQ=54.62;MQ0=15;MQRankSum=-5.933;QD=35.95;ReadPosRankSum=1.630;VQSLOD=2.4633;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,111,2334	0/0:5,0:4:12.04:0,12,265	0/0:17,0:4:12.01:0,12,204	0/0:13,0:4:3.01:0,3,66	0/0:14,0:14:39.13:0,39,860	0/0:22,0:20:54.19:0,54,1155	0/0:18,0:18:45.12:0,45,889	0/0:14,0:13:33.08:0,33,656	0/0:9,0:9:24.01:0,24,481	1/1:3,18:21:54.16:839,54,0	1/1:0,11:11:27.09:432,27,0	0/0:16,0:15:36.12:0,36,792	0/0:6,0:6:18.06:0,18,397	0/0:16,0:15:36.12:0,36,776	0/0:7,0:7:18.06:0,18,397	0/0:12,0:11:30.09:0,30,586	0/0:20,1:21:14.63:0,15,1209	0/0:26,0:24:72.21:0,72,1540	0/0:15,0:12:30.10:0,30,662	0/0:19,0:19:51.18:0,51,1121	0/0:27,0:26:75.26:0,75,1622	0/0:21,0:20:57.20:0,57,1249	0/0:8,0:8:24.08:0,24,510	0/0:11,0:11:30.10:0,30,661	0/0:6,0:6:18.06:0,18,397	0/0:12,0:12:36.12:0,36,781	0/0:13,0:13:33.10:0,33,682	0/0:14,0:13:33.11:0,33,728
chr10	31177653	.	G	GA	1082.88	PASS	AB=0.950;AC=6;AF=0.107;AN=56;BaseQRankSum=-5.458;DP=648;FS=3.264;HRun=10;HaplotypeScore=66.0683;InbreedingCoeff=0.6600;MQ=72.12;MQ0=1;MQRankSum=0.307;QD=11.90;ReadPosRankSum=-1.740;VQSLOD=2.9660;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:75.19:0,75,636	0/1:8,1:9:8.02:8,0,148	0/1:24,0:20:6.12:6,0,112	0/0:22,0:18:24.67:0,25,164	0/0:43,0:43:99:0,117,960	0/0:30,0:30:64.04:0,64,559	0/0:10,0:10:23.97:0,24,197	0/0:31,1:32:42.90:0,43,556	0/0:16,0:17:43.97:0,44,350	1/1:6,24:30:25.90:686,26,0	1/1:3,21:26:53.72:513,54,0	0/0:15,0:15:32.94:0,33,268	0/0:15,0:15:41.95:0,42,345	0/0:17,0:17:50.92:0,51,415	0/0:23,0:23:53.88:0,54,443	0/0:24,0:24:59.91:0,60,492	0/0:28,1:29:41.83:0,42,530	0/0:12,0:12:26.93:0,27,221	0/0:27,1:28:45.89:0,46,579	0/0:29,0:29:71.85:0,72,582	0/0:8,0:8:11.95:0,12,99	0/0:19,0:19:47.91:0,48,392	0/0:21,0:21:53.92:0,54,443	0/0:10,0:12:18.52:0,19,134	0/0:32,1:37:69.03:0,69,730	0/0:27,0:27:42.91:0,43,520	0/0:22,0:23:52.93:0,53,421	0/0:28,1:29:45.92:0,46,584
chr10	31178286	.	CT	C	1734.27	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-9.360;DP=446;FS=0.478;HRun=9;HaplotypeScore=77.6466;InbreedingCoeff=0.8821;MQ=74.15;MQ0=0;MQRankSum=-1.480;QD=20.89;ReadPosRankSum=0.766;VQSLOD=4.1478;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:24:57.53:0,58,303	0/0:0,0:6:17.16:0,17,91	0/0:10,0:10:1:0,1,151	0/0:5,0:6:9.01:0,9,88	0/0:3,0:27:74.28:0,74,403	0/0:4,0:29:65.47:0,65,338	0/0:4,0:18:28.88:0,29,145	0/0:3,0:24:62.61:0,63,337	0/0:14,0:14:39.10:0,39,440	0/0:3,0:19:51.86:0,52,304	0/0:5,0:19:52.18:0,52,344	0/0:1,0:5:11.27:0,11,56	0/0:1,0:12:31.28:0,31,179	0/0:2,0:10:19.89:0,20,101	0/0:11,0:11:30.09:0,30,346	0/0:1,0:8:17.04:0,17,87	0/0:2,0:11:28.72:0,29,172	0/0:2,0:8:14.20:0,14,72	1/1:4,16:20:48.01:436,48,0	1/1:1,25:26:74.87:659,75,0	1/1:0,6:6:12.01:110,12,0	0/0:1,0:12:26.04:0,26,131	0/0:1,0:16:31.25:0,31,159	0/0:1,0:7:17.04:0,17,87	0/0:1,0:31:59.66:0,60,303	0/0:3,0:28:74.34:0,74,404	1/1:3,28:31:75.03:686,75,0	0/0:8,0:8:10.86:0,11,62
chr10	31178838	.	CT	C	274.01	PASS	AB=0.875;AC=7;AF=0.125;AN=56;BaseQRankSum=4.051;DP=453;FS=3.562;HRun=12;HaplotypeScore=46.5164;InbreedingCoeff=0.5014;MQ=59.43;MQ0=1;MQRankSum=-0.889;QD=5.07;ReadPosRankSum=-1.620;VQSLOD=0.8216;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,1:38:78.79:0,79,959	0/0:7,0:8:17.83:0,18,156	0/0:5,0:1:0:0,0,0	0/0:7,0:6:14.90:0,15,112	0/0:13,0:14:30.01:0,30,288	0/0:22,2:24:30.75:0,31,469	0/0:15,0:15:42.05:0,42,411	0/0:29,0:29:44.28:0,44,416	0/1:11,3:14:13.38:13,0,241	1/1:6,14:20:38.44:282,38,0	1/1:1,5:6:11.95:93,12,0	0/0:15,0:15:32.94:0,33,309	0/0:17,0:17:45.09:0,45,455	0/0:14,0:14:16.85:0,17,333	0/0:18,0:18:36.03:0,36,355	0/0:19,1:20:21.73:0,22,370	0/0:19,0:19:39.06:0,39,388	0/0:12,1:13:6.79:0,7,234	0/0:27,2:29:30.81:0,31,465	0/1:8,0:10:5.32:5,0,118	0/0:14,0:18:50.42:0,50,441	0/0:11,0:11:15.03:0,15,152	0/1:3,1:4:13.94:14,0,51	0/0:10,0:11:26.89:0,27,258	0/0:8,0:9:23.88:0,24,227	0/0:26,2:29:19.45:0,19,531	0/0:29,0:29:60.12:0,60,608	0/0:6,0:6:18.04:0,18,183
chr10	31179010	.	CT	C	3721.41	PASS	AB=0.769;AC=36;AF=0.643;AN=56;BaseQRankSum=0.453;DP=346;FS=1.481;HRun=10;HaplotypeScore=94.5527;InbreedingCoeff=0.8484;MQ=69.93;MQ0=3;MQRankSum=-1.549;QD=17.47;ReadPosRankSum=1.471;VQSLOD=4.0469;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,15:16:38.98:338,39,0	1/1:1,6:7:17.99:156,18,0	0/1:17,0:9:4.58:5,0,101	0/0:16,0:10:7.09:0,7,57	1/1:2,15:17:29.99:260,30,0	1/1:0,6:6:18:156,18,0	1/1:2,7:9:20.99:182,21,0	1/1:10,13:23:24.25:300,24,0	0/0:13,0:13:33.08:0,33,357	0/0:5,0:8:14.51:0,15,84	0/0:2,0:10:22.73:0,23,113	1/1:1,5:6:14.99:130,15,0	1/1:1,11:12:29.99:260,30,0	1/1:3,8:11:20.98:182,21,0	0/0:14,0:14:39.11:0,39,431	1/1:0,9:9:26.99:234,27,0	1/1:0,11:11:29.99:260,30,0	0/1:1,6:7:3.74:112,0,4	0/0:18,1:19:18.92:0,19,412	0/0:23,0:23:57.11:0,57,622	0/0:16,0:16:36.04:0,36,375	1/1:2,7:9:11.99:104,12,0	1/1:5,11:16:26.99:234,27,0	1/1:2,8:10:23.99:208,24,0	1/1:1,10:11:26.99:234,27,0	1/1:1,11:12:32.99:286,33,0	0/0:14,0:13:16.64:0,17,376	1/1:1,3:4:9:78,9,0
chr10	31179050	.	AT	A	4663.37	PASS	AC=52;AF=1.000;AN=52;BaseQRankSum=0.346;DP=246;FS=0.000;HRun=4;HaplotypeScore=126.4563;InbreedingCoeff=-0.0414;MQ=26.73;MQ0=57;MQRankSum=0.654;QD=20.01;ReadPosRankSum=0.911;VQSLOD=3.6885;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,8:11:17.34:208,17,0	1/1:0,1:1:3.01:35,3,0	./.	./.	1/1:3,6:6:15.04:175,15,0	1/1:3,6:8:18.05:210,18,0	1/1:2,7:5:12.04:141,12,0	1/1:2,11:5:15.04:175,15,0	1/1:3,8:9:21.06:245,21,0	1/1:3,7:7:18.05:210,18,0	1/1:5,4:6:6.02:70,6,0	1/1:3,6:6:18.05:210,18,0	1/1:3,7:8:21.06:245,21,0	1/1:2,8:9:24.07:279,24,0	1/1:4,9:11:24.07:279,24,0	1/1:2,7:8:18.05:210,18,0	1/1:3,5:8:18.05:208,18,0	1/1:1,1:2:3.01:35,3,0	1/1:5,7:10:21.02:230,21,0	1/1:2,9:10:27.08:310,27,0	1/1:3,3:3:9.03:106,9,0	1/1:3,3:4:9.03:105,9,0	1/1:5,4:5:9.03:105,9,0	1/1:4,1:2:3.01:35,3,0	1/1:3,8:9:24.07:280,24,0	1/1:6,11:12:33.10:385,33,0	1/1:5,4:7:9.03:105,9,0	1/1:0,2:2:6.02:70,6,0
chr10	31179072	.	C	CCTGG	8991	PASS	AC=52;AF=1.000;AN=52;DP=224;FS=0.000;HRun=0;HaplotypeScore=98.8899;InbreedingCoeff=-0.0526;MQ=20.43;MQ0=101;QD=42.21;VQSLOD=5.0227;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,5:5:12.04:346,12,0	1/1:0,1:1:3.01:87,3,0	./.	./.	1/1:5,4:4:12.04:342,12,0	1/1:1,5:5:15.05:433,15,0	1/1:5,6:4:9.03:260,9,0	1/1:11,11:7:15.05:385,15,0	1/1:3,5:5:12.04:346,12,0	1/1:5,7:7:18.06:520,18,0	1/1:4,2:2:6.02:173,6,0	1/1:6,5:6:18.06:513,18,0	1/1:3,4:4:12.04:346,12,0	1/1:6,6:6:18.06:518,18,0	1/1:2,6:6:18.06:519,18,0	1/1:3,3:3:6.02:173,6,0	1/1:1,3:3:9.03:260,9,0	1/1:2,2:3:6.02:173,6,0	1/1:1,6:6:18.06:520,18,0	1/1:3,5:5:15.05:423,15,0	1/1:6,4:5:15.05:417,15,0	1/1:6,4:4:12.04:346,12,0	1/1:4,2:2:6.02:173,6,0	1/1:5,2:2:6.02:159,6,0	1/1:3,6:6:18.06:519,18,0	1/1:5,9:9:27.09:780,27,0	1/1:4,2:2:6.02:173,6,0	1/1:0,1:1:3.01:87,3,0
chr10	31179099	.	CTCCA	C	3638.99	PASS	AC=48;AF=1.000;AN=48;DP=207;FS=0.000;HRun=0;HaplotypeScore=75.5608;InbreedingCoeff=-0.1044;MQ=16.09;MQ0=141;QD=20.91;VQSLOD=3.2499;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,2:2:6.02:125,6,0	1/1:1,1:1:3.01:63,3,0	./.	./.	1/1:6,1:1:3.01:63,3,0	1/1:1,3:3:9.03:188,9,0	1/1:4,2:2:6.02:125,6,0	1/1:7,5:5:12.04:251,12,0	1/1:3,3:3:6.02:125,6,0	1/1:5,6:6:18.06:376,18,0	./.	1/1:7,4:4:12.04:245,12,0	1/1:4,1:1:3.01:63,3,0	1/1:7,4:4:12.04:251,12,0	1/1:4,1:1:3.01:63,3,0	1/1:4,2:2:6.02:125,6,0	1/1:1,2:2:2.97:20,3,0	1/1:3,0:2:3.01:52,3,0	1/1:1,4:4:12.04:251,12,0	1/1:5,3:3:9.03:188,9,0	1/1:10,4:4:12.04:250,12,0	1/1:6,3:3:6.02:125,6,0	1/1:6,1:1:3.01:63,3,0	1/1:7,2:2:3.01:63,3,0	1/1:5,4:4:12.04:251,12,0	1/1:5,4:4:12.04:251,12,0	1/1:6,1:1:3.01:63,3,0	./.
chr10	31179116	.	TG	T	724.85	PASS	AC=32;AF=1.000;AN=32;DP=185;FS=0.000;HRun=1;HaplotypeScore=52.4246;InbreedingCoeff=-0.1557;MQ=11.12;MQ0=157;QD=6.25;VQSLOD=0.4843;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,2:2:6.02:70,6,0	1/1:1,1:1:3.01:35,3,0	./.	./.	./.	1/1:1,1:1:3.01:34,3,0	./.	./.	1/1:4,1:1:3.01:35,3,0	1/1:5,2:2:6.02:69,6,0	./.	1/1:7,2:2:6.02:71,6,0	1/1:4,1:1:3.01:35,3,0	1/1:8,2:2:6.02:71,6,0	1/1:5,1:1:3.01:34,3,0	1/1:7,2:2:6.02:71,6,0	./.	./.	1/1:2,1:1:3.01:35,3,0	./.	1/1:16,2:2:3.01:35,3,0	1/1:8,1:1:3.01:35,3,0	./.	./.	1/1:6,4:4:11.96:111,12,0	1/1:4,1:1:3.01:35,3,0	1/1:8,1:1:2.97:20,3,0	./.
chr10	31179148	.	TC	T	360.02	PASS	AC=20;AF=1.000;AN=20;DP=181;FS=0.000;HRun=1;HaplotypeScore=9.2787;InbreedingCoeff=-0.1794;MQ=8.12;MQ0=160;QD=6.10;VQSLOD=0.4926;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,1:1:3.01:38,3,0	./.	./.	./.	./.	./.	1/1:2,1:1:3.01:38,3,0	./.	./.	./.	./.	./.	1/1:5,1:1:3.01:38,3,0	./.	1/1:4,1:1:3.01:38,3,0	./.	1/1:6,0:1:2.97:20,3,0	./.	1/1:1,4:4:9.03:108,9,0	./.	./.	1/1:7,2:1:3.01:39,3,0	1/1:3,1:1:3.01:38,3,0	./.	1/1:5,1:1:3.01:36,3,0	./.	1/1:8,1:1:3.01:38,3,0	./.
chr10	31184665	.	TTTCC	T	2285.13	PASS	AB=0.852;AC=31;AF=0.620;AN=50;BaseQRankSum=4.454;DP=606;FS=15.896;HRun=0;HaplotypeScore=103.9751;InbreedingCoeff=0.7079;MQ=65.56;MQ0=8;MQRankSum=1.449;QD=7.14;ReadPosRankSum=0.443;VQSLOD=1.5413;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:38,8:45:99:191,0,429	1/1:4,6:10:15.05:227,15,0	./.	./.	1/1:13,0:24:3.19:6,3,0	1/1:13,5:17:12.04:182,12,0	1/1:16,1:17:3.01:45,3,0	./.	0/0:17,0:16:18.06:0,18,416	0/0:29,0:29:18.06:0,18,402	0/0:16,0:15:21.06:0,21,421	1/1:7,7:14:12.04:182,12,0	1/1:14,7:20:12.04:175,12,0	1/1:16,3:19:12.04:182,12,0	0/0:21,0:28:23.60:0,24,333	1/1:9,7:16:6.49:92,6,0	1/1:14,8:22:18.06:272,18,0	1/1:12,4:16:9.03:136,9,0	0/0:25,0:24:24.08:0,24,421	0/0:19,0:19:12.04:0,12,216	0/0:53,0:53:12.03:0,12,178	1/1:12,5:18:18.01:229,18,0	1/1:12,0:21:3.43:29,3,0	1/1:21,8:29:27.07:387,27,0	1/1:14,2:16:6.02:91,6,0	0/0:29,0:29:31.35:0,31,679	0/0:6,0:6:2.99:0,3,24	1/1:11,2:12:3.01:45,3,0
chr10	31184992	.	A	AT	10204.88	PASS	AB=1.000;AC=38;AF=0.679;AN=56;BaseQRankSum=-12.271;DP=582;FS=5.605;HRun=9;HaplotypeScore=53.5798;InbreedingCoeff=0.8548;MQ=78.63;MQ0=0;MQRankSum=0.254;QD=24.18;ReadPosRankSum=0.062;VQSLOD=5.5945;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,27:33:46.09:716,46,0	1/1:1,6:8:20.89:213,21,0	0/1:12,0:12:5.12:5,0,111	0/1:17,0:18:40.33:40,0,87	1/1:3,29:32:29.07:764,29,0	1/1:2,19:21:48.13:531,48,0	1/1:3,20:23:57.15:631,57,0	1/1:6,26:32:75.17:810,75,0	0/0:17,0:17:47.97:0,48,413	0/0:32,0:32:71.96:0,72,625	0/0:22,0:22:53.98:0,54,469	1/1:4,17:21:45.12:498,45,0	1/1:1,13:14:39.11:432,39,0	1/1:2,14:16:42.11:465,42,0	0/0:11,0:11:32.99:0,33,286	1/1:4,19:23:31.10:571,31,0	1/1:3,22:25:60.16:664,60,0	1/1:1,13:14:33.09:365,33,0	0/0:16,0:16:35.97:0,36,308	0/0:21,0:22:49.98:0,50,419	0/0:14,0:14:41.99:0,42,365	1/1:5,15:21:50.92:526,51,0	1/1:0,26:26:75.19:822,75,0	1/1:2,10:12:27.07:299,27,0	1/1:4,22:27:63:672,63,0	1/1:4,31:35:67.19:968,67,0	0/0:26,0:24:71.97:0,72,621	1/1:1,7:9:20.89:213,21,0
chr10	31185345	.	GT	G	5866.82	PASS	AB=0.772;AC=36;AF=0.643;AN=56;BaseQRankSum=-3.717;DP=589;FS=3.333;HRun=11;HaplotypeScore=74.3209;InbreedingCoeff=0.7503;MQ=69.53;MQ0=4;MQRankSum=-2.156;QD=14.27;ReadPosRankSum=1.820;VQSLOD=5.4648;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,27:29:68.92:566,69,0	1/1:3,5:8:14.96:120,15,0	0/1:30,0:14:2.98:3,0,113	0/1:16,0:8:12.87:13,0,20	1/1:7,21:29:29.86:429,30,0	0/1:3,13:16:4.35:254,0,4	1/1:6,12:18:47.92:390,48,0	1/1:7,22:30:37.52:490,38,0	0/0:20,1:21:26.45:0,26,470	0/0:25,0:25:48.11:0,48,506	0/0:31,0:31:71.94:0,72,713	1/1:7,13:20:23.93:197,24,0	1/1:4,10:14:23.95:196,24,0	1/1:5,6:11:14.97:123,15,0	0/0:20,0:20:51.09:0,51,525	1/1:6,17:24:37.87:301,38,0	1/1:6,20:27:22.94:326,23,0	1/1:1,8:9:20.98:172,21,0	0/0:12,0:22:37.96:0,38,264	0/0:7,0:27:63.02:0,63,357	0/0:1,0:10:17.08:0,17,86	1/1:2,19:21:56.91:467,57,0	1/1:5,22:27:56.70:468,57,0	1/1:3,18:21:27.74:328,28,0	0/1:2,13:14:5.02:170,0,5	1/1:6,25:31:42.90:559,43,0	0/0:3,0:22:48.56:0,49,261	1/1:2,13:15:35.94:295,36,0
chr10	31185363	.	G	GT	675.69	PASS	AB=0.964;AC=9;AF=0.161;AN=56;BaseQRankSum=-4.900;DP=571;FS=2.093;HRun=11;HaplotypeScore=87.9399;InbreedingCoeff=0.4019;MQ=64.94;MQ0=4;MQRankSum=0.149;QD=4.28;ReadPosRankSum=-2.164;VQSLOD=1.0316;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:32:51.76:0,52,376	0/0:5,0:5:8.96:0,9,70	0/1:23,0:8:4.53:5,0,58	0/1:15,1:8:0.26:27,0,0	0/0:23,1:27:51.20:0,51,367	0/0:19,0:20:31.76:0,32,231	0/0:20,0:20:11.34:0,11,267	0/0:37,0:39:76.08:0,76,581	0/0:19,0:19:22.75:0,23,281	1/1:7,13:21:30.33:275,30,0	1/1:4,19:24:47.81:438,48,0	0/1:15,0:15:12.41:12,0,97	0/0:15,0:15:17.84:0,18,139	0/0:7,0:8:7.97:0,8,52	0/0:22,0:22:40.78:0,41,307	0/1:21,1:23:16.73:17,0,241	0/0:20,0:20:29.83:0,30,232	0/0:9,0:9:17.90:0,18,139	0/0:15,0:15:17.88:0,18,139	0/0:27,0:28:6.16:0,6,361	0/0:11,0:11:17.89:0,18,139	0/0:24,1:25:38.28:0,38,478	0/0:32,0:32:51.58:0,52,513	0/0:22,0:22:11.78:0,12,226	0/0:13,0:14:23.90:0,24,186	0/1:31,3:34:49.75:50,0,368	0/0:18,0:18:23.75:0,24,185	0/0:12,0:12:26.87:0,27,209
chr10	31185751	.	AT	A	4571.53	PASS	AB=0.583;AC=39;AF=0.696;AN=56;BaseQRankSum=4.893;DP=378;FS=1.655;HRun=11;HaplotypeScore=44.1766;InbreedingCoeff=0.8477;MQ=71.46;MQ0=7;MQRankSum=-1.179;QD=16.87;ReadPosRankSum=3.156;VQSLOD=5.5831;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,27:28:71.86:584,72,0	1/1:0,4:4:8.99:74,9,0	0/0:12,0:9:15.43:0,15,145	0/0:10,0:10:8.59:0,9,119	1/1:3,19:20:47.93:394,48,0	1/1:2,11:13:20.97:172,21,0	1/1:2,6:8:17.98:148,18,0	1/1:11,19:24:41.88:343,42,0	0/0:6,0:6:15:0,15,148	1/1:2,15:16:10.86:268,11,0	1/1:1,7:8:14.95:123,15,0	1/1:2,9:11:17.95:148,18,0	1/1:0,10:10:26.97:222,27,0	1/1:0,5:5:11.99:99,12,0	0/0:7,0:7:18.05:0,18,192	1/1:2,12:15:9.01:269,9,0	1/1:4,21:24:47.94:394,48,0	1/1:1,13:14:32.96:271,33,0	0/0:24,0:24:54.08:0,54,550	0/0:23,0:23:51.13:0,51,543	0/0:10,0:10:27.06:0,27,281	1/1:0,4:4:5.99:49,6,0	0/1:2,5:7:17.21:83,0,17	1/1:1,8:8:20.98:172,21,0	1/1:2,11:13:29.96:246,30,0	1/1:1,15:16:41.93:345,42,0	0/0:13,0:15:38.77:0,39,369	1/1:3,8:9:20.93:167,21,0
chr10	31188329	.	AT	A	5539.24	PASS	AB=0.738;AC=39;AF=0.696;AN=56;BaseQRankSum=6.117;DP=635;FS=7.190;HRun=14;HaplotypeScore=77.8434;InbreedingCoeff=0.5980;MQ=73.05;MQ0=1;MQRankSum=0.831;QD=11.54;ReadPosRankSum=3.180;VQSLOD=4.6443;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,18:26:40.95:337,41,0	1/1:1,10:12:0.95:142,1,0	0/0:19,0:14:1.17:0,1,67	0/1:12,0:11:13.56:14,0,25	1/1:5,18:25:57.49:382,57,0	0/1:8,10:18:20.02:170,0,20	0/1:7,20:28:22.01:294,0,22	1/1:11,27:39:70.13:471,70,0	0/0:17,0:17:41.71:0,42,359	1/1:5,2:29:50.82:172,51,0	1/1:2,0:25:38.79:115,39,0	1/1:7,19:27:49.38:326,49,0	1/1:3,24:28:45.28:441,45,0	1/1:0,0:15:26.48:76,26,0	0/0:25,2:29:24.50:0,24,470	1/1:9,15:24:6.61:196,7,0	1/1:4,22:28:63.54:423,64,0	1/1:3,19:22:30.80:361,31,0	0/0:19,2:24:9.99:0,10,341	0/0:16,3:19:3.85:0,4,311	0/0:9,1:11:3.88:0,4,166	1/1:8,18:27:46.32:311,46,0	1/1:4,14:18:41.64:287,42,0	1/1:2,17:20:21.79:286,22,0	1/1:5,14:19:35.63:247,36,0	1/1:9,18:27:47.34:324,47,0	0/0:31,2:35:67:0,67,710	1/1:2,9:11:23.78:164,24,0
chr10	31189955	.	GGGGT	G	2786.06	PASS	AB=0.974;AC=37;AF=0.661;AN=56;BaseQRankSum=-3.361;DP=426;FS=17.467;HRun=0;HaplotypeScore=92.7207;InbreedingCoeff=0.6211;MQ=81.16;MQ0=0;MQRankSum=-1.683;QD=9.84;ReadPosRankSum=-1.010;VQSLOD=1.4100;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:28,2:30:39.97:415,40,0	1/1:3,0:3:3.46:35,3,0	0/0:22,0:19:24.42:0,24,483	0/0:20,0:20:42.55:0,43,597	1/1:17,0:17:20.48:126,20,0	1/1:18,1:19:15.18:111,15,0	1/1:27,1:28:25.89:212,26,0	1/1:10,0:9:16.27:152,16,0	0/0:16,0:16:48.10:0,48,670	0/1:8,0:8:27.91:46,0,28	1/1:9,0:9:5.94:46,6,0	1/1:9,1:10:23.38:205,23,0	1/1:16,0:16:2.50:149,2,0	1/1:9,0:9:24.29:187,24,0	0/0:10,0:10:24.07:0,24,430	0/1:14,0:14:40.88:113,0,41	1/1:18,1:19:41.31:335,41,0	1/1:9,0:9:5.50:25,5,0	0/0:15,0:15:1.61:0,2,19	0/0:11,0:11:22.28:0,22,123	0/0:32,0:32:21.28:0,21,202	1/1:3,9:12:5.63:64,6,0	1/1:19,0:19:4.29:23,4,0	1/1:20,0:19:24.32:391,24,0	0/1:11,1:12:1.18:73,0,1	1/1:13,1:14:32.12:236,32,0	0/0:16,0:16:18.04:0,18,45	1/1:5,0:5:5.79:36,6,0
chr10	31189956	.	GGGT	G	4769.72	PASS	AB=0.861;AC=44;AF=0.786;AN=56;BaseQRankSum=-0.407;DP=429;FS=8.507;HRun=0;HaplotypeScore=80.6629;InbreedingCoeff=0.4843;MQ=81.05;MQ0=0;MQRankSum=-3.804;QD=13.25;ReadPosRankSum=3.349;VQSLOD=3.4269;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:29,3:32:21.61:366,22,0	1/1:2,1:3:8.88:86,9,0	0/0:22,0:18:18.75:0,19,427	0/0:21,0:21:35.83:0,36,479	1/1:1,16:17:20.78:183,21,0	1/1:2,17:19:17.34:247,17,0	1/1:8,20:28:21.46:273,21,0	1/1:9,1:9:16.25:152,16,0	0/0:16,0:16:46.71:0,47,443	1/1:9,0:9:12.46:105,12,0	1/1:8,0:8:5.97:46,6,0	1/1:9,1:10:23.79:222,24,0	1/1:15,1:16:32.95:325,33,0	1/1:9,0:9:26.88:252,27,0	0/0:10,0:10:24.05:0,24,335	0/1:12,1:13:6.91:327,0,7	1/1:16,3:19:47.16:442,47,0	1/1:3,6:9:6:89,6,0	1/1:16,0:16:10.09:163,10,0	0/1:11,0:11:42.68:43,0,74	0/1:29,3:32:98.59:242,0,99	1/1:11,1:12:5.70:71,6,0	1/1:1,18:19:4.83:88,5,0	1/1:19,2:20:53.80:525,54,0	0/1:4,8:12:5.29:60,0,5	1/1:5,9:14:27.43:235,27,0	1/1:16,0:16:34.24:184,34,0	1/1:1,4:5:2.15:43,2,0
chr10	31192916	.	C	CT	2802.96	PASS	AB=0.736;AC=30;AF=0.536;AN=56;BaseQRankSum=5.495;DP=593;FS=0.000;HRun=15;HaplotypeScore=112.6028;InbreedingCoeff=-0.0464;MQ=77.80;MQ0=0;MQRankSum=-1.316;QD=5.73;ReadPosRankSum=0.558;VQSLOD=2.5706;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:14,19:35:1.98:186,0,2	1/1:3,5:9:11.66:73,12,0	0/1:22,0:16:10.17:22,0,10	0/0:18,0:16:0.80:0,1,28	1/1:10,13:24:29.66:221,30,0	0/1:12,10:23:17.78:174,0,18	0/1:9,13:22:19.98:147,0,20	0/1:20,16:39:15.56:274,0,16	0/0:11,0:11:7.44:0,7,107	0/1:26,1:27:24.64:25,0,170	0/0:21,0:21:22.65:0,23,141	0/1:6,9:16:0.18:97,0,0	1/1:5,7:12:11.99:101,12,0	0/1:10,10:20:26.67:49,0,27	0/0:17,0:17:31.25:0,31,182	1/1:11,7:18:18.33:222,18,0	1/1:8,13:23:2.82:122,3,0	1/1:15,9:27:1.01:258,1,0	0/1:15,5:22:49.49:49,0,64	0/0:28,0:29:44.45:0,44,253	0/0:5,0:5:2.78:0,3,17	0/1:14,10:24:13.38:186,0,13	0/1:11,6:18:2.75:75,0,3	1/1:4,12:16:23.97:201,24,0	0/1:10,9:19:12.23:110,0,12	0/1:18,16:34:56.40:217,0,56	0/1:19,4:25:33.48:33,0,139	1/1:5,6:13:17.67:129,18,0
chr10	31194277	.	C	CT	986.99	PASS	AB=0.799;AC=9;AF=0.161;AN=56;BaseQRankSum=-4.161;DP=630;FS=4.161;HRun=13;HaplotypeScore=74.0538;InbreedingCoeff=0.3356;MQ=68.24;MQ0=0;MQRankSum=-1.205;QD=6.29;ReadPosRankSum=-1.172;VQSLOD=2.3989;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:35:81.30:0,81,542	0/0:17,0:17:41.64:0,42,288	0/0:15,0:12:2.79:0,3,25	0/1:11,0:11:10.65:28,0,11	0/1:30,3:35:4.47:4,0,366	0/0:22,0:22:49.61:0,50,335	0/0:16,0:16:38.66:0,39,267	0/0:34,1:38:33.93:0,34,357	0/0:17,0:19:34.72:0,35,232	0/0:26,0:27:55.51:0,56,373	0/0:18,1:21:21.42:0,21,251	0/0:23,0:23:40.56:0,41,273	0/0:16,0:18:40.64:0,41,271	0/0:18,0:19:46.63:0,47,313	0/0:17,0:17:35.54:0,36,241	0/0:19,0:22:44.47:0,44,276	0/0:13,1:16:8.92:0,9,189	0/1:18,5:24:67.75:68,0,168	1/1:12,8:21:9.45:230,9,0	0/1:9,16:25:13.30:304,0,13	1/1:2,11:13:27.03:251,27,0	0/0:15,0:20:39.68:0,40,234	0/0:28,0:28:47.20:0,47,327	0/0:23,0:23:56.40:0,56,389	0/0:19,0:22:38.58:0,39,264	0/0:34,0:35:75.21:0,75,497	0/1:9,16:28:13.43:247,0,13	0/0:18,0:19:28.69:0,29,189
chr10	31195791	.	T	TG	16995.87	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-16.241;DP=725;FS=4.623;HRun=4;HaplotypeScore=70.0944;InbreedingCoeff=0.9971;MQ=80.75;MQ0=0;MQRankSum=-4.191;QD=33.72;ReadPosRankSum=3.322;VQSLOD=5.6416;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,36:37:87.29:1190,87,0	1/1:0,5:5:15.05:205,15,0	0/0:20,0:20:52.35:0,52,559	0/0:20,0:20:46.31:0,46,499	1/1:1,24:25:60.04:775,60,0	1/1:1,29:30:75.25:1020,75,0	1/1:3,34:37:90.30:1231,90,0	1/1:9,29:38:88.83:1172,89,0	0/0:28,0:28:81.23:0,81,918	1/1:4,18:21:54.12:701,54,0	1/1:2,15:17:39.13:533,39,0	1/1:1,30:31:84.28:1149,84,0	1/1:2,20:22:54.18:720,54,0	1/1:2,34:36:99:1345,99,0	0/0:28,0:28:81.23:0,81,919	1/1:2,23:25:29.17:787,29,0	1/1:0,27:27:75.25:1026,75,0	1/1:2,19:21:57.19:780,57,0	0/0:31,0:31:93.27:0,93,1054	0/0:31,0:31:83.96:0,84,921	0/0:30,0:30:78.21:0,78,874	1/1:2,10:12:30.10:410,30,0	1/1:2,26:28:63.21:862,63,0	1/1:4,18:22:51.17:697,51,0	1/1:2,24:26:56.91:758,57,0	1/1:2,30:32:90.30:1225,90,0	0/0:33,0:33:93.22:0,93,1031	1/1:1,10:11:30.10:410,30,0
chr10	31196207	.	GA	G	9363.46	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=8.962;DP=627;FS=0.346;HRun=10;HaplotypeScore=70.7050;InbreedingCoeff=0.9925;MQ=80.65;MQ0=0;MQRankSum=-2.014;QD=21.53;ReadPosRankSum=3.519;VQSLOD=5.6738;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,18:24:47.98:417,48,0	1/1:1,8:9:20.99:182,21,0	0/0:20,0:18:34.28:0,34,336	0/0:21,0:21:26.52:0,27,336	1/1:2,22:24:62.98:547,63,0	1/1:3,28:31:78.96:722,79,0	1/1:1,12:13:35.99:313,36,0	1/1:4,34:38:98.94:854,99,0	0/0:22,0:22:60.15:0,60,656	1/1:2,23:25:68.96:594,69,0	1/1:3,20:23:26.97:462,27,0	1/1:2,11:13:26.99:234,27,0	1/1:2,15:17:41.99:365,42,0	1/1:2,20:22:56.98:495,57,0	0/0:21,0:21:60.14:0,60,647	1/1:1,17:18:44.98:389,45,0	1/1:1,24:25:62.12:545,62,0	1/1:3,17:20:44.99:391,45,0	0/0:27,0:27:54.13:0,54,584	0/0:26,0:26:63.17:0,63,697	0/0:22,0:22:57.15:0,57,630	1/1:2,19:21:53.98:468,54,0	1/1:5,26:31:68.94:592,69,0	1/1:3,17:20:30.58:419,31,0	1/1:0,20:20:53.99:469,54,0	1/1:2,32:34:92.96:804,93,0	0/0:31,0:31:90.23:0,90,987	1/1:2,5:7:11.24:103,11,0
chr10	31196563	.	T	TGAGA	1647.99	PASS	AB=0.950;AC=40;AF=0.800;AN=50;BaseQRankSum=-3.014;DP=438;FS=15.157;HRun=0;HaplotypeScore=93.3284;InbreedingCoeff=0.2911;MQ=69.65;MQ0=8;MQRankSum=1.718;QD=4.76;ReadPosRankSum=-0.421;VQSLOD=1.0315;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:24:3.81:83,0,4	1/1:5,0:5:3.01:41,3,0	./.	./.	1/1:18,0:18:6.01:66,6,0	1/1:14,0:14:9.03:122,9,0	0/1:22,0:26:0.47:0,0,64	1/1:20,0:20:4.58:11,5,0	0/0:15,0:15:3.01:0,3,46	0/0:14,0:16:5.65:0,6,55	0/0:11,0:13:3:0,3,27	1/1:12,0:12:15.05:280,15,0	1/1:12,0:12:2.90:58,3,0	1/1:7,1:7:3.90:72,4,0	1/1:10,0:9:6.02:111,6,0	1/1:16,0:16:3.01:43,3,0	1/1:18,5:25:9.03:199,9,0	1/1:16,0:15:12.94:191,13,0	1/1:21,0:21:10.25:104,10,0	1/1:10,0:10:3.01:42,3,0	1/1:20,0:18:9.03:154,9,0	./.	0/1:14,0:14:0:0,0,1	1/1:13,6:19:3.01:70,3,0	1/1:8,0:8:6.02:110,6,0	1/1:20,0:20:2.70:7,3,0	0/1:17,0:19:7.31:7,0,37	1/1:8,0:8:0.89:2,1,0
chr10	31197240	.	CT	C	8467.38	PASS	AB=0.746;AC=40;AF=0.714;AN=56;BaseQRankSum=-1.588;DP=586;FS=5.343;HRun=10;HaplotypeScore=64.1989;InbreedingCoeff=0.8552;MQ=68.92;MQ0=9;MQRankSum=-0.577;QD=18.90;ReadPosRankSum=3.090;VQSLOD=5.7930;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,37:42:97.99:839,98,0	1/1:0,9:9:26.99:234,27,0	0/1:8,1:9:10.46:10,0,108	0/0:14,0:13:11.83:0,12,186	1/1:3,11:14:32.99:285,33,0	1/1:3,11:14:26.99:234,27,0	1/1:1,18:19:47.99:417,48,0	1/1:6,23:29:59.95:516,60,0	0/0:18,0:18:48.13:0,48,530	1/1:8,22:29:62.97:544,63,0	1/1:5,18:24:46.98:396,47,0	1/1:2,16:18:41.99:365,42,0	1/1:5,10:14:29.99:260,30,0	1/1:3,17:20:50.99:443,51,0	0/0:26,0:26:60.15:0,60,656	1/1:4,18:22:17.80:384,18,0	1/1:5,40:43:99:996,116,0	1/1:2,15:17:41.99:365,42,0	0/0:3,0:11:24.74:0,25,146	0/0:5,0:18:31.17:0,31,211	0/0:1,0:27:46.41:0,46,238	1/1:4,17:19:44.97:390,45,0	0/1:5,11:16:0.20:227,0,0	1/1:2,27:26:65.98:573,66,0	1/1:6,11:17:26.97:234,27,0	1/1:4,27:31:77.98:676,78,0	0/0:2,0:23:25.57:0,26,128	1/1:2,4:6:9:78,9,0
chr10	31198055	.	TTGTCTGTCTGTCTGTC	T	15138.67	PASS	AB=0.665;AC=36;AF=0.643;AN=56;BaseQRankSum=0.839;DP=575;FS=7.143;HRun=0;HaplotypeScore=272.0546;InbreedingCoeff=0.7480;MQ=58.56;MQ0=3;MQRankSum=-8.101;QD=42.52;ReadPosRankSum=3.884;VQSLOD=2.8636;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:16,11:27:24.08:1039,24,0	1/1:4,2:6:6.02:265,6,0	0/0:24,0:16:12.04:0,12,784	0/0:24,0:19:36.12:0,36,1466	1/1:4,7:11:9.03:398,9,0	1/1:13,19:32:48.16:2096,48,0	1/1:9,10:19:24.08:1045,24,0	1/1:26,0:26:6:55,6,0	0/0:25,0:27:57.20:0,57,3868	0/0:12,0:27:66.18:0,66,1380	0/1:8,0:19:16.43:16,0,223	1/1:12,19:31:42.14:1853,42,0	1/1:5,15:20:36.12:1591,36,0	1/1:7,13:20:27.09:1194,27,0	0/0:23,0:23:48.16:0,48,3260	1/1:7,8:15:18.06:796,18,0	1/1:7,6:13:9.03:398,9,0	1/1:10,5:15:12.04:531,12,0	0/0:14,0:31:60.21:0,60,1126	0/0:11,0:21:30.10:0,30,628	0/0:10,0:11:6.02:0,6,123	1/1:9,12:21:11.87:530,12,0	1/1:12,8:20:18.06:760,18,0	1/1:6,7:13:11.95:484,12,0	1/1:9,8:17:18.06:796,18,0	0/1:13,10:23:53.41:1027,0,53	0/0:13,0:31:54.17:0,54,842	1/1:6,2:7:6.02:265,6,0
chr10	31199727	.	CT	C	13391.06	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=13.701;DP=678;FS=0.000;HRun=6;HaplotypeScore=69.0706;InbreedingCoeff=0.9962;MQ=79.67;MQ0=0;MQRankSum=-1.679;QD=27.96;ReadPosRankSum=2.811;VQSLOD=5.4246;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,38:40:99:1161,108,0	1/1:0,8:8:21.05:226,21,0	0/0:20,0:20:24.63:0,25,492	0/0:12,0:12:17.85:0,18,213	1/1:2,23:25:69.17:741,69,0	1/1:0,27:27:72.18:774,72,0	1/1:0,23:23:60.15:645,60,0	1/1:5,27:32:81.20:870,81,0	0/0:22,0:22:66.19:0,66,851	1/1:4,27:31:78.14:817,78,0	1/1:1,13:14:39.10:419,39,0	1/1:1,22:23:66.17:709,66,0	1/1:3,20:23:60.15:645,60,0	1/1:1,16:17:42.11:451,42,0	0/0:30,0:30:84.27:0,84,1105	1/1:1,22:23:54.13:580,54,0	1/1:3,21:24:60.15:645,60,0	1/1:2,21:23:54.14:580,54,0	0/0:22,0:22:63.20:0,63,829	0/0:22,0:22:66.21:0,66,868	0/0:35,0:35:99:0,105,1366	1/1:2,28:30:84.21:903,84,0	1/1:3,20:23:56.80:612,57,0	1/1:3,25:28:66.16:709,66,0	1/1:1,25:26:75.19:806,75,0	1/1:2,29:31:84.21:902,84,0	0/0:36,0:36:96.31:0,96,1260	1/1:2,6:8:18.04:193,18,0
chr10	31200310	.	TGGCTGGGCTGGGCTGGGCTGGGCTG	T	7779.43	PASS	AB=1.000;AC=41;AF=0.732;AN=56;BaseQRankSum=5.192;DP=491;FS=12.344;HRun=0;HaplotypeScore=203.0360;InbreedingCoeff=0.6016;MQ=60.97;MQ0=28;MQRankSum=-5.494;QD=20.75;ReadPosRankSum=2.051;VQSLOD=2.9758;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:14,15:29:8.99:270,9,0	1/1:2,4:6:3.48:136,3,0	0/1:32,0:6:0.28:0,0,268	0/0:54,0:13:14.76:0,15,208	1/1:9,5:14:2.97:20,3,0	1/1:8,13:21:12.04:781,12,0	1/1:22,0:21:32.78:283,33,0	1/1:17,5:22:3.10:108,3,0	0/0:5,0:5:6.02:0,6,598	1/1:10,9:19:24.06:642,24,0	1/1:2,2:4:3.01:195,3,0	1/1:5,14:19:5.86:390,6,0	1/1:6,9:15:9.03:585,9,0	1/1:6,17:23:9.03:585,9,0	0/0:6,0:6:12.04:0,12,1111	1/1:3,13:16:18.06:1171,18,0	1/1:5,24:29:9.03:427,9,0	1/1:5,13:18:3.01:195,3,0	0/0:9,0:9:12.01:0,12,372	0/0:2,0:2:6.02:0,6,499	0/0:34,0:34:48.15:0,48,3602	1/1:7,7:14:3.48:196,3,0	1/1:3,2:5:3.01:195,3,0	1/1:7,14:21:3.01:195,3,0	1/1:7,7:14:6.02:233,6,0	1/1:10,17:27:41.90:1017,42,0	0/0:6,0:6:15.02:0,15,1150	1/1:2,3:5:3.01:152,3,0
chr10	31200334	.	TG	T	672.51	PASS	AB=0.975;AC=28;AF=0.500;AN=56;BaseQRankSum=7.827;DP=420;FS=0.000;HRun=3;HaplotypeScore=77.3023;InbreedingCoeff=0.0161;MQ=64.76;MQ0=40;MQRankSum=-5.328;QD=2.39;ReadPosRankSum=1.674;VQSLOD=-0.5571;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:18,0:18:10.03:42,0,10	0/1:5,0:5:19.89:31,0,20	0/1:44,0:8:2.92:3,0,145	0/0:79,1:20:3.86:0,4,109	1/1:6,0:6:1.55:4,2,0	0/1:16,0:16:18.47:18,0,69	0/1:14,11:24:99:253,0,172	0/1:6,0:6:31.71:32,0,52	0/0:5,0:5:15.05:0,15,216	0/1:12,0:12:38.90:39,0,95	1/1:2,0:2:2.50:9,2,0	1/1:14,0:14:4.89:17,5,0	0/1:12,0:12:15.48:16,0,15	0/1:18,0:18:13.33:13,0,15	0/0:6,0:6:18.06:0,18,259	1/1:13,0:13:14.23:47,14,0	1/1:25,1:26:10.76:88,11,0	1/1:13,0:13:2.37:8,2,0	0/0:10,0:8:24.08:0,24,344	0/0:2,0:2:6.02:0,6,86	0/0:23,1:24:63.18:0,63,862	0/1:9,0:9:2.41:2,0,18	1/1:2,0:2:2.37:8,2,0	1/1:14,0:14:2.37:8,2,0	0/1:8,0:8:2.50:2,0,33	0/1:18,0:18:99:192,0,110	0/0:8,0:8:21.07:0,21,302	0/0:3,0:3:3.01:0,3,30
chr10	31201664	.	GT	G	4639.54	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=2.313;DP=374;FS=13.894;HRun=1;HaplotypeScore=48.9336;InbreedingCoeff=0.8820;MQ=86.01;MQ0=4;MQRankSum=-0.634;QD=18.86;ReadPosRankSum=3.257;VQSLOD=3.6538;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,13:13:12.02:134,12,0	1/1:5,1:6:14.62:133,15,0	0/0:35,0:20:17.37:0,17,285	0/0:23,0:20:4.69:0,5,197	1/1:0,11:12:32.66:299,33,0	1/1:1,11:14:24.02:275,24,0	1/1:1,18:20:33.07:408,33,0	1/1:12,1:14:41.84:371,42,0	0/0:9,0:9:23.96:0,24,277	1/1:0,0:13:32.91:263,33,0	1/1:0,0:16:31.72:241,32,0	1/1:4,5:12:16.80:178,17,0	1/1:0,16:16:21.07:285,21,0	1/1:0,10:11:18.05:232,18,0	0/0:16,0:16:44.80:0,45,527	1/1:3,3:7:13.82:134,14,0	1/1:2,17:19:32.14:414,32,0	1/1:0,14:14:21.07:286,21,0	0/0:5,0:5:12.01:0,12,128	0/0:16,0:16:34.34:0,34,326	0/0:10,0:9:27.04:0,27,317	1/1:0,8:8:9.03:105,9,0	1/1:0,7:8:3:25,3,0	1/1:8,9:18:47.93:522,48,0	1/1:1,1:7:5.95:63,6,0	1/1:1,8:8:20.74:188,21,0	0/0:14,0:14:39.05:0,39,431	1/1:0,9:9:6.02:82,6,0
chr10	31202154	.	GAT	G	1044.40	PASS	AB=0.983;AC=22;AF=0.393;AN=56;BaseQRankSum=5.511;DP=559;FS=2.580;HRun=0;HaplotypeScore=146.6182;InbreedingCoeff=-0.3428;MQ=71.50;MQ0=14;MQRankSum=2.606;QD=3.16;ReadPosRankSum=-2.347;VQSLOD=2.5741;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:24:38.09:97,0,38	0/1:12,1:13:14.52:34,0,15	0/0:62,0:18:10.11:0,10,232	0/0:78,0:39:28.01:0,28,506	0/1:24,0:24:13.81:17,0,14	0/1:22,1:23:14.26:139,0,14	0/1:10,0:10:13.29:25,0,13	0/1:17,0:16:50.26:71,0,50	0/0:21,0:21:52.01:0,52,967	0/1:18,0:17:19.23:166,0,19	0/1:19,1:20:5.81:64,0,6	0/1:11,0:11:16.97:17,0,102	0/1:12,0:12:29.16:29,0,69	0/1:14,1:15:45.78:87,0,46	0/1:12,0:12:5.82:6,0,340	0/1:11,0:11:15.79:16,0,38	1/1:14,0:14:13.42:65,13,0	0/1:21,0:21:13.94:14,0,172	0/1:11,0:11:27.25:27,0,324	0/0:22,0:22:54.17:0,54,922	0/0:7,0:6:18.01:0,18,307	1/1:16,0:16:5.24:112,5,0	0/1:20,0:20:36.20:45,0,36	0/1:11,1:12:33.65:75,0,34	0/0:13,0:13:8.41:0,8,131	0/1:26,0:26:79.78:102,0,80	0/0:20,0:20:51.63:0,52,879	0/0:4,0:4:6.62:0,7,60
chr10	31202160	.	GAT	G	674.08	PASS	AB=0.995;AC=19;AF=0.339;AN=56;BaseQRankSum=6.756;DP=567;FS=0.439;HRun=0;HaplotypeScore=150.0830;InbreedingCoeff=-0.2801;MQ=70.45;MQ0=17;MQRankSum=2.148;QD=2.35;ReadPosRankSum=-1.251;VQSLOD=2.4313;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:25:80.73:99,0,81	0/1:15,0:15:28.77:74,0,29	0/0:65,0:17:19.86:0,20,283	0/0:81,0:39:37.37:0,37,767	0/1:25,0:25:10.93:11,0,71	0/1:23,0:23:71.31:77,0,71	0/1:10,0:10:17.04:17,0,21	0/1:21,0:19:22.22:22,0,126	0/0:20,0:20:56.52:0,57,1045	0/1:18,0:17:61:102,0,61	0/0:16,0:16:2.96:0,3,19	0/0:10,0:10:5.25:0,5,190	0/1:11,0:11:6.87:7,0,119	0/1:13,0:13:17.21:17,0,117	0/1:13,0:13:17.63:18,0,331	0/1:11,1:12:46.97:47,0,54	1/1:10,3:13:12.65:84,13,0	0/0:21,0:21:4.98:0,5,394	0/1:12,0:11:20.64:21,0,438	0/0:20,0:20:48.12:0,48,851	0/0:8,0:6:18.06:0,18,344	1/1:16,0:16:2.21:54,2,0	0/1:20,0:20:47.64:48,0,59	0/1:14,0:14:35.02:35,0,52	0/0:13,0:13:8.40:0,8,140	0/1:26,0:26:99:102,0,184	0/0:21,0:21:50.11:0,50,874	0/0:5,0:4:6.68:0,7,72
chr10	31202164	.	GAT	G	2892.13	PASS	AB=0.955;AC=34;AF=0.630;AN=54;BaseQRankSum=5.017;DP=566;FS=9.744;HRun=0;HaplotypeScore=143.3767;InbreedingCoeff=0.6205;MQ=68.84;MQ0=19;MQRankSum=0.761;QD=9.24;ReadPosRankSum=-0.432;VQSLOD=2.6471;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:23:30.06:233,30,0	1/1:15,0:15:17.86:167,18,0	0/0:64,0:17:10.37:0,10,288	0/0:76,0:36:35.31:0,35,445	1/1:26,0:26:33.01:258,33,0	1/1:22,1:24:38.68:293,39,0	1/1:10,0:11:2.04:99,2,0	1/1:19,0:17:15.72:103,16,0	0/0:20,0:20:59.92:0,60,979	1/1:18,0:17:34.86:262,35,0	./.	0/1:9,0:9:15.44:35,0,15	0/1:7,0:9:0.87:41,0,1	1/1:14,0:14:10.28:108,10,0	0/0:13,0:13:6.98:0,7,328	1/1:11,0:13:14.82:106,15,0	1/1:13,0:13:14.35:112,14,0	0/1:20,0:20:43.47:79,0,43	0/0:13,0:12:8.21:0,8,415	0/0:21,0:20:37.39:0,37,531	0/0:8,0:6:18.06:0,18,260	1/1:17,1:17:32.99:293,33,0	1/1:22,1:24:40.88:337,41,0	0/1:14,0:14:25.59:45,0,26	1/1:13,0:13:14.91:120,15,0	1/1:26,0:26:34.64:350,35,0	0/0:21,0:21:40.84:0,41,564	1/1:4,0:3:4.88:46,5,0
chr10	31202168	.	AAG	A	473.35	PASS	AB=0.961;AC=13;AF=0.250;AN=52;BaseQRankSum=-3.336;DP=572;FS=9.622;HRun=0;HaplotypeScore=152.4762;InbreedingCoeff=0.3719;MQ=67.65;MQ0=21;MQRankSum=2.304;QD=2.38;ReadPosRankSum=0.726;VQSLOD=1.8759;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:13.61:0,14,83	0/1:16,0:16:3.50:3,0,52	./.	0/1:74,0:32:0.21:0,0,0	0/0:26,0:27:11.97:0,12,96	0/0:24,0:23:3.84:0,4,27	0/0:10,0:10:5.99:0,6,47	0/0:19,0:17:21.59:0,22,137	0/0:20,0:20:30.04:0,30,392	0/0:18,0:17:0.65:0,1,77	./.	0/0:11,0:11:17.97:0,18,162	0/0:9,0:9:6.87:0,7,54	0/0:12,0:13:13.16:0,13,140	0/1:13,1:14:60.26:60,0,139	0/0:12,0:13:10.59:0,11,80	0/1:12,0:12:3.57:17,0,4	0/0:21,0:22:26.33:0,26,183	0/1:11,0:11:31.26:31,0,69	1/1:10,11:20:26.65:225,27,0	1/1:12,0:10:3.75:30,4,0	1/1:18,0:17:3.36:21,3,0	0/0:25,0:25:0.82:0,1,80	0/0:16,0:16:10.21:0,10,116	0/0:14,0:14:8.56:0,9,67	0/0:26,0:26:35.50:0,36,260	1/1:10,9:19:21.06:232,21,0	0/0:5,0:4:5.88:0,6,37
chr10	31202421	.	C	CT	8160.67	PASS	AB=1.000;AC=41;AF=0.732;AN=56;BaseQRankSum=-8.671;DP=615;FS=17.282;HRun=11;HaplotypeScore=74.2481;InbreedingCoeff=0.9004;MQ=66.10;MQ0=2;MQRankSum=-3.111;QD=17.51;ReadPosRankSum=2.359;VQSLOD=4.2314;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:12,38:52:89.27:825,89,0	1/1:1,5:6:11.96:121,12,0	0/1:23,0:17:4.43:4,0,104	0/0:13,0:10:15.46:0,15,87	1/1:3,13:19:42.60:378,43,0	1/1:2,13:16:35.50:329,35,0	1/1:4,21:26:18.09:490,18,0	1/1:26,13:39:44.53:544,45,0	0/0:14,0:14:20.88:0,21,162	1/1:14,17:32:36.58:507,37,0	1/1:4,20:25:38.63:486,39,0	1/1:2,14:16:36.07:365,36,0	1/1:2,11:13:33.07:335,33,0	1/1:0,11:13:35.74:333,36,0	0/0:18,0:19:46.85:0,47,354	1/1:4,17:21:45.09:457,45,0	1/1:5,18:23:35.06:355,35,0	1/1:4,19:23:51.09:513,51,0	0/0:29,0:31:69.74:0,70,515	0/0:21,0:22:30.35:0,30,367	0/0:16,0:16:32.78:0,33,247	1/1:7,6:15:6.08:198,6,0	1/1:6,13:19:11.63:283,12,0	1/1:4,12:19:35.58:317,36,0	1/1:4,29:33:72.14:731,72,0	1/1:6,13:22:41.59:377,42,0	0/0:31,0:33:84.71:0,85,635	1/1:2,7:9:21.04:213,21,0
chr10	31204809	.	G	GC	3070.12	PASS	AB=0.958;AC=21;AF=0.375;AN=56;BaseQRankSum=4.410;DP=594;FS=0.852;HRun=8;HaplotypeScore=102.7431;InbreedingCoeff=0.7622;MQ=78.13;MQ0=0;MQRankSum=-2.981;QD=15.83;ReadPosRankSum=0.856;VQSLOD=3.5174;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:92.52:0,93,483	0/0:13,0:13:11.41:0,11,69	0/0:22,0:21:35.60:0,36,310	0/1:18,3:19:54.52:94,0,55	0/1:16,0:16:30.94:31,0,71	0/0:26,0:26:51.23:0,51,264	0/0:28,0:28:48.67:0,49,259	0/0:27,0:27:37.97:0,38,231	0/0:14,0:14:42.02:0,42,384	0/0:17,0:17:36.65:0,37,208	0/1:11,0:11:7.56:8,0,70	1/1:2,11:13:29.60:315,30,0	1/1:7,8:15:29.91:271,30,0	1/1:1,22:23:48.11:507,48,0	0/0:26,0:26:63.03:0,63,576	1/1:3,12:15:36.09:392,36,0	0/0:22,0:22:31.63:0,32,166	1/1:5,11:17:39.06:401,39,0	0/0:22,0:22:50.99:0,51,459	0/0:24,0:24:66.02:0,66,600	0/0:51,0:51:99:0,138,1263	1/1:4,3:7:7.25:62,7,0	1/1:2,6:8:15.91:157,16,0	1/1:4,20:25:56.14:593,56,0	1/1:5,15:23:45.84:452,46,0	0/0:23,0:23:43.83:0,44,237	0/0:28,0:28:60:0,60,544	0/0:14,0:14:36.86:0,37,182
chr10	31204818	.	A	ACC	13752.73	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-2.109;DP=569;FS=15.420;HRun=8;HaplotypeScore=78.8697;InbreedingCoeff=0.9818;MQ=74.58;MQ0=0;MQRankSum=-3.530;QD=36.48;ReadPosRankSum=2.059;VQSLOD=3.6404;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,35:39:93.08:1671,93,0	1/1:1,5:6:9.03:162,9,0	0/0:16,0:16:36.05:0,36,445	0/0:19,0:17:33.29:0,33,364	1/1:4,12:17:36.07:535,36,0	1/1:0,29:31:57.20:1025,57,0	1/1:2,32:34:48.16:864,48,0	1/1:4,19:25:57.17:927,57,0	0/0:14,0:14:42.14:0,42,556	1/1:0,18:18:54.14:868,54,0	1/1:0,12:12:24.08:424,24,0	1/1:3,10:13:31.91:483,32,0	1/1:4,8:12:30.09:458,30,0	1/1:6,14:20:46.40:757,46,0	0/0:22,0:22:60.20:0,60,799	1/1:3,11:14:39.12:646,39,0	1/1:2,17:19:33.11:594,33,0	1/1:5,10:15:33.11:547,33,0	0/0:21,0:21:29.19:0,29,569	0/0:27,0:27:78.22:0,78,989	0/0:52,0:52:99:0,153,1972	1/1:4,2:6:12.02:155,12,0	1/1:3,8:11:15.05:262,15,0	1/1:14,14:28:57.29:959,57,0	1/1:9,14:23:53.79:810,54,0	1/1:2,18:21:54.14:904,54,0	0/0:20,0:20:57.17:0,57,743	1/1:0,13:13:39.13:702,39,0
chr10	31205824	.	TGCACGC	T	6622.80	PASS	AB=0.828;AC=33;AF=0.589;AN=56;BaseQRankSum=5.990;DP=537;FS=2.405;HRun=0;HaplotypeScore=172.5833;InbreedingCoeff=0.6252;MQ=63.24;MQ0=2;MQRankSum=-1.030;QD=20.76;ReadPosRankSum=0.894;VQSLOD=4.7921;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:20,6:26:28.63:460,29,0	1/1:4,0:5:1.94:60,2,0	0/0:9,0:5:3.90:0,4,75	0/0:16,0:11:5.95:0,6,180	1/1:11,0:12:18.03:304,18,0	0/1:9,3:12:14.91:223,0,15	1/1:16,10:26:27.01:466,27,0	1/1:8,10:17:45.04:798,45,0	0/0:30,0:30:87.27:0,87,2483	0/0:30,0:30:78.25:0,78,2253	0/0:12,0:12:30.07:0,30,769	1/1:16,2:19:0.55:455,1,0	1/1:14,1:18:1.14:370,1,0	1/1:14,2:17:19.91:328,20,0	0/0:24,0:24:63.19:0,63,1694	0/1:14,4:18:6.16:349,0,6	0/1:22,4:25:24.53:292,0,25	1/1:24,2:25:38.45:636,38,0	0/0:18,0:16:47.12:0,47,916	0/0:11,0:11:27.08:0,27,766	0/0:58,0:58:99:0,138,3844	1/1:9,4:14:16.83:202,17,0	1/1:9,2:13:21.06:414,21,0	1/1:27,2:29:0.32:101,0,0	1/1:17,1:19:33.25:508,33,0	1/1:8,2:10:27.81:384,28,0	0/0:10,0:10:27.07:0,27,620	1/1:9,0:10:13.09:271,13,0
chr10	31205825	.	GCA	G	4219.69	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=13.198;DP=529;FS=1.788;HRun=0;HaplotypeScore=148.5885;InbreedingCoeff=0.9160;MQ=63.24;MQ0=2;MQRankSum=-0.716;QD=13.57;ReadPosRankSum=1.596;VQSLOD=4.8617;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:22,3:25:34.46:319,34,0	1/1:4,1:5:6.34:29,6,0	0/0:9,0:5:3.01:0,3,44	0/0:16,0:11:8.42:0,8,158	1/1:10,1:11:18.02:177,18,0	1/1:12,1:13:4.26:119,4,0	1/1:25,1:26:27.37:286,27,0	1/1:17,0:16:44.97:404,45,0	0/0:31,0:31:87.23:0,87,1275	0/0:29,0:29:78.21:0,78,1143	0/0:12,0:12:30.04:0,30,392	1/1:19,0:19:19.14:289,19,0	1/1:16,0:16:19.85:188,20,0	1/1:14,1:15:29.09:321,29,0	0/0:24,0:24:62.69:0,63,816	1/1:16,2:18:12.42:185,12,0	1/1:21,2:22:19.59:249,20,0	1/1:25,1:25:46.11:369,46,0	0/0:18,0:16:47.10:0,47,538	0/0:9,0:9:27.06:0,27,381	0/0:59,0:59:99:0,114,1943	1/1:13,1:14:18:173,18,0	1/1:13,0:13:21.03:211,21,0	1/1:26,4:30:24.91:152,25,0	1/1:15,4:19:33.94:370,34,0	1/1:11,0:10:27.56:221,28,0	0/0:11,0:11:27.04:0,27,339	1/1:6,4:10:16.27:155,16,0
chr10	31205837	.	G	GCA	1901.97	PASS	AB=0.933;AC=43;AF=0.827;AN=52;BaseQRankSum=4.263;DP=572;FS=1.447;HRun=0;HaplotypeScore=170.6938;InbreedingCoeff=0.2815;MQ=53.92;MQ0=6;MQRankSum=-1.192;QD=4.01;ReadPosRankSum=0.777;VQSLOD=3.1395;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:26:18.93:23,0,19	1/1:6,0:6:2.49:6,2,0	./.	./.	1/1:15,0:15:5.99:48,6,0	1/1:18,0:18:1.14:94,1,0	1/1:30,0:30:2.20:12,2,0	1/1:18,0:16:6.89:43,7,0	0/0:38,0:38:44.44:0,44,390	1/1:28,0:28:20.20:227,20,0	1/1:9,0:9:3:27,3,0	1/1:21,0:21:5.01:91,5,0	1/1:15,0:15:9.72:70,10,0	1/1:18,0:18:16.96:102,17,0	0/0:25,0:27:46.08:0,46,394	0/0:17,0:17:1.47:0,1,12	1/1:31,0:29:11.83:141,12,0	1/1:30,0:28:2.44:36,2,0	0/1:11,1:10:0.98:40,0,1	1/1:6,1:7:6.02:86,6,0	0/1:54,8:63:99:582,0,101	1/1:13,0:13:4.63:16,5,0	1/1:12,0:12:2.97:20,3,0	1/1:42,0:41:12.25:69,12,0	1/1:20,0:20:10.64:54,11,0	1/1:14,0:13:10.13:104,10,0	1/1:10,1:12:9.01:96,9,0	1/1:14,0:13:9.80:52,10,0
chr10	31205894	.	T	TG	12513.40	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-6.676;DP=516;FS=1.051;HRun=5;HaplotypeScore=76.0021;InbreedingCoeff=0.9292;MQ=82.79;MQ0=1;MQRankSum=-7.031;QD=29.10;ReadPosRankSum=1.170;VQSLOD=5.3229;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,28:30:69.18:888,69,0	1/1:0,3:3:6.02:79,6,0	0/0:18,0:15:35.88:0,36,374	0/0:27,0:20:51.09:0,51,520	1/1:3,8:11:18.06:237,18,0	1/1:5,15:20:27.05:336,27,0	1/1:5,21:26:51.17:671,51,0	1/1:3,21:24:63.19:812,63,0	0/0:20,0:20:60.15:0,60,644	1/1:0,12:12:36.12:471,36,0	1/1:1,7:8:6.02:79,6,0	1/1:9,23:32:75.22:958,75,0	1/1:1,11:12:33.11:434,33,0	1/1:0,16:16:42.14:550,42,0	0/0:21,0:21:48.09:0,48,507	1/1:3,20:23:50.85:671,51,0	1/1:5,16:21:54.14:692,54,0	1/1:2,15:17:45.15:588,45,0	1/1:5,10:15:30.10:394,30,0	1/1:1,6:7:12:138,12,0	1/1:9,37:46:67.06:1216,67,0	1/1:1,8:9:21.07:276,21,0	1/1:1,8:9:24.08:315,24,0	1/1:5,29:34:69.19:889,69,0	1/1:4,9:13:30.08:379,30,0	1/1:3,23:25:69.22:903,69,0	1/1:1,8:9:24.08:316,24,0	1/1:1,6:7:18.04:221,18,0
chr10	31207816	.	C	CCA	33796.16	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=0.974;DP=767;FS=0.785;HRun=0;HaplotypeScore=116.5629;InbreedingCoeff=0.9933;MQ=89.55;MQ0=0;MQRankSum=-8.589;QD=51.76;ReadPosRankSum=3.154;VQSLOD=5.5359;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,41:46:99:2191,108,0	1/1:0,6:6:15.05:304,15,0	0/0:31,0:31:93.05:0,93,1382	0/0:29,0:29:73.42:0,73,1053	1/1:0,17:18:39.09:751,39,0	1/1:1,17:19:45.15:914,45,0	1/1:1,27:29:72.25:1447,72,0	1/1:4,35:40:99:2243,117,0	0/0:20,0:20:57.19:0,57,926	1/1:2,25:27:78.27:1548,78,0	1/1:1,18:20:54.14:1055,54,0	1/1:1,35:36:99:2009,99,0	1/1:1,27:28:69.24:1401,69,0	1/1:0,18:19:45.15:914,45,0	0/0:34,0:34:99:0,102,1591	1/1:1,20:21:60.21:1218,60,0	1/1:0,39:39:99:1966,99,0	1/1:1,7:8:18.06:341,18,0	1/1:4,21:26:75.25:1450,75,0	1/1:1,31:32:93.26:1820,93,0	1/1:2,49:54:99:2437,120,0	1/1:1,26:28:81.19:1534,81,0	1/1:1,24:26:60.21:1217,60,0	1/1:1,25:26:63.22:1278,63,0	1/1:3,27:30:75.26:1501,75,0	1/1:3,31:34:99:2031,102,0	1/1:1,25:26:69.24:1401,69,0	1/1:1,14:15:42.14:828,42,0
chr10	31208418	.	TTC	T	226.86	PASS	AB=1.000;AC=13;AF=0.271;AN=48;BaseQRankSum=0.213;DP=579;FS=6.145;HRun=0;HaplotypeScore=109.6732;InbreedingCoeff=0.3511;MQ=65.70;MQ0=15;MQRankSum=0.638;QD=1.35;ReadPosRankSum=-0.846;VQSLOD=1.6771;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:36:23.84:0,24,169	0/0:14,0:14:2.02:0,2,23	./.	./.	0/0:17,0:16:8.91:0,9,66	0/0:25,0:25:14.95:0,15,100	0/0:26,0:25:14.93:0,15,118	./.	1/1:14,6:20:23.99:230,24,0	0/0:33,0:32:39.90:0,40,356	0/0:22,0:18:11.91:0,12,91	0/0:16,0:16:20.94:0,21,242	0/1:14,0:14:7.54:8,0,137	0/1:23,0:23:2.80:3,0,143	0/0:17,0:17:12.02:0,12,147	0/1:25,0:25:1.84:2,0,140	0/1:9,0:9:4.53:5,0,40	0/0:10,0:10:2.76:0,3,161	1/1:21,0:19:7.19:32,7,0	1/1:19,0:17:4:37,4,0	1/1:14,0:13:5.94:41,6,0	0/0:15,0:15:3:0,3,25	0/0:17,0:15:12.29:0,12,88	0/0:21,0:22:17.95:0,18,171	0/0:16,0:16:5.99:0,6,68	0/0:19,0:18:12.86:0,13,226	0/1:23,0:23:9.39:9,0,26	./.
chr10	31208460	.	C	CTGTGTG	751.32	PASS	AB=0.848;AC=7;AF=0.125;AN=56;BaseQRankSum=-2.125;DP=510;FS=4.297;HRun=0;HaplotypeScore=173.5459;InbreedingCoeff=0.4277;MQ=50.73;MQ0=20;MQRankSum=2.164;QD=6.59;ReadPosRankSum=-1.298;VQSLOD=1.8993;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:32:28.18:0,28,272	0/0:8,0:8:6.01:0,6,71	0/0:12,0:5:8.96:0,9,90	0/0:15,0:6:3.90:0,4,43	0/0:18,0:17:21.89:0,22,376	0/0:22,0:21:50.37:0,50,735	0/0:14,0:13:15.49:0,15,164	0/0:29,0:29:48.70:0,49,733	0/1:21,0:20:4.73:5,0,530	0/0:29,0:27:75.16:0,75,1115	0/0:22,0:19:14.80:0,15,185	0/0:15,0:15:35.67:0,36,591	0/0:13,0:13:14.88:0,15,527	0/0:20,0:20:41.11:0,41,656	0/0:19,0:18:39.10:0,39,784	0/0:18,0:18:42:0,42,728	0/0:6,0:6:14.78:0,15,226	0/0:11,0:11:20.95:0,21,292	0/1:15,0:12:23.98:145,0,24	1/1:26,0:24:19.87:526,20,0	1/1:22,0:20:5.81:40,6,0	0/0:9,0:9:12.04:0,12,222	0/0:15,0:13:18:0,18,191	0/0:20,0:20:39.29:0,39,577	0/0:14,0:14:23.88:0,24,447	0/0:26,0:23:51.32:0,51,682	0/1:5,21:30:9.54:165,0,10	0/0:7,0:6:15.52:0,16,303
chr10	31208462	.	CTGTGTG	C	6278.99	PASS	AB=0.740;AC=24;AF=0.429;AN=56;BaseQRankSum=-4.262;DP=519;FS=7.934;HRun=0;HaplotypeScore=149.0288;InbreedingCoeff=0.0538;MQ=51.46;MQ0=20;MQRankSum=1.594;QD=19.26;ReadPosRankSum=0.805;VQSLOD=4.1920;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:16,16:31:7.30:71,0,7	0/0:2,4:7:1.93:0,2,8	0/0:15,0:7:21.05:0,21,484	0/0:18,0:7:12.28:0,12,175	0/1:15,2:17:12.13:305,0,12	1/1:16,2:21:10.03:610,10,0	0/1:5,7:12:23.36:43,0,23	1/1:4,24:28:68.99:1131,69,0	0/0:20,0:19:38.11:0,38,785	1/1:11,1:26:15.21:842,15,0	0/1:8,1:19:8.75:48,0,9	0/1:12,1:15:97.25:230,0,97	0/1:9,0:14:60.30:274,0,60	0/1:14,3:20:43.26:387,0,43	0/0:17,0:16:36.11:0,36,914	0/1:12,2:18:99:385,0,108	0/1:4,0:6:9.53:91,0,10	0/1:6,0:11:31.77:32,0,63	0/0:17,0:14:38.92:0,39,668	0/0:28,0:26:37.29:0,37,813	0/0:11,0:24:2.51:0,3,29	1/1:7,0:9:9.03:174,9,0	0/0:10,3:13:8.42:0,8,43	0/1:19,0:20:41.59:329,0,42	1/1:15,1:16:6.33:500,6,0	0/1:12,13:23:25.02:584,0,25	0/0:30,0:30:17.56:0,18,325	1/1:7,0:6:6.36:242,6,0
chr10	31208664	.	T	TTC	19129.55	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-13.232;DP=726;FS=5.668;HRun=0;HaplotypeScore=101.0782;InbreedingCoeff=0.9945;MQ=61.90;MQ0=4;MQRankSum=0.349;QD=38.96;ReadPosRankSum=3.463;VQSLOD=6.4598;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,51:55:99:2220,125,0	1/1:0,11:11:30.10:549,30,0	0/0:28,0:22:40.90:0,41,583	0/0:32,0:27:43.39:0,43,661	1/1:2,18:20:51.17:900,51,0	1/1:4,18:22:18.24:571,18,0	1/1:0,26:28:33.11:603,33,0	1/1:0,41:42:99:1903,111,0	0/0:23,0:22:60.16:0,60,833	1/1:0,34:34:99:1770,102,0	1/1:1,18:20:39.13:715,39,0	1/1:0,32:31:57.19:1009,57,0	1/1:1,10:12:30.10:549,30,0	1/1:1,6:8:15.05:275,15,0	0/0:27,0:26:69.22:0,69,971	1/1:0,22:22:39.13:714,39,0	1/1:2,21:23:48.08:841,48,0	1/1:1,17:18:45.15:824,45,0	0/0:27,0:24:60.20:0,60,840	0/0:23,0:23:57.17:0,57,782	0/0:55,0:54:99:0,132,1754	1/1:2,20:22:48.16:879,48,0	1/1:0,26:26:60.20:1078,60,0	1/1:2,27:28:47.38:878,47,0	1/1:0,22:23:57.20:1045,57,0	1/1:3,31:34:87.20:1478,87,0	0/0:19,0:17:51.17:0,51,712	1/1:0,9:9:18.06:330,18,0
chr10	31208759	.	G	GTCTC	8258.38	PASS	AB=0.883;AC=44;AF=0.815;AN=54;BaseQRankSum=-0.460;DP=791;FS=6.480;HRun=0;HaplotypeScore=145.4221;InbreedingCoeff=-0.0419;MQ=44.13;MQ0=39;MQRankSum=-1.108;QD=12.22;ReadPosRankSum=-0.484;VQSLOD=4.0839;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:42,6:50:35.04:1047,0,35	0/1:11,1:13:7.05:299,0,7	0/0:92,0:6:3.01:0,3,37	0/1:107,0:17:1.36:17,0,1	1/1:18,2:20:14.67:228,15,0	1/1:15,1:16:17.96:275,18,0	1/1:12,11:25:6.23:76,6,0	0/1:33,0:33:21.99:253,0,22	0/1:7,13:21:40.17:92,0,40	1/1:24,0:24:22.82:185,23,0	1/1:24,0:24:11.97:166,12,0	1/1:20,4:23:18.68:398,19,0	0/1:14,0:14:27.73:300,0,28	1/1:9,1:10:6.02:144,6,0	0/1:14,1:16:50.37:367,0,50	1/1:26,4:32:35.37:670,35,0	1/1:23,4:27:28.85:448,29,0	1/1:19,2:21:23.23:330,23,0	1/1:8,0:16:9.02:118,9,0	1/1:10,0:12:0.89:2,1,0	./.	1/1:22,4:26:13.60:296,14,0	0/1:19,5:23:24.90:425,0,25	1/1:32,0:34:27.12:361,27,0	1/1:15,1:16:6.76:146,7,0	1/1:37,2:37:70.27:1265,70,0	1/1:3,0:16:12.04:192,12,0	1/1:8,0:8:8.77:158,9,0
chr10	31208786	.	C	CGTGTGT	4526.14	PASS	AB=0.939;AC=45;AF=0.865;AN=52;BaseQRankSum=-4.477;DP=604;FS=0.000;HRun=0;HaplotypeScore=181.1401;InbreedingCoeff=0.1381;MQ=39.79;MQ0=21;MQRankSum=0.992;QD=8.26;ReadPosRankSum=1.534;VQSLOD=3.6911;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:31,3:42:7.34:317,0,7	1/1:14,1:16:9.02:191,9,0	./.	0/1:32,0:2:0:0,0,0	1/1:23,0:23:5.59:71,6,0	1/1:12,0:14:14.35:209,14,0	1/1:22,0:23:5.81:109,6,0	1/1:34,0:33:39.05:606,39,0	1/1:17,0:18:6.02:134,6,0	1/1:22,0:21:18.05:372,18,0	1/1:10,0:11:5.03:31,5,0	0/1:25,3:28:18.69:381,0,19	1/1:16,0:16:8.95:99,9,0	1/1:10,0:9:6.02:168,6,0	1/1:20,0:21:13.61:150,14,0	1/1:26,2:27:2.14:22,2,0	1/1:22,0:23:17.20:244,17,0	1/1:15,0:16:11.87:257,12,0	1/1:16,0:14:3.90:73,4,0	0/0:8,2:10:0:0,0,0	0/0:14,0:13:0:0,0,0	1/1:24,2:28:10.92:304,11,0	1/1:18,1:20:7.60:53,8,0	1/1:30,1:35:13.80:181,14,0	1/1:14,3:17:4.72:120,5,0	1/1:31,1:32:21.06:342,21,0	1/1:13,0:13:8.98:91,9,0	./.
chr10	31209410	.	CTCAGTCAG	C	2701.07	PASS	AB=0.795;AC=29;AF=0.604;AN=48;BaseQRankSum=1.873;DP=676;FS=13.143;HRun=0;HaplotypeScore=158.7459;InbreedingCoeff=0.6288;MQ=62.49;MQ0=27;MQRankSum=-7.117;QD=8.66;ReadPosRankSum=-1.378;VQSLOD=1.6522;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:10,10:20:12.04:286,12,0	1/1:8,3:11:6.02:130,6,0	./.	0/0:51,0:26:0:0,0,0	./.	0/1:13,0:19:3.91:4,0,176	0/1:16,1:22:18.30:48,0,18	./.	0/0:24,0:26:39.12:0,39,1408	0/0:26,0:34:32.95:0,33,332	0/1:5,0:6:0:0,0,0	1/1:19,7:26:9.03:220,9,0	1/1:14,6:19:6.02:147,6,0	1/1:17,8:25:6.02:129,6,0	0/0:45,0:45:69.24:0,69,2562	1/1:18,3:21:9.03:221,9,0	1/1:18,11:29:9.03:221,9,0	1/1:12,9:20:18.06:441,18,0	0/0:17,0:13:9.02:0,9,213	0/0:15,0:16:15.05:0,15,405	0/0:38,0:47:36.12:0,36,1014	1/1:11,3:14:6.02:146,6,0	1/1:10,2:12:3.01:73,3,0	1/1:18,9:26:8.76:170,9,0	1/1:6,6:12:15.05:367,15,0	1/1:22,4:26:12.04:269,12,0	0/0:14,0:22:12.04:0,12,404	./.
chr10	31209566	.	C	CTG	517.94	PASS	AB=1.000;AC=31;AF=0.620;AN=50;BaseQRankSum=1.657;DP=629;FS=0.000;HRun=0;HaplotypeScore=116.8785;InbreedingCoeff=0.2068;MQ=60.91;MQ0=21;MQRankSum=-0.382;QD=1.39;ReadPosRankSum=-0.515;VQSLOD=1.9031;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:23:2.55:0,3,11	0/1:5,0:5:0.05:0,0,0	./.	./.	1/1:12,0:11:2.97:20,3,0	0/1:16,0:16:13.71:17,0,14	1/1:31,0:31:5.75:30,6,0	./.	0/1:22,0:21:8.66:9,0,38	0/0:25,0:23:2.21:0,2,8	0/1:3,0:2:0:0,0,0	1/1:33,0:31:9.96:94,10,0	1/1:25,0:25:5.96:43,6,0	1/1:25,0:24:6.22:47,6,0	0/0:20,0:22:1.86:0,2,6	1/1:20,0:20:6.41:42,6,0	0/1:28,0:27:22.40:52,0,22	0/1:25,0:22:12.98:16,0,13	0/0:17,0:16:4.78:0,5,18	0/1:12,0:13:2.78:3,0,21	0/0:84,0:83:29.17:0,29,268	1/1:16,0:16:2.99:23,3,0	1/1:13,0:13:1.06:10,1,0	1/1:33,0:33:12.50:127,12,0	1/1:12,4:16:3.48:38,3,0	1/1:28,0:27:4.56:35,5,0	0/0:10,0:10:0:0,0,0	1/1:7,0:7:7.32:46,7,0
chr10	31209610	.	GTT	G	4572.44	PASS	AB=0.973;AC=41;AF=0.732;AN=56;BaseQRankSum=1.047;DP=599;FS=16.383;HRun=3;HaplotypeScore=116.6994;InbreedingCoeff=0.0538;MQ=49.10;MQ0=33;MQRankSum=5.462;QD=8.24;ReadPosRankSum=2.104;VQSLOD=0.6426;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:28,2:28:50.80:447,51,0	1/1:9,0:9:20.89:163,21,0	0/0:14,0:1:2.90:0,3,16	0/0:22,0:3:3.85:0,4,22	1/1:22,0:20:24.27:235,24,0	0/1:15,0:13:10.60:105,0,11	1/1:23,0:23:50.32:403,50,0	0/1:15,0:14:34.98:109,0,35	0/1:15,0:13:20.86:21,0,110	0/1:17,8:24:99:101,0,205	0/0:8,0:6:6.40:0,6,36	1/1:28,0:26:42.38:392,42,0	1/1:18,0:16:13.91:231,14,0	1/1:22,0:20:17.95:134,18,0	0/1:22,0:21:44.58:45,0,167	1/1:20,0:20:52.09:395,52,0	1/1:29,0:26:39.46:332,39,0	1/1:21,0:19:37.66:305,38,0	0/1:15,0:12:15.73:16,0,165	0/1:19,0:19:23.84:24,0,200	0/1:73,0:72:11.74:12,0,657	1/1:19,0:19:20.64:231,21,0	1/1:16,0:16:6.57:183,7,0	1/1:38,0:38:24.29:191,24,0	1/1:14,0:11:1.66:65,2,0	1/1:25,0:24:17.29:283,17,0	0/1:12,0:11:19.04:19,0,160	1/1:10,0:9:12.25:133,12,0
chr10	31211698	.	TTTTG	T	349.86	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.720;DP=709;FS=6.677;HRun=0;HaplotypeScore=109.9285;InbreedingCoeff=0.9796;MQ=66.55;MQ0=2;MQRankSum=0.084;QD=18.41;ReadPosRankSum=2.330;VQSLOD=2.6080;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:98.07:0,98,2397	0/0:10,0:10:24.08:0,24,584	0/0:24,0:22:24.97:0,25,579	0/0:30,0:25:42.12:0,42,832	0/0:22,0:22:60.21:0,60,1444	0/0:18,0:17:39.13:0,39,906	0/0:24,0:24:50.53:0,51,1101	0/0:30,0:30:45.15:0,45,1077	1/1:5,14:19:27.09:444,27,0	0/0:30,0:30:75.26:0,75,1742	0/0:26,0:26:66.23:0,66,1516	0/0:29,0:29:78.27:0,78,1876	0/0:19,0:19:48.16:0,48,1160	0/0:21,0:21:54.18:0,54,1257	0/0:30,0:30:78.27:0,78,1907	0/0:17,0:17:42.14:0,42,1025	0/0:35,0:35:90.31:0,90,2155	0/0:31,0:31:75.21:0,75,1779	0/0:21,0:21:36.11:0,36,807	0/0:23,0:23:48.15:0,48,1116	0/0:28,0:28:60.20:0,60,1426	0/0:20,0:20:54.19:0,54,1300	0/0:17,0:17:42.14:0,42,995	0/0:36,0:35:75.21:0,75,1645	0/0:21,0:21:54.19:0,54,1278	0/0:31,0:30:60.21:0,60,1448	0/0:43,0:42:90.31:0,90,2106	0/0:9,0:9:15.05:0,15,362
chr10	31212122	.	G	GGTGT	2430.92	PASS	AB=0.849;AC=14;AF=0.250;AN=56;BaseQRankSum=-0.503;DP=905;FS=9.077;HRun=0;HaplotypeScore=161.6310;InbreedingCoeff=0.5880;MQ=65.07;MQ0=21;MQRankSum=-3.963;QD=7.72;ReadPosRankSum=-3.258;VQSLOD=1.7127;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:41:69.11:0,69,932	0/0:14,0:14:24:0,24,372	1/1:46,0:24:2.96:19,3,0	0/1:41,0:21:11.03:13,0,11	0/0:24,0:27:39.12:0,39,565	0/1:22,0:27:11.81:12,0,436	0/0:32,0:37:43.40:0,43,693	0/0:30,0:28:15.88:0,16,288	0/0:31,0:32:45.12:0,45,622	1/1:23,0:26:22.70:355,23,0	1/1:12,1:21:16.56:272,17,0	0/0:33,0:33:39.61:0,40,704	0/0:25,0:25:45.24:0,45,681	0/0:31,0:34:47:0,47,815	0/0:45,0:51:84.97:0,85,1196	0/0:32,0:35:78.15:0,78,1107	0/0:25,0:32:63.09:0,63,804	0/0:32,0:32:25.22:0,25,719	0/1:12,4:17:43.73:219,0,44	1/1:13,10:24:27:455,27,0	0/1:35,33:76:99:692,0,102	0/0:25,0:25:52.04:0,52,734	0/0:17,0:20:33.08:0,33,461	0/0:42,0:45:67.56:0,68,1088	0/0:26,0:26:46.90:0,47,756	0/0:35,0:35:33.43:0,33,532	1/1:11,22:33:26.80:572,27,0	0/0:13,0:13:15.05:0,15,236
chr10	31213431	.	T	TC	3110.19	PASS	AC=48;AF=1.000;AN=48;DP=145;FS=0.000;HRun=2;HaplotypeScore=19.0784;InbreedingCoeff=-0.0858;MQ=50.95;MQ0=0;QD=22.87;VQSLOD=2.9891;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,9:9:15.05:215,15,0	1/1:0,4:4:9.03:129,9,0	./.	./.	./.	1/1:1,4:5:6.02:86,6,0	1/1:0,4:4:12.04:172,12,0	1/1:0,9:9:27.09:386,27,0	1/1:1,4:5:9.03:129,9,0	1/1:0,8:8:24.08:343,24,0	1/1:0,2:2:3.01:43,3,0	1/1:0,2:2:6.02:78,6,0	1/1:1,8:9:15.05:215,15,0	1/1:1,3:4:3.01:43,3,0	1/1:0,5:5:9.03:129,9,0	1/1:1,3:4:3.01:43,3,0	1/1:1,7:8:9.03:128,9,0	1/1:0,5:5:9.03:129,9,0	1/1:1,2:3:6.02:86,6,0	1/1:0,7:7:2.97:20,3,0	1/1:2,7:9:15.05:207,15,0	1/1:0,7:7:12.04:171,12,0	1/1:0,2:3:3.01:43,3,0	1/1:2,12:14:3.01:43,3,0	1/1:1,1:2:3.01:43,3,0	1/1:0,5:5:15.05:216,15,0	1/1:0,3:3:6.02:86,6,0	./.
chr10	31215912	.	G	GGAT	4640.12	PASS	AB=0.785;AC=18;AF=0.321;AN=56;BaseQRankSum=0.756;DP=728;FS=32.183;HRun=0;HaplotypeScore=195.6736;InbreedingCoeff=-0.3111;MQ=31.47;MQ0=63;MQRankSum=-3.733;QD=10.40;ReadPosRankSum=2.982;VQSLOD=3.0517;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:25,9:29:99:159,0,254	0/1:6,1:7:49.25:49,0,122	0/0:20,0:4:12.04:0,12,185	0/0:20,0:4:12.04:0,12,183	1/1:28,9:30:7.77:185,8,0	0/1:18,6:18:56.60:350,0,57	0/1:19,4:18:99:144,0,170	0/1:24,8:19:99:588,0,140	0/0:39,0:31:66.21:0,66,1020	0/0:50,0:45:99:0,105,1379	0/0:20,0:20:15.96:0,16,204	0/1:14,13:26:99:417,0,285	0/1:13,10:21:99:505,0,151	0/1:12,9:19:69.64:483,0,70	0/0:19,0:16:23.07:0,23,345	0/1:21,6:24:99:223,0,339	0/1:15,7:21:99:168,0,223	0/1:12,3:14:45.67:46,0,169	0/0:18,0:15:36.12:0,36,557	0/0:20,0:17:10.42:0,10,318	0/0:57,0:48:99:0,102,1574	0/1:17,8:24:96.59:525,0,97	0/1:17,11:23:2.74:340,0,3	0/1:23,4:24:42.81:43,0,168	0/1:38,6:34:99:160,0,210	0/1:19,8:25:99:256,0,388	0/0:18,0:17:33.10:0,33,503	0/0:1,0:1:3.01:0,3,41
chr10	31215959	.	TGGAA	T	842.79	PASS	AB=0.991;AC=23;AF=0.426;AN=54;BaseQRankSum=5.257;DP=619;FS=10.388;HRun=0;HaplotypeScore=162.1735;InbreedingCoeff=-0.3488;MQ=30.18;MQ0=47;MQRankSum=-2.814;QD=2.04;ReadPosRankSum=-4.018;VQSLOD=0.8694;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:23:2.47:2,0,169	0/0:4,0:4:3.83:0,4,20	0/0:51,0:9:3:0,3,198	0/0:55,0:16:24.79:0,25,371	1/1:22,0:21:3.01:19,3,0	0/1:17,0:13:54.60:55,0,86	0/0:14,0:10:5.91:0,6,216	0/1:9,0:5:6.62:7,0,60	0/1:29,0:21:16.86:17,0,715	0/1:38,5:36:99:308,0,610	0/1:13,0:13:7.47:42,0,7	0/1:20,1:19:36.72:37,0,129	0/1:14,0:12:24.98:25,0,212	1/1:15,0:12:1.54:28,2,0	0/1:21,0:18:99:216,0,472	0/1:21,0:16:12.36:12,0,234	0/1:12,0:10:12.35:24,0,12	0/1:13,0:12:49.72:50,0,66	0/1:24,0:17:50.70:51,0,619	0/0:26,0:23:6.94:0,7,241	0/0:37,0:33:66:0,66,1527	0/1:26,0:22:8.37:8,0,49	1/1:18,0:17:11.74:52,12,0	0/1:22,0:19:17.42:17,0,75	0/1:33,0:21:10.90:11,0,17	0/1:15,0:13:16.15:16,0,228	0/0:17,0:16:32.30:0,32,506	./.
chr10	31219245	.	G	GATGGAGAGTGGGTGTC	18195.26	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-8.386;DP=636;FS=0.888;HRun=0;HaplotypeScore=252.1654;InbreedingCoeff=0.9926;MQ=81.72;MQ0=1;MQRankSum=-13.063;QD=107.03;ReadPosRankSum=-0.522;VQSLOD=3.9326;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:79.27:0,79,3966	0/0:8,0:8:24.08:0,24,900	0/0:27,0:27:69.23:0,69,2275	0/0:34,0:32:52:0,52,2077	1/1:16,7:24:23.84:1832,24,0	0/0:18,0:18:42.14:0,42,1837	0/0:24,0:24:63.22:0,63,2678	0/0:27,0:27:75.26:0,75,2737	0/0:27,0:27:72.23:0,72,3078	1/1:8,10:30:68.68:4759,69,0	1/1:1,11:17:33.11:2557,33,0	0/0:21,0:21:42.14:0,42,1669	0/0:21,0:20:51.17:0,51,2137	0/0:22,0:22:48.14:0,48,1845	0/0:15,0:15:42.14:0,42,1728	0/0:22,0:22:60.21:0,60,2602	0/0:27,0:27:63.22:0,63,2641	0/0:22,0:22:60.21:0,60,2491	1/1:6,4:19:45.13:2397,45,0	1/1:7,5:20:21.04:1522,21,0	1/1:11,3:25:12.51:771,13,0	0/0:19,0:19:48.16:0,48,2009	0/0:16,0:16:42.14:0,42,1923	0/0:33,0:33:75.26:0,75,3112	0/0:9,0:9:21.07:0,21,825	0/0:15,0:15:42.14:0,42,1725	1/1:9,14:35:60.21:4357,60,0	0/0:21,0:21:63.21:0,63,2411
chr10	31219305	.	AT	A	3953.90	PASS	AB=0.713;AC=34;AF=0.607;AN=56;BaseQRankSum=2.429;DP=557;FS=5.124;HRun=14;HaplotypeScore=76.9382;InbreedingCoeff=0.6198;MQ=72.73;MQ0=2;MQRankSum=1.349;QD=10.22;ReadPosRankSum=6.350;VQSLOD=3.2096;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:13,29:42:29.32:477,29,0	1/1:2,5:7:14.84:103,15,0	0/0:26,0:16:1.37:0,1,112	0/1:16,0:9:8.49:13,0,8	1/1:7,18:25:40.16:285,40,0	1/1:3,14:18:40.68:273,41,0	0/1:5,9:16:2.99:110,0,3	0/1:11,12:26:12.08:169,0,12	0/0:19,1:22:27.24:0,27,370	0/0:13,0:13:13.09:0,13,248	0/0:9,0:10:20.95:0,21,181	1/1:3,20:24:34.76:232,35,0	1/1:5,12:17:5.72:143,6,0	1/1:9,19:30:0.03:248,0,0	0/0:20,0:20:30.85:0,31,266	1/1:7,14:21:13.26:186,13,0	1/1:4,21:26:30.89:342,31,0	1/1:1,16:17:41.60:284,42,0	0/0:25,1:27:39.97:0,40,449	0/0:12,0:13:26.83:0,27,226	0/0:14,0:14:21:0,21,187	1/1:5,7:14:20.68:133,21,0	1/1:5,16:22:30.60:210,31,0	1/1:1,16:18:37.71:253,38,0	1/1:2,8:10:26.77:185,27,0	0/1:8,10:20:16.01:177,0,16	0/0:24,1:25:40.54:0,41,433	1/1:6,9:18:2.03:132,2,0
chr10	31219593	.	CGTGCGTGTGTGCGT	C	2787.36	PASS	AB=0.991;AC=15;AF=0.278;AN=54;BaseQRankSum=-0.202;DP=646;FS=0.939;HRun=0;HaplotypeScore=229.9093;InbreedingCoeff=0.4432;MQ=62.46;MQ0=16;MQRankSum=-0.237;QD=12.23;ReadPosRankSum=1.828;VQSLOD=2.2395;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:32:21.08:0,21,391	0/0:3,0:10:8.16:0,8,109	0/0:24,0:20:35.12:0,35,538	0/1:26,0:16:5.66:6,0,181	0/0:18,0:17:6.02:0,6,85	0/1:17,0:17:23.20:23,0,407	0/0:34,0:33:25.86:0,26,271	0/1:26,0:25:48.66:49,0,79	0/0:22,0:22:59.79:0,60,1766	1/1:3,23:27:69.22:1410,69,0	1/1:12,0:12:21:210,21,0	0/0:36,0:36:27.23:0,27,385	0/0:27,0:28:18.21:0,18,235	0/1:21,0:22:12.96:13,0,118	0/0:22,0:22:54.17:0,54,1725	0/0:17,0:19:21.48:0,21,270	0/0:34,0:32:9.46:0,9,175	0/0:24,0:24:1.09:0,1,831	1/1:14,0:13:33.94:324,34,0	./.	1/1:43,0:41:18.13:876,18,0	0/0:14,0:13:5.61:0,6,41	0/0:20,0:20:10.93:0,11,98	0/0:42,0:41:5.56:0,6,110	0/0:14,0:14:11.93:0,12,210	0/1:29,0:28:1.74:2,0,524	1/1:12,0:11:5.85:45,6,0	0/0:10,0:9:6.71:0,7,271
chr10	31219595	.	TGCGTGTGTGC	T	3998.98	PASS	AB=1.000;AC=27;AF=0.500;AN=54;BaseQRankSum=2.189;DP=633;FS=4.624;HRun=0;HaplotypeScore=193.1727;InbreedingCoeff=-0.0848;MQ=62.17;MQ0=16;MQRankSum=-0.435;QD=8.13;ReadPosRankSum=0.485;VQSLOD=2.3540;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:31:74.85:75,0,122	0/1:10,0:10:14.25:14,0,19	0/0:22,0:18:35.12:0,35,538	0/1:26,0:16:5.66:6,0,181	1/1:18,0:17:4.41:15,4,0	0/1:18,0:17:63.54:64,0,184	0/1:33,0:32:62.74:101,0,63	0/1:27,0:26:58.32:58,0,79	0/0:22,0:22:59.80:0,60,1363	1/1:27,0:27:61.57:1068,62,0	1/1:12,0:12:21:210,21,0	0/0:35,0:35:21.44:0,21,98	0/1:28,0:28:24.83:56,0,25	0/1:18,0:18:14.82:88,0,15	0/0:22,0:22:54.17:0,54,1304	0/1:20,0:20:28.36:28,0,44	0/1:32,0:30:24.99:25,0,58	0/1:25,0:24:99:108,0,245	1/1:13,0:12:36.07:510,36,0	./.	1/1:43,0:41:77.35:1246,77,0	0/0:14,0:13:5.60:0,6,41	0/1:19,0:19:0.09:0,0,54	0/1:42,0:41:3.43:19,0,3	0/0:14,0:14:11.93:0,12,161	0/1:28,0:27:84.50:84,0,255	1/1:1,9:9:6.02:186,6,0	0/1:10,0:9:38.49:38,0,119
chr10	31219599	.	TGTGTGC	T	5605.22	PASS	AB=0.931;AC=40;AF=0.741;AN=54;BaseQRankSum=0.572;DP=628;FS=5.107;HRun=0;HaplotypeScore=155.4606;InbreedingCoeff=0.3694;MQ=56.70;MQ0=18;MQRankSum=-1.863;QD=10.28;ReadPosRankSum=2.223;VQSLOD=3.5141;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:35,1:34:48.87:521,49,0	1/1:8,1:9:6.49:114,6,0	0/0:15,0:11:23.89:0,24,230	0/1:21,0:12:13.08:13,0,15	1/1:5,13:17:6.01:60,6,0	1/1:15,1:15:28.72:269,29,0	1/1:34,0:33:44.62:645,45,0	1/1:28,0:27:46.39:447,46,0	0/0:21,0:21:56.42:0,56,790	1/1:27,0:27:44.90:501,45,0	0/1:12,0:12:14.78:34,0,15	1/1:3,30:33:17.10:345,17,0	1/1:3,24:27:15.24:277,15,0	0/1:20,0:19:22.22:129,0,22	0/0:23,0:23:50.88:0,51,669	1/1:6,12:18:14.84:258,15,0	1/1:5,32:35:9.03:193,9,0	1/1:24,0:23:58.16:549,58,0	0/1:12,0:11:17.39:144,0,17	./.	1/1:48,0:46:12.75:469,13,0	0/1:4,10:13:0:0,0,0	1/1:1,16:17:1.37:5,1,0	1/1:3,42:44:6.02:138,6,0	0/0:3,10:13:2.99:0,3,24	1/1:28,0:27:19.48:300,19,0	1/1:11,0:9:6.02:82,6,0	0/1:10,0:9:16.01:110,0,16
chr10	31219601	.	TGTGC	T	4754.93	PASS	AB=0.983;AC=42;AF=0.778;AN=54;BaseQRankSum=2.357;DP=631;FS=4.299;HRun=0;HaplotypeScore=144.9907;InbreedingCoeff=0.4557;MQ=55.98;MQ0=20;MQRankSum=-1.213;QD=8.79;ReadPosRankSum=1.530;VQSLOD=3.8134;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:39,0:36:32.68:456,33,0	1/1:9,0:9:6.02:67,6,0	0/0:15,0:11:23.89:0,24,230	0/1:19,0:10:13.08:13,0,15	1/1:18,0:17:5.95:45,6,0	1/1:16,0:15:28.59:219,29,0	1/1:34,0:33:65.40:579,65,0	1/1:26,0:26:59.12:466,59,0	0/0:23,0:23:56.28:0,56,559	1/1:27,0:27:44:443,44,0	1/1:11,0:11:6.41:44,6,0	1/1:33,0:33:17.10:187,17,0	1/1:27,1:28:17.09:189,17,0	0/1:20,0:19:28.91:76,0,29	0/0:24,0:24:50.82:0,51,544	1/1:17,0:17:15.02:156,15,0	1/1:37,0:35:9.01:96,9,0	1/1:23,2:24:56.64:478,57,0	0/1:14,0:13:2.73:128,0,3	./.	1/1:47,0:45:0.97:486,1,0	0/1:13,1:13:0:0,0,0	0/0:17,0:17:0.18:0,0,1	1/1:45,0:44:6.02:73,6,0	1/1:13,0:12:0.47:1,0,0	1/1:27,0:26:39.98:314,40,0	1/1:11,0:9:5.99:53,6,0	1/1:9,1:9:3.37:184,3,0
chr10	31219603	.	TGC	T	4624.62	PASS	AB=0.914;AC=39;AF=0.722;AN=54;BaseQRankSum=2.141;DP=624;FS=1.149;HRun=0;HaplotypeScore=131.7154;InbreedingCoeff=0.4834;MQ=55.10;MQ0=20;MQRankSum=-2.970;QD=8.95;ReadPosRankSum=1.422;VQSLOD=4.2125;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:37,1:35:15.73:459,16,0	1/1:9,0:9:5.91:39,6,0	0/0:13,0:9:23.89:0,24,230	0/1:18,0:10:13.08:13,0,15	0/0:18,0:17:1.06:0,1,4	1/1:15,1:15:21.88:236,22,0	1/1:31,5:35:70.77:573,71,0	1/1:24,0:23:61.98:494,62,0	0/0:23,0:23:22.50:0,23,468	1/1:27,0:27:68:482,68,0	1/1:10,0:10:9.41:69,9,0	1/1:34,1:35:17.50:152,18,0	1/1:28,0:28:16.24:103,16,0	0/1:5,15:19:62.29:69,0,62	0/0:25,0:25:21.30:0,21,392	1/1:17,0:17:2.54:54,3,0	1/1:35,0:33:8.98:86,9,0	1/1:24,1:24:45.52:387,46,0	0/1:13,0:12:12.48:145,0,12	./.	1/1:47,0:45:10.07:554,10,0	0/1:14,0:13:0:0,0,0	0/0:17,0:17:2.63:0,3,14	1/1:43,0:42:6:57,6,0	0/1:13,0:12:0:0,0,0	1/1:3,25:27:51.54:431,52,0	1/1:11,0:9:5.86:35,6,0	1/1:7,3:9:21.80:185,22,0
chr10	31219605	.	C	CGT	841.18	PASS	AB=0.985;AC=25;AF=0.500;AN=50;BaseQRankSum=-3.190;DP=626;FS=1.706;HRun=0;HaplotypeScore=149.2382;InbreedingCoeff=-0.2477;MQ=54.46;MQ0=22;MQRankSum=0.787;QD=1.59;ReadPosRankSum=-4.241;VQSLOD=1.4660;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:36,0:33:40.36:129,0,40	0/0:8,0:8:5.60:0,6,29	./.	./.	0/0:18,0:17:2.90:0,3,17	0/1:18,0:18:0.67:49,0,1	1/1:35,0:34:17.23:158,17,0	1/1:23,0:22:1.72:4,2,0	0/1:19,1:23:24.26:24,0,110	0/1:27,0:27:29.62:31,0,30	0/1:8,0:8:0:0,0,0	0/1:34,0:33:8.38:8,0,29	0/1:28,0:28:11.38:11,0,32	0/1:19,0:19:10.60:11,0,51	0/1:17,7:25:34.59:77,0,35	0/0:17,0:17:13.75:0,14,63	0/1:34,0:32:13.73:33,0,14	0/1:27,0:26:36.72:116,0,37	0/1:17,0:16:17.98:48,0,18	./.	0/1:49,0:47:43.34:112,0,43	0/1:16,0:15:0:0,0,0	0/0:17,0:17:2.69:0,3,13	1/1:44,0:43:4.67:25,5,0	0/1:13,0:11:0:0,0,0	1/1:28,1:28:1.99:67,2,0	0/1:11,0:9:1.39:23,0,1	0/1:11,0:10:8.86:44,0,9
chr10	31220401	.	C	CT	6775.97	PASS	AB=0.629;AC=40;AF=0.714;AN=56;BaseQRankSum=-7.267;DP=549;FS=0.000;HRun=12;HaplotypeScore=63.2127;InbreedingCoeff=0.2525;MQ=73.19;MQ0=4;MQRankSum=-0.397;QD=14.76;ReadPosRankSum=0.279;VQSLOD=5.4231;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:14,20:35:3.02:471,0,3	0/1:5,8:13:3.88:128,0,4	0/0:33,1:21:28.52:0,29,228	0/0:16,0:8:0.93:0,1,48	1/1:8,19:27:29.52:411,30,0	0/1:5,12:19:6.99:226,0,7	1/1:7,9:17:20.07:328,20,0	1/1:9,16:25:3.70:330,4,0	0/0:23,1:25:27.76:0,28,352	0/1:9,10:20:14.83:203,0,15	1/1:3,9:12:26.94:243,27,0	1/1:3,18:22:29.01:430,29,0	0/1:8,9:17:25.73:99,0,26	1/1:3,9:12:18.03:175,18,0	0/0:11,0:13:28.88:0,29,203	0/1:8,11:21:8.80:257,0,9	1/1:9,17:27:23:372,23,0	1/1:3,17:22:18.48:404,18,0	0/1:10,12:22:39.61:266,0,40	1/1:3,18:21:7.10:357,7,0	1/1:2,6:8:6.01:58,6,0	1/1:7,14:21:1.21:326,1,0	1/1:4,14:18:33.48:312,33,0	0/1:3,5:8:3.88:128,0,4	1/1:5,12:17:24.04:234,24,0	1/1:3,16:20:47.70:429,48,0	1/1:2,19:21:36.06:350,36,0	1/1:3,9:13:26.84:239,27,0
chr10	31220809	.	C	CTT	7701.40	PASS	AB=0.716;AC=43;AF=0.768;AN=56;BaseQRankSum=-3.773;DP=625;FS=2.881;HRun=11;HaplotypeScore=76.4855;InbreedingCoeff=0.6969;MQ=67.36;MQ0=18;MQRankSum=-1.214;QD=15.37;ReadPosRankSum=2.108;VQSLOD=3.7418;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,33:45:49.63:633,50,0	1/1:4,0:9:5.98:49,6,0	0/0:38,0:14:5.92:0,6,56	0/1:36,0:17:1.17:1,0,55	1/1:5,19:22:47.46:551,47,0	1/1:5,18:24:48.12:661,48,0	1/1:3,13:17:30.10:429,30,0	1/1:9,21:30:60.41:710,60,0	0/0:21,0:21:44.97:0,45,423	0/0:22,0:22:51.01:0,51,493	0/0:21,0:21:54.03:0,54,506	1/1:3,10:12:12.04:173,12,0	1/1:1,9:12:17.54:196,18,0	1/1:2,9:11:12.04:171,12,0	0/0:20,0:20:44.79:0,45,399	1/1:5,14:19:21.07:304,21,0	1/1:9,26:39:59.64:800,60,0	1/1:3,23:33:34.06:367,34,0	1/1:11,0:12:10.47:48,10,0	1/1:7,0:26:29.77:103,30,0	1/1:3,0:13:3.34:29,3,0	1/1:2,9:11:24.08:340,24,0	0/1:6,13:20:2.07:286,0,2	1/1:5,14:19:30.10:434,30,0	1/1:7,7:14:33.08:422,33,0	1/1:23,6:29:56.50:607,56,0	0/1:4,0:19:15.83:73,0,16	1/1:9,8:16:23.57:313,24,0
chr10	31226117	.	GT	G	15935.02	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=3.261;DP=647;FS=0.000;HRun=6;HaplotypeScore=69.3009;InbreedingCoeff=0.9902;MQ=87.51;MQ0=0;MQRankSum=-6.790;QD=28.66;ReadPosRankSum=3.175;VQSLOD=5.4528;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,42:46:99:1274,120,0	1/1:0,10:10:27.07:290,27,0	0/0:20,0:20:51.14:0,51,654	0/0:25,0:26:33.84:0,34,755	1/1:0,28:28:66.16:708,66,0	1/1:1,23:24:63.16:677,63,0	1/1:3,14:17:42.10:451,42,0	1/1:4,23:27:66.12:685,66,0	0/0:17,0:17:51.17:0,51,671	1/1:1,23:24:69.14:725,69,0	1/1:0,13:13:39.10:418,39,0	1/1:1,32:33:90.23:967,90,0	1/1:0,25:25:69.17:741,69,0	1/1:2,18:20:54.14:580,54,0	0/0:28,0:28:81.25:0,81,1051	1/1:1,18:19:11.65:476,12,0	1/1:2,25:27:75.19:806,75,0	1/1:0,14:14:42.11:451,42,0	1/1:1,18:19:53.12:533,53,0	1/1:0,16:16:45.11:483,45,0	1/1:2,32:34:90.23:967,90,0	1/1:1,19:20:57.14:612,57,0	1/1:1,14:15:36.09:386,36,0	1/1:1,32:33:87.22:935,87,0	1/1:1,28:29:78.20:838,78,0	1/1:1,30:31:89.24:932,89,0	1/1:0,21:21:60.15:645,60,0	1/1:0,11:11:33.08:354,33,0
chr10	31226439	.	A	ACTCTCTCT	15107.39	PASS	AB=1.000;AC=50;AF=0.962;AN=52;BaseQRankSum=-2.084;DP=606;FS=0.000;HRun=0;HaplotypeScore=214.9939;InbreedingCoeff=0.2062;MQ=58.39;MQ0=5;MQRankSum=-1.673;QD=26.37;ReadPosRankSum=1.205;VQSLOD=4.2702;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:26:29.62:606,30,0	1/1:11,0:11:15.01:457,15,0	0/1:20,0:12:0:0,0,0	./.	1/1:29,0:29:32.22:786,32,0	1/1:12,0:11:18.06:410,18,0	1/1:34,0:34:30.57:902,31,0	1/1:39,0:38:43.80:659,44,0	1/1:17,5:24:15.05:465,15,0	1/1:27,0:27:45.20:1269,45,0	1/1:17,0:16:2.66:20,3,0	1/1:20,0:20:18.88:442,19,0	1/1:17,0:17:18.06:487,18,0	1/1:20,0:20:21.96:690,22,0	1/1:15,5:22:18.06:678,18,0	1/1:22,0:22:42.12:1185,42,0	0/1:23,0:23:6.42:405,0,6	1/1:28,0:28:51.07:1368,51,0	1/1:17,0:17:16.78:304,17,0	1/1:20,0:20:18.94:395,19,0	1/1:16,0:15:4.25:36,4,0	1/1:16,0:16:15.04:300,15,0	1/1:21,0:20:30.04:810,30,0	1/1:18,0:18:9.91:218,10,0	1/1:24,0:24:19.70:408,20,0	1/1:20,0:20:41.84:804,42,0	1/1:27,0:27:39.03:1001,39,0	./.
chr10	31226440	.	C	CTA	7450.33	PASS	AB=1.000;AC=46;AF=0.821;AN=56;BaseQRankSum=8.835;DP=614;FS=1.046;HRun=0;HaplotypeScore=198.4950;InbreedingCoeff=0.6337;MQ=58.04;MQ0=5;MQRankSum=-6.541;QD=14.27;ReadPosRankSum=2.673;VQSLOD=4.9276;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:23:41.79:373,42,0	1/1:11,0:11:17.90:171,18,0	0/0:20,0:12:26.16:0,26,266	0/0:31,0:16:33.69:0,34,338	1/1:30,0:30:59:468,59,0	1/1:12,0:11:28.89:231,29,0	1/1:33,1:34:47.67:397,48,0	1/1:41,0:40:90.13:894,90,0	0/0:24,0:24:0.41:0,0,231	0/1:27,0:27:21.49:21,0,209	0/0:17,0:16:8.74:0,9,72	1/1:21,0:21:21.39:198,21,0	1/1:17,1:18:50.06:432,50,0	1/1:20,1:21:3.65:197,4,0	0/1:23,0:22:7.78:8,0,182	1/1:22,0:22:53.15:444,53,0	1/1:23,0:23:35.72:382,36,0	1/1:29,0:29:40.29:483,40,0	1/1:19,0:19:25.42:325,25,0	1/1:21,0:21:44.37:305,44,0	1/1:16,0:15:9.74:68,10,0	1/1:14,0:14:31.86:301,32,0	1/1:21,0:20:55.78:493,56,0	1/1:19,0:19:9.44:80,9,0	1/1:23,1:24:32.20:253,32,0	1/1:18,1:19:51.71:474,52,0	1/1:27,1:28:41.77:367,42,0	1/1:4,0:4:11.37:85,11,0
chr10	31226441	.	T	TAA	11673.19	PASS	AB=0.662;AC=38;AF=0.679;AN=56;BaseQRankSum=-0.079;DP=637;FS=4.097;HRun=0;HaplotypeScore=180.8221;InbreedingCoeff=0.5225;MQ=55.64;MQ0=6;MQRankSum=-4.414;QD=23.68;ReadPosRankSum=6.909;VQSLOD=5.2376;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:15,10:23:18.28:573,0,18	1/1:1,10:11:17.95:284,18,0	0/0:21,0:12:33.37:0,33,436	0/0:30,0:15:38.19:0,38,524	1/1:8,20:29:31.60:657,32,0	1/1:13,5:17:6.63:351,7,0	1/1:9,25:34:46.28:661,46,0	1/1:12,31:42:8.23:1409,8,0	0/0:23,0:23:41.37:0,41,535	0/0:27,0:27:69.65:0,70,679	0/0:18,0:17:10.19:0,10,151	0/1:6,15:21:0.99:257,0,1	1/1:14,6:20:34.38:674,34,0	0/1:6,14:21:2.09:310,0,2	0/0:23,0:22:42.57:0,43,472	1/1:4,18:22:37.41:702,37,0	0/1:19,6:25:5.90:649,0,6	0/1:6,21:28:19.60:743,0,20	1/1:6,13:19:19.05:609,19,0	1/1:4,17:21:10.27:430,10,0	1/1:3,12:14:9.03:129,9,0	1/1:11,7:18:24.46:502,24,0	1/1:10,12:21:44.07:813,44,0	1/1:5,13:18:9.50:131,9,0	1/1:7,17:25:24.99:399,25,0	0/1:15,8:24:21.01:686,0,21	1/1:7,20:28:14.87:527,15,0	1/1:5,0:5:11.99:177,12,0
chr10	31226462	.	C	CTCTCTT	14306.13	PASS	AB=0.875;AC=46;AF=0.821;AN=56;BaseQRankSum=3.492;DP=637;FS=11.128;HRun=0;HaplotypeScore=180.6909;InbreedingCoeff=0.2569;MQ=48.22;MQ0=17;MQRankSum=2.121;QD=25.23;ReadPosRankSum=6.157;VQSLOD=3.0033;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,6:24:45.69:807,46,0	1/1:5,5:10:21.03:496,21,0	0/1:31,0:12:29.06:29,0,117	0/0:51,0:13:20.95:0,21,181	1/1:25,5:31:45.36:980,45,0	1/1:5,3:18:23.77:435,24,0	1/1:21,6:28:13.60:651,14,0	1/1:36,0:34:62.57:608,63,0	0/1:16,0:16:12.87:187,0,13	0/1:28,0:28:35.06:35,0,420	0/0:19,0:18:16.65:0,17,130	1/1:13,4:17:25.87:515,26,0	1/1:9,3:20:15.97:514,16,0	1/1:11,7:18:33.61:700,34,0	0/1:16,0:15:22.86:357,0,23	1/1:10,10:21:36.09:1075,36,0	0/1:8,2:20:14.93:424,0,15	1/1:17,10:28:65.33:1294,65,0	1/1:16,0:18:28.99:449,29,0	1/1:17,3:20:23.49:543,23,0	1/1:9,1:9:7.91:88,8,0	0/1:8,1:20:9.73:265,0,10	1/1:9,8:21:15.38:770,15,0	1/1:20,1:19:37.55:399,38,0	1/1:24,2:28:18.14:610,18,0	1/1:9,6:29:45.32:943,45,0	1/1:18,6:26:59.69:1014,60,0	1/1:6,0:6:14.81:121,15,0
chr10	31226683	.	T	TC	6545.30	PASS	AB=0.707;AC=43;AF=0.768;AN=56;BaseQRankSum=6.657;DP=490;FS=11.897;HRun=0;HaplotypeScore=108.1304;InbreedingCoeff=0.6127;MQ=53.55;MQ0=12;MQRankSum=2.398;QD=15.58;ReadPosRankSum=3.481;VQSLOD=6.5754;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,15:33:48.64:554,49,0	1/1:6,7:13:8.50:259,9,0	1/1:4,0:2:1.24:3,1,0	0/0:2,0:2:3.01:0,3,42	1/1:5,20:25:35.39:345,35,0	1/1:6,8:13:32.64:299,33,0	1/1:11,9:20:4.94:298,5,0	1/1:8,13:20:10.92:275,11,0	0/0:16,0:16:23.59:0,24,275	0/0:17,0:16:26.43:0,26,234	0/0:15,0:15:21.26:0,21,153	1/1:5,13:18:28.45:254,28,0	0/1:15,3:17:1.57:128,0,2	1/1:13,5:18:29.81:269,30,0	0/0:19,0:19:53.41:0,53,385	0/1:6,7:12:1.42:109,0,1	1/1:8,14:21:36.45:497,36,0	1/1:12,13:25:59.79:565,60,0	0/1:7,12:18:36.66:237,0,37	1/1:2,16:18:31.76:282,32,0	1/1:9,15:22:12.35:270,12,0	1/1:8,3:11:10.99:164,11,0	1/1:3,13:16:25.46:240,25,0	1/1:3,12:15:0.49:202,0,0	1/1:12,6:16:33.63:317,34,0	1/1:8,23:29:21.02:561,21,0	1/1:8,10:18:13.89:324,14,0	1/1:2,3:4:11.45:90,11,0
chr10	31226684	.	T	TCC	10851.34	PASS	AB=0.972;AC=42;AF=0.750;AN=56;BaseQRankSum=4.660;DP=477;FS=2.606;HRun=1;HaplotypeScore=100.3630;InbreedingCoeff=0.7691;MQ=52.76;MQ0=12;MQRankSum=1.539;QD=26.53;ReadPosRankSum=-1.080;VQSLOD=3.5954;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:33,0:32:50.84:886,51,0	1/1:12,1:13:33.10:431,33,0	0/0:4,0:2:2.98:0,3,22	0/0:3,0:2:3.01:0,3,41	1/1:20,1:21:51.07:588,51,0	1/1:13,1:13:33.10:425,33,0	1/1:18,2:22:46.08:598,46,0	1/1:21,3:23:57.63:740,58,0	0/0:13,0:13:27.08:0,27,369	0/0:14,0:13:39.11:0,39,488	0/0:14,0:14:24.03:0,24,292	1/1:13,2:15:32.45:388,32,0	1/1:6,12:17:14.54:184,15,0	1/1:5,11:17:27.09:365,27,0	0/0:20,0:20:51.04:0,51,512	1/1:11,2:12:19.84:240,20,0	1/1:23,1:23:60.16:753,60,0	1/1:24,1:25:72.16:941,72,0	0/1:16,1:16:0.77:440,0,1	1/1:18,0:18:38.95:466,39,0	1/1:22,2:20:39.10:477,39,0	1/1:10,2:12:31.57:344,32,0	1/1:14,2:16:29.78:335,30,0	0/1:15,0:15:13.48:251,0,13	1/1:14,3:15:40.73:505,41,0	1/1:29,1:28:29.69:877,30,0	1/1:15,1:16:41.85:496,42,0	1/1:5,0:4:11.07:121,11,0
chr10	31227033	.	TGATGA	T	2388.61	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.043;DP=560;FS=7.289;HRun=0;HaplotypeScore=113.1766;InbreedingCoeff=0.9882;MQ=83.58;MQ0=0;MQRankSum=-6.871;QD=50.82;ReadPosRankSum=1.250;VQSLOD=3.8399;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,135,4246	0/0:11,0:11:30.10:0,30,951	0/0:20,0:20:48.12:0,48,1263	0/0:15,0:15:40.19:0,40,1116	0/0:26,0:26:72.25:0,72,2187	0/0:21,0:21:60.21:0,60,1904	0/0:14,0:14:42.12:0,42,1249	0/0:37,0:37:99:0,111,3355	0/0:11,0:11:33.11:0,33,1047	1/1:0,22:22:63.22:1367,63,0	1/1:4,21:25:54.17:1143,54,0	0/0:7,0:7:21.07:0,21,621	0/0:16,0:16:48.15:0,48,1443	0/0:21,0:21:63.22:0,63,1969	0/0:20,0:20:57.20:0,57,1799	0/0:25,0:25:75.24:0,75,2269	0/0:28,0:28:84.29:0,84,2579	0/0:10,0:10:30.10:0,30,916	0/0:23,0:23:66.23:0,66,2034	0/0:32,0:32:90.31:0,90,2807	0/0:11,0:11:30.10:0,30,952	0/0:17,0:17:51.18:0,51,1596	0/0:11,0:11:30.09:0,30,813	0/0:17,0:17:48.16:0,48,1522	0/0:15,0:15:45.15:0,45,1428	0/0:30,1:31:28.15:0,28,2658	0/0:21,0:21:63.19:0,63,1833	0/0:5,0:5:15.05:0,15,466
chr10	31227213	.	A	ACC	4572.43	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=0.336;DP=448;FS=9.178;HRun=9;HaplotypeScore=71.2611;InbreedingCoeff=0.8099;MQ=80.93;MQ0=0;MQRankSum=-3.410;QD=13.45;ReadPosRankSum=-3.206;VQSLOD=1.5083;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:24,2:26:34.30:353,34,0	1/1:8,0:8:12.03:157,12,0	0/0:13,0:14:17.66:0,18,162	0/0:14,0:14:2.01:0,2,111	1/1:3,11:14:20.47:219,20,0	1/1:3,11:15:6.01:73,6,0	1/1:7,18:28:44.97:582,45,0	1/1:10,8:18:12.02:158,12,0	0/0:21,0:21:52.92:0,53,540	0/0:24,0:24:63.11:0,63,665	0/0:12,0:12:27.04:0,27,279	1/1:4,12:17:8.52:101,9,0	1/1:3,11:15:17.55:227,18,0	1/1:3,10:15:18.02:241,18,0	0/0:21,0:23:62.60:0,63,623	1/1:0,9:9:12.04:185,12,0	1/1:4,9:16:23.52:276,24,0	1/1:2,11:14:13.51:118,14,0	1/1:8,1:12:14:133,14,0	1/1:6,1:7:9.03:135,9,0	1/1:6,14:20:14.51:170,15,0	1/1:11,3:16:27.05:336,27,0	1/1:3,9:13:9.02:118,9,0	1/1:7,20:31:40.60:534,41,0	1/1:4,7:11:6.02:92,6,0	1/1:11,10:22:18:200,18,0	1/1:10,1:11:11.51:120,12,0	1/1:2,0:2:3.01:44,3,0
chr10	31229631	.	A	ATTT	16346.46	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-5.436;DP=632;FS=9.095;HRun=10;HaplotypeScore=95.9184;InbreedingCoeff=0.9639;MQ=67.86;MQ0=0;MQRankSum=-1.612;QD=31.26;ReadPosRankSum=-2.343;VQSLOD=3.0841;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:14,41:60:87.27:1487,87,0	1/1:4,9:14:24.06:409,24,0	0/0:11,0:11:12.47:0,12,144	0/0:9,0:10:11.85:0,12,120	1/1:12,18:32:63.14:1031,63,0	1/1:4,19:25:60.14:1046,60,0	1/1:4,10:15:30.08:542,30,0	1/1:11,22:38:82.46:1379,82,0	0/0:19,0:19:42.08:0,42,496	0/0:23,0:24:55.48:0,55,686	0/0:20,0:21:54.06:0,54,638	1/1:6,18:25:39.13:735,39,0	1/1:5,10:16:27.07:484,27,0	1/1:2,14:17:31.83:563,32,0	0/0:23,0:24:49.40:0,49,605	1/1:5,9:18:21.03:335,21,0	1/1:1,15:17:45.15:850,45,0	1/1:4,16:20:30.10:577,30,0	1/1:12,12:26:51.15:885,51,0	1/1:3,19:25:69.02:952,69,0	1/1:1,15:18:42.49:675,42,0	1/1:7,13:22:33.03:502,33,0	1/1:8,16:27:43.14:643,43,0	1/1:9,21:34:64.09:1108,64,0	1/1:2,16:19:39.13:690,39,0	1/1:8,15:24:20.68:907,21,0	1/1:6,13:22:27.07:465,27,0	1/1:6,0:6:6:82,6,0
chr10	31229786	.	T	TC	14269.70	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-3.815;DP=603;FS=2.921;HRun=6;HaplotypeScore=70.2720;InbreedingCoeff=0.9961;MQ=95.10;MQ0=0;MQRankSum=-5.836;QD=29.73;ReadPosRankSum=3.670;VQSLOD=5.6229;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,37:42:93.30:1169,93,0	1/1:4,13:17:30.10:377,30,0	0/0:23,0:24:49.52:0,50,576	0/0:35,0:35:66.06:0,66,638	1/1:3,20:23:57.18:717,57,0	1/1:3,22:25:57.18:717,57,0	1/1:3,21:24:48.15:597,48,0	1/1:10,14:24:45.14:563,45,0	0/0:17,0:17:45.10:0,45,458	0/0:16,0:16:48.11:0,48,489	0/0:10,0:10:30.07:0,30,306	1/1:0,21:21:57.18:717,57,0	1/1:0,13:13:30.10:377,30,0	1/1:2,13:15:39.12:490,39,0	0/0:21,0:21:63.14:0,63,643	1/1:1,12:13:30.10:377,30,0	1/1:6,20:26:26.57:649,27,0	1/1:0,30:30:87.28:1094,87,0	1/1:2,14:16:39.11:474,39,0	1/1:1,17:18:45.10:548,45,0	1/1:4,31:35:84.27:1057,84,0	1/1:2,16:18:39.12:491,39,0	1/1:2,13:15:39.12:490,39,0	1/1:3,23:26:63.20:793,63,0	1/1:1,19:20:48.15:604,48,0	1/1:1,25:26:72.18:873,72,0	1/1:0,28:28:72.23:906,72,0	1/1:0,5:5:15.05:189,15,0
chr10	31230037	.	CT	C	5173.63	PASS	AB=0.681;AC=42;AF=0.750;AN=56;BaseQRankSum=3.852;DP=527;FS=11.091;HRun=14;HaplotypeScore=65.7667;InbreedingCoeff=0.5133;MQ=73.30;MQ0=1;MQRankSum=-0.114;QD=11.81;ReadPosRankSum=3.492;VQSLOD=4.0076;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,18:25:32.66:226,33,0	1/1:2,7:9:5.91:41,6,0	0/1:15,1:10:8.80:9,0,43	0/0:17,1:14:7.14:0,7,73	1/1:4,27:36:84.34:531,84,0	1/1:5,16:23:51.63:340,52,0	0/1:4,6:11:32.81:86,0,33	1/1:14,29:45:32.35:493,32,0	0/0:16,0:17:38.60:0,39,309	0/0:24,0:24:49.53:0,50,426	0/0:13,3:16:0.70:0,1,263	1/1:1,9:10:23.80:164,24,0	1/1:5,11:17:33.56:217,34,0	0/1:3,8:11:10.27:85,0,10	0/0:13,0:13:25.19:0,25,206	1/1:1,6:7:17.84:123,18,0	1/1:3,10:13:1.24:121,1,0	1/1:3,17:20:38.68:267,39,0	0/1:7,15:22:8.13:238,0,8	1/1:4,22:27:64.25:425,64,0	1/1:2,10:12:23.79:164,24,0	1/1:7,18:25:44.35:300,44,0	1/1:2,18:20:7.33:194,7,0	1/1:4,11:15:30.20:207,30,0	1/1:6,11:18:31.72:211,32,0	1/1:4,16:20:41.57:285,42,0	1/1:8,21:29:28.46:342,28,0	1/1:2,5:7:14.84:103,15,0
chr10	31231113	.	GA	G	8895.07	PASS	AB=0.936;AC=41;AF=0.732;AN=56;BaseQRankSum=-2.005;DP=598;FS=3.249;HRun=3;HaplotypeScore=77.2939;InbreedingCoeff=0.7010;MQ=86.90;MQ0=0;MQRankSum=-2.833;QD=20.35;ReadPosRankSum=3.609;VQSLOD=4.6871;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,20:23:39.10:466,39,0	1/1:2,13:15:27.06:318,27,0	0/0:23,0:23:34.33:0,34,586	0/0:29,0:26:56.27:0,56,599	1/1:4,16:21:31.22:351,31,0	1/1:1,18:19:30.05:342,30,0	1/1:2,17:19:34.30:458,34,0	1/1:3,15:18:39.60:441,40,0	0/0:21,0:21:60.15:0,60,819	0/0:32,0:32:9.34:0,9,274	0/0:24,0:24:17.91:0,18,178	1/1:1,16:17:33.09:401,33,0	1/1:0,25:25:57.13:685,57,0	1/1:3,19:22:45.09:532,45,0	0/0:32,0:32:96.26:0,96,1262	1/1:1,17:18:39.10:467,39,0	1/1:0,28:28:60.19:740,60,0	1/1:0,27:27:66.21:814,66,0	0/1:18,1:19:35.93:36,0,54	1/1:20,0:20:9.47:197,9,0	0/1:22,2:23:32.45:110,0,32	1/1:0,11:11:27.06:318,27,0	1/1:2,16:18:41.82:485,42,0	1/1:2,21:23:54.17:666,54,0	1/1:0,16:16:24.08:296,24,0	1/1:0,18:18:45.08:502,45,0	0/1:27,2:29:50.18:121,0,50	1/1:0,7:7:12.04:148,12,0
chr10	31231115	.	AAG	A	1168.27	PASS	AB=0.984;AC=27;AF=0.482;AN=56;BaseQRankSum=9.745;DP=615;FS=18.722;HRun=0;HaplotypeScore=114.7231;InbreedingCoeff=0.0629;MQ=86.31;MQ0=0;MQRankSum=-1.104;QD=2.89;ReadPosRankSum=4.898;VQSLOD=0.5817;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:23,1:24:20.54:66,0,21	0/1:13,1:14:19.97:58,0,20	0/0:22,0:22:50.17:0,50,791	0/0:28,0:25:68.82:0,69,912	0/1:20,0:20:23.28:60,0,23	1/1:19,1:20:17.64:89,18,0	0/1:20,0:20:34.60:63,0,35	0/1:18,1:19:45.37:142,0,45	0/0:22,0:22:63.15:0,63,1154	0/0:33,0:34:33.89:0,34,570	0/0:25,0:25:37.31:0,37,415	0/1:17,0:17:14.23:20,0,14	1/1:28,0:28:0.86:55,1,0	1/1:21,0:21:22.72:93,23,0	0/0:33,0:33:99:0,99,1731	0/1:19,1:20:8.85:70,0,9	1/1:29,0:29:9.40:52,9,0	1/1:27,0:27:34.21:85,34,0	0/0:18,0:19:9.15:0,9,229	0/1:23,0:23:99:169,0,148	0/1:26,0:25:25.12:25,0,270	0/1:11,0:11:10.83:60,0,11	0/1:20,0:20:31.52:72,0,32	0/1:23,0:23:23.58:37,0,24	1/1:16,0:16:12.13:31,12,0	1/1:18,0:18:17.73:104,18,0	0/0:28,0:28:10.78:0,11,286	0/1:8,0:8:0.06:0,0,68
chr10	31231116	.	AG	A	3032.99	PASS	AB=1.000;AC=32;AF=0.571;AN=56;BaseQRankSum=7.105;DP=620;FS=12.338;HRun=10;HaplotypeScore=102.3731;InbreedingCoeff=0.4522;MQ=85.45;MQ0=0;MQRankSum=-1.515;QD=7.10;ReadPosRankSum=7.166;VQSLOD=0.2783;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:24:6.42:116,0,6	0/1:14,0:14:11.02:74,0,11	0/0:22,0:22:39.91:0,40,394	0/0:27,1:25:11.48:0,11,341	0/1:21,0:21:21.93:65,0,22	1/1:20,0:20:26.84:116,27,0	0/1:20,0:20:33.32:100,0,33	0/1:20,0:20:50.79:54,0,51	0/0:24,0:24:57.13:0,57,615	1/1:11,23:34:63.89:579,64,0	1/1:8,17:25:53.86:453,54,0	1/1:17,0:17:16.02:123,16,0	1/1:28,0:28:28.45:192,28,0	1/1:23,0:23:19.40:171,19,0	0/0:32,0:32:81.17:0,81,863	1/1:22,0:22:12.88:117,13,0	1/1:31,0:31:14.03:208,14,0	1/1:27,0:27:59.25:253,59,0	0/0:17,0:17:35.24:0,35,411	0/0:18,0:18:26.92:0,27,243	0/0:26,0:25:31.17:0,31,441	1/1:11,0:11:16.73:104,17,0	0/1:23,0:23:0.65:118,0,1	0/1:24,0:24:13.50:154,0,14	1/1:17,0:17:21.47:92,21,0	1/1:18,0:18:29.20:119,29,0	0/0:26,0:26:25.85:0,26,513	0/1:8,0:8:28.13:28,0,54
chr10	31232043	.	A	ATTT	6873.42	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=8.624;DP=629;FS=0.913;HRun=12;HaplotypeScore=105.2927;InbreedingCoeff=0.9811;MQ=73.87;MQ0=0;MQRankSum=0.566;QD=13.69;ReadPosRankSum=-0.684;VQSLOD=3.1197;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,1:26:33.76:253,34,0	1/1:2,0:14:26.92:220,27,0	0/0:15,0:13:10.78:0,11,96	0/0:15,0:13:14.95:0,15,152	1/1:5,1:25:56.94:480,57,0	1/1:7,1:25:35.88:306,36,0	1/1:6,0:22:24.66:169,25,0	1/1:8,0:32:75.49:593,75,0	0/0:18,0:18:41.98:0,42,451	0/0:27,0:28:71.66:0,72,748	0/0:21,0:21:55.39:0,55,619	1/1:2,0:20:33.81:242,34,0	1/1:5,0:23:37.12:283,37,0	1/1:2,1:22:35.41:304,35,0	0/0:28,0:30:74.91:0,75,809	1/1:4,1:26:21.07:390,21,0	1/1:4,0:34:68.19:489,68,0	1/1:5,0:33:60.97:454,61,0	1/1:9,1:23:30.70:283,31,0	1/1:2,0:24:61.01:492,61,0	1/1:5,0:19:17.43:120,17,0	1/1:2,0:17:39.62:297,40,0	1/1:2,0:21:31.72:233,32,0	1/1:3,0:17:23.92:187,24,0	1/1:11,0:31:44.61:324,45,0	1/1:3,0:19:40.97:308,41,0	1/1:2,0:23:40.10:300,40,0	1/1:0,1:6:14.96:146,15,0
chr10	31233519	.	T	TGCTGTCTAGCTA	64273.99	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-4.263;DP=678;FS=9.501;HRun=0;HaplotypeScore=215.5098;InbreedingCoeff=0.9870;MQ=72.65;MQ0=0;MQRankSum=-16.827;QD=121.04;ReadPosRankSum=0.203;VQSLOD=3.8988;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:17,13:34:63.22:3770,63,0	1/1:7,1:8:12.04:664,12,0	0/0:18,0:18:47.32:0,47,1521	0/0:23,0:23:60.17:0,60,1821	1/1:18,10:29:48.16:2836,48,0	1/1:9,12:22:48.16:2817,48,0	1/1:21,13:36:75.26:4306,75,0	1/1:20,2:27:75.22:3511,75,0	0/0:22,0:22:60.21:0,60,2192	0/0:22,0:22:66.23:0,66,2390	0/0:28,0:28:81.28:0,81,2948	1/1:16,18:36:87.30:5025,87,0	1/1:9,10:21:41.93:2246,42,0	1/1:12,10:24:54.19:3308,54,0	0/0:34,0:34:99:0,99,3274	1/1:10,13:27:54.19:3029,54,0	1/1:12,10:26:48.16:2830,48,0	1/1:5,3:10:15.05:776,15,0	1/1:11,6:18:42.10:2004,42,0	1/1:10,15:28:60.21:3617,60,0	1/1:11,1:12:27.09:1520,27,0	1/1:14,8:25:36.12:2166,36,0	1/1:16,17:35:66.09:3985,66,0	1/1:7,6:18:27.09:1633,27,0	1/1:9,20:31:75.26:4577,75,0	1/1:17,10:27:78.27:4157,78,0	1/1:17,11:28:81.28:4575,81,0	1/1:4,2:7:15.05:921,15,0
chr10	31233698	.	G	GC	16211.03	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-10.202;DP=652;FS=0.352;HRun=6;HaplotypeScore=60.6680;InbreedingCoeff=0.9746;MQ=87.19;MQ0=0;MQRankSum=-5.182;QD=32.42;ReadPosRankSum=1.412;VQSLOD=5.1034;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,36:43:99:1360,103,0	1/1:1,8:9:21.07:264,21,0	0/0:24,0:24:60.10:0,60,594	0/0:24,0:24:51.05:0,51,501	1/1:3,13:16:5.50:375,5,0	1/1:0,14:14:42.09:510,42,0	1/1:4,26:30:75.20:926,75,0	1/1:3,32:35:96.31:1206,96,0	0/0:32,0:32:87.18:0,87,881	0/0:20,0:20:57.13:0,57,581	0/0:20,0:20:57.13:0,57,581	1/1:2,24:26:69.22:867,69,0	1/1:1,18:19:48.15:604,48,0	1/1:2,19:21:57.18:716,57,0	0/0:32,0:32:93.21:0,93,948	1/1:1,24:25:60.19:751,60,0	1/1:1,25:26:72.23:906,72,0	1/1:1,19:20:51.16:642,51,0	1/1:2,22:24:63.17:776,63,0	1/1:3,19:22:60.19:752,60,0	1/1:3,38:41:96.31:1208,96,0	1/1:3,12:15:36.12:452,36,0	1/1:1,17:18:51.16:639,51,0	1/1:1,20:21:57.18:717,57,0	1/1:4,18:23:60.19:746,60,0	1/1:2,20:22:60.18:741,60,0	1/1:0,24:24:66.21:830,66,0	1/1:1,5:6:18.06:225,18,0
chr10	31234759	.	C	CA	21469.51	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-9.021;DP=713;FS=2.449;HRun=2;HaplotypeScore=71.6340;InbreedingCoeff=0.9787;MQ=88.81;MQ0=0;MQRankSum=-7.046;QD=38.13;ReadPosRankSum=4.851;VQSLOD=5.3721;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:4,50:54:99:2025,141,0	1/1:1,11:12:30.06:429,30,0	0/0:30,0:30:75.23:0,75,921	0/0:23,0:23:69.18:0,69,831	1/1:0,25:25:69.19:970,69,0	1/1:0,22:22:63.21:907,63,0	1/1:2,19:21:45.15:648,45,0	1/1:0,35:34:99:1470,105,0	0/0:21,0:21:60.19:0,60,743	0/0:28,0:28:78.24:0,78,967	0/0:13,0:13:39.12:0,39,483	1/1:0,31:31:78.26:1123,78,0	1/1:1,19:20:54.18:778,54,0	1/1:2,27:29:77.94:1123,78,0	0/0:35,0:35:99:0,102,1263	1/1:2,22:24:26.17:827,26,0	1/1:1,32:33:93.31:1339,93,0	1/1:1,19:20:51.17:734,51,0	1/1:4,22:26:69.18:933,69,0	1/1:1,23:24:60.12:818,60,0	1/1:0,47:47:99:1815,126,0	1/1:2,23:25:60.20:864,60,0	1/1:0,18:18:54.18:778,54,0	1/1:0,29:29:81.27:1167,81,0	1/1:1,18:19:51.17:734,51,0	1/1:0,22:22:66.22:951,66,0	1/1:1,22:22:66.22:950,66,0	1/1:2,2:4:6.02:86,6,0
chr10	31236781	.	CG	C	15440.16	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=8.684;DP=705;FS=0.709;HRun=6;HaplotypeScore=85.6424;InbreedingCoeff=0.9937;MQ=91.38;MQ0=0;MQRankSum=-5.080;QD=28.59;ReadPosRankSum=4.209;VQSLOD=5.2592;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,28:32:81.20:870,81,0	1/1:1,11:12:30.08:322,30,0	0/0:27,0:28:62.15:0,62,898	0/0:37,0:36:69.34:0,69,944	1/1:1,25:26:78.20:837,78,0	1/1:0,23:23:63.16:677,63,0	1/1:1,35:36:99:1064,99,0	1/1:5,23:28:69.16:733,69,0	0/0:30,0:30:81.26:0,81,1063	0/0:28,0:28:75.19:0,75,952	0/0:17,0:17:48.14:0,48,615	1/1:2,25:27:69.17:740,69,0	1/1:1,19:20:54.13:580,54,0	1/1:1,14:15:42.11:451,42,0	0/0:25,0:25:72.22:0,72,932	1/1:0,19:19:51.13:548,51,0	1/1:1,26:27:72.18:774,72,0	1/1:2,33:35:96.24:1032,96,0	1/1:5,19:24:57.13:607,57,0	1/1:1,20:21:57.14:612,57,0	1/1:2,46:48:99:1386,129,0	1/1:1,16:17:45.11:483,45,0	1/1:0,20:20:60.15:645,60,0	1/1:2,21:23:60.15:645,60,0	1/1:1,23:24:57.14:612,57,0	1/1:3,32:35:59.76:984,60,0	1/1:1,23:24:66.16:709,66,0	1/1:0,4:4:12.03:129,12,0
chr10	31238007	.	GC	G	1180.92	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.727;DP=794;FS=1.981;HRun=5;HaplotypeScore=78.8838;InbreedingCoeff=0.9852;MQ=70.81;MQ0=0;MQRankSum=-0.709;QD=26.84;ReadPosRankSum=-3.036;VQSLOD=2.1976;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,147,1986	0/0:8,0:8:21.07:0,21,287	0/0:27,0:25:66.46:0,66,792	0/0:28,0:26:34.92:0,35,780	0/0:21,0:21:60.16:0,60,777	0/0:22,0:22:60.20:0,60,815	0/0:47,0:47:99:0,126,1691	0/0:31,0:31:78.26:0,78,1057	0/0:22,0:22:63.20:0,63,846	1/1:1,33:34:99:1097,99,0	1/1:0,10:10:17.74:204,18,0	0/0:41,0:41:99:0,120,1619	0/0:42,0:42:99:0,114,1500	0/0:32,0:32:96.31:0,96,1295	0/0:29,0:29:84.26:0,84,1128	0/0:35,0:35:99:0,102,1386	0/0:35,0:35:99:0,105,1428	0/0:23,0:23:66.20:0,66,884	0/0:29,0:29:69.21:0,69,913	0/0:21,0:21:60.17:0,60,786	0/0:74,0:74:99:0,214,2832	0/0:32,0:32:93.29:0,93,1251	0/0:12,0:12:33.11:0,33,450	0/0:24,0:24:69.23:0,69,942	0/0:19,0:19:54.18:0,54,734	0/0:18,0:18:48.16:0,48,657	0/0:24,0:24:69.22:0,69,918	0/0:5,0:5:15.05:0,15,204
chr10	31239200	.	ATCT	A	1685.48	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-2.560;DP=834;FS=2.079;HRun=0;HaplotypeScore=165.7650;InbreedingCoeff=0.9999;MQ=84.09;MQ0=0;MQRankSum=-1.989;QD=36.64;ReadPosRankSum=0.862;VQSLOD=4.5490;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,141,2832	0/0:13,0:13:39.13:0,39,857	0/0:32,0:32:80.08:0,80,1506	0/0:38,0:38:91.76:0,92,1776	0/0:26,0:26:75.23:0,75,1623	0/0:18,0:18:54.16:0,54,1159	0/0:17,0:17:51.15:0,51,1089	0/0:40,0:40:99:0,117,2504	0/0:29,0:29:87.28:0,87,1943	1/1:2,22:24:66.20:1092,66,0	1/1:2,20:22:42.14:715,42,0	0/0:28,0:28:81.28:0,81,1859	0/0:28,0:28:84.28:0,84,1890	0/0:35,0:35:99:0,105,2307	0/0:31,0:31:87.29:0,87,1938	0/0:39,0:39:99:0,117,2567	0/0:43,0:43:99:0,129,2773	0/0:19,0:19:57.20:0,57,1314	0/0:24,0:24:66.13:0,66,1347	0/0:28,0:28:78.23:0,78,1654	0/0:43,0:43:99:0,126,2662	0/0:31,0:31:90.27:0,90,1945	0/0:36,0:36:99:0,105,2290	0/0:33,0:33:99:0,99,2184	0/0:23,0:23:66.22:0,66,1467	0/0:37,1:38:63.21:0,63,2425	0/0:32,0:32:93.30:0,93,2001	0/0:16,0:16:45.15:0,45,1015
chr10	31244473	.	G	GCA	635.57	PASS	AB=0.963;AC=31;AF=0.554;AN=56;BaseQRankSum=4.506;DP=362;FS=3.847;HRun=0;HaplotypeScore=77.7619;InbreedingCoeff=-0.0249;MQ=54.29;MQ0=13;MQRankSum=0.778;QD=2.05;ReadPosRankSum=-3.139;VQSLOD=0.9006;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:28:19.44:96,0,19	1/1:3,0:3:5.89:85,6,0	0/0:4,0:1:3.01:0,3,31	0/0:10,0:5:2.80:0,3,13	0/1:12,0:12:1.63:61,0,2	1/1:14,0:14:6.23:49,6,0	0/1:19,0:18:4:91,0,4	0/1:12,0:11:15.42:15,0,35	0/0:12,0:12:29.99:0,30,330	0/0:11,0:10:24.55:0,25,351	0/0:7,0:7:15.05:0,15,210	1/1:17,0:17:1.69:6,2,0	0/1:17,0:17:8.57:9,0,31	0/1:17,0:17:9.64:41,0,10	0/1:8,0:8:4.81:5,0,183	0/0:8,0:8:3.95:0,4,38	0/1:22,0:21:7.81:18,0,8	0/1:21,0:20:5:5,0,85	1/1:8,0:6:1.57:25,2,0	0/1:3,4:7:14.28:37,0,14	0/1:30,0:28:50.74:51,0,54	1/1:9,0:9:2.47:24,2,0	0/1:12,0:12:2.90:3,0,15	1/1:19,0:17:2.62:23,3,0	0/1:13,0:15:6.98:7,0,8	1/1:7,0:7:1.99:26,2,0	1/1:6,0:6:5.55:44,6,0	1/1:5,0:4:8.97:70,9,0
chr10	31244475	.	G	GCACA	1938.49	PASS	AB=1.000;AC=41;AF=0.854;AN=48;BaseQRankSum=1.377;DP=415;FS=2.900;HRun=0;HaplotypeScore=107.0069;InbreedingCoeff=0.1252;MQ=49.84;MQ0=14;MQRankSum=-1.518;QD=5.14;ReadPosRankSum=-0.282;VQSLOD=2.1260;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:29:17.98:248,18,0	1/1:3,0:3:6:84,6,0	./.	./.	1/1:15,0:15:8.96:105,9,0	1/1:18,0:18:10.85:139,11,0	1/1:22,0:21:15.03:237,15,0	1/1:18,0:17:3.63:10,4,0	0/0:12,0:12:17.84:0,18,229	1/1:12,0:11:0.89:2,1,0	./.	1/1:21,0:20:9.02:99,9,0	1/1:17,0:17:6:66,6,0	1/1:22,0:21:5.79:89,6,0	0/1:8,0:8:36.70:111,0,37	0/1:10,0:10:0:0,0,0	1/1:26,0:25:15.01:204,15,0	1/1:24,0:23:13.36:170,13,0	./.	0/1:8,0:8:12.75:23,0,13	0/1:29,0:28:57.07:67,0,57	1/1:12,0:11:3.01:49,3,0	1/1:15,1:21:1.97:6,2,0	1/1:16,5:19:3.01:70,3,0	1/1:16,0:17:2.04:6,2,0	0/1:11,0:11:14.82:68,0,15	1/1:5,0:5:3.01:50,3,0	1/1:7,0:6:12.49:158,12,0
chr10	31246805	.	A	ATTTATTTG	24576.23	PASS	AB=0.905;AC=45;AF=0.804;AN=56;BaseQRankSum=1.597;DP=424;FS=18.789;HRun=0;HaplotypeScore=149.4249;InbreedingCoeff=0.5908;MQ=42.95;MQ0=3;MQRankSum=-7.705;QD=64.50;ReadPosRankSum=-0.224;VQSLOD=3.1717;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,7:19:32.89:898,33,0	1/1:7,4:11:29.97:847,30,0	0/0:8,0:4:8.71:0,9,130	0/0:10,0:6:14.66:0,15,209	1/1:17,7:23:42.08:1130,42,0	1/1:7,7:14:41.87:1198,42,0	1/1:8,1:9:8.88:158,9,0	1/1:16,21:42:99:2584,109,0	0/0:13,0:13:36.08:0,36,800	0/1:11,0:11:56.36:56,0,108	0/1:14,0:15:13.10:87,0,13	1/1:9,7:16:38.87:1061,39,0	1/1:6,6:13:35.83:1120,36,0	1/1:11,6:17:44.74:1224,45,0	0/0:11,0:11:24.08:0,24,622	0/1:5,2:7:48.75:330,0,49	1/1:14,7:21:53.93:1655,54,0	1/1:21,6:27:56.72:1313,57,0	1/1:16,5:20:53.86:1713,54,0	1/1:12,10:22:59.74:1812,60,0	1/1:4,0:3:3.01:49,3,0	1/1:3,4:7:20.92:604,21,0	1/1:1,7:9:11.95:385,12,0	1/1:5,2:7:10.28:217,10,0	1/1:7,11:18:45:1668,45,0	1/1:7,17:24:69.04:2392,69,0	1/1:8,6:14:39.07:1411,39,0	1/1:6,3:9:24.08:665,24,0
chr10	31246809	.	A	ATTTG	10195.20	PASS	AB=0.962;AC=29;AF=0.518;AN=56;BaseQRankSum=1.335;DP=438;FS=21.283;HRun=0;HaplotypeScore=182.5050;InbreedingCoeff=-0.4135;MQ=40.74;MQ0=4;MQRankSum=-6.804;QD=25.88;ReadPosRankSum=1.638;VQSLOD=3.3882;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:20,0:20:78.72:362,0,79	0/1:10,0:10:6.89:384,0,7	0/0:8,0:4:3.72:0,4,89	0/0:10,0:5:5.54:0,6,135	1/1:24,1:24:16.13:596,16,0	0/1:12,2:14:31.85:470,0,32	0/1:8,1:9:7.65:71,0,8	0/1:39,0:39:99:692,0,206	0/0:13,0:13:36.08:0,36,583	0/1:11,0:11:99:196,0,107	0/1:15,0:15:34.28:309,0,34	0/1:19,0:19:64.87:420,0,65	0/1:14,1:15:37.24:422,0,37	0/1:15,2:17:81.70:434,0,82	0/0:13,0:13:30.08:0,30,495	0/1:9,0:8:61.95:159,0,62	0/1:20,1:21:38.81:656,0,39	0/1:24,0:24:86.42:579,0,86	0/1:22,2:22:28.78:788,0,29	0/1:20,3:23:41.19:687,0,41	1/1:5,0:4:3.01:49,3,0	0/1:7,0:7:13.73:249,0,14	0/1:9,0:9:4.85:146,0,5	0/1:11,0:11:90.91:112,0,91	1/1:16,1:17:9.16:661,9,0	1/1:23,0:23:2.38:837,2,0	0/1:16,2:18:43.84:602,0,44	1/1:7,1:9:24.01:314,24,0
chr10	31246815	.	TTG	T	553.02	PASS	AB=0.921;AC=12;AF=0.231;AN=52;BaseQRankSum=-4.489;DP=405;FS=7.042;HRun=0;HaplotypeScore=195.0944;InbreedingCoeff=0.4800;MQ=40.78;MQ0=8;MQRankSum=1.718;QD=4.35;ReadPosRankSum=2.216;VQSLOD=1.9703;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:10.50:0,11,34	0/0:8,0:8:7.93:0,8,33	./.	./.	0/1:19,0:18:0:0,0,0	0/0:13,0:13:10.62:0,11,47	1/1:9,0:9:2.50:9,2,0	1/1:27,0:27:14.40:88,14,0	0/1:7,4:13:6.26:112,0,6	1/1:7,7:13:21.05:230,21,0	1/1:10,4:14:21.04:230,21,0	0/0:19,0:18:26.70:0,27,123	0/0:15,0:15:15.36:0,15,67	0/0:15,0:15:16.63:0,17,59	0/0:14,0:14:36.09:0,36,505	0/1:10,0:9:19.78:20,0,32	0/0:18,0:18:14.90:0,15,65	0/1:21,0:21:11.61:12,0,93	0/0:18,0:16:11.37:0,11,135	0/0:22,0:22:12.98:0,13,54	0/0:7,0:6:0:0,0,0	0/0:8,0:7:0:0,0,0	0/0:10,0:9:2.50:0,2,9	0/0:11,0:11:8.13:0,8,23	0/0:19,0:19:11.04:0,11,42	0/0:20,0:20:17.84:0,18,91	0/0:17,0:17:8.38:0,8,47	0/0:5,0:5:2.37:0,2,8
chr10	31246833	.	G	GTA	5092.78	PASS	AB=0.615;AC=37;AF=0.685;AN=54;BaseQRankSum=2.970;DP=465;FS=1.170;HRun=0;HaplotypeScore=179.5150;InbreedingCoeff=0.5070;MQ=40.29;MQ0=12;MQRankSum=-4.598;QD=13.84;ReadPosRankSum=1.192;VQSLOD=4.8757;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,16:27:2.81:266,3,0	1/1:3,10:13:8.77:147,9,0	./.	0/0:13,0:4:5.93:0,6,59	0/1:6,12:18:0.13:0,0,0	1/1:6,8:14:12.04:201,12,0	0/0:5,12:17:2.22:0,2,7	1/1:29,0:29:50.54:336,51,0	0/0:11,0:11:26.91:0,27,226	0/0:18,0:17:43.89:0,44,339	0/0:16,0:16:32.72:0,33,242	1/1:9,18:26:14.09:516,14,0	1/1:6,8:13:21.07:351,21,0	1/1:7,12:19:21.07:331,21,0	0/0:14,0:14:42.10:0,42,569	0/1:2,11:12:1.90:278,0,2	1/1:7,14:21:19.22:364,19,0	0/1:10,12:23:10.94:341,0,11	1/1:9,9:17:5.90:271,6,0	1/1:14,12:26:5.01:230,5,0	1/1:11,0:10:2.59:15,3,0	0/1:3,5:7:0:0,0,0	1/1:8,3:10:3.01:47,3,0	1/1:2,10:12:18.06:293,18,0	1/1:10,13:23:15.05:248,15,0	1/1:12,6:17:27.57:433,28,0	0/1:10,9:19:13.29:378,0,13	1/1:3,1:4:0.93:46,1,0
chr10	31247184	.	C	CG	21429.80	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=9.102;DP=707;FS=3.002;HRun=2;HaplotypeScore=126.8795;InbreedingCoeff=0.9908;MQ=68.89;MQ0=1;MQRankSum=-3.520;QD=35.42;ReadPosRankSum=4.180;VQSLOD=4.4224;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,48:53:99:1722,120,0	1/1:0,9:9:24.08:345,24,0	0/0:21,0:20:60.19:0,60,738	0/0:27,0:25:69.06:0,69,818	1/1:2,20:21:50.72:712,51,0	1/1:0,13:13:36.12:518,36,0	1/1:1,25:26:66.22:949,66,0	1/1:2,28:29:81.24:1110,81,0	0/0:25,0:25:74.97:0,75,874	1/1:0,19:19:57.19:818,57,0	1/1:4,12:14:33.11:475,33,0	1/1:1,21:21:57.19:820,57,0	1/1:1,31:32:84.28:1208,84,0	1/1:0,24:24:63.21:906,63,0	0/0:29,0:29:81.24:0,81,990	1/1:0,15:15:36.12:518,36,0	1/1:1,32:33:81.27:1165,81,0	1/1:1,40:41:99:1448,102,0	1/1:2,15:15:42.14:602,42,0	1/1:0,26:26:45.15:639,45,0	1/1:2,38:40:99:1510,105,0	1/1:3,20:23:51.17:734,51,0	1/1:1,22:23:54.10:728,54,0	1/1:1,30:31:72.24:1034,72,0	1/1:0,23:23:51.17:733,51,0	1/1:0,32:32:90.23:1270,90,0	1/1:0,31:31:90.30:1293,90,0	1/1:0,4:4:12.04:173,12,0
chr10	31249810	.	ATGGG	A	21548.78	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=12.750;DP=597;FS=5.826;HRun=0;HaplotypeScore=146.5521;InbreedingCoeff=0.9894;MQ=79.03;MQ0=0;MQRankSum=-10.198;QD=44.43;ReadPosRankSum=-0.366;VQSLOD=4.7783;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,26:31:60.21:1102,60,0	1/1:0,4:4:12.04:223,12,0	0/0:20,0:20:39.13:0,39,994	0/0:19,0:19:45.15:0,45,1145	1/1:1,14:15:30.10:551,30,0	1/1:3,16:18:48.16:876,48,0	1/1:2,22:24:66.23:1197,66,0	1/1:4,17:21:45.15:833,45,0	0/0:32,0:32:96.32:0,96,2506	1/1:3,18:21:51.17:945,51,0	1/1:1,13:14:30.10:507,30,0	1/1:2,38:40:99:1807,99,0	1/1:1,21:22:63.22:1175,63,0	1/1:0,21:21:57.15:1028,57,0	0/0:41,0:41:99:0,117,3096	1/1:0,15:15:45.15:840,45,0	1/1:1,19:20:39.13:728,39,0	1/1:2,19:21:51.17:918,51,0	1/1:1,24:25:72.25:1339,72,0	1/1:2,17:19:42.14:741,42,0	1/1:3,12:15:20.95:356,21,0	1/1:0,17:17:45.15:776,45,0	1/1:2,13:15:42.14:749,42,0	1/1:5,18:23:36.12:621,36,0	1/1:0,18:18:45.15:823,45,0	1/1:0,29:29:87.30:1619,87,0	1/1:2,26:28:74.83:1347,75,0	1/1:0,8:8:24.08:448,24,0
chr10	31250257	.	CGGGTG	C	24240.57	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=13.830;DP=630;FS=13.910;HRun=0;HaplotypeScore=138.4082;InbreedingCoeff=0.9931;MQ=82.49;MQ0=0;MQRankSum=-7.995;QD=51.14;ReadPosRankSum=3.423;VQSLOD=4.8002;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,37:40:81.28:1755,81,0	1/1:0,5:5:15.05:325,15,0	0/0:24,0:25:72.14:0,72,2121	0/0:18,0:17:45.15:0,45,1377	1/1:2,19:21:27.09:584,27,0	1/1:0,16:16:39.13:846,39,0	1/1:2,22:24:60.20:1300,60,0	1/1:5,19:24:57.19:1211,57,0	0/0:28,0:28:78.27:0,78,2456	0/0:26,0:26:75.24:0,75,2140	0/0:22,0:22:57.16:0,57,1546	1/1:0,24:24:60.21:1301,60,0	1/1:1,19:20:57.20:1234,57,0	1/1:2,14:16:39.13:847,39,0	0/0:37,0:37:99:0,111,3513	1/1:0,30:30:84.29:1821,84,0	1/1:1,37:38:93.32:2019,93,0	1/1:0,28:28:78.27:1692,78,0	1/1:4,11:15:33.11:694,33,0	1/1:2,14:16:27.09:586,27,0	1/1:2,20:22:45.15:975,45,0	1/1:0,18:18:42.14:911,42,0	1/1:0,18:18:36.12:781,36,0	1/1:1,21:22:48.16:1042,48,0	1/1:0,17:17:45.15:977,45,0	1/1:0,33:33:96.29:1972,96,0	1/1:3,17:20:48.16:1042,48,0	1/1:2,5:7:15.05:326,15,0
chr10	31251015	.	GATGAAGT	G	935.75	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=3.479;DP=348;FS=5.426;HRun=0;HaplotypeScore=108.1436;InbreedingCoeff=0.9595;MQ=71.85;MQ0=0;MQRankSum=-6.318;QD=58.48;ReadPosRankSum=0.311;VQSLOD=3.2486;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:72.25:0,72,2759	0/0:4,0:4:12.04:0,12,447	0/0:10,0:10:27.02:0,27,844	0/0:10,0:10:26.85:0,27,768	0/0:7,0:7:21.07:0,21,801	0/0:9,0:9:27.09:0,27,1057	0/0:9,0:9:21.07:0,21,828	0/0:20,0:20:60.21:0,60,2313	0/0:11,0:11:33.11:0,33,1208	1/1:0,6:6:18.06:462,18,0	1/1:1,9:10:24.08:593,24,0	0/0:17,0:17:48.16:0,48,1930	0/0:9,0:9:27.09:0,27,1049	0/0:24,0:24:69.22:0,69,2573	0/0:12,0:12:36.12:0,36,1404	0/0:17,0:17:51.18:0,51,2035	0/0:13,0:13:39.13:0,39,1568	0/0:20,0:20:57.20:0,57,2180	0/0:12,0:12:33.11:0,33,1259	0/0:5,0:5:15.05:0,15,476	0/0:19,0:19:57.18:0,57,2140	0/0:11,0:11:33.11:0,33,1232	0/0:8,0:8:24.08:0,24,883	0/0:12,0:12:36.12:0,36,1441	0/0:7,0:7:21.07:0,21,801	0/0:10,0:10:30.10:0,30,1138	0/0:25,0:24:75.26:0,75,2906	0/0:7,0:7:21.07:0,21,847
chr10	31251500	.	A	AGAG	32944.07	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=1.620;DP=746;FS=13.058;HRun=0;HaplotypeScore=120.6708;InbreedingCoeff=0.9908;MQ=85.37;MQ0=0;MQRankSum=-8.320;QD=51.96;ReadPosRankSum=3.362;VQSLOD=6.2592;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,37:45:90.25:2035,90,0	1/1:1,5:6:11.91:245,12,0	0/0:25,0:25:63.19:0,63,1001	0/0:27,0:27:71.95:0,72,1059	1/1:1,22:23:54.14:1153,54,0	1/1:3,29:32:69.24:1555,69,0	1/1:4,23:30:66.23:1439,66,0	1/1:4,22:27:66.21:1402,66,0	0/0:25,0:25:72.23:0,72,1173	1/1:0,25:25:75.25:1631,75,0	1/1:4,12:16:33.11:690,33,0	1/1:0,24:25:63.22:1421,63,0	1/1:2,25:28:72.25:1625,72,0	1/1:5,28:33:78.27:1760,78,0	0/0:35,0:35:99:0,102,1638	1/1:2,11:13:27.09:612,27,0	1/1:4,29:33:75.21:1620,75,0	1/1:4,43:48:99:2710,120,0	1/1:5,16:21:51.15:1040,51,0	1/1:4,22:26:60.20:1286,60,0	1/1:2,31:35:68.90:1558,69,0	1/1:1,16:17:39.13:809,39,0	1/1:2,21:25:54.18:1166,54,0	1/1:2,34:36:96.33:2170,96,0	1/1:2,19:21:51.18:1154,51,0	1/1:2,17:21:57.09:1092,57,0	1/1:1,31:34:90.31:2028,90,0	1/1:0,12:13:33.11:743,33,0
chr10	31254674	.	CAATA	C	928.44	PASS	AC=22;AF=0.500;AN=44;BaseQRankSum=5.318;DP=267;FS=0.971;HRun=0;HaplotypeScore=42.2992;InbreedingCoeff=0.6255;MQ=61.47;MQ0=0;MQRankSum=0.393;QD=9.67;ReadPosRankSum=1.591;VQSLOD=1.6431;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:21.07:0,21,485	0/0:6,0:6:9.03:0,9,206	./.	./.	0/0:12,0:12:6.02:0,6,138	0/0:4,0:10:9.03:0,9,157	0/0:10,0:10:6.02:0,6,115	0/0:25,0:25:1.25:0,1,3	0/0:7,0:7:3.01:0,3,70	1/1:8,0:8:2.60:10,3,0	1/1:8,0:8:8.49:47,8,0	1/1:6,2:8:6.02:92,6,0	1/1:4,3:7:9.03:138,9,0	1/1:0,3:3:3.01:46,3,0	./.	1/1:7,0:9:3:28,3,0	0/0:24,0:24:24.08:0,24,559	1/1:11,9:20:24.08:367,24,0	0/0:19,0:19:21.07:0,21,485	0/0:5,0:5:3.01:0,3,70	./.	1/1:4,1:5:3.01:36,3,0	./.	./.	0/0:11,0:11:9.03:0,9,206	1/1:6,1:7:3.01:46,3,0	1/1:3,2:5:6.02:92,6,0	1/1:8,8:16:12.04:183,12,0
chr10	31254722	.	AAAT	A	399.29	PASS	AB=1.000;AC=8;AF=0.148;AN=54;BaseQRankSum=8.905;DP=281;FS=11.100;HRun=0;HaplotypeScore=41.1963;InbreedingCoeff=0.3323;MQ=65.26;MQ0=0;MQRankSum=2.083;QD=5.25;ReadPosRankSum=2.418;VQSLOD=-0.1979;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:39.13:0,39,715	0/0:5,0:5:15.05:0,15,261	0/0:6,0:5:15.04:0,15,170	./.	0/0:7,0:7:21.06:0,21,306	0/0:9,0:9:18.06:0,18,254	0/0:7,0:7:21.05:0,21,263	0/0:28,0:28:76.46:0,76,853	0/0:10,0:10:30.09:0,30,406	1/1:0,8:8:24.08:336,24,0	1/1:0,5:5:12:162,12,0	0/1:7,0:7:3.14:3,0,150	0/1:9,0:9:9.49:9,0,178	0/0:10,0:10:11.96:0,12,226	0/0:5,0:5:15.04:0,15,170	0/0:5,0:5:1.29:0,1,91	0/0:24,0:24:64.44:0,64,988	0/1:30,0:30:13.05:13,0,598	0/0:18,0:18:51.12:0,51,790	0/0:11,0:11:33.09:0,33,406	0/0:2,0:2:6.02:0,6,68	0/0:4,0:4:7.65:0,8,100	0/0:2,0:2:6.02:0,6,68	0/0:4,0:4:12.03:0,12,136	0/0:13,0:13:39.12:0,39,533	0/0:6,0:6:5.95:0,6,158	0/0:16,0:16:23.80:0,24,452	0/1:17,0:17:9.53:10,0,268
chr10	31255669	.	A	ACATGTGTG	3546.28	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-6.914;DP=895;FS=6.319;HRun=0;HaplotypeScore=213.1964;InbreedingCoeff=0.9935;MQ=62.80;MQ0=4;MQRankSum=-5.611;QD=58.14;ReadPosRankSum=1.314;VQSLOD=3.0198;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:96.29:0,96,2340	0/0:8,0:8:21.07:0,21,489	0/0:57,0:36:59.02:0,59,1168	0/0:62,0:37:65.94:0,66,1384	0/0:26,0:26:63.19:0,63,1509	0/0:20,0:20:51.14:0,51,1227	0/0:28,0:28:57.17:0,57,1356	0/0:42,0:42:90.24:0,90,1874	0/0:29,0:29:81.26:0,81,2007	1/1:13,23:44:81.25:2905,81,0	1/1:5,9:17:17.80:641,18,0	0/0:36,0:36:96.24:0,96,2140	0/0:28,0:28:63.20:0,63,1590	0/0:23,0:23:54.15:0,54,1337	0/0:36,0:36:75.69:0,76,1759	0/0:37,0:37:87.30:0,87,2244	0/0:33,0:35:65.98:0,66,1805	0/0:20,0:20:48.13:0,48,1145	0/0:26,0:26:48.10:0,48,989	0/0:28,0:28:66.23:0,66,1682	0/0:62,0:62:99:0,147,3637	0/0:20,0:20:60.18:0,60,1464	0/0:29,0:29:72.23:0,72,1831	0/0:35,0:35:71:0,71,1995	0/0:29,0:29:78.23:0,78,1852	0/0:32,0:32:78.23:0,78,1809	0/0:31,0:30:66.12:0,66,1399	0/0:15,0:15:42.03:0,42,822
chr10	31257977	.	GTGA	G	545.09	PASS	AB=0.801;AC=2;AF=0.036;AN=56;BaseQRankSum=6.472;DP=713;FS=3.626;HRun=0;HaplotypeScore=102.5048;InbreedingCoeff=-0.0371;MQ=79.18;MQ0=0;MQRankSum=-6.495;QD=10.90;ReadPosRankSum=-0.252;VQSLOD=3.3524;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,117,2801	0/0:10,0:10:30.10:0,30,739	0/0:28,0:27:78.27:0,78,1764	0/0:19,0:19:52.42:0,52,1157	0/0:19,0:19:57.18:0,57,1340	0/0:15,0:15:45.15:0,45,1100	0/0:25,0:25:75.24:0,75,1795	0/0:22,0:22:63.22:0,63,1533	0/0:19,0:19:54.19:0,54,1296	0/1:29,15:44:99:597,0,2018	0/1:5,1:6:37.09:37,0,209	0/0:29,0:29:87.30:0,87,2132	0/0:34,0:34:99:0,102,2487	0/0:41,0:41:99:0,123,2995	0/0:33,0:33:99:0,99,2364	0/0:16,0:16:48.16:0,48,1179	0/0:31,0:31:93.32:0,93,2264	0/0:37,0:37:99:0,111,2733	0/0:17,0:17:48.15:0,48,1133	0/0:22,0:22:66.21:0,66,1576	0/0:45,0:45:99:0,135,3274	0/0:12,0:12:36.12:0,36,887	0/0:26,0:26:78.27:0,78,1908	0/0:28,0:28:84.29:0,84,2069	0/0:28,0:28:78.27:0,78,1892	0/0:31,0:31:93.31:0,93,2246	0/0:19,0:19:57.20:0,57,1391	0/0:17,0:17:51.16:0,51,1207
chr10	31257984	.	CTG	C	455.14	PASS	AB=0.690;AC=2;AF=0.036;AN=56;BaseQRankSum=6.879;DP=728;FS=3.354;HRun=0;HaplotypeScore=89.7653;InbreedingCoeff=-0.0370;MQ=79.84;MQ0=0;MQRankSum=-5.323;QD=8.43;ReadPosRankSum=-0.620;VQSLOD=2.7969;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,120,2305	0/0:10,0:10:30.10:0,30,571	0/0:30,0:29:65.29:0,65,1380	0/0:19,0:19:48.11:0,48,819	0/0:19,0:19:57.20:0,57,1060	0/0:13,0:13:36.12:0,36,675	0/0:27,0:27:81.25:0,81,1497	0/0:24,0:24:66.22:0,66,1232	0/0:20,0:20:57.18:0,57,1047	0/1:29,16:45:99:513,0,1521	0/1:4,5:9:30.65:31,0,106	0/0:30,0:30:90.29:0,90,1704	0/0:34,0:34:99:0,102,1875	0/0:39,0:39:99:0,114,2163	0/0:32,0:32:96.33:0,96,1845	0/0:18,0:18:54.19:0,54,1042	0/0:31,0:31:90.29:0,90,1660	0/0:36,0:36:99:0,105,2026	0/0:17,0:17:48.16:0,48,913	0/0:23,0:23:69.24:0,69,1331	0/0:43,0:43:99:0,126,2237	0/0:14,0:14:42.14:0,42,803	0/0:26,0:26:75.26:0,75,1432	0/0:28,0:28:78.27:0,78,1491	0/0:29,0:29:84.29:0,84,1604	0/0:33,0:33:96.16:0,96,1798	0/0:18,0:18:54.19:0,54,1043	0/0:19,0:19:57.20:0,57,1071
chr10	31258283	.	CT	C	13402.56	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=6.320;DP=674;FS=2.781;HRun=9;HaplotypeScore=70.3075;InbreedingCoeff=0.9818;MQ=75.79;MQ0=0;MQRankSum=-3.770;QD=22.95;ReadPosRankSum=2.444;VQSLOD=5.8729;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,52:53:99:1291,141,0	1/1:1,4:5:9:82,9,0	0/0:16,0:17:29.41:0,29,323	0/0:15,0:15:24:0,24,256	1/1:6,9:15:29.96:266,30,0	1/1:2,23:25:60.02:549,60,0	1/1:3,27:31:80.07:720,80,0	1/1:4,27:31:80.90:715,81,0	0/0:25,0:25:72.21:0,72,831	1/1:1,21:22:60:549,60,0	1/1:0,14:14:42.02:384,42,0	1/1:4,29:33:69.03:632,69,0	1/1:0,19:19:54.03:494,54,0	1/1:5,28:33:72.03:659,72,0	0/0:33,0:33:67.19:0,67,980	1/1:3,23:26:66.03:604,66,0	1/1:1,38:39:99:989,108,0	1/1:3,24:27:63.03:576,63,0	1/1:0,14:14:42:378,42,0	1/1:2,11:13:32.96:292,33,0	1/1:4,30:34:80.79:741,81,0	1/1:0,15:15:42.02:384,42,0	1/1:1,17:18:48.02:439,48,0	1/1:4,36:40:99:961,105,0	1/1:2,18:20:48.03:439,48,0	1/1:3,21:24:63.01:571,63,0	1/1:4,18:22:54.02:494,54,0	1/1:4,7:10:21.01:192,21,0
chr10	31258681	.	CGTGTGT	C	86.45	PASS	AB=0.930;AC=6;AF=0.143;AN=42;BaseQRankSum=2.526;DP=488;FS=8.939;HRun=0;HaplotypeScore=88.7865;InbreedingCoeff=0.2125;MQ=63.76;MQ0=7;MQRankSum=-1.082;QD=1.92;ReadPosRankSum=1.931;VQSLOD=0.9632;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:3:0,3,25	0/0:2,0:2:3.01:0,3,42	./.	./.	0/0:10,0:10:3.01:0,3,38	./.	./.	0/0:33,0:32:0.89:0,1,2	0/0:13,0:13:3.01:0,3,46	0/0:19,0:19:9:0,9,185	0/0:9,0:8:6.02:0,6,175	0/0:13,0:13:0:0,0,0	0/1:14,1:15:3.94:54,0,4	0/0:18,0:19:2.03:0,2,20	0/0:22,0:23:15.04:0,15,353	0/1:11,1:12:25.22:53,0,25	0/0:32,1:31:10.23:0,10,71	0/0:21,0:21:4.54:0,5,27	./.	./.	0/0:50,0:49:0:0,0,0	0/0:10,0:10:3.01:0,3,52	./.	0/0:27,0:25:0:0,0,0	0/0:9,0:9:3:0,3,28	0/0:8,0:8:6.59:0,7,35	1/1:9,0:8:2.96:19,3,0	1/1:8,1:9:3:59,3,0
chr10	31258741	.	T	TGG	417.05	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=-1.830;DP=450;FS=0.766;HRun=1;HaplotypeScore=64.8531;InbreedingCoeff=0.8403;MQ=75.85;MQ0=9;MQRankSum=3.781;QD=16.68;ReadPosRankSum=-0.315;VQSLOD=0.6293;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:65.83:0,66,523	0/1:1,0:1:0:0,0,0	0/0:29,0:20:40.31:0,40,429	0/0:36,0:27:51:0,51,551	0/0:10,0:10:20.97:0,21,176	0/0:12,0:12:26.80:0,27,211	0/0:16,0:16:34.57:0,35,280	0/0:21,0:21:56.73:0,57,490	0/0:10,0:10:29.75:0,30,224	1/1:0,19:19:56.35:474,56,0	1/1:5,0:4:5.73:54,6,0	0/0:17,0:16:41.95:0,42,349	0/0:13,0:13:29.97:0,30,252	0/0:11,0:10:23.55:0,24,198	0/0:18,0:17:9.54:0,10,286	0/0:12,0:11:25.89:0,26,210	0/0:25,0:25:39.82:0,40,460	0/0:14,0:13:23.89:0,24,185	0/0:12,0:12:35.96:0,36,311	0/0:10,0:10:26.75:0,27,219	0/0:26,0:26:59.90:0,60,492	0/0:19,0:19:38.92:0,39,316	0/0:11,0:11:20.87:0,21,168	0/0:23,0:22:56.77:0,57,445	0/0:17,0:17:32.94:0,33,272	0/0:15,0:15:13.96:0,14,307	0/0:14,0:14:34.94:0,35,286	0/0:9,0:9:26.95:0,27,222
chr10	31259166	.	A	ATCCCTC	45389.01	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-9.775;DP=663;FS=3.085;HRun=0;HaplotypeScore=109.9851;InbreedingCoeff=0.9721;MQ=76.20;MQ0=0;MQRankSum=-14.237;QD=79.77;ReadPosRankSum=2.684;VQSLOD=6.0924;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,23:33:69.13:2302,69,0	1/1:0,12:14:29.73:1001,30,0	0/0:24,0:24:72.19:0,72,1583	0/0:20,0:20:54.12:0,54,1095	1/1:2,19:28:57.20:2037,57,0	1/1:1,18:25:54.12:1879,54,0	1/1:4,20:34:69.24:2479,69,0	1/1:11,25:45:99:4078,126,0	0/0:22,0:22:66.23:0,66,1567	1/1:1,30:38:99:3417,105,0	1/1:1,10:12:27.09:980,27,0	1/1:0,14:18:38.87:1421,39,0	1/1:2,21:27:63.22:2294,63,0	1/1:1,20:24:63.22:2283,63,0	0/0:28,0:27:81.28:0,81,1971	1/1:2,28:33:7.40:2751,7,0	1/1:0,15:18:39.13:1423,39,0	1/1:0,7:9:18.06:658,18,0	1/1:4,18:30:84.22:2552,84,0	1/1:3,18:21:57.20:2002,57,0	1/1:4,9:16:24.06:876,24,0	1/1:2,12:15:36:1130,36,0	1/1:4,11:19:33.11:1136,33,0	1/1:1,11:17:26.81:971,27,0	1/1:0,17:21:42.14:1532,42,0	1/1:2,23:30:87.28:2864,87,0	1/1:3,24:31:75.26:2715,75,0	1/1:1,5:11:18.06:607,18,0
chr10	31259435	.	GATAT	G	543	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-1.330;DP=583;FS=25.398;HRun=0;HaplotypeScore=200.1004;InbreedingCoeff=0.8588;MQ=63.04;MQ0=5;MQRankSum=4.459;QD=22.62;ReadPosRankSum=2.721;VQSLOD=1.7253;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:32.78:0,33,403	0/0:9,0:9:21.50:0,21,223	0/0:20,0:15:34.75:0,35,536	0/0:17,0:14:35.75:0,36,489	0/0:20,0:19:24.83:0,25,231	0/0:25,0:25:38.32:0,38,246	0/0:20,0:20:31.19:0,31,382	0/0:39,0:39:84.16:0,84,1344	0/0:22,0:22:63.20:0,63,1288	1/1:4,9:13:1.82:312,2,0	1/1:11,0:11:21.07:337,21,0	0/0:14,0:14:16.40:0,16,97	0/0:31,0:31:52.35:0,52,472	0/0:15,0:15:29.10:0,29,286	0/0:27,0:26:56.41:0,56,809	0/0:30,0:30:63.41:0,63,486	0/0:13,0:13:16.87:0,17,213	0/0:15,0:15:34.29:0,34,369	0/0:21,0:21:57.90:0,58,706	0/0:25,0:25:30.75:0,31,350	0/0:26,0:26:41.12:0,41,609	0/0:22,0:22:41.82:0,42,462	0/0:21,0:21:27.94:0,28,397	0/0:14,0:14:18.17:0,18,213	0/0:18,0:18:24.39:0,24,262	0/0:36,0:36:92.86:0,93,1174	0/0:23,0:23:45.51:0,46,411	0/0:14,0:14:25.99:0,26,279
chr10	31259444	.	ATGTGTGTGTGTGTG	A	16160.48	PASS	AB=0.644;AC=42;AF=0.750;AN=56;BaseQRankSum=4.185;DP=553;FS=3.109;HRun=0;HaplotypeScore=225.2578;InbreedingCoeff=0.5980;MQ=59.47;MQ0=5;MQRankSum=-7.630;QD=36.56;ReadPosRankSum=3.522;VQSLOD=4.3638;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,9:24:12.04:433,12,0	1/1:4,6:10:15.05:585,15,0	0/0:17,0:12:0:0,0,0	0/0:17,0:14:9.03:0,9,400	1/1:6,14:19:19:708,19,0	1/1:7,19:27:48.16:1851,48,0	1/1:12,10:22:20.76:801,21,0	1/1:27,0:27:8.62:81,9,0	0/0:20,0:22:39.12:0,39,2334	0/0:18,0:18:37.07:0,37,1751	0/0:10,0:10:3.95:0,4,95	1/1:3,12:15:18.46:711,18,0	1/1:10,17:27:39.13:1542,39,0	1/1:5,11:16:18.06:708,18,0	0/0:10,0:25:42.14:0,42,1816	1/1:7,21:29:57.19:2239,57,0	1/1:6,6:12:1.20:116,1,0	0/1:6,7:13:82.80:461,0,83	1/1:11,10:21:30.02:985,30,0	1/1:10,9:20:15.05:547,15,0	1/1:19,5:24:5.23:232,5,0	0/1:10,11:23:99:482,0,160	1/1:16,6:22:6.49:238,6,0	1/1:7,5:13:8.99:273,9,0	1/1:5,12:17:12.04:472,12,0	1/1:19,12:32:39.11:1282,39,0	1/1:8,14:22:29.43:1177,29,0	1/1:4,2:6:6.02:238,6,0
chr10	31260177	.	AC	A	1657.35	PASS	AB=0.986;AC=32;AF=0.571;AN=56;BaseQRankSum=9.292;DP=545;FS=1.429;HRun=1;HaplotypeScore=97.8869;InbreedingCoeff=-0.1521;MQ=46.90;MQ0=23;MQRankSum=-6.965;QD=4.76;ReadPosRankSum=5.115;VQSLOD=0.7175;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:22:42.26:216,42,0	1/1:10,0:10:18.77:69,19,0	0/0:67,0:8:11.95:0,12,182	0/0:77,0:15:6.70:0,7,127	0/1:33,0:32:76.69:188,0,77	1/1:12,0:12:19.70:92,20,0	0/1:7,0:7:17.09:17,0,36	0/1:22,0:22:70.39:128,0,70	0/1:16,0:15:4.44:4,0,354	0/0:25,2:27:58.42:0,58,786	0/0:24,1:25:7.90:0,8,397	0/1:11,0:11:33.57:41,0,34	1/1:4,0:4:10.30:43,10,0	0/1:8,0:8:23.99:24,0,33	0/1:14,1:15:50.24:50,0,247	0/1:8,0:8:14.59:28,0,15	0/1:19,0:19:20.41:47,0,20	0/1:18,0:18:4.80:90,0,5	0/1:16,0:16:5.80:78,0,6	0/1:22,1:21:6.98:131,0,7	1/1:6,0:5:4.30:16,4,0	1/1:6,0:6:7.77:20,8,0	1/1:9,0:9:17.19:79,17,0	0/1:6,1:7:23.85:24,0,31	0/1:24,0:23:22.10:65,0,22	0/1:29,0:28:24.52:185,0,25	0/1:8,0:8:5.92:32,0,6	1/1:13,2:15:31.81:161,32,0
chr10	31260186	.	AGC	A	3911.25	PASS	AB=0.812;AC=24;AF=0.429;AN=56;BaseQRankSum=5.496;DP=560;FS=91.485;HRun=0;HaplotypeScore=98.3335;InbreedingCoeff=-0.7209;MQ=45.00;MQ0=24;MQRankSum=-8.208;QD=9.54;ReadPosRankSum=1.214;VQSLOD=-0.5412;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:18,10:28:55.83:360,0,56	0/1:10,1:10:13.97:113,0,14	0/0:63,0:7:2.76:0,3,65	0/0:74,0:15:8.66:0,9,113	0/1:25,10:34:50.63:421,0,51	0/1:14,0:14:26.03:157,0,26	0/1:3,2:5:6.95:74,0,7	0/1:17,8:25:44.49:369,0,44	0/1:15,2:15:62.64:63,0,322	0/1:24,3:26:66.35:66,0,601	0/1:21,4:25:99:250,0,249	0/1:2,8:10:16.60:62,0,17	0/1:4,0:4:3.95:52,0,4	0/1:2,8:10:20.10:29,0,20	0/1:14,1:15:77.46:77,0,250	0/1:2,8:10:16.71:47,0,17	0/1:4,16:20:28.04:71,0,28	0/1:14,5:19:13.53:263,0,14	0/1:15,4:19:99:198,0,117	0/1:23,1:21:58.74:220,0,59	0/0:5,0:5:4.91:0,5,21	0/0:7,0:6:14.38:0,14,74	0/1:8,1:9:20.59:116,0,21	0/1:4,0:4:7.11:7,0,8	0/1:7,18:25:45.82:243,0,46	0/1:24,3:26:87.18:391,0,87	0/1:9,1:9:46.65:165,0,47	0/1:15,2:15:27.28:99,0,27
chr10	31261006	.	CT	C	342.49	PASS	AB=0.948;AC=7;AF=0.130;AN=54;BaseQRankSum=-4.853;DP=439;FS=18.565;HRun=11;HaplotypeScore=63.8821;InbreedingCoeff=0.4364;MQ=38.55;MQ0=47;MQRankSum=-3.157;QD=4.63;ReadPosRankSum=1.292;VQSLOD=0.3139;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,1:21:34.34:0,34,272	0/0:3,0:3:8.99:0,9,80	0/0:7,0:1:2.96:0,3,19	./.	0/0:28,0:28:30.85:0,31,279	0/0:16,0:16:18.02:0,18,168	0/0:11,0:11:29.48:0,29,269	0/0:26,0:24:32.75:0,33,284	0/0:11,0:9:10.65:0,11,78	1/1:10,10:19:26.64:217,27,0	1/1:9,11:18:29.52:239,30,0	0/1:10,1:10:5.67:6,0,121	0/0:6,0:6:8.47:0,8,40	0/0:13,0:10:20.99:0,21,209	0/0:24,0:20:23.82:0,24,213	0/0:10,1:9:17.86:0,18,161	0/0:22,1:19:20.60:0,21,184	0/0:20,0:17:24.06:0,24,256	0/0:20,1:15:5.35:0,5,248	0/0:17,0:15:20.38:0,20,151	0/0:10,0:9:12.47:0,12,117	0/1:10,0:10:5.01:5,0,122	0/1:12,1:12:4.36:4,0,144	0/0:7,0:4:3.01:0,3,32	0/0:24,0:21:36.08:0,36,333	0/0:9,0:11:17.58:0,18,131	0/0:22,0:20:27.80:0,28,252	0/0:19,0:14:8.95:0,9,74
chr10	31263346	.	T	TGTC	4013.79	PASS	AB=1.000;AC=44;AF=0.815;AN=54;BaseQRankSum=-5.409;DP=315;FS=12.855;HRun=0;HaplotypeScore=67.9218;InbreedingCoeff=0.5966;MQ=73.88;MQ0=2;MQRankSum=-2.887;QD=16.25;ReadPosRankSum=0.598;VQSLOD=1.6617;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:15:25.59:431,26,0	1/1:2,0:2:6.02:91,6,0	0/0:27,0:21:42.46:0,42,600	0/0:24,0:17:34.34:0,34,400	1/1:13,0:13:24.07:336,24,0	1/1:9,5:14:2.92:62,3,0	1/1:19,1:20:22.89:306,23,0	1/1:14,0:13:28.44:393,28,0	0/0:7,0:7:16.87:0,17,232	1/1:22,0:22:51.15:657,51,0	1/1:12,0:12:24.04:360,24,0	0/1:7,0:7:0.19:0,0,0	1/1:8,0:8:2.86:18,3,0	1/1:11,0:11:2.80:49,3,0	0/0:3,0:3:3.01:0,3,46	1/1:6,0:6:6.02:97,6,0	1/1:13,0:12:9.50:131,9,0	1/1:7,0:7:6.01:93,6,0	1/1:8,0:8:15:186,15,0	1/1:7,0:7:5.93:67,6,0	1/1:11,0:11:11.98:162,12,0	1/1:5,0:5:3.95:37,4,0	1/1:7,0:7:6.01:80,6,0	1/1:10,0:10:6.02:79,6,0	1/1:17,0:17:9.39:135,9,0	1/1:11,0:11:18.03:244,18,0	0/1:7,0:7:0:0,0,0	./.
chr10	31263349	.	C	CGT	4047.76	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-5.708;DP=300;FS=6.771;HRun=0;HaplotypeScore=59.7866;InbreedingCoeff=0.5786;MQ=73.45;MQ0=2;MQRankSum=0.010;QD=18.23;ReadPosRankSum=1.605;VQSLOD=2.6950;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,5:14:28.70:449,29,0	1/1:2,0:2:6.02:91,6,0	0/0:31,0:22:50.50:0,50,595	0/0:23,0:15:30.89:0,31,388	1/1:0,13:13:24.07:336,24,0	1/1:7,1:8:2.22:33,2,0	1/1:6,16:23:22.19:305,22,0	1/1:2,9:10:27.56:391,28,0	0/0:6,0:6:15.05:0,15,227	1/1:0,19:20:51.16:699,51,0	1/1:9,2:12:23.80:359,24,0	0/0:2,5:8:1.19:0,1,2	1/1:2,6:8:2.20:16,2,0	1/1:0,10:11:3.01:49,3,0	0/0:3,0:3:3.01:0,3,46	1/1:1,3:6:6.02:97,6,0	1/1:2,12:13:9.50:131,9,0	1/1:1,6:7:5.98:92,6,0	1/1:1,4:5:12.03:166,12,0	1/1:1,6:7:3.67:63,4,0	1/1:3,3:6:11.91:161,12,0	1/1:0,5:5:3.48:36,3,0	1/1:0,6:6:6.02:80,6,0	1/1:2,8:11:6.02:99,6,0	1/1:2,15:17:8.65:148,9,0	1/1:2,7:9:18.06:244,18,0	1/1:1,6:7:0.46:1,0,0	0/0:0,7:7:0.89:0,1,2
chr10	31264170	.	ATGTGTGTG	A	781.74	PASS	AB=0.920;AC=25;AF=0.625;AN=40;BaseQRankSum=2.719;DP=380;FS=7.051;HRun=0;HaplotypeScore=98.8796;InbreedingCoeff=0.2195;MQ=72.45;MQ0=11;MQRankSum=-2.045;QD=4.27;ReadPosRankSum=-0.112;VQSLOD=1.2914;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:23:1.05:1,0,13	1/1:5,0:6:3.01:56,3,0	./.	./.	0/0:7,1:8:2.86:0,3,24	1/1:13,0:12:2.83:16,3,0	1/1:19,0:19:3.46:25,3,0	0/0:27,0:22:2.60:0,3,5	0/0:13,0:13:3.48:0,3,122	1/1:4,0:5:0.47:1,0,0	./.	1/1:12,2:14:6.02:148,6,0	1/1:8,1:8:3.01:74,3,0	./.	0/0:5,0:7:3.01:0,3,64	1/1:10,2:12:3.01:74,3,0	1/1:18,0:19:2.90:16,3,0	0/1:13,6:19:10.93:139,0,11	./.	1/1:7,0:9:6.02:112,6,0	0/0:34,0:34:2.58:0,3,33	./.	./.	1/1:15,3:18:3.01:74,3,0	./.	0/0:12,0:11:2.80:0,3,13	1/1:5,0:7:6.02:112,6,0	0/1:9,0:8:11.08:55,0,11
chr10	31266289	.	C	CAAAT	38456	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-10.251;DP=781;FS=0.403;HRun=0;HaplotypeScore=115.0757;InbreedingCoeff=0.9953;MQ=66.60;MQ0=0;MQRankSum=-7.788;QD=57.40;ReadPosRankSum=2.582;VQSLOD=6.3445;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,31:40:77.21:2291,77,0	1/1:2,12:14:26.96:693,27,0	0/0:26,0:26:62.49:0,62,998	0/0:21,0:21:36.29:0,36,727	1/1:2,29:32:86.92:1938,87,0	1/1:6,19:24:54.18:1397,54,0	1/1:4,17:22:51.18:1344,51,0	1/1:9,33:43:99:2499,114,0	0/0:35,0:35:99:0,102,1837	1/1:2,21:23:63.15:1545,63,0	1/1:4,26:30:84.03:1860,84,0	1/1:8,34:44:96.33:2487,96,0	1/1:3,25:28:63.22:1570,63,0	1/1:0,21:24:51.18:1335,51,0	0/0:29,0:29:78.24:0,78,1383	1/1:1,28:30:72.25:1894,72,0	1/1:2,29:31:66.14:1685,66,0	1/1:5,16:23:53.58:1291,54,0	1/1:4,24:31:87.10:1743,87,0	1/1:1,35:37:99:2501,99,0	1/1:4,19:22:60.21:1466,60,0	1/1:1,17:19:51.13:1233,51,0	1/1:2,20:22:54.19:1361,54,0	1/1:3,22:28:47.83:1250,48,0	1/1:5,21:27:51.17:1279,51,0	1/1:1,26:29:78.15:1797,78,0	1/1:7,22:29:60.21:1596,60,0	1/1:1,6:14:15.05:400,15,0
chr10	31269067	.	C	CT	1250.35	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.115;DP=643;FS=5.240;HRun=4;HaplotypeScore=76.5672;InbreedingCoeff=0.9950;MQ=84.12;MQ0=0;MQRankSum=-1.481;QD=32.90;ReadPosRankSum=-0.315;VQSLOD=4.0129;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,135,1472	0/0:7,0:7:18.05:0,18,204	0/0:21,0:21:45.08:0,45,492	0/0:23,0:23:59.02:0,59,608	0/0:27,0:26:72.18:0,72,796	0/0:21,0:21:60.17:0,60,679	0/0:29,0:29:84.22:0,84,934	0/0:31,0:31:77.41:0,77,836	0/0:21,0:21:60.17:0,60,679	1/1:3,21:24:63.20:846,63,0	1/1:1,13:14:39.13:526,39,0	0/0:26,0:26:72.20:0,72,817	0/0:32,0:32:90.26:0,90,1019	0/0:24,0:24:63.14:0,63,695	0/0:24,0:24:72.18:0,72,798	0/0:22,0:22:66.18:0,66,740	0/0:18,0:17:51.09:0,51,563	0/0:23,0:23:60.15:0,60,669	0/0:15,0:15:45.11:0,45,495	0/0:16,0:16:45.13:0,45,510	0/0:34,0:34:99:0,99,1112	0/0:20,0:20:54.15:0,54,610	0/0:9,0:9:27.08:0,27,304	0/0:29,0:29:87.24:0,87,978	0/0:22,0:22:57.16:0,57,646	0/0:30,1:31:46.21:0,46,911	0/0:19,0:19:48.14:0,48,544	0/0:14,0:14:30.08:0,30,339
chr10	31269349	.	G	GA	432.50	PASS	AC=28;AF=0.778;AN=36;BaseQRankSum=5.756;DP=102;FS=20.255;HRun=0;HaplotypeScore=18.4461;InbreedingCoeff=0.5247;MQ=74.72;MQ0=2;MQRankSum=-1.678;QD=16.02;ReadPosRankSum=-5.283;VQSLOD=1.0934;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	1/1:1,0:1:3:26,3,0	0/0:9,0:8:24.08:0,24,323	0/0:14,0:9:27.07:0,27,359	./.	1/1:1,0:1:2.99:24,3,0	1/1:0,1:1:3.01:41,3,0	./.	0/0:19,0:19:48.16:0,48,671	./.	./.	1/1:0,2:2:3.01:36,3,0	1/1:2,0:2:5.99:50,6,0	1/1:1,0:1:3:25,3,0	0/0:26,0:26:72.24:0,72,1007	1/1:1,0:1:3:25,3,0	1/1:2,0:1:2.98:22,3,0	1/1:4,0:3:6.01:66,6,0	1/1:1,0:1:0.47:1,0,0	./.	./.	./.	./.	1/1:1,0:1:3.01:41,3,0	./.	1/1:2,0:2:5.99:48,6,0	1/1:1,2:3:6.02:82,6,0	1/1:5,0:5:11.80:76,12,0
chr10	31269732	.	GAAAAAAAAAAAAAGA	G	12554.39	PASS	AB=0.524;AC=43;AF=0.768;AN=56;BaseQRankSum=4.022;DP=349;FS=2.668;HRun=0;HaplotypeScore=139.5015;InbreedingCoeff=0.7995;MQ=52.18;MQ0=8;MQRankSum=-3.785;QD=53.65;ReadPosRankSum=8.166;VQSLOD=3.5883;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:1,10:11:45.05:417,0,45	1/1:1,6:7:6.02:249,6,0	0/0:33,0:11:27.09:0,27,1012	0/0:34,0:13:32.57:0,33,827	1/1:1,15:16:17.67:549,18,0	1/1:0,12:12:21.07:632,21,0	1/1:2,15:16:36.06:1046,36,0	1/1:0,17:17:50.73:870,51,0	0/0:4,0:5:15.05:0,15,994	0/0:15,0:14:39.12:0,39,1434	0/0:15,0:14:27.09:0,27,1162	1/1:0,14:14:33.03:955,33,0	1/1:0,6:6:11.87:279,12,0	1/1:1,10:11:21.06:557,21,0	0/0:11,0:13:36.11:0,36,1966	1/1:1,7:8:15.05:527,15,0	1/1:0,10:10:14.97:449,15,0	1/1:0,11:11:18.01:642,18,0	1/1:1,6:7:18:446,18,0	1/1:1,12:13:24.01:712,24,0	1/1:0,4:4:3.01:89,3,0	1/1:1,14:15:27.09:869,27,0	1/1:0,3:3:9.03:264,9,0	1/1:3,12:15:9.21:289,9,0	1/1:1,3:4:9.03:248,9,0	1/1:0,13:13:38.97:1300,39,0	1/1:0,13:13:27.09:1054,27,0	1/1:7,0:7:17.69:111,18,0
chr10	31269764	.	ATCTC	A	326.29	PASS	AB=0.996;AC=10;AF=0.200;AN=50;BaseQRankSum=1.638;DP=546;FS=0.000;HRun=0;HaplotypeScore=191.4418;InbreedingCoeff=0.3824;MQ=66.52;MQ0=9;MQRankSum=3.259;QD=1.95;ReadPosRankSum=1.120;VQSLOD=2.4303;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:16:0.43:1,0,0	0/0:6,0:6:2.99:0,3,52	0/0:59,0:33:33.08:0,33,625	0/1:65,0:34:18.70:19,0,626	0/1:24,0:23:0.05:1,0,0	./.	./.	0/0:23,0:20:34:0,34,706	0/0:12,0:12:33.11:0,33,821	0/0:15,0:15:33.11:0,33,776	0/0:15,0:15:23.82:0,24,534	./.	0/0:17,0:17:2.81:0,3,36	0/0:14,0:14:3.01:0,3,53	1/1:0,13:13:24.08:405,24,0	0/1:17,0:17:0:0,0,0	0/0:14,0:14:15.05:0,15,335	0/0:16,0:16:33.11:0,33,736	0/0:19,0:17:27.09:0,27,563	0/0:22,0:22:3.01:0,3,72	0/0:4,0:4:3.01:0,3,59	0/0:22,0:22:2.49:0,2,19	0/1:14,0:13:0.03:0,0,0	1/1:16,0:16:0.03:1,0,0	0/0:10,0:8:2.18:0,2,74	0/0:26,0:26:63.22:0,63,1373	0/0:15,0:15:27.05:0,27,472	0/0:12,0:12:30.10:0,30,632
chr10	31269947	.	CCCA	C	1739.47	PASS	AB=0.909;AC=5;AF=0.089;AN=56;BaseQRankSum=9.556;DP=682;FS=8.540;HRun=0;HaplotypeScore=99.4393;InbreedingCoeff=0.7800;MQ=77.35;MQ0=0;MQRankSum=-2.253;QD=23.19;ReadPosRankSum=0.002;VQSLOD=2.9881;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,141,3090	0/0:12,0:12:33.11:0,33,737	0/0:23,0:23:57.19:0,57,1168	0/0:16,0:16:38.16:0,38,719	0/0:17,0:17:39.13:0,39,870	0/0:19,0:19:57.20:0,57,1273	0/0:25,0:25:72.25:0,72,1607	0/0:16,0:16:45.15:0,45,1003	0/0:26,0:26:75.26:0,75,1670	1/1:1,27:28:81.25:1274,81,0	1/1:1,16:17:33.11:539,33,0	0/0:22,0:22:66.23:0,66,1473	0/0:35,0:35:99:0,102,2261	0/0:20,0:20:60.21:0,60,1340	0/0:27,0:27:81.28:0,81,1809	0/0:22,0:22:66.23:0,66,1473	0/0:30,0:30:87.30:0,87,1940	0/0:33,0:33:96.32:0,96,2082	0/0:17,0:17:48.16:0,48,1051	0/0:24,0:24:69.22:0,69,1497	0/0:56,0:56:99:0,168,3701	0/0:19,0:19:51.18:0,51,1120	0/0:15,0:15:45.15:0,45,974	0/0:31,0:31:93.28:0,93,2002	0/0:23,0:23:66.23:0,66,1423	0/1:27,3:30:56.68:57,0,1676	0/0:15,0:15:42.14:0,42,929	0/0:13,0:13:33.11:0,33,731
chr10	31270159	.	G	GAAGGA	38316.34	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-12.255;DP=837;FS=2.797;HRun=0;HaplotypeScore=134.7083;InbreedingCoeff=0.9972;MQ=88.70;MQ0=0;MQRankSum=-9.002;QD=55.69;ReadPosRankSum=1.977;VQSLOD=5.1715;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,45:60:99:3116,111,0	1/1:2,7:10:18.06:503,18,0	0/0:32,0:31:63.12:0,63,1093	0/0:45,0:43:72.76:0,73,1167	1/1:3,18:22:57.08:1522,57,0	1/1:5,14:19:36.12:1058,36,0	1/1:5,13:18:36.12:784,36,0	1/1:17,7:33:48.12:1149,48,0	0/0:28,0:28:72.23:0,72,1351	1/1:7,27:39:93.13:2412,93,0	1/1:8,24:33:60.12:1465,60,0	1/1:9,24:33:66.23:1939,66,0	1/1:11,32:46:95.94:2705,96,0	1/1:5,18:24:54.19:1537,54,0	0/0:44,0:44:99:0,117,2191	1/1:4,26:32:75.26:2205,75,0	1/1:10,24:35:67.11:1942,67,0	1/1:8,22:34:57.19:1625,57,0	1/1:5,7:20:44.99:810,45,0	1/1:2,17:22:48.16:1210,48,0	1/1:8,28:39:78.27:2201,78,0	1/1:4,15:20:45.15:1091,45,0	1/1:4,19:25:56.95:1518,57,0	1/1:5,40:47:93.32:2733,93,0	1/1:0,11:11:30.10:867,30,0	1/1:5,19:26:63.20:1774,63,0	1/1:6,18:26:51.13:1364,51,0	1/1:2,9:13:27.09:784,27,0
chr10	31272343	.	CAAAAGTACTTTT	C	2664.25	PASS	AB=0.964;AC=5;AF=0.089;AN=56;BaseQRankSum=8.350;DP=613;FS=0.000;HRun=0;HaplotypeScore=205.0464;InbreedingCoeff=0.7698;MQ=81.49;MQ0=0;MQRankSum=-7.506;QD=42.29;ReadPosRankSum=0.450;VQSLOD=3.0597;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,102,5502	0/0:19,0:19:48.16:0,48,2838	0/0:15,0:15:36.12:0,36,1556	0/0:19,0:20:45.34:0,45,1423	0/0:28,0:28:81.26:0,81,4531	0/0:18,0:18:54.19:0,54,3057	0/0:23,0:23:66.23:0,66,3903	0/0:31,0:31:90.29:0,90,4769	0/0:16,0:16:48.16:0,48,2811	1/1:4,14:18:39.13:1388,39,0	1/1:6,12:18:39.09:1361,39,0	0/0:21,0:21:63.22:0,63,3731	0/0:24,0:24:72.25:0,72,4104	0/0:24,0:24:66.19:0,66,3469	0/0:30,0:30:87.30:0,87,5263	0/0:24,0:24:69.24:0,69,3858	0/0:19,0:18:57.20:0,57,3304	0/0:24,0:24:60.20:0,60,3467	0/0:16,0:16:48.16:0,48,2651	0/0:23,0:24:66.21:0,66,3407	0/0:19,0:19:54.19:0,54,3208	0/0:21,0:21:60.21:0,60,3627	0/0:22,0:22:63.22:0,63,3479	0/0:17,0:17:48.12:0,48,2741	0/0:19,0:19:57.17:0,57,2973	0/1:26,1:27:45.64:46,0,3518	0/0:35,0:34:99:0,102,5746	0/0:4,0:4:12.04:0,12,720
chr10	31273523	.	ATTTT	A	15433.53	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-4.710;DP=649;FS=3.928;HRun=14;HaplotypeScore=125.2498;InbreedingCoeff=0.9746;MQ=73.80;MQ0=3;MQRankSum=-1.851;QD=27.96;ReadPosRankSum=6.418;VQSLOD=3.5349;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,14:17:36.06:509,36,0	1/1:2,8:11:19.26:258,19,0	0/0:27,0:22:36.10:0,36,521	0/0:21,0:15:16.51:0,17,290	1/1:3,25:29:56.95:787,57,0	1/1:3,18:23:55.36:748,55,0	1/1:5,15:20:39.05:552,39,0	1/1:15,31:46:89.88:1251,90,0	0/0:8,0:21:50.36:0,50,656	1/1:5,1:27:11.44:104,11,0	1/1:4,0:15:10.99:28,11,0	1/1:3,18:21:46.38:638,46,0	1/1:6,18:24:48.02:678,48,0	1/1:4,13:17:36.07:509,36,0	0/0:12,0:27:72.13:0,72,925	1/1:4,18:22:45.06:636,45,0	1/1:3,18:21:45.06:637,45,0	1/1:2,20:22:48.13:679,48,0	1/1:2,15:17:45.11:615,45,0	1/1:1,24:25:69.19:976,69,0	1/1:4,25:30:66.12:915,66,0	1/1:1,17:18:32.96:466,33,0	1/1:6,19:25:47.73:678,48,0	1/1:3,21:24:51.07:722,51,0	1/1:1,23:24:58.42:809,58,0	1/1:6,26:35:85.34:1133,85,0	1/1:2,23:25:47.58:678,48,0	1/1:2,10:13:31.28:428,31,0
chr10	31275550	.	CT	C	22142.24	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=7.948;DP=817;FS=3.777;HRun=3;HaplotypeScore=84.0197;InbreedingCoeff=1.0000;MQ=84.49;MQ0=0;MQRankSum=-6.232;QD=33.60;ReadPosRankSum=4.181;VQSLOD=5.3945;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,46:46:99:1562,126,0	1/1:1,15:16:42.13:521,42,0	0/0:25,0:25:75.19:0,75,1006	0/0:23,0:23:67.78:0,68,951	1/1:0,27:27:69.15:836,69,0	1/1:0,20:20:57.18:707,57,0	1/1:2,24:26:60.19:744,60,0	1/1:1,28:29:84.21:992,84,0	0/0:25,0:25:75.20:0,75,1023	0/0:29,0:29:87.29:0,87,1236	0/0:14,0:14:42.13:0,42,586	1/1:3,39:42:99:1301,105,0	1/1:1,40:41:99:1374,111,0	1/1:1,36:37:99:1263,102,0	0/0:42,0:42:99:0,120,1690	1/1:0,37:37:99:1227,99,0	1/1:0,17:17:42.13:521,42,0	1/1:0,22:22:66.21:818,66,0	1/1:1,24:25:72.18:853,72,0	1/1:1,31:32:84.26:1041,84,0	1/1:1,41:42:99:1525,123,0	1/1:1,25:26:69.17:838,69,0	1/1:1,21:22:60.19:744,60,0	1/1:2,47:49:99:1673,135,0	1/1:0,20:20:57.18:707,57,0	1/1:0,40:40:99:1447,120,0	1/1:1,27:28:72.23:892,72,0	1/1:0,15:15:45.14:558,45,0
chr10	31276262	.	A	AT	1474.20	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-5.219;DP=548;FS=7.654;HRun=4;HaplotypeScore=62.3900;InbreedingCoeff=0.9422;MQ=78.31;MQ0=0;MQRankSum=-0.971;QD=32.05;ReadPosRankSum=-1.952;VQSLOD=3.2925;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:69.20:0,69,782	0/0:13,0:13:39.11:0,39,442	0/0:15,0:15:14.04:0,14,329	0/0:11,0:11:9.78:0,10,98	0/0:27,0:27:81.23:0,81,919	0/0:22,0:22:60.17:0,60,680	0/0:17,0:17:48.12:0,48,534	0/0:20,0:20:48.12:0,48,536	0/0:21,0:21:63.16:0,63,703	1/1:3,21:24:63.21:857,63,0	1/1:2,20:22:54.18:738,54,0	0/0:21,0:21:57.16:0,57,646	0/0:30,0:30:87.22:0,87,965	0/0:23,0:23:63.18:0,63,714	0/0:16,0:16:45.13:0,45,510	0/0:21,0:21:57.16:0,57,647	0/0:22,0:22:57.16:0,57,647	0/0:28,0:28:84.24:0,84,953	0/0:10,0:10:30.09:0,30,340	0/0:18,0:18:51.04:0,51,561	0/0:19,0:19:54.15:0,54,612	0/0:12,0:12:27.08:0,27,306	0/0:18,0:18:51.12:0,51,563	0/0:12,0:12:33.09:0,33,374	0/0:31,0:31:87.25:0,87,987	0/0:16,1:17:10.09:0,10,503	0/0:22,0:22:54.11:0,54,612	0/0:13,0:13:39.11:0,39,442
chr10	31277112	.	TCA	T	1522.14	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.335;DP=1032;FS=12.995;HRun=0;HaplotypeScore=139.5442;InbreedingCoeff=0.9976;MQ=59.21;MQ0=3;MQRankSum=1.314;QD=31.06;ReadPosRankSum=1.184;VQSLOD=5.1781;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:55:99:0,147,2402	0/0:10,0:10:21.07:0,21,354	0/0:51,1:32:84.18:0,84,1293	0/0:51,0:34:69.13:0,69,1158	0/0:26,0:26:66.21:0,66,1126	0/0:23,0:23:69.22:0,69,1172	0/0:49,0:49:99:0,129,2035	0/0:54,0:54:99:0,144,2102	0/0:39,0:39:99:0,99,1616	1/1:3,26:29:75.21:978,75,0	1/1:1,19:20:51.10:666,51,0	0/0:46,0:46:99:0,120,1970	0/0:39,0:39:99:0,99,1585	0/0:50,0:50:99:0,135,2256	0/0:47,0:47:99:0,120,2068	0/0:30,0:30:75.23:0,75,1260	0/0:40,0:40:99:0,105,1948	0/0:31,0:31:83.16:0,83,1238	0/0:23,0:23:57.17:0,57,896	0/0:18,0:18:48.15:0,48,813	0/0:83,0:83:99:0,194,3370	0/0:16,0:16:36.11:0,36,598	0/0:22,0:22:63.18:0,63,1042	0/0:54,0:54:99:0,144,2447	0/0:22,0:22:60.08:0,60,880	0/0:47,1:48:91.82:0,92,2121	0/0:39,0:38:99:0,108,1701	0/0:13,0:13:30.10:0,30,520
chr10	31278086	.	A	ATT	4094.49	PASS	AB=0.563;AC=46;AF=0.821;AN=56;BaseQRankSum=4.794;DP=571;FS=0.489;HRun=10;HaplotypeScore=98.8260;InbreedingCoeff=0.7359;MQ=75.07;MQ0=1;MQRankSum=-0.344;QD=8.62;ReadPosRankSum=3.259;VQSLOD=0.8246;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,0:33:24.77:154,25,0	1/1:0,0:11:19.71:70,20,0	0/0:28,0:20:18.92:0,19,248	0/0:19,0:13:13.65:0,14,97	1/1:4,0:33:37.44:207,37,0	1/1:1,0:24:54.90:193,55,0	1/1:2,0:11:14.97:53,15,0	1/1:6,0:28:53.01:187,53,0	0/0:19,0:19:54.10:0,54,549	1/1:8,13:22:39.11:562,39,0	1/1:1,21:22:63.08:863,63,0	0/1:3,0:14:10.04:41,0,10	1/1:2,0:18:34.66:122,35,0	1/1:4,0:17:26.20:91,26,0	0/0:30,0:30:78.14:0,78,793	1/1:3,0:13:24.95:88,25,0	1/1:1,0:24:42.36:150,42,0	1/1:3,1:18:2.95:111,3,0	1/1:3,0:23:42.66:158,43,0	1/1:1,0:14:27.81:108,28,0	1/1:0,0:12:27.45:97,27,0	1/1:2,0:14:26.81:101,27,0	0/1:4,0:17:5.05:54,0,5	1/1:3,0:21:42.42:149,42,0	1/1:4,0:25:21.68:131,22,0	1/1:3,1:24:25.64:188,26,0	1/1:1,0:26:49.67:174,50,0	1/1:0,0:9:12.48:44,12,0
chr10	31278802	.	T	TAAG	2253.50	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-5.194;DP=723;FS=1.290;HRun=0;HaplotypeScore=100.7815;InbreedingCoeff=0.9950;MQ=86.54;MQ0=0;MQRankSum=-1.847;QD=51.22;ReadPosRankSum=0.005;VQSLOD=5.2216;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,123,1945	0/0:14,0:14:36.12:0,36,561	0/0:24,0:24:69.19:0,69,1033	0/0:23,0:23:59.49:0,59,833	0/0:22,0:22:60.20:0,60,951	0/0:17,0:17:51.17:0,51,809	0/0:27,0:27:63.21:0,63,991	0/0:28,0:28:78.26:0,78,1216	0/0:25,0:25:72.25:0,72,1142	1/1:5,27:32:87.29:1793,87,0	1/1:2,10:12:30.06:582,30,0	0/0:25,0:25:66.21:0,66,1022	0/0:32,0:32:93.30:0,93,1449	0/0:37,0:37:99:0,105,1620	0/0:34,0:34:93.32:0,93,1464	0/0:36,0:36:99:0,105,1661	0/0:36,0:36:96.33:0,96,1522	0/0:34,0:34:90.31:0,90,1427	0/0:24,0:24:66.19:0,66,1010	0/0:15,0:15:45.15:0,45,702	0/0:33,0:33:90.29:0,90,1396	0/0:18,0:18:45.15:0,45,712	0/0:10,0:10:27.08:0,27,405	0/0:38,0:38:99:0,105,1662	0/0:26,0:26:69.22:0,69,1071	0/0:22,0:22:57.19:0,57,904	0/0:27,0:27:78.27:0,78,1233	0/0:9,0:9:18.05:0,18,259
chr10	31280060	.	TCTC	T	1478.08	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.317;DP=734;FS=11.905;HRun=0;HaplotypeScore=106.3536;InbreedingCoeff=0.9616;MQ=79.06;MQ0=0;MQRankSum=-2.220;QD=33.59;ReadPosRankSum=0.948;VQSLOD=4.0284;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:60,0:60:99:0,157,3365	0/0:9,0:9:27.09:0,27,588	0/0:24,0:24:26.63:0,27,1245	0/0:30,0:30:81.05:0,81,1593	0/0:15,0:15:42.14:0,42,918	0/0:28,0:28:66.23:0,66,1437	0/0:31,0:31:90.30:0,90,1842	0/0:32,0:32:90.27:0,90,1787	0/0:26,0:26:69.22:0,69,1461	1/1:6,24:30:72.15:1065,72,0	1/1:1,13:14:39:535,39,0	0/0:31,0:31:90.30:0,90,1907	0/0:25,0:25:72.23:0,72,1523	0/0:25,0:25:60.16:0,60,1263	0/0:36,0:36:99:0,99,2157	0/0:34,0:34:99:0,102,2097	0/0:36,0:36:93.31:0,93,1980	0/0:23,0:23:63.20:0,63,1333	0/0:18,0:18:36.11:0,36,746	0/0:14,0:14:42.14:0,42,914	0/0:77,0:77:99:0,214,4398	0/0:16,0:16:45.15:0,45,978	0/0:6,0:6:15.04:0,15,287	0/0:33,0:33:93.27:0,93,1880	0/0:21,0:21:60.20:0,60,1262	0/0:23,0:23:63.22:0,63,1364	0/0:14,0:14:33.08:0,33,673	0/0:3,0:3:8.99:0,9,112
chr10	31280250	.	T	TGTGTGTGTGT	8524.85	PASS	AB=0.897;AC=45;AF=0.804;AN=56;BaseQRankSum=4.512;DP=749;FS=7.014;HRun=0;HaplotypeScore=240.4035;InbreedingCoeff=0.7048;MQ=54.70;MQ0=15;MQRankSum=-6.970;QD=16.46;ReadPosRankSum=-3.071;VQSLOD=2.7138;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:38,0:36:12.47:202,12,0	1/1:14,0:14:13.84:299,14,0	0/0:83,0:36:12.03:0,12,369	0/0:83,0:24:4.70:0,5,173	0/1:15,0:16:0:0,0,0	1/1:27,0:27:11.96:391,12,0	1/1:29,0:29:9.24:210,9,0	1/1:24,0:22:18.06:570,18,0	0/0:33,0:33:69.15:0,69,1785	1/1:26,0:25:48.16:1221,48,0	0/1:10,5:18:0.08:0,0,0	1/1:20,0:20:27.08:694,27,0	1/1:22,0:21:13.56:455,14,0	1/1:31,0:31:24.54:555,25,0	0/0:32,0:32:71.45:0,71,1911	1/1:31,0:30:26.90:748,27,0	1/1:21,0:22:30.86:503,31,0	1/1:13,0:13:12:145,12,0	1/1:15,0:15:21.05:497,21,0	0/1:15,0:15:0.07:0,0,1	1/1:26,0:25:5.33:89,5,0	1/1:23,0:22:3.95:61,4,0	1/1:14,0:15:3:25,3,0	1/1:26,0:25:11.73:360,12,0	1/1:24,0:24:8.96:170,9,0	1/1:22,0:21:31.60:736,32,0	1/1:13,0:13:15.01:397,15,0	1/1:8,0:8:15.05:197,15,0
chr10	31280964	.	ACT	A	2061.16	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.610;DP=681;FS=0.520;HRun=0;HaplotypeScore=82.6314;InbreedingCoeff=0.9078;MQ=81.37;MQ0=0;MQRankSum=0.132;QD=34.93;ReadPosRankSum=-0.030;VQSLOD=5.7678;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,126,2205	0/0:9,0:9:21.07:0,21,369	0/0:20,0:20:32.59:0,33,773	0/0:16,0:16:35.96:0,36,454	0/0:17,0:17:48.14:0,48,806	0/0:22,0:22:63.20:0,63,1098	0/0:23,0:23:63.19:0,63,1076	0/0:31,0:31:75.25:0,75,1321	0/0:28,0:28:81.26:0,81,1427	1/1:2,37:39:99:1511,111,0	1/1:0,20:20:48.16:672,48,0	0/0:29,0:29:87.28:0,87,1532	0/0:19,0:19:51.17:0,51,916	0/0:29,0:29:81.24:0,81,1391	0/0:40,0:40:99:0,117,1989	0/0:31,0:31:93.31:0,93,1640	0/0:20,0:20:57.18:0,57,989	0/0:22,0:22:60.21:0,60,1048	0/0:24,0:24:69.21:0,69,1132	0/0:19,0:19:54.10:0,54,919	0/0:42,0:42:99:0,123,2127	0/0:26,0:26:75.24:0,75,1314	0/0:20,0:20:51.14:0,51,842	0/0:24,0:24:72.21:0,72,1202	0/0:17,0:17:51.14:0,51,821	0/0:19,1:20:15.18:0,15,905	0/0:30,0:30:87.23:0,87,1445	0/0:1,0:1:3.01:0,3,54
chr10	31281763	.	GA	G	12675.30	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=2.839;DP=674;FS=13.959;HRun=10;HaplotypeScore=69.9410;InbreedingCoeff=0.9478;MQ=66.00;MQ0=0;MQRankSum=-4.577;QD=21.85;ReadPosRankSum=3.647;VQSLOD=4.6887;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,39:42:99:937,108,0	1/1:1,8:9:20.99:182,21,0	0/0:22,0:22:27.36:0,27,420	0/0:18,0:12:27.07:0,27,291	1/1:4,23:27:41.52:522,42,0	1/1:1,20:21:53.99:469,54,0	1/1:4,16:20:47.98:417,48,0	1/1:10,34:44:95.46:832,95,0	0/0:18,0:18:48.13:0,48,531	1/1:1,22:23:62.98:547,63,0	1/1:2,15:17:38.98:339,39,0	1/1:0,17:17:47.99:417,48,0	1/1:3,18:21:47.98:417,48,0	1/1:4,22:26:65.98:573,66,0	0/0:35,0:35:81.19:0,81,873	1/1:3,26:29:71.97:625,72,0	1/1:2,21:23:53.99:469,54,0	1/1:0,24:24:65.99:573,66,0	1/1:4,23:27:57.24:600,57,0	1/1:3,21:24:50.97:443,51,0	1/1:2,29:31:77.98:677,78,0	1/1:1,21:22:62.98:547,63,0	1/1:2,12:14:2.81:253,3,0	1/1:3,22:25:62.99:547,63,0	1/1:2,32:34:92.98:807,93,0	1/1:0,33:33:92.96:807,93,0	1/1:1,20:21:59.99:520,60,0	1/1:0,6:6:18:156,18,0
chr10	31282719	.	GTT	G	14759.74	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-3.473;DP=744;FS=5.730;HRun=11;HaplotypeScore=100.7450;InbreedingCoeff=0.9897;MQ=68.23;MQ0=6;MQRankSum=-2.409;QD=25.32;ReadPosRankSum=3.698;VQSLOD=4.7961;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,28:30:65.90:682,66,0	1/1:5,13:18:36.06:382,36,0	0/0:32,0:20:19.44:0,19,254	0/0:28,0:16:10.51:0,11,151	1/1:6,48:54:99:1498,141,0	1/1:3,15:18:33.07:351,33,0	1/1:0,16:16:30.08:319,30,0	1/1:3,27:29:81.18:854,81,0	0/0:23,1:26:36.28:0,36,886	0/0:4,0:20:35.75:0,36,132	0/0:10,1:32:34.31:0,34,283	1/1:2,27:29:75.18:794,75,0	1/1:3,29:32:72.17:766,72,0	1/1:5,11:16:30.04:315,30,0	0/0:19,0:21:62.12:0,62,808	1/1:3,19:21:45.09:479,45,0	1/1:3,20:23:41.64:445,42,0	1/1:3,32:35:87.21:926,87,0	1/1:6,18:23:47.80:549,48,0	1/1:3,25:29:62.55:694,63,0	1/1:2,20:22:57.12:607,57,0	1/1:1,26:27:69.15:734,69,0	1/1:0,20:20:54.13:573,54,0	1/1:3,22:26:57.10:662,57,0	1/1:0,29:30:81.16:917,81,0	1/1:7,32:39:87.18:970,87,0	1/1:0,30:30:81.20:862,81,0	1/1:2,11:13:36.08:379,36,0
chr10	31283755	.	TTGTC	T	1754.77	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.524;DP=771;FS=7.822;HRun=0;HaplotypeScore=152.6254;InbreedingCoeff=0.9973;MQ=88.09;MQ0=0;MQRankSum=-4.809;QD=38.15;ReadPosRankSum=-0.309;VQSLOD=3.6104;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,123,3150	0/0:13,0:13:39.13:0,39,1013	0/0:28,0:28:69.02:0,69,1913	0/0:28,0:28:74.95:0,75,1600	0/0:19,0:19:57.20:0,57,1420	0/0:30,0:30:87.30:0,87,2366	0/0:23,0:23:69.24:0,69,1849	0/0:30,0:30:90.30:0,90,2314	0/0:30,0:30:87.30:0,87,2383	1/1:2,28:30:75.26:1429,75,0	1/1:1,15:16:27.01:447,27,0	0/0:38,0:38:99:0,111,2854	0/0:29,0:29:81.26:0,81,2094	0/0:31,0:31:87.28:0,87,2251	0/0:39,0:39:99:0,117,3131	0/0:16,0:16:45.14:0,45,1166	0/0:42,0:42:99:0,123,3267	0/0:24,0:24:72.25:0,72,1963	0/0:16,0:16:45.15:0,45,1199	0/0:26,0:26:72.25:0,72,1972	0/0:52,0:52:99:0,150,3867	0/0:25,0:25:75.26:0,75,2013	0/0:25,0:25:69.24:0,69,1857	0/0:39,0:39:99:0,111,2935	0/0:18,0:18:54.19:0,54,1438	0/0:31,0:31:93.32:0,93,2533	0/0:23,0:23:63.22:0,63,1627	0/0:8,0:8:21.07:0,21,477
chr10	31286337	.	G	GA	953.10	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-5.255;DP=662;FS=3.541;HRun=10;HaplotypeScore=69.6386;InbreedingCoeff=0.9739;MQ=73.24;MQ0=0;MQRankSum=-0.367;QD=21.18;ReadPosRankSum=-1.366;VQSLOD=4.1940;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:68.71:0,69,550	0/0:10,0:10:23.97:0,24,197	0/0:22,0:23:28.70:0,29,295	0/0:14,0:14:10.05:0,10,127	0/0:24,1:25:30.92:0,31,457	0/0:26,2:29:35.95:0,36,491	0/0:14,0:14:38.94:0,39,317	0/0:24,0:25:33.19:0,33,423	0/0:27,0:27:68.89:0,69,561	1/1:4,16:22:53.87:524,54,0	1/1:4,19:23:32.44:550,32,0	0/0:31,1:33:59.17:0,59,671	0/0:19,0:20:55.92:0,56,441	0/0:23,0:24:61.94:0,62,496	0/0:31,0:31:51.96:0,52,630	0/0:28,0:28:74.86:0,75,610	0/0:18,0:18:41.94:0,42,345	0/0:25,0:25:62.23:0,62,492	0/0:19,0:20:52.92:0,53,415	0/0:23,0:23:62.91:0,63,513	0/0:21,0:21:39.01:0,39,398	0/0:24,0:24:53.90:0,54,443	0/0:22,0:25:63.04:0,63,486	0/0:22,0:22:56.91:0,57,465	0/0:36,0:36:82.35:0,82,804	0/0:22,0:22:62.39:0,62,496	0/0:38,1:39:69.85:0,70,776	0/0:9,0:10:29.01:0,29,228
chr10	31290697	.	TC	T	1773.61	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.153;DP=828;FS=2.483;HRun=2;HaplotypeScore=79.5548;InbreedingCoeff=0.9994;MQ=87.44;MQ0=0;MQRankSum=-0.979;QD=33.46;ReadPosRankSum=-1.190;VQSLOD=3.3668;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,163,2428	0/0:13,0:13:39.13:0,39,583	0/0:34,0:34:95.51:0,96,1359	0/0:25,0:26:68.37:0,68,916	0/0:37,0:37:99:0,111,1634	0/0:26,0:26:78.25:0,78,1147	0/0:30,0:30:90.27:0,90,1308	0/0:31,0:31:87.29:0,87,1286	0/0:24,0:24:72.24:0,72,1079	1/1:1,29:30:84.23:1058,84,0	1/1:0,23:23:66.17:838,66,0	0/0:35,0:35:99:0,99,1421	0/0:22,0:22:63.20:0,63,921	0/0:30,0:30:87.08:0,87,1283	0/0:42,0:42:99:0,126,1865	0/0:41,0:41:99:0,123,1822	0/0:31,0:32:93.18:0,93,1361	0/0:21,0:21:63.12:0,63,893	0/0:28,0:28:81.26:0,81,1192	0/0:38,0:38:99:0,114,1666	0/0:34,0:34:99:0,102,1508	0/0:19,0:19:57.19:0,57,853	0/0:19,0:19:54.18:0,54,809	0/0:23,0:23:69.22:0,69,1011	0/0:33,0:33:96.33:0,96,1437	0/0:37,1:38:75.41:0,75,1606	0/0:36,0:36:99:0,108,1616	0/0:9,0:9:27.06:0,27,382
chr10	31291262	.	TG	T	1168.07	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.136;DP=742;FS=3.052;HRun=4;HaplotypeScore=69.2356;InbreedingCoeff=0.9993;MQ=84.45;MQ0=0;MQRankSum=-1.497;QD=29.20;ReadPosRankSum=1.137;VQSLOD=3.8658;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,135,1855	0/0:13,0:13:39.13:0,39,546	0/0:19,0:19:50.94:0,51,666	0/0:27,0:27:78.01:0,78,1028	0/0:17,0:17:51.17:0,51,713	0/0:22,0:22:66.22:0,66,924	0/0:26,0:26:78.24:0,78,1073	0/0:36,0:36:93.29:0,93,1263	0/0:39,0:39:99:0,111,1552	1/1:0,25:25:75.23:898,75,0	1/1:2,13:15:33.10:392,33,0	0/0:40,0:40:99:0,111,1535	0/0:23,0:23:63.21:0,63,879	0/0:29,0:29:81.26:0,81,1116	0/0:32,0:32:96.31:0,96,1323	0/0:27,0:27:78.25:0,78,1075	0/0:37,0:37:99:0,105,1454	0/0:17,0:17:51.17:0,51,714	0/0:24,0:24:60.19:0,60,823	0/0:23,0:23:66.20:0,66,904	0/0:29,0:29:87.29:0,87,1218	0/0:18,0:18:51.17:0,51,710	0/0:21,0:21:60.16:0,60,806	0/0:34,0:34:93.31:0,93,1300	0/0:30,0:30:84.28:0,84,1172	0/0:36,0:36:93.28:0,93,1241	0/0:27,0:26:81.25:0,81,1103	0/0:9,0:9:27.09:0,27,378
chr10	31291627	.	TGTTA	T	651.75	PASS	AB=0.804;AC=3;AF=0.054;AN=56;BaseQRankSum=7.658;DP=824;FS=10.285;HRun=0;HaplotypeScore=150.3607;InbreedingCoeff=-0.0554;MQ=90.08;MQ0=0;MQRankSum=-7.899;QD=8.05;ReadPosRankSum=2.299;VQSLOD=2.4903;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,135,3760	0/0:14,0:14:42.13:0,42,1062	0/0:39,0:39:99:0,111,2643	0/0:26,0:26:72.25:0,72,1976	0/0:21,0:21:63.22:0,63,1773	0/0:25,0:25:75.26:0,75,2121	0/0:40,0:40:99:0,120,3314	0/0:25,0:25:72.25:0,72,1989	0/0:33,0:33:99:0,99,2787	0/1:18,16:34:99:619,0,466	0/1:15,5:20:99:118,0,265	0/0:29,0:29:87.28:0,87,2459	0/0:34,0:34:99:0,102,2904	0/0:35,0:35:99:0,105,2914	0/0:40,0:40:99:0,120,3435	0/0:40,0:40:99:0,120,3449	0/0:46,0:46:99:0,138,3927	0/0:20,0:20:60.21:0,60,1691	0/0:19,0:19:57.20:0,57,1590	0/0:26,0:26:78.27:0,78,2165	0/0:38,0:38:99:0,114,3244	0/0:18,0:18:54.19:0,54,1527	0/0:18,0:18:54.17:0,54,1452	0/0:38,0:38:99:0,114,3154	0/0:25,0:25:75.26:0,75,2168	0/1:25,2:27:11.24:11,0,2002	0/0:41,0:40:99:0,123,3501	0/0:7,0:7:21.07:0,21,596
chr10	31291631	.	ACGAGATAC	A	2354.34	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=11.256;DP=806;FS=11.223;HRun=0;HaplotypeScore=209.7479;InbreedingCoeff=0.9917;MQ=86.82;MQ0=0;MQRankSum=-10.806;QD=44.42;ReadPosRankSum=0.681;VQSLOD=2.2874;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,126,5184	0/0:12,0:12:33.11:0,33,1451	0/0:33,0:33:96.33:0,96,3735	0/0:23,0:23:66.16:0,66,2417	0/0:21,0:21:60.21:0,60,2633	0/0:26,0:26:78.25:0,78,3287	0/0:37,0:37:99:0,108,4452	0/0:23,0:23:66.21:0,66,2536	0/0:33,0:33:93.29:0,93,3819	1/1:20,13:33:91.71:1430,92,0	1/1:5,15:20:40.88:1046,41,0	0/0:29,0:29:87.30:0,87,3678	0/0:37,0:37:99:0,111,4922	0/0:33,0:33:93.29:0,93,3742	0/0:44,0:44:99:0,126,5332	0/0:41,0:41:99:0,120,5070	0/0:45,0:45:99:0,132,5621	0/0:19,0:19:57.20:0,57,2458	0/0:18,0:18:48.16:0,48,1989	0/0:24,0:24:69.21:0,69,2704	0/0:38,0:38:99:0,111,4670	0/0:18,0:18:54.14:0,54,2037	0/0:17,0:17:48.16:0,48,2050	0/0:36,0:36:99:0,108,4790	0/0:25,0:25:75.25:0,75,3191	0/0:29,0:29:47.92:0,48,3252	0/0:40,0:39:99:0,120,5187	0/0:7,0:7:15.05:0,15,670
chr10	31291632	.	CGAG	C	1119.57	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=11.558;DP=810;FS=8.594;HRun=0;HaplotypeScore=129.4280;InbreedingCoeff=0.9369;MQ=86.71;MQ0=0;MQRankSum=-11.570;QD=21.12;ReadPosRankSum=1.064;VQSLOD=3.3824;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,132,3083	0/0:11,0:11:33.11:0,33,810	0/0:33,0:33:96.33:0,96,2245	0/0:23,0:23:66.22:0,66,1502	0/0:21,0:21:60.21:0,60,1475	0/0:26,0:26:78.27:0,78,1914	0/0:37,0:37:99:0,108,2633	0/0:25,0:25:72.25:0,72,1705	0/0:32,0:32:96.32:0,96,2277	1/1:16,16:33:59.69:851,60,0	1/1:15,5:20:47.57:390,48,0	0/0:30,0:30:90.30:0,90,2143	0/0:40,0:40:99:0,120,2838	0/0:34,0:34:99:0,102,2374	0/0:45,0:45:99:0,132,3093	0/0:41,0:41:99:0,123,3003	0/0:45,0:45:99:0,135,3271	0/0:19,0:19:57.20:0,57,1403	0/0:18,0:18:51.17:0,51,1183	0/0:23,0:23:69.24:0,69,1656	0/0:39,0:39:99:0,117,2753	0/0:18,0:18:54.18:0,54,1211	0/0:17,0:17:51.18:0,51,1231	0/0:36,0:36:99:0,108,2644	0/0:25,0:25:75.26:0,75,1843	0/0:26,2:28:5.58:0,6,1760	0/0:40,0:39:99:0,120,2943	0/0:5,0:5:15.05:0,15,369
chr10	31298271	.	G	GGGA	32566.55	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-13.328;DP=681;FS=0.710;HRun=0;HaplotypeScore=87.7500;InbreedingCoeff=0.9983;MQ=85.03;MQ0=0;MQRankSum=-9.492;QD=61.10;ReadPosRankSum=3.247;VQSLOD=6.8991;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,35:36:96.33:2265,96,0	1/1:1,11:12:33.11:780,33,0	0/0:27,0:27:78.22:0,78,1289	0/0:22,0:22:63.15:0,63,1042	1/1:3,26:30:75.26:1753,75,0	1/1:3,27:30:81.28:1845,81,0	1/1:3,24:31:81.28:1875,81,0	1/1:7,30:41:99:2636,120,0	0/0:21,0:21:63.22:0,63,1112	0/0:32,0:32:96.33:0,96,1694	0/0:26,0:26:78.27:0,78,1366	1/1:4,21:25:66.23:1554,66,0	1/1:0,22:24:63.22:1474,63,0	1/1:1,13:14:36.12:851,36,0	0/0:20,0:20:60.21:0,60,1058	1/1:1,17:19:51.18:1189,51,0	1/1:4,37:41:99:2538,111,0	1/1:1,22:23:57.20:1330,57,0	1/1:4,14:19:48.15:1086,48,0	1/1:0,24:26:69.24:1564,69,0	1/1:1,16:17:45.15:1043,45,0	1/1:1,16:17:48.16:1125,48,0	1/1:0,23:23:60.21:1413,60,0	1/1:1,27:28:56.70:1348,57,0	1/1:1,24:26:69.24:1594,69,0	1/1:0,24:24:72.25:1679,72,0	1/1:4,17:21:50.96:1202,51,0	1/1:0,5:6:18.06:424,18,0
chr10	31299370	.	A	AAC	2980.06	PASS	AB=0.967;AC=48;AF=0.889;AN=54;BaseQRankSum=-1.218;DP=571;FS=20.204;HRun=0;HaplotypeScore=133.1646;InbreedingCoeff=0.4208;MQ=63.27;MQ0=20;MQRankSum=0.406;QD=5.82;ReadPosRankSum=-0.268;VQSLOD=1.5403;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:34,0:32:14.98:142,15,0	1/1:4,0:7:2.29:8,2,0	1/1:31,0:21:0.47:1,0,0	./.	1/1:24,0:24:4.02:103,4,0	1/1:18,0:17:12:103,12,0	1/1:40,0:41:16.50:189,17,0	1/1:36,0:35:17.89:153,18,0	0/0:15,0:16:11.68:0,12,80	1/1:22,0:21:21.02:223,21,0	1/1:20,0:20:17.88:136,18,0	1/1:17,0:16:6.02:82,6,0	1/1:8,0:8:6:52,6,0	1/1:17,0:17:9.01:97,9,0	0/0:16,0:17:12.04:0,12,54	1/1:18,0:18:25.19:211,25,0	1/1:19,0:17:3.43:19,3,0	1/1:8,4:12:3.01:44,3,0	1/1:13,0:12:9.03:126,9,0	1/1:15,0:14:11.97:147,12,0	0/1:19,0:17:0.47:29,0,0	1/1:19,0:19:20.62:208,21,0	1/1:21,0:21:11.77:123,12,0	1/1:22,1:24:8.94:67,9,0	1/1:19,0:19:23.72:186,24,0	1/1:24,0:26:27.42:351,27,0	0/1:13,1:13:11.06:210,0,11	1/1:14,0:12:9.01:96,9,0
chr10	31299414	.	CGA	C	512.90	PASS	AB=0.985;AC=19;AF=0.365;AN=52;BaseQRankSum=0.855;DP=529;FS=38.953;HRun=0;HaplotypeScore=189.5197;InbreedingCoeff=-0.1447;MQ=37.72;MQ0=37;MQRankSum=4.253;QD=1.62;ReadPosRankSum=3.265;VQSLOD=0.9894;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:21:23.22:26,0,23	1/1:8,0:8:6.38:50,6,0	./.	./.	0/1:29,0:28:1.98:34,0,2	0/0:16,0:14:5.92:0,6,54	0/0:33,1:31:19.04:0,19,166	0/0:30,2:26:31.09:0,31,633	0/0:19,1:20:6.29:0,6,105	0/0:27,0:24:8.65:0,9,493	0/1:26,0:26:7.28:7,0,299	0/0:13,1:14:2.87:0,3,70	0/1:15,0:16:11.21:11,0,55	0/1:21,0:21:16.44:37,0,16	0/0:18,0:18:24.37:0,24,252	0/1:19,0:19:25.07:25,0,51	0/0:15,0:12:5.38:0,5,121	0/0:11,0:9:10.06:0,10,94	0/0:19,0:18:7.94:0,8,290	0/1:18,0:18:21.19:51,0,21	0/1:18,0:13:28.19:28,0,30	0/1:25,0:25:10.66:42,0,11	1/1:16,1:16:6.40:84,6,0	1/1:16,0:16:1.59:7,2,0	0/1:23,0:22:1.34:1,0,72	0/1:25,0:25:99:158,0,203	0/1:19,0:15:56.48:64,0,56	0/1:9,1:6:15.74:37,0,16
chr10	31299417	.	AAGAG	A	1584.98	PASS	AC=38;AF=0.760;AN=50;BaseQRankSum=3.661;DP=513;FS=10.633;HRun=0;HaplotypeScore=194.4371;InbreedingCoeff=0.6596;MQ=38.02;MQ0=36;MQRankSum=-6.684;QD=4.44;ReadPosRankSum=-3.953;VQSLOD=0.7330;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:15,5:18:5.58:40,6,0	1/1:6,2:8:9.46:108,9,0	./.	./.	1/1:25,3:28:3.20:22,3,0	1/1:12,2:14:3.30:22,3,0	1/1:22,11:31:19.41:123,19,0	./.	0/0:14,0:21:15.51:0,16,189	0/0:29,0:26:24.51:0,25,283	0/0:24,1:25:28.18:0,28,310	1/1:8,5:14:5.57:25,6,0	1/1:11,5:16:11.90:132,12,0	1/1:10,9:20:14.73:126,15,0	0/0:20,0:21:29.89:0,30,539	1/1:12,4:17:8.94:87,9,0	1/1:13,2:11:3.90:49,4,0	0/0:10,0:8:2.97:0,3,23	1/1:13,0:16:12.01:112,12,0	0/0:13,0:18:1.11:0,1,8	1/1:14,0:13:0.89:2,1,0	1/1:16,6:24:10.59:65,11,0	1/1:11,6:15:12.28:96,12,0	1/1:12,2:13:2.97:20,3,0	1/1:12,10:22:26.59:174,27,0	1/1:19,5:24:15.05:232,15,0	1/1:14,0:16:18.49:170,18,0	1/1:7,3:6:9.03:140,9,0
chr10	31299459	.	G	GAGACAT	10381.47	PASS	AB=1.000;AC=48;AF=0.857;AN=56;BaseQRankSum=-5.769;DP=469;FS=13.620;HRun=0;HaplotypeScore=149.0530;InbreedingCoeff=0.3239;MQ=60.24;MQ0=19;MQRankSum=-0.882;QD=24.31;ReadPosRankSum=-0.500;VQSLOD=3.9411;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:20:29.48:404,29,0	1/1:3,0:3:0.57:38,1,0	0/0:20,0:10:26.29:0,26,430	0/0:22,0:14:5.27:0,5,337	1/1:11,0:12:26.15:366,26,0	1/1:15,0:15:30.41:461,30,0	1/1:32,0:30:68.22:988,68,0	1/1:27,0:27:64.76:1073,65,0	0/1:16,0:16:51.16:51,0,328	0/1:20,0:19:31.37:536,0,31	0/1:20,0:20:50.53:335,0,51	1/1:19,0:18:41.34:584,41,0	1/1:15,0:14:19.58:303,20,0	1/1:15,0:15:18.31:294,18,0	0/1:21,0:21:1.56:2,0,529	1/1:17,0:17:34.72:557,35,0	1/1:19,0:17:12.89:470,13,0	1/1:3,5:9:0.93:38,1,0	1/1:15,0:15:21.13:354,21,0	1/1:15,0:15:42.06:616,42,0	1/1:17,0:14:24.04:305,24,0	1/1:12,0:12:27.07:341,27,0	1/1:13,0:11:19.40:246,19,0	1/1:12,0:11:18.06:277,18,0	1/1:20,0:20:54.17:755,54,0	1/1:14,0:14:5.51:401,6,0	1/1:17,0:14:8.26:415,8,0	1/1:10,0:10:4.02:172,4,0
chr10	31299649	.	GTTTT	G	11365.48	PASS	AB=0.784;AC=48;AF=0.857;AN=56;BaseQRankSum=-0.640;DP=550;FS=5.700;HRun=15;HaplotypeScore=106.3691;InbreedingCoeff=0.6464;MQ=64.14;MQ0=3;MQRankSum=-1.094;QD=22.78;ReadPosRankSum=6.381;VQSLOD=3.7934;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,18:21:51.07:694,51,0	1/1:1,8:9:21.02:286,21,0	0/1:18,0:9:2.07:2,0,319	0/0:13,0:8:2.28:0,2,82	1/1:2,21:25:33.79:495,34,0	1/1:4,19:26:55.28:698,55,0	1/1:3,20:25:54.06:701,54,0	1/1:9,14:25:29.33:522,29,0	0/0:7,0:16:35.96:0,36,455	0/1:6,3:25:60.40:120,0,60	1/1:3,1:14:12.95:66,13,0	1/1:6,10:18:28.12:353,28,0	1/1:1,28:30:78:1045,78,0	1/1:1,11:14:33:432,33,0	0/0:11,0:21:34.14:0,34,444	1/1:5,15:21:48.01:637,48,0	1/1:2,14:16:33.07:450,33,0	1/1:5,12:17:1.18:301,1,0	1/1:15,9:24:31.15:440,31,0	1/1:6,13:20:33.78:451,34,0	1/1:4,5:11:13:168,13,0	1/1:2,12:14:17.87:244,18,0	1/1:3,18:21:48.07:654,48,0	1/1:6,8:14:17.51:244,18,0	1/1:3,9:12:20.99:286,21,0	1/1:2,22:25:64.42:844,64,0	1/1:4,22:29:54.03:684,54,0	1/1:4,19:25:34.73:545,35,0
chr10	31301060	.	GTATATA	G	7191.10	PASS	AB=0.629;AC=40;AF=0.741;AN=54;BaseQRankSum=-1.139;DP=316;FS=14.856;HRun=0;HaplotypeScore=79.2914;InbreedingCoeff=0.6113;MQ=58.00;MQ0=1;MQRankSum=-5.654;QD=28.31;ReadPosRankSum=1.323;VQSLOD=3.5002;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,14:19:15.05:314,15,0	1/1:2,1:4:3.48:60,3,0	0/0:9,0:3:0.47:0,0,1	0/0:18,0:11:10.54:0,11,90	0/1:6,8:15:2.51:260,0,3	1/1:1,15:16:36.12:742,36,0	1/1:2,0:2:5.23:55,5,0	1/1:11,21:32:53.73:1017,54,0	0/0:5,0:6:18.06:0,18,479	0/0:9,0:9:18.06:0,18,447	0/0:5,0:5:6.02:0,6,159	1/1:3,4:7:9.03:193,9,0	1/1:4,9:13:17.80:386,18,0	1/1:3,4:8:9.03:171,9,0	0/0:9,0:9:15.05:0,15,423	1/1:0,6:6:12.04:257,12,0	1/1:6,12:18:27.09:519,27,0	1/1:8,11:20:18.06:363,18,0	1/1:8,8:15:24.08:498,24,0	1/1:2,9:11:14.84:191,15,0	./.	1/1:0,4:4:9.03:173,9,0	1/1:1,1:2:3.01:64,3,0	1/1:1,2:3:3.01:64,3,0	1/1:7,15:22:30.10:600,30,0	0/1:8,11:19:49.48:577,0,49	1/1:2,7:9:21.07:392,21,0	1/1:1,7:8:15.05:294,15,0
chr10	31301869	.	GA	G	4952.67	PASS	AB=0.933;AC=52;AF=0.929;AN=56;BaseQRankSum=1.019;DP=470;FS=6.028;HRun=2;HaplotypeScore=182.6618;InbreedingCoeff=-0.0794;MQ=63.53;MQ0=2;MQRankSum=-4.193;QD=10.54;ReadPosRankSum=6.374;VQSLOD=3.0859;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:22:39:211,39,0	1/1:6,0:6:17.70:116,18,0	0/1:19,1:19:30.37:30,0,216	0/1:10,4:11:27.90:73,0,28	1/1:23,0:23:39.16:205,39,0	1/1:15,0:15:34.01:173,34,0	1/1:21,0:21:39.56:250,40,0	0/1:19,0:19:14.76:80,0,15	1/1:26,1:27:63.71:367,64,0	1/1:22,0:22:37.73:235,38,0	1/1:11,1:11:30.93:153,31,0	1/1:16,0:15:31.53:176,32,0	1/1:14,0:14:20.01:188,20,0	1/1:22,0:22:56.84:311,57,0	1/1:21,0:20:30.88:208,31,0	1/1:22,0:22:46.08:256,46,0	1/1:15,0:15:18.74:179,19,0	1/1:4,0:4:8.36:39,8,0	1/1:8,0:8:20.78:85,21,0	1/1:11,0:11:28.01:149,28,0	1/1:9,1:10:16.66:83,17,0	1/1:21,0:21:46.80:243,47,0	0/1:19,0:19:14.15:115,0,14	1/1:18,0:18:43.48:256,43,0	1/1:19,0:19:44.96:226,45,0	1/1:21,0:21:50.70:225,51,0	1/1:20,0:20:33.76:234,34,0	1/1:8,0:8:19.18:90,19,0
chr10	31301918	.	GT	G	5637.90	PASS	AB=0.773;AC=51;AF=0.944;AN=54;BaseQRankSum=1.604;DP=379;FS=16.528;HRun=1;HaplotypeScore=180.8878;InbreedingCoeff=0.0492;MQ=78.13;MQ0=18;MQRankSum=-3.491;QD=15.20;ReadPosRankSum=2.995;VQSLOD=3.4002;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,7:8:9:105,9,0	1/1:1,7:8:15.03:174,15,0	0/1:43,7:23:99:234,0,179	0/1:64,5:24:99:158,0,170	1/1:0,13:13:2.54:28,3,0	1/1:0,6:6:9.03:117,9,0	1/1:1,7:8:24.06:292,24,0	1/1:0,6:6:15.05:198,15,0	1/1:0,24:24:54.08:666,54,0	1/1:0,8:8:24.08:325,24,0	1/1:0,7:7:5.95:62,6,0	1/1:0,6:6:11.93:121,12,0	1/1:0,12:12:24.07:298,24,0	1/1:0,10:10:20.93:220,21,0	1/1:0,16:15:24.02:287,24,0	1/1:0,11:11:24.07:295,24,0	1/1:0,8:8:18.05:218,18,0	1/1:0,1:1:3.01:40,3,0	1/1:0,5:5:12.04:164,12,0	1/1:0,12:12:17.99:199,18,0	1/1:0,2:2:3.01:42,3,0	1/1:0,17:17:12:149,12,0	0/1:0,11:11:0:0,0,0	./.	1/1:0,10:10:9.02:120,9,0	1/1:0,22:22:60.18:719,60,0	1/1:0,11:11:21.06:258,21,0	1/1:0,4:4:12.04:149,12,0
chr10	31301923	.	GT	G	3868.05	PASS	AB=0.673;AC=47;AF=0.904;AN=52;BaseQRankSum=3.813;DP=392;FS=17.368;HRun=1;HaplotypeScore=180.3348;InbreedingCoeff=0.1677;MQ=77.54;MQ0=20;MQRankSum=-3.467;QD=10.29;ReadPosRankSum=2.927;VQSLOD=0.2792;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:0,7:7:0:0,0,0	1/1:0,7:7:14.69:128,15,0	0/1:65,5:24:99:149,0,371	0/1:77,5:25:99:123,0,258	1/1:0,12:12:2.69:29,3,0	1/1:0,6:6:3.01:34,3,0	1/1:0,4:4:11.82:121,12,0	1/1:0,5:5:12.04:156,12,0	1/1:0,23:23:35.22:327,35,0	1/1:0,8:8:24.08:323,24,0	0/1:0,7:7:0:0,0,0	1/1:0,6:6:11.77:116,12,0	1/1:0,11:11:21.06:245,21,0	1/1:0,10:10:17.86:169,18,0	1/1:0,17:16:17.17:127,17,0	1/1:0,10:10:21.06:247,21,0	1/1:0,7:7:12.03:134,12,0	1/1:0,1:1:3.01:40,3,0	1/1:1,4:5:5.55:117,6,0	1/1:0,11:11:14.78:157,15,0	0/1:0,2:2:0:0,0,0	1/1:0,16:16:8.59:64,9,0	./.	./.	1/1:0,10:10:2.88:15,3,0	1/1:0,22:22:60.16:695,60,0	1/1:0,10:10:21.06:250,21,0	1/1:0,3:3:9.02:102,9,0
chr10	31301932	.	AT	A	2742.39	PASS	AB=0.982;AC=37;AF=0.881;AN=42;BaseQRankSum=5.732;DP=421;FS=20.721;HRun=1;HaplotypeScore=169.6561;InbreedingCoeff=0.3365;MQ=69.43;MQ0=34;MQRankSum=-3.325;QD=9.97;ReadPosRankSum=4.834;VQSLOD=0.0470;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	1/1:0,5:5:6.02:72,6,0	0/0:88,0:20:43.06:0,43,588	0/1:107,2:26:43.85:44,0,476	0/0:0,9:9:0.47:0,0,1	./.	1/1:0,3:3:6.02:81,6,0	1/1:0,3:3:6.02:83,6,0	1/1:0,23:23:14.99:181,15,0	1/1:0,8:8:24.08:321,24,0	./.	1/1:0,5:5:8.51:81,9,0	1/1:0,10:10:18.02:209,18,0	1/1:0,9:9:18.49:202,18,0	1/1:1,23:23:6.02:82,6,0	1/1:0,10:10:21.03:237,21,0	1/1:1,5:5:6.01:69,6,0	1/1:0,1:1:3.01:42,3,0	1/1:0,4:4:9.03:125,9,0	1/1:0,9:9:9.03:121,9,0	./.	1/1:0,16:16:3.01:40,3,0	./.	./.	./.	1/1:0,20:20:54.02:577,54,0	1/1:0,7:7:18.01:198,18,0	1/1:0,3:3:8.99:88,9,0
chr10	31301934	.	CAGAGAG	C	1254.06	PASS	AB=0.900;AC=23;AF=0.639;AN=36;BaseQRankSum=4.091;DP=450;FS=2.823;HRun=0;HaplotypeScore=189.3618;InbreedingCoeff=0.4911;MQ=66.41;MQ0=38;MQRankSum=0.366;QD=11.72;ReadPosRankSum=4.329;VQSLOD=2.9161;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	1/1:5,1:6:3.48:44,3,0	0/0:87,0:19:0.08:0,0,9	0/0:109,0:26:2.87:0,3,75	./.	./.	1/1:3,1:3:6.02:70,6,0	./.	0/0:13,0:24:9:0,9,97	0/1:8,0:9:0.95:1,0,52	./.	1/1:4,2:6:5.95:61,6,0	1/1:6,5:11:6.02:84,6,0	1/1:4,5:9:12.03:147,12,0	0/0:23,0:23:2.70:0,3,67	1/1:6,5:11:11.99:146,12,0	1/1:5,1:6:3.01:42,3,0	0/0:2,0:2:1.55:0,2,4	0/0:6,0:6:5.89:0,6,37	1/1:6,6:11:2.94:18,3,0	./.	./.	./.	./.	./.	1/1:11,10:21:28.65:496,29,0	1/1:4,4:7:12.04:167,12,0	1/1:1,2:3:8.98:103,9,0
chr10	31301978	.	CAG	C	406.68	PASS	AB=0.876;AC=13;AF=0.310;AN=42;BaseQRankSum=1.744;DP=628;FS=14.326;HRun=0;HaplotypeScore=166.6126;InbreedingCoeff=-0.0089;MQ=25.86;MQ0=53;MQRankSum=-1.842;QD=1.81;ReadPosRankSum=0.180;VQSLOD=1.5236;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	1/1:6,0:7:3.48:14,3,0	./.	./.	./.	0/0:30,3:32:8.99:0,9,112	0/1:18,2:14:26.17:26,0,79	0/1:41,5:17:99:140,0,395	0/0:28,0:26:32.76:0,33,494	0/1:22,6:21:99:193,0,140	./.	0/0:24,2:26:2.79:0,3,91	0/1:15,0:16:7.81:8,0,122	0/0:19,0:22:5.95:0,6,68	0/0:26,0:24:21.07:0,21,348	0/0:22,0:20:8.86:0,9,135	1/1:13,2:12:3.48:39,3,0	0/1:8,2:5:26.63:27,0,32	0/1:14,1:11:22.20:22,0,162	1/1:27,1:29:0.31:1,0,0	0/0:19,4:16:6.02:0,6,87	0/0:22,1:23:0:0,0,0	0/0:18,0:16:0.47:0,0,1	./.	./.	0/1:24,3:24:58.79:59,0,484	0/0:24,0:23:23.54:0,24,389	0/0:14,0:16:14.92:0,15,192
chr10	31302004	.	CAG	C	1142.44	PASS	AB=0.816;AC=22;AF=0.550;AN=40;BaseQRankSum=2.792;DP=670;FS=2.665;HRun=0;HaplotypeScore=128.6165;InbreedingCoeff=-0.0132;MQ=26.32;MQ0=53;MQRankSum=-3.357;QD=2.94;ReadPosRankSum=-3.117;VQSLOD=2.0747;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	1/1:7,7:13:9.75:89,10,0	./.	./.	./.	1/1:29,8:37:8.16:103,8,0	0/1:18,4:16:40.39:62,0,40	0/1:27,2:18:16.13:87,0,16	0/0:30,0:27:39.03:0,39,601	0/1:41,0:30:99:130,0,150	./.	0/1:14,11:25:40.42:56,0,40	1/1:15,4:17:6.37:108,6,0	1/1:14,4:22:2.56:14,3,0	0/0:21,0:17:30.10:0,30,491	1/1:15,15:30:2.72:19,3,0	0/0:17,5:16:0.47:0,0,1	1/1:9,1:5:3.48:39,3,0	0/1:9,1:7:8.92:74,0,9	1/1:20,13:30:0.31:1,0,0	0/0:29,0:17:6.02:0,6,99	0/0:11,11:22:0:0,0,0	./.	./.	./.	0/1:19,8:25:9:309,0,9	0/1:19,7:24:58.24:173,0,58	0/1:17,5:19:3.12:3,0,37
chr10	31302006	.	G	GAC	765.34	PASS	AB=0.936;AC=9;AF=0.188;AN=48;BaseQRankSum=1.179;DP=692;FS=0.000;HRun=0;HaplotypeScore=133.2465;InbreedingCoeff=0.0830;MQ=26.23;MQ0=53;MQRankSum=-2.714;QD=2.85;ReadPosRankSum=-3.163;VQSLOD=1.5182;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/1:17,0:16:9.50:17,0,9	./.	./.	0/1:36,0:31:0:0,0,0	0/0:42,0:38:9.30:0,9,54	0/0:26,0:18:11.80:0,12,99	0/0:37,0:16:21.56:0,22,192	0/0:29,0:26:38.56:0,39,592	0/1:28,15:32:99:771,0,247	0/1:23,15:35:0:0,0,0	0/0:27,0:25:11.82:0,12,101	0/0:19,0:17:2.55:0,3,79	0/0:24,0:23:2.31:0,2,14	0/0:21,0:17:30.57:0,31,460	0/1:35,0:32:10.10:10,0,52	0/0:23,0:17:4.18:0,4,22	0/0:12,0:6:5.86:0,6,35	0/1:11,0:8:8.84:9,0,69	0/1:35,0:32:0.10:0,0,0	0/0:29,0:17:6.02:0,6,92	0/0:23,0:22:0:0,0,0	0/1:25,0:21:0:0,0,0	0/0:18,0:11:0:0,0,0	./.	0/1:28,1:26:59.51:60,0,276	0/0:27,0:24:10.37:0,10,192	0/0:23,0:20:7.40:0,7,155
chr10	31302016	.	GAGAC	G	298.38	PASS	AB=0.992;AC=16;AF=0.348;AN=46;BaseQRankSum=2.780;DP=717;FS=20.809;HRun=0;HaplotypeScore=133.8373;InbreedingCoeff=-0.2136;MQ=25.99;MQ0=57;MQRankSum=-1.275;QD=0.75;ReadPosRankSum=-1.499;VQSLOD=1.2282;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/1:19,0:17:22.31:22,0,30	./.	./.	0/0:32,1:28:0:0,0,0	0/0:42,2:39:2.20:0,2,16	0/0:27,0:20:10.39:0,10,118	0/1:38,0:15:86.40:95,0,86	0/0:26,0:23:43.57:0,44,994	0/0:41,0:29:9.77:0,10,686	0/1:45,0:40:0:0,0,0	0/1:29,0:26:9.15:9,0,97	0/1:23,0:19:13.74:14,0,53	0/1:28,0:25:8.31:29,0,8	0/0:20,0:16:30.08:0,30,718	0/0:35,0:33:5.29:0,5,52	0/1:24,0:17:6.75:16,0,7	0/1:11,1:6:14.66:15,0,16	0/1:15,0:12:39.31:39,0,73	1/1:40,0:37:1.24:3,1,0	0/0:27,1:16:6.02:0,6,161	./.	0/1:25,0:22:0:0,0,0	0/1:19,0:11:0:0,0,0	./.	0/1:28,0:25:99:124,0,193	0/1:27,0:24:19.94:20,0,190	0/1:25,0:22:33.35:33,0,81
chr10	31302018	.	GAC	G	1203.80	PASS	AB=0.861;AC=19;AF=0.432;AN=44;BaseQRankSum=2.370;DP=701;FS=6.602;HRun=0;HaplotypeScore=117.9224;InbreedingCoeff=-0.1327;MQ=25.89;MQ0=58;MQRankSum=-2.308;QD=2.77;ReadPosRankSum=-0.920;VQSLOD=1.8698;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/1:15,4:17:9.25:109,0,9	./.	./.	./.	1/1:37,7:38:8.06:52,8,0	0/1:24,2:19:23.84:24,0,82	0/0:39,0:16:4.11:0,4,159	0/0:26,0:23:43.51:0,44,718	0/1:39,3:30:99:171,0,303	0/1:42,3:40:0:0,0,0	0/1:22,6:25:59.06:59,0,59	0/1:15,7:18:6.93:135,0,7	0/0:21,6:24:2.80:0,3,14	0/0:18,0:14:30.08:0,30,538	0/0:30,5:32:2.35:0,2,16	0/1:19,4:16:7:15,0,7	1/1:11,1:6:8.83:56,9,0	0/1:9,6:12:59.12:135,0,59	1/1:31,5:33:0.78:2,1,0	0/0:24,3:15:6.02:0,6,115	./.	0/1:23,3:22:0:0,0,0	0/1:17,1:10:0:0,0,0	./.	0/1:23,5:25:56.16:358,0,56	0/1:22,4:23:65.50:127,0,66	0/1:21,4:22:43.98:85,0,44
chr10	31302052	.	GAC	G	363.71	PASS	AB=0.979;AC=19;AF=0.380;AN=50;BaseQRankSum=1.570;DP=662;FS=52.001;HRun=0;HaplotypeScore=116.1993;InbreedingCoeff=-0.0198;MQ=27.35;MQ0=47;MQRankSum=-0.088;QD=0.84;ReadPosRankSum=-2.807;VQSLOD=-0.5978;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	0/0:17,0:15:11.08:0,11,76	./.	./.	1/1:30,0:26:2.74:12,3,0	0/1:35,0:31:0.20:0,0,1	0/0:23,0:17:2.13:0,2,16	0/0:50,0:30:22.65:0,23,358	0/0:18,0:16:3.47:0,3,412	0/1:27,5:27:99:197,0,133	0/1:36,7:39:0:0,0,0	0/1:19,0:17:8.18:8,0,33	0/1:27,0:24:24.32:24,0,54	0/1:27,0:24:8.16:13,0,8	0/0:20,0:16:9.22:0,9,267	0/1:35,0:33:12.09:12,0,31	0/0:17,0:13:7.05:0,7,35	0/0:9,0:7:8.12:0,8,46	0/0:25,0:19:10.09:0,10,228	0/0:28,0:25:3.63:0,4,14	1/1:23,0:15:5.99:50,6,0	1/1:21,0:20:8.86:64,9,0	0/1:19,0:18:16.86:17,0,38	0/1:17,0:11:0:0,0,0	0/1:21,0:19:0:0,0,0	0/1:30,0:29:30.28:30,0,338	0/1:27,0:23:42.28:42,0,84	0/1:27,0:25:29:29,0,117
chr10	31302054	.	CAGAGAGAG	C	361.65	PASS	AB=0.994;AC=19;AF=0.396;AN=48;BaseQRankSum=0.433;DP=654;FS=4.040;HRun=0;HaplotypeScore=140.0169;InbreedingCoeff=0.0367;MQ=27.51;MQ0=47;MQRankSum=-1.433;QD=1.08;ReadPosRankSum=1.136;VQSLOD=2.0269;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/1:16,0:14:0.86:30,0,1	./.	./.	0/0:31,0:27:3.01:0,3,36	0/0:33,0:29:0.86:0,1,15	1/1:24,1:19:3.35:56,3,0	0/1:51,0:31:88.58:89,0,119	0/0:18,0:16:33.02:0,33,620	0/0:29,0:25:7.98:0,8,208	./.	0/1:18,1:17:24.40:42,0,24	0/1:27,0:24:5.66:25,0,6	1/1:26,1:24:4.99:71,5,0	0/0:20,0:16:14.08:0,14,287	0/0:36,1:35:8.80:0,9,54	0/1:19,0:15:13.78:14,0,38	0/1:11,0:8:5.78:6,0,20	0/0:23,0:18:10.18:0,10,66	1/1:27,0:24:2.90:61,3,0	0/0:21,0:14:3:0,3,25	1/1:17,1:17:1.97:23,2,0	0/1:18,0:17:5.11:28,0,5	0/0:16,0:11:0:0,0,0	1/1:19,1:18:2.04:6,2,0	0/1:31,0:29:35.86:36,0,275	0/0:27,0:23:9.19:0,9,81	0/1:27,0:25:11.90:12,0,14
chr10	31302060	.	G	GAGAC	113.52	PASS	AB=1.000;AC=14;AF=0.269;AN=52;BaseQRankSum=1.828;DP=615;FS=1.719;HRun=0;HaplotypeScore=127.2656;InbreedingCoeff=-0.1287;MQ=28.02;MQ0=51;MQRankSum=-1.218;QD=0.43;ReadPosRankSum=0.292;VQSLOD=2.5147;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	0/1:14,0:13:12.43:19,0,12	./.	0/1:2,0:1:0:0,0,0	0/0:27,0:23:5.88:0,6,55	0/0:36,0:32:5.17:0,5,31	1/1:24,0:18:2.11:18,2,0	0/0:51,0:31:25.93:0,26,395	0/0:19,0:17:32.92:0,33,457	0/1:29,0:24:61.25:61,0,257	0/0:28,10:35:0:0,0,0	0/1:18,0:17:10.95:11,0,27	0/1:28,0:25:7.58:8,0,34	0/1:24,0:21:17.23:27,0,17	0/0:19,0:15:14.08:0,14,233	0/1:34,0:33:7.40:7,0,44	0/0:17,0:14:5.89:0,6,53	0/1:11,0:8:6.69:7,0,51	0/0:15,0:11:4.47:0,4,109	0/1:21,0:19:18.06:39,0,18	0/0:22,0:14:3:0,3,25	0/1:17,0:16:5.82:6,0,7	0/0:14,0:13:4.59:0,5,15	0/1:18,0:13:0.03:0,0,0	0/0:18,0:16:5.49:0,5,34	0/0:27,0:25:2.42:0,2,306	0/1:26,0:22:21.55:35,0,22	0/0:26,0:24:7.81:0,8,131
chr10	31302062	.	G	GAC	404.39	PASS	AB=0.860;AC=19;AF=0.365;AN=52;BaseQRankSum=1.141;DP=597;FS=10.052;HRun=0;HaplotypeScore=115.4350;InbreedingCoeff=-0.1466;MQ=28.18;MQ0=44;MQRankSum=-2.073;QD=1.23;ReadPosRankSum=1.482;VQSLOD=1.6762;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	0/1:6,7:13:25.77:48,0,26	./.	0/1:4,0:1:0:0,0,0	0/0:20,5:22:5.60:0,6,45	0/0:29,5:31:3.93:0,4,21	1/1:24,0:19:1.29:4,1,0	0/0:47,0:30:13.07:0,13,402	0/0:18,0:16:33:0,33,385	0/1:27,0:22:29.81:30,0,155	0/0:38,0:34:0:0,0,0	0/0:17,2:18:6.73:0,7,37	0/1:22,5:25:35.11:59,0,35	1/1:20,3:20:4.80:20,5,0	0/0:18,0:15:15.03:0,15,207	0/1:22,11:33:33.80:45,0,34	0/1:15,2:15:10.83:11,0,71	0/1:8,1:7:38:38,0,45	0/0:13,0:9:4.52:0,5,110	0/1:13,6:18:16.04:23,0,16	0/0:19,1:13:3:0,3,25	1/1:11,4:16:2.23:27,2,0	0/1:12,2:13:2.27:2,0,20	0/1:18,0:13:0.14:0,0,0	0/0:13,4:15:5.55:0,6,28	0/1:25,2:25:99:105,0,290	0/1:21,5:22:44.39:97,0,44	0/1:21,3:24:27.88:28,0,125
chr10	31302072	.	GAC	G	2090.15	PASS	AB=1.000;AC=45;AF=0.833;AN=54;BaseQRankSum=1.401;DP=562;FS=0.000;HRun=0;HaplotypeScore=106.4521;InbreedingCoeff=0.2806;MQ=33.55;MQ0=37;MQRankSum=-1.695;QD=4.18;ReadPosRankSum=-2.163;VQSLOD=2.1876;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:19,0:15:0:0,0,0	1/1:13,0:12:5.98:46,6,0	1/1:9,0:2:1.05:2,1,0	0/1:20,0:9:8.30:8,0,11	1/1:23,0:21:17.70:130,18,0	1/1:37,0:35:18.51:112,19,0	1/1:19,1:16:6.42:45,6,0	1/1:14,17:19:50.38:358,50,0	0/0:16,0:15:6.03:0,6,241	1/1:23,0:20:36.23:209,36,0	./.	1/1:19,0:17:4.80:34,5,0	1/1:27,0:24:16.84:102,17,0	1/1:22,0:19:8.52:60,9,0	0/0:16,0:14:16.67:0,17,254	0/1:32,0:31:8.94:9,0,22	0/1:17,0:15:38.52:41,0,39	1/1:11,0:8:14.33:100,14,0	1/1:10,0:7:13.69:85,14,0	1/1:16,0:15:15.91:112,16,0	1/1:19,0:11:5.99:50,6,0	1/1:15,0:14:8.86:63,9,0	1/1:8,2:9:3.87:25,4,0	1/1:20,0:16:5.56:49,6,0	1/1:16,0:14:5.99:49,6,0	0/1:24,0:22:64.50:144,0,65	1/1:25,0:22:7.13:122,7,0	1/1:22,0:22:32.80:274,33,0
chr10	31302492	.	G	GGA	21516.20	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-16.965;DP=708;FS=14.514;HRun=0;HaplotypeScore=90.2685;InbreedingCoeff=0.9942;MQ=74.35;MQ0=1;MQRankSum=-3.046;QD=40.75;ReadPosRankSum=6.877;VQSLOD=5.8079;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,63:67:99:2713,164,0	1/1:0,13:14:39.09:629,39,0	0/0:16,0:15:24.20:0,24,369	0/0:21,0:21:29.59:0,30,491	1/1:1,21:22:56.98:949,57,0	1/1:1,29:29:72.24:1215,72,0	1/1:1,36:37:84.28:1421,84,0	1/1:2,23:25:60.10:855,60,0	0/0:12,0:12:35.98:0,36,339	1/1:1,16:17:48.14:785,48,0	1/1:0,14:14:36.05:572,36,0	1/1:2,33:35:87.29:1456,87,0	1/1:1,28:30:72.23:1214,72,0	1/1:0,33:34:90.31:1517,90,0	0/0:15,0:15:45.08:0,45,536	1/1:0,28:28:72.25:1214,72,0	1/1:0,42:44:99:1823,108,0	1/1:1,20:21:51.16:859,51,0	0/0:27,0:27:78.22:0,78,1073	0/0:13,0:13:33.08:0,33,445	0/0:49,0:49:99:0,140,1964	1/1:2,20:22:48.14:806,48,0	1/1:1,10:11:27.08:441,27,0	1/1:1,30:31:66.23:1113,66,0	1/1:0,22:21:54.18:910,54,0	1/1:1,16:20:54.13:823,54,0	0/0:27,0:27:81.21:0,81,1128	1/1:0,4:4:12.04:203,12,0
chr10	31303395	.	A	AGT	3102.93	PASS	AB=0.908;AC=34;AF=0.654;AN=52;BaseQRankSum=-2.988;DP=729;FS=4.082;HRun=0;HaplotypeScore=125.7123;InbreedingCoeff=-0.2893;MQ=59.40;MQ0=17;MQRankSum=0.179;QD=4.79;ReadPosRankSum=-0.750;VQSLOD=2.9188;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:46,0:46:30.02:200,0,30	1/1:8,0:8:3.94:67,4,0	./.	./.	0/1:15,1:16:10.51:77,0,11	0/1:15,7:23:5.71:120,0,6	0/1:33,2:35:14.74:297,0,15	1/1:36,0:35:22.36:116,22,0	0/1:16,0:21:0.95:1,0,31	0/1:22,0:28:10.11:10,0,46	1/1:12,0:14:2.68:11,3,0	0/1:26,3:29:11.57:248,0,12	1/1:19,0:19:0.08:175,0,0	0/1:39,2:41:10.58:256,0,11	0/0:10,0:23:24.99:0,25,160	1/1:19,0:19:15.46:142,15,0	0/1:26,6:32:17.41:367,0,17	0/1:20,6:28:11.50:159,0,11	1/1:25,0:25:10.21:87,10,0	1/1:24,0:23:9.01:132,9,0	0/1:34,10:44:34.56:77,0,35	1/1:12,5:18:6.02:88,6,0	0/1:11,0:11:12.24:24,0,12	0/1:19,5:25:25.26:283,0,25	1/1:32,0:33:9.91:115,10,0	0/1:35,1:35:10.11:146,0,10	0/1:18,3:21:44.85:50,0,45	0/1:7,0:7:0:0,0,0
chr10	31303437	.	TGC	T	4935.54	PASS	AB=0.946;AC=35;AF=0.625;AN=56;BaseQRankSum=-3.000;DP=612;FS=1.833;HRun=0;HaplotypeScore=103.9161;InbreedingCoeff=0.1339;MQ=62.80;MQ0=9;MQRankSum=0.470;QD=9.93;ReadPosRankSum=-4.534;VQSLOD=3.6321;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:36,1:37:35.30:232,0,35	1/1:9,0:9:8.83:100,9,0	0/0:20,0:16:19.09:0,19,224	0/0:27,0:23:46.36:0,46,369	1/1:12,2:14:9.75:186,10,0	0/1:19,0:18:7.40:60,0,7	0/1:30,2:32:3.80:497,0,4	1/1:27,0:26:52.68:373,53,0	0/0:16,0:14:4.37:0,4,118	1/1:18,0:18:24.84:286,25,0	1/1:10,0:10:2.68:11,3,0	1/1:35,1:36:23.12:476,23,0	0/1:23,0:22:27.11:239,0,27	1/1:28,2:30:18.70:409,19,0	0/1:29,0:28:32.57:33,0,204	0/1:13,0:13:30.32:118,0,30	0/1:27,0:27:22.55:209,0,23	1/1:24,0:23:16.37:206,16,0	0/1:9,6:15:76.65:77,0,215	0/1:12,4:14:12.18:12,0,179	0/0:38,1:36:49.47:0,49,428	1/1:15,0:15:18.81:172,19,0	0/1:12,0:12:4.36:174,0,4	0/1:34,1:35:22.47:306,0,22	1/1:26,1:27:24.11:300,24,0	1/1:25,1:25:11.13:412,11,0	0/0:13,0:13:25.78:0,26,243	1/1:3,0:3:5.99:50,6,0
chr10	31303439	.	CGT	C	521.90	PASS	AB=1.000;AC=8;AF=0.143;AN=56;BaseQRankSum=1.560;DP=593;FS=20.274;HRun=0;HaplotypeScore=120.9315;InbreedingCoeff=0.0765;MQ=65.02;MQ0=8;MQRankSum=0.136;QD=3.11;ReadPosRankSum=-0.653;VQSLOD=0.7725;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:34:10.38:0,10,279	0/0:9,0:9:11.39:0,11,91	0/0:21,0:17:51.06:0,51,702	0/0:28,0:24:67.07:0,67,994	0/1:13,0:13:13.15:13,0,57	0/0:18,0:17:18.91:0,19,169	0/1:32,0:32:40.11:40,0,215	0/0:26,0:25:28.82:0,29,172	0/0:13,0:12:29.46:0,29,318	1/1:2,16:18:29.94:529,30,0	0/0:1,9:10:2.60:0,3,10	0/1:36,0:36:9.01:9,0,245	0/0:22,0:21:14.02:0,14,261	0/1:30,0:30:16.60:17,0,166	0/0:30,0:29:64.50:0,64,662	0/1:14,0:14:7.16:7,0,201	0/0:26,0:26:31.15:0,31,344	0/0:23,0:22:25.39:0,25,204	0/0:14,0:14:4.66:0,5,354	0/0:15,0:13:24.70:0,25,350	0/0:36,0:34:62.95:0,63,912	0/0:14,0:14:8.90:0,9,94	0/0:12,0:12:5.41:0,5,96	0/0:34,0:34:28.82:0,29,383	0/0:24,0:24:23.72:0,24,203	0/1:25,0:24:41.43:41,0,171	0/0:13,0:13:27.09:0,27,409	0/0:3,0:3:2.94:0,3,24
chr10	31303513	.	TA	T	8528.84	PASS	AB=0.571;AC=35;AF=0.625;AN=56;BaseQRankSum=8.776;DP=588;FS=1.956;HRun=9;HaplotypeScore=71.6334;InbreedingCoeff=0.8920;MQ=75.17;MQ0=0;MQRankSum=-2.054;QD=22.27;ReadPosRankSum=2.150;VQSLOD=5.8142;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,33:34:83.89:748,84,0	1/1:2,11:13:30.01:274,30,0	0/0:20,0:20:35.76:0,36,436	0/0:12,0:12:1.43:0,1,88	1/1:3,18:21:50.98:459,51,0	1/1:0,21:21:62.96:566,63,0	1/1:4,23:27:48.02:439,48,0	1/1:5,20:25:56.94:495,57,0	0/0:11,1:12:8.64:0,9,354	0/0:25,0:25:72.20:0,72,809	0/0:24,0:24:60.16:0,60,673	1/1:3,22:25:63.03:577,63,0	1/1:1,12:13:33.02:302,33,0	1/1:2,29:31:84.04:768,84,0	0/0:25,0:25:69.21:0,69,796	1/1:1,18:19:54.03:494,54,0	1/1:1,19:20:57.03:521,57,0	1/1:3,17:20:48.03:439,48,0	0/0:22,0:22:60.18:0,60,692	0/0:25,0:25:69.20:0,69,789	0/0:21,0:21:51.14:0,51,578	0/1:3,9:12:7.71:193,0,8	1/1:4,11:16:32.04:280,32,0	1/1:2,20:22:54.03:494,54,0	1/1:0,21:21:63.03:577,63,0	1/1:6,26:32:29.47:628,29,0	0/0:19,0:19:54.16:0,54,623	1/1:1,10:11:30.01:275,30,0
chr10	31307024	.	AAC	A	4286.19	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-4.768;DP=704;FS=4.901;HRun=0;HaplotypeScore=157.4374;InbreedingCoeff=0.9998;MQ=78.94;MQ0=1;MQRankSum=-0.778;QD=40.44;ReadPosRankSum=0.775;VQSLOD=5.5644;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,99,1794	0/0:11,0:11:33.10:0,33,595	0/0:24,0:24:72.22:0,72,1261	0/0:24,0:22:52.20:0,52,1045	0/0:28,0:28:84.29:0,84,1617	0/0:25,0:24:75.20:0,75,1344	0/0:22,0:22:66.19:0,66,1205	0/0:28,0:28:81.25:0,81,1445	0/0:26,0:26:78.27:0,78,1493	0/0:29,0:29:87.30:0,87,1674	0/0:31,0:31:90.29:0,90,1688	0/0:30,0:30:90.28:0,90,1669	0/0:24,0:24:72.25:0,72,1383	0/0:37,0:37:99:0,102,1867	0/0:24,0:24:69.22:0,69,1298	0/0:19,0:19:57.20:0,57,1100	0/0:35,0:35:99:0,105,1976	0/0:23,0:23:63.16:0,63,1177	1/1:1,21:21:60.17:857,60,0	1/1:0,22:22:63.12:913,63,0	1/1:1,30:31:87.29:1323,87,0	0/0:23,0:23:69.22:0,69,1297	0/0:19,0:19:57.18:0,57,1066	0/0:29,0:29:84.18:0,84,1579	0/0:25,0:25:72.21:0,72,1279	0/0:18,0:18:54.19:0,54,1043	1/1:1,30:31:78.25:1194,78,0	0/0:10,0:10:30.10:0,30,579
chr10	31307676	.	GCTTCT	G	32901.30	PASS	AB=0.540;AC=43;AF=0.768;AN=56;BaseQRankSum=11.702;DP=775;FS=1.434;HRun=0;HaplotypeScore=168.4609;InbreedingCoeff=0.8966;MQ=83.09;MQ0=0;MQRankSum=-13.886;QD=53.94;ReadPosRankSum=3.925;VQSLOD=5.0486;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,41:42:99:2157,102,0	1/1:0,11:11:24.08:521,24,0	0/0:27,0:27:69.24:0,69,2021	0/0:28,0:28:78.27:0,78,2159	1/1:1,31:32:90.31:1845,90,0	1/1:1,13:14:39.13:846,39,0	1/1:0,34:34:96.33:2053,96,0	1/1:1,18:19:54.16:1054,54,0	0/0:26,0:26:78.27:0,78,2474	0/0:32,0:32:96.32:0,96,2765	0/0:23,0:23:66.22:0,66,1974	1/1:0,46:46:99:2604,120,0	1/1:0,20:20:51.18:1104,51,0	1/1:1,30:31:75.26:1627,75,0	0/0:29,0:29:87.28:0,87,2625	1/1:1,29:30:75.26:1628,75,0	1/1:0,45:45:99:2345,108,0	1/1:1,23:24:54.19:1173,54,0	1/1:1,28:29:81.24:1699,81,0	1/1:0,23:23:69.23:1382,69,0	1/1:4,37:41:81.28:1695,81,0	1/1:0,24:24:69.11:1497,69,0	1/1:0,26:26:69.24:1497,69,0	1/1:2,23:25:51.18:1097,51,0	1/1:1,23:24:66.23:1433,66,0	0/1:5,29:34:99:1784,0,267	1/1:2,27:29:72.25:1535,72,0	1/1:0,7:7:15.05:326,15,0
chr10	31308167	.	G	GAA	14709.59	PASS	AB=0.673;AC=35;AF=0.625;AN=56;BaseQRankSum=0.912;DP=741;FS=53.057;HRun=1;HaplotypeScore=253.6476;InbreedingCoeff=0.3111;MQ=80.16;MQ0=15;MQRankSum=-10.250;QD=30.90;ReadPosRankSum=-0.831;VQSLOD=1.3856;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:10,7:13:2.09:457,0,2	1/1:2,5:7:21.07:385,21,0	0/0:52,0:38:59.92:0,60,840	0/0:99,0:68:78.26:0,78,1069	0/1:12,23:32:40.54:400,0,41	1/1:9,10:18:47.89:649,48,0	1/1:6,5:10:1.30:240,1,0	0/1:20,25:33:15.28:1204,0,15	0/0:15,0:15:45.14:0,45,667	0/0:37,0:37:58.59:0,59,1065	0/0:28,0:28:45.02:0,45,614	1/1:9,14:23:39.50:777,40,0	0/1:17,15:31:99:768,0,101	0/1:6,15:21:21.58:722,0,22	0/0:33,0:33:99:0,99,1514	1/1:6,12:16:17.42:532,17,0	0/1:11,5:16:15.96:252,0,16	1/1:5,5:9:20.82:250,21,0	1/1:3,10:13:33.11:616,33,0	1/1:2,34:36:99:1786,108,0	1/1:0,5:5:11.97:191,12,0	1/1:8,11:18:15.09:506,15,0	1/1:9,20:27:49.17:1036,49,0	0/1:10,8:15:38.10:113,0,38	1/1:6,21:24:25.74:1018,26,0	0/1:13,15:26:21.11:959,0,21	1/1:4,29:35:99:1755,102,0	0/1:7,4:10:12.61:94,0,13
chr10	31308171	.	A	AAGAGAAAGAGAT	6212.73	PASS	AB=0.999;AC=24;AF=0.429;AN=56;BaseQRankSum=-5.017;DP=724;FS=17.704;HRun=0;HaplotypeScore=384.2249;InbreedingCoeff=-0.4133;MQ=77.89;MQ0=18;MQRankSum=0.934;QD=12.70;ReadPosRankSum=-10.224;VQSLOD=0.6392;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:15,0:11:47.69:48,0,101	0/1:9,0:9:30.31:30,0,68	0/0:55,0:39:15.57:0,16,399	0/0:83,0:59:7.01:0,7,266	0/1:33,0:31:75.14:153,0,75	0/1:20,0:18:62.68:63,0,124	0/1:10,0:9:40.74:63,0,41	0/1:44,0:31:24.21:56,0,24	0/0:14,0:14:33.09:0,33,748	1/1:3,33:41:99:2687,100,0	1/1:6,21:30:29.96:557,30,0	0/1:21,0:21:81:246,0,81	0/1:33,0:31:81.83:637,0,82	0/1:20,0:20:99:204,0,264	0/0:33,0:33:78.25:0,78,2265	0/1:19,0:17:91.15:91,0,110	0/1:14,0:13:25.61:157,0,26	0/1:8,0:7:5.50:38,0,6	0/0:11,0:11:16.28:0,16,180	0/1:37,0:37:29.50:29,0,361	0/1:5,0:5:6.82:10,0,7	0/1:16,0:15:27.34:178,0,27	0/1:30,0:27:99:125,0,185	0/1:18,0:15:31.62:131,0,32	0/1:28,0:25:99:120,0,183	0/1:26,0:25:99:245,0,101	0/0:34,0:35:20.69:0,21,566	0/1:11,0:10:5.07:346,0,5
chr10	31308179	.	GAGAT	G	4663.49	PASS	AB=0.983;AC=24;AF=0.429;AN=56;BaseQRankSum=-2.190;DP=730;FS=2.513;HRun=0;HaplotypeScore=305.2968;InbreedingCoeff=-0.6331;MQ=65.47;MQ0=20;MQRankSum=-2.224;QD=8.21;ReadPosRankSum=-9.550;VQSLOD=1.4590;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:16,0:12:16.82:17,0,106	0/1:10,0:10:50.18:123,0,50	0/0:42,0:30:35.42:0,35,915	0/1:68,0:43:93.98:94,0,545	0/1:37,0:33:99:349,0,103	0/1:20,0:17:66.43:222,0,66	0/1:10,0:9:38.92:66,0,39	0/1:36,7:28:99:416,0,337	0/0:14,0:14:42.14:0,42,1013	0/0:38,0:38:90.26:0,90,1373	0/0:33,0:33:60.06:0,60,881	0/1:21,0:21:99:108,0,197	0/1:38,0:36:99:426,0,224	0/1:20,1:21:94.80:293,0,95	0/0:33,0:33:96.31:0,96,2349	0/1:20,1:19:99:259,0,139	0/1:16,0:15:21.16:115,0,21	0/1:9,0:8:20.94:158,0,21	0/1:11,0:11:69.34:69,0,104	0/1:38,0:38:99:357,0,319	1/1:4,0:4:2.75:45,3,0	0/1:15,2:16:48.23:335,0,48	0/1:35,1:32:99:378,0,166	0/1:21,0:17:33.97:71,0,34	0/1:33,0:30:99:189,0,152	0/1:28,0:25:99:282,0,209	0/1:37,0:37:99:235,0,336	0/1:12,0:11:56.97:57,0,134
chr10	31308183	.	T	TAG	13662.14	PASS	AB=0.803;AC=38;AF=0.679;AN=56;BaseQRankSum=5.160;DP=722;FS=11.327;HRun=0;HaplotypeScore=255.3246;InbreedingCoeff=0.3396;MQ=61.86;MQ0=21;MQRankSum=-9.795;QD=24.22;ReadPosRankSum=-1.540;VQSLOD=3.7021;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:11,6:13:20.12:256,0,20	1/1:5,5:10:27.08:395,27,0	0/0:38,0:25:35.35:0,35,477	0/1:62,0:38:77.18:77,0,257	1/1:16,19:31:4.99:677,5,0	1/1:10,9:16:39.07:644,39,0	1/1:7,4:10:16.28:273,16,0	0/1:41,5:30:53.62:624,0,54	0/0:15,0:15:42.12:0,42,558	0/0:38,0:38:57.17:0,57,974	0/0:33,0:33:39.58:0,40,517	0/1:15,6:21:51.20:426,0,51	1/1:24,10:32:54.61:924,55,0	1/1:9,12:21:51.12:825,51,0	0/0:34,0:34:87.27:0,87,1178	1/1:12,11:21:8.25:679,8,0	1/1:9,5:14:3.53:264,4,0	1/1:6,4:9:15.05:222,15,0	1/1:4,8:12:24.04:425,24,0	1/1:5,32:37:96.33:1668,96,0	1/1:1,3:4:6.02:104,6,0	0/1:7,11:17:1.99:545,0,2	1/1:14,22:32:81.07:1291,81,0	0/1:17,3:16:55.80:83,0,56	0/1:20,17:34:0.78:774,0,1	1/1:20,11:29:29.37:862,29,0	1/1:4,30:34:73.18:1508,73,0	0/1:8,2:9:40.37:120,0,40
chr10	31308185	.	G	GAA	10122.56	PASS	AB=0.864;AC=35;AF=0.625;AN=56;BaseQRankSum=6.694;DP=738;FS=9.677;HRun=1;HaplotypeScore=275.8600;InbreedingCoeff=0.0843;MQ=62.70;MQ0=19;MQRankSum=-9.702;QD=17.45;ReadPosRankSum=0.909;VQSLOD=1.5222;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:13,3:13:21.49:187,0,21	1/1:7,3:10:27.02:344,27,0	0/0:39,0:27:42.65:0,43,577	0/1:61,1:39:55.52:56,0,372	0/1:26,8:30:38.17:504,0,38	1/1:19,1:17:26.07:414,26,0	1/1:11,1:11:0.24:157,0,0	0/1:44,2:30:99:380,0,214	0/0:14,0:14:42.14:0,42,641	0/0:37,0:37:90.84:0,91,1360	0/0:34,0:34:59.88:0,60,745	0/1:16,4:21:73.82:349,0,74	1/1:24,10:34:49:944,49,0	1/1:15,4:19:51.15:635,51,0	0/0:33,0:33:93.28:0,93,1377	1/1:17,6:21:8.16:503,8,0	0/1:13,3:15:24.45:230,0,24	0/1:11,1:11:25.97:141,0,26	1/1:12,0:12:7.04:243,7,0	1/1:37,0:37:96.23:1098,96,0	1/1:4,0:4:6.02:68,6,0	1/1:18,1:18:1.55:399,2,0	1/1:33,5:34:81.96:978,82,0	0/1:16,2:15:68.69:69,0,81	0/1:35,5:37:48.21:591,0,48	0/1:31,6:34:9.44:752,0,9	1/1:34,0:34:50.93:944,51,0	0/1:7,3:9:92.98:137,0,93
chr10	31308217	.	TAGAG	T	2857.55	PASS	AB=0.600;AC=7;AF=0.125;AN=56;BaseQRankSum=4.740;DP=818;FS=0.474;HRun=0;HaplotypeScore=313.8682;InbreedingCoeff=0.7673;MQ=52.01;MQ0=19;MQRankSum=-8.161;QD=42.65;ReadPosRankSum=-1.308;VQSLOD=2.8797;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:21:46.28:0,46,839	0/0:15,0:15:39.13:0,39,907	0/0:25,0:14:9.98:0,10,394	0/0:36,0:19:35.84:0,36,608	0/0:47,0:43:88.47:0,88,1625	0/0:22,0:19:51.65:0,52,1281	0/0:22,0:18:48.16:0,48,1196	0/0:100,0:80:99:0,213,4841	0/0:19,0:19:57.18:0,57,1453	0/0:40,0:40:99:0,107,2573	0/0:29,0:29:65.89:0,66,1621	0/0:23,0:21:53.97:0,54,1044	0/0:36,0:34:96.78:0,97,2135	0/0:24,0:22:57.19:0,57,1306	0/0:28,0:28:84.27:0,84,2148	0/0:26,0:23:54.12:0,54,1142	0/0:25,0:21:31.64:0,32,883	0/0:20,0:17:45.06:0,45,976	0/1:4,8:11:51.19:391,0,51	1/1:4,23:27:75.09:1203,75,0	1/1:0,3:2:5.98:57,6,0	0/0:28,0:28:60.49:0,60,1396	0/0:45,0:40:99:0,113,2532	0/0:21,0:16:8.03:0,8,245	0/0:36,0:33:40.45:0,40,1768	0/0:42,0:38:99:0,103,2522	1/1:3,22:25:75.15:1349,75,0	0/0:17,0:17:39.87:0,40,675
chr10	31308253	.	A	AAGAGAT	9318.05	PASS	AB=0.922;AC=35;AF=0.625;AN=56;BaseQRankSum=1.910;DP=812;FS=8.489;HRun=0;HaplotypeScore=258.4354;InbreedingCoeff=0.3373;MQ=43.15;MQ0=53;MQRankSum=-6.724;QD=14.08;ReadPosRankSum=-1.637;VQSLOD=2.6952;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:24,1:21:99:172,0,113	0/1:16,1:17:24.83:396,0,25	0/0:23,0:13:19.92:0,20,215	0/0:27,0:9:3.49:0,3,76	0/1:40,3:38:46.25:527,0,46	1/1:22,1:18:21.06:383,21,0	0/1:22,0:15:0:0,0,0	1/1:86,0:62:44.50:720,45,0	0/0:22,0:22:48.14:0,48,880	0/0:29,0:29:60.20:0,60,1176	0/0:27,0:27:60.18:0,60,1119	1/1:21,4:20:27.07:573,27,0	0/1:33,1:30:87.66:389,0,88	1/1:23,2:17:7.89:356,8,0	0/0:21,0:21:45.13:0,45,837	0/1:23,22:37:81.44:448,0,81	0/1:30,1:23:39.96:110,0,40	1/1:25,1:17:24.47:356,24,0	1/1:15,0:14:17.38:198,17,0	1/1:28,0:28:45.54:453,46,0	1/1:9,0:8:8.39:74,8,0	1/1:29,5:31:48.15:1005,48,0	1/1:41,6:42:57.09:1036,57,0	1/1:22,2:17:14.73:127,15,0	0/1:30,3:32:49.40:621,0,49	0/1:36,3:33:2.48:846,0,2	1/1:16,0:16:24.06:263,24,0	1/1:13,1:14:18.05:264,18,0
chr10	31308271	.	T	TAGAG	7771.94	PASS	AB=0.925;AC=27;AF=0.482;AN=56;BaseQRankSum=2.084;DP=814;FS=5.102;HRun=0;HaplotypeScore=216.5608;InbreedingCoeff=-0.2069;MQ=41.41;MQ0=70;MQRankSum=-5.547;QD=11.90;ReadPosRankSum=6.018;VQSLOD=3.7384;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:20,4:22:99:214,0,241	0/1:15,2:16:99:269,0,137	0/0:25,0:10:29.73:0,30,368	0/0:32,0:7:12.93:0,13,145	0/1:43,5:40:99:369,0,218	0/1:22,0:16:26.67:126,0,27	0/1:21,0:13:33.40:33,0,83	0/1:63,0:43:99:146,0,518	0/0:21,0:21:60.16:0,60,1003	0/0:29,0:28:78.26:0,78,1383	0/0:28,0:28:78.20:0,78,1307	0/1:23,2:19:4.98:270,0,5	0/1:32,4:28:99:340,0,278	0/1:23,5:17:83.23:233,0,83	0/0:25,0:24:63.17:0,63,1054	0/1:39,5:36:98.97:418,0,99	0/1:27,2:19:99:131,0,194	0/1:25,0:17:61.54:62,0,187	1/1:3,10:13:30.08:651,30,0	1/1:5,23:28:48.16:1183,48,0	1/1:2,12:13:11.96:228,12,0	0/1:33,3:31:99:540,0,144	0/1:38,6:41:99:673,0,215	0/1:18,4:15:56.64:179,0,57	0/1:36,1:32:99:191,0,269	0/1:39,3:32:99:432,0,252	1/1:4,13:17:28.28:650,28,0	1/1:7,6:18:18.06:436,18,0
chr10	31308401	.	GAT	G	6636.85	PASS	AB=0.845;AC=24;AF=0.429;AN=56;BaseQRankSum=1.593;DP=918;FS=17.249;HRun=0;HaplotypeScore=200.9290;InbreedingCoeff=-0.4832;MQ=45.24;MQ0=89;MQRankSum=0.702;QD=8.21;ReadPosRankSum=-2.538;VQSLOD=2.9991;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:47,12:48:99:513,0,673	0/1:8,14:20:99:355,0,104	0/0:16,0:2:6.02:0,6,116	0/1:35,0:12:8.39:8,0,61	0/1:32,17:40:99:551,0,580	0/1:18,5:17:99:215,0,283	0/1:31,4:29:47.08:47,0,647	0/1:73,19:58:99:408,0,1995	0/0:16,0:15:48.13:0,48,858	1/1:2,28:28:81.24:1173,81,0	1/1:1,18:18:45.15:687,45,0	0/1:30,2:25:54.26:54,0,808	0/1:28,9:30:99:319,0,585	0/1:24,7:21:99:252,0,265	0/0:20,0:19:51.17:0,51,983	0/1:19,4:17:99:169,0,311	0/1:27,12:28:99:348,0,360	0/1:32,5:32:99:197,0,700	0/0:20,1:17:2.15:0,2,781	0/0:26,0:26:72.23:0,72,1339	0/0:11,0:11:26.66:0,27,486	0/1:17,7:21:99:351,0,361	0/1:40,8:40:99:277,0,752	0/1:31,4:30:99:101,0,373	0/1:26,4:28:99:206,0,530	0/1:48,11:47:99:349,0,1165	0/1:32,3:34:41.03:41,0,1438	0/1:13,1:14:15.56:16,0,456
chr10	31308516	.	ATAGAG	A	47.18	PASS	AB=0.797;AC=4;AF=0.071;AN=56;BaseQRankSum=7.222;DP=674;FS=29.995;HRun=0;HaplotypeScore=197.8218;InbreedingCoeff=-0.0765;MQ=64.80;MQ0=16;MQRankSum=-4.618;QD=0.76;ReadPosRankSum=1.288;VQSLOD=1.3750;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,1:29:57.75:0,58,1890	0/1:2,2:4:30.42:30,0,94	0/0:46,0:20:42.44:0,42,616	0/0:73,0:33:58.98:0,59,885	0/0:19,2:19:32.70:0,33,981	0/0:12,0:12:36.12:0,36,1088	0/0:18,0:15:33.11:0,33,987	0/0:49,0:42:99:0,129,3668	0/0:14,0:14:42.14:0,42,1288	0/0:36,0:37:99:0,108,3184	0/0:32,0:32:87.30:0,87,2716	0/0:17,0:17:39.12:0,39,917	0/0:18,1:19:17.60:0,18,1323	0/0:17,0:14:39.13:0,39,1234	0/0:23,0:22:63.22:0,63,1840	0/0:15,0:14:24.08:0,24,689	0/0:19,2:19:20.95:0,21,1038	0/1:11,4:15:92.53:93,0,631	0/0:12,0:11:33.11:0,33,1015	0/0:28,0:28:66.22:0,66,2021	0/0:18,0:18:30.10:0,30,999	0/1:17,2:19:22.85:23,0,899	0/0:11,2:12:6.57:0,7,704	0/1:19,5:22:3.90:4,0,724	0/0:16,2:17:11.72:0,12,1390	0/0:26,1:26:29.61:0,30,2001	0/0:30,0:30:54.18:0,54,1456	0/0:20,0:20:54.18:0,54,1565
chr10	31308559	.	T	TAGAG	19927.96	PASS	AB=0.643;AC=43;AF=0.768;AN=56;BaseQRankSum=0.711;DP=595;FS=5.834;HRun=0;HaplotypeScore=132.8809;InbreedingCoeff=0.8784;MQ=63.95;MQ0=12;MQRankSum=-5.102;QD=45.71;ReadPosRankSum=0.726;VQSLOD=5.5862;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,8:14:29.77:706,30,0	1/1:2,3:5:12.04:335,12,0	0/0:23,0:12:22.16:0,22,223	0/0:48,0:25:18.09:0,18,470	1/1:8,10:23:49.05:1131,49,0	1/1:3,7:13:33.83:866,34,0	1/1:6,5:12:30.03:611,30,0	1/1:7,21:24:57.15:1016,57,0	0/0:12,0:12:33.09:0,33,585	0/0:29,0:29:84.28:0,84,1636	0/0:24,0:24:72.19:0,72,1344	1/1:0,14:15:27.09:747,27,0	1/1:9,8:18:45.14:1123,45,0	1/1:6,10:15:28.72:830,29,0	0/0:21,0:20:57.18:0,57,1089	1/1:0,12:13:12.04:295,12,0	1/1:6,6:12:22.49:480,22,0	1/1:8,4:17:32.44:594,32,0	1/1:0,11:13:36.11:848,36,0	1/1:0,23:25:42.14:1128,42,0	1/1:1,18:21:27.09:755,27,0	1/1:1,20:22:45.15:1205,45,0	1/1:5,17:24:57.18:1515,57,0	1/1:10,6:14:10.69:254,11,0	1/1:8,10:22:46.58:981,47,0	0/1:8,20:34:21.67:1853,0,22	1/1:1,33:37:63.22:1756,63,0	1/1:4,9:14:36.10:897,36,0
chr10	31308703	.	AAGAGAT	A	4380.82	PASS	AB=0.983;AC=27;AF=0.482;AN=56;BaseQRankSum=8.685;DP=545;FS=20.236;HRun=0;HaplotypeScore=146.9262;InbreedingCoeff=-0.3983;MQ=52.06;MQ0=10;MQRankSum=-1.585;QD=10.02;ReadPosRankSum=4.058;VQSLOD=2.5971;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:19,0:19:69.38:69,0,114	1/1:10,0:10:23.91:236,24,0	1/1:15,0:2:0.89:2,1,0	0/0:24,0:5:1.25:0,1,3	0/1:18,0:18:99:308,0,103	0/1:19,0:19:99:259,0,213	0/1:12,0:10:30.33:30,0,226	0/0:23,0:21:47.95:0,48,414	0/0:14,0:14:39.01:0,39,804	0/1:32,0:33:90.45:90,0,548	0/0:22,0:22:16.93:0,17,412	0/1:15,0:15:67.93:68,0,93	0/1:19,0:18:99:170,0,136	0/1:13,0:13:99:184,0,162	0/0:25,0:25:69.14:0,69,1541	0/1:19,0:18:99:170,0,146	0/1:15,0:15:46.55:47,0,67	1/1:11,0:11:18.04:218,18,0	0/1:11,1:11:69.91:224,0,70	0/1:28,2:29:75.16:479,0,75	0/1:16,0:15:0.89:1,0,160	0/1:19,0:19:77.06:310,0,77	0/1:20,0:19:99:102,0,222	0/1:16,0:16:34.73:35,0,138	0/1:24,0:24:99:148,0,212	0/1:37,0:37:99:361,0,476	0/1:28,4:32:99:487,0,327	1/1:11,0:11:5.10:384,5,0
chr10	31308709	.	TAGAGAA	T	7407.12	PASS	AB=0.961;AC=32;AF=0.615;AN=52;BaseQRankSum=-1.194;DP=508;FS=16.710;HRun=0;HaplotypeScore=135.9631;InbreedingCoeff=-0.0410;MQ=50.78;MQ0=7;MQRankSum=-0.702;QD=19.24;ReadPosRankSum=1.977;VQSLOD=3.7677;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:17:7.57:176,8,0	1/1:8,2:10:25.33:393,25,0	./.	./.	0/1:13,5:18:24.79:542,0,25	0/1:17,1:18:52.80:551,0,53	0/1:13,0:11:99:136,0,116	0/0:19,0:17:3.01:0,3,40	0/0:13,0:13:27.09:0,27,816	0/0:32,0:33:10.55:0,11,273	0/1:22,0:23:11.41:11,0,88	1/1:15,0:15:20.96:271,21,0	0/1:19,2:19:13.16:470,0,13	0/1:12,0:12:50.29:335,0,50	0/0:25,0:25:57.18:0,57,1419	0/1:15,1:15:8.03:347,0,8	1/1:13,0:13:17.85:192,18,0	1/1:7,1:8:18.06:350,18,0	1/1:12,0:11:0.10:173,0,0	1/1:28,0:27:30.99:368,31,0	0/1:15,0:14:42.78:49,0,43	1/1:11,6:17:36.11:594,36,0	0/1:16,0:15:59.49:243,0,59	0/1:16,0:16:20.72:91,0,21	1/1:20,1:21:23.22:374,23,0	0/1:35,2:36:99:803,0,155	0/1:28,0:28:63.56:350,0,64	1/1:4,7:11:27.09:587,27,0
chr10	31308775	.	AAGAG	A	11363.89	PASS	AB=1.000;AC=41;AF=0.732;AN=56;BaseQRankSum=-4.565;DP=653;FS=11.284;HRun=0;HaplotypeScore=139.3714;InbreedingCoeff=0.8789;MQ=61.24;MQ0=18;MQRankSum=-3.140;QD=24.03;ReadPosRankSum=2.480;VQSLOD=4.3406;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,17:23:6.53:316,7,0	1/1:1,9:10:24.04:385,24,0	0/0:48,0:11:13.05:0,13,107	0/1:72,0:24:13.98:14,0,177	1/1:4,13:17:45.02:685,45,0	1/1:7,10:18:51:705,51,0	1/1:6,9:14:14.88:132,15,0	1/1:22,27:39:69.20:1106,69,0	0/0:11,0:11:24.08:0,24,548	1/1:8,0:38:33.32:519,33,0	1/1:1,0:25:36.33:279,36,0	1/1:0,15:15:38.98:551,39,0	1/1:6,14:18:54.14:878,54,0	1/1:1,8:9:15.01:229,15,0	0/0:22,0:22:57.14:0,57,1171	1/1:0,13:13:27.09:469,27,0	1/1:3,13:16:15.29:455,15,0	1/1:2,14:16:24.08:417,24,0	0/0:5,0:9:19.53:0,20,88	0/0:5,0:36:87.54:0,88,423	0/0:3,0:15:21.64:0,22,100	1/1:2,5:7:14.92:164,15,0	1/1:6,11:16:42.10:671,42,0	1/1:11,11:21:36.55:531,37,0	1/1:2,9:11:33.03:509,33,0	1/1:17,14:31:56.34:1158,56,0	0/0:9,0:36:50.34:0,50,228	1/1:5,23:28:75.08:1192,75,0
chr10	31309606	.	C	CAG	533.27	PASS	AB=1.000;AC=32;AF=0.762;AN=42;BaseQRankSum=-0.199;DP=501;FS=16.842;HRun=0;HaplotypeScore=102.1597;InbreedingCoeff=0.3421;MQ=66.31;MQ0=5;MQRankSum=-2.194;QD=1.55;ReadPosRankSum=0.541;VQSLOD=0.2559;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:26:2.99:23,3,0	./.	./.	0/1:25,0:16:0:0,0,0	./.	1/1:18,0:18:3.01:39,3,0	1/1:12,0:12:5.99:61,6,0	1/1:29,0:28:3.74:9,4,0	1/1:17,5:21:2.92:44,3,0	1/1:15,0:15:5.93:45,6,0	./.	0/1:18,0:17:0:0,0,0	0/1:15,0:15:0:0,0,0	0/0:21,0:21:1.25:0,1,3	0/0:18,0:18:7.74:0,8,32	1/1:22,0:21:3:26,3,0	1/1:20,0:20:11.99:114,12,0	1/1:16,0:15:6.65:34,7,0	./.	0/1:25,0:24:0:0,0,0	1/1:17,0:17:6:66,6,0	./.	./.	0/0:15,0:15:0:0,0,0	1/1:16,0:16:3:27,3,0	1/1:16,0:16:12.60:78,13,0	1/1:17,0:17:3.46:25,3,0	1/1:14,0:14:6.21:32,6,0
chr10	31312162	.	C	CA	2101.75	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=-7.925;DP=555;FS=13.110;HRun=8;HaplotypeScore=57.8008;InbreedingCoeff=0.9262;MQ=74.42;MQ0=0;MQRankSum=-0.705;QD=22.60;ReadPosRankSum=-1.185;VQSLOD=2.6283;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:84.03:0,84,769	0/0:7,0:8:23.05:0,23,198	0/1:9,0:9:0.01:0,0,67	0/0:12,0:12:20.02:0,20,157	0/0:23,0:23:63.02:0,63,575	0/0:15,0:15:42.02:0,42,384	0/0:32,0:32:87.01:0,87,791	0/0:21,0:21:45:0,45,408	0/0:16,0:16:42.02:0,42,384	0/0:35,0:35:93.04:0,93,849	0/0:13,0:13:30.01:0,30,275	0/0:22,0:22:63:0,63,567	0/0:19,0:19:54.03:0,54,493	0/0:24,0:24:68.04:0,68,600	0/0:19,0:19:54.02:0,54,490	0/0:15,0:15:42.02:0,42,384	0/0:23,0:23:66.01:0,66,597	0/0:24,0:24:56.89:0,57,499	1/1:2,20:22:60.14:670,60,0	1/1:2,15:17:39.12:450,39,0	1/1:4,16:20:42.12:485,42,0	0/0:24,0:25:71.04:0,71,629	0/0:14,0:14:39.01:0,39,353	0/0:21,0:21:54.03:0,54,494	0/0:22,0:22:66.04:0,66,604	0/0:22,1:23:28.41:0,28,514	1/1:2,22:25:57.17:657,57,0	0/0:6,0:6:18.01:0,18,165
chr10	31312357	.	G	GGTGTGTGTGT	7614.60	PASS	AC=46;AF=0.920;AN=50;BaseQRankSum=1.217;DP=695;FS=2.002;HRun=0;HaplotypeScore=215.9555;InbreedingCoeff=0.4624;MQ=60.08;MQ0=10;MQRankSum=-4.501;QD=13.82;ReadPosRankSum=-4.161;VQSLOD=2.9436;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:51,0:50:12.21:383,12,0	1/1:5,0:5:3.01:108,3,0	./.	./.	1/1:17,0:17:12.02:249,12,0	1/1:11,0:16:3.01:148,3,0	1/1:32,0:31:21:472,21,0	1/1:23,0:23:9.03:338,9,0	0/0:25,0:25:25.25:0,25,674	1/1:25,1:25:34.21:661,34,0	1/1:13,0:14:6.49:230,6,0	1/1:23,8:32:2.85:148,3,0	1/1:24,0:23:12:298,12,0	1/1:19,8:27:6.02:251,6,0	0/0:36,0:37:36.56:0,37,858	1/1:18,6:27:6.45:255,6,0	1/1:30,0:30:18.53:622,19,0	1/1:19,4:26:19.62:641,20,0	1/1:21,0:20:15.05:550,15,0	./.	1/1:43,0:41:18.04:474,18,0	1/1:18,0:18:6.02:127,6,0	1/1:11,0:16:3.01:91,3,0	1/1:19,9:29:3.01:149,3,0	1/1:14,0:13:6.02:185,6,0	1/1:27,0:27:24.08:654,24,0	1/1:26,0:27:15.05:518,15,0	1/1:5,0:4:3.01:66,3,0
chr10	31312687	.	GT	G	4250.59	PASS	AB=0.613;AC=35;AF=0.648;AN=54;BaseQRankSum=9.989;DP=550;FS=12.951;HRun=1;HaplotypeScore=143.5036;InbreedingCoeff=0.2544;MQ=59.35;MQ0=15;MQRankSum=-0.465;QD=9.70;ReadPosRankSum=9.456;VQSLOD=0.5188;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:13,15:27:1.93:288,0,2	./.	0/0:39,0:14:34.08:0,34,413	0/0:26,0:14:23.79:0,24,345	1/1:7,7:14:8.49:122,8,0	1/1:8,13:21:4.08:244,4,0	1/1:11,13:24:8.04:263,8,0	0/1:5,8:23:16.50:189,0,17	0/0:14,0:14:42.14:0,42,661	0/1:6,1:18:99:114,0,105	0/1:7,1:14:20.69:31,0,21	0/1:18,10:29:68.30:248,0,68	0/1:4,12:16:1.62:179,0,2	1/1:2,25:27:76.34:518,76,0	0/0:30,0:30:90.17:0,90,1364	1/1:7,13:20:10.50:283,11,0	0/1:7,15:22:17.80:236,0,18	1/1:4,16:20:11.67:307,12,0	0/1:3,0:10:36.28:56,0,36	1/1:0,0:9:15.58:60,16,0	1/1:5,0:43:23:157,23,0	1/1:3,8:13:8.51:103,9,0	1/1:2,7:12:15.60:133,16,0	1/1:11,17:28:18.72:376,19,0	1/1:4,9:13:27.07:181,27,0	0/1:3,3:11:42.07:83,0,42	1/1:3,0:13:20.77:81,21,0	0/0:3,0:3:8.84:0,9,57
chr10	31312689	.	GT	G	5283.69	PASS	AB=1.000;AC=43;AF=0.796;AN=54;BaseQRankSum=8.711;DP=560;FS=21.452;HRun=1;HaplotypeScore=142.5338;InbreedingCoeff=0.7845;MQ=60.48;MQ0=15;MQRankSum=3.249;QD=11.79;ReadPosRankSum=6.952;VQSLOD=1.6611;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,15:27:29.63:326,30,0	./.	0/0:36,0:12:17.55:0,18,288	0/0:28,0:16:19.63:0,20,358	1/1:6,7:13:15.91:127,16,0	1/1:9,13:22:28.75:274,29,0	1/1:9,13:22:31.69:290,32,0	1/1:15,8:23:16.16:240,16,0	0/0:14,0:14:42.10:0,42,559	1/1:18,1:19:34.59:165,35,0	1/1:13,1:14:12.38:52,12,0	1/1:21,10:31:4.19:299,4,0	1/1:5,12:17:23.63:227,24,0	1/1:5,24:28:78.13:539,78,0	0/0:30,0:30:89.45:0,89,1159	1/1:9,13:21:33.37:317,33,0	1/1:7,15:22:19.45:260,19,0	1/1:4,16:20:30.48:313,30,0	0/1:11,0:10:15.48:142,0,15	1/1:9,0:9:17.74:115,18,0	1/1:45,1:43:58.90:377,59,0	1/1:8,8:16:22.60:172,23,0	1/1:5,7:12:20.97:140,21,0	1/1:13,18:31:56.25:508,56,0	1/1:5,8:13:28.41:188,28,0	1/1:8,3:11:1.71:57,2,0	1/1:16,0:13:23.65:154,24,0	0/0:3,0:3:8.24:0,8,36
chr10	31312696	.	GGT	G	419.50	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=0.192;DP=550;FS=37.626;HRun=0;HaplotypeScore=159.8845;InbreedingCoeff=0.6318;MQ=61.22;MQ0=15;MQRankSum=-4.231;QD=6.45;ReadPosRankSum=0.902;VQSLOD=1.4944;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:69.81:0,70,710	0/0:2,0:2:5.95:0,6,61	0/1:33,0:10:16.96:17,0,223	0/0:25,0:14:16.13:0,16,345	0/0:11,0:11:16.85:0,17,109	0/0:21,0:21:56.14:0,56,491	0/0:23,0:23:58.84:0,59,558	0/0:24,0:24:49.63:0,50,515	0/0:15,0:15:42.09:0,42,651	1/1:8,10:18:46.19:359,46,0	1/1:8,6:14:22.91:171,23,0	0/0:28,0:28:73.59:0,74,830	0/0:18,0:18:9.53:0,10,306	0/0:30,0:29:59.37:0,59,414	0/0:27,0:27:72.23:0,72,1215	0/0:22,0:21:48.81:0,49,456	0/0:21,0:21:43.59:0,44,395	0/0:20,0:20:47.03:0,47,323	0/0:13,0:11:29.24:0,29,302	0/0:9,0:9:18.05:0,18,194	0/0:44,0:41:62.96:0,63,663	0/0:15,0:15:27.31:0,27,304	0/0:12,0:12:3.90:0,4,127	0/0:32,0:32:81.49:0,81,729	0/0:11,0:11:4.80:0,5,81	0/0:8,0:8:14.16:0,14,180	0/0:20,0:17:33.43:0,33,327	0/0:5,0:5:15.02:0,15,175
chr10	31312697	.	GT	G	762.65	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-0.913;DP=552;FS=17.261;HRun=1;HaplotypeScore=151.0745;InbreedingCoeff=0.8520;MQ=63.05;MQ0=15;MQRankSum=-3.924;QD=23.83;ReadPosRankSum=-0.517;VQSLOD=2.0375;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:31:83.29:0,83,808	0/0:2,0:2:5.94:0,6,43	0/0:30,0:9:11.56:0,12,283	0/0:26,1:16:3.98:0,4,355	0/0:13,0:13:26.77:0,27,227	0/0:21,0:21:60.05:0,60,602	0/0:24,0:24:62.82:0,63,635	0/0:22,0:22:53.25:0,53,564	0/0:15,0:15:45.09:0,45,581	1/1:11,6:18:51.16:627,51,0	1/1:7,6:14:23.98:256,24,0	0/0:28,0:28:80.52:0,81,834	0/0:18,0:18:48.20:0,48,435	0/0:30,0:29:82.55:0,83,666	0/0:26,0:26:78.25:0,78,1102	0/0:22,0:21:56.09:0,56,535	0/0:21,0:21:59.69:0,60,555	0/0:20,0:20:50.95:0,51,468	0/0:13,0:11:26.58:0,27,267	0/0:9,0:9:18.03:0,18,176	0/0:43,0:40:62.88:0,63,581	0/0:15,0:15:40.08:0,40,337	0/0:11,0:11:21.28:0,21,203	0/0:32,0:32:91.54:0,92,830	0/0:11,0:11:25.22:0,25,214	0/0:8,0:8:20.89:0,21,210	0/0:22,0:19:37.51:0,38,300	0/0:5,0:5:15.02:0,15,171
chr10	31314876	.	T	TG	9216.70	PASS	AB=0.545;AC=43;AF=0.768;AN=56;BaseQRankSum=-9.590;DP=615;FS=3.222;HRun=9;HaplotypeScore=77.1239;InbreedingCoeff=0.8144;MQ=78.29;MQ0=0;MQRankSum=-2.001;QD=18.77;ReadPosRankSum=-0.452;VQSLOD=5.0356;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:18,33:51:81.21:890,81,0	1/1:5,3:8:9.01:91,9,0	0/0:14,1:15:14.12:0,14,142	0/0:21,0:21:19.03:0,19,223	1/1:7,16:23:19:423,19,0	1/1:6,18:24:26.90:446,27,0	1/1:6,12:18:4.03:273,4,0	1/1:10,15:25:13.21:281,13,0	0/0:22,0:22:44.98:0,45,390	0/0:21,0:21:47.97:0,48,416	0/0:18,0:18:44.98:0,45,388	1/1:7,20:27:48.11:520,48,0	1/1:7,9:16:39.01:391,39,0	1/1:6,22:29:30.86:556,31,0	0/0:27,0:27:61.99:0,62,527	1/1:2,14:16:10.04:339,10,0	1/1:3,23:26:63.17:697,63,0	1/1:6,16:22:22.04:458,22,0	1/1:7,18:26:44.90:489,45,0	1/1:4,10:14:21.06:232,21,0	1/1:12,14:26:12.89:353,13,0	1/1:7,6:13:1.71:233,2,0	1/1:3,8:11:21.06:232,21,0	1/1:6,22:28:60.11:663,60,0	1/1:8,6:14:29.44:304,29,0	1/1:10,16:26:45.12:498,45,0	1/1:10,25:35:63.17:697,63,0	0/1:2,10:12:8:148,0,8
chr10	31315456	.	AT	A	22443.75	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=9.314;DP=729;FS=1.481;HRun=1;HaplotypeScore=80.3861;InbreedingCoeff=0.9996;MQ=71.64;MQ0=0;MQRankSum=-7.494;QD=39.17;ReadPosRankSum=3.616;VQSLOD=5.5270;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,50:51:99:1910,138,0	1/1:0,10:10:30.07:399,30,0	0/0:26,0:26:78.10:0,78,1163	0/0:25,0:25:73.10:0,73,1125	1/1:0,30:30:84.24:1153,84,0	1/1:0,23:23:63.18:860,63,0	1/1:0,34:34:99:1383,99,0	1/1:0,42:42:99:1759,126,0	0/0:21,0:21:63.17:0,63,959	0/0:31,0:31:90.31:0,90,1439	0/0:24,0:24:72.25:0,72,1141	1/1:0,28:28:81.27:1133,81,0	1/1:0,25:25:69.23:960,69,0	1/1:0,14:14:42.14:583,42,0	0/0:29,0:29:87.30:0,87,1388	1/1:0,22:22:60.20:839,60,0	1/1:0,34:34:93.31:1300,93,0	1/1:0,28:28:78.26:1091,78,0	1/1:0,15:15:45.13:608,45,0	1/1:0,28:28:84.28:1175,84,0	1/1:0,38:38:99:1469,105,0	1/1:0,24:24:66.22:923,66,0	1/1:0,16:16:45.02:629,45,0	1/1:0,21:21:57.19:797,57,0	1/1:0,25:25:66.22:923,66,0	1/1:1,24:25:27.27:957,27,0	1/1:0,29:29:81.27:1133,81,0	1/1:0,11:11:33.11:461,33,0
chr10	31315558	.	C	CTGTTTGTT	31395.04	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-5.675;DP=715;FS=0.700;HRun=0;HaplotypeScore=157.2722;InbreedingCoeff=0.9690;MQ=62.71;MQ0=0;MQRankSum=-13.815;QD=63.55;ReadPosRankSum=-3.342;VQSLOD=3.7510;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:38,21:58:99:3977,126,0	1/1:4,13:17:39.10:1561,39,0	0/0:27,0:26:45.54:0,46,851	0/0:36,0:30:53.59:0,54,990	1/1:2,26:30:48.12:1466,48,0	1/1:13,6:18:54.18:1626,54,0	1/1:18,10:28:75.23:2116,75,0	1/1:11,21:49:99:3265,114,0	0/0:16,0:16:48.14:0,48,1086	1/1:4,22:28:63.21:2234,63,0	1/1:2,17:22:39.13:1480,39,0	1/1:2,19:23:39.13:1671,39,0	1/1:4,9:17:24.08:1021,24,0	1/1:2,17:21:30.10:1286,30,0	0/0:26,0:26:69.24:0,69,1643	1/1:2,13:16:21.54:901,22,0	1/1:5,18:27:30.10:1285,30,0	1/1:5,13:22:21.03:718,21,0	0/0:25,0:25:51.16:0,51,1032	0/0:32,0:32:90.31:0,90,2072	0/0:22,0:22:57.15:0,57,1292	1/1:5,17:28:42.04:1208,42,0	1/1:1,17:23:30.89:1066,31,0	1/1:13,2:15:24.01:473,24,0	1/1:11,14:25:69.21:2250,69,0	1/1:4,18:23:57.16:1698,57,0	0/0:37,0:37:99:0,108,2669	1/1:2,0:2:3.01:92,3,0
chr10	31315565	.	T	TTTG	9921.73	PASS	AB=0.962;AC=25;AF=0.446;AN=56;BaseQRankSum=10.576;DP=699;FS=7.087;HRun=0;HaplotypeScore=169.6332;InbreedingCoeff=-0.1467;MQ=63.39;MQ0=2;MQRankSum=-14.380;QD=21.20;ReadPosRankSum=7.762;VQSLOD=3.7765;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:48,8:55:99:1368,0,209	1/1:15,0:15:9.74:479,10,0	0/0:28,0:25:50.80:0,51,844	0/0:40,0:32:72.57:0,73,1114	0/1:29,0:29:99:494,0,127	0/1:17,3:19:62.93:510,0,63	0/1:24,4:28:99:884,0,129	0/1:44,0:44:99:843,0,383	0/0:17,0:17:51.13:0,51,789	0/1:26,0:26:7.33:781,0,7	0/1:21,0:21:60.96:450,0,61	1/1:21,0:21:1.05:503,1,0	0/1:17,1:18:17.24:271,0,17	1/1:18,0:18:30.10:419,30,0	0/0:30,0:30:87.26:0,87,1367	0/1:14,0:14:16.91:269,0,17	1/1:24,1:25:10.17:393,10,0	0/1:23,0:23:74.24:191,0,74	0/0:22,0:22:57.19:0,57,942	0/0:34,0:34:96.33:0,96,1598	0/0:20,0:20:60.19:0,60,987	0/1:27,0:27:99:324,0,160	0/1:24,0:24:89.03:290,0,89	0/1:14,1:15:99:129,0,140	0/1:23,2:25:49.18:798,0,49	0/1:17,0:17:99:456,0,133	0/0:40,0:40:99:0,117,1929	1/1:0,2:2:3.01:69,3,0
chr10	31318502	.	AT	A	8881.14	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=7.449;DP=582;FS=7.241;HRun=7;HaplotypeScore=132.8408;InbreedingCoeff=0.9957;MQ=75.09;MQ0=2;MQRankSum=-4.836;QD=24.47;ReadPosRankSum=2.967;VQSLOD=3.4506;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,23:25:60.01:586,60,0	1/1:1,12:13:30.06:306,30,0	0/0:23,0:23:60.16:0,60,717	0/0:20,0:18:41.99:0,42,469	1/1:3,16:19:45.10:456,45,0	1/1:2,21:23:57.13:581,57,0	1/1:2,14:16:35.56:345,36,0	1/1:5,27:32:78.08:770,78,0	0/0:18,0:18:54.17:0,54,679	0/0:26,0:26:66.20:0,66,837	0/0:23,0:23:57.16:0,57,699	1/1:5,20:25:66.11:659,66,0	1/1:3,9:12:27.05:269,27,0	1/1:2,24:26:57.12:580,57,0	0/0:13,0:13:36.12:0,36,453	1/1:4,11:15:14.28:336,14,0	1/1:0,23:23:54.12:548,54,0	1/1:1,23:24:69.16:704,69,0	0/0:26,0:26:63.16:0,63,771	0/0:27,0:27:75.23:0,75,930	0/0:20,0:20:45.10:0,45,567	1/1:4,17:21:45.10:459,45,0	1/1:1,18:19:48.10:483,48,0	1/1:1,19:20:41.99:428,42,0	1/1:4,17:21:54.12:551,54,0	1/1:2,20:22:63.13:637,63,0	0/0:23,0:23:63.11:0,63,757	1/1:1,6:7:18.04:184,18,0
chr10	31318535	.	C	CGT	7878.61	PASS	AB=0.758;AC=40;AF=0.741;AN=54;BaseQRankSum=5.334;DP=610;FS=2.345;HRun=0;HaplotypeScore=199.0085;InbreedingCoeff=0.4074;MQ=56.19;MQ0=6;MQRankSum=-3.089;QD=14.75;ReadPosRankSum=-2.863;VQSLOD=4.4570;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,16:28:30.08:441,30,0	1/1:4,0:13:24.01:232,24,0	0/0:22,0:12:8.93:0,9,65	0/1:23,0:13:22.19:22,0,29	1/1:7,13:20:18.06:288,18,0	1/1:6,1:19:11.95:105,12,0	1/1:9,3:25:27.03:315,27,0	1/1:24,9:33:19.67:747,20,0	0/0:20,0:20:39.12:0,39,466	1/1:9,1:17:27:256,27,0	./.	1/1:7,24:31:34.23:633,34,0	1/1:2,9:12:30.06:451,30,0	1/1:8,10:18:15.01:205,15,0	0/0:13,0:13:21.06:0,21,252	0/1:8,14:22:74.82:351,0,75	1/1:9,6:28:44.75:526,45,0	0/1:19,13:31:14.86:696,0,15	1/1:15,0:20:29.91:251,30,0	1/1:21,0:29:2.67:12,3,0	0/1:22,0:28:0:0,0,0	1/1:5,5:12:12.04:186,12,0	0/1:16,7:23:6.17:327,0,6	0/1:13,16:30:26.92:545,0,27	1/1:5,15:21:27.09:404,27,0	1/1:8,14:22:15.57:711,16,0	1/1:18,0:27:22.70:173,23,0	0/0:3,1:4:3.01:0,3,36
chr10	31319208	.	CCT	C	10877.40	PASS	AB=0.583;AC=47;AF=0.839;AN=56;BaseQRankSum=4.114;DP=630;FS=0.667;HRun=0;HaplotypeScore=85.0061;InbreedingCoeff=0.8597;MQ=65.75;MQ0=7;MQRankSum=-1.300;QD=21.16;ReadPosRankSum=1.166;VQSLOD=4.7065;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,18:30:47.81:532,48,0	1/1:4,4:8:20.87:210,21,0	0/0:40,0:19:13.51:0,14,107	0/0:45,0:15:11.77:0,12,121	1/1:4,21:26:50.74:538,51,0	1/1:3,12:15:25.08:387,25,0	1/1:6,13:19:27.08:326,27,0	1/1:15,15:30:48.02:520,48,0	0/0:10,0:10:24.08:0,24,382	1/1:6,15:21:48.10:551,48,0	1/1:5,22:27:45.14:543,45,0	1/1:8,10:18:30.09:362,30,0	1/1:7,21:27:45.06:543,45,0	1/1:4,14:18:30.09:362,30,0	0/0:21,0:21:45.14:0,45,687	1/1:3,12:17:41.79:455,42,0	1/1:5,16:21:48.15:578,48,0	0/1:6,14:21:9.74:372,0,10	1/1:8,10:18:26.92:287,27,0	1/1:5,10:15:24.07:289,24,0	1/1:2,17:20:41.70:460,42,0	1/1:5,16:22:38.95:448,39,0	1/1:6,21:27:50.68:615,51,0	1/1:2,19:21:36.11:434,36,0	1/1:5,20:25:54.17:651,54,0	1/1:8,19:26:63.15:728,63,0	1/1:8,15:22:36.10:434,36,0	1/1:7,9:16:21.06:253,21,0
chr10	31320510	.	CTATCT	C	3216.07	PASS	AB=1.000;AC=25;AF=0.446;AN=56;BaseQRankSum=2.687;DP=491;FS=15.072;HRun=0;HaplotypeScore=166.1630;InbreedingCoeff=-0.3825;MQ=46.25;MQ0=17;MQRankSum=-6.737;QD=7.68;ReadPosRankSum=6.130;VQSLOD=1.4967;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:21,0:21:18.25:18,0,172	0/1:8,0:8:34.63:83,0,35	0/0:17,0:7:18.49:0,18,224	0/0:11,0:8:15.98:0,16,204	0/1:27,0:27:97.39:97,0,260	0/1:19,0:19:4.52:5,0,368	1/1:21,0:18:22.89:306,23,0	0/1:26,0:21:99:484,0,102	0/0:12,0:12:26.30:0,26,565	1/1:13,2:15:42.14:696,42,0	1/1:1,8:9:6.02:138,6,0	0/1:13,0:13:37.15:37,0,131	0/1:16,0:14:99:246,0,105	0/1:13,0:12:55.80:110,0,56	0/0:14,0:14:26.62:0,27,288	0/1:22,0:22:28.77:29,0,439	0/1:17,0:16:93.47:127,0,93	0/1:18,0:17:16.52:17,0,570	0/1:14,0:13:99:306,0,120	0/1:17,0:17:40.80:41,0,310	0/0:5,0:4:8.87:0,9,188	0/1:24,0:22:50.62:51,0,259	0/1:18,0:18:52.51:71,0,53	0/0:13,0:13:5.09:0,5,115	0/1:30,0:30:99:156,0,169	0/1:35,0:33:99:341,0,1422	0/1:20,0:20:5.93:6,0,395	0/1:15,0:14:18.12:18,0,313
chr10	31320514	.	CT	C	4134.89	PASS	AB=0.815;AC=27;AF=0.482;AN=56;BaseQRankSum=0.559;DP=479;FS=9.169;HRun=1;HaplotypeScore=139.4012;InbreedingCoeff=-0.2745;MQ=46.21;MQ0=15;MQRankSum=-4.399;QD=10.31;ReadPosRankSum=6.416;VQSLOD=1.0738;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:16,3:19:30.17:30,0,105	1/1:7,0:7:6.02:84,6,0	0/0:21,1:10:12.90:0,13,278	0/0:11,0:9:18.36:0,18,234	0/1:25,3:28:99:157,0,154	0/1:17,1:18:56.45:56,0,209	1/1:5,15:17:22.69:408,23,0	1/1:10,14:19:12.16:484,12,0	0/0:12,0:12:26.30:0,26,375	1/1:3,13:15:37.02:500,37,0	1/1:8,1:9:6.02:68,6,0	0/1:11,1:12:75.79:89,0,76	0/1:5,12:15:55.56:377,0,56	0/1:6,7:12:26.34:224,0,26	0/0:14,0:14:33.88:0,34,311	0/1:19,2:21:59.50:59,0,237	0/1:9,6:14:29.60:189,0,30	0/1:15,2:16:56.20:56,0,304	0/1:3,10:12:57.39:375,0,57	0/1:15,2:17:65.66:66,0,171	0/0:4,0:4:9.03:0,9,140	0/1:15,9:22:99:100,0,142	0/1:14,3:17:33.79:114,0,34	0/0:8,5:13:6.28:0,6,92	0/1:20,7:27:98.36:263,0,98	0/1:22,11:32:99:363,0,803	0/1:20,0:20:19.66:20,0,263	0/1:12,2:13:52.37:52,0,186
chr10	31320515	.	T	TATC	4827.36	PASS	AB=0.782;AC=32;AF=0.571;AN=56;BaseQRankSum=-3.192;DP=483;FS=3.084;HRun=0;HaplotypeScore=151.7996;InbreedingCoeff=0.0160;MQ=50.20;MQ0=14;MQRankSum=-4.647;QD=12.07;ReadPosRankSum=5.952;VQSLOD=3.9852;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:14,5:19:31.87:32,0,81	1/1:3,4:7:5.52:83,6,0	0/0:26,0:12:3.70:0,4,253	0/0:14,0:11:10.94:0,11,225	0/1:16,12:28:61.43:146,0,61	0/1:8,9:17:92.63:93,0,93	1/1:20,0:17:29.43:417,29,0	1/1:23,0:18:33.22:499,33,0	0/0:12,0:12:27.09:0,27,423	1/1:18,0:17:25.96:372,26,0	1/1:9,0:9:0.88:3,1,0	0/1:4,8:12:34.30:173,0,34	1/1:17,0:15:27.21:533,27,0	1/1:14,0:13:14.51:352,15,0	0/0:14,0:14:39.11:0,39,521	0/1:14,6:20:74.74:99,0,75	1/1:13,1:13:11.23:243,11,0	0/1:11,4:15:75.87:76,0,172	0/1:16,0:15:21.12:480,0,21	0/1:15,3:18:20.11:104,0,20	0/0:4,0:4:9.50:0,10,138	1/1:24,0:22:5.35:163,5,0	0/1:11,7:18:14.90:162,0,15	0/0:13,0:13:5.04:0,5,51	1/1:18,9:27:20.60:291,21,0	0/1:31,0:30:99:375,0,532	0/1:13,7:20:38.06:38,0,185	0/1:9,4:12:92.39:95,0,92
chr10	31320556	.	TTTTG	T	664.62	PASS	AB=0.983;AC=22;AF=0.393;AN=56;BaseQRankSum=6.093;DP=474;FS=58.444;HRun=0;HaplotypeScore=101.1441;InbreedingCoeff=-0.5411;MQ=36.49;MQ0=58;MQRankSum=-2.162;QD=1.80;ReadPosRankSum=3.141;VQSLOD=-0.5882;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:21:34.42:34,0,176	0/0:5,0:4:5.92:0,6,38	0/0:12,0:4:10.92:0,11,62	0/0:19,0:7:13.41:0,13,124	0/1:17,2:15:30.34:30,0,62	0/1:8,1:9:10.01:10,0,118	0/1:21,0:18:59.55:60,0,101	0/1:13,0:6:11.86:12,0,44	0/0:28,0:25:50.69:0,51,606	0/1:42,0:40:41.71:42,0,275	0/1:18,0:18:52.21:52,0,59	0/1:9,0:7:27.78:28,0,38	0/1:17,0:16:52.73:53,0,113	0/1:14,1:14:65.57:78,0,66	0/0:14,0:12:25.83:0,26,447	0/1:14,0:14:6.15:6,0,145	0/1:19,0:13:35.92:36,0,94	1/1:11,0:11:1.81:129,2,0	0/0:21,1:18:0.34:0,0,243	0/1:13,0:13:4.84:5,0,190	0/0:3,1:2:3.47:0,3,26	0/1:17,1:17:97.58:98,0,115	0/1:16,0:14:27.98:28,0,111	0/1:10,0:7:15.69:16,0,26	0/1:19,0:16:54.40:54,0,112	0/1:19,0:18:5.20:5,0,154	0/1:25,1:23:7.06:7,0,206	0/1:15,0:10:24.72:32,0,25
chr10	31323176	.	G	GT	24720.88	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=9.878;DP=693;FS=0.848;HRun=1;HaplotypeScore=133.4552;InbreedingCoeff=0.9977;MQ=90.15;MQ0=0;MQRankSum=-8.819;QD=41.83;ReadPosRankSum=3.809;VQSLOD=4.3379;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,46:47:99:1952,132,0	1/1:0,13:13:36.12:546,36,0	0/0:27,0:27:57.12:0,57,882	0/0:25,0:25:56.29:0,56,892	1/1:0,26:26:78.26:1178,78,0	1/1:0,17:17:45.15:676,45,0	1/1:0,21:21:60.16:865,60,0	1/1:1,21:22:63.19:907,63,0	0/0:18,0:18:54.16:0,54,722	1/1:0,27:27:81.26:1186,81,0	1/1:0,16:15:45.15:675,45,0	1/1:0,27:27:75.04:1128,75,0	1/1:4,34:38:99:1483,99,0	1/1:1,27:28:81.27:1221,81,0	0/0:32,0:32:93.29:0,93,1281	1/1:0,26:26:66.22:998,66,0	1/1:0,30:30:84.28:1260,84,0	1/1:0,31:31:90.30:1347,90,0	1/1:0,15:15:45.14:655,45,0	1/1:0,20:20:60.16:875,60,0	1/1:0,23:23:60.20:900,60,0	1/1:0,25:25:75.21:1105,75,0	1/1:0,17:17:48.16:728,48,0	1/1:0,26:26:66.22:987,66,0	1/1:0,22:22:63.21:936,63,0	1/1:1,33:34:99:1486,99,0	1/1:0,33:33:90.31:1360,90,0	1/1:0,7:7:18.06:266,18,0
chr10	31324421	.	ACCCC	A	10593.95	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=1.814;DP=389;FS=24.419;HRun=14;HaplotypeScore=112.8209;InbreedingCoeff=0.8438;MQ=63.13;MQ0=1;MQRankSum=-2.505;QD=30.80;ReadPosRankSum=4.775;VQSLOD=1.9235;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,12:16:35.91:503,36,0	1/1:1,4:5:8.83:127,9,0	0/0:21,0:12:24.08:0,24,464	0/0:15,0:13:22.59:0,23,306	1/1:4,8:12:18.01:249,18,0	1/1:3,17:20:50.96:720,51,0	1/1:3,14:17:39.03:544,39,0	1/1:3,15:18:2.02:591,2,0	0/0:6,0:6:12:0,12,142	1/1:1,9:10:27.09:382,27,0	1/1:1,7:8:14.84:211,15,0	1/1:2,11:13:30.04:424,30,0	1/1:2,4:6:11.84:170,12,0	1/1:2,11:13:27.03:382,27,0	0/0:3,0:3:6.02:0,6,76	1/1:3,2:5:5.95:85,6,0	1/1:6,16:22:38.83:551,39,0	1/1:0,14:14:42.14:594,42,0	1/1:3,5:8:14.70:211,15,0	1/1:2,13:15:33.05:466,33,0	1/1:10,23:33:56.51:787,57,0	1/1:0,10:10:27.09:381,27,0	1/1:2,6:8:20.92:279,21,0	1/1:2,19:21:41.64:594,42,0	1/1:5,9:14:23.72:335,24,0	1/1:3,21:24:62.99:864,63,0	1/1:4,19:23:53.79:763,54,0	1/1:0,9:9:27.09:382,27,0
chr10	31324501	.	ACACACACACACACACATACG	A	3198.38	PASS	AB=1.000;AC=26;AF=0.464;AN=56;BaseQRankSum=-5.108;DP=518;FS=0.487;HRun=0;HaplotypeScore=225.8473;InbreedingCoeff=-0.3400;MQ=48.62;MQ0=24;MQRankSum=1.874;QD=7.92;ReadPosRankSum=-6.036;VQSLOD=0.9896;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:31,0:31:99:285,0,943	0/0:6,0:6:12.04:0,12,698	0/0:8,0:4:11.87:0,12,175	0/0:20,0:12:32.78:0,33,578	1/1:17,0:17:9.95:121,10,0	0/1:26,0:26:90.15:90,0,753	0/1:15,0:14:66.63:140,0,67	0/1:19,0:17:99:175,0,401	0/0:11,0:11:17.70:0,18,980	0/1:26,0:25:99:194,0,1076	0/1:14,0:13:27.79:28,0,93	0/1:17,0:17:99:180,0,674	0/1:6,0:6:36.65:37,0,312	0/1:14,0:14:30.69:31,0,487	0/0:15,0:15:27.09:0,27,1392	0/1:9,0:8:41.59:42,0,441	0/1:28,0:26:99:127,0,1573	0/1:23,0:23:99:211,0,1791	1/1:10,0:10:9.69:194,10,0	1/1:2,19:21:6:182,6,0	0/0:12,42:50:9.01:0,9,154	0/1:13,0:12:85.34:85,0,206	0/1:15,0:13:83.34:83,0,620	0/1:29,0:28:99:217,0,492	0/1:11,0:11:99:102,0,203	0/1:34,0:30:99:235,0,2022	1/1:23,0:23:19.14:573,19,0	0/1:3,0:3:39.66:40,0,258
chr10	31324517	.	ATACG	A	9104.79	PASS	AB=1.000;AC=44;AF=0.815;AN=54;BaseQRankSum=-1.215;DP=485;FS=1.775;HRun=0;HaplotypeScore=105.7861;InbreedingCoeff=0.6415;MQ=61.40;MQ0=14;MQRankSum=-1.051;QD=24.21;ReadPosRankSum=0.466;VQSLOD=4.8464;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:30:47.83:702,48,0	0/1:10,0:10:28.55:152,0,29	0/0:15,0:11:32.94:0,33,579	0/0:23,0:18:53.74:0,54,951	1/1:19,0:19:20.45:334,20,0	1/1:26,0:26:41.15:590,41,0	1/1:12,0:11:15.52:246,16,0	1/1:1,19:20:54.40:738,54,0	0/0:9,0:9:17.46:0,17,248	1/1:0,24:24:60.12:860,60,0	1/1:0,10:10:3.01:34,3,0	1/1:16,0:16:16.22:412,16,0	1/1:8,0:8:21.54:339,22,0	1/1:12,0:12:21.06:309,21,0	0/0:16,0:16:32.32:0,32,547	0/1:12,0:11:24.34:178,0,24	1/1:22,0:20:19.84:391,20,0	1/1:23,0:23:25.72:644,26,0	1/1:0,8:8:24.06:337,24,0	1/1:19,0:19:6.02:72,6,0	./.	1/1:13,0:13:24.08:388,24,0	1/1:12,0:11:7.82:112,8,0	1/1:27,0:26:12.13:442,12,0	1/1:10,0:10:24.08:379,24,0	1/1:27,0:25:5.83:862,6,0	1/1:13,0:13:24.71:467,25,0	1/1:3,0:3:8.98:115,9,0
chr10	31325325	.	AACTGTAATTTTGCT	A	38570.04	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=10.752;DP=616;FS=7.033;HRun=0;HaplotypeScore=270.1625;InbreedingCoeff=0.9848;MQ=51.83;MQ0=2;MQRankSum=-12.296;QD=76.08;ReadPosRankSum=3.070;VQSLOD=3.2310;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,27:31:45.15:1869,45,0	1/1:1,9:10:27.05:1020,27,0	0/0:19,0:10:30.08:0,30,866	0/0:16,0:12:33.10:0,33,951	1/1:1,13:14:24.08:1000,24,0	1/1:1,19:20:42.14:1750,42,0	1/1:4,9:13:18.06:707,18,0	1/1:5,17:22:50.94:1279,51,0	0/0:35,0:35:99:0,102,6840	1/1:1,20:21:50.82:1924,51,0	1/1:0,18:18:39.09:1456,39,0	1/1:1,30:31:65.65:2745,66,0	1/1:6,21:27:54.18:2250,54,0	1/1:4,31:35:81.28:3371,81,0	0/0:39,0:39:99:0,117,7571	1/1:2,27:29:54.19:2250,54,0	1/1:4,24:28:39.13:1625,39,0	1/1:0,11:11:24.08:996,24,0	1/1:3,15:17:44.99:1079,45,0	1/1:3,26:29:45.15:1871,45,0	1/1:1,14:15:16.13:559,16,0	1/1:5,16:21:39.13:1625,39,0	1/1:0,13:13:17.85:750,18,0	1/1:2,16:18:15.05:625,15,0	1/1:0,23:23:57.20:2375,57,0	1/1:1,25:26:72.16:2692,72,0	1/1:1,21:22:45.15:1876,45,0	1/1:3,9:12:21.07:875,21,0
chr10	31329799	.	AG	A	4186.39	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=14.973;DP=640;FS=2.327;HRun=1;HaplotypeScore=69.2555;InbreedingCoeff=0.9956;MQ=84.49;MQ0=0;MQRankSum=-1.322;QD=39.13;ReadPosRankSum=2.097;VQSLOD=4.4472;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:63.21:0,63,1007	0/0:16,0:16:48.15:0,48,744	0/0:24,0:24:61.84:0,62,954	0/0:16,0:16:45.09:0,45,662	0/0:43,0:43:99:0,129,2028	0/0:22,0:22:66.23:0,66,1055	0/0:23,0:23:66.22:0,66,1045	0/0:30,0:30:90.31:0,90,1420	0/0:20,0:20:57.19:0,57,909	0/0:31,0:31:93.32:0,93,1478	0/0:19,0:19:57.19:0,57,901	0/0:16,0:16:48.16:0,48,767	0/0:17,0:17:51.17:0,51,814	0/0:18,0:18:54.17:0,54,830	0/0:23,0:23:69.24:0,69,1103	0/0:24,0:24:72.24:0,72,1139	0/0:23,0:23:69.24:0,69,1103	0/0:29,0:29:84.26:0,84,1293	1/1:0,20:20:57.16:777,57,0	1/1:0,42:42:99:1740,126,0	1/1:0,21:21:51.17:713,51,0	0/0:24,0:24:72.22:0,72,1105	0/0:21,0:21:60.20:0,60,939	0/0:15,0:15:45.15:0,45,719	0/0:27,0:27:81.25:0,81,1250	0/0:26,0:26:75.26:0,75,1188	1/1:1,23:24:69.23:955,69,0	0/0:5,0:5:15.05:0,15,236
chr10	31330328	.	CA	C	2756.35	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=10.092;DP=569;FS=9.194;HRun=3;HaplotypeScore=69.1435;InbreedingCoeff=0.9970;MQ=80.39;MQ0=0;MQRankSum=-1.500;QD=28.71;ReadPosRankSum=-0.313;VQSLOD=2.2570;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:80.93:0,81,1058	0/0:7,0:7:18.06:0,18,258	0/0:33,0:28:61.04:0,61,792	0/0:33,0:29:47.32:0,47,687	0/0:24,0:24:69.23:0,69,980	0/0:11,0:11:33.08:0,33,423	0/0:15,0:15:42.11:0,42,551	0/0:21,0:21:63.14:0,63,789	0/0:20,0:20:60.16:0,60,808	0/0:16,0:16:45.13:0,45,605	0/0:21,0:21:54.16:0,54,754	0/0:22,0:22:63.16:0,63,829	0/0:13,0:13:36.10:0,36,497	0/0:17,0:17:51.15:0,51,695	0/0:22,0:22:66.22:0,66,947	0/0:19,0:19:54.16:0,54,739	0/0:30,0:30:85.94:0,86,1067	0/0:31,0:31:87.23:0,87,1208	1/1:1,24:25:75.04:828,75,0	1/1:0,16:16:39.08:461,39,0	1/1:1,31:32:68.18:852,68,0	0/0:14,0:14:34.75:0,35,509	0/0:17,0:17:47.61:0,48,675	0/0:18,0:17:51.15:0,51,713	0/0:9,0:9:27.09:0,27,380	0/0:21,0:21:63.20:0,63,880	1/1:0,23:23:63.20:777,63,0	0/0:9,0:9:27.06:0,27,351
chr10	31331198	.	ATTGTGTGTGTGTGTATG	A	1309.99	PASS	AB=1.000;AC=10;AF=0.179;AN=56;BaseQRankSum=6.052;DP=619;FS=65.176;HRun=0;HaplotypeScore=246.6574;InbreedingCoeff=0.6841;MQ=67.43;MQ0=48;MQRankSum=-3.162;QD=11.70;ReadPosRankSum=-0.364;VQSLOD=0.1041;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:65.23:0,65,1524	0/0:3,0:3:8.88:0,9,76	0/0:52,0:21:58.04:0,58,1063	0/0:52,0:24:40.02:0,40,813	0/0:17,0:17:41.36:0,41,478	0/1:17,0:17:48.93:49,0,390	0/0:25,0:25:47.59:0,48,514	0/0:21,0:21:57.76:0,58,771	0/0:25,0:25:66.23:0,66,3514	0/0:23,0:23:35.27:0,35,657	0/0:11,0:11:20.99:0,21,266	0/0:21,0:21:9.97:0,10,122	0/0:21,0:21:62.17:0,62,968	0/0:19,0:19:50.50:0,51,818	0/0:34,0:34:96.21:0,96,3608	0/0:21,0:21:14.74:0,15,227	0/0:21,0:21:60.13:0,60,1164	0/0:19,0:18:53.04:0,53,1177	1/1:12,0:10:18.06:275,18,0	1/1:4,17:19:9.03:413,9,0	1/1:2,0:13:15.05:263,15,0	0/0:25,0:25:35.86:0,36,387	0/1:19,0:18:17.83:18,0,83	0/0:27,0:27:50.54:0,51,898	0/0:15,0:14:35.74:0,36,541	0/0:26,0:26:73.52:0,74,952	1/1:9,13:16:9.03:451,9,0	0/0:4,0:4:9.03:0,9,207
chr10	31331199	.	T	TG	315.37	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=4.720;DP=621;FS=34.094;HRun=0;HaplotypeScore=117.7443;InbreedingCoeff=0.8336;MQ=64.80;MQ0=49;MQRankSum=-3.668;QD=4.32;ReadPosRankSum=-0.030;VQSLOD=1.1756;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:65.20:0,65,823	0/0:3,0:3:9.03:0,9,120	0/0:52,0:21:59.97:0,60,756	0/0:49,0:21:34.18:0,34,584	0/0:18,0:18:42.05:0,42,508	0/0:15,0:17:45.51:0,46,560	0/0:24,0:25:59.74:0,60,720	0/0:20,0:20:60.07:0,60,731	0/0:27,0:27:68.02:0,68,907	0/0:22,0:23:54.22:0,54,787	0/0:12,0:12:20.99:0,21,240	0/0:20,0:20:9.03:0,9,121	0/0:21,0:21:63.21:0,63,838	0/0:19,0:19:51.09:0,51,624	0/0:34,0:34:96.32:0,96,1318	0/0:24,0:24:15.01:0,15,164	0/0:21,0:21:56.99:0,57,683	0/0:19,0:18:48.83:0,49,664	1/1:0,10:8:18.06:237,18,0	1/1:19,4:19:2.66:6,3,0	1/1:20,1:14:15.05:191,15,0	0/0:25,0:25:35.86:0,36,353	0/0:20,0:19:18.01:0,18,196	0/0:28,0:28:51.02:0,51,665	0/0:15,0:14:36.11:0,36,466	0/0:26,0:26:74.39:0,74,938	1/1:13,6:13:2.66:6,3,0	0/0:4,0:4:9.03:0,9,121
chr10	31331201	.	GTGTGTGTGTGTA	G	4101.93	PASS	AB=0.996;AC=35;AF=0.625;AN=56;BaseQRankSum=-1.998;DP=621;FS=20.383;HRun=0;HaplotypeScore=187.0099;InbreedingCoeff=0.1540;MQ=61.55;MQ0=49;MQRankSum=-1.303;QD=9.41;ReadPosRankSum=-0.525;VQSLOD=1.4549;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:27:99:181,0,535	1/1:3,0:3:5.96:44,6,0	0/0:50,0:19:30.73:0,31,335	0/0:47,0:19:32.20:0,32,250	1/1:17,0:17:9.01:178,9,0	1/1:17,0:17:36.01:464,36,0	1/1:24,1:25:47.22:512,47,0	0/1:20,0:20:28.14:276,0,28	0/0:30,0:30:69.12:0,69,2462	1/1:21,0:21:24.92:239,25,0	1/1:14,0:14:5.74:31,6,0	0/0:20,0:20:0.47:0,0,1	0/1:21,0:21:88.29:203,0,88	0/1:19,0:19:21.83:164,0,22	0/0:34,0:34:31.21:0,31,1550	1/1:23,0:23:8.76:72,9,0	0/1:22,0:22:89.35:89,0,118	0/1:19,0:18:99:126,0,211	1/1:10,0:8:8.40:47,8,0	1/1:23,0:19:9.03:252,9,0	1/1:21,0:14:8.98:72,9,0	1/1:29,0:29:2.68:11,3,0	1/1:3,17:19:9.03:324,9,0	0/1:27,1:28:43.09:151,0,43	0/1:14,0:13:22.43:103,0,22	0/1:24,0:24:14.68:313,0,15	1/1:19,0:13:9.03:252,9,0	0/0:4,0:4:3.01:0,3,39
chr10	31331203	.	GTGTGTGTGTA	G	5188.10	PASS	AB=1.000;AC=42;AF=0.750;AN=56;BaseQRankSum=-0.681;DP=614;FS=2.324;HRun=0;HaplotypeScore=165.2495;InbreedingCoeff=0.6128;MQ=61.68;MQ0=49;MQRankSum=-0.768;QD=12.12;ReadPosRankSum=0.569;VQSLOD=4.0931;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:29:99:172,0,512	1/1:3,0:3:5.96:44,6,0	0/0:50,0:19:30.73:0,31,334	0/0:47,0:19:32.20:0,32,250	1/1:17,0:17:26.96:221,27,0	1/1:15,0:15:35.98:388,36,0	1/1:25,0:25:47.79:448,48,0	1/1:20,0:20:44.72:367,45,0	0/0:31,0:31:72.13:0,72,2157	1/1:7,12:19:35.59:274,36,0	1/1:3,10:13:5.95:75,6,0	0/0:20,0:20:0.47:0,0,1	1/1:21,0:21:52.13:398,52,0	1/1:19,0:19:35.94:293,36,0	0/0:34,0:34:31.20:0,31,1175	1/1:23,1:24:9.29:169,9,0	1/1:21,0:21:45.90:372,46,0	0/1:19,0:18:99:262,0,122	1/1:9,0:7:8.40:47,8,0	1/1:23,0:19:9.03:210,9,0	1/1:20,0:13:8.98:72,9,0	1/1:29,0:29:3.01:37,3,0	1/1:18,0:17:9.50:226,10,0	1/1:27,0:27:35.49:269,35,0	1/1:14,0:13:18.42:147,18,0	1/1:24,0:24:40.79:487,41,0	1/1:19,0:13:9.03:210,9,0	0/0:4,0:4:2.92:0,3,17
chr10	31331205	.	GTGTGTGTA	G	5663.67	PASS	AB=1.000;AC=44;AF=0.786;AN=56;BaseQRankSum=-0.668;DP=612;FS=3.024;HRun=0;HaplotypeScore=147.1243;InbreedingCoeff=0.5875;MQ=58.35;MQ0=48;MQRankSum=-2.245;QD=13.08;ReadPosRankSum=0.448;VQSLOD=4.0775;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:34,0:34:99:198,0,243	1/1:3,0:3:5.96:44,6,0	0/0:49,0:18:30.65:0,31,334	0/0:44,0:16:32.20:0,32,251	1/1:17,1:18:26.43:220,26,0	1/1:15,0:15:35.98:359,36,0	1/1:25,0:25:48.11:421,48,0	1/1:21,0:20:47.65:386,48,0	0/0:31,0:31:75.14:0,75,1796	1/1:18,0:18:35.59:274,36,0	1/1:13,0:13:5.94:43,6,0	0/0:3,17:20:0.47:0,0,1	1/1:22,0:22:59.15:571,59,0	1/1:17,0:17:35.94:293,36,0	0/0:35,0:35:31.16:0,31,819	1/1:2,23:25:9.50:226,10,0	1/1:22,0:22:48.71:384,49,0	0/1:18,0:17:47.99:283,0,48	1/1:8,0:6:8.40:47,8,0	1/1:22,0:19:9.03:168,9,0	1/1:19,0:13:8.98:72,9,0	1/1:3,26:29:3.01:81,3,0	1/1:18,0:17:9.50:184,10,0	1/1:26,2:28:38.92:389,39,0	1/1:13,0:12:20.95:172,21,0	1/1:20,3:23:59.83:660,60,0	1/1:19,0:13:9.03:168,9,0	1/1:3,0:3:2.98:21,3,0
chr10	31331213	.	ATGTG	A	563.07	PASS	AB=1.000;AC=24;AF=0.462;AN=52;BaseQRankSum=5.940;DP=657;FS=0.000;HRun=0;HaplotypeScore=145.5712;InbreedingCoeff=0.2150;MQ=54.23;MQ0=50;MQRankSum=-2.161;QD=1.47;ReadPosRankSum=4.005;VQSLOD=2.1282;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:36,0:36:13.72:46,0,14	1/1:5,0:5:0.88:2,1,0	./.	./.	0/1:20,0:20:0.17:0,0,0	0/1:19,0:19:31.58:32,0,37	0/1:31,0:31:13.87:14,0,60	0/0:23,0:21:13.10:0,13,83	0/0:30,0:32:36.34:0,36,674	0/1:16,0:16:2.94:10,0,3	0/1:12,0:11:0.01:0,0,0	0/0:18,0:18:0:0,0,0	0/1:22,0:22:16.89:17,0,39	0/0:20,0:20:0.19:0,0,1	1/1:26,12:38:7.77:192,8,0	1/1:24,0:24:8.39:75,8,0	0/0:25,0:25:0.35:0,0,1	0/0:21,0:20:5.26:0,5,48	0/0:9,0:6:0.47:0,0,1	1/1:22,0:20:8.85:70,9,0	0/0:22,0:18:0.47:0,0,1	1/1:27,0:27:3:25,3,0	1/1:20,0:19:9.47:80,9,0	0/1:34,0:34:18.45:18,0,31	0/0:16,0:15:5.46:0,5,46	1/1:35,0:35:9.26:76,9,0	1/1:21,0:15:8.44:40,8,0	0/0:4,0:4:0:0,0,0
chr10	31331222	.	T	TGTGT	599.22	PASS	AB=1.000;AC=29;AF=0.580;AN=50;BaseQRankSum=-6.073;DP=675;FS=7.218;HRun=0;HaplotypeScore=149.9266;InbreedingCoeff=0.3874;MQ=51.35;MQ0=50;MQRankSum=2.819;QD=1.59;ReadPosRankSum=-6.834;VQSLOD=-0.7067;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:35,0:35:0.21:21,0,0	1/1:4,0:4:5.98:47,6,0	./.	./.	1/1:19,0:19:8.97:71,9,0	0/1:19,0:19:14.44:14,0,28	0/0:34,0:34:5.81:0,6,75	1/1:25,0:22:6.90:29,7,0	0/0:33,0:33:33.29:0,33,406	1/1:20,6:26:12.90:96,13,0	1/1:12,0:11:2.94:18,3,0	0/1:17,0:17:0:0,0,0	0/0:22,0:22:1.68:0,2,6	1/1:19,0:19:5.47:45,5,0	0/1:39,0:38:7.84:8,0,97	0/0:27,0:27:8.69:0,9,79	1/1:25,0:25:3.39:25,3,0	1/1:22,0:21:6.88:60,7,0	./.	0/0:25,0:23:9.01:0,9,84	1/1:27,0:22:0.47:1,0,0	0/0:30,0:30:3:0,3,26	0/0:22,0:21:9.47:0,9,79	1/1:33,0:33:7.02:65,7,0	0/1:17,0:16:0:0,0,0	0/1:32,0:32:39.12:205,0,39	0/0:25,0:19:8.93:0,9,83	1/1:7,0:6:5.45:46,5,0
chr10	31331756	.	G	GA	4558.17	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=10.403;DP=757;FS=1.210;HRun=4;HaplotypeScore=81.9690;InbreedingCoeff=0.9932;MQ=78.32;MQ0=0;MQRankSum=-3.196;QD=35.61;ReadPosRankSum=1.786;VQSLOD=5.1967;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,105,1137	0/0:5,0:5:15.04:0,15,170	0/0:21,0:21:54.13:0,54,595	0/0:24,0:24:52.14:0,52,526	0/0:22,0:22:60.10:0,60,664	0/0:32,0:32:90.23:0,90,1003	0/0:22,0:22:63.13:0,63,686	0/0:25,0:25:72.18:0,72,794	0/0:30,0:30:87.20:0,87,956	0/0:37,0:37:96.26:0,96,1074	0/0:15,0:15:42.12:0,42,476	0/0:37,0:37:99:0,102,1157	0/0:31,0:31:90.26:0,90,1020	0/0:39,0:39:99:0,108,1211	0/0:32,0:32:90.23:0,90,1002	0/0:37,0:37:99:0,108,1207	0/0:30,0:30:84.23:0,84,944	0/0:32,0:32:93.24:0,93,1042	1/1:2,16:18:48.14:639,48,0	1/1:1,12:13:33.11:451,33,0	1/1:4,67:71:99:2608,193,0	0/0:13,0:13:36.10:0,36,408	0/0:20,0:20:51.13:0,51,568	0/0:36,0:36:99:0,105,1140	0/0:16,0:16:48.14:0,48,544	0/0:27,0:27:72.18:0,72,796	1/1:1,25:26:63.21:861,63,0	0/0:7,0:7:18.05:0,18,204
chr10	31334748	.	TG	T	8757.90	PASS	AB=1.000;AC=46;AF=0.852;AN=54;BaseQRankSum=0.308;DP=571;FS=0.979;HRun=12;HaplotypeScore=98.9399;InbreedingCoeff=0.5582;MQ=70.80;MQ0=2;MQRankSum=1.095;QD=16.46;ReadPosRankSum=4.667;VQSLOD=5.2979;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,22:27:56.72:441,57,0	1/1:4,5:9:14.91:116,15,0	0/1:19,0:17:24.73:25,0,104	0/0:6,0:5:2.99:0,3,24	1/1:4,26:29:77.70:603,78,0	1/1:3,20:23:59.77:464,60,0	1/1:3,16:18:38.85:302,39,0	1/1:11,22:32:59.13:455,59,0	0/0:10,0:10:12:0,12,110	1/1:4,18:22:53.78:417,54,0	1/1:5,13:17:32.77:255,33,0	1/1:2,23:25:68.73:533,69,0	1/1:5,20:25:62.68:487,63,0	1/1:3,25:27:74.71:579,75,0	0/1:16,0:16:8.56:9,0,69	1/1:6,23:29:46.36:508,46,0	1/1:6,18:24:50.80:394,51,0	1/1:2,23:25:62.71:482,63,0	0/0:7,0:7:6.95:0,7,34	1/1:8,0:8:2.85:17,3,0	./.	1/1:8,17:25:50.74:394,51,0	1/1:3,21:24:65.69:507,66,0	1/1:6,28:34:80.64:626,81,0	1/1:3,18:21:53.79:417,54,0	1/1:5,25:30:74.71:579,75,0	1/1:11,0:11:2.20:8,2,0	1/1:1,6:7:17.93:139,18,0
chr10	31335341	.	GGTGT	G	16034.62	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=2.272;DP=765;FS=2.755;HRun=0;HaplotypeScore=201.5315;InbreedingCoeff=0.9883;MQ=71.50;MQ0=1;MQRankSum=-8.114;QD=33.27;ReadPosRankSum=3.117;VQSLOD=4.9409;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,40:48:95.73:1353,96,0	1/1:3,6:9:21.02:307,21,0	0/0:41,0:37:81.61:0,82,1735	0/0:50,0:38:76.07:0,76,1575	1/1:4,20:24:35.81:567,36,0	1/1:3,17:20:48.04:745,48,0	1/1:8,10:18:39.12:631,39,0	1/1:9,23:32:63.69:1053,64,0	0/0:28,1:29:33.71:0,34,1695	1/1:8,20:28:66.21:1117,66,0	1/1:3,14:18:11.72:162,12,0	1/1:3,22:25:66.14:1071,66,0	1/1:5,21:26:66.23:1138,66,0	1/1:5,16:21:48.16:818,48,0	0/0:43,0:43:99:0,108,2682	1/1:6,31:38:93.31:1586,93,0	1/1:7,21:27:66.17:1056,66,0	1/1:4,9:13:33.10:536,33,0	0/0:16,0:16:27.09:0,27,517	0/0:14,0:14:39.13:0,39,729	0/0:67,0:67:99:0,157,2932	1/1:7,14:21:35.79:554,36,0	1/1:4,23:27:39.47:678,39,0	1/1:7,23:30:39.03:601,39,0	1/1:4,19:23:30.06:472,30,0	1/1:3,25:28:81.27:1381,81,0	0/0:20,0:20:48.07:0,48,897	1/1:0,5:5:12.04:209,12,0
chr10	31335355	.	T	TG	2758.13	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-13.119;DP=765;FS=3.322;HRun=6;HaplotypeScore=221.7404;InbreedingCoeff=0.9976;MQ=58.51;MQ0=2;MQRankSum=3.020;QD=24.63;ReadPosRankSum=2.621;VQSLOD=0.8133;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:57.26:0,57,383	0/0:10,0:10:23.37:0,23,157	0/0:34,0:28:56.99:0,57,565	0/0:45,0:28:49.67:0,50,463	0/0:26,0:26:37.50:0,38,237	0/0:21,0:21:40.51:0,41,251	0/0:15,0:15:28.86:0,29,162	0/0:30,0:30:72.78:0,73,488	0/0:30,0:30:77.27:0,77,784	0/0:26,0:26:75.11:0,75,449	0/0:20,0:20:23.78:0,24,211	0/0:30,0:30:72.66:0,73,457	0/0:32,0:32:78.61:0,79,506	0/0:23,0:23:49.40:0,49,311	0/0:43,0:43:99:0,120,1209	0/0:42,0:42:99:0,104,628	0/0:27,0:26:60.98:0,61,365	0/0:14,0:14:31.88:0,32,192	1/1:4,14:18:39.04:431,39,0	1/1:3,13:15:31.65:377,32,0	1/1:12,48:60:99:1657,134,0	0/0:17,0:17:29.01:0,29,178	0/0:25,0:25:40.04:0,40,219	0/0:29,0:28:37.75:0,38,248	0/0:20,0:20:26.11:0,26,163	0/0:32,0:32:92.91:0,93,572	1/1:2,16:18:36.12:453,36,0	0/0:12,0:12:35.55:0,36,301
chr10	31335389	.	A	ATG	14986.77	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-4.455;DP=824;FS=5.975;HRun=0;HaplotypeScore=162.0440;InbreedingCoeff=0.9801;MQ=56.65;MQ0=5;MQRankSum=-6.487;QD=27.25;ReadPosRankSum=2.951;VQSLOD=5.7577;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,35:51:75.23:1195,75,0	1/1:2,8:10:26.97:383,27,0	0/0:40,0:18:26.06:0,26,288	0/0:47,0:26:34.97:0,35,395	1/1:7,9:16:21.07:327,21,0	1/1:9,19:30:30.09:464,30,0	1/1:3,16:19:39.13:636,39,0	1/1:14,9:23:48.15:735,48,0	0/0:32,0:32:78.19:0,78,914	1/1:9,27:38:51.82:1273,52,0	1/1:3,19:22:30.10:487,30,0	1/1:10,23:33:53.38:813,53,0	1/1:8,28:36:75.24:1194,75,0	1/1:10,16:27:42.14:660,42,0	0/0:46,0:46:99:0,117,1414	1/1:14,37:51:63.56:1528,64,0	1/1:7,20:27:41.03:641,41,0	1/1:8,14:22:6.10:490,6,0	0/0:20,0:19:33.05:0,33,388	0/0:17,0:16:48.13:0,48,565	0/0:53,0:53:99:0,120,1457	1/1:3,15:19:18.06:294,18,0	1/1:12,8:20:35.82:543,36,0	1/1:8,21:29:30.10:489,30,0	1/1:4,16:20:42.14:684,42,0	1/1:11,26:37:78.26:1250,78,0	0/0:18,0:18:38.88:0,39,458	1/1:2,18:20:57.14:899,57,0
chr10	31337611	.	CG	C	16719.61	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=6.772;DP=621;FS=1.481;HRun=1;HaplotypeScore=92.3084;InbreedingCoeff=0.9901;MQ=54.85;MQ0=6;MQRankSum=-4.547;QD=39.16;ReadPosRankSum=1.562;VQSLOD=5.3220;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,36:37:99:1408,102,0	1/1:1,2:3:8.99:104,9,0	0/0:26,1:16:47.62:0,48,642	0/0:36,0:18:50.53:0,51,752	1/1:3,27:30:81.27:1129,81,0	1/1:4,20:24:69.22:949,69,0	1/1:1,15:16:48.16:669,48,0	1/1:2,10:12:36.12:503,36,0	0/0:17,0:17:51.17:0,51,814	1/1:3,24:27:81.27:1126,81,0	1/1:0,15:15:42.14:585,42,0	1/1:1,32:33:99:1365,99,0	1/1:0,20:20:60.20:839,60,0	1/1:2,16:18:48.09:613,48,0	0/0:23,0:23:69.24:0,69,1102	1/1:0,16:16:45.15:629,45,0	1/1:4,26:30:90.23:1189,90,0	1/1:3,17:20:47.75:671,48,0	0/0:24,0:24:72.20:0,72,1118	0/0:26,0:26:78.27:0,78,1238	0/0:23,0:23:66.21:0,66,1024	1/1:2,21:23:66.22:918,66,0	1/1:2,15:17:51.15:694,51,0	1/1:0,23:23:57.14:775,57,0	1/1:2,25:27:75.25:1045,75,0	1/1:0,26:26:78.26:1090,78,0	0/0:18,0:18:51.16:0,51,791	1/1:0,10:10:30.10:419,30,0
chr10	31337649	.	G	GA	13792.30	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-1.557;DP=693;FS=5.475;HRun=9;HaplotypeScore=104.8456;InbreedingCoeff=0.9642;MQ=60.86;MQ0=11;MQRankSum=-3.510;QD=23.62;ReadPosRankSum=0.729;VQSLOD=4.7826;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,35:43:93.24:1014,93,0	1/1:0,7:7:8.86:99,9,0	0/0:27,0:11:19.09:0,19,131	0/0:30,0:13:11.60:0,12,147	1/1:4,33:37:93.12:974,93,0	1/1:7,19:26:25.65:491,26,0	1/1:4,14:18:42.03:438,42,0	1/1:5,21:26:60.63:663,61,0	0/0:23,0:23:26.79:0,27,461	1/1:4,30:34:93.23:1011,93,0	1/1:3,15:18:33.09:363,33,0	1/1:4,20:24:28.09:534,28,0	1/1:5,17:22:41.96:462,42,0	1/1:3,19:23:50.87:535,51,0	0/0:28,0:28:77.97:0,78,672	1/1:1,19:20:48.13:531,48,0	1/1:5,27:33:42.97:685,43,0	1/1:5,24:29:45.12:498,45,0	1/1:4,22:26:66.11:712,66,0	1/1:4,17:22:55.03:592,55,0	1/1:1,17:18:42.11:465,42,0	1/1:2,19:22:60.08:634,60,0	1/1:3,12:15:33.07:354,33,0	1/1:3,13:16:13:351,13,0	1/1:3,24:27:40.14:642,40,0	1/1:8,21:30:78.02:821,78,0	1/1:3,22:25:48.13:527,48,0	1/1:6,17:23:36.10:398,36,0
chr10	31338009	.	ACT	A	15352.86	PASS	AB=1.000;AC=49;AF=0.875;AN=56;BaseQRankSum=3.870;DP=527;FS=19.123;HRun=0;HaplotypeScore=78.8938;InbreedingCoeff=0.8964;MQ=72.57;MQ0=1;MQRankSum=-2.395;QD=32.32;ReadPosRankSum=3.754;VQSLOD=5.0069;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,28:29:69.15:1062,69,0	1/1:0,8:8:17.97:252,18,0	0/0:16,0:10:19.55:0,20,219	0/1:12,0:12:2.01:2,0,323	1/1:1,24:27:71.61:939,72,0	1/1:0,22:22:63.21:1003,63,0	1/1:0,16:17:42.14:651,42,0	1/1:1,20:23:65.37:825,65,0	0/0:13,0:13:39.10:0,39,688	1/1:0,20:22:63.16:919,63,0	1/1:0,18:18:47.77:639,48,0	1/1:0,13:14:27.09:410,27,0	1/1:1,16:18:45.15:683,45,0	1/1:0,22:23:36.09:540,36,0	0/0:23,0:23:66.10:0,66,1016	1/1:0,20:21:44.89:684,45,0	1/1:0,24:24:60.15:910,60,0	1/1:0,16:17:39.13:604,39,0	1/1:2,1:15:19.56:376,20,0	1/1:0,0:21:56.88:524,57,0	1/1:0,0:18:33.06:336,33,0	1/1:1,17:18:41.57:600,42,0	1/1:0,10:12:23.39:325,23,0	1/1:0,28:28:57.19:904,57,0	1/1:0,19:19:45.15:709,45,0	1/1:0,15:16:45.11:634,45,0	1/1:0,0:23:48.11:500,48,0	1/1:0,10:10:21.07:320,21,0
chr10	31338202	.	G	GT	11513.48	PASS	AB=1.000;AC=49;AF=0.875;AN=56;BaseQRankSum=-5.274;DP=504;FS=10.044;HRun=8;HaplotypeScore=49.8924;InbreedingCoeff=0.8996;MQ=73.30;MQ0=0;MQRankSum=-2.364;QD=25.47;ReadPosRankSum=-0.468;VQSLOD=4.9042;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,29:31:84.08:949,84,0	1/1:0,4:4:12.04:138,12,0	0/0:8,0:8:21.01:0,21,192	0/1:9,0:9:0.79:1,0,47	1/1:1,25:27:75.22:860,75,0	1/1:1,20:21:32.66:615,33,0	1/1:3,14:17:39.12:450,39,0	1/1:5,14:19:42.11:475,42,0	0/0:20,0:20:51.01:0,51,467	1/1:4,15:19:45.13:519,45,0	1/1:0,19:20:60.01:672,60,0	1/1:0,15:15:45.13:519,45,0	1/1:3,10:13:27.08:312,27,0	1/1:1,12:13:33.10:381,33,0	0/0:24,0:24:60.03:0,60,549	1/1:2,9:11:27.08:312,27,0	1/1:4,24:28:41.74:734,42,0	1/1:1,24:25:66.20:762,66,0	1/1:2,0:18:42.76:226,43,0	1/1:1,0:13:34.09:173,34,0	1/1:0,0:6:17.04:87,17,0	1/1:2,8:10:21.05:233,21,0	1/1:0,19:19:51.15:589,51,0	1/1:2,13:15:39.12:450,39,0	1/1:6,27:33:26.25:794,26,0	1/1:4,20:24:35.67:642,36,0	1/1:4,1:34:71.14:380,71,0	1/1:0,8:8:21.06:242,21,0
chr10	31338457	.	TA	T	3189.42	PASS	AB=0.875;AC=41;AF=0.759;AN=54;BaseQRankSum=0.410;DP=321;FS=10.794;HRun=13;HaplotypeScore=46.1166;InbreedingCoeff=0.6342;MQ=78.22;MQ0=2;MQRankSum=0.628;QD=12.81;ReadPosRankSum=4.290;VQSLOD=2.7389;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,19:20:50.69:372,51,0	1/1:0,2:2:5.97:44,6,0	0/0:28,0:14:14.16:0,14,95	0/0:17,0:9:10.46:0,10,60	1/1:3,4:7:11.90:87,12,0	1/1:8,14:23:41.70:283,42,0	1/1:2,5:7:14.89:107,15,0	1/1:5,15:20:15.22:264,15,0	0/0:8,1:9:2.13:0,2,182	0/1:11,2:14:7.94:8,0,231	0/0:4,0:4:12:0,12,107	1/1:0,6:7:16.95:115,17,0	1/1:0,5:5:11.93:88,12,0	1/1:2,8:12:27.94:187,28,0	0/0:11,0:11:23.96:0,24,210	1/1:2,4:6:11.90:85,12,0	1/1:5,27:35:70.53:505,71,0	1/1:6,14:20:3.61:190,4,0	1/1:6,11:17:32.18:225,32,0	0/0:1,1:2:2.74:0,3,12	1/1:0,5:5:11.93:87,12,0	./.	1/1:0,2:2:2.98:22,3,0	1/1:0,3:3:8.95:66,9,0	1/1:2,7:9:23.84:173,24,0	1/1:4,11:15:0.56:165,1,0	1/1:5,14:19:35.78:262,36,0	1/1:0,1:1:2.98:22,3,0
chr10	31338691	.	A	ATTTTT	1929.73	PASS	AB=0.925;AC=31;AF=0.596;AN=52;BaseQRankSum=4.942;DP=187;FS=7.963;HRun=1;HaplotypeScore=82.7006;InbreedingCoeff=0.1715;MQ=65.31;MQ0=0;MQRankSum=-9.267;QD=14.29;ReadPosRankSum=1.168;VQSLOD=-0.5778;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:11:14.24:86,14,0	1/1:2,0:2:2.88:15,3,0	0/0:9,0:9:24.07:0,24,421	0/0:5,0:5:15.05:0,15,292	0/1:7,0:7:14.56:28,0,15	1/1:6,0:6:4.40:45,4,0	1/1:2,0:2:5.72:33,6,0	0/1:24,0:24:99:207,0,119	0/0:13,0:13:30.09:0,30,607	0/1:6,0:5:43.92:84,0,44	1/1:4,0:4:12.01:216,12,0	1/1:2,0:2:5.78:31,6,0	0/1:4,0:4:14.74:30,0,15	0/1:5,0:5:13.97:40,0,14	0/0:19,0:19:57.10:0,57,1100	0/0:1,0:1:3.01:0,3,65	1/1:15,0:15:17.67:187,18,0	1/1:7,0:7:16.88:107,17,0	1/1:1,4:7:21:465,21,0	0/1:3,3:7:15.96:71,0,16	1/1:2,0:2:6:64,6,0	./.	./.	0/0:4,0:4:5.96:0,6,43	0/1:4,0:4:13.58:14,0,19	0/1:5,0:5:2.37:2,0,66	0/1:6,5:11:27.16:334,0,27	1/1:4,0:4:6.79:43,7,0
chr10	31338694	.	T	TATATATATATTTTA	10537.80	PASS	AB=1.000;AC=41;AF=0.732;AN=56;BaseQRankSum=-3.447;DP=208;FS=27.301;HRun=0;HaplotypeScore=64.3764;InbreedingCoeff=0.3310;MQ=67.00;MQ0=0;MQRankSum=-6.546;QD=67.99;ReadPosRankSum=-1.376;VQSLOD=2.5803;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,9:16:9.03:632,9,0	1/1:1,1:4:6.02:258,6,0	0/0:9,0:9:27.05:0,27,746	0/0:6,0:6:15.05:0,15,355	1/1:1,0:6:6.02:94,6,0	1/1:0,2:2:3.01:211,3,0	1/1:2,0:2:6.02:130,6,0	1/1:1,19:31:90.30:4007,90,0	0/0:11,0:11:30.06:0,30,1086	1/1:3,0:3:0.45:49,0,0	0/1:3,0:3:2.52:46,0,3	1/1:0,5:7:6.02:422,6,0	1/1:2,0:8:12.04:184,12,0	1/1:2,0:6:12.03:176,12,0	0/0:20,0:20:60.20:0,60,2247	0/1:2,0:2:17.62:18,0,127	1/1:1,16:19:30.10:2078,30,0	1/1:3,6:10:15.05:763,15,0	0/1:9,0:9:19.64:431,0,20	0/0:7,0:7:8.50:0,8,59	0/1:3,0:3:13.65:15,0,14	1/1:1,0:1:3:27,3,0	1/1:1,0:1:3:27,3,0	1/1:3,0:3:3.01:49,3,0	1/1:1,0:5:6:70,6,0	1/1:0,2:5:12.02:484,12,0	0/1:8,0:8:35.14:262,0,35	1/1:0,0:1:3.01:107,3,0
chr10	31339035	.	AGGACACAAGCCAAGT	A	35988.74	PASS	AB=0.542;AC=35;AF=0.625;AN=56;BaseQRankSum=18.731;DP=690;FS=3.561;HRun=0;HaplotypeScore=307.6404;InbreedingCoeff=0.9179;MQ=71.72;MQ0=0;MQRankSum=-18.144;QD=84.28;ReadPosRankSum=3.114;VQSLOD=4.0129;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,36:39:87.30:3555,87,0	1/1:0,6:6:13.93:673,14,0	0/0:18,0:18:51.18:0,51,3347	0/0:23,0:23:69.24:0,69,3985	1/1:2,15:17:30.10:966,30,0	1/1:1,17:18:39.13:1754,39,0	1/1:12,21:33:42.14:1788,42,0	1/1:8,24:32:72.22:2450,72,0	0/0:26,0:26:78.27:0,78,5506	0/0:32,0:32:96.33:0,96,6560	0/0:11,0:11:33.11:0,33,2252	1/1:1,26:27:63.04:2695,63,0	1/1:3,23:26:60.21:2641,60,0	1/1:4,28:32:66.23:2693,66,0	0/0:41,0:41:99:0,120,8026	0/1:6,33:39:99:3763,0,123	1/1:3,19:22:39.13:1676,39,0	1/1:8,12:20:24.08:1080,24,0	0/0:25,0:25:69.22:0,69,4441	0/0:13,0:13:39.13:0,39,2738	0/0:59,0:59:99:0,178,12314	1/1:0,18:18:48.12:1981,48,0	1/1:1,17:18:48.16:2037,48,0	1/1:7,19:26:27.09:997,27,0	1/1:1,8:9:15.05:555,15,0	1/1:6,29:35:87.23:3471,87,0	0/0:15,0:15:45.15:0,45,3364	1/1:0,10:10:27.09:1215,27,0
chr10	31340554	.	A	ATGTGTGTGTG	12257.35	PASS	AB=0.771;AC=42;AF=0.778;AN=54;BaseQRankSum=-1.237;DP=951;FS=8.572;HRun=0;HaplotypeScore=320.8207;InbreedingCoeff=0.4036;MQ=60.92;MQ0=11;MQRankSum=-7.694;QD=16.15;ReadPosRankSum=-2.070;VQSLOD=2.2232;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:31,8:40:4.70:296,5,0	1/1:10,4:15:8.25:388,8,0	0/0:49,0:31:5.66:0,6,78	0/1:40,0:27:4.12:4,0,95	1/1:23,6:29:4.73:201,5,0	1/1:15,7:24:21.07:817,21,0	1/1:14,4:20:9.50:374,10,0	1/1:36,0:34:44.51:1232,45,0	0/0:40,0:43:66.22:0,66,1783	0/1:19,0:38:10.56:401,0,11	0/1:14,0:28:22.31:22,0,138	./.	1/1:27,9:37:15.04:596,15,0	1/1:25,1:31:7.76:332,8,0	0/0:37,0:40:90.26:0,90,2237	1/1:24,13:40:30.10:1342,30,0	1/1:19,8:29:16.80:670,17,0	1/1:19,8:29:24:851,24,0	1/1:25,0:25:28.63:629,29,0	1/1:20,0:32:14.64:314,15,0	0/1:42,0:63:99:237,0,103	1/1:29,6:39:4.76:259,5,0	0/0:18,6:27:2.39:0,2,4	1/1:39,13:53:8.27:357,8,0	1/1:19,10:31:5.99:299,6,0	1/1:32,5:38:52.08:1758,52,0	1/1:18,0:32:20.73:600,21,0	1/1:2,0:4:6.02:277,6,0
chr10	31341650	.	T	TA	12275.63	PASS	AB=1.000;AC=41;AF=0.732;AN=56;BaseQRankSum=-11.980;DP=666;FS=10.392;HRun=9;HaplotypeScore=58.6290;InbreedingCoeff=0.8958;MQ=75.10;MQ0=0;MQRankSum=0.943;QD=24.16;ReadPosRankSum=1.286;VQSLOD=5.3258;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,23:27:57.15:631,57,0	1/1:0,7:7:18.05:199,18,0	0/0:16,0:16:8.94:0,9,70	0/1:11,0:11:17.07:17,0,69	1/1:4,20:25:65.94:693,66,0	1/1:2,31:33:84.23:929,84,0	1/1:4,24:28:46.37:738,46,0	1/1:7,25:33:78.01:824,78,0	0/0:20,0:20:59.97:0,60,517	1/1:5,25:30:75.20:829,75,0	1/1:4,16:20:18.99:422,19,0	1/1:7,19:26:51.14:563,51,0	1/1:6,22:28:63.14:684,63,0	1/1:1,17:18:42.11:465,42,0	0/0:27,0:27:74.98:0,75,651	1/1:3,26:29:72.06:778,72,0	1/1:4,29:33:31.50:780,31,0	1/1:3,30:34:78.04:841,78,0	0/0:20,0:20:56.97:0,57,492	0/0:26,0:26:56.94:0,57,490	0/0:19,0:19:41.98:0,42,364	1/1:3,16:19:19.07:439,19,0	1/1:7,12:19:39.11:430,39,0	1/1:3,19:23:53.98:578,54,0	1/1:5,14:19:39.11:431,39,0	1/1:8,24:32:49.15:770,49,0	0/0:30,0:30:83.96:0,84,725	1/1:2,11:13:21.94:234,22,0
chr10	31342497	.	CTT	C	4286.89	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=4.040;DP=524;FS=27.467;HRun=16;HaplotypeScore=108.2989;InbreedingCoeff=0.9100;MQ=66.04;MQ0=12;MQRankSum=0.982;QD=12.01;ReadPosRankSum=5.911;VQSLOD=1.7094;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,15:27:34.55:259,35,0	1/1:3,4:8:20.67:156,21,0	0/0:35,0:14:14.74:0,15,128	0/0:27,0:13:14.34:0,14,112	1/1:11,10:23:22.22:224,22,0	1/1:3,12:19:34.88:248,35,0	1/1:8,6:16:23.45:210,23,0	1/1:11,16:30:53.20:424,53,0	0/0:19,0:21:46.45:0,46,424	1/1:11,6:17:27.46:206,27,0	1/1:5,9:20:28.93:250,29,0	1/1:7,4:17:20.07:135,20,0	1/1:6,7:13:14.82:125,15,0	1/1:8,8:17:1.12:162,1,0	0/0:13,0:14:25.09:0,25,307	1/1:5,11:17:2.82:208,3,0	1/1:9,10:20:37.40:278,37,0	1/1:8,10:19:35.55:284,36,0	0/0:17,0:24:49.02:0,49,494	0/0:15,0:18:50.11:0,50,465	0/0:9,0:10:18.04:0,18,191	1/1:6,13:18:23.78:199,24,0	1/1:4,6:11:11.92:141,12,0	1/1:6,6:12:14.73:108,15,0	1/1:4,10:17:25.81:235,26,0	1/1:14,11:26:35.28:325,35,0	0/0:15,0:18:39.58:0,40,359	1/1:3,4:7:14.83:109,15,0
chr10	31343014	.	G	GCCAC	28577.15	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-3.328;DP=703;FS=0.000;HRun=0;HaplotypeScore=118.2184;InbreedingCoeff=0.9726;MQ=93.74;MQ0=1;MQRankSum=-10.116;QD=57.15;ReadPosRankSum=3.208;VQSLOD=6.2250;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,26:36:66.17:1650,66,0	1/1:1,9:10:21.07:544,21,0	0/0:42,0:42:99:0,111,1760	0/0:29,0:29:70:0,70,1158	1/1:5,15:23:45.15:1132,45,0	1/1:3,19:23:57.20:1478,57,0	1/1:3,23:26:66.23:1631,66,0	1/1:10,23:36:87.23:2065,87,0	0/0:26,0:26:72.03:0,72,1192	1/1:8,14:22:45.15:1145,45,0	1/1:2,10:12:24.08:621,24,0	1/1:9,38:47:99:2861,111,0	1/1:8,20:28:66.23:1664,66,0	1/1:7,23:33:75.26:1871,75,0	0/0:19,0:19:54.15:0,54,912	1/1:4,17:24:6.29:1378,6,0	1/1:1,37:40:95.96:2492,96,0	1/1:2,19:21:45.11:1093,45,0	0/0:24,0:24:54.17:0,54,943	0/0:14,0:14:39.13:0,39,701	0/0:34,0:34:96.27:0,96,1609	1/1:4,16:22:45.15:1165,45,0	1/1:5,6:14:26.76:694,27,0	1/1:1,35:36:90.31:2334,90,0	1/1:0,10:11:30.10:779,30,0	1/1:4,23:30:72.23:1782,72,0	0/0:15,0:15:42.14:0,42,755	1/1:1,3:4:9.03:196,9,0
chr10	31343618	.	GAGACTCTGGTCTGTGTCTGATTCAGGGGGCTGAGTCT	G	2103.10	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=7.132;DP=674;FS=0.000;HRun=0;HaplotypeScore=574.4081;InbreedingCoeff=0.8967;MQ=83.74;MQ0=0;MQRankSum=-1.717;QD=27.31;ReadPosRankSum=-0.916;VQSLOD=-0.4855;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,108,12046	0/0:11,0:11:30.10:0,30,2911	0/0:20,0:20:53.87:0,54,2278	0/0:43,0:39:61.92:0,62,2654	0/0:32,0:32:77.93:0,78,9147	0/0:24,0:24:63.22:0,63,7278	0/0:29,0:29:84.29:0,84,9346	0/0:34,0:34:87.27:0,87,4607	0/0:17,0:17:51.16:0,51,6891	0/0:26,0:26:69.24:0,69,6483	0/0:17,0:17:48.16:0,48,5474	0/0:25,0:25:66.14:0,66,7755	0/0:28,0:28:84.25:0,84,10061	0/0:28,0:27:72.25:0,72,10361	0/0:38,0:38:99:0,108,14412	0/0:23,0:23:66.21:0,66,9049	0/0:35,0:35:96.33:0,96,12871	0/0:22,0:22:57.20:0,57,6733	1/1:8,13:21:36.06:558,36,0	1/1:6,10:16:9.03:853,9,0	1/1:14,15:29:3.01:262,3,0	0/0:21,0:21:54.18:0,54,6509	0/0:7,0:7:21.07:0,21,2388	0/0:26,0:26:69.24:0,69,9940	0/0:25,0:25:75.26:0,75,9181	0/0:16,0:16:45.15:0,45,5600	1/1:2,9:11:6.02:569,6,0	0/0:7,0:7:21.07:0,21,2981
chr10	31343824	.	GCACA	G	6949.19	PASS	AB=1.000;AC=48;AF=0.857;AN=56;BaseQRankSum=8.391;DP=573;FS=3.016;HRun=0;HaplotypeScore=164.0393;InbreedingCoeff=0.6103;MQ=53.59;MQ0=13;MQRankSum=-5.920;QD=14.21;ReadPosRankSum=1.213;VQSLOD=4.4627;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:33,0:33:21.07:323,21,0	1/1:11,0:11:18.06:248,18,0	0/0:34,0:6:9.03:0,9,151	0/1:38,0:14:6.31:6,0,349	1/1:19,0:19:18.06:264,18,0	1/1:21,0:21:24.08:340,24,0	1/1:27,0:27:9.03:138,9,0	1/1:6,10:16:27.09:474,27,0	0/0:23,0:23:60.21:0,60,1493	1/1:24,0:24:41.97:678,42,0	1/1:13,0:13:15.05:222,15,0	1/1:15,0:15:21.07:298,21,0	1/1:14,0:14:14.89:223,15,0	1/1:22,0:22:20.91:294,21,0	0/0:27,0:27:54.18:0,54,1025	1/1:16,1:16:15.05:221,15,0	1/1:21,0:21:21.07:298,21,0	1/1:10,6:16:33.11:487,33,0	1/1:12,0:12:6:210,6,0	1/1:19,0:19:26.99:245,27,0	0/1:28,0:27:11.03:56,0,11	1/1:22,0:22:24.08:357,24,0	1/1:9,0:9:12.04:180,12,0	1/1:24,0:24:3.01:41,3,0	1/1:23,0:23:36.12:513,36,0	1/1:28,0:28:38.80:619,39,0	1/1:14,0:13:11.99:108,12,0	1/1:1,2:3:6.02:106,6,0
chr10	31343833	.	CACACGTGT	C	11493.44	PASS	AB=1.000;AC=48;AF=0.857;AN=56;BaseQRankSum=7.514;DP=542;FS=1.306;HRun=0;HaplotypeScore=149.0967;InbreedingCoeff=0.6141;MQ=49.06;MQ0=14;MQRankSum=-6.975;QD=25.32;ReadPosRankSum=2.549;VQSLOD=4.7071;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,27:30:21.07:606,21,0	1/1:1,8:9:18.06:513,18,0	0/0:31,0:3:9.03:0,9,153	0/1:36,0:12:4.57:5,0,355	1/1:1,14:15:18.06:535,18,0	1/1:0,16:18:24.08:681,24,0	1/1:4,23:28:9.66:239,10,0	1/1:14,0:14:27.09:474,27,0	0/0:25,0:25:69.24:0,69,2403	1/1:2,0:24:41.97:790,42,0	1/1:0,0:12:15.05:337,15,0	1/1:1,14:17:21.07:591,21,0	1/1:2,13:14:14.20:433,14,0	1/1:1,0:20:21.12:491,21,0	0/0:32,0:32:45.92:0,46,832	1/1:1,12:13:15.05:448,15,0	1/1:2,14:18:20.84:590,21,0	1/1:9,5:15:36.59:754,37,0	1/1:13,0:13:4.08:318,4,0	1/1:17,0:17:27.09:441,27,0	0/1:27,0:26:11.55:56,0,12	1/1:1,0:17:24.08:526,24,0	1/1:0,8:9:12.04:328,12,0	1/1:5,20:27:3.01:69,3,0	1/1:0,17:18:36.12:1082,36,0	1/1:0,25:26:38.80:884,39,0	1/1:13,0:12:12.03:198,12,0	1/1:2,0:2:6.02:106,6,0
chr10	31343834	.	ACACGTGTGTG	A	8070.22	PASS	AB=1.000;AC=44;AF=0.786;AN=56;BaseQRankSum=9.215;DP=542;FS=1.204;HRun=0;HaplotypeScore=170.3304;InbreedingCoeff=0.4176;MQ=49.04;MQ0=14;MQRankSum=-6.548;QD=19.40;ReadPosRankSum=3.923;VQSLOD=3.5496;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:30:20.63:190,21,0	1/1:10,0:9:17.98:228,18,0	0/0:32,0:3:9.02:0,9,188	0/0:37,0:12:0.87:0,1,362	1/1:15,0:15:18.04:181,18,0	1/1:18,0:18:24.05:357,24,0	1/1:28,0:28:9.40:146,9,0	0/1:14,0:14:89.93:310,0,90	0/0:25,0:25:69.24:0,69,2900	0/1:24,0:24:19.07:699,0,19	1/1:12,0:12:15.05:416,15,0	1/1:17,0:17:21.05:333,21,0	1/1:15,0:14:13.54:132,14,0	1/1:20,0:20:20.91:509,21,0	0/0:32,0:32:45.03:0,45,788	1/1:13,0:12:15.03:150,15,0	1/1:19,0:19:20.49:335,20,0	0/1:16,0:16:26.56:318,0,27	1/1:0,12:12:35.22:706,35,0	1/1:0,16:17:27.09:834,27,0	1/1:3,20:22:5.44:138,5,0	1/1:17,0:17:24.08:528,24,0	1/1:9,0:9:12.03:169,12,0	1/1:27,0:27:3.01:90,3,0	1/1:18,0:18:36.07:357,36,0	0/1:27,0:27:23.42:452,0,23	1/1:1,12:12:14.84:416,15,0	1/1:2,0:2:6.02:75,6,0
chr10	31343837	.	CGTGTGT	C	3923.19	PASS	AB=0.975;AC=44;AF=0.815;AN=54;BaseQRankSum=7.658;DP=553;FS=1.789;HRun=0;HaplotypeScore=166.1085;InbreedingCoeff=0.5186;MQ=48.63;MQ0=14;MQRankSum=-5.025;QD=8.92;ReadPosRankSum=2.057;VQSLOD=2.6784;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:30:16.82:115,17,0	1/1:11,0:10:17.59:143,18,0	0/0:33,0:3:3.01:0,3,44	0/0:39,0:12:3.01:0,3,42	1/1:15,0:15:17.72:116,18,0	1/1:18,0:18:23.57:216,24,0	1/1:28,0:28:9.38:81,9,0	0/0:14,0:14:6.02:0,6,67	0/0:23,0:24:57.14:0,57,1537	1/1:24,0:24:12.01:205,12,0	1/1:13,0:13:15.05:230,15,0	1/1:18,0:18:21.23:199,21,0	1/1:15,0:14:11.11:79,11,0	1/1:20,0:20:20.93:292,21,0	1/1:12,18:32:24.56:475,25,0	1/1:13,0:12:14.72:96,15,0	1/1:19,0:19:19.78:190,20,0	0/1:18,0:19:57.07:81,0,57	1/1:13,0:13:12.04:174,12,0	1/1:17,0:17:23.57:305,24,0	1/1:22,0:22:4.55:16,5,0	1/1:17,0:17:23.61:278,24,0	1/1:10,0:10:11.89:98,12,0	1/1:27,0:27:3.01:53,3,0	1/1:18,0:18:35.37:230,35,0	0/1:27,0:27:21.80:96,0,22	1/1:13,0:12:12.03:155,12,0	./.
chr10	31344381	.	AAT	A	15032.41	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=17.120;DP=667;FS=16.545;HRun=0;HaplotypeScore=140.1626;InbreedingCoeff=0.9983;MQ=89.64;MQ0=0;MQRankSum=-3.928;QD=33.86;ReadPosRankSum=6.353;VQSLOD=5.4551;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,35:40:79.33:1285,79,0	1/1:0,13:13:27.56:380,28,0	0/0:26,0:26:69.04:0,69,1109	0/0:27,0:27:71.43:0,71,1284	1/1:1,17:18:42.14:588,42,0	1/1:0,21:21:57.19:798,57,0	1/1:3,24:27:63.21:882,63,0	1/1:0,19:19:51.17:714,51,0	0/0:24,0:24:60.21:0,60,1081	1/1:2,26:28:78.26:1092,78,0	1/1:0,12:12:21.07:294,21,0	1/1:0,30:30:75.04:1050,75,0	1/1:0,28:28:69.23:964,69,0	1/1:0,21:21:51.13:692,51,0	0/0:31,0:31:93.30:0,93,1620	1/1:0,21:21:54.18:756,54,0	1/1:2,32:34:84.28:1176,84,0	1/1:1,26:27:72.24:1008,72,0	0/0:23,0:23:63.21:0,63,1065	0/0:18,0:18:48.16:0,48,856	0/0:49,0:49:99:0,132,2339	1/1:2,13:15:27.09:378,27,0	1/1:2,7:9:21.07:294,21,0	1/1:0,30:30:63.07:882,63,0	1/1:1,12:13:33.11:462,33,0	1/1:0,20:20:57.19:789,57,0	0/0:25,0:25:72.23:0,72,1244	1/1:3,15:18:39.13:546,39,0
chr10	31344814	.	AAC	A	4153.85	PASS	AB=1.000;AC=39;AF=0.696;AN=56;BaseQRankSum=1.105;DP=449;FS=11.224;HRun=0;HaplotypeScore=135.9373;InbreedingCoeff=0.8185;MQ=64.31;MQ0=10;MQRankSum=-2.537;QD=14.84;ReadPosRankSum=0.270;VQSLOD=3.1338;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:19,1:20:8.46:119,8,0	1/1:10,1:11:11.91:155,12,0	0/0:53,0:20:47.68:0,48,578	0/0:48,0:14:22.27:0,22,244	1/1:9,1:10:14.94:186,15,0	1/1:12,1:13:9.03:118,9,0	1/1:9,1:10:18.04:209,18,0	1/1:29,3:32:69.20:839,69,0	0/0:12,0:12:27.07:0,27,434	1/1:20,2:22:63.06:649,63,0	1/1:14,5:19:6.02:77,6,0	1/1:7,2:9:6.02:80,6,0	1/1:12,3:15:14.98:187,15,0	1/1:11,0:11:11.89:160,12,0	0/0:10,0:10:27.09:0,27,456	1/1:10,0:10:9.01:112,9,0	1/1:17,1:18:12.04:145,12,0	1/1:7,0:7:18.04:219,18,0	0/0:12,0:12:30.10:0,30,502	0/1:6,0:6:0:0,0,0	0/0:18,0:18:23.96:0,24,347	1/1:9,1:10:12.04:160,12,0	0/1:4,0:4:0:0,0,0	0/1:13,0:13:0:0,0,0	1/1:16,2:18:11.89:157,12,0	1/1:14,1:15:42.07:448,42,0	0/0:15,0:15:21.04:0,21,357	1/1:7,0:7:12.01:134,12,0
chr10	31344820	.	CACTGTGTG	C	7066.49	PASS	AB=0.500;AC=38;AF=0.704;AN=54;BaseQRankSum=-0.971;DP=426;FS=7.890;HRun=0;HaplotypeScore=145.5000;InbreedingCoeff=0.8410;MQ=62.76;MQ0=14;MQRankSum=-3.000;QD=28.61;ReadPosRankSum=0.147;VQSLOD=3.7357;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:5,12:17:9.50:121,10,0	1/1:3,7:10:12.04:208,12,0	0/0:61,0:18:47.68:0,48,762	0/0:54,0:15:26.45:0,26,377	1/1:4,5:10:15.05:336,15,0	1/1:6,5:12:9.03:208,9,0	1/1:5,5:10:18.49:382,18,0	1/1:16,8:25:27.85:1360,28,0	0/0:12,0:12:30.08:0,30,946	1/1:6,16:22:63.21:1563,63,0	1/1:6,13:19:6.02:131,6,0	1/1:5,2:8:6.02:80,6,0	1/1:7,5:12:15.01:188,15,0	1/1:4,7:11:12.04:160,12,0	0/0:9,0:9:27.09:0,27,824	1/1:3,5:9:9.03:170,9,0	1/1:8,7:15:12.04:249,12,0	1/1:6,2:8:21.05:307,21,0	0/0:13,0:12:33.11:0,33,686	./.	0/0:14,0:14:23.96:0,24,455	1/1:5,3:8:12.04:160,12,0	0/1:0,3:3:0:0,0,0	0/1:0,11:11:0:0,0,0	1/1:5,10:16:12.04:236,12,0	1/1:4,10:14:42.14:1036,42,0	0/0:11,0:11:21.07:0,21,542	1/1:2,5:7:12.04:173,12,0
chr10	31344844	.	GTA	G	421.99	PASS	AB=0.977;AC=20;AF=0.500;AN=40;BaseQRankSum=0.630;DP=298;FS=10.058;HRun=0;HaplotypeScore=124.1698;InbreedingCoeff=0.0729;MQ=36.12;MQ0=8;MQRankSum=-1.819;QD=2.20;ReadPosRankSum=-0.844;VQSLOD=1.5294;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:0:0,0,1	1/1:9,0:9:2.53:18,3,0	./.	0/1:29,0:6:0:0,0,0	0/1:10,1:11:0:0,0,0	1/1:12,1:13:3.01:31,3,0	0/1:5,1:6:9.22:27,0,9	1/1:23,2:24:20.02:139,20,0	0/1:5,0:8:13.06:13,0,20	0/1:18,0:18:15.62:66,0,16	./.	./.	0/1:7,0:7:0.01:0,0,0	0/1:8,0:8:0:0,0,0	0/0:3,0:4:3:0,3,26	1/1:7,0:7:2.92:17,3,0	1/1:12,1:13:2.88:15,3,0	0/1:8,0:8:2.40:33,0,2	0/0:5,0:4:0.24:0,0,29	./.	0/0:6,0:6:0:0,0,0	./.	./.	./.	0/1:16,0:16:0.01:0,0,0	0/1:14,0:14:18.76:164,0,19	0/0:9,0:9:6.01:0,6,67	./.
chr10	31344862	.	ATATATATATG	A	1226.25	PASS	AB=0.980;AC=19;AF=0.396;AN=48;BaseQRankSum=4.080;DP=265;FS=23.513;HRun=0;HaplotypeScore=120.5546;InbreedingCoeff=0.3971;MQ=33.66;MQ0=7;MQRankSum=-3.312;QD=8.46;ReadPosRankSum=2.922;VQSLOD=0.7245;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:15,1:16:0:0,0,1	1/1:6,0:6:2.33:10,2,0	0/0:5,0:3:2.96:0,3,19	0/0:16,0:2:3.43:0,3,19	0/0:10,0:10:0:0,0,1	1/1:14,0:14:2.61:14,3,0	1/1:3,0:3:4.82:31,5,0	0/1:35,0:34:80.33:223,0,80	0/0:6,0:6:12.03:0,12,289	1/1:19,0:19:30.03:484,30,0	0/0:17,1:17:0:0,0,0	./.	0/1:9,0:9:0:0,0,0	0/0:9,0:9:0:0,0,1	0/0:3,0:3:8.98:0,9,184	1/1:7,0:7:2.74:62,3,0	1/1:13,0:13:2.15:59,2,0	1/1:8,0:8:9.56:74,10,0	0/0:2,0:2:3.46:0,3,25	0/0:4,0:4:0:0,0,1	0/0:2,0:2:0:0,0,0	0/0:4,1:5:0:0,0,0	./.	./.	0/0:20,1:21:0:0,0,1	1/1:15,0:15:34.50:391,35,0	0/0:5,0:5:5.99:0,6,62	./.
chr10	31344864	.	ATATATATG	A	1706.26	PASS	AB=0.957;AC=19;AF=0.380;AN=50;BaseQRankSum=2.660;DP=265;FS=21.476;HRun=0;HaplotypeScore=115.0721;InbreedingCoeff=0.3910;MQ=29.89;MQ0=8;MQRankSum=-1.138;QD=12.93;ReadPosRankSum=2.114;VQSLOD=1.1473;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:0:0,0,1	0/0:7,0:7:0.47:0,0,2	0/0:6,0:2:2.98:0,3,21	0/0:14,0:1:2.90:0,3,16	0/0:10,0:10:0:0,0,1	1/1:13,1:14:2.61:12,3,0	1/1:3,0:3:5.81:49,6,0	0/1:33,1:33:37.34:333,0,37	0/0:6,0:6:12.03:0,12,233	1/1:9,11:20:47.79:894,48,0	0/0:11,7:17:0:0,0,0	./.	0/1:8,1:9:0:0,0,0	0/0:9,0:9:0:0,0,1	0/0:3,0:3:3.01:0,3,112	1/1:8,0:8:2.74:37,3,0	1/1:12,0:12:2.44:35,2,0	1/1:6,1:7:9.85:111,10,0	0/0:2,0:2:5.95:0,6,53	0/0:4,0:4:0:0,0,1	0/0:1,0:1:0:0,0,0	1/1:5,1:6:0.20:1,0,0	./.	0/1:4,0:4:0:0,0,0	0/0:20,2:22:0:0,0,1	1/1:15,0:15:35.48:354,35,0	0/0:5,0:5:6.02:0,6,91	./.
chr10	31344866	.	ATATATG	A	2025.30	PASS	AB=0.714;AC=24;AF=0.500;AN=48;BaseQRankSum=0.451;DP=268;FS=18.880;HRun=0;HaplotypeScore=111.0658;InbreedingCoeff=0.4452;MQ=29.56;MQ0=9;MQRankSum=-1.647;QD=11.31;ReadPosRankSum=-0.074;VQSLOD=1.4693;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:9,7:16:0.02:0,0,1	1/1:4,3:7:2.41:18,2,0	./.	0/0:14,0:1:2.90:0,3,16	0/0:4,7:11:0:0,0,0	1/1:6,8:14:3.01:51,3,0	1/1:2,1:3:3.48:34,3,0	1/1:28,7:34:65.11:739,65,0	0/0:6,0:6:10.83:0,11,162	1/1:20,0:20:38.50:487,39,0	0/0:19,0:18:0:0,0,0	./.	0/1:4,5:9:0:0,0,0	0/0:3,6:9:0:0,0,0	0/0:1,0:1:3.01:0,3,86	1/1:4,4:8:2.88:70,3,0	1/1:6,7:13:2.50:67,3,0	1/1:3,2:5:6.98:107,7,0	0/0:2,0:2:3.48:0,3,47	0/0:4,0:4:0:0,0,0	0/0:1,0:1:0:0,0,0	1/1:4,2:6:0.34:1,0,0	./.	0/1:3,1:4:0:0,0,0	0/1:14,9:23:0:0,0,0	1/1:8,8:16:33:567,33,0	0/0:5,0:5:6.02:0,6,101	./.
chr10	31344868	.	ATATG	A	1135.06	PASS	AB=0.967;AC=19;AF=0.475;AN=40;BaseQRankSum=1.333;DP=265;FS=6.713;HRun=0;HaplotypeScore=108.6121;InbreedingCoeff=0.4716;MQ=29.70;MQ0=8;MQRankSum=-1.471;QD=7.28;ReadPosRankSum=0.851;VQSLOD=1.9752;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/1:6,1:7:0.02:0,0,0	./.	0/0:17,0:3:2.22:0,2,29	0/1:11,0:11:0.13:0,0,0	1/1:14,0:14:2.92:17,3,0	0/1:3,0:3:0:0,0,0	1/1:34,0:33:63.43:479,63,0	0/0:6,0:6:10.25:0,10,112	1/1:19,0:19:33.45:371,33,0	./.	./.	./.	0/0:9,0:9:0:0,0,0	0/0:2,0:2:6.01:0,6,85	1/1:8,0:8:3.01:35,3,0	1/1:13,0:13:2.69:32,3,0	1/1:3,0:5:6.85:57,7,0	0/0:2,0:2:2.94:0,3,18	./.	0/0:1,0:1:0:0,0,0	0/0:6,0:6:0.47:0,0,1	./.	0/1:3,0:3:0:0,0,0	0/1:22,1:23:0.14:1,0,0	1/1:16,0:16:24.65:254,25,0	0/0:5,0:5:3.01:0,3,50	./.
chr10	31344870	.	ATG	A	930.25	PASS	AB=0.982;AC=25;AF=0.543;AN=46;BaseQRankSum=0.335;DP=269;FS=9.741;HRun=0;HaplotypeScore=101.0561;InbreedingCoeff=0.1356;MQ=29.29;MQ0=8;MQRankSum=0.209;QD=4.70;ReadPosRankSum=1.474;VQSLOD=1.7364;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:0:0,0,0	1/1:5,0:5:1.52:4,2,0	./.	0/0:18,0:3:3.54:0,4,31	0/1:10,0:10:0:0,0,0	1/1:12,1:13:2.90:16,3,0	0/1:3,0:3:9.91:10,0,12	1/1:29,0:28:70.94:507,71,0	0/1:4,1:5:30.99:31,0,70	0/1:17,0:17:2.46:204,0,2	0/1:17,0:16:0:0,0,0	./.	0/1:9,0:9:0:0,0,0	0/1:8,0:8:0:0,0,0	0/0:2,0:2:6:0,6,55	1/1:7,0:7:2.98:22,3,0	1/1:12,1:13:2.57:19,3,0	1/1:5,0:5:1.30:32,1,0	0/1:2,0:2:12.23:12,0,42	0/1:8,0:8:0:0,0,0	./.	0/1:6,0:6:0:0,0,0	./.	0/1:3,0:3:0:0,0,0	0/1:23,0:23:0:1,0,0	0/1:14,1:15:14.89:178,0,15	0/0:10,0:10:8.66:0,9,102	./.
chr10	31344900	.	A	ATATG	4492.92	PASS	AB=0.676;AC=28;AF=0.560;AN=50;BaseQRankSum=-0.977;DP=367;FS=5.294;HRun=0;HaplotypeScore=122.3443;InbreedingCoeff=0.4188;MQ=28.69;MQ0=13;MQRankSum=-0.788;QD=16.05;ReadPosRankSum=-0.252;VQSLOD=4.3906;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:4,7:11:0:0,0,0	0/1:3,4:7:0:0,0,0	0/0:21,0:4:11.50:0,12,73	0/0:27,0:3:5.52:0,6,65	0/1:7,10:17:0.03:0,0,0	0/1:3,12:15:0:0,0,0	0/0:5,1:6:0.47:0,0,1	1/1:7,42:43:99:1918,105,0	0/0:4,0:4:12.04:0,12,227	1/1:11,0:21:10.27:695,10,0	1/1:6,0:22:0.62:1,1,0	1/1:5,4:10:11.58:149,12,0	1/1:5,9:14:6.46:166,6,0	0/1:4,6:11:0.07:0,0,0	0/0:2,0:2:3.01:0,3,60	0/1:2,10:12:0.02:1,0,0	1/1:3,10:12:8.98:195,9,0	1/1:1,2:3:6.02:149,6,0	0/1:7,0:6:13.10:17,0,13	./.	./.	0/0:1,8:9:0.75:0,1,2	0/1:3,5:8:0.06:0,0,0	./.	0/1:6,21:28:0.14:1,0,0	1/1:4,11:16:40.80:1021,41,0	0/1:7,0:7:11.08:11,0,56	1/1:1,5:6:6.49:168,6,0
chr10	31344926	.	A	ATG	2108.89	PASS	AB=0.830;AC=26;AF=0.520;AN=50;BaseQRankSum=1.993;DP=323;FS=21.446;HRun=0;HaplotypeScore=116.8479;InbreedingCoeff=0.4541;MQ=29.33;MQ0=9;MQRankSum=-3.644;QD=8.34;ReadPosRankSum=1.397;VQSLOD=1.9413;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,5:15:3:28,3,0	0/0:5,2:7:0:0,0,0	0/0:12,0:3:2.99:0,3,23	0/0:16,0:2:0:0,0,0	0/1:14,5:19:0.01:1,0,0	0/1:12,3:15:0:0,0,0	0/0:6,4:10:0:0,0,0	1/1:24,11:27:42.91:709,43,0	0/0:4,0:4:12.03:0,12,142	1/1:11,6:17:44.82:512,45,0	0/1:17,4:21:0.02:1,0,0	1/1:10,2:12:11.97:102,12,0	1/1:10,4:14:8.98:77,9,0	1/1:10,1:11:2.97:21,3,0	0/0:2,0:2:6:0,6,54	1/1:9,4:13:0.47:1,0,0	0/1:9,4:13:8.71:108,0,9	0/0:0,1:1:2.74:0,3,12	0/0:3,0:1:3:0,3,28	./.	./.	1/1:4,4:8:0.47:1,0,0	0/1:10,1:11:0:2,0,0	./.	0/1:20,5:25:0:0,0,0	1/1:15,5:20:51.05:595,51,0	0/0:5,0:5:6.02:0,6,78	1/1:4,0:4:8.99:77,9,0
chr10	31344938	.	ATATATG	A	2954.86	PASS	AB=0.622;AC=29;AF=0.630;AN=46;BaseQRankSum=2.322;DP=299;FS=15.238;HRun=0;HaplotypeScore=122.8852;InbreedingCoeff=0.5253;MQ=38.38;MQ0=6;MQRankSum=-3.300;QD=11.96;ReadPosRankSum=2.697;VQSLOD=1.5298;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,6:15:2.94:69,3,0	./.	1/1:9,0:2:1.25:3,1,0	0/0:10,0:3:5.05:0,5,46	0/1:6,13:19:0.12:0,0,0	0/1:4,11:15:0:0,0,0	0/1:5,5:10:0:0,0,0	1/1:26,1:25:43.10:407,43,0	0/0:5,0:5:15.03:0,15,379	1/1:9,8:16:25.58:606,26,0	0/1:6,15:21:0.04:0,0,1	1/1:2,11:13:11.67:274,12,0	1/1:4,9:13:11.46:241,11,0	1/1:4,6:10:2.76:68,3,0	0/0:2,0:2:6.02:0,6,191	1/1:6,7:13:2.46:42,2,0	1/1:7,5:12:3.05:367,3,0	0/0:1,0:1:2.68:0,3,11	./.	./.	./.	1/1:5,2:7:0.47:1,0,0	0/0:4,9:13:0.13:0,0,1	./.	0/1:12,10:22:0:0,0,0	1/1:8,11:19:47.48:760,47,0	0/0:6,0:6:8.74:0,9,86	1/1:2,3:5:12.04:243,12,0
chr10	31344944	.	GTATATATA	G	2889.66	PASS	AB=0.971;AC=31;AF=0.646;AN=48;BaseQRankSum=1.967;DP=288;FS=0.000;HRun=0;HaplotypeScore=125.3225;InbreedingCoeff=0.5458;MQ=39.49;MQ0=5;MQRankSum=-3.387;QD=13.13;ReadPosRankSum=2.514;VQSLOD=1.8261;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:14,1:15:3.01:56,3,0	./.	1/1:6,0:1:0.47:1,0,0	0/0:7,0:3:5.05:0,5,54	0/1:19,0:19:0.09:0,0,0	0/1:14,0:14:0:0,0,0	0/1:9,1:10:0:0,0,0	1/1:21,4:23:32.30:636,32,0	0/0:5,0:5:12.04:0,12,439	1/1:17,0:16:24.34:457,24,0	0/0:21,1:22:2:0,2,3	1/1:13,0:13:11.98:215,12,0	1/1:13,0:13:11.73:230,12,0	1/1:7,2:9:2.62:63,3,0	0/0:3,0:3:9.03:0,9,328	1/1:11,1:12:2.86:78,3,0	1/1:9,2:11:17.10:348,17,0	1/1:2,0:2:2.98:22,3,0	./.	./.	./.	1/1:6,1:7:0.47:1,0,0	0/0:10,1:11:1.06:0,1,1	0/1:3,0:3:0:0,0,0	0/1:16,1:17:0.01:0,0,0	1/1:16,1:17:32.12:658,32,0	0/0:7,0:7:6.01:0,6,123	1/1:9,1:10:12.04:253,12,0
chr10	31344952	.	A	ATG	1607.48	PASS	AB=0.995;AC=34;AF=0.708;AN=48;BaseQRankSum=0.698;DP=305;FS=0.000;HRun=0;HaplotypeScore=123.4427;InbreedingCoeff=0.2713;MQ=47.52;MQ0=3;MQRankSum=-2.331;QD=5.98;ReadPosRankSum=1.910;VQSLOD=2.9193;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:15:8.94:67,9,0	./.	0/0:5,0:2:0.36:0,0,1	0/0:10,0:4:2.22:0,2,8	1/1:19,0:19:2.98:25,3,0	1/1:16,0:16:8.98:72,9,0	1/1:13,0:13:8.97:75,9,0	0/1:29,1:28:12.30:484,0,12	0/0:6,0:6:18.01:0,18,209	0/1:19,0:18:63.32:151,0,63	0/1:21,0:21:0.02:1,0,0	1/1:14,0:14:11.68:68,12,0	1/1:13,0:13:11.77:103,12,0	1/1:9,0:9:5.74:38,6,0	0/1:5,0:5:2.86:3,0,126	1/1:13,0:13:9:93,9,0	1/1:11,0:11:17.59:107,18,0	1/1:2,0:2:2.98:22,3,0	./.	./.	./.	1/1:8,0:8:3.47:26,3,0	1/1:13,0:13:5.99:51,6,0	1/1:3,1:4:5.99:49,6,0	0/1:16,0:16:0:0,0,0	0/1:18,0:18:36.22:213,0,36	0/0:3,0:3:5.99:0,6,50	1/1:4,6:10:11.78:92,12,0
chr10	31346231	.	GT	G	198.59	PASS	AB=0.909;AC=3;AF=0.054;AN=56;BaseQRankSum=-3.307;DP=643;FS=0.761;HRun=16;HaplotypeScore=177.9407;InbreedingCoeff=0.6009;MQ=56.88;MQ0=3;MQRankSum=4.973;QD=3.82;ReadPosRankSum=3.181;VQSLOD=0.3548;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:18:0,18,113	0/0:13,0:13:20.61:0,21,99	0/0:24,1:12:12.31:0,12,86	0/1:17,2:10:3.84:4,0,18	0/0:37,0:35:52.07:0,52,273	0/0:22,0:21:44.17:0,44,215	0/0:10,0:9:13.55:0,14,64	0/0:31,0:27:44.30:0,44,263	0/0:23,2:26:13.14:0,13,291	0/0:42,0:41:76.58:0,77,385	0/0:28,0:28:39.54:0,40,201	0/0:21,0:21:30.67:0,31,152	0/0:19,0:19:39.60:0,40,216	0/0:17,0:16:24.91:0,25,118	1/1:8,23:31:48.83:293,49,0	0/0:16,0:16:23.04:0,23,113	0/0:20,0:20:17.98:0,18,79	0/0:10,0:8:14.46:0,14,63	0/0:26,0:27:51.90:0,52,344	0/0:26,1:27:37.03:0,37,386	0/0:22,0:22:34.76:0,35,255	0/0:19,0:18:26.43:0,26,150	0/0:27,0:26:17.80:0,18,111	0/0:5,0:5:5.45:0,5,27	0/0:23,0:20:37.49:0,37,201	0/0:49,0:47:98.35:0,98,528	0/0:32,4:36:27.27:0,27,307	0/0:7,0:6:12.98:0,13,65
chr10	31346247	.	T	TA	2646.78	PASS	AB=0.979;AC=24;AF=0.429;AN=56;BaseQRankSum=-1.475;DP=625;FS=117.251;HRun=1;HaplotypeScore=119.7904;InbreedingCoeff=-0.2952;MQ=63.04;MQ0=1;MQRankSum=-8.742;QD=6.08;ReadPosRankSum=4.581;VQSLOD=0.2842;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:13,0:13:59.40:59,0,63	1/1:10,0:10:4.31:118,4,0	0/0:25,0:17:27.54:0,28,330	0/1:21,0:14:0.78:1,0,89	0/1:29,0:27:97.54:126,0,98	0/1:26,0:25:47.73:249,0,48	1/1:13,0:12:4.58:139,5,0	0/1:36,0:33:99:307,0,114	0/0:28,0:28:65.05:0,65,603	0/1:38,1:39:70.47:387,0,70	0/1:22,0:23:62.08:62,0,115	0/1:22,0:22:64.58:127,0,65	0/1:20,0:21:79.64:160,0,80	0/1:20,0:19:68.97:124,0,69	0/0:36,0:36:80.14:0,80,564	0/1:18,0:18:9.32:167,0,9	0/1:14,0:14:5.29:120,0,5	1/1:8,0:7:13.14:101,13,0	0/0:26,0:26:61.13:0,61,509	0/0:20,0:23:53.88:0,54,538	0/0:15,0:15:38.83:0,39,355	0/1:10,7:16:10.51:11,0,75	0/1:24,0:23:46.87:128,0,47	0/1:4,0:4:13.01:13,0,13	0/1:26,0:23:99:133,0,121	0/1:42,0:40:99:232,0,217	0/0:36,0:36:86.52:0,87,766	0/1:7,0:6:18.62:47,0,19
chr10	31346318	.	CAGAAGAATGGATGGTCT	C	28457.81	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=16.999;DP=468;FS=24.936;HRun=0;HaplotypeScore=240.5129;InbreedingCoeff=0.9228;MQ=94.68;MQ0=0;MQRankSum=-15.978;QD=110.73;ReadPosRankSum=6.711;VQSLOD=3.3112;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,6:6:9.03:358,9,0	1/1:1,5:6:9.03:454,9,0	0/0:24,0:24:65.39:0,65,4464	0/0:28,0:28:75.25:0,75,4809	1/1:0,19:19:36.12:1726,36,0	1/1:0,17:17:33.11:1653,33,0	1/1:0,11:11:24.08:1227,24,0	1/1:0,10:10:30.10:1028,30,0	0/0:20,0:20:60.21:0,60,4646	1/1:0,18:18:45.15:1844,45,0	1/1:0,15:15:33.11:1688,33,0	1/1:0,13:13:30.10:1534,30,0	1/1:0,19:19:50.61:2603,51,0	1/1:0,14:14:33.11:1686,33,0	0/0:44,0:44:99:0,126,9812	1/1:1,28:29:72.25:3659,72,0	1/1:0,9:9:18.06:920,18,0	1/1:0,4:4:6.02:307,6,0	0/0:19,0:19:57.20:0,57,3859	0/0:16,0:16:48.16:0,48,3773	0/0:35,0:35:99:0,102,7949	1/1:0,3:3:6.02:307,6,0	1/1:0,11:11:21.04:1073,21,0	1/1:0,6:6:12.04:613,12,0	1/1:0,18:18:48.16:2454,48,0	1/1:0,24:24:66.22:3016,66,0	0/0:25,0:25:75.24:0,75,5964	1/1:0,5:5:6.02:307,6,0
chr10	31347549	.	GC	G	17045.31	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=11.541;DP=711;FS=1.708;HRun=3;HaplotypeScore=71.8241;InbreedingCoeff=0.9994;MQ=74.10;MQ0=0;MQRankSum=-2.312;QD=33.95;ReadPosRankSum=0.606;VQSLOD=5.3419;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,33:33:96.29:1177,96,0	1/1:0,12:12:30.09:372,30,0	0/0:16,0:16:45.13:0,45,624	0/0:13,0:13:39.13:0,39,553	1/1:0,13:13:36.11:446,36,0	1/1:0,11:11:30.09:372,30,0	1/1:0,29:29:84.26:1040,84,0	1/1:2,21:23:63.15:741,63,0	0/0:30,0:30:87.27:0,87,1230	1/1:0,36:36:99:1288,105,0	1/1:0,9:9:27.08:330,27,0	1/1:0,34:34:93.29:1153,93,0	1/1:1,52:53:99:1805,147,0	1/1:0,28:28:81.25:1003,81,0	0/0:33,0:33:99:0,99,1390	1/1:1,34:35:47.08:1035,47,0	1/1:1,34:35:99:1264,102,0	1/1:0,35:35:99:1227,99,0	0/0:19,0:19:57.17:0,57,787	0/0:18,0:18:54.18:0,54,778	0/0:60,0:60:99:0,175,2413	1/1:0,12:12:27.08:333,27,0	1/1:0,15:15:42.13:521,42,0	1/1:0,40:40:99:1339,108,0	1/1:0,15:15:36.11:446,36,0	1/1:0,19:19:57.18:706,57,0	0/0:20,0:20:60.19:0,60,846	1/1:0,15:15:36.11:446,36,0
chr10	31350207	.	T	TGGG	6768.08	PASS	AB=0.583;AC=39;AF=0.696;AN=56;BaseQRankSum=13.376;DP=574;FS=25.905;HRun=1;HaplotypeScore=114.4576;InbreedingCoeff=0.8729;MQ=96.85;MQ0=0;MQRankSum=-8.088;QD=20.51;ReadPosRankSum=-2.789;VQSLOD=0.0708;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,2:20:12.03:205,12,0	1/1:1,2:4:3.01:63,3,0	0/0:29,0:30:83.91:0,84,1187	0/0:32,0:31:84.96:0,85,1298	1/1:2,8:11:11.60:122,12,0	1/1:5,5:13:15.48:217,15,0	1/1:7,14:25:57.23:915,57,0	1/1:6,5:15:26.50:338,27,0	0/0:25,0:25:75.26:0,75,1314	1/1:6,0:17:39.49:266,39,0	0/1:4,0:14:1.33:97,0,1	1/1:7,11:24:21.54:388,22,0	1/1:11,9:22:47.52:763,48,0	1/1:10,13:28:61.55:874,62,0	0/0:33,0:33:90.29:0,90,1559	1/1:3,12:19:26.92:487,27,0	1/1:4,13:22:24.02:426,24,0	1/1:4,5:16:16.33:311,16,0	0/0:20,0:20:60.20:0,60,1020	0/0:18,0:18:54.19:0,54,952	0/0:66,0:66:99:0,187,3171	1/1:2,5:10:9.46:160,9,0	1/1:11,3:15:16.15:198,16,0	1/1:1,5:12:12.51:226,13,0	1/1:4,6:14:12.45:190,12,0	1/1:7,13:26:32.81:423,33,0	0/0:20,0:20:60.19:0,60,1009	1/1:0,2:3:6.02:97,6,0
chr10	31350726	.	GT	G	3758.78	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=13.051;DP=659;FS=0.000;HRun=2;HaplotypeScore=72.5864;InbreedingCoeff=0.9998;MQ=85.36;MQ0=0;MQRankSum=-1.574;QD=35.80;ReadPosRankSum=1.194;VQSLOD=4.1266;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:57:99:0,165,2367	0/0:11,0:11:33.11:0,33,494	0/0:25,0:25:75.23:0,75,1066	0/0:28,0:28:68.96:0,69,987	0/0:16,0:16:42.13:0,42,609	0/0:22,0:22:66.22:0,66,988	0/0:25,0:25:75.25:0,75,1106	0/0:40,0:40:99:0,117,1682	0/0:17,0:17:51.17:0,51,764	0/0:29,0:29:84.28:0,84,1258	0/0:15,0:15:45.10:0,45,621	0/0:15,0:15:45.11:0,45,649	0/0:27,0:27:81.27:0,81,1212	0/0:18,0:18:54.18:0,54,798	0/0:20,0:20:60.18:0,60,861	0/0:22,0:22:66.19:0,66,963	0/0:32,0:32:87.25:0,87,1278	0/0:24,0:24:72.23:0,72,1057	1/1:1,22:23:63.19:802,63,0	1/1:1,21:22:56.69:739,57,0	1/1:0,36:36:99:1361,105,0	0/0:16,0:16:48.15:0,48,691	0/0:20,0:20:57.19:0,57,853	0/0:23,0:23:66.21:0,66,970	0/0:17,0:17:51.16:0,51,736	0/0:25,0:25:75.16:0,75,1054	1/1:0,24:24:66.21:856,66,0	0/0:10,0:10:30.10:0,30,450
chr10	31350859	.	GAACCAAAA	G	9513.89	PASS	AB=0.838;AC=43;AF=0.768;AN=56;BaseQRankSum=-0.161;DP=493;FS=1.618;HRun=0;HaplotypeScore=157.5648;InbreedingCoeff=0.6971;MQ=65.99;MQ0=14;MQRankSum=-5.019;QD=25.10;ReadPosRankSum=3.883;VQSLOD=4.6621;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,20:31:35.66:700,36,0	1/1:4,4:11:28.79:456,29,0	0/1:54,0:17:31.40:31,0,418	0/0:42,0:16:16.30:0,16,365	1/1:7,13:21:34.33:588,34,0	1/1:4,8:13:31.12:568,31,0	1/1:5,8:13:22.75:524,23,0	1/1:14,5:19:23.40:433,23,0	0/0:17,0:19:25.33:0,25,761	1/1:13,0:21:36.94:527,37,0	1/1:3,0:21:42.82:779,43,0	1/1:3,7:10:21.54:473,22,0	1/1:4,3:8:15.88:275,16,0	1/1:8,3:12:19.10:326,19,0	0/0:14,0:15:28.10:0,28,646	1/1:5,6:14:33.77:549,34,0	1/1:8,13:23:13.86:563,14,0	1/1:2,5:7:11.16:205,11,0	0/0:12,0:13:14.86:0,15,187	0/0:12,0:23:32.37:0,32,325	0/1:4,0:5:18.10:18,0,38	1/1:7,8:16:32.66:583,33,0	1/1:4,14:19:30.83:580,31,0	1/1:4,7:12:10.15:190,10,0	1/1:3,8:14:35.60:640,36,0	1/1:7,9:17:21.16:442,21,0	0/1:8,0:15:0.70:1,0,210	1/1:2,1:2:3.01:66,3,0
chr10	31351280	.	CA	C	3086.71	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=13.277;DP=761;FS=0.882;HRun=1;HaplotypeScore=127.2443;InbreedingCoeff=0.9971;MQ=83.09;MQ0=0;MQRankSum=-3.563;QD=31.82;ReadPosRankSum=-0.110;VQSLOD=3.2784;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:37:99:0,114,1771	0/0:10,0:10:27.09:0,27,431	0/0:23,0:23:69.12:0,69,1026	0/0:26,0:26:71.98:0,72,970	0/0:21,0:21:54.18:0,54,858	0/0:17,0:17:51.16:0,51,786	0/0:33,0:33:99:0,99,1575	0/0:30,0:30:90.28:0,90,1396	0/0:31,0:31:93.26:0,93,1435	0/0:29,0:29:84.28:0,84,1321	0/0:13,0:13:36.12:0,36,574	0/0:43,0:43:99:0,129,2039	0/0:34,0:34:99:0,102,1577	0/0:34,0:34:99:0,102,1607	0/0:44,0:44:99:0,132,2108	0/0:24,0:24:72.23:0,72,1126	0/0:39,0:39:99:0,117,1846	0/0:39,0:39:99:0,114,1766	1/1:0,13:13:39.13:504,39,0	1/1:0,15:15:39.08:486,39,0	1/1:0,48:48:99:1479,114,0	0/0:20,0:20:60.19:0,60,936	0/0:22,0:22:63.19:0,63,961	0/0:40,0:40:99:0,117,1868	0/0:9,0:9:27.09:0,27,431	0/0:38,0:38:99:0,111,1755	1/1:0,21:21:60.19:778,60,0	0/0:7,0:7:18.06:0,18,288
chr10	31352263	.	TA	T	964.30	PASS	AB=0.867;AC=17;AF=0.304;AN=56;BaseQRankSum=11.340;DP=556;FS=2.273;HRun=13;HaplotypeScore=76.0894;InbreedingCoeff=0.5285;MQ=69.22;MQ0=0;MQRankSum=-1.526;QD=4.80;ReadPosRankSum=2.954;VQSLOD=2.1066;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,4:35:29.93:0,30,574	0/1:11,1:12:9.38:9,0,177	0/0:7,0:5:9.01:0,9,85	0/0:13,0:11:1.94:0,2,57	0/0:31,2:36:20.99:0,21,619	0/0:19,1:20:28.29:0,28,454	0/1:11,4:15:23.67:24,0,276	0/0:31,0:31:56.16:0,56,683	0/0:20,2:22:10.18:0,10,402	1/1:3,21:25:64.66:465,65,0	1/1:6,11:19:14.80:209,15,0	0/0:16,2:18:20.09:0,20,339	0/1:13,2:15:4.78:5,0,272	0/0:14,1:15:11.12:0,11,259	0/0:15,0:15:17.10:0,17,313	0/0:22,1:23:31.86:0,32,442	0/0:20,4:24:13.18:0,13,426	0/0:24,1:25:44.46:0,44,546	1/1:4,1:15:23.35:81,23,0	1/1:1,1:14:26.10:92,26,0	1/1:6,1:17:17.87:69,18,0	0/0:22,1:23:29.16:0,29,441	0/0:19,0:19:42.04:0,42,394	0/0:10,1:11:2.09:0,2,174	0/1:12,2:14:7.77:8,0,250	0/1:22,4:26:33.49:33,0,355	1/1:6,1:29:49.77:157,50,0	0/0:18,0:18:30:0,30,273
chr10	31352328	.	TA	T	2570.29	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=12.917;DP=621;FS=12.226;HRun=1;HaplotypeScore=76.2533;InbreedingCoeff=0.9967;MQ=74.38;MQ0=0;MQRankSum=-3.385;QD=34.27;ReadPosRankSum=-0.240;VQSLOD=2.1442;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:99:0,99,1335	0/0:13,0:13:38.99:0,39,481	0/0:24,0:22:61.98:0,62,670	0/0:13,1:14:21.77:0,22,280	0/0:33,0:33:99:0,99,1319	0/0:28,0:28:81.24:0,81,1104	0/0:16,0:16:39.12:0,39,533	0/0:38,0:38:99:0,114,1495	0/0:26,0:26:77.83:0,78,1034	0/0:26,0:26:78.25:0,78,1059	0/0:18,0:18:54.15:0,54,719	0/0:24,0:24:72.20:0,72,964	0/0:21,0:21:63.18:0,63,841	0/0:27,0:27:81.16:0,81,1064	0/0:21,0:21:63.20:0,63,859	0/0:29,0:29:76.78:0,77,1034	0/0:23,0:23:69.23:0,69,961	0/0:31,0:31:93.26:0,93,1245	1/1:2,16:18:54.10:668,54,0	1/1:2,15:17:48.11:628,48,0	1/1:2,19:21:54.12:698,54,0	0/0:21,0:21:63.15:0,63,839	0/0:19,0:19:57.19:0,57,785	0/0:16,0:16:37.02:0,37,557	0/0:13,0:13:39.11:0,39,523	0/0:26,0:26:78.24:0,78,1057	1/1:2,17:19:54.17:737,54,0	0/0:6,0:6:18.06:0,18,239
chr10	31353376	.	GT	G	4269.94	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=12.925;DP=700;FS=1.261;HRun=1;HaplotypeScore=74.6353;InbreedingCoeff=0.9974;MQ=90.25;MQ0=1;MQRankSum=-4.754;QD=36.81;ReadPosRankSum=-0.572;VQSLOD=4.9206;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,129,2041	0/0:7,0:7:21.07:0,21,336	0/0:30,0:30:90.29:0,90,1386	0/0:32,0:32:78.23:0,78,1163	0/0:18,0:18:48.16:0,48,762	0/0:18,0:18:54.18:0,54,848	0/0:25,0:25:75.26:0,75,1199	0/0:51,0:50:99:0,147,2240	0/0:21,0:21:60.20:0,60,950	0/0:14,0:14:39.11:0,39,592	0/0:13,0:13:39.12:0,39,597	0/0:25,0:25:75.26:0,75,1197	0/0:25,0:25:75.26:0,75,1196	0/0:29,0:29:84.27:0,84,1318	0/0:24,0:24:72.25:0,72,1151	0/0:31,0:31:93.31:0,93,1470	0/0:49,0:49:99:0,148,2350	0/0:27,0:27:81.28:0,81,1294	1/1:0,20:20:57.15:771,57,0	1/1:0,17:17:39.06:521,39,0	1/1:0,52:51:99:1972,141,0	0/0:16,0:16:45.15:0,45,718	0/0:7,0:7:21.02:0,21,307	0/0:40,0:40:99:0,120,1894	0/0:10,0:10:30.10:0,30,480	0/0:14,0:14:42.13:0,42,631	1/1:0,27:27:72.24:1007,72,0	0/0:11,0:11:33.10:0,33,503
chr10	31354677	.	T	TCCTAA	8066.99	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-8.449;DP=895;FS=2.909;HRun=0;HaplotypeScore=160.3851;InbreedingCoeff=1.0000;MQ=85.85;MQ0=0;MQRankSum=-6.496;QD=72.03;ReadPosRankSum=-0.569;VQSLOD=6.1430;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:80,0:80:99:0,229,4796	0/0:14,0:14:42.14:0,42,890	0/0:34,0:34:90.28:0,90,1833	0/0:25,0:25:53.16:0,53,996	0/0:25,0:25:72.25:0,72,1522	0/0:16,0:16:48.15:0,48,983	0/0:37,0:37:99:0,111,2243	0/0:38,0:38:99:0,108,2248	0/0:28,0:28:81.22:0,81,1555	0/0:36,0:36:99:0,108,2265	0/0:25,0:25:75.24:0,75,1559	0/0:43,0:43:99:0,126,2606	0/0:29,0:29:87.27:0,87,1783	0/0:27,0:27:81.26:0,81,1667	0/0:45,0:45:99:0,123,2482	0/0:35,0:35:99:0,99,2025	0/0:43,0:43:99:0,126,2518	0/0:24,0:24:69.24:0,69,1470	1/1:2,24:29:87.26:2399,87,0	1/1:2,19:23:60.16:1801,60,0	1/1:6,30:37:81.06:2365,81,0	0/0:29,0:29:78.23:0,78,1554	0/0:28,0:28:81.26:0,81,1662	0/0:37,0:37:99:0,105,2154	0/0:34,0:34:99:0,102,2166	0/0:34,0:34:90.29:0,90,1804	1/1:2,19:23:48.16:1502,48,0	0/0:17,0:17:51.18:0,51,1086
chr10	31357908	.	G	GTA	1441.38	PASS	AC=6;AF=0.111;AN=54;BaseQRankSum=9.828;DP=687;FS=0.000;HRun=0;HaplotypeScore=112.5674;InbreedingCoeff=0.9882;MQ=83.57;MQ0=0;MQRankSum=-9.038;QD=17.16;ReadPosRankSum=-0.490;VQSLOD=3.0718;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,99,1513	0/0:9,0:9:27.09:0,27,413	0/0:31,0:31:90.26:0,90,1293	0/0:22,0:22:62:0,62,828	0/0:27,0:27:78.25:0,78,1169	0/0:23,0:23:63.21:0,63,960	0/0:25,0:25:69.22:0,69,1027	0/0:39,0:39:99:0,117,1710	0/0:15,0:15:45.15:0,45,686	0/0:31,0:31:90.31:0,90,1378	0/0:19,0:19:54.17:0,54,803	0/0:18,0:18:51.17:0,51,776	0/0:20,0:20:57.19:0,57,869	0/0:29,0:29:81.26:0,81,1213	0/0:32,0:32:93.30:0,93,1401	0/0:17,0:17:51.15:0,51,739	0/0:27,0:27:81.25:0,81,1214	0/0:31,0:31:81.22:0,81,1190	1/1:17,8:25:26:514,26,0	1/1:7,19:26:44.17:456,44,0	./.	0/0:24,0:24:72.24:0,72,1101	0/0:19,0:19:51.16:0,51,760	0/0:27,0:27:78.26:0,78,1194	0/0:28,0:27:84.22:0,84,1227	0/0:40,0:40:99:0,120,1777	1/1:13,19:33:46.06:613,46,0	0/0:5,0:4:12.04:0,12,184
chr10	31357910	.	G	GTA	1352.23	PASS	AC=6;AF=0.111;AN=54;BaseQRankSum=11.821;DP=672;FS=2.630;HRun=0;HaplotypeScore=107.8415;InbreedingCoeff=0.9826;MQ=84.46;MQ0=0;MQRankSum=-9.994;QD=18.03;ReadPosRankSum=-0.817;VQSLOD=3.7876;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,102,1629	0/0:9,0:9:27.09:0,27,440	0/0:31,0:31:90.28:0,90,1370	0/0:24,0:24:14.63:0,15,784	0/0:26,0:26:78.24:0,78,1217	0/0:23,0:23:63.22:0,63,1021	0/0:23,0:23:69.19:0,69,1086	0/0:38,0:38:99:0,111,1721	0/0:15,0:15:45.14:0,45,706	0/0:30,0:30:90.31:0,90,1464	0/0:19,0:19:54.17:0,54,855	0/0:18,0:18:51.17:0,51,826	0/0:20,0:20:60.17:0,60,927	0/0:30,0:30:87.27:0,87,1343	0/0:31,0:31:93.29:0,93,1466	0/0:17,0:17:51.15:0,51,784	0/0:27,0:27:78.27:0,78,1268	0/0:30,0:30:84.23:0,84,1290	1/1:14,8:22:42.66:450,43,0	1/1:5,18:23:43.16:458,43,0	./.	0/0:24,0:24:72.25:0,72,1164	0/0:18,0:18:54.16:0,54,831	0/0:29,0:29:84.27:0,84,1324	0/0:29,0:28:87.14:0,87,1300	0/0:40,0:40:99:0,117,1858	1/1:12,18:30:55.23:586,55,0	0/0:5,0:4:12.04:0,12,196
chr10	31357937	.	A	ATG	3406.81	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=4.540;DP=687;FS=0.980;HRun=0;HaplotypeScore=101.4242;InbreedingCoeff=0.9984;MQ=72.79;MQ0=2;MQRankSum=-7.066;QD=37.85;ReadPosRankSum=-1.746;VQSLOD=5.1021;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,126,1806	0/0:11,0:11:27.09:0,27,397	0/0:30,0:30:79.32:0,79,1225	0/0:26,0:26:63.52:0,64,971	0/0:25,0:25:69.22:0,69,996	0/0:23,0:23:66.22:0,66,971	0/0:28,0:28:81.25:0,81,1146	0/0:33,0:33:84.26:0,84,1183	0/0:14,0:14:42.13:0,42,595	0/0:30,0:30:84.28:0,84,1220	0/0:18,0:18:54.17:0,54,774	0/0:21,0:21:63.21:0,63,925	0/0:22,0:22:63.21:0,63,923	0/0:25,0:25:75.22:0,75,1062	0/0:24,0:24:72.24:0,72,1058	0/0:22,0:22:66.21:0,66,950	0/0:20,0:20:60.20:0,60,883	0/0:35,0:35:99:0,105,1541	1/1:4,18:23:63.19:1080,63,0	1/1:2,23:25:46.22:796,46,0	1/1:2,14:16:29.13:511,29,0	0/0:24,0:24:69.05:0,69,967	0/0:18,0:18:54.17:0,54,771	0/0:25,0:25:75.19:0,75,1058	0/0:32,0:31:93.31:0,93,1366	0/0:39,0:39:99:0,111,1613	1/1:0,24:24:58.26:1020,58,0	0/0:8,0:7:21.04:0,21,269
chr10	31358302	.	A	AC	21113.82	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-11.195;DP=650;FS=0.413;HRun=2;HaplotypeScore=60.8365;InbreedingCoeff=0.9963;MQ=92.48;MQ0=0;MQRankSum=-9.309;QD=38.46;ReadPosRankSum=5.677;VQSLOD=4.9604;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,36:39:99:1461,102,0	1/1:1,6:7:18.06:259,18,0	0/0:34,0:34:92.74:0,93,1085	0/0:31,0:30:83.32:0,83,923	1/1:0,17:17:48.12:665,48,0	1/1:1,15:16:42.14:604,42,0	1/1:0,31:31:78.25:1123,78,0	1/1:2,30:32:93.19:1220,93,0	0/0:16,0:16:45.14:0,45,558	1/1:0,22:22:66.17:907,66,0	1/1:0,10:10:27.01:362,27,0	1/1:1,21:22:60.20:863,60,0	1/1:2,28:30:84.28:1209,84,0	1/1:1,23:24:60.20:864,60,0	0/0:20,0:20:57.15:0,57,682	1/1:1,18:19:54.18:777,54,0	1/1:1,34:35:99:1425,99,0	1/1:2,22:24:63.21:903,63,0	1/1:0,28:28:84.26:1170,84,0	1/1:0,15:15:42.07:578,42,0	1/1:2,46:48:99:1683,117,0	1/1:1,19:20:54.18:775,54,0	1/1:0,19:19:48.13:691,48,0	1/1:1,26:27:69.23:993,69,0	1/1:0,17:17:42.14:600,42,0	1/1:0,18:18:54.18:777,54,0	1/1:0,21:22:63.21:904,63,0	1/1:0,7:7:21.07:302,21,0
chr10	31358833	.	AG	A	3869.39	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=12.991;DP=704;FS=5.475;HRun=3;HaplotypeScore=74.1573;InbreedingCoeff=0.8992;MQ=75.13;MQ0=1;MQRankSum=-1.839;QD=32.24;ReadPosRankSum=0.042;VQSLOD=3.7174;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,138,1947	0/0:5,0:5:12.04:0,12,171	0/0:20,0:20:50.90:0,51,692	0/1:9,0:8:3.38:3,0,142	0/0:29,0:29:84.28:0,84,1206	0/0:30,0:30:87.29:0,87,1253	0/0:24,0:24:72.23:0,72,1018	0/0:28,0:28:78.26:0,78,1106	0/0:22,0:22:63.21:0,63,904	0/0:30,0:30:84.27:0,84,1193	0/0:22,0:22:60.20:0,60,864	0/0:26,0:26:72.23:0,72,1010	0/0:25,0:25:69.23:0,69,973	0/0:26,0:26:78.21:0,78,1081	0/0:32,0:32:96.31:0,96,1362	0/0:21,0:21:63.21:0,63,904	0/0:27,0:27:81.22:0,81,1102	0/0:22,0:22:60.19:0,60,846	1/1:3,23:26:71.95:857,72,0	1/1:0,24:24:72.23:892,72,0	1/1:0,35:35:99:1264,102,0	0/0:19,0:19:57.16:0,57,781	0/0:30,0:30:90.29:0,90,1268	0/0:27,0:27:72.23:0,72,1018	0/0:18,0:18:54.17:0,54,758	0/0:35,0:35:99:0,102,1451	1/1:2,24:26:69.22:853,69,0	0/0:17,0:17:51.13:0,51,679
chr10	31359063	.	GA	G	3787.63	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=10.729;DP=621;FS=0.000;HRun=2;HaplotypeScore=59.5803;InbreedingCoeff=0.9978;MQ=63.95;MQ0=6;MQRankSum=1.944;QD=35.07;ReadPosRankSum=-0.315;VQSLOD=3.6396;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:81.27:0,81,1213	0/0:19,0:19:57.19:0,57,850	0/0:31,0:19:57.04:0,57,785	0/0:22,0:12:25.90:0,26,347	0/0:19,0:19:54.18:0,54,808	0/0:24,0:24:72.23:0,72,1059	0/0:15,0:15:45.15:0,45,674	0/0:25,0:25:69.22:0,69,1012	0/0:20,0:20:60.20:0,60,899	0/0:26,0:26:75.25:0,75,1124	0/0:11,0:11:33.11:0,33,495	0/0:23,0:23:69.22:0,69,1015	0/0:22,0:22:66.22:0,66,988	0/0:20,0:20:60.20:0,60,899	0/0:29,0:29:84.28:0,84,1258	0/0:26,0:26:75.25:0,75,1124	0/0:24,0:24:72.20:0,72,1052	0/0:35,0:35:99:0,102,1522	1/1:4,21:23:21.22:755,21,0	1/1:0,22:22:63.20:816,63,0	1/1:1,31:32:90.29:1169,90,0	0/0:18,0:18:54.18:0,54,808	0/0:14,0:14:42.14:0,42,629	0/0:22,0:22:66.22:0,66,987	0/0:13,0:13:36.11:0,36,521	0/0:18,0:18:51.16:0,51,745	1/1:0,29:29:81.26:1048,81,0	0/0:8,0:8:24.08:0,24,360
chr10	31360291	.	A	AT	2703.81	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=-10.460;DP=615;FS=0.426;HRun=8;HaplotypeScore=60.8910;InbreedingCoeff=0.9030;MQ=76.19;MQ0=0;MQRankSum=-2.253;QD=23.93;ReadPosRankSum=-0.448;VQSLOD=4.0678;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:79.32:0,79,879	0/0:13,0:13:30:0,30,275	0/0:15,0:15:29.79:0,30,248	0/1:11,0:11:3.80:4,0,192	0/0:27,0:27:72.04:0,72,659	0/0:18,0:18:54.03:0,54,494	0/0:28,0:28:78.02:0,78,709	0/0:29,0:29:72.01:0,72,655	0/0:19,0:19:48.01:0,48,439	0/0:28,0:28:72.01:0,72,654	0/0:12,0:12:24:0,24,220	0/0:29,0:29:71.97:0,72,642	0/0:27,0:27:69.03:0,69,631	0/0:21,0:21:60.02:0,60,546	0/0:23,0:23:63.03:0,63,577	0/0:18,0:18:51.02:0,51,463	0/0:25,0:25:66.01:0,66,600	0/0:15,0:15:45.02:0,45,412	1/1:4,20:24:60.15:679,60,0	1/1:5,16:21:27.92:555,28,0	1/1:2,24:26:69.21:796,69,0	0/0:14,0:14:42:0,42,376	0/0:20,0:20:54.01:0,54,489	0/0:20,0:20:47.97:0,48,431	0/0:28,0:28:53.51:0,54,681	0/0:19,0:19:54.03:0,54,494	1/1:4,27:31:72.21:831,72,0	0/0:16,0:16:48:0,48,433
chr10	31361833	.	C	CT	5477.05	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-0.510;DP=643;FS=1.670;HRun=0;HaplotypeScore=67.8958;InbreedingCoeff=0.9986;MQ=79.17;MQ0=0;MQRankSum=-1.721;QD=43.82;ReadPosRankSum=1.231;VQSLOD=5.3560;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:90.29:0,90,1239	0/0:9,0:9:21.07:0,21,293	0/0:18,0:18:54.17:0,54,730	0/0:14,0:14:42.14:0,42,576	0/0:13,0:13:35.99:0,36,474	0/0:24,0:24:72.23:0,72,985	0/0:21,0:21:60.17:0,60,814	0/0:22,0:22:66.09:0,66,855	0/0:20,0:20:57.18:0,57,778	0/0:23,0:23:63.18:0,63,858	0/0:13,0:13:30.04:0,30,368	0/0:32,0:32:93.30:0,93,1273	0/0:31,0:31:93.30:0,93,1276	0/0:29,0:29:87.29:0,87,1209	0/0:12,0:12:36.11:0,36,485	0/0:20,0:20:60.20:0,60,837	0/0:27,0:27:75.17:0,75,986	0/0:29,0:29:84.23:0,84,1125	1/1:1,19:20:60.13:856,60,0	1/1:1,29:30:84.29:1341,84,0	1/1:0,45:45:99:1917,120,0	0/0:23,0:23:69.23:0,69,961	0/0:18,0:18:51.14:0,51,672	0/0:33,0:33:93.30:0,93,1280	0/0:13,0:13:36.10:0,36,471	0/0:26,0:26:78.17:0,78,1042	1/1:1,29:29:87.28:1363,87,0	0/0:15,0:15:42.14:0,42,581
chr10	31362716	.	CATGTATGTATGT	C	1189.53	PASS	AB=0.951;AC=16;AF=0.296;AN=54;BaseQRankSum=-2.755;DP=839;FS=7.293;HRun=0;HaplotypeScore=265.6939;InbreedingCoeff=0.0476;MQ=46.20;MQ0=9;MQRankSum=2.684;QD=3.45;ReadPosRankSum=-0.941;VQSLOD=0.8724;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:1,0:49:5.91:0,6,86	1/1:3,0:18:3.88:27,4,0	0/0:46,0:22:57.47:0,57,1347	0/0:44,0:17:13.93:0,14,492	0/1:4,0:31:19.32:19,0,57	0/1:13,0:13:15.12:15,0,89	0/0:34,0:34:15.44:0,15,183	0/1:53,0:53:99:194,0,1491	0/0:14,0:13:36.12:0,36,2111	0/0:51,0:50:45.03:0,45,3314	0/0:26,0:26:9.01:0,9,144	0/0:0,0:39:2.92:0,3,17	0/0:37,0:37:7.05:0,7,510	0/1:31,0:31:1.07:1,0,229	0/0:39,0:39:99:0,114,5956	0/0:4,0:35:5.91:0,6,99	0/0:31,0:31:20.69:0,21,385	0/1:24,0:24:44.28:44,0,465	1/1:3,11:12:29.96:596,30,0	0/1:1,23:24:0:0,0,0	./.	0/1:27,0:27:14.30:14,0,134	0/1:22,0:22:37.97:63,0,38	0/0:24,0:24:1.95:0,2,199	0/1:38,0:38:21.59:22,0,63	0/1:33,0:33:99:163,0,1917	1/1:1,15:17:8.99:183,9,0	0/0:5,0:5:2.01:0,2,87
chr10	31362720	.	T	TATGC	2688.07	PASS	AB=0.839;AC=20;AF=0.370;AN=54;BaseQRankSum=0.973;DP=826;FS=4.691;HRun=0;HaplotypeScore=204.4714;InbreedingCoeff=-0.1975;MQ=46.01;MQ0=8;MQRankSum=-1.450;QD=5.71;ReadPosRankSum=0.485;VQSLOD=2.3059;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:5.98:0,6,47	1/1:16,0:16:2.18:48,2,0	0/0:45,0:21:53.48:0,53,711	0/0:39,0:14:16.93:0,17,274	0/1:29,0:29:36.51:37,0,59	0/1:8,5:13:15.01:15,0,41	0/0:18,14:33:7.99:0,8,70	0/1:15,32:53:42:972,0,42	0/0:16,0:15:42.11:0,42,732	0/1:51,0:50:99:420,0,334	0/0:24,0:24:3.38:0,3,25	0/0:39,0:39:3:0,3,25	0/1:30,7:37:50.66:56,0,51	0/1:24,9:33:26.17:26,0,105	0/0:40,0:40:99:0,114,2121	0/0:32,0:32:8.91:0,9,68	0/1:10,18:30:60.96:61,0,101	0/1:25,1:26:77.30:338,0,77	0/1:12,0:10:52.67:93,0,53	0/1:24,0:24:0:0,0,0	./.	0/1:20,7:27:35.03:85,0,35	0/1:18,6:24:13:63,0,13	0/0:17,9:26:0.75:0,1,111	0/1:19,19:40:41.75:42,0,61	0/1:34,0:34:99:389,0,103	1/1:17,0:17:8.99:108,9,0	1/1:5,0:5:11.74:91,12,0
chr10	31363061	.	T	TACAC	14856.53	PASS	AB=0.728;AC=44;AF=0.786;AN=56;BaseQRankSum=-4.766;DP=723;FS=5.478;HRun=0;HaplotypeScore=121.0409;InbreedingCoeff=0.4822;MQ=60.30;MQ0=6;MQRankSum=0.903;QD=24.64;ReadPosRankSum=0.986;VQSLOD=4.5440;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,26:40:54.81:1242,55,0	1/1:4,8:15:21.07:511,21,0	0/0:37,0:17:11.97:0,12,159	0/1:28,0:16:22.44:22,0,70	1/1:5,11:19:23.44:514,23,0	1/1:6,16:22:37.01:879,37,0	1/1:7,22:31:33.11:805,33,0	0/1:13,7:24:14.44:431,0,14	0/0:24,0:24:60.19:0,60,943	1/1:7,0:25:3.24:203,3,0	0/1:10,1:22:99:144,0,133	1/1:11,22:34:44.78:1017,45,0	1/1:11,16:29:41.61:897,42,0	1/1:8,13:25:29.84:668,30,0	0/0:23,0:23:45.13:0,45,687	1/1:5,16:26:44.56:855,45,0	1/1:8,19:35:29.37:624,29,0	0/1:6,13:20:16.86:488,0,17	1/1:9,0:25:39.56:314,40,0	1/1:4,1:18:15.05:255,15,0	0/0:15,0:35:3.47:0,3,29	1/1:2,18:24:32.85:740,33,0	1/1:3,11:16:15.05:366,15,0	1/1:11,23:34:45.15:1097,45,0	1/1:14,11:27:41.35:802,41,0	1/1:1,15:25:71.09:1209,71,0	1/1:4,2:19:5.07:105,5,0	1/1:3,13:19:29.84:670,30,0
chr10	31364147	.	C	CTGA	6356.65	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=9.315;DP=740;FS=9.308;HRun=0;HaplotypeScore=110.9613;InbreedingCoeff=0.9998;MQ=76.84;MQ0=0;MQRankSum=-2.702;QD=51.68;ReadPosRankSum=0.358;VQSLOD=6.7254;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:58:99:0,160,2610	0/0:12,0:12:36.11:0,36,566	0/0:15,0:15:32.94:0,33,495	0/0:20,0:20:39.60:0,40,613	0/0:22,0:22:63.22:0,63,1049	0/0:25,0:25:57.18:0,57,914	0/0:38,0:38:96.33:0,96,1587	0/0:29,0:29:81.26:0,81,1297	0/0:20,0:20:60.21:0,60,999	0/0:23,0:23:63.21:0,63,1014	0/0:16,0:16:39.13:0,39,649	0/0:29,0:28:69.24:0,69,1140	0/0:29,0:29:87.30:0,87,1438	0/0:26,0:25:63.22:0,63,1040	0/0:31,0:31:90.29:0,90,1467	0/0:27,0:27:69.14:0,69,1058	0/0:29,0:28:81.28:0,81,1341	0/0:20,0:20:60.17:0,60,970	1/1:3,15:18:48.12:996,48,0	1/1:5,19:27:57.20:1288,57,0	1/1:5,47:53:99:2580,114,0	0/0:19,0:19:54.17:0,54,874	0/0:15,0:15:42.14:0,42,696	0/0:45,0:44:99:0,123,2012	0/0:22,0:22:63.19:0,63,1022	0/0:35,0:35:99:0,105,1747	1/1:1,24:25:66.23:1493,66,0	0/0:12,0:12:36.12:0,36,585
chr10	31364332	.	GAC	G	755.21	PASS	AB=0.990;AC=26;AF=0.520;AN=50;BaseQRankSum=6.737;DP=634;FS=15.369;HRun=0;HaplotypeScore=127.1697;InbreedingCoeff=-0.0965;MQ=40.40;MQ0=43;MQRankSum=1.633;QD=1.44;ReadPosRankSum=-4.541;VQSLOD=-0.3041;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:45,1:39:18.95:127,19,0	0/1:15,0:15:15.38:38,0,15	./.	./.	0/1:22,1:22:0:0,0,0	0/0:26,0:24:5.58:0,6,34	1/1:27,1:24:11.50:100,12,0	0/1:23,1:20:8.32:8,0,286	0/0:17,0:15:23.24:0,23,431	0/1:12,0:10:49.24:63,0,49	./.	0/1:29,0:29:3.47:13,0,3	0/1:23,1:24:37.20:37,0,44	1/1:35,0:31:7.46:39,7,0	0/0:27,0:27:58.73:0,59,759	0/1:31,0:29:17.91:18,0,43	0/1:22,1:19:8.58:9,0,80	0/1:9,0:4:31.80:41,0,32	0/1:23,0:20:21.79:86,0,22	0/1:24,0:19:0:0,0,0	0/1:16,0:10:0.04:0,0,0	0/0:31,0:26:3.01:0,3,38	0/1:22,0:20:0:0,0,0	1/1:33,1:29:1.25:3,1,0	0/1:31,0:27:7.27:48,0,7	0/1:29,0:21:99:113,0,305	0/1:39,0:37:34.26:34,0,56	1/1:7,0:6:14.94:117,15,0
chr10	31364336	.	GAGAGACAGAGAGACAGAGAC	G	1832.57	PASS	AB=0.828;AC=9;AF=0.173;AN=52;BaseQRankSum=5.102;DP=657;FS=12.299;HRun=0;HaplotypeScore=190.6729;InbreedingCoeff=0.0711;MQ=42.29;MQ0=40;MQRankSum=-3.476;QD=9.30;ReadPosRankSum=0.916;VQSLOD=2.0191;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:40:0.64:0,1,4	0/0:17,0:17:3.40:0,3,109	./.	0/0:2,0:2:6:0,6,97	0/1:24,0:23:0:0,0,0	0/0:28,0:26:3.39:0,3,28	0/1:28,0:23:3.58:4,0,28	0/0:26,0:22:12.21:0,12,638	0/0:18,0:17:36.12:0,36,2070	0/1:16,0:14:99:373,0,115	./.	0/0:29,0:29:4.21:0,4,9	0/1:23,0:23:9.43:9,0,53	0/0:34,0:30:5.38:0,5,17	0/0:28,0:28:75.17:0,75,4037	0/0:30,0:28:7.42:0,7,108	0/0:23,0:19:18.04:0,18,265	0/0:10,0:5:12.03:0,12,343	0/1:8,14:20:99:1110,0,158	0/1:6,19:20:0:0,0,0	1/1:20,0:14:1.38:4,1,0	0/0:29,0:25:3.48:0,3,120	0/0:25,0:23:0.47:0,0,1	0/0:37,0:32:1.82:0,2,5	0/0:28,0:24:3.48:0,3,110	0/0:29,0:21:48.59:0,49,970	0/1:15,24:37:82.43:437,0,82	0/0:7,0:6:14.15:0,14,244
chr10	31364346	.	GAGACAGAGAC	G	2709.74	PASS	AB=0.868;AC=22;AF=0.407;AN=54;BaseQRankSum=6.738;DP=642;FS=3.400;HRun=0;HaplotypeScore=134.7170;InbreedingCoeff=0.3239;MQ=45.15;MQ0=38;MQRankSum=-5.397;QD=8.58;ReadPosRankSum=0.640;VQSLOD=2.6183;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,25:37:0:0,0,0	0/0:5,7:12:2.99:0,3,23	0/0:8,0:5:15.05:0,15,263	0/0:9,0:6:15.52:0,16,265	0/1:7,16:22:0:0,0,0	0/1:10,16:25:0.08:0,0,1	1/1:26,0:21:17.98:349,18,0	1/1:25,0:21:39.13:617,39,0	0/0:19,0:18:39.13:0,39,1044	0/1:15,0:13:31.48:56,0,31	0/0:11,0:9:2.37:0,2,8	0/0:10,20:30:0.47:0,0,2	1/1:5,21:26:1.91:45,2,0	0/0:10,20:26:0:0,0,1	0/0:26,0:26:69.24:0,69,1966	1/1:7,24:29:5.58:80,6,0	1/1:11,17:24:3.01:93,3,0	0/1:10,0:5:31.71:176,0,32	0/1:17,0:15:23.73:361,0,24	0/0:23,0:19:0:0,0,0	1/1:22,0:17:0.41:1,0,0	0/0:9,19:24:3.01:0,3,52	0/0:8,17:23:0.44:0,0,1	./.	0/0:15,13:24:3.01:0,3,37	1/1:29,0:21:27.02:563,27,0	0/1:32,0:30:34.31:149,0,34	1/1:6,0:5:15.05:366,15,0
chr10	31364352	.	GAGAC	G	868.87	PASS	AB=0.909;AC=25;AF=0.481;AN=52;BaseQRankSum=7.551;DP=617;FS=0.000;HRun=0;HaplotypeScore=116.8451;InbreedingCoeff=0.4067;MQ=48.90;MQ0=31;MQRankSum=-4.662;QD=2.34;ReadPosRankSum=2.990;VQSLOD=1.2753;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,1:31:0:0,0,0	0/0:10,1:11:2.99:0,3,24	0/0:11,0:8:24.08:0,24,519	0/0:13,0:10:18.74:0,19,369	0/1:20,2:21:0:0,0,0	0/1:22,2:23:0:0,0,0	1/1:22,3:21:4.10:23,4,0	1/1:19,3:18:5.18:237,5,0	0/0:19,0:18:45.15:0,45,985	0/1:16,0:15:8.14:8,0,45	0/0:11,0:9:4.72:0,5,16	1/1:28,1:29:0.22:1,0,0	1/1:24,1:25:2.20:11,2,0	0/1:25,2:25:0.08:0,0,0	0/0:27,0:27:78.27:0,78,1783	1/1:26,1:27:5.93:81,6,0	1/1:24,2:22:3.01:32,3,0	0/0:10,1:7:0.87:0,1,42	1/1:17,0:15:11.64:423,12,0	./.	0/1:9,13:19:0:0,0,1	0/0:26,1:24:3.01:0,3,42	0/1:24,1:23:0.13:0,0,0	./.	0/0:21,1:20:3.01:0,3,37	1/1:25,1:18:7.75:102,8,0	0/1:32,0:30:20.38:52,0,20	1/1:6,0:5:8.59:37,9,0
chr10	31364354	.	GAC	G	1652.11	PASS	AB=0.931;AC=22;AF=0.423;AN=52;BaseQRankSum=7.022;DP=602;FS=2.140;HRun=0;HaplotypeScore=103.9635;InbreedingCoeff=0.1682;MQ=51.44;MQ0=31;MQRankSum=-3.062;QD=4.76;ReadPosRankSum=1.690;VQSLOD=2.7932;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:30:0:0,0,0	0/0:9,0:9:3.01:0,3,50	0/0:14,0:11:22.93:0,23,421	0/0:13,0:11:15.90:0,16,325	0/1:21,0:20:0:0,0,0	1/1:22,0:21:1.14:3,1,0	1/1:12,13:21:17.90:248,18,0	1/1:11,10:17:1.74:535,2,0	0/0:19,0:18:45.15:0,45,846	0/1:16,0:15:31.34:64,0,31	0/0:11,0:9:3.26:0,3,10	1/1:26,1:27:0.30:1,0,0	0/1:23,0:23:8.24:40,0,8	0/1:24,1:24:0:0,0,0	0/0:27,0:27:78.27:0,78,1489	0/1:26,0:26:2.84:3,0,3	1/1:26,0:22:2.99:23,3,0	0/1:4,7:8:41.97:126,0,42	0/1:17,0:15:29.02:151,0,29	./.	0/0:22,0:19:0:0,0,0	0/0:26,0:23:3.01:0,3,31	0/1:24,0:23:0.08:0,0,0	./.	0/0:21,0:18:3.01:0,3,30	0/1:17,7:16:83.76:356,0,84	0/1:32,0:30:5.97:6,0,48	1/1:1,5:5:15.05:229,15,0
chr10	31364358	.	GAC	G	476.01	PASS	AB=0.931;AC=12;AF=0.214;AN=56;BaseQRankSum=5.686;DP=605;FS=0.700;HRun=0;HaplotypeScore=113.6472;InbreedingCoeff=0.1407;MQ=54.56;MQ0=27;MQRankSum=-4.348;QD=2.78;ReadPosRankSum=1.934;VQSLOD=2.2544;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:30:6.02:0,6,80	0/0:10,0:10:6:0,6,64	0/0:18,0:14:24.38:0,24,579	0/0:17,0:13:29.62:0,30,422	0/0:20,0:20:2.99:0,3,40	0/1:21,0:20:0.11:0,0,0	0/0:22,1:20:10.05:0,10,28	0/1:21,0:17:34.67:35,0,56	0/0:19,0:19:47.83:0,48,816	0/1:4,10:13:8.36:402,0,8	1/1:5,9:12:6.02:85,6,0	0/0:26,2:28:2.27:0,2,39	1/1:24,0:24:2.66:18,3,0	0/0:25,0:25:3.01:0,3,41	0/0:26,0:26:78.27:0,78,1488	1/1:25,0:25:3.26:16,3,0	0/1:25,0:21:7.46:7,0,29	0/0:12,0:8:7.80:0,8,31	0/1:19,0:17:36.06:36,0,131	0/0:24,0:20:3.01:0,3,40	0/0:20,0:18:0:0,0,0	0/0:25,0:23:5.77:0,6,34	0/0:22,0:21:2.93:0,3,36	0/0:31,0:26:3.01:0,3,40	0/0:20,0:17:5.92:0,6,42	0/0:23,0:15:4.57:0,5,102	0/0:33,0:31:9.74:0,10,112	0/1:8,0:7:8.12:8,0,72
chr10	31364706	.	CTG	C	3747.18	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=12.422;DP=703;FS=3.200;HRun=0;HaplotypeScore=104.6580;InbreedingCoeff=0.9981;MQ=90.58;MQ0=3;MQRankSum=-2.891;QD=39.03;ReadPosRankSum=0.841;VQSLOD=5.1939;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,157,2950	0/0:12,0:12:27.09:0,27,508	0/0:26,0:26:60.74:0,61,1095	0/0:40,0:37:83.43:0,83,1316	0/0:18,0:18:45.15:0,45,859	0/0:20,0:20:60.21:0,60,1158	0/0:29,0:29:87.28:0,87,1628	0/0:25,0:25:72.21:0,72,1290	0/0:33,0:33:99:0,99,1809	0/0:15,0:15:39.13:0,39,724	0/0:14,0:14:39.12:0,39,703	0/0:25,0:25:75.19:0,75,1305	0/0:27,0:27:81.26:0,81,1528	0/0:33,0:33:99:0,99,1808	0/0:35,0:35:99:0,105,1959	0/0:25,0:25:72.21:0,72,1322	0/0:30,0:30:81.28:0,81,1563	0/0:19,0:19:57.20:0,57,1090	1/1:0,22:22:66.19:948,66,0	1/1:0,15:15:30.07:459,30,0	1/1:0,31:31:78.26:1193,78,0	0/0:13,0:13:36.11:0,36,662	0/0:10,0:10:27.09:0,27,503	0/0:36,0:36:99:0,108,2072	0/0:28,0:27:72.20:0,72,1280	0/0:33,0:33:93.28:0,93,1672	1/1:0,28:26:75.12:1147,75,0	0/0:7,0:7:21.07:0,21,386
chr10	31368474	.	A	ATGTCAGTGCTG	9376.11	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=0.641;DP=794;FS=1.023;HRun=0;HaplotypeScore=251.1103;InbreedingCoeff=0.9976;MQ=83.27;MQ0=0;MQRankSum=-12.864;QD=92.83;ReadPosRankSum=0.587;VQSLOD=4.2851;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:62,0:62:99:0,187,6451	0/0:13,0:13:36.12:0,36,1209	0/0:27,0:27:74.27:0,74,2381	0/0:22,0:22:66.14:0,66,1879	0/0:28,0:28:78.27:0,78,2756	0/0:33,0:33:96.33:0,96,3391	0/0:28,0:28:81.25:0,81,2638	0/0:32,0:32:93.31:0,93,3181	0/0:27,0:27:78.25:0,78,2745	0/0:35,0:35:99:0,105,3621	0/0:17,0:17:48.15:0,48,1524	0/0:22,0:22:66.23:0,66,2381	0/0:29,0:29:87.28:0,87,2998	0/0:32,0:32:96.24:0,96,3204	0/0:33,0:33:99:0,99,3392	0/0:44,0:44:99:0,126,4236	0/0:32,0:32:96.33:0,96,3405	0/0:30,0:30:84.29:0,84,2949	1/1:14,7:23:57.20:2494,57,0	1/1:12,12:26:39.13:2128,39,0	1/1:13,6:21:18.06:1045,18,0	0/0:27,0:27:78.24:0,78,2576	0/0:22,0:22:63.22:0,63,2124	0/0:27,0:27:78.27:0,78,2784	0/0:21,0:21:57.20:0,57,2033	0/0:39,0:39:99:0,114,3958	1/1:6,19:31:68.34:3710,68,0	0/0:11,0:11:33.11:0,33,1171
chr10	31368728	.	TA	T	3164	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=11.302;DP=670;FS=6.625;HRun=4;HaplotypeScore=70.5383;InbreedingCoeff=0.9998;MQ=82.28;MQ0=0;MQRankSum=-2.884;QD=30.72;ReadPosRankSum=1.426;VQSLOD=4.1355;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:96.31:0,96,1326	0/0:12,0:12:33.08:0,33,442	0/0:18,0:18:50.73:0,51,619	0/0:20,0:20:50.85:0,51,592	0/0:21,0:21:63.20:0,63,865	0/0:30,0:30:90.28:0,90,1221	0/0:29,0:29:87.27:0,87,1184	0/0:25,0:25:72.23:0,72,976	0/0:21,0:21:60.19:0,60,823	0/0:23,0:23:69.23:0,69,953	0/0:16,0:16:45.60:0,46,598	0/0:21,0:21:60.02:0,60,840	0/0:17,0:17:51.17:0,51,714	0/0:23,0:23:66.19:0,66,877	0/0:16,0:16:45.14:0,45,613	0/0:19,0:19:54.18:0,54,756	0/0:39,0:39:99:0,114,1560	0/0:21,0:21:63.21:0,63,882	1/1:0,11:11:30.07:338,30,0	1/1:0,26:26:75.23:899,75,0	1/1:0,38:38:99:1188,99,0	0/0:22,0:22:60.20:0,60,836	0/0:29,0:29:78.25:0,78,1074	0/0:27,0:27:81.27:0,81,1134	0/0:30,0:30:87.29:0,87,1209	0/0:39,0:39:99:0,114,1581	1/1:1,27:28:75.23:899,75,0	0/0:16,0:16:45.15:0,45,630
chr10	31368797	.	TA	T	1235.59	PASS	AB=0.748;AC=35;AF=0.625;AN=56;BaseQRankSum=4.948;DP=491;FS=6.177;HRun=17;HaplotypeScore=69.3645;InbreedingCoeff=0.2766;MQ=70.75;MQ0=2;MQRankSum=-2.218;QD=3.10;ReadPosRankSum=2.618;VQSLOD=-0.3097;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,9:17:13.62:72,14,0	1/1:3,4:8:7.59:39,8,0	0/1:23,0:12:0.79:1,0,41	0/0:11,0:6:0:0,0,0	0/1:14,10:25:12.88:107,0,13	0/1:9,13:25:15.36:102,0,15	1/1:6,0:12:17.13:57,17,0	0/1:12,8:20:0.25:42,0,0	0/1:11,2:13:12.61:13,0,92	0/1:6,1:13:2.07:44,0,2	1/1:10,1:17:17.20:58,17,0	0/0:18,2:20:4.17:0,4,124	0/0:15,0:15:26.76:0,27,193	1/1:10,7:18:10.41:55,10,0	0/0:13,5:18:4.18:0,4,125	0/1:8,2:11:14.51:15,0,16	1/1:10,14:26:12.09:154,12,0	0/1:14,11:27:4.19:125,0,4	1/1:12,0:16:12.79:38,13,0	1/1:10,0:20:15.59:45,16,0	1/1:4,0:13:9.32:27,9,0	1/1:4,5:9:11.54:67,12,0	0/0:17,0:17:18.83:0,19,144	0/0:10,0:12:2.99:0,3,25	1/1:8,11:20:19.37:106,19,0	1/1:14,6:23:20.03:99,20,0	1/1:14,0:26:26.24:74,26,0	0/1:9,5:14:27.29:63,0,27
chr10	31369107	.	A	AG	5218.56	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=15.153;DP=696;FS=1.698;HRun=0;HaplotypeScore=70.9544;InbreedingCoeff=0.9994;MQ=89.10;MQ0=0;MQRankSum=-1.016;QD=43.85;ReadPosRankSum=2.389;VQSLOD=5.5147;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,123,1720	0/0:8,0:8:24.07:0,24,321	0/0:24,0:24:60.19:0,60,814	0/0:27,0:27:81.13:0,81,1088	0/0:25,0:25:75.25:0,75,1048	0/0:20,0:20:60.18:0,60,820	0/0:28,0:28:84.28:0,84,1174	0/0:39,0:39:99:0,117,1607	0/0:25,0:25:75.23:0,75,1017	0/0:24,0:24:72.23:0,72,979	0/0:17,0:17:51.17:0,51,707	0/0:26,0:26:78.26:0,78,1091	0/0:23,0:23:69.23:0,69,965	0/0:23,0:23:66.22:0,66,919	0/0:25,0:25:75.24:0,75,1031	0/0:18,0:18:51.16:0,51,697	0/0:23,0:23:69.23:0,69,964	0/0:18,0:18:54.18:0,54,755	1/1:1,29:30:84.29:1337,84,0	1/1:0,29:29:81.28:1294,81,0	1/1:1,25:26:72.25:1151,72,0	0/0:19,0:19:57.18:0,57,779	0/0:15,0:15:45.15:0,45,629	0/0:34,0:34:99:0,102,1426	0/0:29,0:29:87.29:0,87,1212	0/0:30,0:30:87.29:0,87,1211	1/1:1,33:33:90.31:1438,90,0	0/0:15,0:15:45.15:0,45,629
chr10	31369263	.	C	CTT	4702	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-3.438;DP=688;FS=19.298;HRun=8;HaplotypeScore=122.9400;InbreedingCoeff=0.9769;MQ=72.34;MQ0=4;MQRankSum=-0.937;QD=10.29;ReadPosRankSum=2.329;VQSLOD=1.3639;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,0:37:67.37:232,67,0	1/1:1,0:11:25.43:97,25,0	0/0:50,0:31:44.95:0,45,453	0/0:39,0:23:8.88:0,9,284	1/1:5,0:26:50.10:181,50,0	1/1:1,0:12:27.45:95,27,0	1/1:2,0:28:57.39:197,57,0	1/1:8,0:21:23.65:157,24,0	0/0:29,0:29:75.15:0,75,822	1/1:6,24:29:68.90:1021,69,0	1/1:0,20:20:56.23:753,56,0	1/1:1,0:18:32.44:112,32,0	1/1:2,0:23:49.91:172,50,0	1/1:4,0:23:32.16:110,32,0	0/0:28,0:28:69.16:0,69,769	1/1:1,0:27:57.23:197,57,0	1/1:2,0:26:54.90:189,55,0	1/1:1,1:27:57.78:236,58,0	0/0:18,0:18:48.09:0,48,511	0/0:20,0:20:48.11:0,48,534	0/0:21,0:21:57.12:0,57,625	1/1:2,0:21:49.96:188,50,0	1/1:1,0:17:25.74:88,26,0	1/1:2,0:27:49.91:172,50,0	1/1:0,1:23:55.41:228,55,0	1/1:8,0:32:61.12:237,61,0	0/0:26,0:26:78.18:0,78,846	1/1:5,0:7:7.98:41,8,0
chr10	31371292	.	A	AACAC	2247.78	PASS	AB=0.915;AC=32;AF=0.667;AN=48;BaseQRankSum=-2.075;DP=673;FS=12.433;HRun=0;HaplotypeScore=125.8395;InbreedingCoeff=0.3311;MQ=62.97;MQ0=30;MQRankSum=0.106;QD=5.28;ReadPosRankSum=-0.972;VQSLOD=1.8488;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:41,0:48:4.35:46,4,0	1/1:10,0:10:11.73:105,12,0	./.	./.	0/0:15,1:15:2.99:0,3,26	1/1:17,0:20:5.95:76,6,0	1/1:36,0:36:21.04:256,21,0	0/0:22,0:22:0.80:0,1,2	0/1:20,0:19:1.15:1,0,116	0/1:21,1:21:42.65:164,0,43	1/1:13,0:18:3.89:29,4,0	0/1:16,7:24:25.66:231,0,26	0/1:14,0:13:33.77:144,0,34	1/1:10,10:22:18.06:413,18,0	0/0:25,0:25:17.96:0,18,263	1/1:17,1:21:5.75:82,6,0	1/1:19,2:19:15.05:213,15,0	./.	1/1:8,0:8:1.25:3,1,0	0/1:21,0:23:0:0,0,0	0/0:37,0:46:16.10:0,16,156	0/1:18,0:23:7.01:7,0,18	1/1:15,1:15:11.69:141,12,0	1/1:22,8:39:6.58:206,7,0	1/1:14,2:20:10.32:156,10,0	1/1:15,0:15:11.74:123,12,0	0/0:14,0:14:6.47:0,6,53	./.
chr10	31372103	.	CCCTT	C	4095.15	PASS	AB=0.833;AC=35;AF=0.700;AN=50;BaseQRankSum=1.674;DP=620;FS=19.692;HRun=0;HaplotypeScore=103.4200;InbreedingCoeff=0.7120;MQ=73.00;MQ0=8;MQRankSum=1.379;QD=10.47;ReadPosRankSum=0.697;VQSLOD=0.9981;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,7:26:27.08:389,27,0	1/1:5,3:8:9.03:136,9,0	./.	./.	1/1:16,0:17:2.51:36,3,0	0/0:22,0:22:18.05:0,18,324	0/0:21,0:21:12.04:0,12,197	./.	1/1:19,8:26:24.08:363,24,0	1/1:18,4:20:12.04:182,12,0	1/1:11,1:12:3.01:45,3,0	1/1:14,3:18:15.05:219,15,0	1/1:23,4:27:21.07:317,21,0	1/1:33,8:40:39.11:531,39,0	0/0:27,0:27:13.84:0,14,165	1/1:14,6:21:26.96:371,27,0	1/1:15,6:21:18.06:272,18,0	1/1:22,4:26:18.02:240,18,0	0/0:24,0:23:18.03:0,18,283	0/0:17,0:16:6.02:0,6,82	0/0:30,0:29:6.02:0,6,87	1/1:19,1:20:6.01:72,6,0	1/1:18,3:21:15.05:213,15,0	1/1:20,5:25:11.06:180,11,0	1/1:8,6:13:15.05:227,15,0	0/1:20,5:25:51.26:209,0,51	0/0:15,0:15:8.97:0,9,88	1/1:18,2:20:6.02:91,6,0
chr10	31372170	.	CCTGTCTGTCTGT	C	17379.69	PASS	AB=0.952;AC=45;AF=0.833;AN=54;BaseQRankSum=1.462;DP=611;FS=5.516;HRun=0;HaplotypeScore=234.5552;InbreedingCoeff=0.5090;MQ=50.58;MQ0=12;MQRankSum=-7.215;QD=33.88;ReadPosRankSum=-0.807;VQSLOD=3.9810;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:15,16:31:24.92:611,25,0	1/1:3,5:8:12.04:413,12,0	./.	0/0:17,0:5:3.01:0,3,88	1/1:4,18:22:42.14:1247,42,0	1/1:9,7:16:18.06:620,18,0	1/1:8,15:23:12.04:413,12,0	0/1:25,5:29:34.90:149,0,35	0/0:12,0:30:54.16:0,54,1273	1/1:6,20:25:57.16:1468,57,0	1/1:2,11:13:27.05:779,27,0	1/1:6,17:23:39.13:1343,39,0	1/1:7,21:27:50.88:1757,51,0	1/1:13,14:27:30.10:1014,30,0	0/0:24,0:24:66.23:0,66,3660	1/1:7,13:20:21.07:723,21,0	1/1:12,7:19:9.03:310,9,0	1/1:7,10:17:8.99:226,9,0	0/1:19,0:19:23:108,0,23	1/1:17,0:16:11.30:166,11,0	0/1:20,0:19:1.90:141,0,2	1/1:5,22:27:36.12:1186,36,0	1/1:5,14:19:26.74:911,27,0	1/1:14,10:24:8.96:310,9,0	1/1:7,21:27:48.16:1654,48,0	1/1:10,16:26:45.09:1195,45,0	1/1:22,0:21:45.95:429,46,0	1/1:3,4:7:6.02:207,6,0
chr10	31372172	.	TG	T	1220.62	PASS	AB=0.921;AC=9;AF=0.161;AN=56;BaseQRankSum=2.220;DP=600;FS=17.144;HRun=1;HaplotypeScore=184.6476;InbreedingCoeff=0.6492;MQ=51.84;MQ0=12;MQRankSum=-6.286;QD=11.41;ReadPosRankSum=1.050;VQSLOD=0.6641;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:38.48:0,38,479	0/0:8,0:8:14.58:0,15,151	0/0:26,0:9:27.03:0,27,346	0/1:18,0:6:5.45:5,0,141	0/0:22,0:22:28.40:0,28,199	0/0:16,0:16:29.42:0,29,342	0/0:23,0:23:26.64:0,27,315	0/0:29,0:28:80.95:0,81,1225	0/0:31,0:30:56.57:0,57,527	0/0:26,0:25:38.34:0,38,403	0/0:13,0:13:15.26:0,15,113	0/0:23,0:23:24.98:0,25,177	0/0:28,0:27:40.77:0,41,269	0/0:27,0:26:44.06:0,44,496	0/0:25,0:25:72.10:0,72,1123	0/0:19,0:19:17.07:0,17,242	0/1:19,0:19:1.52:2,0,262	0/0:16,0:16:24.18:0,24,323	0/1:11,5:16:99:157,0,104	1/1:5,11:16:24.46:326,24,0	1/1:12,4:15:32.72:285,33,0	0/0:27,0:27:32.15:0,32,270	0/0:18,0:18:19.47:0,19,164	0/0:24,0:24:28.20:0,28,379	0/0:28,0:27:41.70:0,42,331	0/0:26,0:26:48.96:0,49,583	1/1:2,20:21:56.62:597,57,0	0/0:7,0:7:12.14:0,12,145
chr10	31372175	.	CTGT	C	2776.88	PASS	AB=0.984;AC=27;AF=0.482;AN=56;BaseQRankSum=15.583;DP=597;FS=4.279;HRun=0;HaplotypeScore=192.1964;InbreedingCoeff=-0.4665;MQ=51.61;MQ0=12;MQRankSum=-12.711;QD=5.61;ReadPosRankSum=9.126;VQSLOD=1.7681;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:30:24.29:24,0,339	0/1:8,0:8:36.36:36,0,61	0/0:27,0:11:33.09:0,33,401	0/0:19,0:6:11.75:0,12,113	0/1:22,0:22:76.27:106,0,76	0/1:16,0:16:42.95:43,0,235	0/1:23,0:23:24.86:25,0,204	0/0:28,0:27:78.25:0,78,1006	0/1:30,0:29:51.70:52,0,274	0/1:25,0:24:99:138,0,178	0/1:13,0:13:52.07:69,0,52	0/1:20,1:21:71.26:129,0,71	0/1:26,0:25:59.01:170,0,59	0/1:27,0:26:76.25:76,0,325	0/0:26,0:26:78.27:0,78,1772	0/1:19,0:19:69.14:69,0,146	0/1:19,0:19:10.65:11,0,228	0/1:16,0:16:2.19:2,0,210	0/1:11,5:16:91.39:210,0,91	1/1:5,11:16:26.43:382,26,0	1/1:12,4:15:11.55:168,12,0	0/1:27,0:27:99:101,0,135	0/1:17,0:18:82.77:89,0,83	0/1:24,0:24:7.47:7,0,279	0/1:28,0:27:99:151,0,171	0/1:26,0:26:85.17:85,0,390	1/1:3,19:21:50.36:786,50,0	0/1:7,0:7:12.01:12,0,102
chr10	31373341	.	GACAC	G	625.52	PASS	AB=0.997;AC=9;AF=0.161;AN=56;BaseQRankSum=-1.599;DP=698;FS=3.002;HRun=0;HaplotypeScore=151.3174;InbreedingCoeff=0.2607;MQ=57.39;MQ0=9;MQRankSum=0.539;QD=3.29;ReadPosRankSum=-3.535;VQSLOD=1.9207;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:41.45:0,41,290	0/0:6,0:6:0.89:0,1,2	0/0:16,0:7:0:0,0,0	0/0:24,0:7:5.83:0,6,34	0/1:16,0:16:17.26:17,0,66	0/0:18,0:18:16.90:0,17,90	0/0:32,0:32:18.67:0,19,86	0/0:32,0:26:28.15:0,28,254	0/0:23,0:23:59.14:0,59,1107	1/1:16,14:30:42.55:408,43,0	1/1:10,1:11:3.86:220,4,0	0/0:28,0:28:35.72:0,36,169	0/0:30,0:30:28.52:0,29,171	0/0:16,0:17:22.47:0,22,124	0/0:29,0:31:45.17:0,45,1174	0/1:28,0:28:42.84:43,0,67	0/0:41,0:41:11.29:0,11,225	0/0:21,0:21:33.82:0,34,158	0/1:18,0:17:43.98:44,0,79	0/0:15,0:17:5.37:0,5,94	0/1:61,0:61:25.69:26,0,308	0/0:27,0:27:16.50:0,16,77	0/0:13,0:13:14.38:0,14,97	0/0:30,0:30:39.43:0,39,210	0/0:19,0:19:14.29:0,14,111	0/0:28,0:28:32.68:0,33,166	0/1:25,0:25:7.54:8,0,272	0/0:3,0:3:5.42:0,5,23
chr10	31373347	.	C	CAG	1791.53	PASS	AB=0.909;AC=10;AF=0.179;AN=56;BaseQRankSum=0.168;DP=724;FS=13.617;HRun=0;HaplotypeScore=137.7146;InbreedingCoeff=0.4750;MQ=56.40;MQ0=10;MQRankSum=-0.976;QD=8.33;ReadPosRankSum=2.538;VQSLOD=2.9414;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:56:60.05:0,60,381	0/0:7,0:7:15.75:0,16,124	0/0:19,0:5:11.60:0,12,77	0/0:28,0:5:14.89:0,15,116	0/0:16,0:16:15.05:0,15,98	0/0:20,0:20:22.85:0,23,172	0/1:30,1:31:9.77:10,0,72	0/1:31,0:25:24.10:24,0,377	0/0:25,0:25:72.06:0,72,913	0/0:31,0:31:36.94:0,37,366	0/0:10,0:10:13.55:0,14,139	0/0:26,0:26:20.18:0,20,146	0/0:31,0:31:25.99:0,26,248	0/0:18,0:18:14.09:0,14,73	0/0:32,0:32:58.72:0,59,933	0/0:29,0:29:22.76:0,23,95	0/0:46,0:46:58.80:0,59,370	0/0:24,0:24:35.70:0,36,187	0/1:9,9:17:62.62:300,0,63	1/1:13,2:15:22.70:206,23,0	1/1:10,50:62:49.61:887,50,0	0/0:27,0:27:21.09:0,21,100	0/0:13,0:13:18.15:0,18,129	0/0:29,0:29:31.36:0,31,199	0/0:19,0:19:26.35:0,26,208	0/1:30,0:29:84.91:85,0,158	1/1:4,23:27:12.96:439,13,0	0/0:3,0:3:3.11:0,3,7
chr10	31373361	.	CACAG	C	3660.76	PASS	AB=0.958;AC=43;AF=0.768;AN=56;BaseQRankSum=6.756;DP=741;FS=4.127;HRun=0;HaplotypeScore=153.0589;InbreedingCoeff=0.1280;MQ=58.47;MQ0=18;MQRankSum=2.419;QD=5.34;ReadPosRankSum=0.785;VQSLOD=2.1700;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:53,1:54:22.93:187,23,0	1/1:4,0:4:6.69:45,7,0	0/1:28,0:8:1.04:1,0,90	0/1:28,0:7:14.12:14,0,44	0/1:6,9:15:1.94:71,0,2	1/1:19,0:19:11.44:49,11,0	1/1:36,0:36:15.63:59,16,0	0/1:35,0:28:29.15:270,0,29	0/0:25,0:25:66.07:0,66,1303	1/1:24,0:24:23.14:206,23,0	1/1:11,0:11:20.82:165,21,0	1/1:29,0:29:30.10:140,30,0	1/1:30,0:30:28.12:162,28,0	1/1:22,0:22:15.67:70,16,0	0/0:31,0:31:31.21:0,31,1346	1/1:26,2:28:27.91:217,28,0	1/1:43,1:44:3.76:186,4,0	1/1:27,0:27:30.72:230,31,0	0/1:15,0:14:34.17:157,0,34	0/1:18,0:18:14.47:70,0,14	0/1:66,0:65:90.20:312,0,90	1/1:29,0:29:22:113,22,0	1/1:13,0:13:2.38:24,2,0	1/1:28,0:28:32.72:154,33,0	0/1:17,0:17:12.68:28,0,13	1/1:33,0:31:76.71:515,77,0	0/1:28,0:28:99:187,0,106	1/1:4,0:3:5.60:26,6,0
chr10	31373363	.	CAG	C	7343.17	PASS	AB=0.872;AC=48;AF=0.857;AN=56;BaseQRankSum=7.113;DP=734;FS=2.780;HRun=0;HaplotypeScore=124.2366;InbreedingCoeff=0.3036;MQ=59.49;MQ0=18;MQRankSum=3.452;QD=10.81;ReadPosRankSum=0.760;VQSLOD=4.6567;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,43:52:21.23:663,21,0	1/1:5,0:5:11.63:88,12,0	0/1:25,0:8:7.88:8,0,56	0/1:29,0:8:17.54:18,0,24	1/1:12,2:14:15:164,15,0	1/1:2,17:19:3.49:155,3,0	1/1:2,36:38:11.44:220,11,0	0/1:34,1:28:22:323,0,22	0/0:23,0:23:25.42:0,25,855	1/1:25,0:25:25.20:225,25,0	1/1:11,0:11:15.26:144,15,0	1/1:2,26:28:32.81:501,33,0	1/1:5,25:30:16.28:406,16,0	1/1:2,19:21:17.93:273,18,0	0/0:32,0:32:33.85:0,34,930	1/1:4,24:28:30.02:412,30,0	1/1:7,37:44:2.94:527,3,0	1/1:5,22:27:12.71:571,13,0	1/1:16,0:15:1.80:125,2,0	1/1:17,0:17:8.60:89,9,0	1/1:64,0:63:56.11:314,56,0	1/1:3,26:29:17.93:313,18,0	1/1:2,11:13:4:129,4,0	1/1:3,24:27:28.10:494,28,0	0/1:1,16:17:11.96:125,0,12	1/1:2,31:31:78.80:793,79,0	1/1:28,0:28:21.19:175,21,0	1/1:1,3:3:6.02:91,6,0
chr10	31373365	.	GACAC	G	7093.49	PASS	AB=0.870;AC=46;AF=0.821;AN=56;BaseQRankSum=3.247;DP=736;FS=0.489;HRun=0;HaplotypeScore=145.1161;InbreedingCoeff=0.6884;MQ=60.99;MQ0=17;MQRankSum=0.881;QD=11.37;ReadPosRankSum=2.113;VQSLOD=4.5393;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:51,1:52:52.71:423,53,0	1/1:5,0:5:8.96:111,9,0	0/0:29,0:11:23.07:0,23,332	0/0:29,0:8:16.79:0,17,167	1/1:14,0:14:14.97:127,15,0	1/1:19,0:19:14.72:101,15,0	1/1:38,0:38:21.14:155,21,0	1/1:17,15:26:44.94:565,45,0	0/0:21,0:23:65.68:0,66,1344	1/1:26,0:26:29.27:383,29,0	1/1:10,1:11:17.98:220,18,0	1/1:28,0:28:35.29:280,35,0	1/1:27,2:29:32.46:293,32,0	1/1:20,0:20:17.66:133,18,0	0/0:30,0:31:53.09:0,53,1438	1/1:27,1:28:29.63:270,30,0	1/1:42,1:43:41.79:347,42,0	1/1:24,3:27:49.86:451,50,0	1/1:17,0:16:25.91:374,26,0	0/1:11,6:17:64.02:70,0,64	1/1:68,0:67:63.58:960,64,0	1/1:28,1:29:23.87:209,24,0	1/1:12,0:12:8.82:61,9,0	1/1:26,0:26:35.49:294,35,0	1/1:17,0:17:8.88:70,9,0	1/1:33,0:31:57.51:679,58,0	0/1:29,0:29:83.94:472,0,84	1/1:4,0:3:5.98:47,6,0
chr10	31373899	.	TTGTGTGTGTGTGTGTGTGTGTGTGTGTG	T	10131.37	PASS	AB=0.897;AC=29;AF=0.537;AN=54;BaseQRankSum=8.203;DP=597;FS=18.600;HRun=0;HaplotypeScore=363.4193;InbreedingCoeff=0.6410;MQ=62.69;MQ0=16;MQRankSum=-6.051;QD=28.46;ReadPosRankSum=2.414;VQSLOD=1.8695;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:28,5:33:99:206,0,183	1/1:6,1:8:6.02:411,6,0	0/0:30,0:17:6.02:0,6,199	0/0:27,0:16:18.06:0,18,609	1/1:18,5:23:12.04:821,12,0	1/1:12,7:19:11.88:863,12,0	1/1:24,0:24:15.01:208,15,0	0/1:34,0:32:65.26:65,0,175	0/0:20,0:19:33.11:0,33,3201	0/0:27,0:25:44.89:0,45,3956	0/0:10,0:9:12.04:0,12,907	1/1:13,6:20:18.06:1275,18,0	1/1:13,9:20:12.04:864,12,0	1/1:21,6:26:9.03:648,9,0	0/0:18,0:17:30.10:0,30,2567	1/1:15,5:20:9.02:648,9,0	0/0:12,5:17:2.74:0,3,12	1/1:18,2:18:6.01:432,6,0	0/0:15,0:13:17.05:0,17,623	0/0:14,0:15:21.06:0,21,1357	0/0:37,0:33:36.59:0,37,2667	1/1:15,9:24:12.04:848,12,0	1/1:11,5:16:3.01:191,3,0	1/1:17,4:21:9.03:646,9,0	1/1:6,10:17:21.07:1474,21,0	0/1:22,6:28:6.75:530,0,7	0/0:12,0:13:19.62:0,20,1503	./.
chr10	31374667	.	C	CG	3042.20	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-10.083;DP=581;FS=0.441;HRun=3;HaplotypeScore=54.6805;InbreedingCoeff=0.9590;MQ=85.41;MQ0=0;MQRankSum=0.265;QD=31.04;ReadPosRankSum=1.281;VQSLOD=3.3818;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,120,1371	0/0:4,0:4:12.04:0,12,143	0/0:16,0:16:48.15:0,48,574	0/0:20,0:20:47.28:0,47,577	0/0:14,0:14:42.12:0,42,492	0/0:25,0:25:72.22:0,72,862	0/0:25,0:25:72.12:0,72,815	0/0:25,0:25:69.16:0,69,800	0/0:20,0:20:57.17:0,57,682	0/0:15,0:15:39.12:0,39,466	0/0:13,0:13:39.12:0,39,467	0/0:14,0:14:36.10:0,36,420	0/0:19,0:19:51.11:0,51,598	0/0:16,0:16:45.12:0,45,527	0/0:17,0:17:42.09:0,42,487	0/0:15,0:15:39.12:0,39,468	0/0:70,0:70:99:0,192,2219	0/0:30,0:30:81.15:0,81,937	1/1:2,14:16:45.08:571,45,0	1/1:1,7:8:20.86:264,21,0	1/1:5,51:56:99:1908,138,0	0/0:8,0:8:24.07:0,24,288	0/0:7,0:7:18.05:0,18,215	0/0:38,0:38:99:0,99,1106	0/0:12,0:12:33.07:0,33,373	0/0:12,0:12:33.10:0,33,395	1/1:2,15:17:33.11:459,33,0	0/0:2,0:2:6.02:0,6,72
chr10	31374897	.	G	GA	6311.93	PASS	AB=0.739;AC=46;AF=0.821;AN=56;BaseQRankSum=-3.654;DP=518;FS=2.627;HRun=11;HaplotypeScore=71.3760;InbreedingCoeff=0.4046;MQ=58.18;MQ0=8;MQRankSum=-1.557;QD=13.20;ReadPosRankSum=0.561;VQSLOD=5.0580;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,25:37:17.12:533,17,0	1/1:3,7:10:21.04:213,21,0	0/1:12,0:7:1.57:2,0,54	0/1:9,0:5:3.06:3,0,39	1/1:4,17:21:42.01:405,42,0	0/1:10,12:21:2.25:317,0,2	1/1:4,16:20:15.84:342,16,0	1/1:11,12:24:27.55:313,28,0	0/0:17,1:16:41.81:0,42,324	1/1:7,18:25:42.08:426,42,0	1/1:4,3:7:6.01:61,6,0	1/1:2,10:12:11.98:111,12,0	1/1:6,14:17:15.80:331,16,0	1/1:5,12:17:35.90:338,36,0	0/0:21,0:22:37.86:0,38,282	1/1:4,9:13:21.04:214,21,0	1/1:7,23:31:13.48:485,13,0	1/1:2,20:22:42.08:426,42,0	1/1:7,0:16:33.40:227,33,0	1/1:11,1:17:8.28:34,8,0	1/1:7,0:16:12.31:59,12,0	0/1:7,9:15:16.41:214,0,16	1/1:7,4:12:11.86:106,12,0	0/1:3,18:21:6.11:349,0,6	0/1:6,11:17:5.20:134,0,5	1/1:8,17:25:18.77:346,19,0	1/1:11,0:26:34.06:173,34,0	1/1:1,6:7:15.03:152,15,0
chr10	31377431	.	GAACAACAACAACAAC	G	8154.06	PASS	AB=0.588;AC=35;AF=0.673;AN=52;BaseQRankSum=4.997;DP=625;FS=2.008;HRun=0;HaplotypeScore=209.5276;InbreedingCoeff=0.8123;MQ=72.20;MQ0=5;MQRankSum=-6.527;QD=20.33;ReadPosRankSum=-0.691;VQSLOD=4.0128;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:20,17:37:10.50:154,11,0	1/1:1,8:9:12.04:495,12,0	./.	./.	1/1:12,10:22:26.77:374,27,0	0/1:3,7:10:18.90:87,0,19	1/1:5,21:26:18.06:657,18,0	1/1:28,6:34:18.04:224,18,0	0/0:10,0:17:18.06:0,18,722	0/0:19,0:23:20.72:0,21,241	0/0:10,0:14:8.89:0,9,96	1/1:6,21:27:20.40:815,20,0	1/1:8,13:21:6.02:248,6,0	1/1:6,13:19:15.04:586,15,0	0/0:26,0:26:45.15:0,45,2778	1/1:12,15:27:21.07:867,21,0	1/1:9,19:28:15.05:619,15,0	1/1:8,9:17:9.45:491,9,0	0/0:9,0:17:24.08:0,24,1097	0/0:7,0:12:15.05:0,15,663	0/0:11,0:27:42.14:0,42,1739	1/1:7,17:23:25.67:576,26,0	1/1:8,4:12:6.02:161,6,0	1/1:18,19:37:9.03:339,9,0	1/1:7,9:16:12.04:409,12,0	1/1:9,8:17:24.07:682,24,0	0/0:13,0:31:49.09:0,49,1901	1/1:4,14:16:9.03:371,9,0
chr10	31381874	.	AT	A	1992.94	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=9.326;DP=476;FS=4.922;HRun=8;HaplotypeScore=49.0209;InbreedingCoeff=0.9050;MQ=74.14;MQ0=0;MQRankSum=1.219;QD=19.73;ReadPosRankSum=0.848;VQSLOD=3.4918;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:54.15:0,54,638	0/0:9,0:9:24.07:0,24,290	0/0:17,0:17:34.84:0,35,405	0/1:10,0:10:8.46:8,0,112	0/0:19,0:19:51.16:0,51,616	0/0:17,0:17:48.13:0,48,567	0/0:17,0:17:45.14:0,45,542	0/0:37,0:37:93.25:0,93,1091	0/0:15,0:15:39.06:0,39,432	1/1:2,18:20:54.07:517,54,0	1/1:2,11:13:33.05:319,33,0	0/0:17,0:17:45.12:0,45,524	0/0:21,0:21:54.14:0,54,629	0/0:11,0:11:27.07:0,27,315	0/0:12,0:12:33.09:0,33,387	0/0:11,0:11:33.10:0,33,399	0/0:38,0:38:99:0,114,1341	0/0:24,0:24:69.21:0,69,833	1/1:3,14:17:18.48:355,18,0	1/1:1,18:19:50.90:462,51,0	1/1:3,8:11:24.04:232,24,0	0/0:10,0:10:30.08:0,30,350	0/0:14,0:14:39.12:0,39,471	0/0:17,0:17:48.14:0,48,569	0/0:16,0:16:45.13:0,45,534	0/0:24,2:26:14.25:0,14,727	1/1:0,11:11:30.05:290,30,0	0/0:8,0:8:24.07:0,24,289
chr10	31382938	.	T	TCACAAACA	2469.20	PASS	AB=0.886;AC=19;AF=0.339;AN=56;BaseQRankSum=4.336;DP=627;FS=1.497;HRun=0;HaplotypeScore=201.7413;InbreedingCoeff=-0.1936;MQ=69.93;MQ0=12;MQRankSum=-3.754;QD=7.26;ReadPosRankSum=-3.368;VQSLOD=1.9115;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:45:48.92:0,49,455	0/1:6,0:8:46.67:47,0,57	0/0:34,0:19:41.08:0,41,441	0/0:40,0:30:77.55:0,78,749	0/0:13,0:19:23.72:0,24,190	0/1:31,0:30:99:207,0,177	0/1:33,0:33:99:170,0,340	0/0:27,0:27:37.75:0,38,559	0/0:24,0:26:62.68:0,63,775	1/1:5,16:20:47.85:540,48,0	1/1:13,0:13:29.99:338,30,0	0/1:17,0:25:99:236,0,148	0/1:7,0:11:41.53:64,0,42	0/1:8,0:11:27.92:28,0,146	0/0:20,0:25:57.04:0,57,959	0/1:22,0:27:14.48:14,0,294	0/1:26,0:28:99:262,0,213	0/1:23,0:32:99:138,0,253	0/0:14,0:14:25.94:0,26,205	0/0:13,0:19:41.91:0,42,495	0/0:20,0:24:53.91:0,54,577	0/1:12,0:12:62.58:63,0,127	0/1:15,0:15:85.30:175,0,85	0/1:19,0:26:67.94:68,0,206	0/1:16,0:17:53.34:53,0,185	0/1:20,0:20:99:164,0,274	0/0:9,0:12:29.94:0,30,379	0/1:6,0:6:34.91:74,0,35
chr10	31383260	.	G	GA	20713.36	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-13.790;DP=696;FS=6.750;HRun=4;HaplotypeScore=65.4528;InbreedingCoeff=0.9861;MQ=78.44;MQ0=0;MQRankSum=-3.318;QD=36.34;ReadPosRankSum=2.322;VQSLOD=5.2663;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,46:50:99:1682,123,0	1/1:1,5:6:9.03:123,9,0	0/0:15,0:16:38.12:0,38,392	0/0:18,0:18:41.67:0,42,429	1/1:1,11:12:30.10:410,30,0	1/1:1,14:15:36.12:492,36,0	1/1:1,26:27:69.23:944,69,0	1/1:1,26:27:78.25:1052,78,0	0/0:34,0:34:99:0,99,1113	0/0:26,0:25:66.19:0,66,748	0/0:8,0:8:24.07:0,24,272	1/1:1,30:31:84.28:1149,84,0	1/1:1,28:29:78.26:1067,78,0	1/1:3,30:33:87.29:1185,87,0	0/0:24,0:24:69.20:0,69,783	1/1:2,25:27:72.24:985,72,0	1/1:2,30:32:90.30:1231,90,0	1/1:0,29:29:84.28:1149,84,0	1/1:0,25:25:75.22:992,75,0	1/1:0,15:15:42.10:553,42,0	1/1:2,54:57:99:2077,153,0	1/1:2,16:19:48.63:654,49,0	1/1:1,13:14:33.11:451,33,0	1/1:1,32:33:90.30:1231,90,0	1/1:0,23:23:63.21:860,63,0	1/1:2,32:34:96.29:1279,96,0	1/1:1,24:25:66.22:901,66,0	1/1:0,7:7:18.06:246,18,0
chr10	31385553	.	CT	C	2334.44	PASS	AB=0.675;AC=34;AF=0.607;AN=56;BaseQRankSum=-0.054;DP=570;FS=1.073;HRun=16;HaplotypeScore=77.0828;InbreedingCoeff=0.2367;MQ=74.19;MQ0=1;MQRankSum=0.341;QD=5.11;ReadPosRankSum=6.203;VQSLOD=2.1575;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:14,14:31:16.69:175,17,0	1/1:1,5:7:10.83:60,11,0	0/0:17,1:13:12.99:0,13,68	0/0:14,0:15:8.66:0,9,97	1/1:13,14:33:14.78:144,15,0	1/1:7,10:20:26.58:143,27,0	1/1:13,9:22:24.52:137,25,0	0/1:12,13:27:4.83:167,0,5	0/0:10,2:16:8.78:0,9,55	0/0:11,0:20:27.31:0,27,155	0/0:16,0:19:43.68:0,44,268	0/1:6,5:12:5.48:76,0,5	0/1:11,10:25:5.60:61,0,6	0/1:7,10:17:8.49:72,0,8	0/0:24,0:24:26.94:0,27,219	1/1:3,13:17:25.44:149,25,0	1/1:9,19:30:44.91:263,45,0	0/1:12,6:21:35.62:93,0,36	1/1:20,8:28:5.24:109,5,0	0/1:13,10:26:7.99:111,0,8	0/1:9,7:18:17.88:92,0,18	1/1:5,13:19:27.74:166,28,0	0/1:9,5:15:24.88:25,0,52	1/1:10,10:20:17.31:107,17,0	1/1:5,10:16:0.20:106,0,0	0/1:14,6:20:30.60:38,0,31	1/1:6,16:24:11.54:180,12,0	0/1:4,3:8:7.65:46,0,8
chr10	31386130	.	GA	G	2059.94	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-4.088;DP=756;FS=6.644;HRun=2;HaplotypeScore=164.8357;InbreedingCoeff=0.9843;MQ=73.99;MQ0=0;MQRankSum=-1.967;QD=34.91;ReadPosRankSum=-0.275;VQSLOD=2.5107;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:87.29:0,87,1304	0/0:16,0:16:45.15:0,45,675	0/0:18,0:18:42.70:0,43,551	0/0:8,0:8:12.03:0,12,178	0/0:40,0:40:99:0,114,1705	0/0:39,0:39:99:0,114,1670	0/0:24,0:24:72.24:0,72,1079	0/0:23,0:23:69.22:0,69,995	0/0:28,0:28:81.27:0,81,1208	1/1:0,28:28:84.27:1091,84,0	1/1:2,29:31:84.27:1091,84,0	0/0:20,0:20:57.15:0,57,829	0/0:23,0:23:66.21:0,66,966	0/0:24,0:24:66.22:0,66,989	0/0:25,0:25:75.24:0,75,1098	0/0:23,0:22:69.22:0,69,998	0/0:27,0:27:78.26:0,78,1168	0/0:23,0:23:60.20:0,60,899	0/0:26,0:26:75.24:0,75,1093	0/0:37,0:37:99:0,111,1607	0/0:22,0:22:66.20:0,66,967	0/0:30,0:30:90.29:0,90,1323	0/0:28,0:28:84.27:0,84,1223	0/0:31,0:31:90.30:0,90,1344	0/0:34,0:33:99:0,99,1481	0/0:37,1:38:72.41:0,72,1580	0/0:36,0:36:99:0,108,1589	0/0:24,0:24:72.24:0,72,1079
chr10	31386159	.	GA	G	13054.97	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=2.726;DP=742;FS=0.000;HRun=10;HaplotypeScore=119.8998;InbreedingCoeff=0.9966;MQ=71.74;MQ0=0;MQRankSum=-3.055;QD=21.54;ReadPosRankSum=2.169;VQSLOD=4.0391;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,24:25:65.99:573,66,0	1/1:2,14:17:38.02:318,38,0	0/0:20,0:19:36.75:0,37,359	0/0:11,0:11:14.90:0,15,184	1/1:4,31:35:86.97:755,87,0	1/1:4,32:36:59.80:748,60,0	1/1:4,25:29:65.96:573,66,0	1/1:3,31:34:89.95:776,90,0	0/0:22,0:22:66.17:0,66,724	0/0:30,0:30:78.20:0,78,856	0/0:23,0:23:66.18:0,66,730	1/1:2,20:22:56.98:495,57,0	1/1:2,19:21:53.97:469,54,0	1/1:3,23:26:53.98:469,54,0	0/0:28,1:29:58.17:0,58,870	1/1:1,24:25:71.99:625,72,0	1/1:4,24:30:67.03:559,67,0	1/1:3,17:20:47.98:417,48,0	1/1:5,17:22:50.96:436,51,0	1/1:5,38:43:99:938,108,0	1/1:3,16:19:47.99:417,48,0	1/1:2,28:30:80.98:703,81,0	1/1:1,23:25:62.02:527,62,0	1/1:2,30:32:83.98:729,84,0	1/1:5,22:27:65:553,65,0	1/1:2,27:29:77.91:666,78,0	1/1:4,34:38:96.45:835,96,0	1/1:1,18:20:56.02:475,56,0
chr10	31387260	.	TTGTTA	T	21156.59	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=10.190;DP=585;FS=25.383;HRun=0;HaplotypeScore=115.5664;InbreedingCoeff=0.9856;MQ=59.94;MQ0=1;MQRankSum=-5.164;QD=47.65;ReadPosRankSum=4.043;VQSLOD=2.9305;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,29:30:66.22:1371,66,0	1/1:0,7:7:21.07:424,21,0	0/0:19,0:14:39.13:0,39,1130	0/0:27,0:25:72.22:0,72,2012	1/1:3,25:28:63.21:1241,63,0	1/1:2,19:20:39.13:830,39,0	1/1:1,15:14:30.10:635,30,0	1/1:6,19:25:57.18:1121,57,0	0/0:23,0:23:69.21:0,69,1920	0/0:26,0:25:72.25:0,72,2154	0/0:16,0:16:48.15:0,48,1310	1/1:1,24:25:57.20:1204,57,0	1/1:0,10:10:27.09:574,27,0	1/1:0,8:8:12.04:256,12,0	0/0:29,0:29:87.30:0,87,2682	1/1:1,22:23:51.18:1083,51,0	1/1:2,31:32:81.28:1702,81,0	1/1:0,33:33:69.24:1458,69,0	1/1:4,7:10:21.07:390,21,0	1/1:0,26:26:78.22:1568,78,0	1/1:5,21:26:48.16:1023,48,0	1/1:0,22:22:51.18:1083,51,0	1/1:1,19:19:45.14:880,45,0	1/1:4,15:19:51.17:1044,51,0	1/1:1,20:21:54.19:1149,54,0	1/1:1,16:15:42.13:843,42,0	1/1:0,17:17:48.16:1022,48,0	1/1:2,4:6:12.04:256,12,0
chr10	31387356	.	GAAGA	G	178.82	PASS	AB=0.971;AC=13;AF=0.271;AN=48;BaseQRankSum=0.150;DP=503;FS=7.971;HRun=0;HaplotypeScore=109.6202;InbreedingCoeff=0.2310;MQ=57.18;MQ0=4;MQRankSum=-0.970;QD=1.10;ReadPosRankSum=0.715;VQSLOD=1.5511;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:14:4.29:0,4,23	1/1:8,0:8:0.83:4,1,0	./.	./.	0/0:28,0:28:11.42:0,11,61	1/1:21,0:20:13.48:61,13,0	0/1:18,0:17:14.73:15,0,33	./.	1/1:11,10:21:12.03:165,12,0	0/0:19,0:15:15.52:0,16,114	0/1:14,0:14:5.89:6,0,19	0/0:24,0:23:3.23:0,3,9	0/0:14,0:14:11.96:0,12,122	0/0:19,0:19:9.54:0,10,42	0/0:18,0:18:21.07:0,21,488	0/0:18,0:17:0.01:0,0,3	0/1:10,0:11:3.20:3,0,28	0/0:17,0:19:3.50:0,3,49	./.	1/1:23,0:23:5.51:18,6,0	0/0:9,0:9:2.84:0,3,14	0/0:17,0:16:4.49:0,4,35	0/0:18,0:18:6.69:0,7,31	0/0:17,0:16:11.80:0,12,63	0/1:24,0:24:15.05:15,0,65	0/0:17,0:17:7.03:0,7,97	0/1:22,0:21:23.62:27,0,24	0/0:5,0:4:3.11:0,3,8
chr10	31387403	.	GAAAGAAA	G	3865.84	PASS	AB=1.000;AC=37;AF=0.661;AN=56;BaseQRankSum=5.829;DP=389;FS=13.578;HRun=0;HaplotypeScore=135.5333;InbreedingCoeff=0.2120;MQ=40.19;MQ0=7;MQRankSum=-5.231;QD=12.35;ReadPosRankSum=-0.950;VQSLOD=2.0784;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:21,0:18:68.52:69,0,228	1/1:7,0:7:5.53:92,6,0	0/0:12,0:5:15.05:0,15,204	0/0:10,0:2:5.05:0,5,48	0/1:19,0:19:12.32:225,0,12	1/1:11,0:11:21.07:372,21,0	1/1:12,0:7:14.73:172,15,0	1/1:9,0:3:5.65:31,6,0	0/0:26,0:26:54.01:0,54,646	1/1:18,0:14:14.13:327,14,0	1/1:17,0:16:35.81:398,36,0	1/1:9,0:9:4.25:116,4,0	0/1:12,0:11:78.33:93,0,78	1/1:17,0:16:15.07:81,15,0	0/0:22,0:22:66.22:0,66,1502	1/1:14,0:12:15.72:130,16,0	0/1:13,0:12:38.12:133,0,38	0/1:13,0:11:99:102,0,112	1/1:8,0:7:6.96:85,7,0	1/1:12,0:13:18.04:256,18,0	0/1:7,0:3:0.38:0,0,53	1/1:6,10:15:23.84:261,24,0	1/1:13,0:13:8.39:126,8,0	0/1:17,0:15:74.20:74,0,138	0/1:18,0:18:28.71:276,0,29	0/1:15,0:15:80.46:126,0,80	1/1:6,0:11:23.72:320,24,0	0/0:6,0:5:4.74:0,5,16
chr10	31387406	.	A	AG	1648.54	PASS	AB=0.985;AC=31;AF=0.554;AN=56;BaseQRankSum=6.805;DP=398;FS=9.529;HRun=1;HaplotypeScore=117.4841;InbreedingCoeff=-0.0670;MQ=39.88;MQ0=8;MQRankSum=-7.048;QD=5.28;ReadPosRankSum=-0.579;VQSLOD=-0.5375;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:20:11.98:12,0,174	0/1:7,0:7:6.19:28,0,6	0/0:13,0:5:8.38:0,8,150	0/1:11,0:2:0.80:1,0,34	0/1:17,1:18:43.86:61,0,44	1/1:11,1:11:20.01:195,20,0	1/1:10,1:6:11.98:107,12,0	1/1:9,0:3:3.85:22,4,0	0/0:26,0:26:47.90:0,48,551	0/1:16,2:14:22.94:192,0,23	0/1:18,0:17:9.84:197,0,10	0/1:8,0:8:13.08:39,0,13	0/1:11,0:10:13.71:19,0,14	1/1:17,0:16:8.95:64,9,0	0/0:23,0:23:66.20:0,66,841	0/1:15,0:13:26.09:38,0,26	0/1:12,1:12:16.61:108,0,17	0/1:14,0:12:81.96:82,0,115	1/1:9,0:8:2.17:13,2,0	1/1:14,0:13:17.93:172,18,0	0/1:7,0:3:1.13:1,0,46	1/1:16,0:14:16.79:113,17,0	0/1:13,0:13:6.70:7,0,17	0/0:17,0:15:7.08:0,7,134	0/1:18,0:18:89.23:89,0,112	0/1:16,0:16:65.05:65,0,119	1/1:12,0:11:21:195,21,0	0/0:6,0:5:4.59:0,5,15
chr10	31387407	.	GAAA	G	5798.25	PASS	AB=0.959;AC=43;AF=0.768;AN=56;BaseQRankSum=5.288;DP=409;FS=14.806;HRun=6;HaplotypeScore=115.9783;InbreedingCoeff=0.4187;MQ=39.68;MQ0=8;MQRankSum=-2.883;QD=17.46;ReadPosRankSum=-1.756;VQSLOD=0.9162;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:24,1:20:99:140,0,257	1/1:3,4:7:11.99:180,12,0	0/0:14,0:5:15.05:0,15,204	0/0:13,0:2:5.05:0,5,48	1/1:17,3:19:28.73:486,29,0	1/1:4,8:11:21.07:303,21,0	1/1:11,2:8:8.98:113,9,0	1/1:10,0:4:8.60:50,9,0	0/0:26,0:26:40.76:0,41,572	1/1:17,0:13:30.23:346,30,0	1/1:18,0:17:38.55:376,39,0	1/1:9,0:9:24.02:284,24,0	1/1:11,0:10:17.35:164,17,0	1/1:8,9:16:19.27:199,19,0	0/0:24,0:24:72.23:0,72,1173	1/1:11,4:13:22.49:243,22,0	0/1:13,0:12:53.56:69,0,54	0/1:14,1:13:99:251,0,110	1/1:2,7:8:9.94:106,10,0	1/1:15,0:14:20.96:243,21,0	0/1:7,0:3:22.15:22,0,74	1/1:15,1:14:17.97:230,18,0	1/1:11,2:13:30.01:385,30,0	0/1:15,2:15:99:191,0,109	1/1:17,1:18:44.79:541,45,0	1/1:14,3:16:33.82:478,34,0	1/1:12,0:11:24.06:313,24,0	1/1:6,0:5:6.02:84,6,0
chr10	31387410	.	A	AG	5268.05	PASS	AB=0.867;AC=43;AF=0.768;AN=56;BaseQRankSum=5.482;DP=410;FS=12.658;HRun=0;HaplotypeScore=113.1547;InbreedingCoeff=0.4194;MQ=39.68;MQ0=4;MQRankSum=-2.339;QD=15.92;ReadPosRankSum=-2.378;VQSLOD=5.5987;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:20,3:19:99:119,0,247	1/1:5,3:8:11.95:137,12,0	0/0:14,0:5:15.05:0,15,204	0/0:14,0:3:4.56:0,5,46	1/1:11,9:18:28.78:452,29,0	1/1:11,1:11:21.95:258,22,0	1/1:9,3:7:11.97:107,12,0	1/1:7,1:5:8.67:51,9,0	0/0:27,0:27:60.04:0,60,706	1/1:7,12:15:36.39:396,36,0	1/1:9,7:17:33.91:341,34,0	1/1:6,5:10:24:264,24,0	1/1:0,10:9:18.03:242,18,0	1/1:11,5:16:19.75:231,20,0	0/0:24,0:24:72.23:0,72,990	1/1:7,9:13:22.42:181,22,0	0/1:13,0:12:57.44:66,0,57	0/1:13,2:13:92.42:219,0,92	1/1:9,0:8:9.94:109,10,0	1/1:17,0:16:21.75:190,22,0	0/1:5,1:3:35.72:36,0,74	1/1:12,4:14:17.97:212,18,0	1/1:4,10:13:29.99:359,30,0	0/1:11,6:15:99:180,0,104	1/1:9,8:17:45.15:402,45,0	1/1:13,3:15:41.77:380,42,0	1/1:10,1:10:24.04:253,24,0	1/1:0,6:5:6.02:84,6,0
chr10	31387411	.	A	AGG	1557.48	PASS	AB=1.000;AC=27;AF=0.482;AN=56;BaseQRankSum=-0.200;DP=427;FS=9.308;HRun=0;HaplotypeScore=137.8299;InbreedingCoeff=0.0195;MQ=39.37;MQ0=4;MQRankSum=-2.558;QD=5.30;ReadPosRankSum=-0.890;VQSLOD=2.6422;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:19:7.20:0,7,332	1/1:9,0:9:3.65:40,4,0	0/0:14,0:5:15.05:0,15,243	0/0:16,0:3:5.89:0,6,64	0/1:20,0:18:12.75:166,0,13	0/1:12,0:11:3.38:97,0,3	1/1:14,0:7:5.08:24,5,0	0/0:8,0:5:9.87:0,10,86	0/0:27,0:27:60.18:0,60,891	0/1:22,0:18:3.12:288,0,3	0/1:17,0:17:39.78:84,0,40	0/1:12,0:11:40.60:56,0,41	0/0:12,0:11:9.68:0,10,32	0/1:16,0:15:59.29:83,0,59	0/0:25,0:25:72.25:0,72,1173	0/1:17,0:14:7.18:7,0,88	0/1:12,0:11:27.22:27,0,146	0/1:14,0:12:76.74:77,0,175	1/1:8,1:8:8.36:56,8,0	1/1:16,2:17:14.80:87,15,0	0/0:7,0:4:8.52:0,9,106	0/1:16,0:14:10.65:20,0,11	1/1:15,0:14:17.82:160,18,0	0/1:18,0:16:45.51:46,0,176	0/1:20,0:20:99:114,0,127	0/1:15,0:14:99:109,0,110	1/1:9,2:11:13.85:129,14,0	1/1:6,0:5:6.01:63,6,0
chr10	31387581	.	AAG	A	16171.92	PASS	AB=0.588;AC=47;AF=0.839;AN=56;BaseQRankSum=6.043;DP=627;FS=4.576;HRun=0;HaplotypeScore=104.7418;InbreedingCoeff=0.9193;MQ=59.21;MQ0=8;MQRankSum=-0.791;QD=33.00;ReadPosRankSum=2.122;VQSLOD=6.8541;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:6,14:19:1.18:490,0,1	1/1:1,14:15:33.11:453,33,0	0/0:35,0:11:20.21:0,20,326	0/0:46,0:16:22.49:0,22,254	1/1:3,20:23:54.08:714,54,0	1/1:0,12:12:33.11:453,33,0	1/1:2,16:18:36.73:500,37,0	1/1:5,27:31:77.89:947,78,0	0/0:17,0:17:45.14:0,45,762	1/1:1,26:27:78.26:1069,78,0	1/1:1,18:19:54.09:717,54,0	1/1:1,14:14:33.11:452,33,0	1/1:0,16:16:45.15:617,45,0	1/1:2,20:21:48.16:659,48,0	0/0:34,0:34:93.30:0,93,1608	1/1:1,21:22:54.18:737,54,0	1/1:7,17:23:43.15:722,43,0	1/1:6,16:22:59.91:755,60,0	1/1:4,17:20:48.10:615,48,0	1/1:1,26:27:78.26:1071,78,0	1/1:1,15:16:39.13:535,39,0	1/1:0,20:19:54.14:715,54,0	1/1:2,14:16:39.08:513,39,0	1/1:3,15:18:36.12:494,36,0	1/1:1,19:20:45.15:618,45,0	1/1:1,23:24:69.17:925,69,0	1/1:2,16:17:45.11:597,45,0	1/1:0,23:23:60.17:803,60,0
chr10	31388167	.	TCTTC	T	7755.58	PASS	AB=0.661;AC=29;AF=0.558;AN=52;BaseQRankSum=0.918;DP=744;FS=5.862;HRun=0;HaplotypeScore=197.8946;InbreedingCoeff=0.7448;MQ=61.10;MQ0=5;MQRankSum=0.204;QD=17.23;ReadPosRankSum=3.289;VQSLOD=4.2804;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:45.15:0,45,983	1/1:4,6:10:15.05:232,15,0	./.	./.	1/1:10,11:21:21.03:298,21,0	1/1:8,19:27:42.14:651,42,0	1/1:21,12:33:19.88:284,20,0	1/1:32,5:35:15.01:176,15,0	0/0:12,0:19:18.06:0,18,282	0/0:19,0:30:42.11:0,42,602	0/0:11,0:23:42.14:0,42,673	1/1:14,16:29:27.09:418,27,0	1/1:16,12:28:33.11:506,33,0	1/1:12,19:31:49.41:787,49,0	0/0:29,0:38:24.06:0,24,324	0/0:29,0:30:57.65:0,58,1249	0/1:16,13:29:24.78:429,0,25	1/1:14,8:22:15.05:232,15,0	0/0:20,0:22:9.03:0,9,154	0/0:8,0:17:21.07:0,21,278	0/0:33,0:33:19.31:0,19,299	0/1:13,14:27:34.37:474,0,34	0/1:11,15:26:11.52:606,0,12	1/1:17,26:43:57.19:881,57,0	1/1:10,18:28:36.12:558,36,0	1/1:11,21:32:10.81:850,11,0	0/0:20,0:30:36.12:0,36,596	1/1:11,14:25:24.08:372,24,0
chr10	31388871	.	A	AGGTTCC	42600.77	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-6.286;DP=652;FS=9.373;HRun=0;HaplotypeScore=137.2719;InbreedingCoeff=0.9805;MQ=78.36;MQ0=0;MQRankSum=-15.565;QD=80.38;ReadPosRankSum=0.346;VQSLOD=5.8802;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,14:31:63.21:2090,63,0	1/1:3,8:11:33.11:1196,33,0	0/0:20,0:20:60.19:0,60,1248	0/0:26,0:26:66.17:0,66,1492	1/1:2,7:11:24.08:642,24,0	1/1:1,15:19:45.15:1672,45,0	1/1:10,26:44:87.30:3072,87,0	1/1:6,24:32:93.31:3101,93,0	0/0:38,0:38:12.98:0,13,2536	1/1:2,8:16:42.11:1270,42,0	1/1:4,4:10:24.08:603,24,0	1/1:3,38:44:99:4299,120,0	1/1:1,29:32:84.29:3131,84,0	1/1:3,30:36:84.29:3021,84,0	0/0:38,0:38:99:0,114,2872	1/1:1,18:21:51.18:1878,51,0	1/1:2,19:29:54.19:1932,54,0	1/1:1,13:17:33.11:1228,33,0	1/1:2,13:18:48.15:1592,48,0	1/1:0,5:6:18.02:465,18,0	1/1:15,24:43:87.25:2697,87,0	1/1:1,10:13:29.86:1046,30,0	1/1:3,5:11:27.09:921,27,0	1/1:3,19:25:39.43:1381,39,0	1/1:1,11:14:39.13:1416,39,0	1/1:3,10:16:45.13:1406,45,0	1/1:1,22:26:60.21:2207,60,0	1/1:2,2:5:12.04:335,12,0
chr10	31393193	.	TCACACACA	T	1587.33	PASS	AB=0.871;AC=27;AF=0.540;AN=50;BaseQRankSum=4.452;DP=580;FS=24.211;HRun=0;HaplotypeScore=148.3517;InbreedingCoeff=0.4499;MQ=65.00;MQ0=15;MQRankSum=-4.833;QD=5.45;ReadPosRankSum=-1.498;VQSLOD=0.8607;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:28:0.88:2,1,0	1/1:4,0:4:5.93:67,6,0	./.	0/0:53,0:37:0.89:0,1,2	1/1:11,0:11:6.01:94,6,0	1/1:15,0:17:3.01:56,3,0	1/1:23,0:27:2.75:56,3,0	0/0:18,0:16:2.22:0,2,7	0/0:17,0:18:24.07:0,24,512	0/0:19,0:19:0.89:0,1,2	0/1:11,1:12:0:0,0,0	1/1:9,4:14:5.75:86,6,0	1/1:14,3:17:9.02:204,9,0	1/1:17,2:18:8.56:221,9,0	0/0:14,0:15:27.09:0,27,954	1/1:17,8:25:17.61:434,18,0	1/1:24,7:34:12.82:222,13,0	1/1:17,3:20:2.73:74,3,0	0/0:15,0:14:6:0,6,142	0/0:15,0:14:3.01:0,3,96	0/0:47,0:44:48.13:0,48,1539	1/1:16,3:19:6.02:71,6,0	./.	0/1:27,2:33:33.88:82,0,34	./.	0/0:19,0:19:0:0,0,0	0/0:13,0:13:9.03:0,9,337	0/1:8,1:8:15.95:68,0,16
chr10	31394724	.	CTGGGGG	C	15853.24	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=11.753;DP=556;FS=0.403;HRun=0;HaplotypeScore=131.1778;InbreedingCoeff=0.9748;MQ=62.77;MQ0=0;MQRankSum=-15.081;QD=40.24;ReadPosRankSum=2.813;VQSLOD=4.8918;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:17,23:40:48.16:996,48,0	1/1:0,4:4:9.03:192,9,0	0/0:19,0:17:24.08:0,24,674	0/0:15,0:16:38.15:0,38,896	1/1:3,15:18:33.11:705,33,0	1/1:4,21:25:54.19:1153,54,0	1/1:7,16:23:48.16:1025,48,0	1/1:6,5:11:15.05:307,15,0	0/0:16,0:16:42.14:0,42,1354	1/1:5,16:21:51.18:1089,51,0	1/1:4,12:16:33.11:705,33,0	1/1:4,14:18:36.12:769,36,0	1/1:5,22:27:62.43:1344,62,0	1/1:5,16:21:45.15:961,45,0	0/0:19,0:19:48.16:0,48,1550	1/1:3,18:21:36.12:769,36,0	1/1:12,16:28:39.13:833,39,0	1/1:7,8:15:21.07:449,21,0	0/0:11,0:11:18.06:0,18,541	0/0:15,0:15:36.12:0,36,1165	0/0:34,0:34:81.28:0,81,2596	1/1:3,14:17:33.11:677,33,0	1/1:5,13:18:36.12:769,36,0	1/1:6,7:13:21.07:449,21,0	1/1:4,17:21:42.14:897,42,0	1/1:5,26:31:75.26:1571,75,0	0/0:32,0:32:72.25:0,72,2317	1/1:1,5:6:9.03:192,9,0
chr10	31394736	.	GT	G	1113.36	PASS	AB=0.987;AC=23;AF=0.411;AN=56;BaseQRankSum=17.358;DP=528;FS=3.445;HRun=1;HaplotypeScore=130.9738;InbreedingCoeff=-0.1183;MQ=59.69;MQ0=0;MQRankSum=-16.207;QD=3.05;ReadPosRankSum=8.706;VQSLOD=-0.3914;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:39,0:39:48.86:49,0,207	1/1:4,0:4:7.11:24,7,0	0/0:17,0:15:41.59:0,42,535	0/0:16,0:16:33.15:0,33,451	0/1:19,0:19:37.71:53,0,38	0/1:27,0:27:83.40:83,0,101	0/1:24,0:24:53.37:79,0,53	0/0:13,0:13:3.55:0,4,254	0/0:17,0:17:51.09:0,51,653	0/1:19,1:20:46.77:87,0,47	1/1:12,0:12:26.09:89,26,0	1/1:15,0:15:6.56:72,7,0	0/1:27,0:27:15.87:110,0,16	0/1:18,2:20:16.97:81,0,17	0/0:21,0:21:63.13:0,63,788	0/1:19,0:19:10.22:66,0,10	0/1:27,0:27:61.77:62,0,124	0/1:15,0:15:29.91:30,0,103	0/0:9,0:9:26.67:0,27,328	0/0:14,0:14:42.13:0,42,563	0/0:31,0:31:93.23:0,93,1238	0/1:15,0:15:12.26:51,0,12	0/1:14,1:15:9.05:69,0,9	0/1:15,0:15:30.82:31,0,31	0/1:20,0:20:9.75:73,0,10	1/1:26,0:26:45.16:169,45,0	0/0:25,0:25:75.23:0,75,1022	0/1:6,0:6:13.79:14,0,32
chr10	31395633	.	G	GTA	3996.97	PASS	AB=0.648;AC=32;AF=0.615;AN=52;BaseQRankSum=-3.160;DP=334;FS=0.826;HRun=0;HaplotypeScore=82.2468;InbreedingCoeff=0.5033;MQ=45.53;MQ0=14;MQRankSum=1.758;QD=14.02;ReadPosRankSum=-0.109;VQSLOD=3.2347;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:29:16.49:383,16,0	1/1:4,0:3:3.01:48,3,0	./.	0/0:3,0:1:3.01:0,3,36	./.	1/1:10,0:10:15.04:233,15,0	1/1:12,0:12:20.29:220,20,0	1/1:6,28:34:53.15:668,53,0	0/0:4,0:3:9.01:0,9,90	0/1:4,10:16:2.16:192,0,2	0/1:1,10:12:0:0,0,0	0/1:13,0:13:5.77:270,0,6	1/1:14,0:13:14.98:148,15,0	1/1:14,0:14:4.15:224,4,0	0/0:3,0:3:9.01:0,9,90	1/1:9,0:9:6.63:188,7,0	1/1:14,0:13:15.05:227,15,0	1/1:20,0:16:23.56:249,24,0	0/0:4,0:4:9.43:0,9,69	0/0:6,0:6:0:0,0,0	0/0:3,0:2:2.99:0,3,24	0/0:2,5:10:2.84:0,3,14	0/1:0,13:14:0.05:0,0,0	1/1:14,0:13:11.55:117,12,0	1/1:24,0:23:22.21:330,22,0	1/1:5,16:19:0.51:255,1,0	0/0:3,0:3:2.94:0,3,18	1/1:8,0:8:2.06:244,2,0
chr10	31395882	.	GA	G	17607.26	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=5.259;DP=530;FS=15.270;HRun=1;HaplotypeScore=99.8954;InbreedingCoeff=0.9797;MQ=67.08;MQ0=0;MQRankSum=-3.043;QD=37.78;ReadPosRankSum=2.596;VQSLOD=3.4821;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,34:34:87.29:1217,87,0	1/1:0,5:5:12.04:168,12,0	0/0:16,0:15:45.15:0,45,693	0/0:19,0:19:54.18:0,54,830	1/1:0,15:15:30.06:419,30,0	1/1:0,20:20:57.19:791,57,0	1/1:0,38:38:99:1427,102,0	1/1:0,17:17:51.17:713,51,0	0/0:18,0:18:54.18:0,54,863	1/1:0,12:12:36.12:503,36,0	1/1:0,13:13:36.12:503,36,0	1/1:0,31:31:87.29:1217,87,0	1/1:0,19:19:51.17:712,51,0	1/1:0,26:26:72.14:1006,72,0	0/0:11,0:11:33.11:0,33,528	1/1:0,18:18:51.17:713,51,0	1/1:0,43:43:99:1595,114,0	1/1:1,32:33:66.15:1154,66,0	1/1:0,16:15:45.13:597,45,0	1/1:0,5:5:12.04:160,12,0	1/1:1,29:30:90.30:1254,90,0	1/1:0,10:10:30.10:419,30,0	1/1:0,10:10:24.08:335,24,0	1/1:0,13:13:36.12:504,36,0	1/1:0,18:18:48.12:649,48,0	1/1:0,10:10:30.10:420,30,0	1/1:0,23:23:63.21:880,63,0	1/1:0,7:7:18.06:252,18,0
chr10	31396844	.	GT	G	2224.23	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=5.804;DP=663;FS=1.454;HRun=6;HaplotypeScore=74.3564;InbreedingCoeff=0.9918;MQ=81.11;MQ0=0;MQRankSum=-0.337;QD=24.18;ReadPosRankSum=1.001;VQSLOD=3.6114;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,111,1376	0/0:10,0:10:30.08:0,30,380	0/0:24,0:23:21.06:0,21,256	0/0:17,1:17:13.02:0,13,173	0/0:24,0:24:63.16:0,63,785	0/0:20,0:20:57.17:0,57,734	0/0:16,0:16:45.09:0,45,545	0/0:39,0:39:99:0,99,1230	0/0:24,0:24:57.18:0,57,736	0/0:30,0:30:84.24:0,84,1029	0/0:13,0:13:36.09:0,36,445	0/0:24,0:24:63.17:0,63,799	0/0:17,0:17:45.15:0,45,592	0/0:22,0:22:57.15:0,57,706	0/0:26,0:26:60.16:0,60,748	0/0:31,0:31:90.29:0,90,1179	0/0:34,0:34:99:0,99,1189	0/0:29,0:29:78.21:0,78,994	1/1:3,20:23:60.10:619,60,0	1/1:0,17:17:44.98:445,45,0	1/1:8,25:33:69.17:741,69,0	0/0:17,0:17:51.13:0,51,624	0/0:16,0:16:42.11:0,42,523	0/0:28,0:28:78.22:0,78,1006	0/0:26,0:26:75.24:0,75,987	0/0:26,0:26:69.22:0,69,905	1/1:0,19:19:54.14:579,54,0	0/0:16,0:16:39.11:0,39,497
chr10	31399001	.	TAAGC	T	2720.08	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=11.832;DP=849;FS=0.000;HRun=0;HaplotypeScore=140.1079;InbreedingCoeff=0.9993;MQ=76.53;MQ0=1;MQRankSum=-4.057;QD=24.07;ReadPosRankSum=2.777;VQSLOD=3.5955;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,105,2527	0/0:11,0:11:33.11:0,33,824	0/0:32,0:31:45.15:0,45,1049	0/0:31,0:31:60.20:0,60,1304	0/0:28,0:28:60.68:0,61,1494	0/0:24,0:24:51.17:0,51,1206	0/0:34,0:34:39.07:0,39,1862	0/0:42,0:42:93.30:0,93,2152	0/0:44,0:44:99:0,120,2886	0/0:33,0:33:84.27:0,84,1971	0/0:20,0:20:57.20:0,57,1395	0/0:32,0:32:78.25:0,78,1859	0/0:39,0:39:99:0,99,2324	0/0:38,0:38:90.31:0,90,2205	0/0:38,0:38:84.27:0,84,2029	0/0:34,0:34:93.31:0,93,2246	0/0:27,0:27:69.24:0,69,1685	0/0:20,0:20:57.16:0,57,1331	1/1:4,8:12:24.07:373,24,0	1/1:9,22:31:51.13:834,51,0	1/1:15,24:39:35.61:656,36,0	0/0:26,0:26:57.20:0,57,1414	0/0:31,0:31:78.22:0,78,1859	0/0:41,0:41:99:0,108,2660	0/0:17,0:17:51.18:0,51,1244	0/0:35,0:35:90.30:0,90,2100	1/1:5,26:31:60.21:1018,60,0	0/0:19,0:19:48.16:0,48,1190
chr10	31399919	.	G	GA	11705.68	PASS	AB=0.955;AC=41;AF=0.732;AN=56;BaseQRankSum=0.456;DP=589;FS=8.194;HRun=8;HaplotypeScore=78.5531;InbreedingCoeff=0.9166;MQ=72.60;MQ0=0;MQRankSum=0.498;QD=26.60;ReadPosRankSum=1.905;VQSLOD=5.4041;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,25:28:66.20:762,66,0	1/1:1,13:14:36.11:415,36,0	0/1:19,1:16:4.64:5,0,212	0/0:11,0:10:7.29:0,7,97	1/1:3,27:30:78.23:897,78,0	1/1:1,18:19:48.14:554,48,0	1/1:3,16:19:45.13:519,45,0	1/1:10,25:35:74.87:828,75,0	0/0:16,0:16:42.02:0,42,384	1/1:1,19:20:54.16:623,54,0	1/1:0,21:21:63.19:727,63,0	1/1:1,18:19:51.15:589,51,0	1/1:2,7:9:18.05:208,18,0	1/1:0,12:12:30.09:346,30,0	0/0:15,0:15:42.01:0,42,379	1/1:5,17:22:42.12:485,42,0	1/1:2,27:29:72.21:831,72,0	1/1:4,18:22:42.12:485,42,0	0/0:22,0:22:53.99:0,54,484	0/0:35,0:35:90.03:0,90,824	0/0:13,0:13:33.02:0,33,302	1/1:0,12:12:36.11:415,36,0	1/1:1,20:21:54.16:623,54,0	1/1:0,10:10:30.09:346,30,0	1/1:1,15:17:32.96:361,33,0	1/1:5,25:30:78.22:890,78,0	0/0:37,0:36:99:0,102,928	1/1:0,30:30:69.20:796,69,0
chr10	31401658	.	C	CCCTT	4331.17	PASS	AB=0.972;AC=27;AF=0.540;AN=50;BaseQRankSum=5.052;DP=657;FS=2.273;HRun=0;HaplotypeScore=125.4080;InbreedingCoeff=0.0786;MQ=63.03;MQ0=6;MQRankSum=-6.138;QD=9.25;ReadPosRankSum=-4.356;VQSLOD=3.0016;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:11,10:22:14.68:227,15,0	1/1:11,3:14:12.51:258,13,0	./.	./.	1/1:11,1:12:14.86:166,15,0	0/0:16,0:16:2.26:0,2,234	0/1:35,0:35:1.36:1,0,579	./.	0/0:14,0:33:8.64:0,9,225	1/1:21,1:21:32.91:493,33,0	1/1:10,1:11:21.32:259,21,0	0/1:24,0:24:94.32:94,0,161	1/1:22,3:25:32.84:522,33,0	0/1:33,0:33:15.73:16,0,316	0/0:28,0:29:45.12:0,45,625	1/1:22,15:37:32.81:558,33,0	1/1:26,13:40:34.96:623,35,0	0/1:23,0:23:55.63:56,0,240	0/0:19,0:17:12.04:0,12,185	0/0:10,0:10:6.02:0,6,92	0/1:43,0:43:99:446,0,231	0/1:16,0:15:48.50:48,0,122	0/1:14,0:14:55.78:56,0,157	0/1:28,0:28:99:105,0,164	0/1:15,12:27:33.76:147,0,34	0/1:29,0:30:99:200,0,354	0/0:25,0:25:39.12:0,39,578	0/1:11,0:12:55.64:56,0,79
chr10	31401697	.	T	TTCCTTCCC	8407.44	PASS	AB=0.884;AC=42;AF=0.750;AN=56;BaseQRankSum=-1.844;DP=690;FS=0.540;HRun=0;HaplotypeScore=157.6692;InbreedingCoeff=0.3343;MQ=55.28;MQ0=19;MQRankSum=-1.117;QD=13.65;ReadPosRankSum=-2.757;VQSLOD=3.6303;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:31,0:30:5.64:412,0,6	1/1:9,0:8:17.65:237,18,0	0/0:4,0:3:5.98:0,6,47	0/0:10,0:3:5.68:0,6,41	1/1:12,0:12:25.24:339,25,0	1/1:25,0:25:56.90:614,57,0	1/1:21,0:37:8.68:89,9,0	1/1:23,0:17:32.98:289,33,0	0/0:31,0:30:60.01:0,60,811	1/1:25,0:23:35.86:479,36,0	1/1:12,0:12:26.87:362,27,0	1/1:9,20:30:11.96:381,12,0	1/1:31,0:31:62.41:560,62,0	1/1:11,23:37:2.83:123,3,0	0/0:29,0:29:51.04:0,51,677	1/1:31,0:30:59.06:564,59,0	1/1:38,0:38:79.05:675,79,0	0/1:13,10:23:22.53:118,0,23	0/1:19,0:14:99:127,0,113	0/1:17,0:17:34.43:242,0,34	0/1:19,0:48:16.91:301,0,17	1/1:5,13:18:17.68:212,18,0	1/1:15,0:15:29.87:283,30,0	1/1:28,0:27:59.78:726,60,0	1/1:33,0:32:44.29:401,44,0	1/1:32,0:30:50.91:578,51,0	0/1:25,0:24:99:175,0,297	1/1:4,9:13:3.01:124,3,0
chr10	31404376	.	A	ACCTT	28231.65	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-16.045;DP=800;FS=3.394;HRun=0;HaplotypeScore=104.4682;InbreedingCoeff=0.9924;MQ=71.23;MQ0=2;MQRankSum=-3.454;QD=48.59;ReadPosRankSum=1.678;VQSLOD=5.8588;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:12,35:48:84.29:2098,84,0	1/1:4,11:15:33.11:824,33,0	0/0:15,0:15:10.33:0,10,343	0/0:25,0:25:36.12:0,36,605	1/1:4,17:24:48.05:1036,48,0	1/1:7,19:26:51.18:1273,51,0	1/1:7,21:31:54.19:1348,54,0	1/1:14,13:30:48.14:1057,48,0	0/0:20,0:20:42.14:0,42,698	1/1:7,21:28:69.23:1668,69,0	1/1:6,18:28:60.12:1379,60,0	1/1:8,29:38:75.26:1870,75,0	1/1:12,12:26:39.13:967,39,0	1/1:11,20:32:48.16:1199,48,0	0/0:30,0:30:75.24:0,75,1237	1/1:2,26:30:78.27:1948,78,0	1/1:9,23:33:63.22:1573,63,0	1/1:1,19:20:54.18:1311,54,0	0/0:18,0:18:39.13:0,39,656	0/0:29,0:29:78.27:0,78,1316	0/0:43,0:43:99:0,102,1645	1/1:6,25:32:69.24:1723,69,0	1/1:2,21:26:60.21:1497,60,0	1/1:12,27:42:81.28:2023,81,0	1/1:7,16:25:45.15:1118,45,0	1/1:5,14:20:45.11:972,45,0	0/0:39,0:37:99:0,102,1673	1/1:2,22:24:54.19:1348,54,0
chr10	31404897	.	C	CATCAGTTCCAGGGTAACCAATGCCCT	4283.31	PASS	AB=0.746;AC=48;AF=0.960;AN=50;BaseQRankSum=-3.563;DP=73;FS=11.331;HRun=0;HaplotypeScore=50.1012;InbreedingCoeff=-0.1792;MQ=127.77;MQ0=0;MQRankSum=-2.901;QD=59.49;ReadPosRankSum=-0.172;VQSLOD=1.9482;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:4:6.02:218,6,0	1/1:2,0:2:6.02:141,6,0	0/1:6,1:10:19.87:773,0,20	0/1:5,0:7:64.46:185,0,64	./.	1/1:1,0:1:3.01:105,3,0	1/1:4,0:4:6.01:131,6,0	1/1:1,0:1:3.01:54,3,0	1/1:1,0:1:2.99:24,3,0	1/1:5,0:5:12.04:368,12,0	1/1:1,0:1:3.01:169,3,0	1/1:1,0:1:3.01:70,3,0	1/1:1,0:2:6:162,6,0	1/1:3,0:3:3.01:120,3,0	1/1:4,0:4:6.02:338,6,0	1/1:1,0:1:3.01:50,3,0	1/1:4,0:4:3.01:44,3,0	1/1:3,0:4:6:147,6,0	1/1:1,0:1:2.99:23,3,0	1/1:1,0:1:3.01:119,3,0	1/1:3,0:3:8.97:114,9,0	./.	1/1:1,0:2:6.02:266,6,0	./.	1/1:1,0:1:3.01:70,3,0	1/1:3,0:3:9.01:209,9,0	1/1:3,0:3:6.02:175,6,0	1/1:3,0:3:9.03:207,9,0
chr10	31405066	.	CG	C	3153.12	PASS	AC=40;AF=0.769;AN=52;BaseQRankSum=-0.444;DP=371;FS=4.784;HRun=2;HaplotypeScore=53.1504;InbreedingCoeff=0.8952;MQ=39.66;MQ0=15;MQRankSum=-1.724;QD=11.94;ReadPosRankSum=-0.305;VQSLOD=1.8648;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:23:31.35:215,31,0	1/1:6,0:6:4.25:30,4,0	./.	./.	1/1:14,1:15:23.79:177,24,0	1/1:5,2:7:16.33:88,16,0	1/1:8,1:9:22.77:144,23,0	1/1:6,1:6:15.71:102,16,0	0/0:12,0:9:11.95:0,12,108	1/1:18,0:17:43.88:314,44,0	1/1:5,0:5:7.34:55,7,0	1/1:13,0:13:30.53:215,31,0	1/1:11,0:10:29.82:227,30,0	1/1:7,0:7:9.80:62,10,0	0/0:14,0:14:26.60:0,27,250	1/1:16,0:16:33.22:226,33,0	1/1:22,0:21:36.92:259,37,0	1/1:10,0:10:9.40:90,9,0	0/0:15,0:15:32.82:0,33,266	0/0:24,0:24:38.51:0,39,364	0/0:9,0:8:5.98:0,6,47	1/1:14,0:14:20.96:152,21,0	1/1:14,0:13:30.65:262,31,0	1/1:11,0:11:17.66:122,18,0	1/1:20,0:19:18.99:186,19,0	1/1:16,0:15:29.80:173,30,0	0/0:17,0:17:32.78:0,33,248	1/1:14,0:13:29.87:234,30,0
chr10	31405090	.	ACAACAAC	A	8061.73	PASS	AB=0.781;AC=39;AF=0.696;AN=56;BaseQRankSum=1.961;DP=476;FS=7.374;HRun=0;HaplotypeScore=89.1034;InbreedingCoeff=0.5799;MQ=43.16;MQ0=21;MQRankSum=-3.862;QD=23.23;ReadPosRankSum=-2.933;VQSLOD=3.0072;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:26,1:26:51.25:786,51,0	1/1:0,8:8:11.99:220,12,0	0/0:23,0:5:15.04:0,15,350	0/0:14,0:2:3.01:0,3,66	1/1:27,4:31:67.17:1191,67,0	1/1:7,1:8:20.92:347,21,0	1/1:8,1:9:17.90:275,18,0	1/1:17,4:20:25.02:300,25,0	0/0:11,0:8:20.97:0,21,589	1/1:15,3:16:36.11:740,36,0	1/1:13,0:12:29.93:544,30,0	1/1:7,1:9:22.45:333,22,0	1/1:10,0:10:15.45:259,15,0	1/1:7,0:7:12.51:236,13,0	0/0:19,0:18:23.81:0,24,776	1/1:8,0:8:18.37:260,18,0	1/1:3,20:22:2.43:124,2,0	0/1:3,12:15:69.26:169,0,69	0/0:26,0:23:11.56:0,12,1265	0/0:34,0:35:53.58:0,54,2043	0/1:6,0:5:1.56:2,0,285	1/1:5,14:19:22.28:341,22,0	0/1:14,4:17:2.58:627,0,3	1/1:11,0:11:23.71:320,24,0	0/1:3,23:26:56.98:57,0,74	1/1:3,19:21:40.52:685,41,0	0/1:28,0:27:4.88:5,0,1472	1/1:3,1:4:12.04:238,12,0
chr10	31405098	.	AACAACAACG	A	4291.05	PASS	AB=0.979;AC=28;AF=0.500;AN=56;BaseQRankSum=9.407;DP=469;FS=4.096;HRun=0;HaplotypeScore=118.6062;InbreedingCoeff=0.1303;MQ=52.00;MQ0=17;MQRankSum=-2.857;QD=14.07;ReadPosRankSum=1.400;VQSLOD=3.3400;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:24:6.07:259,6,0	0/1:10,0:10:28.46:83,0,28	0/0:31,0:14:42.04:0,42,931	0/0:14,0:3:6.02:0,6,118	1/1:24,1:24:28.23:719,28,0	0/1:10,0:10:14.09:255,0,14	0/1:8,1:9:4.45:181,0,4	0/1:20,0:19:5.54:229,0,6	0/0:13,0:11:30.06:0,30,937	1/1:16,0:15:14.06:352,14,0	0/1:12,0:12:4.39:154,0,4	1/1:7,0:7:19.87:262,20,0	1/1:13,0:13:1.21:215,1,0	0/1:7,0:7:9.30:84,0,9	0/0:12,0:11:30.10:0,30,1020	0/1:10,0:10:19.53:134,0,20	1/1:22,0:21:6.01:80,6,0	0/1:13,1:14:65.41:141,0,65	0/0:27,0:24:60.12:0,60,1901	0/0:34,0:34:84.22:0,84,3014	0/0:7,0:6:18.06:0,18,504	1/1:16,0:16:17.57:185,18,0	0/1:20,0:19:14.72:337,0,15	0/1:10,1:10:26.19:189,0,26	0/1:27,0:26:39.73:40,0,113	1/1:21,0:20:29.92:327,30,0	0/0:25,0:24:60.20:0,60,2021	0/1:9,0:9:39.68:63,0,40
chr10	31405376	.	T	TTC	18872.59	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-9.749;DP=500;FS=20.967;HRun=0;HaplotypeScore=57.3217;InbreedingCoeff=0.9884;MQ=90.70;MQ0=1;MQRankSum=-7.843;QD=44.30;ReadPosRankSum=2.973;VQSLOD=4.1784;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,27:29:69.24:1265,69,0	1/1:0,10:10:24.08:421,24,0	0/0:26,0:26:59.95:0,60,773	0/0:18,0:18:51.17:0,51,730	1/1:2,13:15:30.10:533,30,0	1/1:0,10:10:30.10:549,30,0	1/1:4,18:23:57.19:1013,57,0	1/1:3,20:25:66.19:1139,66,0	0/0:20,0:20:60.20:0,60,859	1/1:2,13:15:36.12:657,36,0	1/1:0,7:8:15.05:274,15,0	1/1:0,15:15:42.14:768,42,0	1/1:0,19:19:48.16:878,48,0	1/1:0,18:18:48.16:879,48,0	0/0:10,0:10:30.10:0,30,429	1/1:1,13:14:39.13:718,39,0	1/1:3,23:27:48.16:880,48,0	1/1:1,22:23:57.20:1045,57,0	1/1:1,24:26:75.24:1342,75,0	1/1:1,9:10:24.08:439,24,0	1/1:1,30:32:78.27:1430,78,0	1/1:0,13:13:39.13:695,39,0	1/1:1,8:9:15.05:265,15,0	1/1:2,24:26:66.23:1209,66,0	1/1:0,9:9:21.07:384,21,0	1/1:3,16:19:39.13:714,39,0	1/1:3,15:19:42.14:769,42,0	1/1:0,11:11:33.11:604,33,0
chr10	31407399	.	CCCCA	C	2093.20	PASS	AB=0.613;AC=30;AF=0.682;AN=44;BaseQRankSum=-0.525;DP=168;FS=8.117;HRun=0;HaplotypeScore=39.7625;InbreedingCoeff=0.5459;MQ=74.21;MQ0=0;MQRankSum=-3.403;QD=15.86;ReadPosRankSum=1.199;VQSLOD=1.7984;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,5:9:11.89:167,12,0	./.	0/0:8,0:8:18.46:0,18,214	0/0:11,0:8:17.88:0,18,263	0/0:1,2:3:0.89:0,1,2	1/1:2,4:6:12:180,12,0	1/1:11,6:17:23.87:338,24,0	1/1:8,4:12:8.34:115,8,0	0/0:5,0:5:8.91:0,9,75	1/1:3,0:3:5.69:62,6,0	./.	1/1:10,1:11:19.04:269,19,0	1/1:4,0:4:7.75:57,8,0	1/1:4,0:4:5.99:57,6,0	0/0:1,0:1:3.01:0,3,76	1/1:5,8:13:11.28:182,11,0	1/1:8,2:10:25.65:269,26,0	1/1:2,10:12:8.80:165,9,0	0/1:3,5:8:30.41:150,0,30	./.	0/1:4,7:11:0:0,0,0	./.	0/0:0,2:2:0.47:0,0,1	1/1:3,0:3:6.01:80,6,0	./.	1/1:4,0:4:3.01:44,3,0	1/1:0,5:5:5.37:99,5,0	./.
chr10	31407402	.	CA	C	1156.03	PASS	AC=34;AF=0.773;AN=44;BaseQRankSum=1.049;DP=157;FS=6.055;HRun=1;HaplotypeScore=33.8105;InbreedingCoeff=0.5841;MQ=81.67;MQ0=0;MQRankSum=-3.106;QD=9.97;ReadPosRankSum=1.058;VQSLOD=1.2289;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,0:9:11.74:71,12,0	./.	0/0:9,0:9:21.29:0,21,197	0/0:13,0:9:6.80:0,7,145	1/1:3,0:3:2.94:18,3,0	1/1:6,0:6:11.74:70,12,0	1/1:14,1:15:29.46:196,29,0	1/1:7,3:10:7.97:60,8,0	0/0:4,0:4:8.76:0,9,75	1/1:5,0:5:11.66:85,12,0	./.	1/1:10,1:11:22.34:150,22,0	1/1:4,0:4:5.90:40,6,0	1/1:4,0:4:8.91:61,9,0	0/0:1,0:1:3.01:0,3,40	1/1:8,2:10:10:66,10,0	1/1:9,1:10:29.47:192,29,0	1/1:10,0:10:8.36:48,8,0	1/1:7,0:7:4.82:79,5,0	1/1:2,0:2:3:26,3,0	./.	./.	0/0:2,0:2:1.25:0,1,3	1/1:3,0:3:8.90:68,9,0	./.	1/1:2,0:2:3:29,3,0	1/1:5,0:5:4.64:35,5,0	./.
chr10	31407716	.	TGCACACACACACACACACACACACACACACAC	T	9305.90	PASS	AB=0.994;AC=25;AF=0.463;AN=54;BaseQRankSum=8.631;DP=512;FS=0.000;HRun=0;HaplotypeScore=365.6920;InbreedingCoeff=-0.3048;MQ=62.67;MQ0=10;MQRankSum=-4.510;QD=27.13;ReadPosRankSum=1.095;VQSLOD=2.4169;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:24:24.94:288,0,25	./.	0/0:47,0:29:10.26:0,10,219	0/0:41,0:16:15.01:0,15,536	0/1:14,0:14:12.96:358,0,13	0/1:18,0:18:17.92:717,0,18	0/0:26,0:25:11.84:0,12,80	0/0:20,0:20:5.93:0,6,40	0/0:15,0:15:42.14:0,42,5155	0/1:22,0:22:51.75:424,0,52	0/1:9,0:9:17.68:178,0,18	0/1:22,1:23:28.90:737,0,29	0/1:20,0:20:19.77:536,0,20	0/1:13,1:14:1.94:780,0,2	0/0:14,0:14:30.04:0,30,2943	0/1:25,0:25:7.81:1801,0,8	1/1:16,2:18:11.98:856,12,0	0/1:13,0:12:11.95:358,0,12	0/1:9,0:9:11.97:178,0,12	0/1:14,0:14:16.25:182,0,16	0/1:21,0:21:50.75:65,0,51	1/1:14,0:13:3.01:184,3,0	1/1:12,0:12:6.02:374,6,0	1/1:17,0:17:3.01:184,3,0	0/1:15,0:14:67.14:111,0,67	0/1:15,0:15:83.89:541,0,84	0/1:19,0:17:42.77:397,0,43	0/1:7,0:7:58.64:59,0,171
chr10	31407719	.	ACACACACACACACACACACACACACACACG	A	11723.78	PASS	AB=1.000;AC=43;AF=0.827;AN=52;BaseQRankSum=6.536;DP=514;FS=9.126;HRun=0;HaplotypeScore=334.3266;InbreedingCoeff=0.4726;MQ=58.71;MQ0=11;MQRankSum=-4.141;QD=31.18;ReadPosRankSum=1.155;VQSLOD=1.9974;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:20,6:26:3.32:389,3,0	./.	0/0:46,0:28:9.92:0,10,177	0/0:38,0:13:12.04:0,12,408	1/1:11,3:14:6.02:461,6,0	1/1:13,7:20:12.04:921,12,0	1/1:26,0:25:2.99:24,3,0	./.	0/0:15,0:15:42.14:0,42,4790	1/1:17,5:22:12.04:545,12,0	1/1:7,2:9:3.01:230,3,0	1/1:17,6:23:12.04:840,12,0	1/1:12,7:19:8.40:690,8,0	1/1:10,5:15:12.04:900,12,0	0/0:14,0:14:27.09:0,27,2677	1/1:15,9:24:30.10:2303,30,0	1/1:18,2:20:12.04:879,12,0	1/1:10,2:11:6.02:461,6,0	1/1:6,2:8:1.27:227,1,0	1/1:9,5:14:6.02:281,6,0	1/1:21,0:21:9.49:163,9,0	1/1:11,3:13:3.01:230,3,0	1/1:10,3:13:6.02:461,6,0	1/1:13,5:18:3.01:230,3,0	1/1:15,0:14:5.38:76,5,0	1/1:8,10:18:23.99:846,24,0	1/1:14,5:17:3.65:457,4,0	0/1:6,0:6:99:108,0,129
chr10	31409338	.	CACAA	C	23333.18	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=8.452;DP=748;FS=1.767;HRun=0;HaplotypeScore=138.1055;InbreedingCoeff=0.9798;MQ=76.46;MQ0=4;MQRankSum=-6.297;QD=37.21;ReadPosRankSum=4.997;VQSLOD=4.7577;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,41:50:96.33:1659,96,0	1/1:2,8:10:18.06:297,18,0	0/0:29,0:29:64.74:0,65,1492	0/0:27,0:27:71:0,71,1462	1/1:4,20:23:36.12:620,36,0	1/1:4,20:23:51.17:881,51,0	1/1:7,21:28:57.19:985,57,0	1/1:11,16:27:48.16:821,48,0	0/0:32,0:32:87.30:0,87,2199	1/1:9,24:32:66.22:1137,66,0	1/1:6,17:23:45.15:774,45,0	1/1:5,24:29:72.20:1210,72,0	1/1:5,26:31:75.26:1292,75,0	1/1:6,21:27:60.20:1037,60,0	0/0:33,0:33:90.31:0,90,2277	1/1:4,28:32:11.54:1376,12,0	1/1:10,30:40:78.27:1348,78,0	1/1:6,28:33:63.69:1087,64,0	1/1:3,18:21:54.13:873,54,0	1/1:0,21:21:60.21:1035,60,0	1/1:5,25:30:48.16:829,48,0	1/1:1,21:22:50.30:879,50,0	1/1:0,13:13:36.12:622,36,0	1/1:2,23:25:60.21:1037,60,0	1/1:4,21:25:60.20:1037,60,0	1/1:5,29:34:84.27:1413,84,0	1/1:2,17:19:51.17:878,51,0	1/1:1,4:5:12.04:207,12,0
chr10	31411417	.	G	GA	2681.01	PASS	AB=0.747;AC=10;AF=0.179;AN=56;BaseQRankSum=-12.212;DP=697;FS=1.789;HRun=10;HaplotypeScore=69.5450;InbreedingCoeff=0.6831;MQ=69.51;MQ0=0;MQRankSum=-1.587;QD=17.52;ReadPosRankSum=-1.845;VQSLOD=3.6261;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,1:26:30.91:0,31,461	0/0:13,0:13:32.94:0,33,269	0/0:16,0:16:3.11:0,3,148	0/0:10,0:9:14.95:0,15,121	0/0:33,3:37:1.19:0,1,606	0/0:28,1:29:42.92:0,43,559	0/0:18,0:19:49.96:0,50,396	1/1:12,12:24:24.34:439,24,0	0/0:26,0:26:71.90:0,72,590	0/0:41,0:42:97.83:0,98,787	0/0:19,0:19:47.88:0,48,385	0/0:23,1:24:24.91:0,25,411	0/0:26,0:26:62.91:0,63,516	0/0:20,0:20:47.92:0,48,394	0/0:30,0:30:68.88:0,69,561	0/0:22,0:22:65.92:0,66,541	0/0:17,0:17:41.93:0,42,345	0/0:31,2:33:16.92:0,17,552	1/1:6,16:22:48.10:499,48,0	1/1:9,28:38:38.11:801,38,0	0/1:7,17:24:44.45:387,0,44	0/0:26,0:27:55.93:0,56,449	0/0:25,0:25:59.92:0,60,492	0/0:21,0:22:52.96:0,53,424	0/0:24,0:24:71.92:0,72,591	0/0:36,0:37:94.88:0,95,769	1/1:7,27:33:25.06:710,25,0	0/1:9,1:10:11.02:11,0,127
chr10	31413036	.	TGTGTGTGTGA	T	3970.99	PASS	AB=0.781;AC=29;AF=0.537;AN=54;BaseQRankSum=2.640;DP=661;FS=29.654;HRun=0;HaplotypeScore=204.2197;InbreedingCoeff=0.3829;MQ=39.26;MQ0=40;MQRankSum=-2.038;QD=11.12;ReadPosRankSum=-1.705;VQSLOD=0.5657;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:19,7:25:17.42:237,17,0	1/1:6,7:13:9.35:256,9,0	0/0:24,0:5:5.81:0,6,80	0/0:34,0:18:23.14:0,23,242	1/1:11,6:17:5.81:116,6,0	1/1:7,4:11:3.01:49,3,0	0/1:24,6:30:42.59:263,0,43	0/0:44,0:32:76.40:0,76,1563	0/0:24,0:22:33.48:0,33,1019	0/1:31,6:32:99:806,0,624	1/1:11,5:15:2.63:50,3,0	1/1:16,5:21:4.30:97,4,0	1/1:16,10:26:13.16:381,13,0	1/1:12,1:13:3.01:36,3,0	0/0:38,0:34:48.15:0,48,1930	0/1:17,5:22:31.07:344,0,31	1/1:9,2:11:11.05:103,11,0	0/1:4,7:10:3.90:90,0,4	0/0:12,0:7:16.61:0,17,652	0/0:29,0:26:35.74:0,36,1406	0/0:55,0:48:81.73:0,82,2889	1/1:12,9:20:5.08:73,5,0	1/1:16,4:20:11.39:172,11,0	./.	0/1:18,6:21:0:0,0,0	0/1:24,5:24:99:599,0,234	0/0:18,0:18:39.56:0,40,1272	0/1:5,4:9:60.87:300,0,61
chr10	31413055	.	A	ATG	97.86	PASS	AB=0.991;AC=18;AF=0.346;AN=52;BaseQRankSum=4.885;DP=547;FS=3.711;HRun=0;HaplotypeScore=168.3076;InbreedingCoeff=0.1959;MQ=32.10;MQ0=48;MQRankSum=-4.384;QD=0.39;ReadPosRankSum=-3.230;VQSLOD=2.0251;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:13:2.68:0,3,11	0/0:11,0:11:3.04:0,3,14	./.	./.	1/1:16,0:16:2.03:6,2,0	0/0:8,0:8:0:0,0,0	0/0:25,0:25:8:0,8,77	0/1:54,0:37:43.18:43,0,591	0/0:19,3:20:14.87:0,15,188	0/1:30,0:24:37.54:38,0,181	0/1:14,0:13:0:0,0,0	1/1:17,0:17:0.10:0,0,0	0/0:21,0:21:2.32:0,2,19	0/1:10,0:10:0.13:0,0,0	0/0:33,5:34:41.49:0,41,449	0/1:12,0:12:9.10:9,0,14	1/1:10,0:10:2.96:7,3,0	0/0:10,0:9:5.99:0,6,63	0/1:12,1:7:50.15:50,0,136	0/0:23,2:25:19.69:0,20,248	0/0:45,2:35:19.94:0,20,455	0/0:18,0:17:5.10:0,5,25	0/1:19,0:18:0.33:0,0,0	1/1:23,0:22:2.60:10,3,0	0/0:24,0:21:0.47:0,0,1	0/1:26,0:21:29.15:29,0,117	0/0:12,0:12:20.86:0,21,264	1/1:8,0:8:6.37:29,6,0
chr10	31413177	.	GT	G	1833.05	PASS	AB=0.735;AC=16;AF=0.286;AN=56;BaseQRankSum=-1.408;DP=548;FS=115.911;HRun=1;HaplotypeScore=166.7288;InbreedingCoeff=-0.3929;MQ=52.50;MQ0=0;MQRankSum=-9.917;QD=5.31;ReadPosRankSum=5.596;VQSLOD=0.3599;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:36.12:0,36,569	0/1:5,9:14:99:171,0,197	0/0:14,0:12:42.12:0,42,647	0/0:11,0:8:30.09:0,30,446	0/1:12,9:21:11.39:11,0,433	0/1:7,3:10:57.58:58,0,305	0/1:15,4:19:3.64:4,0,614	0/0:23,0:23:69.22:0,69,1070	0/1:18,8:26:99:160,0,782	0/1:20,14:34:99:349,0,799	0/1:8,11:19:99:135,0,199	0/1:13,4:17:41.71:42,0,488	0/0:16,2:18:17.51:0,18,707	0/0:15,1:16:20.74:0,21,644	0/1:25,10:35:82.37:82,0,996	0/0:22,3:24:44.52:0,45,955	0/1:6,1:7:8.47:8,0,176	0/0:11,0:11:30.08:0,30,450	0/0:21,0:21:60.20:0,60,948	0/1:11,6:18:41.55:42,0,406	0/0:18,0:18:33.11:0,33,497	0/1:12,11:23:99:162,0,491	0/1:9,17:25:99:302,0,184	0/0:11,1:12:26.51:0,27,429	0/1:21,15:36:99:170,0,757	0/1:16,11:27:99:274,0,672	0/0:17,3:20:4.32:0,4,639	0/1:11,2:13:19.87:20,0,487
chr10	31413465	.	AGT	A	91.22	PASS	AB=0.941;AC=14;AF=0.259;AN=54;BaseQRankSum=3.587;DP=713;FS=14.770;HRun=0;HaplotypeScore=99.0050;InbreedingCoeff=-0.0992;MQ=65.42;MQ0=11;MQRankSum=0.012;QD=0.31;ReadPosRankSum=2.844;VQSLOD=0.4336;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:23.91:0,24,203	0/0:10,0:9:3.46:0,3,25	./.	0/0:33,0:23:0:0,0,0	0/0:16,0:15:3.01:0,3,44	0/0:19,0:19:2.88:0,3,15	0/1:40,0:40:19.38:19,0,112	0/0:36,0:36:0:0,0,0	1/1:20,0:25:2.73:14,3,0	0/0:30,0:30:5.97:0,6,46	0/1:12,0:12:18.87:19,0,35	0/0:36,0:36:21.01:0,21,259	0/1:33,0:35:1.68:2,0,77	0/1:28,6:33:43.24:43,0,138	0/0:29,0:28:12:0,12,124	0/1:16,3:19:33.93:34,0,220	0/1:18,2:20:1.89:2,0,340	0/0:27,0:26:10.90:0,11,125	1/1:21,0:21:3:32,3,0	0/0:11,0:10:2.97:0,3,20	0/0:54,0:54:13.18:0,13,293	0/1:12,1:13:23.42:23,0,40	0/1:16,0:16:14.33:14,0,61	0/1:26,0:28:13.04:13,0,335	0/1:27,0:27:7.98:8,0,118	0/0:24,0:22:8.97:0,9,74	0/0:11,0:11:3.90:0,4,45	0/0:23,0:23:5.99:0,6,58
chr10	31414121	.	A	ATG	2773.84	PASS	AB=0.862;AC=33;AF=0.635;AN=52;BaseQRankSum=-4.259;DP=692;FS=7.384;HRun=0;HaplotypeScore=111.4064;InbreedingCoeff=0.0536;MQ=51.86;MQ0=29;MQRankSum=2.732;QD=5.32;ReadPosRankSum=2.197;VQSLOD=2.2302;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:42,0:41:18.31:126,0,18	1/1:9,2:11:17.04:179,17,0	./.	./.	1/1:10,10:19:6:89,6,0	0/1:17,9:26:1.01:81,0,1	0/1:37,2:38:8.67:190,0,9	1/1:24,0:18:0.47:1,0,0	0/1:25,0:25:0:0,0,0	0/1:19,1:20:5.06:183,0,5	1/1:7,1:7:3.01:45,3,0	1/1:12,9:21:3.01:45,3,0	1/1:16,5:20:27.07:362,27,0	0/1:19,3:22:11.49:220,0,11	0/0:19,0:17:2.04:0,2,11	1/1:20,6:25:3.01:45,3,0	0/1:13,9:23:20.12:190,0,20	0/1:29,4:33:3.01:286,0,3	1/1:19,0:16:0.47:1,0,0	0/0:4,0:10:4.98:0,5,28	0/0:60,0:57:4.34:0,4,13	0/1:16,6:20:0:0,0,0	0/1:13,7:19:23.40:80,0,23	1/1:31,3:34:12.96:179,13,0	0/1:20,5:25:9.81:239,0,10	1/1:25,3:27:15.91:194,16,0	0/0:10,0:12:2.78:0,3,26	1/1:10,1:11:17.42:175,17,0
chr10	31414249	.	TGTGTGTGTGTGTGC	T	3184.38	PASS	AB=0.990;AC=26;AF=0.464;AN=56;BaseQRankSum=3.195;DP=697;FS=1.936;HRun=0;HaplotypeScore=214.4533;InbreedingCoeff=-0.5518;MQ=53.15;MQ0=24;MQRankSum=-2.788;QD=5.29;ReadPosRankSum=0.372;VQSLOD=2.8648;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:45,0:42:99:256,0,345	0/1:9,0:9:51.14:51,0,81	0/0:14,0:3:2.73:0,3,15	0/0:16,0:7:3.97:0,4,76	0/1:18,0:18:90.95:91,0,113	0/1:21,0:21:83.17:86,0,83	0/1:31,1:31:81.16:149,0,81	0/1:14,0:10:70.50:71,0,274	0/0:26,0:25:53.93:0,54,2166	0/1:22,0:21:99:209,0,328	0/1:17,0:16:99:174,0,130	0/1:28,1:28:20.74:371,0,21	1/1:28,0:28:18.15:175,18,0	0/1:34,0:34:96.53:147,0,97	0/0:27,0:27:60.11:0,60,2508	0/1:29,1:30:52.72:266,0,53	0/1:25,1:26:99:232,0,197	0/1:28,1:29:99:156,0,141	0/1:14,0:12:32.59:33,0,227	0/0:12,0:12:3.48:0,3,50	0/1:60,0:56:99:231,0,543	0/1:23,0:23:78.56:79,0,407	1/1:16,0:15:2.39:59,2,0	0/1:65,0:65:55.85:56,0,74	0/1:22,1:23:99:165,0,148	0/1:22,0:22:99:239,0,117	0/1:21,0:21:28.18:28,0,170	1/1:4,0:4:2.96:19,3,0
chr10	31414251	.	TGTGTGTGTGTGC	T	5634.92	PASS	AB=0.993;AC=29;AF=0.518;AN=56;BaseQRankSum=3.898;DP=700;FS=8.556;HRun=0;HaplotypeScore=192.0110;InbreedingCoeff=-0.3142;MQ=53.66;MQ0=21;MQRankSum=-1.162;QD=9.30;ReadPosRankSum=0.308;VQSLOD=2.6539;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:42,0:39:74.93:516,0,75	1/1:9,0:9:4.59:185,5,0	0/0:14,0:3:2.45:0,2,15	0/0:14,0:6:3.97:0,4,57	0/1:18,0:18:14.38:145,0,14	0/1:19,2:21:27.85:161,0,28	0/1:34,0:33:43.79:141,0,44	0/1:14,0:10:76.53:77,0,145	0/0:28,0:27:59.68:0,60,1847	0/1:23,0:22:99:434,0,103	0/1:16,0:15:9.36:244,0,9	1/1:29,2:30:27.15:645,27,0	1/1:28,0:28:26.74:387,27,0	0/1:34,0:34:65.18:326,0,65	0/0:27,0:27:60.09:0,60,2090	0/1:28,1:29:0.66:392,0,1	0/1:27,0:27:99:303,0,102	0/1:28,0:28:62.16:175,0,62	0/1:14,0:12:97.48:97,0,101	0/0:11,0:11:3.47:0,3,25	0/1:57,0:55:99:369,0,340	0/1:23,0:23:99:193,0,113	1/1:17,0:16:1.93:26,2,0	0/1:67,0:67:13.25:65,0,13	0/1:24,0:24:70.84:190,0,71	1/1:25,0:25:12.83:377,13,0	0/1:21,0:21:61.45:143,0,61	1/1:4,0:4:3.01:45,3,0
chr10	31414253	.	TGTGTGTGTGC	T	8427.95	PASS	AB=0.810;AC=36;AF=0.643;AN=56;BaseQRankSum=2.720;DP=683;FS=9.795;HRun=0;HaplotypeScore=165.3409;InbreedingCoeff=-0.0662;MQ=55.45;MQ0=21;MQRankSum=-2.183;QD=13.77;ReadPosRankSum=0.393;VQSLOD=3.4378;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:35,4:36:0.52:736,1,0	1/1:7,2:9:20.84:234,21,0	0/0:16,0:5:8.43:0,8,59	0/1:15,0:7:0.08:0,0,31	0/1:13,3:16:9.07:145,0,9	0/1:4,16:20:20.95:173,0,21	0/1:6,28:33:45.40:173,0,45	0/1:11,0:7:62.33:83,0,62	0/0:28,0:27:56.68:0,57,1465	1/1:22,2:23:29.51:630,30,0	1/1:11,2:12:9.94:299,10,0	1/1:4,27:30:42.01:1173,42,0	1/1:5,24:29:26.82:742,27,0	0/1:9,22:32:38.35:519,0,38	0/0:27,0:27:57.01:0,57,1619	1/1:5,24:29:21.54:595,22,0	0/1:25,2:27:36.19:355,0,36	0/1:7,20:27:44.07:191,0,44	0/1:13,0:12:8.95:147,0,9	0/1:11,0:11:0:0,0,0	0/1:53,0:52:84.81:465,0,85	0/1:18,4:22:6.80:368,0,7	1/1:2,15:16:1.87:11,2,0	1/1:7,61:68:2.58:99,3,0	0/1:3,19:22:25.71:267,0,26	1/1:2,22:24:53.19:593,53,0	0/1:20,2:22:13:340,0,13	1/1:0,4:4:3.01:90,3,0
chr10	31414255	.	TGTGTGTGC	T	7450.17	PASS	AB=1.000;AC=41;AF=0.732;AN=56;BaseQRankSum=2.537;DP=658;FS=3.321;HRun=0;HaplotypeScore=148.6298;InbreedingCoeff=0.3026;MQ=55.91;MQ0=21;MQRankSum=-1.590;QD=13.23;ReadPosRankSum=0.558;VQSLOD=4.0096;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:35,0:32:22.48:653,22,0	1/1:8,0:8:20.84:201,21,0	0/0:17,0:6:11.72:0,12,94	0/0:15,0:7:0.25:0,0,32	1/1:16,0:16:10.12:177,10,0	0/1:20,0:20:7.13:126,0,7	0/1:32,0:31:44.81:125,0,45	0/1:12,0:8:22.58:127,0,23	0/0:27,0:26:56.64:0,57,1197	1/1:23,0:22:61.49:655,61,0	1/1:14,0:13:0.25:278,0,0	1/1:31,0:30:41.94:788,42,0	1/1:29,0:29:26.77:477,27,0	1/1:29,1:30:5.94:364,6,0	0/0:26,0:26:57:0,57,1421	1/1:28,0:28:21.53:403,22,0	0/1:20,0:20:12.27:259,0,12	0/1:26,0:26:19.81:141,0,20	1/1:3,11:13:8.52:308,9,0	0/0:1,9:10:0:0,0,0	1/1:54,1:54:68.51:693,69,0	1/1:19,0:19:12.36:285,12,0	1/1:16,0:16:2.10:24,2,0	1/1:65,0:65:2.60:66,3,0	1/1:22,0:22:12.03:226,12,0	1/1:24,0:24:52.83:499,53,0	1/1:2,18:20:18.68:516,19,0	1/1:4,0:4:3.01:57,3,0
chr10	31414266	.	GCA	G	265.15	PASS	AB=0.989;AC=27;AF=0.500;AN=54;BaseQRankSum=9.631;DP=626;FS=9.101;HRun=0;HaplotypeScore=136.1907;InbreedingCoeff=0.0460;MQ=62.95;MQ0=10;MQRankSum=-7.063;QD=0.57;ReadPosRankSum=5.736;VQSLOD=1.7315;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:32:6.61:7,0,17	1/1:8,0:8:3.32:11,3,0	0/0:19,0:10:23.54:0,24,277	0/0:19,0:12:23.11:0,23,193	0/0:17,0:17:6.44:0,6,50	0/1:19,0:19:11.22:11,0,16	1/1:26,0:26:4.41:14,4,0	0/0:14,0:13:5.95:0,6,73	0/0:29,0:28:66.21:0,66,1031	1/1:23,0:23:0.99:21,1,0	1/1:13,0:13:6.02:27,6,0	0/1:32,0:32:16.35:70,0,16	0/1:28,1:29:30.79:45,0,31	0/1:27,2:29:11.64:33,0,12	0/0:20,0:20:48.16:0,48,819	1/1:26,0:26:12.03:47,12,0	0/1:22,0:22:12.73:13,0,47	1/1:21,0:21:6.90:23,7,0	0/1:11,0:11:3.68:6,0,4	./.	0/1:49,1:50:10.43:10,0,56	0/0:19,0:19:0.87:0,1,41	0/0:17,0:17:2.57:0,3,25	0/1:60,0:60:5.32:5,0,38	0/1:19,0:19:13.14:13,0,15	1/1:22,0:22:4.77:13,5,0	0/1:16,0:16:7.70:36,0,8	1/1:4,0:4:2.97:20,3,0
chr10	31418995	.	TTTAG	T	5588.42	PASS	AB=0.662;AC=42;AF=0.808;AN=52;BaseQRankSum=3.747;DP=679;FS=0.675;HRun=0;HaplotypeScore=117.7761;InbreedingCoeff=0.7197;MQ=69.53;MQ0=2;MQRankSum=-2.037;QD=10.45;ReadPosRankSum=1.036;VQSLOD=4.0069;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,0:23:9.01:84,9,0	1/1:4,0:11:18.02:168,18,0	./.	./.	1/1:9,0:26:11.05:110,11,0	1/1:10,0:21:15.02:140,15,0	1/1:21,0:33:12.01:112,12,0	1/1:40,0:40:2.98:21,3,0	0/0:10,0:20:15.05:0,15,253	0/0:29,0:30:45.15:0,45,1019	0/0:19,0:19:21.06:0,21,445	1/1:13,23:35:48.16:739,48,0	1/1:17,12:29:30.10:462,30,0	1/1:12,17:30:30.10:444,30,0	0/0:12,0:26:33.08:0,33,520	0/1:11,0:26:16.14:271,0,16	0/1:11,0:20:0:0,0,0	1/1:13,13:26:24.08:370,24,0	1/1:14,2:15:5.98:66,6,0	1/1:7,12:19:32.93:402,33,0	1/1:9,11:20:21.07:324,21,0	1/1:15,8:23:15.05:231,15,0	1/1:16,5:21:9.03:139,9,0	1/1:9,14:23:27.09:416,27,0	1/1:9,0:23:15.02:140,15,0	1/1:11,0:22:17.82:147,18,0	1/1:15,19:33:45.15:693,45,0	1/1:6,0:13:12.01:112,12,0
chr10	31420598	.	ATT	A	11988.91	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-9.423;DP=695;FS=6.468;HRun=11;HaplotypeScore=101.1950;InbreedingCoeff=0.9627;MQ=66.57;MQ0=6;MQRankSum=-1.831;QD=24.62;ReadPosRankSum=5.679;VQSLOD=4.4705;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,20:26:45.08:479,45,0	1/1:3,12:15:27.05:287,27,0	0/0:21,1:15:1.30:0,1,256	0/0:14,1:13:31.30:0,31,380	1/1:6,22:28:57.06:597,57,0	1/1:3,22:25:51.13:543,51,0	1/1:1,15:16:42.10:447,42,0	0/0:9,0:32:62.68:0,63,283	0/0:22,0:22:60.18:0,60,883	1/1:6,37:43:99:1180,111,0	1/1:1,18:19:51.12:542,51,0	1/1:0,26:26:69.17:733,69,0	1/1:1,27:28:69.17:734,69,0	1/1:2,22:24:57.14:607,57,0	0/0:19,0:19:57.18:0,57,824	1/1:3,23:26:66.15:702,66,0	1/1:3,18:23:39:526,39,0	1/1:4,15:20:36.01:438,36,0	0/0:4,1:23:16.75:0,17,130	0/0:3,0:27:59.34:0,59,203	0/0:3,0:18:35.96:0,36,195	1/1:3,28:31:78.17:826,78,0	1/1:4,21:25:57.12:606,57,0	1/1:4,15:19:42.09:447,42,0	1/1:0,32:32:78.20:830,78,0	1/1:2,29:31:87.20:922,87,0	0/0:3,0:29:60.26:0,60,219	1/1:8,21:26:51.08:543,51,0
chr10	31421787	.	G	GTA	2176.53	PASS	AB=0.841;AC=36;AF=0.818;AN=44;BaseQRankSum=-2.262;DP=199;FS=2.802;HRun=0;HaplotypeScore=24.3210;InbreedingCoeff=0.3096;MQ=62.09;MQ0=25;MQRankSum=-1.505;QD=12.44;ReadPosRankSum=-2.554;VQSLOD=2.5845;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,3:11:9.01:107,9,0	1/1:0,3:3:6.02:100,6,0	0/0:4,0:3:2.96:0,3,19	0/1:9,0:5:17.53:18,0,24	1/1:1,6:4:3.01:50,3,0	1/1:10,11:15:15.05:246,15,0	./.	1/1:4,17:9:12.03:145,12,0	0/0:5,0:5:15.05:0,15,189	1/1:2,3:4:6.02:96,6,0	./.	1/1:2,3:4:3.01:50,3,0	./.	1/1:2,1:2:3:25,3,0	0/0:6,0:6:12.04:0,12,151	1/1:1,1:2:3.01:50,3,0	1/1:3,11:10:21.07:349,21,0	1/1:1,9:6:6.02:100,6,0	1/1:8,7:11:18.06:287,18,0	1/1:3,0:2:3.01:47,3,0	./.	./.	1/1:2,0:2:6:63,6,0	./.	0/1:8,7:12:16.78:256,0,17	1/1:2,6:1:3.01:47,3,0	1/1:5,5:6:9.03:125,9,0	1/1:4,4:7:9.03:149,9,0
chr10	31421788	.	T	TAC	1052.96	PASS	AB=0.943;AC=25;AF=0.481;AN=52;BaseQRankSum=5.544;DP=201;FS=19.905;HRun=0;HaplotypeScore=28.0912;InbreedingCoeff=-0.2364;MQ=64.53;MQ0=25;MQRankSum=-1.714;QD=6.05;ReadPosRankSum=4.240;VQSLOD=0.8507;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:10,3:11:59.78:60,0,77	1/1:3,0:3:6:57,6,0	0/0:5,0:4:3.01:0,3,38	0/1:8,0:5:24.16:24,0,49	1/1:7,0:4:3:26,3,0	0/1:21,0:15:50.86:108,0,51	1/1:2,0:2:2.94:18,3,0	0/1:22,0:10:35.37:35,0,56	0/0:5,0:5:15.05:0,15,229	0/1:5,0:4:18.96:34,0,19	0/0:1,0:1:3:0,3,25	0/1:5,0:4:15.89:16,0,41	./.	0/0:3,0:2:2.51:0,3,23	0/0:7,0:7:18.03:0,18,233	0/1:2,0:2:18.89:19,0,19	0/1:14,0:10:21.91:166,0,22	1/1:10,0:5:6.01:58,6,0	0/1:13,1:10:31.02:131,0,31	0/1:3,0:2:15.94:16,0,19	./.	0/0:1,0:1:3:0,3,25	1/1:2,0:2:5.67:29,6,0	0/0:3,0:3:5.99:0,6,48	0/1:13,3:13:90.71:197,0,91	1/1:7,1:1:2.98:22,3,0	0/1:7,3:6:12.08:128,0,12	0/1:8,0:7:62.51:63,0,76
chr10	31423650	.	AT	A	14572.50	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=7.957;DP=685;FS=0.470;HRun=9;HaplotypeScore=91.6274;InbreedingCoeff=0.9964;MQ=72.03;MQ0=0;MQRankSum=-4.104;QD=24.09;ReadPosRankSum=1.769;VQSLOD=5.1858;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,58:61:99:1455,159,0	1/1:2,8:10:21.01:192,21,0	0/0:8,0:8:18.05:0,18,204	0/0:19,0:19:36.09:0,36,405	1/1:1,34:35:96.01:871,96,0	1/1:3,23:26:66.03:604,66,0	1/1:3,28:31:75.02:686,75,0	1/1:4,21:25:63.01:567,63,0	0/0:25,0:25:69.18:0,69,777	1/1:1,26:27:74.83:671,75,0	1/1:0,22:22:63.03:577,63,0	1/1:1,21:22:63.03:577,63,0	1/1:3,16:19:48.02:439,48,0	1/1:1,24:25:66.03:604,66,0	0/0:28,0:28:81.21:0,81,909	1/1:4,22:27:68.07:610,68,0	1/1:1,14:15:42.02:384,42,0	1/1:3,23:26:69.03:632,69,0	1/1:2,21:23:63.03:577,63,0	1/1:1,25:26:72:651,72,0	1/1:1,14:15:36.02:330,36,0	1/1:2,23:25:63.01:577,63,0	1/1:3,25:28:72.03:659,72,0	1/1:3,20:23:60.03:549,60,0	1/1:3,22:25:66.03:604,66,0	1/1:2,24:26:72.04:659,72,0	1/1:3,28:31:87.04:795,87,0	1/1:1,11:12:33.02:302,33,0
chr10	31426007	.	CA	C	17621.52	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=3.227;DP=831;FS=14.228;HRun=2;HaplotypeScore=207.5480;InbreedingCoeff=0.9386;MQ=58.68;MQ0=27;MQRankSum=3.428;QD=29.92;ReadPosRankSum=6.125;VQSLOD=2.0259;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,35:38:87.24:1054,87,0	1/1:1,12:12:26.27:349,26,0	0/0:90,0:30:80.27:0,80,916	0/0:81,1:32:48.26:0,48,691	1/1:3,19:22:60.14:723,60,0	1/1:3,18:19:44.17:547,44,0	1/1:4,19:22:52.85:636,53,0	1/1:4,26:27:75.22:952,75,0	0/0:29,0:29:87.22:0,87,1193	1/1:1,31:32:93.16:1119,93,0	1/1:1,18:19:54.17:696,54,0	1/1:1,29:30:78.20:935,78,0	1/1:1,27:27:66.21:833,66,0	1/1:2,23:25:63.15:744,63,0	0/0:40,0:40:99:0,120,1722	1/1:2,23:25:54.29:750,54,0	1/1:2,28:29:69.13:872,69,0	1/1:2,11:12:24.08:311,24,0	1/1:9,7:15:1.71:274,2,0	1/1:2,16:18:48.14:599,48,0	1/1:9,40:49:99:1324,105,0	1/1:0,24:24:72.23:911,72,0	1/1:1,11:12:30.05:355,30,0	1/1:7,31:37:82.80:1021,83,0	1/1:1,17:18:15.25:582,15,0	1/1:5,20:25:63.17:775,63,0	1/1:2,26:27:72.21:891,72,0	1/1:0,11:10:30.09:369,30,0
chr10	31426008	.	A	AC	1634.23	PASS	AB=1.000;AC=45;AF=0.804;AN=56;BaseQRankSum=10.415;DP=831;FS=1.070;HRun=1;HaplotypeScore=267.0215;InbreedingCoeff=0.5800;MQ=57.92;MQ0=26;MQRankSum=3.179;QD=2.77;ReadPosRankSum=6.048;VQSLOD=-0.5082;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:40,0:40:13.85:90,14,0	1/1:14,0:13:3.81:12,4,0	0/0:90,0:29:75.24:0,75,869	0/0:81,0:31:59.57:0,60,752	1/1:21,0:21:6.64:29,7,0	1/1:20,1:19:12.05:74,12,0	1/1:22,0:21:17.56:69,18,0	1/1:27,2:26:26.65:115,27,0	0/0:29,0:29:87.22:0,87,1165	1/1:33,0:33:32.36:176,32,0	1/1:19,0:19:11.79:62,12,0	1/1:29,0:29:26.23:125,26,0	1/1:29,0:28:16.46:53,16,0	1/1:24,1:25:23.12:94,23,0	0/0:40,0:40:99:0,120,1644	0/1:25,0:25:9.04:16,0,9	1/1:30,0:29:19.89:108,20,0	1/1:11,1:11:4.18:12,4,0	0/1:14,0:13:33.28:41,0,33	1/1:19,0:19:14.16:43,14,0	1/1:47,1:48:21.95:104,22,0	1/1:25,0:25:19.80:79,20,0	1/1:13,0:13:11.78:46,12,0	1/1:35,0:35:13.77:44,14,0	0/1:19,0:19:24.25:40,0,24	1/1:24,1:25:24.13:169,24,0	1/1:28,0:26:22.44:111,22,0	1/1:14,0:13:13.20:96,13,0
chr10	31426017	.	AACC	A	8718.94	PASS	AB=1.000;AC=49;AF=0.875;AN=56;BaseQRankSum=2.363;DP=851;FS=0.000;HRun=0;HaplotypeScore=270.5002;InbreedingCoeff=0.7820;MQ=55.98;MQ0=30;MQRankSum=1.391;QD=13.60;ReadPosRankSum=0.447;VQSLOD=3.9629;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:44,1:44:99:603,108,0	1/1:16,0:15:43.34:261,43,0	0/0:88,0:24:10.20:0,10,323	0/0:80,1:27:8.04:0,8,285	1/1:24,1:25:37.28:300,37,0	1/1:21,3:22:52.29:290,52,0	1/1:17,2:18:41.70:242,42,0	1/1:23,0:20:50.96:298,51,0	0/1:30,0:30:80.86:81,0,513	1/1:32,1:33:93.88:603,94,0	1/1:16,1:17:49.11:272,49,0	1/1:28,0:28:70.32:390,70,0	1/1:27,0:26:64.02:325,64,0	1/1:24,2:26:73.37:415,73,0	0/0:38,0:38:12.48:0,12,874	1/1:22,2:24:62.53:371,63,0	1/1:28,1:28:61.93:345,62,0	1/1:12,0:12:25.71:141,26,0	1/1:14,2:15:21.97:210,22,0	1/1:20,2:22:59.01:340,59,0	1/1:47,4:51:99:667,121,0	1/1:24,0:24:51.80:300,52,0	1/1:14,1:15:21.62:227,22,0	1/1:38,0:37:82.49:426,82,0	1/1:24,0:24:63.10:375,63,0	1/1:24,4:28:81.17:591,81,0	1/1:27,2:27:69.70:398,70,0	1/1:16,0:15:37.16:248,37,0
chr10	31427783	.	GGA	G	1661.71	PASS	AB=0.792;AC=34;AF=0.680;AN=50;BaseQRankSum=-0.871;DP=203;FS=36.805;HRun=0;HaplotypeScore=37.8751;InbreedingCoeff=0.5850;MQ=102.54;MQ0=4;MQRankSum=-2.762;QD=17.49;ReadPosRankSum=4.235;VQSLOD=1.8322;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,8:10:12.03:147,12,0	1/1:0,3:3:3.01:43,3,0	0/0:32,0:18:26.26:0,26,503	0/0:35,0:24:50.81:0,51,578	1/1:2,3:5:6.02:86,6,0	1/1:0,2:2:3.01:43,3,0	1/1:1,14:15:27.09:386,27,0	0/0:7,0:6:15.04:0,15,241	./.	1/1:1,2:3:6.02:86,6,0	1/1:1,3:4:9.03:129,9,0	1/1:1,7:8:8.84:105,9,0	1/1:4,0:4:11.24:118,11,0	1/1:1,2:3:3.01:43,3,0	0/1:7,0:7:10.75:11,0,197	1/1:1,3:4:6.02:86,6,0	0/1:2,5:7:1.66:117,0,2	1/1:1,2:3:3.01:43,3,0	0/0:7,0:7:18.04:0,18,255	0/0:6,0:6:8.80:0,9,73	0/0:10,0:10:27.08:0,27,451	1/1:0,3:3:3.01:43,3,0	1/1:4,0:4:9.02:111,9,0	1/1:1,2:3:3.01:43,3,0	./.	1/1:2,5:7:15.04:196,15,0	0/0:5,0:5:12.04:0,12,203	./.
chr10	31427894	.	C	CAT	606.10	PASS	AB=1.000;AC=17;AF=0.386;AN=44;BaseQRankSum=3.565;DP=143;FS=0.000;HRun=0;HaplotypeScore=52.6810;InbreedingCoeff=0.4461;MQ=57.04;MQ0=2;MQRankSum=-5.003;QD=7.77;ReadPosRankSum=1.084;VQSLOD=2.8322;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:18:35.93:0,36,396	0/0:3,0:3:3.01:0,3,37	0/0:2,0:1:3.01:0,3,33	0/1:7,0:2:0.03:0,0,0	./.	0/0:6,0:7:14.88:0,15,160	0/0:3,0:3:3.01:0,3,37	1/1:40,0:40:22.13:311,22,0	1/1:3,0:3:5.97:45,6,0	./.	0/0:2,0:2:3.01:0,3,37	1/1:3,0:4:8.80:58,9,0	0/0:5,0:5:6.02:0,6,73	1/1:0,0:3:9:79,9,0	0/0:2,0:2:3.01:0,3,37	0/0:3,0:3:6.02:0,6,73	0/0:7,0:7:18.06:0,18,220	1/1:1,3:3:6.02:97,6,0	0/1:8,0:8:7.60:67,0,8	./.	./.	0/0:1,0:1:3.01:0,3,37	./.	1/1:2,1:3:3.01:49,3,0	0/0:4,0:4:12.04:0,12,147	0/1:3,0:3:11.38:19,0,11	1/1:3,0:3:3:25,3,0	./.
chr10	31428065	.	G	GAT	411.62	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=1.871;DP=390;FS=12.206;HRun=0;HaplotypeScore=60.4621;InbreedingCoeff=0.7578;MQ=91.54;MQ0=0;MQRankSum=-0.822;QD=41.16;ReadPosRankSum=-1.239;VQSLOD=4.2646;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:81.19:0,81,1140	0/0:3,0:3:9.03:0,9,132	0/0:18,0:19:45.09:0,45,728	0/0:22,0:22:63.17:0,63,882	0/0:7,0:7:20.99:0,21,261	0/0:12,0:12:33.11:0,33,486	0/0:10,0:10:30.10:0,30,442	0/0:29,0:29:81.27:0,81,1192	0/0:14,0:14:42.14:0,42,618	0/0:6,0:6:18.06:0,18,263	0/0:4,0:4:12.03:0,12,158	0/0:17,0:17:48.08:0,48,659	0/0:15,0:15:36.99:0,37,570	0/0:17,0:17:45.29:0,45,677	0/0:21,0:21:56.59:0,57,877	0/0:19,0:19:47.53:0,48,721	0/0:10,0:10:30.10:0,30,442	1/1:1,9:10:27.09:505,27,0	0/0:30,0:30:84.25:0,84,1213	0/0:4,0:4:9.03:0,9,132	0/0:29,0:29:87.21:0,87,1232	0/0:4,0:4:12.04:0,12,177	0/0:6,0:6:18.03:0,18,235	0/0:19,0:19:54.15:0,54,771	0/0:6,0:6:18.06:0,18,265	0/0:12,0:12:36.12:0,36,530	0/0:12,0:12:36.12:0,36,530	0/0:2,0:2:6.02:0,6,88
chr10	31428129	.	GGGAGAGGGGAGAAAGT	G	36.37	PASS	AB=0.905;AC=5;AF=0.114;AN=44;BaseQRankSum=3.924;DP=98;FS=22.635;HRun=0;HaplotypeScore=61.8619;InbreedingCoeff=0.0241;MQ=109.27;MQ0=0;MQRankSum=3.480;QD=1.30;ReadPosRankSum=-1.340;VQSLOD=0.0021;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:3,0:3:6.91:0,7,406	./.	0/1:6,4:9:39.56:40,0,317	0/1:10,0:10:73.60:74,0,326	./.	0/0:4,0:4:12.04:0,12,565	0/0:5,0:5:15.05:0,15,1014	0/0:12,0:12:33.11:0,33,1417	0/0:4,0:4:12.04:0,12,707	0/0:3,0:3:8.98:0,9,447	1/1:3,0:3:2.94:18,3,0	0/1:5,0:5:2.94:3,0,711	0/0:2,0:2:6.02:0,6,364	0/0:4,0:4:12.04:0,12,818	0/0:2,0:2:6.02:0,6,356	0/0:4,0:4:9.03:0,9,616	0/0:3,0:3:6.02:0,6,420	0/0:1,0:1:3.01:0,3,169	0/0:3,0:3:3.01:0,3,134	0/0:1,0:1:3.01:0,3,189	0/0:2,0:2:6.02:0,6,126	./.	0/0:4,0:4:6.02:0,6,218	./.	./.	0/0:3,0:3:6.02:0,6,438	0/0:6,0:6:12.04:0,12,570	./.
chr10	31428465	.	T	TGG	651.43	PASS	AC=10;AF=0.556;AN=18;BaseQRankSum=1.560;DP=134;FS=0.000;HRun=7;HaplotypeScore=72.2676;MQ=83.72;MQ0=6;MQRankSum=-2.779;QD=13.03;ReadPosRankSum=-1.174;VQSLOD=-0.0007;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:23,0:10:13.58:0,14,168	0/0:35,0:21:26.75:0,27,317	./.	./.	./.	1/1:14,2:13:15.41:128,15,0	0/0:13,0:13:21.05:0,21,244	./.	./.	./.	./.	./.	0/0:11,0:11:23.52:0,24,233	./.	./.	./.	1/1:7,0:6:11.79:88,12,0	1/1:1,3:4:9.03:148,9,0	1/1:9,3:12:11.60:113,12,0	./.	./.	./.	./.	./.	1/1:9,2:11:23.27:288,23,0	./.
chr10	31428480	.	G	GA	1413.74	PASS	AB=1.000;AC=11;AF=0.550;AN=20;BaseQRankSum=-0.952;DP=163;FS=0.806;HRun=9;HaplotypeScore=70.5608;InbreedingCoeff=0.9067;MQ=86.48;MQ0=5;MQRankSum=-2.904;QD=18.85;ReadPosRankSum=-2.113;VQSLOD=3.1646;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:28,0:12:17.37:0,17,171	0/0:37,0:22:36.06:0,36,269	./.	./.	./.	1/1:7,13:18:10.08:339,10,0	0/0:11,0:11:29.99:0,30,260	./.	./.	./.	./.	./.	0/0:11,0:11:32.88:0,33,273	0/1:1,0:1:0:0,0,0	./.	./.	1/1:6,9:14:36.92:384,37,0	1/1:4,4:8:18.05:197,18,0	1/1:4,10:14:24.06:264,24,0	./.	./.	./.	./.	./.	1/1:8,9:17:33.05:345,33,0	./.
chr10	31428499	.	AGG	A	306.55	PASS	AC=10;AF=0.357;AN=28;BaseQRankSum=5.399;DP=149;FS=2.485;HRun=4;HaplotypeScore=62.3764;InbreedingCoeff=0.8120;MQ=84.77;MQ0=5;MQRankSum=-1.836;QD=27.87;ReadPosRankSum=-0.472;VQSLOD=2.1672;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:16,0:8:15.05:0,15,260	0/0:25,0:16:11.98:0,12,330	./.	./.	./.	0/0:21,0:19:48.12:0,48,861	0/0:11,0:11:27.09:0,27,506	./.	1/1:0,1:1:3.01:43,3,0	1/1:0,2:2:6.02:85,6,0	./.	./.	0/0:15,0:15:45.15:0,45,817	./.	1/1:0,2:2:6.02:86,6,0	./.	0/0:18,0:16:42.14:0,42,764	0/0:9,0:9:21.07:0,21,383	0/0:12,0:11:24.08:0,24,448	./.	./.	1/1:0,3:3:6.02:86,6,0	./.	1/1:0,3:3:9.03:129,9,0	0/0:9,0:9:24.04:0,24,402	./.
chr10	31428573	.	C	CAAAA	8015.18	PASS	AB=1.000;AC=49;AF=0.875;AN=56;BaseQRankSum=1.541;DP=366;FS=0.000;HRun=12;HaplotypeScore=100.1764;InbreedingCoeff=0.6884;MQ=52.18;MQ0=17;MQRankSum=-4.771;QD=25.86;ReadPosRankSum=-3.097;VQSLOD=3.0690;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,6:17:20.84:313,21,0	1/1:1,0:1:3.01:67,3,0	0/1:30,0:8:2.90:3,0,138	0/0:24,0:8:10.89:0,11,114	1/1:7,5:13:27.06:501,27,0	1/1:3,8:13:15.05:284,15,0	1/1:9,8:18:36.08:652,36,0	1/1:17,1:16:39.43:553,39,0	0/0:17,0:17:14.57:0,15,196	1/1:9,0:9:21.05:312,21,0	1/1:7,1:10:21:263,21,0	1/1:8,3:15:30.02:478,30,0	1/1:5,3:11:24.08:506,24,0	1/1:7,0:8:21.03:404,21,0	0/0:15,0:14:17.77:0,18,221	1/1:3,7:10:24.08:526,24,0	1/1:19,2:20:21.03:361,21,0	1/1:7,1:10:18.06:348,18,0	1/1:12,0:11:20.98:277,21,0	1/1:13,0:13:32.96:479,33,0	1/1:5,0:5:9.86:143,10,0	1/1:0,1:1:3.01:68,3,0	1/1:1,1:11:6.02:105,6,0	1/1:5,0:7:5.81:34,6,0	1/1:2,4:9:15.05:240,15,0	1/1:15,4:20:30.09:553,30,0	1/1:10,1:15:23.91:432,24,0	1/1:4,0:3:6.02:114,6,0
chr10	31428857	.	TTTC	T	15954.27	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=4.890;DP=487;FS=12.873;HRun=0;HaplotypeScore=123.3537;InbreedingCoeff=0.9874;MQ=72.37;MQ0=6;MQRankSum=-7.830;QD=41.87;ReadPosRankSum=3.208;VQSLOD=5.6081;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,24:26:60.04:1007,60,0	1/1:1,7:8:24.08:419,24,0	0/0:30,0:19:47.79:0,48,951	0/0:40,0:24:61.72:0,62,1125	1/1:1,25:26:63.11:1076,63,0	1/1:0,10:10:24.08:404,24,0	1/1:1,9:10:24.08:405,24,0	1/1:1,34:34:96.31:1646,96,0	0/0:15,0:15:39.12:0,39,868	1/1:1,14:15:42.14:740,42,0	1/1:0,15:15:34:556,34,0	1/1:0,12:12:33.11:558,33,0	1/1:0,15:15:42.01:705,42,0	1/1:0,15:15:42.14:679,42,0	0/0:21,0:21:54.13:0,54,1213	1/1:2,13:15:39.13:665,39,0	1/1:0,18:18:32.40:575,32,0	1/1:0,13:13:39.13:686,39,0	1/1:0,14:14:42.14:736,42,0	1/1:0,16:16:36.12:592,36,0	1/1:0,16:16:35.78:624,36,0	1/1:1,12:13:33.11:572,33,0	1/1:0,15:15:41.95:669,42,0	1/1:0,20:20:11.79:175,12,0	1/1:0,10:10:27.09:435,27,0	1/1:0,12:12:36.11:608,36,0	1/1:1,24:25:60.20:1053,60,0	1/1:0,7:7:21.07:369,21,0
chr10	31428864	.	TTCTCTCTCTCTCTCTCTC	T	4305.32	PASS	AC=34;AF=0.630;AN=54;BaseQRankSum=5.647;DP=474;FS=4.025;HRun=0;HaplotypeScore=274.6697;InbreedingCoeff=0.6651;MQ=67.21;MQ0=9;MQRankSum=-2.932;QD=17.94;ReadPosRankSum=1.761;VQSLOD=3.1787;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:26:2.98:42,3,0	1/1:7,1:8:5.99:171,6,0	0/0:28,0:17:10.28:0,10,179	0/0:37,0:21:2.39:0,2,95	1/1:23,0:24:5.79:150,6,0	1/1:8,0:9:3.01:125,3,0	./.	0/0:34,0:33:15.48:0,15,283	0/0:12,0:16:15.04:0,15,592	1/1:14,0:14:15.03:216,15,0	1/1:11,2:13:6.02:235,6,0	1/1:11,2:13:9.02:316,9,0	1/1:11,4:15:11.61:582,12,0	1/1:15,1:15:6.01:271,6,0	0/0:18,0:23:24.04:0,24,1668	1/1:12,2:14:9.02:307,9,0	0/0:16,1:17:1.36:0,1,3	1/1:13,0:13:3.01:50,3,0	0/0:16,0:16:12.04:0,12,377	0/0:14,0:14:9.03:0,9,282	0/0:18,0:18:15.97:0,16,304	1/1:9,2:11:9.02:317,9,0	1/1:11,5:15:18.06:746,18,0	1/1:16,1:18:2.97:125,3,0	1/1:10,1:11:3.01:100,3,0	1/1:9,2:11:6.02:275,6,0	0/0:23,0:22:39.10:0,39,1062	1/1:6,1:7:6.02:277,6,0
chr10	31429217	.	AAAACAAAC	A	4311.64	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=12.546;DP=787;FS=1.560;HRun=0;HaplotypeScore=194.4937;InbreedingCoeff=0.9860;MQ=63.58;MQ0=3;MQRankSum=-4.719;QD=34.77;ReadPosRankSum=-2.063;VQSLOD=4.1790;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:84.27:0,84,3098	0/0:10,0:10:30.10:0,30,1213	0/0:27,0:20:30.10:0,30,889	0/0:32,0:29:44.59:0,45,1423	0/0:40,0:40:93.32:0,93,3574	0/0:20,0:20:51.18:0,51,2019	0/0:24,0:24:57.20:0,57,2181	1/1:13,20:33:56.97:861,57,0	0/0:32,0:32:78.25:0,78,3058	0/0:38,0:38:81.28:0,81,3003	0/0:21,0:21:54.18:0,54,2115	0/0:30,0:30:72.24:0,72,2848	0/0:27,0:27:72.23:0,72,2619	0/0:29,0:29:75.26:0,75,3014	0/0:34,0:34:87.28:0,87,3346	0/0:40,0:40:93.32:0,93,3769	0/0:34,0:34:78.27:0,78,2936	0/0:31,0:31:69.20:0,69,2518	1/1:9,11:20:33.07:707,33,0	1/1:5,17:22:39.06:885,39,0	1/1:14,9:22:9.03:232,9,0	0/0:22,0:22:54.18:0,54,2092	0/0:29,0:29:69.23:0,69,2463	0/0:35,0:35:81.28:0,81,3228	0/0:18,0:17:36.12:0,36,1397	0/0:34,0:35:87.30:0,87,3423	1/1:3,23:26:62.92:1626,63,0	0/0:16,0:16:36.59:0,37,1414
chr10	31430873	.	GACACACACAGAC	G	4394.15	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=13.143;DP=880;FS=1.455;HRun=0;HaplotypeScore=279.4642;InbreedingCoeff=0.9548;MQ=62.32;MQ0=14;MQRankSum=-1.928;QD=30.73;ReadPosRankSum=-4.143;VQSLOD=3.4611;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,147,6938	0/0:13,0:13:39.12:0,39,1937	0/0:48,0:23:32.45:0,32,657	0/0:57,0:35:68.62:0,69,1363	0/0:28,0:28:75.21:0,75,3779	0/0:26,0:26:69.24:0,69,3436	0/0:18,0:18:42.13:0,42,1760	1/1:4,34:37:99:1365,102,0	0/0:24,0:24:72.25:0,72,3666	0/0:37,0:37:99:0,101,4723	0/0:27,0:27:72.25:0,72,3738	0/0:39,0:39:99:0,114,4968	0/0:33,0:33:96.33:0,96,5512	0/0:25,0:25:69.22:0,69,3267	0/0:28,0:28:78.25:0,78,3644	0/0:29,0:29:84.27:0,84,4210	0/0:44,0:44:99:0,99,4853	0/0:27,0:27:75.19:0,75,2920	1/1:3,14:17:42.11:726,42,0	1/1:3,33:36:45.15:1177,45,0	1/1:8,26:31:2.53:109,3,0	0/0:28,0:28:63.20:0,63,3154	0/0:25,0:25:66.23:0,66,3147	0/0:40,0:40:99:0,108,5482	0/0:26,0:26:75.24:0,75,3610	0/0:37,0:36:99:0,99,4302	1/1:0,18:18:29.99:1017,30,0	0/0:21,0:21:63.22:0,63,3641
chr10	31431573	.	TACACACAAACACACACACACAC	T	5096.39	PASS	AB=0.556;AC=37;AF=0.661;AN=56;BaseQRankSum=5.482;DP=455;FS=1.034;HRun=0;HaplotypeScore=198.2865;InbreedingCoeff=0.8061;MQ=76.48;MQ0=12;MQRankSum=-3.060;QD=19.09;ReadPosRankSum=3.734;VQSLOD=3.8818;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:2,24:26:3.01:46,3,0	1/1:0,8:8:2.54:56,3,0	0/0:35,0:26:33.76:0,34,505	0/0:29,0:20:15.07:0,15,379	1/1:8,0:7:11.93:92,12,0	1/1:0,13:14:6.02:172,6,0	1/1:12,0:12:32.99:330,33,0	0/0:34,0:33:71.05:0,71,1322	0/0:9,0:9:21.01:0,21,935	1/1:2,12:14:29.90:371,30,0	0/1:2,8:10:0.27:0,0,0	1/1:12,0:13:31.64:545,32,0	1/1:8,0:8:15:219,15,0	1/1:6,0:7:17.95:411,18,0	0/0:14,0:14:33.08:0,33,1926	1/1:3,0:17:8.96:258,9,0	1/1:1,21:22:6.02:254,6,0	1/1:17,0:17:44.79:556,45,0	0/0:14,0:11:26.51:0,27,585	0/0:22,0:21:51.50:0,52,659	0/0:17,0:15:33:0,33,819	1/1:7,1:8:15.01:239,15,0	1/1:2,19:22:9.50:362,10,0	1/1:4,20:25:5.03:249,5,0	1/1:15,0:17:15.59:342,16,0	1/1:10,0:13:31.80:262,32,0	0/0:14,0:14:33.04:0,33,484	1/1:3,1:5:0.87:331,1,0
chr10	31431581	.	AACACACACAC	A	1032.01	PASS	AB=1.000;AC=31;AF=0.738;AN=42;BaseQRankSum=4.605;DP=415;FS=5.897;HRun=0;HaplotypeScore=126.6968;InbreedingCoeff=0.1708;MQ=61.76;MQ0=13;MQRankSum=-0.868;QD=3.77;ReadPosRankSum=-0.623;VQSLOD=2.1249;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:26,0:17:0.89:0,1,2	./.	./.	1/1:14,0:14:3:27,3,0	./.	0/1:33,0:32:11.44:11,0,44	0/0:8,0:8:15.05:0,15,499	1/1:12,0:12:3.01:54,3,0	0/1:9,0:9:0:0,0,0	1/1:12,0:12:4.26:73,4,0	./.	1/1:8,0:7:2.63:69,3,0	0/0:15,0:15:24.04:0,24,885	1/1:15,0:15:6.02:139,6,0	1/1:21,0:21:5.87:36,6,0	0/1:15,0:15:29.46:89,0,29	1/1:12,0:8:2.80:13,3,0	1/1:7,13:21:29.01:170,29,0	0/1:19,0:17:8.03:99,0,8	1/1:6,0:6:2.94:18,3,0	1/1:21,0:21:8.47:55,8,0	0/1:23,0:23:16.18:62,0,16	1/1:15,0:15:0.36:1,0,0	./.	1/1:11,1:13:6.02:147,6,0	1/1:4,0:4:5.72:92,6,0
chr10	31432045	.	A	AG	19429.99	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-12.431;DP=735;FS=8.316;HRun=1;HaplotypeScore=92.3252;InbreedingCoeff=0.9996;MQ=84.79;MQ0=0;MQRankSum=-2.609;QD=40.23;ReadPosRankSum=5.382;VQSLOD=4.8021;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,50:50:99:2008,135,0	1/1:0,11:11:33.11:494,33,0	0/0:27,0:28:71.70:0,72,863	0/0:19,0:19:48.15:0,48,610	1/1:0,24:24:66.14:958,66,0	1/1:1,25:26:66.22:989,66,0	1/1:0,26:26:69.23:1034,69,0	0/0:25,0:25:66.19:0,66,810	0/0:22,0:22:66.18:0,66,816	1/1:0,27:27:78.25:1147,78,0	1/1:0,19:19:51.17:762,51,0	1/1:0,39:39:99:1618,108,0	1/1:1,28:29:69.23:1033,69,0	1/1:0,30:30:81.27:1213,81,0	0/0:30,0:30:90.25:0,90,1124	1/1:1,23:24:24.27:860,24,0	1/1:0,32:32:90.30:1348,90,0	1/1:1,21:22:57.19:854,57,0	0/0:15,0:15:42.03:0,42,457	0/0:21,0:21:63.11:0,63,766	0/0:61,0:61:99:0,178,2270	1/1:1,17:18:54.07:756,54,0	1/1:0,21:21:51.17:763,51,0	1/1:0,25:25:69.23:1033,69,0	1/1:0,24:24:66.22:988,66,0	1/1:0,23:23:69.23:1033,69,0	0/0:31,0:30:93.29:0,93,1192	1/1:0,13:13:36.12:539,36,0
chr10	31432366	.	AGTGTGT	A	16062.85	PASS	AB=0.628;AC=46;AF=0.821;AN=56;BaseQRankSum=8.058;DP=757;FS=5.940;HRun=0;HaplotypeScore=205.2204;InbreedingCoeff=0.6828;MQ=59.11;MQ0=7;MQRankSum=-10.001;QD=25.66;ReadPosRankSum=-1.061;VQSLOD=3.6561;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:17,19:38:48.65:639,0,49	1/1:7,5:13:8.99:125,9,0	0/0:36,0:24:9:0,9,192	0/0:32,0:24:12.01:0,12,133	1/1:5,13:18:27.09:492,27,0	1/1:7,19:27:48.16:988,48,0	1/1:6,20:26:54.10:974,54,0	1/1:25,0:36:30.50:278,30,0	0/0:24,0:25:51.17:0,51,1560	1/1:11,17:29:54.18:1114,54,0	1/1:8,14:23:33.08:605,33,0	1/1:13,36:51:90.26:1756,90,0	1/1:10,21:33:66.22:1296,66,0	1/1:7,19:26:39.13:794,39,0	0/0:34,1:38:30.28:0,30,2592	1/1:6,18:24:42.14:883,42,0	1/1:11,9:19:21.07:442,21,0	0/1:4,7:11:53.87:358,0,54	1/1:15,0:22:13.63:245,14,0	1/1:12,0:40:57.19:798,57,0	1/1:17,0:32:8.69:126,9,0	1/1:11,11:22:33.06:478,33,0	1/1:11,14:26:18.46:348,18,0	1/1:9,7:17:6.02:97,6,0	1/1:4,13:17:30.10:581,30,0	1/1:10,21:31:63.21:1304,63,0	1/1:6,0:29:54.18:755,54,0	1/1:2,11:13:33.04:587,33,0
chr10	31432774	.	C	CAAAAAAAA	11520.84	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=8.026;DP=597;FS=20.650;HRun=6;HaplotypeScore=126.0212;InbreedingCoeff=0.9296;MQ=74.36;MQ0=0;MQRankSum=-8.523;QD=30.97;ReadPosRankSum=-3.387;VQSLOD=0.1800;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:6,1:37:30.10:945,30,0	1/1:3,0:3:5.86:131,6,0	0/0:30,0:28:13:0,13,1168	0/0:19,0:18:14.99:0,15,641	1/1:13,0:14:18.01:268,18,0	1/1:0,1:27:36.12:1132,36,0	1/1:0,0:23:15.05:475,15,0	0/0:32,0:32:87.25:0,87,1876	0/0:19,0:19:54.16:0,54,1254	1/1:4,0:19:41.54:884,42,0	1/1:11,0:10:24.08:501,24,0	1/1:2,0:24:23.94:759,24,0	1/1:0,2:19:18.06:637,18,0	1/1:2,1:22:30.57:931,31,0	0/0:29,0:29:81.22:0,81,1806	1/1:0,1:23:24.99:774,25,0	1/1:3,0:16:21.07:616,21,0	1/1:2,0:15:19.61:465,20,0	0/0:18,0:18:42.02:0,42,732	0/0:18,0:18:39.07:0,39,863	0/0:20,0:20:45.07:0,45,962	1/1:5,0:22:30.01:500,30,0	1/1:2,0:26:12.51:212,13,0	1/1:2,0:18:9.03:285,9,0	1/1:13,0:13:30.06:649,30,0	1/1:7,1:27:54.63:1261,55,0	0/0:39,0:39:99:0,114,2640	1/1:0,0:10:3.01:95,3,0
chr10	31435756	.	T	TAGG	5774.62	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-3.879;DP=604;FS=5.197;HRun=0;HaplotypeScore=110.7506;InbreedingCoeff=0.9683;MQ=72.93;MQ0=0;MQRankSum=-1.860;QD=51.56;ReadPosRankSum=-3.212;VQSLOD=6.2382;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,120,1882	0/0:8,0:8:21.07:0,21,355	0/0:11,0:10:6.80:0,7,167	0/0:12,0:13:16.30:0,16,282	0/0:22,0:22:54.18:0,54,912	0/0:15,0:15:42.14:0,42,711	0/0:28,0:28:81.27:0,81,1351	1/1:9,14:26:63.13:1308,63,0	0/0:23,0:23:69.21:0,69,1118	0/0:22,0:22:51.11:0,51,804	0/0:15,0:15:45.15:0,45,728	0/0:27,0:27:75.24:0,75,1246	0/0:19,0:19:54.17:0,54,888	0/0:19,0:19:54.17:0,54,886	0/0:19,0:19:57.18:0,57,921	0/0:20,0:20:60.18:0,60,958	0/0:43,0:43:99:0,120,1959	0/0:34,0:34:90.27:0,90,1491	1/1:6,22:30:84.24:1700,84,0	1/1:2,14:16:42.14:916,42,0	1/1:3,7:10:12.04:269,12,0	0/0:15,0:15:42.08:0,42,645	0/0:13,0:13:39.12:0,39,635	0/0:28,0:28:81.26:0,81,1302	0/0:10,0:10:30.10:0,30,512	0/0:24,0:24:72.21:0,72,1152	1/1:3,26:30:69.24:1582,69,0	0/0:22,0:22:66.23:0,66,1126
chr10	31436121	.	C	CGG	4500.20	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-1.691;DP=660;FS=0.000;HRun=3;HaplotypeScore=136.7581;InbreedingCoeff=0.9990;MQ=80.18;MQ0=2;MQRankSum=-5.023;QD=45.00;ReadPosRankSum=-1.830;VQSLOD=3.6434;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:57:99:0,153,2098	0/0:12,0:12:36.10:0,36,486	0/0:21,0:21:60.19:0,60,801	0/0:16,0:16:48.16:0,48,645	0/0:29,0:29:87.28:0,87,1199	0/0:26,0:26:75.22:0,75,1014	0/0:27,0:27:78.26:0,78,1092	1/1:5,22:27:69.22:1182,69,0	0/0:23,0:23:63.21:0,63,881	0/0:31,0:31:87.29:0,87,1216	0/0:9,0:9:27.09:0,27,378	0/0:26,0:26:75.23:0,75,1028	0/0:31,0:31:90.30:0,90,1257	0/0:20,0:19:45.11:0,45,609	0/0:23,0:22:63.21:0,63,881	0/0:20,0:20:54.18:0,54,756	0/0:31,0:31:78.26:0,78,1091	0/0:26,0:26:66.22:0,66,920	1/1:6,16:22:54.18:964,54,0	1/1:3,14:17:39.13:712,39,0	1/1:0,11:11:24.08:437,24,0	0/0:22,0:22:63.17:0,63,856	0/0:33,0:33:93.29:0,93,1281	0/0:28,0:28:78.26:0,78,1091	0/0:11,0:11:27.09:0,27,378	0/0:25,0:25:69.21:0,69,946	1/1:0,23:23:66.23:1205,66,0	0/0:12,0:12:36.12:0,36,504
chr10	31436155	.	TTA	T	18448.02	PASS	AB=0.514;AC=37;AF=0.661;AN=56;BaseQRankSum=-4.803;DP=648;FS=9.410;HRun=0;HaplotypeScore=102.2619;InbreedingCoeff=0.9084;MQ=76.36;MQ0=2;MQRankSum=-1.360;QD=40.90;ReadPosRankSum=5.867;VQSLOD=6.3130;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,59:58:99:2432,160,0	1/1:1,13:14:36.08:551,36,0	0/0:14,0:14:39.07:0,39,626	0/0:15,0:15:42.08:0,42,707	1/1:1,27:28:78.18:1142,78,0	1/1:0,18:18:54.18:827,54,0	1/1:1,23:24:63.21:964,63,0	0/0:35,0:35:96.26:0,96,1679	0/0:25,0:25:75.24:0,75,1383	1/1:1,36:37:99:1676,111,0	1/1:0,13:13:33.07:479,33,0	1/1:1,24:25:72.24:1102,72,0	1/1:0,23:23:63.21:965,63,0	1/1:1,20:20:46.04:690,46,0	0/0:28,0:28:84.26:0,84,1518	0/1:1,18:19:11.79:598,0,12	1/1:0,31:31:78.26:1194,78,0	1/1:0,27:27:72.24:1096,72,0	0/0:27,0:27:78.27:0,78,1464	0/0:18,0:18:54.19:0,54,1006	0/0:15,0:15:45.12:0,45,767	1/1:0,21:21:60.20:919,60,0	1/1:0,26:26:75.25:1148,75,0	1/1:0,30:30:78.26:1194,78,0	1/1:0,8:8:18.06:276,18,0	1/1:0,25:25:75.22:1103,75,0	0/0:20,0:20:60.21:0,60,1131	1/1:0,2:2:6.02:92,6,0
chr10	31436538	.	G	GC	6399.54	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-13.771;DP=641;FS=2.021;HRun=0;HaplotypeScore=63.1512;InbreedingCoeff=0.9989;MQ=85.75;MQ0=0;MQRankSum=-1.276;QD=42.10;ReadPosRankSum=-3.379;VQSLOD=4.0031;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,132,1842	0/0:8,0:8:24.08:0,24,335	0/0:25,0:25:66.20:0,66,890	0/0:18,0:18:54.08:0,54,683	0/0:16,0:16:48.16:0,48,671	0/0:14,0:14:42.14:0,42,587	0/0:28,0:28:84.28:0,84,1174	1/1:2,32:34:96.28:1452,96,0	0/0:15,0:15:42.12:0,42,569	0/0:20,0:20:57.19:0,57,795	0/0:14,0:14:39.13:0,39,545	0/0:32,0:32:96.32:0,96,1341	0/0:10,0:10:30.08:0,30,400	0/0:29,0:29:84.25:0,84,1139	0/0:22,0:22:66.22:0,66,923	0/0:26,0:26:75.25:0,75,1047	0/0:35,0:35:99:0,105,1468	0/0:20,0:20:60.20:0,60,839	1/1:1,25:26:78.22:1217,78,0	1/1:2,21:23:63.21:997,63,0	1/1:0,45:45:99:1726,108,0	0/0:20,0:20:57.19:0,57,795	0/0:21,0:21:57.18:0,57,779	0/0:29,0:29:87.29:0,87,1215	0/0:13,0:13:39.13:0,39,545	0/0:19,0:19:57.18:0,57,782	1/1:1,23:24:63.21:1007,63,0	0/0:9,0:9:24.08:0,24,336
chr10	31437049	.	C	CAATAATAATAAT	16937.05	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-1.311;DP=337;FS=0.000;HRun=0;HaplotypeScore=102.4945;InbreedingCoeff=0.6985;MQ=67.68;MQ0=0;MQRankSum=-7.858;QD=61.14;ReadPosRankSum=-2.758;VQSLOD=3.8057;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,15:26:36.12:1658,36,0	1/1:7,0:7:3.01:177,3,0	0/0:12,0:11:11.39:0,11,95	0/0:11,0:11:2.18:0,2,142	1/1:6,2:9:12.04:533,12,0	1/1:5,10:15:27.09:1430,27,0	1/1:5,0:5:9.03:244,9,0	1/1:29,0:29:48.14:1802,48,0	0/0:15,0:15:33.10:0,33,1001	1/1:6,0:6:9.03:317,9,0	1/1:11,0:11:6.01:77,6,0	1/1:13,3:16:12.04:659,12,0	1/1:5,4:9:9.03:393,9,0	1/1:4,1:5:9.03:526,9,0	0/0:22,0:22:45.13:0,45,1422	1/1:4,7:12:9.03:532,9,0	1/1:9,6:15:21.07:1027,21,0	1/1:8,10:19:15.05:770,15,0	1/1:9,0:9:18.06:362,18,0	1/1:9,0:15:15.05:768,15,0	1/1:3,1:4:6.02:228,6,0	1/1:5,0:5:9.03:375,9,0	1/1:6,0:6:6.02:319,6,0	1/1:4,0:4:9.03:512,9,0	1/1:7,9:16:30.10:1490,30,0	1/1:6,8:16:27.09:1011,27,0	1/1:8,0:9:21.06:744,21,0	1/1:5,4:9:24.01:982,24,0
chr10	31437148	.	G	GCACA	1137.67	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=7.881;DP=575;FS=4.172;HRun=0;HaplotypeScore=108.9736;InbreedingCoeff=0.9670;MQ=67.02;MQ0=1;MQRankSum=-3.651;QD=14.40;ReadPosRankSum=-3.767;VQSLOD=2.6222;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:41:99:0,108,1736	0/0:8,0:8:24.07:0,24,378	0/0:28,0:18:26.30:0,26,412	0/0:33,0:24:33.11:0,33,629	0/0:22,0:22:57.18:0,57,911	0/0:22,0:22:51.16:0,51,843	0/0:19,0:20:48.12:0,48,721	1/1:19,0:19:15.92:139,16,0	0/0:11,0:11:27.09:0,27,452	0/0:22,0:22:48.07:0,48,746	0/0:11,0:11:33.06:0,33,458	0/0:20,0:20:51.17:0,51,858	0/0:22,0:22:51.14:0,51,798	0/0:10,0:10:21.06:0,21,313	0/0:24,0:24:57.15:0,57,884	0/0:19,0:19:45.15:0,45,733	0/0:40,0:40:99:0,102,1681	0/0:18,0:18:36.07:0,36,546	1/1:5,5:10:8.11:142,8,0	1/1:8,2:10:10.56:171,11,0	1/1:20,4:26:24.96:366,25,0	0/0:19,0:19:48.16:0,48,782	0/0:14,0:14:30.07:0,30,448	0/0:19,0:19:51.17:0,51,860	0/0:18,0:18:39.11:0,39,633	0/0:23,0:23:54.16:0,54,859	1/1:9,4:14:22.89:487,23,0	0/0:32,0:32:75.19:0,75,1176
chr10	31439298	.	T	TGAC	5109.93	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-7.565;DP=894;FS=19.126;HRun=0;HaplotypeScore=119.1596;InbreedingCoeff=0.9995;MQ=69.16;MQ0=0;MQRankSum=1.256;QD=32.76;ReadPosRankSum=-1.096;VQSLOD=3.7884;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:69,0:69:99:0,168,2180	0/0:12,0:12:24.07:0,24,332	0/0:27,0:24:45.11:0,45,578	0/0:29,0:27:50.93:0,51,576	0/0:41,0:41:99:0,105,1344	0/0:20,0:20:51.14:0,51,728	0/0:27,0:27:54.06:0,54,710	1/1:9,32:42:95.65:1244,96,0	0/0:37,0:37:80.82:0,81,1114	0/0:29,0:29:63.14:0,63,838	0/0:27,0:27:57.12:0,57,742	0/0:46,0:46:99:0,114,1590	0/0:29,0:29:75.15:0,75,999	0/0:26,0:26:54.11:0,54,697	0/0:43,0:43:99:0,99,1299	0/0:40,0:40:99:0,102,1386	0/0:28,0:28:66.20:0,66,932	0/0:45,0:45:99:0,123,1749	1/1:7,16:24:50.70:770,51,0	1/1:9,20:30:60.12:1171,60,0	1/1:7,26:33:57.20:1180,57,0	0/0:27,0:27:60.16:0,60,825	0/0:22,0:22:54.10:0,54,713	0/0:35,0:35:87.22:0,87,1193	0/0:21,0:21:42.08:0,42,541	0/0:36,0:36:90.25:0,90,1222	1/1:5,22:27:36.12:744,36,0	0/0:22,0:22:57.16:0,57,796
chr10	31447203	.	A	AAG	27832.09	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-12.145;DP=687;FS=11.831;HRun=0;HaplotypeScore=65.6550;InbreedingCoeff=0.9996;MQ=76.91;MQ0=4;MQRankSum=-4.474;QD=46.46;ReadPosRankSum=4.045;VQSLOD=5.8413;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,40:43:99:1837,102,0	1/1:1,13:14:36.12:641,36,0	0/0:25,0:25:66.13:0,66,901	0/0:22,0:22:47.89:0,48,624	1/1:3,27:29:72.25:1302,72,0	1/1:1,27:28:72.25:1320,72,0	1/1:1,19:20:51.17:935,51,0	1/1:1,26:29:81.22:1336,81,0	0/0:18,0:18:51.16:0,51,715	1/1:3,32:35:96.30:1665,96,0	1/1:1,24:25:66.23:1191,66,0	1/1:2,26:30:69.24:1240,69,0	1/1:1,24:25:63.22:1155,63,0	1/1:0,23:23:57.20:1045,57,0	0/0:23,0:23:66.22:0,66,945	1/1:0,13:13:39.13:715,39,0	1/1:1,28:30:78.27:1430,78,0	1/1:0,21:21:60.21:1099,60,0	1/1:0,15:16:48.15:850,48,0	1/1:1,17:17:45.15:825,45,0	1/1:3,25:28:60.21:1100,60,0	1/1:0,31:31:93.32:1704,93,0	1/1:0,26:25:66.23:1210,66,0	1/1:2,28:30:72.25:1319,72,0	1/1:1,25:25:66.23:1209,66,0	1/1:1,25:27:78.23:1347,78,0	1/1:3,16:21:48.16:875,48,0	1/1:0,9:10:27.09:483,27,0
chr10	31447774	.	AGG	A	2128.04	PASS	AB=0.875;AC=46;AF=0.821;AN=56;BaseQRankSum=-2.340;DP=287;FS=2.588;HRun=3;HaplotypeScore=57.9431;InbreedingCoeff=0.4886;MQ=49.02;MQ0=24;MQRankSum=0.676;QD=8.62;ReadPosRankSum=2.328;VQSLOD=0.7304;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:12:6.41:43,6,0	0/1:2,1:3:1.82:26,0,2	0/0:8,0:5:8.50:0,9,72	0/0:10,0:6:7.41:0,7,64	1/1:6,0:5:5.89:43,6,0	1/1:9,0:9:5.28:45,5,0	1/1:15,0:14:30.73:268,31,0	1/1:7,7:14:23.39:176,23,0	0/1:8,0:6:4.99:5,0,58	1/1:14,0:11:28.28:219,28,0	1/1:11,0:11:5.33:41,5,0	1/1:17,0:15:21.25:161,21,0	1/1:14,0:11:7.21:41,7,0	1/1:12,0:9:5.49:31,5,0	0/0:11,0:10:14.90:0,15,104	1/1:8,0:8:13.81:121,14,0	1/1:6,0:5:9.78:70,10,0	1/1:5,0:5:1.62:54,2,0	1/1:5,0:4:11.96:102,12,0	1/1:8,1:7:11.10:88,11,0	1/1:10,0:8:8.52:74,9,0	1/1:14,0:11:11.64:94,12,0	1/1:15,0:12:8.44:66,8,0	1/1:8,0:6:9.23:75,9,0	1/1:5,0:5:11.94:93,12,0	1/1:11,0:11:30.03:297,30,0	1/1:3,7:7:3.01:38,3,0	0/0:10,0:5:2.10:0,2,9
chr10	31447785	.	G	GAC	1382.17	PASS	AB=0.834;AC=36;AF=0.643;AN=56;BaseQRankSum=2.025;DP=300;FS=0.956;HRun=0;HaplotypeScore=58.9467;InbreedingCoeff=0.0181;MQ=38.57;MQ0=38;MQRankSum=1.577;QD=5.76;ReadPosRankSum=2.081;VQSLOD=2.4636;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:10,8:12:7.36:83,0,7	0/1:2,1:3:2.36:38,0,2	0/0:12,0:4:5.99:0,6,51	0/0:14,0:2:3:0,3,27	1/1:5,2:5:2.88:15,3,0	1/1:4,6:10:1.85:103,2,0	1/1:12,0:11:11.75:128,12,0	0/1:16,0:13:21.89:22,0,28	0/0:7,0:5:6.88:0,7,44	0/1:6,9:13:46.75:147,0,47	1/1:3,7:10:4.72:38,5,0	0/1:13,2:13:31.72:116,0,32	0/1:10,4:11:32.75:33,0,44	1/1:5,7:7:6.02:93,6,0	0/0:15,0:11:5.58:0,6,50	0/1:5,0:5:8.58:34,0,9	1/1:6,1:6:7.97:91,8,0	0/1:2,3:5:7.64:49,0,8	0/1:5,0:5:12.04:12,0,17	1/1:14,0:11:12.22:82,12,0	1/1:8,0:6:2.81:25,3,0	1/1:6,6:8:2.70:35,3,0	1/1:10,5:12:3.48:36,3,0	1/1:8,0:6:8.97:104,9,0	1/1:4,0:4:2.96:23,3,0	1/1:12,0:11:12.94:221,13,0	0/1:10,0:7:13.35:13,0,14	0/0:12,0:6:12.71:0,13,78
chr10	31447789	.	G	GAC	357.15	PASS	AB=0.962;AC=24;AF=0.429;AN=56;BaseQRankSum=1.905;DP=281;FS=39.965;HRun=0;HaplotypeScore=55.2487;InbreedingCoeff=-0.0461;MQ=35.54;MQ0=40;MQRankSum=-1.701;QD=1.85;ReadPosRankSum=1.158;VQSLOD=0.1279;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:16,0:10:9.30:18,0,9	0/0:3,0:3:4.79:0,5,48	0/0:10,0:2:2.92:0,3,17	0/0:16,0:1:3:0,3,26	0/0:7,0:5:2.39:0,2,13	0/1:8,0:8:10.14:31,0,10	0/0:10,0:9:2.80:0,3,28	0/1:16,0:12:44.88:66,0,45	0/0:5,0:3:4.30:0,4,20	0/0:16,0:13:0.33:0,0,119	1/1:9,0:9:3.53:11,4,0	0/1:13,0:11:26.33:26,0,51	0/1:14,0:11:2.04:2,0,55	1/1:9,0:5:5.92:39,6,0	0/1:14,0:10:0.18:0,0,0	0/0:5,0:5:1.54:0,2,15	0/1:7,0:5:16.90:17,0,21	0/1:5,0:5:7.66:8,0,53	0/1:5,1:5:14.18:64,0,14	0/1:9,4:10:2.16:51,0,2	1/1:8,0:6:0.29:2,0,0	1/1:12,0:8:1.91:7,2,0	1/1:15,0:12:2.22:7,2,0	0/1:8,0:6:4.27:4,0,5	0/0:3,0:3:0.47:0,0,1	0/1:10,1:10:8.27:75,0,8	1/1:8,1:6:5.38:64,5,0	0/0:12,0:6:14.81:0,15,98
chr10	31448111	.	G	GT	226.35	PASS	AB=0.962;AC=26;AF=0.481;AN=54;BaseQRankSum=2.893;DP=213;FS=15.313;HRun=0;HaplotypeScore=67.1588;InbreedingCoeff=0.0776;MQ=57.18;MQ0=17;MQRankSum=-0.759;QD=1.68;ReadPosRankSum=-3.322;VQSLOD=-0.1961;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:13,1:11:23.81:29,0,24	0/0:6,0:6:1.87:0,2,43	0/1:14,1:7:5.25:5,0,91	0/0:30,1:11:15.62:0,16,108	0/1:3,0:3:0:0,0,0	1/1:12,0:8:6.82:29,7,0	1/1:2,0:1:2.74:12,3,0	0/1:7,0:6:32.07:32,0,142	0/0:5,0:3:4.26:0,4,44	0/1:4,0:2:3.38:11,0,3	0/0:5,0:3:0.57:0,1,2	0/1:8,0:8:2.29:15,0,2	0/0:12,0:8:5.53:0,6,46	1/1:4,0:4:2.90:16,3,0	0/0:1,0:1:0:0,0,0	1/1:5,0:3:2.88:18,3,0	1/1:7,0:5:1.18:15,1,0	0/0:2,0:1:0:0,0,0	0/1:2,0:3:22.04:22,0,74	0/1:6,0:6:6.29:6,0,17	1/1:13,0:13:5.89:38,6,0	1/1:8,0:7:2.83:26,3,0	0/0:7,0:5:2.54:0,3,15	0/0:5,1:5:0:0,0,0	./.	0/1:4,0:3:10.75:13,0,11	0/1:7,0:5:0.26:1,0,0	1/1:13,0:11:5.72:67,6,0
chr10	31448119	.	G	GT	998.22	PASS	AB=0.939;AC=29;AF=0.518;AN=56;BaseQRankSum=2.425;DP=314;FS=3.674;HRun=0;HaplotypeScore=86.2134;InbreedingCoeff=-0.1370;MQ=40.06;MQ0=24;MQRankSum=0.156;QD=3.77;ReadPosRankSum=-0.107;VQSLOD=2.9933;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:13,3:14:30.39:30,0,37	0/1:8,0:6:22.92:23,0,46	0/0:11,0:5:9.46:0,9,103	0/1:24,0:9:3.60:4,0,94	0/1:12,0:12:0.15:1,0,0	1/1:9,4:10:15.92:162,16,0	1/1:2,4:6:7.52:59,8,0	0/1:19,1:18:7.04:7,0,279	0/0:6,1:4:2.96:0,3,42	0/1:9,1:9:21.84:110,0,22	0/1:6,0:5:0.13:1,0,0	0/1:9,4:13:14.22:103,0,14	0/1:11,2:9:29.90:30,0,108	1/1:2,4:6:3.01:36,3,0	0/0:5,0:2:0:0,0,0	1/1:3,3:4:2.68:37,3,0	0/1:7,1:8:2.65:68,0,3	0/0:3,0:1:3.01:0,3,39	0/1:6,0:8:40.88:41,0,86	0/1:15,0:14:30.87:31,0,33	1/1:17,0:17:5.25:70,5,0	1/1:11,2:12:1.45:40,1,0	0/0:11,0:7:3.05:0,3,17	0/0:8,2:9:0:0,0,0	0/1:4,0:5:0:0,0,0	0/1:4,0:4:24.79:33,0,25	1/1:4,3:5:2.84:20,3,0	0/1:13,4:16:39.04:229,0,39
chr10	31448121	.	GA	G	550.93	PASS	AB=0.988;AC=25;AF=0.463;AN=54;BaseQRankSum=3.268;DP=339;FS=4.417;HRun=1;HaplotypeScore=94.7486;InbreedingCoeff=-0.0408;MQ=39.31;MQ0=28;MQRankSum=0.601;QD=2.45;ReadPosRankSum=1.519;VQSLOD=-0.4347;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,1:14:4:0,4,42	0/1:10,0:8:22.44:22,0,75	0/0:10,1:5:6.02:0,6,76	0/0:23,0:8:4.73:0,5,106	0/1:15,0:13:0.50:1,0,1	0/1:15,1:11:0.67:75,0,1	1/1:8,0:7:4.99:35,5,0	0/0:22,1:20:25.74:0,26,288	0/0:9,0:4:4.26:0,4,40	0/1:12,0:9:20.65:21,0,32	1/1:7,1:6:2.27:6,2,0	0/1:13,0:13:17.56:40,0,18	0/1:13,0:10:32.17:32,0,90	1/1:6,0:6:1.55:4,2,0	./.	0/0:9,0:7:5.07:0,5,47	1/1:10,0:8:0.86:12,1,0	0/0:3,0:1:3.01:0,3,34	0/1:10,0:10:47.19:47,0,85	0/1:16,2:15:11.95:61,0,12	1/1:20,1:18:5.98:46,6,0	1/1:16,1:15:5.59:46,6,0	0/0:12,2:8:2.93:0,3,18	0/1:10,0:9:0:0,0,0	0/1:6,0:6:0.04:1,0,0	0/1:5,0:4:8.58:81,0,9	0/1:8,0:6:13.84:18,0,14	0/1:18,0:16:40.49:143,0,40
chr10	31448129	.	GA	G	943.97	PASS	AB=0.962;AC=30;AF=0.556;AN=54;BaseQRankSum=4.492;DP=379;FS=3.502;HRun=1;HaplotypeScore=103.1212;InbreedingCoeff=-0.1754;MQ=28.07;MQ0=35;MQRankSum=0.883;QD=2.95;ReadPosRankSum=1.385;VQSLOD=0.0832;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:18,0:15:30.70:54,0,31	0/1:10,0:9:46.40:46,0,72	0/0:5,0:3:2.98:0,3,22	0/0:17,0:4:5.99:0,6,57	0/1:15,2:15:0.66:1,0,1	1/1:15,0:12:11.63:103,12,0	1/1:9,1:9:6.03:67,6,0	0/1:24,2:23:25.45:25,0,322	0/0:12,0:6:4.25:0,4,39	0/1:17,0:13:31.98:32,0,94	1/1:5,2:6:3.78:15,4,0	0/1:16,0:16:17.78:60,0,18	0/1:15,0:11:49.23:49,0,94	1/1:9,0:7:3.48:37,3,0	./.	0/1:13,0:11:46.47:47,0,46	0/1:14,1:10:16.46:16,0,43	0/0:3,0:1:3.01:0,3,38	0/1:9,2:11:85.35:85,0,156	0/1:15,2:16:30.37:57,0,30	1/1:21,0:18:5.70:44,6,0	1/1:18,3:19:7.32:78,7,0	0/0:13,1:9:3.20:0,3,24	0/1:10,0:9:0:0,0,0	1/1:7,1:8:0.43:2,0,0	1/1:4,1:4:11.49:104,11,0	0/1:9,0:7:16.01:16,0,45	0/1:18,1:16:99:152,0,104
chr10	31448130	.	A	AGTG	1922.43	PASS	AB=0.949;AC=30;AF=0.577;AN=52;BaseQRankSum=3.160;DP=383;FS=3.693;HRun=0;HaplotypeScore=111.0579;InbreedingCoeff=-0.1358;MQ=28.10;MQ0=35;MQRankSum=-0.147;QD=6.22;ReadPosRankSum=0.828;VQSLOD=2.3958;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:20,0:15:44.52:82,0,45	0/1:8,2:9:39.85:74,0,40	./.	0/0:16,0:4:6.02:0,6,65	0/0:17,0:15:0.09:0,0,0	1/1:16,1:12:13.32:242,13,0	1/1:10,0:9:7.64:102,8,0	0/1:27,0:23:75.20:75,0,406	0/0:12,0:6:4.26:0,4,58	0/1:16,1:13:99:119,0,142	1/1:8,1:7:1.11:4,1,0	1/1:14,2:16:15.44:161,15,0	0/1:14,1:11:99:113,0,139	1/1:9,0:7:3.90:54,4,0	./.	0/1:13,0:11:57.65:58,0,86	0/1:17,0:12:42.97:43,0,92	0/0:3,0:1:3.01:0,3,51	0/1:11,0:11:99:170,0,215	0/1:19,1:17:44.33:105,0,44	1/1:23,0:18:6.36:70,6,0	1/1:21,1:19:4.89:111,5,0	0/0:16,0:9:3.20:0,3,50	0/1:10,0:9:0:0,0,0	1/1:8,0:8:3.26:8,3,0	1/1:4,2:5:11.71:201,12,0	0/1:8,0:7:16.92:17,0,67	0/1:16,3:16:94.55:261,0,95
chr10	31448143	.	G	GT	807.05	PASS	AB=0.936;AC=21;AF=0.404;AN=52;BaseQRankSum=3.384;DP=436;FS=14.530;HRun=0;HaplotypeScore=127.2579;InbreedingCoeff=-0.4169;MQ=26.76;MQ0=42;MQRankSum=-1.467;QD=2.37;ReadPosRankSum=1.166;VQSLOD=2.3350;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:23,1:19:45.74:50,0,46	0/1:10,2:10:22.95:23,0,164	./.	./.	0/1:18,4:20:0.42:1,0,0	0/1:22,1:18:73.36:73,0,127	0/1:12,1:12:48.30:77,0,48	0/1:26,3:25:99:149,0,420	0/0:16,0:9:10.43:0,10,58	0/1:20,2:18:64.60:65,0,323	0/1:12,1:11:1.59:10,0,2	0/1:21,0:20:74.98:75,0,137	0/1:14,0:11:17.35:17,0,131	1/1:10,0:8:1.97:32,2,0	0/0:9,0:2:2.68:0,3,11	0/1:16,0:14:34.81:35,0,116	0/0:22,0:17:19.49:0,19,311	0/0:4,0:2:6.02:0,6,73	0/1:7,2:9:62.52:97,0,63	0/1:20,1:18:35.66:67,0,36	0/1:21,1:17:33.57:34,0,36	1/1:26,0:23:0.13:65,0,0	0/0:17,1:11:6.73:0,7,45	0/0:13,0:11:3.01:0,3,34	0/0:10,1:11:6.14:0,6,41	0/1:11,0:10:12.07:12,0,224	0/1:10,0:8:8.14:8,0,155	0/1:20,0:16:58.67:59,0,296
chr10	31448144	.	GGA	G	166.12	PASS	AB=0.986;AC=13;AF=0.271;AN=48;BaseQRankSum=-2.306;DP=463;FS=15.629;HRun=0;HaplotypeScore=133.7891;InbreedingCoeff=0.3216;MQ=27.09;MQ0=40;MQRankSum=4.306;QD=1.11;ReadPosRankSum=-1.330;VQSLOD=1.5930;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:19:0:0,0,0	0/0:12,0:10:6.73:0,7,27	./.	./.	1/1:22,0:20:2.60:21,3,0	0/0:23,0:18:0.72:0,1,2	0/0:13,0:12:3.01:0,3,32	0/0:34,0:30:6.32:0,6,26	0/0:15,0:9:0:0,0,0	0/0:24,0:20:9.88:0,10,89	0/0:15,0:13:0:0,0,0	0/1:24,0:24:8.23:8,0,20	1/1:15,0:12:2.64:31,3,0	0/0:8,2:8:0:0,0,0	./.	1/1:14,2:14:8.84:84,9,0	0/1:22,1:18:15.06:77,0,15	0/0:4,0:3:3.01:0,3,42	0/0:16,0:16:6.80:0,7,53	0/0:22,0:19:0.47:0,0,1	./.	0/0:26,0:23:2.98:0,3,21	0/0:19,0:12:0:0,0,0	1/1:11,1:11:3.01:32,3,0	1/1:11,0:11:2.73:32,3,0	0/0:13,0:11:8.47:0,8,106	0/0:10,0:8:7.57:0,8,69	0/0:20,0:16:5.84:0,6,25
chr10	31449655	.	CGTGTGT	C	1672.19	PASS	AB=0.985;AC=45;AF=0.865;AN=52;BaseQRankSum=-0.254;DP=588;FS=1.162;HRun=0;HaplotypeScore=125.5305;InbreedingCoeff=0.1207;MQ=67.83;MQ0=16;MQRankSum=-0.085;QD=3.51;ReadPosRankSum=2.893;VQSLOD=2.3225;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:29,7:36:3.01:34,3,0	1/1:8,0:8:3.01:35,3,0	./.	./.	1/1:12,2:11:3.01:60,3,0	1/1:19,2:22:9.91:148,10,0	1/1:28,0:27:8.98:105,9,0	0/0:21,0:18:3.01:0,3,36	1/1:17,0:16:3.01:42,3,0	1/1:20,3:22:3.40:79,3,0	1/1:15,5:19:8.99:140,9,0	1/1:22,0:22:2.78:23,3,0	1/1:15,0:15:10.55:104,11,0	1/1:8,0:7:2.97:21,3,0	1/1:18,0:20:0.85:2,1,0	1/1:13,3:16:6.02:120,6,0	1/1:21,0:20:3.95:44,4,0	1/1:12,0:13:9.01:97,9,0	0/1:14,0:14:1.60:25,0,2	0/1:20,1:20:2.78:77,0,3	0/0:40,0:41:6.91:0,7,362	1/1:26,4:30:2.60:41,3,0	1/1:16,0:15:3:25,3,0	1/1:29,1:30:9:118,9,0	1/1:17,0:15:3:28,3,0	1/1:23,3:26:4.67:118,5,0	0/1:19,0:19:44.56:45,0,171	1/1:16,0:18:18.03:255,18,0
chr10	31450530	.	A	AGGAC	35906.66	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=7.095;DP=601;FS=1.859;HRun=0;HaplotypeScore=122.2438;InbreedingCoeff=0.9423;MQ=75.72;MQ0=0;MQRankSum=-12.085;QD=71.96;ReadPosRankSum=2.212;VQSLOD=7.0614;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,37:43:99:3086,108,0	1/1:0,6:6:18.06:519,18,0	0/0:21,0:21:57.19:0,57,1117	0/0:23,0:23:63.04:0,63,1149	1/1:3,11:17:24.08:691,24,0	1/1:3,13:16:39.13:1125,39,0	1/1:3,30:36:93.32:2673,93,0	1/1:15,15:33:93.27:2420,93,0	0/0:28,0:28:84.29:0,84,1739	1/1:4,10:17:45.13:1090,45,0	1/1:0,15:19:45.15:1295,45,0	1/1:3,20:27:60.21:1723,60,0	1/1:1,17:19:54.19:1544,54,0	1/1:1,22:23:69.24:1996,69,0	0/0:30,0:30:90.31:0,90,1880	1/1:0,27:27:78.27:2249,78,0	1/1:0,17:19:48.16:1390,48,0	1/1:0,21:23:60.16:1670,60,0	1/1:1,8:12:33.10:778,33,0	1/1:1,3:5:3.01:86,3,0	1/1:5,14:20:42.14:1177,42,0	1/1:4,18:23:57.20:1631,57,0	1/1:3,11:15:39.13:1031,39,0	1/1:1,31:33:84.29:2423,84,0	1/1:0,13:13:39.13:1124,39,0	1/1:2,21:24:72.24:2020,72,0	1/1:4,18:22:63.22:1818,63,0	1/1:1,4:6:12.04:347,12,0
chr10	31452176	.	GGT	G	191.30	PASS	AB=0.922;AC=12;AF=0.214;AN=56;BaseQRankSum=1.732;DP=544;FS=6.687;HRun=0;HaplotypeScore=81.5492;InbreedingCoeff=-0.2910;MQ=61.59;MQ0=10;MQRankSum=-0.569;QD=0.78;ReadPosRankSum=-0.886;VQSLOD=0.8235;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:30,1:31:28.08:28,0,307	0/0:6,0:6:9.02:0,9,115	0/0:31,0:16:3.01:0,3,36	0/0:21,0:15:3.48:0,3,33	0/0:23,1:24:42.02:0,42,523	0/1:19,2:21:15.03:15,0,186	0/1:12,6:18:52.91:84,0,53	0/0:20,0:18:17.74:0,18,116	0/1:17,1:18:28.19:28,0,307	0/0:22,0:22:10.03:0,10,212	0/1:20,0:20:11.99:12,0,301	0/1:12,0:11:31.87:32,0,143	0/1:12,4:16:17.44:17,0,143	0/0:6,0:12:12:0,12,105	0/0:19,0:19:36.07:0,36,485	0/1:17,1:18:3.12:3,0,350	0/1:28,2:28:26:26,0,429	0/0:17,0:17:20.88:0,21,261	0/0:18,0:17:15.38:0,15,136	0/0:3,0:21:20.42:0,20,152	0/0:12,0:12:8.99:0,9,78	0/0:12,0:25:15:0,15,131	0/1:15,0:14:11.85:12,0,224	0/1:25,1:28:5.06:5,0,455	0/1:15,2:17:70.03:70,0,203	0/0:24,0:25:15.81:0,16,268	0/0:14,0:14:11.98:0,12,108	0/0:11,0:12:6.86:0,7,208
chr10	31454880	.	TACAC	T	1824.62	PASS	AB=0.883;AC=40;AF=0.833;AN=48;BaseQRankSum=0.908;DP=489;FS=0.000;HRun=0;HaplotypeScore=95.8579;InbreedingCoeff=0.3378;MQ=56.76;MQ0=18;MQRankSum=0.261;QD=5.01;ReadPosRankSum=0.497;VQSLOD=1.6159;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:22,5:27:3.01:46,3,0	./.	./.	./.	0/1:12,3:15:0:0,0,0	1/1:16,7:23:10.59:143,11,0	1/1:14,7:21:15.05:231,15,0	0/0:27,0:26:2.88:0,3,15	0/0:11,0:11:18.04:0,18,370	0/1:13,0:13:8.13:29,0,8	1/1:18,0:18:3.01:44,3,0	1/1:13,3:16:6.01:92,6,0	1/1:12,5:17:9.02:138,9,0	1/1:9,1:11:3:28,3,0	0/0:17,0:18:15.04:0,15,198	1/1:10,8:18:3.90:302,4,0	1/1:17,6:23:14.94:208,15,0	1/1:20,6:25:9.03:139,9,0	1/1:8,0:9:3:28,3,0	1/1:15,0:15:6.01:57,6,0	./.	1/1:12,3:15:1.88:44,2,0	1/1:12,4:16:3.01:46,3,0	1/1:21,4:23:6.02:92,6,0	1/1:11,2:13:3:46,3,0	1/1:14,4:18:9.01:116,9,0	1/1:13,0:13:3:29,3,0	1/1:4,2:5:5.93:92,6,0
chr10	31456005	.	AT	A	3146.93	PASS	AB=0.875;AC=11;AF=0.196;AN=56;BaseQRankSum=11.282;DP=597;FS=2.168;HRun=9;HaplotypeScore=59.8393;InbreedingCoeff=0.9053;MQ=74.09;MQ0=0;MQRankSum=-3.084;QD=21.12;ReadPosRankSum=-0.289;VQSLOD=4.1845;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:63.18:0,63,721	0/0:9,0:9:24.07:0,24,277	0/0:13,0:13:27.02:0,27,274	0/0:14,0:15:26.91:0,27,266	0/0:29,1:30:56.78:0,57,906	0/0:29,1:30:59.79:0,60,942	0/0:20,0:20:51.14:0,51,578	1/1:7,39:47:99:1040,116,0	0/0:19,0:19:51.14:0,51,579	0/0:27,0:27:69.20:0,69,796	0/0:18,0:18:48.12:0,48,535	0/0:22,0:22:57.16:0,57,649	0/0:23,0:23:63.19:0,63,725	0/0:20,0:20:42.11:0,42,485	0/0:21,0:21:57.16:0,57,647	0/0:19,0:19:57.15:0,57,639	0/0:10,0:10:24.07:0,24,277	0/0:32,0:32:78.23:0,78,899	1/1:3,17:20:51.02:467,51,0	1/1:4,28:32:78.03:713,78,0	1/1:0,13:13:36.02:330,36,0	0/0:18,0:18:42.11:0,42,476	0/0:14,0:15:38.93:0,39,411	0/0:12,0:12:30.09:0,30,346	0/0:18,0:18:48.14:0,48,554	0/0:33,0:33:81.15:0,81,909	1/1:1,29:30:84.04:769,84,0	0/1:6,1:7:6.40:6,0,187
chr10	31460484	.	C	CGT	1739.81	PASS	AB=0.787;AC=16;AF=0.320;AN=50;BaseQRankSum=-5.725;DP=650;FS=1.326;HRun=0;HaplotypeScore=115.8422;InbreedingCoeff=0.0352;MQ=61.13;MQ0=9;MQRankSum=1.003;QD=5.39;ReadPosRankSum=-4.429;VQSLOD=1.0027;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:36,8:43:64.06:428,0,64	0/1:8,7:16:8.13:39,0,8	./.	./.	0/1:16,9:25:22.12:119,0,22	0/1:19,8:28:99:190,0,150	0/1:20,8:30:99:113,0,100	./.	0/0:13,0:13:11.96:0,12,102	1/1:28,0:28:8.96:281,9,0	0/1:10,4:14:13.13:36,0,13	0/0:12,0:28:33.73:0,34,166	0/0:9,0:16:11.32:0,11,55	0/0:10,0:20:20.08:0,20,120	1/1:11,6:18:6.02:79,6,0	1/1:7,0:7:11.98:113,12,0	0/1:14,15:29:58.84:279,0,59	0/0:13,0:30:17.58:0,18,153	0/0:20,0:18:2.83:0,3,14	0/0:20,0:20:0.89:0,1,2	0/1:35,0:35:0:1,0,0	0/0:6,0:16:2.84:0,3,14	0/0:19,0:22:5.90:0,6,39	0/0:22,0:45:28.36:0,28,201	0/1:12,2:17:30.60:33,0,31	0/1:19,9:30:64.87:179,0,65	0/0:21,0:21:14.20:0,14,70	0/0:9,0:9:5.95:0,6,42
chr10	31460514	.	TGTGTGTGTGTGTGCGC	T	2310.91	PASS	AB=0.594;AC=9;AF=0.167;AN=54;BaseQRankSum=4.626;DP=610;FS=4.156;HRun=0;HaplotypeScore=240.0413;InbreedingCoeff=0.7895;MQ=54.24;MQ0=14;MQRankSum=-1.387;QD=21.20;ReadPosRankSum=-2.189;VQSLOD=2.0314;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:41:78.27:0,78,3983	0/0:12,0:12:15.05:0,15,510	0/0:10,0:2:3.01:0,3,44	./.	0/0:17,0:16:26.98:0,27,1372	0/0:23,0:23:51.17:0,51,3054	0/0:38,0:38:84.29:0,84,3404	1/1:15,0:14:36.03:556,36,0	0/0:12,0:12:33.11:0,33,1672	0/0:24,0:24:68.04:0,68,2923	0/0:13,0:12:27.09:0,27,1195	0/0:27,0:27:64.46:0,64,2682	0/0:17,0:17:39.59:0,40,1386	0/0:26,0:26:54.18:0,54,2149	0/0:17,0:17:27.08:0,27,1012	0/0:10,0:8:18.06:0,18,866	0/0:33,0:32:68.03:0,68,2972	0/0:34,0:34:76.46:0,76,2731	0/1:6,13:18:49.58:731,0,50	1/1:2,20:22:6.96:181,7,0	1/1:29,0:29:15.54:248,16,0	0/0:22,0:22:30.57:0,31,707	0/0:22,0:22:36.10:0,36,1068	0/0:41,0:38:78.21:0,78,3294	0/0:16,0:15:29.81:0,30,1292	0/0:28,0:28:81.25:0,81,3350	1/1:3,21:24:18.46:751,18,0	0/0:7,0:7:21.07:0,21,790
chr10	31460526	.	TGCGC	T	1515.47	PASS	AB=1.000;AC=9;AF=0.167;AN=54;BaseQRankSum=6.083;DP=585;FS=8.336;HRun=0;HaplotypeScore=135.0780;InbreedingCoeff=0.7919;MQ=57.20;MQ0=13;MQRankSum=-0.245;QD=15.15;ReadPosRankSum=-1.526;VQSLOD=2.7225;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:42:84.18:0,84,1485	0/0:13,0:13:16.30:0,16,226	./.	0/0:8,0:2:2.82:0,3,22	0/0:15,0:14:18.06:0,18,351	0/0:22,0:22:48.10:0,48,915	0/0:39,0:39:87.30:0,87,1577	1/1:1,14:15:42.10:617,42,0	0/0:10,0:10:30.03:0,30,519	0/0:26,0:26:62.96:0,63,1050	0/0:11,0:11:24:0,24,325	0/0:26,0:26:33.80:0,34,652	0/0:15,0:15:28.14:0,28,361	0/0:24,0:24:51.14:0,51,690	0/0:16,0:16:24.05:0,24,319	0/0:12,0:10:21.03:0,21,331	0/0:30,0:29:59.82:0,60,1040	0/0:34,0:34:66.05:0,66,868	0/1:16,0:15:1.90:499,0,2	1/1:22,0:22:6.02:76,6,0	1/1:25,0:25:15.52:244,16,0	0/0:24,0:24:36.12:0,36,545	0/0:19,0:19:30.06:0,30,434	0/0:40,0:37:56.33:0,56,846	0/0:14,0:13:1.01:0,1,300	0/0:25,0:25:61.88:0,62,1070	1/1:22,0:22:18.06:234,18,0	0/0:9,0:9:24.02:0,24,319
chr10	31462007	.	C	CCACAGAGCAGTA	22389.75	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-2.831;DP=737;FS=4.714;HRun=0;HaplotypeScore=232.9766;InbreedingCoeff=0.9989;MQ=78.08;MQ0=0;MQRankSum=-16.871;QD=130.17;ReadPosRankSum=-2.224;VQSLOD=4.4066;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:93.30:0,93,3192	0/0:10,0:10:30.10:0,30,1112	0/0:28,0:28:75.23:0,75,2341	0/0:21,0:21:60.21:0,60,2060	0/0:22,0:22:54.19:0,54,1953	0/0:27,0:27:75.26:0,75,2669	0/0:22,0:22:66.21:0,66,2231	1/1:38,8:50:99:6943,141,0	0/0:25,0:25:75.24:0,75,2611	0/0:30,0:30:87.30:0,87,3206	0/0:36,0:36:99:0,108,3764	0/0:20,0:20:57.20:0,57,1925	0/0:28,0:28:75.24:0,75,2563	0/0:25,0:25:72.23:0,72,2401	0/0:27,0:27:81.26:0,81,2705	0/0:32,0:32:96.33:0,96,3443	0/0:17,0:17:51.15:0,51,1670	0/0:20,0:20:57.17:0,57,1892	1/1:9,6:15:39.13:1950,39,0	1/1:21,20:45:99:5773,99,0	1/1:3,6:13:21.07:1257,21,0	0/0:25,0:25:69.20:0,69,2420	0/0:27,0:27:72.25:0,72,2622	0/0:20,0:20:54.19:0,54,1894	0/0:24,0:24:69.23:0,69,2485	0/0:25,0:25:69.23:0,69,2479	1/1:19,27:49:99:6467,114,0	0/0:22,0:22:60.16:0,60,2090
chr10	31462557	.	A	ACTCTCT	754.84	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=3.483;DP=561;FS=12.912;HRun=0;HaplotypeScore=140.7500;InbreedingCoeff=0.6048;MQ=59.59;MQ0=11;MQRankSum=-0.532;QD=4.41;ReadPosRankSum=-1.935;VQSLOD=1.4023;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:34:27.03:0,27,864	0/0:8,0:8:14.89:0,15,213	0/0:12,0:5:2.94:0,3,32	0/0:17,0:10:6.02:0,6,116	0/0:22,0:21:29.80:0,30,495	0/0:18,0:18:35.58:0,36,638	0/0:26,0:26:30.10:0,30,551	1/1:34,0:34:25.37:253,25,0	1/1:17,0:17:20.97:211,21,0	0/0:21,0:20:39.12:0,39,723	0/0:16,0:16:27.08:0,27,505	0/0:21,0:21:35.85:0,36,664	0/0:19,0:18:27.07:0,27,459	0/0:12,0:12:15.03:0,15,246	0/0:9,12:21:2.24:0,2,30	0/0:9,0:9:12:0,12,222	0/0:22,0:21:48.15:0,48,856	0/1:24,0:24:10.14:10,0,545	0/1:22,0:21:29.52:71,0,30	1/1:26,0:26:17.72:152,18,0	1/1:12,0:12:11.35:83,11,0	0/0:18,0:18:30.08:0,30,549	0/0:17,0:17:12.04:0,12,223	0/0:23,0:22:36.12:0,36,681	0/0:36,0:36:51.62:0,52,959	0/1:22,0:22:5.21:5,0,269	1/1:14,0:14:6.89:141,7,0	0/0:17,0:16:20.17:0,20,422
chr10	31462588	.	CTGTGTGTG	C	580.26	PASS	AB=0.720;AC=5;AF=0.096;AN=52;BaseQRankSum=5.544;DP=573;FS=16.791;HRun=0;HaplotypeScore=150.7662;InbreedingCoeff=0.4341;MQ=49.30;MQ0=19;MQRankSum=-5.593;QD=11.16;ReadPosRankSum=-1.750;VQSLOD=1.6677;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:48:75.19:0,75,2371	0/0:8,0:8:7.58:0,8,125	./.	./.	0/0:23,0:20:36.12:0,36,1281	0/0:21,0:21:27.08:0,27,756	0/0:23,0:22:28.88:0,29,597	1/1:21,0:20:2.92:20,3,0	0/0:15,0:15:11.95:0,12,299	0/0:24,0:23:51.12:0,51,1325	0/0:17,0:17:27.08:0,27,766	0/0:22,0:21:27.08:0,27,761	0/0:22,0:20:20.89:0,21,636	0/0:16,0:16:30.10:0,30,996	0/0:22,0:21:9.92:0,10,252	0/0:15,0:15:30.10:0,30,926	0/0:31,0:29:46.95:0,47,1321	0/0:31,0:30:47.37:0,47,1322	1/1:7,6:12:1.51:267,2,0	0/0:21,2:23:8.01:0,8,59	0/0:11,0:11:3:0,3,25	0/0:21,0:21:33.11:0,33,876	0/0:15,0:15:12.04:0,12,288	0/0:27,0:26:42.12:0,42,1136	0/0:30,0:29:37.94:0,38,1239	0/0:24,0:24:51.17:0,51,1433	0/1:11,4:18:57.53:395,0,58	0/0:19,0:18:33.11:0,33,981
chr10	31464072	.	GGT	G	1593.70	PASS	AB=0.931;AC=36;AF=0.720;AN=50;BaseQRankSum=3.516;DP=624;FS=4.331;HRun=0;HaplotypeScore=86.7289;InbreedingCoeff=0.5035;MQ=69.78;MQ0=11;MQRankSum=4.429;QD=3.77;ReadPosRankSum=2.558;VQSLOD=2.0423;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:40,2:43:60.50:60,0,79	1/1:2,2:4:6.02:64,6,0	./.	./.	0/0:19,4:23:21.05:0,21,269	1/1:19,0:19:11.86:111,12,0	1/1:20,0:22:8.66:49,9,0	0/0:30,0:30:17.86:0,18,138	1/1:14,2:15:8.81:78,9,0	1/1:20,0:19:3:32,3,0	1/1:7,5:12:3:32,3,0	1/1:18,2:21:23.73:222,24,0	1/1:12,3:15:6.02:64,6,0	1/1:14,5:17:9.02:97,9,0	1/1:20,5:26:19.93:164,20,0	1/1:15,2:17:3.01:32,3,0	1/1:26,6:33:16.93:155,17,0	0/1:19,6:25:27.06:124,0,27	0/0:21,0:20:14.95:0,15,130	0/1:16,0:17:0:0,0,0	0/0:26,0:32:9:0,9,77	0/1:24,0:24:3.51:4,0,202	1/1:11,3:14:6.01:64,6,0	1/1:28,8:36:17.87:175,18,0	1/1:12,4:17:6.01:65,6,0	1/1:14,6:20:17.81:165,18,0	0/0:26,0:26:22.14:0,22,166	./.
chr10	31466182	.	GTT	G	4289.19	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=14.276;DP=650;FS=1.793;HRun=4;HaplotypeScore=89.7826;InbreedingCoeff=0.9997;MQ=89.52;MQ0=0;MQRankSum=-5.781;QD=37.96;ReadPosRankSum=1.496;VQSLOD=4.2695;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,132,2418	0/0:12,0:12:33.11:0,33,596	0/0:24,0:24:63.21:0,63,1110	0/0:29,0:29:71.52:0,72,1390	0/0:24,0:24:69.22:0,69,1255	0/0:25,0:25:75.15:0,75,1294	0/0:24,0:24:72.25:0,72,1344	1/1:1,22:23:69.23:1006,69,0	0/0:34,0:34:99:0,99,1837	0/0:23,0:23:63.22:0,63,1168	0/0:17,0:17:51.17:0,51,948	0/0:24,0:24:72.25:0,72,1324	0/0:29,0:29:84.29:0,84,1573	0/0:31,0:31:90.31:0,90,1654	0/0:26,0:26:78.27:0,78,1455	0/0:28,0:28:84.29:0,84,1569	0/0:22,0:22:66.23:0,66,1236	0/0:13,0:13:39.11:0,39,680	1/1:2,11:13:33.10:467,33,0	1/1:0,22:22:57.19:839,57,0	1/1:2,28:30:63.10:919,63,0	0/0:28,0:28:78.27:0,78,1442	0/0:16,0:16:45.15:0,45,833	0/0:18,0:18:54.19:0,54,1006	0/0:15,0:15:45.15:0,45,838	0/0:21,0:21:63.22:0,63,1162	1/1:0,25:25:72.24:1058,72,0	0/0:10,0:10:30.10:0,30,557
chr10	31466291	.	AAATGAGTGAATG	A	4621.06	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=12.485;DP=678;FS=1.045;HRun=0;HaplotypeScore=222.1133;InbreedingCoeff=0.9954;MQ=70.73;MQ0=0;MQRankSum=-5.880;QD=41.63;ReadPosRankSum=-1.669;VQSLOD=4.3231;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:39:99:0,114,5459	0/0:12,0:12:33.10:0,33,1823	0/0:20,0:20:48.65:0,49,739	0/0:11,0:11:24.05:0,24,891	0/0:21,0:21:63.13:0,63,2780	0/0:23,0:23:66.21:0,66,3576	0/0:25,0:25:69.11:0,69,3115	1/1:4,17:21:50.91:778,51,0	0/0:29,0:29:81.18:0,81,3776	0/0:20,0:20:57.17:0,57,2714	0/0:13,0:13:36.09:0,36,1876	0/0:30,0:30:90.22:0,90,4111	0/0:37,0:37:99:0,108,5449	0/0:35,0:35:99:0,99,4541	0/0:24,0:24:63.19:0,63,3168	0/0:36,0:36:99:0,99,4444	0/0:33,0:33:96.23:0,96,4664	0/0:16,0:16:39.11:0,39,2180	1/1:3,10:13:27.05:516,27,0	1/1:5,16:21:38.91:974,39,0	1/1:3,17:20:15.01:357,15,0	0/0:26,0:26:75.19:0,75,3408	0/0:26,0:26:75.23:0,75,4050	0/0:23,0:23:69.17:0,69,3346	0/0:19,0:19:57.11:0,57,2256	0/0:31,0:31:93.28:0,93,4484	1/1:4,32:36:57.20:1995,57,0	0/0:17,0:17:42.09:0,42,2178
chr10	31467459	.	TCTTC	T	4495.05	PASS	AB=0.830;AC=41;AF=0.820;AN=50;BaseQRankSum=1.997;DP=686;FS=13.036;HRun=0;HaplotypeScore=123.1055;InbreedingCoeff=0.6694;MQ=64.94;MQ0=6;MQRankSum=-0.304;QD=9.08;ReadPosRankSum=0.299;VQSLOD=3.1754;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:37:11.99:103,12,0	1/1:7,3:11:5.61:90,6,0	./.	./.	1/1:11,0:21:19.36:164,19,0	1/1:9,14:23:33.11:500,33,0	1/1:17,3:20:9.03:136,9,0	./.	1/1:18,8:27:15.04:209,15,0	1/1:22,9:31:30.10:451,30,0	1/1:10,6:16:15.05:227,15,0	1/1:17,4:21:12.04:182,12,0	1/1:9,12:21:30.10:454,30,0	1/1:12,5:17:9.03:136,9,0	0/0:23,0:31:27.09:0,27,452	1/1:22,7:29:12.04:182,12,0	0/1:31,8:39:18.67:294,0,19	1/1:27,0:30:3:28,3,0	1/1:27,5:29:15.05:223,15,0	1/1:12,2:14:6.02:91,6,0	0/0:40,0:40:30.09:0,30,617	0/0:23,0:23:12.04:0,12,278	1/1:10,5:15:12.04:182,12,0	1/1:21,8:29:21.07:318,21,0	0/0:32,0:32:26.76:0,27,611	1/1:18,6:24:12.04:178,12,0	1/1:14,11:25:21.06:301,21,0	1/1:11,2:13:3.01:45,3,0
chr10	31469009	.	GT	G	2281.01	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=11.267;DP=588;FS=3.603;HRun=10;HaplotypeScore=57.6163;InbreedingCoeff=0.9659;MQ=71.97;MQ0=0;MQRankSum=0.285;QD=17.15;ReadPosRankSum=-1.261;VQSLOD=3.7752;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:39.54:0,40,414	0/0:10,0:10:27.07:0,27,299	0/0:14,0:13:24.03:0,24,253	0/0:11,0:11:4.93:0,5,143	0/0:18,0:18:42.11:0,42,465	0/0:34,0:34:87.23:0,87,955	0/0:19,0:19:57.13:0,57,621	1/1:11,21:32:62.92:543,63,0	0/0:33,0:33:78.19:0,78,847	0/0:24,0:25:65.79:0,66,683	0/0:15,0:16:38.94:0,39,412	0/0:19,0:19:48.13:0,48,530	0/0:23,1:24:43.10:0,43,686	0/0:15,1:16:16.35:0,16,405	0/0:17,0:17:45.12:0,45,491	0/0:14,0:14:39.08:0,39,415	0/0:26,0:26:72.11:0,72,756	0/0:27,0:27:69.11:0,69,725	1/1:7,20:27:29.80:487,30,0	1/1:5,18:23:44.95:391,45,0	1/1:0,20:20:56.99:495,57,0	0/0:22,0:22:51.13:0,51,560	0/0:15,0:15:39.11:0,39,430	0/0:16,1:17:19.01:0,19,409	0/0:15,0:15:33.09:0,33,365	0/0:30,0:30:78.18:0,78,841	1/1:6,25:30:35.92:540,36,0	0/0:16,0:16:48.10:0,48,513
chr10	31471403	.	TA	T	3767.35	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=14.047;DP=649;FS=1.633;HRun=7;HaplotypeScore=63.8307;InbreedingCoeff=0.9479;MQ=74.09;MQ0=0;MQRankSum=-2.189;QD=24.95;ReadPosRankSum=-1.793;VQSLOD=3.5179;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:51.16:0,51,642	0/0:12,0:12:30.10:0,30,377	0/0:13,0:13:35.95:0,36,371	0/0:10,0:10:1.04:0,1,273	0/0:32,0:32:93.30:0,93,1170	0/0:22,0:22:57.16:0,57,694	0/0:13,0:13:33.10:0,33,404	1/1:6,30:36:90.16:909,90,0	0/0:20,0:20:57.18:0,57,717	0/0:37,0:37:99:0,111,1386	0/0:36,0:36:99:0,99,1233	0/0:21,0:21:60.19:0,60,755	0/0:20,0:20:60.19:0,60,755	0/0:18,0:18:51.16:0,51,641	0/0:22,0:22:60.19:0,60,755	0/0:26,0:26:66.20:0,66,817	0/0:22,0:22:63.19:0,63,780	0/0:22,0:22:57.18:0,57,715	1/1:4,17:21:38.09:504,38,0	1/1:3,34:37:99:1010,99,0	1/1:0,21:21:48.11:490,48,0	0/0:21,0:21:60.15:0,60,737	0/0:23,0:23:69.22:0,69,867	0/0:24,0:24:66.17:0,66,812	0/0:21,0:21:60.12:0,60,735	0/0:29,0:29:78.25:0,78,981	1/1:5,31:36:84.19:855,84,0	0/0:16,0:16:48.15:0,48,604
chr10	31471573	.	AAG	A	166.80	PASS	AB=0.832;AC=3;AF=0.054;AN=56;BaseQRankSum=6.783;DP=733;FS=7.069;HRun=0;HaplotypeScore=126.0101;InbreedingCoeff=-0.0566;MQ=80.50;MQ0=0;MQRankSum=-5.768;QD=1.57;ReadPosRankSum=-2.852;VQSLOD=1.2997;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,114,2314	0/0:16,0:16:48.16:0,48,950	0/0:40,0:37:99:0,105,1968	0/0:42,0:40:82.21:0,82,2144	0/0:18,0:18:54.19:0,54,1093	0/0:32,0:32:96.33:0,96,1930	0/0:26,0:26:78.27:0,78,1585	0/1:41,5:46:46.11:46,0,2155	0/0:34,0:34:99:0,102,2025	0/0:28,0:28:81.26:0,81,1581	0/0:28,0:28:84.27:0,84,1642	0/0:22,0:22:66.23:0,66,1324	0/0:29,0:29:87.30:0,87,1727	0/0:18,0:18:54.19:0,54,1097	0/0:24,0:24:72.25:0,72,1463	0/0:21,0:21:63.19:0,63,1197	0/0:11,0:11:33.11:0,33,655	0/0:27,0:27:72.15:0,72,1366	0/1:26,3:29:56.88:57,0,1417	0/0:23,10:33:61.40:0,61,1150	0/0:18,2:20:50.89:0,51,743	0/0:13,0:13:39.13:0,39,782	0/0:26,0:26:78.25:0,78,1549	0/0:14,0:14:39.09:0,39,740	0/0:22,0:21:63.22:0,63,1269	0/0:31,0:31:90.31:0,90,1808	0/1:17,14:31:99:164,0,938	0/0:11,0:11:33.11:0,33,671
chr10	31471583	.	A	ACACT	1208.52	PASS	AB=0.812;AC=4;AF=0.071;AN=56;BaseQRankSum=9.907;DP=748;FS=8.904;HRun=0;HaplotypeScore=163.4167;InbreedingCoeff=-0.0770;MQ=73.22;MQ0=0;MQRankSum=-9.097;QD=8.57;ReadPosRankSum=-5.543;VQSLOD=0.2418;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,120,2358	0/0:17,0:17:51.18:0,51,1067	0/0:39,0:34:99:0,99,1902	0/0:48,0:44:99:0,104,1879	0/0:18,0:18:51.17:0,51,1056	0/0:31,0:31:90.26:0,90,1806	0/0:28,0:28:81.26:0,81,1629	0/1:43,7:50:99:451,0,1935	0/0:34,0:34:99:0,99,2016	0/0:28,0:28:81.26:0,81,1600	0/0:26,0:26:78.23:0,78,1529	0/0:27,0:27:81.25:0,81,1605	0/0:25,0:25:75.26:0,75,1557	0/0:22,0:22:63.17:0,63,1226	0/0:27,0:27:81.28:0,81,1654	0/0:24,0:24:66.21:0,66,1294	0/0:14,0:14:39.05:0,39,731	0/0:22,0:22:66.23:0,66,1374	0/1:25,2:27:99:163,0,1057	0/1:21,11:32:68.70:69,0,963	0/0:15,3:18:23.99:0,24,502	0/0:12,0:12:36.11:0,36,703	0/0:26,0:26:75.23:0,75,1494	0/0:15,0:15:39.13:0,39,785	0/0:21,0:20:60.16:0,60,1115	0/0:31,0:31:93.29:0,93,1834	0/1:18,14:32:99:636,0,827	0/0:11,0:11:33.11:0,33,684
chr10	31471602	.	C	CACACAGAT	7697.67	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=10.564;DP=780;FS=2.005;HRun=0;HaplotypeScore=226.1388;InbreedingCoeff=0.9987;MQ=62.52;MQ0=0;MQRankSum=-15.282;QD=42.76;ReadPosRankSum=-2.353;VQSLOD=4.4263;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,120,2882	0/0:20,0:20:57.18:0,57,1335	0/0:43,0:36:81.10:0,81,1406	0/0:50,0:43:95.44:0,95,1709	0/0:17,0:17:48.13:0,48,1210	0/0:31,0:31:87.25:0,87,2084	0/0:23,0:23:66.21:0,66,1667	1/1:62,0:62:99:2838,162,0	0/0:33,0:33:96.28:0,96,2369	0/0:31,0:31:84.25:0,84,1795	0/0:25,0:25:69.20:0,69,1705	0/0:32,0:32:90.21:0,90,2053	0/0:24,0:24:69.11:0,69,1565	0/0:25,0:25:72.14:0,72,1574	0/0:31,0:31:93.17:0,93,2149	0/0:22,0:22:66.18:0,66,1685	0/0:14,0:14:36.10:0,36,920	0/0:24,0:24:63.60:0,64,1363	1/1:8,19:31:78.02:1632,78,0	1/1:36,0:36:63.40:1468,63,0	1/1:18,0:18:20.92:316,21,0	0/0:15,0:15:42.07:0,42,839	0/0:27,0:27:78.14:0,78,1629	0/0:14,0:14:32.85:0,33,695	0/0:21,0:20:57.17:0,57,1418	0/0:27,0:27:78.23:0,78,1814	1/1:33,0:33:78.16:1443,78,0	0/0:10,0:10:27.07:0,27,643
chr10	31472670	.	AGAGG	A	4911.39	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=14.720;DP=683;FS=1.887;HRun=0;HaplotypeScore=136.8985;InbreedingCoeff=0.9939;MQ=91.53;MQ0=0;MQRankSum=-14.322;QD=45.06;ReadPosRankSum=-3.404;VQSLOD=4.6441;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,117,3136	0/0:6,0:6:15.05:0,15,410	0/0:38,0:36:94.10:0,94,2674	0/0:38,0:37:92.85:0,93,2322	0/0:22,0:22:63.21:0,63,1651	0/0:15,0:15:45.15:0,45,1227	0/0:22,0:22:63.22:0,63,1725	1/1:5,20:25:66.16:1202,66,0	0/0:25,0:25:69.24:0,69,1890	0/0:30,0:30:87.30:0,87,2378	0/0:14,0:14:42.09:0,42,1030	0/0:32,0:32:90.28:0,90,2253	0/0:25,0:25:75.26:0,75,1993	0/0:33,0:33:93.32:0,93,2539	0/0:34,0:34:99:0,102,2794	0/0:22,0:22:66.21:0,66,1750	0/0:26,0:26:63.20:0,63,1632	0/0:11,0:11:27.09:0,27,739	1/1:4,9:13:30.09:533,30,0	1/1:6,15:21:45.15:838,45,0	1/1:8,9:16:27.09:492,27,0	0/0:26,0:26:78.25:0,78,2040	0/0:27,0:27:72.24:0,72,1868	0/0:31,0:31:87.28:0,87,2320	0/0:21,0:21:63.22:0,63,1664	0/0:29,0:29:84.29:0,84,2245	1/1:2,31:33:96.33:1846,96,0	0/0:6,0:6:18.06:0,18,493
chr10	31472689	.	CAG	C	2511.06	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=13.408;DP=685;FS=4.096;HRun=0;HaplotypeScore=119.3294;InbreedingCoeff=0.9825;MQ=79.35;MQ0=1;MQRankSum=-10.401;QD=23.04;ReadPosRankSum=-2.155;VQSLOD=3.9223;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,111,1834	0/0:5,0:5:12.04:0,12,198	0/0:42,1:36:37.52:0,38,1009	0/0:38,0:32:40.82:0,41,777	0/0:21,0:21:42.14:0,42,703	0/0:15,0:15:45.15:0,45,757	0/0:28,0:28:78.27:0,78,1305	1/1:7,23:30:50.24:864,50,0	0/0:23,0:23:66.21:0,66,1085	0/0:31,0:31:78.26:0,78,1284	0/0:11,0:11:30.10:0,30,504	0/0:32,0:32:78.27:0,78,1322	0/0:25,0:25:69.24:0,69,1155	0/0:32,0:32:81.26:0,81,1343	0/0:31,1:32:57.27:0,57,1467	0/0:26,0:26:66.19:0,66,1060	0/0:23,0:23:54.18:0,54,891	0/0:13,0:13:24.33:0,24,397	1/1:5,8:13:24.01:291,24,0	1/1:2,16:18:33.04:407,33,0	1/1:6,11:16:11.91:156,12,0	0/0:30,0:30:78.25:0,78,1300	0/0:22,0:22:63.22:0,63,1066	0/0:32,0:32:87.28:0,87,1431	0/0:20,0:20:56.92:0,57,942	0/0:28,0:28:63.20:0,63,1021	1/1:4,27:31:75.24:966,75,0	0/0:6,0:6:18.06:0,18,305
chr10	31473104	.	AAGAGCGAGAGAGAGAG	A	791.49	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=4.214;DP=436;FS=33.224;HRun=0;HaplotypeScore=119.3229;InbreedingCoeff=0.4256;MQ=40.03;MQ0=50;MQRankSum=-3.100;QD=10.28;ReadPosRankSum=-1.468;VQSLOD=0.4375;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:30:33.77:0,34,1480	1/1:2,0:2:0.94:2,1,0	0/0:39,0:2:5.90:0,6,38	0/0:47,0:4:11.50:0,11,67	0/0:9,0:7:5.93:0,6,160	0/1:14,0:13:6.02:6,0,885	0/0:20,0:19:9.79:0,10,912	1/1:11,0:10:29.83:290,30,0	0/0:14,0:14:18.01:0,18,627	0/0:16,0:16:36.14:0,36,1750	0/0:11,0:10:7.82:0,8,420	0/0:8,0:8:6.98:0,7,348	0/0:14,0:13:6.58:0,7,168	0/0:14,0:13:5.80:0,6,258	0/0:7,0:7:2.93:0,3,149	0/0:12,0:12:4.49:0,4,172	0/0:26,0:22:22.81:0,23,1190	0/0:11,0:9:12.01:0,12,260	1/1:5,0:4:8.98:164,9,0	1/1:7,1:8:4.68:24,5,0	0/1:14,0:8:8.52:9,0,11	0/1:13,0:11:13.84:14,0,201	0/0:8,0:7:5.98:0,6,236	0/0:30,0:27:14.97:0,15,585	0/0:11,0:11:1.17:0,1,717	0/0:22,0:19:40.58:0,41,988	1/1:5,3:6:11.82:434,12,0	0/0:6,0:5:8.77:0,9,384
chr10	31473107	.	AGC	A	539.88	PASS	AB=0.975;AC=24;AF=0.429;AN=56;BaseQRankSum=4.083;DP=433;FS=2.281;HRun=0;HaplotypeScore=75.0967;InbreedingCoeff=-0.0690;MQ=40.63;MQ0=47;MQRankSum=-2.753;QD=2.19;ReadPosRankSum=-1.981;VQSLOD=1.4961;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:34,0:30:12.94:13,0,108	1/1:3,0:3:3:25,3,0	0/0:39,0:2:5.90:0,6,38	0/0:47,0:4:11.30:0,11,56	0/0:9,0:7:5.73:0,6,61	0/1:15,0:14:40.51:41,0,143	0/1:21,0:20:53.55:54,0,100	1/1:11,0:10:29.76:211,30,0	0/1:8,6:14:21.30:21,0,91	0/1:17,0:17:3.75:4,0,326	0/0:9,0:9:8.95:0,9,102	0/1:10,0:10:23.84:58,0,24	0/1:13,0:12:22.35:22,0,43	0/0:13,0:12:0.55:0,1,13	1/1:6,0:6:0.47:1,0,0	0/1:10,0:10:3.46:6,0,3	0/1:27,0:23:30.36:30,0,125	0/1:13,0:11:33.94:34,0,44	1/1:6,0:4:8.95:66,9,0	1/1:8,0:8:1:3,1,0	0/0:14,0:8:0.44:0,0,13	0/1:13,0:10:13.75:14,0,51	0/0:8,0:7:5.88:0,6,77	0/0:30,0:28:14.97:0,15,169	0/0:11,0:11:0.46:0,0,142	0/1:20,0:17:11.20:11,0,189	1/1:6,0:5:11.84:81,12,0	0/0:6,0:5:8.76:0,9,88
chr10	31473109	.	C	CGA	870.90	PASS	AB=0.861;AC=27;AF=0.540;AN=50;BaseQRankSum=-1.035;DP=444;FS=3.676;HRun=0;HaplotypeScore=80.7563;InbreedingCoeff=0.0159;MQ=40.62;MQ0=46;MQRankSum=1.884;QD=2.94;ReadPosRankSum=-1.425;VQSLOD=1.8735;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:36,0:32:8.94:152,9,0	1/1:3,0:3:2.43:24,2,0	./.	./.	0/1:5,5:8:0:0,0,0	0/1:13,1:14:55.78:62,0,56	0/1:20,0:20:87.91:104,0,88	./.	0/1:13,1:14:29.75:30,0,86	0/1:9,6:17:99:125,0,116	0/1:8,2:10:27.41:38,0,27	1/1:11,0:11:8.62:97,9,0	1/1:14,1:14:2.61:24,3,0	0/1:8,6:13:18.56:38,0,19	1/1:7,0:7:0.47:1,0,0	1/1:5,4:9:2.83:44,3,0	0/1:22,1:24:60.80:87,0,61	1/1:12,1:11:9.44:72,9,0	0/0:6,0:4:2.84:0,3,14	0/1:8,0:8:0:0,0,0	0/1:14,0:8:0.01:0,0,0	0/0:14,0:11:3.01:0,3,33	0/0:7,0:6:3.01:0,3,33	0/1:20,12:30:36.13:36,0,44	0/0:9,3:12:8.89:0,9,96	1/1:17,4:18:8.72:77,9,0	0/0:6,0:5:8.42:0,8,42	0/0:6,1:6:6.01:0,6,65
chr10	31473233	.	CA	C	1946.76	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=9.463;DP=498;FS=3.143;HRun=1;HaplotypeScore=56.8635;InbreedingCoeff=0.9676;MQ=64.42;MQ0=5;MQRankSum=-7.709;QD=27.81;ReadPosRankSum=-3.304;VQSLOD=2.5755;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,123,1862	0/0:6,0:6:18.03:0,18,234	0/0:24,0:19:44.44:0,44,592	0/0:20,0:11:30.01:0,30,384	0/0:25,0:25:72.18:0,72,1042	0/0:18,0:18:48.08:0,48,704	0/0:13,0:13:39.04:0,39,531	1/1:0,17:17:48.05:577,48,0	0/0:9,0:9:27.06:0,27,381	0/0:25,0:25:75.22:0,75,1132	0/0:17,0:17:51.17:0,51,808	0/0:11,0:11:30:0,30,420	0/0:14,0:14:42.14:0,42,664	0/0:11,0:11:30.09:0,30,451	0/0:9,0:9:27.05:0,27,379	0/0:10,0:10:27.09:0,27,429	0/0:38,0:38:99:0,108,1658	0/0:20,0:20:60.15:0,60,880	1/1:7,11:17:42.08:515,42,0	1/1:9,15:24:65.96:758,66,0	1/1:3,0:3:5.95:59,6,0	0/0:16,0:16:48.15:0,48,739	0/0:15,0:15:45.13:0,45,690	0/0:22,0:22:66.21:0,66,1023	0/0:23,0:23:66.20:0,66,1002	0/0:29,0:29:84.16:0,84,1215	1/1:0,8:7:14.77:207,15,0	0/0:9,0:9:27:0,27,352
chr10	31473346	.	TTTGTAAATGGAA	T	4537.47	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=10.430;DP=395;FS=11.069;HRun=0;HaplotypeScore=134.8999;InbreedingCoeff=0.9020;MQ=66.58;MQ0=0;MQRankSum=-9.243;QD=79.60;ReadPosRankSum=0.354;VQSLOD=4.3993;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,111,6516	0/0:4,0:4:9.03:0,9,532	0/0:12,0:12:36.12:0,36,1781	0/0:19,0:14:42.14:0,42,1925	0/0:13,0:13:39.13:0,39,2211	0/0:11,0:11:30.10:0,30,1869	0/0:22,0:22:66.20:0,66,3471	1/1:5,15:19:42.14:1519,42,0	0/0:9,0:9:27.09:0,27,1667	0/0:15,0:15:45.15:0,45,2379	0/0:11,0:11:33.11:0,33,2039	0/0:21,0:21:63.22:0,63,3653	0/0:11,0:11:33.11:0,33,1872	0/0:18,0:18:54.18:0,54,3177	0/0:16,0:16:48.16:0,48,2748	0/0:8,0:8:24.08:0,24,1360	0/0:24,0:24:66.23:0,66,3580	0/0:17,0:17:48.12:0,48,2401	1/1:1,19:20:51.11:1539,51,0	1/1:1,11:12:30.10:1138,30,0	1/1:1,1:2:3.01:114,3,0	0/0:6,0:6:18.06:0,18,1088	0/0:8,0:8:24.08:0,24,1314	0/0:18,0:18:54.19:0,54,2927	0/0:16,0:16:45.15:0,45,2769	0/0:16,0:16:48.16:0,48,2799	1/1:0,3:3:5.95:227,6,0	0/0:4,0:4:9.03:0,9,513
chr10	31474206	.	AT	A	2287.91	PASS	AB=0.882;AC=11;AF=0.196;AN=56;BaseQRankSum=12.861;DP=618;FS=15.784;HRun=10;HaplotypeScore=72.8182;InbreedingCoeff=0.8727;MQ=76.22;MQ0=0;MQRankSum=0.056;QD=16.82;ReadPosRankSum=-0.892;VQSLOD=2.4864;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:57.13:0,57,614	0/0:8,0:8:21.06:0,21,232	0/0:20,0:20:17.80:0,18,239	0/0:10,0:8:10.15:0,10,83	0/0:24,0:24:69.17:0,69,755	0/0:29,0:29:75.19:0,75,822	0/0:15,0:15:33.09:0,33,365	1/1:7,26:33:77.88:658,78,0	0/0:27,0:27:81.19:0,81,880	0/0:19,0:19:51.14:0,51,564	0/0:17,0:17:51.14:0,51,564	0/0:23,0:23:66.13:0,66,709	0/0:22,0:22:54.14:0,54,591	0/0:21,0:21:48.13:0,48,531	0/0:31,1:32:61.17:0,61,896	0/0:21,0:21:60.15:0,60,657	0/0:31,0:30:84.21:0,84,914	0/0:14,0:14:39.11:0,39,431	1/1:6,18:24:62.96:540,63,0	1/1:3,32:35:80.94:703,81,0	1/1:1,11:12:23.97:208,24,0	0/0:33,1:34:64.17:0,64,927	0/0:25,1:27:36.95:0,37,618	0/1:13,2:15:19:19,0,266	0/0:33,0:33:96.25:0,96,1054	0/0:25,1:26:43.12:0,43,697	1/1:4,13:17:38.99:338,39,0	0/0:8,0:8:15.04:0,15,166
chr10	31474262	.	TTA	T	5164.08	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=14.670;DP=669;FS=0.000;HRun=0;HaplotypeScore=84.6887;InbreedingCoeff=0.9999;MQ=81.78;MQ0=0;MQRankSum=-3.598;QD=40.66;ReadPosRankSum=-2.964;VQSLOD=5.0385;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:60.18:0,60,1124	0/0:14,0:14:42.14:0,42,799	0/0:25,0:25:72.24:0,72,1354	0/0:13,0:13:33.11:0,33,622	0/0:24,0:24:63.22:0,63,1216	0/0:30,0:30:90.30:0,90,1704	0/0:13,0:13:39.13:0,39,752	1/1:0,26:26:78.20:1122,78,0	0/0:34,0:34:99:0,102,1969	0/0:23,0:23:63.21:0,63,1185	0/0:21,0:21:63.22:0,63,1216	0/0:24,0:24:72.25:0,72,1390	0/0:21,0:21:60.21:0,60,1144	0/0:19,0:19:54.19:0,54,1042	0/0:31,0:31:93.32:0,93,1765	0/0:25,0:25:75.24:0,75,1404	0/0:33,0:33:96.33:0,96,1854	0/0:18,0:18:54.12:0,54,948	1/1:3,24:27:75.22:1105,75,0	1/1:3,32:35:99:1377,99,0	1/1:0,18:18:45.15:688,45,0	0/0:40,0:40:99:0,117,2260	0/0:24,0:24:69.24:0,69,1333	0/0:13,0:13:39.12:0,39,719	0/0:43,0:43:99:0,126,2390	0/0:16,0:16:48.16:0,48,922	1/1:0,21:21:57.19:872,57,0	0/0:18,0:18:51.17:0,51,959
chr10	31474663	.	C	CT	3933.32	PASS	AB=0.722;AC=35;AF=0.625;AN=56;BaseQRankSum=-3.818;DP=562;FS=0.451;HRun=14;HaplotypeScore=86.1880;InbreedingCoeff=0.1196;MQ=68.95;MQ0=9;MQRankSum=-1.729;QD=8.92;ReadPosRankSum=0.353;VQSLOD=2.9839;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,25:36:33.80:434,34,0	1/1:1,5:5:9:79,9,0	0/1:21,0:19:5.40:5,0,38	0/1:18,0:12:7.32:41,0,7	1/1:13,10:25:26.63:206,27,0	1/1:5,12:20:8.98:294,9,0	0/1:8,10:18:24.76:178,0,25	0/0:33,1:33:12.80:0,13,196	0/1:9,9:18:14.68:121,0,15	0/1:13,7:20:8.74:159,0,9	0/1:3,11:16:5.73:186,0,6	0/1:9,3:12:10.76:67,0,11	1/1:11,18:29:2.18:237,2,0	1/1:13,2:15:2.09:120,2,0	1/1:11,11:23:29.03:262,29,0	1/1:2,10:12:26.84:225,27,0	0/1:11,13:25:50.78:192,0,51	0/1:8,9:17:21.78:196,0,22	0/0:15,1:14:3.09:0,3,140	0/0:20,1:23:19.01:0,19,234	0/0:16,0:16:28.56:0,29,179	1/1:8,7:15:17.79:145,18,0	1/1:11,7:22:14.30:126,14,0	1/1:1,7:8:5.15:73,5,0	1/1:12,15:29:25.97:303,26,0	0/1:13,11:24:21.84:194,0,22	0/0:24,3:31:14.57:0,15,314	0/1:2,5:7:4.28:88,0,4
chr10	31475597	.	AC	A	4946.32	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=16.644;DP=688;FS=4.986;HRun=2;HaplotypeScore=93.0781;InbreedingCoeff=0.9999;MQ=82.85;MQ0=0;MQRankSum=-4.793;QD=33.65;ReadPosRankSum=-2.143;VQSLOD=4.0004;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,144,2158	0/0:14,0:14:42.14:0,42,627	0/0:16,0:16:41.82:0,42,539	0/0:24,0:24:60.19:0,60,862	0/0:21,0:21:54.18:0,54,809	0/0:19,0:19:57.19:0,57,848	0/0:26,0:26:75.25:0,75,1124	1/1:0,24:24:72.19:915,72,0	0/0:20,0:20:60.19:0,60,881	0/0:16,0:16:48.16:0,48,719	0/0:29,0:29:81.16:0,81,1193	0/0:26,0:26:72.24:0,72,1060	0/0:24,0:24:69.23:0,69,1030	0/0:26,0:26:78.26:0,78,1148	0/0:27,0:27:81.27:0,81,1196	0/0:15,0:15:45.15:0,45,674	0/0:24,0:24:69.20:0,69,974	0/0:36,0:36:99:0,105,1548	1/1:1,21:22:63.07:722,63,0	1/1:1,26:27:78.25:1013,78,0	1/1:1,48:49:99:1441,111,0	0/0:29,0:29:87.29:0,87,1301	0/0:23,0:23:69.23:0,69,1033	0/0:19,0:19:54.18:0,54,806	0/0:27,0:27:75.25:0,75,1105	0/0:21,0:21:63.21:0,63,944	1/1:3,22:25:66.21:857,66,0	0/0:10,0:10:30.10:0,30,444
chr10	31475699	.	G	GCGCAATCCTAAA	14751	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=1.351;DP=645;FS=2.324;HRun=0;HaplotypeScore=216.6988;InbreedingCoeff=0.9989;MQ=86.05;MQ0=0;MQRankSum=-14.747;QD=119.93;ReadPosRankSum=-4.143;VQSLOD=4.3071;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,165,5562	0/0:7,0:7:21.04:0,21,555	0/0:28,0:28:72.21:0,72,2219	0/0:24,0:24:60.20:0,60,1881	0/0:14,0:14:42.14:0,42,1373	0/0:26,0:25:72.25:0,72,2562	0/0:23,0:23:60.19:0,60,2119	1/1:26,3:32:87.28:3825,87,0	0/0:20,0:20:57.20:0,57,2064	0/0:20,0:20:60.19:0,60,1832	0/0:18,0:18:48.16:0,48,1738	0/0:19,0:19:57.20:0,57,2126	0/0:24,0:24:69.24:0,69,2480	0/0:36,0:36:93.32:0,93,3200	0/0:22,0:22:60.19:0,60,2056	0/0:12,0:12:30.09:0,30,970	0/0:26,0:26:75.26:0,75,2795	0/0:23,0:23:69.24:0,69,2514	1/1:15,4:21:57.20:2411,57,0	1/1:4,11:20:45.12:2459,45,0	1/1:19,5:25:45.14:2269,45,0	0/0:15,0:15:42.13:0,42,1390	0/0:21,0:21:63.21:0,63,2100	0/0:25,0:25:66.21:0,66,2247	0/0:23,0:23:69.22:0,69,2466	0/0:27,0:26:81.26:0,81,2917	1/1:14,8:25:72.25:3788,72,0	0/0:14,0:14:42.14:0,42,1567
chr10	31476934	.	T	TAA	2490.51	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-4.987;DP=545;FS=3.647;HRun=11;HaplotypeScore=73.8585;InbreedingCoeff=0.9721;MQ=75.39;MQ0=0;MQRankSum=0.769;QD=23.50;ReadPosRankSum=-5.126;VQSLOD=2.1733;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:19:29.91:0,30,340	0/0:10,0:10:24.03:0,24,232	0/0:8,0:8:5.97:0,6,58	0/0:16,0:16:20.13:0,20,154	0/0:30,0:33:78.21:0,78,739	0/0:18,0:18:41.95:0,42,400	0/0:23,0:23:51.04:0,51,495	1/1:9,14:25:53.50:610,54,0	0/0:19,0:20:44.69:0,45,403	0/0:18,0:19:50.80:0,51,472	0/0:14,0:17:38.73:0,39,361	0/0:16,0:16:45.05:0,45,430	0/0:26,0:26:56.54:0,57,514	0/0:20,0:20:42.47:0,42,402	0/0:16,0:17:33.26:0,33,379	0/0:24,0:26:71.57:0,72,664	0/0:20,0:20:57.08:0,57,553	0/0:16,0:18:47.55:0,48,431	1/1:2,9:13:33.10:443,33,0	1/1:5,22:29:68.57:862,69,0	1/1:6,8:15:21.44:271,21,0	0/0:19,0:19:45:0,45,430	0/0:19,0:19:39.86:0,40,381	0/0:18,0:19:41.92:0,42,447	0/0:23,0:24:56.73:0,57,535	0/0:23,0:23:47.84:0,48,515	1/1:4,18:24:33.58:479,34,0	0/0:9,0:9:20.97:0,21,203
chr10	31479586	.	GA	G	791.57	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=9.079;DP=451;FS=2.879;HRun=1;HaplotypeScore=62.6549;InbreedingCoeff=0.9689;MQ=89.41;MQ0=1;MQRankSum=-1.041;QD=11.31;ReadPosRankSum=-5.345;VQSLOD=-0.2008;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,101,1387	0/0:6,0:6:18.03:0,18,213	0/0:26,0:22:48.11:0,48,651	0/0:29,0:27:62.54:0,63,746	0/0:18,0:18:54.14:0,54,701	0/0:16,0:16:45.12:0,45,591	0/0:16,0:16:45.09:0,45,569	1/1:0,4:21:48.38:349,48,0	0/0:14,0:14:36.08:0,36,471	0/0:14,0:14:36.10:0,36,477	0/0:12,0:12:33.06:0,33,410	0/0:18,0:18:51.13:0,51,686	0/0:17,0:17:45.09:0,45,560	0/0:8,0:8:24.06:0,24,317	0/0:14,0:14:42.14:0,42,588	0/0:13,0:13:39.13:0,39,545	0/0:20,0:20:60.20:0,60,852	0/0:20,0:20:57.11:0,57,728	1/1:0,6:8:20.91:178,21,0	1/1:0,5:8:16.96:129,17,0	1/1:9,4:13:29.36:228,29,0	0/0:3,0:3:9.03:0,9,128	0/0:18,0:18:54.16:0,54,720	0/0:26,0:26:75.18:0,75,1036	0/0:12,0:12:36.10:0,36,471	0/0:15,0:15:42.12:0,42,565	1/1:2,17:20:10.19:78,10,0	0/0:8,0:8:21.07:0,21,297
chr10	31479588	.	GA	G	773.34	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=9.115;DP=450;FS=2.860;HRun=1;HaplotypeScore=64.0942;InbreedingCoeff=0.9659;MQ=90.89;MQ0=1;MQRankSum=-0.512;QD=10.74;ReadPosRankSum=-5.286;VQSLOD=-0.4129;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:95.37:0,95,1444	0/0:6,0:6:17.98:0,18,256	0/0:30,0:25:32.96:0,33,794	0/0:29,0:28:58.07:0,58,656	0/0:17,0:17:51.17:0,51,806	0/0:15,0:15:45.15:0,45,706	0/0:14,0:14:39.13:0,39,623	1/1:17,4:21:45.66:323,46,0	0/0:14,0:14:36.11:0,36,551	0/0:14,0:14:36.12:0,36,572	0/0:13,0:13:36.11:0,36,538	0/0:18,0:18:51.17:0,51,813	0/0:17,0:17:45.15:0,45,716	0/0:8,0:8:24.08:0,24,383	0/0:15,0:15:45.14:0,45,665	0/0:13,0:13:39.12:0,39,600	0/0:20,0:20:60.20:0,60,953	0/0:19,0:19:57.19:0,57,909	1/1:6,2:8:20.91:178,21,0	1/1:3,5:8:17.83:130,18,0	1/1:12,4:16:26.76:240,27,0	0/0:3,0:3:9.03:0,9,144	0/0:18,0:18:54.15:0,54,807	0/0:26,0:26:78.26:0,78,1222	0/0:12,0:12:36.11:0,36,550	0/0:15,0:15:42.14:0,42,661	1/1:14,5:19:8.94:73,9,0	0/0:8,0:8:21.07:0,21,335
chr10	31480513	.	AGTGAGTGTGTGAGT	A	3027.66	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=11.403;DP=702;FS=0.000;HRun=0;HaplotypeScore=246.1023;InbreedingCoeff=0.8711;MQ=58.43;MQ0=18;MQRankSum=-1.889;QD=25.66;ReadPosRankSum=-2.070;VQSLOD=2.3292;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:43:96.06:0,96,5066	0/0:11,0:11:33.08:0,33,1089	0/0:24,0:9:5.24:0,5,221	0/0:27,0:18:32.47:0,32,523	0/0:22,0:22:66.23:0,66,3513	0/0:24,0:23:63.22:0,63,2834	0/0:32,0:31:81.09:0,81,3221	1/1:5,27:29:1.31:1046,1,0	0/0:27,0:27:78.22:0,78,3647	0/0:19,0:18:54.19:0,54,2933	0/0:11,0:11:30.10:0,30,1682	0/0:31,0:31:81.60:0,82,3824	0/0:30,0:30:81.28:0,81,3751	0/0:24,0:23:66.20:0,66,3248	0/0:30,0:30:81.22:0,81,3614	0/0:29,0:29:78.24:0,78,3855	0/0:35,0:34:72.72:0,73,3208	0/0:23,0:23:66.20:0,66,3021	1/1:2,13:14:42.08:713,42,0	1/1:1,14:16:30.03:585,30,0	1/1:5,28:30:3.01:53,3,0	0/0:30,0:29:87.29:0,87,4924	0/0:23,0:23:66.23:0,66,3504	0/0:34,0:34:90.18:0,90,4042	0/0:19,0:19:51.15:0,51,2509	0/0:24,0:22:19.39:0,19,2991	1/1:1,19:22:20.05:787,20,0	0/0:10,0:10:26.86:0,27,911
chr10	31480525	.	AGT	A	389.81	PASS	AB=0.908;AC=14;AF=0.269;AN=52;BaseQRankSum=8.879;DP=730;FS=1.146;HRun=0;HaplotypeScore=107.8646;InbreedingCoeff=0.2008;MQ=56.15;MQ0=25;MQRankSum=-1.178;QD=1.64;ReadPosRankSum=-0.149;VQSLOD=1.9725;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:46,1:46:23.96:0,24,1164	0/0:12,0:12:27.09:0,27,412	0/0:20,0:5:4.15:0,4,19	./.	0/0:25,1:26:24.83:0,25,798	0/0:23,1:24:10.49:0,10,598	0/0:32,0:31:37.88:0,38,789	0/1:33,0:29:23.81:99,0,24	0/0:26,1:27:26.60:0,27,836	0/1:23,2:22:18.10:18,0,620	0/1:16,1:16:10.05:10,0,463	0/0:30,0:31:48.61:0,49,865	0/0:30,3:33:8.90:0,9,992	0/1:19,4:22:49.87:50,0,581	0/0:28,1:29:22.52:0,23,758	0/1:27,4:32:6.90:7,0,733	0/0:29,5:33:27.64:0,28,779	0/0:22,0:22:51.15:0,51,765	1/1:18,0:17:13.81:92,14,0	1/1:16,0:16:8.78:54,9,0	./.	0/0:31,1:33:57.52:0,58,1109	0/0:24,1:26:16.20:0,16,764	0/0:28,3:31:25.96:0,26,800	0/1:19,0:20:3.62:4,0,551	0/1:20,3:21:30.30:30,0,523	1/1:22,0:22:20.22:135,20,0	0/1:6,2:9:51.26:51,0,138
chr10	31481546	.	C	CAA	4544.29	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-11.878;DP=550;FS=11.505;HRun=9;HaplotypeScore=61.3495;InbreedingCoeff=0.9492;MQ=70.74;MQ0=0;MQRankSum=-0.031;QD=37.56;ReadPosRankSum=-2.409;VQSLOD=3.4712;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:51.10:0,51,543	0/0:10,0:10:30.08:0,30,319	0/0:12,0:12:20.58:0,21,190	0/0:9,0:10:1.73:0,2,113	0/0:29,0:29:78.19:0,78,830	0/0:26,0:26:69.15:0,69,734	0/0:15,0:15:36.08:0,36,383	1/1:6,22:29:69.22:1039,69,0	0/0:19,0:19:42.05:0,42,447	0/0:26,0:26:63.12:0,63,671	0/0:20,0:20:48.09:0,48,511	0/0:18,0:18:51.13:0,51,543	0/0:19,0:19:36.01:0,36,383	0/0:16,0:16:45.11:0,45,479	0/0:24,0:24:59.82:0,60,599	0/0:19,0:19:45.08:0,45,471	0/0:11,0:11:27.07:0,27,287	0/0:7,0:7:18.04:0,18,192	1/1:2,17:20:53.67:794,54,0	1/1:2,23:25:72.21:1067,72,0	1/1:2,11:14:36.12:537,36,0	0/0:22,0:22:63.12:0,63,656	0/0:23,0:24:48.02:0,48,550	0/0:10,0:10:30.08:0,30,319	0/0:16,0:16:42.08:0,42,447	0/0:36,0:36:87.17:0,87,914	1/1:6,26:33:72.24:1107,72,0	0/0:20,0:20:45.11:0,45,479
chr10	31482940	.	G	GA	5720.27	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=13.139;DP=690;FS=5.953;HRun=0;HaplotypeScore=81.4919;InbreedingCoeff=0.9994;MQ=85.88;MQ0=0;MQRankSum=-1.610;QD=44.34;ReadPosRankSum=-2.618;VQSLOD=3.9736;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:58:99:0,169,2344	0/0:10,0:10:30.10:0,30,419	0/0:26,0:26:72.24:0,72,997	0/0:17,0:18:45.14:0,45,600	0/0:18,0:18:54.18:0,54,754	0/0:26,0:26:78.26:0,78,1085	0/0:31,0:31:93.31:0,93,1299	1/1:3,24:27:78.22:1212,78,0	0/0:18,0:18:54.16:0,54,737	0/0:27,0:27:81.26:0,81,1107	0/0:15,0:15:45.15:0,45,629	0/0:21,0:21:63.21:0,63,879	0/0:26,0:26:78.24:0,78,1072	0/0:19,0:19:57.19:0,57,797	0/0:23,0:23:60.20:0,60,839	0/0:22,0:22:66.22:0,66,914	0/0:46,0:46:99:0,138,1910	0/0:25,0:25:75.16:0,75,1001	1/1:4,20:24:69.19:1033,69,0	1/1:0,21:21:60.20:958,60,0	1/1:4,21:25:63.20:984,63,0	0/0:16,0:16:48.16:0,48,670	0/0:25,0:25:75.22:0,75,1028	0/0:40,0:40:99:0,120,1610	0/0:17,0:17:51.17:0,51,713	0/0:26,0:26:78.26:0,78,1082	1/1:0,32:31:96.33:1533,96,0	0/0:8,0:8:24.08:0,24,334
chr10	31483030	.	T	TG	5073.95	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-7.860;DP=695;FS=2.636;HRun=2;HaplotypeScore=70.9406;InbreedingCoeff=0.9889;MQ=67.46;MQ0=0;MQRankSum=-2.193;QD=37.87;ReadPosRankSum=-2.644;VQSLOD=4.4465;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:60,0:60:99:0,162,1949	0/0:5,0:5:12.04:0,12,149	0/0:19,0:17:32.93:0,33,363	0/0:25,0:25:64.75:0,65,774	0/0:22,0:22:60.19:0,60,741	0/0:22,0:22:63.18:0,63,767	0/0:30,0:30:84.25:0,84,1028	1/1:5,24:29:72.23:1016,72,0	0/0:24,0:24:69.20:0,69,841	0/0:23,0:23:66.21:0,66,818	0/0:11,0:11:27.08:0,27,325	0/0:34,0:34:99:0,102,1240	0/0:30,0:30:90.26:0,90,1091	0/0:29,0:29:87.27:0,87,1078	0/0:22,0:22:66.21:0,66,818	0/0:24,0:24:66.18:0,66,793	0/0:36,0:36:99:0,108,1323	0/0:29,0:29:84.25:0,84,1028	1/1:8,18:26:66.21:926,66,0	1/1:0,14:14:42.14:605,42,0	1/1:1,36:37:99:1441,102,0	0/0:17,0:17:45.13:0,45,546	0/0:17,0:17:42.13:0,42,519	0/0:42,0:42:99:0,120,1476	0/0:17,0:17:51.14:0,51,619	0/0:18,0:18:48.12:0,48,570	1/1:4,24:28:78.25:1086,78,0	0/0:5,0:5:15.05:0,15,186
chr10	31483448	.	T	TATGCA	9897.60	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-5.420;DP=682;FS=7.564;HRun=0;HaplotypeScore=122.4429;InbreedingCoeff=0.9998;MQ=79.83;MQ0=0;MQRankSum=-10.035;QD=77.93;ReadPosRankSum=-2.324;VQSLOD=6.2823;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:90.29:0,90,1953	0/0:11,0:11:33.10:0,33,686	0/0:25,0:25:72.19:0,72,1423	0/0:17,0:17:51.13:0,51,984	0/0:40,0:40:99:0,111,2294	0/0:35,0:35:99:0,99,2180	0/0:24,0:24:69.21:0,69,1406	1/1:10,13:32:87.26:2240,87,0	0/0:30,0:30:84.29:0,84,1839	0/0:28,0:28:81.28:0,81,1803	0/0:24,0:24:69.24:0,69,1537	0/0:18,0:18:54.19:0,54,1186	0/0:24,0:24:69.22:0,69,1496	0/0:22,0:22:63.20:0,63,1362	0/0:29,0:29:87.30:0,87,1922	0/0:23,0:23:66.23:0,66,1406	0/0:21,0:21:57.20:0,57,1236	0/0:19,0:19:54.19:0,54,1204	1/1:4,17:23:63.22:1888,63,0	1/1:5,16:23:60.16:1843,60,0	1/1:4,13:19:39.13:1255,39,0	0/0:24,0:24:72.25:0,72,1544	0/0:24,0:24:72.25:0,72,1582	0/0:23,0:23:69.22:0,69,1473	0/0:22,0:22:60.20:0,60,1336	0/0:31,0:31:93.31:0,93,2021	1/1:3,23:30:84.29:2671,84,0	0/0:10,0:10:30.10:0,30,659
chr10	31486056	.	T	TA	159.66	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=5.347;DP=445;FS=1.232;HRun=7;HaplotypeScore=62.0027;InbreedingCoeff=0.5209;MQ=68.49;MQ0=0;MQRankSum=1.491;QD=9.39;ReadPosRankSum=-1.049;VQSLOD=1.0051;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:66.07:0,66,629	0/0:9,0:9:27.04:0,27,261	0/1:10,0:8:45.39:45,0,68	0/0:7,0:7:0.27:0,0,25	0/0:31,0:31:75.06:0,75,710	0/0:25,0:25:69.09:0,69,661	0/0:16,0:16:48.05:0,48,450	0/0:24,0:24:63.08:0,63,604	1/1:0,7:7:18.06:217,18,0	0/0:20,0:20:54.08:0,54,518	0/0:12,0:12:36.05:0,36,343	0/0:9,0:9:24.04:0,24,232	0/0:15,0:15:42.05:0,42,400	0/0:11,0:11:33.05:0,33,319	0/0:12,0:12:30.04:0,30,286	0/0:14,1:15:24.11:0,24,350	0/0:32,0:32:90.10:0,90,851	0/0:14,0:14:36.05:0,36,342	0/0:16,0:16:42.03:0,42,397	0/0:25,0:25:63.05:0,63,598	0/0:4,0:4:12.01:0,12,111	0/0:11,0:11:30.04:0,30,284	0/0:12,0:12:36.05:0,36,343	0/0:7,0:7:15.01:0,15,141	0/0:23,0:23:63.10:0,63,608	0/0:25,0:25:69.10:0,69,663	0/0:18,0:18:39.05:0,39,376	0/0:10,0:10:27.03:0,27,255
chr10	31487378	.	AC	A	1247.50	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=8.959;DP=773;FS=9.887;HRun=2;HaplotypeScore=75.7640;InbreedingCoeff=0.9989;MQ=82.21;MQ0=0;MQRankSum=0.537;QD=35.64;ReadPosRankSum=3.512;VQSLOD=3.8664;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,135,2104	0/0:13,0:13:39.13:0,39,623	0/0:18,0:18:51.04:0,51,758	0/0:26,0:26:67.73:0,68,981	0/0:23,0:23:69.22:0,69,1078	0/0:15,0:15:45.13:0,45,670	0/0:29,0:29:87.24:0,87,1317	0/0:35,0:35:99:0,105,1678	1/1:0,35:35:96.32:1342,96,0	0/0:39,0:38:99:0,114,1799	0/0:24,0:24:72.21:0,72,1098	0/0:35,0:35:99:0,105,1653	0/0:22,0:22:66.22:0,66,1051	0/0:38,0:38:99:0,111,1769	0/0:39,0:39:99:0,117,1844	0/0:30,0:30:90.28:0,90,1392	0/0:29,0:29:84.29:0,84,1342	0/0:16,0:16:48.16:0,48,767	0/0:17,0:17:48.60:0,49,716	0/0:28,0:28:81.28:0,81,1294	0/0:40,0:40:99:0,117,1843	0/0:28,0:28:84.23:0,84,1268	0/0:15,0:15:45.13:0,45,694	0/0:26,0:26:78.22:0,78,1219	0/0:25,0:24:75.26:0,75,1193	0/0:36,0:36:99:0,105,1621	0/0:38,0:38:99:0,114,1768	0/0:9,0:9:27.05:0,27,381
chr10	31487682	.	GGGGCAGT	G	996.98	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.758;DP=749;FS=0.905;HRun=0;HaplotypeScore=169.1430;InbreedingCoeff=0.9988;MQ=82.08;MQ0=0;MQRankSum=-4.798;QD=41.54;ReadPosRankSum=0.501;VQSLOD=3.1098;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,138,4984	0/0:12,0:12:36.12:0,36,1354	0/0:23,0:23:32.43:0,32,1584	0/0:22,0:21:28.57:0,29,1000	0/0:23,0:23:66.23:0,66,2459	0/0:22,0:22:54.19:0,54,2012	0/0:30,0:30:84.27:0,84,3099	0/0:37,0:37:99:0,99,3443	1/1:5,19:24:45.15:1092,45,0	0/0:30,0:30:87.30:0,87,3293	0/0:19,0:19:54.14:0,54,1941	0/0:22,0:22:54.19:0,54,2054	0/0:33,0:33:87.28:0,87,3226	0/0:27,0:27:69.24:0,69,2572	0/0:28,0:28:63.22:0,63,2365	0/0:25,0:25:63.20:0,63,2318	0/0:33,0:33:90.31:0,90,3429	0/0:20,0:20:48.16:0,48,1764	0/0:23,0:23:54.19:0,54,1859	0/0:26,0:26:57.20:0,57,2067	0/0:34,0:34:93.32:0,93,3465	0/0:17,0:17:48.16:0,48,1831	0/0:19,0:19:45.15:0,45,1630	0/0:37,0:37:96.33:0,96,3610	0/0:28,0:28:72.25:0,72,2711	0/0:29,0:29:78.27:0,78,2938	0/0:27,0:27:75.26:0,75,2865	0/0:25,0:25:72.25:0,72,2744
chr10	31489281	.	AG	A	13583.34	PASS	AB=0.813;AC=55;AF=0.982;AN=56;BaseQRankSum=1.583;DP=454;FS=2.536;HRun=3;HaplotypeScore=229.6858;InbreedingCoeff=-0.0233;MQ=66.40;MQ0=0;MQRankSum=-2.786;QD=29.92;ReadPosRankSum=2.011;VQSLOD=3.9474;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,21:22:51.12:613,51,0	1/1:0,9:9:27.08:334,27,0	1/1:5,9:14:23.77:321,24,0	0/1:10,3:13:26.97:278,0,27	1/1:0,13:13:31.91:376,32,0	1/1:0,17:17:48.15:594,48,0	1/1:0,14:13:39.12:482,39,0	1/1:2,22:24:66.21:817,66,0	1/1:2,11:12:30.09:369,30,0	1/1:2,27:29:81.25:1001,81,0	1/1:1,16:17:39.06:463,39,0	1/1:1,15:16:42.08:502,42,0	1/1:0,11:11:27.04:316,27,0	1/1:0,24:24:63.19:779,63,0	1/1:1,16:16:45.10:539,45,0	1/1:1,17:17:45.14:557,45,0	1/1:2,4:5:6.02:74,6,0	1/1:1,9:10:18.06:223,18,0	1/1:3,8:11:30.09:361,30,0	1/1:2,20:22:60.19:737,60,0	1/1:2,7:9:15.05:186,15,0	1/1:0,27:27:62.01:747,62,0	1/1:0,15:15:27.08:334,27,0	1/1:1,9:10:18:204,18,0	1/1:2,21:23:57.14:688,57,0	1/1:0,20:20:60.19:741,60,0	1/1:0,16:16:42.13:520,42,0	1/1:0,12:12:36.07:426,36,0
chr10	31489406	.	CGTGT	C	2746.55	PASS	AB=0.776;AC=34;AF=0.739;AN=46;BaseQRankSum=-1.046;DP=461;FS=0.000;HRun=0;HaplotypeScore=122.6875;InbreedingCoeff=0.3358;MQ=55.55;MQ0=15;MQRankSum=-1.655;QD=8.72;ReadPosRankSum=-0.159;VQSLOD=2.6803;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:11,5:17:0:0,0,0	./.	./.	./.	1/1:6,9:15:8.76:140,9,0	1/1:10,5:16:9.03:127,9,0	1/1:7,12:18:9.03:141,9,0	0/0:14,0:13:3:0,3,27	0/1:13,1:13:8.09:64,0,8	1/1:22,10:31:21.06:296,21,0	1/1:9,3:13:6.02:90,6,0	0/1:12,7:21:3.48:85,0,3	1/1:9,8:17:12.04:188,12,0	1/1:7,8:16:6.02:94,6,0	0/0:15,0:16:12.51:0,13,280	1/1:4,10:16:8.64:257,9,0	1/1:6,5:10:12.04:188,12,0	1/1:7,7:14:12.04:188,12,0	./.	1/1:11,9:18:5.99:94,6,0	1/1:17,2:18:12.04:176,12,0	0/0:18,8:27:0:0,0,0	./.	1/1:9,10:20:5.36:221,5,0	0/0:12,1:14:1.55:0,2,4	0/1:9,5:14:59.40:120,0,59	1/1:7,7:15:18.06:281,18,0	1/1:1,2:4:9.02:121,9,0
chr10	31489447	.	GTGCGCGCGCGTGCA	G	274.58	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.808;DP=535;FS=5.018;HRun=0;HaplotypeScore=225.8095;InbreedingCoeff=0.6953;MQ=53.93;MQ0=21;MQRankSum=-0.690;QD=21.12;ReadPosRankSum=-1.836;VQSLOD=2.3408;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:28:29.66:0,30,1459	0/0:6,0:6:12.04:0,12,599	0/0:10,0:3:8.79:0,9,64	0/0:19,0:6:14.16:0,14,161	0/0:15,0:15:21.07:0,21,1003	0/0:22,0:21:20.43:0,20,804	0/0:28,0:28:30.20:0,30,1314	0/0:19,0:18:51.17:0,51,2080	1/1:9,4:12:9.03:358,9,0	0/0:23,0:22:6.91:0,7,1813	0/0:20,0:20:16.89:0,17,1819	0/0:19,0:19:15.04:0,15,600	0/0:15,0:14:27.05:0,27,1075	0/0:28,0:28:20.91:0,21,1066	0/0:15,0:15:14.61:0,15,827	0/0:26,0:24:32.87:0,33,1477	0/0:20,0:20:51.13:0,51,1776	0/0:26,0:26:66.69:0,67,2834	0/0:9,0:7:18.06:0,18,685	0/0:15,0:14:15.05:0,15,656	0/0:27,0:26:18.73:0,19,1253	0/0:17,0:17:14.66:0,15,806	0/0:11,0:9:15.05:0,15,706	0/0:39,0:38:62.60:0,63,2871	0/0:16,0:16:34.67:0,35,1674	0/0:18,0:16:43.66:0,44,1754	0/0:18,0:17:42.14:0,42,1839	0/0:10,0:10:28.91:0,29,1045
chr10	31489783	.	AC	A	450.58	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.520;DP=523;FS=1.075;HRun=2;HaplotypeScore=59.9075;InbreedingCoeff=0.9618;MQ=95.91;MQ0=0;MQRankSum=-1.988;QD=32.18;ReadPosRankSum=1.051;VQSLOD=3.3685;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:66.20:0,66,1030	0/0:7,0:7:18.06:0,18,288	0/0:46,0:40:99:0,111,1755	0/0:42,0:34:93.27:0,93,1353	0/0:19,0:19:54.18:0,54,857	0/0:14,0:14:42.14:0,42,671	0/0:16,0:16:48.16:0,48,767	0/0:22,0:22:66.22:0,66,1032	1/1:0,14:14:39.13:545,39,0	0/0:18,0:18:54.18:0,54,851	0/0:19,0:19:57.18:0,57,884	0/0:21,0:21:60.20:0,60,947	0/0:11,0:11:33.11:0,33,524	0/0:14,0:14:36.12:0,36,576	0/0:23,0:23:69.24:0,69,1096	0/0:25,0:25:69.24:0,69,1099	0/0:18,0:18:54.18:0,54,845	0/0:19,0:19:57.19:0,57,908	0/0:15,0:15:45.15:0,45,712	0/0:16,0:16:45.15:0,45,717	0/0:22,0:22:63.21:0,63,1007	0/0:15,0:15:45.15:0,45,705	0/0:15,0:15:45.15:0,45,716	0/0:12,0:12:33.06:0,33,479	0/0:17,0:17:45.15:0,45,716	0/0:14,0:14:42.14:0,42,663	0/0:17,0:17:51.17:0,51,812	0/0:6,0:6:12:0,12,163
chr10	31489803	.	AACACAC	A	976.50	PASS	AB=0.882;AC=34;AF=0.708;AN=48;BaseQRankSum=2.516;DP=530;FS=0.000;HRun=0;HaplotypeScore=111.8262;InbreedingCoeff=0.4801;MQ=72.32;MQ0=10;MQRankSum=-2.163;QD=3.22;ReadPosRankSum=0.160;VQSLOD=1.6762;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:27,6:30:3.01:60,3,0	1/1:5,0:8:6.01:66,6,0	./.	./.	./.	1/1:13,0:13:3.01:42,3,0	0/1:9,4:13:0:0,0,0	0/0:21,0:21:4.50:0,4,22	0/0:21,0:21:20.12:0,20,592	1/1:16,5:21:4.04:144,4,0	1/1:16,0:16:2.34:14,2,0	1/1:20,0:20:5.42:65,5,0	./.	1/1:12,4:16:2.90:60,3,0	0/0:27,0:27:30.08:0,30,752	1/1:14,2:22:9.03:162,9,0	1/1:16,0:16:3.01:58,3,0	1/1:14,0:15:3.01:42,3,0	0/0:16,0:16:6:0,6,117	0/0:11,0:11:9.03:0,9,137	0/0:25,0:28:33.08:0,33,770	1/1:13,4:17:2.48:19,2,0	1/1:14,0:14:5.34:21,5,0	1/1:13,7:20:3.01:60,3,0	1/1:10,4:14:3.01:60,3,0	1/1:11,5:16:11.98:130,12,0	0/1:21,0:21:1.78:2,0,526	1/1:1,5:6:6.02:120,6,0
chr10	31490317	.	C	CCT	4899.22	PASS	AB=0.592;AC=44;AF=0.786;AN=56;BaseQRankSum=-1.069;DP=688;FS=19.776;HRun=0;HaplotypeScore=85.9906;InbreedingCoeff=0.4414;MQ=68.87;MQ0=50;MQRankSum=-1.366;QD=9.64;ReadPosRankSum=1.136;VQSLOD=3.0094;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,26:33:4.71:96,5,0	1/1:18,0:17:20.93:247,21,0	0/0:56,0:18:15.41:0,15,160	0/0:71,0:26:19.62:0,20,169	1/1:6,11:16:3.01:49,3,0	1/1:7,11:18:6.49:100,6,0	1/1:15,0:15:23.74:215,24,0	1/1:42,0:40:66.69:560,67,0	1/1:2,0:9:6.59:48,7,0	1/1:8,20:28:54.51:525,55,0	1/1:17,0:17:18.41:244,18,0	0/1:5,13:18:37.57:40,0,38	1/1:14,0:14:17.13:168,17,0	0/0:8,20:26:2.60:0,3,10	0/0:25,0:25:51.01:0,51,497	0/1:6,20:27:31.57:133,0,32	0/1:14,20:36:49.41:128,0,49	1/1:5,19:25:12.04:197,12,0	1/1:12,0:12:16.86:112,17,0	1/1:9,0:9:10.81:80,11,0	1/1:23,0:22:26.23:205,26,0	1/1:17,0:17:26.95:245,27,0	1/1:19,0:19:22.30:326,22,0	0/1:15,27:40:7.50:234,0,7	1/1:12,0:11:21.89:228,22,0	1/1:16,0:14:11.80:206,12,0	1/1:21,0:21:41.78:275,42,0	1/1:15,0:13:26.87:241,27,0
chr10	31490330	.	CTGTGTG	C	277.58	PASS	AB=0.870;AC=6;AF=0.111;AN=54;BaseQRankSum=3.704;DP=683;FS=22.549;HRun=0;HaplotypeScore=125.6836;InbreedingCoeff=0.1430;MQ=58.05;MQ0=49;MQRankSum=-2.117;QD=3.23;ReadPosRankSum=-1.497;VQSLOD=0.4581;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:36.12:0,36,826	0/0:14,0:13:18.05:0,18,417	0/0:42,0:11:0.47:0,0,1	0/0:59,0:16:3.01:0,3,69	0/0:18,0:17:15.03:0,15,296	0/0:19,0:18:9.03:0,9,233	0/1:17,0:17:4.12:4,0,393	./.	0/0:11,0:11:8.39:0,8,143	0/0:35,0:34:66.19:0,66,1637	0/0:17,0:17:24.08:0,24,683	0/0:22,0:22:18.06:0,18,383	0/0:11,0:11:18.06:0,18,421	0/0:28,0:26:2.91:0,3,86	0/0:25,0:24:39.12:0,39,976	0/0:30,0:30:27.55:0,28,637	0/0:35,0:35:3.90:0,4,1045	0/0:26,0:25:27.09:0,27,722	0/1:7,2:9:56.86:85,0,57	1/1:8,8:15:3.01:61,3,0	0/1:20,0:22:13.63:14,0,33	0/0:16,0:16:24.02:0,24,519	0/0:21,0:21:16.43:0,16,864	0/0:38,0:37:30.07:0,30,695	0/0:15,0:14:24.08:0,24,658	0/0:22,0:20:50.18:0,50,1175	0/1:15,1:21:12.05:225,0,12	0/0:12,0:10:9.03:0,9,237
chr10	31492685	.	CTTT	C	2642.57	PASS	AB=0.786;AC=12;AF=0.214;AN=56;BaseQRankSum=8.826;DP=553;FS=4.694;HRun=14;HaplotypeScore=96.7424;InbreedingCoeff=0.7937;MQ=71.83;MQ0=1;MQRankSum=-2.580;QD=18.35;ReadPosRankSum=0.745;VQSLOD=2.8925;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:38:98.70:0,99,1555	0/0:7,0:7:15.05:0,15,282	0/1:16,0:13:9.62:10,0,209	0/0:15,0:13:13.32:0,13,175	0/0:19,0:26:69.13:0,69,1032	0/0:19,0:21:49.39:0,49,854	0/0:12,0:17:48.08:0,48,728	1/1:11,16:28:50.80:555,51,0	1/1:4,13:17:39.08:456,39,0	0/0:17,0:18:36.09:0,36,568	0/0:13,0:13:30.10:0,30,564	0/0:20,0:24:52.37:0,52,848	0/0:14,0:19:57.11:0,57,925	0/0:14,0:20:49.31:0,49,714	0/0:5,0:17:38.89:0,39,337	0/0:17,0:17:39.13:0,39,706	0/0:19,0:23:66.14:0,66,1077	0/0:15,0:18:43.32:0,43,637	1/1:6,16:22:24.82:527,25,0	1/1:1,18:19:38.94:437,39,0	0/1:3,8:12:9.20:155,0,9	0/0:16,0:20:44.19:0,44,740	0/0:11,0:12:29.24:0,29,483	0/0:13,1:16:10.03:0,10,629	0/0:21,0:25:69.15:0,69,1109	0/0:21,0:24:60.16:0,60,942	1/1:6,18:29:44.80:685,45,0	0/0:16,0:16:39.12:0,39,663
chr10	31494025	.	C	CCCGT	6838.66	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-11.288;DP=742;FS=0.000;HRun=0;HaplotypeScore=116.8560;InbreedingCoeff=0.9990;MQ=83.08;MQ0=0;MQRankSum=-2.473;QD=54.28;ReadPosRankSum=-2.600;VQSLOD=5.3277;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,138,2575	0/0:11,0:11:24.08:0,24,448	0/0:27,0:27:75.26:0,75,1360	0/0:17,0:17:38.67:0,39,588	0/0:20,0:20:51.17:0,51,951	0/0:23,0:23:69.24:0,69,1288	0/0:40,0:40:99:0,108,1976	1/1:8,8:22:57.07:1029,57,0	0/0:23,0:23:57.18:0,57,1032	0/0:22,0:22:66.22:0,66,1199	0/0:15,0:15:42.14:0,42,784	0/0:29,0:29:81.25:0,81,1441	0/0:30,0:30:90.31:0,90,1679	0/0:29,0:29:81.28:0,81,1501	0/0:27,0:27:78.24:0,78,1386	0/0:24,0:24:72.21:0,72,1246	0/0:40,0:40:99:0,117,2176	0/0:38,0:38:99:0,111,2056	1/1:10,19:32:84.26:1978,84,0	1/1:2,12:14:27.09:719,27,0	1/1:6,31:40:72.25:1919,72,0	0/0:34,0:34:90.30:0,90,1648	0/0:13,0:13:39.13:0,39,717	0/0:40,0:40:99:0,114,2108	0/0:25,0:25:69.24:0,69,1280	0/0:32,0:32:84.28:0,84,1529	1/1:1,16:18:45.15:1193,45,0	0/0:9,0:9:27.09:0,27,504
chr10	31494905	.	G	GT	2981.35	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=0.635;DP=557;FS=7.932;HRun=7;HaplotypeScore=69.4399;InbreedingCoeff=0.9669;MQ=79.38;MQ0=0;MQRankSum=-2.143;QD=27.35;ReadPosRankSum=-1.174;VQSLOD=3.7910;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:96.10:0,96,914	0/0:6,0:6:18.03:0,18,174	0/0:18,0:19:48.61:0,49,404	0/0:21,0:20:4.83:0,5,266	0/0:29,0:29:81.07:0,81,770	0/0:23,0:23:60.02:0,60,564	0/0:13,0:13:35.85:0,36,312	1/1:3,17:20:51.12:590,51,0	0/0:17,0:17:45.06:0,45,429	0/0:24,0:24:60.08:0,60,574	0/0:15,0:15:36.06:0,36,347	0/0:14,0:14:30.04:0,30,290	0/0:34,0:34:95.94:0,96,879	0/0:21,0:21:57.01:0,57,533	0/0:22,0:22:50.93:0,51,474	0/0:9,0:9:24.04:0,24,232	0/0:29,0:29:80.99:0,81,758	0/0:15,0:15:42.05:0,42,399	1/1:6,16:22:54.10:614,54,0	1/1:3,28:31:84.26:1010,84,0	1/1:0,12:12:33.10:399,33,0	0/0:20,0:20:54.09:0,54,521	0/0:9,0:9:21.03:0,21,203	0/0:15,0:15:39.02:0,39,368	0/0:20,0:20:51.07:0,51,488	0/0:20,0:20:57.08:0,57,547	1/1:3,21:24:45.14:543,45,0	0/0:14,0:14:33.05:0,33,319
chr10	31496964	.	AT	A	4049.35	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=5.752;DP=689;FS=5.587;HRun=1;HaplotypeScore=143.5880;InbreedingCoeff=0.9962;MQ=88.62;MQ0=0;MQRankSum=-11.080;QD=37.84;ReadPosRankSum=-2.421;VQSLOD=2.4230;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:40:99:0,114,1772	0/0:16,0:16:48.16:0,48,767	0/0:34,0:34:99:0,102,1588	0/0:22,1:23:60.18:0,60,953	0/0:33,0:33:99:0,99,1571	0/0:18,0:18:51.11:0,51,785	0/0:21,0:21:54.18:0,54,863	1/1:1,21:22:60.20:837,60,0	0/0:26,0:26:78.27:0,78,1247	0/0:51,0:51:99:0,154,2402	0/0:17,0:17:51.17:0,51,815	0/0:26,0:26:75.26:0,75,1199	0/0:24,0:24:63.21:0,63,1002	0/0:23,0:23:69.24:0,69,1098	0/0:36,0:36:99:0,105,1678	0/0:33,0:33:96.30:0,96,1489	0/0:30,0:30:87.30:0,87,1390	0/0:16,0:16:42.14:0,42,663	1/1:2,16:18:51.15:684,51,0	1/1:1,20:21:63.20:862,63,0	1/1:1,15:16:32.60:413,33,0	0/0:20,0:20:60.19:0,60,930	0/0:20,0:20:60.20:0,60,943	0/0:20,0:20:60.20:0,60,953	0/0:24,0:24:72.23:0,72,1129	0/0:25,0:25:75.24:0,75,1177	1/1:1,29:30:90.30:1253,90,0	0/0:5,0:5:15.05:0,15,240
chr10	31497774	.	G	GCAGTCAA	4422.65	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=8.832;DP=714;FS=159.384;HRun=0;HaplotypeScore=213.2515;InbreedingCoeff=0.9854;MQ=72.27;MQ0=0;MQRankSum=-6.864;QD=94.10;ReadPosRankSum=-1.510;VQSLOD=0.8978;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:45:99:0,123,3063	0/0:14,0:14:36.12:0,36,1004	0/0:27,0:26:71.40:0,71,1775	0/0:24,0:24:64.93:0,65,1505	0/0:38,0:37:99:0,99,2626	0/0:22,0:22:66.18:0,66,1780	0/0:17,0:17:45.15:0,45,1223	1/1:5,5:10:30.10:1106,30,0	0/0:25,0:25:75.25:0,75,2026	0/0:40,0:40:99:0,111,3029	0/0:24,0:24:63.22:0,63,1745	0/0:28,0:28:81.28:0,81,2189	0/0:28,0:28:75.26:0,75,2092	0/0:30,0:30:81.26:0,81,2197	0/0:37,0:37:99:0,111,3097	0/0:21,0:21:60.21:0,60,1638	0/0:27,0:27:72.21:0,72,1846	0/0:25,0:24:71.98:0,72,1940	1/1:1,6:9:24.08:851,24,0	1/1:4,7:13:30.10:1080,30,0	1/1:1,3:4:9.03:299,9,0	0/0:22,0:22:60.19:0,60,1600	0/0:24,0:24:66.23:0,66,1776	0/0:31,0:31:84.28:0,84,2275	0/0:31,0:31:90.30:0,90,2453	0/0:36,0:35:99:0,99,2654	1/1:3,8:11:27.09:1087,27,0	0/0:49,0:49:99:0,135,3651
chr10	31497782	.	AGTTT	A	1843.31	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=8.957;DP=724;FS=173.935;HRun=0;HaplotypeScore=192.6771;InbreedingCoeff=0.9729;MQ=67.53;MQ0=0;MQRankSum=-8.205;QD=44.96;ReadPosRankSum=-1.298;VQSLOD=-0.2265;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:40:99:0,117,3028	0/0:14,0:14:42.14:0,42,1034	0/0:32,0:29:72.17:0,72,1722	0/0:28,0:23:63.05:0,63,1514	0/0:32,0:32:72.23:0,72,1631	0/0:22,0:22:63.22:0,63,1680	0/0:20,0:20:48.15:0,48,1218	1/1:0,10:10:30.10:560,30,0	0/0:26,0:26:72.25:0,72,1877	0/0:41,0:41:99:0,114,2984	0/0:26,0:26:63.11:0,63,1549	0/0:28,0:28:81.26:0,81,1900	0/0:28,0:28:81.28:0,81,2068	0/0:31,0:31:87.30:0,87,2277	0/0:40,0:40:99:0,111,2761	0/0:23,0:23:63.18:0,63,1613	0/0:26,0:26:75.21:0,75,1908	0/0:24,0:23:57.20:0,57,1474	1/1:3,5:8:15.05:278,15,0	1/1:1,11:12:33.11:614,33,0	1/1:0,3:3:6.49:113,6,0	0/0:23,0:23:66.22:0,66,1627	0/0:23,0:23:63.22:0,63,1672	0/0:33,0:33:87.30:0,87,2314	0/0:35,0:35:99:0,99,2635	0/0:38,0:37:99:0,99,2588	1/1:0,8:8:24.08:447,24,0	0/0:49,0:49:99:0,141,3592
chr10	31497798	.	T	TA	433.56	PASS	AB=0.762;AC=9;AF=0.161;AN=56;BaseQRankSum=9.031;DP=771;FS=137.816;HRun=1;HaplotypeScore=207.2209;InbreedingCoeff=0.7875;MQ=53.43;MQ0=10;MQRankSum=-7.385;QD=7.88;ReadPosRankSum=-4.487;VQSLOD=0.0818;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:43:99:0,117,1375	0/0:12,0:12:35.69:0,36,325	0/0:40,0:24:59.28:0,59,754	0/0:36,0:19:51.12:0,51,643	0/0:27,0:27:56.24:0,56,497	0/0:23,0:23:68.86:0,69,763	0/0:21,0:21:47.75:0,48,514	0/1:11,5:13:60.83:61,0,88	0/0:26,0:25:71.45:0,71,687	0/0:43,0:43:99:0,126,1581	0/0:28,0:28:74.30:0,74,714	0/0:28,0:28:71.64:0,72,781	0/0:31,0:31:80.74:0,81,881	0/0:35,0:35:89.22:0,89,929	0/0:40,0:40:99:0,104,919	0/0:24,0:24:59.72:0,60,628	0/0:27,0:27:75.20:0,75,954	0/0:24,0:23:58.71:0,59,777	1/1:4,4:7:5.60:96,6,0	1/1:4,12:16:43.86:256,44,0	1/1:3,1:3:5.51:32,6,0	0/0:29,0:29:73.64:0,74,579	0/0:24,0:24:71.10:0,71,629	0/0:35,0:35:93.03:0,93,1126	0/0:40,0:40:99:0,103,839	0/0:34,0:34:96.20:0,96,1190	1/1:4,7:11:9.95:136,10,0	0/0:45,0:45:99:0,132,1548
chr10	31497802	.	T	TG	240.46	PASS	AB=0.654;AC=5;AF=0.093;AN=54;BaseQRankSum=4.344;DP=801;FS=71.363;HRun=0;HaplotypeScore=220.3103;InbreedingCoeff=0.4387;MQ=50.49;MQ0=11;MQRankSum=-4.937;QD=4.54;ReadPosRankSum=1.395;VQSLOD=0.9352;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:47:99:0,107,1437	0/0:13,0:13:38.90:0,39,395	0/0:38,0:21:60.18:0,60,769	0/0:38,0:18:48.15:0,48,615	0/0:26,0:26:52.55:0,53,513	0/0:26,0:26:68.55:0,69,805	0/0:23,0:23:55.15:0,55,613	0/1:10,5:12:34.32:34,0,130	0/0:28,0:27:75.99:0,76,748	0/0:45,0:44:99:0,126,1689	0/0:28,0:28:63.75:0,64,703	0/0:28,0:28:76.71:0,77,875	0/0:36,0:36:95.43:0,95,1065	0/0:35,0:35:92.12:0,92,1037	0/0:44,0:44:99:0,110,1029	0/0:26,0:27:65.80:0,66,690	0/0:28,0:28:81.13:0,81,1080	0/0:26,0:25:41.74:0,42,810	0/1:3,6:7:2.86:159,0,3	1/1:5,13:18:4.19:41,4,0	./.	0/0:31,0:31:71.19:0,71,619	0/0:24,0:24:60.24:0,60,619	0/0:37,0:37:99:0,99,1260	0/0:37,0:39:99:0,99,840	0/0:34,0:34:99:0,99,1276	0/1:4,7:11:4.84:118,0,5	0/0:42,0:42:99:0,123,1567
chr10	31497826	.	ATGTG	A	257.45	PASS	AB=1.000;AC=6;AF=0.111;AN=54;BaseQRankSum=6.409;DP=839;FS=48.144;HRun=0;HaplotypeScore=251.8490;InbreedingCoeff=0.5629;MQ=41.70;MQ0=25;MQRankSum=-4.681;QD=3.53;ReadPosRankSum=-2.257;VQSLOD=0.7793;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:65.05:0,65,2000	0/0:13,0:13:27.09:0,27,571	0/0:25,0:7:8.62:0,9,158	0/0:38,0:8:9.02:0,9,137	0/0:24,0:24:24:0,24,614	0/0:16,0:16:21.07:0,21,516	0/0:23,0:23:39.08:0,39,781	0/1:28,0:14:2.04:179,0,2	0/0:31,0:30:33.10:0,33,753	0/0:50,0:49:99:0,132,3081	0/0:34,0:33:44.64:0,45,1076	0/0:26,0:26:41.98:0,42,901	0/0:33,0:34:54.03:0,54,1237	0/0:39,0:39:41.77:0,42,906	0/0:48,1:49:45.06:0,45,964	0/0:39,0:38:45.15:0,45,1123	0/0:34,0:34:68.23:0,68,1908	0/0:30,0:29:75.18:0,75,1712	0/1:12,0:9:75.61:76,0,89	1/1:20,1:23:2.33:16,2,0	./.	0/0:32,1:33:15.04:0,15,390	0/0:26,1:27:36.08:0,36,844	0/0:42,0:42:82.47:0,82,1872	0/0:44,1:44:33.09:0,33,774	0/0:39,0:38:98.03:0,98,2300	1/1:9,1:10:8.49:104,8,0	0/0:22,0:22:37.13:0,37,1050
chr10	31497830	.	G	GTGTA	955.88	PASS	AB=0.900;AC=7;AF=0.130;AN=54;BaseQRankSum=6.427;DP=821;FS=56.020;HRun=0;HaplotypeScore=252.7378;InbreedingCoeff=0.7086;MQ=41.71;MQ0=24;MQRankSum=-5.465;QD=15.17;ReadPosRankSum=-2.431;VQSLOD=1.0087;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:64.59:0,65,1534	0/0:13,0:13:27.09:0,27,453	0/0:20,0:5:8.62:0,9,117	0/0:35,0:6:9.02:0,9,127	0/0:24,0:24:23.73:0,24,454	0/0:18,0:18:21.07:0,21,390	0/0:22,0:22:38.80:0,39,624	1/1:19,8:13:23:688,23,0	0/0:34,0:33:35.10:0,35,594	0/0:48,0:47:99:0,135,2414	0/0:32,0:31:43.31:0,43,798	0/0:26,0:26:41.92:0,42,716	0/0:35,0:35:53.87:0,54,925	0/0:38,0:38:44.67:0,45,726	0/0:49,0:49:47.94:0,48,768	0/0:40,0:39:48.09:0,48,868	0/0:35,0:34:54.45:0,54,1423	0/0:31,0:30:75.18:0,75,1317	0/1:8,1:6:71.58:177,0,72	1/1:10,10:20:3.01:56,3,0	./.	0/0:31,0:31:14.97:0,15,285	0/0:28,0:28:39.08:0,39,665	0/0:42,0:42:81.99:0,82,1419	0/0:42,0:41:36.08:0,36,608	0/0:40,0:39:99:0,114,1877	1/1:5,2:7:8.66:167,9,0	0/0:20,0:20:40.11:0,40,870
chr10	31497845	.	TGC	T	176.12	PASS	AB=0.957;AC=7;AF=0.130;AN=54;BaseQRankSum=7.502;DP=856;FS=42.218;HRun=0;HaplotypeScore=247.3988;InbreedingCoeff=0.4080;MQ=41.07;MQ0=25;MQRankSum=-6.066;QD=2.20;ReadPosRankSum=-4.706;VQSLOD=0.6604;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:92.99:0,93,1734	0/0:14,0:14:15.74:0,16,474	0/1:25,0:7:4.86:5,0,76	0/0:34,0:5:14.78:0,15,122	0/0:31,0:31:26.72:0,27,545	0/0:25,0:25:32.87:0,33,596	0/0:25,0:25:41.77:0,42,770	0/1:17,3:11:11.58:193,0,12	0/0:37,0:36:42.10:0,42,787	0/0:48,0:48:99:0,133,2641	0/0:33,0:32:51.07:0,51,1015	0/0:25,0:25:42.06:0,42,775	0/0:39,0:39:52.55:0,53,964	0/0:37,0:37:41.81:0,42,760	0/0:54,0:53:50.95:0,51,975	0/0:43,0:42:57.03:0,57,1091	0/0:35,1:35:46.28:0,46,1553	0/0:31,0:31:90.22:0,90,1713	0/1:12,0:4:13.25:24,0,13	1/1:18,1:19:2.79:13,3,0	./.	0/0:35,0:35:9.16:0,9,354	0/0:27,0:27:39:0,39,714	0/0:45,0:45:81.11:0,81,1525	0/0:43,0:42:37.72:0,38,693	0/0:42,0:41:99:0,117,2141	1/1:3,1:4:5.90:58,6,0	0/0:20,0:20:22.02:0,22,817
chr10	31497846	.	GCA	G	115.75	PASS	AB=0.988;AC=7;AF=0.130;AN=54;BaseQRankSum=7.549;DP=852;FS=36.550;HRun=0;HaplotypeScore=246.3374;InbreedingCoeff=0.3154;MQ=41.07;MQ0=26;MQRankSum=-6.329;QD=1.48;ReadPosRankSum=-4.123;VQSLOD=0.9644;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:89.27:0,89,1686	0/0:13,0:13:15.74:0,16,476	0/1:26,1:8:6.84:7,0,232	0/0:34,0:5:15.05:0,15,238	0/0:28,3:31:26.72:0,27,536	0/0:24,0:24:29.78:0,30,586	0/0:25,0:25:41.80:0,42,793	0/1:19,0:11:20.49:140,0,20	0/0:37,0:36:42.11:0,42,767	0/0:47,1:48:99:0,115,2623	0/0:32,1:32:51.07:0,51,1011	0/0:26,0:26:45.06:0,45,765	0/0:38,1:39:52.56:0,53,996	0/0:36,1:37:41.78:0,42,712	0/0:54,0:53:50.97:0,51,1010	0/0:41,1:41:57:0,57,1133	0/0:35,1:35:62.29:0,62,1528	0/0:31,0:31:90.31:0,90,1748	0/1:10,0:2:13.75:17,0,14	1/1:14,4:18:0.46:2,0,0	./.	0/0:35,0:35:9.16:0,9,332	0/0:26,1:27:39.05:0,39,741	0/0:46,0:46:81.17:0,81,1510	0/0:41,1:41:37.74:0,38,713	0/0:42,0:41:99:0,114,2129	1/1:4,0:4:5.97:60,6,0	0/0:16,4:20:3.52:0,4,788
chr10	31497867	.	TGC	T	407.94	PASS	AB=0.856;AC=7;AF=0.130;AN=54;BaseQRankSum=9.933;DP=977;FS=64.178;HRun=0;HaplotypeScore=348.4478;InbreedingCoeff=0.2510;MQ=40.73;MQ0=21;MQRankSum=-8.819;QD=2.72;ReadPosRankSum=-3.066;VQSLOD=-0.2361;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,1:38:77.63:0,78,1426	0/0:15,2:17:18.75:0,19,531	0/0:43,0:12:32.93:0,33,544	0/0:45,0:10:23.95:0,24,419	0/0:41,13:54:29.65:0,30,610	0/0:26,1:27:29.89:0,30,609	0/0:28,0:28:44.71:0,45,798	0/0:5,0:2:1.50:0,1,4	0/0:39,0:38:39.56:0,40,787	0/1:45,7:52:99:138,0,2167	0/0:36,3:38:45.01:0,45,834	0/0:25,1:26:42.54:0,43,812	0/0:42,3:45:55.81:0,56,982	0/0:39,0:39:36.39:0,36,682	0/0:67,2:68:62.99:0,63,1219	0/0:47,2:48:51.02:0,51,998	0/0:26,2:27:23.36:0,23,1112	0/0:33,0:33:91.83:0,92,1836	0/0:8,0:1:2.94:0,3,18	1/1:6,5:11:0.47:1,0,0	./.	0/0:43,7:50:6.28:0,6,295	0/0:33,5:38:29.79:0,30,699	0/0:53,1:54:87.02:0,87,1592	0/0:44,6:49:37.64:0,38,737	0/1:40,9:49:99:245,0,1908	1/1:2,4:6:2.73:12,3,0	0/1:26,6:32:99:119,0,754
chr10	31497868	.	GCA	G	99.46	PASS	AB=0.978;AC=9;AF=0.167;AN=54;BaseQRankSum=9.595;DP=981;FS=61.994;HRun=0;HaplotypeScore=350.3155;InbreedingCoeff=0.3460;MQ=40.73;MQ0=21;MQRankSum=-8.282;QD=0.62;ReadPosRankSum=-3.127;VQSLOD=-0.2684;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:77.67:0,78,1443	0/0:18,0:18:18.76:0,19,537	0/0:43,0:12:32.99:0,33,604	0/0:46,0:11:30.07:0,30,549	0/0:53,1:54:29.65:0,30,599	0/0:27,0:27:29.79:0,30,610	0/0:29,0:29:47.61:0,48,865	1/1:4,0:1:1.55:4,2,0	0/0:38,0:38:39.56:0,40,776	0/1:50,1:51:7.73:8,0,2167	0/0:39,0:38:45.07:0,45,845	0/0:26,0:26:42.55:0,43,822	0/0:46,0:46:58.05:0,58,1083	0/0:39,0:39:36.40:0,36,708	0/0:71,0:70:66:0,66,1282	0/0:50,0:49:50.98:0,51,986	0/0:28,0:27:46.28:0,46,1166	0/0:32,2:34:91.71:0,92,1867	0/1:8,0:1:0:0,0,0	0/1:9,1:10:0:0,0,0	./.	0/0:48,1:49:6.31:0,6,296	0/0:37,0:37:29.88:0,30,717	0/0:55,0:55:87.21:0,87,1674	0/0:50,0:49:37.64:0,38,738	0/1:49,0:49:99:100,0,1816	1/1:6,0:6:2.34:12,2,0	0/1:32,0:32:82.33:82,0,726
chr10	31497881	.	C	CAT	639.73	PASS	AC=4;AF=0.080;AN=50;BaseQRankSum=2.581;DP=984;FS=12.329;HRun=0;HaplotypeScore=400.9309;InbreedingCoeff=0.7700;MQ=40.29;MQ0=13;MQRankSum=-3.502;QD=13.91;ReadPosRankSum=-1.514;VQSLOD=2.5625;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:62.35:0,62,933	0/0:19,0:19:28.69:0,29,443	0/0:45,0:14:38.07:0,38,507	0/0:52,0:16:31.29:0,31,525	0/0:61,0:61:27.15:0,27,480	0/0:29,0:29:26.39:0,26,438	0/0:32,0:32:53.37:0,53,863	./.	1/1:10,28:37:38.15:733,38,0	0/0:58,0:56:94.11:0,94,1894	0/0:32,0:32:38.06:0,38,556	0/0:30,0:30:40.75:0,41,640	0/0:49,0:49:55.45:0,55,774	0/0:41,0:41:33.53:0,34,505	0/0:71,0:71:60.53:0,61,1062	0/0:47,1:48:38.11:0,38,607	0/0:25,0:24:57.60:0,58,841	0/0:33,0:33:95.81:0,96,1507	./.	1/1:8,0:8:0.89:2,1,0	./.	0/0:49,0:49:13.72:0,14,220	0/0:39,0:39:45.43:0,45,701	0/0:51,0:51:93.22:0,93,1442	0/0:51,0:51:33.09:0,33,544	0/0:52,0:52:7.67:0,8,1528	0/0:6,0:6:5.10:0,5,23	0/0:27,0:27:43.94:0,44,552
chr10	31497888	.	ACATG	A	298.39	PASS	AB=0.982;AC=7;AF=0.140;AN=50;BaseQRankSum=10.369;DP=978;FS=56.133;HRun=0;HaplotypeScore=407.7696;InbreedingCoeff=0.0005;MQ=39.87;MQ0=15;MQRankSum=-8.230;QD=1.72;ReadPosRankSum=-0.046;VQSLOD=0.1201;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:53.70:0,54,1504	0/0:20,0:20:37.79:0,38,847	0/0:51,0:16:26.36:0,26,796	0/0:52,1:16:20.18:0,20,931	0/0:57,1:58:29.65:0,30,752	0/0:28,0:28:28.42:0,28,746	0/0:34,0:34:63.85:0,64,1729	./.	0/0:40,0:39:49:0,49,958	0/1:56,3:57:49.56:50,0,3000	0/0:30,0:30:30.96:0,31,870	0/0:30,0:30:46.59:0,47,1132	0/0:47,2:49:13.61:0,14,1285	0/0:43,0:43:36.25:0,36,919	0/0:72,0:72:77.18:0,77,1977	0/0:46,0:46:36.44:0,36,1012	0/1:22,1:22:9.85:10,0,1364	0/0:32,0:32:76.27:0,76,2445	./.	1/1:6,0:7:0.24:1,0,0	./.	0/0:41,1:43:16.51:0,17,358	0/0:39,1:40:46.99:0,47,1153	0/0:48,0:48:93.23:0,93,2639	0/0:54,0:54:33.93:0,34,864	0/1:53,0:53:99:164,0,2668	0/1:5,0:5:17.65:18,0,40	0/1:26,0:26:99:168,0,612
chr10	31497908	.	ACGTG	A	683.43	PASS	AB=0.775;AC=4;AF=0.080;AN=50;BaseQRankSum=9.010;DP=981;FS=61.187;HRun=0;HaplotypeScore=431.9509;InbreedingCoeff=0.0185;MQ=37.87;MQ0=18;MQRankSum=-8.181;QD=4.27;ReadPosRankSum=-0.823;VQSLOD=-0.5340;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,1:25:32.57:0,33,702	0/0:17,2:19:21.94:0,22,416	0/0:39,0:14:41.35:0,41,895	0/0:43,1:18:48.14:0,48,1104	0/0:42,16:61:36.15:0,36,637	0/0:26,0:26:24.77:0,25,607	0/0:32,0:32:52.07:0,52,1353	./.	0/0:34,0:36:45.43:0,45,986	0/1:60,3:67:99:417,0,2164	0/0:28,4:33:30.48:0,30,573	0/0:35,0:35:35.28:0,35,865	0/0:47,0:47:32.19:0,32,849	0/0:49,0:49:37.80:0,38,832	0/0:73,0:75:69.46:0,69,1404	0/0:45,0:47:32:0,32,749	0/0:22,0:22:10.19:0,10,1070	0/0:28,0:28:38.72:0,39,1602	./.	0/0:7,0:9:0.47:0,0,1	./.	0/0:35,8:47:20.12:0,20,328	0/0:31,6:39:34.91:0,35,747	0/0:45,0:46:80.96:0,81,1983	0/0:41,6:51:28.17:0,28,571	0/1:52,3:59:99:212,0,2134	0/1:2,0:5:26.26:26,0,38	0/1:12,13:25:99:135,0,454
chr10	31497934	.	GTA	G	368.48	PASS	AB=0.910;AC=6;AF=0.115;AN=52;BaseQRankSum=7.895;DP=900;FS=51.895;HRun=0;HaplotypeScore=379.2090;InbreedingCoeff=-0.0470;MQ=34.19;MQ0=21;MQRankSum=-7.236;QD=1.82;ReadPosRankSum=2.996;VQSLOD=0.8347;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:18:11.95:0,12,197	0/0:20,2:22:6.48:0,6,117	0/0:23,0:8:21.07:0,21,380	0/0:24,0:9:27.08:0,27,486	0/0:43,12:55:11.54:0,12,234	0/1:21,2:23:4.73:5,0,119	0/0:26,0:25:31.01:0,31,511	./.	0/0:36,0:36:31.16:0,31,502	0/1:68,9:72:99:257,0,1096	0/0:30,4:34:11.79:0,12,195	0/0:31,0:31:19.93:0,20,321	0/0:48,0:47:14.63:0,15,486	0/0:49,0:49:24.55:0,25,434	0/0:66,0:66:30.57:0,31,576	0/0:45,1:46:25.45:0,25,325	0/0:18,0:17:2.14:0,2,308	0/0:19,0:19:11.13:0,11,567	0/1:9,0:3:2.05:2,0,48	0/1:9,0:9:0.54:1,0,1	./.	0/0:41,7:47:4.73:0,5,118	0/0:24,8:32:16.35:0,16,306	0/0:38,1:38:27.09:0,27,520	0/0:41,5:46:13.01:0,13,297	0/1:54,4:56:99:185,0,965	0/0:5,0:5:5.14:0,5,24	0/1:16,11:27:21.31:21,0,303
chr10	31497940	.	GTA	G	1793.71	PASS	AB=0.878;AC=15;AF=0.288;AN=52;BaseQRankSum=10.735;DP=861;FS=74.141;HRun=0;HaplotypeScore=353.3925;InbreedingCoeff=-0.3128;MQ=33.57;MQ0=19;MQRankSum=-8.571;QD=3.65;ReadPosRankSum=0.680;VQSLOD=-0.2989;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:17:8.77:0,9,156	0/1:14,10:24:78.15:78,0,107	0/0:17,0:6:18.06:0,18,314	0/0:20,0:8:24.08:0,24,431	0/1:47,4:51:99:139,0,205	0/1:20,1:21:25.93:26,0,63	0/0:22,0:21:25.02:0,25,397	./.	0/0:34,2:36:30.46:0,30,410	0/1:46,30:71:99:488,0,772	0/1:25,11:36:50.61:51,0,150	0/0:30,0:30:15.85:0,16,259	0/1:44,4:47:59.62:60,0,347	0/0:46,1:47:18.33:0,18,326	0/0:66,0:66:27.56:0,28,522	0/0:42,0:42:13.32:0,13,152	0/1:15,0:14:36.17:36,0,224	0/0:18,0:18:26.25:0,26,611	0/1:6,2:3:23.13:82,0,23	1/1:7,0:8:0.68:4,1,0	./.	0/1:43,5:47:85.54:86,0,105	0/1:31,0:31:99:102,0,201	0/0:37,1:37:27.07:0,27,462	0/1:41,3:44:20.55:21,0,218	0/1:52,5:55:99:455,0,760	0/0:5,0:5:3.45:0,3,23	0/1:21,4:25:99:314,0,162
chr10	31497950	.	G	GTA	1259.15	PASS	AB=0.877;AC=10;AF=0.192;AN=52;BaseQRankSum=6.905;DP=706;FS=22.065;HRun=0;HaplotypeScore=292.0839;InbreedingCoeff=-0.1994;MQ=32.44;MQ0=13;MQRankSum=-5.636;QD=4.45;ReadPosRankSum=4.526;VQSLOD=1.3471;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:14:8.26:0,8,97	0/0:20,2:22:5.89:0,6,64	0/0:7,0:2:5.95:0,6,42	0/0:9,0:4:5.91:0,6,59	0/0:33,6:39:1.24:0,1,40	0/1:12,5:17:13.43:13,0,18	0/0:16,2:17:11.53:0,12,104	./.	0/0:23,7:30:9.78:0,10,71	0/1:56,10:62:99:663,0,431	0/0:24,5:29:1.98:0,2,45	0/0:23,5:28:2.70:0,3,62	0/1:40,4:43:22.26:22,0,102	0/0:38,7:45:9.69:0,10,157	0/0:45,13:58:12.47:0,12,222	0/1:32,6:38:0.72:1,0,14	0/1:12,0:11:7.18:7,0,73	0/1:15,1:16:47.20:47,0,258	0/0:5,0:3:8.59:0,9,49	1/1:5,0:5:0.47:1,0,0	./.	0/1:30,7:36:0.38:0,0,22	0/0:17,9:26:0.51:0,1,21	0/0:30,1:30:12:0,12,183	0/0:29,4:33:0.51:0,1,84	0/1:37,11:46:99:615,0,466	0/0:5,0:5:5.93:0,6,55	0/0:11,4:15:6.32:0,6,56
chr10	31498992	.	G	GGT	458.97	PASS	AC=6;AF=0.115;AN=52;BaseQRankSum=3.174;DP=319;FS=5.092;HRun=0;HaplotypeScore=57.7669;InbreedingCoeff=0.7889;MQ=85.90;MQ0=0;MQRankSum=-4.131;QD=30.60;ReadPosRankSum=-0.582;VQSLOD=4.8281;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:51.09:0,51,701	0/0:7,0:7:21.07:0,21,309	0/0:13,0:9:39.10:0,39,538	0/0:17,0:15:33.11:0,33,554	0/0:11,0:11:26.87:0,27,300	0/0:18,0:18:42.14:0,42,613	0/0:20,0:20:57.19:0,57,837	./.	0/0:13,0:13:33.11:0,33,485	0/0:9,0:9:27.07:0,27,377	0/0:6,0:6:12.04:0,12,177	0/0:18,0:18:54.14:0,54,770	0/0:21,0:21:60.20:0,60,874	0/0:29,0:29:78.26:0,78,1127	0/0:17,0:17:48.16:0,48,706	0/0:14,0:14:39.05:0,39,525	0/0:10,0:10:24.08:0,24,351	0/0:12,0:12:27.05:0,27,366	1/1:0,1:1:3.01:56,3,0	1/1:1,10:11:24.08:433,24,0	./.	0/0:10,0:10:30.01:0,30,389	0/0:7,0:7:17.98:0,18,239	0/0:11,0:11:0.47:0,0,1	0/0:4,0:4:12:0,12,152	0/0:11,0:11:30.10:0,30,433	1/1:1,2:3:6.02:91,6,0	0/0:2,0:2:6.02:0,6,88
chr10	31499008	.	TCA	T	451.56	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=5.549;DP=377;FS=0.000;HRun=0;HaplotypeScore=65.1804;InbreedingCoeff=0.8184;MQ=90.12;MQ0=0;MQRankSum=-3.762;QD=20.53;ReadPosRankSum=0.591;VQSLOD=3.6976;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:60.21:0,60,1121	0/0:8,0:8:24.08:0,24,444	0/0:18,0:15:51.13:0,51,857	0/0:20,0:19:60.21:0,60,1084	0/0:12,0:12:30.07:0,30,522	0/0:21,0:21:57.18:0,57,1016	0/0:18,0:18:48.16:0,48,896	1/1:0,3:3:3:25,3,0	0/0:13,0:13:36.12:0,36,672	0/0:10,0:10:30.10:0,30,534	0/0:7,0:7:12.04:0,12,224	0/0:20,0:20:48.16:0,48,896	0/0:23,0:23:69.24:0,69,1288	0/0:34,0:34:99:0,99,1847	0/0:28,0:28:75.26:0,75,1401	0/0:17,0:17:48.16:0,48,896	0/0:15,0:15:42.10:0,42,741	0/0:17,0:17:48.16:0,48,897	1/1:1,1:2:3.01:44,3,0	1/1:2,9:11:20.87:308,21,0	1/1:0,1:1:3.01:44,3,0	0/0:11,0:11:33.11:0,33,609	0/0:5,0:5:15.05:0,15,269	0/0:13,0:13:19.48:0,19,338	0/0:5,0:5:15.05:0,15,281	0/0:13,0:13:39.13:0,39,730	1/1:0,5:5:12.04:176,12,0	0/0:3,0:3:6.02:0,6,112
chr10	31499384	.	G	GT	3949.51	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=3.540;DP=610;FS=1.236;HRun=0;HaplotypeScore=113.6904;InbreedingCoeff=0.8856;MQ=84.35;MQ0=0;MQRankSum=-3.260;QD=29.26;ReadPosRankSum=-3.454;VQSLOD=2.4984;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:42.61:0,43,242	0/0:16,0:16:21.79:0,22,226	0/0:26,0:26:78.08:0,78,1024	0/0:18,0:18:13.85:0,14,587	0/0:29,0:30:76.20:0,76,444	0/0:26,0:26:65.95:0,66,368	0/0:16,0:16:43.30:0,43,234	1/1:4,20:23:60.09:753,60,0	0/0:22,0:22:59.15:0,59,338	0/0:37,0:37:99:0,102,501	0/0:20,0:20:52.81:0,53,295	0/0:18,0:18:52.25:0,52,294	0/0:25,0:25:44.70:0,45,340	0/0:27,0:27:78.25:0,78,434	0/0:22,0:22:63.21:0,63,878	0/0:21,0:21:28.42:0,28,243	0/0:11,0:11:29.07:0,29,164	0/0:18,0:18:49.27:0,49,272	1/1:3,24:28:73.11:871,73,0	1/1:3,21:24:59.10:766,59,0	1/1:0,21:21:60.19:758,60,0	0/0:25,0:25:72.36:0,72,396	0/0:12,0:12:34.75:0,35,194	0/0:18,0:18:25.55:0,26,242	0/0:27,0:27:58.89:0,59,417	0/0:23,0:23:59.68:0,60,298	1/1:2,24:26:62.10:788,62,0	0/1:12,0:12:13.84:14,0,123
chr10	31500621	.	A	ACGG	6924.46	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-3.327;DP=775;FS=2.236;HRun=0;HaplotypeScore=112.2773;InbreedingCoeff=0.9990;MQ=88.93;MQ0=0;MQRankSum=-4.634;QD=50.54;ReadPosRankSum=-2.607;VQSLOD=6.4070;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:56:99:0,166,2645	0/0:7,0:7:21.07:0,21,330	0/0:32,0:32:78.26:0,78,1227	0/0:29,0:29:75.26:0,75,1197	0/0:26,0:26:75.24:0,75,1181	0/0:24,0:24:72.23:0,72,1133	0/0:19,0:19:54.18:0,54,868	1/1:8,19:27:63.21:1367,63,0	0/0:25,0:25:66.22:0,66,1058	0/0:36,0:36:96.33:0,96,1543	0/0:19,0:19:48.16:0,48,772	0/0:31,0:31:84.27:0,84,1327	0/0:31,0:31:69.18:0,69,1048	0/0:22,0:22:60.19:0,60,941	0/0:36,0:36:99:0,102,1639	0/0:36,0:36:99:0,99,1566	0/0:41,0:41:99:0,117,1873	0/0:24,0:24:63.17:0,63,976	1/1:12,13:25:51.18:1106,51,0	1/1:2,25:28:66.23:1414,66,0	1/1:4,33:38:90.31:1983,90,0	0/0:25,0:25:72.22:0,72,1132	0/0:19,0:19:51.16:0,51,795	0/0:26,0:26:63.21:0,63,1013	0/0:24,0:24:60.20:0,60,963	0/0:35,0:35:99:0,102,1640	1/1:2,17:19:48.16:1055,48,0	0/0:15,0:15:45.15:0,45,714
chr10	31501200	.	C	CAG	500.61	PASS	AB=0.957;AC=14;AF=0.292;AN=48;BaseQRankSum=-1.858;DP=558;FS=6.694;HRun=0;HaplotypeScore=115.1584;InbreedingCoeff=0.1834;MQ=74.38;MQ0=12;MQRankSum=-0.718;QD=2.28;ReadPosRankSum=-1.609;VQSLOD=1.5212;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:28:34.28:43,0,34	0/0:9,0:9:5.85:0,6,46	./.	0/1:45,0:20:0:0,0,0	./.	0/1:16,0:16:14.80:15,0,55	0/0:15,0:17:14.65:0,15,111	./.	1/1:11,1:18:6:52,6,0	0/0:14,0:16:4.38:0,4,26	0/0:10,0:10:3:0,3,27	0/0:10,0:13:8.69:0,9,60	0/0:16,0:18:5.71:0,6,45	0/0:15,0:15:8.89:0,9,96	1/1:13,3:17:3.01:44,3,0	0/0:20,0:20:21.50:0,22,216	0/1:22,9:33:45.90:158,0,46	0/0:20,0:20:1.58:0,2,67	0/0:18,0:17:17.04:0,17,83	0/0:39,0:39:7.71:0,8,31	./.	0/0:12,0:14:8.83:0,9,69	1/1:19,0:19:6.02:74,6,0	1/1:12,6:18:9.03:132,9,0	0/0:23,0:23:2.19:0,2,7	0/1:13,0:13:15.64:104,0,16	0/0:24,0:24:2.84:0,3,14	0/1:11,0:11:17.63:18,0,18
chr10	31501216	.	GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAA	G	2307.11	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=8.430;DP=540;FS=4.796;HRun=0;HaplotypeScore=372.6200;InbreedingCoeff=0.8557;MQ=60.17;MQ0=14;MQRankSum=-4.965;QD=26.52;ReadPosRankSum=-0.466;VQSLOD=1.0968;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:60.96:0,61,6557	0/0:12,0:12:32.69:0,33,2515	0/0:21,0:11:32.39:0,32,1017	0/0:37,0:12:15.37:0,15,509	0/0:14,0:14:30.57:0,31,3672	0/0:20,0:20:53.96:0,54,5125	0/0:15,0:15:39.13:0,39,4158	1/1:14,0:14:11.97:196,12,0	0/0:15,0:15:33.04:0,33,2820	0/0:20,0:20:60.21:0,60,6595	0/0:18,0:18:48.16:0,48,5524	0/0:14,0:14:36.12:0,36,4242	0/0:22,0:22:51.60:0,52,5408	0/0:15,0:15:30.57:0,31,3954	0/0:18,0:18:39.13:0,39,4076	0/0:19,0:19:45.47:0,45,6172	0/0:35,0:34:69.24:0,69,7872	0/0:26,0:25:72.25:0,72,6780	1/1:3,14:16:41.77:1042,42,0	1/1:15,21:36:22.58:858,23,0	0/1:7,0:7:13.87:18,0,14	0/0:15,0:15:41.65:0,42,4394	0/0:17,0:17:45.01:0,45,4300	0/0:16,0:15:24.04:0,24,2526	0/0:25,0:25:57.56:0,58,5574	0/0:18,0:18:54.19:0,54,5949	1/1:12,1:13:14.08:353,14,0	0/0:12,0:12:36.12:0,36,3716
chr10	31501218	.	G	GA	1141.94	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=9.379;DP=532;FS=6.371;HRun=1;HaplotypeScore=104.1837;InbreedingCoeff=0.8328;MQ=56.11;MQ0=15;MQRankSum=-7.316;QD=13.76;ReadPosRankSum=-3.543;VQSLOD=1.5396;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:50.07:0,50,664	0/0:11,0:11:21:0,21,247	0/0:21,0:11:24.68:0,25,246	0/0:34,0:8:8.10:0,8,107	0/0:14,0:14:30.10:0,30,382	0/0:19,0:19:48.11:0,48,572	0/0:14,0:14:35.95:0,36,401	1/1:7,5:12:33.09:407,33,0	0/0:15,0:15:25.72:0,26,265	0/0:20,0:20:60.02:0,60,723	0/0:18,0:18:48.15:0,48,611	0/0:15,0:15:38.98:0,39,441	0/0:20,0:20:48.01:0,48,590	0/0:17,0:17:36.09:0,36,434	0/0:18,0:18:37.67:0,38,462	0/0:20,0:20:48.61:0,49,603	0/0:35,0:34:63.37:0,63,721	0/0:25,0:24:63.61:0,64,783	0/1:17,0:16:3.27:65,0,3	1/1:36,0:36:30.96:385,31,0	1/1:5,0:5:1.44:42,1,0	0/0:14,0:14:33.92:0,34,403	0/0:16,0:16:38.58:0,39,430	0/0:16,0:15:16.70:0,17,165	0/0:24,0:24:53.99:0,54,654	0/0:19,0:19:52.65:0,53,610	1/1:13,0:13:29.80:397,30,0	0/0:14,0:13:36.05:0,36,414
chr10	31502754	.	A	AAAGAAG	3858.29	PASS	AB=0.891;AC=38;AF=0.760;AN=50;BaseQRankSum=0.300;DP=574;FS=0.000;HRun=0;HaplotypeScore=115.8915;InbreedingCoeff=0.0774;MQ=46.00;MQ0=24;MQRankSum=-2.519;QD=7.78;ReadPosRankSum=0.959;VQSLOD=2.2249;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:18,0:13:16.94:17,0,35	1/1:5,8:13:5.69:106,6,0	./.	./.	1/1:23,1:24:17.20:389,17,0	1/1:15,0:16:11.46:380,11,0	0/1:21,0:16:9.85:56,0,10	1/1:27,0:15:3.01:36,3,0	./.	1/1:11,12:20:33.10:826,33,0	1/1:14,10:26:14.81:150,15,0	0/1:17,0:30:42.70:43,0,50	0/1:23,0:20:0.64:273,0,1	0/0:23,0:23:32.75:0,33,772	1/1:6,16:21:3.01:96,3,0	1/1:16,0:17:16.09:169,16,0	0/1:23,0:19:6.15:23,0,6	1/1:11,0:12:8.70:132,9,0	1/1:15,0:10:6.01:64,6,0	1/1:17,0:17:15.02:177,15,0	1/1:15,0:16:3.01:31,3,0	0/0:28,0:29:56.61:0,57,1030	0/1:17,0:18:35.72:92,0,36	0/1:24,0:25:3.43:101,0,3	1/1:10,0:13:17.92:187,18,0	0/1:14,0:11:70.60:89,0,71	1/1:35,0:29:8.60:221,9,0	1/1:12,0:12:12.02:201,12,0
chr10	31502816	.	AAGG	A	182.88	PASS	AB=0.994;AC=12;AF=0.214;AN=56;BaseQRankSum=8.956;DP=604;FS=37.330;HRun=0;HaplotypeScore=106.7988;InbreedingCoeff=0.2123;MQ=46.32;MQ0=18;MQRankSum=-7.906;QD=1.20;ReadPosRankSum=-3.673;VQSLOD=-0.6936;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:15:33.11:0,33,745	0/0:19,0:18:30.07:0,30,607	0/0:23,0:4:8.70:0,9,96	0/0:21,0:3:5.64:0,6,42	0/0:27,0:23:59.16:0,59,1125	0/0:29,0:23:35.26:0,35,776	0/0:23,0:17:11.44:0,11,566	1/1:6,8:8:20.81:145,21,0	1/1:5,0:4:4.66:11,5,0	0/0:24,0:23:62.60:0,63,1256	0/0:33,0:32:62.37:0,62,1278	0/0:27,0:27:54.16:0,54,1115	0/1:27,1:24:37.08:37,0,967	0/0:30,0:29:64.70:0,65,1335	0/0:28,0:27:47.57:0,48,1183	0/1:15,0:14:9.68:10,0,351	0/1:31,0:26:42.26:42,0,483	0/0:24,0:22:47.50:0,48,974	0/0:6,0:2:3.01:0,3,32	0/1:7,0:6:23.34:28,0,23	1/1:7,0:6:0.56:16,1,0	0/0:23,0:22:56.12:0,56,910	0/0:23,0:22:53.89:0,54,1024	0/0:30,0:22:26.54:0,27,789	0/1:30,0:27:16.90:17,0,959	0/0:27,0:22:59.60:0,60,1297	0/1:15,0:11:27.21:27,0,44	0/0:16,0:11:27.07:0,27,573
chr10	31502869	.	AAAG	A	4289.15	PASS	AB=0.814;AC=33;AF=0.635;AN=52;BaseQRankSum=-5.900;DP=535;FS=6.207;HRun=0;HaplotypeScore=84.4737;InbreedingCoeff=-0.0109;MQ=40.88;MQ0=56;MQRankSum=4.141;QD=9.11;ReadPosRankSum=2.378;VQSLOD=3.6821;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:24:21.15:162,0,21	1/1:7,5:9:6.02:85,6,0	./.	./.	1/1:9,21:26:21.46:224,21,0	1/1:19,2:18:22.16:329,22,0	1/1:13,2:13:9.03:108,9,0	1/1:16,0:2:2.74:12,3,0	0/0:7,0:5:5.91:0,6,54	0/1:12,4:13:9.92:300,0,10	1/1:7,18:24:23.99:277,24,0	0/1:23,4:24:18.96:498,0,19	0/1:20,7:23:60.45:334,0,60	1/1:10,11:17:2.27:35,2,0	0/0:24,0:23:51.17:0,51,876	0/0:4,14:16:6.02:0,6,66	0/1:37,0:28:99:129,0,143	1/1:24,0:22:8.75:324,9,0	0/1:3,0:6:59.75:60,0,83	1/1:7,0:4:5.71:70,6,0	0/0:12,0:8:2.14:0,2,33	0/1:8,4:8:24.65:57,0,25	1/1:11,1:11:8.95:123,9,0	0/1:17,13:20:0:0,0,0	0/1:17,7:17:6.49:301,0,6	0/1:14,22:25:99:524,0,310	0/1:15,0:11:29.39:121,0,29	1/1:22,0:18:16.29:216,16,0
chr10	31502874	.	AG	A	277.52	PASS	AB=0.782;AC=5;AF=0.096;AN=52;BaseQRankSum=1.829;DP=568;FS=6.629;HRun=1;HaplotypeScore=93.9832;InbreedingCoeff=0.2234;MQ=39.94;MQ0=60;MQRankSum=-3.922;QD=4.78;ReadPosRankSum=-1.254;VQSLOD=-0.2216;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:22:29.92:0,30,322	0/0:10,0:7:7.38:0,7,89	./.	./.	0/0:31,0:26:38.51:0,39,318	0/0:20,0:17:13.52:0,14,108	0/0:16,0:13:19.06:0,19,177	1/1:16,2:3:6.01:56,6,0	0/0:7,0:5:11.91:0,12,153	0/0:19,0:16:27.81:0,28,211	0/0:25,0:24:29.55:0,30,270	0/0:29,0:26:36.97:0,37,405	0/0:28,0:24:26.07:0,26,335	0/0:21,0:17:26.37:0,26,322	0/0:25,0:22:63.21:0,63,985	0/0:21,0:19:21.07:0,21,298	0/0:44,0:32:63.78:0,64,755	0/0:29,0:25:21.37:0,21,218	0/1:8,0:6:75.13:75,0,78	0/1:5,6:5:10.23:51,0,10	0/0:13,0:8:0.57:0,1,97	0/0:13,0:9:15.48:0,15,172	0/0:12,0:11:15.07:0,15,178	0/0:32,0:19:17.99:0,18,212	0/0:23,0:16:18.28:0,18,200	0/0:37,0:25:36.91:0,37,451	0/1:12,9:15:99:208,0,116	0/0:26,0:21:38.03:0,38,338
chr10	31502912	.	AAAG	A	2007.86	PASS	AB=0.983;AC=21;AF=0.420;AN=50;BaseQRankSum=-5.452;DP=672;FS=28.601;HRun=0;HaplotypeScore=114.0975;InbreedingCoeff=0.6236;MQ=37.14;MQ0=87;MQRankSum=2.993;QD=6.27;ReadPosRankSum=1.024;VQSLOD=0.7875;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:17:12.04:0,12,184	1/1:11,0:9:18.04:209,18,0	./.	./.	1/1:26,0:22:17.96:177,18,0	0/0:32,0:25:36.40:0,36,366	0/0:25,0:16:9.03:0,9,129	./.	0/0:7,0:5:5.27:0,5,21	0/1:18,0:14:36.22:54,0,36	1/1:22,0:20:15.01:161,15,0	1/1:30,0:27:32.97:337,33,0	0/0:28,0:23:0.21:0,0,233	0/0:23,0:18:21.50:0,22,250	0/0:22,0:19:8.97:0,9,47	0/0:26,0:23:27.08:0,27,429	1/1:44,0:33:11.32:319,11,0	1/1:13,13:23:5.81:51,6,0	0/0:28,0:15:8.24:0,8,115	0/0:23,0:14:16.76:0,17,168	1/1:15,0:9:0.89:2,1,0	0/0:18,0:14:14.97:0,15,163	0/0:11,0:11:11.97:0,12,123	0/1:35,2:23:2.76:344,0,3	1/1:28,0:20:30.05:348,30,0	1/1:37,0:23:14.84:145,15,0	0/0:31,0:25:32.36:0,32,342	0/1:23,0:16:41.80:42,0,77
chr10	31503052	.	T	TA	1489.25	PASS	AB=0.702;AC=10;AF=0.185;AN=54;BaseQRankSum=-5.512;DP=488;FS=18.627;HRun=11;HaplotypeScore=58.1372;InbreedingCoeff=0.6373;MQ=62.56;MQ0=0;MQRankSum=0.519;QD=13.42;ReadPosRankSum=-3.357;VQSLOD=1.1184;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:18:34.87:0,35,261	0/1:6,2:8:36.97:37,0,115	0/0:8,0:8:1.44:0,1,77	0/0:3,0:1:2.99:0,3,23	0/0:25,1:27:14.47:0,14,266	0/0:27,0:27:59.70:0,60,461	0/0:18,0:18:38.80:0,39,302	0/1:9,17:26:15.64:385,0,16	./.	0/0:21,0:19:38.83:0,39,302	0/0:26,1:27:15.93:0,16,455	0/0:20,0:18:41.79:0,42,323	0/0:15,0:13:35.85:0,36,279	0/0:10,0:8:17.92:0,18,139	0/0:18,0:19:13.08:0,13,236	0/0:24,0:23:59.73:0,60,458	0/0:10,0:10:26.84:0,27,205	0/0:19,0:19:41.32:0,41,306	1/1:6,8:14:4.98:202,5,0	1/1:4,15:19:31.23:287,31,0	1/1:1,11:12:27.05:274,27,0	0/0:16,0:15:32.85:0,33,255	0/0:17,0:18:34.85:0,35,261	0/0:20,1:23:21.42:0,21,327	0/0:15,0:16:31.86:0,32,238	0/0:19,0:18:26.35:0,26,189	1/1:7,25:29:27.86:464,28,0	0/0:15,0:14:32.86:0,33,255
chr10	31503578	.	T	TGAGAGA	3713.32	PASS	AB=1.000;AC=43;AF=0.896;AN=48;BaseQRankSum=-1.448;DP=528;FS=22.379;HRun=0;HaplotypeScore=129.8492;InbreedingCoeff=0.3919;MQ=72.49;MQ0=15;MQRankSum=-2.359;QD=8.05;ReadPosRankSum=-0.386;VQSLOD=1.0917;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:25:24.01:298,24,0	./.	0/1:23,0:15:0:0,0,0	./.	1/1:18,0:18:8.96:156,9,0	1/1:20,0:19:15.40:290,15,0	1/1:20,0:19:5.56:47,6,0	1/1:23,0:23:11.40:74,11,0	./.	1/1:28,0:27:20.55:286,21,0	1/1:19,0:19:9:100,9,0	1/1:26,0:26:20.97:312,21,0	1/1:30,0:29:15.04:198,15,0	1/1:18,0:18:12.04:291,12,0	0/0:17,0:19:12.04:0,12,211	1/1:21,0:21:15.03:238,15,0	1/1:15,5:21:11.63:236,12,0	1/1:18,0:19:15.52:325,16,0	1/1:13,0:13:6.89:55,7,0	1/1:22,0:22:9.01:116,9,0	0/1:11,0:11:8.30:18,0,8	1/1:18,0:18:12.01:134,12,0	0/1:16,0:16:0.01:0,0,0	1/1:13,0:13:8.99:151,9,0	1/1:19,0:18:3.01:92,3,0	1/1:18,0:17:17.63:260,18,0	1/1:15,0:20:2.12:37,2,0	./.
chr10	31504627	.	ACT	A	2124.46	PASS	AB=0.910;AC=12;AF=0.222;AN=54;BaseQRankSum=11.240;DP=810;FS=10.884;HRun=0;HaplotypeScore=114.2782;InbreedingCoeff=0.7544;MQ=60.64;MQ0=24;MQRankSum=-3.406;QD=12.07;ReadPosRankSum=0.263;VQSLOD=2.4815;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:43:90.29:0,90,1379	0/0:12,0:12:24.08:0,24,374	0/0:61,0:21:39.07:0,39,524	0/0:66,0:33:72.04:0,72,898	0/1:25,3:27:5.68:6,0,883	0/0:25,1:26:27.21:0,27,916	0/0:16,0:16:33.10:0,33,504	1/1:8,18:15:30.09:357,30,0	./.	0/0:36,0:35:39.78:0,40,1075	0/0:22,1:23:6.18:0,6,574	0/0:33,0:33:75.26:0,75,1188	0/0:25,0:25:72.23:0,72,1118	0/0:25,1:26:21.22:0,21,807	0/0:32,1:33:39.26:0,39,1057	0/0:33,1:34:45.29:0,45,1192	0/0:27,0:26:63.21:0,63,980	0/0:34,3:37:16.95:0,17,1243	1/1:13,8:18:24.07:285,24,0	1/1:5,18:21:42.13:504,42,0	1/1:10,21:30:39.12:467,39,0	0/0:31,0:31:54.18:0,54,812	0/1:20,2:22:20.79:21,0,641	0/0:35,0:35:48.54:0,49,1241	0/0:17,1:18:3.19:0,3,530	0/0:26,0:25:39.12:0,39,561	1/1:5,19:25:57.01:661,57,0	0/0:25,0:25:60.20:0,60,906
chr10	31505847	.	GC	G	5021.28	PASS	AC=10;AF=0.185;AN=54;BaseQRankSum=14.774;DP=662;FS=6.459;HRun=1;HaplotypeScore=80.6164;InbreedingCoeff=0.9997;MQ=89.73;MQ0=1;MQRankSum=-0.978;QD=40.17;ReadPosRankSum=0.214;VQSLOD=5.2178;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,153,2389	0/0:12,0:12:36.12:0,36,575	0/0:28,0:28:84.16:0,84,1247	0/0:24,0:24:66.22:0,66,1028	0/0:24,0:24:69.24:0,69,1103	0/0:26,0:26:75.26:0,75,1199	0/0:23,0:23:69.17:0,69,1006	1/1:0,21:21:63.21:880,63,0	./.	0/0:22,0:22:66.23:0,66,1053	0/0:15,0:15:42.11:0,42,647	0/0:31,0:31:93.30:0,93,1458	0/0:20,0:20:60.12:0,60,903	0/0:24,0:24:72.21:0,72,1101	0/0:26,0:26:78.25:0,78,1222	0/0:20,0:20:60.20:0,60,957	0/0:40,0:39:99:0,114,1816	0/0:20,0:19:57.19:0,57,903	1/1:0,20:20:60.18:810,60,0	1/1:0,25:25:72.17:983,72,0	1/1:0,28:28:81.27:1132,81,0	0/0:14,0:14:42.14:0,42,671	0/0:20,0:20:54.13:0,54,834	0/0:42,0:41:99:0,123,1957	0/0:20,0:20:60.20:0,60,959	0/0:24,0:24:72.25:0,72,1151	1/1:0,31:31:87.29:1216,87,0	0/0:10,0:10:27.07:0,27,403
chr10	31511296	.	GA	G	8160.07	PASS	AB=0.556;AC=37;AF=0.661;AN=56;BaseQRankSum=-3.691;DP=705;FS=0.709;HRun=11;HaplotypeScore=152.2517;InbreedingCoeff=0.9061;MQ=70.88;MQ0=4;MQRankSum=-2.353;QD=17.97;ReadPosRankSum=5.769;VQSLOD=3.7138;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,32:41:82.90:669,83,0	1/1:2,5:7:11.98:98,12,0	0/0:38,2:28:34.24:0,34,318	0/0:40,1:32:11.07:0,11,323	1/1:10,25:36:67.93:547,68,0	1/1:2,22:26:69.98:553,70,0	1/1:4,14:19:14.99:319,15,0	0/0:12,0:32:69.31:0,69,403	0/0:18,0:18:23.31:0,23,391	1/1:6,20:26:59.90:489,60,0	1/1:2,19:22:49.96:400,50,0	1/1:2,19:22:55.97:449,56,0	1/1:2,23:27:69.98:553,70,0	1/1:2,22:24:65.90:541,66,0	0/0:20,2:22:20.47:0,20,423	1/1:2,23:26:64.92:523,65,0	1/1:2,17:19:47.93:394,48,0	1/1:3,15:19:37.97:301,38,0	0/0:5,0:20:49.14:0,49,296	0/0:9,0:27:69.24:0,69,467	0/0:5,0:19:32.83:0,33,182	1/1:5,16:21:44.92:367,45,0	0/1:5,18:25:31.63:362,0,32	1/1:7,17:24:35.95:295,36,0	1/1:8,20:30:57.96:455,58,0	1/1:1,27:27:77.88:637,78,0	0/0:8,0:29:68.51:0,69,420	1/1:2,8:12:28.05:209,28,0
chr10	31513255	.	AGG	A	12369.73	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=3.568;DP=674;FS=2.305;HRun=11;HaplotypeScore=142.4386;InbreedingCoeff=0.9502;MQ=75.73;MQ0=0;MQRankSum=-2.985;QD=21.44;ReadPosRankSum=4.632;VQSLOD=3.1982;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:9,35:44:87.67:925,88,0	1/1:3,9:12:27.06:287,27,0	0/0:26,0:26:36.53:0,37,450	0/0:23,0:23:25:0,25,338	1/1:2,21:23:51.09:541,51,0	1/1:0,15:15:45.11:479,45,0	1/1:3,26:29:69.16:734,69,0	1/1:4,0:19:35.54:154,36,0	0/0:5,1:25:3.21:0,3,156	1/1:6,23:29:71.21:757,71,0	1/1:3,15:18:45.11:479,45,0	1/1:6,37:43:99:1117,105,0	1/1:3,16:19:45.08:467,45,0	1/1:1,24:25:60.15:638,60,0	0/0:19,0:22:53.06:0,53,648	1/1:5,20:25:60.11:638,60,0	1/1:4,27:31:54.12:575,54,0	1/1:3,24:27:63.13:670,63,0	1/1:2,0:19:35.54:167,36,0	1/1:3,0:22:49.39:216,49,0	1/1:2,0:30:54.51:236,55,0	1/1:1,23:24:54.13:574,54,0	1/1:1,12:13:36.07:373,36,0	1/1:4,22:26:57.14:607,57,0	1/1:4,22:26:63.15:670,63,0	1/1:9,16:25:51.01:513,51,0	1/1:1,0:18:46.59:203,47,0	1/1:3,12:15:33.08:351,33,0
chr10	31513265	.	GGA	G	3452.99	PASS	AB=0.995;AC=29;AF=0.518;AN=56;BaseQRankSum=14.510;DP=669;FS=0.000;HRun=0;HaplotypeScore=163.7249;InbreedingCoeff=0.3457;MQ=71.12;MQ0=0;MQRankSum=-1.632;QD=7.54;ReadPosRankSum=9.183;VQSLOD=2.3717;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:44,0:44:99:218,0,109	0/1:13,0:13:44.05:58,0,44	0/0:21,0:21:33.63:0,34,634	0/0:20,0:20:36.42:0,36,537	1/1:21,0:21:15.97:177,16,0	0/1:19,0:19:46.42:115,0,46	0/1:29,0:29:4.70:214,0,5	0/0:21,0:21:55.23:0,55,315	0/0:24,1:25:21.71:0,22,363	1/1:27,0:27:22.30:256,22,0	1/1:17,1:18:22.22:192,22,0	1/1:37,1:38:89.05:406,89,0	1/1:18,1:19:7.58:189,8,0	0/1:30,0:30:62.80:170,0,63	0/0:25,0:25:68.99:0,69,957	0/1:23,0:23:10.22:179,0,10	1/1:28,0:28:8.72:149,9,0	1/1:25,0:25:14.16:182,14,0	0/0:23,0:23:57.61:0,58,365	0/0:24,0:24:43.34:0,43,251	0/0:32,0:32:61.24:0,61,284	1/1:24,0:24:25.15:177,25,0	1/1:12,0:12:31.56:159,32,0	0/1:27,0:27:54.16:152,0,54	0/1:27,0:27:25:248,0,25	0/1:20,1:21:34.86:119,0,35	0/0:19,0:19:37.96:0,38,156	1/1:13,0:13:7.81:93,8,0
chr10	31513949	.	T	TA	22213.16	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-7.128;DP=780;FS=5.357;HRun=1;HaplotypeScore=76.7677;InbreedingCoeff=0.9996;MQ=82.93;MQ0=0;MQRankSum=-5.198;QD=40.24;ReadPosRankSum=6.563;VQSLOD=4.9425;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,63:63:99:2653,178,0	1/1:0,16:16:48.16:719,48,0	0/0:29,0:29:74.90:0,75,932	0/0:14,0:14:41.12:0,41,489	1/1:2,19:21:54.18:809,54,0	1/1:0,22:22:60.20:899,60,0	1/1:3,22:25:66.22:989,66,0	0/0:34,0:34:99:0,102,1313	1/1:2,32:34:81.27:1214,81,0	1/1:2,23:25:69.21:996,69,0	1/1:2,17:19:52.99:769,53,0	1/1:2,34:36:87.28:1273,87,0	1/1:0,24:24:69.23:1034,69,0	1/1:0,25:25:66.22:989,66,0	0/0:33,0:33:99:0,99,1270	1/1:3,34:37:99:1484,99,0	1/1:1,48:49:99:2044,138,0	1/1:1,24:25:66.22:989,66,0	0/0:20,0:20:57.17:0,57,715	0/0:26,0:26:75.23:0,75,959	0/0:37,0:37:99:0,108,1373	1/1:1,18:19:48.16:720,48,0	1/1:0,16:16:42.14:630,42,0	1/1:1,30:31:81.27:1214,81,0	1/1:0,26:26:72.24:1079,72,0	1/1:1,30:31:90.30:1349,90,0	0/0:35,0:33:99:0,102,1277	1/1:0,8:8:24.08:360,24,0
chr10	31514599	.	GA	G	9702.96	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=14.068;DP=596;FS=8.364;HRun=7;HaplotypeScore=59.1027;InbreedingCoeff=0.9959;MQ=74.53;MQ0=0;MQRankSum=-1.624;QD=26.01;ReadPosRankSum=5.384;VQSLOD=5.0918;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,17:20:48.10:488,48,0	1/1:0,10:10:30.07:306,30,0	0/0:20,0:20:34.58:0,35,358	0/0:9,0:8:18.04:0,18,198	1/1:3,23:26:66.14:672,66,0	1/1:1,27:28:72.16:735,72,0	1/1:1,12:13:36.08:367,36,0	0/0:36,0:36:99:0,99,1201	0/0:24,0:24:60.19:0,60,755	1/1:2,24:26:72.12:719,72,0	1/1:1,11:12:27.01:264,27,0	1/1:1,17:19:48.11:490,48,0	1/1:2,23:25:63.14:643,63,0	1/1:3,13:16:39.09:398,39,0	0/0:27,0:27:72.23:0,72,905	1/1:2,18:20:45.10:459,45,0	1/1:1,20:21:60.14:610,60,0	1/1:1,18:19:51.11:520,51,0	0/0:23,0:23:60.18:0,60,744	0/0:27,0:27:75.24:0,75,943	0/0:20,0:20:57.15:0,57,688	1/1:4,22:26:54.12:551,54,0	1/1:1,15:16:42.09:428,42,0	1/1:0,22:22:57.13:581,57,0	1/1:1,22:23:54.12:551,54,0	1/1:0,26:26:78.07:768,78,0	0/0:37,0:37:99:0,108,1333	1/1:0,5:5:15.03:153,15,0
chr10	31515185	.	AG	A	10208.44	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=8.541;DP=569;FS=7.746;HRun=5;HaplotypeScore=59.6597;InbreedingCoeff=0.9988;MQ=78.07;MQ0=1;MQRankSum=-3.547;QD=28.92;ReadPosRankSum=6.436;VQSLOD=4.5149;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,27:31:66.19:747,66,0	1/1:0,9:9:27.08:306,27,0	0/0:35,0:34:85.46:0,85,1108	0/0:27,0:25:68.88:0,69,845	1/1:0,18:18:51.15:578,51,0	1/1:0,25:25:69.20:782,69,0	1/1:2,20:22:48.14:544,48,0	0/0:25,0:29:63.18:0,63,823	0/0:20,0:20:57.19:0,57,778	1/1:0,20:20:57.16:646,57,0	1/1:0,19:19:54.08:584,54,0	1/1:0,18:18:51.15:578,51,0	1/1:3,15:18:42.12:475,42,0	1/1:3,16:19:42.12:476,42,0	0/0:20,0:20:57.15:0,57,745	1/1:1,16:17:39.11:442,39,0	1/1:1,31:32:84.24:952,84,0	1/1:0,17:17:39.11:442,39,0	0/0:17,0:17:48.16:0,48,654	0/0:25,0:25:72.24:0,72,983	0/0:13,0:13:39.11:0,39,515	1/1:1,8:9:24.07:272,24,0	1/1:2,12:14:33.09:374,33,0	1/1:1,8:9:21.06:238,21,0	1/1:0,17:17:42.12:476,42,0	1/1:0,26:26:78.22:884,78,0	0/0:30,0:30:87.29:0,87,1187	1/1:0,13:13:36.10:408,36,0
chr10	31519704	.	G	GA	20524.19	PASS	AB=0.547;AC=48;AF=0.857;AN=56;BaseQRankSum=-6.874;DP=639;FS=4.121;HRun=1;HaplotypeScore=74.5409;InbreedingCoeff=0.7099;MQ=64.64;MQ0=1;MQRankSum=-0.109;QD=37.66;ReadPosRankSum=5.040;VQSLOD=5.3773;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,28:28:69.23:1032,69,0	1/1:0,1:1:3.01:45,3,0	0/0:21,0:14:32.98:0,33,372	0/0:46,0:27:20.89:0,21,451	1/1:0,17:17:45.15:662,45,0	1/1:1,20:21:52.72:804,53,0	1/1:0,21:21:54.18:783,54,0	1/1:3,19:22:33.68:808,34,0	1/1:1,29:30:81.27:1201,81,0	1/1:0,19:19:50.53:709,51,0	1/1:0,16:16:48.16:701,48,0	1/1:0,32:32:93.31:1374,93,0	1/1:1,25:26:57.06:853,57,0	1/1:1,35:36:90.30:1342,90,0	0/0:27,0:27:81.23:0,81,1018	1/1:0,19:19:45.15:673,45,0	1/1:0,21:21:54.18:808,54,0	0/1:2,15:17:2.60:458,0,3	1/1:1,20:21:60.14:836,60,0	1/1:0,19:19:51.12:736,51,0	1/1:0,30:30:84.28:1258,84,0	1/1:1,25:26:66.22:986,66,0	1/1:0,18:18:42.14:626,42,0	1/1:2,30:32:75.11:1114,75,0	1/1:0,18:18:45.15:662,45,0	1/1:0,33:33:99:1455,99,0	1/1:1,11:12:27.09:392,27,0	0/1:2,7:9:20.70:206,0,21
chr10	31520180	.	T	TA	645.51	PASS	AB=1.000;AC=6;AF=0.107;AN=56;BaseQRankSum=-8.082;DP=586;FS=5.618;HRun=8;HaplotypeScore=99.5061;InbreedingCoeff=0.1741;MQ=69.81;MQ0=0;MQRankSum=0.575;QD=6.65;ReadPosRankSum=-4.519;VQSLOD=0.3533;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:32.18:0,32,134	0/0:7,0:7:18.77:0,19,88	0/0:10,0:8:6.16:0,6,65	0/0:9,0:9:5.44:0,5,46	0/0:33,0:33:50.61:0,51,293	0/0:27,0:27:59.65:0,60,225	0/0:24,0:24:4.79:0,5,130	0/0:26,0:26:1.18:0,1,115	1/1:1,22:23:57.16:655,57,0	0/0:18,0:18:8.86:0,9,86	0/1:13,0:13:6.94:7,0,63	0/0:35,0:35:19.30:0,19,214	0/0:33,0:33:65.94:0,66,258	0/0:26,0:26:62.76:0,63,247	0/0:22,0:22:60:0,60,537	0/0:21,0:21:48.25:0,48,178	0/0:18,0:18:33.81:0,34,133	0/0:19,0:19:44.95:0,45,181	0/0:18,0:18:36.56:0,37,126	0/0:29,0:29:68.52:0,69,336	0/0:18,0:18:44.36:0,44,173	0/0:11,0:11:6.51:0,7,87	0/1:21,0:21:52.19:52,0,91	0/0:25,0:25:8.77:0,9,158	0/0:22,0:22:37:0,37,164	0/0:24,0:24:25.18:0,25,167	0/1:32,0:31:47.85:48,0,181	0/1:8,0:8:5.47:5,0,49
chr10	31522015	.	TGCAC	T	4437.62	PASS	AB=0.787;AC=48;AF=0.889;AN=54;BaseQRankSum=4.488;DP=604;FS=1.977;HRun=0;HaplotypeScore=135.1968;InbreedingCoeff=0.5180;MQ=78.72;MQ0=12;MQRankSum=-6.045;QD=8.42;ReadPosRankSum=2.066;VQSLOD=4.3063;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:41,0:41:11.83:86,12,0	1/1:13,0:13:14.96:120,15,0	0/0:44,0:30:36.69:0,37,467	0/0:33,0:27:35.34:0,35,376	1/1:16,0:16:2.80:17,3,0	1/1:12,0:12:35.94:295,36,0	1/1:1,32:33:11.85:142,12,0	1/1:22,0:21:53.96:475,54,0	1/1:24,0:24:21.07:262,21,0	1/1:24,0:24:47.81:406,48,0	1/1:8,0:8:8.99:75,9,0	1/1:22,0:22:14.78:127,15,0	1/1:24,0:24:26.96:295,27,0	1/1:27,0:27:11.73:70,12,0	0/1:24,0:24:4.39:4,0,216	1/1:23,0:22:53.83:474,54,0	1/1:24,0:23:5.88:36,6,0	1/1:17,0:17:47.63:350,48,0	1/1:15,0:14:6.38:334,6,0	1/1:14,0:13:20.77:160,21,0	0/1:9,26:35:5.62:70,0,6	1/1:20,0:20:11.78:79,12,0	1/1:15,0:15:8.99:75,9,0	1/1:29,0:29:8.86:70,9,0	1/1:14,0:14:8.83:54,9,0	1/1:15,0:14:32.88:266,33,0	1/1:4,12:16:6.90:95,7,0	./.
chr10	31522016	.	GCACGCACACACACACACACA	G	8609.08	PASS	AB=0.883;AC=36;AF=0.643;AN=56;BaseQRankSum=0.465;DP=600;FS=5.440;HRun=0;HaplotypeScore=215.4258;InbreedingCoeff=0.5401;MQ=78.55;MQ0=12;MQRankSum=-3.330;QD=21.91;ReadPosRankSum=0.736;VQSLOD=3.3229;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:1,39:41:12.04:521,12,0	0/1:13,0:13:30.90:31,0,155	0/0:43,0:29:36.70:0,37,467	0/0:33,0:27:35.43:0,35,412	1/1:0,15:16:2.57:126,3,0	0/1:12,0:12:99:134,0,783	0/0:32,0:33:12.04:0,12,562	1/1:22,0:21:18.50:413,19,0	0/0:2,0:24:20.53:0,21,277	1/1:0,21:22:53.80:864,54,0	1/1:8,0:8:8.99:75,9,0	1/1:0,22:22:14.59:734,15,0	1/1:1,22:23:27.09:1456,27,0	1/1:1,26:27:12.04:494,12,0	0/0:24,0:24:53.72:0,54,1312	1/1:18,5:22:17.53:1154,18,0	1/1:1,22:23:5.95:143,6,0	1/1:17,0:17:47.63:350,48,0	0/1:15,0:14:99:197,0,679	1/1:14,0:13:3.82:120,4,0	0/0:34,0:34:8.87:0,9,552	1/1:2,3:20:15.01:528,15,0	1/1:15,0:15:8.99:75,9,0	1/1:2,26:29:12.04:416,12,0	1/1:0,14:14:9.03:392,9,0	0/1:2,14:15:38.65:386,0,39	0/0:14,0:15:12.93:0,13,710	0/0:1,0:1:3.01:0,3,99
chr10	31522020	.	GCACACACA	G	2051.19	PASS	AB=1.000;AC=27;AF=0.614;AN=44;BaseQRankSum=6.481;DP=606;FS=0.799;HRun=0;HaplotypeScore=163.6649;InbreedingCoeff=0.6493;MQ=70.93;MQ0=14;MQRankSum=-5.791;QD=6.41;ReadPosRankSum=4.679;VQSLOD=2.5395;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:42,0:42:10.73:93,11,0	0/0:13,0:13:3.01:0,3,82	./.	./.	1/1:17,0:16:2.49:15,2,0	0/0:18,0:18:24.50:0,24,496	0/0:36,0:36:17.26:0,17,252	0/0:19,0:18:3.01:0,3,43	1/1:23,0:23:21.07:378,21,0	1/1:22,0:22:9.03:167,9,0	./.	1/1:22,0:22:14.37:174,14,0	1/1:22,0:22:27.04:447,27,0	1/1:26,0:26:9.02:47,9,0	1/1:15,8:23:18.53:404,19,0	1/1:23,0:22:12.04:220,12,0	1/1:24,0:23:2.80:13,3,0	./.	0/0:20,0:19:18.53:0,19,413	./.	0/0:41,0:41:21.07:0,21,519	1/1:18,0:18:10.34:82,10,0	./.	1/1:27,0:27:6.93:69,7,0	1/1:15,0:15:8.87:56,9,0	0/1:16,0:15:22.41:50,0,22	0/0:18,0:18:6.71:0,7,232	0/0:1,0:1:3.01:0,3,55
chr10	31522267	.	A	AG	18366.67	PASS	AB=0.643;AC=49;AF=0.875;AN=56;BaseQRankSum=11.619;DP=742;FS=7.833;HRun=3;HaplotypeScore=249.6308;InbreedingCoeff=0.8362;MQ=56.76;MQ0=8;MQRankSum=-7.881;QD=29.96;ReadPosRankSum=3.567;VQSLOD=2.7381;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,37:40:99:1318,105,0	1/1:6,7:13:29.90:384,30,0	0/0:48,0:29:61.13:0,61,658	0/0:34,0:24:58.62:0,59,611	1/1:6,15:20:33.05:402,33,0	1/1:1,16:16:45.14:599,45,0	1/1:4,17:22:62.34:739,62,0	1/1:19,1:26:62.52:617,63,0	1/1:8,22:29:51.43:857,51,0	1/1:10,16:25:63.10:786,63,0	1/1:4,12:16:38.84:491,39,0	1/1:11,26:37:99:1212,99,0	1/1:4,38:42:99:1491,114,0	1/1:6,19:25:57.11:737,57,0	0/0:47,0:47:99:0,132,1553	1/1:4,25:29:81.26:1067,81,0	1/1:8,25:32:75.19:919,75,0	1/1:4,17:21:51.16:670,51,0	0/1:4,0:8:14.60:199,0,15	1/1:7,0:20:47.98:585,48,0	1/1:12,0:18:23.88:229,24,0	1/1:5,29:34:78.23:999,78,0	1/1:4,9:13:30.09:385,30,0	1/1:5,32:36:79.35:1027,79,0	1/1:7,23:30:81.18:1003,81,0	1/1:5,23:28:75.16:970,75,0	1/1:7,0:16:41.61:497,42,0	1/1:3,3:6:15.04:185,15,0
chr10	31522270	.	GAAGGA	G	7785.71	PASS	AB=0.873;AC=36;AF=0.643;AN=56;BaseQRankSum=3.221;DP=726;FS=7.504;HRun=0;HaplotypeScore=327.0446;InbreedingCoeff=-0.1008;MQ=57.64;MQ0=8;MQRankSum=1.720;QD=13.06;ReadPosRankSum=1.122;VQSLOD=2.7073;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:38,0:40:11.01:469,11,0	1/1:7,1:11:16.04:218,16,0	0/0:48,0:28:44.63:0,45,1385	0/0:35,0:23:59.79:0,60,1457	0/1:16,2:19:4.68:191,0,5	1/1:17,0:17:22.70:152,23,0	0/1:18,2:23:55.82:368,0,56	0/1:21,6:26:46.76:573,0,47	0/1:23,3:26:26.05:347,0,26	0/1:21,2:27:60.10:335,0,60	1/1:14,2:16:10.95:232,11,0	0/1:30,1:36:76.67:419,0,77	0/1:39,1:41:17.03:479,0,17	1/1:19,1:21:3.22:361,3,0	0/0:47,0:47:99:0,138,4188	1/1:24,1:28:9.55:349,10,0	1/1:25,2:30:41.94:652,42,0	1/1:18,1:20:34.23:287,34,0	0/1:8,1:8:58.81:59,0,60	0/1:18,2:20:95.63:96,0,128	0/1:13,1:14:25.79:197,0,26	0/1:31,2:35:99:305,0,139	0/1:10,2:12:7.22:171,0,7	1/1:35,0:35:33.26:531,33,0	1/1:27,1:32:48.82:604,49,0	0/1:26,0:27:24.22:184,0,24	0/1:15,1:16:38.34:55,0,38	1/1:3,0:5:11.66:152,12,0
chr10	31522272	.	AG	A	1400.37	PASS	AB=0.625;AC=9;AF=0.161;AN=56;BaseQRankSum=-2.952;DP=731;FS=7.496;HRun=2;HaplotypeScore=313.4687;InbreedingCoeff=0.8480;MQ=56.86;MQ0=8;MQRankSum=-7.335;QD=15.06;ReadPosRankSum=-6.017;VQSLOD=0.1804;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:91.23:0,91,470	0/0:12,0:12:11.31:0,11,60	0/0:46,1:28:28.82:0,29,707	0/0:34,0:22:53.73:0,54,710	0/0:20,0:19:32.16:0,32,159	0/0:18,0:17:35.84:0,36,164	0/0:23,0:23:25.24:0,25,175	1/1:11,16:26:59.24:532,59,0	0/0:27,0:26:59.59:0,60,302	0/0:28,0:27:49.79:0,50,297	0/0:15,0:15:18.64:0,19,114	0/0:36,0:36:82.07:0,82,418	0/0:41,0:41:88.25:0,88,446	0/0:21,0:21:29.13:0,29,208	0/0:46,0:46:99:0,132,1951	0/0:29,0:29:62.31:0,62,321	0/0:31,0:30:28.17:0,28,177	0/0:20,0:20:36.37:0,36,184	0/1:4,6:9:24.03:136,0,24	1/1:3,17:20:57.56:407,58,0	1/1:9,10:17:13.50:106,13,0	0/0:36,0:36:71.50:0,72,387	0/0:12,0:12:24.19:0,24,136	0/0:36,0:35:64.39:0,64,321	0/0:31,0:31:48.95:0,49,258	0/0:26,0:26:58.22:0,58,288	1/1:3,14:16:39.94:383,40,0	0/0:6,0:6:16.23:0,16,74
chr10	31522363	.	G	GGAGGAA	28889.91	PASS	AB=0.848;AC=46;AF=0.821;AN=56;BaseQRankSum=0.147;DP=664;FS=11.636;HRun=0;HaplotypeScore=269.1869;InbreedingCoeff=0.5355;MQ=60.44;MQ0=6;MQRankSum=-7.793;QD=53.40;ReadPosRankSum=0.460;VQSLOD=3.0783;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,9:20:27.64:926,28,0	1/1:5,14:19:54.03:1498,54,0	0/0:42,0:18:17.58:0,18,306	0/0:49,0:26:24.66:0,25,276	1/1:11,14:26:50.79:1025,51,0	1/1:5,7:12:27.02:744,27,0	1/1:23,4:26:41.07:686,41,0	1/1:13,12:20:36.08:957,36,0	1/1:10,15:25:60.12:1847,60,0	1/1:12,10:22:48.06:1275,48,0	1/1:10,5:15:29.95:655,30,0	1/1:13,17:30:65.55:1822,66,0	1/1:13,21:37:81.19:2567,81,0	1/1:15,21:37:70.63:2377,71,0	0/0:30,0:29:69.23:0,69,1488	1/1:7,21:27:78.09:2245,78,0	1/1:10,6:15:15.27:576,15,0	0/1:5,1:6:42.36:94,0,42	0/1:15,4:19:3.05:641,0,3	1/1:11,9:20:45.08:923,45,0	0/1:14,0:14:37.26:70,0,37	1/1:10,13:23:45.04:1287,45,0	1/1:7,11:18:38.96:992,39,0	0/1:10,7:16:20.39:313,0,20	1/1:9,18:27:54.96:1945,55,0	1/1:15,14:29:68.92:1656,69,0	1/1:11,6:17:41.97:1107,42,0	1/1:3,6:9:24.03:664,24,0
chr10	31522369	.	AGAATAGGAG	A	9102.22	PASS	AB=0.990;AC=27;AF=0.482;AN=56;BaseQRankSum=-5.012;DP=606;FS=2.074;HRun=0;HaplotypeScore=331.2961;InbreedingCoeff=-0.6451;MQ=60.17;MQ0=5;MQRankSum=-4.056;QD=18.31;ReadPosRankSum=7.404;VQSLOD=2.8077;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:17,0:17:99:218,0,175	0/1:18,0:18:99:464,0,198	0/0:37,0:13:23.19:0,23,462	0/0:46,0:24:37.07:0,37,488	0/1:26,0:26:99:262,0,335	0/1:11,0:11:62.56:63,0,159	0/1:22,0:21:99:159,0,387	0/1:20,0:15:99:209,0,105	0/1:23,1:23:99:652,0,144	0/1:22,0:21:99:261,0,360	0/1:17,0:17:99:262,0,269	0/1:25,0:25:99:479,0,230	0/1:37,0:37:99:618,0,183	0/1:37,0:37:99:691,0,385	0/0:25,0:24:72.25:0,72,2930	0/1:28,0:27:99:454,0,456	0/1:14,0:13:92.52:93,0,235	0/1:4,0:4:30.28:30,0,46	0/1:16,2:18:99:523,0,268	1/1:10,7:17:45.62:832,46,0	0/1:9,1:10:34.62:68,0,35	0/1:19,0:19:99:408,0,193	0/1:18,0:18:99:250,0,175	0/1:13,0:12:75.07:75,0,83	0/1:28,0:28:99:666,0,292	0/1:27,0:27:99:305,0,868	1/1:9,7:15:42.14:873,42,0	0/1:9,0:9:29.84:188,0,30
chr10	31522388	.	GAGA	G	12349.99	PASS	AB=0.824;AC=43;AF=0.768;AN=56;BaseQRankSum=2.501;DP=514;FS=11.928;HRun=0;HaplotypeScore=260.5235;InbreedingCoeff=0.3330;MQ=51.01;MQ0=7;MQRankSum=-4.395;QD=28.99;ReadPosRankSum=3.288;VQSLOD=3.6773;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,9:13:33.45:425,33,0	1/1:6,7:13:36.08:523,36,0	0/0:30,0:7:10.54:0,11,195	0/0:38,0:20:17.28:0,17,389	1/1:5,24:29:53.90:685,54,0	1/1:2,8:10:29.98:391,30,0	0/1:7,15:21:39.60:513,0,40	0/1:12,0:9:7.46:7,0,57	1/1:11,7:17:46.99:540,47,0	1/1:3,12:15:45.06:660,45,0	1/1:3,11:14:30.98:459,31,0	1/1:7,14:21:60.23:732,60,0	1/1:12,17:29:80.64:1070,81,0	1/1:12,18:30:75.14:961,75,0	0/0:20,0:19:57.16:0,57,1212	1/1:4,22:26:72.11:1105,72,0	0/1:3,9:11:55.86:282,0,56	0/1:1,2:3:34.27:92,0,34	1/1:15,0:15:13.27:97,13,0	0/1:15,0:15:9.16:9,0,32	0/1:7,0:6:10.48:10,0,24	1/1:4,16:20:57.88:716,58,0	1/1:7,12:19:42.61:629,43,0	1/1:1,10:11:19.12:299,19,0	1/1:9,15:25:63.23:807,63,0	1/1:3,20:23:66.18:1060,66,0	0/1:14,0:15:13.42:13,0,40	1/1:2,4:6:18.03:263,18,0
chr10	31522410	.	ATGG	A	7443.72	PASS	AB=0.979;AC=46;AF=0.821;AN=56;BaseQRankSum=6.326;DP=490;FS=11.461;HRun=0;HaplotypeScore=251.5118;InbreedingCoeff=0.5397;MQ=42.30;MQ0=18;MQRankSum=-4.736;QD=18.07;ReadPosRankSum=0.951;VQSLOD=2.7278;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:14:22.83:184,23,0	1/1:12,0:11:25.66:271,26,0	0/0:27,1:4:6.02:0,6,112	0/0:30,0:17:22.83:0,23,536	1/1:30,0:30:59.41:427,59,0	1/1:12,0:11:20.29:193,20,0	1/1:23,2:24:45.51:472,46,0	0/1:13,0:11:43.03:43,0,102	1/1:11,1:11:27.04:275,27,0	1/1:19,0:19:41.53:401,42,0	1/1:11,0:11:32.20:292,32,0	1/1:19,0:20:44.54:449,45,0	1/1:16,0:16:48.04:502,48,0	1/1:22,0:21:48.23:490,48,0	0/0:19,0:19:56.97:0,57,1165	1/1:28,0:24:68.58:706,69,0	1/1:15,0:13:24.54:199,25,0	1/1:4,1:4:9.48:112,9,0	0/1:10,0:9:20.25:56,0,20	1/1:18,0:18:17.12:101,17,0	0/1:9,0:6:1.06:1,0,6	1/1:22,0:22:49.37:387,49,0	1/1:18,0:18:43.66:401,44,0	1/1:12,0:12:31.05:232,31,0	1/1:19,1:20:43.46:402,43,0	1/1:27,0:27:59.84:663,60,0	0/1:16,0:15:12.76:43,0,13	1/1:3,1:4:12.03:142,12,0
chr10	31522420	.	AGAGGAG	A	14085.86	PASS	AB=0.842;AC=49;AF=0.875;AN=56;BaseQRankSum=4.818;DP=542;FS=24.427;HRun=0;HaplotypeScore=250.7450;InbreedingCoeff=0.7552;MQ=38.32;MQ0=22;MQRankSum=-5.566;QD=31.58;ReadPosRankSum=2.254;VQSLOD=3.3014;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,5:17:23.95:381,24,0	1/1:6,6:11:18.06:374,18,0	0/0:39,0:5:6.02:0,6,87	0/0:35,0:18:18.03:0,18,396	1/1:11,20:31:59.90:1084,60,0	1/1:10,5:14:30.08:486,30,0	1/1:20,6:25:9.36:457,9,0	0/1:13,3:14:1.52:200,0,2	1/1:9,4:12:17.98:297,18,0	1/1:10,11:21:54.12:953,54,0	1/1:5,6:11:18.06:360,18,0	1/1:11,12:23:9.83:902,10,0	1/1:10,7:17:30:527,30,0	1/1:13,12:24:48.14:850,48,0	0/0:22,0:21:50.99:0,51,1543	1/1:17,11:24:39.08:717,39,0	1/1:12,4:14:16.61:268,17,0	1/1:3,2:4:9:150,9,0	1/1:5,11:14:29.99:454,30,0	1/1:2,17:19:45.10:848,45,0	1/1:10,1:8:8.97:110,9,0	1/1:9,14:23:47.97:881,48,0	1/1:6,11:17:39.03:702,39,0	1/1:9,4:13:18.75:324,19,0	1/1:10,12:22:45.09:864,45,0	1/1:12,17:29:60.89:1193,61,0	1/1:5,12:16:27.09:575,27,0	1/1:1,2:3:6.02:128,6,0
chr10	31523416	.	A	ATATGTG	2101.21	PASS	AB=1.000;AC=32;AF=0.842;AN=38;BaseQRankSum=-1.275;DP=138;FS=13.183;HRun=0;HaplotypeScore=39.1198;InbreedingCoeff=0.3187;MQ=40.56;MQ0=5;MQRankSum=-1.506;QD=19.46;ReadPosRankSum=-0.850;VQSLOD=1.1034;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:8,0:7:4.33:4,0,17	./.	./.	./.	1/1:6,0:6:5.31:74,5,0	0/0:8,0:8:17.25:0,17,220	1/1:3,0:1:0.89:2,1,0	1/1:8,0:7:3.84:23,4,0	./.	1/1:5,0:5:12:239,12,0	./.	0/1:3,0:3:42.03:45,0,42	1/1:7,0:7:18.06:280,18,0	1/1:0,2:3:3.01:99,3,0	./.	./.	1/1:15,0:16:24.34:267,24,0	1/1:14,1:18:41.33:652,41,0	1/1:1,0:1:0.47:1,0,0	./.	0/0:1,0:1:3.01:0,3,44	./.	1/1:4,0:4:3.01:50,3,0	1/1:2,0:2:2.99:23,3,0	1/1:6,0:6:8.99:74,9,0	1/1:6,0:6:14.78:237,15,0	1/1:2,0:2:3.01:38,3,0	1/1:10,0:8:6.02:109,6,0
chr10	31523418	.	A	ATGTG	800.35	PASS	AB=0.964;AC=22;AF=0.524;AN=42;BaseQRankSum=0.922;DP=142;FS=0.000;HRun=0;HaplotypeScore=41.9266;InbreedingCoeff=0.2177;MQ=40.51;MQ0=5;MQRankSum=-1.503;QD=8.42;ReadPosRankSum=2.050;VQSLOD=1.0316;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:10,0:9:16.96:42,0,17	./.	./.	./.	1/1:6,0:6:0.96:2,1,0	0/0:9,0:9:8.95:0,9,205	1/1:3,0:1:3.01:36,3,0	1/1:6,0:5:1.90:5,2,0	./.	1/1:5,0:5:9.46:112,9,0	0/0:5,0:3:3:0,3,25	0/0:3,0:3:1.31:0,1,44	1/1:6,0:7:12.45:83,12,0	1/1:3,0:3:3.01:52,3,0	./.	./.	1/1:16,0:16:8.73:84,9,0	0/1:19,0:19:32.93:321,0,33	0/0:1,0:1:0:0,0,0	./.	0/0:1,0:1:3.01:0,3,40	0/0:4,0:4:3:0,3,25	0/0:4,0:4:1.64:0,2,22	0/1:2,0:2:0:0,0,0	0/0:4,1:6:0.93:0,1,2	0/1:5,1:6:26.14:102,0,26	1/1:2,0:2:3.01:38,3,0	1/1:4,4:8:3.90:44,4,0
chr10	31523420	.	A	ATGTG	472.25	PASS	AB=0.964;AC=14;AF=0.333;AN=42;BaseQRankSum=2.443;DP=144;FS=1.489;HRun=0;HaplotypeScore=42.8792;InbreedingCoeff=-0.1763;MQ=40.24;MQ0=5;MQRankSum=-2.309;QD=5.37;ReadPosRankSum=3.199;VQSLOD=1.4409;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:8:2.31:0,2,15	./.	./.	./.	0/0:6,0:6:6.01:0,6,74	0/1:9,0:9:31.83:32,0,173	1/1:3,0:1:3.01:36,3,0	0/1:7,0:6:17.62:18,0,101	./.	0/1:5,0:5:23.83:24,0,36	0/0:5,0:3:3.01:0,3,49	0/0:3,0:3:5.66:0,6,74	0/1:7,0:7:46.70:47,0,75	1/1:3,0:3:2.99:24,3,0	./.	./.	0/1:14,3:17:99:119,0,192	0/1:18,1:19:99:169,0,197	0/0:1,0:1:2.98:0,3,21	./.	0/0:1,0:1:3.01:0,3,39	0/0:5,0:5:9:0,9,99	0/0:4,0:4:6.01:0,6,77	0/0:3,0:3:2.61:0,3,44	0/0:5,0:5:9.03:0,9,140	0/1:6,0:6:26.87:27,0,122	1/1:2,0:2:3.01:38,3,0	0/1:9,1:8:23.88:66,0,24
chr10	31523569	.	G	GT	11377.04	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-3.505;DP=378;FS=11.238;HRun=7;HaplotypeScore=40.1446;InbreedingCoeff=0.9291;MQ=74.70;MQ0=0;MQRankSum=-3.118;QD=32.60;ReadPosRankSum=1.610;VQSLOD=3.9644;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,31:32:85.50:1017,86,0	1/1:0,3:3:9.03:109,9,0	0/0:9,0:8:9:0,9,87	0/0:9,0:9:24.01:0,24,222	1/1:0,9:9:24.07:290,24,0	1/1:1,18:19:54.12:636,54,0	1/1:1,12:13:33.10:399,33,0	1/1:3,19:23:60.02:689,60,0	1/1:1,14:15:36.11:435,36,0	1/1:0,13:13:39.12:471,39,0	1/1:0,11:11:33.10:398,33,0	1/1:0,11:11:27.08:326,27,0	1/1:0,17:17:51.16:616,51,0	1/1:2,11:14:36.11:433,36,0	0/0:11,0:11:30.05:0,30,290	1/1:0,13:13:36.11:435,36,0	1/1:0,28:28:72.22:870,72,0	1/1:0,20:20:51.16:616,51,0	1/1:1,10:11:30.08:350,30,0	1/1:0,12:12:36.11:435,36,0	1/1:0,7:7:18.06:217,18,0	1/1:0,6:6:18.06:217,18,0	1/1:0,3:3:9.03:109,9,0	1/1:0,21:21:60.18:725,60,0	1/1:0,15:15:42.13:507,42,0	1/1:0,9:9:27.08:326,27,0	1/1:1,15:16:42.13:507,42,0	1/1:1,7:8:21.06:244,21,0
chr10	31524565	.	G	GC	15550.93	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-8.432;DP=559;FS=8.129;HRun=6;HaplotypeScore=51.7697;InbreedingCoeff=0.9551;MQ=84.24;MQ0=0;MQRankSum=-7.397;QD=30.79;ReadPosRankSum=2.487;VQSLOD=5.3171;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,26:29:63.20:793,63,0	1/1:3,13:16:39.07:469,39,0	0/0:14,0:14:35.99:0,36,339	0/0:20,0:20:30.10:0,30,380	1/1:3,13:16:36.12:453,36,0	1/1:1,16:17:45.14:565,45,0	1/1:4,31:35:78.25:980,78,0	1/1:3,11:14:27.04:306,27,0	1/1:1,30:31:84.27:1053,84,0	1/1:1,11:12:36.11:446,36,0	1/1:0,4:4:6.02:75,6,0	1/1:2,24:26:72.23:903,72,0	1/1:2,23:25:63.20:789,63,0	1/1:2,27:29:78.25:980,78,0	0/0:20,0:20:54.12:0,54,551	1/1:1,20:21:57.18:717,57,0	1/1:2,17:19:20.71:469,21,0	1/1:2,34:36:99:1245,99,0	1/1:2,12:14:36.11:451,36,0	1/1:5,7:12:18.06:222,18,0	1/1:1,33:34:81.25:1014,81,0	1/1:2,10:12:27.09:339,27,0	1/1:4,8:12:24.08:302,24,0	1/1:2,25:27:66.21:830,66,0	1/1:1,17:18:48.15:604,48,0	1/1:3,16:19:48.15:602,48,0	1/1:1,20:21:57.18:717,57,0	1/1:0,6:6:18.06:226,18,0
chr10	31525879	.	A	AT	19946.18	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-14.590;DP=697;FS=7.469;HRun=1;HaplotypeScore=63.1372;InbreedingCoeff=0.9975;MQ=82.80;MQ0=0;MQRankSum=-4.272;QD=41.38;ReadPosRankSum=3.802;VQSLOD=5.2700;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,44:44:99:1888,126,0	1/1:0,5:5:15.05:225,15,0	0/0:20,0:20:54.16:0,54,662	0/0:20,0:20:54.14:0,54,665	1/1:0,32:32:90.21:1282,90,0	1/1:0,23:23:63.21:944,63,0	1/1:2,23:25:66.18:964,66,0	0/0:31,0:31:93.29:0,93,1183	0/0:26,0:26:78.25:0,78,1006	1/1:1,19:20:54.17:790,54,0	1/1:0,25:25:72.24:1079,72,0	1/1:0,17:17:51.17:764,51,0	1/1:0,32:32:84.28:1252,84,0	1/1:0,33:33:93.32:1393,93,0	0/0:36,0:36:99:0,102,1324	1/1:1,34:35:96.33:1439,96,0	1/1:2,25:27:69.23:1034,69,0	1/1:0,18:18:54.18:809,54,0	0/0:18,0:18:54.18:0,54,701	0/0:15,0:15:45.13:0,45,570	0/0:24,0:24:72.23:0,72,933	1/1:1,31:32:84.20:1231,84,0	1/1:1,20:21:60.20:899,60,0	1/1:0,28:28:72.24:1079,72,0	1/1:0,14:14:42.14:630,42,0	1/1:0,39:39:99:1752,117,0	0/0:25,0:25:72.23:0,72,934	1/1:0,12:12:33.11:494,33,0
chr10	31526103	.	T	TAC	533.70	PASS	AB=0.984;AC=10;AF=0.192;AN=52;BaseQRankSum=-4.561;DP=471;FS=41.164;HRun=0;HaplotypeScore=91.5712;InbreedingCoeff=-0.0838;MQ=60.96;MQ0=12;MQRankSum=0.955;QD=2.77;ReadPosRankSum=1.252;VQSLOD=0.2289;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:23:8.36:8,0,48	0/0:4,0:4:4.35:0,4,17	./.	./.	0/0:25,0:25:23.22:0,23,125	0/1:17,2:18:11.70:92,0,12	0/1:32,0:32:22.65:110,0,23	0/0:22,0:22:5.27:0,5,21	0/0:14,0:14:8.76:0,9,98	0/0:9,0:9:12.26:0,12,71	0/0:13,0:13:5.90:0,6,41	0/1:26,1:26:51.72:52,0,58	0/1:13,0:13:14.86:19,0,15	0/0:22,0:21:14.41:0,14,60	0/0:12,0:12:9:0,9,90	0/0:22,0:22:23.22:0,23,125	0/1:22,0:22:3:3,0,58	1/1:8,14:19:7.92:336,8,0	0/0:8,0:8:2.84:0,3,14	0/0:11,0:13:2.63:0,3,14	0/0:18,0:19:2.84:0,3,14	0/0:9,0:8:11.58:0,12,62	0/0:12,0:12:8.82:0,9,59	0/1:24,0:24:34.25:34,0,159	0/1:11,0:11:10.14:10,0,24	0/0:16,0:16:11.58:0,12,65	0/0:9,0:11:5.53:0,6,27	0/0:7,0:7:5.81:0,6,31
chr10	31526144	.	ACG	A	3762.09	PASS	AB=0.930;AC=29;AF=0.518;AN=56;BaseQRankSum=-8.320;DP=517;FS=11.749;HRun=0;HaplotypeScore=95.7599;InbreedingCoeff=0.4973;MQ=65.90;MQ0=9;MQRankSum=-1.981;QD=11.26;ReadPosRankSum=2.253;VQSLOD=2.4176;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:1,24:25:3.45:161,0,3	0/1:7,0:7:4.44:4,0,24	0/0:30,0:19:46.99:0,47,455	0/0:31,0:19:56.31:0,56,539	1/1:3,25:28:24.08:353,24,0	0/0:22,0:22:22.16:0,22,121	0/1:30,0:30:12.72:13,0,83	0/0:19,0:19:53.58:0,54,423	0/0:12,0:12:24.02:0,24,290	1/1:13,1:13:21.47:298,21,0	1/1:3,10:13:6.02:77,6,0	0/1:26,0:25:7.16:298,0,7	0/1:15,0:15:10.60:152,0,11	1/1:14,3:16:38.98:418,39,0	0/0:8,0:8:14.99:0,15,213	1/1:1,17:18:24.08:353,24,0	1/1:3,20:23:17.95:236,18,0	0/1:23,0:22:2.20:140,0,2	0/0:14,0:14:34.34:0,34,253	0/0:13,0:13:23.01:0,23,191	0/0:14,0:14:9.44:0,9,107	1/1:3,15:18:12.04:176,12,0	1/1:15,0:15:0.07:160,0,0	0/1:20,0:20:94.38:94,0,179	1/1:13,1:14:5.15:198,5,0	1/1:19,1:20:53.99:523,54,0	0/0:20,0:20:42.03:0,42,289	1/1:1,7:8:8.98:107,9,0
chr10	31526146	.	G	GTA	660.47	PASS	AB=0.908;AC=9;AF=0.161;AN=56;BaseQRankSum=-1.799;DP=498;FS=10.496;HRun=0;HaplotypeScore=109.1498;InbreedingCoeff=0.2298;MQ=66.52;MQ0=8;MQRankSum=-0.213;QD=5.28;ReadPosRankSum=-0.410;VQSLOD=1.9804;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:12.92:0,13,56	1/1:0,7:7:9.03:182,9,0	0/0:30,0:19:54.03:0,54,782	0/0:31,0:19:57.19:0,57,879	0/0:26,0:26:17.16:0,17,63	0/1:7,17:24:36.26:213,0,36	1/1:7,17:26:4.43:208,4,0	0/0:20,0:20:52.86:0,53,387	0/0:12,0:12:29.44:0,29,264	0/1:13,0:12:12.75:13,0,137	0/0:12,0:12:5.47:0,5,30	0/0:25,0:24:14.13:0,14,338	0/0:12,0:12:32.34:0,32,229	0/0:14,0:13:36.17:0,36,210	0/0:6,0:6:15.05:0,15,244	0/0:18,0:18:19.96:0,20,74	0/1:20,0:21:21.35:42,0,21	0/1:18,0:18:99:108,0,117	0/0:15,0:15:38.17:0,38,265	0/0:13,0:13:26.80:0,27,199	0/0:15,0:15:20.90:0,21,168	0/1:16,0:16:17.34:34,0,17	0/0:17,0:17:8.34:0,8,200	0/0:20,0:20:50.71:0,51,392	0/0:12,0:12:26.32:0,26,179	0/0:18,0:18:52.03:0,52,312	0/0:22,0:22:45.61:0,46,337	0/0:10,0:10:7.95:0,8,37
chr10	31526147	.	CGT	C	832.27	PASS	AB=0.956;AC=21;AF=0.375;AN=56;BaseQRankSum=-1.339;DP=496;FS=1.308;HRun=0;HaplotypeScore=102.4629;InbreedingCoeff=0.5185;MQ=67.57;MQ0=8;MQRankSum=-1.138;QD=3.53;ReadPosRankSum=3.330;VQSLOD=2.3874;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:25:11.88:81,12,0	0/0:7,0:7:8.61:0,9,93	0/0:30,0:19:51.95:0,52,872	0/0:32,0:20:60.17:0,60,1014	1/1:26,0:26:23.70:162,24,0	0/0:24,0:24:17.04:0,17,191	0/1:24,2:26:22.80:23,0,199	0/0:20,0:20:57.18:0,57,889	0/0:12,0:12:24.08:0,24,429	0/1:12,1:12:23.83:91,0,24	0/1:11,1:12:16.02:59,0,16	0/1:24,0:23:6.03:6,0,119	0/0:11,0:11:5.42:0,5,55	1/1:14,0:13:20.62:143,21,0	0/0:5,0:5:15.05:0,15,277	1/1:18,0:18:1.70:134,2,0	1/1:21,0:21:12.56:97,13,0	0/0:19,0:19:27.42:0,27,241	0/0:15,0:15:36.01:0,36,497	0/0:13,0:13:27.02:0,27,406	0/0:15,0:15:20.99:0,21,301	1/1:16,0:16:11.86:82,12,0	0/0:17,0:17:18.05:0,18,161	0/0:18,0:18:32.34:0,32,393	1/1:13,0:13:1.60:18,2,0	1/1:17,1:18:14.89:98,15,0	0/0:22,0:22:53.88:0,54,701	0/1:10,0:10:30.04:30,0,32
chr10	31529015	.	G	GAC	10410.06	PASS	AB=0.625;AC=31;AF=0.554;AN=56;BaseQRankSum=-10.225;DP=792;FS=0.463;HRun=0;HaplotypeScore=101.0173;InbreedingCoeff=-0.1548;MQ=59.54;MQ0=14;MQRankSum=0.708;QD=14.68;ReadPosRankSum=-0.359;VQSLOD=4.5688;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:21,27:49:99:433,0,105	0/0:0,0:6:11.36:0,11,56	1/1:30,0:19:2.68:11,3,0	0/1:33,0:12:0:0,0,0	0/1:6,10:16:19.58:172,0,20	0/0:12,0:21:14.20:0,14,70	0/0:9,0:25:16.84:0,17,83	1/1:15,13:27:42:517,42,0	1/1:27,0:27:26.52:207,27,0	0/1:5,17:25:0.39:567,0,0	0/1:11,12:23:74.09:298,0,74	0/1:8,22:32:61.38:637,0,61	0/1:6,23:30:4.62:694,0,5	0/1:14,21:35:99:380,0,111	0/0:28,0:31:68.87:0,69,758	0/1:8,20:29:59.15:517,0,59	1/1:9,32:42:64.57:987,65,0	0/1:9,14:24:32.07:432,0,32	1/1:16,8:23:26.93:343,27,0	0/1:4,13:17:7.73:347,0,8	0/1:16,33:49:30.39:476,0,30	0/1:12,16:28:80.22:210,0,80	0/1:2,12:14:13.66:260,0,14	0/1:19,34:52:34.06:1026,0,34	0/1:15,17:32:65.38:470,0,65	1/1:10,12:23:36.07:501,36,0	0/1:9,24:32:40.81:702,0,41	1/1:2,5:7:15.05:223,15,0
chr10	31529039	.	C	CACACACACAT	1265.10	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-2.262;DP=814;FS=7.013;HRun=0;HaplotypeScore=238.4007;InbreedingCoeff=0.8722;MQ=64.97;MQ0=13;MQRankSum=-5.198;QD=43.62;ReadPosRankSum=-2.343;VQSLOD=1.8736;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:70.49:0,70,1019	0/0:11,0:11:24:0,24,320	0/0:29,0:20:36.59:0,37,439	0/0:33,0:18:39.23:0,39,354	0/0:27,0:27:47.71:0,48,499	0/0:14,0:14:30.03:0,30,485	0/0:25,0:25:35.74:0,36,631	0/0:33,0:31:6.94:0,7,374	1/1:1,22:29:27.09:1359,27,0	0/0:35,0:35:17.89:0,18,656	0/0:22,0:22:44.64:0,45,581	0/0:37,0:37:80.59:0,81,1166	0/0:32,0:32:66.60:0,67,857	0/0:34,0:33:58.92:0,59,888	0/0:30,0:30:78.18:0,78,1996	0/0:27,0:27:53.96:0,54,783	0/0:41,0:41:53.43:0,53,880	0/0:21,0:21:47.53:0,48,606	0/0:22,0:21:26.32:0,26,399	0/0:20,0:20:48.01:0,48,558	0/0:48,0:48:62.22:0,62,758	0/0:31,0:31:53.30:0,53,648	0/0:21,0:21:41.85:0,42,436	0/0:50,0:48:99:0,109,1487	0/0:31,0:31:39.16:0,39,839	0/0:23,0:23:53.95:0,54,549	0/0:33,0:30:60.59:0,61,953	0/0:10,0:10:10.34:0,10,238
chr10	31530727	.	T	TTCTG	1116.18	PASS	AC=2;AF=0.037;AN=54;BaseQRankSum=3.985;DP=592;FS=5.153;HRun=0;HaplotypeScore=96.1977;InbreedingCoeff=0.9940;MQ=63.82;MQ0=0;MQRankSum=-2.193;QD=50.74;ReadPosRankSum=1.482;VQSLOD=4.7240;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:87.28:0,87,1607	0/0:9,0:9:27.09:0,27,502	0/0:14,0:13:28.87:0,29,455	0/0:9,0:8:21.06:0,21,353	0/0:36,0:36:99:0,102,1895	0/0:20,0:20:60.20:0,60,1109	0/0:21,0:21:60.18:0,60,1077	0/0:17,0:17:42.13:0,42,740	1/1:0,20:22:45.15:1211,45,0	0/0:18,0:18:51.16:0,51,937	0/0:19,0:19:54.18:0,54,999	0/0:27,0:27:75.22:0,75,1324	0/0:16,0:16:45.11:0,45,817	0/0:24,0:24:72.21:0,72,1244	0/0:26,0:26:72.20:0,72,1263	0/0:22,0:22:60.17:0,60,1039	0/0:35,0:35:99:0,105,1714	0/0:33,0:33:99:0,99,1813	0/0:25,0:25:72.22:0,72,1266	0/0:26,0:26:78.25:0,78,1440	0/0:15,0:15:39.08:0,39,671	0/0:12,0:12:36.12:0,36,683	0/0:18,0:18:48.16:0,48,911	0/0:15,0:15:39.12:0,39,708	0/0:23,0:23:66.22:0,66,1222	0/0:22,0:22:66.21:0,66,1194	0/0:39,0:39:99:0,108,1920	./.
chr10	31531423	.	G	GAC	2889.60	PASS	AB=1.000;AC=46;AF=0.821;AN=56;BaseQRankSum=0.018;DP=306;FS=34.162;HRun=0;HaplotypeScore=58.0524;InbreedingCoeff=0.6272;MQ=77.70;MQ0=28;MQRankSum=-2.731;QD=14.10;ReadPosRankSum=3.404;VQSLOD=1.4884;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,0:9:16.71:121,17,0	1/1:0,8:8:6.02:90,6,0	0/0:26,0:15:22.30:0,22,270	0/0:37,0:13:26.84:0,27,251	1/1:11,0:9:14.97:122,15,0	1/1:9,0:7:17.81:127,18,0	1/1:13,1:14:23.92:192,24,0	1/1:15,0:13:28.21:234,28,0	0/0:22,0:16:14.68:0,15,105	0/1:13,0:13:14.50:198,0,15	1/1:7,0:7:11.99:100,12,0	1/1:6,0:6:17.93:145,18,0	1/1:11,0:11:32.60:231,33,0	1/1:9,0:8:23.62:160,24,0	0/0:16,0:16:36.57:0,37,283	1/1:6,0:5:8.88:61,9,0	1/1:12,0:9:20.82:156,21,0	1/1:3,0:3:8.93:65,9,0	0/1:6,0:6:10.58:39,0,11	1/1:7,0:7:17.95:144,18,0	1/1:7,0:7:17.91:142,18,0	1/1:12,0:12:17.97:148,18,0	1/1:7,0:7:5.94:42,6,0	1/1:7,0:6:8.98:73,9,0	1/1:7,0:7:14.98:125,15,0	1/1:9,1:10:27.01:261,27,0	1/1:3,1:4:8.91:63,9,0	1/1:4,0:2:2.99:23,3,0
chr10	31531510	.	AAT	A	224.07	PASS	AB=0.976;AC=18;AF=0.321;AN=56;BaseQRankSum=-0.246;DP=320;FS=12.457;HRun=0;HaplotypeScore=91.5699;InbreedingCoeff=0.0937;MQ=39.20;MQ0=25;MQRankSum=-1.265;QD=1.40;ReadPosRankSum=0.863;VQSLOD=1.0511;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:16,1:15:2.19:39,2,0	0/1:8,0:7:6.06:6,0,10	0/0:15,0:6:9.70:0,10,138	0/0:6,0:1:3.01:0,3,59	0/0:8,0:8:0.47:0,0,1	0/1:17,0:15:5.22:7,0,5	0/0:14,1:16:2.99:0,3,23	0/0:23,0:19:48.24:0,48,325	0/1:6,1:6:16.07:24,0,16	0/0:9,0:8:21.10:0,21,85	0/1:6,0:7:0:0,0,0	0/0:10,0:10:1.38:0,1,10	1/1:5,2:7:3.39:52,3,0	1/1:10,0:11:2.99:24,3,0	0/0:18,1:19:35.98:0,36,589	0/1:12,0:12:9.75:10,0,18	0/1:9,0:9:3.18:3,0,60	0/0:7,0:7:0.52:0,1,36	0/0:15,0:12:8.13:0,8,121	0/0:6,0:6:0.45:0,0,0	0/1:20,0:16:22.17:22,0,26	0/0:9,0:8:0.47:0,0,1	0/1:10,0:9:0:0,0,0	0/0:7,0:6:0:0,0,0	0/0:9,0:8:2.84:0,3,9	0/1:14,0:14:45.57:46,0,59	1/1:3,1:5:4.33:105,4,0	0/1:13,1:11:12.28:16,0,12
chr10	31531511	.	ATGTATG	A	3417.90	PASS	AB=0.979;AC=42;AF=0.750;AN=56;BaseQRankSum=4.172;DP=339;FS=0.825;HRun=0;HaplotypeScore=94.3874;InbreedingCoeff=0.1850;MQ=39.44;MQ0=24;MQRankSum=-5.244;QD=11.95;ReadPosRankSum=-2.522;VQSLOD=2.1527;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:18:4.98:45,5,0	1/1:8,0:7:14.83:147,15,0	0/0:17,0:7:2.54:0,3,292	0/0:7,0:1:3.01:0,3,107	1/1:8,0:8:11.91:97,12,0	1/1:17,0:15:24.29:326,24,0	1/1:16,0:16:7.35:259,7,0	0/1:24,0:20:46.33:380,0,46	0/1:6,1:6:2.57:42,0,3	1/1:9,0:8:24.06:340,24,0	1/1:7,0:7:5.93:40,6,0	1/1:8,2:10:10.81:92,11,0	1/1:8,1:9:14.29:97,14,0	1/1:11,0:11:6.67:56,7,0	0/0:20,0:20:39.19:0,39,1326	1/1:11,2:13:16.24:229,16,0	0/1:9,0:9:19.57:119,0,20	0/1:9,0:8:37.76:38,0,74	0/1:17,0:14:25.52:167,0,26	1/1:7,0:7:5.98:57,6,0	0/1:23,0:18:17.96:31,0,18	1/1:10,0:9:17.84:136,18,0	1/1:10,0:9:12.34:80,12,0	0/0:9,0:8:0:0,0,0	1/1:9,0:8:8.04:85,8,0	1/1:14,0:14:10.85:249,11,0	1/1:5,0:5:11.70:124,12,0	1/1:14,0:11:4.74:181,5,0
chr10	31531515	.	ATGTGTG	A	5126.34	PASS	AB=0.725;AC=42;AF=0.750;AN=56;BaseQRankSum=-0.318;DP=345;FS=1.971;HRun=0;HaplotypeScore=91.7014;InbreedingCoeff=0.3407;MQ=40.94;MQ0=20;MQRankSum=-4.830;QD=19.27;ReadPosRankSum=-1.234;VQSLOD=3.9847;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,11:19:2.96:54,3,0	1/1:4,5:8:12.03:198,12,0	0/0:21,0:10:2.95:0,3,406	0/0:7,0:1:3.01:0,3,101	1/1:4,5:9:12.04:165,12,0	1/1:7,10:15:30.57:507,31,0	1/1:8,8:16:18.06:379,18,0	1/1:11,13:20:39.03:698,39,0	0/1:4,2:6:16.63:59,0,17	1/1:2,6:8:24.08:496,24,0	1/1:3,3:7:6.02:75,6,0	1/1:4,7:11:9.03:139,9,0	1/1:5,4:9:6.02:103,6,0	0/1:6,4:11:7.58:100,0,8	0/0:20,0:20:39.32:0,39,1301	1/1:6,7:13:6.95:298,7,0	1/1:3,4:8:8.70:185,9,0	0/1:7,2:8:30.96:59,0,31	0/1:9,7:14:1.46:301,0,1	1/1:3,5:9:6.02:93,6,0	0/0:14,6:17:5.97:0,6,53	1/1:2,8:9:18.06:241,18,0	1/1:2,9:10:12.51:150,13,0	0/0:3,6:9:0:0,0,0	1/1:3,6:8:8.13:139,8,0	1/1:9,4:13:8.64:315,9,0	1/1:2,1:5:8.99:121,9,0	1/1:7,6:12:3.22:252,3,0
chr10	31531806	.	CA	C	291.47	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=2.545;DP=547;FS=2.505;HRun=1;HaplotypeScore=99.8378;InbreedingCoeff=0.6568;MQ=79.37;MQ0=0;MQRankSum=-5.402;QD=7.47;ReadPosRankSum=-1.663;VQSLOD=0.2545;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:13.95:0,14,296	0/1:14,0:13:10.38:10,0,155	0/0:14,0:13:39.11:0,39,583	0/0:17,0:17:48.10:0,48,669	0/0:20,0:20:55.92:0,56,363	0/0:35,0:34:99:0,102,614	0/0:15,0:15:43.49:0,43,245	0/0:31,0:30:22.92:0,23,334	1/1:5,20:25:56:384,56,0	0/0:19,0:19:34.52:0,35,265	0/0:17,0:17:35.39:0,35,230	0/0:20,0:20:58.17:0,58,339	0/0:24,0:24:35.68:0,36,321	0/0:18,0:18:45.94:0,46,267	0/0:29,0:29:87.27:0,87,1337	0/0:17,0:17:49.42:0,49,280	0/0:13,0:13:38.11:0,38,234	0/0:11,0:11:28.60:0,29,172	0/0:14,0:14:40.25:0,40,214	0/0:13,0:13:35.14:0,35,214	0/0:22,0:22:64.27:0,64,378	0/0:17,0:17:44.25:0,44,299	0/0:22,0:21:57.08:0,57,382	0/0:14,0:14:40.87:0,41,239	0/0:16,0:16:43.98:0,44,272	0/0:29,0:29:56.76:0,57,423	0/0:21,0:20:61.43:0,61,371	0/0:18,0:18:43.03:0,43,289
chr10	31531809	.	TATAA	T	715.37	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.875;DP=538;FS=0.839;HRun=0;HaplotypeScore=128.5435;InbreedingCoeff=0.9987;MQ=77.58;MQ0=0;MQRankSum=-6.832;QD=29.81;ReadPosRankSum=2.200;VQSLOD=3.3864;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:69.24:0,69,1832	0/0:13,0:12:30.10:0,30,794	0/0:13,0:12:36.12:0,36,992	0/0:15,0:15:36.01:0,36,786	0/0:21,0:21:62.91:0,63,1508	0/0:36,0:35:99:0,108,2935	0/0:15,0:15:45.05:0,45,1203	0/0:29,0:28:87.30:0,87,2307	1/1:4,20:24:63.12:810,63,0	0/0:18,0:18:54.18:0,54,1475	0/0:17,0:17:48.08:0,48,1150	0/0:20,0:20:60.12:0,60,1617	0/0:21,0:21:60.04:0,60,1635	0/0:17,0:17:51.17:0,51,1384	0/0:27,0:27:81.26:0,81,2246	0/0:18,0:18:54.02:0,54,1409	0/0:13,0:13:39.13:0,39,1130	0/0:11,0:11:33.11:0,33,946	0/0:14,0:14:41.97:0,42,1067	0/0:13,0:13:36.02:0,36,966	0/0:23,0:23:69.24:0,69,1908	0/0:18,0:18:51.07:0,51,1323	0/0:22,0:21:63.22:0,63,1780	0/0:14,0:14:42.14:0,42,1169	0/0:16,0:16:48.16:0,48,1319	0/0:28,0:28:84.09:0,84,2207	0/0:22,0:21:65.97:0,66,1722	0/0:17,0:17:45.15:0,45,1302
chr10	31533056	.	AT	A	454.31	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.220;DP=692;FS=2.665;HRun=9;HaplotypeScore=70.4380;InbreedingCoeff=0.9877;MQ=71.58;MQ0=0;MQRankSum=0.326;QD=18.93;ReadPosRankSum=1.756;VQSLOD=4.3035;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:56:99:0,165,1842	0/0:10,0:10:27.08:0,27,312	0/0:12,0:12:20.27:0,20,207	0/0:12,0:11:23.12:0,23,253	0/0:37,0:37:93.28:0,93,1073	0/0:26,0:26:69.11:0,69,758	0/0:32,1:33:65.77:0,66,983	0/0:18,0:18:48.10:0,48,519	1/1:1,23:24:60.03:549,60,0	0/0:22,0:22:63.19:0,63,727	0/0:16,0:16:42.11:0,42,474	0/0:26,0:26:66.18:0,66,752	0/0:21,0:21:45.12:0,45,511	0/0:23,0:23:69.16:0,69,760	0/0:22,0:22:66.18:0,66,751	0/0:24,0:24:72.20:0,72,821	0/0:35,0:35:96.24:0,96,1084	0/0:19,1:20:23.69:0,24,526	0/0:16,0:16:42.12:0,42,476	0/0:24,0:24:66.18:0,66,753	0/0:28,2:30:32.32:0,32,880	0/0:27,0:27:78.22:0,78,892	0/0:11,0:11:27.07:0,27,302	0/0:37,0:37:99:0,105,1203	0/0:36,0:36:99:0,105,1212	0/0:38,0:38:99:0,105,1175	0/0:26,0:26:78.21:0,78,887	0/0:10,0:10:30.07:0,30,335
chr10	31534661	.	AGTGT	A	412.33	PASS	AB=0.870;AC=25;AF=0.521;AN=48;BaseQRankSum=-0.525;DP=651;FS=0.000;HRun=0;HaplotypeScore=102.9479;InbreedingCoeff=0.2350;MQ=73.27;MQ0=10;MQRankSum=0.239;QD=1.23;ReadPosRankSum=0.653;VQSLOD=1.5927;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:26,7:33:31.44:40,0,31	0/0:4,0:4:3.01:0,3,49	./.	./.	1/1:15,0:18:3.01:46,3,0	0/0:16,0:14:8.75:0,9,74	0/1:23,1:26:23.22:37,0,23	0/0:24,0:24:2.04:0,2,6	0/0:21,0:27:6.02:0,6,116	1/1:17,2:18:3:45,3,0	1/1:8,3:11:3.01:46,3,0	0/0:21,0:21:0:0,0,0	0/0:21,0:21:0.47:0,0,1	1/1:27,0:27:2.99:28,3,0	0/0:21,0:29:12.02:0,12,181	./.	0/1:29,2:32:44.27:83,0,44	0/0:17,0:21:11.72:0,12,108	1/1:20,0:19:2.98:23,3,0	1/1:17,0:20:2.74:12,3,0	1/1:56,0:55:0.47:1,0,0	1/1:11,3:14:3.01:46,3,0	0/0:12,0:12:0:0,0,0	1/1:26,0:27:3:43,3,0	1/1:20,0:20:3:46,3,0	0/0:23,0:23:0.28:0,0,1	./.	1/1:7,3:10:3.01:46,3,0
chr10	31536877	.	GCAGA	G	2821.37	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=7.924;DP=813;FS=2.404;HRun=0;HaplotypeScore=146.1479;InbreedingCoeff=0.9998;MQ=86.74;MQ0=0;MQRankSum=-2.177;QD=39.19;ReadPosRankSum=2.122;VQSLOD=4.1435;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,111,2718	1/1:3,17:20:45.11:784,45,0	0/0:30,0:29:72.25:0,72,1734	0/0:25,0:25:69.23:0,69,1610	0/0:32,0:32:84.27:0,84,2102	1/1:0,31:31:66.23:1200,66,0	1/1:0,21:21:54.19:981,54,0	0/0:34,0:34:87.26:0,87,1970	0/0:25,0:25:75.26:0,75,1925	0/0:32,0:32:90.30:0,90,2292	0/0:32,0:32:84.27:0,84,2104	0/0:40,0:40:99:0,114,2848	0/0:28,0:28:81.28:0,81,2021	0/0:24,0:24:69.22:0,69,1726	0/0:35,0:35:99:0,99,2524	0/0:30,0:29:87.28:0,87,2188	0/0:35,0:35:99:0,105,2726	0/0:13,0:13:29.93:0,30,691	0/0:28,0:28:78.20:0,78,1913	0/0:34,0:34:90.31:0,90,2357	0/0:24,0:24:66.21:0,66,1658	0/0:31,0:31:75.26:0,75,1907	0/0:27,0:27:72.25:0,72,1818	0/0:26,0:26:72.23:0,72,1775	0/0:38,0:38:99:0,105,2654	0/0:28,0:28:69.24:0,69,1758	0/0:22,0:21:57.20:0,57,1456	0/0:29,0:27:75.26:0,75,1964
chr10	31537429	.	AGT	A	340.55	PASS	AB=0.914;AC=17;AF=0.327;AN=52;BaseQRankSum=5.143;DP=630;FS=0.608;HRun=0;HaplotypeScore=88.5968;InbreedingCoeff=-0.1695;MQ=56.64;MQ0=8;MQRankSum=0.565;QD=1.05;ReadPosRankSum=0.677;VQSLOD=1.2439;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:35,2:37:20.73:21,0,417	./.	./.	0/0:28,0:18:0.89:0,1,2	0/0:28,0:27:2.36:0,2,395	1/1:18,0:37:25.57:125,26,0	1/1:11,0:20:7.28:28,7,0	0/0:32,0:31:1.07:0,1,183	0/0:21,0:21:17.76:0,18,247	0/1:16,1:17:13.29:13,0,228	0/1:12,2:14:19.42:19,0,125	0/1:16,0:16:6.36:6,0,242	0/0:12,0:12:11.98:0,12,133	0/1:13,2:15:25.25:25,0,259	0/0:16,0:32:27.01:0,27,255	0/0:27,3:30:20.80:0,21,612	0/1:32,6:38:76.31:76,0,547	0/0:26,0:26:22.56:0,23,328	0/1:17,0:17:31.61:32,0,54	0/1:18,3:20:34.57:35,0,290	0/0:30,0:30:16.67:0,17,507	0/1:20,1:19:3.44:3,0,339	0/1:17,1:18:4.02:4,0,277	0/0:16,0:15:3.13:0,3,281	0/0:33,0:32:22.94:0,23,502	0/1:12,5:18:75.93:76,0,80	0/1:22,5:27:15.22:15,0,181	0/1:7,0:7:9.36:9,0,139
chr10	31537513	.	GAA	G	737.16	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-2.257;DP=572;FS=3.348;HRun=2;HaplotypeScore=95.9526;InbreedingCoeff=0.9963;MQ=97.12;MQ0=0;MQRankSum=-1.413;QD=35.10;ReadPosRankSum=1.682;VQSLOD=3.9929;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:93.32:0,93,1889	0/0:9,0:9:27.09:0,27,522	0/0:20,0:20:60.21:0,60,1183	0/0:38,0:38:97.11:0,97,1992	0/0:28,0:28:84.25:0,84,1666	0/0:28,0:28:69.20:0,69,1330	0/0:24,0:24:72.25:0,72,1440	0/0:26,0:26:78.27:0,78,1586	1/1:0,21:21:51.17:832,51,0	0/0:28,0:28:84.29:0,84,1697	0/0:10,0:10:27.09:0,27,549	0/0:16,0:16:48.16:0,48,975	0/0:17,0:17:51.18:0,51,1026	0/0:16,0:16:48.16:0,48,965	0/0:16,0:16:39.12:0,39,757	0/0:26,0:26:69.24:0,69,1368	0/0:31,0:31:84.23:0,84,1615	0/0:15,0:15:39.13:0,39,772	0/0:9,0:9:27.09:0,27,549	0/0:17,0:17:51.18:0,51,1036	0/0:16,0:16:48.16:0,48,937	0/0:11,0:11:30.10:0,30,579	0/0:16,0:16:48.15:0,48,921	0/0:17,0:17:45.15:0,45,914	0/0:21,0:21:63.22:0,63,1281	0/0:19,0:19:54.19:0,54,1082	0/0:27,0:27:78.27:0,78,1584	0/0:15,0:15:45.15:0,45,910
chr10	31537781	.	A	AC	1297.32	PASS	AB=0.994;AC=8;AF=0.143;AN=56;BaseQRankSum=2.309;DP=606;FS=5.032;HRun=0;HaplotypeScore=157.5832;InbreedingCoeff=0.7317;MQ=64.38;MQ0=27;MQRankSum=-2.698;QD=6.59;ReadPosRankSum=1.732;VQSLOD=3.4463;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:84.08:0,84,956	1/1:2,4:6:17.96:176,18,0	0/1:67,0:18:4.73:5,0,155	0/1:76,1:21:28.24:28,0,139	0/0:24,0:23:67.70:0,68,716	1/1:10,15:25:56.63:615,57,0	1/1:7,15:22:58.65:623,59,0	0/0:22,0:22:57.06:0,57,423	0/0:16,0:16:16.22:0,16,154	0/0:18,0:17:41.94:0,42,473	0/0:16,0:16:34.86:0,35,408	0/0:11,0:11:30.05:0,30,328	0/0:16,0:16:42.92:0,43,450	0/0:16,0:16:47.76:0,48,501	0/0:21,0:21:57.85:0,58,610	0/0:16,0:16:47.78:0,48,494	0/0:23,0:23:54.03:0,54,495	0/0:18,0:18:50.41:0,50,526	0/0:22,0:18:44.52:0,45,329	0/0:14,0:14:41.70:0,42,314	0/0:13,0:13:26.77:0,27,195	0/0:14,0:14:42.06:0,42,489	0/0:14,0:14:41.63:0,42,441	0/0:13,0:13:37.39:0,37,385	0/0:12,0:12:35.40:0,35,342	0/0:27,0:24:71.06:0,71,769	0/0:24,0:24:65.03:0,65,464	0/0:9,0:9:23.75:0,24,229
chr10	31537787	.	A	AC	737.44	PASS	AB=0.957;AC=23;AF=0.411;AN=56;BaseQRankSum=6.463;DP=605;FS=0.000;HRun=0;HaplotypeScore=160.9579;InbreedingCoeff=-0.0292;MQ=66.63;MQ0=27;MQRankSum=3.446;QD=2.33;ReadPosRankSum=2.934;VQSLOD=2.9886;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:32:33.39:107,0,33	0/0:6,0:6:0.22:0,0,4	0/0:76,0:26:34.47:0,34,319	0/0:77,0:22:2.97:0,3,150	0/1:22,2:23:37.97:38,0,45	1/1:24,0:24:1.32:36,1,0	0/1:22,0:22:13.81:14,0,28	0/0:21,0:21:52.38:0,52,308	0/0:16,0:16:0.55:0,1,53	0/1:15,1:15:36.12:36,0,43	0/1:14,0:14:9.72:30,0,10	1/1:9,0:9:6.50:23,7,0	0/1:15,1:16:7.13:80,0,7	0/1:14,2:16:10.64:70,0,11	0/0:20,0:20:54.68:0,55,565	0/1:16,0:16:12.44:12,0,42	0/1:23,0:23:20.49:40,0,20	1/1:15,0:15:5.99:91,6,0	0/0:22,0:18:49.27:0,49,322	0/0:16,0:16:46.42:0,46,292	0/0:13,0:13:22.94:0,23,133	0/1:14,0:14:2.81:9,0,3	1/1:13,1:14:16.67:122,17,0	0/1:12,1:13:19.53:27,0,20	0/1:11,1:12:18.95:19,0,47	1/1:26,0:23:16.76:121,17,0	0/0:22,0:22:60.51:0,61,352	0/1:8,1:9:12.93:30,0,13
chr10	31537789	.	AC	A	5534.91	PASS	AB=0.993;AC=42;AF=0.750;AN=56;BaseQRankSum=4.977;DP=595;FS=3.831;HRun=1;HaplotypeScore=140.6889;InbreedingCoeff=0.7834;MQ=67.73;MQ0=27;MQRankSum=0.630;QD=13.31;ReadPosRankSum=4.070;VQSLOD=4.3787;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:30,2:31:79.76:533,80,0	1/1:6,0:6:17.68:113,18,0	0/1:72,1:25:9.10:9,0,179	0/0:80,0:24:10.55:0,11,197	1/1:22,0:21:53.40:317,53,0	1/1:22,0:22:56.42:419,56,0	1/1:20,1:21:54.53:356,55,0	0/0:22,0:22:7.08:0,7,194	1/1:15,0:15:16.96:111,17,0	1/1:16,0:15:33.08:212,33,0	1/1:13,1:14:34.31:229,34,0	1/1:9,0:9:19.01:145,19,0	1/1:16,0:16:42.89:262,43,0	1/1:14,0:14:36.11:228,36,0	0/0:20,0:20:38.98:0,39,388	1/1:14,1:15:40.41:259,40,0	1/1:1,21:22:42.04:525,42,0	1/1:15,0:15:43.49:268,43,0	0/0:22,0:18:14.51:0,15,198	0/1:16,0:16:9.14:9,0,119	0/0:13,0:13:8.79:0,9,81	1/1:11,2:13:37.95:278,38,0	1/1:13,1:14:40.98:303,41,0	1/1:13,0:13:29.15:164,29,0	1/1:11,0:11:29.02:178,29,0	1/1:27,0:24:67.50:489,67,0	0/0:22,0:22:18.36:0,18,120	1/1:9,0:9:17.78:128,18,0
chr10	31537790	.	C	CAA	2086.88	PASS	AB=1.000;AC=18;AF=0.321;AN=56;BaseQRankSum=-0.504;DP=609;FS=5.178;HRun=14;HaplotypeScore=171.9630;InbreedingCoeff=0.1685;MQ=68.13;MQ0=27;MQRankSum=-0.667;QD=8.48;ReadPosRankSum=-5.063;VQSLOD=-0.6553;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:32:12.67:13,0,175	1/1:6,0:6:18.04:207,18,0	0/0:77,0:28:22.02:0,22,326	0/0:81,0:26:20.85:0,21,300	0/1:23,0:22:4.22:4,0,132	1/1:22,0:22:57.17:729,57,0	1/1:22,0:22:54.15:646,54,0	0/0:22,0:22:48.11:0,48,561	1/1:12,6:19:30.24:477,30,0	0/0:17,0:16:3.08:0,3,66	0/1:15,0:15:5.54:6,0,56	0/1:9,0:9:23.12:32,0,23	0/1:16,0:16:33.58:34,0,50	0/1:14,0:14:1.64:2,0,66	0/0:18,0:18:34.56:0,35,515	0/1:15,0:15:11.13:11,0,68	0/0:22,0:22:13.39:0,13,43	0/0:14,0:15:7.50:0,7,89	0/0:22,0:18:45:0,45,547	0/0:16,0:16:39.11:0,39,459	0/0:14,0:14:21:0,21,238	0/0:13,0:13:6.21:0,6,83	0/1:14,0:14:25.36:25,0,54	0/0:12,0:13:16.37:0,16,86	0/1:11,0:11:22.49:22,0,33	0/1:27,0:24:52.92:53,0,103	0/0:23,0:23:60.05:0,60,649	0/0:9,0:9:0.51:0,1,33
chr10	31537846	.	T	TCA	3095.05	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-2.344;DP=546;FS=8.853;HRun=0;HaplotypeScore=111.4926;InbreedingCoeff=0.9894;MQ=75.97;MQ0=3;MQRankSum=-0.421;QD=39.68;ReadPosRankSum=1.479;VQSLOD=5.4902;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,102,1500	1/1:1,9:10:20.81:391,21,0	0/0:40,0:31:49.01:0,49,637	0/0:46,0:28:13.91:0,14,321	0/0:17,0:17:45.15:0,45,659	1/1:0,14:14:30.10:562,30,0	1/1:4,30:34:75.26:1404,75,0	0/0:20,0:20:51.17:0,51,751	1/1:1,19:20:48.16:898,48,0	0/0:11,1:12:33.10:0,33,468	0/0:13,0:13:39.13:0,39,572	0/0:17,0:17:51.14:0,51,712	0/0:11,0:11:30.10:0,30,439	0/0:13,0:13:39.13:0,39,572	0/0:23,0:23:69.23:0,69,1013	0/0:21,0:21:60.20:0,60,880	0/0:31,0:31:72.24:0,72,1060	0/0:21,0:21:54.18:0,54,795	0/0:15,0:15:42.14:0,42,614	0/0:18,0:18:51.17:0,51,736	0/0:27,0:27:54.18:0,54,792	0/0:9,0:9:27.08:0,27,378	0/0:9,0:9:27.09:0,27,397	0/0:19,0:19:51.17:0,51,745	0/0:9,0:8:24.08:0,24,352	0/0:15,0:15:45.15:0,45,661	0/0:20,0:20:57.19:0,57,838	0/0:7,0:7:18.06:0,18,265
chr10	31538750	.	CT	C	10096.66	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=10.504;DP=487;FS=0.000;HRun=7;HaplotypeScore=78.4442;InbreedingCoeff=0.9963;MQ=74.35;MQ0=0;MQRankSum=-2.374;QD=25.69;ReadPosRankSum=2.397;VQSLOD=5.3985;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,21:23:54.12:550,54,0	0/0:11,0:11:30.07:0,30,361	0/0:12,0:11:26.44:0,26,288	0/0:15,0:11:15.86:0,16,264	1/1:2,13:15:38.97:374,39,0	0/0:18,0:18:48.15:0,48,593	0/0:21,0:21:54.17:0,54,679	1/1:1,15:16:44.66:416,45,0	1/1:2,14:16:36.08:367,36,0	1/1:1,19:20:57.13:581,57,0	1/1:0,10:10:30.07:305,30,0	1/1:2,18:20:51.11:519,51,0	1/1:0,14:14:36.08:367,36,0	1/1:3,22:25:63.14:642,63,0	0/0:17,0:17:48.14:0,48,591	1/1:2,12:14:30.07:306,30,0	1/1:1,25:26:66.15:673,66,0	1/1:1,20:21:48.11:489,48,0	1/1:2,13:15:38.88:380,39,0	1/1:1,17:18:48.11:488,48,0	1/1:4,10:14:27.06:275,27,0	1/1:0,12:12:36.08:367,36,0	1/1:0,13:13:36.08:367,36,0	1/1:1,25:26:69.16:703,69,0	1/1:2,20:22:57.13:581,57,0	1/1:1,23:24:68.46:643,68,0	1/1:3,16:19:39.09:398,39,0	1/1:0,10:10:30.07:306,30,0
chr10	31538891	.	TA	T	720.59	PASS	AB=0.958;AC=8;AF=0.143;AN=56;BaseQRankSum=8.538;DP=531;FS=3.673;HRun=11;HaplotypeScore=63.5672;InbreedingCoeff=0.7624;MQ=78.26;MQ0=0;MQRankSum=-6.727;QD=8.79;ReadPosRankSum=-1.122;VQSLOD=2.2856;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:84.17:0,84,872	1/1:1,8:9:23.85:188,24,0	0/1:24,0:20:0.86:1,0,305	0/1:10,1:10:12.33:12,0,147	0/0:17,0:17:44.48:0,44,456	1/1:8,13:21:41.70:327,42,0	1/1:4,13:17:41.92:341,42,0	0/0:23,0:23:54.08:0,54,539	0/0:15,0:15:42.11:0,42,447	0/0:16,0:16:45.07:0,45,455	0/0:11,0:11:21.01:0,21,212	0/0:20,2:22:35.48:0,35,567	0/0:19,0:19:39.09:0,39,409	0/0:15,1:16:17.46:0,17,391	0/0:22,0:22:60.15:0,60,639	0/0:17,0:17:45.11:0,45,480	0/0:29,0:29:70.29:0,70,802	0/0:27,0:27:66.14:0,66,692	0/0:15,0:15:36.06:0,36,368	0/0:21,0:21:56.33:0,56,563	0/0:14,0:14:42.11:0,42,448	0/0:8,0:8:18.04:0,18,191	0/0:19,1:20:26.42:0,26,472	0/0:22,0:22:60.15:0,60,640	0/0:26,0:26:66.04:0,66,640	0/0:23,0:23:60.13:0,60,627	0/0:24,1:24:38.50:0,39,607	0/0:7,0:7:21.03:0,21,215
chr10	31538907	.	AAGTTT	A	1518.48	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.250;DP=516;FS=0.000;HRun=0;HaplotypeScore=100.9109;InbreedingCoeff=0.9887;MQ=77.99;MQ0=0;MQRankSum=-7.708;QD=37.96;ReadPosRankSum=0.575;VQSLOD=2.9760;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:84.29:0,84,2545	1/1:1,7:8:21.07:441,21,0	0/0:17,0:15:35.51:0,36,896	0/0:15,0:14:37.31:0,37,916	0/0:14,0:14:36.12:0,36,1063	1/1:5,11:16:27.09:567,27,0	1/1:3,13:16:33.09:653,33,0	0/0:30,0:30:84.28:0,84,2360	0/0:16,0:16:42.14:0,42,1252	0/0:18,0:18:42.14:0,42,1250	0/0:10,0:10:24.08:0,24,727	0/0:21,0:21:60.21:0,60,1849	0/0:18,0:18:51.17:0,51,1502	0/0:17,0:17:51.15:0,51,1412	0/0:24,0:24:63.22:0,63,1949	0/0:15,0:15:45.14:0,45,1170	0/0:29,0:29:81.25:0,81,2405	0/0:25,0:25:66.23:0,66,1975	0/0:17,0:17:48.16:0,48,1371	0/0:19,0:19:57.20:0,57,1707	0/0:13,0:13:36.12:0,36,1063	0/0:6,0:6:15.05:0,15,458	0/0:19,0:19:51.16:0,51,1479	0/0:21,0:21:63.22:0,63,1938	0/0:27,0:27:81.28:0,81,2507	0/0:23,0:23:54.17:0,54,1603	0/0:23,0:22:60.21:0,60,1697	0/0:8,0:8:18.06:0,18,557
chr10	31542752	.	GT	G	8362.89	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=16.814;DP=470;FS=6.835;HRun=2;HaplotypeScore=107.5691;InbreedingCoeff=0.9954;MQ=89.30;MQ0=0;MQRankSum=-5.539;QD=31.68;ReadPosRankSum=4.266;VQSLOD=4.1955;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,24:26:63.20:781,63,0	0/0:6,0:6:18.06:0,18,270	0/0:20,0:20:54.64:0,55,776	0/0:22,0:22:42.52:0,43,709	1/1:0,23:23:57.18:706,57,0	0/0:18,0:18:54.18:0,54,809	0/0:18,0:18:54.18:0,54,799	0/0:35,0:35:99:0,105,1533	1/1:0,12:12:36.11:446,36,0	1/1:3,13:16:39.08:465,39,0	1/1:2,21:23:48.15:594,48,0	1/1:2,18:20:54.17:669,54,0	1/1:0,15:15:42.13:520,42,0	1/1:0,11:11:30.09:372,30,0	0/0:13,0:13:39.13:0,39,585	1/1:2,12:14:36.11:446,36,0	1/1:2,17:19:51.12:615,51,0	1/1:0,16:16:42.13:521,42,0	0/0:15,0:15:42.13:0,42,611	0/0:15,0:15:45.15:0,45,675	0/0:17,0:17:51.17:0,51,765	1/1:1,5:6:15.05:185,15,0	1/1:0,8:8:21.07:260,21,0	1/1:0,9:9:23.40:296,23,0	1/1:3,14:17:39.12:484,39,0	1/1:2,17:19:51.16:632,51,0	0/0:27,0:27:81.27:0,81,1213	1/1:0,10:10:30.09:372,30,0
chr10	31542944	.	GAA	G	445.95	PASS	AB=0.929;AC=3;AF=0.054;AN=56;BaseQRankSum=3.177;DP=492;FS=2.540;HRun=2;HaplotypeScore=122.7128;InbreedingCoeff=0.6591;MQ=72.94;MQ0=0;MQRankSum=-1.588;QD=17.15;ReadPosRankSum=0.673;VQSLOD=1.2525;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:66.18:0,66,1263	0/0:9,0:9:27.09:0,27,549	0/0:10,0:9:27.09:0,27,545	0/0:10,0:10:21.85:0,22,380	0/0:33,0:33:96.32:0,96,1903	0/0:25,0:25:75.26:0,75,1515	0/0:12,0:12:36.12:0,36,731	0/0:39,0:39:99:0,114,2221	1/1:0,13:13:33.11:538,33,0	0/0:29,0:29:87.28:0,87,1680	0/0:28,0:28:84.25:0,84,1655	0/0:16,0:16:48.16:0,48,973	0/0:13,0:13:39.13:0,39,766	0/0:15,0:15:42.10:0,42,812	0/0:17,0:17:51.18:0,51,1027	0/1:12,1:13:9.82:10,0,692	0/0:26,0:26:75.26:0,75,1522	0/0:27,0:27:81.28:0,81,1644	0/0:10,0:10:30.10:0,30,610	0/0:13,0:13:39.13:0,39,792	0/0:8,0:8:24.08:0,24,488	0/0:11,0:11:33.08:0,33,631	0/0:11,0:11:33.11:0,33,670	0/0:5,0:5:15.05:0,15,293	0/0:19,0:19:54.19:0,54,1090	0/0:18,0:18:54.19:0,54,1098	0/0:25,0:25:75.26:0,75,1523	0/0:15,0:15:45.15:0,45,885
chr10	31543265	.	A	AC	18669.14	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-15.700;DP=670;FS=3.016;HRun=0;HaplotypeScore=54.9906;InbreedingCoeff=0.9996;MQ=58.46;MQ0=1;MQRankSum=1.422;QD=42.92;ReadPosRankSum=5.497;VQSLOD=4.9955;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,44:44:99:2014,126,0	0/0:11,0:11:33.11:0,33,460	0/0:15,0:9:24.03:0,24,289	0/0:19,0:16:44.71:0,45,562	1/1:0,28:28:81.28:1294,81,0	0/0:25,0:25:75.25:0,75,1048	0/0:22,0:22:66.19:0,66,888	0/0:21,0:21:63.21:0,63,875	1/1:1,28:29:81.28:1295,81,0	1/1:2,26:28:81.27:1269,81,0	1/1:1,24:25:63.21:993,63,0	1/1:0,34:34:93.32:1487,93,0	1/1:0,20:20:57.19:911,57,0	1/1:1,18:19:51.17:802,51,0	0/0:26,0:26:78.25:0,78,1073	1/1:1,23:24:66.22:1055,66,0	1/1:0,31:31:75.25:1180,75,0	1/1:0,23:23:51.17:815,51,0	0/0:26,0:26:78.26:0,78,1090	0/0:20,0:20:60.19:0,60,818	0/0:17,0:17:51.17:0,51,713	1/1:0,28:28:78.27:1247,78,0	1/1:0,21:21:57.19:911,57,0	1/1:1,16:17:39.13:624,39,0	1/1:1,17:18:42.14:672,42,0	1/1:0,25:25:75.26:1189,75,0	0/0:33,0:33:95.91:0,96,1324	1/1:2,19:20:57.19:911,57,0
chr10	31543459	.	AT	A	11763.25	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=18.888;DP=654;FS=5.590;HRun=5;HaplotypeScore=99.7943;InbreedingCoeff=0.9976;MQ=86.85;MQ0=0;MQRankSum=-6.022;QD=30.40;ReadPosRankSum=4.167;VQSLOD=4.9845;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,38:40:99:1259,111,0	0/0:5,0:5:15.04:0,15,189	0/0:23,0:23:66.21:0,66,874	0/0:21,0:21:47.26:0,47,618	1/1:1,22:23:63.18:715,63,0	0/0:27,0:27:78.25:0,78,1052	0/0:34,0:34:96.31:0,96,1296	0/0:29,0:29:78.22:0,78,1030	1/1:1,22:23:66.19:749,66,0	1/1:2,22:24:66.19:748,66,0	1/1:4,12:16:36.10:408,36,0	1/1:1,22:23:60.17:681,60,0	1/1:3,23:26:60.17:681,60,0	1/1:4,12:16:33.09:373,33,0	0/0:30,0:30:87.28:0,87,1177	1/1:1,23:24:60.17:681,60,0	1/1:0,23:23:69.20:782,69,0	1/1:0,14:14:39.11:442,39,0	0/0:24,0:24:63.20:0,63,847	0/0:13,0:13:36.11:0,36,478	0/0:25,0:25:72.23:0,72,970	1/1:1,25:26:75.21:851,75,0	1/1:0,21:21:51.15:579,51,0	1/1:1,20:21:60.17:681,60,0	1/1:1,23:24:66.19:749,66,0	1/1:0,29:29:87.23:977,87,0	0/0:36,0:36:99:0,99,1336	1/1:1,13:13:36.10:408,36,0
chr10	31545434	.	A	AAGAAACCGTCACGCG	2846.01	PASS	AB=0.533;AC=1;AF=0.018;AN=56;BaseQRankSum=-6.193;DP=866;FS=19.993;HRun=0;HaplotypeScore=339.3743;InbreedingCoeff=-0.0182;MQ=76.56;MQ0=0;MQRankSum=-6.159;QD=118.58;ReadPosRankSum=3.167;VQSLOD=2.8024;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,111,4626	0/0:16,0:16:48.15:0,48,2089	0/0:24,0:23:69.23:0,69,2693	0/0:37,0:36:99:0,101,3210	0/0:26,0:26:72.22:0,72,3017	0/0:22,0:22:64.71:0,65,2295	0/0:35,0:35:99:0,99,3424	0/0:19,0:19:54.18:0,54,2403	0/1:3,12:24:72.45:2920,0,72	0/0:35,0:35:99:0,105,4170	0/0:21,0:21:63.14:0,63,2213	0/0:47,0:47:99:0,135,5877	0/0:38,0:38:99:0,114,4907	0/0:39,0:39:99:0,114,4900	0/0:46,0:46:99:0,135,5613	0/0:36,0:36:99:0,108,4424	0/0:35,0:35:99:0,105,4154	0/0:19,0:19:54.15:0,54,2062	0/0:35,0:35:99:0,102,3921	0/0:26,0:26:78.27:0,78,3288	0/0:42,0:42:99:0,126,5431	0/0:26,0:26:78.25:0,78,3297	0/0:19,0:19:51.13:0,51,1926	0/0:45,0:45:99:0,135,5822	0/0:17,0:17:51.16:0,51,2157	0/0:41,0:41:99:0,117,4931	0/0:42,0:42:99:0,126,5060	0/0:15,0:15:45.10:0,45,1556
chr10	31545538	.	A	AACAGGAAAGG	2941.78	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=1.620;DP=776;FS=4.164;HRun=0;HaplotypeScore=226.9017;InbreedingCoeff=0.9914;MQ=87.83;MQ0=0;MQRankSum=-7.943;QD=117.67;ReadPosRankSum=-0.431;VQSLOD=3.7301;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,114,3625	0/0:12,0:12:30.09:0,30,915	0/0:25,0:25:66.12:0,66,1676	0/0:29,0:29:74.51:0,75,1946	0/0:15,0:15:45.15:0,45,1427	0/0:17,0:17:45.14:0,45,1410	0/0:40,0:40:99:0,114,3504	0/0:25,0:25:60.21:0,60,1893	1/1:11,13:25:66.23:3037,66,0	0/0:29,0:29:81.27:0,81,2528	0/0:20,0:20:45.14:0,45,1408	0/0:40,0:40:99:0,114,3513	0/0:43,0:43:99:0,129,3909	0/0:37,0:37:99:0,102,3232	0/0:56,0:56:99:0,166,5272	0/0:29,0:29:81.28:0,81,2499	0/0:43,0:43:99:0,129,3979	0/0:22,0:22:66.23:0,66,2143	0/0:26,0:26:69.17:0,69,1928	0/0:17,0:17:42.13:0,42,1207	0/0:30,0:30:90.25:0,90,2705	0/0:17,0:17:48.13:0,48,1415	0/0:15,0:15:39.11:0,39,1138	0/0:40,0:40:99:0,114,3338	0/0:19,0:19:54.19:0,54,1780	0/0:32,0:32:90.31:0,90,2887	0/0:28,0:28:78.25:0,78,2319	0/0:6,0:6:18.06:0,18,561
chr10	31546305	.	CACGATGA	C	1960.46	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=8.313;DP=783;FS=1.575;HRun=0;HaplotypeScore=172.7873;InbreedingCoeff=0.9988;MQ=82.04;MQ0=0;MQRankSum=-8.729;QD=59.41;ReadPosRankSum=1.225;VQSLOD=3.6424;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,105,4004	0/0:11,0:11:30.10:0,30,1197	0/0:31,0:31:86.87:0,87,3107	0/0:24,0:24:62.97:0,63,2294	0/0:28,0:28:81.28:0,81,3200	0/0:25,0:25:72.25:0,72,2831	0/0:16,0:16:48.16:0,48,1855	0/0:29,0:29:84.29:0,84,3346	1/1:3,30:33:78.27:2055,78,0	0/0:42,0:42:99:0,117,4517	0/0:24,0:24:63.22:0,63,2544	0/0:37,0:37:99:0,108,4248	0/0:32,0:32:90.31:0,90,3601	0/0:33,0:33:93.30:0,93,3613	0/0:42,0:42:99:0,123,4595	0/0:36,1:37:29.31:0,29,4145	0/0:21,0:21:63.22:0,63,2497	0/0:26,0:26:75.26:0,75,3015	0/0:19,0:19:57.15:0,57,2027	0/0:33,0:33:99:0,99,3892	0/0:25,0:25:69.24:0,69,2696	0/0:28,0:28:84.29:0,84,3329	0/0:21,0:21:57.18:0,57,2148	0/0:32,0:32:96.33:0,96,3775	0/0:26,0:26:75.26:0,75,3025	0/0:33,0:33:99:0,99,3941	0/0:25,0:25:75.26:0,75,2945	0/0:14,0:14:42.14:0,42,1696
chr10	31546617	.	T	TA	2482.55	PASS	AB=0.701;AC=32;AF=0.571;AN=56;BaseQRankSum=-1.591;DP=630;FS=8.583;HRun=15;HaplotypeScore=92.2204;InbreedingCoeff=-0.0848;MQ=74.35;MQ0=0;MQRankSum=0.016;QD=4.44;ReadPosRankSum=-3.378;VQSLOD=0.5500;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:13,13:27:41.15:98,0,41	0/0:2,0:2:2.87:0,3,18	0/0:15,0:17:9.91:0,10,46	0/0:8,0:7:1.78:0,2,4	0/1:13,15:29:4.58:178,0,5	0/0:20,1:21:17.92:0,18,213	0/0:21,0:21:31.89:0,32,192	0/1:29,9:40:27.42:197,0,27	1/1:12,0:11:15.38:90,15,0	1/1:11,14:26:19.17:145,19,0	0/1:13,10:23:38.58:122,0,39	0/1:9,19:28:2.10:87,0,2	0/1:17,17:34:2.88:165,0,3	1/1:6,20:27:17.89:142,18,0	0/1:24,1:26:3.04:3,0,90	1/1:10,9:20:3.02:154,3,0	1/1:9,14:26:1.82:130,2,0	1/1:6,13:20:7.05:150,7,0	1/1:10,8:18:3.26:136,3,0	0/1:11,18:31:27.98:209,0,28	0/1:8,11:20:21.71:28,0,22	0/1:7,12:20:21.12:49,0,21	1/1:10,6:18:9.20:66,9,0	0/1:16,1:20:46.88:79,0,47	0/1:8,12:22:20.67:78,0,21	1/1:17,18:36:32.66:246,33,0	0/1:12,8:21:25.08:25,0,39	0/1:6,7:15:22.02:70,0,22
chr10	31546844	.	T	TTA	1352	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-6.569;DP=680;FS=10.372;HRun=0;HaplotypeScore=81.9365;InbreedingCoeff=0.9914;MQ=72.14;MQ0=0;MQRankSum=-0.400;QD=42.25;ReadPosRankSum=1.512;VQSLOD=4.9679;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:34:99:0,101,1491	0/0:6,0:6:18.04:0,18,248	0/0:20,0:20:50.77:0,51,683	0/0:16,0:15:41.05:0,41,476	0/0:29,0:28:84.10:0,84,1147	0/0:20,0:20:57.17:0,57,889	0/0:10,0:10:30.01:0,30,429	0/0:33,0:33:99:0,99,1467	1/1:0,31:32:72.25:1447,72,0	0/0:29,0:29:75.22:0,75,1192	0/0:19,0:19:57.16:0,57,850	0/0:22,0:22:63.20:0,63,1004	0/0:25,0:25:75.20:0,75,1110	0/0:21,0:21:63.12:0,63,908	0/0:17,0:17:51.11:0,51,720	0/0:24,0:24:69.17:0,69,1040	0/0:17,0:17:45.08:0,45,670	0/0:40,0:40:99:0,114,1587	0/0:28,0:28:81.20:0,81,1119	0/0:42,0:42:99:0,120,1813	0/0:14,0:14:42.07:0,42,601	0/0:20,0:20:60.15:0,60,877	0/0:25,0:25:75.21:0,75,1131	0/0:19,0:20:60.09:0,60,842	0/0:28,0:28:78.17:0,78,1191	0/0:35,0:36:99:0,107,1609	0/0:33,0:33:96.30:0,96,1491	0/0:20,0:20:60.09:0,60,842
chr10	31549200	.	C	CATGAATGAATGA	1202.58	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-1.712;DP=650;FS=0.000;HRun=0;HaplotypeScore=215.7661;InbreedingCoeff=0.8284;MQ=75.04;MQ0=0;MQRankSum=-4.998;QD=60.13;ReadPosRankSum=-2.840;VQSLOD=2.5904;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:84.28:0,84,2666	0/0:9,0:9:15.05:0,15,520	0/0:16,0:16:9.03:0,9,155	0/0:20,0:20:6:0,6,127	0/0:17,0:17:36.08:0,36,1067	0/0:39,0:39:78.25:0,78,2509	0/0:25,0:25:51.16:0,51,1625	0/0:22,0:22:24.07:0,24,614	1/1:13,7:20:24.08:1296,24,0	0/0:35,0:35:60.84:0,61,2038	0/0:15,0:15:30.10:0,30,1020	0/0:27,0:27:45.15:0,45,1561	0/0:29,0:30:66.23:0,66,2159	0/0:18,0:18:39.13:0,39,1352	0/0:37,0:37:84.27:0,84,2767	0/0:21,0:21:45.15:0,45,1460	0/0:26,0:26:57.20:0,57,1896	0/0:10,0:10:21.07:0,21,664	0/0:28,0:27:45.13:0,45,1219	0/0:16,0:16:42.13:0,42,1317	0/0:41,0:41:81.24:0,81,2542	0/0:21,0:21:39.13:0,39,1309	0/0:20,0:20:42.13:0,42,1377	0/0:20,0:20:33.11:0,33,1066	0/0:15,0:15:30.10:0,30,997	0/0:17,0:17:36.12:0,36,1249	0/0:31,0:30:57.17:0,57,1757	0/0:12,0:12:15.05:0,15,520
chr10	31549253	.	T	TTTTTGTTGTTG	1170.68	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=0.358;DP=501;FS=0.000;HRun=0;HaplotypeScore=158.4051;InbreedingCoeff=0.8889;MQ=76.27;MQ0=0;MQRankSum=-5.041;QD=83.62;ReadPosRankSum=-0.051;VQSLOD=3.5414;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:25:54.77:0,55,1796	0/0:7,0:7:21.07:0,21,621	0/0:17,0:18:26.50:0,27,665	0/0:17,0:16:24.55:0,25,516	0/0:12,0:12:30.10:0,30,954	0/0:26,0:26:63.22:0,63,2104	0/0:19,0:19:51.12:0,51,1217	0/0:24,0:24:54.12:0,54,1596	1/1:7,7:14:29.98:1265,30,0	0/0:27,0:27:69.24:0,69,2280	0/0:8,0:8:18.05:0,18,479	0/0:25,0:25:69.19:0,69,2090	0/0:21,0:21:57.16:0,57,1806	0/0:17,0:17:45.13:0,45,1349	0/0:34,0:34:87.25:0,87,2553	0/0:16,0:16:36.12:0,36,1162	0/0:19,0:19:54.19:0,54,1693	0/0:20,0:20:57.14:0,57,1645	0/0:25,0:25:51.10:0,51,1379	0/0:10,0:10:27.09:0,27,870	0/0:27,0:27:75.26:0,75,2449	0/0:11,0:11:30.10:0,30,896	0/0:10,0:10:27.08:0,27,777	0/0:12,0:12:33.10:0,33,971	0/0:11,0:11:27.09:0,27,862	0/0:18,0:18:45.15:0,45,1299	0/0:24,0:23:53.10:0,53,1806	0/0:3,0:3:6.02:0,6,201
chr10	31549384	.	GCT	G	54.75	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.815;DP=335;FS=0.000;HRun=0;HaplotypeScore=45.7834;InbreedingCoeff=0.6722;MQ=63.31;MQ0=13;MQRankSum=-3.137;QD=6.84;ReadPosRankSum=0.293;VQSLOD=2.7306;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:26:74.97:0,75,1175	0/0:4,0:4:11.95:0,12,150	0/0:10,0:9:20.47:0,20,299	0/0:3,0:2:2.98:0,3,22	0/0:9,0:9:27.07:0,27,454	0/0:17,0:16:45.12:0,45,648	0/0:6,0:6:15.04:0,15,202	0/0:14,0:15:36.19:0,36,293	1/1:2,6:7:9:138,9,0	0/0:10,0:9:27.06:0,27,442	0/0:10,0:10:27.03:0,27,446	0/0:10,0:10:29.93:0,30,510	0/0:9,0:8:23.99:0,24,300	0/0:4,0:3:9.03:0,9,172	0/0:20,0:21:56.99:0,57,883	0/0:8,0:8:24.05:0,24,407	0/0:15,0:13:33.07:0,33,576	0/0:25,0:22:59.61:0,60,965	0/0:12,0:9:26.97:0,27,230	0/0:18,0:16:30.79:0,31,291	0/0:12,0:11:13.04:0,13,137	0/0:11,0:11:21.53:0,22,452	0/0:9,0:9:21.04:0,21,382	0/0:17,0:17:32.92:0,33,566	0/0:8,0:7:18.04:0,18,324	0/0:11,0:11:33.06:0,33,464	0/0:18,0:17:34.25:0,34,336	0/0:5,0:5:12.04:0,12,231
chr10	31549385	.	CT	C	614.90	PASS	AB=0.906;AC=15;AF=0.278;AN=54;BaseQRankSum=3.627;DP=354;FS=1.983;HRun=13;HaplotypeScore=46.0186;InbreedingCoeff=0.7033;MQ=59.93;MQ0=18;MQRankSum=-0.374;QD=5.54;ReadPosRankSum=0.260;VQSLOD=1.4333;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:27:53.53:0,54,496	0/0:0,0:4:8.52:0,9,43	0/0:10,0:9:5.42:0,5,72	./.	0/0:10,0:10:21.03:0,21,204	0/0:12,0:22:52.22:0,52,328	0/0:3,0:7:14.79:0,15,77	1/1:8,7:15:17.12:130,17,0	1/1:8,0:7:6.08:19,6,0	0/1:9,1:9:0.88:1,0,154	0/0:8,0:9:23.83:0,24,209	0/0:13,0:12:29.85:0,30,268	0/0:11,0:10:17.88:0,18,145	0/0:7,0:4:9.01:0,9,88	0/0:20,1:21:26.02:0,26,387	0/0:9,0:9:18.03:0,18,175	0/0:14,1:13:8.14:0,8,241	0/0:25,1:22:29.21:0,29,437	1/1:7,5:9:14.90:109,15,0	1/1:3,14:16:34.51:246,35,0	1/1:6,4:10:7.99:50,8,0	0/0:8,0:10:17.03:0,17,183	0/0:9,0:9:18.03:0,18,175	0/0:18,0:18:27.04:0,27,263	0/1:8,1:8:3.88:4,0,128	0/1:9,1:10:3.94:4,0,117	1/1:6,11:17:31.85:225,32,0	0/0:8,0:7:12.02:0,12,117
chr10	31550267	.	A	AAAGAAG	3564.40	PASS	AB=0.694;AC=39;AF=0.813;AN=48;BaseQRankSum=1.812;DP=595;FS=0.000;HRun=0;HaplotypeScore=121.1582;InbreedingCoeff=0.5776;MQ=64.51;MQ0=9;MQRankSum=-1.505;QD=8.23;ReadPosRankSum=-1.424;VQSLOD=2.3929;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:22:12.04:248,12,0	1/1:9,0:8:8.92:106,9,0	./.	./.	1/1:29,0:27:13.76:189,14,0	1/1:22,0:20:6:117,6,0	1/1:25,0:22:8.85:56,9,0	./.	./.	0/0:22,0:21:6.02:0,6,116	0/0:24,0:23:11.90:0,12,164	1/1:30,0:29:18.05:374,18,0	1/1:15,0:25:22.97:135,23,0	1/1:22,0:28:14.45:83,14,0	1/1:25,0:25:9:130,9,0	1/1:22,0:22:9.02:185,9,0	1/1:28,0:28:16.41:361,16,0	0/0:24,0:24:15.05:0,15,290	1/1:13,0:12:3.01:62,3,0	1/1:21,0:18:15.04:305,15,0	1/1:13,0:13:12:139,12,0	1/1:19,3:24:6.02:178,6,0	0/0:17,0:17:9.02:0,9,127	1/1:14,0:14:7.19:50,7,0	1/1:9,3:19:3.01:94,3,0	0/1:14,0:25:28.15:459,0,28	1/1:29,0:27:12.50:228,12,0	1/1:4,0:6:8.89:66,9,0
chr10	31552047	.	G	GATT	2162.46	PASS	AB=0.719;AC=29;AF=0.630;AN=46;BaseQRankSum=-2.980;DP=218;FS=2.089;HRun=0;HaplotypeScore=33.4696;InbreedingCoeff=0.2582;MQ=86.32;MQ0=1;MQRankSum=0.957;QD=13.69;ReadPosRankSum=-1.800;VQSLOD=2.6009;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,4:5:9.03:174,9,0	0/0:3,0:4:5.99:0,6,61	./.	./.	1/1:6,4:10:9.03:174,9,0	0/0:7,0:7:15.05:0,15,199	0/0:7,0:7:9.01:0,9,99	1/1:28,0:28:26.93:354,27,0	0/0:1,0:5:8.93:0,9,63	./.	1/1:7,1:8:3.01:58,3,0	1/1:0,2:4:3.01:58,3,0	0/1:3,4:8:24.78:216,0,25	0/1:1,2:3:33.30:52,0,33	0/0:7,0:7:9.03:0,9,119	1/1:6,3:9:12.04:218,12,0	0/1:14,0:22:33.13:33,0,34	0/1:11,4:15:98.85:163,0,99	0/1:10,2:11:67.65:71,0,68	1/1:4,0:4:3.01:58,3,0	1/1:3,2:5:3.01:58,3,0	./.	0/0:2,0:2:3.01:0,3,40	1/1:1,1:2:3.01:58,3,0	1/1:4,2:6:6.02:116,6,0	1/1:5,4:9:15.05:287,15,0	1/1:5,2:8:9.03:172,9,0	./.
chr10	31552644	.	TA	T	206.17	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.538;DP=504;FS=0.000;HRun=8;HaplotypeScore=52.1956;InbreedingCoeff=0.6801;MQ=79.26;MQ0=0;MQRankSum=-1.947;QD=14.73;ReadPosRankSum=-0.472;VQSLOD=3.0013;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:75.22:0,75,894	0/0:8,0:8:24.07:0,24,290	0/0:16,0:16:39.06:0,39,424	0/0:8,0:8:18.64:0,19,175	0/0:28,0:28:75.23:0,75,906	0/0:19,0:19:54.17:0,54,652	0/0:10,0:10:30.08:0,30,352	0/0:35,1:36:58.28:0,58,975	1/1:3,11:14:0.70:281,1,0	0/0:19,0:19:54.17:0,54,652	0/0:25,0:25:69.21:0,69,832	0/0:18,0:18:48.15:0,48,580	0/0:14,0:14:36.11:0,36,435	0/0:27,0:27:75.23:0,75,905	0/0:22,0:22:63.18:0,63,749	0/0:20,0:20:57.16:0,57,675	0/0:19,0:19:51.16:0,51,616	0/0:18,0:18:54.12:0,54,636	0/0:17,0:17:45.14:0,45,544	0/0:19,0:19:54.17:0,54,652	0/0:9,0:9:21.05:0,21,241	0/0:17,0:17:45.14:0,45,544	0/0:12,0:12:33.09:0,33,388	0/0:11,0:11:30.09:0,30,362	0/0:14,0:14:42.13:0,42,505	0/0:21,0:21:60.18:0,60,724	0/0:20,0:20:57.17:0,57,687	0/0:16,0:16:48.15:0,48,579
chr10	31552965	.	T	TTTA	166.69	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.801;DP=637;FS=4.258;HRun=0;HaplotypeScore=89.2663;InbreedingCoeff=0.9796;MQ=85.72;MQ0=0;MQRankSum=-3.137;QD=23.81;ReadPosRankSum=-0.113;VQSLOD=2.8926;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,120,2237	0/0:10,0:10:30.10:0,30,559	0/0:21,0:21:57.19:0,57,1007	0/0:21,0:21:63.05:0,63,1105	0/0:19,0:19:54.19:0,54,996	0/0:23,0:23:66.20:0,66,1169	0/0:30,0:30:90.29:0,90,1646	0/0:35,0:35:99:0,99,1780	1/1:3,4:7:14.09:254,14,0	0/0:21,0:21:63.22:0,63,1172	0/0:15,0:15:45.15:0,45,839	0/0:28,0:28:84.27:0,84,1527	0/0:32,0:32:96.33:0,96,1780	0/0:22,0:22:66.23:0,66,1229	0/0:30,0:30:90.31:0,90,1670	0/0:16,0:16:48.15:0,48,864	0/0:27,0:27:78.25:0,78,1411	0/0:24,0:24:69.17:0,69,1218	0/0:21,0:21:60.18:0,60,1029	0/0:19,0:19:54.19:0,54,1005	0/0:20,0:20:60.21:0,60,1118	0/0:19,0:19:57.20:0,57,1062	0/0:18,0:18:54.17:0,54,968	0/0:16,0:16:48.16:0,48,895	0/0:26,0:26:75.26:0,75,1398	0/0:23,0:23:69.23:0,69,1249	0/0:26,0:26:78.27:0,78,1453	0/0:28,0:28:84.29:0,84,1565
chr10	31552966	.	G	GGTTT	199.70	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.007;DP=638;FS=1.623;HRun=0;HaplotypeScore=102.6865;InbreedingCoeff=0.9835;MQ=86.81;MQ0=0;MQRankSum=-2.031;QD=33.28;ReadPosRankSum=-0.319;VQSLOD=3.6665;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,120,2510	0/0:10,0:10:30.10:0,30,616	0/0:22,0:22:56.34:0,56,1153	0/0:22,0:22:62.80:0,63,1207	0/0:19,0:19:54.17:0,54,1093	0/0:23,0:23:66.20:0,66,1306	0/0:30,0:30:90.30:0,90,1820	0/0:35,0:35:99:0,102,1934	1/1:2,4:6:15.04:288,15,0	0/0:21,0:21:63.21:0,63,1286	0/0:15,0:15:45.15:0,45,941	0/0:28,0:28:84.26:0,84,1684	0/0:32,0:32:96.30:0,96,1922	0/0:22,0:22:66.23:0,66,1356	0/0:30,0:30:90.28:0,90,1811	0/0:16,0:16:48.15:0,48,968	0/0:27,0:27:81.20:0,81,1525	0/0:22,0:22:63.22:0,63,1320	0/0:21,0:21:57.18:0,57,1106	0/0:19,0:19:54.17:0,54,1093	0/0:20,0:20:60.21:0,60,1228	0/0:19,0:19:57.20:0,57,1177	0/0:19,0:19:54.16:0,54,1041	0/0:16,0:16:48.16:0,48,1006	0/0:26,0:26:78.25:0,78,1595	0/0:24,0:24:69.21:0,69,1329	0/0:26,0:26:78.27:0,78,1618	0/0:28,0:28:84.29:0,84,1759
chr10	31554096	.	C	CAT	420.62	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=-0.282;DP=633;FS=4.195;HRun=0;HaplotypeScore=108.4211;InbreedingCoeff=0.8088;MQ=64.32;MQ0=0;MQRankSum=0.179;QD=11.68;ReadPosRankSum=1.665;VQSLOD=2.9264;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:45.15:0,45,590	0/0:6,0:6:18.03:0,18,205	1/1:5,0:2:2.04:6,2,0	0/1:15,0:11:0:0,0,0	0/0:39,0:39:99:0,108,1323	0/0:31,0:31:81.19:0,81,989	0/0:16,0:16:45.12:0,45,562	0/0:48,0:48:99:0,129,1580	1/1:2,13:16:30.10:514,30,0	0/0:34,0:34:87.21:0,87,1075	0/0:26,0:26:72.22:0,72,927	0/0:32,0:32:93.28:0,93,1188	0/0:26,0:26:72.19:0,72,912	0/0:16,0:16:45.13:0,45,575	0/0:29,0:29:78.19:0,78,963	0/0:24,0:24:72.22:0,72,931	0/0:13,0:13:36.09:0,36,442	0/0:21,0:21:51.10:0,51,628	0/0:15,0:14:39.11:0,39,498	0/0:31,0:31:84.23:0,84,1057	0/0:23,0:23:63.12:0,63,750	0/0:26,0:26:66.17:0,66,821	0/0:26,0:26:69.15:0,69,842	0/0:13,0:13:36.10:0,36,457	0/0:21,0:21:57.16:0,57,719	0/0:27,0:27:72.23:0,72,934	0/0:36,0:36:93.12:0,93,1176	0/0:3,0:3:9.03:0,9,118
chr10	31556571	.	AT	A	140.31	PASS	AB=0.889;AC=3;AF=0.054;AN=56;BaseQRankSum=4.849;DP=490;FS=3.644;HRun=11;HaplotypeScore=49.8126;InbreedingCoeff=0.3734;MQ=69.62;MQ0=1;MQRankSum=-0.171;QD=6.68;ReadPosRankSum=0.203;VQSLOD=1.4137;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,1:22:29.48:0,29,505	0/0:8,0:8:15.04:0,15,160	0/0:13,0:11:16.67:0,17,118	0/0:14,0:9:6.35:0,6,75	0/0:23,0:23:69.17:0,69,736	0/0:21,0:21:54.14:0,54,576	0/0:14,1:15:17.48:0,17,383	0/0:28,0:29:68.99:0,69,706	1/1:2,11:13:0.98:214,1,0	0/0:15,0:15:36.09:0,36,383	0/0:19,1:20:26.49:0,26,487	0/0:20,0:20:60.14:0,60,633	0/0:14,0:14:42.05:0,42,428	0/0:17,0:17:51.10:0,51,534	0/0:19,0:20:44.98:0,45,462	0/0:21,0:21:57.14:0,57,608	0/0:34,0:34:90.23:0,90,960	0/0:16,0:16:39.05:0,39,398	0/0:15,0:15:33.08:0,33,352	0/0:14,0:14:36.09:0,36,384	0/0:10,0:10:30.08:0,30,320	0/1:7,1:8:9.60:10,0,109	0/0:14,0:14:33.08:0,33,352	0/0:6,0:6:15.04:0,15,160	0/0:25,0:25:60.15:0,60,640	0/0:22,0:23:54.05:0,54,552	0/0:24,0:24:54.14:0,54,575	0/0:16,0:16:42.11:0,42,448
chr10	31557604	.	TC	T	816.19	PASS	AB=0.820;AC=11;AF=0.196;AN=56;BaseQRankSum=-3.679;DP=291;FS=7.905;HRun=10;HaplotypeScore=38.2432;InbreedingCoeff=0.4438;MQ=66.35;MQ0=0;MQRankSum=1.669;QD=10.33;ReadPosRankSum=1.692;VQSLOD=1.4189;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:19.90:0,20,178	1/1:5,2:7:11.85:92,12,0	0/1:9,1:6:18:18,0,31	0/0:9,0:8:16.95:0,17,125	0/0:4,0:4:3.46:0,3,24	1/1:4,8:12:20.99:182,21,0	1/1:7,18:26:50.02:421,50,0	0/0:12,0:12:4.20:0,4,42	1/1:4,6:10:23.99:207,24,0	0/0:7,0:7:6:0,6,58	0/0:5,0:5:6:0,6,56	0/0:16,0:16:38.56:0,39,348	0/0:11,0:11:23.02:0,23,206	0/0:11,0:11:26.81:0,27,237	0/0:5,0:5:12.91:0,13,129	0/1:4,1:6:20.97:21,0,36	0/0:22,2:24:10.52:0,11,469	0/0:17,0:17:35.09:0,35,315	0/0:7,0:7:6:0,6,57	0/0:3,0:3:3.46:0,3,25	0/0:8,0:12:2.99:0,3,23	0/0:7,0:7:7.83:0,8,71	0/0:3,1:4:2.96:0,3,19	0/0:15,1:16:9.03:0,9,280	0/1:6,2:8:37.40:37,0,73	0/0:10,0:10:12.01:0,12,117	0/0:7,0:11:20.28:0,20,120	0/0:7,0:7:15:0,15,145
chr10	31558663	.	GC	G	8335.35	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=14.025;DP=523;FS=1.902;HRun=6;HaplotypeScore=50.9432;InbreedingCoeff=0.9986;MQ=82.17;MQ0=0;MQRankSum=-4.185;QD=29.25;ReadPosRankSum=5.797;VQSLOD=4.8922;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,19:20:54.14:580,54,0	0/0:8,0:8:24.08:0,24,316	0/0:18,0:18:51.16:0,51,654	0/0:14,0:14:22.54:0,23,288	1/1:2,23:25:63.15:677,63,0	0/0:36,0:36:99:0,99,1259	0/0:7,0:7:21.07:0,21,276	0/0:38,0:38:99:0,105,1358	0/0:13,0:13:36.12:0,36,473	1/1:1,24:25:72.17:768,72,0	1/1:2,20:22:60.15:645,60,0	1/1:0,14:14:42.11:451,42,0	1/1:0,15:15:45.11:484,45,0	1/1:1,14:15:39.10:419,39,0	0/0:18,0:18:54.18:0,54,710	1/1:1,15:16:45.11:484,45,0	1/1:0,14:14:30.08:322,30,0	1/1:1,16:17:42.10:450,42,0	0/0:24,0:24:69.21:0,69,881	0/0:20,0:20:57.17:0,57,732	0/0:18,0:18:51.17:0,51,671	1/1:0,11:11:33.08:355,33,0	1/1:1,21:22:60.62:645,61,0	1/1:1,14:15:39.10:419,39,0	1/1:0,19:19:57.14:613,57,0	1/1:3,17:20:51.11:539,51,0	0/0:24,0:23:69.18:0,69,861	1/1:0,15:15:45.11:484,45,0
chr10	31562113	.	ACTCCTGAGAATTG	A	29096.73	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=19.069;DP=550;FS=1.798;HRun=0;HaplotypeScore=221.5174;InbreedingCoeff=0.9840;MQ=79.27;MQ0=0;MQRankSum=-18.389;QD=105.42;ReadPosRankSum=4.995;VQSLOD=4.8971;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,23:23:60.21:2231,60,0	0/0:14,0:14:42.14:0,42,2628	0/0:24,0:24:72.25:0,72,4423	0/0:13,0:13:39.13:0,39,2262	1/1:0,21:21:63.18:2270,63,0	0/0:33,0:33:99:0,99,5909	0/0:17,0:17:51.18:0,51,3207	0/0:30,0:30:90.31:0,90,5587	0/0:27,0:27:81.26:0,81,5242	1/1:0,13:13:39.13:1560,39,0	1/1:0,26:26:75.17:2405,75,0	1/1:0,20:20:57.20:2340,57,0	1/1:0,25:25:69.24:2837,69,0	1/1:0,17:17:45.15:1860,45,0	0/0:32,0:32:96.31:0,96,6112	1/1:0,24:24:57.20:2371,57,0	1/1:0,10:10:24.08:940,24,0	1/1:0,9:9:21.07:880,21,0	0/0:16,0:16:48.16:0,48,2974	0/0:33,0:33:99:0,99,6063	0/0:13,0:13:39.13:0,39,2466	1/1:0,15:15:42.14:1598,42,0	1/1:0,21:21:60.63:2259,61,0	1/1:0,13:13:21.07:859,21,0	1/1:0,21:21:60.21:2501,60,0	1/1:1,15:16:48.16:1935,48,0	0/0:22,0:22:66.23:0,66,4088	1/1:0,2:2:6.02:252,6,0
chr10	31563262	.	A	ATG	21346.25	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=-17.975;DP=782;FS=15.953;HRun=0;HaplotypeScore=82.1429;InbreedingCoeff=0.9958;MQ=88.21;MQ0=1;MQRankSum=-3.480;QD=45.81;ReadPosRankSum=4.470;VQSLOD=5.0468;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,54:57:99:2646,148,0	0/0:12,0:12:36.12:0,36,504	0/0:28,0:28:83.95:0,84,1129	0/0:28,0:28:68.93:0,69,895	1/1:4,27:31:84.22:1438,84,0	0/0:27,0:27:75.23:0,75,1015	0/0:25,0:25:69.22:0,69,943	0/0:25,0:24:69.23:0,69,966	0/0:25,0:25:72.21:0,72,972	1/1:4,21:26:63.22:1121,63,0	1/1:3,20:23:48.16:864,48,0	1/1:2,18:20:48.16:864,48,0	1/1:1,25:26:69.24:1242,69,0	1/1:2,27:29:72.25:1296,72,0	0/0:39,0:39:99:0,108,1464	1/1:4,17:21:12.15:876,12,0	1/1:2,33:35:93.32:1674,93,0	1/1:1,29:30:75.26:1351,75,0	0/0:29,0:29:75.23:0,75,1019	0/0:19,0:19:54.18:0,54,756	0/0:34,0:34:99:0,102,1408	1/1:3,30:35:87.30:1566,87,0	1/1:1,22:23:65.03:1140,65,0	1/1:4,36:39:97.88:1733,98,0	1/1:2,20:23:57.20:1027,57,0	1/1:0,26:26:78.27:1376,78,0	0/0:25,0:24:72.21:0,72,972	1/1:0,21:21:63.22:1134,63,0
chr10	31563901	.	CTCA	C	605.20	PASS	AB=0.941;AC=3;AF=0.054;AN=56;BaseQRankSum=5.811;DP=549;FS=0.930;HRun=0;HaplotypeScore=76.7541;InbreedingCoeff=0.7347;MQ=83.55;MQ0=0;MQRankSum=-2.417;QD=18.34;ReadPosRankSum=1.371;VQSLOD=3.5246;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:84.29:0,84,1784	0/0:7,0:7:21.07:0,21,472	0/0:21,0:21:11.78:0,12,862	0/0:16,0:15:42.12:0,42,836	0/0:27,0:27:78.27:0,78,1711	0/0:29,0:29:87.30:0,87,1936	0/0:9,0:9:27.09:0,27,570	0/0:25,0:25:63.22:0,63,1407	1/1:2,15:17:42.14:700,42,0	0/0:30,0:30:87.30:0,87,1897	0/0:21,0:21:60.21:0,60,1292	0/0:16,0:16:48.16:0,48,1034	0/0:29,0:29:81.26:0,81,1709	0/0:16,0:16:48.16:0,48,1034	0/0:14,0:14:36.12:0,36,773	0/1:15,1:16:1.82:2,0,929	0/0:22,0:22:62.84:0,63,1373	0/0:13,0:13:36.12:0,36,724	0/0:16,0:16:42.14:0,42,902	0/0:22,0:22:60.21:0,60,1348	0/0:18,0:18:51.18:0,51,1145	0/0:20,0:20:57.20:0,57,1271	0/0:26,0:26:78.27:0,78,1693	0/0:19,0:19:54.19:0,54,1176	0/0:16,0:16:48.16:0,48,1079	0/0:17,0:17:51.16:0,51,1061	0/0:26,0:26:75.26:0,75,1675	0/0:12,0:12:36.12:0,36,809
chr10	31573415	.	C	CT	5883.68	PASS	AB=0.571;AC=32;AF=0.593;AN=54;BaseQRankSum=-1.807;DP=437;FS=9.179;HRun=10;HaplotypeScore=55.6705;InbreedingCoeff=0.7487;MQ=51.41;MQ0=8;MQRankSum=-1.166;QD=20.29;ReadPosRankSum=2.510;VQSLOD=5.6538;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:8,20:29:19.96:408,0,20	0/0:8,0:8:23.97:0,24,197	0/0:12,0:7:8.95:0,9,74	./.	1/1:2,24:26:57.13:600,57,0	0/0:7,0:7:17.95:0,18,145	0/0:9,0:9:17.97:0,18,148	0/0:15,1:16:3.96:0,4,239	1/1:5,11:16:27.07:288,27,0	0/1:3,13:18:8.17:351,0,8	1/1:1,12:14:24.06:256,24,0	1/1:3,15:17:36.09:384,36,0	1/1:0,5:5:12.01:128,12,0	1/1:0,12:12:18.05:191,18,0	0/0:15,0:15:29.95:0,30,246	1/1:1,11:12:36.05:371,36,0	1/1:3,7:10:21.05:221,21,0	1/1:3,13:16:19.83:365,20,0	0/0:16,0:12:35.96:0,36,295	0/0:19,0:19:53.92:0,54,443	0/0:18,0:18:23.91:0,24,197	1/1:3,15:17:27.50:288,28,0	1/1:7,16:24:0.86:408,1,0	1/1:1,10:11:5.44:263,5,0	1/1:1,21:22:39.10:416,39,0	1/1:2,23:25:66.13:683,66,0	0/0:16,0:16:44.93:0,45,369	1/1:3,11:13:5.43:263,5,0
chr10	31579566	.	ATG	A	4920.30	PASS	AB=0.749;AC=44;AF=0.786;AN=56;BaseQRankSum=4.674;DP=610;FS=7.010;HRun=0;HaplotypeScore=90.6404;InbreedingCoeff=0.2454;MQ=63.59;MQ0=17;MQRankSum=0.236;QD=9.82;ReadPosRankSum=1.563;VQSLOD=3.7871;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,6:20:13.40:142,13,0	1/1:1,0:11:17.98:80,18,0	0/0:38,0:11:0:0,0,0	0/0:48,0:16:11.78:0,12,95	1/1:8,13:21:36.09:398,36,0	1/1:7,0:20:18.78:84,19,0	0/1:12,0:23:9.19:38,0,9	0/1:19,4:23:35.03:52,0,35	1/1:8,1:22:28.58:159,29,0	1/1:19,11:30:27.06:295,27,0	1/1:3,7:12:17.71:163,18,0	0/1:7,0:8:30.17:101,0,30	1/1:5,8:13:18.05:203,18,0	1/1:8,4:13:14.87:150,15,0	0/0:21,0:23:54.11:0,54,740	1/1:7,9:16:15.04:170,15,0	1/1:16,11:27:17.40:365,17,0	0/1:5,4:9:24.94:25,0,46	1/1:9,3:12:8.95:102,9,0	1/1:11,14:25:24.06:265,24,0	1/1:19,12:30:9.03:102,9,0	0/1:19,9:28:99:134,0,231	1/1:8,15:23:27.08:305,27,0	0/1:12,17:29:6.57:303,0,7	1/1:8,14:23:38.94:421,39,0	1/1:17,12:30:38.85:383,39,0	1/1:7,14:23:44.62:445,45,0	1/1:3,5:8:3.01:34,3,0
chr10	31580477	.	T	TTCTCTC	1330.65	PASS	AB=1.000;AC=10;AF=0.179;AN=56;BaseQRankSum=0.468;DP=627;FS=14.804;HRun=0;HaplotypeScore=138.0080;InbreedingCoeff=0.6332;MQ=52.50;MQ0=17;MQRankSum=-4.865;QD=12.67;ReadPosRankSum=-5.301;VQSLOD=-0.2920;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:28.34:0,28,890	0/1:6,0:6:11.89:12,0,48	0/0:49,0:14:14.52:0,15,252	0/0:56,0:21:5.46:0,5,72	0/0:28,0:29:39.01:0,39,806	0/0:18,0:18:30.10:0,30,565	0/0:22,0:22:45.12:0,45,839	1/1:27,0:26:26.99:463,27,0	0/0:19,0:19:32.14:0,32,628	0/0:26,0:26:16.25:0,16,710	0/0:26,0:24:24.46:0,24,451	0/0:22,0:25:12.04:0,12,657	0/0:16,0:15:21.07:0,21,441	0/0:17,0:17:36.12:0,36,700	0/0:15,0:17:39.11:0,39,744	0/0:12,0:12:18.06:0,18,365	0/0:19,0:19:14.03:0,14,432	0/0:11,0:12:21.07:0,21,417	1/1:10,5:16:24.55:580,25,0	1/1:20,1:22:12.04:287,12,0	0/1:14,0:13:29.83:30,0,35	0/0:19,0:18:1.67:0,2,393	0/0:22,0:22:24.08:0,24,490	0/0:16,0:16:27.06:0,27,465	0/0:24,0:26:17.35:0,17,301	0/0:33,0:34:77.66:0,78,1418	1/1:10,8:19:5.98:117,6,0	0/0:8,0:8:8.99:0,9,122
chr10	31580506	.	C	CGTGT	2796.40	PASS	AB=0.837;AC=41;AF=0.788;AN=52;BaseQRankSum=0.542;DP=496;FS=0.000;HRun=0;HaplotypeScore=102.3201;InbreedingCoeff=-0.1606;MQ=49.88;MQ0=11;MQRankSum=0.639;QD=5.87;ReadPosRankSum=1.235;VQSLOD=1.8624;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:33,1:33:47.36:239,0,47	1/1:1,2:3:3.01:66,3,0	./.	./.	1/1:30,0:30:8.99:107,9,0	0/1:13,7:20:19.75:73,0,20	0/1:25,0:25:35.08:147,0,35	1/1:21,0:20:7.80:58,8,0	0/1:10,6:16:57.02:196,0,57	1/1:22,0:20:13.74:150,14,0	1/1:23,1:22:14.60:151,15,0	1/1:17,0:17:6.01:88,6,0	1/1:7,5:13:3.01:69,3,0	1/1:7,8:16:5.75:83,6,0	0/1:15,0:22:7.15:7,0,39	0/1:10,0:10:0:0,0,0	0/1:15,1:16:65.92:310,0,66	1/1:10,1:13:11.65:107,12,0	1/1:13,0:12:4.83:55,5,0	0/1:8,0:13:0:0,0,0	1/1:17,0:16:1.36:3,1,0	1/1:14,0:14:8.43:70,8,0	0/1:20,0:19:1.53:140,0,2	0/1:14,12:27:35.07:114,0,35	1/1:7,3:19:3.01:71,3,0	1/1:31,2:33:17.97:480,18,0	1/1:8,0:9:5.75:75,6,0	0/1:3,2:5:17.96:65,0,18
chr10	31580521	.	G	GTGTG	2799.21	PASS	AB=1.000;AC=42;AF=0.808;AN=52;BaseQRankSum=0.115;DP=474;FS=0.000;HRun=0;HaplotypeScore=97.3550;InbreedingCoeff=-0.1570;MQ=49.56;MQ0=13;MQRankSum=0.115;QD=6.17;ReadPosRankSum=0.778;VQSLOD=1.8181;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:34,0:32:47.36:239,0,47	1/1:4,0:4:3.01:66,3,0	./.	./.	1/1:19,9:29:8.99:107,9,0	0/1:17,0:17:19.75:73,0,20	0/1:21,0:21:35.08:147,0,35	1/1:23,0:22:10.50:64,11,0	0/1:17,0:16:57.02:196,0,57	1/1:19,0:17:13.08:149,13,0	1/1:22,0:21:14.60:151,15,0	1/1:16,0:16:6.01:88,6,0	1/1:11,0:10:3.01:69,3,0	1/1:15,0:14:5.75:83,6,0	1/1:22,0:22:2.74:13,3,0	0/1:8,0:8:0:0,0,0	0/1:16,0:16:65.92:310,0,66	1/1:14,0:13:11.65:107,12,0	1/1:12,0:11:5.30:56,5,0	0/1:16,0:16:0:0,0,0	1/1:19,0:18:1.36:3,1,0	1/1:14,0:14:8.43:70,8,0	0/1:18,0:17:1.53:140,0,2	0/1:27,0:27:35.07:114,0,35	1/1:18,0:18:3.01:71,3,0	1/1:27,0:27:7.29:466,7,0	1/1:11,0:11:5.75:75,6,0	0/1:4,0:4:17.96:65,0,18
chr10	31580995	.	C	CT	7037.85	PASS	AB=0.600;AC=33;AF=0.589;AN=56;BaseQRankSum=-11.401;DP=466;FS=3.332;HRun=9;HaplotypeScore=42.3117;InbreedingCoeff=0.8732;MQ=77.50;MQ0=0;MQRankSum=-3.061;QD=25.05;ReadPosRankSum=1.899;VQSLOD=5.4910;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,24:24:63.17:697,63,0	0/0:8,0:8:17.98:0,18,156	0/0:12,0:12:21.42:0,21,173	0/0:11,0:11:11.46:0,11,87	1/1:4,22:26:46.13:728,46,0	0/0:20,0:19:53.99:0,54,469	0/0:11,0:11:26.99:0,27,234	0/0:28,0:28:68.96:0,69,595	1/1:2,14:16:33.09:365,33,0	1/1:5,13:18:38.39:404,38,0	1/1:1,14:15:13.09:372,13,0	1/1:1,13:14:10.04:339,10,0	1/1:3,11:14:30.04:318,30,0	1/1:3,11:14:39.09:419,39,0	0/0:16,0:16:38.96:0,39,335	0/1:3,6:9:25.04:198,0,25	1/1:1,22:23:57.15:630,57,0	1/1:4,12:16:7.03:298,7,0	0/0:17,0:16:44.99:0,45,391	0/0:21,0:21:56.98:0,57,495	0/0:19,0:19:50.98:0,51,443	1/1:3,7:10:27.07:292,27,0	1/1:1,21:22:54.15:597,54,0	1/1:1,10:11:27.07:299,27,0	1/1:0,17:18:38.94:412,39,0	1/1:5,22:27:53.22:635,53,0	0/0:21,0:21:56.99:0,57,495	1/1:2,2:4:3.01:33,3,0
chr10	31582381	.	ACC	A	18648.59	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=16.100;DP=702;FS=0.900;HRun=2;HaplotypeScore=87.1448;InbreedingCoeff=0.9915;MQ=75.54;MQ0=0;MQRankSum=-2.663;QD=45.04;ReadPosRankSum=6.626;VQSLOD=4.6486;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,59:59:99:2769,172,0	0/0:11,0:11:33.11:0,33,670	0/0:22,0:23:66.42:0,66,1109	0/0:22,0:22:60.20:0,60,1092	1/1:0,21:21:63.18:1000,63,0	0/0:30,0:30:90.31:0,90,1815	0/0:26,0:26:78.27:0,78,1558	0/0:28,0:28:84.27:0,84,1610	1/1:0,26:26:66.23:1077,66,0	1/1:0,30:30:90.27:1390,90,0	1/1:0,11:11:33.11:538,33,0	1/1:0,26:26:66.23:1077,66,0	1/1:0,15:15:30.10:489,30,0	1/1:1,33:34:96.33:1559,96,0	0/0:42,0:42:99:0,126,2498	1/1:0,21:21:60.20:979,60,0	1/1:0,41:41:99:1755,108,0	1/1:0,32:32:84.29:1370,84,0	0/0:21,0:21:63.22:0,63,1280	0/0:27,0:27:78.27:0,78,1570	0/0:24,0:24:72.25:0,72,1463	1/1:0,28:28:81.26:1297,81,0	1/1:1,13:14:42.14:681,42,0	1/1:0,14:14:42.14:685,42,0	1/1:0,16:16:45.15:734,45,0	1/1:0,23:23:69.22:1101,69,0	0/0:34,0:34:99:0,102,2023	1/1:0,3:3:9.03:147,9,0
chr10	31583332	.	GTT	G	6160.95	PASS	AB=0.695;AC=48;AF=0.857;AN=56;BaseQRankSum=-5.702;DP=476;FS=4.926;HRun=15;HaplotypeScore=67.9862;InbreedingCoeff=0.4961;MQ=76.01;MQ0=1;MQRankSum=1.636;QD=14.10;ReadPosRankSum=4.375;VQSLOD=4.0823;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,18:21:38.83:387,39,0	1/1:1,0:9:22.13:99,22,0	0/0:30,0:14:9.05:0,9,174	0/1:22,0:15:1.66:2,0,95	1/1:0,14:16:22.37:291,22,0	1/1:0,1:14:36.18:179,36,0	1/1:2,0:9:19.34:86,19,0	1/1:10,19:31:53.42:497,53,0	1/1:2,14:16:32.97:291,33,0	1/1:3,17:20:50.88:445,51,0	1/1:5,19:24:50.82:446,51,0	1/1:3,10:15:6.41:151,6,0	1/1:7,10:18:17.55:144,18,0	0/1:4,4:9:20.94:41,0,21	0/0:7,0:9:15.51:0,16,182	1/1:3,10:14:20.84:229,21,0	1/1:0,13:14:32.74:276,33,0	1/1:2,13:15:21.89:253,22,0	1/1:10,16:27:46.89:420,47,0	1/1:11,16:32:30:473,30,0	1/1:3,8:11:20.96:185,21,0	1/1:5,6:11:15.13:153,15,0	1/1:4,9:14:14.79:173,15,0	1/1:1,5:6:11.99:106,12,0	0/1:3,12:16:2.76:184,0,3	1/1:4,12:16:32.19:310,32,0	0/1:5,10:17:0.52:133,0,1	1/1:8,9:20:6.93:209,7,0
chr10	31583592	.	TA	T	2141.34	PASS	AB=0.833;AC=12;AF=0.214;AN=56;BaseQRankSum=8.906;DP=490;FS=1.847;HRun=10;HaplotypeScore=56.1919;InbreedingCoeff=0.7993;MQ=77.82;MQ0=0;MQRankSum=0.007;QD=16.73;ReadPosRankSum=-1.895;VQSLOD=3.4886;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,1:35:64.06:0,64,925	0/0:1,0:5:14.37:0,14,90	0/0:19,0:18:8.65:0,9,166	0/1:8,2:10:2.83:3,0,24	0/0:16,0:16:38.95:0,39,404	0/0:5,0:26:54.30:0,54,300	0/0:3,0:13:25.57:0,26,128	1/1:0,29:29:86.90:736,87,0	0/0:10,0:10:24.06:0,24,265	0/0:26,0:26:78.20:0,78,848	0/0:20,0:20:44.84:0,45,497	0/0:13,0:13:33.09:0,33,365	0/0:12,2:14:13.03:0,13,362	0/0:19,0:19:48.11:0,48,520	0/0:16,1:17:16.04:0,16,397	0/0:23,0:23:69.17:0,69,753	0/0:12,0:12:30.08:0,30,332	0/0:23,0:23:63.16:0,63,687	1/1:2,17:19:53.94:457,54,0	1/1:3,18:21:50.97:442,51,0	1/1:17,0:17:40.47:173,40,0	0/0:11,0:11:33.09:0,33,364	0/0:16,0:16:42.10:0,42,455	0/0:15,0:15:42.11:0,42,464	0/0:10,0:10:30.05:0,30,313	0/0:17,1:18:16.04:0,16,391	1/1:5,22:26:56.85:495,57,0	0/1:4,1:5:14.02:14,0,88
chr10	31583602	.	AC	A	482.65	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=8.271;DP=502;FS=14.598;HRun=3;HaplotypeScore=62.8708;InbreedingCoeff=0.2849;MQ=74.04;MQ0=0;MQRankSum=0.182;QD=5.96;ReadPosRankSum=0.583;VQSLOD=-0.6306;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:95.02:0,95,1193	0/0:5,0:5:14.96:0,15,131	0/1:17,0:15:13.26:13,0,269	0/0:14,0:14:6.43:0,6,123	0/0:14,0:14:39.11:0,39,495	0/0:24,0:24:59.55:0,60,464	0/0:12,0:12:29.90:0,30,231	0/0:37,0:37:16.60:0,17,189	0/0:11,0:11:33.07:0,33,396	0/0:27,0:27:78.22:0,78,996	0/0:20,0:20:35.41:0,35,671	0/0:12,0:12:36.11:0,36,466	0/0:14,0:14:33.05:0,33,441	0/0:18,0:18:51.09:0,51,623	0/0:17,0:17:45.59:0,46,553	0/0:23,0:23:66.22:0,66,882	0/0:12,0:12:36.07:0,36,433	0/0:23,0:23:66.14:0,66,829	0/0:21,0:21:1.11:0,1,58	0/1:21,0:21:16.23:16,0,53	1/1:0,17:17:45.14:555,45,0	0/0:14,0:14:42.02:0,42,478	0/0:14,0:14:39.13:0,39,514	0/0:17,0:17:51.10:0,51,606	0/0:10,0:10:30.09:0,30,386	0/0:18,0:18:41.49:0,41,577	0/1:26,0:26:18.91:19,0,64	0/0:9,0:9:19.18:0,19,213
chr10	31583825	.	G	GGTGT	878.24	PASS	AB=0.874;AC=32;AF=0.640;AN=50;BaseQRankSum=-0.942;DP=550;FS=9.372;HRun=0;HaplotypeScore=113.8545;InbreedingCoeff=-0.0287;MQ=68.48;MQ0=15;MQRankSum=-0.143;QD=2.01;ReadPosRankSum=2.861;VQSLOD=1.0582;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:32:23.96:24,0,71	./.	./.	./.	0/1:17,0:18:26.69:27,0,35	1/1:16,0:20:2.74:13,3,0	0/1:23,0:31:15.97:16,0,37	1/1:27,0:24:3:25,3,0	0/0:12,0:21:6.47:0,6,54	1/1:24,0:23:8.34:64,8,0	0/1:15,0:15:2.54:3,0,116	0/0:16,0:16:8:0,8,53	0/0:11,0:10:4.35:0,4,17	1/1:14,0:14:3.01:42,3,0	0/1:13,0:13:16.88:51,0,17	1/1:14,0:14:6.01:86,6,0	0/1:28,0:36:27.48:27,0,161	0/1:12,0:20:39.27:39,0,97	1/1:16,0:16:4.72:21,5,0	0/0:17,0:17:0.47:0,0,1	0/1:36,0:33:1.42:1,0,81	1/1:6,0:6:6.02:103,6,0	1/1:16,0:16:9.03:178,9,0	0/1:14,18:36:14.20:131,0,14	1/1:14,0:14:3:25,3,0	0/1:16,0:16:0.07:47,0,0	1/1:17,0:22:8.68:53,9,0	1/1:8,0:7:3.01:42,3,0
chr10	31584994	.	T	TCAGAC	1792.25	PASS	AC=2;AF=0.037;AN=54;BaseQRankSum=-2.557;DP=632;FS=0.000;HRun=0;HaplotypeScore=119.3812;InbreedingCoeff=0.9988;MQ=95.94;MQ0=0;MQRankSum=-3.663;QD=71.69;ReadPosRankSum=0.457;VQSLOD=5.0240;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,102,2135	0/0:13,0:13:39.13:0,39,831	0/0:35,0:35:85.21:0,85,1693	0/0:25,0:25:71.92:0,72,1446	0/0:28,0:28:81.28:0,81,1716	0/0:24,0:24:72.21:0,72,1420	0/0:14,0:14:36.11:0,36,728	0/0:24,0:24:69.21:0,69,1361	0/0:26,0:26:69.24:0,69,1454	0/0:41,0:41:99:0,123,2609	0/0:17,0:17:45.15:0,45,945	0/0:22,0:22:60.20:0,60,1241	0/0:21,0:21:57.18:0,57,1164	0/0:24,0:24:72.23:0,72,1466	1/1:2,20:25:63.17:1887,63,0	0/0:19,0:19:54.19:0,54,1151	0/0:17,0:17:45.15:0,45,959	0/0:30,0:30:84.29:0,84,1768	./.	0/0:41,0:41:99:0,117,2469	0/0:24,0:24:69.24:0,69,1471	0/0:20,0:20:57.20:0,57,1186	0/0:18,0:18:54.19:0,54,1136	0/0:18,0:18:54.12:0,54,1067	0/0:24,0:24:69.24:0,69,1464	0/0:21,0:21:54.19:0,54,1124	0/0:17,0:17:51.18:0,51,1086	0/0:9,0:9:27.09:0,27,540
chr10	31585091	.	A	AT	449.17	PASS	AC=2;AF=0.037;AN=54;BaseQRankSum=1.960;DP=565;FS=1.906;HRun=8;HaplotypeScore=57.6589;InbreedingCoeff=0.8220;MQ=79.06;MQ0=0;MQRankSum=-2.195;QD=22.46;ReadPosRankSum=-1.326;VQSLOD=3.4680;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,99,906	0/0:12,0:12:33.02:0,33,302	0/0:17,1:18:38.75:0,39,338	0/0:11,0:10:1.74:0,2,88	0/0:32,0:32:84.03:0,84,768	0/0:22,0:22:57.03:0,57,522	0/0:19,0:19:39.01:0,39,357	0/0:39,0:39:90.03:0,90,821	0/0:19,0:19:47.98:0,48,429	0/0:24,0:24:59.77:0,60,533	0/0:19,0:19:42:0,42,384	0/0:23,0:23:66.04:0,66,604	0/0:19,0:19:54:0,54,489	0/0:17,0:17:42.02:0,42,384	1/1:6,14:20:26.68:543,27,0	0/0:15,0:15:42.01:0,42,380	0/0:15,0:15:42.02:0,42,382	0/0:21,0:21:63.02:0,63,572	./.	0/0:29,0:30:77.06:0,77,686	0/0:23,0:23:60.03:0,60,549	0/0:17,0:18:32.26:0,32,424	0/0:24,0:24:66.03:0,66,604	0/0:16,0:16:39.02:0,39,357	0/0:21,0:21:63.01:0,63,571	0/0:26,0:26:75.02:0,75,677	0/0:17,0:17:48.03:0,48,439	0/0:10,0:10:24:0,24,220
chr10	31586302	.	GCA	G	1625.20	PASS	AB=1.000;AC=25;AF=0.625;AN=40;BaseQRankSum=3.395;DP=297;FS=6.869;HRun=0;HaplotypeScore=92.8050;InbreedingCoeff=0.5310;MQ=54.23;MQ0=7;MQRankSum=-1.294;QD=11.53;ReadPosRankSum=4.542;VQSLOD=2.8904;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,1:13:3.01:31,3,0	1/1:9,0:8:2.84:14,3,0	0/1:4,0:2:6.11:6,0,8	0/0:6,0:4:1.01:0,1,7	./.	1/1:7,0:7:1.41:3,1,0	0/0:13,0:13:0.47:0,0,1	0/0:15,0:15:41.23:0,41,515	./.	1/1:1,14:15:33.97:433,34,0	./.	1/1:2,6:8:3.48:45,3,0	1/1:1,8:8:6.01:63,6,0	./.	1/1:0,4:4:3.01:44,3,0	0/0:0,7:7:0:0,0,0	1/1:9,6:14:15.03:165,15,0	1/1:2,11:12:12.04:152,12,0	./.	0/0:4,0:13:12.04:0,12,176	0/0:19,0:18:8.76:0,9,101	1/1:8,9:16:12.04:160,12,0	./.	./.	./.	1/1:12,4:16:4.38:500,4,0	0/0:3,0:7:8.04:0,8,72	1/1:3,8:10:11.56:141,12,0
chr10	31586306	.	GCACACACACACGCACACACACACACACACACACA	G	2107.15	PASS	AB=1.000;AC=24;AF=0.632;AN=38;BaseQRankSum=1.995;DP=283;FS=3.626;HRun=0;HaplotypeScore=181.4813;InbreedingCoeff=0.3038;MQ=53.60;MQ0=9;MQRankSum=0.522;QD=12.40;ReadPosRankSum=3.319;VQSLOD=2.3701;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,1:13:3.01:190,3,0	1/1:9,0:8:6.02:131,6,0	./.	0/0:6,0:4:0.34:0,0,1	./.	0/0:7,0:7:6.02:0,6,130	0/1:13,0:13:0:0,0,0	0/1:16,0:15:78.63:79,0,750	0/0:3,0:3:2.37:0,2,8	1/1:14,0:14:31.54:218,32,0	./.	1/1:5,1:6:3:25,3,0	1/1:9,1:8:5.95:263,6,0	./.	1/1:5,0:5:3:25,3,0	0/0:7,0:7:0.89:0,1,2	1/1:13,1:14:9.03:534,9,0	1/1:12,0:11:11.92:86,12,0	./.	./.	0/1:17,0:16:0:0,0,0	1/1:14,2:15:9.02:134,9,0	./.	./.	./.	0/1:14,0:14:99:208,0,338	0/0:6,0:6:3.01:0,3,167	1/1:9,1:9:14.86:327,15,0
chr10	31586408	.	A	AAC	5712.13	PASS	AB=0.528;AC=35;AF=0.648;AN=54;BaseQRankSum=0.639;DP=523;FS=4.946;HRun=0;HaplotypeScore=87.6543;InbreedingCoeff=0.8044;MQ=72.41;MQ0=26;MQRankSum=1.721;QD=18.67;ReadPosRankSum=1.508;VQSLOD=4.9511;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,28:30:3.01:39,3,0	0/0:11,0:11:33.11:0,33,490	0/0:40,0:24:11.54:0,12,637	0/0:49,0:23:47.13:0,47,697	1/1:5,15:21:30.09:375,30,0	0/0:15,0:15:38.74:0,39,465	0/0:19,0:19:47.80:0,48,641	0/0:26,0:25:66.19:0,66,937	1/1:3,7:10:3.01:53,3,0	1/1:4,16:19:45.09:661,45,0	1/1:7,0:7:12.04:199,12,0	1/1:9,0:9:27.08:388,27,0	1/1:8,1:9:23.97:344,24,0	1/1:14,2:16:39.13:620,39,0	1/1:12,0:16:42.14:635,42,0	1/1:9,0:9:18.06:284,18,0	0/1:2,17:19:2.71:145,0,3	1/1:2,20:21:9.03:160,9,0	./.	0/0:12,0:12:32.97:0,33,456	0/0:28,0:24:59.99:0,60,713	1/1:6,15:21:21.06:271,21,0	1/1:0,10:10:5.65:66,6,0	1/1:7,18:24:2.72:56,3,0	1/1:17,1:18:39.13:653,39,0	1/1:6,16:19:51.08:723,51,0	0/0:17,0:16:45.13:0,45,622	1/1:2,16:17:3.01:39,3,0
chr10	31587783	.	T	TACAC	15971.76	PASS	AB=0.594;AC=40;AF=0.714;AN=56;BaseQRankSum=-9.879;DP=591;FS=11.597;HRun=0;HaplotypeScore=93.7432;InbreedingCoeff=0.8321;MQ=62.52;MQ0=5;MQRankSum=-2.962;QD=37.58;ReadPosRankSum=3.697;VQSLOD=4.5532;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,12:23:29.70:614,30,0	1/1:4,7:12:26.61:495,27,0	0/0:28,0:21:29.55:0,30,518	0/0:27,0:23:30.13:0,30,495	0/1:11,19:31:4.08:975,0,4	1/1:5,14:19:36.12:879,36,0	1/1:11,7:20:13.79:442,14,0	0/0:28,0:28:45.11:0,45,648	1/1:9,12:22:30.57:732,31,0	1/1:9,15:25:54.12:1187,54,0	1/1:11,17:29:39.13:953,39,0	1/1:6,10:18:29.57:607,30,0	1/1:6,9:15:18.06:440,18,0	1/1:5,11:16:30.10:733,30,0	1/1:8,19:28:44.89:1038,45,0	1/1:4,15:19:45.15:1097,45,0	1/1:5,15:21:33.11:806,33,0	1/1:8,16:24:39.61:914,40,0	0/0:16,0:16:21.01:0,21,429	0/0:21,0:21:28.97:0,29,691	0/0:17,0:17:36.12:0,36,592	1/1:8,16:25:41.88:963,42,0	1/1:4,13:19:39.13:932,39,0	1/1:4,13:18:29.84:672,30,0	0/1:5,13:17:10.18:837,0,10	1/1:5,7:14:24.07:509,24,0	0/0:27,0:29:60.20:0,60,965	1/1:1,4:6:6.02:147,6,0
chr10	31589091	.	ATT	A	9909.10	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-7.227;DP=578;FS=5.956;HRun=11;HaplotypeScore=85.1948;InbreedingCoeff=0.9973;MQ=76.63;MQ0=5;MQRankSum=-3.567;QD=26.71;ReadPosRankSum=6.152;VQSLOD=4.8867;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,25:27:77.92:810,78,0	0/0:9,0:9:27.09:0,27,416	0/0:20,0:20:47.13:0,47,605	0/0:21,0:20:31.15:0,31,311	1/1:3,27:30:75.16:797,75,0	0/0:21,0:21:54.17:0,54,809	0/0:18,0:19:50.66:0,51,746	0/0:4,0:29:68.14:0,68,318	1/1:1,19:19:51.13:543,51,0	1/1:3,20:23:63.14:668,63,0	1/1:0,24:24:60.12:639,60,0	1/1:1,19:20:51.12:543,51,0	1/1:1,16:17:45.10:478,45,0	1/1:1,17:19:42.03:502,42,0	1/1:2,24:26:56.88:587,57,0	1/1:2,17:19:48.11:511,48,0	1/1:2,17:19:48.12:511,48,0	1/1:0,7:6:15.04:160,15,0	0/0:3,0:18:38.11:0,38,144	0/0:3,0:25:50.38:0,50,183	0/0:3,0:16:32.95:0,33,149	1/1:3,23:25:63.12:671,63,0	1/1:4,14:18:42.08:447,42,0	1/1:1,16:17:42.09:447,42,0	1/1:2,18:19:48.11:511,48,0	1/1:2,20:23:62.86:640,63,0	0/0:4,0:28:60.28:0,60,241	1/1:0,15:15:42.11:447,42,0
chr10	31589817	.	TA	T	8526.14	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=17.463;DP=614;FS=6.687;HRun=9;HaplotypeScore=94.2342;InbreedingCoeff=0.9670;MQ=70.36;MQ0=0;MQRankSum=-3.188;QD=23.23;ReadPosRankSum=4.682;VQSLOD=5.1102;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,32:35:98.80:890,99,0	0/0:6,0:6:15.04:0,15,173	0/0:27,0:23:54.14:0,54,605	0/0:23,0:20:35.88:0,36,364	1/1:3,21:24:62.91:560,63,0	0/0:21,0:21:57.16:0,57,648	0/0:25,0:25:69.19:0,69,787	0/0:28,0:28:81.19:0,81,889	0/0:13,0:13:39.11:0,39,447	1/1:7,19:26:45.69:502,46,0	1/1:2,23:25:72.02:655,72,0	1/1:3,18:21:51.02:467,51,0	1/1:1,22:23:60.03:549,60,0	1/1:4,20:24:60.02:549,60,0	0/0:13,0:13:30.05:0,30,323	1/1:1,11:12:1.40:267,1,0	1/1:3,38:41:99:898,99,0	1/1:1,19:20:48.03:439,48,0	0/0:19,0:19:51.12:0,51,569	0/0:25,0:25:75.20:0,75,849	0/0:13,0:13:36.11:0,36,415	1/1:3,19:22:57.03:521,57,0	1/1:4,17:21:51.02:467,51,0	1/1:3,16:19:53.42:463,53,0	1/1:4,14:18:44.51:394,45,0	1/1:1,24:25:72.04:659,72,0	0/0:34,0:34:96.24:0,96,1075	1/1:2,9:11:27.01:247,27,0
chr10	31590501	.	AGT	A	4486.10	PASS	AB=0.950;AC=37;AF=0.661;AN=56;BaseQRankSum=4.916;DP=730;FS=16.449;HRun=0;HaplotypeScore=111.5969;InbreedingCoeff=0.6345;MQ=56.74;MQ0=83;MQRankSum=2.935;QD=8.85;ReadPosRankSum=5.459;VQSLOD=3.3817;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,33:48:31.62:791,32,0	0/0:4,0:7:14.70:0,15,160	0/1:79,0:15:3.34:3,0,352	0/0:98,0:15:34.19:0,34,392	1/1:8,18:26:20.69:203,21,0	0/0:3,0:16:30:0,30,284	0/0:12,0:23:30.03:0,30,325	0/0:26,0:24:39.13:0,39,591	0/0:11,0:25:21:0,21,184	1/1:8,11:21:32.87:330,33,0	1/1:5,9:14:9.03:106,9,0	1/1:4,10:16:20.73:204,21,0	1/1:4,16:20:26.71:297,27,0	1/1:5,14:20:23.90:260,24,0	0/0:7,0:27:39:0,39,361	1/1:4,16:22:29.92:331,30,0	1/1:15,26:41:44.77:471,45,0	1/1:7,18:26:32.21:364,32,0	0/1:16,3:19:37.17:37,0,374	0/1:22,0:21:2.02:2,0,436	0/1:25,0:25:6.19:6,0,583	1/1:10,0:11:16.39:133,16,0	1/1:2,6:8:0.47:1,0,0	1/1:2,21:23:36.11:421,36,0	1/1:6,9:16:15.04:175,15,0	1/1:4,10:14:26.88:269,27,0	0/1:24,3:26:13.11:13,0,744	1/1:1,6:7:6.02:70,6,0
chr10	31591509	.	G	GTTA	24114.42	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=-14.580;DP=803;FS=12.090;HRun=0;HaplotypeScore=104.6695;InbreedingCoeff=0.9998;MQ=91.76;MQ0=0;MQRankSum=-7.011;QD=51.31;ReadPosRankSum=6.337;VQSLOD=6.4433;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,62:67:99:3626,166,0	0/0:11,0:11:30.09:0,30,459	0/0:32,0:32:74.41:0,74,1163	0/0:39,0:39:99:0,103,1478	1/1:5,18:25:51.17:1078,51,0	0/0:27,0:27:81.23:0,81,1229	0/0:26,0:26:63.21:0,63,1012	0/0:35,0:35:96.28:0,96,1452	0/0:28,0:28:72.23:0,72,1132	1/1:3,27:32:87.27:1818,87,0	1/1:3,17:20:54.10:1125,54,0	1/1:3,21:24:60.14:1263,60,0	1/1:4,19:26:48.10:982,48,0	1/1:4,20:24:54.19:1168,54,0	0/0:30,0:30:90.30:0,90,1424	1/1:3,20:23:47.90:1046,48,0	1/1:3,35:38:87.30:1919,87,0	1/1:0,17:18:39.13:861,39,0	0/0:17,0:17:45.14:0,45,695	0/0:26,0:26:72.24:0,72,1133	0/0:38,0:38:99:0,99,1543	1/1:1,31:32:84.29:1807,84,0	1/1:3,30:33:75.09:1593,75,0	1/1:2,24:26:51.65:1127,52,0	1/1:4,29:33:81.28:1761,81,0	1/1:3,35:38:99:2303,105,0	0/0:24,0:24:69.23:0,69,1087	1/1:1,10:11:30.10:639,30,0
chr10	31592058	.	T	TGTGTTCTTCTCTTATCAGGAA	22698.69	PASS	AB=0.840;AC=50;AF=0.926;AN=54;BaseQRankSum=-2.094;DP=198;FS=13.267;HRun=0;HaplotypeScore=225.9766;InbreedingCoeff=-0.0895;MQ=82.65;MQ0=0;MQRankSum=-1.460;QD=115.22;ReadPosRankSum=1.351;VQSLOD=3.4793;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:4:6.02:413,6,0	./.	0/1:5,0:10:1.36:1521,0,1	0/1:5,1:9:45.53:1116,0,46	1/1:7,0:7:15.05:740,15,0	1/1:12,0:12:24.96:1214,25,0	1/1:6,0:6:18.06:953,18,0	1/1:9,0:9:27.09:1235,27,0	1/1:8,0:8:18.03:887,18,0	1/1:6,0:6:15.94:753,16,0	1/1:7,0:7:15.05:735,15,0	1/1:9,0:9:15.05:901,15,0	1/1:5,0:5:14.98:721,15,0	1/1:7,0:7:18.02:762,18,0	1/1:4,0:4:6.02:380,6,0	1/1:7,0:7:5.19:663,5,0	1/1:7,0:7:15.05:883,15,0	1/1:7,0:7:15.87:699,16,0	1/1:7,0:7:21.06:917,21,0	1/1:6,0:6:15.05:858,15,0	0/1:6,0:6:12.92:459,0,13	1/1:5,0:5:15.05:980,15,0	1/1:10,0:10:24.08:1185,24,0	1/1:3,0:3:6.02:200,6,0	1/1:13,0:13:21.07:1288,21,0	1/1:9,0:9:24.08:981,24,0	1/1:10,0:10:18.06:923,18,0	0/1:4,0:4:4.17:334,0,4
chr10	31592059	.	G	GTGTTCTTCTCTTATTGAA	2013.36	PASS	AB=0.689;AC=28;AF=0.933;AN=30;BaseQRankSum=-2.585;DP=34;FS=6.368;HRun=0;HaplotypeScore=23.8428;InbreedingCoeff=-0.2396;MQ=143.06;MQ0=0;MQRankSum=-1.659;QD=71.91;ReadPosRankSum=-0.887;VQSLOD=1.8429;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/1:1,0:3:22.43:167,0,22	0/1:5,1:7:51.55:912,0,52	./.	./.	1/1:0,0:1:3.01:108,3,0	1/1:1,0:1:3.01:51,3,0	1/1:2,0:2:5.99:93,6,0	1/1:1,0:1:3.01:54,3,0	1/1:1,0:1:3.01:74,3,0	1/1:1,0:1:3.01:74,3,0	./.	1/1:1,0:1:2.97:20,3,0	./.	./.	./.	./.	1/1:2,0:2:6.01:79,6,0	1/1:1,0:1:3.01:72,3,0	1/1:1,0:1:3.01:61,3,0	./.	1/1:2,0:2:3.01:72,3,0	./.	./.	1/1:3,0:3:9.03:192,9,0	1/1:1,0:1:3.01:72,3,0	./.
chr10	31592119	.	C	CA	214.44	PASS	AB=0.500;AC=26;AF=0.722;AN=36;DP=78;FS=0.000;HRun=0;HaplotypeScore=39.6910;InbreedingCoeff=0.3906;MQ=28.91;MQ0=0;QD=3.06;VQSLOD=2.2407;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:0,5:5:0:0,0,0	0/1:0,2:2:0:0,0,0	./.	./.	./.	./.	0/1:0,10:10:0:0,0,0	1/1:0,9:9:23.22:93,23,0	./.	1/1:0,3:3:7.13:54,7,0	0/1:0,2:2:0:0,0,0	1/1:1,3:4:2.84:15,3,0	0/1:0,3:3:0:0,0,0	./.	0/1:0,6:6:0:0,0,0	0/1:0,3:3:0:0,0,0	1/1:0,1:1:0.47:1,0,0	1/1:0,2:2:3.06:7,3,0	1/1:0,2:2:1.55:4,2,0	./.	./.	0/1:0,4:4:0:0,0,0	0/1:0,1:1:0:0,0,0	./.	0/1:0,3:3:0:0,0,0	1/1:0,5:5:13.04:54,13,0	1/1:0,5:5:8.56:55,9,0	./.
chr10	31592299	.	TA	T	8110.89	PASS	AB=1.000;AC=54;AF=0.964;AN=56;BaseQRankSum=6.691;DP=529;FS=17.573;HRun=2;HaplotypeScore=192.6658;InbreedingCoeff=-0.0559;MQ=80.16;MQ0=0;MQRankSum=-3.213;QD=15.33;ReadPosRankSum=7.543;VQSLOD=2.8089;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:36,0:36:48.97:543,49,0	1/1:4,0:4:11.91:85,12,0	1/1:21,0:21:26.44:239,26,0	0/1:19,0:20:55.74:155,0,56	1/1:16,0:16:38.68:280,39,0	1/1:8,0:8:20.57:146,21,0	1/1:14,0:14:16.62:243,17,0	1/1:30,0:30:56.75:456,57,0	1/1:21,0:21:55.93:369,56,0	1/1:16,0:16:43.31:249,43,0	1/1:9,4:13:5.85:164,6,0	1/1:22,0:22:56.05:389,56,0	1/1:22,0:22:38.39:372,38,0	1/1:16,0:16:43.74:303,44,0	0/1:25,0:25:43.44:317,0,43	1/1:19,0:19:50:327,50,0	1/1:21,0:21:24.62:305,25,0	1/1:20,0:20:32.11:318,32,0	1/1:21,0:21:30.87:317,31,0	1/1:19,0:19:50.58:334,51,0	1/1:27,0:27:53.53:351,54,0	1/1:21,0:21:56.26:384,56,0	1/1:11,0:11:7.80:165,8,0	1/1:17,0:17:38.25:252,38,0	1/1:15,0:15:0.40:184,0,0	1/1:21,0:21:14.14:291,14,0	1/1:22,0:21:35.46:384,35,0	1/1:11,0:11:32.05:187,32,0
chr10	31593694	.	A	AT	1300.50	PASS	AB=1.000;AC=27;AF=0.643;AN=42;BaseQRankSum=-4.915;DP=160;FS=15.029;HRun=0;HaplotypeScore=41.0184;InbreedingCoeff=0.5619;MQ=68.96;MQ0=9;MQRankSum=1.298;QD=13.55;ReadPosRankSum=4.121;VQSLOD=3.2041;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,0:3:3.63:9,4,0	0/0:7,0:7:3.17:0,3,39	0/0:7,0:6:9.42:0,9,135	0/0:11,0:5:8.84:0,9,65	./.	0/0:13,0:13:18.71:0,19,133	0/0:9,0:9:4.28:0,4,33	1/1:4,16:17:45.12:595,45,0	0/0:9,0:9:12.02:0,12,122	1/1:6,0:6:1.16:8,1,0	1/1:2,0:2:4.07:12,4,0	./.	./.	./.	1/1:3,0:3:2.03:6,2,0	./.	1/1:10,0:9:5.95:20,6,0	0/1:8,0:8:0.89:1,0,2	1/1:3,3:4:12.02:134,12,0	1/1:6,0:6:8.22:23,8,0	1/1:1,9:10:4.21:153,4,0	0/0:2,0:2:4.19:0,4,21	./.	1/1:3,0:3:0.18:2,0,0	1/1:3,0:2:3.15:11,3,0	1/1:1,0:1:2.50:9,2,0	1/1:0,14:14:33.11:458,33,0	./.
chr10	31593705	.	ATATGTATATATATATATG	A	205.38	PASS	AB=1.000;AC=3;AF=0.100;AN=30;BaseQRankSum=0.886;DP=129;FS=0.000;HRun=0;HaplotypeScore=78.5579;InbreedingCoeff=0.3224;MQ=55.59;MQ0=13;MQRankSum=-2.324;QD=8.56;ReadPosRankSum=-0.193;VQSLOD=1.4577;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	0/0:4,0:4:2.99:0,3,24	0/0:4,0:3:6:0,6,176	0/0:9,0:3:9.03:0,9,161	0/0:2,0:2:3.01:0,3,47	./.	./.	0/0:23,0:18:51.15:0,51,1757	1/1:0,12:13:6.02:281,6,0	0/0:1,0:1:0.47:0,0,1	./.	./.	./.	./.	./.	./.	0/1:11,0:10:2.04:2,0,166	0/0:5,0:5:15:0,15,582	0/0:9,0:6:17.95:0,18,740	0/0:6,0:6:15.03:0,15,347	0/0:11,0:10:17.34:0,17,813	./.	./.	0/0:2,0:2:2.97:0,3,20	0/0:1,0:0:2.99:0,3,23	./.	0/0:13,0:13:33.03:0,33,1127	./.
chr10	31594181	.	CTTTT	C	7574.72	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-0.280;DP=504;FS=18.928;HRun=16;HaplotypeScore=96.7031;InbreedingCoeff=0.9744;MQ=68.60;MQ0=1;MQRankSum=-1.931;QD=24.36;ReadPosRankSum=7.546;VQSLOD=1.8283;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,33:44:79.22:1013,79,0	0/0:1,0:5:11.96:0,12,120	0/0:26,0:14:23.98:0,24,279	0/0:17,0:12:11.36:0,11,178	1/1:6,10:17:28.08:338,28,0	0/0:4,0:17:41.94:0,42,485	0/0:8,0:16:38.94:0,39,526	0/0:21,0:36:78.31:0,78,1454	0/0:3,0:12:33.02:0,33,410	1/1:2,16:19:45.08:583,45,0	1/1:4,16:23:51.10:623,51,0	1/1:1,6:7:14.97:197,15,0	1/1:2,9:11:22.20:312,22,0	1/1:4,11:15:23.92:315,24,0	1/1:7,13:22:35.87:441,36,0	1/1:1,6:9:16.23:184,16,0	1/1:3,20:24:51:655,51,0	1/1:5,15:20:41.89:552,42,0	0/0:17,0:20:42.14:0,42,818	0/0:9,0:15:36.12:0,36,705	0/0:6,0:10:18.06:0,18,347	1/1:6,9:15:17.77:236,18,0	1/1:4,11:17:29.81:362,30,0	1/1:2,8:11:22.20:279,22,0	1/1:2,20:24:53.98:678,54,0	1/1:5,12:17:32.88:434,33,0	0/0:8,0:18:27.09:0,27,548	1/1:4,12:16:9.45:371,9,0
chr10	31595392	.	CT	C	1066.62	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=8.764;DP=730;FS=0.689;HRun=1;HaplotypeScore=71.5244;InbreedingCoeff=0.9998;MQ=84.90;MQ0=0;MQRankSum=-2.116;QD=31.37;ReadPosRankSum=2.779;VQSLOD=3.4168;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:59,0:59:99:0,178,2764	0/0:15,0:15:42.14:0,42,668	0/0:19,0:19:56.91:0,57,799	0/0:27,0:27:78.22:0,78,1191	0/0:30,0:30:87.25:0,87,1320	0/0:19,0:19:57.19:0,57,909	0/0:22,0:21:63.21:0,63,1007	0/0:28,0:28:78.24:0,78,1184	1/1:0,34:34:90.24:1162,90,0	0/0:29,0:28:81.28:0,81,1295	0/0:19,0:19:57.18:0,57,887	0/0:28,0:28:84.29:0,84,1342	0/0:21,0:21:63.20:0,63,967	0/0:27,0:27:81.28:0,81,1294	0/0:28,0:28:84.29:0,84,1343	0/0:21,0:21:63.19:0,63,960	0/0:33,0:33:99:0,99,1579	0/0:38,0:38:99:0,114,1793	0/0:22,0:22:66.21:0,66,1015	0/0:21,0:21:63.21:0,63,1007	0/0:29,0:29:87.27:0,87,1342	0/0:23,0:23:69.24:0,69,1099	0/0:20,0:20:60.20:0,60,959	0/0:22,0:22:66.18:0,66,1027	0/0:19,0:19:57.15:0,57,861	0/0:39,0:39:99:0,117,1808	0/0:26,0:25:78.25:0,78,1223	0/0:12,0:12:36.04:0,36,476
chr10	31596201	.	AT	A	8505.65	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=14.203;DP=572;FS=0.332;HRun=8;HaplotypeScore=64.4645;InbreedingCoeff=0.9777;MQ=74.29;MQ0=0;MQRankSum=-4.120;QD=23.96;ReadPosRankSum=2.840;VQSLOD=5.5876;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,29:30:81.08:771,81,0	0/0:8,0:8:21.06:0,21,254	0/0:14,0:13:35.47:0,35,401	0/0:9,0:9:3.99:0,4,183	1/1:1,28:29:75.11:724,75,0	0/0:21,0:21:60.17:0,60,713	0/0:25,1:26:46.22:0,46,807	0/0:28,0:28:45.01:0,45,773	0/0:22,0:22:60.18:0,60,725	1/1:4,20:24:60.09:579,60,0	1/1:1,22:23:66.11:637,66,0	1/1:0,15:15:39.06:377,39,0	1/1:2,15:17:45.07:434,45,0	1/1:3,18:21:45.07:434,45,0	1/1:2,14:16:27.04:261,27,0	1/1:0,19:19:48.08:464,48,0	1/1:1,16:18:47.11:440,47,0	1/1:1,18:19:51.97:495,52,0	0/0:14,0:14:36.09:0,36,415	0/0:27,0:27:78.24:0,78,942	0/0:18,0:18:54.17:0,54,652	1/1:2,19:21:42.06:405,42,0	1/1:4,25:29:63.10:608,63,0	1/1:3,15:18:39.06:377,39,0	1/1:2,15:17:42.06:406,42,0	1/1:0,28:28:81.10:774,81,0	0/0:30,0:30:75.23:0,75,906	1/1:0,11:11:33.05:319,33,0
chr10	31596320	.	TA	T	7785.97	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=7.468;DP=486;FS=13.702;HRun=9;HaplotypeScore=58.7426;InbreedingCoeff=0.9919;MQ=76.43;MQ0=0;MQRankSum=-1.562;QD=22.57;ReadPosRankSum=3.801;VQSLOD=4.6199;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,9:9:27.01:247,27,0	1/1:0,12:12:30.02:275,30,0	0/0:11,0:11:20.99:0,21,169	0/0:13,0:13:18.89:0,19,219	1/1:4,28:32:84.03:769,84,0	1/1:7,18:25:51.01:467,51,0	1/1:0,8:8:21.01:192,21,0	0/0:28,0:28:69.20:0,69,787	1/1:3,18:21:47.98:432,48,0	1/1:2,20:22:60.03:549,60,0	1/1:4,13:17:33.01:302,33,0	1/1:2,7:9:21.01:192,21,0	1/1:2,12:15:32.05:280,32,0	1/1:3,22:25:60.02:549,60,0	1/1:0,16:16:42.02:384,42,0	1/1:0,9:9:24.01:220,24,0	1/1:5,6:11:15:137,15,0	1/1:0,15:15:42.02:384,42,0	0/0:16,0:16:42.10:0,42,472	0/0:31,0:31:70.37:0,70,781	0/0:14,0:14:36.07:0,36,402	1/1:0,16:16:42.02:385,42,0	1/1:0,20:20:54.03:495,54,0	1/1:1,7:8:20.97:184,21,0	1/1:2,21:23:57.03:522,57,0	1/1:2,21:23:63.03:577,63,0	0/0:28,0:28:69.16:0,69,781	1/1:0,9:9:27.01:247,27,0
chr10	31596570	.	T	TA	849.58	PASS	AB=1.000;AC=9;AF=0.409;AN=22;BaseQRankSum=-0.439;DP=246;FS=0.732;HRun=10;HaplotypeScore=42.5950;InbreedingCoeff=0.7310;MQ=70.20;MQ0=23;MQRankSum=0.225;QD=11.18;ReadPosRankSum=0.890;VQSLOD=2.1947;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	1/1:1,5:5:15.04:158,15,0	0/0:34,0:12:1.37:0,1,94	0/1:26,0:8:15.35:15,0,33	./.	1/1:2,12:12:30.08:320,30,0	1/1:5,9:11:21.05:224,21,0	0/0:33,1:33:53.91:0,54,636	1/1:13,3:13:24.06:253,24,0	./.	./.	./.	./.	./.	./.	./.	./.	./.	0/0:23,0:20:25.85:0,26,410	0/0:25,0:24:65.88:0,66,533	0/0:9,0:8:20.98:0,21,172	./.	./.	./.	./.	./.	0/0:21,0:20:49.24:0,49,413	./.
chr10	31596584	.	TA	T	147.89	PASS	AC=2;AF=0.091;AN=22;BaseQRankSum=3.312;DP=223;FS=1.307;HRun=10;HaplotypeScore=73.1678;InbreedingCoeff=0.9466;MQ=85.94;MQ0=7;MQRankSum=-1.246;QD=16.43;ReadPosRankSum=0.656;VQSLOD=4.1396;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	0/0:6,0:6:15.03:0,15,157	0/0:38,0:13:22.31:0,22,152	0/0:31,0:13:15.17:0,15,207	./.	0/0:11,0:11:33.07:0,33,356	0/0:12,0:12:17.64:0,18,175	0/0:37,0:37:93.20:0,93,989	1/1:4,5:9:26.99:234,27,0	./.	./.	./.	./.	./.	./.	./.	./.	./.	0/0:24,0:24:54.11:0,54,578	0/0:29,0:29:68.96:0,69,734	0/0:8,0:8:17.88:0,18,180	./.	./.	./.	./.	./.	0/0:18,0:18:51.10:0,51,543	./.
chr10	31596899	.	G	GTTT	534.39	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-2.131;DP=604;FS=1.037;HRun=8;HaplotypeScore=88.2748;InbreedingCoeff=0.9814;MQ=76.04;MQ0=0;MQRankSum=-0.001;QD=28.13;ReadPosRankSum=-0.169;VQSLOD=1.9933;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:48.12:0,48,630	0/0:6,0:6:15.03:0,15,197	0/0:25,0:25:48.04:0,48,588	0/0:18,0:18:35.63:0,36,421	0/0:33,0:33:82.43:0,82,1157	0/0:34,0:34:90.26:0,90,1165	0/0:12,0:12:30.08:0,30,380	0/0:29,0:29:60.15:0,60,788	1/1:2,12:19:33.09:629,33,0	0/0:22,0:22:63.19:0,63,816	0/0:25,0:25:63.17:0,63,828	0/0:22,0:22:57.02:0,57,724	0/0:13,0:13:33.06:0,33,414	0/0:22,0:22:63.19:0,63,813	0/0:24,0:25:61.64:0,62,801	0/0:19,0:19:51.14:0,51,670	0/0:12,0:12:30.09:0,30,394	0/0:18,0:18:47.89:0,48,630	0/0:18,0:17:42.11:0,42,544	0/0:31,0:31:78.22:0,78,1025	0/0:18,0:18:48.11:0,48,600	0/0:20,0:20:45.10:0,45,591	0/0:31,0:31:75.22:0,75,985	0/0:18,0:18:54.15:0,54,693	0/0:22,0:22:57.14:0,57,732	0/0:22,0:22:54.15:0,54,710	0/0:30,0:30:87.26:0,87,1126	0/0:19,0:19:25.76:0,26,460
chr10	31598015	.	GT	G	7423	PASS	AB=0.909;AC=35;AF=0.625;AN=56;BaseQRankSum=15.440;DP=626;FS=4.353;HRun=10;HaplotypeScore=142.9513;InbreedingCoeff=0.9090;MQ=65.87;MQ0=0;MQRankSum=-13.274;QD=19.23;ReadPosRankSum=4.165;VQSLOD=3.8121;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,16:20:38.95:333,39,0	0/0:2,0:14:34.09:0,34,170	0/1:9,1:10:15.01:15,0,81	0/0:14,0:14:26.87:0,27,260	1/1:3,31:34:80.97:703,81,0	0/0:7,0:23:54.62:0,55,330	0/0:2,0:17:48.73:0,49,277	0/0:31,0:32:90.08:0,90,977	0/0:23,1:24:40.11:0,40,662	1/1:4,22:26:71.97:622,72,0	1/1:2,19:21:50.97:442,51,0	1/1:2,23:25:59.97:521,60,0	1/1:2,21:23:26.79:461,27,0	1/1:2,21:23:59.97:521,60,0	1/1:2,14:16:32.96:286,33,0	1/1:2,11:13:23.96:205,24,0	1/1:7,14:21:47.90:407,48,0	1/1:1,11:11:26.99:234,27,0	0/0:28,0:28:69.16:0,69,741	0/0:25,4:30:5.88:0,6,723	0/0:24,0:24:60.13:0,60,645	1/1:6,25:31:59.94:521,60,0	1/1:3,25:28:59.91:516,60,0	1/1:5,15:20:32.99:286,33,0	1/1:5,21:26:47.94:416,48,0	1/1:1,28:29:83.98:729,84,0	0/0:32,0:32:93.23:0,93,1015	1/1:1,7:8:23.98:205,24,0
chr10	31598040	.	T	TA	14020.48	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=8.643;DP=702;FS=3.905;HRun=5;HaplotypeScore=126.6493;InbreedingCoeff=0.9999;MQ=75.60;MQ0=0;MQRankSum=-14.306;QD=34.20;ReadPosRankSum=3.282;VQSLOD=3.1093;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,22:22:63.16:809,63,0	0/0:13,0:13:33.08:0,33,355	0/0:16,0:16:31.69:0,32,305	0/0:25,0:25:48.89:0,49,492	1/1:4,30:34:87.20:1103,87,0	0/0:32,0:31:81.17:0,81,853	0/0:24,0:24:60.14:0,60,645	0/0:32,0:32:84.19:0,84,894	0/0:23,0:23:60.15:0,60,645	1/1:4,26:30:75.21:956,75,0	1/1:5,18:23:60.15:767,60,0	1/1:2,21:23:66.21:855,66,0	1/1:1,29:30:84.23:1085,84,0	1/1:3,20:23:63.19:814,63,0	1/1:2,26:28:78.24:1010,78,0	1/1:2,14:16:42.14:552,42,0	1/1:2,16:18:45.10:569,45,0	1/1:1,13:14:33.11:432,33,0	0/0:30,0:30:59.11:0,59,748	0/0:34,0:34:90.20:0,90,958	0/0:32,0:32:87.18:0,87,916	1/1:5,24:29:75.24:985,75,0	1/1:4,24:28:72.23:946,72,0	1/1:4,17:21:39.13:513,39,0	1/1:1,24:24:69.22:907,69,0	1/1:2,28:30:84.25:1088,84,0	0/0:31,0:31:78.17:0,78,829	1/1:0,16:16:48.16:631,48,0
chr10	31598988	.	AT	A	8802.15	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=10.869;DP=578;FS=1.056;HRun=8;HaplotypeScore=60.7037;InbreedingCoeff=0.9986;MQ=72.25;MQ0=0;MQRankSum=-3.152;QD=25.22;ReadPosRankSum=5.433;VQSLOD=5.1968;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,34:36:93.14:898,93,0	0/0:8,0:8:24.07:0,24,290	0/0:11,0:10:26.05:0,26,258	0/0:14,0:13:33.03:0,33,349	1/1:3,32:35:87.12:840,87,0	0/0:21,0:21:57.17:0,57,688	0/0:12,0:12:36.11:0,36,435	0/0:33,0:33:78.22:0,78,923	0/0:22,0:22:60.18:0,60,725	1/1:0,19:19:57.09:550,57,0	1/1:4,20:24:57.08:550,57,0	1/1:1,12:13:33.05:319,33,0	1/1:3,15:18:20.11:407,20,0	1/1:1,20:21:54.08:521,54,0	0/0:21,0:21:51.16:0,51,616	1/1:0,15:15:39.06:377,39,0	1/1:3,25:28:75.12:724,75,0	1/1:0,14:14:42.07:406,42,0	0/0:25,0:25:66.13:0,66,770	0/0:22,0:22:51.15:0,51,609	0/0:15,0:15:45.12:0,45,522	1/1:1,12:13:36.06:348,36,0	1/1:0,25:25:72.12:695,72,0	1/1:0,16:16:45.07:435,45,0	1/1:3,24:27:66:637,66,0	1/1:3,29:32:87.13:834,87,0	0/0:25,0:25:63.19:0,63,756	1/1:4,9:13:27.04:261,27,0
chr10	31599081	.	GA	G	381.74	PASS	AB=0.872;AC=12;AF=0.214;AN=56;BaseQRankSum=6.451;DP=458;FS=3.309;HRun=12;HaplotypeScore=53.4757;InbreedingCoeff=0.6982;MQ=67.36;MQ0=0;MQRankSum=0.319;QD=3.67;ReadPosRankSum=1.254;VQSLOD=-0.2470;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,2:31:34.29:0,34,655	1/1:1,2:3:5.96:46,6,0	0/0:7,0:7:8.82:0,9,72	0/0:7,0:6:8.83:0,9,67	0/0:23,1:25:36.70:0,37,532	1/1:4,12:17:31.91:238,32,0	1/1:4,4:8:13.98:98,14,0	0/0:24,2:28:22.34:0,22,555	1/1:0,0:12:22.41:65,22,0	0/0:19,1:21:27.65:0,28,429	0/0:13,0:13:7.08:0,7,240	0/0:16,0:17:41.28:0,41,385	0/0:12,0:13:38.91:0,39,379	0/0:28,0:29:74.55:0,75,683	1/1:5,0:16:14.25:41,14,0	0/1:22,3:25:2.35:2,0,509	0/0:23,0:24:53.24:0,53,560	0/1:19,4:23:58.90:59,0,350	0/0:11,1:12:3.63:0,4,193	0/0:22,1:24:33.87:0,34,515	0/0:6,0:7:20.88:0,21,197	0/0:2,0:3:8.85:0,9,75	0/0:14,0:14:23.88:0,24,227	0/0:10,1:12:8.47:0,8,258	0/0:16,1:18:17.22:0,17,309	0/0:18,0:19:41.89:0,42,390	0/0:15,1:16:21.84:0,22,397	0/0:10,0:13:23.88:0,24,228
chr10	31601115	.	G	GAA	1116.71	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-7.046;DP=641;FS=2.514;HRun=8;HaplotypeScore=76.0428;InbreedingCoeff=0.9692;MQ=63.54;MQ0=1;MQRankSum=-0.164;QD=25.38;ReadPosRankSum=3.909;VQSLOD=3.2012;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:51:99:0,138,1516	0/0:12,0:12:30.08:0,30,334	0/0:15,0:12:30.08:0,30,334	0/0:7,0:5:9.01:0,9,92	0/0:29,0:29:69.12:0,69,747	0/0:24,0:24:66.13:0,66,716	0/0:16,0:16:45.09:0,45,483	0/0:30,0:30:81.17:0,81,878	1/1:2,19:22:33.11:524,33,0	0/0:21,0:21:57.14:0,57,629	0/0:17,0:17:45.12:0,45,501	0/0:14,0:14:36.08:0,36,400	0/0:17,0:17:42.06:0,42,449	0/0:13,0:13:30.02:0,30,311	1/1:2,20:22:45.15:714,45,0	0/0:25,0:25:66.13:0,66,709	0/0:42,0:42:99:0,107,1193	0/0:24,0:24:69.08:0,69,741	0/0:24,0:23:66.15:0,66,718	0/0:18,0:18:39.09:0,39,434	0/0:31,0:31:77.17:0,77,843	0/0:14,0:14:27.03:0,27,292	0/0:22,0:22:66.12:0,66,706	0/0:23,0:23:69.15:0,69,749	0/0:20,0:20:48.07:0,48,507	0/0:27,0:27:69.12:0,69,741	0/0:38,0:38:99:0,111,1205	0/0:22,0:22:53.74:0,54,567
chr10	31601343	.	A	AT	14189.76	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=1.375;DP=672;FS=0.606;HRun=2;HaplotypeScore=101.0466;InbreedingCoeff=0.9842;MQ=83.97;MQ0=0;MQRankSum=-2.828;QD=38.04;ReadPosRankSum=2.944;VQSLOD=4.9087;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,32:35:90.30:1294,90,0	0/0:15,0:14:39.12:0,39,474	0/0:24,0:24:69.20:0,69,829	0/0:16,0:16:45.10:0,45,524	1/1:1,27:28:75.25:1076,75,0	0/0:27,0:27:78.23:0,78,953	0/0:22,0:22:63.18:0,63,767	0/0:31,0:31:78.23:0,78,946	0/0:33,0:33:96.30:0,96,1190	1/1:1,14:15:42.14:605,42,0	1/1:0,12:12:33.11:474,33,0	1/1:1,33:34:85.84:1213,86,0	1/1:0,27:27:69.23:991,69,0	1/1:0,25:25:69.23:987,69,0	0/0:28,0:28:81.24:0,81,991	1/1:1,32:33:93.31:1337,93,0	1/1:0,31:31:87.29:1251,87,0	1/1:0,7:7:18.06:259,18,0	0/0:12,0:12:33.08:0,33,377	0/0:19,0:19:48.15:0,48,593	0/0:46,0:46:99:0,135,1673	1/1:0,14:14:39.13:561,39,0	1/1:1,23:24:60.20:862,60,0	1/1:0,30:30:84.28:1208,84,0	1/1:2,23:25:60.20:861,60,0	1/1:2,29:31:81.24:1125,81,0	0/0:26,0:26:66.21:0,66,818	1/1:0,2:2:6.02:86,6,0
chr10	31601624	.	ACCTGT	A	3705.63	PASS	AB=0.935;AC=23;AF=0.411;AN=56;BaseQRankSum=6.461;DP=977;FS=34.194;HRun=0;HaplotypeScore=212.5585;InbreedingCoeff=-0.3737;MQ=64.74;MQ0=73;MQRankSum=-6.335;QD=5.11;ReadPosRankSum=-2.128;VQSLOD=1.0368;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:44,2:32:27.35:236,0,27	0/1:6,7:11:51.73:52,0,173	0/0:51,0:27:27.19:0,27,633	0/1:130,0:60:47.56:48,0,585	0/1:21,0:15:6.91:76,0,7	0/1:5,14:17:54.92:108,0,55	0/1:35,0:29:48.16:48,0,616	0/0:33,0:33:84.12:0,84,1537	0/0:39,0:37:90.23:0,90,1881	0/1:24,0:13:43.35:134,0,43	1/1:6,0:4:2.92:17,3,0	0/1:30,4:28:16.41:312,0,16	0/1:38,1:27:25.48:239,0,25	0/1:29,0:20:18.78:300,0,19	0/1:39,3:35:99:304,0,595	0/1:29,1:24:81.91:347,0,82	0/1:51,1:38:50.96:257,0,51	0/1:27,2:22:99:114,0,170	0/0:20,0:18:54.16:0,54,1137	0/0:22,0:22:53.70:0,54,1256	0/0:74,0:70:99:0,180,4373	0/1:18,2:14:16.78:37,0,17	0/1:23,0:20:26.28:126,0,26	0/1:75,1:56:59.26:266,0,59	1/1:20,1:16:29.59:305,30,0	0/1:24,0:17:7.88:283,0,8	0/0:13,0:12:32.96:0,33,638	0/1:10,0:9:4.18:97,0,4
chr10	31601919	.	TCCTGA	T	879.58	PASS	AB=0.955;AC=18;AF=0.321;AN=56;BaseQRankSum=4.412;DP=1379;FS=1.469;HRun=0;HaplotypeScore=210.6758;InbreedingCoeff=-0.4730;MQ=43.41;MQ0=199;MQRankSum=-3.796;QD=0.89;ReadPosRankSum=-5.287;VQSLOD=1.2998;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:68,0:41:9.49:0,9,587	0/1:20,2:14:68.84:69,0,132	0/0:57,0:8:6.60:0,7,56	0/1:107,0:18:32.72:33,0,128	0/1:23,0:16:15.10:15,0,100	0/1:35,2:29:35.14:35,0,331	0/1:110,1:71:99:160,0,1250	0/0:23,0:23:69.06:0,69,965	0/1:51,1:40:99:167,0,439	0/1:59,1:26:22.91:23,0,631	0/0:25,0:14:9.03:0,9,184	0/1:68,3:52:38.11:38,0,741	0/1:44,1:26:16.73:17,0,314	0/1:59,0:35:16.74:17,0,285	0/1:62,0:49:99:180,0,430	0/1:54,5:43:26.28:26,0,723	0/1:69,2:54:7.90:8,0,748	0/0:49,0:35:13.15:0,13,850	0/0:14,0:11:33.08:0,33,637	0/0:13,0:10:21.07:0,21,413	0/0:96,0:91:99:0,231,5034	0/1:39,0:21:35.50:36,0,132	0/1:22,0:12:29.22:29,0,47	0/1:78,5:65:58.44:58,0,877	0/0:30,0:21:9.29:0,9,403	0/1:53,0:28:70.96:71,0,423	0/0:19,0:18:43.86:0,44,799	0/1:2,4:6:9.02:56,0,9
chr10	31601953	.	GACCTC	G	216.94	PASS	AB=0.955;AC=10;AF=0.179;AN=56;BaseQRankSum=6.438;DP=1122;FS=3.744;HRun=0;HaplotypeScore=188.6853;InbreedingCoeff=0.0265;MQ=39.04;MQ0=167;MQRankSum=-5.176;QD=0.69;ReadPosRankSum=-1.739;VQSLOD=2.7267;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:46,2:31:19.68:0,20,510	0/0:8,0:8:12.04:0,12,215	1/1:62,0:1:0.89:2,1,0	0/0:111,0:11:8.64:0,9,170	0/0:12,0:8:1.63:0,2,18	0/1:17,2:12:95.72:96,0,146	0/0:55,1:34:49.38:0,49,573	0/0:16,0:16:47.10:0,47,668	0/0:54,0:41:51.36:0,51,848	0/0:41,0:18:48.18:0,48,671	0/0:16,0:10:17.99:0,18,229	0/1:50,2:41:37.78:38,0,581	0/1:41,1:28:45.19:45,0,326	0/0:39,1:24:26.05:0,26,285	0/0:71,1:56:36.70:0,37,1385	0/1:45,5:38:99:106,0,1057	0/0:59,0:46:64.81:0,65,1055	0/1:43,1:34:44.03:44,0,785	0/0:14,0:10:22:0,22,384	0/0:15,0:13:1.88:0,2,600	0/0:89,1:88:99:0,207,4167	0/0:24,0:17:12.25:0,12,150	0/0:14,0:6:11.25:0,11,130	0/0:79,0:61:65.74:0,66,972	0/0:26,0:19:23.73:0,24,366	0/1:39,0:23:3.14:3,0,482	0/0:12,0:12:30.01:0,30,651	1/1:6,0:5:1.02:3,1,0
chr10	31601988	.	GACCTC	G	1000.77	PASS	AB=0.981;AC=16;AF=0.286;AN=56;BaseQRankSum=4.989;DP=1140;FS=19.890;HRun=0;HaplotypeScore=189.2477;InbreedingCoeff=-0.2965;MQ=41.58;MQ0=175;MQRankSum=-7.438;QD=1.57;ReadPosRankSum=-3.234;VQSLOD=0.9090;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:57,1:34:72.66:73,0,169	0/1:12,0:9:63.82:64,0,86	0/0:60,0:8:7.94:0,8,169	0/0:104,0:24:12.20:0,12,297	0/0:19,0:10:3.35:0,3,16	0/1:18,0:10:76.67:104,0,77	0/1:60,0:26:92.01:92,0,132	0/0:26,0:21:60.20:0,60,1030	0/0:34,0:23:3.06:0,3,343	0/1:61,0:29:41.16:41,0,551	0/0:18,0:11:14.01:0,14,176	0/1:42,5:32:99:205,0,161	0/1:36,4:23:99:166,0,129	0/1:55,0:29:46.63:47,0,103	0/0:51,0:42:28.81:0,29,670	0/1:55,0:29:99:150,0,519	0/1:54,1:38:23.93:24,0,616	0/1:40,2:33:60.58:61,0,527	0/0:15,0:11:32.95:0,33,451	0/0:16,0:15:42.02:0,42,930	0/0:93,0:87:99:0,182,3982	0/1:24,0:14:18.83:19,0,25	0/0:14,0:4:2.80:0,3,13	0/1:72,0:55:29.43:29,0,370	0/0:32,0:18:15.25:0,15,246	0/1:33,0:19:18:18,0,257	0/0:14,0:14:39.03:0,39,771	1/1:7,0:7:6.01:65,6,0
chr10	31602008	.	GACCTC	G	4362.86	PASS	AB=0.936;AC=24;AF=0.444;AN=54;BaseQRankSum=0.857;DP=1170;FS=5.210;HRun=0;HaplotypeScore=187.7884;InbreedingCoeff=-0.5273;MQ=40.73;MQ0=181;MQRankSum=-2.508;QD=5.44;ReadPosRankSum=0.082;VQSLOD=3.6339;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:52,3:33:65.21:404,0,65	0/1:16,0:11:20.46:20,0,136	0/0:68,0:10:3.02:0,3,259	0/0:103,0:21:29.40:0,29,274	1/1:7,8:10:3.01:36,3,0	0/1:23,0:17:14.03:14,0,648	0/0:63,0:29:28.82:0,29,759	0/0:23,0:23:64.71:0,65,1026	1/1:28,0:19:3.14:190,3,0	0/1:57,5:29:99:370,0,251	0/1:26,1:13:34.95:35,0,121	0/1:42,4:32:99:248,0,266	0/1:35,3:24:99:193,0,209	0/1:39,6:26:99:418,0,129	0/1:45,0:35:14.39:361,0,14	0/1:54,5:31:99:403,0,379	0/1:50,3:37:99:243,0,520	0/1:54,0:47:99:577,0,378	0/1:21,0:13:19.50:19,0,409	0/1:15,0:15:19.36:19,0,338	0/0:89,0:85:24.13:0,24,1249	0/1:24,1:16:0.51:31,0,1	./.	0/1:43,29:58:99:120,0,387	0/1:38,2:23:13.52:14,0,195	0/1:23,15:19:82.41:511,0,82	0/1:14,0:14:33.54:34,0,216	0/1:10,0:9:24.90:103,0,25
chr10	31602013	.	CTCCTG	C	2493.80	PASS	AB=1.000;AC=22;AF=0.423;AN=52;BaseQRankSum=-2.428;DP=1162;FS=44.875;HRun=0;HaplotypeScore=199.6767;InbreedingCoeff=0.1541;MQ=44.19;MQ0=178;MQRankSum=0.492;QD=3.39;ReadPosRankSum=5.122;VQSLOD=1.4216;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:51,0:31:25.67:69,0,26	0/0:18,0:12:9.03:0,9,183	0/0:68,0:13:8.03:0,8,254	0/1:106,0:29:3.30:3,0,100	./.	0/0:25,0:20:44.72:0,45,931	0/0:63,0:31:48.16:0,48,1014	1/1:20,0:20:8.98:97,9,0	0/0:26,0:18:15.52:0,16,187	0/1:70,0:33:62.53:63,0,278	0/0:27,0:13:0:0,0,0	0/1:47,0:33:47.46:47,0,91	0/1:37,0:25:7.68:28,0,8	0/1:41,0:23:12.41:117,0,12	0/0:42,0:33:14.77:0,15,134	0/1:55,0:31:65.90:66,0,121	0/1:52,0:35:14.53:15,0,58	0/0:53,0:46:27.97:0,28,689	1/1:15,4:11:12.03:189,12,0	1/1:9,6:15:15.05:238,15,0	1/1:40,48:83:69.55:1238,70,0	0/0:26,0:18:3.47:0,3,26	./.	1/1:68,0:53:6.45:57,6,0	0/0:41,0:24:2.87:0,3,18	0/1:39,0:19:14.67:103,0,15	1/1:5,10:15:18.06:327,18,0	0/1:12,0:11:5.27:5,0,45
chr10	31602373	.	A	AC	10503.43	PASS	AB=0.542;AC=41;AF=0.788;AN=52;BaseQRankSum=13.815;DP=443;FS=1.470;HRun=1;HaplotypeScore=75.4133;InbreedingCoeff=0.8894;MQ=44.79;MQ0=21;MQRankSum=-2.533;QD=33.13;ReadPosRankSum=1.902;VQSLOD=4.6799;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,18:18:42.10:592,42,0	1/1:0,9:9:21.07:305,21,0	./.	./.	1/1:0,14:14:21.07:281,21,0	1/1:0,32:32:78.26:1137,78,0	0/1:2,11:12:5.79:386,0,6	0/0:31,0:22:60.19:0,60,766	1/1:0,14:14:36.08:504,36,0	1/1:2,14:15:36.12:527,36,0	1/1:0,16:16:30.10:436,30,0	1/1:1,15:14:33.03:436,33,0	1/1:2,12:14:33.03:435,33,0	1/1:0,20:20:48.16:705,48,0	1/1:0,8:8:24.08:351,24,0	1/1:1,19:20:54.10:746,54,0	1/1:2,16:16:45.15:657,45,0	1/1:3,16:14:39.13:569,39,0	0/0:16,0:15:39.13:0,39,506	0/0:18,0:17:45.15:0,45,584	0/0:33,0:29:69.18:0,69,864	1/1:0,8:8:18.06:264,18,0	1/1:0,10:9:18.06:264,18,0	1/1:0,13:13:33.07:462,33,0	1/1:0,15:15:39.13:567,39,0	1/1:1,19:20:51.17:750,51,0	0/0:25,0:25:60.19:0,60,779	1/1:0,3:3:9.03:130,9,0
chr10	31604171	.	A	AC	23115.71	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=-16.506;DP=845;FS=0.890;HRun=2;HaplotypeScore=74.3827;InbreedingCoeff=0.9999;MQ=77.65;MQ0=0;MQRankSum=-5.422;QD=39.11;ReadPosRankSum=6.899;VQSLOD=4.4737;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,35:36:99:1425,99,0	1/1:1,11:12:33.11:475,33,0	0/0:45,0:45:99:0,105,1423	0/0:31,0:30:81.14:0,81,973	1/1:2,35:37:99:1422,99,0	1/1:1,22:23:60.20:864,60,0	1/1:0,29:29:75.25:1080,75,0	0/0:32,0:32:90.28:0,90,1110	1/1:1,26:27:72.24:1037,72,0	1/1:3,31:34:93.31:1323,93,0	1/1:0,29:29:81.27:1166,81,0	1/1:0,24:24:60.03:864,60,0	1/1:2,35:37:99:1457,102,0	1/1:1,22:23:57.19:821,57,0	1/1:1,34:35:99:1426,99,0	1/1:2,37:39:99:1555,108,0	1/1:1,34:35:99:1426,99,0	1/1:1,24:25:63.21:907,63,0	0/0:20,0:20:57.01:0,57,683	0/0:34,0:34:99:0,99,1227	0/0:59,0:59:99:0,172,2107	1/1:1,34:35:99:1468,102,0	1/1:0,23:23:69.23:991,69,0	1/1:0,17:17:48.16:691,48,0	1/1:3,17:20:48.16:691,48,0	1/1:2,24:26:72.24:1033,72,0	0/0:33,0:33:96.30:0,96,1189	1/1:0,25:25:69.23:993,69,0
chr10	31608095	.	GAC	G	747.85	PASS	AB=0.880;AC=11;AF=0.204;AN=54;BaseQRankSum=-4.599;DP=464;FS=4.034;HRun=0;HaplotypeScore=101.4817;InbreedingCoeff=0.4982;MQ=55.90;MQ0=10;MQRankSum=3.848;QD=6.50;ReadPosRankSum=1.574;VQSLOD=3.2917;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:4.59:0,5,43	./.	0/0:14,0:5:3:0,3,28	0/0:16,0:9:6.36:0,6,39	0/0:24,0:23:10.25:0,10,52	0/0:12,0:11:8.75:0,9,67	0/0:30,0:30:11.94:0,12,98	1/1:15,4:18:11.83:96,12,0	0/0:12,0:11:2.80:0,3,13	0/0:22,0:19:23.91:0,24,201	0/0:11,0:12:8.29:0,8,62	0/0:14,0:14:3:0,3,26	0/0:8,0:8:6:0,6,52	0/0:13,0:12:2.99:0,3,23	0/0:7,0:6:5.49:0,5,24	0/0:12,0:12:2.17:0,2,32	0/0:15,0:15:8.99:0,9,76	0/0:20,0:20:9:0,9,91	1/1:9,1:10:8.85:73,9,0	0/1:19,1:18:30.54:80,0,31	1/1:18,12:30:23.72:266,24,0	1/1:12,0:12:1.36:2,1,0	0/0:14,0:14:9:0,9,77	0/0:20,0:20:14.71:0,15,101	0/0:19,0:19:4.78:0,5,18	0/0:20,0:20:35.84:0,36,300	1/1:5,15:20:35.93:380,36,0	0/0:9,0:9:12:0,12,108
chr10	31608132	.	A	AACACACACT	3721.95	PASS	AB=0.780;AC=31;AF=0.554;AN=56;BaseQRankSum=5.169;DP=536;FS=6.919;HRun=0;HaplotypeScore=152.6738;InbreedingCoeff=0.1218;MQ=54.55;MQ0=12;MQRankSum=-5.215;QD=9.21;ReadPosRankSum=-0.102;VQSLOD=2.0396;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:3,0:35:9.19:170,9,0	0/1:8,0:8:33.53:44,0,34	0/0:12,0:5:12.04:0,12,248	0/0:20,0:9:22.71:0,23,464	0/1:22,0:30:54.27:69,0,54	0/1:18,0:18:61.46:61,0,62	0/1:26,0:26:70.94:100,0,71	0/0:16,0:15:42.04:0,42,658	1/1:7,1:18:7.34:259,7,0	0/1:5,0:18:51.52:554,0,52	1/1:5,0:19:5.97:53,6,0	1/1:8,0:18:5.36:144,5,0	0/1:5,0:12:32.64:393,0,33	0/1:8,0:8:3.87:4,0,75	1/1:5,0:15:0.68:74,1,0	1/1:4,0:13:11.83:243,12,0	0/1:4,0:20:10.34:193,0,10	0/1:2,0:24:15.11:108,0,15	0/0:15,0:15:42.56:0,43,766	0/0:18,0:15:36.09:0,36,634	0/0:28,0:28:63.69:0,64,1400	0/1:14,0:14:26.09:81,0,26	1/1:7,0:21:8.76:64,9,0	1/1:4,0:20:9:139,9,0	1/1:7,0:24:8.97:160,9,0	0/1:7,0:27:69.84:492,0,70	0/0:23,0:22:57.18:0,57,1278	1/1:0,0:10:12.04:317,12,0
chr10	31610927	.	AT	A	10088.27	PASS	AB=0.847;AC=54;AF=0.964;AN=56;BaseQRankSum=-3.445;DP=547;FS=1.155;HRun=11;HaplotypeScore=60.5424;InbreedingCoeff=0.0092;MQ=75.92;MQ0=1;MQRankSum=-3.580;QD=18.44;ReadPosRankSum=4.012;VQSLOD=5.8373;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,15:19:41.91:345,42,0	1/1:1,8:9:17.98:148,18,0	0/1:15,2:16:51.58:52,0,114	0/1:6,1:8:12.45:12,0,100	1/1:5,29:36:84.96:677,85,0	1/1:2,28:30:77.90:640,78,0	1/1:0,9:10:20.02:154,20,0	1/1:1,22:23:62.87:510,63,0	1/1:2,8:11:19.92:145,20,0	1/1:5,18:23:47.92:394,48,0	1/1:3,30:34:87.95:701,88,0	1/1:6,16:22:47.92:394,48,0	1/1:2,20:22:44.93:369,45,0	1/1:0,14:14:38.96:320,39,0	1/1:4,17:21:50.93:419,51,0	1/1:1,12:14:37.99:301,38,0	1/1:3,16:19:44.94:369,45,0	1/1:1,14:15:35.94:296,36,0	1/1:1,17:18:47.92:391,48,0	1/1:5,28:33:68.84:566,69,0	1/1:3,10:13:29.95:246,30,0	1/1:1,21:23:61.96:498,62,0	1/1:3,22:27:32.75:449,33,0	1/1:1,6:7:17.98:148,18,0	1/1:4,24:30:72.98:578,73,0	1/1:2,16:18:47.93:393,48,0	1/1:3,23:27:61.95:498,62,0	1/1:0,4:4:8.99:74,9,0
chr10	31612389	.	A	AATGTGT	6835.68	PASS	AB=0.900;AC=44;AF=0.786;AN=56;BaseQRankSum=-4.618;DP=644;FS=14.502;HRun=0;HaplotypeScore=131.0098;InbreedingCoeff=0.4450;MQ=66.76;MQ0=24;MQRankSum=-1.128;QD=13.78;ReadPosRankSum=-3.349;VQSLOD=2.2923;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,0:31:12.04:278,12,0	1/1:0,0:7:7.27:111,7,0	0/0:54,0:23:45.01:0,45,492	0/0:52,0:22:53.85:0,54,501	1/1:16,0:16:23.61:226,24,0	1/1:3,0:17:5.81:67,6,0	1/1:2,0:21:14.91:204,15,0	0/0:18,0:17:10.77:0,11,201	1/1:26,0:25:52.95:495,53,0	1/1:5,5:16:31.82:509,32,0	1/1:17,0:16:32.60:377,33,0	1/1:1,11:19:12.04:375,12,0	1/1:0,14:18:5.94:123,6,0	1/1:4,0:16:9:119,9,0	1/1:21,0:21:42.35:391,42,0	1/1:8,9:18:24.03:688,24,0	1/1:4,13:25:2.60:10,3,0	1/1:4,0:27:9.92:181,10,0	0/1:18,0:17:27.60:28,0,241	0/1:21,0:21:74.13:74,0,218	0/1:46,0:43:99:100,0,604	1/1:3,0:14:3.64:110,4,0	1/1:22,0:23:35.23:331,35,0	1/1:34,0:34:75.19:1182,75,0	1/1:4,11:18:8.99:166,9,0	1/1:5,0:16:38.97:440,39,0	0/0:23,0:23:51.45:0,51,579	0/1:2,3:6:40.21:253,0,40
chr10	31612747	.	GACTAACTA	G	1127.68	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.399;DP=612;FS=8.846;HRun=0;HaplotypeScore=144.2155;InbreedingCoeff=0.9757;MQ=59.61;MQ0=0;MQRankSum=-6.493;QD=31.32;ReadPosRankSum=3.052;VQSLOD=2.9445;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,102,3507	0/0:4,0:4:12.04:0,12,482	0/0:26,0:24:54.17:0,54,1328	0/0:25,0:23:51.13:0,51,1344	0/0:20,0:20:42.09:0,42,1358	0/0:26,0:26:63.01:0,63,1955	0/0:21,0:21:60.18:0,60,1860	0/0:42,0:42:99:0,105,2985	1/1:2,19:21:30.10:769,30,0	0/0:24,0:24:69.21:0,69,2087	0/0:21,0:21:54.17:0,54,1816	0/0:23,0:23:51.01:0,51,1536	0/0:19,0:19:48.09:0,48,1732	0/0:23,0:23:53.90:0,54,1495	1/1:1,14:15:18.06:478,18,0	0/0:18,0:18:51.11:0,51,1697	0/0:21,0:21:57.10:0,57,1796	0/0:17,0:18:48.15:0,48,1742	0/0:25,0:24:60.15:0,60,1868	0/0:20,0:20:48.14:0,48,1606	0/0:39,0:39:99:0,108,3785	0/0:10,0:10:18.01:0,18,478	0/0:16,0:16:39.05:0,39,1112	0/0:24,0:24:63.20:0,63,2203	0/0:17,0:17:42.08:0,42,1444	0/0:24,0:24:63.19:0,63,2019	0/0:12,0:12:33.07:0,33,1090	0/0:14,0:14:42.14:0,42,1789
chr10	31613316	.	C	CCTAACTAACTAA	31797.82	PASS	AB=1.000;AC=43;AF=0.768;AN=56;BaseQRankSum=-9.662;DP=757;FS=1.045;HRun=0;HaplotypeScore=220.6674;InbreedingCoeff=0.8652;MQ=56.50;MQ0=5;MQRankSum=-9.580;QD=53.17;ReadPosRankSum=-2.902;VQSLOD=3.6600;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:22,7:29:32.14:1481,32,0	1/1:5,0:11:12.01:491,12,0	0/0:32,0:26:21:0,21,355	0/0:28,0:26:14.11:0,14,309	1/1:25,0:41:69.47:2412,69,0	1/1:18,0:28:33.11:1574,33,0	1/1:24,0:24:59.72:1160,60,0	0/1:17,0:25:31.43:31,0,107	1/1:19,0:35:48.16:1273,48,0	1/1:18,18:41:75.06:2782,75,0	1/1:13,14:27:33.11:1563,33,0	1/1:11,15:30:39.13:2133,39,0	1/1:10,12:24:33.11:1805,33,0	1/1:15,18:35:30.10:1681,30,0	1/1:10,19:30:36.12:2027,36,0	1/1:12,15:30:36.06:1880,36,0	1/1:15,11:28:12.04:525,12,0	1/1:17,0:17:17.96:569,18,0	0/0:11,0:29:16.15:0,16,1076	0/0:6,0:12:14.54:0,15,345	0/0:10,0:25:36.12:0,36,995	1/1:7,7:20:30.02:1264,30,0	1/1:11,14:26:27.09:1495,27,0	1/1:12,3:15:9.03:458,9,0	1/1:9,13:24:30.10:1644,30,0	1/1:18,17:35:62.99:2067,63,0	0/0:11,0:33:63.22:0,63,1710	1/1:9,9:19:27.09:1482,27,0
chr10	31614486	.	AGAGAGAGAGAGAGAGT	A	4003.92	PASS	AB=0.968;AC=29;AF=0.518;AN=56;BaseQRankSum=5.338;DP=512;FS=39.516;HRun=0;HaplotypeScore=177.7146;InbreedingCoeff=0.0397;MQ=58.06;MQ0=33;MQRankSum=1.542;QD=11.64;ReadPosRankSum=5.146;VQSLOD=1.4501;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:13,0:11:80.74:81,0,101	1/1:7,0:7:13.52:105,14,0	0/0:17,0:9:9.74:0,10,228	0/0:28,0:12:12.30:0,12,200	0/1:17,0:17:89.76:176,0,90	1/1:12,0:11:11.98:100,12,0	0/1:21,0:21:99:159,0,211	0/0:24,0:21:60:0,60,724	0/1:20,0:19:33.06:125,0,33	1/1:7,14:21:57:699,57,0	1/1:13,0:13:13.27:184,13,0	0/1:14,1:15:29.94:256,0,30	1/1:14,0:13:12.96:102,13,0	1/1:17,0:17:32.54:377,33,0	0/1:23,0:23:74.76:75,0,546	0/1:10,8:17:48.01:432,0,48	0/1:19,0:14:99:124,0,184	1/1:12,0:11:11.65:146,12,0	0/0:13,0:13:36.36:0,36,641	0/0:24,0:24:48:0,48,610	0/0:41,0:36:74.87:0,75,1354	1/1:5,2:7:11.98:99,12,0	0/1:19,1:19:14.05:178,0,14	0/1:26,0:24:35.63:41,0,36	0/1:14,0:11:99:171,0,114	0/1:20,0:20:99:282,0,100	0/0:21,0:20:41.42:0,41,1022	0/1:15,0:11:92:92,0,156
chr10	31614488	.	AGAGAGAGAGAGAGT	A	4704.55	PASS	AB=0.992;AC=36;AF=0.643;AN=56;BaseQRankSum=5.454;DP=484;FS=19.805;HRun=0;HaplotypeScore=152.6563;InbreedingCoeff=0.4966;MQ=61.95;MQ0=32;MQRankSum=1.634;QD=15.13;ReadPosRankSum=5.286;VQSLOD=2.4182;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:12,0:10:57.55:84,0,58	1/1:6,0:6:14.75:150,15,0	0/0:17,0:10:12.70:0,13,255	0/0:30,0:14:18.30:0,18,252	1/1:17,0:17:27.68:212,28,0	1/1:8,0:7:11.99:100,12,0	0/1:21,0:21:48.44:212,0,48	0/0:24,0:21:61.71:0,62,615	1/1:2,14:16:8.78:242,9,0	1/1:18,1:19:56.85:737,57,0	1/1:11,1:12:26.95:220,27,0	1/1:2,12:14:9.03:324,9,0	1/1:12,0:11:14.68:138,15,0	1/1:13,0:13:32.44:280,32,0	0/1:23,0:23:99:127,0,345	1/1:14,0:13:17.41:430,17,0	0/1:18,1:14:2.30:161,0,2	1/1:9,0:8:11.74:190,12,0	0/0:14,0:14:39.36:0,39,618	0/0:24,0:24:38.99:0,39,454	0/0:42,0:37:77.87:0,78,1198	1/1:9,0:9:17.97:147,18,0	1/1:16,0:15:24.87:209,25,0	1/1:6,17:21:3.01:91,3,0	0/1:14,0:11:91.50:171,0,91	1/1:19,0:19:13.57:380,14,0	0/0:21,0:20:41.39:0,41,889	0/1:15,0:11:63.42:98,0,63
chr10	31615563	.	GTTTGT	G	899.06	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=-1.580;DP=505;FS=8.399;HRun=0;HaplotypeScore=131.0003;InbreedingCoeff=0.7265;MQ=68.18;MQ0=7;MQRankSum=-1.072;QD=14.05;ReadPosRankSum=-0.336;VQSLOD=2.1125;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:26.23:0,26,279	0/0:3,0:3:3.01:0,3,31	0/1:36,0:17:8.57:9,0,482	0/0:28,0:12:23.21:0,23,255	0/0:27,0:27:59.48:0,59,734	0/0:29,0:29:78.14:0,78,851	0/0:10,0:10:27.04:0,27,270	0/0:31,0:31:86.56:0,87,1625	1/1:0,7:7:15.05:316,15,0	0/0:25,0:25:75.19:0,75,796	0/0:13,0:12:33.04:0,33,325	0/0:12,0:13:16.16:0,16,289	0/0:11,0:11:27.06:0,27,284	0/0:13,0:13:30.04:0,30,336	1/1:1,20:21:33.11:698,33,0	0/0:21,0:21:59.91:0,60,657	0/0:27,0:27:66.09:0,66,683	0/0:16,0:16:41.89:0,42,442	0/0:19,0:19:56.94:0,57,1061	0/0:19,0:19:50.51:0,51,1064	0/0:8,0:8:21.05:0,21,466	0/0:13,0:13:33.04:0,33,362	0/0:14,0:14:36.09:0,36,379	0/0:9,0:9:24.04:0,24,244	0/0:10,0:10:21.04:0,21,218	0/0:26,0:26:72.17:0,72,788	0/0:26,0:26:57.65:0,58,1326	0/0:16,0:16:45.10:0,45,471
chr10	31615567	.	GTT	G	7093.32	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=-5.806;DP=504;FS=4.980;HRun=12;HaplotypeScore=82.3773;InbreedingCoeff=0.9450;MQ=67.79;MQ0=7;MQRankSum=-2.813;QD=21.30;ReadPosRankSum=4.463;VQSLOD=4.5922;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,11:14:24.04:242,24,0	1/1:0,4:4:3.01:30,3,0	0/0:32,0:14:23.48:0,23,235	0/0:28,0:12:8.87:0,9,82	1/1:3,23:26:63.09:637,63,0	1/1:7,21:28:54.06:549,54,0	1/1:2,9:11:21.04:214,21,0	0/0:12,0:33:71.04:0,71,705	1/1:7,0:7:13.88:63,14,0	1/1:0,25:25:75.15:756,75,0	1/1:2,10:11:24.04:244,24,0	1/1:1,11:12:27.03:271,27,0	1/1:0,10:10:27.06:275,27,0	1/1:1,12:13:24.03:244,24,0	1/1:20,0:20:30.78:138,31,0	1/1:5,14:21:35.50:400,35,0	1/1:5,22:27:54.11:549,54,0	1/1:1,15:17:38.81:378,39,0	0/0:8,0:22:39.04:0,39,400	0/0:5,0:19:45.29:0,45,455	0/0:2,0:9:18.03:0,18,187	1/1:4,9:13:17.99:183,18,0	1/1:0,14:14:36.08:366,36,0	1/1:1,9:10:21.04:214,21,0	1/1:2,7:9:15.02:153,15,0	1/1:1,24:25:72.14:731,72,0	0/0:6,0:27:54.04:0,54,553	1/1:0,15:15:45.10:458,45,0
chr10	31615836	.	TTTTTA	T	7455.89	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=4.408;DP=394;FS=4.985;HRun=0;HaplotypeScore=104.3163;InbreedingCoeff=0.8553;MQ=68.84;MQ0=4;MQRankSum=-4.624;QD=32.85;ReadPosRankSum=3.619;VQSLOD=4.6434;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:14,1:15:27.05:425,27,0	1/1:3,4:7:15.05:272,15,0	0/0:31,0:15:3.96:0,4,76	0/0:50,0:23:10.56:0,11,185	1/1:12,7:19:42.12:721,42,0	1/1:10,3:13:21.07:403,21,0	1/1:5,3:8:12.04:219,12,0	0/0:25,0:25:48.14:0,48,1174	0/0:6,0:6:6.02:0,6,136	1/1:11,8:18:39.13:698,39,0	1/1:9,7:16:30.09:505,30,0	1/1:3,2:5:9.03:149,9,0	1/1:5,1:6:15.05:260,15,0	1/1:5,1:6:9.03:156,9,0	0/0:6,0:6:15.05:0,15,373	1/1:7,3:9:24.08:402,24,0	1/1:6,10:16:21.07:387,21,0	1/1:9,4:13:21.07:380,21,0	0/0:17,0:17:39.11:0,39,893	0/0:12,0:12:21.07:0,21,589	0/0:2,0:2:6.02:0,6,172	1/1:3,0:3:3.01:56,3,0	1/1:6,7:13:11.85:216,12,0	1/1:4,2:6:6.02:92,6,0	1/1:13,4:17:39.13:693,39,0	1/1:7,17:24:59.80:1056,60,0	0/0:18,0:18:48.16:0,48,1239	1/1:4,7:11:23.95:365,24,0
chr10	31615863	.	CTTGT	C	1191.24	PASS	AB=0.976;AC=24;AF=0.429;AN=56;BaseQRankSum=7.014;DP=424;FS=3.930;HRun=0;HaplotypeScore=121.3575;InbreedingCoeff=-0.0239;MQ=60.25;MQ0=7;MQRankSum=-6.751;QD=4.33;ReadPosRankSum=6.992;VQSLOD=1.3225;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:12,0:12:6.42:68,0,6	0/1:7,0:7:9.79:41,0,10	0/0:59,0:17:17.67:0,18,144	0/1:74,0:22:3.40:3,0,60	1/1:17,1:19:26.80:270,27,0	0/1:9,0:9:14.07:72,0,14	1/1:6,0:6:6.34:49,6,0	0/0:31,0:29:68.11:0,68,700	0/0:2,0:2:4.83:0,5,48	0/1:16,0:16:35.91:124,0,36	0/1:11,0:11:7.08:66,0,7	1/1:5,0:5:11.54:63,12,0	0/1:5,1:6:25.57:76,0,26	0/1:7,0:7:29.49:37,0,29	0/0:5,0:5:13.47:0,13,80	1/1:9,1:9:12.24:154,12,0	0/1:17,0:17:2.97:106,0,3	0/1:10,0:10:25.85:26,0,44	0/0:20,0:18:41.47:0,41,526	0/0:12,0:12:30.04:0,30,417	0/0:2,0:2:6.01:0,6,77	0/0:1,0:1:2.92:0,3,17	0/1:9,0:9:9.87:46,0,10	1/1:3,0:3:1.27:24,1,0	0/1:14,0:14:8.45:8,0,106	0/1:25,1:27:81.27:93,0,81	0/0:15,0:15:41.95:0,42,476	0/1:10,0:10:10.06:33,0,10
chr10	31615866	.	GTTTT	G	2641.56	PASS	AB=0.885;AC=34;AF=0.607;AN=56;BaseQRankSum=3.499;DP=431;FS=3.041;HRun=18;HaplotypeScore=114.2524;InbreedingCoeff=0.6060;MQ=59.86;MQ0=16;MQRankSum=-5.603;QD=13.34;ReadPosRankSum=3.182;VQSLOD=0.2225;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,4:11:10.49:156,10,0	1/1:4,2:7:2.13:77,2,0	0/0:67,0:18:14.99:0,15,101	0/0:76,0:22:4.36:0,4,17	1/1:9,7:19:46.37:445,46,0	1/1:6,2:10:4.79:153,5,0	1/1:3,2:5:4.67:70,5,0	0/0:25,0:27:36.38:0,36,399	0/0:1,0:2:1.28:0,1,24	1/1:11,6:17:19.22:227,19,0	1/1:7,3:11:26.15:212,26,0	1/1:3,0:5:11.86:87,12,0	0/1:4,1:5:9.79:87,0,10	1/1:6,0:7:2.24:107,2,0	0/0:4,0:4:2.54:0,3,22	1/1:6,4:9:24.84:240,25,0	1/1:9,6:16:24.01:262,24,0	1/1:8,2:10:11.48:107,11,0	0/0:19,0:17:36.53:0,37,512	0/0:7,0:13:21.03:0,21,335	0/0:3,0:2:4.26:0,4,41	0/0:1,0:1:0:0,0,0	1/1:7,2:9:14.51:139,15,0	1/1:3,0:3:2.86:18,3,0	0/1:14,1:15:1.38:84,0,1	1/1:19,4:23:15.86:248,16,0	0/0:13,0:13:22.60:0,23,310	1/1:10,1:10:8.93:104,9,0
chr10	31615888	.	CTT	C	659.85	PASS	AB=0.769;AC=26;AF=0.464;AN=56;BaseQRankSum=0.801;DP=381;FS=6.531;HRun=15;HaplotypeScore=87.3910;InbreedingCoeff=0.4848;MQ=38.32;MQ0=27;MQRankSum=-3.843;QD=3.75;ReadPosRankSum=1.440;VQSLOD=-0.4134;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:10,6:14:2.28:25,2,0	1/1:3,3:7:5.70:38,6,0	0/0:43,0:7:0:0,0,0	0/0:44,0:5:3.26:0,3,10	1/1:13,5:20:8.52:64,9,0	1/1:7,9:16:14.92:132,15,0	1/1:5,3:6:2.91:26,3,0	0/0:23,0:21:15.01:0,15,181	0/0:1,0:1:2.99:0,3,24	1/1:14,3:16:2.38:26,2,0	0/0:9,3:13:0:0,0,0	1/1:5,0:5:5.39:41,5,0	0/1:3,4:8:9.38:51,0,9	0/0:7,1:8:0:0,0,0	0/0:7,0:7:6.02:0,6,82	1/1:7,6:12:11.81:96,12,0	1/1:10,6:14:11.86:105,12,0	0/1:10,0:9:3.98:4,0,6	0/0:25,0:19:20.70:0,21,202	0/0:14,0:13:25.18:0,25,241	0/0:5,0:5:3.01:0,3,41	0/0:0,1:1:0:0,0,0	1/1:8,1:8:2.47:26,2,0	0/0:3,0:3:0:0,0,0	1/1:5,4:9:5.97:53,6,0	1/1:18,2:20:13.98:128,14,0	0/0:9,0:10:17.54:0,18,150	0/0:5,1:5:0:0,0,0
chr10	31616507	.	TCCCCCCCCCC	T	4898.99	PASS	AB=0.826;AC=26;AF=0.464;AN=56;BaseQRankSum=-3.972;DP=454;FS=3.136;HRun=11;HaplotypeScore=188.2344;InbreedingCoeff=-0.2044;MQ=63.30;MQ0=8;MQRankSum=-0.393;QD=15.07;ReadPosRankSum=0.455;VQSLOD=1.3711;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:25,1:28:51.63:52,0,181	0/1:7,2:9:54.36:166,0,54	0/0:20,1:12:36.06:0,36,940	0/0:33,0:18:21.70:0,22,873	0/1:12,2:15:99:253,0,166	1/1:12,3:16:5.89:163,6,0	1/1:15,5:22:6.01:186,6,0	0/0:20,0:21:45.79:0,46,1455	0/1:14,1:17:99:261,0,174	0/1:16,1:17:70.78:71,0,144	1/1:7,2:9:12.04:325,12,0	0/1:11,1:13:99:358,0,174	0/1:9,5:15:99:312,0,181	0/1:11,1:13:99:281,0,151	1/1:18,5:22:8.81:259,9,0	0/1:14,2:17:99:143,0,197	0/1:10,5:16:40.42:319,0,40	0/1:9,0:10:61.70:62,0,117	0/0:11,0:11:24.51:0,25,626	0/0:12,0:11:27.01:0,27,867	0/0:7,0:12:24.55:0,25,813	0/1:16,1:19:99:345,0,106	0/1:10,3:13:40.28:347,0,40	0/1:16,1:19:69.72:152,0,70	1/1:7,1:9:9.03:267,9,0	0/1:8,0:11:99:161,0,129	0/0:8,0:10:30.09:0,30,885	0/1:7,3:10:62.56:414,0,63
chr10	31616517	.	C	CT	1134.49	PASS	AB=0.972;AC=36;AF=0.643;AN=56;BaseQRankSum=-0.358;DP=550;FS=10.564;HRun=0;HaplotypeScore=228.9119;InbreedingCoeff=-0.0353;MQ=52.74;MQ0=14;MQRankSum=-1.166;QD=2.47;ReadPosRankSum=-2.733;VQSLOD=1.0847;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:36,0:36:13.99:33,0,14	1/1:13,0:12:11.68:45,12,0	0/0:23,0:11:1.63:0,2,145	0/0:33,0:16:19.92:0,20,218	0/0:23,0:23:2.33:0,2,21	1/1:20,0:20:0.21:43,0,0	1/1:20,0:20:1.74:22,2,0	0/1:13,6:19:18.69:93,0,19	1/1:23,0:22:8.79:89,9,0	1/1:23,0:21:18.86:112,19,0	1/1:14,0:14:10.89:75,11,0	0/1:20,0:19:9.89:32,0,10	0/1:23,0:22:17.34:34,0,17	0/1:18,0:16:7.71:36,0,8	1/1:21,0:20:5.16:22,5,0	0/1:24,0:23:2.69:73,0,3	1/1:16,0:16:4.66:52,5,0	0/1:14,0:14:5.08:39,0,5	1/1:10,2:8:11.16:97,11,0	0/0:10,1:9:2.53:0,3,24	0/1:14,0:11:3.82:60,0,4	0/1:24,0:24:3.51:4,0,11	1/1:19,0:19:0.63:43,1,0	0/1:23,0:22:3.95:9,0,4	1/1:17,0:17:8.81:43,9,0	1/1:18,0:17:14.30:139,14,0	0/1:12,1:11:35.80:38,0,36	0/1:15,0:15:1.96:51,0,2
chr10	31617436	.	CT	C	1464.66	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=10.692;DP=604;FS=5.540;HRun=1;HaplotypeScore=63.6532;InbreedingCoeff=0.9989;MQ=80.78;MQ0=0;MQRankSum=-4.286;QD=29.29;ReadPosRankSum=2.530;VQSLOD=3.3298;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:75.26:0,75,1195	1/1:0,14:14:39.12:467,39,0	0/0:15,0:15:45.14:0,45,676	0/0:16,0:16:45.12:0,45,658	0/0:32,0:32:96.33:0,96,1534	1/1:2,22:24:63.19:745,63,0	1/1:0,12:12:33.10:395,33,0	0/0:34,0:34:99:0,102,1629	0/0:23,0:23:69.24:0,69,1103	0/0:36,0:36:99:0,108,1629	0/0:36,0:36:99:0,108,1700	0/0:16,0:16:48.04:0,48,694	0/0:21,0:21:63.21:0,63,1007	0/0:12,0:12:36.11:0,36,552	0/0:24,0:24:72.23:0,72,1128	0/0:11,0:11:33.09:0,33,476	0/0:12,0:12:36.12:0,36,574	0/0:17,0:17:51.15:0,51,789	0/0:27,0:27:78.25:0,78,1202	0/0:33,0:33:99:0,99,1530	0/0:13,0:13:39.12:0,39,599	0/0:25,0:25:75.23:0,75,1151	0/0:24,0:24:72.23:0,72,1124	0/0:9,0:9:24.08:0,24,381	0/0:27,0:26:81.27:0,81,1267	0/0:21,0:21:63.20:0,63,963	0/0:26,0:25:78.25:0,78,1219	0/0:19,0:19:54.18:0,54,861
chr10	31618673	.	TACACACACACACACACACACACACACACAC	T	2239.28	PASS	AB=0.775;AC=25;AF=0.481;AN=52;BaseQRankSum=4.470;DP=461;FS=9.159;HRun=0;HaplotypeScore=265.2188;InbreedingCoeff=0.5549;MQ=71.78;MQ0=23;MQRankSum=0.347;QD=10.37;ReadPosRankSum=-1.184;VQSLOD=0.5565;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:20:3.35:49,3,0	0/0:5,0:5:3.01:0,3,89	0/0:33,0:17:5.68:0,6,85	0/0:39,0:26:3.01:0,3,40	1/1:8,14:22:6.02:349,6,0	0/0:14,0:14:9.03:0,9,299	0/0:17,0:17:3.47:0,3,112	0/0:24,0:22:18.06:0,18,612	0/0:7,0:7:12.04:0,12,693	1/1:6,8:14:14.78:129,15,0	0/1:6,8:13:0:0,0,0	1/1:7,10:17:6.02:458,6,0	1/1:14,0:14:8.98:117,9,0	1/1:9,0:9:3.01:69,3,0	0/0:15,0:14:18.06:0,18,1007	1/1:7,10:17:3.01:229,3,0	./.	0/1:13,0:12:9.01:40,0,9	0/0:11,0:11:21.07:0,21,994	0/0:9,0:15:9.03:0,9,476	0/0:27,0:23:33.09:0,33,1589	1/1:7,0:6:8.98:72,9,0	./.	1/1:13,0:11:3.01:74,3,0	0/1:12,10:22:4.81:223,0,5	1/1:10,6:15:9.30:143,9,0	0/0:14,0:14:26.55:0,27,1131	1/1:1,14:15:6.02:458,6,0
chr10	31619425	.	AG	A	4881.07	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=12.596;DP=543;FS=0.704;HRun=4;HaplotypeScore=232.4691;InbreedingCoeff=0.9611;MQ=85.38;MQ0=0;MQRankSum=-15.435;QD=15.30;ReadPosRankSum=3.373;VQSLOD=3.5394;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:13,18:31:53.26:341,53,0	1/1:0,3:3:8.18:50,8,0	0/0:28,0:28:72:0,72,986	0/0:23,0:23:63.21:0,63,876	1/1:9,19:28:9.78:162,10,0	1/1:2,18:20:53.01:373,53,0	1/1:0,8:8:23.84:172,24,0	0/0:28,0:28:75.25:0,75,1050	0/0:18,0:18:33.49:0,33,127	1/1:4,21:25:66.81:507,67,0	1/1:1,15:16:26.76:193,27,0	1/1:6,11:17:35.16:248,35,0	1/1:3,7:10:23.84:173,24,0	1/1:6,18:24:60.71:417,61,0	0/0:19,0:19:40.69:0,41,137	1/1:6,11:17:37.68:260,38,0	1/1:4,14:18:41.72:304,42,0	1/1:0,7:7:20.93:165,21,0	0/0:24,0:24:66.20:0,66,893	0/0:22,0:22:63.21:0,63,882	0/0:28,0:28:84.27:0,84,1159	1/1:3,10:13:26.71:184,27,0	1/1:1,16:17:46.70:308,47,0	1/1:3,7:10:14.88:107,15,0	1/1:8,25:33:73.94:483,74,0	1/1:3,17:20:50.71:388,51,0	0/0:34,0:34:99:0,102,1427	1/1:0,2:2:5.98:45,6,0
chr10	31619429	.	GATACTTCCTGTGAC	G	34605.19	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=17.370;DP=488;FS=3.500;HRun=0;HaplotypeScore=247.5596;InbreedingCoeff=0.9634;MQ=88.56;MQ0=0;MQRankSum=-17.608;QD=115.35;ReadPosRankSum=5.885;VQSLOD=4.6087;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:20:57.20:2309,57,0	1/1:3,0:3:9.03:371,9,0	0/0:28,0:28:81.28:0,81,4546	0/0:23,0:23:63.22:0,63,3641	1/1:21,0:21:41.16:1515,41,0	1/1:18,0:18:54.19:2310,54,0	1/1:8,0:8:24.08:1034,24,0	0/0:28,0:28:81.28:0,81,4823	1/1:0,16:17:45.15:1986,45,0	1/1:23,0:23:69.24:2879,69,0	1/1:16,0:16:39.05:1388,39,0	1/1:12,0:12:36.10:1427,36,0	1/1:8,0:8:24.07:928,24,0	1/1:21,0:21:63.20:2466,63,0	1/1:0,20:20:54.19:2382,54,0	1/1:12,0:12:36.12:1480,36,0	1/1:15,0:15:42.14:1809,42,0	1/1:7,0:7:21.07:903,21,0	0/0:25,0:25:72.25:0,72,4331	0/0:21,0:21:63.22:0,63,4106	0/0:28,0:28:84.29:0,84,5892	1/1:10,0:10:27.09:1156,27,0	1/1:16,0:16:48.16:2039,48,0	1/1:8,0:8:11.78:516,12,0	1/1:26,0:26:78.27:3254,78,0	1/1:17,0:17:51.18:2195,51,0	0/0:35,0:35:99:0,105,7308	1/1:2,0:2:6.02:259,6,0
chr10	31619430	.	ATACTTCCTGTGAC	A	28956.29	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=17.799;DP=481;FS=3.513;HRun=0;HaplotypeScore=254.4730;InbreedingCoeff=0.9633;MQ=88.19;MQ0=0;MQRankSum=-17.726;QD=97.83;ReadPosRankSum=6.264;VQSLOD=4.6202;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,17:20:57.20:1980,57,0	1/1:0,3:3:9.03:319,9,0	0/0:28,0:28:81.28:0,81,4308	0/0:22,0:22:63.22:0,63,3540	1/1:2,19:21:40.08:1263,40,0	1/1:0,18:18:54.19:1988,54,0	1/1:0,8:8:24.08:890,24,0	0/0:28,0:28:81.28:0,81,4580	1/1:17,0:17:45.15:1367,45,0	1/1:2,21:23:69.23:2506,69,0	1/1:1,15:16:39.13:1187,39,0	1/1:0,11:11:33.11:1212,33,0	1/1:0,7:7:21.07:778,21,0	1/1:2,18:20:60.21:2093,60,0	1/1:20,0:20:54.19:1633,54,0	1/1:1,11:12:36.12:1275,36,0	1/1:1,14:15:42.14:1561,42,0	1/1:0,7:7:21.07:793,21,0	0/0:24,0:24:72.25:0,72,4135	0/0:21,0:21:63.20:0,63,3863	0/0:28,0:28:84.29:0,84,5546	1/1:0,10:10:27.09:992,27,0	1/1:0,16:16:48.16:1743,48,0	1/1:0,7:7:12.04:442,12,0	1/1:1,25:26:78.27:2795,78,0	1/1:0,17:17:51.18:1914,51,0	0/0:34,0:34:99:0,102,6871	1/1:0,2:2:6.02:225,6,0
chr10	31619442	.	AC	A	6014.57	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=17.503;DP=484;FS=2.522;HRun=3;HaplotypeScore=219.8540;InbreedingCoeff=0.9733;MQ=83.60;MQ0=0;MQRankSum=-16.984;QD=19.72;ReadPosRankSum=3.212;VQSLOD=4.2766;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:18,3:21:52.73:413,53,0	1/1:5,0:5:14.49:116,14,0	0/0:27,0:27:74.99:0,75,1049	0/0:18,0:19:49.04:0,49,655	1/1:20,0:20:35.42:260,35,0	1/1:18,0:18:53.50:426,54,0	1/1:9,0:9:26.96:222,27,0	0/0:26,0:26:75.21:0,75,999	1/1:17,0:17:33.45:107,33,0	1/1:24,1:25:71.50:618,71,0	1/1:15,0:15:30.37:219,30,0	1/1:11,0:11:32.54:258,33,0	1/1:7,0:7:20.96:171,21,0	1/1:18,0:18:53.86:436,54,0	1/1:20,0:20:38.32:120,38,0	1/1:13,0:13:38.55:310,39,0	1/1:14,0:14:41.93:346,42,0	1/1:7,3:10:23.98:206,24,0	0/0:22,0:22:66.22:0,66,947	0/0:16,0:16:48.16:0,48,691	0/0:29,0:29:87.26:0,87,1215	1/1:11,0:11:29.91:239,30,0	1/1:16,0:16:47.51:359,48,0	1/1:8,0:8:14.97:123,15,0	1/1:25,2:27:76.10:575,76,0	1/1:18,0:18:50.95:440,51,0	0/0:40,0:40:99:0,114,1618	1/1:2,0:2:6:51,6,0
chr10	31620503	.	A	AAAC	424.67	PASS	AB=0.727;AC=21;AF=0.375;AN=56;BaseQRankSum=10.613;DP=480;FS=21.882;HRun=0;HaplotypeScore=118.6673;InbreedingCoeff=-0.4170;MQ=61.61;MQ0=9;MQRankSum=-2.284;QD=1.32;ReadPosRankSum=-2.614;VQSLOD=0.2676;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:31:0.53:1,0,478	0/1:2,0:8:7.09:7,0,76	0/0:40,0:21:59.63:0,60,744	0/0:34,0:13:26.92:0,27,329	0/1:14,0:17:43.39:43,0,335	0/0:15,0:21:16.75:0,17,371	0/1:7,0:10:40.06:40,0,86	0/1:19,0:19:66.54:67,0,319	0/0:6,0:18:9.01:0,9,137	0/1:4,0:9:39.74:40,0,61	0/1:11,0:17:19.23:19,0,236	0/1:5,0:15:30.31:30,0,65	0/1:10,0:19:7.57:8,0,111	0/0:6,0:10:5.39:0,5,138	1/1:5,1:14:8.59:41,9,0	0/1:16,0:20:19.41:19,0,411	0/1:8,0:18:1:1,0,193	0/1:13,0:19:18.63:19,0,367	0/1:10,0:13:35.32:35,0,318	0/1:5,1:17:55.56:56,0,58	0/0:6,0:11:5.78:0,6,71	0/0:9,0:9:16.51:0,17,212	0/1:14,0:17:71.47:71,0,198	0/1:12,0:23:56.16:56,0,191	0/1:3,0:9:10.19:10,0,12	0/0:8,0:13:2.09:0,2,155	0/1:6,0:18:9.63:10,0,127	0/1:2,0:3:3.35:3,0,38
chr10	31620523	.	CAT	C	2767.92	PASS	AB=0.984;AC=38;AF=0.679;AN=56;BaseQRankSum=-8.460;DP=498;FS=5.222;HRun=0;HaplotypeScore=102.8717;InbreedingCoeff=-0.1894;MQ=52.24;MQ0=10;MQRankSum=0.951;QD=6.44;ReadPosRankSum=-10.032;VQSLOD=-0.1077;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:32,1:33:93.52:151,0,94	0/1:8,0:8:17.29:18,0,17	0/0:36,0:14:8.36:0,8,164	0/0:31,0:11:10.95:0,11,144	0/1:21,1:22:44.51:235,0,45	0/1:19,1:20:22.02:120,0,22	1/1:12,0:12:18.61:135,19,0	1/1:17,0:17:14.35:239,14,0	1/1:20,0:19:17.19:129,17,0	1/1:13,0:13:12.94:153,13,0	0/1:18,1:19:6.75:101,0,7	0/1:18,0:18:10.72:69,0,11	1/1:18,0:18:4.21:78,4,0	0/1:10,0:10:16.40:59,0,16	0/1:16,0:15:3.77:45,0,4	0/1:18,0:18:69.28:72,0,69	1/1:24,1:25:27.22:276,27,0	0/1:17,0:17:33.64:34,0,100	1/1:8,0:8:14.76:118,15,0	0/1:18,0:16:7:65,0,7	1/1:11,0:10:5.99:50,6,0	1/1:7,0:7:5.84:87,6,0	0/1:17,1:18:40.79:59,0,41	0/1:27,0:25:3.57:127,0,4	1/1:11,0:11:4.84:48,5,0	0/1:20,0:20:25.51:239,0,26	1/1:21,0:21:22.01:179,22,0	1/1:1,2:3:1.07:41,1,0
chr10	31621005	.	GTC	G	2491.75	PASS	AB=0.988;AC=24;AF=0.480;AN=50;BaseQRankSum=-0.382;DP=510;FS=3.657;HRun=0;HaplotypeScore=116.5769;InbreedingCoeff=0.5075;MQ=74.38;MQ0=8;MQRankSum=-1.906;QD=8.53;ReadPosRankSum=1.077;VQSLOD=3.5459;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:15:10.77:0,11,87	0/0:4,0:10:3.15:0,3,11	0/1:38,1:21:9.21:9,0,163	0/0:54,0:31:26.55:0,27,301	0/0:18,0:17:5.46:0,5,54	1/1:11,0:32:3.37:24,3,0	1/1:1,0:12:5.38:27,5,0	1/1:23,8:30:28.78:504,29,0	0/0:17,0:17:2.99:0,3,25	1/1:20,0:20:10.39:47,10,0	./.	./.	1/1:17,0:17:6:22,6,0	0/0:9,0:9:3:0,3,25	0/0:13,0:13:3:0,3,25	1/1:6,0:6:1.41:3,1,0	0/0:11,0:11:4.34:0,4,25	0/0:9,0:7:7.78:0,8,47	1/1:7,11:18:33.09:403,33,0	1/1:10,10:21:36.11:449,36,0	1/1:8,22:30:42.13:539,42,0	0/0:11,0:11:4.35:0,4,28	0/0:7,0:7:0.47:0,0,1	1/1:16,0:16:0.84:2,1,0	0/0:13,0:12:7.35:0,7,52	0/1:20,0:20:36.62:37,0,110	1/1:9,21:30:50.33:588,50,0	./.
chr10	31621013	.	C	CTCTCTG	320.45	PASS	AB=1.000;AC=7;AF=0.135;AN=52;BaseQRankSum=2.738;DP=501;FS=1.098;HRun=0;HaplotypeScore=149.7933;InbreedingCoeff=0.5270;MQ=63.33;MQ0=14;MQRankSum=-0.811;QD=3.48;ReadPosRankSum=0.648;VQSLOD=2.7763;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:13:12.70:0,13,89	1/1:9,2:11:8.91:87,9,0	0/1:32,0:14:7.42:7,0,285	0/0:48,0:25:37.15:0,37,453	0/0:17,0:16:14.86:0,15,111	1/1:30,3:33:10.39:219,10,0	1/1:16,0:15:6.49:132,6,0	0/0:35,0:34:85.80:0,86,727	0/0:17,0:17:5.96:0,6,49	0/0:21,0:21:19.63:0,20,247	./.	./.	0/0:19,0:19:10.11:0,10,55	0/0:13,0:12:5.99:0,6,50	0/0:13,0:12:8.99:0,9,75	0/0:5,0:5:2.92:0,3,17	0/0:10,0:10:4.84:0,5,28	0/0:9,0:7:10.57:0,11,64	0/0:20,0:20:47.83:0,48,493	0/0:21,0:20:44.89:0,45,552	0/0:29,0:28:48.12:0,48,696	0/0:11,0:11:8.70:0,9,67	0/0:7,0:6:2.47:0,2,24	0/0:13,0:13:9.26:0,9,63	0/0:11,0:10:12.85:0,13,98	0/0:18,0:18:37.55:0,38,443	0/0:31,0:30:23.75:0,24,726	0/0:3,0:3:5.99:0,6,49
chr10	31621019	.	CTCTCTGTCTCTCTCTCTGTCTCTCTCTCTG	C	791.13	PASS	AB=0.972;AC=24;AF=0.462;AN=52;BaseQRankSum=-6.745;DP=496;FS=2.657;HRun=0;HaplotypeScore=266.3933;InbreedingCoeff=-0.1745;MQ=57.53;MQ0=16;MQRankSum=2.747;QD=2.50;ReadPosRankSum=-3.688;VQSLOD=2.1113;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:14,0:13:57.12:74,0,57	0/1:11,0:11:11.81:12,0,160	0/1:29,0:11:23.43:23,0,110	0/1:41,0:19:15.21:15,0,202	1/1:18,0:17:5.03:87,5,0	0/0:33,0:33:4.99:0,5,367	0/1:17,0:15:22.31:22,0,39	0/0:33,0:32:42.78:0,43,2632	0/1:3,13:16:0:0,0,0	0/1:20,0:20:8.75:9,0,1156	0/1:13,0:12:0:0,0,0	./.	0/1:20,0:20:4.57:5,0,115	./.	1/1:9,0:8:5.99:50,6,0	0/1:5,0:5:59.80:60,0,65	0/1:12,0:12:99:132,0,137	1/1:9,0:7:11.27:87,11,0	0/1:20,0:19:3.15:3,0,2101	0/0:23,0:22:20.07:0,20,2021	0/0:30,0:28:44.20:0,44,2266	0/1:11,0:11:38.09:38,0,70	1/1:9,0:8:8.99:74,9,0	0/1:14,0:14:41.41:41,0,85	0/1:10,0:9:37.92:86,0,38	0/1:18,0:17:99:125,0,382	0/0:29,0:28:53.83:0,54,2864	0/0:3,0:3:3.01:0,3,115
chr10	31621023	.	CTGTCTCTCTCTCTG	C	3830.21	PASS	AB=0.997;AC=38;AF=0.760;AN=50;BaseQRankSum=-5.380;DP=518;FS=5.828;HRun=0;HaplotypeScore=180.2173;InbreedingCoeff=-0.0286;MQ=54.70;MQ0=15;MQRankSum=1.368;QD=8.71;ReadPosRankSum=-1.474;VQSLOD=2.2463;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:15:14.67:147,15,0	0/1:12,0:12:19:31,0,19	0/1:26,0:10:23.59:24,0,48	0/1:37,0:15:7.84:8,0,158	1/1:19,1:19:1.55:64,2,0	0/0:33,0:33:1.40:0,1,167	0/1:19,0:16:1.45:7,0,1	0/1:37,0:36:51.32:51,0,614	0/1:15,0:15:0:0,0,0	1/1:0,17:20:56.80:1066,57,0	./.	./.	1/1:0,17:19:9.03:304,9,0	./.	1/1:6,0:6:3:25,3,0	1/1:10,0:12:11.97:128,12,0	1/1:13,0:13:23.78:222,24,0	1/1:10,0:7:9.85:67,10,0	0/1:18,0:17:60.93:61,0,329	0/1:23,0:22:14.45:14,0,386	0/1:30,0:28:0.49:0,0,345	1/1:12,0:14:17.65:183,18,0	1/1:10,0:11:8.99:74,9,0	1/1:13,0:14:12:153,12,0	1/1:13,0:12:11.98:98,12,0	1/1:15,0:20:43.92:994,44,0	0/1:27,0:27:84.18:84,0,346	1/1:2,0:2:5.47:25,5,0
chr10	31621035	.	CTGTCTCTCTCTCTG	C	3647.28	PASS	AB=0.989;AC=30;AF=0.600;AN=50;BaseQRankSum=-2.012;DP=513;FS=7.951;HRun=0;HaplotypeScore=190.3443;InbreedingCoeff=0.4734;MQ=41.67;MQ0=15;MQRankSum=-0.132;QD=11.62;ReadPosRankSum=-2.893;VQSLOD=1.4580;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:17,1:17:11.79:118,12,0	0/1:14,0:14:21.29:31,0,21	0/0:10,0:3:2.99:0,3,24	0/0:19,0:2:5.85:0,6,44	1/1:24,2:22:14.57:121,15,0	0/0:29,0:29:0.73:0,1,162	0/1:21,0:18:2.91:11,0,3	0/0:38,0:38:23.62:0,24,954	0/1:17,0:17:0:0,0,0	1/1:17,0:20:50.84:1024,51,0	./.	./.	1/1:17,0:19:9.03:303,9,0	./.	0/1:10,0:9:0:0,0,0	1/1:13,1:14:14.95:151,15,0	1/1:13,0:13:17.98:192,18,0	1/1:6,0:3:5.96:43,6,0	0/0:20,0:19:10.51:0,11,750	0/0:26,0:25:45.06:0,45,837	0/1:35,0:33:4.19:4,0,865	1/1:12,1:14:14.66:160,15,0	0/0:11,1:12:0:0,0,0	1/1:12,1:13:6.47:101,6,0	1/1:18,0:17:17.98:152,18,0	1/1:20,4:23:65.69:1114,66,0	0/1:25,0:26:31.12:31,0,935	1/1:5,0:5:14.59:91,15,0
chr10	31621041	.	CTCTCTCTG	C	1923.74	PASS	AB=1.000;AC=30;AF=0.652;AN=46;BaseQRankSum=3.071;DP=506;FS=19.572;HRun=0;HaplotypeScore=175.1052;InbreedingCoeff=0.0742;MQ=39.40;MQ0=18;MQRankSum=0.164;QD=5.42;ReadPosRankSum=2.584;VQSLOD=1.6646;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:17,0:16:7.75:33,0,8	0/1:15,0:15:2.45:27,0,2	./.	./.	0/1:25,0:21:8.52:19,0,9	0/0:31,0:30:6.41:0,6,61	0/0:21,0:18:8.34:0,8,32	0/1:40,0:38:99:255,0,162	./.	1/1:19,2:21:37.82:545,38,0	1/1:15,0:14:0.47:1,0,0	1/1:15,0:14:0.89:2,1,0	1/1:17,2:19:8.87:170,9,0	./.	./.	1/1:14,0:14:9.36:62,9,0	1/1:13,0:13:8.46:68,8,0	1/1:7,0:4:8.89:59,9,0	0/1:20,0:18:70.92:71,0,83	0/0:27,0:26:3.68:0,4,211	0/1:31,0:29:55.07:55,0,99	1/1:14,1:15:8.69:68,9,0	0/0:12,1:12:0:0,0,0	1/1:14,0:14:1.40:35,1,0	1/1:19,0:18:5.21:29,5,0	1/1:23,0:22:10.60:419,11,0	0/1:25,0:24:99:122,0,145	0/1:7,0:6:0.46:16,0,0
chr10	31621045	.	CTCTG	C	2527.33	PASS	AB=0.961;AC=39;AF=0.780;AN=50;BaseQRankSum=3.567;DP=512;FS=6.720;HRun=0;HaplotypeScore=161.3792;InbreedingCoeff=-0.1035;MQ=39.37;MQ0=19;MQRankSum=-0.268;QD=5.41;ReadPosRankSum=3.043;VQSLOD=1.9430;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:17,0:16:11.99:53,0,12	0/1:11,2:13:0.06:68,0,0	./.	./.	0/1:24,0:20:1.04:60,0,1	0/1:28,3:30:14.57:15,0,21	0/1:17,3:17:1.79:2,0,13	0/1:43,0:40:99:292,0,134	./.	1/1:21,0:21:42.26:403,42,0	1/1:14,0:13:3.47:26,3,0	1/1:16,1:16:0.88:2,1,0	1/1:17,0:17:11.92:114,12,0	1/1:15,0:14:5.99:49,6,0	1/1:12,0:11:2.94:18,3,0	1/1:17,0:17:21.33:158,21,0	1/1:14,0:14:12.63:101,13,0	1/1:8,0:5:11.89:82,12,0	0/1:21,0:19:99:136,0,107	0/1:27,0:26:70.56:123,0,71	1/1:32,0:30:0.47:228,0,0	1/1:15,0:15:8.83:70,9,0	0/0:14,0:13:0:0,0,0	1/1:14,0:14:5.89:43,6,0	1/1:19,0:19:10.88:83,11,0	1/1:23,0:22:13.19:285,13,0	0/1:26,0:25:93.95:175,0,94	1/1:7,0:6:7.98:66,8,0
chr10	31621047	.	CTG	C	1912.95	PASS	AB=0.986;AC=38;AF=0.760;AN=50;BaseQRankSum=0.376;DP=500;FS=0.000;HRun=0;HaplotypeScore=153.2015;InbreedingCoeff=0.0348;MQ=39.43;MQ0=20;MQRankSum=0.224;QD=4.42;ReadPosRankSum=0.720;VQSLOD=2.4798;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:18,0:17:8.98:74,0,9	1/1:12,0:12:0.48:52,0,0	./.	./.	0/1:24,0:20:1.06:61,0,1	0/1:29,1:29:18.72:32,0,19	0/1:18,1:16:2.73:3,0,12	0/1:42,0:38:99:106,0,167	./.	1/1:22,0:22:54.12:413,54,0	1/1:14,0:13:6.46:50,6,0	1/1:17,0:16:0.89:2,1,0	1/1:17,0:17:11.87:86,12,0	1/1:13,1:13:5.99:49,6,0	1/1:12,0:11:2.94:18,3,0	1/1:17,0:17:23.85:181,24,0	1/1:14,0:14:14.55:110,15,0	1/1:8,0:5:11.89:83,12,0	0/1:21,0:19:33.89:34,0,145	0/0:26,1:26:24.93:0,25,139	0/1:31,1:30:48.31:48,0,94	1/1:15,0:15:8.98:73,9,0	0/0:14,0:13:0:0,0,0	1/1:14,0:14:5.67:43,6,0	1/1:17,0:17:14.96:110,15,0	1/1:22,0:21:30.05:286,30,0	0/1:25,0:24:30.72:31,0,133	1/1:7,0:6:15.72:107,16,0
chr10	31621049	.	GTCTCTC	G	3468.26	PASS	AB=1.000;AC=15;AF=0.288;AN=52;BaseQRankSum=-2.805;DP=486;FS=63.478;HRun=0;HaplotypeScore=164.1635;InbreedingCoeff=0.3558;MQ=39.14;MQ0=20;MQRankSum=-1.266;QD=15.21;ReadPosRankSum=5.932;VQSLOD=0.6947;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:15:3.38:0,3,8	0/1:12,0:12:8.52:9,0,22	./.	./.	0/0:22,0:18:12.40:0,12,93	0/0:29,0:28:12.94:0,13,93	0/0:20,0:17:6.09:0,6,25	1/1:16,22:34:63.43:1008,63,0	0/0:18,0:18:2.96:0,3,20	0/1:22,0:22:89.54:162,0,90	0/0:14,0:13:3.46:0,3,25	0/0:16,0:15:2.99:0,3,23	0/1:17,0:17:6.47:75,0,6	0/0:14,0:13:0:0,0,0	0/0:12,0:11:0.47:0,0,1	0/1:17,0:17:1.49:1,0,35	0/0:14,0:14:6.36:0,6,31	0/0:9,0:6:5.54:0,6,25	1/1:16,3:19:33.11:585,33,0	1/1:8,7:25:20.64:292,21,0	1/1:28,1:30:30.47:651,30,0	0/0:14,0:14:8.24:0,8,50	0/0:14,0:13:0:0,0,0	0/0:14,0:14:0.24:0,0,22	0/0:16,0:16:12.52:0,13,95	0/1:21,0:20:99:133,0,197	1/1:16,3:22:35.58:552,36,0	0/0:7,0:6:13.14:0,13,95
chr10	31621067	.	CTGTG	C	416.80	PASS	AB=0.940;AC=17;AF=0.315;AN=54;BaseQRankSum=-0.032;DP=534;FS=2.040;HRun=0;HaplotypeScore=165.3067;InbreedingCoeff=0.2332;MQ=40.65;MQ0=20;MQRankSum=4.251;QD=1.87;ReadPosRankSum=3.137;VQSLOD=2.7949;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:19:4.49:58,4,0	0/0:10,0:10:13.10:0,13,173	0/0:9,0:2:6.01:0,6,62	0/0:4,0:3:9.03:0,9,105	0/1:27,0:26:13.71:139,0,14	0/0:33,0:32:9.50:0,10,178	0/0:25,0:22:9.50:0,10,132	0/0:39,0:35:50.97:0,51,650	0/0:15,0:15:8.94:0,9,129	0/1:26,0:26:10.69:11,0,78	0/0:19,0:19:5.65:0,6,29	1/1:14,0:13:6:64,6,0	1/1:14,0:14:12.04:171,12,0	1/1:15,0:14:0.32:1,0,0	./.	0/1:17,0:17:6.51:7,0,63	0/0:15,0:15:3.42:0,3,47	0/1:13,0:10:24.99:34,0,25	0/0:17,0:16:26.15:0,26,213	0/0:26,0:25:4.54:0,5,138	0/0:37,0:35:32.17:0,32,502	0/0:19,0:19:15.35:0,15,218	0/1:8,14:20:0.20:0,0,0	1/1:13,0:13:2.25:46,2,0	0/1:17,0:17:25.85:26,0,42	0/0:22,0:21:29.33:0,29,445	0/1:22,0:21:8.72:9,0,219	0/0:8,0:6:8.98:0,9,130
chr10	31621490	.	T	TA	6854.47	PASS	AC=32;AF=0.615;AN=52;BaseQRankSum=-8.724;DP=304;FS=2.678;HRun=4;HaplotypeScore=32.6704;InbreedingCoeff=0.8710;MQ=69.74;MQ0=0;MQRankSum=-1.980;QD=37.87;ReadPosRankSum=4.146;VQSLOD=4.1047;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,21:21:51.17:697,51,0	0/0:2,0:2:3.01:0,3,34	0/0:4,0:4:4.49:0,4,66	0/0:4,0:4:8.92:0,9,81	1/1:0,22:22:63.17:840,63,0	0/0:15,0:15:36.08:0,36,397	0/0:2,0:2:6.02:0,6,68	0/0:48,0:48:99:0,132,1498	1/1:0,4:4:12.04:164,12,0	1/1:0,10:10:30.10:411,30,0	1/1:0,11:11:33.11:451,33,0	1/1:0,8:8:24.08:328,24,0	1/1:0,3:3:9.03:123,9,0	1/1:0,2:2:6.02:82,6,0	1/1:1,4:5:12.04:164,12,0	1/1:0,4:4:12.04:164,12,0	1/1:1,15:16:45.15:615,45,0	1/1:2,22:24:63.21:862,63,0	0/0:10,0:10:30.09:0,30,340	0/0:15,0:15:42.12:0,42,476	0/0:6,0:6:12.03:0,12,136	./.	1/1:0,3:3:9.03:123,9,0	./.	1/1:1,22:23:63.21:862,63,0	1/1:1,15:16:45.13:599,45,0	0/0:17,0:17:51.15:0,51,579	1/1:0,9:9:27.09:369,27,0
chr10	31621558	.	A	ATG	3591.40	PASS	AB=0.942;AC=38;AF=0.679;AN=56;BaseQRankSum=-5.657;DP=462;FS=10.989;HRun=0;HaplotypeScore=121.2234;InbreedingCoeff=0.0399;MQ=60.95;MQ0=7;MQRankSum=4.880;QD=8.39;ReadPosRankSum=3.166;VQSLOD=2.9998;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:29:7.74:22,0,8	0/1:3,11:14:28.32:393,0,28	0/0:18,0:10:1.03:0,1,18	0/0:8,0:3:6.02:0,6,67	1/1:25,0:25:13.42:100,13,0	1/1:4,12:17:21.07:331,21,0	1/1:2,3:5:6.02:95,6,0	1/1:19,12:30:0.74:402,1,0	0/1:14,0:14:58.09:58,0,64	1/1:23,0:22:0.74:31,1,0	1/1:19,0:19:18.56:84,19,0	0/1:14,0:14:1.32:1,0,18	0/1:11,0:11:1.52:4,0,2	1/1:10,0:10:3.15:8,3,0	0/1:10,0:10:10.37:10,0,45	0/0:7,0:7:0.99:0,1,23	1/1:23,0:23:17.21:79,17,0	0/1:23,0:23:28.57:34,0,29	0/1:17,9:25:55.28:328,0,55	1/1:3,13:16:27.09:424,27,0	1/1:1,18:18:27.09:426,27,0	0/1:9,0:9:1.01:1,0,3	0/1:9,0:7:1.46:1,0,11	1/1:8,0:8:3.33:9,3,0	1/1:21,0:21:14.75:112,15,0	0/1:16,0:16:1.64:48,0,2	1/1:6,14:19:36.59:568,37,0	0/1:16,0:16:5.80:21,0,6
chr10	31621579	.	TGC	T	6181.90	PASS	AB=1.000;AC=38;AF=0.679;AN=56;BaseQRankSum=7.059;DP=497;FS=1.427;HRun=0;HaplotypeScore=113.8991;InbreedingCoeff=0.6592;MQ=60.30;MQ0=11;MQRankSum=1.194;QD=17.17;ReadPosRankSum=-0.384;VQSLOD=4.8997;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:24,9:33:49.04:486,49,0	0/0:15,0:15:38.88:0,39,423	0/1:24,0:10:1.11:1,0,72	0/0:18,0:10:5.61:0,6,110	1/1:13,11:24:60.52:692,61,0	0/0:19,0:19:38.96:0,39,369	0/1:7,0:7:2:2,0,148	0/1:29,0:28:47.32:47,0,441	0/1:15,0:15:26.38:55,0,26	1/1:16,5:20:33.73:414,34,0	1/1:6,11:17:39.57:508,40,0	1/1:9,6:15:26.95:284,27,0	1/1:0,14:14:9.03:121,9,0	1/1:8,4:12:21.45:216,21,0	1/1:8,2:10:7.11:174,7,0	1/1:4,5:9:21.03:241,21,0	1/1:14,11:24:51.84:609,52,0	1/1:15,8:23:53.75:541,54,0	0/0:21,0:20:0.23:0,0,359	0/0:17,0:17:36.06:0,36,375	0/0:29,0:28:53.97:0,54,512	1/1:0,10:10:15.05:208,15,0	1/1:4,6:7:18.03:234,18,0	1/1:9,4:13:30:310,30,0	1/1:11,6:17:33.48:369,33,0	1/1:16,4:20:36.57:344,37,0	0/0:18,0:17:44.65:0,45,461	1/1:8,4:12:32.90:325,33,0
chr10	31621593	.	TATGC	T	5552.92	PASS	AB=1.000;AC=34;AF=0.607;AN=56;BaseQRankSum=7.914;DP=461;FS=3.566;HRun=0;HaplotypeScore=125.9739;InbreedingCoeff=0.8515;MQ=71.17;MQ0=8;MQRankSum=-3.439;QD=21.03;ReadPosRankSum=2.535;VQSLOD=4.7961;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:25,1:27:59.19:619,59,0	0/0:15,0:15:39.13:0,39,1082	0/0:18,0:9:23.96:0,24,404	0/0:24,0:18:26.82:0,27,863	1/1:19,1:20:50.40:481,50,0	0/0:15,0:15:39.13:0,39,1121	0/0:15,0:15:43.03:0,43,962	0/0:32,0:31:93.11:0,93,2259	0/1:16,0:16:72.74:73,0,95	1/1:13,0:13:29.68:376,30,0	1/1:15,0:15:23.94:287,24,0	1/1:8,2:10:20.91:230,21,0	1/1:17,0:17:17.37:202,17,0	1/1:11,0:11:17.93:199,18,0	0/1:9,0:9:7.41:98,0,7	1/1:10,0:9:23.74:269,24,0	1/1:24,0:23:48.35:487,48,0	1/1:16,4:20:35.21:658,35,0	0/0:13,0:13:39.13:0,39,1061	0/0:17,0:17:45.15:0,45,1215	0/0:30,0:29:78.27:0,78,1971	1/1:12,0:12:17.34:134,17,0	1/1:7,1:7:20.40:176,20,0	1/1:14,0:14:32.90:418,33,0	1/1:17,1:18:17.75:307,18,0	1/1:13,1:14:32.88:403,33,0	0/0:18,0:17:48.15:0,48,1245	1/1:5,1:6:14.69:135,15,0
chr10	31622542	.	T	TCTCTTGTTC	24272.44	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=7.241;DP=661;FS=0.000;HRun=0;HaplotypeScore=209.5910;InbreedingCoeff=0.9760;MQ=93.27;MQ0=0;MQRankSum=-15.579;QD=58.35;ReadPosRankSum=5.798;VQSLOD=3.9123;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,11:22:24.08:1104,24,0	0/0:7,0:7:21.07:0,21,595	0/0:32,0:32:61.47:0,61,1572	0/0:42,0:41:89.13:0,89,1903	1/1:7,6:22:27.01:1025,27,0	0/0:21,0:21:57.19:0,57,1598	0/0:25,0:25:72.21:0,72,1874	0/0:26,0:26:39.10:0,39,897	1/1:11,13:33:42.14:1964,42,0	1/1:16,12:33:51.16:2102,51,0	1/1:5,11:23:36.12:1678,36,0	1/1:12,10:26:30.10:1386,30,0	1/1:11,17:34:48.16:2246,48,0	1/1:8,12:25:27.09:1269,27,0	1/1:17,10:30:27.09:1270,27,0	1/1:9,14:30:42.14:1975,42,0	1/1:4,5:14:12.04:564,12,0	1/1:3,3:7:9.03:424,9,0	0/0:22,0:22:48.14:0,48,1211	0/0:27,0:27:78.23:0,78,2049	0/0:22,0:22:57.15:0,57,1433	1/1:10,12:28:36.12:1667,36,0	1/1:5,8:18:15.05:705,15,0	1/1:2,6:10:12.04:528,12,0	1/1:7,9:21:27.09:1267,27,0	1/1:10,13:33:66.14:2392,66,0	0/0:21,0:21:63.22:0,63,1830	1/1:1,5:6:15.05:706,15,0
chr10	31623924	.	CT	C	414.33	PASS	AB=0.866;AC=12;AF=0.222;AN=54;BaseQRankSum=10.286;DP=439;FS=22.881;HRun=8;HaplotypeScore=99.9761;InbreedingCoeff=-0.3062;MQ=59.30;MQ0=9;MQRankSum=-8.241;QD=2.17;ReadPosRankSum=1.886;VQSLOD=-0.4568;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:16,10:29:99:163,0,277	0/0:6,0:6:15.04:0,15,183	0/0:28,0:15:18.75:0,19,322	0/1:9,0:3:2.96:3,0,71	0/0:26,4:30:15.12:0,15,778	0/0:11,0:12:32.95:0,33,399	0/0:18,0:18:36.10:0,36,457	0/0:28,0:28:72.51:0,73,899	0/1:10,2:13:27.32:27,0,254	0/1:10,0:13:10.80:11,0,250	0/1:16,4:22:55.21:55,0,403	0/0:9,1:12:16.13:0,16,224	0/0:9,0:10:17.06:0,17,223	0/0:8,1:11:2.31:0,2,229	0/1:5,1:6:21.98:22,0,51	0/1:5,1:7:34.15:34,0,102	0/1:16,5:22:79.85:80,0,419	0/0:17,1:18:2.85:0,3,357	0/0:16,0:16:41.49:0,41,496	0/0:14,0:14:27.08:0,27,359	./.	0/0:8,1:9:3.38:0,3,185	0/0:11,0:12:26.29:0,26,325	0/1:12,2:15:11.49:11,0,247	0/1:16,4:20:40.23:40,0,400	0/1:11,3:17:60.20:60,0,249	0/0:22,0:21:55.45:0,55,645	0/1:13,4:17:49.72:50,0,341
chr10	31623941	.	TTTTTC	T	1627.98	PASS	AB=0.944;AC=17;AF=0.327;AN=52;BaseQRankSum=0.379;DP=418;FS=4.284;HRun=0;HaplotypeScore=147.1398;InbreedingCoeff=-0.3708;MQ=43.95;MQ0=13;MQRankSum=-1.726;QD=6.03;ReadPosRankSum=6.520;VQSLOD=2.1139;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:27,2:28:99:168,0,421	0/0:10,0:10:21.04:0,21,393	0/0:16,0:6:14.88:0,15,192	./.	0/1:29,1:29:99:136,0,180	0/0:12,0:12:33.09:0,33,599	0/0:13,0:12:18.04:0,18,387	0/0:24,0:22:63.02:0,63,1130	0/1:13,0:12:9.12:9,0,174	0/1:16,0:15:99:119,0,142	0/1:23,0:23:78.80:79,0,211	0/1:12,0:11:21.36:66,0,21	0/1:9,1:10:43.42:80,0,43	0/1:6,3:9:41.69:42,0,127	0/0:6,0:6:2.76:0,3,57	0/1:7,2:9:70.48:115,0,70	0/1:20,0:20:99:171,0,188	1/1:13,1:13:3.15:108,3,0	0/0:20,0:18:48.08:0,48,886	0/0:13,0:13:33.01:0,33,551	./.	0/1:15,1:16:38.13:207,0,38	0/1:11,1:12:76.54:77,0,126	0/1:13,0:13:68.33:94,0,68	0/1:26,1:27:99:198,0,327	0/1:16,1:17:99:110,0,194	0/0:18,0:16:45.11:0,45,881	0/0:11,0:11:8.87:0,9,269
chr10	31623942	.	TTTTC	T	3394.84	PASS	AB=0.811;AC=19;AF=0.352;AN=54;BaseQRankSum=-2.971;DP=405;FS=2.703;HRun=0;HaplotypeScore=130.0710;InbreedingCoeff=-0.3756;MQ=44.06;MQ0=13;MQRankSum=1.043;QD=12.21;ReadPosRankSum=6.344;VQSLOD=2.7507;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:22,6:27:99:290,0,271	0/0:10,0:10:21.04:0,21,317	0/0:14,0:5:11.85:0,12,128	./.	0/1:17,12:28:99:243,0,132	0/0:12,0:12:33.06:0,33,473	0/0:13,0:12:17.99:0,18,319	0/0:24,0:22:62.92:0,63,913	0/1:14,0:13:42.15:42,0,128	0/1:12,4:15:94.61:236,0,95	0/1:17,6:23:99:153,0,151	0/1:9,3:11:50.06:176,0,50	0/1:5,4:9:42.12:167,0,42	0/1:8,0:8:19.84:20,0,88	0/1:6,0:6:20.81:21,0,40	0/1:8,1:9:47.08:114,0,47	0/1:11,10:21:99:430,0,138	1/1:6,6:11:8.12:179,8,0	0/0:18,0:16:48.05:0,48,707	0/0:13,0:13:29.88:0,30,388	0/0:1,0:1:2.97:0,3,20	0/1:9,6:15:2.76:338,0,3	0/1:9,2:11:85.13:123,0,85	0/1:5,7:12:31.67:243,0,32	0/1:20,7:27:99:411,0,268	0/1:10,7:17:99:180,0,130	0/0:18,0:16:45.10:0,45,738	0/1:8,1:9:29.24:29,0,139
chr10	31623943	.	TTTC	T	2234.06	PASS	AB=0.959;AC=19;AF=0.352;AN=54;BaseQRankSum=-1.321;DP=388;FS=4.096;HRun=0;HaplotypeScore=124.4411;InbreedingCoeff=-0.3564;MQ=42.59;MQ0=13;MQRankSum=-2.280;QD=8.43;ReadPosRankSum=5.966;VQSLOD=2.8432;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:25:99:196,0,190	0/0:10,0:10:20.92:0,21,238	0/0:12,0:4:8.83:0,9,84	./.	0/1:27,1:27:99:183,0,101	0/0:12,0:12:32.84:0,33,363	0/0:13,0:12:15.03:0,15,244	0/0:23,0:21:59.82:0,60,696	0/1:10,4:13:80.47:144,0,80	0/1:16,0:15:90.29:154,0,90	0/1:22,0:22:89.32:89,0,120	0/1:13,0:12:46.82:138,0,47	0/1:9,0:9:32.44:105,0,32	0/1:7,0:7:14.02:14,0,78	0/1:3,3:6:22.30:92,0,22	0/1:7,1:8:32.35:111,0,32	0/1:21,0:21:91.20:246,0,91	1/1:10,0:10:12.02:118,12,0	0/0:18,0:16:47.87:0,48,543	0/0:13,0:13:30.02:0,30,331	0/0:1,0:1:2.97:0,3,20	0/1:14,0:14:1.64:230,0,2	0/1:8,0:8:72.27:76,0,72	0/1:12,0:12:23.01:140,0,23	0/1:26,0:26:99:234,0,220	0/1:16,0:16:99:114,0,115	0/0:18,0:16:45.02:0,45,603	0/1:8,0:8:8.86:9,0,105
chr10	31623944	.	TTC	T	1702.05	PASS	AB=0.964;AC=19;AF=0.352;AN=54;BaseQRankSum=-1.606;DP=382;FS=2.734;HRun=0;HaplotypeScore=119.6810;InbreedingCoeff=-0.2922;MQ=42.43;MQ0=14;MQRankSum=0.504;QD=6.47;ReadPosRankSum=5.659;VQSLOD=2.5261;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:24:99:158,0,117	0/0:10,0:10:12.01:0,12,148	0/0:11,0:3:5.61:0,6,50	./.	0/1:26,2:27:57.42:138,0,57	0/0:11,0:11:24:0,24,248	0/0:12,0:11:15.03:0,15,188	0/0:23,0:21:54.85:0,55,488	0/1:11,2:12:57.14:87,0,57	0/1:15,1:15:66.96:131,0,67	0/1:22,0:22:82.31:82,0,94	0/1:12,1:12:46.56:103,0,47	0/1:8,1:9:22.47:88,0,22	0/1:7,0:7:8.21:8,0,65	0/1:6,0:6:18.25:54,0,18	0/1:8,0:8:9.81:76,0,10	0/1:21,0:21:75.39:194,0,75	1/1:10,0:9:11.97:94,12,0	0/0:17,0:15:35.44:0,35,319	0/0:13,0:13:23.89:0,24,210	0/0:1,0:1:2.97:0,3,20	0/1:11,3:14:1.59:195,0,2	0/1:9,0:8:46.54:59,0,47	0/1:12,0:12:1.29:111,0,1	0/1:26,0:26:99:184,0,186	0/1:16,0:16:82.44:92,0,82	0/0:18,0:16:41.80:0,42,453	0/1:8,0:8:3.29:3,0,86
chr10	31623945	.	T	TC	1043.01	PASS	AB=0.986;AC=19;AF=0.365;AN=52;BaseQRankSum=7.933;DP=373;FS=3.060;HRun=2;HaplotypeScore=123.0290;InbreedingCoeff=-0.2668;MQ=39.30;MQ0=13;MQRankSum=-5.930;QD=3.94;ReadPosRankSum=-2.890;VQSLOD=-0.4724;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:25,1:25:46.52:201,0,47	0/0:9,0:9:12.02:0,12,126	./.	./.	0/1:30,0:29:47.44:59,0,47	0/0:9,0:9:16.02:0,16,89	0/0:10,0:9:3.88:0,4,59	0/0:17,0:15:15.72:0,16,142	0/1:11,2:12:27.92:96,0,28	0/1:16,0:15:47.46:47,0,65	0/1:24,1:25:35.34:120,0,35	0/1:13,0:12:36.85:48,0,37	0/1:9,0:9:3.20:3,0,43	1/1:6,1:7:3.86:67,4,0	0/0:6,0:6:2.90:0,3,27	0/1:8,0:8:6.05:6,0,18	0/1:23,0:23:53.13:104,0,53	0/0:10,0:9:8.88:0,9,29	0/0:15,0:13:13.87:0,14,121	0/1:8,0:8:1.23:1,0,22	0/0:1,0:1:2.98:0,3,21	0/1:15,0:15:4.27:4,0,74	0/1:10,0:9:4.53:5,0,30	0/1:11,0:11:29.99:30,0,35	0/1:28,0:28:58.60:162,0,59	0/1:16,0:16:31.62:90,0,32	0/0:19,0:17:15.59:0,16,148	1/1:7,0:7:13.08:146,13,0
chr10	31624097	.	ATGTGTG	A	1156.43	PASS	AB=0.944;AC=29;AF=0.580;AN=50;BaseQRankSum=-1.103;DP=567;FS=9.287;HRun=0;HaplotypeScore=132.7002;InbreedingCoeff=0.5005;MQ=46.93;MQ0=26;MQRankSum=-0.866;QD=4.02;ReadPosRankSum=2.633;VQSLOD=1.3847;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:26,1:29:30.89:31,0,36	0/0:5,0:5:3.88:0,4,26	./.	./.	1/1:12,4:16:2.89:25,3,0	1/1:16,6:22:11.60:164,12,0	1/1:13,2:19:6.68:69,7,0	0/0:19,0:17:9.03:0,9,162	0/0:20,0:18:2.97:0,3,20	1/1:23,0:22:6:85,6,0	1/1:15,10:24:5.46:73,5,0	1/1:10,4:14:3.48:62,3,0	1/1:8,2:10:9.03:156,9,0	1/1:6,1:7:3.01:40,3,0	0/0:8,0:10:9:0,9,140	1/1:7,3:10:6.02:108,6,0	0/0:20,0:20:2.13:0,2,24	1/1:12,0:11:3.01:46,3,0	0/0:19,0:18:20.09:0,20,506	0/0:5,0:11:14.06:0,14,266	0/0:34,0:50:21.07:0,21,545	1/1:18,5:25:9.91:125,10,0	1/1:15,5:20:5.97:58,6,0	0/1:18,1:18:0:0,0,0	1/1:10,5:17:16.77:187,17,0	0/1:17,0:14:12.26:96,0,12	0/0:12,0:20:24.05:0,24,444	./.
chr10	31624228	.	CTCGCCAGGTTTTCTGTAAAAGCAG	C	17135.44	PASS	AC=34;AF=0.630;AN=54;BaseQRankSum=13.287;DP=416;FS=26.514;HRun=0;HaplotypeScore=334.9661;InbreedingCoeff=0.9397;MQ=90.50;MQ0=0;MQRankSum=-12.937;QD=85.25;ReadPosRankSum=4.968;VQSLOD=3.3548;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:12,8:20:27.08:1461,27,0	0/0:8,0:8:24.07:0,24,2191	0/0:24,0:23:66.10:0,66,4656	0/0:24,0:24:72.25:0,72,4600	1/1:3,4:7:12:604,12,0	0/0:31,0:31:93.32:0,93,9765	0/0:19,0:19:57.16:0,57,5119	0/0:14,0:14:36.12:0,36,2706	1/1:11,6:17:18.06:1177,18,0	1/1:5,5:13:21.07:1088,21,0	1/1:4,8:12:24.08:1306,24,0	1/1:8,10:18:33.09:1919,33,0	1/1:4,7:11:21.07:1366,21,0	1/1:5,4:9:15.05:820,15,0	1/1:5,7:12:18.06:1110,18,0	1/1:10,3:13:18.03:854,18,0	1/1:5,1:6:9.01:191,9,0	1/1:5,0:5:3.01:57,3,0	0/0:21,0:21:60.21:0,60,5638	0/0:17,0:17:51.18:0,51,3840	0/0:38,0:38:99:0,105,10349	1/1:2,10:12:30.10:1964,30,0	1/1:4,5:9:12.04:712,12,0	1/1:11,5:16:11.51:598,12,0	1/1:6,3:9:15.01:668,15,0	1/1:5,7:11:21.07:1239,21,0	0/0:19,0:19:56.97:0,57,5048	./.
chr10	31624257	.	TACTCTTGAC	T	7678.03	PASS	AC=32;AF=0.615;AN=52;BaseQRankSum=13.873;DP=327;FS=24.099;HRun=0;HaplotypeScore=212.9834;InbreedingCoeff=0.9307;MQ=94.54;MQ0=0;MQRankSum=-13.606;QD=78.35;ReadPosRankSum=9.713;VQSLOD=2.5829;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,8:8:24.05:622,24,0	0/0:7,0:7:21.04:0,21,915	0/0:19,0:19:57.20:0,57,2404	0/0:25,0:25:73.49:0,73,3228	1/1:0,3:3:9.03:279,9,0	0/0:36,0:36:99:0,105,5054	0/0:23,0:23:69.24:0,69,3314	0/0:21,0:21:60.20:0,60,2882	1/1:0,6:6:18.06:567,18,0	1/1:0,5:5:15.05:478,15,0	1/1:0,7:8:23.98:490,24,0	1/1:0,10:10:30.10:880,30,0	1/1:0,7:7:21.07:653,21,0	1/1:0,4:4:12.04:359,12,0	1/1:0,7:7:18.06:500,18,0	1/1:1,3:4:12.04:375,12,0	1/1:0,1:1:2.99:24,3,0	./.	0/0:22,0:22:66.23:0,66,2971	0/0:17,0:17:51.16:0,51,2355	0/0:43,0:42:99:0,126,5828	1/1:0,16:16:30.10:946,30,0	1/1:0,4:4:12:305,12,0	1/1:0,5:5:14.97:339,15,0	1/1:0,3:3:9.03:286,9,0	1/1:0,7:6:18.06:575,18,0	0/0:16,0:16:48.16:0,48,2270	./.
chr10	31624325	.	TA	T	1714.48	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.211;DP=701;FS=1.937;HRun=1;HaplotypeScore=142.1044;InbreedingCoeff=0.9970;MQ=83.07;MQ0=0;MQRankSum=-1.475;QD=34.99;ReadPosRankSum=0.355;VQSLOD=3.2880;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:96.33:0,96,1528	0/0:12,0:12:30.10:0,30,476	0/0:37,0:37:99:0,111,1708	0/0:31,0:31:83.80:0,84,1259	0/0:26,0:26:57.19:0,57,906	0/0:28,0:27:84.29:0,84,1342	0/0:24,0:24:69.17:0,69,1045	0/0:30,0:30:90.30:0,90,1417	1/1:0,23:23:57.19:789,57,0	0/0:28,0:28:84.29:0,84,1340	0/0:17,0:17:27.09:0,27,429	0/0:32,0:32:78.22:0,78,1215	0/0:21,0:21:60.20:0,60,958	0/0:17,0:17:51.17:0,51,811	1/1:0,26:26:75.25:1047,75,0	0/0:25,1:26:33.29:0,33,1098	0/0:17,0:17:48.16:0,48,767	0/0:19,0:19:54.18:0,54,854	0/0:22,0:22:66.21:0,66,1012	0/0:26,0:26:75.24:0,75,1173	0/0:42,0:41:99:0,120,1918	0/0:32,0:32:75.26:0,75,1184	0/0:17,0:17:42.12:0,42,622	0/0:30,0:29:81.28:0,81,1292	0/0:22,0:22:60.20:0,60,957	0/0:27,0:27:81.23:0,81,1253	0/0:24,0:23:72.25:0,72,1147	0/0:7,0:7:21.07:0,21,336
chr10	31624775	.	A	AGT	19748.20	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-14.375;DP=802;FS=3.443;HRun=0;HaplotypeScore=89.1954;InbreedingCoeff=0.9985;MQ=57.58;MQ0=4;MQRankSum=1.221;QD=38.05;ReadPosRankSum=8.312;VQSLOD=6.5414;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,38:41:78.27:1380,78,0	0/0:14,0:14:42.14:0,42,577	0/0:36,0:29:47:0,47,868	0/0:35,0:27:50:0,50,819	1/1:10,19:28:27.08:451,27,0	0/0:15,0:15:42.14:0,42,577	0/0:32,0:32:90.27:0,90,1204	0/0:36,0:36:96.75:0,97,1258	1/1:3,20:24:51.17:900,51,0	1/1:13,24:36:81.23:1374,81,0	1/1:2,8:10:18.06:319,18,0	1/1:1,29:30:81.24:1436,81,0	1/1:0,23:23:57.20:1009,57,0	1/1:3,31:33:75.26:1326,75,0	1/1:0,25:25:69.24:1222,69,0	1/1:2,21:23:54.19:956,54,0	1/1:9,28:37:99:1676,99,0	1/1:3,35:36:87.30:1541,87,0	0/0:17,0:16:36.11:0,36,480	0/0:22,0:22:57.16:0,57,743	0/0:50,0:49:99:0,132,1778	1/1:5,23:28:75.26:1286,75,0	1/1:4,19:23:33.11:568,33,0	1/1:2,42:44:96.33:1683,96,0	1/1:1,22:23:51.17:902,51,0	1/1:4,26:28:66.23:1151,66,0	0/0:23,0:23:69.23:0,69,944	1/1:1,15:16:33.11:569,33,0
chr10	31624916	.	GT	G	15687	PASS	AB=0.909;AC=37;AF=0.661;AN=56;BaseQRankSum=12.405;DP=652;FS=3.701;HRun=2;HaplotypeScore=66.2405;InbreedingCoeff=0.9293;MQ=65.90;MQ0=0;MQRankSum=0.346;QD=34.03;ReadPosRankSum=5.131;VQSLOD=5.0606;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,55:56:99:1824,141,0	0/1:9,1:10:8.77:9,0,351	0/0:18,0:18:51.14:0,51,737	0/0:22,0:22:60.17:0,60,814	1/1:0,23:23:60.19:772,60,0	0/0:14,0:14:42.14:0,42,628	0/0:32,0:32:90.28:0,90,1299	0/0:21,0:20:60.13:0,60,854	1/1:0,24:24:72.23:934,72,0	1/1:0,28:28:84.27:1091,84,0	1/1:0,16:16:42.14:540,42,0	1/1:0,30:30:75.24:974,75,0	1/1:1,20:21:63.18:801,63,0	1/1:0,27:27:72.23:929,72,0	1/1:1,17:18:48.16:623,48,0	1/1:0,25:25:72.23:935,72,0	1/1:0,29:29:72.23:934,72,0	1/1:0,16:16:45.15:584,45,0	0/0:21,0:21:63.17:0,63,882	0/0:18,0:18:54.18:0,54,808	0/0:21,0:20:57.17:0,57,815	1/1:1,20:21:57.18:728,57,0	1/1:0,20:20:48.16:623,48,0	1/1:1,29:30:81.09:1051,81,0	1/1:0,23:23:66.21:857,66,0	1/1:0,33:33:96.29:1226,96,0	0/0:24,0:22:69.23:0,69,1031	1/1:1,10:11:21.03:254,21,0
chr10	31625208	.	A	AC	15948.01	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-15.985;DP=689;FS=3.499;HRun=4;HaplotypeScore=63.6962;InbreedingCoeff=0.9997;MQ=86.46;MQ0=0;MQRankSum=-3.952;QD=36.00;ReadPosRankSum=7.341;VQSLOD=4.0660;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:2,40:42:99:1518,111,0	0/0:12,0:12:33.09:0,33,374	0/0:33,0:33:78.19:0,78,859	0/0:18,0:18:36.04:0,36,383	1/1:1,22:23:62.94:861,63,0	0/0:16,0:16:48.14:0,48,544	0/0:27,0:27:63.16:0,63,702	0/0:44,0:44:99:0,117,1296	1/1:0,30:30:81.27:1107,81,0	1/1:1,27:28:81.27:1106,81,0	1/1:0,16:15:48.16:656,48,0	1/1:1,26:27:69.23:944,69,0	1/1:0,29:29:69.23:943,69,0	1/1:1,29:30:75.25:1026,75,0	1/1:2,28:30:66.22:902,66,0	1/1:4,32:36:93.31:1272,93,0	1/1:2,22:24:60.20:821,60,0	1/1:0,22:22:63.21:862,63,0	0/0:18,0:18:51.13:0,51,567	0/0:20,0:20:57.16:0,57,646	0/0:34,0:34:99:0,102,1156	1/1:0,17:17:42.14:574,42,0	1/1:0,13:13:33.11:450,33,0	1/1:2,22:24:63.21:862,63,0	1/1:0,15:15:42.14:574,42,0	1/1:0,27:27:81.27:1100,81,0	0/0:24,0:23:66.19:0,66,747	1/1:0,10:10:27.09:368,27,0
chr10	31625953	.	ATATG	A	10063.93	PASS	AB=0.644;AC=41;AF=0.732;AN=56;BaseQRankSum=12.385;DP=691;FS=4.670;HRun=0;HaplotypeScore=116.9319;InbreedingCoeff=0.8666;MQ=62.39;MQ0=6;MQRankSum=2.928;QD=20.13;ReadPosRankSum=5.088;VQSLOD=4.4828;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:13,16:29:10.07:270,0,10	1/1:3,9:12:18.06:294,18,0	0/0:21,0:13:14.99:0,15,200	0/0:18,0:10:6.02:0,6,99	1/1:9,24:32:44.98:699,45,0	1/1:6,15:21:21.07:343,21,0	1/1:5,14:19:9.03:147,9,0	0/0:36,0:36:57.15:0,57,915	1/1:8,19:27:30.10:489,30,0	1/1:8,26:34:84.26:1289,84,0	1/1:12,20:32:27.09:440,27,0	1/1:9,16:25:24.08:392,24,0	1/1:9,14:23:27.09:440,27,0	1/1:4,20:24:27.09:440,27,0	1/1:4,10:14:27.09:440,27,0	1/1:6,15:21:24.08:392,24,0	1/1:4,18:22:15.05:245,15,0	1/1:7,23:30:42.14:682,42,0	0/0:20,0:19:36:0,36,660	0/0:40,0:40:81.25:0,81,1764	0/0:21,0:21:54.17:0,54,1143	1/1:5,15:20:33.11:538,33,0	1/1:8,16:24:30.10:490,30,0	1/1:5,6:11:9.03:147,9,0	1/1:9,26:35:42.14:685,42,0	1/1:9,21:30:63.18:958,63,0	0/0:35,0:35:63.22:0,63,1517	1/1:3,11:14:15.05:245,15,0
chr10	31627007	.	C	CTTT	6095.61	PASS	AB=1.000;AC=48;AF=0.889;AN=54;BaseQRankSum=0.565;DP=411;FS=10.719;HRun=9;HaplotypeScore=105.6147;InbreedingCoeff=0.4767;MQ=64.40;MQ0=3;MQRankSum=-6.875;QD=16.65;ReadPosRankSum=3.043;VQSLOD=1.7259;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:8,0:8:2.95:143,0,3	1/1:11,2:22:32.92:308,33,0	0/0:16,0:17:36.41:0,36,390	0/0:23,0:23:48.01:0,48,566	1/1:29,0:28:27.45:324,27,0	1/1:8,0:17:26.42:191,26,0	1/1:7,0:15:23.36:167,23,0	1/1:9,6:12:21.05:378,21,0	1/1:10,0:10:7.57:83,8,0	1/1:22,0:21:15.53:230,16,0	1/1:23,0:23:42.94:476,43,0	1/1:9,0:9:16.60:202,17,0	1/1:11,0:10:18.06:247,18,0	1/1:13,0:13:5.20:212,5,0	1/1:13,0:13:19.61:241,20,0	1/1:7,0:7:12.04:159,12,0	1/1:7,0:7:0.68:28,1,0	1/1:7,0:6:12.04:159,12,0	1/1:4,2:6:6.02:110,6,0	1/1:15,11:27:36.65:563,37,0	1/1:2,2:3:3.01:59,3,0	1/1:10,0:10:9.03:119,9,0	1/1:18,0:18:24.03:283,24,0	0/1:7,0:8:12.01:33,0,12	1/1:16,0:15:36.10:460,36,0	1/1:18,0:19:25:294,25,0	1/1:10,11:23:39.06:628,39,0	./.
chr10	31627012	.	T	TTTTTTA	13363.28	PASS	AB=0.869;AC=43;AF=0.796;AN=54;BaseQRankSum=0.603;DP=429;FS=0.502;HRun=0;HaplotypeScore=175.7923;InbreedingCoeff=0.1499;MQ=64.92;MQ0=2;MQRankSum=-7.601;QD=35.26;ReadPosRankSum=2.537;VQSLOD=4.7835;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:3,4:7:26.42:386,0,26	0/1:22,0:22:3.56:287,0,4	0/0:24,0:23:53.32:0,53,794	0/0:24,0:24:42.69:0,43,919	1/1:15,13:32:54.97:1181,55,0	0/1:18,0:18:56.37:80,0,56	0/1:17,0:14:37.37:65,0,37	1/1:12,0:9:16.25:100,16,0	1/1:4,3:9:5.82:240,6,0	1/1:11,10:27:57.05:1284,57,0	1/1:9,13:29:65.72:1561,66,0	1/1:1,5:7:18.05:526,18,0	1/1:4,5:11:24.08:699,24,0	0/1:5,5:18:16.24:624,0,16	1/1:6,5:12:30.02:740,30,0	1/1:0,5:6:12.04:402,12,0	1/1:1,3:7:3.01:51,3,0	1/1:2,3:7:12.04:362,12,0	0/1:6,0:6:33.52:101,0,34	1/1:25,0:24:53.62:532,54,0	1/1:3,0:3:2.80:13,3,0	1/1:7,3:12:18.06:431,18,0	1/1:14,3:17:35.98:693,36,0	0/1:7,1:8:32.03:131,0,32	1/1:2,14:16:39.13:1220,39,0	1/1:9,8:21:51.15:1246,51,0	1/1:25,0:25:5.78:409,6,0	./.
chr10	31627163	.	A	AG	15754.86	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=10.671;DP=484;FS=19.717;HRun=0;HaplotypeScore=166.6670;InbreedingCoeff=0.9632;MQ=80.75;MQ0=0;MQRankSum=-11.065;QD=36.30;ReadPosRankSum=7.733;VQSLOD=2.3157;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:0,32:32:78.13:1108,78,0	1/1:0,7:7:15.05:211,15,0	0/0:22,0:22:63.16:0,63,790	0/0:28,0:28:74.72:0,75,950	1/1:0,16:15:39.13:545,39,0	1/1:0,13:13:39.13:550,39,0	1/1:0,19:18:45.01:589,45,0	1/1:0,23:22:66.22:945,66,0	1/1:0,26:26:69.23:985,69,0	1/1:0,16:15:39.09:520,39,0	1/1:0,10:10:18.06:254,18,0	1/1:1,20:21:57.17:791,57,0	1/1:1,7:8:24.07:324,24,0	1/1:0,23:23:69.18:953,69,0	1/1:0,18:18:42.14:592,42,0	1/1:0,14:14:36.12:507,36,0	1/1:0,25:25:54.18:752,54,0	1/1:0,20:20:60.20:849,60,0	1/1:1,14:14:39.13:560,39,0	1/1:0,12:12:30.10:423,30,0	1/1:0,17:17:38.74:545,39,0	1/1:0,10:10:15.05:212,15,0	1/1:0,14:14:33.11:464,33,0	1/1:0,18:18:51.17:720,51,0	1/1:0,19:18:54.18:764,54,0	1/1:1,18:19:54.18:775,54,0	1/1:0,15:15:45.15:646,45,0	1/1:0,4:4:12.04:169,12,0
chr10	31627482	.	GTGCTGT	G	4469.52	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=13.065;DP=593;FS=5.361;HRun=0;HaplotypeScore=146.4703;InbreedingCoeff=0.9641;MQ=70.89;MQ0=0;MQRankSum=-12.257;QD=35.19;ReadPosRankSum=1.112;VQSLOD=4.6342;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:99:0,99,3525	1/1:0,12:7:18.06:443,18,0	0/0:18,0:18:51.09:0,51,1395	0/0:27,0:27:74.79:0,75,2091	0/0:20,0:20:48.16:0,48,1581	1/1:3,17:15:36.12:885,36,0	1/1:4,17:19:51.17:1217,51,0	1/1:8,9:13:18.06:359,18,0	0/0:25,0:25:72.23:0,72,2275	0/0:21,0:21:54.18:0,54,1708	0/0:24,0:24:60.21:0,60,1982	0/0:18,0:18:54.19:0,54,1656	0/0:33,0:33:99:0,99,3338	0/0:17,0:17:51.18:0,51,1651	0/0:25,0:25:75.26:0,75,2638	0/0:26,0:26:78.27:0,78,2744	0/0:36,0:36:99:0,105,3471	0/0:12,0:12:36.12:0,36,1190	1/1:3,1:3:3.01:34,3,0	1/1:8,8:12:21.07:482,21,0	1/1:6,2:8:15.05:224,15,0	0/0:26,0:26:72.25:0,72,2400	0/0:24,0:24:69.24:0,69,2434	0/0:12,0:12:33.11:0,33,1099	0/0:25,0:25:69.24:0,69,2359	0/0:29,0:29:84.29:0,84,2920	1/1:8,21:17:36.12:826,36,0	0/0:15,0:15:45.12:0,45,1476
chr10	31627487	.	GT	G	717.85	PASS	AB=0.667;AC=15;AF=0.268;AN=56;BaseQRankSum=13.115;DP=571;FS=1.594;HRun=5;HaplotypeScore=105.5542;InbreedingCoeff=0.8828;MQ=70.81;MQ0=0;MQRankSum=-12.117;QD=6.47;ReadPosRankSum=-0.424;VQSLOD=-0.1848;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,99,1354	1/1:12,0:7:15.74:62,16,0	0/0:18,0:17:45.11:0,45,552	0/0:25,0:25:57.29:0,57,712	0/0:20,0:20:45.15:0,45,615	1/1:17,0:14:31.58:124,32,0	1/1:20,0:20:30.17:177,30,0	1/1:12,3:11:23.54:193,24,0	0/0:22,0:22:66.17:0,66,866	0/0:18,0:18:48.16:0,48,653	0/0:24,0:24:51.17:0,51,697	0/0:15,0:15:45.15:0,45,615	0/0:30,0:30:84.28:0,84,1147	0/0:17,0:17:48.16:0,48,657	0/0:25,0:25:69.23:0,69,944	0/0:29,0:29:78.26:0,78,1067	0/0:36,0:36:93.31:0,93,1268	0/0:12,0:12:33.11:0,33,451	1/1:1,1:2:3.01:34,3,0	1/1:11,0:10:18.77:82,19,0	0/1:3,3:6:9.18:59,0,9	0/0:28,0:28:75.24:0,75,1012	0/0:24,0:24:66.22:0,66,902	0/0:12,0:12:33.10:0,33,436	0/0:25,0:25:69.23:0,69,943	0/0:30,0:30:90.28:0,90,1203	1/1:24,4:17:35.07:181,35,0	0/0:16,0:16:48.11:0,48,605
chr10	31627493	.	GC	G	457.49	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=13.385;DP=566;FS=2.213;HRun=1;HaplotypeScore=106.5263;InbreedingCoeff=0.9256;MQ=69.79;MQ0=1;MQRankSum=-12.086;QD=4.12;ReadPosRankSum=1.030;VQSLOD=0.5037;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,102,1596	1/1:0,12:7:15.06:57,15,0	0/0:17,0:15:41.68:0,42,583	0/0:24,0:23:59.60:0,60,787	0/0:18,0:18:51.17:0,51,791	1/1:0,17:14:28.97:103,29,0	1/1:0,18:21:46.97:182,47,0	1/1:3,9:11:12.31:65,12,0	0/0:23,0:23:69.22:0,69,1074	0/0:18,0:18:54.12:0,54,778	0/0:24,0:24:72.23:0,72,1059	0/0:17,0:17:51.14:0,51,762	0/0:29,0:29:87.30:0,87,1379	0/0:18,0:18:54.15:0,54,808	0/0:23,0:23:69.22:0,69,1074	0/0:27,0:27:81.28:0,81,1277	0/0:33,0:33:99:0,99,1564	0/0:12,0:12:33.06:0,33,473	0/0:1,1:2:2.04:0,2,6	1/1:0,8:10:21.03:84,21,0	1/1:3,2:6:1.66:6,2,0	0/0:28,0:28:83.28:0,83,1214	0/0:23,0:23:69.22:0,69,1061	0/0:12,0:12:33.10:0,33,501	0/0:27,0:27:81.21:0,81,1162	0/0:30,0:30:90.30:0,90,1414	1/1:4,22:18:35.07:147,35,0	0/0:16,0:16:48.16:0,48,762
chr10	31627500	.	C	CG	1530.68	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=14.076;DP=575;FS=1.425;HRun=1;HaplotypeScore=103.8307;InbreedingCoeff=0.9625;MQ=62.85;MQ0=1;MQRankSum=-11.579;QD=11.87;ReadPosRankSum=-0.344;VQSLOD=1.8162;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,102,1425	1/1:0,12:7:17.48:99,17,0	0/0:15,0:13:32.15:0,32,459	0/0:19,0:18:50.76:0,51,623	0/0:21,0:21:60.12:0,60,780	1/1:1,18:16:36.73:227,37,0	1/1:0,22:22:63.66:373,64,0	1/1:3,14:13:15.73:201,16,0	0/0:22,0:22:66.22:0,66,922	0/0:17,0:17:51.08:0,51,684	0/0:25,0:25:72.24:0,72,1002	0/0:16,0:16:48.15:0,48,654	0/0:33,0:33:99:0,99,1351	0/0:16,0:16:48.16:0,48,671	0/0:24,0:24:69.20:0,69,912	0/0:30,0:30:87.25:0,87,1164	0/0:34,0:34:99:0,102,1390	0/0:10,0:10:30.10:0,30,415	1/1:1,3:2:3.01:46,3,0	1/1:1,17:17:34.92:270,35,0	1/1:6,3:9:13.64:116,14,0	0/0:24,0:24:72.24:0,72,1005	0/0:23,0:23:66.22:0,66,920	0/0:11,0:11:30.10:0,30,419	0/0:26,0:26:78.25:0,78,1060	0/0:30,0:30:90.24:0,90,1206	1/1:0,28:20:50.12:398,50,0	0/0:16,0:16:48.16:0,48,670
chr10	31627745	.	AC	A	3966.32	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=-9.595;DP=576;FS=26.021;HRun=1;HaplotypeScore=136.5416;InbreedingCoeff=0.4286;MQ=56.54;MQ0=4;MQRankSum=6.657;QD=14.69;ReadPosRankSum=-3.696;VQSLOD=1.2361;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:16,0:16:6.04:7,0,6	0/0:19,0:18:11.45:0,11,121	0/0:29,1:24:51.99:0,52,730	0/0:24,0:16:45.10:0,45,588	0/1:23,0:23:49.16:49,0,72	0/0:25,0:25:58.02:0,58,362	0/0:23,0:24:19.72:0,20,252	1/1:1,21:21:60.11:742,60,0	0/0:22,0:22:22.71:0,23,94	0/1:31,0:31:15.90:16,0,115	0/1:17,0:17:13.22:13,0,72	0/0:18,0:18:17.73:0,18,88	0/0:17,0:17:10.55:0,11,37	0/0:16,0:16:8.30:0,8,22	0/0:17,0:17:14.19:0,14,47	0/0:15,0:15:14.27:0,14,38	0/0:24,0:24:25.87:0,26,126	0/0:15,0:15:8.97:0,9,43	1/1:2,11:11:33.10:442,33,0	1/1:0,27:26:78.08:1038,78,0	1/1:1,13:14:28.39:508,28,0	0/1:29,0:29:56.74:57,0,66	0/1:24,0:24:0.16:0,0,54	0/0:15,0:15:13.70:0,14,68	0/0:19,0:19:11.41:0,11,30	0/1:19,0:19:28.49:28,0,77	1/1:0,35:35:77.62:1067,78,0	0/0:6,0:6:11.08:0,11,45
chr10	31627746	.	C	CA	1696.26	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=-10.981;DP=580;FS=5.310;HRun=6;HaplotypeScore=145.3905;InbreedingCoeff=0.5887;MQ=57.47;MQ0=4;MQRankSum=3.737;QD=12.12;ReadPosRankSum=-5.773;VQSLOD=0.3179;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:10.55:0,11,31	1/1:3,16:18:27.09:338,27,0	0/0:29,0:23:34.67:0,35,468	0/0:25,0:17:29.30:0,29,345	0/0:23,0:23:36.49:0,36,146	1/1:3,22:25:60.19:754,60,0	1/1:4,22:26:57.17:702,57,0	0/1:22,0:21:3.14:33,0,3	0/0:23,0:23:20.37:0,20,59	0/0:31,0:31:53.87:0,54,217	0/0:17,0:17:24.77:0,25,73	0/0:19,0:19:10.18:0,10,29	0/0:17,0:17:10.18:0,10,30	0/0:16,0:16:12.22:0,12,36	0/0:16,0:16:14.26:0,14,41	0/0:15,0:15:16.30:0,16,47	0/0:23,0:23:12.22:0,12,35	0/0:14,0:14:6.91:0,7,27	0/1:13,0:11:6.04:6,0,6	0/0:29,0:28:9.88:0,10,57	0/0:14,0:14:7.95:0,8,29	0/0:29,0:29:42.48:0,42,151	0/0:25,0:25:31.21:0,31,92	0/0:14,0:14:6.44:0,6,20	0/0:19,0:19:14.26:0,14,41	0/0:20,0:20:30.96:0,31,145	0/1:35,0:35:15.73:16,0,32	0/0:6,0:6:8.15:0,8,25
chr10	31627747	.	AAAAAAC	A	10232.46	PASS	AB=0.769;AC=36;AF=0.643;AN=56;BaseQRankSum=9.734;DP=580;FS=7.902;HRun=0;HaplotypeScore=154.3236;InbreedingCoeff=0.6198;MQ=57.21;MQ0=4;MQRankSum=-6.387;QD=26.10;ReadPosRankSum=4.129;VQSLOD=3.8694;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:1,15:16:32.26:303,0,32	0/0:19,0:18:26.49:0,26,479	0/0:33,0:23:42.59:0,43,1122	0/0:25,0:17:34.88:0,35,709	1/1:1,21:22:59.32:835,59,0	0/0:25,0:25:59.27:0,59,1321	0/0:24,0:24:55.86:0,56,960	0/1:22,0:21:16.33:16,0,738	1/1:2,21:23:30.10:678,30,0	1/1:0,31:31:86.46:1194,86,0	1/1:2,15:17:39.12:738,39,0	1/1:2,16:18:15.05:339,15,0	1/1:1,16:17:15.05:339,15,0	1/1:0,16:16:18.06:406,18,0	1/1:1,15:16:21.07:475,21,0	1/1:0,15:15:24.08:543,24,0	1/1:4,19:23:18.06:407,18,0	0/1:3,11:14:48.43:126,0,48	0/0:13,0:11:3.34:0,3,431	0/1:29,0:28:1.65:2,0,1297	0/0:14,0:14:5.27:0,5,551	1/1:1,28:29:65.95:1115,66,0	1/1:1,24:25:44.34:995,44,0	1/1:3,11:14:9.03:201,9,0	1/1:0,19:19:21.07:474,21,0	1/1:1,19:20:54:776,54,0	0/0:35,0:35:0.79:0,1,1257	1/1:1,5:6:12.04:270,12,0
chr10	31627866	.	AACAGACAGACAGACAGACAG	A	18700.54	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=13.295;DP=560;FS=0.892;HRun=0;HaplotypeScore=281.0058;InbreedingCoeff=0.9275;MQ=61.69;MQ0=6;MQRankSum=-11.121;QD=62.75;ReadPosRankSum=4.677;VQSLOD=3.6893;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,12:18:18.06:847,18,0	0/0:6,0:11:24.08:0,24,1764	0/0:19,0:16:24.08:0,24,1512	0/0:16,0:11:21.07:0,21,987	1/1:9,22:31:56.98:2117,57,0	0/0:14,0:26:51.14:0,51,3641	0/0:14,0:23:51.16:0,51,3601	0/0:10,0:17:39.13:0,39,2123	1/1:5,14:19:27.09:1455,27,0	1/1:3,9:12:21.03:990,21,0	1/1:4,13:17:27.09:1333,27,0	1/1:3,10:13:15.05:808,15,0	1/1:6,13:19:27.09:1455,27,0	1/1:5,8:13:18.06:970,18,0	1/1:2,14:16:24.08:1293,24,0	1/1:5,8:13:12.04:647,12,0	1/1:9,11:20:15.01:667,15,0	1/1:4,4:8:6.02:312,6,0	0/0:15,0:24:48.15:0,48,2473	0/0:14,0:37:72.23:0,72,4115	0/0:14,0:43:78.24:0,78,4193	1/1:7,16:23:32.98:1353,33,0	1/1:2,10:12:18.06:954,18,0	1/1:5,10:15:2.71:161,3,0	1/1:10,14:24:27.09:1455,27,0	1/1:5,15:20:42.04:1559,42,0	0/0:12,0:37:84.29:0,84,4952	1/1:0,5:5:6.02:323,6,0
chr10	31629927	.	T	TTTTATTTATTTA	35401.59	PASS	AB=0.842;AC=41;AF=0.732;AN=56;BaseQRankSum=13.708;DP=652;FS=4.237;HRun=0;HaplotypeScore=326.9522;InbreedingCoeff=0.1790;MQ=62.98;MQ0=2;MQRankSum=-13.588;QD=60.93;ReadPosRankSum=-2.344;VQSLOD=3.2649;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,6:15:42.14:1530,42,0	0/1:8,0:17:99:183,0,264	0/0:21,0:19:48.04:0,48,1057	0/0:19,0:18:38.20:0,38,911	1/1:28,6:35:87.18:2852,87,0	0/1:24,0:33:99:806,0,966	0/1:29,0:29:99:386,0,1211	0/1:38,0:38:99:270,0,1606	0/1:15,0:24:99:1466,0,393	1/1:34,1:35:91.21:2773,91,0	1/1:22,5:27:78.10:2739,78,0	1/1:15,5:20:59.99:2088,60,0	1/1:18,4:22:63.20:2218,63,0	1/1:14,1:15:39.13:1317,39,0	0/0:14,0:31:72.24:0,72,1296	1/1:19,3:23:69:2225,69,0	1/1:11,1:12:36.08:957,36,0	1/1:10,0:10:27.02:659,27,0	0/1:27,0:26:99:354,0,1163	0/1:16,0:23:99:1094,0,646	0/1:12,0:15:99:108,0,412	1/1:19,3:22:60.19:1805,60,0	1/1:18,6:24:66.03:2092,66,0	1/1:6,2:8:21.07:737,21,0	1/1:25,4:29:84.27:2737,84,0	1/1:30,3:33:95.52:2840,96,0	0/1:30,0:38:99:697,0,1432	1/1:6,0:6:18.06:470,18,0
chr10	31629946	.	C	CTGTT	11718.65	PASS	AB=0.728;AC=17;AF=0.304;AN=56;BaseQRankSum=16.499;DP=655;FS=8.314;HRun=0;HaplotypeScore=290.1280;InbreedingCoeff=-0.4360;MQ=44.19;MQ0=7;MQRankSum=-11.869;QD=32.28;ReadPosRankSum=3.911;VQSLOD=3.7533;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:10,6:17:99:426,0,195	0/1:14,1:15:26.51:27,0,271	0/0:13,0:11:26.12:0,26,507	0/0:17,0:15:27.78:0,28,733	0/1:24,14:38:99:991,0,431	0/0:33,0:33:74.74:0,75,1403	0/0:30,0:30:87.07:0,87,1520	0/0:35,0:34:99:0,99,1850	0/0:26,0:26:57.06:0,57,979	0/1:24,11:35:99:1087,0,526	0/1:16,14:30:99:1195,0,367	0/1:10,14:24:99:974,0,206	0/1:11,12:23:99:1013,0,235	0/1:9,8:17:99:371,0,278	0/0:34,0:34:73.15:0,73,1088	0/1:10,10:20:99:710,0,294	0/1:7,7:14:89.65:300,0,90	0/1:7,3:10:99:344,0,212	0/0:29,0:25:75.01:0,75,1344	0/0:24,0:23:57.53:0,58,956	0/0:17,0:17:30.79:0,31,598	0/1:11,6:17:99:576,0,291	0/1:13,11:24:99:813,0,371	0/1:5,3:8:99:150,0,116	0/1:15,15:30:99:1482,0,247	0/1:23,11:34:99:1191,0,529	0/0:34,0:34:81.73:0,82,1434	0/1:6,1:6:68.62:69,0,223
chr10	31629958	.	C	CTGTT	8619.80	PASS	AB=0.832;AC=19;AF=0.339;AN=56;BaseQRankSum=11.932;DP=636;FS=2.256;HRun=0;HaplotypeScore=314.3159;InbreedingCoeff=-0.0582;MQ=55.03;MQ0=7;MQRankSum=-12.759;QD=25.73;ReadPosRankSum=6.870;VQSLOD=4.1735;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:12,3:15:22.89:472,0,23	0/0:17,0:17:35.41:0,35,483	0/0:18,0:17:37.68:0,38,712	0/0:16,0:17:44.14:0,44,790	0/1:26,8:34:99:805,0,165	0/0:33,0:33:80.29:0,80,1510	0/0:23,0:23:63.01:0,63,1063	0/0:41,0:40:99:0,120,2323	0/0:23,0:23:48.67:0,49,801	0/1:25,9:34:99:950,0,122	0/1:20,8:28:18.82:729,0,19	0/1:22,3:25:77.33:548,0,77	0/1:17,4:21:48.16:602,0,48	0/1:14,3:17:56.49:373,0,56	0/0:30,0:30:60.77:0,61,752	1/1:16,4:20:21.99:574,22,0	0/1:15,1:16:27.37:226,0,27	0/1:9,2:11:58.43:135,0,58	0/0:27,0:23:68.70:0,69,1200	0/0:27,0:26:63.61:0,64,1041	0/0:12,0:12:26.73:0,27,471	1/1:9,6:15:22.34:634,22,0	0/1:17,4:21:43.02:511,0,43	0/1:6,2:8:13.65:244,0,14	0/1:26,7:33:87.38:783,0,87	0/1:24,10:34:99:972,0,164	0/0:32,0:32:81.25:0,81,1480	1/1:3,0:2:4.57:62,5,0
chr10	31630064	.	T	TGAC	23925.18	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=0.603;DP=698;FS=0.000;HRun=0;HaplotypeScore=150.1562;InbreedingCoeff=0.9886;MQ=76.90;MQ0=4;MQRankSum=-11.092;QD=58.21;ReadPosRankSum=2.993;VQSLOD=6.3550;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,26:31:71.92:1638,72,0	0/0:11,0:11:33.11:0,33,582	0/0:31,0:31:93.30:0,93,1568	0/0:24,0:24:72.24:0,72,1227	1/1:3,31:34:84.17:1982,84,0	0/0:22,0:22:63.22:0,63,1111	0/0:21,0:21:63.22:0,63,1111	0/0:24,0:24:63.17:0,63,1078	0/0:29,0:29:87.30:0,87,1524	1/1:10,20:33:93.24:2018,93,0	1/1:3,16:20:48.16:1131,48,0	1/1:5,18:24:57.20:1309,57,0	1/1:6,22:27:66.23:1554,66,0	1/1:2,17:19:48.16:1119,48,0	0/0:30,0:30:81.28:0,81,1427	1/1:5,17:22:7.32:1288,7,0	1/1:1,21:24:66.23:1544,66,0	1/1:2,13:16:39.13:904,39,0	0/0:19,0:19:57.15:0,57,947	0/0:18,0:18:51.17:0,51,900	0/0:34,0:34:93.30:0,93,1604	1/1:4,26:33:78:1835,78,0	1/1:2,23:25:66.23:1544,66,0	1/1:1,16:17:39.13:920,39,0	1/1:6,27:35:84.29:1980,84,0	1/1:6,23:29:84.25:1890,84,0	0/0:24,0:24:72.23:0,72,1239	1/1:1,17:18:54.19:1270,54,0
chr10	31630382	.	A	AT	7530.69	PASS	AB=1.000;AC=37;AF=0.661;AN=56;BaseQRankSum=-7.685;DP=501;FS=3.930;HRun=10;HaplotypeScore=49.4532;InbreedingCoeff=0.9066;MQ=71.29;MQ0=0;MQRankSum=-2.829;QD=21.52;ReadPosRankSum=2.800;VQSLOD=5.8470;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,24:30:25.91:686,26,0	0/0:7,0:7:17.97:0,18,148	0/1:13,0:14:9.94:10,0,135	0/0:6,0:6:11.97:0,12,97	1/1:5,20:25:60.15:640,60,0	0/0:21,0:21:59.92:0,60,490	0/0:10,0:11:29.01:0,29,228	0/0:32,0:33:73.86:0,74,592	1/1:4,0:13:22.73:114,23,0	1/1:7,22:29:44.47:659,44,0	1/1:8,12:20:14.47:359,14,0	1/1:1,4:5:12.03:128,12,0	1/1:5,13:18:39.08:407,39,0	1/1:0,10:10:21.05:224,21,0	1/1:3,0:16:31.32:157,31,0	1/1:2,12:14:14.45:359,14,0	1/1:2,13:15:39.10:416,39,0	1/1:4,12:16:33.08:352,33,0	0/0:21,0:21:39.80:0,40,320	0/0:17,0:17:44.95:0,45,369	0/0:15,0:15:41.95:0,42,345	1/1:4,20:25:62.97:645,63,0	1/1:6,19:25:16.83:575,17,0	1/1:0,10:12:32.75:316,33,0	1/1:3,23:28:65.83:668,66,0	1/1:6,20:26:16.89:591,17,0	0/0:20,0:19:56.93:0,57,468	1/1:1,8:9:21.05:224,21,0
chr10	31630826	.	A	AAC	3751.27	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=6.658;DP=452;FS=4.654;HRun=0;HaplotypeScore=98.5179;InbreedingCoeff=0.8570;MQ=64.38;MQ0=6;MQRankSum=-2.029;QD=18.85;ReadPosRankSum=2.506;VQSLOD=3.5415;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:10,25:35:33.11:538,33,0	0/0:8,0:8:21.07:0,21,259	0/0:23,0:16:30.08:0,30,353	0/0:28,0:21:37.49:0,37,410	1/1:4,4:9:9.02:123,9,0	0/0:33,0:33:75.23:0,75,923	0/0:20,0:20:45.11:0,45,529	0/0:42,0:42:72.17:0,72,832	0/0:18,0:18:24.06:0,24,282	1/1:5,3:8:15.02:206,15,0	1/1:8,7:14:12.04:170,12,0	1/1:4,5:9:15.02:217,15,0	1/1:3,1:4:5.95:67,6,0	1/1:6,6:12:11.80:181,12,0	0/0:14,0:14:11.70:0,12,179	1/1:2,4:6:5.38:57,5,0	1/1:8,13:22:17.60:530,18,0	1/1:6,11:17:5.60:367,6,0	0/0:16,0:15:30.03:0,30,329	0/0:10,0:10:24.08:0,24,295	0/0:17,0:17:39.12:0,39,480	1/1:4,0:4:3.01:43,3,0	1/1:5,2:7:14.97:209,15,0	1/1:10,5:14:6.07:192,6,0	1/1:5,12:16:12.04:196,12,0	1/1:4,12:16:42.11:638,42,0	0/0:21,0:24:59.67:0,60,657	1/1:3,0:3:2.97:20,3,0
chr10	31630842	.	G	GAC	290.40	PASS	AB=0.934;AC=19;AF=0.352;AN=54;BaseQRankSum=8.157;DP=430;FS=2.639;HRun=0;HaplotypeScore=112.5144;InbreedingCoeff=0.6232;MQ=53.77;MQ0=11;MQRankSum=-5.820;QD=2.05;ReadPosRankSum=-0.827;VQSLOD=1.5990;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:29,1:30:6.17:13,6,0	0/0:8,0:8:24.08:0,24,329	0/0:18,0:10:15.04:0,15,186	0/0:25,0:14:29.93:0,30,388	0/1:10,0:9:0:0,0,0	0/0:32,0:32:87.29:0,87,1191	0/0:16,0:16:45.15:0,45,608	0/0:34,0:34:89.93:0,90,1189	0/0:18,0:18:18.93:0,19,227	0/0:6,0:6:13.52:0,14,77	0/0:13,0:12:0.94:0,1,2	1/1:10,0:10:8.61:57,9,0	1/1:4,0:4:3.06:8,3,0	0/0:12,0:12:1.43:0,1,9	0/0:11,1:12:12.46:0,12,166	1/1:5,0:5:1.79:7,2,0	1/1:21,1:22:22.68:170,23,0	1/1:15,0:15:4.48:39,4,0	0/0:17,0:13:33.10:0,33,440	0/0:16,0:15:44.15:0,44,561	0/0:17,0:16:42.12:0,42,557	./.	0/1:10,2:12:0.32:1,0,0	1/1:14,0:13:6.19:30,6,0	0/0:18,0:17:1.11:0,1,2	0/1:16,1:17:39.11:81,0,39	0/0:22,0:22:60.18:0,60,799	1/1:0,1:3:3.01:42,3,0
chr10	31630848	.	G	GAC	377.89	PASS	AB=0.876;AC=25;AF=0.481;AN=52;BaseQRankSum=9.179;DP=426;FS=18.053;HRun=0;HaplotypeScore=114.6518;InbreedingCoeff=0.5626;MQ=51.53;MQ0=14;MQRankSum=-3.835;QD=2.08;ReadPosRankSum=-1.103;VQSLOD=0.9046;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:30:7.22:52,7,0	0/0:8,0:8:24.08:0,24,319	0/0:16,0:7:16.10:0,16,146	0/0:28,0:15:27.01:0,27,298	./.	0/0:32,0:31:84.25:0,84,1086	0/0:17,0:17:45.13:0,45,584	0/0:36,0:36:93.23:0,93,1184	0/1:13,3:16:0.97:1,0,118	0/0:9,0:9:3.36:0,3,16	1/1:8,1:9:3:25,3,0	1/1:11,0:11:9.64:82,10,0	1/1:5,0:5:3.17:8,3,0	0/0:10,0:10:3.56:0,4,13	0/1:8,3:11:39.74:40,0,136	1/1:4,0:4:2.37:8,2,0	1/1:20,0:21:11.55:99,12,0	1/1:13,0:14:7.10:48,7,0	0/0:17,0:13:36.08:0,36,443	0/0:17,0:16:48.15:0,48,627	0/0:19,0:17:42.10:0,42,513	./.	1/1:12,0:12:5.83:49,6,0	1/1:13,0:12:0.46:1,0,0	1/1:18,0:16:5.98:49,6,0	0/1:14,0:14:6.95:45,0,7	0/0:20,0:20:57.02:0,57,732	1/1:3,0:3:3.01:42,3,0
chr10	31630852	.	CACAG	C	757.93	PASS	AB=1.000;AC=22;AF=0.423;AN=52;BaseQRankSum=9.696;DP=423;FS=1.245;HRun=0;HaplotypeScore=122.1540;InbreedingCoeff=0.3223;MQ=51.01;MQ0=14;MQRankSum=-1.374;QD=3.87;ReadPosRankSum=-2.380;VQSLOD=1.3386;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:29,3:30:20.43:167,20,0	0/0:8,0:8:24.08:0,24,639	0/0:16,0:7:16.09:0,16,232	0/0:29,0:18:35.80:0,36,554	./.	0/0:31,0:30:84.24:0,84,2004	0/0:19,0:19:54.17:0,54,1275	0/0:38,0:38:81.33:0,81,2078	0/1:14,0:14:21.60:22,0,223	0/1:10,0:10:34.68:54,0,35	0/1:10,0:9:0.94:20,0,1	1/1:11,0:11:14.56:91,15,0	0/1:5,0:5:6.32:40,0,6	1/1:10,0:10:5.30:25,5,0	0/1:11,0:11:42.43:42,0,185	0/1:4,0:4:12.04:19,0,12	1/1:20,0:20:8.96:102,9,0	0/1:14,0:14:37.85:124,0,38	0/0:16,0:13:39.10:0,39,813	0/0:17,0:16:48.08:0,48,1178	0/0:18,0:15:42.12:0,42,972	./.	1/1:9,2:11:5.99:49,6,0	1/1:11,0:11:2.71:18,3,0	1/1:18,1:17:14.89:111,15,0	0/1:13,0:13:50.96:51,0,51	0/0:19,0:19:57.20:0,57,1450	0/0:3,0:3:2.99:0,3,23
chr10	31630854	.	CAG	C	1121.65	PASS	AB=0.915;AC=26;AF=0.500;AN=52;BaseQRankSum=10.829;DP=419;FS=1.114;HRun=0;HaplotypeScore=108.4721;InbreedingCoeff=0.5979;MQ=47.67;MQ0=13;MQRankSum=-2.981;QD=5.93;ReadPosRankSum=-1.433;VQSLOD=2.8735;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:28,2:28:28.07:220,28,0	0/0:8,0:8:24.08:0,24,463	0/0:17,1:9:21.49:0,21,250	0/0:29,0:17:44.38:0,44,557	./.	0/0:31,0:30:84.23:0,84,1465	0/0:19,0:19:54.16:0,54,965	0/0:37,0:37:81.31:0,81,1627	0/1:15,0:15:22.02:22,0,167	0/1:9,1:10:8.57:68,0,9	1/1:9,1:9:2.05:44,2,0	1/1:10,0:10:14.61:92,15,0	1/1:5,0:5:9.74:56,10,0	1/1:7,0:7:5.80:32,6,0	0/1:11,0:11:12.23:12,0,149	0/1:2,1:3:4.66:19,0,5	1/1:18,1:19:29.84:204,30,0	1/1:12,2:14:18.78:199,19,0	0/0:19,0:16:47.80:0,48,644	0/0:17,0:16:48.15:0,48,879	0/0:19,0:15:42.12:0,42,743	./.	1/1:11,0:11:5.99:49,6,0	1/1:12,0:11:2.93:18,3,0	1/1:19,0:17:17.91:138,18,0	1/1:12,1:13:12.94:139,13,0	0/0:19,0:19:57.18:0,57,1046	0/0:3,0:3:1.25:0,1,3
chr10	31630862	.	CAG	C	819.80	PASS	AB=0.939;AC=25;AF=0.463;AN=54;BaseQRankSum=9.948;DP=400;FS=2.736;HRun=0;HaplotypeScore=108.7588;InbreedingCoeff=0.4939;MQ=46.84;MQ0=12;MQRankSum=-3.105;QD=4.38;ReadPosRankSum=-1.514;VQSLOD=2.6647;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:25,2:25:16.09:121,16,0	0/0:9,0:9:27.05:0,27,422	0/0:14,0:6:17.78:0,18,255	0/0:27,0:15:31.96:0,32,497	1/1:8,0:7:2.99:24,3,0	0/0:29,0:28:65.97:0,66,1223	0/0:19,0:19:54.09:0,54,794	0/0:36,0:36:62.14:0,62,1271	0/1:16,0:16:29.52:30,0,74	0/1:8,1:9:26.97:66,0,27	1/1:10,1:10:2.05:42,2,0	1/1:10,0:10:14.59:93,15,0	1/1:5,0:5:9.72:54,10,0	1/1:6,0:6:5.87:39,6,0	0/1:11,0:11:15.28:15,0,54	0/1:3,1:4:1.66:41,0,2	1/1:17,1:18:25.32:173,25,0	0/1:12,2:14:7.86:125,0,8	0/0:18,0:14:42.12:0,42,696	0/0:17,0:16:45.14:0,45,830	0/0:19,0:15:42.03:0,42,635	./.	0/1:10,0:10:0:0,0,0	0/1:11,0:11:0.01:0,0,0	1/1:16,0:15:11.91:88,12,0	1/1:10,1:11:6.27:86,6,0	0/0:19,0:19:54.11:0,54,889	0/0:1,0:1:1.25:0,1,3
chr10	31630886	.	CAGAG	C	1986	PASS	AB=1.000;AC=30;AF=0.556;AN=54;BaseQRankSum=9.527;DP=376;FS=43.446;HRun=0;HaplotypeScore=105.5678;InbreedingCoeff=0.7721;MQ=56.15;MQ0=6;MQRankSum=-3.977;QD=11.96;ReadPosRankSum=1.137;VQSLOD=1.2858;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:16:10.34:101,10,0	0/0:8,0:8:18.05:0,18,394	0/0:29,0:15:42.14:0,42,978	0/0:26,0:16:43.63:0,44,846	1/1:11,0:10:18:210,18,0	0/0:25,0:25:66.23:0,66,1669	0/0:12,0:12:30.10:0,30,757	0/0:41,0:41:99:0,102,2445	1/1:14,0:14:15.93:224,16,0	1/1:8,0:8:10.45:155,10,0	1/1:10,0:9:8.10:172,8,0	1/1:8,0:8:9.01:89,9,0	1/1:6,0:6:16.54:164,17,0	1/1:6,0:6:9.02:125,9,0	1/1:3,9:12:5.91:97,6,0	1/1:2,0:2:5.92:41,6,0	1/1:13,0:13:11.67:192,12,0	0/1:14,0:14:21.61:266,0,22	0/0:21,0:20:54.19:0,54,1394	0/0:20,0:20:54.19:0,54,1368	0/0:11,0:10:27.09:0,27,685	./.	1/1:10,0:10:6.01:75,6,0	0/1:10,0:10:0.09:0,0,0	1/1:14,0:14:12.03:144,12,0	1/1:10,0:10:13.85:131,14,0	0/0:13,0:13:36.12:0,36,874	0/0:1,0:1:1.82:0,2,5
chr10	31631684	.	GGTC	G	6151.96	PASS	AB=1.000;AC=34;AF=0.607;AN=56;BaseQRankSum=10.348;DP=588;FS=1.636;HRun=0;HaplotypeScore=126.2914;InbreedingCoeff=0.8922;MQ=45.25;MQ0=12;MQRankSum=1.472;QD=16.28;ReadPosRankSum=3.422;VQSLOD=4.7315;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:25,1:26:34.88:347,35,0	0/0:12,0:11:29.71:0,30,223	0/0:13,0:7:14.93:0,15,118	0/0:12,0:8:23.89:0,24,197	1/1:18,0:18:43.23:360,43,0	0/0:22,0:22:55.28:0,55,419	0/0:24,0:24:66.85:0,67,440	0/0:26,0:22:44.12:0,44,319	1/1:15,0:14:36:317,36,0	1/1:21,1:20:38.55:419,39,0	1/1:22,0:22:10.60:266,11,0	1/1:21,1:21:40.99:318,41,0	1/1:21,0:21:38.28:307,38,0	1/1:20,0:19:50.60:387,51,0	1/1:15,0:15:42.43:337,42,0	1/1:19,0:17:36.03:285,36,0	1/1:32,0:31:59.17:493,59,0	1/1:21,1:21:46.46:396,46,0	0/0:25,0:21:55.99:0,56,405	0/0:26,0:26:66.12:0,66,539	0/0:18,0:18:46.79:0,47,322	0/1:16,0:15:1.08:225,0,1	1/1:10,0:10:14.80:133,15,0	1/1:42,3:44:90.79:691,91,0	1/1:18,1:18:41.73:329,42,0	0/1:20,0:20:3.93:223,0,4	0/0:32,0:32:68.76:0,69,475	1/1:14,0:14:38.05:319,38,0
chr10	31631749	.	T	TC	1343.30	PASS	AB=0.932;AC=10;AF=0.179;AN=56;BaseQRankSum=3.049;DP=374;FS=32.606;HRun=1;HaplotypeScore=88.1694;InbreedingCoeff=-0.0644;MQ=28.35;MQ0=39;MQRankSum=-3.359;QD=8.34;ReadPosRankSum=4.648;VQSLOD=-0.7615;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:9:8.99:0,9,93	0/1:5,0:5:7:7,0,71	0/0:29,0:1:3.01:0,3,39	0/0:20,0:4:11.87:0,12,96	0/0:7,0:4:9.03:0,9,105	0/1:13,1:13:78.83:79,0,173	0/1:15,1:12:71.43:105,0,71	1/1:42,1:16:7.29:295,7,0	0/0:9,0:8:9.48:0,9,95	0/0:11,0:9:20.98:0,21,234	0/0:11,0:10:11.89:0,12,112	0/0:8,0:5:8.89:0,9,81	0/0:13,0:10:21.04:0,21,253	0/0:12,0:9:23.91:0,24,238	0/0:8,0:7:21.03:0,21,237	0/0:9,0:6:14.96:0,15,148	0/0:8,1:8:11.94:0,12,107	0/0:4,0:3:6.47:0,6,57	0/1:16,0:10:72.03:72,0,74	0/1:23,4:23:99:457,0,222	0/1:4,1:5:31.42:31,0,96	0/0:9,0:7:13.86:0,14,158	0/0:9,0:4:9.03:0,9,113	0/1:13,0:12:10.44:10,0,299	0/0:13,0:7:8.89:0,9,81	0/0:12,1:11:21.03:0,21,239	0/1:19,3:19:99:427,0,168	0/0:8,0:2:6.02:0,6,77
chr10	31631755	.	TC	T	1837.88	PASS	AB=0.772;AC=36;AF=0.667;AN=54;BaseQRankSum=-5.701;DP=334;FS=3.065;HRun=2;HaplotypeScore=82.4949;InbreedingCoeff=-0.0147;MQ=26.76;MQ0=29;MQRankSum=2.011;QD=8.06;ReadPosRankSum=-2.818;VQSLOD=0.1387;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,4:8:3.01:38,3,0	0/1:3,1:4:26.65:27,0,110	0/0:30,0:1:3.01:0,3,44	0/0:27,0:4:12.04:0,12,173	1/1:2,4:3:6.01:59,6,0	0/1:9,4:12:87.22:87,0,175	0/0:14,0:11:27.04:0,27,321	0/0:33,0:17:35.80:0,36,443	0/1:2,5:6:38.09:68,0,38	0/1:5,4:7:5.31:110,0,5	1/1:2,6:7:7.22:62,7,0	1/1:2,3:2:6.02:78,6,0	1/1:5,7:10:17.85:200,18,0	1/1:5,5:7:10.74:155,11,0	1/1:2,5:6:2.75:165,3,0	1/1:3,4:4:6.02:69,6,0	1/1:4,1:4:2.98:22,3,0	./.	0/1:15,1:10:56.47:56,0,190	0/1:26,2:24:99:125,0,539	0/1:3,3:5:31.89:56,0,32	1/1:3,4:5:9.03:106,9,0	1/1:2,7:4:9.03:108,9,0	0/1:7,3:9:20.19:110,0,20	1/1:1,9:5:3.01:39,3,0	0/1:6,3:7:34.38:69,0,34	0/1:17,5:19:99:125,0,510	1/1:3,5:2:6.02:70,6,0
chr10	31631770	.	TTCC	T	1131.57	PASS	AB=0.867;AC=11;AF=0.262;AN=42;BaseQRankSum=0.709;DP=306;FS=23.726;HRun=0;HaplotypeScore=83.4490;InbreedingCoeff=0.5616;MQ=26.38;MQ0=20;MQRankSum=-0.633;QD=11.91;ReadPosRankSum=3.019;VQSLOD=1.7022;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	0/0:4,0:4:9.03:0,9,119	0/0:37,0:6:8.85:0,9,143	0/0:37,0:7:14.64:0,15,224	0/0:7,0:3:2.50:0,2,9	0/0:12,0:11:26.89:0,27,263	0/0:12,0:10:17.66:0,18,170	1/1:19,1:14:11.93:109,12,0	0/0:3,0:3:2.90:0,3,16	0/0:6,0:5:8.89:0,9,61	./.	./.	0/0:14,0:11:8.88:0,9,58	0/0:11,0:8:8.81:0,9,55	0/0:2,0:2:2.68:0,3,11	0/0:6,0:3:2.50:0,2,9	./.	./.	0/1:11,2:9:1.91:118,0,2	1/1:13,13:23:30.54:576,31,0	1/1:5,0:4:2.94:18,3,0	0/0:5,0:3:2.96:0,3,19	./.	0/0:4,0:4:2.97:0,3,20	1/1:10,0:4:1.25:3,1,0	0/0:10,0:8:18.28:0,18,96	1/1:12,9:18:20.46:442,20,0	./.
chr10	31631785	.	CT	C	255.32	PASS	AB=0.792;AC=14;AF=0.318;AN=44;BaseQRankSum=-1.852;DP=309;FS=1.342;HRun=2;HaplotypeScore=82.4200;InbreedingCoeff=0.3386;MQ=40.23;MQ0=18;MQRankSum=-1.821;QD=3.00;ReadPosRankSum=-0.492;VQSLOD=-0.2988;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	0/0:5,0:5:12.02:0,12,154	0/0:33,1:11:23.34:0,23,265	0/0:35,1:12:7.19:0,7,333	0/0:3,4:3:2.99:0,3,23	0/0:10,0:9:27.07:0,27,338	0/0:8,0:8:13.49:0,13,213	0/0:14,0:10:19.55:0,20,192	0/0:3,0:3:5.98:0,6,74	0/1:5,2:6:22.84:44,0,23	./.	./.	0/1:8,3:12:16.75:17,0,34	0/0:9,1:7:5.91:0,6,80	1/1:3,0:2:2.44:5,2,0	1/1:4,2:2:3.01:35,3,0	1/1:4,3:3:1.25:3,1,0	./.	0/1:12,2:10:17.51:18,0,123	0/0:28,0:26:54.55:0,55,316	0/0:4,0:3:5.97:0,6,50	0/1:4,0:4:0:0,0,0	./.	0/0:4,0:3:6.02:0,6,76	1/1:2,4:6:5.96:48,6,0	1/1:7,3:14:22.33:217,22,0	0/0:20,1:19:2.07:0,2,244	./.
chr10	31631796	.	TC	T	464.05	PASS	AB=0.834;AC=11;AF=0.239;AN=46;BaseQRankSum=2.411;DP=289;FS=27.869;HRun=2;HaplotypeScore=72.8983;InbreedingCoeff=0.2032;MQ=43.52;MQ0=18;MQRankSum=-1.529;QD=7.37;ReadPosRankSum=2.199;VQSLOD=-0.6443;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:4:2.98:0,3,22	0/1:2,3:5:11.36:104,0,11	0/0:43,0:12:26.88:0,27,356	0/0:34,2:11:27.07:0,27,382	./.	1/1:0,7:7:21.07:268,21,0	0/1:1,5:6:26.59:175,0,27	0/0:11,0:8:14.52:0,15,140	0/0:1,0:1:3.01:0,3,45	0/1:8,0:7:3.33:3,0,56	./.	./.	0/0:13,0:10:6:0,6,68	0/0:8,0:5:9.03:0,9,127	0/0:2,0:1:3.01:0,3,45	1/1:4,1:2:2.60:10,3,0	0/0:8,0:3:3.01:0,3,45	./.	0/0:14,0:10:13.03:0,13,162	0/0:25,0:24:56.82:0,57,560	0/0:2,0:2:3:0,3,27	0/0:4,0:4:8.92:0,9,63	0/1:7,0:2:0:0,0,0	0/0:5,0:3:6.02:0,6,89	1/1:11,0:6:1.07:3,1,0	0/1:14,0:14:20.14:20,0,74	0/0:17,0:17:13.08:0,13,279	./.
chr10	31631846	.	TTC	T	503.17	PASS	AB=0.933;AC=6;AF=0.115;AN=52;BaseQRankSum=8.135;DP=395;FS=0.000;HRun=0;HaplotypeScore=81.2358;InbreedingCoeff=-0.0746;MQ=23.16;MQ0=91;MQRankSum=-0.893;QD=4.93;ReadPosRankSum=-2.568;VQSLOD=1.8989;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:8:9.03:0,9,112	0/1:13,2:12:69.78:70,0,106	./.	./.	0/0:14,0:9:21.07:0,21,265	0/1:9,4:10:99:116,0,137	0/0:13,0:6:3.01:0,3,37	0/1:18,1:3:0:0,0,0	0/0:2,0:1:3.01:0,3,37	0/0:25,0:17:48.15:0,48,648	0/0:24,0:22:27.07:0,27,333	0/0:9,0:8:6.02:0,6,76	0/0:13,0:9:9.03:0,9,113	0/0:12,0:7:18.05:0,18,216	0/0:6,0:4:12.04:0,12,150	0/0:7,1:6:12.04:0,12,148	0/0:18,0:7:12.04:0,12,149	0/0:7,0:1:3.01:0,3,37	0/1:9,0:5:25.16:50,0,25	0/1:29,0:26:99:165,0,517	0/0:10,0:10:16.49:0,16,206	0/0:17,0:10:30.10:0,30,385	0/0:14,0:8:15.05:0,15,209	0/0:21,0:14:31.84:0,32,358	0/0:22,0:18:33.08:0,33,414	0/0:29,0:20:51.14:0,51,657	0/1:17,0:14:99:215,0,129	0/0:14,0:11:9.03:0,9,126
chr10	31631849	.	TTC	T	323.69	PASS	AB=0.853;AC=5;AF=0.100;AN=50;BaseQRankSum=8.186;DP=393;FS=0.000;HRun=0;HaplotypeScore=79.9145;InbreedingCoeff=-0.1684;MQ=23.08;MQ0=91;MQRankSum=-2.191;QD=3.81;ReadPosRankSum=-3.541;VQSLOD=1.0199;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:8:9.03:0,9,112	0/1:13,2:12:53.29:53,0,107	./.	./.	0/0:14,0:9:21.07:0,21,265	0/1:12,1:10:69.73:70,0,137	0/0:11,0:4:3.01:0,3,37	./.	0/0:2,0:1:3.01:0,3,37	0/0:25,0:17:48.15:0,48,648	0/0:23,0:21:27.08:0,27,340	0/0:9,0:8:6.02:0,6,76	0/0:13,0:9:9.03:0,9,113	0/0:12,0:7:17.79:0,18,199	0/0:6,0:4:12.04:0,12,150	0/0:8,0:6:12.04:0,12,148	0/0:18,0:7:12.04:0,12,149	0/0:7,0:1:3.01:0,3,37	0/1:10,1:5:25.16:45,0,25	0/1:23,6:26:99:101,0,505	0/0:10,0:10:0.43:0,0,200	0/0:17,0:10:30.10:0,30,385	0/0:14,0:8:15.05:0,15,209	0/0:21,0:14:32.08:0,32,372	0/0:22,0:18:33.09:0,33,416	0/0:29,0:20:51.08:0,51,651	0/1:10,7:14:99:167,0,130	0/0:14,0:11:9.03:0,9,126
chr10	31631886	.	T	TC	377.60	PASS	AB=0.951;AC=7;AF=0.146;AN=48;BaseQRankSum=5.700;DP=271;FS=0.000;HRun=1;HaplotypeScore=45.6089;InbreedingCoeff=0.0098;MQ=21.93;MQ0=73;MQRankSum=0.617;QD=5.47;ReadPosRankSum=1.886;VQSLOD=0.5111;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:4:6.02:0,6,76	1/1:9,3:9:11.57:126,12,0	./.	./.	0/0:10,0:7:15.86:0,16,170	0/1:9,0:6:34.25:34,0,94	0/1:11,0:7:13.78:140,0,14	./.	./.	0/0:17,0:12:33.11:0,33,428	0/0:14,0:13:22.94:0,23,241	0/0:2,0:2:6:0,6,62	0/0:5,0:3:6.02:0,6,82	0/0:4,0:1:3.01:0,3,40	0/0:3,0:2:5.88:0,6,55	0/0:5,0:3:6.02:0,6,79	0/0:11,0:3:3.01:0,3,38	0/0:7,0:1:3.01:0,3,40	0/0:9,0:2:2.98:0,3,22	0/1:16,1:14:68.48:68,0,206	0/1:7,1:8:20.90:108,0,21	0/0:12,0:7:20.88:0,21,232	0/0:12,0:7:13.86:0,14,166	0/0:16,0:11:16.93:0,17,196	0/0:17,0:15:25.84:0,26,285	0/0:18,0:10:19.72:0,20,293	0/1:11,1:9:24.35:24,0,131	0/0:13,0:11:9.03:0,9,113
chr10	31631893	.	CCT	C	415.20	PASS	AB=0.911;AC=9;AF=0.188;AN=48;BaseQRankSum=5.079;DP=219;FS=0.000;HRun=0;HaplotypeScore=41.1172;InbreedingCoeff=-0.0477;MQ=22.09;MQ0=54;MQRankSum=0.102;QD=5.00;ReadPosRankSum=-0.028;VQSLOD=2.0466;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:4:5.84:0,6,35	0/1:10,2:9:2.46:131,0,2	./.	./.	0/0:10,0:7:11.79:0,12,64	0/1:8,1:6:22.25:42,0,22	0/1:9,0:6:9.34:71,0,9	./.	./.	0/0:10,0:8:23.57:0,24,148	0/0:8,0:8:12.01:0,12,68	0/0:2,0:2:1.55:0,2,4	0/0:4,0:3:5.89:0,6,38	0/0:4,0:1:2.98:0,3,21	0/0:3,0:2:2.92:0,3,17	0/0:4,0:3:5.91:0,6,38	0/0:11,0:3:5.89:0,6,37	0/0:5,0:1:2.96:0,3,19	1/1:7,0:1:2.50:9,2,0	0/1:13,3:13:99:112,0,155	0/1:5,2:7:20.51:137,0,21	0/0:11,0:6:13.44:0,13,86	0/0:7,0:4:7.92:0,8,42	0/0:12,0:9:11.90:0,12,87	0/0:12,0:10:17.83:0,18,126	0/1:12,0:7:10.50:11,0,77	0/1:11,0:8:25.06:25,0,70	0/0:12,0:11:8.87:0,9,67
chr10	31631894	.	C	CT	472.80	PASS	AB=0.909;AC=10;AF=0.208;AN=48;BaseQRankSum=4.991;DP=215;FS=0.000;HRun=1;HaplotypeScore=39.2080;InbreedingCoeff=0.1023;MQ=22.05;MQ0=53;MQRankSum=-0.726;QD=5.70;ReadPosRankSum=0.396;VQSLOD=0.3758;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:4:5.86:0,6,35	1/1:7,5:9:13.86:165,14,0	./.	./.	0/0:8,0:5:12.78:0,13,70	0/1:9,0:6:19.44:69,0,19	0/1:9,0:6:0.04:60,0,0	./.	./.	0/0:10,0:8:23.62:0,24,152	0/0:8,0:8:12.93:0,13,69	0/0:2,0:2:2.29:0,2,6	0/0:4,0:3:5.94:0,6,42	0/0:4,0:1:2.97:0,3,20	0/0:3,0:2:2.96:0,3,19	0/0:4,0:3:5.92:0,6,39	0/0:11,0:3:5.78:0,6,32	0/0:5,0:1:2.98:0,3,22	1/1:7,0:1:2.50:9,2,0	0/1:14,2:13:99:111,0,127	0/1:5,2:7:20.47:140,0,20	0/0:10,0:5:13.68:0,14,86	0/0:7,0:4:8.58:0,9,49	0/0:12,0:9:11.83:0,12,77	0/0:12,0:10:17.79:0,18,121	0/1:12,0:7:13.84:14,0,82	0/1:8,3:8:35.35:35,0,81	0/0:12,0:11:5.90:0,6,38
chr10	31631896	.	CTT	C	336.29	PASS	AB=0.886;AC=6;AF=0.125;AN=48;BaseQRankSum=5.590;DP=203;FS=0.000;HRun=2;HaplotypeScore=39.2351;InbreedingCoeff=-0.1668;MQ=22.04;MQ0=51;MQRankSum=-0.954;QD=5.70;ReadPosRankSum=0.801;VQSLOD=-0.5800;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:3:2.99:0,3,24	0/1:10,2:9:12.10:76,0,12	./.	./.	0/0:8,0:5:11.92:0,12,98	0/1:6,0:4:25.56:58,0,26	0/1:5,3:6:20.86:125,0,21	./.	./.	0/0:10,0:8:24.07:0,24,278	0/0:8,0:8:13.54:0,14,129	0/0:2,0:2:1.55:0,2,4	0/0:4,0:3:6:0,6,62	0/0:4,0:1:3.01:0,3,36	0/0:2,0:1:2.97:0,3,20	0/0:4,0:3:6.02:0,6,68	0/0:11,0:3:6.02:0,6,70	0/0:5,0:1:2.98:0,3,22	0/0:6,0:1:2.60:0,3,10	0/1:17,0:14:87.53:88,0,212	0/1:5,1:6:21.09:95,0,21	0/0:10,0:5:13.59:0,14,148	0/0:6,0:4:8.51:0,9,77	0/0:11,0:8:12.02:0,12,129	0/0:12,0:10:18.02:0,18,199	0/0:12,0:7:9.05:0,9,144	0/1:9,0:6:7.38:7,0,86	0/0:12,0:11:6.02:0,6,83
chr10	31634994	.	T	TTC	1124.17	PASS	AB=0.919;AC=26;AF=0.765;AN=34;BaseQRankSum=-2.181;DP=126;FS=73.593;HRun=0;HaplotypeScore=31.0164;InbreedingCoeff=0.0845;MQ=21.58;MQ0=25;MQRankSum=-2.517;QD=12.77;ReadPosRankSum=-2.714;VQSLOD=0.2163;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	1/1:5,1:5:9.09:109,9,0	1/1:2,0:1:3.01:45,3,0	1/1:4,0:1:0.89:2,1,0	0/0:13,0:6:15.05:0,15,205	./.	1/1:7,0:4:11.40:133,11,0	1/1:8,0:5:6:63,6,0	1/1:4,0:2:3.01:37,3,0	1/1:3,0:3:8.24:83,8,0	0/1:7,0:6:21.47:65,0,21	./.	./.	./.	./.	0/0:4,0:1:2.96:0,3,19	1/1:2,0:1:2.88:15,3,0	./.	0/1:15,0:11:62.19:147,0,62	0/1:5,2:4:17.59:100,0,18	0/1:8,1:6:47.56:105,0,48	1/1:5,1:4:11.71:143,12,0	1/1:6,0:5:14.98:167,15,0	1/1:1,0:1:3:27,3,0	./.
chr10	31635011	.	TC	T	229.25	PASS	AB=0.988;AC=16;AF=0.421;AN=38;BaseQRankSum=1.000;DP=120;FS=5.458;HRun=1;HaplotypeScore=30.9408;InbreedingCoeff=0.2141;MQ=21.62;MQ0=20;MQRankSum=0.381;QD=3.47;ReadPosRankSum=1.371;VQSLOD=0.1195;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:20,0:2:3.01:0,3,46	./.	1/1:5,0:4:6.94:23,7,0	0/0:2,0:1:0.47:0,0,1	./.	1/1:4,6:7:14.13:208,14,0	./.	0/0:7,0:4:4.52:0,5,42	0/1:8,0:5:1.58:2,0,2	0/1:4,0:3:2.85:3,0,4	1/1:3,0:3:7.36:26,7,0	0/1:7,0:6:2.69:3,0,3	./.	1/1:1,0:1:2.37:8,2,0	1/1:0,1:1:3:28,3,0	./.	0/0:2,0:1:2.99:0,3,23	0/0:2,0:1:0.47:0,0,1	./.	0/1:12,1:9:29.61:30,0,50	0/0:6,0:4:0:0,0,3	0/1:8,0:5:3.01:3,0,5	0/1:6,0:4:4.38:4,0,11	0/0:3,0:3:0.37:0,0,8	0/0:1,0:1:2.68:0,3,11	./.
chr10	31635013	.	T	TC	132.46	PASS	AB=0.861;AC=8;AF=0.222;AN=36;BaseQRankSum=-1.007;DP=112;FS=7.814;HRun=1;HaplotypeScore=34.0713;InbreedingCoeff=-0.0142;MQ=21.24;MQ0=19;MQRankSum=1.717;QD=2.94;ReadPosRankSum=2.171;VQSLOD=-0.6228;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:21,0:3:2.74:0,3,41	./.	0/0:5,0:4:7.31:0,7,25	0/0:2,0:1:0.47:0,0,1	./.	0/0:10,0:7:14.88:0,15,107	./.	0/1:4,1:2:1.03:1,0,18	0/1:8,0:5:1.51:2,0,2	0/0:3,0:2:5.09:0,5,19	0/0:3,0:3:7.31:0,7,26	0/1:6,1:6:11.67:40,0,12	./.	0/0:1,0:1:2.04:0,2,6	0/0:1,0:1:2.22:0,2,7	./.	0/0:2,0:1:2.68:0,3,11	./.	./.	0/1:10,2:8:34.58:35,0,69	0/1:3,1:3:17.84:39,0,18	0/1:6,2:5:19.67:82,0,20	0/0:6,0:4:9.67:0,10,42	0/0:2,0:2:3.84:0,4,13	1/1:1,0:1:3.01:35,3,0	./.
chr10	31635014	.	TTC	T	689.49	PASS	AB=0.958;AC=23;AF=0.639;AN=36;BaseQRankSum=-0.636;DP=100;FS=62.634;HRun=0;HaplotypeScore=27.2066;InbreedingCoeff=0.2706;MQ=20.96;MQ0=18;MQRankSum=-1.700;QD=14.67;ReadPosRankSum=0.251;VQSLOD=1.1644;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:21,0:3:3.01:0,3,55	./.	1/1:3,2:4:9.03:124,9,0	1/1:2,0:1:2.96:19,3,0	./.	0/0:10,0:7:14.94:0,15,124	./.	0/1:5,0:2:37.24:39,0,37	1/1:7,0:5:3.01:33,3,0	1/1:2,1:2:6.02:90,6,0	1/1:1,2:3:9.03:137,9,0	0/1:6,0:5:0.61:83,0,1	./.	1/1:1,0:1:3.01:45,3,0	1/1:1,0:1:3.01:45,3,0	./.	0/0:2,0:1:3.01:0,3,36	./.	./.	0/0:9,0:5:8.28:0,8,59	0/0:2,0:1:2.68:0,3,11	0/1:6,1:5:29.75:59,0,30	1/1:5,0:3:7.27:92,7,0	1/1:1,0:1:3.01:42,3,0	1/1:0,0:1:1.55:4,2,0	./.
chr10	31635038	.	CTT	C	1589.29	PASS	AB=1.000;AC=31;AF=0.596;AN=52;BaseQRankSum=4.751;DP=198;FS=21.247;HRun=4;HaplotypeScore=46.5286;InbreedingCoeff=0.6898;MQ=75.00;MQ0=6;MQRankSum=-2.461;QD=20.38;ReadPosRankSum=0.750;VQSLOD=0.1198;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,0:3:6.02:85,6,0	0/0:4,0:4:9.03:0,9,125	0/0:36,1:16:2.51:0,3,221	0/0:41,0:24:10.26:0,10,424	1/1:5,2:7:15.05:206,15,0	0/0:5,0:5:15.05:0,15,208	0/0:6,0:6:18.06:0,18,250	0/0:7,0:7:21.04:0,21,298	./.	1/1:4,1:5:14.64:135,15,0	1/1:8,2:10:20.76:223,21,0	1/1:4,2:5:11.83:139,12,0	1/1:2,0:2:6.01:72,6,0	0/1:3,0:3:7.71:8,0,9	./.	1/1:1,1:2:6.02:72,6,0	1/1:3,1:4:6.02:74,6,0	1/1:1,4:5:11.60:169,12,0	0/0:5,0:5:9.86:0,10,163	0/0:5,0:5:15.05:0,15,208	0/0:1,0:1:3.01:0,3,42	1/1:2,3:4:3.01:42,3,0	1/1:6,0:6:8.65:70,9,0	1/1:7,1:8:17.85:224,18,0	1/1:3,2:4:8.86:99,9,0	1/1:3,2:5:4.11:133,4,0	0/0:6,0:6:18.06:0,18,290	1/1:2,0:2:5.60:26,6,0
chr10	31635040	.	T	TC	2279.58	PASS	AB=0.800;AC=36;AF=0.643;AN=56;BaseQRankSum=4.594;DP=213;FS=18.611;HRun=0;HaplotypeScore=45.5517;InbreedingCoeff=0.6430;MQ=73.44;MQ0=6;MQRankSum=-2.420;QD=17.67;ReadPosRankSum=0.620;VQSLOD=3.7946;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,3:3:6.02:85,6,0	0/0:3,0:3:9.03:0,9,125	0/1:41,0:19:1.08:1,0,219	0/0:44,0:25:12.02:0,12,397	1/1:4,3:7:15.05:207,15,0	0/0:6,0:6:15.05:0,15,208	0/0:6,0:6:18.06:0,18,250	0/0:7,0:7:21.04:0,21,271	1/1:4,0:4:9.03:114,9,0	1/1:1,4:5:15.05:229,15,0	1/1:2,8:10:21.07:307,21,0	1/1:4,4:7:12.04:176,12,0	1/1:1,2:3:6.02:90,6,0	0/1:1,2:3:10.52:42,0,11	1/1:1,0:1:3.01:42,3,0	1/1:1,1:2:6.02:90,6,0	1/1:1,3:4:6.02:90,6,0	1/1:5,0:5:11.60:169,12,0	0/0:5,0:5:11:0,11,165	0/0:5,0:5:15.05:0,15,208	0/0:1,0:1:3.01:0,3,42	1/1:3,1:3:3.01:42,3,0	1/1:2,7:9:9.03:138,9,0	1/1:1,7:8:18.06:261,18,0	1/1:2,3:4:9.03:133,9,0	1/1:3,2:5:1.26:161,1,0	0/0:6,0:6:18.06:0,18,242	1/1:0,2:2:6.02:96,6,0
chr10	31635127	.	GT	G	2955.53	PASS	AB=1.000;AC=41;AF=0.732;AN=56;BaseQRankSum=2.862;DP=311;FS=30.841;HRun=10;HaplotypeScore=65.4746;InbreedingCoeff=0.7372;MQ=68.21;MQ0=1;MQRankSum=-2.585;QD=11.68;ReadPosRankSum=2.657;VQSLOD=1.0147;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,0:8:18.99:85,19,0	0/0:3,0:3:6:0,6,58	0/0:12,0:8:1.06:0,1,70	0/0:7,0:6:9.74:0,10,70	1/1:18,0:18:4.75:97,5,0	0/0:14,0:14:36.02:0,36,375	0/0:9,0:9:22.87:0,23,237	1/1:6,17:23:41.93:405,42,0	0/0:5,0:5:15.04:0,15,165	1/1:6,0:6:15.75:71,16,0	1/1:16,0:16:38.70:207,39,0	0/1:9,0:9:8.27:48,0,8	1/1:5,0:5:2.64:24,3,0	1/1:11,0:11:24.49:126,24,0	0/0:8,0:8:24.05:0,24,256	1/1:8,0:8:18.02:72,18,0	1/1:11,0:11:24.80:115,25,0	1/1:18,0:18:27.22:214,27,0	1/1:2,6:7:17.49:140,17,0	1/1:0,11:11:29.99:260,30,0	1/1:1,4:5:12:104,12,0	1/1:13,0:13:8.02:148,8,0	1/1:16,0:16:7.88:124,8,0	1/1:16,0:16:39.23:204,39,0	1/1:13,1:14:9.50:135,9,0	1/1:13,0:13:7.21:72,7,0	1/1:0,15:15:44.99:391,45,0	1/1:9,0:9:21.84:98,22,0
chr10	31635136	.	TTA	T	638.86	PASS	AB=0.974;AC=27;AF=0.482;AN=56;BaseQRankSum=10.235;DP=322;FS=61.065;HRun=0;HaplotypeScore=79.9564;InbreedingCoeff=0.4060;MQ=68.01;MQ0=1;MQRankSum=-4.318;QD=3.10;ReadPosRankSum=4.548;VQSLOD=-0.7165;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:9,0:9:16.53:70,17,0	0/0:3,0:3:9.02:0,9,136	0/0:13,0:9:5:0,5,169	0/1:8,0:8:4.88:5,0,157	0/1:15,0:15:14.87:35,0,15	0/0:15,0:15:42.04:0,42,665	0/0:11,0:11:33.07:0,33,495	0/0:23,0:23:41.15:0,41,360	0/1:9,0:9:32.24:32,0,75	1/1:7,0:7:11.71:48,12,0	1/1:14,1:15:20.75:86,21,0	0/1:8,0:8:7.03:7,0,20	0/1:4,1:5:1.52:53,0,2	1/1:9,1:10:13.21:67,13,0	0/0:8,0:8:23.60:0,24,150	1/1:8,0:8:11.70:33,12,0	1/1:11,0:11:16.05:55,16,0	1/1:20,0:20:10.40:87,10,0	0/0:8,0:7:20.09:0,20,111	0/0:13,0:13:34.68:0,35,191	0/0:5,0:5:14.50:0,14,85	0/1:14,0:14:5.40:35,0,5	0/1:13,1:14:20.27:47,0,20	1/1:15,0:15:19.61:49,20,0	0/1:15,0:15:3.39:47,0,3	0/1:14,0:14:12.86:47,0,13	0/0:17,0:17:49.03:0,49,259	1/1:9,0:9:12.44:30,12,0
chr10	31635137	.	TA	T	5999.82	PASS	AB=0.967;AC=36;AF=0.643;AN=56;BaseQRankSum=3.712;DP=325;FS=25.832;HRun=3;HaplotypeScore=55.8661;InbreedingCoeff=0.6235;MQ=66.38;MQ0=1;MQRankSum=-2.730;QD=24.49;ReadPosRankSum=3.406;VQSLOD=3.1503;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,8:9:27.02:302,27,0	0/0:3,0:3:9.02:0,9,104	0/1:11,0:9:7.12:7,0,128	0/0:6,0:7:16.98:0,17,139	1/1:5,12:17:41.81:411,42,0	0/0:15,0:15:36.02:0,36,443	0/0:11,0:11:30.06:0,30,356	0/0:22,1:23:4.10:0,4,117	0/1:9,0:9:7.24:59,0,7	1/1:0,7:7:21.06:247,21,0	1/1:1,14:15:42.02:491,42,0	1/1:2,6:8:21.05:244,21,0	1/1:3,2:5:14.76:125,15,0	1/1:1,9:10:29.92:326,30,0	0/0:8,0:8:10.12:0,10,30	1/1:0,8:8:21.07:258,21,0	1/1:1,10:11:30.07:353,30,0	1/1:4,17:21:60.12:694,60,0	0/0:8,0:7:2.56:0,3,27	0/1:14,0:14:6.36:6,0,51	0/0:5,0:5:2.24:0,2,25	1/1:1,13:14:36.07:421,36,0	1/1:4,10:14:38.99:415,39,0	1/1:0,15:15:42.13:514,42,0	1/1:3,12:15:39.11:468,39,0	1/1:6,8:14:16.06:351,16,0	0/1:17,0:17:11.51:12,0,22	1/1:0,9:9:24.08:295,24,0
chr10	31635233	.	G	GTT	8180.20	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-0.912;DP=388;FS=4.842;HRun=7;HaplotypeScore=48.6953;InbreedingCoeff=0.9556;MQ=58.20;MQ0=1;MQRankSum=-0.017;QD=36.04;ReadPosRankSum=3.851;VQSLOD=4.4525;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,16:19:48.13:759,48,0	0/0:6,0:6:12.04:0,12,140	0/0:16,0:13:36.10:0,36,418	0/0:9,0:4:3.01:0,3,35	1/1:3,8:12:30.04:409,30,0	0/0:24,0:24:63.18:0,63,734	0/0:16,0:16:45.11:0,45,512	0/0:36,0:36:90.22:0,90,1028	1/1:1,0:7:9.98:35,10,0	1/1:4,12:16:36.12:590,36,0	1/1:1,13:14:30.06:453,30,0	1/1:1,17:17:51.17:834,51,0	1/1:2,13:15:33.11:541,33,0	1/1:1,11:12:30.10:477,30,0	1/1:1,0:15:34.93:123,35,0	1/1:0,8:8:21.07:345,21,0	1/1:4,12:16:33.11:542,33,0	1/1:3,17:18:45.15:739,45,0	0/0:19,0:13:33.09:0,33,376	0/0:9,0:9:21.06:0,21,244	0/0:11,0:11:21.05:0,21,244	1/1:0,8:8:24.08:394,24,0	1/1:0,7:7:21.07:344,21,0	1/1:1,9:10:20.17:343,20,0	1/1:1,9:9:24.08:394,24,0	1/1:2,12:15:39.12:613,39,0	0/0:15,0:14:42.11:0,42,476	1/1:0,5:5:15.05:246,15,0
chr10	31636232	.	CTGTG	C	4199.34	PASS	AB=0.845;AC=16;AF=0.286;AN=56;BaseQRankSum=17.725;DP=727;FS=41.554;HRun=0;HaplotypeScore=310.5135;InbreedingCoeff=-0.3422;MQ=80.93;MQ0=0;MQRankSum=-18.490;QD=11.11;ReadPosRankSum=5.535;VQSLOD=1.6082;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:21,9:30:99:431,0,308	0/0:17,0:17:48.16:0,48,1282	0/0:24,0:24:72.23:0,72,1926	0/0:29,0:29:75.22:0,75,2032	0/1:31,5:36:99:313,0,260	0/0:35,0:35:99:0,105,2939	0/0:24,0:24:69.24:0,69,1894	0/0:32,0:32:90.31:0,90,2524	0/0:36,0:36:99:0,99,2675	0/1:25,7:32:99:427,0,283	0/1:25,4:29:99:346,0,192	0/1:19,7:26:99:364,0,158	0/1:16,8:24:99:469,0,192	0/1:20,2:22:99:123,0,134	0/0:40,0:40:99:0,120,3353	0/1:25,4:29:99:276,0,190	0/1:9,5:14:25.11:126,0,25	0/1:6,1:7:2.85:73,0,3	0/0:22,0:22:66.23:0,66,1846	0/0:29,0:29:84.29:0,84,2350	0/0:33,0:33:99:0,99,2696	0/1:23,5:28:99:292,0,227	0/1:19,1:20:83.67:112,0,84	0/1:18,8:26:91.56:273,0,92	0/1:19,6:25:99:277,0,164	0/1:20,4:24:99:269,0,177	0/0:28,0:28:84.29:0,84,2313	0/1:6,0:6:10.78:28,0,11
chr10	31636233	.	T	TG	10919.48	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=18.705;DP=717;FS=0.904;HRun=1;HaplotypeScore=256.1625;InbreedingCoeff=0.9567;MQ=81.97;MQ0=0;MQRankSum=-17.728;QD=29.51;ReadPosRankSum=5.600;VQSLOD=4.1141;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,19:30:29.04:745,29,0	0/0:16,0:16:48.14:0,48,607	0/0:25,0:25:69.22:0,69,885	0/0:30,0:30:72.13:0,72,892	1/1:7,28:35:54.48:1072,54,0	0/0:35,0:35:99:0,105,1363	0/0:23,0:23:69.21:0,69,881	0/0:31,0:31:90.29:0,90,1157	0/0:33,0:33:96.30:0,96,1232	1/1:11,21:32:32.84:919,33,0	1/1:5,24:29:57.84:954,58,0	1/1:9,16:25:27.34:669,27,0	1/1:9,15:24:7.66:594,8,0	1/1:3,18:21:47.67:780,48,0	0/0:40,0:40:99:0,120,1526	1/1:7,21:28:50.14:942,50,0	1/1:6,8:14:17.57:373,18,0	1/1:2,5:7:13.28:232,13,0	0/0:23,0:23:69.22:0,69,896	0/0:29,0:29:84.27:0,84,1091	0/0:33,0:33:93.30:0,93,1206	1/1:6,20:26:41.22:813,41,0	1/1:2,16:18:40.38:631,40,0	1/1:11,15:26:2.61:348,3,0	1/1:6,19:25:37.23:790,37,0	1/1:5,19:24:41.12:838,41,0	0/0:29,0:29:84.26:0,84,1076	1/1:1,5:6:15.05:216,15,0
chr10	31636236	.	G	GTTCTCAAC	33139.91	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=20.645;DP=718;FS=0.000;HRun=0;HaplotypeScore=270.6511;InbreedingCoeff=0.9976;MQ=81.58;MQ0=0;MQRankSum=-21.476;QD=89.57;ReadPosRankSum=1.789;VQSLOD=4.5993;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:22,11:33:84.23:2207,84,0	0/0:15,0:15:45.15:0,45,1295	0/0:24,0:24:72.23:0,72,1802	0/0:31,0:31:77.43:0,77,2007	1/1:14,20:34:93.26:3017,93,0	0/0:35,0:35:99:0,102,2796	0/0:22,0:22:66.21:0,66,1760	0/0:34,0:34:96.31:0,96,2442	0/0:34,0:34:96.30:0,96,2603	1/1:15,14:29:84.28:2633,84,0	1/1:11,19:30:84.20:2769,84,0	1/1:12,11:24:69.18:2093,69,0	1/1:14,10:24:72.23:2150,72,0	1/1:8,14:23:60.68:2223,61,0	0/0:39,0:39:99:0,114,3199	1/1:9,17:26:78.27:2771,78,0	1/1:8,7:15:36.12:1372,36,0	1/1:4,5:9:27.09:1136,27,0	0/0:23,0:23:69.22:0,69,1761	0/0:30,0:30:87.28:0,87,2436	0/0:33,0:33:96.33:0,96,2689	1/1:16,12:28:67.16:2167,67,0	1/1:4,13:17:48.16:1847,48,0	1/1:14,11:25:42.13:1286,42,0	1/1:10,14:25:72.23:2369,72,0	1/1:9,14:23:69.24:2430,69,0	0/0:28,0:28:84.27:0,84,2265	1/1:0,5:5:15.05:671,15,0
chr10	31636625	.	GACCT	G	7877.26	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=17.742;DP=498;FS=0.000;HRun=0;HaplotypeScore=223.9425;InbreedingCoeff=0.9876;MQ=83.62;MQ0=0;MQRankSum=-15.704;QD=30.77;ReadPosRankSum=5.945;VQSLOD=4.4250;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,17:20:38.96:463,39,0	0/0:9,0:9:27.09:0,27,729	0/0:28,0:28:81.28:0,81,2184	0/0:21,0:21:55.90:0,56,1201	1/1:3,19:22:26.86:298,27,0	0/0:26,0:26:78.27:0,78,2254	0/0:25,0:25:75.26:0,75,2135	0/0:31,0:31:93.32:0,93,2660	1/1:0,20:20:60.20:862,60,0	1/1:0,10:10:24.06:324,24,0	1/1:3,8:11:17.80:128,18,0	1/1:1,18:19:48.15:660,48,0	1/1:3,17:20:55.70:723,56,0	1/1:1,22:23:57.18:811,57,0	1/1:0,15:15:39.13:556,39,0	1/1:0,11:11:30.10:430,30,0	1/1:1,7:8:17.98:213,18,0	1/1:0,6:6:18.06:265,18,0	0/0:22,0:22:63.22:0,63,1741	0/0:30,0:30:90.31:0,90,2468	0/0:25,0:25:75.26:0,75,2174	1/1:1,12:13:24.08:342,24,0	1/1:4,6:10:20.89:203,21,0	1/1:0,11:11:14.88:209,15,0	1/1:5,8:13:30.07:386,30,0	1/1:1,19:20:57.19:838,57,0	0/0:25,0:25:75.24:0,75,2067	1/1:0,4:4:12.04:168,12,0
chr10	31636630	.	GACACAGAA	G	11912.36	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=17.704;DP=473;FS=0.741;HRun=0;HaplotypeScore=235.0139;InbreedingCoeff=0.9550;MQ=83.17;MQ0=0;MQRankSum=-16.657;QD=51.35;ReadPosRankSum=7.582;VQSLOD=3.9310;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,17:17:40.82:699,41,0	0/0:8,0:8:24.08:0,24,1092	0/0:28,0:28:78.25:0,78,2859	0/0:20,0:20:60.13:0,60,1962	1/1:1,18:20:20.12:363,20,0	0/0:26,0:26:78.27:0,78,3462	0/0:23,0:23:69.24:0,69,3193	0/0:30,0:30:90.30:0,90,3855	1/1:0,20:20:60.21:1418,60,0	1/1:2,6:8:20.90:455,21,0	1/1:1,7:9:2.95:37,3,0	1/1:0,18:18:49.30:1089,49,0	1/1:1,17:18:50.84:1097,51,0	1/1:0,22:22:52.46:1280,52,0	1/1:0,15:15:39.13:917,39,0	1/1:0,11:11:29.04:706,29,0	1/1:0,7:7:14.72:294,15,0	1/1:0,6:6:18.06:432,18,0	0/0:25,0:25:72.24:0,72,3013	0/0:30,0:30:90.31:0,90,4018	0/0:28,0:28:84.29:0,84,3619	1/1:0,12:12:24.04:506,24,0	1/1:1,6:7:10.55:156,11,0	1/1:0,11:11:15.05:348,15,0	1/1:0,8:8:24:466,24,0	1/1:0,19:19:57.20:1368,57,0	0/0:23,0:23:69.24:0,69,2821	1/1:0,4:4:12.04:279,12,0
chr10	31637086	.	A	AG	1397.13	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-9.676;DP=607;FS=2.146;HRun=4;HaplotypeScore=55.4803;InbreedingCoeff=0.9459;MQ=66.89;MQ0=1;MQRankSum=-1.559;QD=34.08;ReadPosRankSum=0.204;VQSLOD=4.0941;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,102,1141	0/0:9,0:9:21.04:0,21,229	0/0:27,0:24:57.04:0,57,626	0/0:19,0:17:47.85:0,48,500	0/0:24,0:24:69.18:0,69,773	0/0:22,0:22:66.19:0,66,749	0/0:19,0:18:54.15:0,54,612	0/0:26,0:26:72.20:0,72,817	1/1:1,14:15:42.14:575,42,0	0/0:13,0:13:39.11:0,39,443	0/0:31,0:31:81.23:0,81,919	0/0:23,0:23:69.20:0,69,783	0/0:22,0:22:57.16:0,57,647	0/0:12,0:12:33.09:0,33,374	1/1:1,25:26:69.23:944,69,0	0/0:18,0:18:51.14:0,51,579	0/0:22,0:22:60.17:0,60,680	0/0:10,0:10:27.08:0,27,306	0/0:24,0:24:63.17:0,63,708	0/0:23,0:23:63.16:0,63,705	0/0:36,0:36:93.23:0,93,1042	0/0:17,0:17:48.11:0,48,525	0/0:21,0:21:54.15:0,54,612	0/0:22,0:22:66.19:0,66,749	0/0:28,0:28:81.23:0,81,917	0/0:33,0:33:96.26:0,96,1080	0/0:25,0:25:75.21:0,75,851	0/0:3,0:3:6.02:0,6,68
chr10	31638174	.	GA	G	13753.94	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=14.016;DP=627;FS=1.295;HRun=1;HaplotypeScore=88.8177;InbreedingCoeff=0.9998;MQ=81.25;MQ0=0;MQRankSum=-2.799;QD=39.07;ReadPosRankSum=4.613;VQSLOD=5.2595;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,44:44:99:1678,120,0	0/0:11,0:11:33.11:0,33,527	0/0:32,0:32:93.05:0,93,1416	0/0:23,0:23:66.19:0,66,1021	1/1:0,19:19:42.14:587,42,0	0/0:33,0:33:99:0,99,1576	0/0:18,0:18:54.18:0,54,863	0/0:21,0:21:60.19:0,60,911	0/0:28,0:28:84.27:0,84,1317	1/1:0,19:19:57.17:777,57,0	1/1:0,12:12:36.12:499,36,0	1/1:0,25:25:72.24:1007,72,0	1/1:0,22:22:57.19:797,57,0	1/1:0,21:21:60.20:839,60,0	0/0:24,0:24:72.25:0,72,1151	1/1:0,30:30:90.30:1258,90,0	1/1:0,26:26:72.24:1007,72,0	1/1:0,15:15:45.15:629,45,0	0/0:12,0:12:36.12:0,36,576	0/0:27,0:27:78.27:0,78,1242	0/0:24,0:24:69.24:0,69,1099	1/1:0,16:16:45.15:626,45,0	1/1:0,20:20:57.19:796,57,0	1/1:0,24:24:72.24:1007,72,0	1/1:0,22:22:51.17:713,51,0	1/1:0,28:28:84.27:1157,84,0	0/0:22,0:22:66.23:0,66,1055	1/1:0,9:9:27.09:377,27,0
chr10	31638747	.	T	TCACA	3054.19	PASS	AB=0.854;AC=37;AF=0.740;AN=50;BaseQRankSum=-5.856;DP=452;FS=3.753;HRun=0;HaplotypeScore=110.4595;InbreedingCoeff=0.3908;MQ=62.65;MQ0=8;MQRankSum=2.245;QD=9.82;ReadPosRankSum=-0.392;VQSLOD=2.9395;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:20,6:32:24.71:152,0,25	1/1:4,2:6:6.02:140,6,0	./.	./.	1/1:21,3:24:2.99:68,3,0	1/1:12,4:19:6.02:140,6,0	1/1:26,2:28:14.62:221,15,0	./.	0/0:12,0:12:8.04:0,8,62	1/1:12,0:12:18.04:276,18,0	1/1:13,4:18:6.02:140,6,0	1/1:13,2:16:8.97:207,9,0	1/1:4,5:11:8.86:154,9,0	1/1:6,1:7:3.01:70,3,0	0/0:12,0:11:6.48:0,6,57	0/1:12,2:14:28.42:197,0,28	1/1:11,0:10:3.01:69,3,0	1/1:11,0:10:2.44:39,2,0	0/0:11,0:16:18.02:0,18,167	0/1:8,0:12:10.71:11,0,13	0/0:18,0:20:2.80:0,3,7	1/1:13,1:13:5.96:122,6,0	1/1:6,7:13:8.97:197,9,0	1/1:13,1:13:12.02:202,12,0	1/1:16,1:16:12.03:206,12,0	1/1:10,0:16:18.02:249,18,0	0/0:12,0:15:8.80:0,9,69	1/1:3,7:12:17.99:350,18,0
chr10	31638786	.	CACACACACAT	C	823.54	PASS	AB=1.000;AC=12;AF=0.214;AN=56;BaseQRankSum=1.626;DP=433;FS=0.000;HRun=0;HaplotypeScore=159.2695;InbreedingCoeff=0.1293;MQ=49.67;MQ0=11;MQRankSum=-2.716;QD=6.01;ReadPosRankSum=-1.683;VQSLOD=2.4752;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:27.07:0,27,860	0/0:8,0:6:12.04:0,12,560	0/0:22,0:14:29.82:0,30,390	0/0:23,0:14:35.17:0,35,422	0/0:22,0:19:9.47:0,9,258	0/0:18,0:16:16.28:0,16,556	0/0:19,0:17:26.82:0,27,834	0/0:10,0:9:26.91:0,27,219	1/1:2,16:18:14.79:374,15,0	0/1:15,0:15:21.14:21,0,846	0/1:20,0:20:11.65:12,0,213	0/1:11,0:11:42.98:43,0,254	0/1:11,0:11:11:11,0,341	0/1:6,0:6:14.97:15,0,133	1/1:5,4:9:12.04:385,12,0	0/0:14,0:13:21.07:0,21,718	0/1:11,0:9:16.98:17,0,143	0/0:9,0:8:13.72:0,14,316	0/0:16,0:14:41.03:0,41,312	0/0:18,0:18:31.14:0,31,323	0/0:26,0:25:38.99:0,39,531	0/0:11,0:8:2.65:0,3,116	0/0:13,0:13:11.70:0,12,387	0/1:14,0:12:2.91:3,0,570	0/0:19,0:17:17.91:0,18,628	0/1:22,0:21:97.71:98,0,894	0/0:12,0:12:23.80:0,24,296	0/0:11,0:11:24.08:0,24,793
chr10	31639785	.	AGCAGACTCGT	A	5253.88	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=11.583;DP=660;FS=0.511;HRun=0;HaplotypeScore=222.1405;InbreedingCoeff=0.9913;MQ=78.52;MQ0=0;MQRankSum=-12.244;QD=75.06;ReadPosRankSum=1.870;VQSLOD=4.7764;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:60.21:0,60,3143	1/1:3,6:9:12.04:391,12,0	0/0:22,0:21:48.14:0,48,2041	0/0:22,0:22:63.19:0,63,2413	0/0:25,0:25:69.22:0,69,3189	1/1:2,21:23:60.21:1871,60,0	1/1:1,16:17:39.13:1137,39,0	0/0:28,0:28:69.24:0,69,3131	1/1:0,21:21:57.20:1854,57,0	0/0:34,0:34:93.31:0,93,4641	0/0:22,0:22:63.22:0,63,3133	0/0:20,0:20:57.20:0,57,2896	0/0:26,0:26:75.26:0,75,3784	0/0:22,0:22:63.20:0,63,2932	0/0:26,0:26:78.27:0,78,3823	0/0:19,0:19:57.20:0,57,2768	0/0:28,0:28:84.29:0,84,4207	0/0:28,0:28:81.28:0,81,4246	0/0:18,0:18:45.15:0,45,2198	0/0:31,0:31:90.31:0,90,4502	0/0:28,0:28:78.25:0,78,3666	0/0:25,0:25:63.22:0,63,3270	0/0:22,0:22:66.23:0,66,3451	0/0:24,0:24:72.25:0,72,3748	0/0:33,0:33:93.32:0,93,4717	0/0:28,0:28:81.26:0,81,3829	0/0:25,0:24:69.24:0,69,3258	0/0:13,0:13:39.13:0,39,1944
chr10	31640661	.	G	GA	10672.80	PASS	AB=0.604;AC=39;AF=0.696;AN=56;BaseQRankSum=-2.314;DP=651;FS=0.681;HRun=9;HaplotypeScore=127.4350;InbreedingCoeff=0.8378;MQ=77.69;MQ0=0;MQRankSum=-3.250;QD=24.88;ReadPosRankSum=3.127;VQSLOD=3.5000;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,15:18:50.80:526,51,0	1/1:0,8:8:24.06:266,24,0	0/0:21,0:21:38.94:0,39,333	0/0:10,0:10:25.55:0,26,212	1/1:5,23:28:63.12:676,63,0	1/1:3,31:35:93.08:1010,93,0	1/1:2,17:19:51.14:564,51,0	0/0:5,0:34:55.94:0,56,163	1/1:3,21:25:50.18:563,50,0	1/1:8,23:31:23.09:711,23,0	1/1:5,20:25:33.96:574,34,0	1/1:3,21:24:57.15:630,57,0	0/1:10,19:29:6.08:591,0,6	1/1:2,14:16:42.11:464,42,0	0/0:5,0:26:38.69:0,39,114	1/1:5,17:22:2.12:479,2,0	1/1:0,12:12:36.10:398,36,0	1/1:2,17:19:48.13:531,48,0	0/0:8,0:31:45.69:0,46,134	0/0:2,0:36:69.26:0,69,204	0/0:6,0:35:59.07:0,59,174	1/1:6,18:25:54.45:580,54,0	1/1:5,17:22:2.48:449,2,0	1/1:3,12:15:10.04:338,10,0	1/1:6,14:21:38.94:412,39,0	1/1:4,27:31:81.19:877,81,0	0/0:3,0:29:48.89:0,49,144	1/1:3,1:4:3.01:33,3,0
chr10	31641972	.	CTTATTTT	C	5331.87	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=1.998;DP=539;FS=5.334;HRun=0;HaplotypeScore=146.5829;InbreedingCoeff=0.9685;MQ=72.90;MQ0=2;MQRankSum=-6.526;QD=45.57;ReadPosRankSum=-1.227;VQSLOD=4.3160;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:86.48:0,86,2740	0/0:7,0:7:17.97:0,18,423	0/0:22,0:17:41.15:0,41,819	0/0:16,0:10:7.78:0,8,181	0/0:22,0:22:54.53:0,55,1422	0/0:25,0:24:54.13:0,54,1539	0/0:16,0:16:36.11:0,36,1152	1/1:2,28:30:72.96:1146,73,0	0/0:18,0:18:45.13:0,45,1423	0/0:15,0:15:45.13:0,45,1369	0/0:16,0:16:39.12:0,39,1164	0/0:17,0:17:33.06:0,33,847	0/0:17,0:17:30.07:0,30,877	0/0:10,0:10:21.53:0,22,592	1/1:0,19:19:45.15:1156,45,0	0/0:15,0:15:33.58:0,34,1007	0/0:40,0:40:79.13:0,79,2613	0/0:20,0:20:26.72:0,27,801	1/1:0,15:15:45.05:795,45,0	1/1:1,24:27:74.66:1115,75,0	1/1:0,9:9:9.01:231,9,0	0/0:16,0:16:42.08:0,42,1015	0/0:14,0:14:33.87:0,34,933	0/0:27,0:27:57.29:0,57,1810	0/0:22,0:22:40.92:0,41,1134	0/0:17,0:17:48.12:0,48,1340	1/1:0,16:17:39.05:889,39,0	0/0:9,0:9:18.06:0,18,627
chr10	31641975	.	A	AT	2926.61	PASS	AB=0.642;AC=30;AF=0.536;AN=56;BaseQRankSum=-9.690;DP=550;FS=2.233;HRun=15;HaplotypeScore=103.0796;InbreedingCoeff=0.2528;MQ=70.38;MQ0=4;MQRankSum=7.096;QD=7.32;ReadPosRankSum=1.936;VQSLOD=3.0514;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:9,34:42:36.37:519,36,0	1/1:2,5:7:5.99:50,6,0	0/0:22,0:17:5.30:0,5,28	0/0:14,0:8:5.85:0,6,35	1/1:7,13:22:20.85:173,21,0	1/1:8,19:28:29.09:265,29,0	1/1:5,9:15:17.81:136,18,0	0/0:28,0:28:18.21:0,18,58	0/1:10,5:17:9.45:155,0,9	1/1:6,9:15:5.96:159,6,0	1/1:7,10:18:5.80:147,6,0	0/1:6,12:19:15.22:90,0,15	1/1:4,13:17:8.96:175,9,0	0/1:3,7:10:3.18:75,0,3	0/0:19,0:19:30.56:0,31,95	0/1:7,9:17:0.19:97,0,0	0/1:15,27:43:93.90:236,0,94	1/1:3,16:19:20.81:176,21,0	0/0:15,0:15:16.26:0,16,51	0/0:26,0:26:22.33:0,22,70	0/0:9,0:9:6.10:0,6,19	1/1:6,10:16:14.98:126,15,0	0/1:8,9:17:23.52:39,0,24	0/1:12,17:29:30.35:211,0,30	0/1:8,10:19:11.52:117,0,12	0/1:9,7:17:9.02:128,0,9	0/0:17,0:17:22.38:0,22,70	0/1:5,5:10:24.04:39,0,24
chr10	31642454	.	A	AGG	6259.77	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=-3.791;DP=622;FS=8.983;HRun=9;HaplotypeScore=100.8244;InbreedingCoeff=0.9704;MQ=79.86;MQ0=5;MQRankSum=-3.052;QD=19.94;ReadPosRankSum=-0.168;VQSLOD=3.1150;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:12,15:33:28.82:367,29,0	0/0:8,0:8:12.64:0,13,141	0/0:72,0:41:54.96:0,55,569	0/0:55,0:29:32.06:0,32,326	1/1:17,5:26:45.30:470,45,0	0/0:21,0:21:51.11:0,51,542	0/0:19,0:20:56.96:0,57,588	0/0:23,0:23:24.02:0,24,255	0/0:16,0:16:42.06:0,42,424	1/1:4,8:13:23.43:309,23,0	1/1:9,7:16:15.50:198,16,0	1/1:5,12:19:40.86:541,41,0	1/1:6,15:26:49.26:650,49,0	1/1:8,13:21:36.12:528,36,0	0/0:18,0:18:5.77:0,6,343	1/1:6,13:22:42.12:580,42,0	1/1:9,3:23:33.07:369,33,0	1/1:2,9:12:23.44:331,23,0	0/0:14,0:14:33.06:0,33,351	0/0:18,0:18:33.05:0,33,351	0/0:20,0:20:51.06:0,51,524	1/1:7,6:16:13.77:155,14,0	1/1:6,11:19:22.90:331,23,0	1/1:7,18:26:45.15:692,45,0	1/1:9,6:17:17.42:220,17,0	1/1:9,7:18:28.77:337,29,0	0/0:22,0:22:51.07:0,51,542	1/1:1,3:6:14.41:182,14,0
chr10	31643663	.	GA	G	6658.47	PASS	AB=0.731;AC=40;AF=0.714;AN=56;BaseQRankSum=9.698;DP=575;FS=15.174;HRun=12;HaplotypeScore=65.7344;InbreedingCoeff=0.6660;MQ=65.07;MQ0=0;MQRankSum=-2.363;QD=14.93;ReadPosRankSum=3.607;VQSLOD=4.1710;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,21:25:53.76:418,54,0	1/1:3,8:12:22.95:168,23,0	0/0:8,0:6:14.98:0,15,136	0/0:9,0:9:17.61:0,18,149	1/1:3,28:31:71.69:557,72,0	1/1:3,22:26:34.35:440,34,0	1/1:4,16:22:23.59:312,24,0	0/1:19,2:22:1.58:2,0,315	1/1:3,16:19:44.82:348,45,0	0/1:5,14:19:15.89:257,0,16	1/1:3,20:23:26.32:387,26,0	1/1:0,14:14:32.87:255,33,0	1/1:1,16:17:44.82:348,45,0	0/1:1,9:10:6.53:139,0,7	0/0:19,2:21:13.59:0,14,481	1/1:5,16:21:14.38:295,14,0	1/1:2,19:21:50.79:395,51,0	1/1:3,7:10:20.86:158,21,0	0/1:17,2:19:4.37:4,0,323	0/0:39,5:45:11.35:0,11,846	0/0:8,1:10:0.64:0,1,174	1/1:3,21:24:32.31:434,32,0	1/1:4,19:23:23.37:364,23,0	1/1:3,18:22:49.85:377,50,0	1/1:3,21:24:29.32:411,29,0	1/1:6,20:26:29.28:405,29,0	0/0:33,3:35:29.49:0,29,838	1/1:5,11:16:23.85:186,24,0
chr10	31644008	.	C	CCA	3752.09	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=2.346;DP=555;FS=9.580;HRun=0;HaplotypeScore=200.2339;InbreedingCoeff=0.9788;MQ=79.63;MQ0=0;MQRankSum=-6.093;QD=19.05;ReadPosRankSum=0.546;VQSLOD=3.1086;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:78.22:0,78,1187	1/1:6,0:6:8.10:34,8,0	0/0:20,0:20:60.20:0,60,971	0/0:20,0:20:54.08:0,54,781	0/0:19,0:19:44.93:0,45,641	1/1:23,1:23:46.07:407,46,0	1/1:17,0:17:26.60:130,27,0	1/1:26,4:30:87.99:726,88,0	1/1:26,2:28:61.83:552,62,0	0/0:21,0:21:57.19:0,57,904	0/0:17,0:17:33.11:0,33,534	0/0:20,0:20:45.13:0,45,678	0/0:22,0:22:45.15:0,45,723	0/0:25,0:25:54.17:0,54,843	1/1:15,0:15:39.86:339,40,0	0/0:26,0:26:69.24:0,69,1104	0/0:18,0:18:24.08:0,24,383	0/0:14,0:14:36:0,36,503	1/1:21,0:21:60.18:573,60,0	1/1:16,2:18:25.66:220,26,0	1/1:10,1:11:17.87:204,18,0	0/0:19,0:19:48.12:0,48,701	0/0:14,0:14:30.54:0,31,458	0/0:18,0:18:33.11:0,33,513	0/0:17,0:17:36.11:0,36,559	0/0:26,0:26:78.26:0,78,1229	1/1:27,0:27:63.15:567,63,0	0/0:5,0:5:9.03:0,9,146
chr10	31644054	.	ATATGTGTGTGTG	A	15856.40	PASS	AB=0.649;AC=34;AF=0.607;AN=56;BaseQRankSum=-2.894;DP=518;FS=35.113;HRun=0;HaplotypeScore=214.9041;InbreedingCoeff=0.6532;MQ=56.73;MQ0=3;MQRankSum=-4.652;QD=43.56;ReadPosRankSum=2.073;VQSLOD=2.9783;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:5,27:32:17.96:879,0,18	0/0:0,0:6:9.03:0,9,176	0/1:20,0:12:1.56:2,0,780	0/0:20,0:17:48.03:0,48,1577	1/1:0,17:17:18.06:651,18,0	0/0:2,0:20:27.09:0,27,605	0/0:0,0:15:18.06:0,18,353	0/1:4,0:36:81.89:82,0,875	0/0:0,0:20:35.95:0,36,656	1/1:1,19:19:48.08:1476,48,0	1/1:1,25:26:39.13:1432,39,0	1/1:0,13:13:21.07:797,21,0	1/1:0,18:18:33.11:1214,33,0	1/1:0,19:19:24.08:908,24,0	0/0:1,0:18:42.05:0,42,457	1/1:0,14:14:33.11:1265,33,0	0/1:2,18:20:34.84:511,0,35	1/1:0,10:10:12.01:359,12,0	0/0:3,0:25:5.29:0,5,681	0/0:0,0:14:27.03:0,27,252	1/1:0,0:14:0.47:1,0,0	1/1:0,18:19:36.12:1314,36,0	1/1:1,23:24:36.49:1336,36,0	1/1:0,9:9:3.48:115,3,0	1/1:1,18:19:33.11:1260,33,0	1/1:1,26:27:68.98:1853,69,0	0/0:2,0:16:21.01:0,21,192	1/1:1,5:6:12.04:402,12,0
chr10	31645156	.	CCCAGGTCA	C	7005.20	PASS	AC=38;AF=0.905;AN=42;BaseQRankSum=0.077;DP=366;FS=4.103;HRun=0;HaplotypeScore=117.1670;InbreedingCoeff=0.5001;MQ=83.00;MQ0=1;MQRankSum=-3.518;QD=22.24;ReadPosRankSum=3.673;VQSLOD=3.7621;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:13,16:29:42.10:948,42,0	1/1:5,6:9:3.01:75,3,0	0/0:31,0:28:10.28:0,10,184	0/0:16,0:14:2.97:0,3,20	1/1:7,4:11:6.02:149,6,0	1/1:10,16:26:36.12:895,36,0	1/1:10,9:19:6.02:149,6,0	./.	1/1:10,10:20:27.09:671,27,0	1/1:11,9:20:27.08:542,27,0	1/1:7,3:10:9.03:224,9,0	1/1:11,8:20:27.09:671,27,0	1/1:8,6:14:9.03:224,9,0	1/1:11,8:19:21.07:522,21,0	./.	1/1:10,2:12:6.02:149,6,0	1/1:12,8:20:12.04:298,12,0	1/1:5,8:13:12.04:298,12,0	./.	./.	./.	1/1:11,7:18:15.05:372,15,0	./.	1/1:12,6:18:6.02:149,6,0	1/1:5,10:14:9.03:224,9,0	1/1:12,5:17:15.05:373,15,0	./.	1/1:0,3:3:3.01:75,3,0
chr10	31645684	.	AT	A	2111.90	PASS	AC=32;AF=0.889;AN=36;BaseQRankSum=-1.366;DP=161;FS=38.003;HRun=9;HaplotypeScore=34.4180;InbreedingCoeff=0.5886;MQ=68.99;MQ0=5;MQRankSum=-1.532;QD=17.31;ReadPosRankSum=2.824;VQSLOD=1.6242;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,5:6:12.01:110,12,0	./.	0/0:14,0:7:5.68:0,6,69	0/0:18,1:10:8.86:0,9,90	1/1:1,6:7:18.01:164,18,0	./.	./.	./.	./.	1/1:2,14:16:39.02:357,39,0	1/1:3,3:5:9:82,9,0	1/1:1,8:9:24.01:220,24,0	1/1:6,3:8:6:55,6,0	1/1:1,4:5:12.01:110,12,0	./.	1/1:4,4:8:9:82,9,0	1/1:0,9:7:15.01:137,15,0	1/1:0,2:2:6:55,6,0	./.	./.	./.	1/1:0,7:7:21.01:191,21,0	1/1:5,0:4:3:27,3,0	1/1:1,1:2:3:27,3,0	1/1:2,4:6:18.01:164,18,0	1/1:3,7:9:21:192,21,0	./.	1/1:3,10:12:27.01:246,27,0
chr10	31645704	.	T	TA	1550.53	PASS	AC=28;AF=0.737;AN=38;BaseQRankSum=-1.951;DP=126;FS=42.580;HRun=0;HaplotypeScore=28.3940;InbreedingCoeff=0.5975;MQ=63.48;MQ0=15;MQRankSum=-0.437;QD=22.47;ReadPosRankSum=1.220;VQSLOD=1.3517;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,2:6:11.44:93,11,0	./.	0/0:20,0:8:8.88:0,9,151	0/0:26,0:12:4.70:0,5,119	1/1:0,4:4:12.04:167,12,0	./.	./.	./.	./.	1/1:3,3:6:15.03:181,15,0	1/1:1,0:1:2.92:17,3,0	1/1:2,3:5:15.02:175,15,0	1/1:1,1:1:2.99:24,3,0	1/1:2,1:3:9:91,9,0	0/0:1,0:1:3.01:0,3,40	1/1:2,1:2:6.01:67,6,0	1/1:4,5:6:11.90:104,12,0	1/1:4,1:4:5.99:62,6,0	0/0:4,0:2:3.01:0,3,41	./.	./.	1/1:1,2:3:9.02:109,9,0	./.	0/0:3,0:2:3.01:0,3,39	1/1:1,4:4:12.04:169,12,0	1/1:0,5:5:15.05:212,15,0	./.	1/1:4,4:5:15.05:210,15,0
chr10	31645712	.	A	AT	276.63	PASS	AC=18;AF=0.643;AN=28;BaseQRankSum=2.159;DP=110;FS=16.212;HRun=9;HaplotypeScore=27.4030;InbreedingCoeff=0.3909;MQ=47.65;MQ0=18;MQRankSum=-2.667;QD=6.29;ReadPosRankSum=0.762;VQSLOD=-0.1329;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,0:4:3.15:12,3,0	./.	0/0:18,0:8:2.27:0,2,26	0/0:22,0:8:2.34:0,2,43	1/1:4,0:4:2.92:17,3,0	./.	./.	./.	./.	1/1:3,1:4:5.64:50,6,0	./.	1/1:3,0:3:2.92:17,3,0	./.	./.	0/0:1,0:1:3:0,3,27	./.	1/1:7,0:4:2.03:33,2,0	./.	0/0:7,0:2:3:0,3,27	./.	./.	1/1:0,2:2:6.02:68,6,0	./.	0/0:3,0:2:3:0,3,27	1/1:4,1:4:8.94:85,9,0	1/1:4,1:5:11.78:83,12,0	./.	1/1:7,0:4:2.92:17,3,0
chr10	31645718	.	T	TTTTA	991.26	PASS	AB=0.952;AC=19;AF=0.679;AN=28;BaseQRankSum=-0.194;DP=95;FS=23.324;HRun=0;HaplotypeScore=21.7225;InbreedingCoeff=0.4039;MQ=42.68;MQ0=19;MQRankSum=-1.688;QD=16.80;ReadPosRankSum=0.581;VQSLOD=0.9904;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,1:4:3.48:54,3,0	./.	0/0:15,0:4:4.76:0,5,60	0/1:19,0:8:2.57:3,0,70	1/1:3,1:4:3.01:78,3,0	./.	./.	./.	./.	1/1:2,2:4:12.04:205,12,0	./.	1/1:0,1:1:3.01:78,3,0	./.	./.	0/0:1,0:1:3.01:0,3,53	./.	1/1:3,2:3:5.81:90,6,0	./.	0/0:6,0:1:3.01:0,3,52	./.	./.	1/1:2,0:2:6.02:68,6,0	./.	0/0:3,0:2:3.01:0,3,52	1/1:3,2:4:9.03:182,9,0	1/1:2,3:4:12.04:265,12,0	./.	1/1:3,1:1:3.01:78,3,0
chr10	31648856	.	TA	T	2567.52	PASS	AC=8;AF=0.182;AN=44;BaseQRankSum=4.495;DP=563;FS=4.980;HRun=3;HaplotypeScore=113.2993;InbreedingCoeff=0.9993;MQ=89.26;MQ0=0;MQRankSum=-1.080;QD=33.34;ReadPosRankSum=2.778;VQSLOD=3.3496;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:64,0:64:99:0,184,2594	1/1:0,11:11:33.06:391,33,0	0/0:32,0:31:87.24:0,87,1180	0/0:36,0:35:93.29:0,93,1298	0/0:23,0:23:66.22:0,66,948	1/1:3,14:17:51.15:618,51,0	1/1:0,21:21:63.20:781,63,0	./.	1/1:2,26:28:75.24:929,75,0	0/0:30,0:30:90.30:0,90,1296	0/0:16,0:16:48.16:0,48,691	0/0:29,0:29:87.29:0,87,1252	0/0:27,0:27:81.17:0,81,1101	0/0:29,0:29:81.25:0,81,1131	./.	0/0:30,0:30:87.28:0,87,1233	0/0:31,0:31:93.29:0,93,1302	0/0:20,0:20:60.18:0,60,844	./.	./.	./.	0/0:24,0:24:69.21:0,69,973	0/0:19,0:19:54.18:0,54,777	0/0:21,0:21:60.15:0,60,840	0/0:23,0:23:69.21:0,69,972	0/0:24,0:24:72.23:0,72,1003	./.	0/0:8,0:8:24.01:0,24,320
chr10	31648926	.	AC	A	3149.78	PASS	AC=8;AF=0.182;AN=44;BaseQRankSum=12.780;DP=555;FS=3.196;HRun=1;HaplotypeScore=128.0381;InbreedingCoeff=0.9904;MQ=87.83;MQ0=0;MQRankSum=-11.679;QD=34.61;ReadPosRankSum=0.220;VQSLOD=3.2832;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:62,0:62:99:0,181,2851	1/1:0,8:8:24.08:335,24,0	0/0:25,0:26:74.26:0,74,1050	0/0:17,1:18:37.39:0,37,648	0/0:21,0:21:63.19:0,63,971	1/1:1,30:31:87.23:1174,87,0	1/1:1,18:19:48.07:609,48,0	./.	1/1:3,30:33:48.31:1184,48,0	0/0:27,0:27:78.25:0,78,1220	0/0:16,0:16:45.15:0,45,715	0/0:31,0:31:93.32:0,93,1485	0/0:30,0:30:90.31:0,90,1436	0/0:16,0:16:48.15:0,48,741	./.	0/0:23,0:23:69.24:0,69,1099	0/0:38,0:38:99:0,114,1815	0/0:21,0:21:63.21:0,63,1007	./.	./.	./.	0/0:20,0:20:60.20:0,60,955	0/0:27,0:27:78.27:0,78,1241	0/0:32,0:32:96.33:0,96,1525	0/0:28,0:28:84.29:0,84,1343	0/0:24,0:24:72.25:0,72,1144	./.	0/0:4,0:4:12.04:0,12,192
chr10	31648949	.	G	GA	3791.69	PASS	AC=8;AF=0.182;AN=44;BaseQRankSum=9.861;DP=551;FS=4.720;HRun=0;HaplotypeScore=124.8621;InbreedingCoeff=0.9807;MQ=86.03;MQ0=0;MQRankSum=-10.475;QD=42.60;ReadPosRankSum=1.077;VQSLOD=2.9569;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:61,0:61:99:0,178,2439	1/1:1,9:10:18.06:287,18,0	0/0:23,0:23:66.18:0,66,852	0/0:28,0:28:81.04:0,81,1018	0/0:21,0:21:62.39:0,62,803	1/1:0,29:28:81.28:1290,81,0	1/1:2,17:19:57.13:869,57,0	./.	1/1:1,29:31:87.28:1346,87,0	0/0:27,0:27:78.25:0,78,1071	0/0:12,0:12:36.08:0,36,462	0/0:30,0:30:90.29:0,90,1239	0/0:36,0:36:99:0,108,1490	0/0:15,0:15:45.15:0,45,626	./.	0/0:25,1:26:30.25:0,30,959	0/0:38,0:38:99:0,108,1471	0/0:23,0:23:69.22:0,69,948	./.	./.	./.	0/0:21,0:21:63.19:0,63,848	0/0:24,0:24:72.24:0,72,1005	0/0:31,0:31:90.26:0,90,1233	0/0:24,0:24:72.22:0,72,985	0/0:19,0:19:57.12:0,57,773	./.	0/0:3,0:3:9.03:0,9,126
chr10	31649301	.	CTG	C	16190.25	PASS	AC=32;AF=0.667;AN=48;BaseQRankSum=3.325;DP=523;FS=9.140;HRun=0;HaplotypeScore=102.7818;InbreedingCoeff=0.9352;MQ=64.61;MQ0=4;MQRankSum=0.552;QD=42.72;ReadPosRankSum=6.474;VQSLOD=6.0846;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,44:44:99:1713,105,0	0/0:12,0:11:30.10:0,30,609	0/0:32,0:16:42.14:0,42,772	0/0:26,0:15:38.68:0,39,646	1/1:0,24:24:63.18:999,63,0	0/0:25,0:25:72.25:0,72,1425	0/0:27,0:27:81.28:0,81,1623	0/0:2,0:1:3.01:0,3,35	0/0:19,0:19:57.18:0,57,1098	1/1:0,36:35:99:1659,105,0	1/1:0,16:16:45.15:734,45,0	1/1:0,24:24:63.21:1026,63,0	1/1:0,22:22:51.17:832,51,0	1/1:0,25:25:69.24:1126,69,0	./.	1/1:0,22:22:57.19:930,57,0	1/1:0,21:21:54.18:881,54,0	1/1:0,16:16:45.15:734,45,0	0/0:1,0:1:2.99:0,3,24	./.	./.	1/1:0,29:29:69.23:1113,69,0	1/1:0,16:16:42.14:685,42,0	1/1:0,21:21:54.18:881,54,0	1/1:0,22:22:57.19:930,57,0	1/1:0,34:34:99:1605,99,0	./.	1/1:0,7:7:21.07:343,21,0
chr10	31649861	.	T	TGGGCTTTTGAATAAGTCCTCGG	8120.68	PASS	AC=8;AF=0.182;AN=44;BaseQRankSum=5.266;DP=479;FS=75.730;HRun=0;HaplotypeScore=291.8652;InbreedingCoeff=0.9946;MQ=73.51;MQ0=3;MQRankSum=-9.461;QD=169.18;ReadPosRankSum=0.015;VQSLOD=2.0785;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:81.28:0,81,4146	1/1:9,1:9:27.09:2021,27,0	0/0:28,0:21:48.16:0,48,1953	0/0:18,0:15:36.11:0,36,1775	0/0:22,0:22:63.19:0,63,3375	1/1:6,1:9:15.05:1097,15,0	1/1:9,1:11:27.09:2440,27,0	./.	1/1:13,1:16:33.11:2563,33,0	0/0:28,0:28:81.27:0,81,4092	0/0:23,0:23:60.21:0,60,3296	0/0:29,0:29:63.18:0,63,3479	0/0:27,0:27:68.83:0,69,3618	0/0:20,0:20:51.50:0,52,2818	./.	0/0:27,0:27:75.26:0,75,3647	0/0:23,0:23:54.19:0,54,3027	0/0:18,0:18:51.10:0,51,2528	./.	./.	./.	0/0:13,0:13:36.11:0,36,1879	0/0:18,0:18:48.16:0,48,2579	0/0:29,0:29:75.26:0,75,4009	0/0:24,0:23:69.22:0,69,3688	0/0:28,0:28:84.29:0,84,4610	./.	0/0:16,0:16:42.14:0,42,2507
chr10	31650766	.	T	TC	788.75	PASS	AB=0.989;AC=27;AF=0.614;AN=44;BaseQRankSum=7.136;DP=371;FS=11.398;HRun=6;HaplotypeScore=139.0574;InbreedingCoeff=0.4922;MQ=57.74;MQ0=2;MQRankSum=-2.156;QD=3.06;ReadPosRankSum=-1.695;VQSLOD=-0.4566;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:21,1:20:21.72:112,22,0	0/0:9,0:9:18:0,18,174	0/0:14,0:13:28.94:0,29,278	0/0:18,0:14:26.85:0,27,237	1/1:16,1:16:13.08:85,13,0	0/0:19,0:19:51.10:0,51,512	0/0:20,0:20:56.94:0,57,531	./.	0/0:33,0:33:87.07:0,87,841	0/1:16,0:12:9.03:43,0,9	1/1:19,0:14:1.08:38,1,0	1/1:15,0:15:5.88:49,6,0	1/1:11,0:11:9.77:43,10,0	0/1:17,0:17:2.24:30,0,2	./.	0/1:21,0:20:5.26:12,0,5	1/1:24,0:22:20.29:109,20,0	1/1:8,0:8:6.50:32,6,0	./.	./.	./.	0/1:17,0:14:1.02:102,0,1	1/1:22,0:16:15.18:119,15,0	1/1:10,0:10:10.04:52,10,0	1/1:16,1:16:5.13:63,5,0	0/1:16,1:17:15.96:41,0,16	./.	1/1:5,0:4:5.96:18,6,0
chr10	31650792	.	C	CGGGGTT	11096.23	PASS	AC=30;AF=0.714;AN=42;BaseQRankSum=11.451;DP=332;FS=1.030;HRun=0;HaplotypeScore=97.2352;InbreedingCoeff=0.9558;MQ=54.56;MQ0=2;MQRankSum=-10.198;QD=51.85;ReadPosRankSum=1.267;VQSLOD=5.0572;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,7:12:33.09:903,33,0	0/0:9,0:8:24.08:0,24,583	0/0:16,0:15:34.81:0,35,814	0/0:14,0:10:16.98:0,17,404	1/1:0,9:7:18.06:563,18,0	0/0:23,0:23:48.29:0,48,1554	0/0:19,0:19:57.13:0,57,1269	./.	0/0:35,0:35:99:0,102,2365	1/1:0,16:10:30.09:915,30,0	1/1:0,13:13:15.05:452,15,0	1/1:1,16:18:30.10:1055,30,0	1/1:1,9:11:17.57:633,18,0	1/1:4,10:14:36.04:1043,36,0	./.	1/1:0,20:22:45.15:1582,45,0	1/1:0,8:11:15.05:530,15,0	1/1:2,4:5:9.01:221,9,0	./.	./.	./.	1/1:0,12:10:15.05:527,15,0	1/1:0,18:13:21.03:652,21,0	1/1:1,3:5:9.03:252,9,0	1/1:3,10:11:33.09:1002,33,0	1/1:2,11:12:24.07:766,24,0	./.	./.
chr10	31650894	.	T	TG	5293.02	PASS	AB=0.591;AC=31;AF=0.705;AN=44;BaseQRankSum=6.099;DP=286;FS=6.299;HRun=1;HaplotypeScore=89.4737;InbreedingCoeff=0.8557;MQ=45.90;MQ0=5;MQRankSum=-5.147;QD=29.90;ReadPosRankSum=1.818;VQSLOD=4.3593;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,10:11:18.04:244,18,0	0/0:13,0:12:24.08:0,24,311	0/0:28,0:14:42.13:0,42,531	0/0:20,0:12:30.06:0,30,365	1/1:0,14:13:24.08:341,24,0	0/0:14,0:14:39.07:0,39,482	0/0:16,0:15:33.11:0,33,425	./.	0/0:17,0:17:39.08:0,39,488	1/1:4,9:13:33.09:435,33,0	1/1:0,9:7:21.07:301,21,0	1/1:2,9:10:30.03:372,30,0	1/1:0,12:12:35.13:440,35,0	1/1:0,13:13:36:468,36,0	./.	1/1:3,11:14:30.05:389,30,0	1/1:0,5:5:12.04:157,12,0	0/1:4,9:13:42.11:290,0,42	./.	./.	./.	1/1:1,9:8:15.05:219,15,0	1/1:0,10:9:27.09:388,27,0	1/1:1,8:9:21.07:296,21,0	1/1:1,13:12:24.08:345,24,0	1/1:0,15:13:39.13:545,39,0	./.	1/1:1,3:4:5.98:64,6,0
chr10	31651032	.	GTGGTTCCTGAAGAA	G	5403.84	PASS	AC=8;AF=0.182;AN=44;BaseQRankSum=4.874;DP=488;FS=0.000;HRun=0;HaplotypeScore=282.3730;InbreedingCoeff=0.9679;MQ=99.65;MQ0=0;MQRankSum=-9.134;QD=84.44;ReadPosRankSum=0.911;VQSLOD=3.6947;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,105,6244	1/1:0,2:2:6.02:251,6,0	0/0:38,0:38:99:0,102,5380	0/0:29,0:29:60.17:0,60,3054	0/0:28,0:28:75.26:0,75,4035	1/1:1,19:20:48.16:2011,48,0	1/1:3,21:24:30.10:1257,30,0	./.	1/1:0,18:18:45.15:1885,45,0	0/0:19,0:18:51.18:0,51,3088	0/0:25,0:25:75.25:0,75,4094	0/0:10,0:10:30.10:0,30,1629	0/0:19,0:19:54.19:0,54,3259	0/0:24,0:24:69.24:0,69,4192	./.	0/0:36,0:35:99:0,102,5922	0/0:19,0:19:51.18:0,51,3054	0/0:19,0:19:54.19:0,54,3242	./.	./.	./.	0/0:16,0:16:39.13:0,39,2352	0/0:17,0:17:45.14:0,45,2360	0/0:29,1:30:75.17:0,75,4446	0/0:23,0:23:69.17:0,69,4027	0/0:27,0:26:72.25:0,72,4247	./.	0/0:8,0:8:24.08:0,24,1347
chr10	31651321	.	GTAGGGCAGAGTC	G	3218.15	PASS	AB=0.985;AC=20;AF=0.455;AN=44;BaseQRankSum=16.233;DP=467;FS=0.374;HRun=0;HaplotypeScore=307.8624;InbreedingCoeff=-0.6497;MQ=88.26;MQ0=0;MQRankSum=-15.693;QD=8.09;ReadPosRankSum=7.043;VQSLOD=1.5053;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:25:99:211,0,183	0/0:13,0:13:36.12:0,36,2027	0/0:29,0:29:84.29:0,84,3796	0/0:27,0:26:72.21:0,72,3568	0/1:27,0:21:99:140,0,179	0/1:19,3:22:99:248,0,2735	0/1:23,1:24:41.72:42,0,3824	./.	0/1:28,3:32:99:360,0,4563	0/1:33,0:31:99:298,0,392	0/1:20,0:19:51.25:238,0,51	0/1:21,0:17:32.71:195,0,33	1/1:13,0:12:35.34:219,35,0	0/1:20,0:20:40.39:222,0,40	./.	0/1:15,0:15:40.07:148,0,40	0/1:16,0:15:96.42:96,0,137	0/1:18,0:18:99:100,0,316	./.	./.	./.	0/1:23,0:22:32.77:192,0,33	0/1:22,0:21:99:171,0,149	0/1:19,0:17:29.25:29,0,224	0/1:19,0:19:76.34:203,0,76	0/1:23,0:21:99:218,0,110	./.	0/1:3,0:3:27.24:27,0,41
chr10	31651326	.	GCAGAGTCTA	G	17723.15	PASS	AB=1.000;AC=34;AF=0.773;AN=44;BaseQRankSum=13.185;DP=447;FS=2.439;HRun=0;HaplotypeScore=199.7508;InbreedingCoeff=0.6928;MQ=94.10;MQ0=0;MQRankSum=-14.841;QD=50.35;ReadPosRankSum=3.997;VQSLOD=4.5410;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,23:25:48.16:1432,48,0	0/0:12,0:12:33.07:0,33,1479	0/0:31,0:31:74.91:0,75,2959	0/0:29,0:28:73.80:0,74,3115	1/1:4,19:21:30.10:919,30,0	0/1:20,0:20:84.13:84,0,2139	0/0:23,0:23:7.94:0,8,2789	./.	0/1:32,0:32:99:138,0,3654	1/1:4,25:27:69.21:2004,69,0	1/1:4,16:19:51.17:1506,51,0	1/1:1,19:16:39.13:1195,39,0	1/1:0,14:13:36.12:1102,36,0	1/1:1,18:19:45.15:1378,45,0	./.	1/1:3,12:15:30.10:918,30,0	1/1:4,11:14:21.07:642,21,0	1/1:5,13:18:30.06:812,30,0	./.	./.	./.	1/1:2,20:21:42.14:1225,42,0	1/1:3,18:20:45.14:1201,45,0	1/1:6,10:14:12:294,12,0	1/1:3,15:18:42.14:1286,42,0	1/1:1,18:17:48.15:1402,48,0	./.	1/1:1,2:3:6.49:185,6,0
chr10	31651942	.	TGGCTC	T	17288.56	PASS	AC=40;AF=0.769;AN=52;BaseQRankSum=11.739;DP=506;FS=4.599;HRun=0;HaplotypeScore=91.4173;InbreedingCoeff=0.8372;MQ=54.90;MQ0=20;MQRankSum=-5.276;QD=48.16;ReadPosRankSum=2.120;VQSLOD=5.1057;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,41:41:81.28:1805,81,0	0/0:13,0:8:18.06:0,18,581	0/0:25,0:1:2.88:0,3,15	0/0:24,0:4:6.02:0,6,120	1/1:4,28:30:63.22:1404,63,0	0/0:24,0:23:60.21:0,60,1895	0/0:33,0:32:60.21:0,60,1883	./.	0/0:23,0:23:63.20:0,63,1859	1/1:0,21:21:60.20:1272,60,0	1/1:1,19:19:42.14:935,42,0	1/1:2,22:24:60.16:1289,60,0	1/1:1,23:24:51.17:1136,51,0	1/1:0,16:16:39.13:869,39,0	./.	1/1:0,18:17:39.13:869,39,0	1/1:0,17:17:42.14:937,42,0	1/1:0,19:18:41.29:935,41,0	1/1:3,0:2:3:29,3,0	1/1:1,5:6:12.04:267,12,0	1/1:0,3:3:3.01:67,3,0	1/1:0,18:17:42.14:936,42,0	1/1:0,19:19:45.15:1003,45,0	1/1:0,18:18:27.09:602,27,0	1/1:1,12:12:27.09:602,27,0	1/1:3,32:32:90.30:1931,90,0	1/1:0,5:3:6.02:134,6,0	1/1:0,6:6:12.04:268,12,0
chr10	31652143	.	C	CT	4916.62	PASS	AB=1.000;AC=33;AF=0.750;AN=44;BaseQRankSum=-6.634;DP=370;FS=11.402;HRun=4;HaplotypeScore=64.8733;InbreedingCoeff=0.7931;MQ=76.86;MQ0=6;MQRankSum=-1.466;QD=18.41;ReadPosRankSum=3.562;VQSLOD=3.4413;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,20:26:45.10:560,45,0	0/0:14,0:6:14.94:0,15,154	0/0:38,1:19:23.68:0,24,237	0/1:45,0:19:14.77:15,0,154	1/1:9,16:19:41.19:529,41,0	0/0:16,0:15:27:0,27,256	0/0:15,0:13:18.16:0,18,171	./.	0/0:14,0:14:34.13:0,34,286	1/1:0,4:4:10.85:128,11,0	1/1:4,10:14:24.05:276,24,0	1/1:0,8:8:9.29:124,9,0	1/1:0,8:8:12.03:146,12,0	1/1:0,8:6:9.03:123,9,0	./.	1/1:3,15:14:26.59:302,27,0	1/1:2,21:23:51.13:666,51,0	1/1:2,16:17:30.10:407,30,0	./.	./.	./.	1/1:4,5:9:21.06:265,21,0	1/1:1,10:10:15.05:203,15,0	1/1:5,7:13:37.87:451,38,0	1/1:1,11:9:15.05:205,15,0	1/1:4,16:17:36.11:476,36,0	./.	1/1:1,3:4:3.01:41,3,0
chr10	31652148	.	C	CTT	843.61	PASS	AB=0.967;AC=14;AF=0.318;AN=44;BaseQRankSum=-2.997;DP=388;FS=4.501;HRun=13;HaplotypeScore=89.0765;InbreedingCoeff=0.3100;MQ=76.82;MQ0=7;MQRankSum=-1.898;QD=4.22;ReadPosRankSum=-3.260;VQSLOD=-0.5637;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:39.71:0,40,271	1/1:8,6:6:9.03:122,9,0	0/1:40,0:20:13.86:14,0,41	0/1:47,0:19:21.92:22,0,22	0/0:29,0:22:44.84:0,45,272	1/1:3,16:18:21.07:285,21,0	1/1:8,3:10:17.49:188,17,0	./.	1/1:6,4:14:25.98:265,26,0	0/0:7,0:7:5.37:0,5,37	0/0:14,0:14:10.76:0,11,94	0/0:9,0:9:11.78:0,12,85	0/1:10,0:9:13.37:24,0,13	0/0:9,0:7:7.99:0,8,35	./.	0/0:19,0:15:26:0,26,168	0/0:20,0:20:36.71:0,37,239	0/1:17,0:17:12.30:12,0,125	./.	./.	./.	0/0:11,0:11:23.66:0,24,166	0/1:10,1:11:39.27:39,0,63	0/1:13,0:13:29.91:30,0,129	0/0:13,0:9:17.31:0,17,105	0/0:22,0:19:26:0,26,196	./.	0/0:5,0:5:5.90:0,6,46
chr10	31652351	.	CAATCTAATCATTTG	C	46.02	PASS	AC=10;AF=0.455;AN=22;BaseQRankSum=3.971;DP=276;FS=3.693;HRun=0;HaplotypeScore=100.8941;InbreedingCoeff=0.7094;MQ=83.69;MQ0=13;MQRankSum=-0.592;QD=0.81;ReadPosRankSum=-2.500;VQSLOD=1.5572;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	0/0:12,0:12:36.12:0,36,2346	0/0:16,0:15:39.13:0,39,1977	0/0:26,0:26:60.17:0,60,2990	./.	0/0:31,0:24:72.25:0,72,4805	0/0:24,0:21:57.20:0,57,3265	./.	0/0:26,0:23:66.23:0,66,4495	1/1:0,8:1:3.01:46,3,0	1/1:6,20:10:2.97:20,3,0	./.	./.	./.	./.	1/1:5,6:5:2.97:20,3,0	1/1:6,0:6:3.45:23,3,0	1/1:4,2:4:5.96:44,6,0	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.
chr10	31652574	.	GA	G	5226.51	PASS	AC=32;AF=0.696;AN=46;BaseQRankSum=8.502;DP=389;FS=5.143;HRun=2;HaplotypeScore=67.8273;InbreedingCoeff=0.9181;MQ=40.71;MQ0=38;MQRankSum=-2.550;QD=20.02;ReadPosRankSum=1.383;VQSLOD=4.8953;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:1,27:23:60.19:761,60,0	0/0:6,0:6:18.06:0,18,269	0/0:17,0:2:5.99:0,6,66	0/0:23,0:4:6.02:0,6,89	1/1:5,21:9:24.08:307,24,0	0/0:21,0:13:30.08:0,30,428	0/0:27,0:17:39.13:0,39,583	0/0:4,0:2:6.02:0,6,90	0/0:27,0:15:42.10:0,42,603	1/1:3,19:10:27.09:348,27,0	1/1:1,15:10:27.09:350,27,0	1/1:0,13:8:21.07:272,21,0	1/1:0,14:7:18.06:229,18,0	1/1:0,8:5:15.05:193,15,0	./.	1/1:1,14:8:21.07:263,21,0	1/1:1,11:8:21.07:268,21,0	1/1:0,11:10:24.08:307,24,0	./.	./.	./.	1/1:0,25:11:30.10:385,30,0	1/1:0,12:6:18.06:233,18,0	1/1:0,10:6:12.04:151,12,0	1/1:0,22:14:39.13:501,39,0	1/1:1,14:10:30.10:386,30,0	./.	1/1:1,11:7:21.07:272,21,0
chr10	31652940	.	GC	G	2659.79	PASS	AC=8;AF=0.182;AN=44;BaseQRankSum=8.392;DP=449;FS=7.453;HRun=1;HaplotypeScore=54.2248;InbreedingCoeff=0.9951;MQ=70.93;MQ0=0;MQRankSum=-0.653;QD=35.94;ReadPosRankSum=-0.180;VQSLOD=3.2723;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,132,2083	1/1:0,6:6:15.05:210,15,0	0/0:18,0:18:47.37:0,47,693	0/0:12,0:12:36.11:0,36,521	0/0:20,0:18:54.18:0,54,863	1/1:0,22:22:63.21:881,63,0	1/1:0,23:23:60.20:839,60,0	./.	1/1:0,23:23:63.21:880,63,0	0/0:21,0:20:60.20:0,60,940	0/0:17,0:16:45.15:0,45,717	0/0:21,0:21:63.20:0,63,975	0/0:20,0:20:60.20:0,60,959	0/0:23,0:23:69.22:0,69,1080	./.	0/0:21,0:21:63.19:0,63,957	0/0:23,0:23:69.18:0,69,1050	0/0:10,0:10:30.10:0,30,472	./.	./.	./.	0/0:20,0:20:60.18:0,60,913	0/0:16,0:16:48.16:0,48,766	0/0:24,0:24:72.23:0,72,1122	0/0:16,0:15:42.14:0,42,667	0/0:29,0:29:87.30:0,87,1387	./.	0/0:19,0:19:57.18:0,57,886
chr10	31653052	.	GT	G	1501.11	PASS	AC=8;AF=0.182;AN=44;BaseQRankSum=7.682;DP=473;FS=0.000;HRun=7;HaplotypeScore=56.1710;InbreedingCoeff=0.9972;MQ=79.24;MQ0=0;MQRankSum=-0.848;QD=20.85;ReadPosRankSum=0.256;VQSLOD=2.8813;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,135,1670	1/1:1,8:9:18.04:184,18,0	0/0:19,0:19:48.06:0,48,540	0/0:17,0:17:27.60:0,28,456	0/0:28,0:28:78.24:0,78,961	1/1:2,19:21:45.10:459,45,0	1/1:2,23:25:57.13:582,57,0	./.	1/1:4,13:17:42.09:428,42,0	0/0:27,0:27:72.23:0,72,898	0/0:21,0:21:54.17:0,54,679	0/0:14,0:14:39.12:0,39,490	0/0:21,0:21:60.16:0,60,738	0/0:16,0:16:39.12:0,39,479	./.	0/0:18,0:18:51.16:0,51,642	0/0:28,0:28:78.22:0,78,955	0/0:13,0:13:36.10:0,36,438	./.	./.	./.	0/0:17,0:17:45.13:0,45,553	0/0:26,0:26:72.22:0,72,893	0/0:26,0:26:72.23:0,72,905	0/0:18,0:16:48.15:0,48,604	0/0:31,0:31:84.26:0,84,1045	./.	0/0:12,0:12:36.12:0,36,453
chr10	31653415	.	G	GT	1982.20	PASS	AC=8;AF=0.182;AN=44;BaseQRankSum=12.886;DP=482;FS=2.120;HRun=0;HaplotypeScore=80.3316;InbreedingCoeff=0.9998;MQ=89.65;MQ0=0;MQRankSum=-3.203;QD=24.17;ReadPosRankSum=0.728;VQSLOD=4.7343;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:84.28:0,84,1173	1/1:4,12:16:38.41:395,38,0	0/0:21,0:21:56.09:0,56,741	0/0:22,0:22:57.01:0,57,692	0/0:37,0:37:99:0,108,1490	1/1:6,25:31:84.14:847,84,0	1/1:1,12:13:35.97:339,36,0	./.	1/1:3,19:22:60:553,60,0	0/0:29,0:29:87.28:0,87,1189	0/0:17,0:17:51.17:0,51,705	0/0:20,0:20:60.20:0,60,832	0/0:21,0:21:63.18:0,63,840	0/0:18,0:18:54.18:0,54,755	./.	0/0:17,0:17:51.17:0,51,713	0/0:26,0:26:78.25:0,78,1072	0/0:18,0:18:54.09:0,54,692	./.	./.	./.	0/0:17,0:17:51.17:0,51,713	0/0:23,0:23:69.20:0,69,945	0/0:15,0:15:45.13:0,45,596	0/0:25,0:25:75.25:0,75,1049	0/0:35,0:35:99:0,99,1365	./.	0/0:11,0:11:30.08:0,30,382
chr10	31653416	.	A	ATG	3132.85	PASS	AC=8;AF=0.182;AN=44;BaseQRankSum=13.007;DP=485;FS=2.050;HRun=0;HaplotypeScore=90.3471;InbreedingCoeff=0.9993;MQ=88.93;MQ0=0;MQRankSum=-2.307;QD=36.43;ReadPosRankSum=-0.053;VQSLOD=5.2270;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:84.29:0,84,1361	1/1:3,14:17:24.21:617,24,0	0/0:21,0:21:48.04:0,48,865	0/0:23,0:23:57.14:0,57,869	0/0:37,0:37:99:0,108,1752	1/1:6,25:31:88.16:1251,88,0	1/1:1,12:13:39.09:528,39,0	./.	1/1:6,19:25:47.16:888,47,0	0/0:29,0:29:87.30:0,87,1418	0/0:17,0:17:51.17:0,51,823	0/0:20,0:20:60.20:0,60,979	0/0:20,0:20:60.19:0,60,947	0/0:18,0:18:54.18:0,54,881	./.	0/0:17,0:17:51.17:0,51,832	0/0:26,0:26:78.27:0,78,1260	0/0:17,0:17:51.17:0,51,817	./.	./.	./.	0/0:17,0:17:51.17:0,51,826	0/0:22,0:22:66.23:0,66,1077	0/0:15,0:15:45.15:0,45,728	0/0:25,0:25:75.26:0,75,1222	0/0:36,0:36:99:0,105,1640	./.	0/0:11,0:11:33.10:0,33,503
chr10	31655139	.	G	GA	13792.60	PASS	AC=40;AF=0.909;AN=44;BaseQRankSum=-6.443;DP=404;FS=15.255;HRun=3;HaplotypeScore=51.6883;InbreedingCoeff=0.8843;MQ=81.06;MQ0=0;MQRankSum=-7.937;QD=37.28;ReadPosRankSum=4.926;VQSLOD=3.4077;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,14:17:39.13:546,39,0	1/1:1,3:4:3.01:42,3,0	0/0:23,0:22:12.32:0,12,440	0/0:11,0:11:27.08:0,27,324	1/1:0,42:42:99:1697,123,0	1/1:1,23:24:66.22:924,66,0	1/1:2,17:19:51.17:714,51,0	./.	1/1:1,18:19:48.16:672,48,0	1/1:2,27:29:75.24:1033,75,0	1/1:1,22:23:63.21:882,63,0	1/1:0,15:15:45.15:630,45,0	1/1:1,12:13:30.10:420,30,0	1/1:1,10:11:30.10:420,30,0	./.	1/1:0,14:14:36.12:504,36,0	1/1:3,23:26:66.22:920,66,0	1/1:1,18:19:45.15:629,45,0	./.	./.	./.	1/1:1,14:15:42.14:588,42,0	1/1:0,31:31:87.27:1217,87,0	1/1:3,9:12:33.10:446,33,0	1/1:0,15:15:45.15:630,45,0	1/1:1,17:18:51.17:709,51,0	./.	1/1:0,4:4:12.04:168,12,0
chr10	31655905	.	T	TG	3156.59	PASS	AC=40;AF=0.909;AN=44;BaseQRankSum=2.816;DP=264;FS=0.000;HRun=1;HaplotypeScore=35.1048;InbreedingCoeff=0.5754;MQ=79.48;MQ0=76;MQRankSum=-6.275;QD=14.28;ReadPosRankSum=3.879;VQSLOD=2.9503;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,14:11:30.10:430,30,0	1/1:0,10:4:8.90:127,9,0	0/0:24,0:24:69.18:0,69,901	0/0:19,0:19:48.14:0,48,638	1/1:0,11:7:18.04:237,18,0	1/1:0,7:2:6.02:85,6,0	1/1:2,9:5:11.63:152,12,0	./.	1/1:2,15:6:6.02:86,6,0	1/1:1,15:7:21.04:285,21,0	1/1:1,10:7:18.04:236,18,0	1/1:1,12:3:9.03:130,9,0	1/1:0,14:4:12.04:171,12,0	1/1:0,13:6:12.04:166,12,0	./.	1/1:1,9:7:8.04:122,8,0	1/1:0,4:3:6.02:86,6,0	1/1:0,9:6:6.02:84,6,0	./.	./.	./.	1/1:0,15:10:27.09:377,27,0	1/1:0,11:7:6.02:86,6,0	1/1:2,5:5:9.01:128,9,0	1/1:0,7:2:3.01:43,3,0	1/1:0,11:2:6.02:86,6,0	./.	1/1:0,6:4:12.04:165,12,0
chr10	31656733	.	G	GAACAAT	26829.35	PASS	AC=40;AF=0.909;AN=44;BaseQRankSum=-7.480;DP=402;FS=10.138;HRun=0;HaplotypeScore=96.9200;InbreedingCoeff=0.9741;MQ=102.13;MQ0=0;MQRankSum=-11.522;QD=77.77;ReadPosRankSum=4.978;VQSLOD=5.3562;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,11:18:33.07:956,33,0	1/1:2,3:5:15.05:519,15,0	0/0:32,0:32:93.29:0,93,2025	0/0:25,0:25:66.12:0,66,1360	1/1:1,17:19:51.14:1432,51,0	1/1:2,18:23:57.20:2024,57,0	1/1:6,13:20:54.19:1789,54,0	./.	1/1:5,21:27:69.24:2393,69,0	1/1:10,13:26:69.17:2065,69,0	1/1:4,9:15:24.08:738,24,0	1/1:2,14:17:45.09:1505,45,0	1/1:4,12:17:39.13:1287,39,0	1/1:1,17:21:57.15:1922,57,0	./.	1/1:9,26:39:81.28:2793,81,0	1/1:5,8:15:27.05:872,27,0	1/1:1,6:7:21.07:681,21,0	./.	./.	./.	1/1:3,6:9:24.04:763,24,0	1/1:5,9:14:30.10:1009,30,0	1/1:7,5:14:17.90:639,18,0	1/1:2,9:11:33.11:1085,33,0	1/1:1,16:20:57.16:1823,57,0	./.	1/1:0,7:7:15.05:533,15,0
chr10	31657052	.	TCTGC	T	258.37	PASS	AB=0.983;AC=11;AF=0.367;AN=30;BaseQRankSum=6.264;DP=305;FS=22.904;HRun=0;HaplotypeScore=97.3655;InbreedingCoeff=-0.4093;MQ=27.73;MQ0=118;MQRankSum=-5.266;QD=1.08;ReadPosRankSum=2.702;VQSLOD=0.2849;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:10,0:5:3.01:32,3,0	0/0:3,0:1:3.01:0,3,42	./.	./.	./.	./.	0/1:31,1:12:22.05:22,0,272	./.	0/0:16,0:14:9.20:0,9,420	0/0:6,0:3:2.96:0,3,19	./.	0/1:29,0:11:51.89:52,0,270	0/1:14,1:8:64.85:65,0,103	0/1:29,1:16:21.01:21,0,244	./.	0/1:22,0:10:1.52:2,0,88	0/1:29,1:21:45.56:46,0,393	0/1:26,0:17:66.65:67,0,216	./.	./.	./.	./.	./.	0/1:38,0:24:26.20:26,0,463	0/0:12,0:2:0:0,0,0	0/1:8,0:2:20.84:30,0,21	./.	0/0:9,0:2:6.02:0,6,84
chr10	31657058	.	TCTG	T	496.08	PASS	AB=0.939;AC=11;AF=0.367;AN=30;BaseQRankSum=7.575;DP=307;FS=35.427;HRun=0;HaplotypeScore=95.7079;InbreedingCoeff=-0.1987;MQ=25.30;MQ0=137;MQRankSum=-5.121;QD=2.41;ReadPosRankSum=4.208;VQSLOD=0.0800;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:12,0:5:3.62:11,4,0	./.	./.	./.	0/0:5,0:1:0:0,0,0	./.	0/0:30,1:12:12.81:0,13,279	./.	0/0:13,0:11:21.85:0,22,468	0/0:5,0:1:0.89:0,1,2	./.	0/1:28,1:12:25.82:26,0,279	0/1:13,1:6:30.32:30,0,90	0/1:24,2:15:87.97:88,0,237	./.	0/1:20,2:10:55.50:55,0,72	0/1:28,1:19:99:119,0,397	0/1:24,0:14:99:187,0,194	./.	./.	./.	./.	./.	0/1:35,1:22:43.60:44,0,501	0/0:9,1:1:0:0,0,0	1/1:9,0:1:3.01:40,3,0	./.	0/0:10,0:2:6.02:0,6,98
chr10	31657063	.	CTCT	C	230.17	PASS	AB=0.970;AC=9;AF=0.281;AN=32;BaseQRankSum=5.684;DP=316;FS=20.624;HRun=0;HaplotypeScore=92.3691;InbreedingCoeff=-0.1606;MQ=24.69;MQ0=148;MQRankSum=-3.196;QD=1.19;ReadPosRankSum=4.088;VQSLOD=0.0143;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:4:4.66:0,5,19	./.	./.	./.	0/0:4,1:1:0:0,0,0	0/0:7,0:1:3.01:0,3,45	0/0:31,0:13:22.82:0,23,314	./.	0/0:15,0:11:24.36:0,24,404	0/0:5,0:1:0.89:0,1,2	./.	0/1:30,0:12:23.63:24,0,322	0/1:13,1:6:41.53:42,0,92	0/1:27,1:15:2.66:3,0,221	./.	0/1:23,1:9:6.58:7,0,132	0/1:28,0:19:77.82:78,0,379	0/1:23,1:14:74.59:75,0,210	./.	./.	./.	./.	./.	0/1:35,1:20:55.02:55,0,396	0/0:11,1:1:0.89:0,1,2	1/1:9,1:1:3.01:51,3,0	./.	0/0:10,0:2:6.02:0,6,100
chr10	31657070	.	TCTG	T	692.32	PASS	AB=0.938;AC=11;AF=0.344;AN=32;BaseQRankSum=7.038;DP=336;FS=32.750;HRun=0;HaplotypeScore=83.7035;InbreedingCoeff=-0.2023;MQ=22.42;MQ0=168;MQRankSum=-3.578;QD=3.27;ReadPosRankSum=5.823;VQSLOD=-0.0559;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:14,1:5:3.48:53,3,0	0/0:1,0:1:3.01:0,3,45	./.	./.	0/0:6,1:1:0:0,0,0	0/0:7,0:2:4.83:0,5,50	0/0:33,0:16:31.84:0,32,439	./.	0/0:11,0:8:14.14:0,14,322	0/0:8,1:1:3.01:0,3,50	./.	0/1:29,2:11:31.75:32,0,314	0/1:13,1:6:52.79:53,0,64	0/1:25,1:13:99:109,0,124	./.	0/1:24,0:8:27.23:27,0,104	0/1:26,3:18:99:173,0,169	0/1:24,1:14:99:249,0,146	./.	./.	./.	./.	./.	0/1:33,1:18:57.68:58,0,367	0/0:11,2:2:1.82:0,2,5	1/1:10,1:1:3.01:48,3,0	./.	./.
chr10	31657076	.	TCTGC	T	628.48	PASS	AB=0.929;AC=10;AF=0.294;AN=34;BaseQRankSum=5.112;DP=368;FS=11.237;HRun=0;HaplotypeScore=97.9452;InbreedingCoeff=-0.2643;MQ=21.38;MQ0=187;MQRankSum=-1.993;QD=3.21;ReadPosRankSum=4.212;VQSLOD=0.9936;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:14,1:5:38.12:50,0,38	0/0:1,0:1:3.01:0,3,42	./.	./.	0/0:9,0:2:2.68:0,3,11	0/0:9,0:3:6:0,6,65	0/0:34,0:19:44.71:0,45,570	./.	0/0:12,0:9:21.68:0,22,335	0/0:19,0:2:6.02:0,6,89	./.	0/1:28,1:12:98.79:99,0,151	0/1:16,1:7:49.81:84,0,50	0/1:24,3:13:99:136,0,153	./.	0/1:23,3:9:99:129,0,110	0/1:25,2:15:99:175,0,139	0/1:22,1:12:58.79:59,0,226	./.	./.	./.	./.	0/1:14,0:2:0:0,0,0	0/0:32,1:18:2.53:0,3,236	0/0:15,0:5:3.01:0,3,43	1/1:13,0:1:1.25:3,1,0	./.	./.
chr10	31657100	.	TCTG	T	503.07	PASS	AB=0.916;AC=9;AF=0.214;AN=42;BaseQRankSum=5.113;DP=481;FS=4.839;HRun=0;HaplotypeScore=106.9091;InbreedingCoeff=-0.0877;MQ=33.13;MQ0=194;MQRankSum=-2.161;QD=2.54;ReadPosRankSum=1.951;VQSLOD=1.1513;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:21,2:10:1.72:99,2,0	0/0:3,0:3:9.03:0,9,125	0/0:10,0:4:8.39:0,8,89	0/0:17,0:7:7.08:0,7,202	0/0:14,0:5:3.01:0,3,45	0/0:12,0:6:12.04:0,12,171	0/0:42,0:30:59.82:0,60,1009	./.	0/0:15,0:13:30.57:0,31,447	0/0:36,0:19:29.88:0,30,366	./.	0/0:31,1:10:6.97:0,7,155	0/1:14,3:8:36.28:92,0,36	0/1:28,2:14:31.96:69,0,32	./.	0/1:28,2:12:34.39:34,0,161	0/1:23,3:15:38.38:147,0,38	0/1:19,3:12:72.83:153,0,73	./.	./.	./.	0/0:27,0:11:3.72:0,4,13	0/1:20,0:7:0:0,0,0	0/1:27,2:13:18.23:24,0,18	0/0:20,1:9:4.54:0,5,24	0/0:26,0:13:20.84:0,21,212	./.	0/0:6,0:1:3.01:0,3,40
chr10	31657109	.	GCCT	G	575.66	PASS	AB=0.830;AC=14;AF=0.333;AN=42;BaseQRankSum=2.586;DP=413;FS=12.139;HRun=0;HaplotypeScore=106.4548;InbreedingCoeff=0.0912;MQ=39.32;MQ0=98;MQRankSum=-1.533;QD=2.38;ReadPosRankSum=-1.908;VQSLOD=1.2125;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:11,6:11:10.45:0,10,72	0/0:5,0:5:15.05:0,15,225	0/0:16,0:6:17.74:0,18,217	0/0:22,0:12:35.15:0,35,527	1/1:7,2:5:6.02:97,6,0	0/0:7,0:6:7.93:0,8,145	0/0:38,0:34:47.70:0,48,1177	./.	0/0:16,0:15:38.80:0,39,632	0/1:27,0:21:69.79:70,0,147	./.	0/1:21,6:14:29.16:29,0,55	0/0:12,2:7:11.58:0,12,139	0/1:19,6:17:59.57:62,0,60	./.	0/0:18,4:13:12.87:0,13,164	0/1:15,8:16:87.10:87,0,174	0/1:12,8:12:34.41:34,0,98	./.	./.	./.	0/1:21,2:16:0.01:0,0,0	1/1:5,9:8:8.82:146,9,0	0/1:18,9:15:33.65:42,0,34	1/1:8,15:15:6.84:69,7,0	0/1:21,3:16:78.82:79,0,105	./.	0/0:1,0:1:3.01:0,3,41
chr10	31657114	.	CTCTGCCTCTGCCTCT	C	2432.63	PASS	AB=0.926;AC=21;AF=0.477;AN=44;BaseQRankSum=3.140;DP=387;FS=0.000;HRun=0;HaplotypeScore=158.3991;InbreedingCoeff=0.1482;MQ=43.06;MQ0=51;MQRankSum=0.966;QD=9.01;ReadPosRankSum=-4.707;VQSLOD=0.9626;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:14,0:12:8.51:136,0,9	0/0:7,0:7:18.02:0,18,369	0/0:16,0:6:17.98:0,18,328	0/0:23,0:13:31.72:0,32,764	1/1:4,4:6:11.96:176,12,0	0/0:7,0:7:11.97:0,12,216	0/0:41,0:40:91.75:0,92,1861	./.	0/0:17,0:17:45.01:0,45,944	0/1:12,10:19:97.32:204,0,97	1/1:7,0:6:6:51,6,0	0/1:24,0:13:18.47:18,0,74	0/1:11,0:7:39.24:110,0,39	0/1:21,0:15:28.41:171,0,28	./.	0/1:20,0:15:88.69:89,0,102	0/1:20,0:14:19.43:292,0,19	1/1:19,0:15:24:466,24,0	./.	./.	./.	0/1:8,10:17:0:0,0,1	1/1:11,0:9:14.71:249,15,0	0/1:23,0:14:22.67:118,0,23	1/1:26,0:19:23.85:229,24,0	1/1:12,14:20:1.46:279,1,0	./.	0/0:1,0:1:3.01:0,3,44
chr10	31658285	.	A	AT	12912.61	PASS	AC=40;AF=0.909;AN=44;BaseQRankSum=-0.590;DP=410;FS=14.763;HRun=4;HaplotypeScore=77.1955;InbreedingCoeff=0.9940;MQ=85.26;MQ0=0;MQRankSum=-8.328;QD=34.16;ReadPosRankSum=5.906;VQSLOD=3.5831;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,29:29:78.26:1064,78,0	1/1:0,6:6:18.06:246,18,0	0/0:20,0:20:42.97:0,43,496	0/0:12,0:12:30.08:0,30,339	1/1:3,25:28:66.13:856,66,0	1/1:3,25:28:66.22:903,66,0	1/1:1,23:24:63.21:862,63,0	./.	1/1:0,18:18:48.16:656,48,0	1/1:2,14:16:42.14:574,42,0	1/1:1,12:13:33.11:450,33,0	1/1:1,19:20:39.13:533,39,0	1/1:0,13:13:36.12:492,36,0	1/1:0,18:18:45.15:615,45,0	./.	1/1:3,14:16:36.12:492,36,0	1/1:2,21:23:63.21:862,63,0	1/1:0,8:8:24.08:328,24,0	./.	./.	./.	1/1:3,16:19:45.15:615,45,0	1/1:1,25:26:62.90:840,63,0	1/1:2,15:17:39.13:533,39,0	1/1:1,21:22:60.20:821,60,0	1/1:3,15:18:48.15:638,48,0	./.	1/1:1,14:15:39.13:533,39,0
chr10	31658432	.	CAT	C	3220.27	PASS	AB=0.986;AC=35;AF=0.761;AN=46;BaseQRankSum=-0.691;DP=316;FS=6.560;HRun=0;HaplotypeScore=65.2889;InbreedingCoeff=0.3620;MQ=58.13;MQ0=14;MQRankSum=1.690;QD=12.15;ReadPosRankSum=0.985;VQSLOD=2.7129;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:28:35.92:306,36,0	1/1:4,0:4:11.99:117,12,0	0/0:28,0:25:56.36:0,56,564	0/0:15,0:10:29.93:0,30,289	1/1:15,0:15:5.57:191,6,0	1/1:14,0:13:26.96:239,27,0	1/1:16,1:15:30.88:291,31,0	./.	1/1:15,0:15:26.85:297,27,0	1/1:19,0:18:14.92:318,15,0	0/1:12,1:12:5.21:137,0,5	1/1:13,1:14:14.79:137,15,0	1/1:11,0:11:13.58:155,14,0	0/1:12,0:11:9.68:10,0,26	./.	1/1:14,0:13:7.60:152,8,0	0/1:12,0:8:5.53:6,0,56	0/1:6,0:5:8.59:9,0,34	0/0:2,0:1:3:0,3,26	./.	./.	0/1:16,0:16:8.17:80,0,8	1/1:8,0:8:15:165,15,0	1/1:20,2:22:38.93:372,39,0	1/1:7,0:7:9:94,9,0	1/1:13,0:13:3.14:192,3,0	./.	1/1:4,1:5:11.80:101,12,0
chr10	31658568	.	AT	A	6269.80	PASS	AC=40;AF=0.909;AN=44;BaseQRankSum=-3.020;DP=364;FS=10.273;HRun=10;HaplotypeScore=77.3968;InbreedingCoeff=0.8694;MQ=64.01;MQ0=7;MQRankSum=-1.956;QD=20.16;ReadPosRankSum=4.880;VQSLOD=5.2008;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,23:28:35.73:530,36,0	1/1:2,1:3:3:26,3,0	0/0:23,0:12:18.52:0,19,195	0/0:28,1:19:9.28:0,9,294	1/1:2,20:22:53.98:469,54,0	1/1:0,18:17:41.99:365,42,0	1/1:2,17:19:35.99:312,36,0	./.	1/1:1,15:16:41.95:358,42,0	1/1:1,14:15:38.98:335,39,0	1/1:3,12:14:32.97:286,33,0	1/1:1,11:10:17.64:156,18,0	1/1:2,6:7:18:156,18,0	1/1:3,8:10:26.86:223,27,0	./.	1/1:1,10:10:26.99:234,27,0	1/1:2,16:18:50.90:433,51,0	1/1:0,9:9:21:182,21,0	./.	./.	./.	1/1:2,8:10:23.98:208,24,0	1/1:2,10:12:32.99:286,33,0	1/1:3,27:30:65.70:546,66,0	1/1:1,13:14:35.93:305,36,0	1/1:1,19:19:47.97:416,48,0	./.	1/1:1,19:20:50.99:443,51,0
chr10	31659030	.	CAGAAAGGAGTCTAG	C	489	PASS	AB=0.771;AC=2;AF=0.045;AN=44;BaseQRankSum=4.110;DP=218;FS=12.038;HRun=0;HaplotypeScore=118.5426;InbreedingCoeff=-0.0607;MQ=75.19;MQ0=0;MQRankSum=-2.441;QD=24.45;ReadPosRankSum=0.011;VQSLOD=1.9450;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:39.13:0,39,2499	0/0:4,0:4:12.04:0,12,848	0/0:9,0:9:27.09:0,27,1764	0/0:14,0:12:29.30:0,29,1334	0/0:15,0:15:36.12:0,36,2094	0/1:12,2:14:99:217,0,2219	0/0:13,1:12:24.08:0,24,1541	./.	0/1:3,3:6:99:359,0,606	0/0:13,0:13:39.13:0,39,2430	0/0:12,0:12:33.11:0,33,2056	0/0:12,0:12:33.11:0,33,2249	0/0:5,0:5:15.05:0,15,1048	0/0:7,0:7:15.05:0,15,893	./.	0/0:10,0:10:30.10:0,30,2022	0/0:17,0:17:48.16:0,48,3098	0/0:15,0:15:42.14:0,42,2676	./.	./.	./.	0/0:7,0:7:18.05:0,18,1003	0/0:2,0:2:6.02:0,6,270	0/0:4,0:4:9.03:0,9,622	0/0:8,0:8:24.08:0,24,1432	0/0:11,0:11:30.10:0,30,1964	./.	0/0:4,0:4:12.04:0,12,846
chr10	31659057	.	TTTC	T	104.11	PASS	AB=0.953;AC=12;AF=0.273;AN=44;BaseQRankSum=0.716;DP=230;FS=22.490;HRun=0;HaplotypeScore=57.9463;InbreedingCoeff=-0.2738;MQ=74.14;MQ0=7;MQRankSum=0.871;QD=0.71;ReadPosRankSum=3.222;VQSLOD=0.0958;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:13:14.23:0,14,159	0/0:5,0:5:10.98:0,11,57	0/1:23,0:10:4.01:4,0,45	0/1:20,0:8:19.92:20,0,30	0/1:14,0:13:19.58:20,0,111	0/1:16,1:16:19.43:19,0,156	0/0:17,0:16:27.95:0,28,165	./.	0/0:9,0:8:3.28:0,3,33	0/0:10,0:9:1.83:0,2,125	0/0:8,0:8:18.31:0,18,144	0/1:7,2:9:71.23:84,0,71	0/0:4,0:4:8.94:0,9,83	0/0:7,0:7:6.41:0,6,132	./.	0/1:13,1:13:14.79:15,0,162	0/1:17,0:16:5.31:5,0,149	0/1:15,0:15:13.59:14,0,105	./.	./.	./.	0/0:3,0:3:8.32:0,8,51	0/0:1,0:1:2.84:0,3,14	1/1:3,0:3:2.74:12,3,0	0/0:4,0:4:1.11:0,1,75	0/1:8,2:10:21.49:21,0,83	./.	0/1:4,0:4:13.99:14,0,17
chr10	31659483	.	T	TG	7094.08	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-4.527;DP=640;FS=13.876;HRun=2;HaplotypeScore=64.9313;InbreedingCoeff=0.9908;MQ=57.80;MQ0=10;MQRankSum=-4.035;QD=34.44;ReadPosRankSum=0.755;VQSLOD=3.8191;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:35:90.28:0,90,1115	1/1:0,4:4:9.03:130,9,0	0/0:20,0:12:35.89:0,36,405	0/0:23,0:16:48.15:0,48,592	0/0:18,0:18:45.14:0,45,556	1/1:0,19:17:42.14:604,42,0	1/1:0,20:19:54.18:777,54,0	1/1:2,24:21:24.22:783,24,0	1/1:1,19:18:48.16:682,48,0	0/0:26,0:26:72.14:0,72,858	0/0:14,0:14:39.12:0,39,480	0/0:26,0:26:78.20:0,78,949	0/0:28,0:28:81.22:0,81,972	0/0:30,0:29:81.25:0,81,999	1/1:1,20:17:51.17:733,51,0	0/0:20,0:20:51.16:0,51,632	0/0:38,0:38:99:0,111,1375	0/0:25,0:24:72.23:0,72,889	1/1:3,19:20:54.18:777,54,0	1/1:1,23:20:57.18:805,57,0	1/1:3,24:24:66.22:950,66,0	0/0:27,0:27:72.23:0,72,892	0/0:24,0:24:69.20:0,69,843	0/0:29,0:28:78.24:0,78,965	0/0:20,0:19:45.14:0,45,556	0/0:21,0:19:54.16:0,54,657	1/1:2,21:20:60.20:852,60,0	0/0:9,0:9:27.08:0,27,335
chr10	31661687	.	AG	A	139.64	PASS	AB=0.686;AC=1;AF=0.018;AN=56;BaseQRankSum=1.751;DP=672;FS=5.022;HRun=1;HaplotypeScore=164.4668;InbreedingCoeff=-0.0219;MQ=43.58;MQ0=80;MQRankSum=-1.279;QD=5.82;ReadPosRankSum=0.260;VQSLOD=0.4695;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:34:45.61:0,46,564	0/0:10,0:10:15.62:0,16,177	0/0:15,0:3:9.02:0,9,98	0/0:31,0:5:8.99:0,9,113	0/0:32,0:24:18.94:0,19,230	0/0:29,0:29:43.69:0,44,573	0/0:20,0:19:29.96:0,30,389	0/0:28,0:25:59.03:0,59,637	0/0:29,0:29:51.63:0,52,671	0/0:29,0:23:66.20:0,66,804	0/0:20,0:19:23.26:0,23,210	0/0:34,0:28:26.52:0,27,252	0/0:20,0:18:17.34:0,17,218	0/0:25,0:20:20.95:0,21,221	0/1:13,11:21:23.41:214,0,23	0/0:26,0:21:25.20:0,25,266	0/0:17,0:12:10.80:0,11,118	0/0:13,0:10:19.91:0,20,204	0/0:12,0:11:32.47:0,32,388	0/0:32,0:27:30.60:0,31,347	0/0:21,0:15:19.12:0,19,198	0/0:18,0:15:9.03:0,9,114	0/0:23,0:20:22.83:0,23,249	0/0:31,0:26:39.42:0,39,485	0/0:26,0:22:33.63:0,34,360	0/0:20,0:16:43.68:0,44,516	0/0:29,0:26:31.56:0,32,328	0/0:15,0:12:26.14:0,26,292
chr10	31661690	.	GAGAGAGAGAGAGAGAGA	G	2957.56	PASS	AB=0.992;AC=25;AF=0.446;AN=56;BaseQRankSum=4.977;DP=678;FS=2.366;HRun=0;HaplotypeScore=251.5793;InbreedingCoeff=-0.3552;MQ=43.38;MQ0=81;MQRankSum=-2.387;QD=5.61;ReadPosRankSum=-1.022;VQSLOD=2.6088;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:43,0:34:72.18:72,0,310	0/0:11,0:11:15.04:0,15,747	0/0:15,0:3:6.02:0,6,79	0/0:31,0:6:7.81:0,8,105	0/1:31,0:23:76.34:76,0,167	0/0:30,0:30:36.11:0,36,1673	0/1:20,0:19:3.31:3,0,483	0/1:28,0:26:59.81:60,0,149	0/0:32,0:32:33.11:0,33,1814	0/0:30,0:26:34.99:0,35,604	0/1:17,0:17:33.77:227,0,34	0/1:34,0:28:99:220,0,104	0/1:18,0:17:99:145,0,113	0/1:24,0:19:28.34:199,0,28	1/1:21,4:22:19:572,19,0	0/1:27,0:22:7.25:249,0,7	0/1:17,0:12:52.21:73,0,52	0/1:12,0:10:56.82:78,0,57	0/1:14,0:13:6.16:6,0,151	1/1:31,0:26:18.99:440,19,0	1/1:22,0:16:15.59:87,16,0	0/1:19,0:16:38.52:55,0,39	0/1:23,0:22:62.57:63,0,83	0/1:31,0:27:50.13:50,0,86	0/1:24,0:20:99:137,0,109	0/1:21,0:17:32.77:33,0,187	0/1:26,0:24:99:248,0,194	0/1:12,0:9:33.30:33,0,34
chr10	31661692	.	GA	G	606.19	PASS	AB=0.970;AC=17;AF=0.304;AN=56;BaseQRankSum=4.446;DP=671;FS=1.106;HRun=1;HaplotypeScore=159.7888;InbreedingCoeff=-0.3235;MQ=44.67;MQ0=79;MQRankSum=-5.390;QD=1.59;ReadPosRankSum=3.888;VQSLOD=-0.6831;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:40,1:34:24.11:0,24,505	0/0:12,0:12:15.20:0,15,176	0/0:15,0:3:9.03:0,9,107	0/0:32,0:9:18.80:0,19,206	0/0:25,2:22:7.33:0,7,214	0/0:30,0:30:40.67:0,41,536	0/0:20,0:19:30.08:0,30,376	0/1:29,0:27:43.01:43,0,501	0/0:32,0:32:51.59:0,52,648	0/1:27,2:24:15.48:15,0,569	0/1:20,0:19:18.72:19,0,76	0/1:33,1:28:69.18:69,0,100	0/1:17,2:17:49.61:105,0,50	0/1:19,2:18:36.18:36,0,76	0/0:24,0:21:9.77:0,10,167	1/1:26,0:22:5.67:103,6,0	0/1:17,0:12:47.02:47,0,61	0/1:12,0:10:31.47:31,0,128	0/0:13,0:13:5.42:0,5,348	0/1:28,0:26:37.83:38,0,155	0/1:22,1:18:10.63:11,0,134	0/0:17,1:15:9.03:0,9,114	0/1:25,0:22:18.57:19,0,169	0/1:27,1:25:85.69:96,0,86	0/1:23,0:19:44.31:44,0,123	0/0:18,1:15:8.27:0,8,421	0/1:23,2:23:73.74:74,0,159	0/1:9,0:8:14.73:15,0,65
chr10	31661693	.	AG	A	1817.63	PASS	AB=0.851;AC=22;AF=0.393;AN=56;BaseQRankSum=3.732;DP=675;FS=2.434;HRun=1;HaplotypeScore=156.9271;InbreedingCoeff=-0.5020;MQ=44.68;MQ0=79;MQRankSum=-7.148;QD=3.52;ReadPosRankSum=2.567;VQSLOD=0.4344;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:35,9:35:28.20:28,0,447	0/0:11,0:11:14.26:0,14,175	0/0:15,0:2:6.02:0,6,75	0/0:34,0:10:21.88:0,22,249	0/1:24,6:22:11.34:11,0,206	0/0:30,0:30:40.67:0,41,535	0/0:19,0:18:26.95:0,27,351	0/1:27,1:25:70.04:70,0,499	0/0:32,0:32:48.59:0,49,605	0/1:28,1:24:11.81:12,0,569	0/1:15,5:19:56.23:84,0,56	0/1:27,8:29:89.69:192,0,90	0/1:13,6:17:49.20:186,0,49	0/1:19,3:17:58.55:85,0,59	0/1:24,0:21:7.92:8,0,110	1/1:18,10:23:23.18:227,23,0	0/1:12,5:12:60.50:93,0,60	0/1:10,3:10:90.92:91,0,128	0/1:13,2:14:41.14:41,0,377	0/1:25,6:26:99:120,0,155	0/1:22,2:18:29.51:30,0,134	0/0:17,1:15:9.02:0,9,105	0/1:20,5:22:70.73:71,0,166	0/1:21,9:25:81.16:235,0,81	0/1:14,10:20:99:177,0,122	0/1:17,3:16:30.31:30,0,420	0/1:23,5:25:99:133,0,150	0/1:9,1:7:57.06:57,0,64
chr10	31661694	.	GAGAGAGAGAGAGA	G	5673.30	PASS	AB=0.996;AC=37;AF=0.661;AN=56;BaseQRankSum=3.929;DP=682;FS=11.884;HRun=0;HaplotypeScore=210.0213;InbreedingCoeff=0.2125;MQ=44.45;MQ0=80;MQRankSum=0.396;QD=10.15;ReadPosRankSum=0.746;VQSLOD=2.9171;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:45,0:36:2.49:240,0,2	0/0:11,0:11:12.04:0,12,518	0/0:16,0:2:6.02:0,6,79	0/0:34,0:10:4.14:0,4,246	1/1:30,0:22:19.87:202,20,0	0/0:31,0:31:28.17:0,28,1064	0/1:19,0:18:19.45:19,0,255	0/1:27,0:24:22.34:75,0,22	0/0:31,0:31:30.10:0,30,1251	0/1:29,0:24:7.88:8,0,136	1/1:20,1:20:26.68:434,27,0	1/1:35,1:30:15.42:469,15,0	0/1:19,0:17:18.74:344,0,19	1/1:21,2:18:2.38:312,2,0	1/1:24,0:21:18.27:451,18,0	1/1:26,2:23:17.71:416,18,0	0/1:17,0:12:22.28:194,0,22	1/1:13,0:10:8.72:209,9,0	0/1:15,0:14:25.96:26,0,74	1/1:30,2:27:41.41:647,41,0	1/1:24,0:18:18.49:118,18,0	1/1:19,0:16:20.99:111,21,0	1/1:25,0:22:15.66:239,16,0	1/1:27,2:24:12.59:150,13,0	1/1:24,0:20:14.94:367,15,0	0/1:21,0:17:21.15:168,0,21	0/1:28,1:26:13.91:385,0,14	1/1:10,0:7:4.04:89,4,0
chr10	31661696	.	GAGAGAGAGAGA	G	5711.44	PASS	AB=0.955;AC=39;AF=0.696;AN=56;BaseQRankSum=4.100;DP=689;FS=12.249;HRun=0;HaplotypeScore=197.2286;InbreedingCoeff=0.3293;MQ=44.30;MQ0=79;MQRankSum=0.855;QD=10.11;ReadPosRankSum=1.553;VQSLOD=2.9967;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:42,3:36:20.77:278,21,0	0/0:11,0:11:12.04:0,12,426	0/0:19,0:2:6.02:0,6,79	0/0:31,0:10:13.93:0,14,257	1/1:27,3:22:23.31:224,23,0	0/0:32,0:32:24.65:0,25,881	0/1:19,0:18:20.10:20,0,148	0/1:28,0:25:34.33:74,0,34	0/0:31,0:31:30.10:0,30,995	0/1:30,0:25:33.12:33,0,143	1/1:18,4:21:28.02:435,28,0	1/1:31,4:29:17.64:476,18,0	0/1:16,4:18:14.29:358,0,14	1/1:22,1:18:2.25:278,2,0	1/1:21,0:20:18.29:396,18,0	1/1:27,2:24:17.82:394,18,0	0/1:15,2:12:22.06:203,0,22	1/1:12,2:11:13.24:230,13,0	0/1:16,0:15:35.06:35,0,69	1/1:30,2:27:41.77:617,42,0	1/1:24,0:18:18.20:108,18,0	1/1:19,1:17:21.97:119,22,0	1/1:24,2:23:15.13:251,15,0	1/1:24,4:23:14.94:149,15,0	1/1:20,4:20:20.56:390,21,0	0/1:20,1:17:19.32:173,0,19	1/1:30,2:29:13.54:374,14,0	1/1:8,1:6:5.70:97,6,0
chr10	31661706	.	GA	G	2314.42	PASS	AB=0.979;AC=43;AF=0.768;AN=56;BaseQRankSum=3.900;DP=625;FS=3.608;HRun=2;HaplotypeScore=147.9593;InbreedingCoeff=0.2071;MQ=58.26;MQ0=34;MQRankSum=-1.693;QD=4.17;ReadPosRankSum=5.510;VQSLOD=0.8050;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:37,0:35:13.17:127,13,0	0/1:9,0:9:2.58:11,0,3	0/0:28,0:11:30.10:0,30,397	0/0:42,0:22:55.02:0,55,704	1/1:24,0:24:13.45:105,13,0	0/1:30,0:30:42.10:42,0,68	0/1:15,3:17:1.22:45,0,1	1/1:26,0:25:19.03:175,19,0	0/1:26,0:26:0.39:0,0,68	0/1:26,0:26:76.03:76,0,129	1/1:21,0:21:25.52:168,26,0	1/1:31,0:29:18.02:130,18,0	1/1:18,0:17:14.23:98,14,0	0/1:18,1:18:1.19:58,0,1	1/1:15,2:17:17.32:120,17,0	1/1:25,0:22:17.66:116,18,0	0/1:15,0:11:22.68:44,0,23	1/1:11,0:11:12.83:71,13,0	0/1:18,0:18:44.10:101,0,44	1/1:24,1:25:46.97:337,47,0	1/1:21,0:19:20.37:104,20,0	1/1:18,0:18:15.65:84,16,0	1/1:23,1:23:11.48:68,11,0	1/1:19,1:19:12.47:58,12,0	1/1:23,0:20:21.23:116,21,0	0/1:20,0:18:21.33:94,0,21	1/1:26,0:25:13.06:97,13,0	1/1:7,0:7:6.90:32,7,0
chr10	31661707	.	A	AAG	9486.19	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=4.126;DP=630;FS=0.831;HRun=0;HaplotypeScore=137.2773;InbreedingCoeff=0.8957;MQ=59.16;MQ0=32;MQRankSum=-6.736;QD=16.97;ReadPosRankSum=5.928;VQSLOD=4.7780;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:35,0:34:54.09:718,54,0	1/1:9,0:9:8.53:103,9,0	0/0:28,0:11:30.01:0,30,355	0/0:43,0:23:54.56:0,55,612	1/1:25,0:25:33.10:430,33,0	1/1:30,0:30:23.65:304,24,0	1/1:19,0:18:24.08:367,24,0	1/1:26,0:25:63.20:993,63,0	1/1:24,1:27:24.08:362,24,0	1/1:27,0:27:48.08:692,48,0	1/1:23,0:23:30.06:356,30,0	1/1:30,0:29:23.85:255,24,0	1/1:16,0:16:17.88:177,18,0	1/1:18,0:18:14.91:128,15,0	1/1:18,0:18:21.27:223,21,0	1/1:25,0:22:17.88:169,18,0	1/1:13,1:10:11.90:119,12,0	1/1:7,2:10:21:258,21,0	1/1:17,0:17:39.13:598,39,0	1/1:26,0:26:55.26:648,55,0	1/1:18,2:19:24.08:343,24,0	1/1:21,0:21:24.07:303,24,0	1/1:24,0:23:23.93:307,24,0	1/1:20,0:20:17.99:227,18,0	1/1:25,0:22:23.97:295,24,0	1/1:19,0:19:48.59:668,49,0	1/1:27,0:26:29.88:321,30,0	1/1:6,1:7:9.03:123,9,0
chr10	31661751	.	C	CATACATACATAA	25257.11	PASS	AB=0.865;AC=45;AF=0.804;AN=56;BaseQRankSum=-3.944;DP=835;FS=4.332;HRun=0;HaplotypeScore=228.8567;InbreedingCoeff=0.5232;MQ=53.75;MQ0=2;MQRankSum=-7.694;QD=36.87;ReadPosRankSum=2.956;VQSLOD=4.4212;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:9,19:31:10.96:507,0,11	1/1:0,9:11:14.91:737,15,0	0/0:41,0:33:50.20:0,50,770	0/0:40,0:29:27.05:0,27,706	1/1:3,24:29:36.19:563,36,0	1/1:3,29:37:30.07:1636,30,0	1/1:2,18:24:5.93:40,6,0	0/0:52,0:51:0.61:0,1,1452	1/1:2,30:34:33.04:1655,33,0	1/1:3,32:42:93.12:3479,93,0	1/1:2,30:31:44.94:1891,45,0	1/1:7,34:43:36.08:1949,36,0	1/1:3,23:30:27.09:1612,27,0	1/1:5,19:27:20.57:1082,21,0	0/1:25,0:25:5.79:351,0,6	1/1:6,31:40:29.93:1156,30,0	1/1:5,7:14:11.95:398,12,0	0/1:13,0:12:74.06:268,0,74	0/0:17,0:16:5.52:0,6,450	1/1:40,0:40:51.16:646,51,0	1/1:22,0:22:2.94:38,3,0	1/1:2,26:31:41.84:1394,42,0	1/1:4,25:32:22.15:621,22,0	1/1:9,10:23:14.95:577,15,0	1/1:6,24:32:30.02:1475,30,0	1/1:3,25:28:66.07:2208,66,0	1/1:33,0:33:29.11:415,29,0	1/1:1,7:8:11.83:559,12,0
chr10	31661760	.	A	ATACATATG	13657.98	PASS	AB=1.000;AC=30;AF=0.556;AN=54;BaseQRankSum=2.739;DP=807;FS=3.796;HRun=0;HaplotypeScore=211.1837;InbreedingCoeff=-0.2192;MQ=49.83;MQ0=2;MQRankSum=-9.069;QD=20.39;ReadPosRankSum=12.098;VQSLOD=2.2645;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:20,0:20:34.60:175,0,35	0/1:12,0:12:36.20:235,0,36	0/0:39,0:30:38.23:0,38,531	0/0:38,0:28:18.47:0,18,440	0/1:27,0:27:91.61:92,0,398	0/1:38,0:37:99:532,0,154	0/0:21,0:21:12.04:0,12,176	1/1:56,0:55:99:1552,123,0	0/1:30,0:30:71.14:535,0,71	0/1:43,0:43:99:635,0,467	1/1:26,0:25:30.10:646,30,0	1/1:34,0:34:6.26:629,6,0	0/1:33,0:33:99:536,0,155	0/1:27,0:26:26.48:365,0,26	1/1:2,25:30:33.10:1320,33,0	0/1:37,0:36:81.96:353,0,82	0/1:12,0:11:31.81:58,0,32	0/0:12,0:11:20.92:0,21,216	1/1:16,0:16:41.30:467,41,0	1/1:3,39:46:51.18:2198,51,0	./.	0/1:30,0:30:99:412,0,150	0/1:31,0:31:99:168,0,217	0/1:20,0:20:36.42:185,0,36	0/1:32,0:31:99:470,0,143	0/1:24,0:24:99:483,0,195	1/1:1,31:35:36.08:1446,36,0	0/1:10,0:10:99:165,0,168
chr10	31662959	.	AAAAAC	A	7377.86	PASS	AB=1.000;AC=53;AF=0.946;AN=56;BaseQRankSum=-1.273;DP=468;FS=4.549;HRun=0;HaplotypeScore=150.0689;InbreedingCoeff=0.5299;MQ=60.40;MQ0=4;MQRankSum=-5.109;QD=16.69;ReadPosRankSum=1.472;VQSLOD=4.6244;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:23:43.46:376,43,0	1/1:8,0:8:3.85:43,4,0	0/0:25,0:12:30.69:0,31,292	0/1:26,0:13:9.60:10,0,174	1/1:14,0:14:26.15:243,26,0	1/1:24,0:24:21.07:279,21,0	1/1:7,0:7:9.12:73,9,0	1/1:12,0:9:11.70:82,12,0	1/1:9,0:9:12.48:190,12,0	1/1:20,0:19:43.36:359,43,0	1/1:17,0:17:35.40:295,35,0	1/1:11,0:11:25.20:205,25,0	1/1:11,0:11:26.80:202,27,0	1/1:20,1:21:35.68:431,36,0	1/1:9,0:9:20.96:176,21,0	1/1:22,0:22:39.53:453,40,0	1/1:13,0:13:22.22:235,22,0	1/1:10,0:10:5.91:52,6,0	1/1:16,0:14:25.53:243,26,0	1/1:31,0:30:46.50:484,47,0	1/1:8,0:8:19.37:146,19,0	1/1:19,1:20:30.01:356,30,0	1/1:23,0:22:56.03:551,56,0	1/1:16,0:16:36.94:343,37,0	1/1:14,2:16:36.10:374,36,0	1/1:20,0:20:35.93:374,36,0	1/1:23,0:23:55.19:475,55,0	1/1:12,0:12:14.10:329,14,0
chr10	31662960	.	AAAAC	A	9596.80	PASS	AB=1.000;AC=53;AF=0.946;AN=56;BaseQRankSum=-2.103;DP=470;FS=3.196;HRun=0;HaplotypeScore=136.6587;InbreedingCoeff=0.5177;MQ=61.19;MQ0=4;MQRankSum=-4.588;QD=21.71;ReadPosRankSum=1.651;VQSLOD=4.3829;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:16,6:22:46.88:584,47,0	1/1:8,0:8:5.45:42,5,0	0/0:28,0:13:29.23:0,29,258	0/1:26,0:13:24.20:24,0,147	1/1:9,5:14:26.40:329,26,0	1/1:24,0:24:21.06:242,21,0	1/1:7,0:7:9.53:68,10,0	1/1:13,0:10:12.80:96,13,0	1/1:8,0:9:13.98:172,14,0	1/1:17,3:19:44.79:543,45,0	1/1:14,2:16:44.47:483,44,0	1/1:9,1:10:27.06:312,27,0	1/1:10,1:11:29.96:324,30,0	1/1:14,7:21:36.03:500,36,0	1/1:9,0:9:20.97:179,21,0	1/1:6,8:22:42.10:585,42,0	1/1:6,7:13:24.07:360,24,0	1/1:5,5:10:5.91:47,6,0	1/1:16,0:14:30.80:276,31,0	1/1:31,0:29:48.64:550,49,0	1/1:10,0:9:22.48:177,22,0	1/1:4,6:19:30.06:412,30,0	1/1:13,10:22:58.61:760,59,0	1/1:8,7:15:37.62:488,38,0	1/1:12,3:15:40.55:453,41,0	1/1:13,6:19:44.58:526,45,0	1/1:27,0:27:70.24:620,70,0	1/1:3,9:12:27.76:445,28,0
chr10	31662961	.	AAACAAAAAAAC	A	14868.30	PASS	AB=1.000;AC=51;AF=0.911;AN=56;BaseQRankSum=-2.316;DP=472;FS=8.573;HRun=0;HaplotypeScore=170.2214;InbreedingCoeff=0.3009;MQ=61.17;MQ0=4;MQRankSum=-3.438;QD=33.49;ReadPosRankSum=2.464;VQSLOD=4.0609;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:23:21.23:722,21,0	1/1:8,0:8:11.88:154,12,0	0/0:28,0:13:11.85:0,12,381	0/1:26,0:13:31.91:32,0,255	1/1:13,0:13:29.85:491,30,0	1/1:7,17:24:21.07:661,21,0	1/1:6,1:7:11.96:170,12,0	1/1:14,0:10:23.89:219,24,0	1/1:9,0:9:23.93:462,24,0	1/1:20,0:19:44.97:657,45,0	1/1:15,0:15:44.85:616,45,0	1/1:10,0:10:26.99:364,27,0	1/1:9,0:10:29.79:430,30,0	1/1:20,0:20:35.97:957,36,0	1/1:13,0:13:17.74:223,18,0	1/1:20,0:21:42.03:1075,42,0	1/1:13,0:13:26.67:573,27,0	1/1:8,0:9:5.23:104,5,0	0/1:15,0:13:11.86:341,0,12	1/1:33,0:31:70.06:863,70,0	0/1:10,0:9:3.53:165,0,4	1/1:18,0:19:33.50:814,33,0	1/1:23,0:22:59.17:1071,59,0	1/1:14,0:14:12.33:672,12,0	1/1:14,0:15:41.90:742,42,0	1/1:18,0:19:48.06:894,48,0	1/1:29,0:29:8.64:517,9,0	1/1:11,0:12:36.02:880,36,0
chr10	31662962	.	AAC	A	7399.67	PASS	AB=1.000;AC=53;AF=0.946;AN=56;BaseQRankSum=-1.652;DP=482;FS=2.368;HRun=0;HaplotypeScore=132.6145;InbreedingCoeff=0.5546;MQ=61.21;MQ0=4;MQRankSum=-5.266;QD=16.33;ReadPosRankSum=0.776;VQSLOD=4.5677;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:22,1:23:46.78:394,47,0	1/1:2,6:8:9.41:86,9,0	0/0:29,0:13:19.37:0,19,168	0/1:26,0:13:60.25:60,0,60	1/1:12,1:13:26.84:220,27,0	1/1:23,1:24:20.96:174,21,0	1/1:9,0:9:11.96:100,12,0	1/1:16,0:12:22.63:145,23,0	1/1:9,1:10:25.55:183,26,0	1/1:20,0:19:44.13:369,44,0	1/1:15,0:15:44.24:354,44,0	1/1:11,0:11:26.31:203,26,0	1/1:10,0:10:28.97:202,29,0	1/1:21,0:21:35.92:295,36,0	1/1:14,0:14:20.97:180,21,0	1/1:21,0:21:41.95:355,42,0	1/1:13,0:13:22.77:180,23,0	1/1:7,1:8:5.74:38,6,0	1/1:13,0:12:35.95:320,36,0	1/1:33,0:31:70.33:624,70,0	1/1:13,0:12:34.38:255,34,0	1/1:19,0:19:29.95:250,30,0	1/1:22,1:22:59.75:503,60,0	1/1:14,0:14:37.71:294,38,0	1/1:15,0:15:41.17:330,41,0	1/1:19,0:19:47.09:371,47,0	1/1:29,0:29:78.72:671,79,0	1/1:12,0:12:32.16:245,32,0
chr10	31662963	.	AC	A	8350.02	PASS	AB=0.867;AC=53;AF=0.946;AN=56;BaseQRankSum=-1.709;DP=537;FS=4.032;HRun=1;HaplotypeScore=149.9148;InbreedingCoeff=0.5681;MQ=60.06;MQ0=4;MQRankSum=-4.920;QD=16.44;ReadPosRankSum=0.739;VQSLOD=5.1088;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:24,4:28:55.52:496,56,0	1/1:6,2:8:11.90:92,12,0	0/0:28,1:13:17.99:0,18,140	0/1:22,4:13:51.34:61,0,51	1/1:14,2:16:27.30:225,27,0	1/1:19,4:23:23.02:164,23,0	1/1:13,1:14:17.40:130,17,0	1/1:18,0:14:31.46:210,31,0	1/1:7,3:10:27.27:238,27,0	1/1:18,7:24:54.51:514,55,0	1/1:17,3:19:50.51:436,51,0	1/1:15,4:19:29.98:288,30,0	1/1:14,6:20:32.13:293,32,0	1/1:8,13:21:35.85:295,36,0	1/1:16,0:15:20.97:181,21,0	1/1:17,4:21:41.90:370,42,0	1/1:10,2:12:24.86:217,25,0	1/1:8,0:8:5.34:28,5,0	1/1:13,1:12:35.94:310,36,0	1/1:33,0:31:81.46:656,81,0	1/1:13,0:12:35.61:277,36,0	1/1:17,1:18:29.91:246,30,0	1/1:18,6:23:64.88:566,65,0	1/1:16,2:18:39.96:345,40,0	1/1:14,4:18:41.30:372,41,0	1/1:19,2:21:52.70:431,53,0	1/1:27,2:29:79.84:665,80,0	1/1:15,0:15:23.47:245,23,0
chr10	31662971	.	AC	A	5898.92	PASS	AB=0.936;AC=54;AF=0.964;AN=56;BaseQRankSum=-1.963;DP=577;FS=3.728;HRun=1;HaplotypeScore=152.6758;InbreedingCoeff=0.1465;MQ=60.81;MQ0=4;MQRankSum=-4.822;QD=10.22;ReadPosRankSum=3.874;VQSLOD=3.1130;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,13:27:19:184,19,0	1/1:9,0:9:12.73:99,13,0	0/1:29,1:12:4.55:5,0,51	0/1:25,3:15:47.19:47,0,64	1/1:8,9:17:25.34:191,25,0	1/1:22,1:23:22.48:112,22,0	1/1:3,11:14:11.56:75,12,0	1/1:25,0:20:45.70:339,46,0	1/1:14,0:14:33.09:249,33,0	1/1:11,12:22:26.19:267,26,0	1/1:12,3:14:13.93:173,14,0	1/1:5,13:18:10.82:65,11,0	1/1:9,13:22:29.51:146,30,0	1/1:26,0:26:60.47:391,60,0	1/1:20,0:19:20.56:160,21,0	1/1:21,0:21:23.61:126,24,0	1/1:19,1:20:27.81:156,28,0	1/1:9,0:9:7.96:42,8,0	1/1:18,0:16:44.81:366,45,0	1/1:35,0:33:79.17:639,79,0	1/1:13,0:12:35.91:298,36,0	1/1:18,0:18:28.42:138,28,0	1/1:18,8:25:38.45:203,38,0	1/1:10,9:19:28.09:149,28,0	1/1:11,5:16:15.69:88,16,0	1/1:10,7:17:37.19:254,37,0	1/1:35,2:36:99:815,100,0	1/1:11,5:16:12.24:122,12,0
chr10	31662972	.	CAAAAAAAA	C	8080.40	PASS	AB=0.947;AC=39;AF=0.696;AN=56;BaseQRankSum=8.686;DP=577;FS=12.536;HRun=13;HaplotypeScore=198.7926;InbreedingCoeff=0.5419;MQ=58.05;MQ0=3;MQRankSum=-4.442;QD=19.06;ReadPosRankSum=7.084;VQSLOD=0.6540;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:19,7:26:1.02:476,1,0	0/1:9,0:10:25.76:26,0,60	0/1:31,0:12:1.38:1,0,277	0/0:24,0:12:20.73:0,21,318	1/1:12,6:18:23.62:413,24,0	1/1:18,0:23:4.13:265,4,0	0/1:14,0:14:31.84:32,0,34	0/0:23,0:18:45.61:0,46,284	0/1:11,0:14:99:135,0,121	1/1:20,3:23:34.84:464,35,0	1/1:11,2:13:34.18:340,34,0	1/1:17,1:19:17.19:166,17,0	1/1:19,2:22:22.46:236,22,0	1/1:17,8:26:56.86:874,57,0	0/0:20,0:19:7.33:0,7,50	1/1:11,9:21:35.32:726,35,0	1/1:15,6:21:18.57:384,19,0	1/1:10,1:11:10.12:132,10,0	0/1:17,0:16:53.81:54,0,175	0/0:35,0:33:29.71:0,30,182	0/0:13,0:12:22.14:0,22,166	1/1:10,7:18:29.70:584,30,0	1/1:16,10:25:40.07:678,40,0	1/1:13,6:19:19.24:420,19,0	1/1:11,5:16:26.29:436,26,0	1/1:10,7:17:32.58:580,33,0	0/0:37,0:36:41.25:0,41,437	1/1:8,9:17:33.39:661,33,0
chr10	31662980	.	A	AC	2441.62	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=2.948;DP=537;FS=1.800;HRun=0;HaplotypeScore=157.6967;InbreedingCoeff=0.9097;MQ=62.43;MQ0=3;MQRankSum=-3.049;QD=8.03;ReadPosRankSum=3.514;VQSLOD=3.9958;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:24,1:25:32.75:248,33,0	0/0:7,0:7:20.87:0,21,158	0/0:32,0:13:20.59:0,21,185	0/0:29,0:17:21.21:0,21,303	1/1:18,0:18:22.75:196,23,0	0/0:24,0:24:32.30:0,32,212	0/0:12,0:12:14.90:0,15,113	0/0:23,0:20:49.96:0,50,325	0/0:12,0:12:13.61:0,14,235	1/1:27,0:26:24.68:365,25,0	1/1:12,0:11:12.67:171,13,0	1/1:17,0:17:8.08:67,8,0	1/1:20,0:20:11:111,11,0	1/1:24,0:24:43.94:301,44,0	0/0:17,0:16:6.45:0,6,49	1/1:22,0:22:10.13:137,10,0	1/1:9,11:20:11.46:67,11,0	1/1:11,0:11:1.89:63,2,0	0/0:19,0:18:44.58:0,45,324	0/0:16,0:15:26.34:0,26,189	0/0:9,0:8:23.69:0,24,168	1/1:20,0:20:33.03:186,33,0	1/1:25,0:25:48.59:278,49,0	1/1:19,0:19:16.42:112,16,0	1/1:14,0:14:9.08:72,9,0	1/1:15,0:15:22.92:183,23,0	0/0:33,0:32:83.21:0,83,638	1/1:15,0:15:26.38:106,26,0
chr10	31662983	.	A	AC	5455.78	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=0.280;DP=534;FS=6.068;HRun=0;HaplotypeScore=138.9578;InbreedingCoeff=0.8433;MQ=60.43;MQ0=2;MQRankSum=-0.954;QD=11.76;ReadPosRankSum=2.608;VQSLOD=5.6286;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:27:36.97:289,37,0	1/1:7,0:7:20.72:159,21,0	0/0:27,0:11:27.01:0,27,268	0/0:26,0:17:21.33:0,21,356	1/1:19,0:19:25.31:220,25,0	1/1:22,0:22:18.54:120,19,0	1/1:14,0:14:18.21:138,18,0	1/1:23,0:21:38.14:460,38,0	1/1:15,0:15:25.94:218,26,0	1/1:29,0:28:32.79:400,33,0	1/1:13,0:12:31.25:205,31,0	1/1:17,0:17:13.50:71,13,0	1/1:20,1:21:28.79:176,29,0	1/1:25,0:25:47.81:348,48,0	0/0:3,14:16:1.25:0,1,3	1/1:21,0:21:34.37:205,34,0	1/1:19,0:19:22.95:100,23,0	1/1:9,0:9:17.35:115,17,0	1/1:17,0:16:21.07:286,21,0	1/1:14,0:13:30.07:236,30,0	1/1:11,0:10:23.95:219,24,0	1/1:20,0:20:36.55:201,37,0	1/1:27,0:27:47.21:292,47,0	1/1:18,0:18:3.23:78,3,0	1/1:15,0:15:25.75:158,26,0	1/1:15,0:15:26.25:225,26,0	1/1:29,0:28:39.61:425,40,0	1/1:17,0:17:27.16:111,27,0
chr10	31663451	.	AAGTAACTTGCAT	A	9319.73	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=13.858;DP=560;FS=3.164;HRun=0;HaplotypeScore=193.7922;InbreedingCoeff=0.9635;MQ=86.70;MQ0=0;MQRankSum=-11.995;QD=86.29;ReadPosRankSum=2.336;VQSLOD=4.9247;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:72.23:0,72,4178	0/0:11,0:11:33.11:0,33,1815	0/0:19,0:19:54.19:0,54,2539	0/0:22,0:22:66.22:0,66,3074	0/0:31,0:31:93.30:0,93,5418	0/0:27,0:27:81.28:0,81,4756	0/0:13,0:13:36.12:0,36,1919	1/1:6,15:21:45.13:1557,45,0	0/0:18,0:18:54.19:0,54,3213	0/0:33,0:33:99:0,99,5664	0/0:17,0:17:51.17:0,51,2951	0/0:16,0:16:48.16:0,48,2738	0/0:17,0:17:51.15:0,51,2873	0/0:23,0:23:69.24:0,69,3962	1/1:1,10:11:27.09:1042,27,0	0/0:18,0:18:51.18:0,51,2927	0/0:26,0:26:69.24:0,69,4140	0/0:11,0:11:33.11:0,33,1929	1/1:5,17:22:51.16:1676,51,0	1/1:2,24:26:69.16:2471,69,0	1/1:2,0:2:3:27,3,0	0/0:19,0:19:57.20:0,57,3154	0/0:28,0:28:84.26:0,84,4670	0/0:17,0:17:51.16:0,51,2803	0/0:16,0:16:48.15:0,48,2826	0/0:25,0:25:75.25:0,75,4297	1/1:2,24:26:66.23:2547,66,0	0/0:21,0:21:57.20:0,57,3373
chr10	31663919	.	TAGCAGC	T	790.96	PASS	AB=0.964;AC=18;AF=0.818;AN=22;BaseQRankSum=-0.834;DP=508;FS=1.710;HRun=0;HaplotypeScore=116.5503;InbreedingCoeff=0.3714;MQ=71.68;MQ0=9;MQRankSum=-1.079;QD=3.28;ReadPosRankSum=-2.697;VQSLOD=1.4747;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/1:7,0:7:0:0,0,0	./.	./.	./.	./.	./.	./.	1/1:34,0:34:3.01:42,3,0	./.	./.	1/1:18,3:21:2.96:19,3,0	1/1:18,5:23:9.03:134,9,0	0/1:24,2:25:0.98:69,0,1	1/1:17,0:23:3.01:42,3,0	1/1:18,5:23:9.03:155,9,0	1/1:30,8:38:6.02:98,6,0	1/1:15,0:15:9:130,9,0	./.	./.	./.	./.	./.	1/1:31,0:31:20:191,20,0	./.	./.	0/0:18,0:18:17.84:0,18,127	./.
chr10	31664522	.	C	CCGT	277.95	PASS	AB=1.000;AC=9;AF=0.237;AN=38;BaseQRankSum=-1.894;DP=238;DS;FS=35.458;HRun=0;HaplotypeScore=53.1645;InbreedingCoeff=0.4648;MQ=43.56;MQ0=38;MQRankSum=0.715;QD=9.58;ReadPosRankSum=-0.624;VQSLOD=1.1968;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:2,0:1:2.94:0,3,18	0/0:6,0:5:11.77:0,12,74	0/0:27,0:14:39.13:0,39,700	0/0:32,0:17:22.92:0,23,710	0/0:19,1:11:17.60:0,18,110	0/0:6,1:1:2.94:0,3,18	./.	1/1:0,2:2:6.02:148,6,0	0/0:6,0:1:2.94:0,3,18	0/0:11,0:8:23.55:0,24,148	0/0:11,0:7:20.59:0,21,129	0/0:4,1:1:2.94:0,3,18	1/1:5,3:1:3.01:74,3,0	./.	./.	1/1:1,7:1:3.01:74,3,0	./.	./.	./.	./.	1/1:0,2:1:3.01:74,3,0	0/0:13,2:12:29.07:0,29,176	0/0:23,1:20:47.10:0,47,295	./.	0/0:3,2:3:8.83:0,9,55	0/0:5,0:4:11.77:0,12,74	./.	0/1:9,0:9:26.30:26,0,102
chr10	31665535	.	CG	C	321.63	PASS	AC=10;AF=0.185;AN=54;BaseQRankSum=-0.405;DP=388;FS=1.983;HRun=3;HaplotypeScore=57.3368;InbreedingCoeff=0.7639;MQ=42.55;MQ0=56;MQRankSum=-2.670;QD=8.69;ReadPosRankSum=-1.476;VQSLOD=0.5380;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:20:35.60:0,36,198	0/0:7,0:6:15.43:0,15,105	0/0:30,0:2:0.77:0,1,11	0/0:37,0:6:8.56:0,9,64	0/0:11,0:10:17.73:0,18,106	0/0:20,0:20:44.28:0,44,286	0/0:15,0:12:28.85:0,29,164	1/1:10,2:11:23.02:190,23,0	0/0:10,0:10:18.44:0,18,118	0/0:10,0:9:19.37:0,19,117	0/0:12,0:11:23.42:0,23,139	0/0:13,0:11:6.34:0,6,30	0/0:11,0:9:23.35:0,23,149	0/0:12,0:11:18.01:0,18,129	1/1:2,3:4:9.02:93,9,0	0/0:7,0:6:7.96:0,8,52	0/0:22,0:19:37.74:0,38,233	0/0:19,0:15:29.32:0,29,194	1/1:9,0:5:11.90:88,12,0	1/1:3,3:3:5.84:34,6,0	1/1:5,0:3:8.96:70,9,0	0/0:10,0:7:0.78:0,1,2	0/0:19,0:16:30.13:0,30,179	0/0:20,0:19:33.34:0,33,215	0/0:5,0:4:2.68:0,3,11	0/0:10,0:8:17.86:0,18,107	./.	0/0:15,0:10:19.06:0,19,117
chr10	31665538	.	GA	G	1087.85	PASS	AB=0.978;AC=36;AF=0.667;AN=54;BaseQRankSum=-3.851;DP=429;FS=1.716;HRun=15;HaplotypeScore=65.0321;InbreedingCoeff=0.0609;MQ=41.66;MQ0=58;MQRankSum=3.890;QD=3.10;ReadPosRankSum=5.689;VQSLOD=-0.4483;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:22:4.70:116,5,0	1/1:8,0:7:10.98:55,11,0	0/1:37,2:4:6.64:9,0,7	0/0:47,0:6:8.57:0,9,57	1/1:9,0:9:9.39:47,9,0	0/1:21,1:23:33.54:92,0,34	1/1:15,1:12:20.14:91,20,0	0/1:18,0:16:8.42:8,0,64	0/1:10,0:10:12.81:16,0,13	1/1:9,0:8:12.09:56,12,0	1/1:14,0:13:16.37:82,16,0	0/1:12,0:10:0.14:47,0,0	0/1:12,0:10:3:12,0,3	0/1:10,0:9:11.41:21,0,11	0/1:9,0:7:16.01:16,0,34	1/1:8,0:7:8.01:53,8,0	1/1:22,1:20:26.81:150,27,0	1/1:21,1:18:20.96:95,21,0	0/0:9,0:7:0.09:0,0,19	0/0:7,0:4:0.89:0,1,2	./.	1/1:11,0:8:7.84:38,8,0	1/1:19,0:17:18.25:92,18,0	0/1:21,1:20:14.20:50,0,14	1/1:4,0:4:2.78:14,3,0	0/1:10,1:9:11.45:31,0,11	0/0:10,0:5:7.31:0,7,31	1/1:12,1:9:8.37:47,8,0
chr10	31665553	.	AG	A	2839.08	PASS	AB=0.995;AC=51;AF=0.911;AN=56;BaseQRankSum=-1.717;DP=513;FS=0.000;HRun=1;HaplotypeScore=77.2932;InbreedingCoeff=0.0951;MQ=50.33;MQ0=44;MQRankSum=3.669;QD=6.38;ReadPosRankSum=0.044;VQSLOD=0.2884;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:26,3:26:46.29:267,46,0	1/1:6,0:5:13.10:54,13,0	0/1:62,1:14:18.07:20,0,18	0/0:66,2:11:0.54:0,1,51	1/1:13,0:13:9.12:112,9,0	1/1:18,1:19:20.19:151,20,0	1/1:14,1:13:26.64:134,27,0	0/1:23,0:20:38.41:140,0,38	1/1:12,1:13:9.27:72,9,0	1/1:20,1:21:34.76:175,35,0	1/1:10,3:12:21.79:149,22,0	1/1:14,0:12:23.37:104,23,0	1/1:11,1:12:14.99:127,15,0	1/1:10,0:9:13.86:60,14,0	1/1:13,0:11:3.35:14,3,0	1/1:13,0:12:23.16:102,23,0	1/1:21,1:20:38.52:238,39,0	1/1:20,0:16:25.67:131,26,0	1/1:13,0:10:7.78:84,8,0	1/1:6,0:4:8.61:51,9,0	0/1:2,0:2:7.64:14,0,8	1/1:12,0:10:13.22:77,13,0	1/1:19,0:18:16.24:171,16,0	1/1:17,1:16:2.22:80,2,0	1/1:12,1:12:16.09:80,16,0	1/1:14,1:13:17.70:127,18,0	1/1:18,0:13:28.99:190,29,0	1/1:10,0:6:4.26:31,4,0
chr10	31665554	.	G	GA	5002.27	PASS	AB=0.982;AC=51;AF=0.911;AN=56;BaseQRankSum=-4.083;DP=520;FS=3.175;HRun=15;HaplotypeScore=74.0587;InbreedingCoeff=0.0492;MQ=51.66;MQ0=44;MQRankSum=4.337;QD=9.62;ReadPosRankSum=1.128;VQSLOD=4.4612;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:28,1:26:56.17:520,56,0	1/1:6,0:5:11.98:107,12,0	0/1:63,0:14:27.95:36,0,28	0/1:69,0:13:2.48:2,0,78	1/1:10,2:12:2.40:194,2,0	1/1:17,1:18:40.73:355,41,0	1/1:16,0:14:5.57:199,6,0	1/1:23,0:20:2.72:25,3,0	1/1:13,0:13:7.21:92,7,0	1/1:19,1:21:49.37:548,49,0	1/1:13,0:12:24.29:214,24,0	1/1:15,0:13:15.85:179,16,0	1/1:12,0:12:25.20:232,25,0	0/1:9,1:9:7.54:95,0,8	1/1:8,0:13:6.90:32,7,0	1/1:11,1:11:22.13:183,22,0	1/1:23,0:21:36.23:345,36,0	1/1:19,1:16:11.22:253,11,0	1/1:7,0:9:15.27:64,15,0	1/1:6,0:5:2.80:13,3,0	1/1:2,0:2:0.47:1,0,0	1/1:12,0:10:13.23:116,13,0	1/1:19,0:18:14.44:317,14,0	0/1:18,0:16:0.79:163,0,1	1/1:13,0:12:30.03:299,30,0	1/1:15,0:13:31.76:309,32,0	1/1:20,0:15:6.47:53,6,0	0/1:10,0:6:15.37:54,0,15
chr10	31665559	.	A	AA	5002.32	PASS	AB=1.000;AC=51;AF=0.911;AN=56;BaseQRankSum=-4.093;DP=531;FS=3.175;HRun=5;HaplotypeScore=73.5627;InbreedingCoeff=0.0492;MQ=52.66;MQ0=35;MQRankSum=4.887;QD=9.42;ReadPosRankSum=3.042;VQSLOD=1.5979;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:26:56.17:520,56,0	1/1:6,0:6:11.98:107,12,0	0/1:66,0:15:27.95:36,0,28	0/1:74,0:13:2.48:2,0,78	1/1:12,0:12:2.40:194,2,0	1/1:17,0:17:40.73:355,41,0	1/1:15,0:14:5.57:199,6,0	1/1:26,0:24:2.72:25,3,0	1/1:7,6:14:7.21:92,7,0	1/1:24,0:24:49.37:548,49,0	1/1:12,0:12:24.29:214,24,0	1/1:14,0:13:15.85:179,16,0	1/1:13,0:13:25.20:232,25,0	0/1:10,0:9:7.54:95,0,8	1/1:15,0:14:6.90:32,7,0	1/1:12,0:11:22.13:183,22,0	1/1:21,0:20:36.23:345,36,0	1/1:18,0:16:11.22:253,11,0	1/1:11,0:9:15.27:64,15,0	1/1:7,0:5:2.80:13,3,0	1/1:3,0:3:0.47:1,0,0	1/1:12,0:10:13.23:116,13,0	1/1:19,0:18:14.44:317,14,0	0/1:18,0:16:0.79:163,0,1	1/1:16,0:16:30.03:299,30,0	1/1:17,0:15:31.76:309,32,0	1/1:21,0:17:6.47:53,6,0	0/1:10,0:6:15.37:54,0,15
chr10	31665940	.	AG	A	16622.15	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-2.653;DP=667;FS=10.770;HRun=2;HaplotypeScore=76.1541;InbreedingCoeff=0.9996;MQ=88.48;MQ0=0;MQRankSum=-3.894;QD=35.90;ReadPosRankSum=6.999;VQSLOD=4.1470;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,34:35:93.30:1207,93,0	1/1:0,9:9:24.08:312,24,0	0/0:28,0:28:84.28:0,84,1255	0/0:23,0:23:60.14:0,60,839	1/1:0,26:26:69.22:896,69,0	1/1:0,25:25:69.22:896,69,0	1/1:0,17:17:45.15:584,45,0	0/0:31,0:31:90.29:0,90,1313	1/1:1,25:26:69.22:896,69,0	1/1:1,36:37:99:1403,108,0	1/1:1,26:26:66.21:857,66,0	1/1:0,16:16:45.15:584,45,0	1/1:0,21:21:57.19:740,57,0	1/1:0,16:16:48.16:621,48,0	0/0:22,0:22:66.22:0,66,988	1/1:0,17:17:51.17:662,51,0	1/1:0,26:26:75.24:974,75,0	1/1:0,13:13:39.13:507,39,0	0/0:26,0:26:75.25:0,75,1106	0/0:23,0:23:60.20:0,60,898	0/0:24,0:24:66.22:0,66,989	1/1:1,36:37:99:1319,102,0	1/1:1,27:27:66.21:852,66,0	1/1:0,20:20:57.19:740,57,0	1/1:0,15:14:42.14:545,42,0	1/1:0,36:36:99:1403,108,0	0/0:27,0:27:81.24:0,81,1184	1/1:0,16:16:48.16:623,48,0
chr10	31666097	.	TA	T	9157.87	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=11.158;DP=573;FS=3.284;HRun=8;HaplotypeScore=52.8849;InbreedingCoeff=0.9832;MQ=70.75;MQ0=1;MQRankSum=-1.961;QD=22.34;ReadPosRankSum=5.533;VQSLOD=4.9643;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,14:16:42.06:405,42,0	1/1:1,4:4:9.01:87,9,0	0/0:15,0:14:24.06:0,24,276	0/0:20,0:20:39.23:0,39,552	1/1:4,32:27:66.10:637,66,0	1/1:1,29:29:81.13:782,81,0	1/1:0,8:8:18.03:174,18,0	0/0:29,0:29:72.21:0,72,851	1/1:1,20:21:60.10:579,60,0	1/1:4,25:27:66.09:632,66,0	1/1:3,32:29:72.11:695,72,0	1/1:3,16:18:39.06:377,39,0	1/1:0,18:18:45.07:435,45,0	1/1:4,17:21:51.07:493,51,0	0/0:12,0:12:36.11:0,36,435	1/1:2,18:19:48.07:464,48,0	1/1:1,19:20:48.07:463,48,0	1/1:2,11:13:30.05:290,30,0	0/0:23,0:23:60.17:0,60,715	0/0:26,0:26:72.22:0,72,869	0/0:6,0:6:12.04:0,12,145	1/1:3,14:14:32.97:306,33,0	1/1:0,23:17:45.07:435,45,0	1/1:1,20:20:54.09:521,54,0	1/1:0,19:16:42.07:406,42,0	1/1:0,22:21:63.09:602,63,0	0/0:32,0:32:93.29:0,93,1123	1/1:0,17:15:39.06:377,39,0
chr10	31667567	.	C	CT	4853.94	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-0.615;DP=607;FS=1.810;HRun=1;HaplotypeScore=91.9443;InbreedingCoeff=0.9982;MQ=71.56;MQ0=5;MQRankSum=3.372;QD=42.21;ReadPosRankSum=2.405;VQSLOD=5.1124;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:66.21:0,66,857	1/1:0,11:11:33.11:495,33,0	0/0:30,0:22:51.12:0,51,632	0/0:36,0:28:46.97:0,47,599	1/1:2,24:26:72.24:1079,72,0	1/1:1,22:23:66.22:987,66,0	1/1:2,14:16:39.13:585,39,0	0/0:40,0:40:99:0,117,1482	1/1:0,22:22:66.22:989,66,0	0/0:16,0:16:36.11:0,36,454	0/0:21,0:21:60.18:0,60,765	0/0:29,0:29:87.28:0,87,1128	0/0:25,0:25:75.23:0,75,958	0/0:29,0:29:87.28:0,87,1129	1/1:0,17:17:48.16:719,48,0	0/0:24,0:24:72.22:0,72,920	0/0:21,0:21:60.12:0,60,729	0/0:12,0:12:33.11:0,33,427	0/0:17,0:17:48.16:0,48,623	0/0:23,0:23:63.19:0,63,792	0/0:33,0:33:96.31:0,96,1245	0/0:7,0:7:21.07:0,21,273	0/0:8,0:8:21.07:0,21,272	0/0:11,0:11:33.11:0,33,428	0/0:23,0:23:66.21:0,66,857	0/0:17,0:17:51.16:0,51,650	0/0:26,0:25:75.22:0,75,942	0/0:17,0:17:45.15:0,45,584
chr10	31668626	.	G	GCACA	609.21	PASS	AB=0.851;AC=12;AF=0.214;AN=56;BaseQRankSum=2.676;DP=610;FS=3.895;HRun=0;HaplotypeScore=169.4685;InbreedingCoeff=-0.0619;MQ=56.75;MQ0=11;MQRankSum=-4.068;QD=2.78;ReadPosRankSum=-3.926;VQSLOD=1.4490;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:41:99:0,109,1509	0/1:13,0:13:97.54:98,0,111	0/0:43,0:20:9.80:0,10,178	0/0:27,0:15:22.03:0,22,377	0/1:26,0:28:70.82:71,0,409	0/1:10,0:14:7.93:8,0,124	0/1:20,0:30:86.26:86,0,457	0/1:21,0:21:13.69:14,0,439	0/1:15,1:19:88.18:88,0,176	0/0:20,0:18:48.10:0,48,772	0/0:11,0:11:21.07:0,21,330	0/0:19,0:19:45.10:0,45,703	0/0:13,0:13:24.07:0,24,379	0/0:24,0:24:50.92:0,51,781	1/1:17,0:17:14.53:138,15,0	0/0:20,0:21:56.90:0,57,889	0/0:35,0:35:69.04:0,69,1001	0/0:12,0:12:17.98:0,18,402	0/1:13,6:19:99:181,0,224	0/1:10,6:16:49.88:50,0,178	0/1:29,0:29:14.43:14,0,345	0/0:24,0:24:44.74:0,45,701	0/0:23,0:23:42.51:0,43,619	0/0:28,0:27:72.15:0,72,1108	0/0:23,0:22:42.07:0,42,639	0/0:16,0:16:48.16:0,48,809	0/1:8,3:12:15.61:16,0,143	0/0:10,0:10:24.08:0,24,423
chr10	31668636	.	G	GCACACACACA	2555.47	PASS	AB=0.991;AC=25;AF=0.446;AN=56;BaseQRankSum=-10.981;DP=633;FS=1.590;HRun=0;HaplotypeScore=233.8450;InbreedingCoeff=0.7473;MQ=54.02;MQ0=15;MQRankSum=-2.192;QD=8.75;ReadPosRankSum=-7.450;VQSLOD=0.3137;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:46:37.37:0,37,817	1/1:3,0:13:14.98:541,15,0	0/1:36,0:12:2.87:26,0,3	0/0:34,0:16:8.50:0,9,78	1/1:31,0:31:27.31:265,27,0	1/1:16,0:16:14.87:109,15,0	1/1:27,0:27:26.58:211,27,0	1/1:23,0:23:33.68:249,34,0	1/1:16,0:16:10.75:97,11,0	0/1:23,0:21:8.39:8,0,647	0/0:10,0:10:12.01:0,12,230	0/0:21,0:21:29.89:0,30,544	0/0:16,0:16:20.59:0,21,434	0/0:24,0:24:19.43:0,19,711	1/1:3,13:19:14.52:663,15,0	0/0:22,0:22:47.59:0,48,950	0/0:37,0:37:6.02:0,6,601	0/1:14,0:14:21.89:22,0,370	1/1:17,0:16:29.44:240,29,0	1/1:18,0:18:8.60:74,9,0	1/1:26,0:26:20.86:225,21,0	0/0:27,0:27:36.46:0,36,557	0/0:23,0:23:24.61:0,25,449	0/0:28,0:27:53.22:0,53,907	0/0:23,0:22:20.95:0,21,340	0/0:18,0:18:21.65:0,22,479	1/1:12,0:12:5.05:37,5,0	0/0:11,0:11:23.57:0,24,553
chr10	31668656	.	ACACACT	A	3811.20	PASS	AB=1.000;AC=35;AF=0.625;AN=56;BaseQRankSum=2.325;DP=606;FS=3.645;HRun=0;HaplotypeScore=184.9871;InbreedingCoeff=0.5364;MQ=63.84;MQ0=9;MQRankSum=1.667;QD=8.76;ReadPosRankSum=7.111;VQSLOD=2.1833;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:48,1:49:51.50:652,52,0	0/0:11,0:11:24.06:0,24,508	0/0:25,0:10:22.91:0,23,321	0/0:36,0:20:36.16:0,36,575	0/0:26,0:26:41.02:0,41,612	0/0:14,0:14:14.96:0,15,201	0/0:24,0:24:44.55:0,45,883	0/1:27,0:27:99:269,0,285	0/0:14,0:14:20.57:0,21,343	1/1:24,1:25:69.29:470,69,0	1/1:11,0:11:10.71:42,11,0	1/1:17,3:20:1.99:192,2,0	1/1:17,0:17:18.50:74,19,0	1/1:19,2:21:35.15:242,35,0	0/0:21,0:21:35.38:0,35,570	1/1:21,0:21:46.05:223,46,0	1/1:28,3:31:37.75:273,38,0	1/1:13,0:13:26.51:185,27,0	0/1:16,0:16:74.18:74,0,417	0/1:18,0:18:74.90:75,0,160	0/1:25,0:25:99:112,0,282	1/1:25,0:25:7.09:153,7,0	1/1:21,0:21:21.57:85,22,0	1/1:34,0:34:47.47:189,47,0	0/1:20,0:19:27.36:27,0,69	1/1:19,0:19:48.84:273,49,0	1/1:9,0:9:0.06:55,0,0	1/1:12,1:13:21.51:146,22,0
chr10	31668658	.	ACACT	A	11296.81	PASS	AB=1.000;AC=36;AF=0.643;AN=56;BaseQRankSum=-7.618;DP=597;FS=0.887;HRun=0;HaplotypeScore=142.3301;InbreedingCoeff=0.6614;MQ=65.85;MQ0=7;MQRankSum=0.883;QD=26.27;ReadPosRankSum=5.262;VQSLOD=4.2670;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:28,20:48:99:1684,108,0	0/0:11,0:11:21.05:0,21,324	0/0:24,0:12:28.71:0,29,339	0/0:33,0:18:38.28:0,38,548	0/0:25,0:25:35.51:0,36,479	0/0:15,0:15:17.83:0,18,182	0/0:24,0:24:41.69:0,42,684	0/1:25,0:25:99:278,0,116	0/0:14,0:14:20.99:0,21,254	1/1:1,24:25:75.12:1146,75,0	1/1:0,11:11:12.04:232,12,0	1/1:4,16:20:30.07:499,30,0	1/1:2,15:17:21.07:405,21,0	1/1:3,18:21:39.13:702,39,0	0/0:21,0:21:35.80:0,36,463	1/1:1,20:21:51.11:925,51,0	1/1:4,26:30:42.14:767,42,0	1/1:6,6:12:33.08:535,33,0	0/1:16,0:16:78.42:78,0,267	0/1:17,0:17:83.76:97,0,84	0/1:26,0:26:97.44:146,0,97	1/1:1,23:24:36.94:637,37,0	1/1:2,20:22:23.80:462,24,0	1/1:2,31:33:54.19:1041,54,0	1/1:3,17:19:20.98:329,21,0	1/1:0,20:20:57.09:859,57,0	1/1:9,0:9:4.43:35,4,0	1/1:1,12:13:24.08:442,24,0
chr10	31668793	.	GT	G	12271.25	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=9.487;DP=581;FS=1.144;HRun=6;HaplotypeScore=108.3718;InbreedingCoeff=0.9999;MQ=90.69;MQ0=0;MQRankSum=-4.454;QD=28.54;ReadPosRankSum=6.461;VQSLOD=3.9806;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,17:17:45.11:484,45,0	1/1:0,15:15:41.93:449,42,0	0/0:24,0:24:72.19:0,72,884	0/0:22,0:22:60.87:0,61,804	1/1:2,20:22:54.13:579,54,0	1/1:1,20:21:60.15:644,60,0	1/1:2,14:16:39.10:419,39,0	0/0:30,0:30:78.23:0,78,990	1/1:2,18:20:54.08:566,54,0	1/1:2,25:27:71.95:746,72,0	1/1:0,17:17:51.13:547,51,0	1/1:1,17:18:51.13:548,51,0	1/1:0,14:14:36.09:387,36,0	1/1:0,18:18:45.11:482,45,0	1/1:0,33:33:93.23:998,93,0	1/1:0,23:23:63.16:677,63,0	1/1:1,21:22:63.16:677,63,0	1/1:1,18:19:51.13:548,51,0	0/0:22,0:22:66.21:0,66,868	0/0:24,0:24:69.22:0,69,908	0/0:12,0:12:36.10:0,36,458	1/1:1,20:21:60.15:644,60,0	1/1:1,15:16:32.77:354,33,0	1/1:2,19:21:51.13:548,51,0	1/1:2,23:25:63.16:677,63,0	1/1:1,27:28:78.01:829,78,0	0/0:17,0:17:45.15:0,45,591	1/1:0,17:17:45.03:468,45,0
chr10	31669028	.	T	TCAAA	17064.20	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-15.615;DP=608;FS=4.592;HRun=0;HaplotypeScore=84.4518;InbreedingCoeff=0.9865;MQ=87.39;MQ0=2;MQRankSum=-5.195;QD=55.77;ReadPosRankSum=4.578;VQSLOD=6.2419;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,32:39:87.30:2176,87,0	0/0:9,0:9:24.08:0,24,431	0/0:29,0:29:72.16:0,72,1085	0/0:26,0:25:42.10:0,42,653	0/0:32,0:32:81.27:0,81,1428	0/0:25,0:25:72.16:0,72,1257	0/0:15,0:15:42.14:0,42,748	0/0:39,0:39:99:0,108,1849	0/0:20,0:20:57.20:0,57,1018	1/1:2,19:21:57.20:1453,57,0	1/1:4,11:15:36.12:934,36,0	1/1:3,12:16:33.11:833,33,0	1/1:4,24:28:66.23:1668,66,0	1/1:3,20:23:45.15:1169,45,0	0/0:26,0:26:69.24:0,69,1239	1/1:2,25:26:6.86:1277,7,0	1/1:3,13:19:30.10:780,30,0	1/1:0,10:11:30.10:681,30,0	0/0:19,0:19:45.12:0,45,763	0/0:9,0:9:27.09:0,27,485	0/0:34,0:34:90.26:0,90,1555	1/1:1,12:15:32.94:735,33,0	1/1:2,18:20:41.84:905,42,0	1/1:2,14:16:33.11:858,33,0	1/1:1,19:21:57.20:1442,57,0	1/1:2,21:24:63.22:1609,63,0	0/0:19,0:19:54.19:0,54,971	1/1:0,9:9:21.07:546,21,0
chr10	31669250	.	G	GA	1121.37	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-3.794;DP=160;FS=1.299;HRun=0;HaplotypeScore=33.2501;InbreedingCoeff=0.2291;MQ=99.63;MQ0=1;MQRankSum=-3.464;QD=8.76;ReadPosRankSum=2.141;VQSLOD=3.1866;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,8:10:3.01:41,3,0	1/1:0,0:3:2.94:18,3,0	0/0:11,0:7:14.84:0,15,128	0/0:16,0:14:6.14:0,6,95	1/1:2,4:6:2.09:16,2,0	0/0:2,2:5:0.47:0,0,1	1/1:1,0:6:4.43:40,4,0	1/1:5,0:5:9.01:83,9,0	1/1:3,4:7:8.96:84,9,0	1/1:3,2:5:15.03:155,15,0	1/1:0,2:2:5.98:60,6,0	1/1:4,0:4:2.99:23,3,0	1/1:0,6:6:3.01:37,3,0	1/1:1,0:2:3.43:20,3,0	1/1:4,2:7:5.99:49,6,0	1/1:1,0:5:2.49:18,2,0	1/1:0,1:9:17.74:131,18,0	1/1:2,0:4:5.96:46,6,0	1/1:2,0:2:6.01:55,6,0	1/1:4,0:4:6.01:65,6,0	1/1:4,0:10:2.95:19,3,0	1/1:0,5:5:3.01:40,3,0	1/1:0,4:4:2.94:38,3,0	1/1:3,4:7:3.01:41,3,0	1/1:3,0:4:3.01:35,3,0	1/1:5,0:5:6:55,6,0	1/1:4,0:5:3.54:42,4,0	1/1:1,0:1:2.99:24,3,0
chr10	31669941	.	C	CT	4506.28	PASS	AB=0.992;AC=46;AF=0.821;AN=56;BaseQRankSum=-4.226;DP=539;FS=111.966;HRun=2;HaplotypeScore=81.1435;InbreedingCoeff=0.3282;MQ=63.59;MQ0=21;MQRankSum=1.418;QD=9.01;ReadPosRankSum=1.261;VQSLOD=1.2263;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:31,0:30:17.46:63,0,17	1/1:1,7:8:15.05:215,15,0	0/0:27,0:13:18.28:0,18,198	0/0:12,0:5:9.16:0,9,103	1/1:2,24:26:60.17:837,60,0	1/1:2,30:32:72.24:1026,72,0	1/1:3,13:14:29.34:427,29,0	1/1:29,0:29:39.46:230,39,0	1/1:0,13:12:27.09:386,27,0	0/1:22,0:22:0.47:108,0,0	1/1:20,0:20:11.74:34,12,0	1/1:15,0:15:3.17:25,3,0	1/1:19,0:19:11.50:43,11,0	1/1:21,0:21:3.54:70,4,0	1/1:0,13:13:36.12:514,36,0	1/1:21,0:21:8.79:44,9,0	0/1:21,0:20:1.87:9,0,2	0/1:19,1:17:1.58:29,0,2	1/1:16,0:16:17.47:86,17,0	1/1:26,0:26:20.34:102,20,0	1/1:18,0:17:4.10:17,4,0	1/1:12,0:12:4.31:15,4,0	1/1:13,0:13:5.86:17,6,0	0/1:14,0:14:3.30:3,0,5	1/1:23,0:23:22.95:105,23,0	1/1:18,0:18:17.66:83,18,0	0/1:28,0:28:0.64:14,0,1	1/1:5,0:5:0.13:2,0,0
chr10	31670141	.	T	TA	5144.65	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-12.169;DP=658;FS=2.632;HRun=3;HaplotypeScore=62.7109;InbreedingCoeff=0.9997;MQ=77.90;MQ0=0;MQRankSum=-1.577;QD=36.49;ReadPosRankSum=1.138;VQSLOD=5.4991;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:90.26:0,90,1068	1/1:1,11:12:27.09:378,27,0	0/0:23,0:23:66.13:0,66,760	0/0:19,0:18:45.13:0,45,531	1/1:2,27:29:72.20:986,72,0	1/1:1,33:34:93.31:1302,93,0	1/1:1,22:23:60.20:840,60,0	0/0:33,0:33:90.25:0,90,1050	1/1:0,24:24:66.22:924,66,0	0/0:24,0:24:69.21:0,69,828	0/0:22,0:22:63.18:0,63,743	0/0:21,0:21:60.18:0,60,720	0/0:20,0:20:60.18:0,60,719	0/0:25,0:25:72.22:0,72,864	1/1:1,18:19:51.17:714,51,0	0/0:13,0:13:36.10:0,36,420	0/0:25,0:25:75.23:0,75,899	0/0:24,0:24:69.19:0,69,805	0/0:25,0:25:69.20:0,69,818	0/0:22,0:22:57.16:0,57,673	0/0:27,0:27:78.22:0,78,923	0/0:32,0:32:90.26:0,90,1068	0/0:17,0:17:45.14:0,45,540	0/0:25,0:25:69.18:0,69,813	0/0:24,0:24:72.22:0,72,864	0/0:23,0:23:66.20:0,66,792	0/0:30,0:30:90.26:0,90,1069	0/0:12,0:12:36.08:0,36,417
chr10	31670315	.	CA	C	5399.22	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=15.047;DP=691;FS=0.000;HRun=1;HaplotypeScore=90.6737;InbreedingCoeff=0.9967;MQ=84.22;MQ0=0;MQRankSum=-3.442;QD=36.73;ReadPosRankSum=4.571;VQSLOD=5.0408;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,114,1770	1/1:0,6:6:15.05:209,15,0	0/0:31,0:31:89.05:0,89,1274	0/0:27,0:27:81.26:0,81,1220	1/1:0,29:29:87.29:1215,87,0	1/1:0,26:26:66.22:918,66,0	1/1:0,32:32:81.27:1132,81,0	0/0:34,0:34:99:0,102,1624	1/1:0,28:28:72.24:1004,72,0	0/0:22,0:22:63.20:0,63,962	0/0:19,0:19:57.19:0,57,911	0/0:24,0:24:72.22:0,72,1098	0/0:22,0:22:66.19:0,66,994	0/0:31,0:31:90.26:0,90,1389	1/1:0,26:26:66.22:922,66,0	0/0:13,0:13:39.13:0,39,624	0/0:30,0:30:90.26:0,90,1389	0/0:13,0:13:39.13:0,39,623	0/0:18,0:18:48.16:0,48,760	0/0:26,0:26:78.25:0,78,1215	0/0:42,0:42:99:0,123,1935	0/0:37,0:37:99:0,111,1767	0/0:14,0:14:42.13:0,42,641	0/0:23,0:23:66.21:0,66,1031	0/0:23,0:23:69.24:0,69,1094	0/0:19,0:19:54.18:0,54,864	0/0:21,0:21:63.21:0,63,981	0/0:17,0:17:51.08:0,51,706
chr10	31672126	.	A	AT	5910.18	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=7.719;DP=802;FS=0.676;HRun=5;HaplotypeScore=89.4835;InbreedingCoeff=0.9983;MQ=83.95;MQ0=0;MQRankSum=-3.963;QD=33.97;ReadPosRankSum=0.848;VQSLOD=4.7040;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:59,0:59:99:0,168,1777	1/1:0,7:7:18.06:237,18,0	0/0:30,0:30:75.16:0,75,788	0/0:18,0:19:41.98:0,42,419	1/1:6,28:34:81.18:1026,81,0	1/1:3,25:28:69.22:908,69,0	1/1:0,30:30:87.28:1135,87,0	0/0:27,0:27:69.17:0,69,742	1/1:0,36:36:99:1342,102,0	0/0:31,0:31:84.21:0,84,903	0/0:25,0:25:72.18:0,72,774	0/0:22,0:22:57.14:0,57,613	0/0:33,0:33:90.21:0,90,959	0/0:37,0:37:99:0,111,1192	1/1:5,34:39:96.31:1263,96,0	0/0:30,1:31:47.74:0,48,863	0/0:22,0:22:66.17:0,66,709	0/0:17,0:17:42.80:0,43,480	0/0:18,0:18:48.12:0,48,516	0/0:34,0:34:99:0,99,1064	0/0:42,0:42:99:0,114,1215	0/0:27,0:27:78.18:0,78,830	0/0:31,0:31:87.22:0,87,935	0/0:27,0:26:75.19:0,75,806	0/0:18,0:18:54.14:0,54,580	0/0:32,0:32:93.23:0,93,1000	0/0:27,0:27:78.20:0,78,838	0/0:19,0:19:51.13:0,51,548
chr10	31672461	.	A	AGATACCG	8956.72	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=10.292;DP=703;FS=0.443;HRun=0;HaplotypeScore=163.8406;InbreedingCoeff=0.9966;MQ=88.94;MQ0=0;MQRankSum=-13.891;QD=66.84;ReadPosRankSum=2.205;VQSLOD=4.9867;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,102,2849	1/1:0,6:8:15.05:592,15,0	0/0:21,0:21:60.16:0,60,1407	0/0:37,0:37:99:0,105,2715	1/1:1,17:26:32.90:1257,33,0	1/1:0,12:16:30.10:1179,30,0	1/1:0,16:24:33.11:1238,33,0	0/0:31,0:31:87.28:0,87,2354	1/1:0,25:29:60.18:2223,60,0	0/0:25,0:25:72.25:0,72,2001	0/0:24,0:24:72.22:0,72,1784	0/0:20,0:20:60.21:0,60,1653	0/0:18,0:18:51.16:0,51,1328	0/0:27,0:27:72.23:0,72,1940	1/1:1,21:31:63.22:2468,63,0	0/0:25,0:25:75.23:0,75,1977	0/0:34,0:34:99:0,102,2664	0/0:19,0:19:54.14:0,54,1346	0/0:20,0:20:60.18:0,60,1550	0/0:27,0:27:81.24:0,81,2042	0/0:42,0:42:99:0,126,3229	0/0:18,0:18:54.19:0,54,1500	0/0:14,0:14:42.13:0,42,1080	0/0:19,0:19:54.19:0,54,1501	0/0:20,0:20:60.19:0,60,1616	0/0:30,0:30:84.27:0,84,2214	0/0:42,0:42:99:0,126,3252	0/0:19,0:19:54.17:0,54,1404
chr10	31673023	.	CTTAA	C	3028.65	PASS	AB=0.947;AC=13;AF=0.232;AN=56;BaseQRankSum=12.623;DP=536;FS=4.586;HRun=0;HaplotypeScore=99.9554;InbreedingCoeff=0.9144;MQ=90.07;MQ0=0;MQRankSum=-12.105;QD=29.99;ReadPosRankSum=2.702;VQSLOD=3.5567;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:78.22:0,78,1959	1/1:0,7:8:21.07:407,21,0	0/0:28,0:27:78.21:0,78,1770	0/0:21,0:21:50.55:0,51,1219	1/1:1,19:20:42.12:526,42,0	1/1:0,14:14:39.13:732,39,0	1/1:1,12:13:27.09:482,27,0	0/0:34,0:34:96.33:0,96,2448	1/1:2,13:15:27.09:502,27,0	0/0:19,0:19:57.19:0,57,1362	0/0:10,0:10:30.10:0,30,759	0/0:25,0:25:72.25:0,72,1931	0/0:21,0:21:63.22:0,63,1548	0/0:24,0:24:69.24:0,69,1746	1/1:1,12:13:30.10:562,30,0	0/1:17,1:18:6.90:7,0,1259	0/0:28,0:28:81.28:0,81,2141	0/0:15,0:15:42.14:0,42,1139	0/0:18,0:18:54.18:0,54,1432	0/0:15,0:15:42.13:0,42,1000	0/0:35,0:35:99:0,99,2553	0/0:15,0:15:45.15:0,45,974	0/0:14,0:14:42.14:0,42,1069	0/0:18,0:18:51.18:0,51,1390	0/0:19,0:19:57.20:0,57,1450	0/0:19,0:19:57.20:0,57,1508	0/0:20,0:20:60.19:0,60,1411	0/0:9,0:9:27.09:0,27,706
chr10	31674015	.	A	AT	4300.67	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=6.857;DP=579;FS=14.343;HRun=0;HaplotypeScore=66.0203;InbreedingCoeff=0.9988;MQ=71.98;MQ0=1;MQRankSum=-3.716;QD=39.10;ReadPosRankSum=3.078;VQSLOD=4.0246;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:87.28:0,87,1196	1/1:0,7:7:21.07:328,21,0	0/0:15,0:14:40.89:0,41,507	0/0:20,0:17:47.92:0,48,587	1/1:0,20:20:45.15:703,45,0	1/1:0,19:19:57.19:882,57,0	1/1:0,27:27:66.22:1029,66,0	0/0:39,0:39:99:0,114,1546	1/1:0,20:20:51.17:797,51,0	0/0:20,0:20:57.19:0,57,790	0/0:16,0:16:48.15:0,48,642	0/0:20,0:20:48.14:0,48,626	0/0:18,0:18:41.96:0,42,554	0/0:24,0:24:63.20:0,63,863	1/1:0,17:16:36.12:562,36,0	0/0:23,0:23:60.20:0,60,839	0/0:22,0:22:45.15:0,45,628	0/0:28,0:28:65.98:0,66,902	0/0:29,0:29:87.27:0,87,1184	0/0:19,0:19:57.15:0,57,759	0/0:22,0:22:66.18:0,66,857	0/0:20,0:20:58.44:0,58,799	0/0:11,0:11:27.08:0,27,361	0/0:31,0:31:81.27:0,81,1132	0/0:14,0:14:42.13:0,42,573	0/0:22,0:22:63.19:0,63,847	0/0:12,0:12:33.11:0,33,461	0/0:11,0:11:33.11:0,33,461
chr10	31674187	.	CATAAA	C	355.23	PASS	AB=0.667;AC=9;AF=0.167;AN=54;BaseQRankSum=4.443;DP=404;FS=8.291;HRun=0;HaplotypeScore=67.5107;InbreedingCoeff=0.6192;MQ=50.84;MQ0=40;MQRankSum=-4.276;QD=13.16;ReadPosRankSum=1.000;VQSLOD=1.3773;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:22:51.09:0,51,1422	1/1:0,3:3:6.02:124,6,0	0/0:20,0:2:6.02:0,6,99	0/0:9,0:3:8.97:0,9,144	1/1:6,7:9:2.54:61,3,0	1/1:1,3:4:3.01:62,3,0	./.	0/0:25,0:17:45.15:0,45,1299	0/1:2,2:4:51.72:115,0,52	0/0:19,0:16:45.15:0,45,1317	0/0:18,0:17:32.98:0,33,1014	0/0:14,0:13:33.11:0,33,1010	0/0:17,0:14:36.12:0,36,1093	0/0:15,0:13:27.09:0,27,829	1/1:1,2:2:6.02:124,6,0	0/0:17,0:15:39.13:0,39,1122	0/0:36,0:34:54.01:0,54,1587	0/0:27,0:24:57.06:0,57,1705	0/0:21,0:16:42.14:0,42,1288	0/0:15,0:15:36.12:0,36,1096	0/0:21,0:20:30.10:0,30,892	0/0:6,0:5:9.03:0,9,226	0/0:17,0:15:33.11:0,33,1014	0/0:16,0:16:27.09:0,27,830	0/0:11,0:9:24.08:0,24,738	0/0:14,0:9:27.09:0,27,778	0/0:8,0:7:18.06:0,18,553	0/0:2,0:2:6.02:0,6,184
chr10	31674206	.	T	TAAA	575.83	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=6.084;DP=332;FS=2.215;HRun=0;HaplotypeScore=53.8680;InbreedingCoeff=0.8031;MQ=59.15;MQ0=14;MQRankSum=-5.947;QD=25.04;ReadPosRankSum=-1.663;VQSLOD=2.6849;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:20:42.13:0,42,711	1/1:0,3:3:9:134,9,0	0/0:24,0:7:15.50:0,15,210	0/0:11,0:5:6.02:0,6,79	1/1:5,4:8:12.45:224,12,0	1/1:1,4:6:15.04:233,15,0	1/1:0,1:1:3.01:59,3,0	0/0:23,0:19:57.20:0,57,1034	0/0:1,0:1:0:0,0,0	0/0:12,0:12:36.10:0,36,580	0/0:15,0:15:36.12:0,36,653	0/0:10,0:10:30.10:0,30,544	0/0:15,0:13:36.12:0,36,651	0/0:10,0:10:27.09:0,27,455	1/1:1,2:3:5.49:77,5,0	0/0:13,0:12:33.10:0,33,584	0/0:36,0:34:72.23:0,72,1238	0/0:22,0:20:50.78:0,51,819	0/0:20,0:18:54.17:0,54,951	0/0:7,0:7:21.06:0,21,351	0/0:10,0:10:27.09:0,27,479	0/0:1,0:1:3.01:0,3,56	0/0:9,0:9:24.08:0,24,422	0/0:14,0:14:33.11:0,33,600	0/0:10,0:10:27.09:0,27,469	0/0:12,0:11:33.11:0,33,589	0/0:5,0:5:15.05:0,15,280	0/0:5,0:5:15.05:0,15,277
chr10	31674340	.	CAACAACAACAAAAAA	C	4632.34	PASS	AB=0.540;AC=27;AF=0.643;AN=42;BaseQRankSum=-2.526;DP=269;FS=1.641;HRun=0;HaplotypeScore=84.3545;InbreedingCoeff=0.7256;MQ=54.85;MQ0=9;MQRankSum=-2.967;QD=25.45;ReadPosRankSum=3.518;VQSLOD=2.8767;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:4,23:26:13.49:70,0,13	./.	0/0:6,0:2:2.74:0,3,12	0/0:7,0:4:8.93:0,9,72	./.	./.	./.	0/0:17,0:16:41.18:0,41,537	./.	1/1:0,11:10:27.07:608,27,0	1/1:0,9:9:18.05:308,18,0	1/1:3,7:6:9.03:308,9,0	1/1:0,5:5:9.03:385,9,0	1/1:1,8:6:6.02:267,6,0	./.	./.	1/1:1,35:35:15.05:665,15,0	1/1:2,16:17:12.01:422,12,0	0/0:17,0:17:51.13:0,51,583	0/0:14,0:14:31.94:0,32,352	0/0:8,0:7:17.87:0,18,161	1/1:1,2:3:8.85:89,9,0	1/1:3,0:3:5.89:37,6,0	1/1:14,0:13:28.26:404,28,0	1/1:0,14:14:15.01:361,15,0	1/1:0,15:14:30.04:687,30,0	0/0:10,0:8:12.51:0,13,139	1/1:1,7:7:2.98:21,3,0
chr10	31674343	.	CAACAACAA	C	3038.54	PASS	AB=1.000;AC=30;AF=0.714;AN=42;BaseQRankSum=-1.715;DP=266;FS=9.737;HRun=0;HaplotypeScore=68.2172;InbreedingCoeff=0.3992;MQ=55.03;MQ0=9;MQRankSum=-0.567;QD=13.27;ReadPosRankSum=-0.530;VQSLOD=0.9048;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:25:0.98:6,1,0	./.	0/0:4,0:1:1.25:0,1,3	0/0:5,0:4:5.50:0,5,37	./.	./.	./.	1/1:19,0:18:35.83:409,36,0	./.	1/1:11,0:10:1.97:107,2,0	0/1:9,0:9:15.61:60,0,16	1/1:10,0:6:9:132,9,0	1/1:5,0:5:9.03:150,9,0	1/1:9,0:6:6.02:111,6,0	./.	./.	1/1:36,0:35:15.05:274,15,0	1/1:17,0:15:9.03:167,9,0	1/1:1,16:17:47.59:625,48,0	1/1:1,13:14:29.88:354,30,0	1/1:9,0:8:20.94:232,21,0	0/0:2,0:2:2.29:0,2,8	0/0:3,0:3:1.96:0,2,6	0/0:14,0:13:0.87:0,1,23	1/1:14,0:14:3.60:103,4,0	1/1:15,0:14:1.99:86,2,0	1/1:0,10:8:11.94:338,12,0	0/1:8,0:7:0:0,0,0
chr10	31674351	.	A	AC	1014.83	PASS	AB=1.000;AC=13;AF=0.325;AN=40;BaseQRankSum=-6.410;DP=264;FS=4.276;HRun=0;HaplotypeScore=55.9365;InbreedingCoeff=0.4215;MQ=55.14;MQ0=6;MQRankSum=3.397;QD=9.95;ReadPosRankSum=-3.574;VQSLOD=2.1088;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:25:1.53:0,2,6	./.	0/0:3,0:1:1.25:0,1,3	0/0:5,0:3:5.37:0,5,37	./.	./.	./.	1/1:6,16:21:37.67:435,38,0	./.	0/0:11,0:10:4.88:0,5,20	0/0:9,0:9:11.71:0,12,38	0/0:9,0:6:4.44:0,4,15	0/0:5,0:5:6.66:0,7,21	0/0:9,0:6:4.44:0,4,15	./.	./.	0/0:36,0:35:11.10:0,11,36	0/0:17,0:15:6.66:0,7,22	1/1:17,0:17:38.75:347,39,0	0/1:14,0:14:16.30:136,0,16	1/1:2,8:8:17.76:180,18,0	0/0:2,0:2:2.37:0,2,8	1/1:2,0:2:2.68:11,3,0	0/1:11,0:10:8.14:8,0,8	0/0:14,0:14:6.81:0,7,22	0/1:15,0:14:4.56:5,0,7	1/1:11,0:9:7.91:30,8,0	./.
chr10	31674413	.	A	AG	52.27	PASS	AB=0.890;AC=7;AF=0.140;AN=50;BaseQRankSum=3.995;DP=364;FS=6.148;HRun=0;HaplotypeScore=44.3357;InbreedingCoeff=0.2390;MQ=67.12;MQ0=31;MQRankSum=-2.852;QD=1.19;ReadPosRankSum=-1.450;VQSLOD=0.3875;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:28:54.09:0,54,729	./.	0/0:27,0:8:14.66:0,15,231	0/0:41,0:12:16.90:0,17,166	1/1:6,1:3:4.26:50,4,0	0/0:1,0:1:3.01:0,3,37	1/1:2,1:2:3.01:47,3,0	0/0:18,0:16:44.91:0,45,511	./.	0/0:14,0:13:36.11:0,36,488	0/0:12,0:10:24.01:0,24,293	0/0:5,0:4:9.03:0,9,126	0/1:5,1:6:31.68:32,0,123	0/0:11,1:11:21.04:0,21,267	0/0:1,0:1:2.74:0,3,12	0/0:6,1:6:9.03:0,9,126	0/0:43,0:42:66.07:0,66,873	0/0:39,0:37:77.29:0,77,1050	0/0:17,0:13:39.13:0,39,545	0/1:10,1:9:26.31:26,0,219	0/1:15,2:13:16.75:17,0,347	./.	0/0:5,0:4:9.03:0,9,123	0/0:7,0:6:14.88:0,15,184	0/0:12,0:12:18.02:0,18,229	0/0:8,0:7:18.06:0,18,252	0/0:6,0:4:12.04:0,12,167	0/0:7,0:7:3:0,3,27
chr10	31674536	.	A	AAAT	1825.54	PASS	AB=1.000;AC=14;AF=0.259;AN=54;BaseQRankSum=7.706;DP=401;FS=0.000;HRun=0;HaplotypeScore=68.2563;InbreedingCoeff=0.7758;MQ=82.28;MQ0=4;MQRankSum=-3.067;QD=12.33;ReadPosRankSum=0.228;VQSLOD=2.8831;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:57.19:0,57,870	1/1:0,3:4:8.86:98,9,0	0/1:48,0:21:3.75:4,0,276	0/1:47,0:24:33.28:33,0,352	1/1:1,11:13:24.08:460,24,0	1/1:1,13:14:33.11:692,33,0	1/1:3,5:8:15.03:279,15,0	0/0:26,0:26:75.24:0,75,1122	1/1:0,4:5:6.02:127,6,0	0/0:6,0:6:18.04:0,18,228	0/0:12,0:12:33.10:0,33,480	0/0:12,0:12:36.12:0,36,565	0/0:5,0:5:15.03:0,15,194	0/0:9,0:9:27.05:0,27,379	1/1:2,6:9:15.05:311,15,0	0/0:6,0:6:18.05:0,18,263	0/0:27,0:27:69.17:0,69,964	0/0:23,0:22:63.20:0,63,958	0/0:22,0:22:63.18:0,63,909	0/0:8,0:8:21.07:0,21,328	0/0:8,0:8:24.06:0,24,323	./.	0/0:3,0:3:9.03:0,9,142	0/0:11,0:10:30.09:0,30,444	0/0:14,0:14:42.14:0,42,660	0/0:15,0:15:45.15:0,45,689	0/0:12,0:12:36.11:0,36,536	0/0:13,0:13:39.13:0,39,614
chr10	31676614	.	GTTTT	G	3980	PASS	AB=0.947;AC=13;AF=0.232;AN=56;BaseQRankSum=-13.056;DP=641;FS=2.709;HRun=10;HaplotypeScore=165.4618;InbreedingCoeff=0.8857;MQ=63.66;MQ0=6;MQRankSum=0.489;QD=25.19;ReadPosRankSum=-3.769;VQSLOD=-0.2145;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:68.06:0,68,961	1/1:1,5:6:9.02:126,9,0	0/0:15,0:11:23.06:0,23,435	0/0:16,0:12:32.69:0,33,576	1/1:3,21:23:50.97:723,51,0	1/1:4,30:33:69.17:1087,69,0	1/1:3,16:18:30.09:479,30,0	0/0:26,0:26:67.06:0,67,831	1/1:2,28:30:48.16:777,48,0	0/0:28,0:28:21.26:0,21,627	0/0:18,0:18:46.37:0,46,570	0/0:20,0:20:54.17:0,54,661	0/0:27,0:27:42.27:0,42,722	0/0:20,0:20:34.40:0,34,541	1/1:1,26:27:48.16:771,48,0	0/1:17,0:18:16.66:17,0,414	0/0:24,0:24:28.15:0,28,585	0/0:30,0:30:64.59:0,65,861	0/0:17,0:15:37.86:0,38,597	0/0:25,0:25:71.54:0,72,1157	0/0:11,0:11:26.45:0,26,423	0/0:24,0:24:18.44:0,18,571	0/0:16,0:16:20.43:0,20,374	0/0:19,0:19:34.55:0,35,480	0/0:17,0:17:38.05:0,38,518	0/0:34,0:34:25.65:0,26,777	0/0:42,0:42:99:0,110,1767	0/0:18,0:18:42.70:0,43,592
chr10	31676616	.	T	TG	4487.03	PASS	AB=1.000;AC=18;AF=0.321;AN=56;BaseQRankSum=-15.299;DP=636;FS=10.540;HRun=0;HaplotypeScore=128.7640;InbreedingCoeff=0.3347;MQ=65.28;MQ0=6;MQRankSum=0.565;QD=13.89;ReadPosRankSum=-5.258;VQSLOD=4.1112;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:35,0:35:28.14:28,0,94	0/0:6,0:6:11.75:0,12,77	0/0:14,0:11:23.68:0,24,253	0/0:17,0:14:36.07:0,36,419	0/0:24,0:23:36.45:0,36,269	0/0:33,0:32:74.60:0,75,435	0/0:19,0:18:27.73:0,28,185	1/1:1,26:27:78.17:937,78,0	0/0:30,0:30:52.41:0,52,308	0/1:28,0:28:22.67:24,0,23	0/0:16,0:16:31.63:0,32,101	0/0:20,0:20:5.08:0,5,48	0/0:26,0:26:39.84:0,40,115	0/0:21,0:21:30.28:0,30,84	0/0:26,0:26:38.74:0,39,238	0/1:18,0:18:19.75:34,0,20	0/1:23,0:23:13.61:14,0,35	0/1:31,0:31:11.66:12,0,69	1/1:2,14:14:42.05:491,42,0	1/1:0,25:25:72.18:953,72,0	1/1:0,12:12:27.09:368,27,0	0/0:23,0:23:36.91:0,37,123	0/1:16,0:16:36.05:56,0,36	0/0:19,0:19:32.25:0,32,92	0/1:17,0:17:24.35:24,0,30	0/1:34,0:34:25.90:26,0,31	1/1:0,41:41:99:1520,111,0	0/0:18,0:18:30.68:0,31,86
chr10	31677953	.	G	GT	2903.84	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=-9.300;DP=785;FS=2.916;HRun=8;HaplotypeScore=84.4124;InbreedingCoeff=0.8896;MQ=75.30;MQ0=5;MQRankSum=1.625;QD=15.05;ReadPosRankSum=-0.310;VQSLOD=3.7939;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:26:74.93:0,75,665	0/0:7,0:7:15:0,15,137	0/1:69,0:38:10.90:11,0,270	0/0:74,0:43:38.33:0,38,321	0/0:28,0:28:71.98:0,72,654	0/0:33,0:33:90.05:0,90,823	0/0:27,0:27:68.96:0,69,610	1/1:7,28:35:84.22:947,84,0	0/0:23,0:23:64.92:0,65,563	0/0:28,1:29:43.42:0,43,651	0/0:28,0:28:69:0,69,621	0/0:20,0:20:57.02:0,57,521	0/0:26,0:26:69.02:0,69,631	0/0:16,0:16:38.99:0,39,352	0/0:27,0:27:72.01:0,72,652	0/0:19,0:19:51.03:0,51,466	0/0:37,0:37:99:0,102,909	0/0:24,0:24:44.17:0,44,540	1/1:5,12:17:33.05:360,33,0	1/1:4,25:31:83.83:898,84,0	1/1:1,11:12:18.05:208,18,0	0/0:26,0:26:72.03:0,72,655	0/0:21,0:21:60.02:0,60,544	0/0:18,0:18:50.97:0,51,454	0/0:21,0:21:57.02:0,57,518	0/0:33,0:33:93.03:0,93,846	1/1:2,26:28:57.17:658,57,0	0/0:27,0:27:74.99:0,75,676
chr10	31678680	.	CT	C	3775.89	PASS	AB=0.746;AC=22;AF=0.393;AN=56;BaseQRankSum=8.048;DP=543;FS=9.744;HRun=11;HaplotypeScore=60.0273;InbreedingCoeff=0.8301;MQ=71.36;MQ0=3;MQRankSum=-0.071;QD=15.73;ReadPosRankSum=2.122;VQSLOD=4.0590;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,2:26:20.19:0,20,604	1/1:1,10:11:15.78:208,16,0	0/0:23,0:12:29.52:0,30,225	0/0:20,0:14:16.33:0,16,170	0/1:8,19:28:34:362,0,34	1/1:3,23:26:33.94:485,34,0	1/1:4,13:17:41.75:333,42,0	1/1:8,13:21:36.72:297,37,0	1/1:4,18:22:12.95:313,13,0	0/0:17,0:17:27.37:0,27,266	0/0:25,0:26:62.98:0,63,647	0/0:16,0:16:8.51:0,9,289	0/0:14,2:16:20.49:0,20,422	0/0:16,0:16:11.26:0,11,308	1/1:8,15:23:41.89:345,42,0	0/1:9,1:10:6.60:7,0,142	0/0:19,0:18:48.06:0,48,483	0/0:18,2:20:29.40:0,29,492	1/1:7,12:19:9.89:287,10,0	1/1:7,28:36:84.13:672,84,0	1/1:2,5:7:14.98:123,15,0	0/0:15,0:15:42.11:0,42,447	0/0:22,0:22:54.13:0,54,568	0/0:11,0:11:24.05:0,24,249	0/0:20,0:20:49.19:0,49,490	0/0:26,0:26:53.70:0,54,544	1/1:4,16:20:41.93:345,42,0	0/0:10,0:10:24.06:0,24,255
chr10	31680694	.	AAC	A	103.92	PASS	AB=0.947;AC=11;AF=0.196;AN=56;BaseQRankSum=-3.256;DP=180;FS=9.204;HRun=0;HaplotypeScore=85.4188;InbreedingCoeff=-0.0284;MQ=49.90;MQ0=1;MQRankSum=1.715;QD=1.53;ReadPosRankSum=-2.953;VQSLOD=0.2966;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:14,3:17:19.52:83,0,20	0/0:8,0:8:1.20:0,1,46	0/1:6,0:6:20.29:20,0,48	0/0:5,0:5:8.54:0,9,34	0/0:7,0:7:7.36:0,7,21	0/0:8,0:7:5.56:0,6,14	0/0:6,0:6:8.20:0,8,31	0/1:4,0:2:0.84:19,0,1	0/0:6,0:6:6.23:0,6,45	0/1:8,0:8:14.31:29,0,14	0/0:8,0:8:9.68:0,10,35	0/0:2,0:2:1.59:0,2,5	0/0:3,0:3:4.36:0,4,11	0/1:4,0:4:4.83:10,0,5	0/0:7,0:7:2.19:0,2,11	0/0:5,0:5:5.49:0,5,13	0/0:7,0:7:7.70:0,8,33	0/0:10,0:10:1.42:0,1,40	0/1:6,0:5:11.31:14,0,11	0/0:6,0:6:7.14:0,7,20	0/1:6,1:7:11.81:12,0,40	0/0:7,0:7:12.46:0,12,36	0/1:8,0:8:6.54:22,0,7	1/1:4,0:4:2.51:6,3,0	0/0:5,0:5:8.11:0,8,23	0/1:3,1:4:5.72:19,0,6	0/0:9,0:8:6.31:0,6,18	0/0:3,0:3:2.80:0,3,8
chr10	31680706	.	CA	C	2989.20	PASS	AB=0.667;AC=49;AF=0.942;AN=52;BaseQRankSum=-2.426;DP=150;FS=7.314;HRun=4;HaplotypeScore=62.5678;InbreedingCoeff=0.1443;MQ=41.25;MQ0=0;MQRankSum=-2.426;QD=20.76;ReadPosRankSum=1.565;VQSLOD=2.6408;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,10:11:24.06:266,24,0	1/1:0,8:8:23.96:227,24,0	0/1:2,2:4:25.32:57,0,25	0/0:2,0:2:2.37:0,2,8	1/1:1,3:4:2.80:13,3,0	1/1:0,9:8:21.05:227,21,0	1/1:1,5:6:15.03:152,15,0	./.	1/1:0,4:4:12.03:126,12,0	1/1:2,6:8:18.03:190,18,0	1/1:1,6:7:9:82,9,0	./.	1/1:0,2:2:6.01:58,6,0	1/1:1,3:4:9.01:85,9,0	1/1:1,6:7:17.97:171,18,0	1/1:0,5:5:15.03:152,15,0	1/1:0,6:6:15.03:151,15,0	1/1:0,10:10:27.08:307,27,0	1/1:1,2:3:6.02:68,6,0	1/1:1,5:6:6.01:58,6,0	1/1:0,5:5:9.02:94,9,0	1/1:2,3:5:3:29,3,0	1/1:0,8:8:9.01:85,9,0	1/1:1,2:3:3.01:36,3,0	1/1:1,5:6:11.82:98,12,0	1/1:0,2:2:6.02:65,6,0	1/1:0,9:8:21.05:221,21,0	1/1:0,2:2:6.02:66,6,0
chr10	31682165	.	G	GA	6221.81	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=17.443;DP=762;FS=10.208;HRun=2;HaplotypeScore=91.0451;InbreedingCoeff=0.9997;MQ=84.38;MQ0=0;MQRankSum=-1.792;QD=39.13;ReadPosRankSum=1.896;VQSLOD=4.5965;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,135,1660	1/1:0,16:16:48.16:691,48,0	0/0:26,0:25:66.19:0,66,799	0/0:31,0:31:67.03:0,67,864	1/1:2,19:21:54.14:754,54,0	1/1:1,29:30:84.28:1210,84,0	1/1:3,29:32:87.29:1234,87,0	0/0:32,0:32:84.26:0,84,1042	1/1:1,26:27:72.24:1037,72,0	0/0:33,0:33:96.29:0,96,1180	0/0:24,0:24:72.23:0,72,892	0/0:38,0:38:99:0,114,1400	0/0:10,0:10:27.06:0,27,319	0/0:36,0:36:99:0,105,1289	1/1:1,32:33:90.30:1296,90,0	0/0:24,0:24:69.22:0,69,855	0/0:31,0:31:87.27:0,87,1076	0/0:20,0:20:60.19:0,60,744	0/0:21,0:21:60.19:0,60,742	0/0:21,0:21:60.18:0,60,731	0/0:44,0:44:99:0,123,1510	0/0:29,0:29:84.25:0,84,1026	0/0:23,0:23:66.21:0,66,818	0/0:26,0:26:78.25:0,78,967	0/0:20,0:20:57.18:0,57,707	0/0:25,0:25:69.22:0,69,856	0/0:30,0:30:90.27:0,90,1103	0/0:11,0:11:33.10:0,33,409
chr10	31682648	.	C	CCTT	920.50	PASS	AB=0.589;AC=6;AF=0.107;AN=56;BaseQRankSum=1.465;DP=421;FS=3.030;HRun=0;HaplotypeScore=75.7810;InbreedingCoeff=-0.0263;MQ=63.00;MQ0=12;MQRankSum=1.331;QD=12.44;ReadPosRankSum=1.478;VQSLOD=2.7683;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:22:38.10:0,38,236	0/1:1,1:6:11.53:88,0,12	0/0:8,0:9:20.76:0,21,181	0/0:4,0:3:3.90:0,4,88	0/1:4,0:27:63.03:336,0,63	0/1:5,0:15:11.62:260,0,12	0/1:3,0:5:39.10:39,0,54	0/0:33,0:33:96.21:0,96,1535	0/1:1,0:9:4.70:196,0,5	0/0:7,0:26:73.18:0,73,508	0/0:2,0:15:38.28:0,38,242	0/0:1,0:9:20.42:0,20,119	0/0:3,0:4:8.85:0,9,59	0/0:4,0:10:29.59:0,30,237	0/1:4,0:11:40.51:125,0,41	0/0:3,0:6:17.59:0,18,113	0/0:6,0:26:52.77:0,53,374	0/0:5,0:25:58.80:0,59,360	0/0:17,0:17:45.08:0,45,643	0/0:12,0:12:30.02:0,30,462	0/0:7,0:7:18.05:0,18,299	0/0:0,0:3:8.83:0,9,53	0/0:1,0:8:11.79:0,12,79	0/0:0,0:5:5.88:0,6,35	0/0:1,0:30:82.13:0,82,491	0/0:2,0:15:44.03:0,44,278	0/0:26,0:25:69.19:0,69,1140	0/0:5,0:22:58.70:0,59,395
chr10	31684323	.	GCACA	G	7853.81	PASS	AB=0.629;AC=29;AF=0.518;AN=56;BaseQRankSum=-5.384;DP=581;FS=8.413;HRun=0;HaplotypeScore=145.7391;InbreedingCoeff=0.8316;MQ=55.99;MQ0=2;MQRankSum=1.444;QD=27.46;ReadPosRankSum=5.026;VQSLOD=4.1094;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:16,11:28:19.15:606,19,0	0/0:8,0:8:2.84:0,3,52	0/0:20,0:8:0:0,0,0	0/0:19,0:7:8.97:0,9,106	0/0:14,0:14:11.73:0,12,142	0/0:15,0:25:6.02:0,6,102	0/0:27,0:27:26.84:0,27,377	0/0:32,0:34:47.55:0,48,716	0/0:16,0:15:12.02:0,12,216	1/1:7,14:22:51.16:799,51,0	1/1:7,5:13:21.06:294,21,0	1/1:5,13:19:39.12:609,39,0	1/1:8,3:11:15.05:243,15,0	1/1:6,16:22:51.17:806,51,0	0/0:14,0:19:8.71:0,9,176	1/1:7,8:17:23.51:520,24,0	1/1:10,14:25:51.15:759,51,0	0/1:9,12:22:75.46:628,0,75	0/0:11,0:17:33.11:0,33,626	0/0:20,0:29:41.78:0,42,767	0/0:39,0:49:60.17:0,60,1054	1/1:8,5:15:24.08:368,24,0	1/1:5,9:14:21.06:320,21,0	1/1:17,19:36:54.08:776,54,0	1/1:5,8:16:17.49:384,17,0	1/1:8,7:16:33.09:472,33,0	0/0:8,0:17:38.77:0,39,543	1/1:0,5:6:18.05:271,18,0
chr10	31684368	.	G	GAC	4239.47	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-9.498;DP=723;FS=11.798;HRun=0;HaplotypeScore=188.4526;InbreedingCoeff=0.9970;MQ=57.31;MQ0=8;MQRankSum=0.603;QD=25.85;ReadPosRankSum=0.009;VQSLOD=5.1510;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:57.16:0,57,705	0/0:15,0:14:24.05:0,24,277	0/0:24,0:15:44.05:0,44,465	0/0:29,0:12:27.32:0,27,295	0/0:20,0:20:35.80:0,36,440	0/0:18,0:18:39.11:0,39,478	0/0:24,0:24:48.15:0,48,605	1/1:15,18:32:51.15:820,51,0	0/0:21,0:20:45.61:0,46,567	0/0:31,0:31:75.22:0,75,917	0/0:19,0:19:47.97:0,48,566	0/0:26,0:27:46.21:0,46,761	0/0:15,0:15:45.12:0,45,540	0/0:25,0:25:69.22:0,69,869	0/0:23,0:23:45.14:0,45,567	0/0:20,0:20:51.16:0,51,643	0/0:28,0:28:56.97:0,57,673	0/0:31,0:31:61.72:0,62,962	1/1:9,16:26:56.87:863,57,0	1/1:10,25:35:48.16:795,48,0	1/1:14,26:40:22.69:907,23,0	0/0:23,0:23:51.03:0,51,619	0/0:33,0:33:84.26:0,84,1046	0/0:39,0:37:54.15:0,54,665	0/0:23,0:24:54.16:0,54,668	0/0:24,0:24:66.21:0,66,828	1/1:7,21:28:19.34:854,19,0	0/0:10,0:10:30.10:0,30,378
chr10	31684395	.	TA	T	8837.99	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=7.308;DP=669;FS=8.082;HRun=8;HaplotypeScore=119.7063;InbreedingCoeff=0.9998;MQ=65.13;MQ0=1;MQRankSum=-3.972;QD=24.90;ReadPosRankSum=5.258;VQSLOD=3.8025;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,29:31:69.10:665,69,0	0/0:11,0:11:33.07:0,33,383	0/0:28,0:25:50.46:0,50,555	0/0:14,0:10:27.08:0,27,326	0/0:31,0:31:83.97:0,84,986	0/0:22,0:22:63.13:0,63,721	0/0:24,0:24:63.19:0,63,760	0/0:36,0:36:86.46:0,86,999	0/0:21,0:21:60.18:0,60,721	1/1:1,23:24:69.11:666,69,0	1/1:0,20:20:57.04:540,57,0	1/1:2,21:23:63.10:608,63,0	1/1:0,19:19:54.09:521,54,0	1/1:5,16:21:51.05:484,51,0	0/0:21,0:22:63.06:0,63,736	1/1:2,18:20:51.08:492,51,0	1/1:6,18:24:48.06:463,48,0	1/1:4,22:26:63.09:608,63,0	0/0:22,0:23:47.96:0,48,539	0/0:29,0:29:78.13:0,78,890	0/0:20,0:20:39.12:0,39,471	1/1:0,22:22:66.11:637,66,0	1/1:2,29:31:87.14:839,87,0	1/1:3,31:32:72.10:694,72,0	1/1:1,19:20:57.09:550,57,0	1/1:2,26:28:78.12:753,78,0	0/0:33,0:33:87.19:0,87,1005	1/1:1,11:12:33.05:319,33,0
chr10	31684888	.	GA	G	4268.93	PASS	AB=0.737;AC=38;AF=0.679;AN=56;BaseQRankSum=5.133;DP=582;FS=6.085;HRun=14;HaplotypeScore=65.1614;InbreedingCoeff=0.4886;MQ=57.65;MQ0=19;MQRankSum=0.465;QD=8.82;ReadPosRankSum=1.641;VQSLOD=4.0752;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,24:35:50.99:397,51,0	0/0:6,0:7:2.16:0,2,49	0/0:21,0:7:7.47:0,7,44	0/1:20,0:4:10.72:11,0,46	0/1:20,3:26:1.93:2,0,211	0/0:12,0:13:26.87:0,27,237	0/0:20,0:22:41.77:0,42,385	1/1:11,10:19:31.16:206,31,0	0/0:16,0:15:14.83:0,15,155	1/1:15,5:20:28.46:187,28,0	1/1:8,15:19:23.65:164,24,0	1/1:7,13:19:35.56:242,36,0	1/1:2,13:15:26.78:185,27,0	1/1:8,9:15:17.81:123,18,0	0/0:13,0:15:4.58:0,5,221	0/1:5,8:12:7.14:102,0,7	1/1:5,26:31:64.41:437,64,0	1/1:6,15:22:43.64:294,44,0	0/1:10,8:15:11.10:100,0,11	1/1:7,14:23:2.01:133,2,0	1/1:6,11:18:24.88:156,25,0	1/1:10,6:16:26.24:169,26,0	1/1:12,9:21:36.67:234,37,0	1/1:8,21:30:63.44:423,63,0	0/1:11,6:19:19.34:125,0,19	1/1:15,6:23:33.86:192,34,0	1/1:7,20:29:41.29:263,41,0	0/1:6,7:14:2.03:124,0,2
chr10	31684993	.	T	TTTTC	8615.32	PASS	AB=0.814;AC=34;AF=0.654;AN=52;BaseQRankSum=-6.011;DP=590;FS=0.548;HRun=0;HaplotypeScore=96.5003;InbreedingCoeff=0.6986;MQ=57.10;MQ0=5;MQRankSum=-1.388;QD=20.51;ReadPosRankSum=-1.565;VQSLOD=4.2533;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:22:15.03:190,15,0	0/0:8,0:9:9.02:0,9,119	./.	./.	0/0:30,0:30:27.08:0,27,379	1/1:12,10:22:24.08:556,24,0	0/1:16,5:22:35.31:131,0,35	0/1:30,0:29:0:0,0,0	1/1:9,5:14:6.02:140,6,0	0/1:19,13:33:3.68:732,0,4	1/1:12,6:18:18.53:381,19,0	1/1:9,7:16:24.08:525,24,0	0/1:16,7:23:27.73:331,0,28	1/1:11,5:17:18.06:408,18,0	0/0:7,0:17:18.02:0,18,168	1/1:10,6:17:15.05:349,15,0	1/1:11,5:16:30.10:629,30,0	1/1:19,7:26:45.15:971,45,0	0/0:30,0:28:31.35:0,31,499	0/0:32,0:32:51.07:0,51,656	0/0:11,0:11:15.05:0,15,229	1/1:14,9:23:15.05:345,15,0	1/1:11,12:25:33.11:764,33,0	1/1:11,8:19:29.58:521,30,0	1/1:23,2:33:24.08:420,24,0	1/1:11,13:24:33.11:735,33,0	0/0:30,0:29:42.13:0,42,620	1/1:10,8:19:21.07:488,21,0
chr10	31685271	.	GC	G	8747.80	PASS	AB=0.815;AC=51;AF=0.911;AN=56;BaseQRankSum=-2.189;DP=500;FS=10.757;HRun=1;HaplotypeScore=176.5421;InbreedingCoeff=0.4056;MQ=53.24;MQ0=21;MQRankSum=-2.659;QD=19.06;ReadPosRankSum=3.810;VQSLOD=3.9408;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,12:12:5.24:151,5,0	1/1:2,2:4:9.03:121,9,0	0/1:17,5:9:18.87:19,0,166	0/0:27,0:13:11.79:0,12,118	1/1:0,16:15:24.08:325,24,0	1/1:0,12:12:27.09:362,27,0	1/1:0,23:23:45.13:568,45,0	1/1:1,20:19:54.17:718,54,0	1/1:2,16:16:33.08:407,33,0	1/1:1,26:27:81.23:1021,81,0	1/1:0,6:6:2.11:78,2,0	1/1:2,20:24:22.24:329,22,0	1/1:2,10:11:6.02:72,6,0	1/1:0,19:19:8.98:251,9,0	1/1:0,26:26:60.19:771,60,0	1/1:0,19:18:29.18:327,29,0	1/1:2,16:18:24.50:277,24,0	1/1:1,5:7:18.05:214,18,0	1/1:3,12:15:42.10:503,42,0	1/1:0,17:18:20.76:260,21,0	1/1:7,31:36:22.82:304,23,0	1/1:2,8:9:5.66:70,6,0	1/1:0,8:9:2.92:42,3,0	0/0:1,12:13:0.68:0,1,2	1/1:0,20:20:13.42:242,13,0	1/1:1,21:22:66.18:775,66,0	1/1:1,11:12:24.05:267,24,0	1/1:0,10:10:24.04:276,24,0
chr10	31685276	.	GTGC	G	4470.37	PASS	AB=0.980;AC=46;AF=0.821;AN=56;BaseQRankSum=-0.628;DP=507;FS=21.232;HRun=0;HaplotypeScore=198.8075;InbreedingCoeff=0.1519;MQ=55.36;MQ0=21;MQRankSum=-1.875;QD=9.37;ReadPosRankSum=6.371;VQSLOD=2.4140;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:12:4.74:32,5,0	1/1:1,1:2:3.01:49,3,0	0/1:24,0:12:23.41:23,0,228	0/1:21,0:12:8.41:8,0,107	1/1:3,11:15:14.89:156,15,0	1/1:5,10:15:23.81:244,24,0	1/1:3,17:20:41.79:441,42,0	1/1:24,0:21:1.91:393,2,0	1/1:6,10:15:25.42:277,25,0	1/1:28,0:27:40:357,40,0	0/0:7,0:6:2.98:0,3,22	0/1:25,0:24:16.76:112,0,17	1/1:12,0:10:6.86:52,7,0	0/1:18,0:18:26.33:37,0,26	1/1:11,20:31:60.03:858,60,0	1/1:20,1:19:18.65:93,19,0	1/1:19,0:18:17.19:153,17,0	1/1:9,0:8:19.45:118,19,0	1/1:22,0:21:50.29:334,50,0	1/1:18,0:16:11.92:47,12,0	1/1:40,0:36:0.11:49,0,0	1/1:10,0:9:4.56:18,5,0	0/0:9,0:9:0.71:0,1,2	0/0:14,0:13:0.14:0,0,0	1/1:21,0:19:7.61:50,8,0	1/1:24,0:24:57.43:350,57,0	1/1:14,0:13:16.25:91,16,0	1/1:10,0:10:20.50:127,20,0
chr10	31685278	.	GC	G	7417.51	PASS	AB=0.716;AC=49;AF=0.875;AN=56;BaseQRankSum=-1.609;DP=462;FS=5.086;HRun=1;HaplotypeScore=171.9697;InbreedingCoeff=0.2608;MQ=57.34;MQ0=11;MQRankSum=-2.425;QD=16.71;ReadPosRankSum=4.235;VQSLOD=5.2931;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,8:12:1.76:103,2,0	1/1:1,1:2:3.01:40,3,0	0/1:16,5:11:99:102,0,140	0/1:14,2:12:40.13:40,0,54	1/1:12,2:13:14.28:111,14,0	1/1:11,3:14:22.09:172,22,0	1/1:18,2:20:42.46:355,42,0	1/1:1,16:18:51.14:646,51,0	1/1:12,4:15:24.24:206,24,0	1/1:0,14:22:66.20:830,66,0	0/0:0,4:5:2.04:0,2,6	1/1:2,12:23:19.24:303,19,0	1/1:0,9:9:9.03:116,9,0	1/1:0,7:17:5.97:208,6,0	1/1:21,8:29:55.95:665,56,0	1/1:1,7:18:26.17:286,26,0	1/1:1,13:18:21.53:255,22,0	1/1:2,3:8:23.10:272,23,0	1/1:1,15:21:57.17:725,57,0	1/1:3,7:13:17.72:198,18,0	1/1:4,24:33:15.97:184,16,0	1/1:0,7:9:6.02:68,6,0	0/1:1,6:8:0.09:0,0,0	0/0:0,8:13:0.21:0,0,1	1/1:1,9:19:10.41:197,10,0	1/1:0,10:23:69.20:815,69,0	1/1:1,9:14:21.06:241,21,0	1/1:0,5:10:24.06:279,24,0
chr10	31689423	.	GT	G	2112.87	PASS	AB=0.952;AC=23;AF=0.411;AN=56;BaseQRankSum=12.770;DP=563;FS=0.000;HRun=11;HaplotypeScore=64.8573;InbreedingCoeff=0.8545;MQ=77.42;MQ0=1;MQRankSum=-0.875;QD=8.77;ReadPosRankSum=2.781;VQSLOD=2.2999;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,1:31:60.80:0,61,834	1/1:2,1:9:15.22:60,15,0	0/0:18,0:18:33.04:0,33,336	0/0:9,0:9:15.04:0,15,160	1/1:6,1:30:16.43:101,16,0	1/1:2,0:17:28.51:82,29,0	1/1:3,0:20:34.62:100,35,0	1/1:10,22:32:33.90:485,34,0	1/1:3,0:19:30.55:88,31,0	0/0:21,1:22:32.50:0,32,550	0/1:16,1:20:4.48:4,0,283	0/0:27,3:31:28.73:0,29,688	0/0:15,1:18:23.28:0,23,423	0/0:20,1:25:35.19:0,35,539	1/1:7,14:21:9.95:288,10,0	0/0:22,0:22:63.14:0,63,659	0/0:27,1:28:50.35:0,50,710	0/0:12,0:12:30.01:0,30,298	1/1:9,10:19:1.26:214,1,0	1/1:2,12:14:4.15:152,4,0	1/1:1,14:15:12.97:313,13,0	0/0:16,0:16:42.08:0,42,427	0/0:13,2:15:14.42:0,14,339	0/0:17,0:17:48.08:0,48,500	0/0:21,0:21:60.13:0,60,629	0/0:25,0:25:57.13:0,57,595	1/1:3,21:24:27.94:436,28,0	0/0:9,1:12:5.11:0,5,219
chr10	31692086	.	T	TA	366.08	PASS	AB=1.000;AC=4;AF=0.071;AN=56;BaseQRankSum=-1.740;DP=478;FS=3.027;HRun=9;HaplotypeScore=49.2108;InbreedingCoeff=0.4333;MQ=64.28;MQ0=3;MQRankSum=1.986;QD=9.89;ReadPosRankSum=0.056;VQSLOD=1.7969;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:21:59.86:0,60,510	0/0:5,0:5:14.97:0,15,125	0/1:9,0:6:13.40:13,0,24	0/1:12,0:10:12.73:13,0,104	0/0:27,0:27:77.98:0,78,677	0/0:26,0:26:77.97:0,78,673	0/0:16,0:16:38.85:0,39,320	0/0:33,0:28:50.31:0,50,568	0/0:11,0:11:32.99:0,33,286	0/0:20,0:20:50.97:0,51,441	0/0:25,0:25:62.92:0,63,535	0/0:14,0:14:41.98:0,42,361	0/0:10,0:10:26.99:0,27,234	0/0:13,0:14:38.01:0,38,315	1/1:2,14:15:42.08:452,42,0	0/0:17,0:17:41.95:0,42,361	0/0:22,0:22:56.93:0,57,482	0/0:12,0:12:22.68:0,23,173	0/0:17,0:16:38.96:0,39,333	0/0:22,0:22:53.99:0,54,469	0/0:7,0:7:12:0,12,104	0/0:2,0:2:5.99:0,6,50	0/0:13,0:13:35.99:0,36,310	0/0:7,0:7:21:0,21,182	0/0:14,0:14:41.96:0,42,357	0/0:21,0:21:50.95:0,51,437	0/0:45,0:45:99:0,129,1116	0/0:19,0:19:56.91:0,57,485
chr10	31692684	.	GAGAA	G	2147.55	PASS	AB=0.995;AC=31;AF=0.554;AN=56;BaseQRankSum=8.492;DP=580;FS=36.449;HRun=0;HaplotypeScore=125.9716;InbreedingCoeff=0.3167;MQ=65.60;MQ0=9;MQRankSum=0.787;QD=5.36;ReadPosRankSum=-2.067;VQSLOD=0.4830;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:30:9.95:229,10,0	0/1:13,0:13:27:27,0,156	0/0:26,0:17:13.44:0,13,218	0/1:40,0:26:54.09:54,0,189	0/0:22,0:22:14.90:0,15,209	0/0:28,0:28:38.01:0,38,499	0/0:12,0:12:3.03:0,3,137	0/0:27,0:28:74.54:0,75,648	0/1:12,0:12:6.21:6,0,103	1/1:2,13:15:27.02:324,27,0	1/1:2,25:27:37.29:264,37,0	1/1:14,2:16:8.53:168,9,0	0/1:22,0:22:12.03:39,0,12	1/1:10,0:10:2.22:7,2,0	0/0:19,0:19:9.90:0,10,182	1/1:16,0:16:7.90:39,8,0	1/1:20,1:21:8.53:88,9,0	0/1:13,0:13:6.15:112,0,6	0/0:18,0:17:39.41:0,39,452	0/0:25,0:25:41.19:0,41,632	0/1:12,0:12:17.13:17,0,181	1/1:33,0:33:31.62:199,32,0	1/1:23,0:23:0.98:24,1,0	1/1:25,1:26:48.85:354,49,0	1/1:22,0:22:5.80:26,6,0	0/1:19,1:20:3.25:265,0,3	0/1:19,0:18:3.82:4,0,403	0/1:9,0:7:2.17:83,0,2
chr10	31692688	.	AAGAGAGAGAGAG	A	898.19	PASS	AB=0.738;AC=8;AF=0.154;AN=52;BaseQRankSum=2.333;DP=583;FS=5.647;HRun=0;HaplotypeScore=190.3949;InbreedingCoeff=0.3741;MQ=64.62;MQ0=13;MQRankSum=-4.442;QD=9.76;ReadPosRankSum=0.610;VQSLOD=2.0185;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:27:29.33:0,29,504	1/1:7,4:12:5.09:379,5,0	./.	./.	0/1:13,10:24:19.72:112,0,20	0/1:22,7:29:14.14:293,0,14	1/1:6,6:12:3.01:38,3,0	0/0:32,0:32:15.83:0,16,153	1/1:5,9:14:1.91:199,2,0	0/0:15,0:14:26.89:0,27,481	0/0:30,0:29:17.88:0,18,222	0/0:13,0:13:17.93:0,18,473	0/0:23,0:23:11.81:0,12,187	0/0:10,0:10:3.01:0,3,104	0/0:9,0:19:6.02:0,6,88	0/0:16,0:16:7.83:0,8,338	0/0:22,0:22:7.95:0,8,189	0/0:12,0:13:16.41:0,16,207	0/0:22,0:21:18.01:0,18,554	0/0:23,0:23:27.09:0,27,939	0/0:12,0:12:15.04:0,15,357	0/0:32,0:32:5.85:0,6,34	0/0:24,0:23:8.86:0,9,217	0/0:25,0:25:19.60:0,20,407	0/0:22,0:22:6.90:0,7,327	0/0:18,0:18:25.91:0,26,553	0/0:18,0:17:26.94:0,27,803	0/0:9,0:7:8.94:0,9,94
chr10	31697071	.	A	AT	8657.05	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-3.523;DP=492;FS=9.508;HRun=5;HaplotypeScore=66.3033;InbreedingCoeff=0.9870;MQ=71.21;MQ0=0;MQRankSum=-4.137;QD=31.37;ReadPosRankSum=5.391;VQSLOD=4.9119;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,18:20:45.15:592,45,0	0/0:7,0:7:18.04:0,18,193	0/0:12,0:12:14.99:0,15,286	0/0:8,0:8:14.22:0,14,187	0/0:23,0:23:56.85:0,57,595	0/0:17,0:17:39.08:0,39,411	0/0:13,0:13:36.07:0,36,378	0/0:37,0:37:87.19:0,87,921	0/0:12,0:12:33.06:0,33,340	1/1:3,21:24:63.20:826,63,0	1/1:1,24:25:72.19:928,72,0	1/1:1,5:6:12.04:158,12,0	1/1:3,16:19:57.17:735,57,0	1/1:1,9:10:24.08:316,24,0	0/0:13,0:13:39.10:0,39,419	1/1:2,12:14:30.10:395,30,0	1/1:1,33:34:81.26:1066,81,0	1/1:1,19:20:51.17:671,51,0	0/0:16,0:16:42.10:0,42,446	0/0:32,0:32:81.19:0,81,863	0/0:5,0:5:15.04:0,15,161	1/1:1,12:13:36.07:454,36,0	1/1:2,14:16:42.14:553,42,0	1/1:1,13:14:27.09:355,27,0	1/1:8,18:26:45.14:581,45,0	1/1:4,11:15:33.11:434,33,0	0/0:21,0:20:63.13:0,63,661	1/1:2,18:19:46.03:594,46,0
chr10	31697205	.	CTTT	C	8357.25	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=8.586;DP=491;FS=13.905;HRun=14;HaplotypeScore=107.3377;InbreedingCoeff=0.9874;MQ=74.37;MQ0=1;MQRankSum=-4.499;QD=26.87;ReadPosRankSum=9.023;VQSLOD=1.7457;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:2,17:19:49.38:562,49,0	1/1:2,9:11:27.05:315,27,0	0/0:21,0:17:26.79:0,27,337	0/0:9,0:6:9.37:0,9,98	1/1:1,15:18:47.78:520,48,0	1/1:3,17:21:45:508,45,0	1/1:3,13:17:40.99:439,41,0	0/0:20,0:36:70.38:0,70,959	1/1:4,9:13:23.99:280,24,0	1/1:6,6:13:20.93:228,21,0	1/1:4,14:19:35.16:392,35,0	1/1:1,10:11:27.07:315,27,0	1/1:1,24:25:66.12:771,66,0	1/1:2,10:13:32.99:368,33,0	0/0:9,0:9:27.09:0,27,494	1/1:1,15:18:51.02:561,51,0	1/1:1,10:12:29.43:323,29,0	1/1:3,8:11:24.03:280,24,0	0/0:10,0:21:42.11:0,42,646	0/0:20,0:29:72.13:0,72,950	0/0:6,0:23:42.13:0,42,622	1/1:2,16:18:45.07:525,45,0	1/1:2,12:16:35.01:369,35,0	1/1:2,5:8:18.86:195,19,0	1/1:4,14:18:44.24:496,44,0	1/1:3,17:20:47.93:560,48,0	0/0:9,0:32:75.24:0,75,1095	1/1:0,10:10:30.09:350,30,0
chr10	31698471	.	CAT	C	667.08	PASS	AB=0.783;AC=12;AF=0.286;AN=42;BaseQRankSum=2.544;DP=163;FS=2.150;HRun=0;HaplotypeScore=31.1971;InbreedingCoeff=0.2002;MQ=75.90;MQ0=0;MQRankSum=1.336;QD=9.01;ReadPosRankSum=-0.321;VQSLOD=2.8043;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:3,0:3:3.01:0,3,47	0/0:2,0:2:2.68:0,3,11	0/0:7,0:4:1.08:0,1,2	0/0:15,0:7:1.82:0,2,5	1/1:1,0:2:2.84:14,3,0	1/1:2,0:10:25.48:125,25,0	./.	0/1:14,12:27:4.02:355,0,4	./.	0/0:5,0:5:3.01:0,3,48	./.	0/0:5,0:5:3.01:0,3,48	0/0:3,0:3:6.02:0,6,95	0/0:1,0:1:3.01:0,3,47	./.	0/0:7,0:6:9.03:0,9,142	0/1:11,0:11:19.98:20,0,172	0/0:10,0:10:15.05:0,15,235	1/1:3,3:6:9.50:107,9,0	./.	./.	1/1:0,1:1:3.01:36,3,0	./.	0/0:1,0:1:3.01:0,3,48	0/0:6,0:5:6.02:0,6,95	0/0:6,0:6:5.98:0,6,67	0/1:6,3:10:32.69:106,0,33	0/1:4,1:5:32.86:33,0,128
chr10	31698511	.	T	TACACACAC	8329.95	PASS	AC=46;AF=0.885;AN=52;BaseQRankSum=-2.184;DP=244;FS=1.455;HRun=0;HaplotypeScore=76.4720;InbreedingCoeff=0.5880;MQ=64.37;MQ0=4;MQRankSum=-4.122;QD=40.83;ReadPosRankSum=-0.736;VQSLOD=4.3535;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,1:7:3.01:125,3,0	./.	0/0:17,0:13:9.50:0,9,190	0/0:12,0:10:0.69:0,1,52	1/1:2,0:10:14.84:122,15,0	1/1:5,0:16:29.94:245,30,0	1/1:1,0:8:20.97:172,21,0	1/1:20,0:26:30.20:515,30,0	1/1:3,0:7:17.99:187,18,0	1/1:7,0:7:14.91:233,15,0	1/1:4,9:12:30.40:1242,30,0	./.	1/1:3,2:5:15.05:547,15,0	1/1:4,2:6:18.06:744,18,0	0/0:0,0:6:14.51:0,15,78	1/1:6,2:9:12.04:430,12,0	1/1:9,4:13:21.07:835,21,0	1/1:3,0:6:6.02:116,6,0	1/1:8,0:13:15:143,15,0	1/1:1,0:5:8.99:74,9,0	1/1:0,0:2:5.99:49,6,0	1/1:3,0:3:3.01:123,3,0	1/1:1,2:3:6.02:248,6,0	1/1:2,1:3:3.01:124,3,0	1/1:2,7:9:18.06:747,18,0	1/1:4,3:9:21.07:692,21,0	1/1:2,0:13:26.96:221,27,0	1/1:3,3:6:12.01:396,12,0
chr10	31698990	.	G	GTGTATGTATGTATGTATGTA	14038.24	PASS	AB=0.844;AC=39;AF=0.696;AN=56;BaseQRankSum=5.409;DP=773;FS=8.369;HRun=0;HaplotypeScore=381.8709;InbreedingCoeff=0.6085;MQ=50.76;MQ0=1;MQRankSum=-4.696;QD=24.67;ReadPosRankSum=2.258;VQSLOD=2.0272;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:26:2.98:21,3,0	1/1:12,0:12:12.04:786,12,0	0/0:31,0:27:21.04:0,21,299	0/0:20,0:18:11.87:0,12,125	1/1:34,1:35:14.82:448,15,0	1/1:8,17:29:6.02:558,6,0	1/1:28,0:28:15.01:329,15,0	0/0:25,0:24:27.09:0,27,639	1/1:2,17:21:3.01:279,3,0	1/1:33,0:33:60.20:1908,60,0	1/1:26,0:26:12.01:392,12,0	1/1:25,0:25:12.01:168,12,0	1/1:24,0:25:21.07:1154,21,0	1/1:28,0:28:12.03:591,12,0	1/1:10,23:36:9.03:837,9,0	1/1:29,0:29:33.10:1807,33,0	0/1:30,0:29:26.08:48,0,26	0/1:12,0:12:27.63:251,0,28	0/0:25,0:25:42.02:0,42,1531	0/0:35,0:35:87.24:0,87,2933	0/0:35,0:35:81.22:0,81,3585	1/1:33,0:33:9.01:131,9,0	1/1:31,0:31:18.50:711,18,0	0/1:4,2:34:89.18:255,0,89	1/1:0,12:33:1.82:5,2,0	1/1:31,0:31:66.16:3032,66,0	0/0:33,0:33:69.21:0,69,2724	1/1:11,0:11:9.03:326,9,0
chr10	31699016	.	G	GTA	1654.36	PASS	AB=0.784;AC=15;AF=0.268;AN=56;BaseQRankSum=8.861;DP=700;FS=0.000;HRun=0;HaplotypeScore=219.5984;InbreedingCoeff=-0.3818;MQ=51.97;MQ0=2;MQRankSum=-5.933;QD=4.61;ReadPosRankSum=-4.321;VQSLOD=1.5161;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,4:31:35.44:0,35,521	0/1:8,5:13:56.81:57,0,109	0/0:31,0:24:69.21:0,69,1026	0/0:15,0:13:34.19:0,34,424	0/1:18,13:31:50.71:51,0,282	0/0:18,0:18:17.17:0,17,212	0/1:23,4:27:70.27:70,0,270	0/0:22,0:21:60.20:0,60,914	0/0:18,0:18:10.59:0,11,139	0/1:18,9:27:99:524,0,342	0/1:13,10:23:61.01:61,0,192	0/1:15,10:25:65.88:66,0,276	0/1:16,4:20:33.75:34,0,262	0/0:18,9:27:24.06:0,24,333	0/1:21,0:21:21.45:21,0,167	0/1:28,4:32:44.25:44,0,407	0/1:22,9:30:27.29:27,0,334	0/1:8,3:11:99:239,0,101	0/0:29,0:29:84.28:0,84,1264	0/0:34,0:34:90.01:0,90,1298	0/0:43,0:43:99:0,111,1630	0/1:21,10:31:36.16:36,0,222	0/1:18,10:28:99:116,0,201	0/0:22,1:24:2.45:0,2,212	0/0:21,0:21:17.55:0,18,235	0/1:20,9:29:99:427,0,446	0/0:27,0:27:75.23:0,75,1110	0/1:7,3:10:37.17:37,0,175
chr10	31699072	.	A	AGTGT	5658.94	PASS	AB=0.803;AC=28;AF=0.583;AN=48;BaseQRankSum=-6.332;DP=617;FS=0.694;HRun=0;HaplotypeScore=155.1768;InbreedingCoeff=0.3657;MQ=62.67;MQ0=11;MQRankSum=5.065;QD=14.47;ReadPosRankSum=-1.343;VQSLOD=4.2608;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:32,5:40:29.98:467,0,30	0/0:3,0:5:6.01:0,6,56	./.	./.	0/0:12,0:21:18.02:0,18,168	0/0:13,0:14:3:0,3,28	0/0:11,0:13:9.01:0,9,83	./.	0/0:10,0:12:3:0,3,28	0/1:19,0:19:42.36:202,0,42	0/1:9,3:12:31.90:157,0,32	0/1:10,8:19:32.49:201,0,32	1/1:13,1:13:13.05:175,13,0	1/1:17,2:21:26.47:329,26,0	1/1:21,0:24:23.52:284,24,0	1/1:19,4:26:29.29:464,29,0	1/1:18,4:23:26.19:372,26,0	0/1:7,5:12:37.97:133,0,38	./.	0/0:8,0:21:21.02:0,21,195	1/1:27,0:27:0.46:1,0,0	1/1:29,6:36:64.70:966,65,0	1/1:22,2:24:32.96:391,33,0	1/1:27,5:34:32.33:528,32,0	1/1:13,2:15:23.89:338,24,0	1/1:24,2:26:47.86:530,48,0	0/0:7,0:20:17.73:0,18,167	0/1:10,1:12:30.04:122,0,30
chr10	31701557	.	C	CT	6614.14	PASS	AB=1.000;AC=41;AF=0.732;AN=56;BaseQRankSum=-8.222;DP=391;FS=1.578;HRun=7;HaplotypeScore=36.4619;InbreedingCoeff=0.8712;MQ=67.12;MQ0=4;MQRankSum=0.360;QD=24.32;ReadPosRankSum=5.570;VQSLOD=4.1403;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,22:22:48.15:580,48,0	1/1:2,4:5:9.03:109,9,0	0/0:21,0:10:14.44:0,14,123	0/1:16,0:10:0.64:1,0,86	1/1:1,13:15:38.98:440,39,0	1/1:0,16:16:39.12:471,39,0	1/1:0,11:11:24.07:290,24,0	0/0:23,0:23:60.10:0,60,579	1/1:3,7:10:18.06:217,18,0	1/1:3,22:25:66.20:796,66,0	1/1:2,10:12:21.02:237,21,0	1/1:3,9:12:21.06:254,21,0	1/1:0,4:4:12.04:145,12,0	1/1:0,7:7:18.06:217,18,0	0/0:11,0:11:27.03:0,27,255	1/1:0,7:7:15.05:181,15,0	1/1:1,18:19:48.15:578,48,0	1/1:5,12:16:33.10:395,33,0	0/0:20,0:20:48.06:0,48,459	0/0:15,0:15:36.05:0,36,348	0/0:5,0:5:12.02:0,12,116	1/1:1,4:5:6.02:72,6,0	1/1:2,7:9:12.04:145,12,0	1/1:2,0:2:3.01:36,3,0	1/1:0,12:12:24.07:290,24,0	1/1:5,25:28:72.22:869,72,0	0/0:24,0:24:51.07:0,51,492	1/1:0,14:14:24.07:290,24,0
chr10	31702255	.	TTGCC	T	1761.06	PASS	AB=1.000;AC=11;AF=0.239;AN=46;BaseQRankSum=4.042;DP=345;FS=4.134;HRun=0;HaplotypeScore=46.4190;InbreedingCoeff=0.6599;MQ=51.47;MQ0=23;MQRankSum=4.701;QD=20.24;ReadPosRankSum=4.121;VQSLOD=2.9923;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:14:12.51:0,13,228	1/1:5,3:8:9.03:147,9,0	0/0:15,0:5:9.03:0,9,219	0/0:22,0:9:18.06:0,18,393	1/1:3,4:7:9.03:147,9,0	1/1:4,11:13:24.08:392,24,0	1/1:10,13:22:33.11:539,33,0	0/0:16,0:15:22.32:0,22,477	1/1:6,17:19:42.14:686,42,0	0/0:13,0:12:3.01:0,3,69	./.	0/0:16,0:11:6.02:0,6,121	0/1:11,0:10:0:0,0,0	0/0:13,0:9:6.01:0,6,95	0/0:14,0:9:3.01:0,3,38	0/0:7,0:5:5.93:0,6,40	0/0:19,0:14:15.03:0,15,234	0/0:9,0:5:3.01:0,3,70	0/0:20,0:20:30.10:0,30,724	0/0:5,0:5:9.03:0,9,210	0/0:17,0:17:12.04:0,12,288	./.	./.	0/0:8,0:2:3.01:0,3,56	./.	0/0:6,0:5:3.01:0,3,70	0/0:9,0:8:17.64:0,18,437	./.
chr10	31703409	.	T	TA	672.70	PASS	AB=0.756;AC=8;AF=0.143;AN=56;BaseQRankSum=-0.553;DP=465;FS=1.437;HRun=12;HaplotypeScore=54.1482;InbreedingCoeff=0.5790;MQ=65.77;MQ0=4;MQRankSum=-2.117;QD=8.41;ReadPosRankSum=-4.628;VQSLOD=1.1615;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:40.49:0,40,411	0/0:5,0:5:10.98:0,11,72	0/0:45,0:16:7.80:0,8,58	0/0:26,0:10:1.57:0,2,19	0/0:27,0:28:67.64:0,68,487	0/0:17,0:17:22.84:0,23,159	0/0:8,0:10:18.92:0,19,121	1/1:10,13:24:35.80:312,36,0	0/0:5,0:4:5.93:0,6,44	0/0:22,0:22:46.74:0,47,333	0/0:15,0:15:32.76:0,33,238	0/0:9,0:10:17.87:0,18,131	0/0:9,0:9:8.86:0,9,66	0/0:11,0:12:22.85:0,23,158	0/0:11,0:11:26.78:0,27,196	0/0:10,0:10:22.86:0,23,159	0/0:26,0:26:50.60:0,51,370	0/0:21,0:21:35.31:0,35,260	0/1:13,3:20:7.23:87,0,7	0/1:5,8:14:0.59:116,0,1	1/1:1,1:2:3:29,3,0	0/0:5,0:5:5.90:0,6,42	0/0:9,0:9:7.12:0,7,63	0/0:3,0:3:5.92:0,6,40	0/0:15,0:15:35.78:0,36,262	0/0:20,0:20:26.55:0,27,194	1/1:6,13:19:9.61:267,10,0	0/0:19,1:22:14.42:0,14,257
chr10	31703592	.	G	GAAA	6976.03	PASS	AB=0.611;AC=46;AF=0.821;AN=56;BaseQRankSum=-1.361;DP=521;FS=6.467;HRun=11;HaplotypeScore=87.2392;InbreedingCoeff=0.3537;MQ=59.52;MQ0=1;MQRankSum=-1.373;QD=14.32;ReadPosRankSum=2.018;VQSLOD=2.7437;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,19:31:51.15:899,51,0	0/0:4,0:6:1.46:0,1,32	0/0:14,0:5:3.47:0,3,42	0/0:14,0:12:23.02:0,23,221	1/1:10,0:32:4.68:114,5,0	1/1:3,0:15:17.95:58,18,0	0/1:7,0:19:22.67:23,0,41	1/1:16,0:22:27.92:186,28,0	1/1:1,0:12:8.72:19,9,0	1/1:9,12:25:36.76:488,37,0	1/1:7,3:10:14.08:192,14,0	1/1:6,11:18:30.08:517,30,0	1/1:7,10:17:11.97:225,12,0	1/1:9,16:26:23.74:395,24,0	1/1:6,0:21:32.87:252,33,0	1/1:8,7:15:18.06:339,18,0	1/1:5,17:27:36.06:574,36,0	1/1:8,10:22:33.09:547,33,0	0/1:14,0:27:51.21:51,0,67	0/1:9,0:23:5.37:16,0,5	1/1:1,0:7:6.73:31,7,0	1/1:9,3:12:19.30:258,19,0	1/1:8,3:13:18.02:254,18,0	1/1:8,15:27:36.12:663,36,0	1/1:12,3:15:15.05:282,15,0	1/1:6,13:20:36.09:507,36,0	0/1:2,0:16:11.24:11,0,19	1/1:6,2:8:5.97:76,6,0
chr10	31703959	.	GA	G	2579.04	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=10.325;DP=691;FS=6.683;HRun=7;HaplotypeScore=65.0671;InbreedingCoeff=0.9979;MQ=81.38;MQ0=0;MQRankSum=-0.828;QD=27.15;ReadPosRankSum=2.190;VQSLOD=4.5285;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:93.27:0,93,1136	1/1:0,6:6:18.04:184,18,0	0/0:29,0:29:37.14:0,37,614	0/0:16,0:15:30.52:0,31,422	1/1:0,23:23:69.16:704,69,0	1/1:1,21:22:60.13:612,60,0	1/1:1,18:19:54.12:551,54,0	0/0:39,0:39:99:0,108,1336	1/1:1,24:25:69.16:704,69,0	0/0:22,0:22:60.19:0,60,753	0/0:29,0:29:78.23:0,78,964	0/0:33,0:33:84.20:0,84,1002	0/0:26,0:26:75.24:0,75,942	0/0:25,0:25:69.21:0,69,855	0/0:19,0:19:54.17:0,54,679	0/0:25,0:25:66.20:0,66,819	0/0:31,0:31:87.28:0,87,1094	0/0:16,0:16:36.12:0,36,453	0/0:21,0:21:63.20:0,63,792	0/0:31,0:31:81.26:0,81,1019	0/0:22,0:22:60.15:0,60,713	0/0:25,0:25:69.22:0,69,868	0/0:28,0:28:69.21:0,69,855	0/0:14,0:14:36.12:0,36,453	0/0:30,0:30:78.25:0,78,981	0/0:41,0:41:99:0,111,1378	0/0:27,0:27:72.23:0,72,901	0/0:11,0:11:33.11:0,33,415
chr10	31704700	.	T	TAA	9882.84	PASS	AB=0.983;AC=54;AF=0.964;AN=56;BaseQRankSum=-2.473;DP=558;FS=7.928;HRun=9;HaplotypeScore=86.7226;InbreedingCoeff=-0.0366;MQ=78.74;MQ0=1;MQRankSum=-3.072;QD=17.71;ReadPosRankSum=4.307;VQSLOD=2.9441;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,27:32:66.22:1016,66,0	1/1:3,0:15:29.94:103,30,0	0/1:15,0:14:17.57:18,0,162	0/1:24,0:21:28.92:29,0,112	1/1:7,0:31:3.62:165,4,0	1/1:2,0:20:36.18:123,36,0	1/1:2,0:15:32.44:111,32,0	1/1:6,0:29:25.91:188,26,0	1/1:0,0:14:24.95:86,25,0	1/1:4,20:25:62.68:886,63,0	1/1:1,13:15:38.62:562,39,0	1/1:5,11:16:45.14:669,45,0	1/1:2,12:16:29.31:406,29,0	1/1:2,11:15:24.07:349,24,0	1/1:2,0:23:4.79:108,5,0	1/1:2,11:13:24.08:370,24,0	1/1:4,23:29:62.18:895,62,0	1/1:2,7:9:11.90:185,12,0	1/1:6,0:20:31.91:121,32,0	1/1:4,0:30:50.99:201,51,0	1/1:3,0:17:27.17:93,27,0	1/1:1,9:10:24.07:349,24,0	1/1:8,10:18:33.85:430,34,0	1/1:5,13:19:36.12:554,36,0	1/1:3,23:26:45.15:693,45,0	1/1:3,18:22:56.94:783,57,0	1/1:2,0:21:13.50:114,13,0	1/1:1,12:15:18.06:277,18,0
chr10	31706231	.	GTCTGTCTGTCTC	G	3481.31	PASS	AB=0.915;AC=24;AF=0.429;AN=56;BaseQRankSum=0.192;DP=573;FS=1.703;HRun=0;HaplotypeScore=254.1511;InbreedingCoeff=0.4271;MQ=45.94;MQ0=17;MQRankSum=-3.257;QD=12.30;ReadPosRankSum=-3.687;VQSLOD=2.0170;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:29,2:29:1.20:215,0,1	0/0:6,0:6:9.03:0,9,319	0/0:25,0:7:20.91:0,21,451	0/0:37,0:17:29.52:0,30,896	0/0:24,0:24:33.08:0,33,612	0/0:17,0:17:29.64:0,30,598	0/0:19,0:17:27.06:0,27,552	0/0:26,0:25:9.71:0,10,726	0/0:22,0:21:30.49:0,30,788	0/1:14,1:15:25.34:370,0,25	1/1:14,0:14:9.83:211,10,0	1/1:24,3:29:7.86:437,8,0	0/1:13,3:14:43.88:542,0,44	1/1:13,3:16:6:93,6,0	0/0:26,0:26:3.94:0,4,253	1/1:16,1:16:18.04:356,18,0	1/1:17,0:16:14.89:336,15,0	1/1:19,0:20:5.88:261,6,0	0/1:23,0:19:13.67:14,0,578	0/0:25,0:25:17.57:0,18,318	0/0:26,0:26:2.97:0,3,48	1/1:20,1:21:9:124,9,0	0/1:9,2:10:18.66:19,0,27	1/1:18,0:18:0.55:2,1,0	1/1:19,4:22:18.80:302,19,0	0/1:11,1:12:99:202,0,159	0/0:27,0:27:34.83:0,35,464	0/0:8,1:8:2.50:0,2,9
chr10	31706233	.	CTG	C	1331.26	PASS	AB=0.943;AC=22;AF=0.393;AN=56;BaseQRankSum=0.972;DP=586;FS=21.495;HRun=0;HaplotypeScore=218.4494;InbreedingCoeff=0.3475;MQ=44.65;MQ0=18;MQRankSum=-0.298;QD=4.79;ReadPosRankSum=-0.366;VQSLOD=1.5713;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:27,3:29:11.16:122,11,0	0/0:6,0:6:8.92:0,9,115	0/0:23,0:8:23.94:0,24,275	0/0:38,0:19:38.71:0,39,535	0/0:26,0:25:31.67:0,32,336	0/0:18,0:18:30.45:0,30,348	0/0:20,0:18:29.88:0,30,325	0/0:27,0:26:71.93:0,72,823	0/0:22,0:21:41.78:0,42,441	0/1:17,1:18:99:162,0,110	1/1:12,2:14:9.22:71,9,0	0/1:22,5:28:76.43:146,0,76	1/1:13,2:13:4.34:213,4,0	1/1:11,5:16:5.92:69,6,0	0/0:26,0:26:10.64:0,11,175	0/1:17,1:17:2.95:182,0,3	0/1:19,0:17:46.09:46,0,52	0/1:19,0:20:77.56:78,0,135	0/0:23,0:19:56.86:0,57,610	0/0:26,0:26:20.95:0,21,293	0/0:25,0:25:2.97:0,3,42	1/1:17,4:21:9.46:75,9,0	0/1:12,0:11:19.01:19,0,41	0/1:5,0:22:0:0,0,0	1/1:25,0:23:19:192,19,0	0/1:9,3:12:94.81:131,0,95	0/0:28,0:28:44.86:0,45,429	1/1:2,0:7:1.55:4,2,0
chr10	31706239	.	GTCTCTCTC	G	2279.44	PASS	AB=0.970;AC=30;AF=0.536;AN=56;BaseQRankSum=5.393;DP=529;FS=0.000;HRun=0;HaplotypeScore=231.4518;InbreedingCoeff=0.0560;MQ=39.72;MQ0=15;MQRankSum=-4.985;QD=5.67;ReadPosRankSum=0.025;VQSLOD=1.7855;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:26:7.96:55,0,8	0/0:5,0:6:6.49:0,6,157	0/0:23,0:8:20.43:0,20,455	0/0:34,0:17:39.51:0,40,1001	0/1:23,1:24:29.44:29,0,82	0/0:16,0:16:19:0,19,159	0/1:17,0:15:15.49:15,0,128	0/0:23,0:23:38.09:0,38,281	0/1:18,1:19:64.16:64,0,152	1/1:14,1:15:5.02:372,5,0	1/1:12,0:13:5.37:80,5,0	0/1:19,4:25:3.05:261,0,3	0/1:15,0:13:20.79:350,0,21	1/1:15,0:15:1.80:5,2,0	0/1:25,0:25:10.57:11,0,152	1/1:17,0:16:18.06:324,18,0	1/1:18,0:16:15.31:224,15,0	0/1:16,0:16:14.26:140,0,14	0/0:19,0:17:21.48:0,21,162	0/1:27,0:27:14.42:14,0,79	0/1:24,0:24:0:0,0,0	1/1:18,1:19:3:30,3,0	1/1:10,0:10:0.47:2,0,0	1/1:14,0:14:0.47:2,0,0	1/1:22,0:20:8.39:130,8,0	0/1:11,0:11:94.63:243,0,95	0/1:25,0:25:83.35:88,0,83	0/0:6,0:6:0.47:0,0,1
chr10	31706241	.	C	CTG	558.45	PASS	AB=0.995;AC=25;AF=0.446;AN=56;BaseQRankSum=5.675;DP=524;FS=6.799;HRun=0;HaplotypeScore=213.4031;InbreedingCoeff=0.4408;MQ=40.33;MQ0=15;MQRankSum=-1.704;QD=2.06;ReadPosRankSum=-0.484;VQSLOD=1.9561;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:24:11.71:66,12,0	0/0:7,0:7:8.93:0,9,85	0/0:20,0:7:15:0,15,223	0/0:35,0:17:36.12:0,36,532	0/0:24,0:23:26.79:0,27,238	0/0:16,0:16:16.50:0,16,146	0/0:17,0:15:21.74:0,22,168	0/0:28,0:28:3.05:0,3,246	0/0:19,0:18:16.07:0,16,256	0/1:13,0:13:1.88:102,0,2	1/1:13,0:13:1.65:23,2,0	0/1:24,0:25:13.49:47,0,13	1/1:15,0:13:13.06:84,13,0	0/1:13,0:13:0.12:0,0,0	1/1:17,9:26:9.48:133,9,0	1/1:16,0:15:4.92:43,5,0	0/1:16,0:14:33.66:49,0,34	0/1:15,0:15:7.82:72,0,8	0/0:17,0:15:5.02:0,5,166	0/0:28,0:28:8.32:0,8,55	0/1:25,0:25:0:0,0,0	1/1:19,0:19:2.29:5,2,0	0/1:11,0:10:0:0,0,0	0/0:15,0:15:0.72:0,1,2	1/1:21,0:19:5.70:48,6,0	1/1:11,0:11:2.64:20,3,0	0/0:27,0:27:29.60:0,30,176	1/1:6,0:6:3:29,3,0
chr10	31706243	.	CTCTCTG	C	4616.97	PASS	AB=0.955;AC=37;AF=0.661;AN=56;BaseQRankSum=-1.801;DP=523;FS=2.244;HRun=0;HaplotypeScore=212.8438;InbreedingCoeff=0.1566;MQ=39.01;MQ0=14;MQRankSum=2.718;QD=10.59;ReadPosRankSum=-1.847;VQSLOD=3.8765;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:25:5.35:22,0,5	0/1:7,0:7:39.64:40,0,76	0/0:18,0:6:15.05:0,15,300	0/0:37,0:18:41.98:0,42,768	1/1:24,0:23:27.60:356,28,0	1/1:14,0:14:15.33:212,15,0	1/1:16,0:14:3.95:193,4,0	1/1:0,27:27:77.88:959,78,0	0/1:20,0:19:35.20:384,0,35	0/1:13,0:13:45.68:78,0,46	1/1:13,0:13:3.81:45,4,0	0/1:26,0:26:59.77:96,0,60	0/1:13,0:11:44.19:137,0,44	0/1:13,0:13:0:0,0,0	0/0:26,0:26:6.06:0,6,128	1/1:16,0:15:14.88:129,15,0	1/1:16,0:14:7.27:64,7,0	0/1:15,0:15:36.29:64,0,36	1/1:3,13:14:36.02:646,36,0	1/1:2,26:29:11.97:204,12,0	0/1:0,25:26:0:0,0,0	0/1:18,0:18:0:1,0,0	1/1:11,0:10:0.47:1,0,0	1/1:16,0:16:0.52:2,1,0	1/1:21,0:19:7.03:68,7,0	0/1:12,0:12:76.88:77,0,85	1/1:1,24:27:36.12:839,36,0	0/0:6,0:6:3.01:0,3,33
chr10	31707579	.	A	AGC	1747.31	PASS	AB=0.995;AC=30;AF=0.536;AN=56;BaseQRankSum=4.439;DP=509;FS=4.266;HRun=0;HaplotypeScore=173.8575;InbreedingCoeff=0.3264;MQ=44.41;MQ0=14;MQRankSum=-4.086;QD=5.33;ReadPosRankSum=1.251;VQSLOD=3.2466;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,1:24:6.94:0,7,37	0/1:8,0:8:6.13:6,0,64	0/0:20,0:6:10.71:0,11,111	0/0:29,0:11:16.34:0,16,230	0/0:26,0:25:0.41:0,0,151	0/0:12,0:10:2.99:0,3,23	0/1:19,0:18:1.25:1,0,119	0/1:30,0:26:34.43:34,0,382	0/0:11,0:11:8.93:0,9,64	1/1:22,1:22:16.20:245,16,0	1/1:12,1:13:2.74:12,3,0	1/1:11,2:12:17.74:157,18,0	1/1:17,1:18:27.21:208,27,0	1/1:16,3:19:14.29:128,14,0	1/1:18,0:16:14.81:102,15,0	1/1:15,1:16:17.80:148,18,0	0/1:15,0:13:33.54:52,0,34	0/1:11,0:11:10.03:93,0,10	0/1:15,0:14:9.24:9,0,201	0/0:20,0:19:25.23:0,25,216	0/0:14,0:12:11.96:0,12,95	1/1:16,0:16:14.94:116,15,0	1/1:20,3:23:6.23:189,6,0	1/1:19,1:18:4.55:94,5,0	0/1:24,1:24:23.77:99,0,24	0/1:16,0:12:42.79:100,0,43	0/0:19,0:19:25.78:0,26,257	1/1:8,2:9:15.69:139,16,0
chr10	31707587	.	A	AGCGAGAGC	4203.11	PASS	AB=0.991;AC=41;AF=0.732;AN=56;BaseQRankSum=2.437;DP=490;FS=42.520;HRun=0;HaplotypeScore=196.3393;InbreedingCoeff=-0.2160;MQ=39.70;MQ0=16;MQRankSum=-0.471;QD=9.12;ReadPosRankSum=4.506;VQSLOD=1.5067;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:30,1:24:8.78:199,9,0	1/1:7,0:6:0.70:18,1,0	0/1:21,0:6:11.27:11,0,17	0/0:29,0:7:11.13:0,11,153	1/1:29,0:28:20.27:277,20,0	1/1:11,0:9:3:25,3,0	0/1:17,0:16:10.46:103,0,10	1/1:23,0:19:7.52:316,8,0	1/1:9,0:9:9.02:117,9,0	0/1:24,0:23:99:169,0,135	1/1:14,1:15:11.03:81,11,0	1/1:7,1:7:6.91:179,7,0	1/1:18,0:18:13.71:119,14,0	1/1:15,2:17:9.03:298,9,0	0/1:19,0:17:32.22:98,0,32	1/1:15,1:16:14.17:171,14,0	0/1:15,0:13:60.27:193,0,60	0/1:11,0:11:22.90:244,0,23	0/1:14,0:12:33.89:248,0,34	0/1:18,0:17:1.63:193,0,2	1/1:13,0:11:10.28:131,10,0	0/1:15,0:15:4.83:20,0,5	0/1:22,2:24:21.78:220,0,22	1/1:20,0:18:8.54:75,9,0	0/1:21,1:21:3.95:249,0,4	0/1:13,0:9:36.92:37,0,83	0/1:21,0:21:60.81:173,0,61	1/1:9,1:9:12.02:239,12,0
chr10	31709260	.	C	CTT	3143.50	PASS	AB=0.583;AC=51;AF=0.911;AN=56;BaseQRankSum=-1.182;DP=496;FS=13.988;HRun=9;HaplotypeScore=103.2936;InbreedingCoeff=0.7436;MQ=70.58;MQ0=0;MQRankSum=-3.523;QD=6.86;ReadPosRankSum=2.725;VQSLOD=0.0510;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,0:30:59.76:205,60,0	1/1:1,0:7:12.48:43,12,0	0/0:16,0:12:27.25:0,27,258	0/0:22,0:19:25.14:0,25,270	1/1:3,0:17:27.45:94,27,0	1/1:3,0:19:37.15:127,37,0	1/1:3,0:14:24.16:105,24,0	1/1:13,1:38:40.91:300,41,0	1/1:0,0:17:29.82:103,30,0	1/1:4,0:18:13.05:116,13,0	1/1:1,0:13:27.45:94,27,0	1/1:6,0:16:12.48:43,12,0	1/1:2,0:18:30.19:107,30,0	1/1:5,0:21:30.42:104,30,0	1/1:1,11:14:24.07:335,24,0	1/1:2,0:15:27.45:94,27,0	1/1:4,0:25:33.92:149,34,0	1/1:2,0:22:16.24:126,16,0	1/1:5,0:18:32.81:126,33,0	1/1:3,0:14:27.45:94,27,0	1/1:1,0:16:29.94:103,30,0	1/1:3,0:11:19.84:68,20,0	1/1:1,1:15:35.45:157,35,0	1/1:1,0:21:42.42:146,42,0	1/1:1,1:19:42.66:181,43,0	1/1:2,0:19:42.42:145,42,0	1/1:1,0:13:27.45:94,27,0	0/1:2,0:7:24.27:24,0,45
chr10	31710369	.	G	GTC	7577.57	PASS	AB=0.556;AC=47;AF=0.839;AN=56;BaseQRankSum=1.680;DP=596;FS=6.758;HRun=0;HaplotypeScore=105.4524;InbreedingCoeff=0.4668;MQ=57.63;MQ0=11;MQRankSum=3.579;QD=14.27;ReadPosRankSum=1.717;VQSLOD=4.5269;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,32:37:12:207,12,0	1/1:10,0:10:18.06:298,18,0	0/0:15,0:8:18.05:0,18,225	0/0:19,0:14:24.08:0,24,319	1/1:4,15:19:27.09:466,27,0	1/1:4,16:23:9.03:150,9,0	1/1:3,19:21:3:27,3,0	1/1:40,0:40:85.41:919,85,0	1/1:6,24:30:17.80:257,18,0	1/1:5,22:27:63.18:1050,63,0	1/1:4,13:17:36.12:603,36,0	1/1:28,1:29:9.03:137,9,0	1/1:15,1:16:16.82:185,17,0	0/1:6,18:24:16.94:144,0,17	1/1:22,0:22:44.44:532,44,0	1/1:12,1:13:6.02:91,6,0	1/1:10,13:24:2.97:52,3,0	1/1:3,8:10:1.95:146,2,0	1/1:16,0:15:34.88:351,35,0	1/1:7,14:22:8.93:75,9,0	0/1:3,18:20:0:0,0,0	1/1:4,19:23:17.77:270,18,0	1/1:1,14:16:9.03:148,9,0	0/0:10,21:31:5.28:0,5,41	0/1:4,14:17:21.07:25,0,21	1/1:5,17:20:49.95:758,50,0	1/1:12,7:18:44.34:631,44,0	1/1:3,5:6:4.26:54,4,0
chr10	31710375	.	CTG	C	3516.73	PASS	AB=0.913;AC=45;AF=0.804;AN=56;BaseQRankSum=1.346;DP=588;FS=7.386;HRun=0;HaplotypeScore=118.1910;InbreedingCoeff=0.3074;MQ=55.27;MQ0=12;MQRankSum=3.047;QD=6.25;ReadPosRankSum=-1.411;VQSLOD=2.5054;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:40,2:40:0.04:91,0,0	1/1:1,7:8:8.29:60,8,0	0/0:10,0:6:17.65:0,18,296	0/0:15,0:10:24.08:0,24,455	1/1:18,0:18:21.60:120,22,0	1/1:23,1:23:8.84:75,9,0	0/1:23,0:22:0.16:0,0,2	1/1:0,34:34:88.39:965,88,0	1/1:28,1:29:14.66:109,15,0	1/1:25,0:26:8.16:68,8,0	1/1:16,0:17:30.46:172,30,0	1/1:4,0:30:8.59:53,9,0	1/1:4,1:16:12.05:102,12,0	0/1:21,0:23:7.72:8,0,18	1/1:19,3:22:40.47:501,40,0	1/1:1,0:16:5.99:50,6,0	1/1:22,0:21:2.97:18,3,0	1/1:12,0:11:5.90:39,6,0	0/1:6,13:18:0.72:349,0,1	1/1:19,2:21:11.82:91,12,0	1/1:19,1:18:0.46:1,0,0	1/1:22,0:23:17.81:97,18,0	1/1:13,0:13:5.87:63,6,0	0/1:34,0:34:9.86:30,0,10	1/1:19,0:18:11.19:70,11,0	1/1:22,0:20:14.27:174,14,0	0/1:20,1:20:59.19:207,0,59	0/1:8,0:6:4.09:6,0,4
chr10	31710385	.	C	CTG	718.74	PASS	AB=0.969;AC=19;AF=0.339;AN=56;BaseQRankSum=2.261;DP=569;FS=5.275;HRun=0;HaplotypeScore=128.7287;InbreedingCoeff=-0.2946;MQ=52.55;MQ0=16;MQRankSum=-2.768;QD=1.92;ReadPosRankSum=-1.589;VQSLOD=1.4520;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:40:18.51:0,19,157	0/0:8,0:8:8.40:0,8,66	0/0:6,0:5:11.88:0,12,88	0/0:11,0:6:12.02:0,12,127	0/0:18,0:18:11.50:0,12,72	0/0:22,1:22:7.86:0,8,44	0/0:22,0:20:8.95:0,9,74	1/1:34,0:34:5.07:210,5,0	0/0:29,0:29:5.92:0,6,74	0/0:25,0:24:19.79:0,20,397	0/1:15,1:16:24.59:25,0,50	0/1:29,1:30:3.88:45,0,4	0/1:17,0:17:35.50:61,0,35	0/1:25,1:25:7.34:7,0,83	0/1:25,0:25:99:111,0,116	0/1:15,0:15:1.36:1,0,19	0/1:18,2:19:29.99:57,0,30	0/1:14,1:13:25.72:26,0,87	0/1:20,0:19:70.39:84,0,70	0/1:20,0:20:6.57:7,0,42	0/1:16,0:14:0:0,0,0	0/1:21,0:20:6.42:6,0,65	0/0:10,0:10:2.10:0,2,23	0/1:30,3:33:37.59:38,0,83	0/1:16,1:16:22.67:74,0,23	0/1:23,0:21:51.68:52,0,257	0/1:19,0:18:17.63:18,0,96	0/1:7,1:4:10.80:47,0,11
chr10	31711293	.	C	CA	28046.80	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-7.572;DP=649;FS=5.111;HRun=0;HaplotypeScore=53.8898;InbreedingCoeff=0.9444;MQ=78.48;MQ0=0;MQRankSum=-8.636;QD=45.09;ReadPosRankSum=4.245;VQSLOD=4.8918;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,14:14:36.12:575,36,0	1/1:0,15:15:39.13:624,39,0	0/0:15,0:15:44.95:0,45,565	0/0:12,0:12:30.99:0,31,417	1/1:0,27:27:78.27:1247,78,0	1/1:0,29:29:81.28:1295,81,0	1/1:0,31:31:81.28:1295,81,0	1/1:0,15:16:48.16:760,48,0	1/1:1,28:29:81.28:1295,81,0	1/1:0,46:46:99:2137,138,0	1/1:0,23:23:63.21:1007,63,0	1/1:0,27:27:75.26:1198,75,0	1/1:0,38:38:99:1727,108,0	1/1:0,14:14:42.14:670,42,0	1/1:0,30:30:84.29:1343,84,0	1/1:1,30:31:90.31:1439,90,0	1/1:0,20:20:60.20:959,60,0	1/1:0,8:8:18.06:288,18,0	1/1:0,19:19:57.19:908,57,0	1/1:2,43:45:99:2013,126,0	1/1:1,13:14:39.13:624,39,0	1/1:0,25:25:69.24:1102,69,0	1/1:0,25:25:72.25:1151,72,0	1/1:1,22:23:60.20:959,60,0	1/1:0,18:18:54.18:863,54,0	1/1:0,24:24:72.23:1129,72,0	1/1:0,29:29:84.29:1343,84,0	1/1:0,2:2:6.02:96,6,0
chr10	31711824	.	AAAC	A	2908.25	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=11.032;DP=719;FS=12.183;HRun=0;HaplotypeScore=100.9988;InbreedingCoeff=0.9847;MQ=69.56;MQ0=0;MQRankSum=-0.734;QD=26.93;ReadPosRankSum=3.546;VQSLOD=3.3573;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,117,2290	1/1:2,5:7:8.91:136,9,0	0/0:25,0:24:56.36:0,56,1122	0/0:31,0:31:73.03:0,73,1357	1/1:2,20:22:42.08:565,42,0	1/1:4,28:32:66.22:986,66,0	1/1:2,20:22:45.15:669,45,0	0/0:33,0:33:78.27:0,78,1573	1/1:4,21:25:48.16:724,48,0	0/0:29,0:29:78.26:0,78,1538	0/0:10,0:10:27.09:0,27,569	0/0:34,0:34:96.31:0,96,1865	0/0:29,0:29:84.27:0,84,1648	0/0:24,0:24:54.19:0,54,1114	0/0:29,0:29:84.28:0,84,1660	0/0:30,1:31:39.09:0,39,1621	0/0:35,0:35:88.54:0,89,1781	0/0:11,0:11:30.10:0,30,620	0/0:25,0:25:54.18:0,54,1073	0/0:29,0:29:72.23:0,72,1429	0/0:38,0:38:99:0,102,2100	0/0:22,0:22:60.21:0,60,1224	0/0:22,0:22:63.20:0,63,1253	0/0:20,0:20:54.19:0,54,1111	0/0:27,0:27:72.25:0,72,1493	0/0:30,0:30:90.28:0,90,1752	0/0:26,0:26:69.24:0,69,1388	0/0:8,0:8:21.04:0,21,371
chr10	31712971	.	GT	G	6835.82	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-16.382;DP=597;FS=1.807;HRun=9;HaplotypeScore=82.7017;InbreedingCoeff=0.9781;MQ=82.91;MQ0=0;MQRankSum=-1.691;QD=22.94;ReadPosRankSum=3.762;VQSLOD=5.5813;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,21:23:54.02:494,54,0	0/0:10,0:10:23.22:0,23,134	0/0:14,0:14:25.16:0,25,295	0/0:25,0:24:3.90:0,4,394	0/0:38,0:38:99:0,101,571	0/0:34,0:34:73.51:0,74,542	0/0:21,0:21:58.14:0,58,340	0/0:27,0:27:59.25:0,59,313	0/0:21,0:21:60.90:0,61,360	1/1:2,23:25:69.02:628,69,0	1/1:4,15:19:42.01:384,42,0	1/1:3,19:22:54.03:494,54,0	1/1:3,23:26:60.02:549,60,0	1/1:2,16:18:48.02:439,48,0	0/0:16,0:16:40.32:0,40,222	1/1:1,20:21:39.51:477,40,0	1/1:2,15:17:39.02:357,39,0	1/1:2,12:14:27.01:247,27,0	0/0:24,1:26:33.04:0,33,277	0/0:30,0:30:59.45:0,59,420	0/0:10,0:10:26.09:0,26,148	1/1:1,18:19:54.03:494,54,0	1/1:1,19:20:54.02:494,54,0	1/1:1,22:23:63.03:577,63,0	1/1:2,13:15:35.89:329,36,0	1/1:4,23:27:69.01:626,69,0	0/0:27,0:27:53.32:0,53,393	1/1:0,9:9:27.01:247,27,0
chr10	31714366	.	TC	T	10170.29	PASS	AB=0.995;AC=37;AF=0.661;AN=56;BaseQRankSum=-13.651;DP=625;FS=1.760;HRun=6;HaplotypeScore=86.1281;InbreedingCoeff=0.5371;MQ=79.16;MQ0=0;MQRankSum=-2.882;QD=20.06;ReadPosRankSum=1.331;VQSLOD=4.2744;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,22:25:69.10:717,69,0	0/1:5,0:5:10.02:10,0,40	0/0:20,0:20:57.15:0,57,676	0/0:20,0:20:50.88:0,51,559	0/0:24,0:24:16.50:0,16,266	0/1:31,0:31:14.68:15,0,260	0/0:16,0:16:17.16:0,17,151	0/1:27,0:27:13.21:13,0,175	0/1:18,0:18:2:2,0,156	1/1:6,34:39:99:1125,108,0	1/1:1,21:22:63.09:654,63,0	1/1:3,24:27:75.17:791,75,0	1/1:2,24:26:66.17:708,66,0	1/1:7,17:24:63.14:662,63,0	0/1:29,0:29:21.66:22,0,237	1/1:1,19:20:43.45:566,43,0	1/1:4,12:16:44.90:445,45,0	1/1:4,9:13:30.06:313,30,0	0/1:11,0:11:7.46:7,0,60	0/0:29,0:29:66.90:0,67,398	0/0:9,0:9:21.94:0,22,103	1/1:3,31:34:93.02:968,93,0	1/1:5,19:24:63.06:647,63,0	1/1:2,8:10:21.05:225,21,0	1/1:2,22:24:72.13:753,72,0	1/1:4,29:33:93.13:944,93,0	0/1:27,1:28:2.09:2,0,227	1/1:2,18:20:54.13:580,54,0
chr10	31714448	.	G	GA	16750.67	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-5.225;DP=605;FS=3.696;HRun=8;HaplotypeScore=61.1416;InbreedingCoeff=0.9266;MQ=70.87;MQ0=0;MQRankSum=-5.164;QD=28.58;ReadPosRankSum=2.831;VQSLOD=5.3780;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,18:22:60.15:672,60,0	1/1:0,12:12:33.10:381,33,0	0/0:9,0:9:18.01:0,18,164	0/0:10,0:10:17.96:0,18,155	1/1:1,28:29:75.22:866,75,0	1/1:5,28:33:75.22:866,75,0	1/1:1,16:17:42.12:485,42,0	1/1:5,30:36:93.08:1031,93,0	1/1:2,20:22:60.18:692,60,0	1/1:10,26:36:81.23:928,81,0	1/1:3,17:20:48.14:554,48,0	1/1:7,14:21:51.14:580,51,0	1/1:3,20:23:66.19:753,66,0	1/1:1,23:24:63.19:727,63,0	1/1:3,26:29:75.22:866,75,0	1/1:5,12:17:14.65:415,15,0	1/1:4,21:25:57.17:658,57,0	1/1:1,17:18:51.15:588,51,0	1/1:3,15:18:48.09:515,48,0	1/1:4,19:23:57.12:642,57,0	1/1:0,8:8:24.07:277,24,0	1/1:5,16:22:26.53:540,27,0	1/1:4,18:23:57:638,57,0	1/1:0,6:6:18.05:208,18,0	1/1:4,31:36:99:1121,99,0	1/1:8,20:28:69.21:796,69,0	1/1:4,28:32:64.56:883,65,0	1/1:3,2:5:6.02:69,6,0
chr10	31715275	.	CT	C	3387.91	PASS	AB=0.752;AC=10;AF=0.185;AN=54;BaseQRankSum=16.769;DP=860;FS=130.661;HRun=2;HaplotypeScore=104.6245;InbreedingCoeff=-0.2389;MQ=57.74;MQ0=28;MQRankSum=-0.870;QD=7.40;ReadPosRankSum=4.086;VQSLOD=0.2945;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:54,32:83:99:670,0,2079	0/0:10,0:8:24.08:0,24,359	0/0:16,0:2:5.38:0,5,50	0/0:13,0:5:8.52:0,9,97	0/0:40,1:39:75.37:0,75,1561	0/0:30,0:29:72.20:0,72,1044	0/0:35,0:30:48.13:0,48,664	0/0:13,0:13:33.11:0,33,495	0/0:36,0:34:84.24:0,84,1198	0/1:24,10:34:99:290,0,935	0/0:24,0:23:66.22:0,66,988	0/1:28,15:41:99:299,0,809	0/1:27,10:36:99:143,0,969	0/1:26,12:37:99:332,0,799	./.	0/1:34,16:48:99:308,0,1183	0/1:34,17:50:99:410,0,1193	0/1:18,13:30:99:281,0,558	0/0:18,0:15:42.13:0,42,594	0/0:17,0:14:39.13:0,39,583	0/0:47,0:46:99:0,105,1528	0/0:18,1:18:12.30:0,12,657	0/0:21,0:21:63.19:0,63,904	0/1:39,21:56:99:496,0,1503	0/0:24,0:24:72.22:0,72,1024	0/1:20,8:25:99:158,0,763	0/0:30,0:30:81.22:0,81,1169	0/0:8,0:8:24.06:0,24,330
chr10	31715562	.	G	GAAA	2107.02	PASS	AB=1.000;AC=21;AF=0.389;AN=54;BaseQRankSum=6.043;DP=520;FS=4.844;HRun=12;HaplotypeScore=101.8133;InbreedingCoeff=0.8696;MQ=66.02;MQ0=6;MQRankSum=-5.765;QD=14.24;ReadPosRankSum=-3.705;VQSLOD=1.3867;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:41:31.08:0,31,639	1/1:2,0:2:3.01:39,3,0	0/0:24,0:20:29.28:0,29,289	0/1:14,0:9:1.37:1,0,99	1/1:10,12:24:33.03:453,33,0	1/1:1,7:14:24.04:363,24,0	1/1:6,7:14:12.02:176,12,0	1/1:14,4:19:23.95:271,24,0	1/1:2,6:10:18:234,18,0	0/0:24,0:24:38.91:0,39,428	0/0:26,0:26:54.68:0,55,610	0/0:18,0:18:20.80:0,21,206	0/0:20,0:21:27.03:0,27,482	0/0:12,0:13:25.39:0,25,282	./.	0/0:20,0:21:46.04:0,46,476	0/0:23,0:26:11.29:0,11,458	0/0:24,0:26:56.84:0,57,592	1/1:6,3:10:18.03:222,18,0	1/1:14,0:14:30.05:406,30,0	1/1:4,0:4:0.89:2,1,0	0/0:15,0:15:33.06:0,33,368	0/0:21,0:23:43.55:0,44,501	0/0:23,0:24:53.89:0,54,571	0/0:18,0:19:18.66:0,19,361	0/0:26,0:33:35.17:0,35,580	1/1:15,0:13:17.86:138,18,0	0/0:8,0:10:7.22:0,7,97
chr10	31715662	.	G	GAAC	11168.42	PASS	AB=0.650;AC=48;AF=0.889;AN=54;BaseQRankSum=-3.344;DP=441;FS=7.777;HRun=0;HaplotypeScore=108.4913;InbreedingCoeff=0.5000;MQ=60.62;MQ0=3;MQRankSum=-2.461;QD=27.64;ReadPosRankSum=3.921;VQSLOD=4.5556;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,15:19:33.11:643,33,0	1/1:6,1:5:5.81:51,6,0	0/0:20,0:17:34.85:0,35,424	0/0:17,0:16:17.99:0,18,209	1/1:12,0:12:15.02:167,15,0	1/1:13,0:12:17.18:170,17,0	1/1:8,0:4:5.69:50,6,0	1/1:17,0:15:21.01:236,21,0	1/1:3,0:12:18.05:225,18,0	1/1:4,18:21:54.15:978,54,0	1/1:6,10:15:6.91:585,7,0	1/1:3,14:17:27.09:554,27,0	0/1:8,6:14:14.85:544,0,15	1/1:2,11:13:15.05:308,15,0	1/1:9,0:9:11.74:74,12,0	1/1:9,5:13:33.10:643,33,0	1/1:14,11:24:60.17:1120,60,0	1/1:13,6:17:33.11:637,33,0	1/1:16,0:13:14.94:181,15,0	1/1:14,0:5:8.86:56,9,0	./.	1/1:3,11:14:33.03:589,33,0	1/1:3,14:14:18.06:371,18,0	0/1:5,10:15:6.47:348,0,6	1/1:5,23:27:42.14:866,42,0	1/1:6,19:25:57.18:1135,57,0	1/1:27,0:27:62.11:579,62,0	1/1:2,0:2:3.01:59,3,0
chr10	31715676	.	A	AC	1345.40	PASS	AB=0.949;AC=27;AF=0.500;AN=54;BaseQRankSum=2.658;DP=411;FS=2.739;HRun=0;HaplotypeScore=112.7869;InbreedingCoeff=-0.4090;MQ=59.63;MQ0=7;MQRankSum=2.915;QD=3.77;ReadPosRankSum=8.014;VQSLOD=2.7825;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:21,0:19:37.68:38,0,150	0/1:4,2:3:14.07:14,0,35	0/0:23,0:15:44.35:0,44,508	0/0:15,0:10:14.15:0,14,198	0/1:11,1:8:27.97:49,0,28	0/1:9,2:9:37.23:37,0,100	0/1:5,1:2:14.21:14,0,35	0/1:20,0:18:9.32:9,0,263	0/1:8,0:8:20.81:21,0,67	0/1:21,0:20:57.75:110,0,58	0/1:18,0:15:55.53:56,0,94	1/1:14,0:14:21.01:68,21,0	0/1:12,0:12:23.35:72,0,23	1/1:10,0:10:11.86:39,12,0	0/1:5,0:5:26.68:60,0,27	1/1:12,0:11:27.24:112,27,0	0/1:28,0:27:99:127,0,302	0/1:19,0:17:78:78,0,86	0/0:12,0:9:21.03:0,21,252	0/1:11,2:4:23.94:24,0,64	./.	1/1:12,0:12:14.19:102,14,0	0/1:21,0:18:8.96:9,0,266	0/1:12,0:12:17.67:28,0,18	0/1:27,0:25:65.29:65,0,121	0/1:24,0:23:46.94:133,0,47	0/1:18,6:24:99:247,0,190	0/0:2,0:2:6.01:0,6,67
chr10	31715716	.	G	GAA	6135.30	PASS	AB=0.875;AC=35;AF=0.648;AN=54;BaseQRankSum=-7.432;DP=453;FS=1.277;HRun=9;HaplotypeScore=94.2636;InbreedingCoeff=0.7639;MQ=46.92;MQ0=26;MQRankSum=2.491;QD=23.69;ReadPosRankSum=0.586;VQSLOD=4.4772;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,11:19:44.34:573,44,0	0/0:4,1:3:2.55:0,3,11	0/0:38,0:4:2.46:0,2,13	0/0:46,0:19:25.26:0,25,197	0/0:15,0:11:7.89:0,8,32	0/0:10,0:9:9.13:0,9,49	1/1:10,0:7:2.47:9,2,0	0/0:26,0:26:40.06:0,40,349	0/1:6,0:7:2.08:3,0,2	1/1:10,6:19:40.57:476,41,0	1/1:12,9:15:30.08:415,30,0	1/1:9,4:13:19.77:260,20,0	1/1:3,6:8:24.08:366,24,0	1/1:8,3:11:27.07:374,27,0	1/1:2,0:3:2.69:8,3,0	1/1:3,8:11:18.06:277,18,0	1/1:5,19:27:49.71:724,50,0	1/1:2,14:14:27.09:406,27,0	0/0:20,0:14:15.70:0,16,149	0/0:9,0:4:2.79:0,3,13	./.	1/1:4,2:4:8.75:84,9,0	1/1:11,4:15:29.53:369,30,0	1/1:6,0:6:7.24:170,7,0	1/1:19,9:25:54.17:785,54,0	1/1:19,4:23:42.34:559,42,0	0/0:17,0:19:8.31:0,8,36	1/1:1,8:10:18.06:277,18,0
chr10	31715717	.	AAAAAAAAAG	A	2184.41	PASS	AB=1.000;AC=19;AF=0.352;AN=54;BaseQRankSum=-1.379;DP=453;FS=3.755;HRun=0;HaplotypeScore=144.2156;InbreedingCoeff=0.8015;MQ=46.78;MQ0=25;MQRankSum=-1.337;QD=17.62;ReadPosRankSum=-0.354;VQSLOD=2.8427;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:19:46.86:0,47,1213	0/1:5,0:3:13.45:40,0,13	0/0:38,0:4:6.48:0,6,18	0/0:50,0:19:14.11:0,14,320	1/1:16,0:12:12.04:173,12,0	1/1:10,0:9:18.06:254,18,0	1/1:9,0:7:2.30:17,2,0	1/1:6,20:26:56.85:888,57,0	1/1:7,0:6:8.87:65,9,0	0/0:19,0:19:34.85:0,35,1008	0/0:21,0:15:33.04:0,33,878	0/0:13,0:13:20.53:0,21,394	0/0:9,0:8:16.09:0,16,526	0/0:11,0:11:28.15:0,28,478	1/1:3,0:3:5.91:49,6,0	0/0:12,0:12:21.07:0,21,712	0/0:25,0:25:46.02:0,46,1539	0/0:16,0:14:27.02:0,27,861	1/1:10,10:14:27.04:606,27,0	1/1:4,5:4:5.99:103,6,0	./.	0/0:7,0:5:12.02:0,12,209	0/0:15,0:14:26.29:0,26,716	0/0:6,0:6:10.69:0,11,180	0/0:27,0:24:42.04:0,42,1048	0/0:24,0:24:44.44:0,44,955	1/1:9,10:18:10.91:184,11,0	0/0:10,0:10:19.31:0,19,674
chr10	31715718	.	AAAAAAAAG	A	1917.44	PASS	AB=0.906;AC=18;AF=0.333;AN=54;BaseQRankSum=-0.871;DP=453;FS=9.119;HRun=0;HaplotypeScore=137.6544;InbreedingCoeff=0.4986;MQ=46.71;MQ0=24;MQRankSum=-0.955;QD=14.64;ReadPosRankSum=-0.848;VQSLOD=1.7217;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:19:13.51:0,14,1070	0/1:2,3:3:10.25:102,0,10	0/0:39,0:5:11.67:0,12,81	0/0:50,0:19:28.72:0,29,381	1/1:6,10:12:14.84:318,15,0	1/1:2,8:9:18.06:452,18,0	1/1:1,8:7:2.14:49,2,0	0/1:26,0:26:60.69:377,0,61	1/1:7,0:6:9.02:141,9,0	0/0:18,0:18:1.64:0,2,860	0/0:21,0:15:33.09:0,33,817	0/0:13,0:13:14.14:0,14,321	0/1:9,0:8:2.05:2,0,442	0/0:11,0:11:17.72:0,18,434	1/1:3,0:3:6.02:115,6,0	0/0:12,0:12:21.06:0,21,627	0/0:26,0:26:43.43:0,43,1459	0/0:16,0:14:25.91:0,26,740	0/1:20,0:14:26.87:348,0,27	1/1:8,0:4:5.99:77,6,0	./.	0/0:7,0:5:12.03:0,12,202	0/0:15,0:14:20.45:0,20,647	0/0:6,0:6:2.03:0,2,190	0/0:27,0:24:13.29:0,13,935	0/0:23,0:23:25.29:0,25,900	1/1:18,0:18:2.30:107,2,0	0/0:10,0:10:19.31:0,19,613
chr10	31715833	.	G	GTT	6243.19	PASS	AB=1.000;AC=43;AF=0.768;AN=56;BaseQRankSum=-5.921;DP=438;FS=4.533;HRun=10;HaplotypeScore=67.3347;InbreedingCoeff=0.8013;MQ=71.54;MQ0=5;MQRankSum=1.114;QD=19.33;ReadPosRankSum=4.107;VQSLOD=3.6419;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,19:27:44.09:561,44,0	1/1:0,0:2:4.87:17,5,0	0/1:24,0:18:10.55:11,0,230	0/0:24,0:16:29.75:0,30,212	1/1:6,0:16:27.81:114,28,0	1/1:0,0:2:4.99:18,5,0	1/1:3,0:13:24.83:87,25,0	0/0:24,0:24:28.99:0,29,453	1/1:2,0:4:4.87:17,5,0	1/1:4,10:16:32.54:396,33,0	1/1:11,9:20:37.61:463,38,0	1/1:3,3:5:15.03:185,15,0	1/1:3,10:12:11.53:143,12,0	1/1:2,3:5:8.51:90,9,0	1/1:4,0:10:9.71:34,10,0	1/1:3,7:10:21.06:295,21,0	1/1:2,31:34:86.73:1235,87,0	1/1:2,19:24:43.49:564,43,0	0/0:17,0:16:36:0,36,402	0/0:12,0:12:27.02:0,27,266	0/0:11,0:12:27.03:0,27,275	1/1:2,4:7:9.03:126,9,0	1/1:4,10:16:27.01:347,27,0	1/1:4,19:25:33.10:460,33,0	1/1:1,9:11:18.53:255,19,0	1/1:5,13:18:39.11:558,39,0	0/0:26,0:22:48.04:0,48,484	1/1:1,8:9:18.06:268,18,0
chr10	31715852	.	CT	C	272.39	PASS	AB=0.846;AC=5;AF=0.096;AN=52;BaseQRankSum=0.518;DP=393;FS=3.332;HRun=8;HaplotypeScore=71.8646;InbreedingCoeff=0.6875;MQ=69.21;MQ0=5;MQRankSum=-3.039;QD=5.67;ReadPosRankSum=-1.954;VQSLOD=0.1904;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:27:60.09:0,60,659	./.	0/0:25,0:17:21.84:0,22,240	0/1:18,0:11:5.63:6,0,36	1/1:5,9:13:7.97:100,8,0	0/0:2,1:3:0.89:0,1,2	1/1:4,8:12:32.88:282,33,0	0/0:20,0:17:29.68:0,30,221	./.	0/0:19,0:19:42.11:0,42,488	0/0:17,0:17:44.98:0,45,491	0/0:9,0:7:20.85:0,21,230	0/0:10,0:8:21.06:0,21,254	0/0:10,0:9:24.07:0,24,290	0/0:3,0:3:5.99:0,6,50	0/0:9,0:9:18.06:0,18,217	0/0:35,0:34:90.06:0,90,1062	0/0:25,0:23:48.15:0,48,580	0/0:12,0:11:14.71:0,15,90	0/0:11,0:7:17.82:0,18,136	0/0:13,0:11:23.67:0,24,159	0/0:5,0:5:12.04:0,12,145	0/0:14,0:13:24.50:0,25,274	0/0:24,0:24:48.08:0,48,550	0/0:10,0:10:17.98:0,18,168	0/0:12,0:11:27.06:0,27,298	0/0:15,0:12:32.45:0,32,219	0/0:10,0:10:27.07:0,27,314
chr10	31715860	.	T	TC	931.22	PASS	AB=1.000;AC=11;AF=0.212;AN=52;BaseQRankSum=-2.200;DP=417;FS=0.765;HRun=4;HaplotypeScore=70.1008;InbreedingCoeff=0.7974;MQ=62.90;MQ0=15;MQRankSum=-3.592;QD=9.70;ReadPosRankSum=2.158;VQSLOD=0.8280;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:27:48.10:0,48,515	./.	0/1:26,0:10:10.40:10,0,91	0/0:21,0:9:7.12:0,7,51	0/0:15,0:13:11.61:0,12,68	0/0:8,0:8:11.87:0,12,83	0/0:18,0:13:23.11:0,23,128	1/1:9,8:11:15.05:198,15,0	0/0:4,0:3:2.98:0,3,21	0/0:22,0:22:45.06:0,45,474	0/0:21,0:21:41.81:0,42,451	0/0:9,0:8:21.02:0,21,229	0/0:11,0:9:24.06:0,24,264	0/0:12,0:11:33.06:0,33,346	./.	0/0:9,0:9:11.47:0,11,184	0/0:34,0:33:93.20:0,93,1009	0/0:26,0:24:54.08:0,54,576	1/1:3,6:6:15.05:198,15,0	1/1:2,12:10:11.97:137,12,0	1/1:5,9:12:15.05:199,15,0	0/0:7,0:7:18:0,18,175	0/0:11,0:10:24.06:0,24,263	0/0:27,0:27:57.03:0,57,588	0/0:11,0:11:17.98:0,18,163	0/0:13,0:10:24.05:0,24,255	1/1:3,13:13:27.09:356,27,0	0/0:9,0:9:24.07:0,24,270
chr10	31715987	.	ACGAGC	A	1745.57	PASS	AB=0.977;AC=12;AF=0.214;AN=56;BaseQRankSum=8.496;DP=505;FS=12.459;HRun=0;HaplotypeScore=80.2526;InbreedingCoeff=0.7239;MQ=55.65;MQ0=24;MQRankSum=-7.343;QD=15.73;ReadPosRankSum=-0.883;VQSLOD=1.9869;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,99,3146	0/0:4,0:4:12.04:0,12,344	0/0:29,0:4:6.02:0,6,102	0/1:31,0:5:5.31:5,0,130	0/0:9,1:8:15.05:0,15,475	0/0:10,0:10:21.03:0,21,575	0/0:17,0:15:39.13:0,39,1114	1/1:1,13:11:27.09:589,27,0	0/0:15,0:14:33.07:0,33,962	0/0:19,0:19:54.19:0,54,1693	0/0:16,0:13:36.11:0,36,1066	0/0:24,0:23:66.23:0,66,1972	0/0:19,0:17:42.12:0,42,1351	0/0:16,0:15:45.15:0,45,1393	0/0:16,0:15:42.14:0,42,1248	0/0:18,0:18:54.19:0,54,1734	0/0:40,0:40:99:0,111,3508	0/0:15,0:13:30.10:0,30,969	1/1:2,5:6:9.03:173,9,0	1/1:0,7:5:9.03:200,9,0	1/1:0,15:13:12.51:269,13,0	0/0:22,0:20:60.21:0,60,1936	0/1:20,1:21:10.33:10,0,1632	0/0:22,0:22:48.12:0,48,1417	0/0:16,0:16:45.15:0,45,1454	0/0:21,0:21:63.22:0,63,1985	1/1:0,16:11:30.10:668,30,0	0/0:6,0:6:2.75:0,3,96
chr10	31716597	.	GTAGAAGCTGCCC	G	2100.55	PASS	AB=0.611;AC=9;AF=0.161;AN=56;BaseQRankSum=7.394;DP=634;FS=9.641;HRun=0;HaplotypeScore=216.3605;InbreedingCoeff=0.7816;MQ=75.69;MQ0=0;MQRankSum=-6.827;QD=33.34;ReadPosRankSum=1.531;VQSLOD=2.1142;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:65,0:63:99:0,181,9780	1/1:0,9:6:9.03:342,9,0	0/0:33,0:33:93.32:0,93,4721	0/0:26,0:26:67.77:0,68,3263	1/1:1,16:14:32.74:1231,33,0	1/1:0,7:4:3.01:114,3,0	1/1:5,14:13:9.03:342,9,0	0/0:23,0:23:54.14:0,54,2002	0/1:4,7:8:33.90:219,0,34	0/0:36,0:36:99:0,102,5655	0/0:20,0:20:57.20:0,57,3520	0/0:27,0:27:81.28:0,81,4581	0/0:30,0:29:78.27:0,78,4422	0/0:21,0:21:63.22:0,63,3812	0/0:30,0:24:63.20:0,63,3118	0/0:17,0:16:51.16:0,51,2873	0/0:27,0:26:75.23:0,75,4351	0/0:16,0:16:48.16:0,48,2817	0/0:18,0:17:36.10:0,36,1507	0/0:20,0:19:54.18:0,54,2743	0/0:41,0:41:99:0,114,5600	0/0:21,0:21:63.22:0,63,3649	0/0:16,0:16:48.16:0,48,2721	0/0:25,0:24:72.25:0,72,4196	0/0:17,0:17:51.18:0,51,2724	0/0:19,0:19:54.19:0,54,3288	0/0:16,0:11:24.08:0,24,1170	0/0:7,0:7:21.07:0,21,1303
chr10	31716751	.	T	TA	9247.55	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=18.814;DP=698;FS=17.319;HRun=2;HaplotypeScore=142.1031;InbreedingCoeff=0.9995;MQ=63.99;MQ0=0;MQRankSum=-13.172;QD=33.38;ReadPosRankSum=-4.215;VQSLOD=1.9933;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,120,1485	1/1:2,13:13:24.08:330,24,0	0/0:26,0:26:78.21:0,78,920	0/0:22,0:21:57.17:0,57,684	1/1:3,16:15:30.06:402,30,0	1/1:1,17:19:54.14:736,54,0	1/1:3,26:29:72.20:977,72,0	1/1:5,23:27:78.13:996,78,0	1/1:6,27:33:75.25:1045,75,0	0/0:32,0:31:90.28:0,90,1115	0/0:21,0:21:60.18:0,60,731	0/0:19,0:19:57.18:0,57,705	0/0:25,0:25:72.23:0,72,893	0/0:31,0:31:90.28:0,90,1116	1/1:2,29:31:90.26:1237,90,0	0/0:20,0:20:57.15:0,57,690	0/0:27,0:27:78.25:0,78,966	0/0:13,0:13:30.09:0,30,372	1/1:2,24:26:75.24:1020,75,0	1/1:3,24:20:48.16:678,48,0	1/1:1,18:19:51.08:671,51,0	0/0:29,0:29:84.26:0,84,1041	0/0:21,0:21:54.17:0,54,669	0/0:35,0:35:99:0,99,1227	0/0:21,0:21:63.20:0,63,779	0/0:28,0:28:84.23:0,84,1013	1/1:9,22:31:84.28:1157,84,0	0/0:11,0:11:30.09:0,30,372
chr10	31716785	.	C	CCT	8920.48	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=14.901;DP=611;FS=3.435;HRun=0;HaplotypeScore=154.3397;InbreedingCoeff=0.9244;MQ=71.96;MQ0=1;MQRankSum=-17.731;QD=41.30;ReadPosRankSum=0.029;VQSLOD=5.8205;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:78.26:0,78,1133	1/1:0,7:5:15.05:277,15,0	0/0:18,0:18:48.14:0,48,677	0/0:27,0:27:72.19:0,72,970	1/1:0,13:12:21.07:389,21,0	1/1:2,13:15:42.14:760,42,0	1/1:3,18:21:48.16:892,48,0	1/1:6,17:23:63.19:1113,63,0	1/1:6,22:26:69.22:1247,69,0	0/0:28,0:28:81.24:0,81,1137	0/0:23,0:23:63.17:0,63,869	0/0:17,0:17:48.16:0,48,707	0/0:27,0:27:75.25:0,75,1104	0/0:36,0:36:99:0,102,1460	1/1:4,15:18:54.17:957,54,0	0/0:26,0:26:78.26:0,78,1146	0/0:32,0:32:90.28:0,90,1279	0/1:14,0:14:16.92:17,0,450	1/1:3,13:14:39.12:679,39,0	1/1:4,18:16:45.14:795,45,0	1/1:5,9:14:30.05:477,30,0	0/0:30,0:30:78.24:0,78,1108	0/0:20,0:20:54.18:0,54,792	0/0:29,0:29:81.23:0,81,1167	0/0:23,0:23:69.23:0,69,1014	0/0:23,0:23:63.21:0,63,928	1/1:2,22:24:72.25:1320,72,0	0/0:8,0:8:24.08:0,24,353
chr10	31716786	.	CTG	C	57.04	PASS	AB=0.958;AC=7;AF=0.125;AN=56;BaseQRankSum=7.487;DP=601;FS=0.000;HRun=0;HaplotypeScore=179.5996;InbreedingCoeff=0.0450;MQ=72.82;MQ0=2;MQRankSum=-4.395;QD=0.56;ReadPosRankSum=-2.889;VQSLOD=1.3578;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:78.27:0,78,1506	1/1:7,0:5:2.36:4,2,0	0/0:18,0:18:51.17:0,51,973	0/0:26,0:26:75.24:0,75,1329	0/0:13,0:12:7.82:0,8,45	0/0:15,0:15:8.77:0,9,71	0/0:21,1:21:20.82:0,21,131	0/0:22,0:22:29.15:0,29,359	0/1:26,0:24:11.29:11,0,65	0/0:28,0:28:84.27:0,84,1539	0/0:24,0:24:66.20:0,66,1200	0/0:17,0:17:48.16:0,48,927	0/0:27,0:27:78.27:0,78,1506	0/0:35,0:35:99:0,105,1991	0/1:18,2:19:38.84:61,0,39	0/0:26,0:26:78.27:0,78,1497	0/0:31,0:31:93.32:0,93,1791	0/0:14,0:14:39.13:0,39,751	0/1:15,0:13:26.05:26,0,90	0/1:20,1:15:34.61:35,0,53	0/1:12,1:13:20.48:39,0,20	0/0:29,0:29:81.25:0,81,1490	0/0:20,0:20:54.19:0,54,1042	0/0:28,0:28:84.29:0,84,1608	0/0:23,0:23:69.24:0,69,1332	0/0:23,0:23:63.22:0,63,1218	0/0:24,0:24:18.68:0,19,150	0/0:8,0:8:24.08:0,24,464
chr10	31716791	.	T	TTCTATCCTGATGTG	37338.92	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=16.427;DP=671;FS=2.196;HRun=0;HaplotypeScore=289.0596;InbreedingCoeff=0.9993;MQ=71.45;MQ0=2;MQRankSum=-19.176;QD=138.29;ReadPosRankSum=-0.070;VQSLOD=4.1548;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:81.25:0,81,3050	1/1:5,6:9:27.05:1370,27,0	0/0:19,0:19:54.14:0,54,1780	0/0:27,0:27:75.24:0,75,2626	1/1:12,7:18:27.09:1664,27,0	1/1:14,8:22:48.16:2878,48,0	1/1:23,6:28:57.20:3482,57,0	1/1:37,0:37:99:6127,111,0	1/1:14,17:29:87.30:5250,87,0	0/0:25,0:25:72.25:0,72,2906	0/0:22,0:22:66.23:0,66,2593	0/0:18,0:18:51.18:0,51,2040	0/0:27,0:27:81.26:0,81,2972	0/0:33,0:33:96.33:0,96,3967	1/1:21,6:27:63.21:3734,63,0	0/0:27,0:27:78.25:0,78,3068	0/0:31,0:31:90.30:0,90,3525	0/0:15,0:15:42.14:0,42,1600	1/1:15,6:19:57.20:3370,57,0	1/1:9,13:17:33.11:2185,33,0	1/1:16,3:19:30.10:1745,30,0	0/0:25,0:25:66.22:0,66,2581	0/0:19,0:19:48.16:0,48,1935	0/0:32,0:32:90.25:0,90,3479	0/0:24,0:24:66.22:0,66,2543	0/0:21,0:21:63.22:0,63,2674	1/1:19,12:31:90.27:5533,90,0	0/0:8,0:8:24.08:0,24,1010
chr10	31717054	.	C	CA	7093.38	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=16.498;DP=593;FS=2.340;HRun=6;HaplotypeScore=153.1638;InbreedingCoeff=0.9985;MQ=79.87;MQ0=0;MQRankSum=-10.043;QD=31.25;ReadPosRankSum=0.290;VQSLOD=2.5513;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:78.15:0,78,787	1/1:0,13:13:39.12:486,39,0	0/0:18,0:18:36.04:0,36,358	0/0:16,0:15:20.71:0,21,189	1/1:4,20:24:49.70:597,50,0	1/1:0,24:24:66.21:823,66,0	1/1:4,16:20:48.11:579,48,0	1/1:4,18:22:51.16:633,51,0	1/1:1,17:18:51.16:634,51,0	0/0:23,0:23:57.11:0,57,572	0/0:28,0:28:72.13:0,72,725	0/0:23,0:23:60.11:0,60,604	0/0:18,0:18:48.11:0,48,490	0/0:13,0:13:36.08:0,36,367	1/1:0,15:16:44.97:537,45,0	0/0:23,0:23:66.12:0,66,659	0/0:25,0:25:66.14:0,66,673	0/0:17,0:17:51.12:0,51,520	1/1:5,13:18:21.53:464,22,0	1/1:2,24:26:72.13:860,72,0	1/1:2,15:17:39.12:486,39,0	0/0:26,0:26:75.17:0,75,765	0/0:24,0:24:57.12:0,57,582	0/0:20,0:20:57.13:0,57,582	0/0:22,0:22:54.09:0,54,543	0/0:33,0:33:96.21:0,96,974	1/1:2,27:29:81.23:994,81,0	0/0:8,0:8:24.05:0,24,244
chr10	31717386	.	G	GTT	6846.58	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=1.491;DP=583;FS=0.722;HRun=9;HaplotypeScore=77.9171;InbreedingCoeff=0.9962;MQ=82.14;MQ0=0;MQRankSum=-2.230;QD=32.60;ReadPosRankSum=-1.651;VQSLOD=4.7010;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,102,1057	1/1:1,4:6:14.54:193,15,0	0/0:28,0:28:44.10:0,44,466	0/0:26,0:21:40.41:0,40,398	1/1:3,19:23:50.62:721,51,0	1/1:1,20:21:51.17:785,51,0	1/1:3,16:21:44.63:635,45,0	1/1:6,13:22:42.13:608,42,0	1/1:1,21:24:54.14:772,54,0	0/0:23,0:23:63.16:0,63,671	0/0:18,0:18:51.11:0,51,543	0/0:14,0:14:42.11:0,42,447	0/0:20,0:20:54.12:0,54,575	0/0:26,0:26:69.14:0,69,719	1/1:1,16:18:45.15:693,45,0	0/0:16,0:16:45.11:0,45,479	0/0:36,0:36:96.19:0,96,1012	0/0:15,0:15:42.10:0,42,446	1/1:4,16:21:53.67:787,54,0	1/1:5,21:26:62.28:820,62,0	1/1:2,13:15:33.11:508,33,0	0/0:15,0:15:42.10:0,42,447	0/0:21,0:21:60.13:0,60,630	0/0:27,0:29:63.05:0,63,781	0/0:21,0:21:48.06:0,48,499	0/0:21,0:22:51.08:0,51,598	1/1:4,9:13:21.06:323,21,0	0/0:7,0:7:21.05:0,21,223
chr10	31717555	.	TA	T	8887.03	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=7.687;DP=661;FS=0.935;HRun=4;HaplotypeScore=89.8027;InbreedingCoeff=0.9996;MQ=83.25;MQ0=0;MQRankSum=-1.531;QD=32.55;ReadPosRankSum=-0.985;VQSLOD=4.6918;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:66.19:0,66,889	1/1:0,18:18:51.16:612,51,0	0/0:24,0:24:61.75:0,62,812	0/0:16,0:15:26:0,26,396	1/1:1,34:35:99:1223,102,0	1/1:1,22:23:63.19:756,63,0	1/1:1,25:26:63.19:756,63,0	1/1:2,33:35:99:1134,99,0	1/1:0,19:19:57.17:684,57,0	0/0:27,0:27:78.23:0,78,1058	0/0:27,0:27:78.23:0,78,1058	0/0:22,0:22:63.21:0,63,882	0/0:32,0:32:93.30:0,93,1267	0/0:18,0:18:51.14:0,51,680	1/1:0,26:26:69.21:828,69,0	0/0:9,0:9:27.08:0,27,361	0/0:29,0:29:81.20:0,81,1075	0/0:27,0:27:78.25:0,78,1075	1/1:4,18:22:54.14:627,54,0	1/1:1,31:32:93.28:1116,93,0	1/1:1,13:14:39.12:468,39,0	0/0:29,0:29:84.26:0,84,1143	0/0:24,0:24:72.22:0,72,976	0/0:19,0:19:57.19:0,57,795	0/0:25,0:25:75.25:0,75,1050	0/0:26,0:26:75.24:0,75,1020	1/1:2,21:23:57.17:684,57,0	0/0:11,0:11:33.11:0,33,461
chr10	31717965	.	C	CATT	11897.07	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-4.970;DP=518;FS=1.537;HRun=0;HaplotypeScore=68.4243;InbreedingCoeff=0.9959;MQ=73.86;MQ0=2;MQRankSum=-4.675;QD=54.08;ReadPosRankSum=2.026;VQSLOD=7.1292;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:57.19:0,57,947	1/1:0,13:13:30.10:691,30,0	0/0:9,0:10:21.71:0,22,335	0/0:10,0:10:24.06:0,24,346	1/1:1,28:25:72.20:1605,72,0	1/1:3,25:27:72.16:1560,72,0	1/1:0,12:12:30.03:638,30,0	1/1:6,20:26:63.22:1438,63,0	1/1:0,21:22:57.20:1313,57,0	0/0:33,0:33:96.31:0,96,1575	0/0:21,0:21:57.15:0,57,893	0/0:18,0:18:54.17:0,54,894	0/0:21,0:21:63.21:0,63,1049	0/0:17,0:17:51.15:0,51,796	1/1:1,14:15:39.13:898,39,0	0/0:24,0:24:69.22:0,69,1149	0/0:20,0:20:54.16:0,54,886	0/0:19,0:19:54.18:0,54,906	1/1:2,9:11:27.09:622,27,0	1/1:1,18:21:51.09:1075,51,0	1/1:2,13:15:30.10:675,30,0	0/0:7,0:7:18.05:0,18,284	0/0:17,0:17:51.17:0,51,869	0/0:6,0:6:18.06:0,18,307	0/0:24,0:24:72.23:0,72,1201	0/0:23,0:23:63.21:0,63,1049	1/1:2,25:25:60.21:1382,60,0	0/0:8,0:8:21.07:0,21,358
chr10	31719319	.	CCACACACACACACA	C	8538.92	PASS	AB=0.794;AC=45;AF=0.865;AN=52;BaseQRankSum=2.870;DP=540;FS=10.559;HRun=0;HaplotypeScore=214.5797;InbreedingCoeff=0.1983;MQ=61.58;MQ0=12;MQRankSum=-4.832;QD=17.86;ReadPosRankSum=-0.790;VQSLOD=2.6750;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:12,6:18:3.01:52,3,0	./.	0/0:22,0:14:0.89:0,1,2	./.	1/1:17,0:27:3.40:185,3,0	1/1:13,0:22:8.87:67,9,0	0/1:13,0:13:14.23:18,0,14	1/1:22,0:21:3:28,3,0	1/1:13,0:26:18.75:234,19,0	0/1:14,9:23:28.01:321,0,28	1/1:13,14:27:6.87:810,7,0	1/1:5,11:17:15.05:531,15,0	1/1:5,12:17:20.73:730,21,0	1/1:9,10:19:15.05:456,15,0	0/0:16,0:16:18.06:0,18,715	1/1:10,8:20:32.14:1026,32,0	1/1:14,6:18:11.87:243,12,0	0/1:11,6:18:44.05:384,0,44	1/1:15,0:16:7.98:167,8,0	1/1:14,1:24:21.45:629,21,0	1/1:19,0:18:4.23:25,4,0	1/1:4,7:11:11.05:501,11,0	1/1:5,10:16:12.04:176,12,0	1/1:16,11:27:2.97:20,3,0	1/1:7,10:17:12:292,12,0	1/1:14,9:24:18.05:746,18,0	1/1:16,0:23:21.07:466,21,0	1/1:2,5:7:12.04:430,12,0
chr10	31719366	.	C	CAG	2815.85	PASS	AB=0.568;AC=21;AF=0.375;AN=56;BaseQRankSum=5.634;DP=631;FS=1.945;HRun=0;HaplotypeScore=160.5882;InbreedingCoeff=0.9124;MQ=62.43;MQ0=20;MQRankSum=-1.431;QD=12.86;ReadPosRankSum=1.376;VQSLOD=3.7278;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:19:20.87:0,21,158	1/1:5,0:5:14.98:125,15,0	0/0:35,0:16:47.12:0,47,421	0/0:44,0:30:83.04:0,83,801	1/1:20,0:20:32.13:256,32,0	1/1:23,0:23:38.70:298,39,0	1/1:11,0:10:17.50:123,18,0	1/1:22,0:22:62.82:531,63,0	1/1:24,0:24:44.16:288,44,0	0/0:25,0:24:56.66:0,57,471	0/0:26,0:26:50.71:0,51,393	0/0:22,0:22:36.31:0,36,283	0/0:23,0:23:44.79:0,45,364	0/0:21,0:21:41.66:0,42,312	0/1:5,16:21:10.42:49,0,10	0/0:17,0:17:38.88:0,39,301	0/0:21,0:21:29.16:0,29,208	0/0:24,0:23:48.57:0,49,319	1/1:21,0:21:55.08:430,55,0	1/1:30,0:30:65.13:460,65,0	1/1:20,0:18:17.62:144,18,0	0/0:23,0:23:53.81:0,54,431	0/0:21,0:21:29.88:0,30,232	0/0:24,0:24:7.46:0,7,63	0/0:28,0:28:47.71:0,48,371	0/0:30,0:29:71.41:0,71,603	1/1:22,0:22:50.49:331,50,0	0/0:8,0:8:20.91:0,21,166
chr10	31721113	.	T	TTCTCTCTC	4707.44	PASS	AB=0.995;AC=45;AF=0.833;AN=54;BaseQRankSum=-5.429;DP=650;FS=5.991;HRun=0;HaplotypeScore=215.7552;InbreedingCoeff=-0.0855;MQ=65.90;MQ0=3;MQRankSum=-1.730;QD=7.90;ReadPosRankSum=-0.144;VQSLOD=3.2014;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:25:2.91:24,3,0	0/1:15,0:15:50.45:50,0,192	./.	0/0:30,0:18:1.82:0,2,5	0/1:25,0:25:86.22:86,0,270	0/1:11,0:11:13.39:62,0,13	0/1:15,0:15:10.10:10,0,20	1/1:41,0:41:31.42:200,31,0	0/1:20,0:20:26:26,0,113	0/1:28,0:29:22.18:176,0,22	1/1:14,4:22:2.21:33,2,0	1/1:23,0:23:14.94:118,15,0	1/1:11,12:30:3.01:112,3,0	1/1:22,0:22:18.02:257,18,0	1/1:32,0:33:44.80:464,45,0	1/1:20,0:19:15.01:205,15,0	1/1:21,0:21:6.25:262,6,0	1/1:7,1:9:17.99:291,18,0	1/1:32,0:32:23.16:154,23,0	1/1:22,0:19:8.91:75,9,0	1/1:11,0:11:6.01:79,6,0	1/1:23,0:23:12.01:130,12,0	1/1:18,0:17:2.09:35,2,0	0/1:32,0:32:1.44:126,0,1	1/1:22,0:21:11.91:100,12,0	1/1:31,0:31:23.71:306,24,0	1/1:23,2:25:41.98:694,42,0	1/1:19,0:19:36.59:632,37,0
chr10	31721147	.	CTG	C	6826.15	PASS	AB=1.000;AC=48;AF=0.857;AN=56;BaseQRankSum=-5.370;DP=608;FS=1.322;HRun=0;HaplotypeScore=120.8812;InbreedingCoeff=0.3119;MQ=51.98;MQ0=12;MQRankSum=4.827;QD=12.78;ReadPosRankSum=-5.145;VQSLOD=3.8716;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:24:5.07:150,5,0	1/1:6,5:11:30.03:355,30,0	0/0:30,0:10:16.68:0,17,114	0/0:43,0:11:4.08:0,4,89	1/1:18,6:24:39.23:584,39,0	1/1:15,1:16:38.91:336,39,0	1/1:0,14:14:8.39:99,8,0	1/1:45,0:45:99:773,115,0	1/1:1,21:22:21.05:293,21,0	1/1:14,0:14:5.11:224,5,0	0/1:14,0:14:1.13:104,0,1	1/1:19,1:19:15.80:223,16,0	1/1:26,0:26:29.92:242,30,0	1/1:22,0:22:32.39:282,32,0	1/1:29,2:31:36.04:313,36,0	1/1:15,0:13:23.32:168,23,0	0/1:19,0:19:9.39:203,0,9	1/1:15,0:14:31.38:267,31,0	1/1:18,0:17:15.06:192,15,0	1/1:21,0:19:38.91:319,39,0	1/1:14,0:14:2.67:112,3,0	1/1:23,0:23:33.61:266,34,0	1/1:21,0:20:26.87:224,27,0	1/1:25,0:25:16.58:242,17,0	1/1:18,0:18:17.95:150,18,0	0/1:16,0:16:29.08:223,0,29	1/1:27,0:26:24.94:345,25,0	0/1:19,0:19:94.60:139,0,95
chr10	31723004	.	C	CTAAT	1214.71	PASS	AB=1.000;AC=6;AF=0.107;AN=56;BaseQRankSum=8.786;DP=735;FS=6.556;HRun=0;HaplotypeScore=189.3326;InbreedingCoeff=0.2305;MQ=53.32;MQ0=1;MQRankSum=-7.295;QD=9.49;ReadPosRankSum=2.961;VQSLOD=2.1256;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,120,1495	0/1:11,0:8:11.98:12,0,253	0/0:35,0:28:69.11:0,69,1297	0/0:28,0:27:66.10:0,66,1023	0/0:25,0:25:11.11:0,11,477	0/1:24,0:24:42.90:43,0,425	0/1:27,0:27:99:104,0,540	0/0:37,0:34:96.73:0,97,1457	0/1:27,0:27:99:138,0,327	0/0:29,0:27:71.74:0,72,909	0/0:21,0:16:36.06:0,36,439	0/0:15,0:15:45.13:0,45,567	0/0:22,0:22:58.02:0,58,712	0/0:28,0:28:80.55:0,81,1052	1/1:10,23:39:11.10:1044,11,0	0/0:26,0:26:75.22:0,75,1042	0/0:22,0:22:64.03:0,64,820	0/0:26,0:26:66.63:0,67,897	0/0:38,0:37:99:0,101,1298	0/0:32,0:26:67.93:0,68,811	0/0:23,0:23:41.04:0,41,654	0/0:23,0:18:54.09:0,54,684	0/0:16,0:11:28.60:0,29,389	0/0:27,0:27:60.90:0,61,766	0/0:31,0:24:65.97:0,66,886	0/0:31,0:30:86.37:0,86,1149	0/0:19,0:19:47.09:0,47,691	0/0:10,0:9:27:0,27,329
chr10	31723226	.	CT	C	5249.64	PASS	AB=0.556;AC=29;AF=0.518;AN=56;BaseQRankSum=-12.039;DP=573;FS=1.682;HRun=11;HaplotypeScore=110.2603;InbreedingCoeff=0.8816;MQ=82.91;MQ0=1;MQRankSum=0.486;QD=17.33;ReadPosRankSum=7.800;VQSLOD=4.3964;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,19:26:51.52:404,52,0	0/0:2,0:7:17.33:0,17,103	0/0:46,2:38:3.52:0,4,448	0/0:41,0:30:36.73:0,37,372	0/0:1,0:15:35.17:0,35,180	0/0:3,0:23:42.65:0,43,214	0/0:5,0:16:31.45:0,31,175	0/0:13,0:23:47.56:0,48,274	0/0:3,0:6:5.68:0,6,29	1/1:1,17:19:52.98:425,53,0	1/1:4,23:27:62.89:516,63,0	1/1:4,11:15:32.95:271,33,0	1/1:3,7:10:17.97:148,18,0	0/1:4,15:20:13.88:301,0,14	0/0:2,0:15:28.54:0,29,144	1/1:0,12:12:23.97:197,24,0	1/1:5,27:33:38.98:516,39,0	1/1:2,24:26:56.92:468,57,0	0/0:6,0:17:31.51:0,32,179	0/0:2,0:19:37.25:0,37,203	0/0:7,0:10:19.97:0,20,109	1/1:5,18:23:41.90:345,42,0	1/1:4,12:16:15.12:232,15,0	1/1:1,7:8:14.98:123,15,0	1/1:2,23:26:64.96:523,65,0	1/1:5,20:25:59.88:488,60,0	0/0:8,0:21:40.40:0,40,207	1/1:3,13:17:12:294,12,0
chr10	31723330	.	AGT	A	3580.64	PASS	AB=1.000;AC=40;AF=0.741;AN=54;BaseQRankSum=2.350;DP=564;FS=4.965;HRun=0;HaplotypeScore=106.5819;InbreedingCoeff=0.4935;MQ=61.15;MQ0=12;MQRankSum=2.365;QD=8.23;ReadPosRankSum=1.413;VQSLOD=3.2677;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,11:22:17.88:180,18,0	0/1:9,0:9:40.07:40,0,59	./.	0/0:25,0:15:0.47:0,0,1	0/1:29,0:29:27.24:74,0,27	0/1:22,0:22:14.94:190,0,15	1/1:14,0:14:5.27:27,5,0	0/0:30,0:28:11.35:0,11,85	1/1:17,0:17:17.97:154,18,0	1/1:20,5:25:19.63:166,20,0	1/1:9,9:18:11.86:133,12,0	1/1:16,5:22:14.82:133,15,0	1/1:13,5:18:17.87:179,18,0	1/1:7,6:14:17.71:161,18,0	1/1:19,0:18:28.30:139,28,0	1/1:10,5:14:9.02:100,9,0	1/1:23,19:43:59.66:607,60,0	1/1:11,6:17:24.06:265,24,0	0/0:18,0:17:4.33:0,4,24	0/1:16,0:16:0.07:0,0,0	0/0:18,0:16:4.81:0,5,30	1/1:11,6:17:11.86:114,12,0	1/1:8,15:23:27.07:300,27,0	1/1:11,6:18:17.88:180,18,0	1/1:8,9:16:21.06:233,21,0	1/1:20,2:23:14.81:127,15,0	0/0:19,0:19:14.88:0,15,124	1/1:11,1:11:7.09:78,7,0
chr10	31723363	.	GTGTGTA	G	871.24	PASS	AB=1.000;AC=8;AF=0.143;AN=56;BaseQRankSum=1.469;DP=583;FS=5.667;HRun=0;HaplotypeScore=147.7686;InbreedingCoeff=0.3578;MQ=49.52;MQ0=33;MQRankSum=-2.261;QD=9.57;ReadPosRankSum=0.946;VQSLOD=2.2433;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:23:41.84:0,42,504	0/1:7,0:7:9.97:10,0,153	0/0:56,0:8:13.99:0,14,128	0/0:59,0:9:13.73:0,14,131	0/1:14,0:14:62.62:63,0,179	0/1:24,0:24:99:112,0,395	1/1:14,0:14:5.81:31,6,0	0/0:24,0:23:63.62:0,64,793	0/0:14,0:14:23.93:0,24,212	0/0:14,0:14:14.25:0,14,358	0/0:18,0:17:27.49:0,27,327	0/0:17,0:17:35.45:0,35,409	0/1:12,0:12:37.53:38,0,363	0/0:19,0:19:41.65:0,42,530	1/1:1,18:19:32.14:758,32,0	0/0:13,0:12:27:0,27,319	0/0:39,0:38:84.36:0,84,1107	0/0:16,0:16:44.86:0,45,575	0/0:12,0:8:19.24:0,19,238	0/0:11,0:11:8.60:0,9,61	0/0:19,0:17:30.92:0,31,285	0/0:24,0:24:44.75:0,45,480	0/0:24,0:24:50.66:0,51,798	0/0:18,0:18:35.81:0,36,509	0/0:25,0:24:60:0,60,768	0/0:12,0:12:32.78:0,33,431	0/0:21,0:18:39.39:0,39,561	0/0:13,0:12:17.76:0,18,309
chr10	31723365	.	GTGTA	G	946.71	PASS	AB=0.955;AC=14;AF=0.250;AN=56;BaseQRankSum=5.375;DP=565;FS=1.122;HRun=0;HaplotypeScore=128.1238;InbreedingCoeff=0.0095;MQ=49.47;MQ0=33;MQRankSum=-1.420;QD=4.98;ReadPosRankSum=3.859;VQSLOD=2.3090;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:22:16.41:0,16,276	0/1:6,0:6:18.60:19,0,50	0/0:58,0:7:10.99:0,11,100	0/0:58,0:7:8.50:0,9,87	0/1:11,2:13:18.15:190,0,18	0/1:23,0:23:37.89:179,0,38	1/1:1,13:14:6.02:122,6,0	0/0:23,0:22:62.44:0,62,643	0/1:15,0:15:2.75:3,0,21	0/1:12,0:13:12.17:12,0,201	0/0:17,0:16:30.42:0,30,249	0/1:15,0:16:3.98:4,0,170	0/1:10,0:11:69.75:70,0,167	0/0:19,0:20:1.95:0,2,309	1/1:20,0:19:28.28:412,28,0	0/0:12,0:11:23.97:0,24,204	0/1:36,0:36:41.19:41,0,545	0/0:15,0:15:41.35:0,41,318	0/0:10,0:7:17.35:0,17,184	0/0:11,0:11:8.21:0,8,60	0/0:19,0:17:29.65:0,30,238	0/0:18,1:19:9.47:0,9,276	0/0:24,0:24:53.76:0,54,479	0/0:17,1:18:9.38:0,9,258	0/0:26,0:25:59.93:0,60,548	0/1:10,0:10:18.89:19,0,170	0/0:22,0:19:41.89:0,42,467	0/1:11,1:11:30.70:31,0,154
chr10	31723367	.	GTA	G	2053.15	PASS	AB=0.963;AC=25;AF=0.446;AN=56;BaseQRankSum=10.200;DP=577;FS=8.365;HRun=0;HaplotypeScore=111.6531;InbreedingCoeff=-0.0699;MQ=49.64;MQ0=32;MQRankSum=1.555;QD=5.87;ReadPosRankSum=6.760;VQSLOD=1.8220;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:23:26.29:26,0,167	0/1:4,2:6:8.20:108,0,8	0/0:58,0:7:10.99:0,11,100	0/0:61,0:8:6.99:0,7,84	1/1:8,4:12:13.83:285,14,0	1/1:17,7:24:65.99:755,66,0	1/1:14,0:14:5.59:55,6,0	0/0:26,0:26:68.79:0,69,602	1/1:0,13:13:18.06:270,18,0	0/1:12,0:14:35.78:36,0,121	0/1:20,0:19:25.46:25,0,185	0/1:15,1:17:33.98:34,0,140	0/1:12,0:12:80.27:80,0,93	0/1:19,0:20:0.39:0,0,202	1/1:19,0:18:30.03:276,30,0	0/1:12,0:11:6.46:6,0,100	0/1:36,0:36:99:131,0,183	0/1:16,0:16:48.24:48,0,105	0/0:10,0:7:14.03:0,14,139	0/0:10,0:10:8.46:0,8,60	0/0:20,0:18:30.06:0,30,230	0/0:19,0:19:7.02:0,7,200	0/1:25,0:25:45.35:45,0,195	0/1:18,0:18:14.03:14,0,123	0/1:25,0:24:7.12:7,0,268	0/1:9,0:9:15.11:15,0,97	0/0:22,0:19:39.46:0,39,308	0/1:13,0:12:10.94:11,0,126
chr10	31724631	.	A	ATGC	32408.23	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-9.751;DP=806;FS=3.856;HRun=0;HaplotypeScore=103.5609;InbreedingCoeff=0.9695;MQ=84.22;MQ0=0;MQRankSum=-10.311;QD=42.98;ReadPosRankSum=7.164;VQSLOD=6.0777;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,26:26:51.18:1087,51,0	1/1:0,9:11:23.66:511,24,0	0/0:31,0:31:66.19:0,66,944	0/0:21,0:21:51.15:0,51,747	1/1:3,33:38:78.27:1654,78,0	1/1:3,27:33:60.21:1279,60,0	1/1:4,30:34:69.22:1470,69,0	1/1:11,21:33:66.20:1294,66,0	1/1:7,29:36:81.28:1727,81,0	1/1:5,28:33:81.28:1669,81,0	1/1:4,26:30:63.22:1336,63,0	1/1:2,26:28:63.22:1343,63,0	1/1:3,19:24:51.18:1079,51,0	1/1:4,21:26:54.19:1152,54,0	1/1:5,39:44:32.15:1553,32,0	1/1:4,33:40:81.28:1727,81,0	1/1:1,28:29:66.22:1407,66,0	1/1:4,21:26:45.15:959,45,0	1/1:11,26:38:78.20:1475,78,0	1/1:6,18:24:48.16:1016,48,0	1/1:4,32:36:66.23:1408,66,0	1/1:2,22:24:39.13:831,39,0	1/1:5,20:25:48.16:1019,48,0	1/1:1,26:27:60.20:1279,60,0	1/1:6,19:26:39.13:832,39,0	1/1:3,26:30:81.22:1600,81,0	1/1:5,23:29:72.25:1510,72,0	1/1:1,3:4:9.03:192,9,0
chr10	31725528	.	GTGTGTGTGTGTGAA	G	580.89	PASS	AB=1.000;AC=21;AF=0.500;AN=42;BaseQRankSum=-1.783;DP=230;FS=7.845;HRun=0;HaplotypeScore=66.3342;InbreedingCoeff=-0.0079;MQ=33.30;MQ0=48;MQRankSum=-0.135;QD=5.05;ReadPosRankSum=0.404;VQSLOD=0.6112;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/1:6,0:5:6.94:7,0,195	./.	./.	./.	0/1:14,0:12:20.41:20,0,229	0/0:15,0:12:11.33:0,11,311	0/1:16,0:10:48.86:49,0,271	0/0:7,0:4:6:0,6,65	1/1:3,1:4:8.36:152,8,0	0/0:4,0:4:1.41:0,1,3	1/1:1,4:4:3.01:118,3,0	1/1:4,0:3:2.95:50,3,0	1/1:6,0:6:2.12:22,2,0	0/0:12,0:7:3:0,3,411	1/1:4,0:2:3:26,3,0	0/1:16,0:12:13.12:13,0,55	0/1:7,0:5:42.06:42,0,70	0/1:17,0:13:25.75:26,0,273	0/0:16,0:15:3.01:0,3,49	0/0:10,0:7:4.29:0,4,71	./.	./.	./.	1/1:5,2:7:0.99:32,1,0	1/1:4,0:3:6.91:144,7,0	0/0:13,0:11:5.51:0,6,64	0/1:5,0:2:11.37:11,0,84
chr10	31725534	.	GTGTGTGAA	G	1003.65	PASS	AB=1.000;AC=19;AF=0.500;AN=38;BaseQRankSum=-2.347;DP=209;FS=4.496;HRun=0;HaplotypeScore=48.1311;InbreedingCoeff=0.1735;MQ=31.50;MQ0=46;MQRankSum=-1.043;QD=10.56;ReadPosRankSum=0.913;VQSLOD=0.9650;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/1:5,0:4:9.96:10,0,55	./.	./.	./.	0/1:10,0:8:27.37:27,0,43	0/0:16,0:12:10.39:0,10,123	0/1:13,0:9:1.34:94,0,1	./.	1/1:4,0:4:11.33:113,11,0	0/0:5,0:5:1.41:0,1,2	1/1:6,0:4:3.01:65,3,0	0/0:3,0:2:0:0,0,1	0/0:5,0:5:0.47:0,0,1	0/0:12,0:7:3:0,3,191	0/0:3,0:1:0:0,0,0	0/0:14,0:10:4.25:0,4,18	0/1:6,0:4:12.38:15,0,12	1/1:14,0:12:34.64:561,35,0	./.	1/1:10,0:6:8.82:116,9,0	./.	./.	./.	1/1:7,0:7:2.47:33,2,0	1/1:4,0:3:4.37:69,4,0	1/1:3,8:9:0.47:1,0,0	0/1:5,0:2:6.69:12,0,7
chr10	31725536	.	GTGTGAA	G	1138.93	PASS	AB=1.000;AC=21;AF=0.553;AN=38;BaseQRankSum=-2.851;DP=203;FS=1.368;HRun=0;HaplotypeScore=44.2612;InbreedingCoeff=0.2485;MQ=31.66;MQ0=45;MQRankSum=-1.352;QD=12.38;ReadPosRankSum=1.215;VQSLOD=1.9232;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	0/1:5,0:4:10.26:10,0,20	./.	./.	./.	0/1:10,0:8:18.74:27,0,19	0/0:15,0:11:6.91:0,7,61	1/1:11,0:8:23.73:158,24,0	./.	1/1:4,0:4:11.33:98,11,0	0/0:5,0:5:0:0,0,1	1/1:6,0:4:3.01:48,3,0	0/0:3,0:2:0:0,0,1	0/0:5,0:5:0:0,0,1	0/0:12,0:7:2.93:0,3,118	0/0:3,0:1:0:0,0,0	0/0:14,0:10:4.25:0,4,17	0/1:6,0:4:14.95:15,0,29	1/1:2,12:12:36.06:639,36,0	./.	1/1:9,0:6:9.03:139,9,0	./.	./.	./.	1/1:7,0:7:1.69:34,2,0	1/1:4,0:3:3.90:52,4,0	1/1:11,0:9:0.47:1,0,0	1/1:5,0:2:5.77:31,6,0
chr10	31725539	.	TGAAAGA	T	701.78	PASS	AB=1.000;AC=27;AF=0.750;AN=36;BaseQRankSum=-0.488;DP=199;FS=2.541;HRun=0;HaplotypeScore=44.5251;InbreedingCoeff=0.2200;MQ=31.49;MQ0=45;MQRankSum=-0.342;QD=6.00;ReadPosRankSum=0.244;VQSLOD=1.2145;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	1/1:5,0:4:8.73:53,9,0	./.	./.	./.	1/1:8,0:7:3.01:60,3,0	1/1:14,0:11:4.17:23,4,0	1/1:12,0:9:23.73:159,24,0	./.	0/1:4,0:4:29.27:29,0,36	./.	1/1:6,0:4:2.94:18,3,0	0/0:3,0:2:0:0,0,1	0/0:5,0:5:0:0,0,1	1/1:11,0:6:5.69:30,6,0	0/0:4,0:1:0.47:0,0,1	0/0:12,0:8:2.84:0,3,14	1/1:5,0:3:2.98:21,3,0	1/1:14,0:12:34.45:292,34,0	./.	1/1:9,0:6:5.93:40,6,0	./.	./.	./.	1/1:6,0:7:3:27,3,0	1/1:4,0:3:3.45:23,3,0	1/1:11,0:9:0.47:1,0,0	1/1:5,0:2:3.40:19,3,0
chr10	31726581	.	T	TAAAAAA	6378.96	PASS	AB=1.000;AC=45;AF=0.804;AN=56;BaseQRankSum=-1.798;DP=482;FS=0.536;HRun=15;HaplotypeScore=122.4292;InbreedingCoeff=0.5708;MQ=69.86;MQ0=3;MQRankSum=-6.134;QD=17.29;ReadPosRankSum=-4.980;VQSLOD=0.4244;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:13:29.39:360,29,0	1/1:2,0:10:10.53:129,11,0	0/0:33,0:14:14.80:0,15,123	0/1:22,0:11:6.15:32,0,6	1/1:7,0:23:37.21:393,37,0	1/1:8,0:21:23.99:274,24,0	1/1:5,0:15:9.01:130,9,0	0/1:12,0:22:25.09:25,0,196	1/1:6,0:16:15.03:229,15,0	1/1:21,0:20:44.83:593,45,0	1/1:12,0:12:11.94:202,12,0	1/1:6,9:17:15.48:323,15,0	1/1:5,9:15:9.01:188,9,0	1/1:8,0:8:14.91:177,15,0	1/1:11,0:10:13.55:81,14,0	1/1:2,0:5:7.79:87,8,0	1/1:11,10:24:21.02:491,21,0	1/1:5,14:19:11.08:252,11,0	0/0:17,0:22:12.11:0,12,260	0/0:21,0:39:16.56:0,17,817	0/1:3,0:8:21.89:22,0,205	1/1:7,0:7:12.02:207,12,0	1/1:3,0:12:13.34:215,13,0	1/1:4,0:8:6.02:132,6,0	1/1:20,0:20:46.36:651,46,0	1/1:32,0:30:74.86:1033,75,0	0/0:6,0:19:29.74:0,30,371	1/1:7,0:7:11.96:155,12,0
chr10	31726598	.	A	AC	84.73	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.235;DP=455;FS=0.000;HRun=1;HaplotypeScore=70.6004;InbreedingCoeff=0.4556;MQ=78.40;MQ0=3;MQRankSum=-0.465;QD=7.70;ReadPosRankSum=0.853;VQSLOD=0.5839;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:30.30:0,30,306	0/0:8,0:8:16.60:0,17,184	0/0:34,0:17:40.89:0,41,399	0/0:25,0:15:31.31:0,31,232	0/0:20,0:19:45.90:0,46,523	0/0:20,0:20:32.86:0,33,341	0/0:15,0:15:15.05:0,15,198	0/0:29,0:29:86.64:0,87,1049	0/0:15,0:15:26.86:0,27,329	0/0:20,0:19:50.77:0,51,498	0/0:14,0:14:18.02:0,18,224	0/0:10,0:10:23.88:0,24,268	0/0:11,0:11:17.96:0,18,195	0/0:8,0:8:19.94:0,20,182	1/1:4,7:10:0.67:160,1,0	0/0:4,0:4:5.94:0,6,41	0/0:22,0:22:32.14:0,32,445	0/0:14,0:14:17.49:0,17,188	0/0:16,0:16:48:0,48,569	0/0:38,0:38:99:0,112,1454	0/0:9,0:9:27.06:0,27,346	0/0:6,0:6:18:0,18,198	0/0:9,0:9:8.81:0,9,105	0/0:5,0:5:6.02:0,6,80	0/0:23,0:23:59.70:0,60,586	0/0:29,0:27:77.64:0,78,694	0/0:19,0:19:45.15:0,45,611	0/0:4,0:4:11.96:0,12,106
chr10	31726946	.	C	CTCTG	14093.56	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-8.623;DP=809;FS=18.214;HRun=0;HaplotypeScore=145.6672;InbreedingCoeff=0.9561;MQ=63.10;MQ0=7;MQRankSum=2.721;QD=33.80;ReadPosRankSum=3.136;VQSLOD=3.8073;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,33:47:54.19:1331,54,0	0/0:8,0:7:12.04:0,12,199	0/0:24,0:19:23.91:0,24,295	0/0:39,0:27:41.20:0,41,541	0/0:31,0:31:63.21:0,63,1015	0/0:29,0:28:66.23:0,66,1068	0/0:33,0:32:71.74:0,72,1136	0/0:30,0:30:66.19:0,66,960	0/0:31,0:31:75.26:0,75,1226	1/1:10,19:32:64.71:1256,65,0	1/1:4,11:16:15.05:370,15,0	1/1:9,10:19:18.06:438,18,0	1/1:4,25:31:54.19:1330,54,0	1/1:9,24:33:45.15:1109,45,0	0/0:40,0:39:93.28:0,93,1470	1/1:5,21:27:45.15:1098,45,0	1/1:8,28:38:45.18:1319,45,0	1/1:2,19:21:30.10:739,30,0	0/0:23,0:22:46.93:0,47,667	0/0:33,0:33:75.24:0,75,1203	0/0:43,0:44:81.26:0,81,1303	1/1:3,19:24:21.07:476,21,0	1/1:5,21:29:17.19:937,17,0	1/1:10,25:37:0.55:993,1,0	1/1:1,14:16:21.07:518,21,0	1/1:8,22:33:72.09:1367,72,0	0/0:27,0:27:69.19:0,69,1062	1/1:0,14:14:33.11:813,33,0
chr10	31727687	.	TG	T	1494.45	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-5.054;DP=410;FS=17.594;HRun=10;HaplotypeScore=78.2278;InbreedingCoeff=0.6704;MQ=67.20;MQ0=0;MQRankSum=0.034;QD=16.61;ReadPosRankSum=7.858;VQSLOD=2.3903;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:7:8.73:0,9,50	1/1:0,6:6:15:130,15,0	0/0:20,0:20:8.90:0,9,263	0/0:14,0:13:20.99:0,21,182	1/1:6,20:25:56.94:489,57,0	1/1:4,11:15:29.99:260,30,0	1/1:5,22:27:29.79:488,30,0	0/0:15,0:14:5.73:0,6,46	1/1:4,11:16:35.02:292,35,0	0/0:10,0:10:11.80:0,12,91	0/0:14,0:14:10.25:0,10,54	0/0:8,0:8:6.43:0,6,46	0/0:26,0:26:36.10:0,36,226	0/0:14,0:14:12.20:0,12,79	0/0:18,0:18:39.09:0,39,416	0/0:7,0:16:9.21:0,9,50	0/0:12,0:26:7:0,7,32	0/0:8,0:8:10.08:0,10,41	0/0:7,0:9:11.81:0,12,76	0/0:18,0:26:18.01:0,18,111	0/0:7,0:13:2.88:0,3,15	0/0:12,0:12:3.38:0,3,18	0/0:3,0:5:2.84:0,3,14	0/0:8,0:12:2.88:0,3,15	0/0:13,0:14:17.48:0,17,116	0/0:6,0:6:2.80:0,3,13	0/0:10,0:19:8.56:0,9,43	0/0:4,0:4:2.04:0,2,6
chr10	31728186	.	G	GA	697.73	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-3.679;DP=537;FS=2.899;HRun=6;HaplotypeScore=79.5995;InbreedingCoeff=0.9919;MQ=73.11;MQ0=0;MQRankSum=-2.077;QD=33.23;ReadPosRankSum=0.138;VQSLOD=3.6917;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:30:90.20:0,90,918	0/0:8,0:8:21.05:0,21,214	0/0:26,0:26:66.14:0,66,670	0/0:21,0:21:45.08:0,45,450	0/0:24,0:24:72.16:0,72,735	0/0:17,0:17:48.11:0,48,490	0/0:18,0:18:51.09:0,51,512	0/0:24,0:24:57.11:0,57,575	0/0:14,0:14:36.08:0,36,367	0/0:31,0:31:84.19:0,84,857	0/0:16,0:16:45.08:0,45,451	0/0:20,0:20:54.12:0,54,551	0/0:24,0:24:69.15:0,69,704	0/0:13,0:13:33.07:0,33,337	1/1:0,21:21:63.20:793,63,0	0/0:12,0:12:33.08:0,33,337	0/0:19,0:19:52.67:0,53,524	0/0:23,0:23:66.08:0,66,654	0/0:16,0:15:45.10:0,45,458	0/0:32,0:32:90.20:0,90,918	0/0:11,0:11:33.08:0,33,337	0/0:15,0:15:42.10:0,42,429	0/0:23,0:23:63.14:0,63,643	0/0:9,0:9:27.06:0,27,275	0/0:16,0:16:41.45:0,41,428	0/0:23,0:23:66.15:0,66,674	0/0:21,0:21:57.13:0,57,581	0/0:9,0:9:24.05:0,24,245
chr10	31730040	.	C	CTCAT	17595.32	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-0.393;DP=541;FS=20.561;HRun=0;HaplotypeScore=103.7367;InbreedingCoeff=0.6984;MQ=65.70;MQ0=0;MQRankSum=-3.707;QD=34.84;ReadPosRankSum=1.931;VQSLOD=2.9271;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,0:18:18.06:315,18,0	1/1:2,2:4:6.02:146,6,0	0/0:22,0:20:18.02:0,18,229	0/0:14,0:12:6.02:0,6,89	1/1:8,19:29:57.04:1179,57,0	1/1:7,17:24:51.18:1239,51,0	1/1:6,4:11:3.01:73,3,0	1/1:17,13:30:39:651,39,0	1/1:1,18:20:48.16:1171,48,0	1/1:10,0:27:41.58:674,42,0	1/1:11,0:23:45.11:697,45,0	1/1:7,0:15:21.07:363,21,0	1/1:2,0:17:26.79:471,27,0	1/1:3,0:10:24.08:420,24,0	1/1:3,24:27:60.21:1464,60,0	1/1:5,0:16:27.09:472,27,0	1/1:9,0:18:17.09:269,17,0	1/1:5,0:5:2.98:21,3,0	1/1:5,7:12:24.07:538,24,0	1/1:6,23:29:69.12:1525,69,0	1/1:4,9:14:24.08:585,24,0	1/1:5,1:14:27.09:493,27,0	1/1:8,0:27:57.20:997,57,0	1/1:2,0:4:6.02:105,6,0	1/1:4,0:31:60.21:1048,60,0	1/1:8,0:30:75.16:1208,75,0	1/1:11,20:33:48.16:1153,48,0	1/1:13,0:17:18.06:318,18,0
chr10	31730717	.	CT	C	4273.02	PASS	AB=1.000;AC=31;AF=0.554;AN=56;BaseQRankSum=-12.974;DP=529;FS=0.838;HRun=12;HaplotypeScore=75.0507;InbreedingCoeff=0.9273;MQ=71.79;MQ0=1;MQRankSum=0.043;QD=14.48;ReadPosRankSum=5.414;VQSLOD=5.4204;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,16:20:19.34:239,19,0	0/0:3,0:10:14.84:0,15,88	0/0:14,0:12:9:0,9,80	0/1:11,0:10:1.76:2,0,21	0/0:5,0:30:62.86:0,63,340	0/0:5,0:18:25.24:0,25,128	0/0:3,0:11:19.89:0,20,100	0/0:5,0:22:36.55:0,37,223	0/0:4,0:16:31.56:0,32,179	1/1:3,21:24:53.67:410,54,0	1/1:2,29:33:69.66:512,70,0	1/1:8,10:19:23.88:186,24,0	1/1:1,14:15:41.79:321,42,0	1/1:4,12:17:28.93:215,29,0	0/0:7,0:19:31.50:0,31,166	1/1:6,12:18:29.84:232,30,0	1/1:7,25:32:56.76:441,57,0	1/1:1,15:15:41.84:325,42,0	0/0:11,0:23:49.19:0,49,292	0/0:7,0:29:49.22:0,49,281	0/0:1,0:6:6.15:0,6,29	1/1:2,10:12:26.15:208,26,0	1/1:7,13:21:34.71:261,35,0	1/1:2,10:12:26.87:209,27,0	1/1:3,11:14:26.88:209,27,0	1/1:6,17:23:49.56:389,50,0	0/0:9,0:35:68.38:0,68,352	1/1:3,5:7:14.94:116,15,0
chr10	31731503	.	T	TACAC	5165.96	PASS	AB=0.751;AC=27;AF=0.500;AN=54;BaseQRankSum=0.348;DP=431;FS=9.493;HRun=0;HaplotypeScore=104.3082;InbreedingCoeff=0.5569;MQ=59.25;MQ0=5;MQRankSum=0.042;QD=21.44;ReadPosRankSum=-0.463;VQSLOD=3.9841;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:37:74.14:170,0,74	0/0:10,0:10:24.08:0,24,374	0/0:15,0:10:2.89:0,3,19	0/1:21,0:12:5.98:6,0,42	0/0:13,0:14:24.07:0,24,365	0/0:21,0:21:32.44:0,32,442	0/0:10,0:10:27.09:0,27,427	0/0:12,0:29:29.40:0,29,260	0/0:11,0:13:24.07:0,24,365	1/1:12,5:18:30.05:569,30,0	1/1:9,4:17:8.82:215,9,0	1/1:3,2:6:6.02:144,6,0	1/1:6,3:11:12.02:238,12,0	1/1:6,3:14:14.99:263,15,0	0/0:10,0:23:36.04:0,36,334	1/1:1,8:10:21.07:502,21,0	1/1:9,0:17:20.03:191,20,0	1/1:7,9:17:39.13:867,39,0	0/0:5,0:15:19.54:0,20,193	0/0:4,0:9:12.01:0,12,112	./.	1/1:8,3:11:0.69:205,1,0	1/1:5,5:12:15.02:243,15,0	0/1:9,3:12:58.13:132,0,58	0/1:2,4:7:15.27:203,0,15	1/1:10,9:19:36.08:786,36,0	0/0:6,0:21:30.51:0,31,280	0/1:4,7:12:8.29:433,0,8
chr10	31731737	.	ACAC	A	1038.10	PASS	AB=0.938;AC=38;AF=0.792;AN=48;BaseQRankSum=-1.424;DP=328;FS=1.831;HRun=0;HaplotypeScore=48.4704;InbreedingCoeff=0.2882;MQ=55.00;MQ0=39;MQRankSum=1.246;QD=4.99;ReadPosRankSum=1.958;VQSLOD=1.0895;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:7,4:11:3.01:40,3,0	1/1:4,0:4:2.68:25,3,0	./.	0/1:49,0:14:0:0,0,0	1/1:6,0:7:2.70:39,3,0	1/1:3,3:6:6.02:79,6,0	1/1:9,0:9:3:25,3,0	0/0:15,0:13:5.90:0,6,37	1/1:7,0:7:3:28,3,0	1/1:6,0:6:2.86:15,3,0	0/0:5,0:5:0:0,0,0	1/1:9,0:9:9.01:96,9,0	1/1:2,3:5:3.01:40,3,0	1/1:8,1:8:6.02:79,6,0	0/0:10,0:10:8.90:0,9,63	1/1:4,0:4:3.01:36,3,0	1/1:12,2:14:17.59:188,18,0	1/1:8,2:9:3.01:40,3,0	0/0:8,0:8:3.01:0,3,36	./.	./.	1/1:6,0:6:3.01:34,3,0	0/1:6,1:7:0.04:70,0,0	1/1:15,8:23:12.04:159,12,0	1/1:6,5:11:3.01:40,3,0	1/1:5,0:5:6.02:79,6,0	./.	1/1:1,2:3:3.01:40,3,0
chr10	31731741	.	CA	C	36.46	PASS	AC=2;AF=0.037;AN=54;BaseQRankSum=2.496;DP=291;FS=1.355;HRun=1;HaplotypeScore=41.3496;InbreedingCoeff=0.3412;MQ=54.55;MQ0=40;MQRankSum=-2.619;QD=4.56;ReadPosRankSum=-2.687;VQSLOD=-0.5623;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:19.59:0,20,223	0/0:4,0:4:8.33:0,8,102	0/0:48,0:7:21.01:0,21,225	0/0:51,0:13:26.81:0,27,326	0/0:7,0:7:10.57:0,11,104	0/0:5,0:4:6.12:0,6,51	0/0:10,0:10:21:0,21,256	1/1:5,3:8:16.70:124,17,0	0/0:7,0:7:2.70:0,3,16	0/0:6,0:5:11.83:0,12,144	0/0:4,0:4:9.02:0,9,110	0/0:12,0:11:4.11:0,4,179	0/0:5,0:5:7.57:0,8,84	0/0:6,0:5:9.13:0,9,92	0/0:11,0:10:30.03:0,30,410	0/0:5,0:4:0.56:0,1,95	0/0:12,0:12:22.95:0,23,195	0/0:10,0:9:12.41:0,12,189	0/0:5,0:5:7.78:0,8,65	0/0:2,0:2:0.47:0,0,1	0/0:12,1:8:2.90:0,3,12	0/0:5,0:5:1.36:0,1,105	0/0:6,0:6:15.41:0,15,166	0/0:20,0:20:38.44:0,38,482	0/0:10,0:10:13.59:0,14,174	0/0:2,0:2:3.11:0,3,9	./.	0/0:4,0:4:4.56:0,5,47
chr10	31731776	.	CCACCAACATCAACAA	C	1864.82	PASS	AB=1.000;AC=21;AF=0.389;AN=54;BaseQRankSum=3.214;DP=319;FS=17.652;HRun=0;HaplotypeScore=100.8151;InbreedingCoeff=0.3120;MQ=53.57;MQ0=24;MQRankSum=-2.514;QD=15.04;ReadPosRankSum=-0.650;VQSLOD=0.7903;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:39.13:0,39,1463	1/1:4,0:4:5.51:107,6,0	0/0:34,0:12:36.10:0,36,933	0/0:28,0:11:33.10:0,33,1041	1/1:3,8:11:4.06:104,4,0	1/1:7,0:7:12:242,12,0	1/1:9,0:9:11.98:263,12,0	0/1:12,0:11:12.92:342,0,13	1/1:1,10:11:6.02:202,6,0	0/0:9,0:7:5.09:0,5,668	0/0:9,0:9:24.55:0,25,814	0/0:13,0:12:9.25:0,9,1123	0/0:8,0:8:17.68:0,18,762	0/1:9,0:7:18.35:18,0,780	0/1:10,0:9:59.04:171,0,59	0/0:9,0:8:24.08:0,24,879	0/1:13,0:13:32.97:33,0,1039	0/0:9,0:8:18.06:0,18,755	0/1:10,0:8:26.81:134,0,27	./.	1/1:11,0:8:4.22:180,4,0	0/1:4,0:4:21.58:22,0,309	0/1:9,0:9:20.15:20,0,363	0/0:19,0:19:5.44:0,5,1606	0/0:17,0:17:31.35:0,31,1039	0/0:13,0:13:36.12:0,36,1391	1/1:4,0:3:9.03:205,9,0	0/0:8,0:8:21.07:0,21,660
chr10	31731779	.	CCAACATCAACAA	C	1751.97	PASS	AC=20;AF=0.370;AN=54;BaseQRankSum=3.499;DP=342;FS=22.251;HRun=0;HaplotypeScore=96.8116;InbreedingCoeff=0.8274;MQ=56.62;MQ0=23;MQRankSum=-4.210;QD=20.14;ReadPosRankSum=1.191;VQSLOD=0.7888;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:51.17:0,51,1758	1/1:3,0:3:3.01:82,3,0	0/0:36,0:14:42.12:0,42,1115	0/0:32,0:14:42.13:0,42,1422	1/1:11,0:11:1.05:64,1,0	1/1:7,0:7:6.02:163,6,0	1/1:9,0:9:9.03:239,9,0	1/1:4,7:10:18.04:366,18,0	1/1:11,0:11:5.85:162,6,0	0/0:10,0:8:21.07:0,21,767	0/0:9,0:9:24.55:0,25,814	0/0:16,0:15:42.14:0,42,1483	0/0:11,0:11:27.03:0,27,993	0/0:11,0:9:24.08:0,24,927	1/1:11,0:10:15.01:309,15,0	0/0:10,0:9:27.09:0,27,954	0/0:15,0:15:33.11:0,33,1254	0/0:8,0:8:18.03:0,18,657	1/1:10,0:8:6.02:143,6,0	./.	1/1:10,0:7:4.23:180,4,0	0/0:4,0:4:9.03:0,9,321	0/0:11,0:11:19.31:0,19,624	0/0:19,0:19:42.14:0,42,1605	0/0:17,0:17:31.35:0,31,1014	0/0:15,0:15:42.14:0,42,1564	1/1:4,0:3:9.03:230,9,0	0/0:9,0:9:24.08:0,24,779
chr10	31732557	.	GC	G	15231.20	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=12.894;DP=724;FS=9.135;HRun=1;HaplotypeScore=75.6985;InbreedingCoeff=0.9856;MQ=81.26;MQ0=2;MQRankSum=0.282;QD=38.08;ReadPosRankSum=7.110;VQSLOD=4.3871;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,58:58:99:2304,166,0	0/0:14,0:14:39.12:0,39,593	0/0:24,0:24:72.18:0,72,1047	0/0:20,0:20:51.15:0,51,743	0/0:21,0:20:57.19:0,57,902	0/0:22,0:22:66.23:0,66,1054	0/0:14,0:14:42.13:0,42,640	0/0:25,0:25:72.25:0,72,1143	0/0:25,0:25:75.26:0,75,1183	1/1:0,26:26:78.25:1066,78,0	1/1:0,17:17:48.16:667,48,0	1/1:1,21:22:60.19:824,60,0	1/1:0,27:26:66.22:916,66,0	1/1:0,26:26:78.26:1089,78,0	0/0:27,0:27:78.16:0,78,1160	1/1:0,37:36:99:1378,99,0	1/1:0,25:25:60.20:835,60,0	1/1:0,16:16:48.16:670,48,0	0/0:32,0:31:93.26:0,93,1399	0/0:16,0:16:48.16:0,48,760	0/0:53,0:53:99:0,156,2328	1/1:0,26:26:63.21:875,63,0	1/1:0,12:12:33.11:460,33,0	1/1:0,45:45:99:1716,123,0	1/1:0,28:28:81.27:1131,81,0	1/1:0,29:29:87.29:1217,87,0	0/0:31,0:31:93.32:0,93,1464	1/1:0,5:5:6.02:84,6,0
chr10	31732700	.	G	GA	6668.72	PASS	AB=0.600;AC=21;AF=0.404;AN=52;BaseQRankSum=-9.744;DP=713;FS=5.797;HRun=2;HaplotypeScore=79.0356;InbreedingCoeff=0.8956;MQ=43.32;MQ0=70;MQRankSum=-0.982;QD=25.36;ReadPosRankSum=-2.244;VQSLOD=3.8130;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:41:60.18:0,60,764	0/1:3,6:9:17.80:248,0,18	./.	./.	1/1:2,14:16:36.08:514,36,0	1/1:0,17:14:33.11:494,33,0	1/1:1,22:19:33.11:485,33,0	1/1:1,19:14:36.12:537,36,0	1/1:1,24:24:48.12:693,48,0	0/0:35,0:35:96.30:0,96,1232	0/0:9,0:9:18.06:0,18,233	0/0:37,0:37:63.20:0,63,818	0/0:33,0:32:60.14:0,60,778	0/0:32,0:32:54.04:0,54,682	1/1:1,28:26:54.18:801,54,0	0/0:31,0:31:66.02:0,66,852	0/0:30,0:28:42.14:0,42,542	0/0:17,0:12:9.03:0,9,117	1/1:3,30:26:75.25:1117,75,0	1/1:1,13:14:33.07:456,33,0	1/1:5,35:29:30.06:425,30,0	0/0:21,0:20:36.12:0,36,467	0/0:16,0:15:33.09:0,33,414	0/0:40,0:32:42.14:0,42,545	0/0:17,0:17:44.65:0,45,579	0/0:35,0:35:99:0,105,1361	1/1:3,33:32:60.20:898,60,0	0/0:4,0:4:6.02:0,6,78
chr10	31733149	.	GACACACACACACACAC	G	8928.42	PASS	AB=0.636;AC=27;AF=0.500;AN=54;BaseQRankSum=6.897;DP=594;FS=14.896;HRun=0;HaplotypeScore=220.8772;InbreedingCoeff=0.7937;MQ=50.99;MQ0=30;MQRankSum=-6.800;QD=39.51;ReadPosRankSum=3.984;VQSLOD=2.8656;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,17:17:6.02:270,6,0	0/0:7,0:6:3.01:0,3,135	0/0:52,0:27:48.64:0,49,2612	0/0:50,0:27:48.13:0,48,2473	0/0:20,0:18:12.49:0,12,704	0/0:18,0:17:9.03:0,9,572	0/0:32,0:29:36.04:0,36,1192	0/0:18,0:23:33.11:0,33,1849	0/0:19,0:17:21.04:0,21,824	1/1:4,14:16:26.75:797,27,0	1/1:6,6:11:5.98:155,6,0	1/1:2,13:13:18.06:811,18,0	1/1:1,12:11:15.52:677,16,0	1/1:4,17:14:30.10:1353,30,0	0/0:8,0:21:9.03:0,9,433	1/1:0,12:9:24.08:1082,24,0	1/1:3,12:13:8.94:175,9,0	0/1:3,4:7:63.38:353,0,63	0/0:15,0:22:55.09:0,55,3552	0/0:5,0:19:30.18:0,30,1500	0/0:19,0:40:54.14:0,54,2914	1/1:7,17:20:33.11:1488,33,0	1/1:9,7:15:6.02:271,6,0	./.	1/1:2,12:10:6.02:270,6,0	1/1:7,18:23:44.93:955,45,0	0/0:10,0:26:45.13:0,45,2618	1/1:5,4:9:6.02:270,6,0
chr10	31733629	.	A	AACAC	10116.99	PASS	AB=0.743;AC=47;AF=0.870;AN=54;BaseQRankSum=-1.105;DP=705;FS=5.645;HRun=0;HaplotypeScore=139.8466;InbreedingCoeff=0.0532;MQ=50.47;MQ0=16;MQRankSum=-0.700;QD=15.76;ReadPosRankSum=-0.544;VQSLOD=4.0793;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:27,3:31:29.84:579,30,0	1/1:4,0:7:8.97:78,9,0	./.	0/0:38,0:12:3.01:0,3,47	1/1:32,0:27:17.07:178,17,0	1/1:14,0:24:5.95:70,6,0	0/1:31,0:25:8.05:60,0,8	1/1:28,0:26:23.92:274,24,0	1/1:18,0:26:13.57:97,14,0	1/1:12,6:19:17.78:286,18,0	1/1:9,11:21:23.92:513,24,0	1/1:10,8:23:26.03:407,26,0	1/1:10,4:14:18.04:382,18,0	1/1:12,9:22:20.86:480,21,0	1/1:28,0:27:47.56:761,48,0	1/1:3,14:21:23.27:395,23,0	0/1:24,14:40:23.86:1190,0,24	0/1:10,5:16:15.46:490,0,15	1/1:20,0:15:17.80:284,18,0	1/1:19,1:34:25.06:285,25,0	1/1:18,0:23:3.01:40,3,0	0/1:15,11:28:18.47:495,0,18	1/1:5,15:24:29.25:597,29,0	0/1:12,22:35:50.10:886,0,50	1/1:11,9:25:26.03:464,26,0	1/1:10,1:15:20.70:327,21,0	1/1:13,0:21:13.67:175,14,0	1/1:6,6:15:20.27:323,20,0
chr10	31733663	.	A	ACAC	411.73	PASS	AB=0.842;AC=2;AF=0.036;AN=56;BaseQRankSum=3.950;DP=614;FS=30.842;HRun=0;HaplotypeScore=150.8793;InbreedingCoeff=0.0060;MQ=62.78;MQ0=9;MQRankSum=-0.927;QD=8.58;ReadPosRankSum=0.492;VQSLOD=1.7008;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:37.20:0,37,386	0/0:8,0:8:23.91:0,24,247	0/0:23,0:13:36.11:0,36,596	0/0:24,0:15:45.05:0,45,791	0/0:33,0:27:57.04:0,57,797	0/0:15,0:14:20.34:0,20,199	0/1:21,0:17:6.24:6,0,289	0/0:27,0:26:30.03:0,30,1023	0/0:17,0:17:43.58:0,44,599	0/0:20,0:20:50.65:0,51,782	0/0:18,1:19:31.25:0,31,407	0/0:25,0:23:41.21:0,41,507	0/0:14,0:14:23.06:0,23,418	0/0:15,0:14:17.53:0,18,247	0/1:14,7:25:13.96:486,0,14	0/0:25,0:25:49.12:0,49,607	0/0:38,0:38:35.25:0,35,738	0/0:25,0:24:43.27:0,43,532	0/0:17,0:15:37.55:0,38,618	0/0:30,0:29:78.44:0,78,1021	0/0:12,0:10:18.02:0,18,273	0/0:32,0:31:70.71:0,71,801	0/0:20,0:20:20.52:0,21,361	0/0:29,0:27:33.31:0,33,400	0/0:22,0:22:45.71:0,46,589	0/0:20,0:20:23.62:0,24,593	0/0:18,0:12:20.57:0,21,334	0/0:15,0:15:31.40:0,31,330
chr10	31733792	.	A	AGAAG	12506.55	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-12.791;DP=615;FS=7.597;HRun=0;HaplotypeScore=79.5281;InbreedingCoeff=0.9595;MQ=58.66;MQ0=7;MQRankSum=0.055;QD=37.90;ReadPosRankSum=7.415;VQSLOD=3.7508;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,21:24:33.11:829,33,0	0/0:8,0:8:21.06:0,21,335	0/0:21,0:7:9.03:0,9,121	0/0:21,0:9:8.76:0,9,153	0/0:28,0:28:78.24:0,78,1267	0/0:24,0:24:60.09:0,60,936	0/0:18,0:17:35.53:0,36,421	0/0:28,0:27:57.17:0,57,869	0/0:25,0:25:65.69:0,66,993	1/1:6,17:25:60.16:1259,60,0	1/1:5,13:18:27.09:679,27,0	1/1:6,6:12:9.03:225,9,0	1/1:0,16:16:30.10:754,30,0	1/1:3,15:19:30.10:737,30,0	0/0:25,0:25:57.14:0,57,938	1/1:3,18:23:39.13:958,39,0	1/1:10,26:36:45.15:1110,45,0	1/1:6,12:20:30.10:754,30,0	0/0:21,0:17:39.11:0,39,608	0/0:21,0:21:51.17:0,51,871	0/0:12,0:12:20.88:0,21,377	1/1:3,22:27:54.14:1258,54,0	1/1:2,28:32:47.90:1187,48,0	1/1:3,21:25:30.10:727,30,0	1/1:3,15:18:27.09:666,27,0	1/1:4,16:21:54.12:1213,54,0	0/0:31,0:31:75.23:0,75,1216	1/1:5,7:13:6.02:151,6,0
chr10	31734428	.	TA	T	6289.83	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-3.260;DP=539;FS=0.350;HRun=10;HaplotypeScore=94.3578;InbreedingCoeff=0.9864;MQ=71.33;MQ0=1;MQRankSum=-3.478;QD=22.30;ReadPosRankSum=2.934;VQSLOD=5.1092;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,19:20:54.46:469,54,0	0/0:2,0:7:17.04:0,17,85	0/0:13,0:9:7.83:0,8,117	0/0:12,0:10:20.39:0,20,217	0/0:11,0:36:77.49:0,77,444	0/0:3,0:18:42.68:0,43,214	0/0:2,0:15:25.60:0,26,128	0/0:6,0:24:57.45:0,57,330	0/0:2,0:15:34.26:0,34,190	1/1:2,24:25:68.94:591,69,0	1/1:3,22:24:62.98:544,63,0	1/1:1,12:13:29.98:256,30,0	1/1:0,14:14:38.99:338,39,0	1/1:1,12:13:29.99:260,30,0	0/0:3,0:20:39.77:0,40,199	1/1:1,7:8:21.47:184,21,0	1/1:1,26:27:75.45:649,75,0	1/1:0,19:19:50.99:442,51,0	0/0:3,0:27:68.13:0,68,341	0/0:3,0:31:80.03:0,80,428	0/0:6,0:18:22.73:0,23,114	1/1:1,22:23:59.88:509,60,0	1/1:3,16:19:41.94:356,42,0	1/1:1,16:17:47.99:416,48,0	1/1:2,16:18:41.99:364,42,0	1/1:4,23:27:68.98:597,69,0	0/0:1,0:19:28.22:0,28,142	1/1:0,12:12:35.99:312,36,0
chr10	31734613	.	T	TA	7786.51	PASS	AC=20;AF=0.370;AN=54;BaseQRankSum=-19.009;DP=669;FS=1.767;HRun=5;HaplotypeScore=102.2057;InbreedingCoeff=0.9996;MQ=81.60;MQ0=0;MQRankSum=-4.485;QD=32.18;ReadPosRankSum=0.151;VQSLOD=4.5667;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:71,0:71:99:0,198,2066	1/1:0,11:11:33.11:431,33,0	0/0:20,0:20:49.47:0,49,490	0/0:24,0:24:47.29:0,47,534	1/1:2,25:27:75.06:907,75,0	1/1:1,19:20:54.18:705,54,0	1/1:3,25:28:60.20:784,60,0	1/1:2,24:26:72.21:912,72,0	1/1:2,19:21:48.16:627,48,0	0/0:33,0:33:90.20:0,90,942	0/0:18,0:18:51.09:0,51,530	0/0:21,0:21:57.10:0,57,587	0/0:21,0:18:45.11:0,45,482	0/0:14,0:14:36.05:0,36,369	0/0:17,0:17:48.12:0,48,515	0/0:9,0:8:24.06:0,24,258	0/0:26,0:25:69.12:0,69,719	0/0:21,0:21:60.10:0,60,624	1/1:1,33:33:96.23:1167,96,0	1/1:2,19:21:51.12:647,51,0	1/1:2,19:21:51.17:666,51,0	0/0:20,0:20:60.12:0,60,619	0/0:20,0:20:60.15:0,60,643	0/0:37,0:35:99:0,105,1106	0/0:29,0:29:81.20:0,81,869	0/0:26,0:25:62.98:0,63,652	1/1:4,29:33:72.23:940,72,0	./.
chr10	31734984	.	CAGA	C	16151.42	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=19.476;DP=680;FS=15.208;HRun=0;HaplotypeScore=147.5985;InbreedingCoeff=0.9988;MQ=70.10;MQ0=0;MQRankSum=-7.138;QD=45.24;ReadPosRankSum=4.437;VQSLOD=5.4852;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,57:58:99:2676,154,0	0/0:11,0:11:33.10:0,33,704	0/0:13,0:13:36.12:0,36,835	0/0:18,0:18:48.03:0,48,1015	0/0:22,0:22:66.23:0,66,1515	0/0:21,0:21:63.22:0,63,1456	0/0:32,0:32:90.31:0,90,2080	0/0:32,0:32:96.32:0,96,2225	0/0:39,0:39:99:0,114,2658	1/1:2,19:21:57.20:1005,57,0	1/1:0,20:20:42.57:708,43,0	1/1:1,26:27:51.17:900,51,0	1/1:0,18:18:51.17:893,51,0	1/1:0,21:21:60.21:1058,60,0	0/0:32,0:32:93.32:0,93,2183	1/1:0,21:21:60.21:1058,60,0	1/1:2,17:19:48.16:847,48,0	1/1:0,27:27:75.26:1319,75,0	0/0:18,0:18:54.17:0,54,1199	0/0:17,0:17:51.17:0,51,1181	0/0:34,0:34:99:0,102,2386	1/1:1,14:15:42.14:740,42,0	1/1:0,14:14:33.11:582,33,0	1/1:1,33:34:81.28:1429,81,0	1/1:2,26:28:75.26:1320,75,0	1/1:1,26:27:75.26:1299,75,0	0/0:34,0:32:99:0,99,2334	1/1:0,7:6:18.06:318,18,0
chr10	31735326	.	TC	T	8904.70	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-8.895;DP=582;FS=4.443;HRun=4;HaplotypeScore=83.2724;InbreedingCoeff=0.9831;MQ=75.28;MQ0=0;MQRankSum=-4.555;QD=31.58;ReadPosRankSum=2.334;VQSLOD=5.4803;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,43:44:99:1440,120,0	0/0:5,0:5:15.04:0,15,192	0/0:14,0:14:42.09:0,42,511	0/0:24,0:24:62.72:0,63,830	0/0:22,0:22:66.18:0,66,871	0/0:26,0:26:72.19:0,72,939	0/0:29,0:29:84.24:0,84,1110	0/0:22,0:22:60.16:0,60,765	0/0:18,0:18:54.16:0,54,737	1/1:0,17:17:51.16:610,51,0	1/1:0,18:18:44.88:468,45,0	1/1:0,27:27:66.15:792,66,0	1/1:0,15:15:42.13:504,42,0	1/1:0,15:15:39.12:468,39,0	0/0:29,0:29:84.27:0,84,1159	1/1:0,14:14:36.11:432,36,0	1/1:0,23:23:66.20:792,66,0	1/1:0,8:8:24.07:288,24,0	0/0:22,0:22:66.20:0,66,890	0/0:21,0:21:63.21:0,63,881	0/0:39,0:39:99:0,117,1569	1/1:1,17:18:48.06:543,48,0	1/1:2,15:17:39.12:468,39,0	1/1:0,23:23:60.18:720,60,0	1/1:2,18:20:51.16:611,51,0	1/1:1,20:21:60.18:720,60,0	0/0:29,0:29:84.23:0,84,1121	1/1:2,0:2:5.99:49,6,0
chr10	31735766	.	A	AT	2447.95	PASS	AB=0.946;AC=41;AF=0.820;AN=50;BaseQRankSum=-1.327;DP=265;FS=14.907;HRun=2;HaplotypeScore=60.4957;InbreedingCoeff=0.2238;MQ=65.02;MQ0=1;MQRankSum=-0.865;QD=10.33;ReadPosRankSum=1.074;VQSLOD=0.1519;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:6,1:7:1.99:56,0,2	1/1:4,0:4:1.56:4,2,0	0/0:20,0:10:20.11:0,20,170	0/1:9,0:5:6.13:29,0,6	1/1:15,1:16:14.83:128,15,0	1/1:17,0:17:10.27:68,10,0	./.	1/1:33,0:33:40.65:265,41,0	1/1:9,0:9:9.50:60,9,0	1/1:7,2:9:23.98:217,24,0	1/1:1,4:5:12:116,12,0	1/1:1,2:3:9:82,9,0	1/1:1,2:3:6.01:61,6,0	1/1:2,2:4:11.99:113,12,0	1/1:4,0:4:3.74:10,4,0	1/1:2,2:4:12:107,12,0	1/1:13,5:18:21.55:317,22,0	0/1:10,2:12:4.33:110,0,4	0/1:19,0:18:2.59:29,0,3	1/1:8,0:8:1.15:25,1,0	0/0:6,0:6:0.71:0,1,19	./.	1/1:2,1:3:8.49:60,8,0	./.	1/1:5,5:11:23.92:238,24,0	1/1:3,7:10:27.01:265,27,0	0/1:22,0:22:3.25:56,0,3	1/1:3,4:7:7.90:153,8,0
chr10	31735770	.	A	AAAAAAAT	7070.18	PASS	AC=28;AF=0.519;AN=54;BaseQRankSum=4.593;DP=296;FS=4.519;HRun=0;HaplotypeScore=98.6575;InbreedingCoeff=0.8716;MQ=67.32;MQ0=1;MQRankSum=-10.950;QD=57.02;ReadPosRankSum=0.425;VQSLOD=4.5225;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,1:9:20.92:528,21,0	0/0:4,0:4:12.04:0,12,287	0/0:21,0:11:29.59:0,30,330	0/0:9,0:5:7.85:0,8,59	0/0:16,0:16:42.07:0,42,857	0/0:17,0:17:48.16:0,48,1023	0/0:1,0:1:2.99:0,3,23	0/0:36,0:36:78.68:0,79,1612	0/0:9,0:9:24:0,24,492	1/1:11,2:13:26.79:581,27,0	1/1:6,4:10:24.07:720,24,0	1/1:3,2:5:15.05:460,15,0	1/1:3,2:5:12.04:331,12,0	1/1:2,2:4:9.03:293,9,0	0/0:4,0:4:12.04:0,12,287	1/1:3,2:5:11.93:235,12,0	1/1:14,5:19:35.67:757,36,0	1/1:11,2:13:0.97:201,1,0	0/0:21,0:20:60.18:0,60,1236	0/0:7,0:7:18.06:0,18,388	0/0:6,0:6:18.04:0,18,379	1/1:1,0:1:3.01:92,3,0	1/1:4,2:6:15.03:364,15,0	./.	1/1:5,5:11:17.61:728,18,0	1/1:8,7:15:39.10:1153,39,0	0/0:21,0:21:57.20:0,57,1292	1/1:4,4:8:23.66:628,24,0
chr10	31735920	.	TCCCA	T	7573.07	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=11.376;DP=365;FS=21.494;HRun=0;HaplotypeScore=64.1416;InbreedingCoeff=0.9852;MQ=76.39;MQ0=2;MQRankSum=-4.074;QD=42.31;ReadPosRankSum=4.924;VQSLOD=3.3235;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,20:26:58.98:988,59,0	0/0:5,0:5:15.05:0,15,387	0/0:9,0:9:21.07:0,21,499	0/0:11,0:11:20.10:0,20,458	0/0:17,0:17:45.15:0,45,1132	0/0:24,0:23:69.24:0,69,1775	0/0:6,0:6:18.06:0,18,409	0/0:31,0:31:63.22:0,63,1593	0/0:10,0:10:30.10:0,30,761	1/1:1,15:16:45.15:783,45,0	1/1:1,15:15:36.12:641,36,0	1/1:1,6:7:12.04:214,12,0	1/1:0,8:8:24.08:427,24,0	1/1:0,11:11:27.09:480,27,0	0/0:11,0:11:33.11:0,33,850	1/1:0,12:12:33.11:587,33,0	1/1:1,11:12:30.10:529,30,0	1/1:1,5:6:15.05:267,15,0	0/0:21,0:21:60.20:0,60,1462	0/0:13,0:13:33.11:0,33,851	0/0:13,0:13:36.12:0,36,911	1/1:0,8:8:24.08:427,24,0	1/1:0,8:8:18.06:320,18,0	1/1:0,11:11:20.65:373,21,0	1/1:1,6:7:18.06:320,18,0	1/1:2,12:14:33.11:576,33,0	0/0:15,0:15:39.12:0,39,936	1/1:4,12:16:36.12:641,36,0
chr10	31736400	.	AG	A	794.03	PASS	AB=0.741;AC=21;AF=0.477;AN=44;BaseQRankSum=1.578;DP=142;FS=12.537;HRun=7;HaplotypeScore=30.2974;InbreedingCoeff=0.4562;MQ=97.53;MQ0=1;MQRankSum=-2.424;QD=12.41;ReadPosRankSum=2.142;VQSLOD=0.8976;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,7:14:7.36:197,7,0	0/0:1,0:1:3.01:0,3,38	0/0:20,0:14:20.73:0,21,229	0/0:15,0:14:24.01:0,24,266	./.	./.	0/0:4,0:4:9.03:0,9,113	0/0:10,0:10:9.03:0,9,113	./.	1/1:0,1:1:3.01:31,3,0	1/1:2,3:5:9.02:92,9,0	1/1:0,1:1:3.01:31,3,0	0/1:3,0:3:2.72:21,0,3	./.	0/0:5,0:5:6.45:0,6,59	1/1:3,2:5:9.01:90,9,0	./.	0/1:1,1:2:10.59:25,0,11	0/0:2,0:2:6.02:0,6,75	0/0:5,0:5:1.88:0,2,85	0/0:7,0:7:11.99:0,12,120	1/1:3,4:7:7.22:88,7,0	1/1:3,5:8:15.03:153,15,0	1/1:1,3:4:3.01:31,3,0	1/1:6,3:8:9.02:92,9,0	0/1:1,4:5:22.69:100,0,23	0/0:3,0:3:3.01:0,3,38	./.
chr10	31736883	.	GTAA	G	275.02	PASS	AB=0.902;AC=17;AF=0.304;AN=56;BaseQRankSum=3.809;DP=218;FS=13.625;HRun=0;HaplotypeScore=62.5275;InbreedingCoeff=-0.0173;MQ=63.29;MQ0=0;MQRankSum=-6.007;QD=2.29;ReadPosRankSum=3.103;VQSLOD=0.2765;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:8,0:9:19.23:90,19,0	0/0:1,0:1:3.01:0,3,74	0/0:14,0:12:35.40:0,35,785	0/0:8,0:6:17.89:0,18,356	0/0:4,0:4:9.87:0,10,168	0/1:5,2:7:18.02:18,0,286	0/0:14,1:15:23.18:0,23,893	0/1:12,4:16:99:117,0,782	0/0:3,0:3:9.03:0,9,218	0/1:8,1:9:40.39:40,0,133	0/1:7,1:8:8.32:8,0,9	0/1:7,1:8:5.33:5,0,44	0/1:8,1:9:20.21:40,0,20	0/1:7,0:7:5.39:11,0,5	0/0:5,0:5:15.05:0,15,368	0/1:7,1:8:11.97:39,0,12	0/1:6,0:6:2.39:2,0,23	0/0:2,0:2:5.93:0,6,40	0/0:10,0:10:30.08:0,30,634	0/0:7,0:7:20.99:0,21,405	0/0:11,0:11:32.94:0,33,551	0/1:6,1:7:8.33:9,0,8	0/1:12,1:13:8.89:9,0,13	1/1:3,0:3:2.74:12,3,0	0/1:6,0:7:2.70:21,0,3	0/0:11,0:11:31.45:0,31,237	0/0:7,0:7:21.02:0,21,421	0/1:3,0:3:7.39:7,0,18
chr10	31737700	.	TTTACCTGG	T	10674.29	PASS	AB=0.583;AC=29;AF=0.518;AN=56;BaseQRankSum=15.515;DP=711;FS=20.148;HRun=0;HaplotypeScore=187.5774;InbreedingCoeff=0.8829;MQ=89.60;MQ0=0;MQRankSum=-16.398;QD=35.82;ReadPosRankSum=2.788;VQSLOD=2.9084;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,13:18:24.08:677,24,0	0/0:13,0:13:39.13:0,39,1724	0/0:32,0:32:93.32:0,93,3776	0/0:33,0:33:87.29:0,87,3287	0/0:35,0:35:99:0,105,4576	0/0:29,0:29:87.30:0,87,3821	0/0:25,0:25:72.25:0,72,3154	0/0:38,0:38:99:0,111,4571	0/0:43,0:43:99:0,129,5555	1/1:15,17:32:51.18:1428,51,0	1/1:18,14:31:26.89:527,27,0	1/1:7,11:18:21.06:591,21,0	1/1:5,8:13:20.79:528,21,0	1/1:4,6:10:12.04:339,12,0	0/0:33,0:33:99:0,99,4316	0/1:6,15:21:99:818,0,101	1/1:7,14:21:30.06:790,30,0	1/1:2,3:5:9.03:258,9,0	0/0:35,0:35:99:0,99,4180	0/0:28,0:28:81.28:0,81,3511	0/0:41,0:41:99:0,120,5226	1/1:13,23:36:54.08:1381,54,0	1/1:7,17:24:33.10:845,33,0	1/1:5,5:10:2.97:20,3,0	1/1:13,14:27:32.88:939,33,0	1/1:8,17:25:48.13:1276,48,0	0/0:28,0:28:81.28:0,81,3499	1/1:1,4:5:9.03:258,9,0
chr10	31738478	.	TA	T	9385.03	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=15.656;DP=635;FS=2.097;HRun=6;HaplotypeScore=60.1561;InbreedingCoeff=0.9997;MQ=87.86;MQ0=0;MQRankSum=-2.593;QD=28.44;ReadPosRankSum=4.834;VQSLOD=5.3397;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,27:27:72.18:774,72,0	0/0:10,0:10:27.09:0,27,355	0/0:26,0:26:62.81:0,63,883	0/0:20,0:20:47.34:0,47,570	0/0:37,0:37:99:0,105,1364	0/0:18,0:18:51.15:0,51,655	0/0:14,0:14:39.12:0,39,500	0/0:36,0:36:93.29:0,93,1207	0/0:18,0:18:51.17:0,51,671	1/1:2,23:25:69.15:731,69,0	1/1:3,21:24:60.15:644,60,0	1/1:0,21:21:60.15:645,60,0	1/1:1,26:27:72.18:773,72,0	1/1:1,18:19:48.12:516,48,0	0/0:23,0:23:69.22:0,69,906	1/1:1,24:25:69.17:742,69,0	1/1:2,16:18:45.11:484,45,0	1/1:0,13:13:32.79:354,33,0	0/0:27,0:27:75.24:0,75,986	0/0:39,0:39:99:0,111,1458	0/0:15,0:15:45.12:0,45,563	1/1:1,24:25:63.16:677,63,0	1/1:3,30:33:90.22:967,90,0	1/1:1,13:14:39.10:419,39,0	1/1:0,20:20:57.14:613,57,0	1/1:2,23:25:69.14:725,69,0	0/0:22,0:21:60.20:0,60,789	1/1:4,10:14:30.07:322,30,0
chr10	31738984	.	GA	G	13230.65	PASS	AB=0.906;AC=51;AF=0.911;AN=56;BaseQRankSum=1.674;DP=642;FS=5.933;HRun=9;HaplotypeScore=69.2606;InbreedingCoeff=0.7787;MQ=80.67;MQ0=0;MQRankSum=-5.318;QD=22.09;ReadPosRankSum=4.235;VQSLOD=5.7153;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,31:32:84.04:768,84,0	1/1:0,7:7:21.01:192,21,0	0/1:26,3:29:13.28:13,0,566	0/0:12,0:12:13.76:0,14,155	1/1:2,30:32:90.05:824,90,0	1/1:1,17:18:51.03:466,51,0	1/1:3,21:24:57.03:522,57,0	1/1:5,28:33:83.70:762,84,0	1/1:4,15:19:39.02:357,39,0	1/1:3,20:23:63.03:575,63,0	1/1:3,28:31:75.03:686,75,0	1/1:2,20:22:57.03:522,57,0	1/1:1,17:18:42.02:384,42,0	1/1:3,16:19:42.02:384,42,0	0/0:31,0:31:87.25:0,87,995	1/1:4,16:20:48.02:439,48,0	1/1:1,18:19:51.03:467,51,0	1/1:2,18:20:51.02:465,51,0	1/1:8,29:37:87.02:792,87,0	1/1:4,38:42:99:1015,111,0	1/1:1,17:18:45.02:412,45,0	1/1:3,19:22:51.02:467,51,0	1/1:3,15:18:45.02:412,45,0	1/1:2,9:10:21:192,21,0	1/1:2,23:25:66.04:604,66,0	1/1:3,21:24:63.03:576,63,0	1/1:2,20:21:60.03:549,60,0	1/1:0,14:14:42.02:384,42,0
chr10	31739279	.	A	ACT	10216.01	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=20.543;DP=742;FS=2.841;HRun=0;HaplotypeScore=175.3529;InbreedingCoeff=0.9992;MQ=85.30;MQ0=0;MQRankSum=-8.436;QD=39.91;ReadPosRankSum=1.229;VQSLOD=5.4264;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:56:99:0,169,2660	1/1:2,12:14:39.12:569,39,0	0/0:21,0:21:60.16:0,60,919	0/0:36,0:36:99:0,105,1548	1/1:1,25:28:66.22:1040,66,0	1/1:1,29:30:86.81:1399,87,0	1/1:5,17:22:40.22:730,40,0	1/1:2,12:14:19.95:504,20,0	1/1:6,27:34:96.34:1419,96,0	0/0:26,0:26:78.25:0,78,1213	0/0:26,0:26:78.27:0,78,1272	0/0:26,0:26:78.26:0,78,1252	0/0:31,0:31:93.32:0,93,1517	0/0:25,0:25:75.24:0,75,1197	0/0:29,0:29:87.30:0,87,1414	0/0:24,0:24:72.25:0,72,1175	0/0:22,0:22:66.21:0,66,1050	0/0:18,0:18:54.17:0,54,854	1/1:2,13:15:45.14:697,45,0	1/1:5,24:29:32.99:977,33,0	1/1:3,44:47:99:1829,115,0	0/0:27,0:27:75.24:0,75,1179	0/0:25,0:25:75.26:0,75,1224	0/0:24,0:24:72.19:0,72,1124	0/0:28,0:28:84.29:0,84,1371	0/0:28,0:28:81.28:0,81,1321	1/1:1,22:23:69.22:1052,69,0	0/0:14,0:14:42.14:0,42,685
chr10	31739280	.	A	AG	6877.55	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=19.431;DP=750;FS=3.691;HRun=1;HaplotypeScore=174.9071;InbreedingCoeff=1.0000;MQ=84.89;MQ0=0;MQRankSum=-8.430;QD=26.15;ReadPosRankSum=-0.304;VQSLOD=4.5016;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,162,2050	1/1:3,12:15:38.73:365,39,0	0/0:20,0:20:57.14:0,57,698	0/0:36,0:36:99:0,102,1232	1/1:3,25:28:65.94:629,66,0	1/1:3,29:32:89.84:876,90,0	1/1:6,17:23:62.92:541,63,0	1/1:3,12:15:45.03:410,45,0	1/1:6,28:34:98.69:965,99,0	0/0:26,0:26:72.22:0,72,915	0/0:26,0:26:78.23:0,78,986	0/0:26,0:26:78.25:0,78,1012	0/0:31,0:31:93.29:0,93,1194	0/0:25,0:25:72.22:0,72,920	0/0:29,0:29:87.28:0,87,1129	0/0:24,0:24:72.23:0,72,935	0/0:22,0:22:63.20:0,63,814	0/0:18,0:18:54.18:0,54,701	1/1:4,13:17:49.63:497,50,0	1/1:5,24:29:77.83:737,78,0	1/1:4,44:48:99:1187,116,0	0/0:28,0:28:75.17:0,75,925	0/0:26,0:26:75.24:0,75,971	0/0:25,0:25:72.20:0,72,893	0/0:28,0:28:84.22:0,84,1045	0/0:28,0:28:81.25:0,81,1039	1/1:0,22:22:66.12:671,66,0	0/0:14,0:14:42.14:0,42,545
chr10	31740477	.	TGGCCCAGCCTA	T	542.37	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.540;DP=464;FS=9.955;HRun=0;HaplotypeScore=157.9672;InbreedingCoeff=0.8543;MQ=88.58;MQ0=0;MQRankSum=-4.480;QD=54.24;ReadPosRankSum=1.793;VQSLOD=3.0252;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:54.19:0,54,2600	0/0:2,0:2:6.01:0,6,203	0/0:19,0:19:56.98:0,57,2357	0/0:25,0:25:69.22:0,69,3032	0/0:20,0:20:54.14:0,54,2651	0/0:16,0:16:45.15:0,45,2416	0/0:15,0:15:45.15:0,45,2414	0/0:35,0:32:93.31:0,93,4285	0/0:17,0:17:51.18:0,51,2976	0/0:13,0:13:38.87:0,39,1805	0/0:11,0:11:33.11:0,33,1384	0/0:13,0:13:39.13:0,39,2296	0/0:17,0:17:51.18:0,51,2889	0/0:16,0:16:48.16:0,48,2750	1/1:0,10:8:21.07:634,21,0	0/0:12,0:12:36.12:0,36,2135	0/0:23,0:22:63.17:0,63,3284	0/0:18,0:18:51.18:0,51,2927	0/0:15,0:15:45.15:0,45,2352	0/0:12,0:12:36.12:0,36,1636	0/0:30,0:30:87.30:0,87,4745	0/0:11,0:11:30.09:0,30,1213	0/0:3,0:3:9.02:0,9,307	0/0:27,0:27:81.28:0,81,4382	0/0:13,0:13:39.13:0,39,1821	0/0:14,0:14:39.13:0,39,1912	0/0:22,0:22:63.22:0,63,3359	0/0:16,0:16:48.16:0,48,2847
chr10	31740586	.	A	AT	1411.74	PASS	AB=0.649;AC=8;AF=0.148;AN=54;BaseQRankSum=5.000;DP=324;FS=1.205;HRun=3;HaplotypeScore=45.1407;InbreedingCoeff=0.5758;MQ=62.05;MQ0=1;MQRankSum=-2.614;QD=15.51;ReadPosRankSum=-1.325;VQSLOD=2.5420;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:45.14:0,45,538	0/0:10,0:10:26.20:0,26,158	0/0:6,0:4:6.02:0,6,70	0/0:5,0:4:11.91:0,12,102	0/0:16,0:16:40.88:0,41,239	0/0:18,0:18:41.49:0,41,257	0/0:8,0:8:16.33:0,16,127	0/1:21,26:43:88.86:654,0,89	0/0:9,0:9:18.66:0,19,117	0/0:7,0:7:21.06:0,21,252	0/0:12,0:12:33.09:0,33,384	0/0:4,0:4:12.04:0,12,144	0/0:6,0:6:18.06:0,18,216	0/0:4,0:4:9.03:0,9,108	./.	0/0:8,0:8:24.07:0,24,288	0/0:30,0:30:81.25:0,81,970	0/0:17,0:17:48.15:0,48,573	0/1:8,9:16:15.03:194,0,15	1/1:2,4:6:11.97:117,12,0	1/1:0,4:4:9.03:102,9,0	0/0:5,0:5:12.04:0,12,144	0/0:2,0:2:3.01:0,3,36	0/0:3,0:3:9.03:0,9,108	0/0:14,0:14:42.13:0,42,504	0/0:21,0:21:63.18:0,63,745	1/1:4,13:17:45.09:490,45,0	0/0:10,0:10:30.09:0,30,360
chr10	31740590	.	A	AT	2991.41	PASS	AB=1.000;AC=19;AF=0.352;AN=54;BaseQRankSum=0.380;DP=312;FS=4.443;HRun=8;HaplotypeScore=38.1883;InbreedingCoeff=0.8434;MQ=58.68;MQ0=1;MQRankSum=1.451;QD=21.07;ReadPosRankSum=-0.035;VQSLOD=3.1545;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:51.03:0,51,466	1/1:1,7:8:21.53:243,22,0	0/0:5,0:2:3:0,3,27	0/0:5,0:4:8.99:0,9,82	1/1:1,15:16:42.12:485,42,0	1/1:2,14:16:42.12:485,42,0	1/1:1,5:7:8.09:132,8,0	1/1:37,0:39:54.34:710,54,0	1/1:1,6:7:18.05:208,18,0	0/0:7,0:7:15.01:0,15,137	0/0:11,0:11:30:0,30,270	0/0:4,0:4:12.01:0,12,110	0/0:6,0:6:14.95:0,15,127	0/0:5,0:5:15:0,15,133	./.	0/0:11,0:11:23.99:0,24,216	0/0:28,0:28:75.04:0,75,686	0/0:16,0:16:36:0,36,324	0/1:15,0:14:0.46:218,0,0	1/1:7,0:7:14.94:138,15,0	1/1:4,0:4:9.03:102,9,0	0/0:4,0:4:9:0,9,82	0/0:1,0:1:3:0,3,27	0/0:4,0:4:9:0,9,82	0/0:15,0:15:39.02:0,39,357	0/0:20,0:20:48.02:0,48,439	1/1:19,0:19:42.12:471,42,0	0/0:10,0:10:30.02:0,30,275
chr10	31740830	.	A	AT	315.03	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.311;DP=565;FS=6.932;HRun=1;HaplotypeScore=81.0324;InbreedingCoeff=0.9780;MQ=72.75;MQ0=0;MQRankSum=-4.271;QD=31.50;ReadPosRankSum=-0.020;VQSLOD=2.7924;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,111,1545	0/0:9,0:9:27.09:0,27,377	0/0:12,0:12:30.06:0,30,380	0/0:14,0:14:39.06:0,39,477	0/0:29,0:29:87.27:0,87,1195	0/0:31,0:31:93.29:0,93,1271	0/0:19,0:19:54.18:0,54,749	0/0:32,0:32:93.31:0,93,1297	0/0:28,0:28:81.27:0,81,1130	0/0:30,0:30:87.29:0,87,1213	0/0:24,0:24:72.24:0,72,1004	0/0:15,0:15:33.11:0,33,461	0/0:17,0:17:45.14:0,45,603	0/0:18,0:18:51.17:0,51,712	1/1:0,10:10:30.10:409,30,0	0/0:23,0:23:57.19:0,57,796	0/0:20,0:19:57.19:0,57,797	0/0:14,0:14:36.12:0,36,501	0/0:22,0:22:66.19:0,66,882	0/0:22,0:22:66.22:0,66,923	0/0:15,0:15:45.14:0,45,612	0/0:8,0:8:21.07:0,21,286	0/0:13,0:13:36.12:0,36,489	0/0:20,0:20:57.19:0,57,789	0/0:14,0:14:42.14:0,42,586	0/0:35,0:35:99:0,99,1384	0/0:24,0:24:66.19:0,66,888	0/0:5,0:5:15.05:0,15,210
chr10	31740900	.	T	TG	1002.33	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.465;DP=609;FS=2.836;HRun=0;HaplotypeScore=100.8947;InbreedingCoeff=0.9984;MQ=82.96;MQ0=0;MQRankSum=-4.843;QD=43.58;ReadPosRankSum=1.627;VQSLOD=3.7336;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:72.21:0,72,985	0/0:11,0:11:33.10:0,33,444	0/0:20,0:20:47.31:0,47,640	0/0:18,0:18:54.12:0,54,671	0/0:37,0:37:99:0,105,1401	0/0:32,0:32:93.29:0,93,1267	0/0:24,0:24:69.19:0,69,916	0/0:29,0:29:84.25:0,84,1117	0/0:19,0:19:51.17:0,51,713	0/0:32,0:32:93.31:0,93,1298	0/0:18,0:18:51.13:0,51,676	0/0:10,0:10:30.06:0,30,398	0/0:19,0:19:57.19:0,57,797	0/0:15,0:15:45.14:0,45,613	1/1:0,23:23:69.24:1097,69,0	0/0:20,0:20:60.20:0,60,839	0/0:19,0:19:54.15:0,54,734	0/0:20,0:20:60.20:0,60,839	0/0:19,0:19:54.17:0,54,739	0/0:25,0:25:75.09:0,75,977	0/0:18,0:18:51.17:0,51,713	0/0:23,0:23:66.21:0,66,907	0/0:10,0:10:30.10:0,30,420	0/0:12,0:12:33.11:0,33,462	0/0:27,0:27:78.20:0,78,1034	0/0:39,0:39:99:0,114,1542	0/0:31,0:31:90.30:0,90,1253	0/0:15,0:15:45.11:0,45,607
chr10	31741169	.	A	ACCT	38389.27	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-6.066;DP=626;FS=0.000;HRun=0;HaplotypeScore=88.0330;InbreedingCoeff=0.9872;MQ=75.26;MQ0=0;MQRankSum=-9.221;QD=64.52;ReadPosRankSum=5.579;VQSLOD=6.5217;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,20:23:60.21:1454,60,0	1/1:2,10:12:33.11:812,33,0	0/0:20,0:20:57.19:0,57,1019	0/0:11,0:11:33.11:0,33,598	1/1:2,35:38:93.32:2288,93,0	1/1:2,20:24:63.17:1478,63,0	1/1:0,7:7:21.07:516,21,0	1/1:8,36:46:99:3220,135,0	1/1:3,17:22:57.20:1368,57,0	1/1:4,32:37:99:2553,108,0	1/1:4,26:33:69.19:1638,69,0	1/1:1,27:32:78.27:1922,78,0	1/1:2,20:22:60.21:1477,60,0	1/1:2,20:23:63.22:1513,63,0	1/1:2,16:19:54.18:1295,54,0	1/1:1,14:16:42.14:1034,42,0	1/1:2,5:7:21.07:517,21,0	1/1:2,4:6:15.05:364,15,0	1/1:2,9:11:30.10:737,30,0	1/1:6,24:32:84.29:2055,84,0	1/1:2,18:21:54.19:1302,54,0	1/1:2,14:16:45.15:1107,45,0	1/1:1,22:25:69.24:1699,69,0	1/1:1,28:29:62.88:1518,63,0	1/1:1,20:22:63.22:1553,63,0	1/1:1,26:27:78.27:1891,78,0	1/1:1,31:33:93.32:2290,93,0	1/1:2,9:12:35.15:789,35,0
chr10	31741661	.	A	AC	6810.28	PASS	AB=0.596;AC=46;AF=0.821;AN=56;BaseQRankSum=-4.763;DP=471;FS=5.531;HRun=9;HaplotypeScore=58.7159;InbreedingCoeff=0.2352;MQ=68.53;MQ0=0;MQRankSum=-0.386;QD=15.91;ReadPosRankSum=1.889;VQSLOD=4.9709;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:9,14:23:38.76:393,39,0	1/1:1,0:5:2.84:15,3,0	0/0:24,0:17:28.42:0,28,206	0/0:19,0:17:14.01:0,14,167	1/1:10,2:14:14.29:125,14,0	1/1:10,4:27:26.10:185,26,0	1/1:8,1:19:20.01:124,20,0	1/1:7,12:19:26.80:269,27,0	1/1:1,0:10:14.20:70,14,0	1/1:5,11:16:32.61:326,33,0	1/1:4,24:28:19.04:427,19,0	1/1:2,13:15:33.09:365,33,0	1/1:3,13:16:29.91:322,30,0	0/1:3,17:20:7.32:236,0,7	1/1:5,0:9:2.84:14,3,0	1/1:3,14:17:16.06:405,16,0	1/1:5,16:21:36.10:398,36,0	1/1:0,10:10:24.06:265,24,0	1/1:6,9:15:27.01:274,27,0	0/1:5,16:22:21.03:459,0,21	0/1:6,6:12:34.06:115,0,34	0/1:5,8:13:13.92:145,0,14	0/1:3,10:13:10.51:292,0,11	0/1:8,13:21:16.01:296,0,16	1/1:3,10:13:24.06:265,24,0	1/1:7,9:16:30.08:328,30,0	1/1:2,19:21:19.05:430,19,0	1/1:2,11:13:24.06:265,24,0
chr10	31742009	.	G	GCAA	1402.40	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-6.618;DP=661;FS=0.000;HRun=0;HaplotypeScore=86.7736;InbreedingCoeff=0.9986;MQ=57.61;MQ0=1;MQRankSum=1.378;QD=51.94;ReadPosRankSum=1.325;VQSLOD=5.6203;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:90.29:0,90,1625	0/0:12,0:12:33.11:0,33,615	0/0:26,0:18:48.16:0,48,862	0/0:23,0:18:34.76:0,35,870	0/0:35,0:35:99:0,99,1816	0/0:25,0:25:72.23:0,72,1300	0/0:18,0:18:54.19:0,54,987	0/0:41,0:41:99:0,114,2020	0/0:28,0:28:84.27:0,84,1535	0/0:25,0:25:75.26:0,75,1366	0/0:26,0:26:78.22:0,78,1350	0/0:12,0:12:36.12:0,36,671	0/0:22,0:22:66.21:0,66,1191	0/0:13,0:13:39.13:0,39,720	1/1:1,24:27:63.17:1497,63,0	0/0:15,0:15:45.14:0,45,786	0/0:35,0:35:99:0,105,1923	0/0:17,0:17:48.16:0,48,894	0/0:22,0:21:63.15:0,63,1056	0/0:30,0:30:81.28:0,81,1491	0/0:21,0:21:60.21:0,60,1097	0/0:24,0:24:72.24:0,72,1312	0/0:23,0:23:66.21:0,66,1182	0/0:12,0:12:33.11:0,33,590	0/0:22,0:22:66.23:0,66,1220	0/0:33,0:33:99:0,99,1806	0/0:32,0:32:96.32:0,96,1725	0/0:11,0:11:30.10:0,30,547
chr10	31742705	.	GA	G	3979.76	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=10.937;DP=393;FS=5.328;HRun=6;HaplotypeScore=42.5607;InbreedingCoeff=0.9536;MQ=69.60;MQ0=2;MQRankSum=0.952;QD=25.84;ReadPosRankSum=-0.433;VQSLOD=3.1616;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:51.15:0,51,651	1/1:0,9:9:21.03:217,21,0	0/0:11,0:5:11.12:0,11,71	0/0:15,0:10:5.51:0,6,88	1/1:1,17:18:44.99:453,45,0	1/1:0,13:13:30.08:322,30,0	1/1:1,5:6:12.03:129,12,0	1/1:3,14:17:42.03:421,42,0	1/1:2,14:16:39.10:418,39,0	0/0:22,0:22:60.18:0,60,752	0/0:19,0:19:51.16:0,51,655	0/0:4,0:4:12.03:0,12,142	0/0:14,0:14:33.10:0,33,418	0/0:12,0:12:33.11:0,33,431	1/1:2,19:21:51.13:548,51,0	0/0:14,0:14:39.10:0,39,482	0/0:23,0:23:66.21:0,66,860	0/0:12,0:12:36.10:0,36,455	1/1:2,25:26:71.98:733,72,0	1/1:0,9:9:27.07:288,27,0	1/1:2,4:6:9.02:97,9,0	0/0:6,0:6:15.05:0,15,196	0/0:17,0:17:51.17:0,51,666	0/0:4,0:4:12.04:0,12,157	0/0:16,0:16:48.16:0,48,627	0/0:16,0:16:48.14:0,48,591	1/1:0,12:12:33.08:354,33,0	0/0:15,0:15:39.09:0,39,472
chr10	31743373	.	TAC	T	1373.80	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.554;DP=710;FS=2.342;HRun=0;HaplotypeScore=85.3694;InbreedingCoeff=0.9966;MQ=76.78;MQ0=0;MQRankSum=0.988;QD=44.32;ReadPosRankSum=2.086;VQSLOD=5.3155;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:57:99:0,169,3373	0/0:11,0:11:33.11:0,33,671	0/0:18,1:19:38.65:0,39,978	0/0:29,0:29:83.10:0,83,1605	0/0:29,0:29:87.30:0,87,1767	0/0:26,0:26:75.26:0,75,1522	0/0:26,0:26:78.27:0,78,1585	0/0:32,0:32:96.33:0,96,1930	0/0:28,0:28:84.29:0,84,1706	0/0:28,0:28:84.29:0,84,1707	0/0:12,0:12:36.12:0,36,731	0/0:24,0:24:72.25:0,72,1463	0/0:24,0:24:72.25:0,72,1462	0/0:34,0:34:99:0,102,2056	1/1:0,31:31:90.31:1469,90,0	0/0:34,0:34:99:0,102,2072	0/0:13,0:13:36.10:0,36,692	0/0:14,0:14:42.14:0,42,853	0/0:29,0:29:87.30:0,87,1740	0/0:26,0:26:78.27:0,78,1565	0/0:32,0:32:96.33:0,96,1934	0/0:10,0:10:30.10:0,30,609	0/0:22,0:22:63.20:0,63,1243	0/0:35,0:35:99:0,102,2073	0/0:11,0:11:33.11:0,33,671	0/0:33,0:33:96.33:0,96,1950	0/0:33,0:33:99:0,99,1970	0/0:8,0:8:24.08:0,24,488
chr10	31743579	.	GATAC	G	19231.02	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=2.170;DP=496;FS=5.190;HRun=0;HaplotypeScore=97.3999;InbreedingCoeff=0.9778;MQ=62.42;MQ0=0;MQRankSum=-4.529;QD=42.83;ReadPosRankSum=4.276;VQSLOD=5.1594;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,29:30:54.01:944,54,0	1/1:0,9:9:24.08:450,24,0	0/0:13,0:11:25.56:0,26,498	0/0:14,0:14:42.01:0,42,738	1/1:3,35:38:87.30:1644,87,0	1/1:2,19:21:42.14:797,42,0	1/1:0,18:17:42.14:796,42,0	1/1:1,17:18:51.10:809,51,0	1/1:1,13:14:30.10:568,30,0	1/1:1,29:29:87.29:1596,87,0	1/1:1,14:15:36.12:682,36,0	1/1:0,10:10:24.08:455,24,0	1/1:1,15:16:42.14:796,42,0	1/1:2,13:15:27.09:511,27,0	0/0:19,0:19:54.17:0,54,1367	1/1:1,15:16:36.10:682,36,0	1/1:1,15:16:33.11:622,33,0	1/1:0,7:7:15.05:283,15,0	1/1:3,13:16:39.12:705,39,0	1/1:2,39:41:93.32:1753,93,0	1/1:0,7:7:21.07:399,21,0	1/1:0,9:9:24.08:450,24,0	1/1:1,11:12:30.10:568,30,0	1/1:0,11:11:24.08:455,24,0	1/1:2,18:20:36.12:678,36,0	1/1:2,24:26:72.19:1229,72,0	1/1:3,25:28:60:1129,60,0	1/1:0,6:6:12.04:227,12,0
chr10	31743760	.	GA	G	3557.84	PASS	AC=20;AF=0.370;AN=54;BaseQRankSum=7.051;DP=408;FS=0.402;HRun=9;HaplotypeScore=45.7263;InbreedingCoeff=0.9335;MQ=60.91;MQ0=5;MQRankSum=0.604;QD=21.96;ReadPosRankSum=-0.088;VQSLOD=4.0198;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:43:99:0,111,1251	1/1:3,3:6:3:27,3,0	0/0:14,0:7:20.65:0,21,210	0/0:4,0:3:9.02:0,9,95	1/1:1,23:23:69.04:630,69,0	1/1:3,15:18:42.01:384,42,0	1/1:1,11:12:30.01:275,30,0	1/1:2,24:25:68.99:623,69,0	1/1:1,13:14:36.02:329,36,0	0/0:21,0:21:54.15:0,54,616	0/0:14,0:14:30.09:0,30,346	0/0:9,0:9:21.06:0,21,242	0/0:7,0:7:21.06:0,21,242	0/0:9,0:9:27.08:0,27,312	0/0:17,0:17:51.14:0,51,577	0/0:8,0:8:21.06:0,21,242	0/0:26,0:26:69.18:0,69,783	0/0:25,0:25:56.64:0,57,674	1/1:2,11:13:32.65:302,33,0	1/1:4,12:16:33.01:302,33,0	1/1:2,11:12:30.01:275,30,0	./.	0/0:1,0:1:3.01:0,3,35	0/0:7,0:7:18.05:0,18,208	0/0:12,0:12:36.11:0,36,415	0/0:20,0:20:56.96:0,57,637	1/1:2,18:20:45.02:412,45,0	0/0:8,0:8:20.93:0,21,223
chr10	31744314	.	GAGA	G	10570.27	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=12.489;DP=574;FS=10.067;HRun=0;HaplotypeScore=99.5451;InbreedingCoeff=0.9818;MQ=59.88;MQ0=5;MQRankSum=-1.298;QD=37.48;ReadPosRankSum=4.280;VQSLOD=5.7211;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,21:25:48.16:784,48,0	0/0:6,0:6:18.06:0,18,400	0/0:20,0:18:45.13:0,45,929	0/0:18,0:19:41.81:0,42,844	0/0:19,0:19:57.18:0,57,1229	0/0:9,0:9:27.09:0,27,601	0/0:31,0:31:90.29:0,90,1947	0/0:28,0:28:81.28:0,81,1809	0/0:33,0:33:96.31:0,96,2040	1/1:1,20:19:54.16:836,54,0	1/1:2,8:10:18.06:294,18,0	1/1:1,27:27:69.24:1124,69,0	1/1:0,22:22:59.94:978,60,0	1/1:5,19:22:57.19:928,57,0	0/0:34,0:34:99:0,102,2106	1/1:2,15:17:42.14:686,42,0	1/1:3,24:27:66.23:1077,66,0	1/1:2,18:20:48.16:782,48,0	0/0:21,0:21:54.19:0,54,1204	0/0:9,0:9:27.09:0,27,558	0/0:43,0:43:99:0,120,2672	1/1:2,9:10:24.08:391,24,0	1/1:0,12:10:21.07:343,21,0	1/1:4,29:33:71.91:1175,72,0	1/1:0,10:9:21.07:342,21,0	1/1:2,16:16:45.15:734,45,0	0/0:19,0:19:54.17:0,54,1141	1/1:0,3:3:6.02:98,6,0
chr10	31744723	.	TTCCTAAC	T	11663.83	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=13.462;DP=630;FS=4.755;HRun=0;HaplotypeScore=149.0738;InbreedingCoeff=0.9923;MQ=51.41;MQ0=26;MQRankSum=-15.085;QD=54.25;ReadPosRankSum=-0.664;VQSLOD=4.1439;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,135,5309	1/1:0,10:10:27.09:686,27,0	0/0:25,0:8:21.96:0,22,800	0/0:29,0:10:30.10:0,30,1208	1/1:1,30:30:72.25:1856,72,0	1/1:4,25:28:69.24:1819,69,0	1/1:2,8:8:15.05:395,15,0	1/1:4,21:18:48.14:1067,48,0	1/1:2,25:27:48.16:1265,48,0	0/0:29,0:29:84.28:0,84,3139	0/0:19,0:19:54.19:0,54,2161	0/0:18,0:18:45.15:0,45,1699	0/0:19,0:19:57.20:0,57,2239	0/0:19,0:19:54.19:0,54,2181	0/0:24,0:24:69.24:0,69,2639	0/0:15,0:15:45.15:0,45,1817	0/0:22,0:22:57.20:0,57,2224	0/0:21,0:21:63.22:0,63,2338	1/1:2,19:17:48.16:1161,48,0	1/1:0,25:24:63.17:1559,63,0	1/1:3,14:17:29.97:613,30,0	0/0:22,0:22:66.23:0,66,2663	0/0:24,0:23:66.23:0,66,2596	0/0:27,0:27:69.24:0,69,2621	0/0:21,0:20:60.21:0,60,2400	0/0:25,0:25:69.24:0,69,2720	1/1:2,18:20:48.16:1241,48,0	0/0:5,0:5:12.04:0,12,434
chr10	31745203	.	AGTGTGTGT	A	1223.47	PASS	AB=0.900;AC=24;AF=0.500;AN=48;BaseQRankSum=5.077;DP=393;FS=1.928;HRun=0;HaplotypeScore=134.0749;InbreedingCoeff=0.5071;MQ=69.47;MQ0=13;MQRankSum=-0.707;QD=7.41;ReadPosRankSum=1.495;VQSLOD=2.4526;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:11,1:12:8.99:105,9,0	0/0:4,0:6:9.02:0,9,194	./.	0/0:29,0:21:3.01:0,3,44	0/0:8,0:17:2.75:0,3,64	0/1:12,0:14:0.11:0,0,0	0/0:15,0:15:17.75:0,18,338	0/0:22,0:21:24.08:0,24,577	0/0:9,0:14:18.05:0,18,384	0/1:12,4:16:0.36:322,0,0	./.	1/1:3,2:5:8.93:64,9,0	1/1:5,1:7:2.97:20,3,0	1/1:5,3:7:3.01:38,3,0	./.	1/1:9,1:10:11.95:116,12,0	1/1:9,2:11:3.01:76,3,0	0/1:6,2:7:67.45:142,0,67	0/0:10,0:12:18.03:0,18,459	0/0:9,0:13:3.90:0,4,106	0/0:15,0:14:12.03:0,12,154	1/1:9,6:15:9.46:107,9,0	1/1:15,5:20:10.81:104,11,0	./.	1/1:9,4:13:2.97:21,3,0	1/1:18,3:21:11.48:237,11,0	0/0:17,0:21:36.08:0,36,658	0/1:5,0:4:23.84:36,0,24
chr10	31745234	.	G	GCC	128.77	PASS	AB=0.946;AC=10;AF=0.185;AN=54;BaseQRankSum=3.427;DP=345;FS=7.488;HRun=0;HaplotypeScore=100.7025;InbreedingCoeff=-0.0522;MQ=35.68;MQ0=15;MQRankSum=0.441;QD=0.98;ReadPosRankSum=0.129;VQSLOD=1.4042;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:8,0:8:2.75:47,0,3	0/0:5,0:5:0.87:0,1,87	0/0:11,0:2:6.02:0,6,76	0/0:10,0:3:8.06:0,8,99	0/0:18,0:18:3.01:0,3,49	0/0:9,0:9:2.94:0,3,29	0/0:10,0:10:18.02:0,18,267	0/0:17,0:13:38.97:0,39,482	0/0:15,0:15:2.60:0,3,147	0/1:19,2:21:99:117,0,373	./.	0/0:13,0:13:9.78:0,10,59	0/0:2,0:2:2.84:0,3,14	1/1:10,1:10:1.82:5,2,0	0/1:16,0:16:0:0,0,0	0/0:7,0:7:0.58:0,1,19	0/1:7,1:8:11.05:11,0,40	0/0:6,0:6:17.90:0,18,154	0/0:17,0:13:26.31:0,26,350	0/0:14,0:14:2.02:0,2,12	0/0:12,0:10:12.02:0,12,153	0/1:21,1:21:13.40:13,0,37	0/1:21,0:21:14.68:15,0,22	0/0:12,0:12:2.96:0,3,19	0/1:10,3:13:5.57:31,0,6	0/1:11,0:11:7.95:8,0,182	0/0:19,0:19:41.76:0,42,417	0/0:4,0:4:0.29:0,0,91
chr10	31745236	.	G	GCC	676.53	PASS	AB=0.984;AC=23;AF=0.442;AN=52;BaseQRankSum=6.987;DP=339;FS=0.000;HRun=0;HaplotypeScore=96.4364;InbreedingCoeff=0.2176;MQ=35.33;MQ0=14;MQRankSum=-0.637;QD=3.84;ReadPosRankSum=0.437;VQSLOD=2.2093;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,0:7:8.99:130,9,0	0/1:5,0:5:0.88:1,0,86	0/0:9,0:1:3.01:0,3,37	0/0:10,0:3:6.02:0,6,91	0/0:20,0:20:3.01:0,3,49	0/0:11,0:11:5.72:0,6,32	0/0:10,0:10:17.98:0,18,252	0/0:17,0:13:38.93:0,39,470	0/1:15,0:15:0.31:0,0,122	0/1:19,1:20:90.55:91,0,304	./.	0/1:13,0:13:6.10:53,0,6	1/1:3,0:3:1.95:18,2,0	1/1:11,0:10:3.01:38,3,0	0/1:16,0:16:0:0,0,0	1/1:5,1:6:11.95:116,12,0	0/1:7,0:7:12.04:12,0,12	0/1:6,0:6:15.67:16,0,84	0/0:17,0:13:26.32:0,26,341	0/0:15,0:15:2.02:0,2,12	0/0:12,0:10:12.02:0,12,153	1/1:20,1:20:8.83:106,9,0	1/1:19,0:19:10.81:104,11,0	./.	1/1:14,0:14:3.69:22,4,0	0/1:8,1:9:93.81:94,0,105	0/0:19,0:19:41.65:0,42,400	0/1:4,0:4:32.92:33,0,39
chr10	31745688	.	AT	A	3683.97	PASS	AB=0.733;AC=22;AF=0.393;AN=56;BaseQRankSum=4.089;DP=417;FS=11.978;HRun=10;HaplotypeScore=55.8635;InbreedingCoeff=0.8642;MQ=68.19;MQ0=1;MQRankSum=0.012;QD=19.49;ReadPosRankSum=1.784;VQSLOD=3.8731;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:39.11:0,39,431	1/1:0,7:7:21:182,21,0	0/0:15,0:15:17.28:0,17,146	0/0:13,0:14:16.29:0,16,161	1/1:2,12:16:40.06:324,40,0	1/1:5,15:20:11.83:331,12,0	1/1:1,16:18:47.01:397,47,0	1/1:3,7:10:17.98:156,18,0	1/1:0,12:12:35.99:312,36,0	0/0:17,0:17:39.11:0,39,431	0/0:11,0:12:17.88:0,18,180	0/0:27,0:27:75.08:0,75,789	0/0:19,0:19:54.15:0,54,597	0/0:14,0:14:39.06:0,39,418	0/1:4,10:14:3.21:204,0,3	0/0:9,0:8:21.06:0,21,232	0/0:9,0:9:27.07:0,27,298	0/0:8,0:8:18.01:0,18,186	1/1:2,10:12:32.99:286,33,0	1/1:2,18:20:50.98:443,51,0	1/1:0,17:17:44.98:391,45,0	0/0:10,0:10:27.03:0,27,285	0/0:16,0:16:42.11:0,42,463	0/0:13,0:13:30.08:0,30,332	0/1:13,2:15:13.01:13,0,326	0/0:17,1:18:22.07:0,22,472	1/1:2,26:28:47.82:644,48,0	0/0:10,0:10:18.05:0,18,199
chr10	31745989	.	CTCTT	C	2797.22	PASS	AB=0.955;AC=39;AF=0.750;AN=52;BaseQRankSum=1.050;DP=421;FS=19.640;HRun=0;HaplotypeScore=123.7995;InbreedingCoeff=0.0704;MQ=56.39;MQ0=13;MQRankSum=1.534;QD=7.77;ReadPosRankSum=-1.058;VQSLOD=1.5140;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:5,5:10:17.85:138,18,0	0/1:5,0:5:26.07:63,0,26	0/0:35,0:14:10.54:0,11,242	0/1:73,0:27:14.08:14,0,211	0/1:6,0:6:0:0,0,0	0/1:24,0:24:13.58:191,0,14	1/1:17,0:17:13.16:115,13,0	1/1:32,0:32:65.38:504,65,0	0/1:21,0:19:1.54:145,0,2	0/1:5,0:5:25.05:48,0,25	1/1:3,2:5:1.11:64,1,0	1/1:5,1:6:4.69:37,5,0	1/1:2,1:3:1.18:22,1,0	1/1:3,1:4:4.76:40,5,0	0/0:24,0:23:41.59:0,42,506	./.	1/1:7,4:11:16.42:137,16,0	1/1:8,5:13:25.96:202,26,0	0/1:28,0:26:2.83:327,0,3	1/1:17,0:17:20:168,20,0	1/1:21,0:20:15.98:162,16,0	1/1:5,1:6:2:24,2,0	1/1:5,2:7:8.98:73,9,0	0/1:7,2:9:10.82:53,0,11	1/1:0,4:4:11.99:100,12,0	0/1:5,2:6:51.11:51,0,85	1/1:25,1:25:21.49:266,21,0	./.
chr10	31745991	.	CTT	C	4080.13	PASS	AB=1.000;AC=42;AF=0.840;AN=50;BaseQRankSum=2.004;DP=412;FS=10.793;HRun=3;HaplotypeScore=109.9899;InbreedingCoeff=0.3101;MQ=56.89;MQ0=12;MQRankSum=0.026;QD=11.79;ReadPosRankSum=1.142;VQSLOD=-0.2632;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,0:10:17.85:138,18,0	1/1:5,0:5:7.86:73,8,0	0/0:35,0:13:7.44:0,7,235	0/1:73,0:28:11.23:11,0,267	./.	1/1:24,0:24:13.47:204,13,0	1/1:17,0:17:13.46:115,13,0	1/1:10,18:28:69.21:498,69,0	0/1:20,0:18:4.12:161,0,4	0/1:5,0:5:4.45:49,0,4	1/1:5,0:5:5.68:70,6,0	1/1:6,0:6:8.81:58,9,0	1/1:2,0:2:5.92:42,6,0	1/1:4,0:4:8.86:60,9,0	0/0:18,0:23:42.32:0,42,399	./.	1/1:11,0:11:23.44:176,23,0	1/1:13,0:13:29.81:223,30,0	1/1:24,2:25:42.81:542,43,0	1/1:13,5:18:31.70:340,32,0	1/1:19,1:19:25.68:250,26,0	1/1:6,0:6:1.91:24,2,0	1/1:7,0:7:8.98:73,9,0	1/1:9,0:9:13.39:88,13,0	1/1:4,0:4:11.99:100,12,0	0/1:6,0:6:20.90:48,0,21	1/1:17,10:26:68.80:741,69,0	./.
chr10	31746036	.	T	TCA	6651.73	PASS	AB=0.588;AC=29;AF=0.518;AN=56;BaseQRankSum=-6.240;DP=523;FS=156.757;HRun=0;HaplotypeScore=134.0288;InbreedingCoeff=0.8835;MQ=59.43;MQ0=3;MQRankSum=2.469;QD=33.59;ReadPosRankSum=3.434;VQSLOD=0.8594;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,18:23:45.15:738,45,0	0/0:7,0:7:15.05:0,15,186	0/0:34,0:27:47.29:0,47,513	0/0:31,0:22:15.59:0,16,205	0/0:21,0:21:45.06:0,45,524	0/0:25,0:25:60.19:0,60,744	0/0:23,0:23:60.19:0,60,742	0/0:30,0:30:60.18:0,60,734	0/0:25,0:25:72.18:0,72,874	1/1:3,5:8:15.05:234,15,0	1/1:3,6:9:18.06:295,18,0	0/1:3,5:10:15.12:181,0,15	1/1:2,9:11:21.07:344,21,0	1/1:4,10:14:30.10:484,30,0	0/0:23,0:23:51.16:0,51,632	1/1:0,3:3:6.02:98,6,0	1/1:3,18:21:42.14:682,42,0	1/1:1,23:23:62.95:996,63,0	0/0:31,0:30:48.14:0,48,595	0/0:22,0:22:42.09:0,42,501	0/0:30,0:30:60.14:0,60,722	1/1:2,9:11:21.07:344,21,0	1/1:4,12:16:36.12:590,36,0	1/1:7,21:28:51.17:837,51,0	1/1:0,9:9:24.08:394,24,0	1/1:0,8:8:24.08:384,24,0	0/0:23,0:23:60.17:0,60,730	1/1:1,1:2:3.01:49,3,0
chr10	31747318	.	CCTTCT	C	9462.09	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=18.446;DP=501;FS=25.076;HRun=0;HaplotypeScore=200.3815;InbreedingCoeff=0.9808;MQ=77.29;MQ0=0;MQRankSum=-17.680;QD=52.57;ReadPosRankSum=6.806;VQSLOD=3.2446;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,18:18:54.18:948,54,0	0/0:10,0:10:30.10:0,30,918	0/0:12,0:12:36.12:0,36,1020	0/0:18,0:19:32.83:0,33,1358	0/0:26,0:26:78.27:0,78,2595	0/0:31,0:31:93.31:0,93,3022	0/0:29,0:29:87.27:0,87,2681	0/0:30,0:30:90.31:0,90,2955	0/0:35,0:35:99:0,105,3447	1/1:0,14:14:42.14:798,42,0	1/1:0,12:12:36.12:643,36,0	1/1:0,15:15:45.15:813,45,0	1/1:1,11:12:36.11:619,36,0	1/1:0,13:13:39.13:698,39,0	0/0:23,0:23:69.24:0,69,2284	1/1:0,11:11:33.11:597,33,0	1/1:1,9:10:24.08:424,24,0	1/1:0,2:2:6.02:102,6,0	0/0:24,0:24:72.25:0,72,2336	0/0:31,0:31:93.31:0,93,2980	0/0:16,0:16:48.16:0,48,1585	1/1:1,21:22:66.23:1176,66,0	1/1:0,11:11:33.11:591,33,0	1/1:2,9:11:30.06:498,30,0	1/1:0,11:11:30.10:540,30,0	1/1:0,14:14:42.14:793,42,0	0/0:35,0:35:99:0,105,3439	1/1:0,4:4:12.04:222,12,0
chr10	31747324	.	AGATTTACAG	A	13316.49	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=18.461;DP=516;FS=25.047;HRun=0;HaplotypeScore=234.5280;InbreedingCoeff=0.9803;MQ=80.73;MQ0=0;MQRankSum=-18.148;QD=74.81;ReadPosRankSum=7.344;VQSLOD=3.1921;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,18:18:51.18:1278,51,0	0/0:8,0:8:24.08:0,24,1100	0/0:13,0:13:39.13:0,39,1636	0/0:24,0:24:71.83:0,72,2962	0/0:28,0:28:81.28:0,81,3873	0/0:31,0:31:90.29:0,90,4028	0/0:30,0:30:90.31:0,90,4240	0/0:33,0:33:99:0,99,4428	0/0:36,0:36:99:0,108,5183	1/1:0,14:14:42.14:1123,42,0	1/1:0,12:12:36.12:922,36,0	1/1:0,15:15:45.15:1161,45,0	1/1:0,11:11:33.11:849,33,0	1/1:0,13:13:39.13:1000,39,0	0/0:25,0:25:72.25:0,72,3532	1/1:0,11:11:33.11:852,33,0	1/1:0,9:9:21.96:543,22,0	1/1:0,2:2:6.02:146,6,0	0/0:24,0:24:72.24:0,72,3181	0/0:32,0:32:93.32:0,93,4409	0/0:17,0:17:51.17:0,51,2393	1/1:2,21:23:69.24:1724,69,0	1/1:1,11:12:33.11:847,33,0	1/1:0,9:9:27.09:665,27,0	1/1:0,11:11:30.10:773,30,0	1/1:0,14:14:42.14:1118,42,0	0/0:37,0:37:99:0,105,4603	1/1:0,4:4:12.04:315,12,0
chr10	31747332	.	AG	A	5005.78	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=19.070;DP=565;FS=30.033;HRun=2;HaplotypeScore=189.3711;InbreedingCoeff=0.9864;MQ=86.28;MQ0=0;MQRankSum=-17.100;QD=25.28;ReadPosRankSum=7.130;VQSLOD=1.9062;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:21:56.52:472,57,0	0/0:7,0:7:21.07:0,21,315	0/0:17,0:17:45.13:0,45,634	0/0:29,0:29:80.76:0,81,1160	0/0:26,0:26:78.26:0,78,1168	0/0:32,0:32:93.31:0,93,1384	0/0:32,0:32:96.28:0,96,1355	0/0:38,0:38:99:0,114,1672	0/0:37,0:37:99:0,111,1620	1/1:14,4:18:54.09:541,54,0	1/1:13,0:13:38.97:332,39,0	1/1:16,0:16:48:423,48,0	1/1:11,1:12:36:323,36,0	1/1:14,0:14:41.97:360,42,0	0/0:27,0:27:81.27:0,81,1214	1/1:11,0:11:33:289,33,0	1/1:10,0:10:24:221,24,0	1/1:3,0:3:8.89:82,9,0	0/0:26,0:26:78.24:0,78,1128	0/0:35,0:35:99:0,105,1533	0/0:26,0:26:75.24:0,75,1103	1/1:21,5:26:71.84:632,72,0	1/1:11,3:14:32.98:283,33,0	1/1:9,1:10:29.43:236,29,0	1/1:11,0:11:29.99:261,30,0	1/1:14,1:15:45.07:441,45,0	0/0:35,0:35:99:0,99,1462	1/1:4,0:4:12.01:110,12,0
chr10	31747516	.	TCATACTCTG	T	11474.80	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=15.964;DP=538;FS=4.541;HRun=0;HaplotypeScore=170.0309;InbreedingCoeff=0.9601;MQ=59.63;MQ0=2;MQRankSum=-15.871;QD=62.36;ReadPosRankSum=0.124;VQSLOD=4.6117;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,16:19:42.14:1288,42,0	0/0:15,0:14:42.13:0,42,1784	0/0:22,0:11:33.11:0,33,1377	0/0:24,0:11:27.56:0,28,928	0/0:27,0:27:78.27:0,78,3683	0/0:21,0:21:63.22:0,63,3027	0/0:36,0:33:93.23:0,93,4053	0/0:28,0:28:84.27:0,84,3702	0/0:38,0:38:99:0,114,5504	1/1:1,17:18:42.14:1327,42,0	1/1:4,12:16:36.12:958,36,0	1/1:2,11:13:30.10:947,30,0	1/1:3,10:13:18.06:568,18,0	1/1:1,6:7:21.07:644,21,0	0/0:26,0:25:75.24:0,75,3523	1/1:1,9:10:24.03:682,24,0	1/1:1,14:15:21.05:663,21,0	1/1:0,4:4:8.99:209,9,0	0/0:28,0:28:84.27:0,84,3841	0/0:32,0:32:93.31:0,93,4262	0/0:37,0:37:93.32:0,93,4572	1/1:0,15:15:42.10:1073,42,0	1/1:1,17:18:48.16:1271,48,0	1/1:1,11:12:11.54:378,12,0	1/1:2,11:13:24.08:684,24,0	1/1:0,9:9:24.07:689,24,0	0/0:20,0:20:60.21:0,60,2832	1/1:0,2:2:3.01:95,3,0
chr10	31747754	.	GAA	G	6607.07	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=17.207;DP=506;FS=3.167;HRun=2;HaplotypeScore=147.6974;InbreedingCoeff=0.9522;MQ=66.50;MQ0=0;MQRankSum=-16.742;QD=43.18;ReadPosRankSum=2.121;VQSLOD=4.9792;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,13:12:30.10:487,30,0	0/0:19,1:20:11.43:0,11,1110	0/0:40,0:37:99:0,108,2117	0/0:27,0:26:78.24:0,78,1500	0/0:30,0:30:90.31:0,90,1815	0/0:30,0:30:90.31:0,90,1787	0/0:27,0:27:81.28:0,81,1635	0/0:24,0:24:72.25:0,72,1457	0/0:26,0:26:78.26:0,78,1538	1/1:0,15:15:45.10:679,45,0	1/1:0,12:12:36.12:568,36,0	1/1:0,10:8:24.08:390,24,0	1/1:0,7:7:21.07:341,21,0	1/1:0,4:3:6.02:97,6,0	0/0:19,0:18:54.18:0,54,1077	1/1:0,6:6:18.06:293,18,0	1/1:0,6:6:12.04:195,12,0	1/1:0,2:2:6.02:96,6,0	0/0:18,0:17:51.14:0,51,996	0/0:29,0:29:87.29:0,87,1734	0/0:33,0:33:99:0,99,1949	1/1:0,20:20:60.20:975,60,0	1/1:0,13:14:42.14:673,42,0	1/1:0,12:12:32.35:498,32,0	1/1:0,11:11:27.09:439,27,0	1/1:0,18:18:45.15:729,45,0	0/0:30,0:30:90.30:0,90,1793	1/1:0,3:3:9.03:146,9,0
chr10	31747894	.	T	TTAAC	12456.30	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=17.968;DP=561;FS=100.434;HRun=0;HaplotypeScore=129.7142;InbreedingCoeff=0.9911;MQ=92.75;MQ0=0;MQRankSum=-16.339;QD=53.92;ReadPosRankSum=-0.630;VQSLOD=1.5798;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:22:59.92:1119,60,0	0/0:20,0:19:57.19:0,57,1034	0/0:38,0:38:90.70:0,91,1580	0/0:26,0:25:53.36:0,53,969	0/0:19,0:19:54.16:0,54,946	0/0:24,0:24:69.24:0,69,1265	0/0:17,0:17:48.09:0,48,787	0/0:31,0:31:90.28:0,90,1558	0/0:31,0:31:93.31:0,93,1695	1/1:23,0:22:63.17:1407,63,0	1/1:11,0:11:29.98:596,30,0	1/1:12,0:12:27.08:628,27,0	1/1:21,0:21:53.99:1048,54,0	1/1:15,0:15:41.98:840,42,0	0/0:20,0:20:60.21:0,60,1114	1/1:18,0:18:53.93:1107,54,0	1/1:9,0:9:21.04:444,21,0	1/1:12,0:12:32.97:622,33,0	0/0:21,0:21:60.21:0,60,1114	0/0:27,0:27:69.15:0,69,1242	0/0:24,0:24:72.23:0,72,1303	1/1:11,7:20:30.09:718,30,0	1/1:17,0:17:42.10:904,42,0	1/1:14,0:14:36.12:857,36,0	1/1:14,0:14:42.05:930,42,0	1/1:20,0:20:48.11:1058,48,0	0/0:32,0:32:96.26:0,96,1649	1/1:3,0:3:9.01:178,9,0
chr10	31747898	.	C	CT	3515.12	PASS	AB=0.643;AC=24;AF=0.429;AN=56;BaseQRankSum=18.358;DP=565;FS=112.607;HRun=0;HaplotypeScore=126.7147;InbreedingCoeff=0.5171;MQ=94.14;MQ0=0;MQRankSum=-16.617;QD=15.35;ReadPosRankSum=3.249;VQSLOD=0.2407;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:11,12:23:5.05:316,0,5	0/0:20,0:20:60.20:0,60,837	0/0:39,0:39:99:0,116,1569	0/0:22,0:21:56.34:0,56,766	0/0:21,0:21:60.17:0,60,796	0/0:27,0:27:75.24:0,75,1030	0/0:17,0:17:51.09:0,51,656	0/0:32,0:32:93.29:0,93,1257	0/0:31,0:31:93.31:0,93,1300	1/1:5,17:21:43.02:451,43,0	0/1:5,5:10:11.35:125,0,11	1/1:2,8:10:24.86:203,25,0	1/1:10,11:21:5.41:238,5,0	1/1:6,9:15:1.37:222,1,0	0/0:21,0:21:63.21:0,63,880	1/1:9,13:22:28.11:383,28,0	1/1:3,5:8:2.69:92,3,0	0/1:6,6:12:11.26:149,0,11	0/0:22,0:22:63.21:0,63,881	0/0:25,0:25:72.24:0,72,1005	0/0:26,0:26:78.26:0,78,1088	1/1:8,8:16:13.99:227,14,0	0/1:6,12:18:18.01:243,0,18	0/1:7,7:14:24.08:165,0,24	1/1:5,10:15:27.94:266,28,0	1/1:8,12:20:21.23:390,21,0	0/0:32,0:32:96.30:0,96,1324	0/1:1,2:3:11.05:45,0,11
chr10	31747899	.	A	AACT	7335.53	PASS	AB=0.647;AC=29;AF=0.518;AN=56;BaseQRankSum=17.812;DP=573;FS=87.309;HRun=0;HaplotypeScore=138.9924;InbreedingCoeff=0.9009;MQ=93.77;MQ0=0;MQRankSum=-17.225;QD=31.62;ReadPosRankSum=1.475;VQSLOD=1.7035;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:10,12:22:10.63:519,0,11	0/0:21,0:20:60.19:0,60,1031	0/0:38,0:38:99:0,114,1789	0/0:24,0:23:63.19:0,63,1031	0/0:21,0:21:60.14:0,60,941	0/0:27,0:27:81.20:0,81,1313	0/0:18,0:18:48.13:0,48,789	0/0:32,0:32:93.28:0,93,1538	0/0:31,0:31:93.32:0,93,1640	1/1:5,17:21:61.95:898,62,0	1/1:5,5:10:23.27:296,23,0	1/1:2,8:10:8.19:346,8,0	1/1:10,11:21:40.66:604,41,0	1/1:6,9:15:40.52:514,41,0	0/0:21,0:21:63.21:0,63,1081	1/1:9,13:22:29.23:707,29,0	1/1:4,5:9:17.05:245,17,0	1/1:6,6:12:22.05:334,22,0	0/0:24,0:24:66.22:0,66,1130	0/0:26,0:26:75.23:0,75,1266	0/0:26,0:26:78.19:0,78,1312	1/1:8,8:16:13.13:426,13,0	1/1:5,12:17:25.51:537,26,0	1/1:8,7:15:41.05:526,41,0	1/1:5,10:15:40.65:561,41,0	1/1:11,12:23:45.08:724,45,0	0/0:32,0:32:93.32:0,93,1640	1/1:1,2:3:4.70:98,5,0
chr10	31748374	.	GATATATATATATATATATATATATATATATATATAT	G	4414.60	PASS	AC=16;AF=0.667;AN=24;BaseQRankSum=-0.351;DP=237;FS=0.000;HRun=0;HaplotypeScore=205.4789;InbreedingCoeff=0.4195;MQ=64.52;MQ0=0;MQRankSum=-2.254;QD=38.06;ReadPosRankSum=0.551;VQSLOD=3.6913;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	1/1:5,0:5:3.01:72,3,0	./.	0/0:14,0:9:3.01:0,3,81	1/1:12,11:23:26.93:2094,27,0	1/1:9,4:13:6.02:524,6,0	./.	1/1:19,0:19:3:48,3,0	1/1:9,0:9:6.01:132,6,0	./.	0/0:6,0:6:0.47:0,0,1	./.	./.	./.	0/0:5,0:5:3.01:0,3,187	./.	./.	./.	1/1:11,0:11:6.02:149,6,0	1/1:18,2:21:12.04:847,12,0	./.	./.	./.	0/0:5,0:5:0:0,0,0	./.	./.	1/1:10,5:15:6.02:548,6,0	./.
chr10	31748498	.	GTCTTCT	G	2591.78	PASS	AC=18;AF=0.750;AN=24;BaseQRankSum=0.399;DP=222;FS=14.703;HRun=0;HaplotypeScore=74.0908;InbreedingCoeff=0.9411;MQ=80.62;MQ0=4;MQRankSum=-2.830;QD=20.90;ReadPosRankSum=2.111;VQSLOD=2.0627;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	1/1:13,0:13:8.89:114,9,0	0/0:20,0:16:15.07:0,15,339	0/0:14,0:12:15:0,15,238	1/1:12,0:12:32.65:370,33,0	1/1:12,2:14:30.06:434,30,0	1/1:13,1:14:21:275,21,0	1/1:19,0:19:28.06:323,28,0	1/1:15,0:15:24.08:319,24,0	./.	./.	./.	./.	./.	0/0:6,0:6:14.98:0,15,297	./.	./.	./.	1/1:14,0:13:18.02:227,18,0	1/1:15,1:16:30.28:462,30,0	./.	./.	./.	./.	./.	./.	1/1:7,0:7:15.05:188,15,0	./.
chr10	31748510	.	TTCTTC	T	4106.20	PASS	AC=20;AF=0.769;AN=26;BaseQRankSum=-1.663;DP=154;FS=6.932;HRun=0;HaplotypeScore=68.1043;InbreedingCoeff=0.8579;MQ=70.77;MQ0=4;MQRankSum=-2.580;QD=32.33;ReadPosRankSum=3.439;VQSLOD=2.1407;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	1/1:0,9:9:12.98:203,13,0	0/0:13,0:9:10.04:0,10,335	0/0:8,0:6:15.04:0,15,254	1/1:9,4:13:14.32:553,14,0	1/1:6,12:18:38.30:593,38,0	1/1:5,10:15:21.07:363,21,0	1/1:11,4:15:16.62:541,17,0	1/1:1,15:16:24.08:517,24,0	./.	./.	./.	./.	./.	0/0:6,0:6:11.57:0,12,221	./.	./.	./.	1/1:1,8:8:21.07:360,21,0	1/1:13,3:16:22.63:612,23,0	1/1:6,0:6:3:29,3,0	./.	./.	./.	./.	./.	1/1:0,10:10:15.05:334,15,0	./.
chr10	31748511	.	TCTTC	T	3484.70	PASS	AB=0.940;AC=19;AF=0.731;AN=26;BaseQRankSum=-0.315;DP=154;FS=3.289;HRun=0;HaplotypeScore=66.6067;InbreedingCoeff=0.5026;MQ=67.75;MQ0=4;MQRankSum=-1.892;QD=26.01;ReadPosRankSum=3.492;VQSLOD=3.3569;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	1/1:9,0:9:12.47:142,12,0	0/0:13,0:9:26.10:0,26,349	0/0:7,0:5:15.04:0,15,250	1/1:13,0:13:8.98:511,9,0	1/1:17,1:18:38.49:536,38,0	0/1:13,2:15:3.54:322,0,4	0/1:14,1:15:0.96:458,0,1	1/1:16,0:16:24.08:367,24,0	./.	./.	./.	./.	./.	0/1:6,0:6:4.79:5,0,150	./.	./.	./.	1/1:9,0:8:20.56:299,21,0	1/1:17,0:16:19.20:606,19,0	1/1:6,0:6:2.50:9,2,0	./.	./.	./.	./.	./.	1/1:10,0:10:15.05:231,15,0	./.
chr10	31748513	.	TTC	T	1659.51	PASS	AC=20;AF=0.769;AN=26;BaseQRankSum=1.418;DP=159;FS=0.000;HRun=0;HaplotypeScore=71.1250;InbreedingCoeff=0.7153;MQ=63.26;MQ0=6;MQRankSum=-1.014;QD=12.48;ReadPosRankSum=2.562;VQSLOD=3.2237;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	1/1:9,0:9:12.89:95,13,0	0/0:14,0:8:13.99:0,14,144	0/0:6,0:4:12:0,12,112	1/1:14,1:15:20.09:291,20,0	1/1:18,0:18:36.92:233,37,0	1/1:15,0:15:1.39:105,1,0	1/1:14,1:15:16.48:255,16,0	1/1:16,0:16:23.76:172,24,0	./.	./.	./.	./.	./.	0/0:6,0:6:4.36:0,4,31	./.	./.	./.	1/1:9,0:8:20.95:172,21,0	1/1:19,0:18:6.90:309,7,0	1/1:1,6:7:3:29,3,0	./.	./.	./.	./.	./.	1/1:10,0:10:14.93:112,15,0	./.
chr10	31748739	.	T	TG	5147.10	PASS	AB=0.600;AC=29;AF=0.518;AN=56;BaseQRankSum=15.250;DP=472;FS=37.972;HRun=1;HaplotypeScore=81.7452;InbreedingCoeff=0.9090;MQ=101.82;MQ0=0;MQRankSum=-12.813;QD=36.25;ReadPosRankSum=1.689;VQSLOD=2.3753;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,14:14:30.10:449,30,0	0/0:9,0:9:27.09:0,27,350	0/0:27,0:27:78.18:0,78,964	0/0:32,0:32:77.07:0,77,989	0/0:29,0:29:84.27:0,84,1087	0/0:25,0:25:75.19:0,75,940	0/0:19,0:19:54.18:0,54,701	0/0:26,0:26:69.22:0,69,884	0/0:28,0:28:81.26:0,81,1052	1/1:2,11:13:36.05:511,36,0	1/1:2,14:16:39.13:571,39,0	1/1:1,8:9:24.08:353,24,0	1/1:0,6:6:15.05:224,15,0	1/1:0,5:5:15.05:224,15,0	0/0:31,0:31:93.29:0,93,1193	0/1:3,6:9:14.88:284,0,15	1/1:0,10:10:30.10:448,30,0	1/1:0,6:6:15.05:225,15,0	0/0:23,0:23:63.18:0,63,780	0/0:31,0:31:90.28:0,90,1151	0/0:26,0:26:72.23:0,72,931	1/1:3,9:12:27.09:402,27,0	1/1:0,19:19:51.07:733,51,0	1/1:0,7:7:15.05:224,15,0	1/1:2,4:6:14.79:141,15,0	1/1:1,6:7:15.05:224,15,0	0/0:24,0:24:72.23:0,72,920	1/1:0,3:3:9.03:135,9,0
chr10	31749094	.	T	TGA	8831.65	PASS	AB=0.553;AC=29;AF=0.518;AN=56;BaseQRankSum=17.456;DP=647;FS=5.229;HRun=0;HaplotypeScore=121.6488;InbreedingCoeff=0.9229;MQ=67.80;MQ0=2;MQRankSum=-5.479;QD=33.45;ReadPosRankSum=6.031;VQSLOD=6.4602;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,20:22:35.71:674,36,0	0/0:13,0:13:39.11:0,39,569	0/0:34,0:25:69.21:0,69,957	0/0:23,0:20:50.97:0,51,633	0/0:38,0:38:99:0,111,1609	0/0:36,0:36:99:0,99,1491	0/0:27,0:27:78.24:0,78,1145	0/0:37,0:37:99:0,102,1466	0/0:26,0:26:78.24:0,78,1143	1/1:3,18:21:60.19:1024,60,0	1/1:1,10:11:18.06:333,18,0	1/1:0,18:18:30.10:558,30,0	1/1:3,22:25:42.14:780,42,0	1/1:1,14:15:21.07:390,21,0	0/0:25,0:25:72.19:0,72,1016	0/1:4,17:21:3.73:652,0,4	1/1:0,21:21:30.10:552,30,0	1/1:1,15:16:12.16:594,12,0	0/0:9,0:9:27.06:0,27,365	0/0:44,0:44:99:0,123,1791	0/0:33,0:33:96.33:0,96,1468	1/1:3,25:28:42.14:778,42,0	1/1:1,10:11:15.05:277,15,0	1/1:2,13:15:27.09:505,27,0	1/1:0,6:6:6.02:112,6,0	1/1:2,28:30:84.11:1378,84,0	0/0:38,0:37:99:0,114,1698	1/1:0,4:4:12.04:224,12,0
chr10	31749207	.	G	GGAGCA	14446.60	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=0.918;DP=562;FS=6.854;HRun=0;HaplotypeScore=124.1956;InbreedingCoeff=0.9668;MQ=70.04;MQ0=0;MQRankSum=-17.409;QD=63.92;ReadPosRankSum=0.079;VQSLOD=5.8277;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,9:15:33.11:1020,33,0	0/0:10,0:10:30.10:0,30,652	0/0:19,0:19:44:0,44,971	0/0:22,0:22:61.01:0,61,1118	0/0:30,0:30:81.28:0,81,1743	0/0:24,0:24:69.23:0,69,1459	0/0:11,0:11:33.11:0,33,717	0/0:37,0:37:99:0,102,2151	0/0:22,0:22:63.19:0,63,1288	1/1:12,10:24:48.14:1388,48,0	1/1:3,14:17:39.13:1204,39,0	1/1:1,16:17:36.12:1138,36,0	1/1:4,11:16:39.13:1228,39,0	1/1:6,11:19:45.15:1355,45,0	0/0:32,0:32:96.33:0,96,2044	1/1:3,6:9:18.06:547,18,0	1/1:4,8:13:18.06:514,18,0	1/1:1,1:2:6.02:190,6,0	0/0:27,0:27:81.27:0,81,1708	0/0:33,0:33:96.30:0,96,2005	0/0:23,0:23:66.23:0,66,1400	1/1:7,15:23:42.14:1241,42,0	1/1:2,13:16:36.12:1137,36,0	1/1:1,4:6:6.02:190,6,0	1/1:5,13:19:42.14:1303,42,0	1/1:3,15:19:50.90:1519,51,0	0/0:46,0:45:99:0,132,2794	1/1:2,9:11:15.05:474,15,0
chr10	31749546	.	C	CT	6244.38	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=10.212;DP=510;FS=0.347;HRun=8;HaplotypeScore=76.1782;InbreedingCoeff=0.9979;MQ=82.54;MQ0=0;MQRankSum=-9.775;QD=28.64;ReadPosRankSum=3.020;VQSLOD=4.9170;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,18:21:48.10:539,48,0	0/0:8,0:8:24.01:0,24,220	0/0:22,0:23:52.52:0,53,445	0/0:25,0:26:24.97:0,25,461	0/0:23,0:23:60.03:0,60,549	0/0:37,0:37:99:0,102,934	0/0:15,0:15:35.98:0,36,319	0/0:30,0:30:80.07:0,80,716	0/0:15,0:15:33.01:0,33,302	1/1:5,11:16:39.04:421,39,0	1/1:3,9:12:24.07:277,24,0	1/1:2,8:10:24.07:277,24,0	1/1:1,9:10:27.08:312,27,0	1/1:1,13:14:39.12:450,39,0	0/0:17,0:17:45:0,45,407	1/1:2,11:13:33.10:381,33,0	1/1:1,17:18:51.15:587,51,0	1/1:0,14:14:42.12:484,42,0	0/0:24,1:25:28.40:0,28,514	0/0:30,0:30:84.04:0,84,769	0/0:17,0:17:48.02:0,48,439	1/1:2,14:16:42.12:484,42,0	1/1:3,13:15:39.07:435,39,0	1/1:0,11:11:27.08:311,27,0	1/1:4,14:18:45.09:504,45,0	1/1:2,16:18:48.12:541,48,0	0/0:26,0:26:75.04:0,75,686	1/1:2,8:10:21.06:241,21,0
chr10	31749805	.	G	GCAGA	28766.86	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-1.996;DP=560;FS=0.000;HRun=0;HaplotypeScore=143.7343;InbreedingCoeff=0.9306;MQ=76.13;MQ0=1;MQRankSum=-9.687;QD=59.81;ReadPosRankSum=2.778;VQSLOD=6.3809;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,12:20:21.07:565,21,0	1/1:2,8:10:21.07:566,21,0	0/0:24,0:24:52.42:0,52,942	0/0:26,0:26:72.12:0,72,1255	1/1:1,28:29:84.29:2264,84,0	1/1:1,24:25:72.25:1943,72,0	1/1:6,27:35:81.28:2184,81,0	1/1:13,14:25:57.18:1372,57,0	1/1:3,27:30:15.27:1804,15,0	1/1:7,14:21:54.14:1379,54,0	1/1:2,11:13:32.99:887,33,0	1/1:1,11:12:24.08:646,24,0	1/1:0,16:16:42.14:1106,42,0	1/1:7,10:17:27.09:726,27,0	0/0:28,0:28:78.26:0,78,1448	1/1:6,12:18:36.12:968,36,0	1/1:2,6:8:21.03:504,21,0	1/1:1,2:3:6.02:162,6,0	1/1:2,14:16:45.15:1182,45,0	1/1:3,28:31:84.29:2266,84,0	1/1:1,21:24:57.20:1538,57,0	1/1:9,11:20:33.11:885,33,0	1/1:5,8:13:18.06:484,18,0	1/1:2,6:7:12.04:322,12,0	1/1:8,13:21:36.12:968,36,0	1/1:4,13:17:45.15:1171,45,0	1/1:4,30:38:99:2613,99,0	1/1:2,5:7:12:262,12,0
chr10	31749882	.	GCAAC	G	12528.25	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=16.232;DP=566;FS=17.235;HRun=0;HaplotypeScore=156.6583;InbreedingCoeff=0.9903;MQ=59.74;MQ0=0;MQRankSum=-16.172;QD=43.50;ReadPosRankSum=2.558;VQSLOD=4.4040;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,37:40:78.27:1499,78,0	0/0:8,0:8:24.08:0,24,611	0/0:23,0:20:57.19:0,57,1446	0/0:17,0:17:45.15:0,45,1157	0/0:20,0:20:57.15:0,57,1497	0/0:21,0:21:63.22:0,63,1704	0/0:26,0:26:75.26:0,75,1986	0/0:16,0:16:48.16:0,48,1291	0/0:25,0:25:75.21:0,75,1802	1/1:2,21:23:54.19:1046,54,0	1/1:1,13:14:24.08:459,24,0	1/1:0,23:23:63.22:1219,63,0	1/1:2,18:20:48.16:921,48,0	1/1:0,17:17:45.15:866,45,0	0/0:29,0:29:87.26:0,87,2299	1/1:1,22:23:60.21:1162,60,0	1/1:1,15:16:39.13:755,39,0	1/1:0,9:9:9.03:174,9,0	0/0:15,0:15:42.14:0,42,1088	0/0:17,0:17:45.15:0,45,1233	0/0:42,0:42:99:0,117,3033	1/1:0,22:22:39.13:749,39,0	1/1:1,19:20:42.14:806,42,0	1/1:2,16:18:36.12:686,36,0	1/1:1,18:19:54.19:1026,54,0	1/1:2,16:18:42.14:813,42,0	0/0:19,0:19:45.14:0,45,1172	1/1:0,6:6:18.06:349,18,0
chr10	31750604	.	A	ACG	2275.81	PASS	AB=0.943;AC=23;AF=0.411;AN=56;BaseQRankSum=7.896;DP=717;FS=191.680;HRun=0;HaplotypeScore=227.0451;InbreedingCoeff=0.2764;MQ=36.97;MQ0=32;MQRankSum=-3.901;QD=5.58;ReadPosRankSum=-0.237;VQSLOD=-0.5946;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:41,4:42:36.99:390,37,0	0/0:7,0:6:6.36:0,6,49	0/0:23,0:13:36.09:0,36,392	0/0:19,0:14:23.27:0,23,313	0/0:26,0:21:13.13:0,13,89	0/0:26,0:23:9.91:0,10,118	0/1:44,0:36:5.24:5,0,214	0/0:26,0:17:47.88:0,48,408	0/0:28,0:25:1.11:0,1,137	0/1:26,1:21:50.98:187,0,51	0/1:23,3:23:6.64:123,0,7	0/1:29,3:29:11.13:194,0,11	0/1:15,2:16:42.69:162,0,43	0/1:14,1:14:3.69:76,0,4	0/0:33,0:29:21.41:0,21,197	0/1:20,2:18:6.18:192,0,6	1/1:23,0:20:2.31:121,2,0	1/1:18,1:16:0.29:125,0,0	0/0:13,0:8:20.89:0,21,164	0/0:34,0:29:36.52:0,37,297	0/0:52,0:41:22.97:0,23,203	1/1:27,4:31:11.63:281,12,0	1/1:19,0:15:15.40:157,15,0	1/1:43,0:39:10.58:150,11,0	0/1:14,0:12:9.01:41,0,9	0/1:25,1:21:32.49:130,0,32	0/0:22,0:19:33.97:0,34,218	1/1:3,1:4:8.98:122,9,0
chr10	31750643	.	A	AAC	2022.56	PASS	AB=0.980;AC=27;AF=0.482;AN=56;BaseQRankSum=8.182;DP=685;FS=2.299;HRun=0;HaplotypeScore=223.1554;InbreedingCoeff=0.4420;MQ=32.93;MQ0=67;MQRankSum=-3.022;QD=6.38;ReadPosRankSum=4.846;VQSLOD=3.0331;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:29,1:28:1.38:224,1,0	0/0:6,0:4:2.93:0,3,20	0/0:36,0:9:11.26:0,11,170	0/0:49,0:8:15.90:0,16,205	0/0:23,0:19:23.59:0,24,138	0/0:24,0:21:30.81:0,31,269	0/0:44,0:34:16.46:0,16,291	0/0:32,0:15:36.12:0,36,466	0/0:25,0:23:2.84:0,3,144	1/1:18,0:11:6.74:60,7,0	1/1:23,1:20:27.72:186,28,0	0/1:18,1:16:47.85:155,0,48	1/1:16,3:18:1.84:270,2,0	0/1:11,0:10:0.19:89,0,0	0/0:34,0:29:6.19:0,6,384	0/1:18,1:15:6.63:239,0,7	1/1:14,0:10:8.92:77,9,0	1/1:11,0:9:9.91:100,10,0	0/0:31,0:12:28.86:0,29,349	0/0:35,0:32:59.77:0,60,510	0/1:51,0:41:69.50:69,0,296	1/1:22,0:22:38.27:350,38,0	1/1:16,0:11:8.25:57,8,0	1/1:29,2:27:11.45:101,11,0	1/1:9,0:8:1.72:109,2,0	0/1:19,0:14:55.42:55,0,106	0/0:27,0:22:0.36:0,0,354	1/1:3,0:3:6.02:65,6,0
chr10	31750647	.	CACAAAT	C	877.22	PASS	AB=0.987;AC=25;AF=0.446;AN=56;BaseQRankSum=8.923;DP=675;FS=22.269;HRun=0;HaplotypeScore=240.4470;InbreedingCoeff=0.2439;MQ=34.51;MQ0=60;MQRankSum=-3.549;QD=2.52;ReadPosRankSum=3.083;VQSLOD=0.7763;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:27,1:27:0.72:207,1,0	0/0:5,0:4:2.29:0,2,66	0/0:40,0:9:22.26:0,22,442	0/0:51,0:10:22.53:0,23,403	0/0:20,1:18:29.51:0,30,459	0/0:21,0:19:27.55:0,28,717	0/0:44,0:34:33.33:0,33,729	0/0:30,0:16:35.13:0,35,872	0/1:26,0:23:5.07:5,0,466	1/1:15,0:11:7.18:39,7,0	1/1:24,0:20:6.80:47,7,0	0/1:19,0:16:8.32:8,0,59	0/1:18,0:17:60.36:60,0,129	0/1:10,1:10:37.81:66,0,38	0/1:36,0:31:12.14:12,0,566	0/1:18,0:14:33.44:33,0,105	0/1:14,0:10:12.51:17,0,13	1/1:10,0:8:6.55:39,7,0	0/0:32,0:14:17:0,17,750	0/0:34,0:33:62.49:0,62,1180	0/1:49,2:40:99:140,0,532	1/1:21,0:22:24.55:169,25,0	1/1:15,0:11:10.24:62,10,0	1/1:26,2:26:14.23:105,14,0	0/1:9,0:8:5.20:18,0,5	0/0:18,1:14:13.83:0,14,180	0/0:27,0:22:2.03:0,2,815	1/1:3,0:3:5.72:30,6,0
chr10	31750649	.	CAAAT	C	1941.85	PASS	AB=0.886;AC=25;AF=0.446;AN=56;BaseQRankSum=8.053;DP=667;FS=18.214;HRun=0;HaplotypeScore=227.2766;InbreedingCoeff=0.2523;MQ=34.59;MQ0=54;MQRankSum=-3.767;QD=5.80;ReadPosRankSum=0.925;VQSLOD=1.2938;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:22,6:27:3.98:297,4,0	0/0:3,1:3:2.30:0,2,65	0/0:45,0:10:27.13:0,27,472	0/0:56,0:12:25.84:0,26,462	0/0:22,0:19:23.12:0,23,434	0/1:21,0:19:9.25:9,0,686	0/0:40,3:34:35.93:0,36,782	0/0:27,0:15:36.59:0,37,874	0/0:22,1:21:12.10:0,12,493	1/1:11,1:11:9.53:105,10,0	1/1:19,5:20:17.25:202,17,0	0/1:13,5:16:8.85:110,0,9	0/1:15,2:17:99:108,0,117	0/1:6,3:10:28.81:118,0,29	0/1:34,1:31:15.17:15,0,606	0/1:13,3:14:89.88:90,0,91	0/1:8,4:10:20.17:52,0,20	1/1:8,1:8:3.03:98,3,0	0/0:28,1:15:15.58:0,16,746	0/0:39,0:36:31.99:0,32,1113	0/1:40,6:38:48.40:48,0,560	1/1:12,7:21:26.63:353,27,0	1/1:11,1:11:14.83:131,15,0	1/1:16,7:25:19.25:292,19,0	0/1:9,0:8:28.14:39,0,28	0/0:15,1:14:15.81:0,16,142	0/0:23,1:20:9.45:0,9,787	1/1:3,0:3:6.01:61,6,0
chr10	31750659	.	CAA	C	1619.54	PASS	AB=0.991;AC=24;AF=0.429;AN=56;BaseQRankSum=-1.978;DP=653;FS=2.758;HRun=3;HaplotypeScore=218.5887;InbreedingCoeff=-0.2005;MQ=38.89;MQ0=47;MQRankSum=-0.737;QD=3.60;ReadPosRankSum=1.189;VQSLOD=-0.1905;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:23,1:22:5.49:5,0,165	1/1:4,0:3:3.44:21,3,0	0/0:54,0:14:6.25:0,6,371	0/0:69,0:21:37.11:0,37,509	1/1:28,0:25:14:192,14,0	0/1:19,0:17:56.54:145,0,57	0/1:35,1:28:8.15:155,0,8	0/1:23,0:14:16.92:98,0,17	0/1:21,1:20:44.51:178,0,45	0/1:11,0:8:17.35:17,0,51	0/1:19,0:17:7.06:7,0,87	0/0:18,1:16:25.17:0,25,284	0/1:18,0:17:15.97:16,0,321	0/1:13,0:11:10.08:10,0,101	0/1:32,1:29:25.90:26,0,554	0/0:16,0:12:13.91:0,14,233	0/0:13,0:10:4.82:0,5,48	0/0:7,0:5:11.50:0,12,72	0/1:27,0:16:62.90:92,0,63	0/1:36,0:33:6.10:299,0,6	0/1:45,0:37:94.16:94,0,130	0/1:20,0:20:23.43:23,0,76	1/1:12,1:10:8.25:56,8,0	0/1:26,0:24:47.33:47,0,51	0/1:10,0:9:60.03:60,0,72	0/0:18,1:13:17.58:0,18,191	1/1:23,0:18:40.50:243,40,0	0/0:3,0:3:2.99:0,3,24
chr10	31750661	.	AAC	A	4058.89	PASS	AB=0.881;AC=20;AF=0.357;AN=56;BaseQRankSum=-5.204;DP=644;FS=20.649;HRun=0;HaplotypeScore=207.4393;InbreedingCoeff=0.3213;MQ=39.29;MQ0=43;MQRankSum=0.240;QD=11.66;ReadPosRankSum=-0.136;VQSLOD=1.9940;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:10.62:0,11,188	1/1:2,1:3:3.48:41,3,0	0/0:58,0:16:2.70:0,3,329	0/0:70,0:22:10.39:0,10,516	1/1:11,15:23:40.36:512,40,0	1/1:11,10:19:5.52:372,6,0	1/1:22,11:26:42.01:484,42,0	1/1:16,6:13:24:317,24,0	0/1:13,9:20:3.76:346,0,4	0/0:10,0:8:9.73:0,10,65	0/0:16,0:15:10.59:0,11,111	0/0:19,0:16:21.34:0,21,223	0/0:17,0:17:22.13:0,22,246	0/0:12,0:11:6.35:0,6,64	0/1:30,3:29:99:104,0,482	0/0:16,0:12:23.15:0,23,242	0/0:10,0:9:4.83:0,5,43	0/0:7,0:5:5.37:0,5,50	0/1:24,3:16:29.63:293,0,30	0/1:17,21:35:4.05:759,0,4	0/1:37,6:36:48.50:288,0,48	0/1:19,0:19:7.80:8,0,72	0/1:10,0:8:5.44:14,0,5	0/1:24,0:24:0.15:0,0,104	0/0:11,0:10:4.66:0,5,99	0/0:17,0:12:13.34:0,13,127	1/1:9,15:19:36.05:522,36,0	0/0:2,0:2:1.55:0,2,4
chr10	31750671	.	AAC	A	912.11	PASS	AB=0.959;AC=23;AF=0.411;AN=56;BaseQRankSum=4.933;DP=626;FS=15.663;HRun=0;HaplotypeScore=229.5491;InbreedingCoeff=-0.1719;MQ=40.66;MQ0=24;MQRankSum=-5.308;QD=2.73;ReadPosRankSum=4.594;VQSLOD=0.8982;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:20,1:19:58.76:82,0,59	0/0:4,0:4:1.90:0,2,21	0/0:54,0:16:17.61:0,18,393	0/0:67,0:27:55.36:0,55,713	0/0:27,0:25:2.72:0,3,207	0/0:21,0:19:2.68:0,3,110	0/0:28,0:22:5.07:0,5,116	0/0:16,0:10:13.54:0,14,60	0/0:21,0:20:1.67:0,2,128	0/1:10,0:8:27.31:27,0,43	0/1:16,1:15:38.01:157,0,38	0/1:20,1:18:17.65:96,0,18	0/1:15,3:18:81.54:113,0,82	1/1:11,1:10:3.10:84,3,0	0/0:34,0:30:42.69:0,43,709	0/1:18,0:14:51.63:52,0,81	1/1:12,0:9:1.36:3,1,0	1/1:6,0:5:3.01:35,3,0	0/0:19,0:12:12.73:0,13,122	0/1:34,1:35:8.80:9,0,301	0/1:41,1:37:17.81:18,0,61	0/1:21,3:24:41.35:166,0,41	1/1:9,0:8:7.94:48,8,0	0/1:25,0:24:17.93:37,0,18	0/1:12,0:12:2.39:2,0,189	0/1:18,2:14:58.72:74,0,59	0/1:25,0:20:26.45:26,0,98	1/1:2,1:3:3:36,3,0
chr10	31750675	.	C	CAT	245.95	PASS	AB=0.988;AC=11;AF=0.196;AN=56;BaseQRankSum=5.186;DP=621;FS=5.402;HRun=0;HaplotypeScore=238.5038;InbreedingCoeff=-0.0790;MQ=43.69;MQ0=20;MQRankSum=-4.069;QD=1.46;ReadPosRankSum=-0.689;VQSLOD=2.2331;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:17:2.86:0,3,129	0/0:5,0:5:6.91:0,7,87	0/0:52,1:20:19.09:0,19,416	0/0:65,0:28:62.27:0,62,736	0/0:29,0:27:54.76:0,55,756	0/0:20,0:18:39.81:0,40,498	0/0:28,0:24:42.12:0,42,567	0/0:13,0:8:20.92:0,21,247	0/0:22,0:21:36.35:0,36,439	0/1:12,0:10:2.84:3,0,71	0/1:18,0:16:45.66:46,0,55	0/1:18,0:15:43.98:44,0,56	0/1:17,1:18:30.53:31,0,198	0/1:13,0:11:21.38:21,0,75	0/0:31,2:29:54.05:0,54,725	0/1:17,1:14:11.44:11,0,128	0/0:12,0:9:2.96:0,3,19	0/0:6,0:5:3.44:0,3,21	0/0:17,0:11:26.71:0,27,301	0/0:35,0:35:81.15:0,81,1073	0/0:46,0:40:35.11:0,35,369	0/1:23,0:23:60.33:108,0,60	1/1:9,0:7:5.86:54,6,0	0/1:25,0:24:0.51:1,0,46	0/1:14,0:13:63.87:64,0,138	0/0:22,0:16:19.84:0,20,153	0/0:26,0:20:18.77:0,19,545	0/0:2,0:2:2.94:0,3,18
chr10	31750679	.	CAG	C	2669.21	PASS	AB=0.922;AC=31;AF=0.554;AN=56;BaseQRankSum=2.847;DP=594;FS=42.143;HRun=0;HaplotypeScore=220.6257;InbreedingCoeff=-0.3962;MQ=47.28;MQ0=15;MQRankSum=-5.701;QD=5.93;ReadPosRankSum=-0.202;VQSLOD=1.7345;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:17,1:16:15.10:94,0,15	1/1:6,0:6:7.21:48,7,0	0/0:52,0:23:20.95:0,21,478	0/0:59,0:28:58.88:0,59,826	0/1:27,2:28:29.39:230,0,29	0/1:18,0:17:10.42:148,0,10	1/1:25,3:26:5.50:248,5,0	0/1:13,0:10:5.78:58,0,6	0/1:18,2:19:23.04:150,0,23	0/1:11,1:10:42.59:59,0,43	0/1:10,5:13:53.56:119,0,54	0/1:15,2:15:17.33:150,0,17	0/1:18,0:19:89.25:89,0,129	1/1:13,0:11:3.73:82,4,0	0/0:31,2:29:30.59:0,31,803	0/1:15,1:13:58.46:88,0,58	1/1:11,2:10:4.22:24,4,0	1/1:4,1:4:5.99:59,6,0	0/1:15,0:10:57.96:91,0,58	0/1:32,0:32:85.44:340,0,85	1/1:35,9:41:2.03:146,2,0	0/1:18,4:22:50.74:167,0,51	0/1:7,1:6:6.52:23,0,7	0/1:16,4:21:16.90:63,0,17	0/1:13,0:12:23.26:23,0,236	0/1:19,3:16:93.54:94,0,124	0/1:23,2:19:0.19:223,0,0	0/1:2,0:2:11.59:12,0,13
chr10	31750682	.	AAACACACAG	A	3894.59	PASS	AB=1.000;AC=39;AF=0.696;AN=56;BaseQRankSum=1.137;DP=573;FS=38.560;HRun=0;HaplotypeScore=256.1961;InbreedingCoeff=0.2681;MQ=48.40;MQ0=12;MQRankSum=-2.446;QD=9.36;ReadPosRankSum=-4.081;VQSLOD=1.1084;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:15:11.51:100,12,0	1/1:6,0:6:10.97:78,11,0	0/0:50,0:24:49.56:0,50,812	0/0:56,0:28:49.15:0,49,650	1/1:29,0:28:34.66:307,35,0	0/1:16,0:15:20.72:57,0,21	1/1:27,0:25:46.93:428,47,0	1/1:5,6:10:15.02:193,15,0	1/1:20,0:19:7.60:164,8,0	0/1:11,0:11:24.51:158,0,25	1/1:13,0:12:19.45:107,19,0	1/1:18,0:15:23.62:181,24,0	0/0:17,0:17:1.11:0,1,73	1/1:13,0:11:9.40:75,9,0	0/0:31,0:27:39.06:0,39,1357	1/1:17,0:14:23.60:183,24,0	1/1:13,0:10:3.45:23,3,0	1/1:4,0:3:6.01:65,6,0	1/1:14,0:10:5.41:175,5,0	1/1:35,0:35:14.82:393,15,0	1/1:46,0:42:66.70:513,67,0	0/1:20,0:20:10.90:164,0,11	0/1:6,0:5:6.74:18,0,7	1/1:20,0:20:14.37:70,14,0	0/1:14,0:13:24.65:86,0,25	0/1:21,0:15:99:124,0,111	0/1:25,0:19:20.76:233,0,21	0/0:2,0:2:3.01:0,3,33
chr10	31750690	.	AG	A	1010.18	PASS	AB=0.926;AC=26;AF=0.464;AN=56;BaseQRankSum=7.102;DP=517;FS=5.522;HRun=1;HaplotypeScore=201.6446;InbreedingCoeff=-0.2504;MQ=54.95;MQ0=6;MQRankSum=-8.132;QD=3.06;ReadPosRankSum=2.019;VQSLOD=0.0444;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:12,1:12:14.67:77,0,15	0/0:5,0:5:2.55:0,3,27	0/0:45,0:23:61.39:0,61,784	0/0:54,0:31:60.98:0,61,837	0/1:29,2:31:66.79:67,0,109	0/0:14,1:15:8.94:0,9,140	0/0:27,0:26:7.11:0,7,174	0/1:8,1:7:17.86:60,0,18	0/1:16,1:17:22.70:54,0,23	0/1:10,0:10:4.03:4,0,32	1/1:11,0:11:8.74:57,9,0	0/1:17,0:15:19.31:19,0,20	0/1:13,1:14:15.80:16,0,41	1/1:9,1:8:14.99:94,15,0	0/0:24,2:22:48.15:0,48,746	0/1:12,2:13:31.84:66,0,32	0/0:9,0:7:1.41:0,1,9	1/1:3,0:4:2.33:33,2,0	0/1:12,1:10:31.66:32,0,41	0/1:32,4:36:99:198,0,160	0/1:33,6:36:86.09:86,0,99	0/1:15,1:16:32.69:55,0,33	1/1:5,0:5:4.05:13,4,0	0/1:9,2:14:24.26:24,0,30	0/1:12,1:13:7.84:89,0,8	0/1:14,3:12:28.35:28,0,43	0/1:25,0:20:5.21:93,0,5	1/1:1,0:1:1.25:3,1,0
chr10	31750691	.	G	GA	8428.06	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=4.575;DP=520;FS=19.074;HRun=2;HaplotypeScore=180.6275;InbreedingCoeff=0.7585;MQ=54.82;MQ0=6;MQRankSum=-4.367;QD=21.45;ReadPosRankSum=0.745;VQSLOD=2.8643;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,6:13:17.84:206,18,0	1/1:1,4:5:11.82:172,12,0	0/0:47,0:23:55.56:0,56,637	0/0:54,0:30:37.77:0,38,555	1/1:6,27:32:68.44:944,68,0	1/1:5,10:15:21.06:287,21,0	1/1:3,24:26:48.16:690,48,0	1/1:10,0:8:15.05:215,15,0	1/1:4,14:18:42:559,42,0	1/1:5,7:12:29.75:328,30,0	1/1:6,4:10:21.95:202,22,0	1/1:9,9:16:23.59:296,24,0	1/1:13,0:14:1.89:3,2,0	1/1:6,4:8:12.38:146,12,0	0/0:24,0:20:45.04:0,45,557	1/1:5,8:12:27.05:340,27,0	1/1:6,3:7:3.35:44,3,0	1/1:1,3:4:6.02:83,6,0	1/1:3,10:10:27.98:386,28,0	1/1:8,27:35:77.93:1132,78,0	1/1:14,26:37:64.35:854,64,0	1/1:8,9:17:31.02:385,31,0	1/1:3,1:4:3.48:40,3,0	1/1:8,6:14:9.87:78,10,0	1/1:8,5:13:17.28:162,17,0	1/1:13,4:12:13.91:158,14,0	1/1:5,21:22:53.72:716,54,0	1/1:1,0:1:0.47:1,0,0
chr10	31750692	.	A	AT	3422.94	PASS	AB=0.968;AC=33;AF=0.589;AN=56;BaseQRankSum=0.341;DP=523;FS=27.412;HRun=0;HaplotypeScore=198.4966;InbreedingCoeff=0.0846;MQ=54.72;MQ0=6;MQRankSum=-0.281;QD=9.01;ReadPosRankSum=4.202;VQSLOD=2.2302;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:12:9.84:72,10,0	1/1:4,0:5:11.62:86,12,0	0/0:46,0:23:54:0,54,715	0/0:57,0:31:49.66:0,50,629	1/1:33,0:32:12.29:384,12,0	0/1:14,1:15:65.06:128,0,65	0/1:26,0:25:3.68:267,0,4	0/1:9,0:7:8.10:78,0,8	1/1:17,1:18:3.88:253,4,0	0/1:13,0:13:12.85:92,0,13	0/1:10,0:10:2.13:55,0,2	1/1:16,0:16:19.97:127,20,0	0/0:14,1:15:17.60:0,18,106	0/1:9,0:8:3.88:51,0,4	0/0:22,2:20:48.12:0,48,649	1/1:13,0:12:26.10:172,26,0	0/1:9,0:8:9.23:16,0,9	1/1:4,0:4:5.93:40,6,0	1/1:13,0:10:26.64:185,27,0	0/1:34,0:35:10.51:473,0,11	1/1:38,0:37:19.34:349,19,0	0/1:18,0:18:18.46:143,0,18	0/1:3,0:3:8.27:14,0,8	0/1:15,0:15:2.38:11,0,2	0/1:13,0:13:37.40:37,0,96	0/1:15,0:12:45.24:45,0,67	1/1:27,0:23:49.48:345,49,0	0/0:1,0:1:2.96:0,3,19
chr10	31750774	.	C	CAT	2965.47	PASS	AB=0.949;AC=21;AF=0.389;AN=54;BaseQRankSum=-4.426;DP=1071;FS=78.382;HRun=0;HaplotypeScore=236.0638;InbreedingCoeff=-0.6487;MQ=25.00;MQ0=203;MQRankSum=2.453;QD=3.26;ReadPosRankSum=1.216;VQSLOD=-0.0957;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:48,0:32:50.95:51,0,113	0/1:9,5:12:99:263,0,100	./.	0/0:14,0:1:3.01:0,3,38	0/1:44,4:32:99:333,0,343	0/1:20,2:17:41.86:42,0,149	0/1:44,6:28:99:269,0,182	0/1:59,0:6:9.11:9,0,134	0/1:35,5:32:99:341,0,221	0/1:51,0:30:42.29:42,0,276	0/1:27,0:16:33.67:34,0,137	0/1:38,0:26:73.53:74,0,194	0/1:46,0:33:97.65:98,0,99	0/1:37,0:23:18.87:19,0,117	0/0:52,0:29:35.72:0,36,318	0/1:33,0:21:30.92:31,0,89	0/0:38,0:24:10.79:0,11,227	0/0:15,0:8:6.01:0,6,68	0/1:37,3:12:99:242,0,114	0/1:34,4:29:99:365,0,323	0/1:110,7:63:99:346,0,163	0/1:40,0:34:89.14:89,0,132	0/1:32,0:24:22.74:23,0,170	0/1:39,0:24:3.05:3,0,53	0/1:37,0:28:17.66:18,0,266	0/0:29,0:16:35.85:0,36,328	0/1:39,11:31:99:426,0,121	0/0:8,0:6:8.94:0,9,94
chr10	31750778	.	A	AAC	2972.28	PASS	AB=0.948;AC=24;AF=0.462;AN=52;BaseQRankSum=-1.579;DP=1089;FS=1.930;HRun=0;HaplotypeScore=241.4566;InbreedingCoeff=-0.7229;MQ=24.20;MQ0=213;MQRankSum=0.343;QD=3.06;ReadPosRankSum=4.297;VQSLOD=2.5626;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:41,5:32:88.78:206,0,89	0/1:12,0:10:54.16:181,0,54	./.	./.	0/1:50,0:32:99:161,0,274	0/1:22,0:17:13.71:14,0,184	0/1:55,0:30:99:183,0,109	0/0:65,0:5:12.04:0,12,150	0/1:36,0:30:99:206,0,185	0/1:51,3:30:99:102,0,205	0/1:25,2:18:54:128,0,54	0/1:34,2:26:7.04:258,0,7	0/1:38,1:32:87.89:107,0,88	0/1:32,2:21:5.20:143,0,5	0/1:54,0:32:37.26:37,0,161	0/1:26,1:17:11.63:112,0,12	0/1:32,3:24:39.67:40,0,104	1/1:14,1:8:2.04:6,2,0	0/1:38,0:12:68.69:147,0,69	0/1:38,0:27:99:188,0,268	0/1:115,1:64:99:170,0,195	0/1:34,2:35:99:148,0,101	0/1:30,1:25:57.87:77,0,58	0/1:35,4:24:59.62:60,0,71	0/1:31,4:29:99:167,0,176	0/0:30,1:16:15.77:0,16,136	0/1:48,0:30:99:276,0,131	0/0:7,0:5:2.08:0,2,65
chr10	31750812	.	AAC	A	1780.39	PASS	AB=0.925;AC=22;AF=0.440;AN=50;BaseQRankSum=0.567;DP=1198;FS=20.264;HRun=0;HaplotypeScore=224.7274;InbreedingCoeff=-0.5839;MQ=20.19;MQ0=274;MQRankSum=0.924;QD=1.81;ReadPosRankSum=5.563;VQSLOD=1.0715;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:57,0:38:32.60:33,0,146	0/1:13,2:11:24.34:87,0,24	./.	./.	1/1:21,12:15:17.05:180,17,0	0/1:19,6:18:36.95:91,0,37	0/1:48,6:24:30.58:31,0,51	./.	0/1:33,8:29:99:138,0,196	0/1:62,0:26:25.88:26,0,149	0/0:33,0:20:3.23:0,3,66	0/1:52,0:30:31.17:31,0,140	0/1:51,0:29:37.59:38,0,121	0/0:45,0:26:24.01:0,24,323	0/1:57,9:34:73.79:161,0,74	0/0:45,0:27:13.25:0,13,368	0/1:49,0:31:51.40:51,0,52	0/1:19,0:8:18.74:19,0,75	0/1:26,5:7:59.18:118,0,59	0/1:23,13:23:90.35:297,0,90	0/1:106,29:57:78.30:319,0,78	0/1:41,0:31:6.74:7,0,181	0/1:32,0:21:0.21:60,0,0	0/1:55,1:40:12.81:13,0,266	0/1:37,0:27:15.38:15,0,105	0/1:46,0:20:4.94:5,0,219	0/1:30,11:22:53.60:205,0,54	0/0:7,0:6:5.41:0,5,70
chr10	31750822	.	CAT	C	1104.44	PASS	AB=0.977;AC=22;AF=0.423;AN=52;BaseQRankSum=2.318;DP=1156;FS=56.789;HRun=0;HaplotypeScore=199.9349;InbreedingCoeff=-0.5501;MQ=19.79;MQ0=283;MQRankSum=-2.277;QD=1.24;ReadPosRankSum=1.528;VQSLOD=1.1197;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:51,1:34:63.97:64,0,179	0/1:11,1:8:40.62:51,0,41	./.	./.	1/1:30,0:14:15.34:87,15,0	0/1:23,0:16:36.20:36,0,79	0/1:54,0:23:20.58:21,0,44	0/0:85,0:3:2.74:0,3,12	0/1:41,1:29:67.20:67,0,182	0/1:63,1:27:49.66:50,0,138	0/1:27,1:16:20.07:20,0,94	0/1:52,0:29:55.38:55,0,159	0/1:48,2:29:36.80:37,0,136	0/0:40,0:22:9.10:0,9,405	0/1:70,1:39:38.47:38,0,149	0/0:42,1:25:30.37:0,30,497	0/1:43,1:26:3.96:4,0,81	0/1:19,1:8:38.85:39,0,102	0/1:35,0:6:45.82:46,0,93	0/1:36,0:23:99:147,0,118	0/1:132,1:56:99:185,0,128	0/1:38,1:29:63.22:63,0,195	0/1:29,1:18:0.45:86,0,0	0/0:48,0:36:21.46:0,21,304	0/1:31,3:24:59.06:59,0,145	0/0:43,0:20:5.43:0,5,351	0/1:36,0:19:87.74:88,0,124	0/1:7,0:6:11.10:11,0,60
chr10	31750846	.	AAC	A	229.30	PASS	AB=0.962;AC=16;AF=0.308;AN=52;BaseQRankSum=3.358;DP=1111;FS=8.037;HRun=0;HaplotypeScore=196.9956;InbreedingCoeff=-0.3065;MQ=20.84;MQ0=272;MQRankSum=-1.505;QD=0.41;ReadPosRankSum=-3.354;VQSLOD=0.8214;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:39:1.77:0,2,319	0/1:13,0:7:13.89:14,0,34	./.	./.	1/1:26,0:16:4.91:21,5,0	0/1:18,1:12:14.26:14,0,123	0/0:39,0:17:0.56:0,1,2	0/0:85,0:7:10.27:0,10,107	0/1:35,1:24:0.69:1,0,130	0/0:53,0:27:8:0,8,216	0/1:32,1:21:36.42:36,0,107	0/0:51,0:28:14.30:0,14,385	0/1:47,1:30:9.22:9,0,412	0/0:38,0:19:29.96:0,30,367	0/0:77,0:48:53.08:0,53,1020	0/1:45,1:26:8.49:8,0,528	0/1:42,3:28:42.65:43,0,109	0/1:21,0:8:6.87:7,0,67	0/1:26,0:8:25.36:25,0,104	0/1:30,0:20:41.28:41,0,157	0/1:112,9:52:54.40:54,0,185	0/0:46,0:33:25.97:0,26,397	0/1:29,0:18:34.96:35,0,110	0/0:48,1:36:11.36:0,11,237	0/1:31,1:21:24.39:24,0,173	0/0:43,0:25:2.69:0,3,525	0/1:23,3:13:36.68:37,0,159	0/0:8,0:6:5.97:0,6,62
chr10	31750848	.	C	CAG	177.55	PASS	AB=0.968;AC=8;AF=0.154;AN=52;BaseQRankSum=-3.257;DP=1116;FS=2.417;HRun=0;HaplotypeScore=198.3967;InbreedingCoeff=-0.0107;MQ=20.79;MQ0=279;MQRankSum=-0.034;QD=0.52;ReadPosRankSum=-2.020;VQSLOD=2.2741;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:56,3:39:17.14:17,0,175	0/0:12,0:7:4.72:0,5,21	./.	./.	0/0:24,0:14:6.81:0,7,43	0/0:20,0:12:14.16:0,14,129	1/1:43,0:19:2.78:18,3,0	0/0:84,0:7:11.53:0,12,137	0/0:37,0:24:20.95:0,21,255	0/0:52,0:26:38.51:0,39,325	0/0:32,0:21:26.19:0,26,196	0/1:50,1:28:22.79:23,0,179	0/1:48,2:30:99:102,0,210	0/1:38,1:19:38.20:38,0,44	0/0:77,0:48:78.60:0,79,1091	0/0:45,0:26:40.33:0,40,252	0/1:47,1:28:34.90:35,0,112	0/0:24,0:9:8.88:0,9,38	0/0:26,0:8:14.25:0,14,96	0/0:29,0:19:22.14:0,22,202	0/0:124,0:52:40.27:0,40,346	0/0:44,0:31:42.31:0,42,381	0/0:29,0:18:21.19:0,21,210	0/1:48,2:36:73.21:73,0,318	0/0:33,0:22:18.90:0,19,199	0/0:47,0:27:50.14:0,50,414	0/0:26,0:13:20.86:0,21,135	0/0:8,0:6:8.13:0,8,40
chr10	31750860	.	A	AAC	3163.26	PASS	AB=0.928;AC=21;AF=0.404;AN=52;BaseQRankSum=-3.012;DP=1043;FS=48.492;HRun=0;HaplotypeScore=182.1703;InbreedingCoeff=-0.5282;MQ=21.97;MQ0=268;MQRankSum=-1.288;QD=4.74;ReadPosRankSum=6.617;VQSLOD=0.8142;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:43,6:31:99:374,0,126	0/1:10,1:7:32.77:42,0,33	./.	./.	0/1:18,1:13:19.61:20,0,32	0/1:18,2:12:75.15:77,0,75	0/0:42,0:16:1.25:0,1,3	0/0:76,0:7:8.97:0,9,70	0/0:37,0:25:17.81:0,18,207	0/1:52,1:25:45.03:156,0,45	0/0:33,0:24:3.46:0,3,78	0/1:44,3:26:26.74:269,0,27	0/1:46,2:31:57.93:281,0,58	1/1:28,6:17:26.64:421,27,0	0/0:73,1:49:48.43:0,48,942	0/1:37,8:28:99:449,0,111	0/1:40,1:25:59.42:59,0,71	0/1:21,2:10:3.92:93,0,4	0/1:26,2:9:46.79:90,0,47	0/1:19,3:16:80.74:81,0,94	0/0:103,5:52:10.17:0,10,434	0/1:41,1:31:99:162,0,254	0/1:26,0:16:22.27:93,0,22	0/1:39,5:33:46.65:73,0,47	0/1:36,1:23:49.49:49,0,87	0/1:40,5:26:99:349,0,148	0/1:23,2:14:37.01:131,0,37	0/1:5,1:5:14.91:45,0,15
chr10	31750924	.	CACACAT	C	384.89	PASS	AB=0.994;AC=11;AF=0.212;AN=52;BaseQRankSum=8.465;DP=1545;FS=5.504;HRun=0;HaplotypeScore=380.9785;InbreedingCoeff=-0.0558;MQ=25.83;MQ0=267;MQRankSum=-4.687;QD=0.97;ReadPosRankSum=-7.737;VQSLOD=-0.5474;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:50,0:29:14.94:15,0,202	0/0:27,0:21:40.23:0,40,920	./.	./.	0/0:52,0:43:77.68:0,78,1970	0/1:37,0:28:2.21:2,0,1071	0/0:107,0:52:66.74:0,67,1687	0/0:192,0:73:99:0,193,5055	0/0:48,3:36:10.47:0,10,1325	0/0:82,0:51:60.68:0,61,1092	0/0:50,0:44:10.24:0,10,470	0/0:52,1:35:29.17:0,29,370	0/1:42,0:32:89.84:90,0,202	0/1:42,0:30:51.35:51,0,267	0/0:67,2:36:16.94:0,17,1170	0/1:43,0:29:99:160,0,223	0/1:33,1:21:56.79:57,0,133	0/1:19,0:7:20.73:21,0,226	0/0:78,0:30:68.77:0,69,1371	0/0:66,0:56:99:0,120,3245	0/0:149,1:94:43.74:0,44,2830	0/1:44,1:42:1.05:1,0,305	0/0:26,0:24:19.46:0,19,311	1/1:34,0:19:5.48:31,5,0	0/0:60,0:46:44.30:0,44,683	0/1:49,0:32:92.14:92,0,631	0/0:49,0:41:28.61:0,29,1921	0/0:17,0:15:8.92:0,9,156
chr10	31750927	.	AC	A	387.66	PASS	AB=0.882;AC=13;AF=0.250;AN=52;BaseQRankSum=6.971;DP=1525;FS=87.188;HRun=1;HaplotypeScore=331.0577;InbreedingCoeff=-0.3021;MQ=26.10;MQ0=266;MQRankSum=-3.698;QD=0.68;ReadPosRankSum=4.690;VQSLOD=-0.4787;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:42,5:26:6.21:6,0,181	0/0:27,0:21:45.14:0,45,685	./.	./.	0/0:51,0:42:71.39:0,71,1146	0/0:36,0:28:35.53:0,36,622	0/0:108,0:55:68.97:0,69,1082	0/0:201,0:76:99:0,199,3098	0/0:49,0:35:52.19:0,52,792	0/1:71,10:50:45.33:45,0,797	0/1:42,7:43:2.68:3,0,479	0/1:42,7:35:97.48:97,0,140	0/1:36,2:30:3.01:3,0,276	0/1:35,4:29:39.06:39,0,219	0/0:68,0:37:53.45:0,53,799	0/1:35,4:26:50.62:51,0,209	0/1:32,1:20:11.52:12,0,96	0/0:17,0:7:15.03:0,15,196	0/0:75,0:29:81.01:0,81,1191	0/0:66,0:56:99:0,120,1840	0/0:148,0:94:99:0,105,1617	0/1:40,4:40:9.46:9,0,509	0/1:21,4:23:35.93:36,0,213	0/0:33,0:18:7.67:0,8,22	0/1:50,9:45:98.89:99,0,434	0/1:45,3:33:13.74:14,0,571	0/0:49,0:41:74.31:0,74,1084	0/1:9,7:14:87.94:115,0,88
chr10	31750928	.	CAT	C	2746.75	PASS	AB=0.978;AC=15;AF=0.288;AN=52;BaseQRankSum=10.697;DP=1516;FS=29.520;HRun=0;HaplotypeScore=327.5134;InbreedingCoeff=-0.3111;MQ=26.10;MQ0=265;MQRankSum=-5.063;QD=4.59;ReadPosRankSum=2.398;VQSLOD=1.7745;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:41,3:25:75.17:84,0,75	0/0:27,0:21:36.14:0,36,623	./.	./.	0/0:51,0:42:49.55:0,50,1197	0/0:36,0:28:0.92:0,1,660	0/0:106,0:55:66.91:0,67,1203	0/0:200,0:76:99:0,195,3354	0/0:49,0:35:10.12:0,10,807	0/1:80,0:50:99:320,0,423	0/1:44,5:43:99:176,0,251	0/1:48,2:35:35.65:378,0,36	0/1:36,0:29:99:158,0,100	0/1:38,1:29:99:183,0,140	0/0:67,1:37:26.71:0,27,795	0/1:35,1:25:60.80:209,0,61	0/1:32,1:20:48.57:95,0,49	0/0:16,1:7:14.88:0,15,174	0/0:75,1:29:19.10:0,19,902	0/0:67,0:56:99:0,106,2002	0/0:147,0:92:85.35:0,85,1825	0/1:44,0:40:99:177,0,122	0/1:25,0:23:99:149,0,192	1/1:29,1:17:0.65:9,1,0	0/1:57,1:45:99:453,0,168	0/1:46,0:33:99:233,0,275	0/0:48,1:41:42.08:0,42,1176	0/1:16,0:14:23.22:271,0,23
chr10	31750972	.	C	CATAAAAAC	7003.63	PASS	AB=0.993;AC=18;AF=0.321;AN=56;BaseQRankSum=-4.215;DP=1236;FS=65.394;HRun=0;HaplotypeScore=308.1731;InbreedingCoeff=-0.0214;MQ=28.82;MQ0=162;MQRankSum=-7.487;QD=12.51;ReadPosRankSum=-4.479;VQSLOD=0.8561;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:43,0:28:48.48:196,0,48	0/0:19,0:17:21.28:0,21,276	0/0:8,0:3:3.01:0,3,71	0/0:11,0:3:3.01:0,3,71	0/0:51,0:46:38.18:0,38,549	0/0:27,0:23:19.59:0,20,238	0/0:70,0:41:29.46:0,29,404	0/0:118,0:25:31.64:0,32,686	0/0:46,0:38:39.19:0,39,495	0/1:58,0:41:99:618,0,388	0/1:27,0:23:34.53:298,0,35	0/1:44,0:34:99:585,0,178	0/1:36,0:31:41.81:445,0,42	0/1:34,0:26:14.56:342,0,15	0/0:54,0:29:32.24:0,32,428	0/1:37,0:27:81.87:553,0,82	0/1:47,0:38:53.31:756,0,53	0/1:25,0:16:99:180,0,172	0/0:35,0:20:23.36:0,23,403	0/0:74,0:65:59.14:0,59,909	0/0:116,0:71:28.71:0,29,358	0/1:32,0:29:51.48:353,0,51	1/1:16,7:25:16.60:348,17,0	1/1:30,0:22:17.14:262,17,0	1/1:49,0:40:18.56:1148,19,0	0/1:44,0:35:99:635,0,405	0/0:47,0:43:67.39:0,67,718	0/1:24,0:23:99:283,0,299
chr10	31751222	.	T	TA	10505	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=17.808;DP=658;FS=2.956;HRun=0;HaplotypeScore=100.4936;InbreedingCoeff=0.9980;MQ=83.73;MQ0=0;MQRankSum=-4.311;QD=31.26;ReadPosRankSum=7.783;VQSLOD=4.2321;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,38:38:93.30:1173,93,0	0/0:6,0:6:18.02:0,18,230	0/0:23,0:23:51.16:0,51,785	0/0:25,0:25:55.50:0,56,676	0/0:23,0:23:54.08:0,54,652	0/0:21,0:21:63.19:0,63,849	0/0:33,0:33:99:0,99,1332	0/0:24,0:24:66.22:0,66,923	0/0:30,0:30:87.29:0,87,1216	1/1:4,13:17:25.81:436,26,0	1/1:0,9:9:21.07:272,21,0	1/1:2,18:20:57.01:695,57,0	1/1:2,22:24:56.23:733,56,0	1/1:1,19:20:39.12:493,39,0	0/0:32,0:32:90.29:0,90,1242	1/1:0,10:10:30.10:386,30,0	1/1:3,35:38:95.01:1211,95,0	1/1:2,15:17:46.96:569,47,0	0/0:25,0:25:75.23:0,75,1017	0/0:25,0:25:66.07:0,66,817	0/0:28,0:28:81.27:0,81,1131	1/1:2,23:26:59.06:766,59,0	1/1:1,17:19:45:572,45,0	1/1:1,32:33:81.17:991,81,0	1/1:0,19:19:45.15:576,45,0	1/1:3,28:31:86.03:1100,86,0	0/0:27,0:27:78.24:0,78,1058	1/1:0,15:15:42.13:531,42,0
chr10	31752732	.	C	CAGGG	14157.70	PASS	AB=0.920;AC=51;AF=0.911;AN=56;BaseQRankSum=-6.047;DP=489;FS=41.260;HRun=0;HaplotypeScore=53.8903;InbreedingCoeff=0.6240;MQ=58.64;MQ0=50;MQRankSum=-1.506;QD=32.47;ReadPosRankSum=4.269;VQSLOD=2.9074;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,22:25:45.15:1258,45,0	1/1:2,4:5:9.03:226,9,0	0/0:27,0:24:69.23:0,69,1281	0/0:26,0:26:66.16:0,66,1063	1/1:5,25:19:42.14:1174,42,0	1/1:1,9:5:6.02:168,6,0	1/1:6,14:11:15.05:394,15,0	1/1:8,1:5:9:188,9,0	1/1:4,10:9:21.07:562,21,0	1/1:3,6:5:12.04:289,12,0	1/1:1,14:12:12.04:336,12,0	1/1:6,11:11:21.07:455,21,0	1/1:2,11:7:18.06:459,18,0	1/1:5,19:14:30.10:835,30,0	0/1:21,2:23:99:101,0,1122	1/1:5,13:11:27.09:669,27,0	1/1:4,15:16:24.08:664,24,0	1/1:2,9:7:18.06:503,18,0	1/1:7,10:10:24.08:661,24,0	1/1:4,19:14:24.08:669,24,0	1/1:4,15:20:42.14:1157,42,0	1/1:3,11:10:24.08:671,24,0	1/1:1,9:7:21.03:523,21,0	1/1:1,8:7:11.91:335,12,0	1/1:6,16:14:24.08:627,24,0	1/1:3,18:13:30.10:813,30,0	1/1:1,10:7:9.03:252,9,0	1/1:2,1:2:6.02:168,6,0
chr10	31752908	.	G	GAC	775.73	PASS	AB=0.845;AC=7;AF=0.125;AN=56;BaseQRankSum=9.328;DP=725;FS=4.347;HRun=0;HaplotypeScore=85.5062;InbreedingCoeff=-0.1468;MQ=63.54;MQ0=23;MQRankSum=-6.669;QD=3.59;ReadPosRankSum=2.906;VQSLOD=1.9546;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:34,7:38:99:157,0,900	0/0:6,0:6:18.06:0,18,229	0/0:30,0:29:60.15:0,60,743	0/0:24,0:23:34.21:0,34,568	0/0:20,0:20:57.15:0,57,708	0/0:22,0:21:54.17:0,54,688	0/0:24,0:24:66.19:0,66,825	0/0:49,0:48:99:0,123,1555	0/0:23,0:23:42.15:0,42,678	0/1:24,3:28:19.52:20,0,816	0/0:23,0:23:66.16:0,66,809	0/0:18,2:16:36.12:0,36,458	0/0:17,1:15:36.09:0,36,442	0/0:21,1:17:45.14:0,45,572	0/0:35,0:35:93.30:0,93,1184	0/0:32,2:26:72.19:0,72,877	0/1:34,5:38:99:151,0,941	0/1:23,5:25:99:128,0,657	0/0:23,0:20:48.13:0,48,595	0/0:27,0:27:66.21:0,66,840	0/0:32,0:32:75.22:0,75,938	0/1:19,5:22:89.98:90,0,589	0/0:20,3:21:7.11:0,7,610	0/1:35,8:41:99:201,0,931	0/1:8,4:12:99:159,0,182	0/0:26,1:24:57.18:0,57,726	0/0:17,0:15:36.09:0,36,433	0/0:9,0:9:27.09:0,27,344
chr10	31753237	.	TC	T	6720.59	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=9.314;DP=523;FS=5.229;HRun=1;HaplotypeScore=48.5916;InbreedingCoeff=0.9977;MQ=61.74;MQ0=2;MQRankSum=3.030;QD=36.13;ReadPosRankSum=0.113;VQSLOD=4.5938;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:41:99:0,120,1913	1/1:0,6:6:18.06:252,18,0	0/0:24,0:9:24.06:0,24,360	0/0:24,0:13:24.64:0,25,534	1/1:0,19:19:48.16:671,48,0	1/1:0,16:16:42.14:587,42,0	1/1:0,17:17:48.16:671,48,0	1/1:0,27:26:75.23:1014,75,0	1/1:0,19:19:36.12:503,36,0	0/0:26,0:26:75.25:0,75,1179	0/0:16,0:16:39.10:0,39,576	0/0:14,0:14:42.14:0,42,656	0/0:14,0:14:42.14:0,42,671	0/0:15,0:15:45.15:0,45,718	0/0:16,0:14:42.13:0,42,648	0/0:11,0:10:30.10:0,30,480	0/0:25,0:23:69.17:0,69,1071	0/0:12,0:12:36.12:0,36,575	1/1:2,13:15:39.12:527,39,0	1/1:0,12:12:33.11:462,33,0	1/1:0,29:29:81.27:1133,81,0	0/0:9,0:9:24.07:0,24,360	0/0:19,0:18:51.16:0,51,792	0/0:21,0:21:60.02:0,60,847	0/0:11,0:11:33.04:0,33,497	0/0:23,0:22:66.23:0,66,1055	1/1:0,26:26:66.18:901,66,0	0/0:14,0:14:42.14:0,42,667
chr10	31753304	.	CTATTTTTTGGTCTCCCTGGGCAG	C	94.85	PASS	AB=0.719;AC=1;AF=0.018;AN=56;BaseQRankSum=4.072;DP=364;FS=16.781;HRun=0;HaplotypeScore=203.6800;InbreedingCoeff=-0.0254;MQ=87.28;MQ0=0;MQRankSum=1.086;QD=4.12;ReadPosRankSum=-3.814;VQSLOD=0.9001;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:87.28:0,87,7096	0/0:7,0:7:18.06:0,18,1709	0/0:19,0:19:54.19:0,54,3022	0/0:14,0:14:39.13:0,39,1787	0/0:17,0:17:45.15:0,45,3320	0/0:19,0:19:51.18:0,51,3992	0/0:15,0:15:45.15:0,45,3968	0/0:17,0:17:51.17:0,51,4497	0/0:15,0:15:33.11:0,33,3116	0/1:14,9:23:99:169,0,3697	0/0:14,0:14:39.13:0,39,3552	0/0:7,0:7:21.07:0,21,1450	0/0:6,0:6:18.06:0,18,1117	0/0:5,0:5:12.04:0,12,1082	0/0:7,0:5:15.05:0,15,1491	0/0:10,0:9:18.95:0,19,1853	0/0:18,0:18:51.18:0,51,4958	0/0:10,0:10:24.08:0,24,1964	0/0:7,0:7:21.07:0,21,1887	0/0:14,0:14:39.13:0,39,3696	0/0:11,0:11:30.10:0,30,2497	0/0:6,0:6:18.06:0,18,1746	0/0:7,8:15:21.54:0,22,1323	0/0:16,0:15:29.39:0,29,2394	0/0:2,0:2:6.02:0,6,612	0/0:11,0:10:30.10:0,30,2301	0/0:20,0:19:51.18:0,51,4511	0/0:8,0:8:21.07:0,21,2244
chr10	31753327	.	G	GACACAC	3622.90	PASS	AC=50;AF=0.962;AN=52;BaseQRankSum=-2.566;DP=396;FS=5.314;HRun=0;HaplotypeScore=99.0648;InbreedingCoeff=0.1751;MQ=61.22;MQ0=10;MQRankSum=-0.338;QD=10.21;ReadPosRankSum=-0.813;VQSLOD=2.0153;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:27:11.75:191,12,0	1/1:3,0:10:18.06:230,18,0	./.	./.	1/1:12,0:15:24.05:316,24,0	1/1:12,0:15:12.01:137,12,0	1/1:9,0:12:3.48:40,3,0	1/1:16,0:14:9.03:219,9,0	1/1:13,0:15:9.01:101,9,0	1/1:22,0:22:26.14:354,26,0	1/1:10,1:19:3.01:96,3,0	1/1:6,0:9:3.01:38,3,0	1/1:1,0:5:3.01:38,3,0	1/1:2,3:12:6.02:135,6,0	0/0:2,0:7:15.05:0,15,209	1/1:4,0:9:3.01:78,3,0	1/1:17,0:21:12.21:242,12,0	1/1:9,2:13:8.06:154,8,0	1/1:9,0:9:3.01:78,3,0	1/1:7,0:19:5.23:46,5,0	1/1:11,0:11:3.01:79,3,0	1/1:11,0:9:6.01:104,6,0	1/1:14,0:14:3.01:74,3,0	1/1:11,4:14:2.44:77,2,0	1/1:2,1:5:3.01:97,3,0	1/1:3,1:8:15.03:309,15,0	1/1:20,0:17:6.02:153,6,0	1/1:6,0:13:9.03:235,9,0
chr10	31753691	.	GGTA	G	20203.95	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-0.548;DP=520;FS=3.803;HRun=0;HaplotypeScore=89.1366;InbreedingCoeff=0.9881;MQ=86.81;MQ0=0;MQRankSum=-8.691;QD=44.60;ReadPosRankSum=4.210;VQSLOD=6.2836;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,26:27:66.18:1193,66,0	1/1:0,7:7:15.05:280,15,0	0/0:17,0:17:47.45:0,47,1078	0/0:26,0:26:57.47:0,57,1552	1/1:0,26:26:54.18:988,54,0	1/1:0,27:27:66.23:1230,66,0	1/1:0,19:19:42.14:783,42,0	1/1:0,26:26:75.25:1359,75,0	1/1:0,14:14:42.14:778,42,0	1/1:0,22:22:66.23:1229,66,0	1/1:0,16:16:33.11:615,33,0	1/1:0,18:18:48.16:895,48,0	1/1:0,16:16:39.09:688,39,0	1/1:0,13:13:39.13:726,39,0	0/0:24,0:24:72.25:0,72,1761	1/1:0,13:12:33.11:615,33,0	1/1:0,28:28:60.21:1118,60,0	1/1:0,12:12:25.33:450,25,0	1/1:0,23:23:69.21:1214,69,0	1/1:0,9:9:24.08:429,24,0	1/1:0,22:22:48.16:895,48,0	1/1:0,11:11:21.07:384,21,0	1/1:0,13:13:20.91:391,21,0	1/1:0,21:21:42.62:783,43,0	1/1:0,11:11:21.07:391,21,0	1/1:0,19:19:57.20:1037,57,0	1/1:0,26:26:66.03:1230,66,0	1/1:0,14:14:27.09:503,27,0
chr10	31754013	.	T	TTCTC	1958.94	PASS	AB=0.924;AC=44;AF=0.786;AN=56;BaseQRankSum=2.122;DP=487;FS=6.535;HRun=0;HaplotypeScore=182.9168;InbreedingCoeff=0.2434;MQ=71.90;MQ0=9;MQRankSum=-2.481;QD=5.29;ReadPosRankSum=2.231;VQSLOD=2.2791;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:21:24.99:172,25,0	1/1:6,0:6:6.84:44,7,0	0/0:56,0:39:55.20:0,55,923	0/0:53,0:37:26.95:0,27,497	0/1:20,0:20:6.42:127,0,6	1/1:9,0:8:3.93:23,4,0	0/0:8,0:8:0.16:0,0,1	1/1:23,0:19:16.40:123,16,0	1/1:12,0:11:8.90:70,9,0	1/1:12,0:12:27.37:215,27,0	1/1:14,0:14:4.41:28,4,0	1/1:20,0:19:14.16:135,14,0	1/1:13,0:12:7.16:57,7,0	1/1:13,0:13:1.50:72,1,0	0/1:5,25:19:0:0,0,0	1/1:17,0:17:22.40:177,22,0	0/1:19,0:18:14.82:77,0,15	0/1:11,0:11:7.87:8,0,17	0/1:18,0:15:14.90:63,0,15	1/1:13,0:11:6.92:48,7,0	1/1:16,0:15:6.21:38,6,0	1/1:12,0:12:9.24:95,9,0	1/1:12,0:11:10.36:94,10,0	0/1:18,0:18:9.04:80,0,9	1/1:7,0:6:6.76:73,7,0	1/1:15,0:15:24.45:159,24,0	1/1:9,0:7:13.01:66,13,0	1/1:7,0:7:4.37:60,4,0
chr10	31754020	.	TCG	T	3766.69	PASS	AB=1.000;AC=49;AF=0.875;AN=56;BaseQRankSum=2.773;DP=450;FS=14.729;HRun=0;HaplotypeScore=141.9488;InbreedingCoeff=0.6302;MQ=66.10;MQ0=15;MQRankSum=-3.091;QD=11.24;ReadPosRankSum=0.729;VQSLOD=2.3343;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:23,1:21:24.71:234,25,0	1/1:5,0:5:6.01:42,6,0	0/0:41,0:27:48.05:0,48,940	0/0:42,0:29:34.21:0,34,499	1/1:18,0:17:20.88:176,21,0	1/1:10,0:8:3.18:23,3,0	1/1:8,0:8:5.46:30,5,0	1/1:20,0:14:19.59:160,20,0	1/1:11,0:10:8.80:69,9,0	1/1:13,2:14:33.72:290,34,0	1/1:12,0:12:13.83:102,14,0	1/1:16,4:19:17.01:229,17,0	1/1:11,1:11:22.16:184,22,0	1/1:12,2:14:26.72:201,27,0	0/0:31,1:19:5.96:0,6,44	1/1:12,5:17:42.63:343,43,0	1/1:17,1:17:16.30:252,16,0	1/1:9,0:9:10.67:80,11,0	0/1:16,0:13:1.48:110,0,1	1/1:9,1:8:7.03:39,7,0	1/1:14,0:13:11.83:89,12,0	1/1:10,2:12:20.80:151,21,0	1/1:13,0:11:20.91:164,21,0	1/1:17,1:18:20.97:178,21,0	1/1:8,0:7:2.89:98,3,0	1/1:15,2:15:34.60:304,35,0	1/1:10,0:7:17.98:158,18,0	1/1:4,0:4:7.94:63,8,0
chr10	31754040	.	T	TTG	386.27	PASS	AB=0.938;AC=12;AF=0.214;AN=56;BaseQRankSum=2.664;DP=303;FS=5.919;HRun=0;HaplotypeScore=116.1730;InbreedingCoeff=-0.1445;MQ=44.95;MQ0=26;MQRankSum=-3.859;QD=3.19;ReadPosRankSum=4.730;VQSLOD=1.6080;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:17,1:14:1.50:97,0,1	0/0:2,0:2:3.01:0,3,37	0/0:21,0:11:30.10:0,30,442	0/0:18,0:10:9.20:0,9,222	0/0:11,0:10:2.91:0,3,46	0/0:13,0:11:8.70:0,9,64	0/1:6,0:4:20.67:21,0,31	0/0:9,0:5:13.59:0,14,166	0/0:11,0:9:5.90:0,6,59	0/1:13,0:12:60.79:89,0,61	0/0:6,0:5:8.99:0,9,75	0/1:14,2:15:99:109,0,164	0/0:4,0:3:6.90:0,7,76	0/0:11,0:11:2.68:0,3,139	0/0:32,0:21:24.08:0,24,387	0/1:12,0:12:12.35:12,0,135	0/1:11,1:11:66.01:66,0,81	0/1:8,0:7:26.38:26,0,76	0/1:7,0:3:6.98:7,0,43	0/0:7,0:6:2.99:0,3,24	0/0:7,0:5:2.94:0,3,18	0/0:7,0:7:11.65:0,12,139	0/0:5,1:4:2.69:0,3,26	1/1:13,0:13:5.60:27,6,0	0/0:5,0:4:9.03:0,9,122	0/1:11,1:11:42.23:42,0,103	0/0:12,0:8:15.01:0,15,106	0/1:2,1:2:26.42:31,0,26
chr10	31754042	.	T	TTG	1999.50	PASS	AB=0.860;AC=25;AF=0.446;AN=56;BaseQRankSum=1.466;DP=286;FS=6.478;HRun=0;HaplotypeScore=104.0430;InbreedingCoeff=0.3157;MQ=45.68;MQ0=26;MQRankSum=-4.006;QD=14.08;ReadPosRankSum=2.974;VQSLOD=3.2912;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:9,6:11:24.91:383,25,0	0/0:2,0:2:3.01:0,3,36	0/0:18,0:9:24.08:0,24,353	0/0:17,0:10:12.91:0,13,194	0/0:10,0:9:2.89:0,3,24	0/0:13,0:11:6.29:0,6,52	0/1:7,0:5:6.86:7,0,14	0/0:9,0:5:13.59:0,14,157	0/0:11,0:9:5.83:0,6,40	1/1:7,4:10:15.38:219,15,0	1/1:3,4:6:8.90:60,9,0	0/1:10,5:14:27.22:288,0,27	1/1:2,1:2:2.99:56,3,0	1/1:4,6:10:11.89:168,12,0	0/0:33,0:22:24.08:0,24,384	0/1:8,4:12:26.71:304,0,27	0/1:5,6:10:1.27:232,0,1	0/1:6,1:6:78.88:90,0,79	0/1:6,0:3:27.92:28,0,43	0/0:7,0:6:3.01:0,3,32	0/0:7,0:5:2.94:0,3,18	1/1:4,1:5:2.91:20,3,0	1/1:4,2:4:2.97:20,3,0	1/1:6,6:12:6.02:119,6,0	0/0:3,1:3:3.01:0,3,49	1/1:9,2:9:12.09:173,12,0	0/0:13,0:8:17.77:0,18,148	0/1:3,0:2:1.71:6,0,2
chr10	31754046	.	GCT	G	408.47	PASS	AB=0.912;AC=23;AF=0.479;AN=48;BaseQRankSum=4.601;DP=255;FS=3.636;HRun=0;HaplotypeScore=102.2958;InbreedingCoeff=0.0919;MQ=40.53;MQ0=27;MQRankSum=-4.620;QD=2.60;ReadPosRankSum=1.996;VQSLOD=2.0753;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:10,5:11:17.35:117,17,0	./.	0/0:12,0:6:9.02:0,9,111	0/1:10,1:5:6.73:7,0,46	0/1:7,0:6:0.02:0,0,0	0/0:10,0:8:2.92:0,3,20	0/1:4,1:3:3.56:4,0,29	./.	0/1:10,0:8:0.01:0,0,0	1/1:9,0:8:15.61:75,16,0	./.	0/1:12,4:15:33.37:68,0,33	1/1:2,1:2:1.55:4,2,0	0/1:8,2:10:0.66:23,0,1	0/0:33,0:22:33.10:0,33,544	0/1:9,3:12:42.71:71,0,43	0/1:9,2:10:13.81:47,0,14	0/1:6,0:5:31.77:32,0,33	0/0:6,0:3:0.83:0,1,35	0/0:8,0:6:2.15:0,2,7	0/0:5,1:3:1.55:0,2,4	0/1:5,0:5:0:0,0,0	./.	1/1:10,1:11:5.89:37,6,0	0/0:4,0:3:3.01:0,3,53	1/1:8,2:8:4.93:25,5,0	0/1:14,0:9:6.24:19,0,6	1/1:1,1:1:2.37:8,2,0
chr10	31754054	.	GCT	G	109.81	PASS	AB=0.976;AC=16;AF=0.333;AN=48;BaseQRankSum=1.622;DP=277;FS=2.235;HRun=0;HaplotypeScore=134.3960;InbreedingCoeff=0.0510;MQ=29.15;MQ0=31;MQRankSum=-2.240;QD=0.67;ReadPosRankSum=0.970;VQSLOD=2.6436;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:27,1:24:11.08:63,11,0	./.	0/0:10,0:3:2.98:0,3,22	0/0:12,0:2:6.02:0,6,80	0/1:7,0:6:0.02:0,0,0	0/0:8,0:7:3.80:0,4,22	0/1:6,1:5:5.88:6,0,47	./.	0/1:9,0:8:0.01:1,0,0	0/1:10,0:9:2.34:26,0,2	1/1:8,0:7:0.89:2,1,0	0/1:15,0:14:30.49:30,0,40	0/0:5,0:4:0.36:0,0,2	0/1:12,0:12:2.40:10,0,2	0/0:30,0:22:36.12:0,36,633	0/1:13,0:13:16.06:16,0,65	0/1:16,0:15:11.24:11,0,43	0/1:7,1:7:23.20:23,0,46	0/0:5,0:1:2.97:0,3,20	0/0:6,1:5:1.53:0,2,4	0/0:6,0:4:4.56:0,5,42	./.	0/0:6,0:4:0.89:0,1,2	1/1:17,1:18:5.31:26,5,0	0/0:6,0:5:2.64:0,3,53	0/0:8,0:6:6.98:0,7,37	0/1:14,0:9:7.21:18,0,7	./.
chr10	31754078	.	GCT	G	1858.57	PASS	AB=0.753;AC=41;AF=0.759;AN=54;BaseQRankSum=8.210;DP=287;FS=33.840;HRun=0;HaplotypeScore=112.8909;InbreedingCoeff=0.3058;MQ=53.59;MQ0=35;MQRankSum=-6.034;QD=8.56;ReadPosRankSum=-2.030;VQSLOD=1.3453;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,11:19:39.57:240,40,0	1/1:3,1:4:2.44:28,2,0	0/0:30,0:11:23.02:0,23,282	0/1:39,0:12:34.69:35,0,131	1/1:4,2:5:7.75:31,8,0	1/1:4,5:8:13.93:80,14,0	0/1:6,4:8:20.21:72,0,20	0/1:3,1:4:5.01:5,0,76	1/1:1,8:8:19.81:112,20,0	1/1:3,5:7:17.73:145,18,0	1/1:2,5:7:1.63:49,2,0	0/1:3,3:5:21.30:53,0,21	1/1:2,5:7:15.93:98,16,0	1/1:2,3:5:8.90:42,9,0	0/0:26,0:23:48.16:0,48,851	1/1:4,6:10:8.43:162,8,0	1/1:2,7:9:24.95:218,25,0	1/1:4,3:6:9.22:74,9,0	0/0:4,0:2:2.98:0,3,22	1/1:2,3:3:8.33:39,8,0	0/0:6,0:3:3.01:0,3,40	./.	1/1:2,3:4:5.71:38,6,0	1/1:3,8:11:16.96:81,17,0	0/1:2,5:6:18.31:42,0,18	1/1:4,6:10:29.35:231,29,0	1/1:10,4:13:13.53:104,14,0	1/1:2,1:2:5.92:43,6,0
chr10	31754080	.	T	TTG	3651.01	PASS	AB=0.954;AC=40;AF=0.741;AN=54;BaseQRankSum=7.619;DP=328;FS=27.768;HRun=0;HaplotypeScore=124.5540;InbreedingCoeff=0.0796;MQ=55.46;MQ0=35;MQRankSum=-5.932;QD=12.50;ReadPosRankSum=-2.613;VQSLOD=1.2129;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:20,3:21:42.06:423,42,0	0/1:5,0:4:7.46:24,0,7	0/1:36,0:13:0.09:0,0,277	0/1:41,0:14:7.64:8,0,174	1/1:6,3:8:15.01:138,15,0	1/1:9,1:9:15.03:151,15,0	0/1:8,2:8:14.67:109,0,15	0/1:6,0:6:34.84:35,0,81	1/1:12,0:11:27.52:278,28,0	1/1:7,1:7:18.04:194,18,0	0/1:6,1:7:1.83:115,0,2	0/1:9,0:8:15.60:114,0,16	1/1:6,2:8:23.94:227,24,0	1/1:4,1:5:11.57:103,12,0	0/0:25,0:23:48.16:0,48,783	1/1:10,1:11:8.59:232,9,0	1/1:10,1:11:30.03:287,30,0	1/1:8,0:7:8.75:94,9,0	0/1:5,0:3:15.73:25,0,16	1/1:8,1:5:9.02:92,9,0	0/0:7,1:5:3.01:0,3,44	./.	1/1:9,0:8:11:91,11,0	1/1:13,1:14:20.77:216,21,0	0/1:8,0:7:8.23:100,0,8	1/1:6,4:10:30.06:315,30,0	0/1:12,3:14:16.62:220,0,17	1/1:3,0:2:6.01:61,6,0
chr10	31754086	.	GCT	G	2921.83	PASS	AB=0.664;AC=41;AF=0.759;AN=54;BaseQRankSum=7.839;DP=355;FS=40.443;HRun=0;HaplotypeScore=130.4603;InbreedingCoeff=0.2081;MQ=67.74;MQ0=28;MQRankSum=-6.710;QD=10.66;ReadPosRankSum=0.026;VQSLOD=1.0987;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,20:20:41.78:354,42,0	1/1:5,1:5:2.96:31,3,0	0/0:44,0:19:25.99:0,26,495	0/1:52,0:23:28.67:29,0,273	1/1:0,10:10:8.75:64,9,0	0/1:3,7:9:0.67:100,0,1	0/1:3,6:8:8.95:89,0,9	0/1:4,3:7:35.70:36,0,38	1/1:0,11:11:20.76:151,21,0	1/1:1,7:8:21.05:230,21,0	1/1:1,6:7:1.33:93,1,0	0/1:3,7:9:8.91:87,0,9	1/1:0,8:8:19.16:163,19,0	1/1:2,4:6:13.88:100,14,0	0/0:25,0:25:51.17:0,51,900	1/1:2,9:11:23.51:210,24,0	1/1:0,11:11:25.16:232,25,0	1/1:3,4:6:10.27:101,10,0	0/1:2,3:4:12.48:66,0,12	1/1:0,9:6:8.79:53,9,0	0/0:5,3:5:2.99:0,3,24	./.	1/1:4,6:9:11.72:111,12,0	1/1:0,17:17:17.68:109,18,0	0/1:2,7:8:8.79:100,0,9	1/1:0,10:10:29.98:302,30,0	1/1:2,14:16:23.28:203,23,0	1/1:0,2:2:6.02:65,6,0
chr10	31754201	.	A	ATT	12531.03	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-12.647;DP=522;FS=9.270;HRun=5;HaplotypeScore=85.5780;InbreedingCoeff=0.9722;MQ=74.76;MQ0=3;MQRankSum=-1.631;QD=38.56;ReadPosRankSum=2.988;VQSLOD=3.7038;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,36:37:93.13:1457,93,0	0/0:7,0:7:14.74:0,15,107	0/0:23,0:20:29.47:0,29,336	0/0:13,0:12:16.23:0,16,227	0/0:29,0:27:38.34:0,38,316	0/0:15,0:15:29.41:0,29,210	0/0:8,0:8:11.45:0,11,103	0/0:17,0:17:37.05:0,37,341	0/0:12,0:12:17.15:0,17,108	1/1:3,25:27:69.24:1167,69,0	1/1:1,28:30:81.16:1292,81,0	1/1:2,15:17:30.10:525,30,0	1/1:2,12:14:27.09:472,27,0	1/1:2,14:15:24.08:419,24,0	0/0:18,0:18:45.14:0,45,573	1/1:1,21:23:54.15:912,54,0	1/1:4,13:17:30.10:524,30,0	1/1:0,14:15:33.11:577,33,0	0/0:14,0:14:29.41:0,29,243	0/0:19,0:19:44.41:0,44,423	0/0:8,0:8:5.45:0,5,61	1/1:0,22:22:54.18:899,54,0	1/1:2,23:27:60.07:1006,60,0	1/1:0,19:19:54.18:944,54,0	1/1:3,15:18:33.11:577,33,0	1/1:0,20:22:60.21:1033,60,0	0/0:14,0:13:19.86:0,20,134	1/1:0,20:19:42.14:727,42,0
chr10	31754205	.	T	TAAA	2143.76	PASS	AB=1.000;AC=16;AF=0.286;AN=56;BaseQRankSum=-3.209;DP=499;FS=3.811;HRun=0;HaplotypeScore=125.8269;InbreedingCoeff=0.6227;MQ=72.37;MQ0=3;MQRankSum=-3.801;QD=16.36;ReadPosRankSum=-0.513;VQSLOD=3.2204;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:96.21:0,96,1127	1/1:2,3:7:12.31:190,12,0	0/0:24,0:20:47.28:0,47,603	0/0:11,0:10:29.71:0,30,415	1/1:4,19:25:36.31:698,36,0	1/1:1,14:15:25.11:502,25,0	1/1:1,4:6:13.96:244,14,0	0/1:16,0:16:41.65:42,0,208	1/1:0,11:11:21.07:389,21,0	0/0:29,0:28:75.12:0,75,917	0/0:29,0:29:84.06:0,84,978	0/0:17,0:17:36.10:0,36,463	0/0:11,0:11:26.87:0,27,300	0/0:15,0:14:27.02:0,27,299	0/0:18,0:18:51.16:0,51,910	0/0:24,0:24:60.08:0,60,655	0/0:14,0:14:33.06:0,33,387	0/0:16,0:16:36.09:0,36,428	0/1:11,0:11:65.21:65,0,96	0/1:20,0:20:63.07:63,0,237	1/1:6,0:6:7.21:52,7,0	0/0:21,0:21:57.14:0,57,672	0/0:26,0:26:58.61:0,59,713	0/0:19,0:19:54.11:0,54,633	0/0:15,0:15:39.09:0,39,494	0/0:22,0:22:66.06:0,66,767	0/1:12,0:11:29:88,0,29	0/0:20,0:19:42.13:0,42,522
chr10	31754206	.	T	TAAAA	5375.81	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-10.226;DP=517;FS=0.409;HRun=10;HaplotypeScore=131.7949;InbreedingCoeff=0.9864;MQ=69.38;MQ0=3;MQRankSum=-3.424;QD=35.14;ReadPosRankSum=-4.393;VQSLOD=2.2451;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:87.95:0,88,795	1/1:6,0:6:12.04:183,12,0	0/0:20,0:18:38.59:0,39,434	0/0:10,0:10:18.71:0,19,244	1/1:31,0:27:56.87:879,57,0	1/1:15,0:15:27.09:421,27,0	1/1:7,0:7:18.06:377,18,0	1/1:9,1:24:60.03:901,60,0	1/1:11,0:11:21.07:343,21,0	0/0:29,0:28:62.67:0,63,574	0/0:28,0:28:59.99:0,60,622	0/0:17,0:17:33.79:0,34,337	0/0:11,0:11:26.38:0,26,189	0/0:14,0:14:24.60:0,25,183	0/0:18,0:18:48.06:0,48,654	0/0:24,0:24:58.59:0,59,472	0/0:14,0:14:32.24:0,32,269	0/0:15,0:15:35.87:0,36,320	1/1:4,8:13:30.08:563,30,0	1/1:9,13:25:48.12:1000,48,0	1/1:1,6:7:12:200,12,0	0/0:21,0:21:47.55:0,48,419	0/0:25,0:26:46.89:0,47,499	0/0:19,0:19:52.98:0,53,438	0/0:15,0:15:38.95:0,39,396	0/0:22,0:22:50.48:0,50,460	1/1:4,8:13:24.08:511,24,0	0/0:20,0:19:22.56:0,23,257
chr10	31754412	.	CTCTCCCCCTTCCCCCCCCTCTCTGTCTGTCTG	C	3623.69	PASS	AB=0.913;AC=27;AF=0.675;AN=40;BaseQRankSum=4.840;DP=362;FS=6.834;HRun=0;HaplotypeScore=156.6268;InbreedingCoeff=0.2383;MQ=40.49;MQ0=31;MQRankSum=-1.283;QD=19.59;ReadPosRankSum=2.204;VQSLOD=2.3298;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:17:5.84:244,6,0	1/1:1,0:1:1.55:4,2,0	0/0:35,0:5:15.05:0,15,955	0/0:49,0:9:19.31:0,19,829	./.	0/0:11,0:8:0.47:0,0,1	1/1:10,0:9:3.01:71,3,0	1/1:13,0:12:12.29:112,12,0	1/1:16,0:11:8.24:209,8,0	0/1:11,0:11:77.60:640,0,78	./.	1/1:9,0:6:0.47:1,0,0	1/1:10,0:6:12.04:475,12,0	1/1:14,0:12:9.50:348,10,0	0/1:8,0:7:9.82:10,0,540	1/1:15,0:13:10.65:369,11,0	1/1:11,0:10:6.02:227,6,0	0/1:6,0:5:67.61:176,0,68	1/1:5,0:3:5.95:203,6,0	./.	./.	./.	./.	0/0:11,0:9:0.47:0,0,1	./.	0/1:17,0:16:66.26:535,0,66	0/1:4,13:16:0:0,0,0	./.
chr10	31754415	.	TCCCCCTTCCCCCCC	T	3396.39	PASS	AB=0.917;AC=28;AF=0.737;AN=38;BaseQRankSum=1.818;DP=333;FS=13.123;HRun=0;HaplotypeScore=94.3976;InbreedingCoeff=0.3436;MQ=42.37;MQ0=28;MQRankSum=-2.761;QD=21.50;ReadPosRankSum=2.446;VQSLOD=0.9334;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:16,7:18:9.03:165,9,0	1/1:1,0:1:2.99:24,3,0	0/0:38,0:7:15.05:0,15,957	0/0:46,0:9:19.15:0,19,712	./.	1/1:3,7:8:3.01:120,3,0	1/1:10,0:10:3.01:103,3,0	1/1:4,0:3:5.84:34,6,0	1/1:5,11:11:9.03:277,9,0	1/1:7,4:11:22.37:486,22,0	./.	./.	1/1:4,5:6:12:373,12,0	1/1:5,7:11:9.50:360,10,0	0/1:10,0:9:31.76:32,0,551	1/1:6,9:13:11.05:470,11,0	1/1:9,1:9:6.02:235,6,0	0/1:4,1:4:29.78:116,0,30	1/1:2,1:1:3.01:122,3,0	./.	./.	./.	./.	0/0:4,6:8:0.47:0,0,1	./.	1/1:10,6:15:26.34:480,26,0	0/0:14,0:14:0:0,0,0	./.
chr10	31754416	.	CCCCCTTCCCCCCCCTCTCTGTCTGTCTG	C	4299.50	PASS	AB=1.000;AC=27;AF=0.750;AN=36;BaseQRankSum=4.203;DP=248;FS=5.733;HRun=0;HaplotypeScore=94.7647;InbreedingCoeff=0.3436;MQ=46.65;MQ0=28;MQRankSum=-2.642;QD=40.95;ReadPosRankSum=2.777;VQSLOD=2.5947;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:10,0:8:8.85:269,9,0	1/1:1,0:1:2.99:24,3,0	0/0:38,0:7:20.43:0,20,1248	0/0:46,0:9:19.69:0,20,827	./.	1/1:8,0:7:3.01:48,3,0	1/1:0,0:7:3.01:125,3,0	./.	1/1:11,0:8:9.03:261,9,0	1/1:4,0:4:12.04:706,12,0	./.	./.	1/1:7,0:6:12.04:527,12,0	1/1:9,0:8:9.03:429,9,0	0/1:10,0:9:31.78:32,0,722	1/1:11,0:10:10.81:571,11,0	1/1:2,0:3:6.02:331,6,0	0/1:2,0:2:30.74:182,0,31	1/1:3,0:1:3.01:185,3,0	./.	./.	./.	./.	0/0:7,0:6:0.47:0,0,1	./.	1/1:6,0:6:15.03:609,15,0	0/1:13,0:13:0:0,0,0	./.
chr10	31754434	.	CTGTCTGTCTG	C	1361.58	PASS	AB=0.898;AC=16;AF=0.400;AN=40;BaseQRankSum=7.424;DP=261;FS=5.994;HRun=0;HaplotypeScore=89.0938;InbreedingCoeff=-0.0653;MQ=55.89;MQ0=12;MQRankSum=-4.470;QD=14.04;ReadPosRankSum=5.912;VQSLOD=0.9101;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:11:0.47:72,0,0	0/0:2,0:2:5.97:0,6,114	0/0:35,0:19:56.55:0,57,2331	0/0:39,0:15:35.36:0,35,1209	0/0:7,0:7:2.37:0,2,8	0/1:9,0:9:10.11:10,0,67	1/1:8,0:7:3.01:60,3,0	0/0:4,0:4:12.03:0,12,160	0/1:11,0:10:47.89:48,0,275	0/1:6,0:6:67.59:196,0,68	./.	./.	0/1:7,1:7:60.40:170,0,60	1/1:10,1:9:9.03:190,9,0	0/0:9,0:9:11.96:0,12,371	0/1:7,3:10:33.29:309,0,33	0/1:2,1:3:25.59:168,0,26	0/1:4,0:4:49.28:49,0,109	1/1:1,0:1:3.01:60,3,0	./.	./.	./.	./.	0/0:8,0:7:0.47:0,0,1	./.	0/1:11,0:11:99:157,0,157	0/0:13,0:13:0:0,0,0	./.
chr10	31754920	.	AG	A	5088.84	PASS	AC=50;AF=0.926;AN=54;BaseQRankSum=10.794;DP=264;FS=11.020;HRun=1;HaplotypeScore=228.2367;InbreedingCoeff=0.6794;MQ=98.18;MQ0=0;MQRankSum=-10.759;QD=25.07;ReadPosRankSum=8.936;VQSLOD=2.4278;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,8:8:15.29:154,15,0	1/1:0,5:4:12.01:113,12,0	0/0:28,0:28:84.20:0,84,1244	0/0:33,0:33:96.25:0,96,1466	1/1:1,9:10:16.82:180,17,0	1/1:1,9:10:23.24:240,23,0	1/1:1,3:4:12.01:114,12,0	./.	1/1:1,9:10:30.05:297,30,0	1/1:1,10:10:30.07:325,30,0	1/1:0,7:7:19.85:180,20,0	1/1:0,11:11:30.06:307,30,0	1/1:2,7:9:21.04:213,21,0	1/1:0,14:14:40.62:385,41,0	1/1:0,3:3:9.02:98,9,0	1/1:0,8:8:24.05:242,24,0	1/1:0,10:10:23.29:266,23,0	1/1:0,3:3:1.57:59,2,0	1/1:2,6:8:18.05:203,18,0	1/1:1,10:9:24.05:248,24,0	1/1:0,5:5:7.26:64,7,0	1/1:0,10:10:27.52:265,28,0	1/1:2,6:8:19.27:176,19,0	1/1:2,4:6:0.46:55,0,0	1/1:1,5:3:9.01:88,9,0	1/1:0,11:11:33.08:355,33,0	1/1:0,12:12:36.07:367,36,0	1/1:0,3:3:9.02:94,9,0
chr10	31754926	.	A	AGGTCTTGAT	23673.61	PASS	AC=50;AF=0.926;AN=54;BaseQRankSum=11.552;DP=249;FS=10.251;HRun=0;HaplotypeScore=179.8513;InbreedingCoeff=0.7731;MQ=92.72;MQ0=0;MQRankSum=-11.565;QD=125.26;ReadPosRankSum=10.222;VQSLOD=3.9248;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,7:8:24.06:879,24,0	1/1:0,5:4:12.04:550,12,0	0/0:26,0:26:75.25:0,75,2240	0/0:34,0:34:96.75:0,97,2928	1/1:0,9:9:24.08:1040,24,0	1/1:1,9:10:26.33:1213,26,0	1/1:0,3:3:9.03:413,9,0	./.	1/1:2,9:11:29.42:1368,29,0	1/1:1,10:10:30.10:1425,30,0	1/1:0,7:7:21.07:928,21,0	1/1:1,9:10:30.09:1268,30,0	1/1:0,7:8:21.07:963,21,0	1/1:0,14:14:42.14:1885,42,0	1/1:1,2:3:6.02:277,6,0	1/1:0,8:8:24.08:1109,24,0	1/1:0,10:10:30.10:1315,30,0	1/1:0,3:3:9.03:390,9,0	1/1:0,6:6:18.06:866,18,0	1/1:1,8:7:21.07:971,21,0	1/1:0,3:3:9.03:384,9,0	1/1:0,10:10:30.10:1343,30,0	1/1:0,6:6:18.06:800,18,0	1/1:0,4:4:12.04:487,12,0	1/1:0,5:2:6.02:279,6,0	1/1:0,11:11:33.11:1564,33,0	1/1:1,10:12:36.11:1537,36,0	1/1:0,3:3:9.03:421,9,0
chr10	31754928	.	A	ATC	8655.79	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=11.248;DP=256;FS=9.976;HRun=0;HaplotypeScore=206.8266;InbreedingCoeff=0.7410;MQ=94.53;MQ0=0;MQRankSum=-11.270;QD=44.62;ReadPosRankSum=10.002;VQSLOD=3.0087;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,7:7:20.99:253,21,0	1/1:1,5:5:12.04:190,12,0	0/0:26,0:26:74.92:0,75,1182	0/0:35,0:36:99:0,102,1569	1/1:1,9:10:29.81:398,30,0	1/1:1,9:10:30.07:476,30,0	1/1:2,3:5:15.03:202,15,0	1/1:2,0:2:3:26,3,0	1/1:1,9:11:33.09:531,33,0	1/1:1,10:10:30.05:504,30,0	1/1:0,7:7:21.06:331,21,0	1/1:0,9:9:27.09:463,27,0	1/1:0,7:8:21.07:357,21,0	1/1:0,14:14:42.13:683,42,0	1/1:1,2:3:9.02:131,9,0	1/1:0,8:8:24.08:411,24,0	1/1:0,10:10:19.23:454,19,0	1/1:0,3:3:8.90:123,9,0	1/1:0,6:6:18.06:327,18,0	1/1:2,8:8:24.07:384,24,0	1/1:0,3:3:9.01:124,9,0	1/1:0,10:10:30.08:482,30,0	1/1:0,6:6:18.04:278,18,0	1/1:0,4:4:10.84:136,11,0	1/1:1,5:3:6.02:104,6,0	1/1:0,11:11:33.11:585,33,0	1/1:1,10:11:33.11:546,33,0	1/1:0,3:3:9.03:156,9,0
chr10	31756025	.	AT	A	180.25	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.121;DP=460;FS=4.986;HRun=9;HaplotypeScore=45.2795;InbreedingCoeff=0.8516;MQ=61.29;MQ0=1;MQRankSum=0.211;QD=11.27;ReadPosRankSum=0.641;VQSLOD=2.0812;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:84.22:0,84,943	0/0:7,0:7:21.06:0,21,242	0/0:9,0:7:9.02:0,9,100	0/0:6,0:5:11.90:0,12,112	0/0:22,0:22:60.16:0,60,675	0/0:19,0:19:39.10:0,39,441	0/0:15,0:15:42.12:0,42,485	0/0:28,0:28:69.21:0,69,796	0/0:11,0:11:30.09:0,30,346	0/0:23,0:23:61.42:0,61,695	0/0:26,0:26:71.56:0,72,785	0/0:11,0:11:24.07:0,24,277	0/0:16,0:16:45.13:0,45,518	0/0:12,0:12:33.10:0,33,381	1/1:3,13:16:30:275,30,0	0/0:11,0:11:30.09:0,30,346	0/0:28,0:28:78.22:0,78,888	0/0:9,0:9:27.05:0,27,298	0/0:17,0:17:48.14:0,48,554	0/0:23,0:23:66.18:0,66,743	0/0:4,0:4:9.03:0,9,104	0/0:17,0:17:45.12:0,45,511	0/0:14,0:14:42.12:0,42,485	0/0:5,0:5:15.04:0,15,173	0/0:13,0:13:33.10:0,33,381	0/0:20,0:20:57.14:0,57,635	0/0:27,0:27:66.16:0,66,732	0/0:22,0:22:57.12:0,57,624
chr10	31756224	.	T	TC	542.17	PASS	AB=0.935;AC=18;AF=0.321;AN=56;BaseQRankSum=-4.614;DP=290;FS=0.711;HRun=0;HaplotypeScore=61.1169;InbreedingCoeff=-0.0377;MQ=44.28;MQ0=23;MQRankSum=4.853;QD=3.57;ReadPosRankSum=-2.920;VQSLOD=2.5970;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:19,4:23:76.42:216,0,76	0/0:2,0:1:2.98:0,3,21	0/0:32,0:3:0.58:0,1,1	0/1:29,0:7:20.13:20,0,68	0/0:11,0:9:26.72:0,27,215	0/0:6,0:6:11.82:0,12,96	0/0:7,0:7:18.01:0,18,168	0/0:22,0:17:40.08:0,40,330	0/0:6,0:6:3.01:0,3,36	0/1:10,0:10:25.04:72,0,25	0/1:13,0:13:13.58:49,0,14	1/1:5,0:5:0.40:54,0,0	0/1:3,0:3:5.37:14,0,5	0/1:4,3:7:3.34:25,0,3	0/0:10,0:10:17.90:0,18,184	0/1:2,2:4:1.25:29,0,1	0/1:16,0:13:15.76:16,0,86	0/1:8,0:8:20.57:21,0,54	0/0:13,0:9:25.38:0,25,215	0/0:11,0:9:16.67:0,17,129	0/0:7,0:6:14.82:0,15,116	0/0:3,0:3:2.68:0,3,11	0/1:6,0:6:16.08:16,0,22	0/1:8,0:8:9.16:34,0,9	1/1:4,0:4:3.34:53,3,0	0/1:9,0:9:32.93:33,0,44	0/0:8,0:8:16.16:0,16,149	1/1:7,0:5:3.70:43,4,0
chr10	31756229	.	TC	T	2327.97	PASS	AB=1.000;AC=49;AF=0.875;AN=56;BaseQRankSum=0.777;DP=272;FS=1.217;HRun=1;HaplotypeScore=52.8127;InbreedingCoeff=0.1793;MQ=44.40;MQ0=22;MQRankSum=-1.191;QD=9.62;ReadPosRankSum=1.677;VQSLOD=1.3086;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:21,1:22:61.48:376,61,0	1/1:2,0:1:2.98:21,3,0	0/0:29,1:3:3.59:0,4,10	0/1:26,0:7:7.20:7,0,28	0/1:11,0:9:2.66:69,0,3	1/1:6,0:6:3.55:29,4,0	0/1:7,0:7:21.41:43,0,21	1/1:15,2:12:19.37:120,19,0	1/1:6,0:6:2.60:10,3,0	1/1:9,0:9:19.84:118,20,0	1/1:11,0:11:16.83:101,17,0	1/1:5,0:5:11.75:75,12,0	1/1:4,0:4:11.67:77,12,0	1/1:6,0:6:17.29:98,17,0	1/1:10,0:10:29.16:203,29,0	1/1:4,0:4:11.48:67,11,0	1/1:17,0:14:32.31:175,32,0	1/1:7,0:7:17.53:109,18,0	0/1:11,0:8:2.77:63,0,3	1/1:9,0:7:17.07:108,17,0	1/1:6,0:6:10.74:70,11,0	0/1:3,0:3:0:0,0,0	1/1:4,0:4:8.62:46,9,0	1/1:9,0:9:13.69:95,14,0	1/1:4,1:5:14.66:101,15,0	1/1:9,0:9:26.26:165,26,0	1/1:9,0:9:6.82:68,7,0	1/1:5,0:3:5.68:27,6,0
chr10	31756230	.	CTTTCT	C	5204.69	PASS	AB=1.000;AC=51;AF=0.944;AN=54;BaseQRankSum=-3.155;DP=266;FS=6.760;HRun=0;HaplotypeScore=55.5486;InbreedingCoeff=0.2976;MQ=44.38;MQ0=22;MQRankSum=0.006;QD=22.15;ReadPosRankSum=-0.997;VQSLOD=3.2739;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:16,5:22:60.84:723,61,0	1/1:2,0:1:3.01:46,3,0	0/0:29,0:3:5.91:0,6,40	0/1:26,0:7:23.93:24,0,56	1/1:7,3:8:15.47:178,15,0	1/1:6,0:6:8.93:77,9,0	1/1:6,0:6:14.72:95,15,0	1/1:17,2:13:25.73:304,26,0	1/1:0,6:6:3.01:63,3,0	1/1:1,7:8:20.65:302,21,0	1/1:2,9:11:11.54:159,12,0	1/1:4,1:5:11.03:113,11,0	1/1:2,2:4:12.02:175,12,0	1/1:2,4:6:17.93:281,18,0	1/1:8,2:10:29.87:312,30,0	1/1:3,2:5:14.54:215,15,0	1/1:10,6:13:30.07:436,30,0	1/1:4,3:7:17.73:245,18,0	1/1:10,0:7:17.03:126,17,0	1/1:7,1:7:14.82:132,15,0	1/1:7,0:6:11.91:95,12,0	./.	1/1:0,4:4:9.03:151,9,0	1/1:8,1:9:10.53:120,11,0	1/1:3,2:5:13.99:182,14,0	1/1:5,4:9:25.79:370,26,0	1/1:9,0:9:15.03:172,15,0	1/1:2,3:3:6.02:109,6,0
chr10	31756234	.	CT	C	1892.46	PASS	AB=1.000;AC=51;AF=0.911;AN=56;BaseQRankSum=-1.430;DP=235;FS=8.403;HRun=10;HaplotypeScore=49.0019;InbreedingCoeff=0.2498;MQ=44.50;MQ0=20;MQRankSum=0.653;QD=9.10;ReadPosRankSum=1.657;VQSLOD=1.3768;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:19:31.95:245,32,0	1/1:2,0:1:3:26,3,0	0/0:23,0:3:2.90:0,3,16	0/1:24,0:6:1.72:2,0,16	1/1:9,1:8:8.99:75,9,0	1/1:1,3:4:2.87:15,3,0	0/0:4,0:4:0.47:0,0,1	1/1:13,5:12:12.18:97,12,0	1/1:6,0:6:2.92:17,3,0	1/1:7,0:7:17.95:143,18,0	1/1:9,0:9:8.96:69,9,0	1/1:2,2:4:5.49:34,5,0	1/1:4,0:4:8.86:63,9,0	1/1:6,0:6:17.92:138,18,0	1/1:9,0:9:5.95:46,6,0	1/1:4,0:4:11.93:90,12,0	1/1:13,1:11:26.75:201,27,0	1/1:3,4:7:14.98:125,15,0	1/1:7,1:6:2.99:26,3,0	1/1:5,2:6:2.98:22,3,0	1/1:5,2:6:3:26,3,0	1/1:3,0:3:3:26,3,0	1/1:4,0:4:8.96:69,9,0	1/1:3,4:7:8.94:76,9,0	1/1:4,0:4:8.97:70,9,0	1/1:8,0:8:23.95:194,24,0	1/1:2,5:8:8.02:54,8,0	1/1:5,0:3:5.97:45,6,0
chr10	31757493	.	TTC	T	3808.25	PASS	AB=0.940;AC=30;AF=0.536;AN=56;BaseQRankSum=-7.027;DP=425;FS=2.381;HRun=0;HaplotypeScore=66.3734;InbreedingCoeff=0.2008;MQ=46.59;MQ0=12;MQRankSum=2.755;QD=12.36;ReadPosRankSum=-0.133;VQSLOD=2.7651;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:6,5:8:4.21:0,4,24	1/1:0,6:6:9.03:136,9,0	0/0:24,0:4:2.21:0,2,7	0/1:29,0:10:0.69:1,0,63	1/1:1,18:18:23.97:285,24,0	1/1:0,12:11:15.52:229,16,0	1/1:0,17:16:33.07:473,33,0	1/1:2,9:10:24:243,24,0	1/1:9,9:18:33.04:420,33,0	0/1:14,4:9:73.03:73,0,83	0/1:11,1:7:14.40:14,0,54	0/1:14,0:10:40.81:44,0,41	0/0:10,0:8:14.90:0,15,128	0/1:14,3:14:81.96:82,0,134	0/0:21,0:21:54.16:0,54,742	0/1:13,2:10:36.35:36,0,120	0/1:11,1:11:19.99:20,0,101	0/0:6,2:6:9.03:0,9,109	1/1:3,8:9:24.03:285,24,0	1/1:2,26:23:44.82:648,45,0	1/1:0,8:8:15.05:229,15,0	0/0:11,0:10:26.81:0,27,221	0/1:15,0:12:48.21:48,0,110	0/0:14,0:12:5.34:0,5,73	0/0:18,0:13:1.28:0,1,110	0/1:19,0:13:21.80:22,0,222	1/1:2,21:21:38.51:499,39,0	0/1:4,0:3:20.08:20,0,51
chr10	31757495	.	C	CTT	2231.73	PASS	AB=1.000;AC=36;AF=0.643;AN=56;BaseQRankSum=-3.445;DP=421;FS=0.583;HRun=9;HaplotypeScore=70.5844;InbreedingCoeff=0.4850;MQ=45.19;MQ0=13;MQRankSum=-8.005;QD=7.20;ReadPosRankSum=-1.829;VQSLOD=-0.7638;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,1:7:5.90:37,6,0	0/0:6,0:6:4.36:0,4,11	0/1:21,0:3:0:0,0,0	0/0:28,0:9:4.90:0,5,26	0/1:19,0:18:0.78:53,0,1	0/0:12,0:11:6.49:0,6,16	0/1:17,0:16:9.81:52,0,10	0/1:10,0:9:1.18:18,0,1	0/1:18,0:18:4.58:36,0,5	1/1:15,3:9:14.99:170,15,0	1/1:8,4:8:6.02:79,6,0	1/1:7,7:11:14.52:184,15,0	1/1:7,3:8:14.79:126,15,0	1/1:14,3:14:32.76:353,33,0	0/0:21,0:22:45.05:0,45,534	1/1:14,2:11:20.97:229,21,0	1/1:13,0:12:18.27:148,18,0	1/1:8,0:5:9.02:91,9,0	0/0:8,0:8:2.92:0,3,9	0/0:27,0:22:22.80:0,23,58	0/0:8,0:8:5.46:0,5,14	1/1:11,0:10:20.84:156,21,0	1/1:7,8:14:9.02:105,9,0	1/1:12,2:12:7.65:73,8,0	1/1:8,8:13:20.26:175,20,0	1/1:14,2:11:21.04:201,21,0	0/1:23,0:21:22.65:23,0,23	1/1:3,1:3:8.99:94,9,0
chr10	31757498	.	T	TC	1079.86	PASS	AB=0.745;AC=22;AF=0.407;AN=54;BaseQRankSum=-0.725;DP=423;FS=1.772;HRun=0;HaplotypeScore=66.9105;InbreedingCoeff=0.3183;MQ=44.58;MQ0=17;MQRankSum=-6.311;QD=5.35;ReadPosRankSum=1.210;VQSLOD=3.3167;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,3:6:5.93:53,6,0	0/0:6,0:6:8.97:0,9,70	./.	0/0:26,0:7:11.90:0,12,87	0/0:20,0:19:20.62:0,21,141	0/0:13,0:12:18:0,18,164	0/0:18,0:16:32.72:0,33,262	0/0:9,0:6:14.98:0,15,128	0/0:19,0:18:30.01:0,30,273	0/1:12,8:10:44.04:44,0,96	1/1:8,6:8:3.95:57,4,0	0/1:12,3:12:31.42:42,0,31	1/1:4,6:8:15.97:99,16,0	0/1:11,7:15:15.81:146,0,16	0/0:22,0:22:50.79:0,51,730	0/1:6,8:9:28.26:57,0,28	0/1:7,7:13:26.65:139,0,27	1/1:5,3:5:8.97:71,9,0	0/0:8,0:8:23.96:0,24,215	0/0:28,0:23:47.86:0,48,390	0/0:8,0:8:15.02:0,15,143	1/1:1,8:8:20.64:139,21,0	0/1:13,2:12:18.96:40,0,19	0/1:11,3:12:21.46:53,0,21	1/1:12,7:14:12:129,12,0	0/1:11,7:12:1.87:154,0,2	0/0:24,0:22:38.80:0,39,318	1/1:2,2:3:3.08:40,3,0
chr10	31757501	.	T	TC	455.69	PASS	AB=0.741;AC=16;AF=0.296;AN=54;BaseQRankSum=4.933;DP=431;FS=2.676;HRun=0;HaplotypeScore=67.9282;InbreedingCoeff=0.1310;MQ=42.24;MQ0=20;MQRankSum=-6.308;QD=2.56;ReadPosRankSum=1.357;VQSLOD=2.1987;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:7,3:7:8.16:8,0,12	0/0:6,0:6:8.95:0,9,66	./.	0/0:23,0:5:8.10:0,8,59	0/0:20,0:19:17.62:0,18,118	0/0:12,0:10:18:0,18,163	0/0:20,0:17:35.69:0,36,275	0/0:8,0:5:14.98:0,15,127	0/0:19,0:18:24:0,24,218	0/0:11,8:9:10.19:0,10,142	0/1:11,6:11:9.94:10,0,30	0/1:14,3:13:8.67:9,0,80	1/1:4,6:8:14.71:75,15,0	0/1:11,7:15:38.75:84,0,39	0/0:22,0:22:50.79:0,51,732	0/1:6,8:9:35.35:35,0,37	0/1:7,7:13:38.38:38,0,51	1/1:5,3:5:8.97:71,9,0	0/0:9,0:9:15.03:0,15,148	0/0:29,0:22:50.84:0,51,405	0/0:7,0:7:15.01:0,15,140	1/1:3,8:10:18.43:95,18,0	0/1:12,2:11:9.35:9,0,41	0/0:10,3:11:3.92:0,4,37	0/1:14,7:15:10.92:57,0,11	0/1:13,7:14:72.90:102,0,73	0/0:26,0:24:36.01:0,36,315	0/1:2,2:3:2.78:28,0,3
chr10	31758706	.	AT	A	3660.91	PASS	AB=0.656;AC=29;AF=0.558;AN=52;BaseQRankSum=2.132;DP=446;FS=16.754;HRun=8;HaplotypeScore=41.6248;InbreedingCoeff=0.8063;MQ=29.98;MQ0=69;MQRankSum=-4.950;QD=14.82;ReadPosRankSum=2.719;VQSLOD=1.8880;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,14:15:27.04:261,27,0	0/0:3,0:2:3.01:0,3,35	./.	./.	0/0:30,0:18:30.09:0,30,359	0/0:18,0:16:39.04:0,39,437	0/0:17,0:12:15.05:0,15,181	0/0:22,0:8:18.01:0,18,201	0/0:22,0:20:42.09:0,42,491	1/1:2,14:13:33.05:319,33,0	1/1:4,12:9:15.02:145,15,0	1/1:3,14:11:30.05:289,30,0	1/1:1,15:14:36.06:347,36,0	1/1:2,20:16:42.06:405,42,0	0/0:15,0:15:42.12:0,42,494	1/1:0,19:16:42.06:405,42,0	1/1:5,4:2:3:29,3,0	1/1:5,5:8:12.02:116,12,0	0/0:16,0:7:21.06:0,21,244	0/0:14,0:6:3.01:0,3,36	0/0:18,0:12:12.04:0,12,145	1/1:1,18:11:21.03:203,21,0	1/1:2,8:7:14.05:122,14,0	0/1:10,11:9:32.11:124,0,32	1/1:4,4:4:6.01:58,6,0	1/1:3,30:26:72.11:695,72,0	0/0:24,0:23:63.19:0,63,761	1/1:3,7:5:15.02:145,15,0
chr10	31758836	.	G	GT	3025.53	PASS	AB=0.650;AC=19;AF=0.380;AN=50;BaseQRankSum=4.080;DP=462;FS=3.809;HRun=5;HaplotypeScore=62.6302;InbreedingCoeff=0.8843;MQ=37.64;MQ0=52;MQRankSum=-7.158;QD=20.44;ReadPosRankSum=-3.403;VQSLOD=2.5133;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:30:54.14:0,54,580	./.	./.	./.	1/1:1,17:18:41.97:475,42,0	1/1:3,18:21:42.14:552,42,0	0/1:6,7:6:20.21:87,0,20	1/1:13,12:15:36.12:473,36,0	1/1:2,9:10:21.03:257,21,0	0/0:13,0:12:33.08:0,33,355	0/0:15,0:12:14.90:0,15,161	0/0:26,0:23:27.06:0,27,290	0/0:20,0:19:32.96:0,33,354	0/0:23,0:18:27.07:0,27,290	1/1:3,9:11:20.99:238,21,0	0/0:11,0:9:18.04:0,18,193	0/0:29,0:20:42.11:0,42,451	0/0:18,0:11:21.05:0,21,225	1/1:6,3:3:9.03:118,9,0	1/1:1,10:10:24.04:296,24,0	1/1:4,7:7:12:138,12,0	0/0:13,0:11:11.98:0,12,129	0/0:20,0:17:30.05:0,30,322	0/0:30,0:23:30.07:0,30,322	0/0:13,0:8:15.04:0,15,161	0/0:31,0:24:63.16:0,63,677	1/1:2,15:16:45.15:592,45,0	0/0:12,0:9:15.04:0,15,161
chr10	31759023	.	TC	T	2750.48	PASS	AC=20;AF=0.370;AN=54;BaseQRankSum=5.152;DP=271;FS=10.648;HRun=1;HaplotypeScore=42.5182;InbreedingCoeff=0.9023;MQ=63.59;MQ0=11;MQRankSum=-2.031;QD=31.98;ReadPosRankSum=0.810;VQSLOD=1.9143;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:33.08:0,33,480	./.	0/0:35,0:13:23.72:0,24,344	0/0:49,0:17:41.85:0,42,565	1/1:0,11:11:27.06:356,27,0	1/1:1,8:9:7.96:276,8,0	1/1:0,5:5:10.28:128,10,0	1/1:0,20:19:57.19:796,57,0	1/1:0,4:4:12:145,12,0	0/0:6,0:5:15.05:0,15,240	0/0:6,0:6:17.98:0,18,255	0/0:8,0:8:15.05:0,15,239	0/0:6,0:6:17.98:0,18,212	0/0:2,0:2:6.02:0,6,96	1/1:1,9:8:24.08:335,24,0	0/0:1,0:1:2.96:0,3,19	0/0:9,0:8:23.91:0,24,340	0/0:5,0:5:15:0,15,211	1/1:1,5:4:12.04:168,12,0	1/1:0,7:7:21.07:293,21,0	1/1:0,9:9:21.07:293,21,0	0/0:5,0:5:12.04:0,12,191	0/0:4,0:4:11.96:0,12,160	0/0:11,0:11:33.11:0,33,527	0/0:8,0:8:24.08:0,24,379	0/0:14,0:14:36.05:0,36,499	1/1:0,5:5:12.04:167,12,0	0/0:5,0:5:15.05:0,15,239
chr10	31759062	.	T	TCC	380.73	PASS	AB=1.000;AC=20;AF=0.667;AN=30;BaseQRankSum=0.021;DP=102;FS=5.738;HRun=1;HaplotypeScore=26.1065;InbreedingCoeff=0.2573;MQ=57.86;MQ0=9;MQRankSum=-0.227;QD=8.85;ReadPosRankSum=0.310;VQSLOD=0.3009;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:3,0:2:12.97:28,0,13	./.	0/0:11,0:3:8.90:0,9,83	0/0:29,0:9:2.24:0,2,33	./.	1/1:4,0:4:2.77:20,3,0	1/1:3,0:3:5.98:71,6,0	1/1:5,0:5:12.42:120,12,0	./.	./.	./.	1/1:0,4:4:3.01:31,3,0	./.	./.	1/1:5,0:3:3:26,3,0	./.	0/1:5,0:4:13.55:18,0,14	0/0:4,0:3:5.36:0,5,31	1/1:4,0:3:8.37:83,8,0	./.	./.	1/1:1,0:1:2.97:20,3,0	0/0:3,0:3:2.92:0,3,17	1/1:7,0:7:3.01:34,3,0	./.	1/1:2,0:2:5.95:43,6,0	./.	./.
chr10	31760134	.	C	CA	5904.05	PASS	AB=0.987;AC=52;AF=0.963;AN=54;BaseQRankSum=-3.366;DP=283;FS=2.689;HRun=1;HaplotypeScore=30.7218;InbreedingCoeff=-0.0643;MQ=59.53;MQ0=23;MQRankSum=-4.817;QD=20.94;ReadPosRankSum=1.983;VQSLOD=5.0585;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,6:6:15.05:223,15,0	1/1:0,7:7:21.07:314,21,0	0/1:29,0:11:13.17:13,0,214	0/1:35,1:11:20.50:21,0,187	1/1:0,13:8:21.07:313,21,0	1/1:0,9:8:21.07:313,21,0	1/1:2,1:1:3.01:45,3,0	1/1:4,4:3:9:104,9,0	1/1:0,13:8:18.06:269,18,0	1/1:2,8:6:18.06:269,18,0	1/1:1,12:9:21.03:288,21,0	1/1:0,9:9:18.06:269,18,0	1/1:1,8:8:21.07:313,21,0	1/1:0,10:10:21.07:313,21,0	1/1:1,4:3:3.01:45,3,0	1/1:2,6:6:15.05:224,15,0	1/1:2,0:2:5.98:61,6,0	1/1:1,1:1:3.01:44,3,0	1/1:4,2:1:3.01:45,3,0	1/1:2,20:17:39.13:576,39,0	./.	1/1:1,14:13:33.11:489,33,0	1/1:1,9:6:12.04:179,12,0	1/1:0,1:1:3.01:45,3,0	1/1:0,10:9:24.08:358,24,0	1/1:0,12:12:33.11:493,33,0	1/1:2,5:6:15.05:224,15,0	1/1:0,2:3:5.51:53,6,0
chr10	31763036	.	TTA	T	230.26	PASS	AC=2;AF=0.042;AN=48;BaseQRankSum=2.498;DP=671;FS=3.304;HRun=0;HaplotypeScore=40.3178;InbreedingCoeff=0.4494;MQ=28.43;MQ0=181;MQRankSum=-2.705;QD=12.12;ReadPosRankSum=2.149;VQSLOD=2.6110;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:18:9.03:0,9,173	0/0:9,0:6:9.03:0,9,173	./.	./.	0/0:34,0:26:11.96:0,12,203	0/0:17,0:13:6.02:0,6,95	./.	./.	0/0:23,0:16:11.97:0,12,156	0/0:36,0:23:69.24:0,69,1327	0/0:26,0:19:6.02:0,6,115	0/0:22,0:21:17.97:0,18,305	0/0:19,0:18:20.99:0,21,363	0/0:8,0:7:8.98:0,9,134	1/1:0,19:17:21.07:321,21,0	0/0:15,0:14:15.05:0,15,289	0/0:61,0:25:30.08:0,30,512	0/0:43,0:6:9.03:0,9,139	0/0:20,0:8:24.08:0,24,447	0/0:23,0:16:12.04:0,12,231	0/0:17,0:5:2.96:0,3,58	0/0:20,0:12:3:0,3,25	0/0:29,0:21:18.06:0,18,343	0/0:26,0:14:5.91:0,6,74	0/0:21,0:15:15.05:0,15,267	0/0:25,0:16:44.91:0,45,705	0/0:34,0:27:57.20:0,57,1082	0/0:22,0:13:17.98:0,18,347
chr10	31763555	.	CTTG	C	474.39	PASS	AB=0.917;AC=3;AF=0.054;AN=56;BaseQRankSum=1.609;DP=433;FS=2.097;HRun=0;HaplotypeScore=72.3589;InbreedingCoeff=0.5438;MQ=54.45;MQ0=14;MQRankSum=-2.056;QD=17.57;ReadPosRankSum=1.087;VQSLOD=2.9272;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:14:36:0,36,637	0/1:10,1:11:27.42:27,0,57	0/0:7,0:3:9.03:0,9,171	0/0:7,0:4:8.68:0,9,51	0/0:32,0:32:17.44:0,17,183	0/0:14,0:14:26.55:0,27,139	0/0:11,0:10:13.54:0,14,106	0/0:26,0:23:46.21:0,46,350	0/0:6,0:6:7.59:0,8,28	0/0:25,0:25:69.03:0,69,1235	0/0:26,0:23:41.97:0,42,643	0/0:13,0:13:26.92:0,27,451	0/0:9,0:9:27.09:0,27,517	0/0:12,0:12:36.02:0,36,538	1/1:0,16:16:33.11:553,33,0	0/0:6,0:6:15.05:0,15,293	0/0:22,0:22:57.19:0,57,1098	0/0:16,0:15:39.04:0,39,680	0/0:13,0:12:32.95:0,33,194	0/0:23,0:22:50.23:0,50,217	0/0:8,0:8:18.07:0,18,68	0/0:12,0:11:27.06:0,27,461	0/0:14,0:13:29.84:0,30,565	0/0:11,0:10:26.94:0,27,434	0/0:23,0:20:47.95:0,48,907	0/0:18,0:16:42.04:0,42,601	0/0:20,0:17:38.10:0,38,152	0/0:16,0:13:33.10:0,33,628
chr10	31763558	.	GTT	G	2764.88	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=7.435;DP=440;FS=0.000;HRun=13;HaplotypeScore=59.3727;InbreedingCoeff=0.9558;MQ=54.92;MQ0=8;MQRankSum=0.094;QD=15.19;ReadPosRankSum=0.931;VQSLOD=2.2738;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:33.10:0,33,451	1/1:3,8:11:20.69:185,21,0	0/0:8,0:3:8.99:0,9,97	0/0:9,0:5:5.98:0,6,48	1/1:8,20:30:47.41:418,47,0	1/1:2,12:14:24:233,24,0	1/1:3,7:10:20.74:186,21,0	1/1:6,17:24:30.68:406,31,0	1/1:1,5:6:9.01:87,9,0	0/0:22,0:26:67.52:0,68,842	0/0:24,0:23:32.55:0,33,417	0/0:11,0:12:18.06:0,18,261	0/0:10,0:9:27.08:0,27,370	0/0:10,0:12:28.88:0,29,316	1/1:17,0:17:11.57:86,12,0	0/0:6,0:6:15.04:0,15,199	0/0:24,0:25:60.59:0,61,803	0/0:16,0:16:38.79:0,39,470	1/1:5,10:14:26.96:253,27,0	1/1:1,23:23:54.51:522,55,0	1/1:0,9:9:20.75:203,21,0	0/0:12,0:11:21.06:0,21,286	0/0:14,0:13:27.09:0,27,391	0/0:11,0:10:21.07:0,21,303	0/0:25,0:21:47.94:0,48,638	0/0:17,0:17:27.07:0,27,342	1/1:2,18:17:42.06:407,42,0	0/0:14,0:14:35.58:0,36,446
chr10	31764580	.	T	TG	16275.18	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-5.567;DP=522;FS=1.780;HRun=5;HaplotypeScore=51.9755;InbreedingCoeff=0.9951;MQ=72.51;MQ0=0;MQRankSum=-5.076;QD=33.01;ReadPosRankSum=5.030;VQSLOD=4.9393;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,38:39:82.87:1320,83,0	1/1:1,9:10:24.08:316,24,0	0/0:17,0:16:42.07:0,42,433	0/0:12,0:11:27.06:0,27,283	1/1:0,20:20:48.15:628,48,0	1/1:3,14:17:42.14:551,42,0	1/1:2,16:18:39.13:513,39,0	1/1:3,25:27:72.22:932,72,0	1/1:0,14:14:42.14:553,42,0	1/1:2,24:26:72.23:947,72,0	1/1:0,17:17:45.15:592,45,0	1/1:3,8:11:24.08:316,24,0	1/1:1,14:15:42.14:552,42,0	1/1:2,14:16:39.12:501,39,0	1/1:1,14:15:33.11:434,33,0	1/1:0,9:9:27.09:355,27,0	1/1:0,26:26:69.20:908,69,0	1/1:2,10:12:30.10:395,30,0	1/1:3,22:25:66.21:868,66,0	1/1:0,16:16:42.09:532,42,0	1/1:8,31:39:84.25:1088,84,0	1/1:1,9:10:24.08:315,24,0	1/1:2,13:15:33.08:432,33,0	1/1:1,21:22:57.19:750,57,0	1/1:2,19:21:51.17:670,51,0	1/1:2,12:14:36.12:473,36,0	1/1:3,19:22:57.18:743,57,0	1/1:0,16:16:45.15:592,45,0
chr10	31764900	.	AG	A	786.28	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.148;DP=603;FS=4.246;HRun=1;HaplotypeScore=58.3456;InbreedingCoeff=0.9989;MQ=82.40;MQ0=0;MQRankSum=-1.684;QD=35.74;ReadPosRankSum=1.661;VQSLOD=3.7240;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,114,1760	0/0:10,0:10:30.08:0,30,453	0/0:21,0:21:60.18:0,60,899	0/0:20,0:20:52.45:0,52,741	0/0:24,0:24:72.09:0,72,1083	0/0:22,0:22:66.23:0,66,1052	0/0:17,0:17:51.17:0,51,815	0/0:35,0:35:99:0,105,1612	0/0:18,0:18:54.18:0,54,857	0/0:21,0:21:63.21:0,63,1007	0/0:20,0:20:60.19:0,60,934	0/0:13,0:13:39.13:0,39,623	0/0:25,0:25:75.24:0,75,1174	0/0:22,0:22:66.20:0,66,1009	1/1:0,22:22:63.21:881,63,0	0/0:19,0:19:57.18:0,57,888	0/0:12,0:12:33.07:0,33,478	0/0:13,0:13:36.12:0,36,575	0/0:25,0:25:75.25:0,75,1172	0/0:29,0:29:84.27:0,84,1302	0/0:23,0:23:69.22:0,69,1072	0/0:19,0:19:54.16:0,54,816	0/0:19,0:19:57.18:0,57,887	0/0:15,0:15:45.15:0,45,719	0/0:16,0:16:48.16:0,48,761	0/0:38,0:38:99:0,114,1778	0/0:33,0:32:99:0,99,1581	0/0:12,0:12:36.11:0,36,551
chr10	31765204	.	AAAAC	A	14080.93	PASS	AB=0.682;AC=49;AF=0.875;AN=56;BaseQRankSum=3.730;DP=590;FS=9.733;HRun=0;HaplotypeScore=153.0769;InbreedingCoeff=0.8178;MQ=70.41;MQ0=3;MQRankSum=-3.028;QD=27.77;ReadPosRankSum=4.351;VQSLOD=4.1428;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:18,17:35:8.40:859,8,0	1/1:1,0:6:15.02:140,15,0	0/0:38,0:27:27.56:0,28,625	0/0:26,0:24:37.37:0,37,771	1/1:9,0:22:18.81:259,19,0	1/1:5,0:22:33.04:307,33,0	1/1:1,0:19:45.06:429,45,0	1/1:10,0:32:39.69:365,40,0	1/1:2,0:18:27.03:251,27,0	1/1:7,22:28:66.18:1059,66,0	1/1:1,22:23:63.22:1039,63,0	1/1:2,9:11:27.09:446,27,0	1/1:4,11:15:33.11:545,33,0	1/1:2,14:16:36.12:593,36,0	0/0:19,0:19:45.15:0,45,1103	1/1:2,16:18:45.15:743,45,0	1/1:5,19:24:48.16:793,48,0	1/1:3,10:13:26.93:446,27,0	0/1:8,0:15:10.80:67,0,11	1/1:6,0:30:54.62:575,55,0	1/1:5,0:16:15.02:139,15,0	1/1:5,12:17:33.11:532,33,0	1/1:1,21:22:54.15:891,54,0	1/1:2,19:21:48.16:792,48,0	1/1:5,15:20:42.14:693,42,0	1/1:6,19:25:57.19:934,57,0	1/1:3,0:19:42.05:391,42,0	1/1:1,16:17:48.16:792,48,0
chr10	31766131	.	CT	C	6476.42	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-11.409;DP=550;FS=7.131;HRun=10;HaplotypeScore=76.8215;InbreedingCoeff=0.9324;MQ=79.97;MQ0=0;MQRankSum=-3.301;QD=21.23;ReadPosRankSum=4.434;VQSLOD=5.6222;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,24:25:62.99:547,63,0	0/0:1,0:5:8.52:0,9,43	0/0:20,1:20:1.13:0,1,237	0/0:18,0:15:8.37:0,8,109	0/0:7,0:31:71.31:0,71,392	0/0:6,0:29:59.82:0,60,317	0/0:3,0:21:42.77:0,43,224	0/0:10,0:28:54.34:0,54,312	0/0:3,0:18:28.57:0,29,161	1/1:7,19:27:67.99:577,68,0	1/1:2,20:22:65.83:554,66,0	1/1:3,15:18:44.98:391,45,0	1/1:5,21:26:47.97:417,48,0	1/1:2,16:18:50.99:443,51,0	0/0:2,0:10:20.21:0,20,129	1/1:0,13:14:24.64:298,25,0	1/1:4,17:21:18.51:315,19,0	1/1:1,8:9:21:182,21,0	0/0:6,0:16:31.56:0,32,184	0/0:2,0:22:54.40:0,54,288	0/0:2,0:4:5.68:0,6,28	1/1:3,10:13:32.98:286,33,0	1/1:3,21:24:53.98:469,54,0	1/1:5,12:17:38.99:339,39,0	1/1:1,15:16:44.99:391,45,0	1/1:1,29:30:86.98:755,87,0	0/0:1,0:19:34.09:0,34,170	1/1:2,23:25:32.72:514,33,0
chr10	31766219	.	C	CA	7835.04	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=10.715;DP=528;FS=1.099;HRun=7;HaplotypeScore=68.1800;InbreedingCoeff=0.9955;MQ=71.70;MQ0=0;MQRankSum=-0.076;QD=30.37;ReadPosRankSum=2.568;VQSLOD=5.2291;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,14:18:48.13:567,48,0	0/0:8,0:8:15.02:0,15,145	0/0:15,0:12:26.08:0,26,214	0/0:12,1:12:21.93:0,22,226	0/0:29,0:29:72.09:0,72,689	0/0:16,0:16:39.05:0,39,377	0/0:18,0:18:45.05:0,45,428	0/0:31,0:30:72.09:0,72,691	0/0:20,0:20:48.08:0,48,464	1/1:6,17:24:28.06:579,28,0	1/1:3,21:24:66.16:772,66,0	1/1:0,9:9:21.06:254,21,0	1/1:5,11:16:36.10:425,36,0	1/1:2,19:21:57.17:689,57,0	0/0:23,0:23:66.11:0,66,637	1/1:0,16:16:48.15:580,48,0	1/1:2,9:11:30.05:346,30,0	1/1:0,7:7:21.06:254,21,0	0/0:14,0:14:33.05:0,33,319	0/0:28,0:28:69.10:0,69,665	0/0:20,0:20:60.10:0,60,579	1/1:3,9:12:27.08:326,27,0	1/1:0,13:13:36.11:435,36,0	1/1:4,21:25:60.18:725,60,0	1/1:6,20:26:57.17:689,57,0	1/1:4,23:27:72.22:870,72,0	0/0:34,0:33:96.13:0,96,921	1/1:0,9:9:27.08:326,27,0
chr10	31766462	.	A	AT	5374.31	PASS	AB=0.944;AC=24;AF=0.429;AN=56;BaseQRankSum=8.917;DP=387;FS=3.694;HRun=6;HaplotypeScore=54.8060;InbreedingCoeff=0.8197;MQ=61.00;MQ0=2;MQRankSum=-0.243;QD=27.42;ReadPosRankSum=-1.573;VQSLOD=4.7123;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:57.11:0,57,574	1/1:0,5:5:15.05:189,15,0	0/1:6,0:4:7.51:8,0,52	0/0:5,0:3:1.40:0,1,32	1/1:3,17:20:51.16:639,51,0	1/1:3,12:15:27.09:340,27,0	1/1:1,10:11:18.06:225,18,0	1/1:4,27:30:78.22:953,78,0	1/1:1,13:14:32.15:427,32,0	0/0:21,0:21:54.11:0,54,547	0/0:12,0:12:27.06:0,27,275	0/0:8,0:8:24.04:0,24,237	0/0:12,0:12:30.03:0,30,295	0/0:9,0:9:27.06:0,27,275	1/1:4,15:19:35.33:422,35,0	0/1:7,1:8:19.70:20,0,135	0/0:24,0:24:59.35:0,59,588	0/0:11,0:11:33.08:0,33,337	1/1:4,18:22:54.15:664,54,0	1/1:0,13:13:36.05:433,36,0	1/1:0,6:6:18.06:226,18,0	0/0:3,0:3:9.02:0,9,92	0/0:7,0:7:15.03:0,15,153	0/0:7,0:7:21.05:0,21,214	0/0:16,0:16:42.08:0,42,424	0/0:21,0:21:54.11:0,54,546	1/1:2,23:26:66.21:829,66,0	0/0:14,0:14:42.10:0,42,428
chr10	31766839	.	AAAAGAGAG	A	2237.23	PASS	AB=1.000;AC=20;AF=0.357;AN=56;BaseQRankSum=0.076;DP=510;FS=1.457;HRun=0;HaplotypeScore=114.7745;InbreedingCoeff=0.7316;MQ=63.89;MQ0=27;MQRankSum=0.941;QD=11.65;ReadPosRankSum=-1.036;VQSLOD=1.8292;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:95.33:0,95,1038	1/1:3,0:3:7.75:66,8,0	0/0:24,0:17:33.96:0,34,359	0/0:17,0:13:17.15:0,17,279	1/1:1,24:25:8.62:58,9,0	1/1:12,0:11:17.98:148,18,0	0/0:3,23:25:2.50:0,2,9	1/1:15,17:29:76.48:550,76,0	1/1:1,0:20:6:53,6,0	0/0:18,0:17:50.85:0,51,854	0/0:10,0:9:23.96:0,24,322	0/1:19,0:17:41.89:42,0,251	0/0:17,0:17:46.26:0,46,559	0/0:13,0:12:2.96:0,3,430	0/1:14,0:14:99:154,0,414	0/0:18,0:17:40.57:0,41,637	0/0:22,0:20:24.32:0,24,752	0/0:8,0:7:20.95:0,21,236	1/1:15,0:13:32.96:287,33,0	1/1:0,15:15:4.41:119,4,0	1/1:14,0:14:34.62:314,35,0	0/0:12,0:11:26.89:0,27,252	0/0:15,0:15:36.02:0,36,431	0/0:28,0:26:47.62:0,48,542	0/0:17,0:16:45.81:0,46,770	0/0:12,0:11:29.76:0,30,315	1/1:22,0:20:56.75:646,57,0	0/0:20,0:13:29.83:0,30,332
chr10	31766887	.	GAGAGAC	G	1967.89	PASS	AB=0.998;AC=24;AF=0.429;AN=56;BaseQRankSum=4.552;DP=593;FS=3.287;HRun=0;HaplotypeScore=114.3694;InbreedingCoeff=0.1753;MQ=69.23;MQ0=27;MQRankSum=1.648;QD=4.97;ReadPosRankSum=1.877;VQSLOD=2.0598;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:47,0:47:3.52:4,0,121	0/0:8,0:8:8.98:0,9,112	0/0:27,0:12:4.43:0,4,219	0/1:52,0:21:13.63:14,0,223	0/0:20,0:20:17.24:0,17,138	0/0:20,0:19:34.68:0,35,261	0/0:22,0:21:29.90:0,30,239	0/0:37,0:37:83.85:0,84,742	0/1:16,0:16:50.72:51,0,117	0/1:25,0:23:99:210,0,169	0/1:14,0:13:7.28:7,0,41	1/1:5,10:14:8.88:173,9,0	1/1:16,0:16:29.84:269,30,0	1/1:19,0:18:43.23:405,43,0	0/0:14,0:14:39.01:0,39,656	0/1:19,0:18:99:185,0,155	0/1:33,0:32:7.72:8,0,170	0/1:12,0:12:7.66:134,0,8	0/0:11,0:11:29.73:0,30,233	0/0:25,0:22:18.71:0,19,315	0/0:13,0:11:25.21:0,25,223	0/1:17,0:15:0:0,0,0	1/1:16,0:16:5.63:32,6,0	1/1:21,0:20:5.88:60,6,0	0/1:18,0:18:99:204,0,144	1/1:19,0:17:47.40:374,47,0	0/1:23,0:22:5.04:5,0,308	0/1:12,0:11:11.16:11,0,47
chr10	31766889	.	GAGAC	G	2423.06	PASS	AB=0.910;AC=27;AF=0.482;AN=56;BaseQRankSum=3.801;DP=581;FS=4.114;HRun=0;HaplotypeScore=97.8214;InbreedingCoeff=0.5716;MQ=72.02;MQ0=25;MQRankSum=0.341;QD=8.02;ReadPosRankSum=1.636;VQSLOD=2.2110;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:44,0:44:11.88:12,0,13	0/0:8,0:8:23.07:0,23,150	0/0:29,0:14:14.92:0,15,274	0/0:53,0:22:7.75:0,8,257	0/0:20,0:20:32.42:0,32,217	0/0:20,0:19:36.14:0,36,307	0/0:23,0:22:35.89:0,36,288	0/0:39,0:39:99:0,100,824	0/1:16,0:16:9.24:9,0,117	1/1:23,0:21:0.29:290,0,0	1/1:14,0:13:7.20:36,7,0	1/1:14,0:13:9.02:106,9,0	1/1:12,2:14:35.54:337,36,0	1/1:15,0:16:44.99:495,45,0	0/0:17,0:17:44.99:0,45,582	0/1:19,0:18:92.09:200,0,92	1/1:33,1:32:9.14:102,9,0	1/1:11,0:11:18.20:155,18,0	0/0:11,0:11:29.73:0,30,233	0/0:25,0:22:44.24:0,44,373	0/0:13,0:11:31.06:0,31,266	0/1:3,13:14:0:0,0,0	1/1:0,15:15:5.70:76,6,0	1/1:3,17:18:5.81:73,6,0	0/1:18,0:18:69.39:230,0,69	1/1:2,16:16:47.62:439,48,0	0/0:21,0:21:48.58:0,49,501	1/1:3,7:10:3.01:59,3,0
chr10	31766891	.	GAC	G	2591.75	PASS	AB=1.000;AC=28;AF=0.500;AN=56;BaseQRankSum=3.659;DP=567;FS=3.988;HRun=0;HaplotypeScore=82.6871;InbreedingCoeff=0.8107;MQ=74.96;MQ0=25;MQRankSum=0.105;QD=9.53;ReadPosRankSum=1.371;VQSLOD=3.2499;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,36:40:5.89:63,6,0	0/0:8,0:8:23.76:0,24,172	0/0:30,0:15:27.49:0,27,306	0/0:55,0:24:13.54:0,14,310	0/0:19,0:19:32.42:0,32,217	0/0:20,0:19:35.65:0,36,277	0/0:22,0:21:35.89:0,36,288	0/0:39,0:39:99:0,100,830	0/0:15,0:15:23.11:0,23,171	1/1:4,17:19:33.68:432,34,0	1/1:1,12:12:9.33:81,9,0	1/1:14,0:13:8.94:71,9,0	1/1:12,0:12:35.53:283,36,0	1/1:17,0:17:47.74:393,48,0	0/0:16,0:16:41.98:0,42,447	0/1:19,0:18:2.99:225,0,3	1/1:8,25:31:3.75:251,4,0	1/1:10,0:10:23.91:200,24,0	0/0:11,0:11:29.73:0,30,233	0/0:26,0:23:47.64:0,48,381	0/0:13,0:11:31.06:0,31,265	0/1:15,0:13:0:0,0,0	1/1:15,0:15:5.73:45,6,0	1/1:20,0:18:3.47:29,3,0	1/1:18,0:18:24.85:323,25,0	1/1:18,0:16:47.66:377,48,0	0/0:21,0:21:56.42:0,56,494	1/1:7,0:7:3:27,3,0
chr10	31768332	.	GTATT	G	2426.90	PASS	AB=0.941;AC=32;AF=0.615;AN=52;BaseQRankSum=3.082;DP=174;FS=0.000;HRun=0;HaplotypeScore=65.2609;InbreedingCoeff=0.4163;MQ=71.90;MQ0=2;MQRankSum=-3.599;QD=22.47;ReadPosRankSum=1.752;VQSLOD=3.2669;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:4:8.46:112,8,0	0/0:4,0:4:8.91:0,9,65	0/0:14,1:9:4.71:0,5,261	0/1:13,0:9:2.76:3,0,67	0/1:10,1:11:45.30:45,0,169	0/1:9,2:11:99:110,0,232	0/0:3,0:3:2.94:0,3,18	0/0:25,0:23:51.10:0,51,1083	0/0:1,0:1:3.01:0,3,34	1/1:3,5:8:21.07:348,21,0	1/1:5,0:5:9.03:124,9,0	1/1:0,4:4:12.04:211,12,0	1/1:1,3:4:9.03:139,9,0	1/1:2,1:3:6.02:83,6,0	1/1:2,2:4:12.04:202,12,0	1/1:1,1:2:3.01:53,3,0	1/1:10,3:13:22.44:337,22,0	1/1:2,1:3:3.01:52,3,0	0/0:2,0:2:3.01:0,3,77	0/0:4,0:4:6.02:0,6,108	0/1:2,0:2:23.80:24,0,48	1/1:0,1:1:3.01:47,3,0	./.	./.	1/1:3,9:12:30.09:462,30,0	1/1:4,3:7:12.04:213,12,0	0/0:11,0:11:33.11:0,33,753	1/1:0,1:1:3.01:31,3,0
chr10	31768338	.	ATT	A	600.12	PASS	AB=0.828;AC=23;AF=0.442;AN=52;BaseQRankSum=5.913;DP=167;FS=2.195;HRun=3;HaplotypeScore=71.6079;InbreedingCoeff=0.3112;MQ=62.89;MQ0=2;MQRankSum=-3.891;QD=6.82;ReadPosRankSum=1.114;VQSLOD=0.2978;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:4,1:5:11.98:74,12,0	0/0:3,0:3:9.03:0,9,164	0/0:12,0:6:4.44:0,4,213	0/1:11,0:9:12.29:12,0,47	0/0:9,0:9:14.66:0,15,342	0/0:11,0:11:12.43:0,12,429	0/0:1,0:1:3.01:0,3,54	0/0:24,0:22:53.64:0,54,1028	0/0:1,0:1:3.01:0,3,58	1/1:7,0:7:3.91:54,4,0	0/1:3,0:3:3.40:3,0,7	1/1:4,1:5:13.33:77,13,0	0/1:3,0:3:2.47:17,0,2	0/1:3,1:4:15.14:36,0,15	1/1:3,1:4:9.81:54,10,0	1/1:1,0:1:2.60:10,3,0	0/1:10,3:13:11.26:118,0,11	0/1:3,2:5:2.76:45,0,3	0/0:1,0:1:3.01:0,3,58	0/0:3,0:3:9.02:0,9,141	0/0:2,0:2:6.02:0,6,95	1/1:1,0:1:1.55:4,2,0	./.	./.	1/1:12,3:15:0.64:141,1,0	1/1:6,0:6:10.47:42,10,0	0/0:11,0:11:33.11:0,33,630	0/1:1,2:3:3.13:72,0,3
chr10	31768340	.	T	TG	897.69	PASS	AB=0.837;AC=26;AF=0.481;AN=54;BaseQRankSum=2.532;DP=167;FS=0.676;HRun=0;HaplotypeScore=69.4285;InbreedingCoeff=0.5030;MQ=62.07;MQ0=3;MQRankSum=-3.743;QD=11.66;ReadPosRankSum=2.700;VQSLOD=4.1089;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:3,2:5:13.07:48,0,13	0/0:3,0:3:9.03:0,9,125	0/0:11,1:6:4.71:0,5,158	0/0:14,0:9:11.54:0,12,84	0/0:9,0:9:18.98:0,19,259	0/0:11,0:11:27.35:0,27,365	0/0:1,0:1:3.01:0,3,42	0/0:22,0:20:59.97:0,60,752	0/0:1,0:1:3.01:0,3,42	1/1:8,0:8:20.14:123,20,0	1/1:1,2:3:9.03:120,9,0	1/1:5,0:5:11.31:72,11,0	1/1:4,0:4:11.40:73,11,0	0/1:3,1:4:1.82:49,0,2	1/1:4,0:4:7.84:40,8,0	1/1:1,0:1:2.80:13,3,0	1/1:10,3:13:2.88:149,3,0	0/1:4,1:5:10.23:25,0,10	0/0:1,0:1:3.01:0,3,42	0/0:2,0:2:6.02:0,6,84	0/0:2,0:2:6.02:0,6,84	1/1:1,0:1:3.01:47,3,0	./.	1/1:1,0:1:3:26,3,0	1/1:13,3:16:24.15:211,24,0	1/1:3,1:4:11.25:54,11,0	0/0:11,0:11:33.11:0,33,460	0/1:3,0:3:1.54:26,0,2
chr10	31768344	.	TG	T	651.44	PASS	AB=0.917;AC=26;AF=0.481;AN=54;BaseQRankSum=4.855;DP=162;FS=0.649;HRun=1;HaplotypeScore=71.9828;InbreedingCoeff=0.6184;MQ=51.82;MQ0=3;MQRankSum=-3.709;QD=9.18;ReadPosRankSum=1.685;VQSLOD=1.1752;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,2:5:6.78:68,7,0	0/0:3,0:3:8.76:0,9,70	0/0:8,1:3:9.03:0,9,144	0/0:8,2:7:8.47:0,8,58	0/0:9,0:9:23.51:0,24,211	0/0:11,0:11:31.37:0,31,249	0/0:1,0:1:2.88:0,3,15	0/0:24,0:22:60.39:0,60,800	0/0:1,0:1:3.01:0,3,31	1/1:7,0:7:0.27:43,0,0	1/1:1,2:3:9.01:102,9,0	1/1:5,0:5:12.87:60,13,0	1/1:4,0:4:6.76:36,7,0	1/1:3,1:4:9.65:48,10,0	0/0:5,0:5:2.62:0,3,34	1/1:1,0:1:2.22:7,2,0	1/1:10,2:12:24.75:195,25,0	0/1:4,1:5:3.49:37,0,3	0/0:1,0:1:3.01:0,3,46	0/0:2,0:2:6.02:0,6,95	0/0:2,0:2:6.02:0,6,95	1/1:1,0:1:0.47:1,0,0	./.	0/1:1,0:1:0:0,0,0	1/1:13,3:16:25.40:146,25,0	1/1:3,1:4:9.19:31,9,0	0/0:10,0:10:30.10:0,30,476	1/1:3,0:3:8.50:51,8,0
chr10	31768345	.	GTATT	G	1722.70	PASS	AB=0.969;AC=29;AF=0.604;AN=48;BaseQRankSum=2.855;DP=164;FS=7.015;HRun=0;HaplotypeScore=76.4368;InbreedingCoeff=-0.0198;MQ=47.43;MQ0=3;MQRankSum=-2.229;QD=14.01;ReadPosRankSum=0.254;VQSLOD=2.3835;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:5,0:5:5.10:111,0,5	1/1:1,2:3:9.01:130,9,0	./.	0/0:13,0:6:2.98:0,3,22	1/1:6,3:9:20.87:254,21,0	1/1:9,1:10:29.91:348,30,0	1/1:0,1:1:3.01:53,3,0	0/1:25,0:23:31.59:32,0,175	1/1:1,0:1:3.01:39,3,0	1/1:7,0:7:6.10:39,6,0	0/0:3,0:3:7.25:0,7,37	0/1:5,0:5:11.85:34,0,12	0/1:4,0:4:28.99:49,0,29	0/1:3,1:4:14.53:83,0,15	1/1:5,0:5:5.58:51,6,0	0/0:1,0:1:0:0,0,0	0/1:11,1:12:22.94:228,0,23	1/1:5,0:5:8.34:126,8,0	./.	0/0:2,0:2:5.91:0,6,57	1/1:2,0:2:1.25:3,1,0	./.	./.	1/1:1,0:1:3.01:45,3,0	0/1:16,0:16:74.47:133,0,74	0/1:5,0:5:35.37:38,0,35	0/0:10,0:10:9.03:0,9,124	0/1:3,0:3:13.53:69,0,14
chr10	31768349	.	T	TG	827.43	PASS	AB=0.777;AC=13;AF=0.260;AN=50;BaseQRankSum=4.003;DP=169;FS=8.647;HRun=0;HaplotypeScore=79.2820;InbreedingCoeff=-0.2819;MQ=46.26;MQ0=3;MQRankSum=-3.805;QD=10.89;ReadPosRankSum=-1.517;VQSLOD=3.3367;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:3,2:5:47.80:109,0,48	0/0:3,0:3:5.33:0,5,15	0/0:10,0:2:6.02:0,6,84	0/0:14,0:6:5.92:0,6,42	0/0:10,0:10:13.35:0,13,52	0/0:10,0:10:15.93:0,16,82	0/0:1,0:1:2.22:0,2,7	0/0:25,0:23:63.21:0,63,712	0/0:1,0:1:3.01:0,3,31	0/1:7,1:8:26.81:27,0,215	0/0:3,0:3:9.01:0,9,106	0/1:2,1:5:37.55:38,0,76	0/1:2,1:4:59.72:60,0,72	0/1:3,1:4:67.31:67,0,71	0/1:3,1:4:31.14:31,0,36	0/0:1,0:1:3.01:0,3,41	0/1:9,4:13:99:232,0,165	0/1:4,3:7:26.50:127,0,27	./.	0/0:2,0:2:6.02:0,6,84	0/0:2,0:2:6.02:0,6,84	./.	./.	1/1:0,1:1:2.92:17,3,0	0/1:12,4:17:99:141,0,324	0/1:4,1:5:32.48:32,0,157	0/0:10,0:10:30.08:0,30,399	0/1:1,2:3:32.78:85,0,33
chr10	31768353	.	T	TG	474.32	PASS	AB=1.000;AC=15;AF=0.300;AN=50;BaseQRankSum=1.262;DP=167;FS=16.261;HRun=0;HaplotypeScore=84.7846;InbreedingCoeff=0.4799;MQ=41.01;MQ0=3;MQRankSum=-2.511;QD=9.49;ReadPosRankSum=3.529;VQSLOD=2.8707;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:5,0:5:5.87:6,0,67	1/1:2,1:3:8.60:59,9,0	./.	0/0:10,0:3:3.01:0,3,42	1/1:7,4:11:20.67:181,21,0	1/1:4,6:10:29.55:251,30,0	1/1:2,0:2:2.80:13,3,0	0/0:27,0:25:62.58:0,63,726	1/1:0,1:1:3.01:31,3,0	0/0:8,0:8:18.04:0,18,233	0/0:3,0:3:9.01:0,9,104	0/0:7,0:7:17.98:0,18,189	0/0:4,0:4:11.79:0,12,101	0/0:4,0:4:10.54:0,11,106	0/1:4,0:4:4.65:5,0,30	0/0:1,0:1:3.01:0,3,40	0/1:13,0:13:62.71:63,0,221	0/0:7,0:7:13.27:0,13,98	0/0:1,0:1:2.04:0,2,6	0/0:2,0:2:6.02:0,6,83	0/0:2,0:2:6.02:0,6,81	./.	./.	1/1:1,0:1:2.98:21,3,0	0/0:16,0:16:40.83:0,41,456	0/0:6,0:6:14.78:0,15,134	0/0:7,0:7:21.07:0,21,284	0/0:3,0:3:8.85:0,9,77
chr10	31768355	.	AT	A	1027.32	PASS	AB=1.000;AC=31;AF=0.620;AN=50;BaseQRankSum=0.302;DP=162;FS=2.585;HRun=3;HaplotypeScore=81.5363;InbreedingCoeff=0.0236;MQ=35.98;MQ0=3;MQRankSum=-0.175;QD=7.55;ReadPosRankSum=3.870;VQSLOD=1.0906;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:4:7.09:0,7,49	1/1:3,0:3:3.31:10,3,0	./.	0/0:9,0:1:3.01:0,3,32	1/1:11,0:11:14.72:69,15,0	1/1:10,0:10:22:91,22,0	1/1:2,0:2:0.47:1,0,0	0/1:25,0:23:98.83:99,0,230	1/1:1,0:1:1.82:5,2,0	0/1:8,0:8:2.84:87,0,3	1/1:4,0:4:4.73:15,5,0	0/1:7,0:7:34.27:69,0,34	0/1:4,0:4:2.76:35,0,3	0/1:4,0:4:10.67:15,0,11	1/1:1,3:4:12.01:134,12,0	1/1:1,0:1:2.98:22,3,0	0/1:14,0:14:38.74:99,0,39	0/1:7,0:7:19.44:31,0,19	0/0:1,0:1:2.04:0,2,6	1/1:2,0:2:5.91:39,6,0	1/1:2,0:2:5.97:44,6,0	./.	./.	0/0:1,0:1:1.82:0,2,5	0/1:15,0:15:68:124,0,68	0/1:5,0:5:29.22:29,0,50	1/1:6,1:7:20.65:151,21,0	0/0:3,0:3:6.05:0,6,28
chr10	31768357	.	TG	T	2556.57	PASS	AB=0.711;AC=32;AF=0.640;AN=50;BaseQRankSum=-0.998;DP=156;FS=14.818;HRun=1;HaplotypeScore=73.1041;InbreedingCoeff=-0.1424;MQ=35.30;MQ0=3;MQRankSum=-0.086;QD=19.37;ReadPosRankSum=2.911;VQSLOD=2.6063;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:4:1.40:0,1,47	1/1:2,1:3:7.45:44,7,0	./.	0/0:10,0:1:3.01:0,3,33	1/1:3,8:11:22.74:202,23,0	1/1:1,9:10:28.24:232,28,0	1/1:1,1:2:5.19:27,5,0	0/1:12,11:21:99:396,0,241	1/1:0,1:1:3:25,3,0	0/1:4,4:8:18.90:197,0,19	1/1:1,1:2:3:37,3,0	0/1:5,2:7:68.04:146,0,68	0/1:2,1:3:18.03:75,0,18	0/1:2,2:4:34.58:48,0,35	1/1:4,0:4:11.98:117,12,0	1/1:0,1:1:3.01:42,3,0	0/1:7,6:13:84.45:229,0,84	0/1:6,2:8:67.20:67,0,78	0/0:2,0:2:4.07:0,4,12	1/1:0,2:2:6.02:84,6,0	1/1:0,2:2:6.02:84,6,0	./.	./.	0/0:1,0:1:0:0,0,0	0/1:7,7:14:99:279,0,104	0/1:2,2:4:55.28:72,0,55	1/1:2,5:7:21.07:285,21,0	0/1:2,1:3:10.30:10,0,50
chr10	31768362	.	TTATTTATTG	T	3829.37	PASS	AB=1.000;AC=40;AF=0.833;AN=48;BaseQRankSum=-2.707;DP=169;FS=0.000;HRun=0;HaplotypeScore=100.1041;InbreedingCoeff=0.0939;MQ=36.34;MQ0=4;MQRankSum=0.202;QD=25.53;ReadPosRankSum=-1.766;VQSLOD=2.6176;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:6:13.09:208,13,0	0/1:3,0:3:27.24:75,0,27	./.	0/0:11,0:1:2.22:0,2,7	1/1:10,0:10:13.93:175,14,0	0/1:11,0:11:30.44:168,0,30	1/1:2,0:2:5.98:62,6,0	1/1:25,0:23:39.47:221,39,0	1/1:1,0:1:2.99:24,3,0	1/1:5,2:7:21.06:402,21,0	1/1:1,2:3:8.99:114,9,0	1/1:7,0:7:20.81:248,21,0	1/1:3,0:3:8.97:115,9,0	1/1:4,0:4:8.99:95,9,0	0/1:4,0:4:0.30:114,0,0	./.	1/1:16,0:17:38.59:555,39,0	1/1:9,0:9:23.64:339,24,0	1/1:4,0:4:0.30:7,0,0	1/1:3,0:3:3.01:43,3,0	1/1:2,0:2:6.02:84,6,0	./.	./.	0/0:1,0:1:0.89:0,1,2	1/1:14,0:14:32.93:423,33,0	1/1:4,0:4:12.04:150,12,0	0/1:7,0:7:50.94:94,0,51	1/1:4,0:4:9:115,9,0
chr10	31768366	.	T	TG	1080.39	PASS	AB=0.747;AC=17;AF=0.340;AN=50;BaseQRankSum=0.228;DP=170;FS=14.664;HRun=0;HaplotypeScore=88.0192;InbreedingCoeff=-0.1426;MQ=35.85;MQ0=4;MQRankSum=-0.746;QD=12.71;ReadPosRankSum=-0.345;VQSLOD=3.4195;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:3,3:7:13.64:144,0,14	0/0:3,0:3:9.03:0,9,118	./.	0/0:11,0:1:3.01:0,3,40	0/0:8,0:10:20.91:0,21,237	0/0:8,0:11:32.75:0,33,364	0/0:2,0:2:6.02:0,6,81	0/0:26,0:24:70.56:0,71,756	0/0:1,0:1:3.01:0,3,42	0/1:6,1:7:82.50:82,0,140	0/1:3,0:3:11.50:11,0,17	0/1:4,3:7:72.57:73,0,74	0/1:2,1:3:31.76:34,0,32	0/1:2,2:4:31.27:48,0,31	0/1:3,1:4:24.24:24,0,81	./.	0/1:9,7:17:99:246,0,133	0/1:4,6:10:51.89:207,0,52	0/0:4,0:4:11.97:0,12,136	0/0:3,0:3:9.03:0,9,114	0/0:2,0:2:6.02:0,6,81	1/1:1,0:1:2.99:24,3,0	./.	1/1:0,1:1:2.97:20,3,0	0/1:8,5:13:99:160,0,181	0/1:2,2:4:63.92:64,0,69	0/0:6,0:6:18.06:0,18,245	1/1:1,3:4:9:92,9,0
chr10	31768370	.	TG	T	4728.09	PASS	AB=0.571;AC=45;AF=0.900;AN=50;BaseQRankSum=0.236;DP=164;FS=2.958;HRun=1;HaplotypeScore=69.5780;InbreedingCoeff=0.3012;MQ=36.15;MQ0=4;MQRankSum=0.007;QD=32.38;ReadPosRankSum=1.750;VQSLOD=4.6323;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,5:7:18.90:188,19,0	1/1:0,3:3:9.03:117,9,0	./.	0/0:10,0:1:3:0,3,28	1/1:2,6:8:21.07:281,21,0	1/1:3,6:9:27.08:354,27,0	1/1:0,2:2:6.02:84,6,0	1/1:1,24:24:71.22:928,71,0	1/1:0,1:1:3.01:42,3,0	1/1:2,5:7:21.04:253,21,0	1/1:2,0:2:5.98:61,6,0	1/1:2,5:7:20.96:220,21,0	1/1:1,2:3:8.97:88,9,0	1/1:1,3:4:11.98:114,12,0	1/1:4,2:6:10.27:114,10,0	./.	1/1:5,11:16:41.35:403,41,0	1/1:2,9:11:29.63:306,30,0	0/1:1,3:4:32.39:113,0,32	1/1:1,2:3:6.02:84,6,0	1/1:0,2:2:6.02:84,6,0	1/1:0,1:1:3.01:41,3,0	./.	0/0:0,1:1:1.55:0,2,4	1/1:2,8:10:30.03:333,30,0	1/1:0,4:4:12.04:148,12,0	1/1:0,6:6:18.06:248,18,0	1/1:2,3:5:14.94:127,15,0
chr10	31768396	.	T	TATTC	3008.10	PASS	AB=1.000;AC=32;AF=0.593;AN=54;BaseQRankSum=1.008;DP=239;FS=6.837;HRun=0;HaplotypeScore=83.9808;InbreedingCoeff=0.0250;MQ=58.06;MQ0=0;MQRankSum=-3.054;QD=14.60;ReadPosRankSum=7.031;VQSLOD=2.0509;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:12,0:12:99:125,0,108	1/1:1,1:2:6.01:91,6,0	0/0:11,0:8:17.99:0,18,172	0/0:4,0:3:2.19:0,2,63	1/1:8,2:10:29.55:351,30,0	1/1:7,2:9:24.04:382,24,0	1/1:3,0:3:9.01:89,9,0	1/1:27,0:27:56.72:576,57,0	1/1:5,0:5:14.93:118,15,0	0/1:9,0:9:76.93:77,0,133	0/1:10,0:10:12.29:12,0,186	0/1:11,0:11:22.01:22,0,94	0/1:5,0:5:7.87:8,0,47	0/0:7,0:7:3.04:0,3,95	0/0:7,0:7:1.40:0,1,130	./.	0/1:21,0:21:99:162,0,171	0/1:14,0:14:76.52:160,0,77	1/1:12,0:10:29.87:242,30,0	1/1:11,1:12:32.93:280,33,0	1/1:1,0:1:3:25,3,0	1/1:2,0:2:3.01:38,3,0	0/0:1,0:1:3:0,3,27	0/0:2,0:2:3:0,3,27	0/1:10,0:10:38.02:60,0,38	0/1:5,0:5:16.25:16,0,41	1/1:12,2:14:32.96:308,33,0	0/1:12,0:12:30.73:31,0,155
chr10	31768878	.	TCCAATGTGCAAAATGGGAG	T	1510.86	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.266;DP=663;FS=16.499;HRun=0;HaplotypeScore=337.2813;InbreedingCoeff=0.9902;MQ=75.51;MQ0=4;MQRankSum=-5.350;QD=88.87;ReadPosRankSum=1.050;VQSLOD=2.2620;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:96.33:0,96,6503	0/0:10,0:10:27.09:0,27,2261	0/0:9,0:9:18.03:0,18,888	0/0:19,0:19:47.99:0,48,1888	0/0:25,0:25:69.24:0,69,6053	0/0:16,0:16:48.16:0,48,4095	0/0:26,0:26:66.23:0,66,5222	0/0:28,0:28:81.26:0,81,5394	0/0:28,0:28:81.28:0,81,6396	0/0:38,0:38:99:0,114,9335	0/0:28,0:27:81.28:0,81,7100	0/0:13,0:13:36.12:0,36,2519	0/0:26,0:25:69.24:0,69,6004	0/0:17,0:17:51.18:0,51,4496	1/1:5,12:17:30.10:1605,30,0	0/0:22,0:22:60.21:0,60,4752	0/0:27,0:27:81.28:0,81,7089	0/0:15,0:15:45.15:0,45,3736	0/0:26,0:26:66.19:0,66,4461	0/0:26,0:26:69.24:0,69,5735	0/0:33,0:33:96.31:0,96,8206	0/0:29,0:28:81.25:0,81,6567	0/0:27,0:27:74.82:0,75,6271	0/0:39,0:39:99:0,108,8230	0/0:13,0:12:36.12:0,36,2932	0/0:26,0:26:75.26:0,75,5830	0/0:25,0:24:72.25:0,72,5552	0/0:13,0:13:39.03:0,39,2189
chr10	31768938	.	ACT	A	13883.88	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=12.259;DP=678;FS=7.677;HRun=0;HaplotypeScore=91.4824;InbreedingCoeff=0.9998;MQ=86.12;MQ0=5;MQRankSum=-1.131;QD=39.44;ReadPosRankSum=7.968;VQSLOD=6.1725;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,39:39:93.31:1370,93,0	0/0:11,0:11:33.11:0,33,617	0/0:24,0:24:72.23:0,72,1288	0/0:25,0:25:72.17:0,72,1219	0/0:32,0:32:87.26:0,87,1545	0/0:21,0:21:57.20:0,57,1059	0/0:27,0:27:81.28:0,81,1502	0/0:27,0:27:81.23:0,81,1481	0/0:25,0:25:72.23:0,72,1309	1/1:2,24:26:72.24:1059,72,0	1/1:1,24:24:69.23:1016,69,0	1/1:1,20:21:60.20:884,60,0	1/1:1,22:22:54.18:794,54,0	1/1:0,22:22:60.20:884,60,0	0/0:18,0:18:51.17:0,51,953	1/1:1,21:22:57.19:840,57,0	1/1:1,25:26:75.25:1105,75,0	1/1:0,14:14:42.14:619,42,0	0/0:21,0:21:57.19:0,57,1035	0/0:30,0:30:87.30:0,87,1609	0/0:37,0:37:99:0,108,2015	1/1:1,24:24:66.22:972,66,0	1/1:0,31:31:84.28:1230,84,0	1/1:0,24:24:66.22:972,66,0	1/1:0,11:10:27.09:398,27,0	1/1:0,26:25:75.24:1081,75,0	0/0:28,0:27:81.28:0,81,1510	1/1:0,17:17:45.15:663,45,0
chr10	31769223	.	G	GTAAAAA	16200.35	PASS	AB=0.586;AC=19;AF=0.339;AN=56;BaseQRankSum=15.702;DP=566;FS=4.561;HRun=0;HaplotypeScore=139.8050;InbreedingCoeff=0.9131;MQ=59.86;MQ0=0;MQRankSum=-15.231;QD=83.51;ReadPosRankSum=-3.088;VQSLOD=4.8255;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:87.24:0,87,1975	1/1:1,5:6:15.05:536,15,0	0/0:23,0:22:66.12:0,66,1361	0/0:20,0:20:45.14:0,45,986	1/1:6,18:25:66.22:1964,66,0	1/1:7,23:30:84.29:2895,84,0	1/1:5,15:20:54.19:1890,54,0	1/1:13,7:23:63.22:1950,63,0	0/1:5,12:17:28.24:1447,0,28	0/0:26,0:26:75.25:0,75,1768	0/0:30,0:30:84.29:0,84,2032	0/0:16,0:16:45.14:0,45,1052	0/0:17,0:17:51.14:0,51,1195	0/0:16,0:16:45.12:0,45,1048	0/0:25,0:25:75.24:0,75,1762	0/0:6,0:6:15.04:0,15,320	0/0:19,0:19:54.19:0,54,1297	0/0:17,0:17:51.11:0,51,1087	1/1:5,7:18:45.14:1302,45,0	1/1:6,14:23:66.22:1888,66,0	1/1:3,2:5:15.05:469,15,0	0/0:21,0:21:60.21:0,60,1421	0/0:19,0:19:57.20:0,57,1319	0/0:25,0:25:75.21:0,75,1757	0/0:22,0:22:66.23:0,66,1591	0/0:26,0:26:72.25:0,72,1761	1/1:6,14:25:54.19:1859,54,0	0/0:13,0:13:39.13:0,39,954
chr10	31769358	.	C	CTT	10613.15	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-4.171;DP=625;FS=11.528;HRun=10;HaplotypeScore=104.5514;InbreedingCoeff=0.8685;MQ=66.10;MQ0=2;MQRankSum=-0.940;QD=17.75;ReadPosRankSum=4.518;VQSLOD=2.3732;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,3:36:48.95:490,49,0	1/1:0,7:8:20.51:237,21,0	0/0:14,0:13:15.72:0,16,129	0/0:13,0:8:10.33:0,10,74	1/1:5,25:32:75.02:875,75,0	1/1:4,18:23:42.11:601,42,0	1/1:4,16:20:38.53:490,39,0	1/1:36,0:35:86.59:772,87,0	1/1:6,9:16:35.97:473,36,0	1/1:8,0:27:47.09:365,47,0	1/1:9,0:27:44.44:385,44,0	1/1:3,1:15:15.02:157,15,0	1/1:3,0:10:5.68:56,6,0	1/1:7,0:22:29.99:271,30,0	1/1:2,0:32:62.38:219,62,0	1/1:4,3:9:11.65:169,12,0	1/1:3,2:32:57.05:549,57,0	1/1:4,0:15:26.52:237,27,0	1/1:5,0:5:11.99:106,12,0	1/1:41,0:41:95.77:878,96,0	1/1:17,0:17:36.04:340,36,0	1/1:4,0:17:30.43:266,30,0	1/1:3,1:24:38.91:358,39,0	1/1:4,1:27:41.93:401,42,0	1/1:1,2:18:15.15:207,15,0	1/1:12,2:36:70.63:648,71,0	1/1:32,0:32:75.12:745,75,0	1/1:6,2:20:30.05:317,30,0
chr10	31769365	.	T	TTG	6308.68	PASS	AB=0.997;AC=24;AF=0.429;AN=56;BaseQRankSum=-9.496;DP=606;FS=7.072;HRun=0;HaplotypeScore=108.9781;InbreedingCoeff=0.1312;MQ=61.52;MQ0=3;MQRankSum=-4.603;QD=15.46;ReadPosRankSum=1.606;VQSLOD=4.2142;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:38,0:38:1.51:2,0,134	0/1:8,0:8:8.14:68,0,8	0/0:13,0:10:18.92:0,19,230	0/0:11,0:7:16.30:0,16,133	0/1:32,0:32:79.34:233,0,79	1/1:20,0:20:22.17:258,22,0	0/1:19,0:19:1.56:162,0,2	1/1:3,33:35:99:1541,99,0	0/1:17,0:17:37.02:141,0,37	0/1:23,0:25:4.72:5,0,201	0/0:27,0:27:8.52:0,9,179	0/1:14,0:14:12:12,0,49	0/0:8,0:8:2.14:0,2,19	0/0:18,0:18:5.64:0,6,18	0/0:32,0:32:67.91:0,68,272	0/1:12,0:12:28.64:29,0,89	0/1:36,0:36:6.64:7,0,120	0/0:12,0:12:8.50:0,8,34	1/1:0,6:6:15.04:232,15,0	1/1:0,36:38:99:1666,105,0	1/1:0,15:15:36.12:622,36,0	0/0:16,0:16:2.20:0,2,67	0/1:23,0:23:5.44:15,0,5	0/0:27,0:27:1.21:0,1,47	0/1:18,0:18:8.94:9,0,33	0/0:32,0:32:6.41:0,6,186	1/1:0,31:32:75.26:1292,75,0	0/1:19,0:19:15.95:16,0,93
chr10	31769846	.	G	GT	2889.09	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-10.325;DP=639;FS=0.884;HRun=7;HaplotypeScore=63.3852;InbreedingCoeff=0.9901;MQ=78.25;MQ0=0;MQRankSum=-1.663;QD=27.00;ReadPosRankSum=1.258;VQSLOD=4.3832;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,108,1035	1/1:1,9:10:27.08:326,27,0	0/0:24,1:24:30.23:0,30,491	0/0:17,0:16:10.87:0,11,309	1/1:5,18:23:45.10:527,45,0	1/1:3,24:27:57.17:689,57,0	1/1:2,14:16:39.12:471,39,0	0/0:27,0:27:68.95:0,69,651	1/1:1,30:31:87.27:1051,87,0	0/0:28,0:28:57.08:0,57,550	0/0:14,0:14:36.02:0,36,339	0/0:32,0:32:90.14:0,90,869	0/0:18,0:18:54.09:0,54,521	0/0:29,0:29:78.11:0,78,753	0/0:23,0:22:60.07:0,60,572	0/0:20,1:21:26.85:0,27,538	0/0:20,0:20:51.07:0,51,493	0/0:18,0:18:33.04:0,33,319	0/0:16,0:16:42.05:0,42,402	0/0:32,0:32:93.15:0,93,898	0/0:24,0:24:63.10:0,63,608	0/0:24,0:24:63.10:0,63,608	0/0:19,0:19:51.05:0,51,482	0/0:20,0:20:60.07:0,60,572	0/0:21,0:21:54.08:0,54,522	0/0:24,0:24:53.57:0,54,516	0/0:26,0:26:69.11:0,69,666	0/0:14,0:14:39.06:0,39,377
chr10	31770835	.	C	CGT	553.01	PASS	AB=0.872;AC=9;AF=0.161;AN=56;BaseQRankSum=1.494;DP=311;FS=9.151;HRun=0;HaplotypeScore=63.8996;InbreedingCoeff=0.3031;MQ=51.70;MQ0=14;MQRankSum=-2.344;QD=7.58;ReadPosRankSum=1.454;VQSLOD=1.9447;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:19.94:0,20,158	0/0:3,0:3:9.03:0,9,134	0/0:38,0:8:20.79:0,21,198	0/0:32,0:5:15.05:0,15,207	0/0:9,0:9:21.07:0,21,306	0/0:17,0:17:36.12:0,36,534	0/0:6,0:6:18.04:0,18,214	0/0:14,0:14:26.04:0,26,88	0/0:13,0:13:30.10:0,30,425	0/0:7,0:7:7.86:0,8,42	0/0:10,0:11:20.20:0,20,140	0/0:6,0:6:13.58:0,14,122	0/0:5,0:5:5.99:0,6,52	0/0:6,0:6:9.01:0,9,81	0/1:13,0:13:31.11:51,0,31	0/0:1,0:1:3:0,3,29	0/1:6,18:24:41.20:379,0,41	0/0:9,0:9:20.60:0,21,162	0/1:8,0:8:27.67:28,0,28	1/1:4,0:7:4.60:47,5,0	0/1:8,1:9:0.71:54,0,1	1/1:1,2:4:9.02:115,9,0	0/0:6,0:6:11.95:0,12,92	0/0:5,0:5:11.99:0,12,106	0/0:14,0:16:31.28:0,31,211	0/0:10,0:10:17.88:0,18,121	0/1:7,0:8:7.20:18,0,7	0/0:10,0:11:30.20:0,30,225
chr10	31770836	.	ATG	A	621.22	PASS	AB=1.000;AC=11;AF=0.204;AN=54;BaseQRankSum=-1.733;DP=331;FS=3.736;HRun=0;HaplotypeScore=63.0821;InbreedingCoeff=0.6176;MQ=51.08;MQ0=15;MQRankSum=-0.624;QD=9.41;ReadPosRankSum=-0.206;VQSLOD=2.8001;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:15.05:0,15,226	1/1:1,2:3:9.02:100,9,0	./.	0/0:34,0:6:3.01:0,3,41	1/1:2,5:9:17.71:161,18,0	1/1:10,7:17:17.88:181,18,0	1/1:4,2:6:6.02:67,6,0	0/0:15,0:15:3.01:0,3,37	1/1:5,9:14:23.74:267,24,0	0/0:8,0:8:12.03:0,12,160	0/0:14,0:14:3.69:0,4,292	0/0:6,0:6:12.04:0,12,181	0/0:5,0:5:6.02:0,6,90	0/0:7,0:7:12.04:0,12,173	0/0:3,0:13:30.01:0,30,281	0/0:1,0:1:3.01:0,3,45	0/0:24,0:24:39.02:0,39,397	0/0:9,0:9:18.53:0,19,273	0/0:8,0:8:6.01:0,6,67	0/0:10,0:10:6:0,6,52	0/0:9,0:9:9.01:0,9,88	0/0:4,0:4:9:0,9,78	0/0:8,0:8:15.03:0,15,205	0/0:5,0:5:12.04:0,12,181	0/1:17,0:17:1.43:1,0,395	0/0:12,0:12:18.02:0,18,221	0/0:8,0:8:5.99:0,6,49	0/0:12,0:12:5.73:0,6,358
chr10	31771780	.	A	AC	17614.35	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=0.856;DP=677;FS=3.282;HRun=2;HaplotypeScore=84.5581;InbreedingCoeff=0.9954;MQ=45.34;MQ0=69;MQRankSum=-0.264;QD=30.06;ReadPosRankSum=2.504;VQSLOD=4.6356;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,50:46:96.24:1327,96,0	1/1:0,14:12:36.12:485,36,0	0/0:30,0:10:30.07:0,30,355	0/0:27,0:11:33.10:0,33,396	1/1:3,21:19:45.15:604,45,0	1/1:3,21:22:57.16:751,57,0	1/1:1,22:19:48.16:657,48,0	1/1:5,24:19:57.11:759,57,0	1/1:4,27:30:78.18:1008,78,0	1/1:0,17:15:45.13:628,45,0	1/1:1,20:16:27.09:386,27,0	1/1:3,21:23:51.17:732,51,0	1/1:3,21:21:54.18:776,54,0	1/1:2,24:22:48.16:689,48,0	0/0:34,0:34:99:0,99,1189	1/1:2,15:16:42.14:602,42,0	1/1:1,47:48:99:1808,126,0	1/1:0,13:11:33.11:475,33,0	1/1:3,10:9:24.05:324,24,0	1/1:3,17:19:33.11:473,33,0	1/1:1,20:21:53.92:777,54,0	1/1:0,18:15:33.11:474,33,0	1/1:1,14:12:21.07:300,21,0	1/1:0,24:23:57.19:819,57,0	1/1:1,25:23:51.17:730,51,0	1/1:1,25:21:57.19:820,57,0	1/1:1,26:21:63.21:906,63,0	1/1:2,8:9:21.07:302,21,0
chr10	31771976	.	C	CA	10227.60	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=7.664;DP=427;FS=3.391;HRun=2;HaplotypeScore=171.8559;InbreedingCoeff=0.8798;MQ=48.35;MQ0=31;MQRankSum=-7.058;QD=28.97;ReadPosRankSum=-0.614;VQSLOD=4.1518;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,20:22:48.06:625,48,0	1/1:1,8:8:18.06:259,18,0	0/0:24,0:5:11.70:0,12,112	0/0:20,0:6:5.50:0,6,44	1/1:0,19:15:33.45:405,33,0	1/1:1,11:11:30.02:385,30,0	1/1:0,13:13:32.90:358,33,0	1/1:4,17:17:45.14:624,45,0	1/1:3,13:16:36.10:498,36,0	1/1:3,24:23:66.22:943,66,0	1/1:0,9:9:21.03:278,21,0	1/1:0,12:12:24.05:322,24,0	1/1:1,13:13:29.97:381,30,0	1/1:5,8:13:20.98:255,21,0	0/0:30,0:30:81.25:0,81,1004	1/1:1,12:13:27.09:388,27,0	1/1:2,6:8:15.05:212,15,0	1/1:0,4:4:9.03:129,9,0	1/1:2,10:11:27.09:385,27,0	1/1:3,26:26:63.08:830,63,0	1/1:2,7:9:8.99:106,9,0	1/1:1,12:12:27.09:380,27,0	1/1:0,11:9:21.03:278,21,0	1/1:1,14:15:24.07:344,24,0	1/1:0,18:18:45.07:600,45,0	1/1:2,14:16:42.14:604,42,0	1/1:2,11:12:36.03:467,36,0	1/1:0,4:4:12.04:172,12,0
chr10	31771985	.	GTTTGAC	G	9592.44	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=9.432;DP=302;FS=10.473;HRun=0;HaplotypeScore=167.7418;InbreedingCoeff=0.7865;MQ=46.28;MQ0=31;MQRankSum=-6.004;QD=43.02;ReadPosRankSum=2.840;VQSLOD=4.4333;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,13:14:42.12:679,42,0	1/1:1,5:6:18.05:281,18,0	0/0:27,0:7:18.04:0,18,586	0/0:22,0:7:21.07:0,21,626	1/1:1,12:10:21.53:326,22,0	1/1:1,9:10:27.09:471,27,0	1/1:3,7:10:21.07:366,21,0	1/1:3,8:9:24.08:455,24,0	1/1:1,11:12:36.11:597,36,0	1/1:3,16:17:51.16:882,51,0	1/1:2,5:7:15.04:223,15,0	1/1:0,6:6:18.06:313,18,0	1/1:0,11:10:30.10:502,30,0	1/1:3,4:8:18.04:264,18,0	0/0:30,0:30:90.31:0,90,3361	1/1:1,8:9:27.08:428,27,0	1/1:0,1:1:3.01:49,3,0	1/1:0,2:2:6.02:110,6,0	1/1:0,3:3:9.03:169,9,0	1/1:1,19:17:48.15:781,48,0	1/1:1,1:2:3.01:37,3,0	1/1:1,5:6:18.05:282,18,0	1/1:1,5:5:15.03:226,15,0	1/1:0,8:8:21.07:329,21,0	1/1:1,13:14:36.12:621,36,0	1/1:2,10:12:33.10:551,33,0	1/1:0,11:10:30.10:538,30,0	1/1:0,2:2:6.02:113,6,0
chr10	31771996	.	T	TGC	9055.09	PASS	AC=48;AF=0.889;AN=54;BaseQRankSum=10.787;DP=370;FS=11.619;HRun=0;HaplotypeScore=244.8594;InbreedingCoeff=0.8996;MQ=48.05;MQ0=30;MQRankSum=-5.951;QD=32.81;ReadPosRankSum=2.483;VQSLOD=3.7550;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,13:18:51.16:668,51,0	1/1:2,4:7:21:256,21,0	0/0:31,0:11:29.63:0,30,392	0/0:30,0:14:39.12:0,39,561	1/1:5,12:14:23.67:291,24,0	1/1:4,9:13:33.10:418,33,0	1/1:1,7:8:24.07:291,24,0	1/1:12,8:18:54.10:726,54,0	1/1:2,11:13:39.12:494,39,0	1/1:5,16:19:57.13:720,57,0	1/1:3,5:8:21.06:273,21,0	1/1:2,6:8:24.08:327,24,0	1/1:1,11:11:33.03:394,33,0	1/1:3,4:7:20.85:242,21,0	0/0:31,0:31:93.32:0,93,1515	1/1:5,8:13:33.03:387,33,0	1/1:2,1:3:6.02:69,6,0	1/1:1,2:3:9.03:116,9,0	1/1:3,3:6:17.92:214,18,0	1/1:9,19:24:57.18:743,57,0	./.	1/1:4,5:9:27.08:372,27,0	1/1:4,5:8:21.06:261,21,0	1/1:1,8:9:24.07:302,24,0	1/1:3,13:16:42.13:538,42,0	1/1:3,10:13:39.07:459,39,0	1/1:1,11:11:33.10:412,33,0	1/1:1,2:3:6.02:81,6,0
chr10	31772042	.	T	TTGTTCCCTCTTGC	52977.39	PASS	AC=48;AF=0.889;AN=54;BaseQRankSum=11.951;DP=446;FS=3.188;HRun=0;HaplotypeScore=359.7063;InbreedingCoeff=0.8975;MQ=51.50;MQ0=4;MQRankSum=-11.419;QD=140.15;ReadPosRankSum=3.250;VQSLOD=4.6088;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,4:12:33.11:1582,33,0	1/1:6,2:8:21.07:1191,21,0	0/0:21,0:18:39.17:0,39,1580	0/0:22,0:19:57.16:0,57,1780	1/1:17,8:23:60.20:3276,60,0	1/1:7,5:12:30.10:1847,30,0	1/1:17,5:20:51.17:2756,51,0	1/1:24,0:20:51.05:1751,51,0	1/1:10,9:19:54.19:3154,54,0	1/1:19,7:25:72.20:4048,72,0	1/1:14,2:16:42.09:1965,42,0	1/1:6,5:12:36.12:1985,36,0	1/1:11,2:13:36.12:1996,36,0	1/1:9,10:19:51.17:2986,51,0	0/0:25,0:25:75.24:0,75,2889	1/1:6,8:14:39.13:2298,39,0	1/1:1,1:2:3.01:200,3,0	1/1:1,1:2:6.02:401,6,0	1/1:9,1:9:24.05:755,24,0	1/1:22,6:25:63.21:3547,63,0	./.	1/1:13,6:19:54.18:3141,54,0	1/1:15,4:19:45.15:2590,45,0	1/1:3,3:6:15.05:795,15,0	1/1:15,3:18:48.16:2885,48,0	1/1:14,3:17:48.16:2792,48,0	1/1:18,8:25:66.23:4064,66,0	1/1:5,2:7:18.06:973,18,0
chr10	31772051	.	A	AT	10958.09	PASS	AC=48;AF=0.889;AN=54;BaseQRankSum=10.333;DP=359;FS=3.575;HRun=1;HaplotypeScore=217.3054;InbreedingCoeff=0.8793;MQ=52.06;MQ0=17;MQRankSum=-10.243;QD=38.18;ReadPosRankSum=2.659;VQSLOD=4.2935;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,7:6:15.05:224,15,0	1/1:1,5:6:15.05:224,15,0	0/0:23,0:15:38.76:0,39,473	0/0:22,0:15:39.11:0,39,475	1/1:0,16:16:41.97:596,42,0	1/1:0,7:7:21.07:314,21,0	1/1:1,21:19:57.15:826,57,0	1/1:3,12:10:24.08:353,24,0	1/1:1,14:15:42.14:627,42,0	1/1:2,19:20:57.15:820,57,0	1/1:1,9:10:20.90:282,21,0	1/1:1,12:13:36.12:536,36,0	1/1:1,6:7:21.04:290,21,0	1/1:2,16:18:48.16:716,48,0	0/0:26,0:26:72.15:0,72,896	1/1:1,9:10:24.08:359,24,0	1/1:1,1:1:3.01:45,3,0	1/1:0,2:2:6.02:90,6,0	1/1:2,4:6:18.06:258,18,0	1/1:0,15:13:39.13:582,39,0	./.	1/1:2,16:19:48.16:700,48,0	1/1:1,13:14:36.12:537,36,0	1/1:1,4:5:12.04:170,12,0	1/1:2,12:14:36.12:535,36,0	1/1:0,11:11:33.11:493,33,0	1/1:1,23:25:72.24:1070,72,0	1/1:0,7:7:21.07:314,21,0
chr10	31772103	.	GT	G	8521.60	PASS	AC=50;AF=0.926;AN=54;BaseQRankSum=4.677;DP=403;FS=0.985;HRun=4;HaplotypeScore=269.4577;InbreedingCoeff=0.6570;MQ=32.76;MQ0=61;MQRankSum=-1.457;QD=24.92;ReadPosRankSum=0.715;VQSLOD=2.5314;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,10:11:24.07:287,24,0	1/1:0,9:9:26.91:301,27,0	./.	0/0:17,0:1:3.01:0,3,37	1/1:2,13:15:29.15:309,29,0	1/1:0,10:10:23.99:268,24,0	1/1:7,11:14:23.12:307,23,0	1/1:7,7:9:21.03:231,21,0	1/1:1,12:13:36.11:430,36,0	1/1:8,19:25:41.68:599,42,0	1/1:5,8:12:18.05:207,18,0	1/1:2,13:15:39.12:467,39,0	1/1:1,15:16:48.15:571,48,0	1/1:6,14:18:42.13:500,42,0	0/0:18,0:18:45.15:0,45,629	1/1:1,7:7:21.06:251,21,0	1/1:2,4:4:12.04:144,12,0	1/1:1,2:3:3.01:36,3,0	1/1:2,5:2:6.02:72,6,0	1/1:3,13:16:33.09:384,33,0	1/1:3,3:3:1.33:33,1,0	1/1:3,24:27:61.48:743,61,0	1/1:4,15:18:30.09:349,30,0	1/1:1,4:4:9.03:108,9,0	1/1:2,19:21:51.15:607,51,0	1/1:3,9:11:27.08:322,27,0	1/1:2,19:21:57.17:673,57,0	1/1:1,9:9:27.08:323,27,0
chr10	31772132	.	TC	T	9377.09	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=8.412;DP=426;FS=4.341;HRun=3;HaplotypeScore=315.6698;InbreedingCoeff=0.8229;MQ=39.44;MQ0=58;MQRankSum=-6.107;QD=26.12;ReadPosRankSum=0.842;VQSLOD=3.0310;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,14:14:36.04:405,36,0	1/1:1,8:9:24.01:275,24,0	0/0:24,0:1:3.01:0,3,37	0/0:19,0:4:12.04:0,12,162	1/1:3,20:22:38.80:405,39,0	1/1:0,16:16:48.15:578,48,0	1/1:1,9:8:21.06:246,21,0	1/1:7,2:3:6.02:74,6,0	1/1:2,13:15:39.05:453,39,0	1/1:2,23:24:61.40:726,61,0	1/1:1,16:16:36:379,36,0	1/1:3,9:12:30.04:347,30,0	1/1:1,12:13:39.06:444,39,0	1/1:3,15:16:45.09:518,45,0	0/0:24,0:24:63.20:0,63,889	1/1:2,11:12:30.09:361,30,0	1/1:2,5:5:14.98:164,15,0	1/1:0,2:2:6.02:74,6,0	1/1:2,9:6:18.06:222,18,0	1/1:1,16:17:45.05:498,45,0	1/1:2,8:8:14.90:140,15,0	1/1:1,27:28:71.70:700,72,0	1/1:1,22:23:50.95:538,51,0	1/1:1,5:5:11.97:123,12,0	1/1:0,19:19:57.01:628,57,0	1/1:1,13:13:36.08:428,36,0	1/1:3,16:19:44.93:468,45,0	1/1:4,5:8:15.05:184,15,0
chr10	31772143	.	C	CG	8754.52	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=9.019;DP=327;FS=5.180;HRun=0;HaplotypeScore=233.9198;InbreedingCoeff=0.7696;MQ=45.32;MQ0=51;MQRankSum=-7.268;QD=34.33;ReadPosRankSum=2.389;VQSLOD=3.9008;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,10:10:27.08:341,27,0	1/1:0,4:4:12.04:173,12,0	0/0:21,0:1:3.01:0,3,33	0/0:22,0:6:17.97:0,18,176	1/1:3,17:19:48.04:611,48,0	1/1:0,15:15:45.15:584,45,0	1/1:1,9:8:24.08:302,24,0	1/1:5,2:2:6.02:78,6,0	1/1:0,10:10:30.10:384,30,0	1/1:0,20:20:45.60:722,46,0	1/1:1,13:13:33.11:451,33,0	1/1:0,4:4:12.04:153,12,0	1/1:0,8:8:24.08:306,24,0	1/1:2,12:12:35.98:443,36,0	0/0:29,0:29:75.25:0,75,1034	1/1:1,11:11:33.11:423,33,0	1/1:2,3:3:9.03:116,9,0	1/1:0,1:1:3.01:39,3,0	1/1:1,5:4:12.04:147,12,0	1/1:0,14:14:42.14:553,42,0	1/1:2,5:5:15.05:190,15,0	1/1:1,14:15:42.11:540,42,0	1/1:0,18:18:51.17:679,51,0	1/1:1,3:3:9.03:113,9,0	1/1:0,14:14:42.14:570,42,0	1/1:0,8:7:21.07:271,21,0	1/1:1,7:8:24.08:314,24,0	1/1:1,6:6:18.06:251,18,0
chr10	31772146	.	TG	T	746.71	PASS	AB=0.556;AC=49;AF=0.875;AN=56;BaseQRankSum=7.963;DP=323;FS=4.490;HRun=2;HaplotypeScore=262.2772;InbreedingCoeff=0.5128;MQ=45.61;MQ0=46;MQRankSum=-4.904;QD=2.93;ReadPosRankSum=3.730;VQSLOD=0.1218;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:0,10:10:9.89:30,10,0	1/1:0,4:4:8.85:28,9,0	0/0:18,0:1:3.01:0,3,45	0/0:22,0:6:18.05:0,18,241	0/1:4,16:19:9.34:9,0,39	1/1:0,15:15:24.33:65,24,0	1/1:1,9:8:11.32:29,11,0	1/1:5,2:2:4.26:13,4,0	1/1:1,10:11:16.21:42,16,0	1/1:0,20:20:11.12:106,11,0	1/1:1,13:13:16.56:42,17,0	1/1:0,4:4:5.91:14,6,0	1/1:0,8:8:1.47:19,1,0	1/1:2,12:12:16.42:44,16,0	0/0:28,0:28:75.25:0,75,1120	1/1:2,11:12:14.50:38,15,0	1/1:1,3:3:6.41:20,6,0	1/1:0,1:1:2.22:7,2,0	1/1:1,5:4:8.18:26,8,0	1/1:0,14:14:21.15:59,21,0	1/1:1,5:5:4.73:13,5,0	1/1:0,15:15:20.12:54,20,0	1/1:0,18:18:19.40:51,19,0	1/1:1,3:3:2.34:6,2,0	1/1:0,14:14:22.85:62,23,0	1/1:0,8:7:14.20:43,14,0	1/1:1,7:8:5.26:27,5,0	1/1:1,6:6:13.26:41,13,0
chr10	31772150	.	A	AT	9932.60	PASS	AB=1.000;AC=51;AF=0.911;AN=56;BaseQRankSum=9.197;DP=348;FS=3.778;HRun=0;HaplotypeScore=238.5903;InbreedingCoeff=0.6607;MQ=45.62;MQ0=46;MQRankSum=-7.607;QD=33.00;ReadPosRankSum=1.836;VQSLOD=4.0447;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,11:11:30.10:419,30,0	1/1:0,4:4:12.04:167,12,0	0/0:19,0:3:5.99:0,6,64	0/1:25,0:8:5.15:5,0,191	1/1:3,17:19:48.08:600,48,0	1/1:0,15:15:45.15:646,45,0	1/1:3,9:10:24.08:339,24,0	1/1:6,3:3:6.02:89,6,0	1/1:0,12:12:30.10:433,30,0	1/1:1,23:24:68.39:913,68,0	1/1:1,14:13:33.11:460,33,0	1/1:2,4:6:12.04:172,12,0	1/1:0,8:8:24.07:328,24,0	1/1:2,13:13:39.13:553,39,0	0/0:28,0:28:78.26:0,78,1090	1/1:1,12:12:33.11:480,33,0	1/1:2,3:4:12.04:171,12,0	1/1:0,2:2:6.02:88,6,0	1/1:0,5:4:12.04:178,12,0	1/1:0,14:14:42.14:596,42,0	1/1:2,5:6:15.05:213,15,0	1/1:0,15:15:42.14:577,42,0	1/1:0,19:19:54.18:754,54,0	1/1:1,3:3:9.03:126,9,0	1/1:1,14:15:42.14:598,42,0	1/1:0,11:10:30.09:421,30,0	1/1:0,8:8:24.08:349,24,0	1/1:1,6:6:18.06:257,18,0
chr10	31772450	.	CA	C	16076.67	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=6.486;DP=695;FS=13.917;HRun=7;HaplotypeScore=111.5343;InbreedingCoeff=0.9909;MQ=70.73;MQ0=2;MQRankSum=-2.563;QD=25.76;ReadPosRankSum=4.978;VQSLOD=3.5588;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,31:32:78.18:796,78,0	1/1:1,9:10:27.06:275,27,0	0/0:23,0:22:63.17:0,63,761	0/0:23,0:23:29.20:0,29,482	1/1:1,31:32:60.11:609,60,0	1/1:3,30:33:90.20:918,90,0	1/1:2,17:20:48.11:490,48,0	1/1:1,14:15:42.05:411,42,0	1/1:3,17:20:48.10:490,48,0	1/1:2,35:37:99:993,99,0	1/1:2,14:16:39.09:397,39,0	1/1:1,21:22:57.12:582,57,0	1/1:5,25:30:75.17:765,75,0	1/1:2,26:28:72.16:735,72,0	0/0:25,0:25:72.21:0,72,890	1/1:2,28:30:69.15:704,69,0	1/1:1,25:26:75.17:765,75,0	1/1:1,6:7:18.04:184,18,0	1/1:5,18:20:48.10:489,48,0	1/1:1,31:32:81.17:823,81,0	1/1:2,31:33:87.20:888,87,0	1/1:2,25:27:69.15:703,69,0	1/1:2,23:25:57.12:580,57,0	1/1:1,29:30:81.18:826,81,0	1/1:3,24:27:72.16:734,72,0	1/1:1,29:30:87.17:879,87,0	1/1:2,30:31:87.20:887,87,0	1/1:0,7:7:15.03:153,15,0
chr10	31773110	.	ACT	A	14163.99	PASS	AB=1.000;AC=51;AF=0.911;AN=56;BaseQRankSum=-1.683;DP=399;FS=7.211;HRun=0;HaplotypeScore=66.9088;InbreedingCoeff=0.7278;MQ=74.81;MQ0=3;MQRankSum=-3.253;QD=37.18;ReadPosRankSum=4.316;VQSLOD=7.0030;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,9:9:21.07:308,21,0	1/1:0,5:5:15.01:197,15,0	0/1:19,0:18:50.50:50,0,388	0/0:10,0:9:18.38:0,18,278	1/1:1,27:29:78.26:1148,78,0	1/1:0,12:12:30.10:441,30,0	1/1:0,5:5:6.02:88,6,0	1/1:0,33:33:99:1322,99,0	1/1:0,15:15:36.12:530,36,0	1/1:0,15:14:39.13:574,39,0	1/1:0,10:9:27.09:397,27,0	1/1:0,8:8:21.07:309,21,0	1/1:0,16:16:45.15:660,45,0	1/1:0,12:12:27.03:397,27,0	0/0:8,0:8:24.05:0,24,379	1/1:1,8:9:24.08:352,24,0	1/1:1,15:16:39.13:568,39,0	1/1:1,18:17:45.15:662,45,0	1/1:0,15:15:45.14:643,45,0	1/1:0,21:21:63.21:927,63,0	1/1:0,11:11:33.11:485,33,0	1/1:0,7:7:18.06:265,18,0	1/1:0,15:15:42.14:618,42,0	1/1:0,7:7:21.07:309,21,0	1/1:1,20:21:48.16:706,48,0	1/1:0,16:16:45.15:662,45,0	1/1:0,14:14:39.13:574,39,0	1/1:0,22:22:66.22:971,66,0
chr10	31773313	.	GA	G	6109.53	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=12.863;DP=449;FS=12.486;HRun=6;HaplotypeScore=68.4397;InbreedingCoeff=0.9947;MQ=79.27;MQ0=0;MQRankSum=-3.803;QD=27.90;ReadPosRankSum=2.829;VQSLOD=4.7072;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,11:12:30.07:322,30,0	0/0:5,0:5:15.05:0,15,197	0/0:13,0:13:36.01:0,36,422	0/0:9,0:9:18.06:0,18,236	0/0:29,0:29:75.23:0,75,972	0/0:23,0:23:66.20:0,66,854	0/0:10,0:10:27.09:0,27,355	0/0:41,0:41:99:0,108,1376	0/0:17,0:17:48.16:0,48,629	1/1:2,16:18:48.12:516,48,0	1/1:0,16:16:48.04:500,48,0	1/1:0,17:17:39.10:419,39,0	1/1:1,15:16:45.11:484,45,0	1/1:0,16:16:48.12:516,48,0	0/0:15,0:15:42.13:0,42,538	1/1:0,11:11:24.06:258,24,0	1/1:1,15:16:42.11:451,42,0	1/1:1,12:12:30.08:322,30,0	0/0:24,0:24:66.21:0,66,869	0/0:12,0:12:30.10:0,30,395	0/0:11,0:11:30.10:0,30,395	1/1:1,8:9:18.04:193,18,0	1/1:0,11:11:30.08:322,30,0	1/1:0,11:11:30.08:322,30,0	1/1:4,14:18:39.10:419,39,0	1/1:2,16:18:48.12:515,48,0	0/0:21,0:21:63.18:0,63,800	1/1:0,17:17:51.13:548,51,0
chr10	31775119	.	CAA	C	6514.77	PASS	AB=0.565;AC=32;AF=0.571;AN=56;BaseQRankSum=-12.495;DP=485;FS=8.620;HRun=12;HaplotypeScore=77.2178;InbreedingCoeff=0.8319;MQ=75.05;MQ0=4;MQRankSum=-3.721;QD=22.54;ReadPosRankSum=2.794;VQSLOD=4.1274;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,36:37:93.19:946,93,0	0/0:1,0:7:14.97:0,15,53	0/0:27,0:15:34.66:0,35,346	0/0:15,0:11:12.68:0,13,144	0/0:2,0:28:52.34:0,52,186	0/0:2,0:9:10.48:0,10,51	0/1:3,1:13:34.36:34,0,41	0/0:4,0:25:47.57:0,48,164	0/0:0,0:6:9.98:0,10,35	1/1:1,14:15:39.06:396,39,0	1/1:1,14:16:42.07:427,42,0	1/1:1,8:9:18.04:183,18,0	1/1:1,16:17:48.11:488,48,0	1/1:0,11:11:30.07:305,30,0	0/0:7,0:8:23.57:0,24,322	1/1:1,6:8:17.77:164,18,0	1/1:0,21:21:48.11:488,48,0	1/1:0,18:18:48.06:477,48,0	0/1:3,1:13:28.27:28,0,63	0/0:7,0:28:58.29:0,58,270	0/0:5,0:21:35.45:0,35,159	1/1:1,14:14:36.08:366,36,0	1/1:4,17:21:38.27:396,38,0	1/1:2,18:22:56.60:542,57,0	1/1:3,20:23:51.11:519,51,0	1/1:3,17:19:48.09:488,48,0	0/0:4,0:21:35.44:0,35,140	1/1:0,9:10:20.79:266,21,0
chr10	31776605	.	G	GTGAGTGAA	15533.92	PASS	AB=1.000;AC=31;AF=0.554;AN=56;BaseQRankSum=-14.137;DP=705;FS=0.766;HRun=0;HaplotypeScore=146.1204;InbreedingCoeff=0.8790;MQ=59.00;MQ0=10;MQRankSum=-13.446;QD=40.35;ReadPosRankSum=2.661;VQSLOD=4.6445;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,22:29:14.88:426,15,0	0/0:6,0:6:15.05:0,15,370	0/0:30,0:25:65.68:0,66,1001	0/0:38,0:35:66.27:0,66,1168	0/0:36,0:36:84.17:0,84,1773	0/0:31,0:30:81.18:0,81,1816	0/0:17,0:17:45.14:0,45,1129	0/0:28,0:25:69.08:0,69,1307	0/0:29,0:29:72.14:0,72,1760	1/1:9,21:29:63.21:2063,63,0	1/1:1,19:20:39:1424,39,0	1/1:3,21:20:21.07:893,21,0	1/1:2,19:19:26.96:1146,27,0	1/1:4,22:19:18.06:765,18,0	0/1:40,0:35:22.67:23,0,2231	1/1:4,21:22:23.82:1021,24,0	1/1:5,9:15:15.05:638,15,0	1/1:2,8:13:9.03:383,9,0	0/0:22,0:21:47.89:0,48,869	0/0:31,0:31:84.27:0,84,2118	0/0:25,0:25:63.18:0,63,1476	1/1:2,20:25:50.90:1746,51,0	1/1:3,16:24:20.26:797,20,0	1/1:4,15:19:8.99:275,9,0	1/1:3,25:30:54.18:2205,54,0	1/1:2,23:24:60.10:1660,60,0	0/0:26,0:25:57.14:0,57,1237	1/1:1,0:1:3.01:69,3,0
chr10	31777524	.	C	CT	8817.92	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-17.399;DP=612;FS=3.125;HRun=2;HaplotypeScore=71.9100;InbreedingCoeff=0.9983;MQ=84.86;MQ0=0;MQRankSum=-0.834;QD=39.19;ReadPosRankSum=-1.235;VQSLOD=4.9596;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:84.22:0,84,1002	1/1:0,14:14:42.14:605,42,0	0/0:24,0:25:55.41:0,55,693	0/0:16,0:15:33.10:0,33,406	1/1:1,27:28:78.26:1117,78,0	1/1:1,20:21:57.19:821,57,0	1/1:1,15:16:36.12:519,36,0	1/1:2,33:35:96.31:1363,96,0	1/1:1,16:17:45.15:648,45,0	0/0:25,0:25:75.23:0,75,920	0/0:30,0:30:90.28:0,90,1116	0/0:17,0:17:48.15:0,48,594	0/0:19,0:19:57.18:0,57,706	0/0:26,0:26:75.21:0,75,914	0/0:23,0:23:66.21:0,66,816	0/0:21,1:22:16.97:0,17,663	0/0:23,0:23:69.20:0,69,840	0/0:13,0:13:36.11:0,36,446	1/1:2,19:21:42.32:831,42,0	1/1:1,20:21:60.16:841,60,0	1/1:0,23:23:63.21:907,63,0	0/0:21,0:21:60.18:0,60,731	0/0:21,0:21:63.20:0,63,781	0/0:18,0:18:51.16:0,51,632	0/0:22,0:22:66.19:0,66,805	0/0:21,0:21:63.20:0,63,781	1/1:2,27:29:81.27:1167,81,0	0/0:13,0:13:33.10:0,33,409
chr10	31778302	.	T	TCTC	22582.21	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=8.195;DP=573;FS=2.814;HRun=0;HaplotypeScore=283.0720;InbreedingCoeff=0.9929;MQ=76.86;MQ0=0;MQRankSum=-10.832;QD=42.85;ReadPosRankSum=6.081;VQSLOD=5.1667;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,12:22:60.12:902,60,0	1/1:6,7:13:39.06:549,39,0	0/0:27,0:27:53.25:0,53,1077	0/0:19,0:19:57.18:0,57,906	1/1:9,12:21:36.05:549,36,0	1/1:6,15:21:60.12:962,60,0	1/1:7,10:17:48.06:740,48,0	1/1:14,6:20:60.19:1003,60,0	1/1:5,16:21:63.13:991,63,0	1/1:10,18:29:87.20:1444,87,0	1/1:5,9:14:33.01:504,33,0	1/1:9,20:29:83.67:1339,84,0	1/1:3,16:19:57.19:967,57,0	1/1:10,24:34:99:1612,99,0	1/1:4,19:23:66.13:1060,66,0	1/1:15,15:30:80.98:1229,81,0	1/1:5,8:13:30.10:507,30,0	1/1:5,7:12:30.09:514,30,0	1/1:8,10:18:51.07:850,51,0	1/1:8,11:19:48.10:724,48,0	1/1:8,5:13:17.98:250,18,0	1/1:5,18:23:60.14:981,60,0	1/1:5,10:16:36.11:592,36,0	1/1:10,9:19:44.89:556,45,0	1/1:9,18:26:75.13:1128,75,0	1/1:5,18:23:63.69:1121,64,0	1/1:3,21:23:69.23:1169,69,0	1/1:3,4:7:21.05:338,21,0
chr10	31778304	.	A	ATCTCCCAG	51329.96	PASS	AB=0.600;AC=51;AF=0.911;AN=56;BaseQRankSum=1.742;DP=591;FS=9.549;HRun=0;HaplotypeScore=219.6507;InbreedingCoeff=0.6968;MQ=76.06;MQ0=0;MQRankSum=-11.117;QD=94.18;ReadPosRankSum=8.098;VQSLOD=3.9475;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:15,12:27:27.85:2119,28,0	1/1:3,7:11:27.04:1021,27,0	0/0:25,0:25:60.60:0,61,1680	0/0:21,0:21:54.16:0,54,1412	1/1:12,12:24:27.77:1167,28,0	1/1:8,15:23:47.34:2334,47,0	1/1:6,10:18:48.16:1812,48,0	1/1:12,6:18:31.44:1563,31,0	1/1:4,15:20:57.20:2261,57,0	1/1:6,19:25:61.76:2432,62,0	1/1:5,9:15:33.11:1284,33,0	1/1:10,20:30:66.56:2970,67,0	1/1:6,16:22:66.23:2578,66,0	1/1:5,24:32:87.30:3261,87,0	1/1:7,19:26:75.26:2793,75,0	1/1:20,15:35:95.15:3501,95,0	1/1:7,8:15:33.11:1266,33,0	1/1:3,7:10:27.09:1008,27,0	1/1:6,10:16:45.15:1817,45,0	1/1:11,11:22:42.13:1504,42,0	1/1:5,5:12:0.03:579,0,0	1/1:3,17:24:57.87:2335,58,0	1/1:2,11:14:33.11:1308,33,0	1/1:9,9:18:1.20:1153,1,0	1/1:3,18:22:60.20:2268,60,0	1/1:12,17:30:83.76:3082,84,0	1/1:8,19:29:83.82:3443,84,0	0/1:2,4:6:1.15:469,0,1
chr10	31778661	.	GGGTCTTCCTGTATTTGTGGGTCTTGTAGTTGTT	G	3606.40	PASS	AC=46;AF=0.852;AN=54;BaseQRankSum=0.036;DP=569;FS=40.175;HRun=0;HaplotypeScore=384.9488;InbreedingCoeff=0.6042;MQ=55.18;MQ0=23;MQRankSum=0.382;QD=8.53;ReadPosRankSum=2.441;VQSLOD=1.1012;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:35,0:35:32.59:257,33,0	1/1:5,0:5:2.99:24,3,0	0/0:44,0:9:5.53:0,6,48	0/0:34,0:8:0:0,0,0	1/1:26,0:25:14.97:122,15,0	1/1:15,0:15:11.93:90,12,0	1/1:24,0:24:11.98:99,12,0	0/0:36,0:28:0:0,0,0	1/1:23,0:23:17.90:179,18,0	1/1:19,9:28:19.23:319,19,0	1/1:13,0:13:11.95:121,12,0	1/1:12,0:12:5.87:36,6,0	1/1:19,0:19:26.88:234,27,0	1/1:13,0:13:11.89:163,12,0	0/0:24,0:24:48.13:0,48,1264	1/1:16,0:15:18.01:256,18,0	1/1:14,0:14:5.88:36,6,0	1/1:19,0:19:8.97:162,9,0	1/1:25,0:21:8.98:159,9,0	1/1:19,0:19:14.82:107,15,0	1/1:20,0:20:17.88:194,18,0	1/1:9,0:9:8.96:121,9,0	1/1:20,0:20:14.99:204,15,0	1/1:15,0:15:14.87:187,15,0	1/1:17,0:17:9:78,9,0	1/1:14,0:13:15:236,15,0	1/1:22,0:21:26.82:227,27,0	./.
chr10	31778684	.	T	TTTC	4736	PASS	AB=0.811;AC=21;AF=0.375;AN=56;BaseQRankSum=8.869;DP=487;FS=88.356;HRun=0;HaplotypeScore=83.8635;InbreedingCoeff=-0.6015;MQ=53.95;MQ0=10;MQRankSum=-2.405;QD=13.57;ReadPosRankSum=-8.063;VQSLOD=-0.4804;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:29,9:39:99:654,0,1096	0/1:4,4:8:99:194,0,141	0/0:28,0:6:16.78:0,17,204	0/0:32,0:10:24.08:0,24,413	0/1:15,2:16:99:100,0,593	0/1:11,1:11:40.86:41,0,446	0/0:16,0:16:45.15:0,45,792	0/0:18,0:16:39.13:0,39,688	0/1:14,2:17:93.59:94,0,654	0/1:20,0:20:88.29:88,0,526	0/0:10,0:10:30.10:0,30,527	0/1:9,2:14:99:148,0,390	0/1:15,3:18:99:227,0,678	0/0:7,0:7:21.07:0,21,370	0/0:27,0:27:75.26:0,75,1323	0/1:11,5:17:99:349,0,423	0/1:10,4:14:99:270,0,284	0/1:10,5:15:99:317,0,298	0/1:13,1:12:99:133,0,423	0/1:15,3:18:99:196,0,686	0/1:16,1:18:99:187,0,587	0/1:7,5:14:99:324,0,204	0/1:14,3:17:99:167,0,587	0/1:5,9:14:99:327,0,184	0/1:8,2:11:96.62:97,0,366	0/1:13,3:15:99:299,0,381	0/1:22,2:23:99:272,0,844	0/1:6,4:10:99:253,0,247
chr10	31778793	.	T	TG	17749.25	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-7.652;DP=501;FS=15.386;HRun=0;HaplotypeScore=53.7696;InbreedingCoeff=0.9726;MQ=92.38;MQ0=0;MQRankSum=-9.386;QD=40.25;ReadPosRankSum=4.446;VQSLOD=3.5795;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,30:31:81.28:1290,81,0	1/1:0,5:5:12.04:192,12,0	0/0:31,0:31:81.01:0,81,1061	0/0:13,0:13:39.06:0,39,520	1/1:0,13:14:36.12:572,36,0	1/1:0,23:23:60.20:957,60,0	1/1:3,24:28:59.87:943,60,0	1/1:0,27:27:69.20:1016,69,0	1/1:0,10:10:24.08:382,24,0	1/1:1,14:15:42.08:618,42,0	1/1:1,7:10:21.46:305,21,0	1/1:1,17:19:51.17:813,51,0	1/1:0,15:15:39.13:616,39,0	1/1:1,14:15:42.14:665,42,0	0/0:16,0:16:45.14:0,45,608	1/1:0,14:14:42.14:670,42,0	1/1:2,31:33:90.31:1434,90,0	1/1:1,20:21:51.17:812,51,0	1/1:1,11:11:27.08:406,27,0	1/1:1,11:13:33.11:525,33,0	1/1:0,11:11:27.09:429,27,0	1/1:1,10:12:30.02:448,30,0	1/1:2,6:8:18.06:286,18,0	1/1:3,33:36:96.33:1512,96,0	1/1:3,12:15:39.11:585,39,0	1/1:0,18:18:54.17:837,54,0	1/1:0,30:30:78.27:1244,78,0	1/1:0,6:6:12.04:192,12,0
chr10	31778923	.	TAAA	T	4017.96	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-0.377;DP=501;FS=0.000;HRun=16;HaplotypeScore=80.6039;InbreedingCoeff=0.9547;MQ=58.59;MQ0=5;MQRankSum=0.250;QD=14.35;ReadPosRankSum=8.720;VQSLOD=1.4655;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,26:35:62.07:647,62,0	0/0:7,0:10:18.04:0,18,280	0/0:23,0:11:26.97:0,27,306	0/0:7,0:2:6.02:0,6,75	0/0:14,0:16:33.06:0,33,447	0/0:18,0:25:54.09:0,54,755	0/0:12,0:14:24.05:0,24,339	0/0:28,0:33:56.97:0,57,618	0/0:13,0:16:33:0,33,405	1/1:9,9:17:32.92:355,33,0	1/1:4,12:19:22.34:229,22,0	1/1:2,5:7:8.93:97,9,0	1/1:4,8:13:20.89:211,21,0	1/1:11,14:26:22.19:255,22,0	0/0:3,0:10:6.23:0,6,14	1/1:4,11:16:29.96:308,30,0	1/1:10,11:22:23.27:235,23,0	1/1:5,18:23:20.84:384,21,0	0/0:11,0:15:36.04:0,36,448	0/0:12,0:13:22.20:0,22,248	0/0:9,0:9:23.99:0,24,270	1/1:2,12:14:14.71:161,15,0	1/1:3,11:15:20.45:211,20,0	1/1:5,9:14:23.99:258,24,0	1/1:4,10:15:20.76:210,21,0	1/1:14,11:25:23.37:227,23,0	0/0:28,0:29:66.06:0,66,889	1/1:6,8:15:23.85:229,24,0
chr10	31781060	.	GTGTGTGTA	G	3075.53	PASS	AB=0.967;AC=39;AF=0.722;AN=54;BaseQRankSum=-7.796;DP=540;FS=7.708;HRun=0;HaplotypeScore=163.1122;InbreedingCoeff=0.0276;MQ=41.79;MQ0=22;MQRankSum=2.128;QD=6.32;ReadPosRankSum=-3.012;VQSLOD=0.9695;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:30,1:29:25:32,0,25	0/1:3,0:2:0:0,0,0	1/1:18,0:3:2.04:6,2,0	./.	0/0:19,0:18:5.99:0,6,72	0/0:9,0:9:5.99:0,6,71	0/1:29,0:30:0.11:0,0,0	1/1:10,0:10:7.86:127,8,0	0/1:17,0:17:91.17:91,0,102	0/1:17,1:18:46.37:199,0,46	1/1:22,1:23:11.47:139,11,0	0/1:22,2:24:51.27:182,0,51	1/1:12,1:13:7.10:90,7,0	0/1:21,1:20:4.70:39,0,5	0/1:22,0:20:1.49:39,0,1	1/1:8,1:9:3:25,3,0	0/1:25,0:25:17.28:291,0,17	1/1:23,1:22:22.53:346,23,0	1/1:15,0:14:15.17:140,15,0	1/1:17,0:17:23.46:177,23,0	1/1:36,0:31:19.55:212,20,0	1/1:18,4:20:8.47:73,8,0	1/1:19,0:18:5.95:43,6,0	1/1:20,1:21:8.67:128,9,0	1/1:25,1:25:17.96:191,18,0	0/1:14,1:13:21.45:245,0,21	1/1:10,1:10:17.34:175,17,0	0/1:15,1:16:6.58:228,0,7
chr10	31781062	.	GTGTGTA	G	3411.65	PASS	AB=0.947;AC=42;AF=0.778;AN=54;BaseQRankSum=-6.309;DP=523;FS=10.913;HRun=0;HaplotypeScore=150.5047;InbreedingCoeff=0.1123;MQ=41.87;MQ0=21;MQRankSum=1.686;QD=7.17;ReadPosRankSum=-2.272;VQSLOD=1.6987;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:30,3:31:8.01:36,0,8	0/1:3,0:2:0:0,0,0	1/1:15,0:3:4.72:17,5,0	./.	0/0:17,0:17:5.97:0,6,45	0/0:9,1:10:2.30:0,2,23	0/1:30,0:30:0.11:0,0,0	1/1:10,0:10:24.13:161,24,0	0/1:15,0:15:19.74:114,0,20	0/1:18,0:18:34.07:178,0,34	1/1:21,1:22:11.60:98,12,0	0/1:21,4:25:14.87:140,0,15	1/1:10,3:13:9.73:82,10,0	1/1:18,4:20:5.31:47,5,0	0/1:19,2:19:1.34:63,0,1	1/1:8,1:9:3:25,3,0	1/1:22,2:24:0.66:258,1,0	1/1:23,1:22:36.76:319,37,0	1/1:14,0:13:29.77:218,30,0	1/1:16,0:16:29.91:262,30,0	1/1:35,0:30:39.60:372,40,0	1/1:18,3:19:8.71:74,9,0	1/1:18,2:19:5.95:43,6,0	1/1:19,1:20:8.99:104,9,0	1/1:22,4:25:14.03:169,14,0	0/1:13,2:13:8.44:217,0,8	1/1:10,0:9:17.74:214,18,0	1/1:14,1:15:3.98:199,4,0
chr10	31781091	.	C	CGCGCGCGCGT	2731.14	PASS	AC=24;AF=0.444;AN=54;BaseQRankSum=1.865;DP=508;FS=2.226;HRun=0;HaplotypeScore=179.2460;InbreedingCoeff=0.7656;MQ=55.47;MQ0=5;MQRankSum=-6.342;QD=10.46;ReadPosRankSum=0.425;VQSLOD=2.8274;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:15,14:36:5.94:197,6,0	0/0:2,0:2:3.01:0,3,75	0/0:7,0:6:11.22:0,11,351	0/0:10,0:10:19.74:0,20,334	0/0:24,0:23:27.05:0,27,622	0/0:14,0:14:21.07:0,21,665	0/0:22,0:22:9.03:0,9,285	0/0:16,0:16:39.06:0,39,1031	0/0:16,0:16:36.10:0,36,938	1/1:6,13:23:23.74:607,24,0	0/0:19,0:19:1.41:0,1,3	1/1:11,0:28:15.05:346,15,0	1/1:5,0:15:2.90:63,3,0	1/1:12,0:19:5.93:175,6,0	0/0:21,0:20:20.99:0,21,260	./.	1/1:5,10:24:14.07:269,14,0	1/1:6,2:19:14.92:303,15,0	0/0:12,0:12:20.26:0,20,522	0/0:14,0:14:24.55:0,25,729	0/0:28,0:25:51.09:0,51,1265	1/1:19,0:19:5.37:80,5,0	1/1:3,0:18:0.47:1,0,0	0/0:4,6:19:0.47:0,0,1	1/1:7,0:17:1.65:30,2,0	1/1:4,10:22:32.54:625,33,0	0/0:14,0:14:33.08:0,33,765	1/1:5,0:16:9.03:222,9,0
chr10	31781872	.	C	CG	166.84	PASS	AC=8;AF=0.148;AN=54;BaseQRankSum=3.225;DP=527;FS=27.056;HRun=0;HaplotypeScore=78.5425;InbreedingCoeff=0.7553;MQ=42.36;MQ0=69;MQRankSum=-1.732;QD=7.25;ReadPosRankSum=-0.561;VQSLOD=1.5548;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:35:56.89:0,57,782	1/1:0,2:2:2.85:46,3,0	./.	0/0:26,0:3:5.97:0,6,73	0/0:3,0:1:0:0,0,0	1/1:6,1:3:2.28:41,2,0	1/1:9,2:6:8.60:123,9,0	0/0:42,0:40:99:0,102,1257	1/1:1,2:2:6.02:83,6,0	0/0:22,0:18:48.16:0,48,657	0/0:11,0:10:12.04:0,12,166	0/0:25,0:21:33.11:0,33,456	0/0:9,0:8:18.05:0,18,248	0/0:22,0:19:27.05:0,27,352	0/0:23,0:22:42.12:0,42,563	0/0:26,0:23:45.15:0,45,621	0/0:25,0:23:51.13:0,51,682	0/0:26,0:25:66.22:0,66,906	0/0:20,0:16:31.87:0,32,419	0/0:8,0:7:12.01:0,12,149	0/0:27,0:24:29.63:0,30,414	0/0:20,0:19:39.13:0,39,539	0/0:17,0:16:21.96:0,22,293	0/0:28,0:24:44.84:0,45,620	0/0:17,0:17:32.80:0,33,446	0/0:9,0:9:27.09:0,27,372	0/0:23,0:21:38.96:0,39,488	0/0:29,0:21:45.14:0,45,603
chr10	31781904	.	CTG	C	1294.32	PASS	AB=0.906;AC=12;AF=0.214;AN=56;BaseQRankSum=4.381;DP=647;FS=13.192;HRun=0;HaplotypeScore=106.4046;InbreedingCoeff=0.5709;MQ=77.38;MQ0=47;MQRankSum=-0.133;QD=4.67;ReadPosRankSum=-2.683;VQSLOD=0.8687;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:31:53.66:0,54,402	0/0:10,0:10:20.17:0,20,150	0/1:81,0:40:48.09:48,0,328	0/1:93,0:33:11.10:11,0,174	0/0:19,0:19:35.90:0,36,290	0/0:10,0:9:14.91:0,15,114	0/0:23,0:19:41.72:0,42,338	0/1:10,15:23:13.39:336,0,13	0/0:17,0:16:38.92:0,39,314	0/0:20,0:17:0.01:0,0,330	0/0:8,0:8:14.96:0,15,120	0/0:20,0:18:29.83:0,30,242	0/0:14,0:11:32.85:0,33,253	0/0:17,0:15:28.93:0,29,205	0/0:28,0:27:44.85:0,45,354	0/0:23,0:21:53.39:0,53,395	0/0:21,0:21:25.91:0,26,324	0/0:21,0:20:39.84:0,40,353	1/1:18,0:15:45.03:406,45,0	1/1:8,0:7:20.98:175,21,0	1/1:19,0:18:29.96:248,30,0	0/0:19,0:19:42.87:0,43,334	0/1:17,0:17:0.44:0,0,184	0/0:18,0:17:35.91:0,36,286	0/0:20,0:20:20.68:0,21,320	0/0:10,0:10:10.75:0,11,207	1/1:14,0:13:29.37:239,29,0	0/0:20,0:17:44.70:0,45,339
chr10	31783219	.	C	CT	389.23	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-5.085;DP=579;FS=0.000;HRun=7;HaplotypeScore=58.0554;InbreedingCoeff=0.9749;MQ=82.11;MQ0=0;MQRankSum=-2.288;QD=22.90;ReadPosRankSum=0.897;VQSLOD=3.5840;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,105,1001	0/0:6,0:6:18.03:0,18,174	0/0:13,0:13:27.04:0,27,261	0/0:19,0:19:26.38:0,26,238	0/0:30,0:30:87.06:0,87,822	0/0:23,0:23:63.10:0,63,608	0/0:17,0:17:48.08:0,48,463	0/0:28,0:28:66.08:0,66,632	0/0:25,0:25:69.11:0,69,666	0/0:25,0:25:63.09:0,63,608	0/0:16,0:16:39.03:0,39,369	0/0:19,0:19:54.09:0,54,522	0/0:11,0:11:33.05:0,33,319	0/0:17,0:17:45.07:0,45,435	1/1:1,16:17:16.16:478,16,0	0/0:22,0:22:66.11:0,66,637	0/0:29,0:29:78.10:0,78,746	0/0:18,0:18:48.04:0,48,455	0/0:27,0:27:61.11:0,61,597	0/0:16,0:16:42.06:0,42,405	0/0:16,0:16:36.05:0,36,348	0/0:16,0:16:45.04:0,45,427	0/0:19,0:19:57.09:0,57,550	0/0:22,0:22:66.09:0,66,632	0/0:28,0:28:78.09:0,78,744	0/0:22,0:22:63.10:0,63,608	0/0:28,0:28:84.14:0,84,811	0/0:10,0:10:24.04:0,24,232
chr10	31783868	.	A	AAACAAC	11521.92	PASS	AB=1.000;AC=44;AF=0.786;AN=56;BaseQRankSum=-6.016;DP=668;FS=9.692;HRun=0;HaplotypeScore=160.3780;InbreedingCoeff=0.4485;MQ=60.21;MQ0=4;MQRankSum=0.136;QD=20.91;ReadPosRankSum=4.908;VQSLOD=3.9425;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:15,16:31:11.32:390,11,0	1/1:11,0:15:33.01:407,33,0	0/0:28,0:19:7.25:0,7,69	0/0:25,0:20:12.02:0,12,138	1/1:1,0:41:15.05:309,15,0	1/1:0,0:28:3.01:83,3,0	1/1:12,0:20:27.09:417,27,0	0/0:38,0:38:34:0,34,584	1/1:1,1:28:3.01:83,3,0	1/1:11,19:31:59.87:1141,60,0	1/1:5,23:31:58.64:1679,59,0	1/1:2,11:17:30.10:922,30,0	1/1:9,12:25:18.06:585,18,0	1/1:4,11:15:15.05:489,15,0	0/0:5,0:26:44.94:0,45,599	1/1:7,15:23:15.04:489,15,0	1/1:6,11:18:9.03:293,9,0	1/1:12,0:15:8.99:116,9,0	0/1:22,0:21:59.76:60,0,60	0/1:25,0:25:99:144,0,102	0/1:10,0:10:26.93:27,0,65	1/1:11,7:19:18.04:409,18,0	1/1:7,19:27:32.29:983,32,0	1/1:10,10:21:9.03:293,9,0	1/1:2,12:15:18.06:587,18,0	1/1:7,16:26:48.08:1135,48,0	0/1:35,0:35:18.90:274,0,19	1/1:8,4:11:8.62:206,9,0
chr10	31783871	.	C	CAA	4569.90	PASS	AB=0.972;AC=29;AF=0.518;AN=56;BaseQRankSum=9.043;DP=631;FS=5.925;HRun=4;HaplotypeScore=146.3810;InbreedingCoeff=-0.0708;MQ=56.81;MQ0=4;MQRankSum=-9.767;QD=9.01;ReadPosRankSum=8.848;VQSLOD=0.3488;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:32,0:32:7.11:7,0,324	0/1:7,7:14:81.64:373,0,82	0/0:26,0:17:36.23:0,36,468	0/1:20,0:16:0.27:0,0,370	0/1:32,0:32:25.98:26,0,137	0/1:26,0:26:18.94:20,0,19	0/1:19,2:20:99:327,0,181	1/1:32,5:37:49.99:632,50,0	1/1:21,0:21:3:26,3,0	0/0:29,0:29:14.97:0,15,622	0/1:30,0:30:99:113,0,185	0/1:19,0:19:59.56:60,0,125	0/1:26,0:26:38.38:38,0,218	0/1:14,0:14:37.68:38,0,65	0/0:24,0:24:53.54:0,54,426	0/1:22,0:22:32.70:33,0,183	0/1:18,0:18:13.22:13,0,151	0/0:15,0:15:39.12:0,39,523	1/1:15,7:21:37.64:587,38,0	1/1:13,12:25:53.89:766,54,0	1/1:5,5:10:20.74:297,21,0	0/0:18,0:18:9.96:0,10,403	0/1:25,0:25:75.95:76,0,169	0/1:20,0:20:7.93:8,0,229	1/1:14,0:14:16.07:68,16,0	0/1:26,0:26:26.24:26,0,463	1/1:11,20:31:68.82:1036,69,0	0/0:12,0:11:2.48:0,2,232
chr10	31783873	.	AC	A	4502.34	PASS	AB=0.893;AC=13;AF=0.232;AN=56;BaseQRankSum=2.461;DP=623;FS=0.365;HRun=1;HaplotypeScore=137.2607;InbreedingCoeff=0.6521;MQ=56.00;MQ0=4;MQRankSum=-3.248;QD=25.01;ReadPosRankSum=-0.097;VQSLOD=4.5873;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:43.47:0,43,573	0/1:12,1:13:99:217,0,151	0/0:26,0:16:36.57:0,37,516	0/0:23,0:17:8.75:0,9,492	0/0:33,0:33:35.65:0,36,414	0/0:26,0:26:8.82:0,9,103	0/1:14,7:20:99:312,0,326	1/1:5,30:35:99:1424,105,0	0/0:18,0:18:2.80:0,3,13	0/0:29,0:29:84.17:0,84,1143	0/0:30,0:30:75.13:0,75,851	0/0:20,0:20:45.08:0,45,504	0/0:23,0:23:41.12:0,41,473	0/0:14,0:14:24.02:0,24,245	0/1:24,0:24:62.66:63,0,86	0/0:21,0:21:31.87:0,32,356	0/0:19,0:19:21.50:0,22,241	0/0:15,0:15:39.13:0,39,568	1/1:9,12:20:47.58:633,48,0	1/1:12,12:24:71.69:765,72,0	1/1:5,5:10:26.91:323,27,0	0/0:17,0:17:48.11:0,48,617	0/0:25,0:25:49.87:0,50,510	0/0:20,0:20:30.08:0,30,389	0/0:14,0:14:21.01:0,21,189	0/0:26,0:26:74.23:0,74,977	1/1:21,11:32:82.81:765,83,0	0/0:11,0:11:26.10:0,26,321
chr10	31783874	.	C	CAA	3683.36	PASS	AB=0.962;AC=23;AF=0.411;AN=56;BaseQRankSum=10.040;DP=628;FS=7.724;HRun=2;HaplotypeScore=147.4212;InbreedingCoeff=-0.1097;MQ=55.08;MQ0=4;MQRankSum=-10.037;QD=9.14;ReadPosRankSum=9.128;VQSLOD=-0.2588;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:12.97:0,13,441	0/1:6,6:12:99:273,0,111	0/0:25,0:15:40.22:0,40,458	0/0:23,0:17:11.60:0,12,438	0/0:33,0:33:24.92:0,25,337	0/0:26,0:26:3.47:0,3,80	0/1:20,1:20:99:129,0,247	0/1:36,0:36:2.20:411,0,2	1/1:18,0:18:1.55:4,2,0	0/0:29,0:29:1.93:0,2,634	0/1:30,0:30:99:110,0,212	0/1:20,0:20:55.06:55,0,191	0/1:23,0:23:33.91:34,0,258	0/1:14,0:14:37.68:38,0,47	0/0:24,0:24:52.57:0,53,372	0/1:21,0:21:32.70:33,0,183	0/1:19,0:19:12.86:13,0,134	0/0:15,0:15:39.04:0,39,483	0/1:16,5:20:0.12:446,0,0	1/1:17,7:24:54.56:723,55,0	1/1:7,3:10:8.10:183,8,0	0/0:18,0:18:7:0,7,372	0/1:26,0:26:72.74:73,0,162	0/1:21,0:21:13.64:14,0,258	0/1:15,0:15:4.86:49,0,5	0/1:27,0:27:35.23:35,0,363	1/1:17,15:33:66.92:1026,67,0	0/1:12,0:11:33.61:34,0,190
chr10	31783879	.	AC	A	1336.88	PASS	AB=0.854;AC=7;AF=0.125;AN=56;BaseQRankSum=1.913;DP=628;FS=2.387;HRun=1;HaplotypeScore=149.0715;InbreedingCoeff=-0.1518;MQ=52.13;MQ0=4;MQRankSum=-5.647;QD=8.63;ReadPosRankSum=-0.311;VQSLOD=0.9935;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:42.06:0,42,512	0/1:10,2:12:99:149,0,156	0/0:23,0:12:32.79:0,33,452	0/0:20,0:14:30.40:0,30,477	0/0:35,0:35:51.15:0,51,732	0/0:27,0:27:18.03:0,18,221	0/1:12,7:18:99:220,0,364	0/1:28,6:34:99:351,0,550	0/0:20,0:20:9:0,9,103	0/0:27,0:27:78.19:0,78,1086	0/0:31,0:31:78.14:0,78,901	0/0:21,0:21:48.09:0,48,548	0/0:25,0:25:44.13:0,44,519	0/0:14,0:14:24.04:0,24,265	0/0:27,0:27:9.31:0,9,203	0/0:21,0:21:31.87:0,32,356	0/0:19,0:19:27.95:0,28,340	0/0:13,0:13:33.11:0,33,482	0/1:20,4:23:99:201,0,418	0/1:20,5:25:99:263,0,416	0/1:9,1:10:99:131,0,163	0/0:14,0:14:39.11:0,39,532	0/0:25,0:25:56.02:0,56,565	0/0:22,0:22:36.07:0,36,453	0/0:19,0:19:36.05:0,36,401	0/0:28,0:28:77.22:0,77,975	0/1:29,2:31:99:152,0,739	0/0:11,0:10:7.85:0,8,262
chr10	31784077	.	G	GA	18389.91	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-7.095;DP=606;FS=0.794;HRun=6;HaplotypeScore=49.4195;InbreedingCoeff=0.9919;MQ=81.13;MQ0=0;MQRankSum=-7.613;QD=32.21;ReadPosRankSum=4.116;VQSLOD=4.9620;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,18:20:48.15:604,48,0	1/1:2,9:11:27.09:340,27,0	0/0:20,0:20:17.08:0,17,387	0/0:15,0:15:27.04:0,27,271	1/1:2,23:25:69.18:850,69,0	1/1:2,25:27:72.23:906,72,0	1/1:1,13:14:27.09:340,27,0	1/1:6,23:29:69.22:866,69,0	1/1:0,16:16:45.08:546,45,0	1/1:3,31:34:90.28:1121,90,0	1/1:3,15:18:26.41:510,26,0	1/1:4,19:23:54.11:660,54,0	1/1:1,19:20:51.10:622,51,0	1/1:1,19:20:51.16:642,51,0	1/1:0,18:18:51.16:642,51,0	1/1:1,23:24:63.13:770,63,0	1/1:2,29:31:81.26:1019,81,0	1/1:2,11:13:30.10:377,30,0	1/1:4,20:24:63.16:764,63,0	1/1:3,20:23:57.15:700,57,0	1/1:2,12:14:30.10:377,30,0	1/1:3,14:17:39.12:491,39,0	1/1:2,24:26:75.24:936,75,0	1/1:3,12:15:33.11:415,33,0	1/1:0,30:30:90.29:1132,90,0	1/1:1,26:27:78.22:955,78,0	1/1:2,27:29:75.24:941,75,0	1/1:1,22:23:69.22:866,69,0
chr10	31784588	.	T	TTTTG	10328.25	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-14.700;DP=723;FS=3.613;HRun=0;HaplotypeScore=106.4078;InbreedingCoeff=0.9814;MQ=66.79;MQ0=1;MQRankSum=-2.411;QD=40.99;ReadPosRankSum=1.336;VQSLOD=5.3669;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,129,2072	1/1:0,7:7:21.07:479,21,0	0/0:24,0:22:26.68:0,27,375	0/0:36,0:32:39.13:0,39,574	1/1:7,21:29:45.15:1069,45,0	1/1:4,17:21:48.16:1178,48,0	1/1:11,22:33:42.14:1035,42,0	1/1:15,19:35:60.18:1111,60,0	1/1:4,16:21:8.24:999,8,0	0/0:25,0:25:57.18:0,57,882	0/0:18,0:18:42.14:0,42,651	0/0:23,0:23:51.13:0,51,801	0/0:28,0:28:69.22:0,69,1086	0/0:17,0:17:42.14:0,42,699	0/0:29,0:29:60.18:0,60,922	0/0:22,0:22:11.37:0,11,656	0/0:36,0:36:79.65:0,80,1364	0/0:29,0:29:43.93:0,44,1011	1/1:12,16:28:51.17:1075,51,0	1/1:4,15:22:36.12:772,36,0	1/1:6,21:28:51.17:1206,51,0	0/0:20,0:20:45.13:0,45,692	0/0:18,0:18:48.16:0,48,753	0/0:41,0:41:90.29:0,90,1463	0/0:21,0:21:54.09:0,54,850	0/0:25,0:25:63.20:0,63,994	1/1:5,22:26:57.19:1404,57,0	0/0:5,0:5:15.05:0,15,250
chr10	31784817	.	TGTGTACTC	T	10966.81	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=16.788;DP=671;FS=36.946;HRun=0;HaplotypeScore=174.5997;InbreedingCoeff=0.9984;MQ=88.83;MQ0=0;MQRankSum=-16.079;QD=55.95;ReadPosRankSum=-1.831;VQSLOD=2.8337;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,138,5895	1/1:0,15:15:36.12:950,36,0	0/0:29,0:29:84.29:0,84,3067	0/0:30,0:30:68.62:0,69,3076	1/1:2,17:16:33.04:762,33,0	1/1:2,13:15:39.13:1078,39,0	1/1:1,16:17:39.13:1070,39,0	1/1:3,17:20:51.17:1318,51,0	1/1:3,16:18:39.13:1091,39,0	0/0:30,0:30:87.29:0,87,3420	0/0:21,0:21:60.21:0,60,2536	0/0:24,0:24:63.22:0,63,2660	0/0:25,0:25:69.24:0,69,3025	0/0:24,0:24:69.24:0,69,2920	0/0:23,0:23:66.23:0,66,2811	0/0:31,0:31:81.28:0,81,3419	0/0:35,0:35:99:0,105,4008	0/0:14,0:14:39.13:0,39,1585	1/1:2,6:8:18.06:463,18,0	1/1:6,32:34:75.22:2023,75,0	1/1:8,14:22:24.08:619,24,0	0/0:21,0:21:57.20:0,57,2322	0/0:14,0:14:39.13:0,39,1635	0/0:29,0:29:81.28:0,81,3342	0/0:33,0:33:96.33:0,96,4172	0/0:24,0:24:66.23:0,66,2881	1/1:2,21:23:57.14:1594,57,0	0/0:20,0:20:60.21:0,60,2271
chr10	31785423	.	TCAGAGA	T	8142.50	PASS	AB=0.676;AC=19;AF=0.339;AN=56;BaseQRankSum=13.638;DP=778;FS=5.113;HRun=0;HaplotypeScore=106.0162;InbreedingCoeff=0.8718;MQ=44.59;MQ0=115;MQRankSum=-11.773;QD=31.44;ReadPosRankSum=-0.029;VQSLOD=4.2884;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:40:66.23:0,66,2330	1/1:0,9:7:14.89:360,15,0	0/0:33,0:3:6.02:0,6,187	0/0:36,0:3:5.69:0,6,117	1/1:2,33:32:66.23:1584,66,0	1/1:4,19:14:27.09:648,27,0	1/1:3,24:21:51.18:1225,51,0	1/1:9,17:11:27.09:649,27,0	1/1:5,21:14:27.09:649,27,0	0/0:34,0:33:93.31:0,93,3167	0/0:21,0:21:51.18:0,51,1830	0/0:25,0:22:39.12:0,39,1253	0/0:25,0:23:33.11:0,33,1118	0/0:42,0:33:57.20:0,57,1869	0/0:42,0:38:60.21:0,60,2129	0/0:31,0:25:33.11:0,33,1159	0/0:19,0:16:33.09:0,33,1103	0/0:10,0:8:15.05:0,15,541	0/1:12,11:9:87.02:363,0,87	1/1:1,23:21:45.15:1080,45,0	1/1:22,18:22:21.07:504,21,0	0/0:30,0:29:57.20:0,57,1981	0/0:27,0:25:51.18:0,51,1777	0/0:18,0:15:14.98:0,15,333	0/0:24,0:24:60.18:0,60,2125	0/0:41,0:34:99:0,99,3503	1/1:0,26:17:45.15:1081,45,0	0/0:8,0:6:9.03:0,9,324
chr10	31785784	.	GT	G	6005.77	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=13.846;DP=668;FS=3.539;HRun=8;HaplotypeScore=63.1948;InbreedingCoeff=0.9965;MQ=75.58;MQ0=1;MQRankSum=0.947;QD=24.92;ReadPosRankSum=-1.931;VQSLOD=5.0032;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:25:72.20:0,72,847	1/1:0,13:13:39.06:376,39,0	0/0:20,0:17:14.29:0,14,293	0/0:14,0:14:33.09:0,33,386	1/1:2,30:32:81.12:780,81,0	1/1:1,24:25:63.10:608,63,0	1/1:0,17:17:51.08:492,51,0	1/1:2,33:35:99:936,99,0	1/1:0,16:16:42.07:405,42,0	0/0:36,0:36:99:0,102,1211	0/0:31,0:31:93.28:0,93,1120	0/0:24,0:24:66.20:0,66,797	0/0:30,0:30:87.27:0,87,1051	0/0:18,0:18:54.15:0,54,641	0/0:19,0:19:51.14:0,51,605	0/0:17,0:17:51.13:0,51,595	0/0:28,0:28:78.24:0,78,942	0/0:16,0:16:45.14:0,45,544	1/1:6,18:24:51.03:479,51,0	1/1:3,23:26:66.02:624,66,0	1/1:2,12:14:33.05:319,33,0	0/0:26,0:26:72.22:0,72,869	0/0:24,0:24:69.21:0,69,833	0/0:8,0:8:21.06:0,21,254	0/0:29,0:29:78.24:0,78,942	0/0:36,0:36:96.27:0,96,1139	1/1:2,37:39:99:985,102,0	0/0:25,0:25:69.21:0,69,834
chr10	31786400	.	GTC	G	878.72	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.414;DP=739;FS=0.000;HRun=0;HaplotypeScore=87.9605;InbreedingCoeff=0.9960;MQ=88.27;MQ0=1;MQRankSum=-2.711;QD=30.30;ReadPosRankSum=0.525;VQSLOD=4.9945;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:57:99:0,160,2720	0/0:22,0:22:63.22:0,63,1104	0/0:36,0:35:93.66:0,94,1501	0/0:30,0:30:66.20:0,66,1073	0/0:19,0:19:54.19:0,54,946	0/0:23,0:23:69.20:0,69,1177	0/0:26,0:26:72.23:0,72,1225	0/0:26,0:26:63.21:0,63,1078	0/0:32,0:32:90.29:0,90,1540	0/0:25,0:25:69.22:0,69,1139	0/0:25,0:25:69.24:0,69,1209	0/0:24,0:24:66.23:0,66,1148	0/0:31,0:31:84.27:0,84,1416	0/0:28,0:28:81.26:0,81,1392	1/1:2,27:28:72.24:974,72,0	0/0:17,0:17:51.16:0,51,866	0/0:33,0:33:96.33:0,96,1675	0/0:15,0:15:42.14:0,42,722	0/0:25,0:25:72.21:0,72,1163	0/0:31,0:31:81.27:0,81,1384	0/0:20,0:20:57.20:0,57,999	0/0:27,0:27:78.25:0,78,1335	0/0:32,0:32:96.31:0,96,1632	0/0:22,0:22:66.21:0,66,1128	0/0:19,0:19:57.20:0,57,999	0/0:32,0:32:93.30:0,93,1555	0/0:25,0:24:63.20:0,63,1075	0/0:8,0:8:21.07:0,21,368
chr10	31787442	.	AT	A	7917.30	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=19.341;DP=680;FS=4.905;HRun=5;HaplotypeScore=85.4593;InbreedingCoeff=0.9975;MQ=87.51;MQ0=0;MQRankSum=-6.025;QD=29.32;ReadPosRankSum=0.569;VQSLOD=5.2127;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:87.25:0,87,1154	1/1:0,6:6:18.05:202,18,0	0/0:32,0:32:80.01:0,80,999	0/0:17,0:17:48.11:0,48,602	1/1:0,29:29:87.18:970,87,0	1/1:1,21:22:60.17:681,60,0	1/1:0,13:13:36.10:408,36,0	1/1:5,31:36:90.21:986,90,0	1/1:0,26:26:75.21:851,75,0	0/0:38,0:37:99:0,111,1491	0/0:26,0:26:72.23:0,72,970	0/0:23,0:23:69.23:0,69,944	0/0:26,0:26:75.21:0,75,979	0/0:24,0:24:72.20:0,72,937	0/0:25,0:25:75.20:0,75,962	0/0:20,0:20:60.17:0,60,788	0/0:14,0:14:39.12:0,39,517	0/0:6,0:6:18.06:0,18,246	1/1:3,21:24:63.14:699,63,0	1/1:3,39:42:99:1182,111,0	1/1:2,28:30:72.20:817,72,0	0/0:25,0:25:72.24:0,72,984	0/0:19,0:19:54.05:0,54,666	0/0:19,0:19:51.17:0,51,697	0/0:28,0:28:75.21:0,75,991	0/0:27,0:27:72.22:0,72,957	1/1:4,38:42:99:1122,99,0	0/0:12,0:12:30.10:0,30,408
chr10	31788385	.	C	CTA	17704.14	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=6.571;DP=772;FS=17.335;HRun=0;HaplotypeScore=108.8182;InbreedingCoeff=0.9920;MQ=88.39;MQ0=0;MQRankSum=-4.348;QD=45.63;ReadPosRankSum=3.533;VQSLOD=4.7410;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,36:37:99:1782,99,0	0/0:12,0:12:31.33:0,31,406	0/0:30,0:30:87.23:0,87,1140	0/0:31,0:31:77.17:0,77,1082	0/0:28,0:28:78.25:0,78,1074	0/0:31,0:31:87.29:0,87,1218	0/0:28,0:28:84.25:0,84,1141	0/0:32,0:32:90.27:0,90,1202	0/0:42,0:42:99:0,120,1679	1/1:2,32:34:90.26:1568,90,0	1/1:4,20:22:51.17:910,51,0	1/1:4,38:42:99:1938,108,0	1/1:2,24:27:69.24:1227,69,0	1/1:2,25:27:63.22:1134,63,0	0/0:33,0:33:93.31:0,93,1301	1/1:0,25:25:69.24:1242,69,0	1/1:0,30:30:90.31:1620,90,0	1/1:1,15:16:45.15:810,45,0	0/0:17,0:17:45.14:0,45,615	0/0:32,0:32:90.30:0,90,1260	0/0:42,0:42:99:0,122,1720	1/1:1,19:19:54.19:971,54,0	1/1:2,18:20:50.84:918,51,0	1/1:5,22:28:66.20:1157,66,0	1/1:0,20:19:54.19:973,54,0	1/1:3,25:27:72.25:1292,72,0	0/0:26,0:26:75.22:0,75,1029	1/1:0,6:4:9.03:162,9,0
chr10	31788746	.	AC	A	14813.16	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=2.971;DP=590;FS=7.691;HRun=2;HaplotypeScore=90.7402;InbreedingCoeff=0.9697;MQ=68.53;MQ0=7;MQRankSum=-3.762;QD=27.43;ReadPosRankSum=6.828;VQSLOD=3.7784;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,37:32:78.25:1012,78,0	1/1:0,8:7:21.07:272,21,0	0/0:23,0:22:65.39:0,65,906	0/0:27,0:27:81.22:0,81,1131	1/1:1,30:31:69.22:896,69,0	1/1:1,17:18:45.15:584,45,0	1/1:0,22:22:57.19:739,57,0	1/1:2,17:18:48.16:621,48,0	1/1:1,25:26:66.21:854,66,0	1/1:3,23:19:51.17:662,51,0	1/1:0,22:14:33.11:428,33,0	1/1:1,12:7:21.07:272,21,0	1/1:0,14:12:27.09:350,27,0	1/1:0,12:10:30.10:388,30,0	1/1:1,29:30:69.22:896,69,0	1/1:1,17:12:27.09:350,27,0	1/1:0,18:16:39.13:506,39,0	1/1:1,10:8:15.05:195,15,0	1/1:4,21:24:60.17:748,60,0	1/1:1,30:25:63.20:817,63,0	1/1:1,33:34:56.53:952,57,0	1/1:1,17:13:39.13:506,39,0	1/1:1,14:12:30.10:389,30,0	1/1:0,20:17:35.78:467,36,0	1/1:1,12:9:24.08:312,24,0	1/1:0,25:20:57.19:740,57,0	1/1:2,23:23:54.18:700,54,0	1/1:0,9:4:12.04:156,12,0
chr10	31789032	.	G	GA	348.62	PASS	AB=0.732;AC=4;AF=0.083;AN=48;BaseQRankSum=-1.377;DP=727;FS=0.000;HRun=1;HaplotypeScore=41.0935;InbreedingCoeff=0.1245;MQ=35.03;MQ0=129;MQRankSum=-1.730;QD=4.01;ReadPosRankSum=0.657;VQSLOD=0.0262;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,36:45:3.01:0,3,39	./.	0/0:28,0:2:6.01:0,6,67	./.	0/0:20,10:24:21.07:0,21,269	0/0:12,8:14:15.05:0,15,195	0/0:20,16:28:12.04:0,12,156	0/0:14,0:5:18.05:0,18,222	0/0:16,6:18:24.05:0,24,295	0/0:25,5:21:18.24:0,18,723	./.	0/0:12,3:15:6.02:0,6,78	0/0:11,8:17:3.01:0,3,39	./.	0/0:24,15:32:36.12:0,36,467	0/0:13,10:15:6.01:0,6,64	0/0:16,14:21:6.02:0,6,78	0/1:15,7:18:29.93:79,0,30	0/0:19,0:8:24.08:0,24,311	0/0:27,0:27:18.02:0,18,215	0/0:32,0:24:8.98:0,9,95	0/0:27,11:25:15.05:0,15,195	0/0:14,9:15:3.01:0,3,39	1/1:8,26:23:6.02:90,6,0	0/0:12,11:9:3.01:0,3,39	0/1:18,13:21:99:280,0,407	0/0:25,0:21:42.10:0,42,532	0/0:5,2:5:3.01:0,3,39
chr10	31789388	.	T	TGCCTGCCAG	7325.30	PASS	AB=0.972;AC=33;AF=0.589;AN=56;BaseQRankSum=4.004;DP=470;FS=95.330;HRun=0;HaplotypeScore=127.2859;InbreedingCoeff=0.6547;MQ=47.36;MQ0=46;MQRankSum=-5.912;QD=32.85;ReadPosRankSum=1.505;VQSLOD=0.5618;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:9:24.01:503,24,0	0/1:10,1:9:3.06:3,0,267	0/0:34,0:23:66.20:0,66,1719	0/0:29,0:21:51.14:0,51,1367	0/0:27,0:20:6.02:0,6,143	0/0:18,3:15:3.32:0,3,375	0/0:17,0:11:3.07:0,3,349	0/1:28,0:22:18.62:19,0,939	0/0:36,0:35:9.03:0,9,805	1/1:12,3:10:29.94:613,30,0	1/1:6,1:6:6.02:249,6,0	1/1:10,5:14:33.44:809,33,0	1/1:4,5:5:15.05:449,15,0	1/1:8,3:9:11.90:286,12,0	0/0:21,0:19:6.09:0,6,482	1/1:6,3:8:18.06:399,18,0	1/1:6,3:6:14.91:325,15,0	1/1:3,3:5:15.05:462,15,0	0/0:20,0:15:14.61:0,15,707	0/0:26,0:14:24.97:0,25,569	0/1:24,0:5:11.98:12,0,64	1/1:12,2:10:11.95:303,12,0	1/1:10,6:13:26.88:804,27,0	1/1:4,4:8:18.06:607,18,0	1/1:7,4:8:18.06:578,18,0	1/1:5,7:8:24.08:739,24,0	0/0:16,0:14:6:0,6,460	1/1:6,1:6:6.02:167,6,0
chr10	31789393	.	G	GGCTGCCATGTAAC	19931.56	PASS	AB=0.833;AC=29;AF=0.518;AN=56;BaseQRankSum=13.643;DP=575;FS=190.162;HRun=0;HaplotypeScore=206.5433;InbreedingCoeff=0.8610;MQ=44.35;MQ0=58;MQRankSum=-6.713;QD=77.25;ReadPosRankSum=4.808;VQSLOD=1.4686;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:16:31.49:1345,31,0	0/0:11,1:9:15.05:0,15,557	0/0:34,0:18:54.19:0,54,2084	0/0:28,0:18:48.15:0,48,1639	0/0:25,0:16:6.02:0,6,251	0/0:23,3:17:27.05:0,27,810	0/0:21,0:12:30.10:0,30,864	0/0:26,0:21:63.19:0,63,2216	0/0:34,0:33:45.11:0,45,1654	1/1:17,3:12:25.03:1408,25,0	1/1:13,1:11:24.08:901,24,0	1/1:16,5:18:51.18:2722,51,0	1/1:8,4:10:8.09:1088,8,0	1/1:12,3:11:30.10:1699,30,0	0/0:21,0:17:24.08:0,24,950	1/1:10,3:11:10.43:1213,10,0	1/1:13,3:10:30.10:1616,30,0	1/1:7,3:6:14.08:720,14,0	0/0:19,0:14:42.14:0,42,1507	0/0:26,0:14:27.09:0,27,1042	0/0:24,0:5:6.02:0,6,165	1/1:20,2:16:18.12:969,18,0	1/1:14,6:17:42.14:2074,42,0	1/1:11,4:13:12.09:1313,12,0	1/1:16,4:10:20.89:1020,21,0	1/1:19,7:15:4.77:1636,5,0	0/0:21,0:19:40.01:0,40,1131	0/1:4,1:4:9.97:207,0,10
chr10	31790029	.	C	CTT	6731.26	PASS	AB=0.669;AC=16;AF=0.286;AN=56;BaseQRankSum=17.630;DP=1102;FS=9.965;HRun=1;HaplotypeScore=157.5902;InbreedingCoeff=-0.2110;MQ=45.40;MQ0=41;MQRankSum=-4.485;QD=10.68;ReadPosRankSum=1.052;VQSLOD=0.9372;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:41,22:42:99:219,0,1302	0/0:17,0:17:51.16:0,51,807	0/0:21,0:17:51.15:0,51,770	0/0:14,0:13:28.30:0,28,388	0/0:29,0:27:81.25:0,81,1271	0/0:39,0:37:99:0,102,1651	0/0:62,0:61:99:0,163,2582	0/0:27,0:25:75.24:0,75,1195	0/0:57,0:50:99:0,132,2113	0/1:12,18:24:99:429,0,435	1/1:2,27:25:36.09:689,36,0	0/1:39,25:49:99:791,0,1098	0/1:32,26:45:99:635,0,1080	0/1:34,19:46:99:500,0,1159	0/0:62,0:56:99:0,166,2685	0/1:26,14:29:99:234,0,806	0/1:29,20:39:99:517,0,888	0/1:26,8:30:99:223,0,994	0/0:17,0:16:42.14:0,42,663	0/0:26,0:25:75.24:0,75,1196	0/0:70,0:70:99:0,193,3071	0/1:8,33:28:9.61:649,0,10	0/1:2,18:18:23.61:474,0,24	0/1:42,19:47:99:106,0,1271	0/1:7,19:22:99:282,0,302	0/1:20,25:35:99:581,0,793	0/0:31,0:29:87.28:0,87,1392	0/1:2,8:8:24.62:402,0,25
chr10	31790134	.	A	AAG	6458.86	PASS	AB=0.714;AC=15;AF=0.288;AN=52;BaseQRankSum=-13.381;DP=1017;FS=96.629;HRun=0;HaplotypeScore=154.4824;InbreedingCoeff=-0.4106;MQ=38.55;MQ0=108;MQRankSum=2.794;QD=10.40;ReadPosRankSum=0.800;VQSLOD=0.9637;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:45,29:57:99:756,0,366	0/0:11,0:9:21.07:0,21,265	./.	./.	0/0:27,0:20:14.95:0,15,189	0/0:36,0:27:57.18:0,57,718	0/0:53,0:47:69.13:0,69,801	0/0:19,0:15:29.12:0,29,368	0/0:49,0:44:96.19:0,96,1155	0/1:22,26:23:15.52:827,0,16	0/1:10,7:8:89.43:225,0,89	0/1:32,19:35:99:578,0,309	0/1:18,22:30:99:767,0,244	0/1:36,15:41:99:230,0,574	0/0:57,0:53:99:0,105,1306	0/1:20,15:27:99:344,0,324	0/1:54,16:55:99:490,0,780	0/1:24,8:25:99:204,0,310	0/0:18,0:15:27.05:0,27,323	0/0:19,0:18:36.11:0,36,450	0/0:28,0:26:41.87:0,42,456	0/1:15,18:19:42.57:397,0,43	0/1:14,10:17:42.58:380,0,43	0/1:39,13:41:99:276,0,537	0/1:13,20:22:99:503,0,106	0/1:25,14:20:99:364,0,287	0/0:14,0:8:6.02:0,6,74	0/1:10,6:12:99:116,0,200
chr10	31790154	.	G	GTGCAGA	6753.71	PASS	AB=0.686;AC=16;AF=0.286;AN=56;BaseQRankSum=-12.439;DP=959;FS=1.587;HRun=0;HaplotypeScore=205.8844;InbreedingCoeff=0.5518;MQ=39.81;MQ0=74;MQRankSum=-10.196;QD=25.58;ReadPosRankSum=-3.663;VQSLOD=3.7896;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:71,0:60:89.98:0,90,1801	0/1:6,6:10:47.96:488,0,48	0/0:33,0:2:2.98:0,3,22	0/0:26,0:3:8.98:0,9,135	1/1:9,11:18:2.75:100,3,0	0/1:19,12:29:99:968,0,349	0/1:33,9:44:99:471,0,427	1/1:8,7:11:15.02:345,15,0	0/1:26,26:51:99:2257,0,197	0/0:45,0:27:77.91:0,78,1659	0/0:12,0:10:30.09:0,30,619	0/0:47,0:35:84.75:0,85,1764	0/0:45,0:38:93.27:0,93,2024	0/0:52,0:42:75.10:0,75,1482	0/0:55,0:49:99:0,108,2231	0/0:33,0:26:66.16:0,66,1407	0/0:59,0:50:99:0,100,2108	0/0:27,0:23:39.13:0,39,859	1/1:8,8:15:30.10:823,30,0	1/1:3,12:14:18.06:600,18,0	1/1:12,10:20:5.64:193,6,0	0/0:30,0:21:42.14:0,42,925	0/0:24,0:18:41.95:0,42,788	0/0:54,0:43:87.19:0,87,1774	0/0:30,0:23:51.18:0,51,1124	0/0:35,0:22:54.13:0,54,1104	1/1:4,8:8:15.05:509,15,0	0/0:15,0:11:27.09:0,27,595
chr10	31790382	.	C	CTT	1679.88	PASS	AB=0.886;AC=14;AF=0.250;AN=56;BaseQRankSum=10.459;DP=635;FS=1.965;HRun=1;HaplotypeScore=89.3970;InbreedingCoeff=0.5992;MQ=65.43;MQ0=7;MQRankSum=-8.757;QD=11.27;ReadPosRankSum=-1.878;VQSLOD=-0.2183;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,114,1717	0/1:8,2:10:73.07:73,0,294	0/0:34,0:32:93.29:0,93,1400	0/0:28,0:28:78.26:0,78,1164	0/0:21,1:22:11.33:0,11,826	0/0:23,0:22:63.20:0,63,940	0/0:22,2:22:63.19:0,63,940	1/1:5,10:4:12.01:177,12,0	0/0:27,0:27:72.24:0,72,1101	0/0:24,0:19:57.17:0,57,850	0/0:18,1:12:33.10:0,33,484	0/0:24,0:24:69.23:0,69,1056	0/0:22,1:22:11.09:0,11,866	0/0:28,1:28:84.29:0,84,1286	0/0:38,1:39:64.29:0,64,1692	0/0:19,0:19:54.17:0,54,806	0/0:27,0:27:72.22:0,72,1077	0/0:26,0:26:75.22:0,75,1122	1/1:3,11:7:15.05:289,15,0	1/1:1,9:7:21.03:367,21,0	1/1:2,10:12:21.07:387,21,0	0/1:31,4:25:53.34:53,0,848	0/1:16,2:16:13.35:13,0,510	0/0:24,0:24:69.23:0,69,1056	0/1:19,2:18:18.92:19,0,680	0/0:21,3:18:51.16:0,51,760	1/1:1,12:11:27.06:484,27,0	0/0:9,2:6:18.06:0,18,275
chr10	31791040	.	C	CTT	5621.30	PASS	AB=0.929;AC=45;AF=0.804;AN=56;BaseQRankSum=-5.133;DP=513;FS=3.025;HRun=13;HaplotypeScore=113.2857;InbreedingCoeff=0.3721;MQ=60.42;MQ0=13;MQRankSum=-4.199;QD=11.78;ReadPosRankSum=-3.122;VQSLOD=3.2143;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:13,21:34:45.76:494,46,0	0/0:3,0:3:0.68:0,1,5	0/0:8,0:3:2.93:0,3,25	0/0:22,0:20:32.21:0,32,217	0/1:17,0:16:10.14:10,0,55	0/1:13,0:13:28.04:62,0,28	0/1:16,0:14:2.88:3,0,37	1/1:31,0:30:14.52:367,15,0	0/1:9,0:9:9.52:13,0,10	1/1:9,12:22:38.47:385,38,0	1/1:9,8:16:17.74:195,18,0	1/1:4,5:10:17.38:148,17,0	1/1:10,2:12:25.73:212,26,0	1/1:9,3:12:14.38:105,14,0	1/1:7,9:16:22.22:246,22,0	1/1:5,2:8:14.42:116,14,0	1/1:28,15:43:13.69:869,14,0	1/1:9,3:10:15.69:189,16,0	1/1:23,0:24:25.24:239,25,0	1/1:17,2:18:35.82:324,36,0	1/1:8,0:8:3.89:30,4,0	1/1:17,4:20:23.48:154,23,0	1/1:10,12:23:32.89:349,33,0	1/1:5,10:14:9.03:122,9,0	0/1:8,9:17:0.09:181,0,0	1/1:20,2:21:42.02:329,42,0	1/1:18,1:18:15.50:323,15,0	1/1:14,14:30:11.64:156,12,0
chr10	31791053	.	T	TTTC	3446.42	PASS	AB=0.939;AC=31;AF=0.554;AN=56;BaseQRankSum=-1.790;DP=498;FS=6.069;HRun=0;HaplotypeScore=97.5764;InbreedingCoeff=-0.1258;MQ=49.42;MQ0=24;MQRankSum=4.203;QD=7.92;ReadPosRankSum=4.388;VQSLOD=2.2425;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:31,0:29:32.22:32,0,88	1/1:0,0:3:8.64:49,9,0	0/0:6,0:1:3:0,3,27	0/0:19,0:15:34.82:0,35,324	0/1:2,0:17:11.08:131,0,11	1/1:5,1:12:27.06:235,27,0	0/1:8,0:21:16.32:123,0,16	1/1:7,19:32:74.24:821,74,0	1/1:3,0:12:5.31:78,5,0	0/1:18,0:18:71.25:73,0,71	0/1:12,0:10:11.34:19,0,11	0/0:9,0:9:10.74:0,11,80	0/1:15,0:14:20.71:21,0,99	0/0:13,0:13:11.39:0,11,145	0/1:14,0:13:4:4,0,78	0/1:8,0:7:19.55:20,0,34	0/1:53,0:51:99:144,0,325	0/1:20,0:16:13.06:13,0,80	1/1:1,10:13:38.88:504,39,0	1/1:5,12:18:24.17:404,24,0	1/1:0,4:6:5.93:82,6,0	0/1:16,0:15:25.52:26,0,95	0/1:23,0:22:33.04:33,0,104	0/1:15,0:14:10.74:11,0,23	0/0:15,0:14:4.45:0,4,144	0/1:26,0:22:37.34:37,0,181	1/1:7,7:15:33.71:579,34,0	0/1:26,0:24:10.15:10,0,104
chr10	31791501	.	C	CAAA	8412.71	PASS	AB=0.825;AC=50;AF=0.893;AN=56;BaseQRankSum=-3.498;DP=463;FS=7.260;HRun=12;HaplotypeScore=101.2401;InbreedingCoeff=0.6745;MQ=75.81;MQ0=0;MQRankSum=-3.701;QD=19.84;ReadPosRankSum=0.420;VQSLOD=3.4740;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,21:30:51.13:826,51,0	1/1:0,0:5:14.94:114,15,0	0/1:31,0:25:1.86:2,0,115	0/0:18,0:15:15.60:0,16,146	1/1:2,0:18:40.05:294,40,0	1/1:4,2:20:40.93:355,41,0	0/1:6,0:13:48.10:72,0,48	1/1:11,0:27:55.59:454,56,0	1/1:3,1:10:14.98:175,15,0	1/1:6,9:22:42.94:619,43,0	1/1:1,9:11:33.11:552,33,0	1/1:5,10:15:19.62:317,20,0	1/1:4,6:10:18.06:277,18,0	1/1:7,3:12:12.02:173,12,0	0/0:1,0:20:44.10:0,44,266	1/1:5,6:16:18:234,18,0	1/1:12,9:24:27.09:466,27,0	1/1:7,11:19:23.49:347,23,0	1/1:3,1:11:22.19:196,22,0	1/1:3,0:11:20.42:149,20,0	1/1:2,0:10:16.17:114,16,0	1/1:6,5:12:18.06:300,18,0	1/1:3,8:16:33.05:493,33,0	1/1:4,4:11:17.54:269,18,0	1/1:3,7:12:34.34:526,34,0	1/1:5,9:20:37.29:528,37,0	1/1:5,1:24:41.84:320,42,0	1/1:3,3:7:15.03:243,15,0
chr10	31792232	.	A	AAGAT	4800.28	PASS	AC=28;AF=0.609;AN=46;BaseQRankSum=2.629;DP=355;FS=0.000;HRun=0;HaplotypeScore=44.1937;InbreedingCoeff=0.7717;MQ=21.27;MQ0=80;MQRankSum=0.020;QD=37.80;ReadPosRankSum=4.043;VQSLOD=4.2078;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,1:1:3.01:79,3,0	0/0:8,0:5:8.99:0,9,130	./.	./.	0/0:23,0:12:18.06:0,18,331	0/0:16,0:5:11.95:0,12,150	0/0:14,0:2:3.01:0,3,55	./.	0/0:16,0:10:21.07:0,21,385	1/1:5,9:10:27.09:712,27,0	1/1:8,6:8:12.04:315,12,0	1/1:1,2:3:6.02:156,6,0	1/1:2,3:5:6.02:158,6,0	1/1:1,1:3:6.02:145,6,0	0/0:24,1:16:39.13:0,39,717	1/1:2,3:5:9.03:237,9,0	1/1:2,3:3:9.03:237,9,0	./.	0/0:13,0:4:9.03:0,9,165	0/0:31,0:18:27.01:0,27,426	./.	1/1:6,13:15:33.11:868,33,0	1/1:7,9:11:18.06:473,18,0	1/1:4,1:4:3.01:79,3,0	1/1:3,9:9:18.06:474,18,0	1/1:6,13:14:30.10:791,30,0	0/0:34,0:18:51.06:0,51,803	1/1:5,1:1:3.01:79,3,0
chr10	31792336	.	GA	G	1467.14	PASS	AC=26;AF=0.929;AN=28;BaseQRankSum=2.357;DP=239;FS=11.181;HRun=7;HaplotypeScore=30.7735;InbreedingCoeff=0.4176;MQ=22.26;MQ0=54;MQRankSum=-2.404;QD=9.53;ReadPosRankSum=0.677;VQSLOD=0.0653;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	1/1:2,4:6:6.01:61,6,0	./.	./.	1/1:3,19:19:24.05:243,24,0	./.	1/1:1,2:2:3.01:31,3,0	./.	./.	1/1:1,5:4:12.03:122,12,0	1/1:2,14:15:12.01:122,12,0	1/1:0,1:1:3.01:31,3,0	./.	./.	0/0:19,0:10:6.02:0,6,75	./.	./.	./.	./.	1/1:1,22:21:21.05:213,21,0	./.	1/1:3,13:15:21.04:214,21,0	1/1:2,13:15:9.01:92,9,0	./.	1/1:0,17:17:12.02:122,12,0	1/1:1,4:4:12.03:122,12,0	1/1:2,9:5:6.01:61,6,0	1/1:4,9:9:12.02:122,12,0
chr10	31792806	.	T	TAGGCTTCATCCC	4878.77	PASS	AC=26;AF=0.500;AN=52;BaseQRankSum=5.160;DP=353;FS=2.346;HRun=0;HaplotypeScore=85.9514;InbreedingCoeff=0.7839;MQ=43.77;MQ0=66;MQRankSum=-7.847;QD=81.31;ReadPosRankSum=-1.419;VQSLOD=4.3158;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,4:7:9.03:550,9,0	0/0:5,0:5:12.04:0,12,448	0/0:29,0:5:9.03:0,9,306	0/0:30,0:4:9.03:0,9,211	0/0:14,0:14:29.20:0,29,902	0/0:19,0:19:30.10:0,30,1083	0/0:26,0:26:69.22:0,69,2408	0/0:43,0:17:42.12:0,42,1340	0/0:15,0:15:36.11:0,36,1180	1/1:2,3:5:12.04:734,12,0	1/1:1,1:1:3.01:183,3,0	1/1:3,1:3:3.01:183,3,0	1/1:2,1:2:3.01:183,3,0	1/1:2,3:5:15.05:737,15,0	0/0:11,0:11:21.07:0,21,783	1/1:4,1:5:5.99:132,6,0	1/1:2,1:2:5.89:198,6,0	./.	0/0:20,0:11:33.11:0,33,1109	0/0:14,0:13:33.11:0,33,1218	0/0:35,0:35:99:0,102,3589	./.	1/1:1,2:2:6.02:277,6,0	1/1:1,0:1:2.88:15,3,0	1/1:8,4:10:21:776,21,0	1/1:3,5:8:18.06:887,18,0	0/0:25,0:23:63.20:0,63,2052	1/1:1,0:1:2.99:23,3,0
chr10	31792899	.	T	TG	2207.70	PASS	AC=28;AF=0.519;AN=54;BaseQRankSum=10.435;DP=254;FS=6.792;HRun=0;HaplotypeScore=56.8698;InbreedingCoeff=0.8664;MQ=72.11;MQ0=0;MQRankSum=-7.728;QD=26.92;ReadPosRankSum=-2.235;VQSLOD=3.2278;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,8:8:5.82:125,6,0	0/0:9,0:9:27.09:0,27,365	0/0:8,0:8:9.50:0,9,234	0/0:6,0:6:12.01:0,12,144	0/0:7,0:7:18.04:0,18,233	0/0:6,0:6:12.04:0,12,168	0/0:39,0:39:99:0,117,1632	0/0:10,0:10:27.07:0,27,344	0/0:11,0:11:33.11:0,33,457	1/1:0,3:2:6.02:83,6,0	1/1:1,3:5:8.61:120,9,0	1/1:0,2:2:6.02:96,6,0	1/1:0,4:4:9.03:144,9,0	1/1:0,7:7:9.03:143,9,0	0/0:6,0:6:18.06:0,18,252	./.	1/1:1,9:10:23.25:297,23,0	1/1:0,3:3:9.03:144,9,0	0/0:12,0:12:36.12:0,36,501	0/0:3,0:3:9:0,9,104	0/0:46,0:46:99:0,135,1878	1/1:0,4:4:12.04:190,12,0	1/1:0,3:4:9.03:143,9,0	1/1:0,7:7:12.04:168,12,0	1/1:0,4:4:9.03:143,9,0	1/1:0,9:7:18.06:287,18,0	0/0:9,0:9:21.07:0,21,293	1/1:0,9:9:21.07:335,21,0
chr10	31792913	.	G	GGCCT	2897.51	PASS	AB=0.800;AC=27;AF=0.500;AN=54;BaseQRankSum=9.850;DP=252;FS=5.429;HRun=0;HaplotypeScore=84.3092;InbreedingCoeff=0.7887;MQ=75.59;MQ0=0;MQRankSum=-9.325;QD=38.13;ReadPosRankSum=-1.848;VQSLOD=3.1452;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,7:10:12.03:326,12,0	0/0:7,0:7:21.07:0,21,404	0/0:7,0:7:15.04:0,15,237	0/0:8,0:8:10.48:0,10,175	0/0:5,0:5:9.03:0,9,155	0/0:4,0:4:9.03:0,9,174	0/0:42,0:42:99:0,126,2297	0/0:8,0:8:24.06:0,24,381	0/0:9,0:9:18.06:0,18,325	1/1:1,2:2:3.01:82,3,0	0/1:3,1:4:0:0,0,0	1/1:1,0:1:3.01:81,3,0	1/1:0,3:3:6.02:164,6,0	1/1:3,5:8:12.04:296,12,0	0/0:7,0:7:11.22:0,11,284	./.	1/1:3,5:8:15.05:408,15,0	1/1:3,0:3:3.01:82,3,0	0/0:14,0:14:39.12:0,39,704	0/0:3,0:3:6.02:0,6,116	0/0:54,0:54:99:0,159,2817	1/1:3,2:5:8.99:183,9,0	1/1:0,4:4:9.03:244,9,0	1/1:3,4:7:12.04:308,12,0	1/1:1,3:4:9.03:245,9,0	1/1:2,8:8:18.06:491,18,0	0/0:8,0:8:21.07:0,21,406	1/1:1,2:3:9:185,9,0
chr10	31792926	.	GGGC	G	866.87	PASS	AB=0.619;AC=23;AF=0.426;AN=54;BaseQRankSum=9.408;DP=229;FS=16.094;HRun=0;HaplotypeScore=70.1362;InbreedingCoeff=0.4695;MQ=81.47;MQ0=0;MQRankSum=-9.506;QD=13.34;ReadPosRankSum=0.306;VQSLOD=1.5593;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,11:9:17.70:177,18,0	0/0:5,0:5:9.03:0,9,186	0/0:8,0:8:24.08:0,24,487	0/0:7,0:7:21.07:0,21,485	0/0:1,0:1:3.01:0,3,48	0/0:1,0:1:3.01:0,3,71	0/0:43,0:43:99:0,126,2868	0/0:14,0:14:30.10:0,30,629	0/0:6,0:6:18.06:0,18,424	1/1:1,1:2:3.01:31,3,0	1/1:1,1:2:2.98:22,3,0	1/1:0,3:3:9.02:89,9,0	1/1:0,3:3:6.01:60,6,0	1/1:1,6:7:12.02:116,12,0	0/0:6,0:6:18.06:0,18,403	./.	0/1:2,7:9:8.83:152,0,9	1/1:0,2:2:6.02:69,6,0	0/0:11,0:11:33.11:0,33,722	0/0:3,0:3:6.02:0,6,106	0/0:52,0:52:99:0,150,3235	1/1:0,3:3:9.02:89,9,0	0/1:2,2:4:6.79:50,0,7	1/1:1,6:7:5.93:60,6,0	0/1:1,2:3:8.01:50,0,8	0/1:2,4:5:16.44:59,0,16	0/0:7,0:7:21.07:0,21,496	0/1:1,1:2:7.82:25,0,8
chr10	31792931	.	AAG	A	795.70	PASS	AB=0.556;AC=27;AF=0.500;AN=54;BaseQRankSum=9.484;DP=221;FS=20.552;HRun=0;HaplotypeScore=64.4306;InbreedingCoeff=0.6482;MQ=85.81;MQ0=0;MQRankSum=-9.513;QD=12.63;ReadPosRankSum=1.080;VQSLOD=1.4799;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,11:9:17.65:153,18,0	0/0:3,0:3:9.03:0,9,171	0/0:8,0:8:24.08:0,24,418	0/0:9,0:9:27.09:0,27,472	0/0:1,0:1:3.01:0,3,50	0/0:1,0:1:3.01:0,3,61	0/0:41,0:41:99:0,123,2431	0/0:13,0:13:30.10:0,30,564	0/0:6,0:6:18.06:0,18,366	1/1:0,1:1:3:27,3,0	1/1:1,1:2:3.01:33,3,0	1/1:0,3:3:8.99:77,9,0	1/1:0,3:3:6:52,6,0	1/1:1,6:7:11.98:100,12,0	0/0:6,0:6:18.06:0,18,351	./.	1/1:2,7:9:1.16:145,1,0	1/1:0,2:2:6.01:61,6,0	0/0:12,0:12:33.11:0,33,655	0/0:2,0:2:3.01:0,3,61	0/0:49,0:49:99:0,141,2717	1/1:0,3:3:8.99:75,9,0	1/1:2,2:4:5.99:50,6,0	1/1:1,6:7:8.73:87,9,0	1/1:1,2:3:5.98:51,6,0	0/1:1,4:4:10.80:46,0,11	0/0:7,0:7:21.07:0,21,426	1/1:1,1:2:3:26,3,0
chr10	31792963	.	CCGGGGCGCTGT	C	5256.32	PASS	AC=26;AF=0.500;AN=52;BaseQRankSum=10.457;DP=275;FS=60.711;HRun=0;HaplotypeScore=122.5349;InbreedingCoeff=0.8089;MQ=70.75;MQ0=0;MQRankSum=-10.983;QD=61.12;ReadPosRankSum=2.938;VQSLOD=2.0912;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,8:11:18.06:630,18,0	0/0:2,0:2:6.02:0,6,345	0/0:4,0:4:12.04:0,12,442	0/0:8,0:8:24.08:0,24,737	0/0:14,0:14:39.12:0,39,1695	0/0:1,0:1:3.01:0,3,97	0/0:34,0:34:99:0,102,4831	0/0:13,0:13:36.12:0,36,1706	0/0:4,0:4:12.04:0,12,563	1/1:1,6:6:15.05:479,15,0	./.	1/1:1,3:4:6.02:214,6,0	1/1:2,3:5:6.02:214,6,0	1/1:1,8:9:15.05:535,15,0	0/0:5,0:5:15.05:0,15,696	./.	1/1:1,10:11:33.11:1046,33,0	1/1:1,5:6:15.05:535,15,0	0/0:21,0:21:54.18:0,54,2229	0/0:5,0:5:12.04:0,12,582	0/0:67,0:67:99:0,199,9540	1/1:3,5:8:9.03:306,9,0	1/1:1,1:2:3.01:56,3,0	1/1:4,2:6:3.01:106,3,0	1/1:2,4:5:9.03:321,9,0	1/1:2,7:8:24.08:707,24,0	0/0:8,0:8:24.08:0,24,1192	1/1:0,1:1:3.01:107,3,0
chr10	31793502	.	TCA	T	568.16	PASS	AC=2;AF=0.038;AN=52;BaseQRankSum=5.034;DP=638;FS=3.652;HRun=0;HaplotypeScore=63.2558;InbreedingCoeff=0.9679;MQ=48.91;MQ0=58;MQRankSum=2.772;QD=28.41;ReadPosRankSum=0.102;VQSLOD=4.8002;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,111,2078	0/0:8,0:7:21.05:0,21,361	./.	./.	0/0:23,0:18:39.13:0,39,722	0/0:20,0:20:39.13:0,39,729	0/0:22,0:22:21.07:0,21,393	0/0:31,0:20:57.18:0,57,1030	0/0:20,0:19:36.09:0,36,672	0/0:30,0:28:84.28:0,84,1542	0/0:12,0:10:21.07:0,21,393	0/0:23,0:22:42.14:0,42,782	0/0:17,0:17:42.14:0,42,783	0/0:24,0:22:54.19:0,54,1011	1/1:1,19:19:45.15:662,45,0	0/0:18,0:18:45.15:0,45,842	0/0:43,0:42:99:0,105,1930	0/0:20,0:20:51.17:0,51,954	0/0:23,0:17:51.17:0,51,955	0/0:17,0:15:33.11:0,33,615	0/0:33,0:31:54.19:0,54,999	0/0:22,0:14:30.10:0,30,561	0/0:15,0:12:24.06:0,24,416	0/0:29,0:29:69.22:0,69,1251	0/0:12,0:11:24.08:0,24,449	0/0:25,0:23:63.22:0,63,1179	0/0:26,0:23:60.21:0,60,1122	0/0:11,0:9:15.05:0,15,280
chr10	31793744	.	T	TACGCACAGG	21688.13	PASS	AB=0.667;AC=49;AF=0.942;AN=52;BaseQRankSum=-3.513;DP=489;FS=0.000;HRun=0;HaplotypeScore=102.5971;InbreedingCoeff=0.5965;MQ=33.22;MQ0=23;MQRankSum=-5.516;QD=48.85;ReadPosRankSum=-1.257;VQSLOD=4.4462;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:17,11:25:15.03:567,15,0	1/1:0,2:2:6.02:281,6,0	./.	./.	0/1:11,11:16:0.02:0,0,0	1/1:8,9:17:29.99:1060,30,0	1/1:11,5:13:15.05:702,15,0	1/1:13,1:11:9.02:223,9,0	1/1:7,9:16:30.10:1367,30,0	1/1:10,12:21:42.14:1726,42,0	1/1:4,7:10:12.04:507,12,0	1/1:8,17:22:45.11:1973,45,0	1/1:6,9:17:27.09:1181,27,0	1/1:8,13:21:33.11:1505,33,0	0/0:26,0:25:42.14:0,42,1208	1/1:10,6:17:23.97:881,24,0	1/1:8,10:9:12.04:551,12,0	1/1:5,5:7:9.03:422,9,0	1/1:9,6:11:18.05:560,18,0	1/1:10,6:13:13.29:564,13,0	1/1:10,5:9:5.99:265,6,0	1/1:9,12:13:17.99:714,18,0	1/1:9,7:11:9.03:416,9,0	1/1:7,6:9:6.02:279,6,0	1/1:6,5:12:15.05:703,15,0	1/1:7,14:19:42.14:1817,42,0	1/1:8,20:27:57.19:2565,57,0	1/1:5,7:11:21.03:859,21,0
chr10	31794014	.	C	CACTA	4771.52	PASS	AB=0.727;AC=19;AF=0.339;AN=56;BaseQRankSum=-0.118;DP=442;FS=2.285;HRun=0;HaplotypeScore=101.8596;InbreedingCoeff=0.8715;MQ=48.07;MQ0=29;MQRankSum=-8.927;QD=35.34;ReadPosRankSum=-3.043;VQSLOD=4.4580;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:31:57.04:0,57,893	1/1:0,6:5:11.81:313,12,0	0/0:20,0:5:9.03:0,9,146	0/0:27,0:7:18.06:0,18,319	1/1:2,7:7:11.97:254,12,0	0/1:5,3:8:36.48:286,0,36	1/1:7,7:13:29.93:605,30,0	1/1:12,12:16:24.08:592,24,0	1/1:3,8:11:30.01:664,30,0	0/0:15,0:15:45.12:0,45,759	0/0:5,0:5:9.03:0,9,164	0/0:23,0:23:48.06:0,48,801	0/0:18,0:18:45.03:0,45,738	0/0:27,0:25:54.10:0,54,931	0/0:20,0:20:45.14:0,45,788	0/0:17,0:16:13.80:0,14,456	0/0:14,0:13:33.11:0,33,600	0/0:9,0:9:23.85:0,24,424	1/1:7,9:8:20.70:549,21,0	1/1:2,4:4:8.96:175,9,0	1/1:10,23:32:32.90:907,33,0	0/0:9,0:8:17.94:0,18,255	0/0:8,0:6:12.01:0,12,186	0/0:23,0:22:51.08:0,51,833	0/0:14,0:14:27.08:0,27,455	0/0:10,0:10:30.10:0,30,546	1/1:2,6:7:20.94:428,21,0	0/0:15,0:15:39.60:0,40,707
chr10	31794055	.	GCCACCCT	G	3117.89	PASS	AB=0.947;AC=24;AF=0.429;AN=56;BaseQRankSum=0.963;DP=373;FS=7.506;HRun=0;HaplotypeScore=125.5944;InbreedingCoeff=0.3789;MQ=61.86;MQ0=2;MQRankSum=-10.470;QD=18.90;ReadPosRankSum=-4.292;VQSLOD=1.2160;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:23:29.53:30,0,1242	1/1:0,2:2:6.02:158,6,0	0/0:29,0:22:37.22:0,37,1759	0/0:25,0:17:45.15:0,45,1524	1/1:2,2:3:3.01:79,3,0	1/1:0,7:7:21.07:499,21,0	1/1:4,6:9:27.09:594,27,0	1/1:11,2:13:33.01:423,33,0	1/1:1,5:6:18.06:380,18,0	0/0:19,0:19:21.84:0,22,1012	0/0:5,0:5:9.03:0,9,253	0/0:24,0:24:42.98:0,43,1381	0/0:16,0:16:39.09:0,39,995	0/0:17,0:17:42.07:0,42,980	0/0:20,0:20:57.18:0,57,2141	0/0:12,0:11:30.10:0,30,749	0/0:12,0:11:33.09:0,33,841	0/1:8,0:8:3.25:3,0,235	0/1:6,3:9:7.80:361,0,8	1/1:2,3:3:6.02:158,6,0	0/1:15,4:16:27.47:205,0,27	0/1:9,0:9:27.64:28,0,307	0/1:9,0:9:1.96:2,0,308	0/0:16,0:14:1.50:0,1,708	0/1:18,0:18:48.22:48,0,707	0/1:16,0:16:18.19:18,0,796	1/1:3,3:6:18.04:322,18,0	0/0:13,0:13:36.01:0,36,814
chr10	31794062	.	T	TG	9398.45	PASS	AB=0.538;AC=49;AF=0.875;AN=56;BaseQRankSum=-0.040;DP=357;FS=1.940;HRun=0;HaplotypeScore=66.9063;InbreedingCoeff=0.7551;MQ=58.88;MQ0=3;MQRankSum=-5.734;QD=32.75;ReadPosRankSum=3.478;VQSLOD=4.5819;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,24:22:57.19:910,57,0	1/1:2,0:2:5.81:32,6,0	0/0:26,0:19:54.08:0,54,697	0/0:23,0:15:39.13:0,39,545	1/1:3,2:4:2.88:15,3,0	1/1:9,0:9:20.27:141,20,0	1/1:7,4:9:26.38:238,26,0	1/1:5,12:17:16.57:501,17,0	1/1:5,1:6:17.68:189,18,0	1/1:0,16:16:48.15:743,48,0	1/1:2,4:6:9.03:126,9,0	1/1:0,22:22:54.18:862,54,0	1/1:2,15:17:36.12:574,36,0	1/1:0,11:11:33.11:527,33,0	0/0:21,0:21:57.17:0,57,795	1/1:0,11:10:27.09:431,27,0	1/1:0,11:10:30.10:479,30,0	1/1:0,6:6:12.04:192,12,0	1/1:4,4:8:20.88:247,21,0	1/1:5,0:3:5.81:32,6,0	1/1:5,10:12:14.77:174,15,0	1/1:0,9:9:21.07:334,21,0	0/1:1,6:7:1.40:176,0,1	1/1:1,16:15:29.99:478,30,0	1/1:2,18:20:45.15:717,45,0	1/1:1,14:15:45:653,45,0	1/1:3,3:6:17.84:197,18,0	1/1:0,11:11:27.09:431,27,0
chr10	31794105	.	TTA	T	1666.45	PASS	AC=40;AF=0.800;AN=50;BaseQRankSum=0.954;DP=272;FS=8.904;HRun=0;HaplotypeScore=62.6607;InbreedingCoeff=0.5908;MQ=36.76;MQ0=8;MQRankSum=3.715;QD=8.29;ReadPosRankSum=-0.499;VQSLOD=1.8294;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:14,4:15:27.46:203,27,0	./.	0/0:18,0:9:17.95:0,18,145	0/0:19,0:8:13.99:0,14,127	./.	1/1:12,0:11:3.80:21,4,0	1/1:13,1:10:14.10:86,14,0	1/1:14,0:14:35.62:290,36,0	1/1:6,0:5:5.91:41,6,0	1/1:4,2:5:11.93:95,12,0	1/1:4,0:4:2.99:24,3,0	1/1:6,4:9:11.97:99,12,0	1/1:10,3:11:6.49:106,6,0	1/1:6,2:8:5.52:88,6,0	0/0:11,0:10:12.01:0,12,139	1/1:3,2:5:8.99:74,9,0	1/1:12,1:11:12.96:105,13,0	1/1:3,4:6:10.30:78,10,0	1/1:11,0:10:20.21:148,20,0	0/0:7,0:7:0:0,0,0	1/1:9,1:6:2.84:14,3,0	1/1:8,2:10:3.02:38,3,0	./.	1/1:6,5:8:8.87:73,9,0	1/1:9,2:11:3:25,3,0	1/1:9,3:12:17.12:132,17,0	0/0:6,0:5:3.90:0,4,9	1/1:6,0:5:8.97:70,9,0
chr10	31794172	.	GT	G	2772.03	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=2.060;DP=387;FS=0.000;HRun=10;HaplotypeScore=61.9071;InbreedingCoeff=0.8311;MQ=49.32;MQ0=13;MQRankSum=-2.791;QD=17.88;ReadPosRankSum=2.545;VQSLOD=4.2774;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,1:32:48.98:0,49,751	1/1:0,2:1:3:26,3,0	0/1:16,0:9:6.49:6,0,88	0/0:14,0:11:25.28:0,25,169	1/1:0,12:12:29.87:249,30,0	1/1:2,13:14:35.99:312,36,0	1/1:6,7:9:26.99:234,27,0	1/1:1,24:25:71.98:625,72,0	1/1:1,10:10:20.98:181,21,0	0/0:13,1:14:6.97:0,7,282	0/0:12,0:12:35.54:0,36,353	0/0:12,0:9:18.05:0,18,199	0/0:8,0:8:19.29:0,19,202	0/0:10,0:9:24.04:0,24,254	0/0:4,0:11:25.69:0,26,133	0/0:6,0:4:9.02:0,9,100	0/0:17,0:16:42.11:0,42,464	0/0:17,0:14:32.76:0,33,343	1/1:3,12:13:5.94:279,6,0	1/1:1,11:12:35.99:312,36,0	1/1:1,14:15:38.97:338,39,0	0/0:5,0:5:12.03:0,12,133	0/0:13,0:11:33.09:0,33,361	0/0:18,1:17:0.69:0,1,235	0/0:14,0:13:39.11:0,39,431	0/0:16,0:15:22.79:0,23,333	1/1:0,19:19:47.64:416,48,0	0/0:6,0:6:17.98:0,18,179
chr10	31794442	.	G	GT	18818.17	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=6.864;DP=559;FS=3.689;HRun=1;HaplotypeScore=106.1046;InbreedingCoeff=0.9939;MQ=65.03;MQ0=1;MQRankSum=-1.420;QD=38.64;ReadPosRankSum=4.940;VQSLOD=4.8440;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,47:51:78.59:1669,79,0	1/1:0,7:7:18.06:269,18,0	0/0:24,0:23:63.16:0,63,774	0/0:29,0:27:73.77:0,74,917	1/1:0,18:18:39.13:582,39,0	1/1:1,20:20:57.19:854,57,0	1/1:0,22:22:60.20:898,60,0	1/1:1,22:23:69.23:1032,69,0	1/1:2,24:26:66.22:989,66,0	1/1:1,26:27:78.25:1143,78,0	1/1:0,10:9:24.05:334,24,0	1/1:2,15:17:45.15:667,45,0	1/1:1,17:17:48.16:719,48,0	1/1:0,24:24:69.23:1033,69,0	0/0:19,0:19:57.17:0,57,726	1/1:0,13:13:36.12:539,36,0	1/1:2,30:31:75.25:1123,75,0	1/1:0,29:29:81.27:1213,81,0	1/1:1,10:11:33.11:485,33,0	1/1:1,16:17:42.14:627,42,0	1/1:0,26:26:63.21:943,63,0	1/1:1,11:12:30.10:447,30,0	1/1:2,10:12:27.06:379,27,0	1/1:1,10:11:30.10:449,30,0	1/1:1,13:14:30.10:449,30,0	1/1:1,21:22:63.21:941,63,0	1/1:1,16:17:48.16:718,48,0	1/1:0,7:7:21.07:314,21,0
chr10	31794945	.	T	TA	592.73	PASS	AB=0.763;AC=16;AF=0.308;AN=52;BaseQRankSum=4.244;DP=280;FS=21.576;HRun=6;HaplotypeScore=86.0163;InbreedingCoeff=0.5341;MQ=77.77;MQ0=1;MQRankSum=-4.935;QD=7.14;ReadPosRankSum=-2.430;VQSLOD=-0.3875;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:16:34.90:0,35,205	1/1:0,5:4:12.04:140,12,0	0/0:11,0:9:7.55:0,8,112	0/1:22,0:19:0.91:1,0,263	1/1:1,5:6:15.04:177,15,0	0/1:4,3:7:46.28:91,0,46	0/1:3,4:3:15.42:30,0,15	1/1:5,4:5:6.02:72,6,0	0/1:3,2:5:12.91:37,0,13	0/0:14,0:14:37.41:0,37,208	0/0:17,0:16:40.26:0,40,230	0/0:14,0:14:29.40:0,29,190	0/0:6,0:6:8.74:0,9,52	0/0:6,0:6:11.67:0,12,72	0/0:6,0:6:18.04:0,18,183	0/0:8,0:8:20.43:0,20,127	0/0:19,2:20:49.60:0,50,293	0/0:15,0:15:34.71:0,35,192	1/1:5,3:5:3.01:35,3,0	1/1:3,1:4:3.01:35,3,0	./.	./.	0/0:9,0:9:17.35:0,17,96	0/0:3,0:3:8.91:0,9,61	0/0:14,0:14:12.11:0,12,158	0/0:17,0:17:43.38:0,43,247	1/1:3,6:8:14.93:141,15,0	0/0:16,0:16:46.24:0,46,248
chr10	31794964	.	GA	G	642.89	PASS	AB=0.615;AC=17;AF=0.327;AN=52;BaseQRankSum=2.721;DP=297;FS=14.801;HRun=8;HaplotypeScore=95.7962;InbreedingCoeff=0.8133;MQ=80.50;MQ0=3;MQRankSum=-5.890;QD=11.28;ReadPosRankSum=-1.914;VQSLOD=0.9276;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:17:39.11:0,39,460	1/1:1,4:4:9.01:82,9,0	0/0:18,0:12:16.45:0,16,218	0/0:25,0:23:33.57:0,34,330	1/1:1,4:5:12.01:111,12,0	0/1:3,5:7:87.12:94,0,87	1/1:2,6:4:5.99:51,6,0	1/1:2,9:5:15.02:144,15,0	1/1:1,3:3:6.48:59,6,0	0/0:16,0:16:45.14:0,45,543	0/0:18,0:17:39.12:0,39,469	0/0:11,0:11:30.09:0,30,362	0/0:6,0:6:18.05:0,18,215	0/0:9,0:9:21.06:0,21,254	0/0:1,0:9:20.13:0,20,102	0/0:8,0:8:18.06:0,18,217	0/0:24,0:23:51.16:0,51,614	0/0:16,0:15:45.14:0,45,543	1/1:1,6:4:12:109,12,0	1/1:0,3:2:6.01:57,6,0	./.	./.	0/0:8,0:8:15.05:0,15,181	0/0:3,0:3:9.03:0,9,108	0/0:16,0:16:39.11:0,39,451	0/0:15,0:15:39.12:0,39,471	1/1:0,6:5:14.75:122,15,0	0/0:19,0:19:39.12:0,39,469
chr10	31795039	.	GTTTTC	G	1421.52	PASS	AC=14;AF=0.304;AN=46;BaseQRankSum=1.969;DP=274;FS=6.362;HRun=0;HaplotypeScore=76.7625;InbreedingCoeff=0.8105;MQ=41.06;MQ0=12;MQRankSum=-6.026;QD=34.67;ReadPosRankSum=0.290;VQSLOD=2.9053;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:24:66.17:0,66,1800	./.	./.	0/0:11,0:1:0.47:0,0,1	./.	1/1:3,7:8:18.06:365,18,0	1/1:2,4:5:12.04:243,12,0	1/1:1,1:1:3.01:61,3,0	1/1:0,10:9:27.09:548,27,0	0/0:14,0:11:33.10:0,33,930	0/0:8,0:6:15.05:0,15,416	0/0:16,0:14:30.09:0,30,843	0/0:12,0:12:33.11:0,33,998	0/0:9,0:9:24.04:0,24,646	0/0:13,0:13:33.11:0,33,1000	0/0:13,0:11:30.10:0,30,874	0/0:18,0:17:48.16:0,48,1440	0/0:10,0:10:27.09:0,27,818	1/1:2,1:3:3.01:61,3,0	1/1:2,2:3:3.01:61,3,0	./.	./.	0/0:4,0:1:3.01:0,3,91	0/0:8,0:8:21.07:0,21,635	0/0:9,0:9:18.06:0,18,526	0/0:16,0:13:36.12:0,36,1088	1/1:2,4:6:12.04:243,12,0	0/0:18,0:18:54.17:0,54,1413
chr10	31795094	.	T	TA	11295.42	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=0.029;DP=324;FS=8.519;HRun=0;HaplotypeScore=45.5118;InbreedingCoeff=0.8084;MQ=63.15;MQ0=3;MQRankSum=-1.609;QD=40.78;ReadPosRankSum=3.102;VQSLOD=4.9335;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,23:22:66.23:1054,66,0	1/1:0,4:4:9.03:143,9,0	0/0:16,0:15:45.11:0,45,585	0/0:19,0:18:51.15:0,51,682	1/1:1,9:9:21.07:334,21,0	1/1:1,12:12:33.11:525,33,0	1/1:0,11:10:27.09:430,27,0	1/1:3,22:23:66.23:1053,66,0	1/1:0,13:13:32.98:525,33,0	1/1:0,12:12:33.11:527,33,0	1/1:0,6:6:18.06:287,18,0	1/1:0,13:12:21.07:335,21,0	1/1:0,7:7:18.06:287,18,0	1/1:0,6:6:15.05:239,15,0	0/0:12,0:12:36.12:0,36,502	1/1:0,13:13:33.11:527,33,0	1/1:0,22:22:63.21:1007,63,0	1/1:0,11:11:30.10:479,30,0	1/1:0,9:9:27.09:432,27,0	1/1:0,14:14:36.12:572,36,0	1/1:0,9:9:24.08:383,24,0	1/1:0,2:2:3.01:48,3,0	1/1:0,4:4:3.01:48,3,0	1/1:0,11:11:27.09:431,27,0	1/1:0,4:3:3.01:48,3,0	1/1:1,11:12:33.11:527,33,0	1/1:0,10:10:30.10:478,30,0	1/1:0,13:13:36.12:575,36,0
chr10	31795233	.	TAC	T	5055.65	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=8.385;DP=512;FS=3.215;HRun=0;HaplotypeScore=55.4633;InbreedingCoeff=0.9551;MQ=40.20;MQ0=28;MQRankSum=-6.116;QD=30.09;ReadPosRankSum=-1.383;VQSLOD=5.6574;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:25:54.16:0,54,988	1/1:1,14:11:18.03:275,18,0	0/0:35,0:3:9.03:0,9,168	0/0:30,0:1:3.01:0,3,58	1/1:1,17:15:20.96:321,21,0	1/1:1,16:16:36.12:549,36,0	1/1:1,12:12:21.07:321,21,0	1/1:2,14:13:39.04:521,39,0	1/1:1,15:15:33.11:504,33,0	0/0:29,0:27:78.23:0,78,1462	0/0:22,0:19:42.14:0,42,788	0/0:20,0:17:36.11:0,36,659	0/0:17,0:14:30.10:0,30,576	0/0:15,0:14:30.10:0,30,576	0/0:22,0:22:60.21:0,60,1138	0/0:10,0:10:24.08:0,24,463	0/0:14,0:13:36.12:0,36,680	0/0:18,0:16:39.13:0,39,753	1/1:0,15:15:42.14:642,42,0	1/1:1,16:12:27.09:412,27,0	1/1:0,20:18:45.15:687,45,0	0/0:9,0:9:11.97:0,12,191	0/0:15,0:15:36.11:0,36,645	0/0:15,1:12:21.07:0,21,394	0/0:16,0:16:36.12:0,36,687	0/0:22,0:20:54.16:0,54,1005	1/1:0,21:21:54.18:824,54,0	0/0:8,0:8:15.03:0,15,256
chr10	31795364	.	ATGGTGC	A	5119.34	PASS	AB=0.727;AC=35;AF=0.921;AN=38;BaseQRankSum=7.654;DP=246;FS=24.174;HRun=0;HaplotypeScore=47.7036;InbreedingCoeff=0.2947;MQ=26.96;MQ0=26;MQRankSum=-6.066;QD=27.09;ReadPosRankSum=3.818;VQSLOD=2.6124;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,7:5:6.02:127,6,0	./.	./.	./.	1/1:3,5:4:3.01:70,3,0	1/1:6,15:11:9.03:210,9,0	0/1:5,3:6:96.57:131,0,97	./.	1/1:2,9:10:9.03:210,9,0	1/1:2,12:9:24.08:560,24,0	1/1:1,4:3:6.02:140,6,0	1/1:4,13:9:15.05:350,15,0	1/1:1,9:5:12.04:280,12,0	1/1:1,12:12:24.08:559,24,0	0/0:31,0:30:78.02:0,78,2586	1/1:2,12:8:15.05:350,15,0	1/1:0,3:3:3.01:38,3,0	1/1:3,4:5:6.02:140,6,0	1/1:1,2:2:6.02:140,6,0	./.	./.	./.	./.	./.	1/1:3,7:6:9.03:210,9,0	1/1:2,10:10:27.09:629,27,0	1/1:1,19:16:36.12:838,36,0	1/1:2,2:3:6.02:140,6,0
chr10	31797109	.	AAG	A	1234.79	PASS	AB=1.000;AC=48;AF=0.857;AN=56;BaseQRankSum=5.058;DP=333;FS=19.808;HRun=0;HaplotypeScore=117.0981;InbreedingCoeff=0.5353;MQ=52.96;MQ0=0;MQRankSum=-3.517;QD=4.19;ReadPosRankSum=1.439;VQSLOD=1.6182;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:23,1:24:25.61:117,26,0	1/1:3,0:3:2.92:8,3,0	0/0:16,0:13:31.61:0,32,498	0/0:11,0:9:27.09:0,27,458	1/1:11,2:13:9.58:58,10,0	1/1:6,1:7:9.55:40,10,0	1/1:6,0:6:11.70:39,12,0	1/1:29,2:31:59.79:243,60,0	1/1:8,0:8:6.04:17,6,0	1/1:8,1:9:6.02:41,6,0	0/1:8,0:8:2.21:13,0,2	1/1:11,0:11:5.69:19,6,0	1/1:9,0:8:8.43:28,8,0	1/1:13,0:13:12.41:38,12,0	0/0:11,0:11:24.06:0,24,402	1/1:12,0:11:14.21:44,14,0	1/1:17,0:17:18.89:69,19,0	1/1:14,0:13:23.92:92,24,0	1/1:13,1:14:17.68:67,18,0	1/1:11,1:11:6.54:26,7,0	1/1:8,0:8:6.46:31,6,0	1/1:4,0:4:2.80:9,3,0	1/1:10,0:10:4.14:25,4,0	1/1:8,1:9:12.53:70,13,0	0/1:9,0:8:3.18:33,0,3	1/1:25,1:26:34.14:150,34,0	1/1:12,0:12:18.02:90,18,0	1/1:6,0:6:5.91:15,6,0
chr10	31797110	.	AG	A	5127.60	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=6.029;DP=328;FS=37.656;HRun=1;HaplotypeScore=97.9272;InbreedingCoeff=0.9049;MQ=57.16;MQ0=0;MQRankSum=-5.767;QD=17.80;ReadPosRankSum=2.672;VQSLOD=3.1262;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:23,1:24:56.47:381,56,0	1/1:1,1:2:5.93:58,6,0	0/0:17,0:14:32.91:0,33,409	0/0:13,0:11:33.11:0,33,463	1/1:13,0:13:34.79:241,35,0	1/1:6,0:6:17.66:115,18,0	1/1:6,0:6:17.82:130,18,0	1/1:27,3:30:87.52:680,88,0	1/1:8,0:8:23.12:139,23,0	1/1:9,0:9:20.25:116,20,0	1/1:8,0:8:11.17:117,11,0	1/1:10,1:11:29.09:191,29,0	1/1:7,2:8:14.91:114,15,0	1/1:13,0:13:35.18:218,35,0	0/0:10,0:10:24.07:0,24,325	1/1:11,1:11:29.49:214,29,0	1/1:15,1:16:41.17:294,41,0	1/1:14,0:13:34.90:260,35,0	1/1:14,0:14:35.12:237,35,0	1/1:10,0:10:29.04:160,29,0	1/1:8,0:8:18.11:112,18,0	1/1:3,1:4:8.77:53,9,0	1/1:9,1:10:26.01:167,26,0	1/1:8,0:8:20.58:145,21,0	1/1:8,1:8:20.41:128,20,0	1/1:25,1:26:76.69:515,77,0	1/1:10,2:12:30.57:253,31,0	1/1:6,0:6:14.69:90,15,0
chr10	31797114	.	A	AT	10790.34	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=4.454;DP=341;FS=36.741;HRun=0;HaplotypeScore=81.5461;InbreedingCoeff=0.9103;MQ=61.32;MQ0=0;MQRankSum=-6.625;QD=36.21;ReadPosRankSum=2.407;VQSLOD=2.6478;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,19:24:59.95:826,60,0	1/1:1,1:2:6.02:86,6,0	0/0:20,0:17:39.12:0,39,513	0/0:13,0:11:33.10:0,33,447	1/1:4,10:14:35.95:497,36,0	1/1:2,5:7:18.06:282,18,0	1/1:1,6:7:18.06:286,18,0	1/1:11,22:33:89.98:1259,90,0	1/1:1,6:7:21.06:309,21,0	1/1:3,5:8:21.02:291,21,0	1/1:2,7:9:20.60:328,21,0	1/1:4,7:11:30.08:419,30,0	1/1:6,5:10:12.04:188,12,0	1/1:1,12:13:36.12:568,36,0	0/0:10,0:10:24.08:0,24,336	1/1:3,11:13:33.06:485,33,0	1/1:2,14:16:42.07:623,42,0	1/1:4,9:12:34.61:490,35,0	1/1:5,9:14:35.72:456,36,0	1/1:3,9:12:30.10:462,30,0	1/1:5,4:9:17.86:223,18,0	1/1:1,3:4:9.03:142,9,0	1/1:4,7:11:29.84:372,30,0	1/1:2,6:8:20.94:279,21,0	1/1:2,6:7:15.90:280,16,0	1/1:8,19:27:77.77:1064,78,0	1/1:6,4:10:26.91:340,27,0	1/1:1,5:6:15.05:237,15,0
chr10	31797147	.	T	TA	12133.89	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-0.902;DP=391;FS=13.564;HRun=2;HaplotypeScore=68.2885;InbreedingCoeff=0.9182;MQ=72.21;MQ0=0;MQRankSum=-8.465;QD=34.28;ReadPosRankSum=2.011;VQSLOD=3.8903;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,28:30:72.11:964,72,0	1/1:0,2:2:6.02:86,6,0	0/0:13,0:13:39.03:0,39,420	0/0:9,0:9:21.05:0,21,242	1/1:0,12:12:33.11:474,33,0	1/1:1,13:14:36.08:495,36,0	1/1:0,12:12:36.09:496,36,0	1/1:11,21:32:63.17:883,63,0	1/1:0,12:12:33.03:429,33,0	1/1:2,16:18:45.15:637,45,0	1/1:1,7:8:15.01:192,15,0	1/1:1,7:8:21.04:280,21,0	1/1:1,8:9:24.08:345,24,0	1/1:1,9:10:24.04:307,24,0	0/0:15,0:15:42.12:0,42,508	1/1:0,13:12:33.11:474,33,0	1/1:2,21:23:60.16:837,60,0	1/1:4,12:15:30.08:413,30,0	1/1:0,18:18:54.18:777,54,0	1/1:2,9:11:21.07:302,21,0	1/1:2,18:20:51.13:709,51,0	1/1:1,8:9:18.06:258,18,0	1/1:2,13:15:36.12:517,36,0	1/1:0,14:14:36.08:495,36,0	1/1:2,3:5:12:149,12,0	1/1:2,29:30:87.25:1228,87,0	1/1:0,9:9:18.06:258,18,0	1/1:0,3:3:9.03:130,9,0
chr10	31797320	.	T	TTCTTAAC	13120.72	PASS	AC=46;AF=0.885;AN=52;BaseQRankSum=1.910;DP=350;FS=178.777;HRun=0;HaplotypeScore=90.9734;InbreedingCoeff=0.7132;MQ=63.01;MQ0=0;MQRankSum=-9.482;QD=47.37;ReadPosRankSum=2.459;VQSLOD=1.5532;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,11:23:30.10:1129,30,0	./.	0/0:14,0:12:27.09:0,27,546	0/0:22,0:22:30.23:0,30,429	1/1:3,3:7:9.03:257,9,0	1/1:5,6:12:24.08:838,24,0	1/1:7,6:14:15.05:572,15,0	1/1:13,8:22:27.09:956,27,0	1/1:6,6:13:15.05:571,15,0	1/1:3,5:8:18.06:504,18,0	./.	1/1:5,5:10:21.07:792,21,0	1/1:5,3:9:12.04:456,12,0	1/1:5,3:9:15.05:452,15,0	0/0:33,0:32:72.23:0,72,1698	1/1:7,6:13:30.10:1071,30,0	1/1:9,3:12:18.06:682,18,0	1/1:3,1:4:3.01:115,3,0	1/1:9,4:12:21.07:736,21,0	1/1:4,3:7:6.02:229,6,0	1/1:13,3:19:6.02:207,6,0	1/1:6,1:8:3.01:114,3,0	1/1:7,1:8:6.02:187,6,0	1/1:7,4:12:9.03:301,9,0	1/1:8,3:11:9.03:335,9,0	1/1:7,11:19:42.14:1525,42,0	1/1:7,6:15:21.07:748,21,0	1/1:5,3:8:9.03:344,9,0
chr10	31797441	.	T	TGGCCCACCAGTGTGGCTGGTTG	27898.79	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=5.165;DP=280;FS=146.139;HRun=0;HaplotypeScore=250.8922;InbreedingCoeff=0.7052;MQ=79.31;MQ0=0;MQRankSum=-10.523;QD=130.37;ReadPosRankSum=0.458;VQSLOD=1.6916;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,1:10:18.03:1198,18,0	1/1:3,0:3:8.99:477,9,0	0/0:20,0:19:35.65:0,36,2140	0/0:13,0:10:27.09:0,27,1214	1/1:13,2:16:28.72:1767,29,0	1/1:6,1:9:20.89:1220,21,0	1/1:13,0:13:30.10:2407,30,0	1/1:17,0:16:25.32:1430,25,0	1/1:4,1:5:9.92:510,10,0	1/1:9,6:16:34.55:2927,35,0	1/1:7,3:10:21.06:1268,21,0	1/1:2,2:4:12.04:832,12,0	1/1:6,0:6:12:807,12,0	1/1:3,0:3:3.01:96,3,0	0/0:33,0:33:96.29:0,96,5089	1/1:7,0:7:12.51:601,13,0	1/1:3,0:3:8.99:637,9,0	1/1:2,0:2:3.01:315,3,0	1/1:9,0:9:15.05:628,15,0	1/1:11,2:13:24.72:1298,25,0	1/1:5,0:5:5.95:518,6,0	1/1:7,3:10:23.48:1065,23,0	1/1:12,2:14:39.07:1551,39,0	1/1:5,0:5:6.02:627,6,0	1/1:5,2:8:15.05:1056,15,0	1/1:7,4:12:12.67:2016,13,0	1/1:9,3:12:33.11:2330,33,0	1/1:1,1:2:3.48:317,3,0
chr10	31798055	.	TATTC	T	2075.49	PASS	AB=0.776;AC=25;AF=0.463;AN=54;BaseQRankSum=-3.188;DP=236;FS=20.489;HRun=0;HaplotypeScore=63.6725;InbreedingCoeff=0.0662;MQ=63.50;MQ0=0;MQRankSum=-4.349;QD=16.74;ReadPosRankSum=1.428;VQSLOD=1.6575;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:4,8:12:41.59:183,0,42	0/1:3,0:3:11.97:12,0,92	0/0:11,0:10:13.65:0,14,595	0/0:16,0:14:31.31:0,31,450	0/1:9,0:9:1.31:1,0,110	0/0:14,0:14:38.94:0,39,611	0/1:7,0:7:18.97:19,0,177	0/0:13,0:12:36.07:0,36,556	0/0:18,0:18:52.28:0,52,687	1/1:0,5:5:15.05:282,15,0	1/1:0,7:7:18.02:304,18,0	0/1:4,5:7:56.78:115,0,57	0/1:5,2:6:46.85:57,0,47	0/1:2,4:6:15.18:137,0,15	0/0:23,0:23:63.06:0,63,1500	0/1:4,2:6:86.96:116,0,87	1/1:0,8:7:9.03:161,9,0	0/1:2,4:6:22.55:104,0,23	0/1:8,0:8:0.64:1,0,174	0/0:8,0:8:0.42:0,0,187	0/1:6,0:6:21.09:21,0,131	./.	1/1:0,7:7:14.98:240,15,0	0/1:1,3:4:11.21:43,0,11	1/1:0,6:6:9.03:170,9,0	0/1:1,5:5:0.98:170,0,1	0/0:8,0:7:21.07:0,21,363	1/1:0,2:2:6.02:113,6,0
chr10	31798268	.	C	CT	2600.10	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=3.957;DP=436;FS=16.862;HRun=2;HaplotypeScore=99.8148;InbreedingCoeff=0.8849;MQ=57.05;MQ0=3;MQRankSum=-9.859;QD=15.76;ReadPosRankSum=-0.713;VQSLOD=2.3109;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:17,5:22:33.51:326,34,0	0/0:10,0:10:27:0,27,284	0/0:22,0:15:24.18:0,24,195	0/0:10,0:3:2.77:0,3,26	0/0:27,0:27:75.04:0,75,810	0/0:21,0:21:63.18:0,63,754	0/0:22,0:22:63.17:0,63,738	0/0:26,0:26:68.75:0,69,733	0/0:24,0:24:66.19:0,66,786	1/1:10,1:11:18.02:184,18,0	1/1:11,4:15:21:203,21,0	1/1:10,1:8:1.23:161,1,0	1/1:7,3:10:12.02:120,12,0	1/1:1,3:4:12.03:126,12,0	0/0:18,0:18:29.67:0,30,184	1/1:4,7:11:27.05:268,27,0	1/1:14,6:20:26.04:338,26,0	1/1:5,2:6:9.02:97,9,0	0/0:26,0:26:69.12:0,69,779	0/0:20,0:20:60.09:0,60,664	0/0:19,0:19:54.13:0,54,617	1/1:3,1:4:6.01:59,6,0	1/1:4,2:6:9.02:93,9,0	1/1:7,2:9:15.50:151,15,0	1/1:10,2:12:15.03:151,15,0	1/1:13,5:18:53.63:492,54,0	0/0:25,0:25:75.13:0,75,847	1/1:5,0:5:6:51,6,0
chr10	31798270	.	T	TTA	5618.60	PASS	AB=0.559;AC=31;AF=0.554;AN=56;BaseQRankSum=4.407;DP=501;FS=8.412;HRun=0;HaplotypeScore=135.9742;InbreedingCoeff=0.8676;MQ=54.61;MQ0=4;MQRankSum=-11.168;QD=23.81;ReadPosRankSum=-2.930;VQSLOD=4.8331;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:22,14:36:65.68:782,66,0	0/0:9,0:9:27.01:0,27,343	0/0:21,0:14:13.61:0,14,212	0/0:11,0:3:5.56:0,6,37	0/0:29,0:29:77.52:0,78,1012	0/0:25,0:25:43.75:0,44,930	0/0:22,0:22:66.14:0,66,937	0/0:26,0:26:71.57:0,72,893	0/0:23,0:23:66.21:0,66,990	1/1:7,9:16:32.20:349,32,0	1/1:5,10:15:21.03:329,21,0	1/1:9,5:11:10.62:380,11,0	1/1:8,6:15:23.28:245,23,0	1/1:9,0:9:26.79:355,27,0	0/1:4,0:19:71.73:72,0,73	1/1:12,3:15:38.70:532,39,0	1/1:8,10:20:41.26:594,41,0	1/1:9,3:11:21.78:271,22,0	0/0:25,0:25:72.09:0,72,982	0/0:27,0:27:62.94:0,63,840	0/0:21,0:21:60.06:0,60,807	1/1:4,0:4:6.01:73,6,0	1/1:4,4:8:14.57:175,15,0	1/1:4,2:8:14.99:260,15,0	1/1:4,10:14:20.77:292,21,0	1/1:9,13:22:65.52:860,66,0	0/0:25,0:25:75.16:0,75,1055	1/1:5,0:5:6:51,6,0
chr10	31798279	.	A	AAAAAAG	6280.98	PASS	AB=0.993;AC=35;AF=0.625;AN=56;BaseQRankSum=-5.584;DP=506;FS=8.916;HRun=0;HaplotypeScore=148.8873;InbreedingCoeff=0.6106;MQ=55.20;MQ0=4;MQRankSum=-7.792;QD=19.21;ReadPosRankSum=-7.772;VQSLOD=0.6986;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:36,5:39:67.05:767,67,0	0/1:10,0:10:19.72:20,0,187	0/0:23,0:11:26.89:0,27,378	0/1:9,0:2:1.97:2,0,5	0/0:28,0:28:13.15:0,13,523	0/1:28,0:29:77.05:77,0,580	0/0:22,0:22:18.26:0,18,583	0/1:27,0:27:34.57:35,0,439	0/0:21,0:21:39.29:0,39,642	1/1:17,1:18:37.96:323,38,0	1/1:10,4:13:26.84:566,27,0	1/1:10,1:17:17.72:243,18,0	1/1:11,3:14:28.99:379,29,0	1/1:8,3:11:27.15:367,27,0	0/0:17,0:17:21.30:0,21,93	1/1:10,6:17:46.88:760,47,0	1/1:16,5:21:47.03:681,47,0	1/1:9,1:10:23.77:289,24,0	0/1:27,0:27:89.30:89,0,498	0/0:25,0:25:4.90:0,5,493	0/0:18,0:18:23.10:0,23,469	1/1:5,1:6:14.79:173,15,0	1/1:7,1:9:23.79:294,24,0	1/1:6,1:7:14.74:220,15,0	1/1:12,2:14:23.57:281,24,0	1/1:16,5:21:53.97:668,54,0	0/0:25,0:25:42:0,42,636	1/1:2,0:2:5.99:48,6,0
chr10	31799244	.	T	TCTTC	20991.27	PASS	AB=1.000;AC=51;AF=0.911;AN=56;BaseQRankSum=0.579;DP=481;FS=25.157;HRun=0;HaplotypeScore=143.1226;InbreedingCoeff=0.7263;MQ=59.12;MQ0=1;MQRankSum=-4.503;QD=50.34;ReadPosRankSum=6.990;VQSLOD=3.6876;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,19:26:39.11:908,39,0	1/1:1,5:6:15.05:380,15,0	0/0:29,0:21:43.30:0,43,589	0/0:35,0:26:22.05:0,22,561	1/1:1,15:17:36.08:852,36,0	1/1:4,8:12:15.05:380,15,0	1/1:2,7:9:18.06:454,18,0	1/1:3,27:30:78.13:1618,78,0	1/1:3,15:18:33.11:836,33,0	1/1:3,14:18:43.39:1046,43,0	1/1:8,16:24:60.04:1299,60,0	1/1:2,11:13:24.08:599,24,0	1/1:4,8:11:17.99:455,18,0	1/1:3,17:20:33.11:835,33,0	1/1:5,14:19:35.29:934,35,0	1/1:1,15:16:36.12:906,36,0	1/1:3,18:21:39.13:988,39,0	0/1:3,0:3:3.45:15,0,3	1/1:5,16:21:45.11:956,45,0	1/1:6,19:25:66.16:1545,66,0	1/1:6,9:15:11.83:531,12,0	1/1:0,10:10:27.04:622,27,0	1/1:2,15:17:39.13:986,39,0	1/1:1,10:11:0.49:362,0,0	1/1:1,7:8:21.07:532,21,0	1/1:0,15:15:45.15:1139,45,0	1/1:2,13:16:42.14:1060,42,0	1/1:2,13:15:27.27:755,27,0
chr10	31799289	.	C	CG	364.11	PASS	AB=0.790;AC=12;AF=0.214;AN=56;BaseQRankSum=-8.555;DP=347;FS=1.833;HRun=0;HaplotypeScore=175.5984;InbreedingCoeff=-0.0794;MQ=30.90;MQ0=12;MQRankSum=0.527;QD=2.55;ReadPosRankSum=3.435;VQSLOD=3.1367;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:14,3:15:22.01:22,0,148	0/0:6,0:5:14.89:0,15,130	0/1:9,0:5:9.96:10,0,153	0/0:5,0:1:2.99:0,3,24	0/0:14,0:14:25.78:0,26,215	0/0:8,1:9:6.73:0,7,116	0/1:4,4:6:8.46:29,0,8	1/1:3,12:13:29.10:193,29,0	0/0:14,1:14:17.02:0,17,229	0/1:7,3:10:25.18:25,0,146	0/0:12,1:11:16.23:0,16,146	0/0:8,1:8:18.04:0,18,189	0/0:10,3:12:3.58:0,4,226	0/0:13,1:12:24.43:0,24,227	0/1:11,7:18:25.01:25,0,250	0/0:15,0:15:41.81:0,42,437	0/1:13,3:15:12.29:12,0,151	0/1:3,2:4:25.29:28,0,25	0/1:9,2:10:1.70:2,0,134	0/0:21,1:22:37.31:0,37,455	0/1:10,3:12:37.15:37,0,146	0/0:11,2:12:11.22:0,11,188	0/0:15,5:20:4.66:0,5,254	0/0:9,0:8:8.06:0,8,104	0/0:10,0:8:19.56:0,20,178	0/1:11,10:21:99:130,0,209	0/0:13,1:14:18.24:0,18,236	0/0:3,0:3:8.85:0,9,57
chr10	31799293	.	CT	C	118.04	PASS	AB=0.802;AC=8;AF=0.148;AN=54;BaseQRankSum=-8.362;DP=345;FS=6.566;HRun=2;HaplotypeScore=171.0425;InbreedingCoeff=0.3143;MQ=28.13;MQ0=14;MQRankSum=0.586;QD=1.51;ReadPosRankSum=6.794;VQSLOD=-0.6820;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:12,3:15:25.71:26,0,123	0/0:7,0:6:14.98:0,15,152	0/0:5,0:2:6.02:0,6,83	./.	0/0:15,0:15:26.78:0,27,233	0/0:7,1:8:8.28:0,8,131	0/1:4,4:6:3.63:4,0,4	1/1:5,12:15:31.22:135,31,0	0/0:14,1:14:27.01:0,27,279	0/0:7,3:10:1.74:0,2,181	0/0:10,1:9:13.25:0,13,137	0/0:8,1:8:18.03:0,18,197	0/0:10,3:12:15.64:0,16,240	0/0:12,1:11:26.53:0,27,265	0/0:12,7:19:2.17:0,2,262	0/0:16,0:16:42.05:0,42,467	0/0:14,3:16:18.84:0,19,231	1/1:3,2:4:7.42:29,7,0	0/0:10,2:12:18.99:0,19,288	0/0:21,1:22:45.36:0,45,457	0/0:11,2:12:2:0,2,121	0/0:11,2:12:21.05:0,21,268	0/0:15,4:20:19.42:0,19,279	0/1:10,0:9:2.47:2,0,97	0/0:10,0:8:17.59:0,18,184	0/1:10,10:20:51:51,0,287	0/0:10,1:11:15.77:0,16,216	0/0:4,0:3:3:0,3,26
chr10	31799297	.	CT	C	223.04	PASS	AB=0.979;AC=9;AF=0.173;AN=52;BaseQRankSum=-8.548;DP=333;FS=1.975;HRun=2;HaplotypeScore=161.3198;InbreedingCoeff=0.2030;MQ=28.49;MQ0=15;MQRankSum=-1.062;QD=2.53;ReadPosRankSum=4.981;VQSLOD=-0.0127;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:15,2:15:60.43:60,0,120	0/0:5,0:4:12.04:0,12,158	./.	./.	0/0:14,1:15:30.50:0,30,309	0/0:8,0:8:3.93:0,4,113	1/1:7,1:5:6.27:20,6,0	1/1:16,2:15:35.19:202,35,0	0/0:15,0:14:24.22:0,24,267	0/1:10,0:10:11.72:12,0,144	0/0:14,0:12:16.69:0,17,153	0/0:10,0:9:20.95:0,21,200	0/0:14,0:13:19.36:0,19,221	0/0:13,0:11:26.48:0,26,253	0/0:19,0:19:46.56:0,47,350	0/0:16,0:16:42.02:0,42,434	0/0:14,0:13:7.48:0,7,162	0/1:6,0:5:13.64:22,0,14	0/0:11,2:12:6.50:0,6,206	0/0:21,0:21:42.01:0,42,403	0/0:11,0:10:9.41:0,9,134	0/0:15,0:14:30.10:0,30,312	0/0:12,1:17:7.31:0,7,183	0/1:9,0:8:23.80:24,0,78	0/0:10,0:8:12.73:0,13,133	0/1:20,0:20:23.69:24,0,229	0/0:9,0:9:8.61:0,9,155	0/0:2,0:1:2.98:0,3,21
chr10	31800185	.	C	CATCTAAA	7779.50	PASS	AB=0.807;AC=15;AF=0.268;AN=56;BaseQRankSum=15.819;DP=661;FS=156.368;HRun=0;HaplotypeScore=188.5666;InbreedingCoeff=-0.3664;MQ=75.07;MQ0=0;MQRankSum=-15.143;QD=18.70;ReadPosRankSum=0.230;VQSLOD=0.5962;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:54,10:64:99:733,0,3655	0/0:8,0:8:24.08:0,24,667	0/0:13,0:13:19.14:0,19,642	0/0:17,0:17:30.90:0,31,841	0/0:23,0:23:63.22:0,63,1715	0/0:21,0:21:63.22:0,63,1693	0/0:14,0:13:42.13:0,42,1090	0/0:28,0:28:81.28:0,81,2158	0/0:23,0:23:69.24:0,69,1852	0/1:22,12:34:99:887,0,1721	0/1:22,11:33:99:855,0,1736	0/1:21,5:26:99:391,0,1574	0/1:22,6:28:99:473,0,1600	0/1:10,2:12:99:149,0,680	0/0:15,0:15:42.14:0,42,1161	0/1:14,5:19:99:412,0,1114	0/1:19,6:25:99:417,0,1475	0/1:17,1:18:46.31:46,0,1251	0/0:24,0:24:72.25:0,72,1976	0/0:25,0:25:75.24:0,75,1981	0/0:16,0:16:45.15:0,45,1183	0/1:19,11:29:99:641,0,1381	0/1:15,10:24:99:749,0,1021	0/1:22,5:27:99:256,0,1642	0/1:21,14:34:99:1101,0,1608	0/1:19,6:25:99:523,0,1424	0/0:18,0:18:51.16:0,51,1325	0/1:13,2:15:99:146,0,1010
chr10	31801523	.	CTTT	C	13934.96	PASS	AB=0.941;AC=53;AF=0.946;AN=56;BaseQRankSum=-4.272;DP=575;FS=1.124;HRun=13;HaplotypeScore=98.3771;InbreedingCoeff=0.6778;MQ=62.82;MQ0=0;MQRankSum=0.718;QD=24.53;ReadPosRankSum=4.209;VQSLOD=4.2350;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,14:19:26.62:311,27,0	1/1:1,9:11:23.96:273,24,0	0/1:15,1:15:2.36:2,0,181	0/0:7,0:5:11.95:0,12,143	1/1:7,24:31:57.05:693,57,0	1/1:1,31:33:75.16:912,75,0	1/1:3,13:17:31.42:398,31,0	1/1:11,28:35:43.28:775,43,0	1/1:3,19:22:47.73:583,48,0	1/1:4,23:28:71.43:794,71,0	1/1:3,24:27:50.90:599,51,0	1/1:3,20:23:57.13:691,57,0	1/1:4,12:16:33.05:402,33,0	1/1:0,18:19:51.07:602,51,0	1/1:4,18:22:48.08:584,48,0	1/1:3,13:16:33.04:401,33,0	1/1:6,14:21:1.58:348,2,0	1/1:3,15:18:33.07:401,33,0	1/1:4,12:15:35.71:395,36,0	1/1:3,23:26:66.14:801,66,0	1/1:3,11:14:27.01:325,27,0	1/1:2,13:16:28.33:359,28,0	1/1:4,19:23:54.11:653,54,0	1/1:3,13:16:27.04:325,27,0	1/1:2,18:21:57.08:672,57,0	1/1:3,23:26:66.14:798,66,0	1/1:2,19:21:51.02:601,51,0	1/1:0,10:10:20.98:236,21,0
chr10	31801978	.	A	AGT	484.96	PASS	AB=0.991;AC=13;AF=0.232;AN=56;BaseQRankSum=7.689;DP=608;FS=3.329;HRun=0;HaplotypeScore=129.6888;InbreedingCoeff=0.2541;MQ=53.01;MQ0=20;MQRankSum=-5.085;QD=2.34;ReadPosRankSum=-0.292;VQSLOD=2.3396;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:13.38:0,13,121	0/0:9,0:8:8.54:0,9,44	0/0:17,0:4:2.12:0,2,48	0/0:22,0:14:32.63:0,33,288	1/1:20,0:20:6.47:27,6,0	0/0:33,0:33:36.11:0,36,240	0/1:23,0:23:4.59:34,0,5	0/1:38,0:34:99:273,0,168	0/1:27,0:27:26.51:27,0,31	0/0:25,0:24:56.77:0,57,480	0/1:19,0:19:14.64:15,0,55	0/0:18,0:18:12.68:0,13,125	0/0:23,0:22:15.56:0,16,90	0/0:17,0:15:2.05:0,2,43	0/0:25,0:24:13.77:0,14,113	0/0:26,0:26:5.85:0,6,106	0/0:27,0:27:19.71:0,20,151	0/0:15,0:15:0.13:0,0,18	0/1:21,1:19:99:157,0,142	1/1:8,17:24:2.91:18,3,0	1/1:11,0:10:2.58:19,3,0	0/0:16,0:16:9.82:0,10,61	0/0:26,0:26:10.02:0,10,87	0/0:32,0:32:10.74:0,11,159	0/0:13,0:13:1.28:0,1,27	0/0:19,0:19:28.94:0,29,230	1/1:22,0:20:11.56:65,12,0	0/0:16,0:13:26.81:0,27,195
chr10	31801980	.	A	AGT	1066.62	PASS	AB=0.894;AC=17;AF=0.304;AN=56;BaseQRankSum=9.508;DP=601;FS=10.146;HRun=0;HaplotypeScore=128.5911;InbreedingCoeff=0.3318;MQ=55.31;MQ0=20;MQRankSum=-4.650;QD=4.44;ReadPosRankSum=1.084;VQSLOD=2.3421;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:10.38:0,10,97	1/1:10,0:9:8.88:60,9,0	0/0:17,0:4:8.61:0,9,73	0/0:24,0:16:41.51:0,42,352	1/1:4,16:20:6.89:75,7,0	1/1:30,1:31:11.70:265,12,0	1/1:20,1:21:17.11:121,17,0	0/1:36,0:32:99:239,0,124	0/1:5,21:26:9.44:170,0,9	0/0:25,0:24:58.42:0,58,462	0/1:20,0:20:22.52:23,0,50	0/0:19,0:19:6.54:0,7,117	0/0:22,0:21:13.03:0,13,59	0/0:17,0:15:2.05:0,2,43	0/0:25,0:24:13.78:0,14,115	0/0:27,0:27:5.80:0,6,94	0/0:26,0:26:14.37:0,14,127	0/0:16,0:16:0.12:0,0,16	0/1:22,0:19:91.96:184,0,92	1/1:23,0:23:3:28,3,0	0/1:10,0:10:7.11:15,0,7	0/0:16,0:16:6.83:0,7,37	0/0:25,0:25:1.09:0,1,22	0/0:32,0:32:11.25:0,11,162	0/0:12,0:12:0.31:0,0,23	0/0:19,0:19:27.52:0,28,222	1/1:4,0:19:4.91:54,5,0	0/0:16,0:13:29.75:0,30,210
chr10	31801984	.	A	AGT	2587.19	PASS	AB=0.953;AC=38;AF=0.704;AN=54;BaseQRankSum=7.149;DP=572;FS=17.695;HRun=0;HaplotypeScore=115.2720;InbreedingCoeff=0.0940;MQ=57.07;MQ0=17;MQRankSum=-2.759;QD=5.31;ReadPosRankSum=3.057;VQSLOD=1.7331;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:23:14.11:19,0,14	1/1:10,0:9:14.79:101,15,0	0/0:18,0:5:8.17:0,8,110	0/0:24,0:16:37.93:0,38,353	1/1:20,0:20:9.90:125,10,0	1/1:25,0:25:31.74:303,32,0	1/1:20,0:20:14.23:108,14,0	1/1:33,0:29:69.31:409,69,0	0/1:24,0:24:9.08:171,0,9	0/1:25,0:24:18.50:324,0,18	1/1:19,0:19:0.34:29,0,0	0/1:19,0:19:25.42:47,0,25	1/1:22,0:21:6.34:33,6,0	0/1:16,0:14:0.94:1,0,20	0/0:24,0:24:4.80:0,5,42	0/1:26,0:26:33.02:33,0,36	1/1:24,1:25:8.29:115,8,0	1/1:15,0:15:1.82:5,2,0	1/1:20,0:17:31.72:239,32,0	./.	1/1:10,0:10:3.17:20,3,0	1/1:18,0:18:5.39:35,5,0	0/1:5,16:22:2.59:47,0,3	0/1:31,1:32:28.63:68,0,29	0/1:12,0:12:0.95:1,0,18	1/1:19,0:19:21.12:313,21,0	1/1:18,0:17:6.01:56,6,0	0/1:14,0:12:16.13:141,0,16
chr10	31801986	.	A	AGTGT	6000.94	PASS	AB=1.000;AC=44;AF=0.815;AN=54;BaseQRankSum=2.107;DP=560;FS=5.332;HRun=0;HaplotypeScore=113.0114;InbreedingCoeff=0.3234;MQ=58.18;MQ0=16;MQRankSum=-2.342;QD=12.37;ReadPosRankSum=3.353;VQSLOD=3.9396;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:20:2.66:46,3,0	1/1:10,0:9:15.05:201,15,0	0/0:18,0:5:3.05:0,3,195	0/0:25,0:17:35.88:0,36,688	1/1:21,0:21:14.55:164,15,0	1/1:23,0:23:45.02:608,45,0	1/1:20,0:20:13.08:94,13,0	1/1:34,0:30:84.20:1017,84,0	1/1:24,0:24:6.42:128,6,0	1/1:24,0:23:41.23:727,41,0	./.	1/1:3,13:18:9.65:331,10,0	1/1:21,0:20:9.01:128,9,0	0/0:14,0:12:2.99:0,3,23	0/1:23,0:23:11.73:12,0,27	0/1:23,0:23:15.91:99,0,16	1/1:4,3:26:17.36:336,17,0	1/1:15,0:15:3.01:43,3,0	1/1:22,0:19:43.95:513,44,0	0/1:20,0:20:0:0,0,0	1/1:10,0:10:8.26:70,8,0	1/1:0,16:18:6.18:69,6,0	1/1:22,0:22:4.94:72,5,0	1/1:26,3:29:12.89:227,13,0	1/1:12,0:12:2.84:14,3,0	1/1:18,1:19:20.21:634,20,0	1/1:18,0:17:6.02:154,6,0	0/1:13,0:12:10.85:312,0,11
chr10	31801988	.	A	AGTGTGTGTGT	9538.69	PASS	AB=0.569;AC=41;AF=0.854;AN=48;BaseQRankSum=2.151;DP=614;FS=1.674;HRun=0;HaplotypeScore=143.9513;InbreedingCoeff=0.5225;MQ=60.93;MQ0=15;MQRankSum=-4.126;QD=19.75;ReadPosRankSum=1.117;VQSLOD=4.1552;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,0:25:2.80:56,3,0	1/1:13,0:12:15.05:447,15,0	0/0:20,0:7:18.06:0,18,432	0/0:28,0:20:54.16:0,54,1421	1/1:23,0:23:15.04:250,15,0	1/1:27,0:27:45.60:1408,46,0	1/1:2,17:23:6.02:142,6,0	1/1:38,0:34:96.32:2807,96,0	1/1:28,0:29:29.98:435,30,0	1/1:23,0:22:43.13:541,43,0	./.	1/1:18,0:18:17.82:189,18,0	1/1:2,0:20:8.95:126,9,0	./.	0/0:2,0:24:2.09:0,2,9	1/1:1,0:25:6.02:129,6,0	1/1:26,0:28:25.06:230,25,0	1/1:1,0:17:3.01:89,3,0	1/1:25,0:22:62.88:1592,63,0	1/1:22,0:22:3:25,3,0	./.	1/1:18,0:18:6.22:31,6,0	1/1:25,0:25:11.90:89,12,0	0/1:7,0:29:16.66:61,0,17	./.	1/1:3,0:20:47.75:513,48,0	1/1:21,0:20:9.01:166,9,0	1/1:13,0:13:23.73:210,24,0
chr10	31802885	.	GT	G	4057.36	PASS	AB=0.696;AC=30;AF=0.536;AN=56;BaseQRankSum=0.695;DP=458;FS=1.884;HRun=11;HaplotypeScore=57.1128;InbreedingCoeff=0.8190;MQ=73.79;MQ0=1;MQRankSum=-0.799;QD=15.91;ReadPosRankSum=4.016;VQSLOD=4.3588;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,21:25:59.91:493,60,0	0/0:1,0:7:11.87:0,12,67	0/0:26,1:18:6.63:0,7,195	0/0:11,0:7:3:0,3,29	0/0:6,0:20:48.91:0,49,270	0/0:5,0:19:40.09:0,40,212	0/0:7,0:11:20.15:0,20,94	0/0:24,1:25:35.34:0,35,559	0/0:5,0:8:15.45:0,15,75	1/1:4,15:20:14.98:318,15,0	1/1:2,12:14:20.07:255,20,0	1/1:3,12:15:32.94:271,33,0	1/1:2,15:17:41.95:344,42,0	0/1:2,13:15:2.02:192,0,2	0/0:14,0:14:21.04:0,21,216	1/1:5,15:20:18.11:232,18,0	1/1:2,15:17:38.94:320,39,0	1/1:5,14:22:45.05:338,45,0	0/0:17,0:17:30.06:0,30,312	0/0:26,0:26:78.11:0,78,796	0/0:17,0:17:39.10:0,39,416	1/1:0,9:9:26.96:221,27,0	1/1:1,15:16:41.95:345,42,0	1/1:2,7:10:20:154,20,0	1/1:2,7:9:14.98:123,15,0	1/1:3,17:20:47.84:387,48,0	0/1:20,4:24:16.10:16,0,389	1/1:0,2:2:5.99:49,6,0
chr10	31803784	.	A	AT	10159.62	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-3.787;DP=518;FS=26.503;HRun=8;HaplotypeScore=81.0981;InbreedingCoeff=0.9646;MQ=61.65;MQ0=3;MQRankSum=-4.205;QD=21.66;ReadPosRankSum=1.372;VQSLOD=3.3679;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,19:23:41.92:410,42,0	1/1:3,8:11:22.74:231,23,0	0/0:17,0:12:19.77:0,20,171	0/0:31,0:19:41.98:0,42,375	1/1:3,12:15:30.08:338,30,0	1/1:3,18:22:50.97:559,51,0	1/1:2,23:25:54.07:593,54,0	1/1:5,19:24:57.14:635,57,0	1/1:3,13:16:33.06:366,33,0	1/1:3,14:18:41.89:421,42,0	1/1:3,11:14:34.21:339,34,0	1/1:4,15:19:40.39:386,40,0	1/1:2,16:18:35.86:400,36,0	1/1:2,11:13:27.08:311,27,0	1/1:4,11:15:18.05:208,18,0	1/1:3,14:17:18.05:208,18,0	1/1:4,20:24:52.88:556,53,0	1/1:8,17:25:45.13:519,45,0	1/1:3,14:18:44.13:448,44,0	1/1:15,8:25:54.94:510,55,0	1/1:4,12:16:36.09:405,36,0	1/1:1,15:16:32.97:336,33,0	1/1:4,11:15:31.29:332,31,0	1/1:2,11:13:20.94:198,21,0	1/1:3,14:17:18.05:208,18,0	1/1:3,21:24:59.48:630,59,0	1/1:4,17:21:43.34:475,43,0	1/1:0,5:5:12.04:138,12,0
chr10	31803800	.	C	CGT	2890.73	PASS	AB=0.861;AC=45;AF=0.865;AN=52;BaseQRankSum=1.247;DP=504;FS=2.687;HRun=0;HaplotypeScore=142.6143;InbreedingCoeff=0.0236;MQ=53.62;MQ0=14;MQRankSum=-1.971;QD=6.68;ReadPosRankSum=-1.117;VQSLOD=3.4628;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:21:1.49:26,1,0	1/1:8,2:10:9.01:114,9,0	./.	./.	0/1:12,3:14:15:201,0,15	0/1:16,2:18:45.57:167,0,46	0/1:23,3:26:89.59:232,0,90	1/1:27,0:26:9.34:115,9,0	0/1:16,4:19:8.98:260,0,9	1/1:16,0:17:17.97:165,18,0	1/1:15,0:15:12.01:121,12,0	1/1:15,0:16:9.01:83,9,0	1/1:16,0:16:8.87:67,9,0	1/1:12,0:12:6.01:71,6,0	0/0:11,0:13:20.44:0,20,168	1/1:16,0:16:8.99:79,9,0	1/1:28,0:29:21.48:214,21,0	1/1:22,0:22:14.91:116,15,0	1/1:14,0:13:5.91:38,6,0	1/1:10,2:11:12.04:167,12,0	1/1:13,2:14:6.02:90,6,0	1/1:20,0:19:15.01:147,15,0	1/1:19,0:19:3.01:44,3,0	1/1:17,0:17:9.44:72,9,0	1/1:9,0:9:2.71:23,3,0	1/1:24,0:24:23.76:188,24,0	0/1:13,3:16:14.52:206,0,15	1/1:3,0:2:2.96:19,3,0
chr10	31804267	.	A	AG	11158.70	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-5.546;DP=520;FS=14.643;HRun=7;HaplotypeScore=79.5992;InbreedingCoeff=0.9742;MQ=78.26;MQ0=0;MQRankSum=-5.873;QD=24.85;ReadPosRankSum=0.508;VQSLOD=3.9026;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,25:31:81.18:978,81,0	1/1:1,0:8:10.65:49,11,0	0/0:19,0:18:23.89:0,24,324	0/0:27,0:23:27.94:0,28,288	1/1:12,0:18:28.76:167,29,0	1/1:11,0:21:54.78:301,55,0	1/1:8,0:20:43.35:238,43,0	1/1:3,14:18:39.02:420,39,0	1/1:7,0:11:23.31:138,23,0	1/1:2,12:14:36.11:434,36,0	1/1:5,8:13:24.07:290,24,0	1/1:5,22:27:60.14:708,60,0	1/1:1,6:7:21.06:253,21,0	1/1:0,17:17:33.03:380,33,0	0/0:25,0:25:23.36:0,23,187	1/1:9,13:22:43.48:548,43,0	1/1:2,32:34:84.26:1014,84,0	1/1:5,10:15:36.07:409,36,0	1/1:2,13:15:39.12:471,39,0	1/1:4,17:22:54.14:630,54,0	1/1:5,18:23:57.11:670,57,0	1/1:2,21:23:31.21:659,31,0	1/1:5,13:18:39.12:471,39,0	1/1:3,13:16:39.03:441,39,0	1/1:5,7:12:33.05:355,33,0	1/1:3,15:17:39.11:460,39,0	1/1:4,16:20:41.81:494,42,0	1/1:0,5:5:15.05:181,15,0
chr10	31804347	.	A	AAGAG	17181.78	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-4.273;DP=619;FS=8.646;HRun=0;HaplotypeScore=192.0415;InbreedingCoeff=0.6286;MQ=57.25;MQ0=17;MQRankSum=-2.334;QD=37.68;ReadPosRankSum=4.430;VQSLOD=4.4335;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:26,17:40:57.72:1648,58,0	1/1:3,0:3:3.01:37,3,0	0/0:71,0:35:32.54:0,33,730	0/0:92,0:42:41.48:0,41,534	1/1:6,4:9:23.87:327,24,0	1/1:11,7:19:36.11:759,36,0	1/1:8,2:8:9.03:205,9,0	1/1:16,4:21:33.07:738,33,0	1/1:5,3:8:20.99:347,21,0	1/1:12,4:16:26.29:656,26,0	1/1:12,6:18:32.48:554,32,0	1/1:12,12:24:8.48:954,8,0	1/1:3,8:10:19.25:598,19,0	1/1:11,7:19:23.87:915,24,0	1/1:10,7:17:12.83:872,13,0	1/1:19,8:26:43.56:928,44,0	1/1:13,5:17:1.59:391,2,0	1/1:4,5:8:11.85:432,12,0	1/1:9,3:16:26.88:557,27,0	1/1:11,10:21:20.61:828,21,0	1/1:16,7:20:7.54:417,8,0	1/1:8,12:21:41.93:895,42,0	1/1:9,8:17:36.11:736,36,0	1/1:12,10:19:5.01:526,5,0	1/1:8,11:19:39.61:987,40,0	1/1:13,10:23:67.70:1300,68,0	1/1:9,7:15:2.70:439,3,0	1/1:4,0:4:8.90:136,9,0
chr10	31804359	.	A	AGG	2777.80	PASS	AB=0.979;AC=22;AF=0.393;AN=56;BaseQRankSum=11.496;DP=651;FS=2.488;HRun=0;HaplotypeScore=258.9354;InbreedingCoeff=-0.5415;MQ=45.70;MQ0=13;MQRankSum=-6.666;QD=6.69;ReadPosRankSum=-2.448;VQSLOD=2.5502;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:48,2:46:99:339,0,503	1/1:4,0:4:0.89:2,1,0	0/0:69,0:30:43.68:0,44,850	0/0:84,0:32:58.49:0,58,720	0/0:10,0:9:20.61:0,21,138	0/0:16,0:15:37.15:0,37,239	0/1:9,0:7:30.97:43,0,31	0/1:23,0:19:53.68:54,0,324	0/1:9,0:9:59.82:69,0,60	0/1:18,1:19:99:129,0,337	0/1:21,1:21:21.76:22,0,200	0/1:23,3:26:99:400,0,168	0/1:16,0:15:85.40:85,0,239	0/1:18,0:18:99:156,0,215	0/1:23,0:23:99:331,0,166	0/1:27,0:26:99:218,0,354	0/1:21,0:20:99:285,0,122	0/0:9,0:7:17.85:0,18,134	0/1:15,0:15:99:168,0,267	0/1:22,1:22:58.31:58,0,227	0/1:18,2:16:9.52:10,0,143	0/0:22,1:23:16.64:0,17,304	0/1:19,0:19:99:153,0,179	0/0:23,0:20:25.23:0,25,184	0/1:21,1:21:99:148,0,223	0/1:30,0:29:99:178,0,540	0/1:14,0:13:67.02:67,0,121	0/1:5,0:5:20.95:21,0,30
chr10	31804411	.	G	GGA	19419.60	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=2.918;DP=590;FS=59.186;HRun=0;HaplotypeScore=148.1530;InbreedingCoeff=0.9852;MQ=55.04;MQ0=7;MQRankSum=-3.585;QD=39.00;ReadPosRankSum=4.385;VQSLOD=1.5977;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,36:41:98.34:1624,98,0	1/1:3,5:8:18.06:310,18,0	0/0:41,0:21:51.17:0,51,673	0/0:49,0:25:44.97:0,45,684	1/1:3,11:14:33.11:569,33,0	1/1:3,7:9:18.06:312,18,0	1/1:1,18:18:42.14:723,42,0	1/1:6,32:37:96.28:1556,96,0	1/1:2,11:13:33.11:571,33,0	1/1:6,9:15:35.27:527,35,0	1/1:6,12:17:41.73:680,42,0	1/1:5,19:24:60.19:1001,60,0	1/1:2,10:11:25.49:464,25,0	1/1:5,8:13:33.10:541,33,0	1/1:4,10:14:30.10:518,30,0	1/1:3,16:18:47.56:753,48,0	1/1:5,20:25:66.23:1136,66,0	1/1:2,7:8:19.62:316,20,0	1/1:7,16:23:60.19:964,60,0	1/1:5,23:28:66.16:1141,66,0	1/1:3,28:32:69.23:1175,69,0	1/1:3,16:19:45.15:778,45,0	1/1:5,15:20:42.14:725,42,0	1/1:4,19:21:48.16:787,48,0	1/1:1,15:17:45.09:740,45,0	1/1:3,11:14:36.04:587,36,0	1/1:6,8:14:38.34:558,38,0	1/1:1,8:9:21.07:363,21,0
chr10	31805919	.	C	CT	8458.72	PASS	AB=0.626;AC=33;AF=0.589;AN=56;BaseQRankSum=-11.247;DP=686;FS=0.000;HRun=11;HaplotypeScore=81.8225;InbreedingCoeff=0.2016;MQ=67.90;MQ0=0;MQRankSum=0.987;QD=15.46;ReadPosRankSum=0.870;VQSLOD=5.3653;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,37:45:57.90:759,58,0	0/0:12,0:12:26.86:0,27,205	0/0:22,0:19:12.63:0,13,121	0/0:23,0:18:26.89:0,27,164	0/0:31,1:33:29.91:0,30,554	0/0:22,1:23:29.33:0,29,411	0/0:23,0:23:56.75:0,57,441	0/1:18,22:40:37.96:532,0,38	0/1:10,3:13:25.01:25,0,196	0/1:12,22:35:18.70:563,0,19	0/1:8,11:19:7.30:296,0,7	0/1:7,23:30:5.43:485,0,5	1/1:3,15:20:38.24:420,38,0	0/1:4,16:20:1.39:351,0,1	1/1:4,1:25:48.54:261,49,0	0/1:11,21:32:12.44:430,0,12	0/1:10,15:25:24.15:320,0,24	1/1:1,5:6:9.02:91,9,0	0/1:11,14:27:19.56:384,0,20	0/1:10,24:34:32.94:561,0,33	1/1:4,25:31:31.37:652,31,0	1/1:7,17:25:3.70:402,4,0	0/1:8,14:23:27.79:277,0,28	1/1:5,21:26:7.61:429,8,0	1/1:3,12:15:21.04:213,21,0	1/1:4,20:24:30.84:485,31,0	1/1:5,15:24:17.47:338,17,0	1/1:2,6:8:18.04:182,18,0
chr10	31807860	.	TTTC	T	722.53	PASS	AB=0.982;AC=20;AF=0.357;AN=56;BaseQRankSum=1.471;DP=382;FS=10.835;HRun=0;HaplotypeScore=96.3522;InbreedingCoeff=0.1781;MQ=64.16;MQ0=28;MQRankSum=-2.958;QD=5.39;ReadPosRankSum=3.589;VQSLOD=1.4725;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:8:11.53:0,12,89	0/0:6,0:6:18.02:0,18,254	0/0:46,0:12:15.11:0,15,225	0/0:83,1:20:30.89:0,31,433	0/0:13,0:12:35.56:0,36,448	0/0:11,0:10:28.06:0,28,330	0/0:6,0:6:11.53:0,12,208	0/0:18,0:18:13.86:0,14,117	0/0:8,0:8:21.07:0,21,361	0/1:5,0:5:3.37:3,0,40	0/1:12,0:12:19.89:20,0,122	1/1:5,0:5:4.19:19,4,0	0/1:9,0:9:12.85:23,0,13	0/1:10,0:10:23.17:23,0,30	0/0:18,0:18:38.05:0,38,601	1/1:9,0:9:9.51:36,10,0	0/0:11,0:10:2.46:0,2,108	0/0:8,0:8:14.79:0,15,124	0/1:7,2:8:50.05:58,0,50	1/1:6,6:12:2.54:105,3,0	0/1:9,0:9:2.30:129,0,2	0/1:5,0:5:18.75:19,0,30	0/1:6,0:6:13.54:14,0,16	0/0:8,0:8:13.58:0,14,81	1/1:11,0:11:13.10:47,13,0	0/1:7,0:7:38.32:38,0,62	1/1:6,12:18:39.80:353,40,0	0/1:7,0:7:10.82:11,0,47
chr10	31807888	.	CCTTTT	C	2312.63	PASS	AB=0.883;AC=30;AF=0.536;AN=56;BaseQRankSum=-0.084;DP=364;FS=24.014;HRun=0;HaplotypeScore=82.1775;InbreedingCoeff=0.6267;MQ=53.23;MQ0=29;MQRankSum=-2.979;QD=19.94;ReadPosRankSum=3.998;VQSLOD=1.5202;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,5:6:3.01:38,3,0	0/0:5,0:5:12.02:0,12,211	0/0:61,0:18:24.46:0,24,241	0/0:84,0:14:16.99:0,17,95	0/0:10,0:9:21.01:0,21,252	0/0:12,0:10:29.39:0,29,489	0/0:7,0:7:15:0,15,227	0/0:22,0:22:54.06:0,54,848	0/0:9,0:9:23.07:0,23,459	1/1:1,4:5:12.04:204,12,0	1/1:2,8:10:17.99:312,18,0	1/1:0,5:5:6.02:122,6,0	1/1:0,8:8:9.03:182,9,0	0/1:1,7:8:25.69:170,0,26	0/0:16,0:16:45.12:0,45,1186	1/1:4,2:6:15.04:253,15,0	1/1:1,6:7:5.93:78,6,0	1/1:3,0:3:3.01:30,3,0	0/0:12,0:10:24.18:0,24,420	0/1:8,0:8:17.21:17,0,59	0/0:8,0:8:17.65:0,18,173	1/1:0,5:5:15:237,15,0	1/1:0,5:5:6.02:121,6,0	0/1:6,0:6:5.02:145,0,5	1/1:0,8:8:9.03:182,9,0	1/1:2,4:6:12.04:243,12,0	0/1:14,0:14:0.74:1,0,26	1/1:1,5:6:9.03:182,9,0
chr10	31808267	.	TG	T	2904.43	PASS	AC=10;AF=0.185;AN=54;BaseQRankSum=12.609;DP=588;FS=2.035;HRun=2;HaplotypeScore=69.3871;InbreedingCoeff=0.9889;MQ=92.62;MQ0=0;MQRankSum=-3.620;QD=33.77;ReadPosRankSum=0.768;VQSLOD=3.7921;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,144,2117	1/1:0,4:4:12.04:155,12,0	0/0:24,0:24:66.01:0,66,924	0/0:26,0:26:71.87:0,72,983	1/1:2,14:16:36.12:467,36,0	1/1:0,23:23:69.22:896,69,0	1/1:1,23:24:66.21:857,66,0	0/0:26,0:26:75.24:0,75,1090	1/1:0,19:19:54.18:701,54,0	0/0:13,0:13:36.12:0,36,540	0/0:8,0:8:24.08:0,24,359	0/0:15,0:15:45.15:0,45,673	0/0:17,0:17:51.17:0,51,762	0/0:21,0:21:63.17:0,63,874	0/0:24,0:24:72.23:0,72,1058	0/0:31,0:31:93.31:0,93,1388	0/0:41,0:41:99:0,120,1795	0/0:19,0:19:51.17:0,51,764	0/0:22,0:22:66.21:0,66,967	0/0:6,0:6:18.06:0,18,269	0/0:44,0:44:99:0,132,1976	0/0:9,0:9:24.08:0,24,355	0/0:9,0:9:21.07:0,21,314	0/0:25,0:25:75.24:0,75,1104	0/0:18,0:18:54.16:0,54,787	0/0:22,0:22:63.21:0,63,931	0/0:33,0:32:96.28:0,96,1413	./.
chr10	31808553	.	GAC	G	251.82	PASS	AB=0.954;AC=27;AF=0.540;AN=50;BaseQRankSum=5.958;DP=541;FS=0.000;HRun=0;HaplotypeScore=73.1476;InbreedingCoeff=0.2013;MQ=61.27;MQ0=15;MQRankSum=-0.437;QD=0.75;ReadPosRankSum=-0.924;VQSLOD=0.8224;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:30:7.89:8,0,56	1/1:14,0:14:0.47:1,0,0	./.	./.	1/1:17,0:22:2.84:14,3,0	./.	1/1:17,0:19:8.34:49,8,0	0/0:21,0:19:0:0,0,0	1/1:14,0:18:2.84:14,3,0	0/1:23,0:23:10.53:11,0,96	0/0:15,0:15:10.95:0,11,152	0/1:24,3:27:19.88:20,0,57	1/1:11,0:11:3.46:24,3,0	1/1:8,1:9:5.85:46,6,0	1/1:13,0:22:7.24:32,7,0	0/1:18,0:18:0.42:0,0,187	0/0:28,0:26:29.92:0,30,325	0/0:17,0:16:12.01:0,12,152	0/0:11,0:11:2.99:0,3,24	1/1:13,3:17:3:32,3,0	1/1:16,8:22:0.82:39,1,0	0/0:18,0:17:12.02:0,12,154	0/0:19,1:20:12.01:0,12,130	0/1:20,1:22:17.14:17,0,224	0/1:12,1:13:19.76:20,0,119	0/1:25,2:27:16.33:16,0,103	1/1:11,2:15:8.69:60,9,0	0/0:7,0:7:9:0,9,110
chr10	31810053	.	C	CTGAA	4209.90	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=11.019;DP=482;FS=49.754;HRun=0;HaplotypeScore=84.6784;InbreedingCoeff=0.9982;MQ=70.05;MQ0=0;MQRankSum=-11.888;QD=63.79;ReadPosRankSum=-3.211;VQSLOD=1.5586;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:78.27:0,78,1446	1/1:3,11:14:39.13:982,39,0	0/0:18,0:16:42.14:0,42,748	0/0:16,0:15:45.15:0,45,791	1/1:3,19:22:57.19:1360,57,0	1/1:0,9:9:27.09:718,27,0	1/1:2,9:8:21.07:558,21,0	0/0:27,0:27:72.19:0,72,1278	1/1:3,6:10:27.09:593,27,0	0/0:15,0:15:39.13:0,39,728	0/0:16,0:16:45.15:0,45,840	0/0:16,0:16:45.15:0,45,826	0/0:14,0:14:42.14:0,42,774	0/0:14,0:14:36.12:0,36,672	0/0:17,0:17:51.17:0,51,952	0/0:16,0:16:36.12:0,36,672	0/0:23,0:23:69.24:0,69,1288	0/0:23,0:23:69.24:0,69,1288	0/0:23,0:22:60.16:0,60,1026	0/0:15,0:14:45.15:0,45,840	0/0:23,0:23:66.20:0,66,1198	0/0:11,0:11:30.10:0,30,559	0/0:18,0:18:51.65:0,52,943	0/0:21,0:21:54.19:0,54,1008	0/0:19,0:19:54.17:0,54,978	0/0:12,0:12:33.11:0,33,616	0/0:22,0:22:57.16:0,57,1000	0/0:10,0:10:30.10:0,30,559
chr10	31810149	.	G	GTATA	1483.55	PASS	AB=1.000;AC=28;AF=0.636;AN=44;BaseQRankSum=-1.592;DP=178;FS=6.991;HRun=0;HaplotypeScore=44.0201;InbreedingCoeff=0.4399;MQ=89.20;MQ0=3;MQRankSum=-2.156;QD=14.26;ReadPosRankSum=3.599;VQSLOD=1.2837;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,0:9:3.01:48,3,0	./.	0/0:16,0:12:12.45:0,12,118	0/1:13,0:8:0:0,0,0	./.	1/1:1,0:1:3.01:37,3,0	1/1:4,0:4:3.01:48,3,0	0/0:22,0:21:7.96:0,8,130	./.	1/1:4,0:6:6.02:115,6,0	1/1:4,0:4:5.89:64,6,0	./.	1/1:3,0:6:3.01:46,3,0	1/1:2,0:2:3.01:36,3,0	0/0:2,0:2:6.02:0,6,94	1/1:5,0:5:6.02:85,6,0	1/1:9,1:9:27.09:427,27,0	1/1:14,0:13:27.09:414,27,0	0/0:4,0:4:3.01:0,3,47	0/0:6,0:6:8.97:0,9,119	0/0:2,0:2:2.04:0,2,6	./.	./.	1/1:3,0:3:3.01:48,3,0	0/0:4,0:4:1.40:0,1,8	1/1:5,0:5:6.49:107,6,0	0/1:15,0:14:14.11:14,0,51	1/1:1,5:6:6.02:133,6,0
chr10	31810178	.	GAGA	G	1097.61	PASS	AB=0.980;AC=28;AF=0.500;AN=56;BaseQRankSum=-5.583;DP=186;FS=9.110;HRun=0;HaplotypeScore=43.7604;InbreedingCoeff=0.2457;MQ=65.45;MQ0=8;MQRankSum=-0.913;QD=9.38;ReadPosRankSum=0.141;VQSLOD=1.2760;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:6,0:8:9.68:36,0,10	0/1:2,0:2:0:0,0,0	0/0:26,0:10:23.73:0,24,345	0/0:21,0:11:22.99:0,23,222	0/1:3,0:3:0:0,0,0	0/1:2,0:2:0:0,0,0	1/1:2,0:2:3.01:40,3,0	1/1:15,2:16:8.99:441,9,0	0/1:2,0:2:0:0,0,0	0/1:4,0:4:14.41:14,0,46	0/0:3,0:3:5.93:0,6,40	1/1:2,0:1:2.97:20,3,0	0/0:3,0:3:2.89:0,3,27	0/0:2,0:2:2.40:0,2,24	0/0:3,0:3:2.41:0,2,49	1/1:5,0:5:4.80:24,5,0	0/1:17,0:15:36.77:37,0,82	0/1:13,0:11:99:133,0,111	1/1:1,5:6:14.91:139,15,0	0/1:5,0:4:1.91:3,0,2	1/1:2,0:2:3.01:55,3,0	1/1:2,0:2:3.01:33,3,0	1/1:2,0:2:2.97:20,3,0	0/0:2,0:2:3.47:0,3,27	0/0:7,0:6:9.30:0,9,107	0/0:2,0:2:4.48:0,4,21	1/1:16,0:13:26.09:245,26,0	0/1:7,0:6:8.02:8,0,50
chr10	31810180	.	GA	G	1099.01	PASS	AB=0.920;AC=31;AF=0.574;AN=54;BaseQRankSum=-5.242;DP=190;FS=9.167;HRun=1;HaplotypeScore=40.9040;InbreedingCoeff=0.2720;MQ=68.51;MQ0=8;MQRankSum=-1.579;QD=8.79;ReadPosRankSum=0.440;VQSLOD=0.2508;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,0:9:9.42:69,9,0	0/1:2,0:2:0:0,0,0	0/0:24,0:10:17.56:0,18,235	0/0:23,0:12:20.23:0,20,201	0/1:5,0:5:0:0,0,0	0/1:2,0:2:0:0,0,0	1/1:2,0:2:2.98:22,3,0	1/1:10,10:19:28.19:319,28,0	0/1:2,0:2:0:0,0,0	0/1:3,0:3:1.12:19,0,1	./.	1/1:2,0:1:2.97:20,3,0	0/0:3,0:3:0.36:0,0,1	0/1:3,0:3:7.37:20,0,7	0/0:3,0:3:2.40:0,2,24	1/1:5,0:5:4.80:24,5,0	0/1:6,10:14:35.46:108,0,35	0/1:7,7:12:65.56:79,0,66	1/1:6,0:6:14.86:113,15,0	1/1:1,4:4:5.68:44,6,0	1/1:1,1:2:3.01:33,3,0	1/1:0,2:2:3.01:33,3,0	1/1:2,0:2:2.97:20,3,0	0/0:2,0:2:3.41:0,3,19	0/0:7,0:6:7.75:0,8,47	0/0:2,0:2:1.24:0,1,3	1/1:4,13:14:26.99:294,27,0	0/1:6,0:5:18.67:27,0,19
chr10	31810187	.	G	GA	110.49	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=1.211;DP=218;FS=75.823;HRun=0;HaplotypeScore=52.1815;InbreedingCoeff=0.5199;MQ=76.45;MQ0=4;MQRankSum=-1.432;QD=3.56;ReadPosRankSum=1.482;VQSLOD=0.0543;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:8.67:0,9,64	1/1:0,2:2:5.90:37,6,0	0/0:27,0:11:22.70:0,23,282	0/0:29,0:17:27.76:0,28,240	1/1:0,5:5:8.83:54,9,0	1/1:0,2:2:5.88:36,6,0	1/1:1,2:3:8.95:82,9,0	0/0:28,0:28:39.68:0,40,467	1/1:0,2:2:5.86:35,6,0	0/0:3,0:3:7.52:0,8,57	0/0:5,0:5:9.88:0,10,78	0/0:3,0:2:2.98:0,3,21	0/0:2,0:2:2.99:0,3,24	0/0:4,0:4:6.68:0,7,41	0/0:2,0:2:3:0,3,26	0/0:5,0:5:8.92:0,9,68	0/1:15,0:13:9.52:10,0,36	0/0:10,0:8:16.12:0,16,113	0/0:9,0:9:1.59:0,2,52	0/0:9,0:8:9.65:0,10,101	0/0:2,0:2:5.88:0,6,42	1/1:2,0:2:2.04:6,2,0	0/0:5,0:5:0:0,0,0	0/0:1,0:1:2.97:0,3,20	0/0:9,0:9:17.86:0,18,163	0/0:3,0:3:9.01:0,9,86	0/0:15,0:14:12.03:0,12,117	0/0:6,0:6:14.98:0,15,149
chr10	31810917	.	G	GGC	2950.42	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=10.892;DP=508;FS=1.131;HRun=0;HaplotypeScore=70.0012;InbreedingCoeff=0.9843;MQ=63.41;MQ0=2;MQRankSum=-4.830;QD=40.42;ReadPosRankSum=1.773;VQSLOD=5.2847;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:78.26:0,78,1241	1/1:0,4:3:9.03:182,9,0	0/0:20,0:19:54.17:0,54,840	0/0:18,0:17:45.11:0,45,681	1/1:1,14:15:20.75:419,21,0	1/1:1,14:16:33.11:645,33,0	1/1:3,17:20:51.13:969,51,0	0/0:22,0:22:66.22:0,66,1055	1/1:0,17:18:45.15:906,45,0	0/0:15,0:15:45.15:0,45,710	0/0:19,0:19:57.18:0,57,895	0/0:19,0:19:57.16:0,57,871	0/0:12,0:12:33.09:0,33,490	0/0:26,0:26:78.27:0,78,1266	0/0:20,0:20:60.20:0,60,971	0/0:19,0:19:57.19:0,57,929	0/0:25,0:25:75.19:0,75,1146	0/0:18,0:18:54.11:0,54,824	0/0:20,0:20:60.20:0,60,951	0/0:15,0:15:45.08:0,45,679	0/0:31,0:30:81.19:0,81,1253	0/0:10,0:10:30.10:0,30,487	0/0:8,0:8:24.08:0,24,391	0/0:22,0:22:63.20:0,63,1004	0/0:10,0:10:27.09:0,27,440	0/0:21,0:21:60.18:0,60,930	0/0:20,0:20:57.18:0,57,897	0/0:16,0:16:45.15:0,45,725
chr10	31811087	.	C	CT	3908.81	PASS	AB=0.961;AC=22;AF=0.393;AN=56;BaseQRankSum=-3.351;DP=497;FS=10.125;HRun=8;HaplotypeScore=130.3969;InbreedingCoeff=0.6713;MQ=58.68;MQ0=14;MQRankSum=4.607;QD=20.46;ReadPosRankSum=-4.897;VQSLOD=1.2551;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:14:32:0,32,269	1/1:0,9:9:27.08:312,27,0	0/0:57,0:21:16.09:0,16,171	0/0:55,1:15:7.83:0,8,191	1/1:3,28:31:84.16:938,84,0	1/1:3,20:23:60.18:692,60,0	1/1:0,7:7:18.05:208,18,0	1/1:7,8:15:36.11:415,36,0	1/1:1,13:14:33.10:381,33,0	0/0:28,0:28:38.04:0,38,453	0/0:12,0:11:3.22:0,3,159	0/0:14,0:14:21.81:0,22,234	0/1:7,0:7:11.95:12,0,56	0/1:12,0:12:11.88:12,0,89	0/0:23,0:22:63.03:0,63,577	0/0:15,0:15:24.74:0,25,164	0/0:14,0:14:8.78:0,9,221	0/0:14,0:14:18.52:0,19,249	0/1:13,3:15:7.19:230,0,7	1/1:11,4:15:26.15:300,26,0	1/1:4,1:5:8.86:79,9,0	0/0:3,0:3:9.01:0,9,86	0/0:17,0:17:22.93:0,23,269	0/0:8,0:8:18.02:0,18,170	0/0:16,0:16:43.49:0,43,351	0/1:19,0:19:6.14:6,0,283	1/1:13,4:17:40.69:326,41,0	0/0:12,0:12:29.39:0,29,255
chr10	31811091	.	TTTTTCTTTTCTTTTC	T	15631.25	PASS	AB=0.889;AC=39;AF=0.696;AN=56;BaseQRankSum=-1.196;DP=520;FS=11.732;HRun=0;HaplotypeScore=230.4572;InbreedingCoeff=0.8965;MQ=57.24;MQ0=14;MQRankSum=-10.476;QD=51.93;ReadPosRankSum=-0.223;VQSLOD=2.7194;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,3:15:30.10:730,30,0	0/0:10,0:10:27.08:0,27,1017	0/0:55,0:22:12.31:0,12,262	0/0:55,0:15:19.99:0,20,399	0/0:31,0:31:66.23:0,66,2812	0/0:22,0:22:54.19:0,54,2452	0/0:8,0:8:21.07:0,21,682	1/1:17,0:16:12.59:104,13,0	0/0:14,0:14:30.10:0,30,1469	1/1:21,5:28:44.49:1403,44,0	1/1:9,3:14:30.10:898,30,0	1/1:14,3:18:37.37:1126,37,0	1/1:6,2:10:27.09:784,27,0	1/1:5,4:12:30.10:1112,30,0	0/0:23,0:22:66.22:0,66,3320	1/1:8,8:17:45.15:1524,45,0	0/1:13,2:16:6.84:724,0,7	1/1:13,1:15:24.08:744,24,0	1/1:22,0:20:32.41:677,32,0	1/1:12,0:13:30.05:696,30,0	1/1:4,0:5:12:205,12,0	1/1:5,0:5:12.04:280,12,0	1/1:16,3:20:39.13:1129,39,0	1/1:8,0:8:15.03:239,15,0	1/1:13,3:16:36.12:912,36,0	1/1:14,2:20:48.16:1461,48,0	1/1:10,0:16:30.05:650,30,0	1/1:9,1:10:9.03:233,9,0
chr10	31811092	.	TTTTCTTTTCTTTTC	T	13429.94	PASS	AB=1.000;AC=30;AF=0.536;AN=56;BaseQRankSum=3.816;DP=520;FS=1.639;HRun=0;HaplotypeScore=226.9758;InbreedingCoeff=-0.2628;MQ=56.17;MQ0=14;MQRankSum=-10.667;QD=35.44;ReadPosRankSum=0.854;VQSLOD=4.0258;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:18,0:15:21.51:422,0,22	0/1:11,0:11:9.99:10,0,781	0/0:53,0:20:13.10:0,13,385	0/0:56,0:15:6.02:0,6,524	0/1:32,0:32:99:166,0,2147	0/1:23,0:23:6.60:7,0,1914	0/0:9,0:9:24.06:0,24,570	1/1:15,0:14:42.13:588,42,0	0/1:14,0:14:1.43:1,0,1153	0/1:27,0:27:99:923,0,203	0/1:15,0:14:44.06:595,0,44	0/1:18,0:18:58.67:724,0,59	1/1:10,0:10:1.67:515,2,0	0/1:12,0:12:18.82:809,0,19	0/0:23,0:22:69.23:0,69,3241	0/1:17,0:17:3.77:1064,0,4	0/1:16,0:16:39.83:447,0,40	0/1:15,0:15:99:484,0,123	1/1:16,6:20:57.18:1284,57,0	1/1:8,6:14:42.11:1187,42,0	1/1:3,1:4:12:313,12,0	0/1:5,0:5:12.42:155,0,12	0/1:20,0:20:79.52:721,0,80	0/1:8,0:8:15.80:87,0,16	0/1:16,0:16:60.30:537,0,60	0/1:20,0:20:26.16:1024,0,26	1/1:15,2:17:48.16:1247,48,0	0/1:10,0:10:99:121,0,163
chr10	31811094	.	T	TTC	1305.25	PASS	AB=0.923;AC=18;AF=0.321;AN=56;BaseQRankSum=7.093;DP=534;FS=11.419;HRun=0;HaplotypeScore=172.8501;InbreedingCoeff=-0.2491;MQ=55.70;MQ0=16;MQRankSum=-8.677;QD=5.06;ReadPosRankSum=-6.881;VQSLOD=-0.2515;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:16:17.87:0,18,378	0/0:11,0:11:25.99:0,26,117	0/0:53,0:19:7.69:0,8,202	0/0:58,0:16:25.08:0,25,332	0/0:33,0:33:64.98:0,65,261	0/0:22,0:22:47.41:0,47,170	0/0:9,0:9:18.92:0,19,92	0/1:16,0:15:33.87:34,0,44	0/0:14,0:14:24.42:0,24,78	0/1:24,2:26:53.18:53,0,515	0/1:14,3:16:82.51:83,0,195	0/1:17,1:18:73.72:74,0,302	0/1:8,2:10:74.94:106,0,75	0/1:10,3:13:99:136,0,140	0/0:23,0:22:69.18:0,69,920	0/1:16,1:17:69.14:69,0,219	0/1:15,1:16:34.63:35,0,286	0/1:15,1:16:95.60:96,0,327	0/1:26,0:22:84.44:134,0,84	0/1:14,1:15:40.17:40,0,44	1/1:3,1:4:0.47:35,0,0	0/1:5,0:5:20.92:21,0,106	0/1:18,1:19:97.28:97,0,317	0/0:8,0:8:17.84:0,18,230	0/0:16,0:16:27.82:0,28,480	0/1:16,4:20:99:137,0,388	1/1:14,6:20:3.35:318,3,0	0/0:10,0:10:26.64:0,27,373
chr10	31811104	.	TTC	T	681.67	PASS	AB=0.970;AC=20;AF=0.357;AN=56;BaseQRankSum=10.901;DP=520;FS=1.280;HRun=0;HaplotypeScore=170.4035;InbreedingCoeff=-0.1752;MQ=49.74;MQ0=18;MQRankSum=-9.668;QD=2.60;ReadPosRankSum=2.523;VQSLOD=2.7731;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:18,0:15:33.55:34,0,45	0/0:11,0:11:33.08:0,33,547	0/0:55,0:13:22.38:0,22,215	0/0:62,1:20:21.33:0,21,353	0/0:31,0:31:81.10:0,81,1303	0/0:24,0:24:69.07:0,69,1085	0/0:9,0:9:27.02:0,27,435	0/1:10,1:10:0.14:0,0,137	0/0:14,0:14:39:0,39,625	0/1:19,1:20:57.88:78,0,58	0/1:15,3:17:37.33:84,0,37	1/1:15,0:15:7.63:80,8,0	1/1:12,0:12:14.78:69,15,0	0/1:13,0:13:2.36:75,0,2	0/0:24,0:23:72.25:0,72,1269	0/1:18,2:20:9.91:157,0,10	0/1:15,0:15:23.21:23,0,57	0/1:15,0:15:33.22:33,0,99	0/1:23,0:19:34.25:34,0,210	0/1:14,0:14:38.20:38,0,102	0/1:4,0:4:5.95:6,0,31	0/1:7,0:7:9.11:9,0,35	0/1:14,0:14:28.54:31,0,29	0/1:9,0:9:0.30:0,0,56	0/1:14,1:15:49.51:50,0,72	0/1:18,1:19:39.14:39,0,63	0/0:17,0:17:23.52:0,24,311	0/0:10,0:10:0.10:0,0,70
chr10	31811105	.	TC	T	4289.35	PASS	AB=0.905;AC=31;AF=0.554;AN=56;BaseQRankSum=7.272;DP=507;FS=10.082;HRun=1;HaplotypeScore=149.2362;InbreedingCoeff=0.4664;MQ=49.77;MQ0=17;MQRankSum=-11.152;QD=16.13;ReadPosRankSum=0.942;VQSLOD=4.1081;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,5:15:35.78:226,36,0	0/0:11,0:11:33.08:0,33,458	0/0:51,1:13:3.92:0,4,157	0/0:61,0:19:22.14:0,22,330	0/0:29,0:29:80.89:0,81,1096	0/0:23,0:23:69.21:0,69,958	0/0:9,0:9:27.07:0,27,374	0/1:11,0:10:43.50:43,0,46	0/0:14,0:14:39.04:0,39,510	1/1:15,5:20:1.68:303,2,0	1/1:10,8:17:18.20:375,18,0	1/1:8,7:15:43.09:400,43,0	1/1:4,8:12:35.33:398,35,0	1/1:6,7:13:12.63:329,13,0	0/0:24,0:23:72.23:0,72,1032	1/1:14,6:20:30.10:397,30,0	1/1:9,6:15:27.33:243,27,0	0/1:8,6:14:29.69:266,0,30	0/1:23,0:19:34.78:35,0,55	0/1:14,0:14:18.57:78,0,19	0/1:4,0:4:3:39,0,3	0/1:3,4:7:5.45:160,0,5	1/1:8,6:14:23.34:325,23,0	1/1:8,1:9:12.77:81,13,0	1/1:13,1:14:11.99:179,12,0	1/1:14,5:19:48.30:384,48,0	0/0:17,0:17:12.65:0,13,129	0/1:6,0:6:27.56:28,0,56
chr10	31811106	.	CT	C	4153.49	PASS	AB=0.871;AC=35;AF=0.625;AN=56;BaseQRankSum=7.137;DP=505;FS=19.061;HRun=4;HaplotypeScore=151.1739;InbreedingCoeff=0.6033;MQ=49.81;MQ0=17;MQRankSum=-10.855;QD=14.78;ReadPosRankSum=0.423;VQSLOD=2.0027;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:15,3:15:31.65:297,32,0	0/0:11,0:11:30.09:0,30,372	0/0:50,0:13:21.27:0,21,206	0/0:60,2:20:16.27:0,16,273	0/0:29,0:29:75.24:0,75,958	0/0:23,0:23:66.20:0,66,834	0/0:9,0:9:27.09:0,27,344	0/1:8,3:10:69.69:70,0,168	0/0:15,0:15:39.11:0,39,486	1/1:14,5:19:45.03:352,45,0	1/1:17,1:17:11.84:238,12,0	1/1:11,4:15:38.76:319,39,0	1/1:11,1:12:32.19:229,32,0	1/1:12,1:13:34.17:225,34,0	0/0:24,0:23:72.23:0,72,992	1/1:20,0:20:40.70:242,41,0	1/1:13,1:15:21.83:267,22,0	1/1:12,1:13:29.15:213,29,0	0/1:22,0:18:65.34:65,0,318	0/1:11,3:14:99:169,0,117	0/1:3,1:4:28.83:56,0,29	1/1:6,1:7:17.81:128,18,0	1/1:11,4:15:38.13:318,38,0	1/1:9,0:9:17.80:161,18,0	1/1:9,5:14:34.41:314,34,0	1/1:14,5:19:31.96:396,32,0	0/1:16,1:17:14.85:15,0,411	1/1:4,2:6:8.51:79,9,0
chr10	31811107	.	T	TTTC	2643.93	PASS	AB=0.945;AC=21;AF=0.375;AN=56;BaseQRankSum=-6.861;DP=501;FS=17.966;HRun=0;HaplotypeScore=170.2467;InbreedingCoeff=-0.4304;MQ=48.83;MQ0=16;MQRankSum=-3.903;QD=9.41;ReadPosRankSum=-4.460;VQSLOD=1.2909;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:16,3:16:26.64:267,0,27	0/0:10,0:10:30.09:0,30,455	0/0:49,0:13:19.50:0,19,218	0/0:60,0:19:10.55:0,11,297	0/0:30,0:30:75.15:0,75,1174	0/0:23,0:23:66.22:0,66,1027	0/0:9,0:9:27.09:0,27,416	0/1:12,0:11:69.55:70,0,208	0/0:15,0:15:39.12:0,39,589	0/1:18,0:18:99:204,0,112	0/1:16,2:17:75.11:75,0,136	0/1:15,0:15:99:181,0,145	0/1:13,0:13:0.82:1,0,159	0/1:13,0:13:22:22,0,96	0/0:24,0:23:72.24:0,72,1185	0/1:18,2:20:49.82:50,0,180	0/1:14,2:16:73.73:210,0,74	0/1:10,2:12:99:128,0,121	0/1:21,1:18:87.13:87,0,439	0/1:14,0:14:99:207,0,211	0/1:4,0:4:50.88:71,0,51	0/1:6,1:7:69.81:70,0,76	0/1:15,0:15:99:180,0,123	0/1:8,1:9:23.32:170,0,23	0/1:14,1:15:2.07:333,0,2	0/1:16,3:19:99:359,0,121	0/1:17,0:17:34.76:35,0,519	1/1:3,0:3:1.88:83,2,0
chr10	31811130	.	A	AT	9565.11	PASS	AB=0.831;AC=43;AF=0.768;AN=56;BaseQRankSum=-0.178;DP=455;FS=1.482;HRun=8;HaplotypeScore=114.6081;InbreedingCoeff=0.6857;MQ=56.68;MQ0=8;MQRankSum=-5.495;QD=26.35;ReadPosRankSum=0.516;VQSLOD=4.0248;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,17:18:39.12:450,39,0	0/0:7,0:7:21.01:0,21,192	0/1:30,0:9:16.27:16,0,93	0/1:24,1:10:12.91:13,0,57	0/0:31,0:31:90.05:0,90,824	0/0:25,0:25:66.03:0,66,603	0/0:12,0:12:30.01:0,30,275	1/1:2,17:18:51.15:587,51,0	0/0:17,0:17:48.03:0,48,439	1/1:0,15:15:45.13:519,45,0	1/1:1,21:22:61.06:689,61,0	1/1:0,12:12:36.11:415,36,0	1/1:2,13:15:45.12:507,45,0	1/1:0,12:12:36.11:415,36,0	1/1:2,24:25:75.22:862,75,0	1/1:0,20:20:60.18:692,60,0	1/1:5,15:20:47.24:541,47,0	1/1:2,9:11:2.63:284,3,0	1/1:3,16:19:48.14:554,48,0	1/1:2,16:18:48.13:543,48,0	1/1:1,2:3:6.02:69,6,0	1/1:0,7:7:21.06:242,21,0	1/1:0,14:14:41.86:462,42,0	1/1:2,4:6:11.99:120,12,0	0/1:1,8:8:0.37:250,0,0	1/1:1,16:17:48.14:548,48,0	1/1:1,20:21:60.17:682,60,0	1/1:0,3:3:9.03:104,9,0
chr10	31811389	.	GGTGT	G	6416.21	PASS	AB=0.838;AC=41;AF=0.732;AN=56;BaseQRankSum=3.399;DP=640;FS=0.000;HRun=0;HaplotypeScore=125.7684;InbreedingCoeff=0.5835;MQ=57.66;MQ0=17;MQRankSum=3.333;QD=13.34;ReadPosRankSum=2.710;VQSLOD=4.2808;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:19,16:35:3.95:375,4,0	1/1:5,5:10:8.92:142,9,0	0/0:28,0:15:5.97:0,6,60	0/0:40,0:16:3.47:0,3,27	1/1:15,15:34:23.42:486,23,0	1/1:11,6:18:17.79:265,18,0	1/1:9,8:17:8.76:142,9,0	0/0:29,0:31:29.27:0,29,316	1/1:10,8:18:12.04:190,12,0	1/1:13,9:23:15.27:369,15,0	0/1:11,3:20:6.11:199,0,6	1/1:5,12:17:14.37:236,14,0	1/1:11,16:26:36.12:569,36,0	1/1:10,10:20:18.06:285,18,0	0/0:5,0:19:33.11:0,33,576	1/1:10,14:24:36.11:548,36,0	1/1:18,18:35:36.11:549,36,0	1/1:12,10:21:4:312,4,0	0/0:21,0:20:17.61:0,18,215	0/1:19,2:21:61.86:62,0,536	0/1:28,2:28:50.22:50,0,549	1/1:4,13:18:27.06:401,27,0	1/1:5,7:13:9.03:142,9,0	1/1:11,13:22:24.08:380,24,0	1/1:8,9:18:18.05:265,18,0	1/1:12,9:21:26.76:364,27,0	0/0:20,0:20:21.04:0,21,389	1/1:8,0:7:4.77:84,5,0
chr10	31812533	.	GA	G	6014.79	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=16.495;DP=664;FS=0.709;HRun=2;HaplotypeScore=90.0693;InbreedingCoeff=0.9979;MQ=83.87;MQ0=0;MQRankSum=-0.686;QD=33.98;ReadPosRankSum=0.180;VQSLOD=4.8319;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:84.24:0,84,1232	0/0:10,0:10:23.92:0,24,338	0/0:22,0:22:66.20:0,66,945	0/0:24,0:23:55.92:0,56,741	0/0:35,0:35:93.29:0,93,1341	0/0:15,0:15:45.14:0,45,655	0/0:18,0:18:51.17:0,51,764	1/1:0,23:23:66.18:814,66,0	0/0:22,0:22:66.22:0,66,985	0/0:26,0:26:75.22:0,75,1100	0/0:18,0:18:42.14:0,42,628	0/0:36,0:36:99:0,105,1532	0/0:20,0:20:57.18:0,57,835	0/0:17,0:17:48.16:0,48,720	1/1:1,32:33:87.27:1081,87,0	0/0:23,0:23:69.21:0,69,995	0/0:35,0:35:99:0,105,1569	0/0:22,0:22:66.22:0,66,989	1/1:1,27:28:78.22:968,78,0	1/1:0,21:20:45.15:583,45,0	1/1:0,32:32:87.28:1129,87,0	0/0:12,0:12:33.10:0,33,477	0/0:24,0:24:54.18:0,54,808	0/0:23,0:23:69.18:0,69,990	0/0:20,0:20:48.16:0,48,705	0/0:29,0:29:87.26:0,87,1246	1/1:1,39:39:99:1439,114,0	0/0:8,0:7:18.04:0,18,248
chr10	31812767	.	CT	C	17370.79	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=6.602;DP=600;FS=5.811;HRun=1;HaplotypeScore=74.1354;InbreedingCoeff=0.9874;MQ=80.24;MQ0=1;MQRankSum=-6.515;QD=37.52;ReadPosRankSum=3.131;VQSLOD=5.5132;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,44:44:99:1757,126,0	0/0:7,0:7:21.07:0,21,336	0/0:16,0:16:47.06:0,47,629	0/0:19,0:19:52.90:0,53,720	0/0:28,0:28:78.25:0,78,1221	0/0:23,0:23:69.22:0,69,1070	0/0:26,0:26:78.27:0,78,1235	1/1:0,32:32:93.31:1293,93,0	0/0:18,0:18:51.16:0,51,791	1/1:0,21:20:57.18:773,57,0	1/1:0,12:12:33.11:461,33,0	1/1:0,19:19:51.17:710,51,0	1/1:0,21:21:54.18:750,54,0	1/1:0,10:10:24.08:335,24,0	1/1:0,24:24:63.21:879,63,0	1/1:0,20:18:51.17:712,51,0	1/1:0,32:32:87.29:1215,87,0	1/1:0,20:20:54.18:754,54,0	1/1:0,28:28:81.26:1114,81,0	1/1:0,16:16:48.16:666,48,0	1/1:0,32:32:78.26:1089,78,0	1/1:0,9:9:27.09:376,27,0	1/1:0,4:4:9.03:126,9,0	1/1:0,46:46:99:1676,120,0	1/1:0,10:10:24.08:335,24,0	1/1:0,28:28:81.24:1094,81,0	1/1:0,25:25:66.22:921,66,0	1/1:0,9:8:24.08:335,24,0
chr10	31813025	.	C	CGGG	4480.15	PASS	AC=36;AF=0.692;AN=52;BaseQRankSum=0.074;DP=382;FS=3.234;HRun=6;HaplotypeScore=76.5735;InbreedingCoeff=0.7450;MQ=66.76;MQ0=2;MQRankSum=-4.293;QD=20.55;ReadPosRankSum=-0.924;VQSLOD=1.1817;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,0:4:6.02:97,6,0	0/0:9,0:9:27.09:0,27,383	0/0:31,0:31:78.24:0,78,1083	0/0:14,0:14:30.08:0,30,409	0/0:26,0:26:63.19:0,63,889	0/0:16,0:16:42.14:0,42,596	0/0:28,0:28:60.17:0,60,825	1/1:2,13:13:27.04:454,27,0	0/0:16,0:16:42.13:0,42,596	1/1:8,0:15:18:216,18,0	./.	1/1:10,0:10:3:25,3,0	1/1:4,0:6:3.01:43,3,0	0/0:7,0:7:0.47:0,0,1	1/1:9,0:11:9.03:140,9,0	1/1:6,0:8:3.01:43,3,0	1/1:11,0:11:3.01:43,3,0	1/1:7,0:7:3.01:35,3,0	1/1:0,8:7:15.02:239,15,0	1/1:3,17:21:36.12:753,36,0	1/1:2,17:19:39.13:828,39,0	./.	1/1:10,0:10:14.99:188,15,0	1/1:12,0:11:4.40:28,4,0	1/1:11,0:11:9.03:111,9,0	1/1:2,0:10:18.04:244,18,0	1/1:4,14:17:45.13:906,45,0	1/1:3,0:3:6.02:87,6,0
chr10	31813441	.	TGGAG	T	12010.88	PASS	AC=40;AF=0.741;AN=54;BaseQRankSum=12.461;DP=533;FS=12.970;HRun=0;HaplotypeScore=96.9442;InbreedingCoeff=0.9521;MQ=55.81;MQ0=9;MQRankSum=-6.441;QD=36.40;ReadPosRankSum=1.984;VQSLOD=4.4557;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,35:28:60.21:1157,60,0	0/0:16,0:13:33.11:0,33,903	0/0:45,0:14:30.10:0,30,684	0/0:39,0:15:28.49:0,28,895	0/0:24,0:20:45.15:0,45,1210	0/0:25,0:25:66.23:0,66,1808	0/0:23,0:23:63.22:0,63,1725	./.	0/0:29,0:29:78.25:0,78,2039	1/1:2,19:12:24.08:464,24,0	1/1:0,6:4:11.96:191,12,0	1/1:0,25:23:60.14:1121,60,0	1/1:1,8:7:18.06:348,18,0	1/1:1,18:14:23.25:463,23,0	1/1:1,29:27:69.24:1332,69,0	1/1:1,24:24:69.24:1327,69,0	1/1:0,16:13:36.04:656,36,0	1/1:0,20:15:35.37:696,35,0	1/1:1,7:4:12.03:199,12,0	1/1:3,16:18:27.09:522,27,0	1/1:1,15:14:33.11:639,33,0	1/1:0,8:8:21.07:406,21,0	1/1:1,11:10:21.07:407,21,0	1/1:2,11:11:24.08:465,24,0	1/1:3,12:15:27.09:519,27,0	1/1:1,11:10:24.08:465,24,0	1/1:1,16:14:30.10:577,30,0	1/1:0,3:1:3.01:58,3,0
chr10	31813894	.	C	CA	685.13	PASS	AC=18;AF=0.818;AN=22;BaseQRankSum=3.433;DP=141;FS=26.287;HRun=0;HaplotypeScore=26.7256;InbreedingCoeff=0.5045;MQ=105.68;MQ0=70;MQRankSum=-5.423;QD=10.54;ReadPosRankSum=2.594;VQSLOD=1.6912;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:17,0:17:51.05:0,51,644	0/0:19,0:19:54.09:0,54,691	./.	./.	./.	./.	./.	1/1:0,6:2:6.02:96,6,0	1/1:0,4:1:3.01:48,3,0	1/1:0,6:1:3.01:48,3,0	1/1:0,6:1:3.01:48,3,0	1/1:1,2:1:3.01:48,3,0	./.	./.	1/1:1,3:2:6.02:96,6,0	./.	./.	./.	./.	1/1:2,7:3:9.03:143,9,0	1/1:1,11:6:15.04:215,15,0	./.	1/1:0,15:1:3.01:48,3,0	./.	./.	./.
chr10	31813931	.	A	AT	1016.25	PASS	AC=26;AF=0.867;AN=30;BaseQRankSum=5.576;DP=205;FS=7.033;HRun=1;HaplotypeScore=27.5770;InbreedingCoeff=0.4618;MQ=66.61;MQ0=85;MQRankSum=-6.132;QD=10.06;ReadPosRankSum=-3.271;VQSLOD=-0.1539;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	1/1:0,1:1:2.97:20,3,0	0/0:20,0:12:36.11:0,36,461	0/0:28,0:25:72.12:0,72,889	./.	1/1:1,3:2:3.01:45,3,0	./.	./.	./.	1/1:1,5:1:2.98:22,3,0	1/1:2,5:2:6.02:83,6,0	1/1:1,9:5:9.03:135,9,0	1/1:2,10:4:9.03:134,9,0	./.	1/1:0,4:3:9.03:134,9,0	1/1:3,8:3:3.01:45,3,0	1/1:0,6:4:12.04:180,12,0	./.	./.	./.	1/1:0,1:1:3.01:45,3,0	1/1:0,13:4:12:150,12,0	1/1:2,11:5:6.02:90,6,0	./.	1/1:3,8:1:3.01:45,3,0	./.	./.	./.
chr10	31814478	.	CT	C	12335.63	PASS	AB=0.632;AC=39;AF=0.696;AN=56;BaseQRankSum=7.312;DP=734;FS=147.963;HRun=1;HaplotypeScore=134.0746;InbreedingCoeff=-0.1681;MQ=42.76;MQ0=100;MQRankSum=3.979;QD=17.57;ReadPosRankSum=1.212;VQSLOD=0.7014;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:23,22:33:99:554,0,174	1/1:0,10:10:21.07:265,21,0	0/0:8,0:1:3.01:0,3,48	0/0:24,0:2:5.99:0,6,54	1/1:0,17:17:26.86:349,27,0	1/1:0,10:10:21.07:272,21,0	1/1:3,21:19:36.11:449,36,0	1/1:10,15:4:12.04:156,12,0	1/1:1,26:21:51.16:650,51,0	0/1:9,20:28:99:658,0,296	0/1:3,7:9:80.50:101,0,81	0/1:20,33:49:99:937,0,321	0/1:19,21:37:99:505,0,445	0/1:23,22:39:99:638,0,390	1/1:0,31:29:57.18:729,57,0	0/1:14,23:34:99:617,0,258	0/1:21,14:26:90.53:494,0,91	1/1:10,21:29:48.16:623,48,0	1/1:1,17:12:36.12:463,36,0	1/1:0,9:8:21.07:273,21,0	1/1:2,55:45:68.92:895,69,0	1/1:4,12:14:30.10:389,30,0	0/1:5,7:12:29.87:175,0,30	0/1:22,18:35:99:419,0,143	0/1:6,17:22:98.26:422,0,98	0/1:12,20:29:99:672,0,344	1/1:0,12:12:33.11:422,33,0	0/1:4,10:12:71.69:209,0,72
chr10	31814819	.	TA	T	7353.91	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=4.516;DP=480;FS=8.114;HRun=3;HaplotypeScore=94.4710;InbreedingCoeff=0.9951;MQ=74.42;MQ0=1;MQRankSum=-7.817;QD=31.84;ReadPosRankSum=0.441;VQSLOD=4.4230;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,17:20:57.09:669,57,0	0/0:7,0:7:21.03:0,21,276	0/0:16,0:16:36.22:0,36,603	0/0:8,0:7:18.03:0,18,235	0/0:20,0:20:54.14:0,54,747	0/0:24,0:24:69.15:0,69,942	0/0:9,0:9:21.07:0,21,300	0/0:37,0:37:99:0,111,1537	0/0:20,0:20:51.17:0,51,729	1/1:4,17:21:63.15:735,63,0	1/1:3,10:13:33:362,33,0	1/1:3,13:16:45.06:510,45,0	1/1:1,9:10:27.08:332,27,0	1/1:6,12:18:45.08:524,45,0	0/0:24,0:24:66.14:0,66,901	1/1:2,19:21:60.18:729,60,0	1/1:6,11:17:44.87:477,45,0	1/1:1,11:12:33.10:408,33,0	0/0:18,0:18:54.17:0,54,757	0/0:25,0:24:72.17:0,72,1004	0/0:13,0:13:36.12:0,36,515	1/1:4,5:9:14.98:166,15,0	1/1:3,10:13:38.84:443,39,0	1/1:0,12:12:33.04:388,33,0	1/1:0,16:16:48.11:575,48,0	1/1:2,19:21:59.92:716,60,0	0/0:28,0:28:78.26:0,78,1115	1/1:4,8:12:27.07:320,27,0
chr10	31814853	.	C	CA	9464.61	PASS	AB=1.000;AC=53;AF=0.946;AN=56;BaseQRankSum=-0.615;DP=490;FS=7.321;HRun=8;HaplotypeScore=83.8813;InbreedingCoeff=0.6796;MQ=72.37;MQ0=1;MQRankSum=-6.023;QD=19.97;ReadPosRankSum=2.919;VQSLOD=4.7241;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,16:18:39.08:436,39,0	1/1:1,0:10:22.73:115,23,0	0/0:16,0:16:32.85:0,33,289	0/1:5,0:5:7.29:7,0,70	1/1:2,3:25:57.65:350,58,0	1/1:2,1:30:74.15:401,74,0	1/1:3,0:16:25.57:130,26,0	1/1:9,0:43:97.17:524,97,0	1/1:2,2:17:34.43:214,34,0	1/1:3,21:24:63.19:727,63,0	1/1:1,14:16:11.48:367,11,0	1/1:4,12:16:36.09:405,36,0	1/1:1,10:12:29.92:326,30,0	1/1:2,16:18:39.10:441,39,0	1/1:0,22:22:60.18:692,60,0	1/1:3,15:18:42.12:484,42,0	1/1:4,19:23:60.18:692,60,0	1/1:3,11:14:27.08:311,27,0	1/1:2,3:14:28.61:165,29,0	1/1:6,0:23:45.99:259,46,0	1/1:1,1:12:25.73:150,26,0	1/1:2,8:10:27.05:294,27,0	1/1:2,9:11:24.07:277,24,0	1/1:3,8:11:21.06:242,21,0	1/1:2,12:14:36.11:415,36,0	1/1:2,16:18:48.14:554,48,0	1/1:1,1:28:68.18:346,68,0	1/1:0,5:5:12.04:138,12,0
chr10	31815000	.	TAGATAGTTGGTAGATAG	T	4429.60	PASS	AB=0.828;AC=16;AF=0.286;AN=56;BaseQRankSum=7.683;DP=444;FS=14.721;HRun=0;HaplotypeScore=203.4395;InbreedingCoeff=-0.2080;MQ=46.32;MQ0=49;MQRankSum=-5.547;QD=20.04;ReadPosRankSum=-1.582;VQSLOD=2.7409;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:11:0.47:1,0,0	0/0:8,0:8:18.43:0,18,558	0/0:29,0:2:6.02:0,6,324	0/0:21,0:4:12.04:0,12,602	0/0:14,0:14:8.58:0,9,876	0/1:20,0:19:9.03:9,0,374	0/0:11,0:8:24.08:0,24,1332	0/0:21,0:10:27.09:0,27,1489	0/0:14,0:14:2.92:0,3,104	0/1:18,5:20:99:626,0,2053	0/1:18,5:23:99:160,0,2107	0/1:8,0:8:99:168,0,937	0/1:7,4:11:99:340,0,947	0/1:11,4:15:99:390,0,1201	0/0:19,0:19:54.18:0,54,2604	0/1:10,6:15:99:657,0,909	0/0:12,0:12:8.10:0,8,1191	0/1:18,1:17:98.28:98,0,1840	0/0:9,0:7:21.07:0,21,1592	0/0:17,0:17:51.16:0,51,2583	0/0:11,0:11:24:0,24,1198	0/1:13,5:18:99:480,0,1037	0/1:10,5:15:99:288,0,870	1/1:7,0:7:2.22:7,2,0	0/1:17,9:26:99:913,0,1427	0/0:19,0:17:46.04:0,46,2329	0/0:18,0:17:45.15:0,45,3062	0/1:7,2:9:99:291,0,698
chr10	31815017	.	G	GT	1192.74	PASS	AB=0.915;AC=13;AF=0.232;AN=56;BaseQRankSum=8.499;DP=502;FS=3.405;HRun=0;HaplotypeScore=188.0956;InbreedingCoeff=-0.1683;MQ=46.83;MQ0=31;MQRankSum=-8.595;QD=5.65;ReadPosRankSum=-8.024;VQSLOD=1.4758;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:1.82:0,2,5	0/0:12,0:12:23.62:0,24,334	0/0:28,0:8:24.06:0,24,316	0/0:25,0:10:27.07:0,27,349	0/0:19,0:19:16.37:0,16,398	0/0:25,0:25:23.94:0,24,335	0/0:12,0:9:27.09:0,27,378	0/0:21,0:17:45.15:0,45,629	0/0:19,0:19:15.05:0,15,209	0/1:20,3:22:73.42:73,0,615	0/1:24,6:30:87.42:87,0,536	0/1:8,0:12:99:115,0,214	0/1:15,3:18:99:279,0,221	0/1:17,1:19:99:129,0,375	0/0:21,0:20:55.12:0,55,756	0/1:14,3:17:99:136,0,346	0/0:9,1:10:0.95:0,1,348	0/1:16,1:17:0.83:1,0,436	0/0:16,0:15:43.65:0,44,569	0/0:16,0:16:47.56:0,48,610	0/0:7,0:9:19.31:0,19,255	0/1:15,2:17:99:139,0,365	0/1:13,2:15:99:186,0,280	1/1:9,0:9:2.04:6,2,0	0/1:25,1:26:99:160,0,605	0/0:21,0:20:50.51:0,51,817	0/0:23,0:22:46.77:0,47,743	0/1:7,0:7:25:25,0,167
chr10	31815022	.	AT	A	1307.20	PASS	AB=0.709;AC=14;AF=0.250;AN=56;BaseQRankSum=11.536;DP=519;FS=7.433;HRun=1;HaplotypeScore=195.3416;InbreedingCoeff=-0.1906;MQ=46.91;MQ0=22;MQRankSum=-9.105;QD=5.76;ReadPosRankSum=-1.929;VQSLOD=-0.6280;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:13:3:28,3,0	0/0:12,0:12:23.95:0,24,376	0/0:28,0:9:27.09:0,27,430	0/0:25,0:13:36.08:0,36,520	0/0:22,0:22:36.57:0,37,499	0/0:26,0:26:24.55:0,25,384	0/0:13,0:10:27.09:0,27,432	0/0:23,0:20:60.20:0,60,960	0/0:20,0:20:18.06:0,18,287	0/1:15,8:22:99:119,0,606	0/1:16,14:30:69.13:69,0,618	0/1:6,4:12:70.35:70,0,261	0/1:8,11:19:99:251,0,246	0/1:9,10:19:99:136,0,385	0/0:24,0:23:56.54:0,57,861	0/1:7,10:17:99:164,0,293	0/1:9,1:10:6.60:7,0,399	0/1:14,4:17:45.43:45,0,511	0/0:16,0:16:35.50:0,35,697	0/0:16,0:16:44.27:0,44,673	0/0:9,2:11:19.31:0,19,291	0/1:10,8:18:99:183,0,378	0/1:8,7:15:99:156,0,345	0/0:9,0:9:1.56:0,2,5	0/1:15,11:26:99:197,0,596	0/0:23,0:22:8.35:0,8,743	0/0:23,0:22:55.13:0,55,864	0/1:4,3:7:34.89:35,0,173
chr10	31815033	.	ATGG	A	4358.43	PASS	AB=0.845;AC=25;AF=0.446;AN=56;BaseQRankSum=9.414;DP=575;FS=6.168;HRun=0;HaplotypeScore=216.8815;InbreedingCoeff=-0.5951;MQ=47.37;MQ0=11;MQRankSum=-8.493;QD=9.27;ReadPosRankSum=-3.705;VQSLOD=3.4497;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:13:3.01:53,3,0	0/1:12,0:12:46.29:46,0,93	0/0:24,0:11:33.11:0,33,620	0/0:21,0:13:36.07:0,36,668	0/1:24,0:24:44.08:44,0,363	0/1:28,0:28:99:181,0,246	0/0:12,4:13:27.02:0,27,537	0/1:26,6:31:99:146,0,1450	0/1:21,0:21:20.58:21,0,183	0/1:20,8:27:99:446,0,815	0/1:22,15:37:99:272,0,690	0/1:9,4:13:99:144,0,325	0/1:11,11:22:99:396,0,271	0/1:11,9:20:99:253,0,283	0/1:25,0:24:99:134,0,794	0/1:8,10:18:99:358,0,194	0/1:10,1:11:70.17:70,0,425	0/1:18,3:20:99:222,0,686	0/1:18,1:18:37.57:38,0,878	0/0:20,0:20:17.92:0,18,616	0/1:12,1:13:16.82:17,0,325	0/1:12,8:20:99:350,0,257	0/1:14,7:21:99:388,0,281	1/1:9,0:9:3.01:39,3,0	0/1:16,11:27:99:451,0,552	0/1:23,0:23:72.46:72,0,788	0/0:24,0:23:2.46:0,2,945	0/1:10,3:13:99:217,0,212
chr10	31815036	.	G	GTACATAGA	17030.20	PASS	AB=0.799;AC=46;AF=0.821;AN=56;BaseQRankSum=5.229;DP=644;FS=3.320;HRun=0;HaplotypeScore=226.1722;InbreedingCoeff=0.2377;MQ=48.39;MQ0=11;MQRankSum=-3.323;QD=28.53;ReadPosRankSum=0.581;VQSLOD=4.3809;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,0:18:3.01:87,3,0	1/1:1,12:13:15.05:664,15,0	0/0:25,0:11:19.30:0,19,264	0/0:22,0:14:21.84:0,22,213	1/1:1,23:32:26.79:985,27,0	1/1:2,26:36:45.15:1884,45,0	1/1:15,0:13:30.02:424,30,0	0/1:35,0:34:99:305,0,448	1/1:0,20:24:24.08:964,24,0	1/1:28,0:27:80.57:1279,81,0	1/1:38,0:38:59.23:700,59,0	1/1:16,0:16:29.66:321,30,0	1/1:23,0:23:43.55:696,44,0	1/1:20,0:20:35.42:621,35,0	0/1:10,0:27:99:1403,0,112	1/1:19,0:19:36.08:870,36,0	1/1:11,0:11:29.74:341,30,0	1/1:22,0:21:19.91:531,20,0	0/1:15,0:20:99:399,0,267	0/1:12,0:26:99:172,0,182	0/1:14,0:14:56.78:64,0,57	1/1:20,0:20:34.26:643,34,0	1/1:21,0:22:44.93:649,45,0	1/1:2,0:13:1.82:5,2,0	1/1:28,0:28:65.99:1336,66,0	1/1:1,0:30:77.76:999,78,0	0/1:21,0:30:99:325,0,240	1/1:14,0:14:32.63:362,33,0
chr10	31815785	.	A	AAGAGAGAC	26126.74	PASS	AB=0.805;AC=50;AF=0.893;AN=56;BaseQRankSum=-1.974;DP=593;FS=16.250;HRun=0;HaplotypeScore=366.5837;InbreedingCoeff=0.2121;MQ=66.22;MQ0=5;MQRankSum=-7.405;QD=47.25;ReadPosRankSum=2.463;VQSLOD=3.8433;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,12:19:36.12:1419,36,0	0/1:11,5:17:39.24:1042,0,39	0/0:40,0:26:4.97:0,5,808	0/1:54,0:29:4.40:4,0,564	1/1:16,8:29:12.68:498,13,0	1/1:12,9:25:48.14:1617,48,0	1/1:11,5:17:35.84:1264,36,0	1/1:5,9:23:57.60:1393,58,0	0/1:16,7:25:7.27:1317,0,7	1/1:9,8:18:14.96:1045,15,0	1/1:10,14:25:33.03:1101,33,0	1/1:6,5:13:15.94:654,16,0	1/1:4,2:8:22.89:753,23,0	1/1:9,11:20:31.77:1611,32,0	1/1:14,7:26:40.80:1411,41,0	1/1:9,3:14:21.52:657,22,0	1/1:8,7:16:9.03:365,9,0	1/1:2,6:10:18.03:631,18,0	1/1:6,2:10:30.09:671,30,0	0/1:23,6:35:24.05:1242,0,24	1/1:3,4:7:5.99:129,6,0	1/1:12,8:22:33.10:1250,33,0	1/1:12,8:24:33.44:1392,33,0	1/1:7,13:21:4.25:553,4,0	1/1:14,11:28:35.37:1507,35,0	1/1:6,6:17:48.12:1622,48,0	1/1:8,9:17:10.48:551,10,0	1/1:10,2:12:16.30:430,16,0
chr10	31815812	.	AGGAG	A	1396.85	PASS	AB=0.862;AC=14;AF=0.250;AN=56;BaseQRankSum=11.445;DP=599;FS=0.000;HRun=0;HaplotypeScore=292.7774;InbreedingCoeff=-0.3381;MQ=51.38;MQ0=15;MQRankSum=-3.429;QD=4.90;ReadPosRankSum=-1.737;VQSLOD=1.7144;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:13,0:13:18.51:19,0,538	0/1:14,2:16:19.40:19,0,1014	0/0:70,0:24:22.99:0,23,1019	0/0:84,0:27:52.68:0,53,1111	0/1:18,9:27:99:299,0,457	0/1:22,3:25:52.77:53,0,1471	0/0:21,1:21:31:0,31,1405	0/0:26,0:26:70.07:0,70,1894	0/0:16,0:16:19.51:0,20,820	0/1:17,5:22:99:241,0,1050	0/1:20,3:23:95.13:95,0,782	0/1:11,2:13:26.32:26,0,766	0/0:8,0:8:13.12:0,13,385	0/0:16,0:16:44.73:0,45,1116	0/0:15,0:15:45.15:0,45,1221	0/0:7,0:7:17.91:0,18,516	0/0:10,0:10:11.78:0,12,346	0/0:10,0:10:21.03:0,21,507	0/0:14,0:13:39.13:0,39,1047	0/1:22,3:25:58.23:58,0,1248	0/1:5,0:5:3.57:4,0,227	0/1:18,5:23:99:123,0,1081	0/1:17,6:23:99:177,0,805	0/0:12,0:12:5.44:0,5,357	0/1:29,4:33:99:135,0,1478	0/1:17,4:21:99:142,0,1174	0/1:10,6:16:99:160,0,629	0/0:4,0:4:9.03:0,9,260
chr10	31815827	.	G	GGA	347.17	PASS	AB=0.821;AC=8;AF=0.143;AN=56;BaseQRankSum=13.059;DP=552;FS=0.534;HRun=0;HaplotypeScore=271.9863;InbreedingCoeff=-0.2080;MQ=55.53;MQ0=12;MQRankSum=-5.455;QD=1.93;ReadPosRankSum=2.570;VQSLOD=2.3020;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:12.04:0,12,195	0/1:14,2:16:13.83:14,0,480	0/0:61,0:24:46.61:0,47,617	0/0:72,0:27:55.72:0,56,734	0/1:17,9:26:74.85:75,0,221	0/0:24,3:27:8.59:0,9,778	0/0:17,1:17:32.13:0,32,642	0/0:25,0:25:75.26:0,75,1200	0/0:13,0:14:4.54:0,5,457	0/1:19,5:24:99:154,0,586	0/1:18,3:21:37.91:38,0,454	0/0:11,1:13:22.50:0,23,465	0/0:7,0:7:15.05:0,15,244	0/0:14,0:14:30.32:0,30,577	0/0:14,0:14:42.14:0,42,684	0/0:6,0:6:18.06:0,18,293	0/0:6,0:6:11.83:0,12,195	0/0:5,0:5:12.03:0,12,171	0/0:12,0:12:33.11:0,33,537	0/0:22,3:25:3.98:0,4,589	0/0:4,0:4:9.03:0,9,147	0/0:20,5:25:2.97:0,3,584	0/1:16,6:22:55.06:55,0,345	0/0:8,0:8:5.34:0,5,96	0/1:31,4:35:58.22:58,0,891	0/1:17,4:21:50.82:51,0,738	0/1:9,6:15:35.16:35,0,312	0/0:5,0:5:9.03:0,9,147
chr10	31815836	.	G	GA	10667.92	PASS	AB=0.634;AC=49;AF=0.875;AN=56;BaseQRankSum=-8.912;DP=497;FS=1.152;HRun=1;HaplotypeScore=201.9798;InbreedingCoeff=0.4799;MQ=49.16;MQ0=10;MQRankSum=-1.510;QD=26.80;ReadPosRankSum=-3.207;VQSLOD=3.6319;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,6:7:9.03:136,9,0	1/1:5,10:15:23.29:423,23,0	0/0:45,0:17:32.37:0,32,367	0/0:53,0:20:12.74:0,13,453	0/1:15,14:29:27.49:172,0,27	1/1:5,21:26:50.28:852,50,0	1/1:2,13:15:36.12:549,36,0	1/1:4,24:28:66.15:924,66,0	1/1:3,11:14:29.57:429,30,0	1/1:8,13:21:50.65:630,51,0	1/1:6,13:19:19.87:448,20,0	1/1:3,10:13:19.10:339,19,0	1/1:0,8:8:18.06:273,18,0	1/1:2,8:10:11.87:347,12,0	1/1:3,12:16:34.07:544,34,0	1/1:1,5:6:16.61:231,17,0	1/1:1,4:5:12.04:182,12,0	0/1:1,3:4:0.41:125,0,0	1/1:1,7:8:21.07:315,21,0	1/1:6,15:22:17.76:432,18,0	1/1:1,3:4:9.03:128,9,0	1/1:6,20:28:25.56:648,26,0	0/1:9,10:19:8.86:325,0,9	1/1:1,5:6:6.02:91,6,0	1/1:6,27:33:43.85:885,44,0	1/1:6,16:22:48.86:770,49,0	1/1:6,9:15:14.39:330,14,0	1/1:0,4:4:9.03:137,9,0
chr10	31815837	.	G	GA	1512.97	PASS	AB=0.919;AC=42;AF=0.750;AN=56;BaseQRankSum=-1.531;DP=492;FS=9.892;HRun=0;HaplotypeScore=237.8747;InbreedingCoeff=0.2815;MQ=47.89;MQ0=10;MQRankSum=-8.702;QD=4.16;ReadPosRankSum=2.718;VQSLOD=1.9413;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,0:7:7.24:24,7,0	0/1:13,2:15:16.61:40,0,17	0/0:42,0:15:24.19:0,24,353	0/0:48,0:19:20.09:0,20,441	0/1:20,9:29:1.28:61,0,1	1/1:23,3:26:43.15:196,43,0	0/1:15,1:15:5.33:25,0,5	0/0:27,0:27:47.75:0,48,202	1/1:14,0:14:12.82:95,13,0	1/1:16,5:21:38.38:165,38,0	1/1:16,3:19:20.72:117,21,0	0/1:12,1:13:15.63:44,0,16	1/1:8,0:8:15.42:71,15,0	1/1:10,0:10:14.80:60,15,0	0/1:16,0:16:16.79:56,0,17	1/1:7,0:7:18.37:119,18,0	1/1:6,0:6:9.46:31,9,0	0/1:4,0:4:10.40:10,0,18	0/0:8,0:8:0.69:0,1,29	1/1:19,3:22:15.90:66,16,0	1/1:4,0:4:3.28:9,3,0	1/1:24,5:29:2.23:79,2,0	1/1:13,6:19:18.77:82,19,0	1/1:6,0:6:5.19:19,5,0	1/1:29,4:33:32.52:167,33,0	1/1:18,4:22:1.28:68,1,0	1/1:9,6:15:3.22:60,3,0	1/1:3,0:3:1.92:9,2,0
chr10	31816111	.	TTAGA	T	17459.23	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=1.041;DP=433;FS=12.045;HRun=0;HaplotypeScore=87.4540;InbreedingCoeff=0.9859;MQ=92.91;MQ0=0;MQRankSum=-10.183;QD=45.00;ReadPosRankSum=6.224;VQSLOD=4.5408;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,16:17:42.14:797,42,0	1/1:0,11:10:27.09:512,27,0	0/0:16,0:16:45.15:0,45,1111	0/0:29,0:29:72.17:0,72,1870	1/1:0,10:10:27.05:436,27,0	1/1:0,20:20:57.20:1081,57,0	1/1:2,13:15:33.11:627,33,0	1/1:4,6:10:18.06:322,18,0	1/1:0,16:16:42.14:795,42,0	1/1:0,17:17:51.17:968,51,0	1/1:1,8:9:24.08:455,24,0	1/1:1,14:15:39.01:705,39,0	1/1:0,21:21:63.20:1163,63,0	1/1:1,13:14:36.12:683,36,0	1/1:1,19:20:41.83:797,42,0	1/1:3,15:18:33.11:626,33,0	1/1:1,14:15:42.14:795,42,0	1/1:0,8:8:18.06:342,18,0	1/1:4,11:15:30.08:530,30,0	1/1:1,16:15:33.11:626,33,0	1/1:0,11:11:24.08:435,24,0	1/1:2,8:10:27.09:493,27,0	1/1:1,11:12:24.08:455,24,0	1/1:3,16:19:33.11:626,33,0	1/1:0,16:16:39.13:740,39,0	1/1:1,16:17:45.15:855,45,0	1/1:2,22:24:54.19:1025,54,0	1/1:0,11:11:30.10:569,30,0
chr10	31816442	.	CCTGTGTCTGTGT	C	351.85	PASS	AB=1.000;AC=10;AF=0.208;AN=48;BaseQRankSum=4.257;DP=717;FS=12.994;HRun=0;HaplotypeScore=301.0768;InbreedingCoeff=0.5489;MQ=59.23;MQ0=12;MQRankSum=-3.501;QD=2.69;ReadPosRankSum=-0.266;VQSLOD=0.8579;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:33.11:0,33,991	1/1:4,3:7:3.01:95,3,0	0/0:47,0:26:2.70:0,3,7	./.	./.	1/1:8,9:17:3.01:79,3,0	1/1:18,8:26:2.96:19,3,0	./.	1/1:12,11:23:9.03:271,9,0	0/0:33,0:32:45.15:0,45,1239	0/0:18,0:18:12.04:0,12,388	0/0:20,0:21:27.09:0,27,974	0/0:28,0:28:45.15:0,45,1610	0/0:33,0:33:66.21:0,66,1967	0/0:33,0:33:5.82:0,6,36	0/0:32,0:32:57.18:0,57,1855	0/0:36,0:36:42.11:0,42,1469	0/1:29,0:29:0.83:1,0,1346	0/0:7,0:17:17.96:0,18,297	./.	0/1:29,0:28:12.35:12,0,86	0/0:14,0:14:12.04:0,12,315	0/0:21,0:20:9.03:0,9,218	0/0:41,0:41:57.18:0,57,1899	0/0:22,0:22:27.09:0,27,847	0/0:23,0:23:27.09:0,27,786	0/0:25,0:25:16.36:0,16,267	0/0:9,0:9:15.05:0,15,584
chr10	31816461	.	CTG	C	1194.98	PASS	AC=8;AF=0.148;AN=54;BaseQRankSum=6.771;DP=633;FS=0.000;HRun=0;HaplotypeScore=136.7790;InbreedingCoeff=0.9030;MQ=52.16;MQ0=60;MQRankSum=-2.859;QD=15.72;ReadPosRankSum=-0.215;VQSLOD=3.5750;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:51.17:0,51,887	0/0:5,0:5:2.25:0,2,43	0/0:33,0:13:33.61:0,34,471	0/0:29,0:10:11.11:0,11,176	0/0:21,0:19:39.12:0,39,618	0/0:14,0:14:11.83:0,12,137	0/0:25,0:23:21.01:0,21,300	1/1:5,6:7:18.06:255,18,0	0/0:23,0:19:18.78:0,19,239	0/0:33,0:26:72.24:0,72,1220	0/0:13,0:13:30.06:0,30,494	0/0:23,0:19:50.84:0,51,857	0/0:30,0:25:60.19:0,60,1051	0/0:32,0:30:78.27:0,78,1401	0/0:28,0:27:8.70:0,9,80	0/0:34,0:34:78.25:0,78,1362	0/0:27,0:24:55.43:0,55,957	0/0:28,0:23:57.19:0,57,986	1/1:16,0:11:30.10:414,30,0	./.	1/1:7,19:20:18.06:257,18,0	0/0:10,0:10:21.07:0,21,374	0/0:17,0:15:42.14:0,42,715	0/0:42,0:37:87.28:0,87,1479	0/0:20,0:17:45.14:0,45,771	0/0:17,0:16:42.14:0,42,736	1/1:5,18:19:30.09:425,30,0	0/0:12,0:10:18.04:0,18,298
chr10	31816487	.	GTGTC	G	114.58	PASS	AB=0.930;AC=11;AF=0.220;AN=50;BaseQRankSum=5.583;DP=486;FS=17.830;HRun=0;HaplotypeScore=96.5545;InbreedingCoeff=0.3391;MQ=41.15;MQ0=111;MQRankSum=-4.578;QD=0.94;ReadPosRankSum=-0.327;VQSLOD=0.6316;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:21.07:0,21,528	1/1:4,0:4:2.90:16,3,0	./.	./.	0/0:8,0:6:3.01:0,3,43	1/1:17,0:15:2.04:6,2,0	./.	0/0:9,0:3:6.02:0,6,86	1/1:21,0:14:8.53:49,9,0	0/0:21,0:12:24.08:0,24,554	0/0:6,0:5:9.01:0,9,167	0/0:16,0:11:15.28:0,15,556	0/0:23,0:18:42.13:0,42,999	0/0:24,0:22:42.14:0,42,1031	1/1:12,7:18:2.99:23,3,0	0/0:23,0:23:45.09:0,45,1020	0/0:19,0:16:35.76:0,36,863	0/0:25,0:20:38.30:0,38,795	0/1:15,0:12:19.93:20,0,85	0/0:15,0:12:3.01:0,3,43	0/1:26,1:19:26.83:27,0,77	0/0:7,0:6:6:0,6,102	0/0:7,0:5:3.01:0,3,78	0/0:26,0:21:42.14:0,42,1087	0/0:13,0:9:18.05:0,18,404	0/0:11,0:9:15.05:0,15,379	0/1:15,4:12:99:106,0,107	0/0:8,0:6:15.05:0,15,387
chr10	31816491	.	C	CTG	146.35	PASS	AB=0.970;AC=11;AF=0.220;AN=50;BaseQRankSum=5.493;DP=471;FS=23.849;HRun=0;HaplotypeScore=80.6029;InbreedingCoeff=0.3509;MQ=39.88;MQ0=120;MQRankSum=-4.862;QD=1.25;ReadPosRankSum=-0.159;VQSLOD=-0.3759;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:21.07:0,21,299	1/1:4,0:4:2.80:13,3,0	./.	./.	0/0:9,0:6:3.01:0,3,43	1/1:18,0:16:2.68:11,3,0	./.	0/0:11,0:4:9.03:0,9,127	1/1:21,0:14:8.15:34,8,0	0/0:19,0:9:24.08:0,24,335	0/0:6,0:5:9.01:0,9,109	0/0:16,0:11:26.10:0,26,331	0/0:23,0:17:42.13:0,42,583	0/0:20,0:18:42.14:0,42,598	1/1:11,4:14:2.99:23,3,0	0/0:24,0:23:45.08:0,45,603	0/0:20,0:17:35.43:0,35,493	0/0:25,0:20:39.04:0,39,495	0/1:15,0:12:37.77:38,0,85	0/0:15,0:12:3.01:0,3,43	0/1:25,1:18:45.82:46,0,76	0/0:6,0:4:6:0,6,67	0/0:5,0:3:3.01:0,3,43	0/0:25,0:20:42.14:0,42,602	0/0:11,0:7:18.05:0,18,240	0/0:9,0:6:15.05:0,15,215	0/1:17,1:11:99:116,0,111	0/0:8,0:6:15.05:0,15,215
chr10	31816589	.	CTG	C	1342.87	PASS	AB=0.895;AC=21;AF=0.420;AN=50;BaseQRankSum=5.722;DP=493;FS=37.061;HRun=0;HaplotypeScore=71.6213;InbreedingCoeff=0.2850;MQ=32.91;MQ0=156;MQRankSum=2.631;QD=5.27;ReadPosRankSum=-1.238;VQSLOD=0.9340;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:22,3:14:12.02:141,12,0	0/0:7,0:5:15.05:0,15,275	./.	./.	0/0:11,0:2:3.01:0,3,55	0/0:15,0:7:9.03:0,9,164	0/1:24,0:9:0.02:0,0,0	0/0:30,0:12:33.10:0,33,555	0/0:18,0:12:33.11:0,33,586	0/1:17,0:12:39.37:39,0,114	0/1:10,0:7:0:0,0,0	1/1:5,9:13:24.08:342,24,0	0/1:9,9:15:78.73:321,0,79	1/1:9,2:6:3.01:43,3,0	0/0:17,0:14:32.97:0,33,452	0/1:8,7:12:33.73:34,0,41	1/1:14,8:17:14.31:212,14,0	0/1:15,1:12:57.25:57,0,87	0/0:15,0:6:17.95:0,18,245	0/0:10,0:3:6.02:0,6,109	0/0:40,0:19:21.03:0,21,309	1/1:9,0:2:3.01:41,3,0	0/1:12,0:7:0:0,0,0	0/1:21,9:20:46.79:73,0,47	1/1:7,5:6:5.87:86,6,0	0/1:20,0:13:47.15:112,0,47	0/0:16,0:14:27.09:0,27,477	./.
chr10	31816593	.	GTCTGTGTCTGTGTCTGTGTCTGTGTCTGTC	G	5413.99	PASS	AB=1.000;AC=27;AF=0.540;AN=50;BaseQRankSum=1.362;DP=511;FS=10.174;HRun=0;HaplotypeScore=171.1586;InbreedingCoeff=0.7201;MQ=34.00;MQ0=158;MQRankSum=2.002;QD=21.74;ReadPosRankSum=-0.882;VQSLOD=2.9931;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:13:12.04:355,12,0	0/0:7,0:5:15.05:0,15,387	./.	./.	0/0:12,0:3:3.01:0,3,124	0/0:16,0:8:8.95:0,9,275	1/1:27,0:12:1.96:5,2,0	0/0:31,0:13:33.03:0,33,677	0/0:18,0:12:33.58:0,34,949	1/1:7,10:12:22.79:327,23,0	1/1:4,6:7:1.25:3,1,0	1/1:15,0:14:27.02:844,27,0	1/1:20,0:17:45.15:1376,45,0	1/1:13,0:8:6.02:146,6,0	0/0:19,0:16:33.58:0,34,1151	0/1:15,0:12:48.27:164,0,48	1/1:22,0:17:11.05:528,11,0	1/1:18,0:14:15.14:410,15,0	0/0:15,0:6:18.01:0,18,449	0/0:12,0:5:12.04:0,12,298	0/0:41,0:21:27.09:0,27,680	1/1:8,0:1:3.01:90,3,0	0/0:4,8:7:0.47:0,0,1	1/1:32,0:22:16.09:422,16,0	1/1:11,0:6:5.53:180,6,0	1/1:3,16:14:41.16:565,41,0	0/0:18,0:16:33.11:0,33,732	./.
chr10	31817197	.	T	TGCATCTTCA	58797.13	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-8.957;DP=802;FS=16.130;HRun=0;HaplotypeScore=189.8871;InbreedingCoeff=0.9844;MQ=75.93;MQ0=0;MQRankSum=-10.841;QD=79.67;ReadPosRankSum=5.422;VQSLOD=3.7357;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,16:28:51.17:2375,51,0	1/1:2,8:11:27.09:1173,27,0	0/0:35,0:35:72.25:0,72,1794	0/0:29,0:29:57.11:0,57,1279	1/1:17,15:34:57.02:2336,57,0	1/1:11,26:39:81.28:3611,81,0	1/1:10,13:25:42.14:1744,42,0	1/1:23,10:34:63.20:2274,63,0	1/1:6,18:25:54.18:2417,54,0	1/1:22,26:49:96.33:4240,96,0	1/1:8,14:28:57.19:2339,57,0	1/1:9,18:29:63.22:2899,63,0	1/1:14,15:30:48.16:2071,48,0	1/1:12,16:29:57.20:2654,57,0	1/1:12,21:33:66.23:2888,66,0	1/1:14,17:33:63.22:2822,63,0	1/1:10,12:23:36.12:1575,36,0	1/1:5,10:15:27.09:1260,27,0	1/1:18,9:25:36.12:1469,36,0	1/1:14,17:33:66.22:2586,66,0	1/1:12,4:16:17.72:829,18,0	1/1:21,17:38:72.25:3146,72,0	1/1:13,10:25:24.08:1006,24,0	1/1:6,12:18:24.46:1090,24,0	1/1:13,19:35:60.21:2763,60,0	1/1:11,16:28:69.24:3090,69,0	1/1:18,22:44:78.27:3442,78,0	1/1:0,6:6:15.05:698,15,0
chr10	31817788	.	CACACACACACACACACACACACACAT	C	5618.43	PASS	AB=1.000;AC=15;AF=0.278;AN=54;BaseQRankSum=1.327;DP=478;FS=3.249;HRun=0;HaplotypeScore=282.9825;InbreedingCoeff=0.7098;MQ=49.74;MQ0=16;MQRankSum=-2.716;QD=37.96;ReadPosRankSum=3.997;VQSLOD=3.4810;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:15.04:0,15,686	1/1:5,7:12:9.03:639,9,0	0/0:26,0:9:14.40:0,14,396	0/0:23,0:7:17.75:0,18,330	1/1:2,14:17:9.03:638,9,0	1/1:7,18:25:15.05:1065,15,0	1/1:6,8:13:3.01:213,3,0	0/0:25,0:21:38.85:0,39,259	1/1:4,8:12:9.03:639,9,0	0/0:15,0:15:44.74:0,45,1279	0/0:19,0:19:5.74:0,6,74	0/0:12,0:12:9.03:0,9,321	0/0:16,0:16:24.08:0,24,401	0/0:23,0:22:17.65:0,18,348	0/0:24,0:24:21.07:0,21,480	0/0:16,0:16:21.07:0,21,495	0/0:22,0:22:20.72:0,21,536	0/0:6,0:6:0.08:0,0,460	0/1:22,0:22:96.24:446,0,96	1/1:21,0:21:24.07:883,24,0	./.	0/0:14,0:14:6.02:0,6,295	0/0:13,0:13:8.90:0,9,392	0/0:12,0:12:14.94:0,15,394	0/0:12,0:12:14.64:0,15,284	0/0:18,0:18:26.12:0,26,1447	1/1:25,0:25:10.15:1096,10,0	0/0:5,0:5:9.03:0,9,206
chr10	31817792	.	CACACACACACACACACACACAT	C	6904.58	PASS	AB=1.000;AC=28;AF=0.519;AN=54;BaseQRankSum=7.653;DP=462;FS=5.057;HRun=0;HaplotypeScore=240.2358;InbreedingCoeff=0.3121;MQ=45.33;MQ0=17;MQRankSum=-4.970;QD=22.13;ReadPosRankSum=6.867;VQSLOD=3.0313;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:6.97:0,7,417	1/1:7,0:7:9.03:486,9,0	0/0:21,0:3:9.03:0,9,252	0/0:21,0:4:8.95:0,9,124	1/1:15,0:15:9.03:485,9,0	1/1:18,0:18:15.05:811,15,0	1/1:9,0:8:3.01:162,3,0	1/1:36,0:32:40.64:505,41,0	1/1:8,0:8:9.03:486,9,0	0/1:15,0:15:22.42:22,0,569	1/1:20,0:20:0.90:3,1,0	0/0:12,0:12:8.77:0,9,167	0/1:16,0:16:3.92:5,0,4	0/1:22,0:21:43.88:44,0,82	0/1:24,0:24:3.37:3,0,102	0/1:17,0:17:3.52:4,0,152	0/0:21,0:21:8.62:0,9,271	0/1:7,0:7:1.06:1,0,276	1/1:7,14:21:41.22:821,41,0	1/1:2,18:20:21.07:1291,21,0	./.	0/0:14,0:14:6.02:0,6,192	0/0:13,0:13:9.10:0,9,265	0/0:11,0:11:4.03:0,4,159	0/1:11,0:11:42.95:43,0,64	0/1:20,0:19:70.79:71,0,644	1/1:3,23:26:26.92:1661,27,0	0/0:8,0:8:0.29:0,0,57
chr10	31817798	.	CACACACACACACACAT	C	9027.65	PASS	AB=0.983;AC=42;AF=0.808;AN=52;BaseQRankSum=4.365;DP=424;FS=6.441;HRun=0;HaplotypeScore=189.0769;InbreedingCoeff=0.2323;MQ=45.12;MQ0=18;MQRankSum=-0.597;QD=24.94;ReadPosRankSum=3.475;VQSLOD=3.3573;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:22:75.95:76,0,162	1/1:7,0:7:9.03:361,9,0	0/0:16,0:2:3.01:0,3,49	./.	1/1:15,0:15:9.03:359,9,0	1/1:18,0:18:15.05:601,15,0	1/1:9,0:8:3.01:120,3,0	1/1:19,0:15:41.62:290,42,0	1/1:8,0:8:9.03:361,9,0	0/1:13,1:14:12.06:616,0,12	1/1:23,1:24:2.70:82,3,0	1/1:11,1:12:3.01:67,3,0	1/1:15,0:15:21.07:546,21,0	1/1:22,1:22:15.05:468,15,0	1/1:24,0:24:15.05:409,15,0	1/1:17,0:17:15.05:409,15,0	0/1:20,0:20:53.13:239,0,53	0/1:10,0:10:14.17:124,0,14	1/1:14,0:14:38.49:570,38,0	1/1:18,0:18:21.07:844,21,0	./.	0/0:13,0:13:3.01:0,3,50	0/0:13,0:13:5.58:0,6,50	1/1:10,0:10:6:106,6,0	1/1:9,2:11:14.84:402,15,0	1/1:20,1:20:13.27:642,13,0	1/1:23,0:23:26.78:1086,27,0	1/1:8,0:8:17.91:249,18,0
chr10	31817800	.	CACACACACACACAT	C	10775.29	PASS	AB=0.574;AC=45;AF=0.865;AN=52;BaseQRankSum=1.440;DP=417;FS=0.000;HRun=0;HaplotypeScore=172.8536;InbreedingCoeff=0.3022;MQ=45.35;MQ0=17;MQRankSum=-0.808;QD=29.04;ReadPosRankSum=1.822;VQSLOD=3.4065;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:4,16:20:99:123,0,138	1/1:7,0:7:9.03:319,9,0	0/0:13,0:1:3.01:0,3,30	./.	1/1:15,0:15:9.03:317,9,0	1/1:18,0:18:15.05:531,15,0	1/1:9,0:8:3.01:106,3,0	1/1:21,0:17:47.60:339,48,0	1/1:8,0:8:9.03:319,9,0	1/1:9,5:14:35.69:882,36,0	1/1:7,18:25:2.72:129,3,0	1/1:3,8:11:3.01:113,3,0	1/1:2,13:15:21.07:873,21,0	1/1:6,16:21:15.05:620,15,0	1/1:2,21:23:15.05:642,15,0	1/1:2,15:17:15.05:643,15,0	0/1:5,14:19:10.49:426,0,10	1/1:10,0:10:20.06:150,20,0	1/1:14,0:14:38.49:528,38,0	1/1:18,0:18:21.07:746,21,0	./.	0/0:5,8:13:3:0,3,25	0/1:4,9:13:0.02:0,0,1	1/1:4,5:9:3.01:129,3,0	1/1:7,5:12:18.04:544,18,0	1/1:3,17:19:54.03:994,54,0	1/1:23,0:23:26.87:961,27,0	1/1:5,3:8:17.91:343,18,0
chr10	31817812	.	CAT	C	3647.62	PASS	AB=1.000;AC=47;AF=0.870;AN=54;BaseQRankSum=0.432;DP=383;FS=0.000;HRun=0;HaplotypeScore=139.6481;InbreedingCoeff=0.3554;MQ=51.87;MQ0=10;MQRankSum=0.523;QD=10.02;ReadPosRankSum=1.888;VQSLOD=3.3237;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:19,0:19:11.40:18,0,11	1/1:7,0:7:8.95:67,9,0	0/0:8,0:3:2.88:0,3,15	0/0:8,0:1:0:0,0,0	1/1:15,0:15:8.95:66,9,0	1/1:18,0:18:14.93:112,15,0	1/1:9,0:8:2.98:22,3,0	1/1:5,24:25:71.55:534,72,0	1/1:8,0:8:8.95:67,9,0	1/1:14,0:14:41.95:360,42,0	1/1:19,0:19:2.99:25,3,0	1/1:9,0:9:2.94:18,3,0	1/1:13,0:13:19.74:145,20,0	1/1:18,0:17:14.96:119,15,0	1/1:21,0:21:14.96:121,15,0	1/1:16,0:16:14.97:122,15,0	1/1:16,0:16:10.41:76,10,0	1/1:11,0:11:26.75:191,27,0	1/1:14,0:14:38.44:277,38,0	1/1:18,0:18:20.91:159,21,0	./.	0/1:8,0:8:0:0,0,0	0/1:9,0:9:0.18:0,0,0	1/1:5,0:5:2.99:24,3,0	1/1:17,0:17:41.94:348,42,0	1/1:19,0:18:50.04:390,50,0	1/1:23,0:23:26.90:207,27,0	1/1:9,0:9:23.85:178,24,0
chr10	31819209	.	C	CATTT	3934.82	PASS	AB=1.000;AC=24;AF=0.462;AN=52;BaseQRankSum=-3.824;DP=370;FS=0.000;HRun=0;HaplotypeScore=65.7215;InbreedingCoeff=0.7320;MQ=66.58;MQ0=2;MQRankSum=-0.081;QD=19.87;ReadPosRankSum=-4.352;VQSLOD=1.9336;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:21.07:0,21,337	0/0:2,0:2:3.01:0,3,48	1/1:9,0:7:3.01:38,3,0	0/1:8,0:8:0:0,0,0	1/1:14,0:14:23.98:307,24,0	1/1:6,0:12:15.05:243,15,0	1/1:5,0:5:5.93:63,6,0	1/1:27,19:48:69.16:1306,69,0	1/1:3,0:7:3.01:52,3,0	0/0:17,0:17:33.10:0,33,511	0/0:12,0:12:18.06:0,18,291	0/0:14,0:14:21.07:0,21,327	0/0:6,0:6:12.04:0,12,194	0/0:6,0:6:12.04:0,12,190	1/1:6,0:9:6.02:98,6,0	0/0:15,0:15:21.07:0,21,327	0/1:19,0:19:7.84:8,0,566	0/0:18,0:18:36.12:0,36,569	1/1:12,11:22:36.12:805,36,0	1/1:8,5:13:9.03:218,9,0	1/1:4,2:6:6.02:145,6,0	./.	0/0:7,0:7:3.01:0,3,48	./.	0/0:15,0:15:27.09:0,27,436	0/0:19,0:19:30.10:0,30,473	1/1:13,11:24:27.09:651,27,0	0/0:19,0:20:42.14:0,42,658
chr10	31819234	.	A	AT	332.39	PASS	AB=0.926;AC=9;AF=0.167;AN=54;BaseQRankSum=8.305;DP=331;FS=4.686;HRun=3;HaplotypeScore=42.5036;InbreedingCoeff=-0.0483;MQ=65.75;MQ0=1;MQRankSum=-0.690;QD=2.94;ReadPosRankSum=0.881;VQSLOD=-0.2463;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:30.09:0,30,372	0/0:2,0:2:6.02:0,6,74	0/1:8,0:7:10.13:10,0,147	0/0:4,0:4:6.02:0,6,74	0/1:10,3:13:39.30:39,0,294	0/0:10,0:10:2.59:0,3,199	0/1:2,2:4:27.64:28,0,65	0/1:30,0:30:99:244,0,426	0/0:3,0:3:0.78:0,1,67	0/0:19,0:19:51.15:0,51,621	0/0:14,0:14:33.10:0,33,408	0/0:14,0:14:33.10:0,33,408	0/0:9,0:9:27.08:0,27,335	0/0:8,0:8:24.08:0,24,297	0/1:9,0:9:15.95:16,0,199	0/0:9,0:9:24.08:0,24,297	0/0:19,0:19:48.15:0,48,593	0/0:23,0:23:69.22:0,69,851	0/1:26,0:25:99:104,0,362	0/0:12,0:12:10.72:0,11,276	1/1:2,0:2:4.44:13,4,0	0/0:3,0:3:9.02:0,9,100	0/0:7,0:7:21.07:0,21,260	./.	0/0:16,0:16:42.13:0,42,521	0/0:16,0:16:48.15:0,48,595	0/1:21,0:21:10.19:10,0,322	0/0:17,0:17:45.03:0,45,537
chr10	31819897	.	TTTTC	T	415.06	PASS	AB=0.881;AC=15;AF=0.300;AN=50;BaseQRankSum=0.819;DP=721;FS=4.266;HRun=0;HaplotypeScore=220.7244;InbreedingCoeff=0.5857;MQ=56.74;MQ0=18;MQRankSum=2.457;QD=2.05;ReadPosRankSum=1.461;VQSLOD=2.6498;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:33:41.64:0,42,441	1/1:8,5:13:8.99:104,9,0	./.	./.	0/0:25,0:25:21.05:0,21,345	0/1:22,3:25:11.56:12,0,303	0/0:20,0:19:1.24:0,1,3	./.	0/1:10,5:14:0:0,0,0	0/0:34,0:31:14.69:0,15,196	0/0:26,0:24:6.11:0,6,69	0/1:28,0:26:12.04:12,0,266	0/0:23,0:22:15.48:0,15,175	0/0:20,0:16:6.02:0,6,72	1/1:20,0:19:18.01:196,18,0	0/0:24,0:23:10.91:0,11,100	0/0:33,0:31:27.52:0,28,284	0/0:19,0:19:9.02:0,9,92	1/1:29,0:25:11.65:73,12,0	1/1:23,0:21:9.36:40,9,0	1/1:10,0:9:2.92:17,3,0	0/0:37,0:35:15.43:0,15,194	0/0:26,0:26:18.53:0,19,281	0/0:24,0:21:3.48:0,3,37	0/0:29,0:25:22.84:0,23,292	0/0:36,0:31:4.78:0,5,120	1/1:39,0:39:14.95:122,15,0	0/0:19,0:17:9.41:0,9,65
chr10	31819901	.	C	CT	11006.13	PASS	AB=0.685;AC=28;AF=0.519;AN=54;BaseQRankSum=12.124;DP=701;FS=4.543;HRun=4;HaplotypeScore=149.7592;InbreedingCoeff=-0.1964;MQ=53.41;MQ0=22;MQRankSum=3.183;QD=19.14;ReadPosRankSum=8.658;VQSLOD=3.0583;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:20,18:36:99:690,0,302	0/1:13,0:13:24.22:24,0,297	0/0:18,0:8:15.04:0,15,175	./.	0/0:27,0:27:67.71:0,68,769	0/0:25,0:25:60.45:0,60,734	0/0:19,0:18:48.50:0,49,530	0/1:23,12:30:99:410,0,100	0/0:15,0:13:24.07:0,24,288	0/1:15,19:32:74.43:573,0,74	1/1:12,16:26:24.15:625,24,0	0/1:11,16:25:99:483,0,169	0/1:8,15:22:72.53:564,0,73	0/1:8,15:18:99:376,0,101	0/1:17,3:19:82.99:83,0,403	0/1:5,20:24:22.74:690,0,23	0/1:12,21:31:99:651,0,150	0/1:3,15:18:15.54:537,0,16	0/1:23,0:18:1.48:436,0,1	1/1:18,2:18:41.15:527,41,0	1/1:1,7:7:15.05:209,15,0	0/1:9,26:33:61.77:958,0,62	0/1:11,15:26:99:484,0,161	0/1:14,13:24:99:480,0,108	0/1:10,19:25:99:690,0,100	1/1:11,24:30:3.79:763,4,0	1/1:35,0:35:5.50:129,5,0	1/1:1,18:17:45.15:623,45,0
chr10	31819902	.	TTTCTTTC	T	10198.20	PASS	AB=1.000;AC=25;AF=0.463;AN=54;BaseQRankSum=8.257;DP=697;FS=14.898;HRun=0;HaplotypeScore=216.5918;InbreedingCoeff=-0.1517;MQ=52.33;MQ0=23;MQRankSum=5.278;QD=18.82;ReadPosRankSum=7.574;VQSLOD=2.5778;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:38,0:37:99:585,0,830	0/0:13,0:13:36.07:0,36,411	0/0:16,0:6:15.04:0,15,174	./.	0/0:26,0:26:69.22:0,69,1449	0/0:24,0:24:66.19:0,66,1424	0/0:19,0:18:51.14:0,51,637	1/1:34,0:29:33.93:476,34,0	0/0:15,0:13:24.07:0,24,288	0/1:35,0:32:99:547,0,652	0/1:26,0:24:99:537,0,228	0/1:27,0:25:99:306,0,445	0/1:23,0:22:99:494,0,244	0/1:23,0:18:99:372,0,196	0/0:20,0:19:1.84:0,2,429	0/1:25,0:24:99:553,0,177	0/1:34,0:31:99:601,0,725	0/1:19,0:19:99:488,0,168	1/1:11,12:18:35.23:608,35,0	1/1:4,15:18:39.13:609,39,0	1/1:8,0:7:15.05:234,15,0	0/1:35,0:33:99:882,0,302	0/1:26,0:26:99:443,0,517	0/1:27,0:24:99:460,0,358	0/1:29,0:25:99:566,0,609	0/1:35,0:30:99:648,0,459	1/1:2,33:35:15.05:378,15,0	0/1:19,0:17:46.35:413,0,46
chr10	31821310	.	GAC	G	2898.10	PASS	AB=0.598;AC=23;AF=0.411;AN=56;BaseQRankSum=15.925;DP=478;FS=34.870;HRun=0;HaplotypeScore=143.1114;InbreedingCoeff=0.4253;MQ=54.27;MQ0=39;MQRankSum=-14.845;QD=16.37;ReadPosRankSum=6.280;VQSLOD=1.5155;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:3,7:10:46.54:72,0,47	0/0:8,0:7:18.06:0,18,364	0/0:21,0:13:32.89:0,33,556	0/0:27,0:19:51.14:0,51,856	0/0:12,0:12:30.09:0,30,562	0/0:20,0:15:39.13:0,39,790	0/0:24,0:21:54.16:0,54,1041	0/0:36,0:32:93.28:0,93,1800	0/0:25,0:16:42.10:0,42,797	0/1:5,3:5:45.78:85,0,46	1/1:1,7:8:20.94:169,21,0	1/1:2,16:18:42.95:389,43,0	1/1:3,18:18:0.82:375,1,0	0/1:3,16:18:9.15:370,0,9	0/0:35,0:33:99:0,99,1966	1/1:3,9:12:13.02:250,13,0	0/1:3,11:13:27.19:228,0,27	1/1:1,5:5:15.02:143,15,0	0/0:15,0:15:42.13:0,42,795	0/0:11,0:11:33.07:0,33,629	0/0:33,0:32:93.24:0,93,1806	0/1:3,14:18:21.90:244,0,22	0/1:1,4:6:46.98:63,0,47	1/1:2,9:12:26.35:213,26,0	1/1:0,2:2:4.25:29,4,0	1/1:2,14:14:42.04:391,42,0	0/0:34,0:30:90.31:0,90,1821	0/1:2,3:5:33.81:71,0,34
chr10	31821313	.	TGCTTCTGC	T	8693.84	PASS	AB=0.669;AC=28;AF=0.500;AN=56;BaseQRankSum=15.845;DP=465;FS=26.389;HRun=0;HaplotypeScore=169.7325;InbreedingCoeff=0.8145;MQ=53.51;MQ0=33;MQRankSum=-14.404;QD=52.06;ReadPosRankSum=6.620;VQSLOD=3.0314;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:3,7:10:84.53:239,0,85	0/0:8,0:7:18.04:0,18,612	0/0:23,0:14:42.14:0,42,1770	0/0:25,0:20:56.55:0,57,2163	0/0:11,0:11:27.09:0,27,1216	0/0:19,0:15:39.05:0,39,1467	0/0:25,0:22:60.21:0,60,2676	0/0:36,0:33:96.30:0,96,4040	0/0:22,0:14:42.06:0,42,1646	0/1:6,3:5:11.09:254,0,11	1/1:0,7:7:18.06:402,18,0	1/1:3,16:18:51.17:1118,51,0	1/1:2,18:17:51.18:1144,51,0	1/1:3,16:18:24.33:1070,24,0	0/0:35,0:33:99:0,99,4299	1/1:2,9:10:30.10:685,30,0	1/1:2,11:12:6.96:601,7,0	1/1:1,5:5:15.05:354,15,0	0/0:15,0:15:39.12:0,39,1634	0/0:12,0:12:36.12:0,36,1526	0/0:33,0:32:96.33:0,96,4299	1/1:2,14:16:21.10:739,21,0	1/1:1,4:5:9.03:165,9,0	1/1:1,9:10:26.77:592,27,0	1/1:0,2:2:6.02:141,6,0	1/1:2,14:14:42.14:980,42,0	0/0:34,0:30:90.31:0,90,4111	1/1:1,3:4:9.03:210,9,0
chr10	31821858	.	T	TAG	10535.03	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=7.733;DP=570;FS=4.525;HRun=0;HaplotypeScore=122.0609;InbreedingCoeff=0.9984;MQ=81.97;MQ0=0;MQRankSum=-8.772;QD=40.68;ReadPosRankSum=5.179;VQSLOD=6.2953;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,13:20:39.13:701,39,0	0/0:12,0:12:33.11:0,33,462	0/0:26,0:24:48.09:0,48,743	0/0:28,0:28:62.25:0,62,845	0/0:36,0:36:96.29:0,96,1307	0/0:17,0:17:51.16:0,51,696	0/0:27,0:27:75.25:0,75,1049	0/0:30,0:30:87.28:0,87,1203	0/0:15,0:15:45.15:0,45,630	1/1:4,20:24:57.15:993,57,0	1/1:0,16:16:42.14:755,42,0	1/1:3,7:10:24.08:427,24,0	1/1:6,10:16:36.12:627,36,0	1/1:6,11:17:33.11:593,33,0	0/0:27,0:27:81.27:0,81,1132	1/1:1,11:12:30.10:540,30,0	1/1:3,21:24:45.15:810,45,0	1/1:2,14:16:39.13:702,39,0	0/0:28,0:28:69.22:0,69,950	0/0:23,0:23:66.19:0,66,889	0/0:12,0:12:33.11:0,33,462	1/1:1,15:16:36.12:645,36,0	1/1:1,16:16:42.14:755,42,0	1/1:5,17:22:54.18:956,54,0	1/1:6,11:17:42.09:689,42,0	1/1:2,21:23:60.16:1019,60,0	0/0:30,0:30:90.23:0,90,1159	1/1:3,6:9:18.06:324,18,0
chr10	31821909	.	ATTTATGT	A	8625.43	PASS	AC=28;AF=0.519;AN=54;BaseQRankSum=15.344;DP=444;FS=2.979;HRun=0;HaplotypeScore=174.3492;InbreedingCoeff=0.9850;MQ=93.10;MQ0=0;MQRankSum=-15.216;QD=56.38;ReadPosRankSum=4.766;VQSLOD=4.7034;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,14:16:42.14:1064,42,0	0/0:10,0:10:30.10:0,30,1185	0/0:28,0:28:72.18:0,72,2417	0/0:20,0:20:54.18:0,54,1778	0/0:31,0:31:93.32:0,93,3643	0/0:12,0:12:36.12:0,36,1451	0/0:25,0:25:63.22:0,63,2435	0/0:37,0:37:99:0,111,4348	0/0:15,0:15:42.14:0,42,1638	1/1:4,7:11:17.65:473,18,0	1/1:2,6:8:12.04:315,12,0	1/1:1,9:10:27.09:669,27,0	1/1:3,10:13:30.10:788,30,0	1/1:3,9:12:27.09:710,27,0	0/0:19,0:19:57.19:0,57,2147	1/1:0,5:5:15.05:394,15,0	1/1:2,10:12:27.09:710,27,0	1/1:0,9:9:27.09:671,27,0	0/0:22,0:22:66.21:0,66,2477	0/0:32,0:32:93.32:0,93,3650	0/0:13,0:13:39.13:0,39,1520	1/1:4,5:9:12.02:209,12,0	1/1:3,8:11:18.06:472,18,0	1/1:1,9:10:21.06:552,21,0	1/1:1,11:12:24.08:624,24,0	1/1:3,12:15:39.12:974,39,0	0/0:27,0:27:78.27:0,78,3148	./.
chr10	31822188	.	CAT	C	2255.84	PASS	AC=28;AF=0.519;AN=54;BaseQRankSum=12.128;DP=466;FS=10.388;HRun=0;HaplotypeScore=101.0069;InbreedingCoeff=0.8918;MQ=81.75;MQ0=1;MQRankSum=-11.736;QD=13.84;ReadPosRankSum=1.668;VQSLOD=2.9244;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,22:26:30.55:396,31,0	0/0:8,0:8:21.07:0,21,361	0/0:20,0:20:54.11:0,54,860	0/0:27,0:26:69.19:0,69,1104	0/0:28,0:28:72.25:0,72,1261	0/0:15,0:15:39.13:0,39,683	0/0:24,0:24:48.10:0,48,727	0/0:37,0:37:99:0,99,1627	0/0:19,0:18:42.14:0,42,730	1/1:4,3:7:9.03:119,9,0	1/1:1,7:8:3.48:41,3,0	1/1:1,6:7:9.03:115,9,0	1/1:1,9:10:24.08:318,24,0	1/1:3,8:11:15.05:197,15,0	0/0:31,0:31:81.26:0,81,1387	1/1:4,9:13:16.28:210,16,0	1/1:3,10:13:9.03:119,9,0	1/1:3,9:12:21.07:278,21,0	0/0:24,0:23:63.22:0,63,1105	0/0:21,0:21:63.22:0,63,1099	0/0:17,0:17:48.15:0,48,812	1/1:1,6:7:9.03:119,9,0	1/1:2,9:10:3.01:40,3,0	1/1:4,15:19:6.49:81,6,0	1/1:3,8:11:9.03:119,9,0	1/1:0,8:8:24.08:318,24,0	0/0:30,0:30:87.30:0,87,1524	./.
chr10	31822196	.	TCC	T	2378.68	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=12.274;DP=458;FS=8.637;HRun=2;HaplotypeScore=100.2539;InbreedingCoeff=0.8776;MQ=79.41;MQ0=0;MQRankSum=-12.039;QD=15.96;ReadPosRankSum=-1.065;VQSLOD=0.0804;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:23:29.58:394,30,0	0/0:10,0:10:27.07:0,27,499	0/0:23,0:23:52.95:0,53,1244	0/0:28,0:27:75.25:0,75,1293	0/0:30,0:30:87.25:0,87,1661	0/0:16,0:16:42.14:0,42,836	0/0:21,0:21:45.15:0,45,899	0/0:36,0:36:99:0,108,2072	0/0:17,0:17:42.13:0,42,804	1/1:6,0:6:10.38:125,10,0	1/1:8,0:8:3.42:42,3,0	1/1:7,0:7:9.03:116,9,0	1/1:9,1:10:24.08:326,24,0	1/1:9,1:10:15.05:208,15,0	0/0:33,0:33:87.29:0,87,1698	1/1:10,1:11:18.06:240,18,0	1/1:10,1:11:12:141,12,0	1/1:9,0:9:21.07:284,21,0	0/0:22,0:21:66.23:0,66,1314	0/0:24,0:24:69.24:0,69,1378	0/0:17,0:17:51.16:0,51,985	1/1:7,0:7:11.77:134,12,0	1/1:9,0:8:3.01:41,3,0	1/1:19,0:19:6.87:82,7,0	1/1:9,0:9:6.52:117,7,0	1/1:9,0:9:24.07:326,24,0	0/0:32,0:32:96.33:0,96,1897	1/1:1,0:1:2.97:20,3,0
chr10	31822221	.	T	TAC	3416.22	PASS	AB=0.834;AC=23;AF=0.442;AN=52;BaseQRankSum=-6.424;DP=490;FS=3.317;HRun=0;HaplotypeScore=106.1745;InbreedingCoeff=0.5377;MQ=63.57;MQ0=4;MQRankSum=-0.588;QD=15.53;ReadPosRankSum=3.725;VQSLOD=3.2178;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:19:0:0,0,0	1/1:2,10:12:27.09:435,27,0	0/0:24,0:18:17.42:0,17,198	0/0:28,0:23:20.50:0,21,316	1/1:7,22:31:51.17:771,51,0	0/1:2,13:15:6.29:405,0,6	0/1:8,11:19:9.30:345,0,9	0/0:30,0:30:57.13:0,57,651	1/1:4,12:16:24.03:378,24,0	1/1:9,0:9:5.35:53,5,0	0/1:4,0:3:0:0,0,0	0/0:10,0:10:0.47:0,0,1	0/0:10,0:10:0.80:0,1,2	1/1:16,0:16:0.26:0,0,0	1/1:10,27:36:32.84:1024,33,0	0/1:12,0:12:0:0,0,0	0/0:12,0:12:2.77:0,3,13	1/1:12,0:12:1.72:4,2,0	0/0:19,0:19:44.92:0,45,497	0/0:29,0:29:37.11:0,37,705	0/0:18,0:18:28.16:0,28,512	1/1:14,0:14:0.47:1,0,0	./.	0/1:21,0:20:0.03:0,0,0	./.	0/0:13,0:13:3.44:0,3,14	0/0:33,0:33:66.17:0,66,774	1/1:2,0:2:0.47:1,0,0
chr10	31822768	.	A	AG	1563.43	PASS	AB=0.984;AC=22;AF=0.393;AN=56;BaseQRankSum=14.803;DP=546;FS=0.376;HRun=1;HaplotypeScore=170.9000;InbreedingCoeff=0.3861;MQ=58.14;MQ0=18;MQRankSum=-14.370;QD=7.27;ReadPosRankSum=2.348;VQSLOD=0.8596;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:21:41.58:187,42,0	0/0:8,0:8:24.06:0,24,297	0/0:49,0:16:42.23:0,42,487	0/0:77,0:27:53.24:0,53,634	0/0:24,0:24:69.22:0,69,895	0/0:17,0:15:30.55:0,31,527	0/0:13,0:13:33.06:0,33,397	0/0:21,0:21:60.14:0,60,736	0/0:11,0:11:27.07:0,27,336	0/1:18,1:19:99:141,0,131	1/1:13,0:13:24.56:126,25,0	0/1:14,0:14:33.46:99,0,33	1/1:10,0:10:7.10:93,7,0	0/1:19,0:19:15.16:131,0,15	0/0:23,0:23:57.17:0,57,725	1/1:13,0:13:7.22:139,7,0	0/1:16,0:16:44.38:112,0,44	0/1:11,0:11:50.78:91,0,51	0/0:16,0:16:45.15:0,45,584	0/0:23,0:23:69.20:0,69,869	0/0:13,0:13:29.78:0,30,368	1/1:15,2:17:34.11:173,34,0	1/1:12,1:12:22.26:104,22,0	0/1:5,0:5:7.17:7,0,25	0/1:10,0:10:18.38:68,0,18	0/1:23,2:25:99:186,0,100	0/0:35,0:34:96.27:0,96,1193	1/1:8,0:8:22.37:104,22,0
chr10	31822769	.	G	GA	1033.50	PASS	AB=0.968;AC=22;AF=0.393;AN=56;BaseQRankSum=14.883;DP=556;FS=1.719;HRun=2;HaplotypeScore=180.2532;InbreedingCoeff=0.4234;MQ=57.71;MQ0=19;MQRankSum=-14.260;QD=4.63;ReadPosRankSum=0.646;VQSLOD=0.4468;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:21:30.99:123,31,0	0/0:8,0:8:21.07:0,21,260	0/0:52,0:16:39.32:0,39,446	0/0:76,0:27:53.20:0,53,609	0/0:24,0:24:69.20:0,69,841	0/0:18,0:16:11.80:0,12,487	0/0:13,0:13:30.09:0,30,368	0/0:22,0:22:54.16:0,54,658	0/0:10,0:10:24.08:0,24,297	0/1:18,1:19:99:120,0,115	1/1:12,0:12:17.64:53,18,0	0/1:13,0:14:29.09:37,0,29	1/1:9,1:10:16.67:90,17,0	0/1:18,1:20:30.79:72,0,31	0/0:23,0:23:54.17:0,54,669	1/1:13,1:14:28.57:151,29,0	0/1:17,0:17:50.23:72,0,50	0/1:10,1:11:57.75:58,0,58	0/0:16,0:15:45.14:0,45,554	0/0:23,0:23:63.20:0,63,781	0/0:13,0:13:26.84:0,27,334	1/1:15,2:18:26.95:169,27,0	1/1:14,0:13:18.68:71,19,0	0/1:5,0:5:0.18:0,0,16	0/1:12,1:12:15.53:84,0,16	0/1:27,0:27:92.64:93,0,98	0/0:35,0:34:86.94:0,87,1052	1/1:8,0:8:14.23:39,14,0
chr10	31822770	.	A	AGG	5861.92	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=14.052;DP=551;FS=5.761;HRun=1;HaplotypeScore=169.6171;InbreedingCoeff=0.9808;MQ=57.36;MQ0=24;MQRankSum=-14.037;QD=26.52;ReadPosRankSum=0.324;VQSLOD=3.9078;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,15:20:44.69:537,45,0	0/0:7,0:7:21.07:0,21,339	0/0:53,0:16:34.08:0,34,427	0/0:80,0:27:52.12:0,52,702	0/0:24,0:24:69.19:0,69,1014	0/0:18,0:16:45.12:0,45,664	0/0:13,0:13:32.91:0,33,456	0/0:20,0:20:57.16:0,57,820	0/0:9,0:9:24.07:0,24,367	1/1:9,7:17:27.58:379,28,0	1/1:3,9:12:27.08:333,27,0	1/1:4,10:14:39.02:460,39,0	1/1:3,7:11:27.07:326,27,0	1/1:4,14:20:51.40:567,51,0	0/0:22,0:22:57.03:0,57,839	1/1:2,6:13:30.99:390,31,0	1/1:5,11:17:44.73:505,45,0	1/1:5,6:11:29.47:296,29,0	0/0:16,0:15:45.11:0,45,636	0/0:22,0:22:66.18:0,66,1037	0/0:13,0:13:29.94:0,30,458	1/1:7,8:18:26.61:344,27,0	1/1:3,10:14:18.53:315,19,0	1/1:4,2:6:5.97:56,6,0	1/1:7,6:12:16.14:222,16,0	1/1:8,18:26:71.19:809,71,0	0/0:33,0:32:96.12:0,96,1392	1/1:0,8:8:24.08:323,24,0
chr10	31822771	.	A	AG	3514.02	PASS	AB=0.664;AC=28;AF=0.500;AN=56;BaseQRankSum=14.046;DP=552;FS=3.300;HRun=1;HaplotypeScore=170.2050;InbreedingCoeff=0.7984;MQ=56.95;MQ0=27;MQRankSum=-14.057;QD=15.76;ReadPosRankSum=0.557;VQSLOD=3.8069;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,15:20:43.42:333,43,0	0/0:7,0:7:21.07:0,21,273	0/0:52,0:15:39.30:0,39,445	0/0:81,0:27:51.36:0,51,609	0/0:25,0:24:66.21:0,66,855	0/0:18,0:16:34.51:0,35,547	0/0:12,0:12:30.10:0,30,388	0/0:21,0:20:54.16:0,54,679	0/0:9,0:9:24.08:0,24,310	0/1:9,8:17:28.50:242,0,28	1/1:3,10:12:26.47:206,26,0	1/1:3,11:14:11.87:240,12,0	1/1:4,7:11:26.88:207,27,0	1/1:5,14:20:7.41:278,7,0	0/0:22,0:22:60.07:0,60,736	1/1:5,6:13:35.80:296,36,0	1/1:6,11:17:13.88:288,14,0	0/1:5,6:11:15.61:155,0,16	0/0:16,0:15:45.12:0,45,556	0/0:21,0:21:63.20:0,63,818	0/0:13,0:13:26.84:0,27,350	1/1:9,8:18:35.98:259,36,0	1/1:4,10:14:20.39:205,20,0	1/1:4,2:6:2.98:22,3,0	1/1:6,7:12:10.18:141,10,0	1/1:9,18:27:7.87:444,8,0	0/0:32,0:31:93.11:0,93,1147	1/1:0,8:8:23.96:198,24,0
chr10	31822782	.	GA	G	573.32	PASS	AB=0.885;AC=11;AF=0.196;AN=56;BaseQRankSum=7.857;DP=519;FS=137.349;HRun=2;HaplotypeScore=169.7057;InbreedingCoeff=-0.2576;MQ=47.89;MQ0=31;MQRankSum=-5.584;QD=3.43;ReadPosRankSum=1.392;VQSLOD=0.1486;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:17,3:20:95.08:95,0,116	0/0:6,0:6:14.98:0,15,182	0/0:45,0:9:15.25:0,15,164	0/0:70,0:18:35.57:0,36,478	0/0:22,0:21:51.10:0,51,631	0/0:19,0:17:42.95:0,43,521	0/0:12,1:13:30.01:0,30,368	0/0:24,0:23:61.69:0,62,776	0/0:10,0:10:21:0,21,244	0/1:12,1:13:40.47:40,0,260	0/0:14,0:12:26.65:0,27,176	0/1:14,0:13:21.78:22,0,86	0/1:9,0:9:30.90:31,0,164	0/1:16,3:19:99:115,0,120	0/0:23,0:23:54.92:0,55,607	0/1:12,3:15:67.99:113,0,68	0/0:15,1:16:7.06:0,7,254	0/1:9,1:10:15.65:16,0,171	0/0:15,0:15:35.91:0,36,363	0/0:20,0:20:50.23:0,50,607	0/0:13,0:13:26.98:0,27,320	0/1:14,5:18:61.06:133,0,61	0/1:15,2:16:35.11:35,0,91	0/0:3,1:4:2.97:0,3,20	0/1:7,4:11:72.72:107,0,73	0/1:18,2:20:13.54:14,0,464	0/0:25,0:25:65.08:0,65,765	0/0:8,0:8:18.04:0,18,240
chr10	31822783	.	AAGAGAGAGAG	A	2745.64	PASS	AB=0.878;AC=27;AF=0.519;AN=52;BaseQRankSum=6.667;DP=531;FS=50.267;HRun=0;HaplotypeScore=215.6392;InbreedingCoeff=0.5102;MQ=47.39;MQ0=32;MQRankSum=-3.687;QD=11.07;ReadPosRankSum=-1.288;VQSLOD=1.1719;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:22:8.93:126,9,0	0/0:6,0:6:9.01:0,9,198	0/0:46,0:9:0.89:0,1,2	0/0:71,0:18:0.47:0,0,1	0/0:24,0:23:9.03:0,9,293	0/0:22,0:20:14.77:0,15,593	0/0:14,0:14:6.02:0,6,185	0/0:29,0:28:14.95:0,15,66	0/0:11,0:11:2.97:0,3,130	1/1:11,2:13:4.77:257,5,0	1/1:12,2:12:6.02:111,6,0	1/1:14,0:13:2.92:17,3,0	1/1:9,0:10:6.02:139,6,0	1/1:18,0:19:15:212,15,0	0/1:18,3:24:14.60:378,0,15	1/1:14,0:15:18.06:370,18,0	1/1:14,2:16:12.03:265,12,0	0/1:10,0:10:64.80:80,0,65	0/0:17,0:16:24.96:0,25,549	0/0:17,0:19:17.22:0,17,193	0/0:13,0:12:2.99:0,3,24	1/1:17,2:18:19.62:426,20,0	1/1:14,0:15:12.01:230,12,0	./.	1/1:10,0:11:14.97:175,15,0	1/1:19,0:19:6.02:74,6,0	0/1:20,0:24:61.55:62,0,116	./.
chr10	31822793	.	G	GGA	193.87	PASS	AB=0.972;AC=9;AF=0.167;AN=54;BaseQRankSum=7.146;DP=507;FS=41.915;HRun=0;HaplotypeScore=163.9463;InbreedingCoeff=0.2180;MQ=40.93;MQ0=34;MQRankSum=-4.272;QD=2.11;ReadPosRankSum=-1.372;VQSLOD=1.3047;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:5.84:0,6,81	0/0:7,0:7:15.88:0,16,210	0/0:37,0:5:7.37:0,7,71	0/0:59,0:13:11.04:0,11,261	0/0:23,0:22:36.10:0,36,514	0/0:18,0:17:34.66:0,35,456	0/0:15,0:15:24.22:0,24,385	0/0:29,0:28:73.79:0,74,1032	0/0:15,0:15:23.95:0,24,319	0/1:15,1:16:34.63:35,0,270	1/1:12,0:10:5.93:50,6,0	0/0:14,0:13:4.21:0,4,49	0/0:9,0:9:11.65:0,12,152	0/0:16,0:17:0.73:0,1,71	0/0:21,0:21:18.95:0,19,548	0/1:12,0:14:11.55:12,0,52	0/1:10,1:11:36.74:37,0,163	0/0:11,0:9:4.49:0,4,167	0/0:20,0:18:51.11:0,51,669	0/0:24,0:23:44.79:0,45,621	0/0:17,0:16:20.77:0,21,321	1/1:14,5:18:19.79:186,20,0	0/0:16,0:15:3.94:0,4,40	./.	0/1:12,0:12:6.04:6,0,12	0/0:13,0:15:7.33:0,7,420	0/0:22,0:21:60.03:0,60,769	0/1:8,0:7:0.27:0,0,185
chr10	31823345	.	CTG	C	1784.67	PASS	AB=0.958;AC=24;AF=0.444;AN=54;BaseQRankSum=8.848;DP=483;FS=0.000;HRun=0;HaplotypeScore=113.7516;InbreedingCoeff=0.5646;MQ=58.56;MQ0=13;MQRankSum=-4.042;QD=6.44;ReadPosRankSum=0.858;VQSLOD=3.2794;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:17,6:23:9.01:115,9,0	0/0:5,0:5:8.06:0,8,56	0/1:48,0:16:41.18:41,0,129	0/1:34,0:10:3.35:3,0,76	0/0:14,0:14:6.26:0,6,30	0/0:21,0:21:11.16:0,11,98	0/1:20,0:20:0.34:18,0,0	0/0:26,0:26:69.20:0,69,1091	0/0:16,0:16:18.70:0,19,113	1/1:4,2:6:9.03:118,9,0	0/1:7,1:7:0:0,0,0	0/1:12,1:13:6.16:19,0,6	1/1:8,4:12:18.06:225,18,0	1/1:8,3:11:12.03:137,12,0	0/0:24,0:24:7.26:0,7,56	1/1:17,6:23:27.01:314,27,0	1/1:15,1:16:13.44:102,13,0	0/1:12,1:13:6.98:167,0,7	0/0:15,0:15:33.11:0,33,554	0/0:20,0:20:57.19:0,57,948	0/0:26,0:26:69.24:0,69,1154	0/0:5,1:6:2.74:0,3,12	0/0:4,1:4:0:0,0,0	1/1:22,2:23:21:249,21,0	1/1:6,1:7:8.96:99,9,0	1/1:15,4:16:35.80:360,36,0	0/0:26,0:26:63.08:0,63,971	./.
chr10	31823350	.	T	TACACACACACACAC	3580.43	PASS	AB=0.963;AC=28;AF=0.560;AN=50;BaseQRankSum=7.211;DP=481;FS=1.162;HRun=0;HaplotypeScore=196.8332;InbreedingCoeff=0.1272;MQ=53.18;MQ0=16;MQRankSum=-7.217;QD=11.66;ReadPosRankSum=-4.241;VQSLOD=1.8528;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:21:1.45:15,1,0	0/1:5,0:5:15.71:174,0,16	0/1:45,0:13:29.46:29,0,196	0/0:36,0:8:11.95:0,12,137	0/1:15,0:15:4.17:4,0,164	0/1:22,0:22:99:159,0,153	0/1:20,0:20:99:191,0,192	0/0:29,0:29:74.80:0,75,1761	0/1:16,0:16:99:292,0,269	1/1:7,0:7:14.23:148,14,0	./.	1/1:9,1:10:3:25,3,0	1/1:12,0:12:5.01:125,5,0	1/1:10,1:11:3.61:67,4,0	0/1:23,0:23:99:194,0,162	1/1:21,1:22:7.44:355,7,0	1/1:12,3:14:15.82:657,16,0	0/1:11,0:11:6.11:467,0,6	0/0:15,0:15:39.13:0,39,1073	0/0:23,0:23:66.20:0,66,2043	0/0:30,0:30:77.79:0,78,2345	./.	1/1:6,0:5:0.47:1,0,0	0/1:21,0:19:3.86:316,0,4	0/1:2,2:5:4.91:174,0,5	1/1:20,0:17:15.88:187,16,0	0/0:29,0:29:75.24:0,75,2374	./.
chr10	31823352	.	T	TACACACACAC	5885.52	PASS	AB=1.000;AC=41;AF=0.820;AN=50;BaseQRankSum=5.867;DP=599;FS=4.488;HRun=0;HaplotypeScore=226.5548;InbreedingCoeff=0.5430;MQ=48.99;MQ0=18;MQRankSum=-6.503;QD=14.57;ReadPosRankSum=-1.192;VQSLOD=3.2559;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:33,0:32:5.71:85,6,0	1/1:4,2:7:8.99:317,9,0	./.	./.	1/1:20,0:21:2.71:64,3,0	1/1:21,3:24:6.91:299,7,0	1/1:21,3:24:16.41:446,16,0	0/1:27,0:29:69.77:70,0,240	1/1:17,4:22:12.04:458,12,0	1/1:11,0:10:18.06:657,18,0	./.	1/1:19,0:18:10.64:254,11,0	1/1:13,0:13:3.01:72,3,0	1/1:18,0:17:8.14:200,8,0	1/1:33,0:33:8.44:270,8,0	1/1:28,0:28:9.01:282,9,0	1/1:21,0:20:17.75:803,18,0	1/1:13,0:13:18.27:641,18,0	0/0:15,0:15:15.03:0,15,376	0/0:24,0:24:39.12:0,39,1063	0/0:31,0:31:14.63:0,15,863	1/1:11,0:10:5.05:109,5,0	1/1:11,0:10:3.01:44,3,0	1/1:28,0:25:9.33:200,9,0	1/1:12,0:12:3.01:128,3,0	1/1:24,0:20:16.68:347,17,0	0/0:26,0:29:48.50:0,48,1456	1/1:1,0:1:3.01:141,3,0
chr10	31824059	.	A	ACAC	19210.85	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=13.323;DP=697;FS=5.454;HRun=0;HaplotypeScore=158.8030;InbreedingCoeff=0.9951;MQ=80.54;MQ0=0;MQRankSum=-13.774;QD=53.22;ReadPosRankSum=3.018;VQSLOD=6.5803;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,20:32:60.21:1306,60,0	0/0:6,0:6:12.04:0,12,186	0/0:35,0:35:79.95:0,80,1189	0/0:19,0:19:45.13:0,45,687	0/0:25,0:25:66.21:0,66,1015	0/0:27,0:27:81.28:0,81,1283	0/0:27,0:27:69.22:0,69,1066	0/0:27,0:27:54.17:0,54,833	0/0:30,0:30:84.29:0,84,1332	1/1:4,21:24:57.20:1244,57,0	1/1:4,9:14:21.07:454,21,0	1/1:5,18:24:57.20:1241,57,0	1/1:2,30:33:93.32:2027,93,0	1/1:3,26:31:84.25:1775,84,0	0/0:24,0:24:69.24:0,69,1094	1/1:1,20:21:57.20:1245,57,0	1/1:2,23:25:66.23:1439,66,0	1/1:0,10:10:30.10:655,30,0	0/0:21,0:21:54.16:0,54,791	0/0:39,0:39:99:0,117,1784	0/0:33,0:33:87.30:0,87,1380	1/1:7,17:25:60.21:1302,60,0	1/1:4,23:29:75.01:1625,75,0	1/1:5,15:20:42.14:904,42,0	1/1:1,18:20:54.19:1177,54,0	1/1:5,30:37:93.30:1972,93,0	0/0:23,0:23:63.18:0,63,923	1/1:0,13:14:34.68:845,35,0
chr10	31824437	.	AG	A	9580.95	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=19.678;DP=644;FS=0.297;HRun=4;HaplotypeScore=101.1685;InbreedingCoeff=0.9977;MQ=91.92;MQ0=0;MQRankSum=-4.429;QD=32.15;ReadPosRankSum=2.518;VQSLOD=4.8621;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,27:29:72.22:863,72,0	0/0:10,0:10:30.10:0,30,415	0/0:23,0:23:56.10:0,56,777	0/0:32,0:32:82.09:0,82,1048	0/0:18,0:18:51.14:0,51,676	0/0:31,0:31:93.26:0,93,1248	0/0:19,0:19:57.18:0,57,780	0/0:27,0:27:75.24:0,75,1035	0/0:24,0:24:69.23:0,69,964	1/1:0,19:19:57.13:667,57,0	1/1:0,19:19:54.17:646,54,0	1/1:0,16:16:45.14:539,45,0	1/1:0,21:21:60.18:719,60,0	1/1:2,14:16:39.12:467,39,0	0/0:31,0:31:90.29:0,90,1243	1/1:2,12:14:36.06:414,36,0	1/1:0,24:24:69.21:826,69,0	1/1:1,14:15:39.12:467,39,0	0/0:18,0:17:51.15:0,51,694	0/0:43,0:43:99:0,117,1583	0/0:39,0:39:99:0,111,1524	1/1:1,25:26:69.14:809,69,0	1/1:0,21:21:57.17:683,57,0	1/1:3,23:26:63.19:755,63,0	1/1:0,22:22:60.18:720,60,0	1/1:2,23:25:69.21:827,69,0	0/0:31,0:31:90.30:0,90,1258	1/1:0,5:5:15.05:178,15,0
chr10	31824574	.	TG	T	4935.27	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=19.848;DP=555;FS=5.408;HRun=1;HaplotypeScore=136.1801;InbreedingCoeff=0.9929;MQ=83.75;MQ0=0;MQRankSum=-15.297;QD=19.51;ReadPosRankSum=3.715;VQSLOD=5.1996;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,14:15:38.73:290,39,0	0/0:12,0:12:36.12:0,36,573	0/0:20,0:20:57.18:0,57,876	0/0:20,0:20:34.85:0,35,820	0/0:38,0:38:99:0,114,1820	0/0:30,0:30:90.28:0,90,1390	0/0:18,0:18:54.18:0,54,863	0/0:28,0:28:84.28:0,84,1321	0/0:19,0:19:57.19:0,57,911	1/1:1,25:26:71.58:549,72,0	1/1:3,16:18:44.92:319,45,0	1/1:1,14:15:43:291,43,0	1/1:1,22:23:63.64:449,64,0	1/1:0,15:15:44.68:342,45,0	0/0:30,0:30:90.29:0,90,1416	1/1:0,15:15:44.63:328,45,0	1/1:3,9:12:28.60:213,29,0	1/1:0,10:10:25.50:177,26,0	0/0:22,0:22:66.22:0,66,1035	0/0:21,0:21:63.21:0,63,1007	0/0:20,0:20:60.19:0,60,935	1/1:2,18:20:54.90:391,55,0	1/1:2,11:13:31.38:213,31,0	1/1:3,8:11:10.74:187,11,0	1/1:3,17:20:41.74:391,42,0	1/1:1,32:33:89.36:663,89,0	0/0:24,0:24:72.25:0,72,1151	1/1:0,6:6:17.89:133,18,0
chr10	31824577	.	TAA	T	6433.22	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=19.973;DP=572;FS=3.665;HRun=2;HaplotypeScore=143.3154;InbreedingCoeff=0.9833;MQ=82.58;MQ0=0;MQRankSum=-14.584;QD=25.03;ReadPosRankSum=4.652;VQSLOD=4.0291;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,14:14:36.05:347,36,0	0/0:12,0:12:36.12:0,36,731	0/0:21,0:21:60.20:0,60,1170	0/0:19,0:19:42.16:0,42,990	0/0:38,0:38:99:0,114,2268	0/0:30,0:30:90.29:0,90,1787	0/0:18,0:18:54.19:0,54,1097	0/0:30,0:30:90.31:0,90,1818	0/0:22,0:22:66.21:0,66,1258	1/1:2,25:27:61.24:700,61,0	1/1:2,16:17:41.87:376,42,0	1/1:1,14:15:44.68:393,45,0	1/1:2,22:24:65.63:582,66,0	1/1:0,15:15:45.06:445,45,0	0/0:30,0:30:90.31:0,90,1826	1/1:0,15:15:45.05:430,45,0	1/1:3,9:12:33.82:286,34,0	1/1:0,10:10:26.75:238,27,0	0/0:27,0:27:81.25:0,81,1557	0/0:23,0:23:69.22:0,69,1328	0/0:19,0:19:57.16:0,57,1118	1/1:2,18:20:58.82:528,59,0	1/1:3,11:14:37.93:313,38,0	1/1:3,8:11:12.59:231,13,0	1/1:3,17:20:46.82:506,47,0	1/1:2,32:34:78.95:878,79,0	0/0:26,0:26:78.25:0,78,1489	1/1:2,6:8:6.67:180,7,0
chr10	31825622	.	AAG	A	13203.77	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=18.047;DP=655;FS=8.066;HRun=0;HaplotypeScore=109.1209;InbreedingCoeff=0.9755;MQ=58.13;MQ0=0;MQRankSum=-6.111;QD=35.98;ReadPosRankSum=4.198;VQSLOD=6.6939;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,38:41:93.31:1303,93,0	0/0:9,0:9:24.08:0,24,427	0/0:15,0:11:28.34:0,28,459	0/0:10,0:8:20.67:0,21,325	0/0:12,0:12:36.12:0,36,636	0/0:19,0:19:57.20:0,57,1027	0/0:21,0:21:54.19:0,54,966	0/0:37,0:37:99:0,105,1824	0/0:26,0:26:72.25:0,72,1271	1/1:0,22:22:63.21:881,63,0	1/1:4,13:17:33.11:462,33,0	1/1:0,23:23:57.19:798,57,0	1/1:1,25:26:57.19:797,57,0	1/1:2,21:23:54.18:747,54,0	0/0:29,0:29:81.28:0,81,1450	1/1:2,21:23:3.15:696,3,0	1/1:1,41:42:99:1616,117,0	1/1:0,17:17:48.16:672,48,0	0/0:16,0:15:45.15:0,45,796	0/0:17,0:17:48.16:0,48,853	0/0:42,0:42:99:0,120,2155	1/1:1,21:22:60.20:840,60,0	1/1:2,15:17:42.14:588,42,0	1/1:0,22:22:66.22:924,66,0	1/1:0,26:25:72.24:1003,72,0	1/1:1,33:34:99:1373,99,0	0/0:35,0:35:96.31:0,96,1685	1/1:0,12:12:36.12:504,36,0
chr10	31825906	.	AAAAAG	A	4445.64	PASS	AB=0.667;AC=29;AF=0.518;AN=56;BaseQRankSum=11.124;DP=428;FS=52.125;HRun=0;HaplotypeScore=101.5203;InbreedingCoeff=0.8216;MQ=66.04;MQ0=0;MQRankSum=-8.470;QD=26.78;ReadPosRankSum=0.436;VQSLOD=2.1622;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,8:10:6:82,6,0	0/0:5,0:5:12.04:0,12,354	0/0:20,0:17:33.11:0,33,841	0/0:17,0:14:30.01:0,30,432	0/0:26,0:26:72.20:0,72,1924	0/0:20,0:20:51.16:0,51,1290	0/0:20,0:20:51.17:0,51,1401	0/0:32,0:32:69.17:0,69,1947	0/0:23,0:23:57.19:0,57,1549	1/1:2,8:9:18.06:350,18,0	1/1:2,18:20:45.07:792,45,0	1/1:3,8:10:9.03:175,9,0	1/1:1,10:10:12.04:233,12,0	1/1:3,8:11:12.03:234,12,0	0/0:22,0:22:51.14:0,51,1337	0/1:4,4:8:76.23:163,0,76	1/1:3,6:9:9.03:175,9,0	1/1:2,3:5:3:58,3,0	0/0:16,0:16:36.12:0,36,1058	0/0:31,0:31:81.28:0,81,2322	0/0:14,0:14:36.12:0,36,993	1/1:3,3:6:6.02:117,6,0	1/1:2,13:15:33.11:642,33,0	1/1:3,7:8:3.01:58,3,0	1/1:4,14:18:21.07:409,21,0	1/1:3,11:14:30.04:487,30,0	0/0:16,0:16:48.16:0,48,1392	1/1:0,8:8:24.08:467,24,0
chr10	31826042	.	A	AGATACATTTGCAGCGTTGTT	30760.20	PASS	AB=0.757;AC=46;AF=0.958;AN=48;BaseQRankSum=-2.099;DP=247;FS=9.461;HRun=0;HaplotypeScore=355.3082;InbreedingCoeff=-0.0762;MQ=65.61;MQ0=0;MQRankSum=-2.030;QD=125.04;ReadPosRankSum=2.261;VQSLOD=3.6365;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,0:1:3.01:73,3,0	1/1:14,0:14:20.89:1864,21,0	0/1:6,0:8:18.62:643,0,19	0/1:3,1:5:16.13:528,0,16	1/1:18,0:18:36.12:1995,36,0	1/1:11,0:11:12.04:915,12,0	1/1:11,0:11:21.07:1630,21,0	1/1:20,0:20:51.17:2707,51,0	1/1:11,0:11:24.04:1681,24,0	1/1:13,0:13:27.09:1809,27,0	1/1:9,0:9:14.72:899,15,0	./.	1/1:1,0:1:3.01:259,3,0	./.	1/1:15,0:15:24.06:1680,24,0	1/1:4,0:4:12.04:921,12,0	./.	./.	1/1:8,0:8:24.08:1811,24,0	1/1:12,0:12:27.09:1809,27,0	1/1:4,0:4:9.03:609,9,0	1/1:9,0:9:9.03:683,9,0	1/1:18,0:18:29.46:1714,29,0	1/1:1,0:1:3.01:211,3,0	1/1:19,0:19:42.20:3422,42,0	1/1:10,0:10:21.07:1015,21,0	1/1:13,0:13:21.48:934,21,0	1/1:11,0:11:17.63:950,18,0
chr10	31827289	.	GA	G	10403.37	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=13.051;DP=672;FS=0.615;HRun=7;HaplotypeScore=70.5732;InbreedingCoeff=0.9686;MQ=79.93;MQ0=0;MQRankSum=-4.200;QD=26.27;ReadPosRankSum=5.340;VQSLOD=5.1551;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,32:33:87.20:886,87,0	0/0:9,0:9:27.05:0,27,323	0/0:22,0:22:38.49:0,38,597	0/0:16,0:16:29.21:0,29,360	0/0:30,0:30:72.22:0,72,892	0/0:21,0:21:63.20:0,63,795	0/0:17,0:17:45.14:0,45,567	0/0:40,0:40:99:0,114,1375	0/0:23,0:23:60.18:0,60,743	1/1:0,27:27:78.17:795,78,0	1/1:1,26:27:75.16:763,75,0	1/1:1,33:34:90.20:917,90,0	1/1:2,27:29:66.14:673,66,0	1/1:1,15:16:42.09:428,42,0	1/1:3,25:28:72.16:734,72,0	1/1:3,12:15:1.25:329,1,0	1/1:7,21:28:60.13:611,60,0	1/1:1,20:21:60.14:611,60,0	0/0:13,0:13:39.03:0,39,460	0/0:30,1:31:53.67:0,54,979	0/0:16,0:16:45.13:0,45,555	1/1:0,13:13:33.07:336,33,0	1/1:4,24:28:65.76:671,66,0	1/1:0,17:17:48.11:489,48,0	1/1:5,24:29:72.15:733,72,0	1/1:4,27:31:81.18:826,81,0	0/0:38,0:38:99:0,111,1357	1/1:0,20:20:60.09:601,60,0
chr10	31828036	.	T	TAACCAACC	5056.49	PASS	AB=0.561;AC=29;AF=0.518;AN=56;BaseQRankSum=-5.382;DP=701;FS=0.467;HRun=0;HaplotypeScore=124.0948;InbreedingCoeff=0.7781;MQ=62.83;MQ0=5;MQRankSum=0.119;QD=13.20;ReadPosRankSum=-0.383;VQSLOD=3.8444;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:6,35:44:21.54:625,22,0	0/0:12,0:12:33.06:0,33,442	0/0:25,0:18:35.35:0,35,357	0/0:27,0:20:35.39:0,35,501	0/0:20,0:19:45.01:0,45,610	0/0:22,0:22:54.10:0,54,864	0/0:23,0:22:54.04:0,54,711	0/0:32,0:30:66.08:0,66,908	0/0:20,0:20:51.08:0,51,741	1/1:5,11:18:30.05:466,30,0	1/1:1,19:20:20.79:194,21,0	1/1:4,17:22:3.01:128,3,0	1/1:1,23:28:3.48:117,3,0	1/1:1,22:25:2.97:56,3,0	0/0:26,0:26:66.17:0,66,1232	1/1:3,19:23:6.02:226,6,0	0/1:5,17:23:39.38:163,0,39	1/1:0,27:30:3.01:128,3,0	0/0:29,0:27:60.01:0,60,927	0/0:26,0:26:66.19:0,66,1249	0/0:26,0:26:59.83:0,60,955	1/1:1,18:21:29.85:539,30,0	1/1:3,15:19:13.92:390,14,0	1/1:3,33:38:3.01:36,3,0	1/1:1,22:26:6.02:255,6,0	1/1:3,22:26:62.70:1079,63,0	0/0:30,0:30:63.15:0,63,1069	1/1:20,0:20:51.04:655,51,0
chr10	31828048	.	TAACC	T	1626.73	PASS	AC=8;AF=0.160;AN=50;BaseQRankSum=-7.277;DP=678;FS=32.359;HRun=0;HaplotypeScore=110.5731;InbreedingCoeff=0.8828;MQ=57.54;MQ0=6;MQRankSum=3.101;QD=14.02;ReadPosRankSum=2.634;VQSLOD=1.6517;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:24.04:0,24,360	0/0:12,0:12:21.04:0,21,364	./.	./.	0/0:23,0:22:30.02:0,30,505	0/0:21,0:21:30.10:0,30,647	0/0:21,0:20:30.10:0,30,700	./.	0/0:22,0:22:29.82:0,30,529	0/0:21,0:21:39.09:0,39,629	0/0:16,0:16:0:0,0,0	0/0:21,0:21:15.05:0,15,254	0/0:29,0:29:12.04:0,12,254	0/0:26,0:26:12.04:0,12,207	0/0:27,0:27:45.03:0,45,415	0/0:22,0:22:15.04:0,15,242	0/0:21,0:21:10.28:0,10,145	0/0:34,0:34:19.93:0,20,351	1/1:14,10:22:33.10:467,33,0	1/1:11,15:26:39.13:575,39,0	1/1:13,20:32:21.07:324,21,0	0/0:19,0:19:12:0,12,135	0/0:15,0:15:15.96:0,16,203	0/0:38,0:38:12.04:0,12,214	0/0:23,0:23:9.03:0,9,158	0/0:22,0:22:29.52:0,30,521	1/1:13,20:33:26.46:414,26,0	0/0:19,0:19:21.07:0,21,387
chr10	31828078	.	AC	A	916.92	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=0.031;DP=702;FS=1.604;HRun=2;HaplotypeScore=135.2347;InbreedingCoeff=0.9924;MQ=57.52;MQ0=10;MQRankSum=4.065;QD=33.96;ReadPosRankSum=2.350;VQSLOD=3.3531;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:66.20:0,66,917	0/0:12,0:12:36.10:0,36,495	0/0:28,0:15:40.61:0,41,569	0/0:27,0:16:45.05:0,45,580	0/0:24,0:23:60.20:0,60,868	0/0:24,0:24:69.23:0,69,1001	0/0:20,0:20:60.20:0,60,880	0/0:32,0:29:90.23:0,90,1195	0/0:20,0:20:60.19:0,60,858	0/0:20,0:20:57.19:0,57,825	0/0:14,0:14:21.07:0,21,296	0/0:25,0:25:45.62:0,46,641	0/0:28,0:28:36.09:0,36,502	0/0:24,0:24:27.04:0,27,395	1/1:0,27:27:78.25:1012,78,0	0/0:24,0:24:39.13:0,39,560	0/0:22,0:22:45.13:0,45,635	0/0:36,0:36:72.21:0,72,989	0/0:20,0:17:36.65:0,37,324	0/0:30,0:30:68.75:0,69,708	0/0:42,0:40:68.90:0,69,836	0/0:14,0:14:30.10:0,30,425	0/0:25,0:25:61.74:0,62,821	0/0:34,0:34:45.52:0,46,619	0/0:24,0:24:27.09:0,27,382	0/0:27,0:27:78.26:0,78,1091	0/0:25,0:25:30.34:0,30,249	0/0:15,0:15:42.14:0,42,612
chr10	31828718	.	CT	C	3833.52	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=11.268;DP=349;FS=15.523;HRun=1;HaplotypeScore=122.5708;InbreedingCoeff=0.9240;MQ=70.95;MQ0=2;MQRankSum=-10.579;QD=17.27;ReadPosRankSum=5.902;VQSLOD=2.6857;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,10:16:32.41:224,32,0	1/1:0,3:2:3:27,3,0	0/0:25,0:12:24.04:0,24,205	0/0:20,0:13:16.44:0,16,155	1/1:9,3:12:35.41:235,35,0	1/1:10,6:16:32.49:222,32,0	1/1:13,3:16:41.75:321,42,0	0/0:12,0:12:32.19:0,32,287	1/1:8,5:13:26.53:205,27,0	1/1:3,6:9:20.80:178,21,0	1/1:6,1:7:13.90:89,14,0	1/1:5,6:11:29.45:208,29,0	1/1:7,5:12:20.80:148,21,0	1/1:6,10:16:35.80:274,36,0	1/1:9,12:22:59.44:445,59,0	1/1:5,7:12:32.48:236,32,0	1/1:3,2:5:11.91:91,12,0	1/1:3,1:4:8.93:64,9,0	0/0:14,0:14:39.01:0,39,366	0/0:23,0:23:56.83:0,57,465	0/0:12,0:12:32.20:0,32,246	1/1:6,5:11:26.78:208,27,0	1/1:1,4:4:8.89:63,9,0	1/1:5,2:7:14.50:89,15,0	1/1:2,4:5:11.64:82,12,0	1/1:8,5:13:35.77:272,36,0	0/0:21,0:20:53.80:0,54,447	1/1:1,5:6:17.98:154,18,0
chr10	31828728	.	AAAAAAAAAAAAAAAATGCCTCAG	A	13044.90	PASS	AB=0.909;AC=35;AF=0.648;AN=54;BaseQRankSum=11.464;DP=302;FS=10.080;HRun=0;HaplotypeScore=178.7814;InbreedingCoeff=0.5032;MQ=62.58;MQ0=5;MQRankSum=-8.701;QD=96.63;ReadPosRankSum=11.934;VQSLOD=1.8061;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,10:10:21.07:944,21,0	1/1:3,0:2:3.01:135,3,0	0/0:33,0:9:26.88:0,27,798	0/0:22,0:14:37.01:0,37,1160	0/1:9,0:9:78.21:384,0,78	0/1:13,0:13:45.03:367,0,45	0/1:11,0:11:22.47:421,0,22	0/0:21,0:20:59.40:0,59,3430	0/1:11,0:11:15.35:393,0,15	1/1:0,6:6:18.06:970,18,0	1/1:1,1:2:6.02:307,6,0	1/1:0,6:6:15.05:790,15,0	0/1:1,5:6:99:468,0,121	1/1:0,10:10:21.07:1124,21,0	1/1:13,0:13:33.11:1928,33,0	1/1:0,7:7:18.06:952,18,0	1/1:0,2:2:6.02:323,6,0	./.	0/0:18,0:18:54.17:0,54,3033	0/0:24,0:24:72.25:0,72,4497	0/0:20,0:20:54.19:0,54,3762	1/1:0,5:5:15.05:804,15,0	1/1:0,4:3:9.03:342,9,0	1/1:0,2:2:6.02:307,6,0	1/1:1,4:4:9.03:469,9,0	1/1:1,4:5:15.05:809,15,0	0/0:28,0:26:78.27:0,78,5151	1/1:1,4:5:15.05:809,15,0
chr10	31828729	.	AAAAAAAAAAAAAAATGCCTCAG	A	12924.16	PASS	AB=1.000;AC=38;AF=0.704;AN=54;BaseQRankSum=11.331;DP=284;FS=6.778;HRun=0;HaplotypeScore=163.9524;InbreedingCoeff=0.7056;MQ=63.87;MQ0=5;MQRankSum=-9.233;QD=112.38;ReadPosRankSum=11.661;VQSLOD=2.5734;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:10,0:10:21.07:911,21,0	1/1:3,0:2:3.01:168,3,0	0/0:33,0:9:26.82:0,27,771	0/0:22,0:14:37.01:0,37,1124	0/1:5,0:5:8:492,0,8	1/1:8,0:8:8.88:466,9,0	1/1:5,0:5:12.04:571,12,0	0/0:21,0:20:59.23:0,59,3446	1/1:6,0:6:8.77:504,9,0	1/1:6,0:6:18.06:930,18,0	1/1:2,0:2:6.02:294,6,0	1/1:6,0:6:15.05:757,15,0	0/1:6,0:6:99:448,0,113	1/1:10,0:10:21.07:1077,21,0	1/1:1,12:13:33.06:1693,33,0	1/1:7,0:7:18.06:912,18,0	1/1:2,0:2:6.02:310,6,0	./.	0/0:19,0:19:57.20:0,57,3214	0/0:24,0:24:72.25:0,72,4228	0/0:20,0:20:54.19:0,54,3516	1/1:5,0:5:15.05:770,15,0	1/1:4,0:3:9.03:328,9,0	1/1:2,0:2:6.02:293,6,0	1/1:5,0:4:9.03:449,9,0	1/1:5,0:5:15.05:775,15,0	0/0:29,0:27:81.28:0,81,5010	1/1:5,0:5:15.05:776,15,0
chr10	31828730	.	AAAAAAAAAAAAAATGCCTCAG	A	12259.83	PASS	AB=1.000;AC=39;AF=0.722;AN=54;BaseQRankSum=11.560;DP=281;FS=6.750;HRun=0;HaplotypeScore=159.7305;InbreedingCoeff=0.7639;MQ=64.14;MQ0=5;MQRankSum=-9.217;QD=110.45;ReadPosRankSum=11.630;VQSLOD=2.4827;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,0:10:21.07:878,21,0	1/1:0,3:2:3.01:149,3,0	0/0:33,0:10:29.05:0,29,777	0/0:21,0:13:37:0,37,1061	1/1:0,3:3:9.03:444,9,0	1/1:2,5:7:9.03:455,9,0	1/1:2,3:5:12.04:494,12,0	0/0:21,0:20:59.01:0,59,3281	1/1:0,5:5:8.69:443,9,0	1/1:6,0:6:18.06:890,18,0	1/1:2,0:2:6.02:282,6,0	1/1:6,0:6:15.05:725,15,0	0/1:6,0:6:99:430,0,118	1/1:10,0:10:21.07:1032,21,0	1/1:13,0:13:32.86:1621,33,0	1/1:7,0:7:18.06:873,18,0	1/1:2,0:2:6.02:297,6,0	./.	0/0:20,0:20:60.21:0,60,3145	0/0:24,0:24:72.25:0,72,3939	0/0:20,0:20:54.19:0,54,3284	1/1:5,0:5:15.05:737,15,0	1/1:4,0:3:9.03:315,9,0	1/1:2,0:2:6.02:281,6,0	1/1:5,0:4:9.03:429,9,0	1/1:5,0:5:15.05:742,15,0	0/0:29,0:27:81.28:0,81,4703	1/1:5,0:5:15.05:742,15,0
chr10	31828743	.	ATGCCTCAG	A	8061.65	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=12.142;DP=322;FS=0.000;HRun=0;HaplotypeScore=134.2764;InbreedingCoeff=0.8598;MQ=69.81;MQ0=3;MQRankSum=-11.207;QD=47.42;ReadPosRankSum=7.744;VQSLOD=4.0889;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,4:14:24.08:540,24,0	1/1:3,1:3:3.01:65,3,0	0/0:30,0:16:17.29:0,17,1122	0/0:16,0:11:4.83:0,5,629	1/1:3,4:7:18.06:404,18,0	1/1:8,2:10:13.29:275,13,0	1/1:3,4:7:18.06:427,18,0	0/0:30,0:29:72.25:0,72,2683	1/1:6,4:10:20.90:505,21,0	1/1:6,5:11:30.10:697,30,0	1/1:2,2:4:12.04:247,12,0	1/1:6,3:9:18.06:385,18,0	1/1:6,3:9:12.04:270,12,0	1/1:10,1:11:24.08:526,24,0	1/1:13,5:18:42.14:943,42,0	1/1:7,1:8:21.07:450,21,0	1/1:2,3:5:11.99:225,12,0	1/1:1,2:3:3.01:78,3,0	0/0:25,0:25:60.20:0,60,2293	0/0:14,0:14:39.13:0,39,1487	0/0:16,0:16:33.11:0,33,1223	1/1:5,1:6:18.06:396,18,0	1/1:4,4:7:20.28:459,20,0	1/1:2,1:3:6.02:115,6,0	1/1:5,1:5:12.04:257,12,0	1/1:5,3:8:18.06:399,18,0	0/0:21,0:20:45.14:0,45,1606	1/1:5,4:9:18.06:399,18,0
chr10	31829003	.	AC	A	4045.86	PASS	AB=0.682;AC=21;AF=0.375;AN=56;BaseQRankSum=0.686;DP=539;FS=2.589;HRun=1;HaplotypeScore=213.5177;InbreedingCoeff=-0.3536;MQ=55.58;MQ0=2;MQRankSum=-5.322;QD=10.62;ReadPosRankSum=-0.465;VQSLOD=1.5386;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:18,12:29:21.44:278,0,21	0/1:1,5:6:2.73:75,0,3	0/0:29,1:28:77.05:0,77,1059	0/0:22,0:18:47.34:0,47,732	0/1:3,14:17:3.26:182,0,3	0/1:20,11:31:99:285,0,110	0/1:4,11:15:19.19:229,0,19	0/0:30,0:30:82.14:0,82,960	0/1:11,8:19:51.27:243,0,51	0/1:15,10:24:99:185,0,165	0/1:3,8:11:12.22:128,0,12	0/1:11,9:20:34.69:248,0,35	0/1:14,11:25:96.09:336,0,96	0/1:21,3:23:99:112,0,119	0/1:17,8:24:79.17:245,0,79	0/1:19,17:35:99:502,0,121	0/1:10,6:16:48.90:131,0,49	0/1:11,6:15:99:151,0,120	0/0:13,0:12:35.98:0,36,451	0/0:22,0:22:56.45:0,56,687	0/0:11,0:11:33.01:0,33,428	0/1:2,7:9:21.12:121,0,21	0/1:6,6:10:2.31:137,0,2	0/1:8,4:12:13.05:50,0,13	1/1:2,3:5:8.73:74,9,0	0/1:14,12:24:99:333,0,173	0/0:24,0:24:62.98:0,63,787	0/0:5,0:5:5.91:0,6,48
chr10	31829011	.	AC	A	1102.13	PASS	AB=0.963;AC=33;AF=0.589;AN=56;BaseQRankSum=5.331;DP=523;FS=0.882;HRun=1;HaplotypeScore=233.5533;InbreedingCoeff=0.3404;MQ=54.56;MQ0=3;MQRankSum=-9.321;QD=3.01;ReadPosRankSum=-0.666;VQSLOD=-0.6946;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:25,1:25:36.44:36,0,70	1/1:6,1:7:8.43:66,8,0	0/0:34,0:30:83.40:0,83,1052	0/0:22,1:19:39.87:0,40,611	1/1:16,1:17:10.88:75,11,0	1/1:29,0:29:22.86:120,23,0	1/1:13,0:13:9.84:86,10,0	0/0:27,2:29:70.42:0,70,908	1/1:16,0:16:22.56:117,23,0	1/1:23,0:22:21.04:98,21,0	0/1:10,0:10:7.53:14,0,8	0/1:21,0:21:4.65:77,0,5	0/1:22,0:22:14.83:40,0,15	0/1:23,1:23:7.58:51,0,8	1/1:19,5:23:19.27:146,19,0	0/1:32,0:31:15.55:39,0,16	0/1:16,1:17:12.90:51,0,13	1/1:15,2:15:4.36:53,4,0	0/0:16,0:15:42.61:0,43,497	0/0:21,1:22:53.42:0,53,716	0/0:12,0:11:29.54:0,30,338	1/1:8,0:8:2.51:29,3,0	1/1:8,1:7:3.20:29,3,0	0/1:11,1:12:0.50:29,0,1	0/1:6,1:6:1.59:10,0,2	1/1:27,0:25:24.78:115,25,0	0/0:20,1:21:32.22:0,32,649	1/1:5,0:5:2.13:5,2,0
chr10	31829013	.	A	AAC	2553.76	PASS	AB=0.771;AC=24;AF=0.429;AN=56;BaseQRankSum=12.095;DP=512;FS=46.035;HRun=0;HaplotypeScore=233.6538;InbreedingCoeff=-0.2877;MQ=52.85;MQ0=3;MQRankSum=-10.402;QD=7.13;ReadPosRankSum=6.602;VQSLOD=1.4781;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:19,7:25:99:197,0,141	1/1:5,1:6:5.62:67,6,0	0/0:29,0:27:59.25:0,59,937	0/0:23,0:18:40.97:0,41,575	0/1:12,3:15:39.37:104,0,39	0/1:14,15:29:18.90:256,0,19	0/1:9,4:13:9.32:120,0,9	0/0:28,0:28:75.56:0,76,999	0/1:11,4:15:64.82:113,0,65	0/1:18,4:21:65.09:65,0,161	0/1:7,2:9:27.25:27,0,38	0/1:14,7:21:99:184,0,121	0/1:17,6:23:86.98:87,0,292	0/1:12,12:23:65.77:216,0,66	1/1:12,12:23:41.07:306,41,0	0/1:19,13:31:99:193,0,326	0/1:11,5:16:99:129,0,100	0/1:11,7:16:43.61:273,0,44	0/0:17,0:16:41.48:0,41,520	0/0:22,0:22:54.01:0,54,709	0/0:11,0:10:26.75:0,27,340	0/1:6,1:7:13.51:14,0,38	0/1:5,3:6:5.12:23,0,5	0/1:7,5:12:8.17:66,0,8	0/1:5,1:5:4.26:4,0,27	0/1:21,6:25:99:227,0,138	0/0:22,0:22:53.92:0,54,675	1/1:0,5:5:6:51,6,0
chr10	31829016	.	CA	C	1804.27	PASS	AB=0.760;AC=26;AF=0.464;AN=56;BaseQRankSum=11.560;DP=504;FS=0.000;HRun=3;HaplotypeScore=224.3387;InbreedingCoeff=-0.1301;MQ=52.96;MQ0=3;MQRankSum=-10.746;QD=5.24;ReadPosRankSum=7.078;VQSLOD=-0.1680;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:18,7:25:99:131,0,105	1/1:5,1:6:5.57:36,6,0	0/0:30,0:26:56.97:0,57,640	0/0:23,0:19:35.91:0,36,462	0/1:12,3:15:15.16:31,0,15	0/1:13,15:28:11.36:108,0,11	0/1:8,4:12:12.22:62,0,12	0/0:14,0:30:48.86:0,49,295	0/1:11,4:15:7.02:143,0,7	0/1:16,4:19:21.86:188,0,22	0/1:5,2:7:12.02:15,0,12	0/1:13,7:20:99:110,0,100	0/1:15,6:21:99:121,0,117	0/1:10,12:21:3.38:154,0,3	1/1:12,12:23:39.49:183,39,0	0/1:19,13:31:99:121,0,203	0/1:11,5:16:28.23:97,0,28	0/1:11,7:16:38.52:141,0,39	0/0:7,0:19:41.60:0,42,232	0/0:12,0:23:41.63:0,42,232	0/0:9,0:10:11.13:0,11,51	1/1:5,1:6:7.04:39,7,0	0/1:4,3:5:4.77:5,0,21	1/1:6,5:11:9.53:66,10,0	0/1:5,1:5:13.88:19,0,14	0/1:21,6:25:67.70:175,0,68	0/0:17,0:22:39.48:0,39,242	1/1:0,5:5:5.87:36,6,0
chr10	31829017	.	A	AAC	6224.64	PASS	AB=0.945;AC=24;AF=0.429;AN=56;BaseQRankSum=8.302;DP=525;FS=49.321;HRun=0;HaplotypeScore=235.9289;InbreedingCoeff=-0.1178;MQ=52.90;MQ0=3;MQRankSum=-8.930;QD=17.44;ReadPosRankSum=6.129;VQSLOD=3.1524;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:24,2:25:99:371,0,111	1/1:4,1:5:6.02:98,6,0	0/0:30,0:26:57.06:0,57,701	0/0:24,0:19:35.49:0,35,498	0/1:14,2:16:3.62:224,0,4	1/1:32,0:32:34.13:696,34,0	0/1:13,1:14:12.33:321,0,12	0/0:33,0:33:41.15:0,41,284	0/1:16,1:17:5.01:278,0,5	0/1:21,0:20:50.92:226,0,51	0/1:7,0:7:15.43:89,0,15	0/1:18,2:20:99:375,0,108	0/1:23,1:24:99:273,0,212	0/1:23,1:23:20.92:516,0,21	1/1:25,0:24:24.84:518,25,0	0/1:32,0:31:99:566,0,249	0/1:16,2:18:72.13:288,0,72	0/1:17,3:18:21.44:590,0,21	0/0:20,0:19:20.06:0,20,195	0/0:23,0:23:24.09:0,24,215	0/0:11,0:10:21.49:0,21,136	0/1:5,0:5:15.09:43,0,15	0/1:7,0:5:4.79:53,0,5	0/1:10,1:11:6.33:117,0,6	0/0:4,2:5:7.98:0,8,41	0/1:25,3:26:59.39:482,0,59	0/0:21,0:21:34.10:0,34,212	1/1:5,0:5:6.02:102,6,0
chr10	31829019	.	AC	A	2793.60	PASS	AB=1.000;AC=47;AF=0.839;AN=56;BaseQRankSum=0.855;DP=509;FS=5.470;HRun=1;HaplotypeScore=225.4720;InbreedingCoeff=0.2377;MQ=51.79;MQ0=3;MQRankSum=-4.448;QD=6.05;ReadPosRankSum=-0.773;VQSLOD=0.1140;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:26:31.26:77,0,31	1/1:5,0:5:2.46:11,2,0	0/0:27,0:23:56.37:0,56,497	0/0:20,0:16:29.09:0,29,327	1/1:13,0:13:7.85:33,8,0	1/1:32,0:32:30.93:138,31,0	1/1:15,0:15:22.40:101,22,0	1/1:34,1:35:84.07:614,84,0	1/1:16,0:16:15.92:103,16,0	1/1:21,0:20:17.88:75,18,0	1/1:8,0:8:2.08:12,2,0	0/1:18,0:18:9.14:41,0,9	0/1:22,0:23:13.97:14,0,34	1/1:24,0:23:9.26:68,9,0	1/1:25,0:24:28.45:177,28,0	0/1:31,0:30:7.83:8,0,50	0/1:17,0:17:3.78:53,0,4	1/1:20,0:18:1.66:56,2,0	1/1:17,2:18:44.21:287,44,0	1/1:20,1:21:52.06:347,52,0	1/1:11,0:10:29.20:217,29,0	1/1:5,0:5:4.78:15,5,0	1/1:7,0:5:0.45:10,0,0	1/1:11,0:11:9.64:51,10,0	1/1:6,0:5:3.07:22,3,0	1/1:27,0:25:29.68:115,30,0	1/1:20,0:20:38.43:290,38,0	1/1:5,0:5:3.06:7,3,0
chr10	31829022	.	A	AC	1791.72	PASS	AB=0.958;AC=32;AF=0.571;AN=56;BaseQRankSum=11.569;DP=516;FS=40.282;HRun=0;HaplotypeScore=228.1338;InbreedingCoeff=-0.1766;MQ=56.33;MQ0=3;MQRankSum=-6.854;QD=4.23;ReadPosRankSum=10.130;VQSLOD=1.3153;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:26,2:27:7.17:162,7,0	1/1:5,1:5:5.84:41,6,0	0/0:28,0:24:63.09:0,63,727	0/0:21,0:17:29.81:0,30,390	1/1:11,2:13:6.14:47,6,0	0/1:31,1:32:4.57:168,0,5	1/1:14,1:15:8.06:90,8,0	0/0:33,0:33:6.38:0,6,262	0/1:16,1:17:26.04:67,0,26	0/1:21,0:20:46.62:47,0,83	1/1:8,0:8:8.62:41,9,0	0/1:14,2:16:19.32:119,0,19	0/1:22,1:23:58.38:58,0,166	0/1:22,1:23:26.01:146,0,26	0/1:25,0:24:15.50:113,0,16	0/1:33,0:32:99:153,0,129	0/1:16,2:18:25.43:93,0,25	1/1:17,3:18:19.01:220,19,0	0/1:19,0:18:31.92:32,0,106	0/1:22,0:22:6.74:7,0,186	0/0:10,0:9:5.68:0,6,73	0/1:5,0:5:11.11:17,0,11	1/1:8,0:5:7.21:30,7,0	0/1:10,1:11:2.39:68,0,2	0/1:7,1:6:11.27:13,0,11	0/1:24,3:25:37.16:177,0,37	0/1:21,0:21:3.21:3,0,182	1/1:5,0:5:5.97:46,6,0
chr10	31829025	.	A	ATC	1236.25	PASS	AB=0.863;AC=15;AF=0.268;AN=56;BaseQRankSum=-0.960;DP=509;FS=64.569;HRun=0;HaplotypeScore=246.6783;InbreedingCoeff=-0.2413;MQ=60.49;MQ0=3;MQRankSum=-6.978;QD=4.42;ReadPosRankSum=3.726;VQSLOD=0.9581;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:24,3:27:99:136,0,163	0/0:6,0:5:5.50:0,6,38	0/0:26,0:23:60.07:0,60,863	0/0:22,0:18:36.12:0,36,568	0/0:13,0:13:14.01:0,14,79	0/1:27,5:32:24.40:24,0,418	0/0:15,0:15:19.75:0,20,228	0/0:31,0:31:84.99:0,85,906	0/1:13,4:17:99:122,0,183	0/1:10,10:20:99:305,0,142	0/1:8,0:8:21.77:22,0,57	0/1:13,3:16:20.59:21,0,211	0/1:19,4:23:99:119,0,253	0/1:19,4:23:52.03:52,0,314	0/1:22,3:24:99:184,0,243	0/1:30,3:32:38.49:38,0,485	0/1:17,1:18:99:112,0,170	0/0:20,0:18:36.90:0,37,315	0/0:20,0:19:48.56:0,49,540	0/0:21,0:21:62.41:0,62,678	0/0:9,0:8:24.03:0,24,252	0/1:4,1:5:19.45:66,0,19	0/0:7,0:4:7.26:0,7,44	0/0:9,2:11:7.78:0,8,52	1/1:6,1:5:5.89:36,6,0	0/1:21,5:24:99:155,0,298	0/0:22,0:22:60.09:0,60,726	0/0:5,0:5:5.99:0,6,49
chr10	31829026	.	A	AACC	5748.13	PASS	AB=0.753;AC=35;AF=0.625;AN=56;BaseQRankSum=12.982;DP=505;FS=30.247;HRun=0;HaplotypeScore=242.8156;InbreedingCoeff=0.4388;MQ=62.67;MQ0=3;MQRankSum=-13.619;QD=16.24;ReadPosRankSum=8.909;VQSLOD=2.9684;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:24,4:28:17.50:397,18,0	1/1:5,1:5:6.02:70,6,0	0/0:28,0:24:60.12:0,60,917	0/0:23,0:19:35.95:0,36,582	1/1:10,3:13:16.78:155,17,0	1/1:14,18:32:0.02:438,0,0	1/1:6,9:15:7.72:323,8,0	0/0:32,0:32:86.48:0,86,693	0/1:12,5:17:29.60:183,0,30	0/1:15,5:20:56.38:195,0,56	1/1:5,3:8:13.17:113,13,0	1/1:9,6:16:18.13:333,18,0	0/1:13,9:22:36.13:309,0,36	1/1:8,14:22:10.83:414,11,0	1/1:10,13:24:23.08:372,23,0	1/1:20,13:32:50.97:764,51,0	1/1:9,7:17:21.22:353,21,0	1/1:10,10:18:45.41:583,45,0	0/0:18,0:18:52.76:0,53,407	0/0:20,0:20:56.08:0,56,431	0/0:8,0:7:17.77:0,18,128	0/1:4,1:5:12.44:44,0,12	1/1:4,3:4:8.59:59,9,0	0/1:6,5:11:7.19:85,0,7	0/1:4,2:5:2.39:3,0,2	0/1:18,8:24:8.14:472,0,8	0/0:22,0:22:62.27:0,62,575	1/1:0,5:5:6.02:84,6,0
chr10	31829027	.	A	AC	1462.54	PASS	AB=0.877;AC=25;AF=0.446;AN=56;BaseQRankSum=-1.013;DP=489;FS=0.427;HRun=0;HaplotypeScore=219.1983;InbreedingCoeff=-0.1295;MQ=64.75;MQ0=3;MQRankSum=-5.552;QD=4.39;ReadPosRankSum=2.634;VQSLOD=3.2066;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:18,8:26:4.59:207,0,5	0/0:3,3:5:0.55:0,1,6	0/0:29,0:25:66.04:0,66,769	0/0:23,0:19:38.79:0,39,455	0/0:10,3:13:12:0,12,41	0/1:27,5:32:64.06:142,0,64	0/1:13,2:15:9.13:9,0,29	0/0:32,0:32:12.91:0,13,282	0/1:13,3:16:2.72:132,0,3	1/1:15,4:19:12.70:185,13,0	0/1:4,4:8:3.62:50,0,4	0/1:14,2:16:36.99:63,0,37	0/1:15,1:17:28.06:28,0,41	0/1:20,1:21:21.55:22,0,49	0/0:24,0:24:2.74:0,3,68	0/1:19,6:25:47.33:206,0,47	0/1:13,3:16:14.40:71,0,14	0/1:17,2:17:3.19:106,0,3	0/1:20,0:20:30.78:31,0,106	0/1:20,0:20:11.16:11,0,160	0/1:8,0:7:3.22:3,0,3	1/1:2,3:5:0.60:17,1,0	1/1:5,2:4:1.85:70,2,0	0/1:9,2:11:1.43:1,0,13	1/1:6,1:5:5.27:20,5,0	1/1:19,6:23:3.25:235,3,0	0/0:24,0:24:0:0,0,216	0/0:5,0:5:1.24:0,1,3
chr10	31829029	.	ACTG	A	6637.24	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=14.594;DP=479;FS=7.997;HRun=0;HaplotypeScore=213.9357;InbreedingCoeff=0.8997;MQ=64.21;MQ0=3;MQRankSum=-14.977;QD=20.36;ReadPosRankSum=11.304;VQSLOD=2.7199;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,12:25:47.57:418,48,0	1/1:5,1:5:5.99:55,6,0	0/0:26,0:23:68.69:0,69,1263	0/0:24,0:19:41.96:0,42,915	1/1:10,4:14:20.56:199,21,0	1/1:13,19:32:66.06:638,66,0	1/1:4,10:14:38.19:326,38,0	0/0:30,0:30:6.29:0,6,1243	1/1:10,6:16:39.59:319,40,0	1/1:14,5:19:47.64:374,48,0	1/1:5,3:8:17.98:187,18,0	1/1:8,7:15:38.55:350,39,0	1/1:7,9:16:37.30:279,37,0	1/1:6,15:21:50.24:420,50,0	1/1:4,19:23:55.70:468,56,0	1/1:11,13:24:70.83:616,71,0	1/1:6,9:15:38.70:373,39,0	1/1:8,10:17:48.13:562,48,0	0/0:19,0:20:33.34:0,33,877	0/0:19,0:20:57.19:0,57,1007	0/0:9,0:8:23.97:0,24,405	1/1:4,1:5:8.50:64,9,0	1/1:4,3:4:8.98:74,9,0	1/1:5,5:10:16.38:164,16,0	1/1:4,3:5:5.81:52,6,0	1/1:16,9:24:65.66:635,66,0	0/0:24,0:24:44.02:0,44,1215	1/1:0,5:5:6.02:66,6,0
chr10	31829030	.	CTG	C	4795.11	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=15.230;DP=472;FS=5.542;HRun=0;HaplotypeScore=211.9267;InbreedingCoeff=0.9155;MQ=64.44;MQ0=3;MQRankSum=-15.169;QD=14.85;ReadPosRankSum=11.562;VQSLOD=3.2042;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:20,3:25:46.25:278,46,0	1/1:4,0:5:5.72:32,6,0	0/0:25,0:23:69.12:0,69,1168	0/0:23,0:19:41.50:0,41,826	1/1:9,0:11:16.80:81,17,0	1/1:25,5:31:63.25:394,63,0	1/1:13,0:14:33.40:174,33,0	0/0:27,0:27:75.24:0,75,1434	1/1:9,4:16:39.02:276,39,0	1/1:9,10:19:48.95:467,49,0	1/1:8,0:9:17.21:102,17,0	1/1:9,3:15:36.94:222,37,0	1/1:12,4:17:40.14:297,40,0	1/1:16,4:21:46.34:279,46,0	1/1:19,3:23:53.62:342,54,0	1/1:19,3:24:69.32:432,69,0	1/1:12,1:15:37.72:244,38,0	1/1:13,0:17:47.59:363,48,0	0/0:19,0:19:56.67:0,57,1014	0/0:20,0:20:57.19:0,57,1049	0/0:9,0:8:24.08:0,24,440	1/1:4,1:5:8.71:64,9,0	1/1:5,0:4:8.68:53,9,0	1/1:8,2:11:16.86:92,17,0	1/1:4,1:5:5.82:35,6,0	1/1:15,4:23:65.17:527,65,0	0/0:24,0:24:65.96:0,66,1264	1/1:5,0:5:5.94:41,6,0
chr10	31829381	.	CT	C	987	PASS	AB=0.839;AC=38;AF=0.679;AN=56;BaseQRankSum=10.785;DP=323;FS=143.252;HRun=1;HaplotypeScore=71.4174;InbreedingCoeff=0.5986;MQ=64.39;MQ0=7;MQRankSum=-9.667;QD=9.87;ReadPosRankSum=3.790;VQSLOD=0.3296;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,4:9:14.89:113,15,0	1/1:1,0:1:3:25,3,0	0/0:16,0:15:45.05:0,45,641	0/0:18,0:17:47.97:0,48,661	1/1:1,1:2:3:25,3,0	1/1:5,0:5:8.42:52,8,0	1/1:5,1:5:5.97:45,6,0	0/0:40,0:32:93.31:0,93,1463	1/1:4,3:7:6:60,6,0	1/1:5,1:6:12:109,12,0	1/1:1,0:1:2.96:19,3,0	0/1:8,1:9:0.91:37,0,1	1/1:5,0:5:8.88:62,9,0	1/1:9,1:10:11.96:95,12,0	1/1:4,2:6:11.18:77,11,0	1/1:6,3:9:11.99:102,12,0	0/0:4,0:2:3:0,3,29	0/1:5,2:7:18.59:55,0,19	0/0:32,0:31:88.29:0,88,1297	0/0:18,0:18:46.39:0,46,700	0/0:78,0:75:99:0,214,3116	1/1:5,1:6:14.94:117,15,0	1/1:1,0:1:3:26,3,0	1/1:1,1:2:2.97:20,3,0	1/1:2,0:2:3:25,3,0	1/1:4,0:4:6.01:57,6,0	0/0:17,0:13:39.13:0,39,607	1/1:2,0:2:6:53,6,0
chr10	31829383	.	G	GAGCCCC	5123.09	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=10.909;DP=317;FS=143.499;HRun=0;HaplotypeScore=79.4026;InbreedingCoeff=0.6816;MQ=63.17;MQ0=7;MQRankSum=-10.058;QD=47.00;ReadPosRankSum=3.499;VQSLOD=1.9082;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,5:10:15.05:402,15,0	1/1:0,1:1:3.01:110,3,0	0/0:14,0:14:42.08:0,42,902	0/0:18,0:17:36.14:0,36,950	1/1:1,1:2:3.01:109,3,0	1/1:0,5:5:9.03:315,9,0	1/1:1,5:5:6.02:148,6,0	0/0:30,0:29:84.27:0,84,2004	1/1:3,4:7:6.02:163,6,0	1/1:2,5:7:12.04:439,12,0	1/1:0,1:1:3.01:107,3,0	1/1:2,7:9:9.03:307,9,0	1/1:0,5:5:9.03:320,9,0	1/1:1,9:10:12.04:432,12,0	1/1:3,3:6:12.04:350,12,0	1/1:3,6:9:12.04:438,12,0	1/1:0,2:2:3.01:36,3,0	1/1:4,4:8:9.03:205,9,0	0/0:24,0:26:78.23:0,78,1706	0/0:15,0:17:48.16:0,48,1168	0/0:66,0:76:99:0,226,5091	1/1:1,5:6:15.05:547,15,0	1/1:0,1:1:3.01:110,3,0	1/1:2,0:2:3.01:38,3,0	1/1:2,2:4:3.01:109,3,0	1/1:0,4:4:6.02:220,6,0	0/0:13,0:13:39.13:0,39,999	1/1:0,2:2:6.02:219,6,0
chr10	31829484	.	C	CCT	766.32	PASS	AB=0.875;AC=20;AF=0.625;AN=32;BaseQRankSum=5.963;DP=371;FS=31.737;HRun=0;HaplotypeScore=44.1347;InbreedingCoeff=0.4518;MQ=56.30;MQ0=28;MQRankSum=-6.922;QD=5.68;ReadPosRankSum=-1.964;VQSLOD=0.5237;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:32,0:9:17.73:0,18,187	0/0:34,0:13:26.46:0,26,288	1/1:2,7:6:6.02:101,6,0	1/1:2,3:3:3.01:51,3,0	1/1:2,1:2:3.01:49,3,0	0/0:33,2:33:86.92:0,87,1056	./.	1/1:8,5:10:3.01:50,3,0	./.	1/1:1,2:2:3:27,3,0	./.	./.	./.	./.	./.	1/1:2,1:2:3.01:51,3,0	0/1:26,2:22:55.98:56,0,455	0/0:25,0:25:72.23:0,72,925	0/0:61,0:60:99:0,144,1834	1/1:0,8:6:3.01:51,3,0	./.	./.	1/1:5,10:14:12.04:187,12,0	1/1:6,5:6:12.04:201,12,0	0/1:24,7:28:75.45:75,0,770	./.
chr10	31829847	.	TC	T	1715.29	PASS	AC=36;AF=0.720;AN=50;BaseQRankSum=13.069;DP=289;FS=181.438;HRun=1;HaplotypeScore=75.5246;InbreedingCoeff=0.8711;MQ=79.73;MQ0=4;MQRankSum=-12.801;QD=18.06;ReadPosRankSum=2.224;VQSLOD=-0.7645;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,3:3:5.97:46,6,0	1/1:0,2:2:5.97:45,6,0	0/0:28,0:22:51.22:0,51,816	0/0:12,0:12:29.93:0,30,445	1/1:0,6:5:14.89:108,15,0	1/1:0,8:8:23.86:177,24,0	1/1:0,5:5:11.90:84,12,0	0/0:34,0:34:99:0,102,1562	1/1:0,5:5:14.92:112,15,0	1/1:0,5:4:11.94:91,12,0	1/1:0,6:3:8.94:66,9,0	1/1:1,5:6:17.88:132,18,0	1/1:0,5:5:14.92:112,15,0	1/1:1,2:3:8.94:66,9,0	1/1:0,12:12:35.80:268,36,0	1/1:1,3:4:11.94:89,12,0	1/1:0,2:2:5.97:45,6,0	1/1:0,3:3:8.98:73,9,0	0/0:23,0:22:66.19:0,66,1007	0/0:32,0:32:96.31:0,96,1511	0/0:26,0:26:78.24:0,78,1198	./.	1/1:0,3:3:8.92:62,9,0	1/1:0,6:6:17.85:128,18,0	./.	1/1:0,10:9:26.87:203,27,0	0/0:37,0:36:99:0,111,1766	./.
chr10	31829851	.	TG	T	1532.21	PASS	AC=36;AF=0.720;AN=50;BaseQRankSum=12.616;DP=284;FS=159.994;HRun=1;HaplotypeScore=77.8333;InbreedingCoeff=0.8313;MQ=81.56;MQ0=1;MQRankSum=-12.654;QD=15.48;ReadPosRankSum=2.754;VQSLOD=-0.3703;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,3:2:5.97:45,6,0	1/1:0,2:2:5.97:45,6,0	0/0:24,0:21:57.09:0,57,827	0/0:12,0:12:30.07:0,30,451	1/1:1,6:6:14.89:108,15,0	1/1:0,8:8:17.91:135,18,0	1/1:1,5:6:5.97:45,6,0	0/0:32,0:32:96.31:0,96,1509	1/1:0,5:5:14.92:112,15,0	1/1:2,5:6:15.38:112,15,0	1/1:0,6:3:8.94:65,9,0	1/1:0,5:5:14.91:111,15,0	1/1:0,5:5:11.94:91,12,0	1/1:0,2:2:5.97:45,6,0	1/1:0,12:12:35.81:268,36,0	1/1:1,3:4:8.96:68,9,0	1/1:2,2:4:8.93:64,9,0	1/1:1,3:4:8.98:73,9,0	0/0:21,0:20:60.19:0,60,937	0/0:32,0:32:96.31:0,96,1511	0/0:24,0:24:72.22:0,72,1124	./.	1/1:0,3:3:2.98:22,3,0	1/1:0,6:6:14.89:107,15,0	./.	1/1:0,10:9:26.87:203,27,0	0/0:38,0:38:99:0,114,1792	./.
chr10	31830236	.	G	GC	1957.17	PASS	AB=0.871;AC=27;AF=0.482;AN=56;BaseQRankSum=13.945;DP=646;FS=0.414;HRun=0;HaplotypeScore=236.0345;InbreedingCoeff=0.0196;MQ=44.58;MQ0=49;MQRankSum=-9.156;QD=4.55;ReadPosRankSum=6.104;VQSLOD=2.7293;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:29,1:19:23.59:53,0,24	0/1:7,1:8:30.36:30,0,49	0/0:28,0:21:57.17:0,57,779	0/0:22,0:11:27.09:0,27,375	0/1:18,5:23:34:121,0,34	0/1:27,2:24:24.50:71,0,25	0/1:20,0:16:8.30:8,0,90	0/0:31,0:26:75.24:0,75,1031	1/1:17,4:15:3.64:116,4,0	1/1:33,4:30:19.75:314,20,0	0/1:19,3:21:0.93:77,0,1	0/1:20,10:24:36.08:186,0,36	1/1:19,5:20:29.85:240,30,0	0/1:22,10:24:4.47:174,0,4	0/1:21,5:24:35.34:138,0,35	0/1:18,7:17:30.76:103,0,31	0/0:7,0:5:0.47:0,0,1	0/1:9,2:9:7.37:82,0,7	0/0:21,0:19:54.10:0,54,699	0/0:35,0:34:93.22:0,93,1258	0/0:39,0:28:75.25:0,75,1045	0/1:14,2:16:26.86:27,0,34	1/1:11,1:12:8.64:55,9,0	1/1:11,3:11:2.10:67,2,0	1/1:12,3:13:0.89:66,1,0	0/1:27,1:27:50.49:131,0,50	0/0:33,0:33:93.29:0,93,1277	1/1:7,0:7:8.48:70,8,0
chr10	31830237	.	T	TGGGTTACATGGCAGCCAGGGC	48260.91	PASS	AB=0.905;AC=37;AF=0.661;AN=56;BaseQRankSum=12.676;DP=652;FS=3.043;HRun=0;HaplotypeScore=314.3834;InbreedingCoeff=0.5333;MQ=44.43;MQ0=52;MQRankSum=-14.340;QD=109.44;ReadPosRankSum=4.630;VQSLOD=4.2426;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:28,1:18:35.48:2242,35,0	0/1:7,1:8:99:997,0,161	0/0:28,0:22:63.19:0,63,2679	0/0:22,0:12:30.06:0,30,1239	0/1:17,5:22:99:2073,0,167	1/1:27,2:24:30.29:2834,30,0	0/1:20,0:16:99:1167,0,118	0/0:32,0:27:75.22:0,75,3556	1/1:19,4:17:30.06:2357,30,0	1/1:33,4:30:39.92:3451,40,0	1/1:19,3:21:8.47:1991,8,0	1/1:21,10:23:38.86:4103,39,0	1/1:18,5:19:57.20:4553,57,0	1/1:22,10:24:63.21:4596,63,0	1/1:21,4:24:47.65:3760,48,0	1/1:18,7:17:38.63:3182,39,0	1/1:8,0:5:3.01:177,3,0	0/1:10,2:9:15.72:1190,0,16	0/0:22,0:20:57.07:0,57,2075	0/0:35,0:34:93.72:0,94,4610	0/0:39,0:28:78.22:0,78,3879	1/1:15,2:17:1.74:1603,2,0	1/1:11,1:12:14.54:961,15,0	1/1:12,3:11:11.61:2096,12,0	1/1:12,3:13:10.68:1811,11,0	0/1:27,1:27:16.50:1603,0,16	0/0:33,0:33:93.06:0,93,4944	1/1:7,0:7:21.07:1513,21,0
chr10	31830483	.	G	GT	9781.23	PASS	AB=0.702;AC=15;AF=0.268;AN=56;BaseQRankSum=-9.432;DP=1361;FS=15.400;HRun=2;HaplotypeScore=212.2049;InbreedingCoeff=-0.3659;MQ=48.20;MQ0=38;MQRankSum=-3.350;QD=13.64;ReadPosRankSum=0.181;VQSLOD=2.4253;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:39,45:84:99:1384,0,924	0/0:15,0:12:36.04:0,36,412	0/0:24,0:21:57.14:0,57,677	0/0:32,0:30:78.15:0,78,894	0/0:36,0:29:78.02:0,78,906	0/0:41,0:37:92.83:0,93,1000	0/0:46,0:43:99:0,129,1539	0/0:66,0:66:99:0,184,2205	0/0:49,0:49:99:0,135,1597	0/1:29,18:43:99:496,0,694	0/1:22,8:29:84.96:85,0,464	0/1:32,36:68:99:1099,0,836	0/1:26,25:51:99:908,0,674	0/1:46,38:82:99:1160,0,1130	0/0:79,0:79:99:0,207,2446	0/1:29,26:55:99:888,0,802	0/1:28,27:54:99:831,0,687	0/1:12,26:38:99:813,0,262	0/0:60,0:60:99:0,159,1970	0/0:30,0:27:78.24:0,78,965	0/0:110,0:108:99:0,310,3766	0/1:23,6:29:99:159,0,530	0/1:21,7:25:37.08:37,0,602	0/1:22,25:47:99:854,0,525	0/1:18,5:19:41.09:41,0,438	0/1:35,18:53:99:610,0,1004	0/0:56,0:55:99:0,159,1901	0/1:8,13:19:99:417,0,221
chr10	31830602	.	C	CT	7656.17	PASS	AB=0.678;AC=22;AF=0.407;AN=54;BaseQRankSum=9.205;DP=797;FS=10.567;HRun=1;HaplotypeScore=150.8527;InbreedingCoeff=-0.4415;MQ=35.61;MQ0=111;MQRankSum=-8.537;QD=14.15;ReadPosRankSum=2.043;VQSLOD=3.5860;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:29,11:37:99:162,0,721	1/1:1,7:3:9.03:134,9,0	./.	0/0:24,0:2:2.98:0,3,21	1/1:2,7:6:6.02:90,6,0	0/1:7,11:16:83.50:326,0,83	0/1:14,11:22:99:227,0,265	0/0:42,0:34:99:0,99,1240	0/1:16,22:37:99:665,0,337	0/1:11,24:28:99:678,0,236	0/1:10,6:10:26.79:110,0,27	0/1:18,25:39:99:878,0,435	0/1:18,16:32:99:629,0,376	0/1:18,25:41:99:753,0,487	0/1:16,27:41:99:940,0,318	0/1:18,17:33:99:535,0,495	0/1:16,5:19:8.74:9,0,374	0/1:12,5:16:67.02:67,0,278	0/0:39,0:31:84.24:0,84,1060	0/0:37,0:34:71.91:0,72,892	0/0:52,0:47:54.14:0,54,670	0/1:13,15:20:99:350,0,185	0/1:10,12:15:99:243,0,119	0/1:14,8:22:99:146,0,239	0/1:8,12:14:99:274,0,122	0/1:12,11:22:99:441,0,272	0/0:28,0:25:72.14:0,72,881	0/0:1,2:1:3.01:0,3,39
chr10	31830683	.	AGG	A	7128.81	PASS	AB=0.609;AC=25;AF=0.446;AN=56;BaseQRankSum=2.525;DP=660;FS=92.174;HRun=3;HaplotypeScore=104.5361;InbreedingCoeff=-0.1623;MQ=34.40;MQ0=134;MQRankSum=-3.626;QD=15.98;ReadPosRankSum=2.020;VQSLOD=0.3733;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:12,17:21:99:147,0,305	1/1:1,9:7:11.97:183,12,0	0/0:25,0:1:3.01:0,3,45	0/0:32,0:3:8.98:0,9,134	1/1:4,23:16:12.04:181,12,0	0/1:10,12:20:99:407,0,342	1/1:3,8:8:20.93:264,21,0	0/0:18,0:13:39.12:0,39,714	0/1:5,12:16:99:261,0,198	0/1:6,19:19:99:664,0,116	1/1:3,11:6:5.97:92,6,0	0/1:16,16:30:99:549,0,685	0/1:11,16:26:99:401,0,569	0/1:14,19:31:99:645,0,499	0/1:13,22:35:99:862,0,552	0/1:10,23:31:99:825,0,284	0/1:5,10:9:99:134,0,152	0/1:2,5:5:99:122,0,101	0/0:27,0:23:66.23:0,66,1267	0/0:29,0:25:35.93:0,36,613	0/0:44,0:36:8.86:0,9,173	0/1:8,30:27:39.74:184,0,40	0/1:8,11:14:94.48:171,0,94	0/1:3,7:7:39.75:211,0,40	1/1:1,6:4:8.96:110,9,0	0/1:13,22:29:99:718,0,401	0/0:30,0:28:78.26:0,78,1459	0/0:3,6:7:9.03:0,9,173
chr10	31831646	.	GA	G	8094.76	PASS	AB=1.000;AC=43;AF=0.768;AN=56;BaseQRankSum=12.456;DP=601;FS=3.321;HRun=9;HaplotypeScore=74.6151;InbreedingCoeff=0.8864;MQ=56.79;MQ0=9;MQRankSum=2.333;QD=18.48;ReadPosRankSum=5.740;VQSLOD=5.0802;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,32:36:66.03:604,66,0	1/1:1,3:4:9:82,9,0	0/0:38,0:11:29.52:0,30,293	0/1:36,0:18:3.62:4,0,191	1/1:2,31:33:69.03:630,69,0	1/1:2,18:20:48.03:439,48,0	1/1:3,21:24:42.02:383,42,0	0/0:28,0:28:69.18:0,69,771	1/1:0,14:14:33.02:301,33,0	1/1:1,17:18:51.03:467,51,0	1/1:1,26:27:63.02:575,63,0	1/1:0,18:18:45.02:412,45,0	1/1:1,14:15:30.01:275,30,0	1/1:0,19:19:36.02:329,36,0	1/1:3,16:19:33.01:302,33,0	1/1:0,12:12:27.01:247,27,0	1/1:1,28:29:66.04:604,66,0	1/1:2,10:12:27.01:247,27,0	0/0:25,0:25:69.18:0,69,784	0/0:31,0:31:90.27:0,90,1036	0/0:12,0:12:36.09:0,36,403	1/1:1,5:6:15.01:137,15,0	1/1:1,14:15:36.02:329,36,0	1/1:2,28:30:69.03:630,69,0	1/1:1,24:25:51.03:467,51,0	1/1:0,22:22:66.04:604,66,0	0/0:29,0:27:81.23:0,81,926	1/1:1,3:4:3:27,3,0
chr10	31832075	.	TACACAC	T	1697.57	PASS	AB=0.905;AC=39;AF=0.848;AN=46;BaseQRankSum=0.411;DP=518;FS=13.868;HRun=0;HaplotypeScore=140.1045;InbreedingCoeff=-0.1173;MQ=57.32;MQ0=28;MQRankSum=-1.742;QD=4.16;ReadPosRankSum=-0.359;VQSLOD=1.9280;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:23:2.72:40,3,0	1/1:3,0:6:6.02:84,6,0	./.	./.	0/1:24,0:23:0:1,0,0	1/1:21,0:20:1.91:7,2,0	0/1:17,0:18:0:0,0,0	./.	1/1:7,0:13:4.17:80,4,0	1/1:12,0:13:8.15:105,8,0	0/1:15,3:17:10.84:31,0,11	1/1:15,3:17:3.01:60,3,0	1/1:15,5:19:5.77:120,6,0	0/1:12,4:14:39.67:105,0,40	1/1:9,0:19:12.04:167,12,0	1/1:10,2:12:3.01:60,3,0	0/1:18,0:18:57.91:58,0,82	1/1:9,4:12:1.17:57,1,0	./.	1/1:15,0:21:11.93:167,12,0	./.	1/1:13,0:13:8.18:61,8,0	1/1:18,0:18:3.77:49,4,0	1/1:16,3:17:3.89:62,4,0	1/1:15,3:14:6.02:112,6,0	0/1:12,0:14:24.65:84,0,25	1/1:17,0:30:15.05:209,15,0	0/1:14,0:14:7.83:87,0,8
chr10	31836740	.	G	GT	7752.56	PASS	AB=0.933;AC=45;AF=0.804;AN=56;BaseQRankSum=10.936;DP=630;FS=8.075;HRun=10;HaplotypeScore=166.8103;InbreedingCoeff=0.7098;MQ=57.40;MQ0=4;MQRankSum=-12.261;QD=15.20;ReadPosRankSum=2.816;VQSLOD=3.6852;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:24,1:24:39.26:390,39,0	1/1:3,5:8:18.05:191,18,0	0/1:25,0:19:17.98:18,0,108	0/0:27,0:17:15.81:0,16,201	1/1:9,12:22:34.26:353,34,0	1/1:5,24:30:62.87:626,63,0	1/1:6,8:15:32.91:330,33,0	0/0:30,0:30:67.83:0,68,565	1/1:9,11:21:46.98:440,47,0	1/1:28,0:29:57.90:411,58,0	1/1:24,0:25:59.48:490,59,0	1/1:13,0:18:34.13:221,34,0	1/1:19,0:20:39.48:326,39,0	1/1:21,0:21:50.69:430,51,0	1/1:8,14:22:58.69:570,59,0	1/1:22,0:24:67.90:482,68,0	1/1:23,0:23:26.99:302,27,0	1/1:14,0:18:20.05:170,20,0	0/1:21,3:24:44.14:44,0,311	0/0:21,0:22:58.97:0,59,474	0/1:9,1:10:0.96:1,0,191	1/1:26,0:26:63.56:500,64,0	1/1:20,0:24:52.82:361,53,0	1/1:15,0:18:30.91:221,31,0	1/1:28,0:29:56.56:450,57,0	1/1:22,0:23:36.36:344,36,0	0/0:37,2:38:69.75:0,70,771	1/1:4,0:5:11.79:82,12,0
chr10	31836748	.	T	TG	9553.19	PASS	AB=0.825;AC=33;AF=0.589;AN=56;BaseQRankSum=9.115;DP=630;FS=0.000;HRun=0;HaplotypeScore=164.7740;InbreedingCoeff=0.3477;MQ=55.12;MQ0=5;MQRankSum=-11.321;QD=21.66;ReadPosRankSum=9.846;VQSLOD=4.4288;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:4,20:23:9.75:623,0,10	1/1:7,0:7:14.75:59,15,0	0/0:30,0:21:53.43:0,53,520	0/0:30,0:18:46.60:0,47,467	0/1:22,0:22:46.30:60,0,46	0/1:28,0:28:6.73:118,0,7	0/1:16,0:16:22.51:70,0,23	0/0:30,0:30:85.05:0,85,1088	0/1:20,0:20:60.98:88,0,61	1/1:8,19:26:30.98:839,31,0	1/1:4,20:24:41.63:771,42,0	1/1:9,5:14:8.45:389,8,0	1/1:9,11:20:38.99:614,39,0	1/1:4,18:22:59.74:752,60,0	0/1:26,0:25:42.20:93,0,42	1/1:8,19:27:27.09:795,27,0	0/1:10,14:24:17.25:568,0,17	0/1:8,7:16:21.67:314,0,22	0/0:25,0:25:58.89:0,59,808	0/0:23,0:23:69.12:0,69,891	0/0:12,0:12:21.78:0,22,377	1/1:1,23:25:62.10:888,62,0	1/1:7,14:22:16.18:571,16,0	0/1:5,13:18:6.93:291,0,7	1/1:10,19:29:38.79:869,39,0	1/1:7,19:26:22.82:670,23,0	0/0:39,0:38:99:0,108,1469	1/1:2,2:4:9.91:116,10,0
chr10	31836750	.	TG	T	4925.33	PASS	AB=0.992;AC=34;AF=0.607;AN=56;BaseQRankSum=14.686;DP=630;FS=3.103;HRun=1;HaplotypeScore=183.8243;InbreedingCoeff=0.6872;MQ=54.88;MQ0=5;MQRankSum=-9.631;QD=11.84;ReadPosRankSum=2.308;VQSLOD=3.7133;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:23:61.78:329,62,0	0/0:7,0:7:9.02:0,9,59	0/0:29,1:21:6.14:0,6,191	0/1:31,1:20:11.26:11,0,244	0/1:23,0:23:26.25:26,0,102	0/0:30,0:30:44:0,44,289	0/1:16,0:16:7.80:8,0,67	0/0:30,0:30:64.19:0,64,908	0/0:19,0:19:37.27:0,37,221	1/1:28,0:27:75.89:458,76,0	1/1:24,0:24:63.64:342,64,0	1/1:14,0:14:40.45:235,40,0	1/1:19,0:19:52.24:301,52,0	1/1:22,0:22:63.08:346,63,0	0/1:27,0:26:87.13:87,0,136	1/1:26,1:27:78.05:432,78,0	1/1:24,0:24:58.12:336,58,0	1/1:17,0:17:40.38:225,40,0	0/0:24,0:24:44.97:0,45,597	0/0:24,0:24:45.38:0,45,704	0/0:12,0:12:21.49:0,21,331	1/1:25,0:25:71.51:393,72,0	1/1:20,1:21:58.01:341,58,0	1/1:17,0:17:34.53:187,35,0	1/1:28,0:28:80.70:447,81,0	1/1:24,0:24:66.33:362,66,0	0/0:38,0:37:99:0,110,1175	1/1:4,0:4:10.83:58,11,0
chr10	31836758	.	GT	G	2103.86	PASS	AB=0.836;AC=25;AF=0.446;AN=56;BaseQRankSum=8.954;DP=635;FS=17.129;HRun=10;HaplotypeScore=192.4027;InbreedingCoeff=0.4547;MQ=54.97;MQ0=5;MQRankSum=-7.988;QD=5.89;ReadPosRankSum=2.652;VQSLOD=-0.0344;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:22,3:24:41.31:170,0,41	0/0:4,0:6:16.54:0,17,90	0/0:28,0:20:33.80:0,34,244	0/0:24,0:16:19.03:0,19,129	0/0:19,0:21:20.40:0,20,143	0/0:27,0:30:50.97:0,51,363	0/0:6,0:14:28.37:0,28,166	0/0:29,1:31:39.91:0,40,622	0/0:11,0:20:45.35:0,45,276	0/1:23,10:32:28.95:229,0,29	1/1:26,2:28:23.83:184,24,0	1/1:11,6:17:6.40:189,6,0	0/1:18,3:21:36.84:80,0,37	0/1:18,5:23:18.32:67,0,18	0/0:17,0:24:26.71:0,27,177	1/1:21,8:29:20.01:193,20,0	1/1:21,5:26:24.31:169,24,0	1/1:9,7:16:20.47:154,20,0	0/1:16,2:18:19.05:19,0,254	0/0:23,1:24:37.06:0,37,603	0/0:10,0:11:26.91:0,27,279	1/1:25,1:26:3.89:122,4,0	0/1:14,6:20:54.75:101,0,55	0/1:15,4:19:3.30:127,0,3	1/1:23,2:25:25.59:159,26,0	1/1:21,6:27:43:317,43,0	0/0:43,0:42:99:0,114,1233	1/1:3,1:4:3.45:24,3,0
chr10	31836759	.	T	TTTTG	18017.08	PASS	AB=1.000;AC=38;AF=0.679;AN=56;BaseQRankSum=13.248;DP=636;FS=0.682;HRun=0;HaplotypeScore=172.7868;InbreedingCoeff=0.4944;MQ=57.57;MQ0=5;MQRankSum=-9.274;QD=37.61;ReadPosRankSum=4.714;VQSLOD=5.0948;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:16,9:24:74.34:947,74,0	0/1:6,0:6:21.90:113,0,22	0/0:30,0:21:31.79:0,32,457	0/1:25,0:17:23:23,0,273	0/1:21,0:21:99:170,0,105	0/1:30,0:30:99:167,0,288	1/1:14,0:14:18.94:445,19,0	0/0:31,0:31:75.11:0,75,1117	0/1:21,0:21:99:270,0,151	1/1:18,14:31:89.94:1503,90,0	1/1:10,17:28:80.05:1596,80,0	1/1:12,5:17:47.97:899,48,0	1/1:17,4:21:47.23:695,47,0	1/1:11,12:23:62.74:1176,63,0	0/1:25,0:24:80.86:421,0,81	1/1:10,17:28:81.20:1753,81,0	1/1:18,8:26:52.12:962,52,0	1/1:9,7:16:39.10:783,39,0	0/0:17,0:17:48.09:0,48,672	0/0:25,0:25:72.18:0,72,1102	0/0:11,0:11:30.04:0,30,492	1/1:9,17:26:77.86:1483,78,0	1/1:14,6:20:50.18:764,50,0	1/1:12,7:19:38.57:643,39,0	1/1:8,16:25:69.34:1482,69,0	1/1:14,13:27:78.13:1507,78,0	0/0:43,0:42:99:0,120,1988	1/1:2,2:4:5.71:214,6,0
chr10	31837922	.	G	GAC	400.90	PASS	AB=1.000;AC=20;AF=0.417;AN=48;BaseQRankSum=-0.150;DP=505;FS=15.943;HRun=0;HaplotypeScore=118.9715;InbreedingCoeff=-0.2830;MQ=28.61;MQ0=94;MQRankSum=-2.238;QD=1.17;ReadPosRankSum=-0.210;VQSLOD=1.1280;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:17:0.28:1,0,0	./.	./.	./.	0/0:14,0:12:0:0,0,0	0/0:18,0:14:0:0,0,0	1/1:12,0:8:2.51:6,3,0	0/1:36,0:35:67.57:68,0,257	1/1:12,0:10:4.41:23,4,0	0/1:23,0:16:81.53:82,0,105	0/0:12,0:11:2.64:0,3,14	0/1:22,0:20:18.24:18,0,49	0/1:27,0:23:24.05:24,0,103	0/1:25,0:19:21.50:22,0,42	0/0:16,9:19:0:0,0,0	0/1:25,0:19:6.14:45,0,6	0/1:17,0:14:34.62:46,0,35	0/1:11,0:8:20.56:42,0,21	0/0:17,0:11:4.64:0,5,145	0/1:23,0:21:7.85:8,0,41	0/1:20,0:10:13.04:13,0,46	0/0:19,0:17:2.64:0,3,16	./.	0/0:17,0:12:1.55:0,2,5	1/1:19,0:17:2.37:8,2,0	0/1:23,0:18:85.95:86,0,108	0/1:24,0:14:31.12:31,0,146	0/0:15,0:2:5.95:0,6,42
chr10	31837936	.	G	GAC	158.31	PASS	AB=0.988;AC=16;AF=0.348;AN=46;BaseQRankSum=1.645;DP=397;FS=1.014;HRun=0;HaplotypeScore=88.8876;InbreedingCoeff=-0.1606;MQ=26.29;MQ0=94;MQRankSum=0.196;QD=0.70;ReadPosRankSum=-1.222;VQSLOD=1.7231;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:17:1.42:1,0,6	./.	./.	./.	0/0:10,0:8:0:0,0,0	0/0:12,0:9:0:0,0,0	1/1:9,0:6:2.02:11,2,0	0/0:21,0:20:22.54:0,23,238	1/1:5,0:3:2.37:8,2,0	0/1:16,0:11:19.68:20,0,78	0/1:9,0:8:0.01:0,0,0	0/0:15,0:15:8.45:0,8,45	0/1:25,0:21:4.98:5,0,65	0/1:20,0:14:10.82:13,0,11	0/0:19,0:13:0:0,0,0	0/1:26,0:18:11.77:12,0,19	0/1:16,0:13:11.92:44,0,12	0/1:12,0:8:10.15:10,0,36	0/1:10,2:8:49.41:49,0,76	0/0:8,11:17:7.79:0,8,37	0/1:17,0:7:14.63:15,0,29	0/0:16,0:14:2.68:0,3,19	./.	0/0:16,0:10:0.42:0,0,1	./.	0/1:14,0:9:35.09:35,0,71	0/1:20,0:9:6.52:49,0,7	0/0:13,0:1:2.98:0,3,21
chr10	31838718	.	TTCTCTCTCTCTCTC	T	4578.94	PASS	AB=0.884;AC=34;AF=0.708;AN=48;BaseQRankSum=3.832;DP=541;FS=9.345;HRun=0;HaplotypeScore=191.7836;InbreedingCoeff=0.3533;MQ=68.71;MQ0=13;MQRankSum=-1.155;QD=11.65;ReadPosRankSum=4.050;VQSLOD=2.9983;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:27:3.01:45,3,0	0/0:9,0:8:6.01:0,6,221	./.	./.	0/1:19,0:19:0:0,0,0	0/0:25,0:23:4.26:0,4,141	0/0:17,0:17:15.05:0,15,619	1/1:34,0:33:2.90:16,3,0	0/0:10,0:12:12.03:0,12,205	1/1:28,3:31:5.60:196,6,0	1/1:11,4:14:9.03:260,9,0	1/1:23,4:28:8.39:314,8,0	1/1:17,5:23:13.79:561,14,0	1/1:7,0:6:3.01:44,3,0	1/1:18,9:27:15.05:581,15,0	1/1:18,8:25:20.90:813,21,0	0/1:15,2:17:99:117,0,147	1/1:16,0:16:4.51:96,5,0	1/1:22,0:23:4.91:109,5,0	1/1:12,0:16:9.03:293,9,0	0/0:16,0:15:3.01:0,3,131	1/1:7,4:11:6:142,6,0	0/1:10,4:13:99:239,0,124	1/1:15,4:18:6.02:232,6,0	./.	0/1:16,3:19:99:131,0,141	1/1:13,0:19:12.04:390,12,0	./.
chr10	31839077	.	AT	A	12136.57	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-1.754;DP=544;FS=1.038;HRun=8;HaplotypeScore=58.1472;InbreedingCoeff=0.9250;MQ=74.02;MQ0=0;MQRankSum=-6.346;QD=23.34;ReadPosRankSum=3.418;VQSLOD=5.5453;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,15:21:42.06:406,42,0	1/1:1,10:11:27.04:261,27,0	0/0:15,0:15:26.29:0,26,335	0/0:9,0:9:12.01:0,12,126	1/1:2,25:27:69.10:662,69,0	1/1:4,23:26:57.09:550,57,0	1/1:1,10:11:24.03:232,24,0	1/1:2,29:31:87.11:829,87,0	1/1:1,12:13:30.05:290,30,0	1/1:7,32:39:96.09:909,96,0	1/1:2,23:25:66.06:628,66,0	1/1:1,6:7:18.03:174,18,0	1/1:0,23:23:69.11:666,69,0	1/1:6,20:26:48.07:464,48,0	1/1:0,16:16:45.07:435,45,0	1/1:2,17:19:44.96:434,45,0	1/1:3,21:24:51.07:492,51,0	1/1:0,15:15:39.06:377,39,0	1/1:3,11:14:33.05:319,33,0	1/1:4,24:28:60.01:568,60,0	1/1:2,10:12:27.04:261,27,0	1/1:0,10:10:27.04:261,27,0	1/1:0,25:25:62.84:608,63,0	1/1:4,13:17:39.06:377,39,0	1/1:0,18:18:54.09:522,54,0	1/1:0,20:20:60.08:574,60,0	1/1:4,31:35:81.13:782,81,0	1/1:0,6:6:6.01:58,6,0
chr10	31840724	.	TCC	T	3003.88	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=7.973;DP=601;FS=4.451;HRun=9;HaplotypeScore=78.9628;InbreedingCoeff=0.9613;MQ=70.69;MQ0=1;MQRankSum=-0.598;QD=27.81;ReadPosRankSum=2.484;VQSLOD=3.8736;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:66.18:0,66,1003	1/1:5,13:18:33.09:385,33,0	0/0:12,0:12:32.59:0,33,449	0/0:18,0:16:3.90:0,4,332	1/1:1,26:27:78.23:908,78,0	1/1:1,25:26:72.21:839,72,0	1/1:1,18:19:48.14:559,48,0	0/0:27,0:27:50.73:0,51,640	1/1:2,16:18:42.12:488,42,0	0/0:24,0:25:65.70:0,66,1011	0/0:14,0:14:39.09:0,39,605	0/0:19,0:19:45.15:0,45,738	0/0:14,0:14:39.10:0,39,570	0/0:28,0:28:81.22:0,81,1267	0/0:0,0:36:84.59:0,85,298	0/0:12,0:12:33.10:0,33,514	0/0:32,0:32:90.28:0,90,1429	0/0:8,0:8:24.08:0,24,389	0/0:17,0:18:38.62:0,39,596	0/0:29,0:30:78.21:0,78,1142	0/0:26,0:26:63.19:0,63,978	0/0:22,0:22:60.19:0,60,924	0/0:20,0:20:51.16:0,51,808	0/0:28,0:28:78.21:0,78,1223	0/0:22,0:22:60.19:0,60,961	0/0:23,0:23:51.17:0,51,837	0/0:25,0:26:74.74:0,75,1181	0/0:7,0:7:15.04:0,15,222
chr10	31844226	.	GTCAC	G	216.40	PASS	AB=0.950;AC=3;AF=0.054;AN=56;BaseQRankSum=4.609;DP=755;FS=7.342;HRun=0;HaplotypeScore=179.1306;InbreedingCoeff=0.7148;MQ=66.92;MQ0=9;MQRankSum=-4.068;QD=4.92;ReadPosRankSum=0.336;VQSLOD=2.0690;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:41:93.32:0,93,1949	0/0:14,0:14:39.13:0,39,913	0/0:41,0:29:38.90:0,39,654	0/0:46,0:36:28.98:0,29,370	0/0:28,0:28:60.03:0,60,1224	0/0:16,0:13:24.08:0,24,519	0/0:22,0:20:30.10:0,30,659	0/0:31,0:28:21.07:0,21,413	0/0:28,0:24:57.20:0,57,1376	0/0:26,0:26:63.21:0,63,1357	0/0:26,0:26:66.23:0,66,1456	0/0:16,0:15:30.10:0,30,708	0/0:35,0:33:56.23:0,56,1416	0/0:31,0:31:72.23:0,72,1685	1/1:7,18:21:21.07:308,21,0	0/0:29,0:24:60.20:0,60,1304	0/0:16,0:19:44.47:0,44,812	0/0:15,0:15:39.13:0,39,866	0/0:20,0:15:27.09:0,27,611	0/0:26,0:26:63.20:0,63,1246	0/0:28,0:27:60.21:0,60,1317	0/0:20,0:20:36.03:0,36,703	0/0:24,0:24:48.15:0,48,1015	0/0:40,0:40:93.30:0,93,2037	0/1:18,1:19:3.96:4,0,910	0/0:30,0:29:69.24:0,69,1497	0/0:43,0:42:96.33:0,96,2257	0/0:15,0:15:36.12:0,36,863
chr10	31847165	.	T	TA	10561.90	PASS	AB=0.654;AC=46;AF=0.821;AN=56;BaseQRankSum=-6.861;DP=582;FS=4.800;HRun=10;HaplotypeScore=66.7790;InbreedingCoeff=0.0080;MQ=76.56;MQ0=1;MQRankSum=-3.174;QD=18.89;ReadPosRankSum=2.920;VQSLOD=5.8220;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,12:19:1.93:325,2,0	1/1:1,1:2:3.01:32,3,0	0/0:23,0:20:19.49:0,19,182	0/1:15,0:13:8.96:9,0,79	1/1:4,18:22:32.42:523,32,0	1/1:8,16:24:13.69:525,14,0	1/1:2,14:16:30.08:320,30,0	1/1:11,28:39:47.35:669,47,0	1/1:1,11:12:33.08:352,33,0	1/1:8,15:23:42.18:501,42,0	1/1:6,13:20:20.32:394,20,0	0/1:4,10:14:19.57:226,0,20	0/1:8,11:19:42.22:250,0,42	1/1:4,13:17:14.40:346,14,0	1/1:5,18:23:53.72:554,54,0	1/1:5,11:17:32.71:304,33,0	1/1:5,24:29:51.60:545,52,0	0/1:5,12:18:8.77:296,0,9	1/1:4,20:26:61.79:566,62,0	1/1:5,33:38:96.17:997,96,0	0/1:2,3:5:18.63:26,0,19	1/1:4,7:11:18.01:180,18,0	0/1:6,17:23:4.52:359,0,5	0/1:7,8:15:19.21:226,0,19	0/1:9,21:31:23:367,0,23	1/1:6,25:31:66.12:686,66,0	1/1:3,23:26:38.35:614,38,0	1/1:8,16:23:1.23:372,1,0
chr10	31848131	.	G	GGT	4881.48	PASS	AB=0.955;AC=33;AF=0.589;AN=56;BaseQRankSum=3.405;DP=618;FS=36.626;HRun=0;HaplotypeScore=111.2788;InbreedingCoeff=0.2785;MQ=74.47;MQ0=4;MQRankSum=-1.101;QD=10.39;ReadPosRankSum=3.916;VQSLOD=2.9241;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:39,0:39:21.63:65,0,22	0/0:8,0:8:16.69:0,17,75	0/0:30,0:22:41.51:0,42,413	0/0:26,0:23:7.90:0,8,388	0/0:32,0:32:36.22:0,36,318	0/0:17,0:17:0.79:0,1,128	0/1:16,0:16:17.19:17,0,78	1/1:10,16:26:16.51:652,17,0	0/0:28,0:28:52.70:0,53,273	0/1:23,0:23:23.61:54,0,24	1/1:10,0:10:15.13:57,15,0	0/1:23,0:23:69.28:69,0,90	0/1:22,0:22:13:70,0,13	0/1:25,0:25:21.57:94,0,22	0/0:7,0:7:12.66:0,13,122	1/1:20,0:20:25.89:86,26,0	1/1:25,0:23:5.60:99,6,0	1/1:12,0:12:12.46:35,12,0	0/1:4,8:13:0.34:333,0,0	1/1:2,18:22:57.09:855,57,0	1/1:13,27:40:72.25:1177,72,0	1/1:14,0:13:15.45:43,15,0	1/1:17,0:17:4.76:53,5,0	1/1:25,0:25:19.06:90,19,0	0/1:33,0:33:15.67:48,0,16	0/1:23,0:23:57.95:65,0,58	1/1:6,22:28:56.97:849,57,0	1/1:13,0:13:21.35:71,21,0
chr10	31848148	.	G	GGC	11613.56	PASS	AB=1.000;AC=31;AF=0.554;AN=56;BaseQRankSum=-15.949;DP=585;FS=9.718;HRun=0;HaplotypeScore=85.6961;InbreedingCoeff=0.9247;MQ=76.27;MQ0=4;MQRankSum=-0.018;QD=36.64;ReadPosRankSum=5.611;VQSLOD=6.9321;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,28:31:57.19:1021,57,0	0/0:6,0:6:18.06:0,18,269	0/0:31,0:23:63.13:0,63,835	0/0:25,0:22:32.42:0,32,636	0/0:35,0:35:99:0,102,1416	0/0:17,0:17:48.11:0,48,672	0/0:17,0:17:51.13:0,51,662	0/0:28,0:28:61.63:0,62,608	0/0:26,0:26:75.24:0,75,1087	1/1:1,27:28:81.18:1347,81,0	1/1:0,10:10:24.08:406,24,0	1/1:2,19:21:47.99:816,48,0	1/1:1,20:21:45.15:804,45,0	1/1:2,18:21:53.77:918,54,0	0/0:12,0:12:12.40:0,12,127	1/1:0,18:18:48.16:857,48,0	1/1:0,19:17:36.12:641,36,0	1/1:0,10:10:21.07:376,21,0	0/0:16,0:16:40.80:0,41,327	0/0:21,0:21:10.84:0,11,158	0/0:34,0:34:42.34:0,42,301	1/1:0,12:11:27.09:484,27,0	1/1:1,13:14:27.09:482,27,0	1/1:0,23:23:54.19:967,54,0	1/1:3,30:33:54.17:968,54,0	1/1:2,21:23:63.07:1034,63,0	0/1:23,0:23:8.53:9,0,62	1/1:0,10:10:27.09:483,27,0
chr10	31849432	.	CACCACCACA	C	2303.05	PASS	AB=1.000;AC=33;AF=0.589;AN=56;BaseQRankSum=3.939;DP=277;FS=0.000;HRun=0;HaplotypeScore=80.2684;InbreedingCoeff=0.3593;MQ=57.24;MQ0=14;MQRankSum=-2.040;QD=11.02;ReadPosRankSum=1.852;VQSLOD=1.6631;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:20:59.18:519,59,0	1/1:2,0:2:1.82:5,2,0	0/0:10,0:6:18.05:0,18,206	0/0:15,0:10:21.79:0,22,261	1/1:6,0:6:2.96:19,3,0	1/1:5,0:4:8.01:70,8,0	1/1:5,0:4:11.86:82,12,0	0/0:7,0:7:12.49:0,12,114	1/1:14,0:14:39.38:262,39,0	1/1:6,0:6:14.98:151,15,0	1/1:3,0:3:9:81,9,0	0/1:16,0:16:99:131,0,246	0/1:15,0:14:99:256,0,138	0/1:16,0:16:36.79:37,0,258	1/1:1,0:13:5.74:86,6,0	1/1:4,0:3:9:81,9,0	1/1:0,14:14:8.90:146,9,0	0/1:8,0:8:1.05:147,0,1	0/0:9,0:7:11.55:0,12,114	0/0:6,0:6:17.98:0,18,150	0/1:26,0:25:61.32:61,0,362	0/0:10,0:9:6.70:0,7,145	0/0:7,0:6:11.93:0,12,90	0/1:16,0:15:51.16:51,0,179	1/1:7,0:6:4.40:55,4,0	1/1:7,0:6:18.01:209,18,0	0/0:4,0:4:8.46:0,8,74	0/1:6,0:5:24.20:42,0,24
chr10	31849438	.	CACA	C	1573.99	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=0.761;DP=296;FS=1.133;HRun=0;HaplotypeScore=58.7608;InbreedingCoeff=0.8070;MQ=61.04;MQ0=12;MQRankSum=-1.208;QD=12.30;ReadPosRankSum=0.535;VQSLOD=2.8587;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:20:53.22:431,53,0	1/1:2,0:2:1.82:5,2,0	0/0:11,0:8:24.03:0,24,263	0/0:20,0:15:33.81:0,34,400	1/1:6,0:6:2.96:19,3,0	1/1:9,0:8:14.92:114,15,0	1/1:7,0:6:17.85:130,18,0	0/0:8,0:8:15.49:0,15,142	1/1:14,0:14:39.38:262,39,0	1/1:7,0:7:14.97:139,15,0	1/1:4,0:4:11.97:101,12,0	0/0:17,0:17:39.71:0,40,340	0/0:15,0:14:22.03:0,22,199	0/0:16,0:16:41.91:0,42,349	1/1:13,0:13:5.61:36,6,0	1/1:6,0:5:15:132,15,0	1/1:14,0:13:5.88:47,6,0	1/1:9,0:9:1.95:169,2,0	0/0:9,0:7:12.02:0,12,114	0/0:8,0:8:23.97:0,24,200	0/0:26,0:25:54.21:0,54,515	0/0:10,0:9:26.88:0,27,214	0/0:6,0:6:9.90:0,10,87	0/0:17,0:16:36.33:0,36,286	1/1:6,0:5:0.78:43,1,0	1/1:3,4:6:11.99:103,12,0	0/0:4,0:4:11.98:0,12,99	1/1:4,0:4:3.96:48,4,0
chr10	31849450	.	AACAACAACC	A	1196.34	PASS	AB=0.938;AC=8;AF=0.143;AN=56;BaseQRankSum=3.586;DP=360;FS=33.480;HRun=0;HaplotypeScore=107.9013;InbreedingCoeff=0.1043;MQ=80.23;MQ0=8;MQRankSum=-5.301;QD=14.24;ReadPosRankSum=0.835;VQSLOD=0.6692;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:66:0,66,971	1/1:3,0:3:8.99:84,9,0	0/0:20,0:16:40.86:0,41,1405	0/0:31,0:26:75.54:0,76,2029	0/1:4,6:10:14.62:90,0,15	0/1:11,0:10:26.15:212,0,26	0/1:13,0:12:20.55:280,0,21	0/0:12,0:12:34.88:0,35,814	0/1:19,0:19:20.88:544,0,21	0/0:10,0:10:29.98:0,30,491	0/0:5,0:5:15.05:0,15,246	0/0:18,0:18:38.69:0,39,1500	0/0:15,0:14:25.78:0,26,876	0/0:19,0:19:57.06:0,57,1600	0/1:13,0:13:18.37:91,0,18	0/0:8,0:7:21.07:0,21,354	0/1:15,0:14:33.30:33,0,63	0/0:11,0:11:33.09:0,33,519	0/0:6,0:6:18.06:0,18,551	0/0:11,0:11:33.07:0,33,1001	0/0:31,0:30:84.21:0,84,2359	0/0:9,0:9:27.09:0,27,805	0/0:6,0:6:18.06:0,18,438	0/0:17,0:16:45.08:0,45,1152	0/0:7,0:6:16.81:0,17,203	0/0:9,0:9:26.82:0,27,446	0/0:5,0:5:15.05:0,15,474	0/0:4,0:4:12.04:0,12,213
chr10	31850012	.	CG	C	4568.96	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=3.651;DP=733;FS=13.061;HRun=1;HaplotypeScore=156.6770;InbreedingCoeff=0.9993;MQ=69.68;MQ0=0;MQRankSum=-0.111;QD=11.51;ReadPosRankSum=5.191;VQSLOD=2.0188;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:47,0:47:99:569,103,0	0/0:14,1:15:23.70:0,24,412	0/0:31,0:31:86.97:0,87,1243	0/0:25,0:25:69.19:0,69,1003	0/0:13,2:13:39.10:0,39,452	0/0:23,0:23:37.51:0,38,620	0/0:30,0:30:87.20:0,87,1009	0/0:40,1:40:84.22:0,84,520	0/0:28,1:28:72.58:0,73,886	1/1:30,2:31:80.87:499,81,0	1/1:13,2:14:24.47:127,24,0	1/1:25,0:25:61.58:265,62,0	1/1:26,2:28:57.90:328,58,0	1/1:17,0:17:41.51:218,42,0	0/0:31,0:31:90.22:0,90,1031	1/1:32,1:33:76.30:417,76,0	1/1:20,0:20:47.58:226,48,0	1/1:20,0:20:46.01:249,46,0	0/0:12,0:12:28.47:0,28,170	0/0:22,2:24:43.98:0,44,406	0/0:23,0:23:63.90:0,64,403	1/1:27,0:27:66.84:302,67,0	1/1:31,3:31:57.27:349,57,0	1/1:24,0:24:47.92:201,48,0	1/1:32,1:32:44.54:316,45,0	1/1:21,2:23:45.40:288,45,0	0/0:37,0:37:99:0,99,681	1/1:17,2:19:45.74:215,46,0
chr10	31852303	.	G	GA	2651.15	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=9.178;DP=537;FS=5.054;HRun=0;HaplotypeScore=72.7847;InbreedingCoeff=0.9640;MQ=58.40;MQ0=7;MQRankSum=-10.226;QD=32.33;ReadPosRankSum=-2.917;VQSLOD=2.3669;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:84.28:0,84,1173	1/1:0,3:3:9.03:143,9,0	0/0:14,0:12:32.67:0,33,410	0/0:15,0:10:30.04:0,30,374	1/1:0,19:19:45.15:717,45,0	1/1:0,8:8:21.07:335,21,0	1/1:0,7:7:6.02:96,6,0	0/0:23,0:19:51.17:0,51,707	1/1:1,14:15:27.09:430,27,0	0/0:20,0:20:57.19:0,57,797	0/0:14,0:14:42.14:0,42,584	0/0:39,0:39:99:0,114,1594	0/0:14,0:14:29.71:0,30,494	0/0:17,0:17:48.16:0,48,671	1/1:0,30:29:72.24:1110,72,0	0/0:13,0:13:39.13:0,39,544	0/0:39,0:39:99:0,111,1528	0/0:21,0:21:60.16:0,60,817	0/0:18,0:16:45.15:0,45,629	0/0:16,0:16:48.16:0,48,671	0/0:47,0:46:99:0,120,1675	0/0:11,0:11:33.11:0,33,462	0/0:13,0:13:39.13:0,39,545	0/0:27,0:27:81.27:0,81,1119	0/0:21,0:21:60.20:0,60,839	0/0:12,0:12:33.10:0,33,446	0/0:24,0:24:72.24:0,72,1007	0/0:7,0:7:21.07:0,21,293
chr10	31852517	.	GT	G	5059.96	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-4.503;DP=406;FS=5.773;HRun=10;HaplotypeScore=55.3094;InbreedingCoeff=0.9727;MQ=63.75;MQ0=2;MQRankSum=2.081;QD=22.79;ReadPosRankSum=4.891;VQSLOD=5.4242;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,30:33:47.81:644,48,0	0/0:5,0:5:15.04:0,15,166	0/0:6,0:6:11.99:0,12,122	0/0:6,0:6:11.94:0,12,104	0/0:28,0:28:63.13:0,63,681	0/0:12,0:12:36.10:0,36,398	0/0:6,0:6:12.02:0,12,124	0/0:16,0:29:60.63:0,61,374	0/0:9,0:9:24.06:0,24,265	1/1:2,14:16:44.98:387,45,0	1/1:2,17:19:17.83:383,18,0	1/1:0,16:16:47.99:417,48,0	1/1:0,6:6:18:156,18,0	1/1:0,15:15:44.99:390,45,0	0/0:15,0:15:36.10:0,36,398	1/1:2,5:7:14.99:130,15,0	1/1:2,23:25:68.97:599,69,0	1/1:1,14:15:38.99:339,39,0	0/0:11,0:16:34.90:0,35,221	0/0:8,0:20:42.96:0,43,229	0/0:4,0:9:11.52:0,12,63	1/1:2,8:10:23.98:208,24,0	1/1:0,10:10:26.99:234,27,0	1/1:0,5:5:15:130,15,0	1/1:2,11:13:32.98:286,33,0	1/1:2,20:22:56.97:495,57,0	0/0:10,0:20:48.95:0,49,272	1/1:0,10:10:29.99:260,30,0
chr10	31852550	.	G	GT	2269.47	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-3.922;DP=444;FS=14.209;HRun=9;HaplotypeScore=69.1930;InbreedingCoeff=0.9414;MQ=71.02;MQ0=3;MQRankSum=-3.060;QD=23.16;ReadPosRankSum=-4.092;VQSLOD=1.7669;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,1:33:47.79:0,48,641	0/0:6,0:6:18:0,18,156	0/0:27,0:17:14.76:0,15,143	0/0:15,0:12:10.76:0,11,77	0/0:26,0:26:62.97:0,63,546	0/0:13,0:13:38.99:0,39,336	0/0:4,0:4:12:0,12,104	1/1:7,29:36:90.03:948,90,0	0/0:13,1:14:5.80:0,6,275	0/0:12,0:12:32.98:0,33,284	0/0:19,1:20:25.60:0,26,437	0/0:18,0:18:53.99:0,54,469	0/0:11,0:11:32.99:0,33,286	0/0:14,0:14:38.99:0,39,338	0/0:16,0:16:44.96:0,45,384	0/0:15,0:15:44.95:0,45,381	0/0:21,0:21:56.94:0,57,486	0/0:17,0:17:47.99:0,48,416	1/1:3,11:14:33.09:365,33,0	1/1:1,11:12:27.06:289,27,0	1/1:2,6:8:18.05:198,18,0	0/0:4,0:4:12:0,12,104	0/0:7,0:7:17.99:0,18,156	0/0:7,0:7:20.95:0,21,175	0/0:16,0:16:47.99:0,48,416	0/0:17,0:17:47.99:0,48,417	1/1:4,23:26:59.83:643,60,0	0/0:12,0:12:32.98:0,33,286
chr10	31853026	.	G	GT	22237.65	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=2.743;DP=704;FS=7.485;HRun=0;HaplotypeScore=88.9670;InbreedingCoeff=0.9970;MQ=85.30;MQ0=0;MQRankSum=-3.355;QD=41.80;ReadPosRankSum=6.452;VQSLOD=4.7180;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,53:53:99:2059,129,0	1/1:0,6:6:15.05:240,15,0	0/0:25,0:25:69.01:0,69,914	0/0:19,0:19:55.02:0,55,654	1/1:2,30:33:84.29:1329,84,0	1/1:0,18:18:48.16:766,48,0	1/1:0,29:29:75.26:1197,75,0	0/0:25,0:25:75.23:0,75,1000	1/1:1,21:22:51.17:810,51,0	1/1:0,25:25:72.16:1051,72,0	1/1:0,23:23:63.21:1005,63,0	1/1:0,29:29:87.30:1389,87,0	1/1:1,25:26:66.23:1052,66,0	1/1:2,35:37:99:1715,108,0	1/1:0,27:27:75.26:1198,75,0	1/1:0,29:29:78.27:1246,78,0	1/1:2,22:24:51.17:814,51,0	1/1:0,11:11:33.11:527,33,0	0/0:16,0:16:45.12:0,45,584	0/0:27,0:27:81.26:0,81,1113	0/0:35,0:35:99:0,102,1313	1/1:0,14:14:33.11:527,33,0	1/1:1,19:21:54.18:857,54,0	1/1:1,41:42:99:1629,102,0	1/1:0,22:22:63.21:1006,63,0	1/1:0,23:23:69.21:1056,69,0	0/0:25,0:25:72.24:0,72,997	1/1:0,18:18:48.16:766,48,0
chr10	31854751	.	TA	T	3110.08	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-1.555;DP=460;FS=0.441;HRun=1;HaplotypeScore=99.1002;InbreedingCoeff=0.9660;MQ=76.14;MQ0=0;MQRankSum=0.202;QD=34.18;ReadPosRankSum=3.029;VQSLOD=3.4931;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:51.14:0,51,689	1/1:0,7:7:18:227,18,0	0/0:16,0:16:39.98:0,40,503	0/0:7,0:7:3.57:0,4,76	1/1:0,22:22:66.21:903,66,0	1/1:0,16:16:45.15:626,45,0	1/1:0,15:15:39.13:537,39,0	0/0:17,0:17:48.15:0,48,656	1/1:0,15:15:36.12:502,36,0	0/0:14,0:14:42.13:0,42,571	0/0:29,0:29:87.21:0,87,1164	0/0:14,0:14:42.08:0,42,541	0/0:16,0:16:48.15:0,48,664	0/0:14,0:14:42.10:0,42,542	1/1:0,16:16:36.12:502,36,0	0/0:19,0:19:57.12:0,57,725	0/0:28,0:28:78.21:0,78,1073	0/0:22,0:22:57.16:0,57,790	0/0:13,0:13:39.09:0,39,520	0/0:21,0:21:60.17:0,60,819	0/0:11,0:11:33.06:0,33,415	0/0:21,0:21:57.72:0,58,795	0/0:14,0:14:42.13:0,42,582	0/0:8,0:8:24.08:0,24,343	0/0:21,0:21:63.20:0,63,883	0/0:17,0:17:48.16:0,48,686	0/0:18,0:18:54.18:0,54,771	0/0:12,0:12:36.06:0,36,454
chr10	31855296	.	A	AAAATAAAT	2633.70	PASS	AB=1.000;AC=37;AF=0.974;AN=38;DP=262;FS=0.000;HRun=0;HaplotypeScore=71.1475;InbreedingCoeff=0.0993;MQ=60.11;MQ0=0;QD=13.17;VQSLOD=1.1981;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:8,0:8:3.01:93,3,0	1/1:2,0:2:2.84:14,3,0	./.	./.	1/1:11,0:11:2.37:8,2,0	1/1:13,0:13:9.03:29,9,0	./.	0/1:28,0:27:0:0,0,0	1/1:3,0:3:2.37:8,2,0	1/1:10,0:10:3:25,3,0	./.	1/1:9,0:9:6.02:187,6,0	1/1:12,0:12:6.02:187,6,0	1/1:5,0:5:6.02:190,6,0	./.	1/1:9,0:9:2.74:12,3,0	1/1:21,0:21:20.90:534,21,0	1/1:16,0:16:6.02:181,6,0	./.	./.	./.	./.	1/1:12,0:12:3.01:95,3,0	1/1:5,0:5:1.25:3,1,0	1/1:10,0:10:3.01:84,3,0	1/1:8,0:8:6.02:134,6,0	1/1:7,6:13:21.07:850,21,0	1/1:5,0:5:3.01:72,3,0
chr10	31855340	.	T	TG	653.17	PASS	AB=0.882;AC=28;AF=0.519;AN=54;BaseQRankSum=3.945;DP=203;FS=6.430;HRun=0;HaplotypeScore=48.3126;InbreedingCoeff=0.1317;MQ=55.50;MQ0=2;MQRankSum=-2.523;QD=5.58;ReadPosRankSum=1.164;VQSLOD=2.4324;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:5,1:6:19.66:36,0,20	1/1:0,1:1:3:25,3,0	0/1:14,0:8:1.58:2,0,40	0/0:8,0:5:9.01:0,9,86	0/1:7,1:8:49.19:49,0,61	0/1:7,3:10:30.12:116,0,30	0/0:5,0:5:10.85:0,11,51	0/0:41,0:37:99:0,99,1307	1/1:0,1:1:3.01:31,3,0	0/1:3,1:4:11.19:22,0,11	0/0:2,0:2:5.71:0,6,32	0/1:5,2:7:17.55:51,0,18	1/1:4,2:6:14.83:105,15,0	1/1:1,2:3:8.61:53,9,0	0/1:1,0:1:0:0,0,0	1/1:5,0:5:1.76:64,2,0	0/1:20,4:24:87.29:87,0,138	0/1:11,2:13:35.05:35,0,93	0/0:10,0:9:27.09:0,27,377	./.	0/0:2,0:2:5.85:0,6,56	1/1:1,0:1:2.94:18,3,0	1/1:1,1:2:5.74:36,6,0	0/1:5,0:5:5.32:5,0,39	1/1:3,0:3:5.84:34,6,0	1/1:2,1:3:1.99:46,2,0	0/0:10,0:10:29.52:0,30,231	0/0:8,0:8:7.98:0,8,47
chr10	31855341	.	A	AATGAATG	4057.14	PASS	AB=1.000;AC=41;AF=0.759;AN=54;BaseQRankSum=6.085;DP=207;FS=18.665;HRun=0;HaplotypeScore=68.4562;InbreedingCoeff=0.4971;MQ=55.45;MQ0=1;MQRankSum=-2.724;QD=31.21;ReadPosRankSum=4.266;VQSLOD=1.4979;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,1:6:8.05:132,8,0	1/1:0,0:1:3.01:45,3,0	0/0:14,0:8:10.71:0,11,77	0/0:8,0:5:8.56:0,9,67	1/1:7,0:8:1.23:86,1,0	1/1:7,0:10:25.56:256,26,0	1/1:5,0:5:9.48:30,9,0	0/0:42,0:38:99:0,99,2033	1/1:0,0:1:3.01:52,3,0	1/1:3,1:4:8.82:130,9,0	1/1:2,0:2:4.56:31,5,0	1/1:5,2:7:0.18:356,0,0	1/1:4,2:6:11.77:307,12,0	1/1:1,2:3:9.03:252,9,0	1/1:1,0:1:3:25,3,0	1/1:5,0:5:14.77:258,15,0	1/1:21,4:25:29.49:772,29,0	1/1:11,2:13:25.79:373,26,0	0/0:9,0:9:27.09:0,27,689	./.	0/0:3,0:3:6.02:0,6,111	0/0:1,0:1:2.97:0,3,20	1/1:1,1:2:2.64:98,3,0	1/1:5,0:5:4.60:56,5,0	1/1:3,0:3:6.02:188,6,0	1/1:2,1:3:9.03:236,9,0	0/1:10,0:10:99:241,0,104	1/1:2,0:10:3.49:134,3,0
chr10	31855514	.	A	AT	5110.40	PASS	AB=1.000;AC=41;AF=0.759;AN=54;BaseQRankSum=-0.067;DP=252;FS=11.568;HRun=4;HaplotypeScore=31.6328;InbreedingCoeff=0.6293;MQ=80.94;MQ0=2;MQRankSum=-1.868;QD=30.79;ReadPosRankSum=3.665;VQSLOD=3.7071;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,13:14:36.12:492,36,0	1/1:0,2:2:6.02:82,6,0	0/0:19,0:11:3.23:0,3,59	0/1:16,0:11:10.86:11,0,56	1/1:0,7:7:18.06:246,18,0	1/1:0,12:12:36.12:491,36,0	1/1:0,1:1:3.01:41,3,0	0/0:43,0:42:99:0,114,1261	1/1:0,7:7:15.05:205,15,0	1/1:0,4:4:12.04:164,12,0	1/1:1,5:6:15.05:205,15,0	1/1:0,5:5:9.03:123,9,0	1/1:0,1:1:3.01:41,3,0	1/1:0,3:3:6.02:82,6,0	1/1:0,6:6:9.03:123,9,0	1/1:0,4:4:6.02:82,6,0	1/1:2,23:25:66.22:902,66,0	1/1:1,9:11:30.10:407,30,0	0/0:14,0:14:42.09:0,42,464	0/0:2,0:2:3.01:0,3,34	0/0:5,0:5:15.04:0,15,170	1/1:0,1:1:3.01:41,3,0	./.	1/1:0,4:4:9.03:123,9,0	1/1:1,9:10:24.08:327,24,0	1/1:1,7:8:21.06:269,21,0	0/0:2,0:2:6.02:0,6,68	1/1:4,15:19:48.16:654,48,0
chr10	31855741	.	A	AGGCCAGGCTGTTC	13197.88	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=10.426;DP=321;FS=16.753;HRun=0;HaplotypeScore=94.5295;InbreedingCoeff=0.7598;MQ=76.75;MQ0=0;MQRankSum=-9.554;QD=65.66;ReadPosRankSum=4.084;VQSLOD=3.2689;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,0:22:15.05:876,15,0	1/1:0,0:5:6.02:351,6,0	0/0:17,0:17:51.17:0,51,1822	0/0:10,0:10:24.08:0,24,958	1/1:0,0:15:21:960,21,0	1/1:1,0:14:27.09:1587,27,0	1/1:0,0:8:6.02:351,6,0	0/0:37,0:37:99:0,108,3971	1/1:1,0:13:6.02:350,6,0	1/1:1,0:11:23.97:849,24,0	1/1:0,0:13:15.05:734,15,0	1/1:1,0:5:3.01:175,3,0	1/1:1,0:9:6.02:348,6,0	1/1:0,1:10:6.02:351,6,0	1/1:0,0:15:24.08:1401,24,0	1/1:0,0:8:9.03:526,9,0	1/1:1,0:5:6.02:277,6,0	1/1:0,0:3:3.01:175,3,0	0/0:12,0:12:36.12:0,36,1213	0/0:6,0:6:18.05:0,18,579	0/0:18,0:18:48.16:0,48,1934	1/1:0,0:2:6.02:212,6,0	1/1:0,0:3:3.48:152,3,0	1/1:3,0:3:6.02:350,6,0	1/1:0,0:15:24.08:1402,24,0	1/1:0,0:10:24.55:894,25,0	0/0:20,0:20:54.13:0,54,1801	1/1:0,0:7:15.05:877,15,0
chr10	31856547	.	GT	G	315.55	PASS	AB=0.731;AC=6;AF=0.107;AN=56;BaseQRankSum=7.741;DP=735;FS=3.355;HRun=1;HaplotypeScore=180.6437;InbreedingCoeff=-0.1011;MQ=63.81;MQ0=22;MQRankSum=-0.425;QD=2.37;ReadPosRankSum=2.327;VQSLOD=-0.2288;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:42:80.44:0,80,1075	0/1:3,3:5:8.64:9,0,17	0/0:43,0:17:48.11:0,48,542	0/0:51,0:31:83.91:0,84,928	0/1:19,3:21:65.91:66,0,146	0/1:17,14:30:98.87:99,0,105	0/1:15,10:23:0.95:1,0,139	0/0:36,0:34:69.15:0,69,765	0/1:12,9:21:33.07:100,0,33	0/0:29,0:29:75.25:0,75,870	0/0:13,0:13:33.11:0,33,459	0/0:29,0:28:61.96:0,62,820	0/0:34,0:34:91.55:0,92,1209	0/0:27,0:27:39.98:0,40,592	0/1:18,10:27:72.79:156,0,73	0/0:28,0:28:71.05:0,71,825	0/0:31,0:31:64.27:0,64,924	0/0:23,0:21:57.49:0,57,702	0/0:20,0:20:45.89:0,46,518	0/0:17,0:15:30.08:0,30,356	0/0:41,0:41:60.19:0,60,760	0/0:11,0:10:20.71:0,21,293	0/0:15,0:13:36.11:0,36,494	0/0:25,0:25:55.92:0,56,695	0/0:21,0:21:49.35:0,49,569	0/0:32,0:30:78.83:0,79,953	0/0:22,0:21:51.28:0,51,568	0/0:9,0:8:24.01:0,24,320
chr10	31856549	.	GT	G	163.55	PASS	AB=0.726;AC=5;AF=0.089;AN=56;BaseQRankSum=7.781;DP=738;FS=5.734;HRun=1;HaplotypeScore=186.7542;InbreedingCoeff=-0.0944;MQ=61.07;MQ0=24;MQRankSum=-0.271;QD=1.59;ReadPosRankSum=4.924;VQSLOD=-0.6871;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:42:76.40:0,76,993	0/1:3,3:5:8.37:8,0,23	0/0:42,0:16:45.60:0,46,546	0/0:49,0:29:68.70:0,69,835	0/1:19,2:21:44.15:44,0,186	0/1:15,11:28:63.67:64,0,148	0/0:14,10:22:16.69:0,17,194	0/0:37,0:35:81.67:0,82,875	0/1:10,6:19:55.29:67,0,55	0/0:33,0:33:91.75:0,92,1112	0/0:14,0:14:34.35:0,34,469	0/0:32,0:31:62.76:0,63,818	0/0:32,0:32:92.46:0,92,1276	0/0:28,0:28:41.19:0,41,607	0/1:17,8:26:95.66:96,0,113	0/0:31,0:30:69.57:0,70,802	0/0:30,0:30:69.93:0,70,950	0/0:23,0:21:56.15:0,56,723	0/0:20,0:20:48.82:0,49,532	0/0:16,0:14:30.53:0,31,363	0/0:42,0:41:57.10:0,57,732	0/0:10,0:9:18.19:0,18,271	0/0:16,0:14:38.71:0,39,511	0/0:23,0:23:51.10:0,51,659	0/0:20,0:20:49.62:0,50,584	0/0:35,0:33:91.24:0,91,1130	0/0:21,0:19:45.62:0,46,597	0/0:11,0:10:24.55:0,25,352
chr10	31856583	.	TTGTGTGTGTG	T	4526.62	PASS	AB=1.000;AC=27;AF=0.482;AN=56;BaseQRankSum=2.795;DP=633;FS=9.379;HRun=0;HaplotypeScore=291.6122;InbreedingCoeff=-0.1676;MQ=38.70;MQ0=25;MQRankSum=-0.764;QD=9.05;ReadPosRankSum=-6.228;VQSLOD=0.8556;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:42,0:38:99:112,0,165	1/1:5,0:4:1.55:4,2,0	0/0:6,0:2:2.99:0,3,24	0/0:10,0:3:3.46:0,3,25	1/1:20,5:24:42.83:393,43,0	1/1:29,0:28:35.53:545,36,0	1/1:23,0:21:30.55:342,31,0	0/0:33,0:24:21.87:0,22,184	1/1:19,0:19:28.73:460,29,0	0/1:33,0:33:54.60:55,0,878	0/1:12,0:12:52.73:77,0,53	0/1:31,0:29:99:332,0,316	0/1:37,0:37:99:205,0,258	0/1:24,0:24:99:306,0,125	1/1:24,0:23:13.64:304,14,0	0/1:34,0:32:19.89:403,0,20	0/1:27,0:27:99:113,0,215	0/1:23,0:21:99:124,0,415	0/0:17,0:15:10.92:0,11,164	0/0:11,0:10:7.31:0,7,214	0/0:39,0:36:23.61:0,24,285	0/1:16,0:15:94.33:224,0,94	0/1:12,0:10:49.34:49,0,51	0/1:22,0:22:19.36:115,0,19	0/1:16,0:16:51.67:102,0,52	0/1:33,0:32:99:201,0,681	0/0:16,0:14:9.91:0,10,340	0/1:12,0:9:60.60:61,0,99
chr10	31856587	.	G	GTGTT	9429.88	PASS	AB=0.974;AC=37;AF=0.661;AN=56;BaseQRankSum=1.770;DP=622;FS=24.919;HRun=0;HaplotypeScore=227.9026;InbreedingCoeff=-0.2458;MQ=39.51;MQ0=22;MQRankSum=-4.138;QD=15.61;ReadPosRankSum=0.640;VQSLOD=2.8235;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:41,0:39:62.63:526,63,0	0/1:5,0:4:17.86:51,0,18	0/0:5,0:2:5.96:0,6,44	0/0:13,0:4:2.97:0,3,23	0/1:25,0:24:69.73:352,0,70	0/1:28,0:27:45.64:147,0,46	1/1:22,0:20:12.54:123,13,0	0/1:33,0:25:68.02:243,0,68	0/1:17,0:17:55.87:139,0,56	0/1:31,0:31:14.50:638,0,14	0/1:11,0:11:19.89:175,0,20	1/1:30,0:28:65.04:781,65,0	1/1:33,0:33:40.74:813,41,0	1/1:21,0:21:34.92:576,35,0	0/1:24,0:23:23.95:24,0,166	1/1:34,0:32:55.14:872,55,0	1/1:28,0:28:38.48:550,38,0	0/1:24,0:22:6.50:392,0,7	0/1:19,0:16:14.63:121,0,15	0/1:11,0:10:22.17:150,0,22	0/1:38,0:35:70.70:71,0,129	1/1:17,0:16:15.81:485,16,0	0/1:10,0:8:7:117,0,7	1/1:21,0:21:25.19:347,25,0	1/1:17,0:17:40.37:384,40,0	0/1:33,1:32:41.32:911,0,41	0/1:8,8:16:58.23:147,0,58	1/1:12,0:9:7.05:295,7,0
chr10	31856589	.	G	GTT	4525.01	PASS	AB=0.948;AC=33;AF=0.589;AN=56;BaseQRankSum=3.280;DP=619;FS=0.816;HRun=1;HaplotypeScore=228.1522;InbreedingCoeff=-0.3615;MQ=39.21;MQ0=22;MQRankSum=-2.873;QD=7.61;ReadPosRankSum=4.759;VQSLOD=1.4682;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:37,4:39:11.16:278,11,0	0/1:5,0:4:14.14:14,0,18	0/0:8,0:4:11.95:0,12,105	0/0:15,0:5:5.98:0,6,51	0/1:24,0:23:68.43:136,0,68	0/1:25,0:24:17.22:66,0,17	0/1:22,1:21:5.92:96,0,6	0/1:32,0:24:76.80:77,0,115	0/1:17,0:17:33.94:37,0,34	0/1:26,2:29:49.22:359,0,49	0/1:11,1:12:38.97:79,0,39	1/1:25,5:28:49.83:392,50,0	1/1:26,4:30:34.49:411,34,0	1/1:16,4:21:16.01:239,16,0	0/1:24,0:23:12.30:12,0,182	1/1:30,4:32:13.61:383,14,0	1/1:26,1:27:36.83:348,37,0	0/1:25,0:23:29.44:210,0,29	0/1:18,0:15:39.30:39,0,90	0/1:10,0:10:45.11:73,0,45	0/1:38,0:35:3.44:3,0,226	0/1:14,3:16:41.03:191,0,41	0/1:8,2:8:18.37:85,0,18	1/1:19,2:21:30.42:272,30,0	0/1:14,3:17:25.30:182,0,25	0/1:26,6:30:99:370,0,117	0/1:18,0:16:51.72:52,0,60	0/1:13,1:11:2.22:120,0,2
chr10	31856590	.	TGTG	T	998.69	PASS	AB=0.838;AC=18;AF=0.321;AN=56;BaseQRankSum=7.144;DP=624;FS=3.328;HRun=0;HaplotypeScore=237.1584;InbreedingCoeff=-0.4891;MQ=39.38;MQ0=22;MQRankSum=-4.199;QD=2.38;ReadPosRankSum=4.850;VQSLOD=2.1805;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:38,1:38:11.84:12,0,297	0/1:4,0:4:9.61:10,0,32	0/0:9,0:4:12.04:0,12,185	0/0:18,0:6:11.87:0,12,174	0/1:15,0:23:99:137,0,113	0/1:16,0:24:37.23:158,0,37	0/1:17,0:21:54.95:98,0,55	0/0:32,0:24:49.52:0,50,611	0/1:9,0:18:73.83:105,0,74	0/0:26,3:29:48.18:0,48,680	0/0:9,3:12:1.45:0,1,134	0/1:24,6:28:99:115,0,241	0/1:24,5:29:54.33:54,0,337	0/1:18,3:21:74.97:75,0,211	0/1:19,0:23:99:108,0,263	0/1:22,10:31:99:104,0,230	0/1:24,3:27:43.72:44,0,187	0/1:21,4:23:11.52:12,0,429	0/0:20,0:17:37.17:0,37,420	0/0:11,0:10:8.93:0,9,149	0/0:38,0:35:35.34:0,35,433	0/1:12,5:16:46.48:46,0,105	0/1:10,0:8:3.65:4,0,64	0/1:20,1:21:31.75:32,0,95	0/0:15,2:17:3.86:0,4,184	0/1:27,5:30:19.35:19,0,464	0/0:18,0:16:22.31:0,22,277	0/1:14,2:13:18.83:19,0,92
chr10	31856592	.	TG	T	261.20	PASS	AB=0.749;AC=5;AF=0.089;AN=56;BaseQRankSum=5.389;DP=625;FS=2.441;HRun=1;HaplotypeScore=227.1638;InbreedingCoeff=-0.1151;MQ=40.72;MQ0=24;MQRankSum=-4.188;QD=2.31;ReadPosRankSum=4.856;VQSLOD=-0.3648;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:38:39.27:0,39,419	0/0:4,0:4:5.69:0,6,46	0/0:16,0:7:18.50:0,19,222	0/0:19,0:8:18.06:0,18,235	0/1:15,9:23:80.38:80,0,130	0/1:16,9:24:40.84:109,0,41	0/1:17,6:21:61.01:99,0,61	0/0:32,0:24:66.67:0,67,627	0/1:9,9:18:54.89:55,0,77	0/0:28,0:28:68.24:0,68,702	0/0:13,0:13:26.61:0,27,195	0/0:28,0:26:40.49:0,40,384	0/0:28,0:28:56.06:0,56,450	0/0:22,0:22:40.63:0,41,319	0/1:18,4:22:35.13:35,0,264	0/0:32,1:31:45.64:0,46,390	0/0:27,0:27:35.47:0,35,235	0/0:25,0:23:35.38:0,35,423	0/0:19,0:16:36.06:0,36,414	0/0:11,0:10:14.34:0,14,160	0/0:35,0:32:41.19:0,41,427	0/0:17,0:16:24.81:0,25,202	0/0:10,0:8:18.77:0,19,115	0/0:21,0:21:22.37:0,22,170	0/0:17,0:17:39.53:0,40,288	0/0:32,0:30:32.12:0,32,580	0/0:19,0:17:19.30:0,19,231	0/0:14,0:12:0.54:0,1,108
chr10	31856624	.	GGTTT	G	12432.61	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=5.362;DP=566;FS=2.140;HRun=0;HaplotypeScore=173.8502;InbreedingCoeff=0.9679;MQ=73.01;MQ0=9;MQRankSum=-8.272;QD=43.17;ReadPosRankSum=5.215;VQSLOD=5.2845;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,24:28:57.03:920,57,0	0/0:3,0:3:9.03:0,9,242	0/0:42,0:22:63.17:0,63,1552	0/0:45,0:31:86.96:0,87,2084	0/0:25,0:25:72.14:0,72,1741	0/0:20,0:20:60.14:0,60,1486	0/0:18,0:18:45.11:0,45,1087	0/0:18,0:18:54.17:0,54,1356	0/0:19,0:19:57.13:0,57,1463	1/1:1,20:21:60.19:1107,60,0	1/1:0,15:15:41.99:717,42,0	1/1:1,23:24:54.12:980,54,0	1/1:3,21:24:57.19:1074,57,0	1/1:2,16:18:45.15:833,45,0	0/0:20,1:21:3.18:0,3,1385	1/1:3,19:20:54.19:1013,54,0	1/1:3,18:21:42.14:795,42,0	1/1:4,8:12:27.05:475,27,0	0/0:16,0:16:39.13:0,39,1005	0/0:9,0:8:24.08:0,24,648	0/0:21,0:20:44.98:0,45,961	1/1:1,20:21:54.03:944,54,0	1/1:1,12:13:27.07:592,27,0	1/1:0,15:16:35.54:519,36,0	1/1:2,11:13:30.10:568,30,0	1/1:4,23:27:72.20:1328,72,0	0/0:21,0:21:51.18:0,51,1368	1/1:0,12:13:33.04:568,33,0
chr10	31856727	.	CTTAG	C	3453.24	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=5.616;DP=586;FS=13.799;HRun=0;HaplotypeScore=142.5560;InbreedingCoeff=0.9553;MQ=83.71;MQ0=0;MQRankSum=-9.878;QD=45.44;ReadPosRankSum=-0.991;VQSLOD=3.3581;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,102,2605	0/0:11,0:11:33.11:0,33,872	0/0:24,0:24:64.76:0,65,1506	0/0:16,0:16:42.14:0,42,995	0/0:24,0:24:66.22:0,66,1643	0/0:20,0:20:57.20:0,57,1445	0/0:23,0:23:63.22:0,63,1650	1/1:6,24:30:78.27:1420,78,0	0/0:18,0:18:45.15:0,45,1188	0/0:30,0:30:84.29:0,84,2211	0/0:28,0:28:78.27:0,78,2048	0/0:19,0:19:51.17:0,51,1278	0/0:27,0:27:75.21:0,75,1858	0/0:17,0:17:51.18:0,51,1345	0/0:19,0:19:51.17:0,51,1253	0/0:26,0:26:66.22:0,66,1678	0/0:39,0:39:96.33:0,96,2505	0/0:20,0:20:45.09:0,45,1054	1/1:7,5:12:21.07:386,21,0	1/1:2,12:14:39.13:717,39,0	1/1:1,1:2:3.01:55,3,0	0/0:15,0:15:39.11:0,39,921	0/0:17,0:17:42.13:0,42,1045	0/0:24,0:24:54.18:0,54,1367	0/0:23,0:23:63.22:0,63,1635	0/0:22,0:22:60.21:0,60,1532	1/1:3,15:18:48.16:875,48,0	0/0:7,0:7:18.06:0,18,459
chr10	31856752	.	T	TA	21652.88	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-5.757;DP=617;FS=3.321;HRun=2;HaplotypeScore=67.0687;InbreedingCoeff=0.9979;MQ=83.95;MQ0=0;MQRankSum=-9.633;QD=37.53;ReadPosRankSum=4.317;VQSLOD=5.5299;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:0,38:38:99:1390,99,0	1/1:0,14:14:36.08:495,36,0	0/0:21,0:22:63.09:0,63,744	0/0:18,0:18:36.11:0,36,437	1/1:1,27:28:78.22:1076,78,0	1/1:0,24:24:69.23:993,69,0	1/1:1,20:21:57.19:821,57,0	1/1:4,25:29:76.14:1081,76,0	1/1:2,19:21:51.17:734,51,0	1/1:2,34:37:99:1464,105,0	1/1:0,29:29:84.24:1187,84,0	1/1:0,19:19:48.16:674,48,0	1/1:1,22:23:60.20:864,60,0	1/1:1,16:17:45.15:640,45,0	1/1:1,15:16:36.12:518,36,0	1/1:0,29:29:69.23:993,69,0	1/1:3,34:37:90.30:1296,90,0	1/1:1,16:17:42.14:598,42,0	1/1:2,12:14:33.11:475,33,0	1/1:1,18:19:54.15:754,54,0	1/1:0,9:9:27.09:388,27,0	1/1:0,12:12:33.11:475,33,0	1/1:1,19:20:48.16:691,48,0	1/1:0,20:20:54.18:777,54,0	1/1:2,23:25:60.20:864,60,0	1/1:0,24:24:72.24:1029,72,0	1/1:3,24:27:72.24:1029,72,0	1/1:0,8:8:24.08:346,24,0
chr10	31856888	.	T	TCC	10530.22	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-14.111;DP=641;FS=1.938;HRun=6;HaplotypeScore=79.8883;InbreedingCoeff=0.9909;MQ=74.77;MQ0=2;MQRankSum=-1.879;QD=34.87;ReadPosRankSum=5.353;VQSLOD=4.5143;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,31:34:69.24:1153,69,0	0/0:7,0:7:18.04:0,18,207	0/0:25,0:24:38.75:0,39,465	0/0:33,0:32:68.19:0,68,776	0/0:24,0:24:63.06:0,63,755	0/0:23,0:23:51.11:0,51,585	0/0:34,0:34:84.21:0,84,997	0/0:29,0:29:16.97:0,17,389	0/0:27,0:27:69.01:0,69,766	1/1:3,21:25:60.17:938,60,0	1/1:2,17:19:35.71:562,36,0	1/1:3,20:23:44.82:761,45,0	1/1:3,24:28:56.54:914,57,0	1/1:0,18:18:36.12:608,36,0	0/0:34,0:33:93.18:0,93,1064	1/1:2,20:23:48.16:812,48,0	1/1:3,27:33:74.26:1226,74,0	1/1:1,6:7:18.06:304,18,0	0/0:22,0:22:51.12:0,51,591	0/0:17,0:17:48.15:0,48,585	0/0:45,0:45:99:0,120,1409	1/1:1,8:9:21.07:355,21,0	1/1:4,25:29:66.12:1102,66,0	1/1:2,23:25:48.16:812,48,0	1/1:1,9:10:21.03:324,21,0	1/1:1,11:12:29.89:458,30,0	0/0:19,0:19:48.10:0,48,549	1/1:0,5:5:12.04:203,12,0
chr10	31859156	.	A	AC	8218.05	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-0.773;DP=573;FS=2.231;HRun=8;HaplotypeScore=84.5202;InbreedingCoeff=0.9699;MQ=74.82;MQ0=0;MQRankSum=-4.183;QD=20.81;ReadPosRankSum=0.087;VQSLOD=4.7047;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,41:45:99:1278,117,0	0/0:8,0:8:21.01:0,21,192	0/0:16,0:17:34.09:0,34,341	0/0:22,0:22:35.84:0,36,309	0/0:31,0:31:77.67:0,78,695	0/0:22,0:22:57.02:0,57,522	0/0:28,0:28:75.03:0,75,686	1/1:13,0:18:20.77:151,21,0	0/0:25,0:25:66.02:0,66,602	1/1:8,17:25:18.12:446,18,0	1/1:1,9:10:20.98:225,21,0	1/1:1,23:25:47.96:534,48,0	1/1:4,18:22:51.14:576,51,0	1/1:8,12:20:36.07:401,36,0	0/0:25,0:25:63.03:0,63,576	1/1:2,26:28:72.16:815,72,0	1/1:7,19:26:26.72:561,27,0	1/1:4,7:11:21.06:242,21,0	1/1:7,0:8:5.82:35,6,0	1/1:5,0:7:11.63:71,12,0	1/1:15,0:23:26.15:160,26,0	1/1:4,17:21:38.95:430,39,0	1/1:3,14:17:35.89:378,36,0	1/1:7,18:25:26.51:512,27,0	1/1:1,18:19:48.01:534,48,0	1/1:3,14:16:42.09:471,42,0	1/1:3,1:12:16.80:84,17,0	1/1:3,9:12:29.97:315,30,0
chr10	31859212	.	ACTCTGTCT	A	8905.59	PASS	AB=1.000;AC=46;AF=0.821;AN=56;BaseQRankSum=7.373;DP=598;FS=1.594;HRun=0;HaplotypeScore=230.4071;InbreedingCoeff=0.2152;MQ=78.79;MQ0=14;MQRankSum=-7.512;QD=19.97;ReadPosRankSum=6.373;VQSLOD=3.9321;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:29:53.47:520,53,0	0/1:13,0:13:72.93:143,0,73	0/0:66,0:39:76.07:0,76,740	0/0:86,0:50:32.39:0,32,538	0/1:20,0:20:58.75:59,0,95	0/1:14,0:14:72.92:132,0,73	0/1:25,0:25:50.94:51,0,105	1/1:13,0:13:36.03:330,36,0	0/1:21,0:21:99:263,0,145	1/1:16,0:16:35.88:434,36,0	1/1:5,0:5:8.74:56,9,0	1/1:29,0:29:62.73:993,63,0	1/1:24,0:24:47.68:781,48,0	1/1:15,0:15:33.08:588,33,0	0/1:23,0:23:86.16:249,0,86	1/1:18,0:18:45.05:662,45,0	1/1:13,0:13:17.96:250,18,0	1/1:9,0:9:23.72:162,24,0	1/1:1,6:7:18.04:325,18,0	1/1:3,12:14:8.71:178,9,0	1/1:3,23:26:5.91:40,6,0	1/1:18,0:18:33.03:475,33,0	1/1:17,0:17:2.05:314,2,0	1/1:21,0:21:23.51:205,24,0	1/1:17,0:17:33.01:483,33,0	1/1:15,0:14:35.94:473,36,0	1/1:4,6:10:20.97:446,21,0	1/1:13,0:13:23.88:294,24,0
chr10	31859213	.	CTCTGTCTCTCTGTCTGTCTG	C	17114.47	PASS	AB=1.000;AC=40;AF=0.714;AN=56;BaseQRankSum=1.900;DP=616;FS=0.438;HRun=0;HaplotypeScore=301.5140;InbreedingCoeff=0.1306;MQ=77.28;MQ0=14;MQRankSum=-6.317;QD=38.99;ReadPosRankSum=6.929;VQSLOD=2.9697;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:26,3:29:53.90:1046,54,0	0/1:16,0:16:99:205,0,150	0/0:65,0:38:75.40:0,75,1124	0/0:85,0:49:34.25:0,34,1186	0/1:21,0:21:80.30:80,0,122	0/1:14,0:14:97.27:183,0,97	0/1:32,0:32:76.65:77,0,105	0/1:13,0:13:19.94:266,0,20	0/1:28,0:28:99:366,0,213	1/1:12,4:16:36.11:1067,36,0	1/1:5,0:5:8.74:56,9,0	1/1:16,13:29:62.73:2445,63,0	1/1:14,10:24:48.09:1946,48,0	1/1:6,9:15:33.10:1571,33,0	0/0:27,0:27:42.01:0,42,504	1/1:10,8:18:45.09:1584,45,0	1/1:9,4:13:21:611,21,0	1/1:9,0:9:23.85:289,24,0	0/1:7,0:7:9.93:10,0,559	0/1:15,0:14:6.97:7,0,180	0/1:26,0:26:16.98:17,0,149	1/1:12,6:18:33.05:1123,33,0	1/1:12,5:17:2.07:881,2,0	1/1:18,3:21:22.94:393,23,0	1/1:11,6:17:33.02:1156,33,0	1/1:9,5:13:36.02:1118,36,0	0/1:10,0:10:19.92:20,0,449	1/1:10,2:12:23.88:600,24,0
chr10	31859221	.	CTCTGTCTGTCTGTCTG	C	11801	PASS	AB=0.769;AC=38;AF=0.704;AN=54;BaseQRankSum=6.233;DP=587;FS=10.737;HRun=0;HaplotypeScore=266.0452;InbreedingCoeff=0.7158;MQ=77.60;MQ0=15;MQRankSum=-3.526;QD=32.16;ReadPosRankSum=5.635;VQSLOD=1.9784;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:26:14.10:398,14,0	1/1:5,11:16:17.06:651,17,0	0/0:61,0:36:14.64:0,15,264	0/0:81,0:45:22.62:0,23,536	1/1:6,14:20:8.82:314,9,0	1/1:5,13:18:15.05:582,15,0	1/1:9,27:36:6.02:258,6,0	0/0:14,0:13:9.03:0,9,273	1/1:9,19:28:27.09:1111,27,0	1/1:14,0:14:18.21:453,18,0	./.	1/1:24,0:25:42.14:1531,42,0	1/1:21,0:21:33.11:1199,33,0	1/1:15,0:15:30.02:985,30,0	0/1:4,0:29:60.41:193,0,60	1/1:16,0:16:27.77:883,28,0	0/1:10,0:10:4.72:315,0,5	1/1:9,0:9:5.29:19,5,0	0/0:7,0:7:18.05:0,18,455	0/0:13,0:13:6.02:0,6,118	0/0:28,0:28:9.03:0,9,352	1/1:15,0:15:18.53:640,19,0	1/1:13,0:13:17.98:542,18,0	1/1:21,0:21:6.02:165,6,0	1/1:14,0:14:20.99:666,21,0	1/1:12,0:11:20.99:568,21,0	0/0:12,0:12:24.08:0,24,671	1/1:9,0:9:9.03:327,9,0
chr10	31859523	.	GTTTTT	G	10426.04	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-7.374;DP=512;FS=6.984;HRun=16;HaplotypeScore=106.9606;InbreedingCoeff=0.9319;MQ=59.78;MQ0=7;MQRankSum=-5.835;QD=26.53;ReadPosRankSum=1.768;VQSLOD=3.7283;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,21:27:34.45:601,34,0	0/0:1,0:7:16.28:0,16,169	0/0:12,0:9:14.53:0,15,180	0/0:9,0:7:8.92:0,9,143	0/0:13,0:22:46.71:0,47,440	0/0:9,0:17:42.07:0,42,455	0/0:4,0:18:33:0,33,321	1/1:8,23:30:38.71:862,39,0	0/0:9,0:14:29.73:0,30,314	1/1:5,16:21:47.94:702,48,0	1/1:2,16:18:39:592,39,0	1/1:4,17:21:45.02:682,45,0	1/1:4,11:15:28.21:410,28,0	1/1:4,20:24:1.62:528,2,0	0/0:3,0:16:32.66:0,33,162	1/1:3,13:16:30:449,30,0	1/1:5,27:31:63.12:980,63,0	1/1:6,10:15:24.32:402,24,0	1/1:10,13:23:43.81:594,44,0	1/1:2,16:18:38.80:556,39,0	1/1:4,6:10:11.51:137,12,0	1/1:6,10:16:17.82:279,18,0	1/1:5,12:16:29.98:466,30,0	1/1:3,10:13:20.97:319,21,0	1/1:3,18:22:41.47:638,41,0	1/1:7,9:19:32.38:438,32,0	1/1:0,20:20:42.14:651,42,0	1/1:0,8:7:9.03:140,9,0
chr10	31860138	.	A	AAG	30804.78	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-0.237;DP=704;FS=2.721;HRun=0;HaplotypeScore=126.3712;InbreedingCoeff=0.9993;MQ=75.25;MQ0=1;MQRankSum=-8.308;QD=45.84;ReadPosRankSum=6.109;VQSLOD=5.6983;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,24:26:63.22:1133,63,0	1/1:0,12:12:33.11:594,33,0	0/0:16,0:16:45.05:0,45,559	0/0:16,0:16:27.04:0,27,334	1/1:2,21:23:51.09:879,51,0	1/1:2,29:32:81.28:1457,81,0	1/1:3,16:20:42.08:719,42,0	1/1:3,29:33:84.23:1347,84,0	1/1:0,22:22:57.20:1025,57,0	1/1:2,27:29:75.26:1348,75,0	1/1:2,24:26:69.24:1239,69,0	1/1:0,21:22:54.19:969,54,0	1/1:1,19:20:54.19:968,54,0	1/1:1,22:23:63.15:1093,63,0	1/1:2,40:42:99:1781,99,0	1/1:0,30:30:87.30:1562,87,0	1/1:0,37:37:99:1781,99,0	1/1:2,17:19:51.17:917,51,0	1/1:1,18:19:57.20:1015,57,0	1/1:2,23:25:66.17:1150,66,0	1/1:0,23:23:63.22:1134,63,0	1/1:2,19:21:51.17:917,51,0	1/1:2,25:27:72.03:1294,72,0	1/1:1,22:23:60.21:1078,60,0	1/1:1,30:32:81.28:1456,81,0	1/1:3,23:26:69.21:1210,69,0	1/1:4,34:38:93.32:1657,93,0	1/1:0,21:21:60.21:1080,60,0
chr10	31860316	.	C	CTGTCCT	33754.59	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-16.414;DP=748;FS=3.654;HRun=0;HaplotypeScore=179.5553;InbreedingCoeff=0.9956;MQ=80.80;MQ0=0;MQRankSum=-21.350;QD=87.67;ReadPosRankSum=1.860;VQSLOD=5.9817;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,33:43:99:3590,105,0	0/0:15,0:15:42.12:0,42,969	0/0:32,0:32:93.32:0,93,2094	0/0:22,0:22:63.22:0,63,1474	0/0:29,0:29:81.28:0,81,1964	0/0:25,0:25:72.20:0,72,1649	0/0:27,0:27:78.25:0,78,1870	0/0:25,0:25:72.24:0,72,1706	0/0:24,0:24:72.23:0,72,1651	1/1:6,17:24:69.24:2436,69,0	1/1:5,6:12:27.05:879,27,0	1/1:5,24:30:75.26:2624,75,0	1/1:3,27:34:78.27:2842,78,0	1/1:6,30:41:99:3675,105,0	0/0:37,0:37:96.33:0,96,2364	1/1:10,24:37:96.33:3409,96,0	1/1:5,11:20:35.98:1290,36,0	1/1:3,8:12:33.11:1205,33,0	0/0:16,0:16:48.15:0,48,1111	0/0:26,0:26:78.22:0,78,1770	0/0:50,0:50:99:0,148,3606	1/1:2,11:14:36.08:1224,36,0	1/1:3,19:22:60.21:2189,60,0	1/1:11,19:31:60.20:2095,60,0	1/1:4,20:24:69.24:2466,69,0	1/1:6,26:34:99:3412,99,0	0/0:35,0:33:99:0,105,2492	1/1:2,2:5:12.04:417,12,0
chr10	31860554	.	GCC	G	3061.99	PASS	AB=0.698;AC=18;AF=0.321;AN=56;BaseQRankSum=-0.748;DP=448;FS=4.037;HRun=11;HaplotypeScore=70.6734;InbreedingCoeff=0.6552;MQ=75.50;MQ0=0;MQRankSum=0.646;QD=16.64;ReadPosRankSum=1.897;VQSLOD=2.5324;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:25:1.25:0,1,344	1/1:3,5:8:12.01:127,12,0	0/1:15,0:15:15.94:16,0,260	0/0:13,0:13:17.32:0,17,192	0/1:1,12:13:9:286,0,9	1/1:1,15:16:39.09:415,39,0	0/1:5,13:18:8.69:286,0,9	0/1:12,5:18:2.35:150,0,2	1/1:2,12:14:33.07:351,33,0	0/0:10,0:11:20.56:0,21,285	0/0:10,0:10:15.05:0,15,230	0/0:18,0:21:47.62:0,48,654	0/0:8,0:17:11.98:0,12,123	0/0:19,0:20:41.55:0,42,516	0/0:2,1:23:5.05:0,5,108	0/0:12,0:13:29.54:0,30,378	0/0:13,0:15:35.09:0,35,476	0/0:16,0:18:47.13:0,47,655	1/1:7,11:18:33.05:351,33,0	1/1:1,13:14:33.06:351,33,0	1/1:5,17:22:39.08:415,39,0	0/0:15,0:16:24.51:0,25,341	0/0:4,0:4:9.03:0,9,130	0/0:23,0:24:44.59:0,45,627	0/0:14,0:15:26.48:0,26,310	0/0:10,0:11:21.05:0,21,284	1/1:4,23:27:48.09:511,48,0	0/0:7,0:7:15.02:0,15,205
chr10	31862012	.	A	AAGGAGGAGGAGG	9208.09	PASS	AB=0.616;AC=33;AF=0.589;AN=56;BaseQRankSum=-5.613;DP=631;FS=10.538;HRun=0;HaplotypeScore=196.4132;InbreedingCoeff=0.6963;MQ=59.92;MQ0=12;MQRankSum=-8.073;QD=26.31;ReadPosRankSum=-1.057;VQSLOD=3.1290;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:18,9:34:18.06:771,18,0	0/0:13,0:12:27.09:0,27,936	0/0:40,0:17:21.03:0,21,674	0/0:43,0:30:33.44:0,33,626	0/0:31,0:31:66.19:0,66,1937	0/0:21,0:21:42.14:0,42,1475	0/0:28,0:27:62.20:0,62,1817	0/1:10,0:28:92.50:92,0,171	0/0:24,0:24:48.60:0,49,1378	1/1:10,6:22:24.08:907,24,0	1/1:12,6:20:6.02:354,6,0	1/1:5,5:13:9.03:418,9,0	1/1:6,11:18:24.08:1346,24,0	1/1:3,8:15:9.03:531,9,0	0/0:33,0:33:72.70:0,73,2308	1/1:13,0:13:15.05:342,15,0	1/1:9,10:24:11.99:508,12,0	1/1:5,4:11:6.02:346,6,0	0/1:7,0:18:56.32:201,0,56	0/1:8,0:20:2.55:3,0,118	0/0:4,0:30:39:0,39,401	1/1:7,11:19:9.03:501,9,0	1/1:6,5:12:3.01:159,3,0	1/1:15,13:33:15.03:731,15,0	1/1:18,0:18:27.06:676,27,0	1/1:12,7:20:30.04:1143,30,0	0/0:3,0:16:33.36:0,33,259	1/1:4,2:8:3.01:177,3,0
chr10	31862076	.	AG	A	3724.60	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=6.746;DP=582;FS=1.813;HRun=4;HaplotypeScore=94.4464;InbreedingCoeff=0.9850;MQ=65.19;MQ0=0;MQRankSum=0.635;QD=32.11;ReadPosRankSum=1.989;VQSLOD=3.9912;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:69.23:0,69,952	1/1:1,7:8:18.05:216,18,0	0/0:27,0:25:59.07:0,59,908	0/0:28,2:26:44.90:0,45,679	1/1:0,18:18:54.17:648,54,0	1/1:0,20:20:60.18:720,60,0	1/1:0,20:20:51.16:612,51,0	0/0:31,0:31:87.17:0,87,1177	1/1:0,22:22:54.15:648,54,0	0/0:18,0:18:54.13:0,54,732	0/0:18,0:18:45.15:0,45,630	0/0:17,0:17:42.14:0,42,588	0/0:23,0:23:57.19:0,57,797	0/0:24,0:24:54.18:0,54,753	1/1:0,28:28:75.15:881,75,0	0/0:25,0:25:72.24:0,72,1007	0/0:29,0:29:57.15:0,57,776	0/0:13,0:13:36.10:0,36,485	0/0:24,0:24:69.20:0,69,931	0/0:16,0:16:48.14:0,48,637	0/0:32,0:32:72.18:0,72,968	0/0:10,0:10:18.06:0,18,251	0/0:12,0:12:36.12:0,36,502	0/0:26,0:26:60.20:0,60,840	0/0:20,0:20:57.12:0,57,774	0/0:21,0:21:63.20:0,63,867	0/0:16,0:16:36.12:0,36,504	0/0:4,0:4:9.03:0,9,124
chr10	31863513	.	G	GTCAAA	6062.52	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=-8.098;DP=865;FS=0.000;HRun=0;HaplotypeScore=154.0101;InbreedingCoeff=0.8802;MQ=73.10;MQ0=6;MQRankSum=-0.173;QD=24.74;ReadPosRankSum=1.828;VQSLOD=4.5259;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:50:99:0,114,1981	1/1:3,10:13:27.09:712,27,0	0/0:63,0:30:11.27:0,11,359	0/1:75,0:44:45.34:45,0,264	1/1:11,27:39:75.22:1738,75,0	1/1:4,14:18:24.08:685,24,0	1/1:14,16:32:12.04:329,12,0	0/0:36,0:36:45.11:0,45,662	1/1:8,20:29:45.15:1284,45,0	0/0:28,0:28:57.19:0,57,1015	0/0:20,0:20:38.98:0,39,651	0/0:34,0:34:66.19:0,66,1129	0/0:29,0:29:66.18:0,66,1117	0/0:42,0:42:96.29:0,96,1655	1/1:7,31:39:45.15:1270,45,0	0/0:13,0:13:24.07:0,24,410	0/0:33,0:33:72.18:0,72,1226	0/0:37,0:37:84.29:0,84,1507	0/0:21,0:20:27.09:0,27,495	0/0:17,0:17:30.09:0,30,516	0/0:31,0:31:66.16:0,66,1082	0/0:23,0:23:54.16:0,54,906	0/0:20,0:20:45.15:0,45,832	0/0:41,0:41:90.24:0,90,1520	0/0:29,0:29:42.14:0,42,766	0/0:27,0:27:45.14:0,45,773	0/0:20,0:20:54.15:0,54,918	0/0:5,0:5:12.04:0,12,222
chr10	31864023	.	CT	C	1318.17	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=14.244;DP=722;FS=5.315;HRun=1;HaplotypeScore=157.0324;InbreedingCoeff=0.9958;MQ=67.55;MQ0=1;MQRankSum=-14.297;QD=12.21;ReadPosRankSum=4.331;VQSLOD=2.7263;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,132,2082	1/1:1,9:10:29.40:185,29,0	0/0:16,0:16:42.07:0,42,553	0/0:17,0:17:45.62:0,46,690	1/1:0,15:15:14.42:92,14,0	1/1:1,15:16:44.11:282,44,0	1/1:0,12:12:29.97:177,30,0	0/0:28,0:28:84.28:0,84,1321	1/1:3,29:32:75.73:513,76,0	0/0:29,0:29:87.29:0,87,1353	0/0:15,0:15:45.15:0,45,719	0/0:44,0:44:99:0,132,2029	0/0:19,0:19:57.16:0,57,863	0/0:46,0:46:99:0,135,2103	1/1:1,22:22:39.13:256,39,0	0/0:25,0:25:72.25:0,72,1146	0/0:25,0:25:72.24:0,72,1151	0/0:32,0:32:93.28:0,93,1430	0/0:24,0:23:63.18:0,63,973	0/0:14,0:14:39.09:0,39,551	0/0:78,0:78:99:0,232,3619	0/0:14,0:14:42.14:0,42,669	0/0:14,0:14:42.13:0,42,648	0/0:42,0:42:99:0,123,1966	0/0:28,0:28:81.28:0,81,1294	0/0:20,0:20:57.19:0,57,890	0/0:28,0:28:81.28:0,81,1294	0/0:10,0:10:27.09:0,27,431
chr10	31864025	.	GGTCCTGCCCCTCA	G	8217.90	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=15.019;DP=717;FS=3.101;HRun=0;HaplotypeScore=310.6207;InbreedingCoeff=0.9966;MQ=66.35;MQ0=1;MQRankSum=-14.230;QD=78.27;ReadPosRankSum=4.367;VQSLOD=4.2776;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,135,7634	1/1:0,9:9:27.09:919,27,0	0/0:14,0:14:42.08:0,42,1998	0/0:18,0:19:56.54:0,57,2891	1/1:0,15:15:15.52:512,16,0	1/1:0,15:15:40.42:1345,40,0	1/1:0,12:12:33.01:1028,33,0	0/0:30,0:30:90.30:0,90,5535	1/1:2,29:31:92.97:2882,93,0	0/0:27,0:27:81.27:0,81,4016	0/0:16,0:16:48.16:0,48,2715	0/0:45,0:45:99:0,135,7489	0/0:17,0:17:51.18:0,51,2961	0/0:45,0:45:99:0,132,7525	1/1:1,22:22:48:1532,48,0	0/0:25,0:25:71.85:0,72,3894	0/0:25,0:25:73.13:0,73,3996	0/0:31,0:31:93.32:0,93,5242	0/0:25,0:24:69.20:0,69,3769	0/0:14,0:14:39.11:0,39,2071	0/0:78,0:78:99:0,232,14814	0/0:14,0:14:42.14:0,42,2389	0/0:14,0:14:42.14:0,42,2365	0/0:43,0:43:99:0,126,6909	0/0:28,0:28:84.28:0,84,4497	0/0:19,0:19:54.18:0,54,2990	0/0:28,0:28:81.28:0,81,5440	0/0:10,0:10:27.09:0,27,1506
chr10	31865564	.	C	CTT	32033.58	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-7.828;DP=626;FS=0.000;HRun=0;HaplotypeScore=66.5096;InbreedingCoeff=0.9803;MQ=77.68;MQ0=2;MQRankSum=-8.746;QD=53.66;ReadPosRankSum=5.804;VQSLOD=5.6537;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,19:19:48.16:974,48,0	1/1:0,10:10:27.09:548,27,0	0/0:16,0:16:45:0,45,614	0/0:12,0:13:11.47:0,11,422	1/1:0,33:33:96.29:1854,96,0	1/1:0,22:22:63.22:1268,63,0	1/1:0,12:12:36.12:732,36,0	1/1:2,33:35:99:1866,102,0	1/1:0,21:21:63.22:1280,63,0	1/1:1,29:32:89.73:1611,90,0	1/1:0,29:29:87.10:1601,87,0	1/1:1,14:16:30.10:610,30,0	1/1:1,27:29:75.26:1504,75,0	1/1:0,26:26:75.26:1524,75,0	1/1:0,24:26:68.99:1399,69,0	1/1:0,26:28:72.25:1463,72,0	1/1:1,20:20:48.16:963,48,0	1/1:3,26:29:72.20:1407,72,0	1/1:1,18:18:54.17:1062,54,0	1/1:0,33:35:96.33:1914,96,0	1/1:0,11:11:30.10:610,30,0	1/1:2,17:20:51.06:952,51,0	1/1:0,26:27:69.24:1402,69,0	1/1:0,11:11:30.10:610,30,0	1/1:0,26:26:75.26:1524,75,0	1/1:0,19:20:60.19:1171,60,0	1/1:0,24:25:72.25:1456,72,0	1/1:0,15:15:36.12:731,36,0
chr10	31867712	.	TACTCATAGCA	T	6856.75	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=12.996;DP=685;FS=1.517;HRun=0;HaplotypeScore=203.1098;InbreedingCoeff=0.9630;MQ=91.62;MQ0=0;MQRankSum=-13.193;QD=64.69;ReadPosRankSum=2.650;VQSLOD=4.9456;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:96.33:0,96,5019	1/1:1,11:12:27.09:829,27,0	0/0:30,0:30:87.30:0,87,4013	0/0:31,0:31:87.30:0,87,3878	1/1:3,19:22:39.13:1284,39,0	1/1:2,21:23:54.19:1779,54,0	1/1:6,14:20:33.11:1087,33,0	0/0:25,0:25:66.23:0,66,3217	1/1:8,21:29:57.20:1877,57,0	0/0:27,0:27:81.28:0,81,4093	0/0:17,0:17:48.16:0,48,2418	0/0:25,0:25:75.24:0,75,3741	0/0:39,0:39:99:0,111,5505	0/0:24,0:24:72.25:0,72,3688	0/0:41,0:40:99:0,111,5865	0/0:34,1:35:3.53:0,4,4968	0/0:23,0:23:69.24:0,69,3387	0/0:11,0:11:33.11:0,33,1635	0/0:20,0:20:60.21:0,60,2980	0/0:20,0:20:57.20:0,57,3019	0/0:36,0:36:99:0,105,5344	0/0:17,0:17:48.16:0,48,2284	0/0:12,0:12:33.10:0,33,1590	0/0:29,0:29:78.27:0,78,4130	0/0:19,0:19:54.19:0,54,2859	0/0:12,0:12:36.12:0,36,1903	0/0:33,0:33:96.33:0,96,4901	0/0:21,0:21:60.21:0,60,3158
chr10	31868984	.	TG	T	5563.40	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=12.785;DP=770;FS=0.689;HRun=2;HaplotypeScore=71.7981;InbreedingCoeff=0.9962;MQ=82.88;MQ0=0;MQRankSum=-0.511;QD=36.84;ReadPosRankSum=-3.662;VQSLOD=3.8672;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,111,1599	0/0:5,0:5:15.04:0,15,205	0/0:28,0:28:81.20:0,81,1096	0/0:17,0:17:44.81:0,45,610	0/0:44,0:44:99:0,132,1975	0/0:34,0:34:99:0,99,1462	0/0:13,0:13:39.13:0,39,584	1/1:0,35:35:99:1336,105,0	0/0:31,0:31:93.31:0,93,1392	0/0:37,0:37:99:0,108,1598	0/0:26,0:26:78.26:0,78,1167	0/0:27,0:27:81.27:0,81,1211	0/0:35,0:35:99:0,102,1506	0/0:31,0:31:93.31:0,93,1390	0/0:34,0:34:96.33:0,96,1439	0/0:26,0:26:75.25:0,75,1106	0/0:30,0:30:90.30:0,90,1341	0/0:10,0:10:30.10:0,30,449	1/1:2,26:28:78.23:995,78,0	1/1:0,32:32:93.30:1207,93,0	1/1:1,26:27:75.24:974,75,0	0/0:24,0:24:72.23:0,72,1059	0/0:31,0:31:93.30:0,93,1371	0/0:15,0:15:45.14:0,45,653	0/0:25,0:25:75.25:0,75,1122	0/0:41,0:41:99:0,123,1807	1/1:0,29:29:81.26:1052,81,0	0/0:17,0:17:51.17:0,51,764
chr10	31869705	.	CAACA	C	22414.10	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=15.899;DP=753;FS=10.032;HRun=0;HaplotypeScore=161.4243;InbreedingCoeff=0.9981;MQ=62.82;MQ0=1;MQRankSum=-5.200;QD=42.53;ReadPosRankSum=7.918;VQSLOD=4.3719;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,30:31:69.17:1212,69,0	1/1:0,13:13:36.51:617,37,0	0/0:35,0:30:84.07:0,84,1822	0/0:25,0:23:54.14:0,54,1238	1/1:2,30:32:75.19:1296,75,0	1/1:1,29:30:75.26:1359,75,0	1/1:1,19:20:42.14:763,42,0	0/0:40,0:40:99:0,102,2442	1/1:2,27:29:66.23:1197,66,0	1/1:2,30:32:90.31:1621,90,0	1/1:0,23:23:60.21:1084,60,0	1/1:1,22:23:54.19:979,54,0	1/1:3,24:27:60.15:1051,60,0	1/1:1,24:25:66.23:1195,66,0	1/1:1,37:38:93.32:1690,93,0	1/1:2,23:25:57.20:1030,57,0	1/1:2,23:24:54.19:982,54,0	1/1:0,13:13:33.04:563,33,0	0/0:19,0:19:51.12:0,51,1123	0/0:53,0:53:99:0,151,3766	0/0:20,0:20:60.19:0,60,1463	1/1:2,32:34:90.24:1578,90,0	1/1:1,22:23:51.06:918,51,0	1/1:1,28:29:54.05:978,54,0	1/1:1,16:17:36.12:654,36,0	1/1:1,25:26:75.25:1322,75,0	0/0:33,0:31:84.27:0,84,2075	1/1:1,11:12:17.15:325,17,0
chr10	31870179	.	G	GAA	515.51	PASS	AB=0.909;AC=3;AF=0.054;AN=56;BaseQRankSum=-1.621;DP=602;FS=2.817;HRun=10;HaplotypeScore=127.7501;InbreedingCoeff=0.7374;MQ=76.01;MQ0=0;MQRankSum=-3.504;QD=9.91;ReadPosRankSum=0.168;VQSLOD=1.2831;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:65.11:0,65,639	0/0:17,0:17:45.05:0,45,448	0/1:27,1:27:2.02:2,0,374	0/0:17,0:15:23.72:0,24,243	0/0:35,0:35:87.13:0,87,871	0/0:22,0:23:56.84:0,57,632	0/0:17,0:17:42.02:0,42,412	0/0:27,0:28:59.47:0,59,626	0/0:26,0:26:69.13:0,69,701	0/0:24,0:25:65.85:0,66,653	0/0:26,0:27:56.44:0,56,535	0/0:20,0:20:42.06:0,42,427	0/0:27,0:28:62.83:0,63,622	0/0:18,0:20:44.55:0,45,491	1/1:1,18:22:41.85:610,42,0	0/0:17,0:17:42.04:0,42,414	0/0:23,0:23:47.58:0,48,539	0/0:19,0:19:45.08:0,45,450	0/0:14,0:14:33.01:0,33,316	0/0:31,0:33:56.45:0,56,603	0/0:7,0:7:15.01:0,15,145	0/0:20,0:20:37.31:0,37,393	0/0:23,0:24:50.80:0,51,564	0/0:14,0:15:35.75:0,36,339	0/0:18,0:18:38.88:0,39,380	0/0:21,0:21:42:0,42,421	0/0:21,0:21:36.47:0,36,446	0/0:7,0:8:17.76:0,18,164
chr10	31870376	.	TTC	T	30749.27	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=3.393;DP=830;FS=1.231;HRun=0;HaplotypeScore=139.0910;InbreedingCoeff=0.9995;MQ=83.16;MQ0=0;MQRankSum=-11.027;QD=39.32;ReadPosRankSum=7.236;VQSLOD=6.3000;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,46:46:99:1805,126,0	1/1:0,12:12:33.11:473,33,0	0/0:34,0:34:95.77:0,96,1572	0/0:14,0:14:32.70:0,33,508	1/1:0,26:26:69.14:942,69,0	1/1:0,18:18:51.17:731,51,0	1/1:1,28:29:78.26:1118,78,0	1/1:1,37:38:99:1568,111,0	1/1:1,22:23:63.21:902,63,0	1/1:1,35:36:99:1493,108,0	1/1:0,26:26:66.22:946,66,0	1/1:0,36:36:99:1461,102,0	1/1:0,32:32:93.31:1332,93,0	1/1:0,31:31:87.29:1247,87,0	1/1:1,37:38:99:1458,102,0	1/1:2,33:35:99:1419,99,0	1/1:0,43:43:99:1504,105,0	1/1:0,10:10:30.10:430,30,0	1/1:1,21:22:63.21:894,63,0	1/1:2,31:33:90.22:1243,90,0	1/1:0,42:42:99:1634,114,0	1/1:3,35:38:99:1462,102,0	1/1:0,28:28:81.27:1161,81,0	1/1:2,33:35:90.30:1290,90,0	1/1:0,22:22:66.22:946,66,0	1/1:1,29:30:84.21:1141,84,0	1/1:1,28:29:78.26:1118,78,0	1/1:0,24:24:72.24:1032,72,0
chr10	31874394	.	A	AGT	12667.01	PASS	AB=0.823;AC=49;AF=0.875;AN=56;BaseQRankSum=-2.969;DP=723;FS=13.102;HRun=0;HaplotypeScore=132.1466;InbreedingCoeff=0.4431;MQ=64.13;MQ0=4;MQRankSum=0.412;QD=19.16;ReadPosRankSum=3.551;VQSLOD=4.2702;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:30:43.76:519,44,0	0/1:8,2:10:23.26:108,0,23	0/0:29,0:17:25.98:0,26,278	0/0:30,0:23:5.53:0,6,214	1/1:12,26:39:60.19:925,60,0	1/1:6,17:24:45.14:689,45,0	1/1:4,15:20:39.13:616,39,0	1/1:30,0:28:20.95:175,21,0	1/1:11,21:33:30.85:915,31,0	1/1:32,0:32:70.95:710,71,0	1/1:29,0:29:57.16:642,57,0	1/1:28,0:28:66.18:740,66,0	1/1:25,0:25:42.11:460,42,0	1/1:23,0:23:54.15:606,54,0	0/1:15,19:35:99:776,0,145	1/1:30,0:30:27.84:622,28,0	1/1:26,0:26:54.15:610,54,0	0/1:14,0:14:2.20:297,0,2	1/1:25,0:24:26.17:207,26,0	1/1:17,0:25:5.91:55,6,0	1/1:20,0:19:5.98:50,6,0	1/1:8,0:8:9.02:98,9,0	1/1:16,0:16:30.08:335,30,0	1/1:33,0:33:72.21:811,72,0	1/1:31,0:31:54.15:611,54,0	1/1:26,0:26:63.15:662,63,0	1/1:20,0:35:28:226,28,0	1/1:13,0:13:18.05:202,18,0
chr10	31874407	.	G	GTA	15775.20	PASS	AB=1.000;AC=38;AF=0.679;AN=56;BaseQRankSum=-9.799;DP=732;FS=20.901;HRun=0;HaplotypeScore=101.7488;InbreedingCoeff=0.4646;MQ=62.86;MQ0=5;MQRankSum=4.972;QD=28.73;ReadPosRankSum=12.535;VQSLOD=3.2661;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,29:34:40.35:797,40,0	0/1:9,0:9:24.76:25,0,122	0/0:43,0:17:34.89:0,35,434	0/0:39,0:26:58.73:0,59,624	0/1:35,0:34:63.11:369,0,63	1/1:23,0:23:0.76:274,1,0	0/1:20,0:20:5.26:247,0,5	0/0:27,0:25:57.64:0,58,485	0/1:33,0:33:99:365,0,131	1/1:1,32:33:78.21:1491,78,0	1/1:3,25:30:57.19:1091,57,0	1/1:0,30:30:66.20:1269,66,0	1/1:3,19:22:41.62:808,42,0	1/1:0,22:23:54.19:1039,54,0	0/1:33,0:33:99:318,0,369	1/1:3,30:34:48.20:1140,48,0	1/1:1,26:27:54.18:1038,54,0	1/1:6,9:15:2.27:562,2,0	0/0:21,0:20:50.52:0,51,378	0/1:14,0:14:8.86:9,0,19	0/0:20,0:19:17.57:0,18,139	1/1:0,9:9:9.03:173,9,0	1/1:0,17:17:30.07:576,30,0	1/1:1,37:38:72.25:1384,72,0	1/1:0,25:25:54.19:1038,54,0	1/1:1,29:30:87.15:1425,87,0	0/0:33,0:33:14.88:0,15,259	1/1:1,14:15:12.11:338,12,0
chr10	31874689	.	CT	C	7458.64	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=5.518;DP=502;FS=1.884;HRun=10;HaplotypeScore=57.5123;InbreedingCoeff=0.9566;MQ=66.03;MQ0=2;MQRankSum=-1.374;QD=20.16;ReadPosRankSum=-0.433;VQSLOD=5.5754;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,31:36:47.51:635,48,0	0/0:10,0:10:27.07:0,27,299	0/0:21,0:14:17.93:0,18,161	0/0:10,0:7:7.82:0,8,63	0/0:30,0:30:87.04:0,87,927	0/0:25,0:25:72.19:0,72,796	0/0:12,0:12:30.07:0,30,322	1/1:6,22:28:35.77:533,36,0	0/0:11,0:11:27.07:0,27,298	1/1:2,12:14:32.97:283,33,0	1/1:0,22:22:59.98:521,60,0	1/1:1,13:14:35.92:304,36,0	1/1:3,10:13:26.98:234,27,0	1/1:1,17:18:47.99:417,48,0	0/0:12,0:12:33.06:0,33,348	1/1:3,17:20:47.99:417,48,0	1/1:5,24:29:57.46:495,57,0	1/1:2,11:13:23.99:208,24,0	1/1:3,17:19:50.94:434,51,0	1/1:1,19:20:56.91:486,57,0	1/1:0,4:4:12:104,12,0	1/1:2,3:5:8.99:78,9,0	1/1:4,9:13:20.93:175,21,0	1/1:3,11:14:32.98:286,33,0	1/1:0,29:29:80.97:703,81,0	1/1:2,26:28:77.98:677,78,0	1/1:3,14:18:7.85:285,8,0	1/1:5,7:12:20.66:182,21,0
chr10	31875210	.	GA	G	2485.83	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=10.965;DP=594;FS=1.330;HRun=7;HaplotypeScore=62.8001;InbreedingCoeff=0.9661;MQ=81.18;MQ0=0;MQRankSum=0.161;QD=24.37;ReadPosRankSum=-2.271;VQSLOD=3.1150;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:69.18:0,69,829	0/0:11,0:11:33.09:0,33,403	0/0:24,2:26:4.79:0,5,487	0/0:16,0:16:29.12:0,29,363	0/0:25,0:25:66.18:0,66,796	0/0:24,0:24:72.22:0,72,894	0/0:7,0:7:15.04:0,15,178	1/1:2,22:25:68.11:641,68,0	0/0:14,0:14:39.12:0,39,480	0/0:31,0:31:84.26:0,84,1036	0/0:26,0:26:69.20:0,69,844	0/0:21,0:21:57.17:0,57,706	0/0:23,0:23:69.19:0,69,842	0/0:19,0:19:51.16:0,51,642	0/0:32,0:32:90.27:0,90,1110	0/0:22,0:22:63.17:0,63,764	0/0:26,0:26:75.10:0,75,893	0/0:14,0:14:33.08:0,33,396	1/1:3,14:17:42.08:422,42,0	1/1:1,26:27:78.09:773,78,0	1/1:1,13:14:39.09:398,39,0	0/0:31,0:31:72.23:0,72,904	0/0:22,0:22:60.61:0,61,737	0/0:13,0:13:39.11:0,39,478	0/0:15,0:15:42.13:0,42,519	0/0:27,0:27:78.20:0,78,943	1/1:5,14:19:42.09:428,42,0	0/0:20,1:21:26.58:0,27,636
chr10	31875800	.	CA	C	13489.13	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=15.568;DP=711;FS=22.559;HRun=3;HaplotypeScore=104.5727;InbreedingCoeff=0.9997;MQ=85.85;MQ0=0;MQRankSum=-4.101;QD=34.77;ReadPosRankSum=5.187;VQSLOD=2.9136;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,28:31:75.23:929,75,0	0/0:15,0:15:42.14:0,42,603	0/0:31,0:31:93.17:0,93,1226	0/0:22,0:22:57.16:0,57,764	0/0:31,0:31:93.28:0,93,1287	0/0:21,0:21:63.21:0,63,905	0/0:22,0:22:66.20:0,66,915	0/0:40,0:40:99:0,120,1728	0/0:23,0:23:69.22:0,69,974	1/1:1,33:34:99:1199,99,0	1/1:0,21:21:60.15:726,60,0	1/1:1,22:23:60.19:744,60,0	1/1:1,35:36:96.30:1190,96,0	1/1:1,18:19:51.16:632,51,0	1/1:0,33:33:99:1227,99,0	1/1:0,29:29:84.26:1041,84,0	1/1:0,22:22:60.19:743,60,0	1/1:0,8:8:24.08:297,24,0	0/0:25,0:25:66.22:0,66,949	0/0:23,0:23:66.18:0,66,927	0/0:39,0:39:99:0,117,1684	1/1:0,23:23:66.21:818,66,0	1/1:1,18:19:54.17:669,54,0	1/1:0,29:29:84.26:1041,84,0	1/1:0,27:27:78.25:967,78,0	1/1:0,23:23:69.22:855,69,0	0/0:31,0:31:90.30:0,90,1296	1/1:0,11:11:33.10:409,33,0
chr10	31876541	.	T	TG	24283.36	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-7.788;DP=737;FS=4.365;HRun=4;HaplotypeScore=69.5601;InbreedingCoeff=0.9999;MQ=78.33;MQ0=0;MQRankSum=-9.606;QD=35.35;ReadPosRankSum=7.499;VQSLOD=4.3443;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:4,42:46:99:1600,117,0	1/1:1,12:13:36.12:490,36,0	0/0:28,0:28:81.21:0,81,902	0/0:22,0:22:63.16:0,63,684	1/1:1,32:33:90.30:1227,90,0	1/1:1,20:21:57.19:776,57,0	1/1:0,32:32:87.29:1190,87,0	1/1:4,44:48:99:1717,132,0	1/1:0,25:25:69.23:943,69,0	1/1:0,42:42:99:1683,126,0	1/1:0,23:23:63.21:861,63,0	1/1:0,17:17:42.14:574,42,0	1/1:2,27:29:66.22:903,66,0	1/1:0,23:23:63.21:862,63,0	1/1:1,24:25:57.19:780,57,0	1/1:0,23:23:51.17:697,51,0	1/1:2,20:22:54.18:735,54,0	1/1:1,16:17:45.15:615,45,0	1/1:2,24:26:75.20:975,75,0	1/1:2,22:24:66.18:881,66,0	1/1:5,33:38:87.29:1190,87,0	1/1:2,20:22:54.18:729,54,0	1/1:2,15:17:45.15:613,45,0	1/1:2,26:28:63.21:862,63,0	1/1:4,23:27:63.21:862,63,0	1/1:1,21:22:66.21:883,66,0	1/1:1,25:26:75.25:1025,75,0	1/1:2,16:18:45.15:613,45,0
chr10	31877421	.	T	TAA	1527.47	PASS	AB=0.933;AC=11;AF=0.196;AN=56;BaseQRankSum=-7.712;DP=544;FS=23.055;HRun=13;HaplotypeScore=103.4252;InbreedingCoeff=0.8163;MQ=76.67;MQ0=3;MQRankSum=-0.573;QD=16.79;ReadPosRankSum=-1.198;VQSLOD=0.5558;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:34.91:0,35,144	1/1:2,7:12:17.02:169,17,0	0/0:46,0:17:16.50:0,16,142	0/0:50,0:26:17.98:0,18,156	1/1:4,11:19:41.61:501,42,0	1/1:2,11:19:35.59:432,36,0	1/1:6,8:17:5.69:333,6,0	0/0:22,0:25:55.96:0,56,490	1/1:2,7:10:20.56:253,21,0	0/0:20,0:19:35.25:0,35,148	0/0:10,0:10:24.63:0,25,104	0/0:16,0:16:26.90:0,27,111	0/0:24,0:24:46.58:0,47,196	0/0:13,0:13:21.87:0,22,92	0/0:3,0:22:43.89:0,44,188	0/1:13,1:14:9.12:9,0,84	0/0:24,0:24:46.63:0,47,196	0/0:18,0:17:32.90:0,33,139	0/0:19,0:23:46.94:0,47,417	0/0:20,0:21:29.74:0,30,299	0/0:2,0:2:2.20:0,2,25	0/0:14,0:14:26.96:0,27,111	0/0:25,0:25:48.92:0,49,204	0/0:9,0:9:21.96:0,22,93	0/0:23,0:23:46.26:0,46,193	0/0:18,0:18:37.12:0,37,152	0/0:28,0:28:38.76:0,39,432	0/0:5,0:5:10.95:0,11,46
chr10	31877432	.	AAAC	A	2040.61	PASS	AB=0.964;AC=28;AF=0.500;AN=56;BaseQRankSum=9.408;DP=583;FS=1.149;HRun=0;HaplotypeScore=115.9032;InbreedingCoeff=0.8410;MQ=74.75;MQ0=5;MQRankSum=0.578;QD=7.70;ReadPosRankSum=5.994;VQSLOD=2.0953;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:21:32.78:126,33,0	0/0:10,0:10:20.88:0,21,329	0/0:57,0:22:44.98:0,45,624	0/0:59,0:27:31.05:0,31,451	0/0:21,0:21:57.13:0,57,836	0/0:21,0:21:48.13:0,48,747	0/0:18,0:18:48.08:0,48,730	0/0:27,0:27:80.69:0,81,1373	0/0:11,0:11:30.06:0,30,458	1/1:19,2:20:27.02:294,27,0	1/1:17,0:17:40.17:189,40,0	1/1:14,0:14:18.01:76,18,0	1/1:23,0:23:42.42:158,42,0	1/1:12,1:13:20.48:107,20,0	0/0:22,0:22:57.10:0,57,584	0/1:12,1:13:19.87:145,0,20	1/1:22,1:23:42.91:195,43,0	1/1:18,1:18:30.46:149,30,0	0/0:29,0:29:81.19:0,81,1345	0/0:18,0:18:54.12:0,54,949	0/0:2,0:2:4.26:0,4,70	1/1:17,0:17:33.62:145,34,0	1/1:25,0:25:41.69:182,42,0	1/1:9,0:9:18.71:68,19,0	1/1:21,0:21:42.93:184,43,0	1/1:21,0:21:30.24:223,30,0	0/0:23,0:23:66.21:0,66,1330	0/1:8,0:8:10.22:24,0,10
chr10	31877433	.	AAC	A	7407.17	PASS	AB=0.542;AC=29;AF=0.518;AN=56;BaseQRankSum=-0.076;DP=580;FS=0.000;HRun=0;HaplotypeScore=88.6151;InbreedingCoeff=0.9302;MQ=74.89;MQ0=5;MQRankSum=1.011;QD=28.27;ReadPosRankSum=5.534;VQSLOD=5.8492;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,21:21:39.13:516,39,0	0/0:10,0:10:20.88:0,21,245	0/0:55,0:22:42.20:0,42,462	0/0:59,0:27:21.59:0,22,363	0/0:22,0:22:59.98:0,60,655	0/0:21,0:21:48.12:0,48,565	0/0:18,0:18:45.10:0,45,548	0/0:27,0:27:70.99:0,71,1047	0/0:11,0:11:30:0,30,330	1/1:2,19:20:57:626,57,0	1/1:0,17:17:44.70:463,45,0	1/1:1,13:14:29.46:365,29,0	1/1:0,23:23:51.17:675,51,0	1/1:1,12:13:24.06:302,24,0	0/0:22,0:22:55.78:0,56,342	0/1:2,10:13:1.75:365,0,2	1/1:2,21:23:51.14:659,51,0	1/1:2,16:17:36.10:461,36,0	0/0:29,0:29:76.93:0,77,1028	0/0:19,0:19:56.69:0,57,771	0/0:2,0:2:3.90:0,4,55	1/1:0,17:17:38.90:448,39,0	1/1:1,24:25:59.30:713,59,0	1/1:0,9:9:24.08:311,24,0	1/1:0,21:21:51.17:674,51,0	1/1:0,20:20:57.09:671,57,0	0/0:20,0:22:63.21:0,63,1008	1/1:0,7:7:12.04:159,12,0
chr10	31877703	.	G	GGT	1929.15	PASS	AB=0.721;AC=29;AF=0.580;AN=50;BaseQRankSum=-4.418;DP=542;FS=0.773;HRun=0;HaplotypeScore=101.2779;InbreedingCoeff=0.0686;MQ=62.99;MQ0=27;MQRankSum=1.072;QD=5.20;ReadPosRankSum=-2.491;VQSLOD=2.6682;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:17,6:27:60.30:114,0,60	0/0:7,0:8:2.84:0,3,14	./.	./.	0/0:16,0:20:14.20:0,14,70	0/0:16,0:28:14.68:0,15,71	0/0:10,0:12:5.68:0,6,28	1/1:24,0:23:6.83:42,7,0	0/0:5,0:9:11.36:0,11,56	0/1:13,7:21:39.70:191,0,40	1/1:13,0:13:2.97:25,3,0	0/1:5,8:14:20.11:121,0,20	0/1:12,3:15:28.39:37,0,28	1/1:13,0:11:7.80:53,8,0	0/0:12,0:16:5.68:0,6,28	1/1:7,1:19:18.01:175,18,0	0/1:20,6:28:20.97:120,0,21	1/1:7,0:7:1.71:3,2,0	1/1:18,0:16:9:79,9,0	1/1:18,1:23:9.01:96,9,0	1/1:26,0:26:8.96:99,9,0	./.	1/1:18,5:23:5.90:88,6,0	0/1:11,10:22:92.48:317,0,92	0/1:8,4:14:26.13:38,0,26	1/1:11,5:19:9.95:269,10,0	0/1:17,9:26:21.75:62,0,22	0/1:9,4:12:67.16:161,0,67
chr10	31878313	.	A	AT	15582.05	PASS	AB=1.000;AC=53;AF=0.946;AN=56;BaseQRankSum=-3.929;DP=470;FS=1.086;HRun=4;HaplotypeScore=58.8893;InbreedingCoeff=0.6644;MQ=77.52;MQ0=0;MQRankSum=-6.122;QD=33.87;ReadPosRankSum=3.434;VQSLOD=5.4257;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,20:22:54.18:738,54,0	1/1:2,7:9:15.05:205,15,0	0/1:9,0:9:8.65:9,0,161	0/0:10,0:10:19.94:0,20,154	1/1:0,27:27:78.26:1066,78,0	1/1:0,16:16:42.14:574,42,0	1/1:1,6:7:14.89:205,15,0	1/1:4,23:27:69.18:893,69,0	1/1:1,10:11:24.08:328,24,0	1/1:1,23:24:69.22:927,69,0	1/1:0,23:23:66.05:836,66,0	1/1:0,12:12:33.11:451,33,0	1/1:1,11:12:33.11:451,33,0	1/1:1,5:6:15.05:205,15,0	1/1:0,16:16:42.14:574,42,0	1/1:2,19:21:42.14:574,42,0	1/1:0,21:21:60.20:820,60,0	1/1:2,15:17:33.11:451,33,0	1/1:5,20:25:60.18:791,60,0	1/1:3,19:22:57.19:780,57,0	1/1:1,15:16:42.14:574,42,0	1/1:1,11:12:36.07:460,36,0	1/1:3,10:13:35.94:444,36,0	1/1:1,7:8:15.05:205,15,0	1/1:1,16:17:45.15:616,45,0	1/1:2,32:34:96.30:1296,96,0	1/1:0,22:22:60.20:821,60,0	1/1:0,11:11:21.07:287,21,0
chr10	31879100	.	C	CA	4038.15	PASS	AB=0.691;AC=51;AF=0.911;AN=56;BaseQRankSum=0.436;DP=496;FS=13.002;HRun=12;HaplotypeScore=101.9255;InbreedingCoeff=0.1633;MQ=51.29;MQ0=12;MQRankSum=-2.553;QD=8.36;ReadPosRankSum=1.472;VQSLOD=1.2246;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:26:17.54:93,18,0	1/1:0,3:3:9.01:87,9,0	1/1:6,0:3:5.30:24,5,0	0/0:13,0:12:7.89:0,8,140	1/1:5,20:24:51.07:490,51,0	0/1:7,7:14:18.30:151,0,18	1/1:7,16:24:4.73:322,5,0	1/1:4,12:17:41.69:369,42,0	0/1:6,11:16:10.80:220,0,11	1/1:12,0:18:15.19:77,15,0	1/1:13,0:18:17.51:76,18,0	1/1:16,0:16:17.08:87,17,0	1/1:13,0:12:13.19:71,13,0	1/1:15,0:15:5.68:29,6,0	1/1:14,0:22:23.07:129,23,0	1/1:10,0:10:12.38:56,12,0	1/1:7,0:11:16.49:81,16,0	1/1:13,0:17:14.04:72,14,0	1/1:12,10:26:3.40:278,3,0	1/1:9,16:25:50.75:466,51,0	0/1:12,4:14:66.56:67,0,67	1/1:10,0:15:14.89:87,15,0	1/1:17,0:16:9.13:56,9,0	1/1:12,0:11:5.68:29,6,0	1/1:14,0:22:17.04:87,17,0	1/1:24,0:25:31.36:172,31,0	1/1:9,14:23:16.95:304,17,0	1/1:4,0:9:11.40:58,11,0
chr10	31879192	.	A	AATGTGTGTGTGT	459	PASS	AB=0.882;AC=7;AF=0.125;AN=56;BaseQRankSum=3.314;DP=676;FS=13.807;HRun=0;HaplotypeScore=248.9182;InbreedingCoeff=-0.0004;MQ=59.71;MQ0=17;MQRankSum=-2.466;QD=3.76;ReadPosRankSum=-5.069;VQSLOD=0.0209;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:61.37:0,61,1316	1/1:5,0:5:0.44:0,0,0	0/0:38,0:13:38.49:0,38,316	0/0:48,0:22:52.36:0,52,519	0/1:29,0:28:72.51:130,0,73	0/1:12,1:18:87.72:88,0,99	0/1:28,0:25:78.58:79,0,265	0/0:18,0:18:14.70:0,15,322	0/1:11,0:19:99:139,0,105	0/0:27,0:29:77.26:0,77,1316	0/0:18,0:20:50.76:0,51,819	0/0:25,0:26:48.39:0,48,885	0/0:18,0:21:53.76:0,54,790	0/0:14,0:15:36.71:0,37,487	0/0:8,0:14:4.86:0,5,264	0/0:18,0:19:53.97:0,54,929	0/0:23,0:24:53.37:0,53,862	0/0:16,0:15:35.94:0,36,516	0/1:22,0:22:99:141,0,391	0/0:15,0:18:18.49:0,18,305	0/0:32,0:40:78.48:0,78,1451	0/0:26,0:26:48.03:0,48,507	0/0:20,0:20:44.15:0,44,496	0/0:23,0:33:34.29:0,34,433	0/0:17,0:19:44.98:0,45,613	0/0:19,0:20:53.61:0,54,550	0/0:23,0:28:47.39:0,47,751	0/0:11,0:13:39.03:0,39,829
chr10	31879410	.	AGTGT	A	4286.18	PASS	AB=0.922;AC=39;AF=0.696;AN=56;BaseQRankSum=3.211;DP=569;FS=2.649;HRun=0;HaplotypeScore=138.3561;InbreedingCoeff=0.5610;MQ=58.57;MQ0=6;MQRankSum=-0.477;QD=9.88;ReadPosRankSum=2.834;VQSLOD=4.0432;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:30:14.54:104,15,0	0/0:4,0:7:6:0,6,76	0/0:24,0:17:15.20:0,15,180	0/0:18,0:10:8.98:0,9,118	0/0:21,0:20:8.39:0,8,126	0/0:27,0:27:14.99:0,15,144	0/0:21,0:21:11.66:0,12,124	0/1:23,10:33:7.62:310,0,8	0/0:9,0:15:6.02:0,6,104	1/1:24,0:24:28.22:272,28,0	1/1:14,0:14:2.87:118,3,0	1/1:19,0:19:29.85:260,30,0	1/1:22,0:22:12.02:117,12,0	1/1:14,0:14:15.02:145,15,0	1/1:20,0:19:24.05:249,24,0	1/1:26,0:26:53.96:500,54,0	1/1:15,0:15:6.19:84,6,0	0/1:19,0:18:52.81:84,0,53	1/1:11,2:13:6.01:74,6,0	1/1:7,17:24:21.07:314,21,0	1/1:9,10:19:0.10:267,0,0	1/1:22,0:22:32.48:266,32,0	1/1:23,0:23:14.75:145,15,0	1/1:16,0:16:4.82:32,5,0	1/1:16,0:15:14.96:135,15,0	1/1:24,0:24:14.09:130,14,0	1/1:13,17:30:39.13:624,39,0	0/1:11,0:10:33.03:58,0,33
chr10	31879435	.	GTGTGTGTGTA	G	3647.77	PASS	AB=0.987;AC=19;AF=0.339;AN=56;BaseQRankSum=8.306;DP=577;FS=2.003;HRun=0;HaplotypeScore=185.9620;InbreedingCoeff=0.1877;MQ=51.32;MQ0=9;MQRankSum=-6.405;QD=11.51;ReadPosRankSum=4.520;VQSLOD=2.3296;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:34,0:34:5.08:124,0,5	0/0:8,0:7:6.02:0,6,187	0/0:24,0:16:32.98:0,33,674	0/0:19,0:11:28.34:0,28,721	0/0:27,0:27:23.11:0,23,613	0/0:23,0:23:24.01:0,24,517	0/0:20,0:20:20.73:0,21,605	0/0:32,0:32:77.82:0,78,912	0/0:13,0:12:11.61:0,12,310	0/1:25,0:25:24.08:443,0,24	0/1:14,0:14:21.78:205,0,22	0/1:20,0:20:0.72:432,0,1	0/1:20,0:20:22.91:159,0,23	1/1:21,0:21:15.05:197,15,0	0/0:18,0:17:24.08:0,24,347	1/1:26,1:27:36.21:722,36,0	0/1:18,0:18:24.90:99,0,25	0/1:20,1:20:99:236,0,158	0/0:12,0:11:21.26:0,21,265	0/0:25,0:25:30.84:0,31,453	0/0:17,0:16:30.07:0,30,519	1/1:24,0:24:11.34:290,11,0	0/1:29,0:29:5.73:170,0,6	0/1:17,2:18:19.63:154,0,20	1/1:17,0:16:17.91:191,18,0	0/1:18,0:18:26.18:199,0,26	0/0:22,0:21:48.03:0,48,761	0/1:10,0:9:27.26:27,0,144
chr10	31879437	.	GTGTGTGTA	G	8155.22	PASS	AB=0.985;AC=29;AF=0.518;AN=56;BaseQRankSum=2.302;DP=576;FS=3.264;HRun=0;HaplotypeScore=155.1306;InbreedingCoeff=0.7284;MQ=51.64;MQ0=9;MQRankSum=-5.477;QD=25.41;ReadPosRankSum=3.161;VQSLOD=4.0516;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,26:32:15.05:373,15,0	0/0:8,0:7:6:0,6,136	0/0:22,0:16:32.58:0,33,615	0/0:18,0:11:23.85:0,24,558	0/0:29,0:29:29.17:0,29,527	0/0:23,0:23:23.98:0,24,367	0/0:20,0:20:20.69:0,21,453	0/0:33,0:33:36.09:0,36,684	0/0:13,0:12:11.61:0,12,259	1/1:5,20:25:53.92:998,54,0	1/1:2,12:14:3.07:359,3,0	1/1:12,7:19:44.82:954,45,0	1/1:3,17:20:12.51:337,13,0	1/1:2,19:21:15.05:418,15,0	0/0:20,0:19:23.40:0,23,138	1/1:13,14:27:69.11:1521,69,0	1/1:2,15:17:6.11:248,6,0	0/1:20,1:20:46.35:373,0,46	0/1:11,0:10:6.39:6,0,151	0/0:25,0:25:34.87:0,35,317	0/0:19,0:18:35.99:0,36,355	1/1:1,23:24:32.92:795,33,0	1/1:7,22:29:14.89:418,15,0	1/1:18,1:18:20.02:268,20,0	1/1:3,13:15:17.93:422,18,0	1/1:3,13:16:32.99:534,33,0	0/0:24,0:23:53.62:0,54,477	0/1:10,0:9:38.99:131,0,39
chr10	31879441	.	GTGTA	G	5005.96	PASS	AB=1.000;AC=36;AF=0.643;AN=56;BaseQRankSum=8.917;DP=543;FS=9.342;HRun=0;HaplotypeScore=131.9881;InbreedingCoeff=0.4759;MQ=54.42;MQ0=9;MQRankSum=-3.646;QD=12.12;ReadPosRankSum=6.576;VQSLOD=2.8682;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:29:14.91:134,15,0	0/0:5,0:4:3.01:0,3,60	0/0:20,0:15:19.27:0,19,392	0/0:18,0:12:27.02:0,27,351	0/0:30,0:30:29.81:0,30,315	0/0:25,0:25:18:0,18,223	0/0:20,0:20:20.21:0,20,293	0/1:30,0:30:67.92:68,0,381	0/0:11,0:10:11.61:0,12,155	1/1:20,0:20:53.90:518,54,0	1/1:14,0:14:14.99:164,15,0	1/1:20,0:20:50.72:495,51,0	1/1:18,0:18:12.04:144,12,0	1/1:20,0:20:15.05:179,15,0	1/1:1,21:21:24.08:439,24,0	1/1:25,0:25:67.78:714,68,0	1/1:15,0:15:9.03:108,9,0	1/1:21,0:20:14.12:313,14,0	0/1:9,0:8:12.09:12,0,86	0/1:25,0:25:97.98:139,0,98	0/1:17,0:16:99:124,0,109	1/1:24,0:24:26.98:296,27,0	1/1:24,0:24:14.78:179,15,0	1/1:17,0:16:22.80:195,23,0	1/1:16,0:15:17.90:182,18,0	1/1:14,0:14:29.95:284,30,0	0/1:24,0:23:60:284,0,60	0/1:9,0:8:23.86:37,0,24
chr10	31880336	.	C	CG	767.72	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-0.011;DP=726;FS=0.000;HRun=3;HaplotypeScore=107.7883;InbreedingCoeff=0.9968;MQ=84.13;MQ0=0;MQRankSum=-1.381;QD=28.43;ReadPosRankSum=2.051;VQSLOD=2.8496;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,105,1213	0/0:14,0:14:36.10:0,36,421	0/0:30,0:30:78.24:0,78,929	0/0:17,0:17:24.17:0,24,372	0/0:24,0:24:72.21:0,72,852	0/0:23,0:23:66.19:0,66,778	0/0:25,0:25:72.20:0,72,851	0/0:29,0:29:75.22:0,75,890	0/0:25,0:25:66.20:0,66,792	0/0:31,0:31:87.18:0,87,972	0/0:26,0:26:75.21:0,75,861	0/0:36,0:36:96.22:0,96,1083	0/0:30,0:30:87.25:0,87,1009	0/0:33,0:33:96.29:0,96,1119	1/1:2,25:27:63.21:863,63,0	0/0:18,0:18:51.15:0,51,595	0/0:30,0:29:87.26:0,87,1013	0/0:20,0:20:54.12:0,54,611	0/0:27,0:27:75.23:0,75,897	0/0:26,0:26:75.23:0,75,898	0/0:24,0:24:69.21:0,69,827	0/0:25,0:25:72.20:0,72,820	0/0:25,0:25:69.19:0,69,785	0/0:33,0:33:99:0,99,1129	0/0:15,0:15:39.12:0,39,455	0/0:25,0:25:66.07:0,66,717	0/0:41,0:41:99:0,114,1326	0/0:10,0:10:27.08:0,27,315
chr10	31880926	.	T	TC	420.59	PASS	AB=0.907;AC=4;AF=0.154;AN=26;BaseQRankSum=-4.057;DP=179;FS=1.794;HRun=0;HaplotypeScore=50.3238;InbreedingCoeff=-0.2213;MQ=69.05;MQ0=17;MQRankSum=1.813;QD=6.57;ReadPosRankSum=-0.470;VQSLOD=3.1835;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/0:6,0:6:14.38:0,14,96	0/0:29,0:9:15.50:0,16,137	0/0:26,0:9:15.78:0,16,139	0/0:8,0:6:1.26:0,1,18	0/0:5,0:5:14.98:0,15,126	0/0:8,0:8:21:0,21,186	0/1:7,10:16:12.37:192,0,12	0/0:13,0:12:23.82:0,24,196	./.	./.	./.	0/0:2,0:1:2.98:0,3,21	./.	./.	./.	./.	./.	0/1:20,0:18:62.21:177,0,62	0/1:16,0:14:39.37:39,0,140	0/1:11,0:11:37:105,0,37	./.	./.	./.	./.	./.	0/0:12,0:12:3.67:0,4,120	./.
chr10	31881018	.	G	GAACCAC	1152.53	PASS	AB=0.856;AC=10;AF=0.179;AN=56;BaseQRankSum=-0.255;DP=387;FS=2.437;HRun=0;HaplotypeScore=123.6596;InbreedingCoeff=-0.0114;MQ=70.03;MQ0=1;MQRankSum=-6.856;QD=13.40;ReadPosRankSum=-0.236;VQSLOD=2.8073;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:15:31.92:0,32,443	0/0:8,0:8:24.08:0,24,576	0/0:17,0:18:48.14:0,48,1028	0/0:18,0:18:36.52:0,37,774	0/0:18,0:18:54.19:0,54,1273	0/0:18,0:18:41.99:0,42,865	0/0:19,0:19:51.15:0,51,1110	0/0:19,0:18:2.06:0,2,557	0/0:15,0:15:39.13:0,39,936	0/0:18,0:17:17.10:0,17,555	0/0:12,2:11:18.04:0,18,256	0/1:3,2:5:58.39:156,0,58	0/1:10,2:11:99:156,0,168	0/1:7,1:8:65.55:66,0,170	1/1:4,5:7:9.50:251,10,0	0/1:12,2:13:99:177,0,241	0/1:8,0:7:7.15:7,0,116	0/1:7,0:7:36.70:37,0,51	0/0:24,0:23:28.18:0,28,744	0/0:19,0:19:57.19:0,57,867	0/0:18,0:18:21.62:0,22,627	0/0:9,0:9:21.07:0,21,326	0/0:12,3:13:21.35:0,21,345	0/1:6,2:8:41.52:160,0,42	0/1:9,6:12:99:289,0,331	0/0:11,0:11:24.08:0,24,383	0/0:21,0:21:34.20:0,34,881	0/0:3,0:3:9.03:0,9,132
chr10	31881021	.	T	TGAAC	1407.68	PASS	AB=0.883;AC=16;AF=0.286;AN=56;BaseQRankSum=4.866;DP=395;FS=10.646;HRun=0;HaplotypeScore=105.7034;InbreedingCoeff=-0.4004;MQ=67.41;MQ0=1;MQRankSum=-6.949;QD=8.04;ReadPosRankSum=-4.899;VQSLOD=-0.2127;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:16,0:15:56.39:56,0,246	0/0:9,0:9:27.08:0,27,527	0/0:19,0:18:51.11:0,51,879	0/0:17,0:17:30.87:0,31,689	0/0:19,0:19:54.19:0,54,1127	0/0:18,0:18:53.76:0,54,849	0/0:18,0:18:54.03:0,54,926	0/0:19,0:18:27.11:0,27,478	0/0:15,0:15:42.08:0,42,830	0/0:20,0:19:6.69:0,7,390	0/1:12,2:11:72.03:72,0,85	0/1:3,2:5:59.09:113,0,59	0/1:9,2:10:99:155,0,131	0/1:5,1:6:70.22:70,0,115	0/1:4,5:7:17.62:206,0,18	0/1:13,2:14:99:159,0,195	0/1:8,0:7:25.95:26,0,87	0/1:8,0:8:46.29:120,0,46	0/0:26,0:25:16.13:0,16,492	0/0:19,0:19:54.60:0,55,573	0/1:20,0:20:9.87:10,0,417	0/1:9,0:9:38.95:39,0,133	0/1:12,4:14:99:129,0,135	0/1:6,2:8:89.07:109,0,89	0/1:9,6:12:99:243,0,157	0/1:12,0:12:18.96:19,0,222	0/0:21,0:21:42.15:0,42,616	0/1:3,0:3:23.47:40,0,23
chr10	31881989	.	GC	G	299.26	PASS	AC=6;AF=0.130;AN=46;BaseQRankSum=0.986;DP=301;FS=0.000;HRun=1;HaplotypeScore=29.2730;InbreedingCoeff=0.5067;MQ=22.15;MQ0=90;MQRankSum=0.287;QD=12.47;ReadPosRankSum=-0.804;VQSLOD=1.5599;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/0:8,0:7:6.02:0,6,82	0/0:15,0:1:3.01:0,3,48	./.	0/0:11,0:8:5.71:0,6,95	0/0:14,0:7:21.07:0,21,332	0/0:14,0:6:9.03:0,9,143	./.	0/0:10,0:7:6.02:0,6,96	0/0:8,0:7:15.05:0,15,239	0/0:5,0:3:2.85:0,3,48	0/0:21,0:11:9.03:0,9,143	0/0:6,0:5:9.03:0,9,143	0/0:13,0:8:9.03:0,9,143	0/0:9,0:9:15.05:0,15,240	0/0:5,0:3:6.02:0,6,92	0/0:8,0:4:6.02:0,6,96	0/0:7,0:3:3.01:0,3,48	1/1:1,4:1:3.01:42,3,0	1/1:0,10:6:9.03:125,9,0	./.	0/0:18,0:15:12.04:0,12,191	./.	0/0:11,0:7:3.01:0,3,48	0/0:14,0:14:27.09:0,27,430	0/0:15,0:12:36.12:0,36,574	1/1:0,9:7:18.06:250,18,0	0/0:9,0:7:15.05:0,15,238
chr10	31882103	.	G	GGCCCT	4013.48	PASS	AC=36;AF=0.692;AN=52;BaseQRankSum=-1.158;DP=318;FS=4.260;HRun=0;HaplotypeScore=34.9567;InbreedingCoeff=0.6006;MQ=33.82;MQ0=51;MQRankSum=0.373;QD=21.24;ReadPosRankSum=0.273;VQSLOD=2.2456;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,10:8:21.07:589,21,0	0/0:4,0:2:3.01:0,3,60	0/0:11,0:2:3.01:0,3,48	0/0:15,0:1:3.01:0,3,49	0/0:11,0:10:2.99:0,3,61	0/0:14,0:10:11.83:0,12,194	0/0:32,0:25:44.73:0,45,783	1/1:1,2:3:5.99:111,6,0	0/0:15,0:7:9.03:0,9,152	1/1:1,3:2:6.02:181,6,0	1/1:1,3:3:3.01:71,3,0	1/1:6,15:12:15.05:431,15,0	1/1:3,7:4:9.03:270,9,0	1/1:6,14:7:9.03:270,9,0	0/0:13,0:8:12.04:0,12,241	1/1:1,5:4:6.02:180,6,0	1/1:1,7:6:12.04:360,12,0	1/1:1,6:3:9.03:196,9,0	1/1:2,1:1:3.01:90,3,0	./.	1/1:6,5:8:6.49:128,6,0	1/1:1,5:3:6.02:141,6,0	./.	1/1:6,5:5:2.96:19,3,0	1/1:2,7:7:9.03:270,9,0	1/1:5,7:8:18.05:436,18,0	1/1:1,12:5:3.01:88,3,0	1/1:4,2:2:6.02:180,6,0
chr10	31882963	.	AT	A	12003.78	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-5.914;DP=534;FS=7.288;HRun=9;HaplotypeScore=60.2683;InbreedingCoeff=0.9828;MQ=68.62;MQ0=0;MQRankSum=-4.629;QD=23.82;ReadPosRankSum=4.499;VQSLOD=5.5314;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,43:50:99:1180,129,0	1/1:0,7:7:21.01:192,21,0	0/0:17,0:14:23.77:0,24,259	0/0:13,0:12:19.37:0,19,172	1/1:1,29:30:86.95:780,87,0	1/1:2,22:24:66.03:604,66,0	1/1:2,14:16:36.02:329,36,0	1/1:2,17:19:51.03:467,51,0	1/1:1,15:16:45.02:412,45,0	1/1:5,24:28:71.95:649,72,0	1/1:0,6:7:20.05:171,20,0	1/1:0,15:15:45.02:412,45,0	1/1:1,6:7:18.01:165,18,0	1/1:2,14:17:38.05:335,38,0	1/1:1,17:17:48.02:439,48,0	1/1:0,9:9:24.01:220,24,0	1/1:2,22:24:66.03:604,66,0	1/1:5,30:35:84.04:769,84,0	1/1:6,16:22:48.01:439,48,0	1/1:3,11:14:30.01:274,30,0	1/1:2,17:19:46.80:437,47,0	1/1:0,17:17:45.02:412,45,0	1/1:1,10:11:27.01:247,27,0	1/1:1,25:26:75.04:686,75,0	1/1:2,23:25:60.03:549,60,0	1/1:1,20:21:60.02:545,60,0	1/1:0,19:19:54.03:494,54,0	1/1:0,7:7:21.01:192,21,0
chr10	31883983	.	AT	A	9257.40	PASS	AB=0.759;AC=52;AF=0.929;AN=56;BaseQRankSum=-3.069;DP=485;FS=4.039;HRun=10;HaplotypeScore=92.8080;InbreedingCoeff=-0.0262;MQ=72.80;MQ0=0;MQRankSum=-1.485;QD=19.09;ReadPosRankSum=3.184;VQSLOD=5.5534;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,21:23:28.32:375,28,0	1/1:2,4:6:11.99:104,12,0	0/1:15,1:16:10.78:11,0,69	0/1:6,0:7:15.79:16,0,22	1/1:4,15:19:38.96:337,39,0	1/1:1,16:18:53.03:448,53,0	1/1:2,10:12:32.98:283,33,0	1/1:7,23:30:38.78:562,39,0	1/1:2,15:17:44.99:391,45,0	1/1:7,27:34:80.97:703,81,0	1/1:2,19:22:53.02:449,53,0	1/1:5,7:12:26.97:232,27,0	1/1:2,14:16:42.46:366,42,0	1/1:3,8:11:23.99:208,24,0	1/1:8,16:24:53.96:468,54,0	1/1:3,10:13:35.96:306,36,0	1/1:6,22:28:68.98:598,69,0	0/1:3,4:7:18.16:89,0,18	1/1:4,10:14:29.98:257,30,0	1/1:3,21:25:65.01:552,65,0	1/1:2,8:10:21:182,21,0	1/1:2,15:18:47.03:397,47,0	1/1:3,24:27:59.83:521,60,0	1/1:1,8:9:14.99:130,15,0	1/1:3,13:16:41.99:364,42,0	0/1:6,16:22:12.38:363,0,12	1/1:3,12:15:29.98:259,30,0	1/1:0,13:13:32.99:286,33,0
chr10	31884035	.	G	GTTTTT	14545.93	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=2.880;DP=433;FS=15.439;HRun=2;HaplotypeScore=138.5445;InbreedingCoeff=0.8661;MQ=54.81;MQ0=0;MQRankSum=-4.835;QD=36.83;ReadPosRankSum=3.711;VQSLOD=0.9204;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:17,9:29:72.37:1165,72,0	1/1:2,0:4:7.80:68,8,0	0/0:21,0:18:39.07:0,39,831	0/0:16,0:12:20.53:0,21,422	1/1:1,0:16:31.43:208,31,0	1/1:5,0:20:31.56:330,32,0	1/1:3,0:18:47.93:332,48,0	1/1:11,0:22:51.28:669,51,0	1/1:4,0:17:44.45:330,44,0	1/1:13,8:23:63.20:1201,63,0	1/1:12,5:20:50.16:894,50,0	1/1:2,3:6:12.04:228,12,0	1/1:3,3:10:30.07:540,30,0	1/1:3,3:9:27.08:500,27,0	1/1:8,0:25:50.07:772,50,0	1/1:4,10:16:35.12:885,35,0	1/1:9,6:16:39.74:730,40,0	1/1:1,2:3:9.03:226,9,0	1/1:8,1:12:29.61:398,30,0	1/1:10,0:21:57.92:766,58,0	1/1:3,0:5:8.64:92,9,0	1/1:2,6:11:27.09:629,27,0	1/1:13,6:21:51.98:981,52,0	1/1:4,2:7:10.93:253,11,0	1/1:7,12:24:54.16:1087,54,0	1/1:12,1:14:30.48:495,30,0	1/1:8,0:13:36.03:498,36,0	1/1:5,1:8:14.58:270,15,0
chr10	31884650	.	G	GA	7828.12	PASS	AB=0.663;AC=50;AF=0.893;AN=56;BaseQRankSum=-1.764;DP=530;FS=7.492;HRun=11;HaplotypeScore=112.0066;InbreedingCoeff=0.4477;MQ=57.09;MQ0=10;MQRankSum=-0.544;QD=15.05;ReadPosRankSum=3.062;VQSLOD=4.6800;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,24:30:57.42:560,57,0	1/1:3,8:12:3.66:203,4,0	0/0:3,0:3:5.01:0,5,27	0/0:6,0:5:14.68:0,15,102	0/1:11,17:27:21.73:313,0,22	1/1:4,14:17:20.90:238,21,0	1/1:3,10:13:3.82:218,4,0	1/1:19,1:26:54.40:297,54,0	1/1:3,12:15:22.88:239,23,0	1/1:19,16:35:20.28:552,20,0	1/1:8,7:14:31.20:276,31,0	1/1:4,8:14:14.86:136,15,0	1/1:10,8:18:28.27:262,28,0	1/1:9,10:17:25.35:293,25,0	1/1:7,11:18:29.03:301,29,0	1/1:4,14:18:41.92:408,42,0	1/1:9,19:28:40.20:600,40,0	1/1:3,22:26:38.24:418,38,0	1/1:14,0:13:14.16:70,14,0	1/1:23,0:28:32.96:175,33,0	1/1:4,0:5:2.88:15,3,0	1/1:8,15:23:35.87:373,36,0	1/1:5,13:18:33.51:326,34,0	1/1:1,13:16:38.75:362,39,0	0/1:11,8:18:24.84:291,0,25	1/1:5,15:20:25.64:377,26,0	1/1:18,0:22:37.22:194,37,0	1/1:0,14:14:33.07:333,33,0
chr10	31885593	.	CTT	C	17155.93	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=6.431;DP=643;FS=0.000;HRun=4;HaplotypeScore=262.0063;InbreedingCoeff=0.9968;MQ=61.48;MQ0=0;MQRankSum=-6.295;QD=28.31;ReadPosRankSum=5.597;VQSLOD=2.9182;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,36:43:99:1091,105,0	1/1:3,10:13:39:401,39,0	0/0:19,0:18:46.38:0,46,725	0/0:18,0:18:24.54:0,25,620	1/1:4,18:22:53.73:589,54,0	1/1:6,28:34:84.18:976,84,0	1/1:2,15:17:47.88:385,48,0	1/1:12,21:33:69.09:651,69,0	1/1:4,22:26:66.07:709,66,0	1/1:4,20:24:66.01:757,66,0	1/1:2,17:19:51.09:582,51,0	1/1:2,15:18:47.99:536,48,0	1/1:2,23:25:72.02:740,72,0	1/1:5,15:20:51.04:556,51,0	1/1:5,24:29:72.03:744,72,0	1/1:1,22:23:66.14:766,66,0	1/1:2,14:16:39.10:461,39,0	1/1:2,7:9:24.04:275,24,0	1/1:4,17:21:51.11:573,51,0	1/1:2,30:32:93.17:1046,93,0	1/1:5,18:23:51.10:600,51,0	1/1:2,20:22:58.92:693,59,0	1/1:2,16:18:51.01:538,51,0	1/1:4,14:18:41.99:468,42,0	1/1:2,19:21:60.08:655,60,0	1/1:6,29:35:90.19:1033,90,0	1/1:1,35:37:99:1039,107,0	1/1:0,8:8:24.07:291,24,0
chr10	31885598	.	G	GC	17730.72	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=6.304;DP=586;FS=0.000;HRun=0;HaplotypeScore=237.5008;InbreedingCoeff=0.9975;MQ=63.41;MQ0=0;MQRankSum=-4.994;QD=32.59;ReadPosRankSum=6.537;VQSLOD=3.7510;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,36:39:99:1198,104,0	1/1:1,10:11:30.94:346,31,0	0/0:21,0:20:47.17:0,47,577	0/0:21,0:21:41.31:0,41,585	1/1:1,18:19:48.05:602,48,0	1/1:1,28:29:87.21:1019,87,0	1/1:0,15:15:44.94:375,45,0	1/1:0,22:22:66.12:659,66,0	1/1:1,22:23:64.37:712,64,0	1/1:3,21:24:67.40:806,67,0	1/1:1,17:18:54.10:613,54,0	1/1:1,15:16:48.03:549,48,0	1/1:1,23:24:72.08:775,72,0	1/1:0,16:16:48.10:565,48,0	1/1:1,24:25:72.09:764,72,0	1/1:2,22:24:72.04:836,72,0	1/1:0,14:14:39.10:474,39,0	1/1:1,7:8:24.03:281,24,0	1/1:0,17:17:51.12:582,51,0	1/1:1,31:32:91.54:1089,92,0	1/1:2,18:20:51.14:631,51,0	1/1:1,20:21:63.12:758,63,0	1/1:0,16:16:47.75:517,48,0	1/1:1,14:15:36.09:451,36,0	1/1:2,19:21:63.10:693,63,0	1/1:1,29:30:87.21:1020,87,0	1/1:1,36:37:99:1116,111,0	1/1:0,8:8:24.08:301,24,0
chr10	31886780	.	TAAAAC	T	15790.27	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-1.348;DP=608;FS=3.653;HRun=0;HaplotypeScore=127.6305;InbreedingCoeff=0.9449;MQ=72.25;MQ0=3;MQRankSum=-2.591;QD=28.81;ReadPosRankSum=5.107;VQSLOD=4.2508;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,18:22:30.10:559,30,0	1/1:3,5:8:12.04:224,12,0	0/0:29,0:24:26.03:0,26,533	0/0:31,0:17:14.76:0,15,231	1/1:10,22:32:50.97:779,51,0	1/1:5,14:19:36.12:671,36,0	1/1:13,15:28:29.46:512,29,0	1/1:15,14:29:38.88:493,39,0	1/1:11,16:27:39.13:727,39,0	1/1:8,11:19:36.08:623,36,0	1/1:8,14:22:36.04:632,36,0	1/1:4,11:15:33.11:615,33,0	1/1:3,11:14:21.07:392,21,0	1/1:7,14:21:27.09:504,27,0	1/1:6,20:26:45.15:839,45,0	1/1:4,14:18:39.13:727,39,0	1/1:3,19:22:36.12:671,36,0	1/1:5,7:12:21.07:377,21,0	1/1:6,15:21:45.10:716,45,0	1/1:7,21:28:56.99:949,57,0	1/1:6,10:16:24.08:448,24,0	1/1:8,10:18:18.06:336,18,0	1/1:3,12:15:14.93:280,15,0	1/1:2,12:14:18.06:336,18,0	1/1:2,21:23:51.17:951,51,0	1/1:13,24:37:75.19:1255,75,0	1/1:14,20:34:47.57:895,48,0	1/1:0,8:8:15.05:280,15,0
chr10	31888612	.	C	CAAT	14732.62	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=11.316;DP=493;FS=1.975;HRun=0;HaplotypeScore=118.8391;InbreedingCoeff=0.9818;MQ=74.98;MQ0=0;MQRankSum=-13.209;QD=40.59;ReadPosRankSum=-1.782;VQSLOD=5.5773;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,10:16:35.48:696,35,0	0/0:10,0:10:27.09:0,27,410	0/0:13,0:13:19.85:0,20,222	0/0:16,0:17:39.88:0,40,564	0/0:19,0:19:42.14:0,42,638	0/0:26,0:26:60.20:0,60,910	0/0:18,0:18:42.14:0,42,636	1/1:19,10:29:48.14:876,48,0	0/0:27,0:27:72.21:0,72,1052	1/1:6,12:18:39.13:814,39,0	1/1:5,13:18:30.10:617,30,0	1/1:4,12:17:33.11:625,33,0	1/1:3,6:9:15.05:314,15,0	1/1:3,28:31:81.28:1660,81,0	1/1:4,12:16:36.12:745,36,0	1/1:4,11:15:33.11:690,33,0	1/1:8,9:16:30.06:510,30,0	1/1:5,6:11:24.08:476,24,0	1/1:7,9:15:33.11:666,33,0	1/1:2,17:20:51.13:990,51,0	1/1:5,3:8:9.03:188,9,0	1/1:7,15:23:45.15:882,45,0	1/1:10,7:18:30.09:537,30,0	1/1:5,9:14:18.53:366,19,0	1/1:2,12:14:39.13:793,39,0	1/1:8,14:22:48.16:1004,48,0	1/1:3,18:21:45.15:934,45,0	1/1:4,6:10:18.06:351,18,0
chr10	31888720	.	ATCTCTCTCTCTCTC	A	2043.69	PASS	AB=0.916;AC=24;AF=0.480;AN=50;BaseQRankSum=4.851;DP=419;FS=25.211;HRun=0;HaplotypeScore=182.0825;InbreedingCoeff=0.6068;MQ=61.21;MQ0=8;MQRankSum=-1.786;QD=10.87;ReadPosRankSum=1.321;VQSLOD=1.0021;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:14,2:16:8.99:185,9,0	0/0:3,0:4:3.01:0,3,103	0/0:17,0:10:6.02:0,6,78	0/0:26,0:12:3.90:0,4,40	0/0:16,0:16:9.03:0,9,379	0/0:8,0:10:12.04:0,12,247	0/0:23,0:24:15.05:0,15,450	0/0:30,0:29:12.51:0,13,536	0/0:9,0:14:9.92:0,10,249	0/1:15,1:16:14.73:116,0,15	0/1:8,5:12:0:0,0,0	1/1:5,7:12:9.02:92,9,0	1/1:13,2:18:11.66:429,12,0	./.	0/0:17,0:19:18.95:0,19,762	1/1:15,6:21:15.02:338,15,0	1/1:6,2:10:12:341,12,0	1/1:11,1:12:6.01:146,6,0	0/0:16,0:14:8.99:0,9,243	./.	0/1:15,0:14:0:0,0,0	1/1:5,2:9:3.01:56,3,0	./.	0/1:8,0:8:0:0,0,0	1/1:12,1:13:3.01:34,3,0	1/1:8,1:11:14.94:374,15,0	0/0:18,0:19:24.97:0,25,1402	1/1:13,0:14:3.01:98,3,0
chr10	31888783	.	TGC	T	1164.42	PASS	AB=0.903;AC=32;AF=0.800;AN=40;BaseQRankSum=2.934;DP=258;FS=2.734;HRun=0;HaplotypeScore=96.9720;InbreedingCoeff=0.1945;MQ=44.16;MQ0=2;MQRankSum=-0.517;QD=6.13;ReadPosRankSum=3.102;VQSLOD=2.8085;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	1/1:2,0:2:5.86:36,6,0	0/0:12,0:5:3:0,3,29	0/0:12,0:4:3.01:0,3,39	1/1:19,0:19:17.77:185,18,0	1/1:13,0:13:2.96:19,3,0	1/1:31,0:31:2.52:207,3,0	1/1:10,0:10:11.91:88,12,0	0/1:18,0:18:41.31:45,0,41	1/1:9,0:9:5.96:49,6,0	./.	1/1:13,0:13:4.56:33,5,0	1/1:9,0:9:10.19:72,10,0	0/1:4,1:5:1.53:6,0,2	./.	./.	1/1:10,1:10:11.95:97,12,0	1/1:3,0:2:2.98:21,3,0	0/1:11,1:8:8.77:88,0,9	./.	1/1:6,1:7:0.47:1,0,0	0/1:5,1:6:0:0,0,0	./.	./.	./.	1/1:14,0:14:8.33:218,8,0	1/1:3,0:3:5.93:49,6,0	1/1:5,0:5:5.48:58,5,0
chr10	31888793	.	CGT	C	1353.41	PASS	AB=1.000;AC=27;AF=0.750;AN=36;BaseQRankSum=1.233;DP=243;FS=3.760;HRun=0;HaplotypeScore=86.0985;InbreedingCoeff=0.0856;MQ=40.54;MQ0=3;MQRankSum=3.837;QD=7.73;ReadPosRankSum=5.971;VQSLOD=3.0238;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	1/1:1,2:3:9.02:103,9,0	0/1:21,0:4:0.94:1,0,9	0/0:28,0:13:29.40:0,29,237	1/1:1,15:16:36.11:454,36,0	1/1:13,1:14:3.95:40,4,0	1/1:3,28:31:41.60:573,42,0	0/1:5,0:5:1.97:2,0,15	1/1:6,12:18:11.87:154,12,0	1/1:5,0:5:2.60:10,3,0	./.	1/1:12,0:12:4.23:15,4,0	0/1:8,0:8:10.07:10,0,12	0/1:4,0:4:5.41:5,0,19	./.	./.	1/1:7,0:7:6.30:20,6,0	1/1:4,0:3:1.91:6,2,0	0/1:9,0:7:8.60:9,0,49	./.	./.	./.	./.	./.	./.	0/1:11,0:11:19.43:43,0,19	1/1:3,0:3:2.81:14,3,0	0/1:4,0:4:11.69:13,0,12
chr10	31888802	.	GCA	G	2545.69	PASS	AB=0.522;AC=36;AF=0.783;AN=46;BaseQRankSum=3.275;DP=245;FS=18.174;HRun=0;HaplotypeScore=67.7103;InbreedingCoeff=0.5337;MQ=39.81;MQ0=9;MQRankSum=2.743;QD=17.09;ReadPosRankSum=5.946;VQSLOD=2.0214;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:0,5:5:0:0,0,0	1/1:5,0:5:14.93:148,15,0	0/0:36,0:6:17.95:0,18,216	0/0:45,0:16:45.60:0,46,758	1/1:16,0:16:36.12:500,36,0	1/1:1,12:13:6.49:92,6,0	1/1:31,0:31:43.71:624,44,0	1/1:0,2:2:6.02:86,6,0	1/1:14,0:14:8.66:134,9,0	1/1:0,3:3:3.01:48,3,0	0/0:1,3:4:0.47:0,0,1	1/1:0,7:7:8.19:72,8,0	1/1:0,7:7:13.05:120,13,0	1/1:0,4:4:4.77:25,5,0	./.	./.	1/1:0,4:4:9.03:123,9,0	1/1:0,3:3:6.02:89,6,0	1/1:0,5:3:9.03:126,9,0	./.	./.	0/1:0,2:2:0:0,0,0	./.	0/1:1,4:5:0:0,0,0	0/1:1,7:8:0:0,0,0	1/1:0,9:9:21.07:331,21,0	1/1:0,2:2:3.01:48,3,0	1/1:0,4:4:6.02:97,6,0
chr10	31888817	.	TAC	T	1034.49	PASS	AB=0.704;AC=34;AF=0.654;AN=52;BaseQRankSum=8.239;DP=277;FS=0.686;HRun=0;HaplotypeScore=79.2494;InbreedingCoeff=0.4902;MQ=37.40;MQ0=11;MQRankSum=-4.987;QD=9.32;ReadPosRankSum=-4.338;VQSLOD=2.5421;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,3:10:1.25:4,1,0	0/1:4,1:5:32.13:32,0,153	0/0:33,0:5:11.80:0,12,152	0/0:41,0:15:45.13:0,45,616	0/0:15,0:15:33.11:0,33,509	0/0:16,0:16:7.33:0,7,128	0/0:34,1:35:41.03:0,41,926	1/1:5,0:5:5.44:26,5,0	0/0:14,0:14:20.30:0,20,321	1/1:4,1:4:8.76:76,9,0	./.	1/1:4,5:9:1.63:113,2,0	1/1:3,3:6:0.63:87,1,0	1/1:5,4:9:13.44:76,13,0	1/1:3,1:4:7.11:38,7,0	1/1:3,0:3:8.77:50,9,0	1/1:2,2:4:11.88:107,12,0	1/1:4,1:5:10.16:69,10,0	1/1:1,3:4:12.01:126,12,0	1/1:5,3:8:2.87:15,3,0	0/0:5,2:7:0.47:0,0,1	0/1:1,2:3:0:0,0,0	./.	0/1:3,2:5:0:0,0,0	1/1:3,5:8:2.88:16,3,0	0/1:5,5:10:10.83:238,0,11	1/1:1,2:3:5.97:51,6,0	1/1:1,4:5:6.02:71,6,0
chr10	31888819	.	CGT	C	316.53	PASS	AB=0.991;AC=28;AF=0.636;AN=44;BaseQRankSum=5.102;DP=300;FS=0.000;HRun=0;HaplotypeScore=87.8384;InbreedingCoeff=0.1187;MQ=37.59;MQ0=12;MQRankSum=-2.718;QD=2.14;ReadPosRankSum=-0.064;VQSLOD=1.7143;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:10,1:11:4.24:28,4,0	0/1:5,0:5:14.46:14,0,78	./.	./.	0/0:15,0:15:6.02:0,6,80	0/0:16,0:16:6.02:0,6,88	0/1:35,2:37:8.11:8,0,267	0/0:6,0:6:3.44:0,3,21	0/0:14,0:15:9.92:0,10,136	0/1:5,0:4:13.34:16,0,13	./.	0/1:9,0:9:23.58:34,0,24	0/1:6,0:6:18.82:19,0,26	1/1:9,0:9:5.20:32,5,0	1/1:4,0:4:7.42:39,7,0	1/1:3,0:3:8.77:50,9,0	1/1:6,0:6:8.11:38,8,0	1/1:6,0:6:9.57:50,10,0	1/1:6,0:6:5.90:42,6,0	1/1:10,0:10:5.22:35,5,0	0/0:12,0:11:0.47:0,0,1	./.	./.	1/1:6,1:7:2.97:20,3,0	1/1:8,0:8:2.80:13,3,0	0/1:10,0:10:11.86:12,0,25	1/1:5,1:6:1.55:4,2,0	./.
chr10	31888821	.	T	TGC	1476.28	PASS	AB=0.789;AC=25;AF=0.481;AN=52;BaseQRankSum=0.007;DP=330;FS=3.349;HRun=0;HaplotypeScore=101.3336;InbreedingCoeff=0.1820;MQ=37.63;MQ0=14;MQRankSum=-2.816;QD=9.65;ReadPosRankSum=-3.481;VQSLOD=2.9011;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,3:13:6:78,6,0	0/0:8,0:8:3.62:0,4,127	0/0:32,0:4:11.88:0,12,96	0/0:39,0:13:35.91:0,36,305	0/0:14,0:14:26.98:0,27,244	0/0:17,0:17:14.83:0,15,149	0/0:36,0:36:34.17:0,34,535	1/1:9,0:9:3.46:103,3,0	0/0:15,0:15:21.97:0,22,227	0/1:6,2:7:24.49:72,0,24	./.	0/1:6,3:9:12.87:151,0,13	0/1:7,2:9:19.69:94,0,20	0/1:8,5:12:4.49:99,0,4	1/1:3,2:5:9.01:157,9,0	1/1:0,3:3:9.03:157,9,0	0/1:5,2:7:8.73:121,0,9	1/1:4,3:7:4.33:197,4,0	0/1:5,1:6:28.68:88,0,29	1/1:5,6:11:6.02:101,6,0	0/1:7,8:15:0.31:0,0,0	0/0:4,1:5:0:0,0,0	./.	1/1:8,1:8:2.96:20,3,0	1/1:7,2:9:3.01:49,3,0	0/1:10,2:12:75.64:128,0,76	0/1:6,1:7:10.28:19,0,10	0/0:6,0:6:5.90:0,6,37
chr10	31888917	.	ATGT	A	12345.45	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=10.386;DP=502;FS=5.648;HRun=0;HaplotypeScore=86.5925;InbreedingCoeff=0.9897;MQ=86.63;MQ0=0;MQRankSum=-7.768;QD=33.37;ReadPosRankSum=3.469;VQSLOD=5.3266;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,26:28:54.10:836,54,0	0/0:9,0:9:24.05:0,24,451	0/0:19,0:19:51.09:0,51,939	0/0:24,0:24:47.29:0,47,954	0/0:13,0:13:36.12:0,36,749	0/0:17,0:17:48.16:0,48,1050	0/0:34,0:34:96.24:0,96,2004	1/1:2,19:21:57.09:777,57,0	0/0:16,0:16:48.16:0,48,1030	1/1:1,18:19:48.08:694,48,0	1/1:1,9:10:17.89:206,18,0	1/1:0,9:9:18.06:291,18,0	1/1:1,19:20:48.16:769,48,0	1/1:0,16:16:39.06:606,39,0	1/1:0,10:10:24.08:392,24,0	1/1:0,13:13:30.10:488,30,0	1/1:2,22:24:42.14:685,42,0	1/1:1,18:19:33.11:538,33,0	1/1:5,2:7:12.03:171,12,0	1/1:1,17:18:48.04:697,48,0	1/1:2,35:37:69.01:1021,69,0	1/1:7,10:17:35.95:508,36,0	1/1:0,12:12:23.99:345,24,0	1/1:1,18:19:36.12:575,36,0	1/1:1,18:19:39.13:636,39,0	1/1:1,27:28:78.25:1213,78,0	1/1:1,11:12:33.04:507,33,0	1/1:0,12:12:24.08:391,24,0
chr10	31889122	.	A	AAG	16804.06	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=6.999;DP=480;FS=0.907;HRun=0;HaplotypeScore=106.1758;InbreedingCoeff=0.9569;MQ=79.10;MQ0=2;MQRankSum=-13.050;QD=44.69;ReadPosRankSum=-0.476;VQSLOD=5.3353;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,24:27:66.19:1100,66,0	0/0:2,0:2:3.01:0,3,42	0/0:21,0:21:57.19:0,57,787	0/0:15,0:15:38.94:0,39,508	0/0:15,0:15:39.12:0,39,530	0/0:17,0:17:45.14:0,45,615	0/0:13,0:13:30.09:0,30,405	1/1:6,31:37:99:1827,105,0	0/0:21,0:21:60.15:0,60,787	1/1:2,16:18:51.17:915,51,0	1/1:4,11:15:33.10:545,33,0	1/1:1,16:17:48.16:840,48,0	1/1:8,20:28:75.06:1204,75,0	1/1:6,14:20:51.16:843,51,0	1/1:3,11:14:36.12:549,36,0	1/1:2,19:21:63.20:1070,63,0	1/1:4,10:14:23.32:538,23,0	1/1:4,10:12:27.07:452,27,0	1/1:8,14:22:63.13:1036,63,0	1/1:5,18:23:60.18:998,60,0	1/1:3,8:11:21.07:376,21,0	1/1:1,5:6:15.05:251,15,0	1/1:3,7:11:29.93:444,30,0	1/1:0,5:5:12.04:215,12,0	1/1:1,25:26:75.26:1309,75,0	1/1:1,13:14:39.13:700,39,0	1/1:5,19:24:72.25:1249,72,0	1/1:1,6:7:21.04:344,21,0
chr10	31889136	.	A	AC	12217.17	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=12.639;DP=462;FS=8.352;HRun=3;HaplotypeScore=117.6562;InbreedingCoeff=0.9526;MQ=79.44;MQ0=0;MQRankSum=-11.795;QD=34.41;ReadPosRankSum=1.740;VQSLOD=3.9808;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,16:19:30.10:419,30,0	0/0:1,0:1:3.01:0,3,36	0/0:21,0:20:48.15:0,48,575	0/0:19,0:19:38.91:0,39,449	0/0:13,0:13:33.10:0,33,395	0/0:19,0:19:51.14:0,51,600	0/0:13,0:13:36.11:0,36,432	1/1:9,30:39:90.26:1237,90,0	0/0:21,0:21:60.17:0,60,707	1/1:2,16:18:51.17:709,51,0	1/1:1,12:13:30.10:419,30,0	1/1:1,18:19:51.17:712,51,0	1/1:3,17:20:51.16:696,51,0	1/1:1,13:14:39.13:545,39,0	1/1:2,13:15:36.12:503,36,0	1/1:2,21:23:66.21:907,66,0	1/1:3,8:11:24.08:335,24,0	1/1:0,10:9:21.07:294,21,0	1/1:2,26:27:81.24:1109,81,0	1/1:2,18:20:57.19:789,57,0	1/1:3,11:14:18.06:252,18,0	1/1:2,4:6:12.04:167,12,0	1/1:1,8:9:21.07:293,21,0	1/1:2,3:5:12.04:167,12,0	1/1:1,23:24:69.23:963,69,0	1/1:2,14:16:39.13:542,39,0	1/1:4,18:22:60.20:831,60,0	1/1:4,6:10:24.08:329,24,0
chr10	31889780	.	ATT	A	4630.14	PASS	AB=0.917;AC=33;AF=0.589;AN=56;BaseQRankSum=7.034;DP=463;FS=6.991;HRun=11;HaplotypeScore=109.8655;InbreedingCoeff=0.8768;MQ=74.58;MQ0=1;MQRankSum=-2.584;QD=17.15;ReadPosRankSum=5.057;VQSLOD=3.4467;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,17:18:36.07:383,36,0	0/0:1,0:4:7.49:0,7,26	0/0:18,0:19:32.58:0,33,391	0/1:20,1:18:59.73:60,0,224	0/0:8,1:23:9.70:0,10,153	0/0:6,0:12:21.47:0,21,138	0/0:3,0:27:58.38:0,58,246	0/0:17,0:19:29.06:0,29,365	0/0:3,0:17:27.64:0,28,93	1/1:4,11:15:36.08:383,36,0	1/1:2,11:13:7.26:93,7,0	1/1:3,14:17:36.06:383,36,0	1/1:7,8:15:14.99:160,15,0	1/1:3,14:17:36.04:383,36,0	1/1:1,10:11:15.01:160,15,0	1/1:2,14:17:36.04:438,36,0	1/1:4,18:23:35.62:437,36,0	1/1:3,5:8:15.01:160,15,0	0/0:12,0:14:32.59:0,33,453	0/0:20,0:20:51.12:0,51,731	0/0:18,0:19:48.53:0,49,689	1/1:4,13:17:17.95:191,18,0	1/1:2,17:19:19.28:220,19,0	1/1:2,22:24:44.16:477,44,0	1/1:2,9:12:21.02:223,21,0	1/1:4,12:16:36.08:383,36,0	0/0:17,0:18:18.06:0,18,260	1/1:0,6:6:9.01:96,9,0
chr10	31889804	.	TATACAC	T	2723.37	PASS	AB=1.000;AC=28;AF=0.500;AN=56;BaseQRankSum=4.006;DP=476;FS=22.452;HRun=0;HaplotypeScore=146.4073;InbreedingCoeff=-0.0269;MQ=57.15;MQ0=25;MQRankSum=-0.407;QD=8.59;ReadPosRankSum=3.210;VQSLOD=1.3532;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:22:99:154,0,280	0/0:5,0:5:12.03:0,12,298	0/0:31,0:12:29.13:0,29,297	0/0:46,0:16:10.22:0,10,189	0/0:21,0:21:41.77:0,42,689	0/0:11,0:11:30.07:0,30,700	0/0:29,0:29:77.91:0,78,1093	1/1:11,0:11:23.57:189,24,0	0/0:16,0:16:35.95:0,36,639	0/1:18,0:18:99:168,0,277	0/1:8,0:7:10.97:11,0,49	0/1:17,0:17:99:190,0,102	1/1:9,0:9:17.34:118,17,0	0/1:14,0:14:59.29:109,0,59	0/1:8,0:12:43.78:44,0,299	0/1:21,0:21:79.16:224,0,79	0/1:23,0:22:99:253,0,197	0/1:8,0:8:48.84:49,0,151	1/1:0,0:7:20.54:171,21,0	1/1:16,0:17:44.91:390,45,0	1/1:16,0:16:26.57:194,27,0	0/1:12,0:12:48.85:49,0,122	0/1:22,0:22:94.52:98,0,95	0/1:29,0:30:99:139,0,229	0/1:10,0:10:58.79:59,0,78	0/1:20,0:19:78.39:78,0,526	1/1:2,11:12:11.45:178,11,0	1/1:4,0:3:5.98:47,6,0
chr10	31889806	.	T	TAC	1750.43	PASS	AB=0.956;AC=41;AF=0.788;AN=52;BaseQRankSum=-0.665;DP=567;FS=9.212;HRun=0;HaplotypeScore=170.7182;InbreedingCoeff=0.1556;MQ=52.91;MQ0=28;MQRankSum=0.910;QD=3.86;ReadPosRankSum=-0.556;VQSLOD=2.2220;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:35,0:34:15.14:138,15,0	1/1:5,1:6:6.02:81,6,0	./.	0/0:46,0:16:0.47:0,0,1	1/1:22,1:23:3.01:44,3,0	0/1:11,1:12:19.25:95,0,19	0/1:28,3:30:34.51:163,0,35	1/1:11,0:11:2.96:19,3,0	0/1:16,1:17:48.57:112,0,49	1/1:21,0:21:17.92:166,18,0	1/1:10,0:9:2.80:13,3,0	1/1:23,0:23:3.80:41,4,0	1/1:13,0:13:0.26:1,0,0	1/1:19,0:18:2.99:24,3,0	1/1:14,0:14:18.05:241,18,0	1/1:24,0:24:8.97:72,9,0	0/1:29,0:28:2.37:116,0,2	1/1:13,0:13:15.67:127,16,0	1/1:10,0:10:2.84:14,3,0	0/0:17,0:17:2.84:0,3,14	0/1:23,0:21:0:0,0,0	1/1:21,0:21:2.99:24,3,0	1/1:23,0:23:6:51,6,0	1/1:33,0:32:14.15:104,14,0	1/1:16,0:13:5.99:50,6,0	1/1:26,0:24:22.31:177,22,0	0/0:17,0:16:4.82:0,5,22	./.
chr10	31890297	.	TAAG	T	23856.78	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-4.756;DP=621;FS=12.767;HRun=0;HaplotypeScore=104.1170;InbreedingCoeff=0.9700;MQ=75.87;MQ0=0;MQRankSum=-9.446;QD=41.20;ReadPosRankSum=5.850;VQSLOD=5.7810;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,30:31:69.24:1149,69,0	1/1:0,9:9:27.09:449,27,0	0/0:22,0:23:60.20:0,60,1257	0/0:19,0:19:43.33:0,43,905	1/1:2,20:22:51.17:849,51,0	1/1:0,33:33:87.30:1447,87,0	1/1:3,30:33:78.27:1297,78,0	1/1:1,25:26:75.26:1243,75,0	1/1:2,21:23:39.13:649,39,0	1/1:1,24:25:72.25:1199,72,0	1/1:1,14:15:33.11:549,33,0	1/1:0,14:14:36.12:599,36,0	1/1:1,15:16:42.14:699,42,0	1/1:1,18:19:45.15:750,45,0	1/1:1,31:32:78.27:1299,78,0	1/1:0,16:16:45.15:750,45,0	1/1:0,27:27:66.23:1097,66,0	1/1:1,22:23:57.19:949,57,0	1/1:0,15:15:45.14:716,45,0	1/1:3,26:29:69.24:1149,69,0	1/1:1,19:20:45.15:748,45,0	1/1:3,26:29:72.25:1199,72,0	1/1:1,27:28:75.26:1249,75,0	1/1:3,20:23:45.15:750,45,0	1/1:1,20:21:57.19:950,57,0	1/1:1,24:25:72.22:1172,72,0	1/1:1,19:20:48.16:799,48,0	1/1:0,5:5:9.03:150,9,0
chr10	31891095	.	T	TC	7794.33	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=6.304;DP=377;FS=5.034;HRun=0;HaplotypeScore=67.6692;InbreedingCoeff=0.9111;MQ=69.18;MQ0=0;MQRankSum=-2.228;QD=24.98;ReadPosRankSum=3.987;VQSLOD=6.0350;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,21:22:51.59:543,52,0	0/0:1,0:1:3.01:0,3,42	0/0:18,0:14:32.91:0,33,365	0/0:11,0:9:23.33:0,23,227	0/0:12,0:12:36.10:0,36,485	0/0:11,0:11:33.08:0,33,424	0/0:2,0:2:6.02:0,6,83	1/1:3,28:31:70.38:854,70,0	0/0:10,0:10:27.09:0,27,375	1/1:0,10:10:30.07:332,30,0	1/1:2,11:13:6.15:211,6,0	1/1:1,9:10:14.65:247,15,0	1/1:1,11:12:30.06:318,30,0	1/1:0,9:9:21.06:233,21,0	1/1:0,15:15:39.04:414,39,0	1/1:1,8:9:22.49:260,22,0	1/1:0,21:21:51.12:544,51,0	1/1:1,16:17:39.08:406,39,0	1/1:1,16:17:40.53:420,41,0	1/1:3,11:14:10.76:326,11,0	1/1:1,9:10:15.04:163,15,0	1/1:4,8:12:27.53:291,28,0	1/1:0,13:13:33.09:361,33,0	1/1:0,7:7:15.04:162,15,0	1/1:0,19:19:42.11:461,42,0	1/1:1,16:17:48.04:492,48,0	1/1:1,17:18:32.19:372,32,0	1/1:1,15:16:36.56:384,37,0
chr10	31893302	.	TTGTC	T	531.13	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.923;DP=611;FS=8.281;HRun=0;HaplotypeScore=156.3116;InbreedingCoeff=0.9956;MQ=70.50;MQ0=0;MQRankSum=-0.543;QD=25.29;ReadPosRankSum=1.243;VQSLOD=3.2563;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:66.23:0,66,1656	0/0:9,0:9:27.09:0,27,685	0/0:35,0:30:33.17:0,33,1160	0/0:35,0:29:57.09:0,57,1011	0/0:26,0:26:72.25:0,72,1790	0/0:26,0:26:66.21:0,66,1565	0/0:17,0:17:42.14:0,42,994	0/0:37,0:37:78.25:0,78,1788	0/0:12,0:12:33.11:0,33,806	0/0:35,0:35:93.32:0,93,2318	0/0:16,0:16:42.14:0,42,1065	0/0:25,0:25:69.20:0,69,1594	0/0:20,0:20:57.20:0,57,1371	0/0:16,0:16:45.15:0,45,1123	1/1:5,16:21:36.12:626,36,0	0/0:13,0:13:36.12:0,36,912	0/0:16,0:16:39.13:0,39,958	0/0:22,0:22:57.20:0,57,1429	0/0:15,0:15:36.12:0,36,881	0/0:36,0:36:99:0,102,2508	0/0:14,0:14:39.13:0,39,989	0/0:13,0:13:36.12:0,36,882	0/0:17,0:17:42.14:0,42,1019	0/0:12,0:12:36.11:0,36,860	0/0:27,0:27:75.26:0,75,1879	0/0:20,0:20:45.15:0,45,1099	0/0:35,0:35:93.32:0,93,2327	0/0:11,0:11:24.08:0,24,608
chr10	31893508	.	AAG	A	20658.88	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=4.773;DP=634;FS=10.987;HRun=0;HaplotypeScore=175.4416;InbreedingCoeff=0.9479;MQ=88.30;MQ0=0;MQRankSum=-11.804;QD=35.87;ReadPosRankSum=7.877;VQSLOD=5.5455;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,39:39:93.31:1390,93,0	1/1:1,10:11:27.09:400,27,0	0/0:27,0:27:75.91:0,76,1299	0/0:31,0:31:77.83:0,78,1168	1/1:1,22:23:61.32:833,61,0	1/1:1,21:22:57.19:851,57,0	1/1:0,23:23:51.17:765,51,0	1/1:3,29:32:78.12:1056,78,0	1/1:1,16:17:45.15:674,45,0	1/1:2,33:35:99:1436,99,0	1/1:0,17:17:45.09:653,45,0	1/1:0,21:21:42.12:635,42,0	1/1:1,30:31:65.92:997,66,0	1/1:0,16:16:39.13:589,39,0	1/1:0,15:15:45.15:679,45,0	1/1:0,21:21:57.19:861,57,0	1/1:1,31:32:66.18:972,66,0	1/1:1,18:19:49.98:731,50,0	1/1:1,15:16:42.10:568,42,0	1/1:1,23:24:60.08:825,60,0	1/1:1,27:28:60.05:852,60,0	1/1:3,16:19:45.15:673,45,0	1/1:1,16:17:44.97:565,45,0	1/1:1,33:34:84.28:1270,84,0	1/1:1,20:21:54.18:808,54,0	1/1:0,15:15:45.15:670,45,0	1/1:4,19:23:54.18:815,54,0	1/1:0,5:5:6.02:91,6,0
chr10	31895695	.	CACACATACACAT	C	2265.93	PASS	AB=0.993;AC=36;AF=0.667;AN=54;BaseQRankSum=-5.863;DP=402;FS=1.220;HRun=0;HaplotypeScore=158.9558;InbreedingCoeff=-0.1330;MQ=34.60;MQ0=19;MQRankSum=0.905;QD=6.59;ReadPosRankSum=-6.027;VQSLOD=-0.2362;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:10,0:10:24.04:24,0,127	./.	0/1:10,0:2:4.49:4,0,28	0/0:27,0:2:3.01:0,3,37	0/1:11,0:10:58.86:90,0,59	0/0:16,0:16:11.72:0,12,132	1/1:17,0:17:17.22:179,17,0	1/1:15,0:12:32.57:357,33,0	0/1:16,0:16:27.61:28,0,44	0/1:20,0:17:99:148,0,297	0/0:12,0:11:3.01:0,3,73	0/1:27,0:27:78.36:105,0,78	0/1:11,0:11:53.97:54,0,189	1/1:14,0:14:11.12:70,11,0	0/1:22,0:22:77.29:77,0,89	1/1:10,0:10:4.37:26,4,0	0/1:12,0:12:6.43:86,0,6	0/1:9,0:9:0.17:57,0,0	1/1:9,0:9:23.55:339,24,0	1/1:9,0:8:3.01:40,3,0	1/1:25,0:19:6.90:105,7,0	1/1:10,0:10:2.97:21,3,0	1/1:11,0:11:4.57:27,5,0	0/1:24,0:24:13.47:108,0,13	1/1:8,0:8:2.98:21,3,0	0/1:24,0:20:99:175,0,628	1/1:4,10:12:8.64:254,9,0	1/1:5,0:5:2.98:22,3,0
chr10	31895699	.	CAT	C	1406.78	PASS	AB=1.000;AC=34;AF=0.630;AN=54;BaseQRankSum=-1.384;DP=421;FS=1.365;HRun=0;HaplotypeScore=133.5810;InbreedingCoeff=0.2506;MQ=35.83;MQ0=22;MQRankSum=-4.943;QD=4.48;ReadPosRankSum=1.713;VQSLOD=3.0702;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:13,0:13:9.88:10,0,20	./.	0/1:11,0:2:5.98:19,0,6	0/0:32,0:2:5.52:0,6,26	1/1:7,4:10:11.97:96,12,0	1/1:3,13:16:11.82:117,12,0	1/1:15,3:18:20.91:178,21,0	1/1:16,0:13:37.14:223,37,0	1/1:11,8:19:11.07:98,11,0	0/1:22,0:19:46.24:70,0,46	0/0:13,0:12:1.72:0,2,5	1/1:28,0:28:12.59:101,13,0	1/1:11,0:11:7.69:62,8,0	1/1:14,0:13:1.78:36,2,0	0/1:21,0:21:12.95:24,0,13	0/1:10,0:10:0.58:5,0,1	1/1:12,0:13:1.42:22,1,0	0/1:10,0:10:0.92:1,0,4	1/1:8,0:9:21.36:127,21,0	1/1:8,0:7:2.97:20,3,0	1/1:25,1:19:5.95:43,6,0	0/0:10,0:10:1.25:0,1,3	0/0:11,0:11:1.62:0,2,4	0/0:26,0:26:0.11:0,0,6	0/0:10,0:10:1.55:0,2,4	1/1:24,0:20:29.76:231,30,0	1/1:13,1:12:8.70:55,9,0	0/0:2,0:2:0.89:0,1,2
chr10	31895703	.	CACAT	C	1404.22	PASS	AB=0.979;AC=46;AF=0.852;AN=54;BaseQRankSum=-2.992;DP=420;FS=0.000;HRun=0;HaplotypeScore=129.5991;InbreedingCoeff=0.2466;MQ=36.47;MQ0=25;MQRankSum=0.718;QD=3.82;ReadPosRankSum=-5.191;VQSLOD=-0.1439;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:13,0:13:43.23:48,0,43	./.	0/0:16,0:2:5.51:0,6,55	0/0:33,0:2:6.02:0,6,80	1/1:11,0:10:11.37:59,11,0	1/1:14,1:15:11.95:135,12,0	1/1:20,0:20:19.88:103,20,0	1/1:16,0:13:36.67:227,37,0	1/1:20,0:20:10.87:83,11,0	0/1:21,0:18:68.35:119,0,68	1/1:11,0:10:1.36:3,1,0	1/1:26,1:27:13.99:128,14,0	0/1:10,1:11:6.40:6,0,37	1/1:14,0:13:6.68:56,7,0	1/1:20,0:20:8.31:79,8,0	1/1:10,0:10:2.48:10,2,0	1/1:13,0:13:9:49,9,0	1/1:10,0:10:4.61:13,5,0	1/1:7,0:7:18.73:123,19,0	1/1:8,0:7:2.97:20,3,0	1/1:28,0:20:6.34:42,6,0	1/1:10,0:10:0.47:1,0,0	1/1:8,0:8:0.47:1,0,0	1/1:23,1:25:7.76:17,8,0	1/1:10,0:10:0.47:1,0,0	0/1:25,0:21:94.61:139,0,95	1/1:13,0:11:8.54:73,9,0	1/1:2,0:2:0.89:2,1,0
chr10	31895705	.	CAT	C	3198.47	PASS	AB=0.812;AC=46;AF=0.852;AN=54;BaseQRankSum=-2.509;DP=436;FS=8.870;HRun=0;HaplotypeScore=117.5446;InbreedingCoeff=0.1959;MQ=36.73;MQ0=27;MQRankSum=2.497;QD=8.53;ReadPosRankSum=-2.813;VQSLOD=2.2315;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:10,4:14:2.36:146,0,2	./.	0/0:18,0:2:5.89:0,6,69	0/0:39,0:2:6.02:0,6,94	1/1:11,0:10:10.85:51,11,0	1/1:14,1:15:11.74:76,12,0	1/1:21,0:21:18.89:87,19,0	1/1:17,0:14:39.32:253,39,0	1/1:17,2:19:10.58:47,11,0	0/1:14,7:18:1.68:292,0,2	1/1:3,8:10:6.02:91,6,0	1/1:21,6:27:9.11:239,9,0	0/1:10,2:12:2.42:100,0,2	1/1:10,5:14:13.69:144,14,0	1/1:15,5:20:3.26:156,3,0	1/1:3,7:10:5.61:89,6,0	1/1:6,6:13:24.40:285,24,0	1/1:0,10:10:15.05:223,15,0	1/1:9,0:8:17.50:107,18,0	1/1:8,0:7:2.97:20,3,0	1/1:29,0:21:6.40:43,6,0	1/1:3,7:10:3.01:46,3,0	1/1:4,3:8:3.01:46,3,0	1/1:10,15:25:24.08:363,24,0	1/1:4,6:10:3.01:46,3,0	0/1:21,4:21:8.58:266,0,9	1/1:13,0:11:8.71:56,9,0	1/1:1,1:2:3.01:46,3,0
chr10	31895707	.	TAC	T	1323.23	PASS	AB=1.000;AC=36;AF=0.692;AN=52;BaseQRankSum=-2.714;DP=443;FS=1.236;HRun=0;HaplotypeScore=121.4998;InbreedingCoeff=-0.0254;MQ=36.95;MQ0=30;MQRankSum=3.969;QD=4.15;ReadPosRankSum=-1.382;VQSLOD=2.7943;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:15,0:15:40.92:41,0,52	./.	0/0:22,0:2:6.02:0,6,79	0/0:43,1:2:6.02:0,6,89	1/1:8,3:10:15.02:158,15,0	1/1:12,2:14:8.68:60,9,0	1/1:5,16:21:18.05:206,18,0	0/0:16,0:13:0:0,0,0	1/1:10,11:21:8.59:103,9,0	0/1:22,0:18:68.97:88,0,69	1/1:11,0:10:5.97:43,6,0	0/1:25,0:25:15.65:76,0,16	0/1:14,0:14:21.84:22,0,48	0/1:15,0:14:4.91:35,0,5	0/1:20,0:20:47.41:47,0,49	1/1:9,0:9:5.58:48,6,0	1/1:12,0:12:1.41:96,1,0	1/1:10,0:10:14.91:111,15,0	1/1:7,0:6:3.21:12,3,0	./.	0/0:29,0:21:0.07:0,0,0	1/1:10,0:10:2.98:22,3,0	1/1:8,0:8:2.98:22,3,0	1/1:24,0:25:23.88:177,24,0	1/1:9,0:10:2.98:21,3,0	0/1:24,0:20:41.92:42,0,124	0/1:14,0:12:10.20:10,0,16	1/1:1,0:1:2.98:22,3,0
chr10	31896008	.	G	GGTT	8693.64	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-15.739;DP=639;FS=6.778;HRun=0;HaplotypeScore=131.6308;InbreedingCoeff=0.9977;MQ=70.90;MQ0=0;MQRankSum=-0.804;QD=39.52;ReadPosRankSum=-0.881;VQSLOD=5.6138;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:3,0:43:85.26:0,85,546	1/1:0,9:9:21.07:505,21,0	0/0:18,0:18:32.31:0,32,599	0/0:9,0:7:17.44:0,17,163	1/1:1,19:20:47.06:938,47,0	1/1:1,16:17:45.15:1072,45,0	1/1:1,20:21:39.09:898,39,0	1/1:1,0:41:99:1361,120,0	1/1:0,19:21:45.15:1087,45,0	0/0:5,0:35:71.41:0,71,533	0/0:4,0:19:48.13:0,48,339	0/0:6,0:20:49.92:0,50,355	0/0:6,0:20:26.32:0,26,268	0/0:3,0:19:39.84:0,40,242	0/0:3,0:33:93.12:0,93,574	0/0:5,0:26:64.23:0,64,394	0/0:7,0:26:60.68:0,61,413	0/0:4,0:17:43.79:0,44,264	1/1:0,0:19:57.14:689,57,0	1/1:0,0:15:45.06:517,45,0	1/1:0,0:23:60.18:755,60,0	0/0:2,0:25:50.05:0,50,283	0/0:4,0:24:59.91:0,60,384	0/0:3,0:22:61.20:0,61,360	0/0:1,0:16:43.54:0,44,274	0/0:5,0:30:80.65:0,81,481	1/1:0,0:32:69.22:872,69,0	0/0:1,0:17:40.74:0,41,262
chr10	31896767	.	TCACACACACACACACACACACACACACACA	T	4387.40	PASS	AB=0.895;AC=26;AF=0.619;AN=42;BaseQRankSum=2.988;DP=492;FS=0.000;HRun=0;HaplotypeScore=305.7287;InbreedingCoeff=0.3100;MQ=58.15;MQ0=30;MQRankSum=-2.518;QD=16.75;ReadPosRankSum=-0.168;VQSLOD=2.8462;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:32,0:31:5.16:49,5,0	0/0:5,0:5:3.01:0,3,202	./.	0/0:40,0:21:6.02:0,6,141	./.	0/0:16,0:16:9.03:0,9,704	0/0:26,0:27:30.09:0,30,1727	./.	0/0:14,0:15:30.10:0,30,1892	0/0:18,0:15:2.92:0,3,17	./.	1/1:12,9:20:21.07:1496,21,0	1/1:22,0:21:9.02:423,9,0	1/1:7,4:11:3.01:229,3,0	1/1:16,3:17:6.02:336,6,0	1/1:12,3:14:3.01:229,3,0	0/1:12,0:14:99:307,0,291	1/1:11,3:14:3:119,3,0	0/1:10,0:10:0:0,0,0	./.	./.	0/1:10,5:15:35.52:268,0,36	1/1:10,4:14:6.02:230,6,0	1/1:28,1:27:3.01:230,3,0	1/1:17,0:15:3.01:46,3,0	0/1:20,1:20:99:336,0,384	./.	1/1:7,0:6:3.01:89,3,0
chr10	31896797	.	A	AT	2430.21	PASS	AB=0.968;AC=19;AF=0.432;AN=44;BaseQRankSum=1.935;DP=356;FS=18.135;HRun=0;HaplotypeScore=171.4345;InbreedingCoeff=-0.2278;MQ=39.54;MQ0=45;MQRankSum=-5.091;QD=9.96;ReadPosRankSum=-3.216;VQSLOD=1.6525;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:14,4:17:66.12:122,0,66	0/0:4,0:4:9:0,9,105	./.	0/0:11,0:3:9.01:0,9,106	0/0:19,0:18:27.09:0,27,372	0/0:16,0:15:30.10:0,30,408	0/0:23,0:23:39.38:0,39,487	./.	0/0:24,0:21:51.03:0,51,677	0/1:12,1:8:71.89:154,0,72	1/1:17,0:15:8.56:224,9,0	0/1:17,0:15:23.04:92,0,23	0/1:21,0:18:64.20:170,0,64	0/1:18,0:18:21.57:170,0,22	1/1:21,0:19:10.43:444,10,0	0/1:12,0:11:8.73:92,0,9	0/1:11,2:13:37.83:154,0,38	0/1:12,0:8:25.76:35,0,26	./.	./.	./.	0/1:14,0:14:20.52:263,0,21	1/1:11,0:11:9.56:228,10,0	0/1:20,0:16:53.71:112,0,54	0/1:16,0:13:18.45:126,0,18	0/1:16,0:15:60.78:159,0,61	./.	0/1:4,0:3:9.91:36,0,10
chr10	31897059	.	AGATGTTGTTGTC	A	4681.90	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=7.487;DP=742;FS=0.527;HRun=0;HaplotypeScore=279.6830;InbreedingCoeff=0.9843;MQ=66.15;MQ0=0;MQRankSum=-9.164;QD=49.28;ReadPosRankSum=0.922;VQSLOD=4.2419;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,117,4975	1/1:3,4:7:9.03:309,9,0	0/0:25,0:23:57.09:0,57,2581	0/0:25,0:23:44.18:0,44,2209	1/1:5,13:18:20.94:262,21,0	1/1:1,23:24:48.16:1585,48,0	1/1:5,20:24:39.13:1120,39,0	0/0:28,0:28:72.25:0,72,3617	1/1:8,13:21:45.10:1406,45,0	0/0:31,0:31:81.27:0,81,3994	0/0:21,0:21:48.14:0,48,2056	0/0:27,0:27:66.02:0,66,2996	0/0:30,0:30:75.21:0,75,3022	0/0:34,0:34:81.28:0,81,3316	0/0:43,0:43:99:0,111,5241	0/0:34,0:34:84.27:0,84,3607	0/0:28,0:28:51.17:0,51,2324	0/0:12,0:12:24.08:0,24,1025	0/0:21,0:21:48.11:0,48,1415	0/0:17,0:17:48.16:0,48,2348	0/0:47,0:47:99:0,101,4212	0/0:15,0:15:33.11:0,33,1679	0/0:23,0:23:60.21:0,60,3072	0/0:37,0:36:72.25:0,72,2847	0/0:25,0:25:69.22:0,69,2798	0/0:31,0:31:84.23:0,84,3934	0/0:34,0:34:84.29:0,84,3813	0/0:10,0:10:24.08:0,24,968
chr10	31897094	.	ATGGTGGTGG	A	6781.66	PASS	AB=0.784;AC=35;AF=0.673;AN=52;BaseQRankSum=-1.193;DP=729;FS=0.000;HRun=0;HaplotypeScore=240.2597;InbreedingCoeff=0.6464;MQ=42.24;MQ0=19;MQRankSum=-3.890;QD=13.35;ReadPosRankSum=6.146;VQSLOD=3.2289;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:19,26:44:3:85,3,0	0/0:2,0:5:3.18:0,3,113	0/0:47,0:22:33.11:0,33,1252	0/0:53,0:26:45.15:0,45,1485	0/0:15,0:18:3.01:0,3,53	0/0:15,0:22:26.95:0,27,376	0/0:22,0:23:21.73:0,22,297	1/1:16,9:23:27.09:702,27,0	0/0:10,0:18:10.81:0,11,303	1/1:17,8:23:24.06:614,24,0	1/1:9,1:10:3.01:51,3,0	1/1:11,14:25:3:86,3,0	1/1:10,22:32:38.97:1112,39,0	1/1:8,27:35:15.05:422,15,0	1/1:15,25:40:3.01:85,3,0	1/1:6,24:30:24.07:682,24,0	1/1:11,15:26:15.05:400,15,0	1/1:4,7:11:12.04:342,12,0	1/1:15,8:22:21.47:400,21,0	./.	0/1:44,4:47:7.45:65,0,7	./.	0/1:11,5:16:0:0,0,0	0/1:20,20:39:0.23:0,0,1	1/1:8,13:21:3.01:86,3,0	1/1:20,6:26:12.04:291,12,0	1/1:9,14:23:30.10:847,30,0	1/1:1,6:7:18.06:513,18,0
chr10	31897120	.	ATG	A	611.30	PASS	AB=0.933;AC=14;AF=0.259;AN=54;BaseQRankSum=0.287;DP=608;FS=3.948;HRun=0;HaplotypeScore=177.5741;InbreedingCoeff=0.4409;MQ=38.73;MQ0=40;MQRankSum=1.574;QD=3.80;ReadPosRankSum=1.588;VQSLOD=2.9948;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:45,1:44:11.94:0,12,128	1/1:4,1:5:3.01:34,3,0	./.	0/0:39,0:9:3.01:0,3,30	1/1:5,5:10:9.03:102,9,0	1/1:10,3:12:9.01:91,9,0	1/1:14,5:17:6.94:103,7,0	0/0:21,0:18:15.30:0,15,190	1/1:9,14:23:22.09:348,22,0	0/0:17,0:16:24.04:0,24,321	0/0:6,0:6:8.98:0,9,111	0/0:20,0:20:17.91:0,18,231	0/1:26,1:27:21.20:21,0,142	0/0:34,1:34:18.48:0,18,217	0/0:34,1:34:17.09:0,17,237	0/1:26,1:27:5.95:6,0,261	0/0:26,0:24:29.82:0,30,341	0/0:13,0:12:20.82:0,21,194	0/0:20,0:17:23.57:0,24,245	0/0:7,0:7:6.02:0,6,92	0/0:40,2:40:13.88:0,14,167	0/1:14,2:15:55.83:56,0,57	0/0:9,0:9:3.01:0,3,46	0/0:32,1:33:5.82:0,6,70	0/0:20,0:20:15.02:0,15,187	0/0:14,0:13:22.50:0,22,236	0/1:19,1:20:11.25:11,0,328	0/0:7,0:7:12.69:0,13,151
chr10	31897164	.	A	ATG	2724.24	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-5.817;DP=745;FS=0.487;HRun=0;HaplotypeScore=157.8941;InbreedingCoeff=0.9662;MQ=50.84;MQ0=20;MQRankSum=-0.860;QD=18.16;ReadPosRankSum=-2.436;VQSLOD=3.4175;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:58:93.77:0,94,1162	0/0:6,0:6:18.04:0,18,211	0/0:23,0:9:11.85:0,12,129	0/0:33,0:16:23.78:0,24,383	0/0:24,0:24:45.04:0,45,539	0/0:21,0:21:42.11:0,42,507	0/0:34,0:33:63.20:0,63,776	1/1:12,24:32:68.82:1002,69,0	0/0:26,0:25:42.07:0,42,509	0/0:29,0:28:71.65:0,72,840	0/0:18,0:18:32.93:0,33,398	0/0:30,0:30:63.20:0,63,787	0/0:30,0:30:51.63:0,52,637	0/0:27,0:25:35.78:0,36,388	0/0:29,0:29:41.76:0,42,542	0/0:22,0:21:40.37:0,40,484	0/0:40,0:38:59.70:0,60,715	0/0:18,0:17:42.13:0,42,520	1/1:13,4:14:30.06:397,30,0	1/1:0,13:13:11.99:198,12,0	1/1:16,42:56:33.06:513,33,0	0/0:22,0:21:39.12:0,39,487	0/0:9,0:9:9.03:0,9,112	0/0:38,0:37:45.23:0,45,559	0/0:18,0:18:24.08:0,24,299	0/0:24,0:23:66.19:0,66,797	1/1:20,6:25:16.66:785,17,0	0/0:14,0:14:31.32:0,31,361
chr10	31898319	.	T	TCTCC	9047.57	PASS	AB=0.583;AC=31;AF=0.554;AN=56;BaseQRankSum=-11.046;DP=448;FS=4.035;HRun=0;HaplotypeScore=55.8998;InbreedingCoeff=0.8896;MQ=63.37;MQ0=15;MQRankSum=-0.718;QD=55.85;ReadPosRankSum=3.651;VQSLOD=6.0015;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,10:14:27.01:625,27,0	0/0:6,0:6:15.05:0,15,252	0/0:82,0:22:33.52:0,34,417	0/0:107,0:31:37.45:0,37,411	0/0:7,0:7:18.05:0,18,286	0/0:9,0:9:27.08:0,27,441	0/0:11,0:11:21.07:0,21,351	0/0:17,0:17:33.07:0,33,453	0/0:8,0:8:24.08:0,24,415	1/1:1,8:9:24.08:582,24,0	1/1:0,8:8:18.02:395,18,0	1/1:0,9:10:27.09:680,27,0	1/1:0,12:12:21.07:529,21,0	1/1:1,13:15:33.11:830,33,0	0/1:2,5:7:18.11:345,0,18	1/1:0,13:13:30.10:762,30,0	1/1:0,10:10:27.09:681,27,0	1/1:0,9:9:24.08:609,24,0	0/0:6,0:6:12:0,12,170	0/0:12,0:12:33.08:0,33,519	0/0:8,0:8:24.06:0,24,374	1/1:0,16:17:42.14:1007,42,0	1/1:1,8:9:21.07:533,21,0	1/1:1,8:10:15.05:380,15,0	1/1:0,9:9:21.07:529,21,0	1/1:3,6:9:24.08:536,24,0	0/0:12,0:12:36.12:0,36,609	1/1:1,0:1:2.99:23,3,0
chr10	31898508	.	C	CT	2666.42	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=-12.099;DP=595;FS=0.000;HRun=0;HaplotypeScore=133.8501;InbreedingCoeff=0.8503;MQ=84.39;MQ0=0;MQRankSum=-1.371;QD=20.67;ReadPosRankSum=-0.749;VQSLOD=4.2687;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,129,745	1/1:0,7:7:15.05:195,15,0	0/0:20,0:20:57.04:0,57,686	0/0:18,0:18:52.72:0,53,707	1/1:3,14:17:30.34:515,30,0	1/1:1,21:22:51.03:616,51,0	1/1:0,24:24:60.11:767,60,0	0/1:33,0:33:11.96:12,0,222	1/1:2,24:26:55.95:737,56,0	0/0:15,0:15:42.46:0,42,227	0/0:9,0:9:26.28:0,26,150	0/0:29,0:29:81.14:0,81,461	0/0:27,0:27:45.88:0,46,351	0/0:20,0:20:54.65:0,55,290	0/0:32,0:32:85.94:0,86,469	0/0:28,0:28:80.47:0,80,422	0/0:26,0:26:43.68:0,44,345	0/0:22,0:22:63.86:0,64,356	0/0:14,0:14:2.54:0,3,118	0/0:15,0:15:40.80:0,41,258	0/0:23,0:23:61.91:0,62,345	0/0:16,0:16:46.78:0,47,283	0/0:17,0:17:42.92:0,43,286	0/0:22,0:22:53.43:0,53,286	0/0:16,0:16:44.52:0,45,246	0/0:24,0:24:63.01:0,63,342	0/0:22,0:22:63.67:0,64,365	0/0:6,0:6:17.50:0,17,101
chr10	31899294	.	TTTTG	T	2284.31	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=11.242;DP=655;FS=5.169;HRun=0;HaplotypeScore=107.8871;InbreedingCoeff=0.9959;MQ=68.80;MQ0=0;MQRankSum=-3.809;QD=26.26;ReadPosRankSum=1.268;VQSLOD=3.3163;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:87.30:0,87,2121	1/1:2,8:10:15.05:252,15,0	0/0:20,0:19:33.10:0,33,701	0/0:17,0:17:41.40:0,41,741	1/1:4,17:21:44.99:635,45,0	1/1:2,12:14:30.10:493,30,0	1/1:7,15:22:30.06:473,30,0	0/0:30,0:29:57.19:0,57,1248	1/1:4,16:20:36.12:605,36,0	0/0:28,0:28:75.19:0,75,1735	0/0:24,0:24:69.24:0,69,1701	0/0:15,0:15:36.12:0,36,861	0/0:31,0:31:87.30:0,87,2145	0/0:21,0:21:57.20:0,57,1388	0/0:20,0:20:48.13:0,48,1078	0/0:22,0:22:54.19:0,54,1304	0/0:34,0:34:84.29:0,84,2022	0/0:30,0:30:66.23:0,66,1610	0/0:25,0:25:45.14:0,45,1010	0/0:27,0:27:72.23:0,72,1697	0/0:23,0:23:48.16:0,48,1131	0/0:22,0:22:45.15:0,45,1095	0/0:20,0:20:54.18:0,54,1326	0/0:24,0:24:60.21:0,60,1488	0/0:26,0:26:51.17:0,51,1262	0/0:29,0:29:78.27:0,78,1923	0/0:27,0:27:69.24:0,69,1622	0/0:19,0:19:51.18:0,51,1265
chr10	31901242	.	G	GGTGT	1316.03	PASS	AB=0.815;AC=24;AF=0.500;AN=48;BaseQRankSum=-2.279;DP=586;FS=2.079;HRun=0;HaplotypeScore=117.9733;InbreedingCoeff=0.2196;MQ=68.00;MQ0=21;MQRankSum=0.045;QD=4.20;ReadPosRankSum=-0.412;VQSLOD=2.0850;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:26,1:26:20.80:260,21,0	./.	./.	./.	0/0:26,0:26:6:0,6,85	0/0:19,0:21:11.51:0,12,127	0/0:19,0:21:6.01:0,6,56	1/1:21,0:19:1.25:3,1,0	0/0:15,0:18:6:0,6,55	1/1:22,0:21:5.75:55,6,0	0/0:11,4:15:3:0,3,46	1/1:11,0:14:14.74:140,15,0	1/1:9,0:8:3.01:69,3,0	0/1:8,0:17:21.68:22,0,26	0/0:21,0:21:12.03:0,12,162	0/1:13,1:16:36.84:74,0,37	0/1:25,1:44:19.12:198,0,19	0/1:17,4:23:24.83:137,0,25	0/0:23,0:22:0.47:0,0,1	0/0:15,0:17:3:0,3,28	1/1:26,0:24:0.47:1,0,0	0/1:15,0:15:33.08:62,0,33	0/0:31,0:31:3:0,3,28	1/1:12,3:19:11.43:220,11,0	1/1:15,0:20:2.30:11,2,0	1/1:16,0:18:17.49:209,17,0	0/1:13,0:14:2.48:2,0,22	./.
chr10	31901627	.	G	GGTT	1646.19	PASS	AB=0.590;AC=24;AF=0.429;AN=56;BaseQRankSum=15.652;DP=580;FS=0.371;HRun=0;HaplotypeScore=114.1891;InbreedingCoeff=-0.2736;MQ=62.90;MQ0=0;MQRankSum=-1.119;QD=3.83;ReadPosRankSum=2.175;VQSLOD=2.3046;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:12,0:38:99:127,0,137	0/0:14,0:14:42.13:0,42,749	0/0:18,0:18:32.68:0,33,703	0/0:12,0:11:29.87:0,30,475	0/0:26,0:26:75.17:0,75,1258	0/0:21,0:21:63.17:0,63,1074	0/0:34,0:34:99:0,99,1737	0/1:15,0:35:99:135,0,192	0/0:25,0:25:72.22:0,72,1243	0/1:5,0:20:70.09:70,0,86	0/1:6,0:17:32.66:72,0,33	0/1:6,0:22:35.11:35,0,99	0/1:5,0:27:1.02:74,0,1	0/1:4,0:21:56.71:58,0,57	0/1:7,0:23:76.28:76,0,86	1/1:1,0:18:25.11:131,25,0	0/1:1,0:21:0.22:98,0,0	0/1:2,0:18:27.61:28,0,40	0/1:9,0:21:98.05:98,0,158	0/1:8,0:23:99:247,0,134	0/1:4,1:20:63.99:82,0,64	1/1:2,0:9:16.23:86,16,0	0/1:5,0:9:31.55:38,0,32	0/1:4,0:20:45.88:47,0,46	0/1:10,0:23:76.34:76,0,144	0/1:8,0:22:99:137,0,139	0/1:5,0:14:49.47:53,0,49	1/1:0,0:9:0.89:48,1,0
chr10	31901834	.	T	TTATC	3145.01	PASS	AB=0.909;AC=31;AF=0.620;AN=50;BaseQRankSum=-5.702;DP=525;FS=0.000;HRun=0;HaplotypeScore=105.3892;InbreedingCoeff=0.4154;MQ=59.53;MQ0=9;MQRankSum=2.820;QD=10.24;ReadPosRankSum=0.114;VQSLOD=2.6199;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:25:3.01:52,3,0	0/1:10,0:10:8.37:8,0,27	./.	./.	0/0:24,0:24:27:0,27,255	0/0:22,0:22:24.05:0,24,246	0/0:16,0:16:8.95:0,9,68	./.	0/0:17,0:17:14.88:0,15,124	0/0:26,0:26:39.13:0,39,584	0/1:19,3:22:99:114,0,226	1/1:11,1:18:12.04:205,12,0	1/1:15,0:16:15.05:278,15,0	1/1:8,0:8:6.02:103,6,0	0/0:8,0:13:11.81:0,12,88	0/0:21,0:21:42.09:0,42,567	0/1:18,0:18:30.92:31,0,251	0/1:19,0:19:6.62:75,0,7	1/1:10,2:11:9.03:189,9,0	1/1:14,10:24:24.08:503,24,0	1/1:7,3:10:6.02:138,6,0	1/1:10,0:12:2.99:52,3,0	0/1:12,11:24:26.01:328,0,26	1/1:10,0:14:6.02:104,6,0	1/1:18,1:18:15.01:193,15,0	1/1:16,8:24:0.34:479,0,0	1/1:8,6:14:15.05:332,15,0	1/1:10,6:16:6.02:138,6,0
chr10	31901890	.	CTATCTTTG	C	687.02	PASS	AB=0.981;AC=7;AF=0.125;AN=56;BaseQRankSum=4.563;DP=504;FS=9.004;HRun=0;HaplotypeScore=135.4504;InbreedingCoeff=0.3766;MQ=62.08;MQ0=9;MQRankSum=-4.662;QD=9.16;ReadPosRankSum=0.682;VQSLOD=2.1733;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:60.17:0,60,999	0/1:10,0:10:68.22:68,0,400	0/0:10,0:9:26.56:0,27,386	0/0:6,0:5:0.02:0,0,169	0/0:17,0:17:5.61:0,6,147	0/0:26,0:26:10.26:0,10,69	1/1:1,19:20:6.02:173,6,0	0/0:29,0:26:72.20:0,72,1264	1/1:2,13:15:15.52:432,16,0	0/0:26,0:26:78.20:0,78,2376	0/0:19,0:19:54.19:0,54,1645	0/0:15,0:15:33.11:0,33,755	0/0:13,0:13:36.12:0,36,801	0/0:18,0:18:54.18:0,54,1025	0/1:13,0:13:99:110,0,352	0/1:16,1:17:36.31:36,0,1606	0/0:24,0:24:69.21:0,69,1673	0/0:29,0:29:78.16:0,78,1419	0/0:17,0:15:45.13:0,45,958	0/0:23,0:22:66.22:0,66,1518	0/0:8,0:8:21.07:0,21,492	0/0:5,0:5:15.02:0,15,240	0/0:23,0:23:45.24:0,45,1174	0/0:15,0:15:30.10:0,30,526	0/0:20,0:19:51.16:0,51,1045	0/0:23,0:22:63.20:0,63,1467	0/0:22,0:22:57.18:0,57,1258	0/0:11,0:10:12.04:0,12,322
chr10	31901894	.	CTTTG	C	1050.40	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=5.316;DP=493;FS=9.386;HRun=0;HaplotypeScore=100.5964;InbreedingCoeff=0.7400;MQ=63.44;MQ0=2;MQRankSum=-3.803;QD=12.36;ReadPosRankSum=0.382;VQSLOD=2.6269;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:66.22:0,66,1037	0/1:9,0:9:18.44:104,0,18	0/0:10,0:9:26.56:0,27,386	0/0:8,0:6:0.64:0,1,170	1/1:2,15:17:21.03:360,21,0	1/1:1,24:25:24.08:454,24,0	1/1:19,0:19:6.02:83,6,0	0/0:29,0:28:78.22:0,78,1377	1/1:15,0:15:15.52:205,16,0	0/0:28,0:28:84.21:0,84,1698	0/0:19,0:19:54.19:0,54,1154	0/0:15,0:15:33.11:0,33,561	0/0:13,0:13:29.85:0,30,513	0/0:15,0:15:42.01:0,42,701	0/0:15,0:15:40.08:0,40,527	0/0:18,0:18:5.98:0,6,927	0/0:23,0:23:63.19:0,63,1178	0/0:29,0:29:63.14:0,63,1047	0/0:15,0:15:45.13:0,45,806	0/0:23,0:23:66.19:0,66,1158	0/0:7,0:7:21.07:0,21,388	0/0:3,0:3:9.03:0,9,158	0/0:22,0:22:48.25:0,48,816	0/0:15,0:15:33.11:0,33,516	0/0:19,0:18:44.96:0,45,792	0/0:23,0:23:57.02:0,57,1043	0/0:20,0:20:54.18:0,54,976	0/0:9,0:9:12.04:0,12,218
chr10	31902055	.	C	CTT	7614.10	PASS	AB=0.578;AC=40;AF=0.714;AN=56;BaseQRankSum=5.982;DP=487;FS=1.924;HRun=11;HaplotypeScore=100.3659;InbreedingCoeff=0.7760;MQ=66.24;MQ0=0;MQRankSum=-5.498;QD=21.75;ReadPosRankSum=-0.828;VQSLOD=4.2849;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,14:24:15.26:608,15,0	1/1:0,0:5:12.58:45,13,0	0/0:14,0:15:9.44:0,9,191	0/0:12,0:12:8.84:0,9,80	1/1:4,1:19:39.59:208,40,0	0/1:5,1:22:68.87:107,0,69	0/1:5,0:16:48.69:49,0,79	0/0:32,0:34:71.50:0,71,660	1/1:3,1:14:20.48:104,20,0	1/1:6,10:17:41.62:556,42,0	1/1:18,14:33:7.54:734,8,0	1/1:5,7:12:30.01:386,30,0	1/1:5,10:15:39.12:545,39,0	1/1:6,11:18:42.14:592,42,0	1/1:1,1:10:21.04:224,21,0	1/1:6,7:15:35.60:471,36,0	1/1:13,7:20:30.50:370,31,0	1/1:10,3:14:20.56:269,21,0	0/0:17,0:19:41.46:0,41,369	0/0:23,0:23:51.02:0,51,495	0/0:11,0:11:17.92:0,18,174	1/1:4,9:13:30.06:410,30,0	1/1:4,8:14:34.95:432,35,0	1/1:4,2:8:11.53:134,12,0	1/1:16,8:27:49.36:595,49,0	1/1:9,11:21:44.58:570,45,0	0/0:22,0:23:59.77:0,60,565	1/1:8,3:13:20.01:207,20,0
chr10	31902078	.	ACT	A	9444.73	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=10.366;DP=527;FS=2.348;HRun=0;HaplotypeScore=95.4181;InbreedingCoeff=0.9986;MQ=81.53;MQ0=4;MQRankSum=-7.992;QD=37.33;ReadPosRankSum=3.794;VQSLOD=6.8434;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,17:20:48.07:640,48,0	0/0:6,0:6:18.06:0,18,337	0/0:22,0:22:45.11:0,45,953	0/0:20,0:20:55.77:0,56,913	0/0:24,0:24:72.25:0,72,1347	0/0:26,0:26:72.25:0,72,1328	0/0:24,0:24:63.16:0,63,1127	0/0:41,0:41:99:0,114,2083	0/0:13,0:13:36.12:0,36,663	1/1:1,14:15:42.14:616,42,0	1/1:3,20:23:66.14:922,66,0	1/1:1,19:20:54.17:777,54,0	1/1:2,14:15:39.09:555,39,0	1/1:0,25:25:69.23:1016,69,0	0/0:16,0:16:42.14:0,42,778	1/1:2,12:14:32.80:468,33,0	1/1:3,14:17:36.12:521,36,0	1/1:1,12:13:33.11:481,33,0	0/0:26,0:26:75.26:0,75,1380	0/0:18,0:18:48.16:0,48,872	0/0:14,0:14:42.14:0,42,786	1/1:1,13:14:39.09:550,39,0	1/1:3,10:13:33.09:465,33,0	1/1:0,11:11:30.10:425,30,0	1/1:0,17:17:51.09:703,51,0	1/1:2,15:17:48.15:687,48,0	0/0:24,0:24:66.21:0,66,1203	1/1:3,15:15:42.14:618,42,0
chr10	31902258	.	GT	G	14581.10	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=8.573;DP=726;FS=0.862;HRun=1;HaplotypeScore=76.1147;InbreedingCoeff=0.9987;MQ=84.02;MQ0=0;MQRankSum=-3.813;QD=38.37;ReadPosRankSum=6.900;VQSLOD=4.7385;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,37:37:99:1426,102,0	0/0:6,0:6:18.06:0,18,288	0/0:27,0:27:78.24:0,78,1158	0/0:19,0:19:57.15:0,57,863	0/0:31,0:31:93.32:0,93,1481	0/0:22,0:22:66.21:0,66,1028	0/0:37,0:37:99:0,111,1772	0/0:39,0:39:99:0,114,1778	0/0:28,0:28:84.29:0,84,1336	1/1:0,23:23:69.17:925,69,0	1/1:0,14:14:42.14:586,42,0	1/1:0,28:28:75.25:1049,75,0	1/1:0,31:31:87.29:1213,87,0	1/1:0,15:15:45.15:629,45,0	1/1:0,33:33:93.31:1298,93,0	1/1:0,26:26:66.21:923,66,0	1/1:0,38:38:99:1468,105,0	1/1:0,14:14:39.02:519,39,0	0/0:28,0:28:84.25:0,84,1257	0/0:30,0:30:90.28:0,90,1412	0/0:57,0:57:99:0,172,2705	1/1:0,17:17:48.16:670,48,0	1/1:1,17:18:50.99:664,51,0	1/1:0,27:27:69.23:965,69,0	1/1:0,25:25:66.22:922,66,0	1/1:0,23:23:69.21:945,69,0	0/0:22,0:21:66.23:0,66,1054	1/1:0,11:11:27.09:378,27,0
chr10	31902692	.	A	AAC	4473.28	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-6.618;DP=621;FS=3.882;HRun=0;HaplotypeScore=74.2270;InbreedingCoeff=0.9952;MQ=84.33;MQ0=0;MQRankSum=-3.832;QD=48.62;ReadPosRankSum=-1.079;VQSLOD=5.2749;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,105,1484	1/1:0,7:7:21.07:384,21,0	0/0:20,0:20:51.07:0,51,665	0/0:21,0:21:60.10:0,60,812	1/1:1,14:16:45.12:762,45,0	1/1:4,17:22:63.20:1068,63,0	1/1:2,24:26:69.24:1247,69,0	0/0:28,0:28:78.26:0,78,1115	1/1:5,16:21:57.18:1012,57,0	0/0:22,0:22:63.21:0,63,902	0/0:6,0:6:18.06:0,18,258	0/0:24,0:24:72.24:0,72,1032	0/0:23,0:23:69.23:0,69,987	0/0:33,0:33:93.31:0,93,1332	0/0:31,0:31:84.27:0,84,1186	0/0:25,0:25:75.25:0,75,1075	0/0:41,0:41:99:0,120,1642	0/0:26,0:26:72.24:0,72,1030	0/0:19,0:19:51.12:0,51,674	0/0:16,0:16:42.14:0,42,602	0/0:32,0:32:83.22:0,83,1236	0/0:7,0:7:18.06:0,18,255	0/0:17,0:17:45.15:0,45,644	0/0:17,0:17:51.17:0,51,731	0/0:26,0:26:72.20:0,72,986	0/0:17,0:17:48.16:0,48,688	0/0:31,0:31:90.29:0,90,1270	0/0:10,0:10:30.10:0,30,430
chr10	31902760	.	C	CA	3845.14	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-8.292;DP=612;FS=6.431;HRun=1;HaplotypeScore=69.3121;InbreedingCoeff=0.9980;MQ=77.40;MQ0=0;MQRankSum=-2.856;QD=40.91;ReadPosRankSum=1.815;VQSLOD=4.3371;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,99,1284	1/1:0,13:13:39.13:584,39,0	0/0:18,0:18:52.02:0,52,629	0/0:21,0:22:50.05:0,50,586	1/1:2,20:22:60.20:883,60,0	1/1:0,19:19:57.19:851,57,0	1/1:6,19:25:69.18:988,69,0	0/0:28,0:28:81.25:0,81,1035	1/1:2,13:15:36.12:539,36,0	0/0:30,0:30:90.29:0,90,1157	0/0:11,0:11:33.11:0,33,428	0/0:24,0:24:69.22:0,69,896	0/0:16,0:16:45.15:0,45,584	0/0:22,0:22:60.18:0,60,766	0/0:29,0:29:84.25:0,84,1062	0/0:20,0:20:51.16:0,51,662	0/0:31,0:31:87.28:0,87,1130	0/0:20,0:20:54.15:0,54,684	0/0:27,0:27:75.23:0,75,953	0/0:24,0:24:72.23:0,72,934	0/0:31,0:31:90.27:0,90,1152	0/0:21,0:21:63.19:0,63,804	0/0:13,0:13:39.13:0,39,506	0/0:19,0:19:57.19:0,57,740	0/0:23,0:23:69.22:0,69,896	0/0:20,0:20:60.19:0,60,767	0/0:29,0:29:84.26:0,84,1075	0/0:6,0:6:18.02:0,18,202
chr10	31903866	.	GA	G	8713.02	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-14.746;DP=637;FS=0.642;HRun=8;HaplotypeScore=87.5692;InbreedingCoeff=0.9987;MQ=74.96;MQ0=0;MQRankSum=-2.045;QD=25.18;ReadPosRankSum=3.789;VQSLOD=5.2861;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,40:42:96.15:927,96,0	0/0:2,0:11:28.88:0,29,159	0/0:13,0:12:23.79:0,24,276	0/0:11,0:10:21.06:0,21,237	0/0:2,0:25:69.02:0,69,360	0/0:5,0:25:54.89:0,55,311	0/0:1,0:22:48.88:0,49,249	0/0:7,0:32:61.74:0,62,344	0/0:1,0:22:51.72:0,52,263	1/1:1,29:30:87.13:835,87,0	1/1:0,22:22:63.10:606,63,0	1/1:2,21:23:60.09:579,60,0	1/1:3,32:35:93.15:898,93,0	1/1:0,20:20:54.09:522,54,0	0/0:21,0:21:57.17:0,57,688	1/1:0,17:17:45.07:435,45,0	1/1:3,20:23:51.08:492,51,0	1/1:2,11:13:30.05:290,30,0	0/0:4,0:26:71.57:0,72,374	0/0:2,0:31:86.44:0,86,456	0/0:1,0:9:25.68:0,26,128	1/1:0,19:19:54.09:521,54,0	1/1:3,13:16:33.05:319,33,0	1/1:1,22:23:63.10:608,63,0	1/1:0,21:21:63.10:608,63,0	1/1:3,19:22:57.09:550,57,0	0/0:4,0:43:99:0,106,550	1/1:0,20:20:54.09:522,54,0
chr10	31905215	.	T	TTTTA	6370.09	PASS	AB=1.000;AC=34;AF=0.607;AN=56;BaseQRankSum=7.931;DP=551;FS=1.832;HRun=0;HaplotypeScore=130.8007;InbreedingCoeff=0.5858;MQ=69.46;MQ0=9;MQRankSum=-4.081;QD=17.89;ReadPosRankSum=-5.655;VQSLOD=3.4080;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:38,0:37:17.39:200,17,0	0/1:9,0:9:61.28:61,0,145	0/0:27,0:20:45.01:0,45,712	0/0:26,0:23:35.18:0,35,692	0/0:19,0:19:2.37:0,2,460	0/0:16,0:16:19.59:0,20,261	0/1:21,0:20:33.18:33,0,270	0/0:23,0:22:51.11:0,51,763	0/1:25,0:25:99:128,0,395	1/1:16,0:14:36.11:639,36,0	1/1:13,0:13:22.29:264,22,0	1/1:16,2:18:45.36:734,45,0	1/1:19,2:20:19.42:300,19,0	1/1:24,0:24:15.99:286,16,0	0/1:24,0:24:99:124,0,435	1/1:16,1:17:18.06:321,18,0	1/1:11,0:11:26.57:391,27,0	1/1:20,1:20:48.11:753,48,0	0/0:22,0:22:32.24:0,32,679	0/0:24,0:24:20.70:0,21,679	0/0:21,0:21:34.46:0,34,539	1/1:24,0:23:36.53:427,37,0	1/1:17,0:17:14.96:189,15,0	1/1:13,2:15:34.34:521,34,0	1/1:18,0:18:6.02:102,6,0	1/1:19,0:19:51.17:840,51,0	0/0:17,0:17:0.30:0,0,462	1/1:5,0:4:3.01:57,3,0
chr10	31905221	.	T	TTATTTGT	3117.84	PASS	AB=0.722;AC=25;AF=0.446;AN=56;BaseQRankSum=9.231;DP=637;FS=0.397;HRun=0;HaplotypeScore=199.4324;InbreedingCoeff=0.3389;MQ=62.61;MQ0=16;MQRankSum=-4.363;QD=8.78;ReadPosRankSum=-4.644;VQSLOD=1.5026;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:11,1:44:10.16:189,0,10	0/1:5,0:11:2.96:3,0,270	0/0:22,0:15:45.15:0,45,1064	0/0:24,0:21:35.30:0,35,1112	0/0:18,0:28:46.09:0,46,813	0/0:16,0:15:22.43:0,22,513	0/0:14,0:25:32.86:0,33,511	0/0:25,0:23:52.88:0,53,1151	0/0:14,0:26:43.91:0,44,789	0/1:18,0:19:14.53:281,0,15	1/1:5,0:14:6.30:250,6,0	1/1:16,0:22:43.56:339,44,0	0/1:7,0:24:14.68:162,0,15	1/1:5,0:27:12.33:210,12,0	0/0:15,0:33:52.87:0,53,949	1/1:4,0:19:12.75:202,13,0	1/1:11,0:11:20.21:154,20,0	0/1:20,0:22:8.51:222,0,9	0/0:24,0:26:41.16:0,41,1141	0/0:24,0:24:14.38:0,14,1133	0/0:29,0:28:23.55:0,24,834	0/1:9,0:26:26.17:391,0,26	1/1:3,0:21:16.83:196,17,0	1/1:15,0:16:27.38:257,27,0	0/1:5,0:21:86.40:93,0,86	0/1:23,0:24:18.62:262,0,19	0/1:16,0:21:45.53:46,0,820	1/1:2,0:5:2.63:55,3,0
chr10	31905850	.	CTTAG	C	17138.74	PASS	AB=0.509;AC=29;AF=0.518;AN=56;BaseQRankSum=21.134;DP=757;FS=1.241;HRun=0;HaplotypeScore=163.7859;InbreedingCoeff=0.9460;MQ=67.16;MQ0=0;MQRankSum=-6.092;QD=43.28;ReadPosRankSum=4.956;VQSLOD=5.4764;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,36:41:90.31:1674,90,0	0/0:9,0:9:27.09:0,27,720	0/0:32,0:30:60.59:0,61,1889	0/0:20,0:19:42.14:0,42,1110	0/0:39,0:39:99:0,111,2928	0/0:31,0:31:93.32:0,93,2420	0/0:25,0:25:66.20:0,66,1575	0/0:26,0:26:69.23:0,69,1776	0/0:32,0:32:93.32:0,93,2456	1/1:2,20:22:60.19:1089,60,0	1/1:7,19:26:36.12:672,36,0	1/1:3,21:24:57.20:1054,57,0	1/1:3,38:41:96.33:1791,96,0	1/1:2,30:32:75.26:1399,75,0	0/0:39,0:39:99:0,114,3036	0/1:1,26:27:4.78:1260,0,5	1/1:2,25:27:54.19:1008,54,0	1/1:2,24:26:52.28:1260,52,0	0/0:26,0:26:78.27:0,78,2029	0/0:22,0:22:63.22:0,63,1672	0/0:33,0:33:99:0,99,2633	1/1:1,21:22:63.22:1175,63,0	1/1:4,28:32:63.22:1175,63,0	1/1:2,19:21:48.16:896,48,0	1/1:2,22:24:57.20:1063,57,0	1/1:1,20:21:60.21:1118,60,0	0/0:27,0:27:69.24:0,69,1812	1/1:1,9:10:27.09:504,27,0
chr10	31906249	.	A	AT	8484.97	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-12.600;DP=485;FS=2.144;HRun=6;HaplotypeScore=43.7137;InbreedingCoeff=0.9800;MQ=67.61;MQ0=3;MQRankSum=0.623;QD=31.19;ReadPosRankSum=3.839;VQSLOD=5.1257;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,35:38:99:1245,99,0	0/0:8,0:8:21.04:0,21,214	0/0:7,0:7:18.03:0,18,174	0/0:10,0:10:17.48:0,17,165	0/0:27,0:27:75.16:0,75,760	0/0:16,0:16:39.08:0,39,398	0/0:15,0:15:39.07:0,39,391	0/0:32,0:29:66.10:0,66,653	0/0:15,0:15:33.07:0,33,337	1/1:2,25:27:75.06:907,75,0	1/1:2,15:17:45.10:548,45,0	1/1:1,11:12:27.09:340,27,0	1/1:2,12:14:33.11:414,33,0	1/1:1,13:14:36.12:453,36,0	0/0:12,0:12:30.06:0,30,301	1/1:2,17:19:39.12:491,39,0	1/1:1,26:27:72.23:906,72,0	1/1:2,17:19:45.14:566,45,0	0/0:19,0:18:51.05:0,51,497	0/0:15,0:15:45.06:0,45,440	0/0:11,0:11:27.04:0,27,269	1/1:2,5:7:15.05:189,15,0	1/1:2,14:17:42.13:527,42,0	1/1:0,4:4:6.02:75,6,0	1/1:1,19:20:57.18:717,57,0	1/1:5,20:25:60.19:755,60,0	0/0:26,0:25:66.06:0,66,642	1/1:1,11:12:29.93:353,30,0
chr10	31907091	.	T	TA	1622.83	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-6.816;DP=540;FS=0.000;HRun=12;HaplotypeScore=72.6695;InbreedingCoeff=0.8801;MQ=72.89;MQ0=0;MQRankSum=0.224;QD=15.03;ReadPosRankSum=-0.250;VQSLOD=4.2308;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:22:55.63:0,56,395	1/1:2,1:3:3:29,3,0	0/0:13,0:15:14.83:0,15,86	0/0:8,0:8:5.24:0,5,23	1/1:8,21:29:14.01:425,14,0	1/1:8,10:17:11.33:270,11,0	1/1:3,13:16:17.16:328,17,0	0/0:33,0:33:64.69:0,65,471	1/1:3,18:22:48.06:459,48,0	0/0:23,0:24:52.68:0,53,377	0/0:28,0:29:47.14:0,47,339	0/0:20,1:21:18.47:0,18,295	0/0:14,1:16:14.57:0,15,255	0/0:17,0:17:37.86:0,38,281	1/1:3,16:20:13.99:284,14,0	0/0:20,0:20:47.65:0,48,348	0/0:29,0:29:68.54:0,69,503	0/0:23,0:23:41.67:0,42,306	0/0:18,0:19:48.31:0,48,326	0/0:22,0:22:53.58:0,54,385	0/0:3,0:3:5.96:0,6,44	0/0:20,1:23:34.54:0,35,396	0/0:13,0:15:34.82:0,35,244	0/0:7,0:7:8.94:0,9,66	0/0:32,0:32:76.57:0,77,564	0/0:24,0:24:41.66:0,42,305	0/0:19,1:19:18.43:0,18,296	0/0:10,0:10:24.75:0,25,179
chr10	31907679	.	ATGG	A	2134.90	PASS	AB=0.977;AC=24;AF=0.429;AN=56;BaseQRankSum=16.189;DP=603;FS=0.660;HRun=0;HaplotypeScore=144.0860;InbreedingCoeff=0.4412;MQ=52.44;MQ0=25;MQRankSum=8.861;QD=6.55;ReadPosRankSum=4.383;VQSLOD=2.7137;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:35,1:36:2.14:224,2,0	0/0:4,0:3:9.03:0,9,222	0/0:10,0:2:2.60:0,3,10	0/0:14,0:1:2.98:0,3,22	0/0:11,0:10:30.10:0,30,689	0/0:29,0:29:87.28:0,87,2037	0/0:26,0:24:69.24:0,69,1645	0/0:29,0:27:81.18:0,81,1884	0/0:19,0:18:54.19:0,54,1294	0/1:27,1:28:5.67:237,0,6	1/1:17,1:18:16.50:132,17,0	1/1:28,0:27:5.49:189,5,0	0/1:23,0:23:5.73:136,0,6	1/1:12,0:11:17.44:158,17,0	0/0:21,0:20:60.21:0,60,1476	0/1:18,0:17:35.94:60,0,36	1/1:30,1:31:27.74:292,28,0	0/1:30,2:31:99:241,0,122	0/0:35,0:27:81.26:0,81,1932	0/0:20,0:20:60.21:0,60,1473	0/0:29,0:28:78.25:0,78,1869	0/1:20,1:21:50.04:98,0,50	0/1:19,0:18:5.40:84,0,5	1/1:24,1:25:9.92:148,10,0	1/1:8,1:9:1.88:99,2,0	1/1:20,0:19:6.23:188,6,0	0/0:30,0:29:87.30:0,87,2130	1/1:6,0:6:5.64:35,6,0
chr10	31907889	.	CGTGTGTGTGTGT	C	1333.29	PASS	AB=0.627;AC=18;AF=0.333;AN=54;BaseQRankSum=0.468;DP=539;FS=7.017;HRun=0;HaplotypeScore=220.4532;InbreedingCoeff=0.6730;MQ=52.43;MQ0=4;MQRankSum=-3.582;QD=10.02;ReadPosRankSum=2.253;VQSLOD=1.8139;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:0.47:0,0,1	0/1:2,0:4:0.32:0,0,6	0/0:35,0:18:12.01:0,12,332	0/0:33,0:19:12.04:0,12,510	1/1:1,0:5:2.50:9,2,0	1/1:5,0:11:3.74:10,4,0	./.	1/1:16,0:16:6:54,6,0	0/1:3,0:10:1.11:1,0,63	0/0:27,0:27:44.78:0,45,1899	0/0:16,0:16:9.01:0,9,164	0/0:22,0:22:27.08:0,27,1010	0/0:24,0:23:36.12:0,36,1683	0/0:24,0:24:30.51:0,31,953	1/1:2,0:8:6.75:54,7,0	0/0:30,0:30:27.09:0,27,1113	0/0:15,0:15:15.05:0,15,752	0/0:17,0:17:18.06:0,18,846	1/1:21,7:27:18.06:549,18,0	1/1:5,12:22:6.02:147,6,0	1/1:9,2:9:3:25,3,0	0/0:22,0:21:6.02:0,6,302	0/0:19,0:19:2.32:0,2,102	0/0:34,0:34:14.39:0,14,581	0/0:17,0:17:18:0,18,812	0/0:31,0:31:63.17:0,63,2727	1/1:9,9:18:21.02:647,21,0	0/0:8,0:8:12.04:0,12,484
chr10	31907911	.	T	TGTGTGA	7473.45	PASS	AB=0.664;AC=26;AF=0.464;AN=56;BaseQRankSum=-5.496;DP=546;FS=18.359;HRun=0;HaplotypeScore=168.8771;InbreedingCoeff=0.5818;MQ=44.35;MQ0=9;MQRankSum=1.734;QD=21.92;ReadPosRankSum=2.832;VQSLOD=3.5665;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:4,27:32:0.01:0,0,0	0/0:4,0:4:7.21:0,7,67	0/0:37,0:9:8.16:0,8,113	0/0:38,0:9:3.62:0,4,136	0/0:6,0:6:3.01:0,3,37	0/0:10,0:10:9.92:0,10,138	0/0:5,0:5:2.97:0,3,20	0/0:18,0:18:31.20:0,31,248	0/0:12,0:12:21.91:0,22,275	1/1:1,20:24:38.52:992,39,0	0/0:5,9:18:2.78:0,3,20	0/1:6,14:22:2.34:325,0,2	1/1:5,17:26:7.54:869,8,0	1/1:6,15:23:1.21:426,1,0	0/0:14,0:14:24.91:0,25,282	1/1:2,19:23:24.01:667,24,0	1/1:6,14:22:21.07:618,21,0	1/1:1,11:16:18.06:419,18,0	0/0:15,0:13:29.07:0,29,300	0/1:21,0:21:10.95:11,0,60	0/0:15,0:14:6.46:0,6,49	1/1:1,16:21:5.84:150,6,0	1/1:1,17:19:2.46:52,2,0	1/1:2,22:28:13.60:245,14,0	1/1:1,15:19:8.55:457,9,0	1/1:4,24:37:99:1960,99,0	0/0:13,0:13:17.79:0,18,260	0/1:1,4:6:3.75:282,0,4
chr10	31907913	.	T	TGTGA	4195.04	PASS	AB=0.972;AC=20;AF=0.357;AN=56;BaseQRankSum=1.098;DP=530;FS=1.759;HRun=0;HaplotypeScore=165.6416;InbreedingCoeff=0.2724;MQ=44.05;MQ0=9;MQRankSum=-1.735;QD=12.56;ReadPosRankSum=5.172;VQSLOD=2.9933;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:33:0.06:0,0,0	0/0:4,0:4:7.21:0,7,53	0/0:36,0:8:14:0,14,141	0/0:37,0:8:10.26:0,10,138	0/0:6,0:6:3.01:0,3,37	0/0:10,0:10:9.02:0,9,95	0/0:5,0:5:2.97:0,3,20	0/0:16,0:16:38.87:0,39,325	0/0:11,0:11:21.01:0,21,205	0/1:24,0:24:59.44:574,0,59	0/0:17,0:17:5.21:0,5,44	0/1:19,2:22:2.11:314,0,2	0/1:25,0:25:12.17:456,0,12	0/1:18,1:19:2.22:300,0,2	0/0:14,0:14:24.02:0,24,226	1/1:19,0:19:24.01:401,24,0	0/1:23,0:23:2.89:283,0,3	1/1:15,0:15:18.02:284,18,0	0/0:14,0:12:29.05:0,29,245	0/1:20,0:20:10.95:11,0,47	0/0:14,0:13:5.83:0,6,49	1/1:22,0:21:5.75:84,6,0	0/1:18,0:19:19.31:66,0,19	1/1:28,0:28:12.34:150,12,0	1/1:19,0:19:7.87:267,8,0	0/1:38,1:39:99:844,0,222	0/0:12,0:12:20.89:0,21,206	0/1:6,0:6:4.54:161,0,5
chr10	31908229	.	C	CA	15169.08	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=17.730;DP=722;FS=12.584;HRun=1;HaplotypeScore=99.8446;InbreedingCoeff=0.9957;MQ=83.84;MQ0=0;MQRankSum=-0.137;QD=41.33;ReadPosRankSum=4.925;VQSLOD=3.7248;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,40:41:99:1754,117,0	0/0:15,0:15:39.13:0,39,506	0/0:22,0:22:66.19:0,66,827	0/0:26,0:26:42.91:0,43,755	0/0:21,0:21:63.19:0,63,802	0/0:33,0:33:99:0,99,1285	0/0:30,0:30:90.26:0,90,1139	0/0:37,0:37:99:0,108,1376	0/0:24,0:24:72.23:0,72,932	1/1:3,32:35:93.32:1394,93,0	1/1:0,20:20:57.19:854,57,0	1/1:0,15:15:42.14:630,42,0	1/1:1,22:23:63.21:944,63,0	1/1:0,24:24:72.24:1079,72,0	0/0:28,0:28:81.26:0,81,1052	1/1:2,27:29:75.25:1124,75,0	1/1:0,32:32:84.28:1259,84,0	1/1:3,14:17:48.08:669,48,0	0/0:18,0:18:51.16:0,51,650	0/0:30,0:30:78.25:0,78,1011	0/0:41,0:41:99:0,123,1582	1/1:0,23:24:69.23:1018,69,0	1/1:1,22:23:69.23:1027,69,0	1/1:2,33:35:96.33:1439,96,0	1/1:1,15:16:36.12:539,36,0	1/1:1,28:29:84.28:1259,84,0	0/0:30,0:30:90.27:0,90,1152	1/1:0,4:4:12.04:180,12,0
chr10	31911818	.	GTCCTTCCTTCCT	G	1717.91	PASS	AB=0.886;AC=19;AF=0.452;AN=42;BaseQRankSum=2.424;DP=617;FS=20.741;HRun=0;HaplotypeScore=204.2587;InbreedingCoeff=0.3350;MQ=70.51;MQ0=7;MQRankSum=-2.449;QD=6.25;ReadPosRankSum=0.492;VQSLOD=1.4465;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:27,7:34:0:0,0,0	./.	./.	./.	0/0:18,0:21:14.01:0,14,129	0/0:24,0:24:12.04:0,12,627	0/0:23,0:23:2.94:0,3,52	./.	0/1:32,0:35:17.09:17,0,1085	0/1:31,3:34:94.13:168,0,94	./.	1/1:15,2:17:6.02:202,6,0	1/1:16,1:17:3.01:101,3,0	1/1:10,7:17:15.01:363,15,0	0/0:23,0:28:9.97:0,10,342	1/1:14,5:18:5.47:202,5,0	0/0:20,0:20:0.89:0,1,2	0/1:10,3:13:71.38:95,0,71	./.	0/0:18,0:18:9.03:0,9,432	0/0:26,0:26:6.02:0,6,96	1/1:31,0:31:6:51,6,0	0/0:22,0:27:4.32:0,4,73	0/1:23,4:27:7.30:95,0,7	./.	1/1:12,4:16:12.04:364,12,0	0/0:16,0:16:9.03:0,9,307	1/1:13,2:15:6.02:202,6,0
chr10	31913701	.	C	CCAGT	7709.29	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=6.535;DP=616;FS=11.209;HRun=0;HaplotypeScore=137.5025;InbreedingCoeff=0.9980;MQ=81.14;MQ0=0;MQRankSum=-14.741;QD=67.63;ReadPosRankSum=-4.214;VQSLOD=5.3679;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,126,2359	0/0:9,0:9:21.04:0,21,341	0/0:19,0:18:42.14:0,42,774	0/0:20,0:20:47.93:0,48,756	0/0:37,0:37:99:0,108,2057	0/0:27,0:27:75.25:0,75,1420	0/0:21,0:21:60.16:0,60,1021	1/1:9,18:34:93.31:2413,93,0	0/0:19,0:19:57.18:0,57,1066	0/0:21,0:21:63.21:0,63,1192	0/0:21,0:21:57.20:0,57,1102	0/0:14,0:14:42.14:0,42,791	0/0:15,0:15:45.15:0,45,857	0/0:22,0:22:60.21:0,60,1163	0/0:35,0:35:99:0,99,1820	0/0:30,0:30:87.28:0,87,1620	0/0:34,0:34:99:0,99,1882	0/0:17,0:17:48.16:0,48,930	1/1:3,14:20:60.21:1537,60,0	1/1:3,24:28:75.26:2017,75,0	1/1:2,9:13:24.08:641,24,0	0/0:15,0:15:45.13:0,45,804	0/0:11,0:11:33.11:0,33,622	0/0:28,0:28:78.26:0,78,1470	0/0:21,0:21:63.22:0,63,1206	0/0:16,0:16:48.16:0,48,929	1/1:2,13:19:42.14:1101,42,0	0/0:8,0:8:24.08:0,24,465
chr10	31914551	.	C	CATGT	6730.11	PASS	AB=0.874;AC=33;AF=0.589;AN=56;BaseQRankSum=-3.274;DP=640;FS=0.775;HRun=0;HaplotypeScore=170.9267;InbreedingCoeff=0.4768;MQ=57.96;MQ0=5;MQRankSum=-0.573;QD=13.35;ReadPosRankSum=0.102;VQSLOD=4.1845;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,0:43:16.87:343,17,0	0/0:4,0:10:26.66:0,27,233	0/0:28,0:16:45.30:0,45,389	0/0:15,0:8:19.95:0,20,146	0/0:12,0:30:65.36:0,65,589	0/0:9,0:13:35.89:0,36,331	0/0:7,0:9:17.96:0,18,161	0/1:34,0:32:53.45:458,0,53	0/0:7,0:15:41.66:0,42,416	1/1:6,0:28:34.62:526,35,0	1/1:3,0:20:29.85:239,30,0	1/1:2,9:17:18.06:444,18,0	1/1:3,0:22:13.01:237,13,0	0/1:8,0:25:18.86:170,0,19	0/0:5,0:15:33.02:0,33,359	0/1:2,0:22:12.82:159,0,13	1/1:5,0:34:30.13:418,30,0	1/1:2,0:22:38.57:297,39,0	0/1:23,0:24:55.98:305,0,56	0/1:32,0:34:99:138,0,345	0/1:23,0:23:54.40:54,0,220	1/1:2,0:22:23.85:180,24,0	1/1:2,0:17:21.05:453,21,0	1/1:10,1:21:48.13:1120,48,0	1/1:2,0:27:41.85:403,42,0	1/1:20,0:26:39.14:551,39,0	0/1:22,0:24:99:125,0,229	1/1:2,0:14:14.92:112,15,0
chr10	31914580	.	G	GTA	9760.06	PASS	AB=1.000;AC=33;AF=0.589;AN=56;BaseQRankSum=0.211;DP=705;FS=5.746;HRun=0;HaplotypeScore=184.1093;InbreedingCoeff=0.4802;MQ=52.02;MQ0=13;MQRankSum=1.712;QD=18.88;ReadPosRankSum=1.390;VQSLOD=4.3493;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:45,0:44:58.14:816,58,0	0/0:10,0:10:23.73:0,24,162	0/0:48,0:20:53.87:0,54,479	0/0:36,0:10:29.95:0,30,267	0/0:37,0:37:88.63:0,89,627	0/0:17,0:17:38.79:0,39,294	0/0:12,0:12:17.91:0,18,138	0/1:39,0:38:88.68:415,0,89	0/0:13,0:13:29.66:0,30,203	1/1:30,0:30:61.79:840,62,0	1/1:24,0:24:42.02:587,42,0	1/1:12,5:16:40.50:361,41,0	1/1:19,0:17:32.21:563,32,0	0/1:23,0:23:41.87:430,0,42	0/0:15,0:14:32.77:0,33,239	1/1:22,0:22:18.92:477,19,0	1/1:28,1:28:58.34:1002,58,0	1/1:19,0:19:48.23:668,48,0	0/1:22,0:22:66.04:66,0,110	0/1:40,0:40:99:136,0,231	0/1:35,0:35:99:223,0,118	1/1:23,0:22:32.58:442,33,0	1/1:13,5:18:32.91:348,33,0	1/1:24,9:33:68.92:700,69,0	1/1:24,1:25:57.10:861,57,0	0/1:18,0:18:50.76:439,0,51	0/1:28,0:28:85.78:86,0,124	1/1:7,0:7:21.03:300,21,0
chr10	31915409	.	G	GT	14196	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=11.295;DP=585;FS=14.024;HRun=6;HaplotypeScore=82.7828;InbreedingCoeff=0.9940;MQ=70.51;MQ0=3;MQRankSum=-0.370;QD=32.63;ReadPosRankSum=3.012;VQSLOD=3.7608;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,11:15:33.11:434,33,0	0/0:7,0:7:21.05:0,21,226	0/0:17,0:12:15.06:0,15,224	0/0:25,0:16:19.38:0,19,185	0/0:17,0:17:45.10:0,45,475	0/0:21,0:21:63.13:0,63,659	0/0:17,0:17:42.09:0,42,443	1/1:7,12:19:36.09:445,36,0	0/0:19,0:19:48.12:0,48,516	1/1:2,31:33:93.26:1203,93,0	1/1:3,23:26:66.21:862,66,0	1/1:1,15:16:42.11:532,42,0	1/1:2,14:16:33.11:434,33,0	1/1:1,17:18:45.15:592,45,0	0/0:27,0:27:72.16:0,72,765	1/1:2,16:18:42.14:553,42,0	1/1:6,19:25:51.14:654,51,0	1/1:1,20:21:50.90:644,51,0	1/1:2,18:19:48.16:629,48,0	1/1:1,39:40:99:1535,117,0	1/1:2,8:10:18.06:237,18,0	1/1:1,22:23:63.20:829,63,0	1/1:2,25:27:69.22:908,69,0	1/1:0,16:16:42.14:552,42,0	1/1:0,23:23:60.20:790,60,0	1/1:1,22:23:66.21:867,66,0	1/1:2,32:34:87.28:1141,87,0	1/1:0,12:11:27.09:355,27,0
chr10	31915972	.	G	GAGAC	20423.03	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-1.518;DP=664;FS=13.850;HRun=0;HaplotypeScore=172.8951;InbreedingCoeff=0.9926;MQ=67.99;MQ0=0;MQRankSum=-9.022;QD=44.69;ReadPosRankSum=2.009;VQSLOD=4.9542;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,24:30:43.93:1067,44,0	0/0:5,0:5:12.04:0,12,201	0/0:43,0:40:36.18:0,36,958	0/0:34,0:32:30.78:0,31,661	0/0:27,0:27:75.17:0,75,1177	0/0:28,0:28:69.21:0,69,1143	0/0:24,0:24:60.15:0,60,923	1/1:4,20:25:60.08:1141,60,0	0/0:20,0:20:45.13:0,45,752	1/1:8,33:41:96.05:2111,96,0	1/1:10,8:18:28.33:648,28,0	1/1:5,19:25:44.97:1145,45,0	1/1:8,14:24:44.05:956,44,0	1/1:5,15:21:39.11:981,39,0	0/0:26,0:26:69.19:0,69,1116	1/1:4,13:17:33.11:834,33,0	1/1:4,12:16:32.70:769,33,0	1/1:2,10:12:24.08:617,24,0	1/1:3,14:16:44.99:751,45,0	1/1:7,14:21:32.45:834,32,0	1/1:8,19:27:27.09:678,27,0	1/1:10,21:31:51.31:1283,51,0	1/1:5,21:26:53.96:1357,54,0	1/1:4,15:19:21.07:525,21,0	1/1:7,23:30:69.23:1732,69,0	1/1:11,13:25:51.12:1203,51,0	1/1:5,20:25:56.76:1273,57,0	1/1:1,6:7:21.07:517,21,0
chr10	31916000	.	A	AAGAGGG	15768.58	PASS	AB=1.000;AC=41;AF=0.732;AN=56;BaseQRankSum=10.084;DP=653;FS=0.919;HRun=0;HaplotypeScore=261.6406;InbreedingCoeff=0.8581;MQ=58.63;MQ0=5;MQRankSum=-12.776;QD=34.96;ReadPosRankSum=-1.919;VQSLOD=3.9366;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:19,4:23:37.10:839,37,0	0/0:5,0:5:12.04:0,12,257	0/0:46,0:31:22.24:0,22,415	0/0:46,0:35:33.38:0,33,493	0/0:22,0:22:36.07:0,36,646	0/0:27,0:27:63.16:0,63,1261	0/0:27,0:27:63.19:0,63,1246	1/1:28,0:25:28.25:519,28,0	0/1:22,0:22:49.86:50,0,776	1/1:39,4:42:68.49:2024,68,0	1/1:18,2:20:38.57:916,39,0	1/1:23,1:24:30:690,30,0	1/1:16,2:19:27.09:823,27,0	1/1:14,4:18:23.84:780,24,0	0/0:28,0:28:54.17:0,54,1079	1/1:17,2:20:48.51:1237,49,0	1/1:13,0:13:18.03:354,18,0	1/1:5,3:8:12:279,12,0	1/1:24,0:23:40.76:1055,41,0	1/1:18,1:19:21.04:535,21,0	1/1:17,2:19:5.91:196,6,0	1/1:29,3:33:34.84:1120,35,0	1/1:19,5:24:33.04:670,33,0	1/1:11,2:13:9.03:167,9,0	1/1:22,3:24:24.08:552,24,0	1/1:19,4:23:42.39:1018,42,0	1/1:21,5:26:57.19:1700,57,0	1/1:6,1:7:9.03:245,9,0
chr10	31916018	.	G	GA	1058.96	PASS	AB=0.820;AC=20;AF=0.357;AN=56;BaseQRankSum=12.924;DP=609;FS=12.483;HRun=0;HaplotypeScore=262.0324;InbreedingCoeff=-0.3551;MQ=56.08;MQ0=5;MQRankSum=-11.536;QD=2.82;ReadPosRankSum=6.515;VQSLOD=1.5437;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:13,7:20:56.71:57,0,73	0/0:4,0:4:12.04:0,12,168	0/0:42,0:24:38.33:0,38,632	0/0:39,0:26:28.56:0,29,540	0/0:14,0:14:42.08:0,42,516	0/0:29,0:29:81.07:0,81,1068	0/0:31,0:31:90.27:0,90,1199	0/0:32,0:29:53.57:0,54,360	0/0:20,1:21:45.18:0,45,769	0/1:30,7:36:99:121,0,251	0/1:12,8:20:54.56:55,0,70	0/1:16,5:21:66.23:73,0,66	1/1:9,6:15:10.55:122,11,0	0/1:17,5:22:37.15:37,0,99	0/0:21,0:21:63.18:0,63,847	0/1:13,8:21:71.28:118,0,71	0/1:8,3:11:32.78:33,0,56	0/1:6,0:5:0.19:0,0,12	0/1:17,7:23:94.61:95,0,256	0/1:12,5:17:66.84:67,0,70	0/1:17,1:18:12.62:13,0,39	0/1:20,10:30:7.31:126,0,7	0/1:23,2:25:10.65:11,0,74	0/1:10,2:12:8.17:8,0,33	0/1:14,3:16:36.74:37,0,75	0/1:18,5:23:65.15:107,0,65	0/1:23,8:30:99:124,0,172	0/1:4,1:5:17.98:18,0,22
chr10	31916019	.	G	GAGGGGGAGA	14585.63	PASS	AB=0.727;AC=30;AF=0.536;AN=56;BaseQRankSum=11.711;DP=621;FS=5.987;HRun=0;HaplotypeScore=286.0221;InbreedingCoeff=0.1267;MQ=56.67;MQ0=5;MQRankSum=-12.170;QD=33.15;ReadPosRankSum=2.796;VQSLOD=3.8443;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:10,7:20:28.37:878,0,28	0/0:4,0:4:12.04:0,12,389	0/0:42,0:23:50.37:0,50,1130	0/0:40,0:27:30.54:0,31,915	0/0:14,0:14:36.11:0,36,1041	0/0:29,0:29:70.64:0,71,2138	0/0:28,0:31:90.31:0,90,2506	0/1:21,0:30:99:156,0,226	0/1:20,1:21:61.67:62,0,1512	0/1:23,7:37:54.53:1458,0,55	0/1:7,8:20:42.81:803,0,43	1/1:9,3:21:44.14:835,44,0	1/1:8,5:16:38.16:1153,38,0	1/1:15,5:23:44.55:1037,45,0	0/0:21,0:21:63.19:0,63,1734	1/1:11,6:22:33.48:1288,33,0	1/1:5,3:10:18.44:466,18,0	1/1:5,0:5:11.76:134,12,0	0/1:14,0:23:99:597,0,282	0/1:10,0:17:48.71:368,0,49	0/1:11,0:18:47.71:75,0,48	1/1:16,9:30:50.29:1521,50,0	1/1:17,1:27:20.16:732,20,0	0/1:9,2:14:12.04:244,0,12	0/1:14,2:16:36.22:397,0,36	1/1:15,5:25:4.22:1251,4,0	0/1:15,0:31:68.61:909,0,69	0/1:3,1:6:6.17:223,0,6
chr10	31916346	.	TC	T	4521.17	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=9.607;DP=703;FS=0.358;HRun=3;HaplotypeScore=73.3483;InbreedingCoeff=0.9986;MQ=73.38;MQ0=0;MQRankSum=-0.845;QD=33.74;ReadPosRankSum=-1.658;VQSLOD=4.5492;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:57:99:0,166,2308	0/0:7,0:7:21.07:0,21,302	0/0:25,0:22:57.18:0,57,794	0/0:29,0:29:50.65:0,51,791	0/0:16,0:16:48.15:0,48,672	0/0:19,0:19:57.18:0,57,802	0/0:26,0:26:78.23:0,78,1080	1/1:3,23:26:69.19:830,69,0	0/0:26,0:26:75.24:0,75,1060	0/0:28,0:28:84.28:0,84,1203	0/0:19,0:19:54.18:0,54,762	0/0:22,0:22:66.22:0,66,942	0/0:26,0:26:75.20:0,75,1037	0/0:30,0:30:84.28:0,84,1205	0/0:32,0:32:96.30:0,96,1342	0/0:35,0:35:93.30:0,93,1318	0/0:31,0:31:90.30:0,90,1289	0/0:16,0:16:48.16:0,48,689	1/1:1,22:23:66.18:793,66,0	1/1:0,24:24:66.21:815,66,0	1/1:1,32:33:87.27:1079,87,0	0/0:23,0:23:69.22:0,69,971	0/0:19,0:19:57.19:0,57,819	0/0:25,0:25:75.25:0,75,1078	0/0:27,0:27:81.27:0,81,1162	0/0:23,0:23:69.23:0,69,989	1/1:0,28:28:81.25:1004,81,0	0/0:8,0:8:24.08:0,24,341
chr10	31917094	.	T	TGTGTGG	15050.20	PASS	AB=0.996;AC=32;AF=0.571;AN=56;BaseQRankSum=5.710;DP=699;FS=0.317;HRun=0;HaplotypeScore=156.3875;InbreedingCoeff=0.4392;MQ=71.25;MQ0=1;MQRankSum=-6.530;QD=30.40;ReadPosRankSum=7.341;VQSLOD=4.3218;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:31,0:31:32.66:557,0,33	0/0:14,0:14:39.09:0,39,855	0/0:33,0:31:87.21:0,87,1547	0/0:32,0:30:67.52:0,68,1437	0/0:22,0:22:66.19:0,66,1353	0/0:23,0:23:66.15:0,66,1386	0/0:26,0:26:78.17:0,78,1567	1/1:2,25:34:89.77:2180,90,0	0/0:25,0:25:72.21:0,72,1551	1/1:38,0:38:21.91:1222,22,0	1/1:15,0:15:6.45:341,6,0	1/1:28,0:29:47.59:915,48,0	1/1:22,0:22:16.90:604,17,0	1/1:20,0:20:10.38:443,10,0	0/0:29,0:29:87.26:0,87,1955	0/1:22,0:22:6.99:453,0,7	0/1:25,0:25:22.80:488,0,23	0/1:20,0:20:17.13:483,0,17	1/1:2,11:18:48.09:1152,48,0	1/1:2,14:22:30.10:958,30,0	1/1:3,17:35:6.02:215,6,0	0/1:21,0:21:6.99:449,0,7	0/1:21,0:21:1.36:514,0,1	1/1:32,0:32:55.39:1053,55,0	0/1:40,0:40:39.26:861,0,39	0/1:28,0:28:10.35:773,0,10	1/1:0,13:15:33.11:1185,33,0	1/1:6,0:6:15.05:205,15,0
chr10	31917577	.	C	CA	16600.43	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=12.508;DP=674;FS=13.309;HRun=4;HaplotypeScore=94.8662;InbreedingCoeff=0.9986;MQ=55.74;MQ0=4;MQRankSum=-0.766;QD=33.54;ReadPosRankSum=0.472;VQSLOD=3.8032;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,40:41:90.30:1230,90,0	0/0:8,0:8:24.07:0,24,272	0/0:17,0:10:27.01:0,27,286	0/0:15,0:9:24.02:0,24,257	0/0:20,0:20:45.12:0,45,509	0/0:32,0:32:75.19:0,75,840	0/0:23,0:23:60.16:0,60,670	1/1:3,33:36:99:1324,99,0	0/0:33,0:32:75.21:0,75,850	1/1:2,19:21:57.05:701,57,0	1/1:1,14:15:33.11:451,33,0	1/1:3,28:31:75.25:1021,75,0	1/1:0,18:18:45.04:615,45,0	1/1:2,21:23:63.21:848,63,0	0/0:31,0:31:75.20:0,75,840	1/1:3,31:34:50.24:1070,50,0	1/1:1,37:38:95.68:1275,96,0	1/1:1,21:22:57.19:775,57,0	1/1:6,19:24:51.13:659,51,0	1/1:1,16:17:45.15:616,45,0	1/1:2,33:35:93.31:1272,93,0	1/1:1,19:20:57.19:770,57,0	1/1:1,10:11:23.87:328,24,0	1/1:2,35:37:90.30:1231,90,0	1/1:2,10:12:30.10:410,30,0	1/1:4,23:27:66.22:899,66,0	1/1:2,19:21:48.16:654,48,0	1/1:0,11:11:33.11:451,33,0
chr10	31918190	.	AGT	A	1026.16	PASS	AB=0.927;AC=18;AF=0.333;AN=54;BaseQRankSum=-0.364;DP=576;FS=7.136;HRun=0;HaplotypeScore=144.4042;InbreedingCoeff=0.1995;MQ=59.02;MQ0=18;MQRankSum=1.867;QD=3.43;ReadPosRankSum=-1.369;VQSLOD=1.3973;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:1.55:0,2,4	0/1:8,1:9:16.13:16,0,207	0/0:38,0:17:9.48:0,9,95	0/0:31,0:14:3.01:0,3,39	0/1:15,2:16:19.14:19,0,168	0/1:23,5:27:83.68:84,0,510	0/1:29,0:31:9.18:9,0,444	1/1:24,1:25:9.28:198,9,0	1/1:4,8:13:14.87:151,15,0	0/1:33,0:33:7.65:8,0,16	0/0:9,0:9:2.99:0,3,24	0/0:21,0:21:7.45:0,7,49	0/0:15,0:14:6.61:0,7,35	0/0:16,0:15:14.49:0,14,99	0/1:20,1:21:1.08:1,0,425	0/0:11,0:11:2.98:0,3,22	0/0:18,0:18:4.33:0,4,39	0/0:15,0:15:7.20:0,7,45	0/1:11,1:12:7.66:90,0,8	1/1:15,2:17:8.04:99,8,0	1/1:47,2:48:44.97:444,45,0	0/0:22,0:22:5.98:0,6,47	./.	0/0:18,0:18:10.19:0,10,69	0/1:19,0:19:2.71:3,0,41	0/0:19,0:19:12.80:0,13,87	1/1:11,12:22:6.01:64,6,0	0/0:3,0:3:3.63:0,4,9
chr10	31918206	.	T	TGCGC	5749.03	PASS	AB=1.000;AC=26;AF=0.464;AN=56;BaseQRankSum=3.165;DP=542;FS=48.574;HRun=0;HaplotypeScore=130.0963;InbreedingCoeff=0.7782;MQ=49.38;MQ0=47;MQRankSum=2.336;QD=25.67;ReadPosRankSum=1.746;VQSLOD=2.6899;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:24:21.05:457,21,0	0/0:8,0:7:21.07:0,21,380	0/0:28,0:8:14.92:0,15,232	0/0:24,0:8:21.06:0,21,328	0/0:15,0:13:30.08:0,30,493	0/0:30,0:29:72.21:0,72,1208	0/0:27,0:25:56.98:0,57,1009	0/0:31,0:30:90.24:0,90,1252	0/0:19,0:16:30.10:0,30,413	1/1:3,23:27:16.29:962,16,0	1/1:7,0:6:6.02:83,6,0	1/1:16,0:16:30:384,30,0	1/1:11,0:9:13.60:227,14,0	1/1:19,0:15:32.81:489,33,0	0/0:25,0:22:54.66:0,55,973	1/1:11,0:9:6.01:76,6,0	1/1:17,0:16:9.79:541,10,0	0/1:16,0:15:10.94:434,0,11	0/0:15,0:14:37.86:0,38,426	0/0:15,0:12:21.05:0,21,277	0/0:47,0:44:74.40:0,74,983	1/1:21,0:20:33.11:631,33,0	0/0:13,0:12:0:0,0,0	1/1:14,0:14:24:397,24,0	1/1:20,0:18:5.11:401,5,0	1/1:15,0:13:39.08:544,39,0	0/0:21,0:19:24.48:0,24,290	0/1:5,0:4:13.52:122,0,14
chr10	31918242	.	C	CGT	288.16	PASS	AB=0.942;AC=8;AF=0.154;AN=52;BaseQRankSum=1.746;DP=474;FS=9.116;HRun=0;HaplotypeScore=118.6565;InbreedingCoeff=0.1261;MQ=50.23;MQ0=43;MQRankSum=-0.387;QD=2.23;ReadPosRankSum=-1.807;VQSLOD=1.4551;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:23.34:0,23,151	0/0:5,0:4:3.01:0,3,38	0/1:22,0:7:4.50:4,0,54	0/0:30,0:7:13.95:0,14,121	0/0:16,0:14:36.12:0,36,460	0/0:32,0:31:76.99:0,77,989	0/0:29,0:27:66.19:0,66,832	0/1:18,0:18:36.04:158,0,36	0/0:22,0:18:36.10:0,36,451	0/0:17,0:16:42.34:0,42,299	0/0:11,0:10:5.94:0,6,41	0/0:11,0:11:3.86:0,4,23	./.	0/0:17,0:14:14.63:0,15,91	0/0:23,0:21:48.12:0,48,587	0/0:6,0:4:2.90:0,3,16	0/0:17,0:17:36.93:0,37,273	0/1:14,0:13:0:0,0,0	0/1:14,0:12:19.12:59,0,19	0/1:8,0:6:12.03:53,0,12	0/1:20,16:31:1.33:53,0,1	0/0:11,0:10:8.11:0,8,58	0/0:15,0:15:5.94:0,6,19	0/0:18,0:18:15.84:0,16,89	0/0:12,0:10:7.68:0,8,36	0/0:12,0:9:8.10:0,8,44	1/1:15,0:12:0.81:76,1,0	./.
chr10	31918250	.	TGC	T	3187.81	PASS	AB=0.976;AC=39;AF=0.696;AN=56;BaseQRankSum=5.018;DP=517;FS=32.243;HRun=0;HaplotypeScore=112.8759;InbreedingCoeff=0.4805;MQ=52.14;MQ0=35;MQRankSum=-1.712;QD=8.28;ReadPosRankSum=-3.990;VQSLOD=0.8768;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:29,1:30:41.78:415,42,0	0/1:4,0:4:3.43:3,0,18	0/1:34,0:12:24.99:25,0,154	0/1:47,2:18:99:122,0,183	0/0:16,0:15:27.44:0,27,583	0/0:32,0:31:66.32:0,66,1246	0/0:29,0:28:74.79:0,75,1104	0/1:16,1:17:29.53:197,0,30	0/0:20,0:18:26.22:0,26,579	1/1:18,1:18:6.14:308,6,0	1/1:12,3:14:10.02:77,10,0	1/1:12,0:12:8.99:89,9,0	1/1:1,10:10:2.88:15,3,0	1/1:17,0:14:14.97:123,15,0	0/0:22,0:20:33.26:0,33,815	1/1:8,0:7:11.99:102,12,0	1/1:18,0:18:39.54:322,40,0	0/0:2,11:12:2.50:0,2,9	1/1:5,12:15:22.96:268,23,0	0/1:8,0:6:12.01:50,0,12	1/1:31,1:30:4.03:60,4,0	1/1:17,0:16:29.41:259,29,0	1/1:8,1:9:9.50:135,10,0	1/1:17,2:19:20.55:214,21,0	1/1:13,2:14:20.97:193,21,0	1/1:2,11:11:17.97:155,18,0	1/1:12,0:9:6.81:107,7,0	1/1:7,0:6:17.90:135,18,0
chr10	31918252	.	CGT	C	184.58	PASS	AB=0.965;AC=21;AF=0.389;AN=54;BaseQRankSum=4.747;DP=521;FS=0.000;HRun=0;HaplotypeScore=122.0032;InbreedingCoeff=0.0235;MQ=52.44;MQ0=34;MQRankSum=-0.210;QD=0.71;ReadPosRankSum=0.512;VQSLOD=2.3216;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:31,0:31:6.95:56,0,7	0/1:2,1:3:27.63:28,0,63	0/0:38,0:13:19.03:0,19,309	0/0:48,0:18:33.62:0,34,303	0/0:17,1:17:5.47:0,5,546	0/0:32,0:31:26.53:0,27,912	0/0:30,0:29:60.18:0,60,918	0/0:19,0:19:15.78:0,16,271	0/1:17,1:16:3.56:4,0,411	0/1:20,0:19:19.44:19,0,101	0/0:16,0:15:8.50:0,9,71	1/1:12,0:12:1.78:15,2,0	0/0:11,0:10:1.82:0,2,5	0/0:18,0:15:2.99:0,3,26	0/1:21,2:21:19.15:19,0,696	1/1:8,0:7:0.81:2,1,0	0/1:18,0:18:17.59:18,0,40	./.	0/1:15,0:14:6.22:6,0,41	0/0:8,0:6:8.89:0,9,81	0/1:29,0:27:3.50:4,0,46	0/1:17,0:16:4.29:23,0,4	1/1:9,0:9:9.37:61,9,0	1/1:19,0:19:6.30:44,6,0	0/1:16,0:15:16.32:21,0,16	1/1:13,0:11:0.45:5,0,0	0/1:10,0:7:5.95:6,0,31	0/0:7,0:6:0.90:0,1,2
chr10	31918764	.	C	CAGAGAGAGAGGG	33215.56	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-7.206;DP=637;FS=2.211;HRun=0;HaplotypeScore=172.9333;InbreedingCoeff=0.9817;MQ=59.68;MQ0=2;MQRankSum=-13.927;QD=74.14;ReadPosRankSum=1.143;VQSLOD=4.3851;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:16,36:55:66.23:3526,66,0	0/0:5,0:5:15.05:0,15,446	0/0:25,0:18:26.31:0,26,674	0/0:32,0:24:52.71:0,53,1203	0/0:30,0:30:78.22:0,78,2238	0/0:26,0:26:77.94:0,78,2592	0/0:19,0:19:45.15:0,45,1468	1/1:22,0:22:51.61:1532,52,0	0/0:28,0:28:81.27:0,81,2767	1/1:11,18:30:69.24:3617,69,0	1/1:8,10:21:15.01:653,15,0	1/1:1,21:25:36.12:2113,36,0	1/1:2,14:16:27.09:1633,27,0	1/1:3,13:18:24.08:1322,24,0	0/0:24,0:24:68.88:0,69,2089	1/1:6,9:17:24.08:1223,24,0	1/1:5,15:23:18.06:850,18,0	1/1:1,8:10:15.05:820,15,0	1/1:7,12:27:72.02:2360,72,0	1/1:8,17:26:51.08:2323,51,0	1/1:9,17:29:18.53:846,19,0	1/1:8,21:30:45.15:2367,45,0	1/1:3,19:22:33.11:1312,33,0	1/1:7,18:26:15.05:908,15,0	1/1:1,5:6:15.05:675,15,0	1/1:5,6:11:30.10:1310,30,0	1/1:4,19:25:51.65:2895,52,0	1/1:3,6:9:18.02:930,18,0
chr10	31919619	.	A	AAT	5093.79	PASS	AB=0.541;AC=24;AF=0.429;AN=56;BaseQRankSum=16.099;DP=631;FS=23.208;HRun=0;HaplotypeScore=119.2846;InbreedingCoeff=0.5357;MQ=77.72;MQ0=1;MQRankSum=-2.567;QD=15.07;ReadPosRankSum=6.660;VQSLOD=3.0655;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,0:14:32.85:246,33,0	0/0:11,0:11:33.08:0,33,465	0/0:16,0:16:47.99:0,48,609	0/0:12,0:12:33.05:0,33,460	0/0:38,0:38:99:0,114,1771	0/0:30,0:30:84.19:0,84,1305	0/0:17,0:17:51.12:0,51,751	0/0:29,0:29:84.23:0,84,1269	0/0:22,0:22:66.20:0,66,1019	1/1:0,0:23:62.50:427,63,0	1/1:0,0:20:50.92:373,51,0	1/1:2,0:22:10.93:326,11,0	1/1:1,0:23:25.25:344,25,0	1/1:1,0:22:37.85:419,38,0	0/0:33,0:33:99:0,99,1513	1/1:3,0:29:3.26:431,3,0	0/1:4,0:22:33.57:314,0,34	1/1:2,0:25:16.13:392,16,0	0/0:15,0:15:45.14:0,45,706	0/0:21,0:21:63.21:0,63,997	0/0:24,0:24:69.18:0,69,1045	0/1:2,0:19:27.70:252,0,28	0/1:7,0:37:78.19:423,0,78	0/1:4,0:29:16.44:457,0,16	0/1:2,0:20:10.24:245,0,10	0/1:5,1:27:60.58:336,0,61	0/0:25,0:25:75.14:0,75,1103	1/1:0,0:5:14.92:110,15,0
chr10	31920294	.	A	AAGAGAG	2638.97	PASS	AB=0.902;AC=43;AF=0.860;AN=50;BaseQRankSum=-3.026;DP=543;FS=0.000;HRun=0;HaplotypeScore=134.5608;InbreedingCoeff=0.3349;MQ=63.73;MQ0=21;MQRankSum=1.343;QD=5.93;ReadPosRankSum=0.793;VQSLOD=2.5337;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:28:9.01:112,9,0	1/1:11,0:10:6:82,6,0	./.	./.	1/1:27,0:27:6.02:129,6,0	1/1:20,0:20:5.69:92,6,0	1/1:18,0:18:7.78:153,8,0	0/1:18,0:17:0:0,0,0	0/1:15,5:20:35.85:90,0,36	1/1:16,8:23:32.60:501,33,0	0/0:17,0:16:1.33:0,1,4	1/1:19,0:19:14.97:181,15,0	1/1:15,0:14:0.45:1,0,0	0/1:7,0:7:0:0,0,0	0/1:13,0:13:0:0,0,0	1/1:13,0:13:9:113,9,0	1/1:14,0:14:9.36:108,9,0	1/1:6,0:14:6.84:58,7,0	1/1:19,0:19:17.55:211,18,0	1/1:22,0:22:11.39:165,11,0	./.	1/1:13,0:12:6.37:108,6,0	1/1:23,0:23:8.57:157,9,0	0/1:11,6:19:0:0,0,0	1/1:19,0:19:4.48:60,4,0	1/1:30,0:30:27.94:211,28,0	1/1:27,0:27:18.95:196,19,0	1/1:8,0:5:0.89:2,1,0
chr10	31920700	.	T	TA	2679.30	PASS	AB=0.933;AC=11;AF=0.196;AN=56;BaseQRankSum=8.535;DP=516;FS=3.241;HRun=9;HaplotypeScore=86.0560;InbreedingCoeff=0.9269;MQ=71.77;MQ0=1;MQRankSum=-2.277;QD=22.14;ReadPosRankSum=-1.559;VQSLOD=3.6821;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:92.97:0,93,807	0/0:7,0:7:14.99:0,15,130	0/0:15,0:14:32.96:0,33,279	0/1:13,0:11:1.16:1,0,62	0/0:29,0:29:80.96:0,81,700	0/0:13,0:14:35.03:0,35,292	0/0:21,0:21:59.99:0,60,520	1/1:3,21:24:63.13:672,63,0	0/0:20,0:20:59.99:0,60,521	0/0:14,0:14:35.99:0,36,312	0/0:9,0:9:20.98:0,21,182	0/0:22,0:22:47.96:0,48,416	0/0:19,0:19:41.84:0,42,358	0/0:11,0:11:20.98:0,21,182	0/0:20,0:20:47.99:0,48,417	0/0:20,0:20:41.97:0,42,361	0/0:20,0:20:50.98:0,51,443	0/0:30,0:30:83.13:0,83,695	1/1:2,15:17:42.10:456,42,0	1/1:2,16:18:48.13:530,48,0	1/1:1,8:9:24.06:265,24,0	0/0:8,0:8:24:0,24,208	0/0:11,0:11:26.99:0,27,234	0/0:22,0:22:56.93:0,57,483	0/0:11,0:11:23.99:0,24,207	0/0:25,0:26:62.01:0,62,527	1/1:10,28:39:87.04:930,87,0	0/0:9,0:10:29.03:0,29,240
chr10	31921536	.	TA	T	15666.30	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=14.797;DP=570;FS=9.494;HRun=2;HaplotypeScore=154.6664;InbreedingCoeff=0.9942;MQ=80.87;MQ0=0;MQRankSum=-3.793;QD=35.44;ReadPosRankSum=2.982;VQSLOD=3.1872;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,34:35:90.29:1165,90,0	0/0:4,0:4:12.04:0,12,180	0/0:20,0:20:51.17:0,51,719	0/0:14,0:14:36.12:0,36,536	0/0:10,0:10:30.10:0,30,449	0/0:18,0:18:54.18:0,54,807	0/0:21,0:21:63.21:0,63,937	1/1:1,31:32:93.27:1178,93,0	0/0:16,0:16:48.16:0,48,717	1/1:0,13:13:39.13:505,39,0	1/1:1,12:13:30.10:389,30,0	1/1:0,24:24:66.21:857,66,0	1/1:1,18:19:51.17:662,51,0	1/1:2,19:21:57.18:740,57,0	0/0:25,0:25:75.25:0,75,1123	1/1:0,19:19:51.16:656,51,0	1/1:0,31:31:87.28:1129,87,0	1/1:1,14:15:36.12:467,36,0	1/1:0,29:29:87.27:1115,87,0	1/1:0,33:33:87.28:1124,87,0	1/1:0,32:32:90.29:1169,90,0	1/1:0,14:14:39.13:506,39,0	1/1:1,11:12:26.91:350,27,0	1/1:0,29:29:81.26:1046,81,0	1/1:0,14:14:39.13:506,39,0	1/1:0,23:23:66.21:854,66,0	1/1:2,23:25:69.22:896,69,0	1/1:0,9:9:27.09:350,27,0
chr10	31923719	.	TC	T	12496.31	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=14.564;DP=583;FS=83.639;HRun=2;HaplotypeScore=108.4040;InbreedingCoeff=0.9891;MQ=90.55;MQ0=0;MQRankSum=-13.182;QD=32.54;ReadPosRankSum=0.944;VQSLOD=-0.3920;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,22:25:51.16:658,51,0	0/0:8,0:8:24.08:0,24,359	0/0:33,0:33:90.27:0,90,1282	0/0:33,0:31:78.25:0,78,1107	0/0:19,0:19:57.19:0,57,854	0/0:20,0:20:60.19:0,60,879	0/0:26,0:26:72.24:0,72,1078	1/1:3,23:26:75.21:953,75,0	0/0:24,0:24:66.21:0,66,965	1/1:2,25:27:81.25:1037,81,0	1/1:3,12:15:24.06:297,24,0	1/1:3,25:28:72.19:905,72,0	1/1:4,11:15:42.11:510,42,0	1/1:4,19:22:60.19:766,60,0	0/0:36,0:36:99:0,108,1579	1/1:0,11:11:30.10:389,30,0	1/1:2,23:25:66.21:843,66,0	1/1:0,9:9:27.09:350,27,0	1/1:2,15:17:48.16:623,48,0	1/1:0,17:17:33.11:428,33,0	1/1:5,23:28:60.18:764,60,0	1/1:1,21:22:51.16:655,51,0	1/1:0,14:14:39.13:506,39,0	1/1:3,17:20:51.11:622,51,0	1/1:0,13:13:27.09:350,27,0	1/1:1,17:18:54.17:690,54,0	1/1:0,27:27:81.26:1049,81,0	1/1:0,4:4:9.01:101,9,0
chr10	31923739	.	A	AG	11114.87	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=14.762;DP=572;FS=101.042;HRun=3;HaplotypeScore=124.6033;InbreedingCoeff=0.9760;MQ=81.98;MQ0=0;MQRankSum=-14.492;QD=29.72;ReadPosRankSum=-0.236;VQSLOD=-0.2652;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,26:29:66.22:910,66,0	0/0:6,0:6:18.06:0,18,216	0/0:31,0:30:78.64:0,79,895	0/0:39,0:37:69.32:0,69,882	0/0:23,0:23:69.21:0,69,825	0/0:24,0:24:69.21:0,69,825	0/0:21,0:21:60.18:0,60,720	1/1:5,18:23:54.18:754,54,0	0/0:20,0:20:60.17:0,60,705	1/1:7,21:29:69.23:952,69,0	1/1:2,12:14:24.08:324,24,0	1/1:8,23:31:75.17:979,75,0	1/1:2,10:12:33.08:440,33,0	1/1:2,21:23:63.17:858,63,0	0/0:34,0:34:93.27:0,93,1098	1/1:5,5:10:18:213,18,0	1/1:3,16:19:42.10:564,42,0	1/1:3,7:10:27.06:341,27,0	1/1:4,14:18:36.12:496,36,0	1/1:1,9:10:15.05:208,15,0	1/1:4,17:21:23.54:313,24,0	1/1:2,17:19:45.11:600,45,0	1/1:1,20:20:45.15:627,45,0	1/1:7,13:20:42.03:508,42,0	1/1:3,11:14:24.08:335,24,0	1/1:1,18:18:48.16:667,48,0	1/1:9,21:30:69.22:942,69,0	1/1:0,2:2:6.02:84,6,0
chr10	31923829	.	GCTCA	G	13386.03	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=17.282;DP=462;FS=60.843;HRun=0;HaplotypeScore=151.1507;InbreedingCoeff=0.9884;MQ=83.60;MQ0=0;MQRankSum=-16.875;QD=50.32;ReadPosRankSum=-0.168;VQSLOD=2.8663;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,18:18:42.14:879,42,0	0/0:14,0:14:42.14:0,42,1215	0/0:23,0:23:69.24:0,69,1758	0/0:19,0:19:50.30:0,50,1360	0/0:26,0:26:72.23:0,72,2010	0/0:27,0:27:78.27:0,78,2243	0/0:39,0:39:99:0,117,3332	1/1:0,13:13:36.11:716,36,0	0/0:21,0:21:63.22:0,63,1711	1/1:1,18:19:48.16:998,48,0	1/1:1,15:16:33.11:678,33,0	1/1:0,12:12:33.11:672,33,0	1/1:0,7:7:21.07:431,21,0	1/1:1,14:14:42.14:847,42,0	0/0:27,0:27:81.28:0,81,2330	1/1:0,19:19:54.19:1131,54,0	1/1:0,8:8:21.07:434,21,0	1/1:0,6:6:18.06:377,18,0	1/1:0,9:9:24.08:493,24,0	1/1:0,16:16:42.14:829,42,0	1/1:2,8:12:27.09:478,27,0	1/1:1,24:25:54.19:1084,54,0	1/1:0,22:22:45.15:870,45,0	1/1:0,6:6:12.04:251,12,0	1/1:0,17:17:42.14:879,42,0	1/1:0,10:10:24.08:496,24,0	1/1:1,10:11:27.09:535,27,0	1/1:0,5:5:15.05:308,15,0
chr10	31923992	.	GTTGTTA	G	6126.18	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=13.951;DP=295;FS=8.583;HRun=0;HaplotypeScore=135.2180;InbreedingCoeff=0.9225;MQ=91.38;MQ0=0;MQRankSum=-13.584;QD=42.84;ReadPosRankSum=3.060;VQSLOD=4.6083;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,5:6:18.04:284,18,0	0/0:11,0:11:33.11:0,33,1241	0/0:20,0:20:54.02:0,54,1701	0/0:15,0:15:32.49:0,32,962	0/0:24,0:24:72.20:0,72,2459	0/0:23,0:23:69.24:0,69,2561	0/0:22,0:22:66.23:0,66,2340	1/1:2,3:5:9.22:163,9,0	0/0:16,0:16:48.16:0,48,1645	1/1:0,5:5:15.05:267,15,0	1/1:1,7:8:18.06:307,18,0	1/1:0,11:11:30.10:521,30,0	1/1:0,4:4:12.04:199,12,0	1/1:0,6:6:12.04:207,12,0	0/0:21,0:21:63.20:0,63,2168	1/1:0,8:8:24.08:417,24,0	1/1:1,7:8:15.05:260,15,0	1/1:2,3:5:9.03:161,9,0	1/1:1,2:3:6.02:108,6,0	1/1:0,13:13:39.13:671,39,0	1/1:0,6:6:18.05:266,18,0	1/1:1,8:10:30.09:484,30,0	1/1:0,10:10:27.09:461,27,0	1/1:1,9:10:21.07:358,21,0	1/1:0,8:8:24.08:415,24,0	1/1:3,5:8:17.93:252,18,0	1/1:2,5:7:14.35:233,14,0	1/1:0,2:2:6.02:93,6,0
chr10	31923999	.	CCTGT	C	4095.01	PASS	AB=0.609;AC=29;AF=0.518;AN=56;BaseQRankSum=14.181;DP=322;FS=15.394;HRun=0;HaplotypeScore=143.7369;InbreedingCoeff=0.2115;MQ=88.04;MQ0=0;MQRankSum=-13.291;QD=24.67;ReadPosRankSum=4.856;VQSLOD=2.3646;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:3,5:8:37.81:170,0,38	0/0:11,0:11:33.11:0,33,956	0/0:23,0:23:57.03:0,57,1412	0/0:19,0:18:38.78:0,39,833	0/0:24,0:24:72.25:0,72,2055	0/0:24,0:24:72.23:0,72,2013	0/0:20,0:20:60.19:0,60,1655	0/1:7,3:10:96:96,0,137	0/0:16,0:16:48.16:0,48,1284	0/1:3,5:8:21.93:175,0,22	1/1:2,7:9:18.06:221,18,0	0/1:1,11:12:5.78:346,0,6	1/1:0,4:4:12.03:142,12,0	1/1:0,6:6:12.04:150,12,0	0/0:19,0:19:57.20:0,57,1553	1/1:0,8:8:24.08:304,24,0	0/1:2,7:9:57.71:168,0,58	0/1:4,3:7:84.72:101,0,85	0/1:1,2:3:30.85:70,0,31	1/1:0,13:13:39.12:486,39,0	1/1:3,6:9:1.76:162,2,0	0/1:3,8:11:6.77:299,0,7	1/1:0,10:10:27.09:333,27,0	0/1:5,9:14:49.67:231,0,50	0/1:3,8:11:2.21:275,0,2	1/1:1,5:6:12.39:160,12,0	0/1:1,5:6:24:141,0,24	1/1:0,2:2:6.01:64,6,0
chr10	31924031	.	TC	T	4997.11	PASS	AC=38;AF=0.704;AN=54;BaseQRankSum=13.009;DP=392;FS=0.914;HRun=6;HaplotypeScore=132.4047;InbreedingCoeff=0.9410;MQ=73.40;MQ0=3;MQRankSum=-10.681;QD=22.11;ReadPosRankSum=-1.181;VQSLOD=2.8411;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,22:22:47.87:447,48,0	0/0:8,0:8:21.07:0,21,274	0/0:33,0:24:3.58:0,4,383	0/0:30,0:27:30.84:0,31,563	0/0:23,0:23:60.16:0,60,737	0/0:19,0:19:57.09:0,57,707	0/0:21,0:21:51.12:0,51,621	1/1:3,19:22:51.10:530,51,0	0/0:15,0:15:39.12:0,39,496	1/1:0,12:12:33.07:346,33,0	1/1:1,9:10:23.31:197,23,0	1/1:2,10:12:26.82:257,27,0	1/1:1,5:6:11.99:116,12,0	1/1:0,6:6:11.98:115,12,0	0/0:17,0:17:45.14:0,45,573	1/1:2,10:12:24.05:257,24,0	1/1:1,11:12:27:274,27,0	1/1:1,9:10:20.97:200,21,0	1/1:3,7:9:15.01:152,15,0	1/1:2,13:15:36.02:361,36,0	1/1:2,12:14:29.92:281,30,0	1/1:1,12:13:36.01:359,36,0	1/1:2,7:9:20.97:199,21,0	1/1:1,17:18:38.91:374,39,0	1/1:2,11:13:30.04:308,30,0	1/1:0,4:4:9.02:96,9,0	1/1:0,6:6:12.03:128,12,0	./.
chr10	31924202	.	ATTTATTTG	A	4847.89	PASS	AB=0.956;AC=30;AF=0.536;AN=56;BaseQRankSum=7.264;DP=356;FS=2.180;HRun=0;HaplotypeScore=200.1979;InbreedingCoeff=0.2498;MQ=50.73;MQ0=3;MQRankSum=-9.845;QD=19.95;ReadPosRankSum=-0.872;VQSLOD=4.1880;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:13,1:14:29.93:364,30,0	0/0:11,0:11:31.64:0,32,1167	0/0:11,0:7:18.02:0,18,318	0/0:11,0:9:18.05:0,18,231	0/0:18,0:17:51.17:0,51,2048	0/0:20,0:20:54.17:0,54,2003	0/0:11,0:11:33.11:0,33,1423	1/1:19,3:22:39.88:550,40,0	0/0:16,0:16:48.13:0,48,1856	0/1:15,2:17:14.87:439,0,15	0/1:16,2:18:71.27:167,0,71	0/1:10,2:12:23.44:228,0,23	0/1:13,0:13:76.71:327,0,77	0/1:7,0:7:82.24:100,0,82	0/0:15,0:15:45.14:0,45,1748	0/1:13,0:13:84.18:96,0,84	1/1:6,0:6:6.46:58,6,0	1/1:9,0:9:11.36:115,11,0	1/1:12,0:11:26.91:351,27,0	1/1:8,1:9:14.94:155,15,0	1/1:4,0:4:0.94:2,1,0	0/1:8,0:8:72.76:95,0,73	0/1:10,0:10:68.81:135,0,69	0/1:9,0:9:6.40:77,0,6	1/1:13,0:13:25.87:351,26,0	0/1:25,3:28:29.53:492,0,30	1/1:13,1:13:33.04:490,33,0	1/1:5,0:5:12.04:256,12,0
chr10	31924212	.	TGG	T	4208	PASS	AB=0.840;AC=35;AF=0.648;AN=54;BaseQRankSum=11.696;DP=338;FS=14.954;HRun=2;HaplotypeScore=174.0388;InbreedingCoeff=0.6566;MQ=57.20;MQ0=3;MQRankSum=-12.327;QD=20.53;ReadPosRankSum=2.383;VQSLOD=0.4550;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,6:10:23.10:311,23,0	0/0:13,0:13:39.12:0,39,745	0/0:18,0:14:36.64:0,37,684	0/0:12,0:10:20.61:0,21,322	0/0:20,0:19:57.20:0,57,1139	0/0:17,0:17:51.17:0,51,1004	0/0:13,0:13:39.13:0,39,778	0/1:21,0:23:27.90:28,0,374	0/0:19,0:19:57.20:0,57,1125	1/1:8,8:17:43.17:488,43,0	1/1:8,6:14:18.90:254,19,0	1/1:5,5:10:20.41:273,20,0	1/1:4,9:13:38.61:399,39,0	1/1:5,1:6:8.77:107,9,0	0/0:19,0:19:57.20:0,57,1136	1/1:6,3:9:4.43:159,4,0	1/1:0,3:3:3.01:49,3,0	0/1:3,1:4:21.81:83,0,22	0/1:9,0:11:99:127,0,118	1/1:8,0:10:8.44:136,8,0	./.	1/1:4,3:7:9.59:134,10,0	1/1:6,3:9:24.17:242,24,0	1/1:4,3:7:3.34:81,3,0	1/1:0,9:9:27.09:354,27,0	1/1:13,9:22:53.87:589,54,0	1/1:10,1:16:26.37:269,26,0	1/1:0,4:4:11.88:126,12,0
chr10	31924213	.	G	GTGT	1611.43	PASS	AB=0.911;AC=22;AF=0.407;AN=54;BaseQRankSum=10.568;DP=339;FS=0.533;HRun=0;HaplotypeScore=193.3153;InbreedingCoeff=0.4142;MQ=57.12;MQ0=3;MQRankSum=-9.740;QD=11.35;ReadPosRankSum=1.291;VQSLOD=3.4427;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:10,0:10:20.15:88,0,20	0/0:12,0:12:36.12:0,36,671	0/0:19,0:15:27.12:0,27,570	0/0:12,0:10:16.58:0,17,274	0/0:20,0:19:57.20:0,57,1035	0/0:18,0:18:51.17:0,51,927	0/0:13,0:13:39.13:0,39,722	0/0:23,0:23:62.87:0,63,883	0/0:19,0:19:57.18:0,57,1020	0/1:12,5:17:99:204,0,139	1/1:11,3:14:13.41:222,13,0	1/1:8,2:10:9.57:124,10,0	1/1:14,0:14:0.41:208,0,0	1/1:4,2:6:5.99:129,6,0	0/0:19,0:19:57.20:0,57,1044	1/1:5,2:9:16.08:199,16,0	0/0:3,0:3:2.97:0,3,20	0/1:4,0:4:62.04:63,0,62	0/0:12,0:11:22.94:0,23,304	0/0:10,0:10:6.28:0,6,51	./.	1/1:3,3:7:14.42:145,14,0	0/1:7,2:9:3.93:117,0,4	1/1:4,3:7:7.91:73,8,0	1/1:10,0:10:1.99:25,2,0	0/1:18,2:21:99:187,0,219	0/0:15,0:14:15.02:0,15,110	0/1:4,0:4:8.30:8,0,38
chr10	31924224	.	C	CTG	4710.75	PASS	AC=34;AF=0.680;AN=50;BaseQRankSum=13.236;DP=365;FS=16.972;HRun=0;HaplotypeScore=188.3410;InbreedingCoeff=0.8786;MQ=55.07;MQ0=2;MQRankSum=-12.567;QD=23.09;ReadPosRankSum=2.442;VQSLOD=4.2975;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/0:11,0:11:33.09:0,33,415	0/0:25,0:20:51.07:0,51,621	0/0:14,0:11:20.65:0,21,236	0/0:20,0:20:42.14:0,42,545	0/0:19,0:19:51.14:0,51,635	0/0:13,0:13:36.10:0,36,453	1/1:14,22:36:89:1364,89,0	0/0:21,0:21:48.16:0,48,624	1/1:19,0:19:49.92:432,50,0	1/1:15,0:15:20.73:228,21,0	1/1:10,0:10:9.03:107,9,0	1/1:14,0:14:20.71:198,21,0	1/1:6,0:6:15.04:173,15,0	0/0:17,0:17:48.13:0,48,596	1/1:9,0:9:18.05:203,18,0	1/1:3,0:3:2.22:7,2,0	1/1:3,1:4:8.69:67,9,0	1/1:12,0:12:33.09:398,33,0	1/1:13,0:13:23.93:245,24,0	./.	1/1:7,0:7:12.04:144,12,0	1/1:8,0:8:18.06:243,18,0	1/1:7,0:7:2.97:35,3,0	./.	1/1:20,1:21:49.09:467,49,0	1/1:16,0:15:33.09:375,33,0	1/1:4,0:4:2.99:24,3,0
chr10	31924226	.	G	GTA	6971.05	PASS	AB=0.892;AC=35;AF=0.648;AN=54;BaseQRankSum=14.439;DP=486;FS=30.052;HRun=0;HaplotypeScore=308.0225;InbreedingCoeff=0.7091;MQ=48.69;MQ0=2;MQRankSum=-13.229;QD=20.44;ReadPosRankSum=3.821;VQSLOD=3.6829;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:19:9.03:133,9,0	0/0:11,0:11:33.11:0,33,503	0/0:25,0:19:56.20:0,56,790	0/0:15,0:12:29.68:0,30,389	0/0:20,0:20:57.09:0,57,759	0/0:21,0:21:50.48:0,50,795	0/0:13,0:13:39.12:0,39,573	1/1:41,0:41:57.10:844,57,0	0/0:20,0:20:57.15:0,57,807	0/1:21,5:26:10.07:617,0,10	1/1:22,4:26:32.42:423,32,0	1/1:16,2:18:27.05:423,27,0	1/1:18,4:22:33.43:516,33,0	1/1:11,2:13:9.62:219,10,0	0/0:19,0:19:51.16:0,51,755	1/1:19,3:22:42.07:649,42,0	1/1:8,0:8:3.86:194,4,0	1/1:6,0:6:7.11:113,7,0	1/1:13,1:14:6.81:251,7,0	1/1:12,1:13:23.94:245,24,0	./.	1/1:12,3:15:21.07:369,21,0	1/1:7,5:12:26.86:353,27,0	1/1:9,3:12:8.98:155,9,0	1/1:18,0:18:21.01:296,21,0	0/1:25,6:31:10.34:732,0,10	1/1:13,3:15:16.50:329,16,0	0/1:9,0:9:6.35:113,0,6
chr10	31924230	.	G	GTGTGTATGTA	19389.06	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=13.708;DP=527;FS=26.711;HRun=0;HaplotypeScore=332.3213;InbreedingCoeff=0.9482;MQ=48.39;MQ0=2;MQRankSum=-14.606;QD=52.26;ReadPosRankSum=4.143;VQSLOD=3.6056;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:19:9.03:246,9,0	0/0:12,0:12:33.10:0,33,1012	0/0:26,0:20:54.09:0,54,1317	0/0:17,0:14:35.13:0,35,665	0/0:17,0:17:51.17:0,51,1451	0/0:21,0:22:62.83:0,63,1462	0/0:15,0:15:39.10:0,39,919	1/1:45,0:45:99:2386,120,0	0/0:19,0:19:57.18:0,57,1610	1/1:26,0:27:78.07:1885,78,0	1/1:24,0:26:31.87:973,32,0	1/1:17,0:18:27.09:861,27,0	1/1:21,0:22:33.93:1102,34,0	1/1:10,0:13:18.06:600,18,0	0/0:23,0:23:63.12:0,63,1604	1/1:21,0:22:42.14:1376,42,0	1/1:8,0:8:15.05:421,15,0	1/1:4,0:6:15.03:491,15,0	1/1:5,9:22:57.37:1651,57,0	1/1:6,9:18:24.08:1200,24,0	0/0:5,0:5:4.78:0,5,18	1/1:15,0:15:21.07:710,21,0	1/1:12,0:13:27.09:852,27,0	1/1:12,0:12:8.94:301,9,0	1/1:19,0:19:21.07:589,21,0	1/1:30,0:32:81.20:2297,81,0	1/1:10,6:24:36.08:1201,36,0	1/1:9,0:9:11.81:248,12,0
chr10	31924232	.	GTA	G	463.39	PASS	AB=0.986;AC=14;AF=0.250;AN=56;BaseQRankSum=4.178;DP=538;FS=1.211;HRun=0;HaplotypeScore=276.2428;InbreedingCoeff=0.0364;MQ=48.44;MQ0=2;MQRankSum=-8.710;QD=1.86;ReadPosRankSum=-1.110;VQSLOD=2.2740;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:19,1:20:0.47:1,0,0	0/0:12,0:12:36.09:0,36,627	0/0:25,0:19:57.10:0,57,954	0/0:17,0:15:40.88:0,41,599	0/0:17,0:17:51.17:0,51,940	0/0:25,0:25:69.60:0,70,1080	0/0:14,0:14:42.10:0,42,707	0/1:43,3:46:99:396,0,141	0/0:20,0:20:60.18:0,60,1048	0/0:28,0:28:17.19:0,17,348	0/1:27,0:27:2.13:24,0,2	0/0:18,0:18:8.40:0,8,57	0/1:22,0:22:8.64:9,0,47	0/0:13,0:13:0.99:0,1,24	0/0:24,0:24:69.13:0,69,1067	0/0:22,0:22:10.36:0,10,61	0/0:8,0:8:2.60:0,3,10	0/1:6,0:6:3.74:4,0,56	0/1:21,0:21:96.61:97,0,301	0/0:21,0:21:16.36:0,16,142	1/1:6,0:6:0.89:2,1,0	0/0:15,0:15:6.23:0,6,57	0/1:13,0:13:17.81:18,0,24	0/1:11,1:12:0.13:0,0,0	0/1:20,0:20:0.01:0,0,0	0/1:30,0:30:25.25:25,0,260	0/1:26,0:25:11.47:11,0,146	0/0:9,0:9:3.02:0,3,33
chr10	31924257	.	TGTGA	T	12796.43	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=16.331;DP=578;FS=16.305;HRun=0;HaplotypeScore=246.0030;InbreedingCoeff=0.9658;MQ=49.00;MQ0=0;MQRankSum=-16.053;QD=31.44;ReadPosRankSum=-6.555;VQSLOD=2.5612;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:3,23:26:42.14:760,42,0	0/0:13,0:13:39.13:0,39,1048	0/0:19,0:16:45.15:0,45,1145	0/0:22,0:20:44.31:0,44,1264	0/0:23,0:23:69.24:0,69,1777	0/0:22,0:22:53.85:0,54,1423	0/0:15,0:15:45.14:0,45,1122	1/1:2,26:28:78.10:1145,78,0	0/0:25,0:25:75.23:0,75,1868	1/1:7,23:30:67.02:1169,67,0	1/1:2,23:25:51.13:791,51,0	1/1:4,16:20:45.15:778,45,0	1/1:6,14:20:45.13:775,45,0	1/1:2,16:18:41.99:656,42,0	0/0:32,0:32:93.32:0,93,2446	1/1:3,24:27:62.39:1130,62,0	1/1:1,8:9:15.05:267,15,0	1/1:1,9:10:18.02:286,18,0	1/1:12,5:17:37.74:403,38,0	1/1:16,6:22:40.85:509,41,0	1/1:1,12:13:5.82:101,6,0	1/1:3,17:20:45.15:744,45,0	1/1:1,16:17:32.54:475,33,0	1/1:2,12:14:9.02:123,9,0	1/1:8,12:20:33.11:574,33,0	1/1:10,27:37:79.25:1389,79,0	1/1:25,2:26:40.03:439,40,0	1/1:2,5:7:15.05:283,15,0
chr10	31927356	.	G	GT	2331.37	PASS	AB=0.747;AC=10;AF=0.179;AN=56;BaseQRankSum=-10.365;DP=691;FS=2.436;HRun=10;HaplotypeScore=69.2600;InbreedingCoeff=0.7684;MQ=70.78;MQ0=0;MQRankSum=2.127;QD=17.53;ReadPosRankSum=-0.882;VQSLOD=4.0352;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:38:85.85:0,86,690	0/0:12,0:13:28.99:0,29,227	0/0:25,0:24:5.85:0,6,246	0/0:16,0:15:8.48:0,8,136	0/0:25,0:25:67.16:0,67,545	0/0:28,0:28:80.90:0,81,664	0/0:23,0:23:56.90:0,57,467	1/1:8,22:30:56.43:679,56,0	0/0:23,0:23:62.92:0,63,517	0/0:37,0:37:83.86:0,84,687	0/0:24,0:24:53.74:0,54,433	0/0:20,0:20:53.88:0,54,434	0/0:29,1:30:44.93:0,45,564	0/0:27,0:27:80.87:0,81,659	0/0:24,0:24:65.91:0,66,541	0/0:28,0:28:68.87:0,69,563	0/0:22,0:22:59.90:0,60,489	0/0:20,0:20:47.91:0,48,391	1/1:4,16:20:48.02:476,48,0	1/1:6,20:25:56.95:578,57,0	1/1:3,15:18:11.45:327,11,0	0/0:25,0:28:55.78:0,56,482	0/0:25,0:27:60.95:0,61,478	0/0:31,0:31:81.31:0,81,658	0/0:20,0:20:41.90:0,42,344	0/0:28,0:28:71.89:0,72,587	0/1:6,17:25:9.85:431,0,10	0/1:11,1:13:1.57:2,0,192
chr10	31929642	.	A	AAAAC	13560.22	PASS	AB=0.581;AC=28;AF=0.500;AN=56;BaseQRankSum=-13.043;DP=654;FS=4.471;HRun=0;HaplotypeScore=98.0339;InbreedingCoeff=0.8277;MQ=63.85;MQ0=5;MQRankSum=0.534;QD=38.20;ReadPosRankSum=1.510;VQSLOD=5.1252;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:14,30:46:22.31:1673,22,0	0/0:15,0:15:45.09:0,45,611	0/0:23,0:19:11.99:0,12,136	0/0:21,0:17:8.20:0,8,149	0/0:19,0:19:36.12:0,36,581	0/0:21,0:21:45.10:0,45,657	0/0:25,0:25:45.08:0,45,621	0/0:39,0:38:41.63:0,42,552	0/0:18,0:18:42.13:0,42,654	1/1:5,20:25:60.18:1315,60,0	0/1:4,10:12:21.64:495,0,22	1/1:7,10:17:24.08:581,24,0	1/1:7,17:24:35.92:872,36,0	1/1:3,21:26:60.21:1449,60,0	0/0:31,0:31:72.21:0,72,1098	0/1:6,16:22:9.51:799,0,10	1/1:7,23:30:42.14:1017,42,0	1/1:4,9:14:20.10:442,20,0	0/0:16,0:15:21.05:0,21,317	0/0:28,0:28:75.20:0,75,1118	0/0:27,0:28:57.15:0,57,832	1/1:6,17:23:5.49:1116,5,0	1/1:11,16:29:22.76:986,23,0	1/1:10,18:27:33.11:799,33,0	1/1:2,13:16:12.04:290,12,0	1/1:10,20:31:63.13:1302,63,0	0/0:15,0:15:30.09:0,30,462	1/1:3,6:9:18.06:424,18,0
chr10	31930073	.	AAAAG	A	14028.20	PASS	AB=0.538;AC=39;AF=0.696;AN=56;BaseQRankSum=10.619;DP=534;FS=2.838;HRun=0;HaplotypeScore=93.4483;InbreedingCoeff=0.9109;MQ=62.84;MQ0=4;MQRankSum=-2.679;QD=37.61;ReadPosRankSum=4.040;VQSLOD=4.7440;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,19:21:34.42:779,34,0	0/0:9,0:9:27.09:0,27,669	0/0:27,0:17:29.95:0,30,684	0/0:20,0:14:26.87:0,27,497	0/0:32,0:32:90.30:0,90,2139	0/0:20,0:20:60.19:0,60,1442	0/0:9,0:9:27.08:0,27,631	1/1:8,18:26:54.16:879,54,0	0/0:19,0:19:54.15:0,54,1294	1/1:1,26:26:75.19:1205,75,0	1/1:1,23:24:54.14:900,54,0	1/1:0,19:19:51.17:879,51,0	1/1:2,8:10:18.06:311,18,0	1/1:1,15:16:36.12:621,36,0	0/0:24,0:24:72.21:0,72,1707	0/1:2,12:13:48.45:387,0,48	1/1:3,18:21:45.15:775,45,0	1/1:1,18:19:45.15:776,45,0	1/1:1,10:10:30.08:460,30,0	1/1:3,22:25:60.10:970,60,0	1/1:1,13:14:30.10:517,30,0	1/1:2,12:14:36.08:589,36,0	1/1:1,27:27:54.18:931,54,0	1/1:2,19:21:42.14:724,42,0	1/1:1,19:20:39.13:669,39,0	1/1:0,11:11:33.09:517,33,0	1/1:1,24:24:51.17:880,51,0	1/1:2,5:6:15.05:259,15,0
chr10	31931683	.	AACACACAC	A	5039.63	PASS	AB=0.912;AC=34;AF=0.630;AN=54;BaseQRankSum=4.786;DP=474;FS=6.335;HRun=0;HaplotypeScore=151.8497;InbreedingCoeff=0.5116;MQ=66.13;MQ0=7;MQRankSum=-2.906;QD=15.18;ReadPosRankSum=3.744;VQSLOD=3.3066;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:23:12.01:158,12,0	0/0:4,0:4:9.03:0,9,333	0/0:23,0:16:6.02:0,6,178	0/1:23,0:17:1.01:1,0,49	0/0:16,0:16:24.07:0,24,755	0/0:12,0:11:21.96:0,22,730	0/0:33,0:33:42.14:0,42,1469	1/1:16,1:22:18.50:332,18,0	0/0:16,0:16:30.10:0,30,1085	0/1:16,0:17:49.52:369,0,50	./.	1/1:17,1:18:17.78:220,18,0	1/1:21,1:22:17.34:257,17,0	1/1:20,0:20:8.74:62,9,0	0/0:28,0:28:54.17:0,54,1857	1/1:17,0:18:16.82:538,17,0	0/1:13,1:14:28.87:86,0,29	0/1:9,1:10:8.23:175,0,8	1/1:9,1:15:21.07:489,21,0	1/1:3,4:7:8.99:157,9,0	1/1:7,0:13:0.47:1,0,0	1/1:15,0:18:20.76:342,21,0	1/1:8,0:7:12.02:195,12,0	0/1:17,0:19:79.87:126,0,80	1/1:14,0:17:23.89:409,24,0	0/1:9,1:11:1.24:211,0,1	1/1:9,13:25:33.11:802,33,0	1/1:1,1:2:6.02:112,6,0
chr10	31931730	.	T	TCACACACACACA	4066.18	PASS	AB=0.884;AC=27;AF=0.540;AN=50;BaseQRankSum=1.001;DP=536;FS=6.138;HRun=0;HaplotypeScore=163.7550;InbreedingCoeff=0.5258;MQ=39.57;MQ0=41;MQRankSum=-4.199;QD=14.37;ReadPosRankSum=-3.462;VQSLOD=1.3689;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:0:0,0,0	0/0:5,0:5:12.04:0,12,373	0/0:18,0:4:12.04:0,12,314	0/0:24,0:6:6.23:0,6,131	0/0:35,0:31:0.47:0,0,1	0/0:26,0:21:45.15:0,45,1402	0/0:40,0:35:1.77:0,2,3	1/1:32,0:21:23:332,23,0	0/0:23,0:20:5.61:0,6,103	1/1:17,0:13:26.88:603,27,0	./.	1/1:14,2:14:9.03:236,9,0	1/1:15,9:21:6.02:268,6,0	1/1:17,0:15:2.59:94,3,0	0/0:25,0:25:51.18:0,51,1747	1/1:10,1:16:6.49:176,6,0	0/1:11,0:10:0:0,0,0	1/1:9,0:6:6.02:253,6,0	1/1:14,0:12:21.07:524,21,0	./.	./.	1/1:21,0:19:4.36:29,4,0	0/1:8,3:10:0:0,0,0	0/1:18,0:17:0.73:1,0,35	0/1:10,0:10:0:0,0,0	0/1:16,1:15:99:695,0,257	1/1:26,0:28:8.95:753,9,0	1/1:7,1:5:3.01:103,3,0
chr10	31931743	.	CACAGAG	C	793.40	PASS	AB=1.000;AC=17;AF=0.315;AN=54;BaseQRankSum=-3.862;DP=528;FS=1.617;HRun=0;HaplotypeScore=121.0731;InbreedingCoeff=0.3014;MQ=39.17;MQ0=35;MQRankSum=3.979;QD=3.41;ReadPosRankSum=0.420;VQSLOD=2.4458;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:20:36.70:90,0,37	1/1:4,0:4:11.98:139,12,0	0/0:18,0:4:11.73:0,12,74	0/0:24,0:6:17.24:0,17,98	1/1:11,26:33:0.62:2,1,0	1/1:27,1:23:33.68:437,34,0	1/1:7,27:31:0.47:1,0,0	0/0:25,0:19:36.45:0,36,219	1/1:5,14:18:9.03:145,9,0	0/1:16,0:13:7.80:8,0,190	0/0:12,0:8:0.69:0,1,2	0/0:20,0:16:5.42:0,5,112	0/0:27,0:23:11.93:0,12,142	0/0:13,0:11:3.37:0,3,17	0/0:23,0:23:51.21:0,51,870	0/1:18,0:16:13.55:14,0,19	1/1:12,0:11:3.30:36,3,0	0/0:8,0:6:6.84:0,7,44	0/0:13,0:11:26.47:0,26,253	0/0:16,0:14:3.01:0,3,45	./.	0/1:20,0:18:33.85:34,0,132	0/0:18,0:14:0:0,0,0	0/0:22,0:18:6.90:0,7,82	0/0:9,0:8:0.89:0,1,2	0/1:19,0:16:39.01:39,0,309	0/0:27,0:26:37.66:0,38,322	0/0:7,0:4:4.50:0,4,22
chr10	31932979	.	A	AAGC	27017.66	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-8.972;DP=709;FS=1.046;HRun=0;HaplotypeScore=113.8100;InbreedingCoeff=0.9806;MQ=91.25;MQ0=0;MQRankSum=-6.510;QD=52.56;ReadPosRankSum=3.798;VQSLOD=7.0727;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,41:46:85.07:2280,85,0	0/0:8,0:8:21.04:0,21,290	0/0:32,0:32:77.26:0,77,1146	0/0:30,0:30:66.99:0,67,988	0/0:24,0:24:69.22:0,69,1087	0/0:21,0:21:63.21:0,63,1012	0/0:24,0:24:66.22:0,66,1048	1/1:6,24:30:72.25:1520,72,0	0/0:22,0:22:57.18:0,57,891	1/1:2,20:22:60.21:1278,60,0	1/1:4,18:21:48.16:1043,48,0	1/1:1,24:26:69.24:1493,69,0	1/1:2,23:25:72.25:1577,72,0	1/1:1,24:25:57.20:1244,57,0	0/0:34,0:34:90.31:0,90,1440	1/1:2,26:28:18:1329,18,0	1/1:0,27:27:75.26:1655,75,0	1/1:2,20:23:60.21:1314,60,0	1/1:6,12:18:42.14:861,42,0	1/1:5,24:29:72.25:1575,72,0	1/1:8,24:32:75.26:1632,75,0	1/1:3,11:14:33.11:700,33,0	1/1:3,23:27:63.09:1375,63,0	1/1:3,33:37:75.26:1643,75,0	1/1:4,16:20:51.18:1088,51,0	1/1:5,21:26:66.23:1389,66,0	1/1:3,32:35:87.30:1889,87,0	1/1:0,2:2:6.02:132,6,0
chr10	31933217	.	T	TA	14061.81	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-15.850;DP=663;FS=1.636;HRun=3;HaplotypeScore=61.4479;InbreedingCoeff=0.9999;MQ=82.13;MQ0=0;MQRankSum=-4.631;QD=39.06;ReadPosRankSum=5.323;VQSLOD=4.6478;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,35:37:93.27:1394,93,0	0/0:11,0:11:33.08:0,33,411	0/0:20,0:20:60.01:0,60,687	0/0:20,0:20:48.07:0,48,682	0/0:20,0:20:57.17:0,57,724	0/0:15,0:15:45.15:0,45,584	0/0:32,0:32:96.31:0,96,1246	0/0:28,0:28:81.25:0,81,1027	0/0:24,0:24:72.23:0,72,934	1/1:0,16:16:45.15:674,45,0	1/1:2,15:17:42.14:630,42,0	1/1:0,27:27:75.25:1124,75,0	1/1:1,25:26:66.22:989,66,0	1/1:0,15:15:39.13:584,39,0	0/0:36,0:36:99:0,108,1374	1/1:0,17:17:42.14:629,42,0	1/1:0,31:31:81.27:1202,81,0	1/1:0,40:40:96.33:1439,96,0	0/0:18,0:18:54.17:0,54,689	0/0:30,0:30:87.27:0,87,1113	0/0:17,0:17:48.16:0,48,623	1/1:0,19:19:54.18:810,54,0	1/1:0,26:26:69.23:1034,69,0	1/1:2,29:31:72.24:1079,72,0	1/1:0,14:14:33.11:495,33,0	1/1:0,33:33:99:1484,99,0	0/0:32,0:32:96.26:0,96,1197	1/1:0,11:11:33.11:494,33,0
chr10	31935174	.	TACACACAC	T	746.05	PASS	AB=0.500;AC=9;AF=0.500;AN=18;BaseQRankSum=3.307;DP=49;FS=4.365;HRun=0;HaplotypeScore=39.0824;MQ=50.49;MQ0=3;MQRankSum=-2.706;QD=23.31;ReadPosRankSum=1.971;VQSLOD=1.8744;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:0,1:1:0:0,0,0	./.	./.	./.	0/0:2,0:2:6.02:0,6,95	./.	0/0:2,0:2:6.02:0,6,94	1/1:10,0:10:11.11:171,11,0	0/0:1,0:1:3.01:0,3,47	./.	./.	./.	./.	./.	0/0:1,0:1:3.01:0,3,96	./.	1/1:2,1:7:6.02:151,6,0	1/1:4,3:8:18.06:408,18,0	./.	./.	./.	./.	./.	./.	./.	./.	1/1:5,0:5:9.03:113,9,0	./.
chr10	31935189	.	ATATG	A	453.31	PASS	AB=1.000;AC=19;AF=0.500;AN=38;BaseQRankSum=0.421;DP=71;FS=1.413;HRun=0;HaplotypeScore=27.8815;InbreedingCoeff=0.5308;MQ=59.22;MQ0=2;MQRankSum=-1.264;QD=14.17;ReadPosRankSum=-0.108;VQSLOD=2.1854;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:0,1:1:0:0,0,0	./.	0/0:1,0:1:3:0,3,28	./.	0/0:5,0:5:15.04:0,15,274	./.	0/0:3,0:3:9.03:0,9,190	0/0:13,0:13:37.97:0,38,314	0/0:2,0:2:3.01:0,3,58	1/1:1,0:1:3.01:53,3,0	1/1:2,0:2:3.01:50,3,0	1/1:2,0:2:5.99:49,6,0	1/1:2,0:2:2.99:24,3,0	./.	0/0:2,0:2:6.02:0,6,154	1/1:2,0:2:2.99:24,3,0	1/1:7,2:8:6.02:95,6,0	1/1:2,7:9:15.05:261,15,0	0/0:5,0:4:5.39:0,5,46	1/1:3,0:3:0.47:1,0,0	./.	./.	./.	0/1:1,0:1:0:0,0,0	./.	./.	0/0:4,0:4:8.79:0,9,52	1/1:1,0:1:2.99:23,3,0
chr10	31935193	.	G	GTATA	1106.38	PASS	AB=1.000;AC=17;AF=0.472;AN=36;BaseQRankSum=-2.005;DP=80;FS=5.007;HRun=0;HaplotypeScore=28.5532;InbreedingCoeff=0.5536;MQ=62.42;MQ0=0;MQRankSum=-0.295;QD=26.98;ReadPosRankSum=-2.536;VQSLOD=2.1605;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,0:2:2.99:23,3,0	./.	0/0:1,0:1:3:0,3,28	./.	0/0:5,0:5:15.05:0,15,256	./.	0/0:3,0:3:9.03:0,9,156	1/1:1,13:16:40.94:727,41,0	0/0:2,0:2:3.01:0,3,52	0/0:1,0:1:0.89:0,1,2	0/0:2,0:2:0.47:0,0,1	1/1:2,0:2:3:25,3,0	0/1:2,0:2:0:0,0,0	./.	0/0:4,0:4:9.02:0,9,129	1/1:3,0:3:3:25,3,0	0/0:8,0:8:3.41:0,3,13	0/0:8,0:8:8.66:0,9,25	1/1:4,0:4:8.77:133,9,0	1/1:3,0:3:6.02:99,6,0	./.	./.	./.	./.	./.	./.	1/1:8,0:8:17.99:180,18,0	1/1:1,0:1:2.98:22,3,0
chr10	31935907	.	C	CT	6920.42	PASS	AB=0.798;AC=30;AF=0.536;AN=56;BaseQRankSum=4.909;DP=583;FS=10.559;HRun=10;HaplotypeScore=131.2894;InbreedingCoeff=0.8106;MQ=70.25;MQ0=0;MQRankSum=1.204;QD=21.29;ReadPosRankSum=2.946;VQSLOD=3.9391;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,30:32:87.21:920,87,0	0/0:10,0:10:29.96:0,30,246	0/0:18,0:18:19.03:0,19,233	0/1:12,1:11:29.95:30,0,58	0/0:34,0:34:86.84:0,87,707	0/0:25,0:25:65.92:0,66,542	0/0:19,1:20:20.94:0,21,362	0/0:7,0:24:32.10:0,32,94	0/0:20,0:20:53.92:0,54,440	1/1:6,27:33:81.14:831,81,0	1/1:4,18:23:50.88:501,51,0	1/1:2,19:21:42.11:448,42,0	1/1:6,8:14:35.40:338,35,0	1/1:5,10:15:5.45:263,5,0	0/0:24,0:24:62.92:0,63,517	1/1:1,11:12:27.07:288,27,0	1/1:3,24:27:63.16:669,63,0	1/1:2,6:8:12.03:128,12,0	0/0:5,0:21:30.54:0,31,89	0/0:2,0:22:36.10:0,36,102	0/0:3,0:18:25.33:0,25,74	1/1:5,16:21:1.90:428,2,0	1/1:5,19:24:27.89:431,28,0	1/1:4,15:19:9.93:325,10,0	1/1:5,25:30:42.20:643,42,0	1/1:8,21:29:41.37:622,41,0	0/0:1,0:22:22.08:0,22,82	0/1:2,2:4:7.36:55,0,7
chr10	31936476	.	C	CTG	8768.28	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-15.373;DP=751;FS=0.323;HRun=0;HaplotypeScore=85.2614;InbreedingCoeff=0.9999;MQ=88.27;MQ0=0;MQRankSum=-2.113;QD=51.58;ReadPosRankSum=-2.565;VQSLOD=4.4832;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,129,1975	0/0:15,0:15:42.12:0,42,596	0/0:33,0:33:93.30:0,93,1328	0/0:36,0:36:66.46:0,66,1159	0/0:25,0:25:72.24:0,72,1092	0/0:20,0:20:57.13:0,57,845	0/0:17,0:17:51.09:0,51,732	1/1:4,37:42:99:2177,123,0	0/0:23,0:23:69.23:0,69,1057	0/0:31,0:31:90.31:0,90,1378	0/0:26,0:26:78.26:0,78,1194	0/0:32,0:32:90.31:0,90,1376	0/0:23,0:23:69.23:0,69,1056	0/0:21,0:21:63.20:0,63,940	0/0:27,0:27:81.28:0,81,1239	0/0:30,0:30:87.30:0,87,1330	0/0:38,0:38:99:0,111,1698	0/0:12,0:12:36.12:0,36,545	1/1:2,13:15:42.14:810,42,0	1/1:3,26:30:69.24:1321,69,0	1/1:0,44:44:99:2318,120,0	0/0:23,0:23:66.18:0,66,984	0/0:23,0:23:69.23:0,69,1056	0/0:28,0:28:84.29:0,84,1285	0/0:15,0:15:45.15:0,45,689	0/0:25,0:25:75.25:0,75,1129	1/1:0,38:38:99:2143,111,0	0/0:13,0:13:39.13:0,39,596
chr10	31937084	.	GGAGA	G	58.09	PASS	AB=1.000;AC=11;AF=0.250;AN=44;BaseQRankSum=-0.267;DP=422;FS=6.009;HRun=0;HaplotypeScore=94.7225;InbreedingCoeff=0.1954;MQ=66.35;MQ0=46;MQRankSum=0.292;QD=0.54;ReadPosRankSum=-1.384;VQSLOD=1.0156;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:21:4.73:0,5,36	./.	./.	./.	1/1:17,0:17:5.17:21,5,0	1/1:9,5:12:6.02:92,6,0	1/1:10,1:9:3:27,3,0	0/0:25,0:22:2.97:0,3,20	0/0:7,0:9:0:0,0,0	0/0:19,0:18:7.57:0,8,63	0/0:11,0:10:5.89:0,6,64	0/0:14,0:14:8.23:0,8,79	0/1:11,0:11:0:0,0,0	0/1:16,0:11:14.93:15,0,57	0/0:15,0:14:6:0,6,94	0/1:11,0:11:2.65:3,0,12	0/1:16,0:11:13.25:13,0,43	0/0:17,0:13:2.99:0,3,23	0/0:8,0:8:6.02:0,6,94	0/1:12,0:12:2.10:2,0,76	./.	0/0:12,0:11:4.61:0,5,18	0/0:19,0:18:8.98:0,9,86	./.	./.	0/0:13,0:12:3.78:0,4,113	0/0:14,0:14:9.50:0,9,127	0/0:15,0:6:3.01:0,3,35
chr10	31937126	.	AG	A	328.54	PASS	AB=0.886;AC=9;AF=0.161;AN=56;BaseQRankSum=2.488;DP=497;FS=1.555;HRun=1;HaplotypeScore=111.1725;InbreedingCoeff=-0.0111;MQ=42.90;MQ0=48;MQRankSum=-3.654;QD=2.69;ReadPosRankSum=-1.000;VQSLOD=-0.6591;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:19:13.91:0,14,201	0/0:7,0:6:15.05:0,15,189	0/0:13,0:1:3.01:0,3,37	0/0:27,0:1:3:0,3,29	0/0:21,0:22:35.72:0,36,428	0/0:33,0:32:63.72:0,64,720	0/0:15,0:15:26.96:0,27,304	0/1:23,7:26:99:184,0,395	0/0:21,0:20:39.11:0,39,477	0/0:20,0:19:44.23:0,44,428	0/0:16,0:16:30.82:0,31,272	0/1:10,0:10:5.74:6,0,148	0/0:7,0:7:11.60:0,12,108	0/1:19,1:15:6.15:6,0,189	0/0:14,0:13:33.09:0,33,412	0/1:14,0:14:0.74:1,0,140	0/0:26,1:21:23.82:0,24,375	0/0:20,0:16:14.58:0,15,143	0/1:12,2:8:58.07:58,0,170	0/1:9,4:13:99:101,0,148	1/1:8,1:6:3.01:41,3,0	0/0:19,0:17:9.77:0,10,195	0/0:22,0:21:30.44:0,30,214	0/0:9,0:9:7.55:0,8,67	0/0:24,0:22:28.19:0,28,216	0/0:21,0:19:47.39:0,47,459	0/1:9,3:10:56.91:57,0,196	0/0:15,0:7:17.55:0,18,161
chr10	31937132	.	AG	A	3084.24	PASS	AB=0.871;AC=17;AF=0.304;AN=56;BaseQRankSum=3.044;DP=525;FS=85.350;HRun=1;HaplotypeScore=109.8737;InbreedingCoeff=-0.2342;MQ=47.94;MQ0=41;MQRankSum=1.745;QD=11.09;ReadPosRankSum=6.073;VQSLOD=-0.0545;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:20,1:20:66.30:223,0,66	0/0:9,0:8:21.04:0,21,248	0/0:27,0:8:14.51:0,15,165	0/0:42,0:5:8.98:0,9,103	0/1:20,2:22:24.51:25,0,341	0/0:30,0:30:57.49:0,57,662	0/0:17,0:16:9.29:0,9,305	0/0:35,0:31:65.62:0,66,691	0/0:19,0:19:39.12:0,39,491	0/1:13,5:19:99:363,0,101	0/1:14,2:16:52.45:259,0,52	0/1:8,1:9:81.26:81,0,109	0/1:5,2:7:38.80:54,0,39	0/1:18,1:14:62.12:250,0,62	0/0:13,0:13:33.11:0,33,426	0/1:12,2:14:50.11:219,0,50	0/1:26,2:24:87.13:384,0,87	0/1:20,0:16:9.15:9,0,109	0/0:17,0:12:25.36:0,25,309	0/0:13,0:13:23.56:0,24,285	0/0:11,0:8:1.25:0,1,3	0/1:11,8:18:36.57:306,0,37	0/1:16,5:20:90.30:249,0,90	0/1:8,1:9:2.94:90,0,3	1/1:21,2:22:19.75:297,20,0	0/1:15,3:17:99:353,0,158	0/0:13,0:11:17.96:0,18,201	0/1:10,3:7:84.55:85,0,102
chr10	31937137	.	GA	G	5024.94	PASS	AB=0.864;AC=33;AF=0.589;AN=56;BaseQRankSum=7.749;DP=562;FS=13.746;HRun=2;HaplotypeScore=112.8166;InbreedingCoeff=0.4026;MQ=51.98;MQ0=34;MQRankSum=-0.099;QD=14.04;ReadPosRankSum=3.063;VQSLOD=3.2142;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:19,5:23:41.24:500,41,0	0/0:9,0:8:21.07:0,21,273	0/0:39,0:13:27.20:0,27,323	0/0:50,1:12:26.37:0,26,275	0/0:21,0:21:27.04:0,27,393	0/0:31,1:31:67.06:0,67,789	0/0:17,1:17:14.91:0,15,414	0/1:39,0:35:99:109,0,187	0/0:21,0:21:45.08:0,45,573	0/1:15,6:21:5.48:450,0,5	0/1:14,4:18:16.78:285,0,17	1/1:8,1:9:6.44:182,6,0	1/1:5,2:7:0.63:56,1,0	1/1:16,1:14:31.68:315,32,0	0/0:12,0:12:33.11:0,33,429	1/1:11,4:15:12.30:363,12,0	1/1:22,4:23:24.85:556,25,0	0/1:17,1:16:19.63:20,0,66	0/1:17,2:14:50.30:50,0,53	1/1:11,3:14:18.43:99,18,0	1/1:7,4:8:2.50:9,2,0	1/1:10,10:19:45.12:511,45,0	1/1:16,5:21:38.54:388,39,0	1/1:7,2:9:12.03:138,12,0	1/1:20,4:24:28.20:387,28,0	0/1:15,5:19:86.11:415,0,86	1/1:11,3:12:3.60:41,4,0	0/1:9,3:9:72.50:152,0,73
chr10	31937138	.	AAGAG	A	1899.56	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=0.510;DP=570;FS=20.693;HRun=0;HaplotypeScore=146.8501;InbreedingCoeff=0.6956;MQ=55.14;MQ0=33;MQRankSum=-5.543;QD=16.81;ReadPosRankSum=-2.642;VQSLOD=1.5008;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:22:0.78:0,1,20	0/0:9,0:8:21.07:0,21,483	0/0:40,0:14:29.89:0,30,518	0/0:56,0:16:16.28:0,16,615	0/0:21,0:21:36.12:0,36,816	0/0:30,0:30:68.53:0,69,1456	0/0:18,0:17:36.12:0,36,857	1/1:13,26:35:66.18:1036,66,0	0/0:21,0:21:45.15:0,45,1055	0/0:21,0:21:29.93:0,30,135	0/0:18,0:18:17.26:0,17,57	0/0:9,0:10:11.44:0,11,65	0/0:8,0:8:10.21:0,10,93	0/1:16,0:14:1.56:2,0,47	0/0:12,0:12:32.90:0,33,797	0/0:16,0:16:8.81:0,9,64	0/0:26,0:24:0.93:0,1,78	0/0:7,0:18:5.81:0,6,34	1/1:9,8:14:19.06:409,19,0	1/1:5,6:13:23.96:341,24,0	1/1:7,3:8:3.01:52,3,0	0/0:20,0:19:18.10:0,18,52	0/0:20,0:20:14.99:0,15,48	0/0:9,0:9:1.97:0,2,6	0/0:25,0:25:20.02:0,20,94	0/0:20,0:19:26.16:0,26,105	1/1:5,8:12:14.37:219,14,0	0/0:11,0:9:7.62:0,8,52
chr10	31938908	.	TCA	T	3454.72	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=2.725;DP=544;FS=2.062;HRun=0;HaplotypeScore=110.1776;InbreedingCoeff=0.9980;MQ=74.85;MQ0=0;MQRankSum=-3.685;QD=36.75;ReadPosRankSum=-3.327;VQSLOD=4.7907;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,102,1863	0/0:11,0:11:33.11:0,33,618	0/0:21,0:21:60.20:0,60,1038	0/0:17,0:17:45.10:0,45,753	0/0:25,0:25:72.23:0,72,1302	0/0:23,0:23:60.19:0,60,1092	0/0:26,0:26:75.26:0,75,1405	1/1:4,22:26:66.18:915,66,0	0/0:8,0:8:24.08:0,24,449	0/0:23,0:23:69.23:0,69,1252	0/0:20,0:20:60.21:0,60,1107	0/0:31,0:31:84.29:0,84,1572	0/0:22,0:22:63.22:0,63,1169	0/0:19,0:19:54.19:0,54,1010	0/0:24,0:24:63.22:0,63,1180	0/0:19,0:19:54.17:0,54,969	0/0:16,0:16:48.16:0,48,899	0/0:8,0:8:21.07:0,21,393	1/1:1,15:16:45.15:663,45,0	1/1:4,17:21:57.19:832,57,0	1/1:0,13:13:27.09:397,27,0	0/0:15,0:15:42.14:0,42,778	0/0:9,0:9:27.09:0,27,506	0/0:13,0:13:39.13:0,39,731	0/0:32,0:32:93.32:0,93,1741	0/0:22,0:22:63.22:0,63,1169	1/1:6,12:18:45.15:648,45,0	0/0:12,0:12:36.12:0,36,674
chr10	31938971	.	AT	A	11593.42	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=14.983;DP=532;FS=1.187;HRun=5;HaplotypeScore=85.9085;InbreedingCoeff=0.9992;MQ=89.41;MQ0=0;MQRankSum=-4.301;QD=30.67;ReadPosRankSum=4.784;VQSLOD=5.1789;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,33:35:96.27:1089,96,0	0/0:14,0:14:39.13:0,39,533	0/0:22,0:22:60.16:0,60,781	0/0:19,0:19:48.15:0,48,636	0/0:16,0:16:45.15:0,45,616	0/0:19,0:19:57.19:0,57,780	0/0:26,0:26:72.22:0,72,968	1/1:1,22:23:63.18:715,63,0	0/0:18,0:18:51.15:0,51,676	1/1:0,23:23:66.19:749,66,0	1/1:1,19:20:57.16:647,57,0	1/1:2,19:21:51.14:579,51,0	1/1:2,20:22:57.16:646,57,0	1/1:0,22:22:60.17:681,60,0	0/0:20,0:20:60.19:0,60,805	1/1:2,22:24:60.17:681,60,0	1/1:2,16:18:48.14:545,48,0	1/1:0,11:11:30.09:340,30,0	1/1:1,12:13:33.08:364,33,0	1/1:1,17:18:42.12:476,42,0	1/1:3,13:16:33.09:374,33,0	1/1:0,10:10:27.08:306,27,0	1/1:0,10:10:30.09:340,30,0	1/1:0,12:12:36.10:408,36,0	1/1:0,21:21:60.17:681,60,0	1/1:0,29:29:87.25:987,87,0	1/1:1,21:22:63.18:714,63,0	1/1:0,8:8:24.07:272,24,0
chr10	31939846	.	A	ATGTGTG	7720.94	PASS	AB=0.693;AC=35;AF=0.625;AN=56;BaseQRankSum=-7.645;DP=654;FS=0.000;HRun=0;HaplotypeScore=159.8174;InbreedingCoeff=0.6924;MQ=62.54;MQ0=3;MQRankSum=-6.603;QD=17.12;ReadPosRankSum=-4.952;VQSLOD=3.0368;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:18,5:27:8.77:261,9,0	0/0:3,0:7:9.03:0,9,126	0/0:24,0:19:3.01:0,3,42	0/0:15,0:13:9.03:0,9,163	0/0:16,0:39:56:0,56,759	0/0:12,0:37:51.17:0,51,713	0/0:3,0:12:18.32:0,18,284	0/1:26,0:36:9.27:64,0,9	0/0:6,0:15:18.06:0,18,246	1/1:13,8:24:42.06:863,42,0	1/1:19,7:29:8.92:290,9,0	1/1:16,11:34:33.11:925,33,0	1/1:11,15:28:24.05:768,24,0	1/1:9,7:16:17.73:572,18,0	0/0:18,0:19:30.10:0,30,607	1/1:11,7:20:15.05:488,15,0	1/1:19,5:23:21.07:525,21,0	1/1:8,0:11:2.22:51,2,0	1/1:16,0:23:5.90:98,6,0	0/1:12,0:28:2.45:18,0,2	0/1:14,0:28:4.12:10,0,4	1/1:12,5:23:18.06:484,18,0	1/1:10,7:19:7.60:199,8,0	1/1:7,8:17:12.01:272,12,0	1/1:5,6:13:9.03:292,9,0	1/1:24,7:34:51.53:1051,52,0	0/0:13,0:34:18.48:0,18,133	1/1:3,9:14:15.05:488,15,0
chr10	31940488	.	T	TTGTG	7154.28	PASS	AB=0.827;AC=33;AF=0.589;AN=56;BaseQRankSum=-2.973;DP=838;FS=0.000;HRun=0;HaplotypeScore=177.5456;InbreedingCoeff=0.4396;MQ=52.86;MQ0=24;MQRankSum=0.131;QD=11.98;ReadPosRankSum=-2.928;VQSLOD=4.0390;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:29,5:38:7.36:550,0,7	0/0:7,0:9:12:0,12,162	0/0:54,0:26:14.77:0,15,189	0/1:71,0:31:26.50:26,0,66	0/0:19,0:20:12.04:0,12,190	0/0:29,0:30:26.18:0,26,477	0/0:24,0:25:16.97:0,17,474	0/1:31,0:31:5.44:17,0,5	0/0:33,0:35:50.22:0,50,677	1/1:20,6:33:0.28:583,0,0	0/1:9,5:17:28.41:184,0,28	1/1:18,12:33:31.94:552,32,0	1/1:16,8:25:23.75:468,24,0	1/1:15,12:30:17.71:308,18,0	0/0:39,0:45:56.17:0,56,625	1/1:10,16:30:43.88:861,44,0	1/1:9,12:19:36.12:837,36,0	1/1:14,6:20:5.75:83,6,0	0/1:18,0:19:4.54:5,0,97	1/1:20,0:26:3.22:31,3,0	1/1:29,0:28:0.89:2,1,0	1/1:9,17:32:22.25:402,22,0	1/1:11,9:24:11.51:167,12,0	0/1:7,20:33:2.21:914,0,2	0/1:13,6:23:9.62:177,0,10	1/1:26,9:36:35.91:670,36,0	0/0:15,0:20:6.42:0,6,80	1/1:3,6:14:17.73:317,18,0
chr10	31940598	.	G	GTA	766.99	PASS	AB=0.896;AC=11;AF=0.196;AN=56;BaseQRankSum=10.635;DP=816;FS=80.704;HRun=0;HaplotypeScore=304.4020;InbreedingCoeff=-0.2492;MQ=38.15;MQ0=112;MQRankSum=-9.537;QD=2.91;ReadPosRankSum=2.327;VQSLOD=-0.7338;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:21:12.22:0,12,381	0/1:14,1:15:36.37:36,0,369	0/0:54,0:1:3.01:0,3,36	0/0:57,0:1:3.01:0,3,46	0/0:31,3:34:47.32:0,47,734	0/0:25,1:26:37.73:0,38,511	0/0:30,0:26:48.07:0,48,684	0/1:28,0:10:97.81:110,0,98	0/0:37,0:37:69.96:0,70,992	0/1:28,7:34:99:232,0,779	0/1:22,4:25:0.25:0,0,248	0/0:29,6:32:50.44:0,50,711	0/0:36,4:40:26.51:0,27,890	0/0:27,0:26:25.31:0,25,371	0/0:50,2:52:79.41:0,79,1226	0/1:30,3:32:56.63:57,0,379	0/0:23,0:23:27.81:0,28,536	0/0:13,0:12:25.29:0,25,374	0/1:25,0:11:99:138,0,246	0/1:15,7:22:48.82:49,0,377	0/0:26,0:24:36.04:0,36,504	0/1:22,4:25:23.44:23,0,384	0/0:31,8:38:58.32:0,58,820	0/0:17,0:16:24.18:0,24,341	0/0:14,4:17:27.46:0,27,389	0/1:18,7:23:99:203,0,528	0/1:22,3:23:47.92:48,0,387	0/1:4,0:4:10.88:11,0,63
chr10	31940623	.	A	AG	115.86	PASS	AB=0.915;AC=9;AF=0.161;AN=56;BaseQRankSum=3.946;DP=771;FS=23.155;HRun=0;HaplotypeScore=334.8110;InbreedingCoeff=-0.1879;MQ=34.88;MQ0=82;MQRankSum=-5.464;QD=0.57;ReadPosRankSum=-5.497;VQSLOD=0.3789;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:17,2:19:27.14:0,27,416	0/0:16,0:16:30.10:0,30,409	0/0:57,0:5:12.03:0,12,153	0/0:55,0:6:15.04:0,15,188	0/0:35,1:35:55.78:0,56,733	0/1:20,1:22:6.54:7,0,434	0/0:35,0:32:53.73:0,54,739	0/0:21,0:14:27.08:0,27,338	0/0:38,0:38:75.91:0,76,993	0/0:41,0:39:99:0,105,1359	0/0:19,0:19:26.38:0,26,317	0/0:37,1:37:6.67:0,7,525	0/0:35,3:38:70.22:0,70,908	0/1:27,1:27:47.40:47,0,422	0/1:46,3:48:11.33:11,0,901	0/1:29,1:30:59.96:60,0,451	0/1:19,0:18:59.86:60,0,383	0/1:12,1:12:16.03:16,0,282	0/0:11,0:7:20.10:0,20,262	0/0:23,0:23:13.52:0,14,184	0/0:18,0:18:26.97:0,27,377	0/1:23,3:25:12.65:13,0,273	0/0:25,0:25:31.87:0,32,425	0/1:11,2:12:31.32:31,0,115	0/0:17,0:15:21.87:0,22,285	0/0:34,0:33:95.02:0,95,1205	0/0:19,0:17:2.99:0,3,482	0/1:2,1:3:0.25:0,0,62
chr10	31940635	.	G	GTA	2268.63	PASS	AB=0.880;AC=16;AF=0.286;AN=56;BaseQRankSum=13.078;DP=775;FS=151.057;HRun=0;HaplotypeScore=344.3440;InbreedingCoeff=-0.4247;MQ=35.93;MQ0=70;MQRankSum=-10.772;QD=5.55;ReadPosRankSum=-4.403;VQSLOD=-0.4251;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:18,1:19:7.57:8,0,392	0/1:13,0:13:23.69:24,0,297	0/0:56,0:12:18.62:0,19,319	0/0:50,0:8:2.39:0,2,237	0/0:35,2:36:44.15:0,44,661	0/0:21,1:22:27.59:0,28,455	0/0:26,0:22:33.55:0,34,554	0/1:32,1:20:99:132,0,406	0/1:38,1:39:5.02:5,0,890	0/1:36,8:42:99:415,0,971	0/1:17,3:20:99:108,0,239	0/1:35,4:39:99:148,0,434	0/1:36,3:39:99:209,0,763	0/0:21,7:27:32.79:0,33,506	0/0:47,4:50:1.06:0,1,972	0/1:24,6:30:99:336,0,351	0/0:17,1:17:12.47:0,12,454	0/1:10,1:11:40.47:40,0,299	0/0:14,1:10:4.72:0,5,309	0/1:18,5:23:99:105,0,156	0/0:21,0:21:26.35:0,26,412	0/1:23,2:24:39.87:40,0,253	0/0:25,2:27:34.35:0,34,467	0/0:12,1:13:9.94:0,10,141	0/1:16,1:15:27.14:27,0,254	0/1:29,6:34:99:595,0,659	0/1:12,7:17:99:146,0,361	0/1:1,2:3:14.19:85,0,14
chr10	31940653	.	TG	T	1410.34	PASS	AB=0.726;AC=6;AF=0.107;AN=56;BaseQRankSum=0.784;DP=786;FS=0.000;HRun=1;HaplotypeScore=323.9114;InbreedingCoeff=0.2342;MQ=35.50;MQ0=43;MQRankSum=-0.137;QD=11.02;ReadPosRankSum=-2.218;VQSLOD=1.0655;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:40.64:0,41,598	0/0:11,0:11:21.47:0,21,307	0/0:61,0:13:36.59:0,37,536	0/0:43,1:8:21.07:0,21,334	0/0:37,0:36:40.57:0,41,587	0/0:22,0:22:23.72:0,24,316	0/0:31,0:27:33.40:0,33,465	0/1:28,14:25:99:467,0,101	0/0:41,0:41:69.03:0,69,1046	0/0:44,0:44:99:0,123,1731	0/0:18,0:17:22.77:0,23,296	0/0:37,0:36:62.07:0,62,939	0/0:37,0:37:90.17:0,90,1286	0/0:30,0:29:39.56:0,40,625	0/0:47,0:47:70.74:0,71,1033	0/0:28,0:28:43.91:0,44,618	0/0:18,0:17:37.94:0,38,561	0/0:11,0:11:26.98:0,27,380	0/1:11,8:14:99:279,0,106	0/1:15,8:23:25.38:143,0,25	1/1:3,18:21:26.95:350,27,0	0/0:26,0:25:28.14:0,28,427	0/0:23,0:23:34.08:0,34,501	0/0:15,0:14:9.64:0,10,148	0/0:14,0:13:23.87:0,24,342	0/0:33,0:32:73.28:0,73,1270	0/1:12,9:19:99:302,0,166	0/0:4,0:4:8.39:0,8,111
chr10	31940659	.	TA	T	1819.84	PASS	AB=0.853;AC=26;AF=0.464;AN=56;BaseQRankSum=12.571;DP=743;FS=131.729;HRun=1;HaplotypeScore=298.6602;InbreedingCoeff=-0.7805;MQ=35.97;MQ0=24;MQRankSum=-11.118;QD=2.67;ReadPosRankSum=-3.194;VQSLOD=-0.5847;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:18,5:23:91.39:91,0,431	0/1:7,4:11:25.38:25,0,264	0/1:52,3:13:43.32:43,0,383	0/0:38,2:8:21.07:0,21,302	0/1:24,8:34:0.40:0,0,538	0/1:19,2:21:30.18:30,0,260	0/1:24,5:27:28.09:28,0,353	0/1:35,5:24:17.70:18,0,549	0/1:34,3:37:1.45:1,0,812	0/1:32,10:42:99:284,0,1015	0/1:14,5:18:53.35:53,0,214	0/1:29,8:36:99:205,0,613	0/1:31,4:35:99:351,0,862	0/1:26,2:27:18.92:19,0,579	0/1:45,2:47:3.16:3,0,932	0/1:24,4:28:99:105,0,478	0/1:16,0:16:29.70:30,0,489	0/1:7,1:9:6.34:6,0,268	0/1:19,2:15:18.57:19,0,345	0/1:11,11:22:60.11:60,0,174	0/0:21,0:21:27.56:0,28,406	0/1:17,6:23:75.25:75,0,295	0/1:17,7:24:99:157,0,333	0/1:12,3:14:35.77:36,0,118	0/1:12,1:13:26.04:26,0,264	0/1:22,7:29:99:227,0,688	0/1:16,4:18:38.14:38,0,404	0/1:2,1:3:37.43:37,0,46
chr10	31940660	.	A	ATG	415.43	PASS	AB=0.870;AC=6;AF=0.107;AN=56;BaseQRankSum=10.943;DP=715;FS=71.247;HRun=0;HaplotypeScore=290.1685;InbreedingCoeff=-0.1575;MQ=36.24;MQ0=23;MQRankSum=-8.874;QD=2.53;ReadPosRankSum=-0.953;VQSLOD=-0.6886;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,2:22:17.08:0,17,451	0/0:11,0:11:15.30:0,15,294	0/0:54,0:13:37.71:0,38,450	0/0:36,0:8:20.90:0,21,283	0/0:32,2:35:35.54:0,36,563	0/0:15,5:21:1.13:0,1,264	0/0:25,3:27:24.39:0,24,382	0/1:22,13:24:99:282,0,596	0/0:32,3:37:9.78:0,10,801	0/0:39,0:39:2.57:0,3,1043	0/0:16,0:15:9.93:0,10,236	0/0:30,3:35:46.73:0,47,695	0/0:32,1:34:21.48:0,21,892	0/0:19,3:25:38.91:0,39,633	0/1:34,9:45:8.08:8,0,941	0/0:19,1:23:4.72:0,5,501	0/0:16,0:16:21.31:0,21,513	0/1:8,0:9:56.99:57,0,258	0/1:16,3:15:96.39:96,0,378	0/1:20,1:21:26.85:27,0,188	0/0:18,2:21:26.95:0,27,435	0/0:19,2:22:19.71:0,20,338	0/0:23,0:23:22.04:0,22,373	0/0:11,3:13:7.65:0,8,116	0/0:12,0:12:16.50:0,16,288	0/1:27,0:28:65.06:65,0,706	0/0:15,1:16:14.32:0,14,366	0/0:1,1:2:5.22:0,5,33
chr10	31943997	.	CATGACAAGGTAGTTAGTTATGACAAGGTAGTTAGTT	C	8470.38	PASS	AB=1.000;AC=32;AF=0.593;AN=54;BaseQRankSum=3.766;DP=617;FS=4.935;HRun=0;HaplotypeScore=520.7406;InbreedingCoeff=0.6145;MQ=58.29;MQ0=3;MQRankSum=4.109;QD=23.27;ReadPosRankSum=-7.737;VQSLOD=-0.2335;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:18:15.05:361,15,0	0/0:18,0:18:32.85:0,33,1369	./.	0/0:13,0:4:2.04:0,2,6	0/0:23,0:23:39.12:0,39,1685	0/0:36,0:36:66.23:0,66,2573	0/0:24,0:24:39.11:0,39,940	0/0:30,0:28:20.98:0,21,179	0/0:37,0:37:81.28:0,81,3168	1/1:13,32:45:92.86:1371,93,0	1/1:16,0:16:15.05:380,15,0	1/1:18,0:18:15.05:359,15,0	1/1:21,0:21:15.52:394,16,0	1/1:30,0:29:42.14:1083,42,0	0/0:38,0:38:72.22:0,72,2953	0/1:22,0:22:41.85:741,0,42	1/1:16,0:15:27.06:577,27,0	1/1:8,0:8:12.04:329,12,0	0/0:17,0:14:3.01:0,3,41	0/1:26,0:26:84.38:84,0,745	0/1:30,0:30:12.38:12,0,961	1/1:22,0:22:21.71:636,22,0	1/1:17,0:17:18.06:485,18,0	1/1:14,0:14:20.90:503,21,0	1/1:18,0:18:18.06:459,18,0	1/1:14,0:14:15.04:384,15,0	0/1:22,0:22:94.26:94,0,356	1/1:7,0:7:9.03:218,9,0
chr10	31944184	.	AGGTG	A	369.65	PASS	AB=0.966;AC=9;AF=0.161;AN=56;BaseQRankSum=8.520;DP=547;FS=28.224;HRun=0;HaplotypeScore=102.5897;InbreedingCoeff=-0.0124;MQ=63.99;MQ0=15;MQRankSum=-1.222;QD=2.91;ReadPosRankSum=1.886;VQSLOD=0.1411;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:8.61:0,9,318	0/0:4,0:4:12:0,12,106	0/0:31,0:25:68.32:0,68,751	0/0:27,0:21:39.30:0,39,465	0/0:15,0:15:32.82:0,33,284	0/0:23,0:22:26.24:0,26,337	0/0:19,0:18:50.19:0,50,557	0/0:29,0:27:79.70:0,80,704	0/0:24,0:24:47.98:0,48,557	0/0:20,0:20:47.55:0,48,414	0/0:21,0:20:22.17:0,22,334	0/0:16,0:16:7.27:0,7,267	0/1:16,1:17:63.93:64,0,225	0/1:17,1:18:99:117,0,207	0/0:20,0:20:44.98:0,45,535	0/1:13,0:13:8.99:9,0,182	0/1:28,0:28:66.32:66,0,405	0/0:16,0:16:8.57:0,9,244	0/0:15,0:13:37.16:0,37,310	0/0:27,0:25:68.99:0,69,688	0/0:29,0:26:59.55:0,60,690	0/1:18,1:17:99:141,0,172	0/0:15,2:17:34.04:0,34,287	0/1:17,0:16:7.23:7,0,175	0/1:11,1:12:76.40:76,0,164	0/0:21,0:21:12.15:0,12,406	0/0:22,0:22:55.03:0,55,575	1/1:3,0:3:2.99:23,3,0
chr10	31944185	.	GGTGT	G	1444.10	PASS	AB=0.863;AC=25;AF=0.481;AN=52;BaseQRankSum=-1.862;DP=568;FS=12.655;HRun=0;HaplotypeScore=106.1455;InbreedingCoeff=0.3685;MQ=62.55;MQ0=16;MQRankSum=0.686;QD=5.49;ReadPosRankSum=2.920;VQSLOD=1.4603;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:21,3:24:13.97:84,0,14	0/0:4,0:4:3.01:0,3,53	./.	./.	0/0:17,0:17:2.61:0,3,52	0/0:24,0:31:3.01:0,3,53	0/0:22,0:21:12.04:0,12,212	0/0:30,0:28:8.24:0,8,66	0/0:28,0:28:23.89:0,24,406	0/1:21,0:21:18:18,0,24	0/1:15,6:20:18.98:55,0,19	1/1:14,0:16:6:56,6,0	1/1:15,3:18:9.03:139,9,0	1/1:15,2:17:12.04:184,12,0	0/0:25,0:25:15.05:0,15,256	1/1:9,4:13:6.02:93,6,0	0/1:21,7:28:29.56:254,0,30	0/1:14,3:17:37.33:37,0,81	0/0:14,0:12:3.01:0,3,52	0/0:22,0:23:9.01:0,9,128	0/0:31,0:27:21.05:0,21,322	1/1:13,5:16:17.72:268,18,0	1/1:17,0:17:3:28,3,0	1/1:16,1:16:11.73:99,12,0	1/1:10,2:12:12.51:169,13,0	1/1:19,2:21:6.49:91,6,0	0/0:20,0:21:16.28:0,16,230	1/1:0,3:3:3.01:46,3,0
chr10	31945136	.	AGTGTGTGT	A	1890.74	PASS	AB=0.733;AC=26;AF=0.520;AN=50;BaseQRankSum=0.515;DP=438;FS=0.000;HRun=0;HaplotypeScore=136.6538;InbreedingCoeff=0.5084;MQ=53.70;MQ0=9;MQRankSum=-2.708;QD=8.26;ReadPosRankSum=-0.022;VQSLOD=2.2677;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:16,10:26:0.27:0,0,0	0/0:2,0:3:5.99:0,6,49	0/0:15,0:11:6.02:0,6,87	0/0:19,0:16:9.02:0,9,102	0/0:14,0:20:5.97:0,6,67	0/0:6,0:13:6:0,6,67	0/0:8,0:13:9.01:0,9,102	0/0:19,0:17:2.68:0,3,11	0/0:3,0:13:14.90:0,15,116	1/1:12,6:18:6.02:85,6,0	1/1:10,4:15:3.01:57,3,0	1/1:3,6:9:3.01:75,3,0	1/1:9,2:12:15.05:284,15,0	1/1:5,8:14:6.02:133,6,0	0/0:7,0:14:6.02:0,6,195	1/1:10,3:13:6.01:100,6,0	1/1:15,3:19:6.02:131,6,0	0/1:15,5:20:45.97:141,0,46	1/1:18,0:21:11.90:223,12,0	1/1:5,0:9:3.01:56,3,0	0/0:11,0:17:2.78:0,3,34	1/1:5,0:8:1.82:5,2,0	./.	1/1:16,6:22:3.48:76,3,0	0/1:11,11:22:0:0,0,0	1/1:14,9:22:28.35:682,28,0	./.	./.
chr10	31945746	.	TTTTTTTC	T	926.64	PASS	AB=0.917;AC=9;AF=0.161;AN=56;BaseQRankSum=1.013;DP=407;FS=5.703;HRun=0;HaplotypeScore=98.9279;InbreedingCoeff=0.7809;MQ=62.70;MQ0=12;MQRankSum=0.613;QD=14.95;ReadPosRankSum=-3.489;VQSLOD=0.6426;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:53.69:0,54,803	0/0:3,0:3:6.02:0,6,209	0/0:34,0:9:14.64:0,15,183	0/0:31,0:11:8.93:0,9,286	0/0:20,0:19:44:0,44,1176	0/0:11,0:11:21.02:0,21,519	0/0:11,0:11:27.06:0,27,566	1/1:10,20:29:47.38:515,47,0	0/0:7,0:7:15:0,15,423	0/0:19,0:18:46.48:0,46,631	0/0:11,0:11:27.08:0,27,484	0/0:14,0:13:20.99:0,21,266	0/0:15,0:15:33.08:0,33,576	0/0:12,0:12:17.75:0,18,274	0/0:9,0:9:14.96:0,15,417	0/0:6,0:6:17.93:0,18,208	0/0:29,0:29:74.06:0,74,1053	0/0:16,0:16:36.02:0,36,580	1/1:14,0:14:25.49:289,25,0	1/1:2,0:1:3:27,3,0	1/1:5,0:5:4.20:22,4,0	0/0:8,0:8:20.74:0,21,243	0/0:6,0:5:11.75:0,12,210	0/0:12,0:12:27.05:0,27,417	0/0:15,0:15:32.88:0,33,486	0/0:23,0:23:57.10:0,57,858	0/1:10,1:11:0.98:222,0,1	0/0:8,0:8:21.01:0,21,278
chr10	31945753	.	CTT	C	2523.60	PASS	AB=0.864;AC=30;AF=0.556;AN=54;BaseQRankSum=-1.518;DP=412;FS=7.773;HRun=15;HaplotypeScore=59.8507;InbreedingCoeff=0.7522;MQ=57.98;MQ0=24;MQRankSum=2.710;QD=11.17;ReadPosRankSum=6.072;VQSLOD=1.9349;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,15:23:38.43:319,38,0	0/0:3,0:3:6.02:0,6,82	0/0:36,0:8:8.89:0,9,79	0/0:32,0:11:15.01:0,15,103	0/0:20,1:21:11.74:0,12,415	0/0:6,0:8:17.98:0,18,187	0/0:11,0:11:16.62:0,17,228	0/0:30,0:29:5.26:0,5,158	0/0:5,0:5:11.53:0,12,130	0/1:10,5:15:0.58:119,0,1	1/1:1,9:10:10.73:218,11,0	1/1:5,8:12:8.82:79,9,0	1/1:5,9:14:29.67:245,30,0	1/1:6,5:11:14.92:125,15,0	0/0:5,0:7:14.51:0,15,134	1/1:4,2:6:7.20:56,7,0	1/1:13,14:28:47.36:392,47,0	1/1:6,11:18:10.36:229,10,0	0/0:19,0:16:10.65:0,11,125	./.	0/0:4,0:6:2.97:0,3,20	1/1:2,7:9:11.96:105,12,0	1/1:2,5:6:8.98:79,9,0	1/1:8,5:11:20.53:168,21,0	1/1:3,8:12:20.65:170,21,0	1/1:7,15:23:40.84:334,41,0	0/1:12,0:12:5.75:6,0,95	1/1:6,4:8:8.92:79,9,0
chr10	31945767	.	TTC	T	787.31	PASS	AB=0.958;AC=24;AF=0.444;AN=54;BaseQRankSum=5.935;DP=374;FS=44.484;HRun=0;HaplotypeScore=61.0945;InbreedingCoeff=-0.1060;MQ=50.87;MQ0=27;MQRankSum=1.083;QD=3.14;ReadPosRankSum=5.500;VQSLOD=0.0140;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:20,1:20:0.03:75,0,0	0/0:2,0:2:6.02:0,6,84	0/0:31,0:4:6.86:0,7,48	0/0:29,0:8:2.60:0,3,55	0/0:22,0:21:11.66:0,12,425	0/0:12,0:12:23.23:0,23,191	0/1:9,0:9:7.73:8,0,228	0/1:23,0:22:12.18:12,0,72	0/0:9,0:8:20.78:0,21,186	0/1:9,1:9:10.25:47,0,10	0/1:11,0:11:25.52:32,0,26	0/1:11,1:11:13.06:28,0,13	1/1:13,3:15:2.27:125,2,0	1/1:6,3:9:14.61:109,15,0	0/0:12,0:12:17.46:0,17,118	1/1:3,0:3:3.94:30,4,0	0/1:19,3:22:36.76:119,0,37	0/1:21,1:19:45.47:45,0,107	0/1:13,0:10:32.33:32,0,48	./.	0/0:5,0:5:2.57:0,3,18	1/1:7,0:7:10.76:51,11,0	0/1:9,0:8:2.03:2,0,51	0/1:12,3:13:42.98:54,0,43	1/1:11,0:9:8.59:51,9,0	0/1:20,1:21:69.25:82,0,69	0/1:9,0:9:20.03:20,0,69	0/1:8,0:5:14.08:25,0,14
chr10	31946450	.	ATGATGGTGG	A	11027.50	PASS	AB=0.548;AC=29;AF=0.518;AN=56;BaseQRankSum=13.688;DP=691;FS=0.778;HRun=0;HaplotypeScore=182.0418;InbreedingCoeff=0.8914;MQ=52.50;MQ0=16;MQRankSum=-7.891;QD=29.10;ReadPosRankSum=5.915;VQSLOD=3.9755;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:6,28:33:0.01:352,0,0	0/0:9,0:9:27.09:0,27,1056	0/0:20,0:4:5.06:0,5,65	0/0:33,0:15:31.82:0,32,329	0/0:36,0:36:76.31:0,76,2863	0/0:19,0:19:57.07:0,57,1148	0/0:31,0:31:85.94:0,86,2361	0/0:16,0:14:42.11:0,42,579	0/0:30,0:30:84.23:0,84,2668	1/1:2,31:32:75.25:1415,75,0	1/1:1,35:36:36.04:974,36,0	1/1:0,22:23:39.13:1093,39,0	1/1:2,22:24:8.86:1251,9,0	1/1:2,26:28:23.91:597,24,0	0/0:23,0:23:69.15:0,69,2088	1/1:1,21:22:26.30:789,26,0	1/1:13,3:16:32.92:453,33,0	1/1:1,11:12:3.48:94,3,0	0/0:22,0:27:65.41:0,65,1177	0/0:17,0:17:17.07:0,17,433	0/0:41,0:39:95.96:0,96,1797	1/1:1,17:18:17.88:546,18,0	1/1:2,29:31:16.95:522,17,0	1/1:3,32:35:11.60:301,12,0	1/1:2,21:23:27.09:783,27,0	1/1:4,32:35:90.04:1583,90,0	0/0:10,0:10:9.02:0,9,250	1/1:0,8:8:9.03:277,9,0
chr10	31946453	.	A	ATGGTGG	1388.44	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-5.205;DP=680;FS=28.093;HRun=0;HaplotypeScore=189.4814;InbreedingCoeff=0.8262;MQ=52.34;MQ0=17;MQRankSum=2.635;QD=12.86;ReadPosRankSum=-3.255;VQSLOD=1.0128;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:30:14.33:0,14,168	0/0:9,0:9:24.05:0,24,420	0/0:23,0:7:2.13:0,2,62	0/0:33,0:16:14.94:0,15,209	0/0:35,0:35:63.20:0,63,1138	0/0:21,0:21:30.13:0,30,501	0/0:31,0:31:54.64:0,55,978	1/1:16,0:14:12.04:147,12,0	0/0:29,0:29:63.19:0,63,1155	0/0:32,0:31:40.98:0,41,520	0/0:35,0:35:25.33:0,25,331	0/0:22,0:23:23.11:0,23,293	0/0:23,0:23:43.39:0,43,584	0/0:28,0:28:11.66:0,12,160	0/0:24,0:24:45.13:0,45,798	0/0:21,0:21:19.04:0,19,223	0/0:15,0:15:23.97:0,24,381	0/0:12,0:12:6.02:0,6,73	1/1:25,0:25:24.02:385,24,0	1/1:8,8:17:18.05:241,18,0	1/1:39,0:37:33.06:610,33,0	0/0:17,0:17:18.06:0,18,241	0/0:31,0:31:14.89:0,15,199	0/0:34,0:34:2.68:0,3,42	0/0:21,0:21:21.07:0,21,284	0/0:35,0:34:49.98:0,50,696	1/1:1,8:11:6.02:170,6,0	0/0:8,0:8:9.03:0,9,125
chr10	31946631	.	C	CAA	3619.15	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=7.919;DP=536;FS=4.819;HRun=9;HaplotypeScore=73.3379;InbreedingCoeff=0.9877;MQ=70.78;MQ0=0;MQRankSum=-1.065;QD=34.14;ReadPosRankSum=-4.291;VQSLOD=2.8298;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:29.70:0,30,319	0/0:10,0:10:30.06:0,30,311	0/0:11,0:12:16.76:0,17,139	0/0:12,0:12:11.02:0,11,100	0/0:22,0:22:57.11:0,57,596	0/0:23,0:23:66.17:0,66,702	0/0:18,0:18:48.12:0,48,511	1/1:13,26:39:96.75:1423,97,0	0/0:21,0:21:57.14:0,57,607	0/0:22,0:23:59.86:0,60,611	0/0:22,0:22:66.17:0,66,702	0/0:11,0:11:30.07:0,30,319	0/0:18,0:18:48.10:0,48,511	0/0:19,0:19:51.12:0,51,543	0/0:14,0:14:33.06:0,33,351	0/0:25,0:25:69.14:0,69,724	0/0:26,0:26:72.18:0,72,766	0/0:22,0:22:57.12:0,57,606	1/1:7,9:16:29.85:392,30,0	1/1:7,6:14:36.08:518,36,0	1/1:2,15:17:39.13:600,39,0	0/0:14,0:14:30.07:0,30,319	0/0:21,0:21:60.13:0,60,631	0/0:14,0:14:42.11:0,42,447	0/0:24,0:24:66.15:0,66,702	0/0:36,0:36:96.22:0,96,1021	1/1:4,16:20:45.15:685,45,0	0/0:10,0:10:27.06:0,27,287
chr10	31946756	.	CTT	C	8857.24	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=4.690;DP=496;FS=11.718;HRun=11;HaplotypeScore=74.4968;InbreedingCoeff=0.9451;MQ=64.67;MQ0=2;MQRankSum=-3.358;QD=23.49;ReadPosRankSum=3.307;VQSLOD=3.3237;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,18:20:54.13:575,54,0	0/0:9,0:9:18.06:0,18,276	0/0:15,0:10:23.41:0,23,241	0/0:17,0:11:6.51:0,7,183	0/0:29,0:29:71.82:0,72,1050	0/0:21,0:22:58.05:0,58,804	0/0:6,0:6:15.05:0,15,231	1/1:8,18:25:57.06:592,57,0	0/0:11,0:11:27.09:0,27,386	1/1:1,21:22:63.12:651,63,0	1/1:6,31:38:92.28:945,92,0	1/1:3,13:16:36.08:383,36,0	1/1:4,12:17:27:343,27,0	1/1:2,12:14:24.05:255,24,0	0/0:10,0:10:24.06:0,24,329	1/1:2,14:15:33.08:351,33,0	1/1:2,25:27:63.11:659,63,0	1/1:4,18:21:42.08:447,42,0	1/1:6,7:14:20.34:203,20,0	1/1:8,17:25:60.10:628,60,0	1/1:2,1:3:3:32,3,0	1/1:0,8:8:21:211,21,0	1/1:1,24:25:63.26:698,63,0	1/1:0,10:10:24.06:255,24,0	1/1:7,20:27:45.06:479,45,0	1/1:1,12:14:38.81:385,39,0	1/1:4,20:23:57.10:605,57,0	1/1:0,9:9:15.04:159,15,0
chr10	31946773	.	CT	C	1373	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=5.249;DP=486;FS=6.276;HRun=10;HaplotypeScore=89.4901;InbreedingCoeff=0.8397;MQ=65.02;MQ0=2;MQRankSum=-7.931;QD=14.01;ReadPosRankSum=-1.406;VQSLOD=3.4265;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,2:25:23.05:0,23,698	0/0:6,0:6:15.04:0,15,166	0/0:18,0:12:15.61:0,16,131	0/1:14,0:8:6.48:6,0,31	0/0:25,0:27:59.94:0,60,623	0/0:21,1:22:31.09:0,31,563	0/0:7,0:7:21.06:0,21,232	1/1:10,11:20:29.95:260,30,0	0/0:9,0:9:14.82:0,15,138	0/0:23,2:26:25.80:0,26,706	0/0:31,3:36:20.16:0,20,883	0/0:11,0:11:33.07:0,33,356	0/0:15,0:15:42.11:0,42,464	0/0:15,1:16:10.07:0,10,331	0/0:7,0:7:18.05:0,18,199	0/0:16,0:16:35.90:0,36,367	0/0:27,0:27:66.17:0,66,721	0/0:23,0:22:51.14:0,51,564	1/1:2,11:13:26.98:234,27,0	1/1:4,18:22:50.98:442,51,0	1/1:0,3:3:2.98:26,3,0	0/0:11,0:11:24.06:0,24,258	0/0:27,0:27:57.14:0,57,621	0/0:11,0:11:27.07:0,27,298	0/0:22,1:23:28.11:0,28,538	0/0:14,0:14:42.11:0,42,465	1/1:2,23:24:65.99:573,66,0	0/0:9,0:9:20.99:0,21,201
chr10	31948083	.	C	CT	3468.41	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=-5.230;DP=573;FS=1.803;HRun=8;HaplotypeScore=68.6647;InbreedingCoeff=0.9247;MQ=79.15;MQ0=1;MQRankSum=0.402;QD=24.43;ReadPosRankSum=-1.932;VQSLOD=3.6886;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:51.03:0,51,467	0/0:15,0:15:42.01:0,42,377	0/1:23,0:22:0.37:0,0,199	0/0:23,0:17:12.22:0,12,191	0/0:27,0:27:75.03:0,75,683	0/0:31,0:31:81.03:0,81,738	0/0:15,0:15:42:0,42,378	1/1:5,28:33:84.24:959,84,0	0/0:16,0:16:48.01:0,48,434	0/0:28,0:28:75.03:0,75,684	0/0:40,0:40:99:0,114,1038	0/0:16,0:16:45.02:0,45,412	0/0:21,0:21:33.95:0,34,443	0/0:11,0:11:24.01:0,24,220	0/0:14,0:14:36.01:0,36,327	0/0:16,0:16:42.02:0,42,384	0/0:13,0:13:36.02:0,36,329	0/0:10,0:10:26.87:0,27,227	1/1:2,17:19:51.11:554,51,0	1/1:2,35:37:99:1161,102,0	1/1:1,4:5:12.04:138,12,0	0/0:17,0:17:45.02:0,45,412	0/0:17,0:17:47.98:0,48,425	0/0:15,0:15:39.01:0,39,357	0/0:21,0:21:54.03:0,54,494	0/0:27,0:27:78.04:0,78,711	1/1:1,24:25:57.17:655,57,0	0/0:19,0:19:57.03:0,57,522
chr10	31948770	.	GTATT	G	10750.47	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=10.138;DP=519;FS=1.981;HRun=0;HaplotypeScore=93.4842;InbreedingCoeff=0.9938;MQ=76.47;MQ0=0;MQRankSum=-4.282;QD=44.98;ReadPosRankSum=4.540;VQSLOD=5.5552;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,11:13:24.08:420,24,0	0/0:10,0:10:30.10:0,30,792	0/0:14,0:14:33.11:0,33,802	0/0:13,0:13:33.06:0,33,779	0/0:30,0:30:90.25:0,90,2226	0/0:23,0:23:66.23:0,66,1672	0/0:15,0:15:39.12:0,39,905	0/0:32,0:32:93.32:0,93,2295	0/0:19,0:19:57.20:0,57,1430	1/1:2,26:28:81.24:1384,81,0	1/1:2,23:25:63.21:1115,63,0	1/1:1,7:8:18.06:331,18,0	1/1:0,11:11:30.10:552,30,0	1/1:1,12:13:33.11:607,33,0	0/0:11,0:11:30.10:0,30,776	1/1:0,16:16:45.15:828,45,0	1/1:1,6:7:18.06:331,18,0	1/1:0,5:5:15.05:276,15,0	0/0:28,0:28:78.27:0,78,1986	0/0:37,0:37:99:0,99,2518	0/0:12,0:12:36.12:0,36,943	1/1:1,15:16:42.14:715,42,0	1/1:0,19:19:44.97:809,45,0	1/1:2,10:12:17.87:331,18,0	1/1:1,13:14:30.10:552,30,0	1/1:1,29:30:87.28:1561,87,0	0/0:36,0:35:99:0,102,2607	1/1:0,22:22:51.17:938,51,0
chr10	31949157	.	GC	G	2679.62	PASS	AB=0.889;AC=11;AF=0.196;AN=56;BaseQRankSum=-2.779;DP=588;FS=32.152;HRun=8;HaplotypeScore=80.8429;InbreedingCoeff=0.9009;MQ=84.61;MQ0=1;MQRankSum=-0.716;QD=21.61;ReadPosRankSum=0.026;VQSLOD=1.8497;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:69.20:0,69,816	0/0:12,0:12:30.09:0,30,362	0/0:25,0:24:11.64:0,12,442	0/0:22,0:22:50.68:0,51,536	0/0:28,0:28:81.25:0,81,978	0/0:26,0:26:72.22:0,72,869	0/0:22,0:22:66.15:0,66,760	1/1:4,20:24:57.05:542,57,0	0/0:20,0:20:60.17:0,60,714	0/0:27,0:26:69.20:0,69,822	0/0:22,0:22:60.17:0,60,713	0/0:17,0:17:48.13:0,48,568	0/0:12,0:12:36.11:0,36,435	0/0:13,0:13:33.09:0,33,387	0/0:28,0:28:78.24:0,78,942	0/0:16,0:16:45.14:0,45,543	0/0:38,0:38:99:0,105,1245	0/1:7,1:8:4.91:5,0,220	1/1:3,11:14:33.05:318,33,0	1/1:2,25:27:72.09:688,72,0	1/1:1,23:24:63.10:608,63,0	0/0:23,0:23:66.20:0,66,797	0/0:21,0:21:57.17:0,57,688	0/0:13,0:13:36.11:0,36,435	0/0:15,1:16:13.20:0,13,442	0/0:21,0:21:54.17:0,54,652	1/1:0,27:27:72.12:695,72,0	0/0:16,0:16:48.12:0,48,557
chr10	31950192	.	A	AC	4795.09	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=10.570;DP=528;FS=1.210;HRun=1;HaplotypeScore=65.6923;InbreedingCoeff=0.9994;MQ=88.52;MQ0=0;MQRankSum=0.055;QD=33.53;ReadPosRankSum=-1.118;VQSLOD=4.2981;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:57.17:0,57,726	0/0:10,0:10:30.10:0,30,390	0/0:21,0:21:57.15:0,57,667	0/0:17,0:17:48.08:0,48,582	0/0:30,0:30:84.27:0,84,1090	0/0:16,0:16:48.16:0,48,623	0/0:9,0:9:27.09:0,27,343	1/1:6,38:44:99:1398,114,0	0/0:14,0:14:42.12:0,42,529	0/0:18,0:18:54.18:0,54,701	0/0:23,0:23:66.20:0,66,842	0/0:16,0:16:45.15:0,45,584	0/0:14,0:14:39.13:0,39,506	0/0:15,0:15:42.09:0,42,511	0/0:17,0:17:51.17:0,51,662	0/0:11,0:11:33.11:0,33,428	0/0:18,0:18:45.12:0,45,567	0/0:14,0:14:39.11:0,39,492	1/1:4,13:17:35.56:513,36,0	1/1:1,31:32:82.39:1051,82,0	1/1:2,24:26:69.70:920,70,0	0/0:12,0:12:36.09:0,36,450	0/0:19,0:19:57.19:0,57,740	0/0:11,0:11:33.11:0,33,429	0/0:20,0:20:57.18:0,57,739	0/0:26,0:26:75.24:0,75,974	1/1:0,24:24:69.23:914,69,0	0/0:14,0:14:39.13:0,39,506
chr10	31950401	.	GA	G	2499.10	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=11.677;DP=537;FS=1.857;HRun=9;HaplotypeScore=58.8319;InbreedingCoeff=0.8769;MQ=70.55;MQ0=0;MQRankSum=-3.396;QD=19.99;ReadPosRankSum=-2.639;VQSLOD=3.1817;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:51.13:0,51,576	0/0:11,0:11:30.09:0,30,346	0/0:16,0:14:31.89:0,32,295	0/1:11,0:11:14.78:15,0,146	0/0:20,0:20:57.17:0,57,658	0/0:18,0:17:51.15:0,51,587	0/0:10,0:10:30.08:0,30,336	1/1:6,24:30:72.02:659,72,0	0/0:22,0:22:66.19:0,66,753	0/0:29,0:29:72.21:0,72,831	0/0:26,0:26:66.19:0,66,756	0/0:13,0:13:33.10:0,33,378	0/0:21,0:21:51.15:0,51,584	0/0:14,0:14:42.10:0,42,467	0/0:12,1:13:8.64:0,9,353	0/0:17,0:17:51.15:0,51,588	0/0:33,0:33:90.27:0,90,1038	0/0:21,0:21:45.13:0,45,519	1/1:4,9:13:36:321,36,0	1/1:8,24:32:78:704,78,0	1/1:2,9:11:30.01:274,30,0	0/0:21,0:21:57.17:0,57,657	0/0:22,0:22:57.12:0,57,635	0/0:13,0:13:36.07:0,36,401	0/0:17,0:17:51.14:0,51,580	0/0:25,0:25:63.17:0,63,709	1/1:5,23:28:78:705,78,0	0/0:9,0:10:26.91:0,27,291
chr10	31950448	.	AG	A	4640.78	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=13.049;DP=613;FS=2.692;HRun=2;HaplotypeScore=62.7408;InbreedingCoeff=0.9997;MQ=88.63;MQ0=0;MQRankSum=-3.148;QD=35.98;ReadPosRankSum=-2.023;VQSLOD=4.5587;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:69.18:0,69,961	0/0:9,0:9:27.09:0,27,405	0/0:23,0:23:66.21:0,66,947	0/0:22,0:22:63.63:0,64,875	0/0:31,0:31:90.28:0,90,1308	0/0:21,0:21:60.20:0,60,899	0/0:14,0:14:42.13:0,42,609	1/1:1,36:37:99:1348,105,0	0/0:23,0:23:69.23:0,69,1027	0/0:32,0:32:93.30:0,93,1343	0/0:31,0:31:93.30:0,93,1357	0/0:15,0:15:45.15:0,45,672	0/0:14,0:14:42.13:0,42,608	0/0:17,0:17:51.16:0,51,742	0/0:13,0:13:39.13:0,39,585	0/0:22,0:22:63.12:0,63,897	0/0:28,0:28:81.26:0,81,1182	0/0:13,0:13:36.10:0,36,511	1/1:0,26:26:78.22:992,78,0	1/1:1,19:20:60.18:762,60,0	1/1:2,18:20:54.18:701,54,0	0/0:21,0:21:60.18:0,60,852	0/0:21,0:21:63.21:0,63,936	0/0:22,0:22:66.17:0,66,945	0/0:25,0:25:75.22:0,75,1045	0/0:28,0:28:84.28:0,84,1257	1/1:1,25:26:66.17:837,66,0	0/0:15,0:15:45.15:0,45,674
chr10	31952106	.	ATT	A	5451.54	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=12.044;DP=503;FS=10.428;HRun=10;HaplotypeScore=63.7495;InbreedingCoeff=0.9875;MQ=75.72;MQ0=0;MQRankSum=-2.080;QD=26.46;ReadPosRankSum=2.030;VQSLOD=3.7597;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:54.16:0,54,812	1/1:0,10:10:27.07:301,27,0	0/0:8,0:8:8.69:0,9,221	0/0:17,0:17:16.37:0,16,232	1/1:3,22:25:60.12:667,60,0	1/1:4,12:16:33.06:368,33,0	1/1:0,11:11:30.08:334,30,0	1/1:7,16:24:41.32:516,41,0	1/1:1,17:18:42.11:468,42,0	0/0:23,0:23:60.18:0,60,877	0/0:28,0:29:81.26:0,81,1247	0/0:14,0:14:36.11:0,36,546	0/0:12,0:12:30.09:0,30,436	0/0:12,0:12:33.11:0,33,523	1/1:2,19:21:57.15:635,57,0	0/0:17,1:19:17.72:0,18,708	0/0:29,0:29:72.25:0,72,1135	0/0:12,0:12:33.11:0,33,524	1/1:6,12:18:36.06:391,36,0	1/1:3,15:18:42.09:467,42,0	1/1:2,10:12:27.07:301,27,0	0/0:18,0:18:45.15:0,45,711	0/0:18,0:18:45.15:0,45,713	0/0:12,0:12:36.11:0,36,548	0/0:28,0:28:78.23:0,78,1167	0/0:14,0:14:33.09:0,33,479	1/1:1,32:33:90.23:1003,90,0	0/0:12,0:12:33.09:0,33,480
chr10	31953547	.	CTT	C	3544.85	PASS	AB=0.769;AC=26;AF=0.464;AN=56;BaseQRankSum=2.874;DP=552;FS=5.660;HRun=3;HaplotypeScore=170.0157;InbreedingCoeff=-0.6164;MQ=35.68;MQ0=15;MQRankSum=-1.603;QD=7.45;ReadPosRankSum=2.704;VQSLOD=0.4340;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:12,1:10:12.85:13,0,121	0/1:14,5:17:13.06:106,0,13	0/0:20,1:5:11.25:0,11,162	0/0:33,0:4:7.39:0,7,120	0/1:17,15:30:46.03:254,0,46	1/1:12,9:18:15.13:268,15,0	0/1:10,1:9:20.78:22,0,21	0/1:21,3:21:84.17:84,0,296	0/1:13,6:18:99:168,0,119	0/1:20,8:27:99:240,0,253	0/1:21,11:29:99:180,0,191	0/1:9,4:11:45.94:46,0,127	0/1:13,5:16:89.88:90,0,95	0/1:14,5:18:99:173,0,212	0/0:16,0:16:48.08:0,48,855	0/1:12,7:17:99:148,0,168	0/1:8,4:10:20.43:70,0,20	0/1:16,3:18:99:117,0,222	0/1:6,2:8:24.99:51,0,25	0/1:14,19:31:69.15:328,0,69	1/1:5,0:5:8.87:35,9,0	0/1:15,9:22:84.39:239,0,84	0/1:10,15:23:82.48:284,0,82	0/0:5,0:5:2.96:0,3,19	0/1:17,7:21:28.53:131,0,29	0/1:17,8:23:99:199,0,301	0/1:7,12:19:18.27:272,0,18	0/1:10,3:13:28.64:29,0,304
chr10	31953554	.	TCTC	T	95.21	PASS	AB=0.940;AC=10;AF=0.185;AN=54;BaseQRankSum=9.877;DP=549;FS=1.863;HRun=0;HaplotypeScore=186.2187;InbreedingCoeff=0.0488;MQ=41.23;MQ0=16;MQRankSum=-5.159;QD=0.82;ReadPosRankSum=10.091;VQSLOD=0.8262;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:12,1:10:24.30:24,0,173	0/0:19,0:17:16.62:0,17,210	0/0:24,0:6:13.24:0,13,193	0/0:40,0:8:2.63:0,3,138	0/0:30,0:28:32.78:0,33,408	0/0:25,0:22:4.57:0,5,242	1/1:11,0:9:2.37:8,2,0	0/0:19,0:16:38.04:0,38,420	0/0:19,0:18:22.01:0,22,386	0/0:25,0:24:43.04:0,43,439	0/0:30,0:27:29.21:0,29,496	0/0:16,0:14:7.14:0,7,373	0/0:18,0:16:15.92:0,16,203	0/0:21,0:20:32.51:0,33,524	0/0:16,0:16:48.16:0,48,1091	0/0:17,0:15:22.45:0,22,328	0/1:12,1:12:67.68:68,0,122	0/1:17,1:17:16.90:17,0,234	0/1:4,1:5:40.51:41,0,63	0/1:31,0:29:15.30:15,0,210	1/1:2,1:3:2.96:40,3,0	0/0:28,0:26:19.38:0,19,382	0/0:25,0:23:2.06:0,2,216	./.	0/0:22,0:19:6.48:0,6,153	0/0:24,0:22:42.71:0,43,544	0/1:22,0:21:15.75:16,0,177	0/0:11,0:11:17.10:0,17,361
chr10	31953557	.	CTT	C	3493.45	PASS	AB=0.716;AC=28;AF=0.500;AN=56;BaseQRankSum=1.628;DP=555;FS=5.264;HRun=5;HaplotypeScore=168.4740;InbreedingCoeff=-0.4767;MQ=43.27;MQ0=13;MQRankSum=-1.054;QD=7.48;ReadPosRankSum=4.889;VQSLOD=-0.5207;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:12,1:12:64:64,0,74	0/1:5,5:18:11.51:121,0,12	0/0:25,0:7:2.42:0,2,85	0/0:44,0:9:6.76:0,7,148	0/1:17,15:32:42.13:260,0,42	0/1:18,7:25:14.48:211,0,14	1/1:1,2:10:5.03:31,5,0	0/1:14,1:15:27.42:27,0,62	0/1:14,5:19:89.01:149,0,89	0/1:11,8:22:16.98:260,0,17	0/1:17,11:26:99:155,0,133	0/1:11,3:13:85.72:89,0,86	0/1:8,5:14:38.57:86,0,39	0/1:14,5:20:99:206,0,117	0/0:16,0:16:47.98:0,48,427	0/1:9,7:15:99:122,0,100	0/1:11,3:14:34.32:64,0,34	0/1:14,3:16:64.45:110,0,64	0/1:2,2:4:12.29:25,0,12	1/1:7,19:28:41.94:334,42,0	0/0:3,0:3:1.55:0,2,4	0/1:15,9:25:26.90:247,0,27	0/1:7,14:22:49.04:234,0,49	0/1:3,0:6:2.84:19,0,3	1/1:4,7:19:20.89:157,21,0	0/1:11,8:21:99:217,0,120	1/1:6,12:21:14.85:274,15,0	0/1:7,3:11:32.84:33,0,108
chr10	31953573	.	CTCTT	C	2122.68	PASS	AB=0.969;AC=11;AF=0.196;AN=56;BaseQRankSum=0.446;DP=590;FS=2.456;HRun=0;HaplotypeScore=192.4104;InbreedingCoeff=0.8383;MQ=48.93;MQ0=6;MQRankSum=-3.863;QD=18.95;ReadPosRankSum=-0.477;VQSLOD=3.0923;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:15:20.07:0,20,531	0/0:20,0:18:29.82:0,30,572	0/1:30,0:6:2.82:3,0,18	0/0:45,0:17:12.67:0,13,270	0/0:36,0:34:68.95:0,69,1125	0/0:28,0:25:51.02:0,51,977	0/0:13,0:12:12.48:0,12,199	1/1:12,0:11:29.92:277,30,0	0/0:20,0:19:39.82:0,40,689	0/0:20,0:19:41.89:0,42,589	0/0:33,0:32:72:0,72,1059	0/0:13,0:11:27.01:0,27,515	0/0:17,0:15:23.93:0,24,293	0/0:23,0:22:62.92:0,63,942	0/0:22,0:22:60.16:0,60,1361	0/0:14,0:14:35.80:0,36,433	0/0:16,0:15:32.76:0,33,478	0/0:19,0:18:22.91:0,23,523	1/1:3,2:5:11.97:125,12,0	1/1:8,26:32:64.62:1094,65,0	1/1:2,0:2:3.01:38,3,0	0/0:28,0:26:53.99:0,54,865	0/0:26,0:24:50.67:0,51,517	0/0:9,0:9:6.31:0,6,223	0/0:22,0:19:35.62:0,36,612	0/0:27,0:25:58.10:0,58,763	1/1:5,23:28:42.79:752,43,0	0/0:8,0:8:14.89:0,15,109
chr10	31955018	.	T	TTTTC	7620.17	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-5.207;DP=331;FS=62.244;HRun=0;HaplotypeScore=60.5378;InbreedingCoeff=0.5632;MQ=65.73;MQ0=28;MQRankSum=-1.612;QD=25.32;ReadPosRankSum=4.386;VQSLOD=2.0182;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:20,1:14:27.73:370,28,0	1/1:7,0:7:12.04:153,12,0	0/0:18,0:8:22.96:0,23,163	0/0:12,0:7:1.46:0,1,35	1/1:17,1:17:45.01:557,45,0	1/1:8,0:7:18.06:227,18,0	1/1:7,0:7:6.02:73,6,0	1/1:23,0:19:42.02:665,42,0	1/1:3,0:3:9.02:105,9,0	1/1:14,1:13:33.04:407,33,0	1/1:13,1:14:33.10:444,33,0	1/1:5,0:4:6.02:71,6,0	1/1:6,0:5:6.02:76,6,0	1/1:10,0:9:24.07:295,24,0	1/1:3,8:11:5.83:142,6,0	1/1:2,0:2:6.02:71,6,0	1/1:11,0:11:19.87:233,20,0	1/1:12,0:11:21.06:266,21,0	1/1:11,0:11:27.04:415,27,0	1/1:18,0:18:42.07:778,42,0	1/1:11,0:9:15.05:301,15,0	1/1:5,0:5:14.96:165,15,0	1/1:16,0:15:20.12:330,20,0	1/1:5,0:4:3:38,3,0	1/1:18,1:17:18.06:262,18,0	1/1:13,0:13:35.69:424,36,0	1/1:16,0:13:30.04:490,30,0	1/1:13,0:12:21.06:265,21,0
chr10	31955023	.	T	TTTC	9275.55	PASS	AB=1.000;AC=51;AF=0.911;AN=56;BaseQRankSum=-5.122;DP=320;FS=40.147;HRun=0;HaplotypeScore=45.2251;InbreedingCoeff=0.4298;MQ=64.49;MQ0=40;MQRankSum=0.566;QD=31.87;ReadPosRankSum=6.344;VQSLOD=2.8763;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:14,7:12:27.73:472,28,0	1/1:0,6:6:12.04:240,12,0	0/0:17,0:8:23.05:0,23,166	0/0:12,0:7:2.02:0,2,26	1/1:3,17:18:45.02:790,45,0	1/1:3,7:7:18.06:359,18,0	1/1:0,4:4:6.02:116,6,0	0/1:24,0:19:30.50:417,0,30	1/1:1,2:3:9.03:171,9,0	1/1:7,10:15:38.79:571,39,0	1/1:2,10:12:33.11:633,33,0	1/1:1,4:4:6.02:115,6,0	1/1:1,4:4:6.02:120,6,0	1/1:2,9:10:24.08:470,24,0	1/1:10,0:10:5.83:83,6,0	1/1:1,2:3:9.03:173,9,0	1/1:2,6:7:21.07:409,21,0	1/1:1,9:9:21.07:419,21,0	1/1:11,0:11:3.12:275,3,0	1/1:18,0:17:42.06:610,42,0	1/1:11,0:9:15.05:240,15,0	1/1:1,5:5:14.97:252,15,0	1/1:5,12:15:20.13:526,20,0	1/1:2,2:3:3.01:60,3,0	1/1:5,12:14:18.06:342,18,0	1/1:1,12:13:35.69:621,36,0	1/1:13,0:10:30.04:374,30,0	1/1:3,8:9:21.06:418,21,0
chr10	31955025	.	T	TC	2894.30	PASS	AB=1.000;AC=52;AF=0.929;AN=56;BaseQRankSum=-1.463;DP=316;FS=22.023;HRun=0;HaplotypeScore=58.8872;InbreedingCoeff=0.3181;MQ=62.36;MQ0=40;MQRankSum=1.598;QD=9.68;ReadPosRankSum=7.343;VQSLOD=1.5971;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:13:26.56:155,27,0	1/1:5,0:5:11.50:61,12,0	0/0:17,0:8:21.58:0,22,161	0/1:11,0:6:2.71:3,0,10	1/1:21,0:19:39.85:207,40,0	1/1:10,0:7:17.22:91,17,0	1/1:3,0:3:5.72:29,6,0	1/1:15,8:18:7.76:265,8,0	1/1:3,0:3:7.79:37,8,0	0/1:17,0:15:3:149,0,3	1/1:12,0:12:30.75:158,31,0	1/1:5,0:4:5.54:25,6,0	1/1:5,0:4:5.75:30,6,0	1/1:11,0:10:22.16:112,22,0	1/1:6,0:6:5.71:37,6,0	1/1:3,0:3:8.51:42,9,0	1/1:8,0:7:19.07:96,19,0	1/1:10,0:9:20.13:106,20,0	1/1:7,4:11:7.10:143,7,0	1/1:7,11:17:41.84:356,42,0	1/1:3,8:9:14.96:128,15,0	1/1:6,0:5:14.35:76,14,0	1/1:16,0:14:1.68:104,2,0	1/1:3,0:2:2.88:15,3,0	1/1:20,0:16:17.16:90,17,0	1/1:15,0:15:16.80:175,17,0	1/1:5,8:10:29.79:235,30,0	1/1:11,0:9:2.43:85,2,0
chr10	31955026	.	T	TTTC	2729.69	PASS	AB=0.942;AC=44;AF=0.786;AN=56;BaseQRankSum=1.774;DP=318;FS=7.784;HRun=0;HaplotypeScore=66.9930;InbreedingCoeff=-0.0719;MQ=60.32;MQ0=43;MQRankSum=0.574;QD=9.04;ReadPosRankSum=7.661;VQSLOD=0.5538;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:13:44:69,0,44	1/1:5,0:5:9.89:36,10,0	0/0:16,0:7:6:0,6,89	0/1:10,0:6:4.56:5,0,31	1/1:21,0:19:16.07:154,16,0	1/1:11,0:7:16.35:90,16,0	1/1:3,0:3:5.92:39,6,0	0/1:18,6:18:22.08:291,0,22	1/1:3,0:3:8.59:65,9,0	0/1:17,0:15:36.50:36,0,82	1/1:12,0:12:25.12:113,25,0	1/1:5,0:4:5.99:51,6,0	1/1:5,0:4:5.47:25,5,0	1/1:11,0:10:22.79:144,23,0	1/1:6,0:6:3.87:12,4,0	1/1:3,0:3:8.15:51,8,0	1/1:9,0:7:19.93:112,20,0	1/1:12,0:11:19.45:101,19,0	1/1:8,4:12:23.35:241,23,0	1/1:8,10:17:31.88:452,32,0	1/1:7,4:9:14.54:188,15,0	0/1:6,0:5:5.49:49,0,5	0/1:16,0:14:10:105,0,10	1/1:3,0:2:2.60:10,3,0	0/1:19,0:15:17.57:67,0,18	0/1:14,0:14:33.55:79,0,34	0/1:5,8:10:10.56:223,0,11	0/1:11,0:9:0.42:67,0,0
chr10	31979724	.	GGTCCT	G	1631.62	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.157;DP=770;FS=8.737;HRun=0;HaplotypeScore=166.3817;InbreedingCoeff=0.9899;MQ=83.90;MQ0=0;MQRankSum=-5.155;QD=54.39;ReadPosRankSum=-0.897;VQSLOD=3.4069;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:58:99:0,172,5228	0/0:8,0:8:24.08:0,24,760	0/0:19,0:19:51.12:0,51,1474	0/0:26,0:26:48.30:0,48,1978	0/0:36,0:36:99:0,102,3073	0/0:32,0:32:93.32:0,93,2915	0/0:21,0:21:60.17:0,60,1797	0/0:28,0:28:81.28:0,81,2540	0/0:27,0:27:75.24:0,75,2216	0/0:29,0:29:84.29:0,84,2612	0/0:27,0:27:72.25:0,72,2229	0/0:26,0:26:75.26:0,75,2308	0/0:42,0:42:99:0,126,3939	0/0:19,0:19:51.16:0,51,1547	1/1:1,29:30:84.25:1726,84,0	0/0:37,0:37:99:0,108,3350	0/0:14,0:14:39.13:0,39,1237	0/0:8,0:8:18.06:0,18,512	0/0:24,0:24:60.21:0,60,1824	0/0:22,0:22:66.23:0,66,2093	0/0:38,0:38:99:0,114,3442	0/0:27,0:27:72.25:0,72,2196	0/0:35,0:35:96.33:0,96,2833	0/0:19,0:19:57.20:0,57,1736	0/0:26,0:26:78.27:0,78,2381	0/0:38,0:38:99:0,111,3395	0/0:42,0:41:99:0,120,3693	0/0:12,0:12:36.12:0,36,1142
chr10	31980860	.	AC	A	20699	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=2.217;DP=577;FS=8.593;HRun=1;HaplotypeScore=113.8319;InbreedingCoeff=0.9984;MQ=84.43;MQ0=0;MQRankSum=-9.969;QD=38.69;ReadPosRankSum=5.473;VQSLOD=4.0401;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,37:38:92.34:1263,92,0	1/1:0,15:15:42.14:587,42,0	0/0:22,0:22:46.57:0,47,895	0/0:20,0:20:54.18:0,54,847	1/1:0,29:29:78.26:1096,78,0	1/1:0,17:17:48.16:671,48,0	1/1:0,14:14:39.13:545,39,0	1/1:0,25:25:75.24:1032,75,0	1/1:0,18:18:54.18:759,54,0	1/1:0,33:33:99:1366,99,0	1/1:0,19:19:48.16:671,48,0	1/1:0,11:11:30.10:419,30,0	1/1:0,23:23:69.23:969,69,0	1/1:0,27:27:75.25:1044,75,0	1/1:1,18:19:54.18:754,54,0	1/1:0,15:15:45.15:628,45,0	1/1:1,19:20:49.87:748,50,0	1/1:0,21:21:54.18:755,54,0	1/1:0,18:18:54.18:753,54,0	1/1:0,23:23:63.21:880,63,0	1/1:0,14:14:36.12:503,36,0	1/1:0,26:26:72.24:999,72,0	1/1:0,20:20:54.18:754,54,0	1/1:0,12:12:33.11:461,33,0	1/1:0,18:18:48.16:671,48,0	1/1:0,30:30:90.28:1240,90,0	1/1:0,21:21:57.19:796,57,0	1/1:0,9:9:24.08:336,24,0
chr10	31980923	.	T	TG	1745.73	PASS	AB=0.745;AC=33;AF=0.589;AN=56;BaseQRankSum=8.848;DP=560;FS=8.619;HRun=0;HaplotypeScore=269.4182;InbreedingCoeff=-0.2746;MQ=59.36;MQ0=1;MQRankSum=-10.860;QD=3.75;ReadPosRankSum=13.522;VQSLOD=0.6702;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:11,8:19:6.48:63,0,6	0/1:7,7:14:26.65:89,0,27	0/0:27,0:22:62.26:0,62,836	0/0:32,0:29:75.13:0,75,963	0/1:18,26:44:15.39:171,0,15	1/1:7,5:12:5.64:48,6,0	1/1:8,5:13:13.72:81,14,0	0/0:35,0:34:60.20:0,60,370	1/1:11,11:22:29.10:176,29,0	0/1:21,7:28:57.40:57,0,234	1/1:6,7:13:9.11:73,9,0	0/1:12,4:16:22.82:26,0,23	0/1:7,4:11:5.82:40,0,6	1/1:12,9:21:15.92:131,16,0	0/1:10,11:21:34.05:164,0,34	0/1:11,4:15:16:48,0,16	0/1:4,2:6:11.97:30,0,12	0/1:8,1:9:23.56:24,0,59	0/1:16,3:19:8.22:8,0,169	0/1:16,11:27:68.69:117,0,69	1/1:9,1:9:2.37:8,2,0	0/1:22,8:30:72.77:73,0,94	1/1:12,15:27:16.85:153,17,0	0/1:5,3:8:11.74:12,0,19	1/1:11,11:22:0.55:104,1,0	0/1:16,9:25:73.25:73,0,204	0/1:11,8:19:83.51:84,0,97	0/1:9,6:15:60.38:60,0,109
chr10	31980924	.	A	ATGATG	12026.07	PASS	AB=0.775;AC=38;AF=0.679;AN=56;BaseQRankSum=3.680;DP=563;FS=2.270;HRun=0;HaplotypeScore=272.3494;InbreedingCoeff=-0.1796;MQ=58.93;MQ0=1;MQRankSum=-9.236;QD=23.72;ReadPosRankSum=9.787;VQSLOD=3.2888;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,8:20:11.30:486,11,0	0/1:7,7:14:43.62:530,0,44	0/0:24,0:21:57.80:0,58,1118	0/0:31,0:28:75.18:0,75,1411	1/1:19,25:45:29.32:1450,29,0	1/1:7,5:12:17.09:339,17,0	1/1:7,5:12:15.05:330,15,0	0/1:35,0:34:99:156,0,272	1/1:13,11:24:22.37:749,22,0	0/1:21,7:28:99:576,0,197	1/1:7,7:14:23.29:466,23,0	0/1:13,4:17:7.99:197,0,8	1/1:8,4:12:7.46:263,7,0	1/1:13,8:22:8.35:631,8,0	0/1:9,0:20:47.74:396,0,48	0/1:11,4:15:23.36:254,0,23	1/1:4,1:6:8.96:125,9,0	0/1:8,1:9:30.43:30,0,45	0/1:16,3:19:99:186,0,135	0/1:16,11:27:39.85:776,0,40	1/1:10,1:10:5.86:131,6,0	0/1:21,8:29:72.43:594,0,72	1/1:11,15:26:35.61:1002,36,0	0/1:5,2:8:25.64:82,0,26	1/1:11,11:22:9.12:762,9,0	0/1:17,9:26:99:575,0,195	0/1:11,8:19:99:518,0,127	0/1:9,6:15:26.16:422,0,26
chr10	31980957	.	CTTTTCTT	C	14567.74	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=9.846;DP=481;FS=9.751;HRun=0;HaplotypeScore=257.5702;InbreedingCoeff=0.9412;MQ=64.86;MQ0=0;MQRankSum=-13.688;QD=48.40;ReadPosRankSum=4.359;VQSLOD=3.2164;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,7:13:16.97:509,17,0	1/1:4,6:10:26.84:471,27,0	0/0:35,0:29:30.98:0,31,1499	0/0:24,0:23:47.35:0,47,1147	1/1:14,17:31:56.87:1091,57,0	1/1:2,11:13:36.04:788,36,0	1/1:3,7:10:24.08:541,24,0	0/0:35,0:34:69.17:0,69,1806	1/1:8,10:18:41.80:769,42,0	1/1:5,13:18:42.10:934,42,0	1/1:3,12:15:35.93:730,36,0	1/1:2,11:13:36.12:841,36,0	1/1:1,7:8:21.07:491,21,0	1/1:6,16:22:51:1035,51,0	0/0:19,0:19:51.18:0,51,1741	1/1:3,13:16:45:947,45,0	1/1:2,4:6:9.03:211,9,0	1/1:1,1:2:3.01:70,3,0	0/0:15,0:15:42.14:0,42,1376	0/0:26,0:26:69.22:0,69,2120	0/0:9,0:9:21.03:0,21,580	1/1:5,15:19:50.85:1024,51,0	1/1:10,13:23:44.96:942,45,0	1/1:1,4:5:6.02:138,6,0	1/1:7,8:15:38.74:647,39,0	1/1:5,24:29:75.19:1706,75,0	0/0:17,0:17:45.15:0,45,1522	1/1:5,9:14:35.89:684,36,0
chr10	31980981	.	TG	T	9003.49	PASS	AB=0.952;AC=54;AF=0.964;AN=56;BaseQRankSum=0.741;DP=478;FS=1.283;HRun=1;HaplotypeScore=240.0109;InbreedingCoeff=-0.0435;MQ=54.06;MQ0=0;MQRankSum=-2.286;QD=18.84;ReadPosRankSum=3.787;VQSLOD=4.8450;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,1:11:25.99:202,26,0	1/1:6,0:6:17.95:142,18,0	0/1:27,2:25:41.75:111,0,42	0/1:27,1:27:46.42:129,0,46	1/1:27,0:27:71.87:595,72,0	1/1:14,0:14:41.79:323,42,0	1/1:13,0:13:38.58:276,39,0	1/1:28,0:27:48.61:366,49,0	1/1:15,0:15:44.86:355,45,0	1/1:17,0:17:50.62:375,51,0	1/1:20,0:20:56.90:466,57,0	1/1:16,0:16:47.85:377,48,0	1/1:13,0:13:38.82:301,39,0	1/1:23,0:23:62.81:505,63,0	1/1:19,0:19:31.11:323,31,0	1/1:15,0:15:44.73:340,45,0	1/1:5,0:5:11.96:95,12,0	1/1:1,0:1:2.99:23,3,0	1/1:22,0:22:40.70:330,41,0	1/1:26,0:26:72.11:479,72,0	1/1:7,0:7:19.14:141,19,0	1/1:24,0:24:68.83:557,69,0	1/1:14,0:14:41.89:334,42,0	1/1:5,0:5:11.99:102,12,0	1/1:12,0:12:35.91:288,36,0	1/1:37,0:37:99:816,107,0	1/1:19,0:18:56.39:394,56,0	1/1:11,0:11:32.89:259,33,0
chr10	31981029	.	TTGTGTGTGTATGTG	T	16442.04	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=5.480;DP=532;FS=7.642;HRun=0;HaplotypeScore=343.6663;InbreedingCoeff=0.7322;MQ=47.64;MQ0=16;MQRankSum=0.591;QD=36.95;ReadPosRankSum=4.591;VQSLOD=2.8708;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:18:25.29:617,25,0	1/1:4,0:4:6.02:198,6,0	0/0:47,0:19:12.04:0,12,250	0/0:40,0:24:20.22:0,20,470	1/1:32,0:32:64.36:1529,64,0	1/1:18,0:18:27.02:729,27,0	1/1:11,0:11:5.97:118,6,0	1/1:29,0:27:32.85:263,33,0	1/1:16,0:16:17.24:420,17,0	1/1:21,0:21:47.88:969,48,0	1/1:21,0:21:38.52:938,39,0	1/1:9,0:9:9.03:297,9,0	1/1:18,0:18:35.08:766,35,0	1/1:20,0:20:23.75:680,24,0	1/1:12,5:17:30.09:830,30,0	1/1:17,0:17:30.02:908,30,0	1/1:12,0:12:16.72:182,17,0	1/1:2,0:2:3.01:99,3,0	1/1:17,0:14:14.97:269,15,0	1/1:26,0:26:60:1486,60,0	1/1:12,0:10:14.40:153,14,0	1/1:30,0:30:52.42:1365,52,0	1/1:19,0:19:32.98:985,33,0	1/1:10,0:10:14.47:233,14,0	1/1:10,0:10:11.76:235,12,0	1/1:26,0:26:49.06:633,49,0	1/1:24,0:23:47.58:1327,48,0	1/1:6,0:6:8.95:215,9,0
chr10	31981039	.	ATGTGTGTGTGTGTATG	A	24833.72	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=3.875;DP=525;FS=14.006;HRun=0;HaplotypeScore=313.6639;InbreedingCoeff=0.6714;MQ=40.87;MQ0=22;MQRankSum=0.302;QD=56.83;ReadPosRankSum=3.909;VQSLOD=3.2733;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,5:18:18.79:857,19,0	1/1:2,2:4:6.02:270,6,0	0/0:45,0:14:12.04:0,12,272	0/0:41,0:17:20.21:0,20,543	1/1:15,16:31:69.22:2317,69,0	1/1:11,7:18:36.11:1178,36,0	1/1:10,1:11:9.03:242,9,0	1/1:26,0:23:8.86:308,9,0	1/1:13,4:17:33.10:895,33,0	1/1:17,7:25:63.10:1842,63,0	1/1:11,9:20:39.13:1407,39,0	1/1:5,3:8:9.03:405,9,0	1/1:10,6:17:38.73:1190,39,0	1/1:13,7:20:30.10:1096,30,0	1/1:18,0:18:1.64:374,2,0	1/1:8,9:17:39.13:1440,39,0	1/1:11,0:12:17.88:376,18,0	1/1:0,2:2:3.01:135,3,0	1/1:11,2:10:17.98:432,18,0	1/1:11,13:26:66.02:2111,66,0	1/1:10,0:8:15.32:289,15,0	1/1:19,13:32:63.18:2089,63,0	1/1:8,11:19:36.12:1435,36,0	1/1:9,2:11:11.63:358,12,0	1/1:8,2:10:15.04:396,15,0	1/1:19,4:23:56.78:1151,57,0	1/1:10,11:22:51.16:1916,51,0	1/1:4,2:6:9.03:323,9,0
chr10	31981053	.	ATG	A	4811.90	PASS	AB=0.921;AC=50;AF=0.893;AN=56;BaseQRankSum=3.696;DP=499;FS=2.829;HRun=0;HaplotypeScore=240.8791;InbreedingCoeff=0.4667;MQ=33.05;MQ0=23;MQRankSum=-2.944;QD=11.35;ReadPosRankSum=4.407;VQSLOD=4.4266;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,2:17:18.17:137,18,0	1/1:2,2:4:11.82:100,12,0	0/0:37,0:5:5.99:0,6,61	0/0:38,0:13:11.58:0,12,115	1/1:26,5:31:49.89:344,50,0	1/1:13,6:19:35.45:285,35,0	1/1:6,3:9:8.53:80,9,0	1/1:19,2:19:14.91:177,15,0	1/1:11,6:17:26.71:230,27,0	1/1:20,7:27:31.99:413,32,0	1/1:17,2:19:26.23:161,26,0	1/1:6,1:7:11.75:83,12,0	1/1:13,4:17:29.28:209,29,0	1/1:15,3:18:26.86:182,27,0	0/1:13,0:13:32.88:33,0,81	1/1:11,4:15:39.03:273,39,0	1/1:11,1:12:8.85:79,9,0	1/1:2,0:2:2.90:16,3,0	0/1:13,3:13:0.32:144,0,0	1/1:23,3:27:49.55:352,50,0	1/1:8,4:10:3.01:32,3,0	1/1:24,7:31:55.87:419,56,0	1/1:14,2:16:35.20:243,35,0	1/1:11,4:15:11.86:91,12,0	1/1:6,1:7:8.81:66,9,0	1/1:18,6:24:29.66:268,30,0	1/1:20,1:20:43.73:293,44,0	1/1:5,1:6:11.82:102,12,0
chr10	31983195	.	C	CAT	512.06	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-4.937;DP=602;FS=4.227;HRun=0;HaplotypeScore=71.7509;InbreedingCoeff=0.9813;MQ=76.59;MQ0=0;MQRankSum=-0.355;QD=39.39;ReadPosRankSum=1.362;VQSLOD=5.1601;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:66.21:0,66,846	0/0:12,0:12:17.95:0,18,232	0/0:17,0:17:45.14:0,45,567	0/0:14,0:14:18.06:0,18,227	0/0:31,0:31:60.18:0,60,757	0/0:29,0:29:84.26:0,84,1067	0/0:20,0:20:33.05:0,33,392	0/0:30,0:30:75.24:0,75,953	0/0:29,0:29:78.21:0,78,962	0/0:30,0:30:81.26:0,81,1033	0/0:21,0:21:45.13:0,45,565	0/0:21,0:21:60.18:0,60,758	0/0:27,0:27:75.24:0,75,965	0/0:22,0:22:57.10:0,57,699	1/1:0,13:13:36.12:607,36,0	0/0:19,0:19:45.15:0,45,579	0/0:17,0:17:42.09:0,42,509	0/0:10,0:10:30.08:0,30,368	0/0:18,0:18:42.13:0,42,529	0/0:27,0:27:57.19:0,57,733	0/0:14,0:14:36.12:0,36,463	0/0:24,0:24:36.05:0,36,442	0/0:30,0:30:69.02:0,69,867	0/0:11,0:11:30.02:0,30,351	0/0:22,0:22:39.11:0,39,488	0/0:30,0:30:84.27:0,84,1081	0/0:26,0:25:66.19:0,66,833	0/0:12,0:12:27.06:0,27,331
chr10	31983515	.	CG	C	19889.47	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=1.173;DP=567;FS=10.485;HRun=1;HaplotypeScore=104.3910;InbreedingCoeff=0.9950;MQ=82.13;MQ0=0;MQRankSum=-7.973;QD=37.46;ReadPosRankSum=5.919;VQSLOD=3.9868;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,16:16:42.14:585,42,0	1/1:0,10:10:24.08:333,24,0	0/0:15,0:15:41.97:0,42,538	0/0:21,0:21:48.20:0,48,608	1/1:0,31:31:93.31:1283,93,0	1/1:0,29:29:81.27:1127,81,0	1/1:0,11:11:27.09:377,27,0	1/1:0,34:34:99:1354,102,0	1/1:0,23:23:63.21:877,63,0	1/1:0,27:27:81.24:1083,81,0	1/1:0,28:28:81.16:1083,81,0	1/1:0,13:13:39.13:537,39,0	1/1:0,19:19:51.17:710,51,0	1/1:0,18:18:45.15:626,45,0	1/1:0,21:21:51.17:705,51,0	1/1:0,20:20:57.19:795,57,0	1/1:0,18:18:48.16:668,48,0	1/1:0,11:11:27.09:375,27,0	1/1:0,10:10:30.07:382,30,0	1/1:0,39:39:99:1376,108,0	1/1:0,9:10:27.07:358,27,0	1/1:0,19:19:54.18:753,54,0	1/1:0,28:28:69.12:915,69,0	1/1:0,19:19:51.17:711,51,0	1/1:0,23:23:60.20:833,60,0	1/1:0,23:23:69.20:915,69,0	1/1:0,20:20:60.20:835,60,0	1/1:0,11:11:21.07:293,21,0
chr10	31984479	.	A	AACCCCC	41387.16	PASS	AB=1.000;AC=53;AF=0.946;AN=56;BaseQRankSum=-7.888;DP=587;FS=14.311;HRun=0;HaplotypeScore=119.1809;InbreedingCoeff=0.5737;MQ=66.86;MQ0=1;MQRankSum=-7.559;QD=72.48;ReadPosRankSum=4.374;VQSLOD=5.1785;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:21,22:46:90.31:2924,90,0	1/1:4,10:14:33.11:1125,33,0	0/0:16,0:15:40.68:0,41,815	0/1:23,0:23:22.42:22,0,766	1/1:9,12:23:36.12:1225,36,0	1/1:7,9:16:42.14:1429,42,0	1/1:8,10:18:48.16:1562,48,0	1/1:14,17:32:81.23:2568,81,0	1/1:5,18:23:69.24:2253,69,0	1/1:2,14:16:41.82:1352,42,0	1/1:7,10:19:33.11:1129,33,0	1/1:5,12:17:45.15:1415,45,0	1/1:4,17:26:63.22:2127,63,0	1/1:11,16:27:69.24:2314,69,0	1/1:6,19:26:63.22:2144,63,0	1/1:5,9:15:36.12:1169,36,0	1/1:11,12:25:57.20:1870,57,0	1/1:3,7:10:24.04:738,24,0	1/1:8,12:24:60.15:1595,60,0	1/1:6,20:27:66.23:2237,66,0	1/1:7,7:15:24.08:822,24,0	1/1:6,11:19:39.13:1335,39,0	1/1:6,13:20:48.16:1625,48,0	1/1:10,11:23:39.13:1278,39,0	1/1:4,7:12:21.07:716,21,0	1/1:8,11:21:51.17:1680,51,0	1/1:9,19:30:78.27:2628,78,0	1/1:3,1:4:3.01:104,3,0
chr10	31986624	.	T	TGATA	5654.28	PASS	AC=22;AF=0.423;AN=52;BaseQRankSum=-7.307;DP=664;FS=1.592;HRun=0;HaplotypeScore=113.1054;InbreedingCoeff=0.9397;MQ=68.45;MQ0=4;MQRankSum=1.593;QD=21.83;ReadPosRankSum=-0.428;VQSLOD=4.5826;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:2.63:0,3,563	1/1:11,2:14:6.48:140,6,0	./.	./.	1/1:19,13:33:39.13:898,39,0	1/1:17,9:27:18.06:420,18,0	1/1:10,8:20:14.39:390,14,0	1/1:43,0:43:11.44:87,11,0	1/1:7,9:17:24.08:560,24,0	0/0:37,0:37:63.21:0,63,961	0/0:35,0:35:45.14:0,45,668	0/0:15,0:15:21.07:0,21,315	0/0:11,0:19:21.02:0,21,196	0/0:20,1:20:36.09:0,36,503	1/1:20,0:20:27.09:486,27,0	0/0:17,0:17:24.08:0,24,368	0/0:20,0:20:27.08:0,27,393	0/0:17,0:17:21.07:0,21,322	1/1:12,8:19:21.07:484,21,0	1/1:10,13:26:39.09:860,39,0	1/1:6,6:13:18.06:420,18,0	0/0:25,0:25:33.10:0,33,480	0/0:29,0:29:39.13:0,39,597	0/0:15,0:15:18.06:0,18,276	0/0:27,0:27:39.12:0,39,565	0/0:32,0:32:39.12:0,39,578	1/1:13,13:26:39.13:909,39,0	0/0:17,0:17:14.16:0,14,228
chr10	31986632	.	A	AGATT	3439.25	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=10.458;DP=671;FS=1.413;HRun=0;HaplotypeScore=111.8793;InbreedingCoeff=-0.0186;MQ=63.76;MQ0=9;MQRankSum=1.557;QD=15.63;ReadPosRankSum=6.727;VQSLOD=2.9676;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:62.50:0,63,1060	0/1:14,0:14:54:54,0,217	0/0:21,0:14:34.77:0,35,399	0/0:23,0:16:34.63:0,35,354	0/1:34,0:34:99:488,0,346	0/1:27,0:27:99:204,0,328	0/1:22,0:22:99:180,0,187	0/0:46,0:46:99:0,131,1121	0/1:16,0:16:99:318,0,108	0/0:35,0:35:99:0,105,1596	0/0:35,0:35:90.10:0,90,1215	0/0:16,0:16:48.05:0,48,624	0/0:20,0:18:51.04:0,51,500	0/0:23,0:22:63.10:0,63,893	1/1:1,18:20:27.09:727,27,0	0/0:17,0:17:51.06:0,51,682	0/0:19,0:19:44.99:0,45,642	0/0:15,0:15:42:0,42,563	0/1:22,0:19:99:240,0,221	0/1:28,0:28:99:470,0,210	0/1:12,0:12:92.85:234,0,93	0/0:25,0:25:72.09:0,72,947	0/0:32,0:32:78.05:0,78,1053	0/0:13,0:13:30.05:0,30,440	0/0:27,0:27:78.11:0,78,1064	0/0:33,0:33:99:0,99,1295	0/1:25,0:25:99:524,0,161	0/0:18,0:18:44.09:0,44,498
chr10	31986876	.	T	TC	16243.48	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-14.479;DP=656;FS=4.900;HRun=4;HaplotypeScore=58.1075;InbreedingCoeff=0.9971;MQ=87.75;MQ0=0;MQRankSum=-4.909;QD=35.31;ReadPosRankSum=4.303;VQSLOD=5.2350;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,49:51:99:1887,138,0	1/1:0,8:8:21.07:287,21,0	0/0:22,0:22:57.16:0,57,647	0/0:25,0:24:33.85:0,34,542	1/1:1,26:27:72.24:984,72,0	1/1:1,18:19:45.15:615,45,0	1/1:1,16:17:36.12:492,36,0	0/0:25,0:25:75.20:0,75,834	1/1:2,24:26:57.19:780,57,0	1/1:2,29:32:90.26:1193,90,0	1/1:1,20:21:60.20:809,60,0	1/1:1,19:20:54.18:738,54,0	1/1:0,27:27:63.21:861,63,0	1/1:0,24:24:66.22:902,66,0	0/0:27,0:27:81.23:0,81,919	1/1:1,18:19:51.17:697,51,0	1/1:1,30:31:87.29:1190,87,0	1/1:2,8:10:18.06:246,18,0	0/0:8,0:8:21.06:0,21,238	0/0:29,0:29:81.21:0,81,909	0/0:32,0:32:90.26:0,90,1020	1/1:0,13:13:36.12:492,36,0	1/1:3,22:25:66.21:891,66,0	1/1:2,22:24:57.19:780,57,0	1/1:0,23:23:60.20:820,60,0	1/1:0,29:30:87.25:1168,87,0	0/0:28,0:28:84.24:0,84,952	1/1:0,13:12:30.10:410,30,0
chr10	31987020	.	A	ATGAT	33066.29	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-15.295;DP=697;FS=3.356;HRun=0;HaplotypeScore=95.8557;InbreedingCoeff=0.9992;MQ=67.34;MQ0=1;MQRankSum=-3.859;QD=63.59;ReadPosRankSum=5.868;VQSLOD=6.9795;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,29:38:78.27:2071,78,0	1/1:0,12:12:30.10:799,30,0	0/0:16,0:16:42.09:0,42,692	0/0:20,0:20:51.10:0,51,841	1/1:1,20:23:63.22:1670,63,0	1/1:1,33:34:81.28:2155,81,0	1/1:3,7:11:21.07:560,21,0	0/0:22,0:22:54.18:0,54,1007	1/1:6,15:21:45.12:1141,45,0	1/1:4,24:29:81.24:1875,81,0	1/1:3,30:34:81.28:2139,81,0	1/1:6,22:29:63.22:1667,63,0	1/1:4,23:27:69.24:1829,69,0	1/1:6,19:26:60.21:1578,60,0	0/0:25,0:25:72.23:0,72,1313	1/1:5,19:24:60.21:1587,60,0	1/1:3,24:28:66.23:1749,66,0	1/1:2,14:16:42.14:1118,42,0	0/0:20,0:20:57.18:0,57,1011	0/0:21,0:21:60.21:0,60,1120	0/0:25,0:25:72.23:0,72,1288	1/1:1,35:36:96.33:2557,96,0	1/1:5,24:30:72.11:1908,72,0	1/1:4,17:21:42.14:1116,42,0	1/1:1,21:23:54.19:1439,54,0	1/1:1,38:39:99:2829,108,0	0/0:28,0:27:81.26:0,81,1470	1/1:1,16:17:48.16:1280,48,0
chr10	31988339	.	C	CTT	12872.80	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-8.029;DP=556;FS=2.685;HRun=8;HaplotypeScore=65.1697;InbreedingCoeff=0.9699;MQ=71.44;MQ0=1;MQRankSum=-1.513;QD=33.35;ReadPosRankSum=3.416;VQSLOD=5.0388;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,30:33:84.29:1333,84,0	1/1:1,0:10:24.04:242,24,0	0/0:14,0:13:26.90:0,27,277	0/0:16,0:16:22.92:0,23,233	1/1:2,1:24:33.45:516,33,0	1/1:3,0:23:54.09:522,54,0	1/1:0,0:8:4.32:104,4,0	0/0:27,0:27:60.09:0,60,635	1/1:4,0:19:33.04:309,33,0	1/1:3,27:30:75.24:1156,75,0	1/1:3,18:23:54.18:857,54,0	1/1:5,15:20:36.12:572,36,0	1/1:0,9:9:27.09:429,27,0	1/1:3,15:18:39.09:591,39,0	0/0:24,0:24:60.15:0,60,669	1/1:2,13:16:36.12:552,36,0	1/1:4,9:13:24.08:381,24,0	1/1:3,17:20:42.14:667,42,0	0/0:31,0:31:78.16:0,78,854	0/0:23,0:23:63.15:0,63,692	0/0:14,0:14:36.07:0,36,391	1/1:1,18:20:45.15:714,45,0	1/1:3,20:23:62.02:957,62,0	1/1:0,7:7:12.04:190,12,0	1/1:2,18:20:45.15:714,45,0	1/1:2,33:35:99:1542,99,0	0/0:21,0:21:60.14:0,60,656	1/1:2,13:15:33.11:524,33,0
chr10	31988840	.	TTCTCTCTCTCTCTCTCTCTC	T	662.96	PASS	AC=8;AF=0.148;AN=54;BaseQRankSum=3.650;DP=394;FS=2.577;HRun=0;HaplotypeScore=169.7161;InbreedingCoeff=0.6329;MQ=61.11;MQ0=23;MQRankSum=1.611;QD=8.61;ReadPosRankSum=-0.993;VQSLOD=2.7922;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:23:15.05:0,15,1149	0/0:5,0:5:3.01:0,3,230	./.	0/0:15,0:6:0:0,0,0	0/0:19,0:18:12.03:0,12,437	0/0:14,0:13:12.04:0,12,865	0/0:21,0:19:11.92:0,12,808	1/1:28,6:34:10.58:218,11,0	0/0:16,0:15:12.97:0,13,536	0/0:12,0:12:24.08:0,24,1481	0/0:8,0:8:3.01:0,3,125	0/0:10,0:10:10.80:0,11,557	0/0:16,0:16:12.41:0,12,638	0/0:12,0:12:11.16:0,11,378	0/0:14,0:11:12.04:0,12,744	0/0:9,0:9:12.04:0,12,935	0/0:10,0:8:21.06:0,21,838	0/0:8,0:5:9.03:0,9,558	1/1:20,0:17:6.47:159,6,0	0/0:11,1:11:3.01:0,3,187	1/1:7,0:7:3.01:50,3,0	0/0:17,0:17:12.04:0,12,611	0/0:11,0:11:9.03:0,9,429	0/0:12,0:9:6.02:0,6,517	0/0:13,0:13:12.04:0,12,540	0/0:12,0:12:23.44:0,23,1554	1/1:15,0:16:17.84:370,18,0	0/0:14,0:10:15.05:0,15,1030
chr10	31988914	.	C	CAGAGAG	556.63	PASS	AB=0.971;AC=18;AF=0.391;AN=46;BaseQRankSum=1.009;DP=320;FS=23.889;HRun=0;HaplotypeScore=63.4998;InbreedingCoeff=-0.1034;MQ=34.33;MQ0=85;MQRankSum=1.536;QD=2.96;ReadPosRankSum=-1.573;VQSLOD=-0.0675;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:17,0:11:35.34:35,0,40	1/1:3,0:3:0.05:70,0,0	./.	./.	1/1:14,0:10:2.04:6,2,0	0/1:9,4:11:16.20:48,0,16	1/1:19,0:12:3.01:47,3,0	0/0:18,0:13:17.61:0,18,266	0/1:13,0:11:0.93:1,0,27	0/1:6,0:3:29.63:30,0,34	./.	0/0:4,0:2:2.22:0,2,7	0/0:7,0:5:8.40:0,8,42	0/0:13,0:10:2.94:0,3,20	0/0:10,0:7:6:0,6,65	./.	0/1:11,0:4:19.72:20,0,53	0/1:19,0:8:16.42:16,0,71	0/1:10,0:10:63.61:64,0,126	0/1:19,0:16:1.89:185,0,2	./.	0/0:12,0:11:3.01:0,3,56	0/1:15,0:13:22.69:23,0,149	0/0:15,0:6:2.92:0,3,17	1/1:11,0:10:2.86:93,3,0	0/0:8,0:5:11.62:0,12,139	0/1:16,0:14:6.69:50,0,7	0/0:26,0:10:19.98:0,20,181
chr10	31988916	.	C	CAGAGAGAG	1525.99	PASS	AB=1.000;AC=31;AF=0.738;AN=42;BaseQRankSum=-1.948;DP=331;FS=0.000;HRun=0;HaplotypeScore=73.2022;InbreedingCoeff=0.2063;MQ=35.32;MQ0=85;MQRankSum=0.281;QD=7.06;ReadPosRankSum=-0.263;VQSLOD=1.0828;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:12:10.56:120,11,0	1/1:3,0:3:3.01:100,3,0	./.	./.	./.	1/1:14,0:10:3.01:72,3,0	1/1:20,0:13:3.01:70,3,0	1/1:21,0:16:15:215,15,0	./.	0/1:6,0:3:13.54:49,0,14	./.	1/1:4,0:2:1.82:5,2,0	1/1:7,0:5:1.06:4,1,0	1/1:12,0:9:2.97:23,3,0	0/0:10,0:7:3.01:0,3,44	./.	1/1:13,0:6:6.49:108,6,0	1/1:19,0:8:7.97:85,8,0	1/1:10,0:10:9.03:149,9,0	1/1:21,0:18:9.75:295,10,0	./.	0/0:8,0:12:3.01:0,3,47	0/1:14,0:12:80.48:80,0,118	0/0:15,0:6:2.22:0,2,7	1/1:10,0:9:10.28:170,10,0	0/1:9,0:6:29.24:29,0,61	1/1:5,6:13:3.01:76,3,0	0/0:26,0:10:6.76:0,7,95
chr10	31989206	.	T	TAAATAAAA	1966.71	PASS	AB=1.000;AC=28;AF=0.519;AN=54;BaseQRankSum=3.156;DP=232;FS=26.208;HRun=0;HaplotypeScore=47.3451;InbreedingCoeff=0.5891;MQ=49.59;MQ0=7;MQRankSum=1.460;QD=13.75;ReadPosRankSum=-1.426;VQSLOD=0.3694;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:7,0:6:17.94:160,18,0	0/0:6,0:5:14.93:0,15,118	0/0:5,0:4:8.94:0,9,67	0/0:8,0:7:11.89:0,12,101	0/0:7,0:7:17.96:0,18,144	0/0:9,0:8:23.60:0,24,151	0/0:4,0:4:8.91:0,9,63	0/1:45,0:42:99:287,0,667	0/0:6,0:6:17.94:0,18,143	1/1:0,2:2:6:53,6,0	1/1:7,0:6:18.01:165,18,0	1/1:6,0:5:15.02:151,15,0	1/1:5,0:5:14.97:127,15,0	1/1:4,0:5:11.98:205,12,0	0/1:7,0:6:30.53:31,0,63	1/1:5,0:4:12:107,12,0	1/1:9,1:8:17.81:134,18,0	1/1:11,0:10:23.98:231,24,0	0/1:12,0:8:81.16:81,0,129	0/0:8,0:7:20.98:0,21,174	0/0:2,0:2:5.92:0,6,42	1/1:2,0:2:6.01:55,6,0	1/1:3,0:3:9:81,9,0	1/1:3,0:3:9:80,9,0	./.	0/1:11,0:11:71.93:221,0,72	0/0:8,0:7:20.95:0,21,169	0/0:7,7:11:9.03:0,9,247
chr10	31989843	.	T	TAC	2464.07	PASS	AB=0.952;AC=33;AF=0.589;AN=56;BaseQRankSum=-2.129;DP=640;FS=8.703;HRun=0;HaplotypeScore=186.5706;InbreedingCoeff=0.1967;MQ=61.67;MQ0=4;MQRankSum=1.478;QD=5.12;ReadPosRankSum=2.059;VQSLOD=2.5231;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:25,14:38:20.97:284,21,0	0/0:12,0:12:14.86:0,15,89	0/0:34,1:21:1.55:0,2,4	0/0:23,0:19:6.02:0,6,69	0/0:28,0:28:1.74:0,2,119	0/0:18,0:18:27.53:0,28,173	0/1:33,0:33:18.57:19,0,87	1/1:30,0:29:23.78:188,24,0	0/0:19,0:19:19.04:0,19,129	0/1:20,1:21:20.50:184,0,20	0/1:21,0:21:17:109,0,17	0/1:16,0:17:10.18:37,0,10	1/1:19,1:19:3.07:92,3,0	0/1:17,0:18:0.46:45,0,0	0/0:14,0:24:0.47:0,0,1	0/1:21,0:21:11.78:34,0,12	0/1:13,4:17:7.61:286,0,8	1/1:14,0:12:12.43:105,12,0	1/1:10,0:10:14.98:147,15,0	0/1:23,0:23:12.36:64,0,12	1/1:38,0:36:7.10:77,7,0	1/1:29,2:32:17.96:167,18,0	1/1:23,0:23:7.94:77,8,0	1/1:34,0:34:3.87:162,4,0	1/1:19,0:19:8.20:70,8,0	1/1:16,1:17:23.97:219,24,0	1/1:23,0:23:20.68:179,21,0	0/1:9,1:10:10.17:87,0,10
chr10	31989862	.	A	ACACA	5823.69	PASS	AB=1.000;AC=46;AF=0.821;AN=56;BaseQRankSum=-2.248;DP=658;FS=0.787;HRun=0;HaplotypeScore=207.3358;InbreedingCoeff=-0.0220;MQ=43.93;MQ0=11;MQRankSum=-1.928;QD=9.06;ReadPosRankSum=-0.160;VQSLOD=3.8506;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:40,0:39:14.87:127,15,0	0/1:12,0:12:42.05:42,0,52	1/1:21,0:7:2.98:21,3,0	0/0:15,0:6:6.02:0,6,97	0/1:30,0:30:45.96:46,0,47	0/1:21,0:21:37.89:38,0,53	0/1:30,0:30:4.47:101,0,4	1/1:34,0:33:21.95:195,22,0	0/1:19,0:19:56.13:56,0,110	0/1:18,0:18:12.54:593,0,13	0/1:19,0:19:30.59:340,0,31	1/1:15,0:15:9.93:157,10,0	1/1:16,6:22:17.49:235,17,0	1/1:21,0:19:14.84:253,15,0	1/1:19,0:19:0.47:2,0,0	1/1:21,0:20:14.10:181,14,0	0/1:20,0:20:32.28:81,0,32	1/1:18,0:16:17.21:311,17,0	1/1:13,0:13:19.96:244,20,0	1/1:26,0:26:2.66:164,3,0	1/1:41,0:39:22.15:138,22,0	1/1:33,0:32:17.63:364,18,0	1/1:28,0:27:14.26:308,14,0	1/1:39,0:38:29.06:555,29,0	1/1:21,0:19:11.73:255,12,0	1/1:20,0:20:18.88:388,19,0	1/1:26,0:24:23.57:360,24,0	1/1:15,0:14:23.33:268,23,0
chr10	31989866	.	ACACG	A	1083.65	PASS	AB=0.986;AC=20;AF=0.357;AN=56;BaseQRankSum=-0.686;DP=637;FS=4.965;HRun=0;HaplotypeScore=214.0171;InbreedingCoeff=-0.3940;MQ=42.81;MQ0=12;MQRankSum=-0.465;QD=2.44;ReadPosRankSum=-5.531;VQSLOD=1.0619;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:36,3:38:5.75:40,0,6	0/0:12,0:12:5.42:0,5,282	0/0:15,0:3:1.55:0,2,4	0/0:12,0:2:6.02:0,6,136	0/0:30,0:30:6:0,6,300	0/0:21,0:21:19.44:0,19,381	0/1:30,0:30:16.60:17,0,242	0/1:31,0:30:36.91:37,0,433	0/1:17,0:17:20.05:20,0,204	0/1:18,0:17:35.58:36,0,221	0/0:18,0:18:9.89:0,10,125	0/0:16,0:16:5.29:0,5,28	1/1:22,0:21:2.29:102,2,0	0/0:21,0:19:4.40:0,4,25	0/0:20,0:20:2.91:0,3,13	1/1:20,0:19:0.06:34,0,0	0/1:16,2:18:90.79:155,0,91	0/1:17,0:15:22.99:66,0,23	0/1:14,0:14:86.47:86,0,139	0/1:26,0:26:47.01:100,0,47	0/1:41,0:38:42.99:43,0,55	0/1:33,0:32:14.02:23,0,14	0/0:26,1:26:4.26:0,4,32	0/1:38,0:37:33.69:34,0,99	0/1:21,0:19:7.35:7,0,17	0/1:18,1:19:49.56:187,0,50	0/1:26,0:24:34.28:206,0,34	0/1:15,0:14:38.60:39,0,42
chr10	31989868	.	ACG	A	3884.03	PASS	AB=0.847;AC=37;AF=0.661;AN=56;BaseQRankSum=1.650;DP=627;FS=2.207;HRun=0;HaplotypeScore=192.9126;InbreedingCoeff=-0.1290;MQ=42.56;MQ0=13;MQRankSum=-0.337;QD=6.67;ReadPosRankSum=-2.066;VQSLOD=2.9808;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:38,1:38:74.09:74,0,169	0/0:12,0:12:5.10:0,5,129	1/1:12,0:1:2.98:21,3,0	0/0:14,0:3:8.92:0,9,131	0/1:28,0:28:38.89:39,0,85	0/1:21,0:21:18.09:18,0,143	0/1:28,0:28:39.86:40,0,90	0/1:31,1:31:69.34:69,0,391	0/1:16,1:17:67.09:115,0,67	0/1:8,10:17:99:384,0,115	0/1:4,13:17:39.54:137,0,40	1/1:4,12:16:12.02:156,12,0	1/1:19,3:21:14.43:258,14,0	1/1:7,14:19:15.03:202,15,0	0/0:19,0:19:1.60:0,2,11	1/1:5,16:20:17.14:230,17,0	0/1:19,0:19:58.78:59,0,164	1/1:9,6:13:15.15:213,15,0	0/1:13,1:14:74.52:75,0,75	1/1:24,3:27:8.62:172,9,0	1/1:39,1:36:19.22:137,19,0	0/1:10,21:30:7.25:159,0,7	1/1:10,16:26:15.04:181,15,0	1/1:21,17:37:34.72:307,35,0	1/1:8,13:19:11.99:154,12,0	0/1:13,5:18:20.25:334,0,20	1/1:26,0:24:7.48:159,7,0	0/1:5,10:14:0.41:192,0,0
chr10	31989875	.	C	CACAT	1482.25	PASS	AB=0.972;AC=18;AF=0.321;AN=56;BaseQRankSum=-2.532;DP=640;FS=17.245;HRun=0;HaplotypeScore=232.9058;InbreedingCoeff=-0.1211;MQ=41.97;MQ0=15;MQRankSum=0.385;QD=3.83;ReadPosRankSum=0.404;VQSLOD=0.9671;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:38:40.56:0,41,429	0/0:14,0:14:26.24:0,26,323	0/0:9,0:2:3.01:0,3,50	0/0:20,0:6:13.15:0,13,171	0/0:28,0:28:26.51:0,27,358	0/0:21,0:21:39.05:0,39,491	0/0:28,0:28:21.92:0,22,297	0/1:34,0:33:99:213,0,716	0/0:18,0:18:34.39:0,34,416	0/1:20,0:19:80.29:80,0,284	0/1:18,0:18:37.01:37,0,49	0/0:18,0:18:5.07:0,5,58	0/1:20,0:20:31.96:32,0,107	0/0:23,0:21:1.38:0,1,43	0/0:16,0:16:3.01:0,3,42	0/1:22,0:20:12.50:13,0,95	0/0:19,0:18:27.41:0,27,353	0/1:15,0:13:7.17:7,0,121	0/1:10,5:15:99:284,0,188	0/1:25,3:29:1.14:292,0,1	1/1:37,2:36:17.82:154,18,0	0/1:30,0:29:16.40:37,0,16	0/1:26,0:26:4.91:5,0,20	0/1:34,0:34:1.46:1,0,97	0/1:20,0:18:4.91:5,0,38	0/1:19,0:19:16:16,0,253	1/1:4,20:26:8.33:443,8,0	0/1:15,0:14:18.94:19,0,103
chr10	31989880	.	ACG	A	636.81	PASS	AB=0.960;AC=25;AF=0.446;AN=56;BaseQRankSum=-0.967;DP=623;FS=13.530;HRun=0;HaplotypeScore=219.6143;InbreedingCoeff=-0.5554;MQ=42.65;MQ0=17;MQRankSum=2.018;QD=1.25;ReadPosRankSum=-1.930;VQSLOD=0.9685;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:37:7.55:0,8,182	0/1:14,0:14:29.14:29,0,33	0/0:9,0:4:6.02:0,6,92	0/1:18,4:6:4.81:5,0,167	0/1:23,1:24:19.50:62,0,20	0/1:20,0:20:13.04:89,0,13	0/1:29,0:29:51.30:66,0,51	0/1:35,0:34:20.17:20,0,668	0/1:19,0:19:16.30:32,0,16	0/1:17,2:18:40.82:41,0,230	0/1:18,1:18:29.21:29,0,46	0/1:17,0:17:15.30:20,0,15	0/1:18,1:19:18.13:18,0,18	0/1:22,1:21:8.56:9,0,39	1/1:17,1:18:5.59:42,6,0	0/1:23,0:21:25.47:25,0,43	0/0:17,0:16:14.67:0,15,195	0/1:15,1:14:13.33:29,0,13	0/0:15,0:14:2.24:0,2,222	0/1:27,1:28:26.04:26,0,32	0/0:35,0:30:11.54:0,12,46	0/1:26,3:28:20.53:65,0,21	0/1:22,0:22:17.39:17,0,19	0/1:30,3:32:5.14:5,0,52	1/1:19,1:18:3.38:43,3,0	0/1:18,1:19:34.83:35,0,141	0/1:25,0:23:55.48:55,0,82	0/1:14,1:14:27.12:27,0,50
chr10	31989882	.	GCGCACA	G	4642.34	PASS	AB=1.000;AC=43;AF=0.768;AN=56;BaseQRankSum=-5.430;DP=611;FS=35.243;HRun=0;HaplotypeScore=230.7437;InbreedingCoeff=0.2060;MQ=42.73;MQ0=19;MQRankSum=1.967;QD=8.43;ReadPosRankSum=-4.389;VQSLOD=1.5786;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:38,0:38:24.18:364,24,0	0/1:14,0:14:79.64:132,0,80	0/0:13,0:4:6.02:0,6,105	0/0:24,0:7:14.48:0,14,194	0/0:23,0:23:5.78:0,6,46	0/1:19,0:19:53.61:72,0,54	1/1:26,0:26:17.84:261,18,0	1/1:22,11:32:32.94:374,33,0	0/1:19,0:19:70.43:311,0,70	1/1:19,0:18:11.94:135,12,0	1/1:19,0:18:3.01:49,3,0	1/1:17,0:17:3.38:66,3,0	1/1:17,0:17:16.28:251,16,0	1/1:21,0:19:13.76:179,14,0	1/1:17,0:17:8.96:104,9,0	1/1:23,0:21:10.40:118,10,0	1/1:17,0:16:11.71:146,12,0	1/1:16,0:14:8.69:327,9,0	0/1:15,0:14:30.71:204,0,31	1/1:24,4:28:1.13:401,1,0	1/1:34,0:29:5.05:104,5,0	0/1:29,0:28:0:0,0,0	1/1:19,0:19:3.01:50,3,0	1/1:32,0:31:14.28:238,14,0	1/1:20,0:18:9.50:149,10,0	1/1:20,0:20:29.58:532,30,0	0/1:25,0:23:2.32:69,0,2	0/1:14,0:13:7.51:8,0,52
chr10	31989888	.	ACG	A	1082.95	PASS	AB=0.911;AC=21;AF=0.375;AN=56;BaseQRankSum=4.124;DP=626;FS=45.639;HRun=0;HaplotypeScore=223.7099;InbreedingCoeff=-0.4297;MQ=43.53;MQ0=22;MQRankSum=1.633;QD=2.51;ReadPosRankSum=2.695;VQSLOD=1.4113;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:35,2:39:33.12:151,0,33	0/1:8,4:13:19.92:20,0,183	0/0:24,0:6:9.02:0,9,122	0/1:30,0:10:10.77:11,0,298	0/0:21,2:24:16.91:0,17,165	0/1:11,3:14:10.97:11,0,163	0/1:22,3:26:26.64:27,0,83	0/0:30,0:29:68.25:0,68,710	0/1:21,0:21:99:139,0,142	0/1:18,1:18:55.18:55,0,109	0/1:21,1:21:13.47:32,0,13	0/1:16,1:17:7.73:8,0,41	0/1:14,2:16:36.97:81,0,37	0/1:21,1:20:17.18:17,0,66	0/1:16,2:18:12.86:35,0,13	0/1:23,0:21:32.56:33,0,73	0/1:16,2:17:33.50:65,0,34	1/1:15,2:15:13.09:169,13,0	0/0:14,0:14:32.65:0,33,300	0/0:29,0:29:1.57:0,2,204	0/0:37,0:32:25.25:0,25,262	0/1:23,2:24:0.05:0,0,0	0/1:18,0:19:9.18:10,0,9	0/1:30,3:32:53.75:133,0,54	0/1:19,2:19:34.61:51,0,35	0/1:14,4:19:58.85:189,0,59	0/0:22,0:21:2.24:0,2,179	0/0:12,0:12:1.58:0,2,73
chr10	31989894	.	ACG	A	1462.18	PASS	AB=0.920;AC=23;AF=0.411;AN=56;BaseQRankSum=2.144;DP=658;FS=36.822;HRun=0;HaplotypeScore=229.5483;InbreedingCoeff=-0.3591;MQ=44.27;MQ0=24;MQRankSum=2.764;QD=3.16;ReadPosRankSum=-0.184;VQSLOD=1.4188;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:38,2:40:41.05:131,0,41	0/1:11,4:15:65.41:65,0,74	0/0:31,0:7:18.06:0,18,293	0/0:36,0:12:15.29:0,15,413	0/1:25,1:26:20.11:20,0,96	0/1:11,3:14:39.39:39,0,49	0/1:24,3:27:7.93:127,0,8	0/0:29,0:28:66.08:0,66,688	0/1:24,0:24:66.41:122,0,66	0/1:23,1:23:79.70:158,0,80	0/1:21,1:21:7.35:75,0,7	0/1:16,1:17:13.60:14,0,39	0/1:16,2:18:48.74:93,0,49	0/1:20,1:19:18.54:19,0,58	0/1:18,2:20:2.18:96,0,2	0/1:23,1:22:58.94:59,0,61	0/1:16,2:17:33.37:66,0,33	1/1:15,2:15:15.64:175,16,0	0/0:14,0:13:31.65:0,32,284	0/0:25,0:26:21.06:0,21,271	0/0:38,0:33:31.26:0,31,373	1/1:23,2:24:3:25,3,0	0/1:16,0:16:8.81:10,0,9	0/1:31,3:33:43.97:79,0,44	0/1:24,1:23:42.46:54,0,42	0/1:17,5:22:66.62:165,0,67	0/0:22,0:21:20.72:0,21,206	0/1:11,1:12:35.58:36,0,42
chr10	31989900	.	ACG	A	1371.70	PASS	AB=0.930;AC=21;AF=0.375;AN=56;BaseQRankSum=1.907;DP=636;FS=37.349;HRun=0;HaplotypeScore=216.7661;InbreedingCoeff=-0.3582;MQ=46.07;MQ0=19;MQRankSum=1.802;QD=3.21;ReadPosRankSum=2.047;VQSLOD=1.5758;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:36,2:38:47.78:131,0,48	0/1:9,4:13:47.99:48,0,76	0/0:36,0:13:35.97:0,36,569	0/0:33,1:14:39.03:0,39,568	0/1:24,1:25:1.67:2,0,104	0/1:12,3:15:45.47:60,0,45	0/1:21,3:24:13.92:98,0,14	0/0:23,0:23:62.61:0,63,706	0/1:25,0:25:67.21:128,0,67	0/1:21,1:22:91.04:125,0,91	0/1:21,1:21:11.69:74,0,12	0/1:13,1:14:10.78:11,0,41	0/1:19,2:21:56.10:118,0,56	0/1:19,1:19:17.87:18,0,59	0/0:21,0:21:23.85:0,24,225	0/1:23,0:21:52.81:53,0,60	0/1:16,2:17:36.62:83,0,37	1/1:13,2:14:13.20:151,13,0	0/0:15,0:14:37.49:0,37,367	0/0:26,0:26:27.45:0,27,375	0/0:36,0:32:31.33:0,31,427	0/1:22,2:23:0.96:20,0,1	0/1:16,0:16:7.59:33,0,8	0/1:29,3:31:42.45:114,0,42	0/1:24,1:24:45.21:50,0,45	0/1:19,4:23:65.26:184,0,65	0/0:17,0:16:14.68:0,15,157	0/1:12,0:11:33.85:34,0,42
chr10	31991141	.	ATT	A	6340.76	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=14.995;DP=708;FS=1.427;HRun=7;HaplotypeScore=82.6663;InbreedingCoeff=0.9997;MQ=69.28;MQ0=1;MQRankSum=-0.112;QD=32.19;ReadPosRankSum=-0.314;VQSLOD=4.7708;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:69.23:0,69,1177	0/0:12,0:12:36.12:0,36,630	0/0:21,0:21:51.17:0,51,830	0/0:23,0:20:54.18:0,54,875	0/0:22,0:22:63.22:0,63,1096	0/0:32,0:32:87.26:0,87,1442	0/0:24,0:24:66.22:0,66,1129	1/1:7,30:37:90.24:1108,90,0	0/0:31,0:31:93.32:0,93,1626	0/0:26,0:27:78.27:0,78,1363	0/0:20,0:20:57.20:0,57,996	0/0:26,0:26:78.27:0,78,1364	0/0:25,0:25:66.22:0,66,1128	0/0:23,0:23:57.18:0,57,959	1/1:1,36:37:90.28:1147,90,0	0/0:25,0:25:69.23:0,69,1181	0/0:33,0:33:96.27:0,96,1588	0/0:11,0:11:30.09:0,30,496	1/1:3,17:19:45.14:573,45,0	1/1:1,30:31:81.32:1065,81,0	1/1:3,34:37:93.30:1185,93,0	0/0:21,0:21:63.22:0,63,1099	0/0:28,0:28:75.26:0,75,1312	0/0:25,0:25:75.26:0,75,1312	0/0:12,0:12:33.11:0,33,577	0/0:37,0:37:99:0,108,1840	1/1:2,33:35:99:1262,99,0	0/0:10,0:10:30.10:0,30,525
chr10	31991759	.	A	AC	1976.03	PASS	AB=0.794;AC=19;AF=0.339;AN=56;BaseQRankSum=8.710;DP=393;FS=22.315;HRun=1;HaplotypeScore=119.6003;InbreedingCoeff=-0.4902;MQ=51.84;MQ0=29;MQRankSum=-5.100;QD=7.11;ReadPosRankSum=0.967;VQSLOD=-0.5258;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:19:22.15:22,0,170	0/1:6,4:10:23.28:180,0,23	0/0:20,0:5:10.91:0,11,120	0/0:32,0:10:16.44:0,16,177	0/1:11,2:13:53.46:53,0,222	0/1:14,6:19:99:185,0,383	0/1:17,6:21:99:284,0,365	0/0:16,0:16:43.85:0,44,589	0/1:22,5:27:99:186,0,554	0/1:9,3:11:40.99:41,0,149	0/1:6,5:10:4.08:139,0,4	0/1:8,1:8:27.55:28,0,41	0/1:8,2:8:60.10:60,0,120	0/0:7,0:6:8.99:0,9,100	0/0:12,0:12:18.06:0,18,250	0/1:11,6:16:83.86:156,0,84	0/1:11,4:14:78.47:134,0,78	0/1:4,4:8:99:143,0,108	0/0:8,0:7:21.03:0,21,256	0/0:3,0:3:9.03:0,9,125	0/0:14,0:10:27.98:0,28,375	0/1:12,4:11:79.90:139,0,80	0/1:13,5:17:40.22:40,0,187	0/1:11,3:10:40.82:56,0,41	0/1:5,4:9:8.29:118,0,8	0/1:8,4:10:99:133,0,179	0/1:8,2:10:35.46:35,0,305	0/0:2,0:2:5.23:0,5,37
chr10	31991761	.	CAACAACA	C	1685.17	PASS	AB=0.918;AC=23;AF=0.426;AN=54;BaseQRankSum=3.501;DP=389;FS=10.621;HRun=0;HaplotypeScore=140.3212;InbreedingCoeff=-0.0969;MQ=51.59;MQ0=31;MQRankSum=-1.477;QD=6.29;ReadPosRankSum=-1.311;VQSLOD=1.8980;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:16,6:18:6.34:0,6,80	0/1:10,0:10:36.36:108,0,36	0/1:24,0:5:10.80:11,0,81	0/0:33,0:10:17.04:0,17,150	0/1:15,0:15:65.78:91,0,66	0/1:21,0:20:82.11:166,0,82	0/1:23,0:21:99:197,0,126	0/0:13,0:13:27.01:0,27,698	0/1:27,0:27:99:168,0,310	0/1:7,5:11:0.17:102,0,0	0/1:11,0:10:11.72:88,0,12	0/0:6,1:6:5.86:0,6,61	1/1:8,0:7:13.53:147,14,0	./.	0/0:12,0:12:17.09:0,17,422	0/1:11,5:16:46.05:136,0,46	0/1:10,5:14:20.35:86,0,20	1/1:7,0:7:17.74:117,18,0	0/1:7,0:6:10.82:11,0,334	0/0:3,0:3:9.03:0,9,203	0/0:13,0:9:21.96:0,22,637	0/1:15,0:10:42.62:43,0,54	0/1:14,1:17:49.53:50,0,118	1/1:13,1:10:4.59:82,5,0	0/1:4,4:8:0.29:48,0,0	1/1:11,0:10:16.59:189,17,0	0/0:11,0:10:27.94:0,28,888	0/1:2,0:2:13.25:13,0,18
chr10	31991762	.	A	AC	3565.78	PASS	AB=0.722;AC=30;AF=0.556;AN=54;BaseQRankSum=9.078;DP=385;FS=12.683;HRun=1;HaplotypeScore=114.4766;InbreedingCoeff=0.0090;MQ=51.67;MQ0=31;MQRankSum=-2.608;QD=12.92;ReadPosRankSum=2.441;VQSLOD=1.5101;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:13,9:17:50.49:50,0,75	1/1:4,6:10:21.06:258,21,0	0/0:26,0:5:6.90:0,7,73	0/0:33,0:10:19.77:0,20,238	0/1:8,5:14:99:117,0,110	0/1:13,8:20:99:199,0,179	0/1:11,10:19:99:289,0,183	0/0:15,0:15:18.67:0,19,466	0/1:18,9:27:99:233,0,227	0/1:7,4:10:64.71:161,0,65	1/1:4,7:10:20.91:220,21,0	1/1:1,4:5:9.02:102,9,0	1/1:1,7:6:15.01:185,15,0	./.	0/0:12,0:12:9.56:0,10,121	1/1:6,10:15:27.07:327,27,0	0/1:9,7:15:25.06:204,0,25	0/1:3,4:7:62.47:168,0,62	0/1:6,1:6:18.13:18,0,191	0/0:3,0:3:9.03:0,9,125	0/0:13,0:9:15.03:0,15,285	1/1:1,14:10:21.06:264,21,0	0/1:8,8:14:22.10:165,0,22	1/1:6,10:12:1.51:109,2,0	1/1:4,4:8:11.63:133,12,0	0/1:5,6:10:47.23:221,0,47	0/1:9,2:10:66.85:67,0,302	1/1:0,2:2:6.02:77,6,0
chr10	31991764	.	CAACA	C	2518.15	PASS	AB=0.950;AC=35;AF=0.648;AN=54;BaseQRankSum=2.582;DP=391;FS=3.425;HRun=0;HaplotypeScore=125.5505;InbreedingCoeff=0.3472;MQ=51.20;MQ0=33;MQRankSum=-0.838;QD=8.34;ReadPosRankSum=0.153;VQSLOD=2.9749;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:16,1:17:1.91:2,0,19	1/1:7,3:10:11.28:138,11,0	0/1:27,0:5:0.89:1,0,73	0/0:34,0:10:16.41:0,16,150	1/1:16,0:16:8.34:309,8,0	1/1:20,1:20:20.62:413,21,0	1/1:19,1:19:2.19:358,2,0	0/0:12,0:14:5.71:0,6,371	1/1:26,2:28:26.99:519,27,0	1/1:11,0:10:7.79:44,8,0	0/1:11,0:9:0.27:55,0,0	0/1:6,0:5:4.43:10,0,4	1/1:4,0:6:14.92:115,15,0	./.	0/0:12,0:12:16.87:0,17,223	1/1:15,0:15:13.43:130,13,0	1/1:14,0:15:11.47:127,11,0	1/1:8,0:8:11.80:75,12,0	0/1:8,0:6:10.82:11,0,220	0/1:5,0:5:28.98:29,0,130	0/0:12,0:9:13.72:0,14,401	0/1:13,0:10:1.57:65,0,2	0/1:14,1:14:17.98:18,0,26	1/1:13,0:12:5.68:48,6,0	0/1:8,0:8:0.29:48,0,0	1/1:9,1:9:17.46:141,17,0	0/0:11,0:10:19.87:0,20,570	1/1:2,0:2:3.48:32,3,0
chr10	31991765	.	A	AC	4072.60	PASS	AB=0.783;AC=37;AF=0.661;AN=56;BaseQRankSum=7.519;DP=392;FS=1.839;HRun=1;HaplotypeScore=112.6754;InbreedingCoeff=0.1904;MQ=51.03;MQ0=33;MQRankSum=-1.160;QD=13.49;ReadPosRankSum=3.980;VQSLOD=3.1378;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:16,6:17:3.26:75,0,3	1/1:3,7:10:21.07:265,21,0	0/0:28,0:5:11.89:0,12,118	0/0:35,0:10:5.65:0,6,186	1/1:8,8:16:22.66:335,23,0	1/1:7,13:19:27.13:384,27,0	0/1:7,15:20:2.78:381,0,3	0/0:14,0:14:18.74:0,19,436	1/1:13,14:27:50.53:695,51,0	0/1:8,4:11:65.74:82,0,66	1/1:5,7:10:19.78:183,20,0	1/1:1,5:5:9.02:97,9,0	1/1:5,3:6:4.92:108,5,0	0/1:4,2:5:0:0,0,0	0/1:12,0:12:0.57:1,0,23	1/1:6,10:15:25.88:278,26,0	0/1:10,6:15:0.57:193,0,1	0/1:3,4:7:65.64:133,0,66	0/1:8,1:7:26.65:27,0,190	0/1:5,0:5:25.24:25,0,108	0/0:13,0:9:14.77:0,15,263	1/1:8,8:10:10.26:232,10,0	1/1:5,9:12:14.46:122,14,0	1/1:9,6:11:2.18:60,2,0	1/1:4,4:8:11.63:125,12,0	0/1:4,6:9:30.84:176,0,31	0/1:9,2:10:29.92:30,0,340	1/1:0,2:2:6.01:66,6,0
chr10	31991767	.	CA	C	2607.71	PASS	AB=0.848;AC=44;AF=0.786;AN=56;BaseQRankSum=6.149;DP=391;FS=9.828;HRun=2;HaplotypeScore=117.2814;InbreedingCoeff=0.3835;MQ=51.08;MQ0=32;MQRankSum=-2.036;QD=8.25;ReadPosRankSum=5.550;VQSLOD=0.4731;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:18,4:17:10.26:45,0,10	1/1:5,5:10:20.45:168,20,0	0/0:28,0:5:8.61:0,9,82	0/0:34,0:10:18.56:0,19,153	1/1:12,4:16:25.76:243,26,0	1/1:14,6:19:36.26:308,36,0	1/1:15,6:19:39.59:303,40,0	0/1:11,2:13:0.36:0,0,142	1/1:19,7:26:59.35:444,59,0	1/1:11,1:11:8.26:57,8,0	1/1:11,2:11:12.79:94,13,0	1/1:5,1:5:6.72:33,7,0	1/1:4,5:7:18:174,18,0	1/1:3,3:5:3.01:37,3,0	1/1:12,0:12:0.61:2,1,0	1/1:14,2:15:24.93:152,25,0	1/1:13,3:15:19.39:144,19,0	1/1:7,0:7:11.80:77,12,0	0/1:7,2:7:10.78:11,0,108	0/1:4,1:5:27.94:32,0,28	0/0:12,1:9:10.67:0,11,190	1/1:11,5:10:20.95:128,21,0	0/1:12,2:12:3.41:24,0,3	1/1:13,3:12:4.44:36,4,0	1/1:8,0:8:5.05:63,5,0	1/1:8,2:9:18.79:140,19,0	0/1:9,2:10:1.52:2,0,257	1/1:1,1:2:5.81:48,6,0
chr10	31991768	.	A	AC	7032.22	PASS	AB=0.968;AC=46;AF=0.821;AN=56;BaseQRankSum=6.722;DP=522;FS=1.415;HRun=1;HaplotypeScore=182.4494;InbreedingCoeff=0.1976;MQ=47.10;MQ0=30;MQRankSum=-2.340;QD=15.32;ReadPosRankSum=4.145;VQSLOD=5.1599;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:22,3:23:24.50:131,0,24	1/1:8,0:10:21.07:282,21,0	0/0:29,0:6:8.45:0,8,83	0/0:34,0:11:20.41:0,20,190	1/1:14,3:18:33.32:375,33,0	1/1:17,6:23:37.06:411,37,0	1/1:12,9:21:42.65:482,43,0	0/1:21,0:19:99:225,0,129	1/1:21,3:29:61:766,61,0	1/1:18,3:19:32.58:427,33,0	1/1:13,7:18:20.38:243,20,0	1/1:9,3:11:12.03:146,12,0	1/1:13,2:13:29.89:396,30,0	1/1:11,2:12:5.85:81,6,0	1/1:3,0:19:13.27:132,13,0	1/1:11,6:19:27.07:334,27,0	1/1:17,4:20:35.35:450,35,0	1/1:8,4:12:21.93:281,22,0	0/1:19,0:16:84.20:342,0,84	0/1:9,0:8:27.89:80,0,28	0/1:15,0:10:26.43:26,0,179	1/1:16,4:16:22.34:282,22,0	1/1:9,5:14:11.82:148,12,0	1/1:18,6:19:4.28:73,4,0	1/1:5,4:9:11.63:139,12,0	1/1:12,4:15:34.33:449,34,0	0/1:17,0:16:99:198,0,240	1/1:3,0:4:12.02:133,12,0
chr10	31992839	.	CCTT	C	4750.61	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=12.789;DP=708;FS=2.391;HRun=0;HaplotypeScore=98.1801;InbreedingCoeff=0.9997;MQ=89.55;MQ0=0;MQRankSum=-3.096;QD=44.40;ReadPosRankSum=3.536;VQSLOD=6.6910;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,123,2617	1/1:0,15:15:42.14:716,42,0	0/0:31,0:31:87.30:0,87,1991	0/0:23,0:23:66.22:0,66,1418	1/1:0,29:29:81.28:1375,81,0	1/1:2,24:26:66.23:1125,66,0	1/1:0,14:14:39.13:665,39,0	0/0:34,0:34:93.32:0,93,2149	1/1:2,21:23:51.17:869,51,0	0/0:31,0:31:87.30:0,87,1987	0/0:25,0:25:75.26:0,75,1729	0/0:29,0:29:84.29:0,84,1936	0/0:28,0:28:84.26:0,84,1890	0/0:17,0:17:51.14:0,51,1109	0/0:32,0:32:96.33:0,96,2212	0/0:21,0:21:63.19:0,63,1366	0/0:28,0:28:78.27:0,78,1779	0/0:11,0:11:33.06:0,33,711	0/0:30,0:30:90.31:0,90,2012	0/0:31,0:31:93.32:0,93,2138	0/0:38,0:38:99:0,111,2560	0/0:22,0:22:66.21:0,66,1468	0/0:24,0:24:72.25:0,72,1639	0/0:31,0:31:90.31:0,90,2076	0/0:23,0:23:69.24:0,69,1590	0/0:17,0:17:51.18:0,51,1176	0/0:23,0:23:69.24:0,69,1588	0/0:9,0:9:27.09:0,27,623
chr10	31994132	.	TTG	T	2344.98	PASS	AB=0.978;AC=29;AF=0.518;AN=56;BaseQRankSum=9.819;DP=483;FS=0.756;HRun=0;HaplotypeScore=127.9485;InbreedingCoeff=0.1628;MQ=73.00;MQ0=4;MQRankSum=-10.507;QD=7.79;ReadPosRankSum=5.001;VQSLOD=3.1557;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:19,1:20:39.77:178,0,40	0/0:10,0:10:24.20:0,24,210	0/0:44,0:27:41.85:0,42,531	0/0:31,0:19:8.35:0,8,184	0/0:27,0:27:74.50:0,74,745	0/0:23,0:23:68.97:0,69,644	0/0:8,0:8:21.02:0,21,211	0/1:22,0:22:83.59:84,0,111	0/0:20,0:20:45.76:0,46,424	0/1:16,0:16:34.25:182,0,34	1/1:19,1:19:2.80:197,3,0	1/1:13,0:13:33.37:167,33,0	1/1:11,0:11:24.89:131,25,0	1/1:14,1:15:4.08:116,4,0	0/0:19,0:18:51.03:0,51,475	1/1:16,0:16:41.54:199,42,0	0/1:10,1:11:33.32:33,0,103	0/1:6,0:5:11.96:28,0,12	0/1:14,2:16:76.26:76,0,122	1/1:25,0:24:14.64:226,15,0	0/1:5,0:5:15.04:20,0,15	0/1:17,0:16:5.78:167,0,6	0/1:7,0:7:6.76:63,0,7	0/1:6,0:6:18:18,0,18	1/1:17,1:18:45.83:256,46,0	0/1:22,0:22:44.55:94,0,45	1/1:27,0:27:2.75:252,3,0	1/1:8,0:8:10.33:46,10,0
chr10	31994134	.	GTT	G	6946.93	PASS	AB=0.614;AC=37;AF=0.661;AN=56;BaseQRankSum=0.477;DP=491;FS=7.025;HRun=11;HaplotypeScore=117.0991;InbreedingCoeff=0.8028;MQ=72.34;MQ0=4;MQRankSum=-7.609;QD=23.16;ReadPosRankSum=0.081;VQSLOD=3.8523;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:9,11:20:35.46:433,35,0	0/0:3,0:10:18.01:0,18,188	0/0:47,0:29:7.63:0,8,189	0/0:31,0:19:15.06:0,15,128	0/0:6,0:29:73.03:0,73,674	0/0:5,0:23:57.10:0,57,563	0/0:3,0:9:18:0,18,180	1/1:11,11:22:28.44:446,28,0	0/0:16,0:22:42.82:0,43,399	1/1:8,8:16:36.54:376,37,0	1/1:7,14:20:51.09:530,51,0	1/1:3,10:13:39.08:404,39,0	1/1:2,8:10:27.06:285,27,0	1/1:5,7:12:27.07:285,27,0	0/0:9,0:18:42.93:0,43,415	1/1:4,13:17:47.85:509,48,0	0/1:7,2:11:3.09:81,0,3	1/1:5,2:6:14.66:125,15,0	1/1:9,7:16:27.02:275,27,0	1/1:6,19:24:66.09:688,66,0	1/1:2,3:5:6.01:63,6,0	1/1:6,11:16:40.90:387,41,0	1/1:3,3:6:14.90:143,15,0	0/1:1,4:6:0.08:53,0,0	1/1:8,10:18:51.12:533,51,0	1/1:8,14:22:37.89:520,38,0	1/1:8,18:27:70.36:726,70,0	0/1:2,7:9:4.80:86,0,5
chr10	31994158	.	TG	T	5286.43	PASS	AC=38;AF=0.704;AN=54;BaseQRankSum=3.651;DP=429;FS=10.988;HRun=2;HaplotypeScore=125.5721;InbreedingCoeff=0.9627;MQ=61.18;MQ0=5;MQRankSum=-8.544;QD=20.02;ReadPosRankSum=0.424;VQSLOD=3.6692;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,7:14:35.82:351,36,0	0/0:5,0:5:12.82:0,13,132	0/0:34,0:18:31.03:0,31,363	0/0:24,0:15:28.94:0,29,301	0/0:32,0:32:95.10:0,95,1208	0/0:20,0:20:56.93:0,57,702	0/0:9,0:9:11.87:0,12,147	1/1:23,0:23:39.40:192,39,0	0/0:19,0:19:29.95:0,30,333	1/1:1,10:16:40.70:397,41,0	1/1:9,10:22:51.39:556,51,0	1/1:1,10:12:35.56:410,36,0	1/1:2,5:8:23.96:255,24,0	1/1:3,3:9:22.67:190,23,0	0/0:16,0:15:15.02:0,15,95	1/1:4,8:17:49.60:457,50,0	1/1:3,3:8:23.25:204,23,0	1/1:3,4:8:20.11:213,20,0	1/1:14,0:14:22.24:109,22,0	1/1:23,0:22:43.62:199,44,0	./.	1/1:1,6:13:38.78:372,39,0	1/1:3,4:8:17.42:197,17,0	1/1:3,4:7:9.03:115,9,0	1/1:3,12:15:28.36:446,28,0	1/1:6,6:16:32.01:341,32,0	1/1:22,0:24:40.73:224,41,0	1/1:2,1:4:8.82:58,9,0
chr10	31994159	.	G	GT	1823.40	PASS	AB=1.000;AC=9;AF=0.167;AN=54;BaseQRankSum=-4.054;DP=426;FS=11.514;HRun=5;HaplotypeScore=136.4648;InbreedingCoeff=0.6823;MQ=62.80;MQ0=5;MQRankSum=-3.521;QD=19.61;ReadPosRankSum=-0.809;VQSLOD=1.9896;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:11.17:0,11,27	0/0:5,0:5:7.15:0,7,154	0/0:35,0:18:38.13:0,38,418	0/0:29,0:18:31.15:0,31,310	0/0:32,0:32:96.27:0,96,1266	0/0:20,0:20:57.19:0,57,775	0/0:8,0:8:12.02:0,12,150	1/1:11,12:22:47.22:506,47,0	0/0:16,0:16:30.06:0,30,387	0/0:16,0:16:22.87:0,23,79	0/0:22,0:22:11.21:0,11,58	0/0:12,0:12:17.72:0,18,47	0/1:8,0:8:11.29:16,0,11	0/0:9,0:9:11.12:0,11,31	0/0:16,0:15:15.34:0,15,146	0/0:17,0:17:19.10:0,19,51	0/0:8,0:8:4.72:0,5,15	0/0:9,0:8:3.28:0,3,12	1/1:5,10:15:30.52:337,31,0	1/1:7,16:22:51.59:574,52,0	./.	0/0:14,0:13:17.62:0,18,50	0/0:8,0:8:8.32:0,8,22	0/0:7,0:7:4.34:0,4,11	0/0:14,0:14:6.51:0,7,46	0/0:16,0:16:21.94:0,22,66	1/1:10,14:24:47.30:549,47,0	0/0:4,0:4:0.45:0,0,3
chr10	31994189	.	A	ATT	3143.58	PASS	AB=1.000;AC=23;AF=0.442;AN=52;BaseQRankSum=0.867;DP=333;FS=8.622;HRun=6;HaplotypeScore=124.2676;InbreedingCoeff=0.6754;MQ=66.76;MQ0=6;MQRankSum=-2.852;QD=19.77;ReadPosRankSum=-0.140;VQSLOD=0.8803;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:8:2.99:0,3,34	1/1:5,0:5:11.63:147,12,0	0/0:30,0:24:51.08:0,51,573	0/0:20,0:13:31.66:0,32,313	1/1:21,1:22:57.48:754,57,0	1/1:17,1:18:39.14:513,39,0	1/1:5,0:5:3.01:39,3,0	1/1:16,0:16:30.09:452,30,0	1/1:13,0:13:17.85:217,18,0	0/0:13,0:12:24.06:0,24,278	0/0:19,0:19:8.99:0,9,109	0/1:9,0:9:0:0,0,0	0/0:6,0:6:5.61:0,6,19	0/0:10,0:10:5.21:0,5,41	1/1:14,0:14:15.89:193,16,0	0/0:13,1:14:11.35:0,11,107	0/0:9,0:8:4.13:0,4,73	0/1:9,0:8:6.79:7,0,23	1/1:8,3:11:20.66:301,21,0	1/1:11,3:14:23.71:236,24,0	./.	0/1:8,0:8:11.97:12,0,30	0/0:10,0:9:12:0,12,129	0/0:10,0:10:5.34:0,5,45	0/0:11,0:11:8.96:0,9,93	0/0:12,0:12:26.45:0,26,259	1/1:12,2:15:35.90:462,36,0	./.
chr10	31994195	.	T	TACACACACAC	8397.73	PASS	AB=0.822;AC=48;AF=0.923;AN=52;BaseQRankSum=-1.662;DP=437;FS=2.011;HRun=0;HaplotypeScore=190.0773;InbreedingCoeff=0.0162;MQ=56.26;MQ0=8;MQRankSum=-0.700;QD=20.48;ReadPosRankSum=2.175;VQSLOD=4.3018;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:11,0:10:0:0,0,0	1/1:5,0:7:10.25:112,10,0	1/1:27,0:20:2.22:7,2,0	./.	0/1:17,0:26:15.99:218,0,16	1/1:12,0:18:2.83:274,3,0	1/1:2,0:13:5.91:61,6,0	1/1:21,0:20:24.07:541,24,0	1/1:1,0:14:11.46:79,11,0	1/1:16,0:15:24.08:494,24,0	1/1:12,9:23:9.03:274,9,0	0/1:13,0:13:27.94:217,0,28	1/1:4,3:8:18.06:813,18,0	1/1:10,5:16:15.05:600,15,0	0/1:2,0:12:20.79:42,0,21	1/1:13,0:18:15.05:493,15,0	1/1:11,2:13:15.05:367,15,0	1/1:8,1:10:15.05:460,15,0	1/1:8,0:10:17.38:413,17,0	1/1:13,0:21:8.79:192,9,0	1/1:8,0:8:3:25,3,0	1/1:11,0:11:2.76:25,3,0	1/1:9,5:15:12.04:355,12,0	1/1:7,1:13:9.03:354,9,0	1/1:14,1:15:12.04:269,12,0	1/1:15,5:23:27.08:854,27,0	1/1:22,0:24:32.87:860,33,0	./.
chr10	31994349	.	C	CA	9523.46	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=14.397;DP=533;FS=7.672;HRun=0;HaplotypeScore=87.8981;InbreedingCoeff=0.9937;MQ=76.26;MQ0=0;MQRankSum=-4.966;QD=39.03;ReadPosRankSum=4.766;VQSLOD=5.0487;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,24:24:60.20:900,60,0	0/0:10,0:10:30.09:0,30,402	0/0:19,0:19:55.69:0,56,709	0/0:19,0:19:47.11:0,47,649	0/0:18,0:18:51.17:0,51,707	0/0:21,0:21:63.21:0,63,876	0/0:25,0:25:75.21:0,75,1024	0/0:37,0:37:99:0,102,1404	0/0:19,0:19:51:0,51,681	1/1:0,16:16:48.16:720,48,0	1/1:2,6:8:21.01:260,21,0	1/1:0,18:18:48.16:707,48,0	1/1:0,16:16:35.83:510,36,0	1/1:0,22:22:57.19:856,57,0	0/0:17,0:17:48.16:0,48,662	1/1:1,18:19:15.32:766,15,0	1/1:0,17:17:48.16:727,48,0	1/1:0,15:15:39.13:587,39,0	0/0:27,0:27:69.18:0,69,937	0/0:24,0:24:69.22:0,69,945	0/0:36,0:36:99:0,99,1361	1/1:0,8:8:24.08:357,24,0	1/1:0,6:6:17.99:238,18,0	1/1:1,31:32:78.26:1178,78,0	1/1:0,22:23:57.16:813,57,0	1/1:0,15:15:45.15:678,45,0	0/0:17,0:16:48.16:0,48,668	1/1:0,5:5:15.05:227,15,0
chr10	31996140	.	A	AT	10460.93	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=1.137;DP=580;FS=0.000;HRun=7;HaplotypeScore=97.9210;InbreedingCoeff=0.9969;MQ=75.86;MQ0=0;MQRankSum=-1.738;QD=31.23;ReadPosRankSum=2.655;VQSLOD=4.2597;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,36:39:99:1305,108,0	0/0:5,0:5:15.02:0,15,145	0/0:13,0:13:24.02:0,24,230	0/0:10,0:10:20.86:0,21,202	0/0:26,0:26:60.09:0,60,579	0/0:20,0:20:51.08:0,51,492	0/0:13,0:13:36.06:0,36,348	0/0:24,0:24:54.07:0,54,522	0/0:18,0:18:51.08:0,51,492	1/1:3,23:27:72.22:868,72,0	1/1:2,20:22:57.17:689,57,0	1/1:1,22:23:57.17:688,57,0	1/1:4,23:27:66.20:796,66,0	1/1:2,22:24:66.16:781,66,0	0/0:20,0:19:54.07:0,54,516	1/1:2,17:19:45.14:544,45,0	1/1:3,18:21:51.16:616,51,0	1/1:0,12:12:36.11:435,36,0	0/0:27,0:27:72.10:0,72,690	0/0:24,0:24:63.10:0,63,608	0/0:17,0:17:51.08:0,51,492	1/1:5,25:30:69.17:817,69,0	1/1:0,17:17:45.14:544,45,0	1/1:2,13:15:33.10:399,33,0	1/1:2,21:23:60.18:725,60,0	1/1:0,22:22:66.18:784,66,0	0/0:28,0:28:72.08:0,72,679	1/1:1,13:14:39.12:471,39,0
chr10	31996492	.	GCCACTTGCC	G	7901.34	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=14.299;DP=681;FS=0.877;HRun=0;HaplotypeScore=184.6618;InbreedingCoeff=0.9963;MQ=78.40;MQ0=0;MQRankSum=-14.030;QD=62.71;ReadPosRankSum=1.546;VQSLOD=4.9324;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,157,7281	1/1:1,8:9:24.08:740,24,0	0/0:23,0:23:66.23:0,66,2897	0/0:30,0:30:81.01:0,81,3531	1/1:3,22:25:57.11:1591,57,0	1/1:4,24:28:63.22:1951,63,0	1/1:2,18:20:39.13:1205,39,0	0/0:30,0:30:81.28:0,81,3501	1/1:0,19:19:39.13:1206,39,0	0/0:37,0:37:99:0,102,4860	0/0:23,0:23:69.24:0,69,3081	0/0:19,0:19:57.20:0,57,2757	0/0:27,0:27:78.25:0,78,3514	0/0:23,0:23:69.24:0,69,3361	1/1:4,21:25:39.08:1209,39,0	0/0:19,0:19:57.18:0,57,2673	0/0:26,0:26:78.27:0,78,3659	0/0:27,0:27:81.28:0,81,3830	0/0:20,0:20:60.21:0,60,2795	0/0:28,0:28:81.26:0,81,3749	0/0:32,0:32:90.31:0,90,4259	0/0:25,0:25:69.24:0,69,3012	0/0:26,0:26:78.27:0,78,3625	0/0:18,0:18:54.19:0,54,2363	0/0:22,0:22:66.23:0,66,2982	0/0:21,0:21:60.18:0,60,2615	0/0:21,0:21:60.21:0,60,2754	0/0:5,0:5:15.05:0,15,735
chr10	31997125	.	AAAG	A	4557.28	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=13.359;DP=437;FS=2.396;HRun=0;HaplotypeScore=132.8036;InbreedingCoeff=0.9670;MQ=69.38;MQ0=3;MQRankSum=-13.218;QD=21.81;ReadPosRankSum=3.778;VQSLOD=4.8287;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,11:11:28.89:320,29,0	0/0:9,0:9:27.09:0,27,613	0/0:25,0:16:35.77:0,36,561	0/0:27,0:18:35.78:0,36,574	0/0:18,0:18:51.16:0,51,1073	0/0:15,0:15:42.14:0,42,945	0/0:23,0:23:69.22:0,69,1500	0/0:8,0:8:21.07:0,21,476	0/0:14,0:14:42.14:0,42,936	1/1:7,17:24:51.14:640,51,0	1/1:4,3:7:8.86:84,9,0	1/1:6,12:18:39.04:398,39,0	1/1:4,13:17:42.01:432,42,0	1/1:10,12:22:42.06:456,42,0	0/0:19,0:19:57.20:0,57,1282	1/1:10,10:20:27.08:327,27,0	1/1:8,5:13:16.26:166,16,0	1/1:0,11:11:33.11:430,33,0	0/0:13,0:13:39.13:0,39,838	0/0:12,0:12:36.11:0,36,751	0/0:19,0:18:57.20:0,57,1280	1/1:7,6:13:15.04:159,15,0	1/1:4,12:16:33.95:400,34,0	1/1:2,4:6:11.99:148,12,0	1/1:6,10:15:27.08:304,27,0	1/1:2,6:8:18.05:216,18,0	0/0:26,0:26:75.26:0,75,1704	1/1:4,2:5:6.02:78,6,0
chr10	31997131	.	A	ATCCCTT	13379.08	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=13.898;DP=414;FS=1.273;HRun=0;HaplotypeScore=141.7493;InbreedingCoeff=0.9825;MQ=73.11;MQ0=3;MQRankSum=-15.008;QD=76.45;ReadPosRankSum=3.415;VQSLOD=5.9947;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,9:11:33.11:934,33,0	0/0:9,0:9:27.09:0,27,665	0/0:29,0:18:32.37:0,32,523	0/0:33,0:23:38.04:0,38,825	0/0:16,0:16:48.14:0,48,1079	0/0:15,0:15:45.15:0,45,1093	0/0:22,0:22:63.20:0,63,1443	0/0:11,0:11:27.08:0,27,587	0/0:17,0:17:51.14:0,51,1131	1/1:7,13:20:48.05:1391,48,0	1/1:2,3:5:12.04:290,12,0	1/1:4,12:16:42.14:1236,42,0	1/1:3,12:15:45.15:1326,45,0	1/1:1,12:13:36.12:1076,36,0	0/0:19,0:19:54.13:0,54,1112	1/1:6,9:16:39.11:1069,39,0	1/1:6,5:11:27.09:815,27,0	1/1:1,11:12:36.12:1130,36,0	0/0:12,0:12:33.11:0,33,807	0/0:10,0:10:30.09:0,30,690	0/0:19,0:18:57.13:0,57,1348	1/1:1,5:6:15.05:447,15,0	1/1:7,12:19:54.14:1406,54,0	1/1:4,4:8:15.01:275,15,0	1/1:0,10:9:27.09:822,27,0	1/1:3,6:9:27.09:873,27,0	0/0:26,0:26:78.25:0,78,1820	1/1:1,2:3:9.03:288,9,0
chr10	31997845	.	A	AG	13378.10	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-15.429;DP=673;FS=2.409;HRun=2;HaplotypeScore=62.5998;InbreedingCoeff=0.9996;MQ=80.03;MQ0=0;MQRankSum=-4.941;QD=39.12;ReadPosRankSum=6.058;VQSLOD=4.8623;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,33:34:96.32:1382,96,0	0/0:8,0:8:24.06:0,24,285	0/0:26,0:26:66.10:0,66,793	0/0:31,0:31:91.80:0,92,1074	0/0:30,0:30:84.25:0,84,1041	0/0:25,0:25:72.21:0,72,878	0/0:19,0:19:57.18:0,57,707	0/0:33,0:33:90.27:0,90,1095	0/0:30,0:30:87.27:0,87,1078	1/1:2,24:26:72.24:1036,72,0	1/1:1,18:19:54.18:777,54,0	1/1:0,20:20:57.19:818,57,0	1/1:1,23:24:57.19:819,57,0	1/1:0,28:28:72.24:1037,72,0	0/0:23,0:23:66.21:0,66,818	1/1:1,19:20:50.96:734,51,0	1/1:3,35:38:99:1469,102,0	1/1:1,13:14:39.13:562,39,0	0/0:25,0:25:75.23:0,75,919	0/0:32,0:32:87.26:0,87,1078	0/0:21,0:21:57.18:0,57,707	1/1:0,14:14:36.12:518,36,0	1/1:2,22:24:60.20:863,60,0	1/1:0,32:31:87.29:1252,87,0	1/1:0,16:16:48.16:686,48,0	1/1:0,24:24:72.24:1036,72,0	0/0:28,0:28:81.25:0,81,1004	1/1:0,9:9:27.09:389,27,0
chr10	31998631	.	GGTGTGTGT	G	6023.19	PASS	AB=0.913;AC=44;AF=0.815;AN=54;BaseQRankSum=3.900;DP=685;FS=11.006;HRun=0;HaplotypeScore=198.6683;InbreedingCoeff=0.4446;MQ=65.69;MQ0=11;MQRankSum=-1.746;QD=10.21;ReadPosRankSum=-0.575;VQSLOD=3.0529;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:31,16:48:0.97:242,1,0	1/1:7,1:9:6.02:131,6,0	0/1:26,0:16:0:0,0,0	0/0:36,0:21:5.69:0,6,70	1/1:11,12:23:2.97:20,3,0	1/1:15,4:20:6.02:114,6,0	1/1:17,7:24:8.86:158,9,0	0/0:15,0:14:3.48:0,3,63	1/1:6,15:21:33.07:769,33,0	1/1:16,5:24:14.94:279,15,0	1/1:10,11:23:2.84:56,3,0	1/1:10,16:25:33.45:693,33,0	1/1:16,12:28:27.09:597,27,0	1/1:17,14:29:21.46:421,21,0	1/1:10,0:25:29.81:457,30,0	1/1:12,15:28:26.88:620,27,0	0/0:16,6:22:0:0,0,0	0/0:19,0:19:15.02:0,15,313	1/1:12,0:18:6.02:113,6,0	1/1:17,0:30:12.04:221,12,0	1/1:28,0:33:3.48:56,3,0	1/1:21,3:24:9.03:197,9,0	1/1:10,13:23:8.68:110,9,0	1/1:22,9:31:3.39:76,3,0	1/1:19,11:29:8.82:170,9,0	0/1:15,4:19:4.98:148,0,5	1/1:11,0:22:21.07:375,21,0	./.
chr10	31999276	.	AG	A	7525.53	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=20.773;DP=616;FS=11.551;HRun=1;HaplotypeScore=136.6750;InbreedingCoeff=0.9993;MQ=87.25;MQ0=0;MQRankSum=-6.526;QD=24.28;ReadPosRankSum=4.601;VQSLOD=3.6345;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,24:28:68.90:597,69,0	0/0:12,0:12:36.11:0,36,549	0/0:30,0:30:87.22:0,87,1309	0/0:17,0:17:42.11:0,42,604	0/0:23,0:23:69.22:0,69,1079	0/0:24,0:24:69.22:0,69,1075	0/0:11,0:11:33.10:0,33,499	0/0:31,0:31:93.30:0,93,1442	0/0:23,0:23:69.22:0,69,1078	1/1:1,31:32:95.84:844,96,0	1/1:2,21:23:62.92:553,63,0	1/1:0,23:23:68.82:586,69,0	1/1:0,22:22:63:569,63,0	1/1:0,24:24:71.99:651,72,0	0/0:23,0:23:69.24:0,69,1099	1/1:1,15:16:47.99:435,48,0	1/1:2,17:19:47.98:432,48,0	1/1:0,13:13:38.97:338,39,0	0/0:28,0:28:84.27:0,84,1292	0/0:33,0:33:99:0,99,1557	0/0:22,0:22:66.23:0,66,1051	1/1:0,24:24:59.84:501,60,0	1/1:0,22:22:59.89:518,60,0	1/1:0,17:19:46.50:395,46,0	1/1:1,15:16:44.92:392,45,0	1/1:1,20:21:62.99:570,63,0	0/0:29,0:29:87.28:0,87,1363	1/1:2,6:8:20.30:145,20,0
chr10	31999278	.	TTG	T	9635.92	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=20.648;DP=613;FS=8.540;HRun=0;HaplotypeScore=140.6228;InbreedingCoeff=0.9977;MQ=86.79;MQ0=0;MQRankSum=-5.421;QD=31.39;ReadPosRankSum=4.262;VQSLOD=6.3375;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,23:27:69.02:725,69,0	0/0:11,0:11:33.10:0,33,637	0/0:30,0:30:84.28:0,84,1597	0/0:16,0:16:45.05:0,45,828	0/0:23,0:23:69.24:0,69,1402	0/0:25,0:25:72.25:0,72,1445	0/0:11,0:11:33.09:0,33,633	0/0:33,0:33:99:0,99,1946	0/0:22,0:22:66.23:0,66,1341	1/1:0,31:31:93.22:1033,93,0	1/1:2,21:23:66.08:717,66,0	1/1:0,23:23:69.14:744,69,0	1/1:1,22:23:66.17:741,66,0	1/1:0,24:24:72.20:819,72,0	0/0:24,0:24:72.25:0,72,1446	1/1:1,15:16:48.13:547,48,0	1/1:1,17:18:45.12:514,45,0	1/1:1,13:14:42.11:474,42,0	0/0:27,0:27:81.27:0,81,1595	0/0:32,0:32:96.33:0,96,1950	0/0:22,0:22:66.23:0,66,1337	1/1:0,22:22:63.06:658,63,0	1/1:2,22:24:69.07:745,69,0	1/1:2,17:19:50.67:531,51,0	1/1:0,15:15:45.05:489,45,0	1/1:2,20:22:66.18:764,66,0	0/0:30,0:30:90.30:0,90,1772	1/1:0,6:6:14.98:135,15,0
chr10	31999856	.	A	ATT	9407.17	PASS	AB=0.579;AC=29;AF=0.518;AN=56;BaseQRankSum=-12.352;DP=555;FS=6.485;HRun=9;HaplotypeScore=60.9559;InbreedingCoeff=0.9282;MQ=80.34;MQ0=0;MQRankSum=-2.551;QD=34.59;ReadPosRankSum=2.048;VQSLOD=5.0159;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,27:29:66.22:1016,66,0	0/0:12,0:12:36.09:0,36,383	0/0:24,0:24:59.87:0,60,618	0/0:11,0:11:25.41:0,25,241	0/0:25,0:26:71.83:0,72,713	0/0:18,0:18:51.11:0,51,535	0/0:16,0:17:47.82:0,48,482	0/0:33,0:33:72.09:0,72,752	0/0:16,0:17:41.83:0,42,427	1/1:6,16:23:48.10:688,48,0	1/1:0,23:24:71.64:1018,72,0	1/1:1,21:22:57.19:878,57,0	1/1:5,12:18:30.10:461,30,0	1/1:1,13:16:38.10:525,38,0	0/0:17,0:17:48.12:0,48,511	0/1:3,8:11:10.86:256,0,11	1/1:3,17:20:45.15:693,45,0	1/1:0,7:7:18.06:276,18,0	0/0:30,0:30:75.14:0,75,798	0/0:26,0:26:66.11:0,66,695	0/0:23,0:23:60.13:0,60,638	1/1:1,14:16:38.96:495,39,0	1/1:1,14:15:39.13:600,39,0	1/1:2,21:25:60.19:889,60,0	1/1:0,14:15:41.63:609,42,0	1/1:2,21:24:62.65:863,63,0	0/0:29,0:29:78.18:0,78,822	1/1:6,1:7:12.01:141,12,0
chr10	32002129	.	CT	C	2120.08	PASS	AC=10;AF=0.385;AN=26;BaseQRankSum=5.742;DP=198;FS=4.688;HRun=8;HaplotypeScore=54.0078;InbreedingCoeff=0.9883;MQ=95.93;MQ0=0;MQRankSum=-1.296;QD=22.80;ReadPosRankSum=-0.854;VQSLOD=3.8749;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	0/0:6,0:6:15.05:0,15,181	0/0:11,0:11:19.72:0,20,268	0/0:9,0:10:15.63:0,16,194	0/0:26,0:26:63.19:0,63,761	0/0:14,0:14:42.13:0,42,507	0/0:15,0:15:39.12:0,39,469	1/1:4,17:21:48.07:463,48,0	0/0:10,0:10:24.07:0,24,290	./.	./.	./.	./.	./.	0/0:13,0:13:33.06:0,33,370	./.	./.	./.	1/1:1,16:17:48.08:462,48,0	1/1:4,17:21:48.07:463,48,0	1/1:0,15:15:42.07:405,42,0	./.	./.	./.	./.	./.	1/1:3,16:19:48.07:464,48,0	./.
chr10	32002183	.	TTCTC	T	788.86	PASS	AB=0.900;AC=18;AF=0.818;AN=22;DP=289;FS=0.000;HRun=0;HaplotypeScore=122.7793;InbreedingCoeff=0.3461;MQ=70.85;MQ0=19;QD=4.17;VQSLOD=1.8176;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	1/1:7,1:8:9.03:128,9,0	./.	0/0:44,0:19:0:0,0,0	1/1:18,2:20:9.50:134,10,0	1/1:17,0:16:5.67:61,6,0	0/1:9,2:12:0:0,0,0	0/1:33,0:30:0:0,0,0	1/1:12,3:17:12.38:172,12,0	./.	./.	./.	./.	./.	1/1:11,0:24:8.43:85,8,0	./.	./.	./.	1/1:18,1:18:5.86:90,6,0	1/1:21,3:25:2.35:37,2,0	./.	./.	./.	./.	./.	./.	1/1:11,1:10:12.03:153,12,0	./.
chr10	32002241	.	GCA	G	472.95	PASS	AB=0.909;AC=6;AF=0.231;AN=26;BaseQRankSum=-1.781;DP=258;FS=7.078;HRun=0;HaplotypeScore=91.4295;InbreedingCoeff=-0.0898;MQ=35.55;MQ0=27;MQRankSum=-1.545;QD=4.64;ReadPosRankSum=-3.838;VQSLOD=0.7623;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	0/0:7,0:6:4.65:0,5,32	0/0:24,0:1:2.99:0,3,24	0/0:21,0:2:3.01:0,3,46	0/0:18,0:17:9.78:0,10,135	0/1:27,0:25:20.52:21,0,191	0/0:18,0:17:12.03:0,12,134	0/1:20,3:18:99:258,0,274	0/0:14,0:14:8.36:0,8,106	./.	./.	./.	./.	./.	0/0:20,2:20:17.88:0,18,184	./.	./.	./.	0/1:14,2:15:47.98:48,0,129	0/0:16,3:18:2.33:0,2,12	1/1:17,0:12:5.59:83,6,0	./.	./.	./.	./.	./.	0/1:16,3:18:63.85:162,0,64	./.
chr10	32002243	.	A	ATG	1225.24	PASS	AB=0.730;AC=19;AF=0.731;AN=26;BaseQRankSum=-0.518;DP=267;FS=3.948;HRun=0;HaplotypeScore=89.9356;InbreedingCoeff=0.1188;MQ=36.33;MQ0=26;MQRankSum=1.285;QD=5.92;ReadPosRankSum=0.284;VQSLOD=2.9949;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	1/1:3,3:6:3.01:47,3,0	0/0:26,0:2:5.93:0,6,52	0/0:21,0:2:3.01:0,3,34	0/1:8,11:18:26.14:84,0,26	0/1:9,19:26:13.61:262,0,14	1/1:11,9:19:12.04:189,12,0	0/1:23,0:20:16.79:79,0,17	1/1:5,9:14:5.87:95,6,0	./.	./.	./.	./.	./.	1/1:12,9:19:12.04:189,12,0	./.	./.	./.	1/1:13,1:17:26.42:263,26,0	1/1:13,0:18:2.64:7,3,0	1/1:19,0:14:2.84:43,3,0	./.	./.	./.	./.	./.	1/1:14,0:19:8.79:72,9,0	./.
chr10	32002572	.	TA	T	2242.10	PASS	AC=10;AF=0.385;AN=26;BaseQRankSum=7.886;DP=235;FS=9.594;HRun=9;HaplotypeScore=54.9665;InbreedingCoeff=0.9670;MQ=80.66;MQ0=1;MQRankSum=-0.300;QD=19.50;ReadPosRankSum=-2.201;VQSLOD=2.7180;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	0/0:9,0:9:27.05:0,27,290	0/0:14,0:7:9.03:0,9,98	0/0:9,0:9:10.73:0,11,83	0/0:23,0:23:60.16:0,60,678	0/0:29,0:29:75.15:0,75,821	0/0:11,0:11:30.07:0,30,334	1/1:4,30:34:86.94:764,87,0	0/0:17,0:17:51.13:0,51,575	./.	./.	./.	./.	./.	0/0:8,0:8:24.07:0,24,275	./.	./.	./.	1/1:3,16:19:47.97:424,48,0	1/1:2,24:26:53.80:458,54,0	1/1:3,8:11:21.01:192,21,0	./.	./.	./.	./.	./.	1/1:3,22:25:31.59:541,32,0	./.
chr10	32002997	.	CT	C	6842.10	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=2.858;DP=596;FS=4.273;HRun=7;HaplotypeScore=88.9301;InbreedingCoeff=0.9981;MQ=79.84;MQ0=0;MQRankSum=-8.997;QD=25.25;ReadPosRankSum=2.854;VQSLOD=5.4353;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,13:17:36.08:367,36,0	0/0:9,0:9:24.05:0,24,286	0/0:18,0:18:42.13:0,42,516	0/0:18,0:17:18.27:0,18,297	0/0:43,0:43:99:0,120,1508	0/0:28,0:28:84.23:0,84,1027	0/0:18,0:18:51.16:0,51,639	0/0:6,0:33:62.93:0,63,352	0/0:18,0:18:54.15:0,54,655	1/1:2,23:25:66.13:666,66,0	1/1:2,22:24:54.12:550,54,0	1/1:1,10:11:27.06:275,27,0	1/1:2,8:10:24.05:245,24,0	1/1:0,14:14:36.08:367,36,0	0/0:25,0:25:75.21:0,75,918	1/1:2,12:14:33.07:336,33,0	1/1:0,22:22:57.13:581,57,0	1/1:1,14:15:39.09:398,39,0	0/0:3,0:23:42.21:0,42,240	0/0:4,0:27:65.38:0,65,337	0/0:1,0:16:34.09:0,34,174	1/1:0,18:18:42.09:428,42,0	1/1:1,18:19:48.11:489,48,0	1/1:2,15:17:45.10:459,45,0	1/1:0,21:21:51.11:519,51,0	1/1:0,28:28:75.16:763,75,0	0/0:1,0:49:99:0,128,652	1/1:0,16:15:39.09:398,39,0
chr10	32003181	.	T	TAGAA	19507.97	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=1.269;DP=684;FS=17.832;HRun=0;HaplotypeScore=146.6408;InbreedingCoeff=0.9987;MQ=73.83;MQ0=0;MQRankSum=-14.612;QD=59.48;ReadPosRankSum=1.178;VQSLOD=5.0854;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,12:20:42.07:974,42,0	0/0:12,0:12:33.11:0,33,607	0/0:23,0:23:57.18:0,57,968	0/0:10,0:10:24.04:0,24,372	0/0:37,0:37:99:0,108,1956	0/0:33,0:33:93.20:0,93,1552	0/0:18,0:18:48.15:0,48,852	0/0:32,0:32:81.27:0,81,1453	0/0:31,0:31:87.30:0,87,1589	1/1:6,20:26:63.20:1561,63,0	1/1:6,19:25:63.18:1506,63,0	1/1:3,12:14:39.07:902,39,0	1/1:4,13:17:45.12:1062,45,0	1/1:6,12:18:42.11:1040,42,0	0/0:23,0:23:63.20:0,63,1123	1/1:8,18:25:57.19:1414,57,0	1/1:4,12:16:39.13:1000,39,0	1/1:5,8:13:27.09:675,27,0	0/0:33,0:33:87.28:0,87,1560	0/0:30,0:30:78.27:0,78,1412	0/0:27,0:27:72.25:0,72,1324	1/1:6,26:32:75.17:1815,75,0	1/1:8,29:37:87.21:2029,87,0	1/1:1,8:9:24.08:619,24,0	1/1:6,23:29:78.18:1880,78,0	1/1:6,29:35:99:2481,99,0	0/0:47,0:47:99:0,141,2524	1/1:4,6:9:20.92:549,21,0
chr10	32003215	.	AT	A	5424.42	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=18.105;DP=583;FS=0.328;HRun=5;HaplotypeScore=158.4806;InbreedingCoeff=0.9783;MQ=62.70;MQ0=2;MQRankSum=-16.997;QD=22.89;ReadPosRankSum=-5.097;VQSLOD=1.8356;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,15:17:38.60:304,39,0	0/0:15,0:15:42.14:0,42,574	0/0:20,0:20:45.13:0,45,569	0/0:17,0:11:14.34:0,14,278	0/0:35,0:35:99:0,99,1320	0/0:28,0:28:75.16:0,75,981	0/0:22,0:22:63.12:0,63,820	0/0:23,0:23:63.16:0,63,776	0/0:32,0:32:90.28:0,90,1207	1/1:2,19:21:63.17:700,63,0	1/1:4,14:18:32.65:246,33,0	1/1:2,12:13:35.92:341,36,0	1/1:1,17:18:50.85:496,51,0	1/1:3,16:19:50.87:492,51,0	0/0:26,0:26:75.22:0,75,993	1/1:2,13:15:38.80:340,39,0	1/1:0,10:10:29.93:294,30,0	1/1:1,4:5:12.03:136,12,0	0/0:35,0:35:99:0,102,1372	0/0:22,0:22:60.20:0,60,819	0/0:29,0:29:81.27:0,81,1108	1/1:5,14:19:41.51:328,42,0	1/1:3,21:23:50.58:412,51,0	1/1:0,7:7:5.93:51,6,0	1/1:2,16:18:47.53:374,48,0	1/1:2,20:22:57.12:632,57,0	0/0:41,0:41:99:0,108,1397	1/1:0,10:9:27:278,27,0
chr10	32003246	.	A	ATG	6078.01	PASS	AB=0.625;AC=29;AF=0.518;AN=56;BaseQRankSum=15.430;DP=622;FS=8.881;HRun=0;HaplotypeScore=213.6354;InbreedingCoeff=0.8818;MQ=56.41;MQ0=4;MQRankSum=-15.613;QD=23.65;ReadPosRankSum=3.872;VQSLOD=4.3530;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,10:20:9.03:150,9,0	0/0:16,0:16:42.13:0,42,530	0/0:34,0:30:59.92:0,60,679	0/0:32,0:24:57:0,57,683	0/0:24,0:24:54.17:0,54,676	0/0:28,0:28:81.20:0,81,978	0/0:31,0:31:80.67:0,81,963	0/0:25,0:25:66.21:0,66,840	0/0:37,0:37:96.30:0,96,1198	1/1:8,8:16:30.10:498,30,0	1/1:4,7:11:9.03:149,9,0	1/1:6,17:23:36.12:596,36,0	0/1:10,15:25:28.18:646,0,28	1/1:4,17:21:39.13:640,39,0	0/0:21,0:21:51.16:0,51,649	1/1:3,16:19:30.10:497,30,0	1/1:9,10:19:33.08:506,33,0	1/1:5,7:12:7.13:272,7,0	0/0:26,0:26:57.18:0,57,726	0/0:23,0:23:48.09:0,48,590	0/0:32,0:32:87.24:0,87,1067	1/1:7,10:17:21.07:346,21,0	1/1:3,14:17:18.06:298,18,0	1/1:7,6:14:6.02:99,6,0	1/1:5,6:11:15.05:249,15,0	1/1:8,15:23:51.17:834,51,0	0/0:35,0:35:84.24:0,84,1040	1/1:0,8:7:18.06:298,18,0
chr10	32003276	.	CATGT	C	9405.45	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=17.359;DP=629;FS=0.708;HRun=0;HaplotypeScore=197.3952;InbreedingCoeff=0.9699;MQ=77.83;MQ0=1;MQRankSum=-17.353;QD=36.74;ReadPosRankSum=-3.089;VQSLOD=4.0316;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,21:26:44.75:797,45,0	0/0:16,0:16:42.14:0,42,1082	0/0:32,0:32:69.70:0,70,1652	0/0:31,0:30:75.20:0,75,1768	0/0:23,0:23:54.19:0,54,1368	0/0:30,0:30:75.26:0,75,1936	0/0:24,0:24:66.23:0,66,1703	0/0:35,0:35:84.29:0,84,2146	0/0:35,0:35:93.32:0,93,2350	1/1:4,7:11:24.08:427,24,0	1/1:4,7:11:21.05:373,21,0	1/1:6,19:25:54.19:960,54,0	1/1:5,23:28:66.21:1145,66,0	1/1:4,21:25:63.22:1119,63,0	0/0:26,0:26:69.24:0,69,1781	1/1:3,26:29:69.24:1227,69,0	1/1:4,11:15:30.10:531,30,0	1/1:5,8:13:15.05:267,15,0	0/0:29,0:29:60.21:0,60,1491	0/0:26,0:26:66.23:0,66,1696	0/0:41,0:41:99:0,111,2795	1/1:2,10:12:27.09:480,27,0	1/1:4,7:10:21.07:373,21,0	1/1:2,10:12:15.05:265,15,0	1/1:3,10:13:24.08:426,24,0	1/1:2,18:20:54.18:961,54,0	0/0:25,0:25:66.23:0,66,1654	1/1:4,1:5:3.01:53,3,0
chr10	32004224	.	A	AC	10413.87	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=8.855;DP=465;FS=2.074;HRun=0;HaplotypeScore=68.3156;InbreedingCoeff=0.9938;MQ=75.83;MQ0=0;MQRankSum=-0.740;QD=44.31;ReadPosRankSum=3.664;VQSLOD=5.3321;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,15:15:39.03:591,39,0	0/0:8,0:8:24.07:0,24,306	0/0:10,0:10:30.10:0,30,409	0/0:9,0:9:18.06:0,18,237	0/0:23,0:23:69.17:0,69,925	0/0:20,0:20:60.20:0,60,839	0/0:9,0:9:24.08:0,24,336	0/0:32,0:32:96.31:0,96,1315	0/0:12,0:12:36.10:0,36,485	1/1:0,25:25:75.26:1195,75,0	1/1:3,17:20:45.15:718,45,0	1/1:1,18:19:51.17:815,51,0	1/1:0,13:13:39.13:623,39,0	1/1:0,20:20:60.20:958,60,0	0/0:19,0:19:57.19:0,57,797	1/1:0,14:14:42.14:671,42,0	1/1:0,19:19:54.18:862,54,0	1/1:1,13:14:33.11:514,33,0	0/0:21,0:21:63.20:0,63,867	0/0:22,0:22:60.19:0,60,822	0/0:22,0:22:63.19:0,63,862	1/1:0,23:23:66.23:1054,66,0	1/1:0,14:14:38.79:592,39,0	1/1:0,14:14:42.14:671,42,0	1/1:0,11:11:33.11:527,33,0	1/1:0,9:10:27.09:432,27,0	0/0:23,0:23:60.14:0,60,756	1/1:0,4:4:12.04:192,12,0
chr10	32004395	.	T	TCCA	1960.35	PASS	AB=0.922;AC=28;AF=0.500;AN=56;BaseQRankSum=6.762;DP=320;FS=12.509;HRun=0;HaplotypeScore=122.6061;InbreedingCoeff=0.5064;MQ=61.72;MQ0=8;MQRankSum=-2.919;QD=9.47;ReadPosRankSum=3.192;VQSLOD=2.5728;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:18,0:18:3.76:131,0,4	0/0:3,0:3:8.99:0,9,76	0/0:19,0:10:15.13:0,15,183	0/0:7,0:5:12.01:0,12,137	0/0:12,0:12:20.47:0,20,218	0/0:11,0:11:26.75:0,27,205	0/0:8,0:8:15.88:0,16,145	0/0:12,0:11:33.01:0,33,306	0/0:5,0:4:8.97:0,9,94	1/1:19,0:18:7.14:159,7,0	1/1:26,0:25:33.21:269,33,0	1/1:3,7:10:5.93:71,6,0	0/1:1,7:8:12.79:30,0,13	1/1:3,6:9:7.21:71,7,0	0/0:7,0:7:20.98:0,21,176	0/1:10,0:10:8.84:9,0,13	1/1:11,0:10:20.52:178,21,0	1/1:16,0:16:5.52:199,6,0	0/0:12,0:11:16.38:0,16,212	0/0:17,0:17:24.78:0,25,264	0/1:9,0:7:8.54:9,0,74	1/1:14,0:13:9.56:162,10,0	1/1:8,0:8:2.94:48,3,0	1/1:5,1:6:8.98:71,9,0	1/1:19,0:18:45.12:421,45,0	1/1:12,0:12:29.54:256,30,0	0/1:5,0:5:17.99:18,0,18	0/1:7,0:6:8.19:57,0,8
chr10	32004397	.	C	CACCTCCTCCTCT	4768.25	PASS	AB=0.933;AC=29;AF=0.518;AN=56;BaseQRankSum=5.343;DP=310;FS=7.964;HRun=0;HaplotypeScore=156.0820;InbreedingCoeff=0.5431;MQ=59.53;MQ0=14;MQRankSum=-4.298;QD=23.04;ReadPosRankSum=2.876;VQSLOD=2.9536;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:14,0:14:43.78:383,0,44	0/0:3,0:3:9.02:0,9,128	0/0:18,0:9:23.86:0,24,241	0/0:7,0:5:12.01:0,12,157	0/0:10,0:10:24.04:0,24,428	0/0:10,0:10:26.18:0,26,297	0/0:9,0:8:18.93:0,19,293	0/0:13,0:11:33.04:0,33,419	0/0:5,0:4:9.50:0,10,175	1/1:19,0:17:2.89:399,3,0	1/1:22,0:21:42.46:543,42,0	1/1:9,0:9:9.03:175,9,0	0/1:8,0:8:12.62:79,0,13	1/1:9,0:9:9.02:150,9,0	0/0:7,0:7:21.02:0,21,251	0/1:5,4:10:22.15:103,0,22	1/1:13,0:11:19.62:242,20,0	1/1:15,0:15:10.28:464,10,0	0/1:12,0:10:10.85:11,0,319	0/0:17,0:17:30.38:0,30,448	0/1:9,0:7:45.44:45,0,89	1/1:14,0:13:12.07:332,12,0	1/1:4,4:10:4.90:188,5,0	1/1:6,0:6:10.56:135,11,0	1/1:18,0:17:48.04:877,48,0	1/1:12,0:12:35.89:532,36,0	0/0:4,0:3:9.01:0,9,152	1/1:7,0:6:11.07:110,11,0
chr10	32004934	.	T	TA	3798.96	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=6.404;DP=322;FS=17.714;HRun=9;HaplotypeScore=50.7914;InbreedingCoeff=0.9233;MQ=79.92;MQ0=0;MQRankSum=-1.443;QD=25.50;ReadPosRankSum=4.382;VQSLOD=2.3938;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,4:6:15.04:166,15,0	0/0:9,0:9:20.98:0,21,178	0/0:10,0:9:13.68:0,14,100	0/0:9,0:10:4.30:0,4,31	0/0:26,1:27:38.80:0,39,566	0/0:18,0:18:44.95:0,45,387	0/0:2,0:2:6:0,6,52	0/0:30,0:30:65.96:0,66,571	0/0:10,0:10:17.98:0,18,156	1/1:6,12:18:42.10:456,42,0	1/1:3,11:14:24.06:266,24,0	1/1:1,7:8:21.06:232,21,0	1/1:2,8:10:24.06:266,24,0	1/1:3,8:11:30.04:314,30,0	0/0:10,0:10:23.97:0,24,205	1/1:3,4:7:15.01:153,15,0	1/1:1,7:8:24.06:265,24,0	1/1:5,6:11:21.06:231,21,0	0/0:13,0:13:29.97:0,30,258	0/0:13,0:13:26.99:0,27,234	0/0:5,0:5:8.99:0,9,78	1/1:6,4:10:15.04:166,15,0	1/1:3,9:12:30.07:323,30,0	1/1:0,2:2:6.02:66,6,0	1/1:2,6:8:15.04:166,15,0	1/1:3,17:19:54.15:597,54,0	0/0:16,0:16:32.91:0,33,286	1/1:0,4:4:12.03:133,12,0
chr10	32004979	.	A	AAT	8054.81	PASS	AB=0.775;AC=40;AF=0.714;AN=56;BaseQRankSum=1.942;DP=316;FS=1.824;HRun=0;HaplotypeScore=56.5118;InbreedingCoeff=0.7141;MQ=73.19;MQ0=1;MQRankSum=-2.032;QD=34.72;ReadPosRankSum=-1.119;VQSLOD=6.2778;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,8:10:18.06:299,18,0	0/0:7,0:7:18.06:0,18,227	0/1:5,0:5:35.55:36,0,53	0/0:14,0:12:9.80:0,10,91	0/0:21,0:21:57.16:0,57,693	0/0:26,0:26:72.20:0,72,880	0/0:4,0:4:9.03:0,9,113	1/1:8,26:34:78.24:1241,78,0	0/0:5,0:5:15.05:0,15,189	1/1:2,14:16:42.12:670,42,0	1/1:4,13:17:39.13:644,39,0	1/1:1,3:5:9.03:138,9,0	1/1:3,2:5:9.03:149,9,0	1/1:2,6:8:21.05:319,21,0	0/0:7,0:7:21.07:0,21,265	1/1:1,3:4:6.02:100,6,0	1/1:2,5:8:15.05:249,15,0	1/1:3,12:15:30.10:498,30,0	1/1:2,9:11:27.09:447,27,0	0/1:2,9:11:10.77:348,0,11	1/1:0,5:5:9.03:149,9,0	1/1:0,2:2:6.02:100,6,0	1/1:4,5:9:15.05:249,15,0	1/1:0,2:2:3.01:50,3,0	1/1:2,10:12:24.08:399,24,0	1/1:5,18:23:54.18:867,54,0	1/1:6,13:19:15.30:556,15,0	1/1:0,11:11:33.11:548,33,0
chr10	32005133	.	CAGGGT	C	8670.64	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=15.209;DP=412;FS=25.707;HRun=0;HaplotypeScore=115.1241;InbreedingCoeff=0.9533;MQ=85.29;MQ0=0;MQRankSum=-15.627;QD=50.71;ReadPosRankSum=2.228;VQSLOD=3.2785;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,6:9:18.06:362,18,0	0/0:6,0:6:18.06:0,18,571	0/0:15,0:15:39.13:0,39,1123	0/0:17,0:17:51.13:0,51,1222	0/0:14,0:14:39.13:0,39,1237	0/0:28,0:28:84.27:0,84,2524	0/0:11,0:11:30.10:0,30,952	0/0:38,0:38:99:0,105,3126	0/0:20,0:20:60.21:0,60,1856	1/1:1,14:15:42.14:911,42,0	1/1:3,9:12:30.07:533,30,0	1/1:0,20:19:51.18:1063,51,0	1/1:2,6:8:15.05:307,15,0	1/1:1,10:11:30.10:649,30,0	0/0:17,0:17:51.16:0,51,1544	1/1:2,13:15:26.93:585,27,0	1/1:2,3:5:6.02:130,6,0	1/1:0,5:5:12.04:253,12,0	0/0:12,0:12:36.12:0,36,1080	0/0:19,0:19:54.19:0,54,1680	0/0:16,0:16:45.15:0,45,1427	1/1:0,6:6:18.06:381,18,0	1/1:1,12:13:33.58:617,34,0	1/1:2,3:5:9.03:186,9,0	1/1:0,17:17:45.15:941,45,0	1/1:3,25:28:75.26:1622,75,0	0/0:28,0:27:84.29:0,84,2641	1/1:0,2:2:6.02:130,6,0
chr10	32005261	.	C	CCA	10416.47	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-13.474;DP=556;FS=0.000;HRun=0;HaplotypeScore=57.8411;InbreedingCoeff=0.9894;MQ=85.80;MQ0=3;MQRankSum=-6.542;QD=37.88;ReadPosRankSum=3.905;VQSLOD=7.0044;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,8:9:24.01:376,24,0	0/0:11,0:11:30.10:0,30,399	0/0:25,0:25:69.11:0,69,799	0/0:14,0:14:26.14:0,26,345	0/0:34,0:34:86.08:0,86,1101	0/0:30,0:30:81.24:0,81,1048	0/0:13,0:13:36.08:0,36,446	0/0:28,0:28:69.20:0,69,878	0/0:22,0:22:51.16:0,51,665	1/1:0,32:32:93.23:1498,93,0	1/1:1,16:17:39.13:659,39,0	1/1:2,22:25:51.17:845,51,0	1/1:4,20:24:60.20:1025,60,0	1/1:1,20:22:45.15:768,45,0	0/0:19,0:19:48.14:0,48,610	1/1:2,18:20:42.14:718,42,0	1/1:3,11:14:18.06:308,18,0	1/1:0,7:6:9.03:154,9,0	0/0:23,0:23:60.18:0,60,768	0/0:13,0:13:36.09:0,36,437	0/0:10,0:10:30.10:0,30,399	1/1:0,11:10:24.08:409,24,0	1/1:2,14:15:39.13:667,39,0	1/1:1,24:25:57.20:973,57,0	1/1:3,12:15:30.10:513,30,0	1/1:3,23:27:69.22:1144,69,0	0/0:39,0:39:99:0,108,1421	1/1:2,9:11:21.07:360,21,0
chr10	32005645	.	CAG	C	12511.36	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=16.290;DP=606;FS=2.097;HRun=0;HaplotypeScore=91.0291;InbreedingCoeff=0.9974;MQ=89.31;MQ0=2;MQRankSum=-4.334;QD=40.62;ReadPosRankSum=4.521;VQSLOD=6.6714;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,11:11:30.10:441,30,0	0/0:8,0:8:24.08:0,24,449	0/0:25,0:25:72.09:0,72,1203	0/0:22,0:22:63.20:0,63,1095	0/0:26,0:26:78.25:0,78,1417	0/0:19,0:19:57.20:0,57,1056	0/0:20,0:20:60.17:0,60,1059	0/0:36,0:36:99:0,99,1805	0/0:18,0:18:54.17:0,54,980	1/1:1,28:28:81.27:1193,81,0	1/1:1,27:27:75.25:1104,75,0	1/1:0,20:20:54.18:795,54,0	1/1:1,29:30:81.27:1192,81,0	1/1:0,21:21:63.21:920,63,0	0/0:21,0:21:63.22:0,63,1163	1/1:0,23:23:66.22:972,66,0	1/1:1,15:16:45.15:662,45,0	1/1:0,7:7:15.05:221,15,0	0/0:21,0:21:63.22:0,63,1171	0/0:25,0:25:75.26:0,75,1394	0/0:25,0:25:75.26:0,75,1373	1/1:0,15:15:39.13:574,39,0	1/1:0,28:28:75.25:1104,75,0	1/1:0,24:24:66.22:972,66,0	1/1:0,14:14:36.12:530,36,0	1/1:0,32:32:96.31:1391,96,0	0/0:32,0:31:90.31:0,90,1672	1/1:0,10:10:30.10:442,30,0
chr10	32007703	.	A	AT	2961.98	PASS	AB=0.568;AC=11;AF=0.196;AN=56;BaseQRankSum=-12.329;DP=575;FS=0.425;HRun=8;HaplotypeScore=51.4842;InbreedingCoeff=0.8799;MQ=73.78;MQ0=0;MQRankSum=1.381;QD=25.53;ReadPosRankSum=1.099;VQSLOD=4.2604;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:98.87:0,99,873	1/1:0,10:10:30.09:346,30,0	0/0:15,0:15:9.85:0,10,172	0/0:8,0:8:16.40:0,16,129	1/1:4,17:21:48.14:554,48,0	1/1:0,25:25:66.20:760,66,0	1/1:1,16:18:45.13:519,45,0	0/0:39,0:39:99:0,99,896	0/1:5,16:21:12.81:373,0,13	0/0:21,0:21:57.02:0,57,522	0/0:21,0:21:56.99:0,57,510	0/0:10,0:10:27.01:0,27,247	0/0:24,0:24:56.61:0,57,556	0/0:17,0:17:42.01:0,42,380	1/1:3,18:21:51.15:589,51,0	0/0:18,0:18:39.01:0,39,357	0/0:28,0:28:72.03:0,72,656	0/0:22,0:22:57.03:0,57,522	0/0:30,0:30:78.02:0,78,710	0/0:18,0:18:54.03:0,54,494	0/0:24,0:24:69.04:0,69,631	0/0:25,0:25:66.03:0,66,604	0/0:18,0:18:48.02:0,48,439	0/0:10,0:10:24.01:0,24,220	0/0:17,0:17:48.02:0,48,436	0/0:20,0:20:51:0,51,463	0/0:26,0:26:72.04:0,72,659	0/0:14,0:14:38.97:0,39,344
chr10	32008068	.	TG	T	3233.06	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=10.372;DP=513;FS=2.059;HRun=2;HaplotypeScore=48.7152;InbreedingCoeff=0.9973;MQ=86.05;MQ0=0;MQRankSum=-1.733;QD=33.33;ReadPosRankSum=2.784;VQSLOD=3.5272;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:90.30:0,90,1348	1/1:0,10:10:30.10:389,30,0	0/0:23,0:23:59.20:0,59,798	0/0:17,0:17:45.12:0,45,593	1/1:1,20:21:51.17:660,51,0	1/1:0,27:27:75.24:973,75,0	1/1:0,12:12:33.11:428,33,0	0/0:26,0:26:75.23:0,75,1070	1/1:0,10:10:24.08:311,24,0	0/0:28,0:28:84.28:0,84,1257	0/0:19,0:19:57.19:0,57,853	0/0:14,0:14:42.12:0,42,589	0/0:20,0:20:60.20:0,60,897	0/0:12,0:12:33.10:0,33,476	1/1:0,17:17:51.17:662,51,0	0/0:19,1:20:21.25:0,21,815	0/0:18,0:18:54.18:0,54,809	0/0:8,0:8:21.07:0,21,314	0/0:14,0:14:42.11:0,42,573	0/0:19,0:19:54.14:0,54,749	0/0:12,0:12:36.12:0,36,539	0/0:15,0:15:42.14:0,42,629	0/0:19,0:19:54.18:0,54,809	0/0:19,0:19:57.19:0,57,854	0/0:21,0:21:60.19:0,60,880	0/0:21,0:21:63.21:0,63,944	0/0:33,0:33:99:0,99,1463	0/0:8,0:8:24.08:0,24,359
chr10	32008203	.	A	AT	8718.45	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=-5.556;DP=469;FS=0.882;HRun=9;HaplotypeScore=47.8497;InbreedingCoeff=0.9210;MQ=68.85;MQ0=0;MQRankSum=-1.847;QD=25.49;ReadPosRankSum=4.081;VQSLOD=5.1869;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,13:18:42.10:456,42,0	1/1:0,7:8:24.05:256,24,0	0/0:12,0:9:3.95:0,4,87	0/0:6,0:6:10.80:0,11,82	1/1:4,25:30:26.48:711,26,0	1/1:2,17:19:22.07:472,22,0	1/1:1,4:5:12.02:125,12,0	0/0:28,1:29:35.75:0,36,534	1/1:2,12:14:30.08:332,30,0	1/1:6,27:33:58.14:856,58,0	1/1:1,21:23:60:645,60,0	1/1:2,10:12:4.03:273,4,0	1/1:3,12:15:27.07:299,27,0	1/1:2,11:13:27.07:299,27,0	1/1:2,17:19:51.14:564,51,0	1/1:2,13:15:33.09:365,33,0	1/1:4,25:29:40.12:671,40,0	1/1:0,5:5:15.04:166,15,0	0/0:19,0:19:32.98:0,33,286	0/0:36,0:36:89.88:0,90,769	0/0:5,0:5:14.97:0,15,125	1/1:2,8:10:21.06:232,21,0	1/1:1,19:20:48.02:531,48,0	1/1:0,5:5:15.04:166,15,0	1/1:1,17:18:22.07:472,22,0	1/1:3,15:18:45.12:497,45,0	0/0:20,0:20:56.95:0,57,488	1/1:1,12:13:30.08:332,30,0
chr10	32008805	.	TG	T	4089.42	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=9.307;DP=529;FS=1.764;HRun=3;HaplotypeScore=58.3592;InbreedingCoeff=0.9942;MQ=82.48;MQ0=0;MQRankSum=-2.571;QD=32.98;ReadPosRankSum=3.483;VQSLOD=3.9887;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,99,1397	1/1:1,5:6:15.05:186,15,0	0/0:20,0:20:57:0,57,762	0/0:12,0:12:34.35:0,34,466	1/1:1,21:22:60.19:742,60,0	1/1:0,23:23:66.21:818,66,0	1/1:2,15:17:42.13:521,42,0	0/0:28,0:28:84.27:0,84,1178	1/1:0,23:23:63.20:781,63,0	0/0:21,0:20:63.21:0,63,889	0/0:9,0:9:18.06:0,18,259	0/0:21,0:21:63.21:0,63,901	0/0:14,0:14:42.14:0,42,603	0/0:16,0:16:48.16:0,48,691	1/1:2,31:33:84.26:1041,84,0	0/0:19,0:19:57.19:0,57,821	0/0:22,0:22:66.22:0,66,949	0/0:31,0:31:93.31:0,93,1339	0/0:17,0:17:51.14:0,51,711	0/0:16,0:16:48.16:0,48,687	0/0:16,0:16:42.13:0,42,588	0/0:17,0:17:48.15:0,48,673	0/0:17,0:17:51.17:0,51,730	0/0:15,0:15:45.15:0,45,648	0/0:11,0:11:30.10:0,30,431	0/0:18,0:18:54.16:0,54,745	0/0:22,0:21:66.22:0,66,950	0/0:8,0:8:21.07:0,21,302
chr10	32009103	.	A	AG	1694.98	PASS	AB=1.000;AC=39;AF=0.722;AN=54;BaseQRankSum=-1.185;DP=224;FS=0.000;HRun=8;HaplotypeScore=55.3249;InbreedingCoeff=0.6845;MQ=83.27;MQ0=6;MQRankSum=-0.566;QD=12.94;ReadPosRankSum=0.385;VQSLOD=2.6962;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,3:9:18:184,18,0	0/0:6,0:5:12.01:0,12,110	0/0:26,0:12:13.76:0,14,182	0/0:17,0:14:5.63:0,6,98	0/0:9,0:9:8.57:0,9,82	0/0:13,0:13:27.01:0,27,246	0/1:6,0:6:1.85:2,0,46	1/1:7,1:8:8.96:77,9,0	0/0:11,0:11:22.77:0,23,183	1/1:5,2:7:2.90:34,3,0	1/1:2,3:5:6.02:69,6,0	1/1:1,3:4:9.01:95,9,0	1/1:2,1:3:9.02:99,9,0	1/1:4,0:4:4.83:39,5,0	0/0:8,0:8:11.55:0,12,109	1/1:2,7:9:10.58:108,11,0	1/1:4,3:8:11.52:113,12,0	1/1:1,1:2:5.99:56,6,0	1/1:5,4:7:12.04:138,12,0	1/1:5,4:8:9.03:104,9,0	1/1:9,6:14:15.31:203,15,0	1/1:2,2:4:6.02:69,6,0	1/1:3,6:9:5.76:70,6,0	1/1:1,6:7:14.78:149,15,0	1/1:2,1:3:3.01:32,3,0	1/1:2,1:3:9.02:95,9,0	1/1:2,4:6:12.92:140,13,0	./.
chr10	32009129	.	GGA	G	249.75	PASS	AB=0.917;AC=11;AF=0.229;AN=48;BaseQRankSum=-0.686;DP=129;FS=2.511;HRun=0;HaplotypeScore=28.0752;InbreedingCoeff=0.1577;MQ=61.08;MQ0=8;MQRankSum=-2.897;QD=4.63;ReadPosRankSum=0.573;VQSLOD=1.4885;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:6:14.77:0,15,210	./.	0/0:16,0:6:8.53:0,9,93	0/0:8,0:5:12.61:0,13,141	0/0:0,3:3:0:0,0,0	1/1:1,6:7:12:138,12,0	0/1:4,0:3:0.10:0,0,9	0/1:11,0:11:15.08:15,0,293	1/1:0,6:6:5.90:82,6,0	0/1:4,1:5:4.54:5,0,107	./.	0/0:5,0:5:11.32:0,11,150	./.	0/0:2,0:2:3.01:0,3,56	1/1:2,2:4:2.84:91,3,0	0/0:2,0:2:6.02:0,6,88	0/0:3,0:3:5.93:0,6,75	0/0:1,0:1:3.01:0,3,55	0/0:4,0:3:6.02:0,6,116	0/0:2,0:1:3.01:0,3,37	0/1:13,0:12:8.18:8,0,55	0/0:3,0:2:2.99:0,3,37	0/0:3,1:4:6.02:0,6,93	0/0:2,0:2:2.99:0,3,56	./.	0/1:2,1:3:36.24:36,0,52	0/0:2,0:2:6.02:0,6,106	0/0:4,0:3:3.01:0,3,58
chr10	32009205	.	A	AG	907.32	PASS	AC=12;AF=0.231;AN=52;BaseQRankSum=-2.682;DP=213;FS=21.271;HRun=6;HaplotypeScore=48.8783;InbreedingCoeff=0.8004;MQ=58.23;MQ0=0;MQRankSum=-0.477;QD=19.30;ReadPosRankSum=0.342;VQSLOD=1.9192;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:32.74:0,33,335	1/1:0,1:1:3.01:38,3,0	0/0:3,0:2:6.01:0,6,64	0/0:8,0:5:17.97:0,18,170	1/1:1,9:10:6.45:76,6,0	1/1:0,5:5:12:133,12,0	1/1:2,9:11:15.05:188,15,0	0/0:16,0:16:29.76:0,30,404	1/1:3,4:8:10.74:246,11,0	0/0:8,0:8:24.05:0,24,244	./.	0/0:9,0:9:24.02:0,24,231	0/0:7,0:7:15.01:0,15,145	0/0:10,0:10:15.02:0,15,152	1/1:2,10:12:33.08:391,33,0	0/0:7,0:7:16.28:0,16,156	0/0:3,0:3:9.02:0,9,92	0/0:5,0:5:15:0,15,143	0/0:9,0:9:17.61:0,18,157	0/0:8,0:8:18.04:0,18,183	0/0:19,0:19:30.06:0,30,302	0/0:6,0:6:1.03:0,1,81	0/0:5,0:5:9.02:0,9,92	0/0:7,0:7:12.49:0,12,117	0/0:4,0:4:9.02:0,9,92	0/0:10,0:10:27.06:0,27,275	0/0:9,0:9:21.04:0,21,213	./.
chr10	32010162	.	T	TA	18943.95	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-12.234;DP=602;FS=13.987;HRun=0;HaplotypeScore=54.2615;InbreedingCoeff=0.9978;MQ=80.25;MQ0=0;MQRankSum=-2.106;QD=41.18;ReadPosRankSum=2.888;VQSLOD=4.0978;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,27:27:78.26:1189,78,0	0/0:12,0:12:36.12:0,36,503	0/0:15,0:15:44.71:0,45,537	0/0:17,0:17:16.90:0,17,451	0/0:29,0:29:87.27:0,87,1183	0/0:19,0:19:57.17:0,57,766	0/0:15,0:15:45.15:0,45,629	1/1:1,27:28:81.20:1134,81,0	0/0:20,0:20:56.55:0,57,749	1/1:0,24:24:72.24:1102,72,0	1/1:1,24:25:75.25:1131,75,0	1/1:0,23:24:66.22:999,66,0	1/1:0,22:22:57.19:871,57,0	1/1:0,22:22:60.20:918,60,0	0/0:15,0:15:45.13:0,45,598	1/1:1,17:18:42.14:643,42,0	1/1:0,28:28:78.26:1192,78,0	1/1:0,20:20:48.14:710,48,0	1/1:0,20:20:60.20:918,60,0	1/1:1,27:28:78.21:1165,78,0	1/1:0,9:9:24.08:367,24,0	1/1:0,17:17:48.09:707,48,0	1/1:0,33:33:87.21:1302,87,0	1/1:0,12:12:36.12:551,36,0	1/1:0,27:27:75.25:1145,75,0	1/1:0,26:26:72.23:1079,72,0	1/1:1,33:34:90.30:1364,90,0	1/1:1,15:16:30.10:458,30,0
chr10	32010913	.	C	CT	3219.08	PASS	AB=0.550;AC=11;AF=0.196;AN=56;BaseQRankSum=-10.703;DP=631;FS=0.394;HRun=9;HaplotypeScore=61.6934;InbreedingCoeff=0.8740;MQ=81.81;MQ0=0;MQRankSum=-2.629;QD=22.83;ReadPosRankSum=1.905;VQSLOD=4.5343;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:62.91:0,63,542	1/1:5,15:20:22.07:472,22,0	0/0:26,0:26:27.09:0,27,410	0/0:13,0:13:17.95:0,18,179	1/1:7,22:29:60.12:648,60,0	1/1:4,25:29:72.19:796,72,0	1/1:3,16:19:4.99:495,5,0	0/0:25,0:26:59.01:0,59,501	0/1:4,18:22:0.97:447,0,1	0/0:32,0:32:77.94:0,78,672	0/0:30,0:30:77.98:0,78,677	0/0:18,0:18:50.92:0,51,428	0/0:25,0:25:62.98:0,63,547	0/0:12,0:12:29.98:0,30,260	1/1:2,20:22:49.02:533,49,0	0/0:15,0:15:44.98:0,45,388	0/0:27,0:27:68.97:0,69,599	0/0:16,0:16:44.99:0,45,391	0/0:25,0:25:59.93:0,60,512	0/0:31,0:32:89:0,89,757	0/0:13,0:13:38.99:0,39,338	0/0:20,0:20:56.98:0,57,492	0/0:23,0:23:53.94:0,54,465	0/0:18,0:18:53.97:0,54,465	0/0:19,0:19:47.93:0,48,408	0/0:28,0:28:62.95:0,63,547	0/0:41,0:41:61.10:0,61,839	0/0:1,0:1:3:0,3,26
chr10	32011214	.	A	AT	12835.21	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-16.398;DP=635;FS=7.056;HRun=8;HaplotypeScore=68.9541;InbreedingCoeff=0.9874;MQ=87.89;MQ0=0;MQRankSum=-3.862;QD=27.66;ReadPosRankSum=1.599;VQSLOD=5.4883;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,34:39:90.27:1038,90,0	0/0:4,0:13:18.33:0,18,54	0/0:23,0:23:46.72:0,47,423	0/0:21,0:20:20.54:0,21,250	0/0:0,0:29:52.48:0,52,154	0/0:1,0:28:50.93:0,51,150	0/0:0,0:18:32.59:0,33,96	1/1:7,21:28:63.18:717,63,0	0/0:0,0:19:38.70:0,39,114	1/1:5,30:35:93.27:1069,93,0	1/1:2,25:27:69.17:782,69,0	1/1:2,14:16:39.12:450,39,0	1/1:2,20:22:51.15:588,51,0	1/1:2,14:16:39.12:450,39,0	0/0:3,0:20:32.59:0,33,95	1/1:4,20:24:51.15:589,51,0	1/1:5,14:19:36.11:415,36,0	1/1:2,13:15:39.12:450,39,0	1/1:6,15:21:20.65:479,21,0	1/1:2,27:29:75.22:864,75,0	1/1:0,21:21:60.18:692,60,0	1/1:3,16:19:42.12:481,42,0	1/1:4,18:22:51.15:586,51,0	1/1:3,19:22:51.15:589,51,0	1/1:4,16:20:48.14:548,48,0	1/1:2,27:30:84.03:918,84,0	1/1:2,33:35:89.99:1023,90,0	1/1:0,4:4:9.03:104,9,0
chr10	32011520	.	C	CT	2922.22	PASS	AB=0.717;AC=35;AF=0.625;AN=56;BaseQRankSum=-10.177;DP=651;FS=6.597;HRun=14;HaplotypeScore=74.8347;InbreedingCoeff=0.2600;MQ=69.83;MQ0=15;MQRankSum=-0.894;QD=6.04;ReadPosRankSum=0.668;VQSLOD=2.5007;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:20,25:45:2.82:205,0,3	1/1:6,8:15:7.57:179,8,0	0/0:20,0:10:8.25:0,8,39	0/1:26,0:17:12.47:12,0,42	1/1:14,3:25:1.82:125,2,0	1/1:7,15:23:4.21:218,4,0	1/1:5,14:18:21:184,21,0	0/0:11,0:39:40.84:0,41,129	0/1:12,3:16:11.90:76,0,12	1/1:25,4:28:10.48:188,10,0	1/1:7,6:13:14.79:113,15,0	0/1:11,14:23:3.53:68,0,4	1/1:9,11:20:3.02:114,3,0	1/1:6,14:21:10.78:240,11,0	0/1:6,15:20:4.27:91,0,4	1/1:3,11:13:7.73:192,8,0	1/1:13,22:35:9.24:260,9,0	0/1:8,7:16:1.43:102,0,1	0/0:14,0:31:34.60:0,35,121	0/0:6,0:28:15.96:0,16,67	0/0:10,0:24:36.40:0,36,114	1/1:7,13:22:6.62:190,7,0	1/1:5,11:19:4.43:135,4,0	0/1:6,11:18:11.92:99,0,12	0/1:6,14:20:18.98:90,0,19	1/1:14,14:27:6.90:202,7,0	0/0:3,0:22:26.28:0,26,76	0/1:7,1:7:17.49:17,0,28
chr10	32012059	.	TCTC	T	5454.19	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=2.716;DP=619;FS=0.777;HRun=0;HaplotypeScore=120.1417;InbreedingCoeff=0.9975;MQ=76.64;MQ0=0;MQRankSum=-3.722;QD=39.81;ReadPosRankSum=0.298;VQSLOD=5.6460;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:66.23:0,66,1369	0/0:7,0:7:18.06:0,18,361	0/0:20,0:19:48.02:0,48,814	0/0:21,0:21:33.69:0,34,732	0/0:28,0:28:81.26:0,81,1648	0/0:24,0:24:72.25:0,72,1500	0/0:20,0:20:54.19:0,54,1133	1/1:3,34:38:99:1673,111,0	0/0:13,0:13:39.13:0,39,829	0/0:22,0:22:60.21:0,60,1247	0/0:20,0:20:54.19:0,54,1134	0/0:19,0:19:54.18:0,54,1096	0/0:21,0:21:54.19:0,54,1147	0/0:20,0:20:57.18:0,57,1111	0/0:29,0:29:81.25:0,81,1667	0/0:30,0:30:84.29:0,84,1790	0/0:20,0:20:60.17:0,60,1159	0/0:17,0:17:33.07:0,33,598	1/1:2,24:26:72.23:1098,72,0	1/1:1,27:29:78.23:1192,78,0	1/1:3,18:21:33.57:531,34,0	0/0:22,0:22:66.23:0,66,1326	0/0:22,0:22:63.22:0,63,1312	0/0:17,0:17:42.14:0,42,907	0/0:21,0:21:63.20:0,63,1251	0/0:33,0:32:90.27:0,90,1804	1/1:2,21:23:60.20:960,60,0	0/0:10,0:10:24.08:0,24,519
chr10	32013531	.	T	TA	13324.90	PASS	AB=1.000;AC=43;AF=0.768;AN=56;BaseQRankSum=-12.851;DP=602;FS=0.000;HRun=7;HaplotypeScore=58.8544;InbreedingCoeff=0.9096;MQ=65.26;MQ0=0;MQRankSum=-0.625;QD=29.09;ReadPosRankSum=5.405;VQSLOD=4.8478;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,19:22:54.17:652,54,0	1/1:1,6:7:15.05:181,15,0	0/0:15,0:14:30.02:0,30,280	0/1:12,0:12:5.37:5,0,162	1/1:5,30:35:90.22:1061,90,0	1/1:3,17:20:42.13:507,42,0	1/1:2,17:19:28.39:557,28,0	0/0:26,0:26:63.07:0,63,604	1/1:0,25:25:66.20:797,66,0	1/1:4,31:35:93.29:1123,93,0	1/1:6,19:25:60.03:694,60,0	1/1:2,13:15:36.11:435,36,0	1/1:4,20:24:57.17:688,57,0	1/1:3,20:23:51.16:616,51,0	1/1:2,17:19:48.15:580,48,0	1/1:3,18:21:48.15:580,48,0	1/1:2,11:13:36.07:418,36,0	1/1:2,12:14:36.06:418,36,0	0/0:24,0:24:60.07:0,60,573	0/0:31,1:32:47.86:0,48,734	0/0:18,0:18:51.08:0,51,493	1/1:2,11:14:35.98:413,36,0	1/1:3,31:34:78.02:942,78,0	1/1:0,21:21:63.19:761,63,0	1/1:1,20:21:54.17:652,54,0	1/1:3,33:36:96.27:1134,96,0	0/0:29,0:29:87.14:0,87,840	1/1:0,3:3:9.03:109,9,0
chr10	32014184	.	T	TC	3465.87	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-4.276;DP=498;FS=0.000;HRun=6;HaplotypeScore=93.3073;InbreedingCoeff=0.9823;MQ=99.73;MQ0=0;MQRankSum=-3.059;QD=35.73;ReadPosRankSum=2.603;VQSLOD=2.2157;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:54.09:0,54,537	1/1:0,6:6:18.06:226,18,0	0/0:24,0:24:51.17:0,51,585	0/0:31,0:31:84.14:0,84,836	1/1:1,30:31:90.29:1131,90,0	1/1:1,24:25:69.22:867,69,0	1/1:0,6:6:18.06:222,18,0	0/0:38,0:38:81.17:0,81,826	1/1:1,16:17:48.15:604,48,0	0/0:25,0:25:69.15:0,69,704	0/0:19,0:19:57.12:0,57,576	0/0:16,0:16:45.08:0,45,452	0/0:13,0:13:36.08:0,36,367	0/0:15,0:15:42.09:0,42,428	1/1:0,12:12:33.11:415,33,0	0/0:10,0:10:30.04:0,30,298	0/0:16,0:16:48.11:0,48,490	0/0:8,0:8:18.01:0,18,174	0/0:19,0:19:51.11:0,51,520	0/0:25,0:25:66.14:0,66,673	0/0:12,0:12:33.07:0,33,336	0/0:8,0:8:21.05:0,21,214	0/0:22,0:22:63.14:0,63,643	0/0:11,0:11:33.08:0,33,337	0/0:21,0:21:60.14:0,60,612	0/0:23,0:23:66.15:0,66,673	0/0:22,0:22:63.14:0,63,642	0/0:4,0:4:9.02:0,9,92
chr10	32014743	.	A	AC	9419.14	PASS	AB=1.000;AC=42;AF=0.750;AN=56;BaseQRankSum=4.818;DP=316;FS=0.593;HRun=0;HaplotypeScore=48.1189;InbreedingCoeff=0.7494;MQ=70.84;MQ0=0;MQRankSum=-1.521;QD=36.23;ReadPosRankSum=-0.337;VQSLOD=4.1631;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,3:16:42.08:547,42,0	0/1:5,0:5:24.61:25,0,122	0/1:11,0:7:39.61:40,0,55	0/0:10,0:8:11.95:0,12,102	0/0:13,0:13:36.12:0,36,502	0/0:16,0:16:48.16:0,48,671	0/0:8,0:8:24.08:0,24,335	1/1:3,34:37:99:1549,105,0	0/0:3,0:3:9.03:0,9,126	1/1:20,3:23:68.81:897,69,0	1/1:8,4:12:36.01:392,36,0	1/1:3,3:6:18.03:207,18,0	1/1:2,2:4:12.04:183,12,0	1/1:3,3:6:18.05:239,18,0	0/0:6,0:6:18.05:0,18,236	1/1:5,2:7:21.06:293,21,0	1/1:15,2:17:48.07:621,48,0	1/1:6,6:12:33.09:434,33,0	1/1:0,11:11:31.66:475,32,0	1/1:0,11:11:33.06:496,33,0	1/1:1,9:10:18.06:287,18,0	1/1:0,6:6:14.90:137,15,0	1/1:4,4:8:24.07:347,24,0	1/1:2,3:5:8.41:138,8,0	1/1:5,6:10:24.06:336,24,0	1/1:12,8:20:60.08:792,60,0	1/1:0,20:20:57.19:894,57,0	1/1:2,0:2:6.02:91,6,0
chr10	32014753	.	A	AT	1898.81	PASS	AB=1.000;AC=12;AF=0.214;AN=56;BaseQRankSum=-3.711;DP=279;FS=7.844;HRun=7;HaplotypeScore=66.6205;InbreedingCoeff=0.6811;MQ=63.21;MQ0=1;MQRankSum=0.078;QD=20.64;ReadPosRankSum=0.276;VQSLOD=2.8742;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:15:28.40:0,28,138	0/0:2,0:2:5.82:0,6,35	0/1:9,0:5:9.91:10,0,27	0/1:9,0:5:2.99:3,0,3	0/0:14,0:14:32.92:0,33,305	0/0:17,0:17:48.06:0,48,458	0/0:10,0:10:14.99:0,15,138	1/1:10,19:30:78.21:894,78,0	0/0:3,0:3:9.01:0,9,87	0/0:17,0:18:40.89:0,41,180	0/0:5,0:9:19.14:0,19,105	0/0:4,0:6:13.94:0,14,74	0/0:4,0:4:5.17:0,5,20	0/0:4,0:5:11.32:0,11,67	0/0:4,0:4:9.01:0,9,87	0/0:6,0:7:15.89:0,16,75	0/0:14,0:16:40.17:0,40,196	0/0:10,0:12:21.96:0,22,130	1/1:4,4:8:18.05:212,18,0	1/1:2,9:11:19.67:282,20,0	1/1:4,4:8:15.05:179,15,0	0/0:0,0:3:8.39:0,8,48	0/0:4,0:4:5.17:0,5,20	0/0:4,0:5:2.49:0,2,10	0/0:6,0:11:27.27:0,27,155	0/0:14,0:18:36.42:0,36,165	1/1:4,13:17:42.11:490,42,0	0/0:2,0:2:2.68:0,3,11
chr10	32016064	.	AT	A	779.82	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=2.831;DP=559;FS=0.711;HRun=6;HaplotypeScore=61.9449;InbreedingCoeff=0.8888;MQ=46.09;MQ0=18;MQRankSum=-3.826;QD=10.13;ReadPosRankSum=0.429;VQSLOD=0.7406;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:28:42.09:0,42,524	0/0:12,0:12:36.12:0,36,473	0/0:11,0:2:6.02:0,6,79	0/0:16,0:1:3.01:0,3,39	0/0:30,0:30:81.20:0,81,1043	0/0:23,0:23:63.20:0,63,828	0/0:9,0:9:24.02:0,24,290	1/1:4,13:11:27.07:289,27,0	0/0:23,0:23:60.20:0,60,789	0/0:23,1:24:63.20:0,63,822	0/0:26,1:27:53.99:0,54,618	0/0:20,0:19:30.06:0,30,371	0/0:22,0:22:45.13:0,45,577	0/0:12,0:12:27.04:0,27,330	0/0:18,0:18:51.14:0,51,642	0/0:17,0:16:45.14:0,45,578	0/0:20,0:17:23.91:0,24,290	0/0:15,0:13:27.09:0,27,350	1/1:2,3:1:3.01:32,3,0	1/1:4,18:18:21.03:216,21,0	1/1:1,6:7:15:149,15,0	0/0:40,0:39:78.07:0,78,935	0/0:28,0:28:60.10:0,60,754	0/0:17,0:17:30.10:0,30,395	0/0:19,0:19:48.16:0,48,631	0/0:32,0:30:87.28:0,87,1134	1/1:1,25:23:24.06:258,24,0	0/0:12,0:12:33.11:0,33,434
chr10	32016169	.	TC	T	2947.45	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=3.407;DP=524;FS=2.653;HRun=2;HaplotypeScore=91.7954;InbreedingCoeff=0.9900;MQ=54.38;MQ0=14;MQRankSum=-1.776;QD=29.18;ReadPosRankSum=-1.104;VQSLOD=3.0404;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:22:52.62:0,53,823	0/0:17,0:17:51.17:0,51,754	0/0:12,0:6:12.40:0,12,130	0/0:9,0:6:17.71:0,18,186	0/0:36,0:36:98.84:0,99,1343	0/0:19,0:19:57.18:0,57,824	0/0:12,0:12:36.11:0,36,511	1/1:1,27:24:69.19:844,69,0	0/0:17,0:17:45.15:0,45,666	0/0:23,0:23:69.15:0,69,945	0/0:18,0:18:51.16:0,51,728	0/0:13,0:13:39.05:0,39,526	0/0:16,0:16:45.15:0,45,661	0/0:14,0:14:42.08:0,42,569	0/0:18,0:18:51.16:0,51,734	0/0:14,0:14:42.10:0,42,546	0/0:34,0:31:87.26:0,87,1246	0/0:15,0:14:39.10:0,39,548	1/1:2,11:9:27.08:338,27,0	1/1:0,29:28:78.13:969,78,0	1/1:0,10:10:21.07:272,21,0	0/0:21,0:21:51.04:0,51,711	0/0:19,0:19:44.99:0,45,632	0/0:14,0:14:29.95:0,30,371	0/0:21,0:21:48.05:0,48,671	0/0:17,0:17:51.14:0,51,714	1/1:1,20:20:54.18:699,54,0	0/0:21,0:21:45.15:0,45,662
chr10	32016835	.	A	ATCTTTACT	7577.99	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-5.059;DP=517;FS=19.142;HRun=0;HaplotypeScore=109.3958;InbreedingCoeff=0.9443;MQ=52.78;MQ0=26;MQRankSum=-11.207;QD=68.27;ReadPosRankSum=-2.501;VQSLOD=2.5652;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:13:30.10:0,30,783	0/0:8,0:8:18.06:0,18,477	0/0:31,0:7:10.60:0,11,119	0/0:36,0:7:5.21:0,5,23	0/0:29,0:29:69.09:0,69,1768	0/0:14,0:13:32.96:0,33,849	0/0:24,0:24:54.15:0,54,1363	1/1:17,8:24:48.12:1638,48,0	0/0:17,0:17:45.15:0,45,1212	0/0:24,0:24:57.20:0,57,1545	0/0:20,0:20:51.17:0,51,1312	0/0:24,0:24:60.21:0,60,1614	0/0:17,0:17:45.13:0,45,1161	0/0:14,0:14:39.13:0,39,1057	0/0:18,0:18:45.14:0,45,1149	0/0:14,0:14:36.12:0,36,956	0/0:16,0:16:39.08:0,39,927	0/0:10,0:10:26.89:0,27,703	1/1:11,8:15:39.10:1556,39,0	1/1:11,12:26:51.18:1935,51,0	1/1:4,2:6:9.03:258,9,0	0/0:12,0:12:30.09:0,30,718	0/0:12,0:12:21.05:0,21,508	0/0:7,0:7:18.06:0,18,488	0/0:16,0:15:45.15:0,45,1184	0/0:13,0:13:36.12:0,36,968	1/1:13,15:31:51.18:2191,51,0	0/0:13,0:13:36.12:0,36,925
chr10	32017316	.	C	CT	3176.96	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-7.872;DP=590;FS=0.415;HRun=7;HaplotypeScore=57.9401;InbreedingCoeff=0.9772;MQ=53.24;MQ0=23;MQRankSum=0.593;QD=25.02;ReadPosRankSum=0.646;VQSLOD=4.0578;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:35:86.16:0,86,812	1/1:0,8:8:24.07:290,24,0	0/0:23,0:3:8.51:0,9,67	0/0:30,0:6:18.03:0,18,174	1/1:5,30:35:84.12:989,84,0	1/1:2,30:32:75.23:906,75,0	1/1:2,11:12:27.08:326,27,0	0/0:42,0:40:99:0,105,1010	1/1:4,16:20:42.09:491,42,0	0/0:21,0:21:54.06:0,54,515	0/0:30,0:30:90.15:0,90,869	0/0:8,0:8:21.01:0,21,192	0/0:18,0:18:45.07:0,45,434	0/0:13,0:13:30.05:0,30,289	1/1:5,14:19:30.09:362,30,0	0/0:15,0:15:45.07:0,45,434	0/0:31,0:31:67.55:0,68,714	0/0:21,0:21:30.63:0,31,413	0/0:18,0:14:39.06:0,39,377	0/0:26,0:26:69.06:0,69,652	0/0:13,0:13:30.04:0,30,290	0/0:12,0:12:36.06:0,36,347	0/0:21,0:21:33.55:0,34,524	0/0:16,0:16:48.08:0,48,464	0/0:14,0:14:30.04:0,30,289	0/0:28,0:28:81.13:0,81,782	0/0:22,0:21:57.05:0,57,538	0/0:5,0:5:12.02:0,12,116
chr10	32020712	.	A	AT	12555.78	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-16.373;DP=600;FS=10.419;HRun=7;HaplotypeScore=82.1912;InbreedingCoeff=0.9639;MQ=74.41;MQ0=0;MQRankSum=-3.041;QD=29.13;ReadPosRankSum=1.008;VQSLOD=4.8362;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,16:20:34.99:530,35,0	0/0:13,0:13:30.04:0,30,290	0/0:9,0:9:17.97:0,18,164	0/0:13,0:12:27.03:0,27,258	0/0:38,0:38:96.14:0,96,927	0/0:21,0:21:56.99:0,57,532	0/0:17,0:17:39:0,39,362	1/1:10,32:42:96.29:1159,96,0	0/0:28,0:28:72.11:0,72,695	1/1:6,27:33:58.28:983,58,0	1/1:5,30:35:90.28:1083,90,0	1/1:5,14:19:39.12:471,39,0	1/1:3,12:15:7.13:368,7,0	1/1:2,14:16:39.12:471,39,0	0/0:30,0:30:84.06:0,84,795	1/1:2,15:17:16.16:478,16,0	1/1:3,23:26:63.19:761,63,0	1/1:2,10:12:30.09:362,30,0	1/1:5,11:16:7.10:354,7,0	1/1:1,23:24:66.17:782,66,0	1/1:5,14:19:13.16:442,13,0	1/1:1,25:26:75.23:905,75,0	1/1:2,13:15:39.12:471,39,0	1/1:1,9:10:27.08:326,27,0	1/1:5,17:22:48.15:579,48,0	1/1:5,28:33:84.26:1014,84,0	1/1:0,17:16:48.15:580,48,0	1/1:1,13:14:36.11:435,36,0
chr10	32020778	.	CT	C	4834.56	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=8.939;DP=576;FS=1.169;HRun=3;HaplotypeScore=83.0070;InbreedingCoeff=0.9920;MQ=88.18;MQ0=0;MQRankSum=0.542;QD=34.78;ReadPosRankSum=2.569;VQSLOD=5.4653;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:54.18:0,54,778	1/1:0,13:13:36.11:446,36,0	0/0:23,0:23:63.19:0,63,869	0/0:18,0:18:39.71:0,40,661	1/1:1,32:33:93.29:1153,93,0	1/1:1,28:29:78.24:967,78,0	1/1:0,13:13:39.12:483,39,0	0/0:32,0:32:84.26:0,84,1177	1/1:0,23:23:63.20:781,63,0	0/0:37,0:37:99:0,108,1499	0/0:21,0:21:60.14:0,60,792	0/0:15,0:15:39.13:0,39,561	0/0:21,0:21:63.21:0,63,904	0/0:11,0:11:33.11:0,33,475	1/1:0,28:28:81.25:1004,81,0	0/0:16,1:17:10.96:0,11,611	0/0:18,0:18:51.16:0,51,716	0/0:12,0:12:36.11:0,36,499	0/0:17,0:17:51.17:0,51,735	0/0:29,0:29:84.28:0,84,1210	0/0:20,0:20:60.20:0,60,864	0/0:25,0:25:72.23:0,72,1020	0/0:19,0:19:57.19:0,57,807	0/0:16,0:16:45.09:0,45,605	0/0:13,0:13:39.11:0,39,541	0/0:20,0:20:60.20:0,60,864	0/0:21,0:21:63.16:0,63,867	0/0:14,0:14:39.13:0,39,561
chr10	32022045	.	G	GA	436.09	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-4.343;DP=591;FS=0.883;HRun=9;HaplotypeScore=76.8707;InbreedingCoeff=0.9732;MQ=69.45;MQ0=4;MQRankSum=-0.610;QD=22.95;ReadPosRankSum=1.136;VQSLOD=4.4609;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,105,904	0/0:9,0:9:20.99:0,21,181	0/0:19,0:14:31.60:0,32,245	0/0:16,0:15:37.65:0,38,325	0/0:25,0:25:65.98:0,66,573	0/0:18,0:19:44.03:0,44,370	0/0:17,0:17:35.98:0,36,312	0/0:22,0:22:42.44:0,42,366	1/1:0,19:19:48.13:531,48,0	0/0:33,0:33:71.96:0,72,625	0/0:10,0:10:26.99:0,27,234	0/0:16,0:16:44.98:0,45,390	0/0:15,0:15:44.94:0,45,380	0/0:19,0:19:50.98:0,51,443	0/0:19,0:19:47.97:0,48,417	0/0:22,0:22:59.95:0,60,517	0/0:27,0:27:71.98:0,72,625	0/0:18,1:19:13.71:0,14,323	0/0:20,0:20:53.98:0,54,467	0/0:26,1:27:32.85:0,33,512	0/0:21,0:21:62.99:0,63,547	0/0:14,0:14:35.96:0,36,305	0/0:22,0:22:50.98:0,51,442	0/0:27,0:27:77.92:0,78,665	0/0:17,0:17:38.98:0,39,338	0/0:27,0:27:77.98:0,78,677	0/0:30,0:30:83.98:0,84,728	0/0:17,0:17:38.98:0,39,339
chr10	32023809	.	C	CATTACTTACTAA	21938.38	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-2.737;DP=772;FS=6.020;HRun=0;HaplotypeScore=248.5559;InbreedingCoeff=0.9999;MQ=84.00;MQ0=0;MQRankSum=-17.930;QD=131.37;ReadPosRankSum=0.748;VQSLOD=4.2122;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,156,5653	1/1:8,6:16:35.81:1832,36,0	0/0:32,0:32:92.82:0,93,2999	0/0:34,0:34:99:0,99,2886	1/1:11,8:20:32.98:1555,33,0	1/1:16,14:31:90.27:4316,90,0	1/1:15,14:32:78.27:4664,78,0	0/0:35,0:35:94.54:0,95,3096	1/1:9,12:24:63.22:3693,63,0	0/0:31,0:31:87.28:0,87,3144	0/0:19,0:19:53.92:0,54,2016	0/0:25,0:25:72.23:0,72,2628	0/0:26,0:26:78.27:0,78,2970	0/0:22,0:22:63.20:0,63,2199	1/1:12,23:43:99:5879,102,0	0/0:29,0:29:84.29:0,84,3075	0/0:29,0:29:81.28:0,81,2997	0/0:18,0:18:54.19:0,54,2077	0/0:25,0:25:75.23:0,75,2676	0/0:22,0:22:63.22:0,63,2355	0/0:36,0:36:99:0,105,4011	0/0:26,0:26:72.23:0,72,2577	0/0:19,0:19:48.15:0,48,1624	0/0:30,0:30:90.31:0,90,3339	0/0:20,0:20:60.21:0,60,2267	0/0:31,0:31:87.29:0,87,3060	0/0:24,0:24:66.23:0,66,2424	0/0:19,0:19:57.20:0,57,2174
chr10	32024271	.	C	CTATT	16546.57	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-14.911;DP=557;FS=1.467;HRun=0;HaplotypeScore=77.2957;InbreedingCoeff=0.9748;MQ=88.12;MQ0=0;MQRankSum=-4.375;QD=62.91;ReadPosRankSum=4.933;VQSLOD=6.8915;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,21:26:54.10:1319,54,0	0/0:14,0:14:42.13:0,42,753	0/0:23,0:23:51.13:0,51,820	0/0:18,0:18:51.15:0,51,872	0/0:31,0:31:87.25:0,87,1517	0/0:26,0:26:69.19:0,69,1188	0/0:28,0:28:78.24:0,78,1380	0/0:26,0:26:66.21:0,66,1172	0/0:21,0:21:60.21:0,60,1119	1/1:3,29:34:87.25:2114,87,0	1/1:0,11:13:35.99:780,36,0	1/1:1,14:15:39.13:1039,39,0	1/1:1,12:13:30.10:800,30,0	1/1:1,14:15:39.13:1040,39,0	0/0:18,0:18:51.16:0,51,916	1/1:1,8:9:21.07:560,21,0	1/1:3,16:19:42.14:1120,42,0	1/1:0,14:14:36.12:960,36,0	0/0:16,0:16:42.13:0,42,726	0/0:31,0:31:84.27:0,84,1524	0/0:17,0:17:48.16:0,48,895	1/1:0,20:20:45.07:1136,45,0	1/1:1,29:31:78.27:2072,78,0	1/1:1,6:8:21.03:500,21,0	1/1:1,19:20:51.13:1299,51,0	1/1:3,20:24:66.23:1729,66,0	0/0:25,0:24:66.20:0,66,1161	1/1:0,1:2:3.01:80,3,0
chr10	32024698	.	TAAC	T	3008.91	PASS	AB=0.774;AC=38;AF=0.864;AN=44;BaseQRankSum=-0.981;DP=570;FS=1.746;HRun=0;HaplotypeScore=100.0098;InbreedingCoeff=0.2854;MQ=71.05;MQ0=6;MQRankSum=-1.170;QD=7.15;ReadPosRankSum=2.530;VQSLOD=2.8996;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:27,5:32:1.45:108,0,1	./.	./.	./.	./.	1/1:8,0:13:2.98:21,3,0	0/0:18,0:18:2.98:0,3,22	./.	1/1:12,0:25:11.90:84,12,0	1/1:18,5:23:17.88:186,18,0	1/1:9,1:10:3.01:38,3,0	1/1:13,5:18:15.05:191,15,0	1/1:4,13:17:26.82:344,27,0	1/1:11,9:20:15.05:191,15,0	1/1:14,0:26:14.42:88,14,0	1/1:7,7:14:6.02:77,6,0	0/1:22,19:40:44.45:488,0,44	1/1:10,8:18:18.06:229,18,0	1/1:11,0:14:5.95:44,6,0	./.	1/1:14,0:13:0.47:1,0,0	1/1:11,0:18:2.89:21,3,0	1/1:11,1:12:3.01:38,3,0	1/1:19,18:37:45.08:548,45,0	0/0:11,0:11:3.01:0,3,56	1/1:12,4:16:8.99:96,9,0	1/1:21,0:35:17.76:134,18,0	1/1:12,5:17:15.05:191,15,0
chr10	32025636	.	ATG	A	1687.38	PASS	AB=0.899;AC=21;AF=0.375;AN=56;BaseQRankSum=-3.104;DP=682;FS=0.000;HRun=0;HaplotypeScore=137.2752;InbreedingCoeff=0.5554;MQ=62.25;MQ0=8;MQRankSum=0.523;QD=5.39;ReadPosRankSum=0.490;VQSLOD=2.8607;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,1:42:0.07:0,0,285	1/1:7,6:13:19.53:171,20,0	0/0:26,0:18:12.01:0,12,144	0/0:29,0:19:8.88:0,9,67	1/1:9,15:24:20.42:216,20,0	1/1:8,13:22:32.93:360,33,0	1/1:12,21:33:44.92:498,45,0	0/0:22,0:30:5.01:0,5,59	1/1:7,18:27:35.22:373,35,0	0/0:19,0:20:26.23:0,26,397	0/0:26,0:26:33.01:0,33,311	0/0:25,0:25:22.29:0,22,215	0/0:10,0:10:12.03:0,12,160	0/1:19,0:19:25.54:26,0,50	0/0:24,0:24:48.15:0,48,713	0/1:11,1:12:22.63:23,0,75	0/1:36,1:37:34.51:35,0,247	0/0:19,0:19:23.34:0,23,216	1/1:14,0:25:8.48:83,8,0	1/1:7,0:20:8.34:30,8,0	1/1:10,0:23:1.82:5,2,0	0/0:21,0:21:14.95:0,15,139	0/1:25,1:26:0.27:0,0,407	0/0:36,0:37:57.11:0,57,586	0/0:27,0:27:30.03:0,30,287	0/0:26,0:25:46.91:0,47,484	0/1:11,0:25:1.90:56,0,2	0/0:6,0:6:9.01:0,9,86
chr10	32025663	.	T	TGC	5536.86	PASS	AB=0.551;AC=25;AF=0.446;AN=56;BaseQRankSum=-6.584;DP=646;FS=4.943;HRun=0;HaplotypeScore=116.8188;InbreedingCoeff=0.5624;MQ=57.81;MQ0=17;MQRankSum=2.943;QD=15.73;ReadPosRankSum=5.406;VQSLOD=4.2991;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,34:43:3.59:466,4,0	0/0:12,0:10:22.78:0,23,177	0/0:20,0:11:27:0,27,257	0/0:19,0:8:20.96:0,21,173	0/0:23,0:23:33.05:0,33,258	0/0:27,0:27:68.91:0,69,569	0/0:29,0:29:51.41:0,51,425	0/0:23,0:22:56.92:0,57,501	0/0:29,0:29:56.02:0,56,420	1/1:4,17:20:32.87:476,33,0	0/1:3,19:23:1:389,0,1	0/1:5,16:21:14.63:249,0,15	1/1:13,0:13:23.75:200,24,0	1/1:1,18:19:8.21:118,8,0	0/0:23,0:22:36.69:0,37,646	1/1:2,13:16:1.70:110,2,0	1/1:8,24:31:1.92:365,2,0	0/1:3,15:18:21.66:353,0,22	0/0:24,0:22:52.39:0,52,417	0/0:20,0:19:33:0,33,301	0/0:27,0:24:8.98:0,9,81	0/1:4,17:22:8.01:145,0,8	1/1:21,9:30:32:716,32,0	0/1:8,29:37:6.25:677,0,6	1/1:3,20:22:2.68:395,3,0	1/1:4,20:23:36.77:713,37,0	0/0:18,0:18:36.24:0,36,281	1/1:0,8:8:9.03:164,9,0
chr10	32026026	.	TG	T	10392.59	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=12.363;DP=613;FS=3.751;HRun=8;HaplotypeScore=84.6952;InbreedingCoeff=0.9937;MQ=82.20;MQ0=0;MQRankSum=-3.485;QD=23.41;ReadPosRankSum=5.737;VQSLOD=5.1474;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,35:37:99:985,102,0	1/1:1,5:6:15.02:145,15,0	0/0:31,0:31:54.25:0,54,761	0/0:17,2:19:35.96:0,36,418	1/1:2,25:27:66.10:637,66,0	1/1:3,17:20:42.06:406,42,0	1/1:2,14:16:36.05:348,36,0	0/0:20,0:20:44.94:0,45,450	1/1:3,28:31:78.12:753,78,0	1/1:7,19:26:54.07:521,54,0	1/1:5,25:30:63.09:608,63,0	1/1:4,19:23:45.06:435,45,0	1/1:0,14:14:42.07:406,42,0	1/1:0,21:21:63.10:608,63,0	1/1:2,23:25:54.08:521,54,0	1/1:2,18:20:54.09:522,54,0	1/1:1,34:35:96.15:927,96,0	1/1:1,10:11:27.04:261,27,0	0/0:18,0:18:42.08:0,42,470	0/0:25,0:25:60.16:0,60,702	0/0:25,0:25:66.20:0,66,797	1/1:2,15:17:45.07:434,45,0	1/1:1,10:11:27.04:261,27,0	1/1:1,23:24:63.10:608,63,0	1/1:0,15:15:39.06:376,39,0	1/1:9,18:27:51.05:486,51,0	0/0:31,0:31:84.24:0,84,994	1/1:2,6:8:15.02:145,15,0
chr10	32026531	.	TTGTGTGTGTGTGTG	T	3012.81	PASS	AB=0.837;AC=32;AF=0.640;AN=50;BaseQRankSum=6.810;DP=458;FS=2.890;HRun=0;HaplotypeScore=169.9290;InbreedingCoeff=0.4823;MQ=59.40;MQ0=10;MQRankSum=-5.592;QD=11.00;ReadPosRankSum=-0.121;VQSLOD=2.5848;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:20,1:21:5.06:62,5,0	0/0:8,0:7:12.04:0,12,342	./.	./.	0/0:18,0:26:27.09:0,27,795	0/0:15,0:27:24.08:0,24,715	0/0:16,0:22:21.07:0,21,589	0/0:28,0:25:10.78:0,11,109	0/0:10,0:14:9.03:0,9,215	1/1:11,4:14:11.68:468,12,0	1/1:12,7:19:8.96:114,9,0	1/1:4,3:7:3.01:117,3,0	1/1:3,4:7:9.03:321,9,0	1/1:5,3:8:9.03:207,9,0	0/0:17,0:23:21.07:0,21,999	1/1:6,5:12:12.04:371,12,0	1/1:8,5:12:6.02:235,6,0	0/1:12,0:13:72.35:89,0,72	1/1:17,0:22:7.06:171,7,0	0/1:9,1:14:7.16:184,0,7	1/1:17,0:16:0.88:2,1,0	1/1:8,5:13:3.01:33,3,0	1/1:5,4:10:8.82:178,9,0	1/1:10,3:13:0.47:1,0,0	1/1:17,9:26:15.05:407,15,0	0/1:15,1:17:50.85:170,0,51	0/1:19,0:26:2.58:53,0,3	./.
chr10	32028291	.	AC	A	9688	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=16.962;DP=529;FS=2.299;HRun=1;HaplotypeScore=69.2018;InbreedingCoeff=0.9912;MQ=71.74;MQ0=0;MQRankSum=-1.631;QD=38.29;ReadPosRankSum=4.890;VQSLOD=5.3770;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,23:23:66.18:901,66,0	0/0:13,0:13:39.13:0,39,621	0/0:11,0:10:19.27:0,19,355	0/0:7,0:7:21.02:0,21,262	0/0:32,0:32:96.31:0,96,1501	0/0:23,0:23:69.22:0,69,1078	0/0:18,0:18:54.17:0,54,837	0/0:31,0:31:93.31:0,93,1462	0/0:16,0:16:48.16:0,48,754	1/1:0,28:28:84.28:1168,84,0	1/1:0,22:22:60.16:811,60,0	1/1:0,11:11:24.08:336,24,0	1/1:0,21:21:63.21:881,63,0	1/1:0,9:9:27.09:378,27,0	0/0:25,0:25:75.21:0,75,1166	1/1:0,6:6:15.05:210,15,0	1/1:0,25:25:63.21:881,63,0	1/1:0,7:7:21.07:294,21,0	0/0:23,0:23:69.22:0,69,1079	0/0:30,0:30:90.27:0,90,1359	0/0:24,0:24:72.23:0,72,1124	1/1:0,19:19:57.19:797,57,0	1/1:1,14:15:39.13:532,39,0	1/1:0,13:13:39.13:545,39,0	1/1:0,27:27:72.24:1006,72,0	1/1:0,20:20:57.18:781,57,0	0/0:23,0:23:69.18:0,69,1048	1/1:0,7:7:12.04:168,12,0
chr10	32028601	.	T	TA	3096.07	PASS	AB=0.529;AC=11;AF=0.196;AN=56;BaseQRankSum=-13.128;DP=435;FS=33.708;HRun=8;HaplotypeScore=50.4170;InbreedingCoeff=0.9030;MQ=82.70;MQ0=0;MQRankSum=2.627;QD=25.38;ReadPosRankSum=1.922;VQSLOD=1.7974;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:16:45:0,45,405	0/1:1,8:9:3.10:201,0,3	0/0:17,0:17:16.41:0,16,166	0/0:10,0:9:8.97:0,9,78	1/1:5,26:31:50.73:823,51,0	1/1:2,23:25:60.18:692,60,0	1/1:2,16:18:33.10:381,33,0	0/0:25,0:25:60:0,60,538	1/1:2,16:18:45.13:519,45,0	0/0:12,0:12:36.02:0,36,330	0/0:16,0:16:42.01:0,42,377	0/0:9,0:9:24.01:0,24,218	0/0:11,0:11:24.01:0,24,220	0/0:7,0:7:17.93:0,18,154	1/1:1,20:21:57.17:658,57,0	0/0:5,0:5:15.01:0,15,137	0/0:15,0:15:23.99:0,24,216	0/0:14,0:14:36.02:0,36,329	0/0:14,0:14:36.01:0,36,327	0/0:32,0:32:84.02:0,84,763	0/0:14,0:14:36.01:0,36,329	0/0:11,0:11:29.94:0,30,264	0/0:9,0:9:23.99:0,24,212	0/0:10,0:10:18.01:0,18,164	0/0:14,0:14:30.87:0,31,268	0/0:15,0:15:42.02:0,42,384	0/0:25,0:25:72.04:0,72,659	0/0:10,0:10:29.88:0,30,255
chr10	32028664	.	ATGCT	A	3969.82	PASS	AC=28;AF=0.519;AN=54;BaseQRankSum=12.198;DP=436;FS=229.768;HRun=0;HaplotypeScore=81.3504;InbreedingCoeff=0.9204;MQ=84.88;MQ0=0;MQRankSum=-12.785;QD=37.45;ReadPosRankSum=3.841;VQSLOD=-0.3059;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,2:4:6.02:110,6,0	0/0:11,0:11:33.11:0,33,891	0/0:17,0:17:44.18:0,44,989	0/0:15,0:15:35.96:0,36,799	0/0:44,0:44:99:0,117,3101	0/0:22,0:22:57.20:0,57,1503	0/0:27,0:27:75.26:0,75,1977	0/0:31,0:31:84.29:0,84,2269	0/0:24,0:24:66.23:0,66,1734	1/1:0,6:6:18.04:303,18,0	1/1:2,11:13:30.03:489,30,0	1/1:1,6:7:18.06:327,18,0	1/1:1,3:4:6.02:111,6,0	1/1:2,2:4:9.03:158,9,0	0/0:27,0:27:72.25:0,72,1872	1/1:3,3:6:9.03:165,9,0	1/1:1,5:6:6.02:111,6,0	1/1:0,5:5:12.04:221,12,0	0/0:19,0:19:51.17:0,51,1269	0/0:40,0:40:99:0,114,3062	0/0:17,0:17:51.16:0,51,1321	1/1:2,4:6:15.05:272,15,0	1/1:2,3:5:9.03:166,9,0	./.	1/1:2,7:10:24.08:434,24,0	1/1:5,14:19:42.14:770,42,0	0/0:32,0:32:96.33:0,96,2553	1/1:5,6:11:18.06:332,18,0
chr10	32029016	.	CT	C	3891.24	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=12.050;DP=437;FS=4.385;HRun=6;HaplotypeScore=75.3039;InbreedingCoeff=0.9386;MQ=77.13;MQ0=3;MQRankSum=-8.142;QD=25.77;ReadPosRankSum=1.830;VQSLOD=4.1806;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,15:16:36.09:387,36,0	0/0:8,0:8:21.07:0,21,276	0/0:27,0:20:45.04:0,45,566	0/0:26,0:10:9.51:0,10,184	0/0:27,0:27:54.17:0,54,709	0/0:21,0:21:57.19:0,57,750	0/0:19,0:19:54.10:0,54,648	0/0:27,0:27:66.17:0,66,837	0/0:15,0:15:32.92:0,33,423	1/1:3,18:21:51.11:540,51,0	1/1:0,11:11:27.07:290,27,0	1/1:2,8:10:24.06:258,24,0	1/1:1,7:8:21.05:226,21,0	1/1:2,12:14:36.09:387,36,0	0/0:25,0:25:65.89:0,66,833	1/1:1,3:4:9.02:97,9,0	1/1:1,7:8:15.04:161,15,0	1/1:1,7:8:21.05:226,21,0	0/0:19,0:19:54.17:0,54,697	0/0:30,0:30:78.23:0,78,997	0/0:9,0:9:18.06:0,18,236	1/1:1,6:7:15.04:161,15,0	1/1:0,11:11:30.08:322,30,0	1/1:0,3:3:6.01:64,6,0	1/1:0,2:2:3.01:32,3,0	1/1:4,16:19:45.11:484,45,0	0/0:31,0:31:75.12:0,75,967	1/1:0,8:8:24.06:258,24,0
chr10	32029734	.	CCTTCCTTCTTTCCTTT	C	9485.49	PASS	AB=0.982;AC=33;AF=0.589;AN=56;BaseQRankSum=-3.784;DP=644;FS=8.194;HRun=0;HaplotypeScore=324.1898;InbreedingCoeff=-0.4684;MQ=47.41;MQ0=9;MQRankSum=-1.249;QD=15.20;ReadPosRankSum=5.575;VQSLOD=2.0795;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:13,0:13:8.22:191,0,8	0/1:10,2:12:99:544,0,302	0/0:9,0:3:5.99:0,6,90	0/0:11,0:5:5.96:0,6,44	0/1:30,5:35:99:838,0,311	0/1:30,1:31:99:464,0,275	1/1:21,1:18:12.30:609,12,0	0/1:32,0:29:18.07:373,0,18	0/1:23,0:23:99:631,0,346	1/1:35,0:34:10.53:861,11,0	0/1:29,0:29:35.98:358,0,36	1/1:21,0:21:8.61:228,9,0	0/1:32,0:31:53.25:363,0,53	0/1:24,0:24:25.36:563,0,25	0/1:25,0:25:99:420,0,421	0/1:20,1:21:29.91:536,0,30	1/1:18,0:18:8.98:172,9,0	0/1:16,0:15:72.61:195,0,73	0/1:13,0:13:4.82:5,0,859	0/1:24,0:24:25.55:26,0,564	0/1:12,0:11:32.03:32,0,745	0/1:38,0:38:45.46:299,0,45	0/1:34,0:34:24.59:529,0,25	1/1:19,0:19:6.02:194,6,0	1/1:21,0:21:5.95:192,6,0	0/1:35,0:35:18.19:726,0,18	0/1:28,0:26:41.09:41,0,1150	1/1:11,0:11:2.95:96,3,0
chr10	32029735	.	C	CT	187.39	PASS	AB=0.863;AC=2;AF=0.036;AN=56;BaseQRankSum=4.822;DP=642;FS=1.791;HRun=2;HaplotypeScore=229.6244;InbreedingCoeff=-0.0565;MQ=47.09;MQ0=9;MQRankSum=-5.062;QD=3.60;ReadPosRankSum=-1.541;VQSLOD=-0.4027;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:31.79:0,32,329	0/0:12,0:12:36.11:0,36,434	0/0:9,0:3:8.24:0,8,76	0/0:10,0:4:12.04:0,12,148	0/0:35,0:35:75.16:0,75,854	0/0:30,0:30:60.17:0,60,715	0/0:24,0:20:46.01:0,46,533	0/0:30,1:28:66.15:0,66,773	0/0:23,0:23:66.13:0,66,781	0/0:34,0:33:56.72:0,57,482	0/0:29,0:29:19.92:0,20,225	0/0:21,0:21:2.24:0,2,26	0/0:31,0:30:32.87:0,33,293	0/0:25,0:25:26.94:0,27,248	0/0:24,0:24:54.07:0,54,607	0/0:21,0:21:18.93:0,19,215	0/0:18,0:18:15.02:0,15,153	0/0:16,0:15:32.12:0,32,356	0/0:12,1:13:13.69:0,14,401	0/1:23,0:23:77.91:78,0,237	0/0:12,0:11:11.75:0,12,335	0/0:38,0:38:31.33:0,31,333	0/0:33,0:33:25.23:0,25,284	0/0:19,0:19:6:0,6,55	0/0:21,0:21:11.95:0,12,94	0/0:34,0:34:58.97:0,59,522	0/1:18,11:27:99:198,0,360	0/0:11,0:11:11.95:0,12,94
chr10	32029745	.	TCCTTTCTTCCTTCCTTCCTTCTTTC	T	15175.51	PASS	AB=0.908;AC=38;AF=0.679;AN=56;BaseQRankSum=0.325;DP=601;FS=19.075;HRun=0;HaplotypeScore=357.8635;InbreedingCoeff=0.1745;MQ=44.47;MQ0=9;MQRankSum=0.640;QD=28.37;ReadPosRankSum=-0.429;VQSLOD=2.1035;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:7,1:18:33.04:866,33,0	0/1:15,0:15:61.23:61,0,721	0/0:10,0:3:9.03:0,9,282	0/0:10,0:3:2.16:0,2,129	0/1:35,0:35:99:111,0,929	0/1:25,0:25:69.30:69,0,720	0/1:24,0:20:86.72:87,0,106	0/0:25,0:21:47.21:0,47,569	0/1:19,0:19:63.91:64,0,800	1/1:0,33:33:93.15:2579,93,0	1/1:2,27:29:38.96:1086,39,0	1/1:0,21:21:8.90:527,9,0	1/1:2,23:24:12.04:825,12,0	1/1:2,21:23:21.07:1309,21,0	0/1:19,0:19:7.85:8,0,1224	1/1:3,19:22:18.06:1029,18,0	1/1:2,16:19:9.03:336,9,0	1/1:11,0:14:1.07:405,1,0	0/0:9,0:9:27.01:0,27,1653	0/1:7,0:18:99:147,0,992	0/0:9,0:10:0.95:0,1,1451	1/1:0,35:35:45.06:1049,45,0	1/1:0,32:32:24.45:1303,24,0	1/1:0,19:19:6.02:412,6,0	1/1:0,21:21:6.02:412,6,0	1/1:1,29:30:75.23:2188,75,0	0/1:14,0:29:96.13:96,0,2331	1/1:1,6:6:3.01:206,3,0
chr10	32029752	.	TTCC	T	3001.07	PASS	AB=0.985;AC=27;AF=0.482;AN=56;BaseQRankSum=5.680;DP=593;FS=16.587;HRun=0;HaplotypeScore=235.5307;InbreedingCoeff=-0.5407;MQ=43.50;MQ0=7;MQRankSum=-6.744;QD=5.64;ReadPosRankSum=0.504;VQSLOD=0.7029;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:17,3:20:32.63:71,0,33	0/1:15,0:15:68.40:289,0,68	0/0:10,0:3:9.03:0,9,173	0/0:7,0:1:3.01:0,3,71	0/1:33,0:33:59.28:530,0,59	0/1:24,0:24:26.18:442,0,26	0/1:21,0:17:99:285,0,151	0/0:21,2:19:48.38:0,48,547	0/1:17,0:17:27.65:427,0,28	0/1:33,0:33:80.52:81,0,421	0/1:28,0:28:42.79:43,0,112	0/1:22,0:22:30.26:30,0,40	0/1:25,0:24:6.73:70,0,7	0/1:24,0:24:47.78:103,0,48	0/0:21,0:21:23.85:0,24,170	0/1:20,0:20:2.51:68,0,3	0/1:18,1:19:33.73:34,0,42	0/1:15,1:16:63.97:64,0,121	0/1:10,0:9:13.82:14,0,362	0/1:20,1:21:99:150,0,188	0/1:9,0:9:12.37:12,0,410	0/1:35,0:35:31.91:32,0,125	0/1:33,0:33:57.45:82,0,57	1/1:19,0:19:5.95:42,6,0	1/1:21,0:21:5.95:42,6,0	0/1:29,0:29:26.89:27,0,456	0/1:29,1:28:99:200,0,339	1/1:7,0:6:2.98:21,3,0
chr10	32029757	.	TCC	T	1267.84	PASS	AB=0.869;AC=19;AF=0.339;AN=56;BaseQRankSum=5.584;DP=592;FS=5.097;HRun=2;HaplotypeScore=232.7247;InbreedingCoeff=-0.1540;MQ=43.29;MQ0=6;MQRankSum=-4.841;QD=3.55;ReadPosRankSum=5.947;VQSLOD=-0.4685;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:7.23:0,7,160	0/1:6,7:13:99:165,0,142	0/0:11,0:3:6.02:0,6,122	0/0:8,0:1:3.01:0,3,61	0/1:19,14:33:99:306,0,210	0/1:12,10:22:99:248,0,108	0/1:10,11:17:99:154,0,221	0/0:25,0:21:59.45:0,59,869	0/1:5,10:15:61.05:246,0,61	0/0:33,0:33:11.44:0,11,715	0/1:28,0:28:15.57:16,0,196	0/1:22,0:22:16.11:16,0,63	0/1:25,0:24:41.61:42,0,44	0/1:24,0:24:60.96:61,0,93	0/0:24,0:24:42.49:0,42,296	0/1:20,0:20:29.97:39,0,30	0/1:19,0:19:13.54:14,0,56	0/0:17,0:16:7.18:0,7,274	0/0:11,0:10:29.52:0,30,462	0/0:20,0:20:56.46:0,56,529	0/0:9,0:9:20.66:0,21,376	0/1:35,0:35:7.26:7,0,207	0/1:33,0:33:46.79:47,0,116	1/1:19,0:19:5.68:28,6,0	1/1:21,0:21:5.68:28,6,0	0/0:29,0:29:36.78:0,37,726	0/0:28,0:27:73.99:0,74,722	1/1:7,0:6:2.84:14,3,0
chr10	32029761	.	TC	T	692.11	PASS	AB=0.806;AC=25;AF=0.446;AN=56;BaseQRankSum=6.552;DP=589;FS=6.360;HRun=2;HaplotypeScore=225.6256;InbreedingCoeff=0.2546;MQ=43.65;MQ0=6;MQRankSum=-3.371;QD=1.85;ReadPosRankSum=6.189;VQSLOD=-0.5992;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:4.09:0,4,39	0/1:5,7:12:70.11:95,0,70	0/0:12,0:4:12.03:0,12,154	0/0:9,0:2:6:0,6,69	0/1:15,14:29:99:146,0,101	0/1:11,10:21:34.69:142,0,35	0/1:11,11:18:99:105,0,185	0/0:25,0:21:60.76:0,61,750	0/1:5,10:15:33.39:135,0,33	0/0:33,0:33:13.83:0,14,176	1/1:28,0:28:7.81:27,8,0	0/1:22,0:22:5.72:6,0,18	1/1:25,0:24:6.76:25,7,0	1/1:24,0:24:12.31:41,12,0	0/1:23,0:23:6.82:7,0,120	0/1:20,0:20:9.41:19,0,9	0/1:19,0:19:0.29:29,0,0	0/0:17,0:16:9.82:0,10,101	0/0:12,0:11:28.17:0,28,339	0/0:20,0:20:41.67:0,42,305	0/0:9,0:9:17.26:0,17,268	1/1:35,0:35:5.48:18,5,0	1/1:33,0:33:11.98:39,12,0	1/1:19,0:19:4.44:14,4,0	1/1:21,0:21:4.44:14,4,0	0/0:29,0:29:15.25:0,15,137	0/0:27,0:26:60.75:0,61,440	1/1:7,0:6:2.22:7,2,0
chr10	32029766	.	CT	C	2528.55	PASS	AB=0.968;AC=38;AF=0.679;AN=56;BaseQRankSum=6.243;DP=609;FS=9.401;HRun=3;HaplotypeScore=219.6901;InbreedingCoeff=-0.0611;MQ=44.01;MQ0=6;MQRankSum=-0.971;QD=4.57;ReadPosRankSum=3.768;VQSLOD=-0.3857;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:22:14.42:90,14,0	0/1:12,0:12:91.15:91,0,106	0/0:15,0:5:11.65:0,12,172	0/0:10,0:3:6.02:0,6,86	0/1:30,0:30:96.47:221,0,96	0/1:21,0:21:18.55:148,0,19	0/1:25,0:21:99:142,0,169	0/0:30,0:26:13.37:0,13,721	0/1:20,0:20:18.56:239,0,19	1/1:33,0:33:61.16:308,61,0	1/1:28,0:28:27.69:150,28,0	1/1:22,0:22:10.88:56,11,0	1/1:25,0:24:12.26:47,12,0	1/1:24,0:24:20.22:85,20,0	0/1:9,14:23:74.68:184,0,75	0/1:20,0:20:14.40:35,0,14	1/1:19,0:19:10.37:64,10,0	0/1:14,0:13:35.35:40,0,35	0/1:14,0:13:51.65:52,0,265	0/1:21,0:21:63.41:93,0,63	0/1:10,0:10:18.14:18,0,234	1/1:35,0:35:30.92:172,31,0	1/1:33,0:33:21.30:95,21,0	1/1:19,0:19:4.59:15,5,0	1/1:21,0:21:4.59:15,5,0	1/1:29,0:29:43.22:244,43,0	0/1:26,0:25:88.41:88,0,143	1/1:7,0:6:2.22:7,2,0
chr10	32029769	.	TC	T	6763.65	PASS	AB=0.697;AC=42;AF=0.750;AN=56;BaseQRankSum=6.139;DP=610;FS=13.482;HRun=2;HaplotypeScore=203.6716;InbreedingCoeff=-0.0373;MQ=44.20;MQ0=6;MQRankSum=-0.860;QD=11.87;ReadPosRankSum=5.116;VQSLOD=1.9881;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:20,3:23:20.05:212,20,0	0/1:4,7:11:16.81:230,0,17	0/0:17,0:5:11.65:0,12,178	0/1:9,1:4:14.33:14,0,79	0/1:17,14:31:22.85:509,0,23	1/1:13,10:23:28.19:378,28,0	0/1:7,17:20:99:385,0,129	0/1:20,10:26:99:147,0,681	1/1:2,17:19:35.92:617,36,0	1/1:33,0:33:74.93:850,75,0	1/1:28,0:28:32.86:334,33,0	1/1:21,1:22:11.96:122,12,0	1/1:25,0:24:14.78:108,15,0	1/1:24,0:24:23.53:175,24,0	0/0:23,0:23:3.50:0,4,127	1/1:20,0:20:5.47:97,5,0	1/1:18,1:19:11.79:92,12,0	0/1:12,2:13:3.44:129,0,3	0/1:8,6:13:99:181,0,266	0/1:3,17:20:32.65:384,0,33	0/1:6,4:10:70.94:71,0,202	1/1:35,0:35:32.96:359,33,0	1/1:33,0:33:27.59:228,28,0	1/1:19,0:19:5.87:35,6,0	1/1:21,0:21:5.88:36,6,0	1/1:29,0:29:57.44:634,57,0	0/1:8,18:25:99:418,0,110	1/1:7,0:6:2.96:19,3,0
chr10	32029770	.	C	CTTT	9184.59	PASS	AB=0.992;AC=45;AF=0.804;AN=56;BaseQRankSum=5.416;DP=615;FS=4.001;HRun=3;HaplotypeScore=210.9482;InbreedingCoeff=-0.0802;MQ=44.39;MQ0=6;MQRankSum=-0.454;QD=15.36;ReadPosRankSum=5.853;VQSLOD=1.6892;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,19:24:20.01:276,20,0	0/1:11,0:11:9.75:193,0,10	0/0:17,0:5:9.06:0,9,196	0/1:10,0:4:14.33:14,0,89	0/1:31,0:31:19.98:547,0,20	1/1:23,0:23:31.35:360,31,0	0/1:25,0:21:99:370,0,129	0/1:29,0:25:99:231,0,678	1/1:19,0:19:35.79:570,36,0	1/1:33,0:33:73.50:1345,73,0	1/1:28,0:28:31.15:471,31,0	1/1:22,0:22:11.40:149,11,0	1/1:23,1:24:12.62:104,13,0	1/1:22,2:24:17.68:180,18,0	1/1:23,0:23:4.12:355,4,0	1/1:20,0:20:2.52:73,3,0	1/1:19,1:20:11.02:125,11,0	1/1:5,10:14:14.40:198,14,0	0/1:15,0:14:99:280,0,228	0/1:21,0:21:31.95:685,0,32	0/1:10,0:10:69.45:69,0,201	1/1:35,0:35:31.68:541,32,0	1/1:32,1:33:24.29:254,24,0	1/1:19,0:19:4.26:13,4,0	1/1:21,0:21:4.87:17,5,0	1/1:30,0:30:56.60:1044,57,0	0/1:24,1:25:99:713,0,109	1/1:7,0:6:2.22:7,2,0
chr10	32029778	.	T	TCTTC	3179.19	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=0.715;DP=619;FS=2.780;HRun=0;HaplotypeScore=234.5116;InbreedingCoeff=0.2199;MQ=45.77;MQ0=3;MQRankSum=-1.280;QD=10.22;ReadPosRankSum=4.719;VQSLOD=3.0074;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:5.41:0,5,43	1/1:12,0:12:29.90:431,30,0	0/0:17,0:8:20.71:0,21,234	0/1:8,0:4:13.39:13,0,98	1/1:21,15:38:45.99:908,46,0	1/1:11,13:24:36.06:528,36,0	0/1:27,0:23:0.36:557,0,0	0/0:28,0:25:56.34:0,56,399	1/1:22,0:22:60.12:812,60,0	0/1:30,0:30:10.03:10,0,199	0/1:24,0:24:13.13:13,0,105	0/0:20,0:20:12.55:0,13,97	0/0:25,0:25:5.18:0,5,168	0/0:24,0:24:2.66:0,3,267	0/1:23,0:23:10.45:10,0,287	0/0:20,0:20:17.72:0,18,212	0/0:23,0:23:3.04:0,3,118	0/1:16,0:15:0.66:1,0,66	0/0:16,0:15:1.26:0,1,152	0/1:25,0:25:3.31:3,0,125	0/0:9,0:9:12.41:0,12,106	0/1:33,0:33:42.68:43,0,138	0/0:30,0:30:7.45:0,7,206	0/0:17,0:17:6.02:0,6,76	0/0:21,0:21:12.02:0,12,131	0/1:29,0:29:17.30:17,0,151	0/0:26,0:25:10.94:0,11,90	0/0:8,0:8:12:0,12,118
chr10	32032905	.	CAT	C	2235.61	PASS	AB=0.841;AC=40;AF=0.870;AN=46;BaseQRankSum=2.493;DP=217;FS=2.019;HRun=0;HaplotypeScore=76.8879;InbreedingCoeff=0.2232;MQ=66.72;MQ0=6;MQRankSum=-0.481;QD=12.56;ReadPosRankSum=1.530;VQSLOD=3.4491;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:8,6:15:9.93:150,0,10	1/1:3,0:3:5.60:27,6,0	1/1:8,0:6:2.84:14,3,0	./.	1/1:8,0:8:5.60:26,6,0	0/1:9,0:9:10.74:39,0,11	0/0:2,0:2:0:0,0,0	0/0:12,0:10:6.82:0,7,42	./.	1/1:4,6:10:24.02:224,24,0	1/1:7,10:17:35.94:301,36,0	1/1:4,4:7:14.98:130,15,0	1/1:1,5:6:11.97:99,12,0	1/1:6,3:9:11.99:106,12,0	1/1:6,0:6:5.39:24,5,0	1/1:8,3:11:15:139,15,0	1/1:8,0:8:12.03:125,12,0	1/1:2,1:3:3:27,3,0	./.	./.	./.	1/1:5,2:7:8.99:80,9,0	1/1:4,1:5:6:54,6,0	1/1:8,0:8:3.01:30,3,0	1/1:4,15:19:53.95:475,54,0	1/1:6,6:12:13.25:243,13,0	1/1:3,0:3:0.47:1,0,0	1/1:2,1:3:3:28,3,0
chr10	32032912	.	ATATATATATATG	A	6353.39	PASS	AB=1.000;AC=45;AF=0.938;AN=48;BaseQRankSum=3.666;DP=195;FS=18.890;HRun=0;HaplotypeScore=93.5880;InbreedingCoeff=0.1892;MQ=53.31;MQ0=7;MQRankSum=-1.621;QD=36.51;ReadPosRankSum=4.142;VQSLOD=2.6684;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:14:23.13:379,23,0	1/1:3,0:3:6.02:172,6,0	1/1:7,0:2:1.55:4,2,0	0/0:18,0:4:2.04:0,2,6	1/1:1,5:6:6.02:216,6,0	1/1:2,9:11:12.04:410,12,0	1/1:1,0:1:2.99:24,3,0	0/1:13,0:11:7.39:7,0,490	./.	1/1:10,0:10:23.81:534,24,0	1/1:15,0:15:35.85:873,36,0	1/1:5,0:5:14.92:352,15,0	1/1:6,0:6:12.04:337,12,0	1/1:9,0:9:11.91:268,12,0	1/1:3,0:3:6.02:166,6,0	1/1:10,0:10:14.78:283,15,0	1/1:6,0:6:10.46:45,10,0	1/1:3,0:3:3.01:84,3,0	./.	./.	./.	1/1:6,0:6:8.90:183,9,0	1/1:4,0:4:5.89:99,6,0	1/1:6,0:6:2.84:14,3,0	1/1:18,0:18:53.58:1300,54,0	1/1:11,0:11:25.49:471,25,0	1/1:3,0:3:5.99:49,6,0	1/1:3,0:2:3.01:84,3,0
chr10	32032924	.	GTATATATATATATATA	G	9280.12	PASS	AB=1.000;AC=38;AF=0.760;AN=50;BaseQRankSum=4.215;DP=218;FS=21.556;HRun=0;HaplotypeScore=118.8304;InbreedingCoeff=0.5107;MQ=55.88;MQ0=7;MQRankSum=-4.483;QD=56.59;ReadPosRankSum=4.374;VQSLOD=2.5215;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:2,9:11:23.76:663,24,0	0/1:4,0:4:62.53:164,0,63	0/0:9,0:3:2.92:0,3,17	0/0:23,0:8:9.77:0,10,72	1/1:5,0:5:5.88:36,6,0	0/1:11,0:11:10.17:92,0,10	0/0:3,0:3:0.47:0,0,1	0/0:16,0:14:36.89:0,37,1226	1/1:1,0:1:0.47:1,0,0	1/1:4,6:10:29.73:859,30,0	1/1:5,10:15:35.30:1295,35,0	1/1:4,4:8:17.78:550,18,0	1/1:1,5:6:12.04:514,12,0	1/1:6,3:9:14.77:422,15,0	1/1:4,0:4:6.02:202,6,0	1/1:6,3:9:14.52:411,15,0	1/1:8,0:9:17.28:188,17,0	1/1:3,1:4:6.02:177,6,0	./.	./.	./.	1/1:2,2:4:8.62:266,9,0	1/1:3,1:4:6.08:138,6,0	1/1:6,0:6:2.50:9,2,0	1/1:10,15:25:62.66:2113,63,0	1/1:8,5:16:44.47:965,44,0	0/0:3,0:3:8.79:0,9,63	1/1:1,1:3:6.02:215,6,0
chr10	32036223	.	TTGTGTG	T	5133.76	PASS	AB=1.000;AC=34;AF=0.607;AN=56;BaseQRankSum=-4.388;DP=588;FS=0.655;HRun=0;HaplotypeScore=146.0397;InbreedingCoeff=0.5729;MQ=68.19;MQ0=9;MQRankSum=1.109;QD=13.47;ReadPosRankSum=3.425;VQSLOD=4.2404;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:40,0:40:38.37:421,38,0	0/0:9,0:9:4.77:0,5,14	0/0:27,0:20:5.95:0,6,62	0/0:28,0:24:6.01:0,6,70	0/0:25,0:25:24.45:0,24,195	0/0:27,0:27:19.37:0,19,308	0/0:27,0:27:4.76:0,5,31	1/1:22,0:21:6.29:92,6,0	0/0:22,0:22:11.97:0,12,136	1/1:23,0:23:5.86:284,6,0	1/1:11,0:11:8.84:84,9,0	1/1:14,0:13:14.74:134,15,0	1/1:16,1:17:18.01:246,18,0	0/1:12,0:12:4.71:157,0,5	0/0:22,0:22:15.92:0,16,300	1/1:15,0:14:15.03:208,15,0	1/1:25,2:27:52.03:584,52,0	0/1:20,0:20:43.45:78,0,43	0/1:16,0:15:17.75:28,0,18	1/1:16,0:15:15.37:152,15,0	0/1:31,0:28:8.50:166,0,9	1/1:13,1:13:19.76:196,20,0	0/0:13,7:20:2.50:0,2,9	1/1:20,0:20:39.11:571,39,0	1/1:19,1:20:30.88:353,31,0	1/1:30,0:28:37.36:497,37,0	1/1:20,0:21:33.75:479,34,0	1/1:11,1:12:20.09:404,20,0
chr10	32036256	.	TGA	T	7418.10	PASS	AB=0.862;AC=49;AF=0.907;AN=54;BaseQRankSum=1.045;DP=599;FS=2.526;HRun=0;HaplotypeScore=132.1694;InbreedingCoeff=0.2093;MQ=50.24;MQ0=31;MQRankSum=7.488;QD=12.49;ReadPosRankSum=0.948;VQSLOD=4.9637;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:46,0:45:66.72:523,67,0	1/1:11,0:11:24.08:160,24,0	0/0:2,0:1:2.97:0,3,20	./.	1/1:27,0:25:45.47:271,45,0	1/1:26,0:26:37.71:275,38,0	1/1:31,0:31:35.15:257,35,0	0/1:16,0:13:26.67:105,0,27	1/1:25,0:25:31.48:203,31,0	0/1:8,19:25:7.20:347,0,7	1/1:17,0:16:38.90:316,39,0	1/1:21,0:20:36.29:278,36,0	1/1:16,0:16:35.42:279,35,0	1/1:19,0:17:25.63:227,26,0	1/1:18,0:15:17.89:155,18,0	1/1:17,0:16:38.95:322,39,0	1/1:32,0:32:66.89:573,67,0	1/1:17,0:18:19:204,19,0	0/1:14,0:12:38.22:107,0,38	1/1:17,0:16:9.37:71,9,0	1/1:35,0:27:32.86:256,33,0	1/1:25,0:24:17.76:143,18,0	1/1:13,0:13:14.92:113,15,0	1/1:27,0:27:65.79:528,66,0	1/1:26,0:26:59.13:498,59,0	1/1:3,30:32:65.62:597,66,0	1/1:19,0:19:50.65:395,51,0	1/1:18,0:15:12.10:214,12,0
chr10	32036258	.	AGTGTGT	A	4852.55	PASS	AB=0.989;AC=27;AF=0.519;AN=52;BaseQRankSum=-7.507;DP=604;FS=69.713;HRun=0;HaplotypeScore=177.7892;InbreedingCoeff=0.4751;MQ=50.14;MQ0=33;MQRankSum=3.272;QD=13.26;ReadPosRankSum=-4.503;VQSLOD=0.2892;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:47,0:46:1.12:475,1,0	0/0:10,0:11:10.86:0,11,86	./.	./.	0/0:26,0:23:25.89:0,26,161	0/0:26,0:27:36:0,36,315	0/0:30,0:31:5.97:0,6,33	0/0:17,0:14:11.24:0,11,50	0/0:25,0:25:20.45:0,20,162	1/1:26,0:24:6.81:329,7,0	1/1:18,0:17:9.73:373,10,0	1/1:21,1:21:27.88:344,28,0	1/1:14,1:15:8.14:234,8,0	0/1:20,0:18:2.85:227,0,3	0/0:16,0:13:23.01:0,23,261	1/1:18,0:17:29.83:384,30,0	1/1:32,2:34:18.54:531,19,0	0/1:18,0:18:54.39:250,0,54	0/1:14,0:12:8.49:109,0,8	0/0:10,0:17:0:0,0,0	0/0:35,0:27:7.41:0,7,69	0/0:11,14:24:2.79:0,3,24	0/1:12,0:12:9.70:157,0,10	1/1:27,0:27:11.11:286,11,0	1/1:26,1:27:39.93:536,40,0	1/1:33,0:32:33.85:458,34,0	0/1:17,0:18:31.49:72,0,31	1/1:16,0:14:5.95:87,6,0
chr10	32037539	.	CT	C	10463.16	PASS	AB=0.933;AC=53;AF=0.946;AN=56;BaseQRankSum=-3.989;DP=472;FS=1.035;HRun=9;HaplotypeScore=51.0417;InbreedingCoeff=0.5692;MQ=76.77;MQ0=0;MQRankSum=-4.753;QD=22.60;ReadPosRankSum=4.026;VQSLOD=5.4298;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,17:17:48.03:439,48,0	1/1:0,5:5:15.01:137,15,0	0/1:13,0:14:22.15:22,0,190	0/0:9,0:9:13.59:0,14,138	1/1:1,28:29:77.89:691,78,0	1/1:0,23:23:66.04:604,66,0	1/1:1,13:14:38.24:336,38,0	1/1:4,22:26:65.98:591,66,0	1/1:1,9:10:27.01:247,27,0	1/1:2,22:24:66.03:603,66,0	1/1:2,37:39:99:967,108,0	1/1:0,11:11:33.02:302,33,0	1/1:0,16:16:39.02:357,39,0	1/1:0,10:10:30.02:275,30,0	1/1:3,11:14:33.02:302,33,0	1/1:0,15:15:33.02:302,33,0	1/1:4,20:24:7.17:458,7,0	1/1:1,7:8:18.01:163,18,0	1/1:4,11:15:33.01:302,33,0	1/1:3,22:25:65.89:577,66,0	1/1:0,5:5:12.01:110,12,0	1/1:2,17:19:44.93:395,45,0	1/1:3,12:15:33.02:302,33,0	1/1:0,7:7:21.01:192,21,0	1/1:1,14:15:39.02:357,39,0	1/1:3,19:22:57.02:518,57,0	1/1:5,25:30:70.85:636,71,0	1/1:1,10:11:30.02:275,30,0
chr10	32038768	.	AG	A	6554.40	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=11.892;DP=651;FS=6.561;HRun=5;HaplotypeScore=63.4681;InbreedingCoeff=0.9939;MQ=69.26;MQ0=0;MQRankSum=-0.694;QD=28.87;ReadPosRankSum=2.614;VQSLOD=5.3979;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:51:99:0,147,1925	1/1:0,6:6:18.01:190,18,0	0/0:34,0:31:83.40:0,83,1155	0/0:36,0:36:87.24:0,87,1151	1/1:3,27:30:81.10:874,81,0	1/1:1,19:20:51.15:579,51,0	1/1:1,11:12:24.07:272,24,0	1/1:2,26:28:75.18:832,75,0	1/1:1,19:20:57.16:647,57,0	0/0:37,0:37:99:0,108,1421	0/0:22,0:22:63.19:0,63,843	0/0:16,0:16:48.14:0,48,638	0/0:20,0:20:51.17:0,51,696	0/0:19,0:19:50.96:0,51,669	0/0:23,0:23:66.19:0,66,870	0/0:23,0:23:69.21:0,69,915	0/0:33,0:33:93.31:0,93,1270	0/0:14,0:14:42.11:0,42,537	1/1:3,15:18:45.06:474,45,0	1/1:1,25:26:66.19:747,66,0	1/1:3,43:46:99:1293,114,0	0/0:22,0:22:57.16:0,57,745	0/0:19,0:19:51.13:0,51,649	0/0:13,0:13:36.12:0,36,492	0/0:14,0:14:39.08:0,39,487	0/0:22,0:22:66.22:0,66,900	1/1:1,20:21:57.16:646,57,0	0/0:5,0:5:12.04:0,12,163
chr10	32039494	.	T	TGTCACCACACCTGATCTGTACTC	2696.30	PASS	AB=0.733;AC=26;AF=0.929;AN=28;BaseQRankSum=-2.751;DP=44;FS=8.098;HRun=0;HaplotypeScore=39.3070;InbreedingCoeff=-0.2291;MQ=116.00;MQ0=0;MQRankSum=-1.661;QD=65.76;ReadPosRankSum=-1.142;VQSLOD=0.9566;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,0:2:3.01:49,3,0	./.	0/1:4,0:8:39.69:874,0,40	0/1:6,1:8:23.04:831,0,23	1/1:1,0:1:3.01:102,3,0	./.	1/1:1,0:1:2.99:24,3,0	1/1:2,0:2:3:26,3,0	./.	1/1:2,0:2:6.02:177,6,0	1/1:2,0:2:5.98:140,6,0	./.	1/1:2,0:2:3.01:38,3,0	./.	./.	./.	1/1:3,0:3:2.98:22,3,0	./.	1/1:1,0:1:3:26,3,0	1/1:1,0:1:3.01:120,3,0	1/1:5,0:5:8.97:104,9,0	./.	./.	./.	1/1:3,0:3:9.02:250,9,0	./.	./.	./.
chr10	32039877	.	A	AG	3462.11	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=8.655;DP=433;FS=63.328;HRun=1;HaplotypeScore=92.9098;InbreedingCoeff=0.9948;MQ=86.87;MQ0=2;MQRankSum=-3.257;QD=22.19;ReadPosRankSum=3.729;VQSLOD=-0.1797;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:47.93:0,48,460	1/1:1,5:6:15.05:207,15,0	0/0:34,0:28:28.35:0,28,481	0/0:27,0:20:39.57:0,40,334	1/1:6,11:17:45.13:590,45,0	1/1:5,15:20:56.50:588,56,0	1/1:10,5:15:34.83:366,35,0	1/1:20,0:20:56.66:362,57,0	1/1:0,14:14:39.01:428,39,0	0/0:15,0:15:32.95:0,33,316	0/0:10,0:10:30.04:0,30,330	0/0:13,0:13:25.93:0,26,206	0/0:12,0:12:26.18:0,26,226	0/0:15,0:15:33.05:0,33,366	0/0:17,0:17:45.14:0,45,540	0/0:12,0:12:31.94:0,32,227	0/0:14,0:14:32.73:0,33,282	0/0:11,0:10:26.77:0,27,209	1/1:12,0:12:31.12:172,31,0	1/1:15,0:15:37.38:219,37,0	1/1:21,0:21:58.22:346,58,0	0/0:12,0:12:36.02:0,36,398	0/0:14,0:14:16.90:0,17,302	0/0:10,0:10:26.91:0,27,271	0/0:14,0:14:32.93:0,33,302	0/0:17,0:17:39.82:0,40,348	1/1:16,0:14:37.52:185,38,0	0/0:13,0:13:39.10:0,39,470
chr10	32039887	.	TTG	T	2775.32	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=7.207;DP=495;FS=0.861;HRun=0;HaplotypeScore=100.5670;InbreedingCoeff=0.6118;MQ=78.93;MQ0=2;MQRankSum=-2.142;QD=16.82;ReadPosRankSum=5.946;VQSLOD=3.4167;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:51.27:0,51,476	0/1:8,0:8:7.91:12,0,8	0/0:39,0:29:36.63:0,37,458	0/0:27,0:21:45.80:0,46,467	0/1:18,0:18:32.07:37,0,32	0/1:21,0:21:25.21:45,0,25	0/1:13,0:13:21.33:21,0,32	1/1:1,18:19:41.03:555,41,0	0/1:16,0:16:0.84:41,0,1	0/0:14,0:14:27.92:0,28,310	0/0:12,0:12:32.99:0,33,369	0/0:16,0:16:45.37:0,45,407	0/0:11,0:11:32.99:0,33,320	0/0:20,0:20:51.10:0,51,553	0/0:22,0:22:37.23:0,37,176	0/0:19,0:19:32.79:0,33,315	0/0:20,0:20:38.87:0,39,438	0/0:14,0:14:26.82:0,27,220	1/1:5,8:13:39:449,39,0	1/1:6,9:15:38.97:459,39,0	1/1:11,15:26:71.91:807,72,0	0/0:14,0:14:40.18:0,40,426	0/0:19,0:19:54.27:0,54,480	0/0:13,0:13:29.82:0,30,237	0/0:18,0:18:38.97:0,39,349	0/0:15,0:15:38.89:0,39,379	1/1:5,11:15:44.92:537,45,0	0/0:16,0:16:44.30:0,44,640
chr10	32039968	.	GT	G	3207.06	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=5.500;DP=535;FS=1.809;HRun=7;HaplotypeScore=62.7117;InbreedingCoeff=0.9892;MQ=75.25;MQ0=0;MQRankSum=1.325;QD=24.86;ReadPosRankSum=-0.524;VQSLOD=3.9579;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:69.21:0,69,848	0/0:7,0:7:15.52:0,16,190	0/0:30,0:30:60.18:0,60,734	0/0:18,0:17:33.08:0,33,393	0/0:18,0:18:51.13:0,51,622	0/0:24,0:24:60.12:0,60,735	0/0:14,0:14:36.10:0,36,439	1/1:2,29:31:87.15:871,87,0	0/0:17,0:17:42.11:0,42,504	0/0:20,0:20:60.19:0,60,754	0/0:20,0:20:57.18:0,57,714	0/0:19,0:19:54.11:0,54,659	0/0:15,0:15:45.05:0,45,527	0/0:19,0:19:57.06:0,57,676	0/0:30,0:30:65.60:0,66,490	0/0:17,0:17:42.12:0,42,528	0/0:21,0:21:51.12:0,51,623	0/0:15,0:15:36.06:0,36,434	1/1:7,10:17:38.86:373,39,0	1/1:2,23:25:63.14:640,63,0	1/1:2,24:26:69.16:704,69,0	0/0:11,0:11:33.11:0,33,413	0/0:18,0:18:45.61:0,46,555	0/0:11,0:11:33.11:0,33,415	0/0:20,0:20:51.16:0,51,640	0/0:12,0:12:33.11:0,33,415	1/1:4,26:30:78.17:795,78,0	0/0:4,0:4:12.04:0,12,151
chr10	32040335	.	AAG	A	829.12	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.006;DP=530;FS=0.818;HRun=0;HaplotypeScore=69.7670;InbreedingCoeff=0.9670;MQ=67.65;MQ0=1;MQRankSum=0.577;QD=33.16;ReadPosRankSum=0.417;VQSLOD=5.2620;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:63.20:0,63,1143	0/0:4,0:4:12.04:0,12,225	0/0:34,0:33:93.19:0,93,1585	0/0:20,0:20:50.12:0,50,919	0/0:21,0:21:54.18:0,54,981	0/0:24,0:24:72.23:0,72,1297	0/0:22,0:22:63.20:0,63,1123	0/0:19,0:19:57.20:0,57,1052	0/0:18,0:18:54.17:0,54,979	0/0:33,0:33:93.31:0,93,1666	0/0:22,0:22:66.23:0,66,1230	0/0:17,0:17:51.17:0,51,936	0/0:18,0:18:54.18:0,54,985	0/0:17,0:17:51.15:0,51,879	1/1:1,24:24:63.21:924,63,0	0/0:20,0:20:60.21:0,60,1123	0/0:24,0:24:69.24:0,69,1290	0/0:10,0:10:30.08:0,30,527	0/0:18,0:18:51.13:0,51,904	0/0:20,0:20:60.19:0,60,1084	0/0:11,0:11:30.10:0,30,561	0/0:13,0:13:36.12:0,36,663	0/0:22,0:22:63.20:0,63,1147	0/0:12,0:12:33.10:0,33,585	0/0:13,0:12:36.12:0,36,674	0/0:23,0:23:69.23:0,69,1262	0/0:19,0:19:57.17:0,57,1003	0/0:9,0:9:24.08:0,24,433
chr10	32040388	.	G	GT	3111.15	PASS	AB=0.818;AC=35;AF=0.625;AN=56;BaseQRankSum=-3.610;DP=548;FS=1.083;HRun=15;HaplotypeScore=112.8430;InbreedingCoeff=0.3779;MQ=58.71;MQ0=4;MQRankSum=-1.834;QD=7.04;ReadPosRankSum=-3.754;VQSLOD=1.7098;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:24,13:41:4.17:433,0,4	0/1:3,0:3:0:0,0,0	0/0:25,0:15:2.67:0,3,13	0/0:10,0:9:3.90:0,4,12	0/0:5,0:13:11.65:0,12,34	0/0:11,0:25:36.17:0,36,114	0/0:9,0:20:22.25:0,22,64	1/1:24,0:23:9.92:52,10,0	0/0:6,0:11:10.86:0,11,31	1/1:21,6:26:29.92:242,30,0	1/1:18,7:25:41.59:312,42,0	1/1:10,2:12:14.86:111,15,0	1/1:17,4:22:17.56:225,18,0	1/1:9,3:13:20.75:143,21,0	0/1:15,1:20:2.76:3,0,72	1/1:13,7:22:23.74:283,24,0	0/1:15,9:26:21.50:237,0,21	1/1:6,1:8:8.82:62,9,0	1/1:22,0:22:9.51:54,10,0	1/1:31,0:31:32.05:146,32,0	0/1:9,0:9:0:0,0,0	1/1:15,4:19:25.15:191,25,0	0/1:18,3:21:22.52:117,0,23	0/1:9,4:13:5.17:58,0,5	0/1:16,11:27:23.64:244,0,24	1/1:16,3:19:17.92:140,18,0	1/1:17,0:16:6.32:22,6,0	0/1:10,9:19:11:213,0,11
chr10	32040413	.	A	AG	16077.67	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-4.533;DP=496;FS=19.270;HRun=1;HaplotypeScore=64.5278;InbreedingCoeff=0.9813;MQ=58.52;MQ0=5;MQRankSum=-3.153;QD=37.22;ReadPosRankSum=2.365;VQSLOD=3.1013;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,27:29:75.18:1071,75,0	1/1:1,5:6:15.05:225,15,0	0/0:27,0:14:32.57:0,33,428	0/0:24,0:17:48.16:0,48,623	1/1:2,18:20:51.17:762,51,0	1/1:2,16:18:48.16:718,48,0	1/1:2,19:21:51.17:759,51,0	1/1:4,11:14:39.13:573,39,0	1/1:0,15:15:42.14:629,42,0	1/1:2,25:25:75.24:1094,75,0	1/1:0,21:21:57.19:853,57,0	1/1:0,9:9:18.06:269,18,0	1/1:4,11:15:33.11:491,33,0	1/1:2,12:14:36.12:539,36,0	0/0:13,0:13:39.13:0,39,505	1/1:0,11:11:33.11:494,33,0	1/1:1,23:24:55.07:810,55,0	1/1:1,11:11:24.03:359,24,0	1/1:1,15:16:45.15:673,45,0	1/1:0,24:24:51.17:764,51,0	1/1:0,9:9:18.06:269,18,0	1/1:1,18:19:48.16:719,48,0	1/1:0,20:20:48.16:718,48,0	1/1:1,9:10:15.05:224,15,0	1/1:1,26:27:78.26:1168,78,0	1/1:0,9:9:24.01:331,24,0	1/1:0,20:19:57.19:847,57,0	1/1:3,17:20:48.16:719,48,0
chr10	32041135	.	AT	A	10918.11	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-3.972;DP=504;FS=0.000;HRun=9;HaplotypeScore=73.9018;InbreedingCoeff=0.9364;MQ=65.93;MQ0=0;MQRankSum=-5.739;QD=22.70;ReadPosRankSum=5.057;VQSLOD=5.2763;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,31:34:72.03:659,72,0	1/1:1,8:9:26.69:231,27,0	0/0:12,0:12:25.65:0,26,311	0/0:10,1:10:5.72:0,6,212	1/1:6,22:28:60:549,60,0	1/1:2,23:25:66.02:604,66,0	1/1:3,10:13:33.02:302,33,0	1/1:1,16:17:48:433,48,0	1/1:2,11:13:39.02:356,39,0	1/1:6,20:26:63.03:576,63,0	1/1:2,14:16:45.02:412,45,0	1/1:3,17:20:41.59:430,42,0	1/1:1,21:22:54.03:494,54,0	1/1:2,12:14:36.01:329,36,0	1/1:2,24:26:69.04:631,69,0	1/1:4,9:13:33:297,33,0	1/1:4,12:16:38.95:346,39,0	1/1:1,10:11:30.02:274,30,0	1/1:4,6:10:23.95:206,24,0	1/1:5,22:27:59.96:539,60,0	1/1:1,9:10:27.01:247,27,0	1/1:2,17:19:51.01:462,51,0	1/1:2,21:23:53.92:490,54,0	1/1:1,15:16:39.02:357,39,0	1/1:1,17:18:47.98:431,48,0	1/1:5,17:22:51.02:467,51,0	1/1:2,19:21:54.02:494,54,0	1/1:1,11:12:33.02:302,33,0
chr10	32041187	.	CT	C	4854.51	PASS	AB=0.709;AC=48;AF=0.857;AN=56;BaseQRankSum=1.763;DP=520;FS=4.912;HRun=13;HaplotypeScore=103.4485;InbreedingCoeff=0.0719;MQ=62.63;MQ0=2;MQRankSum=-3.659;QD=9.99;ReadPosRankSum=1.565;VQSLOD=4.3733;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:16,19:38:37.35:415,37,0	1/1:1,0:8:8.62:25,9,0	0/1:11,3:12:38.51:51,0,39	0/1:9,2:11:20.75:21,0,55	1/1:4,0:29:34.13:101,34,0	1/1:0,0:18:32.59:96,33,0	1/1:4,0:13:17.53:50,18,0	1/1:7,16:23:1.37:262,1,0	1/1:2,0:14:20.36:60,20,0	1/1:14,9:25:10.97:201,11,0	1/1:9,15:24:9.54:233,10,0	1/1:10,8:20:3.03:173,3,0	1/1:4,5:9:20.87:153,21,0	1/1:3,13:17:41.02:290,41,0	0/0:33,1:33:24.36:0,24,576	1/1:4,12:17:40.80:290,41,0	0/1:6,13:20:11.77:230,0,12	0/1:6,5:11:47.73:100,0,48	1/1:7,10:18:7.51:205,8,0	1/1:9,17:27:55.58:394,56,0	1/1:3,7:10:20.86:153,21,0	0/1:8,8:18:26.48:142,0,26	1/1:6,13:21:43.94:289,44,0	1/1:4,10:14:26.73:192,27,0	1/1:6,10:18:30.83:206,31,0	0/1:12,11:24:2.37:269,0,2	1/1:3,11:16:13.80:210,14,0	1/1:6,2:8:5.92:44,6,0
chr10	32042085	.	A	AT	2317.70	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-8.324;DP=610;FS=0.447;HRun=9;HaplotypeScore=57.4869;InbreedingCoeff=0.9621;MQ=60.01;MQ0=3;MQRankSum=4.350;QD=27.27;ReadPosRankSum=1.140;VQSLOD=3.9006;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:47.99:0,48,417	1/1:0,9:9:27.07:299,27,0	0/0:11,0:7:11.98:0,12,104	0/0:11,0:8:5.98:0,6,52	1/1:3,35:38:99:1161,105,0	1/1:1,12:13:30.08:332,30,0	1/1:3,11:14:13.06:367,13,0	0/0:28,0:27:59.97:0,60,521	1/1:0,11:11:30.08:332,30,0	0/0:31,0:31:83.97:0,84,729	0/0:26,0:26:65.84:0,66,562	0/0:17,0:17:50.97:0,51,439	0/0:18,0:18:50.98:0,51,443	0/0:23,0:23:56.95:0,57,491	0/0:25,0:25:71.97:0,72,621	0/0:21,0:21:56.99:0,57,495	0/0:25,0:26:47.58:0,48,481	0/0:15,0:15:38.93:0,39,326	0/0:13,0:12:26.98:0,27,234	0/0:38,0:40:99:0,118,990	0/0:12,0:12:32.96:0,33,280	0/0:27,0:27:80.98:0,81,703	0/0:33,0:33:86.98:0,87,755	0/0:11,0:11:26.99:0,27,234	0/0:26,0:26:77.98:0,78,677	0/0:27,0:27:59.96:0,60,521	0/0:33,0:34:85.96:0,86,728	0/0:32,0:32:69.48:0,69,758
chr10	32042858	.	ATGTG	A	2593.92	PASS	AB=0.874;AC=22;AF=0.423;AN=52;BaseQRankSum=5.249;DP=685;FS=1.768;HRun=0;HaplotypeScore=137.2639;InbreedingCoeff=0.6346;MQ=57.60;MQ0=8;MQRankSum=-0.767;QD=7.23;ReadPosRankSum=0.003;VQSLOD=2.1500;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:39.59:0,40,823	./.	./.	0/0:33,0:19:2.03:0,2,5	1/1:15,17:32:24.04:353,24,0	0/1:16,14:31:0.90:244,0,1	1/1:12,15:27:10.98:275,11,0	1/1:33,8:41:8.54:185,9,0	1/1:7,17:24:17.62:285,18,0	1/1:7,14:21:10.58:316,11,0	1/1:9,11:22:9.03:143,9,0	0/0:24,0:24:27.08:0,27,528	0/1:19,0:19:0.01:0,0,462	0/0:20,0:20:36.12:0,36,766	0/1:28,0:28:45.07:45,0,89	0/0:28,0:29:57.51:0,58,1151	0/0:29,1:31:0.87:0,1,887	0/0:17,0:17:18.02:0,18,379	0/1:18,5:23:7.23:161,0,7	1/1:9,9:18:15.05:233,15,0	1/1:29,23:51:17.85:255,18,0	0/0:12,0:13:6.02:0,6,142	0/0:16,0:16:8.76:0,9,114	0/0:22,0:22:33.01:0,33,510	0/0:21,0:21:9.73:0,10,389	0/0:18,0:18:33.95:0,34,658	1/1:9,9:19:16.03:283,16,0	0/0:3,0:8:8.48:0,8,49
chr10	32052894	.	CTCCCT	C	6769.68	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=12.872;DP=692;FS=6.116;HRun=0;HaplotypeScore=134.6948;InbreedingCoeff=0.9999;MQ=91.16;MQ0=0;MQRankSum=-4.758;QD=51.68;ReadPosRankSum=1.076;VQSLOD=5.2572;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,117,3537	0/0:14,0:14:42.14:0,42,1321	0/0:30,0:30:81.27:0,81,2125	0/0:29,0:29:72:0,72,2001	0/0:27,0:27:81.28:0,81,2519	0/0:26,0:25:78.27:0,78,2408	0/0:30,0:30:87.30:0,87,2700	1/1:4,21:25:63.20:1287,63,0	0/0:29,0:29:87.30:0,87,2657	0/0:26,0:26:78.27:0,78,2365	0/0:18,0:18:54.19:0,54,1631	0/0:29,0:29:84.29:0,84,2614	0/0:23,0:23:63.22:0,63,1993	0/0:23,0:23:69.24:0,69,2142	0/0:32,0:32:96.33:0,96,3006	0/0:24,0:23:72.24:0,72,2196	0/0:14,0:14:42.14:0,42,1325	0/0:17,0:17:48.16:0,48,1379	1/1:2,15:17:45.13:935,45,0	1/1:2,29:31:78.27:1666,78,0	1/1:4,26:30:72.20:1516,72,0	0/0:25,0:25:72.25:0,72,2214	0/0:22,0:22:66.21:0,66,2002	0/0:17,0:17:45.15:0,45,1383	0/0:29,0:29:84.29:0,84,2585	0/0:25,0:25:75.26:0,75,2298	1/1:2,26:28:63.22:1366,63,0	0/0:11,0:11:33.11:0,33,1026
chr10	32055580	.	GCCTCTC	G	716.92	PASS	AB=0.952;AC=5;AF=0.089;AN=56;BaseQRankSum=7.003;DP=542;FS=0.000;HRun=0;HaplotypeScore=128.4528;InbreedingCoeff=-0.0975;MQ=56.34;MQ0=5;MQRankSum=-4.788;QD=8.24;ReadPosRankSum=-0.359;VQSLOD=2.2968;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:63.13:0,63,1220	0/1:6,0:6:25.65:32,0,26	0/0:11,0:2:2.90:0,3,16	0/0:12,0:6:9.15:0,9,57	0/1:11,5:15:12.48:12,0,18	0/1:24,0:24:85.64:330,0,86	0/1:19,0:18:78.46:208,0,78	0/0:23,0:22:42.07:0,42,570	0/1:22,0:22:99:250,0,161	0/0:13,0:12:29.88:0,30,529	0/0:16,0:16:29.92:0,30,572	0/0:24,0:24:48.11:0,48,920	0/0:20,0:20:42.04:0,42,756	0/0:23,0:23:57.12:0,57,992	0/0:36,0:36:65.83:0,66,931	0/0:18,0:18:30.01:0,30,640	0/0:30,0:30:69.62:0,70,1422	0/0:11,0:11:21.07:0,21,532	0/0:15,0:13:32.91:0,33,627	0/0:12,0:12:24.07:0,24,425	0/0:55,0:55:99:0,129,2544	0/0:16,0:16:33.10:0,33,767	0/0:15,0:15:35.97:0,36,589	0/0:22,0:22:39.92:0,40,713	0/0:10,0:10:21.06:0,21,431	0/0:22,0:22:51.16:0,51,1082	0/0:17,0:17:36.07:0,36,888	0/0:4,0:4:8.98:0,9,73
chr10	32055923	.	C	CCCTT	1457.58	PASS	AB=0.967;AC=15;AF=0.300;AN=50;BaseQRankSum=-4.114;DP=650;FS=1.717;HRun=0;HaplotypeScore=123.0358;InbreedingCoeff=0.5374;MQ=64.77;MQ0=4;MQRankSum=1.606;QD=6.60;ReadPosRankSum=-1.671;VQSLOD=2.4828;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:25,9:36:18.06:416,18,0	0/0:9,0:9:0:0,0,0	./.	./.	0/0:20,0:20:7.47:0,7,43	0/1:18,0:18:1.83:2,0,47	0/1:31,0:31:0.67:22,0,1	./.	0/0:30,0:30:3:0,3,28	0/0:19,0:19:0.05:0,0,146	0/0:14,0:14:9.03:0,9,126	1/1:20,1:21:9.03:195,9,0	1/1:15,5:21:6.02:138,6,0	0/0:28,0:28:30.10:0,30,443	0/0:31,0:31:18.01:0,18,163	1/1:14,8:22:9.03:208,9,0	0/0:35,0:35:42.10:0,42,588	0/0:14,0:21:9.01:0,9,84	0/0:11,0:11:6.02:0,6,91	0/0:14,0:14:5.93:0,6,91	0/0:28,0:28:36.05:0,36,476	1/1:18,2:21:9.97:174,10,0	1/1:12,2:14:3.01:69,3,0	0/1:33,4:37:99:390,0,201	0/0:25,0:25:15.05:0,15,225	0/0:23,0:23:27.05:0,27,330	0/0:33,0:33:27.05:0,27,336	0/0:19,0:17:6:0,6,68
chr10	32055969	.	CTTCCTTCCTTCA	C	1825.78	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=8.626;DP=566;FS=11.559;HRun=0;HaplotypeScore=168.2130;InbreedingCoeff=0.7695;MQ=59.96;MQ0=8;MQRankSum=-1.053;QD=13.04;ReadPosRankSum=0.416;VQSLOD=2.1650;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:56.79:0,57,1372	1/1:2,8:10:1.38:184,1,0	0/0:6,0:6:18.05:0,18,211	0/1:5,0:4:13.73:14,0,54	1/1:3,19:22:47.53:529,48,0	1/1:2,16:18:15.05:490,15,0	1/1:23,0:23:2.92:20,3,0	0/0:17,0:14:35.98:0,36,313	1/1:5,24:29:2.63:108,3,0	0/0:19,0:19:54.07:0,54,1128	0/0:12,0:12:33.03:0,33,748	0/0:17,0:17:35.83:0,36,828	0/0:30,0:29:62.89:0,63,883	0/0:23,0:23:63.05:0,63,1659	1/1:7,26:32:18.06:647,18,0	0/0:25,0:25:35.11:0,35,1470	0/0:39,0:39:93.10:0,93,3041	0/0:16,0:16:29.96:0,30,538	0/0:15,0:11:32.84:0,33,572	0/0:12,0:12:35.80:0,36,694	0/0:28,0:28:78.10:0,78,1987	0/0:16,0:16:42.03:0,42,744	0/0:14,0:14:38.98:0,39,554	0/0:33,0:33:75.16:0,75,2672	0/0:18,0:18:42.08:0,42,1325	0/0:24,0:24:69.11:0,69,1886	0/0:22,0:21:54:0,54,1313	0/0:12,0:11:17.94:0,18,346
chr10	32055973	.	CTTCCTTCA	C	1073.12	PASS	AB=0.857;AC=13;AF=0.232;AN=56;BaseQRankSum=8.167;DP=556;FS=10.909;HRun=0;HaplotypeScore=129.6032;InbreedingCoeff=0.8164;MQ=61.60;MQ0=6;MQRankSum=-1.652;QD=7.83;ReadPosRankSum=0.373;VQSLOD=2.0457;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:55.56:0,56,1016	1/1:9,0:9:12.45:136,12,0	0/0:7,0:7:21.06:0,21,254	0/1:5,0:5:17.56:18,0,51	1/1:21,0:21:27.40:310,27,0	1/1:18,0:18:15.05:263,15,0	1/1:7,16:23:3.48:82,3,0	0/0:16,0:13:38.96:0,39,335	1/1:29,0:29:2.91:63,3,0	0/0:22,0:22:48.06:0,48,887	0/0:11,0:11:33.02:0,33,547	0/0:18,0:18:41.82:0,42,650	0/0:29,0:28:66.84:0,67,742	0/0:22,0:22:60.06:0,60,1365	1/1:31,0:30:18.06:375,18,0	0/0:25,0:25:35.55:0,36,1047	0/0:38,0:38:95.98:0,96,2317	0/0:16,0:16:32.95:0,33,339	0/0:15,0:12:35.85:0,36,498	0/0:13,0:13:38.80:0,39,592	0/0:26,0:26:77.96:0,78,1591	0/0:15,0:15:41.93:0,42,475	0/0:15,0:15:41.97:0,42,487	0/0:30,0:30:70.95:0,71,1840	0/0:17,0:17:42.05:0,42,967	0/0:24,0:24:69.09:0,69,1479	0/0:24,0:23:59.98:0,60,1114	0/0:8,0:8:17.92:0,18,242
chr10	32056822	.	G	GT	183.13	PASS	AC=24;AF=1.000;AN=24;DP=45;FS=0.000;HRun=1;HaplotypeScore=59.3585;InbreedingCoeff=-0.0520;MQ=63.20;MQ0=0;QD=5.55;VQSLOD=0.2974;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,0:3:5.72:29,6,0	./.	1/1:2,0:2:4.07:12,4,0	./.	./.	./.	./.	1/1:7,0:7:11.10:57,11,0	1/1:3,1:4:5.80:33,6,0	./.	./.	./.	1/1:1,0:1:2.96:19,3,0	./.	./.	./.	./.	1/1:4,0:4:2.74:12,3,0	1/1:3,0:3:2.60:10,3,0	./.	1/1:0,1:1:2.90:16,3,0	1/1:1,1:2:2.84:14,3,0	1/1:1,1:2:2.94:18,3,0	./.	1/1:2,0:2:2.94:18,3,0	./.	./.	1/1:2,0:2:2.94:18,3,0
chr10	32060117	.	AG	A	1612.14	PASS	AB=0.775;AC=12;AF=0.222;AN=54;BaseQRankSum=1.768;DP=269;FS=0.000;HRun=1;HaplotypeScore=247.3220;InbreedingCoeff=0.6894;MQ=47.79;MQ0=0;MQRankSum=2.253;QD=28.28;ReadPosRankSum=-0.663;VQSLOD=2.7724;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:8:16.48:0,16,74	1/1:0,3:3:9.03:116,9,0	0/1:2,1:3:16.27:16,0,19	0/1:3,1:4:15.62:16,0,69	1/1:0,14:14:41.99:463,42,0	1/1:1,13:14:41.94:469,42,0	1/1:0,3:3:9.03:115,9,0	0/0:17,0:17:47.41:0,47,342	1/1:1,15:16:48.12:588,48,0	0/0:14,0:14:38.42:0,38,275	0/0:10,0:10:24.38:0,24,154	0/0:10,0:10:22.38:0,22,107	0/0:12,0:12:29.31:0,29,125	0/0:8,0:7:18.58:0,19,77	0/0:15,0:15:41.44:0,41,192	0/0:8,0:8:19.76:0,20,114	./.	0/0:4,0:4:11.56:0,12,65	0/0:16,0:16:44.47:0,44,343	0/0:15,0:15:41.09:0,41,189	0/0:2,0:2:2.68:0,3,11	0/0:13,0:13:29.50:0,30,156	0/0:10,0:10:26.89:0,27,131	0/0:3,0:3:2.92:0,3,17	0/0:10,0:10:27.30:0,27,118	0/0:14,0:14:40.34:0,40,239	0/0:17,0:16:47.90:0,48,265	0/0:4,0:4:11.42:0,11,58
chr10	32060134	.	AG	A	10232.51	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=1.659;DP=274;FS=14.233;HRun=1;HaplotypeScore=236.8107;InbreedingCoeff=0.7104;MQ=41.98;MQ0=0;MQRankSum=-3.826;QD=38.04;ReadPosRankSum=1.914;VQSLOD=0.9707;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,13:12:23.99:290,24,0	1/1:0,5:5:15.05:209,15,0	0/0:3,0:3:8.81:0,9,62	0/0:2,0:2:5.70:0,6,29	1/1:0,17:17:48.02:597,48,0	1/1:1,15:16:48.12:647,48,0	1/1:0,5:5:15.05:209,15,0	1/1:0,17:17:51.17:711,51,0	1/1:0,16:16:48.12:647,48,0	1/1:0,14:14:42.14:581,42,0	1/1:0,11:11:30.10:417,30,0	1/1:0,7:7:21.07:292,21,0	1/1:0,11:11:33.11:460,33,0	1/1:0,7:7:21.03:271,21,0	1/1:0,14:14:41.98:498,42,0	1/1:0,9:9:26.97:311,27,0	1/1:0,2:1:2.97:20,3,0	1/1:0,6:6:18.06:249,18,0	1/1:0,13:13:36.12:501,36,0	1/1:0,14:14:42.14:585,42,0	1/1:0,4:4:12:145,12,0	1/1:1,12:13:39:477,39,0	1/1:0,10:10:30.10:418,30,0	1/1:0,3:3:3.01:42,3,0	1/1:1,8:9:27:330,27,0	1/1:0,14:14:42.10:561,42,0	1/1:1,14:14:45.11:599,45,0	1/1:0,4:4:12.04:167,12,0
chr10	32060150	.	AG	A	7429.74	PASS	AB=0.767;AC=54;AF=0.964;AN=56;BaseQRankSum=1.827;DP=292;FS=11.997;HRun=1;HaplotypeScore=264.9709;InbreedingCoeff=-0.0370;MQ=54.89;MQ0=0;MQRankSum=-3.050;QD=25.44;ReadPosRankSum=2.383;VQSLOD=2.1636;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,14:13:27.19:292,27,0	1/1:0,4:4:12:117,12,0	0/1:4,3:7:79.16:82,0,79	0/1:4,1:4:18.74:19,0,87	1/1:0,17:17:47.89:403,48,0	1/1:0,17:17:50.96:457,51,0	1/1:0,8:8:23.97:228,24,0	1/1:0,22:22:66.02:666,66,0	1/1:0,12:12:35.96:317,36,0	1/1:0,13:13:38.92:384,39,0	1/1:0,13:13:32.92:271,33,0	1/1:0,6:6:17.95:145,18,0	1/1:0,14:14:41.93:402,42,0	1/1:0,7:7:20.94:180,21,0	1/1:0,11:11:32.95:300,33,0	1/1:0,12:12:35.93:295,36,0	1/1:0,4:3:8.96:68,9,0	1/1:0,7:7:21:187,21,0	1/1:0,12:12:36.03:340,36,0	1/1:0,17:17:50.93:462,51,0	1/1:0,5:5:12:130,12,0	1/1:0,13:13:38.90:339,39,0	1/1:0,9:9:26.92:231,27,0	1/1:0,5:5:5.98:48,6,0	1/1:0,8:8:24:233,24,0	1/1:0,12:12:36.03:359,36,0	1/1:0,14:14:41.94:366,42,0	1/1:0,4:4:11.81:110,12,0
chr10	32060155	.	AG	A	3393.13	PASS	AB=0.762;AC=54;AF=0.964;AN=56;BaseQRankSum=3.057;DP=251;FS=23.766;HRun=1;HaplotypeScore=250.8493;InbreedingCoeff=-0.0231;MQ=62.31;MQ0=0;MQRankSum=-3.205;QD=13.52;ReadPosRankSum=3.605;VQSLOD=0.6885;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,10:10:19.93:111,20,0	1/1:0,3:3:8.52:42,9,0	0/1:4,4:8:70.61:127,0,71	0/1:5,1:5:13.60:14,0,54	1/1:0,15:16:40.11:169,40,0	1/1:0,15:15:42.56:209,43,0	1/1:0,6:6:16.72:78,17,0	1/1:0,16:16:47:291,47,0	1/1:0,11:11:31.25:155,31,0	1/1:0,11:11:31.98:211,32,0	1/1:0,13:13:29.43:128,29,0	1/1:0,6:6:16.92:82,17,0	1/1:0,10:10:27.63:125,28,0	1/1:0,6:6:16.27:71,16,0	1/1:0,9:9:25.01:115,25,0	1/1:0,12:12:33.99:166,34,0	1/1:0,3:3:8.10:34,8,0	1/1:0,7:7:20.56:128,21,0	1/1:0,11:11:32.59:216,33,0	1/1:0,14:14:39.13:184,39,0	1/1:0,3:3:6.01:25,6,0	1/1:0,11:11:29.78:129,30,0	1/1:0,8:8:21.36:89,21,0	1/1:0,5:5:5.36:23,5,0	1/1:0,6:6:17:83,17,0	1/1:0,9:9:26.45:158,26,0	1/1:0,13:13:36.95:191,37,0	1/1:0,3:3:7.11:39,7,0
chr10	32060159	.	AG	A	3158.09	PASS	AB=0.736;AC=54;AF=0.964;AN=56;BaseQRankSum=2.267;DP=259;FS=7.645;HRun=1;HaplotypeScore=254.6364;InbreedingCoeff=-0.0486;MQ=61.65;MQ0=0;MQRankSum=-2.611;QD=12.19;ReadPosRankSum=2.560;VQSLOD=2.4610;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,10:10:19.73:101,20,0	1/1:0,3:3:8.23:36,8,0	0/1:3,5:8:74.40:140,0,74	0/1:5,1:5:26.83:52,0,27	1/1:1,15:16:40:166,40,0	1/1:0,15:15:41.28:183,41,0	1/1:1,6:7:16.59:75,17,0	1/1:0,16:16:46.20:257,46,0	1/1:0,11:11:30.35:135,30,0	1/1:1,11:12:34.70:224,35,0	1/1:1,12:13:27:114,27,0	1/1:1,6:7:16.63:77,17,0	1/1:0,10:10:27.10:116,27,0	1/1:0,6:6:16.19:68,16,0	1/1:0,9:9:24.37:104,24,0	1/1:0,12:12:33.23:150,33,0	1/1:0,3:3:8.04:33,8,0	1/1:0,7:7:20.22:111,20,0	1/1:0,11:11:32.29:193,32,0	1/1:0,14:14:38.49:169,38,0	1/1:0,3:3:8.02:33,8,0	1/1:0,11:11:29.63:123,30,0	1/1:0,8:8:18.75:78,19,0	1/1:0,5:5:5.36:22,5,0	1/1:0,6:6:16.47:73,16,0	1/1:1,9:10:28.86:156,29,0	1/1:1,13:14:38.98:184,39,0	1/1:3,3:6:14.40:87,14,0
chr10	32060162	.	AG	A	5933.88	PASS	AB=0.738;AC=54;AF=0.964;AN=56;BaseQRankSum=1.955;DP=270;FS=16.225;HRun=1;HaplotypeScore=245.8732;InbreedingCoeff=-0.0475;MQ=60.84;MQ0=0;MQRankSum=-3.401;QD=21.98;ReadPosRankSum=2.365;VQSLOD=1.7878;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,11:11:23.78:212,24,0	1/1:0,3:3:8.98:72,9,0	0/1:4,5:9:70.37:136,0,70	0/1:4,1:4:10.16:40,0,10	1/1:0,16:16:44.80:341,45,0	1/1:0,15:15:44.90:360,45,0	1/1:1,7:8:17.88:134,18,0	1/1:1,16:17:50.90:429,51,0	1/1:0,11:11:32.93:265,33,0	1/1:0,12:12:35.95:317,36,0	1/1:1,12:13:29.84:223,30,0	1/1:0,7:7:20.89:159,21,0	1/1:0,10:10:29.92:238,30,0	1/1:2,6:7:20.95:168,21,0	1/1:0,9:9:26.94:214,27,0	1/1:1,13:14:38.91:313,39,0	1/1:0,4:3:8.97:70,9,0	1/1:1,7:8:20.99:179,21,0	1/1:0,11:11:33:289,33,0	1/1:0,14:14:41.87:328,42,0	1/1:0,3:3:8.94:67,9,0	1/1:0,11:11:32.88:254,33,0	1/1:0,8:8:20.93:163,21,0	1/1:0,5:5:5.98:46,6,0	1/1:0,6:6:17.96:143,18,0	1/1:0,10:10:29.98:258,30,0	1/1:1,14:15:41.94:352,42,0	1/1:0,6:6:18:165,18,0
chr10	32060167	.	AG	A	10809.53	PASS	AB=0.717;AC=54;AF=0.964;AN=56;BaseQRankSum=0.865;DP=337;FS=18.016;HRun=1;HaplotypeScore=238.4417;InbreedingCoeff=-0.0444;MQ=57.22;MQ0=0;MQRankSum=-2.432;QD=32.08;ReadPosRankSum=1.371;VQSLOD=1.0978;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,14:13:22.88:344,23,0	1/1:0,3:3:9.03:125,9,0	0/1:3,6:9:23.78:202,0,24	0/1:3,1:4:5.38:41,0,5	1/1:0,22:22:47.95:616,48,0	1/1:0,19:19:45.15:613,45,0	1/1:0,11:11:17.95:218,18,0	1/1:0,25:25:75.24:1020,75,0	1/1:0,13:13:33.11:446,33,0	1/1:1,12:13:39.12:522,39,0	1/1:0,15:15:30.01:392,30,0	1/1:0,12:12:24.08:327,24,0	1/1:0,11:11:30.10:418,30,0	1/1:0,10:9:24.08:327,24,0	1/1:0,12:12:27.09:376,27,0	1/1:0,19:19:39.13:536,39,0	1/1:1,4:3:9.03:125,9,0	1/1:0,9:9:24.08:335,24,0	1/1:0,13:13:39.13:544,39,0	1/1:0,17:17:41.84:509,42,0	1/1:1,3:4:9.03:125,9,0	1/1:1,11:12:36.02:459,36,0	1/1:0,11:11:21.07:292,21,0	1/1:0,5:5:6.02:83,6,0	1/1:0,8:8:18.06:251,18,0	1/1:0,17:17:51.17:710,51,0	1/1:0,17:17:45.08:603,45,0	1/1:0,6:6:18.06:250,18,0
chr10	32061053	.	CTTT	C	6981.12	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=3.962;DP=494;FS=2.802;HRun=15;HaplotypeScore=106.4478;InbreedingCoeff=0.8692;MQ=63.58;MQ0=11;MQRankSum=-2.502;QD=20.90;ReadPosRankSum=6.675;VQSLOD=4.0122;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,10:26:46.17:489,46,0	1/1:1,1:7:17.71:122,18,0	0/0:26,0:10:12.03:0,12,144	0/0:29,0:15:10.91:0,11,198	1/1:4,0:13:27.68:163,28,0	1/1:3,0:12:26.43:159,26,0	1/1:8,0:15:1.21:131,1,0	0/0:30,0:31:60.03:0,60,832	1/1:3,0:11:29.39:177,29,0	1/1:7,13:26:53.61:546,54,0	1/1:1,7:9:21.03:235,21,0	1/1:7,12:19:38.20:411,38,0	1/1:5,11:17:38.96:419,39,0	1/1:3,13:16:44.72:466,45,0	0/0:14,0:13:18.06:0,18,299	1/1:5,14:19:57.12:620,57,0	1/1:13,12:24:26.54:470,27,0	1/1:8,13:22:20.11:412,20,0	0/0:18,0:18:42.10:0,42,646	0/0:17,0:17:42.14:0,42,719	0/0:2,0:2:6.02:0,6,108	1/1:4,12:16:42.11:470,42,0	1/1:6,16:23:59.94:628,60,0	1/1:3,3:6:6.01:67,6,0	1/1:3,14:22:30.23:531,30,0	1/1:6,14:18:1.69:380,2,0	0/0:16,0:18:36.04:0,36,525	1/1:1,2:3:8.96:85,9,0
chr10	32062371	.	A	AT	9174.37	PASS	AB=1.000;AC=31;AF=0.554;AN=56;BaseQRankSum=-18.211;DP=572;FS=10.529;HRun=7;HaplotypeScore=81.2054;InbreedingCoeff=0.9290;MQ=76.91;MQ0=0;MQRankSum=-3.412;QD=29.50;ReadPosRankSum=0.792;VQSLOD=4.7531;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,17:21:32.33:544,32,0	0/0:1,0:14:26.48:0,26,78	0/0:16,0:13:23.93:0,24,218	0/1:21,0:18:11.74:12,0,211	0/0:0,0:32:66.21:0,66,202	0/0:1,0:20:36.67:0,37,108	0/0:2,0:12:16.29:0,16,48	0/0:1,0:29:57.88:0,58,177	0/0:0,0:16:32.59:0,33,95	1/1:3,21:24:65.56:770,66,0	1/1:5,26:31:78.13:920,78,0	1/1:3,16:19:48.15:580,48,0	1/1:3,20:24:63.06:739,63,0	1/1:0,17:17:51.16:616,51,0	0/0:2,0:22:38.89:0,39,115	1/1:1,17:19:44.19:574,44,0	1/1:2,13:15:39.12:471,39,0	1/1:2,16:19:45.14:543,45,0	0/0:0,0:17:34.63:0,35,102	0/0:3,0:28:46.85:0,47,138	0/0:1,0:13:22.41:0,22,66	1/1:1,16:17:45.14:544,45,0	1/1:0,22:22:57.05:688,57,0	1/1:0,10:10:30.09:362,30,0	1/1:2,15:17:45.14:544,45,0	1/1:0,28:28:84.26:1015,84,0	0/0:4,0:42:75.37:0,75,222	1/1:0,7:7:21.06:254,21,0
chr10	32063192	.	C	CAG	14292.22	PASS	AB=0.579;AC=28;AF=0.500;AN=56;BaseQRankSum=-11.750;DP=831;FS=4.843;HRun=0;HaplotypeScore=114.1721;InbreedingCoeff=0.8435;MQ=71.43;MQ0=4;MQRankSum=-3.740;QD=33.39;ReadPosRankSum=4.722;VQSLOD=6.7467;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,29:33:69.24:1131,69,0	0/0:7,0:7:18.06:0,18,223	0/0:47,0:42:77.28:0,77,928	0/0:38,0:33:56.92:0,57,628	0/0:34,0:35:84.09:0,84,1012	0/0:23,0:24:56.98:0,57,653	0/0:26,0:26:69.22:0,69,854	0/0:33,0:33:63.20:0,63,780	0/0:30,0:30:23.02:0,23,806	1/1:13,26:38:84.26:1327,84,0	1/1:2,15:18:39.13:640,39,0	0/1:4,21:25:11.05:869,0,11	0/1:13,22:35:48.35:821,0,48	1/1:8,24:32:57.19:934,57,0	0/0:38,0:38:90.28:0,90,1114	1/1:4,26:30:66.23:1082,66,0	1/1:3,24:27:69.24:1131,69,0	1/1:2,19:21:4.95:602,5,0	0/0:23,0:23:45.14:0,45,558	0/0:27,0:29:71.73:0,72,842	0/0:32,0:32:78.25:0,78,966	1/1:3,22:26:50.99:836,51,0	1/1:3,19:22:42.14:689,42,0	1/1:6,22:29:29.04:996,29,0	1/1:13,31:44:78.27:1279,78,0	1/1:5,26:31:78.27:1266,78,0	0/0:41,0:39:99:0,102,1263	1/1:1,14:15:42.14:689,42,0
chr10	32064931	.	G	GA	3811.39	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-4.993;DP=678;FS=8.157;HRun=6;HaplotypeScore=64.5785;InbreedingCoeff=0.9996;MQ=68.65;MQ0=0;MQRankSum=-2.247;QD=34.65;ReadPosRankSum=2.706;VQSLOD=3.3933;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,120,1224	1/1:1,11:12:33.11:415,33,0	0/0:19,0:16:39.06:0,39,389	0/0:16,0:15:33.04:0,33,326	1/1:2,28:30:84.27:1057,84,0	1/1:3,23:26:69.22:868,69,0	1/1:1,17:18:48.15:604,48,0	0/0:29,0:29:81.14:0,81,815	1/1:1,23:24:69.22:868,69,0	0/0:29,0:29:84.19:0,84,855	0/0:18,0:18:48.11:0,48,490	0/0:36,0:36:99:0,105,1071	0/0:23,0:23:69.15:0,69,698	0/0:25,0:25:63.14:0,63,642	0/0:35,0:35:99:0,99,991	0/0:21,0:21:54.12:0,54,551	0/0:26,0:26:69.15:0,69,704	0/0:13,0:13:36.08:0,36,367	0/0:20,0:19:57.12:0,57,576	0/0:31,0:31:75.16:0,75,763	0/0:25,0:25:75.17:0,75,765	0/0:21,0:21:51.11:0,51,520	0/0:24,0:24:69.13:0,69,696	0/0:27,0:27:78.18:0,78,796	0/0:24,0:24:69.15:0,69,698	0/0:29,0:29:87.19:0,87,882	0/0:26,0:26:66.15:0,66,673	0/0:9,0:9:27.06:0,27,275
chr10	32065522	.	CTGTGTGTGTG	C	4587.39	PASS	AB=0.884;AC=26;AF=0.500;AN=52;BaseQRankSum=0.671;DP=667;FS=0.000;HRun=0;HaplotypeScore=195.8815;InbreedingCoeff=0.7168;MQ=67.96;MQ0=8;MQRankSum=-7.560;QD=15.60;ReadPosRankSum=2.857;VQSLOD=3.7588;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:30,13:42:44.01:185,0,44	0/0:8,0:9:12.04:0,12,328	./.	0/0:28,0:23:3.01:0,3,61	0/0:25,0:27:20.35:0,20,566	0/0:27,0:29:17.97:0,18,526	0/0:29,0:31:27:0,27,491	0/0:32,0:32:40.94:0,41,833	0/0:21,0:26:35.64:0,36,1004	1/1:13,2:14:12.03:284,12,0	1/1:7,2:11:12.03:176,12,0	1/1:16,22:38:38.77:915,39,0	1/1:10,13:23:12.03:467,12,0	1/1:11,15:26:29.84:704,30,0	0/0:17,0:33:22.78:0,23,315	1/1:8,11:20:20.99:490,21,0	1/1:10,7:16:3.01:90,3,0	0/1:13,0:12:99:161,0,140	0/0:16,0:19:21.54:0,22,721	0/0:18,0:18:21.07:0,21,826	0/0:31,0:48:36.07:0,36,1205	1/1:16,10:26:21.03:558,21,0	1/1:5,5:10:8.99:153,9,0	1/1:12,1:12:5.87:93,6,0	1/1:17,11:27:12.04:223,12,0	./.	0/0:20,0:25:29.99:0,30,657	1/1:6,5:11:3.01:90,3,0
chr10	32065567	.	AGT	A	1813.27	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=7.583;DP=650;FS=2.684;HRun=0;HaplotypeScore=146.3836;InbreedingCoeff=0.9959;MQ=50.82;MQ0=9;MQRankSum=-4.477;QD=19.50;ReadPosRankSum=-2.021;VQSLOD=3.6036;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:48:99:0,102,1664	1/1:2,7:9:22.81:289,23,0	0/0:39,0:17:48.16:0,48,788	0/0:34,0:17:45.13:0,45,691	1/1:6,16:22:35.87:433,36,0	1/1:8,9:17:27.06:340,27,0	1/1:7,15:22:19.48:434,19,0	0/0:21,0:20:45.13:0,45,702	1/1:9,14:23:39.12:492,39,0	0/0:19,0:19:48.16:0,48,796	0/0:13,0:13:30.10:0,30,493	0/0:32,0:32:57.06:0,57,867	0/0:30,0:30:45.15:0,45,746	0/0:33,0:33:69.24:0,69,1112	0/0:33,0:33:66.23:0,66,1085	0/0:30,0:30:66.22:0,66,1081	0/0:15,0:14:27.09:0,27,446	0/0:17,0:16:33.55:0,34,508	0/0:13,0:13:30.10:0,30,497	0/0:15,0:14:30.10:0,30,497	0/0:38,0:37:57.18:0,57,914	0/0:20,0:20:51:0,51,798	0/0:18,0:17:37.66:0,38,597	0/0:21,0:20:33.11:0,33,549	0/0:22,0:22:39.13:0,39,644	0/0:18,0:18:48.16:0,48,793	0/0:18,0:18:32.31:0,32,504	0/0:9,0:9:21.07:0,21,347
chr10	32065623	.	TA	T	557.50	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=13.467;DP=747;FS=1.026;HRun=2;HaplotypeScore=153.0028;InbreedingCoeff=0.9990;MQ=84.62;MQ0=0;MQRankSum=-10.077;QD=5.41;ReadPosRankSum=2.694;VQSLOD=0.7843;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:50:99:0,150,2200	1/1:6,8:14:27.76:157,28,0	0/0:31,0:31:90.17:0,90,1251	0/0:29,0:29:73.28:0,73,1084	1/1:5,23:28:29.98:157,30,0	1/1:6,14:19:30.29:137,30,0	1/1:2,17:17:23.81:90,24,0	0/0:28,0:28:84.28:0,84,1240	1/1:6,16:20:36.89:192,37,0	0/0:36,0:36:99:0,105,1555	0/0:21,0:21:60.20:0,60,899	0/0:31,0:31:87.21:0,87,1253	0/0:36,0:36:99:0,102,1496	0/0:35,0:35:99:0,102,1439	0/0:36,0:36:99:0,105,1573	0/0:42,0:42:99:0,120,1749	0/0:26,0:26:69.23:0,69,1034	0/0:16,0:16:42.14:0,42,621	0/0:24,0:24:72.18:0,72,1016	0/0:26,0:26:75.24:0,75,1104	0/0:21,0:21:63.21:0,63,938	0/0:27,0:27:75.25:0,75,1124	0/0:22,0:21:63.15:0,63,880	0/0:27,0:27:75.25:0,75,1120	0/0:23,0:23:63.17:0,63,919	0/0:26,0:26:78.25:0,78,1132	0/0:18,0:18:54.18:0,54,805	0/0:12,0:12:33.11:0,33,495
chr10	32065627	.	T	TC	1026.92	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=13.204;DP=737;FS=5.238;HRun=1;HaplotypeScore=148.3552;InbreedingCoeff=0.9997;MQ=85.01;MQ0=0;MQRankSum=-10.025;QD=10.48;ReadPosRankSum=2.639;VQSLOD=1.9693;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:52:99:0,154,2139	1/1:6,8:14:32.38:255,32,0	0/0:29,0:29:81.26:0,81,1119	0/0:26,0:26:72.51:0,73,919	1/1:4,23:27:41.91:246,42,0	1/1:3,14:16:37.46:230,37,0	1/1:2,17:17:31.52:161,32,0	0/0:27,0:27:81.26:0,81,1105	1/1:5,16:19:46.07:310,46,0	0/0:36,0:36:99:0,105,1468	0/0:22,0:22:60.20:0,60,839	0/0:34,0:34:96.31:0,96,1318	0/0:36,0:36:99:0,102,1425	0/0:35,0:35:99:0,99,1383	0/0:35,0:35:99:0,105,1450	0/0:41,0:41:99:0,117,1636	0/0:27,0:27:69.23:0,69,961	0/0:16,0:16:42.14:0,42,575	0/0:19,0:19:54.18:0,54,755	0/0:27,0:27:81.27:0,81,1131	0/0:22,0:22:63.21:0,63,880	0/0:27,0:27:75.25:0,75,1049	0/0:23,0:22:63.19:0,63,863	0/0:27,0:27:75.24:0,75,1030	0/0:22,0:22:63.20:0,63,865	0/0:27,0:27:81.27:0,81,1133	0/0:16,0:16:48.13:0,48,637	0/0:12,0:12:33.11:0,33,462
chr10	32066234	.	TCACACACA	T	1238.80	PASS	AC=14;AF=0.269;AN=52;BaseQRankSum=1.831;DP=616;FS=4.909;HRun=0;HaplotypeScore=225.6712;InbreedingCoeff=0.8095;MQ=59.15;MQ0=17;MQRankSum=-1.253;QD=9.60;ReadPosRankSum=2.225;VQSLOD=2.4840;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:35:12.51:0,13,302	0/0:10,0:11:18.01:0,18,412	./.	./.	0/0:21,0:21:30.09:0,30,658	0/0:20,0:22:33.58:0,34,814	0/0:27,0:30:33.01:0,33,821	1/1:10,7:16:4.44:146,4,0	0/0:8,0:12:12.04:0,12,317	0/0:16,0:16:28.34:0,28,640	1/1:18,0:15:0.32:0,0,0	0/0:25,0:25:26.22:0,26,658	0/0:23,0:24:41.75:0,42,1022	0/0:24,0:26:23.96:0,24,559	1/1:15,0:23:14.91:110,15,0	0/0:22,0:22:10.28:0,10,265	0/0:28,0:29:33.45:0,33,634	0/0:20,0:20:33.21:0,33,704	1/1:10,1:10:7.28:154,7,0	1/1:12,5:16:12.04:290,12,0	1/1:26,0:22:9.01:120,9,0	0/0:15,0:16:6.02:0,6,97	0/0:20,0:20:4.85:0,5,115	0/0:39,0:40:33.07:0,33,627	0/0:14,0:15:6.02:0,6,181	0/0:18,0:17:36.12:0,36,802	1/1:10,5:14:26.30:583,26,0	0/0:7,0:7:11.47:0,11,264
chr10	32066338	.	G	GT	7797.38	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-16.349;DP=599;FS=5.331;HRun=10;HaplotypeScore=89.4438;InbreedingCoeff=0.9813;MQ=78.36;MQ0=1;MQRankSum=-3.997;QD=22.87;ReadPosRankSum=3.935;VQSLOD=5.2464;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,33:39:62.47:843,62,0	0/0:2,0:8:14.26:0,14,42	0/0:16,0:15:26.87:0,27,209	0/0:19,0:20:33.64:0,34,251	0/0:3,0:28:50.93:0,51,149	0/0:2,0:15:28.52:0,29,83	0/0:2,0:15:20.36:0,20,60	0/0:6,0:23:30.54:0,31,88	0/0:5,0:18:28.51:0,29,84	1/1:4,20:24:51.11:534,51,0	1/1:4,17:21:51.13:541,51,0	1/1:2,16:19:20.09:422,20,0	1/1:5,16:21:23.34:453,23,0	1/1:4,19:23:48.06:498,48,0	0/0:24,0:25:56.87:0,57,465	1/1:3,22:27:59.82:604,60,0	1/1:3,22:25:45.09:480,45,0	1/1:2,19:21:44.94:480,45,0	0/0:4,0:16:24.90:0,25,74	0/0:1,0:19:35.53:0,36,118	0/0:5,0:31:42.77:0,43,124	1/1:4,25:29:53.34:745,53,0	1/1:1,12:13:33.08:352,33,0	1/1:4,29:33:69.01:735,69,0	1/1:1,18:19:29.44:506,29,0	1/1:5,18:23:10.69:509,11,0	0/0:6,0:24:34.62:0,35,100	1/1:0,3:3:9.02:96,9,0
chr10	32066425	.	AT	A	2465.86	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=6.447;DP=724;FS=10.044;HRun=6;HaplotypeScore=87.0353;InbreedingCoeff=0.9919;MQ=89.54;MQ0=0;MQRankSum=-1.072;QD=24.41;ReadPosRankSum=0.702;VQSLOD=2.7786;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,1:41:82.03:0,82,1335	1/1:0,11:11:24.06:258,24,0	0/0:30,0:30:51.31:0,51,772	0/0:26,0:26:64.83:0,65,761	1/1:6,18:24:57.12:598,57,0	1/1:2,23:24:63.16:676,63,0	1/1:3,20:23:54.13:580,54,0	0/0:28,0:28:66.20:0,66,845	1/1:3,15:18:53.83:529,54,0	0/0:35,0:35:99:0,99,1262	0/0:15,0:15:36.09:0,36,435	0/0:21,0:21:60.14:0,60,744	0/0:24,0:24:72.21:0,72,927	0/0:26,0:26:78.21:0,78,995	0/0:40,0:40:99:0,120,1550	0/0:31,1:32:61.18:0,61,1099	0/0:26,0:26:78.24:0,78,1012	0/0:11,0:11:24.08:0,24,316	0/0:30,0:30:84.21:0,84,1027	0/0:31,0:31:84.25:0,84,1077	0/0:32,0:32:81.26:0,81,1064	0/0:23,0:23:60.20:0,60,789	0/0:24,0:24:66.19:0,66,838	0/0:16,0:16:48.14:0,48,616	0/0:33,0:33:87.28:0,87,1143	0/0:28,0:28:78.23:0,78,989	0/0:43,0:43:99:0,126,1628	0/0:8,0:8:12.04:0,12,158
chr10	32067322	.	A	ATT	7874.14	PASS	AB=0.995;AC=45;AF=0.804;AN=56;BaseQRankSum=8.664;DP=510;FS=2.471;HRun=0;HaplotypeScore=227.4354;InbreedingCoeff=0.3752;MQ=79.53;MQ0=0;MQRankSum=-8.762;QD=16.90;ReadPosRankSum=7.717;VQSLOD=4.7174;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:25:2.42:55,0,2	1/1:2,1:3:8.95:84,9,0	0/0:23,0:23:63.21:0,63,965	0/0:21,0:21:33.33:0,33,645	1/1:7,17:24:63.11:808,63,0	1/1:7,15:22:56.61:692,57,0	1/1:7,8:15:41.51:454,42,0	1/1:22,10:32:92.07:874,92,0	1/1:5,13:18:53.94:633,54,0	0/1:19,0:19:11.60:12,0,68	1/1:17,0:17:25.66:79,26,0	1/1:14,0:14:22.42:63,22,0	1/1:22,0:22:35.05:101,35,0	1/1:21,0:21:12:74,12,0	1/1:3,24:27:77.82:1022,78,0	1/1:28,0:28:18.28:97,18,0	0/1:18,0:18:0.48:32,0,0	0/1:9,0:9:7.01:11,0,7	1/1:7,5:12:35.89:349,36,0	1/1:6,16:22:59.80:752,60,0	1/1:3,9:12:26.82:366,27,0	1/1:14,0:14:16.71:48,17,0	1/1:12,0:12:22.48:66,22,0	0/1:10,0:10:5.21:27,0,5	1/1:13,0:13:18.79:53,19,0	0/1:19,0:19:6.46:46,0,6	1/1:13,19:32:92.92:1076,93,0	0/1:6,0:6:1.42:1,0,27
chr10	32067324	.	T	TCTTTTAGTG	66746.44	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-5.515;DP=619;FS=0.000;HRun=0;HaplotypeScore=174.0591;InbreedingCoeff=0.9861;MQ=73.16;MQ0=0;MQRankSum=-10.129;QD=115.88;ReadPosRankSum=4.944;VQSLOD=5.6393;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:12,17:34:84.29:3502,84,0	1/1:4,0:5:15.05:712,15,0	0/0:22,0:22:63.18:0,63,1693	0/0:21,0:21:23.78:0,24,1162	1/1:12,0:29:72.23:2941,72,0	1/1:10,0:25:69.24:3075,69,0	1/1:11,0:19:51.18:2150,51,0	1/1:29,0:39:99:4778,117,0	1/1:7,0:20:60.21:2626,60,0	1/1:9,13:23:69.22:3069,69,0	1/1:8,12:23:60.16:2377,60,0	1/1:3,12:16:45.15:2149,45,0	1/1:5,20:28:66.70:3098,67,0	1/1:5,17:24:63.22:3001,63,0	1/1:6,0:30:90.31:4131,90,0	1/1:14,20:35:96.33:4152,96,0	1/1:6,14:25:39.13:1760,39,0	1/1:5,6:11:30.10:1307,30,0	1/1:10,0:15:45.15:1651,45,0	1/1:7,0:24:72.20:2961,72,0	1/1:4,0:13:30.10:1394,30,0	1/1:7,8:18:48.16:1858,48,0	1/1:5,11:17:39.09:1719,39,0	1/1:9,7:19:42.14:1602,42,0	1/1:4,10:15:42.14:1912,42,0	1/1:9,16:29:87.28:3768,87,0	1/1:11,1:34:96.29:4162,96,0	1/1:3,3:6:18.06:892,18,0
chr10	32067484	.	TA	T	2613.15	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=7.924;DP=593;FS=0.944;HRun=3;HaplotypeScore=60.7651;InbreedingCoeff=0.9962;MQ=87.41;MQ0=0;MQRankSum=-1.800;QD=31.87;ReadPosRankSum=2.548;VQSLOD=3.8365;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,99,1402	1/1:0,8:8:21.07:260,21,0	0/0:30,0:31:75.46:0,75,1172	0/0:26,0:26:71.44:0,71,911	1/1:0,19:19:57.18:706,57,0	1/1:1,23:24:66.21:818,66,0	1/1:1,7:8:21.07:260,21,0	0/0:33,0:33:90.26:0,90,1271	1/1:0,23:23:60.19:743,60,0	0/0:25,0:25:75.25:0,75,1065	0/0:22,0:22:63.21:0,63,906	0/0:16,0:16:48.16:0,48,691	0/0:21,0:21:63.15:0,63,863	0/0:19,0:19:54.18:0,54,777	0/0:26,0:26:75.24:0,75,1061	0/0:24,0:24:69.22:0,69,975	0/0:23,0:23:66.18:0,66,927	0/0:22,0:22:66.21:0,66,934	0/0:21,0:21:60.20:0,60,864	0/0:29,0:29:87.29:0,87,1253	0/0:20,0:20:60.20:0,60,863	0/0:17,0:17:51.17:0,51,734	0/0:11,0:11:33.11:0,33,475	0/0:23,0:23:57.19:0,57,821	0/0:20,0:20:57.16:0,57,782	0/0:18,0:18:54.18:0,54,778	0/0:24,0:24:69.20:0,69,969	0/0:6,0:6:18.06:0,18,259
chr10	32068083	.	AAAAAC	A	7826.34	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=13.549;DP=617;FS=14.539;HRun=0;HaplotypeScore=127.6997;InbreedingCoeff=0.9258;MQ=70.93;MQ0=1;MQRankSum=-5.060;QD=27.27;ReadPosRankSum=-1.046;VQSLOD=3.3878;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:19:42.10:0,42,1103	1/1:4,6:10:18.06:332,18,0	0/1:29,0:23:13.59:14,0,196	0/0:37,0:28:30.54:0,31,636	1/1:20,16:36:45.13:756,45,0	1/1:4,20:24:54.19:997,54,0	1/1:8,7:15:21.07:370,21,0	1/1:17,7:24:21.07:381,21,0	1/1:10,9:19:30.04:523,30,0	0/0:26,0:26:60.20:0,60,1560	0/0:29,0:29:63.22:0,63,1789	0/0:21,0:21:51.18:0,51,1380	0/0:25,0:25:54.19:0,54,1495	0/0:13,0:13:30.10:0,30,855	1/1:4,23:27:60.21:1109,60,0	0/0:22,0:22:51.16:0,51,1388	0/0:15,0:15:33.11:0,33,870	0/0:16,0:15:39.09:0,39,987	1/1:7,13:18:39.13:699,39,0	1/1:6,18:24:45.09:762,45,0	1/1:5,12:17:27.09:499,27,0	0/0:21,0:21:48.16:0,48,1353	0/0:13,0:13:27.09:0,27,723	0/0:21,0:21:48.14:0,48,1304	0/0:17,0:17:36.12:0,36,1026	0/0:26,0:26:69.23:0,69,1843	1/1:11,31:42:75.26:1383,75,0	0/0:8,0:8:21.07:0,21,598
chr10	32068464	.	A	AT	6898.85	PASS	AB=1.000;AC=51;AF=0.944;AN=54;BaseQRankSum=-2.548;DP=207;FS=16.762;HRun=5;HaplotypeScore=20.9151;InbreedingCoeff=0.2997;MQ=66.06;MQ0=2;MQRankSum=-1.895;QD=33.65;ReadPosRankSum=2.433;VQSLOD=2.6839;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,15:16:45.15:592,45,0	1/1:1,5:6:15.05:197,15,0	0/1:5,0:3:5.78:6,0,56	0/0:2,0:2:2.89:0,3,31	1/1:2,9:11:24.08:316,24,0	1/1:0,8:8:21.07:276,21,0	1/1:0,4:4:12.04:158,12,0	1/1:2,21:23:63.19:814,63,0	1/1:0,2:2:6.02:79,6,0	1/1:1,7:8:21.05:261,21,0	1/1:2,4:6:15.05:195,15,0	1/1:1,3:4:9.03:118,9,0	1/1:0,3:3:9.03:118,9,0	1/1:0,4:4:12.04:158,12,0	1/1:0,2:2:3.01:39,3,0	1/1:0,1:1:3.01:39,3,0	1/1:5,10:15:5.25:393,5,0	1/1:0,19:19:48.16:629,48,0	1/1:1,7:8:21.05:260,21,0	1/1:0,5:5:15.05:197,15,0	1/1:0,12:12:36.12:474,36,0	./.	1/1:0,1:1:3.01:39,3,0	1/1:0,8:8:24.08:316,24,0	1/1:0,8:8:24.08:316,24,0	1/1:1,5:6:15.05:197,15,0	1/1:0,9:9:21.07:276,21,0	1/1:0,11:11:33.11:434,33,0
chr10	32069249	.	ATATGTGTG	A	5250.59	PASS	AB=1.000;AC=16;AF=0.286;AN=56;BaseQRankSum=-4.036;DP=670;FS=2.980;HRun=0;HaplotypeScore=214.3202;InbreedingCoeff=0.6205;MQ=57.74;MQ0=5;MQRankSum=-3.942;QD=21.43;ReadPosRankSum=-2.868;VQSLOD=3.9690;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:66.09:0,66,725	0/0:0,0:8:15.05:0,15,421	0/0:16,0:8:13.88:0,14,412	0/0:17,0:9:14.37:0,14,296	0/1:12,0:24:79.02:79,0,602	0/1:9,0:27:50.67:51,0,903	0/1:6,0:20:44.83:45,0,321	1/1:0,33:33:92.83:1087,93,0	0/1:28,0:31:81.47:81,0,522	0/0:31,0:31:92.92:0,93,1101	0/0:21,0:21:51.10:0,51,547	0/0:40,0:40:96.46:0,96,1148	0/0:39,0:39:77.16:0,77,843	0/0:30,0:30:71.98:0,72,829	1/1:1,27:28:48.16:1385,48,0	0/0:45,0:45:99:0,114,1261	0/0:16,0:16:33.43:0,33,331	0/0:19,0:19:36.32:0,36,476	1/1:1,12:13:35.66:625,36,0	1/1:1,20:21:28.16:983,28,0	1/1:0,29:29:12.04:307,12,0	0/0:26,0:26:63.03:0,63,727	0/0:14,0:14:32.85:0,33,362	0/0:21,0:21:42.03:0,42,420	0/0:18,0:18:33.12:0,33,393	0/0:31,0:31:78.37:0,78,879	1/1:0,17:17:20.89:608,21,0	0/0:5,0:5:6.02:0,6,68
chr10	32069251	.	ATGTG	A	11639.14	PASS	AB=0.771;AC=42;AF=0.750;AN=56;BaseQRankSum=-6.030;DP=663;FS=7.085;HRun=0;HaplotypeScore=152.4238;InbreedingCoeff=0.7517;MQ=57.35;MQ0=5;MQRankSum=3.771;QD=21.71;ReadPosRankSum=3.063;VQSLOD=3.9272;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,19:28:45.15:732,45,0	0/0:8,0:8:14.94:0,15,262	0/1:17,0:9:16.08:16,0,161	0/0:17,0:9:6.01:0,6,113	0/0:25,0:25:27.30:0,27,466	0/0:27,0:27:36.12:0,36,639	0/0:18,0:18:12.04:0,12,210	1/1:33,0:33:14.94:129,15,0	0/0:17,0:31:20.64:0,21,310	1/1:12,19:31:54.12:815,54,0	1/1:5,15:20:39.13:634,39,0	1/1:10,28:39:78.26:1247,78,0	1/1:12,26:39:57.92:908,58,0	1/1:9,21:30:51.17:829,51,0	1/1:27,0:27:48.06:448,48,0	1/1:9,38:47:93.32:1513,93,0	1/1:6,10:16:20.60:341,21,0	0/1:3,15:19:15.77:569,0,16	1/1:14,0:13:18.02:167,18,0	1/1:21,0:21:35.99:320,36,0	1/1:29,0:29:10.26:88,10,0	1/1:8,18:26:37.19:721,37,0	1/1:4,10:14:20.93:342,21,0	1/1:5,14:19:24.08:390,24,0	1/1:5,11:17:27.09:418,27,0	1/1:11,16:28:48.13:718,48,0	1/1:17,0:17:20.94:194,21,0	1/1:3,2:5:6.02:98,6,0
chr10	32069425	.	TATGATGATG	T	20682.50	PASS	AB=1.000;AC=46;AF=0.821;AN=56;BaseQRankSum=-2.616;DP=574;FS=2.578;HRun=0;HaplotypeScore=208.1447;InbreedingCoeff=0.2419;MQ=66.44;MQ0=2;MQRankSum=-2.780;QD=39.02;ReadPosRankSum=6.852;VQSLOD=4.1239;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,10:11:18.06:516,18,0	0/1:11,0:11:57.53:58,0,96	0/0:25,0:24:45.07:0,45,1450	0/0:19,0:18:9.56:0,10,917	0/1:24,0:24:69.39:387,0,69	0/1:13,0:13:49.50:49,0,107	0/1:13,0:13:10.85:136,0,11	1/1:24,0:24:40.56:580,41,0	0/1:12,0:12:34.79:187,0,35	1/1:4,29:33:87.28:2422,87,0	1/1:8,21:29:48.16:1353,48,0	1/1:4,23:27:54.19:1534,54,0	1/1:5,19:24:42.14:1203,42,0	1/1:6,18:24:39.13:1103,39,0	0/1:24,0:24:99:244,0,136	1/1:4,28:32:51.17:1432,51,0	1/1:2,8:10:18.06:453,18,0	1/1:3,4:7:9.03:242,9,0	1/1:17,0:15:24.06:284,24,0	1/1:27,0:27:69.12:990,69,0	1/1:10,0:10:20.98:301,21,0	1/1:8,10:19:27.09:751,27,0	1/1:4,22:26:57.20:1572,57,0	1/1:3,10:13:12.04:324,12,0	1/1:7,28:35:66.23:1861,66,0	1/1:0,18:18:54.13:1474,54,0	1/1:31,0:31:60.03:712,60,0	1/1:8,8:16:18.06:515,18,0
chr10	32069439	.	TGA	T	3567.16	PASS	AB=0.939;AC=40;AF=0.714;AN=56;BaseQRankSum=12.146;DP=527;FS=35.561;HRun=0;HaplotypeScore=198.3969;InbreedingCoeff=-0.1117;MQ=50.67;MQ0=2;MQRankSum=-7.255;QD=7.34;ReadPosRankSum=13.329;VQSLOD=0.4768;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:13,0:13:19.40:51,0,19	1/1:0,8:8:23.70:158,24,0	0/0:25,0:22:62.68:0,63,983	0/0:16,0:15:41.85:0,42,632	1/1:9,19:28:9.79:226,10,0	1/1:4,9:13:9:146,9,0	1/1:9,4:13:3.95:72,4,0	0/1:23,6:29:99:112,0,521	1/1:3,6:9:8.96:121,9,0	0/1:33,0:33:66.60:240,0,67	1/1:22,0:22:40.99:171,41,0	1/1:25,0:25:8.79:157,9,0	1/1:21,0:21:2.40:124,2,0	0/1:20,0:20:40.83:101,0,41	1/1:5,14:19:28.24:284,28,0	1/1:29,0:29:36.99:169,37,0	0/1:9,0:9:22.39:32,0,22	0/1:7,0:7:11.10:11,0,64	0/1:9,6:13:80.61:127,0,81	1/1:7,19:26:25.81:350,26,0	1/1:4,7:11:1.97:98,2,0	0/1:14,0:14:72.27:72,0,83	1/1:24,0:24:30.85:161,31,0	0/1:14,0:14:20.87:21,0,33	0/1:30,0:30:21.74:171,0,22	0/1:21,0:21:76.92:135,0,77	0/1:15,9:24:26.96:187,0,27	1/1:9,0:9:16.33:69,16,0
chr10	32069453	.	GTTA	G	1761.69	PASS	AB=0.906;AC=15;AF=0.268;AN=56;BaseQRankSum=-0.260;DP=536;FS=4.766;HRun=0;HaplotypeScore=219.6390;InbreedingCoeff=0.5432;MQ=46.37;MQ0=3;MQRankSum=-4.545;QD=9.32;ReadPosRankSum=-2.552;VQSLOD=2.8211;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:29.84:0,30,318	0/1:8,1:9:44.01:44,0,49	0/0:22,0:19:39.07:0,39,612	0/0:12,0:10:24.03:0,24,410	0/1:26,3:29:82.51:83,0,264	0/1:15,0:15:28.36:28,0,182	0/0:13,0:13:7.30:0,7,208	1/1:34,0:34:57.24:327,57,0	0/1:7,2:9:57.50:60,0,57	0/0:33,0:33:87.02:0,87,1081	0/0:20,0:20:52.13:0,52,527	0/0:24,0:24:66.11:0,66,820	0/0:21,0:21:55.82:0,56,660	0/0:21,0:21:53.60:0,54,635	0/1:17,2:19:6.71:7,0,160	0/0:31,0:31:71.84:0,72,945	0/0:12,0:12:26.74:0,27,277	0/0:8,0:8:20.92:0,21,273	1/1:4,13:16:40.75:352,41,0	1/1:8,17:25:50.82:516,51,0	1/1:9,3:12:22.10:185,22,0	0/0:17,0:17:50.63:0,51,724	0/0:24,0:24:54.09:0,54,610	0/0:14,0:14:20.01:0,20,235	0/0:32,0:32:80.99:0,81,1010	0/0:22,0:22:63.13:0,63,868	1/1:13,7:20:38.53:347,39,0	0/0:9,0:9:21.91:0,22,208
chr10	32069628	.	T	TTG	12501.37	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=9.285;DP=570;FS=0.000;HRun=0;HaplotypeScore=97.2522;InbreedingCoeff=0.9978;MQ=83.08;MQ0=0;MQRankSum=-4.885;QD=51.66;ReadPosRankSum=-1.705;VQSLOD=4.8402;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:75.24:0,75,1128	1/1:2,12:14:36.12:670,36,0	0/0:21,0:21:60.19:0,60,898	0/0:16,0:16:32.09:0,32,503	1/1:2,31:33:90.31:1703,90,0	1/1:5,24:29:75.25:1402,75,0	1/1:2,8:10:18.06:348,18,0	1/1:4,32:37:99:2024,108,0	1/1:2,17:19:54.18:1037,54,0	0/0:27,0:27:78.26:0,78,1195	0/0:19,0:19:57.19:0,57,871	0/0:26,0:26:78.26:0,78,1179	0/0:29,0:29:87.25:0,87,1278	0/0:15,0:15:45.15:0,45,689	1/1:1,20:21:60.21:1155,60,0	0/0:29,0:29:87.30:0,87,1331	0/0:16,0:16:48.16:0,48,735	0/0:15,0:15:37.89:0,38,569	1/1:4,22:26:69.24:1333,69,0	1/1:1,7:8:21.07:400,21,0	1/1:2,11:13:33.11:617,33,0	0/0:8,0:8:24.07:0,24,348	0/0:11,0:11:33.11:0,33,505	0/0:20,0:20:54.17:0,54,805	0/0:18,0:18:54.17:0,54,806	0/0:16,0:16:48.16:0,48,735	1/1:2,30:32:96.33:1813,96,0	0/0:16,0:16:42.14:0,42,643
chr10	32070145	.	C	CT	2556.71	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=7.085;DP=465;FS=1.548;HRun=6;HaplotypeScore=82.1746;InbreedingCoeff=0.9800;MQ=85.75;MQ0=0;MQRankSum=-1.930;QD=28.10;ReadPosRankSum=-1.512;VQSLOD=3.5960;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:48.09:0,48,482	0/0:10,0:10:27.05:0,27,270	0/0:18,0:18:45.02:0,45,444	0/0:12,0:12:29.82:0,30,258	0/0:28,0:28:78.16:0,78,787	0/0:20,0:20:54.07:0,54,533	0/0:8,0:8:21.05:0,21,214	1/1:6,27:33:78.21:945,78,0	0/0:16,0:16:42.07:0,42,415	0/0:21,0:21:63.14:0,63,638	0/0:17,0:17:45.06:0,45,439	0/0:22,0:23:62.14:0,62,604	0/0:23,0:23:60.10:0,60,597	0/0:19,0:19:57.13:0,57,581	0/0:31,0:31:87.14:0,87,861	0/0:16,0:16:42.09:0,42,428	0/0:13,0:13:35.57:0,36,346	0/0:7,0:7:16.40:0,16,161	1/1:2,18:20:54.17:669,54,0	1/1:1,14:15:39.09:475,39,0	1/1:2,8:10:24.08:302,24,0	0/0:4,0:4:12.02:0,12,116	0/0:16,0:16:39.08:0,39,397	0/0:14,0:14:36.08:0,36,367	0/0:9,0:9:21.04:0,21,214	0/0:25,0:25:72.15:0,72,729	1/1:2,11:13:27.09:340,27,0	0/0:4,0:4:12.03:0,12,122
chr10	32070433	.	GT	G	4325.03	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=15.513;DP=438;FS=3.326;HRun=8;HaplotypeScore=61.3136;InbreedingCoeff=0.9717;MQ=74.69;MQ0=0;MQRankSum=-0.372;QD=24.16;ReadPosRankSum=-1.266;VQSLOD=5.2086;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:30.09:0,30,362	1/1:2,7:9:18.02:174,18,0	0/0:9,0:9:27.07:0,27,303	0/0:7,0:7:8.89:0,9,88	1/1:2,12:14:36.06:348,36,0	1/1:0,20:21:62.13:585,62,0	1/1:1,5:6:15.02:145,15,0	1/1:4,19:23:57.07:543,57,0	1/1:3,15:18:42.07:406,42,0	0/0:19,0:19:57.17:0,57,688	0/0:24,0:24:54.17:0,54,652	0/0:14,0:14:36.11:0,36,434	0/0:13,0:13:39.12:0,39,471	0/0:19,0:19:54.17:0,54,652	1/1:0,18:18:48.08:463,48,0	0/0:11,0:11:30.07:0,30,339	0/0:20,0:20:51.16:0,51,616	0/0:21,0:21:45.14:0,45,544	1/1:3,12:15:36.06:348,36,0	1/1:1,19:20:53.92:497,54,0	1/1:1,2:3:6.01:58,6,0	0/0:15,0:15:36.11:0,36,435	0/0:22,0:22:63.19:0,63,761	0/0:8,0:8:24.07:0,24,290	0/0:13,0:13:39.12:0,39,471	0/0:24,0:24:69.19:0,69,805	1/1:2,29:32:80.15:759,80,0	0/0:7,0:7:21.06:0,21,254
chr10	32070726	.	GTA	G	5979.64	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=16.102;DP=550;FS=1.972;HRun=0;HaplotypeScore=86.4221;InbreedingCoeff=0.9392;MQ=80.57;MQ0=0;MQRankSum=-1.620;QD=26.00;ReadPosRankSum=-0.681;VQSLOD=5.6856;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:63.19:0,63,1026	0/1:6,0:6:2.02:96,0,2	0/0:14,0:14:30.10:0,30,503	0/0:15,0:15:36.12:0,36,606	1/1:31,0:31:69.72:559,70,0	1/1:28,0:28:38.87:439,39,0	1/1:14,0:14:8.98:208,9,0	1/1:4,21:25:63.11:779,63,0	1/1:13,0:13:13.98:255,14,0	0/0:27,0:27:75.25:0,75,1274	0/0:23,0:23:66.21:0,66,1115	0/0:17,0:17:48.16:0,48,821	0/0:26,0:26:78.25:0,78,1322	0/0:18,0:18:54.18:0,54,933	1/1:1,28:29:72.24:958,72,0	0/0:18,0:18:27.23:0,27,758	0/0:21,0:21:57.17:0,57,956	0/0:17,0:17:33.11:0,33,544	1/1:2,18:20:54.15:679,54,0	1/1:2,14:16:42.14:555,42,0	1/1:0,13:13:36.12:479,36,0	0/0:15,0:15:36.11:0,36,596	0/0:27,0:27:72.25:0,72,1237	0/0:10,0:10:27.09:0,27,467	0/0:19,0:19:48.14:0,48,777	0/0:24,0:24:69.23:0,69,1171	1/1:4,31:35:75.18:975,75,0	0/0:6,0:6:15.05:0,15,259
chr10	32070734	.	ATC	A	4778.33	PASS	AB=1.000;AC=18;AF=0.321;AN=56;BaseQRankSum=17.210;DP=551;FS=1.080;HRun=0;HaplotypeScore=89.6368;InbreedingCoeff=0.6594;MQ=80.74;MQ0=0;MQRankSum=0.675;QD=20.60;ReadPosRankSum=2.734;VQSLOD=5.3381;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:63.19:0,63,1216	1/1:0,7:7:15.05:244,15,0	0/0:13,0:13:33.02:0,33,583	0/0:15,0:15:36.59:0,37,723	1/1:0,27:27:78.14:1182,78,0	1/1:0,24:24:60.20:977,60,0	1/1:0,15:15:30.10:489,30,0	0/1:29,0:29:99:158,0,128	1/1:0,13:13:36.12:586,36,0	0/0:27,0:27:81.27:0,81,1573	0/0:23,0:23:69.21:0,69,1317	0/0:17,0:17:51.16:0,51,996	0/0:29,0:29:84.25:0,84,1605	0/0:19,0:19:54.19:0,54,1092	1/1:29,0:29:47.17:339,47,0	0/0:17,1:18:2.21:0,2,882	0/0:21,0:21:60.12:0,60,1119	0/0:12,0:12:33.04:0,33,583	0/1:20,0:20:6.02:150,0,6	0/1:18,0:18:47.63:160,0,48	1/1:13,0:13:34.64:188,35,0	0/0:13,0:13:36.12:0,36,718	0/0:28,0:28:80.61:0,81,1511	0/0:10,0:10:30.09:0,30,571	0/0:19,0:19:54.19:0,54,1040	0/0:27,0:27:81.26:0,81,1554	0/1:37,0:37:52.81:305,0,53	0/0:6,0:6:17.80:0,18,315
chr10	32070956	.	AGCAAAG	A	15155.17	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-13.494;DP=585;FS=1.411;HRun=0;HaplotypeScore=188.0213;InbreedingCoeff=0.9737;MQ=88.65;MQ0=0;MQRankSum=-18.292;QD=57.19;ReadPosRankSum=5.318;VQSLOD=5.2013;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,13:13:18.06:429,18,0	0/0:11,0:11:33.11:0,33,1184	0/0:27,0:27:81.27:0,81,2634	0/0:25,0:25:69.20:0,69,2057	0/0:29,0:29:87.28:0,87,2889	0/0:39,0:39:99:0,117,4099	0/0:17,0:17:51.15:0,51,1644	0/0:36,0:36:99:0,105,3701	0/0:16,0:16:48.16:0,48,1725	1/1:1,18:19:54.17:1249,54,0	1/1:1,21:22:48.16:1153,48,0	1/1:2,15:17:42.14:1009,42,0	1/1:3,31:34:75.26:1766,75,0	1/1:1,21:22:57.20:1369,57,0	0/0:33,1:34:24.28:0,24,3239	1/1:4,31:35:84.29:2018,84,0	1/1:0,3:3:6.02:144,6,0	1/1:0,3:3:9.03:216,9,0	0/0:16,0:16:45.14:0,45,1451	0/0:21,0:21:63.22:0,63,2114	0/0:17,0:17:48.16:0,48,1660	1/1:0,15:15:33.11:793,33,0	1/1:0,19:19:51.18:1225,51,0	1/1:0,11:11:14.50:356,15,0	1/1:0,22:22:63.22:1497,63,0	1/1:2,19:21:57.18:1302,57,0	0/0:32,0:31:90.31:0,90,3153	1/1:0,9:9:27.09:631,27,0
chr10	32070996	.	CAA	C	1171.46	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.517;DP=652;FS=6.030;HRun=3;HaplotypeScore=168.0336;InbreedingCoeff=0.9896;MQ=92.94;MQ0=0;MQRankSum=-0.195;QD=35.50;ReadPosRankSum=2.867;VQSLOD=3.2792;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:54.19:0,54,1042	0/0:6,0:6:18.05:0,18,317	0/0:33,0:33:93.31:0,93,1749	0/0:30,0:30:78.20:0,78,1395	0/0:35,0:35:99:0,105,2009	0/0:34,0:34:96.33:0,96,1854	0/0:15,0:15:45.15:0,45,838	0/0:30,0:29:84.28:0,84,1590	0/0:22,0:22:63.22:0,63,1217	0/0:23,0:23:69.24:0,69,1331	0/0:20,0:20:60.12:0,60,1082	0/0:20,0:20:57.13:0,57,1026	0/0:35,0:35:99:0,102,1835	0/0:27,0:27:81.23:0,81,1525	1/1:2,31:33:67.30:1266,67,0	0/0:37,0:37:99:0,108,2005	0/0:10,0:9:24.08:0,24,446	0/0:13,0:13:39.13:0,39,752	0/0:22,0:22:66.22:0,66,1235	0/0:25,0:25:75.21:0,75,1411	0/0:21,0:21:60.21:0,60,1151	0/0:15,0:15:45.15:0,45,868	0/0:19,0:19:57.11:0,57,1024	0/0:13,0:13:36.12:0,36,695	0/0:23,0:23:63.17:0,63,1177	0/0:24,0:24:72.24:0,72,1353	0/0:36,0:35:99:0,102,1934	0/0:11,0:11:33.08:0,33,599
chr10	32071468	.	C	CCT	12013.30	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-6.825;DP=643;FS=11.221;HRun=0;HaplotypeScore=98.5474;InbreedingCoeff=0.9996;MQ=80.61;MQ0=0;MQRankSum=-6.250;QD=49.44;ReadPosRankSum=0.317;VQSLOD=4.9394;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:54.18:0,54,785	1/1:0,8:8:24.08:449,24,0	0/0:21,0:21:48.20:0,48,819	0/0:20,0:20:51.63:0,52,727	1/1:2,21:23:51.17:954,51,0	1/1:3,18:21:54.18:1010,54,0	1/1:0,15:15:42.14:786,42,0	1/1:1,31:34:99:1701,99,0	1/1:2,23:25:69.24:1271,69,0	0/0:29,0:29:78.23:0,78,1125	0/0:19,0:19:57.19:0,57,839	0/0:26,0:26:75.25:0,75,1103	0/0:40,0:40:99:0,114,1675	0/0:29,0:29:75.25:0,75,1103	1/1:0,19:19:57.20:1065,57,0	0/0:30,0:30:84.22:0,84,1173	0/0:18,0:18:51.17:0,51,749	0/0:14,0:14:39.08:0,39,530	1/1:3,15:19:54.12:874,54,0	1/1:6,22:28:75.24:1364,75,0	1/1:1,20:21:48.16:898,48,0	0/0:24,0:24:69.23:0,69,1016	0/0:25,0:25:75.24:0,75,1083	0/0:25,0:25:72.24:0,72,1056	0/0:20,0:20:60.20:0,60,882	0/0:29,0:29:84.28:0,84,1218	1/1:3,27:30:90.27:1641,90,0	0/0:10,0:10:30.10:0,30,442
chr10	32071518	.	G	GT	2589.01	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=16.910;DP=541;FS=26.397;HRun=0;HaplotypeScore=182.4915;InbreedingCoeff=0.9736;MQ=93.55;MQ0=0;MQRankSum=-15.316;QD=17.86;ReadPosRankSum=2.616;VQSLOD=2.1803;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:81.09:0,81,1062	1/1:0,4:4:11.82:77,12,0	0/0:31,0:31:81.27:0,81,1114	0/0:25,0:25:72.23:0,72,985	1/1:1,12:13:32.39:203,32,0	1/1:0,23:26:77.01:563,77,0	1/1:0,10:11:32.54:217,33,0	1/1:1,5:6:14.97:119,15,0	1/1:0,14:15:43.53:329,44,0	0/0:25,0:24:72.23:0,72,991	0/0:12,0:12:33.11:0,33,461	0/0:35,0:35:99:0,99,1381	0/0:40,0:40:99:0,111,1485	0/0:31,0:30:87.29:0,87,1216	1/1:0,25:25:71:470,71,0	0/0:34,0:34:96.32:0,96,1342	0/0:17,0:15:45.15:0,45,629	0/0:6,0:6:18.05:0,18,235	1/1:1,5:6:17.94:162,18,0	1/1:1,16:17:44.19:282,44,0	1/1:1,3:4:8.85:57,9,0	0/0:15,0:15:45.14:0,45,612	0/0:20,0:20:54.18:0,54,755	0/0:23,0:23:63.21:0,63,881	0/0:22,0:22:63.21:0,63,881	0/0:27,0:27:81.26:0,81,1116	1/1:1,17:18:50.30:333,50,0	0/0:3,0:3:9.03:0,9,125
chr10	32071524	.	ACATTAGC	A	7350.52	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=17.037;DP=528;FS=22.661;HRun=0;HaplotypeScore=233.3208;InbreedingCoeff=0.9653;MQ=93.38;MQ0=0;MQRankSum=-15.273;QD=54.45;ReadPosRankSum=3.951;VQSLOD=3.4420;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:31:84.29:0,84,3323	1/1:0,4:4:12.04:225,12,0	0/0:32,0:32:90.30:0,90,2979	0/0:23,0:23:66.22:0,66,2183	1/1:0,12:12:30.10:561,30,0	1/1:0,23:23:69.24:1299,69,0	1/1:0,10:10:30.10:556,30,0	1/1:0,5:5:15.05:287,15,0	1/1:0,15:15:45.14:798,45,0	0/0:27,0:26:72.23:0,72,2856	0/0:11,0:11:33.11:0,33,1206	0/0:38,0:38:99:0,108,4267	0/0:36,0:36:99:0,108,4409	0/0:34,0:33:96.33:0,96,3902	1/1:0,24:24:72.25:1341,72,0	0/0:33,0:33:96.32:0,96,3804	0/0:17,0:15:45.15:0,45,1638	0/0:5,0:5:15.05:0,15,573	1/1:0,5:5:15.05:288,15,0	1/1:0,17:17:45.15:870,45,0	1/1:0,3:3:9.03:169,9,0	0/0:13,0:13:39.13:0,39,1548	0/0:18,0:18:51.18:0,51,2042	0/0:22,0:22:60.21:0,60,2517	0/0:21,0:21:63.21:0,63,2477	0/0:29,0:29:87.30:0,87,3298	1/1:0,17:17:51.17:956,51,0	0/0:2,0:2:6.02:0,6,156
chr10	32071629	.	CT	C	13054.55	PASS	AB=0.833;AC=54;AF=0.964;AN=56;BaseQRankSum=2.974;DP=441;FS=0.000;HRun=2;HaplotypeScore=293.1639;InbreedingCoeff=-0.0458;MQ=51.40;MQ0=0;MQRankSum=-3.769;QD=29.60;ReadPosRankSum=2.699;VQSLOD=3.7699;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,25:24:54.18:699,54,0	1/1:1,5:6:15.05:194,15,0	0/1:3,1:4:16.86:41,0,17	0/1:11,2:13:88.18:95,0,88	1/1:1,13:14:21.05:271,21,0	1/1:1,14:15:42.14:543,42,0	1/1:1,4:5:12.04:155,12,0	1/1:3,18:21:51.16:660,51,0	1/1:2,18:20:51.10:639,51,0	1/1:1,16:16:42.61:545,43,0	1/1:1,9:10:21:271,21,0	1/1:4,26:30:81.26:1043,81,0	1/1:2,34:36:96.31:1241,96,0	1/1:4,36:39:99:1318,102,0	1/1:1,14:15:42.14:543,42,0	1/1:2,23:25:69.22:892,69,0	1/1:1,13:13:27.02:349,27,0	1/1:0,5:5:15.05:194,15,0	1/1:4,13:17:39.13:503,39,0	1/1:2,14:16:27.09:349,27,0	1/1:1,10:11:14.72:194,15,0	1/1:0,11:11:27.09:349,27,0	1/1:0,12:12:12.02:155,12,0	1/1:0,9:9:8.70:116,9,0	1/1:4,5:9:18.05:221,18,0	1/1:0,19:19:57.19:736,57,0	1/1:2,17:19:48.16:621,48,0	1/1:0,3:3:9.03:116,9,0
chr10	32071636	.	AC	A	9970.71	PASS	AB=0.858;AC=54;AF=0.964;AN=56;BaseQRankSum=2.719;DP=417;FS=2.381;HRun=4;HaplotypeScore=295.5712;InbreedingCoeff=-0.0123;MQ=52.20;MQ0=0;MQRankSum=-3.417;QD=23.91;ReadPosRankSum=2.491;VQSLOD=2.9069;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,20:24:47.76:455,48,0	1/1:0,5:5:14.95:146,15,0	0/1:3,0:4:17.56:34,0,18	0/1:10,1:11:12.43:12,0,45	1/1:2,13:15:20.17:156,20,0	1/1:2,12:14:35.96:394,36,0	1/1:0,4:4:9.03:107,9,0	1/1:2,16:18:48.15:573,48,0	1/1:4,16:20:45.14:538,45,0	1/1:3,14:16:39.05:437,39,0	1/1:0,9:9:20.92:219,21,0	1/1:5,24:29:72.22:858,72,0	1/1:5,29:34:89.96:1032,90,0	1/1:2,35:36:98.84:1074,99,0	1/1:2,12:14:35.96:394,36,0	1/1:4,21:25:62.98:698,63,0	1/1:1,12:12:24:287,24,0	1/1:3,2:5:6.02:70,6,0	1/1:4,11:15:33.10:393,33,0	1/1:3,11:14:23.87:220,24,0	1/1:4,6:10:14.55:81,15,0	1/1:2,9:11:26.69:245,27,0	1/1:6,6:12:8.63:46,9,0	1/1:0,9:9:8.91:91,9,0	1/1:2,4:6:14.93:135,15,0	1/1:2,17:19:51.16:609,51,0	1/1:1,18:19:48.08:555,48,0	1/1:0,3:3:9.03:108,9,0
chr10	32071654	.	G	GC	16322.19	PASS	AB=0.833;AC=55;AF=0.982;AN=56;BaseQRankSum=-0.359;DP=442;FS=6.053;HRun=0;HaplotypeScore=219.2413;InbreedingCoeff=-0.0257;MQ=56.52;MQ0=0;MQRankSum=-2.934;QD=36.93;ReadPosRankSum=2.606;VQSLOD=3.7423;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,22:22:51.17:813,51,0	1/1:1,4:5:9.03:144,9,0	1/1:3,3:7:12.18:231,12,0	0/1:3,1:5:16.07:40,0,16	1/1:1,16:17:27.09:425,27,0	1/1:3,14:17:33.11:516,33,0	1/1:2,9:11:33.10:503,33,0	1/1:4,15:19:54.18:840,54,0	1/1:2,18:20:51.17:813,51,0	1/1:0,17:16:39.12:600,39,0	1/1:0,18:18:32.87:526,33,0	1/1:0,28:28:78.10:1243,78,0	1/1:0,25:25:72.25:1142,72,0	1/1:0,29:28:63.21:1004,63,0	1/1:1,18:19:45.15:717,45,0	1/1:2,26:28:72.25:1149,72,0	1/1:0,15:14:39.13:621,39,0	1/1:0,3:3:9.03:144,9,0	1/1:2,10:12:33.09:498,33,0	1/1:0,19:19:41.73:670,42,0	1/1:1,13:14:20.81:335,21,0	1/1:1,14:15:27.09:431,27,0	1/1:0,13:13:23.98:383,24,0	1/1:0,12:12:17.85:287,18,0	1/1:0,11:11:21.07:336,21,0	1/1:2,15:17:51.12:765,51,0	1/1:1,20:21:63.21:1004,63,0	1/1:0,3:3:9.03:144,9,0
chr10	32071967	.	TA	T	3164.39	PASS	AB=0.857;AC=13;AF=0.232;AN=56;BaseQRankSum=10.267;DP=407;FS=7.332;HRun=6;HaplotypeScore=68.6059;InbreedingCoeff=0.8872;MQ=60.29;MQ0=2;MQRankSum=0.036;QD=24.34;ReadPosRankSum=-0.965;VQSLOD=2.8679;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:42.14:0,42,553	0/0:4,0:4:12.04:0,12,158	0/1:5,1:6:14.20:14,0,173	0/0:11,0:6:15.04:0,15,184	0/0:19,0:19:39.13:0,39,513	0/0:20,0:20:54.16:0,54,696	0/0:15,0:15:45.14:0,45,573	1/1:1,18:17:48.12:513,48,0	0/0:7,0:7:21.07:0,21,276	0/0:19,0:19:51.11:0,51,626	0/0:16,0:16:39.10:0,39,496	0/0:12,0:12:30.10:0,30,395	0/0:9,0:9:27.09:0,27,355	0/0:13,0:13:33.11:0,33,434	1/1:0,19:19:48.12:516,48,0	0/0:7,0:7:18.06:0,18,237	0/0:20,0:20:57.17:0,57,734	0/0:9,0:9:27.09:0,27,350	1/1:3,16:19:45.10:476,45,0	1/1:1,29:30:78.19:836,78,0	1/1:1,7:8:15.04:160,15,0	0/0:15,0:15:42.14:0,42,546	0/0:10,0:10:27.09:0,27,351	0/0:18,0:17:51.16:0,51,657	0/0:12,0:12:36.12:0,36,473	0/0:16,0:16:45.13:0,45,572	1/1:3,26:29:78.19:838,78,0	0/0:9,0:9:18.06:0,18,237
chr10	32072075	.	ATT	A	2467.87	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=14.001;DP=472;FS=20.590;HRun=3;HaplotypeScore=72.3056;InbreedingCoeff=0.9883;MQ=67.51;MQ0=1;MQRankSum=-6.135;QD=24.68;ReadPosRankSum=0.309;VQSLOD=1.0104;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:48.16:0,48,927	0/0:4,0:4:12.04:0,12,215	0/0:11,0:11:33.11:0,33,616	0/0:13,0:11:26.01:0,26,446	0/0:31,0:31:93.28:0,93,1698	0/0:31,0:31:93.30:0,93,1717	0/0:14,0:14:42.14:0,42,812	1/1:5,11:9:21.05:215,21,0	0/0:12,0:12:36.12:0,36,688	0/0:28,0:28:84.29:0,84,1607	0/0:23,0:23:69.19:0,69,1283	0/0:13,0:13:39.13:0,39,754	0/0:22,0:22:66.23:0,66,1267	0/0:14,0:14:42.14:0,42,812	1/1:1,11:12:33.08:360,33,0	0/0:13,0:13:36.12:0,36,696	0/0:12,0:12:36.12:0,36,691	0/0:12,0:12:33.11:0,33,638	1/1:1,8:7:18.05:210,18,0	1/1:3,18:21:54.12:575,54,0	1/1:1,7:8:21:210,21,0	0/0:17,0:17:48.16:0,48,928	0/0:20,0:20:60.19:0,60,1127	0/0:15,0:14:39.13:0,39,754	0/0:15,0:15:45.15:0,45,870	0/0:29,0:29:87.30:0,87,1675	1/1:2,32:34:99:1085,102,0	0/0:6,0:6:18.06:0,18,348
chr10	32072079	.	CT	C	2108.08	PASS	AB=0.579;AC=11;AF=0.196;AN=56;BaseQRankSum=13.791;DP=472;FS=15.510;HRun=3;HaplotypeScore=64.5327;InbreedingCoeff=0.8773;MQ=69.87;MQ0=0;MQRankSum=-6.167;QD=21.73;ReadPosRankSum=-0.048;VQSLOD=2.0809;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:45.15:0,45,674	0/0:3,0:3:9.03:0,9,135	0/0:11,0:11:33.09:0,33,460	0/0:12,0:12:34.53:0,35,422	0/0:29,0:29:87.29:0,87,1303	0/0:29,0:29:87.29:0,87,1303	0/0:14,0:14:42.14:0,42,630	1/1:0,14:10:29.95:264,30,0	0/0:12,0:12:33.11:0,33,495	0/0:31,0:31:93.30:0,93,1345	0/0:25,0:25:72.24:0,72,1076	0/0:14,0:14:42.13:0,42,609	0/0:23,0:23:69.23:0,69,1027	0/0:15,0:15:45.15:0,45,674	1/1:0,12:12:35.95:320,36,0	0/0:13,0:13:39.13:0,39,584	0/0:12,0:12:33.11:0,33,494	0/0:12,0:12:33.11:0,33,495	0/1:3,8:9:13.22:189,0,13	1/1:1,18:19:56.84:474,57,0	1/1:0,8:8:19.23:177,19,0	0/0:18,0:18:54.17:0,54,787	0/0:20,0:20:60.19:0,60,876	0/0:15,0:14:39.13:0,39,585	0/0:16,0:16:45.15:0,45,675	0/0:29,0:29:87.29:0,87,1303	1/1:0,33:33:98.88:862,99,0	0/0:6,0:6:18.06:0,18,270
chr10	32072724	.	T	TATGTATGA	12701.77	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=4.389;DP=721;FS=0.000;HRun=0;HaplotypeScore=314.5793;InbreedingCoeff=-0.2645;MQ=54.87;MQ0=0;MQRankSum=-8.776;QD=20.23;ReadPosRankSum=-10.666;VQSLOD=0.6322;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:0.84:0,1,507	0/1:14,0:14:99:158,0,198	0/0:21,0:18:18.05:0,18,343	0/0:16,0:16:24.05:0,24,339	0/1:31,0:31:99:313,0,224	0/1:22,0:22:99:201,0,427	0/1:18,0:18:82.38:82,0,425	1/1:49,0:49:99:1437,103,0	0/1:22,0:22:99:521,0,211	0/1:34,0:34:99:799,0,449	0/1:19,0:19:99:140,0,231	0/1:36,0:36:99:230,0,422	0/1:42,0:42:99:624,0,357	0/1:31,0:31:99:238,0,419	1/1:31,0:31:64.56:1310,65,0	0/1:30,0:30:99:413,0,503	0/1:22,0:22:99:101,0,284	0/0:9,0:9:23.93:0,24,251	1/1:25,0:25:50.97:1069,51,0	1/1:36,0:36:81.19:1967,81,0	1/1:13,0:13:27.04:317,27,0	0/1:19,0:19:99:185,0,160	0/1:31,0:31:99:434,0,151	0/0:18,0:18:7.09:0,7,355	0/1:27,0:27:99:424,0,356	0/1:35,0:35:99:456,0,860	1/1:13,20:34:29.85:1212,30,0	0/1:7,0:7:70.07:70,0,77
chr10	32072740	.	A	AATGT	8636.17	PASS	AB=0.971;AC=24;AF=0.429;AN=56;BaseQRankSum=4.733;DP=714;FS=2.626;HRun=0;HaplotypeScore=263.7246;InbreedingCoeff=-0.6339;MQ=45.62;MQ0=2;MQRankSum=-7.349;QD=13.29;ReadPosRankSum=3.074;VQSLOD=3.9081;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:27:42.99:43,0,381	0/1:13,0:13:66.59:67,0,168	0/0:13,0:8:20.73:0,21,336	0/0:15,0:14:41.98:0,42,517	0/1:36,0:36:92.62:93,0,222	0/1:25,0:25:62.94:63,0,461	0/0:19,0:19:26.89:0,27,422	0/1:47,0:47:99:1197,0,336	0/1:25,0:25:99:188,0,165	0/1:31,0:31:99:458,0,363	0/1:23,0:23:99:234,0,175	0/1:27,0:27:99:224,0,363	0/1:38,0:38:99:354,0,339	0/1:33,0:33:57.47:57,0,330	1/1:21,6:27:81.04:1191,81,0	0/1:31,0:32:99:408,0,359	0/1:24,0:24:26.75:27,0,199	0/0:11,0:11:0.31:0,0,142	0/1:22,5:26:50.86:806,0,51	0/1:23,10:33:99:1283,0,249	0/1:16,0:16:82.85:375,0,83	0/1:22,0:22:46.53:47,0,144	0/1:29,0:29:99:293,0,153	0/1:20,0:20:34.01:34,0,309	0/1:28,0:28:99:290,0,309	0/1:34,0:34:99:289,0,790	0/1:24,9:33:99:618,0,128	0/0:6,0:6:14.92:0,15,115
chr10	32072748	.	A	ATGTATGTATGTATGT	20586.90	PASS	AB=0.884;AC=29;AF=0.518;AN=56;BaseQRankSum=-2.864;DP=712;FS=1.077;HRun=0;HaplotypeScore=343.5920;InbreedingCoeff=-0.6403;MQ=46.65;MQ0=2;MQRankSum=-10.342;QD=30.23;ReadPosRankSum=11.011;VQSLOD=1.5856;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:24,1:25:99:448,0,154	0/1:12,0:14:14.72:453,0,15	0/1:13,0:8:7.79:8,0,282	0/0:14,0:12:30.57:0,31,659	1/1:31,0:39:18.99:1161,19,0	0/1:22,0:25:44.70:894,0,45	0/1:19,0:19:84.30:333,0,84	0/1:50,0:50:16.70:17,0,1639	0/1:16,0:24:23.12:1238,0,23	0/1:23,10:33:56.46:2641,0,56	0/1:21,3:24:17.57:808,0,18	0/1:24,4:28:48.88:1050,0,49	0/1:26,8:34:2.42:1896,0,2	0/1:33,5:38:87.25:1083,0,87	0/1:17,0:28:99:666,0,301	0/1:31,2:33:30.25:1407,0,30	0/1:21,0:22:28.74:476,0,29	0/1:9,0:9:71.61:75,0,72	0/1:19,0:23:99:126,0,486	0/1:26,0:35:99:216,0,756	0/0:17,0:17:35.70:0,36,512	0/1:18,4:22:18.64:871,0,19	1/1:22,7:29:0.63:1817,1,0	0/1:16,0:16:64.55:139,0,65	0/1:27,3:30:4.45:1102,0,4	0/1:33,2:35:78.25:1237,0,78	0/1:19,0:28:99:228,0,114	1/1:3,0:3:3.01:199,3,0
chr10	32072754	.	T	TGTATGTATGTAT	23609.84	PASS	AB=1.000;AC=45;AF=0.804;AN=56;BaseQRankSum=2.511;DP=709;FS=6.106;HRun=0;HaplotypeScore=291.8906;InbreedingCoeff=0.1700;MQ=46.02;MQ0=2;MQRankSum=-5.523;QD=34.72;ReadPosRankSum=4.883;VQSLOD=3.3827;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:24:39.21:168,0,39	1/1:14,0:14:21.06:639,21,0	0/1:12,0:6:16.82:17,0,133	0/0:13,0:11:15.52:0,16,374	1/1:42,0:42:57.16:1606,57,0	1/1:25,0:25:45.15:1204,45,0	1/1:16,0:16:24.01:426,24,0	0/1:47,0:47:99:150,0,580	1/1:13,8:22:30.09:1584,30,0	1/1:34,0:34:81.26:2519,81,0	1/1:24,0:24:36.10:777,36,0	1/1:29,0:29:39.13:1008,39,0	1/1:33,0:33:51.17:1709,51,0	1/1:38,0:38:21.05:877,21,0	1/1:27,0:27:54.17:1558,54,0	1/1:33,0:33:60.16:1387,60,0	1/1:24,0:25:33.07:651,33,0	1/1:7,0:7:8.98:102,9,0	0/1:19,0:18:95.63:376,0,96	0/1:36,0:36:99:780,0,292	0/0:16,0:16:12.01:0,12,153	1/1:24,0:24:20.08:727,20,0	1/1:28,0:28:57.17:1643,57,0	0/1:17,0:17:23.71:167,0,24	1/1:33,0:33:48.16:1140,48,0	1/1:37,0:37:78.27:1699,78,0	0/1:28,0:28:99:539,0,139	1/1:6,0:6:3.01:157,3,0
chr10	32072761	.	A	ATGTATGTATGTATGTA	27895.46	PASS	AB=1.000;AC=46;AF=0.821;AN=56;BaseQRankSum=-1.957;DP=721;FS=5.235;HRun=0;HaplotypeScore=326.5446;InbreedingCoeff=0.2204;MQ=47.31;MQ0=2;MQRankSum=-5.390;QD=40.20;ReadPosRankSum=2.968;VQSLOD=3.3529;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:26:12.04:302,12,0	1/1:15,0:15:21.06:571,21,0	0/1:15,0:10:16.82:17,0,113	0/0:12,0:10:15.52:0,16,363	1/1:45,0:45:57.04:1465,57,0	1/1:23,0:23:48.16:1286,48,0	1/1:17,0:17:27.02:549,27,0	0/1:48,0:48:99:391,0,286	1/1:23,0:23:30.09:1277,30,0	1/1:32,0:32:81.26:3443,81,0	1/1:27,0:27:36.10:1121,36,0	1/1:33,0:33:39.13:1419,39,0	1/1:35,0:35:51.18:2433,51,0	1/1:14,20:36:21.05:1302,21,0	1/1:30,0:30:53.81:1010,54,0	1/1:33,0:33:60.16:1892,60,0	1/1:26,0:26:33.07:655,33,0	1/1:7,0:7:8.98:122,9,0	0/1:17,0:16:56.59:229,0,57	0/1:33,0:33:99:599,0,145	0/0:15,0:15:10.55:0,11,83	1/1:7,20:28:17.98:1063,18,0	1/1:29,0:29:57.17:2258,57,0	0/1:17,0:17:68.31:400,0,68	1/1:36,0:36:48.16:1529,48,0	1/1:35,0:35:81.28:2029,81,0	0/1:22,0:22:63.91:306,0,64	1/1:6,0:6:3.01:228,3,0
chr10	32073117	.	C	CAA	1418.05	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-5.659;DP=703;FS=0.000;HRun=4;HaplotypeScore=100.0212;InbreedingCoeff=0.9747;MQ=77.05;MQ0=0;MQRankSum=-1.463;QD=44.31;ReadPosRankSum=2.715;VQSLOD=2.4700;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:72.21:0,72,931	0/0:8,0:8:21.07:0,21,280	0/0:36,0:36:93.92:0,94,1148	0/0:27,0:25:58.34:0,58,744	0/0:36,0:36:96.30:0,96,1256	0/0:23,0:22:66.21:0,66,880	0/0:17,0:16:42.13:0,42,560	0/0:25,0:25:72.21:0,72,919	0/0:11,0:11:33.11:0,33,439	0/0:28,0:28:78.25:0,78,1038	0/0:29,0:29:78.25:0,78,1034	0/0:25,0:25:66.21:0,66,880	0/0:29,0:29:78.23:0,78,1008	0/0:27,0:27:75.24:0,75,998	1/1:1,31:32:84.29:1513,84,0	0/0:28,0:28:84.28:0,84,1120	0/0:31,0:31:90.27:0,90,1177	0/0:9,0:9:24.08:0,24,314	0/0:21,0:21:63.20:0,63,817	0/0:27,0:27:75.22:0,75,967	0/0:24,0:24:69.21:0,69,904	0/0:27,0:27:75.25:0,75,999	0/0:28,0:28:84.25:0,84,1096	0/0:21,0:21:57.17:0,57,742	0/0:30,0:30:87.21:0,87,1122	0/0:28,0:28:81.25:0,81,1053	0/0:45,0:45:99:0,129,1702	0/0:6,0:6:14.07:0,14,166
chr10	32073441	.	GTCAGTTTTTCAAATA	G	3947.76	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.073;DP=707;FS=1.497;HRun=0;HaplotypeScore=279.6066;InbreedingCoeff=0.9970;MQ=95.41;MQ0=0;MQRankSum=-9.154;QD=96.29;ReadPosRankSum=1.919;VQSLOD=3.4050;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:81.27:0,81,5490	0/0:8,0:8:21.07:0,21,1365	0/0:38,0:38:90.31:0,90,4691	0/0:28,0:28:72.25:0,72,4837	0/0:34,0:34:93.32:0,93,6564	1/1:3,21:24:57.20:2500,57,0	1/1:3,14:17:33.11:1448,33,0	0/0:27,0:27:63.21:0,63,4084	0/0:24,0:24:72.23:0,72,5117	0/0:30,0:29:84.28:0,84,5204	0/0:24,0:24:69.23:0,69,4467	0/0:31,0:31:90.29:0,90,6273	0/0:27,0:27:72.25:0,72,5020	0/0:25,0:25:75.25:0,75,5140	0/0:46,0:46:99:0,129,8717	0/0:29,0:29:81.28:0,81,5577	0/0:28,0:28:78.27:0,78,5571	0/0:12,0:12:27.09:0,27,1492	0/0:25,0:25:66.23:0,66,4495	0/0:23,0:23:57.16:0,57,3826	0/0:25,0:25:69.22:0,69,4220	0/0:25,0:25:75.26:0,75,5219	0/0:16,0:16:48.15:0,48,3248	0/0:18,0:18:45.15:0,45,3183	0/0:29,0:29:87.30:0,87,5805	0/0:29,0:29:84.29:0,84,5894	0/0:27,0:27:75.26:0,75,5252	0/0:10,0:10:30.10:0,30,2183
chr10	32075025	.	T	TC	12735.12	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-3.248;DP=378;FS=6.351;HRun=2;HaplotypeScore=77.9420;InbreedingCoeff=0.9625;MQ=70.72;MQ0=4;MQRankSum=-6.337;QD=39.43;ReadPosRankSum=2.715;VQSLOD=5.4027;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,10:10:27.02:401,27,0	1/1:0,9:9:27.04:402,27,0	0/0:23,0:12:23.02:0,23,449	0/0:31,0:20:50.30:0,50,697	1/1:0,21:21:47.89:652,48,0	1/1:0,13:13:32.99:469,33,0	1/1:0,11:11:30.10:479,30,0	1/1:0,27:27:78.16:1126,78,0	1/1:0,4:4:12.04:192,12,0	1/1:0,16:16:48.16:767,48,0	1/1:0,12:12:29.85:386,30,0	1/1:0,17:17:47.82:616,48,0	1/1:0,12:12:30.03:448,30,0	1/1:0,9:9:18.01:259,18,0	1/1:1,20:21:45.91:822,46,0	1/1:1,10:11:24.08:373,24,0	1/1:0,9:9:21.07:335,21,0	1/1:0,7:7:21.07:335,21,0	1/1:0,8:8:24.08:384,24,0	1/1:0,10:10:17.95:258,18,0	1/1:0,26:26:69.23:1081,69,0	1/1:0,11:11:29.79:357,30,0	1/1:0,12:12:33.03:495,33,0	1/1:0,7:7:21:294,21,0	1/1:0,9:9:26.96:371,27,0	1/1:0,13:13:39.13:622,39,0	1/1:0,9:9:24.08:380,24,0	1/1:0,9:9:27.09:431,27,0
chr10	32075045	.	ATGTGTGTGTGTG	A	1571.48	PASS	AB=0.860;AC=26;AF=0.481;AN=54;BaseQRankSum=0.335;DP=351;FS=7.311;HRun=0;HaplotypeScore=161.7904;InbreedingCoeff=0.4407;MQ=49.51;MQ0=16;MQRankSum=0.771;QD=10.20;ReadPosRankSum=3.361;VQSLOD=1.8375;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:9,1:11:10.19:74,10,0	0/0:7,0:9:1.88:0,2,44	./.	0/0:31,0:11:8.87:0,9,59	0/0:14,0:20:11.08:0,11,102	0/0:13,0:16:4.88:0,5,51	0/0:7,0:9:11.79:0,12,80	0/0:23,0:22:34.91:0,35,377	0/0:4,0:6:3:0,3,25	1/1:11,2:13:18.93:272,19,0	1/1:4,3:9:7.54:196,8,0	1/1:13,2:15:5.82:33,6,0	1/1:7,2:9:8.98:73,9,0	1/1:6,0:7:9:99,9,0	1/1:11,0:17:18.66:157,19,0	0/1:6,1:7:18.02:101,0,18	0/0:7,0:7:3.01:0,3,80	0/1:8,2:10:97.88:186,0,98	0/0:11,0:9:17.86:0,18,388	0/0:10,0:10:2.50:0,2,23	0/0:19,0:18:24:0,24,378	1/1:7,0:7:2.99:24,3,0	1/1:13,0:13:6.46:50,6,0	1/1:2,0:2:2.99:24,3,0	1/1:7,0:9:5.95:74,6,0	0/1:11,3:14:99:251,0,115	0/0:8,0:8:12.02:0,12,311	0/1:9,1:10:6.62:139,0,7
chr10	32075069	.	G	GTA	915.01	PASS	AB=0.988;AC=26;AF=0.481;AN=54;BaseQRankSum=2.929;DP=285;FS=10.467;HRun=0;HaplotypeScore=105.9443;InbreedingCoeff=0.2534;MQ=35.85;MQ0=22;MQRankSum=0.320;QD=6.02;ReadPosRankSum=-1.049;VQSLOD=2.4376;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,2:12:5.20:65,5,0	0/1:4,0:4:6.06:6,0,18	./.	0/0:17,0:3:8.87:0,9,59	0/0:14,0:14:3.89:0,4,25	0/0:15,0:13:2.99:0,3,23	0/0:6,0:6:11.79:0,12,80	0/0:26,0:22:61.53:0,62,414	0/0:4,0:4:2.81:0,3,20	0/1:11,0:11:14.06:119,0,14	0/1:9,0:9:20.62:50,0,21	0/1:8,1:9:4.45:12,0,4	1/1:7,1:8:8.98:73,9,0	1/1:7,1:8:8.98:73,9,0	0/1:13,0:13:4.90:83,0,5	1/1:5,1:6:8.77:94,9,0	0/0:8,0:7:2.80:0,3,13	0/1:9,0:9:78.55:90,0,79	0/0:10,0:8:19.05:0,19,122	0/1:10,0:10:6.24:6,0,18	0/0:13,0:9:20.95:0,21,169	1/1:5,0:4:2.99:24,3,0	1/1:8,0:8:6.46:50,6,0	1/1:4,0:4:2.99:24,3,0	1/1:11,1:12:5.99:49,6,0	0/1:13,0:13:2.97:169,0,3	0/0:8,0:8:4.65:0,5,30	1/1:9,0:8:14.39:94,14,0
chr10	32075081	.	GTA	G	216.82	PASS	AB=0.971;AC=24;AF=0.522;AN=46;BaseQRankSum=-0.333;DP=210;FS=0.880;HRun=0;HaplotypeScore=87.9491;InbreedingCoeff=-0.0701;MQ=40.22;MQ0=12;MQRankSum=0.178;QD=1.36;ReadPosRankSum=-0.224;VQSLOD=1.6307;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:10:3.69:13,4,0	1/1:3,1:4:1.96:22,2,0	0/1:6,0:2:0:0,0,0	./.	0/1:13,2:15:13.21:35,0,13	0/1:17,1:16:12.79:13,0,35	1/1:3,0:3:5.81:33,6,0	0/1:31,0:27:19.16:19,0,177	1/1:3,0:3:2.04:6,2,0	0/1:6,0:6:17.28:17,0,42	1/1:6,0:6:5.79:33,6,0	./.	./.	0/0:5,0:5:0.47:0,0,1	1/1:10,0:9:6.46:32,6,0	0/1:4,0:4:1.49:11,0,1	0/0:6,0:5:3.01:0,3,38	0/1:7,0:7:15.76:16,0,66	0/1:7,0:6:19.56:24,0,20	0/0:8,1:9:3.63:0,4,14	0/1:7,2:6:3.07:51,0,3	./.	./.	0/1:3,0:3:0:0,0,0	0/0:9,0:9:2.51:0,3,7	0/1:9,0:9:9.84:10,0,90	0/1:7,0:7:2.89:4,0,3	0/0:5,0:4:6.80:0,7,40
chr10	32075104	.	T	TATATATAA	5264.58	PASS	AB=0.867;AC=45;AF=0.938;AN=48;BaseQRankSum=-2.618;DP=207;FS=0.000;HRun=0;HaplotypeScore=85.1970;InbreedingCoeff=0.1001;MQ=60.49;MQ0=4;MQRankSum=-1.702;QD=25.93;ReadPosRankSum=1.336;VQSLOD=4.2081;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,0:7:3.43:20,3,0	./.	0/1:12,0:6:24.65:25,0,37	0/1:15,0:6:3.57:4,0,9	1/1:9,0:9:5.48:100,5,0	1/1:16,0:14:24.34:263,24,0	1/1:1,0:1:3.01:51,3,0	1/1:9,20:36:94.45:2444,94,0	1/1:3,0:3:6.45:49,6,0	1/1:10,0:10:17.98:246,18,0	1/1:7,0:7:11.05:158,11,0	./.	1/1:4,0:4:3:27,3,0	1/1:4,0:4:4.68:24,5,0	./.	1/1:7,0:7:13.24:124,13,0	1/1:8,0:8:8.94:80,9,0	1/1:6,0:6:9.43:67,9,0	1/1:5,0:5:12.03:170,12,0	1/1:1,2:3:5.98:127,6,0	1/1:3,1:4:11.99:210,12,0	./.	1/1:3,0:3:3:25,3,0	0/1:1,0:3:0:0,0,0	1/1:8,0:10:21.31:156,21,0	1/1:11,0:13:22.60:306,23,0	1/1:5,2:8:17.98:397,18,0	1/1:7,0:7:15:191,15,0
chr10	32075795	.	CT	C	11104.67	PASS	AB=0.721;AC=52;AF=0.929;AN=56;BaseQRankSum=-4.565;DP=542;FS=1.164;HRun=10;HaplotypeScore=57.9494;InbreedingCoeff=0.6046;MQ=70.32;MQ0=0;MQRankSum=-0.763;QD=21.07;ReadPosRankSum=3.585;VQSLOD=5.7457;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,7:11:20.99:182,21,0	1/1:1,8:9:20.98:182,21,0	0/0:14,1:13:17.85:0,18,156	0/1:6,1:7:1.79:2,0,82	1/1:0,22:22:59.97:521,60,0	1/1:5,17:22:41.98:365,42,0	1/1:4,12:16:32.99:286,33,0	1/1:7,23:30:68.97:599,69,0	1/1:4,14:18:38.99:339,39,0	1/1:4,23:28:71.02:605,71,0	1/1:2,28:30:77.97:676,78,0	1/1:2,12:14:35.99:313,36,0	1/1:1,14:15:38.99:339,39,0	1/1:3,14:17:41.99:365,42,0	1/1:2,24:26:68.98:599,69,0	1/1:3,22:25:56.98:495,57,0	0/1:4,13:17:12.25:247,0,12	1/1:2,11:13:32.99:286,33,0	1/1:2,16:18:47.99:417,48,0	1/1:2,35:38:99:883,104,0	1/1:1,7:8:20.99:182,21,0	1/1:5,16:21:44.98:391,45,0	1/1:1,22:23:59.88:521,60,0	1/1:1,12:13:35.99:313,36,0	1/1:2,16:18:47.99:417,48,0	1/1:0,17:17:50.96:436,51,0	1/1:4,30:34:83.98:729,84,0	1/1:1,16:17:47.98:417,48,0
chr10	32075920	.	A	AC	17078.04	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=-14.979;DP=582;FS=5.464;HRun=0;HaplotypeScore=61.5495;InbreedingCoeff=0.9793;MQ=82.59;MQ0=0;MQRankSum=-2.981;QD=40.09;ReadPosRankSum=6.525;VQSLOD=4.8258;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,13:13:30.10:467,30,0	1/1:1,9:10:24.08:382,24,0	0/0:21,0:21:41.57:0,42,576	0/0:17,0:17:7.23:0,7,330	1/1:0,38:38:99:1685,108,0	1/1:1,29:30:78.27:1240,78,0	1/1:0,9:9:24.08:382,24,0	0/0:32,0:32:90.28:0,90,1225	1/1:0,21:21:48.12:736,48,0	1/1:0,20:20:60.16:920,60,0	1/1:0,25:25:74.91:1056,75,0	1/1:0,18:18:48.16:764,48,0	1/1:0,19:19:48.16:758,48,0	1/1:0,13:13:36.12:572,36,0	1/1:0,23:23:54.18:859,54,0	1/1:0,23:23:57.19:907,57,0	1/1:0,12:12:30.10:472,30,0	1/1:1,12:13:18.04:284,18,0	0/0:22,0:22:66.15:0,66,813	0/0:32,0:32:96.26:0,96,1267	0/0:5,0:5:15.05:0,15,207	1/1:1,19:20:53.93:761,54,0	1/1:1,26:27:59.93:913,60,0	1/1:0,13:13:33.11:525,33,0	1/1:0,33:33:90.31:1432,90,0	1/1:0,29:29:84.22:1264,84,0	0/0:27,0:27:81.20:0,81,1044	1/1:0,17:17:45.15:701,45,0
chr10	32076573	.	GA	G	15567.51	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=13.905;DP=775;FS=1.775;HRun=6;HaplotypeScore=91.6310;InbreedingCoeff=0.9996;MQ=81.25;MQ0=0;MQRankSum=-2.226;QD=27.36;ReadPosRankSum=6.686;VQSLOD=4.4795;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,30:30:84.21:901,84,0	1/1:0,20:20:57.14:613,57,0	0/0:22,0:23:54.94:0,55,660	0/0:17,0:17:39.08:0,39,489	1/1:2,41:43:99:1192,111,0	1/1:2,23:25:66.17:709,66,0	1/1:3,15:18:39.09:419,39,0	0/0:38,0:38:99:0,111,1459	1/1:3,21:24:60.15:645,60,0	1/1:4,25:29:78.19:837,78,0	1/1:2,25:27:72.18:772,72,0	1/1:1,32:33:81.20:870,81,0	1/1:4,32:36:84.21:902,84,0	1/1:3,31:34:84.21:903,84,0	1/1:5,33:38:81.20:870,81,0	1/1:4,38:41:99:1161,108,0	1/1:1,17:18:45.11:484,45,0	1/1:1,11:12:24.02:245,24,0	0/0:29,0:29:81.24:0,81,1031	0/0:34,0:34:90.27:0,90,1158	0/0:26,0:26:75.24:0,75,986	1/1:2,19:21:57.14:613,57,0	1/1:2,26:28:69.17:741,69,0	1/1:0,21:21:63.16:677,63,0	1/1:2,26:28:75.19:806,75,0	1/1:2,26:28:78.16:821,78,0	0/0:39,0:39:99:0,105,1339	1/1:2,12:14:36.09:387,36,0
chr10	32077197	.	T	TAAAAAAA	6819.05	PASS	AB=1.000;AC=53;AF=0.946;AN=56;BaseQRankSum=-0.989;DP=508;FS=1.467;HRun=18;HaplotypeScore=133.7341;InbreedingCoeff=0.0426;MQ=66.01;MQ0=10;MQRankSum=-1.751;QD=13.42;ReadPosRankSum=-1.098;VQSLOD=0.6670;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:12,0:12:9.01:115,9,0	1/1:6,0:6:9.03:153,9,0	0/1:50,0:18:25.22:52,0,25	0/1:33,0:18:5.66:6,0,47	1/1:22,0:22:21.37:261,21,0	1/1:20,0:20:32.10:446,32,0	1/1:7,3:10:9.03:218,9,0	1/1:36,0:37:38.81:361,39,0	1/1:6,0:6:3.01:73,3,0	1/1:22,0:22:42.02:604,42,0	1/1:24,0:24:18.04:261,18,0	1/1:19,0:19:31.72:446,32,0	1/1:17,0:17:27.09:455,27,0	1/1:18,0:18:14.22:162,14,0	0/1:16,0:16:8.69:9,0,199	1/1:16,0:16:22.62:333,23,0	1/1:5,4:8:7.77:108,8,0	1/1:7,0:7:9.01:90,9,0	1/1:23,0:24:43.79:501,44,0	1/1:18,0:18:20.90:178,21,0	1/1:7,0:6:8.12:72,8,0	1/1:7,0:7:5.54:28,6,0	1/1:20,0:20:15.40:177,15,0	1/1:5,0:5:3.01:39,3,0	1/1:10,0:9:21.04:377,21,0	1/1:27,0:26:42.14:664,42,0	1/1:25,0:26:45.61:495,46,0	1/1:15,0:17:10.78:135,11,0
chr10	32077367	.	C	CT	10957.80	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=5.342;DP=519;FS=0.827;HRun=8;HaplotypeScore=64.0344;InbreedingCoeff=0.9955;MQ=69.36;MQ0=0;MQRankSum=-3.098;QD=28.54;ReadPosRankSum=4.793;VQSLOD=4.8350;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,14:15:36.11:415,36,0	1/1:0,8:8:17.71:207,18,0	0/0:7,0:7:17.90:0,18,150	0/0:13,0:13:35.95:0,36,314	1/1:3,23:26:69.09:753,69,0	1/1:5,23:28:63.19:725,63,0	1/1:1,14:15:39.11:448,39,0	0/0:36,0:36:96.05:0,96,878	1/1:0,14:14:33.10:381,33,0	1/1:4,24:28:69.20:796,69,0	1/1:0,15:15:42.12:485,42,0	1/1:3,19:22:48.14:554,48,0	1/1:6,24:30:39.07:700,39,0	1/1:1,20:21:54.16:623,54,0	1/1:2,17:19:48.14:554,48,0	1/1:3,19:22:51.15:589,51,0	1/1:2,20:22:60.18:692,60,0	1/1:1,7:7:21.06:242,21,0	0/0:16,0:16:33.01:0,33,302	0/0:16,0:16:42.02:0,42,384	0/0:18,0:18:45.02:0,45,412	1/1:3,7:10:24.03:259,24,0	1/1:0,14:14:36.11:415,36,0	1/1:1,15:16:45.13:519,45,0	1/1:0,14:14:39.12:450,39,0	1/1:2,22:24:63.17:716,63,0	0/0:29,0:29:75.02:0,75,680	1/1:1,12:13:39.06:434,39,0
chr10	32078460	.	A	AT	2754.83	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-10.979;DP=588;FS=2.607;HRun=7;HaplotypeScore=57.7621;InbreedingCoeff=0.9548;MQ=77.80;MQ0=0;MQRankSum=-0.553;QD=29.00;ReadPosRankSum=3.744;VQSLOD=4.3033;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:54.02:0,54,505	1/1:3,8:11:27.08:321,27,0	0/0:20,0:20:32.35:0,32,432	0/0:11,0:11:22.38:0,22,202	1/1:2,29:31:84.22:998,84,0	1/1:1,24:25:69.21:834,69,0	1/1:0,9:10:20.93:232,21,0	0/0:37,0:37:93.13:0,93,895	1/1:0,18:18:45.14:543,45,0	0/0:24,0:24:60.08:0,60,573	0/0:23,0:23:63.10:0,63,608	0/0:13,0:13:33.05:0,33,319	0/0:27,0:27:66.10:0,66,637	0/0:34,0:34:99:0,99,956	0/0:31,0:31:84.12:0,84,806	0/0:24,0:24:69.08:0,69,659	0/0:11,0:11:30.04:0,30,290	0/0:1,0:1:3:0,3,29	0/0:26,0:26:75.12:0,75,724	0/0:22,0:22:57.05:0,57,540	0/0:13,0:13:36.04:0,36,341	0/0:19,0:19:54.05:0,54,510	0/0:25,0:25:66.03:0,66,622	0/0:6,0:6:15.02:0,15,145	0/0:21,0:21:60.06:0,60,568	0/0:34,0:34:99:0,99,956	0/0:33,0:33:87.13:0,87,840	0/0:20,0:20:56.91:0,57,514
chr10	32079421	.	C	CT	6798.50	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=-13.420;DP=564;FS=3.751;HRun=10;HaplotypeScore=63.8510;InbreedingCoeff=0.9521;MQ=74.20;MQ0=1;MQRankSum=-1.594;QD=20.60;ReadPosRankSum=2.712;VQSLOD=5.9608;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,16:21:20.47:423,20,0	0/0:8,0:9:20.01:0,20,154	0/0:24,0:20:21.68:0,22,191	0/0:11,0:7:11.69:0,12,96	0/0:19,0:19:53.86:0,54,436	0/0:20,0:21:61.97:0,62,499	0/0:16,0:16:38.95:0,39,320	0/0:9,0:39:57.94:0,58,166	0/0:17,0:17:38.94:0,39,320	1/1:5,19:24:60.15:635,60,0	1/1:7,14:22:44.98:459,45,0	1/1:4,18:24:26.33:468,26,0	1/1:2,11:13:18.05:192,18,0	1/1:3,16:19:33.08:352,33,0	1/1:5,13:19:38.93:398,39,0	1/1:2,11:14:35.92:366,36,0	1/1:4,14:18:11.45:327,11,0	1/1:6,15:22:17.25:358,17,0	0/0:1,0:22:39.13:0,39,112	0/0:3,0:27:33.23:0,33,102	0/0:2,0:7:8.15:0,8,24	1/1:5,16:21:20.47:422,20,0	1/1:7,12:20:38.93:398,39,0	1/1:1,11:13:35.92:366,36,0	1/1:1,23:24:60.15:640,60,0	1/1:10,20:31:56.56:608,57,0	0/0:1,0:21:35.26:0,35,103	1/1:6,18:25:3.22:385,3,0
chr10	32081713	.	CA	C	18462.92	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=9.501;DP=760;FS=2.998;HRun=3;HaplotypeScore=79.4555;InbreedingCoeff=0.9948;MQ=86.32;MQ0=0;MQRankSum=-5.133;QD=33.88;ReadPosRankSum=6.410;VQSLOD=4.9273;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,44:44:99:1488,120,0	1/1:0,13:13:36.11:446,36,0	0/0:19,0:19:50.93:0,51,632	0/0:29,0:29:69.64:0,70,898	1/1:1,38:39:99:1376,111,0	1/1:0,28:28:78.25:967,78,0	1/1:3,17:20:51.16:632,51,0	0/0:24,0:24:66.19:0,66,889	1/1:1,21:22:57.18:706,57,0	1/1:0,31:31:90.24:1078,90,0	1/1:0,25:25:69.22:855,69,0	1/1:0,29:29:78.25:967,78,0	1/1:0,24:24:72.23:891,72,0	1/1:1,27:28:75.24:930,75,0	0/0:37,0:37:99:0,111,1549	1/1:1,24:25:69.22:855,69,0	1/1:0,37:37:99:1339,108,0	1/1:0,21:21:54.17:669,54,0	0/0:24,0:24:66.21:0,66,918	0/0:33,0:33:93.30:0,93,1322	0/0:27,0:27:75.25:0,75,1080	1/1:1,34:35:93.29:1153,93,0	1/1:4,32:36:84.05:1039,84,0	1/1:0,32:32:93.29:1153,93,0	1/1:0,25:25:63.20:781,63,0	1/1:0,27:27:81.23:990,81,0	0/0:22,0:22:63.20:0,63,891	1/1:0,4:4:12.04:149,12,0
chr10	32082226	.	AT	A	9810.25	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=8.250;DP=592;FS=8.812;HRun=9;HaplotypeScore=76.8624;InbreedingCoeff=0.9963;MQ=80.19;MQ0=1;MQRankSum=-2.614;QD=23.30;ReadPosRankSum=3.344;VQSLOD=5.5276;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,20:21:51.03:467,51,0	1/1:1,12:13:30.01:275,30,0	0/0:22,0:21:42.38:0,42,398	0/0:12,0:12:14.68:0,15,125	1/1:2,27:29:77.90:693,78,0	1/1:1,25:26:75.04:686,75,0	1/1:3,15:18:36.01:330,36,0	0/0:37,0:37:93.23:0,93,1033	1/1:0,15:15:38.83:357,39,0	1/1:1,18:19:54.02:490,54,0	1/1:3,21:24:63.02:577,63,0	1/1:2,12:14:30.01:275,30,0	1/1:2,22:24:54.03:494,54,0	1/1:1,18:19:51.02:467,51,0	1/1:0,23:23:63.03:577,63,0	1/1:1,18:19:48.03:439,48,0	1/1:1,24:25:69.04:631,69,0	1/1:1,13:14:33.02:302,33,0	0/0:34,0:34:87.26:0,87,1004	0/0:23,0:23:63.19:0,63,727	0/0:18,0:18:44.92:0,45,469	1/1:2,10:12:30.01:275,30,0	1/1:3,23:26:62.77:576,63,0	1/1:1,11:12:27.01:247,27,0	1/1:1,20:21:60.03:549,60,0	1/1:1,19:21:56.06:500,56,0	0/0:24,0:24:69.20:0,69,796	1/1:4,22:26:66.02:604,66,0
chr10	32082653	.	GCGGTTTTTAAT	G	10002.32	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=14.741;DP=667;FS=1.827;HRun=0;HaplotypeScore=218.1271;InbreedingCoeff=0.9992;MQ=79.36;MQ0=0;MQRankSum=-14.938;QD=94.36;ReadPosRankSum=0.102;VQSLOD=4.9286;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,102,5539	1/1:0,13:13:36.12:1333,36,0	0/0:20,0:20:57.11:0,57,1595	0/0:16,0:15:23.56:0,24,1418	1/1:0,33:33:75.26:2627,75,0	1/1:0,22:22:57.20:2007,57,0	1/1:0,14:14:39.13:1378,39,0	0/0:35,0:35:99:0,105,5099	1/1:0,24:24:72.25:2657,72,0	0/0:31,0:31:93.31:0,93,5167	0/0:27,0:27:78.27:0,78,4482	0/0:23,0:23:69.24:0,69,4066	0/0:31,0:31:90.31:0,90,5054	0/0:30,0:30:87.26:0,87,4676	0/0:40,0:40:99:0,117,6440	0/0:38,0:38:99:0,114,6120	0/0:23,0:23:69.24:0,69,4017	0/0:19,0:19:57.17:0,57,3222	0/0:14,0:14:42.14:0,42,2477	0/0:25,0:25:75.23:0,75,3870	0/0:20,0:20:60.19:0,60,3372	0/0:15,0:15:42.14:0,42,2262	0/0:15,0:15:45.15:0,45,2460	0/0:19,0:19:57.20:0,57,3087	0/0:24,0:24:72.25:0,72,4017	0/0:19,0:19:57.20:0,57,3118	0/0:33,0:31:99:0,99,5691	0/0:10,0:10:27.09:0,27,1601
chr10	32085020	.	T	TCACACACACAC	2559.31	PASS	AB=0.762;AC=22;AF=0.393;AN=56;BaseQRankSum=7.318;DP=370;FS=2.697;HRun=0;HaplotypeScore=127.2291;InbreedingCoeff=-0.3049;MQ=57.16;MQ0=11;MQRankSum=-6.458;QD=11.37;ReadPosRankSum=0.684;VQSLOD=2.6519;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:14,0:22:52.42:52,0,148	0/1:3,0:5:72.57:118,0,73	0/0:29,0:18:27.56:0,28,630	0/0:32,0:17:50.17:0,50,628	0/1:9,0:9:45.65:46,0,72	0/1:10,0:17:79.54:487,0,80	0/0:6,0:6:5.61:0,6,81	0/0:22,0:21:60.14:0,60,770	0/1:3,2:9:31.81:244,0,32	0/1:11,0:14:99:268,0,208	0/1:10,0:10:40.85:41,0,72	0/1:5,0:9:25.93:134,0,26	0/0:9,0:9:10.53:0,11,127	0/1:4,0:9:44.61:58,0,45	0/1:9,0:9:28.30:28,0,32	0/1:6,0:11:22.90:266,0,23	0/1:14,0:20:99:164,0,200	0/1:13,0:21:50.87:51,0,364	0/0:14,0:14:38.98:0,39,489	0/0:3,0:8:8.61:0,9,78	0/0:5,0:13:14.63:0,15,159	1/1:6,0:9:6:134,6,0	1/1:6,0:7:3.01:67,3,0	0/1:7,0:15:25.94:253,0,26	1/1:4,0:4:2.99:75,3,0	0/1:11,0:14:99:220,0,329	0/0:2,0:12:16.77:0,17,76	0/1:4,0:7:18.28:18,0,73
chr10	32087208	.	A	AT	3600.05	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=14.823;DP=594;FS=5.071;HRun=6;HaplotypeScore=75.3356;InbreedingCoeff=0.9955;MQ=71.11;MQ0=0;MQRankSum=-4.054;QD=31.86;ReadPosRankSum=-2.349;VQSLOD=3.1821;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:72.12:0,72,719	0/0:10,0:10:27.06:0,27,275	0/0:11,0:11:21.02:0,21,206	0/0:11,0:10:20.62:0,21,203	0/0:34,0:34:90.17:0,90,905	0/0:26,0:26:69.13:0,69,691	0/0:15,0:15:45.05:0,45,433	1/1:1,34:34:99:1207,102,0	0/0:18,0:18:51.09:0,51,508	0/0:34,0:34:87.19:0,87,884	0/0:27,0:27:78.14:0,78,780	0/0:13,0:13:33.07:0,33,336	0/0:25,0:25:63.11:0,63,630	0/0:29,0:29:84.14:0,84,837	0/0:22,0:22:60.11:0,60,603	0/0:23,0:23:63.14:0,63,642	0/0:23,0:23:60.13:0,60,611	0/0:19,0:19:57.07:0,57,559	1/1:1,15:16:42.11:512,42,0	1/1:2,20:22:60.19:750,60,0	1/1:2,11:13:27.09:340,27,0	0/0:20,0:20:51.11:0,51,520	0/0:19,0:19:54.10:0,54,538	0/0:11,0:11:30.07:0,30,306	0/0:22,0:22:63.14:0,63,644	0/0:31,0:31:81.16:0,81,816	1/1:4,23:27:63.20:792,63,0	0/0:10,0:10:18.04:0,18,184
chr10	32087517	.	GA	G	3712.08	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=10.635;DP=675;FS=8.651;HRun=8;HaplotypeScore=66.0103;InbreedingCoeff=0.9977;MQ=78.65;MQ0=0;MQRankSum=0.875;QD=24.91;ReadPosRankSum=-0.160;VQSLOD=4.0499;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:69.20:0,69,818	0/0:7,0:7:18.06:0,18,217	0/0:19,0:19:39.07:0,39,440	0/0:15,0:15:39.11:0,39,452	0/0:27,0:27:81.19:0,81,940	0/0:30,0:30:87.24:0,87,1028	0/0:16,0:16:45.13:0,45,532	1/1:7,35:42:88.93:994,89,0	0/0:24,0:24:66.17:0,66,764	0/0:24,0:24:47.88:0,48,553	0/0:27,0:27:69.13:0,69,794	0/0:25,1:26:31.21:0,31,659	0/0:36,0:36:99:0,99,1186	0/0:30,0:30:90.26:0,90,1072	0/0:23,0:23:63.18:0,63,751	0/0:39,0:39:99:0,108,1293	0/0:33,0:33:93.27:0,93,1109	0/0:11,0:11:27.03:0,27,297	1/1:2,25:27:75.11:720,75,0	1/1:2,33:35:93.14:897,93,0	1/1:1,12:13:33.05:319,33,0	0/0:18,0:18:48.11:0,48,564	0/0:22,0:23:66:0,66,754	0/0:14,0:14:42.13:0,42,507	0/0:25,0:25:75.23:0,75,906	0/0:22,0:22:60.17:0,60,715	1/1:4,28:32:81.13:782,81,0	0/0:13,0:13:39.05:0,39,430
chr10	32088321	.	A	AT	4739.39	PASS	AB=0.609;AC=34;AF=0.607;AN=56;BaseQRankSum=-12.100;DP=504;FS=1.387;HRun=13;HaplotypeScore=66.5202;InbreedingCoeff=0.5579;MQ=69.60;MQ0=1;MQRankSum=-1.120;QD=13.78;ReadPosRankSum=2.660;VQSLOD=5.5426;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:8,12:20:8.85:237,0,9	0/0:7,0:7:11.88:0,12,82	0/0:11,0:10:11.31:0,11,56	0/0:6,0:6:2.95:0,3,21	1/1:11,17:29:1.10:263,1,0	1/1:8,7:16:3.28:161,3,0	1/1:6,8:15:2.94:145,3,0	0/0:8,0:32:46.96:0,47,136	1/1:1,12:13:29.97:263,30,0	1/1:7,17:24:47.70:409,48,0	1/1:7,18:25:21.36:321,21,0	0/1:6,8:15:9.68:177,0,10	1/1:5,16:22:15.20:272,15,0	1/1:9,10:20:50.71:422,51,0	0/0:14,3:18:9.79:0,10,199	1/1:4,13:18:26.51:237,27,0	1/1:4,10:14:9.45:230,9,0	1/1:4,6:11:17.86:154,18,0	0/0:7,0:18:22.36:0,22,64	0/0:5,0:21:24.37:0,24,70	0/0:2,0:13:18.78:0,19,53	0/1:7,12:19:22.75:231,0,23	1/1:5,16:21:39.31:354,39,0	1/1:3,8:11:21.02:195,21,0	0/1:4,12:16:28.71:190,0,29	1/1:5,11:16:27.02:246,27,0	0/0:7,0:32:46.65:0,47,159	1/1:4,14:19:2.64:234,3,0
chr10	32089605	.	TA	T	1420.02	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=8.483;DP=384;FS=5.600;HRun=2;HaplotypeScore=42.9530;InbreedingCoeff=0.9093;MQ=60.34;MQ0=3;MQRankSum=-3.707;QD=30.21;ReadPosRankSum=1.239;VQSLOD=2.9040;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,126,1980	0/0:2,0:2:6.02:0,6,96	0/0:24,0:20:57.19:0,57,889	0/0:27,0:26:75.22:0,75,1140	0/0:11,0:11:33.11:0,33,525	0/0:13,0:13:39.13:0,39,617	0/0:15,0:14:42.13:0,42,637	1/1:1,9:7:18.06:248,18,0	0/0:12,0:12:36.11:0,36,550	0/0:12,0:12:36.12:0,36,576	0/0:7,0:7:21.05:0,21,311	0/0:15,0:15:45.15:0,45,715	0/0:12,0:12:33.11:0,33,522	0/0:7,0:7:21.07:0,21,321	0/0:19,0:19:57.18:0,57,869	0/0:14,0:14:42.14:0,42,665	0/0:24,2:25:40.75:0,41,1105	0/0:21,0:21:63.21:0,63,1004	1/1:0,9:8:24.08:336,24,0	1/1:0,2:1:3.01:37,3,0	1/1:0,17:17:45.15:629,45,0	0/0:5,0:5:15.05:0,15,240	0/0:6,0:6:18.06:0,18,288	0/0:27,0:27:78.27:0,78,1242	0/0:6,0:6:18.04:0,18,263	0/0:11,0:11:33.11:0,33,526	1/1:0,9:9:24.08:335,24,0	0/0:3,0:3:9.03:0,9,141
chr10	32095206	.	CA	C	11331.75	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=16.707;DP=702;FS=3.176;HRun=3;HaplotypeScore=65.5856;InbreedingCoeff=0.9998;MQ=83.77;MQ0=0;MQRankSum=-3.221;QD=33.13;ReadPosRankSum=3.349;VQSLOD=5.4362;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,21:22:57.18:707,57,0	0/0:15,0:15:45.15:0,45,648	0/0:26,0:26:72.15:0,72,994	0/0:16,0:16:39.05:0,39,491	0/0:43,0:43:99:0,123,1747	0/0:33,0:33:96.31:0,96,1364	0/0:13,0:13:36.12:0,36,519	0/0:36,0:36:99:0,102,1451	0/0:24,0:24:72.22:0,72,1016	1/1:0,21:21:63.20:780,63,0	1/1:2,26:28:63.20:781,63,0	1/1:0,19:19:54.17:670,54,0	1/1:0,36:36:96.30:1190,96,0	1/1:2,16:18:42.13:521,42,0	0/0:27,0:27:81.23:0,81,1128	1/1:1,26:27:66.21:818,66,0	1/1:0,24:24:69.20:841,69,0	1/1:0,18:18:54.17:668,54,0	0/0:24,0:24:66.19:0,66,914	0/0:37,0:37:99:0,111,1580	0/0:23,0:23:69.23:0,69,994	1/1:0,22:22:63.20:776,63,0	1/1:2,31:33:93.28:1140,93,0	1/1:1,13:14:30.09:372,30,0	1/1:1,22:23:60.19:744,60,0	1/1:0,26:26:78.23:954,78,0	0/0:43,0:43:99:0,129,1835	1/1:0,11:11:30.09:372,30,0
chr10	32095769	.	T	TG	5624.61	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=15.249;DP=552;FS=1.529;HRun=0;HaplotypeScore=102.2935;InbreedingCoeff=0.9576;MQ=75.01;MQ0=0;MQRankSum=-1.880;QD=20.09;ReadPosRankSum=4.490;VQSLOD=6.5729;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,18:25:31.36:471,31,0	0/0:7,0:7:21.07:0,21,293	0/0:16,0:17:41.56:0,42,424	0/0:15,0:14:25.78:0,26,242	0/0:32,0:32:90.25:0,90,1196	0/0:18,0:18:54.17:0,54,737	0/0:24,0:24:72.14:0,72,895	0/0:25,0:25:75.21:0,75,983	0/0:15,0:15:45.13:0,45,597	1/1:4,12:16:32.64:340,33,0	1/1:0,13:13:29.96:293,30,0	1/1:2,20:22:44.05:510,44,0	1/1:3,23:26:47.70:550,48,0	1/1:5,8:13:7.48:177,7,0	0/0:28,0:28:84.25:0,84,1125	1/1:3,13:16:29.94:350,30,0	1/1:6,16:22:37.17:391,37,0	1/1:4,15:19:24.80:404,25,0	0/0:18,0:18:51.14:0,51,658	0/0:28,0:28:78.24:0,78,1043	0/0:11,0:11:33.11:0,33,460	1/1:3,13:16:12.81:215,13,0	1/1:8,12:20:31.69:404,32,0	1/1:3,13:16:8.95:336,9,0	1/1:2,26:28:74.20:725,74,0	1/1:10,13:23:12.01:394,12,0	0/0:34,0:33:99:0,99,1293	1/1:0,5:5:6.02:66,6,0
chr10	32095770	.	T	TGG	5908.22	PASS	AB=1.000;AC=31;AF=0.554;AN=56;BaseQRankSum=15.538;DP=553;FS=0.000;HRun=8;HaplotypeScore=113.8886;InbreedingCoeff=0.9069;MQ=74.20;MQ0=0;MQRankSum=-2.854;QD=19.69;ReadPosRankSum=1.039;VQSLOD=3.1223;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:25:48.06:504,48,0	0/0:7,0:7:21.04:0,21,225	0/0:15,0:15:29.79:0,30,293	0/1:15,0:14:5.84:6,0,216	0/0:32,0:32:85.74:0,86,927	0/0:18,0:18:45.11:0,45,502	0/0:25,0:25:54.10:0,54,598	0/0:23,0:23:57.09:0,57,613	0/0:15,0:15:36.09:0,36,401	1/1:17,0:17:36.88:369,37,0	1/1:13,0:13:30.04:307,30,0	1/1:23,1:24:54:533,54,0	1/1:24,0:24:51.54:509,52,0	1/1:13,1:14:6.15:205,6,0	0/0:27,0:27:72.19:0,72,802	1/1:17,0:17:35.81:343,36,0	1/1:20,3:23:39.09:426,39,0	1/1:18,1:19:23.62:378,24,0	0/0:18,0:18:45.10:0,45,493	0/0:27,0:27:66.12:0,66,714	0/0:12,0:12:27.05:0,27,301	1/1:16,0:16:24.02:229,24,0	1/1:23,0:23:33.60:492,34,0	1/1:15,0:15:19.85:322,20,0	1/1:28,0:29:77.91:815,78,0	1/1:22,0:22:11.06:416,11,0	0/0:34,0:33:96.15:0,96,1033	1/1:4,0:4:6:52,6,0
chr10	32096268	.	A	ACC	7632.07	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=6.353;DP=587;FS=0.744;HRun=7;HaplotypeScore=110.8711;InbreedingCoeff=0.9726;MQ=80.65;MQ0=0;MQRankSum=-2.123;QD=28.80;ReadPosRankSum=4.938;VQSLOD=4.2319;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,11:13:26.83:406,27,0	0/0:8,0:8:21:0,21,202	0/0:21,0:22:47.82:0,48,497	0/0:14,0:14:30.03:0,30,306	0/0:21,0:21:60.13:0,60,661	0/0:37,0:37:93.23:0,93,1062	0/0:24,0:24:57.11:0,57,638	0/0:35,0:35:86.92:0,87,928	0/0:26,0:26:75.21:0,75,862	1/1:7,10:18:35.55:475,36,0	1/1:3,16:19:39.09:608,39,0	1/1:4,22:26:48.16:772,48,0	1/1:1,24:25:42:689,42,0	1/1:3,16:20:36.12:584,36,0	0/0:37,0:37:98.79:0,99,1069	1/1:2,25:28:44.64:698,45,0	1/1:3,14:18:27.09:443,27,0	1/1:3,14:18:41.62:628,42,0	0/0:21,0:21:35.92:0,36,380	0/0:36,0:36:84.13:0,84,939	0/0:8,0:8:20.98:0,21,206	1/1:1,10:11:21.07:345,21,0	1/1:1,12:15:17.44:255,17,0	1/1:1,13:14:33.11:542,33,0	1/1:3,16:19:33.11:540,33,0	1/1:3,10:17:44.08:597,44,0	0/0:33,0:33:81.11:0,81,905	1/1:2,2:4:3.01:49,3,0
chr10	32097030	.	A	ACAATACAAATTT	24499.09	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=6.215;DP=488;FS=3.190;HRun=0;HaplotypeScore=215.4974;InbreedingCoeff=0.9689;MQ=77.52;MQ0=1;MQRankSum=-12.713;QD=97.61;ReadPosRankSum=0.889;VQSLOD=4.9785;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,6:12:24.04:1118,24,0	0/0:8,0:8:9.03:0,9,321	0/0:22,0:21:37.93:0,38,1112	0/0:22,0:20:21.45:0,21,453	0/0:25,0:25:60.21:0,60,2075	0/0:12,0:12:30.09:0,30,890	0/0:17,0:17:48.16:0,48,1619	0/0:25,0:25:54.13:0,54,1681	0/0:18,0:18:42.14:0,42,1495	1/1:24,7:32:54.11:2649,54,0	1/1:12,10:22:45.15:2277,45,0	1/1:11,4:16:33.10:1351,33,0	1/1:7,6:13:33.11:1962,33,0	1/1:12,9:21:42.10:2239,42,0	0/0:20,0:20:51.17:0,51,1523	1/1:10,7:17:30.10:1684,30,0	1/1:7,0:7:12.01:423,12,0	1/1:4,1:5:9.03:536,9,0	0/0:20,0:20:36.01:0,36,833	0/0:23,0:23:48.14:0,48,1535	0/0:6,0:6:18.06:0,18,642	1/1:15,11:26:48.16:2725,48,0	1/1:14,5:19:25.33:1298,25,0	1/1:2,4:6:12.04:643,12,0	1/1:11,8:19:27.98:1500,28,0	1/1:21,11:32:72.19:3379,72,0	0/0:19,0:19:39.13:0,39,1149	1/1:1,3:4:12.04:715,12,0
chr10	32097058	.	TC	T	1568.22	PASS	AB=0.628;AC=23;AF=0.411;AN=56;BaseQRankSum=13.441;DP=436;FS=0.414;HRun=1;HaplotypeScore=169.7430;InbreedingCoeff=0.4059;MQ=53.63;MQ0=13;MQRankSum=-12.309;QD=7.88;ReadPosRankSum=7.768;VQSLOD=0.6061;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,6:12:11.11:79,11,0	0/0:5,0:5:15.05:0,15,230	0/0:21,0:9:21.10:0,21,316	0/0:28,0:18:5.99:0,6,287	0/0:25,0:25:75.24:0,75,1146	0/0:13,0:13:33.10:0,33,485	0/0:20,0:20:57.19:0,57,842	0/0:26,0:23:66.22:0,66,950	0/0:15,0:15:45.13:0,45,646	0/1:7,18:25:38.38:228,0,38	1/1:4,12:16:7.17:127,7,0	0/1:6,10:16:19.48:108,0,19	1/1:6,9:15:6.38:150,6,0	1/1:5,13:17:42.85:225,43,0	0/0:17,0:17:50.93:0,51,724	1/1:1,12:13:37.26:195,37,0	0/1:3,3:6:28.70:29,0,53	0/1:3,1:4:11.55:12,0,42	0/0:18,0:17:45.09:0,45,592	0/0:21,0:18:18.05:0,18,228	0/0:6,0:6:15.03:0,15,176	0/1:7,11:18:31.32:110,0,31	1/1:5,6:11:3.77:85,4,0	0/1:1,3:4:3.95:8,0,4	1/1:1,7:8:3.85:83,4,0	0/1:4,24:28:20.95:272,0,21	0/0:22,0:21:45.13:0,45,624	1/1:2,3:3:8.71:47,9,0
chr10	32097060	.	TCTCTC	T	5639.89	PASS	AB=0.662;AC=25;AF=0.446;AN=56;BaseQRankSum=13.339;DP=437;FS=0.414;HRun=0;HaplotypeScore=183.3062;InbreedingCoeff=0.5320;MQ=50.75;MQ0=13;MQRankSum=-11.962;QD=27.92;ReadPosRankSum=8.639;VQSLOD=4.0882;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,6:12:22.87:290,23,0	0/0:5,0:5:15.05:0,15,438	0/0:21,0:9:27:0,27,549	0/0:26,0:16:22.55:0,23,511	0/0:25,0:25:75.26:0,75,2235	0/0:13,0:13:33.11:0,33,956	0/0:21,0:20:57.16:0,57,1432	0/0:27,0:24:69.21:0,69,1594	0/0:15,0:15:45.13:0,45,1138	0/1:8,18:26:23.91:730,0,24	1/1:5,12:17:22.95:505,23,0	0/1:7,10:17:40.86:381,0,41	1/1:6,9:15:19.52:472,20,0	1/1:5,13:17:39.13:539,39,0	0/0:17,0:17:51.17:0,51,1453	1/1:1,12:13:36.12:507,36,0	0/1:3,3:6:99:111,0,104	0/1:3,1:4:39.32:39,0,80	0/0:17,0:16:39.12:0,39,807	0/0:21,0:18:18.06:0,18,329	0/0:4,0:4:9.03:0,9,154	0/1:7,11:18:21.26:411,0,21	1/1:5,6:11:1.99:248,2,0	1/1:1,3:4:5.93:58,6,0	1/1:1,7:8:2.16:275,2,0	1/1:4,24:28:7.26:942,7,0	0/0:23,0:22:48.16:0,48,1192	1/1:2,3:3:9.03:130,9,0
chr10	32097075	.	T	TCTCTCTCTCTCTCTCTC	1261.92	PASS	AB=1.000;AC=6;AF=0.111;AN=54;BaseQRankSum=-2.462;DP=381;FS=3.200;HRun=0;HaplotypeScore=265.6697;InbreedingCoeff=0.5232;MQ=44.40;MQ0=17;MQRankSum=-2.808;QD=21.76;ReadPosRankSum=-4.951;VQSLOD=1.7532;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:10:8.70:0,9,445	0/0:7,0:7:18.04:0,18,580	0/0:16,0:6:17.99:0,18,352	0/0:17,0:8:14.24:0,14,298	0/0:25,0:25:72.16:0,72,2709	0/0:13,0:13:30.09:0,30,1218	0/0:15,0:14:39.09:0,39,1653	0/1:22,0:20:75.29:176,0,75	0/0:12,0:12:36.06:0,36,1266	0/0:24,0:23:62.37:0,62,2042	0/0:20,0:20:51.44:0,51,1241	0/0:16,0:16:30.20:0,30,1134	0/0:15,0:15:29.67:0,30,1035	0/0:18,0:17:41.63:0,42,1142	0/0:20,0:20:54.10:0,54,1984	0/0:12,0:12:27.58:0,28,1123	0/0:8,0:5:12.04:0,12,403	0/0:1,0:1:3.01:0,3,62	0/1:9,0:9:17.61:106,0,18	1/1:14,1:11:20.67:343,21,0	./.	0/0:15,0:15:33.36:0,33,1111	0/0:9,0:9:26.96:0,27,738	0/0:7,0:6:5.98:0,6,104	0/0:8,0:8:24.04:0,24,751	0/0:27,0:27:81.19:0,81,2853	1/1:9,3:11:20.15:770,20,0	0/0:6,0:4:12.01:0,12,357
chr10	32097125	.	C	CGAAA	10400.70	PASS	AB=0.697;AC=28;AF=0.538;AN=52;BaseQRankSum=11.542;DP=344;FS=3.752;HRun=0;HaplotypeScore=98.6404;InbreedingCoeff=0.7822;MQ=34.61;MQ0=33;MQRankSum=-7.550;QD=59.43;ReadPosRankSum=-1.508;VQSLOD=6.2645;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:6,10:12:22.29:699,0,22	0/0:8,0:8:15.05:0,15,299	./.	./.	0/0:28,0:25:39.13:0,39,817	0/0:13,0:12:24.08:0,24,491	0/0:16,0:14:36.04:0,36,668	0/0:15,0:14:42.14:0,42,877	0/0:12,0:12:17.80:0,18,377	1/1:2,8:9:27.09:779,27,0	1/1:2,18:18:45.15:1267,45,0	1/1:4,15:16:45.15:1294,45,0	1/1:3,11:14:42.11:1100,42,0	1/1:2,13:13:39.13:1093,39,0	0/0:24,0:23:48.14:0,48,931	1/1:2,8:8:24.08:692,24,0	1/1:4,5:5:11.40:268,11,0	1/1:2,2:4:9.03:206,9,0	0/0:12,0:8:24.08:0,24,503	0/0:16,0:12:33.11:0,33,692	0/0:12,0:7:6.02:0,6,126	1/1:2,7:7:18.06:518,18,0	1/1:1,7:5:15.05:430,15,0	0/1:5,2:5:50.79:244,0,51	1/1:4,10:10:27.09:688,27,0	1/1:0,12:12:36.12:1037,36,0	0/0:13,0:12:24.03:0,24,503	1/1:5,3:1:3.01:87,3,0
chr10	32097161	.	TC	T	3568.44	PASS	AC=30;AF=0.577;AN=52;BaseQRankSum=11.143;DP=342;FS=7.988;HRun=5;HaplotypeScore=89.0609;InbreedingCoeff=0.9120;MQ=36.05;MQ0=30;MQRankSum=-7.765;QD=22.16;ReadPosRankSum=4.421;VQSLOD=2.3150;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,14:15:17.06:293,17,0	0/0:6,0:6:6.02:0,6,82	./.	./.	0/0:24,0:21:29.97:0,30,402	0/0:11,0:9:18.03:0,18,214	0/0:14,0:14:27.05:0,27,347	0/0:16,0:10:8.98:0,9,102	0/0:15,0:15:24.07:0,24,314	1/1:0,7:7:18.05:204,18,0	1/1:4,17:19:45.10:498,45,0	1/1:1,12:10:27.08:306,27,0	1/1:0,11:11:33.09:374,33,0	1/1:1,11:11:30.09:338,30,0	0/0:22,0:21:36.12:0,36,491	1/1:4,7:9:21.06:236,21,0	1/1:6,5:7:11.99:136,12,0	1/1:0,6:6:18.05:204,18,0	0/0:16,0:15:36.02:0,36,426	0/0:16,0:15:33.10:0,33,433	0/0:22,0:17:42.14:0,42,574	1/1:1,4:3:9.03:102,9,0	1/1:1,4:2:3.01:34,3,0	1/1:4,5:7:18.05:200,18,0	1/1:0,12:8:24.07:272,24,0	1/1:1,10:11:27.08:305,27,0	0/0:19,0:19:42.14:0,42,570	1/1:5,3:3:6.02:68,6,0
chr10	32097188	.	CCCT	C	6014.75	PASS	AB=0.792;AC=30;AF=0.536;AN=56;BaseQRankSum=9.187;DP=342;FS=0.000;HRun=0;HaplotypeScore=82.6406;InbreedingCoeff=0.8458;MQ=42.31;MQ0=17;MQRankSum=-10.100;QD=34.57;ReadPosRankSum=-0.146;VQSLOD=5.0941;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,20:22:60.20:981,60,0	0/0:5,0:5:12.04:0,12,268	0/1:9,0:2:0.93:1,0,52	0/0:10,0:5:12.04:0,12,268	0/0:12,0:11:21.07:0,21,467	0/0:7,0:7:21.07:0,21,470	0/0:12,0:12:33.11:0,33,714	0/0:17,0:14:33.11:0,33,725	0/0:15,0:15:33.10:0,33,736	1/1:2,6:7:12.04:204,12,0	1/1:1,16:17:39.09:633,39,0	1/1:3,8:10:24.08:408,24,0	1/1:0,15:15:45.15:766,45,0	1/1:1,8:9:24.08:408,24,0	0/0:27,0:26:57.20:0,57,1250	1/1:1,9:9:27.09:460,27,0	1/1:4,10:12:15.05:255,15,0	1/1:1,6:7:18.06:307,18,0	0/0:9,0:9:27.08:0,27,507	0/0:11,0:11:22.32:0,22,458	0/0:24,0:21:54.19:0,54,1208	1/1:1,5:4:9.03:153,9,0	1/1:4,7:9:14.96:255,15,0	0/1:2,5:7:50.76:189,0,51	1/1:0,10:10:30.10:497,30,0	1/1:4,7:11:26.99:396,27,0	0/0:19,0:19:49.41:0,49,1041	1/1:2,2:2:6.02:102,6,0
chr10	32097335	.	TC	T	7875.27	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=13.689;DP=487;FS=4.585;HRun=3;HaplotypeScore=62.1513;InbreedingCoeff=0.9940;MQ=82.14;MQ0=0;MQRankSum=-12.086;QD=33.23;ReadPosRankSum=6.300;VQSLOD=4.8148;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,31:31:81.25:1001,81,0	0/0:8,0:8:21.07:0,21,302	0/0:18,0:19:56.98:0,57,769	0/0:16,0:15:44.74:0,45,610	0/0:17,0:17:51.16:0,51,715	0/0:17,0:17:51.17:0,51,734	0/0:23,0:23:69.23:0,69,992	0/0:20,0:20:51.17:0,51,730	0/0:19,0:19:54.18:0,54,778	1/1:1,18:19:54.17:667,54,0	1/1:1,10:11:27.08:334,27,0	1/1:0,12:12:25.89:303,26,0	1/1:0,26:26:75.24:929,75,0	1/1:0,16:16:36.11:445,36,0	0/0:33,0:33:96.31:0,96,1354	1/1:0,30:30:87.27:1078,87,0	1/1:0,9:9:27.08:334,27,0	1/1:0,13:13:36.11:446,36,0	0/0:14,0:14:42.13:0,42,586	0/0:16,0:16:42.14:0,42,605	0/0:18,0:18:54.18:0,54,777	1/1:0,11:11:27.08:334,27,0	1/1:0,8:8:21.07:260,21,0	1/1:0,17:17:48.15:594,48,0	1/1:0,13:13:39.12:483,39,0	1/1:0,16:16:42.13:518,42,0	0/0:30,0:30:84.25:0,84,1171	1/1:0,5:5:12.04:149,12,0
chr10	32097402	.	C	CCT	6730.75	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=17.067;DP=469;FS=32.274;HRun=0;HaplotypeScore=113.8420;InbreedingCoeff=0.9914;MQ=93.68;MQ0=0;MQRankSum=-16.340;QD=42.07;ReadPosRankSum=3.675;VQSLOD=3.4849;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,15:16:47.18:653,47,0	0/0:11,0:11:30.10:0,30,489	0/0:28,0:28:84.24:0,84,1337	0/0:20,0:20:48.16:0,48,767	0/0:39,0:39:99:0,105,1710	0/0:30,0:30:90.31:0,90,1467	0/0:30,0:30:87.27:0,87,1364	0/0:25,0:25:72.25:0,72,1174	0/0:17,0:17:51.16:0,51,803	1/1:1,8:9:27.05:382,27,0	1/1:0,6:6:18.06:251,18,0	1/1:0,11:11:33.11:503,33,0	1/1:3,18:21:60.02:891,60,0	1/1:0,12:12:36.12:531,36,0	0/0:28,0:28:81.26:0,81,1292	1/1:0,12:12:36.12:557,36,0	1/1:2,6:8:18.06:270,18,0	1/1:0,7:7:21.07:320,21,0	0/0:20,0:20:54.17:0,54,850	0/0:18,0:18:51.17:0,51,826	0/0:23,0:23:69.21:0,69,1092	1/1:1,16:17:48.12:679,48,0	1/1:0,9:9:26.12:357,26,0	1/1:0,7:7:20.96:256,21,0	1/1:1,7:7:21.07:310,21,0	1/1:0,13:13:39.13:589,39,0	0/0:20,0:20:57.19:0,57,920	1/1:0,4:4:12.04:182,12,0
chr10	32097403	.	A	AATTTC	14510.47	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=17.701;DP=518;FS=35.386;HRun=0;HaplotypeScore=139.8839;InbreedingCoeff=0.9944;MQ=89.21;MQ0=0;MQRankSum=-17.587;QD=72.55;ReadPosRankSum=2.495;VQSLOD=3.8994;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,14:21:57.19:1462,57,0	0/0:11,0:11:30.10:0,30,650	0/0:28,0:28:84.26:0,84,1768	0/0:19,0:19:51.15:0,51,1047	0/0:40,0:40:99:0,114,2363	0/0:30,0:30:87.30:0,87,1915	0/0:31,0:31:90.27:0,90,1829	0/0:25,0:25:72.24:0,72,1531	0/0:18,0:18:48.12:0,48,1022	1/1:3,8:11:30.10:818,30,0	1/1:2,6:8:24.08:649,24,0	1/1:3,10:13:36.12:965,36,0	1/1:13,15:28:78.23:1916,78,0	1/1:3,10:14:42.14:1065,42,0	0/0:29,0:29:84.28:0,84,1809	1/1:8,10:18:48.16:1258,48,0	1/1:5,6:11:26.58:670,27,0	1/1:1,7:8:24.08:652,24,0	0/0:21,0:21:57.19:0,57,1199	0/0:20,0:20:51.18:0,51,1124	0/0:23,0:23:66.23:0,66,1429	1/1:2,16:18:48.16:1275,48,0	1/1:2,9:11:33.11:833,33,0	1/1:2,7:9:27.09:740,27,0	1/1:3,7:9:24.08:646,24,0	1/1:3,13:16:45.15:1235,45,0	0/0:23,0:23:57.19:0,57,1201	1/1:0,4:4:12.04:326,12,0
chr10	32098257	.	ATTGTGTGTGTGTGT	A	5557.26	PASS	AB=1.000;AC=35;AF=0.648;AN=54;BaseQRankSum=0.735;DP=390;FS=0.000;HRun=0;HaplotypeScore=121.0972;InbreedingCoeff=0.6254;MQ=58.46;MQ0=20;MQRankSum=0.647;QD=21.05;ReadPosRankSum=2.678;VQSLOD=3.6468;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:21:44.94:391,45,0	0/0:4,0:4:12.01:0,12,162	0/0:20,0:5:14.21:0,14,128	0/0:15,0:4:2.97:0,3,21	0/0:18,0:16:40.76:0,41,500	0/0:20,0:18:50.35:0,50,641	0/0:11,0:7:17.97:0,18,207	1/1:18,0:17:47.83:396,48,0	0/0:9,0:7:15.01:0,15,236	0/1:14,0:13:99:281,0,175	1/1:0,0:13:6.02:177,6,0	1/1:4,2:7:0.92:360,1,0	1/1:1,14:14:8.60:359,9,0	1/1:16,1:18:44.94:550,45,0	0/0:13,0:13:36.03:0,36,743	1/1:1,13:13:2.63:129,3,0	0/1:20,0:18:26.37:296,0,26	0/1:7,0:7:2.11:88,0,2	1/1:0,17:17:47.90:496,48,0	1/1:0,15:15:9.03:297,9,0	1/1:4,0:2:3:25,3,0	1/1:6,0:6:14.96:120,15,0	1/1:14,0:15:32.89:370,33,0	./.	1/1:13,0:12:32.96:276,33,0	1/1:15,0:13:38.94:332,39,0	1/1:17,0:16:46.91:366,47,0	1/1:12,0:11:32.76:247,33,0
chr10	32098958	.	ACTGACCTTCACCCCTAGC	A	30687.69	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=19.020;DP=704;FS=9.494;HRun=0;HaplotypeScore=333.2484;InbreedingCoeff=0.9733;MQ=85.70;MQ0=0;MQRankSum=-18.350;QD=89.21;ReadPosRankSum=6.727;VQSLOD=3.4067;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,19:22:15.05:761,15,0	0/0:13,0:13:39.13:0,39,2855	0/0:34,0:34:89.33:0,89,4588	0/0:21,0:21:54.15:0,54,2979	0/0:35,0:35:99:0,99,7039	0/0:38,0:38:99:0,105,7597	0/0:21,0:21:63.21:0,63,4976	0/0:40,0:40:99:0,105,6371	0/0:26,0:26:78.27:0,78,5948	1/1:2,23:25:60.67:2809,61,0	1/1:0,29:29:63.22:2875,63,0	1/1:3,17:20:42.14:2131,42,0	1/1:4,29:33:60.68:3046,61,0	1/1:4,23:27:57.20:2894,57,0	0/0:28,0:28:84.27:0,84,6473	1/1:1,28:29:57.20:2875,57,0	1/1:2,19:21:18.06:895,18,0	1/1:1,5:6:6.02:305,6,0	0/0:17,0:17:48.12:0,48,2027	0/0:29,0:29:78.24:0,78,5139	0/0:22,0:22:63.22:0,63,5149	1/1:3,23:26:54.19:2730,54,0	1/1:0,24:24:50.65:2544,51,0	1/1:2,18:20:18.06:786,18,0	1/1:3,23:26:48.16:2436,48,0	1/1:1,27:28:75.09:3143,75,0	0/0:36,0:36:99:0,108,8309	1/1:1,7:8:9.03:456,9,0
chr10	32099859	.	C	CA	15221.54	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=8.564;DP=687;FS=10.839;HRun=6;HaplotypeScore=116.2507;InbreedingCoeff=0.9988;MQ=68.20;MQ0=1;MQRankSum=-2.647;QD=30.88;ReadPosRankSum=2.606;VQSLOD=3.5709;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,34:35:96.31:1208,96,0	0/0:15,0:15:39.09:0,39,398	0/0:29,0:27:55.88:0,56,539	0/0:14,0:13:26.64:0,27,249	0/0:29,0:29:81.18:0,81,826	0/0:24,0:24:69.09:0,69,679	0/0:18,0:18:48.09:0,48,483	1/1:6,21:27:32.71:687,33,0	0/0:27,0:27:75.17:0,75,765	1/1:1,28:29:81.25:1001,81,0	1/1:2,10:12:33.10:411,33,0	1/1:4,16:20:39.12:491,39,0	1/1:5,30:35:84.27:1053,84,0	1/1:0,21:21:57.18:717,57,0	0/0:38,0:38:99:0,105,1040	1/1:3,26:29:35.60:762,36,0	1/1:4,29:33:78.25:981,78,0	1/1:0,8:8:21.07:264,21,0	1/1:3,19:22:57.16:691,57,0	1/1:4,25:29:75.24:944,75,0	1/1:2,28:30:78.22:965,78,0	1/1:7,17:24:48.15:598,48,0	1/1:1,26:27:72.23:906,72,0	1/1:0,12:12:33.11:415,33,0	1/1:4,23:27:63.20:792,63,0	1/1:3,33:36:99:1244,99,0	1/1:3,20:23:60.19:752,60,0	1/1:3,11:14:27.09:340,27,0
chr10	32099981	.	ATATC	A	3183.10	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=7.878;DP=629;FS=9.491;HRun=0;HaplotypeScore=115.4262;InbreedingCoeff=0.9924;MQ=68.01;MQ0=1;MQRankSum=-2.831;QD=30.61;ReadPosRankSum=1.407;VQSLOD=3.1081;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:54.07:0,54,1262	1/1:0,8:8:18.06:311,18,0	0/0:22,0:14:36.12:0,36,829	0/0:12,0:12:14.18:0,14,293	1/1:4,23:27:57.12:922,57,0	1/1:2,27:29:42.14:726,42,0	1/1:1,15:16:33.11:570,33,0	0/0:43,0:43:99:0,105,2529	1/1:1,23:24:48.16:829,48,0	0/0:23,0:23:63.22:0,63,1592	0/0:30,0:30:78.27:0,78,1965	0/0:24,0:24:54.19:0,54,1310	0/0:31,0:31:87.30:0,87,2155	0/0:21,0:21:54.19:0,54,1333	0/0:18,0:18:54.19:0,54,1325	0/0:19,0:19:54.19:0,54,1365	0/0:26,0:26:60.21:0,60,1516	0/0:14,0:14:21.07:0,21,528	0/0:21,0:21:51.17:0,51,1183	0/0:27,0:27:75.26:0,75,1620	0/0:12,0:12:30.10:0,30,657	0/0:27,0:27:72.25:0,72,1819	0/0:12,0:12:33.11:0,33,829	0/0:17,0:17:39.13:0,39,986	0/0:20,0:20:54.19:0,54,1332	0/0:21,0:21:54.18:0,54,1279	0/0:33,0:33:83.30:0,83,1779	0/0:26,0:26:54.19:0,54,1334
chr10	32099997	.	C	CATCT	5212.01	PASS	AB=0.944;AC=11;AF=0.196;AN=56;BaseQRankSum=-11.738;DP=679;FS=1.518;HRun=0;HaplotypeScore=120.7432;InbreedingCoeff=0.8863;MQ=66.01;MQ0=4;MQRankSum=3.060;QD=33.41;ReadPosRankSum=0.029;VQSLOD=4.4800;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:25:47.66:0,48,771	0/0:9,0:9:21.07:0,21,280	0/0:35,0:23:43.98:0,44,636	0/1:16,0:15:16.20:16,0,168	0/0:25,0:25:60.20:0,60,816	0/0:33,0:33:54.18:0,54,723	0/0:20,0:20:42.14:0,42,589	1/1:26,18:47:72.25:1424,72,0	0/0:30,0:30:57.19:0,57,762	0/0:26,0:26:54.18:0,54,899	0/0:33,0:33:75.11:0,75,1173	0/0:22,0:22:51.17:0,51,848	0/0:37,0:37:84.29:0,84,1398	0/0:23,0:23:60.20:0,60,989	0/0:18,0:18:45.14:0,45,724	0/0:21,0:21:57.19:0,57,939	0/0:29,0:30:72.24:0,72,1164	0/0:12,0:12:33.11:0,33,535	1/1:12,6:17:18.06:444,18,0	1/1:6,25:31:60.21:1480,60,0	1/1:1,10:12:27.09:666,27,0	0/0:25,0:25:60.19:0,60,955	0/0:17,0:17:45.15:0,45,740	0/0:18,0:18:45.15:0,45,739	0/0:20,0:20:60.20:0,60,982	0/0:25,0:25:63.21:0,63,1013	1/1:10,21:31:48.16:1183,48,0	0/0:18,0:18:39.13:0,39,649
chr10	32102260	.	T	TA	2047.24	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=-1.694;DP=318;FS=12.404;HRun=6;HaplotypeScore=39.7748;InbreedingCoeff=0.8343;MQ=63.97;MQ0=0;MQRankSum=-0.919;QD=26.94;ReadPosRankSum=-2.891;VQSLOD=1.5083;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:18.04:0,18,184	0/0:2,0:2:6.01:0,6,61	0/1:6,0:3:3.99:4,0,25	0/0:4,0:3:3:0,3,28	0/0:23,0:23:63.14:0,63,643	0/0:16,0:16:45.09:0,45,454	0/0:7,0:7:21.02:0,21,206	1/1:3,23:26:68.88:841,69,0	0/0:9,0:9:24.04:0,24,237	0/0:14,0:14:39.08:0,39,394	0/0:20,0:20:54.11:0,54,544	0/0:5,0:5:15.03:0,15,153	0/0:14,0:14:30.07:0,30,306	0/0:12,0:12:30.07:0,30,306	0/0:16,0:16:36.01:0,36,354	0/0:11,0:11:27.06:0,27,275	0/0:8,0:8:21.01:0,21,200	0/0:9,0:9:18.04:0,18,184	1/1:2,11:13:36.12:453,36,0	1/1:4,10:14:36.06:421,36,0	1/1:3,3:6:15.02:163,15,0	0/0:3,0:3:9.02:0,9,92	0/0:11,0:11:30.05:0,30,299	0/0:6,0:6:15.03:0,15,153	0/0:15,0:15:42.10:0,42,429	0/0:13,0:13:36.08:0,36,367	1/1:3,8:11:27.09:339,27,0	0/0:13,0:13:27.06:0,27,275
chr10	32102296	.	GATGT	G	2446.40	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=1.579;DP=270;FS=4.105;HRun=0;HaplotypeScore=57.6966;InbreedingCoeff=0.7931;MQ=70.45;MQ0=2;MQRankSum=-4.810;QD=38.83;ReadPosRankSum=-1.312;VQSLOD=2.8015;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:8:12.02:0,12,201	0/0:2,0:2:6.02:0,6,136	0/0:15,0:6:8.67:0,9,75	0/0:11,0:6:5.77:0,6,31	0/0:15,0:15:45.04:0,45,882	0/0:16,0:16:48.07:0,48,1038	0/0:4,0:4:12.04:0,12,286	1/1:7,9:16:45.02:719,45,0	0/0:4,0:4:12.04:0,12,295	0/0:11,0:11:32.88:0,33,550	0/0:16,0:16:39.13:0,39,781	0/0:3,0:3:9.01:0,9,141	0/0:10,0:10:21.07:0,21,426	0/0:5,0:5:9:0,9,106	0/0:8,0:8:24.06:0,24,559	0/0:8,0:8:21.01:0,21,289	0/0:6,0:6:15.03:0,15,283	0/0:7,0:7:8.95:0,9,100	1/1:4,9:13:39.08:599,39,0	1/1:3,17:20:42.10:713,42,0	1/1:1,2:3:3.01:58,3,0	0/0:1,0:1:2.99:0,3,24	0/0:5,0:5:12.01:0,12,155	0/0:6,0:6:15.05:0,15,294	0/0:17,0:17:51.08:0,51,822	0/0:12,0:12:33.08:0,33,568	1/1:1,10:10:27.09:522,27,0	0/0:17,0:17:33.02:0,33,573
chr10	32102297	.	ATG	A	1023.59	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=6.942;DP=272;FS=7.420;HRun=0;HaplotypeScore=53.8047;InbreedingCoeff=0.7836;MQ=70.23;MQ0=2;MQRankSum=-3.214;QD=15.75;ReadPosRankSum=-2.389;VQSLOD=1.9404;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:8:12.02:0,12,123	0/0:2,0:2:6.01:0,6,84	0/0:15,0:6:8.24:0,8,67	0/0:11,0:6:5.77:0,6,31	0/0:16,0:16:33.23:0,33,677	0/0:16,0:16:33.13:0,33,742	0/0:4,0:4:12.03:0,12,188	1/1:17,1:18:50.36:360,50,0	0/0:4,0:4:12.02:0,12,197	0/0:11,0:11:32.70:0,33,338	0/0:16,0:16:39.08:0,39,451	0/0:3,0:3:9.01:0,9,89	0/0:10,0:10:21.06:0,21,246	0/0:5,0:5:9:0,9,80	0/0:8,0:8:24.07:0,24,419	0/0:8,0:8:21.01:0,21,213	0/0:6,0:6:15.03:0,15,180	0/0:7,0:7:8.95:0,9,74	1/1:12,1:13:38.85:318,39,0	1/1:17,3:20:41.70:301,42,0	1/1:3,0:3:2.97:20,3,0	0/0:1,0:1:2.99:0,3,24	0/0:5,0:5:11.99:0,12,105	0/0:5,0:5:15.04:0,15,164	0/0:17,0:17:39.61:0,40,483	0/0:11,0:11:33.06:0,33,361	1/1:11,0:10:26.77:189,27,0	0/0:18,0:18:10.42:0,10,306
chr10	32102299	.	G	GTA	2975.24	PASS	AB=0.576;AC=26;AF=0.500;AN=52;BaseQRankSum=-8.938;DP=279;FS=23.466;HRun=0;HaplotypeScore=47.7261;InbreedingCoeff=0.5024;MQ=70.15;MQ0=2;MQRankSum=2.612;QD=19.57;ReadPosRankSum=2.754;VQSLOD=1.4369;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,6:8:9.03:148,9,0	0/0:2,0:2:6.01:0,6,63	1/1:15,0:6:4.26:13,4,0	./.	0/0:16,0:17:32.90:0,33,357	0/0:15,0:16:38.94:0,39,447	0/0:4,0:4:6.02:0,6,74	0/0:18,0:18:34.70:0,35,179	0/0:4,0:4:9.02:0,9,99	0/1:4,7:11:13.12:318,0,13	0/1:4,14:19:6.86:413,0,7	1/1:1,2:3:6.02:98,6,0	1/1:1,9:10:18.06:295,18,0	1/1:1,2:3:3.01:49,3,0	0/0:8,0:8:21.03:0,21,233	1/1:6,2:8:6.02:98,6,0	0/1:2,6:8:24.87:135,0,25	1/1:3,6:9:3.01:49,3,0	0/0:13,0:13:23.23:0,23,113	0/0:20,0:20:31.25:0,31,154	0/0:3,0:3:2.84:0,3,14	./.	1/1:3,2:5:3.01:49,3,0	1/1:0,5:5:15.05:246,15,0	1/1:7,11:18:30.10:492,30,0	1/1:3,9:12:27.06:392,27,0	0/0:10,0:9:25.57:0,26,126	0/1:4,14:18:31.81:363,0,32
chr10	32102412	.	GTATATATATATATATATATATA	G	4625.04	PASS	AB=0.955;AC=26;AF=0.684;AN=38;BaseQRankSum=0.707;DP=141;FS=27.651;HRun=0;HaplotypeScore=94.5624;InbreedingCoeff=0.4100;MQ=64.64;MQ0=2;MQRankSum=-0.280;QD=51.39;ReadPosRankSum=2.681;VQSLOD=1.9931;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:5:0.89:0,1,2	0/0:1,0:2:5.20:0,5,29	1/1:2,0:2:1.55:4,2,0	0/1:8,0:3:0.01:0,0,0	./.	0/0:4,0:5:2.37:0,2,8	./.	0/0:18,0:18:4.57:0,5,225	./.	./.	1/1:6,2:9:18.06:834,18,0	./.	1/1:5,2:7:15.01:441,15,0	1/1:0,2:2:6.02:351,6,0	./.	1/1:2,3:5:9.03:527,9,0	1/1:2,1:3:5.99:197,6,0	./.	1/1:10,0:10:3.01:113,3,0	1/1:5,0:9:12.04:614,12,0	0/0:1,0:1:0:0,0,0	./.	1/1:1,1:2:6.02:256,6,0	./.	1/1:5,2:7:6.02:351,6,0	1/1:10,1:11:15.04:462,15,0	1/1:3,0:5:6.02:307,6,0	0/1:9,1:10:16.95:167,0,17
chr10	32102459	.	AT	A	2605.76	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=0.974;DP=175;FS=1.449;HRun=6;HaplotypeScore=48.5555;InbreedingCoeff=0.8637;MQ=71.80;MQ0=1;MQRankSum=-1.347;QD=28.32;ReadPosRankSum=1.800;VQSLOD=4.1024;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,4:4:9.02:97,9,0	0/0:2,0:2:6.02:0,6,79	0/0:4,0:3:9.03:0,9,118	0/0:6,0:5:15.05:0,15,197	0/0:4,0:4:12.04:0,12,158	0/0:4,0:4:9.03:0,9,118	0/0:4,0:4:12.04:0,12,158	0/0:18,0:18:45.15:0,45,592	0/0:5,0:5:15.04:0,15,183	1/1:0,5:5:15.03:154,15,0	1/1:0,8:8:21.05:225,21,0	1/1:0,4:4:12.03:129,12,0	1/1:1,8:9:27.07:286,27,0	1/1:0,11:11:33.08:355,33,0	0/0:4,0:4:9.03:0,9,118	1/1:0,6:6:18.05:193,18,0	1/1:0,5:5:15.04:161,15,0	1/1:0,5:5:12.03:129,12,0	0/0:14,0:14:42.12:0,42,536	0/0:9,0:9:27.09:0,27,347	0/0:3,0:3:6.02:0,6,79	1/1:0,8:8:24.06:258,24,0	1/1:0,2:2:6.02:64,6,0	1/1:0,4:4:9.02:97,9,0	1/1:0,12:12:36.09:387,36,0	1/1:0,8:8:24.06:258,24,0	0/0:6,0:5:18.06:0,18,237	1/1:0,1:1:3:29,3,0
chr10	32102489	.	T	TTTAA	5701.99	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-8.412;DP=293;FS=11.944;HRun=0;HaplotypeScore=70.9881;InbreedingCoeff=0.9293;MQ=81.76;MQ0=0;MQRankSum=-5.166;QD=73.10;ReadPosRankSum=-1.733;VQSLOD=5.9698;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:7:18.06:0,18,349	0/0:3,0:3:9.03:0,9,174	0/0:9,0:9:27.09:0,27,523	0/0:10,0:10:30.09:0,30,479	0/0:10,0:10:24.08:0,24,465	0/0:7,0:7:21.07:0,21,397	0/0:5,0:5:15.05:0,15,291	1/1:11,12:27:78.27:1987,78,0	0/0:8,0:8:24.08:0,24,465	0/0:8,0:8:24.08:0,24,458	0/0:11,0:11:33.10:0,33,604	0/0:12,0:12:36.12:0,36,693	0/0:17,0:17:48.16:0,48,928	0/0:13,0:13:36.08:0,36,658	0/0:12,0:12:30.10:0,30,581	0/0:8,0:8:21.06:0,21,374	0/0:6,0:6:18.06:0,18,349	0/0:10,0:10:24.03:0,24,394	1/1:0,19:20:60.17:1582,60,0	1/1:2,11:13:39.13:1016,39,0	1/1:2,4:6:15.01:322,15,0	0/0:10,0:10:30.10:0,30,581	0/0:6,0:6:18.06:0,18,349	0/0:7,0:7:18.06:0,18,349	0/0:21,0:21:63.22:0,63,1219	0/0:14,0:14:42.14:0,42,814	1/1:0,11:11:30.10:794,30,0	0/0:1,0:1:3.01:0,3,58
chr10	32102927	.	AG	A	4808.45	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=15.203;DP=611;FS=5.184;HRun=1;HaplotypeScore=70.4284;InbreedingCoeff=0.9856;MQ=89.35;MQ0=0;MQRankSum=-3.660;QD=38.47;ReadPosRankSum=-0.810;VQSLOD=5.0748;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:72.24:0,72,1135	0/0:13,0:13:39.13:0,39,621	0/0:25,0:25:75.25:0,75,1161	0/0:22,0:22:66.19:0,66,988	0/0:26,0:26:75.26:0,75,1199	0/0:27,0:27:81.24:0,81,1240	0/0:27,0:27:81.28:0,81,1290	1/1:0,33:33:90.29:1238,90,0	0/0:20,0:20:60.20:0,60,947	0/0:38,0:38:99:0,114,1783	0/0:22,0:22:66.21:0,66,992	0/0:22,0:22:66.21:0,66,1015	0/0:28,0:28:84.29:0,84,1341	0/0:23,0:23:69.24:0,69,1101	0/0:26,0:26:78.23:0,78,1198	0/0:20,0:19:60.20:0,60,957	0/0:14,0:14:39.13:0,39,621	0/0:10,0:10:21.07:0,21,335	1/1:0,18:18:54.15:730,54,0	1/1:0,31:31:90.30:1249,90,0	1/1:0,19:19:57.19:797,57,0	0/0:24,0:24:69.23:0,69,1093	0/0:16,0:16:48.15:0,48,744	0/0:16,0:16:48.16:0,48,767	0/0:19,0:19:57.18:0,57,887	0/0:21,0:21:63.21:0,63,1006	1/1:1,23:23:57.19:794,57,0	0/0:3,0:3:9.03:0,9,144
chr10	32104246	.	C	CT	2377.03	PASS	AB=0.718;AC=50;AF=0.893;AN=56;BaseQRankSum=1.472;DP=591;FS=1.277;HRun=18;HaplotypeScore=101.4059;InbreedingCoeff=0.3423;MQ=61.33;MQ0=5;MQRankSum=-0.704;QD=4.18;ReadPosRankSum=0.145;VQSLOD=0.8377;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:49,0:51:58.70:252,59,0	1/1:0,1:7:11.53:66,12,0	0/0:11,0:4:2.66:0,3,12	0/0:12,0:10:3.66:0,4,18	0/1:15,1:35:12.99:140,0,13	1/1:12,1:26:8.48:36,8,0	1/1:8,8:16:7.40:33,7,0	1/1:40,0:38:4.28:29,4,0	1/1:15,0:15:16.08:76,16,0	1/1:22,0:21:24.58:104,25,0	1/1:31,0:31:38.41:174,38,0	1/1:12,0:13:13.81:62,14,0	1/1:22,0:23:16.58:76,17,0	1/1:17,0:17:12.07:58,12,0	0/1:19,7:26:11.05:11,0,30	1/1:16,0:16:27.48:122,27,0	1/1:22,0:22:20.55:86,21,0	1/1:6,0:5:8.23:36,8,0	1/1:27,0:25:19.56:105,20,0	1/1:12,0:23:20.43:103,20,0	1/1:5,0:5:3.45:21,3,0	1/1:19,0:20:32.84:148,33,0	1/1:16,0:16:18.35:81,18,0	1/1:11,0:12:10.97:48,11,0	1/1:25,0:22:32.90:144,33,0	1/1:22,0:22:45.04:196,45,0	1/1:40,0:38:37.75:195,38,0	1/1:12,0:12:21.74:94,22,0
chr10	32104249	.	T	TTTTC	5895.46	PASS	AB=0.992;AC=35;AF=0.625;AN=56;BaseQRankSum=10.383;DP=585;FS=3.620;HRun=0;HaplotypeScore=111.1225;InbreedingCoeff=0.2733;MQ=59.43;MQ0=5;MQRankSum=0.768;QD=12.46;ReadPosRankSum=7.609;VQSLOD=3.8481;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:49,3:52:56.40:786,56,0	0/1:8,0:8:28.39:28,0,54	0/0:11,0:4:8.81:0,9,85	0/0:10,0:8:0.69:0,1,80	0/1:32,0:32:30.19:30,0,338	0/0:25,0:25:16.38:0,16,155	0/1:14,0:14:15.17:15,0,82	0/0:37,0:35:76.59:0,77,569	0/1:14,0:14:13.60:14,0,84	1/1:24,0:23:30.79:490,31,0	1/1:32,1:33:64.45:652,64,0	0/1:12,1:13:2.99:158,0,3	1/1:24,0:24:17.76:185,18,0	1/1:17,0:17:45.87:332,46,0	0/0:25,0:25:57.07:0,57,584	1/1:15,1:16:29.89:399,30,0	0/1:22,0:22:4.88:211,0,5	1/1:6,0:5:9.03:105,9,0	0/1:26,0:24:61.49:61,0,207	0/1:24,0:24:99:103,0,141	0/0:4,0:4:6.56:0,7,30	1/1:21,0:21:43.08:427,43,0	1/1:17,0:17:23.54:253,24,0	1/1:11,0:11:14.42:121,14,0	1/1:25,0:23:15.84:370,16,0	1/1:25,0:25:56.53:685,57,0	0/1:38,0:36:99:190,0,215	1/1:11,0:11:23.88:280,24,0
chr10	32104250	.	T	TTTC	7540.95	PASS	AB=0.946;AC=35;AF=0.625;AN=56;BaseQRankSum=7.229;DP=591;FS=4.245;HRun=0;HaplotypeScore=97.2507;InbreedingCoeff=0.3719;MQ=59.46;MQ0=5;MQRankSum=1.475;QD=16.61;ReadPosRankSum=7.968;VQSLOD=3.6928;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:10,41:52:61.97:1054,62,0	0/1:8,0:8:40.48:40,0,51	0/0:11,0:4:8.81:0,9,79	0/0:10,0:8:0.60:0,1,64	0/1:32,0:32:26.09:26,0,319	0/0:25,0:25:5.19:0,5,145	0/1:14,0:14:13.74:14,0,99	0/0:36,0:34:77.89:0,78,576	0/1:14,0:14:11.89:12,0,86	1/1:4,19:24:43:647,43,0	1/1:3,29:33:68.28:836,68,0	0/1:6,6:15:3.11:195,0,3	1/1:2,22:24:17.99:267,18,0	1/1:17,0:17:49.01:400,49,0	0/0:25,0:25:57.06:0,57,569	1/1:2,13:17:29.98:487,30,0	1/1:5,13:22:2.46:347,2,0	1/1:3,4:6:9:163,9,0	0/0:26,0:24:16.06:0,16,239	0/1:24,0:24:57.42:57,0,142	0/0:4,0:4:7.22:0,7,33	1/1:6,13:20:41:528,41,0	1/1:1,17:18:23.67:387,24,0	1/1:2,9:11:14.51:185,15,0	1/1:7,17:24:13.92:536,14,0	1/1:3,20:27:67.42:912,67,0	0/1:38,0:36:46.41:46,0,244	1/1:1,7:10:24.06:401,24,0
chr10	32104251	.	T	TTC	4405.32	PASS	AB=0.979;AC=31;AF=0.554;AN=56;BaseQRankSum=9.113;DP=583;FS=3.296;HRun=0;HaplotypeScore=95.2314;InbreedingCoeff=0.7488;MQ=58.40;MQ0=5;MQRankSum=2.866;QD=12.34;ReadPosRankSum=7.963;VQSLOD=3.9457;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:51,1:52:28.66:566,29,0	0/1:8,0:8:2.58:3,0,58	0/0:10,0:3:8.81:0,9,74	0/0:10,0:8:0.73:0,1,69	0/1:30,0:30:7.09:7,0,296	0/0:25,0:25:15.72:0,16,179	0/0:14,0:14:21.14:0,21,135	0/0:35,0:33:94.97:0,95,697	0/0:14,0:14:16.99:0,17,162	1/1:23,1:23:9.10:397,9,0	1/1:31,0:31:37.76:473,38,0	0/1:14,1:15:8.19:117,0,8	1/1:23,1:24:17.79:154,18,0	1/1:17,0:17:32.37:289,32,0	0/0:25,0:25:57.04:0,57,564	1/1:17,0:18:29.74:286,30,0	1/1:22,0:22:15.78:208,16,0	1/1:8,0:7:8.84:80,9,0	0/0:27,0:25:56.15:0,56,365	0/0:24,0:24:20.64:0,21,231	0/0:4,0:4:7.95:0,8,44	1/1:19,1:20:31.12:369,31,0	1/1:14,1:15:23.70:192,24,0	1/1:11,1:12:14.30:122,14,0	1/1:24,2:24:14.13:372,14,0	1/1:25,0:25:43.42:539,43,0	0/0:38,0:36:73.25:0,73,454	1/1:9,1:10:24.02:232,24,0
chr10	32104252	.	T	TC	1803.89	PASS	AB=0.969;AC=23;AF=0.411;AN=56;BaseQRankSum=11.321;DP=577;FS=1.197;HRun=0;HaplotypeScore=92.2096;InbreedingCoeff=0.4104;MQ=58.32;MQ0=5;MQRankSum=1.021;QD=5.67;ReadPosRankSum=8.325;VQSLOD=3.0103;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:51,1:52:8.76:207,9,0	0/0:8,0:8:17.50:0,17,95	0/0:10,0:3:8.81:0,9,70	0/0:10,0:8:0.21:0,0,61	0/0:29,0:29:54.21:0,54,387	0/0:25,0:25:32.61:0,33,238	0/0:14,0:14:23.79:0,24,173	0/0:35,0:33:95.84:0,96,706	0/0:14,0:14:37.86:0,38,265	0/1:24,1:24:5.37:268,0,5	1/1:29,0:29:17.70:250,18,0	0/1:15,0:15:32.50:32,0,34	1/1:25,0:25:11.96:52,12,0	1/1:16,1:17:10.88:217,11,0	0/0:25,0:25:56.29:0,56,541	1/1:19,0:19:4.70:103,5,0	0/1:20,2:22:24.79:85,0,25	0/1:8,0:7:11.64:26,0,12	0/0:26,0:24:65.75:0,66,481	0/0:22,0:22:52.22:0,52,364	0/0:3,0:3:8.14:0,8,46	0/1:17,1:19:11.94:176,0,12	1/1:15,0:15:20.61:92,21,0	0/1:12,0:12:7.77:35,0,8	1/1:25,0:23:4.83:133,5,0	0/1:25,0:25:22.32:218,0,22	0/0:38,0:36:76.47:0,76,574	1/1:10,0:10:22.11:101,22,0
chr10	32104662	.	C	CTT	14040.77	PASS	AB=0.714;AC=53;AF=0.946;AN=56;BaseQRankSum=-1.616;DP=600;FS=0.000;HRun=8;HaplotypeScore=84.3565;InbreedingCoeff=0.6024;MQ=73.23;MQ0=3;MQRankSum=-3.185;QD=23.72;ReadPosRankSum=3.295;VQSLOD=4.0463;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,17:18:45.15:713,45,0	1/1:0,0:5:12.48:43,12,0	0/1:9,0:14:25.67:53,0,26	0/0:8,0:8:13.98:0,14,165	1/1:3,0:39:50.89:248,51,0	1/1:4,1:34:67.89:271,68,0	1/1:2,0:11:22.46:77,22,0	1/1:5,0:31:63.07:238,63,0	1/1:4,0:17:29.94:103,30,0	1/1:4,21:27:68.71:1034,69,0	1/1:4,23:26:66.22:1039,66,0	1/1:5,18:23:59.69:896,60,0	1/1:2,25:27:80.76:1237,81,0	1/1:0,9:9:15.05:238,15,0	1/1:2,1:28:55.41:228,55,0	1/1:1,13:14:36.12:572,36,0	1/1:3,19:24:63.20:962,63,0	1/1:1,13:16:37.68:570,38,0	1/1:2,0:16:35.44:137,35,0	1/1:3,0:29:29.93:185,30,0	1/1:0,0:8:19.96:69,20,0	1/1:3,28:32:44.77:1111,45,0	1/1:2,24:26:57.19:896,57,0	1/1:1,6:7:18.06:286,18,0	1/1:4,23:30:71.72:1066,72,0	1/1:3,26:32:77.73:1155,78,0	1/1:2,0:33:67.62:236,68,0	1/1:4,7:11:24.08:380,24,0
chr10	32104936	.	A	ACTCT	18556.25	PASS	AB=0.526;AC=29;AF=0.518;AN=56;BaseQRankSum=12.073;DP=637;FS=12.757;HRun=0;HaplotypeScore=117.8399;InbreedingCoeff=0.9238;MQ=86.55;MQ0=0;MQRankSum=-6.766;QD=57.99;ReadPosRankSum=5.028;VQSLOD=5.8675;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,23:25:57.20:1537,57,0	0/0:4,0:4:12.04:0,12,228	0/0:23,0:24:57.16:0,57,1017	0/0:27,0:27:53.86:0,54,1080	0/0:29,0:29:87.30:0,87,1652	0/0:23,0:23:60.16:0,60,1020	0/0:18,0:18:51.17:0,51,935	0/0:46,0:46:99:0,123,2233	0/0:13,0:13:30.09:0,30,538	1/1:2,26:29:78.27:2063,78,0	1/1:1,26:29:60.21:1613,60,0	1/1:1,22:24:48.16:1294,48,0	1/1:1,18:20:42.14:1120,42,0	1/1:1,21:23:45.15:1183,45,0	0/0:37,0:37:99:0,111,2003	0/1:2,17:20:17.84:932,0,18	1/1:1,12:13:27.09:703,27,0	1/1:1,8:10:18.06:485,18,0	0/0:15,0:15:39.13:0,39,716	0/0:28,0:28:84.27:0,84,1563	0/0:30,0:30:87.28:0,87,1620	1/1:2,28:30:66.23:1781,66,0	1/1:3,23:26:45.15:1204,45,0	1/1:0,23:23:51.18:1375,51,0	1/1:0,18:19:48.16:1295,48,0	1/1:1,18:19:51.65:1323,52,0	0/0:23,0:23:66.23:0,66,1246	1/1:1,8:9:24.08:648,24,0
chr10	32105027	.	AAC	A	2747.26	PASS	AB=0.977;AC=11;AF=0.196;AN=56;BaseQRankSum=-0.843;DP=707;FS=1.680;HRun=0;HaplotypeScore=181.4304;InbreedingCoeff=0.7139;MQ=56.55;MQ0=6;MQRankSum=6.707;QD=14.46;ReadPosRankSum=1.464;VQSLOD=3.8525;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:26:5.72:0,6,37	0/0:7,0:9:6:0,6,53	0/1:41,1:25:13.62:14,0,232	0/0:28,0:23:38.19:0,38,495	0/0:25,0:28:5.36:0,5,52	0/0:17,0:21:8.51:0,9,78	0/0:18,0:25:11.94:0,12,125	1/1:22,20:42:16.41:603,16,0	0/0:16,0:20:15.01:0,15,149	0/0:20,0:23:51.28:0,51,470	0/0:29,0:29:9:0,9,78	0/0:22,0:24:8.67:0,9,93	0/0:18,0:20:12.01:0,12,121	0/0:25,0:27:8.72:0,9,78	0/0:41,0:41:87.30:0,87,1350	0/0:24,0:29:14.94:0,15,130	0/0:17,0:19:12:0,12,105	0/0:9,0:9:8.92:0,9,78	1/1:9,11:19:29.89:328,30,0	1/1:5,15:20:42.12:485,42,0	1/1:10,27:36:69.20:797,69,0	0/0:21,0:25:12.04:0,12,121	0/0:30,0:32:12.45:0,12,100	0/0:20,0:24:12.15:0,12,104	0/0:28,0:31:23.63:0,24,244	0/0:17,0:20:45.32:0,45,443	1/1:5,24:29:60.18:693,60,0	0/0:2,0:4:6:0,6,52
chr10	32106914	.	G	GTA	1936.83	PASS	AB=0.850;AC=13;AF=0.433;AN=30;BaseQRankSum=-6.560;DP=230;FS=4.776;HRun=0;HaplotypeScore=50.2818;InbreedingCoeff=0.6014;MQ=70.97;MQ0=1;MQRankSum=-0.808;QD=19.76;ReadPosRankSum=-0.463;VQSLOD=2.8909;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,0:5:5.98:46,6,0	0/0:5,0:5:12.03:0,12,135	0/0:4,0:4:8.97:0,9,78	0/1:9,0:7:4.49:4,0,27	0/0:21,0:23:47.81:0,48,541	0/0:21,0:21:39.08:0,39,449	0/0:8,0:8:6.02:0,6,73	1/1:15,16:32:48.08:668,48,0	0/0:6,0:7:17.88:0,18,185	./.	./.	./.	0/1:6,0:6:0:0,0,0	./.	0/0:12,0:13:35.93:0,36,407	./.	./.	./.	1/1:7,14:20:8.49:645,8,0	1/1:0,9:10:15.05:243,15,0	1/1:0,4:4:6.02:97,6,0	./.	./.	./.	./.	./.	0/1:2,9:11:9.56:362,0,10	./.
chr10	32106952	.	A	AT	2579.17	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=0.728;DP=288;FS=47.208;HRun=5;HaplotypeScore=41.2483;InbreedingCoeff=0.9171;MQ=88.75;MQ0=1;MQRankSum=-3.823;QD=33.50;ReadPosRankSum=0.006;VQSLOD=0.2366;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,10:11:30.10:395,30,0	0/0:6,0:6:15.04:0,15,161	0/0:14,0:14:36.09:0,36,385	0/0:13,0:13:36.07:0,36,376	0/0:23,0:23:66.14:0,66,699	0/0:17,0:17:48.12:0,48,515	0/0:6,0:6:15.04:0,15,161	0/0:38,0:38:96.22:0,96,1022	0/0:11,0:11:30.07:0,30,322	1/1:0,7:7:21.07:276,21,0	1/1:0,5:5:12.04:158,12,0	1/1:0,4:4:12.04:158,12,0	1/1:0,5:5:15.05:197,15,0	1/1:0,5:5:15.05:197,15,0	0/0:8,0:8:24.06:0,24,258	1/1:0,2:2:6.02:79,6,0	1/1:2,9:11:21.07:276,21,0	1/1:0,2:2:6.02:79,6,0	0/0:22,0:21:60.12:0,60,623	0/0:22,0:22:63.14:0,63,669	0/0:7,0:7:15.04:0,15,161	1/1:0,4:4:12.04:158,12,0	1/1:0,3:3:9.03:118,9,0	1/1:0,2:2:6.02:79,6,0	1/1:0,5:5:15.05:197,15,0	1/1:0,7:7:21.07:276,21,0	0/0:24,0:24:69.17:0,69,741	1/1:0,4:4:12.04:158,12,0
chr10	32109416	.	T	TC	8178.36	PASS	AB=0.600;AC=29;AF=0.518;AN=56;BaseQRankSum=10.975;DP=561;FS=16.707;HRun=6;HaplotypeScore=91.1928;InbreedingCoeff=0.9399;MQ=88.86;MQ0=0;MQRankSum=-2.826;QD=29.00;ReadPosRankSum=4.786;VQSLOD=3.4387;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,17:21:51.16:635,51,0	0/0:16,0:16:42.09:0,42,428	0/0:21,0:21:54.05:0,54,530	0/0:20,0:20:25.50:0,26,372	0/0:25,0:25:54.07:0,54,539	0/0:27,0:27:72.09:0,72,710	0/0:19,0:19:57.10:0,57,572	0/0:31,0:31:78.13:0,78,784	0/0:12,0:12:30.05:0,30,299	1/1:1,26:27:75.22:915,75,0	1/1:0,14:14:42.13:523,42,0	1/1:1,12:13:36.11:448,36,0	1/1:4,19:23:51.08:614,51,0	1/1:0,12:12:30.09:374,30,0	0/0:24,0:24:72.12:0,72,723	0/1:4,8:12:6.53:238,0,7	1/1:3,18:21:54.17:673,54,0	1/1:2,7:9:18.06:224,18,0	0/0:20,0:20:42.02:0,42,405	0/0:19,0:19:45.98:0,46,460	0/0:20,0:21:53:0,53,503	1/1:6,15:21:36.05:429,36,0	1/1:2,22:24:51.16:636,51,0	1/1:2,11:13:36.10:436,36,0	1/1:2,28:30:60.19:749,60,0	1/1:3,16:20:45.11:538,45,0	0/0:24,0:24:63.13:0,63,636	1/1:0,22:22:60.19:747,60,0
chr10	32109636	.	T	TC	13638.58	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-18.607;DP=664;FS=0.000;HRun=2;HaplotypeScore=57.3393;InbreedingCoeff=0.9992;MQ=86.68;MQ0=0;MQRankSum=-2.593;QD=39.42;ReadPosRankSum=3.552;VQSLOD=5.1730;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,16:17:45.15:648,45,0	0/0:9,0:9:27.07:0,27,321	0/0:14,0:14:39.12:0,39,483	0/0:30,0:30:84.15:0,84,1012	0/0:30,0:30:87.26:0,87,1065	0/0:27,0:27:81.23:0,81,979	0/0:10,0:10:30.08:0,30,359	0/0:32,0:32:93.28:0,93,1132	0/0:24,0:24:72.23:0,72,891	1/1:0,31:31:93.31:1338,93,0	1/1:1,29:30:84.28:1209,84,0	1/1:1,21:22:57.19:821,57,0	1/1:0,31:31:81.27:1165,81,0	1/1:0,19:19:57.19:820,57,0	0/0:25,0:25:72.20:0,72,867	1/1:0,26:25:66.22:951,66,0	1/1:1,21:22:63.14:878,63,0	1/1:0,8:8:21.07:302,21,0	0/0:18,0:18:51.16:0,51,631	0/0:35,0:35:99:0,105,1288	0/0:29,0:29:78.18:0,78,947	1/1:0,25:25:66.22:950,66,0	1/1:1,27:28:78.24:1123,78,0	1/1:1,17:18:45.15:648,45,0	1/1:0,28:28:75.25:1080,75,0	1/1:1,24:25:72.21:1016,72,0	0/0:35,0:34:99:0,102,1226	1/1:0,16:16:48.16:691,48,0
chr10	32109868	.	A	ATT	10880.58	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=5.371;DP=517;FS=8.187;HRun=8;HaplotypeScore=76.5828;InbreedingCoeff=0.9926;MQ=76.41;MQ0=1;MQRankSum=-2.033;QD=28.04;ReadPosRankSum=1.355;VQSLOD=4.3348;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,14:14:39.13:619,39,0	0/0:14,0:14:36.07:0,36,390	0/0:12,0:12:18.73:0,19,176	0/0:11,0:11:14.08:0,14,234	0/0:31,0:31:90.23:0,90,993	0/0:21,0:21:51.11:0,51,565	0/0:9,0:9:21.04:0,21,234	1/1:3,0:32:70.76:242,71,0	0/0:14,0:14:39.07:0,39,415	1/1:1,23:25:71.73:1103,72,0	1/1:2,19:21:57.15:877,57,0	1/1:1,14:15:34:526,34,0	1/1:0,10:10:30.10:476,30,0	1/1:3,12:16:30.10:476,30,0	0/0:17,0:17:45.11:0,45,492	1/1:3,20:23:54.18:857,54,0	1/1:3,11:14:27.09:429,27,0	1/1:1,6:7:21.07:333,21,0	1/1:0,0:19:47.63:192,48,0	1/1:1,0:31:71.72:255,72,0	1/1:4,0:29:52.40:180,52,0	1/1:1,10:11:30.10:476,30,0	1/1:3,9:12:21.07:334,21,0	1/1:0,19:19:54.13:828,54,0	1/1:0,18:18:48.16:762,48,0	1/1:1,29:29:87.27:1333,87,0	1/1:2,0:32:69.87:240,70,0	1/1:0,9:10:23.57:342,24,0
chr10	32111418	.	T	TG	20379.33	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=10.834;DP=730;FS=8.470;HRun=1;HaplotypeScore=126.1801;InbreedingCoeff=0.9973;MQ=86.16;MQ0=0;MQRankSum=-9.957;QD=40.36;ReadPosRankSum=1.941;VQSLOD=3.6628;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,35:40:99:1537,108,0	0/0:14,0:14:39.11:0,39,492	0/0:26,0:26:75.23:0,75,946	0/0:30,0:30:90.23:0,90,1116	0/0:28,0:28:84.25:0,84,1063	0/0:37,0:37:99:0,111,1424	0/0:31,0:31:93.25:0,93,1148	1/1:2,29:31:87.29:1301,87,0	0/0:32,0:32:93.30:0,93,1204	1/1:3,28:31:90.25:1314,90,0	1/1:2,19:21:54.14:782,54,0	1/1:2,24:26:78.26:1148,78,0	1/1:2,30:32:93.30:1370,93,0	1/1:4,28:33:99:1430,99,0	0/0:27,0:27:81.26:0,81,1052	1/1:5,31:36:99:1490,105,0	1/1:3,19:22:66.18:946,66,0	1/1:0,12:12:36.12:528,36,0	1/1:0,18:18:51.16:744,51,0	1/1:2,26:28:75.25:1113,75,0	1/1:0,24:24:63.21:944,63,0	1/1:2,17:19:54.17:787,54,0	1/1:0,15:15:42.14:628,42,0	1/1:3,21:24:60.15:853,60,0	1/1:2,20:21:51.16:743,51,0	1/1:5,27:32:90.28:1308,90,0	1/1:3,29:31:81.15:1188,81,0	1/1:1,6:7:15.05:225,15,0
chr10	32111458	.	CT	C	12253.96	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=15.235;DP=771;FS=13.275;HRun=2;HaplotypeScore=129.4412;InbreedingCoeff=0.9920;MQ=84.15;MQ0=0;MQRankSum=-11.909;QD=32.42;ReadPosRankSum=2.796;VQSLOD=3.1276;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,40:43:99:1260,102,0	0/0:13,0:13:39.12:0,39,566	0/0:27,0:27:71.17:0,71,1049	0/0:28,0:28:83.96:0,84,1125	0/0:29,0:29:84.26:0,84,1208	0/0:35,0:35:99:0,105,1567	0/0:28,0:28:84.21:0,84,1192	0/0:36,0:35:99:0,105,1540	0/0:44,0:44:99:0,132,1968	1/1:1,35:36:99:1307,102,0	1/1:0,21:21:48.16:620,48,0	1/1:3,20:23:60.17:747,60,0	1/1:1,29:30:84.27:1085,84,0	1/1:2,28:30:81.26:1045,81,0	0/0:27,0:27:75.23:0,75,1086	1/1:1,37:38:99:1422,111,0	1/1:0,21:21:54.06:698,54,0	1/1:0,17:17:42.14:543,42,0	0/0:17,0:17:51.13:0,51,700	0/0:32,0:32:96.32:0,96,1413	0/0:33,0:33:99:0,99,1405	1/1:1,21:22:63.20:815,63,0	1/1:2,21:23:51.17:659,51,0	1/1:2,20:22:41.81:543,42,0	1/1:1,18:17:33.11:427,33,0	1/1:2,25:27:78.21:967,78,0	0/0:44,0:43:99:0,126,1824	1/1:2,4:6:9.03:117,9,0
chr10	32112877	.	T	TTCTTAC	21318.60	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-10.649;DP=602;FS=2.416;HRun=0;HaplotypeScore=111.5509;InbreedingCoeff=0.9736;MQ=80.11;MQ0=0;MQRankSum=-17.881;QD=71.06;ReadPosRankSum=0.982;VQSLOD=5.4582;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,12:19:39.13:1250,39,0	0/0:18,0:18:45.15:0,45,998	0/0:22,0:22:45.13:0,45,901	0/0:18,0:18:42.08:0,42,754	0/0:22,0:22:45.15:0,45,998	0/0:23,0:23:54.17:0,54,1156	0/0:17,0:17:51.18:0,51,1114	0/0:33,0:33:72.23:0,72,1471	0/0:21,0:21:60.21:0,60,1330	1/1:10,16:27:57.17:1846,57,0	1/1:8,22:33:66.22:2057,66,0	1/1:5,14:20:42.14:1431,42,0	1/1:9,13:24:48.16:1516,48,0	1/1:3,15:19:48.16:1598,48,0	0/0:20,0:20:57.20:0,57,1264	1/1:4,13:17:42.14:1321,42,0	1/1:7,10:18:33.11:1052,33,0	1/1:5,4:9:15.05:439,15,0	0/0:19,0:19:45.15:0,45,958	0/0:33,0:33:81.26:0,81,1716	0/0:18,0:18:51.18:0,51,1131	1/1:4,14:19:42.14:1405,42,0	1/1:3,20:23:60.21:1995,60,0	1/1:3,0:3:3.01:71,3,0	1/1:5,21:30:66.23:2249,66,0	1/1:11,18:31:72.22:2269,72,0	0/0:38,0:37:96.32:0,96,2073	1/1:0,8:8:24.08:819,24,0
chr10	32116891	.	C	CT	523.01	PASS	AB=1.000;AC=12;AF=0.375;AN=32;BaseQRankSum=-4.441;DP=172;FS=1.236;HRun=10;HaplotypeScore=19.5002;InbreedingCoeff=0.5882;MQ=49.54;MQ0=68;MQRankSum=-0.238;QD=8.17;ReadPosRankSum=-0.371;VQSLOD=-0.1326;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	0/0:4,0:2:5.99:0,6,49	0/0:17,0:5:14.19:0,14,102	0/1:18,0:5:12.17:12,0,28	0/0:10,0:5:11.97:0,12,98	0/0:10,0:10:23.97:0,24,197	0/0:8,0:4:3:0,3,25	1/1:8,3:3:9.02:96,9,0	0/0:4,0:4:8.98:0,9,74	0/1:3,0:1:0:0,0,0	0/0:1,0:1:2.04:0,2,6	./.	./.	./.	0/0:9,0:7:5.98:0,6,49	./.	0/0:6,0:1:2.04:0,2,6	./.	1/1:1,3:3:9.02:95,9,0	1/1:1,8:8:15.04:160,15,0	1/1:4,6:6:15.04:160,15,0	./.	./.	./.	./.	./.	1/1:4,5:6:12.03:128,12,0	./.
chr10	32117419	.	C	CT	10887.38	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-9.871;DP=535;FS=3.163;HRun=8;HaplotypeScore=48.3273;InbreedingCoeff=0.9915;MQ=72.72;MQ0=0;MQRankSum=-2.637;QD=27.29;ReadPosRankSum=2.491;VQSLOD=5.4540;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,27:32:65.28:788,65,0	0/0:10,0:10:18.01:0,18,165	0/0:16,0:12:26.97:0,27,236	0/0:18,0:17:16.72:0,17,212	0/0:30,0:30:60.03:0,60,549	0/0:16,0:16:39.02:0,39,357	0/0:8,0:8:24.01:0,24,220	1/1:8,32:40:96.27:1096,96,0	0/0:17,0:17:45.02:0,45,412	1/1:0,20:21:63.04:697,63,0	1/1:2,17:19:45.13:518,45,0	1/1:1,14:15:36.11:415,36,0	1/1:3,18:21:45.13:517,45,0	1/1:0,17:17:45.13:519,45,0	0/0:21,0:21:57:0,57,516	1/1:3,15:18:42.12:485,42,0	1/1:1,20:21:54.16:623,54,0	1/1:2,7:9:17.69:207,18,0	1/1:3,25:29:78.06:877,78,0	1/1:4,12:16:30.09:346,30,0	1/1:1,8:9:24.07:277,24,0	1/1:4,20:24:60.18:690,60,0	1/1:2,14:16:36.11:415,36,0	1/1:0,16:16:42.12:485,42,0	1/1:2,13:15:27.08:312,27,0	1/1:2,25:27:72.21:829,72,0	1/1:2,19:21:54.16:623,54,0	1/1:3,10:13:15.04:167,15,0
chr10	32117782	.	C	CCTT	27892.07	PASS	AB=0.515;AC=39;AF=0.696;AN=56;BaseQRankSum=-13.685;DP=681;FS=7.867;HRun=0;HaplotypeScore=85.8165;InbreedingCoeff=0.9248;MQ=85.34;MQ0=0;MQRankSum=-6.215;QD=58.47;ReadPosRankSum=3.204;VQSLOD=7.0438;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,29:33:78.22:1717,78,0	0/0:9,0:9:27.08:0,27,412	0/0:29,0:29:75.16:0,75,1125	0/0:20,0:20:48.16:0,48,778	0/0:34,0:34:99:0,102,1631	0/0:44,0:44:99:0,126,2087	0/0:20,0:20:60.19:0,60,975	1/1:4,20:24:69.24:1544,69,0	0/0:22,0:22:60.21:0,60,999	1/1:0,29:31:93.27:1972,93,0	1/1:4,28:33:93.15:1853,93,0	1/1:5,20:25:60.21:1342,60,0	1/1:2,20:22:66.23:1468,66,0	1/1:0,22:23:63.22:1428,63,0	0/0:26,0:26:78.26:0,78,1274	0/1:1,15:17:1.82:972,0,2	1/1:2,20:24:54.18:1224,54,0	1/1:0,10:10:27.09:612,27,0	1/1:4,22:26:75.26:1670,75,0	1/1:1,26:27:81.23:1757,81,0	1/1:4,18:23:51.17:1135,51,0	1/1:4,24:29:81.28:1777,81,0	1/1:2,15:17:42.10:904,42,0	1/1:2,22:24:4.20:1106,4,0	1/1:2,17:18:51.18:1139,51,0	1/1:1,27:29:87.30:1924,87,0	1/1:4,26:33:81.28:1822,81,0	1/1:0,8:8:24.08:528,24,0
chr10	32117994	.	A	AT	2583.36	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-10.844;DP=592;FS=13.334;HRun=6;HaplotypeScore=54.8499;InbreedingCoeff=0.9970;MQ=77.84;MQ0=0;MQRankSum=-1.649;QD=30.75;ReadPosRankSum=3.078;VQSLOD=3.2404;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,99,1001	1/1:0,6:6:18.06:226,18,0	0/0:23,0:23:50.22:0,50,544	0/0:17,0:17:36.07:0,36,364	1/1:2,24:26:66.17:812,66,0	1/1:1,19:20:54.17:679,54,0	1/1:1,13:14:42.13:526,42,0	0/0:30,0:29:72.14:0,72,724	1/1:4,14:18:42.12:514,42,0	0/0:31,0:31:84.18:0,84,853	0/0:23,0:23:63.07:0,63,629	0/0:12,0:12:33.07:0,33,337	0/0:20,0:20:54.08:0,54,532	0/0:25,0:25:66.11:0,66,655	0/0:24,0:24:63.12:0,63,632	0/0:21,1:22:22.38:0,22,537	0/0:12,0:12:33.07:0,33,334	0/0:17,0:17:48.07:0,48,479	0/0:18,0:18:42.07:0,42,418	0/0:35,0:35:93.21:0,93,948	0/0:16,0:16:48.09:0,48,482	0/0:24,0:24:72.15:0,72,726	0/0:28,0:28:78.16:0,78,788	0/0:17,0:17:51.12:0,51,520	0/0:22,0:22:63.10:0,63,631	0/0:23,0:23:63.14:0,63,642	0/0:26,0:26:69.13:0,69,696	0/0:9,0:9:27.06:0,27,275
chr10	32118413	.	GGGACAATTGAGATA	G	24793.17	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=19.067;DP=624;FS=9.806;HRun=0;HaplotypeScore=252.1919;InbreedingCoeff=0.9770;MQ=80.60;MQ0=0;MQRankSum=-18.468;QD=83.20;ReadPosRankSum=5.132;VQSLOD=3.0978;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,16:24:27.09:1019,27,0	0/0:13,0:13:36.12:0,36,2500	0/0:23,0:23:57.20:0,57,3136	0/0:19,0:19:54.16:0,54,2714	0/0:43,0:43:99:0,126,7786	0/0:26,0:26:78.27:0,78,5188	0/0:19,0:19:54.16:0,54,3357	0/0:20,0:20:60.19:0,60,3660	0/0:27,0:27:75.26:0,75,4773	1/1:4,20:24:57.19:2335,57,0	1/1:2,17:19:48.16:1999,48,0	1/1:5,20:25:54.19:2249,54,0	1/1:3,22:25:57.20:2374,57,0	1/1:7,17:24:45.15:1834,45,0	0/0:36,0:36:99:0,105,6925	1/1:2,26:28:60.21:2500,60,0	1/1:3,8:11:15.05:618,15,0	1/1:4,3:7:6.02:250,6,0	0/0:23,0:23:66.22:0,66,3730	0/0:33,0:33:93.32:0,93,6079	0/0:18,0:18:54.19:0,54,3408	1/1:2,22:24:66.18:2558,66,0	1/1:3,22:25:57.20:2234,57,0	1/1:4,11:15:15.15:622,15,0	1/1:0,17:17:39.13:1625,39,0	1/1:6,18:24:54.17:2076,54,0	0/0:26,0:26:72.25:0,72,4567	1/1:1,5:6:12.04:500,12,0
chr10	32118909	.	CA	C	11162.38	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=13.324;DP=551;FS=0.000;HRun=7;HaplotypeScore=67.1535;InbreedingCoeff=0.9942;MQ=74.00;MQ0=0;MQRankSum=-2.368;QD=27.16;ReadPosRankSum=1.114;VQSLOD=5.4944;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,14:17:45.07:450,45,0	0/0:16,0:16:48.15:0,48,603	0/0:11,0:11:28.33:0,28,343	0/0:8,0:8:12.02:0,12,133	0/0:37,0:37:99:0,99,1219	0/0:16,0:16:45.13:0,45,553	0/0:18,0:18:45.12:0,45,551	1/1:4,25:29:75.13:750,75,0	0/0:15,0:15:45.14:0,45,566	1/1:6,12:18:45.08:450,45,0	1/1:2,26:28:66.14:673,66,0	1/1:0,17:17:48.11:490,48,0	1/1:2,25:27:60.14:612,60,0	1/1:0,15:15:39.09:398,39,0	0/0:19,0:19:57.18:0,57,717	1/1:0,15:15:45.10:459,45,0	1/1:1,19:20:51.12:520,51,0	1/1:1,12:13:36.08:367,36,0	1/1:1,18:19:54.12:551,54,0	1/1:3,33:36:96.21:980,96,0	1/1:0,10:10:30.07:306,30,0	1/1:3,19:22:57.13:582,57,0	1/1:1,36:37:99:1041,102,0	1/1:0,8:8:24.05:245,24,0	1/1:1,17:18:45.10:459,45,0	1/1:1,19:20:57.11:575,57,0	1/1:1,18:19:54.12:551,54,0	1/1:0,23:23:69.16:704,69,0
chr10	32118999	.	CT	C	6640.21	PASS	AB=0.906;AC=32;AF=0.571;AN=56;BaseQRankSum=16.056;DP=610;FS=0.322;HRun=10;HaplotypeScore=83.9184;InbreedingCoeff=0.8487;MQ=71.94;MQ0=0;MQRankSum=-0.587;QD=18.81;ReadPosRankSum=1.511;VQSLOD=5.4898;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,26:28:65.98:573,66,0	0/0:18,0:18:51.14:0,51,564	0/1:19,2:15:25.93:26,0,91	0/1:15,1:15:3.36:3,0,132	0/0:26,0:26:72.14:0,72,782	0/0:22,0:22:66.17:0,66,722	0/0:17,0:17:51.13:0,51,556	0/0:29,0:29:62.73:0,63,662	0/0:21,0:21:60.15:0,60,655	1/1:2,23:25:65.98:573,66,0	1/1:8,18:26:65.96:568,66,0	1/1:1,17:18:46.81:396,47,0	1/1:9,19:27:53.99:472,54,0	1/1:7,10:17:35.99:312,36,0	0/0:28,2:30:32.17:0,32,802	1/1:3,25:28:68.85:599,69,0	1/1:3,11:14:38.99:339,39,0	1/1:1,6:7:14.99:130,15,0	0/0:17,0:17:16.14:0,16,405	0/0:31,0:31:81.21:0,81,888	0/0:18,0:18:54.13:0,54,589	1/1:2,24:26:71.98:625,72,0	1/1:9,19:28:59.96:521,60,0	1/1:2,11:13:2.82:253,3,0	1/1:4,16:20:53.99:469,54,0	1/1:4,20:24:68.98:599,69,0	0/0:28,0:26:78.21:0,78,861	1/1:5,7:12:20.99:182,21,0
chr10	32119060	.	TC	T	302.82	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.343;DP=652;FS=1.986;HRun=2;HaplotypeScore=79.8247;InbreedingCoeff=0.9954;MQ=81.78;MQ0=0;MQRankSum=-6.259;QD=13.76;ReadPosRankSum=1.833;VQSLOD=3.0640;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,141,2111	0/0:10,0:10:30.10:0,30,450	0/0:22,0:22:61.80:0,62,890	0/0:29,0:29:79.81:0,80,1109	0/0:24,0:24:72.24:0,72,1074	0/0:17,0:17:51.17:0,51,764	0/0:15,0:15:45.14:0,45,656	0/0:27,0:27:78.26:0,78,1144	0/0:27,0:27:81.27:0,81,1214	0/0:26,0:26:75.25:0,75,1110	0/0:18,0:18:54.18:0,54,808	0/0:29,0:29:81.26:0,81,1193	1/1:5,17:21:53.64:398,54,0	0/0:20,0:20:57.19:0,57,854	0/0:36,0:36:99:0,108,1601	0/0:25,0:25:72.24:0,72,1079	0/0:19,0:19:57.15:0,57,828	0/0:8,0:8:21.07:0,21,315	0/0:15,0:15:45.14:0,45,655	0/0:27,0:27:81.26:0,81,1192	0/0:28,0:28:81.26:0,81,1194	0/0:18,0:18:54.18:0,54,809	0/0:23,0:23:69.22:0,69,1013	0/0:17,0:17:51.17:0,51,764	0/0:30,0:30:90.30:0,90,1329	0/0:27,0:27:78.26:0,78,1169	0/0:31,0:29:93.30:0,93,1370	0/0:13,0:13:39.13:0,39,582
chr10	32119066	.	A	AG	32.27	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.945;DP=648;FS=2.069;HRun=0;HaplotypeScore=79.0971;InbreedingCoeff=0.9951;MQ=81.77;MQ0=0;MQRankSum=-6.179;QD=1.90;ReadPosRankSum=2.131;VQSLOD=1.9123;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,147,2023	0/0:12,0:12:33.11:0,33,462	0/0:23,0:23:46.68:0,47,853	0/0:26,0:26:72.18:0,72,930	0/0:24,0:24:72.24:0,72,1006	0/0:18,0:18:54.18:0,54,754	0/0:14,0:14:42.14:0,42,586	0/0:25,0:25:72.23:0,72,992	0/0:28,0:28:84.28:0,84,1173	0/0:26,0:26:72.23:0,72,975	0/0:21,0:21:60.17:0,60,805	0/0:31,0:31:81.25:0,81,1113	1/1:0,17:17:36.52:127,37,0	0/0:19,0:19:57.19:0,57,797	0/0:33,0:33:99:0,99,1384	0/0:29,0:29:78.25:0,78,1073	0/0:21,0:21:63.21:0,63,878	0/0:7,0:7:21.07:0,21,294	0/0:15,0:15:45.14:0,45,611	0/0:27,0:27:72.24:0,72,997	0/0:31,0:31:87.26:0,87,1196	0/0:16,0:16:48.16:0,48,671	0/0:21,0:21:63.20:0,63,861	0/0:18,0:18:54.10:0,54,696	0/0:28,0:28:84.25:0,84,1136	0/0:27,0:27:78.25:0,78,1076	0/0:30,0:29:90.30:0,90,1259	0/0:10,0:10:30.10:0,30,420
chr10	32119067	.	T	TCAA	1057.98	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.248;DP=654;FS=0.885;HRun=0;HaplotypeScore=106.1904;InbreedingCoeff=0.9952;MQ=81.37;MQ0=0;MQRankSum=-6.776;QD=50.38;ReadPosRankSum=1.739;VQSLOD=5.9912;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,144,2568	0/0:12,0:12:36.11:0,36,639	0/0:23,0:23:67.77:0,68,1182	0/0:25,0:25:61.74:0,62,1111	0/0:26,0:26:72.25:0,72,1334	0/0:18,0:18:54.19:0,54,997	0/0:14,0:14:42.13:0,42,752	0/0:27,0:27:72.23:0,72,1307	0/0:28,0:28:84.27:0,84,1528	0/0:25,0:25:69.23:0,69,1241	0/0:21,0:21:57.18:0,57,1004	0/0:31,0:31:87.24:0,87,1498	1/1:4,17:21:57.13:1153,57,0	0/0:19,0:19:57.20:0,57,1060	0/0:33,0:33:99:0,99,1846	0/0:30,0:30:84.24:0,84,1465	0/0:21,0:21:63.22:0,63,1153	0/0:8,0:8:21.01:0,21,391	0/0:15,0:15:45.14:0,45,782	0/0:27,0:27:72.23:0,72,1289	0/0:33,0:33:87.75:0,88,1565	0/0:17,0:17:48.16:0,48,895	0/0:20,0:20:60.19:0,60,1076	0/0:15,0:15:45.15:0,45,830	0/0:27,0:27:78.24:0,78,1391	0/0:27,0:27:78.25:0,78,1422	0/0:31,0:30:90.31:0,90,1677	0/0:10,0:10:30.10:0,30,559
chr10	32119487	.	C	CGTGTGT	2860.42	PASS	AB=0.900;AC=30;AF=0.625;AN=48;BaseQRankSum=-4.274;DP=599;FS=1.636;HRun=0;HaplotypeScore=156.7960;InbreedingCoeff=0.6912;MQ=65.29;MQ0=9;MQRankSum=-0.441;QD=8.22;ReadPosRankSum=-3.464;VQSLOD=2.1422;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:34:9.03:150,9,0	0/0:6,0:7:3.01:0,3,42	./.	./.	0/0:10,0:14:7.84:0,8,89	./.	0/0:16,0:22:9.03:0,9,126	./.	0/0:8,0:27:42.13:0,42,572	1/1:23,0:23:17.65:239,18,0	1/1:6,0:12:4.94:54,5,0	1/1:20,0:20:8.12:366,8,0	1/1:12,8:21:12.51:271,13,0	1/1:15,0:21:6.02:134,6,0	0/0:19,0:19:27.08:0,27,513	1/1:17,8:32:14.80:438,15,0	1/1:17,0:28:5.77:76,6,0	1/1:11,4:15:18.05:467,18,0	0/0:11,0:14:3.01:0,3,42	0/0:8,0:15:15.04:0,15,170	0/1:27,0:33:0:0,0,0	1/1:14,0:14:12.01:163,12,0	1/1:5,7:12:3.48:97,3,0	1/1:8,1:21:6.40:135,6,0	0/1:18,5:23:0.03:0,0,0	1/1:18,0:25:26.55:398,27,0	0/0:13,0:31:27.09:0,27,377	1/1:7,0:8:3.01:39,3,0
chr10	32120079	.	A	ACTTT	8767.50	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-8.968;DP=392;FS=9.764;HRun=0;HaplotypeScore=63.2566;InbreedingCoeff=0.9413;MQ=60.76;MQ0=4;MQRankSum=-3.518;QD=40.22;ReadPosRankSum=4.299;VQSLOD=4.1858;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,12:17:15.05:349,15,0	0/0:5,0:5:12.02:0,12,163	0/0:14,0:10:25.15:0,25,237	0/0:5,0:2:2.97:0,3,20	0/0:26,0:25:68.92:0,69,956	0/0:14,0:14:42.13:0,42,698	0/0:13,0:13:36.09:0,36,599	0/0:17,0:17:39.92:0,40,315	0/0:9,0:9:27.06:0,27,465	1/1:2,20:21:63.10:1185,63,0	1/1:1,12:13:23.84:419,24,0	1/1:0,12:12:21.07:514,21,0	1/1:1,11:13:18.06:427,18,0	1/1:2,15:17:30.10:721,30,0	0/0:12,0:11:33.11:0,33,570	1/1:4,11:16:30.10:658,30,0	1/1:2,7:9:21.07:479,21,0	1/1:5,9:15:23.66:464,24,0	0/0:9,0:9:20.92:0,21,194	0/0:23,0:23:39.83:0,40,374	0/0:12,0:12:28.73:0,29,273	1/1:2,12:13:18.06:440,18,0	1/1:1,17:18:23.96:567,24,0	1/1:0,4:4:3.48:75,3,0	1/1:2,8:11:21.07:512,21,0	1/1:2,21:22:66.13:1312,66,0	0/0:15,0:15:40.32:0,40,323	1/1:2,12:14:27.09:646,27,0
chr10	32120080	.	C	CT	2879.72	PASS	AB=0.748;AC=39;AF=0.722;AN=54;BaseQRankSum=5.133;DP=397;FS=5.135;HRun=12;HaplotypeScore=67.0708;InbreedingCoeff=0.6175;MQ=58.63;MQ0=8;MQRankSum=-3.218;QD=8.89;ReadPosRankSum=3.482;VQSLOD=2.8493;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:17:14.20:69,14,0	0/0:5,0:5:5.95:0,6,44	0/0:14,0:9:1.33:0,1,55	./.	0/1:25,2:26:7.86:8,0,276	0/0:14,0:15:34.82:0,35,247	0/0:12,1:13:3.61:0,4,189	1/1:6,13:19:20.09:318,20,0	0/0:10,0:9:23.85:0,24,175	1/1:21,0:21:43.10:206,43,0	1/1:13,0:13:14.20:68,14,0	1/1:11,0:11:19.89:95,20,0	1/1:12,0:13:17.04:82,17,0	1/1:17,0:17:28.41:137,28,0	0/0:12,0:11:29.83:0,30,219	1/1:14,0:16:20.37:116,20,0	1/1:9,0:9:19.79:94,20,0	1/1:16,0:16:17.82:103,18,0	0/1:4,4:8:6.82:102,0,7	1/1:3,20:24:56.51:516,57,0	0/1:5,6:10:19.77:151,0,20	1/1:12,0:12:17.04:82,17,0	1/1:18,0:18:22.68:112,23,0	1/1:5,0:5:5.22:31,5,0	1/1:10,0:11:19.89:95,20,0	1/1:22,0:22:48.46:245,48,0	1/1:2,12:15:16.96:303,17,0	1/1:15,0:14:25.57:123,26,0
chr10	32126007	.	C	CA	5362.13	PASS	AB=0.601;AC=47;AF=0.839;AN=56;BaseQRankSum=-0.654;DP=570;FS=1.502;HRun=12;HaplotypeScore=94.9612;InbreedingCoeff=0.5545;MQ=73.94;MQ0=0;MQRankSum=-2.183;QD=10.21;ReadPosRankSum=-0.006;VQSLOD=4.3581;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,27:30:54.09:525,54,0	1/1:0,1:6:11.53:72,12,0	0/0:12,0:11:11.81:0,12,79	0/0:10,0:13:11.68:0,12,60	1/1:6,1:22:39.15:238,39,0	1/1:4,2:27:40.05:219,40,0	1/1:10,0:24:27.04:141,27,0	1/1:12,2:33:48.47:282,48,0	1/1:5,0:18:17.63:91,18,0	1/1:18,7:26:25.68:216,26,0	0/1:8,14:22:10.27:231,0,10	1/1:15,5:21:12.19:241,12,0	0/1:4,11:15:9.89:76,0,10	0/1:6,10:16:3.41:128,0,3	0/0:20,0:20:34.85:0,35,261	1/1:6,16:22:5.13:212,5,0	1/1:6,18:24:14.10:285,14,0	1/1:2,15:18:8.45:226,8,0	1/1:10,1:26:39.45:211,39,0	1/1:8,1:29:51.87:288,52,0	1/1:4,2:17:17.21:100,17,0	1/1:6,17:23:17.53:310,18,0	1/1:4,12:17:24.05:215,24,0	1/1:2,21:23:30.05:292,30,0	1/1:5,13:18:8.09:231,8,0	1/1:11,11:22:29.98:275,30,0	1/1:5,2:21:24.84:139,25,0	1/1:0,5:5:12.02:117,12,0
chr10	32126280	.	AGTGTGTGTGTGT	A	292.95	PASS	AC=6;AF=0.115;AN=52;BaseQRankSum=3.034;DP=519;FS=0.000;HRun=0;HaplotypeScore=154.3350;InbreedingCoeff=0.6409;MQ=74.32;MQ0=13;MQRankSum=-2.218;QD=6.98;ReadPosRankSum=1.686;VQSLOD=2.4841;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:18.04:0,18,333	1/1:3,2:5:3.01:102,3,0	./.	./.	0/0:10,0:15:12.02:0,12,130	1/1:13,5:18:5.35:203,5,0	0/0:28,6:34:0.24:0,0,0	0/0:21,0:21:6.60:0,7,67	1/1:18,0:18:6.02:99,6,0	0/0:11,0:10:15.03:0,15,427	0/0:11,0:11:12.04:0,12,635	0/0:12,0:13:12.50:0,12,280	0/0:18,0:17:21.52:0,22,815	0/0:17,0:17:24.06:0,24,597	0/0:21,0:20:27.06:0,27,1061	0/0:13,0:14:21.07:0,21,752	0/0:27,0:28:13.29:0,13,204	0/0:14,0:13:21.07:0,21,726	0/0:19,0:18:19.88:0,20,611	0/0:14,0:15:27.56:0,28,1135	0/0:42,0:39:30.09:0,30,1206	0/0:11,0:11:15.05:0,15,698	0/0:14,0:13:3.01:0,3,118	0/0:24,0:24:24.07:0,24,766	0/0:8,0:8:9.50:0,10,322	0/0:23,0:21:21.07:0,21,899	0/0:6,0:5:6.02:0,6,141	0/0:9,0:7:15.05:0,15,681
chr10	32127999	.	GAACAGATTGACGAAGGAACGGA	G	37691.34	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=16.889;DP=665;FS=8.326;HRun=0;HaplotypeScore=416.3164;InbreedingCoeff=0.9736;MQ=83.88;MQ0=0;MQRankSum=-16.885;QD=86.45;ReadPosRankSum=8.497;VQSLOD=3.0605;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,15:29:27.09:1583,27,0	0/0:17,0:17:45.15:0,45,4027	0/0:24,0:24:63.20:0,63,3962	0/0:32,0:33:74.55:0,75,3775	0/0:40,0:40:99:0,108,9883	0/0:24,0:24:69.24:0,69,6171	0/0:29,0:29:84.29:0,84,6903	1/1:14,0:14:12.02:196,12,0	0/0:32,0:32:93.31:0,93,7475	1/1:12,13:25:35.95:1911,36,0	1/1:5,9:14:21.07:1117,21,0	1/1:8,20:28:48.16:2727,48,0	1/1:12,20:32:57.20:3403,57,0	1/1:6,30:36:69.24:4121,69,0	0/0:30,0:30:84.29:0,84,8476	1/1:10,25:35:66.23:3942,66,0	1/1:10,6:16:12.04:686,12,0	1/1:5,8:13:18.06:1075,18,0	1/1:8,5:13:15.05:773,15,0	1/1:10,12:22:33.11:1971,33,0	1/1:4,6:10:9.03:479,9,0	1/1:11,14:25:27.09:1612,27,0	1/1:6,12:18:30.02:1760,30,0	1/1:15,11:26:21.18:843,21,0	1/1:5,10:15:27.09:1612,27,0	1/1:11,17:28:51.18:3045,51,0	1/1:3,24:27:60.02:3582,60,0	1/1:3,7:10:21.07:1254,21,0
chr10	32128609	.	T	TA	10744.09	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=2.437;DP=461;FS=8.652;HRun=9;HaplotypeScore=73.1445;InbreedingCoeff=0.9263;MQ=77.39;MQ0=0;MQRankSum=-2.829;QD=25.64;ReadPosRankSum=1.336;VQSLOD=5.3449;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,14:17:39.11:431,39,0	1/1:0,5:5:15.04:166,15,0	0/0:8,0:8:17.46:0,17,130	0/0:11,0:12:13.42:0,13,128	1/1:4,19:23:51.01:524,51,0	1/1:3,17:20:48.13:531,48,0	1/1:3,9:12:24.06:266,24,0	1/1:9,20:29:57.11:604,57,0	1/1:0,17:17:42.11:465,42,0	1/1:6,13:19:36.07:382,36,0	1/1:3,13:16:36.10:398,36,0	1/1:1,10:11:27.07:299,27,0	1/1:4,14:18:45.12:497,45,0	1/1:3,6:10:17.88:180,18,0	0/0:22,0:22:65.99:0,66,573	1/1:2,16:18:39.11:431,39,0	1/1:7,28:35:78.21:863,78,0	1/1:1,22:23:63.17:697,63,0	1/1:3,16:19:48.10:519,48,0	1/1:2,12:14:36.10:398,36,0	1/1:0,9:9:27.07:299,27,0	1/1:2,7:9:18.05:199,18,0	1/1:3,11:14:4.13:273,4,0	1/1:2,11:13:33.09:365,33,0	1/1:1,15:16:39.04:416,39,0	1/1:0,17:17:51.14:564,51,0	1/1:3,19:23:53.98:579,54,0	1/1:0,12:12:36.10:398,36,0
chr10	32128895	.	T	TACACAC	1674.46	PASS	AB=0.938;AC=38;AF=0.826;AN=46;BaseQRankSum=2.952;DP=181;FS=0.000;HRun=0;HaplotypeScore=80.3357;InbreedingCoeff=0.3870;MQ=45.67;MQ0=2;MQRankSum=-3.305;QD=12.05;ReadPosRankSum=-2.054;VQSLOD=1.6069;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:6,1:6:0:0,0,0	1/1:3,0:3:2.22:7,2,0	./.	./.	1/1:4,0:4:2.44:10,2,0	1/1:5,0:5:0.47:2,0,0	0/0:2,0:2:2.50:0,2,9	1/1:19,0:19:3.01:52,3,0	0/0:2,0:2:2.50:0,2,9	1/1:4,1:5:9.03:167,9,0	0/1:5,0:5:0:0,0,0	1/1:5,2:7:6.02:108,6,0	1/1:7,3:10:14.91:209,15,0	1/1:0,7:8:6.02:194,6,0	0/0:6,0:6:15.05:0,15,319	1/1:3,9:12:0.47:1,0,0	1/1:17,3:20:17.71:309,18,0	1/1:4,0:4:6.02:117,6,0	./.	1/1:1,0:1:2.37:8,2,0	./.	1/1:2,0:2:2.94:18,3,0	1/1:3,1:4:1.86:6,2,0	./.	1/1:6,0:6:3.01:30,3,0	1/1:8,3:11:21.04:447,21,0	1/1:2,0:3:3.01:58,3,0	1/1:3,0:3:2.99:40,3,0
chr10	32128924	.	A	ATATATGTGTGTGTG	5128.59	PASS	AB=0.833;AC=23;AF=0.676;AN=34;BaseQRankSum=3.039;DP=122;FS=29.785;HRun=0;HaplotypeScore=64.4703;InbreedingCoeff=0.3768;MQ=66.38;MQ0=0;MQRankSum=-2.834;QD=65.75;ReadPosRankSum=2.392;VQSLOD=2.4733;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:7,0:5:5.23:0,5,205	0/0:2,0:2:2.04:0,2,6	./.	./.	./.	0/1:11,0:11:28.32:28,0,293	./.	1/1:1,0:1:3.01:133,3,0	./.	1/1:3,1:5:2.94:18,3,0	1/1:4,3:8:12.04:804,12,0	1/1:2,2:4:6.02:423,6,0	0/0:12,0:12:18.04:0,18,635	1/1:10,1:11:15.05:1023,15,0	1/1:7,4:14:15:824,15,0	1/1:1,1:2:6.02:293,6,0	0/1:4,0:4:32.43:32,0,96	./.	0/0:5,0:5:12.04:0,12,267	./.	0/1:0,1:4:0:0,0,0	./.	./.	1/1:4,0:8:24.08:1320,24,0	1/1:4,0:4:3.01:46,3,0	1/1:0,0:2:3.01:184,3,0
chr10	32129352	.	T	TG	5405.70	PASS	AB=0.647;AC=19;AF=0.339;AN=56;BaseQRankSum=-6.933;DP=602;FS=5.487;HRun=8;HaplotypeScore=106.9683;InbreedingCoeff=0.9079;MQ=83.57;MQ0=0;MQRankSum=-2.381;QD=24.91;ReadPosRankSum=0.075;VQSLOD=4.5262;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:36:77.56:0,78,810	1/1:0,11:11:30.09:346,30,0	0/0:37,0:37:70.56:0,71,825	0/0:19,0:19:39.01:0,39,357	1/1:2,13:15:33.10:381,33,0	1/1:3,21:24:29.70:595,30,0	1/1:3,27:30:53.77:867,54,0	1/1:8,18:26:20.66:482,21,0	1/1:3,19:22:54.16:623,54,0	0/0:11,0:11:33.02:0,33,302	0/0:20,0:20:48.02:0,48,439	0/0:24,0:24:63.03:0,63,576	0/0:23,0:23:69.04:0,69,631	0/0:14,0:14:38.97:0,39,347	0/0:18,0:18:44.99:0,45,406	0/0:17,1:18:16.41:0,16,404	0/0:42,0:42:98.99:0,99,905	0/0:9,0:9:27.01:0,27,247	0/1:5,6:11:6.08:177,0,6	1/1:3,16:19:42.12:484,42,0	1/1:6,26:31:72.21:829,72,0	0/0:20,0:20:54.03:0,54,494	0/0:16,0:16:39:0,39,357	0/0:30,0:30:71.95:0,72,651	0/0:24,0:25:68.05:0,68,610	0/0:21,0:21:57.03:0,57,521	1/1:5,22:26:54.16:621,54,0	0/0:1,0:1:3:0,3,27
chr10	32129919	.	T	TA	16429.37	PASS	AB=1.000;AC=51;AF=0.911;AN=56;BaseQRankSum=-4.980;DP=569;FS=23.992;HRun=6;HaplotypeScore=61.3398;InbreedingCoeff=0.8229;MQ=79.72;MQ0=0;MQRankSum=-5.122;QD=30.54;ReadPosRankSum=2.434;VQSLOD=3.0786;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,26:32:20.03:882,20,0	1/1:1,7:8:15.05:189,15,0	0/0:10,0:10:27.04:0,27,266	0/1:16,0:16:5.80:6,0,270	1/1:3,24:27:69.18:850,69,0	1/1:4,14:18:36.12:453,36,0	1/1:1,12:13:36.12:453,36,0	1/1:6,41:47:99:1467,123,0	1/1:1,15:16:42.13:528,42,0	1/1:4,23:27:69.21:855,69,0	1/1:3,21:24:63.16:775,63,0	1/1:2,16:18:42.13:528,42,0	1/1:1,22:23:60.19:755,60,0	1/1:1,18:19:51.16:641,51,0	0/0:21,0:21:54.12:0,54,551	1/1:2,9:11:30.06:361,30,0	1/1:1,18:19:51.16:642,51,0	1/1:2,13:15:36.11:442,36,0	1/1:9,9:18:30.10:377,30,0	1/1:1,27:28:81.26:1019,81,0	1/1:1,10:11:27.09:340,27,0	1/1:1,17:18:51.16:642,51,0	1/1:0,12:12:33.11:415,33,0	1/1:2,13:15:33.11:415,33,0	1/1:2,30:32:81.26:1019,81,0	1/1:2,26:28:78.25:980,78,0	1/1:3,31:34:87.28:1094,87,0	1/1:1,8:9:24.06:302,24,0
chr10	32130089	.	GT	G	9908.18	PASS	AB=0.829;AC=41;AF=0.732;AN=56;BaseQRankSum=10.213;DP=617;FS=4.921;HRun=9;HaplotypeScore=70.3847;InbreedingCoeff=0.7114;MQ=78.58;MQ0=0;MQRankSum=-2.791;QD=20.14;ReadPosRankSum=0.104;VQSLOD=5.2902;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,21:24:51.03:466,51,0	0/0:8,0:8:24.07:0,24,277	0/1:25,1:21:23.10:23,0,321	0/1:22,0:12:11.72:12,0,96	0/0:28,0:28:84.24:0,84,959	0/0:19,0:19:54.16:0,54,623	0/0:17,0:17:51.15:0,51,589	1/1:7,31:38:93.03:847,93,0	0/0:22,0:22:57.17:0,57,658	1/1:1,21:22:63.03:576,63,0	1/1:4,22:26:63.03:577,63,0	1/1:1,15:16:42.02:384,42,0	1/1:4,13:17:39.01:357,39,0	1/1:2,23:25:63.03:577,63,0	0/0:31,0:31:84.25:0,84,969	0/1:2,19:21:12.20:410,0,12	1/1:2,20:22:54.02:494,54,0	1/1:0,14:14:36.02:329,36,0	1/1:2,22:24:63.02:577,63,0	1/1:3,23:26:66.03:604,66,0	1/1:2,12:14:27.01:247,27,0	1/1:0,18:18:48.02:439,48,0	1/1:4,16:20:45.02:412,45,0	1/1:4,24:28:72.03:659,72,0	1/1:2,14:16:42.02:384,42,0	1/1:4,27:31:81.03:737,81,0	1/1:2,35:37:84.04:769,84,0	1/1:2,3:5:2.99:27,3,0
chr10	32132469	.	CTG	C	16293.53	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=3.768;DP=722;FS=0.485;HRun=0;HaplotypeScore=96.1974;InbreedingCoeff=0.9986;MQ=74.72;MQ0=6;MQRankSum=-5.430;QD=26.07;ReadPosRankSum=5.407;VQSLOD=5.8469;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,32:38:72.01:861,72,0	1/1:1,14:15:35.78:436,36,0	0/0:41,0:33:83.79:0,84,1225	0/0:29,0:27:41.12:0,41,621	1/1:5,30:35:72.08:845,72,0	1/1:2,19:21:51.16:649,51,0	1/1:5,23:28:51.16:649,51,0	1/1:5,15:20:45.14:570,45,0	1/1:5,18:23:42.13:534,42,0	1/1:4,21:25:63.14:755,63,0	1/1:1,19:21:53.85:606,54,0	1/1:1,26:27:63.20:801,63,0	1/1:3,18:21:45.14:569,45,0	1/1:3,26:29:60.14:744,60,0	0/0:27,0:27:69.24:0,69,1130	1/1:1,14:15:27.09:344,27,0	1/1:10,19:29:63.16:783,63,0	1/1:3,11:14:24.08:301,24,0	1/1:8,19:27:57.11:675,57,0	1/1:7,26:33:69.06:802,69,0	1/1:4,24:28:45.14:573,45,0	1/1:2,23:25:62.99:710,63,0	1/1:1,25:26:53.72:687,54,0	1/1:3,23:26:45.10:554,45,0	1/1:2,26:28:60.19:763,60,0	1/1:2,26:27:75.22:939,75,0	1/1:3,25:28:60.19:762,60,0	1/1:2,13:15:30.10:382,30,0
chr10	32132616	.	CA	C	17174.80	PASS	AB=1.000;AC=51;AF=0.911;AN=56;BaseQRankSum=5.709;DP=552;FS=0.000;HRun=3;HaplotypeScore=56.9009;InbreedingCoeff=0.7746;MQ=75.80;MQ0=0;MQRankSum=-2.440;QD=33.88;ReadPosRankSum=0.879;VQSLOD=5.1095;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,19:19:54.17:669,54,0	1/1:0,14:14:39.12:484,39,0	0/0:16,0:16:9.85:0,10,264	0/1:5,0:5:9.07:32,0,9	1/1:0,28:28:81.25:1000,81,0	1/1:1,20:21:57.18:707,57,0	1/1:0,23:23:66.21:818,66,0	1/1:0,21:21:63.20:780,63,0	1/1:2,12:14:36.11:446,36,0	1/1:2,22:24:66.21:818,66,0	1/1:1,16:17:51.15:622,51,0	1/1:0,28:28:75.24:930,75,0	1/1:0,24:24:66.21:818,66,0	1/1:0,15:15:39.12:483,39,0	0/0:29,0:29:84.27:0,84,1193	1/1:1,15:16:42.13:521,42,0	1/1:0,21:21:60.19:744,60,0	1/1:0,9:9:24.08:297,24,0	1/1:0,29:29:84.26:1041,84,0	1/1:0,32:32:90.28:1112,90,0	1/1:0,16:16:48.15:595,48,0	1/1:0,19:19:54.17:666,54,0	1/1:2,21:23:60.12:744,60,0	1/1:1,18:19:51.16:632,51,0	1/1:2,21:23:54.17:669,54,0	1/1:3,19:22:57.16:692,57,0	1/1:0,15:15:42.13:520,42,0	1/1:0,10:10:27.08:334,27,0
chr10	32133847	.	TC	T	4129.66	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=11.291;DP=681;FS=2.789;HRun=2;HaplotypeScore=90.8274;InbreedingCoeff=0.9990;MQ=85.78;MQ0=0;MQRankSum=-2.169;QD=36.23;ReadPosRankSum=1.165;VQSLOD=4.0958;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:84.20:0,84,1230	1/1:0,14:14:39.13:506,39,0	0/0:21,0:21:56.25:0,56,808	0/0:23,0:23:63.16:0,63,880	1/1:1,24:25:72.23:929,72,0	1/1:0,22:22:60.20:779,60,0	1/1:0,26:26:72.23:935,72,0	0/0:42,0:42:99:0,120,1749	1/1:2,25:27:78.19:981,78,0	0/0:34,0:34:99:0,102,1495	0/0:25,0:25:75.25:0,75,1109	0/0:29,0:29:87.28:0,87,1283	0/0:29,0:29:87.28:0,87,1281	0/0:17,0:17:48.15:0,48,699	0/0:33,0:32:99:0,99,1464	0/0:18,0:18:54.18:0,54,808	0/0:18,0:18:45.15:0,45,673	0/0:11,0:11:33.11:0,33,494	0/0:29,0:29:84.27:0,84,1232	0/0:24,0:24:69.23:0,69,1033	0/0:23,0:23:69.23:0,69,1034	0/0:21,0:21:63.19:0,63,915	0/0:27,0:27:81.27:0,81,1212	0/0:18,0:18:54.18:0,54,808	0/0:29,0:29:84.28:0,84,1258	0/0:25,0:25:75.25:0,75,1106	0/0:34,0:34:99:0,99,1458	0/0:8,0:8:21.05:0,21,290
chr10	32134595	.	G	GA	3863.61	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-12.531;DP=562;FS=6.318;HRun=7;HaplotypeScore=51.2053;InbreedingCoeff=0.9771;MQ=88.04;MQ0=0;MQRankSum=0.362;QD=29.05;ReadPosRankSum=-2.046;VQSLOD=3.4493;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:18.02:0,18,174	0/0:7,0:7:21.03:0,21,203	0/0:25,0:25:49.62:0,50,464	0/0:15,0:15:14.16:0,14,197	0/0:49,0:49:99:0,132,1274	0/0:26,0:26:75.12:0,75,724	0/0:9,0:9:24.04:0,24,232	1/1:4,31:35:90.25:1063,90,0	0/0:18,0:18:45.07:0,45,435	0/0:22,0:22:54.08:0,54,520	0/0:22,0:22:57.07:0,57,544	0/0:20,0:20:48.07:0,48,463	0/0:14,0:14:33.04:0,33,319	0/0:17,0:17:48.08:0,48,463	0/0:18,0:18:48.08:0,48,464	0/0:19,0:19:54.09:0,54,522	0/0:23,0:23:66.07:0,66,629	0/0:16,0:16:39.06:0,39,376	1/1:4,15:19:45.14:542,45,0	1/1:3,35:38:99:1099,99,0	1/1:2,10:12:27.08:326,27,0	0/0:22,0:22:57.09:0,57,550	0/0:25,0:25:63.09:0,63,603	0/0:4,0:4:12.02:0,12,116	0/0:16,0:16:45.07:0,45,435	0/0:24,0:24:69.11:0,69,666	1/1:4,25:29:69.21:833,69,0	0/0:8,0:8:11.62:0,12,115
chr10	32135408	.	CAT	C	4626.41	PASS	AB=0.911;AC=42;AF=0.750;AN=56;BaseQRankSum=-1.635;DP=376;FS=17.595;HRun=0;HaplotypeScore=97.7864;InbreedingCoeff=0.4137;MQ=53.88;MQ0=2;MQRankSum=-5.021;QD=13.89;ReadPosRankSum=0.515;VQSLOD=3.5436;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,14:23:29.80:253,30,0	0/0:11,0:11:22.20:0,22,149	0/0:6,0:3:2.80:0,3,7	0/0:11,0:5:3:0,3,25	0/1:27,0:27:59.70:65,0,60	0/1:19,0:19:48.85:49,0,75	0/1:4,0:4:12.96:13,0,17	1/1:13,17:29:51.15:624,51,0	0/0:6,0:6:0.47:0,0,1	1/1:5,17:22:48.15:604,48,0	1/1:10,1:11:11.93:91,12,0	1/1:3,4:7:17.97:192,18,0	1/1:2,3:5:8.66:69,9,0	1/1:7,7:14:11.73:171,12,0	0/0:9,0:9:24.08:0,24,401	1/1:5,7:12:13.86:142,14,0	1/1:4,14:18:29.90:288,30,0	0/1:4,5:9:13.85:102,0,14	1/1:9,8:15:21.06:259,21,0	1/1:9,8:17:41.74:333,42,0	1/1:3,6:7:8.93:72,9,0	1/1:4,0:4:5.98:57,6,0	1/1:8,8:16:26.83:233,27,0	1/1:5,3:8:3.01:36,3,0	1/1:4,15:19:38.17:347,38,0	1/1:2,4:6:12.04:151,12,0	1/1:13,10:23:32.89:319,33,0	1/1:10,3:13:14.98:155,15,0
chr10	32135419	.	AT	A	1743	PASS	AB=0.960;AC=34;AF=0.607;AN=56;BaseQRankSum=1.052;DP=334;FS=14.884;HRun=1;HaplotypeScore=107.8486;InbreedingCoeff=0.4311;MQ=49.59;MQ0=4;MQRankSum=-5.290;QD=7.39;ReadPosRankSum=0.709;VQSLOD=-0.4047;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:18:27.65:161,28,0	0/0:12,0:12:26.93:0,27,345	0/0:11,0:4:7.32:0,7,101	0/0:9,0:2:3.01:0,3,47	0/0:22,0:22:43.35:0,43,405	0/0:18,0:18:43.59:0,44,406	0/0:7,0:7:14.05:0,14,134	0/1:24,1:23:33.27:140,0,33	0/0:5,0:5:2.94:0,3,18	1/1:19,0:18:4.86:137,5,0	1/1:8,0:8:7.26:68,7,0	1/1:8,0:8:10.32:79,10,0	0/1:4,0:4:2.98:16,0,3	1/1:10,0:10:13.03:100,13,0	0/0:14,0:14:42.11:0,42,585	1/1:9,0:9:2.31:59,2,0	1/1:15,0:14:26.33:149,26,0	0/1:7,0:7:13.64:16,0,14	0/1:12,1:11:46.77:66,0,47	1/1:11,6:17:19.93:258,20,0	1/1:9,1:8:4.99:54,5,0	0/1:3,0:3:0.82:15,0,1	1/1:11,0:11:24.31:151,24,0	1/1:7,0:6:0.36:1,0,0	1/1:18,0:18:14.09:201,14,0	1/1:5,0:4:9.42:50,9,0	0/1:17,3:20:74.99:119,0,75	1/1:8,0:8:14.54:86,15,0
chr10	32135420	.	TAA	T	2316.86	PASS	AB=1.000;AC=48;AF=0.857;AN=56;BaseQRankSum=2.718;DP=333;FS=0.000;HRun=3;HaplotypeScore=110.0574;InbreedingCoeff=0.3233;MQ=49.55;MQ0=4;MQRankSum=-1.611;QD=7.47;ReadPosRankSum=4.400;VQSLOD=0.2733;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:18:4.80:45,5,0	1/1:10,2:12:15.83:62,16,0	0/1:11,0:4:1.25:1,0,22	0/0:8,1:2:2.04:0,2,6	1/1:17,4:21:38.20:334,38,0	1/1:17,1:18:29.17:309,29,0	1/1:7,0:7:13.27:104,13,0	1/1:25,0:23:54.52:314,55,0	1/1:0,5:5:2.92:17,3,0	1/1:19,0:18:31.35:233,31,0	0/1:7,0:7:0.78:1,0,7	1/1:8,0:8:1.78:32,2,0	1/1:4,0:4:3.76:20,4,0	0/1:10,0:10:0.61:20,0,1	0/0:14,0:14:42.10:0,42,650	1/1:9,0:9:3.90:42,4,0	1/1:16,0:15:1.93:72,2,0	1/1:7,0:7:4.70:45,5,0	1/1:13,0:11:29.15:178,29,0	1/1:17,0:17:16.87:109,17,0	0/1:10,0:8:7.25:10,0,7	1/1:3,0:3:4.68:23,5,0	1/1:11,0:11:7.57:36,8,0	1/1:7,0:6:2.55:14,3,0	1/1:18,0:18:17.55:79,18,0	1/1:5,0:4:11.45:61,11,0	1/1:20,0:20:38:243,38,0	1/1:8,0:8:8.09:37,8,0
chr10	32135422	.	A	ACACAC	497.84	PASS	AB=0.864;AC=12;AF=0.214;AN=56;BaseQRankSum=4.580;DP=338;FS=15.740;HRun=0;HaplotypeScore=136.1203;InbreedingCoeff=0.1600;MQ=49.55;MQ0=4;MQRankSum=-3.351;QD=5.24;ReadPosRankSum=-1.141;VQSLOD=1.7278;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:17,2:18:36.38:87,0,36	0/0:10,0:12:21.03:0,21,445	0/0:12,0:4:8.89:0,9,159	0/0:9,0:2:3.01:0,3,49	0/0:20,0:21:41:0,41,573	0/0:17,0:19:39.02:0,39,571	0/0:4,0:7:15.05:0,15,255	0/0:25,0:23:50.04:0,50,612	0/0:5,0:5:0:0,0,0	0/0:18,0:17:36.03:0,36,562	1/1:5,2:7:5.75:77,6,0	0/0:8,0:8:7.75:0,8,131	1/1:3,1:4:4.83:64,5,0	0/1:8,3:11:81.82:132,0,82	0/0:14,0:14:42.14:0,42,905	0/1:7,1:9:56.83:57,0,73	0/1:17,0:16:36.17:36,0,96	0/1:5,1:7:52.95:53,0,59	0/0:13,0:11:17.06:0,17,303	0/0:20,0:20:18.06:0,18,227	0/0:10,0:8:5.14:0,5,41	1/1:1,2:3:5.77:41,6,0	0/0:11,0:11:0.31:0,0,92	0/0:7,0:6:1.46:0,1,5	0/1:16,1:18:97.11:97,0,169	0/0:5,0:4:11.53:0,12,138	0/0:20,0:21:36.54:0,37,470	0/0:6,0:6:3.01:0,3,33
chr10	32135426	.	T	TACACACACAC	2394.68	PASS	AB=1.000;AC=30;AF=0.556;AN=54;BaseQRankSum=-0.183;DP=341;FS=0.000;HRun=0;HaplotypeScore=158.4667;InbreedingCoeff=0.3002;MQ=46.16;MQ0=3;MQRankSum=-5.120;QD=10.93;ReadPosRankSum=-1.040;VQSLOD=2.4750;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:15:8.24:237,8,0	0/0:12,0:12:20.92:0,21,305	0/0:15,0:4:3.81:0,4,138	0/0:11,0:1:0:0,0,0	0/1:22,0:22:17.66:18,0,177	0/0:19,0:19:8.83:0,9,289	0/0:9,0:9:23.21:0,23,238	0/1:23,0:21:88.32:160,0,88	./.	0/1:17,0:16:0.13:99,0,0	1/1:4,3:7:3.01:136,3,0	0/0:6,1:7:0.94:0,1,2	1/1:4,0:4:5.93:139,6,0	1/1:10,0:10:7.37:340,7,0	0/0:16,0:16:48.15:0,48,1378	1/1:10,0:10:5.91:142,6,0	1/1:15,0:14:4.88:153,5,0	1/1:7,0:7:11.61:273,12,0	0/1:12,0:11:61.28:61,0,206	0/0:19,0:19:27.05:0,27,491	0/0:10,0:8:2.69:0,3,8	1/1:3,0:3:6.02:212,6,0	0/1:13,0:13:1.14:64,0,1	1/1:9,0:8:2.65:86,3,0	1/1:20,0:20:6.70:363,7,0	1/1:5,0:4:1.80:25,2,0	0/1:22,0:22:23.84:24,0,470	1/1:4,0:4:2.99:24,3,0
chr10	32135595	.	AC	A	5716.75	PASS	AB=0.571;AC=49;AF=0.875;AN=56;BaseQRankSum=12.530;DP=425;FS=11.230;HRun=2;HaplotypeScore=139.9168;InbreedingCoeff=0.7133;MQ=92.63;MQ0=0;MQRankSum=-13.416;QD=16.52;ReadPosRankSum=6.395;VQSLOD=3.7860;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,9:12:29.67:199,30,0	1/1:3,4:7:10:120,10,0	0/0:27,0:27:75.11:0,75,1094	0/0:23,0:23:69.20:0,69,1034	1/1:2,15:17:38.54:257,39,0	1/1:0,14:14:35.63:242,36,0	1/1:4,10:14:20.18:204,20,0	0/1:7,20:28:22.28:378,0,22	1/1:3,11:14:35.65:250,36,0	1/1:3,17:20:40.63:357,41,0	1/1:1,19:20:59.33:401,59,0	1/1:1,15:16:47.36:315,47,0	1/1:3,12:15:20.60:213,21,0	1/1:3,10:13:32.70:232,33,0	0/0:29,0:29:87.30:0,87,1388	1/1:1,9:10:20.91:174,21,0	1/1:3,6:9:4.23:105,4,0	1/1:1,3:4:8.86:63,9,0	1/1:1,12:13:17.86:215,18,0	1/1:1,17:18:47.95:321,48,0	1/1:2,7:9:20.77:140,21,0	1/1:1,9:10:14.61:140,15,0	1/1:0,10:10:26.71:181,27,0	1/1:2,5:7:11.86:79,12,0	1/1:3,18:21:44.84:355,45,0	1/1:4,14:18:26.46:305,26,0	1/1:3,23:26:56.20:451,56,0	1/1:0,1:1:2.98:21,3,0
chr10	32135597	.	ATCT	A	9520.46	PASS	AB=0.574;AC=49;AF=0.875;AN=56;BaseQRankSum=12.910;DP=427;FS=13.377;HRun=0;HaplotypeScore=143.7166;InbreedingCoeff=0.6751;MQ=93.22;MQ0=0;MQRankSum=-13.682;QD=27.44;ReadPosRankSum=6.773;VQSLOD=4.1107;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,9:12:30.09:340,30,0	1/1:1,4:5:3.19:126,3,0	0/0:27,0:27:77.29:0,77,1695	0/0:24,0:24:72.21:0,72,1623	1/1:2,15:17:39.07:425,39,0	1/1:1,14:15:36.10:410,36,0	1/1:5,10:15:21.48:353,21,0	0/1:7,20:27:24.42:651,0,24	1/1:4,10:14:36.11:417,36,0	1/1:1,17:20:42.89:627,43,0	1/1:0,19:19:57.16:642,57,0	1/1:1,15:16:45.12:504,45,0	1/1:3,12:15:24.42:385,24,0	1/1:4,10:14:36.11:425,36,0	0/0:29,0:29:87.30:0,87,2100	1/1:2,9:11:20.05:321,20,0	1/1:2,6:8:1.46:155,1,0	1/1:1,3:4:11.99:125,12,0	1/1:1,12:13:18.64:369,19,0	1/1:1,17:18:54.10:590,54,0	1/1:2,7:9:18.01:190,18,0	1/1:1,9:10:13.10:250,13,0	1/1:1,10:11:33.05:361,33,0	1/1:1,5:6:12.03:135,12,0	1/1:3,18:21:37.73:538,38,0	1/1:4,14:18:20.61:490,21,0	1/1:5,23:28:48.46:659,48,0	1/1:0,1:1:3.01:35,3,0
chr10	32137153	.	C	CTATTTATTTATT	8689.83	PASS	AB=1.000;AC=42;AF=0.875;AN=48;BaseQRankSum=-2.528;DP=310;FS=0.000;HRun=0;HaplotypeScore=98.5714;InbreedingCoeff=0.3504;MQ=61.09;MQ0=0;MQRankSum=-1.987;QD=31.48;ReadPosRankSum=-0.122;VQSLOD=4.1073;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,1:10:5.98:195,6,0	./.	0/1:5,0:4:0:0,0,0	0/0:8,0:7:3.01:0,3,53	1/1:10,4:16:17.96:628,18,0	1/1:17,0:17:9.03:447,9,0	./.	1/1:50,0:44:45.13:1569,45,0	1/1:6,1:7:3.01:175,3,0	1/1:9,0:9:6.02:275,6,0	1/1:14,1:15:6.02:350,6,0	1/1:6,1:8:6.02:252,6,0	1/1:12,0:12:3.01:157,3,0	1/1:11,1:14:3.01:175,3,0	0/0:6,0:8:2.49:0,2,7	1/1:3,2:5:9.03:509,9,0	1/1:13,6:19:19.57:758,20,0	1/1:6,2:9:12:428,12,0	1/1:14,0:14:6.02:102,6,0	1/1:3,0:3:3.01:70,3,0	./.	./.	1/1:8,2:10:9.03:458,9,0	1/1:5,0:5:6.02:350,6,0	1/1:12,0:12:9.01:313,9,0	1/1:11,5:16:21.07:1008,21,0	1/1:17,0:17:15.02:472,15,0	0/1:3,0:3:0:0,0,0
chr10	32137574	.	ATT	A	10409.35	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-7.064;DP=625;FS=2.687;HRun=9;HaplotypeScore=97.0210;InbreedingCoeff=0.9964;MQ=68.32;MQ0=4;MQRankSum=-2.991;QD=29.08;ReadPosRankSum=5.059;VQSLOD=5.0376;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,26:27:78.23:909,78,0	0/0:11,0:11:30.02:0,30,433	0/0:12,0:11:20.56:0,21,284	0/0:11,0:11:23.90:0,24,351	0/0:32,0:33:83.73:0,84,1308	0/0:21,0:21:57.19:0,57,936	0/0:14,0:14:36.11:0,36,546	0/0:6,0:31:87.06:0,87,853	0/0:18,0:18:51.17:0,51,837	1/1:3,32:34:90.24:1039,90,0	1/1:0,30:30:87.26:1014,87,0	1/1:2,19:21:51.14:594,51,0	1/1:2,25:27:54.16:629,54,0	1/1:2,21:23:57.16:664,57,0	0/0:21,0:21:63.20:0,63,1008	1/1:2,19:21:45.13:524,45,0	1/1:0,16:16:33.10:385,33,0	1/1:1,10:9:24.07:280,24,0	0/0:3,0:14:39.07:0,39,399	0/0:4,0:42:99:0,120,1181	0/0:1,0:12:33.05:0,33,320	1/1:1,15:16:45.05:494,45,0	1/1:2,32:34:87.25:1011,87,0	1/1:2,14:16:39.11:455,39,0	1/1:1,36:37:99:1154,99,0	1/1:4,32:35:93.26:1084,93,0	0/0:3,0:26:57.08:0,57,548	1/1:2,6:8:15.04:175,15,0
chr10	32137841	.	T	TGCAAAGGAA	59855.86	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-6.126;DP=759;FS=0.000;HRun=0;HaplotypeScore=175.4574;InbreedingCoeff=0.9760;MQ=83.63;MQ0=0;MQRankSum=-14.668;QD=90.69;ReadPosRankSum=2.229;VQSLOD=4.5684;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,15:28:33.11:1598,33,0	1/1:5,9:15:39.13:1663,39,0	0/0:35,0:35:98.59:0,99,2642	0/0:31,0:31:84.26:0,84,2227	1/1:4,17:23:48.16:2032,48,0	1/1:2,24:29:57.20:2638,57,0	1/1:4,15:22:45.15:1961,45,0	1/1:17,19:44:99:4368,120,0	1/1:7,21:30:63.22:2841,63,0	1/1:3,23:30:81.23:3304,81,0	1/1:5,17:27:66.05:2043,66,0	1/1:1,25:30:60.21:2721,60,0	1/1:5,28:37:72.25:3348,72,0	1/1:9,12:27:57.20:2325,57,0	0/0:33,0:33:96.31:0,96,2764	1/1:6,25:35:78.27:3631,78,0	1/1:3,7:12:18.06:764,18,0	1/1:1,4:5:12.04:460,12,0	1/1:9,13:28:81.24:2796,81,0	1/1:6,21:30:72.25:3020,72,0	1/1:4,14:24:33.02:1157,33,0	1/1:5,21:29:78.27:3072,78,0	1/1:5,18:27:60.09:2317,60,0	1/1:6,9:20:15.89:387,16,0	1/1:3,19:30:60.21:2747,60,0	1/1:7,32:41:99:4883,108,0	1/1:2,21:29:66.23:3185,66,0	1/1:4,3:7:15.05:595,15,0
chr10	32138188	.	T	TG	8562.38	PASS	AB=0.900;AC=31;AF=0.554;AN=56;BaseQRankSum=-7.034;DP=547;FS=27.954;HRun=6;HaplotypeScore=57.7464;InbreedingCoeff=0.9489;MQ=84.73;MQ0=0;MQRankSum=-1.526;QD=28.64;ReadPosRankSum=2.540;VQSLOD=3.0054;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,18:20:45.14:566,45,0	0/0:7,0:7:18.04:0,18,183	0/0:18,0:18:20.63:0,21,293	0/1:16,2:18:0.92:1,0,325	0/0:35,0:35:93.18:0,93,935	0/0:23,0:23:69.14:0,69,697	0/0:14,0:14:39.07:0,39,390	0/0:33,0:33:87.18:0,87,879	0/0:17,0:17:48.11:0,48,489	1/1:6,12:18:36.11:452,36,0	1/1:3,19:22:54.17:679,54,0	1/1:2,14:16:39.12:483,39,0	1/1:3,19:22:57.18:717,57,0	1/1:1,14:15:33.11:414,33,0	0/0:17,0:17:48.11:0,48,490	1/1:0,22:22:60.19:755,60,0	1/1:1,12:13:33.11:415,33,0	1/1:0,7:7:18.06:226,18,0	0/0:17,0:17:42.09:0,42,428	0/0:27,0:27:75.17:0,75,764	0/0:11,0:11:30.07:0,30,306	1/1:2,28:30:75.15:918,75,0	1/1:2,20:22:54.17:679,54,0	1/1:0,12:12:24.08:302,24,0	1/1:6,29:35:81.26:1014,81,0	1/1:1,23:24:69.05:828,69,0	0/0:29,0:28:72.15:0,72,728	1/1:0,3:3:9.03:113,9,0
chr10	32138387	.	AT	A	7095.76	PASS	AB=0.917;AC=31;AF=0.554;AN=56;BaseQRankSum=17.459;DP=544;FS=2.848;HRun=8;HaplotypeScore=130.7733;InbreedingCoeff=0.9404;MQ=75.50;MQ0=0;MQRankSum=-2.957;QD=24.55;ReadPosRankSum=4.470;VQSLOD=3.4999;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,16:18:44.86:434,45,0	0/0:10,0:10:30.09:0,30,362	0/0:17,0:17:42.11:0,42,477	0/1:10,1:11:2.05:2,0,229	0/0:34,0:35:99:0,99,1153	0/0:26,0:26:69.21:0,69,833	0/0:22,0:22:63.19:0,63,761	0/0:29,0:29:66.03:0,66,767	0/0:13,0:13:39.12:0,39,471	1/1:3,28:31:84.13:811,84,0	1/1:2,20:22:60.09:579,60,0	1/1:0,12:12:36.06:348,36,0	1/1:1,21:22:60.10:579,60,0	1/1:2,19:21:54.08:521,54,0	0/0:19,0:19:54.15:0,54,633	1/1:0,7:7:21.03:203,21,0	1/1:2,16:18:45.07:435,45,0	1/1:0,11:11:27.04:261,27,0	0/0:18,0:18:45.14:0,45,543	0/0:34,0:34:99:0,99,1196	0/0:11,0:11:33.10:0,33,399	1/1:2,22:24:63.10:608,63,0	1/1:4,26:30:78.12:750,78,0	1/1:1,13:14:39.06:377,39,0	1/1:3,25:28:69.11:666,69,0	1/1:1,17:18:48.08:463,48,0	0/0:21,0:21:62.22:0,62,730	1/1:0,2:2:6.01:58,6,0
chr10	32138540	.	AAAAC	A	4515.49	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=13.808;DP=631;FS=6.351;HRun=0;HaplotypeScore=123.2383;InbreedingCoeff=0.9891;MQ=63.59;MQ0=3;MQRankSum=-2.947;QD=18.97;ReadPosRankSum=0.101;VQSLOD=4.1812;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:48.77:0,49,1034	1/1:1,0:9:20.51:175,21,0	0/0:22,0:16:15.02:0,15,221	0/0:20,0:18:12.04:0,12,241	1/1:8,0:34:29.21:266,29,0	1/1:4,0:25:39.04:363,39,0	1/1:6,0:23:23.40:203,23,0	1/1:11,14:24:39.07:500,39,0	1/1:8,0:20:24.03:224,24,0	0/0:18,0:17:45.15:0,45,996	0/0:26,0:26:51.16:0,51,1171	0/0:22,0:22:45.14:0,45,988	0/0:27,0:27:54.17:0,54,1151	0/0:24,0:24:39.10:0,39,813	0/0:23,0:23:57.19:0,57,1276	0/0:20,0:20:49.05:0,49,1155	0/0:30,0:31:69.08:0,69,1432	0/0:20,0:20:45.02:0,45,936	1/1:6,13:19:38.96:514,39,0	1/1:10,28:38:84.05:1208,84,0	1/1:4,16:20:39.13:628,39,0	0/0:20,0:20:42.10:0,42,819	0/0:27,0:27:72.21:0,72,1610	0/0:21,0:21:45.13:0,45,1017	0/0:17,0:17:39.13:0,39,930	0/0:28,0:28:75.25:0,75,1736	1/1:7,18:25:27.09:435,27,0	0/0:5,0:5:15.05:0,15,360
chr10	32139703	.	C	CTA	30855.60	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-10.924;DP=665;FS=2.299;HRun=0;HaplotypeScore=73.3940;InbreedingCoeff=0.9989;MQ=86.49;MQ0=2;MQRankSum=-9.578;QD=51.68;ReadPosRankSum=5.259;VQSLOD=5.9809;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,29:28:69.24:1401,69,0	1/1:0,16:17:41.92:853,42,0	0/0:30,0:30:79.18:0,79,1205	0/0:17,0:17:39.15:0,39,600	1/1:1,26:27:69.24:1400,69,0	1/1:0,22:23:57.20:1158,57,0	1/1:0,30:30:81.28:1645,81,0	1/1:0,23:27:81.15:1407,81,0	1/1:0,19:19:45.15:914,45,0	1/1:1,26:29:81.26:1520,81,0	1/1:1,22:23:54.19:1096,54,0	1/1:3,27:30:81.28:1646,81,0	1/1:1,25:27:56.92:1156,57,0	1/1:0,28:29:81.28:1639,81,0	0/0:21,0:21:57.19:0,57,927	1/1:0,26:26:66.23:1341,66,0	1/1:0,25:25:72.25:1463,72,0	1/1:0,14:14:24.08:488,24,0	1/1:2,18:20:57.19:1082,57,0	1/1:0,34:34:99:1927,99,0	1/1:0,21:22:54.19:1097,54,0	1/1:1,22:23:60.21:1218,60,0	1/1:1,22:22:48.16:974,48,0	1/1:1,19:20:51.18:1035,51,0	1/1:1,17:18:45.15:912,45,0	1/1:0,23:23:69.22:1351,69,0	1/1:0,29:30:78.27:1585,78,0	1/1:0,9:9:27.09:548,27,0
chr10	32139947	.	AAAACAAAC	A	16604.91	PASS	AB=0.606;AC=39;AF=0.696;AN=56;BaseQRankSum=16.116;DP=669;FS=64.762;HRun=0;HaplotypeScore=206.3613;InbreedingCoeff=0.8943;MQ=55.08;MQ0=2;MQRankSum=-14.083;QD=38.00;ReadPosRankSum=2.226;VQSLOD=2.1015;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,24:32:48.16:1186,48,0	1/1:2,16:18:36.08:807,36,0	0/0:27,0:24:47.87:0,48,1532	0/0:29,0:21:41.42:0,41,1133	1/1:2,26:28:52.90:1197,53,0	1/1:3,12:13:27.09:661,27,0	1/1:7,9:16:24.08:641,24,0	0/0:31,0:31:75.26:0,75,2276	1/1:5,14:19:24.08:622,24,0	1/1:4,22:26:57.66:1278,58,0	1/1:6,26:32:42.48:1500,42,0	1/1:5,19:23:39.13:996,39,0	1/1:4,11:15:9.03:240,9,0	1/1:5,14:18:27.09:670,27,0	0/0:36,0:36:96.33:0,96,3685	1/1:9,14:23:18.06:479,18,0	1/1:5,14:18:12.04:320,12,0	0/1:7,13:20:27.81:382,0,28	0/0:23,0:18:45.14:0,45,1443	0/0:22,0:22:54.19:0,54,2134	0/0:33,0:33:90.31:0,90,3484	1/1:4,20:24:51.17:1181,51,0	1/1:5,21:26:48.16:1127,48,0	1/1:7,13:18:21.07:531,21,0	1/1:5,21:26:51.18:1275,51,0	1/1:6,20:26:51.16:1192,51,0	0/0:31,0:31:78.27:0,78,3123	1/1:2,7:9:12.04:320,12,0
chr10	32140108	.	G	GAGAGAGAGGGAGAAGGGGGT	53087.86	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=4.280;DP=675;FS=14.430;HRun=0;HaplotypeScore=318.5401;InbreedingCoeff=0.9963;MQ=69.91;MQ0=1;MQRankSum=-17.933;QD=128.54;ReadPosRankSum=1.920;VQSLOD=3.6063;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:22,2:26:60.21:3703,60,0	1/1:11,0:11:24.08:957,24,0	0/0:39,0:37:86.33:0,86,3355	0/0:45,0:41:63.20:0,63,2376	1/1:11,5:18:30.57:1340,31,0	1/1:15,5:22:54.18:3057,54,0	1/1:22,1:28:48.15:2461,48,0	0/0:34,0:34:64.05:0,64,2962	1/1:12,5:22:45.15:3500,45,0	1/1:19,4:23:54.16:3775,54,0	1/1:16,1:16:39.13:1951,39,0	1/1:15,5:26:63.22:4463,63,0	1/1:18,3:22:54.19:3777,54,0	1/1:15,1:19:42.14:2615,42,0	0/0:37,0:37:99:0,99,5003	1/1:17,4:24:45.15:3335,45,0	1/1:10,3:15:27.09:1737,27,0	1/1:10,0:10:24.06:1371,24,0	0/0:20,0:20:48.15:0,48,2103	0/0:22,0:22:57.20:0,57,2800	0/0:36,0:36:87.26:0,87,3665	1/1:20,4:25:57.19:3705,57,0	1/1:17,6:27:57.26:3017,57,0	1/1:17,2:22:30.57:1701,31,0	1/1:15,3:25:54.18:3391,54,0	1/1:12,1:15:36.12:2208,36,0	0/0:29,0:29:78.24:0,78,3749	1/1:7,1:8:15.05:1023,15,0
chr10	32140789	.	T	TTC	12792.41	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-7.463;DP=532;FS=1.048;HRun=0;HaplotypeScore=67.4476;InbreedingCoeff=0.9487;MQ=69.54;MQ0=5;MQRankSum=-1.496;QD=45.85;ReadPosRankSum=4.100;VQSLOD=5.9958;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,13:17:48.10:767,48,0	0/0:8,0:8:18.05:0,18,236	0/0:15,0:10:15.12:0,15,174	0/0:15,0:9:3.20:0,3,173	0/0:29,0:29:86.85:0,87,1207	0/0:15,0:15:42.14:0,42,635	0/0:13,0:13:36.09:0,36,488	0/0:34,0:33:89.80:0,90,1136	0/0:16,0:16:48.11:0,48,680	1/1:2,27:29:87.25:1439,87,0	1/1:2,18:20:51.16:882,51,0	1/1:3,14:17:48.15:788,48,0	1/1:1,22:23:63.20:1061,63,0	1/1:4,13:17:48.11:748,48,0	0/0:20,0:20:60.17:0,60,834	1/1:5,17:22:60.17:982,60,0	1/1:3,20:23:69.21:1149,69,0	1/1:0,4:4:12.04:194,12,0	0/0:24,0:24:65.84:0,66,736	0/0:32,0:32:93.28:0,93,1330	0/0:9,0:9:24.08:0,24,363	1/1:1,16:17:51.16:853,51,0	1/1:3,16:19:54.15:848,54,0	1/1:3,6:9:27.07:419,27,0	1/1:6,12:18:42.12:714,42,0	1/1:10,23:33:99:1607,99,0	0/0:23,0:23:68.76:0,69,904	1/1:1,10:11:4.11:343,4,0
chr10	32140856	.	AT	A	6278.87	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=14.294;DP=540;FS=2.955;HRun=9;HaplotypeScore=68.7037;InbreedingCoeff=0.9779;MQ=70.05;MQ0=0;MQRankSum=-2.880;QD=22.92;ReadPosRankSum=1.525;VQSLOD=5.8856;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,14:17:39.01:357,39,0	0/0:8,0:8:18.05:0,18,208	0/0:16,0:14:28.52:0,29,343	0/0:7,0:7:5.44:0,5,74	0/0:35,1:36:74.83:0,75,1107	0/0:24,0:24:66.20:0,66,762	0/0:14,0:14:36.11:0,36,415	0/0:27,1:28:38.73:0,39,700	0/0:16,0:16:48.13:0,48,544	1/1:4,20:24:60.03:549,60,0	1/1:3,9:12:27.01:247,27,0	1/1:3,17:20:48.02:439,48,0	1/1:8,18:26:56.99:518,57,0	1/1:2,17:19:51.03:467,51,0	0/0:22,0:22:60.16:0,60,676	1/1:2,21:23:56.64:516,57,0	1/1:4,21:25:66:598,66,0	1/1:1,8:9:26.98:240,27,0	0/0:15,0:15:33.09:0,33,373	0/0:37,2:39:47.36:0,47,1045	0/0:13,0:13:39.10:0,39,440	1/1:5,14:19:47.94:425,48,0	1/1:2,19:21:53.23:478,53,0	1/1:1,7:8:23.99:214,24,0	1/1:0,14:14:42.02:384,42,0	1/1:2,27:29:81.03:737,81,0	0/0:28,0:28:78.17:0,78,872	1/1:5,3:8:12:110,12,0
chr10	32144115	.	A	AGT	2535.17	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-4.090;DP=601;FS=17.870;HRun=0;HaplotypeScore=107.3905;InbreedingCoeff=0.8995;MQ=68.40;MQ0=19;MQRankSum=-1.210;QD=11.22;ReadPosRankSum=-4.666;VQSLOD=1.3078;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:44.97:0,45,436	1/1:7,0:7:1.36:73,1,0	0/0:33,0:23:31.25:0,31,363	0/0:47,0:29:38.07:0,38,354	1/1:20,1:19:13.75:312,14,0	1/1:25,1:24:14:234,14,0	1/1:23,0:21:44.94:504,45,0	1/1:44,0:42:86.49:709,86,0	1/1:8,17:26:4.25:36,4,0	0/0:16,0:13:36:0,36,327	0/0:11,0:11:15.02:0,15,153	0/0:28,0:27:26.91:0,27,230	0/0:27,0:26:67.59:0,68,586	0/0:17,0:16:14.98:0,15,124	0/0:24,0:24:57.38:0,57,551	0/0:21,0:21:36.54:0,37,357	0/0:12,0:12:23.77:0,24,198	0/0:8,0:8:17.92:0,18,160	1/1:12,14:25:50.83:438,51,0	1/1:12,4:16:23.77:190,24,0	1/1:15,0:13:11.95:92,12,0	0/0:10,0:10:11.57:0,12,98	0/0:10,0:10:14.26:0,14,97	0/0:32,0:32:5.45:0,5,342	0/0:18,0:18:35.50:0,35,314	0/0:25,0:25:56.58:0,57,554	1/1:22,0:18:17.51:154,18,0	0/0:12,0:11:17.99:0,18,171
chr10	32144162	.	C	CTGTGTG	1781.27	PASS	AB=0.985;AC=24;AF=0.444;AN=54;BaseQRankSum=6.434;DP=598;FS=69.917;HRun=0;HaplotypeScore=146.6108;InbreedingCoeff=-0.5176;MQ=44.89;MQ0=45;MQRankSum=-0.513;QD=3.77;ReadPosRankSum=-0.492;VQSLOD=0.0500;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:37,0:34:37.89:38,0,301	0/1:12,0:11:96.85:97,0,131	./.	0/0:6,0:2:3.01:0,3,37	0/0:21,0:18:18.03:0,18,262	0/1:28,0:24:44.10:44,0,201	0/1:27,0:24:99:116,0,368	0/1:33,0:32:60.92:61,0,768	0/1:25,0:24:57.91:58,0,109	0/1:17,6:17:99:272,0,257	0/0:19,0:18:10.48:0,10,117	0/1:28,0:28:18.14:18,0,43	0/1:24,0:21:99:278,0,182	0/0:28,0:26:2.60:0,3,29	0/0:29,0:26:7.73:0,8,955	0/1:23,0:22:99:282,0,126	0/1:22,0:21:99:103,0,203	0/1:9,0:7:28.06:28,0,38	0/1:15,0:12:30.73:31,0,170	1/1:10,0:10:2.38:71,2,0	1/1:14,0:9:1.58:16,2,0	1/1:25,0:25:2.66:25,3,0	0/0:20,0:18:3.45:0,3,23	0/1:38,0:34:35.51:36,0,736	0/1:18,0:17:15.80:16,0,60	0/1:26,0:23:99:266,0,283	0/1:23,0:19:12.79:59,0,13	0/1:10,0:9:17.46:17,0,128
chr10	32144164	.	C	CTGTGTGTG	3542.06	PASS	AB=0.907;AC=29;AF=0.518;AN=56;BaseQRankSum=0.787;DP=605;FS=31.763;HRun=0;HaplotypeScore=155.9319;InbreedingCoeff=-0.2133;MQ=45.40;MQ0=43;MQRankSum=1.014;QD=7.07;ReadPosRankSum=-0.241;VQSLOD=0.7625;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:37,0:34:37.65:104,0,38	0/1:10,0:11:66.59:173,0,67	0/0:2,0:1:2.22:0,2,7	0/0:5,0:3:6.01:0,6,82	0/0:21,0:18:11.15:0,11,133	0/1:14,0:27:81.21:81,0,105	0/1:28,0:25:99:228,0,280	0/1:31,0:30:99:172,0,343	0/1:26,0:25:37.10:134,0,37	0/1:24,0:16:99:393,0,107	0/1:9,0:20:2.08:17,0,2	1/1:10,13:28:0.93:6,1,0	1/1:24,0:21:30.92:530,31,0	0/0:12,13:29:3.08:0,3,9	0/1:29,0:26:7.30:7,0,847	1/1:22,0:21:22.77:467,23,0	0/1:14,0:23:84.43:126,0,84	1/1:9,0:7:6.46:58,6,0	0/1:17,0:14:60.33:60,0,101	1/1:10,0:10:8.54:143,9,0	1/1:13,0:9:1.80:5,2,0	0/0:13,7:26:0.06:0,0,0	0/0:7,0:18:0.94:0,1,2	0/1:38,0:34:71.74:72,0,499	0/1:11,4:18:6.02:13,0,6	1/1:27,0:24:23.53:634,24,0	0/1:22,0:18:19.90:72,0,20	0/1:9,0:8:16.46:45,0,16
chr10	32144166	.	C	CTGTGTGTGTG	5377.74	PASS	AB=1.000;AC=43;AF=0.796;AN=54;BaseQRankSum=-2.036;DP=617;FS=3.822;HRun=0;HaplotypeScore=169.9679;InbreedingCoeff=0.4089;MQ=44.59;MQ0=39;MQRankSum=-2.172;QD=10.44;ReadPosRankSum=0.540;VQSLOD=3.9655;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:25,11:36:2.95:89,3,0	1/1:11,0:11:12.04:274,12,0	0/0:2,0:1:0.47:0,0,1	0/0:5,0:3:6.02:0,6,105	1/1:16,0:20:2.92:17,3,0	0/1:30,0:26:10.46:103,0,10	1/1:33,0:30:27.47:556,27,0	1/1:30,0:29:18.06:374,18,0	1/1:24,0:24:5.14:207,5,0	1/1:25,0:18:21.07:642,21,0	./.	0/0:26,0:25:0:0,0,0	1/1:24,0:21:21.54:595,22,0	1/1:30,0:29:0.29:1,0,0	0/0:29,0:26:39.11:0,39,1001	1/1:25,0:24:21.06:573,21,0	1/1:22,1:23:9.01:181,9,0	1/1:7,0:9:6.02:93,6,0	1/1:18,0:15:7.57:115,8,0	1/1:11,0:9:9.03:216,9,0	1/1:15,0:11:0.47:1,0,0	1/1:24,0:24:2.82:24,3,0	0/0:18,0:17:0.89:0,1,2	1/1:27,11:39:5.76:187,6,0	1/1:17,0:17:2.49:22,2,0	1/1:27,0:24:43.84:920,44,0	1/1:14,9:19:5.86:115,6,0	1/1:9,0:8:3.01:73,3,0
chr10	32146276	.	T	TATCC	21476.28	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-13.712;DP=790;FS=3.304;HRun=0;HaplotypeScore=117.5963;InbreedingCoeff=0.9829;MQ=71.34;MQ0=1;MQRankSum=-1.483;QD=38.08;ReadPosRankSum=3.535;VQSLOD=5.1052;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,32:49:44.11:1287,44,0	0/0:15,0:15:36.12:0,36,592	0/0:41,0:34:39.08:0,39,554	0/0:31,0:28:32.45:0,32,503	0/0:35,0:35:81.28:0,81,1325	0/0:29,0:29:72.22:0,72,1142	0/0:23,0:23:45.15:0,45,740	1/1:21,11:38:51.09:934,51,0	0/0:18,0:18:22.79:0,23,454	1/1:7,26:36:84.26:1934,84,0	1/1:7,11:21:27.09:659,27,0	1/1:7,20:27:51.17:1246,51,0	1/1:9,21:31:57.20:1392,57,0	1/1:3,16:21:51.08:1244,51,0	0/0:34,0:34:78.27:0,78,1266	1/1:8,27:35:66.23:1614,66,0	1/1:8,9:17:34.91:753,35,0	1/1:4,14:19:6.57:706,7,0	1/1:15,8:23:27.09:586,27,0	1/1:10,28:39:78.27:1905,78,0	1/1:9,19:29:49.73:1230,50,0	1/1:7,22:31:48.16:1173,48,0	1/1:15,11:27:24.97:571,25,0	1/1:14,14:29:44.98:978,45,0	1/1:6,19:26:36.12:880,36,0	1/1:9,13:24:42.09:920,42,0	1/1:7,11:18:27.09:660,27,0	1/1:5,15:20:33.11:805,33,0
chr10	32147750	.	CAAA	C	2732.12	PASS	AB=0.547;AC=15;AF=0.268;AN=56;BaseQRankSum=2.760;DP=616;FS=2.646;HRun=13;HaplotypeScore=107.0166;InbreedingCoeff=0.5526;MQ=76.71;MQ0=1;MQRankSum=-2.531;QD=11.83;ReadPosRankSum=0.262;VQSLOD=1.8072;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:2,0:20:49.04:0,49,366	0/1:3,1:11:19.93:20,0,66	0/0:13,0:13:13.30:0,13,220	0/0:15,0:15:6.75:0,7,155	0/1:5,1:26:5.08:5,0,66	0/1:3,1:27:37.47:37,0,49	0/1:2,2:23:20.41:47,0,20	1/1:5,18:23:51.02:605,51,0	0/1:5,1:28:10.67:11,0,43	0/0:22,0:23:60.15:0,60,1057	0/0:11,0:13:35.94:0,36,624	0/0:26,0:26:66.19:0,66,1177	0/0:32,0:33:78.25:0,78,1438	0/0:28,0:32:75.20:0,75,1252	0/0:22,0:24:69.19:0,69,1188	0/0:26,0:29:78.22:0,78,1401	0/0:17,0:23:57.11:0,57,884	0/0:7,0:9:21.03:0,21,319	1/1:4,9:13:27:301,27,0	1/1:4,18:22:35.98:438,36,0	1/1:4,17:21:43.39:544,43,0	0/0:16,0:18:45.10:0,45,733	0/0:17,0:19:42.59:0,43,747	0/0:16,0:23:57.09:0,57,895	0/0:11,0:18:45.09:0,45,731	0/0:31,0:33:90.29:0,90,1632	1/1:9,27:36:75.10:910,75,0	0/0:12,0:14:42.10:0,42,738
chr10	32148472	.	A	AATTT	10724.30	PASS	AB=1.000;AC=40;AF=0.769;AN=52;BaseQRankSum=-0.188;DP=428;FS=0.561;HRun=0;HaplotypeScore=76.1719;InbreedingCoeff=0.5438;MQ=62.26;MQ0=0;MQRankSum=-1.805;QD=33.20;ReadPosRankSum=2.438;VQSLOD=4.8014;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,10:21:47.99:968,48,0	1/1:5,1:6:5.47:95,5,0	0/0:14,0:12:0.73:0,1,73	0/0:7,0:6:3.01:0,3,33	1/1:9,0:9:9.40:111,9,0	1/1:15,5:20:33.85:529,34,0	1/1:4,0:4:8.89:61,9,0	0/0:31,0:31:72.05:0,72,813	1/1:5,1:6:12:216,12,0	1/1:23,6:29:60.19:1264,60,0	1/1:17,5:22:33.05:617,33,0	1/1:9,2:11:23.99:387,24,0	1/1:11,7:18:39.10:824,39,0	1/1:5,2:7:21.04:330,21,0	0/0:20,0:20:36.12:0,36,585	1/1:8,7:15:33.07:640,33,0	1/1:17,3:20:42.04:778,42,0	1/1:3,6:9:6.02:128,6,0	0/0:25,0:25:1.23:0,1,268	0/1:14,0:14:51.59:52,0,112	./.	./.	1/1:9,5:14:27.09:586,27,0	1/1:4,5:9:6.02:127,6,0	1/1:16,10:26:51.09:990,51,0	1/1:6,17:23:45.10:855,45,0	0/1:18,0:18:72.77:73,0,126	1/1:13,9:22:57.15:1096,57,0
chr10	32148501	.	G	GTTTATTTA	4202.49	PASS	AB=1.000;AC=20;AF=0.357;AN=56;BaseQRankSum=-6.863;DP=421;FS=16.483;HRun=0;HaplotypeScore=155.4784;InbreedingCoeff=0.7282;MQ=53.80;MQ0=2;MQRankSum=-4.104;QD=26.10;ReadPosRankSum=-0.902;VQSLOD=2.4052;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:17.34:0,17,758	1/1:4,0:4:6.02:87,6,0	0/0:12,0:7:14.99:0,15,227	0/0:7,0:7:18.02:0,18,300	1/1:13,0:13:9.44:110,9,0	1/1:22,0:22:29.95:298,30,0	1/1:4,0:4:5:72,5,0	0/1:37,0:36:15.72:1037,0,16	1/1:8,0:8:15.36:166,15,0	0/0:24,0:24:14.46:0,14,636	0/0:18,0:18:18.12:0,18,499	0/0:15,0:15:36.08:0,36,625	0/0:15,0:15:10.76:0,11,333	0/0:9,0:9:17.64:0,18,288	0/0:21,0:21:53.97:0,54,1210	0/0:14,0:14:32.62:0,33,447	0/1:15,0:15:36.42:36,0,218	0/0:6,0:6:0.47:0,0,1	1/1:9,8:18:23.16:629,23,0	1/1:2,8:11:20.94:651,21,0	1/1:3,0:3:9.03:233,9,0	0/0:3,0:3:8.95:0,9,137	0/0:15,0:15:20.25:0,20,468	0/0:11,0:11:7.12:0,7,390	0/0:22,0:22:50.53:0,51,593	0/0:20,0:20:47.66:0,48,664	1/1:4,18:25:21.07:883,21,0	0/0:21,0:20:13.45:0,13,270
chr10	32148546	.	AC	A	8902.38	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=4.805;DP=440;FS=8.078;HRun=5;HaplotypeScore=81.6412;InbreedingCoeff=0.9639;MQ=76.14;MQ0=0;MQRankSum=-5.202;QD=29.97;ReadPosRankSum=5.606;VQSLOD=4.9722;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,24:29:75.21:850,75,0	1/1:0,4:4:12.03:136,12,0	0/0:22,0:20:48.22:0,48,700	0/0:16,0:16:39.08:0,39,485	1/1:0,24:24:66.11:718,66,0	1/1:3,16:19:48.14:543,48,0	1/1:0,11:11:30.04:326,30,0	0/0:25,0:25:63.16:0,63,823	1/1:0,13:13:36.10:405,36,0	1/1:0,18:18:54.15:610,54,0	1/1:5,13:18:19.14:405,19,0	1/1:1,14:15:42.12:474,42,0	1/1:1,14:15:42.12:476,42,0	1/1:1,9:10:24.07:272,24,0	0/0:18,0:18:51.17:0,51,697	1/1:0,19:19:57.16:646,57,0	1/1:1,10:11:29.96:340,30,0	1/1:2,1:3:3.01:34,3,0	0/0:18,0:18:48.16:0,48,655	0/0:9,0:9:27.09:0,27,367	0/0:10,0:10:24.08:0,24,327	1/1:0,13:13:39.07:428,39,0	1/1:2,18:20:48.10:544,48,0	1/1:0,14:14:36.10:406,36,0	1/1:3,11:14:33.09:374,33,0	1/1:1,16:17:51.14:576,51,0	0/0:25,0:24:36.12:0,36,486	1/1:0,10:10:30.09:340,30,0
chr10	32148777	.	A	ATTCCTCCTCCTCTTC	29580.34	PASS	AB=1.000;AC=49;AF=0.875;AN=56;BaseQRankSum=-4.181;DP=458;FS=10.631;HRun=0;HaplotypeScore=141.2059;InbreedingCoeff=0.6826;MQ=68.55;MQ0=3;MQRankSum=-9.301;QD=78.25;ReadPosRankSum=3.839;VQSLOD=3.8783;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:23:42.10:1489,42,0	1/1:3,0:3:3.01:203,3,0	0/0:33,0:29:53.15:0,53,1502	0/0:17,0:17:32.74:0,33,1157	1/1:16,0:16:30.10:1478,30,0	1/1:20,0:20:24.08:1626,24,0	1/1:15,0:15:12.04:813,12,0	1/1:37,0:37:84.27:3157,84,0	1/1:16,0:16:18.03:1221,18,0	1/1:16,0:16:36.10:1238,36,0	1/1:14,0:14:24.04:1148,24,0	1/1:13,0:13:18.06:936,18,0	1/1:26,0:25:30.07:1854,30,0	1/1:17,0:17:24.08:1627,24,0	0/0:30,0:30:69.24:0,69,2788	0/1:19,0:19:7.52:2020,0,8	1/1:13,0:13:15.05:863,15,0	1/1:4,0:4:6.02:250,6,0	1/1:11,0:11:27.09:1198,27,0	1/1:10,0:10:12.04:416,12,0	1/1:5,0:5:3.01:200,3,0	1/1:13,0:13:24.08:1148,24,0	1/1:10,0:10:18.06:1118,18,0	1/1:10,0:10:15.05:862,15,0	1/1:15,0:13:12.04:817,12,0	1/1:23,0:23:45.15:2104,45,0	1/1:19,0:19:21.07:1415,21,0	1/1:5,5:10:6.02:379,6,0
chr10	32148782	.	TCCTCCTCCC	T	3765.57	PASS	AB=0.945;AC=14;AF=0.250;AN=56;BaseQRankSum=-4.976;DP=439;FS=1.720;HRun=0;HaplotypeScore=162.5592;InbreedingCoeff=-0.0425;MQ=61.35;MQ0=5;MQRankSum=0.901;QD=20.58;ReadPosRankSum=-2.922;VQSLOD=2.7775;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:14,9:23:99:500,0,557	0/0:3,0:3:3.01:0,3,75	0/0:29,0:24:59.18:0,59,1987	0/0:18,0:18:41.69:0,42,1503	0/1:13,0:13:99:249,0,455	0/0:20,0:20:24.08:0,24,796	0/0:14,0:14:10.59:0,11,284	0/1:25,15:40:99:1145,0,849	0/0:13,0:13:17.84:0,18,554	0/1:16,0:16:99:509,0,255	0/1:14,0:14:99:121,0,401	0/0:12,0:12:11.63:0,12,301	0/0:24,0:23:27.04:0,27,752	0/0:16,0:16:24.08:0,24,733	0/0:28,0:28:72.25:0,72,3328	0/0:17,0:17:32.70:0,33,1048	0/0:12,0:12:9.25:0,9,417	0/1:6,0:6:6.17:6,0,264	1/1:14,0:13:18.12:563,18,0	0/1:10,0:9:81.32:141,0,81	1/1:4,0:4:2.80:13,3,0	0/1:13,0:13:99:182,0,286	0/1:10,0:10:44.58:45,0,316	0/0:10,0:11:9.03:0,9,270	0/0:11,0:10:12.04:0,12,422	0/1:20,0:20:99:292,0,586	0/0:19,0:19:20.86:0,21,675	0/0:8,0:8:6.02:0,6,234
chr10	32148786	.	C	CCTCTTCTTCCTCCTT	35851.63	PASS	AB=0.525;AC=49;AF=0.875;AN=56;BaseQRankSum=-5.010;DP=584;FS=17.151;HRun=0;HaplotypeScore=123.5004;InbreedingCoeff=0.6993;MQ=55.87;MQ0=5;MQRankSum=-9.626;QD=70.16;ReadPosRankSum=2.169;VQSLOD=3.4476;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:24:51.04:1964,51,0	1/1:0,1:3:3.01:223,3,0	0/0:25,0:21:57.39:0,57,1682	0/0:20,0:19:38.96:0,39,1309	1/1:0,9:24:36.02:1718,36,0	1/1:1,15:28:24.08:1781,24,0	1/1:0,10:18:12.04:890,12,0	1/1:38,0:38:99:3552,99,0	1/1:1,10:19:17.66:1336,18,0	1/1:1,8:20:48.14:1964,48,0	1/1:1,7:24:29.90:1291,30,0	1/1:3,6:16:18.06:1012,18,0	1/1:2,17:30:30.07:2024,30,0	1/1:1,13:21:24.08:1778,24,0	0/0:26,0:26:75.23:0,75,3012	0/1:3,12:32:8.71:2213,0,9	1/1:2,6:20:15.04:916,15,0	1/1:6,0:6:12.43:332,12,0	1/1:5,7:21:57.20:2769,57,0	1/1:1,5:14:15.02:478,15,0	1/1:0,1:7:3.01:204,3,0	1/1:1,10:22:27.05:1261,27,0	1/1:2,7:19:18.06:1225,18,0	1/1:2,4:19:15.05:953,15,0	1/1:1,6:15:12.04:892,12,0	1/1:4,11:30:74.83:3097,75,0	1/1:3,10:29:21.07:1557,21,0	1/1:7,1:8:6.02:422,6,0
chr10	32149102	.	AG	A	5194.22	PASS	AC=46;AF=0.885;AN=52;BaseQRankSum=12.745;DP=472;FS=0.000;HRun=2;HaplotypeScore=202.4770;InbreedingCoeff=0.9080;MQ=86.73;MQ0=0;MQRankSum=-12.809;QD=13.08;ReadPosRankSum=5.747;VQSLOD=4.0017;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,8:11:19.11:121,19,0	1/1:3,5:8:15.71:98,16,0	0/0:28,0:28:84.28:0,84,1244	0/0:19,0:19:49.81:0,50,702	1/1:3,24:27:53.40:352,53,0	1/1:4,17:21:50.03:306,50,0	1/1:2,7:9:20.55:134,21,0	1/1:13,18:31:60.62:402,61,0	1/1:4,10:14:29.18:187,29,0	1/1:8,18:26:59.32:379,59,0	1/1:6,11:17:19.68:150,20,0	1/1:4,13:18:34.75:251,35,0	1/1:4,17:21:57.57:357,58,0	1/1:3,11:14:32.55:232,33,0	0/0:26,0:26:78.26:0,78,1168	1/1:3,20:23:56.72:347,57,0	1/1:3,7:10:16.25:105,16,0	./.	1/1:5,8:13:24.12:144,24,0	1/1:10,18:28:22.34:245,22,0	1/1:2,2:4:5.77:34,6,0	1/1:4,12:16:19.83:175,20,0	1/1:1,9:10:27.54:163,28,0	1/1:1,2:3:5.73:34,6,0	1/1:4,11:15:37.45:204,37,0	1/1:6,21:27:60.39:389,60,0	1/1:10,21:31:67.24:383,67,0	./.
chr10	32149107	.	TCA	T	8393.78	PASS	AC=46;AF=0.885;AN=52;BaseQRankSum=12.581;DP=379;FS=7.443;HRun=0;HaplotypeScore=198.5525;InbreedingCoeff=0.9165;MQ=90.26;MQ0=0;MQRankSum=-12.831;QD=27.16;ReadPosRankSum=4.861;VQSLOD=5.2776;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,8:9:20.05:184,20,0	1/1:0,5:5:15.01:137,15,0	0/0:28,0:27:81.23:0,81,1481	0/0:15,0:15:45.02:0,45,774	1/1:0,24:24:64.81:597,65,0	1/1:1,17:18:51.04:487,51,0	1/1:0,7:7:21.04:214,21,0	1/1:1,18:19:57.02:569,57,0	1/1:0,10:10:30.05:304,30,0	1/1:1,18:19:56.87:549,57,0	1/1:0,11:11:32.95:286,33,0	1/1:2,13:15:41.93:400,42,0	1/1:1,17:18:54.04:527,54,0	1/1:0,11:11:33.07:350,33,0	0/0:27,0:27:81.28:0,81,1643	1/1:0,20:20:60.07:584,60,0	1/1:1,7:8:18.02:176,18,0	./.	1/1:2,8:10:24.03:241,24,0	1/1:4,18:22:58.28:522,58,0	1/1:0,2:2:6:58,6,0	1/1:2,12:14:35.88:333,36,0	1/1:0,9:9:27.03:268,27,0	1/1:0,2:2:6:58,6,0	1/1:1,11:12:35.61:312,36,0	1/1:1,21:22:64.94:642,65,0	1/1:1,21:22:65.66:596,66,0	./.
chr10	32149159	.	C	CACAAAGAGTGGCATACCAAGAAA	16314.68	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=1.937;DP=576;FS=8.547;HRun=0;HaplotypeScore=389.4993;InbreedingCoeff=0.9653;MQ=93.18;MQ0=0;MQRankSum=-8.089;QD=152.47;ReadPosRankSum=1.764;VQSLOD=3.4341;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:42.14:0,42,2520	1/1:5,3:8:24.08:2434,24,0	0/0:36,0:36:93.32:0,93,3778	0/0:25,0:25:60.16:0,60,2480	1/1:17,10:39:60.16:5272,60,0	1/1:15,3:24:45.15:3821,45,0	1/1:15,0:15:42.14:2661,42,0	0/0:37,0:37:93.32:0,93,4762	1/1:7,3:21:21.07:2128,21,0	0/0:32,0:32:81.28:0,81,4348	0/0:27,0:27:75.21:0,75,3689	0/0:17,0:17:48.16:0,48,2326	0/0:20,0:20:54.19:0,54,3022	0/0:17,0:17:45.08:0,45,2128	0/0:27,0:27:81.23:0,81,4034	0/0:28,0:28:72.20:0,72,3869	0/0:9,0:9:27.09:0,27,1437	0/0:6,0:6:18.06:0,18,985	0/0:20,0:20:57.20:0,57,2789	0/0:21,0:21:57.18:0,57,3170	0/0:6,0:6:15.05:0,15,702	0/0:10,0:10:30.06:0,30,1500	0/0:29,0:29:84.23:0,84,4586	0/0:5,0:5:15.05:0,15,696	0/0:19,0:19:48.16:0,48,2837	0/0:33,0:33:96.33:0,96,5020	0/0:27,0:27:78.27:0,78,4809	0/0:2,0:2:6.02:0,6,376
chr10	32149443	.	GTC	G	2484.79	PASS	AB=0.919;AC=19;AF=0.339;AN=56;BaseQRankSum=12.495;DP=734;FS=0.849;HRun=0;HaplotypeScore=108.7769;InbreedingCoeff=0.3063;MQ=63.02;MQ0=10;MQRankSum=2.116;QD=8.12;ReadPosRankSum=1.181;VQSLOD=3.4297;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:42.12:0,42,644	1/1:1,10:11:18.06:217,18,0	0/0:38,0:21:17.95:0,18,224	0/0:44,0:24:28.14:0,28,491	1/1:5,30:34:54.04:651,54,0	1/1:6,15:22:41.96:484,42,0	1/1:7,13:21:14.97:388,15,0	0/0:37,2:39:12.10:0,12,1042	1/1:4,20:25:60.01:701,60,0	0/0:36,0:36:48.07:0,48,1221	0/1:28,2:29:21.17:21,0,648	0/0:26,2:28:30.04:0,30,905	0/0:29,1:29:45.10:0,45,1189	0/0:21,1:22:23.98:0,24,800	0/1:20,2:22:45.86:46,0,594	0/1:25,3:28:33.31:33,0,954	0/1:19,2:21:36.20:36,0,442	0/1:11,2:13:12.23:12,0,227	0/1:13,2:14:42.29:42,0,331	0/0:43,1:44:63.15:0,63,1473	0/1:18,2:20:33.78:34,0,587	0/0:13,1:14:2.94:0,3,518	0/0:20,1:21:8.91:0,9,603	0/0:24,0:24:14.64:0,15,682	0/0:29,2:31:21:0,21,799	0/0:31,2:33:17.85:0,18,1210	0/1:29,2:31:0.11:0,0,962	0/1:12,0:12:0.32:0,0,455
chr10	32151780	.	T	TA	5774.87	PASS	AB=1.000;AC=37;AF=0.685;AN=54;BaseQRankSum=-5.347;DP=220;FS=4.526;HRun=2;HaplotypeScore=32.3585;InbreedingCoeff=0.7793;MQ=70.04;MQ0=0;MQRankSum=-1.668;QD=36.09;ReadPosRankSum=-0.167;VQSLOD=4.4342;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,11:13:39.10:519,39,0	0/0:1,0:1:3.01:0,3,37	0/0:6,0:5:13.58:0,14,140	0/0:8,0:5:5.91:0,6,53	0/0:9,0:9:27.08:0,27,323	0/0:13,0:13:30.05:0,30,354	0/0:10,0:10:30.08:0,30,346	1/1:0,32:32:96.28:1325,96,0	0/0:9,0:9:21.05:0,21,247	1/1:1,5:6:15.04:198,15,0	1/1:0,8:8:24:318,24,0	1/1:0,9:9:6.02:86,6,0	1/1:0,7:7:18.06:259,18,0	1/1:1,4:5:8.92:103,9,0	0/0:4,0:4:12.04:0,12,149	1/1:0,4:4:9.03:129,9,0	1/1:1,4:5:15.02:187,15,0	0/1:2,0:2:7.42:12,0,7	1/1:0,9:9:27.09:388,27,0	1/1:4,9:13:39.09:506,39,0	1/1:0,5:5:15.05:205,15,0	1/1:0,2:2:6.02:86,6,0	./.	1/1:1,0:1:2.99:24,3,0	1/1:4,12:16:45.09:604,45,0	1/1:1,10:11:30.07:394,30,0	1/1:1,7:8:18.06:259,18,0	1/1:0,4:4:12.04:172,12,0
chr10	32151817	.	TATATAC	T	719.57	PASS	AB=1.000;AC=22;AF=0.524;AN=42;BaseQRankSum=-2.202;DP=139;FS=0.000;HRun=0;HaplotypeScore=49.8171;InbreedingCoeff=0.3194;MQ=70.07;MQ0=5;MQRankSum=0.673;QD=11.07;ReadPosRankSum=-4.549;VQSLOD=0.3560;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:8,0:7:11.97:95,12,0	0/1:2,0:2:18.93:19,0,51	./.	0/0:23,0:8:3.98:0,4,31	0/0:6,0:6:8.24:0,8,38	0/0:13,0:13:15.81:0,16,64	0/0:4,0:4:5.59:0,6,34	0/1:19,0:19:99:112,0,289	0/0:8,0:8:10.70:0,11,44	1/1:2,0:2:2.98:21,3,0	1/1:2,0:2:3.01:47,3,0	./.	./.	1/1:5,0:5:5.99:50,6,0	0/0:5,0:5:9.03:0,9,255	1/1:1,0:1:3:26,3,0	1/1:5,2:7:11.44:163,11,0	0/1:3,0:3:12.08:12,0,73	0/0:2,0:2:3.01:0,3,59	0/1:2,0:2:18.94:19,0,49	./.	./.	./.	./.	1/1:5,2:7:20.69:250,21,0	1/1:1,0:1:3:27,3,0	0/0:5,0:5:7.69:0,8,116	1/1:6,0:5:5.19:27,5,0
chr10	32151821	.	TAC	T	1399.48	PASS	AB=0.950;AC=34;AF=0.810;AN=42;BaseQRankSum=-0.771;DP=134;FS=1.119;HRun=0;HaplotypeScore=37.6516;InbreedingCoeff=0.0269;MQ=70.56;MQ0=5;MQRankSum=0.922;QD=11.57;ReadPosRankSum=-1.167;VQSLOD=2.4561;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,1:8:14.96:118,15,0	0/1:2,0:2:3.94:19,0,4	./.	0/1:23,0:8:10.03:10,0,22	1/1:1,4:5:9.02:136,9,0	1/1:0,13:13:18.06:274,18,0	0/1:3,1:4:17.98:40,0,18	1/1:19,0:19:5.36:224,5,0	1/1:0,7:7:12.04:182,12,0	1/1:1,0:1:2.98:21,3,0	1/1:2,0:2:2.97:20,3,0	./.	./.	1/1:3,0:3:5.99:50,6,0	0/0:5,0:5:0.22:0,0,127	1/1:1,0:1:3:26,3,0	1/1:7,0:7:11.62:71,12,0	0/1:3,0:3:12.51:13,0,21	0/0:1,0:1:2.90:0,3,16	1/1:1,2:3:0.74:42,1,0	./.	./.	./.	./.	1/1:6,1:7:20.93:167,21,0	1/1:1,0:1:3:27,3,0	1/1:5,0:5:1.39:42,1,0	1/1:6,0:5:5.77:33,6,0
chr10	32151860	.	T	TAAGC	10106.39	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-6.777;DP=274;FS=0.000;HRun=0;HaplotypeScore=54.0677;InbreedingCoeff=0.9377;MQ=89.51;MQ0=0;MQRankSum=-9.876;QD=76.56;ReadPosRankSum=1.905;VQSLOD=6.7182;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,13:14:39.13:1128,39,0	0/0:4,0:4:12.03:0,12,216	0/0:13,0:13:36.12:0,36,720	0/0:14,0:13:30.10:0,30,543	0/0:14,0:14:42.13:0,42,823	0/0:13,0:13:27.09:0,27,551	0/0:4,0:4:12.04:0,12,237	0/0:26,0:26:75.25:0,75,1484	0/0:11,0:11:30.10:0,30,611	1/1:3,10:14:42.14:1152,42,0	1/1:1,8:10:27.09:779,27,0	1/1:2,7:11:27.09:772,27,0	1/1:1,5:6:15.05:432,15,0	1/1:3,8:11:30.10:817,30,0	0/0:13,0:13:39.13:0,39,816	1/1:2,6:8:21.07:577,21,0	1/1:0,6:7:15.05:433,15,0	1/1:0,4:4:12.04:345,12,0	0/0:5,0:5:15.05:0,15,314	0/0:11,0:11:33.11:0,33,673	0/0:2,0:2:6.02:0,6,126	1/1:3,4:8:24.08:629,24,0	1/1:1,12:13:39.13:1124,39,0	1/1:1,0:1:3.01:50,3,0	1/1:2,10:13:36.12:990,36,0	1/1:0,5:6:18.06:445,18,0	0/0:12,0:12:36.12:0,36,755	1/1:1,4:6:15.05:433,15,0
chr10	32151895	.	A	AG	3612.18	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-11.825;DP=359;FS=18.982;HRun=0;HaplotypeScore=60.6266;InbreedingCoeff=0.9486;MQ=77.95;MQ0=0;MQRankSum=2.177;QD=45.72;ReadPosRankSum=-1.932;VQSLOD=1.3207;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:48.16:0,48,671	0/0:3,0:3:9.03:0,9,126	0/0:12,0:12:36.12:0,36,502	0/0:6,0:6:15.05:0,15,209	0/0:21,0:21:63.21:0,63,881	0/0:16,0:16:36.12:0,36,504	0/0:7,0:7:21.07:0,21,294	1/1:0,35:35:99:1656,105,0	0/0:11,0:11:30.10:0,30,420	0/0:20,0:20:60.20:0,60,839	0/0:14,0:14:42.14:0,42,587	0/0:12,0:12:30.10:0,30,419	0/0:10,0:10:27.09:0,27,376	0/0:16,0:16:48.16:0,48,671	0/0:17,0:17:51.17:0,51,713	0/0:10,0:10:30.10:0,30,419	0/0:10,0:10:27.09:0,27,377	0/0:5,0:5:15.05:0,15,209	1/1:0,6:6:18.06:288,18,0	1/1:1,12:13:36.12:576,36,0	1/1:0,6:6:15.05:240,15,0	0/0:13,0:13:36.12:0,36,503	0/0:16,0:16:48.16:0,48,671	0/0:2,0:2:6.02:0,6,84	0/0:16,0:16:45.14:0,45,614	0/0:13,0:13:39.13:0,39,546	1/1:1,18:19:54.18:853,54,0	0/0:12,0:12:33.09:0,33,443
chr10	32153516	.	TA	T	17288.40	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=13.842;DP=658;FS=4.237;HRun=2;HaplotypeScore=68.1326;InbreedingCoeff=0.9985;MQ=85.98;MQ0=0;MQRankSum=-3.446;QD=36.47;ReadPosRankSum=3.088;VQSLOD=5.6298;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,28:28:75.24:974,75,0	0/0:8,0:8:24.08:0,24,360	0/0:22,0:22:65.80:0,66,927	0/0:21,0:20:54.15:0,54,776	0/0:32,0:32:93.31:0,93,1384	0/0:24,0:24:72.23:0,72,1057	0/0:25,0:25:75.24:0,75,1102	1/1:1,37:38:99:1381,111,0	0/0:24,0:24:72.24:0,72,1073	1/1:0,29:29:87.28:1128,87,0	1/1:0,23:23:66.21:857,66,0	1/1:0,31:31:93.30:1207,93,0	1/1:0,35:35:99:1284,99,0	1/1:1,31:32:90.29:1168,90,0	0/0:28,0:28:84.28:0,84,1259	1/1:0,22:22:57.18:738,57,0	1/1:0,25:25:72.23:935,72,0	1/1:0,7:7:21.07:273,21,0	1/1:1,16:17:48.16:623,48,0	1/1:1,20:21:54.18:701,54,0	1/1:0,21:21:60.20:779,60,0	1/1:0,22:22:60.20:779,60,0	1/1:0,16:16:42.14:545,42,0	1/1:1,8:9:24.08:312,24,0	1/1:1,17:18:42.14:545,42,0	1/1:0,42:42:99:1618,126,0	1/1:0,29:29:84.27:1091,84,0	1/1:0,9:9:27.09:351,27,0
chr10	32157075	.	GA	G	4804.66	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=13.447;DP=596;FS=0.332;HRun=9;HaplotypeScore=70.3162;InbreedingCoeff=0.9815;MQ=77.69;MQ0=1;MQRankSum=-4.566;QD=22.14;ReadPosRankSum=-2.230;VQSLOD=4.6848;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:33:93.06:0,93,1013	1/1:0,8:8:24.01:220,24,0	0/0:27,0:25:51:0,51,545	0/0:18,0:17:15.09:0,15,246	1/1:3,31:34:93:842,93,0	1/1:5,25:30:51.55:586,52,0	1/1:2,15:17:45.02:412,45,0	1/1:7,26:33:87.04:795,87,0	1/1:3,20:23:51.02:467,51,0	0/0:22,1:23:35.71:0,36,659	0/0:23,0:23:57.17:0,57,658	0/0:16,0:16:36.11:0,36,415	0/0:24,0:24:69.08:0,69,743	0/0:24,0:24:63.16:0,63,708	0/0:22,0:22:60.17:0,60,683	0/0:33,0:33:84.25:0,84,968	0/0:15,0:15:42.10:0,42,484	0/0:14,0:14:42.07:0,42,449	1/1:5,9:14:32.05:280,32,0	1/1:0,21:21:51.01:463,51,0	1/1:3,13:16:23.99:219,24,0	0/0:15,0:15:45.13:0,45,520	0/0:17,0:17:48.10:0,48,531	0/0:18,0:18:51.15:0,51,589	0/0:27,0:26:81.24:0,81,935	0/0:28,0:28:81.22:0,81,919	1/1:2,19:21:57.03:521,57,0	0/0:2,0:2:6.02:0,6,69
chr10	32157092	.	A	AC	2677.34	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=3.010;DP=611;FS=1.460;HRun=6;HaplotypeScore=81.6845;InbreedingCoeff=0.9733;MQ=80.44;MQ0=0;MQRankSum=-4.833;QD=23.08;ReadPosRankSum=-3.377;VQSLOD=1.9011;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:78.17:0,78,795	0/0:8,0:8:24.05:0,24,245	0/0:25,0:23:44.15:0,44,484	0/0:21,0:21:31.49:0,31,357	0/0:33,0:33:78.17:0,78,795	0/0:30,0:30:69.15:0,69,703	0/0:20,0:20:51.07:0,51,504	1/1:8,24:32:75.22:918,75,0	0/0:19,0:19:51.08:0,51,505	0/0:19,0:19:54.11:0,54,545	0/0:17,0:17:48.11:0,48,489	0/0:14,0:14:42.10:0,42,428	0/0:29,0:29:66.11:0,66,664	0/0:23,0:23:63.14:0,63,642	0/0:22,0:22:63.13:0,63,636	0/0:30,0:30:81.17:0,81,826	0/0:18,0:18:42.08:0,42,428	0/0:19,0:19:51.05:0,51,500	1/1:4,7:11:18.06:226,18,0	1/1:8,18:26:54.16:665,54,0	1/1:10,12:22:27.07:326,27,0	0/0:22,0:22:60.13:0,60,612	0/0:17,0:17:45.10:0,45,459	0/0:20,0:20:57.13:0,57,581	0/0:27,0:26:78.14:0,78,780	0/0:30,0:30:90.18:0,90,904	1/1:7,18:25:57.18:716,57,0	0/0:2,0:2:6.01:0,6,61
chr10	32159974	.	T	TATCATCATC	4492.69	PASS	AB=0.650;AC=25;AF=0.543;AN=46;BaseQRankSum=-3.815;DP=700;FS=6.873;HRun=0;HaplotypeScore=237.4493;InbreedingCoeff=0.7420;MQ=60.24;MQ0=7;MQRankSum=-5.697;QD=13.53;ReadPosRankSum=-4.250;VQSLOD=2.4520;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:23:6.02:114,6,0	0/0:13,0:13:15.93:0,16,289	./.	./.	0/0:28,0:28:39.13:0,39,850	0/0:26,0:26:42.13:0,42,926	0/0:21,0:21:15.05:0,15,283	./.	0/0:19,0:28:8.36:0,8,19	1/1:18,0:24:24.08:524,24,0	1/1:12,0:18:10.36:230,10,0	1/1:20,7:28:18.06:733,18,0	1/1:27,10:39:15.94:574,16,0	1/1:36,10:46:27.09:1181,27,0	0/0:40,0:40:33.09:0,33,821	1/1:18,0:26:18.06:309,18,0	0/1:12,0:26:17.58:18,0,80	./.	0/0:18,0:18:12.04:0,12,251	0/0:35,0:33:25.42:0,25,505	./.	1/1:15,5:22:8.82:400,9,0	1/1:12,3:17:2.81:121,3,0	1/1:23,1:24:5.21:154,5,0	1/1:17,0:23:4.58:94,5,0	1/1:11,0:13:7.17:41,7,0	0/0:30,0:30:21.80:0,22,386	0/0:2,0:8:3.74:0,4,8
chr10	32159999	.	ATC	A	167	PASS	AB=0.767;AC=3;AF=0.054;AN=56;BaseQRankSum=7.475;DP=663;FS=0.732;HRun=0;HaplotypeScore=168.4928;InbreedingCoeff=-0.0594;MQ=50.98;MQ0=15;MQRankSum=-5.414;QD=2.23;ReadPosRankSum=3.940;VQSLOD=2.3018;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:39.11:0,39,533	0/0:14,0:14:40.68:0,41,640	0/0:12,0:4:12.04:0,12,149	0/0:21,0:10:28.61:0,29,289	0/0:31,0:31:90.30:0,90,1514	0/0:26,0:25:71.82:0,72,1263	0/0:25,0:25:72.24:0,72,1087	0/0:26,0:23:51.67:0,52,574	0/0:27,0:27:75.23:0,75,1076	0/0:26,0:24:72.24:0,72,1070	0/0:19,0:19:47.10:0,47,627	0/0:28,0:28:53.82:0,54,712	0/0:40,0:40:65.73:0,66,892	0/0:39,0:39:81.25:0,81,1087	0/0:32,0:31:93.31:0,93,1513	0/0:27,0:27:57.17:0,57,763	0/0:23,0:23:51.17:0,51,725	0/0:9,0:9:21.07:0,21,269	0/1:10,4:13:39.73:40,0,220	0/1:30,9:36:99:134,0,247	0/0:14,0:14:11.30:0,11,118	0/0:27,0:24:41.77:0,42,530	0/0:21,0:19:35.55:0,36,491	0/0:24,0:24:47.67:0,48,648	0/0:24,0:24:51.17:0,51,712	0/0:18,0:17:51.17:0,51,786	0/1:13,9:22:93.18:93,0,133	0/0:15,0:15:36.12:0,36,475
chr10	32160002	.	ATCATCATCATCATCAT	A	2441.29	PASS	AB=0.763;AC=3;AF=0.054;AN=56;BaseQRankSum=7.746;DP=657;FS=4.615;HRun=0;HaplotypeScore=308.0290;InbreedingCoeff=-0.0683;MQ=50.69;MQ0=15;MQRankSum=-8.500;QD=32.12;ReadPosRankSum=2.264;VQSLOD=2.2682;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:36.12:0,36,1489	0/0:14,0:14:42.11:0,42,2020	0/0:9,0:3:9.03:0,9,131	0/0:18,0:9:25.64:0,26,344	0/0:30,0:30:87.28:0,87,4763	0/0:27,0:26:74.99:0,75,4450	0/0:24,0:24:69.24:0,69,2826	0/0:25,0:22:53.93:0,54,401	0/0:27,0:27:75.24:0,75,3624	0/0:24,0:22:66.22:0,66,3183	0/0:22,0:22:49.35:0,49,1961	0/0:28,0:27:51.16:0,51,2303	0/0:41,0:41:70.44:0,70,2975	0/0:38,0:38:78.27:0,78,3282	0/0:35,0:34:99:0,102,5445	0/0:26,0:26:54.18:0,54,2246	0/0:23,0:23:57.19:0,57,2919	0/0:9,0:9:24.08:0,24,981	0/1:11,4:14:99:424,0,154	0/1:30,9:36:99:1045,0,209	0/0:14,0:14:0.69:0,1,97	0/0:29,0:26:47.88:0,48,1760	0/0:19,0:17:29.68:0,30,1263	0/0:22,0:22:40.59:0,41,1378	0/0:25,0:25:54.66:0,55,1889	0/0:18,0:17:51.17:0,51,2446	0/1:12,9:22:99:1072,0,128	0/0:14,0:14:33.11:0,33,1172
chr10	32161763	.	T	TGA	1404.30	PASS	AB=0.801;AC=16;AF=0.364;AN=44;BaseQRankSum=-3.222;DP=219;FS=25.195;HRun=0;HaplotypeScore=50.7174;InbreedingCoeff=-0.4288;MQ=56.05;MQ0=24;MQRankSum=-3.378;QD=9.12;ReadPosRankSum=2.572;VQSLOD=1.5909;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:8,7:12:28.09:28,0,81	0/1:10,0:9:1.28:1,0,85	0/0:19,0:5:12.43:0,12,101	0/0:16,0:10:4.50:0,4,105	0/1:12,1:13:14.88:26,0,15	0/1:14,0:13:16.42:16,0,123	./.	0/0:3,0:2:0:0,0,0	0/1:4,0:3:3.35:3,0,14	0/1:4,11:14:10.36:315,0,10	0/1:6,4:10:52.04:157,0,52	0/0:3,0:3:3:0,3,28	0/1:2,7:9:20.59:176,0,21	0/1:3,4:7:43.94:129,0,44	0/0:12,0:12:33.07:0,33,497	1/1:4,4:8:0.34:202,0,0	0/1:9,1:6:27.85:28,0,53	0/1:6,4:5:9.76:68,0,10	./.	./.	./.	0/0:3,0:3:6.62:0,7,38	0/1:9,0:7:21.68:52,0,22	./.	0/1:6,1:5:50.21:57,0,50	0/1:5,8:13:92.33:269,0,92	./.	0/0:1,0:1:3.01:0,3,37
chr10	32161764	.	T	TTTTTTG	3834.89	PASS	AB=1.000;AC=37;AF=0.841;AN=44;BaseQRankSum=0.444;DP=219;FS=28.533;HRun=0;HaplotypeScore=60.1635;InbreedingCoeff=0.4526;MQ=53.32;MQ0=26;MQRankSum=-2.934;QD=20.84;ReadPosRankSum=-0.730;VQSLOD=1.0898;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:12:9.78:128,10,0	1/1:9,0:9:20.16:304,20,0	0/1:19,0:5:7.47:7,0,88	0/0:15,0:9:8.13:0,8,131	1/1:11,1:13:29.42:310,29,0	1/1:12,1:13:35.62:464,36,0	./.	0/1:3,0:2:0:1,0,0	1/1:3,0:2:2.94:18,3,0	1/1:14,0:14:32.54:297,33,0	1/1:7,2:10:24.80:496,25,0	1/1:4,0:3:2.97:20,3,0	0/1:9,0:9:3.62:56,0,4	1/1:7,0:7:19.32:190,19,0	0/0:12,0:12:29.92:0,30,542	1/1:6,1:8:23.46:319,23,0	1/1:10,0:6:6.50:182,6,0	1/1:10,0:5:8.60:51,9,0	./.	./.	./.	1/1:3,0:3:8.96:180,9,0	1/1:6,2:7:12.04:309,12,0	./.	1/1:6,1:5:11.78:150,12,0	1/1:13,0:13:18.87:328,19,0	./.	1/1:2,0:1:2.99:24,3,0
chr10	32161765	.	A	AT	1244.39	PASS	AC=34;AF=0.895;AN=38;BaseQRankSum=3.319;DP=220;FS=6.107;HRun=12;HaplotypeScore=49.6767;InbreedingCoeff=0.5650;MQ=50.22;MQ0=28;MQRankSum=-5.450;QD=7.07;ReadPosRankSum=-1.553;VQSLOD=1.3173;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:11:5.68:28,6,0	1/1:6,3:9:10.68:95,11,0	1/1:19,0:5:5.32:22,5,0	0/0:14,0:8:5.78:0,6,41	1/1:3,11:14:24.04:240,24,0	1/1:6,8:13:8.70:198,9,0	./.	./.	1/1:1,2:2:3.01:32,3,0	1/1:14,1:14:26.30:141,26,0	1/1:7,1:10:18.13:92,18,0	./.	1/1:9,0:9:14.68:70,15,0	1/1:8,0:7:13.62:64,14,0	0/0:12,0:12:26.96:0,27,221	1/1:5,1:8:20.85:115,21,0	1/1:10,0:6:7.71:34,8,0	1/1:10,0:5:8.48:41,8,0	./.	./.	./.	1/1:3,0:3:5.12:23,5,0	1/1:3,0:7:8.58:33,9,0	./.	1/1:7,0:6:6.11:28,6,0	1/1:12,0:12:22.17:103,22,0	./.	./.
chr10	32161769	.	T	TGA	718.41	PASS	AB=0.895;AC=15;AF=0.395;AN=38;BaseQRankSum=3.010;DP=213;FS=16.139;HRun=0;HaplotypeScore=51.3841;InbreedingCoeff=-0.3129;MQ=47.00;MQ0=36;MQRankSum=-2.404;QD=5.44;ReadPosRankSum=1.074;VQSLOD=1.1197;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:13,1:10:11.51:46,0,12	0/1:8,2:9:71.09:76,0,71	0/0:18,0:4:11.46:0,11,97	0/0:14,0:8:11.08:0,11,115	0/0:13,0:13:5.92:0,6,142	0/1:10,1:10:52.19:52,0,137	./.	./.	0/0:4,0:3:3:0,3,25	0/1:14,0:13:0.32:30,0,0	0/1:8,2:10:22.17:126,0,22	./.	0/1:9,0:9:6.86:7,0,64	0/1:7,1:7:2.47:54,0,2	0/0:10,0:10:27.09:0,27,441	0/1:7,1:8:11.53:72,0,12	0/1:7,2:5:12.30:96,0,12	0/1:10,0:5:1.05:1,0,34	./.	./.	./.	0/1:1,2:3:23.63:92,0,24	1/1:9,1:7:7.29:81,7,0	./.	0/1:5,0:3:16.66:17,0,32	0/1:10,1:11:19.35:91,0,19	./.	./.
chr10	32165893	.	ATGTTGTTGTTGTCAT	A	7937.78	PASS	AB=0.593;AC=9;AF=0.161;AN=56;BaseQRankSum=13.177;DP=779;FS=3.539;HRun=0;HaplotypeScore=311.0777;InbreedingCoeff=0.8674;MQ=69.83;MQ0=2;MQRankSum=-11.285;QD=79.38;ReadPosRankSum=0.726;VQSLOD=4.1120;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:21:60.21:0,60,3695	0/1:5,11:16:99:1377,0,183	0/0:35,0:29:63.22:0,63,2857	0/0:29,0:25:53.79:0,54,2946	1/1:9,21:30:51.17:1799,51,0	1/1:3,19:22:45.15:1759,45,0	1/1:1,11:12:30.10:1203,30,0	0/0:38,0:38:87.29:0,87,4862	1/1:5,15:20:42.14:1800,42,0	0/0:31,0:31:81.28:0,81,5042	0/0:27,0:27:78.27:0,78,5071	0/0:32,0:32:90.31:0,90,6389	0/0:48,0:48:99:0,135,8884	0/0:31,0:31:87.28:0,87,5248	0/0:33,0:33:81.28:0,81,5307	0/0:24,0:24:66.23:0,66,4687	0/0:24,0:24:57.20:0,57,3746	0/0:31,0:31:87.30:0,87,4912	0/0:30,0:30:87.30:0,87,5028	0/0:32,0:32:87.28:0,87,5730	0/0:27,0:27:66.23:0,66,3903	0/0:31,0:31:87.30:0,87,5365	0/0:37,0:37:96.30:0,96,5938	0/0:16,0:16:42.14:0,42,2544	0/0:18,0:18:54.19:0,54,3594	0/0:23,0:23:57.20:0,57,3900	0/0:45,0:45:99:0,114,7519	0/0:15,0:15:39.13:0,39,2329
chr10	32166224	.	CAG	C	5793.98	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=12.981;DP=697;FS=10.548;HRun=0;HaplotypeScore=91.7099;InbreedingCoeff=0.9990;MQ=85.47;MQ0=0;MQRankSum=1.187;QD=43.24;ReadPosRankSum=-0.759;VQSLOD=5.8126;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,102,2039	0/0:14,0:14:41.97:0,42,722	0/0:25,0:26:51.37:0,51,1278	0/0:26,0:27:50.39:0,50,1132	0/0:19,0:19:54.19:0,54,1075	0/0:30,0:30:90.27:0,90,1738	0/0:16,0:16:48.16:0,48,961	1/1:0,27:27:78.26:1250,78,0	0/0:31,0:31:87.27:0,87,1690	0/0:30,0:30:87.30:0,87,1765	0/0:17,0:17:51.17:0,51,1020	0/0:23,0:23:69.22:0,69,1364	0/0:27,0:27:78.23:0,78,1485	0/0:34,0:34:99:0,102,2017	0/0:44,0:44:99:0,132,2593	0/0:20,0:20:60.19:0,60,1179	0/0:22,0:22:66.23:0,66,1325	0/0:14,0:14:42.14:0,42,851	1/1:0,23:23:66.17:995,66,0	1/1:0,28:28:66.22:1055,66,0	1/1:0,30:30:78.27:1272,78,0	0/0:26,0:26:75.23:0,75,1436	0/0:26,0:26:78.25:0,78,1540	0/0:31,0:31:93.30:0,93,1850	0/0:21,0:21:63.19:0,63,1205	0/0:24,0:24:72.23:0,72,1390	1/1:0,26:26:75.26:1221,75,0	0/0:7,0:7:21.04:0,21,388
chr10	32166989	.	A	AT	3961	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-8.944;DP=646;FS=0.393;HRun=5;HaplotypeScore=60.5955;InbreedingCoeff=0.9943;MQ=82.99;MQ0=0;MQRankSum=-1.036;QD=33.57;ReadPosRankSum=-0.505;VQSLOD=3.7120;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:78.20:0,78,838	0/0:5,0:5:15.04:0,15,161	0/0:20,0:20:51.10:0,51,525	0/0:18,0:18:47.95:0,48,486	0/0:26,0:26:69.17:0,69,741	0/0:28,0:28:75.18:0,75,806	0/0:24,0:24:66.13:0,66,692	1/1:5,17:22:51.12:626,51,0	0/0:25,0:25:72.16:0,72,765	0/0:33,0:33:87.21:0,87,935	0/0:31,0:31:87.19:0,87,925	0/0:18,0:18:51.11:0,51,540	0/0:24,0:24:72.15:0,72,762	0/0:20,0:20:57.14:0,57,612	0/0:26,0:26:69.17:0,69,741	0/0:21,0:21:51.13:0,51,548	0/0:36,0:37:99:0,100,1118	0/0:17,0:17:45.11:0,45,484	1/1:3,12:15:36.12:474,36,0	1/1:3,33:36:93.26:1204,93,0	1/1:0,13:13:39.13:513,39,0	0/0:21,0:21:63.15:0,63,670	0/0:19,0:19:51.11:0,51,539	0/0:11,0:11:33.06:0,33,345	0/0:27,0:27:81.19:0,81,863	0/0:43,0:43:99:0,123,1313	1/1:1,30:31:87.28:1145,87,0	0/0:6,0:6:18.05:0,18,193
chr10	32167206	.	TAGA	T	22523.15	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=11.144;DP=637;FS=10.097;HRun=0;HaplotypeScore=171.7068;InbreedingCoeff=0.9659;MQ=77.71;MQ0=0;MQRankSum=-13.444;QD=41.40;ReadPosRankSum=1.086;VQSLOD=5.6175;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,20:27:71.80:985,72,0	1/1:3,3:6:12.04:196,12,0	0/0:21,0:21:50.38:0,50,1064	0/0:27,0:27:72.25:0,72,1511	1/1:9,24:33:84.20:1239,84,0	1/1:4,16:20:54.10:824,54,0	1/1:0,13:13:33.11:537,33,0	1/1:8,16:24:66.12:973,66,0	1/1:2,16:18:51.09:775,51,0	1/1:2,25:27:75.26:1222,75,0	1/1:5,16:21:39.12:611,39,0	1/1:3,26:29:84.22:1326,84,0	1/1:2,26:28:84.25:1337,84,0	1/1:4,21:25:75.24:1196,75,0	0/0:45,0:45:99:0,123,2658	1/1:5,24:29:81.24:1267,81,0	1/1:6,13:19:44.93:615,45,0	1/1:2,10:12:30.10:489,30,0	1/1:5,22:27:75.25:1194,75,0	1/1:4,23:27:69.17:1089,69,0	1/1:0,9:9:17.81:293,18,0	1/1:3,15:18:48.15:758,48,0	1/1:4,22:26:72.08:1086,72,0	1/1:4,16:20:47.89:657,48,0	1/1:5,24:29:78.11:1181,78,0	1/1:3,31:34:99:1639,102,0	1/1:2,18:20:60.02:888,60,0	1/1:0,3:3:9.03:146,9,0
chr10	32167221	.	AG	A	18534.58	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=12.943;DP=671;FS=18.005;HRun=3;HaplotypeScore=174.8758;InbreedingCoeff=0.9905;MQ=78.03;MQ0=0;MQRankSum=-13.387;QD=32.23;ReadPosRankSum=2.741;VQSLOD=2.4582;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,26:29:57.16:691,57,0	1/1:0,6:6:18.06:223,18,0	0/0:22,0:22:59.27:0,59,835	0/0:27,0:27:58.30:0,58,993	1/1:0,30:30:84.20:1019,84,0	1/1:1,25:26:72.21:879,72,0	1/1:2,9:11:27.08:334,27,0	1/1:3,19:22:60.18:731,60,0	1/1:0,21:21:60.19:743,60,0	1/1:3,27:30:90.27:1096,90,0	1/1:1,20:21:48.15:593,48,0	1/1:2,27:29:81.10:937,81,0	1/1:2,32:34:96.29:1175,96,0	1/1:2,25:27:75.24:928,75,0	0/0:47,0:47:99:0,138,1941	1/1:0,31:31:90.28:1113,90,0	1/1:2,18:20:51.05:594,51,0	1/1:0,14:14:36.11:446,36,0	1/1:7,24:31:75.23:927,75,0	1/1:2,23:25:66.19:804,66,0	1/1:3,10:13:24.49:267,24,0	1/1:1,20:21:57.18:705,57,0	1/1:3,22:25:69.12:821,69,0	1/1:3,19:22:45.01:519,45,0	1/1:2,24:26:72.23:891,72,0	1/1:2,32:34:96.30:1188,96,0	1/1:0,21:21:60.12:723,60,0	1/1:0,6:6:15.05:186,15,0
chr10	32167299	.	C	CGCTA	7953.69	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=5.764;DP=724;FS=5.353;HRun=0;HaplotypeScore=142.7802;InbreedingCoeff=0.9962;MQ=86.97;MQ0=0;MQRankSum=-7.207;QD=64.66;ReadPosRankSum=-3.033;VQSLOD=5.7815;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:90.27:0,90,1640	0/0:12,0:12:36.12:0,36,672	0/0:30,0:30:46.59:0,47,1132	0/0:24,0:25:56.60:0,57,959	0/0:23,0:23:63.22:0,63,1176	0/0:31,0:31:78.22:0,78,1402	0/0:22,0:22:57.20:0,57,1056	1/1:13,21:37:93.25:2174,93,0	0/0:29,0:29:78.27:0,78,1448	0/0:22,0:22:57.19:0,57,1035	0/0:20,0:20:54.17:0,54,976	0/0:33,0:33:87.28:0,87,1582	0/0:36,0:36:90.31:0,90,1665	0/0:25,0:25:66.23:0,66,1218	0/0:43,0:43:99:0,123,2267	0/0:37,0:37:99:0,99,1847	0/0:24,0:24:69.24:0,69,1287	0/0:15,0:15:39.13:0,39,727	1/1:7,12:21:57.18:1293,57,0	1/1:7,21:28:72.25:1869,72,0	1/1:0,7:7:15.05:388,15,0	0/0:23,0:23:69.24:0,69,1286	0/0:18,0:18:48.15:0,48,865	0/0:29,0:29:72.24:0,72,1343	0/0:22,0:22:66.23:0,66,1219	0/0:32,0:32:90.29:0,90,1594	1/1:4,25:30:84.29:2230,84,0	0/0:15,0:15:42.14:0,42,774
chr10	32167618	.	CG	C	4108.05	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=9.263;DP=654;FS=7.235;HRun=1;HaplotypeScore=66.7219;InbreedingCoeff=0.9989;MQ=85.51;MQ0=0;MQRankSum=-1.756;QD=36.04;ReadPosRankSum=-1.947;VQSLOD=2.8148;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,111,1755	0/0:13,0:13:39.11:0,39,596	0/0:19,0:19:47.64:0,48,651	0/0:23,1:24:63.17:0,63,933	0/0:13,0:13:38.96:0,39,537	0/0:19,0:19:57.19:0,57,883	0/0:27,0:27:78.17:0,78,1161	1/1:0,31:31:93.31:1299,93,0	0/0:26,0:26:75.20:0,75,1143	0/0:21,0:21:63.15:0,63,918	0/0:16,0:16:42.13:0,42,648	0/0:28,0:28:81.28:0,81,1291	0/0:32,0:32:96.33:0,96,1525	0/0:28,0:28:81.25:0,81,1263	0/0:45,0:45:99:0,135,2061	0/0:31,0:31:93.30:0,93,1460	0/0:38,0:38:99:0,114,1768	0/0:16,0:16:48.15:0,48,743	1/1:0,20:20:57.18:778,57,0	1/1:0,13:13:33.06:438,33,0	1/1:0,27:27:63.21:881,63,0	0/0:14,0:14:42.14:0,42,664	0/0:11,0:11:33.11:0,33,526	0/0:41,0:41:99:0,123,1947	0/0:15,0:15:45.15:0,45,698	0/0:17,0:17:51.17:0,51,790	1/1:0,23:23:51.17:713,51,0	0/0:7,0:7:21.07:0,21,335
chr10	32168294	.	C	CTTGAGGGACTAA	73505.73	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-5.976;DP=658;FS=0.516;HRun=0;HaplotypeScore=200.4587;InbreedingCoeff=0.9937;MQ=59.83;MQ0=0;MQRankSum=-11.536;QD=125.65;ReadPosRankSum=3.014;VQSLOD=4.7160;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:22,23:48:99:5994,123,0	1/1:2,11:14:39.09:2196,39,0	0/0:20,0:20:40.28:0,40,1199	0/0:30,0:30:75.08:0,75,1914	1/1:11,10:23:51.13:2226,51,0	1/1:10,9:22:48.16:2625,48,0	1/1:9,7:18:39.13:2083,39,0	1/1:24,3:28:60.21:3133,60,0	1/1:5,11:16:42.14:2302,42,0	1/1:10,12:25:69.24:3785,69,0	1/1:7,8:17:36.12:1602,36,0	1/1:7,21:28:78.27:4692,78,0	1/1:7,13:20:57.20:3084,57,0	1/1:14,18:33:87.30:4785,87,0	0/0:23,0:23:51.18:0,51,1824	1/1:7,11:18:48.13:2621,48,0	1/1:10,12:24:54.19:3006,54,0	1/1:9,9:21:45.15:2125,45,0	1/1:13,8:24:57.60:2523,58,0	1/1:22,18:44:96.20:4531,96,0	1/1:11,2:13:14.97:556,15,0	1/1:14,13:28:63.17:2938,63,0	1/1:5,10:15:42.14:2345,42,0	1/1:14,6:22:39.06:1801,39,0	1/1:10,18:29:69.24:3940,69,0	1/1:9,9:21:63.22:3293,63,0	1/1:14,11:25:66.23:3694,66,0	1/1:5,4:9:27.09:1625,27,0
chr10	32168346	.	GGTGTGTGTGTGTGTGT	G	1030.79	PASS	AB=0.963;AC=7;AF=0.135;AN=52;BaseQRankSum=3.908;DP=560;FS=4.057;HRun=0;HaplotypeScore=276.6757;InbreedingCoeff=0.6873;MQ=58.42;MQ0=7;MQRankSum=0.816;QD=12.88;ReadPosRankSum=-0.411;VQSLOD=2.3205;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:29.63:0,30,1975	0/0:10,0:10:8.75:0,9,477	./.	0/0:27,0:20:4.82:0,5,38	0/0:21,0:21:15.52:0,16,694	0/0:25,0:25:39.13:0,39,2468	0/0:25,0:25:33.10:0,33,1500	1/1:14,6:20:18.05:357,18,0	0/0:14,0:14:9.03:0,9,624	0/0:23,0:22:24.97:0,25,1354	0/0:18,0:17:24.08:0,24,1670	0/0:16,0:16:24.04:0,24,1466	0/0:14,0:16:29.09:0,29,1473	0/0:26,0:28:47.61:0,48,2649	0/0:16,0:18:18.06:0,18,1138	0/0:26,0:28:48.16:0,48,3354	0/0:21,0:21:33.11:0,33,2169	0/0:13,0:13:24.08:0,24,1371	./.	1/1:20,5:25:15.05:500,15,0	0/1:25,1:25:14.96:66,0,15	0/0:19,0:19:21.07:0,21,1111	0/0:13,0:12:18.05:0,18,858	0/0:24,0:26:21.05:0,21,1079	0/0:17,0:16:15.05:0,15,877	0/0:12,0:13:18.06:0,18,983	1/1:6,1:8:6.02:243,6,0	0/0:4,0:4:6.02:0,6,123
chr10	32168392	.	T	TGTGTGC	1416.57	PASS	AB=0.782;AC=8;AF=0.143;AN=56;BaseQRankSum=1.132;DP=557;FS=17.818;HRun=0;HaplotypeScore=146.7558;InbreedingCoeff=0.6239;MQ=61.72;MQ0=14;MQRankSum=-1.665;QD=13.24;ReadPosRankSum=0.593;VQSLOD=2.1133;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:47:56.44:0,56,590	1/1:8,1:9:14.94:231,15,0	0/0:36,0:23:59.76:0,60,660	0/0:28,0:16:48.08:0,48,511	0/0:3,5:8:6.02:0,6,83	1/1:25,1:28:59.22:938,59,0	0/1:7,18:31:31.18:114,0,31	0/0:21,0:21:27.91:0,28,273	1/1:2,12:19:8.57:255,9,0	0/1:20,0:18:25.58:26,0,227	0/0:14,0:13:30.04:0,30,464	0/0:23,0:23:41.67:0,42,499	0/0:26,0:26:58.52:0,59,614	0/0:23,0:23:50.31:0,50,558	0/0:18,0:18:35.04:0,35,464	0/0:23,0:23:60.12:0,60,1180	0/0:21,0:21:41.33:0,41,512	0/0:15,0:15:16.81:0,17,413	0/0:8,0:8:23.94:0,24,200	0/0:15,0:15:26.82:0,27,287	0/0:25,0:24:29.94:0,30,242	0/0:16,0:15:41.96:0,42,455	0/0:7,0:7:6.95:0,7,99	0/0:30,0:30:11.61:0,12,340	0/0:11,0:11:29.99:0,30,345	0/0:17,0:17:25.07:0,25,430	0/0:12,0:12:29.93:0,30,268	0/0:4,0:4:11.91:0,12,87
chr10	32169637	.	A	AT	13659.76	PASS	AB=1.000;AC=51;AF=0.911;AN=56;BaseQRankSum=3.918;DP=652;FS=2.092;HRun=9;HaplotypeScore=113.5512;InbreedingCoeff=0.7978;MQ=70.81;MQ0=0;MQRankSum=-4.772;QD=22.21;ReadPosRankSum=2.031;VQSLOD=4.5157;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,27:27:66.18:730,66,0	1/1:0,0:16:42.61:213,43,0	0/1:23,0:24:10.02:10,0,209	0/0:14,0:14:17.13:0,17,147	1/1:3,1:29:79.96:416,80,0	1/1:6,2:32:59.79:305,60,0	1/1:1,0:18:42.61:213,43,0	1/1:3,29:31:84.20:911,84,0	1/1:3,1:31:68.18:341,68,0	1/1:1,35:36:99:1158,105,0	1/1:3,21:24:63.13:683,63,0	1/1:1,22:23:57.15:631,57,0	1/1:2,16:18:30.08:332,30,0	1/1:3,19:22:54.11:585,54,0	0/0:23,0:23:65.99:0,66,573	1/1:3,16:20:48.13:527,48,0	1/1:2,17:19:45.12:498,45,0	1/1:2,16:18:36.10:397,36,0	1/1:3,20:23:62.96:676,63,0	1/1:5,27:32:81.18:881,81,0	1/1:2,11:13:27.07:299,27,0	1/1:3,16:19:33.09:365,33,0	1/1:1,19:19:51.14:564,51,0	1/1:2,17:19:48.13:531,48,0	1/1:5,20:25:54.15:597,54,0	1/1:3,25:28:69.17:754,69,0	1/1:8,25:34:65.88:711,66,0	1/1:1,12:13:30.08:332,30,0
chr10	32171230	.	T	TAAAAATAAAA	10217.88	PASS	AB=1.000;AC=50;AF=0.893;AN=56;BaseQRankSum=-2.146;DP=406;FS=9.331;HRun=0;HaplotypeScore=87.1920;InbreedingCoeff=0.3733;MQ=69.26;MQ0=3;MQRankSum=-3.429;QD=26.61;ReadPosRankSum=-2.062;VQSLOD=2.4523;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,10:23:12.04:541,12,0	0/0:7,0:7:15.05:0,15,436	0/1:33,0:15:13.48:13,0,29	0/1:30,0:15:5.62:6,0,136	1/1:6,9:18:11.95:261,12,0	1/1:6,12:22:24.08:1184,24,0	1/1:5,2:7:6.02:296,6,0	1/1:6,0:28:52.43:661,52,0	1/1:4,3:9:3.01:148,3,0	1/1:5,8:16:26.94:704,27,0	1/1:6,5:15:6.02:296,6,0	1/1:9,0:9:15.03:378,15,0	1/1:7,1:9:3.01:148,3,0	1/1:5,5:12:9.03:444,9,0	0/0:15,0:15:33.05:0,33,891	1/1:6,0:6:6.01:149,6,0	1/1:5,5:13:3.01:148,3,0	1/1:5,3:11:3.01:148,3,0	1/1:5,0:16:27.01:555,27,0	1/1:5,0:12:17.53:462,18,0	1/1:3,0:3:2.60:10,3,0	1/1:3,1:4:6.02:257,6,0	1/1:6,6:14:12.04:480,12,0	1/1:4,0:4:6.02:275,6,0	1/1:11,6:22:12.04:592,12,0	1/1:5,5:19:35.87:960,36,0	1/1:4,0:24:27.09:980,27,0	1/1:5,0:5:9.01:123,9,0
chr10	32171940	.	A	AT	3233.06	PASS	AB=0.730;AC=26;AF=0.481;AN=54;BaseQRankSum=-1.724;DP=503;FS=2.396;HRun=4;HaplotypeScore=95.2790;InbreedingCoeff=0.6827;MQ=75.23;MQ0=0;MQRankSum=-1.721;QD=12.68;ReadPosRankSum=1.311;VQSLOD=2.0039;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,19:27:22.07:377,22,0	0/0:11,0:11:33.07:0,33,338	0/0:28,0:17:29.47:0,29,381	0/0:34,0:20:3.56:0,4,252	0/0:33,0:33:92.56:0,93,859	0/0:16,0:16:28.87:0,29,309	0/0:7,0:7:15.02:0,15,146	0/0:38,0:38:99:0,101,763	0/0:7,0:7:14.83:0,15,141	1/1:8,8:16:14.38:210,14,0	1/1:5,11:17:21.74:246,22,0	0/1:11,18:29:1.68:253,0,2	1/1:4,12:17:23.93:258,24,0	1/1:7,5:12:16.37:200,16,0	0/0:17,0:17:51.14:0,51,600	1/1:5,5:10:17.65:191,18,0	1/1:4,20:25:26.76:421,27,0	0/1:7,6:13:32.22:188,0,32	0/0:19,0:19:56.81:0,57,525	0/0:20,0:20:55.81:0,56,450	./.	1/1:5,9:15:5.91:146,6,0	1/1:4,5:8:10.06:80,10,0	1/1:1,18:19:36.10:393,36,0	0/1:8,13:21:22.71:185,0,23	1/1:6,13:20:7.92:235,8,0	0/0:14,0:14:27.15:0,27,190	0/1:4,0:4:5.83:57,0,6
chr10	32171943	.	TA	T	3208.04	PASS	AB=1.000;AC=31;AF=0.574;AN=54;BaseQRankSum=2.314;DP=495;FS=2.729;HRun=1;HaplotypeScore=95.1714;InbreedingCoeff=0.9274;MQ=75.68;MQ0=0;MQRankSum=-0.589;QD=11.22;ReadPosRankSum=-0.375;VQSLOD=1.6771;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:25,1:26:48.67:337,49,0	0/0:11,0:11:32.95:0,33,293	0/0:29,0:17:37.91:0,38,446	0/1:36,0:21:4.06:4,0,277	0/0:32,0:32:92.70:0,93,813	0/0:16,0:16:32.93:0,33,294	0/0:7,0:7:15.02:0,15,141	0/0:35,0:35:99:0,103,723	0/0:7,0:7:14.98:0,15,130	1/1:18,0:17:41.60:298,42,0	1/1:15,2:17:41.80:321,42,0	1/1:27,1:28:36.80:291,37,0	1/1:17,0:17:34.66:234,35,0	1/1:11,0:11:19.34:178,19,0	0/0:17,0:17:51.15:0,51,660	1/1:10,0:10:21.60:191,22,0	1/1:23,1:24:45.66:306,46,0	1/1:13,0:13:13.27:138,13,0	0/0:20,0:20:45.93:0,46,390	0/0:21,0:21:39.48:0,39,388	./.	1/1:15,0:15:32.69:244,33,0	1/1:9,0:8:14.53:99,15,0	1/1:18,0:18:34.91:202,35,0	1/1:21,0:21:31.09:248,31,0	1/1:18,0:18:28.97:257,29,0	0/0:14,0:14:35.02:0,35,204	1/1:5,0:5:10.53:82,11,0
chr10	32171944	.	A	AT	6347.52	PASS	AB=1.000;AC=45;AF=0.833;AN=54;BaseQRankSum=-4.705;DP=497;FS=8.066;HRun=9;HaplotypeScore=84.7344;InbreedingCoeff=0.5187;MQ=75.62;MQ0=0;MQRankSum=1.286;QD=15.30;ReadPosRankSum=1.589;VQSLOD=4.6816;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:27:21.44:375,21,0	1/1:11,0:11:26.54:166,27,0	0/0:29,0:17:34.19:0,34,260	0/0:36,0:21:9.76:0,10,179	1/1:32,0:32:79.81:520,80,0	1/1:16,0:16:29.24:190,29,0	1/1:7,0:7:14.71:89,15,0	1/1:7,27:34:35.67:794,36,0	1/1:7,0:7:11.86:81,12,0	1/1:18,0:17:13.98:215,14,0	1/1:18,0:18:20.75:238,21,0	1/1:28,0:28:0.98:264,1,0	1/1:17,0:17:23.12:255,23,0	1/1:11,0:11:14.31:199,14,0	0/0:17,0:17:47.97:0,48,412	1/1:10,0:10:17.19:190,17,0	1/1:25,0:25:27.05:419,27,0	0/1:11,0:11:34.57:167,0,35	1/1:9,11:20:33.09:360,33,0	1/1:8,13:21:35.76:368,36,0	./.	1/1:15,0:15:7.33:151,7,0	1/1:9,0:8:8.86:80,9,0	1/1:18,0:18:36.10:394,36,0	0/1:21,0:21:21.95:185,0,22	1/1:18,0:18:13.13:224,13,0	1/1:2,13:15:33.09:365,33,0	0/1:6,0:6:4.49:58,0,4
chr10	32171947	.	T	TA	2568.72	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=0.803;DP=496;FS=3.322;HRun=0;HaplotypeScore=93.5626;InbreedingCoeff=0.1155;MQ=74.76;MQ0=0;MQRankSum=2.430;QD=8.34;ReadPosRankSum=10.384;VQSLOD=2.2734;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:28:30.97:31,0,178	1/1:0,10:10:27.09:386,27,0	0/0:30,0:18:43.88:0,44,493	0/0:36,0:21:24.82:0,25,343	1/1:0,32:32:90.09:1181,90,0	1/1:1,15:16:29.83:425,30,0	1/1:0,8:8:15.05:214,15,0	0/1:33,0:33:99:99,0,127	1/1:0,6:6:12.04:171,12,0	0/0:19,0:18:15.04:0,15,233	0/0:18,0:18:8.81:0,9,193	0/1:27,0:27:3.58:4,0,219	0/1:17,0:17:11.33:11,0,49	0/1:10,0:10:8.02:8,0,75	0/0:18,0:18:51.16:0,51,697	0/1:11,0:11:5.84:6,0,78	0/1:25,0:25:35.64:36,0,93	0/1:11,0:11:9.39:9,0,154	0/1:20,0:20:10.34:10,0,170	0/1:20,0:20:29.27:29,0,124	0/0:1,0:1:2.97:0,3,20	0/0:14,0:14:10.14:0,10,188	0/0:10,0:9:0.60:0,1,49	1/1:18,0:18:25.61:80,26,0	0/0:19,0:19:3.17:0,3,204	0/0:17,0:17:4.72:0,5,178	0/1:16,0:16:23.02:46,0,23	0/0:6,0:6:3.12:0,3,100
chr10	32172648	.	AACAC	A	17373.95	PASS	AB=0.692;AC=42;AF=0.750;AN=56;BaseQRankSum=1.265;DP=902;FS=7.763;HRun=0;HaplotypeScore=205.2182;InbreedingCoeff=0.6088;MQ=52.04;MQ0=23;MQRankSum=-3.758;QD=24.64;ReadPosRankSum=-0.332;VQSLOD=3.7561;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:23,19:43:50.74:1156,51,0	1/1:4,14:18:42.06:632,42,0	0/0:52,0:10:5.81:0,6,52	0/0:55,0:18:12.03:0,12,191	1/1:10,13:23:45.12:686,45,0	1/1:15,15:30:65.01:972,65,0	1/1:10,15:26:65.13:841,65,0	0/1:28,0:50:39.94:40,0,226	1/1:21,21:42:15.02:1212,15,0	1/1:15,26:40:90.24:1370,90,0	1/1:8,16:24:53.86:891,54,0	1/1:10,15:25:53.90:803,54,0	1/1:19,10:29:33.40:784,33,0	1/1:4,16:21:60.10:873,60,0	0/0:38,0:38:75.19:0,75,1589	1/1:15,19:35:82.82:1285,83,0	1/1:13,12:26:48.58:705,49,0	0/1:10,1:11:2.01:185,0,2	0/0:9,0:17:27.15:0,27,115	0/1:7,1:27:16.33:16,0,177	0/1:17,2:60:53.57:54,0,253	1/1:16,18:33:78.16:1143,78,0	1/1:16,18:35:75.05:1020,75,0	1/1:22,16:38:51.13:876,51,0	1/1:8,15:23:57.08:817,57,0	1/1:15,9:24:51.03:709,51,0	0/0:3,0:31:62.85:0,63,290	1/1:10,8:17:8.60:307,9,0
chr10	32172692	.	A	AAC	17065.05	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-2.621;DP=963;FS=1.830;HRun=0;HaplotypeScore=197.7461;InbreedingCoeff=0.9980;MQ=49.87;MQ0=38;MQRankSum=-2.193;QD=28.44;ReadPosRankSum=4.721;VQSLOD=5.5473;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:14,22:37:48.63:793,49,0	1/1:3,19:23:48.14:774,48,0	0/0:74,0:27:52.75:0,53,647	0/0:53,0:21:39.02:0,39,454	1/1:4,22:26:39.13:640,39,0	1/1:7,24:30:48.15:776,48,0	1/1:7,18:25:30.10:502,30,0	0/0:44,0:41:60.68:0,61,1004	1/1:10,29:39:51.17:852,51,0	1/1:10,34:45:99:1730,111,0	1/1:8,18:26:39.13:614,39,0	1/1:9,16:24:35.25:520,35,0	1/1:7,25:32:63.22:1053,63,0	1/1:7,27:34:78.27:1275,78,0	0/0:40,0:39:87.28:0,87,1107	1/1:11,35:45:75.26:1242,75,0	1/1:6,15:20:40.44:629,40,0	1/1:3,6:9:17.19:224,17,0	0/0:25,0:18:42:0,42,526	0/0:29,0:29:66.19:0,66,813	0/0:56,0:55:99:0,124,1527	1/1:9,28:36:44.43:1041,44,0	1/1:8,22:30:38.58:637,39,0	1/1:10,19:29:36.10:557,36,0	1/1:5,26:31:34.05:1115,34,0	1/1:4,35:38:99:1668,102,0	0/0:37,0:37:81.25:0,81,1019	1/1:1,12:13:27.07:423,27,0
chr10	32173563	.	A	AT	1892.13	PASS	AB=0.905;AC=11;AF=0.196;AN=56;BaseQRankSum=-7.998;DP=547;FS=2.183;HRun=10;HaplotypeScore=54.1797;InbreedingCoeff=0.8430;MQ=70.71;MQ0=0;MQRankSum=0.245;QD=17.68;ReadPosRankSum=1.414;VQSLOD=4.1669;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:43.65:0,44,404	1/1:2,8:10:21.05:224,21,0	0/1:17,1:17:5.90:6,0,181	0/0:11,0:11:3.44:0,3,32	1/1:7,24:31:69.10:718,69,0	1/1:4,19:23:42.11:448,42,0	1/1:0,9:9:24.06:256,24,0	0/0:27,0:27:50.88:0,51,414	1/1:1,14:15:39.10:416,39,0	0/0:19,0:19:50.31:0,50,402	0/0:29,0:29:77.91:0,78,640	0/0:25,0:25:59.91:0,60,492	0/0:18,0:18:53.92:0,54,440	0/0:26,0:26:68.89:0,69,565	0/0:17,0:18:47.77:0,48,381	0/0:23,1:25:16.26:0,16,338	0/0:14,0:14:38.95:0,39,320	0/0:15,0:15:44.94:0,45,369	0/0:22,0:22:50.93:0,51,419	0/0:26,0:26:37.12:0,37,510	0/0:10,0:10:23.97:0,24,197	0/0:12,1:13:6.97:0,7,262	0/0:26,0:26:68.87:0,69,561	0/0:17,0:17:50.91:0,51,413	0/0:22,0:22:59.90:0,60,487	0/0:34,0:34:95.86:0,96,783	0/0:20,0:20:47.92:0,48,391	0/0:3,0:3:8.99:0,9,74
chr10	32175169	.	ACACT	A	2662.55	PASS	AB=1.000;AC=17;AF=0.315;AN=54;BaseQRankSum=0.966;DP=525;FS=26.712;HRun=0;HaplotypeScore=93.4813;InbreedingCoeff=0.5977;MQ=71.29;MQ0=13;MQRankSum=0.017;QD=15.66;ReadPosRankSum=1.657;VQSLOD=1.1043;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:17,0:16:11.74:12,0,153	1/1:0,0:8:2.41:38,2,0	0/0:19,0:16:38.17:0,38,399	0/0:25,0:19:35.73:0,36,404	1/1:22,0:22:59.89:516,60,0	./.	0/0:7,19:24:0.47:0,0,1	1/1:23,0:22:57.04:527,57,0	1/1:23,0:23:68.97:795,69,0	0/0:17,0:16:9.85:0,10,308	0/0:20,0:20:27.69:0,28,307	0/0:12,0:12:7.39:0,7,145	0/0:20,0:20:34.76:0,35,331	0/0:23,0:22:41.82:0,42,402	0/0:22,0:20:50.90:0,51,601	0/0:28,0:28:1.33:0,1,322	0/0:16,0:16:11.10:0,11,197	0/0:10,0:10:1.15:0,1,54	1/1:14,0:15:45.08:494,45,0	1/1:2,0:12:2.96:19,3,0	1/1:23,0:21:41.94:429,42,0	0/1:15,0:15:1.27:1,0,209	0/0:17,0:17:38.88:0,39,309	0/0:25,0:22:50.43:0,50,376	0/1:12,0:12:1.08:1,0,188	0/0:21,0:21:23.05:0,23,351	0/0:0,0:18:0:0,0,0	0/0:13,0:12:3.80:0,4,213
chr10	32175171	.	ACTCTCT	A	2018.96	PASS	AB=1.000;AC=37;AF=0.740;AN=50;BaseQRankSum=1.578;DP=546;FS=13.419;HRun=0;HaplotypeScore=112.8494;InbreedingCoeff=0.4437;MQ=68.96;MQ0=17;MQRankSum=0.331;QD=5.94;ReadPosRankSum=1.292;VQSLOD=1.5163;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:16:12.51:209,13,0	1/1:8,0:8:3.01:41,3,0	./.	0/0:25,0:19:0.94:0,1,1	1/1:23,0:23:0.47:1,0,0	./.	0/0:29,0:27:0.89:0,1,2	0/0:25,0:24:0:0,0,0	1/1:23,0:23:23.11:168,23,0	1/1:17,0:16:2.74:60,3,0	1/1:21,0:21:6.02:109,6,0	1/1:12,0:12:6.02:107,6,0	1/1:19,0:19:1.71:51,2,0	0/1:23,0:22:9.73:10,0,112	0/0:22,0:20:18.03:0,18,422	1/1:29,0:28:24.06:369,24,0	1/1:18,0:17:8.99:139,9,0	1/1:7,0:9:2.95:59,3,0	1/1:17,0:17:12.04:175,12,0	./.	1/1:25,0:22:7.65:66,8,0	1/1:16,0:16:12.04:178,12,0	1/1:13,4:17:0.47:1,0,0	0/0:27,0:23:23.61:0,24,173	1/1:12,0:12:6.02:111,6,0	1/1:18,3:21:8.83:168,9,0	0/0:19,0:19:0:0,0,0	1/1:13,0:12:8.82:122,9,0
chr10	32176768	.	A	ACC	1854.37	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=2.468;DP=368;FS=13.124;HRun=9;HaplotypeScore=53.8232;InbreedingCoeff=0.8493;MQ=62.51;MQ0=2;MQRankSum=3.701;QD=10.91;ReadPosRankSum=1.393;VQSLOD=0.1561;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:12,9:24:13.28:154,13,0	0/0:3,0:3:6.01:0,6,63	0/0:16,0:14:26.76:0,27,256	0/0:12,0:10:5.35:0,5,40	0/0:19,0:19:51.12:0,51,543	0/0:7,0:7:17.78:0,18,172	0/0:19,0:18:36.06:0,36,382	0/0:18,0:17:39.08:0,39,415	0/0:18,0:18:51.12:0,51,543	1/1:9,0:10:8.52:92,9,0	1/1:2,0:4:11.11:98,11,0	1/1:3,3:7:8.34:101,8,0	1/1:4,10:14:12.04:185,12,0	1/1:2,6:9:5.51:55,6,0	0/0:23,0:23:60.12:0,60,627	1/1:2,5:10:13.51:118,14,0	1/1:5,15:22:25.55:303,26,0	1/1:3,12:17:15.03:231,15,0	0/0:8,0:7:11.99:0,12,116	0/0:14,0:14:36.08:0,36,383	0/0:28,0:28:69.15:0,69,733	1/1:2,0:2:3.01:46,3,0	1/1:7,1:14:12.44:116,12,0	1/1:1,8:10:17.55:238,18,0	1/1:3,9:13:8.52:101,9,0	1/1:4,6:11:17.53:211,18,0	0/0:10,0:11:27.68:0,28,269	1/1:2,0:2:2.98:21,3,0
chr10	32176947	.	GA	G	8078.42	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=8.395;DP=397;FS=6.953;HRun=6;HaplotypeScore=44.1452;InbreedingCoeff=0.9668;MQ=72.61;MQ0=0;MQRankSum=-1.865;QD=27.57;ReadPosRankSum=3.937;VQSLOD=5.0690;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,19:24:60.13:636,60,0	0/0:5,0:5:15.05:0,15,196	0/0:19,0:13:27.03:0,27,313	0/0:17,0:15:25.12:0,25,236	0/0:19,0:19:54.18:0,54,708	0/0:6,0:6:15.05:0,15,196	0/0:10,0:10:24.08:0,24,314	1/1:1,21:22:62.98:650,63,0	0/0:10,0:10:30.07:0,30,354	1/1:0,15:15:45.10:476,45,0	1/1:1,21:22:63.16:674,63,0	1/1:1,6:7:15.04:161,15,0	1/1:3,15:18:45.11:483,45,0	1/1:0,13:13:39.10:419,39,0	0/0:18,0:18:48.16:0,48,630	1/1:1,11:12:30.08:322,30,0	1/1:1,8:9:21.05:225,21,0	1/1:0,13:13:30.07:321,30,0	1/1:1,18:18:51.04:533,51,0	1/1:3,14:17:39.09:418,39,0	1/1:0,2:2:6.02:64,6,0	1/1:1,9:10:21.05:226,21,0	1/1:2,15:17:42.10:451,42,0	1/1:2,10:12:24.06:258,24,0	1/1:0,27:27:72.18:774,72,0	1/1:1,16:17:48.09:504,48,0	1/1:0,13:13:33.08:355,33,0	1/1:0,4:4:12.03:129,12,0
chr10	32177352	.	A	ATG	3919.53	PASS	AB=0.725;AC=10;AF=0.179;AN=56;BaseQRankSum=-8.458;DP=797;FS=4.493;HRun=0;HaplotypeScore=112.3501;InbreedingCoeff=0.6588;MQ=60.51;MQ0=6;MQRankSum=1.515;QD=23.06;ReadPosRankSum=-0.698;VQSLOD=4.1092;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:35:43.61:0,44,551	0/0:6,0:6:3.46:0,3,99	0/0:46,0:21:20.82:0,21,189	0/0:54,0:31:44.98:0,45,509	0/0:28,0:30:71.22:0,71,769	0/0:28,0:28:60.15:0,60,699	0/0:24,0:24:50.99:0,51,583	1/1:29,17:46:21.61:776,22,0	0/0:27,0:31:80.53:0,81,837	0/0:42,0:42:90.27:0,90,1066	0/0:18,0:18:29.82:0,30,354	0/0:34,0:34:76.88:0,77,931	0/0:25,0:29:53.83:0,54,591	0/0:23,0:25:59.85:0,60,668	0/0:35,0:37:95.75:0,96,1040	0/0:30,0:30:69.21:0,69,818	0/0:16,0:17:35.94:0,36,403	0/1:12,1:14:38.95:39,0,205	1/1:10,8:17:1.74:288,2,0	1/1:4,12:16:13.28:501,13,0	1/1:20,29:49:69.80:1567,70,0	0/0:21,0:21:44.72:0,45,507	0/0:19,0:20:41.96:0,42,475	0/0:22,0:27:50.81:0,51,560	0/0:15,0:15:33.10:0,33,390	0/0:34,0:35:75.06:0,75,867	0/1:7,20:27:43.87:748,0,44	0/0:22,0:23:47.98:0,48,547
chr10	32177520	.	GTA	G	16911.77	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=4.023;DP=837;FS=1.172;HRun=0;HaplotypeScore=165.8481;InbreedingCoeff=0.9369;MQ=66.23;MQ0=8;MQRankSum=-0.085;QD=22.76;ReadPosRankSum=3.897;VQSLOD=5.3991;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,31:32:50.66:649,51,0	1/1:1,1:10:16.73:107,17,0	0/0:26,0:19:19.54:0,20,191	0/0:27,1:18:4.29:0,4,101	1/1:6,0:36:62:306,62,0	1/1:2,0:34:65.17:321,65,0	1/1:2,0:22:22.62:110,23,0	1/1:9,33:42:95.27:1163,95,0	1/1:1,0:36:53.97:265,54,0	1/1:2,35:36:99:1228,99,0	1/1:4,34:38:21.53:828,22,0	1/1:3,31:34:72.23:916,72,0	1/1:4,29:33:66.21:840,66,0	1/1:4,25:29:57.18:725,57,0	0/0:37,0:37:90.31:0,90,1497	1/1:5,35:40:60.51:878,61,0	1/1:8,15:23:45.13:558,45,0	1/1:1,15:15:27.09:343,27,0	1/1:2,7:9:21.07:266,21,0	1/1:4,34:38:78.08:992,78,0	1/1:2,32:34:78.25:993,78,0	1/1:6,26:32:32.06:662,32,0	1/1:3,27:30:63.03:802,63,0	1/1:8,16:24:57.02:721,57,0	1/1:0,17:16:36.12:458,36,0	1/1:7,41:48:99:1445,117,0	1/1:3,23:26:60.19:764,60,0	1/1:3,18:20:45.14:573,45,0
chr10	32177677	.	A	ATG	9057.16	PASS	AB=0.697;AC=22;AF=0.393;AN=56;BaseQRankSum=-12.231;DP=848;FS=0.352;HRun=0;HaplotypeScore=129.5266;InbreedingCoeff=0.2875;MQ=58.97;MQ0=5;MQRankSum=0.665;QD=19.73;ReadPosRankSum=2.997;VQSLOD=4.9619;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:22,17:39:35.51:976,36,0	0/0:6,0:12:15.76:0,16,74	0/0:60,0:34:21.65:0,22,239	0/1:48,0:24:1.18:1,0,178	0/0:12,0:25:22.69:0,23,112	0/0:13,0:32:42.94:0,43,219	0/0:19,0:37:37.13:0,37,190	0/0:39,0:40:47.77:0,48,491	0/0:8,0:31:53.27:0,53,256	0/1:15,18:34:38.17:784,0,38	0/1:15,7:22:51.77:170,0,52	1/1:10,14:23:27.09:423,27,0	0/1:10,19:29:15.80:697,0,16	1/1:19,23:42:78.26:1189,78,0	0/0:34,0:35:72.05:0,72,818	1/1:8,26:35:26.03:1032,26,0	0/1:15,25:40:14.56:943,0,15	0/1:10,6:16:10.95:278,0,11	0/0:19,0:19:18.04:0,18,201	0/0:15,0:17:35.48:0,35,364	0/0:46,0:47:71.58:0,72,791	1/1:15,8:23:35.60:510,36,0	0/1:9,6:15:46.50:214,0,46	0/1:11,24:36:20.87:780,0,21	1/1:12,8:20:30.09:447,30,0	0/1:12,14:29:33.99:483,0,34	0/0:32,0:31:66.18:0,66,753	0/1:3,3:6:22.94:129,0,23
chr10	32178564	.	T	TTG	16206.92	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-6.920;DP=518;FS=6.260;HRun=0;HaplotypeScore=71.0678;InbreedingCoeff=0.9312;MQ=75.81;MQ0=3;MQRankSum=-4.988;QD=35.31;ReadPosRankSum=6.069;VQSLOD=7.0545;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,17:18:48.16:861,48,0	1/1:9,0:9:19.95:104,20,0	0/0:26,0:18:47.27:0,47,433	0/0:17,0:13:23.25:0,23,249	1/1:29,0:28:77.69:408,78,0	1/1:20,0:20:48.84:253,49,0	1/1:11,0:11:23:119,23,0	1/1:1,12:15:17.44:595,17,0	1/1:18,0:18:40.34:214,40,0	1/1:3,26:29:75.22:1260,75,0	1/1:0,23:23:48.16:842,48,0	1/1:0,14:14:42.14:754,42,0	1/1:1,21:22:51.17:914,51,0	1/1:3,15:19:45.15:779,45,0	0/0:16,0:16:42.08:0,42,534	1/1:2,16:18:33.11:592,33,0	1/1:1,21:22:60.21:1076,60,0	1/1:0,7:7:18.06:323,18,0	1/1:4,18:22:53.21:921,53,0	1/1:4,19:23:54.13:933,54,0	1/1:3,14:18:33.11:592,33,0	1/1:0,15:15:30:500,30,0	1/1:3,17:20:48.08:818,48,0	1/1:0,21:19:42.14:752,42,0	1/1:1,19:20:45.14:778,45,0	1/1:1,15:16:42.08:664,42,0	1/1:3,24:27:63.20:1100,63,0	1/1:0,1:1:3.01:54,3,0
chr10	32178566	.	G	GT	7931.66	PASS	AB=1.000;AC=48;AF=0.857;AN=56;BaseQRankSum=-0.080;DP=501;FS=5.019;HRun=5;HaplotypeScore=86.5989;InbreedingCoeff=0.6081;MQ=77.71;MQ0=3;MQRankSum=-4.267;QD=17.99;ReadPosRankSum=9.058;VQSLOD=3.5269;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:17:47.07:281,47,0	1/1:0,9:9:20.87:307,21,0	0/0:27,0:19:27.29:0,27,415	0/0:18,0:14:22.46:0,22,244	1/1:0,30:29:81.18:1155,81,0	1/1:0,21:21:51.17:746,51,0	1/1:0,11:11:24.08:351,24,0	0/1:16,0:16:41.48:163,0,41	1/1:1,18:19:42.14:614,42,0	1/1:27,0:27:30.91:392,31,0	1/1:21,0:21:47.17:309,47,0	1/1:14,0:14:41.19:246,41,0	1/1:21,0:21:49.96:298,50,0	1/1:16,0:17:20.44:252,20,0	0/0:15,0:15:44.88:0,45,531	1/1:17,0:17:0.30:159,0,0	1/1:22,0:22:58.82:352,59,0	1/1:7,0:7:17.63:105,18,0	1/1:18,1:20:52.08:315,52,0	1/1:20,0:20:13.67:256,14,0	1/1:17,0:17:32.36:194,32,0	0/1:15,0:14:12.38:126,0,12	1/1:16,1:17:32.03:246,32,0	1/1:20,0:18:41.14:245,41,0	1/1:20,0:19:10.50:210,10,0	1/1:16,0:16:41.33:267,41,0	1/1:26,0:26:17.64:325,18,0	1/1:1,0:1:2.94:18,3,0
chr10	32178691	.	A	AT	3421.70	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-11.621;DP=603;FS=2.368;HRun=8;HaplotypeScore=55.6046;InbreedingCoeff=0.9940;MQ=76.58;MQ0=0;MQRankSum=-0.178;QD=28.51;ReadPosRankSum=-1.551;VQSLOD=3.6521;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:54.02:0,54,494	0/0:17,0:17:48.02:0,48,439	0/0:18,0:17:35.02:0,35,302	0/0:8,0:8:14.80:0,15,121	0/0:26,0:26:72.04:0,72,659	0/0:23,0:23:60.03:0,60,549	0/0:13,0:13:39.02:0,39,357	1/1:4,17:20:51.14:578,51,0	0/0:10,0:10:18:0,18,165	0/0:34,0:34:84.02:0,84,764	0/0:28,0:28:75.02:0,75,681	0/0:16,0:16:45.02:0,45,412	0/0:30,0:30:90.05:0,90,823	0/0:15,0:15:45.02:0,45,412	0/0:19,0:19:54.03:0,54,494	0/0:28,0:28:75.03:0,75,686	0/0:38,0:38:99:0,111,1016	0/0:10,0:10:30.02:0,30,275	1/1:2,16:18:51.11:574,51,0	1/1:5,24:29:69.16:782,69,0	1/1:4,22:26:66.20:762,66,0	0/0:22,0:22:63.03:0,63,577	0/0:22,0:22:60.02:0,60,549	0/0:24,0:24:56.96:0,57,508	0/0:24,0:24:63.03:0,63,577	0/0:21,0:21:57.02:0,57,522	1/1:5,21:25:63.19:727,63,0	0/0:17,0:17:50.98:0,51,454
chr10	32179137	.	G	GT	5824.51	PASS	AB=0.567;AC=28;AF=0.500;AN=56;BaseQRankSum=-14.331;DP=565;FS=8.140;HRun=10;HaplotypeScore=73.9113;InbreedingCoeff=0.7962;MQ=83.81;MQ0=1;MQRankSum=-1.849;QD=21.41;ReadPosRankSum=1.933;VQSLOD=5.7583;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,13:15:11.45:327,11,0	0/0:6,0:8:14.93:0,15,117	0/0:25,0:28:14.42:0,14,179	0/0:17,0:18:0.58:0,1,118	0/0:38,0:38:99:0,99,810	0/0:15,0:17:46.97:0,47,372	0/0:22,0:22:50.89:0,51,414	0/0:5,0:32:51.58:0,52,170	0/0:13,1:15:6.01:0,6,245	1/1:5,17:22:29.50:519,29,0	1/1:6,12:18:11.34:310,11,0	1/1:4,15:19:23.48:454,23,0	1/1:5,18:23:48.12:509,48,0	1/1:2,9:11:26.43:264,26,0	0/0:24,0:24:62.85:0,63,506	1/1:5,17:22:17.46:392,17,0	0/1:6,11:18:10.20:305,0,10	1/1:3,11:15:11.66:298,12,0	0/0:2,0:15:26.48:0,26,77	0/0:3,0:37:66.73:0,67,204	0/0:0,0:16:32.59:0,33,94	1/1:4,13:17:36.05:372,36,0	1/1:3,14:17:11.48:327,11,0	1/1:1,16:17:20.57:423,21,0	0/1:2,13:16:7.35:324,0,7	1/1:5,29:34:65.51:873,66,0	0/0:2,0:22:36.35:0,36,106	1/1:0,6:6:12.03:128,12,0
chr10	32179951	.	T	TA	8676.10	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-11.375;DP=440;FS=7.586;HRun=8;HaplotypeScore=37.4594;InbreedingCoeff=0.9289;MQ=70.24;MQ0=0;MQRankSum=-1.659;QD=28.26;ReadPosRankSum=2.321;VQSLOD=4.9398;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,22:27:54.16:623,54,0	1/1:1,6:7:15.04:173,15,0	0/0:8,0:8:8.95:0,9,70	0/0:2,0:2:3:0,3,27	1/1:4,24:28:72.09:785,72,0	1/1:4,17:21:51.15:589,51,0	1/1:0,6:6:18.05:208,18,0	0/0:29,0:29:72.01:0,72,652	1/1:1,15:16:45.13:520,45,0	1/1:4,20:24:63.18:723,63,0	1/1:4,19:23:35.71:658,36,0	1/1:3,7:10:18.05:208,18,0	1/1:1,11:12:30.09:346,30,0	1/1:2,11:13:30.09:346,30,0	0/0:15,0:15:36.01:0,36,330	1/1:1,13:14:36.11:416,36,0	1/1:2,12:14:33.10:381,33,0	1/1:2,14:16:42.12:485,42,0	0/0:21,0:21:57.03:0,57,522	0/0:29,0:29:75.03:0,75,686	0/0:4,0:4:12.01:0,12,110	1/1:2,13:15:36.07:401,36,0	1/1:0,18:18:54.11:607,54,0	1/1:3,3:6:9.03:104,9,0	1/1:0,15:15:42.12:485,42,0	1/1:2,11:13:8.62:343,9,0	0/0:25,0:25:65.99:0,66,591	1/1:0,9:9:24.07:277,24,0
chr10	32183002	.	CT	C	16495.70	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-0.594;DP=537;FS=11.804;HRun=1;HaplotypeScore=62.3840;InbreedingCoeff=0.9944;MQ=74.85;MQ0=3;MQRankSum=0.610;QD=36.33;ReadPosRankSum=4.675;VQSLOD=4.3244;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,24:24:63.21:881,63,0	1/1:0,10:10:30.06:397,30,0	0/0:27,0:21:60.51:0,61,727	0/0:38,0:29:55.15:0,55,804	1/1:0,14:14:39.13:538,39,0	1/1:0,17:17:48.16:671,48,0	1/1:0,24:24:60.20:839,60,0	1/1:0,14:12:36.11:477,36,0	1/1:0,21:21:48.16:666,48,0	1/1:0,18:18:51.16:695,51,0	1/1:0,18:17:48.16:658,48,0	1/1:0,26:26:63.21:881,63,0	1/1:0,16:16:39.13:545,39,0	1/1:0,25:23:60.20:839,60,0	0/0:18,0:18:54.17:0,54,831	1/1:0,19:19:45.15:629,45,0	1/1:0,23:23:57.19:797,57,0	1/1:4,12:16:45.13:603,45,0	1/1:0,11:11:33.03:388,33,0	1/1:0,23:23:66.22:916,66,0	1/1:0,19:19:51.17:713,51,0	1/1:0,17:17:48.16:666,48,0	1/1:0,14:14:39.13:535,39,0	1/1:0,22:22:57.19:797,57,0	1/1:0,13:13:33.11:461,33,0	1/1:0,24:23:69.22:947,69,0	1/1:0,18:18:48.16:671,48,0	1/1:1,7:8:15.53:286,16,0
chr10	32183171	.	ACC	A	8078.11	PASS	AB=0.924;AC=36;AF=0.643;AN=56;BaseQRankSum=0.262;DP=558;FS=7.223;HRun=9;HaplotypeScore=84.2890;InbreedingCoeff=0.5692;MQ=67.44;MQ0=13;MQRankSum=0.495;QD=18.49;ReadPosRankSum=7.457;VQSLOD=2.5801;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,21:27:39.10:454,39,0	0/1:11,0:10:2.73:3,0,77	0/1:26,0:10:8.35:8,0,128	0/0:27,0:13:16.10:0,16,145	1/1:11,0:11:25.93:105,26,0	0/1:16,0:16:52.08:52,0,76	0/1:15,0:15:24.26:24,0,81	0/0:8,0:14:29.97:0,30,262	0/1:26,0:25:85.70:86,0,104	1/1:3,20:23:60.09:637,60,0	1/1:3,15:18:39.11:452,39,0	1/1:1,14:15:30.09:348,30,0	1/1:2,24:26:60.18:699,60,0	1/1:5,27:31:42.12:489,42,0	0/0:8,0:8:18.04:0,18,270	1/1:3,16:19:44.90:486,45,0	1/1:5,21:26:65.91:768,66,0	1/1:7,14:21:36.02:402,36,0	0/0:13,0:12:23.98:0,24,213	0/0:14,0:14:26.74:0,27,194	0/0:18,0:18:24.50:0,24,264	1/1:3,24:27:43.11:694,43,0	1/1:3,15:18:36.04:402,36,0	1/1:3,25:28:60.11:682,60,0	0/1:3,16:19:28.05:377,0,28	1/1:1,20:21:60.02:632,60,0	0/0:20,0:19:19.10:0,19,163	1/1:0,11:11:24.07:279,24,0
chr10	32183179	.	CCA	C	3193.03	PASS	AB=1.000;AC=32;AF=0.571;AN=56;BaseQRankSum=4.618;DP=590;FS=11.761;HRun=0;HaplotypeScore=105.5468;InbreedingCoeff=0.2276;MQ=66.78;MQ0=14;MQRankSum=1.369;QD=7.08;ReadPosRankSum=9.917;VQSLOD=0.7559;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:29:92.57:93,0,98	1/1:5,4:8:6.02:73,6,0	0/1:37,0:13:13.12:13,0,86	0/0:32,0:15:11.37:0,11,108	1/1:1,12:13:36.03:403,36,0	1/1:11,5:16:30.47:331,30,0	1/1:7,7:14:15.05:182,15,0	0/0:15,0:16:24.49:0,24,235	1/1:16,10:25:45.13:534,45,0	0/1:25,0:25:60.74:61,0,95	1/1:16,0:16:12.52:116,13,0	0/1:16,0:16:15.45:100,0,15	1/1:24,0:24:53.02:218,53,0	1/1:28,0:27:16.38:134,16,0	0/0:13,0:13:6.69:0,7,353	0/1:22,0:22:42.11:100,0,42	0/1:30,0:30:24.10:169,0,24	1/1:18,0:18:22.68:154,23,0	0/0:9,0:14:29.95:0,30,250	0/0:7,0:16:12:0,12,105	0/0:4,0:18:26.38:0,26,233	0/1:28,0:28:24.93:164,0,25	0/1:19,0:19:32.68:101,0,33	1/1:27,0:27:32.35:200,32,0	0/1:18,0:18:52.09:80,0,52	1/1:22,0:21:12.91:101,13,0	0/0:4,0:20:17.92:0,18,153	0/1:13,0:13:20.37:62,0,20
chr10	32183180	.	CA	C	300.74	PASS	AB=0.939;AC=8;AF=0.143;AN=56;BaseQRankSum=-2.936;DP=585;FS=1.793;HRun=1;HaplotypeScore=106.7784;InbreedingCoeff=0.1173;MQ=68.03;MQ0=14;MQRankSum=-0.442;QD=2.66;ReadPosRankSum=0.877;VQSLOD=-0.2837;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:54.59:0,55,327	0/1:10,0:8:9.48:9,0,41	0/0:39,0:14:33.10:0,33,232	0/0:35,0:16:31.09:0,31,249	1/1:12,1:13:31.98:143,32,0	0/1:14,2:16:64.17:90,0,64	0/1:13,1:14:26.93:27,0,79	0/1:16,0:16:39.60:40,0,188	0/1:20,6:25:70.42:117,0,70	0/0:25,0:25:73.56:0,74,501	0/0:16,0:16:40.17:0,40,222	0/0:16,0:16:30.76:0,31,176	0/0:24,0:24:56.81:0,57,302	0/0:30,0:29:48.07:0,48,279	0/0:13,0:13:7.17:0,7,306	0/0:22,0:22:41.73:0,42,310	0/0:30,0:30:75.08:0,75,428	0/1:18,0:18:14.52:15,0,153	0/0:16,2:15:28.04:0,28,246	0/0:14,0:11:11.66:0,12,83	0/0:15,0:15:23.42:0,23,124	0/0:28,0:28:55.67:0,56,380	0/0:19,0:19:29.02:0,29,224	0/0:27,0:27:46.56:0,47,301	0/0:18,0:18:40.92:0,41,277	0/0:22,0:21:61.50:0,62,381	0/0:18,0:15:13.71:0,14,48	0/0:13,0:13:28.88:0,29,166
chr10	32185156	.	G	GCA	20465.89	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-18.135;DP=754;FS=0.303;HRun=0;HaplotypeScore=82.9194;InbreedingCoeff=0.9957;MQ=70.50;MQ0=2;MQRankSum=-1.638;QD=40.53;ReadPosRankSum=5.899;VQSLOD=6.7825;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,45:49:99:1852,108,0	1/1:0,12:12:33.11:566,33,0	0/0:27,0:27:62.51:0,63,763	0/0:33,0:30:66.20:0,66,845	1/1:3,23:27:60.21:1029,60,0	1/1:2,36:37:87.30:1492,87,0	1/1:2,26:29:57.20:978,57,0	0/0:33,0:33:81.26:0,81,1064	1/1:3,21:24:60.21:1029,60,0	1/1:8,25:33:81.27:1366,81,0	1/1:2,21:22:57.20:977,57,0	1/1:1,22:24:54.18:926,54,0	1/1:1,26:27:75.26:1286,75,0	1/1:2,22:25:60.20:1010,60,0	0/0:33,0:33:90.28:0,90,1169	1/1:0,26:26:69.24:1182,69,0	1/1:2,16:19:48.16:823,48,0	1/1:1,6:7:12.97:254,13,0	0/0:19,0:19:48.13:0,48,613	0/0:36,0:36:99:0,99,1300	0/0:43,0:43:99:0,123,1538	1/1:2,17:19:39.13:669,39,0	1/1:6,21:27:60.21:1021,60,0	1/1:2,22:24:60.21:1029,60,0	1/1:1,25:26:60.21:1029,60,0	1/1:6,23:29:69.24:1176,69,0	0/0:25,0:25:66.21:0,66,867	1/1:0,17:17:45.15:772,45,0
chr10	32188195	.	TGTTCAAA	T	5562.91	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=13.438;DP=590;FS=2.735;HRun=0;HaplotypeScore=140.4909;InbreedingCoeff=0.9970;MQ=72.43;MQ0=0;MQRankSum=-12.455;QD=55.08;ReadPosRankSum=1.222;VQSLOD=5.1279;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:72.25:0,72,2805	1/1:1,10:12:30.10:776,30,0	0/0:14,0:14:39.13:0,39,1342	0/0:9,0:9:17.04:0,17,567	1/1:4,23:27:57.13:1388,57,0	1/1:4,19:23:48.16:1240,48,0	1/1:4,12:16:30.10:777,30,0	0/0:24,0:24:69.24:0,69,2500	1/1:2,21:23:54.19:1382,54,0	0/0:29,0:29:84.29:0,84,3270	0/0:24,0:24:69.24:0,69,2681	0/0:15,0:15:42.14:0,42,1656	0/0:22,0:22:63.22:0,63,2271	0/0:10,0:10:30.10:0,30,1182	0/0:19,0:19:57.20:0,57,2231	0/0:19,0:19:54.19:0,54,2092	0/0:18,0:18:51.18:0,51,1986	0/0:12,0:12:36.12:0,36,1403	0/0:21,0:21:57.19:0,57,2018	0/0:56,0:56:99:0,169,6551	0/0:15,0:15:45.15:0,45,1729	0/0:28,0:28:84.27:0,84,3205	0/0:31,0:31:93.29:0,93,3447	0/0:19,0:19:57.20:0,57,2144	0/0:13,0:13:39.12:0,39,1385	0/0:25,0:24:75.24:0,75,2895	0/0:32,0:32:93.32:0,93,3494	0/0:10,0:10:27.09:0,27,1026
chr10	32190960	.	CT	C	1767.94	PASS	AB=0.953;AC=33;AF=0.589;AN=56;BaseQRankSum=3.224;DP=439;FS=10.392;HRun=14;HaplotypeScore=64.6057;InbreedingCoeff=0.6597;MQ=67.60;MQ0=14;MQRankSum=-3.774;QD=7.82;ReadPosRankSum=1.720;VQSLOD=1.9052;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,7:13:20.72:141,21,0	0/1:4,0:4:2.09:2,0,72	0/0:47,0:16:1.25:0,1,90	0/0:43,0:14:8.66:0,9,38	0/0:24,1:25:14.16:0,14,372	0/0:15,0:15:26.70:0,27,237	0/0:8,0:8:13.22:0,13,86	0/1:23,2:24:5.14:5,0,229	0/1:13,1:14:8.41:8,0,160	1/1:3,10:14:40.52:265,41,0	1/1:8,7:14:27.17:182,27,0	1/1:4,2:6:9.32:52,9,0	1/1:10,5:14:21.07:120,21,0	1/1:10,2:12:17.82:92,18,0	0/0:9,0:8:11.97:0,12,103	1/1:7,4:11:16.87:106,17,0	1/1:7,4:10:17.82:122,18,0	1/1:5,6:11:0.10:131,0,0	0/0:13,0:14:4.08:0,4,149	0/0:19,1:20:16.02:0,16,243	0/0:7,0:7:9.88:0,10,80	1/1:9,1:11:16.25:100,16,0	1/1:6,6:11:23.71:160,24,0	1/1:5,4:10:16.43:95,16,0	1/1:12,6:18:8.93:182,9,0	1/1:7,3:11:0.62:89,1,0	0/0:22,0:23:26.66:0,27,286	1/1:6,5:10:17.57:113,18,0
chr10	32190984	.	CT	C	1835.36	PASS	AB=0.671;AC=26;AF=0.464;AN=56;BaseQRankSum=6.311;DP=399;FS=37.555;HRun=11;HaplotypeScore=55.6908;InbreedingCoeff=0.6345;MQ=65.67;MQ0=29;MQRankSum=-6.788;QD=11.06;ReadPosRankSum=1.859;VQSLOD=0.3937;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:9,6:9:11.31:48,0,11	0/0:4,0:4:12.03:0,12,128	0/0:47,2:22:19.40:0,19,142	0/0:41,0:12:6.87:0,7,37	0/0:20,0:22:48.46:0,48,545	0/0:15,0:15:45.11:0,45,480	0/0:4,0:3:9.02:0,9,96	0/0:21,0:20:49.01:0,49,514	0/0:12,0:11:27.07:0,27,288	1/1:7,13:18:44.92:366,45,0	1/1:2,10:11:20.85:172,21,0	1/1:1,4:5:5.99:49,6,0	1/1:3,9:10:20.96:172,21,0	0/1:3,6:8:11.02:127,0,11	0/0:6,0:6:18:0,18,179	1/1:4,2:4:5.99:49,6,0	1/1:8,4:9:8.96:74,9,0	1/1:6,6:9:17.95:148,18,0	0/0:10,0:12:29.89:0,30,277	0/0:21,0:21:51.03:0,51,520	0/0:3,0:3:6.02:0,6,64	1/1:1,4:5:8.99:74,9,0	0/1:4,8:11:7.75:148,0,8	0/1:7,3:7:46.03:74,0,46	1/1:8,10:14:29.95:246,30,0	1/1:1,9:10:26.96:222,27,0	0/0:18,1:17:14.45:0,14,359	1/1:5,2:6:8.99:74,9,0
chr10	32201661	.	AT	A	11715.10	PASS	AB=1.000;AC=31;AF=0.554;AN=56;BaseQRankSum=12.386;DP=553;FS=3.619;HRun=1;HaplotypeScore=55.3371;InbreedingCoeff=0.9318;MQ=69.85;MQ0=0;MQRankSum=0.032;QD=38.16;ReadPosRankSum=3.160;VQSLOD=5.4569;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,24:24:72.24:1007,72,0	0/0:14,0:14:42.14:0,42,668	0/0:5,0:5:12.04:0,12,174	0/1:8,0:7:8.76:9,0,222	0/0:29,0:29:87.28:0,87,1362	0/0:20,0:20:60.20:0,60,949	0/0:11,0:11:33.11:0,33,525	0/0:35,0:35:99:0,105,1597	0/0:17,0:17:51.17:0,51,815	1/1:0,34:34:99:1424,102,0	1/1:0,24:24:72.16:963,72,0	1/1:0,17:17:48.16:671,48,0	1/1:0,23:23:63.21:881,63,0	1/1:0,20:20:54.18:755,54,0	0/0:18,0:18:54.17:0,54,830	1/1:0,13:13:33.11:462,33,0	1/1:0,16:16:39.13:545,39,0	1/1:0,15:15:39.12:545,39,0	0/0:25,0:25:75.24:0,75,1177	0/0:33,0:33:99:0,99,1583	0/0:10,0:10:30.06:0,30,442	1/1:0,24:24:60.20:839,60,0	1/1:0,17:17:48.16:671,48,0	1/1:0,10:10:30.10:420,30,0	1/1:0,20:20:57.19:797,57,0	1/1:0,24:24:72.20:968,72,0	0/0:29,0:27:87.30:0,87,1391	1/1:0,18:18:54.18:755,54,0
chr10	32202622	.	TCTCCATGGCCTC	T	31160.26	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=19.432;DP=726;FS=8.951;HRun=0;HaplotypeScore=262.2375;InbreedingCoeff=0.9993;MQ=63.06;MQ0=0;MQRankSum=-20.838;QD=87.28;ReadPosRankSum=5.487;VQSLOD=2.9250;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,41:41:84.29:3158,84,0	0/0:16,0:16:48.16:0,48,2873	0/0:23,0:23:69.24:0,69,3727	0/0:29,0:28:78.27:0,78,3840	0/0:36,0:36:99:0,105,6524	0/0:27,0:27:78.27:0,78,4788	0/0:31,0:31:93.29:0,93,5215	0/0:29,0:29:84.29:0,84,4299	0/0:32,0:32:96.33:0,96,5431	1/1:0,27:27:81.15:2883,81,0	1/1:0,28:28:66.18:2405,66,0	1/1:0,26:26:72.25:2848,72,0	1/1:0,33:33:72.25:2848,72,0	1/1:0,25:25:60.21:2373,60,0	0/0:40,0:40:99:0,120,7383	1/1:0,31:31:75.26:2967,75,0	1/1:0,25:25:48.16:1771,48,0	1/1:0,16:16:39.13:1536,39,0	0/0:21,0:21:63.22:0,63,3471	0/0:30,0:30:90.31:0,90,5424	0/0:34,0:34:99:0,102,6249	1/1:0,20:20:41.89:1563,42,0	1/1:0,14:14:36.12:1424,36,0	1/1:1,22:23:27.19:1068,27,0	1/1:0,15:15:36.12:1379,36,0	1/1:0,21:21:63.10:2107,63,0	0/0:21,0:21:63.19:0,63,3686	1/1:0,12:12:21.07:831,21,0
chr10	32203947	.	TAA	T	15694.54	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=0.988;DP=446;FS=18.980;HRun=4;HaplotypeScore=66.1540;InbreedingCoeff=0.9724;MQ=70.49;MQ0=3;MQRankSum=-3.409;QD=39.04;ReadPosRankSum=3.245;VQSLOD=3.4349;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,21:21:57.19:815,57,0	1/1:1,3:4:9.03:132,9,0	0/0:16,0:15:33.11:0,33,573	0/0:10,0:9:18.06:0,18,333	1/1:1,20:21:46.16:867,46,0	1/1:1,22:23:60.20:869,60,0	1/1:0,15:15:45.15:654,45,0	1/1:2,32:34:96.31:1393,96,0	1/1:0,18:18:45.15:655,45,0	1/1:0,12:12:36.11:512,36,0	1/1:0,17:17:45.11:639,45,0	1/1:0,9:9:24.08:350,24,0	1/1:0,18:18:45.15:650,45,0	1/1:1,14:14:42.14:618,42,0	0/0:18,0:18:51.17:0,51,954	1/1:3,11:14:30.10:442,30,0	1/1:1,18:19:48.16:706,48,0	1/1:0,7:7:21.07:309,21,0	1/1:1,25:26:75.25:1104,75,0	1/1:1,15:15:39.13:574,39,0	1/1:0,10:10:21.07:301,21,0	1/1:0,10:10:30:392,30,0	1/1:0,10:10:30.10:442,30,0	1/1:0,20:20:54.18:754,54,0	1/1:1,13:14:33.11:486,33,0	1/1:0,18:18:51.17:748,51,0	1/1:0,15:15:39.13:574,39,0	1/1:0,16:16:48.16:707,48,0
chr10	32204013	.	AAG	A	1223.86	PASS	AB=0.947;AC=14;AF=0.250;AN=56;BaseQRankSum=-0.620;DP=542;FS=4.876;HRun=0;HaplotypeScore=145.4754;InbreedingCoeff=0.5208;MQ=47.41;MQ0=23;MQRankSum=4.175;QD=6.72;ReadPosRankSum=3.148;VQSLOD=3.1077;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:17:8.73:0,9,62	1/1:7,2:10:10.34:123,10,0	0/0:20,0:3:0.47:0,0,1	0/0:30,0:4:5.60:0,6,39	1/1:15,2:18:28.80:234,29,0	1/1:18,4:23:26.49:283,26,0	1/1:17,3:20:23.72:240,24,0	0/0:31,1:31:16.92:0,17,553	1/1:11,9:22:35.86:372,36,0	0/0:11,0:12:17.88:0,18,151	0/0:24,0:24:2.07:0,2,28	0/0:14,0:15:11.39:0,11,81	0/0:16,0:19:26.75:0,27,239	0/0:23,0:23:14.95:0,15,120	0/1:21,1:22:33.01:33,0,229	0/0:18,0:19:14.74:0,15,115	0/0:14,0:15:8.61:0,9,78	0/0:7,0:6:9.42:0,9,67	0/0:25,0:21:26.08:0,26,320	0/1:23,2:25:50.95:51,0,357	0/1:23,0:22:2.47:2,0,313	0/0:15,0:17:23.40:0,23,173	0/0:14,0:14:11.53:0,12,77	0/0:13,0:15:8.69:0,9,91	0/0:17,0:20:13.86:0,14,86	0/0:18,0:20:35.88:0,36,310	0/1:17,0:18:60.58:61,0,296	0/0:8,0:8:11.98:0,12,100
chr10	32204129	.	G	GTTT	4249.97	PASS	AB=0.748;AC=47;AF=0.839;AN=56;BaseQRankSum=0.890;DP=524;FS=6.830;HRun=14;HaplotypeScore=93.0707;InbreedingCoeff=0.0249;MQ=69.93;MQ0=2;MQRankSum=-1.950;QD=8.11;ReadPosRankSum=-3.419;VQSLOD=0.7552;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:32:14.32:216,14,0	1/1:3,1:11:6.34:62,6,0	1/1:15,0:9:0.34:3,0,0	0/1:16,0:12:1.27:1,0,57	1/1:8,20:32:40.81:376,41,0	1/1:22,1:26:34.94:427,35,0	1/1:8,3:19:9.03:147,9,0	1/1:14,17:32:56.86:578,57,0	1/1:19,1:23:52.61:619,53,0	1/1:16,0:25:14.44:96,14,0	1/1:15,0:19:17.25:120,17,0	1/1:3,0:18:12.81:46,13,0	0/1:4,0:11:0.22:0,0,26	1/1:6,0:21:9.03:32,9,0	0/1:19,0:20:5.71:6,0,314	0/1:6,0:14:8.44:95,0,8	0/1:9,0:18:8.60:65,0,9	1/1:5,0:15:5.99:49,6,0	1/1:12,1:20:28.95:271,29,0	1/1:3,11:17:25.12:250,25,0	1/1:6,7:15:6.91:94,7,0	0/1:10,0:13:17.45:130,0,17	1/1:7,0:14:6.71:29,7,0	0/1:10,0:17:30.67:125,0,31	0/1:9,0:16:10.66:57,0,11	1/1:7,0:22:17.94:69,18,0	1/1:1,10:12:15.05:262,15,0	0/1:3,0:8:19.26:24,0,19
chr10	32206097	.	GAAATGCACATCGTGCGC	G	36443.85	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=18.145;DP=619;FS=1.474;HRun=0;HaplotypeScore=336.9948;InbreedingCoeff=0.9650;MQ=75.40;MQ0=0;MQRankSum=-17.846;QD=92.73;ReadPosRankSum=8.917;VQSLOD=3.4433;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,26:33:66.23:3135,66,0	1/1:5,12:17:33.11:1658,33,0	0/0:24,0:24:72.23:0,72,3959	0/0:13,0:13:39.13:0,39,2622	1/1:4,24:28:51.14:2210,51,0	1/1:7,12:19:27.09:1347,27,0	1/1:6,7:13:18.06:904,18,0	0/0:34,0:34:99:0,102,6450	1/1:6,17:23:45.15:2261,45,0	1/1:6,22:28:63.22:2959,63,0	1/1:2,14:17:33.11:1544,33,0	1/1:5,20:25:48.16:2375,48,0	1/1:1,19:20:45.15:2247,45,0	1/1:6,19:25:51.17:2537,51,0	0/0:31,0:31:93.32:0,93,7317	1/1:5,15:20:42.14:2090,42,0	1/1:4,13:17:24.08:1206,24,0	1/1:3,6:9:15.05:754,15,0	0/0:22,0:22:66.23:0,66,4485	0/0:31,0:31:93.31:0,93,7080	0/0:21,0:21:63.22:0,63,4981	1/1:3,21:24:48.16:2185,48,0	1/1:2,10:12:24.08:1206,24,0	1/1:3,15:18:18.06:885,18,0	1/1:2,20:22:54.19:2620,54,0	1/1:4,17:21:48.13:2173,48,0	0/0:50,0:49:99:0,151,10706	1/1:0,2:2:3.01:151,3,0
chr10	32206775	.	A	AG	20644.40	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=15.697;DP=753;FS=0.000;HRun=2;HaplotypeScore=115.6677;InbreedingCoeff=0.9996;MQ=98.21;MQ0=1;MQRankSum=-6.032;QD=39.62;ReadPosRankSum=6.476;VQSLOD=3.7500;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,58:60:99:2375,166,0	1/1:0,13:13:36.12:518,36,0	0/0:44,0:43:99:0,114,1305	0/0:36,1:34:57.59:0,58,811	1/1:0,27:27:75.25:1080,75,0	1/1:0,21:21:60.20:862,60,0	1/1:1,27:28:72.24:1037,72,0	0/0:28,0:28:78.24:0,78,957	1/1:0,18:18:48.16:691,48,0	1/1:1,21:22:63.19:888,63,0	1/1:0,24:24:69.15:967,69,0	1/1:1,26:27:75.25:1080,75,0	1/1:0,34:34:99:1425,99,0	1/1:1,28:29:78.26:1120,78,0	0/0:30,0:30:90.26:0,90,1101	1/1:0,24:24:72.24:1034,72,0	1/1:1,33:33:99:1423,99,0	1/1:0,20:20:54.18:778,54,0	0/0:14,0:14:39.12:0,39,477	0/0:24,0:24:63.18:0,63,767	0/0:29,0:29:78.10:0,78,929	1/1:1,21:22:57.19:821,57,0	1/1:1,20:21:50.96:734,51,0	1/1:1,35:36:96.32:1382,96,0	1/1:1,20:22:54.16:757,54,0	1/1:1,30:31:93.31:1327,93,0	0/0:26,0:26:69.18:0,69,821	1/1:0,8:8:24.08:346,24,0
chr10	32207834	.	A	ATG	1189.23	PASS	AB=0.990;AC=23;AF=0.442;AN=52;BaseQRankSum=0.748;DP=645;FS=4.735;HRun=0;HaplotypeScore=143.2748;InbreedingCoeff=-0.1116;MQ=56.24;MQ0=22;MQRankSum=-3.539;QD=2.67;ReadPosRankSum=-0.769;VQSLOD=2.5290;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:29,3:32:15.88:141,0,16	0/0:13,0:12:2.60:0,3,10	1/1:46,0:15:0.89:2,1,0	./.	0/1:22,0:22:0.10:0,0,0	0/0:27,0:27:0.35:0,0,30	0/0:16,0:17:1.55:0,2,4	1/1:41,0:36:7.22:39,7,0	0/1:24,0:23:62.05:135,0,62	0/1:24,0:24:6.48:238,0,6	./.	1/1:27,0:26:9.03:103,9,0	1/1:23,0:23:9.10:63,9,0	0/1:15,0:15:21.96:64,0,22	0/0:13,0:14:20.89:0,21,216	0/1:18,0:19:24.48:24,0,35	0/1:20,1:20:29.28:48,0,29	0/0:12,0:12:11.21:0,11,106	0/0:18,0:17:3.98:0,4,18	0/1:20,0:20:11.15:41,0,11	0/1:32,0:30:23.12:24,0,23	0/1:15,0:16:16.99:57,0,17	0/0:17,0:17:6.01:0,6,63	1/1:28,1:29:5.68:80,6,0	0/1:20,0:20:26.05:52,0,26	0/1:20,0:20:60.04:224,0,60	0/1:14,0:13:0.95:1,0,23	0/0:10,0:10:8.25:0,8,54
chr10	32207858	.	GTGTGTGTGTC	G	3806.90	PASS	AB=1.000;AC=33;AF=0.589;AN=56;BaseQRankSum=2.403;DP=609;FS=10.081;HRun=0;HaplotypeScore=186.7280;InbreedingCoeff=-0.0541;MQ=48.42;MQ0=26;MQRankSum=-2.210;QD=7.28;ReadPosRankSum=-1.073;VQSLOD=1.2181;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:34,0:34:56.87:265,0,57	1/1:2,7:8:9.03:244,9,0	0/0:21,0:4:5.26:0,5,46	0/0:24,0:2:5.89:0,6,37	1/1:6,12:18:3.01:73,3,0	1/1:6,20:26:1.89:147,2,0	1/1:4,16:20:4.83:66,5,0	0/1:47,0:38:36.40:213,0,36	1/1:14,7:20:1.31:581,1,0	0/1:26,0:26:99:475,0,143	0/1:20,0:20:0:0,0,0	1/1:34,0:33:15.32:124,15,0	1/1:5,0:23:15.65:244,16,0	1/1:19,0:19:12.18:177,12,0	0/0:16,0:15:36.09:0,36,1113	1/1:15,0:15:15:253,15,0	0/1:20,0:19:47.80:96,0,48	0/1:12,0:12:23.83:24,0,110	0/1:16,0:13:24.79:25,0,45	0/1:19,0:19:17.70:18,0,140	0/1:39,0:36:90.18:90,0,322	0/1:15,0:15:2.23:36,0,2	0/0:12,0:12:5.81:0,6,70	1/1:27,0:27:6:53,6,0	0/1:31,0:31:20.28:67,0,20	0/1:21,0:21:31.97:474,0,32	0/0:13,0:12:20.91:0,21,281	0/1:11,0:11:39.56:62,0,40
chr10	32207862	.	GTGTGTCTGTGTGTGTGTC	G	6031.21	PASS	AB=0.732;AC=24;AF=0.429;AN=56;BaseQRankSum=-0.073;DP=586;FS=4.273;HRun=0;HaplotypeScore=224.0863;InbreedingCoeff=0.1809;MQ=47.77;MQ0=21;MQRankSum=-2.601;QD=16.08;ReadPosRankSum=-1.813;VQSLOD=3.5674;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:34,0:34:1:529,1,0	0/0:9,0:8:9.03:0,9,131	0/0:15,0:5:8.80:0,9,152	0/0:20,0:4:12.04:0,12,202	0/0:14,0:14:2.86:0,3,49	0/0:26,0:26:9.02:0,9,131	0/0:18,0:18:4.57:0,5,57	0/0:44,0:36:19.65:0,20,357	0/1:22,0:21:99:103,0,332	0/1:22,3:25:99:1162,0,127	0/1:6,14:20:0:0,0,0	1/1:8,23:32:15.51:355,16,0	1/1:23,0:23:16.62:507,17,0	1/1:7,13:20:23.67:635,24,0	0/0:17,0:16:39.13:0,39,1895	1/1:3,13:16:15.05:623,15,0	0/1:8,13:20:28.04:250,0,28	0/1:4,8:12:99:103,0,156	0/0:14,0:11:11.81:0,12,372	0/0:21,0:21:2.70:0,3,467	0/1:37,0:34:4.26:4,0,928	1/1:3,12:15:9:214,9,0	0/1:3,7:10:15.01:15,0,23	1/1:7,20:27:5.98:127,6,0	0/1:5,24:29:20.06:286,0,20	0/1:17,4:21:16.37:970,0,16	0/0:13,0:12:21.54:0,22,777	0/1:5,6:11:33.67:147,0,34
chr10	32207864	.	GTGTC	G	2621.89	PASS	AB=1.000;AC=36;AF=0.643;AN=56;BaseQRankSum=6.545;DP=578;FS=2.006;HRun=0;HaplotypeScore=153.7859;InbreedingCoeff=0.1797;MQ=47.82;MQ0=20;MQRankSum=-2.416;QD=5.33;ReadPosRankSum=0.761;VQSLOD=2.8622;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:37,0:37:3.58:255,4,0	1/1:9,0:8:8.82:67,9,0	0/1:16,0:6:1.87:2,0,89	0/0:19,0:5:14.91:0,15,129	1/1:14,0:14:2.94:18,3,0	1/1:26,0:26:7.48:55,7,0	1/1:17,0:17:5.72:30,6,0	1/1:41,0:33:37.28:375,37,0	1/1:21,0:21:24.19:214,24,0	0/1:24,0:24:68.60:297,0,69	0/1:19,0:19:0:0,0,0	1/1:31,0:32:6.45:64,6,0	1/1:23,0:23:20.14:131,20,0	0/1:20,0:20:41.82:65,0,42	0/0:16,0:15:39:0,39,597	1/1:16,0:16:11.32:87,11,0	0/1:21,0:20:26.01:47,0,26	0/1:12,0:12:1.43:1,0,73	0/1:15,0:11:10.89:72,0,11	1/1:19,1:20:11.11:123,11,0	1/1:38,0:35:38.24:356,38,0	0/0:15,0:15:2.68:0,3,12	0/0:9,0:9:5.66:0,6,72	0/0:27,0:27:0.72:0,1,2	0/1:27,0:27:11.04:38,0,11	0/1:19,0:19:40.56:211,0,41	1/1:10,3:12:18.92:228,19,0	0/1:11,0:11:9.89:50,0,10
chr10	32207866	.	GTC	G	3407.64	PASS	AB=0.966;AC=34;AF=0.607;AN=56;BaseQRankSum=5.482;DP=565;FS=1.305;HRun=0;HaplotypeScore=140.1203;InbreedingCoeff=0.2346;MQ=48.00;MQ0=20;MQRankSum=-0.765;QD=7.46;ReadPosRankSum=1.235;VQSLOD=3.5443;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:37,0:37:28.56:344,29,0	1/1:9,0:8:7.14:40,7,0	0/0:16,0:5:1.01:0,1,91	0/0:16,0:5:14.91:0,15,129	1/1:14,0:14:2.92:17,3,0	0/1:24,0:24:23.23:28,0,23	1/1:17,0:17:5.72:30,6,0	1/1:37,1:32:54.37:512,54,0	1/1:19,3:21:5.30:294,5,0	1/1:25,0:25:3.13:365,3,0	0/1:18,0:18:0:0,0,0	1/1:29,0:29:14.02:86,14,0	1/1:21,0:22:19.84:112,20,0	0/1:20,0:20:12.81:62,0,13	0/0:16,0:15:19.92:0,20,441	1/1:16,0:16:6.38:44,6,0	0/1:20,0:20:7.12:39,0,7	0/0:12,0:12:3.22:0,3,53	0/1:10,6:11:16.57:167,0,17	1/1:2,18:20:11.64:127,12,0	1/1:33,5:36:66.30:612,66,0	0/0:15,0:15:2.42:0,2,10	0/0:9,0:9:5.65:0,6,49	0/0:24,0:24:0.63:0,1,1	0/1:27,0:27:6.24:57,0,6	0/1:19,0:19:9.28:190,0,9	1/1:4,10:14:20.91:241,21,0	0/1:10,0:10:9.93:39,0,10
chr10	32208167	.	T	TCTCA	34831.87	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-7.317;DP=766;FS=4.515;HRun=0;HaplotypeScore=154.9259;InbreedingCoeff=0.9993;MQ=80.14;MQ0=0;MQRankSum=-8.051;QD=65.23;ReadPosRankSum=4.069;VQSLOD=6.9231;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,28:32:78.27:2078,78,0	1/1:2,14:16:42.14:1096,42,0	0/0:21,0:21:60.19:0,60,1094	0/0:24,0:24:60.18:0,60,1084	1/1:3,30:33:84.29:2259,84,0	1/1:0,28:32:81.28:2208,81,0	1/1:9,14:26:63.22:1633,63,0	0/0:29,0:29:84.74:0,85,1523	1/1:6,20:27:66.23:1804,66,0	1/1:4,29:35:96.29:2475,96,0	1/1:5,18:24:57.20:1436,57,0	1/1:8,21:31:60.21:1639,60,0	1/1:5,30:36:81.20:2201,81,0	1/1:4,27:34:78.27:2127,78,0	0/0:31,0:31:93.31:0,93,1769	1/1:3,26:30:78.27:2106,78,0	1/1:6,21:27:60.68:1631,61,0	1/1:3,15:20:48.16:1299,48,0	0/0:21,0:21:63.21:0,63,1156	0/0:28,0:28:78.27:0,78,1466	0/0:31,0:31:93.29:0,93,1679	1/1:6,24:32:81.28:2152,81,0	1/1:1,18:21:51.18:1364,51,0	1/1:3,18:21:41.83:1144,42,0	1/1:2,16:18:45.15:1204,45,0	1/1:2,27:30:90.31:2403,90,0	0/0:47,0:47:99:0,123,2126	1/1:1,8:9:21.07:574,21,0
chr10	32209114	.	T	TG	6106.17	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=11.513;DP=481;FS=0.000;HRun=1;HaplotypeScore=195.8155;InbreedingCoeff=0.9818;MQ=85.68;MQ0=0;MQRankSum=-12.450;QD=14.86;ReadPosRankSum=4.725;VQSLOD=4.8178;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:28:71.38:467,71,0	1/1:10,0:10:28.61:169,29,0	0/0:29,0:29:78.24:0,78,990	0/0:20,0:20:35.91:0,36,577	1/1:19,0:19:42.09:238,42,0	1/1:17,1:18:51.16:321,51,0	1/1:7,1:8:22.76:144,23,0	1/1:21,0:21:57.47:347,57,0	1/1:20,0:20:56.14:274,56,0	1/1:25,0:25:65.40:333,65,0	1/1:16,0:16:33.26:151,33,0	1/1:16,2:18:47.56:249,48,0	1/1:16,1:17:47.82:284,48,0	1/1:14,0:14:36.04:167,36,0	0/0:21,0:21:63.18:0,63,790	1/1:24,0:24:68.93:485,69,0	1/1:11,0:11:28.19:175,28,0	1/1:10,0:10:25.60:134,26,0	1/1:13,0:13:34.75:196,35,0	1/1:20,0:20:50.01:253,50,0	1/1:13,0:13:25.26:140,25,0	1/1:15,0:15:36.85:185,37,0	1/1:16,0:16:37.39:212,37,0	1/1:9,0:9:16.84:103,17,0	1/1:20,0:20:56.78:338,57,0	1/1:21,0:21:58.96:310,59,0	1/1:18,2:21:56.67:320,57,0	1/1:3,1:4:11.74:111,12,0
chr10	32209115	.	GCA	G	10510.32	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=11.825;DP=442;FS=0.498;HRun=0;HaplotypeScore=173.1812;InbreedingCoeff=0.9680;MQ=88.01;MQ0=0;MQRankSum=-12.334;QD=28.18;ReadPosRankSum=5.252;VQSLOD=5.6446;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,22:22:60.13:608,60,0	1/1:1,9:10:30.05:301,30,0	0/0:29,0:29:73.63:0,74,1568	0/0:19,0:19:48.24:0,48,928	1/1:2,15:17:42.66:395,43,0	1/1:1,16:17:51.11:533,51,0	1/1:1,5:6:18.01:170,18,0	1/1:1,18:19:54.12:551,54,0	1/1:1,19:20:60.13:606,60,0	1/1:0,22:22:66.15:677,66,0	1/1:0,16:16:36.06:348,36,0	1/1:2,16:18:51.08:497,51,0	1/1:2,15:17:51.04:487,51,0	1/1:0,13:13:39.07:380,39,0	0/0:21,0:21:63.19:0,63,1208	1/1:5,17:22:66.10:689,66,0	1/1:1,8:9:24.06:259,24,0	1/1:0,8:8:21.05:223,21,0	1/1:0,12:12:32.82:339,33,0	1/1:0,19:19:51.08:488,51,0	1/1:1,9:10:24.04:235,24,0	1/1:0,14:14:42.05:420,42,0	1/1:0,13:13:34.87:323,35,0	1/1:0,7:7:15.02:144,15,0	1/1:3,16:19:57.09:566,57,0	1/1:0,20:20:60.12:600,60,0	1/1:3,17:20:57.12:583,57,0	1/1:1,2:3:9.01:88,9,0
chr10	32209118	.	GGAACC	G	17400.22	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=10.523;DP=432;FS=0.494;HRun=0;HaplotypeScore=172.8147;InbreedingCoeff=0.9689;MQ=87.73;MQ0=0;MQRankSum=-12.524;QD=47.54;ReadPosRankSum=5.433;VQSLOD=4.9598;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,22:23:63.16:985,63,0	1/1:1,9:10:30.10:511,30,0	0/0:27,0:27:78.73:0,79,2417	0/0:20,0:20:60.20:0,60,1687	1/1:1,14:15:41.61:627,42,0	1/1:1,16:17:51.01:839,51,0	1/1:1,5:6:18.06:299,18,0	1/1:2,18:20:57.17:929,57,0	1/1:1,19:20:60.21:1025,60,0	1/1:0,22:22:66.23:1136,66,0	1/1:3,12:15:36.12:597,36,0	1/1:1,16:17:51.17:852,51,0	1/1:0,15:15:45.15:755,45,0	1/1:0,13:13:39.13:651,39,0	0/0:19,0:19:57.17:0,57,1748	1/1:4,17:21:63.18:1046,63,0	1/1:1,8:9:24.04:380,24,0	1/1:0,8:8:24.04:389,24,0	1/1:1,12:13:36.11:594,36,0	1/1:0,17:17:51.17:842,51,0	1/1:0,9:9:24.08:402,24,0	1/1:2,12:14:41.93:640,42,0	1/1:1,12:13:36.95:564,37,0	1/1:0,7:7:15.05:247,15,0	1/1:1,16:17:51.15:834,51,0	1/1:2,20:22:66.23:1125,66,0	1/1:2,18:20:57.20:981,57,0	1/1:1,2:3:9.03:149,9,0
chr10	32209120	.	AAC	A	4763.93	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=11.987;DP=422;FS=0.503;HRun=0;HaplotypeScore=189.6635;InbreedingCoeff=0.9436;MQ=88.22;MQ0=0;MQRankSum=-12.077;QD=13.34;ReadPosRankSum=6.031;VQSLOD=4.4507;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:22,1:23:53:260,53,0	1/1:10,0:10:26.45:127,26,0	0/0:27,0:27:71.50:0,72,1456	0/0:20,0:20:60.03:0,60,1090	1/1:15,0:15:33.96:168,34,0	1/1:18,0:18:45.58:226,46,0	1/1:5,0:5:14.20:70,14,0	1/1:20,0:20:49.54:241,50,0	1/1:19,1:20:56.98:305,57,0	1/1:22,0:22:62.58:311,63,0	1/1:12,0:12:34.09:168,34,0	1/1:17,0:17:45.92:224,46,0	1/1:15,0:15:42.61:210,43,0	1/1:13,0:13:36.93:182,37,0	0/0:18,0:18:54.17:0,54,1060	1/1:17,2:19:54.31:316,54,0	1/1:8,0:8:19.89:98,20,0	1/1:8,0:8:19.97:101,20,0	1/1:13,0:13:32.32:160,32,0	1/1:17,0:17:48.35:239,48,0	1/1:9,0:9:22.79:114,23,0	1/1:14,0:14:35.75:179,36,0	1/1:13,0:13:31.25:154,31,0	1/1:7,0:7:14.20:70,14,0	1/1:16,0:16:45.49:225,45,0	1/1:21,1:22:61.97:324,62,0	1/1:19,0:19:53.97:266,54,0	1/1:2,0:2:5.68:28,6,0
chr10	32209123	.	C	CTTGG	2869.43	PASS	AB=0.989;AC=23;AF=0.411;AN=56;BaseQRankSum=-9.224;DP=480;FS=1.008;HRun=0;HaplotypeScore=233.2070;InbreedingCoeff=-0.4753;MQ=85.41;MQ0=0;MQRankSum=-0.498;QD=7.82;ReadPosRankSum=-11.504;VQSLOD=-0.1594;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:23,1:24:33.97:182,0,34	0/1:10,0:10:21.11:35,0,21	0/0:26,0:26:72.72:0,73,1469	0/0:24,0:24:49.71:0,50,1067	0/1:16,0:16:46.01:97,0,46	0/1:21,0:21:42.08:156,0,42	0/1:7,0:7:12.57:115,0,13	0/1:31,0:30:16.66:488,0,17	0/1:22,1:23:47.98:191,0,48	0/1:27,0:27:50.82:60,0,51	0/0:12,0:12:23.85:0,24,75	0/0:17,0:17:29.93:0,30,91	0/0:15,0:15:27.67:0,28,85	0/1:14,0:14:30.53:31,0,49	0/0:17,0:17:51.16:0,51,1031	0/1:19,2:21:38.68:200,0,39	0/1:9,0:9:16.55:43,0,17	1/1:10,0:10:1.21:164,1,0	1/1:19,0:19:3.07:304,3,0	0/1:19,0:19:64.11:67,0,64	0/1:14,0:14:25.85:141,0,26	0/1:18,0:18:60.60:222,0,61	0/1:15,0:15:39.13:173,0,39	0/1:9,0:9:24.23:42,0,24	0/1:17,0:17:43.16:69,0,43	0/1:22,1:23:51.16:183,0,51	0/1:20,0:20:52.51:67,0,53	0/0:2,0:2:3.11:0,3,8
chr10	32209351	.	A	AT	4967.86	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-4.803;DP=640;FS=4.908;HRun=6;HaplotypeScore=138.6994;InbreedingCoeff=0.9984;MQ=80.24;MQ0=0;MQRankSum=0.217;QD=34.50;ReadPosRankSum=-1.149;VQSLOD=2.4699;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:69.15:0,69,702	0/0:13,0:13:39.09:0,39,398	0/0:18,0:18:39.03:0,39,384	0/0:17,0:17:39.03:0,39,379	0/0:28,0:28:72.16:0,72,735	0/0:22,0:22:63.14:0,63,643	0/0:16,0:16:45.09:0,45,452	1/1:2,25:27:75.21:916,75,0	0/0:23,0:23:57.12:0,57,582	0/0:35,0:35:99:0,102,1021	0/0:25,0:25:66.14:0,66,673	0/0:14,0:14:39.09:0,39,398	0/0:10,0:10:24.05:0,24,244	0/0:23,0:23:69.16:0,69,702	0/0:27,0:27:78.17:0,78,795	0/0:28,0:28:81.18:0,81,826	0/0:18,0:18:45.10:0,45,459	0/0:15,0:15:42.09:0,42,428	1/1:3,16:19:51.16:642,51,0	1/1:1,47:48:99:1774,141,0	1/1:0,7:7:21.07:264,21,0	0/0:26,0:26:72.15:0,72,728	0/0:33,0:33:87.20:0,87,887	0/0:15,0:15:42.09:0,42,429	0/0:33,0:33:93.19:0,93,940	0/0:18,0:18:48.09:0,48,482	1/1:5,38:43:99:1372,111,0	0/0:14,0:14:32.75:0,33,336
chr10	32211771	.	C	CT	21147.51	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-3.703;DP=628;FS=13.836;HRun=2;HaplotypeScore=86.0560;InbreedingCoeff=0.9991;MQ=91.64;MQ0=0;MQRankSum=-8.172;QD=38.17;ReadPosRankSum=4.143;VQSLOD=4.0700;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,27:28:69.23:988,69,0	1/1:0,14:14:42.14:600,42,0	0/0:30,0:30:74.22:0,74,782	0/0:20,0:20:24.27:0,24,418	1/1:0,26:26:75.21:1046,75,0	1/1:0,25:25:72.24:1036,72,0	1/1:3,16:19:42.14:605,42,0	1/1:1,29:30:84.24:1154,84,0	1/1:0,21:21:60.20:864,60,0	1/1:2,23:25:69.17:951,69,0	1/1:2,18:20:51.17:730,51,0	1/1:0,18:18:48.16:691,48,0	1/1:0,33:33:84.28:1209,84,0	1/1:1,29:30:81.27:1166,81,0	0/0:24,0:24:72.20:0,72,867	1/1:0,17:17:48.16:691,48,0	1/1:2,17:19:51.12:710,51,0	1/1:1,16:17:48.16:691,48,0	1/1:0,14:14:42.14:605,42,0	1/1:0,33:32:93.22:1292,93,0	1/1:1,21:22:54.18:777,54,0	1/1:1,27:28:69.04:918,69,0	1/1:0,22:22:63.17:883,63,0	1/1:3,15:18:39.13:561,39,0	1/1:1,20:21:60.20:858,60,0	1/1:0,20:20:60.16:809,60,0	1/1:1,23:24:63.10:880,63,0	1/1:0,10:10:30.10:432,30,0
chr10	32213239	.	T	TAA	3077.89	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-11.316;DP=662;FS=5.866;HRun=9;HaplotypeScore=74.0857;InbreedingCoeff=0.9977;MQ=78.23;MQ0=2;MQRankSum=-3.266;QD=29.60;ReadPosRankSum=0.262;VQSLOD=3.7279;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:51.13:0,51,543	1/1:3,9:12:18.06:277,18,0	0/0:16,0:16:29.92:0,30,310	0/0:21,0:20:42.02:0,42,417	1/1:7,20:27:57.16:851,57,0	1/1:2,18:19:45.15:693,45,0	1/1:4,15:19:42.14:647,42,0	0/0:36,0:36:89.24:0,89,953	1/1:2,22:24:51.17:785,51,0	0/0:38,0:38:99:0,102,1084	0/0:15,0:15:36.03:0,36,363	0/0:17,0:17:42.07:0,42,431	0/0:25,0:25:72.16:0,72,758	0/0:20,0:20:54.13:0,54,575	0/0:35,0:35:99:0,99,1030	0/0:22,0:22:66.14:0,66,687	0/0:21,0:21:54.09:0,54,557	0/0:12,0:12:30.03:0,30,309	0/0:20,0:20:48.11:0,48,511	0/0:34,0:34:93.15:0,93,969	0/0:14,0:14:36.06:0,36,375	0/0:24,0:24:69.16:0,69,727	0/0:27,0:27:63.11:0,63,662	0/0:24,0:24:72.16:0,72,758	0/0:35,0:35:81.15:0,81,862	0/0:28,0:28:72.18:0,72,822	0/0:44,0:43:99:0,120,1248	0/0:10,0:10:30.08:0,30,319
chr10	32213484	.	A	ATG	14093.75	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-18.627;DP=766;FS=0.578;HRun=0;HaplotypeScore=80.7237;InbreedingCoeff=0.9999;MQ=82.60;MQ0=0;MQRankSum=-2.720;QD=53.39;ReadPosRankSum=4.918;VQSLOD=5.6638;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,20:20:57.20:1101,57,0	0/0:17,0:17:45.15:0,45,689	0/0:25,0:25:75.25:0,75,1141	0/0:17,0:17:41.52:0,42,612	0/0:27,0:27:75.23:0,75,1124	0/0:31,0:30:93.32:0,93,1424	0/0:31,0:31:93.32:0,93,1422	0/0:42,0:42:99:0,120,1836	0/0:34,0:34:99:0,102,1498	0/0:40,0:40:99:0,120,1838	0/0:27,0:27:78.26:0,78,1195	1/1:0,30:30:81.28:1565,81,0	1/1:3,23:26:69.24:1326,69,0	1/1:2,28:31:84.29:1622,84,0	0/0:42,0:42:99:0,126,1908	0/0:15,0:15:42.14:0,42,640	1/1:1,22:23:60.21:1159,60,0	1/1:1,15:16:48.16:921,48,0	0/0:24,0:24:63.21:0,63,946	0/0:29,0:29:87.30:0,87,1331	0/0:22,0:22:66.22:0,66,1009	1/1:1,32:33:90.31:1715,90,0	1/1:0,18:18:51.17:985,51,0	1/1:0,26:26:75.26:1448,75,0	0/0:35,0:35:99:0,105,1585	1/1:1,30:31:87.30:1672,87,0	0/0:44,0:44:99:0,132,1952	1/1:0,10:10:30.10:579,30,0
chr10	32214701	.	T	TA	1627.50	PASS	AB=0.914;AC=12;AF=0.214;AN=56;BaseQRankSum=-3.884;DP=339;FS=14.278;HRun=9;HaplotypeScore=43.4203;InbreedingCoeff=0.7941;MQ=58.16;MQ0=3;MQRankSum=-1.776;QD=16.61;ReadPosRankSum=-2.447;VQSLOD=1.6718;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:6:12:0,12,104	0/0:7,0:7:17.99:0,18,156	0/0:12,0:8:3.51:0,4,110	0/0:6,0:4:11.92:0,12,94	0/0:20,0:20:38.96:0,39,338	0/0:10,0:10:29.99:0,30,260	0/0:9,0:9:23.98:0,24,208	1/1:9,16:25:45.12:497,45,0	0/0:10,0:10:23.98:0,24,208	0/0:10,0:10:29.99:0,30,260	0/0:18,0:18:47.97:0,48,414	0/0:10,0:9:26.99:0,27,234	0/0:7,0:7:21:0,21,182	0/0:12,0:12:26.99:0,27,234	0/1:8,1:9:9.19:9,0,158	0/0:6,0:6:14.99:0,15,130	0/0:17,0:17:47.98:0,48,417	0/0:17,0:16:41.99:0,42,365	1/1:7,9:15:38.94:384,39,0	1/1:3,8:11:27.04:286,27,0	1/1:1,5:8:20.72:194,21,0	0/0:8,0:8:24:0,24,208	0/0:17,0:17:44.99:0,45,391	0/0:6,0:6:17.98:0,18,153	0/0:16,0:16:35.97:0,36,313	0/0:17,0:17:41.98:0,42,365	1/1:3,13:16:39.11:431,39,0	0/1:12,1:13:0.19:0,0,227
chr10	32214772	.	GT	G	2030.18	PASS	AB=0.862;AC=13;AF=0.232;AN=56;BaseQRankSum=8.047;DP=426;FS=14.021;HRun=11;HaplotypeScore=49.0927;InbreedingCoeff=0.6824;MQ=78.03;MQ0=0;MQRankSum=-3.210;QD=12.53;ReadPosRankSum=-1.395;VQSLOD=1.2707;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:8:23.95:0,24,238	0/0:6,0:6:18.05:0,18,191	0/0:16,0:15:2.92:0,3,95	0/0:14,0:14:19.42:0,19,204	0/0:12,0:12:24.06:0,24,256	0/0:13,0:13:8.69:0,9,294	0/0:8,0:8:21.04:0,21,215	1/1:5,26:31:74.82:601,75,0	0/0:11,1:12:5.45:0,5,255	0/0:13,0:13:33.08:0,33,352	0/0:15,0:15:27.07:0,27,288	0/1:18,2:20:0.36:0,0,363	0/0:7,0:7:15.04:0,15,160	0/0:13,0:13:33.08:0,33,351	0/0:19,0:19:47.95:0,48,482	0/0:16,0:16:45.10:0,45,472	0/0:20,0:21:50.94:0,51,511	0/1:14,2:16:10.18:10,0,312	1/1:4,17:22:53.84:425,54,0	1/1:2,21:23:56.92:467,57,0	1/1:1,10:11:23.93:191,24,0	0/0:13,0:13:30.05:0,30,305	0/0:13,0:13:30.07:0,30,317	0/1:11,4:15:53.46:53,0,304	0/0:15,0:15:27.54:0,28,289	0/0:20,0:21:45.03:0,45,448	1/1:3,21:24:56.74:460,57,0	0/0:8,0:8:21.05:0,21,221
chr10	32216723	.	T	TTG	4872.91	PASS	AB=0.650;AC=40;AF=0.714;AN=56;BaseQRankSum=-4.632;DP=504;FS=51.799;HRun=0;HaplotypeScore=64.8253;InbreedingCoeff=0.1000;MQ=53.60;MQ0=14;MQRankSum=1.589;QD=10.59;ReadPosRankSum=5.173;VQSLOD=2.5943;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:6,20:30:12.36:291,0,12	1/1:0,2:2:6.02:89,6,0	0/0:13,0:8:11.28:0,11,62	0/0:13,0:6:2.93:0,3,23	1/1:2,9:13:23.95:317,24,0	1/1:2,24:29:23.89:313,24,0	1/1:9,6:13:14.50:151,15,0	1/1:15,1:36:44.37:615,44,0	1/1:18,2:20:21.61:294,22,0	1/1:5,14:19:15.79:162,16,0	0/1:7,8:17:9.56:167,0,10	0/1:8,12:20:28.38:50,0,28	1/1:11,0:10:13.72:112,14,0	0/1:4,9:16:11.26:85,0,11	0/0:18,0:18:45.19:0,45,425	1/1:1,9:11:11.96:174,12,0	1/1:14,0:11:7.01:131,7,0	0/1:13,1:18:13.03:154,0,13	0/1:8,9:17:42.07:184,0,42	0/1:11,2:21:36.79:131,0,37	0/1:8,1:8:2.44:94,0,2	1/1:4,10:20:22.81:243,23,0	1/1:3,13:23:35.01:374,35,0	1/1:9,9:16:10.70:156,11,0	0/1:4,15:21:3.34:176,0,3	0/1:9,9:18:3.95:152,0,4	1/1:6,10:16:15.51:145,16,0	1/1:2,2:8:8.94:113,9,0
chr10	32217148	.	TA	T	3166.84	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=13.717;DP=588;FS=3.064;HRun=3;HaplotypeScore=63.0561;InbreedingCoeff=0.9688;MQ=83.40;MQ0=0;MQRankSum=-0.547;QD=31.05;ReadPosRankSum=-0.740;VQSLOD=3.0922;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:51.17:0,51,734	0/0:12,0:12:36.12:0,36,516	0/0:19,0:19:51.13:0,51,685	0/0:16,0:16:44.88:0,45,562	0/0:29,0:29:87.20:0,87,1191	0/0:45,0:45:99:0,132,1864	0/0:17,0:17:51.16:0,51,718	1/1:0,25:25:75.21:903,75,0	0/0:15,0:15:42.12:0,42,567	0/0:25,0:25:75.25:0,75,1077	0/0:19,0:19:57.17:0,57,786	0/0:18,0:18:54.18:0,54,777	0/0:33,0:33:96.31:0,96,1360	0/0:20,0:20:54.18:0,54,777	0/0:21,0:21:60.20:0,60,863	0/0:24,0:24:63.20:0,63,889	0/0:26,0:26:75.25:0,75,1075	0/0:15,0:15:39.13:0,39,561	1/1:1,17:18:51.16:632,51,0	1/1:0,26:25:69.18:838,69,0	1/1:0,4:4:12.04:149,12,0	0/0:22,0:22:66.09:0,66,922	0/0:17,0:17:48.16:0,48,691	0/0:15,0:15:45.11:0,45,625	0/0:28,0:28:81.25:0,81,1141	0/0:30,0:30:84.23:0,84,1172	1/1:4,25:29:66.21:818,66,0	0/0:3,0:3:6.02:0,6,86
chr10	32220945	.	AGATAGATAGATAGATAGATAGAT	A	4352.67	PASS	AB=1.000;AC=38;AF=0.679;AN=56;BaseQRankSum=0.932;DP=578;FS=4.919;HRun=0;HaplotypeScore=336.5191;InbreedingCoeff=0.6065;MQ=46.73;MQ0=13;MQRankSum=0.828;QD=11.51;ReadPosRankSum=-6.220;VQSLOD=1.5829;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:33,0:33:2.48:45,2,0	1/1:8,0:8:3.01:117,3,0	0/0:3,0:1:3.01:0,3,42	0/0:6,0:3:9.03:0,9,133	1/1:25,0:25:9.03:178,9,0	1/1:19,0:19:8.95:89,9,0	1/1:13,0:10:7.57:86,8,0	0/0:43,0:40:75.26:0,75,1935	0/1:28,0:27:66.50:66,0,442	1/1:22,0:21:33.11:769,33,0	1/1:16,0:16:9.03:138,9,0	1/1:16,0:16:3.01:86,3,0	1/1:19,0:19:12.03:247,12,0	1/1:22,0:22:15.05:350,15,0	0/0:37,0:37:93.32:0,93,5547	1/1:19,0:19:15.05:251,15,0	1/1:18,0:18:6.02:92,6,0	0/1:19,0:19:99:139,0,113	0/0:26,0:24:51.60:0,52,2809	0/0:32,0:32:72.25:0,72,4648	0/0:24,0:23:45.15:0,45,2687	1/1:19,0:19:3.01:46,3,0	1/1:18,0:18:6:69,6,0	1/1:11,0:11:5.78:141,6,0	1/1:18,0:18:15.03:276,15,0	1/1:10,15:22:38.40:856,38,0	0/0:29,0:29:78.20:0,78,4603	1/1:10,0:10:15.05:312,15,0
chr10	32220965	.	AGAT	A	5862.70	PASS	AB=0.808;AC=38;AF=0.679;AN=56;BaseQRankSum=-4.338;DP=510;FS=2.390;HRun=0;HaplotypeScore=139.1748;InbreedingCoeff=0.8105;MQ=53.97;MQ0=9;MQRankSum=2.656;QD=20.57;ReadPosRankSum=-2.746;VQSLOD=4.5043;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:17:8.37:137,8,0	1/1:8,0:8:12.81:226,13,0	0/0:16,0:12:36.12:0,36,490	0/0:14,0:10:21.05:0,21,243	1/1:13,0:13:15.05:229,15,0	1/1:12,0:12:15.05:229,15,0	1/1:12,0:9:15.05:229,15,0	0/0:37,0:36:99:0,108,1416	0/1:22,0:21:44.07:297,0,44	1/1:19,0:18:54.10:753,54,0	1/1:14,0:14:27.09:413,27,0	1/1:12,0:12:18.06:275,18,0	1/1:20,0:20:18.06:273,18,0	1/1:16,0:16:18.81:293,19,0	0/0:39,0:39:99:0,105,1859	1/1:10,0:10:15.05:229,15,0	1/1:13,0:13:8.85:137,9,0	0/1:6,10:16:3.15:116,0,3	0/0:27,0:26:57.07:0,57,1085	0/0:32,0:32:87.28:0,87,1486	0/0:28,0:27:72.23:0,72,1145	1/1:18,0:18:24.08:367,24,0	1/1:11,0:11:21.07:321,21,0	1/1:10,0:10:6.78:134,7,0	1/1:12,0:12:21.07:321,21,0	1/1:18,0:15:33.16:467,33,0	0/0:31,0:31:90.30:0,90,1535	1/1:12,0:12:28.34:415,28,0
chr10	32220968	.	T	TA	5782.14	PASS	AB=0.733;AC=38;AF=0.679;AN=56;BaseQRankSum=-4.615;DP=515;FS=3.569;HRun=1;HaplotypeScore=123.0022;InbreedingCoeff=0.8133;MQ=54.56;MQ0=9;MQRankSum=0.007;QD=20.01;ReadPosRankSum=-0.623;VQSLOD=4.8110;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,16:18:8.97:132,9,0	1/1:2,8:10:12.81:216,13,0	0/0:18,0:12:36.12:0,36,489	0/0:17,0:13:26.99:0,27,291	1/1:0,14:14:15.05:220,15,0	1/1:0,12:12:15.05:220,15,0	1/1:3,10:10:15.05:220,15,0	0/0:39,0:38:99:0,111,1416	0/1:6,15:20:15.02:309,0,15	1/1:1,18:18:54.18:801,54,0	1/1:0,14:14:27.09:396,27,0	1/1:0,13:13:18.06:264,18,0	1/1:1,17:19:18.06:266,18,0	1/1:1,15:16:19.07:309,19,0	0/0:39,0:39:99:0,105,1468	1/1:0,10:10:15.05:222,15,0	1/1:0,14:14:8.72:131,9,0	0/1:13,2:15:3.29:116,0,3	0/0:24,1:24:23.50:0,24,859	0/0:30,0:30:87.28:0,87,1199	0/0:28,0:27:75.23:0,75,1028	1/1:0,18:18:24.08:352,24,0	1/1:0,11:11:21.07:308,21,0	1/1:1,9:10:6.74:128,7,0	1/1:1,11:12:21.07:307,21,0	1/1:18,0:15:33.47:467,33,0	0/0:30,0:30:90.30:0,90,1254	1/1:1,11:12:28.34:400,28,0
chr10	32221096	.	GCT	G	1545.11	PASS	AB=0.900;AC=36;AF=0.720;AN=50;BaseQRankSum=3.307;DP=606;FS=27.025;HRun=0;HaplotypeScore=79.8827;InbreedingCoeff=0.2555;MQ=64.03;MQ0=12;MQRankSum=2.417;QD=3.59;ReadPosRankSum=3.129;VQSLOD=0.3520;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:22,6:29:5.85:46,6,0	1/1:3,0:3:2.98:22,3,0	./.	./.	1/1:20,0:20:5.80:45,6,0	1/1:15,2:17:4.42:35,4,0	0/1:21,3:24:59:111,0,59	0/0:44,0:43:8.96:0,9,79	0/1:20,2:24:32.29:66,0,32	1/1:15,3:17:5.12:52,5,0	1/1:15,3:18:2.87:32,3,0	1/1:12,4:16:12.03:129,12,0	0/1:25,3:28:20.27:173,0,20	1/1:12,7:19:12.02:129,12,0	0/1:29,2:32:48.32:48,0,259	1/1:15,1:18:11.86:110,12,0	1/1:12,6:18:9.02:96,9,0	0/1:16,3:19:21.12:114,0,21	0/0:28,0:28:15.02:0,15,167	0/1:20,0:19:0:0,0,0	0/0:35,0:33:15.04:0,15,186	1/1:14,0:14:3:32,3,0	1/1:19,0:18:2.99:32,3,0	1/1:9,8:18:23.89:239,24,0	1/1:18,2:22:13.95:117,14,0	1/1:28,3:32:7.11:75,7,0	0/0:16,0:20:24.04:0,24,272	./.
chr10	32221429	.	GACTTCT	G	6575.87	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=14.674;DP=722;FS=4.226;HRun=0;HaplotypeScore=150.7395;InbreedingCoeff=0.9923;MQ=76.16;MQ0=1;MQRankSum=-12.925;QD=44.13;ReadPosRankSum=0.021;VQSLOD=4.4963;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:87.30:0,87,2935	0/0:9,0:9:24.08:0,24,794	0/0:27,0:26:51.07:0,51,1533	0/0:30,0:30:60.21:0,60,1880	0/0:29,0:29:78.27:0,78,2561	0/0:25,0:25:72.25:0,72,2416	0/0:45,0:45:99:0,120,4123	1/1:12,21:33:63.20:1349,63,0	0/0:22,0:22:66.21:0,66,2162	0/0:34,0:34:93.32:0,93,3165	0/0:34,0:34:93.31:0,93,3051	0/0:18,0:18:51.18:0,51,1759	0/0:17,0:17:48.16:0,48,1633	0/0:28,0:28:81.28:0,81,2762	0/0:32,0:32:93.32:0,93,3165	0/0:31,0:31:87.28:0,87,2818	0/0:16,0:16:45.15:0,45,1551	0/0:16,0:16:45.15:0,45,1551	1/1:7,19:26:57.20:1254,57,0	1/1:0,31:31:78.27:1750,78,0	1/1:5,9:14:12.04:269,12,0	0/0:19,0:19:54.19:0,54,1830	0/0:29,0:29:78.22:0,78,2474	0/0:18,0:18:48.06:0,48,1389	0/0:24,0:24:63.17:0,63,2088	0/0:24,0:24:69.24:0,69,2362	1/1:9,36:44:87.30:1953,87,0	0/0:13,0:13:36.12:0,36,1241
chr10	32221761	.	CT	C	4516.95	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=14.882;DP=747;FS=11.036;HRun=1;HaplotypeScore=86.0708;InbreedingCoeff=0.9999;MQ=93.41;MQ0=0;MQRankSum=-7.730;QD=38.61;ReadPosRankSum=0.912;VQSLOD=4.6037;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,129,2031	0/0:13,0:13:39.13:0,39,621	0/0:38,0:38:99:0,114,1728	0/0:37,0:37:99:0,111,1713	0/0:41,0:41:99:0,123,1965	0/0:23,0:23:69.24:0,69,1099	0/0:24,0:24:72.25:0,72,1146	1/1:0,25:25:72.15:945,72,0	0/0:19,0:19:57.13:0,57,803	0/0:24,0:24:72.24:0,72,1128	0/0:38,0:38:99:0,111,1750	0/0:32,0:32:96.30:0,96,1485	0/0:25,0:25:75.26:0,75,1189	0/0:34,0:34:99:0,102,1607	0/0:34,0:34:99:0,102,1627	0/0:26,0:26:78.27:0,78,1242	0/0:16,0:16:45.10:0,45,645	0/0:13,0:13:39.13:0,39,604	1/1:0,14:14:42.11:564,42,0	1/1:0,34:34:96.28:1297,96,0	1/1:0,15:15:45.15:627,45,0	0/0:31,0:31:93.27:0,93,1395	0/0:29,0:29:87.30:0,87,1386	0/0:25,0:25:72.16:0,72,1071	0/0:26,0:26:78.27:0,78,1247	0/0:26,0:26:78.25:0,78,1223	1/1:1,28:29:78.15:1084,78,0	0/0:13,0:13:39.10:0,39,576
chr10	32222418	.	A	AT	5350.61	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=5.637;DP=663;FS=3.777;HRun=1;HaplotypeScore=72.6795;InbreedingCoeff=0.9997;MQ=84.89;MQ0=0;MQRankSum=-3.474;QD=39.93;ReadPosRankSum=-1.294;VQSLOD=4.9789;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,99,1255	0/0:12,0:12:36.07:0,36,447	0/0:23,0:23:66.20:0,66,844	0/0:22,0:22:63.09:0,63,715	0/0:30,0:30:90.28:0,90,1144	0/0:18,0:18:51.14:0,51,646	0/0:15,0:15:45.11:0,45,553	1/1:0,31:31:90.21:1242,90,0	0/0:21,0:21:63.20:0,63,817	0/0:22,0:22:66.21:0,66,853	0/0:20,0:20:57.03:0,57,685	0/0:30,0:30:87.25:0,87,1088	0/0:24,0:24:66.21:0,66,854	0/0:25,0:25:72.19:0,72,900	0/0:25,0:25:72.20:0,72,893	0/0:23,0:23:69.22:0,69,895	0/0:27,0:27:78.19:0,78,952	0/0:14,0:14:42.12:0,42,529	1/1:2,15:17:45.11:632,45,0	1/1:5,22:27:72.21:1053,72,0	1/1:0,24:24:66.22:988,66,0	0/0:27,0:27:81.25:0,81,1036	0/0:35,0:35:96.29:0,96,1213	0/0:15,0:15:45.13:0,45,570	0/0:23,0:23:69.22:0,69,894	0/0:33,0:33:99:0,99,1247	1/1:3,32:35:99:1436,99,0	0/0:9,0:9:27.07:0,27,335
chr10	32222500	.	C	CAGTTGCTCCTG	14055.49	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-3.583;DP=617;FS=7.552;HRun=0;HaplotypeScore=190.9104;InbreedingCoeff=0.9974;MQ=94.44;MQ0=0;MQRankSum=-12.910;QD=144.90;ReadPosRankSum=-1.923;VQSLOD=5.0160;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,126,4468	0/0:8,0:8:24.08:0,24,880	0/0:30,0:30:87.07:0,87,2662	0/0:29,0:29:65.22:0,65,2501	0/0:22,0:22:66.23:0,66,2272	0/0:28,0:28:84.27:0,84,2884	0/0:18,0:18:54.19:0,54,1825	1/1:11,10:23:69.22:3501,69,0	0/0:16,0:16:45.15:0,45,1610	0/0:27,0:27:81.27:0,81,2821	0/0:13,0:13:36.11:0,36,1205	0/0:22,0:22:66.20:0,66,2201	0/0:23,0:23:66.21:0,66,2301	0/0:29,0:29:87.30:0,87,3116	0/0:25,0:25:75.26:0,75,2675	0/0:17,0:17:51.16:0,51,1758	0/0:25,0:25:75.24:0,75,2625	0/0:19,0:19:54.15:0,54,1915	1/1:4,6:13:33.58:1728,34,0	1/1:2,15:20:57.18:3064,57,0	1/1:5,5:11:30.09:1355,30,0	0/0:23,0:23:69.22:0,69,2383	0/0:24,0:24:69.19:0,69,2305	0/0:23,0:23:69.24:0,69,2518	0/0:25,0:25:75.26:0,75,2679	0/0:26,0:26:78.25:0,78,2730	1/1:14,14:29:87.30:4407,87,0	0/0:6,0:6:18.06:0,18,657
chr10	32222915	.	TCTCTAGCTCTCC	T	3971.96	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=10.194;DP=641;FS=26.191;HRun=0;HaplotypeScore=222.4139;InbreedingCoeff=0.9803;MQ=86.79;MQ0=0;MQRankSum=-8.723;QD=67.32;ReadPosRankSum=-0.275;VQSLOD=1.5033;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:48.16:0,48,2876	0/0:12,0:12:36.11:0,36,2027	0/0:33,0:33:87.30:0,87,4542	0/0:25,0:24:54.62:0,55,2604	0/0:31,0:31:87.24:0,87,4590	0/0:35,0:35:84.29:0,84,4892	0/0:22,0:22:54.17:0,54,3005	1/1:6,11:17:33.09:994,33,0	0/0:29,0:29:84.29:0,84,5038	0/0:31,0:31:93.32:0,93,5261	0/0:19,0:19:51.18:0,51,3041	0/0:26,0:26:75.24:0,75,4219	0/0:25,0:25:72.25:0,72,4249	0/0:26,0:26:72.25:0,72,4214	0/0:41,0:41:99:0,108,6586	0/0:39,0:39:99:0,108,6226	0/0:21,0:20:54.19:0,54,3181	0/0:17,0:17:48.16:0,48,2800	1/1:1,5:6:15.05:559,15,0	1/1:2,6:8:18.06:671,18,0	1/1:5,6:11:9.03:293,9,0	0/0:21,0:21:57.20:0,57,3370	0/0:26,0:26:69.24:0,69,4084	0/0:13,0:13:30.10:0,30,1837	0/0:27,0:27:69.23:0,69,3903	0/0:34,0:34:99:0,99,5858	1/1:4,13:17:39.13:1454,39,0	0/0:10,0:10:30.10:0,30,1617
chr10	32223012	.	T	TCACAGAAAAACA	57808.17	PASS	AC=48;AF=0.889;AN=54;BaseQRankSum=-4.261;DP=712;FS=7.446;HRun=0;HaplotypeScore=155.7829;InbreedingCoeff=0.8682;MQ=43.11;MQ0=30;MQRankSum=-9.820;QD=98.48;ReadPosRankSum=2.154;VQSLOD=4.7044;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:10,5:14:30.10:1312,30,0	1/1:4,6:13:15.05:732,15,0	0/0:38,0:10:30.10:0,30,653	0/0:40,0:14:42.11:0,42,876	1/1:15,11:30:66.23:2810,66,0	1/1:19,19:41:84.29:4046,84,0	1/1:6,5:12:18.06:764,18,0	1/1:15,0:6:9.03:209,9,0	1/1:12,20:28:63.22:3582,63,0	1/1:8,24:34:93.29:5280,93,0	1/1:10,11:24:54.19:2454,54,0	1/1:15,25:36:90.31:5005,90,0	1/1:8,16:27:51.18:2902,51,0	1/1:11,27:36:81.28:4181,81,0	0/0:45,0:45:99:0,126,4224	1/1:14,23:39:93.32:4951,93,0	1/1:2,4:5:9.03:550,9,0	1/1:4,1:4:12.04:557,12,0	1/1:10,0:4:3.01:184,3,0	1/1:9,11:17:39.13:1751,39,0	./.	1/1:13,17:31:75.26:3848,75,0	1/1:5,15:24:45.15:2157,45,0	1/1:6,3:8:21.07:611,21,0	1/1:14,13:28:69.24:3180,69,0	1/1:18,17:36:90.31:4554,90,0	1/1:11,13:24:36.12:1937,36,0	1/1:5,0:5:9.03:253,9,0
chr10	32223773	.	G	GAA	2658.45	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=10.221;DP=421;FS=2.020;HRun=0;HaplotypeScore=54.5822;InbreedingCoeff=0.9323;MQ=61.41;MQ0=1;MQRankSum=0.354;QD=31.65;ReadPosRankSum=0.906;VQSLOD=4.9330;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:72.23:0,72,1141	0/0:4,0:4:12.04:0,12,196	0/0:14,0:9:27.09:0,27,424	0/0:8,0:4:6.02:0,6,97	0/0:22,0:22:63.17:0,63,985	0/0:15,0:14:45.15:0,45,715	0/0:16,0:16:45.14:0,45,707	1/1:3,12:16:33.45:483,33,0	0/0:12,0:12:36.12:0,36,586	0/0:16,0:16:48.16:0,48,782	0/0:21,0:21:63.11:0,63,902	0/0:13,0:13:33.11:0,33,535	0/0:9,0:9:27.09:0,27,429	0/0:16,0:16:42.14:0,42,682	0/0:14,0:14:42.14:0,42,682	0/0:16,0:16:48.16:0,48,781	0/0:8,0:8:24.08:0,24,377	0/0:14,0:14:42.14:0,42,683	1/1:1,19:21:46.54:756,47,0	1/1:1,13:14:38.63:615,39,0	1/1:2,9:11:3.99:317,4,0	0/0:21,0:21:57.19:0,57,928	0/0:19,0:19:54.18:0,54,859	0/0:15,0:15:45.15:0,45,709	0/0:14,0:14:36.12:0,36,587	0/0:15,0:15:45.15:0,45,731	1/1:3,17:21:39.24:654,39,0	0/0:10,0:10:30.10:0,30,485
chr10	32225475	.	G	GGA	18783.33	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-17.127;DP=709;FS=6.788;HRun=0;HaplotypeScore=78.7869;InbreedingCoeff=0.9991;MQ=85.66;MQ0=0;MQRankSum=-4.690;QD=39.05;ReadPosRankSum=4.741;VQSLOD=7.0748;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,19:25:48.16:803,48,0	1/1:1,8:9:21.07:351,21,0	0/0:26,0:26:59.65:0,60,761	0/0:20,0:20:48.15:0,48,600	1/1:8,22:31:69.24:1148,69,0	1/1:3,22:25:63.22:1054,63,0	1/1:3,24:27:69.24:1155,69,0	0/0:40,0:40:99:0,99,1248	1/1:2,14:16:36.12:602,36,0	1/1:2,26:28:78.27:1296,78,0	1/1:1,15:17:42.14:703,42,0	1/1:5,16:22:45.15:753,45,0	1/1:3,25:28:63.18:1053,63,0	1/1:3,22:25:57.19:954,57,0	0/0:30,0:30:63.20:0,63,802	1/1:7,23:30:28.03:1012,28,0	1/1:3,22:25:57.19:954,57,0	1/1:3,20:23:54.18:904,54,0	0/0:17,0:17:36.11:0,36,455	0/0:33,0:33:87.25:0,87,1080	0/0:21,0:21:57.17:0,57,711	1/1:0,24:24:60.21:1004,60,0	1/1:4,19:23:48.08:803,48,0	1/1:4,26:30:75.26:1255,75,0	1/1:5,22:27:66.23:1102,66,0	1/1:3,27:30:78.25:1274,78,0	0/0:41,0:41:99:0,105,1307	1/1:2,12:16:36.12:602,36,0
chr10	32225712	.	G	GA	15974.68	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-13.619;DP=598;FS=0.000;HRun=3;HaplotypeScore=52.6517;InbreedingCoeff=0.9971;MQ=83.85;MQ0=0;MQRankSum=-5.602;QD=37.59;ReadPosRankSum=5.134;VQSLOD=4.7700;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,39:42:99:1639,117,0	1/1:1,13:14:36.04:504,36,0	0/0:18,0:18:54.12:0,54,621	0/0:17,0:17:39.11:0,39,465	1/1:2,29:31:75.25:1050,75,0	1/1:1,21:22:63.21:882,63,0	1/1:0,31:31:78.26:1093,78,0	0/0:34,0:34:96.25:0,96,1112	1/1:2,30:32:90.30:1260,90,0	1/1:1,20:21:63.21:876,63,0	1/1:0,14:14:39.13:546,39,0	1/1:2,22:24:63.21:882,63,0	1/1:1,19:20:57.19:798,57,0	1/1:2,13:15:33.11:462,33,0	0/0:30,0:30:78.24:0,78,936	1/1:0,17:17:51.17:714,51,0	1/1:1,35:36:99:1386,99,0	1/1:3,13:16:36.12:500,36,0	0/0:22,0:22:63.19:0,63,756	0/0:15,0:15:45.14:0,45,540	0/0:22,0:22:60.17:0,60,709	1/1:1,17:18:45.15:630,45,0	1/1:2,20:22:57.19:798,57,0	1/1:0,16:16:45.15:630,45,0	1/1:1,10:11:30.10:420,30,0	1/1:1,16:17:51.15:693,51,0	0/0:15,0:15:45.14:0,45,540	1/1:0,6:6:15.05:210,15,0
chr10	32225901	.	GA	G	16305.02	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=6.450;DP=624;FS=12.937;HRun=5;HaplotypeScore=78.5719;InbreedingCoeff=0.9780;MQ=90.99;MQ0=0;MQRankSum=-7.548;QD=29.81;ReadPosRankSum=6.618;VQSLOD=3.8689;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,53:56:99:1700,150,0	1/1:0,7:7:21.06:238,21,0	0/0:31,0:31:70.63:0,71,978	0/0:20,0:20:54.10:0,54,664	1/1:0,19:19:54.15:612,54,0	1/1:0,24:24:60.17:680,60,0	1/1:1,29:30:72.21:816,72,0	1/1:2,26:28:78.20:865,78,0	1/1:1,23:24:60.17:680,60,0	1/1:0,17:17:51.13:568,51,0	1/1:0,15:15:42.08:462,42,0	1/1:1,31:32:87.25:986,87,0	1/1:2,15:17:45.13:509,45,0	1/1:2,24:26:69.20:781,69,0	0/0:26,0:26:75.23:0,75,995	1/1:0,13:13:36.10:408,36,0	1/1:1,29:30:75.21:850,75,0	1/1:2,27:29:75.21:850,75,0	1/1:4,20:24:60.10:641,60,0	1/1:0,19:19:57.16:646,57,0	1/1:2,17:19:51.15:578,51,0	1/1:2,16:18:42.12:476,42,0	1/1:0,11:11:33.09:374,33,0	1/1:2,28:30:69.20:782,69,0	1/1:0,13:13:36.10:408,36,0	1/1:2,19:21:57.16:644,57,0	1/1:1,21:22:57.16:646,57,0	1/1:0,3:3:9.03:102,9,0
chr10	32227218	.	GCATCT	G	15853.47	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=11.627;DP=633;FS=41.930;HRun=0;HaplotypeScore=217.2954;InbreedingCoeff=0.9647;MQ=85.43;MQ0=0;MQRankSum=-17.537;QD=39.83;ReadPosRankSum=3.129;VQSLOD=3.1875;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,29:35:51.09:1041,51,0	1/1:1,7:8:15.01:287,15,0	0/0:33,0:33:99:0,99,2965	0/0:23,0:23:66.14:0,66,1927	1/1:2,10:12:21.07:457,21,0	1/1:5,18:23:48.12:925,48,0	1/1:0,13:13:39.13:847,39,0	0/0:27,0:27:81.27:0,81,2488	1/1:6,29:35:75.20:1564,75,0	1/1:6,13:19:29.77:584,30,0	1/1:2,10:12:18.06:371,18,0	1/1:8,23:31:54.18:1169,54,0	1/1:6,20:26:54.18:1174,54,0	1/1:5,22:27:57.20:1268,57,0	0/0:33,0:33:99:0,99,2943	1/1:6,33:39:90.31:2005,90,0	1/1:3,16:19:42.14:936,42,0	1/1:2,8:10:21.07:468,21,0	0/0:15,0:15:45.15:0,45,1453	0/0:33,0:33:68.96:0,69,2133	0/0:43,0:43:99:0,126,3836	1/1:6,3:9:8.99:154,9,0	1/1:2,6:8:15.05:323,15,0	1/1:0,23:23:38.68:824,39,0	1/1:5,13:18:24.04:488,24,0	1/1:11,16:27:42.12:836,42,0	0/0:28,0:28:84.29:0,84,2709	1/1:0,4:4:6.02:134,6,0
chr10	32227562	.	C	CG	13844.01	PASS	AC=48;AF=0.889;AN=54;BaseQRankSum=13.235;DP=494;FS=6.470;HRun=0;HaplotypeScore=200.5738;InbreedingCoeff=0.9794;MQ=85.86;MQ0=0;MQRankSum=-12.947;QD=33.68;ReadPosRankSum=4.858;VQSLOD=3.7697;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,10:12:32.12:393,32,0	1/1:0,14:14:36.11:446,36,0	0/0:30,0:30:76.17:0,76,1103	0/0:20,0:20:60.16:0,60,778	1/1:0,19:19:54.17:688,54,0	1/1:0,24:24:72.24:989,72,0	1/1:3,14:17:45.11:547,45,0	1/1:5,27:32:67.53:987,68,0	1/1:1,18:19:53.67:684,54,0	1/1:0,20:20:60.19:754,60,0	1/1:1,17:18:42.13:548,42,0	1/1:2,11:13:34.35:472,34,0	1/1:0,20:19:57.05:754,57,0	1/1:1,16:17:40.57:595,41,0	0/0:33,0:33:99:0,99,1366	1/1:1,17:17:48.16:638,48,0	1/1:2,11:13:33.06:409,33,0	1/1:1,5:6:13.35:193,13,0	1/1:1,13:14:39.13:517,39,0	1/1:2,23:25:63.19:812,63,0	1/1:2,10:12:23.86:277,24,0	1/1:0,17:17:48.15:608,48,0	1/1:0,21:21:57.18:717,57,0	1/1:1,8:9:11.89:120,12,0	1/1:2,18:20:45.14:561,45,0	1/1:1,18:19:49.24:689,49,0	1/1:2,10:12:36.08:446,36,0	./.
chr10	32227574	.	TC	T	11852.23	PASS	AC=48;AF=0.889;AN=54;BaseQRankSum=12.266;DP=554;FS=0.997;HRun=6;HaplotypeScore=212.1493;InbreedingCoeff=0.9766;MQ=77.53;MQ0=0;MQRankSum=-12.023;QD=24.80;ReadPosRankSum=1.765;VQSLOD=2.1064;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,12:14:30.02:308,30,0	1/1:1,16:17:42.11:450,42,0	0/0:23,0:23:63.17:0,63,798	0/0:19,0:19:41.33:0,41,577	1/1:0,24:24:66.08:681,66,0	1/1:3,28:31:78.15:823,78,0	1/1:1,20:21:54.08:566,54,0	1/1:10,22:32:66.08:674,66,0	1/1:2,17:19:51.12:545,51,0	1/1:1,26:27:75.17:795,75,0	1/1:0,18:18:42.02:424,42,0	1/1:3,15:18:39.10:418,39,0	1/1:1,26:26:66.03:668,66,0	1/1:3,15:18:39.06:405,39,0	0/0:34,0:34:99:0,99,1256	1/1:1,20:20:45.11:481,45,0	1/1:3,12:15:27.02:277,27,0	1/1:0,5:4:9.02:97,9,0	1/1:3,13:16:36.08:379,36,0	1/1:2,26:28:71.91:704,72,0	1/1:1,14:15:23.90:217,24,0	1/1:1,18:19:54.10:566,54,0	1/1:0,24:24:66.06:680,66,0	1/1:2,9:11:20.91:186,21,0	1/1:2,20:22:51.03:520,51,0	1/1:1,19:20:57.09:598,57,0	1/1:2,14:16:38.98:393,39,0	./.
chr10	32227764	.	ACTGT	A	10581.09	PASS	AC=46;AF=0.885;AN=52;BaseQRankSum=6.757;DP=484;FS=19.311;HRun=0;HaplotypeScore=194.0948;InbreedingCoeff=0.8449;MQ=69.08;MQ0=1;MQRankSum=-7.510;QD=26.52;ReadPosRankSum=1.011;VQSLOD=3.3704;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,7:12:12:177,12,0	1/1:3,10:13:27.09:495,27,0	0/0:26,0:24:56.76:0,57,1259	0/0:17,0:17:39.10:0,39,854	1/1:4,27:31:15.04:269,15,0	1/1:4,17:21:36.12:660,36,0	1/1:4,12:16:6.02:110,6,0	1/1:4,23:27:66.17:1098,66,0	1/1:0,13:13:30.07:550,30,0	1/1:3,25:28:60.19:1057,60,0	1/1:2,17:19:8.97:129,9,0	1/1:4,11:15:39.12:675,39,0	1/1:2,16:18:27.09:478,27,0	1/1:1,20:21:33.07:570,33,0	0/0:30,0:30:60.19:0,60,1488	1/1:2,15:17:39.05:645,39,0	1/1:3,11:14:15.01:272,15,0	1/1:7,3:10:11.99:178,12,0	1/1:4,7:11:24.05:407,24,0	1/1:3,18:21:5.95:73,6,0	./.	1/1:6,9:15:21.02:315,21,0	1/1:3,6:9:17.86:265,18,0	1/1:1,9:10:5.97:46,6,0	1/1:3,17:20:30.10:550,30,0	1/1:4,13:17:51.14:842,51,0	1/1:3,18:21:42.10:720,42,0	./.
chr10	32227787	.	ACTAT	A	1460.19	PASS	AC=20;AF=0.400;AN=50;BaseQRankSum=-2.563;DP=514;FS=3.181;HRun=0;HaplotypeScore=232.7932;InbreedingCoeff=0.8100;MQ=46.66;MQ0=3;MQRankSum=-1.714;QD=7.23;ReadPosRankSum=-1.452;VQSLOD=2.4678;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:8,7:16:0.05:127,0,0	0/0:10,0:10:15.04:0,15,279	./.	./.	1/1:15,6:21:5.85:92,6,0	0/0:17,0:18:26.38:0,26,526	0/0:13,0:13:9.03:0,9,210	1/1:31,0:29:5.93:40,6,0	0/0:15,0:15:18.05:0,18,314	0/0:31,0:32:48.16:0,48,1048	1/1:13,15:29:17.76:251,18,0	0/0:9,0:22:45.10:0,45,723	0/0:16,0:20:29.69:0,30,444	0/0:15,0:22:35.99:0,36,543	1/1:14,0:34:25.77:211,26,0	0/0:17,0:16:27.04:0,27,531	0/0:13,0:14:12.02:0,12,175	1/1:4,7:10:18.06:278,18,0	1/1:10,2:12:6.02:93,6,0	1/1:11,7:18:9.03:139,9,0	1/1:9,3:12:6.02:92,6,0	0/0:6,0:18:18.96:0,19,245	0/0:7,0:14:2.85:0,3,28	0/0:8,0:12:5.58:0,6,104	0/0:21,0:21:30.10:0,30,662	0/0:15,0:27:48.31:0,48,667	1/1:10,7:18:21.07:323,21,0	./.
chr10	32228604	.	AGTCTGTCTGTCTGTCT	A	17870.49	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=1.462;DP=544;FS=3.241;HRun=0;HaplotypeScore=262.5477;InbreedingCoeff=0.9696;MQ=58.88;MQ0=3;MQRankSum=-7.979;QD=51.95;ReadPosRankSum=3.554;VQSLOD=4.1026;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,8:20:33.11:843,33,0	1/1:3,4:7:18.06:679,18,0	0/0:25,0:20:30.10:0,30,1034	0/0:26,0:19:41.17:0,41,1603	1/1:13,7:20:30.10:602,30,0	1/1:14,11:25:45.15:1426,45,0	1/1:17,6:23:27.09:680,27,0	0/0:26,0:27:36.12:0,36,688	1/1:7,10:17:39.10:1387,39,0	1/1:14,5:19:39.13:1208,39,0	1/1:7,9:16:27.09:545,27,0	1/1:8,9:17:33.09:899,33,0	1/1:13,10:23:39.13:1302,39,0	1/1:16,12:28:57.20:1591,57,0	0/0:33,0:33:75.24:0,75,4560	1/1:3,7:10:27.09:871,27,0	1/1:10,4:14:21.06:527,21,0	1/1:4,1:5:6.02:195,6,0	0/0:13,0:20:30.10:0,30,528	0/0:13,0:19:36.12:0,36,682	0/0:18,0:22:32.94:0,33,645	1/1:16,10:26:51.17:1239,51,0	1/1:12,13:25:54.17:1061,54,0	1/1:10,2:12:27.09:526,27,0	1/1:6,6:12:24.08:717,24,0	1/1:11,7:18:30.10:1172,30,0	0/0:10,0:27:60.21:0,60,1055	1/1:4,3:7:9.03:400,9,0
chr10	32228625	.	G	GGTTT	10329.77	PASS	AB=0.978;AC=25;AF=0.446;AN=56;BaseQRankSum=2.428;DP=568;FS=7.273;HRun=0;HaplotypeScore=254.6693;InbreedingCoeff=-0.1595;MQ=47.58;MQ0=6;MQRankSum=-8.945;QD=31.30;ReadPosRankSum=3.472;VQSLOD=3.5206;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:18,1:19:31.46:658,0,31	0/1:9,0:10:42.70:308,0,43	0/0:30,0:22:40.46:0,40,870	0/0:37,0:26:67.55:0,68,1155	1/1:13,1:14:1.59:547,2,0	0/1:23,0:23:95.26:772,0,95	0/1:15,2:18:99:494,0,142	0/0:33,0:31:90.29:0,90,1631	0/1:20,0:20:99:437,0,130	0/1:21,0:21:99:473,0,312	0/1:17,0:17:29.08:512,0,29	1/1:16,1:17:1.54:511,2,0	0/1:19,0:19:99:504,0,158	0/1:26,1:27:66.10:966,0,66	0/0:32,0:32:96.29:0,96,1892	0/1:13,1:14:76.56:437,0,77	0/1:10,1:11:98.71:257,0,99	0/1:3,0:3:44.76:53,0,45	0/0:21,0:21:63.20:0,63,1030	0/0:24,0:24:57.10:0,57,1000	0/0:32,0:32:60.88:0,61,1161	1/1:22,1:23:9.82:1005,10,0	1/1:26,0:26:69.21:1158,69,0	1/1:12,0:12:29.70:491,30,0	0/1:18,0:18:90.50:418,0,90	0/1:14,0:14:99:292,0,162	0/0:29,0:29:73.45:0,73,1061	0/1:4,0:4:37.57:38,0,79
chr10	32228631	.	CTG	C	525.44	PASS	AB=0.979;AC=26;AF=0.464;AN=56;BaseQRankSum=12.261;DP=581;FS=7.369;HRun=0;HaplotypeScore=268.4273;InbreedingCoeff=0.0341;MQ=48.51;MQ0=6;MQRankSum=-8.729;QD=1.42;ReadPosRankSum=10.381;VQSLOD=0.1159;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:18,1:19:6.56:30,7,0	1/1:9,0:9:4.73:37,5,0	0/0:32,0:24:49.47:0,49,842	0/0:41,0:30:74.71:0,75,1068	0/0:13,1:14:0.90:0,1,4	0/1:26,0:26:53.29:53,0,92	0/1:15,2:17:9.19:9,0,75	0/0:32,0:30:53.83:0,54,900	0/1:21,0:21:45.70:73,0,46	0/1:20,0:20:24.15:24,0,382	0/1:17,0:17:0:0,0,0	0/1:17,1:18:37.53:38,0,51	0/1:19,0:19:43.62:44,0,84	1/1:28,1:29:13.23:70,13,0	0/0:34,0:34:99:0,102,1778	0/1:17,1:18:2.31:46,0,2	0/1:10,1:11:1.03:1,0,142	0/0:4,0:4:1.40:0,1,91	0/1:21,0:21:2.17:2,0,456	0/0:22,0:22:48.76:0,49,489	0/0:31,0:31:58.21:0,58,638	1/1:22,1:23:11.09:73,11,0	0/1:27,0:27:5.13:5,0,5	1/1:12,0:12:2.33:10,2,0	1/1:20,0:20:10.80:67,11,0	0/1:13,0:13:50.57:51,0,161	0/1:27,0:27:33.30:33,0,225	0/1:4,0:4:21.79:22,0,32
chr10	32228675	.	GTC	G	14991.34	PASS	AB=0.667;AC=49;AF=0.875;AN=56;BaseQRankSum=10.320;DP=708;FS=0.865;HRun=0;HaplotypeScore=294.9773;InbreedingCoeff=0.7973;MQ=54.67;MQ0=3;MQRankSum=-11.512;QD=25.50;ReadPosRankSum=7.221;VQSLOD=4.9018;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,17:23:23.96:342,24,0	1/1:1,12:13:18.06:256,18,0	0/0:43,0:37:94.22:0,94,1514	0/0:39,0:34:82.99:0,83,1121	1/1:0,19:19:15.05:214,15,0	1/1:6,33:39:57.19:811,57,0	1/1:1,17:18:33.11:470,33,0	1/1:3,33:36:99:1278,99,0	1/1:1,27:28:54.11:735,54,0	1/1:2,31:33:96.17:1302,96,0	1/1:5,19:24:18:256,18,0	1/1:2,17:19:27.09:384,27,0	1/1:5,23:28:47.77:666,48,0	1/1:3,26:29:60.20:852,60,0	0/0:37,0:37:99:0,105,1784	1/1:0,21:21:45.15:640,45,0	1/1:0,10:10:24.08:342,24,0	0/1:2,2:4:9.89:77,0,10	1/1:4,23:27:66.15:909,66,0	1/1:3,28:31:72.24:1023,72,0	1/1:2,40:42:90.28:1288,90,0	1/1:2,21:23:18.02:256,18,0	1/1:4,20:24:15:214,15,0	1/1:6,8:14:6.02:86,6,0	1/1:1,25:26:54.18:768,54,0	1/1:2,19:21:63.03:829,63,0	1/1:7,24:31:58.37:854,58,0	1/1:2,3:5:12:141,12,0
chr10	32228699	.	GCCTC	G	14335.74	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=7.316;DP=693;FS=2.882;HRun=0;HaplotypeScore=272.5776;InbreedingCoeff=0.9238;MQ=57.80;MQ0=2;MQRankSum=-15.122;QD=32.80;ReadPosRankSum=3.764;VQSLOD=4.8491;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,29:29:27.09:537,27,0	1/1:0,11:11:18.06:358,18,0	0/0:28,0:25:59.34:0,59,1591	0/0:33,0:29:64.29:0,64,1742	1/1:2,27:29:18.06:358,18,0	1/1:3,31:34:57.20:1135,57,0	1/1:1,18:19:27.09:537,27,0	0/0:34,0:34:96.18:0,96,1586	1/1:1,26:27:51.18:1016,51,0	1/1:4,28:32:87.30:1721,87,0	1/1:2,21:23:21.07:418,21,0	1/1:2,17:19:36.12:717,36,0	1/1:6,21:27:54.18:1033,54,0	1/1:0,30:30:60.21:1187,60,0	0/0:41,0:41:99:0,123,3350	1/1:2,19:21:45.15:896,45,0	1/1:0,15:15:27.08:538,27,0	1/1:1,1:2:3.01:60,3,0	0/0:19,0:19:50.98:0,51,767	0/0:35,0:35:90.13:0,90,1635	0/0:41,0:41:96.27:0,96,1768	1/1:2,22:24:30.09:598,30,0	1/1:1,20:21:23.95:479,24,0	1/1:0,14:14:6.49:120,6,0	1/1:3,30:33:63.22:1255,63,0	1/1:2,24:26:72.17:1314,72,0	0/0:24,0:24:57.14:0,57,1077	1/1:0,1:1:3.01:60,3,0
chr10	32229396	.	A	ACCAATACCACT	66532.70	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-3.478;DP=612;FS=8.000;HRun=0;HaplotypeScore=185.4360;InbreedingCoeff=0.9180;MQ=70.10;MQ0=0;MQRankSum=-12.193;QD=121.41;ReadPosRankSum=1.029;VQSLOD=4.9881;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,9:22:50.32:2397,50,0	1/1:0,6:10:21.07:1082,21,0	0/0:18,0:18:51.17:0,51,1840	0/0:16,0:16:42.62:0,43,1380	1/1:19,18:44:90.95:3949,91,0	1/1:5,17:25:63.22:3329,63,0	1/1:8,5:16:35.80:1506,36,0	1/1:23,11:38:99:4710,102,0	1/1:7,14:25:63.22:3539,63,0	1/1:14,21:36:99:5539,102,0	1/1:11,15:28:69.06:3146,69,0	1/1:4,11:18:48.10:2591,48,0	1/1:9,15:27:75.19:3760,75,0	1/1:9,8:18:48.10:2417,48,0	0/0:30,0:30:90.30:0,90,2975	1/1:3,16:24:57.20:3138,57,0	1/1:6,7:13:30.99:1623,31,0	1/1:5,4:9:24.08:1125,24,0	1/1:12,8:23:54.15:2461,54,0	1/1:9,15:26:75.07:3459,75,0	1/1:7,3:13:15:716,15,0	1/1:7,9:21:50.94:2302,51,0	1/1:14,9:26:59.79:2466,60,0	1/1:4,3:9:9.92:450,10,0	1/1:6,16:24:63.22:3454,63,0	1/1:10,8:19:57.20:2832,57,0	1/1:10,16:31:81.28:4366,81,0	1/1:0,2:3:3.01:174,3,0
chr10	32229495	.	AAGTT	A	12465.10	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=5.746;DP=358;FS=90.851;HRun=0;HaplotypeScore=66.6369;InbreedingCoeff=0.9297;MQ=93.62;MQ0=3;MQRankSum=-7.936;QD=41.83;ReadPosRankSum=3.142;VQSLOD=1.5654;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,7:9:12.04:221,12,0	1/1:0,5:5:15.05:276,15,0	0/0:19,0:19:40.38:0,40,986	0/0:17,0:17:42.11:0,42,893	1/1:6,12:18:39.01:682,39,0	1/1:2,12:13:36.12:660,36,0	1/1:0,7:7:18.06:325,18,0	1/1:4,13:17:36.12:662,36,0	1/1:2,10:12:33.11:607,33,0	1/1:4,15:19:36.11:625,36,0	1/1:2,9:11:30.09:518,30,0	1/1:2,7:9:21.07:383,21,0	1/1:2,15:17:39.13:717,39,0	1/1:1,6:7:18.06:327,18,0	0/0:24,0:24:72.25:0,72,1865	1/1:3,12:15:36.12:662,36,0	1/1:2,18:19:39.13:717,39,0	1/1:1,9:10:24.08:438,24,0	1/1:2,7:9:24.08:441,24,0	1/1:5,17:22:60.21:1091,60,0	1/1:0,3:3:9.03:166,9,0	1/1:1,9:10:18.02:276,18,0	1/1:4,9:13:27.09:487,27,0	1/1:0,5:4:9.03:166,9,0	1/1:3,10:12:24.08:438,24,0	1/1:1,11:12:30.08:512,30,0	1/1:3,12:15:42.13:736,42,0	1/1:0,6:6:18.06:331,18,0
chr10	32229574	.	G	GT	3534.02	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-10.633;DP=553;FS=10.192;HRun=8;HaplotypeScore=58.4533;InbreedingCoeff=0.9735;MQ=63.11;MQ0=0;MQRankSum=1.880;QD=26.98;ReadPosRankSum=-2.955;VQSLOD=2.7707;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:51.03:0,51,467	0/0:11,0:11:30.02:0,30,274	0/0:12,0:12:17.28:0,17,194	0/0:4,0:3:9:0,9,82	0/0:43,0:43:99:0,114,1039	0/0:22,0:22:54.01:0,54,488	0/0:11,0:11:21.01:0,21,192	1/1:14,31:45:93.24:1053,93,0	0/0:16,0:16:45.02:0,45,412	0/0:29,0:29:84.04:0,84,769	0/0:28,0:29:77.07:0,77,692	0/0:13,0:13:33.01:0,33,302	0/0:26,0:26:69.03:0,69,631	0/0:17,0:17:42.02:0,42,384	0/0:21,0:21:63.03:0,63,577	0/0:15,0:15:45.02:0,45,412	0/0:17,0:17:42.02:0,42,384	0/0:8,0:8:24.01:0,24,220	1/1:5,14:19:42.04:467,42,0	1/1:3,29:32:84.18:941,84,0	1/1:0,4:4:12.04:138,12,0	0/0:11,0:11:30.01:0,30,275	0/0:28,0:28:72.03:0,72,659	0/0:7,0:7:21.01:0,21,192	0/0:30,0:30:87.05:0,87,796	0/0:25,0:25:63.02:0,63,577	1/1:3,28:31:81.24:935,81,0	0/0:7,0:7:21.01:0,21,192
chr10	32229994	.	T	TTGTG	632.95	PASS	AB=0.938;AC=20;AF=0.385;AN=52;BaseQRankSum=-1.507;DP=615;FS=2.070;HRun=0;HaplotypeScore=158.4099;InbreedingCoeff=0.3212;MQ=61.55;MQ0=9;MQRankSum=-1.556;QD=2.18;ReadPosRankSum=-0.152;VQSLOD=2.4863;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:45,0:45:4.93:5,0,87	0/0:9,0:9:3:0,3,26	./.	./.	0/0:27,0:27:12:0,12,104	0/0:20,0:20:5.98:0,6,52	0/0:30,0:30:8.99:0,9,76	1/1:32,0:31:0.47:1,0,0	0/1:17,0:17:2.73:3,0,118	0/1:22,0:22:10.99:11,0,23	0/0:16,0:16:2.97:0,3,20	1/1:23,0:23:2.51:8,3,0	0/1:18,0:17:5.23:17,0,5	0/0:21,0:21:0.43:0,0,1	0/1:8,9:20:30.88:205,0,31	0/0:29,0:29:15.82:0,16,133	0/0:19,0:19:4.77:0,5,96	0/0:19,0:18:15.40:0,15,133	1/1:22,0:20:15.01:215,15,0	1/1:25,0:25:6.02:95,6,0	0/1:17,0:15:0:0,0,0	0/0:23,0:22:3:0,3,33	0/0:23,0:23:6.01:0,6,60	0/0:32,0:32:14.93:0,15,127	0/0:24,0:23:14.96:0,15,132	1/1:21,0:21:2.88:15,3,0	1/1:21,0:21:15.48:199,15,0	1/1:7,0:7:0.89:2,1,0
chr10	32230005	.	T	TGA	6866.53	PASS	AB=0.931;AC=44;AF=0.786;AN=56;BaseQRankSum=-3.237;DP=597;FS=27.674;HRun=0;HaplotypeScore=101.3743;InbreedingCoeff=0.2302;MQ=56.80;MQ0=13;MQRankSum=2.606;QD=12.53;ReadPosRankSum=5.605;VQSLOD=2.9577;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:45,0:45:60.58:495,61,0	1/1:10,0:10:22.69:151,23,0	0/0:13,0:4:6:0,6,58	0/0:14,0:6:11.86:0,12,140	1/1:21,0:21:29.76:207,30,0	1/1:19,0:19:43.77:312,44,0	1/1:29,0:29:49.97:399,50,0	0/1:33,0:29:0.37:496,0,0	0/1:17,0:17:7.05:183,0,7	1/1:22,0:22:13.69:399,14,0	0/1:16,0:16:37.35:144,0,37	1/1:18,0:18:30.43:266,30,0	1/1:19,0:18:0.94:230,1,0	1/1:19,0:19:22.02:312,22,0	0/0:22,0:22:2.87:0,3,171	1/1:26,0:26:37.71:406,38,0	1/1:18,0:18:22.14:220,22,0	1/1:23,0:22:0.16:193,0,0	0/1:6,14:18:19.76:294,0,20	1/1:24,0:24:13.16:274,13,0	0/1:19,0:17:25.64:81,0,26	1/1:25,0:23:13.08:186,13,0	1/1:22,0:22:12:232,12,0	1/1:35,0:35:49.74:353,50,0	1/1:28,0:27:46.49:328,46,0	0/1:19,0:19:5.93:348,0,6	1/1:14,1:15:3.02:267,3,0	1/1:6,0:6:11.02:92,11,0
chr10	32230044	.	GTGTC	G	2741.22	PASS	AB=0.953;AC=39;AF=0.722;AN=54;BaseQRankSum=4.767;DP=531;FS=3.291;HRun=0;HaplotypeScore=110.3642;InbreedingCoeff=0.1365;MQ=69.47;MQ0=9;MQRankSum=-0.901;QD=6.33;ReadPosRankSum=3.685;VQSLOD=2.0511;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:41,0:41:20.08:29,0,20	1/1:7,0:7:2.58:13,3,0	0/0:38,0:25:62.31:0,62,589	0/0:31,0:16:37.62:0,38,374	0/1:16,0:16:18.21:21,0,18	1/1:3,12:15:11.44:106,11,0	1/1:34,0:34:5.17:21,5,0	1/1:20,0:19:31.77:277,32,0	1/1:13,2:15:33.53:342,34,0	1/1:16,0:16:23.24:270,23,0	1/1:9,2:11:16.10:147,16,0	1/1:16,0:16:1.48:5,1,0	1/1:14,0:14:8.38:143,8,0	0/1:12,0:12:13.26:18,0,13	0/0:28,0:28:50.65:0,51,655	1/1:19,0:19:35.49:231,35,0	0/1:16,1:17:1.88:76,0,2	1/1:17,1:18:13.24:103,13,0	0/1:13,0:13:99:126,0,116	0/1:15,0:15:16.21:144,0,16	1/1:11,0:9:11.96:94,12,0	0/1:7,10:16:24.71:30,0,25	0/1:14,0:14:28.20:154,0,28	1/1:36,1:37:13.76:62,14,0	1/1:22,1:22:14.09:109,14,0	1/1:15,0:15:22.18:177,22,0	0/1:17,0:17:59.43:211,0,59	./.
chr10	32230046	.	GTC	G	4692.37	PASS	AB=0.938;AC=47;AF=0.870;AN=54;BaseQRankSum=3.502;DP=509;FS=1.907;HRun=0;HaplotypeScore=94.7074;InbreedingCoeff=0.6409;MQ=71.28;MQ0=8;MQRankSum=-4.119;QD=11.28;ReadPosRankSum=2.023;VQSLOD=4.3527;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,38:40:2.90:171,3,0	1/1:0,7:7:3.01:46,3,0	0/0:39,0:26:64:0,64,612	0/0:31,0:16:37.62:0,38,374	1/1:2,14:16:9.50:138,10,0	1/1:13,1:14:7.26:75,7,0	1/1:1,31:32:6.02:92,6,0	1/1:7,8:14:35.74:286,36,0	1/1:13,2:15:35.63:378,36,0	1/1:1,15:16:41.91:408,42,0	1/1:13,0:13:29.80:240,30,0	1/1:2,12:14:2.99:44,3,0	1/1:14,0:14:29.86:268,30,0	1/1:4,8:12:5.75:60,6,0	0/0:23,0:23:50.98:0,51,505	1/1:13,5:18:42.01:467,42,0	1/1:3,14:17:12.02:163,12,0	1/1:2,16:18:15.92:211,16,0	1/1:14,0:14:15.88:180,16,0	1/1:16,0:16:12.01:177,12,0	1/1:11,0:10:11.96:94,12,0	0/1:14,1:14:2.35:11,0,2	1/1:11,1:12:12.22:202,12,0	1/1:5,31:36:15.05:229,15,0	1/1:3,17:20:15.04:210,15,0	1/1:13,0:13:26.93:225,27,0	1/1:18,0:18:40.18:320,40,0	./.
chr10	32230762	.	C	CT	20771.36	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=8.372;DP=722;FS=2.954;HRun=6;HaplotypeScore=157.8091;InbreedingCoeff=0.9935;MQ=80.18;MQ0=0;MQRankSum=-9.012;QD=31.96;ReadPosRankSum=3.791;VQSLOD=2.6580;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,48:51:99:1585,126,0	1/1:1,10:11:24.08:302,24,0	0/0:31,0:30:74.89:0,75,739	0/0:15,0:15:37.51:0,38,346	1/1:2,25:27:78.25:978,78,0	1/1:1,24:25:69.22:868,69,0	1/1:1,20:21:51.16:642,51,0	1/1:5,24:29:72.22:893,72,0	1/1:2,26:28:60.19:755,60,0	1/1:0,28:28:84.27:1057,84,0	1/1:2,11:13:33.11:415,33,0	1/1:1,25:26:75.24:941,75,0	1/1:7,28:35:78.25:981,78,0	1/1:4,23:27:66.21:830,66,0	0/0:26,0:26:75.17:0,75,765	1/1:3,33:36:93.30:1170,93,0	1/1:4,32:35:90.29:1132,90,0	1/1:0,18:18:51.16:641,51,0	1/1:5,17:22:51.14:615,51,0	1/1:1,25:26:75.20:926,75,0	1/1:1,17:18:48.15:604,48,0	1/1:2,29:31:81.22:1001,81,0	1/1:4,25:29:69.05:867,69,0	1/1:1,35:36:90.29:1132,90,0	1/1:2,18:20:51.16:642,51,0	1/1:3,26:29:75.24:944,75,0	1/1:3,19:22:54.15:663,54,0	1/1:1,5:6:15.05:189,15,0
chr10	32235032	.	T	TAAA	1920.95	PASS	AB=1.000;AC=11;AF=0.204;AN=54;BaseQRankSum=0.453;DP=432;FS=11.335;HRun=11;HaplotypeScore=66.6795;InbreedingCoeff=0.8578;MQ=57.26;MQ0=5;MQRankSum=-5.290;QD=22.34;ReadPosRankSum=-4.744;VQSLOD=-0.0347;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:36:33.17:0,33,765	0/0:5,0:6:14.95:0,15,158	./.	0/1:8,0:5:7.80:8,0,57	0/0:17,0:22:49.49:0,49,542	0/0:18,0:19:51.03:0,51,578	0/0:14,0:13:31.62:0,32,383	1/1:10,7:18:29.93:372,30,0	0/0:14,0:14:36.07:0,36,399	0/0:22,0:22:51.02:0,51,574	0/0:22,0:21:36:0,36,420	0/0:8,0:8:21.03:0,21,234	0/0:24,0:24:50.95:0,51,596	0/0:4,0:4:9:0,9,105	0/0:15,0:15:36.07:0,36,420	0/0:10,0:10:30.07:0,30,338	0/0:22,0:21:57.09:0,57,654	0/0:16,0:16:39.01:0,39,441	1/1:7,6:16:35.99:456,36,0	1/1:5,9:16:27.07:453,27,0	1/1:2,0:3:7.24:71,7,0	0/0:8,0:8:11.97:0,12,131	0/0:14,0:14:30.02:0,30,340	0/0:15,0:15:36:0,36,403	0/0:20,0:21:57.07:0,57,648	0/0:21,0:20:48.05:0,48,536	1/1:6,12:21:45.09:732,45,0	0/0:8,0:8:24.07:0,24,281
chr10	32235615	.	ATGTGTGTG	A	8695.66	PASS	AB=0.759;AC=36;AF=0.643;AN=56;BaseQRankSum=7.381;DP=593;FS=11.062;HRun=0;HaplotypeScore=161.6344;InbreedingCoeff=0.6490;MQ=65.92;MQ0=9;MQRankSum=-9.512;QD=22.82;ReadPosRankSum=1.111;VQSLOD=4.0363;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:15,15:30:34.05:588,0,34	1/1:1,11:13:30.43:642,30,0	0/0:35,0:24:3.01:0,3,40	0/0:41,0:21:6.02:0,6,74	1/1:11,14:24:24.08:529,24,0	1/1:8,12:20:30.10:755,30,0	1/1:9,10:19:21.03:473,21,0	0/0:19,0:19:18.06:0,18,523	1/1:7,8:16:21.07:509,21,0	1/1:10,8:18:18.06:372,18,0	1/1:8,6:14:12.03:255,12,0	1/1:11,0:17:14.51:79,15,0	1/1:15,11:26:23.77:563,24,0	1/1:11,11:22:21.07:453,21,0	0/0:19,0:19:33.11:0,33,1191	1/1:11,12:25:42.14:980,42,0	1/1:8,7:16:17.09:337,17,0	0/1:11,0:11:66.48:66,0,143	0/0:16,0:20:23.29:0,23,558	0/0:19,0:19:51.18:0,51,1687	0/0:31,0:29:23.67:0,24,648	1/1:6,13:19:17.97:453,18,0	0/1:7,0:15:27.98:36,0,28	0/1:19,1:25:1.72:23,0,2	1/1:4,10:14:27.09:680,27,0	1/1:12,13:25:30.09:675,30,0	0/0:26,0:27:51.16:0,51,1738	1/1:6,3:8:9.03:227,9,0
chr10	32236630	.	TAAAC	T	2897.31	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=10.810;DP=680;FS=3.017;HRun=0;HaplotypeScore=108.3675;InbreedingCoeff=0.9864;MQ=66.73;MQ0=3;MQRankSum=-3.025;QD=27.33;ReadPosRankSum=-0.050;VQSLOD=3.6377;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:87.18:0,87,1909	0/0:7,0:7:15.05:0,15,370	0/0:23,0:17:22.79:0,23,400	0/0:21,0:18:26.45:0,26,479	0/0:37,0:37:93.30:0,93,2168	0/0:29,0:29:72.18:0,72,1569	0/0:23,0:23:48.16:0,48,1151	1/1:12,17:29:51.16:805,51,0	0/0:27,0:27:63.22:0,63,1540	0/0:27,0:27:57.20:0,57,1406	0/0:32,0:32:72.23:0,72,1667	0/0:20,0:20:48.16:0,48,1156	0/0:22,0:22:54.03:0,54,1083	0/0:35,0:35:66.20:0,66,1450	0/0:29,0:29:78.25:0,78,1839	0/0:25,0:25:57.16:0,57,1298	0/0:28,0:28:60.17:0,60,1377	0/0:17,0:17:39.13:0,39,948	1/1:8,7:15:18.05:271,18,0	1/1:4,11:15:36.12:598,36,0	1/1:4,16:20:39.13:649,39,0	0/0:24,0:24:57.09:0,57,1305	0/0:26,0:26:48.15:0,48,1075	0/0:36,0:36:99:0,99,2197	0/0:24,0:24:63.19:0,63,1378	0/0:24,0:24:63.22:0,63,1513	1/1:10,17:26:45.15:748,45,0	0/0:4,0:4:12.04:0,12,296
chr10	32236853	.	GCACA	G	939.52	PASS	AB=0.876;AC=6;AF=0.107;AN=56;BaseQRankSum=2.219;DP=571;FS=8.001;HRun=0;HaplotypeScore=110.5671;InbreedingCoeff=0.4025;MQ=58.82;MQ0=6;MQRankSum=2.640;QD=9.30;ReadPosRankSum=3.198;VQSLOD=2.2679;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:4.95:0,5,724	0/0:8,0:10:20.79:0,21,391	0/0:21,0:11:6.91:0,7,79	0/0:16,0:12:2.98:0,3,22	0/0:17,0:20:47.21:0,47,699	0/0:17,0:22:47.06:0,47,770	0/0:12,0:12:18.06:0,18,344	0/0:39,0:39:45.45:0,45,503	0/0:21,0:22:43.30:0,43,744	0/0:23,0:22:37.81:0,38,715	0/0:20,0:21:44.74:0,45,652	0/0:20,0:24:53.61:0,54,998	0/0:18,0:18:42.32:0,42,848	0/0:20,0:21:35.86:0,36,710	0/1:18,2:24:5.37:5,0,783	0/0:11,0:13:27.10:0,27,474	0/1:19,1:20:11.28:11,0,594	0/0:5,0:7:8.77:0,9,156	0/0:16,0:15:22.76:0,23,364	0/0:22,0:22:5.98:0,6,89	0/0:16,0:14:5.24:0,5,38	0/0:16,0:16:30.09:0,30,577	1/1:17,16:35:1.27:516,1,0	1/1:6,15:22:32.37:524,32,0	0/0:21,0:23:35.32:0,35,628	0/0:20,0:20:30.07:0,30,563	0/0:17,0:16:20.73:0,21,314	0/0:5,0:6:14.51:0,15,140
chr10	32237690	.	T	TATA	1446.29	PASS	AB=0.901;AC=15;AF=0.268;AN=56;BaseQRankSum=7.149;DP=545;FS=62.724;HRun=0;HaplotypeScore=167.2610;InbreedingCoeff=-0.3645;MQ=76.49;MQ0=0;MQRankSum=-7.885;QD=4.71;ReadPosRankSum=-0.470;VQSLOD=0.9351;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:31,1:32:59.92:60,0,1397	0/1:10,2:12:99:117,0,417	0/0:34,0:34:99:0,99,1729	0/0:28,0:26:78.20:0,78,1314	0/0:28,2:30:60.78:0,61,1140	0/1:18,1:19:37.64:38,0,820	0/0:18,0:18:42.14:0,42,762	0/1:10,6:16:99:404,0,352	0/1:15,2:17:96.24:96,0,746	0/1:16,1:17:25.05:25,0,788	0/0:12,1:13:29.95:0,30,538	0/1:20,2:22:90.12:90,0,855	0/1:20,1:21:17.28:17,0,883	0/1:25,2:27:81.12:81,0,1029	0/0:21,0:21:54.19:0,54,1005	0/0:13,0:13:39.13:0,39,726	0/1:7,1:8:49.60:50,0,354	0/0:11,0:11:24.48:0,24,499	0/1:15,1:16:28.65:29,0,738	0/1:28,7:35:14.66:15,0,1212	0/0:8,0:8:21.07:0,21,391	0/0:17,2:19:36.21:0,36,702	0/0:16,1:17:38.83:0,39,712	0/1:22,0:22:99:105,0,588	0/1:17,2:19:99:105,0,713	0/1:18,5:24:99:373,0,816	0/0:13,1:14:39.12:0,39,660	0/0:10,0:10:24.08:0,24,446
chr10	32237718	.	G	GGTGGAGGGCCAT	1414.43	PASS	AB=0.733;AC=34;AF=0.944;AN=36;BaseQRankSum=-2.358;DP=43;FS=7.715;HRun=0;HaplotypeScore=25.9756;InbreedingCoeff=-0.2305;MQ=71.25;MQ0=0;MQRankSum=-1.010;QD=33.68;ReadPosRankSum=0.144;VQSLOD=0.8481;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/1:3,0:4:19.02:103,0,19	0/1:3,1:6:10.25:519,0,10	1/1:5,0:5:3.01:49,3,0	1/1:1,0:1:3:25,3,0	1/1:2,0:2:2.97:20,3,0	1/1:1,0:1:3.01:67,3,0	1/1:2,0:2:5.96:44,6,0	./.	1/1:1,0:1:3.01:71,3,0	1/1:1,0:1:3.01:49,3,0	./.	1/1:4,0:4:3.01:71,3,0	1/1:3,0:3:6.02:90,6,0	./.	1/1:1,0:1:3.01:41,3,0	1/1:3,0:3:3.01:40,3,0	./.	1/1:1,0:1:3.01:71,3,0	1/1:2,0:2:2.98:21,3,0	1/1:2,0:2:3.01:71,3,0	./.	./.	1/1:2,0:2:6.02:110,6,0	1/1:1,0:1:3.01:43,3,0	./.	./.
chr10	32240031	.	C	CTTT	6277.41	PASS	AB=0.960;AC=51;AF=0.911;AN=56;BaseQRankSum=-0.211;DP=461;FS=11.586;HRun=17;HaplotypeScore=117.6340;InbreedingCoeff=0.3003;MQ=65.73;MQ0=1;MQRankSum=-1.816;QD=13.95;ReadPosRankSum=-2.542;VQSLOD=0.9860;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,0:10:10.38:89,10,0	1/1:9,0:9:9.03:126,9,0	0/1:25,0:20:4.18:4,0,61	0/1:10,1:8:12.29:54,0,12	1/1:31,0:30:30.36:272,30,0	1/1:17,0:17:34.66:470,35,0	1/1:10,0:10:16.30:211,16,0	1/1:25,0:23:24.23:245,24,0	1/1:15,0:15:15.02:187,15,0	1/1:21,0:22:36.61:438,37,0	1/1:20,0:19:21.14:244,21,0	1/1:12,0:12:19.27:224,19,0	1/1:21,0:21:27.05:354,27,0	1/1:18,0:18:30.01:387,30,0	0/0:11,0:11:0.52:0,1,38	1/1:19,0:19:36.08:466,36,0	1/1:18,0:18:30.45:358,30,0	0/1:3,0:3:0:0,0,0	1/1:22,0:22:19.28:227,19,0	1/1:21,0:21:22.10:254,22,0	1/1:7,0:11:3.89:37,4,0	1/1:5,0:5:3.90:42,4,0	1/1:19,0:19:39.81:470,40,0	1/1:10,0:10:4.25:38,4,0	1/1:17,0:15:12.04:179,12,0	1/1:21,0:22:40.63:510,41,0	1/1:18,8:25:19.61:255,20,0	1/1:9,0:9:12:136,12,0
chr10	32243002	.	A	AG	15000.38	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=3.561;DP=616;FS=36.521;HRun=1;HaplotypeScore=139.9264;InbreedingCoeff=0.9815;MQ=61.39;MQ0=8;MQRankSum=-0.797;QD=29.41;ReadPosRankSum=4.687;VQSLOD=2.3132;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,21:28:57.78:776,58,0	1/1:8,5:12:22.62:298,23,0	0/0:33,0:18:28.41:0,28,405	0/0:45,0:20:42.42:0,42,477	1/1:8,10:17:42.73:507,43,0	1/1:3,17:20:60.10:773,60,0	1/1:9,15:24:46.85:817,47,0	1/1:5,10:15:32.54:337,33,0	1/1:3,14:17:44.99:511,45,0	1/1:8,18:25:69.07:837,69,0	1/1:10,4:13:27.04:348,27,0	1/1:6,18:24:66.16:824,66,0	1/1:3,16:19:47.57:512,48,0	1/1:5,19:24:69.89:796,70,0	0/0:28,0:28:81.25:0,81,1029	1/1:4,17:21:55.71:683,56,0	1/1:4,8:12:29.82:331,30,0	1/1:8,6:13:13.81:307,14,0	1/1:0,14:14:42.06:523,42,0	1/1:11,23:33:79.34:959,79,0	1/1:13,15:28:59.32:753,59,0	1/1:6,7:9:24.06:289,24,0	1/1:1,13:15:35.93:371,36,0	1/1:8,14:21:13.59:499,14,0	1/1:9,24:33:90.70:1080,91,0	1/1:8,19:26:74.39:911,74,0	1/1:5,15:20:60.09:680,60,0	1/1:6,7:12:24.04:277,24,0
chr10	32243003	.	GA	G	12957.69	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=5.625;DP=608;FS=31.050;HRun=1;HaplotypeScore=143.5801;InbreedingCoeff=0.9415;MQ=61.47;MQ0=9;MQRankSum=-0.398;QD=25.76;ReadPosRankSum=5.501;VQSLOD=2.8047;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:28:59.36:677,59,0	1/1:11,1:11:21.74:239,22,0	0/0:33,0:18:31.29:0,31,504	0/0:44,0:19:39.72:0,40,534	1/1:18,0:17:44.63:460,45,0	1/1:20,0:20:56.89:625,57,0	1/1:24,0:24:37.95:626,38,0	1/1:14,0:14:30.60:266,31,0	1/1:16,0:16:45.07:512,45,0	1/1:26,0:25:66.28:698,66,0	1/1:14,0:13:24:190,24,0	1/1:23,0:23:66.04:738,66,0	1/1:16,3:19:48.12:568,48,0	1/1:23,0:23:66.32:691,66,0	0/0:28,0:28:84.22:0,84,1183	1/1:22,0:21:60.39:609,60,0	1/1:12,0:12:29.53:315,30,0	1/1:14,0:13:9.48:215,9,0	1/1:14,0:14:41.78:396,42,0	1/1:33,0:32:76.59:908,77,0	1/1:28,0:28:56.90:549,57,0	1/1:13,0:9:22.84:250,23,0	1/1:15,0:14:36.03:442,36,0	1/1:21,0:20:6:389,6,0	1/1:32,0:32:90.86:1003,91,0	1/1:28,0:27:68.25:708,68,0	1/1:19,1:20:57.95:639,58,0	1/1:13,0:12:21.52:246,22,0
chr10	32243006	.	GGA	G	14120.80	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=7.036;DP=592;FS=26.342;HRun=0;HaplotypeScore=146.2599;InbreedingCoeff=0.9913;MQ=65.39;MQ0=9;MQRankSum=-3.754;QD=28.53;ReadPosRankSum=4.847;VQSLOD=4.0886;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,21:28:69.42:838,69,0	1/1:3,5:10:20.16:239,20,0	0/0:32,0:18:34.85:0,35,532	0/0:38,0:19:35.91:0,36,498	1/1:4,11:17:41.11:487,41,0	1/1:3,17:20:56.60:667,57,0	1/1:8,14:25:65.37:753,65,0	1/1:5,10:17:31.97:360,32,0	1/1:1,14:16:45.01:511,45,0	1/1:1,18:25:65.70:798,66,0	1/1:5,3:12:20.25:188,20,0	1/1:2,18:24:60.62:751,61,0	1/1:6,14:20:53.62:616,54,0	1/1:3,18:23:66.43:726,66,0	0/0:26,0:26:75.21:0,75,1308	1/1:1,18:21:53.10:737,53,0	1/1:1,8:11:29.76:344,30,0	1/1:3,7:12:26.70:321,27,0	1/1:3,10:13:39:457,39,0	1/1:5,23:29:72.91:842,73,0	1/1:9,13:27:50.60:645,51,0	1/1:3,7:8:18.51:208,19,0	1/1:2,13:14:35.86:377,36,0	1/1:5,14:20:31:522,31,0	1/1:3,25:29:82.10:989,82,0	1/1:5,18:27:68.32:848,68,0	1/1:2,15:21:57.55:676,58,0	1/1:4,5:10:20.75:221,21,0
chr10	32243007	.	GA	G	13243.36	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=6.911;DP=585;FS=31.482;HRun=1;HaplotypeScore=138.4088;InbreedingCoeff=0.9914;MQ=67.23;MQ0=9;MQRankSum=-3.357;QD=27.03;ReadPosRankSum=4.745;VQSLOD=2.7919;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:28:68.44:721,68,0	1/1:11,0:10:20.92:247,21,0	0/0:32,0:18:30.27:0,30,544	0/0:37,1:19:37.99:0,38,510	1/1:16,0:15:41.77:438,42,0	1/1:20,0:20:56.64:651,57,0	1/1:24,0:24:62.84:690,63,0	1/1:18,0:18:37.16:337,37,0	1/1:16,0:16:45.09:500,45,0	1/1:26,0:25:65.56:689,66,0	1/1:13,0:12:20.60:198,21,0	1/1:23,0:23:63.07:726,63,0	1/1:17,2:19:53.87:603,54,0	1/1:22,0:22:64.02:722,64,0	0/0:25,0:25:75.21:0,75,1111	1/1:22,0:21:56.83:630,57,0	1/1:12,0:12:29.93:326,30,0	1/1:13,0:12:23.69:251,24,0	1/1:13,0:13:38.98:381,39,0	1/1:32,0:31:78.15:885,78,0	1/1:24,0:24:54.03:559,54,0	1/1:12,0:8:18.53:228,19,0	1/1:15,0:14:36.02:445,36,0	1/1:21,0:20:30.76:449,31,0	1/1:29,0:29:82.02:954,82,0	1/1:27,1:27:67.30:708,67,0	1/1:22,0:22:60.56:664,61,0	1/1:9,1:9:21.04:244,21,0
chr10	32243964	.	T	TA	14414.18	PASS	AC=38;AF=0.704;AN=54;BaseQRankSum=-16.510;DP=776;FS=18.727;HRun=8;HaplotypeScore=67.5736;InbreedingCoeff=0.9871;MQ=76.79;MQ0=0;MQRankSum=-2.945;QD=26.74;ReadPosRankSum=4.474;VQSLOD=3.4988;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,40:45:99:1134,100,0	1/1:4,17:21:51.15:589,51,0	0/0:29,0:29:53.91:0,54,471	0/0:15,0:15:17.89:0,18,212	1/1:4,18:22:54.09:604,54,0	1/1:2,24:26:66.20:762,66,0	1/1:1,25:26:63.19:727,63,0	0/0:31,0:31:75.03:0,75,686	1/1:6,19:25:45.13:518,45,0	1/1:9,27:36:62.04:899,62,0	1/1:4,32:36:93.21:1056,93,0	1/1:2,24:26:60.17:685,60,0	1/1:4,21:25:48.14:551,48,0	1/1:2,16:18:42.12:485,42,0	0/0:29,0:29:77.98:0,78,698	1/1:2,27:29:63.19:727,63,0	1/1:0,28:28:66.20:762,66,0	1/1:5,23:28:8.27:603,8,0	0/0:22,0:22:57:0,57,514	0/0:42,0:42:99:0,117,1056	0/0:32,0:32:87.04:0,87,796	1/1:4,24:28:36.03:789,36,0	1/1:2,27:29:75.22:866,75,0	1/1:0,21:21:54.16:623,54,0	1/1:4,39:43:99:1212,105,0	1/1:2,25:27:72.20:822,72,0	0/0:36,0:36:99:0,102,928	./.
chr10	32245450	.	TA	T	20281.74	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=9.770;DP=670;FS=16.981;HRun=3;HaplotypeScore=133.7150;InbreedingCoeff=0.9929;MQ=88.40;MQ0=0;MQRankSum=-10.392;QD=33.75;ReadPosRankSum=5.633;VQSLOD=2.8354;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,21:21:63.20:781,63,0	1/1:0,19:19:54.17:668,54,0	0/0:24,0:24:71.95:0,72,936	0/0:23,0:23:65.70:0,66,848	1/1:0,30:30:84.26:1040,84,0	1/1:0,32:32:87.27:1077,87,0	1/1:1,18:19:51.16:632,51,0	1/1:1,36:37:99:1264,105,0	1/1:1,20:21:60.19:743,60,0	1/1:3,37:40:99:1356,111,0	1/1:0,24:24:69.22:855,69,0	1/1:0,28:28:75.24:929,75,0	1/1:0,25:25:63.20:779,63,0	1/1:1,20:21:54.17:667,54,0	0/0:22,0:22:66.22:0,66,950	1/1:0,28:28:75.24:929,75,0	1/1:0,20:20:57.18:706,57,0	1/1:0,8:8:21.07:260,21,0	1/1:2,17:19:51.16:627,51,0	1/1:0,22:22:63.20:780,63,0	1/1:0,27:27:75.24:929,75,0	1/1:0,24:24:63.20:774,63,0	1/1:2,27:29:69.05:855,69,0	1/1:1,22:23:60.19:742,60,0	1/1:0,23:23:63.20:780,63,0	1/1:1,22:23:66.19:806,66,0	1/1:2,31:33:90.28:1115,90,0	1/1:0,5:5:15.05:186,15,0
chr10	32245931	.	CCTCT	C	1925.98	PASS	AB=0.865;AC=36;AF=0.720;AN=50;BaseQRankSum=-1.470;DP=480;FS=22.835;HRun=0;HaplotypeScore=90.2972;InbreedingCoeff=0.3003;MQ=57.72;MQ0=19;MQRankSum=0.825;QD=6.11;ReadPosRankSum=0.852;VQSLOD=0.3681;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:14,13:24:6.02:86,6,0	1/1:5,0:5:3.01:47,3,0	./.	./.	1/1:18,0:18:17.90:205,18,0	1/1:19,6:25:5.95:64,6,0	1/1:11,0:11:3.01:38,3,0	0/0:30,0:28:14.73:0,15,107	1/1:10,0:10:8.80:105,9,0	1/1:13,0:13:5.83:38,6,0	1/1:6,8:14:2.92:17,3,0	0/1:5,7:12:17.93:42,0,18	0/1:6,1:6:8.44:68,0,8	1/1:15,0:14:11.90:158,12,0	0/0:20,0:20:23.82:0,24,393	1/1:9,5:13:6.02:95,6,0	0/1:19,1:20:22.80:232,0,23	0/1:15,0:12:71.02:71,0,183	0/0:15,0:15:5.24:0,5,33	0/0:17,0:16:4.02:0,4,28	1/1:16,0:14:0.47:1,0,0	1/1:10,11:20:5.90:40,6,0	1/1:15,0:14:15.05:225,15,0	1/1:5,8:13:3.01:47,3,0	1/1:19,0:20:12.02:186,12,0	1/1:11,12:22:22.79:313,23,0	0/0:4,0:16:2.37:0,2,8	./.
chr10	32246008	.	CTCTCTCTT	C	218.40	PASS	AB=0.947;AC=12;AF=0.231;AN=52;BaseQRankSum=-0.337;DP=405;FS=2.865;HRun=0;HaplotypeScore=123.6460;InbreedingCoeff=0.1431;MQ=34.81;MQ0=52;MQRankSum=-3.724;QD=2.12;ReadPosRankSum=-2.663;VQSLOD=1.7948;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:19:17.76:0,18,139	0/1:5,0:4:3.23:10,0,3	./.	./.	0/0:14,0:11:17.94:0,18,148	0/1:25,0:21:16.22:16,0,101	0/0:18,0:14:31.86:0,32,324	0/1:15,0:13:27.44:147,0,27	0/0:12,0:11:20.92:0,21,270	0/0:18,0:17:40.78:0,41,665	0/0:14,0:14:19.71:0,20,327	0/1:15,0:12:3.62:4,0,123	0/0:15,0:13:16.53:0,17,233	0/0:18,0:14:21.32:0,21,578	0/0:17,0:15:14.41:0,14,486	0/0:27,0:25:37.76:0,38,343	0/0:25,0:19:43.29:0,43,439	0/0:8,0:5:6:0,6,52	0/1:7,6:9:13.91:142,0,14	0/1:11,0:9:8.19:8,0,16	1/1:8,0:5:0.27:1,0,0	0/0:17,0:12:14.92:0,15,86	0/0:23,0:22:29.59:0,30,212	0/0:23,0:14:4.88:0,5,29	0/0:17,0:16:3.47:0,3,206	0/0:12,0:11:17.91:0,18,218	1/1:6,0:4:1.70:5,2,0	1/1:5,0:2:0.47:1,0,0
chr10	32246041	.	TCACACACACA	T	1444.15	PASS	AC=24;AF=0.706;AN=34;BaseQRankSum=-0.127;DP=440;FS=7.129;HRun=0;HaplotypeScore=128.7753;InbreedingCoeff=0.3940;MQ=30.68;MQ0=60;MQRankSum=0.433;QD=6.09;ReadPosRankSum=-1.402;VQSLOD=1.2033;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:30,1:23:3.48:82,3,0	./.	./.	./.	./.	1/1:23,2:21:6.49:173,6,0	0/0:22,1:19:0.89:0,1,2	./.	1/1:14,0:14:3.01:88,3,0	0/0:11,0:11:2.19:0,2,4	1/1:14,1:15:3.90:89,4,0	./.	1/1:16,2:17:9.50:252,10,0	1/1:14,0:13:3.01:87,3,0	0/0:20,0:18:5.36:0,5,92	1/1:19,2:20:6.02:173,6,0	0/0:20,0:17:0:0,0,0	./.	./.	./.	./.	1/1:17,0:13:3.48:83,3,0	./.	1/1:34,1:21:0.30:0,0,0	1/1:22,0:21:9.03:206,9,0	1/1:11,1:14:7.65:242,8,0	1/1:7,0:6:3.01:70,3,0	0/0:7,0:5:4.83:0,5,72
chr10	32252834	.	C	CTATG	3151.92	PASS	AB=0.864;AC=13;AF=0.241;AN=54;BaseQRankSum=-5.003;DP=539;FS=2.784;HRun=0;HaplotypeScore=99.7926;InbreedingCoeff=0.8188;MQ=74.79;MQ0=6;MQRankSum=0.704;QD=23.18;ReadPosRankSum=-0.753;VQSLOD=3.4028;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:21.07:0,21,328	0/0:11,0:11:18.06:0,18,284	1/1:24,0:16:1.25:3,1,0	0/0:26,0:17:6.02:0,6,90	0/0:25,0:26:32.87:0,33,510	0/0:30,0:31:47.96:0,48,710	0/0:16,0:15:15.05:0,15,221	0/0:28,0:28:21.06:0,21,307	0/0:22,0:22:36.12:0,36,560	0/0:21,0:21:48.15:0,48,735	0/0:22,0:22:30.04:0,30,455	1/1:16,6:22:33.11:735,33,0	1/1:16,6:22:30.10:639,30,0	0/1:16,3:19:29.28:314,0,29	0/0:24,0:24:48.16:0,48,750	0/0:17,0:17:26.90:0,27,397	0/0:14,0:14:12.04:0,12,189	0/0:6,0:6:14.84:0,15,207	0/0:14,0:14:15.05:0,15,237	0/0:21,0:21:33.11:0,33,519	0/0:17,0:17:21.07:0,21,330	1/1:6,6:12:24.08:546,24,0	1/1:10,7:17:30.10:663,30,0	1/1:8,12:20:18.06:428,18,0	0/0:22,0:22:33.11:0,33,521	0/0:18,0:18:33.09:0,33,467	0/0:24,0:24:33.06:0,33,465	./.
chr10	32252883	.	A	AACACACACAC	7196.19	PASS	AB=1.000;AC=49;AF=0.942;AN=52;BaseQRankSum=-6.893;DP=547;FS=12.808;HRun=0;HaplotypeScore=194.2257;InbreedingCoeff=0.2552;MQ=48.36;MQ0=5;MQRankSum=-3.017;QD=15.12;ReadPosRankSum=-1.724;VQSLOD=2.2415;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:12,0:12:8.57:181,9,0	1/1:8,2:10:0.95:85,1,0	./.	./.	1/1:22,6:31:5.55:238,6,0	1/1:19,4:24:8.97:243,9,0	1/1:15,0:13:10.52:266,11,0	1/1:26,0:26:12.04:343,12,0	1/1:17,3:21:9.35:362,9,0	1/1:26,1:31:28.32:769,28,0	1/1:15,2:19:5.38:147,5,0	1/1:10,8:20:21.07:613,21,0	1/1:18,5:22:7.79:167,8,0	1/1:10,3:15:6.12:244,6,0	0/0:17,0:38:55.54:0,56,1182	1/1:11,7:18:14.28:490,14,0	1/1:11,2:13:9.02:284,9,0	0/1:6,0:6:3.93:28,0,4	1/1:16,0:15:13.40:276,13,0	1/1:17,0:24:16.75:360,17,0	1/1:12,0:13:1.82:69,2,0	1/1:15,1:19:6.58:210,7,0	1/1:11,3:14:4.88:174,5,0	1/1:21,0:22:11.94:107,12,0	1/1:19,4:27:20.10:578,20,0	1/1:24,0:21:15.72:320,16,0	1/1:14,0:20:25.64:548,26,0	1/1:2,0:2:3.01:91,3,0
chr10	32253010	.	CG	C	3661.16	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=7.075;DP=621;FS=0.835;HRun=3;HaplotypeScore=63.8416;InbreedingCoeff=0.9988;MQ=81.17;MQ0=0;MQRankSum=-1.710;QD=33.59;ReadPosRankSum=1.474;VQSLOD=4.1447;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:33.07:0,33,410	0/0:7,0:7:21.07:0,21,302	0/0:30,0:30:78.22:0,78,1055	0/0:19,0:19:51.13:0,51,685	0/0:30,0:30:72.15:0,72,922	0/0:31,0:30:90.24:0,90,1206	0/0:13,0:13:39.13:0,39,561	1/1:1,25:26:66.21:816,66,0	0/0:20,0:19:57.17:0,57,782	0/0:39,0:39:99:0,108,1451	0/0:21,0:21:51.13:0,51,665	0/0:24,0:24:68.96:0,69,971	0/0:20,0:20:54.11:0,54,686	0/0:20,0:20:57.16:0,57,769	0/0:30,0:30:81.23:0,81,1098	0/0:29,0:28:75.23:0,75,1042	0/0:24,0:24:69.21:0,69,958	0/0:13,0:13:39.08:0,39,519	1/1:1,11:12:33.10:408,33,0	1/1:1,29:30:84.05:1040,84,0	1/1:2,15:17:45.14:557,45,0	0/0:22,0:22:63.13:0,63,786	0/0:25,0:25:69.22:0,69,976	0/0:20,0:20:54.11:0,54,685	0/0:29,0:29:87.22:0,87,1164	0/0:22,0:20:54.14:0,54,694	1/1:1,23:24:69.21:839,69,0	0/0:10,0:10:30.07:0,30,394
chr10	32254279	.	G	GA	6054.45	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=7.589;DP=745;FS=0.000;HRun=0;HaplotypeScore=84.4081;InbreedingCoeff=0.9867;MQ=71.24;MQ0=0;MQRankSum=-0.556;QD=45.52;ReadPosRankSum=-1.077;VQSLOD=4.2467;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,132,1841	0/0:8,0:8:24.08:0,24,336	0/0:38,0:35:96.05:0,96,1294	0/0:28,0:28:75.25:0,75,1035	0/0:23,0:23:60.12:0,60,820	0/0:17,0:17:51.14:0,51,677	0/0:24,0:24:72.24:0,72,1007	1/1:2,34:36:99:1629,102,0	0/0:17,0:17:51.17:0,51,711	0/0:30,0:30:84.27:0,84,1160	0/0:21,0:21:60.20:0,60,837	0/0:27,0:27:78.26:0,78,1090	0/0:36,0:36:99:0,105,1467	0/0:23,0:23:66.20:0,66,905	0/0:28,0:28:81.25:0,81,1114	0/0:37,0:37:99:0,111,1552	0/0:31,1:32:90.30:0,90,1256	0/0:19,2:21:9.25:0,9,705	1/1:0,20:20:60.20:952,60,0	1/1:0,34:34:99:1580,99,0	1/1:3,19:22:60.19:936,60,0	0/0:25,0:25:69.23:0,69,962	0/0:20,0:20:60.20:0,60,838	0/0:32,0:32:96.32:0,96,1342	0/0:33,0:33:93.28:0,93,1276	0/0:30,0:30:87.25:0,87,1191	1/1:0,21:21:60.20:957,60,0	0/0:17,0:17:51.17:0,51,713
chr10	32259490	.	TGTGAGAGAGAGAGA	T	4838.91	PASS	AB=0.819;AC=31;AF=0.646;AN=48;BaseQRankSum=-2.190;DP=476;FS=5.309;HRun=0;HaplotypeScore=169.4825;InbreedingCoeff=0.2315;MQ=43.68;MQ0=29;MQRankSum=-0.347;QD=14.07;ReadPosRankSum=3.591;VQSLOD=3.4756;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:10,9:17:2.55:0,3,19	./.	./.	./.	1/1:9,0:9:14.93:117,15,0	0/1:7,19:26:19.65:121,0,20	1/1:18,0:13:17.49:128,17,0	0/0:27,0:23:54.21:0,54,583	1/1:3,13:15:9.03:344,9,0	1/1:5,19:23:48.01:947,48,0	1/1:16,0:16:17.91:179,18,0	./.	0/1:8,17:25:4.15:395,0,4	0/0:0,14:14:0.54:0,1,1	0/0:21,0:19:9.38:0,9,1098	1/1:14,0:13:11.99:105,12,0	0/1:5,9:13:99:115,0,153	1/1:13,0:10:3.17:391,3,0	0/1:15,0:14:99:132,0,195	0/1:25,0:25:52.74:53,0,377	0/1:15,0:10:9.56:10,0,87	1/1:18,0:17:26.73:211,27,0	0/1:20,0:20:9.63:135,0,10	1/1:24,0:23:11.51:93,12,0	1/1:18,0:17:23.25:264,23,0	1/1:27,0:25:40.49:971,40,0	0/0:21,0:18:44.39:0,44,491	1/1:0,5:5:3.01:127,3,0
chr10	32259492	.	TGAGAGAGAGAGA	T	3093.39	PASS	AB=0.887;AC=31;AF=0.674;AN=46;BaseQRankSum=0.621;DP=480;FS=21.813;HRun=0;HaplotypeScore=167.7523;InbreedingCoeff=0.2615;MQ=43.74;MQ0=28;MQRankSum=-3.456;QD=8.79;ReadPosRankSum=3.693;VQSLOD=1.2093;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:19,1:17:0.18:0,0,0	./.	./.	./.	0/1:5,2:10:0.01:0,0,0	1/1:27,0:26:1.70:93,2,0	./.	0/0:23,0:22:24.06:0,24,381	1/1:15,1:15:9.03:287,9,0	1/1:22,1:23:20.17:692,20,0	1/1:12,4:16:3.01:60,3,0	./.	1/1:19,2:24:12.04:383,12,0	0/0:14,0:14:0.82:0,1,1	0/0:21,0:19:21.07:0,21,899	1/1:9,5:13:1.99:6,2,0	0/1:15,0:14:86.09:86,0,136	1/1:8,3:10:12.04:379,12,0	0/1:14,0:14:99:163,0,154	0/1:26,0:28:59.40:59,0,259	0/1:15,0:10:18.53:19,0,25	0/1:11,6:17:0:0,0,0	1/1:16,3:20:2.67:83,3,0	1/1:20,3:23:0.38:1,0,0	1/1:9,8:17:2.74:95,3,0	1/1:20,8:26:23.94:726,24,0	0/0:19,1:18:23.46:0,23,221	1/1:5,0:5:3.01:95,3,0
chr10	32262083	.	T	TGTGGGCTAATATTAAGAGGAAAG	1465.84	PASS	AB=0.700;AC=25;AF=0.962;AN=26;BaseQRankSum=-2.346;DP=35;FS=9.560;HRun=0;HaplotypeScore=31.5718;InbreedingCoeff=-0.2016;MQ=147.18;MQ0=0;MQRankSum=-0.927;QD=50.55;ReadPosRankSum=-1.037;VQSLOD=0.1933;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	1/1:1,1:4:9.03:512,9,0	0/1:4,0:7:48.49:486,0,48	./.	./.	./.	1/1:1,0:1:3.01:40,3,0	./.	1/1:3,0:3:9.01:106,9,0	./.	./.	./.	1/1:3,0:3:6:73,6,0	1/1:1,0:1:3.01:38,3,0	1/1:1,0:1:3.01:49,3,0	./.	./.	1/1:1,0:1:2.99:23,3,0	1/1:1,0:1:3:25,3,0	./.	./.	1/1:2,0:2:3:25,3,0	./.	1/1:2,0:2:3.01:77,3,0	1/1:1,0:1:3.01:47,3,0	1/1:2,0:2:3.01:48,3,0	./.
chr10	32264535	.	CA	C	24273.45	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=5.514;DP=751;FS=2.895;HRun=2;HaplotypeScore=75.1416;InbreedingCoeff=0.9996;MQ=76.93;MQ0=0;MQRankSum=-6.746;QD=35.49;ReadPosRankSum=3.795;VQSLOD=5.4997;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,27:27:75.24:973,75,0	1/1:0,13:13:30.10:390,30,0	0/0:13,0:13:36.12:0,36,507	0/0:19,0:19:51.13:0,51,707	1/1:0,34:34:99:1263,99,0	1/1:0,34:34:93.30:1207,93,0	1/1:0,27:27:72.23:935,72,0	1/1:0,34:34:99:1256,99,0	1/1:0,30:30:81.26:1051,81,0	1/1:1,34:35:99:1309,102,0	1/1:0,22:22:63.20:818,63,0	1/1:0,26:26:69.22:896,69,0	1/1:0,22:22:63.20:818,63,0	1/1:0,27:27:78.25:1012,78,0	0/0:35,0:35:99:0,105,1553	1/1:1,25:26:69.22:896,69,0	1/1:1,28:29:78.25:1013,78,0	1/1:0,23:23:63.16:798,63,0	1/1:0,24:24:72.23:935,72,0	1/1:1,34:35:96.31:1240,96,0	1/1:0,30:30:87.28:1130,87,0	1/1:1,27:28:78.21:994,78,0	1/1:2,24:26:66.21:857,66,0	1/1:0,22:22:60.20:779,60,0	1/1:0,28:28:75.24:974,75,0	1/1:0,31:31:93.25:1174,93,0	1/1:2,38:40:90.17:1168,90,0	1/1:0,11:11:30.10:389,30,0
chr10	32265585	.	G	GCACACA	4985.97	PASS	AB=1.000;AC=11;AF=0.204;AN=54;BaseQRankSum=-8.694;DP=813;FS=1.992;HRun=0;HaplotypeScore=217.9439;InbreedingCoeff=0.8854;MQ=63.11;MQ0=1;MQRankSum=-8.056;QD=26.81;ReadPosRankSum=-5.810;VQSLOD=3.6214;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:57:99:0,144,2960	0/0:11,0:11:33.08:0,33,601	0/0:41,0:20:16.76:0,17,477	0/1:31,0:22:10.25:10,0,325	0/0:19,0:19:42.14:0,42,892	0/0:27,0:27:60.19:0,60,1246	0/0:36,0:36:72.23:0,72,1486	1/1:17,14:36:67.58:1313,68,0	0/0:17,0:17:40.82:0,41,840	0/0:30,0:30:48.80:0,49,1194	0/0:12,0:12:30.09:0,30,604	0/0:27,0:28:69.21:0,69,1353	0/0:33,0:34:87.28:0,87,1803	0/0:34,0:35:90.27:0,90,1824	0/0:39,0:39:99:0,99,1989	0/0:27,0:28:69.20:0,69,1340	0/0:29,0:31:54.38:0,54,1268	0/0:18,0:18:54.16:0,54,1101	1/1:5,12:18:48.06:1141,48,0	1/1:6,11:18:15.01:377,15,0	1/1:18,20:48:15.30:268,15,0	0/0:38,0:39:99:0,102,2060	0/0:18,0:18:36.12:0,36,768	0/0:40,0:41:99:0,105,2229	0/0:26,0:26:66.23:0,66,1401	0/0:36,0:36:37.83:0,38,1572	1/1:7,19:33:63.17:1876,63,0	./.
chr10	32269980	.	T	TGCAAAGG	12785.95	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-5.033;DP=747;FS=0.355;HRun=0;HaplotypeScore=164.1015;InbreedingCoeff=0.9975;MQ=90.32;MQ0=0;MQRankSum=-13.660;QD=90.04;ReadPosRankSum=-6.130;VQSLOD=3.2926;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,135,3365	0/0:16,0:16:48.16:0,48,1261	0/0:32,0:33:76.10:0,76,1938	0/0:31,0:32:87.27:0,87,2034	0/0:35,0:35:99:0,105,2707	0/0:23,0:23:69.24:0,69,1784	0/0:26,0:26:78.24:0,78,1891	1/1:13,20:51:99:5102,150,0	0/0:21,0:21:63.22:0,63,1662	0/0:39,0:39:99:0,105,2662	0/0:20,0:20:57.18:0,57,1422	0/0:29,0:29:87.27:0,87,2186	0/0:27,0:27:81.22:0,81,1994	0/0:30,0:30:87.27:0,87,2186	0/0:39,0:39:99:0,111,2844	0/0:22,0:22:66.23:0,66,1741	0/0:14,0:14:39.13:0,39,1029	0/0:15,0:15:17.19:0,17,928	1/1:8,5:18:51.09:1582,51,0	1/1:3,16:26:69.09:2311,69,0	1/1:5,8:18:27.09:1051,27,0	0/0:19,0:19:57.14:0,57,1416	0/0:26,0:26:75.23:0,75,1820	0/0:28,0:28:81.26:0,81,2081	0/0:19,0:19:57.18:0,57,1450	0/0:32,0:32:93.30:0,93,2373	1/1:6,17:28:72.16:2739,72,0	0/0:15,0:15:45.15:0,45,1187
chr10	32270954	.	CA	C	4608.72	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=9.831;DP=731;FS=28.771;HRun=3;HaplotypeScore=97.3584;InbreedingCoeff=0.9997;MQ=85.21;MQ0=0;MQRankSum=-1.370;QD=33.40;ReadPosRankSum=-1.232;VQSLOD=2.4981;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:54.18:0,54,777	0/0:13,0:13:39.12:0,39,545	0/0:26,0:26:71.57:0,72,916	0/0:21,0:21:60.15:0,60,799	0/0:38,0:38:99:0,111,1579	0/0:21,0:21:60.19:0,60,845	0/0:21,0:21:63.21:0,63,902	1/1:2,24:26:72.23:892,72,0	0/0:24,0:24:72.20:0,72,1010	0/0:39,0:39:99:0,114,1611	0/0:27,0:27:78.26:0,78,1121	0/0:44,0:44:99:0,129,1851	0/0:33,0:33:93.28:0,93,1317	0/0:37,0:37:99:0,105,1487	0/0:32,0:32:93.31:0,93,1324	0/0:24,0:24:69.23:0,69,994	0/0:24,0:24:66.16:0,66,891	0/0:24,0:24:63.21:0,63,907	1/1:0,18:18:54.12:631,54,0	1/1:2,28:30:81.25:1004,81,0	1/1:0,25:25:66.21:818,66,0	0/0:25,0:25:72.24:0,72,1036	0/0:31,0:31:93.31:0,93,1336	0/0:10,0:10:27.09:0,27,387	0/0:27,0:27:78.24:0,78,1097	0/0:21,0:21:60.19:0,60,846	1/1:0,39:39:99:1264,102,0	0/0:12,0:12:33.08:0,33,454
chr10	32271023	.	TCGTGTG	T	4102.72	PASS	AB=0.985;AC=19;AF=0.339;AN=56;BaseQRankSum=12.079;DP=629;FS=2.491;HRun=0;HaplotypeScore=182.4693;InbreedingCoeff=-0.5140;MQ=58.93;MQ0=3;MQRankSum=-12.114;QD=8.79;ReadPosRankSum=2.439;VQSLOD=2.9014;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:35,0:35:63.22:63,0,235	0/1:14,0:14:80.42:139,0,80	0/0:17,0:14:35.20:0,35,484	0/0:14,0:13:36.01:0,36,441	0/1:24,0:24:99:106,0,170	0/1:20,0:20:99:220,0,105	0/1:21,0:21:99:343,0,109	0/0:20,0:20:57.35:0,57,567	0/1:28,0:28:99:376,0,132	0/1:28,0:28:99:276,0,384	0/0:14,0:13:13.63:0,14,112	0/1:39,0:39:99:361,0,301	0/1:29,0:29:99:444,0,185	0/1:25,0:25:99:218,0,157	0/0:21,0:21:63:0,63,1403	0/1:29,0:28:99:424,0,226	0/1:23,0:23:99:201,0,231	0/1:19,0:19:99:135,0,267	0/0:15,0:15:42.03:0,42,500	0/0:16,0:16:29.94:0,30,435	0/0:30,0:28:31.84:0,32,529	0/1:27,0:27:15.24:15,0,189	0/1:21,0:21:23.99:24,0,133	0/1:25,0:25:61.50:76,0,62	0/1:24,0:24:99:248,0,102	0/1:24,0:23:99:295,0,269	0/0:14,0:14:32.21:0,32,370	0/1:7,5:12:55.37:139,0,55
chr10	32271024	.	CGTGTGT	C	6894.49	PASS	AB=0.754;AC=37;AF=0.661;AN=56;BaseQRankSum=1.787;DP=643;FS=0.647;HRun=0;HaplotypeScore=177.8012;InbreedingCoeff=0.6831;MQ=58.17;MQ0=4;MQRankSum=-4.244;QD=14.36;ReadPosRankSum=1.462;VQSLOD=4.1419;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:24,10:34:5.11:147,0,5	1/1:4,7:13:15.03:251,15,0	0/0:19,0:14:12.04:0,12,184	0/0:13,0:13:6.02:0,6,101	1/1:11,13:24:8.87:185,9,0	1/1:10,10:20:18.06:358,18,0	1/1:13,7:21:34.34:561,34,0	0/0:21,0:20:24.44:0,24,350	1/1:10,18:28:30.10:604,30,0	1/1:19,10:29:30.03:507,30,0	1/1:7,6:13:2.86:17,3,0	1/1:22,16:38:35.95:651,36,0	1/1:14,15:29:33.11:685,33,0	1/1:10,14:25:20.81:374,21,0	0/0:21,0:21:39.12:0,39,1041	1/1:13,14:28:34:663,34,0	0/1:14,8:23:0.89:313,0,1	0/1:14,6:20:44.81:229,0,45	0/0:17,0:16:15.18:0,15,206	0/0:17,0:21:17.17:0,17,325	0/0:32,0:29:18.06:0,18,393	1/1:12,15:27:3.01:62,3,0	1/1:10,9:21:2.91:61,3,0	1/1:11,13:25:12.81:167,13,0	1/1:9,15:24:20.73:386,21,0	1/1:15,9:23:29.46:472,29,0	0/0:17,0:18:11.88:0,12,174	1/1:10,2:12:11.93:200,12,0
chr10	32271055	.	GTGTGTA	G	4326.93	PASS	AB=0.983;AC=20;AF=0.357;AN=56;BaseQRankSum=13.876;DP=727;FS=71.349;HRun=0;HaplotypeScore=194.1338;InbreedingCoeff=-0.4148;MQ=48.73;MQ0=23;MQRankSum=-11.807;QD=9.31;ReadPosRankSum=8.030;VQSLOD=1.2478;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:39,1:41:42.49:42,0,369	1/1:9,0:9:14.99:182,15,0	0/0:43,0:12:22.23:0,22,321	0/0:40,0:14:10.01:0,10,219	0/1:24,0:24:98.14:98,0,169	0/1:21,2:23:99:243,0,140	0/1:23,0:23:84.56:352,0,85	0/0:25,0:23:62.51:0,63,692	0/1:27,0:27:99:414,0,125	0/1:20,0:20:99:225,0,163	0/0:17,0:16:1.73:0,2,151	0/1:31,2:34:99:477,0,201	0/1:33,0:34:99:476,0,254	0/1:29,0:29:99:275,0,179	0/0:30,0:29:83.92:0,84,1429	0/1:24,0:23:99:454,0,108	0/1:19,0:19:76.30:195,0,76	0/1:17,0:17:99:128,0,195	0/0:24,0:22:45.10:0,45,548	0/0:19,0:19:15.83:0,16,337	0/0:46,0:39:53.94:0,54,715	0/1:33,0:33:4.10:4,0,343	0/1:18,0:18:26.41:26,0,83	0/1:25,0:25:83.41:83,0,84	0/1:26,2:28:99:280,0,161	0/1:25,0:24:99:228,0,305	0/0:17,0:17:24.27:0,24,308	0/1:12,0:12:34.46:142,0,34
chr10	32271825	.	G	GA	16895.17	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-9.080;DP=625;FS=0.576;HRun=7;HaplotypeScore=56.4912;InbreedingCoeff=0.9924;MQ=79.52;MQ0=0;MQRankSum=-5.936;QD=29.59;ReadPosRankSum=3.685;VQSLOD=5.2261;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,19:20:54.10:634,54,0	1/1:0,14:14:33.09:399,33,0	0/0:20,0:21:47.74:0,48,416	0/0:12,0:12:21.03:0,21,203	1/1:2,30:32:84.26:1011,84,0	1/1:3,27:30:66.20:797,66,0	1/1:2,15:17:39.12:471,39,0	1/1:4,28:31:84.20:964,84,0	1/1:2,16:18:39.12:471,39,0	1/1:6,20:26:57.15:670,57,0	1/1:1,22:24:69.08:812,69,0	1/1:1,26:27:66.20:797,66,0	1/1:3,23:26:69.21:831,69,0	1/1:0,28:28:81.25:979,81,0	0/0:21,0:21:63.04:0,63,593	1/1:2,17:19:42.13:507,42,0	1/1:3,17:20:45.14:544,45,0	1/1:1,13:14:39.12:471,39,0	1/1:4,19:23:57.16:669,57,0	1/1:2,26:28:75.23:906,75,0	1/1:2,12:14:30.09:362,30,0	1/1:4,22:26:66.20:797,66,0	1/1:4,19:23:38.85:471,39,0	1/1:2,13:15:33.10:399,33,0	1/1:2,20:22:57.17:689,57,0	1/1:5,24:29:72.22:870,72,0	1/1:2,35:35:99:1194,99,0	1/1:0,7:7:15.05:181,15,0
chr10	32272347	.	C	CAT	10124.81	PASS	AB=1.000;AC=49;AF=0.875;AN=56;BaseQRankSum=3.349;DP=645;FS=11.568;HRun=0;HaplotypeScore=186.3095;InbreedingCoeff=0.7629;MQ=51.33;MQ0=11;MQRankSum=-0.236;QD=17.19;ReadPosRankSum=0.365;VQSLOD=4.0802;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:37,4:41:56:511,56,0	1/1:4,0:4:5.95:44,6,0	0/0:14,0:8:21.04:0,21,222	0/0:20,0:13:36.02:0,36,359	1/1:19,1:21:29.59:317,30,0	1/1:18,2:20:47.74:436,48,0	1/1:27,0:28:42.49:578,42,0	1/1:29,0:28:21.98:443,22,0	1/1:27,3:30:67.17:642,67,0	1/1:29,0:30:51.72:615,52,0	1/1:15,2:16:11.81:268,12,0	1/1:24,3:27:44.38:538,44,0	1/1:20,3:23:50.53:523,51,0	1/1:21,2:21:41.72:372,42,0	0/0:22,0:22:50.56:0,51,483	1/1:24,6:30:36.80:562,37,0	1/1:18,3:21:37.53:499,38,0	1/1:16,3:20:45.19:525,45,0	0/1:25,0:22:12.85:294,0,13	1/1:23,0:23:13.31:126,13,0	1/1:26,0:26:28.24:217,28,0	1/1:21,5:26:35.77:480,36,0	1/1:16,3:18:35.78:410,36,0	1/1:23,3:25:32.17:455,32,0	1/1:15,1:16:16.02:257,16,0	1/1:22,1:24:13.85:479,14,0	1/1:32,0:33:43.24:491,43,0	1/1:4,0:4:5.95:42,6,0
chr10	32272389	.	TAA	T	22765.79	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=13.604;DP=624;FS=9.782;HRun=2;HaplotypeScore=169.3476;InbreedingCoeff=0.9912;MQ=89.87;MQ0=0;MQRankSum=-12.016;QD=42.55;ReadPosRankSum=4.996;VQSLOD=3.7369;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,47:46:99:1689,114,0	1/1:0,7:7:18.06:293,18,0	0/0:35,0:35:99:0,105,1941	0/0:26,0:26:78.22:0,78,1455	1/1:0,24:24:63.17:971,63,0	1/1:1,16:17:39.13:635,39,0	1/1:0,26:26:69.23:1110,69,0	1/1:0,30:30:78.18:1145,78,0	1/1:1,23:24:72.19:1119,72,0	1/1:0,27:27:81.27:1290,81,0	1/1:0,13:13:39.09:605,39,0	1/1:0,20:21:60.16:944,60,0	1/1:0,20:20:54.15:850,54,0	1/1:0,23:23:63.17:995,63,0	0/0:28,0:28:81.28:0,81,1644	1/1:1,30:31:93.27:1461,93,0	1/1:0,22:22:57.19:928,57,0	1/1:1,20:21:57.15:899,57,0	1/1:0,12:12:33.10:515,33,0	1/1:0,16:16:45.15:731,45,0	1/1:0,16:16:36.04:528,36,0	1/1:0,12:12:36.04:527,36,0	1/1:0,22:22:60.16:922,60,0	1/1:2,14:16:36.10:559,36,0	1/1:0,20:20:60.12:919,60,0	1/1:0,29:29:84.26:1318,84,0	1/1:0,34:34:99:1599,102,0	1/1:0,5:5:15.01:215,15,0
chr10	32272766	.	TTCTCTC	T	2217.55	PASS	AB=1.000;AC=28;AF=0.667;AN=42;BaseQRankSum=1.908;DP=518;FS=12.507;HRun=0;HaplotypeScore=114.2739;InbreedingCoeff=0.4524;MQ=62.84;MQ0=17;MQRankSum=0.785;QD=8.73;ReadPosRankSum=3.345;VQSLOD=1.2964;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:14:6.49:105,6,0	1/1:6,0:6:6.02:120,6,0	./.	./.	0/1:17,0:17:0:0,0,0	1/1:18,0:15:3.01:59,3,0	1/1:15,0:15:11.88:134,12,0	0/0:32,0:32:2.92:0,3,8	./.	1/1:15,0:15:13.77:246,14,0	1/1:13,0:12:5.51:69,6,0	1/1:15,0:17:12.04:223,12,0	1/1:15,0:15:11.97:180,12,0	1/1:21,1:22:3.01:60,3,0	0/0:25,0:24:0.64:0,1,409	1/1:17,1:18:3.01:60,3,0	1/1:28,0:27:19.78:371,20,0	0/1:14,0:13:59.46:146,0,59	0/0:14,0:14:9.03:0,9,231	./.	0/0:26,0:23:6.02:0,6,108	./.	1/1:14,0:14:2.12:58,2,0	0/0:15,0:15:0:0,0,0	./.	1/1:24,0:24:26.47:516,26,0	0/0:18,0:18:8.92:0,9,154	./.
chr10	32272804	.	CTCTCTCTCTCTGTGTGTG	C	4333.97	PASS	AB=1.000;AC=20;AF=0.385;AN=52;BaseQRankSum=3.985;DP=604;FS=1.167;HRun=0;HaplotypeScore=207.9539;InbreedingCoeff=-0.2220;MQ=46.69;MQ0=46;MQRankSum=0.862;QD=11.00;ReadPosRankSum=0.623;VQSLOD=3.9661;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:28:22.34:22,0,56	1/1:9,0:9:5.60:108,6,0	./.	./.	0/1:25,0:24:0:0,0,0	0/0:20,0:16:3.01:0,3,32	0/1:26,0:23:57.71:58,0,75	0/1:21,0:18:99:403,0,102	0/0:26,0:24:2.65:0,3,25	1/1:30,0:29:6.17:884,6,0	0/1:27,0:26:49.66:71,0,50	0/1:24,0:21:7.16:41,0,7	0/1:23,0:23:10.81:132,0,11	0/0:27,0:27:8.69:0,9,101	0/0:37,0:36:54.65:0,55,2247	0/1:19,0:18:28.25:72,0,28	0/1:37,0:32:34.12:174,0,34	0/1:15,0:13:99:343,0,176	0/1:18,0:14:99:201,0,502	1/1:13,0:13:3.01:72,3,0	0/0:23,0:18:20.26:0,20,504	0/0:23,0:23:1.30:0,1,13	0/0:3,14:17:3.65:0,4,10	0/0:26,0:24:5.98:0,6,46	0/1:21,0:19:3.92:239,0,4	0/1:35,0:34:62.43:1100,0,62	0/1:21,0:18:99:415,0,343	0/0:9,0:6:1.55:0,2,4
chr10	32272806	.	CTCTCTCTCTGTGTG	C	4989.73	PASS	AB=0.957;AC=34;AF=0.654;AN=52;BaseQRankSum=4.153;DP=597;FS=3.057;HRun=0;HaplotypeScore=185.2138;InbreedingCoeff=0.0131;MQ=47.07;MQ0=45;MQRankSum=1.313;QD=9.94;ReadPosRankSum=1.744;VQSLOD=3.5103;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:27:14.01:84,0,14	1/1:9,0:9:6.56:140,7,0	./.	./.	0/1:6,19:24:0:0,0,0	1/1:17,0:13:2.90:16,3,0	0/1:26,0:23:20.68:127,0,21	0/1:20,0:17:19.72:235,0,20	1/1:7,0:24:2.45:10,2,0	1/1:27,1:27:49.44:883,49,0	0/1:27,0:26:5.44:77,0,5	1/1:25,0:22:11.97:156,12,0	1/1:23,0:23:14.99:251,15,0	0/1:27,0:27:11.44:11,0,17	0/0:36,0:35:52.73:0,53,1688	0/1:21,0:20:6.95:128,0,7	1/1:37,0:32:4.98:333,5,0	0/1:15,0:13:81.79:532,0,82	0/1:18,0:14:99:141,0,363	1/1:13,0:13:3.01:54,3,0	0/0:22,0:17:16.61:0,17,337	1/1:25,0:25:0.94:2,1,0	1/1:17,0:17:0.76:33,1,0	0/0:28,0:26:0:0,0,0	1/1:20,0:18:15.05:263,15,0	1/1:35,0:34:51.02:1222,51,0	0/1:20,0:17:99:291,0,226	0/0:8,0:5:1.25:0,1,3
chr10	32272808	.	CTCTCTCTGTGTGTG	C	6732.68	PASS	AB=1.000;AC=40;AF=0.769;AN=52;BaseQRankSum=1.400;DP=584;FS=7.204;HRun=0;HaplotypeScore=175.7241;InbreedingCoeff=0.2914;MQ=47.31;MQ0=43;MQRankSum=1.371;QD=13.66;ReadPosRankSum=0.906;VQSLOD=3.3071;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:28:6.02:86,6,0	1/1:9,0:9:6.57:185,7,0	./.	./.	0/1:25,0:24:0:0,0,0	1/1:17,0:13:3.01:35,3,0	1/1:25,0:22:10.86:132,11,0	1/1:19,0:16:22.95:441,23,0	1/1:24,0:22:2.59:20,3,0	1/1:4,24:27:50.33:1257,50,0	1/1:26,0:26:7.99:137,8,0	1/1:25,0:22:12.04:201,12,0	1/1:22,0:22:18.46:320,18,0	1/1:25,0:25:2.80:38,3,0	0/0:36,0:35:33.56:0,34,1648	1/1:21,0:20:9.03:201,9,0	1/1:36,0:31:19.78:388,20,0	0/1:15,0:13:99:358,0,99	0/1:17,0:13:99:215,0,262	1/1:13,0:13:3.01:72,3,0	0/0:21,0:15:17.25:0,17,220	1/1:6,19:25:3.88:20,4,0	1/1:17,0:17:1.19:57,1,0	0/0:6,20:24:0:0,0,0	1/1:20,0:18:15.05:387,15,0	1/1:9,26:34:71.14:1676,71,0	0/1:20,0:18:99:505,0,152	0/0:8,0:5:0.89:0,1,2
chr10	32272814	.	CTGTGTGTG	C	4940.89	PASS	AB=0.924;AC=32;AF=0.640;AN=50;BaseQRankSum=-0.401;DP=590;FS=10.142;HRun=0;HaplotypeScore=157.0929;InbreedingCoeff=0.3609;MQ=48.32;MQ0=41;MQRankSum=0.209;QD=12.35;ReadPosRankSum=-0.058;VQSLOD=3.0810;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:13,15:27:3.07:0,3,12	1/1:2,6:8:2.92:70,3,0	./.	./.	0/1:25,0:24:0:0,0,0	0/0:9,8:14:1.82:0,2,5	0/0:8,13:19:0.47:0,0,1	1/1:10,10:16:29.92:473,30,0	1/1:24,0:22:2.77:20,3,0	1/1:28,0:27:26.07:965,26,0	1/1:8,20:28:2.81:68,3,0	0/0:11,14:22:1.36:0,1,3	1/1:8,15:23:5.74:140,6,0	0/0:10,18:28:2.33:0,2,8	0/0:35,0:34:42.14:0,42,1134	1/1:8,16:23:6.02:141,6,0	1/1:23,16:34:2.23:14,2,0	0/1:16,0:13:32.91:225,0,33	0/1:12,6:14:3.64:290,0,4	1/1:2,11:13:3.01:72,3,0	1/1:17,0:13:7.41:195,7,0	1/1:24,0:24:3.82:55,4,0	0/1:16,0:17:0.25:0,0,0	0/0:27,0:25:0:0,0,0	1/1:21,0:19:18.06:465,18,0	1/1:32,1:34:48.10:1145,48,0	1/1:15,5:18:24.08:603,24,0	./.
chr10	32272834	.	GTGTGTGTA	G	2853.19	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=10.635;DP=590;FS=11.380;HRun=0;HaplotypeScore=156.3270;InbreedingCoeff=-0.1522;MQ=52.13;MQ0=32;MQRankSum=-0.602;QD=8.86;ReadPosRankSum=10.044;VQSLOD=0.3304;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:22:5.98:0,6,47	0/1:12,0:12:38.75:39,0,63	0/0:11,0:6:17.98:0,18,283	0/0:12,0:10:19.65:0,20,279	0/0:27,0:26:11.89:0,12,117	0/0:15,0:14:8.98:0,9,73	0/0:21,0:19:12.46:0,12,101	0/1:32,0:28:99:198,0,318	0/1:27,0:26:12.97:13,0,81	0/1:28,0:28:38.28:624,0,38	0/1:26,0:26:36.71:37,0,85	0/0:23,0:21:15.45:0,15,125	0/1:20,0:20:60.21:89,0,60	0/0:24,0:24:5.99:0,6,50	0/0:30,0:30:59.17:0,59,1443	0/1:22,0:22:59.94:90,0,60	0/0:29,0:26:8.74:0,9,46	0/1:17,0:13:60.25:105,0,60	0/1:17,0:13:99:173,0,126	0/1:15,0:15:38.86:39,0,72	0/1:15,0:11:31.77:86,0,32	1/1:20,3:23:3.82:64,4,0	0/0:16,0:16:2.51:0,3,25	0/0:28,0:26:8.97:0,9,70	0/1:21,0:19:0.93:294,0,1	0/1:32,0:32:14.41:741,0,14	1/1:15,0:13:24.08:421,24,0	0/0:6,2:5:2.99:0,3,24
chr10	32272978	.	T	TG	613.08	PASS	AC=36;AF=0.857;AN=42;BaseQRankSum=4.468;DP=103;FS=14.019;HRun=0;HaplotypeScore=18.2088;InbreedingCoeff=0.3552;MQ=75.35;MQ0=4;MQRankSum=-0.915;QD=16.13;ReadPosRankSum=-6.172;VQSLOD=1.1271;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:4:8.93:65,9,0	./.	0/0:13,0:12:0.48:0,0,328	0/0:14,0:11:30.07:0,30,379	1/1:0,1:1:2.99:24,3,0	1/1:2,0:2:5.99:50,6,0	1/1:1,0:1:2.99:24,3,0	1/1:4,0:4:9:80,9,0	1/1:2,0:2:5.99:48,6,0	./.	./.	1/1:3,0:3:5.98:47,6,0	./.	1/1:3,0:3:5.99:49,6,0	0/0:33,0:33:99:0,99,1331	1/1:0,2:2:2.98:21,3,0	1/1:2,0:2:5.98:46,6,0	1/1:2,0:2:2.97:20,3,0	1/1:1,1:1:2.97:20,3,0	1/1:1,0:1:2.99:23,3,0	./.	1/1:1,0:1:3:25,3,0	1/1:1,0:1:2.99:23,3,0	./.	1/1:3,0:3:8.99:76,9,0	1/1:1,0:1:3:28,3,0	1/1:3,0:3:8.90:66,9,0	./.
chr10	32274763	.	C	CAAA	5496.72	PASS	AB=0.680;AC=37;AF=0.661;AN=56;BaseQRankSum=-4.015;DP=549;FS=11.386;HRun=15;HaplotypeScore=110.0438;InbreedingCoeff=0.5831;MQ=79.94;MQ0=0;MQRankSum=-0.994;QD=13.88;ReadPosRankSum=-7.813;VQSLOD=-0.5367;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:9,11:24:7.16:199,0,7	1/1:2,0:7:14.98:141,15,0	0/1:23,0:19:5.19:5,0,57	0/0:18,0:17:0.57:0,1,14	1/1:10,13:29:61.10:709,61,0	1/1:17,0:18:6.71:182,7,0	1/1:3,9:18:10.26:127,10,0	0/0:9,0:34:67.39:0,67,378	1/1:6,12:18:22.60:306,23,0	1/1:11,10:30:48.06:637,48,0	0/1:8,5:18:2.55:258,0,3	1/1:7,6:14:10.49:94,10,0	1/1:9,2:24:35.63:378,36,0	1/1:9,9:20:11.98:129,12,0	0/0:22,0:22:32.20:0,32,323	1/1:7,1:20:21.36:218,21,0	0/1:5,1:17:10.69:159,0,11	1/1:4,6:14:21.78:237,22,0	0/0:5,0:16:26.61:0,27,154	0/0:4,0:18:28.89:0,29,171	0/0:3,0:11:21.85:0,22,125	1/1:4,10:16:15.80:440,16,0	1/1:4,11:17:14.98:237,15,0	0/1:4,5:19:14.57:108,0,15	1/1:4,9:17:12:139,12,0	1/1:3,10:20:51:575,51,0	0/0:9,0:34:67.02:0,67,395	1/1:2,3:10:17.98:218,18,0
chr10	32275098	.	T	TCGGA	6041.93	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=1.268;DP=510;FS=2.854;HRun=0;HaplotypeScore=113.3312;InbreedingCoeff=0.9894;MQ=81.07;MQ0=5;MQRankSum=-10.938;QD=62.29;ReadPosRankSum=-3.556;VQSLOD=5.8593;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:75.26:0,75,1450	0/0:4,0:4:12.04:0,12,240	0/0:28,0:22:57.89:0,58,1116	0/0:31,0:24:41.27:0,41,1112	0/0:16,0:16:45.15:0,45,910	0/0:15,0:15:42.14:0,42,839	0/0:29,0:29:72.21:0,72,1372	1/1:12,14:26:60.20:1603,60,0	0/0:17,0:17:48.16:0,48,959	0/0:13,0:13:36.12:0,36,706	0/0:8,0:8:24.07:0,24,446	0/0:18,0:18:51.18:0,51,1017	0/0:22,0:22:63.22:0,63,1236	0/0:16,0:16:48.16:0,48,959	0/0:16,0:16:45.15:0,45,899	0/0:21,0:21:54.19:0,54,1067	0/0:21,0:20:57.16:0,57,1099	0/0:12,0:12:30.10:0,30,599	1/1:11,6:17:45.12:1123,45,0	1/1:3,10:13:36.12:1001,36,0	1/1:6,15:20:35.70:989,36,0	0/0:7,0:7:21.07:0,21,413	0/0:17,0:17:45.14:0,45,856	0/0:31,0:31:87.30:0,87,1737	0/0:20,0:20:51.13:0,51,979	0/0:15,0:15:45.15:0,45,867	1/1:5,14:19:54.11:1327,54,0	0/0:6,0:6:18.06:0,18,369
chr10	32275109	.	TTGTG	T	2367.73	PASS	AB=0.853;AC=27;AF=0.540;AN=50;BaseQRankSum=-1.128;DP=548;FS=8.280;HRun=0;HaplotypeScore=121.4797;InbreedingCoeff=0.1033;MQ=63.67;MQ0=12;MQRankSum=3.762;QD=6.75;ReadPosRankSum=0.363;VQSLOD=1.7382;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:22,10:31:1.92:214,0,2	./.	./.	./.	0/1:17,0:17:5.41:88,0,5	0/1:14,6:19:34.78:35,0,43	1/1:19,7:28:7.07:185,7,0	0/0:31,0:28:35.71:0,36,346	0/1:13,6:19:3.13:41,0,3	0/1:14,0:15:10.45:52,0,10	1/1:8,0:9:9.01:98,9,0	0/1:15,2:17:36.89:37,0,37	0/1:11,5:17:19.92:149,0,20	0/1:15,4:19:18.84:124,0,19	0/0:17,0:17:36.11:0,36,779	1/1:10,11:22:21.06:307,21,0	1/1:14,12:25:15.04:214,15,0	1/1:10,0:11:8.51:71,9,0	0/0:29,0:29:20.98:0,21,245	0/0:20,0:19:4.37:0,4,45	0/0:32,0:30:2.45:0,2,37	1/1:7,5:12:6.02:84,6,0	0/1:11,4:15:18.08:40,0,18	1/1:22,6:29:13.15:408,13,0	0/1:18,0:19:4.25:156,0,4	1/1:11,6:17:14.83:191,15,0	0/0:22,0:21:26.85:0,27,382	0/1:5,0:4:34.93:37,0,35
chr10	32275178	.	AT	A	2528.80	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=8.468;DP=539;FS=21.546;HRun=6;HaplotypeScore=78.3430;InbreedingCoeff=0.9642;MQ=65.25;MQ0=2;MQRankSum=-3.526;QD=24.79;ReadPosRankSum=-2.312;VQSLOD=1.6132;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:84.20:0,84,1056	0/0:5,0:5:15.05:0,15,197	0/0:27,0:25:41.77:0,42,573	0/0:25,0:21:11.52:0,12,375	0/0:26,0:26:75.24:0,75,986	0/0:24,0:24:57.19:0,57,750	0/0:21,0:21:60.18:0,60,773	1/1:6,31:37:87.15:900,87,0	0/0:16,0:16:33.11:0,33,434	0/0:17,0:17:48.16:0,48,627	0/0:22,0:22:63.16:0,63,804	0/0:18,0:18:54.18:0,54,710	0/0:20,0:20:54.18:0,54,709	0/0:16,0:16:42.07:0,42,514	0/0:13,0:13:36.11:0,36,460	0/0:20,0:20:48.15:0,48,617	0/0:19,0:18:39.13:0,39,512	0/0:13,0:13:39.13:0,39,510	1/1:1,14:15:42.10:451,42,0	1/1:0,10:10:27.07:289,27,0	1/1:1,19:18:42.10:451,42,0	0/0:19,0:19:54.18:0,54,707	0/0:12,0:12:30.10:0,30,395	0/0:35,0:35:96.30:0,96,1247	0/0:13,0:13:33.09:0,33,418	0/0:24,0:24:72.22:0,72,927	1/1:0,20:20:57.14:612,57,0	0/0:2,0:2:6.02:0,6,79
chr10	32276757	.	TA	T	4116.82	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=16.399;DP=610;FS=5.092;HRun=5;HaplotypeScore=79.6114;InbreedingCoeff=0.9771;MQ=85.11;MQ0=0;MQRankSum=-3.131;QD=31.67;ReadPosRankSum=-2.936;VQSLOD=3.0092;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:54.18:0,54,739	0/0:10,0:10:30.10:0,30,410	0/0:19,0:19:37.27:0,37,421	0/0:21,0:21:6.35:0,6,322	0/0:27,0:26:75.24:0,75,1009	0/0:26,0:26:75.25:0,75,1023	0/0:24,0:24:60.19:0,60,806	1/1:1,35:36:99:1147,102,0	0/0:17,0:17:48.15:0,48,640	0/0:26,0:26:78.26:0,78,1067	0/0:21,0:21:54.17:0,54,724	0/0:17,0:17:51.16:0,51,678	0/0:28,0:28:75.23:0,75,993	0/0:22,0:22:63.21:0,63,854	0/0:22,0:22:63.21:0,63,862	0/0:20,0:20:60.20:0,60,821	0/0:23,0:23:69.21:0,69,927	0/0:19,0:19:54.18:0,54,739	1/1:0,19:19:57.15:636,57,0	1/1:0,30:30:81.19:904,81,0	1/1:0,20:20:54.15:613,54,0	0/0:13,0:13:36.12:0,36,492	0/0:21,1:22:29.15:0,29,755	0/0:14,0:14:42.14:0,42,575	0/0:27,0:27:78.26:0,78,1067	0/0:27,0:27:75.25:0,75,1026	1/1:1,24:25:72.21:817,72,0	0/0:16,0:16:48.16:0,48,656
chr10	32277225	.	A	ACCT	6600.75	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=16.088;DP=811;FS=0.796;HRun=0;HaplotypeScore=145.1018;InbreedingCoeff=0.9969;MQ=64.12;MQ0=0;MQRankSum=-16.227;QD=46.48;ReadPosRankSum=-1.843;VQSLOD=6.0941;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:61,0:61:99:0,172,2791	0/0:6,0:6:18.06:0,18,300	0/0:25,0:23:66.23:0,66,1080	0/0:15,0:15:41.88:0,42,651	0/0:29,0:29:84.29:0,84,1399	0/0:35,0:34:99:0,99,1615	0/0:36,0:36:99:0,99,1611	1/1:18,28:46:99:2327,114,0	0/0:31,0:31:87.30:0,87,1446	0/0:32,0:32:90.31:0,90,1494	0/0:17,0:17:48.16:0,48,792	0/0:24,0:24:69.20:0,69,1098	0/0:38,0:38:99:0,102,1668	0/0:34,0:34:93.30:0,93,1521	0/0:43,0:43:99:0,126,2040	0/0:31,0:31:93.30:0,93,1522	0/0:43,0:43:99:0,123,1983	0/0:28,0:28:84.29:0,84,1366	1/1:13,14:27:57.16:1223,57,0	1/1:8,15:23:45.15:970,45,0	1/1:11,9:20:27.09:602,27,0	0/0:21,0:21:57.19:0,57,937	0/0:16,0:16:45.15:0,45,742	0/0:36,0:36:96.33:0,96,1592	0/0:27,0:27:78.23:0,78,1244	0/0:34,0:34:99:0,102,1676	1/1:4,22:26:69.19:1479,69,0	0/0:7,0:7:21.07:0,21,340
chr10	32277272	.	ACACT	A	5711.79	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=16.060;DP=780;FS=5.931;HRun=0;HaplotypeScore=152.3390;InbreedingCoeff=0.9941;MQ=75.59;MQ0=0;MQRankSum=-12.578;QD=41.39;ReadPosRankSum=-2.414;VQSLOD=4.0079;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,126,3046	0/0:9,0:9:27.08:0,27,691	0/0:32,0:31:77.41:0,77,1999	0/0:21,0:21:63.16:0,63,1319	0/0:27,0:27:81.21:0,81,1939	0/0:31,0:31:90.14:0,90,2222	0/0:29,0:29:87.26:0,87,2256	1/1:11,21:32:93.19:1507,93,0	0/0:25,0:25:69.19:0,69,1672	0/0:35,0:35:99:0,105,2844	0/0:26,0:26:78.25:0,78,2056	0/0:32,0:32:93.31:0,93,2456	0/0:35,0:35:99:0,105,2779	0/0:38,0:38:99:0,114,2829	0/0:36,0:36:99:0,108,2662	0/0:27,0:27:80.70:0,81,1822	0/0:43,0:43:99:0,126,3308	0/0:23,0:24:69.09:0,69,1657	1/1:5,27:32:78.57:1313,79,0	1/1:5,27:32:72.25:1427,72,0	1/1:7,9:16:18.06:336,18,0	0/0:17,0:17:51.18:0,51,1389	0/0:11,0:11:33.08:0,33,774	0/0:41,0:41:99:0,123,3130	0/0:30,0:30:90.30:0,90,2386	0/0:24,0:24:69.19:0,69,1597	1/1:6,20:26:64.89:1128,65,0	0/0:6,0:6:15.05:0,15,419
chr10	32278627	.	AC	A	10607.82	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-0.713;DP=513;FS=15.963;HRun=9;HaplotypeScore=59.6906;InbreedingCoeff=0.9510;MQ=70.71;MQ0=1;MQRankSum=-2.479;QD=22.86;ReadPosRankSum=3.816;VQSLOD=4.1156;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,20:25:31.42:542,31,0	1/1:0,7:7:14.63:137,15,0	0/0:14,0:12:29.30:0,29,273	0/0:15,0:16:11.38:0,11,220	1/1:3,27:30:78.04:713,78,0	1/1:2,18:20:57.03:520,57,0	1/1:1,12:13:33.02:302,33,0	1/1:10,13:24:41.60:352,42,0	1/1:0,11:11:30.02:274,30,0	1/1:3,22:25:63.03:576,63,0	1/1:4,24:28:68.99:623,69,0	1/1:1,17:18:48.02:439,48,0	1/1:0,21:21:63.03:576,63,0	1/1:2,9:11:30.01:274,30,0	0/0:19,0:19:54.16:0,54,622	1/1:0,19:19:51.03:467,51,0	1/1:3,12:15:36.02:329,36,0	1/1:2,6:8:18.01:165,18,0	1/1:4,8:12:26.38:226,26,0	1/1:6,32:38:55.28:735,55,0	1/1:0,18:18:48.03:439,48,0	1/1:1,13:14:39.02:357,39,0	1/1:4,15:19:42.02:384,42,0	1/1:1,5:6:15.01:137,15,0	1/1:1,27:28:75.04:686,75,0	1/1:1,20:21:60:543,60,0	1/1:3,27:30:81.04:741,81,0	1/1:3,0:3:8.95:68,9,0
chr10	32280914	.	AT	A	11193.90	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=2.781;DP=480;FS=13.686;HRun=8;HaplotypeScore=55.0585;InbreedingCoeff=0.9101;MQ=75.75;MQ0=0;MQRankSum=-3.632;QD=25.15;ReadPosRankSum=1.799;VQSLOD=4.5865;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,21:24:66.10:636,66,0	1/1:0,2:2:3:29,3,0	0/0:10,0:10:21.06:0,21,236	0/0:9,0:9:8.17:0,8,97	1/1:2,23:25:69.06:657,69,0	1/1:1,20:21:54.09:521,54,0	1/1:0,8:8:21.03:203,21,0	1/1:2,27:29:78.12:753,78,0	1/1:0,9:9:27.04:260,27,0	1/1:2,17:19:51.06:485,51,0	1/1:4,17:21:51:480,51,0	1/1:3,10:13:30.04:290,30,0	1/1:2,19:21:54.08:521,54,0	1/1:1,19:20:54.09:521,54,0	0/0:16,0:16:48.15:0,48,580	1/1:1,15:16:39.06:377,39,0	1/1:5,18:23:54.08:521,54,0	1/1:2,12:14:19.50:328,20,0	1/1:2,16:18:48.08:464,48,0	1/1:0,22:22:63.04:597,63,0	1/1:2,20:22:54.08:521,54,0	1/1:1,12:13:35.98:335,36,0	1/1:2,12:14:36.06:347,36,0	1/1:2,19:21:57.09:550,57,0	1/1:1,14:15:39.06:377,39,0	1/1:0,15:15:45.07:435,45,0	1/1:4,24:28:72.11:695,72,0	1/1:0,12:12:30.05:290,30,0
chr10	32281288	.	AGT	A	10261.39	PASS	AB=0.933;AC=48;AF=0.857;AN=56;BaseQRankSum=-1.984;DP=484;FS=0.613;HRun=0;HaplotypeScore=72.3338;InbreedingCoeff=0.7391;MQ=73.58;MQ0=24;MQRankSum=-2.420;QD=26.31;ReadPosRankSum=5.385;VQSLOD=5.6003;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:37,0:35:75.20:981,75,0	1/1:6,0:6:11.74:132,12,0	0/0:37,0:23:45.88:0,46,674	0/0:47,0:23:50.97:0,51,740	1/1:15,0:14:29.66:376,30,0	1/1:12,3:15:30.75:366,31,0	1/1:19,0:19:26.05:516,26,0	1/1:3,16:18:45.14:592,45,0	1/1:11,2:13:29.80:358,30,0	1/1:18,0:18:48.10:597,48,0	1/1:9,1:10:18.05:230,18,0	0/1:8,0:6:1.79:113,0,2	1/1:17,4:21:51.07:634,51,0	1/1:8,0:8:20.95:226,21,0	0/0:10,0:9:24.08:0,24,392	1/1:9,2:9:24.07:307,24,0	1/1:24,0:23:53.06:606,53,0	1/1:13,0:13:18.27:314,18,0	1/1:0,9:9:24.08:317,24,0	1/1:10,1:10:29.99:378,30,0	1/1:42,0:42:60.15:776,60,0	1/1:13,0:11:28.15:291,28,0	0/1:11,2:13:19.26:206,0,19	1/1:25,1:26:34.02:546,34,0	1/1:7,0:7:21.07:271,21,0	1/1:1,13:14:39.13:518,39,0	1/1:8,4:12:33.10:420,33,0	1/1:6,0:6:17.05:189,17,0
chr10	32281292	.	T	TG	1126.69	PASS	AB=1.000;AC=36;AF=0.643;AN=56;BaseQRankSum=-1.360;DP=525;FS=7.226;HRun=1;HaplotypeScore=122.0097;InbreedingCoeff=0.0537;MQ=67.55;MQ0=27;MQRankSum=4.165;QD=2.66;ReadPosRankSum=5.248;VQSLOD=-0.3307;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:42,0:40:29.92:98,30,0	0/1:6,0:6:0.43:25,0,0	0/0:36,0:22:22.32:0,22,568	0/0:43,0:19:51.16:0,51,644	0/1:15,0:14:13.09:13,0,13	0/1:22,0:21:24.67:25,0,47	1/1:21,0:21:12.85:114,13,0	0/1:23,0:22:22.63:58,0,23	0/1:13,0:13:26.22:26,0,39	0/1:22,0:22:54.41:100,0,54	1/1:8,0:8:1.10:41,1,0	0/1:11,0:9:8.99:10,0,9	0/1:23,0:23:14.57:15,0,124	1/1:7,0:7:9.04:65,9,0	0/0:10,0:9:24.08:0,24,312	1/1:12,0:10:3.55:65,4,0	1/1:21,4:24:21.72:256,22,0	1/1:16,0:16:4.69:47,5,0	1/1:13,0:13:4.87:12,5,0	0/1:12,0:11:7.65:8,0,11	0/1:46,0:46:4.61:32,0,5	1/1:14,0:11:19.46:94,19,0	0/0:11,1:12:7.34:0,7,49	0/1:29,0:29:0.84:111,0,1	1/1:7,0:7:4.78:12,5,0	1/1:15,0:14:6.50:20,7,0	0/1:15,0:15:21.22:21,0,23	1/1:7,0:7:8.98:27,9,0
chr10	32281293	.	GTGGT	G	9457.22	PASS	AB=0.995;AC=36;AF=0.643;AN=56;BaseQRankSum=-7.715;DP=516;FS=5.697;HRun=0;HaplotypeScore=100.8173;InbreedingCoeff=-0.0803;MQ=66.65;MQ0=27;MQRankSum=-0.303;QD=22.10;ReadPosRankSum=4.039;VQSLOD=4.3112;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:44,0:42:22.95:794,0,23	0/1:5,0:5:11.88:118,0,12	0/0:35,0:21:46.33:0,46,674	0/0:42,0:18:50.97:0,51,740	0/1:14,0:13:41.70:307,0,42	0/1:22,0:21:99:249,0,136	0/1:20,0:20:48.96:487,0,49	1/1:23,0:22:45.61:593,46,0	0/1:12,0:12:37.82:276,0,38	1/1:20,1:21:10.13:617,10,0	1/1:8,0:8:18.05:230,18,0	0/1:11,0:9:97.97:98,0,125	0/1:22,0:22:47.05:499,0,47	1/1:5,2:7:21.02:258,21,0	0/0:11,0:10:27.09:0,27,458	1/1:11,0:9:19.14:275,19,0	0/1:25,0:24:19.21:455,0,19	0/1:15,0:15:89.34:277,0,89	1/1:13,0:13:24.55:318,25,0	1/1:12,0:11:29.99:397,30,0	1/1:43,0:43:69.17:871,69,0	0/1:14,0:11:17:213,0,17	0/1:11,1:12:93.88:173,0,94	0/1:29,0:29:99:463,0,104	1/1:7,1:8:24.08:335,24,0	1/1:15,0:14:18.47:456,18,0	1/1:14,1:15:39.12:554,39,0	0/1:7,0:7:5.67:146,0,6
chr10	32281368	.	G	GTT	2314.13	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-6.033;DP=520;FS=14.437;HRun=4;HaplotypeScore=170.9883;InbreedingCoeff=0.9489;MQ=79.10;MQ0=0;MQRankSum=-4.542;QD=26.91;ReadPosRankSum=-3.848;VQSLOD=0.8618;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:56.37:0,56,219	0/0:2,0:2:4.74:0,5,16	0/0:31,0:30:78.15:0,78,974	0/0:36,0:31:80.59:0,81,988	0/0:16,0:16:34.86:0,35,113	0/0:26,0:26:24.32:0,24,128	0/0:21,0:21:43.90:0,44,142	1/1:9,16:25:36.85:777,37,0	0/0:16,0:16:36.10:0,36,125	0/0:19,0:19:41.05:0,41,133	0/0:15,0:15:31.41:0,31,100	0/0:15,0:15:32.71:0,33,107	0/0:27,0:27:48.63:0,49,159	0/0:18,0:18:39.80:0,40,131	0/0:22,0:22:66.22:0,66,878	0/0:16,0:16:33.20:0,33,109	0/0:29,0:29:40.31:0,40,171	0/0:14,0:14:26.59:0,27,93	1/1:2,7:9:14.95:199,15,0	1/1:0,13:14:29.96:390,30,0	1/1:6,10:16:9.04:274,9,0	0/0:11,0:11:21.19:0,21,70	0/0:9,0:9:21.34:0,21,70	0/0:12,0:12:21.34:0,21,70	0/0:14,0:14:28.01:0,28,93	0/0:17,0:17:37.81:0,38,128	1/1:8,13:21:58.18:844,58,0	0/0:11,0:11:23.65:0,24,78
chr10	32281372	.	TA	T	13754.17	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=10.445;DP=526;FS=9.661;HRun=1;HaplotypeScore=121.4472;InbreedingCoeff=0.9559;MQ=82.85;MQ0=0;MQRankSum=-9.022;QD=31.26;ReadPosRankSum=4.557;VQSLOD=3.5943;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,38:38:96.27:1317,96,0	1/1:0,3:3:6.02:84,6,0	0/0:29,0:29:83.70:0,84,1145	0/0:34,0:32:83.53:0,84,1143	1/1:0,17:17:51.09:666,51,0	1/1:1,24:25:63.20:864,63,0	1/1:0,23:23:57.19:796,57,0	1/1:25,0:25:42.47:334,42,0	1/1:1,14:15:45.14:613,45,0	1/1:1,18:19:57.10:756,57,0	1/1:0,16:16:42.14:586,42,0	1/1:0,16:16:42.14:586,42,0	1/1:0,26:26:63.21:880,63,0	1/1:0,18:18:51.17:709,51,0	0/0:23,0:23:69.20:0,69,971	1/1:0,17:17:42.14:587,42,0	1/1:0,29:29:75.21:1019,75,0	1/1:0,14:14:33.11:453,33,0	1/1:10,0:10:16.12:108,16,0	1/1:15,0:15:27.78:169,28,0	1/1:16,0:16:18.99:130,19,0	1/1:0,11:11:30.05:396,30,0	1/1:0,10:10:27.09:377,27,0	1/1:0,13:13:27.09:377,27,0	1/1:0,14:14:36.12:500,36,0	1/1:0,17:17:48.16:664,48,0	1/1:22,0:21:55.35:338,55,0	1/1:1,10:11:33.10:444,33,0
chr10	32283676	.	TATCCTTCC	T	36895.69	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=13.059;DP=659;FS=0.902;HRun=0;HaplotypeScore=213.4163;InbreedingCoeff=0.9567;MQ=78.90;MQ0=0;MQRankSum=-14.085;QD=64.50;ReadPosRankSum=3.051;VQSLOD=4.9700;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,27:34:63.17:1707,63,0	1/1:0,14:14:39.09:1053,39,0	0/0:31,0:31:87.30:0,87,3685	0/0:19,0:20:57.16:0,57,2154	1/1:2,31:33:78.65:1884,79,0	1/1:3,23:26:54.18:1500,54,0	1/1:2,12:14:36.12:1033,36,0	1/1:9,21:30:63.22:1683,63,0	1/1:2,12:14:33.11:947,33,0	1/1:4,27:31:81.25:2135,81,0	1/1:5,25:30:69.15:1797,69,0	1/1:0,19:19:51.18:1463,51,0	1/1:1,24:25:66.18:1827,66,0	1/1:2,23:25:57.20:1635,57,0	0/0:36,0:36:99:0,108,4539	1/1:0,24:24:63.18:1742,63,0	1/1:1,22:23:54.19:1515,54,0	1/1:0,5:5:15.05:430,15,0	1/1:2,13:15:39.13:1072,39,0	1/1:3,37:40:99:2800,105,0	1/1:4,11:15:21.03:468,21,0	1/1:2,17:19:48.16:1326,48,0	1/1:1,25:26:60.16:1642,60,0	1/1:4,15:19:30.10:861,30,0	1/1:4,27:29:69.19:1913,69,0	1/1:0,28:28:84.24:2225,84,0	1/1:4,26:30:72.25:2066,72,0	1/1:0,2:2:6.02:172,6,0
chr10	32284029	.	A	AT	13168.30	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-16.439;DP=687;FS=3.251;HRun=8;HaplotypeScore=80.9295;InbreedingCoeff=0.9889;MQ=78.19;MQ0=0;MQRankSum=-1.715;QD=27.66;ReadPosRankSum=3.857;VQSLOD=5.3627;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,20:21:48.14:554,48,0	1/1:1,9:11:26.91:291,27,0	0/0:23,0:23:37.96:0,38,303	0/0:12,0:12:23.29:0,23,251	1/1:2,38:40:99:1083,99,0	1/1:0,17:17:48.14:554,48,0	1/1:3,29:32:54.65:779,55,0	0/0:35,0:35:90:0,90,813	1/1:1,10:11:30.09:346,30,0	1/1:7,30:37:90.20:997,90,0	1/1:3,24:27:66.20:761,66,0	1/1:2,21:23:42.12:485,42,0	1/1:2,29:31:72.21:831,72,0	1/1:3,21:24:57.17:658,57,0	0/0:28,0:28:81.04:0,81,741	1/1:1,31:32:84.23:969,84,0	1/1:0,18:18:48.14:554,48,0	1/1:0,10:10:21.06:242,21,0	0/0:20,0:20:50.95:0,51,453	0/0:44,0:44:99:0,120,1081	0/0:22,0:22:60.03:0,60,549	1/1:2,26:28:72.13:800,72,0	1/1:1,24:25:63.01:712,63,0	1/1:0,20:20:54.16:623,54,0	1/1:4,26:30:63.05:693,63,0	1/1:2,34:36:99:1131,99,0	0/0:26,0:26:75.04:0,75,686	1/1:0,3:3:9.03:104,9,0
chr10	32286525	.	A	AACACAC	6665.21	PASS	AB=0.701;AC=42;AF=0.778;AN=54;BaseQRankSum=-3.219;DP=606;FS=0.829;HRun=0;HaplotypeScore=149.3991;InbreedingCoeff=0.4019;MQ=59.99;MQ0=19;MQRankSum=-2.836;QD=13.52;ReadPosRankSum=-0.758;VQSLOD=4.2445;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,7:17:2.94:41,3,0	1/1:5,7:12:3.01:53,3,0	0/0:37,0:18:21.06:0,21,410	0/0:42,0:25:28.55:0,29,490	0/1:8,18:25:0:0,0,0	1/1:10,11:22:3.88:56,4,0	0/1:4,14:17:0:0,0,0	1/1:22,13:36:42.56:1101,43,0	1/1:2,9:12:2.55:87,3,0	1/1:6,11:17:36.12:909,36,0	1/1:6,15:21:8.92:254,9,0	0/1:6,19:24:0:0,0,0	1/1:10,12:24:15.52:352,16,0	1/1:4,15:21:6.02:175,6,0	0/0:17,0:16:33.58:0,34,698	1/1:9,18:27:9.03:268,9,0	1/1:16,0:16:10.28:228,10,0	1/1:6,1:7:6.02:195,6,0	1/1:9,5:14:20.66:458,21,0	1/1:12,14:26:3.01:89,3,0	0/1:9,1:10:30.90:246,0,31	1/1:1,13:14:4.12:132,4,0	0/1:7,18:26:0:0,0,0	./.	1/1:10,16:26:1.66:50,2,0	1/1:14,19:35:60.99:1594,61,0	1/1:9,20:30:12.51:284,13,0	0/1:6,0:6:92.06:92,0,103
chr10	32286540	.	TGA	T	391.11	PASS	AB=0.976;AC=26;AF=0.542;AN=48;BaseQRankSum=1.992;DP=501;FS=6.395;HRun=0;HaplotypeScore=131.3082;InbreedingCoeff=0.3230;MQ=57.79;MQ0=21;MQRankSum=-0.723;QD=1.39;ReadPosRankSum=0.192;VQSLOD=1.9526;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:0:0,0,0	1/1:8,2:10:6.01:59,6,0	./.	./.	0/1:19,0:20:0.01:0,0,0	1/1:15,1:17:2.94:21,3,0	0/1:17,0:15:18.24:18,0,30	0/0:22,0:22:0.89:0,1,2	0/0:18,1:18:0:0,0,0	1/1:12,1:13:6.01:58,6,0	1/1:17,1:18:2.87:15,3,0	0/0:24,0:23:3:0,3,26	1/1:19,0:19:8.68:53,9,0	1/1:19,1:20:6.66:39,7,0	0/0:17,1:17:6:0,6,68	1/1:24,0:24:4.46:21,4,0	1/1:14,2:14:17.48:137,17,0	0/0:7,0:6:2.98:0,3,22	0/0:9,0:9:6.01:0,6,61	1/1:16,1:17:0.30:1,0,0	0/0:13,0:13:5.91:0,6,49	0/0:15,0:14:0:0,0,0	0/1:18,1:19:0.01:0,0,0	./.	1/1:16,0:17:2.76:13,3,0	1/1:27,0:27:3.12:39,3,0	0/1:27,0:26:34.09:40,0,34	./.
chr10	32286544	.	A	ACT	1056.02	PASS	AB=0.972;AC=21;AF=0.375;AN=56;BaseQRankSum=6.074;DP=513;FS=10.156;HRun=0;HaplotypeScore=136.2721;InbreedingCoeff=-0.2520;MQ=54.79;MQ0=20;MQRankSum=-0.071;QD=3.30;ReadPosRankSum=3.185;VQSLOD=2.1718;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:2.84:0,3,14	0/0:10,0:10:5.99:0,6,52	0/0:22,0:6:2.94:0,3,129	0/0:30,0:14:22.01:0,22,241	0/1:20,0:20:0.15:0,0,0	0/0:21,0:21:4.75:0,5,27	0/0:18,0:16:5.81:0,6,83	0/1:26,0:26:99:107,0,257	1/1:21,0:20:2.46:33,2,0	0/1:13,0:13:98.10:118,0,98	0/1:19,0:19:7.98:92,0,8	0/0:25,0:25:5.94:0,6,42	0/1:19,1:20:87.61:117,0,88	0/1:19,0:19:22.35:61,0,22	0/0:16,0:15:32.94:0,33,481	0/1:22,3:24:45.47:117,0,45	0/1:10,6:14:24.77:25,0,88	0/1:7,0:6:41.73:42,0,73	0/1:12,0:12:44.08:44,0,237	1/1:18,0:18:2.96:36,3,0	0/1:13,0:13:45.11:45,0,85	0/1:14,0:13:4.34:28,0,4	0/0:18,0:18:0:0,0,0	0/0:15,0:14:0:0,0,0	1/1:18,0:18:2.96:27,3,0	0/1:28,0:28:99:234,0,144	0/1:27,0:27:53.32:53,0,132	0/1:4,0:4:19.12:19,0,81
chr10	32287556	.	T	TG	21578.74	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=2.895;DP=616;FS=6.898;HRun=2;HaplotypeScore=90.7453;InbreedingCoeff=0.9443;MQ=80.05;MQ0=0;MQRankSum=-7.754;QD=38.95;ReadPosRankSum=4.139;VQSLOD=4.9543;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,18:19:54.18:777,54,0	1/1:0,15:15:42.14:605,42,0	0/0:19,0:19:51.04:0,51,595	0/0:19,0:19:48.14:0,48,573	1/1:1,23:24:66.22:950,66,0	1/1:1,26:27:75.25:1080,75,0	1/1:1,14:15:39.13:562,39,0	1/1:3,30:33:90.29:1277,90,0	1/1:0,22:22:60.20:864,60,0	1/1:0,31:31:93.29:1317,93,0	1/1:2,23:25:69.23:980,69,0	1/1:0,26:26:75.25:1080,75,0	1/1:3,33:36:93.05:1335,93,0	1/1:1,25:26:72.24:1021,72,0	0/0:24,0:24:66.21:0,66,818	1/1:0,24:24:66.22:951,66,0	1/1:1,21:22:57.19:821,57,0	1/1:1,3:4:9.03:130,9,0	1/1:1,11:12:33.11:475,33,0	1/1:3,24:27:69.23:994,69,0	1/1:3,18:21:54.18:778,54,0	1/1:3,24:27:66.21:933,66,0	1/1:3,20:23:60.20:856,60,0	1/1:2,27:29:81.27:1166,81,0	1/1:1,13:14:39.13:561,39,0	1/1:0,27:27:78.26:1122,78,0	1/1:2,19:21:60.20:859,60,0	1/1:1,3:4:6.02:86,6,0
chr10	32288939	.	ACGCACACACACACG	A	9239.26	PASS	AB=1.000;AC=50;AF=0.893;AN=56;BaseQRankSum=-3.308;DP=446;FS=4.913;HRun=0;HaplotypeScore=141.1462;InbreedingCoeff=0.3223;MQ=51.47;MQ0=18;MQRankSum=2.749;QD=21.69;ReadPosRankSum=-2.770;VQSLOD=2.6258;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:26,1:27:36.91:719,37,0	0/1:2,0:2:0:0,0,0	0/1:22,0:4:3.96:17,0,4	0/1:31,0:16:50.20:50,0,155	1/1:15,2:17:23.55:450,24,0	1/1:16,0:16:35.40:471,35,0	1/1:19,0:19:41.77:481,42,0	1/1:20,0:19:54.12:617,54,0	1/1:1,16:18:7.13:93,7,0	1/1:11,0:10:30.08:388,30,0	1/1:7,1:7:9.90:223,10,0	1/1:13,0:12:36.07:486,36,0	1/1:0,18:18:3.01:130,3,0	1/1:16,0:16:27.05:331,27,0	0/0:20,0:20:39.09:0,39,1520	1/1:1,17:18:9.03:334,9,0	1/1:29,0:31:48.06:778,48,0	0/1:9,0:9:8.57:238,0,9	1/1:1,5:6:14.86:244,15,0	1/1:12,0:12:23.65:311,24,0	1/1:25,0:25:42.57:599,43,0	1/1:8,0:7:9.49:164,9,0	1/1:9,0:9:20.42:276,20,0	1/1:22,1:21:44.69:595,45,0	1/1:15,0:14:23.11:289,23,0	1/1:11,0:11:33.01:470,33,0	1/1:7,0:7:14.68:220,15,0	1/1:10,0:9:6.60:265,7,0
chr10	32288943	.	ACACACACACG	A	4929.94	PASS	AB=1.000;AC=50;AF=0.893;AN=56;BaseQRankSum=0.745;DP=467;FS=0.000;HRun=0;HaplotypeScore=137.4691;InbreedingCoeff=0.3969;MQ=50.44;MQ0=20;MQRankSum=1.380;QD=10.98;ReadPosRankSum=-2.965;VQSLOD=3.0191;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:27,1:27:44.67:356,45,0	1/1:3,0:3:0.89:2,1,0	0/1:21,0:3:0:0,0,0	0/1:30,0:13:7.14:8,0,7	1/1:17,1:17:18.28:211,18,0	1/1:17,0:17:29.56:240,30,0	1/1:20,1:19:27.31:206,27,0	1/1:24,0:23:30.09:203,30,0	1/1:17,1:18:5.81:87,6,0	1/1:14,0:13:27.46:203,27,0	1/1:8,0:7:9.84:117,10,0	1/1:14,0:13:26.92:216,27,0	1/1:18,0:18:2.79:73,3,0	1/1:17,0:17:18.56:150,19,0	0/0:18,0:18:12.03:0,12,925	1/1:18,1:18:9.03:221,9,0	1/1:32,0:31:60.49:500,60,0	0/1:10,0:10:2.29:86,0,2	1/1:5,0:5:14.98:168,15,0	1/1:14,0:14:21.83:181,22,0	1/1:25,0:24:39.41:336,39,0	1/1:8,0:7:6.45:78,6,0	1/1:9,0:9:17.95:143,18,0	1/1:23,0:22:38.94:313,39,0	1/1:16,0:15:32.98:315,33,0	1/1:16,0:15:30.64:263,31,0	1/1:11,0:11:14.73:112,15,0	0/1:10,0:9:0.51:143,0,1
chr10	32288953	.	G	GCA	349.25	PASS	AB=0.881;AC=29;AF=0.537;AN=54;BaseQRankSum=-2.729;DP=441;FS=0.000;HRun=0;HaplotypeScore=104.2059;InbreedingCoeff=0.2258;MQ=49.61;MQ0=17;MQRankSum=0.669;QD=1.40;ReadPosRankSum=-2.082;VQSLOD=1.7496;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:28:19.59:20,0,25	1/1:4,0:4:3.45:26,3,0	1/1:10,0:1:2.92:17,3,0	./.	0/0:17,0:16:0.14:0,0,0	1/1:16,0:16:2.99:25,3,0	1/1:18,0:16:2.95:25,3,0	1/1:23,0:22:6.26:54,6,0	0/0:19,0:19:1.25:0,1,3	1/1:15,0:14:1.30:5,1,0	0/0:8,0:8:3.87:0,4,9	1/1:12,0:11:2.99:24,3,0	0/0:18,0:18:2.44:0,2,11	1/1:14,0:14:3.47:26,3,0	0/1:7,9:18:64.03:120,0,64	0/0:19,0:18:6.45:0,6,22	1/1:31,0:30:1.82:17,2,0	1/1:8,0:8:4.52:24,5,0	0/1:5,0:5:3.20:19,0,3	0/0:14,0:14:0.69:0,1,2	0/0:27,0:26:0.51:0,1,19	0/0:7,0:6:2.45:0,2,10	0/0:9,0:9:1.27:0,1,3	1/1:25,0:24:1.59:4,2,0	0/0:16,0:15:0.64:0,1,2	0/0:18,0:17:2.56:0,3,12	1/1:11,0:11:7.11:44,7,0	1/1:10,0:9:5.02:28,5,0
chr10	32289092	.	G	GT	6534.19	PASS	AB=1.000;AC=42;AF=0.750;AN=56;BaseQRankSum=-9.376;DP=438;FS=2.573;HRun=10;HaplotypeScore=46.4233;InbreedingCoeff=0.7324;MQ=83.11;MQ0=2;MQRankSum=-1.326;QD=19.74;ReadPosRankSum=3.987;VQSLOD=5.5360;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,19:22:57.14:606,57,0	1/1:0,9:10:23.12:282,23,0	0/1:28,0:19:23.27:23,0,79	0/1:25,0:19:13.01:13,0,149	1/1:7,20:27:38.51:615,39,0	1/1:3,12:15:8.44:295,8,0	1/1:0,4:4:6.02:64,6,0	0/0:32,0:32:80.88:0,81,663	1/1:3,8:11:24.06:256,24,0	1/1:3,14:17:42.05:422,42,0	1/1:2,22:24:63.16:672,63,0	1/1:0,13:13:29.97:320,30,0	1/1:2,14:16:42.11:448,42,0	1/1:2,11:13:30.07:317,30,0	0/0:15,0:15:35.94:0,36,295	1/1:2,7:9:15.04:160,15,0	1/1:2,9:11:3.81:204,4,0	1/1:2,7:9:15.04:160,15,0	0/0:16,0:16:26.96:0,27,222	0/0:25,1:26:39.92:0,40,534	0/0:2,0:3:7.99:0,8,49	1/1:1,7:8:20.97:209,21,0	1/1:2,4:6:12.03:128,12,0	1/1:0,4:4:12.03:128,12,0	1/1:5,15:20:39.10:416,39,0	1/1:2,14:16:42.11:447,42,0	0/0:15,0:15:44.91:0,45,363	1/1:11,12:23:33.08:352,33,0
chr10	32293910	.	G	GT	13579.21	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-8.662;DP=660;FS=0.547;HRun=9;HaplotypeScore=63.7841;InbreedingCoeff=0.9526;MQ=74.24;MQ0=1;MQRankSum=-1.148;QD=23.13;ReadPosRankSum=2.127;VQSLOD=5.7418;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,28:29:72.19:796,72,0	1/1:1,11:12:27.07:299,27,0	0/0:24,0:18:14.22:0,14,119	0/0:18,0:12:12.09:0,12,120	1/1:5,27:32:78.58:834,79,0	1/1:1,21:22:60.16:664,60,0	1/1:9,12:21:24.97:467,25,0	1/1:7,16:23:45.07:469,45,0	1/1:5,17:22:16.06:405,16,0	1/1:5,32:37:99:1061,99,0	1/1:5,17:22:47.87:470,48,0	1/1:6,22:28:59.53:638,60,0	1/1:6,19:25:42.11:464,42,0	1/1:3,25:29:60.16:663,60,0	0/0:31,0:31:80.92:0,81,690	1/1:3,23:26:63.17:696,63,0	1/1:3,14:17:10.04:339,10,0	1/1:0,12:12:30.08:332,30,0	1/1:7,17:25:30.93:552,31,0	1/1:8,30:38:46.80:877,47,0	1/1:5,13:18:30.08:332,30,0	1/1:4,14:18:23.62:384,24,0	1/1:1,19:20:45.12:498,45,0	1/1:4,8:12:24.06:265,24,0	1/1:6,20:26:31.10:571,31,0	1/1:6,26:33:64.22:839,64,0	1/1:6,23:29:45.12:498,45,0	1/1:4,7:11:15.04:166,15,0
chr10	32297748	.	ATGTG	A	4640.22	PASS	AB=0.761;AC=41;AF=0.788;AN=52;BaseQRankSum=1.153;DP=698;FS=0.000;HRun=0;HaplotypeScore=121.8671;InbreedingCoeff=-0.0914;MQ=64.81;MQ0=21;MQRankSum=-0.686;QD=7.89;ReadPosRankSum=2.984;VQSLOD=3.5505;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:34,4:36:25.31:334,25,0	1/1:7,0:7:3.01:45,3,0	./.	./.	0/1:24,2:27:14.22:308,0,14	1/1:14,14:28:2.94:132,3,0	1/1:16,1:18:23.53:256,24,0	0/1:23,0:22:6.37:19,0,6	1/1:13,0:25:11.82:111,12,0	1/1:8,4:11:14.41:192,14,0	1/1:16,8:24:8.92:110,9,0	1/1:10,12:22:18.05:263,18,0	1/1:12,8:22:15.04:197,15,0	0/1:17,12:29:11:212,0,11	0/0:34,0:36:3.37:0,3,856	1/1:24,1:26:7.72:360,8,0	0/1:12,15:26:38.60:79,0,39	0/1:17,7:21:27.22:122,0,27	1/1:19,6:25:22.54:262,23,0	1/1:19,0:18:21.83:234,22,0	1/1:24,12:34:15.17:170,15,0	0/1:3,6:10:0.99:43,0,1	0/1:12,6:20:10.31:159,0,10	1/1:23,15:39:21.07:329,21,0	1/1:13,19:37:15.82:292,16,0	0/1:15,0:15:0.13:121,0,0	0/1:11,9:24:4.52:243,0,5	1/1:4,1:5:3.01:47,3,0
chr10	32298743	.	G	GAA	20303.12	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-8.049;DP=664;FS=14.540;HRun=9;HaplotypeScore=72.2532;InbreedingCoeff=0.9960;MQ=77.95;MQ0=3;MQRankSum=-5.733;QD=33.73;ReadPosRankSum=2.326;VQSLOD=3.8089;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,30:30:72.67:1073,73,0	1/1:1,6:7:18.06:277,18,0	0/0:19,0:19:30.01:0,30,306	0/0:24,0:23:42.07:0,42,441	1/1:3,31:36:89.15:1224,89,0	1/1:2,21:24:57.19:860,57,0	1/1:5,19:25:45.15:675,45,0	1/1:5,22:29:68.86:995,69,0	1/1:3,24:29:33.78:900,34,0	1/1:4,19:25:62.68:909,63,0	1/1:3,19:23:56.63:798,57,0	1/1:3,20:25:56.68:840,57,0	1/1:2,15:17:45.15:681,45,0	1/1:8,22:31:68.67:978,69,0	0/0:19,0:19:51.11:0,51,543	1/1:0,21:22:53.66:776,54,0	1/1:2,22:26:62.70:932,63,0	1/1:2,10:12:30.10:462,30,0	1/1:3,20:27:71.19:974,71,0	1/1:7,28:36:86.66:1216,87,0	1/1:5,10:18:26.06:340,26,0	1/1:5,18:24:56.63:799,57,0	1/1:4,13:20:35.60:500,36,0	1/1:1,24:29:80.23:1134,80,0	1/1:3,25:30:75.24:1118,75,0	1/1:1,18:20:51.17:781,51,0	1/1:4,16:21:38.62:555,39,0	1/1:1,11:12:33.11:508,33,0
chr10	32299134	.	A	AT	4506.47	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=3.410;DP=662;FS=0.000;HRun=3;HaplotypeScore=161.5151;InbreedingCoeff=0.9029;MQ=74.62;MQ0=0;MQRankSum=0.214;QD=7.35;ReadPosRankSum=1.607;VQSLOD=1.7830;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:28,1:29:51.33:222,51,0	1/1:13,0:13:24.06:92,24,0	0/0:20,0:19:20.63:0,21,326	0/0:7,1:8:7.80:0,8,34	1/1:37,0:37:65.04:294,65,0	1/1:28,0:27:43.12:150,43,0	1/1:18,0:18:32.02:133,32,0	1/1:29,0:29:61.85:307,62,0	1/1:19,0:19:31.65:107,32,0	1/1:34,0:35:66.89:315,67,0	1/1:24,0:24:42.49:157,42,0	1/1:24,0:24:44.17:148,44,0	1/1:30,0:30:56.76:237,57,0	1/1:30,0:30:44.63:149,45,0	0/0:21,0:21:44.80:0,45,496	1/1:22,0:22:35.96:175,36,0	1/1:15,0:15:20.27:102,20,0	1/1:8,0:8:9.87:41,10,0	1/1:25,1:26:43.96:228,44,0	1/1:32,0:32:54.77:240,55,0	1/1:15,0:15:28.57:124,29,0	1/1:18,0:18:23.84:167,24,0	1/1:34,0:34:59.39:256,59,0	1/1:21,0:21:31.34:109,31,0	1/1:35,0:35:62.30:267,62,0	1/1:33,0:33:58.19:225,58,0	1/1:34,1:35:52.46:255,52,0	1/1:3,0:3:3.37:8,3,0
chr10	32301037	.	C	CA	17416.57	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-9.927;DP=613;FS=12.663;HRun=5;HaplotypeScore=59.1037;InbreedingCoeff=0.9505;MQ=76.24;MQ0=1;MQRankSum=-5.499;QD=32.92;ReadPosRankSum=4.259;VQSLOD=4.4286;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,35:35:78.25:1026,78,0	1/1:1,4:5:9.03:118,9,0	0/0:24,0:23:54.08:0,54,566	0/0:23,0:22:54.11:0,54,559	1/1:1,13:14:30.10:395,30,0	1/1:2,18:20:51.12:649,51,0	1/1:3,22:25:37.46:836,37,0	1/1:2,37:39:99:1444,111,0	1/1:3,21:24:63.20:828,63,0	1/1:3,16:19:49.40:634,49,0	1/1:1,7:8:21.07:276,21,0	1/1:0,22:22:57.19:750,57,0	1/1:2,31:33:84.27:1105,84,0	1/1:3,21:24:63.20:823,63,0	0/0:37,0:37:93.23:0,93,999	1/1:0,25:25:66.21:869,66,0	1/1:2,31:33:87.28:1145,87,0	1/1:2,25:27:9.86:806,10,0	1/1:1,18:19:54.15:677,54,0	1/1:2,12:14:30.01:356,30,0	1/1:6,17:23:51.17:671,51,0	1/1:4,14:18:54.11:663,54,0	1/1:0,8:8:18.06:237,18,0	1/1:1,16:17:45.15:592,45,0	1/1:0,8:8:18.06:237,18,0	1/1:4,22:26:60.12:739,60,0	1/1:1,36:37:99:1342,102,0	1/1:0,6:6:15.05:197,15,0
chr10	32301443	.	AGG	A	1422.51	PASS	AC=40;AF=0.870;AN=46;BaseQRankSum=5.982;DP=123;FS=35.107;HRun=4;HaplotypeScore=69.0524;InbreedingCoeff=0.5479;MQ=88.36;MQ0=0;MQRankSum=-6.691;QD=14.97;ReadPosRankSum=2.343;VQSLOD=-0.6981;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,2:4:6.01:59,6,0	1/1:0,2:2:6.01:61,6,0	0/0:8,0:7:18.05:0,18,268	0/0:12,0:11:25.09:0,25,448	1/1:1,7:8:3.48:31,3,0	1/1:0,5:4:12.02:115,12,0	1/1:3,8:11:24.04:238,24,0	1/1:2,5:6:12.03:128,12,0	./.	1/1:1,2:3:6.01:62,6,0	1/1:0,5:5:2.88:15,3,0	1/1:1,3:4:9:81,9,0	1/1:2,1:4:5.84:42,6,0	1/1:1,3:4:11.92:106,12,0	0/0:6,0:6:18.06:0,18,337	1/1:1,2:3:6.01:62,6,0	1/1:0,3:3:9.02:94,9,0	./.	1/1:2,1:3:3:29,3,0	1/1:1,6:7:9.47:86,9,0	./.	1/1:2,3:5:5.88:44,6,0	1/1:1,2:2:6.01:58,6,0	1/1:2,2:4:6.01:57,6,0	./.	1/1:0,2:2:6.01:63,6,0	1/1:2,6:8:14.51:127,15,0	./.
chr10	32301448	.	TGTGG	T	1499.91	PASS	AC=40;AF=0.870;AN=46;BaseQRankSum=6.283;DP=101;FS=35.783;HRun=0;HaplotypeScore=68.7194;InbreedingCoeff=0.5571;MQ=99.54;MQ0=0;MQRankSum=-6.973;QD=20.83;ReadPosRankSum=2.743;VQSLOD=1.7024;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,2:2:6.01:62,6,0	1/1:0,2:2:6.01:61,6,0	0/0:10,0:9:22.59:0,23,530	0/0:11,0:10:26.51:0,27,678	1/1:0,7:7:5.50:40,6,0	1/1:0,5:4:12.03:123,12,0	1/1:0,8:8:24.05:246,24,0	1/1:0,5:4:12.03:135,12,0	./.	1/1:0,2:2:6.01:65,6,0	1/1:0,5:5:2.94:18,3,0	1/1:0,3:3:9.01:86,9,0	1/1:1,1:2:6.01:58,6,0	1/1:1,3:4:9.02:89,9,0	0/0:6,0:6:18.06:0,18,521	1/1:0,2:2:6.01:64,6,0	1/1:0,3:3:9.02:98,9,0	./.	1/1:0,1:1:3.01:32,3,0	1/1:0,6:6:11.51:100,12,0	./.	1/1:0,3:3:5.93:47,6,0	1/1:0,2:2:6.01:60,6,0	1/1:0,2:2:6.01:59,6,0	./.	1/1:0,2:2:6.02:65,6,0	1/1:0,6:6:14.25:131,14,0	./.
chr10	32301453	.	AACCCTGG	A	3782.48	PASS	AC=40;AF=0.870;AN=46;BaseQRankSum=5.608;DP=102;FS=48.142;HRun=0;HaplotypeScore=66.6356;InbreedingCoeff=0.6183;MQ=105.07;MQ0=0;MQRankSum=-7.355;QD=53.27;ReadPosRankSum=1.966;VQSLOD=1.6763;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,2:2:6.02:133,6,0	1/1:0,2:2:6.02:129,6,0	0/0:12,0:11:30.52:0,31,877	0/0:11,0:10:26.52:0,27,984	1/1:0,7:7:18.01:203,18,0	1/1:0,5:4:12.04:267,12,0	1/1:0,8:8:24.08:526,24,0	1/1:0,5:4:12.04:273,12,0	./.	1/1:0,2:2:6.02:135,6,0	1/1:0,5:5:8.89:76,9,0	1/1:0,3:3:9.03:177,9,0	1/1:1,1:2:6.02:126,6,0	1/1:0,3:3:9.03:182,9,0	0/0:6,0:6:18.06:0,18,734	1/1:0,2:2:6.02:133,6,0	1/1:0,3:3:9.03:203,9,0	./.	1/1:0,1:1:3.01:68,3,0	1/1:0,6:6:18.03:285,18,0	./.	1/1:0,3:3:9.01:142,9,0	1/1:0,2:2:6.02:130,6,0	1/1:0,2:2:6.02:129,6,0	./.	1/1:0,2:2:6.02:135,6,0	1/1:0,6:6:18.04:330,18,0	./.
chr10	32303028	.	T	TA	19996.68	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-16.406;DP=695;FS=2.657;HRun=1;HaplotypeScore=69.6339;InbreedingCoeff=0.9992;MQ=78.25;MQ0=0;MQRankSum=-3.441;QD=40.40;ReadPosRankSum=5.241;VQSLOD=5.3087;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,16:18:48.16:719,48,0	1/1:0,12:12:36.08:514,36,0	0/0:23,0:22:21.21:0,21,568	0/0:24,0:23:44.59:0,45,571	1/1:0,36:36:99:1486,102,0	1/1:0,24:24:66.22:989,66,0	1/1:1,21:22:54.18:809,54,0	0/0:26,0:26:75.24:0,75,963	1/1:0,18:18:51.17:764,51,0	1/1:1,32:33:96.33:1438,96,0	1/1:0,32:32:93.27:1369,93,0	1/1:2,34:36:93.32:1394,93,0	1/1:0,33:33:93.32:1393,93,0	1/1:2,21:23:57.19:854,57,0	0/0:28,0:28:84.26:0,84,1076	1/1:0,33:33:90.30:1349,90,0	1/1:0,21:21:60.20:899,60,0	1/1:1,23:24:60.20:889,60,0	0/0:22,0:22:66.21:0,66,857	0/0:24,0:24:72.19:0,72,891	0/0:14,0:14:42.14:0,42,545	1/1:0,24:24:63.21:944,63,0	1/1:0,21:21:54.18:797,54,0	1/1:0,13:13:36.12:539,36,0	1/1:0,26:26:66.22:989,66,0	1/1:0,32:32:96.31:1415,96,0	0/0:39,0:39:99:0,111,1378	1/1:4,10:14:30.10:447,30,0
chr10	32303395	.	T	TAA	11960.18	PASS	AB=0.577;AC=39;AF=0.696;AN=56;BaseQRankSum=-13.328;DP=594;FS=2.676;HRun=10;HaplotypeScore=64.9943;InbreedingCoeff=0.9156;MQ=67.85;MQ0=3;MQRankSum=-2.093;QD=28.75;ReadPosRankSum=2.186;VQSLOD=5.2681;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,21:25:37.37:534,37,0	1/1:2,13:15:36.12:537,36,0	0/0:10,0:8:8.74:0,9,152	0/0:8,0:7:3.38:0,3,106	1/1:4,22:27:71.12:939,71,0	1/1:2,16:20:36.12:536,36,0	1/1:4,7:11:24.08:348,24,0	0/0:33,0:34:78.04:0,78,768	0/1:4,11:15:0.36:372,0,0	1/1:1,15:17:42.13:604,42,0	1/1:3,21:26:65.92:866,66,0	1/1:4,15:17:24.08:355,24,0	1/1:3,12:17:39.42:497,39,0	1/1:1,15:18:39.13:575,39,0	0/0:24,0:24:54.04:0,54,533	1/1:4,15:20:42.14:626,42,0	1/1:4,30:36:62.17:849,62,0	1/1:2,8:10:24.08:357,24,0	0/0:23,0:24:46.20:0,46,489	0/0:30,0:30:81.15:0,81,823	0/0:22,0:22:60.12:0,60,609	1/1:1,17:19:41.63:584,42,0	1/1:3,13:17:32.60:456,33,0	1/1:5,13:19:32.60:456,33,0	1/1:2,30:35:77.74:1108,78,0	1/1:5,24:30:67.03:914,67,0	0/0:26,0:26:75.13:0,75,752	1/1:5,14:19:29.72:447,30,0
chr10	32305000	.	G	GCACA	7886.12	PASS	AB=0.730;AC=34;AF=0.654;AN=52;BaseQRankSum=-6.283;DP=689;FS=4.351;HRun=0;HaplotypeScore=158.1869;InbreedingCoeff=0.4178;MQ=55.93;MQ0=18;MQRankSum=2.867;QD=14.66;ReadPosRankSum=0.426;VQSLOD=4.6148;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:28,18:54:8.98:634,0,9	1/1:5,1:11:8.52:118,9,0	./.	./.	1/1:8,10:20:11.97:284,12,0	1/1:11,8:21:2.74:71,3,0	1/1:21,8:32:29.04:468,29,0	0/1:21,0:23:4.18:13,0,4	1/1:14,7:22:23.82:504,24,0	0/1:24,0:29:75.67:76,0,122	0/0:10,0:11:2.70:0,3,140	1/1:13,13:28:32.58:632,33,0	1/1:11,9:23:21.07:465,21,0	0/1:15,15:35:14.79:494,0,15	0/0:25,0:27:42.13:0,42,616	0/1:11,11:25:57.39:598,0,57	1/1:22,2:37:24.04:412,24,0	1/1:11,20:34:41.35:819,41,0	0/0:7,0:10:12.01:0,12,112	0/0:1,0:13:16.54:0,17,124	0/0:22,0:24:10.33:0,10,68	1/1:8,10:21:8.50:96,8,0	1/1:9,9:24:28.65:446,29,0	1/1:11,10:22:12.04:285,12,0	0/1:7,12:21:73.37:333,0,73	1/1:17,12:36:55.97:843,56,0	0/0:8,0:27:53.45:0,53,463	1/1:1,7:10:14.79:297,15,0
chr10	32305933	.	CATT	C	635.51	PASS	AC=8;AF=0.200;AN=40;BaseQRankSum=-1.897;DP=238;FS=2.276;HRun=0;HaplotypeScore=38.4589;InbreedingCoeff=0.5816;MQ=66.75;MQ0=0;MQRankSum=2.973;QD=10.42;ReadPosRankSum=-1.713;VQSLOD=2.6277;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:11:5.88:0,6,36	0/0:5,0:5:6.01:0,6,61	./.	./.	0/0:8,0:8:3.01:0,3,30	0/0:6,0:9:12:0,12,136	./.	1/1:24,8:32:24.06:303,24,0	./.	0/0:10,0:10:9.03:0,9,129	0/0:10,0:10:9.03:0,9,127	./.	0/0:6,0:7:6.02:0,6,78	0/0:6,0:10:12.04:0,12,157	0/0:10,0:10:6.02:0,6,116	0/0:7,0:7:3.01:0,3,31	0/0:11,0:16:9.03:0,9,115	0/0:9,0:9:3.01:0,3,37	1/1:9,8:17:24.06:303,24,0	1/1:4,1:5:3.01:40,3,0	./.	./.	0/0:8,0:9:6.02:0,6,76	./.	0/0:7,0:12:14.98:0,15,190	0/0:5,0:5:6.02:0,6,96	1/1:4,3:7:9.03:120,9,0	0/0:8,0:12:12:0,12,155
chr10	32307617	.	CTCTCTCTCTCTCTCTGTGTG	C	4546.84	PASS	AB=1.000;AC=25;AF=0.446;AN=56;BaseQRankSum=2.550;DP=488;FS=64.124;HRun=0;HaplotypeScore=222.9715;InbreedingCoeff=-0.7006;MQ=46.38;MQ0=40;MQRankSum=1.809;QD=10.72;ReadPosRankSum=-1.326;VQSLOD=1.6491;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:27:99:142,0,687	0/1:8,0:8:99:177,0,340	0/0:15,0:3:6.02:0,6,164	0/0:11,0:3:5.95:0,6,77	0/1:18,0:17:99:181,0,172	0/1:17,0:14:99:131,0,245	0/1:14,0:12:99:115,0,259	0/1:20,0:18:99:367,0,216	0/1:13,0:11:29.41:29,0,472	0/1:19,0:16:99:286,0,643	0/1:10,0:9:68.41:68,0,256	0/1:12,0:12:99:238,0,106	0/1:19,0:17:99:425,0,152	0/1:14,0:12:99:199,0,114	0/0:14,0:14:39.61:0,40,2478	0/1:20,0:20:99:317,0,261	0/1:22,0:22:99:274,0,134	0/1:23,0:20:99:283,0,596	0/1:11,0:10:26.08:26,0,186	0/1:23,0:22:71.33:71,0,102	0/0:24,0:19:16.59:0,17,221	0/1:12,0:7:44.10:121,0,44	0/1:14,0:13:99:113,0,137	0/1:18,0:18:99:193,0,107	0/1:22,0:22:52.14:52,0,261	0/1:25,0:24:99:214,0,1183	1/1:5,27:31:7.21:473,7,0	0/1:10,0:6:51.61:52,0,158
chr10	32307623	.	CTCTCTCTCTGTGTG	C	10266.23	PASS	AB=1.000;AC=41;AF=0.732;AN=56;BaseQRankSum=3.555;DP=477;FS=18.972;HRun=0;HaplotypeScore=176.1495;InbreedingCoeff=0.1387;MQ=47.55;MQ0=36;MQRankSum=0.817;QD=23.76;ReadPosRankSum=0.783;VQSLOD=2.8344;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:23:99:281,0,137	0/1:10,0:10:32.31:275,0,32	0/0:18,0:4:12.04:0,12,255	0/0:11,0:3:6.38:0,6,76	1/1:16,0:16:14.71:278,15,0	0/1:15,0:12:4.57:225,0,5	0/1:15,0:13:5.81:329,0,6	1/1:22,0:20:22.24:833,22,0	0/1:14,0:12:49.15:210,0,49	0/1:19,0:16:38.66:473,0,39	0/1:12,0:11:11.81:122,0,12	1/1:11,1:12:27.09:567,27,0	1/1:19,0:17:35.97:713,36,0	1/1:12,0:10:15.05:394,15,0	0/0:16,0:16:48.16:0,48,1944	1/1:17,1:18:39.12:856,39,0	1/1:25,0:25:33.11:678,33,0	0/1:22,0:19:99:391,0,205	1/1:11,0:10:18.01:333,18,0	1/1:5,16:20:6.02:183,6,0	1/1:21,0:17:12.03:214,12,0	1/1:12,0:7:5.81:133,6,0	1/1:15,0:14:21.02:395,21,0	1/1:14,1:15:23.81:496,24,0	1/1:19,0:19:26.88:553,27,0	0/1:25,0:24:99:716,0,150	1/1:29,0:28:7.78:292,8,0	1/1:9,0:7:20.01:326,20,0
chr10	32307631	.	CTGTGTG	C	10532.13	PASS	AB=0.900;AC=49;AF=0.875;AN=56;BaseQRankSum=4.219;DP=423;FS=5.739;HRun=0;HaplotypeScore=116.1925;InbreedingCoeff=0.6857;MQ=52.01;MQ0=25;MQRankSum=-3.416;QD=28.86;ReadPosRankSum=3.666;VQSLOD=4.3944;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:15:25.33:535,25,0	1/1:8,1:9:21.07:465,21,0	0/0:24,0:8:24.03:0,24,552	0/0:17,0:7:17.89:0,18,454	1/1:8,6:14:12.02:266,12,0	1/1:9,3:11:15.05:320,15,0	1/1:13,1:12:24.08:522,24,0	1/1:4,20:23:54.05:987,54,0	1/1:4,6:8:9.02:159,9,0	1/1:14,5:16:30.07:629,30,0	1/1:4,5:8:8.77:145,9,0	1/1:7,4:11:24.02:489,24,0	1/1:9,6:13:27.02:572,27,0	1/1:9,5:12:23.67:464,24,0	0/0:17,0:17:46.37:0,46,1101	1/1:6,5:11:27.05:461,27,0	1/1:19,2:21:32.67:609,33,0	0/1:16,2:17:7.89:462,0,8	1/1:3,7:9:18.03:323,18,0	1/1:17,0:17:6.02:109,6,0	1/1:2,13:13:3.01:67,3,0	1/1:6,2:5:6.02:133,6,0	1/1:8,3:10:12.04:267,12,0	1/1:10,1:11:15.05:331,15,0	1/1:16,3:19:29.89:668,30,0	1/1:14,7:20:47.60:949,48,0	1/1:28,0:28:8.84:165,9,0	1/1:6,2:7:21.07:436,21,0
chr10	32307658	.	GA	G	7604.96	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=7.176;DP=445;FS=5.229;HRun=6;HaplotypeScore=109.3962;InbreedingCoeff=0.9953;MQ=80.46;MQ0=2;MQRankSum=-7.033;QD=28.92;ReadPosRankSum=6.598;VQSLOD=3.9892;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,13:13:39.10:419,39,0	1/1:0,8:8:24.06:258,24,0	0/0:27,0:22:52.41:0,52,652	0/0:20,0:14:36.03:0,36,452	1/1:1,11:12:27.07:290,27,0	1/1:0,14:14:42.11:451,42,0	1/1:0,12:12:30.07:322,30,0	0/0:36,0:36:99:0,102,1327	1/1:1,11:12:24.06:258,24,0	1/1:1,15:16:45.11:484,45,0	1/1:0,9:9:24.06:258,24,0	1/1:0,16:16:45.11:484,45,0	1/1:1,18:19:54.14:580,54,0	1/1:2,15:17:45.11:483,45,0	0/0:17,0:17:48.14:0,48,616	1/1:1,16:17:45.11:484,45,0	1/1:2,11:13:30.07:322,30,0	1/1:0,10:10:30.08:322,30,0	0/0:14,0:14:39.09:0,39,494	0/0:23,0:23:51.17:0,51,670	0/0:16,0:16:21.07:0,21,276	1/1:0,6:6:18.05:193,18,0	1/1:0,11:11:29.24:321,29,0	1/1:1,16:17:42.10:451,42,0	1/1:0,16:16:45.11:484,45,0	1/1:2,16:18:48.12:516,48,0	0/0:29,0:29:24.02:0,24,280	1/1:0,7:7:21.05:226,21,0
chr10	32311554	.	TA	T	11059.58	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=4.232;DP=559;FS=2.391;HRun=10;HaplotypeScore=58.1057;InbreedingCoeff=0.9714;MQ=66.54;MQ0=0;MQRankSum=-0.573;QD=21.47;ReadPosRankSum=1.442;VQSLOD=5.9151;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,24:24:68.99:599,69,0	1/1:0,15:15:41.99:365,42,0	0/0:6,0:6:9.02:0,9,97	0/0:7,0:7:14.76:0,15,115	1/1:5,23:28:65.92:565,66,0	1/1:0,26:26:65.99:573,66,0	1/1:4,14:18:40.89:333,41,0	1/1:4,27:31:80.94:696,81,0	1/1:2,11:13:26.99:234,27,0	1/1:3,17:20:50.97:439,51,0	1/1:5,26:31:74.98:651,75,0	1/1:1,18:19:50.99:443,51,0	1/1:3,29:32:80.97:703,81,0	1/1:4,18:22:47.99:417,48,0	0/0:31,0:31:72.11:0,72,762	1/1:2,23:25:68.98:599,69,0	1/1:3,13:16:38.99:339,39,0	1/1:3,11:14:32.99:286,33,0	1/1:1,16:17:47.99:417,48,0	1/1:4,21:25:62.95:541,63,0	1/1:2,18:20:50.99:443,51,0	1/1:3,14:17:29.98:260,30,0	1/1:1,14:15:29.98:260,30,0	1/1:0,10:10:29.99:260,30,0	1/1:1,24:25:59.99:521,60,0	1/1:3,13:16:35.96:309,36,0	1/1:2,22:24:59.99:521,60,0	1/1:1,11:12:32.99:286,33,0
chr10	32311787	.	A	ACCCTCCAGGTTTATGT	100996.70	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-1.731;DP=684;FS=5.320;HRun=0;HaplotypeScore=247.7920;InbreedingCoeff=0.9591;MQ=62.14;MQ0=0;MQRankSum=-11.434;QD=163.16;ReadPosRankSum=1.095;VQSLOD=4.6723;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,3:26:51.17:3052,51,0	1/1:8,6:14:36.12:2477,36,0	0/0:14,0:14:23.87:0,24,1104	0/0:25,0:22:48.07:0,48,1410	1/1:13,16:33:81.28:4545,81,0	1/1:11,6:20:48.16:2727,48,0	1/1:18,7:26:72.25:4794,72,0	1/1:44,1:48:99:8189,138,0	1/1:11,4:17:42.14:2614,42,0	1/1:18,8:27:81.28:5178,81,0	1/1:11,9:23:60.21:3511,60,0	1/1:17,11:31:78.27:5571,78,0	1/1:15,14:34:75.26:5245,75,0	1/1:12,11:28:72.25:4761,72,0	0/0:26,0:26:69.24:0,69,3137	1/1:14,14:29:81.28:5811,81,0	1/1:8,1:12:24.08:1634,24,0	1/1:5,2:8:18.06:1187,18,0	1/1:14,6:21:60.21:3244,60,0	1/1:16,18:38:99:6708,99,0	1/1:6,1:7:6.02:431,6,0	1/1:15,16:35:87.30:5900,87,0	1/1:12,11:24:63.22:3965,63,0	1/1:8,6:15:36.12:2198,36,0	1/1:15,18:35:90.31:6146,90,0	1/1:16,11:29:84.29:5095,84,0	1/1:17,5:26:57.19:3901,57,0	1/1:4,5:11:27.09:2111,27,0
chr10	32312709	.	CT	C	6194.67	PASS	AB=0.816;AC=41;AF=0.732;AN=56;BaseQRankSum=4.474;DP=625;FS=6.566;HRun=13;HaplotypeScore=75.7962;InbreedingCoeff=0.8029;MQ=74.67;MQ0=2;MQRankSum=-0.132;QD=12.64;ReadPosRankSum=5.888;VQSLOD=4.7735;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,29:33:63.08:553,63,0	1/1:1,8:9:14.87:107,15,0	0/1:22,2:24:1.47:1,0,241	0/0:22,0:18:3.82:0,4,206	1/1:5,27:32:32.53:393,33,0	1/1:5,16:21:12.49:255,12,0	1/1:4,18:23:46.76:334,47,0	0/0:23,1:24:16.89:0,17,338	1/1:3,9:12:14.89:109,15,0	1/1:7,14:21:15.55:277,16,0	1/1:3,17:20:45.59:330,46,0	1/1:4,14:18:38.77:284,39,0	1/1:9,21:30:42.07:364,42,0	1/1:6,15:21:44.52:321,45,0	0/0:19,2:21:23.13:0,23,373	1/1:5,16:21:38.61:280,39,0	1/1:6,19:25:41.71:306,42,0	1/1:5,24:30:61.47:438,61,0	0/0:19,0:19:36.01:0,36,332	0/0:22,0:22:51.95:0,52,490	0/1:10,1:14:0.76:1,0,109	0/1:8,15:26:1.63:287,0,2	1/1:1,16:17:38.60:284,39,0	1/1:6,21:29:60.71:428,61,0	1/1:7,15:22:35.64:258,36,0	1/1:7,23:30:36.32:427,36,0	0/0:25,0:24:48.05:0,48,453	1/1:3,8:12:20.95:156,21,0
chr10	32314455	.	TCACACA	T	1596.48	PASS	AB=1.000;AC=27;AF=0.794;AN=34;BaseQRankSum=0.493;DP=509;FS=0.000;HRun=0;HaplotypeScore=119.7680;InbreedingCoeff=0.2716;MQ=68.74;MQ0=21;MQRankSum=1.031;QD=6.62;ReadPosRankSum=-0.134;VQSLOD=1.8946;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:30,1:29:2.94:54,3,0	1/1:10,0:11:15.02:203,15,0	./.	./.	1/1:16,0:15:9.03:176,9,0	./.	./.	./.	1/1:15,0:15:6:83,6,0	1/1:17,0:17:2.99:24,3,0	./.	1/1:15,0:16:6.01:59,6,0	1/1:29,0:27:24.05:337,24,0	./.	0/0:20,0:19:6.02:0,6,185	1/1:17,1:15:9.03:154,9,0	1/1:11,0:12:6.02:98,6,0	1/1:8,0:7:3.01:52,3,0	0/0:17,0:15:10.76:0,11,119	0/1:12,0:12:1.92:2,0,18	0/1:18,0:15:13.96:32,0,14	./.	./.	./.	./.	1/1:16,0:16:9.01:113,9,0	0/1:12,0:12:41.83:48,0,42	1/1:7,0:7:15.05:280,15,0
chr10	32314502	.	CACACACACACAGAG	C	1705.96	PASS	AB=1.000;AC=24;AF=0.480;AN=50;BaseQRankSum=4.682;DP=557;FS=19.390;HRun=0;HaplotypeScore=165.4440;InbreedingCoeff=-0.1031;MQ=33.42;MQ0=87;MQRankSum=-1.893;QD=4.43;ReadPosRankSum=0.160;VQSLOD=1.6509;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:25:2.14:15,0,2	0/1:9,0:9:36.84:146,0,37	./.	./.	0/1:20,0:11:12.71:62,0,13	0/0:24,0:22:3.46:0,3,24	1/1:23,0:12:11.27:106,11,0	1/1:29,0:19:3.67:207,4,0	0/1:18,0:18:30.31:30,0,124	0/1:17,0:13:34.36:237,0,34	0/0:18,0:15:2.98:0,3,21	0/1:19,0:16:2.38:91,0,2	0/1:19,0:15:99:113,0,123	1/1:20,0:18:1.30:33,1,0	0/0:20,0:17:21.07:0,21,597	0/1:25,0:20:9.26:61,0,9	0/1:22,0:20:22.15:59,0,22	0/1:21,0:14:56.69:58,0,57	0/1:13,0:11:99:129,0,508	0/0:21,0:15:9.03:0,9,219	0/0:21,0:12:6.08:0,6,72	0/0:24,0:20:5.98:0,6,68	1/1:10,16:23:3.01:30,3,0	1/1:33,0:16:3.01:32,3,0	./.	0/1:28,0:27:99:321,0,187	0/0:21,0:19:26.87:0,27,407	1/1:14,0:11:10.73:126,11,0
chr10	32314504	.	CACACACACAG	C	2115.23	PASS	AB=1.000;AC=35;AF=0.729;AN=48;BaseQRankSum=3.718;DP=556;FS=2.521;HRun=0;HaplotypeScore=149.6407;InbreedingCoeff=0.1731;MQ=33.15;MQ0=88;MQRankSum=-1.091;QD=4.95;ReadPosRankSum=1.202;VQSLOD=2.8159;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:24:2.55:38,3,0	1/1:9,0:9:7.61:230,8,0	./.	./.	1/1:20,0:11:9.03:158,9,0	0/0:15,9:22:0.47:0,0,1	1/1:23,0:12:4.38:37,4,0	1/1:32,0:22:7.39:123,7,0	0/1:17,0:17:45.11:45,0,60	1/1:17,0:13:16.83:172,17,0	./.	1/1:18,0:15:14.14:154,14,0	0/1:19,0:15:6.94:282,0,7	1/1:16,3:17:1.37:14,1,0	0/0:21,0:18:2.33:0,2,375	1/1:25,0:20:12.36:112,12,0	1/1:22,0:20:7.53:89,8,0	1/1:21,0:14:1.55:82,2,0	0/1:13,0:11:42.97:43,0,337	0/0:21,0:15:9.01:0,9,128	0/1:23,0:14:7.66:8,0,34	0/0:23,0:19:2.99:0,3,24	1/1:26,0:23:2.80:13,3,0	1/1:32,0:16:2.88:15,3,0	./.	1/1:28,0:27:27.49:358,27,0	0/1:20,0:17:4.13:4,0,193	1/1:14,0:11:19.93:274,20,0
chr10	32314506	.	CACACACAGAG	C	3527.60	PASS	AB=1.000;AC=35;AF=0.761;AN=46;BaseQRankSum=1.894;DP=541;FS=6.143;HRun=0;HaplotypeScore=137.7020;InbreedingCoeff=0.1405;MQ=32.13;MQ0=89;MQRankSum=-1.184;QD=8.48;ReadPosRankSum=-0.119;VQSLOD=1.9530;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:22:2.58:54,3,0	1/1:8,0:8:7.58:191,8,0	./.	./.	1/1:18,1:10:9.03:176,9,0	0/0:24,0:22:0:0,0,0	1/1:23,0:12:10.82:106,11,0	1/1:33,0:22:28.28:334,28,0	0/1:16,0:16:40.54:106,0,41	1/1:15,1:12:3.94:310,4,0	./.	1/1:17,0:14:14.87:218,15,0	1/1:17,1:14:23.58:324,24,0	1/1:19,0:17:1.97:27,2,0	0/0:20,0:17:21.07:0,21,479	1/1:21,2:18:15:207,15,0	0/1:22,0:20:5:157,0,5	1/1:20,0:14:7.18:101,7,0	0/1:12,0:10:99:132,0,185	0/0:20,0:14:6:0,6,67	0/1:23,0:14:14.19:31,0,14	./.	1/1:26,0:23:3.01:30,3,0	1/1:32,1:16:3.01:32,3,0	./.	1/1:25,2:26:44.94:654,45,0	0/1:20,0:17:35.67:36,0,118	1/1:14,0:11:18.03:302,18,0
chr10	32314508	.	CACACAGAGAG	C	1691.95	PASS	AB=1.000;AC=35;AF=0.761;AN=46;BaseQRankSum=3.594;DP=535;FS=11.349;HRun=0;HaplotypeScore=141.8041;InbreedingCoeff=0.0585;MQ=31.91;MQ0=88;MQRankSum=-0.959;QD=3.91;ReadPosRankSum=-1.148;VQSLOD=2.0437;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:22:2.60:35,3,0	1/1:8,0:8:5.28:89,5,0	./.	./.	1/1:19,0:10:9.03:106,9,0	0/1:24,0:22:0.03:0,0,0	1/1:23,0:12:3.82:34,4,0	1/1:32,0:22:9.76:138,10,0	0/1:15,0:15:39.56:45,0,40	1/1:16,0:12:4.57:144,5,0	./.	1/1:17,0:14:11.85:140,12,0	1/1:16,0:12:22.43:202,22,0	1/1:18,0:16:2.44:16,2,0	0/0:21,0:18:27.08:0,27,658	1/1:23,0:18:12.34:100,12,0	0/1:22,0:20:20.89:77,0,21	0/1:21,0:14:0.40:43,0,0	0/1:13,0:10:77.93:78,0,105	0/0:20,0:14:5.83:0,6,38	1/1:22,0:13:2.49:41,2,0	./.	1/1:26,0:23:2.68:11,3,0	1/1:33,0:16:2.84:14,3,0	./.	0/1:27,0:26:19.28:270,0,19	0/1:19,0:16:44.72:75,0,45	1/1:13,0:10:15.92:165,16,0
chr10	32314510	.	CACAGAG	C	2183.29	PASS	AB=1.000;AC=38;AF=0.826;AN=46;BaseQRankSum=1.923;DP=527;FS=3.947;HRun=0;HaplotypeScore=125.6941;InbreedingCoeff=0.0970;MQ=31.65;MQ0=87;MQRankSum=-3.093;QD=4.91;ReadPosRankSum=-0.729;VQSLOD=2.1631;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:22:2.77:17,3,0	0/1:8,0:8:2.32:18,0,2	./.	./.	1/1:19,0:10:8.68:47,9,0	0/1:24,0:22:0:0,0,0	1/1:23,0:12:11.36:106,11,0	1/1:33,0:22:29.10:335,29,0	0/1:15,0:15:5.22:42,0,5	1/1:15,0:12:4.15:265,4,0	./.	1/1:16,0:13:11.80:125,12,0	1/1:15,0:12:19.72:93,20,0	1/1:18,0:16:2.49:31,2,0	0/0:20,0:17:24.08:0,24,397	1/1:20,0:16:8.87:68,9,0	0/1:22,0:20:4.27:74,0,4	1/1:20,0:14:8.07:64,8,0	0/1:11,0:8:3.22:186,0,3	1/1:20,0:14:6:70,6,0	1/1:21,0:12:2.40:19,2,0	./.	1/1:26,0:23:3.01:30,3,0	1/1:33,0:16:3.01:32,3,0	./.	1/1:27,0:26:46.03:520,46,0	0/1:19,0:16:13.78:65,0,14	1/1:13,0:10:17.01:91,17,0
chr10	32314540	.	CAGAGACAGAGACAGAGACAGAGATGACAG	C	4840.05	PASS	AB=1.000;AC=33;AF=0.660;AN=50;BaseQRankSum=3.872;DP=521;FS=0.731;HRun=0;HaplotypeScore=189.9962;InbreedingCoeff=0.4059;MQ=33.61;MQ0=64;MQRankSum=-4.329;QD=15.97;ReadPosRankSum=0.939;VQSLOD=3.6890;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:16:0.47:0,0,1	1/1:6,0:6:5.98:144,6,0	0/0:29,0:7:21.07:0,21,511	0/0:56,0:16:23.78:0,24,551	0/0:16,0:9:0.47:0,0,1	1/1:20,0:19:6.02:236,6,0	1/1:19,0:13:4.35:36,4,0	1/1:29,0:20:11.86:359,12,0	1/1:14,0:14:7.03:219,7,0	0/1:16,0:14:25.88:1113,0,26	./.	1/1:16,0:13:9.03:286,9,0	1/1:12,0:8:3.01:101,3,0	1/1:15,0:14:4.26:134,4,0	0/0:21,0:20:45.02:0,45,3667	1/1:14,0:12:4.90:39,5,0	1/1:17,0:18:10.81:339,11,0	1/1:12,0:8:6.02:168,6,0	0/1:19,0:17:99:100,0,200	0/0:15,0:10:0:0,0,0	0/0:14,0:11:2.67:0,3,47	./.	0/1:19,0:17:0:0,0,0	1/1:25,0:13:0.47:1,0,0	./.	1/1:18,0:17:39:1388,39,0	1/1:20,0:18:0.94:2,1,0	1/1:4,7:9:3.01:172,3,0
chr10	32314542	.	GAGAC	G	528.43	PASS	AB=0.977;AC=25;AF=0.521;AN=48;BaseQRankSum=6.113;DP=527;FS=3.898;HRun=0;HaplotypeScore=134.0061;InbreedingCoeff=0.3376;MQ=35.26;MQ0=64;MQRankSum=-1.356;QD=1.77;ReadPosRankSum=3.822;VQSLOD=2.4786;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:18,1:16:0.13:0,0,0	0/1:6,0:6:5.50:17,0,6	0/0:33,0:8:13.77:0,14,274	0/1:60,0:17:0.03:0,0,308	./.	0/1:17,2:18:0.05:1,0,0	1/1:16,2:12:1.50:29,2,0	0/0:31,0:22:60.35:0,60,580	0/1:15,0:15:6.87:16,0,7	0/1:17,0:15:76.75:77,0,87	./.	1/1:16,0:13:8.97:76,9,0	0/0:10,0:6:2.74:0,3,12	1/1:12,1:13:2.71:28,3,0	0/0:21,0:20:45.13:0,45,1055	1/1:13,2:13:2.88:33,3,0	1/1:18,0:18:7.24:80,7,0	1/1:10,1:7:5.98:54,6,0	0/0:21,0:19:36.45:0,36,391	0/1:15,0:10:0:0,0,0	0/0:12,0:10:2.77:0,3,16	./.	1/1:19,0:17:2.84:17,3,0	0/0:25,0:13:1.24:0,1,3	./.	1/1:16,1:16:6.07:235,6,0	1/1:20,0:18:0.63:2,1,0	0/0:11,0:9:2.88:0,3,16
chr10	32314544	.	GAC	G	354.35	PASS	AB=0.948;AC=21;AF=0.420;AN=50;BaseQRankSum=6.528;DP=515;FS=0.000;HRun=0;HaplotypeScore=127.5733;InbreedingCoeff=0.3773;MQ=35.27;MQ0=58;MQRankSum=-1.220;QD=1.80;ReadPosRankSum=1.528;VQSLOD=2.1748;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:19,0:16:0:0,0,0	0/1:5,1:6:4.13:4,0,8	0/0:34,1:8:8.03:0,8,256	0/0:59,1:18:5.43:0,5,367	0/0:16,0:9:0:0,0,0	1/1:16,1:16:2.62:17,3,0	0/0:18,0:12:2.34:0,2,8	0/0:32,0:23:65.64:0,66,814	0/1:13,2:15:9.05:10,0,9	0/1:17,0:15:52.91:53,0,82	./.	1/1:14,1:13:8.62:55,9,0	0/0:10,0:6:2.84:0,3,14	1/1:13,0:13:2.99:23,3,0	0/0:21,0:20:33.30:0,33,796	0/0:15,0:13:0.77:0,1,2	1/1:17,1:18:7.66:36,8,0	1/1:9,1:7:5.75:46,6,0	0/0:20,0:18:47.41:0,47,471	0/1:14,0:10:0.01:0,0,0	0/0:13,0:11:2.55:0,3,18	./.	1/1:15,0:14:2.90:17,3,0	0/0:22,1:13:1.65:0,2,6	./.	1/1:18,1:18:13.63:229,14,0	1/1:19,0:17:0.85:2,1,0	0/0:9,0:8:2.88:0,3,15
chr10	32314548	.	GAGAC	G	1317.33	PASS	AB=0.820;AC=24;AF=0.500;AN=48;BaseQRankSum=5.782;DP=525;FS=0.769;HRun=0;HaplotypeScore=135.3769;InbreedingCoeff=0.3465;MQ=39.91;MQ0=54;MQRankSum=-3.444;QD=5.01;ReadPosRankSum=3.929;VQSLOD=2.5258;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:11,7:15:0.13:0,0,0	0/1:8,1:9:6.13:19,0,6	0/0:40,0:10:27.08:0,27,410	0/0:76,0:23:28.61:0,29,454	./.	0/1:8,7:14:0.45:0,0,1	1/1:10,7:11:2.71:34,3,0	0/0:29,0:21:52.56:0,53,457	0/1:7,8:15:6.84:51,0,7	0/1:9,6:13:99:266,0,108	0/1:13,6:14:0:0,0,0	1/1:5,9:12:9.02:139,9,0	0/0:7,2:5:2.80:0,3,13	1/1:4,8:12:2.71:55,3,0	0/0:21,0:20:48.16:0,48,1102	1/1:11,4:13:5.36:51,5,0	1/1:6,10:16:7.96:107,8,0	1/1:6,4:7:6.02:86,6,0	0/1:22,0:20:71.94:72,0,329	0/1:14,1:11:0:0,0,0	0/0:16,0:14:8.79:0,9,97	./.	0/1:12,3:14:0:0,0,0	./.	./.	1/1:9,10:18:35.94:575,36,0	0/1:17,0:16:0.18:0,0,0	0/0:9,0:8:2.88:0,3,15
chr10	32314549	.	AGACAGAGACAGAGAT	A	3463.19	PASS	AB=0.922;AC=38;AF=0.731;AN=52;BaseQRankSum=4.431;DP=526;FS=1.616;HRun=0;HaplotypeScore=159.6640;InbreedingCoeff=0.4791;MQ=39.96;MQ0=52;MQRankSum=-3.261;QD=10.16;ReadPosRankSum=0.955;VQSLOD=2.6962;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:17,0:15:0.07:0,0,0	1/1:9,0:9:7.20:56,7,0	0/0:42,0:10:27.97:0,28,480	0/0:80,0:24:45.42:0,45,658	0/0:15,0:10:0:0,0,0	1/1:15,0:14:6.02:83,6,0	1/1:16,0:10:0.47:2,0,0	1/1:29,0:21:48.13:756,48,0	1/1:15,0:15:5.07:54,5,0	0/1:14,0:12:9.50:415,0,10	0/1:19,0:14:0:0,0,0	1/1:14,0:12:8.94:101,9,0	1/1:8,0:5:2.99:24,3,0	1/1:13,0:13:3.48:54,3,0	0/0:22,0:21:51.18:0,51,2125	1/1:15,0:13:5.48:81,5,0	1/1:16,0:16:10.02:112,10,0	1/1:10,0:7:6:72,6,0	1/1:22,0:20:34.23:776,34,0	0/1:15,0:11:0.02:0,0,0	1/1:16,0:14:9.03:202,9,0	./.	0/1:13,0:12:0:0,0,0	1/1:20,0:12:0.47:1,0,0	./.	1/1:19,0:18:41.35:621,41,0	0/1:2,15:16:0:0,0,0	1/1:9,0:8:3.01:51,3,0
chr10	32314557	.	ACAGAGAT	A	2555.79	PASS	AB=0.962;AC=37;AF=0.712;AN=52;BaseQRankSum=4.146;DP=508;FS=1.514;HRun=0;HaplotypeScore=138.5594;InbreedingCoeff=0.4655;MQ=43.27;MQ0=54;MQRankSum=-2.213;QD=8.52;ReadPosRankSum=0.498;VQSLOD=2.7947;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:16,0:14:0:0,0,0	1/1:7,0:7:2.38:26,2,0	0/0:55,0:11:30.99:0,31,523	0/0:99,0:29:55.60:0,56,774	0/0:15,0:12:0:0,0,0	1/1:12,0:12:5.80:39,6,0	0/1:11,0:7:0.04:0,0,0	1/1:23,0:17:48.16:756,48,0	1/1:15,0:15:1.40:46,1,0	0/1:14,0:12:15.26:360,0,15	0/1:17,0:13:0:0,0,0	1/1:13,0:11:8.94:114,9,0	1/1:8,0:6:4.99:17,5,0	1/1:13,0:13:2.74:53,3,0	0/0:21,0:21:57.18:0,57,1501	1/1:15,0:13:8.61:61,9,0	1/1:16,0:16:6.93:65,7,0	1/1:9,0:6:6:72,6,0	1/1:11,4:13:37.45:475,37,0	0/1:9,5:10:0.06:0,0,0	1/1:13,0:12:7.85:55,8,0	./.	0/1:11,0:9:0:0,0,0	1/1:17,1:11:0.47:1,0,0	./.	1/1:16,0:15:44.29:545,44,0	0/1:16,0:16:0.06:0,0,0	1/1:8,0:8:0.47:1,0,0
chr10	32314561	.	AGAT	A	2643.91	PASS	AB=0.734;AC=35;AF=0.700;AN=50;BaseQRankSum=4.901;DP=514;FS=4.542;HRun=0;HaplotypeScore=130.6343;InbreedingCoeff=0.5593;MQ=46.04;MQ0=45;MQRankSum=-2.025;QD=10.75;ReadPosRankSum=0.847;VQSLOD=3.2458;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:8,6:14:0:1,0,0	1/1:2,6:8:9.03:132,9,0	0/0:60,0:12:30.10:0,30,484	0/0:104,0:34:48.63:0,49,902	0/0:7,8:12:0:0,0,0	1/1:7,5:12:5.89:82,6,0	0/1:7,3:7:0:0,0,0	1/1:22,0:17:47.44:577,47,0	1/1:11,4:15:6.10:63,6,0	1/1:9,6:13:34.58:369,35,0	./.	1/1:9,3:11:5.98:47,6,0	1/1:4,3:6:6.02:89,6,0	1/1:8,5:13:2.79:49,3,0	0/0:22,0:22:60.20:0,60,1336	1/1:7,9:13:8.94:114,9,0	1/1:14,3:16:5.70:67,6,0	1/1:7,1:6:3.43:20,3,0	1/1:5,10:13:39.10:547,39,0	0/0:11,3:10:0.14:0,0,1	1/1:4,9:12:9.03:153,9,0	./.	0/1:7,4:9:0:0,0,0	1/1:10,4:11:0.47:1,0,0	./.	1/1:11,5:15:41.99:424,42,0	0/0:16,0:16:0.47:0,0,1	1/1:8,0:8:3.01:40,3,0
chr10	32314563	.	AT	A	2403.01	PASS	AB=0.741;AC=37;AF=0.740;AN=50;BaseQRankSum=5.452;DP=516;FS=4.443;HRun=1;HaplotypeScore=128.0483;InbreedingCoeff=0.5852;MQ=46.52;MQ0=40;MQRankSum=-2.573;QD=8.31;ReadPosRankSum=0.619;VQSLOD=1.0426;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:7,7:14:0:0,0,0	1/1:6,1:8:8.46:57,8,0	0/0:62,0:13:33.11:0,33,496	0/0:109,0:36:64.86:0,65,871	0/1:9,6:12:0:0,0,0	1/1:5,7:12:5.79:39,6,0	0/1:3,7:7:0:0,0,0	1/1:5,17:18:51.17:707,51,0	1/1:6,9:15:8.16:67,8,0	1/1:8,7:13:15.63:357,16,0	./.	1/1:3,9:11:8.86:96,9,0	1/1:3,3:6:5.46:29,5,0	1/1:5,8:13:2.77:41,3,0	0/0:22,0:22:63.20:0,63,982	1/1:11,7:15:14.55:93,15,0	1/1:3,12:16:9.22:76,9,0	1/1:1,5:6:5.93:59,6,0	1/1:14,1:13:36.64:310,37,0	0/1:9,2:9:0.10:0,0,0	1/1:13,0:12:7.79:30,8,0	./.	0/1:6,5:9:0:0,0,0	0/1:7,6:11:0:0,0,0	./.	1/1:6,10:17:50.64:562,51,0	0/1:16,0:16:0:0,0,0	1/1:8,0:8:2.68:11,3,0
chr10	32314567	.	CAG	C	903.92	PASS	AB=0.826;AC=29;AF=0.537;AN=54;BaseQRankSum=3.093;DP=536;FS=10.406;HRun=0;HaplotypeScore=141.0029;InbreedingCoeff=0.3658;MQ=46.62;MQ0=37;MQRankSum=1.325;QD=3.78;ReadPosRankSum=-0.654;VQSLOD=2.2258;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:10,6:16:0.86:2,1,0	1/1:2,6:8:9.03:102,9,0	0/0:62,0:17:37.26:0,37,500	0/0:109,0:38:62.46:0,62,941	1/1:8,8:13:2.99:40,3,0	1/1:8,5:13:8.97:86,9,0	0/1:7,3:7:0:0,0,0	0/0:27,0:23:63.20:0,63,907	0/1:11,4:15:16.28:54,0,16	0/1:11,4:13:99:114,0,164	1/1:13,5:14:3.01:40,3,0	0/0:9,3:11:3.01:0,3,39	1/1:4,3:6:5.98:69,6,0	0/0:8,5:13:2.93:0,3,19	0/0:23,0:23:47.11:0,47,1044	1/1:10,8:15:14.89:149,15,0	1/1:14,3:16:6.39:55,6,0	0/1:6,1:7:12.96:13,0,21	0/0:16,0:14:38.76:0,39,314	0/0:11,0:10:2.72:0,3,25	0/0:12,0:12:10.99:0,11,112	./.	1/1:8,4:10:2.96:23,3,0	0/1:9,4:11:0:0,0,0	1/1:7,4:11:5.58:33,6,0	0/1:14,5:18:99:253,0,131	0/1:16,0:16:0:0,0,0	1/1:8,0:8:3.01:30,3,0
chr10	32318983	.	T	TA	25318.04	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-8.465;DP=624;FS=8.283;HRun=0;HaplotypeScore=50.1573;InbreedingCoeff=0.9958;MQ=76.29;MQ0=0;MQRankSum=-5.674;QD=43.50;ReadPosRankSum=2.923;VQSLOD=4.9744;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,16:17:22.79:603,23,0	1/1:0,13:13:36.12:575,36,0	0/0:18,0:18:51.17:0,51,694	0/0:6,0:6:18.06:0,18,250	1/1:1,34:35:87.30:1389,87,0	1/1:1,28:29:75.26:1198,75,0	1/1:0,16:16:45.15:707,45,0	1/1:1,38:39:99:1818,114,0	1/1:0,21:21:60.20:959,60,0	1/1:0,24:24:69.24:1097,69,0	1/1:0,35:35:96.26:1502,96,0	1/1:0,31:31:87.30:1390,87,0	1/1:0,33:33:90.31:1438,90,0	1/1:1,21:22:60.20:959,60,0	0/0:18,0:18:40.21:0,40,686	1/1:0,28:28:72.25:1151,72,0	1/1:1,12:13:33.11:526,33,0	1/1:0,13:13:36.12:575,36,0	1/1:0,19:19:57.18:886,57,0	1/1:0,30:30:87.23:1340,87,0	1/1:0,17:17:39.13:623,39,0	1/1:0,25:25:75.17:1153,75,0	1/1:0,18:18:54.18:862,54,0	1/1:0,13:13:33.11:527,33,0	1/1:0,20:20:57.19:911,57,0	1/1:0,17:17:51.16:788,51,0	1/1:0,36:35:96.33:1534,96,0	1/1:0,18:18:51.17:809,51,0
chr10	32319308	.	G	GTTC	31847.08	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-9.511;DP=645;FS=16.308;HRun=0;HaplotypeScore=78.3247;InbreedingCoeff=0.9779;MQ=79.52;MQ0=0;MQRankSum=-6.885;QD=54.72;ReadPosRankSum=2.868;VQSLOD=5.8084;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,27:29:70.99:1517,71,0	1/1:0,3:3:9.03:201,9,0	0/0:17,0:17:42.11:0,42,625	0/0:19,0:19:45.08:0,45,690	1/1:2,21:23:60.07:1138,60,0	1/1:1,20:21:57.20:1273,57,0	1/1:3,12:17:39.13:842,39,0	1/1:8,33:42:99:2505,120,0	1/1:1,13:14:36.12:774,36,0	1/1:4,26:31:84.29:1844,84,0	1/1:4,22:26:63.22:1406,63,0	1/1:0,19:21:54.18:1175,54,0	1/1:2,22:25:63.22:1406,63,0	1/1:3,24:28:66.23:1444,66,0	0/0:27,0:27:81.26:0,81,1298	1/1:3,13:16:36.12:795,36,0	1/1:5,37:42:99:2164,99,0	1/1:1,12:13:30.10:670,30,0	1/1:6,21:27:66.23:1446,66,0	1/1:1,23:25:66.23:1422,66,0	1/1:3,27:30:75.26:1647,75,0	1/1:2,20:22:60.20:1280,60,0	1/1:1,19:21:51.18:1127,51,0	1/1:1,19:20:51.18:1136,51,0	1/1:3,20:23:51.17:1110,51,0	1/1:1,25:26:75.26:1652,75,0	1/1:2,24:27:63.22:1405,63,0	1/1:0,10:10:21.07:469,21,0
chr10	32320520	.	C	CT	21489.80	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=1.426;DP=635;FS=5.484;HRun=2;HaplotypeScore=126.1782;InbreedingCoeff=0.9993;MQ=85.10;MQ0=0;MQRankSum=-7.142;QD=37.97;ReadPosRankSum=4.779;VQSLOD=4.0129;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,30:31:84.28:1208,84,0	1/1:0,9:9:27.09:389,27,0	0/0:26,0:26:68.83:0,69,779	0/0:13,0:13:33.10:0,33,403	1/1:1,26:27:78.26:1115,78,0	1/1:0,26:26:72.24:1037,72,0	1/1:1,14:15:39.13:562,39,0	1/1:1,24:25:72.21:983,72,0	1/1:0,21:21:57.19:820,57,0	1/1:0,30:30:87.28:1232,87,0	1/1:3,22:25:66.12:884,66,0	1/1:3,25:28:63.21:907,63,0	1/1:2,27:29:78.26:1123,78,0	1/1:0,27:27:75.25:1080,75,0	0/0:30,0:30:84.26:0,84,1041	1/1:0,17:17:45.15:648,45,0	1/1:1,24:25:63.21:907,63,0	1/1:1,14:15:39.13:561,39,0	1/1:2,15:16:45.10:590,45,0	1/1:0,29:29:87.21:1206,87,0	1/1:0,19:19:45.15:648,45,0	1/1:0,17:18:42.14:602,42,0	1/1:2,16:18:42.14:605,42,0	1/1:0,22:22:63.21:907,63,0	1/1:1,21:22:57.19:821,57,0	1/1:0,32:32:96.31:1361,96,0	1/1:3,23:26:60.20:862,60,0	1/1:1,12:13:30.10:432,30,0
chr10	32321415	.	TGC	T	2236.06	PASS	AB=0.989;AC=39;AF=0.696;AN=56;BaseQRankSum=2.160;DP=548;FS=16.034;HRun=0;HaplotypeScore=135.9316;InbreedingCoeff=0.2609;MQ=39.23;MQ0=30;MQRankSum=1.566;QD=4.83;ReadPosRankSum=-2.201;VQSLOD=1.8795;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:22:2.98:21,3,0	1/1:12,1:12:6:46,6,0	0/0:25,0:2:5.84:0,6,40	0/0:29,0:3:1.19:0,1,15	0/0:21,0:21:3.15:0,3,18	1/1:24,1:24:20.85:155,21,0	0/1:29,1:26:2.45:125,0,2	1/1:15,0:10:15.82:88,16,0	1/1:18,1:17:14.27:119,14,0	1/1:18,0:14:24.05:163,24,0	1/1:15,0:15:0.89:2,1,0	0/1:27,0:24:2.46:135,0,2	0/1:19,0:19:41.64:99,0,42	1/1:23,0:20:28.83:196,29,0	0/0:9,0:8:16.76:0,17,196	0/1:14,1:13:6.13:75,0,6	0/1:21,0:18:17.09:70,0,17	1/1:16,0:15:21.81:166,22,0	1/1:6,0:4:11.82:79,12,0	0/1:13,0:13:0.26:0,0,0	0/1:30,0:23:0:0,0,0	1/1:19,0:19:23.83:173,24,0	1/1:15,0:14:6.98:81,7,0	1/1:18,2:18:20.67:146,21,0	0/1:32,0:28:3.01:68,0,3	1/1:25,0:22:23.18:285,23,0	1/1:17,0:15:5.65:40,6,0	0/1:6,0:6:6.30:52,0,6
chr10	32321417	.	CGCGT	C	4910.18	PASS	AB=0.815;AC=39;AF=0.722;AN=54;BaseQRankSum=0.468;DP=530;FS=3.428;HRun=0;HaplotypeScore=132.5410;InbreedingCoeff=0.2864;MQ=39.12;MQ0=28;MQRankSum=2.281;QD=11.78;ReadPosRankSum=-1.554;VQSLOD=4.4156;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:21,1:20:3.01:57,3,0	1/1:4,8:11:5.48:56,5,0	0/0:25,0:2:6.02:0,6,125	0/0:31,0:3:7.82:0,8,41	0/0:6,13:20:3.81:0,4,19	1/1:19,6:24:14.41:201,14,0	1/1:18,10:25:6.79:256,7,0	1/1:10,3:8:15.50:155,16,0	1/1:18,0:16:12.79:279,13,0	0/1:12,5:13:28.43:322,0,28	1/1:3,11:14:0.89:2,1,0	1/1:23,3:23:3.88:379,4,0	0/1:19,0:19:95.22:204,0,95	1/1:20,1:19:27.04:358,27,0	0/0:8,0:7:18.06:0,18,408	0/1:13,2:14:1.94:141,0,2	0/1:17,3:18:20.84:181,0,21	1/1:14,1:14:30.60:355,31,0	1/1:5,1:4:6.59:121,7,0	0/1:2,9:11:0:0,0,0	./.	1/1:15,5:20:26.98:360,27,0	1/1:12,3:14:7.07:184,7,0	1/1:19,1:18:20.97:328,21,0	0/1:24,7:27:4.52:184,0,5	1/1:21,3:21:39.89:640,40,0	1/1:4,13:16:5.49:75,5,0	0/1:5,1:6:2.07:71,0,2
chr10	32321419	.	CGT	C	2251.94	PASS	AB=0.966;AC=37;AF=0.685;AN=54;BaseQRankSum=1.170;DP=530;FS=6.313;HRun=0;HaplotypeScore=134.3864;InbreedingCoeff=0.1305;MQ=39.21;MQ0=27;MQRankSum=2.342;QD=5.44;ReadPosRankSum=-0.463;VQSLOD=2.4709;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:20,4:22:8.97:82,9,0	1/1:12,0:11:5.82:43,6,0	0/0:26,0:3:9.02:0,9,116	0/0:32,0:4:6.38:0,6,48	0/0:20,0:20:2.33:0,2,24	1/1:22,3:24:8.65:101,9,0	1/1:26,2:25:11.20:158,11,0	0/1:14,0:10:22.46:64,0,22	0/1:16,1:15:15.72:100,0,16	0/1:17,0:13:3.83:177,0,4	1/1:12,1:13:0.89:2,1,0	1/1:23,3:23:7.64:197,8,0	0/1:16,2:18:51.50:89,0,51	1/1:19,2:18:2.47:142,2,0	0/0:9,0:8:20.95:0,21,272	0/1:14,1:13:26.71:30,0,27	0/1:18,2:18:16.01:104,0,16	1/1:14,1:14:13.06:141,13,0	0/1:7,0:5:14:52,0,14	0/1:11,0:11:0.22:0,0,0	./.	1/1:18,2:20:15.85:148,16,0	1/1:12,2:13:9.02:96,9,0	1/1:15,4:17:12.98:148,13,0	1/1:27,4:27:12.08:153,12,0	1/1:22,2:21:3.74:313,4,0	1/1:17,0:15:2.63:33,3,0	0/1:6,0:6:2.48:32,0,2
chr10	32321569	.	T	TTAGC	32347.51	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-4.173;DP=558;FS=0.520;HRun=0;HaplotypeScore=94.4343;InbreedingCoeff=0.9953;MQ=75.93;MQ0=0;MQRankSum=-9.829;QD=65.61;ReadPosRankSum=5.003;VQSLOD=7.1064;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,26:31:58.38:1650,58,0	1/1:2,8:10:24.08:670,24,0	0/0:24,0:24:59.36:0,59,1135	0/0:26,0:26:51.28:0,51,1085	1/1:3,18:21:51.18:1381,51,0	1/1:1,14:16:45.15:1236,45,0	1/1:1,17:19:45.15:1231,45,0	1/1:5,23:31:87.23:2078,87,0	1/1:1,15:16:42.14:1168,42,0	1/1:3,18:21:63.22:1637,63,0	1/1:1,11:14:24:579,24,0	1/1:4,23:29:60.20:1670,60,0	1/1:2,17:21:57.20:1580,57,0	1/1:2,17:20:45.15:1252,45,0	0/0:15,0:15:45.13:0,45,828	1/1:4,27:30:78.27:2171,78,0	1/1:2,31:33:84.29:2322,84,0	1/1:0,10:11:21.07:587,21,0	1/1:4,13:19:57.09:1302,57,0	1/1:1,19:20:48.09:1246,48,0	1/1:1,18:20:47.76:1337,48,0	1/1:1,11:12:30.10:835,30,0	1/1:4,13:17:39.13:1083,39,0	1/1:1,21:23:54.18:1507,54,0	1/1:0,15:15:36.12:998,36,0	1/1:0,12:15:42.09:994,42,0	1/1:2,15:21:45.15:1248,45,0	1/1:0,7:7:21.07:587,21,0
chr10	32325311	.	A	AC	22477.29	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-9.296;DP=637;FS=6.709;HRun=2;HaplotypeScore=56.9973;InbreedingCoeff=0.9955;MQ=80.07;MQ0=0;MQRankSum=-6.026;QD=38.49;ReadPosRankSum=3.655;VQSLOD=5.3541;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,37:37:87.29:1252,87,0	1/1:0,16:16:42.14:604,42,0	0/0:15,0:16:36.62:0,37,404	0/0:13,0:14:20.97:0,21,324	1/1:0,31:31:90.30:1293,90,0	1/1:1,24:25:66.22:950,66,0	1/1:0,23:23:63.21:907,63,0	1/1:6,33:39:99:1401,99,0	1/1:1,21:23:66.22:942,66,0	1/1:2,38:40:99:1622,114,0	1/1:0,24:24:69.23:993,69,0	1/1:0,19:19:42.14:605,42,0	1/1:0,25:25:72.24:1037,72,0	1/1:0,19:19:48.16:691,48,0	0/0:23,0:23:69.20:0,69,840	1/1:1,25:26:72.24:1037,72,0	1/1:1,22:23:60.20:864,60,0	1/1:1,12:13:36.12:518,36,0	1/1:1,18:19:51.17:733,51,0	1/1:0,15:15:39.09:538,39,0	1/1:1,27:28:75.25:1079,75,0	1/1:0,13:13:36.12:518,36,0	1/1:1,18:19:42.14:605,42,0	1/1:1,20:21:60.20:864,60,0	1/1:0,27:27:75.25:1080,75,0	1/1:0,31:31:93.29:1314,93,0	1/1:0,20:21:54.02:771,54,0	1/1:0,7:7:18.06:259,18,0
chr10	32327610	.	A	ATCT	22662.71	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=1.214;DP=702;FS=5.675;HRun=0;HaplotypeScore=107.8768;InbreedingCoeff=0.9969;MQ=81.30;MQ0=0;MQRankSum=-2.092;QD=46.82;ReadPosRankSum=3.275;VQSLOD=6.6265;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,30:35:69.24:1472,69,0	1/1:2,7:9:15.05:320,15,0	0/0:22,0:21:54:0,54,738	0/0:22,0:22:39.55:0,40,545	1/1:5,19:24:51.13:1041,51,0	1/1:6,28:34:78.27:1663,78,0	1/1:3,25:28:75.26:1588,75,0	0/0:38,0:38:90.29:0,90,1338	1/1:2,15:18:42.14:896,42,0	1/1:5,17:22:51.17:1051,51,0	1/1:4,17:21:45.15:960,45,0	1/1:3,23:26:63.22:1344,63,0	1/1:7,23:32:66.15:1314,66,0	1/1:8,19:28:54.19:1151,54,0	0/0:33,0:33:75.24:0,75,1129	1/1:1,31:32:90.31:1920,90,0	1/1:4,15:21:39.13:831,39,0	1/1:5,18:23:54.19:1152,54,0	0/0:14,0:14:36.12:0,36,552	0/0:34,0:34:93.32:0,93,1419	0/0:28,0:28:78.25:0,78,1166	1/1:3,15:19:33.11:704,33,0	1/1:4,21:25:54.19:1151,54,0	1/1:4,23:27:54.18:1151,54,0	1/1:2,15:18:39.13:832,39,0	1/1:2,28:30:81.22:1608,81,0	0/0:27,0:27:69.23:0,69,1057	1/1:1,9:12:24.08:512,24,0
chr10	32328114	.	C	CATATACATATGT	12992.20	PASS	AB=0.681;AC=34;AF=0.630;AN=54;BaseQRankSum=3.372;DP=547;FS=16.143;HRun=0;HaplotypeScore=234.6757;InbreedingCoeff=0.6718;MQ=58.23;MQ0=6;MQRankSum=-11.965;QD=40.86;ReadPosRankSum=2.076;VQSLOD=3.0871;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,14:26:6.02:366,6,0	1/1:7,3:9:3.01:183,3,0	0/0:38,0:21:48:0,48,1134	0/0:47,0:33:52.33:0,52,2088	0/1:9,13:22:0:0,0,0	1/1:11,6:17:2.50:92,2,0	1/1:14,6:19:14.35:656,14,0	0/0:32,0:31:87.25:0,87,2745	1/1:6,7:13:12.04:713,12,0	1/1:17,7:24:66.22:3066,66,0	./.	1/1:4,11:15:12.04:733,12,0	1/1:6,6:13:11.44:730,11,0	1/1:7,5:13:2.61:183,3,0	0/0:11,0:11:21.07:0,21,703	1/1:8,13:22:3.01:183,3,0	1/1:4,10:15:23.92:1331,24,0	0/1:6,5:11:4.18:1001,0,4	0/0:21,0:21:53.82:0,54,1950	0/0:18,0:18:51.18:0,51,1868	0/0:30,0:30:70.11:0,70,2400	0/1:8,7:16:0.06:0,0,0	1/1:6,8:14:3.01:130,3,0	1/1:7,11:18:0.14:0,0,0	0/1:12,6:18:0:0,0,0	1/1:13,7:22:57.20:3073,57,0	0/0:16,0:16:48.15:0,48,1695	1/1:2,5:6:9.03:550,9,0
chr10	32328245	.	TTC	T	603.11	PASS	AB=0.981;AC=31;AF=0.674;AN=46;BaseQRankSum=1.956;DP=476;FS=11.696;HRun=0;HaplotypeScore=75.5863;InbreedingCoeff=0.2868;MQ=64.27;MQ0=20;MQRankSum=-0.760;QD=2.53;ReadPosRankSum=2.753;VQSLOD=0.4627;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	1/1:6,1:7:6:56,6,0	./.	0/0:71,0:30:4.76:0,5,28	0/1:13,0:13:5.11:5,0,7	1/1:16,1:17:8.69:50,9,0	1/1:21,0:21:5.75:38,6,0	0/0:28,0:28:27.04:0,27,344	1/1:12,0:11:9.02:95,9,0	1/1:15,0:14:3.01:33,3,0	./.	./.	./.	1/1:8,0:8:9.01:89,9,0	0/0:16,0:16:28.77:0,29,312	1/1:8,0:8:3.01:31,3,0	1/1:14,1:13:3.01:32,3,0	1/1:5,1:5:9.02:97,9,0	0/0:28,0:25:44.54:0,45,444	0/0:19,0:18:9.03:0,9,136	0/1:14,0:8:20.85:21,0,107	1/1:9,0:9:2.37:8,2,0	1/1:12,0:12:2.96:33,3,0	1/1:10,7:17:3.01:32,3,0	1/1:9,1:8:1.06:3,1,0	0/1:20,0:19:2.04:77,0,2	0/1:15,0:15:28.93:29,0,127	0/1:17,2:16:21.54:22,0,25
chr10	32328270	.	TCTCC	T	1244.10	PASS	AB=1.000;AC=36;AF=0.692;AN=52;BaseQRankSum=1.272;DP=375;FS=9.950;HRun=0;HaplotypeScore=63.4287;InbreedingCoeff=0.4271;MQ=42.27;MQ0=75;MQRankSum=0.695;QD=5.21;ReadPosRankSum=1.009;VQSLOD=0.6595;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:16,0:11:0.15:0,0,0	1/1:5,1:6:6.08:100,6,0	./.	0/0:24,0:5:2.80:0,3,20	1/1:8,0:8:5.60:44,6,0	1/1:14,1:11:5.53:112,6,0	1/1:20,0:18:6.01:83,6,0	0/0:25,0:22:56.89:0,57,717	1/1:10,0:7:8.81:167,9,0	1/1:5,4:5:5.61:64,6,0	0/1:12,0:9:0:0,0,0	1/1:5,3:5:2.94:18,3,0	./.	1/1:9,1:7:9.01:137,9,0	0/0:16,0:14:28.73:0,29,486	1/1:2,5:5:3.01:50,3,0	1/1:18,1:9:5.88:71,6,0	1/1:5,0:4:9.03:154,9,0	0/0:27,0:22:57.19:0,57,759	0/0:17,0:16:8.73:0,9,215	0/0:16,0:7:3.33:0,3,164	1/1:9,3:12:2.97:38,3,0	1/1:11,2:12:4.32:59,4,0	1/1:14,0:9:3.01:56,3,0	1/1:13,0:7:0.38:1,0,0	1/1:6,2:6:14.57:183,15,0	0/1:16,0:13:13.27:13,0,208	0/1:15,0:5:20.16:51,0,20
chr10	32328271	.	CTCCCCTCT	C	1404.96	PASS	AB=0.933;AC=37;AF=0.712;AN=52;BaseQRankSum=2.243;DP=360;FS=9.669;HRun=0;HaplotypeScore=72.0638;InbreedingCoeff=0.3347;MQ=41.74;MQ0=79;MQRankSum=-0.175;QD=5.45;ReadPosRankSum=1.154;VQSLOD=0.6660;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:15,0:10:0.16:0,0,0	1/1:5,0:5:6.91:101,7,0	./.	0/0:23,0:5:2.84:0,3,35	1/1:8,0:8:5.60:43,6,0	1/1:17,0:11:13.12:173,13,0	1/1:19,0:16:5.88:83,6,0	0/0:27,0:23:59.82:0,60,734	1/1:10,0:7:6.20:162,6,0	1/1:10,0:5:4.04:61,4,0	0/1:5,5:7:0:0,0,0	1/1:8,0:5:3.01:39,3,0	./.	1/1:9,0:5:9.02:137,9,0	0/0:16,0:14:28.74:0,29,498	1/1:7,0:5:3.01:50,3,0	1/1:19,0:9:5.88:71,6,0	1/1:5,0:4:9.03:154,9,0	0/1:27,0:23:11.20:11,0,643	0/0:13,0:12:8.70:0,9,215	0/0:15,0:7:3.33:0,3,165	1/1:11,0:11:3.01:34,3,0	1/1:14,0:12:4.32:59,4,0	1/1:14,0:9:3.01:56,3,0	1/1:12,0:6:0.37:1,0,0	1/1:7,0:5:14.57:224,15,0	0/1:16,0:13:46.57:47,0,208	0/1:15,0:4:21.96:47,0,22
chr10	32328273	.	CCCCTCT	C	600.78	PASS	AB=0.974;AC=35;AF=0.700;AN=50;BaseQRankSum=5.134;DP=335;FS=5.495;HRun=0;HaplotypeScore=60.6559;InbreedingCoeff=0.3723;MQ=38.06;MQ0=84;MQRankSum=-0.290;QD=2.74;ReadPosRankSum=1.551;VQSLOD=0.9939;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:11,1:6:0.13:0,0,0	1/1:5,0:5:6.61:36,7,0	./.	0/0:19,0:4:2.82:0,3,23	1/1:6,2:8:3.35:17,3,0	1/1:17,0:11:12.73:101,13,0	1/1:9,8:14:1.89:6,2,0	0/0:28,0:24:61.74:0,62,421	1/1:9,0:6:8.61:64,9,0	1/1:11,0:5:4.37:37,4,0	./.	1/1:8,0:5:3.01:39,3,0	./.	1/1:7,0:3:5.95:43,6,0	0/0:16,0:14:17.68:0,18,141	1/1:7,0:5:2.94:18,3,0	1/1:15,0:6:5.85:36,6,0	1/1:6,0:5:9.23:54,9,0	0/1:26,0:21:64.46:64,0,194	0/0:11,0:10:8.70:0,9,80	0/0:15,0:7:4.12:0,4,65	1/1:5,5:10:2.95:21,3,0	1/1:10,1:9:4.34:24,4,0	1/1:15,0:9:2.98:21,3,0	0/0:12,0:5:2.72:0,3,13	1/1:8,0:5:11.88:112,12,0	0/1:12,0:9:28:33,0,28	1/1:15,0:4:2.71:22,3,0
chr10	32328275	.	CCTCTCT	C	316.56	PASS	AB=0.977;AC=18;AF=0.474;AN=38;BaseQRankSum=-1.401;DP=324;FS=3.282;HRun=0;HaplotypeScore=56.6416;InbreedingCoeff=0.3606;MQ=36.56;MQ0=86;MQRankSum=-0.156;QD=2.28;ReadPosRankSum=-0.311;VQSLOD=1.4096;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:6:0:0,0,0	0/0:5,0:5:0:0,0,0	./.	./.	0/1:9,0:8:0.21:0,0,0	1/1:14,1:10:5.71:76,6,0	0/0:15,0:12:0:0,0,0	1/1:28,0:23:1.81:5,2,0	0/0:9,0:6:0:0,0,0	0/0:11,0:5:2.04:0,2,6	./.	1/1:8,0:5:3.01:36,3,0	./.	./.	0/0:14,0:12:0.41:0,0,1	./.	0/0:18,0:6:3:0,3,27	0/0:7,0:6:3.01:0,3,41	1/1:18,3:16:12.04:191,12,0	0/1:9,0:9:0.10:0,0,0	./.	0/1:10,0:10:0.03:0,0,0	1/1:8,2:8:1.36:3,1,0	./.	0/1:11,0:4:0:0,0,0	1/1:7,0:5:3.01:34,3,0	1/1:7,1:6:3.01:60,3,0	./.
chr10	32328319	.	TCTTTCG	T	675.57	PASS	AB=0.967;AC=19;AF=0.380;AN=50;BaseQRankSum=2.448;DP=328;FS=13.594;HRun=0;HaplotypeScore=73.4078;InbreedingCoeff=-0.0314;MQ=32.01;MQ0=42;MQRankSum=1.373;QD=4.07;ReadPosRankSum=2.992;VQSLOD=-0.3002;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:11:3.47:58,3,0	0/1:5,0:5:2.69:19,0,3	0/0:29,0:3:9.02:0,9,137	./.	0/1:19,0:16:3.77:57,0,4	0/1:16,0:12:52.59:60,0,53	0/0:17,0:16:0.60:0,1,96	0/0:19,0:16:27.97:0,28,622	./.	0/1:10,0:9:44.18:44,0,108	1/1:7,0:7:5.75:40,6,0	1/1:2,1:2:3.01:67,3,0	0/0:5,0:3:0:0,0,0	0/0:8,0:6:5.55:0,6,19	0/0:8,0:6:9.83:0,10,146	./.	0/0:12,0:7:11.23:0,11,103	0/0:5,0:5:3.01:0,3,40	0/1:17,0:15:99:185,0,233	0/1:6,8:14:1.40:1,0,41	0/1:13,0:7:0.95:35,0,1	1/1:13,0:12:4.84:81,5,0	0/0:14,0:14:6.48:0,6,61	0/1:13,0:9:12.22:19,0,12	0/1:7,0:5:19.11:19,0,26	0/1:9,0:8:75.05:100,0,75	0/1:6,0:5:18.26:31,0,18	0/0:6,0:2:3.01:0,3,37
chr10	32328325	.	G	GGTGT	869.90	PASS	AB=1.000;AC=26;AF=0.481;AN=54;BaseQRankSum=3.948;DP=351;FS=32.017;HRun=0;HaplotypeScore=78.9091;InbreedingCoeff=0.1398;MQ=35.79;MQ0=31;MQRankSum=2.559;QD=4.44;ReadPosRankSum=-2.409;VQSLOD=-0.0439;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:15,0:13:16.24:53,0,16	1/1:1,2:6:2.99:28,3,0	0/0:30,0:3:9:0,9,140	./.	1/1:18,0:16:4.30:48,4,0	0/1:20,0:16:34.06:41,0,34	0/1:17,0:18:37.29:54,0,37	0/0:16,0:14:38.78:0,39,633	1/1:1,0:2:2.99:23,3,0	0/1:13,0:12:66.83:67,0,102	1/1:8,0:8:11.93:119,12,0	0/0:5,0:3:1.55:0,2,4	1/1:4,0:4:3:26,3,0	1/1:6,0:6:5.95:51,6,0	0/0:9,0:6:9.50:0,9,157	0/0:2,0:2:3:0,3,25	0/1:12,0:9:20.50:67,0,21	0/0:3,0:4:2.74:0,3,12	0/0:16,0:14:19.27:0,19,365	0/0:14,0:14:8.96:0,9,130	0/0:13,0:8:2.80:0,3,33	1/1:16,0:15:8.91:86,9,0	1/1:14,0:14:3.98:12,4,0	1/1:13,0:12:8.96:94,9,0	0/1:8,0:8:9.42:62,0,9	0/1:13,0:12:71.84:131,0,72	0/0:8,0:7:15.25:0,15,97	0/1:8,0:5:32.85:74,0,33
chr10	32328326	.	C	CTGTGTG	3642.61	PASS	AB=0.852;AC=39;AF=0.780;AN=50;BaseQRankSum=-3.680;DP=378;FS=7.245;HRun=0;HaplotypeScore=83.4949;InbreedingCoeff=0.3466;MQ=36.27;MQ0=33;MQRankSum=-0.495;QD=13.75;ReadPosRankSum=1.453;VQSLOD=1.0890;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,7:15:4.53:281,5,0	1/1:6,0:7:6.01:91,6,0	./.	./.	1/1:18,0:16:3.18:101,3,0	1/1:10,8:19:12.51:256,13,0	1/1:18,2:21:10.50:194,11,0	1/1:17,0:15:3:21,3,0	1/1:2,0:4:3.01:38,3,0	1/1:13,0:12:20.91:240,21,0	1/1:8,0:8:12.02:293,12,0	./.	1/1:2,4:7:6.02:137,6,0	1/1:6,1:7:5.84:187,6,0	0/0:7,0:5:6.01:0,6,89	0/0:1,0:2:0.89:0,1,2	1/1:12,2:12:15.02:297,15,0	1/1:5,0:5:9:169,9,0	0/1:19,0:17:43.14:88,0,43	0/0:14,0:14:6.49:0,6,108	0/0:12,0:8:2.72:0,3,23	1/1:15,0:14:10.61:239,11,0	0/1:7,0:14:0.06:0,0,1	1/1:15,1:14:11.70:253,12,0	1/1:8,0:8:11.14:186,11,0	1/1:11,1:12:26.95:432,27,0	0/1:7,0:7:14.74:15,0,24	1/1:8,0:5:6.02:125,6,0
chr10	32328338	.	G	GTGTGTG	3074.06	PASS	AB=1.000;AC=41;AF=0.759;AN=54;BaseQRankSum=-3.716;DP=416;FS=4.663;HRun=0;HaplotypeScore=79.8263;InbreedingCoeff=0.3216;MQ=42.04;MQ0=37;MQRankSum=-1.355;QD=8.26;ReadPosRankSum=0.456;VQSLOD=1.6831;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:16:4.52:281,5,0	1/1:7,0:7:3:27,3,0	0/1:34,0:5:0:0,0,0	0/1:45,0:3:0:0,0,0	1/1:21,0:20:3.18:101,3,0	1/1:24,0:20:9.50:160,10,0	1/1:24,0:23:10.50:194,11,0	1/1:20,0:18:4.32:23,4,0	1/1:7,0:7:3.01:38,3,0	1/1:18,0:17:20.91:240,21,0	1/1:8,0:8:12.02:293,12,0	./.	1/1:8,0:8:3.01:85,3,0	1/1:5,4:10:5.84:187,6,0	0/0:8,0:6:6.01:0,6,89	0/0:4,0:3:0.89:0,1,2	1/1:16,0:11:15.03:297,15,0	1/1:6,0:6:2.98:22,3,0	0/1:17,0:15:43.85:82,0,44	0/0:15,0:15:6.02:0,6,107	0/0:10,0:7:2.72:0,3,23	1/1:15,0:14:10.72:239,11,0	0/1:15,0:15:0.06:0,0,1	1/1:19,0:16:8.50:173,9,0	1/1:8,0:8:11.94:188,12,0	1/1:14,0:14:26.95:432,27,0	0/1:10,0:9:15.62:16,0,23	1/1:8,0:5:6.02:125,6,0
chr10	32328419	.	CT	C	663.15	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=4.055;DP=380;FS=0.672;HRun=10;HaplotypeScore=46.3400;InbreedingCoeff=0.8644;MQ=58.59;MQ0=1;MQRankSum=1.099;QD=20.10;ReadPosRankSum=-0.075;VQSLOD=4.0654;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:58.39:0,58,626	0/0:9,0:9:21.02:0,21,213	0/0:8,0:8:14.96:0,15,141	0/0:7,0:6:5.98:0,6,108	0/0:21,0:21:12.69:0,13,535	0/0:11,0:11:30.07:0,30,323	0/0:14,0:14:35.96:0,36,379	0/0:31,0:32:66.16:0,66,721	0/0:9,0:9:18.05:0,18,199	0/0:19,0:18:51:0,51,528	0/0:14,0:14:39.10:0,39,424	0/0:10,0:10:21.06:0,21,232	0/0:9,0:9:24.06:0,24,266	0/0:13,0:13:27.07:0,27,299	0/0:8,0:8:24.06:0,24,266	0/0:7,0:7:21.06:0,21,232	0/0:18,0:19:44.15:0,44,506	0/0:11,0:11:30.08:0,30,332	0/0:20,0:20:51.13:0,51,556	0/0:11,0:11:30.08:0,30,332	0/0:10,0:10:15.51:0,16,167	0/0:7,0:7:9.02:0,9,100	0/0:8,0:8:21.02:0,21,219	0/0:15,1:16:13.01:0,13,352	0/0:12,0:12:30.08:0,30,332	1/1:1,24:25:74.99:651,75,0	0/0:20,0:20:54.12:0,54,580	1/1:3,5:8:15:130,15,0
chr10	32328655	.	A	AAC	1295.80	PASS	AB=0.898;AC=32;AF=0.640;AN=50;BaseQRankSum=-2.549;DP=497;FS=0.000;HRun=0;HaplotypeScore=85.3472;InbreedingCoeff=-0.0180;MQ=61.84;MQ0=14;MQRankSum=0.081;QD=3.76;ReadPosRankSum=-2.611;VQSLOD=1.7994;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:38:3.54:0,4,141	1/1:6,1:7:2.87:44,3,0	./.	./.	1/1:15,10:25:5.79:86,6,0	1/1:26,3:29:11.67:159,12,0	0/1:21,6:27:35.70:36,0,37	./.	1/1:9,0:8:2.99:24,3,0	1/1:7,0:7:5.91:46,6,0	1/1:5,2:7:3.01:44,3,0	1/1:11,1:12:3.01:44,3,0	1/1:15,3:18:2.16:43,2,0	1/1:16,0:16:5.83:39,6,0	0/0:12,0:19:17.04:0,17,84	0/1:12,5:17:67.46:67,0,117	0/1:25,0:24:42.30:154,0,42	0/0:7,0:7:6.02:0,6,64	1/1:8,0:10:5.80:31,6,0	0/1:9,0:8:0:0,0,0	0/0:12,0:14:8.44:0,8,41	0/1:7,0:7:0:0,0,0	0/1:8,0:10:20.77:21,0,21	0/1:22,11:34:49.02:117,0,49	0/1:21,3:25:49.18:180,0,49	0/1:25,0:25:99:138,0,99	1/1:13,5:20:2.92:127,3,0	0/1:2,1:2:21.19:38,0,21
chr10	32330629	.	TAC	T	8745.57	PASS	AB=0.766;AC=41;AF=0.732;AN=56;BaseQRankSum=8.530;DP=798;FS=16.280;HRun=0;HaplotypeScore=107.5577;InbreedingCoeff=0.6235;MQ=60.64;MQ0=18;MQRankSum=2.286;QD=14.43;ReadPosRankSum=6.504;VQSLOD=3.5205;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:21,26:46:41.95:604,42,0	1/1:1,6:7:9.03:104,9,0	0/0:31,0:13:3.01:0,3,47	0/0:36,0:23:1.55:0,2,4	1/1:10,19:29:36.07:404,36,0	0/1:10,27:36:20.03:567,0,20	1/1:14,18:32:24.07:278,24,0	0/1:30,7:37:89.28:89,0,384	1/1:3,13:15:18.05:209,18,0	1/1:13,25:37:64.83:795,65,0	1/1:6,15:21:36.05:392,36,0	1/1:5,24:31:59.58:631,60,0	1/1:10,18:29:44.80:481,45,0	1/1:10,22:31:60.17:689,60,0	0/0:23,1:24:17.91:0,18,709	1/1:7,32:40:59.99:676,60,0	1/1:9,18:28:35.61:438,36,0	1/1:12,14:26:11.33:235,11,0	0/0:13,0:13:23.20:0,23,238	0/0:30,1:32:31.35:0,31,838	0/0:55,1:55:82.53:0,83,1629	1/1:10,9:19:20.89:222,21,0	1/1:5,16:23:32.66:339,33,0	1/1:5,18:25:41.79:446,42,0	1/1:7,19:26:45.13:522,45,0	1/1:6,16:21:44.34:489,44,0	0/1:25,4:29:32.20:32,0,868	1/1:3,5:8:9.03:104,9,0
chr10	32332015	.	ATAGATAGG	A	1673.02	PASS	AB=1.000;AC=18;AF=0.321;AN=56;BaseQRankSum=-7.360;DP=549;FS=13.789;HRun=0;HaplotypeScore=176.2716;InbreedingCoeff=-0.3159;MQ=66.81;MQ0=0;MQRankSum=-0.892;QD=4.92;ReadPosRankSum=6.449;VQSLOD=1.1361;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:21:99:142,0,392	0/1:14,0:14:80.84:81,0,834	0/0:22,0:17:16.41:0,16,242	0/0:20,0:16:17.12:0,17,206	0/1:21,0:21:57.80:58,0,1254	0/1:20,0:20:70.78:71,0,927	0/1:21,0:21:43.83:206,0,44	0/0:30,0:30:72.01:0,72,646	0/1:16,0:16:95.99:96,0,844	0/0:21,0:21:26.02:0,26,1118	0/1:18,0:18:97.81:98,0,951	0/0:15,0:15:41.41:0,41,1238	0/1:17,0:17:44.84:45,0,616	0/1:18,0:18:77.05:77,0,711	0/0:29,0:28:68.02:0,68,1990	1/1:3,11:14:12.04:315,12,0	0/1:20,0:20:38.99:39,0,889	0/1:13,0:13:8.49:8,0,47	0/0:19,0:19:48.01:0,48,863	0/0:18,0:18:41.83:0,42,1130	0/0:11,0:11:13.81:0,14,190	0/1:17,0:17:99:130,0,654	0/1:26,0:26:27.02:27,0,955	0/1:20,0:20:51.37:51,0,872	0/1:34,0:34:99:145,0,1316	0/1:28,0:28:99:250,0,1018	0/0:17,0:17:31.91:0,32,563	0/0:6,0:6:18.06:0,18,590
chr10	32332027	.	ATAGG	A	2470.37	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=-6.415;DP=561;FS=5.005;HRun=0;HaplotypeScore=136.4108;InbreedingCoeff=-0.2815;MQ=61.91;MQ0=0;MQRankSum=-0.733;QD=6.35;ReadPosRankSum=-2.794;VQSLOD=2.0562;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:22:81.94:192,0,82	0/1:14,0:14:80.84:81,0,363	0/0:17,0:13:16.50:0,16,242	0/0:9,0:8:17.12:0,17,206	0/1:24,0:24:99:130,0,551	0/1:19,0:19:90.95:91,0,296	1/1:22,0:22:28.32:320,28,0	0/0:38,0:38:69.18:0,69,731	0/1:17,0:17:99:153,0,360	0/1:22,0:21:56.28:56,0,319	0/1:18,0:18:99:120,0,419	0/1:19,0:19:1.03:1,0,554	0/1:21,0:21:99:124,0,135	0/1:20,0:20:99:172,0,205	0/0:33,0:32:83.05:0,83,1605	0/1:13,0:13:32.32:114,0,32	0/1:18,0:18:68.84:69,0,364	1/1:4,10:14:15.03:233,15,0	0/0:19,0:19:53.92:0,54,653	0/0:20,0:20:18.97:0,19,644	0/0:10,0:10:13.81:0,14,135	0/1:18,0:18:99:173,0,275	0/1:22,0:22:48.93:49,0,305	0/1:21,0:21:70.61:71,0,269	0/1:32,0:32:99:148,0,401	0/1:31,0:31:99:345,0,397	0/0:19,0:19:31.91:0,32,425	0/0:7,0:7:17.52:0,18,276
chr10	32332030	.	G	GATA	2930.28	PASS	AB=0.827;AC=10;AF=0.179;AN=56;BaseQRankSum=11.545;DP=563;FS=0.000;HRun=0;HaplotypeScore=127.2790;InbreedingCoeff=-0.2153;MQ=59.68;MQ0=0;MQRankSum=1.061;QD=12.36;ReadPosRankSum=2.290;VQSLOD=3.0717;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:23,3:24:93.64:94,0,224	0/0:15,0:15:44.83:0,45,351	0/0:14,0:10:30.10:0,30,526	0/0:9,0:8:24.05:0,24,390	0/0:24,0:24:46.83:0,47,527	0/1:14,5:19:54.43:469,0,54	0/1:22,0:22:0.01:0,0,190	0/0:37,0:37:99:0,111,1690	0/0:18,0:18:24.81:0,25,340	0/1:17,6:22:99:420,0,135	0/0:18,0:18:53.78:0,54,423	0/0:20,0:20:56.82:0,57,467	0/1:18,3:21:99:144,0,211	0/1:15,5:20:99:273,0,154	0/0:32,0:31:93.27:0,93,1634	0/0:12,0:12:14.94:0,15,133	0/0:18,0:18:47.88:0,48,395	0/0:12,0:12:14.81:0,15,103	0/0:20,0:20:54.85:0,55,858	0/0:20,0:20:29.97:0,30,435	0/0:11,0:11:13.60:0,14,221	0/0:18,0:18:3.81:0,4,317	0/1:11,10:21:72.14:497,0,72	0/1:13,8:21:73.89:412,0,74	0/1:25,8:33:99:660,0,181	0/1:28,2:31:99:102,0,422	0/0:21,0:21:22.68:0,23,505	0/0:7,0:7:20.98:0,21,179
chr10	32332031	.	G	GA	862.57	PASS	AB=0.808;AC=9;AF=0.161;AN=56;BaseQRankSum=10.316;DP=568;FS=11.578;HRun=0;HaplotypeScore=116.2940;InbreedingCoeff=-0.1951;MQ=58.81;MQ0=0;MQRankSum=-0.810;QD=4.01;ReadPosRankSum=3.725;VQSLOD=2.3481;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:24:19.03:19,0,159	0/0:15,0:15:39.62:0,40,196	0/0:14,0:10:30.09:0,30,396	0/0:8,0:7:21.03:0,21,271	0/0:23,0:23:65.78:0,66,335	0/1:13,5:18:39.43:142,0,39	0/0:21,0:21:45.48:0,45,230	0/0:36,0:36:65.93:0,66,1230	0/0:18,0:18:24.50:0,25,204	0/1:17,6:22:45.15:169,0,45	0/0:18,0:18:51.40:0,51,262	0/0:20,0:20:36.12:0,36,257	0/1:18,0:21:13.92:14,0,184	0/1:15,5:20:85.27:85,0,109	0/0:33,0:32:90.30:0,90,1245	0/0:13,0:13:13.40:0,13,82	0/0:18,0:18:46.01:0,46,248	0/0:13,0:13:11.12:0,11,54	0/0:21,0:21:48.80:0,49,636	0/0:11,1:22:31.11:0,31,315	0/0:6,0:11:12.04:0,12,166	0/0:18,0:18:51.27:0,51,255	0/1:12,10:22:32.52:185,0,33	0/1:13,8:21:55.44:126,0,55	0/1:25,8:33:83.56:228,0,84	0/1:28,2:31:35.15:35,0,227	0/0:9,0:24:28.03:0,28,367	0/0:7,0:7:20.13:0,20,106
chr10	32342381	.	CT	C	7435.14	PASS	AB=0.778;AC=41;AF=0.732;AN=56;BaseQRankSum=-9.528;DP=575;FS=1.192;HRun=11;HaplotypeScore=75.1845;InbreedingCoeff=0.7719;MQ=72.34;MQ0=0;MQRankSum=-0.168;QD=17.62;ReadPosRankSum=6.096;VQSLOD=5.4163;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,12:14:38.55:305,39,0	1/1:1,9:10:26.97:222,27,0	0/1:19,1:19:1.52:2,0,199	0/1:7,2:9:25.08:62,0,25	1/1:7,29:36:64.33:660,64,0	1/1:1,28:29:68.92:567,69,0	0/1:2,6:9:8.97:131,0,9	0/0:10,0:35:80.51:0,81,474	1/1:3,19:22:44.93:369,45,0	1/1:3,23:26:68.85:557,69,0	1/1:5,20:25:53.64:424,54,0	1/1:4,22:26:62.92:517,63,0	1/1:2,21:23:41.94:345,42,0	1/1:0,10:10:20.96:172,21,0	0/0:15,0:15:45.08:0,45,460	1/1:1,13:15:32:252,32,0	1/1:3,20:23:53.93:443,54,0	1/1:1,6:7:11.98:99,12,0	0/0:6,0:22:54.83:0,55,312	0/0:6,0:34:77.29:0,77,420	0/0:1,0:20:39.87:0,40,200	1/1:2,19:21:50.91:419,51,0	1/1:0,17:17:44.94:369,45,0	1/1:1,10:12:33.82:257,34,0	1/1:5,18:23:50.65:406,51,0	1/1:4,28:32:54.59:636,55,0	0/0:4,0:27:62.86:0,63,328	1/1:3,10:13:26.97:222,27,0
chr10	32343706	.	C	CA	11032.23	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-7.748;DP=386;FS=2.619;HRun=6;HaplotypeScore=34.0669;InbreedingCoeff=0.9660;MQ=87.13;MQ0=0;MQRankSum=-4.075;QD=32.35;ReadPosRankSum=0.580;VQSLOD=4.7081;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,8:9:24.07:302,24,0	1/1:0,5:5:15.05:189,15,0	0/0:15,0:15:27.05:0,27,268	0/0:13,0:13:18.01:0,18,179	1/1:2,15:17:45.14:566,45,0	1/1:4,14:18:39.12:491,39,0	1/1:1,8:9:24.08:302,24,0	1/1:6,21:27:63.17:765,63,0	1/1:2,10:12:30.10:377,30,0	1/1:1,9:10:27.09:340,27,0	1/1:1,13:14:39.12:491,39,0	1/1:1,10:11:30.10:377,30,0	1/1:0,15:15:45.14:566,45,0	1/1:4,18:22:54.13:662,54,0	0/0:17,0:17:48.11:0,48,490	1/1:1,10:11:24.08:302,24,0	1/1:0,13:13:33.11:415,33,0	1/1:0,6:6:15.05:189,15,0	1/1:4,17:21:51.16:642,51,0	1/1:1,14:15:42.13:528,42,0	1/1:0,5:5:12.04:151,12,0	1/1:0,9:9:27.09:340,27,0	1/1:1,14:15:39.12:490,39,0	1/1:0,6:6:15.05:189,15,0	1/1:1,20:21:57.18:717,57,0	1/1:1,17:18:51.16:641,51,0	1/1:3,15:18:45.11:549,45,0	1/1:2,12:14:36.12:453,36,0
chr10	32343807	.	AC	A	5848.41	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-4.552;DP=353;FS=55.966;HRun=7;HaplotypeScore=54.1878;InbreedingCoeff=0.9446;MQ=78.63;MQ0=2;MQRankSum=-2.973;QD=25.54;ReadPosRankSum=5.626;VQSLOD=0.9491;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,7:8:11.15:119,11,0	1/1:0,4:4:12.03:121,12,0	0/0:30,0:27:72.64:0,73,823	0/0:12,0:9:24.07:0,24,293	1/1:1,14:15:42.09:427,42,0	1/1:1,13:14:39.08:394,39,0	1/1:0,6:6:18.04:184,18,0	0/0:21,0:21:25.93:0,26,419	1/1:3,4:7:15.03:153,15,0	1/1:1,11:12:36.08:365,36,0	1/1:3,16:19:48.10:488,48,0	1/1:1,5:6:15.03:153,15,0	1/1:0,12:12:33.08:336,33,0	1/1:4,6:10:18.04:183,18,0	0/0:9,0:9:18.06:0,18,226	1/1:1,7:8:20.65:214,21,0	1/1:4,16:20:45.06:449,45,0	1/1:1,12:12:27.06:276,27,0	0/0:16,0:16:42.10:0,42,485	0/0:10,0:10:3.06:0,3,168	0/0:13,0:13:33:0,33,401	1/1:1,11:12:30.07:306,30,0	1/1:1,7:8:21.04:214,21,0	1/1:1,18:19:48.11:489,48,0	1/1:1,14:15:39.08:397,39,0	1/1:2,12:14:39.09:397,39,0	0/0:13,0:13:17.14:0,17,346	1/1:0,7:7:18.04:184,18,0
chr10	32343869	.	CAT	C	1844.88	PASS	AB=0.967;AC=42;AF=0.778;AN=54;BaseQRankSum=-1.735;DP=305;FS=0.000;HRun=0;HaplotypeScore=77.0222;InbreedingCoeff=0.2035;MQ=69.76;MQ0=5;MQRankSum=1.989;QD=8.13;ReadPosRankSum=1.453;VQSLOD=3.0756;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,0:10:5.62:45,6,0	1/1:2,1:3:3.01:38,3,0	0/0:26,0:11:10.06:0,10,57	0/0:45,0:16:13.78:0,14,108	0/1:6,2:8:23.85:38,0,24	0/1:8,0:8:7.09:77,0,7	1/1:10,0:10:4.07:11,4,0	1/1:35,0:35:25.07:362,25,0	1/1:2,0:2:2.04:6,2,0	1/1:9,0:9:19.01:140,19,0	1/1:8,0:8:11.89:78,12,0	1/1:5,1:6:7.72:53,8,0	1/1:7,0:7:5.05:43,5,0	1/1:2,0:2:2.04:6,2,0	0/0:4,0:4:12.04:0,12,196	1/1:6,0:6:10.88:77,11,0	1/1:14,0:14:24.55:187,25,0	0/1:12,0:12:2.94:64,0,3	1/1:20,1:21:9.23:181,9,0	1/1:5,0:5:2.72:37,3,0	0/1:8,0:8:1.13:18,0,1	./.	0/1:7,0:7:9:46,0,9	1/1:7,0:7:13.85:145,14,0	1/1:9,1:10:15.17:105,15,0	1/1:10,0:11:0.37:77,0,0	1/1:11,0:11:0.97:99,1,0	0/1:7,0:7:25.96:58,0,26
chr10	32343880	.	A	ATG	4651.67	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-2.555;DP=291;FS=4.181;HRun=0;HaplotypeScore=68.8985;InbreedingCoeff=0.5792;MQ=72.98;MQ0=7;MQRankSum=1.704;QD=22.80;ReadPosRankSum=1.302;VQSLOD=4.7405;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,3:9:17.87:268,18,0	1/1:2,1:3:2.80:13,3,0	0/0:29,0:10:0.60:0,1,39	0/0:52,0:20:25.94:0,26,172	1/1:7,2:9:0.09:138,0,0	1/1:3,4:7:20.58:281,21,0	1/1:1,7:8:8.98:134,9,0	1/1:37,0:37:51.17:289,51,0	1/1:1,1:2:6.01:83,6,0	1/1:4,4:8:23.33:338,23,0	1/1:3,3:6:17.81:233,18,0	1/1:3,1:4:11.76:152,12,0	1/1:3,1:4:11.79:118,12,0	1/1:0,1:1:3.01:58,3,0	0/0:5,0:5:15.04:0,15,208	1/1:2,3:5:15.02:205,15,0	1/1:7,6:13:29.70:419,30,0	1/1:4,6:10:24.08:410,24,0	1/1:17,0:17:24.41:205,24,0	1/1:4,0:4:6.12:20,6,0	1/1:7,0:7:11.97:47,12,0	1/1:1,0:1:2.99:23,3,0	1/1:3,4:7:17.82:264,18,0	1/1:5,2:7:14.74:150,15,0	1/1:4,4:8:17.71:258,18,0	1/1:5,3:8:20.72:276,21,0	1/1:11,0:11:17.27:87,17,0	1/1:5,3:8:17.82:183,18,0
chr10	32344903	.	T	TA	16788.36	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-7.731;DP=656;FS=4.301;HRun=8;HaplotypeScore=60.1045;InbreedingCoeff=0.9829;MQ=78.54;MQ0=0;MQRankSum=-3.500;QD=28.36;ReadPosRankSum=3.058;VQSLOD=5.4998;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,17:18:45.13:519,45,0	1/1:1,8:9:18.05:208,18,0	0/0:22,0:23:47.87:0,48,418	0/0:12,0:12:18.48:0,18,165	1/1:2,39:41:99:1245,108,0	1/1:3,25:28:66.20:761,66,0	1/1:3,15:18:36.11:416,36,0	1/1:12,30:42:65.78:989,66,0	1/1:2,20:22:57.17:658,57,0	1/1:3,27:30:81.19:901,81,0	1/1:3,18:21:54.08:594,54,0	1/1:1,26:27:66.20:761,66,0	1/1:4,14:18:39.11:440,39,0	1/1:1,22:23:57.17:658,57,0	0/0:29,0:29:80.13:0,80,724	1/1:0,23:23:57.17:658,57,0	1/1:4,21:25:63.19:727,63,0	1/1:1,8:9:24.07:277,24,0	1/1:1,20:21:57.17:658,57,0	1/1:1,25:26:75.14:836,75,0	1/1:0,17:17:45.13:519,45,0	1/1:1,25:26:69.20:796,69,0	1/1:4,17:21:48.13:543,48,0	1/1:2,21:23:60.18:689,60,0	1/1:3,14:17:45.13:512,45,0	1/1:5,31:36:93.28:1073,93,0	1/1:6,39:45:99:1213,106,0	1/1:1,5:6:12.04:138,12,0
chr10	32345453	.	A	AT	217.66	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-4.880;DP=560;FS=1.137;HRun=8;HaplotypeScore=51.6065;InbreedingCoeff=0.8882;MQ=69.18;MQ0=0;MQRankSum=-0.064;QD=21.77;ReadPosRankSum=2.161;VQSLOD=4.0054;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:69.04:0,69,631	1/1:1,9:10:27.08:312,27,0	0/0:10,0:9:14.81:0,15,114	0/0:6,0:6:6.41:0,6,82	0/0:43,0:43:99:0,123,1116	0/0:18,0:18:54.03:0,54,494	0/0:16,0:16:42.01:0,42,384	0/0:37,0:37:92.99:0,93,840	0/0:18,0:18:45.02:0,45,412	0/0:34,0:34:83.99:0,84,759	0/0:15,0:15:45.02:0,45,411	0/0:18,0:18:48.02:0,48,439	0/0:20,0:20:54.03:0,54,494	0/0:15,0:15:45.01:0,45,407	0/0:20,0:19:57.03:0,57,522	0/0:20,0:20:54.02:0,54,494	0/0:20,0:20:54.02:0,54,493	0/0:7,0:7:20.97:0,21,184	0/0:17,0:17:23.96:0,24,412	0/0:31,0:31:84.03:0,84,764	0/0:17,0:17:51.03:0,51,467	0/0:21,0:21:60.03:0,60,549	0/0:30,0:30:87.03:0,87,792	0/0:7,0:7:21.01:0,21,192	0/0:28,0:28:72:0,72,650	0/0:18,0:18:51.02:0,51,464	0/0:26,1:27:37.40:0,37,592	0/0:13,0:13:39.02:0,39,357
chr10	32345751	.	TATTC	T	3936.89	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=11.282;DP=787;FS=0.439;HRun=0;HaplotypeScore=124.6572;InbreedingCoeff=0.9648;MQ=69.18;MQ0=4;MQRankSum=0.711;QD=18.23;ReadPosRankSum=0.332;VQSLOD=3.1301;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:27.09:0,27,600	0/0:9,0:9:15.05:0,15,342	0/0:17,0:17:14.94:0,15,259	0/0:22,0:19:15.05:0,15,348	0/0:42,0:42:78.26:0,78,1779	0/0:29,0:29:48.16:0,48,1135	0/0:30,0:30:51.18:0,51,1189	1/1:32,0:32:15.03:188,15,0	0/0:24,0:24:60.21:0,60,1360	0/0:36,0:36:72.23:0,72,1641	0/0:23,0:23:39.13:0,39,892	0/0:36,0:36:69.24:0,69,1593	0/0:36,0:36:75.25:0,75,1705	0/0:32,0:32:63.22:0,63,1472	1/1:17,29:46:75.13:1176,75,0	0/0:44,0:44:99:0,99,2253	0/0:25,0:25:48.16:0,48,1102	1/1:6,2:8:6.02:94,6,0	1/1:18,7:23:21.07:329,21,0	1/1:15,6:21:15.05:235,15,0	1/1:21,23:44:66.22:1021,66,0	0/0:24,0:24:36.12:0,36,821	0/0:21,0:21:45.13:0,45,973	0/0:22,0:22:45.63:0,46,1067	0/0:32,0:32:60.21:0,60,1421	0/0:32,0:32:66.23:0,66,1531	1/1:17,23:40:56.99:893,57,0	0/0:11,0:11:24.08:0,24,564
chr10	32347533	.	AAGAGAG	A	2193.43	PASS	AB=0.979;AC=35;AF=0.795;AN=44;BaseQRankSum=3.112;DP=450;FS=38.883;HRun=0;HaplotypeScore=147.2356;InbreedingCoeff=0.2103;MQ=44.91;MQ0=8;MQRankSum=-2.096;QD=6.61;ReadPosRankSum=-1.728;VQSLOD=0.6099;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:17:2.03:7,2,0	1/1:5,1:6:3.01:60,3,0	./.	./.	0/1:38,0:38:99:111,0,112	0/0:12,0:15:0.35:0,0,20	0/1:16,0:16:27.05:27,0,44	./.	1/1:8,0:8:3:25,3,0	1/1:22,1:25:12.69:255,13,0	1/1:20,3:24:18.89:231,19,0	1/1:8,0:8:5.93:44,6,0	1/1:12,0:11:3.01:49,3,0	1/1:13,1:14:9.63:90,10,0	0/0:21,0:21:19.19:0,19,488	1/1:14,1:15:9.91:139,10,0	1/1:20,0:20:11.51:155,12,0	0/0:7,0:7:0.89:0,1,2	./.	1/1:19,0:22:9.03:126,9,0	./.	1/1:21,2:23:8.98:123,9,0	1/1:18,2:20:15.05:268,15,0	./.	1/1:21,2:24:20.98:302,21,0	0/1:14,1:15:4.87:162,0,5	1/1:19,0:20:6.02:84,6,0	1/1:1,3:4:3.01:60,3,0
chr10	32351224	.	TCTCTCTCTCTCTCTCTCTCTCTCTCC	T	793.19	PASS	AB=1.000;AC=8;AF=0.333;AN=24;BaseQRankSum=0.706;DP=241;FS=5.643;HRun=0;HaplotypeScore=53.7321;InbreedingCoeff=0.2327;MQ=18.05;MQ0=149;MQRankSum=-0.618;QD=18.03;ReadPosRankSum=3.179;VQSLOD=0.7144;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	./.	./.	0/0:10,0:3:0.47:0,0,1	./.	0/0:8,0:4:1.36:0,1,3	0/1:7,0:6:3.52:15,0,4	./.	0/0:7,0:4:0.89:0,1,2	1/1:11,0:4:2.94:18,3,0	1/1:4,1:2:3.01:197,3,0	0/0:13,0:3:0.47:0,0,1	0/0:10,0:2:0.89:0,1,2	0/0:11,0:3:1.99:0,2,13	./.	./.	./.	./.	./.	./.	./.	0/0:17,0:7:0.89:0,1,2	1/1:9,0:4:5.18:211,5,0	0/1:12,0:9:1.95:432,0,2	./.
chr10	32351944	.	G	GC	5336.47	PASS	AC=48;AF=0.889;AN=54;BaseQRankSum=11.083;DP=668;FS=10.670;HRun=0;HaplotypeScore=238.2304;InbreedingCoeff=0.9693;MQ=93.08;MQ0=0;MQRankSum=-2.662;QD=9.40;ReadPosRankSum=4.641;VQSLOD=3.7069;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:45,0:45:73.48:340,73,0	1/1:9,0:9:8.52:62,9,0	0/0:27,0:27:78.57:0,79,989	0/0:39,0:39:98.84:0,99,1273	1/1:32,0:32:45.69:258,46,0	1/1:29,0:29:55.50:277,56,0	1/1:19,2:21:20.78:190,21,0	1/1:29,0:29:54.15:317,54,0	1/1:35,0:35:27.44:285,27,0	1/1:18,0:18:36.22:208,36,0	1/1:21,0:21:17.19:106,17,0	1/1:21,0:21:41.02:218,41,0	1/1:21,0:21:28.42:199,28,0	1/1:18,2:20:42.93:284,43,0	0/0:34,0:34:96.27:0,96,1304	1/1:24,0:24:37.76:195,38,0	1/1:23,2:25:39.94:254,40,0	1/1:23,0:23:55.04:249,55,0	1/1:19,1:20:24.46:205,24,0	1/1:31,0:31:47.29:261,47,0	1/1:19,0:19:35.55:187,36,0	1/1:19,0:19:31.09:140,31,0	1/1:21,0:21:31.57:197,32,0	1/1:22,0:22:47.49:243,47,0	1/1:23,1:24:26.74:238,27,0	1/1:21,0:20:47.49:305,47,0	1/1:18,0:18:22.11:119,22,0	./.
chr10	32352170	.	A	ACTTCCTCCACCT	66625.71	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=1.840;DP=712;FS=0.000;HRun=0;HaplotypeScore=217.2840;InbreedingCoeff=0.9922;MQ=80.92;MQ0=0;MQRankSum=-13.806;QD=107.63;ReadPosRankSum=4.139;VQSLOD=4.4414;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,19:38:69.19:3599,69,0	1/1:4,5:12:33.11:1798,33,0	0/0:29,0:29:75.21:0,75,2151	0/0:30,0:30:77.45:0,77,2473	1/1:7,14:28:44.89:1787,45,0	1/1:3,18:24:63.22:3713,63,0	1/1:11,10:32:48.08:2369,48,0	1/1:20,8:44:99:6180,129,0	1/1:6,15:28:57.13:2989,57,0	1/1:10,9:27:69.18:3218,69,0	1/1:6,6:18:29.95:1190,30,0	1/1:4,12:26:48.16:2578,48,0	1/1:2,15:26:48.16:2834,48,0	1/1:1,11:24:36.12:2222,36,0	0/0:34,0:34:99:0,99,3464	1/1:7,18:32:66.23:3704,66,0	1/1:4,11:19:42.14:2317,42,0	1/1:2,4:9:18.06:1036,18,0	1/1:5,4:14:36.11:1591,36,0	1/1:6,15:29:60.08:3004,60,0	1/1:6,5:17:21.07:1292,21,0	1/1:8,16:33:63.04:3055,63,0	1/1:2,12:21:36.12:2222,36,0	1/1:4,8:20:30.09:1419,30,0	1/1:4,16:27:60.14:3283,60,0	1/1:11,13:32:81.28:4452,81,0	1/1:5,19:32:63.13:3725,63,0	1/1:2,4:7:18.06:1049,18,0
chr10	32353357	.	TA	T	18816.52	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-5.487;DP=564;FS=2.436;HRun=2;HaplotypeScore=59.5895;InbreedingCoeff=0.9656;MQ=84.63;MQ0=0;MQRankSum=-9.054;QD=35.44;ReadPosRankSum=5.729;VQSLOD=5.0111;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,38:39:99:1440,111,0	1/1:0,6:6:18.06:234,18,0	0/0:16,0:16:36:0,36,459	0/0:17,0:17:50.76:0,51,592	1/1:1,29:30:84.27:1089,84,0	1/1:1,24:25:66.21:856,66,0	1/1:0,16:16:42.14:545,42,0	1/1:1,39:40:99:1387,114,0	1/1:1,23:24:63.20:817,63,0	1/1:0,14:14:42.12:529,42,0	1/1:0,13:13:39.13:503,39,0	1/1:0,27:27:66.21:856,66,0	1/1:0,25:25:63.20:814,63,0	1/1:0,18:18:51.17:662,51,0	1/1:2,25:27:72.23:934,72,0	1/1:1,19:20:57.19:740,57,0	1/1:0,24:24:66.21:856,66,0	1/1:0,21:21:54.18:700,54,0	1/1:0,25:25:75.22:946,75,0	1/1:0,19:19:57.12:703,57,0	1/1:0,13:13:33.11:428,33,0	1/1:1,18:19:51.17:662,51,0	1/1:0,14:14:36.12:467,36,0	1/1:0,20:20:57.19:740,57,0	1/1:0,9:9:24.08:311,24,0	1/1:0,21:21:63.20:818,63,0	1/1:0,17:17:51.17:661,51,0	1/1:0,5:5:9.03:117,9,0
chr10	32353953	.	AAT	A	3952.69	PASS	AC=36;AF=0.720;AN=50;BaseQRankSum=9.186;DP=294;FS=2.790;HRun=0;HaplotypeScore=75.2504;InbreedingCoeff=0.7740;MQ=54.89;MQ0=0;MQRankSum=-3.415;QD=20.91;ReadPosRankSum=4.047;VQSLOD=4.0751;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,17:17:44.97:505,45,0	1/1:3,4:7:3.01:34,3,0	./.	0/0:10,0:5:2.37:0,2,8	1/1:4,17:21:24.07:284,24,0	1/1:1,12:13:21.06:236,21,0	1/1:2,0:2:3.01:37,3,0	0/0:38,0:38:99:0,99,1545	1/1:2,4:6:6.02:71,6,0	1/1:4,11:15:30.02:335,30,0	1/1:4,9:13:15.05:179,15,0	1/1:1,6:7:15.04:173,15,0	1/1:0,6:6:18.05:207,18,0	1/1:1,7:8:12.03:136,12,0	0/0:4,0:4:6.02:0,6,101	1/1:2,5:7:15.04:168,15,0	1/1:0,12:12:33.10:389,33,0	1/1:0,4:4:12.03:136,12,0	0/0:14,0:14:24.08:0,24,399	0/0:13,0:13:6.02:0,6,82	0/0:3,0:3:6.02:0,6,96	./.	1/1:1,7:8:6.02:65,6,0	./.	1/1:3,12:15:15.05:180,15,0	1/1:2,19:21:54.16:642,54,0	0/0:15,0:15:39.12:0,39,584	1/1:0,7:7:15.04:176,15,0
chr10	32353966	.	GTA	G	5237.61	PASS	AB=0.933;AC=39;AF=0.750;AN=52;BaseQRankSum=5.388;DP=309;FS=3.615;HRun=0;HaplotypeScore=79.2015;InbreedingCoeff=0.7798;MQ=50.81;MQ0=2;MQRankSum=-3.166;QD=23.38;ReadPosRankSum=2.587;VQSLOD=5.1641;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,17:21:60.18:725,60,0	1/1:1,6:7:6.02:67,6,0	./.	0/1:13,0:5:1.36:1,0,8	1/1:10,12:22:36.11:441,36,0	1/1:7,10:17:33.10:398,33,0	1/1:1,1:2:6.02:72,6,0	0/0:34,0:34:73.10:0,73,622	1/1:3,3:6:12.04:150,12,0	1/1:3,11:14:35.94:379,36,0	1/1:4,7:11:21.07:261,21,0	1/1:0,6:6:15.04:177,15,0	1/1:2,6:8:24.06:276,24,0	1/1:1,6:7:12.04:140,12,0	0/0:5,0:5:8.37:0,8,74	1/1:0,9:9:21.06:240,21,0	1/1:2,16:18:42.13:502,42,0	1/1:1,4:5:15.05:180,15,0	0/0:12,0:12:29:0,29,246	0/0:12,0:12:10.78:0,11,45	0/0:3,0:3:4.44:0,4,14	1/1:3,0:3:3.01:39,3,0	1/1:2,5:7:6.02:67,6,0	./.	1/1:4,9:13:18.05:219,18,0	1/1:2,22:24:62.98:724,63,0	0/0:16,0:16:11.37:0,11,107	1/1:2,8:10:15.04:177,15,0
chr10	32353977	.	CAT	C	1927.46	PASS	AB=0.922;AC=14;AF=0.259;AN=54;BaseQRankSum=-6.220;DP=326;FS=0.000;HRun=0;HaplotypeScore=91.4596;InbreedingCoeff=0.5185;MQ=52.16;MQ0=2;MQRankSum=2.559;QD=15.06;ReadPosRankSum=-2.205;VQSLOD=3.0475;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:36.28:0,36,161	0/0:6,0:6:0.89:0,1,2	./.	0/0:15,0:6:0.10:0,0,46	0/0:18,0:18:28.43:0,28,197	0/0:14,1:15:16.19:0,16,59	0/1:4,0:4:0:0,0,0	1/1:7,27:34:78.16:890,78,0	0/0:6,0:6:10.86:0,11,55	0/0:14,0:14:25.21:0,25,201	0/0:10,0:10:15.20:0,15,103	0/0:8,0:8:11.52:0,12,78	0/0:10,0:10:21.52:0,22,138	0/0:9,0:9:12.59:0,13,153	0/1:6,2:8:57.61:58,0,171	0/0:10,0:10:9.86:0,10,62	0/1:18,1:18:10.85:11,0,93	0/0:8,0:8:17.73:0,18,153	1/1:3,11:14:33.10:402,33,0	1/1:3,9:12:12.04:151,12,0	1/1:0,4:4:6.02:76,6,0	0/0:4,0:4:8.62:0,9,103	0/0:7,0:7:6.49:0,6,91	0/0:1,0:1:3.01:0,3,45	0/1:14,1:15:12.63:13,0,166	0/0:24,0:24:43.24:0,43,275	1/1:1,17:18:39.12:492,39,0	0/0:7,1:8:8.65:0,9,29
chr10	32354717	.	CTGTGTGTGGGTGTATA	C	6646.80	PASS	AB=1.000;AC=41;AF=0.732;AN=56;BaseQRankSum=12.986;DP=627;FS=10.701;HRun=0;HaplotypeScore=264.2550;InbreedingCoeff=0.7385;MQ=60.12;MQ0=4;MQRankSum=-9.501;QD=15.94;ReadPosRankSum=2.290;VQSLOD=2.1167;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:49,0:48:3.01:79,3,0	1/1:12,1:13:9.03:295,9,0	0/0:34,0:25:57.10:0,57,1371	0/0:31,0:22:49.71:0,50,1620	1/1:29,2:31:15.05:442,15,0	1/1:19,0:20:6.02:195,6,0	1/1:10,0:10:6.02:158,6,0	0/0:38,0:38:93.28:0,93,2282	1/1:19,0:19:15.04:347,15,0	1/1:23,0:23:23.60:423,24,0	1/1:16,0:16:9.03:226,9,0	1/1:16,0:16:12.04:294,12,0	1/1:16,0:16:9.03:238,9,0	1/1:22,0:22:23.59:601,24,0	0/1:30,0:30:64.41:64,0,803	1/1:30,2:32:24.08:710,24,0	1/1:4,5:9:9.03:329,9,0	1/1:9,0:9:15.89:240,16,0	0/0:23,0:23:45.29:0,45,1206	0/0:33,0:33:46.66:0,47,1312	0/0:36,0:36:60.29:0,60,921	1/1:25,0:25:15.03:199,15,0	1/1:11,0:11:3:28,3,0	1/1:16,0:17:9.97:216,10,0	1/1:19,2:21:24.08:706,24,0	1/1:25,0:25:41.58:851,42,0	0/0:15,0:15:18.08:0,18,561	1/1:3,0:3:1.55:4,2,0
chr10	32354719	.	GTGTGTGGGTGTATA	G	9139.70	PASS	AB=1.000;AC=43;AF=0.768;AN=56;BaseQRankSum=11.944;DP=623;FS=19.909;HRun=0;HaplotypeScore=228.2155;InbreedingCoeff=0.5420;MQ=59.54;MQ0=6;MQRankSum=-9.312;QD=19.91;ReadPosRankSum=3.278;VQSLOD=1.9164;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:7,39:45:3.01:124,3,0	1/1:2,11:13:9.03:352,9,0	0/0:35,0:25:57.10:0,57,1345	0/0:29,0:21:40.11:0,40,1506	1/1:6,25:31:15.05:524,15,0	1/1:4,14:18:6.02:226,6,0	1/1:1,9:10:6.02:248,6,0	0/0:38,0:38:96.29:0,96,2213	1/1:0,17:17:15.05:568,15,0	1/1:4,20:24:29.66:468,30,0	1/1:3,12:15:9.03:361,9,0	1/1:6,11:16:12.04:474,12,0	1/1:2,19:21:8.91:372,9,0	1/1:14,7:21:23.70:916,24,0	0/1:30,0:30:99:263,0,729	1/1:9,21:30:24.08:896,24,0	1/1:8,1:9:9.03:307,9,0	1/1:9,0:9:18.01:288,18,0	0/0:23,0:22:19.01:0,19,1084	0/1:32,0:32:57.51:58,0,1138	0/0:38,0:38:34.87:0,35,799	1/1:1,24:25:15.05:416,15,0	1/1:2,8:10:3.01:73,3,0	1/1:17,0:17:9.43:202,9,0	1/1:3,18:21:24.08:901,24,0	1/1:4,21:25:47.66:1074,48,0	0/1:15,0:15:25.38:25,0,451	1/1:3,0:3:1.55:4,2,0
chr10	32354733	.	ATGTGTGTGTGTG	A	7073.30	PASS	AB=0.938;AC=38;AF=0.679;AN=56;BaseQRankSum=5.427;DP=631;FS=6.431;HRun=0;HaplotypeScore=202.0999;InbreedingCoeff=0.2252;MQ=49.31;MQ0=19;MQRankSum=-3.569;QD=13.25;ReadPosRankSum=5.994;VQSLOD=2.5409;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:47,0:44:3.01:48,3,0	1/1:13,0:13:9.03:155,9,0	0/0:27,0:15:6.02:0,6,142	0/0:29,0:19:7.58:0,8,252	1/1:28,0:28:12.51:207,13,0	1/1:17,0:17:6.02:109,6,0	1/1:12,0:11:6.02:97,6,0	1/1:27,14:40:42.11:737,42,0	1/1:19,0:19:9.39:192,9,0	0/0:27,0:26:24.08:0,24,498	1/1:16,0:16:9.03:136,9,0	1/1:15,0:14:13.59:172,14,0	0/1:21,0:21:60.89:139,0,61	0/1:21,0:20:94.90:307,0,95	1/1:13,19:34:45.15:1427,45,0	1/1:27,0:27:24.55:419,25,0	0/1:10,0:8:23.80:128,0,24	0/0:8,0:8:6:0,6,86	0/1:17,8:23:29.90:531,0,30	1/1:17,15:32:33.58:1054,34,0	0/1:26,12:39:21.12:200,0,21	1/1:27,0:27:4.74:55,5,0	0/1:13,0:13:0.13:0,0,68	1/1:16,0:16:5.20:63,5,0	0/1:23,0:23:19.59:335,0,20	0/1:25,0:25:99:144,0,400	1/1:7,6:13:12.04:419,12,0	0/0:5,0:5:9.03:0,9,181
chr10	32355111	.	GT	G	11508.95	PASS	AB=0.929;AC=53;AF=0.946;AN=56;BaseQRankSum=-2.983;DP=569;FS=3.448;HRun=10;HaplotypeScore=83.8572;InbreedingCoeff=0.6261;MQ=67.45;MQ0=1;MQRankSum=-1.773;QD=20.66;ReadPosRankSum=3.207;VQSLOD=5.7627;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,27:29:63.45:548,63,0	1/1:3,11:14:32.98:286,33,0	0/1:12,1:7:17.04:17,0,54	0/0:12,0:10:12.75:0,13,118	1/1:5,42:49:99:1028,103,0	1/1:1,19:20:50.99:443,51,0	1/1:1,14:15:29.99:260,30,0	1/1:4,24:28:65.95:573,66,0	1/1:2,11:13:31.55:265,32,0	1/1:1,27:28:80.95:695,81,0	1/1:2,21:23:56.96:495,57,0	1/1:1,14:15:41.99:365,42,0	1/1:4,12:16:32.94:286,33,0	1/1:2,24:26:59.98:521,60,0	1/1:1,12:13:32.99:287,33,0	1/1:2,23:25:59.98:521,60,0	1/1:1,22:23:55.81:474,56,0	1/1:2,11:13:32.99:284,33,0	1/1:8,12:20:38.82:326,39,0	1/1:2,33:36:92:787,92,0	1/1:1,8:9:20.99:182,21,0	1/1:1,21:22:62.98:546,63,0	1/1:1,26:27:71.98:624,72,0	1/1:1,7:8:19.81:161,20,0	1/1:3,14:17:38.99:338,39,0	1/1:1,18:19:53.99:469,54,0	1/1:3,25:28:62.98:547,63,0	1/1:0,8:8:21:182,21,0
chr10	32356130	.	C	CTTTCCT	37758.58	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-8.750;DP=627;FS=0.659;HRun=0;HaplotypeScore=119.1594;InbreedingCoeff=0.9984;MQ=72.90;MQ0=0;MQRankSum=-17.931;QD=90.77;ReadPosRankSum=2.370;VQSLOD=6.7342;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,13:22:45.15:1592,45,0	1/1:1,7:10:23.92:811,24,0	0/0:22,0:23:60.07:0,60,1306	0/0:20,0:20:51.16:0,51,1073	1/1:2,20:27:69.17:2249,69,0	1/1:4,21:28:69.24:2581,69,0	1/1:4,13:17:51.18:1858,51,0	0/0:38,0:37:99:0,114,2596	1/1:3,15:22:53.89:1974,54,0	1/1:6,19:33:96.14:2988,96,0	1/1:1,15:21:51.14:1777,51,0	1/1:2,18:22:54.19:2024,54,0	1/1:7,17:26:69.24:2545,69,0	1/1:3,14:22:51.18:1793,51,0	0/0:17,0:17:51.15:0,51,1252	1/1:3,16:21:57.20:2062,57,0	1/1:2,5:8:21.07:787,21,0	1/1:2,6:10:24.08:902,24,0	0/0:19,0:19:51.16:0,51,1177	0/0:28,0:28:84.28:0,84,2056	0/0:22,0:22:63.20:0,63,1538	1/1:1,19:23:63.10:2125,63,0	1/1:4,20:26:69.24:2583,69,0	1/1:2,11:14:33.07:1144,33,0	1/1:3,23:29:75.26:2716,75,0	1/1:2,18:22:63.20:2235,63,0	0/0:44,0:43:99:0,129,3111	1/1:0,9:13:27.09:1013,27,0
chr10	32356950	.	A	AG	25674.48	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-7.937;DP=648;FS=1.223;HRun=0;HaplotypeScore=62.8069;InbreedingCoeff=0.9991;MQ=84.17;MQ0=0;MQRankSum=-11.045;QD=42.93;ReadPosRankSum=5.853;VQSLOD=5.0248;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,16:16:45.15:717,45,0	1/1:0,11:11:30.10:478,30,0	0/0:30,0:30:78.20:0,78,994	0/0:20,0:20:54.13:0,54,707	1/1:0,36:36:99:1584,102,0	1/1:0,29:29:84.08:1279,84,0	1/1:0,18:18:54.18:863,54,0	1/1:1,43:44:99:1894,123,0	1/1:2,19:21:54.18:862,54,0	1/1:0,37:37:99:1700,111,0	1/1:1,24:25:60.20:954,60,0	1/1:0,28:28:78.27:1232,78,0	1/1:0,17:17:48.16:767,48,0	1/1:0,23:23:63.21:1006,63,0	1/1:0,22:22:63.21:1007,63,0	1/1:1,21:22:54.18:862,54,0	1/1:1,21:22:48.12:725,48,0	1/1:0,22:22:60.20:958,60,0	1/1:1,13:14:42.09:597,42,0	1/1:0,25:25:72.18:1118,72,0	1/1:0,15:15:39.13:623,39,0	1/1:0,15:15:41.99:609,42,0	1/1:0,20:20:60.20:952,60,0	1/1:0,14:14:39.13:623,39,0	1/1:0,19:19:48.08:735,48,0	1/1:0,42:42:99:1939,123,0	1/1:0,30:31:75.19:1160,75,0	1/1:0,10:10:27.09:431,27,0
chr10	32361638	.	A	AG	6209.82	PASS	AB=1.000;AC=46;AF=0.852;AN=54;BaseQRankSum=5.085;DP=318;FS=16.640;HRun=0;HaplotypeScore=171.7825;InbreedingCoeff=-0.1825;MQ=79.38;MQ0=0;MQRankSum=-3.639;QD=19.53;ReadPosRankSum=8.377;VQSLOD=3.9300;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:21,0:21:42.26:221,0,42	1/1:6,0:6:17.82:122,18,0	1/1:13,0:13:3.18:95,3,0	0/1:16,0:16:29.12:122,0,29	1/1:13,0:13:22.26:170,22,0	1/1:15,0:15:21.67:250,22,0	0/1:11,0:11:13.02:157,0,13	1/1:1,12:13:39.13:602,39,0	1/1:14,0:14:14.19:203,14,0	1/1:14,0:14:14.56:223,15,0	0/1:10,0:10:23.94:104,0,24	0/1:14,0:14:38.93:117,0,39	1/1:11,0:11:32.74:239,33,0	0/1:21,0:21:3.43:269,0,3	1/1:3,7:10:21.07:333,21,0	1/1:8,0:8:20.16:139,20,0	1/1:9,0:9:20.77:144,21,0	1/1:2,0:2:5.88:36,6,0	1/1:0,10:10:30.10:479,30,0	1/1:3,15:18:45.15:707,45,0	1/1:0,8:8:12.04:191,12,0	1/1:10,0:10:21.18:147,21,0	0/1:12,0:12:4.11:115,0,4	0/1:5,0:5:7.01:72,0,7	1/1:11,0:11:26.76:189,27,0	1/1:8,0:8:1.36:108,1,0	1/1:3,12:15:45.04:658,45,0	./.
chr10	32361655	.	TA	T	3432.17	PASS	AB=0.811;AC=52;AF=0.963;AN=54;BaseQRankSum=5.982;DP=298;FS=117.401;HRun=3;HaplotypeScore=204.1884;InbreedingCoeff=-0.0484;MQ=68.27;MQ0=0;MQRankSum=-7.000;QD=11.52;ReadPosRankSum=2.967;VQSLOD=-0.1918;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,14:14:39.09:262,39,0	1/1:0,5:5:13.63:59,14,0	0/1:9,4:13:71.72:72,0,105	0/1:15,3:18:65.26:65,0,217	1/1:0,11:11:20.25:77,20,0	1/1:3,13:16:35.71:178,36,0	1/1:3,6:9:13.54:80,14,0	1/1:3,6:9:20.75:168,21,0	1/1:0,13:13:35.46:156,35,0	1/1:2,10:12:29.09:178,29,0	1/1:1,7:8:14.93:54,15,0	1/1:0,12:12:29.57:123,30,0	1/1:1,13:14:31.42:133,31,0	1/1:1,14:15:37.03:150,37,0	1/1:1,13:14:35.19:149,35,0	1/1:0,5:5:13.59:58,14,0	1/1:1,7:8:19.73:131,20,0	1/1:0,2:2:5.90:37,6,0	1/1:4,7:11:20.40:138,20,0	1/1:3,15:18:37.14:174,37,0	1/1:0,5:5:14.19:109,14,0	1/1:1,9:10:24.22:111,24,0	1/1:2,7:9:18.37:73,18,0	1/1:0,6:6:13.94:102,14,0	1/1:0,15:15:41.02:221,41,0	1/1:0,10:10:25.83:167,26,0	1/1:3,13:16:36.12:207,36,0	./.
chr10	32361660	.	C	CA	5374.98	PASS	AB=0.807;AC=52;AF=0.963;AN=54;BaseQRankSum=6.806;DP=304;FS=117.620;HRun=1;HaplotypeScore=216.6694;InbreedingCoeff=-0.0484;MQ=71.27;MQ0=0;MQRankSum=-7.494;QD=17.68;ReadPosRankSum=1.343;VQSLOD=0.8302;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,14:15:32.56:210,33,0	1/1:0,5:5:14.82:97,15,0	0/1:12,4:16:99:143,0,155	0/1:17,5:22:99:154,0,191	1/1:1,12:13:26.29:180,26,0	1/1:1,13:14:38.56:277,39,0	1/1:2,6:8:17.69:136,18,0	1/1:5,5:10:26.92:245,27,0	1/1:0,13:13:38.53:255,39,0	1/1:0,11:11:32.95:300,33,0	1/1:2,7:9:20.58:129,21,0	1/1:0,12:12:32.53:208,33,0	1/1:1,14:16:46.28:330,46,0	1/1:0,14:14:41.32:260,41,0	1/1:1,14:15:44.47:313,44,0	1/1:1,5:6:17.79:117,18,0	1/1:1,6:7:17.76:116,18,0	1/1:0,2:2:6:52,6,0	1/1:2,6:8:20.94:171,21,0	1/1:0,17:17:50.28:389,50,0	1/1:0,5:5:8.89:58,9,0	1/1:0,9:9:26.60:171,27,0	1/1:1,7:8:23.63:151,24,0	1/1:1,5:6:11.65:68,12,0	1/1:1,17:18:47.46:339,47,0	1/1:2,9:11:31.91:238,32,0	1/1:2,12:14:38.53:266,39,0	./.
chr10	32361707	.	A	AA	7010.60	PASS	AB=0.952;AC=55;AF=0.982;AN=56;BaseQRankSum=-0.646;DP=303;FS=7.623;HRun=2;HaplotypeScore=253.0837;InbreedingCoeff=-0.0386;MQ=88.36;MQ0=0;MQRankSum=-2.196;QD=23.14;ReadPosRankSum=2.481;VQSLOD=3.6970;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,0:8:18.03:177,18,0	1/1:4,0:4:9.02:87,9,0	1/1:13,4:17:37.29:229,37,0	0/1:19,1:20:4.17:207,0,4	1/1:11,0:11:15.10:120,15,0	1/1:7,0:7:18:168,18,0	1/1:6,0:6:18.04:178,18,0	1/1:11,0:11:33.03:302,33,0	1/1:14,0:14:41.88:391,42,0	1/1:19,0:19:50.06:436,50,0	1/1:11,0:11:29.91:260,30,0	1/1:12,0:12:35.87:332,36,0	1/1:15,0:15:42.05:412,42,0	1/1:16,0:16:39.04:384,39,0	1/1:18,0:18:51.06:496,51,0	1/1:6,0:6:18:169,18,0	1/1:4,0:4:11.98:109,12,0	1/1:2,0:2:6.01:63,6,0	1/1:6,0:6:15:133,15,0	1/1:15,0:15:33.50:320,34,0	1/1:1,0:1:3.01:30,3,0	1/1:7,0:7:11.88:151,12,0	1/1:13,0:13:30.03:295,30,0	1/1:3,0:3:6.01:61,6,0	1/1:19,0:19:50.90:479,51,0	1/1:14,0:14:42.04:387,42,0	1/1:23,0:23:63.04:601,63,0	1/1:1,0:1:3.01:30,3,0
chr10	32362472	.	TTA	T	7591.09	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=14.899;DP=745;FS=14.383;HRun=0;HaplotypeScore=87.4028;InbreedingCoeff=0.9994;MQ=86.25;MQ0=0;MQRankSum=-0.408;QD=38.73;ReadPosRankSum=0.045;VQSLOD=5.9426;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,108,2002	0/0:14,0:14:39.13:0,39,729	0/0:21,0:21:63.04:0,63,1035	0/0:30,0:30:78.20:0,78,1337	0/0:31,0:31:78.26:0,78,1449	0/0:28,0:28:75.24:0,75,1355	0/0:21,0:21:57.18:0,57,1035	1/1:1,45:46:99:1926,135,0	0/0:26,0:26:78.25:0,78,1429	0/0:27,0:27:81.27:0,81,1486	0/0:16,0:16:42.14:0,42,756	0/0:29,0:29:84.26:0,84,1503	0/0:30,0:30:90.29:0,90,1642	0/0:30,0:30:90.26:0,90,1584	1/1:1,32:33:28.09:1137,28,0	0/0:26,0:26:75.24:0,75,1355	0/0:23,0:23:69.21:0,69,1249	0/0:17,0:17:45.15:0,45,842	1/1:0,16:16:48.13:667,48,0	1/1:1,21:22:60.16:858,60,0	1/1:1,42:43:99:1546,105,0	0/0:24,0:24:69.22:0,69,1232	0/0:19,0:19:54.19:0,54,1010	0/0:28,0:28:84.29:0,84,1563	0/0:27,0:27:78.27:0,78,1460	0/0:37,0:37:99:0,111,2079	1/1:0,36:36:99:1457,99,0	0/0:8,0:8:24.08:0,24,449
chr10	32362782	.	CAT	C	2827.50	PASS	AB=0.991;AC=32;AF=0.571;AN=56;BaseQRankSum=9.449;DP=615;FS=0.767;HRun=0;HaplotypeScore=183.4582;InbreedingCoeff=-0.4126;MQ=56.29;MQ0=7;MQRankSum=-3.009;QD=4.89;ReadPosRankSum=4.204;VQSLOD=2.7815;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:36,0:36:24.65:25,0,145	0/1:14,0:14:47.48:59,0,47	0/0:23,0:15:38.16:0,38,397	0/0:14,0:8:21.01:0,21,228	0/1:32,0:32:98.61:99,0,135	0/1:35,0:35:97.21:97,0,165	0/1:24,0:24:42.27:42,0,172	1/1:24,0:24:65.86:559,66,0	0/1:24,1:25:94.64:95,0,134	0/1:25,0:25:64.08:64,0,190	0/1:24,0:24:69.82:70,0,80	0/1:19,2:20:70.16:74,0,70	0/1:18,0:18:60.04:60,0,115	0/1:26,0:26:83.17:97,0,83	1/1:15,0:14:28.49:221,28,0	0/1:21,0:21:37.59:38,0,139	0/1:25,0:23:6.82:7,0,165	0/1:13,0:13:28.59:29,0,71	1/1:11,0:11:29.88:244,30,0	1/1:18,1:19:11.44:287,11,0	1/1:13,0:12:17.83:133,18,0	0/1:26,0:26:48.40:48,0,141	0/1:21,0:21:57.12:57,0,91	0/1:19,0:19:14.80:15,0,59	0/1:32,0:32:77.68:78,0,153	0/1:28,2:30:99:199,0,193	1/1:22,1:23:33.72:300,34,0	0/1:6,0:6:1.99:2,0,65
chr10	32362784	.	TAC	T	5508.72	PASS	AB=0.917;AC=41;AF=0.732;AN=56;BaseQRankSum=1.482;DP=617;FS=0.000;HRun=0;HaplotypeScore=178.3552;InbreedingCoeff=0.5302;MQ=53.96;MQ0=10;MQRankSum=0.182;QD=10.66;ReadPosRankSum=1.588;VQSLOD=4.6738;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:31,4:35:22.53:242,23,0	1/1:3,11:14:21.05:223,21,0	0/0:22,0:14:2.80:0,3,13	0/0:13,0:7:3.01:0,3,47	1/1:12,19:32:15.72:391,16,0	1/1:20,16:36:39.06:411,39,0	1/1:16,8:24:23.96:271,24,0	0/0:23,0:23:2.42:0,2,19	1/1:14,11:25:21.08:299,21,0	1/1:19,6:24:42.08:443,42,0	1/1:15,8:24:34.64:380,35,0	1/1:8,13:21:20.75:186,21,0	1/1:14,4:18:29.59:310,30,0	1/1:12,13:26:21.13:300,21,0	0/0:14,0:13:2.44:0,2,19	1/1:12,7:20:9:229,9,0	1/1:21,4:23:9.02:100,9,0	1/1:5,8:13:9.50:103,9,0	0/0:14,0:13:4.24:0,4,29	0/1:16,0:16:5.03:5,0,58	0/0:14,0:13:2.48:0,2,23	1/1:19,7:27:18.72:172,19,0	1/1:11,9:20:26.99:274,27,0	1/1:13,7:20:9.03:102,9,0	1/1:19,15:35:41.10:417,41,0	1/1:20,9:31:59.90:609,60,0	0/1:23,0:22:3.32:3,0,81	0/1:4,1:6:10.52:38,0,11
chr10	32362806	.	CACACAT	C	11295.75	PASS	AB=1.000;AC=52;AF=0.929;AN=56;BaseQRankSum=-0.056;DP=615;FS=5.456;HRun=0;HaplotypeScore=212.0249;InbreedingCoeff=0.2864;MQ=46.74;MQ0=14;MQRankSum=1.791;QD=18.64;ReadPosRankSum=-0.433;VQSLOD=3.6025;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:31,0:31:35.38:416,35,0	1/1:16,0:16:33.03:523,33,0	1/1:6,0:2:2.04:6,2,0	0/0:9,0:4:5.97:0,6,49	1/1:36,0:35:42.22:645,42,0	1/1:32,0:32:35.88:702,36,0	1/1:26,0:26:43.18:385,43,0	1/1:10,0:9:1.55:72,2,0	1/1:26,0:26:47.37:707,47,0	1/1:26,0:24:52.25:793,52,0	1/1:26,0:26:44.98:541,45,0	1/1:25,0:23:35.97:487,36,0	1/1:21,1:22:49.34:587,49,0	1/1:33,0:33:32.82:657,33,0	1/1:13,0:11:6.46:49,6,0	1/1:27,0:27:51.07:650,51,0	1/1:22,0:20:8.80:157,9,0	1/1:14,0:14:23.69:225,24,0	1/1:10,0:9:19.92:144,20,0	0/1:20,0:20:21.07:109,0,21	1/1:15,0:13:10.20:61,10,0	1/1:9,14:23:20.88:381,21,0	1/1:22,0:22:40.20:464,40,0	1/1:23,0:23:29.27:292,29,0	1/1:41,0:41:74.04:918,74,0	1/1:31,0:30:85.76:1073,86,0	0/1:21,0:20:13.19:108,0,13	1/1:9,0:9:9.01:145,9,0
chr10	32362810	.	CAT	C	6455.64	PASS	AB=0.950;AC=51;AF=0.911;AN=56;BaseQRankSum=1.242;DP=615;FS=5.448;HRun=0;HaplotypeScore=201.9227;InbreedingCoeff=0.4877;MQ=46.58;MQ0=15;MQRankSum=1.634;QD=10.81;ReadPosRankSum=1.186;VQSLOD=4.3403;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:31,2:33:33.38:230,33,0	1/1:15,0:15:32.30:235,32,0	0/0:7,0:3:1.91:0,2,31	0/0:11,0:3:2.14:0,2,43	1/1:36,0:35:37.72:227,38,0	1/1:18,13:31:34.69:250,35,0	1/1:26,0:26:45.29:268,45,0	1/1:9,0:8:18.28:121,18,0	1/1:24,1:25:48.61:365,49,0	1/1:26,1:25:55.63:404,56,0	1/1:23,1:24:44.72:293,45,0	1/1:25,0:23:35.34:289,35,0	1/1:22,0:22:50.26:316,50,0	1/1:15,18:33:30.12:257,30,0	1/1:13,0:11:8.98:73,9,0	1/1:26,0:26:52.37:410,52,0	1/1:7,15:20:8.53:65,9,0	1/1:15,0:15:26.17:175,26,0	1/1:11,0:10:24.75:188,25,0	0/1:18,1:19:13:84,0,13	1/1:15,0:13:11.84:83,12,0	1/1:23,0:23:19.11:169,19,0	1/1:24,1:25:46.38:332,46,0	1/1:22,1:23:29.14:200,29,0	1/1:38,2:40:72:582,72,0	1/1:32,1:32:87.59:578,88,0	1/1:18,1:18:22.91:210,23,0	1/1:2,5:7:8.79:52,9,0
chr10	32362812	.	TACAC	T	10728.04	PASS	AB=1.000;AC=42;AF=0.750;AN=56;BaseQRankSum=-1.596;DP=634;FS=8.108;HRun=0;HaplotypeScore=205.2454;InbreedingCoeff=0.6975;MQ=46.59;MQ0=15;MQRankSum=1.156;QD=19.23;ReadPosRankSum=3.690;VQSLOD=3.6015;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:28,5:33:21.41:406,21,0	1/1:5,10:15:33.09:470,33,0	0/0:8,0:3:5.98:0,6,70	0/0:13,0:3:5.05:0,5,52	1/1:9,27:35:36.08:470,36,0	1/1:17,13:30:36.09:517,36,0	1/1:21,6:27:38.96:524,39,0	0/0:12,0:11:11.67:0,12,59	1/1:15,11:26:45:654,45,0	1/1:21,6:25:60.20:920,60,0	1/1:19,6:25:30:507,30,0	1/1:16,9:23:36.10:510,36,0	1/1:18,4:22:41.79:579,42,0	1/1:20,14:34:36.02:538,36,0	0/0:14,0:12:1.25:0,1,3	1/1:18,8:26:51.17:788,51,0	1/1:21,2:21:11.99:140,12,0	1/1:15,1:16:15.50:215,16,0	0/0:11,0:10:8.59:0,9,61	0/1:19,0:19:16.47:16,0,62	0/0:18,0:16:6:0,6,67	1/1:15,7:23:20.96:297,21,0	1/1:18,8:26:37.88:605,38,0	1/1:17,5:23:17.18:344,17,0	1/1:27,15:42:71.93:996,72,0	1/1:26,8:33:79.11:1094,79,0	0/1:19,0:18:2.62:3,0,133	1/1:5,2:7:9.03:134,9,0
chr10	32362830	.	CAT	C	623.69	PASS	AB=1.000;AC=16;AF=0.286;AN=56;BaseQRankSum=1.469;DP=655;FS=48.220;HRun=0;HaplotypeScore=227.5026;InbreedingCoeff=0.0916;MQ=48.23;MQ0=12;MQRankSum=-3.754;QD=2.20;ReadPosRankSum=-3.198;VQSLOD=0.9362;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:32,0:32:16.55:17,0,126	0/1:16,0:16:1.68:2,0,89	0/0:18,0:13:38.88:0,39,379	0/0:17,0:8:13.51:0,14,188	0/1:37,0:36:15.37:15,0,109	0/0:28,0:28:3.48:0,3,119	0/0:27,0:27:19.97:0,20,232	1/1:20,0:19:29.03:278,29,0	0/0:28,0:28:11.89:0,12,195	0/1:30,0:28:27.47:27,0,274	0/0:22,0:22:6.83:0,7,143	0/0:21,0:19:2.06:0,2,71	0/1:19,0:19:3.88:4,0,113	0/0:35,0:35:7.77:0,8,132	1/1:2,12:13:4.24:27,4,0	0/0:29,0:29:30.22:0,30,291	0/0:19,0:19:7.79:0,8,115	0/1:15,0:15:21.19:21,0,119	1/1:12,0:12:32.23:215,32,0	0/1:21,0:21:23.07:25,0,23	0/0:16,0:14:2.86:0,3,18	0/0:29,0:29:21.30:0,21,201	0/0:31,0:31:42.34:0,42,310	0/1:23,0:22:6.13:6,0,104	0/0:41,0:41:25.23:0,25,289	0/1:32,0:31:54.54:55,0,203	0/1:12,0:11:3.90:92,0,4	0/0:11,0:11:20.68:0,21,145
chr10	32362841	.	T	TCA	1994.78	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-5.501;DP=657;FS=0.000;HRun=0;HaplotypeScore=217.7483;InbreedingCoeff=0.9361;MQ=58.96;MQ0=9;MQRankSum=1.005;QD=19.75;ReadPosRankSum=-3.149;VQSLOD=3.0298;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:45.12:0,45,562	0/0:16,0:16:30.10:0,30,386	0/0:23,0:18:48.13:0,48,603	0/0:27,0:18:32.93:0,33,495	0/0:34,0:33:45.15:0,45,577	0/0:28,0:28:48.16:0,48,616	0/0:25,0:25:45.15:0,45,579	1/1:4,20:23:60.20:931,60,0	0/0:25,0:25:60.19:0,60,771	0/0:29,0:27:66.17:0,66,820	0/0:21,0:21:42.04:0,42,503	0/0:23,0:21:48.05:0,48,589	0/0:18,0:18:39.13:0,39,498	0/0:37,0:37:63.20:0,63,808	1/1:16,0:15:24.08:380,24,0	0/0:28,0:28:66.18:0,66,836	0/0:17,0:17:21.07:0,21,267	0/0:14,0:14:39.13:0,39,497	1/1:4,11:15:33.11:481,33,0	1/1:1,18:19:5.38:46,5,0	1/1:4,14:18:3.01:51,3,0	0/0:25,0:25:57.13:0,57,696	0/0:29,0:29:60.19:0,60,772	0/0:20,0:19:33.11:0,33,424	0/0:36,0:36:72.23:0,72,926	0/0:34,0:33:60.17:0,60,748	1/1:9,0:9:20.66:281,21,0	0/0:15,0:15:30.10:0,30,385
chr10	32364383	.	G	GTGTGTGTGTT	9599.81	PASS	AB=0.998;AC=31;AF=0.554;AN=56;BaseQRankSum=6.074;DP=584;FS=14.723;HRun=0;HaplotypeScore=189.3978;InbreedingCoeff=-0.3981;MQ=54.54;MQ0=11;MQRankSum=-9.975;QD=18.68;ReadPosRankSum=-1.551;VQSLOD=2.8470;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:21,0:21:99:111,0,129	0/1:11,0:11:60.20:60,0,98	0/0:23,0:12:5.37:0,5,187	0/0:28,0:19:51.07:0,51,528	0/1:24,0:24:61.84:236,0,62	0/1:29,0:29:99:316,0,215	0/1:24,0:25:99:452,0,136	1/1:36,0:36:99:1657,103,0	0/1:14,0:13:56.09:271,0,56	0/1:27,0:27:99:352,0,135	0/1:16,0:16:82.82:116,0,83	0/1:20,0:20:98.29:297,0,98	0/1:19,0:18:89.95:90,0,97	0/1:28,0:27:43.62:44,0,125	1/1:6,10:22:9.46:303,9,0	0/1:24,0:24:68.76:496,0,69	0/1:17,0:17:55.83:355,0,56	0/1:9,0:9:46.70:475,0,47	1/1:16,0:16:44.05:488,44,0	1/1:24,0:24:62.86:777,63,0	1/1:14,0:13:35.89:356,36,0	0/1:19,0:18:85.82:478,0,86	0/0:19,0:18:26.93:0,27,216	0/1:21,0:21:97.52:98,0,199	0/1:29,0:29:99:437,0,160	0/1:17,0:17:99:388,0,140	1/1:25,0:23:53.95:833,54,0	0/1:7,0:7:99:113,0,100
chr10	32366912	.	GTC	G	6043.95	PASS	AB=0.977;AC=38;AF=0.731;AN=52;BaseQRankSum=-1.800;DP=627;FS=0.807;HRun=0;HaplotypeScore=108.8142;InbreedingCoeff=0.4741;MQ=72.29;MQ0=16;MQRankSum=-1.935;QD=13.64;ReadPosRankSum=4.397;VQSLOD=4.7797;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:0:0,0,0	0/1:11,0:10:16.86:195,0,17	0/0:36,0:24:20.91:0,21,438	0/0:30,0:27:32.06:0,32,496	1/1:17,1:18:38.93:423,39,0	./.	1/1:13,0:12:27.08:330,27,0	1/1:15,21:36:60.18:708,60,0	0/1:18,0:18:0:0,0,0	1/1:24,0:24:54.15:639,54,0	1/1:23,0:21:3:29,3,0	1/1:17,0:16:3:26,3,0	1/1:18,1:19:45.13:533,45,0	1/1:24,0:24:2.85:30,3,0	./.	0/0:20,0:19:0:0,0,0	1/1:17,1:17:30.51:346,31,0	1/1:12,1:12:15.02:161,15,0	1/1:10,11:20:27.08:318,27,0	1/1:27,1:28:48.01:554,48,0	1/1:31,0:27:36.11:437,36,0	0/1:19,0:18:0.13:0,0,0	1/1:17,0:16:0.20:0,0,0	0/0:21,0:21:0:0,0,0	1/1:22,0:22:51.03:602,51,0	1/1:28,0:28:40.71:591,41,0	1/1:33,0:33:8.64:64,9,0	0/1:9,1:10:34.16:57,0,34
chr10	32366926	.	CTCGTGT	C	6735.61	PASS	AB=0.556;AC=44;AF=0.786;AN=56;BaseQRankSum=-1.876;DP=625;FS=3.822;HRun=0;HaplotypeScore=132.8563;InbreedingCoeff=0.4741;MQ=61.67;MQ0=27;MQRankSum=-1.949;QD=13.29;ReadPosRankSum=6.726;VQSLOD=2.9379;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:31:0:0,0,0	1/1:10,0:9:1.72:180,2,0	0/0:27,0:16:20.91:0,21,438	0/0:20,0:18:31.30:0,31,504	1/1:20,0:19:38.94:443,39,0	1/1:27,0:24:1.80:43,2,0	1/1:17,0:16:25.47:327,25,0	1/1:26,0:25:60.18:708,60,0	0/0:0,13:13:0:0,0,0	1/1:2,21:22:60.18:725,60,0	1/1:4,15:17:3:29,3,0	1/1:3,18:20:2.78:71,3,0	1/1:21,0:22:48.15:594,48,0	1/1:3,23:26:2.81:75,3,0	0/1:3,0:27:0:0,0,0	1/1:5,17:20:2.80:45,3,0	1/1:17,0:16:33.54:381,34,0	1/1:14,0:9:16.14:174,16,0	1/1:15,0:14:30.08:346,30,0	1/1:27,0:31:47.92:566,48,0	1/1:36,0:31:35.48:436,35,0	1/1:3,15:17:0.07:0,0,0	1/1:7,16:22:0.81:2,1,0	0/0:6,19:24:0:0,0,0	1/1:23,0:22:44.10:571,44,0	1/1:7,23:31:50.09:731,50,0	1/1:4,0:32:11.93:175,12,0	0/1:2,5:7:39.09:111,0,39
chr10	32366928	.	CGTGTGT	C	737.14	PASS	AB=0.960;AC=31;AF=0.620;AN=50;BaseQRankSum=2.612;DP=634;FS=28.506;HRun=0;HaplotypeScore=152.5510;InbreedingCoeff=0.1544;MQ=59.36;MQ0=29;MQRankSum=-1.962;QD=1.78;ReadPosRankSum=0.068;VQSLOD=0.9023;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:32:0:0,0,0	0/1:9,1:9:27.06:34,0,27	./.	./.	1/1:18,2:19:2.94:19,3,0	1/1:27,0:24:0.95:5,1,0	0/0:16,1:16:0.89:0,1,3	./.	0/0:13,0:13:0:0,0,0	1/1:24,0:23:6:66,6,0	0/1:19,0:17:0:0,0,0	1/1:19,2:20:2.93:57,3,0	0/1:21,0:22:0.15:103,0,0	1/1:27,0:27:2.81:40,3,0	0/1:28,0:28:0:0,0,0	1/1:22,0:20:2.58:13,3,0	0/1:17,0:18:4.65:5,0,15	0/1:15,0:10:35.70:37,0,36	1/1:14,0:14:3.01:53,3,0	1/1:29,0:31:5.28:35,5,0	0/0:37,0:32:0.46:0,0,1	1/1:19,0:18:0.07:0,0,0	1/1:21,2:22:0.81:2,1,0	0/0:26,0:25:0:0,0,0	0/0:22,0:21:11.52:0,12,116	1/1:30,0:31:11.84:142,12,0	1/1:32,0:32:11.93:167,12,0	0/1:8,0:7:12.86:71,0,13
chr10	32368093	.	T	TCTG	8843.59	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-12.323;DP=662;FS=10.334;HRun=0;HaplotypeScore=88.0272;InbreedingCoeff=0.9966;MQ=89.28;MQ0=0;MQRankSum=-4.976;QD=59.35;ReadPosRankSum=-1.071;VQSLOD=6.1435;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,120,2000	0/0:11,0:11:30.10:0,30,529	0/0:25,0:25:72.22:0,72,1187	0/0:26,0:26:78.08:0,78,1266	0/0:31,0:31:81.28:0,81,1418	0/0:26,0:26:78.27:0,78,1376	0/0:15,0:15:45.15:0,45,788	1/1:7,19:29:87.30:1896,87,0	0/0:24,0:24:72.25:0,72,1270	0/0:18,0:18:54.18:0,54,928	0/0:25,0:25:72.25:0,72,1268	0/0:26,0:26:75.26:0,75,1311	0/0:30,0:30:90.26:0,90,1493	0/0:29,0:29:84.27:0,84,1448	1/1:1,29:30:81.28:1914,81,0	0/0:29,0:29:87.27:0,87,1477	0/0:27,0:27:81.22:0,81,1358	0/0:15,0:15:39.13:0,39,688	1/1:2,24:27:78.23:1715,78,0	1/1:2,25:28:63.22:1489,63,0	1/1:3,7:11:15.05:354,15,0	0/0:21,0:21:60.21:0,60,1049	0/0:27,0:27:78.25:0,78,1346	0/0:12,0:12:36.12:0,36,635	0/0:21,0:21:57.20:0,57,1003	0/0:20,0:20:60.21:0,60,1059	1/1:2,22:24:63.22:1476,63,0	0/0:13,0:13:39.13:0,39,688
chr10	32368248	.	C	CA	3955.59	PASS	AB=0.926;AC=13;AF=0.232;AN=56;BaseQRankSum=-11.541;DP=653;FS=8.711;HRun=10;HaplotypeScore=66.0868;InbreedingCoeff=0.8887;MQ=74.67;MQ0=0;MQRankSum=0.016;QD=19.49;ReadPosRankSum=-1.279;VQSLOD=3.7553;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:26:67.93:0,68,547	0/0:18,0:18:47.91:0,48,389	0/0:22,0:25:24.95:0,25,241	0/0:8,0:9:13.74:0,14,100	0/0:26,0:26:59.89:0,60,492	0/0:27,0:29:63.94:0,64,504	0/1:23,2:25:10.07:10,0,337	1/1:8,21:29:16.83:566,17,0	0/0:21,0:22:55.94:0,56,449	0/0:34,0:34:95.64:0,96,776	0/0:21,0:22:55.97:0,56,449	0/0:30,0:32:63.96:0,64,498	0/0:28,0:29:76.94:0,77,621	0/0:17,0:19:39.13:0,39,302	1/1:4,29:33:78.20:832,78,0	0/0:24,0:24:56.92:0,57,468	0/0:19,0:19:50.88:0,51,410	0/0:11,0:11:29.87:0,30,246	1/1:3,23:27:65.25:704,65,0	1/1:10,22:34:59.91:598,60,0	1/1:4,16:21:38.26:442,38,0	0/0:22,0:22:50.93:0,51,419	0/0:15,0:15:41.94:0,42,345	0/0:11,0:11:23.93:0,24,194	0/0:23,0:23:56.91:0,57,464	0/0:30,1:31:42.91:0,43,559	1/1:4,28:34:59.24:804,59,0	0/0:2,0:3:8.03:0,8,55
chr10	32369397	.	T	TC	62.77	PASS	AB=0.738;AC=22;AF=0.579;AN=38;BaseQRankSum=-0.070;DP=143;FS=0.000;HRun=0;HaplotypeScore=277.9393;InbreedingCoeff=0.1822;MQ=30.93;MQ0=0;MQRankSum=0.962;QD=0.51;ReadPosRankSum=-0.105;VQSLOD=1.5752;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	1/1:6,3:9:5.48:17,5,0	./.	./.	0/1:5,5:10:1.76:8,0,2	0/0:2,1:3:1.74:0,2,6	./.	0/0:1,0:1:1.82:0,2,5	./.	0/0:3,5:8:1.76:0,2,6	1/1:8,3:11:4.71:21,5,0	./.	1/1:3,2:5:4.50:16,4,0	0/0:2,1:3:2.70:0,3,7	1/1:1,1:2:2.68:11,3,0	0/0:0,1:1:0.89:0,1,2	./.	./.	1/1:2,0:2:4.22:24,4,0	0/1:21,3:24:2.97:3,0,9	./.	0/1:11,10:21:10.68:11,0,11	0/1:7,4:11:1.66:16,0,2	1/1:0,1:1:0.47:1,0,0	1/1:6,5:11:1.15:13,1,0	0/1:6,4:10:0:1,0,0	0/1:2,1:3:2.41:2,0,8	1/1:1,2:3:5.24:21,5,0
chr10	32371706	.	ACT	A	2726.44	PASS	AB=0.889;AC=16;AF=0.286;AN=56;BaseQRankSum=8.143;DP=503;FS=28.488;HRun=0;HaplotypeScore=71.3870;InbreedingCoeff=0.6685;MQ=81.29;MQ0=1;MQRankSum=0.075;QD=14.74;ReadPosRankSum=-1.263;VQSLOD=1.5534;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,2:30:2.15:0,2,1000	0/0:7,0:7:15.05:0,15,242	0/0:25,1:20:31.20:0,31,350	0/0:33,1:25:33.20:0,33,382	0/0:21,1:22:17.89:0,18,758	0/0:26,0:26:72.25:0,72,1160	0/1:15,1:16:0.28:0,0,494	1/1:18,24:43:72.04:839,72,0	0/0:11,0:11:33.10:0,33,508	0/0:30,0:30:81.26:0,81,1264	0/0:16,0:16:36.11:0,36,556	0/0:9,0:9:21.07:0,21,339	0/0:15,0:15:36.12:0,36,581	0/1:14,1:15:3.24:3,0,449	1/1:3,11:14:30.09:364,30,0	0/0:12,0:12:36.12:0,36,581	0/0:15,0:15:42.14:0,42,667	0/1:4,1:5:21.36:21,0,179	1/1:10,18:30:59.79:672,60,0	1/1:5,6:12:18.05:218,18,0	1/1:4,6:11:15.04:182,15,0	0/0:10,0:10:21.07:0,21,337	0/0:12,0:12:29.89:0,30,484	0/0:8,0:8:12.04:0,12,194	0/1:13,3:16:67.09:67,0,467	0/0:18,0:18:45.15:0,45,723	1/1:6,17:23:45.14:546,45,0	0/0:17,0:17:33.04:0,33,502
chr10	32372032	.	A	AATAT	7290.10	PASS	AB=0.711;AC=46;AF=0.885;AN=52;BaseQRankSum=-2.632;DP=277;FS=1.608;HRun=0;HaplotypeScore=52.7798;InbreedingCoeff=0.1593;MQ=69.27;MQ0=0;MQRankSum=0.199;QD=28.15;ReadPosRankSum=2.075;VQSLOD=4.4677;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:11,7:22:11.81:668,0,12	1/1:1,1:2:3.01:75,3,0	0/1:4,0:2:0:0,0,0	0/0:15,0:9:5.94:0,6,71	1/1:5,7:12:12.04:298,12,0	0/1:7,7:19:24.62:323,0,25	1/1:3,2:5:6.02:149,6,0	1/1:24,0:25:34.76:393,35,0	1/1:1,1:4:8.75:112,9,0	1/1:5,0:9:11.57:112,12,0	1/1:2,2:5:8.82:162,9,0	1/1:5,2:8:14.19:185,14,0	1/1:5,2:7:6.02:149,6,0	1/1:7,3:10:12:196,12,0	1/1:7,0:7:5.97:46,6,0	1/1:4,7:12:19.31:453,19,0	1/1:3,11:16:8.68:599,9,0	1/1:5,2:8:8.77:161,9,0	1/1:12,1:16:14.85:292,15,0	1/1:3,0:7:18.03:273,18,0	./.	./.	1/1:2,3:5:9.03:224,9,0	1/1:1,1:2:3.01:75,3,0	0/1:3,10:13:29.58:427,0,30	1/1:3,12:16:38.92:867,39,0	1/1:9,4:17:32.46:653,32,0	1/1:1,6:8:20.54:398,21,0
chr10	32372089	.	T	TGATAGA	1333.71	PASS	AB=0.838;AC=17;AF=0.304;AN=56;BaseQRankSum=5.841;DP=348;FS=2.757;HRun=0;HaplotypeScore=105.1156;InbreedingCoeff=-0.2938;MQ=69.90;MQ0=4;MQRankSum=-4.446;QD=7.17;ReadPosRankSum=-2.308;VQSLOD=1.8969;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:9:17.73:0,18,197	0/1:6,1:13:99:151,0,221	0/0:17,0:16:45.14:0,45,688	0/0:8,0:5:15.05:0,15,233	0/0:15,0:15:30.07:0,30,500	0/0:14,0:14:36.11:0,36,670	0/0:5,0:4:12.04:0,12,195	0/0:33,0:32:34.53:0,35,1318	0/0:11,0:11:30.06:0,30,646	0/0:12,0:12:33.10:0,33,604	0/0:12,0:12:24.08:0,24,530	0/1:8,2:11:35.73:36,0,260	0/1:2,0:8:28.98:29,0,85	0/1:16,0:16:99:151,0,198	0/1:3,0:8:43.50:43,0,128	0/0:10,0:10:27.09:0,27,627	0/1:15,0:19:43.42:43,0,684	0/1:12,0:12:9.58:10,0,646	0/1:12,0:11:85.58:86,0,270	0/1:5,0:5:52.79:53,0,87	0/1:11,0:11:46.46:46,0,85	0/1:10,0:11:88.64:110,0,89	0/1:8,0:8:76.42:136,0,76	1/1:7,0:7:5.84:34,6,0	0/0:15,0:15:42.12:0,42,776	0/1:12,0:14:99:155,0,377	0/1:11,1:23:99:330,0,314	0/1:4,0:8:30.81:82,0,31
chr10	32375276	.	AT	A	3126.60	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=11.640;DP=626;FS=0.361;HRun=10;HaplotypeScore=59.7190;InbreedingCoeff=0.9918;MQ=74.86;MQ0=0;MQRankSum=-1.442;QD=19.30;ReadPosRankSum=-1.158;VQSLOD=3.9815;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:23.18:0,23,693	0/0:10,0:11:29.91:0,30,313	0/0:17,0:17:28.85:0,29,285	0/0:15,0:14:14.59:0,15,219	0/0:27,0:27:75.19:0,75,822	0/0:19,0:19:54.09:0,54,564	0/0:13,1:14:16.06:0,16,405	1/1:4,33:37:92.91:796,93,0	0/0:23,0:23:60.16:0,60,664	0/0:23,0:23:57.15:0,57,630	0/0:24,0:24:66.18:0,66,730	0/0:14,0:14:30.08:0,30,332	0/0:32,0:32:93.25:0,93,1029	0/0:13,0:13:36.10:0,36,398	1/1:1,25:26:68.98:599,69,0	0/0:33,0:33:87.22:0,87,954	0/0:27,0:27:69.18:0,69,755	0/0:10,0:10:24.06:0,24,265	1/1:10,17:27:50.92:435,51,0	1/1:1,25:26:68.97:599,69,0	1/1:0,16:16:41.99:365,42,0	0/0:29,0:29:72.18:0,72,786	0/0:26,0:26:78.21:0,78,860	0/0:24,0:24:69.13:0,69,749	0/0:28,0:28:78.21:0,78,863	0/0:18,0:18:48.08:0,48,509	1/1:7,23:30:59.97:521,60,0	0/0:7,0:7:21.06:0,21,232
chr10	32376065	.	T	TGGC	22074.07	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-4.155;DP=769;FS=18.822;HRun=0;HaplotypeScore=161.8994;InbreedingCoeff=0.9942;MQ=83.44;MQ0=0;MQRankSum=-6.834;QD=40.35;ReadPosRankSum=6.297;VQSLOD=4.0608;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,53:56:75.26:1613,75,0	1/1:1,11:12:24.08:542,24,0	0/0:21,0:21:51.11:0,51,718	0/0:31,0:31:79.86:0,80,956	1/1:5,29:37:53.67:934,54,0	1/1:2,16:18:30.10:662,30,0	1/1:0,25:26:66.23:1453,66,0	0/0:32,0:32:79.11:0,79,1179	1/1:2,25:27:63.22:1419,63,0	1/1:5,28:35:83.66:1294,84,0	1/1:3,18:21:29.93:624,30,0	1/1:2,27:29:65.90:1482,66,0	1/1:4,26:30:60.21:1348,60,0	1/1:3,26:29:57.20:1281,57,0	0/0:36,0:36:84.17:0,84,1241	1/1:1,25:27:62.80:1418,63,0	1/1:1,34:35:81.28:1800,81,0	1/1:1,14:14:30.10:678,30,0	0/0:17,0:17:41.52:0,42,516	0/0:29,0:29:69.65:0,70,1012	0/0:27,0:27:75.20:0,75,1121	1/1:4,23:27:33.11:727,33,0	1/1:1,19:22:42.14:880,42,0	1/1:1,37:40:87.30:1967,87,0	1/1:5,23:28:33.11:731,33,0	1/1:2,24:27:59.62:950,60,0	0/0:29,0:29:75.15:0,75,1122	1/1:0,5:5:12.04:271,12,0
chr10	32376375	.	AT	A	13236.32	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-3.948;DP=580;FS=2.459;HRun=2;HaplotypeScore=98.1467;InbreedingCoeff=0.9913;MQ=77.40;MQ0=0;MQRankSum=-2.508;QD=32.21;ReadPosRankSum=4.349;VQSLOD=4.6771;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,20:20:51.17:662,51,0	1/1:0,5:5:15.05:192,15,0	0/0:13,0:13:33.07:0,33,443	0/0:14,0:14:21.09:0,21,429	1/1:0,21:21:57.16:702,57,0	1/1:2,18:20:51.16:651,51,0	1/1:0,19:19:51.17:662,51,0	0/0:26,0:26:78.23:0,78,1144	1/1:0,28:28:66.21:857,66,0	1/1:1,28:29:84.03:1027,84,0	1/1:0,15:15:39.12:495,39,0	1/1:0,18:18:42.14:545,42,0	1/1:0,28:28:78.25:1013,78,0	1/1:0,25:25:60.20:779,60,0	0/0:33,0:33:96.32:0,96,1428	1/1:0,23:23:63.20:818,63,0	1/1:0,26:26:66.21:857,66,0	1/1:1,17:18:39.13:505,39,0	0/0:21,0:21:63.21:0,63,924	0/0:22,0:22:66.20:0,66,946	0/0:10,0:10:30.10:0,30,447	1/1:0,15:15:33.10:408,33,0	1/1:0,16:16:33.11:427,33,0	1/1:0,20:20:51.16:657,51,0	1/1:1,29:30:63.20:818,63,0	1/1:2,26:28:78.25:1007,78,0	0/0:30,0:28:84.28:0,84,1211	1/1:1,6:7:12.04:155,12,0
chr10	32378159	.	AAAATAAAT	A	4563.74	PASS	AC=44;AF=0.917;AN=48;BaseQRankSum=3.350;DP=293;FS=8.963;HRun=0;HaplotypeScore=70.4591;InbreedingCoeff=0.3094;MQ=49.43;MQ0=4;MQRankSum=-1.313;QD=17.97;ReadPosRankSum=0.935;VQSLOD=2.5826;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	1/1:2,6:8:9.03:230,9,0	0/0:6,0:2:6.02:0,6,240	./.	1/1:5,12:17:14.98:324,15,0	1/1:3,14:17:21.03:479,21,0	1/1:5,0:5:2.91:18,3,0	1/1:25,14:39:32.88:371,33,0	1/1:4,4:8:3.01:77,3,0	1/1:7,8:15:24.07:525,24,0	./.	1/1:3,6:9:9.03:230,9,0	1/1:7,2:9:6.02:153,6,0	1/1:6,3:9:6.02:153,6,0	0/0:9,0:9:6.02:0,6,219	1/1:2,1:3:3.01:77,3,0	1/1:4,10:13:6.02:153,6,0	1/1:12,3:15:5.95:132,6,0	1/1:10,12:20:33.07:637,33,0	1/1:5,0:5:3.01:74,3,0	./.	1/1:4,0:4:2.99:24,3,0	1/1:9,0:9:5.80:32,6,0	1/1:3,2:5:3.01:76,3,0	1/1:5,6:11:3.01:77,3,0	1/1:4,12:16:32.92:473,33,0	1/1:5,6:11:9:174,9,0	1/1:1,2:3:3.01:77,3,0
chr10	32378422	.	GGTTACCCTAAT	G	26717.02	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=7.158;DP=400;FS=2.482;HRun=0;HaplotypeScore=152.5953;InbreedingCoeff=0.7955;MQ=82.83;MQ0=0;MQRankSum=-12.108;QD=80.47;ReadPosRankSum=3.609;VQSLOD=4.5409;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,12:14:30.10:1019,30,0	1/1:0,3:3:6.02:214,6,0	0/0:21,0:21:57.19:0,57,2469	0/0:14,0:14:36.12:0,36,1343	1/1:0,10:10:24.08:821,24,0	1/1:1,18:19:48.16:1712,48,0	1/1:3,11:14:27.09:963,27,0	1/1:4,18:22:54.19:1858,54,0	1/1:3,15:18:42.14:1499,42,0	1/1:2,12:14:39.13:1286,39,0	1/1:0,8:8:21.07:730,21,0	1/1:3,21:24:51.18:1819,51,0	1/1:2,17:19:51.18:1819,51,0	1/1:2,17:19:48.16:1712,48,0	0/0:33,0:33:96.32:0,96,5284	1/1:2,20:22:57.20:2034,57,0	1/1:5,6:11:15.05:535,15,0	1/1:0,6:6:15.05:535,15,0	1/1:4,12:16:33.11:1120,33,0	1/1:0,7:6:18.06:623,18,0	1/1:4,9:13:18.06:642,18,0	1/1:1,4:5:9.03:321,9,0	1/1:1,2:3:6.02:178,6,0	1/1:4,2:6:2.34:106,2,0	1/1:0,5:5:9.03:321,9,0	1/1:2,13:15:36.12:1210,36,0	1/1:3,34:37:96.18:3425,96,0	1/1:0,2:2:6.02:214,6,0
chr10	32381316	.	A	AT	222.55	PASS	AB=0.689;AC=12;AF=0.400;AN=30;BaseQRankSum=2.897;DP=163;DS;FS=28.628;HRun=0;HaplotypeScore=26.5029;InbreedingCoeff=0.2729;MQ=86.12;MQ0=18;MQRankSum=-3.399;QD=6.95;ReadPosRankSum=-1.983;VQSLOD=1.0042;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,2:3:3.01:48,3,0	./.	0/0:28,0:16:39.99:0,40,508	0/0:33,0:23:66.14:0,66,839	./.	1/1:2,1:1:3.01:48,3,0	./.	./.	./.	0/0:1,0:1:3.01:0,3,40	1/1:1,1:2:3.01:48,3,0	0/1:5,1:5:32.13:42,0,32	./.	0/1:2,3:4:29.12:86,0,29	0/0:30,1:30:33.53:0,34,1040	1/1:3,1:4:3.01:48,3,0	./.	./.	./.	./.	0/0:2,0:2:3:0,3,25	./.	0/0:5,0:3:3.01:0,3,38	0/0:6,0:4:3.01:0,3,37	./.	./.	0/0:4,0:3:2.74:0,3,12	1/1:4,1:2:4.53:15,5,0
chr10	32387364	.	CT	C	6445.14	PASS	AB=1.000;AC=48;AF=0.857;AN=56;BaseQRankSum=7.145;DP=554;FS=0.554;HRun=8;HaplotypeScore=121.7259;InbreedingCoeff=0.7942;MQ=73.30;MQ0=0;MQRankSum=-4.542;QD=12.76;ReadPosRankSum=5.102;VQSLOD=3.6850;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:37,0:37:56.45:316,56,0	1/1:8,0:8:13.47:61,13,0	0/0:15,0:15:29.67:0,30,313	0/0:14,0:13:20.92:0,21,211	1/1:21,0:21:34.01:192,34,0	1/1:20,0:20:26.84:180,27,0	1/1:13,0:13:32.29:136,32,0	1/1:1,32:33:96.02:891,96,0	1/1:15,0:15:34.69:143,35,0	1/1:26,0:26:10.98:173,11,0	1/1:32,0:32:71.33:371,71,0	1/1:8,0:8:18.59:78,19,0	1/1:22,0:22:23.29:162,23,0	1/1:15,1:16:43.23:210,43,0	0/0:20,0:20:54.17:0,54,652	1/1:17,0:17:40.27:169,40,0	1/1:20,0:20:43.42:196,43,0	0/1:26,0:26:2.10:180,0,2	1/1:1,14:15:42.05:399,42,0	1/1:3,25:28:75.05:713,75,0	1/1:0,12:12:36.06:348,36,0	1/1:16,0:16:40.68:199,41,0	1/1:20,0:20:20.91:192,21,0	1/1:14,0:14:33.14:160,33,0	1/1:21,0:21:23.86:196,24,0	1/1:30,0:30:46.37:270,46,0	1/1:3,14:17:39.06:376,39,0	0/1:18,0:18:0.43:136,0,0
chr10	32387372	.	TA	T	13014.02	PASS	AB=1.000;AC=47;AF=0.839;AN=56;BaseQRankSum=4.189;DP=567;FS=5.171;HRun=3;HaplotypeScore=104.0139;InbreedingCoeff=0.5987;MQ=75.22;MQ0=0;MQRankSum=-4.146;QD=24.98;ReadPosRankSum=5.643;VQSLOD=3.8056;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,34:35:84.26:1034,84,0	1/1:1,6:7:15.05:180,15,0	0/0:12,0:13:35.86:0,36,396	0/0:15,0:14:26.49:0,26,304	1/1:2,20:22:60.07:701,60,0	1/1:0,25:25:54.17:666,54,0	1/1:0,17:17:36.11:444,36,0	1/1:32,0:32:21.32:58,21,0	1/1:0,15:15:39.12:481,39,0	1/1:1,28:29:84.18:960,84,0	1/1:0,34:34:96.04:1068,96,0	1/1:0,7:7:21.07:259,21,0	1/1:1,20:21:51.16:629,51,0	1/1:1,17:18:48.02:566,48,0	0/0:18,0:18:54.18:0,54,747	1/1:0,18:18:45.14:555,45,0	1/1:0,22:22:48.15:591,48,0	1/1:2,19:21:57.18:702,57,0	0/1:18,0:18:14.70:15,0,83	1/1:27,0:27:8.06:99,8,0	0/1:14,0:14:17.52:18,0,27	1/1:0,15:15:45.14:553,45,0	1/1:1,22:23:56.99:630,57,0	1/1:1,13:14:39.09:464,39,0	1/1:2,18:20:57.16:689,57,0	1/1:1,29:30:87.24:1046,87,0	0/1:18,0:18:14.98:15,0,69	1/1:2,17:19:48.15:592,48,0
chr10	32388117	.	T	TAG	32610.55	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=5.890;DP=795;FS=21.780;HRun=0;HaplotypeScore=139.5785;InbreedingCoeff=0.9889;MQ=84.00;MQ0=2;MQRankSum=-10.734;QD=45.93;ReadPosRankSum=4.640;VQSLOD=3.7648;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,26:31:66.23:1253,66,0	1/1:2,13:15:30.10:579,30,0	0/0:28,0:29:84.19:0,84,1222	0/0:24,0:24:62.78:0,63,919	1/1:4,25:31:68.97:1214,69,0	1/1:4,32:36:87.30:1679,87,0	1/1:4,26:30:75.26:1435,75,0	1/1:3,28:32:90.25:1656,90,0	1/1:3,22:25:60.21:1158,60,0	1/1:5,26:32:84.24:1508,84,0	1/1:5,25:30:57.20:1100,57,0	1/1:3,29:32:81.28:1563,81,0	1/1:3,32:35:99:1964,102,0	1/1:3,34:37:99:1911,99,0	0/0:32,0:32:96.31:0,96,1432	1/1:2,25:27:72.25:1372,72,0	1/1:1,30:32:84.29:1622,84,0	1/1:1,26:27:75.26:1448,75,0	1/1:3,17:21:60.13:1073,60,0	1/1:4,32:37:78.26:1394,78,0	1/1:1,27:28:62.51:1196,63,0	1/1:1,22:27:66.06:1155,66,0	1/1:4,20:24:44.57:846,45,0	1/1:2,22:25:57.20:1101,57,0	1/1:5,20:25:48.16:926,48,0	1/1:3,24:27:72.20:1324,72,0	1/1:0,35:36:99:1901,99,0	1/1:2,4:5:12.04:232,12,0
chr10	32389159	.	GT	G	1668.16	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=-6.497;DP=414;FS=31.611;HRun=4;HaplotypeScore=79.3816;InbreedingCoeff=0.8101;MQ=72.47;MQ0=0;MQRankSum=1.959;QD=18.33;ReadPosRankSum=-1.529;VQSLOD=1.5816;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:9.74:0,10,97	0/0:8,0:8:19.91:0,20,101	0/1:15,0:13:7.02:7,0,75	0/0:17,0:17:34.54:0,35,424	0/0:32,0:32:51.08:0,51,230	0/0:10,0:10:28.35:0,28,142	0/0:10,0:10:24.22:0,24,115	1/1:1,19:20:60.14:699,60,0	0/0:9,0:9:19.59:0,20,95	0/0:20,0:20:28.71:0,29,201	0/0:22,0:22:39.80:0,40,200	0/0:16,0:16:22.07:0,22,171	0/0:16,0:16:45.26:0,45,229	0/0:14,0:14:25.83:0,26,136	0/0:15,0:15:35.88:0,36,409	0/0:16,0:16:23.78:0,24,140	0/0:8,0:8:14.45:0,14,64	0/0:3,0:3:8.35:0,8,41	1/1:0,7:7:21.06:250,21,0	1/1:1,25:26:27.07:321,27,0	1/1:2,8:10:20.58:247,21,0	0/0:22,0:22:55.76:0,56,255	0/0:20,2:22:4.52:0,5,133	0/0:5,0:5:8.37:0,8,47	0/0:18,0:18:39.67:0,40,195	0/0:22,0:22:50.36:0,50,244	1/1:0,13:13:27.04:318,27,0	0/0:3,0:3:5.54:0,6,25
chr10	32390935	.	C	CAA	31099.49	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-11.113;DP=676;FS=5.119;HRun=1;HaplotypeScore=70.3526;InbreedingCoeff=0.9994;MQ=89.78;MQ0=0;MQRankSum=-10.044;QD=51.49;ReadPosRankSum=5.227;VQSLOD=4.7130;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,23:24:69.24:1333,69,0	1/1:0,13:13:39.13:754,39,0	0/0:20,0:20:57.07:0,57,817	0/0:31,0:31:90.14:0,90,1259	1/1:2,30:34:90.22:1658,90,0	1/1:1,35:36:93.32:1797,93,0	1/1:0,20:21:51.17:985,51,0	1/1:1,36:39:99:2057,117,0	1/1:2,17:19:54.14:1005,54,0	1/1:1,26:27:81.28:1540,81,0	1/1:4,33:37:99:1839,102,0	1/1:1,14:15:33.08:601,33,0	1/1:2,36:38:99:2049,108,0	1/1:0,20:20:54.19:1043,54,0	0/0:21,0:21:63.19:0,63,918	1/1:0,21:22:53.81:1043,54,0	1/1:0,15:15:45.15:869,45,0	1/1:0,10:10:27.09:522,27,0	1/1:1,18:19:57.20:1076,57,0	1/1:1,33:35:99:1823,102,0	1/1:0,38:38:99:1971,102,0	1/1:1,13:14:36.08:657,36,0	1/1:1,22:25:59.63:1110,60,0	1/1:0,24:24:66.23:1275,66,0	1/1:0,13:13:39.13:754,39,0	1/1:1,22:25:72.21:1293,72,0	1/1:3,25:27:69.19:1295,69,0	1/1:0,13:13:39.13:753,39,0
chr10	32393236	.	G	GT	10110.94	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-10.454;DP=580;FS=0.000;HRun=9;HaplotypeScore=59.8366;InbreedingCoeff=0.9955;MQ=75.21;MQ0=0;MQRankSum=-2.085;QD=25.53;ReadPosRankSum=4.031;VQSLOD=5.3209;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,16:20:42.11:463,42,0	1/1:0,5:6:17.88:180,18,0	0/0:23,1:23:41.99:0,42,425	0/0:12,0:12:17.98:0,18,156	1/1:4,24:29:75.08:793,75,0	1/1:3,24:27:69.19:763,69,0	1/1:3,13:16:33.04:351,33,0	0/0:34,0:34:83.96:0,84,726	1/1:3,8:11:26.29:273,26,0	1/1:4,13:17:39.09:421,39,0	1/1:1,21:22:54.11:584,54,0	1/1:1,18:19:47.49:506,47,0	1/1:2,20:22:57.15:631,57,0	1/1:3,20:23:51.10:550,51,0	0/0:23,0:23:59.96:0,60,517	1/1:5,19:24:54.15:597,54,0	1/1:3,20:23:51.80:623,52,0	1/1:0,11:11:27.07:299,27,0	0/0:16,0:16:22.29:0,22,315	0/0:22,0:22:56.98:0,57,495	0/0:15,0:15:35.99:0,36,313	1/1:0,20:20:54.10:576,54,0	1/1:6,25:32:44.95:702,45,0	1/1:1,10:11:24.06:265,24,0	1/1:1,29:30:69.19:763,69,0	1/1:5,15:20:36.22:507,36,0	0/0:37,0:38:99:0,101,865	1/1:3,10:13:24.06:266,24,0
chr10	32393867	.	G	GAA	3476.10	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-10.732;DP=643;FS=6.271;HRun=9;HaplotypeScore=77.2092;InbreedingCoeff=0.9847;MQ=72.14;MQ0=0;MQRankSum=-1.848;QD=28.49;ReadPosRankSum=-6.165;VQSLOD=2.1337;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:26:56.99:0,57,650	0/0:8,0:8:24.06:0,24,255	0/0:18,0:17:30:0,30,304	0/0:17,0:15:23:0,23,197	0/0:31,0:31:81.11:0,81,843	0/0:13,0:13:30.06:0,30,319	0/0:33,0:33:90.20:0,90,950	1/1:13,31:46:99:1331,102,0	0/0:21,0:21:53.48:0,53,551	0/0:32,0:32:69.73:0,70,913	0/0:23,0:23:51.01:0,51,542	0/0:21,0:22:53.86:0,54,555	0/0:26,0:26:75.15:0,75,781	0/0:20,0:20:54.13:0,54,574	0/0:22,0:22:63.14:0,63,670	0/0:29,0:29:84.18:0,84,878	0/0:33,0:33:90.19:0,90,948	0/0:17,0:17:38.97:0,39,388	1/1:3,14:17:41.80:601,42,0	1/1:6,18:25:53.99:702,54,0	1/1:2,2:5:9.03:121,9,0	0/0:24,0:25:60.10:0,60,693	0/0:29,0:29:75.11:0,75,773	0/0:14,0:14:39.08:0,39,407	0/0:28,0:28:81.13:0,81,828	0/0:24,0:24:59.71:0,60,616	1/1:6,19:29:47.92:721,48,0	0/0:10,0:10:27.06:0,27,287
chr10	32394316	.	CAAAA	C	2439.21	PASS	AB=0.615;AC=38;AF=0.679;AN=56;BaseQRankSum=0.642;DP=439;FS=0.565;HRun=14;HaplotypeScore=95.9795;InbreedingCoeff=0.6224;MQ=53.69;MQ0=11;MQRankSum=-3.236;QD=8.38;ReadPosRankSum=7.697;VQSLOD=-0.5834;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:9,16:26:8.69:80,0,9	1/1:4,4:8:11.19:168,11,0	0/0:20,0:12:30.10:0,30,641	0/0:20,0:9:26.95:0,27,446	1/1:5,12:17:1.11:65,1,0	1/1:5,10:15:8.96:105,9,0	1/1:4,9:13:7.36:162,7,0	0/0:15,0:28:72.67:0,73,1307	1/1:2,5:7:7.02:81,7,0	1/1:15,9:23:27.50:384,27,0	1/1:4,4:7:2.60:42,3,0	1/1:2,19:21:18:248,18,0	1/1:6,9:15:2.74:80,3,0	1/1:7,9:16:3.49:58,3,0	0/0:18,0:18:39.13:0,39,774	1/1:4,8:12:3.97:98,4,0	1/1:6,13:17:17.97:207,18,0	1/1:0,3:3:3.01:42,3,0	0/0:7,0:7:15.05:0,15,338	0/0:14,0:15:39.13:0,39,696	0/0:5,0:12:19.48:0,19,276	1/1:5,11:16:3.37:69,3,0	1/1:2,10:12:3.80:59,4,0	0/1:6,9:15:0.12:38,0,0	1/1:3,12:15:9.72:123,10,0	1/1:8,12:21:35.11:434,35,0	0/0:22,0:24:63.16:0,63,1135	1/1:2,5:6:6.02:85,6,0
chr10	32394778	.	T	TTAAAACTATGG	42649.18	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-7.794;DP=626;FS=0.000;HRun=0;HaplotypeScore=171.3428;InbreedingCoeff=0.9744;MQ=78.35;MQ0=0;MQRankSum=-15.917;QD=98.50;ReadPosRankSum=0.672;VQSLOD=4.5714;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,17:32:57.20:3008,57,0	1/1:4,9:13:33.11:1709,33,0	0/0:26,0:26:57.19:0,57,1544	0/0:17,0:17:32.21:0,32,804	1/1:11,14:26:54.19:2845,54,0	1/1:10,15:28:51.18:2759,51,0	1/1:10,9:20:30.10:1582,30,0	0/0:32,0:32:63.18:0,63,1648	1/1:7,6:13:27.09:1470,27,0	1/1:14,8:25:54.08:2368,54,0	1/1:12,15:30:60.21:3045,60,0	1/1:6,18:27:60.21:3267,60,0	1/1:16,13:30:42.06:2263,42,0	1/1:10,12:23:42.14:2150,42,0	0/0:19,0:19:42.14:0,42,1406	1/1:9,13:24:51.18:2696,51,0	1/1:8,8:16:30.10:1552,30,0	1/1:5,2:9:6.02:332,6,0	0/0:10,0:10:30.10:0,30,789	0/0:36,0:36:99:0,99,3136	0/0:25,0:25:60.21:0,60,1925	1/1:7,14:23:48.16:2617,48,0	1/1:10,17:32:56.74:2893,57,0	1/1:6,4:12:15.05:664,15,0	1/1:8,10:19:45.15:2354,45,0	1/1:11,9:23:57.17:2443,57,0	0/0:28,0:28:66.23:0,66,2119	1/1:3,5:8:12.04:632,12,0
chr10	32395788	.	A	ATGG	7331.29	PASS	AB=0.714;AC=39;AF=0.696;AN=56;BaseQRankSum=1.163;DP=502;FS=2.966;HRun=0;HaplotypeScore=176.3047;InbreedingCoeff=0.7427;MQ=68.08;MQ0=2;MQRankSum=-2.607;QD=21.69;ReadPosRankSum=2.006;VQSLOD=4.4963;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:18,9:27:30.10:593,30,0	0/1:3,2:5:29.44:165,0,29	0/0:27,0:21:11.72:0,12,161	0/0:23,0:21:2.93:0,3,153	1/1:13,3:16:12.04:235,12,0	1/1:14,8:22:30.06:538,30,0	1/1:8,8:16:30.06:554,30,0	0/0:21,0:21:12.04:0,12,166	1/1:11,6:17:30.06:525,30,0	1/1:14,2:16:8.24:126,8,0	1/1:14,2:16:3.01:59,3,0	1/1:9,11:20:48.16:928,48,0	1/1:15,8:22:30.10:592,30,0	1/1:9,12:21:45.11:818,45,0	0/0:22,0:22:33.09:0,33,425	1/1:10,10:20:33.07:613,33,0	1/1:11,11:21:33.09:611,33,0	1/1:4,0:4:9.02:130,9,0	0/0:20,0:20:24.08:0,24,327	0/0:19,0:19:12.03:0,12,154	0/0:22,0:22:17.94:0,18,215	1/1:18,1:19:6.02:118,6,0	1/1:15,1:16:3.01:53,3,0	1/1:14,3:17:9.03:179,9,0	1/1:11,2:13:12:182,12,0	1/1:19,0:19:6.02:75,6,0	0/0:10,0:10:21.07:0,21,290	1/1:5,4:9:12.04:237,12,0
chr10	32395966	.	GA	G	14317.78	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=9.695;DP=649;FS=1.438;HRun=5;HaplotypeScore=64.9841;InbreedingCoeff=0.9902;MQ=76.04;MQ0=0;MQRankSum=-3.827;QD=30.99;ReadPosRankSum=6.276;VQSLOD=4.8877;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,23:23:63.18:714,63,0	1/1:1,4:5:9.03:102,9,0	0/0:28,0:27:72.23:0,72,954	0/0:18,0:18:48.16:0,48,645	1/1:1,30:31:87.25:984,87,0	1/1:0,16:16:45.13:509,45,0	1/1:1,17:18:45.13:510,45,0	0/0:37,0:36:99:0,108,1432	1/1:3,20:23:57.16:646,57,0	1/1:1,24:25:72.20:817,72,0	1/1:1,14:15:39.11:442,39,0	1/1:0,27:27:72.21:816,72,0	1/1:3,38:41:99:1259,111,0	1/1:0,35:35:99:1122,99,0	0/0:26,0:26:78.23:0,78,1033	1/1:0,25:25:72.21:816,72,0	1/1:1,30:31:81.23:918,81,0	1/1:0,11:11:33.09:374,33,0	0/0:13,0:13:39.13:0,39,531	0/0:20,0:20:60.20:0,60,820	0/0:16,0:16:42.13:0,42,558	1/1:1,27:28:75.21:851,75,0	1/1:1,17:18:51.15:579,51,0	1/1:0,21:21:54.15:612,54,0	1/1:0,14:14:39.11:442,39,0	1/1:2,31:33:93.26:1055,93,0	0/0:29,0:29:75.21:0,75,1004	1/1:0,22:22:66.19:749,66,0
chr10	32396659	.	T	TAC	4264.41	PASS	AB=0.817;AC=27;AF=0.482;AN=56;BaseQRankSum=-3.687;DP=636;FS=0.591;HRun=0;HaplotypeScore=125.0041;InbreedingCoeff=-0.1038;MQ=58.37;MQ0=13;MQRankSum=2.412;QD=8.36;ReadPosRankSum=-0.135;VQSLOD=4.6308;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:20,17:40:90.36:364,0,90	0/1:2,2:4:12.66:82,0,13	0/1:29,0:14:0:0,0,0	0/0:51,0:19:2.29:0,2,7	1/1:9,10:20:12.04:182,12,0	0/1:14,11:26:21.08:124,0,21	0/1:19,9:29:2.58:189,0,3	0/1:12,0:16:0:0,0,0	0/1:15,3:18:50.24:162,0,50	0/1:15,3:18:10.99:199,0,11	0/1:10,2:12:8.85:82,0,9	0/1:17,8:27:78.97:161,0,79	0/1:10,5:15:30.42:121,0,30	1/1:14,1:15:12.01:135,12,0	0/0:12,0:14:24.20:0,24,229	1/1:8,10:18:21.07:318,21,0	0/1:32,10:43:35.36:674,0,35	0/1:14,5:20:62.75:261,0,63	0/0:11,0:14:5.68:0,6,28	0/0:12,0:15:8.49:0,8,42	0/1:23,0:41:0:0,0,0	0/0:13,0:17:17.43:0,17,141	0/1:11,1:11:24.39:57,0,24	0/1:23,20:44:47.38:438,0,47	0/1:21,4:26:39.70:228,0,40	1/1:15,8:24:6.60:377,7,0	0/0:3,0:15:19.89:0,20,98	1/1:10,1:11:13.40:109,13,0
chr10	32396771	.	AT	A	6580.56	PASS	AB=0.573;AC=38;AF=0.679;AN=56;BaseQRankSum=-3.974;DP=490;FS=5.273;HRun=11;HaplotypeScore=81.0254;InbreedingCoeff=0.8130;MQ=69.73;MQ0=5;MQRankSum=1.459;QD=19.13;ReadPosRankSum=5.018;VQSLOD=5.6096;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,24:28:68.90:566,69,0	1/1:0,6:6:14.98:123,15,0	0/0:18,0:14:20.09:0,20,199	0/0:18,0:19:25.64:0,26,245	1/1:4,14:17:3.99:239,4,0	1/1:4,10:14:29.94:246,30,0	1/1:3,12:15:32.95:271,33,0	0/0:9,0:20:38.53:0,39,216	1/1:1,9:9:26.97:222,27,0	1/1:1,20:21:59.93:493,60,0	1/1:2,12:14:26.02:219,26,0	1/1:3,13:16:38.95:320,39,0	1/1:2,10:12:29.95:246,30,0	1/1:5,16:20:47.91:394,48,0	0/0:19,0:18:48.12:0,48,512	1/1:0,15:15:41.95:345,42,0	1/1:1,23:24:65.92:542,66,0	1/1:1,18:18:50.94:419,51,0	0/0:11,0:18:46.33:0,46,311	0/0:6,0:20:39.77:0,40,199	0/0:8,0:14:14.44:0,14,90	1/1:2,16:18:47.92:393,48,0	1/1:1,15:16:10.30:288,10,0	1/1:2,18:20:53.73:443,54,0	1/1:4,13:18:21.06:301,21,0	0/1:9,18:27:15.08:362,0,15	0/0:2,0:15:34.12:0,34,171	0/1:2,9:11:8.01:148,0,8
chr10	32396774	.	T	TC	32.43	PASS	AB=0.900;AC=5;AF=0.089;AN=56;BaseQRankSum=-5.356;DP=488;FS=6.227;HRun=0;HaplotypeScore=107.6010;InbreedingCoeff=0.6603;MQ=66.25;MQ0=9;MQRankSum=0.941;QD=0.65;ReadPosRankSum=-1.462;VQSLOD=1.4043;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:77.44:0,77,565	0/0:6,0:6:14.88:0,15,106	0/0:16,0:12:18.58:0,19,325	0/0:16,0:16:22.14:0,22,391	0/0:18,0:17:41.72:0,42,319	0/0:16,0:16:44.63:0,45,316	0/0:16,0:16:38.71:0,39,281	0/0:20,0:20:1.43:0,1,189	0/0:9,1:9:26.78:0,27,191	0/0:22,0:21:62.52:0,63,453	0/0:14,0:14:35.66:0,36,254	0/0:15,0:15:39.93:0,40,279	0/0:12,0:12:35.74:0,36,259	0/0:19,1:19:56.59:0,57,412	0/0:18,0:17:51.16:0,51,696	0/0:15,0:15:41.66:0,42,297	0/0:24,1:25:65.47:0,65,466	0/0:20,0:19:53.47:0,53,375	0/0:18,0:17:9.13:0,9,219	1/1:17,0:16:16.51:77,17,0	0/0:13,0:13:9.06:0,9,140	0/0:18,0:18:53.36:0,53,375	0/0:19,0:18:41.70:0,42,314	0/0:20,1:21:53.36:0,53,381	0/1:16,2:17:24.96:25,0,246	0/0:30,1:30:48.13:0,48,592	1/1:15,0:14:18.41:56,18,0	0/0:12,0:11:26.84:0,27,216
chr10	32401256	.	ATTTGAAT	A	9562.04	PASS	AC=40;AF=0.800;AN=50;BaseQRankSum=4.171;DP=299;FS=5.324;HRun=0;HaplotypeScore=61.1857;InbreedingCoeff=0.7938;MQ=28.65;MQ0=48;MQRankSum=-4.563;QD=52.25;ReadPosRankSum=1.087;VQSLOD=3.7821;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,4:2:6.02:150,6,0	1/1:2,3:6:12.04:316,12,0	./.	./.	1/1:0,8:8:21.07:434,21,0	1/1:0,10:9:21.07:553,21,0	1/1:0,11:7:12.04:312,12,0	./.	1/1:1,5:6:15.05:395,15,0	1/1:0,8:8:21.07:553,21,0	1/1:1,10:11:27.09:660,27,0	1/1:0,12:12:30.10:750,30,0	1/1:1,14:14:30.10:791,30,0	1/1:0,10:10:27.09:711,27,0	0/0:17,0:15:9.03:0,9,363	1/1:0,13:13:30.10:751,30,0	1/1:1,6:1:3.01:79,3,0	1/1:0,6:3:9.03:237,9,0	0/0:9,0:6:15.05:0,15,585	0/0:12,0:12:14.86:0,15,567	0/0:26,0:15:3.01:0,3,82	1/1:1,8:9:24.08:624,24,0	1/1:0,10:10:21.07:379,21,0	1/1:2,6:5:3.01:79,3,0	1/1:1,11:12:27.09:712,27,0	1/1:0,12:10:30.10:758,30,0	0/0:17,0:15:29.76:0,30,1207	1/1:0,5:5:12.04:316,12,0
chr10	32401951	.	T	TA	19676.68	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-4.809;DP=690;FS=5.439;HRun=6;HaplotypeScore=80.8733;InbreedingCoeff=0.9890;MQ=73.14;MQ0=0;MQRankSum=-8.681;QD=32.10;ReadPosRankSum=3.360;VQSLOD=5.1859;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,25:26:69.18:850,69,0	1/1:1,12:13:36.08:436,36,0	0/0:35,0:35:68.68:0,69,686	0/0:24,0:24:33.77:0,34,508	1/1:5,21:26:60.03:683,60,0	1/1:0,22:22:63.20:792,63,0	1/1:6,25:31:75.24:944,75,0	1/1:7,27:34:50.59:922,51,0	1/1:2,16:18:45.14:566,45,0	1/1:4,31:35:93.24:1138,93,0	1/1:1,18:19:54.17:679,54,0	1/1:2,28:30:72.23:906,72,0	1/1:2,28:30:84.27:1052,84,0	1/1:2,27:29:78.25:981,78,0	0/0:18,0:18:54.12:0,54,551	1/1:3,22:25:63.20:793,63,0	1/1:0,32:32:87.28:1094,87,0	1/1:2,21:23:63.20:793,63,0	1/1:3,26:29:53.65:988,54,0	1/1:0,25:25:72.23:905,72,0	1/1:3,24:27:60.19:755,60,0	1/1:1,17:18:42.05:492,42,0	1/1:1,21:22:60.11:719,60,0	1/1:1,17:18:45.14:566,45,0	1/1:1,20:21:51.12:624,51,0	1/1:3,26:29:78.25:980,78,0	1/1:2,25:27:69.22:868,69,0	1/1:0,4:4:12.04:151,12,0
chr10	32402598	.	G	GAA	12215.51	PASS	AB=0.964;AC=52;AF=0.929;AN=56;BaseQRankSum=-4.374;DP=631;FS=4.588;HRun=12;HaplotypeScore=91.8035;InbreedingCoeff=0.5317;MQ=71.34;MQ0=0;MQRankSum=-2.879;QD=19.86;ReadPosRankSum=0.140;VQSLOD=4.3306;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:11,29:42:23.39:618,23,0	1/1:0,6:8:8.52:93,9,0	0/1:23,0:20:4.53:5,0,221	0/1:15,0:14:11.75:12,0,33	1/1:2,16:21:22.72:512,23,0	1/1:2,8:24:42.06:417,42,0	1/1:6,14:22:35.55:436,36,0	1/1:12,17:32:57.09:722,57,0	1/1:4,15:24:35.04:411,35,0	1/1:9,15:29:56.19:544,56,0	1/1:3,14:17:38.90:435,39,0	1/1:2,16:19:36.02:442,36,0	1/1:9,16:26:18.11:512,18,0	1/1:11,13:28:32.17:389,32,0	0/0:15,0:16:32.85:0,33,352	1/1:8,22:31:47.08:617,47,0	1/1:4,22:30:58.64:723,59,0	1/1:5,6:13:20.55:248,21,0	1/1:9,13:23:20.67:511,21,0	1/1:5,18:25:47.96:556,48,0	1/1:11,9:21:14.70:454,15,0	1/1:4,8:15:27.03:330,27,0	1/1:5,13:18:35.57:451,36,0	1/1:2,19:24:62.18:803,62,0	1/1:4,14:21:33.10:438,33,0	1/1:5,24:32:75.15:935,75,0	1/1:6,16:24:36.11:478,36,0	1/1:2,3:5:9.03:126,9,0
chr10	32405365	.	A	AT	17363.43	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-12.937;DP=737;FS=14.935;HRun=4;HaplotypeScore=86.0235;InbreedingCoeff=0.9999;MQ=82.94;MQ0=0;MQRankSum=-4.285;QD=35.29;ReadPosRankSum=5.661;VQSLOD=3.4151;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,21:24:60.06:794,60,0	1/1:0,14:14:42.14:574,42,0	0/0:23,0:23:60.17:0,60,672	0/0:19,0:18:44.88:0,45,469	1/1:2,31:33:88.49:1172,88,0	1/1:2,35:37:93.31:1272,93,0	1/1:2,15:17:39.13:533,39,0	0/0:44,0:44:99:0,114,1249	1/1:2,26:28:63.21:862,63,0	1/1:1,27:28:81.21:1056,81,0	1/1:2,22:24:66.22:902,66,0	1/1:1,29:30:84.28:1149,84,0	1/1:4,20:24:60.20:816,60,0	1/1:2,11:14:39.11:512,39,0	0/0:30,0:30:87.19:0,87,947	1/1:0,26:26:72.24:984,72,0	1/1:0,26:26:78.26:1067,78,0	1/1:1,12:13:33.11:451,33,0	0/0:32,0:32:90.22:0,90,1000	0/0:43,0:43:99:0,120,1332	0/0:21,0:21:60.17:0,60,680	1/1:3,24:27:72.24:985,72,0	1/1:3,29:32:81.25:1108,81,0	1/1:1,21:22:57.19:779,57,0	1/1:6,24:30:51.17:698,51,0	1/1:1,29:30:87.26:1158,87,0	0/0:33,0:33:99:0,99,1112	1/1:0,13:13:36.12:492,36,0
chr10	32406805	.	TACACATACACACAC	T	18477.58	PASS	AB=0.926;AC=45;AF=0.804;AN=56;BaseQRankSum=5.759;DP=648;FS=10.100;HRun=0;HaplotypeScore=225.2892;InbreedingCoeff=0.4020;MQ=63.80;MQ0=10;MQRankSum=-5.237;QD=33.84;ReadPosRankSum=3.672;VQSLOD=3.0254;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:17,4:21:20.93:362,21,0	1/1:2,10:13:24.08:924,24,0	0/0:39,0:21:19.40:0,19,767	0/0:36,0:19:34.40:0,34,397	1/1:3,26:28:21.07:746,21,0	1/1:1,19:20:24.08:995,24,0	1/1:1,14:15:3.01:125,3,0	0/1:26,0:26:91.59:320,0,92	1/1:3,23:27:36.12:1471,36,0	1/1:1,23:24:56.95:966,57,0	1/1:2,20:23:17.80:690,18,0	1/1:4,18:22:27.09:1120,27,0	1/1:0,33:34:57.03:2276,57,0	1/1:2,26:30:39.13:1572,39,0	0/0:27,0:27:75.16:0,75,4101	1/1:5,30:36:48.16:1968,48,0	1/1:1,9:10:6.02:249,6,0	1/1:2,9:11:3.01:124,3,0	0/1:13,0:12:57.88:155,0,58	0/1:15,0:26:7.99:450,0,8	0/1:11,0:11:1.14:105,0,1	1/1:1,26:28:20.81:808,21,0	1/1:1,31:32:11.46:497,11,0	0/1:12,1:13:66.59:203,0,67	1/1:0,23:24:24.01:888,24,0	1/1:0,23:23:53.58:1044,54,0	1/1:3,0:25:29.81:231,30,0	1/1:10,0:10:23.93:190,24,0
chr10	32406811	.	TACAC	T	4332.06	PASS	AB=1.000;AC=46;AF=0.920;AN=50;BaseQRankSum=8.267;DP=628;FS=0.000;HRun=0;HaplotypeScore=194.7224;InbreedingCoeff=0.2555;MQ=59.56;MQ0=11;MQRankSum=-7.316;QD=8.38;ReadPosRankSum=1.774;VQSLOD=3.7612;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:22:6.01:55,6,0	1/1:11,0:11:18.11:190,18,0	./.	./.	1/1:28,0:27:17.24:146,17,0	1/1:19,0:19:24.03:223,24,0	1/1:14,0:14:3:28,3,0	0/1:23,0:23:2.97:40,0,3	1/1:26,0:26:36.04:334,36,0	1/1:24,0:24:14.23:119,14,0	1/1:22,0:22:17.70:146,18,0	1/1:18,0:18:27.03:251,27,0	1/1:34,0:34:55.61:506,56,0	1/1:28,0:28:39.04:360,39,0	0/0:25,0:27:62.68:0,63,1335	1/1:32,0:32:48.05:444,48,0	1/1:9,0:9:6.01:56,6,0	1/1:9,0:9:3:28,3,0	1/1:11,3:13:8.82:103,9,0	1/1:29,1:30:7.58:320,8,0	1/1:10,0:10:3.01:47,3,0	1/1:28,0:28:21.02:194,21,0	1/1:31,0:31:11.66:111,12,0	1/1:14,0:14:5.79:41,6,0	1/1:24,0:24:21.02:194,21,0	0/1:24,0:24:15.29:142,0,15	1/1:23,0:23:7.10:254,7,0	./.
chr10	32410819	.	GGGTA	G	4112.15	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=11.933;DP=666;FS=50.658;HRun=0;HaplotypeScore=100.7301;InbreedingCoeff=0.9243;MQ=46.95;MQ0=29;MQRankSum=-9.962;QD=41.54;ReadPosRankSum=-1.635;VQSLOD=1.6924;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:38:69.24:0,69,1968	0/0:9,0:9:27.09:0,27,751	0/0:13,0:1:3.01:0,3,68	0/0:19,0:3:6.01:0,6,66	0/0:37,0:35:78.27:0,78,2226	0/0:17,0:17:39.09:0,39,1060	0/0:39,0:29:72.17:0,72,1951	1/1:7,13:14:39.13:782,39,0	0/0:16,0:16:33.06:0,33,886	0/0:25,0:19:57.20:0,57,1619	0/0:18,0:18:45.15:0,45,1284	0/0:31,0:31:75.26:0,75,2123	0/0:32,0:31:78.27:0,78,2252	0/0:26,0:26:54.05:0,54,1473	0/0:33,0:31:78.27:0,78,2218	0/0:32,0:31:75.22:0,75,2091	0/0:25,0:21:42.14:0,42,1121	0/0:18,0:15:39.13:0,39,1127	1/1:6,11:11:33.11:676,33,0	1/1:0,13:13:39.13:751,39,0	1/1:2,18:17:26.88:556,27,0	0/0:15,0:15:36.07:0,36,973	0/0:22,0:19:45.15:0,45,1289	0/0:19,0:15:27.05:0,27,701	0/0:38,0:38:99:0,108,2999	0/0:30,0:28:81.26:0,81,2222	1/1:0,29:27:66.23:1348,66,0	0/0:9,0:6:9.03:0,9,261
chr10	32411940	.	GT	G	6749.83	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=15.912;DP=795;FS=0.318;HRun=1;HaplotypeScore=93.2186;InbreedingCoeff=0.9924;MQ=87.60;MQ0=0;MQRankSum=0.838;QD=40.42;ReadPosRankSum=-1.734;VQSLOD=4.4305;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,126,1916	0/0:15,0:15:45.15:0,45,718	0/0:28,0:28:81.14:0,81,1165	0/0:34,0:34:93.25:0,93,1399	0/0:25,0:25:72.18:0,72,1052	0/0:36,0:36:99:0,102,1576	0/0:33,0:33:96.33:0,96,1534	1/1:0,39:39:99:1633,117,0	0/0:23,0:23:69.20:0,69,1054	0/0:21,0:21:60.20:0,60,958	0/0:18,0:18:48.16:0,48,766	0/0:39,0:39:99:0,117,1847	0/0:38,0:38:99:0,108,1697	0/0:41,0:41:99:0,120,1917	0/0:50,0:49:99:0,150,2373	0/0:34,0:34:99:0,102,1601	0/0:8,0:8:24.08:0,24,383	0/0:18,0:18:48.16:0,48,760	1/1:0,26:26:78.26:1091,78,0	1/1:0,24:24:69.23:964,69,0	1/1:0,54:54:99:2056,147,0	0/0:25,0:25:69.21:0,69,1048	0/0:18,0:18:42.13:0,42,637	0/0:31,0:31:93.26:0,93,1430	0/0:17,0:16:51.17:0,51,815	0/0:26,0:26:75.23:0,75,1134	1/1:0,24:24:72.24:1006,72,0	0/0:6,0:6:12.04:0,12,192
chr10	32415923	.	CAA	C	14467.06	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=14.266;DP=580;FS=11.875;HRun=3;HaplotypeScore=73.0838;InbreedingCoeff=0.9989;MQ=88.38;MQ0=4;MQRankSum=-4.057;QD=41.22;ReadPosRankSum=6.436;VQSLOD=3.2587;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,16:16:45.15:688,45,0	1/1:0,13:13:30.10:459,30,0	0/0:24,0:24:62.38:0,62,1189	0/0:26,0:26:72.23:0,72,1292	1/1:0,32:32:87.30:1331,87,0	1/1:0,20:20:57.19:873,57,0	1/1:1,14:15:42.14:643,42,0	0/0:33,0:33:90.30:0,90,1707	1/1:0,12:12:30.10:459,30,0	1/1:0,25:25:72.24:1102,72,0	1/1:1,22:23:63.21:964,63,0	1/1:0,16:16:42.14:643,42,0	1/1:1,16:17:42.14:643,42,0	1/1:0,13:11:30.10:459,30,0	0/0:23,0:23:63.22:0,63,1218	1/1:0,27:27:69.23:1057,69,0	1/1:0,11:11:33.11:505,33,0	1/1:0,11:11:33.11:505,33,0	0/0:27,0:27:75.26:0,75,1448	0/0:35,0:35:99:0,105,1991	0/0:18,0:18:54.19:0,54,1043	1/1:0,13:13:39.13:597,39,0	1/1:0,16:16:45.15:689,45,0	1/1:0,20:19:48.16:735,48,0	1/1:0,15:15:39.13:597,39,0	1/1:0,27:27:78.26:1195,78,0	0/0:43,0:43:99:0,126,2435	1/1:0,9:8:21.07:321,21,0
chr10	32416370	.	G	GA	13469.61	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-13.715;DP=651;FS=12.785;HRun=7;HaplotypeScore=59.2876;InbreedingCoeff=0.9902;MQ=82.28;MQ0=0;MQRankSum=-3.791;QD=29.54;ReadPosRankSum=4.995;VQSLOD=4.2297;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,21:23:57.17:689,57,0	1/1:1,15:16:39.12:471,39,0	0/0:22,0:22:54.07:0,54,514	0/0:17,0:17:36.04:0,36,339	1/1:4,31:35:93.20:1090,93,0	1/1:4,31:35:84.26:1015,84,0	1/1:3,14:17:36.11:435,36,0	0/0:29,0:29:78.10:0,78,744	1/1:3,18:21:51.16:616,51,0	1/1:8,21:29:66.18:780,66,0	1/1:2,24:26:66.17:782,66,0	1/1:5,17:22:48.15:580,48,0	1/1:6,15:21:41.92:506,42,0	1/1:5,18:23:54.17:652,54,0	0/0:24,0:24:69.11:0,69,666	1/1:1,21:22:57.17:688,57,0	1/1:3,20:23:60.18:725,60,0	1/1:0,12:11:33.10:399,33,0	0/0:21,0:21:60.06:0,60,566	0/0:31,0:31:81.13:0,81,782	0/0:25,0:25:69.11:0,69,666	1/1:3,26:29:75.19:889,75,0	1/1:1,17:18:47.94:580,48,0	1/1:2,15:17:42.13:507,42,0	1/1:3,21:24:60.18:725,60,0	1/1:3,34:37:99:1232,102,0	0/0:26,0:25:72.11:0,72,695	1/1:0,6:6:9.03:109,9,0
chr10	32416710	.	GCTGGAGGAAAGACGGGGGCACCTT	G	8547.54	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=11.646;DP=680;FS=2.496;HRun=0;HaplotypeScore=453.1713;InbreedingCoeff=0.9894;MQ=75.90;MQ0=0;MQRankSum=-7.453;QD=86.34;ReadPosRankSum=1.357;VQSLOD=3.6049;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:56:99:0,160,14025	0/0:8,0:8:24.08:0,24,2365	0/0:18,0:18:45.10:0,45,2788	0/0:18,0:18:14.27:0,14,1986	0/0:22,0:22:63.19:0,63,5266	0/0:24,0:24:69.24:0,69,6838	0/0:25,0:25:75.26:0,75,7196	1/1:11,6:17:18.03:840,18,0	0/0:31,0:31:93.30:0,93,9440	0/0:31,0:31:93.27:0,93,7149	0/0:14,0:14:39.13:0,39,3037	0/0:34,0:34:99:0,102,10272	0/0:28,0:28:84.29:0,84,8878	0/0:27,0:27:81.28:0,81,7974	0/0:30,0:30:90.31:0,90,8567	0/0:33,0:33:96.33:0,96,9757	0/0:26,0:26:78.25:0,78,7810	0/0:18,0:18:51.17:0,51,4866	1/1:9,16:25:42.13:1858,42,0	1/1:12,16:28:42.11:2486,42,0	1/1:5,9:14:15.05:989,15,0	0/0:29,0:29:81.28:0,81,6691	0/0:20,0:20:60.19:0,60,5105	0/0:27,0:27:81.28:0,81,7843	0/0:25,0:25:72.25:0,72,6511	0/0:26,0:26:75.20:0,75,6720	1/1:3,12:15:36.12:2375,36,0	0/0:11,0:11:33.11:0,33,3762
chr10	32418339	.	C	CA	9183.62	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-3.104;DP=237;FS=15.736;HRun=1;HaplotypeScore=48.7526;InbreedingCoeff=0.7414;MQ=68.49;MQ0=0;MQRankSum=-2.034;QD=41.37;ReadPosRankSum=3.304;VQSLOD=3.4530;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,13:13:30.10:470,30,0	1/1:0,2:2:6.02:96,6,0	0/0:5,0:5:5.97:0,6,49	0/0:10,0:6:10.40:0,10,75	1/1:0,7:7:21.07:336,21,0	1/1:0,11:11:30.10:480,30,0	1/1:1,10:11:27.09:432,27,0	1/1:1,14:15:42.14:672,42,0	1/1:0,5:5:15.05:240,15,0	1/1:0,13:14:36.12:576,36,0	1/1:0,10:10:21.07:336,21,0	1/1:0,9:9:27.09:432,27,0	1/1:0,13:13:33.11:525,33,0	1/1:0,10:10:24.08:383,24,0	1/1:0,11:11:21.07:336,21,0	1/1:0,11:11:27.09:432,27,0	1/1:0,10:10:24.08:383,24,0	1/1:0,4:4:12.04:192,12,0	1/1:1,6:7:18.06:288,18,0	1/1:0,6:6:18.06:288,18,0	1/1:0,3:3:9.03:144,9,0	1/1:0,4:4:12.04:191,12,0	1/1:0,9:9:21.07:336,21,0	1/1:0,6:6:15.05:240,15,0	1/1:0,11:11:30.10:480,30,0	1/1:0,7:7:18.06:277,18,0	1/1:0,11:11:33.11:527,33,0	1/1:0,2:2:6.02:96,6,0
chr10	32423142	.	AG	A	5192.30	PASS	AB=1.000;AC=14;AF=0.250;AN=56;BaseQRankSum=4.857;DP=622;FS=3.400;HRun=1;HaplotypeScore=109.6420;InbreedingCoeff=0.6131;MQ=81.16;MQ0=0;MQRankSum=0.364;QD=23.28;ReadPosRankSum=-6.078;VQSLOD=2.8922;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:15,0:15:45.86:46,0,64	0/0:8,0:8:8.64:0,9,38	0/0:19,0:19:48.10:0,48,623	0/0:15,0:15:37.21:0,37,468	0/0:35,0:35:8.53:0,9,217	0/0:20,0:20:23.67:0,24,150	0/0:19,0:19:15.90:0,16,118	1/1:0,30:30:90.26:1191,90,0	0/0:23,0:23:31.22:0,31,183	0/0:31,0:31:38.72:0,39,183	0/0:25,0:25:32.64:0,33,190	0/0:24,0:24:47.76:0,48,172	0/0:18,0:18:15.61:0,16,116	0/0:16,0:16:12.03:0,12,104	0/0:19,0:19:57.18:0,57,832	0/0:22,0:22:41.28:0,41,159	0/0:20,0:20:50.82:0,51,198	0/1:11,0:11:1.52:2,0,81	1/1:0,14:14:42.10:550,42,0	1/1:0,42:42:99:1711,126,0	1/1:0,15:15:42.14:585,42,0	0/0:24,0:24:8.16:0,8,144	0/0:28,0:28:35.57:0,36,211	0/0:17,0:17:42.42:0,42,157	0/1:32,0:32:34.16:34,0,145	0/1:33,0:33:26.25:26,0,145	1/1:0,31:31:75.25:1047,75,0	0/0:16,0:16:40.41:0,40,155
chr10	32424219	.	G	GAC	2580.54	PASS	AB=0.677;AC=37;AF=0.771;AN=48;BaseQRankSum=-2.667;DP=274;FS=1.524;HRun=0;HaplotypeScore=34.2835;InbreedingCoeff=0.3450;MQ=53.25;MQ0=30;MQRankSum=-0.384;QD=19.12;ReadPosRankSum=1.233;VQSLOD=3.5259;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,1:3:3.01:50,3,0	1/1:1,4:5:9.03:150,9,0	0/0:52,0:19:16.19:0,16,154	0/0:60,0:13:11.98:0,12,144	0/0:2,5:6:3.01:0,3,38	./.	1/1:4,3:7:12.04:196,12,0	0/1:12,7:19:47.76:321,0,48	./.	1/1:5,5:10:15.05:248,15,0	1/1:1,2:3:6.02:100,6,0	1/1:4,4:8:6.02:100,6,0	1/1:6,2:7:6.49:97,6,0	1/1:3,1:4:3.01:50,3,0	0/0:7,0:7:12.04:0,12,151	1/1:4,2:5:0.47:1,0,0	1/1:2,5:7:12.04:199,12,0	1/1:2,1:2:3.01:49,3,0	1/1:3,5:8:9.03:146,9,0	1/1:4,4:8:9.03:150,9,0	./.	1/1:0,2:2:3.01:50,3,0	1/1:3,4:7:6.02:100,6,0	./.	0/1:4,3:7:22.81:160,0,23	0/1:3,6:8:16.82:238,0,17	1/1:1,4:5:12.04:183,12,0	1/1:4,2:4:9.03:142,9,0
chr10	32424243	.	T	TTA	797.42	PASS	AB=0.769;AC=24;AF=0.857;AN=28;BaseQRankSum=-1.080;DP=104;FS=0.000;HRun=0;HaplotypeScore=25.9900;InbreedingCoeff=0.0892;MQ=87.50;MQ0=6;MQRankSum=-0.900;QD=11.56;ReadPosRankSum=1.920;VQSLOD=2.6225;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	1/1:2,2:4:6.02:96,6,0	0/0:10,0:5:3.99:0,4,15	0/1:27,0:8:1.34:1,0,13	1/1:1,1:1:3.01:48,3,0	1/1:0,1:1:3.01:48,3,0	1/1:4,1:5:6.02:95,6,0	./.	./.	1/1:1,1:2:3.01:48,3,0	./.	./.	1/1:1,1:2:3.01:48,3,0	./.	./.	1/1:1,0:1:3.01:47,3,0	1/1:4,3:7:6:72,6,0	./.	1/1:3,0:3:4.83:42,5,0	./.	./.	./.	./.	./.	1/1:2,3:5:9.03:144,9,0	./.	1/1:3,0:3:3:25,3,0	0/1:1,6:7:21.04:177,0,21
chr10	32428121	.	TATATATTATATATAATA	T	2913.85	PASS	AB=0.833;AC=29;AF=0.630;AN=46;BaseQRankSum=5.680;DP=177;FS=9.977;HRun=0;HaplotypeScore=60.8731;InbreedingCoeff=0.5180;MQ=67.74;MQ0=10;MQRankSum=-4.569;QD=47.77;ReadPosRankSum=2.106;VQSLOD=1.1656;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,1:3:9.03:236,9,0	1/1:0,1:1:3.01:145,3,0	0/0:19,0:5:5.69:0,6,61	0/0:49,0:11:4.03:0,4,23	./.	1/1:2,4:6:15.03:604,15,0	1/1:2,0:2:6.02:91,6,0	0/0:25,0:25:63.22:0,63,3261	1/1:2,0:2:3.01:52,3,0	1/1:1,0:1:2.97:20,3,0	1/1:0,4:4:9.03:194,9,0	./.	1/1:0,2:2:2.67:145,3,0	0/1:4,1:5:9.89:158,0,10	0/0:3,0:3:3.01:0,3,40	1/1:0,2:2:3.01:145,3,0	1/1:3,6:8:3.01:30,3,0	1/1:5,0:5:6:62,6,0	0/0:5,0:5:12.03:0,12,182	0/0:2,0:2:6.02:0,6,435	0/0:3,0:3:6.02:0,6,254	./.	1/1:1,0:1:3:25,3,0	./.	1/1:1,4:5:9.03:436,9,0	./.	0/0:6,0:6:18.06:0,18,814	1/1:1,12:13:15.05:727,15,0
chr10	32428138	.	A	AAT	870.20	PASS	AB=0.833;AC=34;AF=0.708;AN=48;BaseQRankSum=3.615;DP=177;FS=4.480;HRun=0;HaplotypeScore=33.7441;InbreedingCoeff=0.4644;MQ=68.15;MQ0=8;MQRankSum=-2.920;QD=10.00;ReadPosRankSum=2.829;VQSLOD=2.5515;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,2:3:5.23:56,5,0	1/1:1,1:2:5.23:57,5,0	0/1:17,0:5:1.61:2,0,3	0/0:40,0:7:2.91:0,3,18	1/1:0,3:3:6.02:85,6,0	1/1:4,3:8:14.09:123,14,0	1/1:1,3:4:6.49:100,6,0	0/0:29,0:29:78.23:0,78,961	1/1:0,4:4:3.01:50,3,0	1/1:0,2:3:9.02:125,9,0	1/1:4,0:4:9.03:123,9,0	1/1:1,0:1:3.01:39,3,0	1/1:2,0:2:1.25:3,1,0	0/1:3,1:6:8.71:48,0,9	./.	1/1:2,0:2:2.37:8,2,0	1/1:7,1:7:3.01:50,3,0	1/1:0,1:1:3.01:50,3,0	0/0:2,0:2:6.02:0,6,76	0/0:6,0:6:18.06:0,18,226	0/0:4,0:4:3.01:0,3,37	./.	1/1:0,2:2:3.01:50,3,0	./.	1/1:4,0:4:6.07:17,6,0	./.	0/0:7,0:7:21.05:0,21,250	1/1:12,0:12:11:35,11,0
chr10	32429252	.	AAG	A	16555.81	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=12.542;DP=587;FS=3.575;HRun=0;HaplotypeScore=74.1378;InbreedingCoeff=0.9890;MQ=67.53;MQ0=3;MQRankSum=0.474;QD=39.51;ReadPosRankSum=5.273;VQSLOD=6.6189;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,41:41:99:1561,102,0	1/1:1,9:10:27.09:413,27,0	0/0:22,0:14:32.15:0,32,565	0/0:12,0:9:21.41:0,21,309	1/1:1,31:32:94.04:1321,94,0	1/1:0,16:16:33.11:502,33,0	1/1:1,12:13:30.10:459,30,0	0/0:39,0:39:99:0,114,2025	1/1:0,15:15:42.14:643,42,0	1/1:0,28:28:84.26:1230,84,0	1/1:0,27:27:75.25:1147,75,0	1/1:0,10:10:27.09:413,27,0	1/1:0,22:22:57.08:872,57,0	1/1:0,20:20:51.17:780,51,0	0/0:17,0:17:51.17:0,51,926	1/1:0,22:22:54.18:827,54,0	1/1:0,20:20:44.95:679,45,0	1/1:1,14:14:36.12:550,36,0	0/0:13,0:13:36.12:0,36,631	0/0:31,0:31:93.30:0,93,1654	0/0:3,0:3:9.03:0,9,137	1/1:1,15:16:45.11:663,45,0	1/1:0,28:28:72.13:1073,72,0	1/1:1,15:16:39.13:596,39,0	1/1:0,23:23:57.19:872,57,0	1/1:0,32:32:96.28:1405,96,0	0/0:31,0:31:93.30:0,93,1626	1/1:0,13:13:36.12:551,36,0
chr10	32430659	.	GA	G	10160.76	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=14.219;DP=544;FS=6.473;HRun=8;HaplotypeScore=102.4808;InbreedingCoeff=0.9931;MQ=67.32;MQ0=0;MQRankSum=-5.511;QD=24.08;ReadPosRankSum=2.460;VQSLOD=5.0099;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,11:13:26.94:248,27,0	1/1:1,10:11:30.05:290,30,0	0/0:11,0:11:14.71:0,15,149	0/0:9,0:9:20.93:0,21,224	1/1:3,33:36:87.13:838,87,0	1/1:4,27:31:72.11:695,72,0	1/1:1,24:25:57.09:550,57,0	0/0:21,0:21:51.16:0,51,615	1/1:3,19:22:51.07:492,51,0	1/1:2,17:19:42.06:405,42,0	1/1:1,25:26:66.11:637,66,0	1/1:0,17:17:51.08:493,51,0	1/1:2,26:28:69.11:666,69,0	1/1:0,20:20:54.06:513,54,0	0/0:31,0:31:93.28:0,93,1120	1/1:2,12:14:33.05:319,33,0	1/1:0,9:9:27.04:261,27,0	1/1:1,15:16:33.05:319,33,0	0/0:15,0:15:42.11:0,42,494	0/0:10,0:10:30.08:0,30,351	0/0:5,0:5:15.05:0,15,181	1/1:0,19:19:51.08:491,51,0	1/1:1,18:19:51.08:492,51,0	1/1:2,16:18:39.06:377,39,0	1/1:2,25:27:69.10:664,69,0	1/1:2,27:29:81.09:774,81,0	0/0:20,0:20:60.18:0,60,725	1/1:0,23:23:66.10:637,66,0
chr10	32431761	.	GA	G	9868.32	PASS	AB=0.880;AC=41;AF=0.732;AN=56;BaseQRankSum=11.331;DP=661;FS=7.324;HRun=10;HaplotypeScore=76.5416;InbreedingCoeff=0.8948;MQ=72.25;MQ0=2;MQRankSum=-1.017;QD=20.43;ReadPosRankSum=5.575;VQSLOD=5.3695;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,33:35:95.97:833,96,0	1/1:0,11:11:29.99:260,30,0	0/0:20,0:15:14.59:0,15,245	0/1:19,3:19:27.98:28,0,224	1/1:3,35:38:95.96:832,96,0	1/1:4,21:25:59.98:521,60,0	1/1:3,16:19:20.61:317,21,0	0/0:34,0:36:80.76:0,81,803	1/1:4,15:19:41.98:364,42,0	1/1:6,33:39:89.73:841,90,0	1/1:4,15:19:8.80:305,9,0	1/1:1,17:18:41.99:365,42,0	1/1:4,23:27:32.80:514,33,0	1/1:2,17:19:47.98:417,48,0	0/0:27,0:27:78.20:0,78,856	1/1:3,20:23:59.98:521,60,0	1/1:6,19:25:56.96:491,57,0	1/1:0,12:12:32.92:278,33,0	0/0:15,0:15:42.11:0,42,465	0/0:33,2:35:47.16:0,47,977	0/0:14,0:14:36.55:0,37,390	1/1:2,25:27:68.97:598,69,0	1/1:1,15:16:41.91:364,42,0	1/1:0,17:17:38.99:339,39,0	1/1:2,13:15:35.99:313,36,0	1/1:2,31:33:92.95:802,93,0	0/0:31,0:31:70.09:0,70,809	1/1:1,23:24:38.81:566,39,0
chr10	32432504	.	G	GTTCCAAAGCTTGGCA	53435.82	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-13.297;DP=708;FS=2.834;HRun=0;HaplotypeScore=185.1593;InbreedingCoeff=0.9836;MQ=72.60;MQ0=0;MQRankSum=-17.015;QD=109.50;ReadPosRankSum=4.028;VQSLOD=5.0380;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,22:38:51.18:3811,51,0	1/1:2,6:11:21.02:1119,21,0	0/0:18,0:18:54.02:0,54,1515	0/0:17,0:17:10.28:0,10,1183	1/1:6,27:39:72.18:4857,72,0	1/1:2,19:35:42.14:3018,42,0	1/1:2,7:25:12.04:721,12,0	0/0:36,0:35:99:0,105,3608	1/1:3,16:26:51.18:3687,51,0	1/1:9,13:32:80.48:3808,80,0	1/1:4,13:25:36.04:2181,36,0	1/1:2,15:25:45.15:3059,45,0	1/1:3,18:31:57.20:3815,57,0	1/1:2,13:23:27.09:1723,27,0	0/0:29,0:29:87.28:0,87,3513	1/1:1,10:20:27.09:1835,27,0	1/1:5,7:17:24.08:1794,24,0	1/1:2,0:7:21.05:1052,21,0	0/0:27,0:26:75.24:0,75,2891	0/0:35,0:35:99:0,105,3961	0/0:31,0:31:90.23:0,90,3504	1/1:4,15:31:50.81:3317,51,0	1/1:2,17:25:39.13:2903,39,0	1/1:2,16:23:24.08:1639,24,0	1/1:0,17:26:48.16:3583,48,0	1/1:3,14:23:69.24:4165,69,0	0/0:27,0:27:81.26:0,81,3188	1/1:0,6:6:18.06:1347,18,0
chr10	32434812	.	A	ATCCC	9869.74	PASS	AB=0.834;AC=40;AF=0.714;AN=56;BaseQRankSum=-5.834;DP=422;FS=1.030;HRun=0;HaplotypeScore=66.6855;InbreedingCoeff=0.7959;MQ=67.84;MQ0=10;MQRankSum=-0.838;QD=36.02;ReadPosRankSum=0.335;VQSLOD=4.3624;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,12:20:42.14:1038,42,0	1/1:4,0:4:12.04:211,12,0	0/0:25,0:12:14.83:0,15,250	0/1:38,0:20:14.43:14,0,229	1/1:5,10:14:36.07:809,36,0	1/1:8,8:16:33.11:766,33,0	1/1:8,10:19:16.30:374,16,0	0/0:33,0:33:39.13:0,39,627	1/1:9,5:14:27.08:565,27,0	1/1:8,7:15:24.08:581,24,0	1/1:3,2:5:6.02:148,6,0	1/1:4,5:9:24.06:505,24,0	1/1:8,4:12:15.05:371,15,0	1/1:7,4:11:21.06:472,21,0	0/0:15,0:15:33.11:0,33,545	1/1:6,0:6:12.03:210,12,0	1/1:4,4:8:14.23:369,14,0	1/1:4,4:8:9.03:222,9,0	0/0:17,0:15:30.10:0,30,485	0/0:15,0:15:29.98:0,30,501	0/0:16,0:16:33.11:0,33,534	1/1:8,8:17:42.14:930,42,0	1/1:7,6:13:30.10:703,30,0	1/1:7,6:13:27.07:548,27,0	1/1:5,6:11:21.07:502,21,0	1/1:7,2:9:12.03:249,12,0	0/0:27,0:26:66.15:0,66,1046	0/1:5,4:9:4.93:281,0,5
chr10	32436010	.	T	TATAG	6259.66	PASS	AC=30;AF=0.600;AN=50;BaseQRankSum=-9.585;DP=591;FS=7.801;HRun=0;HaplotypeScore=94.8339;InbreedingCoeff=0.8808;MQ=64.25;MQ0=6;MQRankSum=1.122;QD=18.69;ReadPosRankSum=-1.537;VQSLOD=3.3758;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:37:54.07:0,54,728	0/0:16,0:16:21.07:0,21,320	./.	./.	0/0:26,0:26:54.14:0,54,762	1/1:12,15:27:18.06:420,18,0	1/1:13,3:16:6.02:126,6,0	1/1:36,0:36:8.90:60,9,0	1/1:6,6:13:15.05:348,15,0	0/0:35,0:35:33.09:0,33,464	0/0:20,0:21:36.12:0,36,530	1/1:13,12:26:24.08:559,24,0	1/1:12,7:20:27.09:609,27,0	1/1:6,3:10:3.01:70,3,0	0/0:10,0:23:35.26:0,35,314	0/0:18,0:18:33.08:0,33,462	1/1:17,0:17:0.44:68,0,0	0/0:16,0:16:21.07:0,21,316	1/1:12,1:14:5.42:145,5,0	1/1:17,17:34:42.14:958,42,0	1/1:11,8:20:15.05:350,15,0	1/1:12,11:23:30.10:666,30,0	1/1:15,11:27:24.05:625,24,0	1/1:8,10:19:24.08:560,24,0	0/0:17,0:17:24.07:0,24,347	0/0:19,0:19:27.08:0,27,395	1/1:18,13:33:30.08:697,30,0	./.
chr10	32436602	.	A	AGAGAGGATAA	18181.50	PASS	AB=0.848;AC=52;AF=0.929;AN=56;BaseQRankSum=-5.374;DP=295;FS=1.237;HRun=0;HaplotypeScore=370.0901;InbreedingCoeff=-0.0941;MQ=41.80;MQ0=0;MQRankSum=-0.222;QD=61.63;ReadPosRankSum=1.259;VQSLOD=3.5269;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,0:12:23.16:639,23,0	1/1:6,0:6:16.25:490,16,0	0/1:5,1:7:40.10:350,0,40	0/1:2,0:4:12.76:162,0,13	0/1:13,0:13:11.22:515,0,11	1/1:16,0:16:27.37:997,27,0	1/1:8,0:8:24.08:556,24,0	1/1:17,0:17:44.54:1318,45,0	1/1:15,0:15:23.81:822,24,0	1/1:16,0:16:23.33:829,23,0	1/1:19,0:18:17.85:1187,18,0	1/1:16,0:16:29.19:964,29,0	1/1:5,0:5:9.65:211,10,0	1/1:6,0:6:11.79:411,12,0	1/1:12,0:12:21:820,21,0	1/1:8,0:8:20.57:691,21,0	1/1:9,0:9:17.63:606,18,0	1/1:2,0:2:3.01:116,3,0	1/1:9,0:9:8.23:652,8,0	0/1:14,0:14:1.11:980,0,1	1/1:8,0:8:17.82:442,18,0	1/1:7,0:7:16.68:712,17,0	1/1:11,0:11:10.46:791,10,0	1/1:4,0:4:9.03:363,9,0	1/1:7,0:7:9.13:460,9,0	1/1:22,0:22:24.38:1272,24,0	1/1:15,0:15:4.88:588,5,0	1/1:6,0:6:11.35:238,11,0
chr10	32436689	.	G	GAA	12577.19	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-7.792;DP=454;FS=5.137;HRun=6;HaplotypeScore=69.1235;InbreedingCoeff=0.9931;MQ=82.74;MQ0=5;MQRankSum=-5.290;QD=40.84;ReadPosRankSum=2.563;VQSLOD=4.3347;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,8:11:24.08:405,24,0	1/1:2,10:11:27.09:456,27,0	0/0:21,0:20:28.22:0,28,472	0/0:16,0:17:47.57:0,48,499	1/1:4,15:20:30.95:478,31,0	1/1:2,14:15:42.05:647,42,0	1/1:1,13:14:39.13:659,39,0	0/0:27,0:27:78.23:0,78,932	1/1:5,12:17:30.10:507,30,0	1/1:5,16:21:57.18:912,57,0	1/1:0,12:12:33.11:557,33,0	1/1:2,16:18:42.14:709,42,0	1/1:1,14:15:42.14:710,42,0	1/1:0,16:16:45.15:759,45,0	0/0:21,0:21:54.16:0,54,656	1/1:0,13:13:36.12:608,36,0	1/1:4,11:15:42.08:629,42,0	1/1:1,7:8:21.07:355,21,0	0/0:14,0:14:36.11:0,36,439	0/0:20,0:20:42.12:0,42,508	0/0:5,0:5:11.98:0,12,129	1/1:3,11:13:36.12:593,36,0	1/1:0,19:20:57.20:962,57,0	1/1:1,15:16:36.08:578,36,0	1/1:2,14:16:33.11:558,33,0	1/1:3,18:20:54.17:886,54,0	0/0:20,0:20:54.12:0,54,632	1/1:0,12:12:36.12:609,36,0
chr10	32441965	.	G	GCA	1889	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-7.125;DP=737;FS=6.720;HRun=0;HaplotypeScore=91.0528;InbreedingCoeff=0.9706;MQ=62.67;MQ0=5;MQRankSum=1.641;QD=37.04;ReadPosRankSum=-1.073;VQSLOD=5.2601;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,111,1352	0/0:8,0:8:21.05:0,21,246	0/0:35,0:14:16.40:0,16,247	0/0:50,0:22:19.31:0,19,234	0/0:18,0:18:44.59:0,45,541	0/0:31,0:32:83.73:0,84,1010	0/0:23,0:23:48.15:0,48,591	0/0:33,0:34:53.88:0,54,614	0/0:15,0:15:33.10:0,33,404	1/1:4,28:32:87.28:1374,87,0	1/1:3,16:19:39.13:636,39,0	0/0:20,0:20:54.13:0,54,648	0/0:27,0:28:60.12:0,60,950	0/0:38,0:39:99:0,105,1245	0/0:24,0:24:57.16:0,57,687	0/0:21,0:22:60.02:0,60,715	0/0:14,0:14:39.08:0,39,468	0/0:31,0:32:78.06:0,78,924	0/0:23,0:24:56.80:0,57,649	0/0:17,0:17:48.14:0,48,579	0/0:51,0:54:99:0,144,1688	0/0:33,0:33:90.28:0,90,1107	0/0:12,0:12:30.09:0,30,369	0/0:29,0:29:81.21:0,81,980	0/0:24,0:24:69.21:0,69,838	0/0:25,1:26:20.25:0,20,754	0/0:24,0:24:62.93:0,63,751	0/0:6,0:6:12.04:0,12,148
chr10	32442705	.	CA	C	1540	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=8.131;DP=732;FS=2.062;HRun=1;HaplotypeScore=65.8317;InbreedingCoeff=0.9999;MQ=88.89;MQ0=0;MQRankSum=-5.277;QD=37.56;ReadPosRankSum=2.048;VQSLOD=4.2893;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,41:41:99:1635,117,0	0/0:13,0:13:39.12:0,39,596	0/0:34,0:34:99:0,102,1569	0/0:19,0:19:57.19:0,57,895	0/0:28,0:28:84.29:0,84,1343	0/0:23,0:23:69.22:0,69,1080	0/0:29,0:29:87.28:0,87,1366	0/0:38,0:38:99:0,111,1754	0/0:15,0:15:45.15:0,45,720	0/0:34,0:34:99:0,102,1610	0/0:26,0:26:77.91:0,78,1165	0/0:23,0:23:69.22:0,69,1079	0/0:24,0:24:72.23:0,72,1128	0/0:22,0:22:66.21:0,66,1032	0/0:26,0:26:78.27:0,78,1247	0/0:23,0:23:69.22:0,69,1080	0/0:21,0:21:60.20:0,60,959	0/0:19,0:19:54.16:0,54,833	0/0:16,0:16:48.16:0,48,768	0/0:30,0:30:90.30:0,90,1415	0/0:32,0:32:96.33:0,96,1535	0/0:23,0:23:69.24:0,69,1103	0/0:26,0:26:78.23:0,78,1199	0/0:39,0:39:99:0,117,1847	0/0:31,0:31:93.31:0,93,1465	0/0:24,0:24:72.25:0,72,1152	0/0:30,0:29:90.31:0,90,1436	0/0:23,0:23:69.24:0,69,1103
chr10	32443264	.	T	TC	1619.72	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-9.310;DP=763;FS=1.893;HRun=5;HaplotypeScore=71.1223;InbreedingCoeff=0.9682;MQ=88.29;MQ0=0;MQRankSum=-4.209;QD=29.99;ReadPosRankSum=2.276;VQSLOD=4.4052;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,49:54:99:1715,132,0	0/0:8,0:8:24.06:0,24,258	0/0:29,0:28:56.42:0,56,633	0/0:30,0:29:71.74:0,72,719	0/0:26,0:26:72.15:0,72,755	0/0:17,0:17:39.09:0,39,418	0/0:21,0:21:57.08:0,57,584	0/0:42,0:42:99:0,111,1167	0/0:29,0:29:84.15:0,84,867	0/0:28,0:28:75.09:0,75,779	0/0:25,0:25:75.15:0,75,781	0/0:30,0:30:78.17:0,78,825	0/0:21,0:21:63.08:0,63,652	0/0:28,0:28:75.19:0,75,803	0/0:31,0:31:84.19:0,84,888	0/0:29,0:29:81.18:0,81,850	0/0:29,0:29:84.18:0,84,890	0/0:23,0:23:66.14:0,66,696	0/0:29,0:29:75.14:0,75,772	0/0:28,0:28:81.18:0,81,855	0/0:53,0:53:99:0,144,1479	0/0:29,0:29:84.20:0,84,891	0/0:21,0:21:60.09:0,60,612	0/0:29,0:29:84.18:0,84,880	0/0:23,0:23:69.17:0,69,739	0/0:20,0:20:54.11:0,54,562	0/0:24,0:24:69.16:0,69,729	0/0:7,0:7:12.02:0,12,128
chr10	32445389	.	C	CT	1919.38	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-9.886;DP=704;FS=9.602;HRun=0;HaplotypeScore=66.4302;InbreedingCoeff=0.9978;MQ=81.70;MQ0=0;MQRankSum=-4.118;QD=39.17;ReadPosRankSum=3.471;VQSLOD=3.8402;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,49:49:99:2014,126,0	0/0:9,0:9:27.05:0,27,354	0/0:12,0:12:36.03:0,36,478	0/0:28,0:28:69.16:0,69,949	0/0:28,0:28:84.28:0,84,1170	0/0:27,0:27:78.26:0,78,1089	0/0:19,0:19:57.19:0,57,795	0/0:35,0:35:99:0,105,1433	0/0:30,0:30:90.30:0,90,1258	0/0:31,0:31:90.29:0,90,1238	0/0:18,0:18:51.17:0,51,710	0/0:18,0:18:51.17:0,51,713	0/0:30,0:30:84.28:0,84,1171	0/0:23,0:23:63.16:0,63,840	0/0:39,0:39:99:0,111,1549	0/0:23,0:23:63.17:0,63,859	0/0:10,0:10:27.09:0,27,377	0/0:17,0:17:51.17:0,51,706	0/0:24,0:24:72.24:0,72,1006	0/0:23,0:23:69.22:0,69,943	0/0:41,0:41:99:0,120,1648	0/0:18,0:18:54.14:0,54,730	0/0:28,0:28:81.27:0,81,1130	0/0:25,0:25:72.23:0,72,989	0/0:32,0:32:93.30:0,93,1284	0/0:36,0:36:99:0,108,1485	0/0:17,0:17:51.17:0,51,704	0/0:14,0:14:42.14:0,42,585
chr10	32446315	.	AT	A	3008.77	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=0.946;DP=284;FS=41.212;HRun=4;HaplotypeScore=53.1191;InbreedingCoeff=0.6956;MQ=63.59;MQ0=4;MQRankSum=-0.281;QD=12.59;ReadPosRankSum=3.344;VQSLOD=0.2506;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:17:35.84:284,36,0	1/1:5,0:5:8.66:63,9,0	0/0:18,0:10:14.59:0,15,280	0/0:21,0:11:8.66:0,9,175	1/1:13,1:12:21.81:169,22,0	1/1:5,0:5:14.62:99,15,0	1/1:6,0:6:13.14:87,13,0	1/1:24,0:23:46.50:360,46,0	1/1:6,0:5:7.58:35,8,0	1/1:11,0:11:16.60:165,17,0	1/1:6,0:6:14.25:82,14,0	1/1:9,0:9:23.54:176,24,0	1/1:2,0:2:0.47:1,0,0	1/1:6,0:5:5.49:47,5,0	0/0:6,0:6:18.06:0,18,251	1/1:2,0:2:5.93:53,6,0	1/1:24,0:24:39.03:175,39,0	1/1:13,0:13:32.55:169,33,0	1/1:9,0:8:18.83:155,19,0	1/1:19,0:19:39.97:258,40,0	1/1:4,0:3:8.75:65,9,0	1/1:3,0:3:5.58:52,6,0	1/1:8,1:9:18.52:134,19,0	1/1:2,0:2:3.37:17,3,0	1/1:6,0:4:7.21:36,7,0	1/1:11,2:12:26.73:162,27,0	1/1:13,1:14:16.27:157,16,0	1/1:9,0:9:23.76:149,24,0
chr10	32446318	.	T	TA	1827.43	PASS	AB=1.000;AC=47;AF=0.839;AN=56;BaseQRankSum=0.092;DP=274;FS=70.343;HRun=0;HaplotypeScore=55.9486;InbreedingCoeff=0.4792;MQ=61.79;MQ0=6;MQRankSum=5.677;QD=7.98;ReadPosRankSum=2.522;VQSLOD=1.0349;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,16:17:36.12:566,36,0	1/1:4,0:4:7.64:52,8,0	0/0:17,0:9:26.44:0,26,329	0/0:20,0:10:7.95:0,8,180	1/1:13,0:11:8.97:72,9,0	1/1:7,0:7:3.35:38,3,0	1/1:6,0:6:5.66:38,6,0	1/1:23,0:21:28.52:176,29,0	0/1:6,0:5:3.68:10,0,4	1/1:10,0:10:10.33:109,10,0	1/1:6,0:6:9.65:49,10,0	1/1:9,0:9:17.67:99,18,0	0/0:1,0:1:1.55:0,2,4	1/1:6,0:5:1.67:16,2,0	0/0:6,0:6:18.06:0,18,251	1/1:2,0:2:5.05:19,5,0	1/1:21,0:21:18.53:81,19,0	1/1:13,0:13:7.97:85,8,0	1/1:9,0:8:13.33:70,13,0	1/1:17,0:17:20.84:111,21,0	1/1:4,0:3:7.56:28,8,0	1/1:3,0:3:1.81:17,2,0	1/1:8,0:8:2.44:31,2,0	1/1:1,0:2:5.58:33,6,0	1/1:6,0:4:0.59:14,1,0	1/1:13,0:12:15.20:90,15,0	1/1:14,0:14:4.80:67,5,0	1/1:9,0:9:22.81:100,23,0
chr10	32449255	.	T	TCTCCTCCTTCTCCTC	448.03	PASS	AB=0.968;AC=13;AF=0.232;AN=56;BaseQRankSum=1.050;DP=484;FS=0.766;HRun=0;HaplotypeScore=282.5621;InbreedingCoeff=-0.1550;MQ=59.60;MQ0=3;MQRankSum=-2.422;QD=2.03;ReadPosRankSum=-6.254;VQSLOD=1.2035;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:15,16:36:1.18:213,0,1	0/1:4,0:4:27.14:27,0,40	0/0:39,0:25:14.14:0,14,274	0/0:47,0:28:19.25:0,19,192	0/1:15,0:15:57.52:58,0,208	0/1:24,0:24:13.33:13,0,293	0/1:6,0:6:3.46:3,0,24	0/1:34,0:32:10.84:54,0,11	0/1:14,0:14:4.12:4,0,258	0/0:19,0:19:25.08:0,25,320	0/0:9,0:8:6.02:0,6,79	0/1:13,0:12:20.53:21,0,166	0/0:13,0:13:20.21:0,20,262	0/0:10,0:10:16.86:0,17,213	0/0:25,0:25:51.12:0,51,1652	0/1:8,0:8:28.16:28,0,106	0/1:5,0:4:1.02:4,0,1	0/0:5,0:5:4.16:0,4,108	0/1:18,0:17:99:131,0,105	0/0:14,0:14:6.79:0,7,57	0/0:12,0:12:1.46:0,1,4	0/0:11,0:11:11.58:0,12,179	0/1:22,0:23:10.27:10,0,351	0/0:13,0:12:14.06:0,14,210	0/0:18,0:19:31.27:0,31,453	0/1:21,0:20:23.47:23,0,374	0/0:14,0:14:16.08:0,16,234	0/0:12,0:12:18.05:0,18,256
chr10	32449258	.	C	CCTT	5337.92	PASS	AB=0.985;AC=29;AF=0.518;AN=56;BaseQRankSum=10.276;DP=482;FS=11.485;HRun=0;HaplotypeScore=156.4910;InbreedingCoeff=-0.4778;MQ=57.67;MQ0=9;MQRankSum=-8.384;QD=14.58;ReadPosRankSum=5.671;VQSLOD=3.8876;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:35,0:36:13.13:13,0,392	1/1:2,1:3:6.02:94,6,0	0/0:41,0:25:61.75:0,62,894	0/0:48,0:27:45.37:0,45,662	1/1:14,1:15:10.75:337,11,0	0/1:24,1:24:88.36:476,0,88	0/1:6,0:6:3.80:127,0,4	0/1:35,0:33:99:174,0,274	0/1:14,0:13:74.70:264,0,75	0/1:20,0:20:99:305,0,115	0/1:7,1:7:30.16:69,0,30	0/1:12,0:11:69.95:148,0,70	0/1:13,0:13:39.59:280,0,40	1/1:10,0:10:17.09:218,17,0	0/0:26,0:26:69.21:0,69,1115	0/1:8,0:8:44.15:108,0,44	1/1:5,0:4:7.26:68,7,0	0/1:5,0:5:53.29:70,0,53	0/1:18,0:17:99:160,0,121	0/1:15,0:14:15.93:164,0,16	0/1:9,1:10:53.14:53,0,53	0/1:11,0:11:57.13:171,0,57	0/1:21,1:22:9.02:526,0,9	0/1:13,0:12:46.66:164,0,47	0/1:17,0:17:3.87:483,0,4	0/1:20,0:19:75.18:393,0,75	0/1:13,0:13:27.66:217,0,28	0/1:12,0:11:14.09:254,0,14
chr10	32449264	.	T	TCTC	8036.83	PASS	AB=0.690;AC=44;AF=0.786;AN=56;BaseQRankSum=6.078;DP=484;FS=26.419;HRun=0;HaplotypeScore=147.9826;InbreedingCoeff=0.4638;MQ=51.77;MQ0=13;MQRankSum=-6.403;QD=24.73;ReadPosRankSum=3.576;VQSLOD=2.9109;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:2.87:0,3,35	1/1:2,1:3:3.01:62,3,0	0/0:44,0:23:27.53:0,28,359	0/0:50,0:26:16.60:0,17,248	1/1:7,9:16:24.01:420,24,0	1/1:15,9:22:25.70:567,26,0	1/1:4,2:6:9.03:174,9,0	1/1:29,2:29:25.11:383,25,0	1/1:7,7:13:21.03:434,21,0	0/1:8,11:20:89.10:509,0,89	1/1:4,6:9:6.02:124,6,0	1/1:9,4:11:14.94:264,15,0	1/1:5,6:11:21.07:423,21,0	1/1:4,6:10:18.05:338,18,0	0/0:24,0:24:57.19:0,57,838	1/1:4,4:8:8.98:186,9,0	0/1:4,1:4:7.01:93,0,7	1/1:3,1:5:6.96:102,7,0	1/1:15,3:17:23.12:316,23,0	1/1:13,2:14:5.98:108,6,0	0/1:5,5:10:11.93:48,0,12	1/1:6,5:11:15.52:303,16,0	1/1:7,14:21:41.88:776,42,0	0/1:6,8:12:6.26:249,0,6	1/1:5,12:17:33.11:681,33,0	1/1:9,10:18:33.11:671,33,0	1/1:7,5:12:22.32:433,22,0	1/1:4,7:10:18.06:372,18,0
chr10	32450138	.	TC	T	18713.76	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=4.387;DP=636;FS=6.544;HRun=3;HaplotypeScore=69.5441;InbreedingCoeff=0.9833;MQ=84.73;MQ0=0;MQRankSum=-6.006;QD=33.84;ReadPosRankSum=3.631;VQSLOD=5.4624;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:47.98:0,48,617	1/1:1,10:11:27.08:335,27,0	0/0:23,0:23:66.19:0,66,898	0/0:18,0:18:30.42:0,30,628	1/1:1,31:32:90.17:1079,90,0	1/1:0,32:32:90.28:1115,90,0	1/1:1,13:14:36.11:446,36,0	1/1:2,22:24:66.20:807,66,0	1/1:0,23:23:69.22:852,69,0	1/1:1,38:39:99:1413,114,0	1/1:1,28:29:78.24:966,78,0	1/1:1,21:22:60.19:742,60,0	1/1:0,24:24:69.22:855,69,0	1/1:0,26:26:78.25:967,78,0	0/0:25,0:25:75.18:0,75,1055	1/1:0,18:18:51.16:632,51,0	1/1:0,11:11:33.05:391,33,0	1/1:0,10:10:30.09:372,30,0	1/1:4,25:29:75.20:903,75,0	1/1:0,27:27:78.25:967,78,0	1/1:0,14:14:36.11:446,36,0	1/1:0,21:21:60.19:743,60,0	1/1:1,33:34:87.14:1078,87,0	1/1:0,23:23:51.16:632,51,0	1/1:0,22:22:60.19:744,60,0	1/1:0,24:24:72.23:893,72,0	1/1:1,37:38:99:1226,99,0	1/1:3,3:6:9.03:112,9,0
chr10	32450242	.	CAG	C	5950.47	PASS	AB=0.964;AC=47;AF=0.839;AN=56;BaseQRankSum=-3.463;DP=532;FS=3.574;HRun=0;HaplotypeScore=86.5817;InbreedingCoeff=0.0152;MQ=51.92;MQ0=18;MQRankSum=-0.045;QD=11.53;ReadPosRankSum=-5.571;VQSLOD=3.5285;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:22:28.10:179,28,0	1/1:9,0:10:10.60:124,11,0	0/1:24,6:11:37.09:83,0,37	0/1:48,0:10:55.06:68,0,55	0/1:16,0:15:9.94:141,0,10	1/1:22,1:23:8.44:287,8,0	0/1:19,2:21:51.16:235,0,51	1/1:17,0:16:44.57:325,45,0	0/1:11,0:11:8.28:165,0,8	1/1:16,0:16:11.93:149,12,0	1/1:13,1:14:22.47:250,22,0	1/1:18,0:18:18.39:247,18,0	1/1:12,0:12:6.22:168,6,0	1/1:13,2:15:12.66:243,13,0	0/0:16,0:16:24.68:0,25,379	1/1:17,0:17:41.92:342,42,0	0/1:21,0:21:0.44:241,0,0	1/1:12,0:11:22.95:147,23,0	1/1:22,1:22:47.20:514,47,0	1/1:0,20:20:8.96:109,9,0	1/1:25,0:21:47.53:414,48,0	1/1:16,0:16:2.64:235,3,0	1/1:15,0:15:10.19:196,10,0	0/1:30,0:30:45.55:259,0,46	1/1:24,1:25:50.61:439,51,0	1/1:15,0:15:15.27:229,15,0	1/1:0,16:16:2.90:46,3,0	1/1:7,1:8:0.60:116,1,0
chr10	32454001	.	AACACACACACACAC	A	357.01	PASS	AB=0.975;AC=8;AF=0.190;AN=42;BaseQRankSum=2.301;DP=490;FS=10.227;HRun=0;HaplotypeScore=175.5020;InbreedingCoeff=0.3023;MQ=62.46;MQ0=26;MQRankSum=-0.416;QD=3.28;ReadPosRankSum=-0.305;VQSLOD=1.8417;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	0/0:18,0:18:9.47:0,9,95	0/0:17,0:17:6.02:0,6,118	0/0:27,0:26:8.24:0,8,135	0/0:32,0:32:0:0,0,0	0/0:12,0:12:5.89:0,6,39	0/0:25,0:23:13.77:0,14,153	0/0:11,0:11:5.81:0,6,46	./.	0/1:18,0:18:7.19:7,0,47	0/0:11,0:11:3.01:0,3,36	0/0:17,0:18:18.06:0,18,859	0/0:12,0:12:2.99:0,3,24	0/0:15,0:15:5.93:0,6,57	0/1:7,0:5:8.45:8,0,49	./.	1/1:17,8:25:1.15:227,1,0	1/1:40,0:37:13.26:141,13,0	0/0:14,0:13:12.02:0,12,126	0/0:17,0:17:12:0,12,139	0/0:17,0:14:2.99:0,3,23	0/0:16,0:16:10.81:0,11,183	0/0:12,0:12:3.90:0,4,47	1/1:14,4:18:2.56:87,3,0	./.
chr10	32454075	.	A	AATGT	403.15	PASS	AB=1.000;AC=3;AF=0.058;AN=52;BaseQRankSum=-4.745;DP=571;FS=5.561;HRun=0;HaplotypeScore=157.3803;InbreedingCoeff=0.5116;MQ=48.41;MQ0=12;MQRankSum=1.908;QD=8.06;ReadPosRankSum=0.641;VQSLOD=2.6913;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:21.03:0,21,209	0/0:8,0:8:15.01:0,15,138	./.	./.	0/0:16,0:16:6.01:0,6,55	0/0:16,0:16:20.61:0,21,175	0/0:31,0:31:5.60:0,6,37	0/1:33,0:33:9.13:9,0,52	0/0:20,0:20:18.02:0,18,168	0/0:25,0:25:27.50:0,28,252	0/0:12,0:12:20.60:0,21,177	0/0:16,0:16:24.03:0,24,223	0/0:19,0:19:24.01:0,24,218	0/0:17,0:17:18.02:0,18,167	1/1:10,7:17:21.07:492,21,0	0/0:23,0:23:45.09:0,45,453	0/0:21,0:20:11.50:0,12,92	0/0:10,0:10:0:0,0,0	0/0:24,0:22:9.02:0,9,93	0/0:18,0:18:24.04:0,24,240	0/0:35,0:35:30.07:0,30,308	0/0:19,0:19:15.02:0,15,139	0/0:15,0:15:8.60:0,9,66	0/0:11,0:11:0.82:0,1,2	0/0:30,0:30:35.63:0,36,316	0/0:18,0:18:27.48:0,27,246	0/0:29,0:29:45.09:0,45,456	0/0:3,0:2:0:0,0,0
chr10	32454114	.	GTATGTA	G	9840.51	PASS	AB=0.995;AC=43;AF=0.768;AN=56;BaseQRankSum=-3.878;DP=617;FS=25.478;HRun=0;HaplotypeScore=133.8361;InbreedingCoeff=0.2145;MQ=52.15;MQ0=52;MQRankSum=-6.495;QD=17.92;ReadPosRankSum=-0.183;VQSLOD=2.6185;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:19,0:19:41.77:42,0,255	1/1:1,15:15:14.87:353,15,0	0/0:26,0:11:27.07:0,27,384	0/0:19,0:9:21.07:0,21,315	1/1:4,20:22:9.49:182,9,0	1/1:3,22:22:21.07:494,21,0	1/1:5,21:23:9.03:181,9,0	0/1:44,0:34:99:786,0,269	1/1:4,17:17:21.07:485,21,0	1/1:4,19:20:51.11:932,51,0	1/1:1,16:16:24.07:553,24,0	1/1:5,17:19:24.08:565,24,0	1/1:2,18:18:27.42:605,27,0	1/1:1,17:17:21.07:483,21,0	0/0:23,0:23:66.17:0,66,1240	0/1:26,1:23:96.80:97,0,369	1/1:4,12:13:12.04:280,12,0	1/1:1,4:4:3.01:60,3,0	0/1:12,0:10:92.69:93,0,123	0/1:23,0:18:99:268,0,203	0/1:25,0:19:89.66:90,0,285	1/1:3,20:22:15.05:353,15,0	1/1:2,19:19:17.78:390,18,0	1/1:3,12:13:3.01:71,3,0	1/1:4,36:36:44.70:1025,45,0	1/1:2,24:24:51.17:999,51,0	0/1:39,0:35:99:395,0,435	1/1:0,2:2:3.01:59,3,0
chr10	32454118	.	GTA	G	7924.86	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=3.586;DP=603;FS=10.761;HRun=0;HaplotypeScore=115.9022;InbreedingCoeff=0.7827;MQ=58.00;MQ0=51;MQRankSum=-5.011;QD=14.87;ReadPosRankSum=5.384;VQSLOD=3.8345;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,12:16:27.09:357,27,0	1/1:15,1:15:14.97:120,15,0	0/0:28,0:15:42.10:0,42,565	0/0:18,0:9:24.06:0,24,338	1/1:22,0:20:9.42:89,9,0	1/1:25,0:22:20.96:175,21,0	1/1:23,1:21:9.01:95,9,0	1/1:12,31:33:75.20:950,75,0	1/1:20,1:17:20.97:184,21,0	1/1:22,0:19:41.99:416,42,0	1/1:17,0:16:23.97:215,24,0	1/1:20,0:17:23.94:192,24,0	1/1:20,0:18:26.95:232,27,0	1/1:18,0:17:20.97:184,21,0	0/0:24,0:24:63.19:0,63,867	1/1:3,23:22:48.14:623,48,0	1/1:13,3:13:11.98:100,12,0	1/1:4,1:4:3.01:40,3,0	1/1:3,9:11:24.06:303,24,0	1/1:5,18:18:51.17:679,51,0	1/1:3,21:18:42.14:559,42,0	1/1:20,1:20:14.97:120,15,0	1/1:20,1:19:18.32:199,18,0	1/1:12,3:13:3:27,3,0	1/1:40,0:35:44.82:414,45,0	1/1:26,0:24:51.02:535,51,0	1/1:2,36:34:81.27:1078,81,0	1/1:2,0:2:3.01:40,3,0
chr10	32454178	.	AG	A	451.43	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.339;DP=658;FS=0.954;HRun=6;HaplotypeScore=74.7414;InbreedingCoeff=0.9774;MQ=89.14;MQ0=36;MQRankSum=-3.441;QD=23.76;ReadPosRankSum=2.312;VQSLOD=3.4580;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,19:19:51.13:546,51,0	0/0:16,0:16:24.08:0,24,307	0/0:27,0:27:75.40:0,75,891	0/0:26,0:26:66.13:0,66,816	0/0:33,0:31:75.23:0,75,970	0/0:25,0:22:36.12:0,36,472	0/0:14,0:13:27.09:0,27,355	0/0:46,0:46:99:0,114,1456	0/0:26,0:23:53.69:0,54,691	0/0:30,0:26:69.21:0,69,880	0/0:19,0:18:51.16:0,51,663	0/0:20,0:17:29.90:0,30,395	0/0:28,0:26:51.15:0,51,653	0/0:17,0:16:33.11:0,33,433	0/0:29,0:29:81.22:0,81,1034	0/0:19,0:15:33.09:0,33,417	0/0:20,0:18:36.12:0,36,472	0/0:14,0:13:32.98:0,33,434	0/0:17,0:17:45.14:0,45,573	0/0:31,0:26:69.21:0,69,892	0/0:18,0:14:42.11:0,42,523	0/0:29,0:29:60.19:0,60,781	0/0:21,0:19:23.87:0,24,308	0/0:24,0:22:39.13:0,39,513	0/0:25,0:21:30.10:0,30,395	0/0:23,0:22:42.09:0,42,521	0/0:33,0:29:78.23:0,78,994	0/0:9,0:9:15.05:0,15,197
chr10	32455702	.	ATCTC	A	2487.83	PASS	AB=0.951;AC=32;AF=0.593;AN=54;BaseQRankSum=-2.973;DP=577;FS=15.670;HRun=0;HaplotypeScore=141.0259;InbreedingCoeff=-0.0776;MQ=68.23;MQ0=11;MQRankSum=2.261;QD=5.71;ReadPosRankSum=5.177;VQSLOD=1.2175;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:18:2.98:21,3,0	1/1:5,3:8:15.03:208,15,0	./.	0/0:26,0:18:0.47:0,0,1	0/1:24,0:22:8.90:136,0,9	0/1:12,1:13:37.60:71,0,38	1/1:20,2:21:5.28:157,5,0	0/0:38,0:37:2.99:0,3,24	0/1:20,0:20:38.46:75,0,38	0/1:18,1:19:99:165,0,171	0/1:14,0:14:16.31:33,0,16	0/0:19,0:22:11.44:0,11,132	1/1:8,1:9:8.75:111,9,0	1/1:14,3:18:5.79:94,6,0	0/0:23,0:24:46.99:0,47,875	0/1:19,0:19:10.04:39,0,10	1/1:20,3:24:26.23:379,26,0	0/0:3,0:6:11.24:0,11,90	0/1:20,0:19:30.01:30,0,61	1/1:26,0:29:4.43:105,4,0	0/1:24,0:22:31.28:31,0,43	1/1:15,1:15:11.90:146,12,0	0/1:17,2:18:35.08:121,0,35	1/1:12,5:17:7.77:139,8,0	1/1:16,3:19:11.89:134,12,0	0/1:31,0:31:22.58:251,0,23	0/1:31,0:33:82.36:82,0,89	0/1:13,3:14:98.09:126,0,98
chr10	32455738	.	C	CTG	100.93	PASS	AB=0.969;AC=6;AF=0.115;AN=52;BaseQRankSum=0.620;DP=605;FS=24.872;HRun=0;HaplotypeScore=212.4582;InbreedingCoeff=0.0632;MQ=40.53;MQ0=34;MQRankSum=2.184;QD=0.84;ReadPosRankSum=1.594;VQSLOD=0.9548;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:11:2.99:23,3,0	0/0:12,0:12:23.58:0,24,171	./.	./.	0/1:26,1:25:47.62:48,0,95	0/0:22,0:22:21.76:0,22,181	0/1:21,1:20:44.66:66,0,45	0/0:44,0:40:99:0,99,637	0/0:19,1:19:24.30:0,24,177	0/0:31,0:27:16.59:0,17,377	0/0:26,0:22:21.78:0,22,211	0/0:15,0:15:14.92:0,15,114	0/0:19,0:19:7.16:0,7,132	0/0:20,0:20:11.93:0,12,91	0/0:24,0:24:62.45:0,62,749	0/0:19,0:18:28.20:0,28,209	0/1:21,1:21:59:59,0,155	0/0:6,0:5:14.97:0,15,120	0/0:19,0:16:31.47:0,31,182	0/1:35,0:36:21.92:22,0,178	0/0:18,0:15:12.34:0,12,74	0/0:31,1:30:11.51:0,12,322	0/0:29,0:27:22.45:0,22,181	0/0:22,0:21:7.70:0,8,64	0/0:19,1:19:3.38:0,3,99	0/0:38,0:36:12.74:0,13,509	0/0:28,0:27:2.22:0,2,186	0/0:16,0:13:19.79:0,20,179
chr10	32455776	.	G	GTC	10810.50	PASS	AC=46;AF=0.885;AN=52;BaseQRankSum=3.102;DP=705;FS=1.286;HRun=0;HaplotypeScore=267.2762;InbreedingCoeff=0.8810;MQ=47.22;MQ0=12;MQRankSum=-6.325;QD=18.14;ReadPosRankSum=3.932;VQSLOD=4.8365;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	1/1:8,8:16:15.05:251,15,0	0/0:22,0:15:37.85:0,38,366	0/0:26,0:13:26.53:0,27,316	1/1:7,23:30:18.06:301,18,0	1/1:10,19:29:24.04:371,24,0	1/1:7,16:22:24.08:402,24,0	1/1:24,23:46:75.04:1051,75,0	1/1:6,12:19:27.04:420,27,0	1/1:17,22:38:84.05:1262,84,0	1/1:8,23:31:21.07:351,21,0	1/1:8,10:18:15.05:236,15,0	1/1:9,15:25:33.10:498,33,0	1/1:5,16:21:8.92:150,9,0	0/0:31,0:31:60.19:0,60,762	1/1:5,19:24:27.09:438,27,0	1/1:6,9:15:30.10:486,30,0	1/1:3,4:6:9.03:150,9,0	1/1:10,12:21:15.47:596,15,0	1/1:15,20:35:21.96:341,22,0	./.	1/1:6,34:40:42.14:703,42,0	1/1:9,25:33:21.96:353,22,0	1/1:8,11:18:5.64:99,6,0	1/1:12,13:24:9.03:137,9,0	1/1:14,21:35:75.25:1201,75,0	1/1:8,19:27:39.13:612,39,0	1/1:4,9:11:24.08:401,24,0
chr10	32455816	.	TCTA	T	16347.14	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=12.980;DP=541;FS=3.538;HRun=0;HaplotypeScore=238.6409;InbreedingCoeff=0.9568;MQ=82.17;MQ0=0;MQRankSum=-13.199;QD=35.00;ReadPosRankSum=2.834;VQSLOD=4.9866;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,13:13:27.04:319,27,0	1/1:1,9:10:30.09:367,30,0	0/0:31,0:31:72.72:0,73,2038	0/0:18,0:18:51.13:0,51,1142	1/1:2,27:29:69.16:815,69,0	1/1:2,26:28:81.24:1005,81,0	1/1:3,12:15:45.11:524,45,0	1/1:2,22:24:72.22:915,72,0	1/1:1,14:15:39.12:488,39,0	1/1:2,32:34:99:1236,99,0	1/1:0,20:20:60.19:731,60,0	1/1:0,13:13:39.12:480,39,0	1/1:0,17:17:51.16:639,51,0	1/1:0,20:20:60.15:726,60,0	0/0:25,0:25:75.26:0,75,1849	1/1:1,20:20:60.16:728,60,0	1/1:1,12:13:33.11:415,33,0	1/1:0,2:2:6.02:79,6,0	1/1:0,10:10:30.10:388,30,0	1/1:3,24:27:75.18:918,75,0	1/1:2,4:6:15:160,15,0	1/1:5,23:28:81.22:956,81,0	1/1:2,22:24:69.20:833,69,0	1/1:1,8:9:24.07:283,24,0	1/1:1,21:22:66.21:830,66,0	1/1:1,24:25:75.24:961,75,0	1/1:2,28:30:90.26:1105,90,0	1/1:1,11:12:36.10:445,36,0
chr10	32455819	.	A	AG	731.05	PASS	AB=0.976;AC=19;AF=0.339;AN=56;BaseQRankSum=-7.744;DP=540;FS=9.160;HRun=0;HaplotypeScore=276.2552;InbreedingCoeff=-0.3068;MQ=82.17;MQ0=0;MQRankSum=-4.061;QD=2.04;ReadPosRankSum=-11.194;VQSLOD=-0.4519;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:9.97:0,10,26	0/1:9,0:9:4.45:4,0,13	0/0:31,0:31:89.32:0,89,1181	0/0:18,0:18:51.09:0,51,649	0/1:28,1:29:11.60:120,0,12	0/0:26,0:26:15.81:0,16,63	0/1:13,0:13:15.49:20,0,15	0/1:23,1:24:35.16:55,0,35	0/0:15,0:15:0.85:0,1,20	0/1:33,1:34:46.19:73,0,46	0/1:20,0:20:6.25:6,0,32	0/1:13,0:13:1.66:2,0,19	0/0:17,0:17:19.67:0,20,50	0/0:20,0:20:23.67:0,24,61	0/0:26,0:26:78.25:0,78,1074	0/1:21,0:20:19.06:43,0,19	0/0:14,0:14:14.63:0,15,36	0/0:2,0:2:2.49:0,2,7	0/1:10,0:10:1.60:2,0,15	0/1:27,2:29:14.31:118,0,14	1/1:5,1:6:1.61:58,2,0	0/1:24,0:24:7.78:8,0,33	0/1:23,0:23:23.60:40,0,24	0/1:9,0:9:10.99:33,0,11	0/1:22,1:23:24.76:39,0,25	0/1:27,2:29:39.93:67,0,40	0/1:28,2:30:20.16:134,0,20	0/1:11,1:12:4.46:57,0,4
chr10	32455821	.	TC	T	9173.36	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=12.977;DP=555;FS=4.342;HRun=1;HaplotypeScore=250.6786;InbreedingCoeff=0.9551;MQ=80.17;MQ0=0;MQRankSum=-12.860;QD=18.99;ReadPosRankSum=3.423;VQSLOD=4.7983;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,13:13:29.03:201,29,0	1/1:0,9:9:26.76:187,27,0	0/0:29,0:29:84.28:0,84,1311	0/0:17,0:17:48.15:0,48,730	1/1:1,27:28:61.48:411,61,0	1/1:1,26:27:77.40:551,77,0	1/1:1,12:13:37.65:248,38,0	1/1:2,22:24:70.56:498,71,0	1/1:2,14:16:41.61:287,42,0	1/1:4,32:36:99:694,100,0	1/1:0,20:20:59.21:390,59,0	1/1:1,13:14:41.48:279,41,0	1/1:1,17:18:50.50:350,51,0	1/1:0,20:20:56.39:383,56,0	0/0:26,0:26:78.27:0,78,1246	1/1:4,20:23:65:442,65,0	1/1:2,12:14:33.18:228,33,0	1/1:0,2:2:5.97:45,6,0	1/1:0,10:10:29.81:219,30,0	1/1:9,24:33:85.23:591,85,0	1/1:2,4:6:13.88:84,14,0	1/1:2,23:25:74.16:501,74,0	1/1:3,22:25:70.96:481,71,0	1/1:1,8:9:25.52:163,26,0	1/1:5,21:26:75.89:526,76,0	1/1:5,24:29:84.51:575,85,0	1/1:2,28:30:88.03:595,88,0	1/1:1,11:12:35.15:245,35,0
chr10	32456234	.	T	TATAAG	1128.78	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-1.829;DP=625;FS=3.956;HRun=0;HaplotypeScore=121.9358;InbreedingCoeff=0.9544;MQ=86.28;MQ0=0;MQRankSum=-4.714;QD=62.71;ReadPosRankSum=-1.780;VQSLOD=4.3087;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,15:18:39.13:1224,39,0	0/0:5,0:5:15.05:0,15,326	0/0:25,0:25:63.15:0,63,1211	0/0:21,0:21:55.75:0,56,1029	0/0:23,0:23:66.21:0,66,1374	0/0:17,0:17:45.12:0,45,875	0/0:20,0:20:60.19:0,60,1260	0/0:34,0:34:93.30:0,93,1966	0/0:27,0:27:78.25:0,78,1636	0/0:32,0:32:93.31:0,93,1966	0/0:31,0:31:90.30:0,90,1911	0/0:23,0:23:69.24:0,69,1498	0/0:19,0:19:54.19:0,54,1158	0/0:18,0:18:54.19:0,54,1173	0/0:23,0:23:69.22:0,69,1443	0/0:30,0:30:90.30:0,90,1908	0/0:17,0:17:48.16:0,48,1024	0/0:6,0:6:15.05:0,15,325	0/0:13,0:13:33.11:0,33,667	0/0:38,0:38:99:0,108,2299	0/0:26,0:26:72.23:0,72,1515	0/0:26,0:26:72.25:0,72,1550	0/0:40,0:40:99:0,105,2237	0/0:17,0:16:48.12:0,48,997	0/0:31,0:31:84.29:0,84,1824	0/0:18,0:18:54.19:0,54,1160	0/0:21,0:21:63.22:0,63,1364	0/0:6,0:6:15.01:0,15,224
chr10	32457832	.	GT	G	13998.09	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=6.617;DP=606;FS=30.768;HRun=5;HaplotypeScore=91.1351;InbreedingCoeff=0.9832;MQ=68.51;MQ0=0;MQRankSum=-0.257;QD=26.66;ReadPosRankSum=3.397;VQSLOD=2.9776;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,39:44:96.63:1060,97,0	1/1:0,5:5:12.03:136,12,0	0/0:19,0:14:28.33:0,28,354	0/0:26,1:27:32.63:0,33,737	1/1:2,23:25:63.17:709,63,0	1/1:0,27:27:60.17:680,60,0	1/1:2,14:16:36.10:402,36,0	1/1:3,31:34:90.24:1019,90,0	1/1:0,12:12:27.08:306,27,0	1/1:2,25:27:72.18:804,72,0	1/1:1,15:16:39.10:432,39,0	1/1:0,20:20:42.12:476,42,0	1/1:1,15:16:36.10:408,36,0	1/1:0,25:25:60.17:681,60,0	0/0:35,0:35:99:0,102,1393	1/1:0,23:23:60.17:680,60,0	1/1:2,23:25:45.13:509,45,0	1/1:2,16:18:39.11:441,39,0	1/1:2,14:16:39.08:421,39,0	1/1:2,10:12:21.06:234,21,0	1/1:1,19:20:48.14:544,48,0	1/1:2,15:17:45.13:507,45,0	1/1:1,18:19:48.08:544,48,0	1/1:2,28:30:59.97:771,60,0	1/1:0,9:9:24.07:272,24,0	1/1:0,27:27:81.21:905,81,0	1/1:3,31:34:75.21:851,75,0	1/1:1,7:8:18.05:204,18,0
chr10	32469941	.	CAAG	C	8732.52	PASS	AC=48;AF=0.923;AN=52;BaseQRankSum=8.068;DP=553;FS=3.869;HRun=0;HaplotypeScore=69.2147;InbreedingCoeff=0.7309;MQ=33.85;MQ0=20;MQRankSum=-7.687;QD=19.03;ReadPosRankSum=1.182;VQSLOD=4.4381;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,9:11:15.05:238,15,0	1/1:1,6:6:9.03:143,9,0	./.	./.	1/1:3,22:22:34.48:567,34,0	1/1:1,16:14:12.04:190,12,0	1/1:5,6:7:12.04:189,12,0	1/1:6,13:14:32.89:385,33,0	1/1:1,14:11:21.07:333,21,0	1/1:2,18:12:30.10:475,30,0	1/1:1,24:23:33.11:522,33,0	1/1:2,13:15:21.07:332,21,0	1/1:3,23:26:24.02:328,24,0	1/1:1,28:26:33.11:522,33,0	0/0:32,0:32:75.24:0,75,1599	1/1:2,17:17:39.12:597,39,0	1/1:3,12:14:12.04:190,12,0	0/0:4,7:7:3.01:0,3,64	1/1:1,8:6:15.05:238,15,0	1/1:4,37:40:36.12:570,36,0	1/1:3,5:7:6.02:95,6,0	1/1:4,25:26:24.08:380,24,0	1/1:3,19:20:12.04:190,12,0	1/1:3,8:10:8.99:142,9,0	1/1:1,21:22:36.12:570,36,0	1/1:6,19:22:51.17:800,51,0	1/1:6,14:16:21.07:333,21,0	1/1:2,15:17:27.07:404,27,0
chr10	32469993	.	G	GA	12450.85	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=3.576;DP=656;FS=0.630;HRun=3;HaplotypeScore=94.7689;InbreedingCoeff=0.8737;MQ=46.56;MQ0=9;MQRankSum=-1.799;QD=21.28;ReadPosRankSum=0.711;VQSLOD=4.3875;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,23:27:56.98:760,57,0	1/1:1,7:7:12.04:166,12,0	0/0:19,0:5:14.76:0,15,135	0/0:18,0:4:2.19:0,2,66	1/1:4,27:29:48.07:618,48,0	1/1:3,22:21:42.14:583,42,0	1/1:0,18:13:30.10:417,30,0	1/1:19,4:19:42.07:464,42,0	1/1:3,14:17:39.13:542,39,0	1/1:4,26:24:63.19:844,63,0	1/1:2,29:29:60.13:809,60,0	1/1:3,18:21:27.09:376,27,0	1/1:6,32:37:53.97:721,54,0	1/1:9,24:27:30.10:417,30,0	0/0:34,0:34:96.27:0,96,1126	1/1:2,17:18:30.10:417,30,0	1/1:4,15:19:38.92:511,39,0	1/1:0,10:6:9.03:125,9,0	1/1:5,5:4:12.02:144,12,0	1/1:3,33:36:48.11:640,48,0	1/1:0,13:13:24.04:312,24,0	1/1:4,28:31:48.09:635,48,0	1/1:2,28:28:39.13:542,39,0	1/1:4,10:14:21.07:290,21,0	1/1:7,12:18:27.08:361,27,0	1/1:4,19:21:48.10:588,48,0	1/1:10,28:28:66.20:835,66,0	1/1:1,17:18:24.08:333,24,0
chr10	32470093	.	ATGTGTGTGTGTGTG	A	5406.34	PASS	AB=0.871;AC=40;AF=0.800;AN=50;BaseQRankSum=1.630;DP=577;FS=0.000;HRun=0;HaplotypeScore=198.3031;InbreedingCoeff=0.3918;MQ=48.97;MQ0=24;MQRankSum=-2.224;QD=14.01;ReadPosRankSum=0.935;VQSLOD=3.8143;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:22:2.29:6,2,0	1/1:6,5:11:3.01:105,3,0	./.	0/0:31,0:8:0:0,0,0	./.	1/1:23,0:22:6:122,6,0	1/1:14,1:13:4.54:205,5,0	./.	1/1:20,3:20:3.01:117,3,0	1/1:17,9:25:27.08:615,27,0	1/1:11,10:17:9.50:266,10,0	1/1:9,2:10:6.02:194,6,0	1/1:16,4:20:17.91:553,18,0	1/1:17,3:19:9:165,9,0	0/0:30,0:30:33.08:0,33,1721	1/1:15,9:24:18.06:690,18,0	1/1:15,0:15:9.03:230,9,0	1/1:7,0:6:3.01:43,3,0	1/1:11,2:12:6:143,6,0	1/1:18,3:21:6.02:234,6,0	0/0:33,0:31:9.03:0,9,208	1/1:7,2:9:3.01:111,3,0	0/0:13,5:17:0.16:0,0,0	0/1:15,3:18:0:0,0,0	1/1:9,9:20:18.06:621,18,0	0/1:20,3:22:99:223,0,195	1/1:9,7:13:9.03:351,9,0	1/1:12,4:15:15.03:412,15,0
chr10	32470672	.	A	AT	11372.03	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-6.185;DP=369;FS=17.502;HRun=2;HaplotypeScore=36.1798;InbreedingCoeff=0.8035;MQ=65.34;MQ0=3;MQRankSum=0.017;QD=33.74;ReadPosRankSum=3.103;VQSLOD=2.8654;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,11:12:24.08:338,24,0	1/1:1,6:7:18.06:254,18,0	0/0:10,0:7:10.96:0,11,125	0/0:4,0:3:0.15:0,0,43	1/1:1,26:27:78.19:1074,78,0	1/1:1,14:15:36.12:508,36,0	1/1:1,8:9:18.06:254,18,0	1/1:4,24:26:69.18:933,69,0	1/1:0,11:11:30.10:423,30,0	1/1:1,13:14:34.07:504,34,0	1/1:2,16:18:51.12:679,51,0	1/1:0,8:8:21.07:296,21,0	1/1:1,12:13:21:272,21,0	1/1:2,11:12:15.05:212,15,0	0/0:18,0:18:54.14:0,54,635	1/1:0,5:5:15.05:212,15,0	1/1:1,20:21:38.34:781,38,0	1/1:1,14:15:42.12:572,42,0	1/1:1,15:15:45.04:557,45,0	1/1:0,18:18:48.12:654,48,0	1/1:0,6:6:15.05:212,15,0	1/1:0,3:3:8.94:102,9,0	1/1:2,7:9:17.97:228,18,0	1/1:0,5:5:6.02:85,6,0	1/1:0,17:17:45.15:635,45,0	1/1:2,15:17:35.83:618,36,0	1/1:1,16:17:33.05:465,33,0	1/1:0,12:12:36.12:507,36,0
chr10	32471912	.	GT	G	12563.46	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-0.388;DP=656;FS=4.347;HRun=9;HaplotypeScore=78.3287;InbreedingCoeff=0.9263;MQ=74.43;MQ0=1;MQRankSum=-2.065;QD=21.85;ReadPosRankSum=3.202;VQSLOD=5.8147;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,19:24:48.97:486,49,0	1/1:0,8:8:24.01:220,24,0	0/0:30,0:24:25.55:0,26,399	0/0:26,0:21:22.87:0,23,234	1/1:4,20:24:57.02:520,57,0	1/1:3,19:22:42.02:384,42,0	1/1:4,14:18:39.01:357,39,0	1/1:7,14:21:44.04:390,44,0	1/1:1,16:17:42.02:384,42,0	1/1:3,23:26:69.01:626,69,0	1/1:1,29:30:81.03:739,81,0	1/1:1,16:17:45.02:412,45,0	1/1:0,24:24:63.03:577,63,0	1/1:6,29:35:68.54:631,69,0	0/0:25,0:25:68.87:0,69,773	1/1:1,22:23:44.94:412,45,0	1/1:3,33:36:81.04:741,81,0	1/1:2,15:17:42.02:384,42,0	1/1:7,21:28:63.02:577,63,0	1/1:3,25:28:72.03:659,72,0	1/1:1,7:8:1.70:145,2,0	1/1:1,9:10:27.01:247,27,0	1/1:2,20:22:45.01:412,45,0	1/1:1,15:16:36.01:329,36,0	1/1:3,20:23:63.03:576,63,0	1/1:1,27:28:81.02:733,81,0	1/1:3,41:44:99:934,102,0	1/1:0,25:25:75.04:686,75,0
chr10	32472554	.	A	AAC	22843.09	PASS	AB=0.556;AC=49;AF=0.875;AN=56;BaseQRankSum=1.210;DP=732;FS=5.703;HRun=0;HaplotypeScore=123.9451;InbreedingCoeff=0.7980;MQ=78.64;MQ0=1;MQRankSum=-5.226;QD=36.32;ReadPosRankSum=5.843;VQSLOD=7.0593;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,23:36:52.04:1119,52,0	0/1:2,8:10:16.13:274,0,16	0/0:39,0:36:63.05:0,63,708	0/0:32,0:31:44.18:0,44,607	1/1:6,21:28:20.01:849,20,0	1/1:4,38:42:99:1624,99,0	1/1:2,17:20:10.96:701,11,0	1/1:14,21:35:28.99:944,29,0	1/1:1,20:22:57.19:935,57,0	1/1:5,24:30:41.01:1142,41,0	1/1:3,25:28:53.39:1146,53,0	1/1:3,14:17:39.13:640,39,0	1/1:10,16:27:42.14:689,42,0	1/1:4,18:22:10.96:701,11,0	0/0:30,0:30:78.22:0,78,942	1/1:0,19:20:57.19:935,57,0	1/1:3,23:26:60.20:984,60,0	1/1:2,12:14:33.58:542,34,0	1/1:4,14:18:7.94:651,8,0	1/1:5,29:34:53.12:1375,53,0	1/1:2,17:20:51.17:836,51,0	1/1:12,24:35:72.72:1180,73,0	1/1:4,18:22:51.17:836,51,0	1/1:3,17:21:51.17:821,51,0	1/1:3,11:14:33.11:541,33,0	1/1:8,29:38:56.10:1413,56,0	1/1:6,34:40:96.33:1571,96,0	1/1:0,9:9:24.08:393,24,0
chr10	32472853	.	CT	C	3756.90	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-6.444;DP=618;FS=0.000;HRun=10;HaplotypeScore=114.6981;InbreedingCoeff=0.9609;MQ=81.00;MQ0=1;MQRankSum=-0.493;QD=19.98;ReadPosRankSum=-0.167;VQSLOD=2.8876;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,32:34:92.97:807,93,0	0/0:9,0:10:26.91:0,27,280	0/0:16,0:15:24.04:0,24,265	0/0:23,0:21:7.65:0,8,250	0/0:26,0:27:74.15:0,74,774	0/0:30,0:30:90.20:0,90,982	0/0:22,1:23:43.10:0,43,687	1/1:11,28:41:87.95:732,88,0	0/0:16,1:17:15.59:0,16,368	0/0:16,0:16:36.10:0,36,398	0/0:24,1:25:46.13:0,46,730	0/0:16,0:16:47.99:0,48,505	0/0:26,0:26:66.12:0,66,695	0/0:15,1:16:19.05:0,19,428	0/0:27,0:27:78.19:0,78,853	0/0:16,1:17:25.07:0,25,498	0/0:17,0:17:51.12:0,51,555	0/0:18,1:19:16.08:0,16,405	1/1:11,23:34:8.52:526,9,0	1/1:5,28:33:53.80:696,54,0	1/1:1,14:15:38.99:339,39,0	0/0:23,0:23:54.14:0,54,593	0/0:21,0:21:57.14:0,57,623	0/0:18,0:18:42.11:0,42,465	0/0:14,0:14:39.11:0,39,431	0/0:20,1:22:18.89:0,19,412	1/1:2,28:31:77:657,77,0	0/0:6,0:6:18.03:0,18,189
chr10	32475161	.	G	GA	18582.04	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-1.808;DP=686;FS=4.145;HRun=8;HaplotypeScore=106.9283;InbreedingCoeff=0.9840;MQ=70.48;MQ0=0;MQRankSum=-5.636;QD=29.31;ReadPosRankSum=-0.549;VQSLOD=3.4913;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,25:25:69.68:797,70,0	1/1:1,10:11:30.09:346,30,0	0/0:9,0:9:17.88:0,18,149	0/0:14,0:14:31.69:0,32,246	1/1:5,37:42:80.83:1157,81,0	1/1:3,18:21:54.16:621,54,0	1/1:7,17:24:20.67:489,21,0	1/1:3,30:33:84.22:949,84,0	1/1:5,23:28:75.17:839,75,0	1/1:8,27:36:90.09:1010,90,0	1/1:10,18:28:14.14:613,14,0	1/1:4,15:18:48.08:527,48,0	1/1:2,23:25:72.17:813,72,0	1/1:2,22:24:69.19:773,69,0	0/0:29,0:29:87.05:0,87,796	1/1:2,19:21:63.19:724,63,0	1/1:2,15:17:48.14:553,48,0	1/1:2,7:9:21.05:231,21,0	1/1:2,26:28:78.20:872,78,0	1/1:6,34:40:77.72:1105,78,0	1/1:1,23:24:66.20:761,66,0	1/1:4,29:33:87.25:990,87,0	1/1:6,26:32:90.24:1010,90,0	1/1:2,22:24:63.15:712,63,0	1/1:5,25:30:53.73:848,54,0	1/1:5,20:25:66.15:741,66,0	1/1:1,26:29:80.90:892,81,0	1/1:0,6:6:18.05:207,18,0
chr10	32475218	.	GAAAC	G	17030.47	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=3.513;DP=620;FS=0.650;HRun=0;HaplotypeScore=148.2163;InbreedingCoeff=0.9947;MQ=86.46;MQ0=0;MQRankSum=-11.320;QD=45.29;ReadPosRankSum=4.817;VQSLOD=5.5505;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:63.13:0,63,1574	1/1:1,9:10:27.09:485,27,0	0/0:22,0:22:60.21:0,60,1528	0/0:32,0:32:63.21:0,63,1966	1/1:6,26:32:81.18:1376,81,0	1/1:3,20:23:60.21:1077,60,0	1/1:3,9:12:30.10:530,30,0	0/0:30,0:30:78.27:0,78,1991	1/1:4,13:17:48.14:804,48,0	1/1:6,19:25:63.21:1104,63,0	1/1:6,17:23:57.18:992,57,0	1/1:4,20:23:63.22:1114,63,0	1/1:5,21:26:72.23:1250,72,0	1/1:4,16:20:51.17:915,51,0	0/0:29,0:29:75.22:0,75,1841	1/1:2,12:14:36.12:647,36,0	1/1:4,11:15:36.12:627,36,0	1/1:2,10:12:27.09:485,27,0	0/0:20,0:20:60.14:0,60,1434	0/0:28,0:28:81.28:0,81,2069	0/0:30,0:30:81.26:0,81,2041	1/1:6,21:27:75.25:1300,75,0	1/1:5,26:31:78.27:1400,78,0	1/1:5,15:20:42.14:754,42,0	1/1:4,13:17:45.13:777,45,0	1/1:4,20:24:66.23:1178,66,0	0/0:28,0:28:81.19:0,81,2008	1/1:0,4:4:12.04:216,12,0
chr10	32475306	.	C	CA	24026.22	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-9.048;DP=681;FS=8.899;HRun=1;HaplotypeScore=71.5531;InbreedingCoeff=0.9971;MQ=88.93;MQ0=0;MQRankSum=-8.734;QD=40.65;ReadPosRankSum=3.384;VQSLOD=5.1848;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,31:32:90.18:1272,90,0	1/1:1,6:7:21.07:308,21,0	0/0:24,0:24:67.42:0,67,803	0/0:37,0:37:99:0,102,1279	1/1:1,34:35:99:1484,99,0	1/1:3,16:19:51.16:744,51,0	1/1:0,23:23:63.21:944,63,0	1/1:2,38:40:99:1659,114,0	1/1:1,33:34:99:1435,99,0	1/1:1,18:19:57.15:806,57,0	1/1:0,17:17:45.15:674,45,0	1/1:3,26:29:72.20:1031,72,0	1/1:0,22:22:66.16:941,66,0	1/1:0,18:18:54.11:782,54,0	0/0:29,0:29:87.28:0,87,1128	1/1:0,27:27:78.26:1169,78,0	1/1:0,19:19:51.17:764,51,0	1/1:0,14:14:42.14:629,42,0	1/1:3,21:24:69.15:964,69,0	1/1:3,28:31:87.16:1222,87,0	1/1:2,28:31:78.26:1168,78,0	1/1:1,18:19:51.17:764,51,0	1/1:1,15:16:45.11:649,45,0	1/1:0,16:16:45.15:674,45,0	1/1:1,32:33:90.30:1349,90,0	1/1:3,23:26:72.14:990,72,0	1/1:5,27:31:93.17:1290,93,0	1/1:0,8:8:21.07:315,21,0
chr10	32475391	.	T	TTAGAAC	11114.30	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-2.671;DP=676;FS=21.765;HRun=0;HaplotypeScore=144.2846;InbreedingCoeff=0.9980;MQ=84.01;MQ0=0;MQRankSum=-13.621;QD=63.88;ReadPosRankSum=-4.500;VQSLOD=2.5561;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:24,13:37:98.43:1579,98,0	0/0:9,0:9:27.09:0,27,634	0/0:27,0:27:62.37:0,62,1234	0/0:29,0:29:73.35:0,73,1408	0/0:34,0:34:87.20:0,87,1695	0/0:21,0:21:57.14:0,57,1100	0/0:23,0:23:60.17:0,60,1274	1/1:9,13:25:57.01:1476,57,0	0/0:15,0:15:42.12:0,42,899	0/0:31,0:31:87.23:0,87,1790	0/0:27,0:27:78.17:0,78,1473	0/0:27,0:27:78.24:0,78,1745	0/0:32,0:32:93.26:0,93,2005	0/0:21,0:21:54.16:0,54,1178	0/0:27,0:26:81.19:0,81,1717	0/0:20,0:20:54.15:0,54,1141	0/0:21,0:21:60.20:0,60,1370	0/0:12,0:12:30.04:0,30,611	1/1:21,9:30:78.05:1934,78,0	1/1:13,19:32:89.95:2357,90,0	1/1:11,4:15:35.92:751,36,0	0/0:20,0:20:54.15:0,54,1162	0/0:22,0:22:57.13:0,57,1092	0/0:21,0:21:57.16:0,57,1210	0/0:34,0:34:96.28:0,96,2020	0/0:21,0:21:60.17:0,60,1243	1/1:8,24:35:93.28:3017,93,0	0/0:8,0:8:17.98:0,18,163
chr10	32476159	.	GA	G	4107.08	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=12.716;DP=504;FS=0.823;HRun=2;HaplotypeScore=51.0711;InbreedingCoeff=0.9706;MQ=70.27;MQ0=0;MQRankSum=-1.160;QD=37.00;ReadPosRankSum=-1.371;VQSLOD=3.4501;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,14:16:48.14:608,48,0	0/0:2,0:2:6.02:0,6,90	0/0:8,0:8:24.04:0,24,281	0/0:5,0:5:11.94:0,12,120	0/0:34,0:34:99:0,102,1507	0/0:20,0:20:60.17:0,60,856	0/0:14,0:14:42.13:0,42,604	1/1:1,29:30:87.26:1100,87,0	0/0:14,0:14:42.14:0,42,628	0/0:15,0:15:45.15:0,45,674	0/0:20,0:20:60.19:0,60,876	0/0:20,0:20:54.17:0,54,788	0/0:30,0:30:87.27:0,87,1260	0/0:24,0:24:72.24:0,72,1074	0/0:24,0:24:72.24:0,72,1079	0/0:12,0:12:36.12:0,36,540	0/0:18,0:18:54.16:0,54,780	0/0:11,0:11:30.10:0,30,450	1/1:1,14:15:45.14:573,45,0	1/1:1,19:20:57.19:739,57,0	1/1:2,4:6:18.06:232,18,0	0/0:22,0:22:63.19:0,63,900	0/0:23,0:23:69.23:0,69,1020	0/0:15,0:15:42.10:0,42,593	0/0:20,0:20:60.20:0,60,899	0/0:27,0:27:81.26:0,81,1180	1/1:2,22:24:66.21:855,66,0	0/0:15,0:15:45.11:0,45,610
chr10	32476229	.	C	CT	4258.91	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=12.994;DP=497;FS=1.884;HRun=2;HaplotypeScore=56.5113;InbreedingCoeff=0.9966;MQ=86.33;MQ0=0;MQRankSum=-1.425;QD=42.59;ReadPosRankSum=-0.653;VQSLOD=4.5155;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,14:16:39.07:567,39,0	0/0:8,0:8:24.08:0,24,335	0/0:17,0:17:51.17:0,51,713	0/0:15,0:16:34.95:0,35,483	0/0:29,0:29:87.29:0,87,1216	0/0:28,0:28:84.26:0,84,1156	0/0:14,0:14:42.12:0,42,569	1/1:1,20:21:60.17:885,60,0	0/0:14,0:14:42.14:0,42,587	0/0:29,0:29:87.29:0,87,1217	0/0:20,0:20:60.18:0,60,820	0/0:19,0:19:57.19:0,57,792	0/0:22,0:22:66.19:0,66,902	0/0:16,0:16:48.13:0,48,637	0/0:14,0:14:42.12:0,42,568	0/0:16,0:16:48.13:0,48,637	0/0:11,0:11:30.10:0,30,419	0/0:11,0:11:20.16:0,20,406	1/1:4,21:25:69.23:1084,69,0	1/1:2,12:14:42.13:635,42,0	1/1:0,10:11:30.10:466,30,0	0/0:6,0:6:18.06:0,18,251	0/0:16,0:16:48.16:0,48,671	0/0:15,0:15:45.15:0,45,628	0/0:26,0:26:75.22:0,75,1027	0/0:25,0:25:72.24:0,72,1007	1/1:0,13:13:39.13:622,39,0	0/0:25,0:25:75.25:0,75,1049
chr10	32476735	.	CGTGT	C	4580.69	PASS	AB=0.984;AC=30;AF=0.536;AN=56;BaseQRankSum=2.601;DP=479;FS=0.574;HRun=0;HaplotypeScore=117.7913;InbreedingCoeff=0.3328;MQ=61.91;MQ0=10;MQRankSum=2.445;QD=14.82;ReadPosRankSum=2.389;VQSLOD=4.0829;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:30:17.80:0,18,253	1/1:5,0:6:18.04:193,18,0	0/0:29,0:13:5.56:0,6,63	0/0:28,0:13:7.25:0,7,93	1/1:25,0:25:30.09:343,30,0	1/1:15,0:15:21.04:224,21,0	0/1:21,0:22:15.84:300,0,16	0/0:21,0:20:15.04:0,15,186	1/1:17,1:18:23.85:301,24,0	0/1:17,0:17:19.91:128,0,20	1/1:14,0:15:27.08:329,27,0	1/1:15,1:16:24.06:271,24,0	1/1:18,0:18:3.77:313,4,0	0/1:14,0:14:13.33:121,0,13	0/0:14,0:13:30.09:0,30,663	0/1:21,1:22:1.07:242,0,1	0/1:22,1:23:22.88:197,0,23	0/1:10,0:10:25.81:26,0,71	0/0:14,0:11:15.04:0,15,230	0/0:11,0:11:6.01:0,6,77	0/0:9,0:8:3.48:0,3,51	1/1:8,0:8:15.04:173,15,0	0/1:15,0:15:9.95:161,0,10	1/1:13,0:13:6.12:305,6,0	1/1:15,0:14:21.06:235,21,0	0/1:26,0:26:34.24:456,0,34	0/0:12,0:10:18:0,18,236	1/1:11,0:11:3.11:263,3,0
chr10	32476763	.	TGTGTGC	T	2709.99	PASS	AB=0.963;AC=28;AF=0.500;AN=56;BaseQRankSum=4.675;DP=495;FS=5.706;HRun=0;HaplotypeScore=138.7537;InbreedingCoeff=0.2885;MQ=58.55;MQ0=10;MQRankSum=1.303;QD=8.26;ReadPosRankSum=7.084;VQSLOD=1.5239;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:34:29.15:0,29,418	1/1:4,4:8:17.42:237,17,0	0/0:23,0:11:18.91:0,19,300	0/0:29,0:15:18.75:0,19,226	1/1:20,4:24:28.57:252,29,0	1/1:21,0:21:19.99:142,20,0	0/1:30,0:30:14.79:103,0,15	0/0:20,0:18:50.10:0,50,594	1/1:15,0:15:22.31:105,22,0	0/1:14,0:14:54.58:117,0,55	1/1:16,0:16:25.65:118,26,0	1/1:12,1:13:22.81:223,23,0	0/1:19,1:20:2.27:146,0,2	0/1:13,1:14:16.10:98,0,16	0/0:17,0:16:45.02:0,45,1139	0/1:20,2:22:4.42:180,0,4	0/1:21,1:22:23.68:136,0,24	0/1:13,0:13:66.69:67,0,76	0/0:11,0:10:26.65:0,27,458	0/0:14,0:14:26.89:0,27,270	0/0:7,0:6:6.47:0,6,86	1/1:9,0:9:20.29:131,20,0	0/1:16,0:16:12.98:87,0,13	0/1:17,0:17:24.37:88,0,24	1/1:13,1:13:19.80:152,20,0	0/1:24,4:28:18.22:438,0,18	0/0:10,0:8:14.46:0,14,319	1/1:12,0:12:1.59:83,2,0
chr10	32476765	.	TGTGC	T	8248.02	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-4.629;DP=491;FS=3.583;HRun=0;HaplotypeScore=108.3892;InbreedingCoeff=0.9557;MQ=60.81;MQ0=10;MQRankSum=1.936;QD=25.38;ReadPosRankSum=5.797;VQSLOD=4.5524;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:33:24.74:0,25,312	1/1:6,2:8:18.06:293,18,0	0/0:23,0:11:18.58:0,19,182	0/0:28,0:17:16.78:0,17,180	1/1:5,19:25:30.10:553,30,0	1/1:2,18:20:18.06:336,18,0	1/1:3,26:29:30.08:557,30,0	0/0:19,0:17:46.89:0,47,386	1/1:1,14:15:23.97:474,24,0	1/1:0,15:15:38.99:472,39,0	1/1:1,15:16:27.09:533,27,0	1/1:2,12:14:24.08:431,24,0	1/1:2,18:20:24.02:504,24,0	1/1:2,12:14:9.27:213,9,0	0/0:17,0:16:41.96:0,42,828	1/1:5,17:22:21.53:430,22,0	1/1:5,17:22:18.05:306,18,0	1/1:10,2:12:16.09:159,16,0	0/0:11,0:10:26.53:0,27,302	0/0:14,0:14:23.89:0,24,219	0/0:8,0:7:6.46:0,6,49	1/1:5,4:9:24.10:323,24,0	1/1:3,13:16:12.65:271,13,0	1/1:2,15:17:25.81:533,26,0	1/1:2,11:12:21.07:395,21,0	1/1:8,19:27:63.81:987,64,0	0/0:10,0:8:13.31:0,13,210	1/1:1,10:11:24.08:477,24,0
chr10	32476767	.	T	TGTGTGTGC	2261.15	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-5.591;DP=478;FS=2.548;HRun=0;HaplotypeScore=162.4293;InbreedingCoeff=0.8003;MQ=62.27;MQ0=9;MQRankSum=-3.732;QD=22.61;ReadPosRankSum=-6.018;VQSLOD=1.1919;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:33,3:36:36.16:674,36,0	0/0:8,0:8:18.06:0,18,338	0/0:23,0:12:32.92:0,33,297	0/0:24,0:15:27.83:0,28,272	0/0:25,0:25:30.08:0,30,471	0/0:19,0:19:18.06:0,18,331	0/0:28,0:28:30.09:0,30,515	1/1:20,0:18:46.78:491,47,0	0/0:15,0:15:23.97:0,24,393	0/0:15,0:15:31.40:0,31,410	0/0:16,0:16:27.09:0,27,507	0/0:14,0:14:24.06:0,24,419	0/0:20,0:20:29.74:0,30,553	0/0:14,0:14:14.94:0,15,228	0/0:16,0:15:41.64:0,42,875	0/0:22,0:22:27.09:0,27,470	0/0:20,0:20:9.84:0,10,232	0/0:10,0:10:11.19:0,11,88	1/1:9,2:10:1.62:354,2,0	1/1:12,0:14:26.80:297,27,0	1/1:7,1:7:3.46:25,3,0	0/0:9,0:9:0.52:0,1,273	0/0:14,0:15:18.03:0,18,307	0/0:16,0:16:29.76:0,30,487	0/0:13,0:12:0.46:0,0,370	0/0:24,0:26:34.57:0,35,855	1/1:7,0:8:21.02:589,21,0	0/0:10,0:10:24.08:0,24,448
chr10	32476772	.	GCA	G	519.74	PASS	AB=0.979;AC=26;AF=0.464;AN=56;BaseQRankSum=6.913;DP=480;FS=23.177;HRun=0;HaplotypeScore=119.2474;InbreedingCoeff=-0.0058;MQ=65.81;MQ0=8;MQRankSum=-0.388;QD=1.49;ReadPosRankSum=6.941;VQSLOD=-0.1098;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:33:4.88:0,5,493	0/1:8,1:9:10.52:48,0,11	0/0:22,0:12:23:0,23,316	0/1:23,1:17:32.86:33,0,257	0/1:25,0:25:15.55:16,0,18	1/1:19,0:19:8.16:28,8,0	0/1:30,1:31:16.35:16,0,74	0/0:19,0:17:44.99:0,45,632	1/1:14,1:15:13.81:54,14,0	0/1:15,0:15:4.96:5,0,20	0/1:16,1:17:29.58:53,0,30	0/1:14,1:15:33.40:38,0,33	0/1:22,0:22:21.32:67,0,21	0/1:17,0:17:29.33:29,0,57	0/0:17,0:16:45.12:0,45,720	1/1:20,0:20:12.29:61,12,0	1/1:20,0:20:6.42:19,6,0	0/0:10,0:10:4.05:0,4,37	0/0:11,0:10:26.98:0,27,318	0/0:12,0:12:27.02:0,27,394	0/0:7,0:6:6.01:0,6,70	0/1:9,0:9:10.69:11,0,16	1/1:14,0:14:11.16:46,11,0	0/1:17,0:17:5.11:39,0,5	0/1:13,0:12:5.84:6,0,16	1/1:24,1:25:20.50:89,20,0	0/1:10,0:8:13.95:14,0,190	0/1:11,0:11:5.97:23,0,6
chr10	32476801	.	A	ATT	4041.84	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-5.297;DP=465;FS=8.981;HRun=7;HaplotypeScore=90.8995;InbreedingCoeff=0.9769;MQ=81.25;MQ0=1;MQRankSum=-4.041;QD=36.74;ReadPosRankSum=0.091;VQSLOD=2.6347;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,25:30:59.69:944,60,0	0/0:7,0:7:15.04:0,15,172	0/0:15,0:15:33.97:0,34,378	0/0:13,0:14:33.09:0,33,380	0/0:25,0:25:69.20:0,69,803	0/0:18,0:18:27.06:0,27,303	0/0:32,0:32:45.08:0,45,490	1/1:6,21:28:66.17:987,66,0	0/0:10,0:10:18.03:0,18,197	0/0:23,0:23:63.16:0,63,716	0/0:19,0:19:45.10:0,45,503	0/0:17,0:17:24.05:0,24,275	0/0:17,0:17:27.08:0,27,315	0/0:22,0:22:39.08:0,39,433	0/0:13,0:12:36.11:0,36,419	0/0:20,0:20:24.05:0,24,269	0/0:13,0:13:15.04:0,15,175	0/0:8,0:8:24.07:0,24,279	1/1:1,16:18:51.12:733,51,0	1/1:0,14:14:39.13:640,39,0	1/1:0,12:12:33.11:541,33,0	0/0:13,0:13:36.08:0,36,398	0/0:11,0:11:12.02:0,12,139	0/0:17,0:17:30.06:0,30,337	0/0:12,0:11:24.06:0,24,279	0/0:19,0:19:45.10:0,45,505	1/1:2,6:8:12.04:197,12,0	0/0:10,0:10:27.08:0,27,314
chr10	32478136	.	C	CAT	7851.51	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-7.841;DP=734;FS=1.972;HRun=0;HaplotypeScore=128.4023;InbreedingCoeff=1.0000;MQ=84.57;MQ0=0;MQRankSum=0.079;QD=47.88;ReadPosRankSum=-1.914;VQSLOD=4.7622;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,25:28:63.22:1213,63,0	0/0:13,0:13:39.13:0,39,596	0/0:23,0:23:60.20:0,60,888	0/0:21,0:21:48.14:0,48,690	0/0:30,0:30:87.26:0,87,1287	0/0:32,0:32:93.25:0,93,1332	0/0:25,0:25:72.24:0,72,1098	1/1:3,25:28:75.18:1263,75,0	0/0:32,0:32:96.27:0,96,1378	0/0:38,0:38:99:0,114,1705	0/0:38,0:38:99:0,111,1600	0/0:20,0:20:60.17:0,60,875	0/0:38,0:38:99:0,111,1651	0/0:25,0:25:75.25:0,75,1143	0/0:28,0:28:81.26:0,81,1218	0/0:32,0:32:90.28:0,90,1332	0/0:20,0:20:57.18:0,57,850	0/0:14,0:14:39.13:0,39,596	1/1:0,25:26:78.21:1393,78,0	1/1:1,26:28:72.25:1385,72,0	1/1:0,21:22:51.17:984,51,0	0/0:26,0:26:75.23:0,75,1122	0/0:14,0:14:42.13:0,42,621	0/0:26,0:26:75.24:0,75,1125	0/0:21,0:21:60.18:0,60,876	0/0:34,1:35:47.38:0,47,1424	1/1:0,32:31:84.29:1614,84,0	0/0:19,0:19:54.18:0,54,825
chr10	32479491	.	A	ATACACCACGAGG	13980.74	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=15.211;DP=583;FS=0.000;HRun=0;HaplotypeScore=218.0694;InbreedingCoeff=0.9746;MQ=80.82;MQ0=0;MQRankSum=-14.783;QD=100.58;ReadPosRankSum=0.100;VQSLOD=4.4876;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,8:20:19.92:1768,20,0	0/0:14,0:14:39.10:0,39,1194	0/0:18,0:18:51.15:0,51,1703	0/0:18,0:18:38.46:0,38,1440	0/0:23,0:23:69.23:0,69,2608	0/0:29,0:29:84.29:0,84,3223	0/0:17,0:17:51.15:0,51,1833	1/1:24,6:30:36.15:2510,36,0	0/0:17,0:17:51.17:0,51,1888	0/0:31,0:31:93.27:0,93,3098	0/0:31,0:31:93.30:0,93,3208	0/0:12,0:12:36.12:0,36,1243	0/0:25,0:25:75.26:0,75,2853	0/0:14,0:14:42.11:0,42,1346	0/0:20,0:20:57.19:0,57,2125	0/0:19,0:18:57.20:0,57,2084	0/0:18,0:18:54.13:0,54,1560	0/0:15,0:15:41.82:0,42,1419	1/1:14,8:22:8.97:2361,9,0	1/1:16,10:27:22.82:2892,23,0	1/1:5,0:5:14.97:366,15,0	0/0:20,0:20:60.21:0,60,2223	0/0:23,0:23:69.24:0,69,2604	0/0:7,0:7:21.07:0,21,827	0/0:35,0:35:99:0,102,3679	0/0:23,0:23:66:0,66,2181	1/1:14,21:35:11.33:4084,11,0	0/0:15,0:15:45.15:0,45,1704
chr10	32479494	.	A	AC	1252.57	PASS	AB=0.736;AC=9;AF=0.161;AN=56;BaseQRankSum=10.796;DP=579;FS=1.516;HRun=0;HaplotypeScore=105.9304;InbreedingCoeff=0.5958;MQ=78.59;MQ0=0;MQRankSum=-12.136;QD=9.01;ReadPosRankSum=1.363;VQSLOD=3.9585;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:13,9:22:20.73:237,21,0	0/0:13,0:13:39.07:0,39,475	0/0:16,0:16:48.15:0,48,639	0/0:17,0:17:42.14:0,42,572	0/0:23,0:23:69.21:0,69,946	0/0:29,0:29:87.25:0,87,1193	0/0:16,0:16:48.16:0,48,670	0/1:26,6:32:99:123,0,199	0/0:17,0:17:51.09:0,51,671	0/0:28,0:28:84.26:0,84,1139	0/0:31,0:31:90.25:0,90,1204	0/0:13,0:13:36.12:0,36,503	0/0:25,0:25:75.23:0,75,1029	0/0:14,0:14:39.11:0,39,526	0/0:19,0:19:54.18:0,54,754	0/0:18,0:17:54.18:0,54,754	0/0:17,0:17:51.12:0,51,655	0/0:14,0:14:42.09:0,42,546	0/1:14,8:22:96.89:192,0,97	1/1:14,11:25:47.60:392,48,0	1/1:2,0:2:5.90:37,6,0	0/0:20,0:20:60.20:0,60,838	0/0:25,0:25:72.21:0,72,969	0/0:7,0:7:21.07:0,21,293	0/0:39,0:39:99:0,108,1463	0/0:24,0:24:72.20:0,72,931	0/1:15,21:36:6.69:424,0,7	0/0:15,0:15:45.15:0,45,628
chr10	32480194	.	GA	G	2522.45	PASS	AB=0.942;AC=14;AF=0.250;AN=56;BaseQRankSum=2.055;DP=454;FS=45.713;HRun=10;HaplotypeScore=55.2918;InbreedingCoeff=0.7904;MQ=78.26;MQ0=0;MQRankSum=2.411;QD=16.07;ReadPosRankSum=-1.445;VQSLOD=0.7179;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,15:18:44.99:391,45,0	0/0:6,0:6:15.04:0,15,166	0/0:17,0:17:21.06:0,21,230	0/1:12,1:13:12.46:12,0,89	0/0:23,0:24:50.95:0,51,531	0/1:20,1:21:0.91:1,0,447	0/0:9,1:10:1.02:0,1,239	1/1:6,29:35:86.92:748,87,0	0/0:16,0:16:36.08:0,36,389	0/0:20,0:20:57.15:0,57,630	0/0:14,0:14:39.11:0,39,431	0/0:19,0:19:45.12:0,45,498	0/0:11,0:11:30.08:0,30,332	0/0:10,0:10:27.05:0,27,283	0/0:17,0:17:45.09:0,45,486	0/0:13,0:13:30.08:0,30,332	0/0:25,0:25:66.18:0,66,730	0/0:13,0:13:30.08:0,30,332	1/1:0,11:11:32.99:287,33,0	1/1:2,19:21:26.81:462,27,0	1/1:1,8:9:15:130,15,0	0/0:16,0:16:42.11:0,42,465	0/0:8,0:8:24.05:0,24,258	0/0:6,0:6:15.04:0,15,166	0/0:17,0:17:48.11:0,48,515	0/0:23,0:23:57.14:0,57,620	1/1:1,28:29:77.98:677,78,0	0/0:11,1:12:7.03:0,7,306
chr10	32480313	.	TTTGAAC	T	3464.78	PASS	AB=0.759;AC=19;AF=0.339;AN=56;BaseQRankSum=4.399;DP=330;FS=28.604;HRun=0;HaplotypeScore=118.7025;InbreedingCoeff=-0.3750;MQ=60.07;MQ0=0;MQRankSum=-7.603;QD=20.87;ReadPosRankSum=0.363;VQSLOD=1.5059;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:69.22:0,69,2397	0/1:2,1:3:61.59:62,0,129	0/0:4,0:4:12.04:0,12,416	0/0:3,0:3:6.02:0,6,198	0/1:9,9:18:99:382,0,476	0/1:9,6:18:99:454,0,467	0/1:1,5:6:52.92:271,0,53	0/0:39,0:39:99:0,117,4093	0/1:3,7:11:99:394,0,215	0/1:2,2:5:99:134,0,115	0/1:7,4:14:99:294,0,450	0/1:1,3:6:99:195,0,138	0/0:7,0:9:9.56:0,10,448	0/1:4,1:7:96.93:97,0,196	0/0:11,0:11:33.11:0,33,1208	0/1:4,3:7:99:185,0,144	0/1:6,2:11:99:116,0,320	0/1:4,0:7:32.91:33,0,215	0/0:22,0:22:66.18:0,66,2259	0/0:27,0:27:81.28:0,81,3013	0/0:9,0:9:27.09:0,27,1003	1/1:0,5:5:12.04:249,12,0	0/1:4,0:4:12.95:13,0,165	0/1:1,1:2:64.23:64,0,65	0/1:10,5:23:99:152,0,938	0/1:6,4:13:99:242,0,426	0/0:17,0:17:51.14:0,51,1628	0/1:3,2:6:99:128,0,194
chr10	32480314	.	T	TAAATATTTATAAATTTA	20999.67	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=14.822;DP=333;FS=5.143;HRun=0;HaplotypeScore=167.4684;InbreedingCoeff=0.9241;MQ=61.58;MQ0=0;MQRankSum=-11.667;QD=118.64;ReadPosRankSum=0.799;VQSLOD=4.7227;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:66.11:0,66,2545	1/1:3,0:3:8.96:372,9,0	0/0:5,0:5:12.51:0,13,337	0/0:3,0:3:5.75:0,6,165	1/1:18,0:18:39.55:1333,40,0	1/1:17,3:20:49.31:2185,49,0	1/1:6,0:6:15.02:518,15,0	0/0:39,0:39:99:0,117,4521	1/1:10,1:11:30.10:1291,30,0	1/1:5,1:6:15.04:675,15,0	1/1:11,3:14:41.34:2094,41,0	1/1:4,2:6:18.06:929,18,0	1/1:7,2:9:27.04:1023,27,0	1/1:5,2:7:16.59:839,17,0	0/0:11,0:11:33.11:0,33,1501	1/1:7,0:7:18.03:648,18,0	1/1:8,3:11:24.08:1382,24,0	1/1:4,3:7:16.30:1144,16,0	0/0:22,0:22:63.21:0,63,2674	0/0:27,0:27:81.27:0,81,3983	0/0:9,0:9:27.08:0,27,1091	1/1:5,0:5:10.28:316,10,0	1/1:3,0:3:9:182,9,0	1/1:2,0:2:5.91:40,6,0	1/1:15,8:23:63.06:3360,63,0	1/1:10,3:13:39.13:2166,39,0	0/0:18,0:18:48.14:0,48,1877	1/1:5,1:6:18.01:503,18,0
chr10	32480327	.	T	TTTA	1788.33	PASS	AB=0.906;AC=17;AF=0.304;AN=56;BaseQRankSum=9.102;DP=372;FS=32.338;HRun=0;HaplotypeScore=119.9267;InbreedingCoeff=-0.2931;MQ=64.42;MQ0=0;MQRankSum=-8.378;QD=9.83;ReadPosRankSum=-2.545;VQSLOD=0.9429;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:75.23:0,75,1255	0/1:2,1:3:56.51:57,0,97	0/0:6,0:6:15.01:0,15,212	0/1:4,0:4:18.68:19,0,113	0/1:20,0:20:99:120,0,572	0/1:22,1:22:99:233,0,694	0/1:7,1:8:93.75:104,0,94	0/0:33,0:33:96.29:0,96,1560	0/1:12,2:14:99:283,0,326	0/1:6,1:7:99:107,0,204	0/1:15,1:16:94.65:95,0,569	0/1:6,1:7:99:113,0,150	0/0:14,0:14:20.10:0,20,660	0/1:7,1:8:36.87:37,0,285	0/0:15,0:15:45.14:0,45,767	0/1:7,3:10:99:160,0,290	0/1:13,1:14:93.24:93,0,372	0/0:11,0:11:30.10:0,30,481	0/0:21,0:21:60.21:0,60,1059	0/0:26,0:26:78.24:0,78,1345	0/0:12,0:12:36.11:0,36,607	1/1:3,0:3:9.03:155,9,0	0/0:5,0:5:12.04:0,12,202	0/0:3,0:3:6.02:0,6,106	0/1:23,1:24:99:117,0,891	0/1:12,2:14:99:179,0,429	0/0:19,0:19:57.20:0,57,995	0/1:7,0:7:81.75:82,0,216
chr10	32480920	.	CT	C	13308.44	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=16.298;DP=657;FS=2.209;HRun=4;HaplotypeScore=101.0261;InbreedingCoeff=0.9999;MQ=73.47;MQ0=0;MQRankSum=-3.689;QD=30.81;ReadPosRankSum=5.717;VQSLOD=4.5618;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:69.23:0,69,961	1/1:0,12:12:30.09:355,30,0	0/0:22,0:22:53.02:0,53,605	0/0:26,0:21:41.83:0,42,521	1/1:1,25:26:66.15:767,66,0	1/1:1,21:22:54.17:647,54,0	1/1:0,16:16:39.12:466,39,0	0/0:32,0:32:87.22:0,87,1139	1/1:3,23:26:72.15:845,72,0	1/1:1,38:39:99:1231,108,0	1/1:0,25:27:81.25:963,81,0	1/1:0,21:21:51.16:610,51,0	1/1:0,24:24:57.17:682,57,0	1/1:1,19:21:60.18:718,60,0	0/0:26,0:26:75.24:0,75,1032	1/1:2,27:29:66.20:790,66,0	1/1:0,29:29:72.22:862,72,0	1/1:2,14:16:41.64:453,42,0	0/0:23,0:23:63.21:0,63,878	0/0:28,0:28:84.24:0,84,1108	0/0:21,0:21:63.17:0,63,830	1/1:1,14:15:42.13:503,42,0	1/1:1,21:23:60.18:717,60,0	1/1:1,14:15:42.13:503,42,0	1/1:1,19:20:51.16:610,51,0	1/1:8,24:32:83.95:935,84,0	0/0:23,0:23:66.20:0,66,902	1/1:1,17:19:56.20:651,56,0
chr10	32481243	.	A	AGT	21975.39	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-16.856;DP=681;FS=13.740;HRun=0;HaplotypeScore=72.2237;InbreedingCoeff=0.9999;MQ=78.14;MQ0=1;MQRankSum=-3.430;QD=53.86;ReadPosRankSum=4.881;VQSLOD=4.2201;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:57.19:0,57,929	1/1:2,13:15:39.13:792,39,0	0/0:31,0:30:87.28:0,87,1362	0/0:30,0:29:45.53:0,46,1018	1/1:0,22:22:66.18:1300,66,0	1/1:1,17:18:45.15:914,45,0	1/1:0,26:26:57.20:1158,57,0	0/0:32,0:32:93.30:0,93,1474	1/1:0,21:20:51.18:1036,51,0	1/1:2,27:30:87.28:1703,87,0	1/1:0,22:22:63.22:1280,63,0	1/1:0,18:18:48.16:972,48,0	1/1:1,25:27:75.26:1518,75,0	1/1:0,28:28:72.25:1463,72,0	0/0:42,0:42:99:0,123,1966	1/1:0,15:15:42.14:854,42,0	1/1:0,19:18:48.16:975,48,0	1/1:1,11:15:33.11:668,33,0	0/0:29,0:29:84.29:0,84,1365	0/0:29,0:29:87.30:0,87,1410	0/0:27,0:27:81.28:0,81,1315	1/1:0,26:27:75.26:1499,75,0	1/1:1,21:22:60.21:1219,60,0	1/1:0,20:21:51.18:1036,51,0	1/1:0,17:17:45.15:915,45,0	1/1:0,26:26:75.26:1513,75,0	0/0:34,0:33:99:0,102,1663	1/1:1,18:19:57.20:1158,57,0
chr10	32484083	.	TTA	T	429.08	PASS	AB=0.867;AC=32;AF=0.727;AN=44;BaseQRankSum=-0.699;DP=191;FS=32.407;HRun=0;HaplotypeScore=28.9441;InbreedingCoeff=0.1909;MQ=114.48;MQ0=27;MQRankSum=-3.612;QD=7.95;ReadPosRankSum=-7.332;VQSLOD=0.3237;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:4,1:3:2.98:21,3,0	./.	0/0:41,0:30:84.60:0,85,1302	0/0:42,0:26:68.51:0,69,1110	1/1:1,0:1:2.97:20,3,0	1/1:5,0:3:8.90:60,9,0	0/1:2,0:2:7.90:34,0,8	0/1:6,2:4:42.51:44,0,43	1/1:3,0:1:2.97:20,3,0	1/1:2,0:1:3:25,3,0	1/1:1,0:1:2.98:21,3,0	1/1:2,0:2:5.95:58,6,0	0/1:4,0:3:6.08:32,0,6	1/1:3,2:3:2.97:20,3,0	0/0:40,0:38:99:0,114,2070	1/1:3,0:1:2.97:20,3,0	0/0:2,1:2:2.96:0,3,19	./.	1/1:1,0:1:3.01:41,3,0	0/1:2,2:3:13.39:31,0,13	./.	1/1:1,0:1:2.98:21,3,0	1/1:1,0:1:2.97:20,3,0	./.	./.	1/1:3,0:1:3.01:42,3,0	1/1:2,1:2:5.91:38,6,0	./.
chr10	32484303	.	TCACACA	T	2873.72	PASS	AB=1.000;AC=43;AF=0.935;AN=46;BaseQRankSum=2.324;DP=281;FS=1.324;HRun=0;HaplotypeScore=73.2709;InbreedingCoeff=0.1884;MQ=68.95;MQ0=8;MQRankSum=-1.194;QD=14.37;ReadPosRankSum=-0.307;VQSLOD=2.2258;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:10:5.95:45,6,0	./.	./.	./.	1/1:6,0:7:6.02:110,6,0	1/1:12,0:14:15.05:303,15,0	./.	0/1:15,0:15:12.49:12,0,22	1/1:4,2:8:8.96:171,9,0	1/1:5,2:7:15.05:295,15,0	1/1:10,0:10:6.02:122,6,0	1/1:3,0:5:3.01:61,3,0	1/1:8,1:10:6.02:111,6,0	1/1:7,1:9:12.04:212,12,0	0/0:16,0:15:29.95:0,30,628	1/1:5,4:12:21.06:352,21,0	1/1:8,7:15:2.51:55,3,0	1/1:4,2:6:3.01:59,3,0	1/1:7,0:6:3.01:61,3,0	1/1:5,0:5:2.97:20,3,0	1/1:14,0:14:5.94:41,6,0	1/1:6,1:9:6:116,6,0	1/1:5,0:6:6.02:113,6,0	1/1:6,0:7:6.02:122,6,0	./.	1/1:7,2:10:15.05:288,15,0	1/1:5,0:5:5.92:39,6,0	1/1:7,0:6:18.02:273,18,0
chr10	32484335	.	ACACACACTCT	A	2963.83	PASS	AB=0.957;AC=35;AF=0.673;AN=52;BaseQRankSum=1.751;DP=284;FS=10.912;HRun=0;HaplotypeScore=77.9322;InbreedingCoeff=0.1118;MQ=39.29;MQ0=21;MQRankSum=1.258;QD=14.18;ReadPosRankSum=2.351;VQSLOD=0.9503;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:10,0:10:16.46:16,0,83	0/0:2,0:1:2.97:0,3,20	./.	0/0:13,0:2:0:0,0,0	1/1:5,0:5:6.02:110,6,0	1/1:14,0:13:13.74:315,14,0	0/0:6,0:6:0:0,0,0	0/0:26,0:24:29.72:0,30,595	1/1:12,0:11:8.47:187,8,0	0/1:8,1:9:7.12:272,0,7	1/1:4,1:5:6.02:122,6,0	1/1:9,0:9:2.88:61,3,0	1/1:6,1:7:6.02:111,6,0	1/1:9,3:12:12.35:220,12,0	0/0:16,0:15:41.99:0,42,996	1/1:11,0:11:21.06:352,21,0	1/1:15,0:15:5.21:92,5,0	1/1:11,0:10:0.51:32,1,0	0/1:14,0:11:38.89:39,0,232	0/1:4,0:4:13.94:14,0,53	0/1:14,0:14:15.42:15,0,65	1/1:7,0:8:5.99:116,6,0	1/1:7,0:7:6.02:113,6,0	1/1:8,1:6:5.70:121,6,0	./.	1/1:11,0:7:17.99:391,18,0	0/1:8,0:8:26.26:26,0,93	0/1:9,2:10:10.28:385,0,10
chr10	32484366	.	G	GTATATA	1782.63	PASS	AB=0.914;AC=33;AF=0.786;AN=42;BaseQRankSum=1.870;DP=220;FS=0.000;HRun=0;HaplotypeScore=64.6996;InbreedingCoeff=0.1691;MQ=49.07;MQ0=7;MQRankSum=-3.649;QD=9.90;ReadPosRankSum=-3.496;VQSLOD=0.7843;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:2,6:8:0:0,0,0	./.	0/0:8,0:1:0:0,0,0	0/1:13,0:4:6.29:6,0,26	./.	1/1:12,0:11:2.94:18,3,0	./.	1/1:37,0:35:4.47:857,4,0	1/1:9,0:9:2.61:20,3,0	0/1:11,0:11:22.51:210,0,23	./.	1/1:11,0:11:8.81:53,9,0	1/1:6,0:6:2.94:18,3,0	1/1:7,0:7:2.94:18,3,0	0/0:9,0:9:27.09:0,27,556	1/1:2,0:2:3.01:61,3,0	1/1:8,0:8:0.47:1,0,0	1/1:9,0:8:2.04:6,2,0	1/1:4,0:8:15.05:323,15,0	./.	./.	0/1:3,0:3:0:0,0,0	1/1:5,0:5:5.88:36,6,0	./.	1/1:7,0:7:4.98:24,5,0	0/1:12,0:7:11.75:27,0,12	1/1:1,0:4:3.01:60,3,0	1/1:8,0:8:12:154,12,0
chr10	32484382	.	A	ATATATGTGTGTG	2913.52	PASS	AB=0.917;AC=18;AF=0.474;AN=38;BaseQRankSum=0.433;DP=283;FS=3.977;HRun=0;HaplotypeScore=94.9698;InbreedingCoeff=0.3800;MQ=50.98;MQ0=3;MQRankSum=-5.114;QD=20.66;ReadPosRankSum=1.150;VQSLOD=2.1958;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:12.01:0,12,192	./.	0/0:4,0:1:3.01:0,3,30	0/1:8,0:4:6.06:6,0,81	./.	./.	./.	0/1:38,0:36:99:243,0,1261	1/1:3,6:12:5.85:82,6,0	1/1:5,2:21:39.97:1353,40,0	./.	./.	0/0:3,5:10:0:0,0,0	0/0:2,8:11:0:0,0,0	0/0:12,0:12:33.10:0,33,1077	1/1:2,5:7:3.01:180,3,0	1/1:2,6:8:0.47:1,0,0	./.	0/1:11,0:11:83.12:83,0,372	0/0:9,0:9:21.06:0,21,428	0/0:4,0:4:3:0,3,25	./.	./.	0/1:2,2:4:0:0,0,0	1/1:1,1:9:3.01:72,3,0	1/1:10,0:9:18.53:423,19,0	0/0:6,0:6:11.07:0,11,214	1/1:4,0:12:15.02:599,15,0
chr10	32484391	.	T	TGTGT	1029.18	PASS	AB=1.000;AC=33;AF=0.660;AN=50;BaseQRankSum=7.588;DP=279;FS=0.768;HRun=0;HaplotypeScore=72.4469;InbreedingCoeff=0.4513;MQ=53.80;MQ0=2;MQRankSum=-5.474;QD=6.13;ReadPosRankSum=-3.151;VQSLOD=0.9613;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:11.91:0,12,147	1/1:3,0:3:4.07:12,4,0	0/0:4,0:1:2.04:0,2,6	0/0:5,0:3:3.01:0,3,46	./.	1/1:18,0:18:2.99:24,3,0	1/1:7,0:7:6.11:18,6,0	0/0:36,0:34:57.08:0,57,832	1/1:12,0:12:8.94:77,9,0	1/1:22,0:22:29.95:398,30,0	./.	1/1:11,0:11:8.97:71,9,0	1/1:9,0:9:2.87:24,3,0	1/1:11,0:11:2.99:24,3,0	0/0:18,0:18:33.08:0,33,495	1/1:6,0:6:3.01:54,3,0	1/1:9,0:8:0.47:1,0,0	1/1:6,0:6:2.94:18,3,0	0/1:12,0:12:13.24:13,0,230	0/0:11,0:11:21.06:0,21,273	0/0:5,0:5:3:0,3,25	./.	1/1:7,0:7:5.99:48,6,0	0/1:3,0:3:0:0,0,0	1/1:8,0:8:5.94:42,6,0	1/1:5,0:5:9.03:120,9,0	0/1:7,0:7:13.92:14,0,111	1/1:12,0:12:14.08:228,14,0
chr10	32486477	.	TTCTA	T	1193.29	PASS	AB=1.000;AC=33;AF=0.635;AN=52;BaseQRankSum=-2.261;DP=692;FS=5.982;HRun=0;HaplotypeScore=296.1478;InbreedingCoeff=0.0186;MQ=48.21;MQ0=18;MQRankSum=-0.050;QD=2.35;ReadPosRankSum=-2.048;VQSLOD=1.3256;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:22:9.39:0,9,68	1/1:14,0:14:0.89:2,1,0	./.	./.	1/1:37,0:37:0.26:1,0,0	0/1:30,0:29:11.60:12,0,37	1/1:13,0:12:2.37:8,2,0	0/0:35,0:27:0.74:0,1,2	1/1:27,0:26:12.29:82,12,0	0/1:39,0:38:45.32:174,0,45	1/1:27,0:27:8.28:43,8,0	0/0:37,0:37:5.07:0,5,34	1/1:34,0:34:1.26:111,1,0	0/1:19,0:19:11.67:12,0,26	1/1:13,19:30:3.48:47,3,0	0/1:23,0:23:12.04:16,0,12	0/1:23,0:23:7.57:28,0,8	1/1:9,0:8:1.81:5,2,0	0/1:14,0:13:4.67:59,0,5	0/1:21,0:21:15.67:29,0,16	0/0:16,0:16:8.91:0,9,61	0/0:37,0:37:1.12:0,1,2	1/1:15,0:14:6.06:26,6,0	1/1:15,0:15:0.89:2,1,0	1/1:22,0:21:2.66:6,3,0	0/1:42,0:42:75.50:75,0,99	1/1:38,0:38:49.37:579,49,0	0/1:14,0:13:11.57:12,0,12
chr10	32486693	.	GA	G	3613.70	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=3.318;DP=686;FS=3.704;HRun=8;HaplotypeScore=98.6026;InbreedingCoeff=0.9909;MQ=68.96;MQ0=0;MQRankSum=0.869;QD=25.45;ReadPosRankSum=-0.838;VQSLOD=3.4814;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,16:17:45.07:435,45,0	0/0:18,0:18:54.17:0,54,652	0/0:14,1:15:13.70:0,14,392	0/0:9,0:9:14.16:0,14,172	0/0:46,0:46:99:0,129,1509	0/0:21,0:21:60.17:0,60,712	0/0:14,0:14:39.12:0,39,470	1/1:6,30:36:90.07:844,90,0	0/0:29,0:29:78.22:0,78,921	0/0:48,0:48:99:0,132,1579	0/0:29,0:29:84.25:0,84,1003	0/0:21,0:21:54.17:0,54,652	0/0:27,0:27:66.19:0,66,784	0/0:27,0:27:72.19:0,72,855	0/0:36,0:35:96.29:0,96,1159	0/0:21,0:21:51.16:0,51,616	0/0:25,0:25:69.21:0,69,833	0/0:19,0:19:54.15:0,54,639	1/1:2,18:20:51.08:493,51,0	1/1:1,32:33:96.09:915,96,0	1/1:0,7:7:21.03:203,21,0	0/0:32,0:32:96.29:0,96,1158	0/0:19,0:19:48.62:0,49,579	0/0:17,0:17:45.14:0,45,544	0/0:22,0:22:63.19:0,63,761	0/0:27,0:27:72.17:0,72,842	1/1:2,27:29:75.12:724,75,0	0/0:22,0:22:48.15:0,48,580
chr10	32488319	.	AT	A	3449.82	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=12.514;DP=539;FS=11.739;HRun=7;HaplotypeScore=50.1997;InbreedingCoeff=0.9845;MQ=71.20;MQ0=0;MQRankSum=1.233;QD=24.82;ReadPosRankSum=0.914;VQSLOD=3.1361;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,19:22:54.12:551,54,0	0/0:13,0:13:36.12:0,36,453	0/0:8,0:8:12.04:0,12,145	0/0:6,0:6:12:0,12,114	0/0:35,0:35:96.22:0,96,1187	0/0:18,0:18:54.17:0,54,679	0/0:6,0:6:18.06:0,18,226	1/1:3,18:22:54.11:544,54,0	0/0:13,0:13:39.12:0,39,490	0/0:18,0:18:51.16:0,51,642	0/0:22,0:22:66.19:0,66,817	0/0:26,0:26:69.21:0,69,856	0/0:33,0:33:93.30:0,93,1169	0/0:9,0:9:21.07:0,21,261	0/0:20,0:20:57.18:0,57,717	0/0:19,0:19:54.17:0,54,679	0/0:18,0:18:51.16:0,51,641	0/0:18,0:18:45.12:0,45,549	1/1:4,16:20:48.10:490,48,0	1/1:4,34:38:99:1008,99,0	1/1:1,12:13:30.07:306,30,0	0/0:23,0:23:63.20:0,63,785	0/0:22,0:22:63.20:0,63,792	0/0:17,0:17:45.14:0,45,565	0/0:14,0:14:30.10:0,30,377	0/0:33,0:33:93.29:0,93,1160	1/1:2,22:24:54.12:551,54,0	0/0:9,0:9:24.05:0,24,276
chr10	32489090	.	GA	G	3714.92	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=7.619;DP=500;FS=40.329;HRun=4;HaplotypeScore=56.9430;InbreedingCoeff=0.9960;MQ=91.51;MQ0=0;MQRankSum=-2.318;QD=30.45;ReadPosRankSum=-0.833;VQSLOD=0.7658;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,14:14:39.12:468,39,0	0/0:8,0:8:21.07:0,21,294	0/0:25,0:25:57.43:0,57,811	0/0:20,0:20:57.15:0,57,757	0/0:9,0:9:24.06:0,24,302	0/0:18,0:18:51.17:0,51,713	0/0:22,0:22:66.21:0,66,905	1/1:0,17:17:45.10:517,45,0	0/0:13,0:13:39.13:0,39,546	0/0:24,0:24:69.22:0,69,952	0/0:7,0:7:18.05:0,18,239	0/0:24,0:24:72.23:0,72,993	0/0:18,0:18:54.18:0,54,756	0/0:24,0:24:69.20:0,69,940	0/0:12,0:12:36.10:0,36,472	0/0:14,0:14:42.14:0,42,588	0/0:24,0:24:72.24:0,72,1007	0/0:27,0:27:75.25:0,75,1050	1/1:5,19:24:68.22:771,68,0	1/1:2,10:12:27.08:324,27,0	1/1:6,29:35:84.21:991,84,0	0/0:9,0:9:21.07:0,21,294	0/0:14,0:14:39.13:0,39,544	0/0:22,0:22:66.21:0,66,908	0/0:12,0:12:36.10:0,36,475	0/0:16,0:16:48.16:0,48,672	1/1:3,17:20:54.16:645,54,0	0/0:16,0:16:42.14:0,42,588
chr10	32489157	.	T	TGTGA	5682.63	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-9.459;DP=477;FS=4.371;HRun=0;HaplotypeScore=81.8734;InbreedingCoeff=0.9026;MQ=66.29;MQ0=0;MQRankSum=-7.290;QD=46.96;ReadPosRankSum=-1.398;VQSLOD=4.8204;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,18:27:60.21:1554,60,0	0/0:3,0:3:9.03:0,9,165	0/0:4,0:5:9.03:0,9,155	0/0:7,0:7:18.03:0,18,283	0/0:6,0:6:9.03:0,9,165	0/0:6,0:6:15.05:0,15,276	0/0:36,0:36:99:0,108,1986	1/1:9,15:24:48.16:1233,48,0	0/0:19,0:19:51.17:0,51,938	0/0:16,0:16:45.15:0,45,817	0/0:2,0:2:3.01:0,3,55	0/0:25,0:25:72.23:0,72,1284	0/0:19,0:19:57.18:0,57,1008	0/0:25,0:25:75.24:0,75,1350	0/0:16,0:16:48.16:0,48,883	0/0:13,0:13:36.12:0,36,663	0/0:27,0:27:69.24:0,69,1270	0/0:33,0:33:90.31:0,90,1644	1/1:7,13:20:39.13:998,39,0	1/1:5,4:9:6.02:158,6,0	1/1:6,19:27:32.94:871,33,0	0/0:6,0:6:15.05:0,15,276	0/0:12,0:12:24.08:0,24,441	0/0:35,0:35:99:0,99,1820	0/0:16,0:16:42.14:0,42,773	0/0:18,0:18:54.19:0,54,984	1/1:2,12:14:33.11:869,33,0	0/0:11,0:11:33.02:0,33,478
chr10	32490077	.	T	TA	3039.62	PASS	AB=0.900;AC=13;AF=0.232;AN=56;BaseQRankSum=-8.547;DP=575;FS=12.125;HRun=9;HaplotypeScore=68.2756;InbreedingCoeff=0.8814;MQ=84.89;MQ0=1;MQRankSum=0.341;QD=20.00;ReadPosRankSum=-1.206;VQSLOD=2.9592;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,32:33:78.21:863,78,0	0/0:7,0:7:15.47:0,15,131	0/0:32,0:30:61.28:0,61,486	0/0:13,0:14:9.39:0,9,165	0/0:18,0:18:47.96:0,48,408	0/0:18,0:18:21.62:0,22,318	0/0:14,0:14:26.94:0,27,227	1/1:5,17:23:27.88:493,28,0	0/0:18,0:18:38.96:0,39,338	0/0:15,0:16:41.02:0,41,345	0/0:25,0:25:65.93:0,66,573	0/0:17,0:17:50.96:0,51,435	0/0:22,0:22:55.46:0,55,508	0/0:19,1:20:17.83:0,18,381	0/0:23,0:23:53.95:0,54,465	0/0:26,0:27:74.01:0,74,628	0/0:21,0:22:62.02:0,62,527	0/0:24,0:24:65.98:0,66,572	1/1:3,15:19:24.91:479,25,0	1/1:3,14:18:38.87:386,39,0	1/1:3,10:13:24.06:266,24,0	0/1:8,1:9:15.20:15,0,112	0/0:19,0:19:41.64:0,42,364	0/0:27,0:28:80.02:0,80,682	0/0:22,0:22:50.98:0,51,442	0/0:29,1:30:38.78:0,39,566	1/1:6,30:36:45.82:727,46,0	0/0:7,0:7:11.98:0,12,104
chr10	32490293	.	CT	C	13433.18	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=5.073;DP=671;FS=7.665;HRun=8;HaplotypeScore=109.9034;InbreedingCoeff=0.9861;MQ=69.92;MQ0=3;MQRankSum=-4.556;QD=24.69;ReadPosRankSum=4.535;VQSLOD=4.4144;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,28:34:80.79:770,81,0	1/1:3,6:9:18.03:173,18,0	0/0:54,0:43:86.52:0,87,968	0/0:38,0:22:38.62:0,39,456	1/1:2,23:25:66.10:637,66,0	1/1:0,19:19:54.09:521,54,0	1/1:2,18:20:47.11:441,47,0	1/1:10,26:36:75.09:718,75,0	1/1:0,18:19:56.12:527,56,0	1/1:2,18:20:54.09:522,54,0	1/1:2,20:22:57.09:550,57,0	1/1:1,13:14:39.06:377,39,0	1/1:1,17:18:48.08:462,48,0	1/1:0,12:12:33.05:318,33,0	0/0:35,0:35:99:0,99,1173	1/1:2,15:17:45.07:435,45,0	1/1:1,29:30:78.12:753,78,0	1/1:1,25:26:66.11:637,66,0	1/1:2,15:16:45.07:434,45,0	1/1:2,24:26:66.10:637,66,0	1/1:2,16:18:48.07:464,48,0	1/1:2,21:23:60.09:579,60,0	1/1:4,22:26:57.09:550,57,0	1/1:0,28:28:78.13:753,78,0	1/1:1,21:22:60.10:579,60,0	1/1:2,26:28:78.13:753,78,0	1/1:4,26:30:75.11:724,75,0	1/1:0,5:5:12.02:116,12,0
chr10	32491859	.	GA	G	2857.17	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=6.568;DP=758;FS=8.239;HRun=10;HaplotypeScore=133.1554;InbreedingCoeff=0.8726;MQ=76.39;MQ0=3;MQRankSum=0.655;QD=17.32;ReadPosRankSum=-4.523;VQSLOD=1.7069;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:4,22:26:56.98:494,57,0	0/1:16,0:16:6.77:7,0,139	0/0:53,0:29:10.79:0,11,482	0/0:34,0:21:24.96:0,25,251	0/0:33,0:33:29.16:0,29,320	0/0:31,0:31:49.39:0,49,311	0/0:26,0:26:41.51:0,42,281	1/1:2,22:24:62.98:544,63,0	0/0:26,0:26:32.62:0,33,246	0/0:34,0:34:2.42:0,2,232	0/0:18,0:18:47.47:0,47,236	0/0:26,0:26:57.24:0,57,289	0/0:25,1:26:23.52:0,24,289	0/0:25,0:25:34.96:0,35,254	0/0:34,0:34:92.05:0,92,991	0/0:30,0:30:55.06:0,55,349	0/0:31,0:31:44.47:0,44,318	0/0:19,0:19:26.36:0,26,215	1/1:3,13:16:37.98:304,38,0	1/1:4,22:26:62.96:545,63,0	1/1:2,23:26:62.02:526,62,0	0/0:26,0:26:29.85:0,30,240	0/0:29,0:29:56.04:0,56,377	0/0:31,0:31:42.71:0,43,300	0/0:32,0:32:57.05:0,57,345	0/0:21,0:21:22.02:0,22,155	1/1:4,27:31:71.98:624,72,0	0/0:8,0:8:22.99:0,23,125
chr10	32492575	.	T	TACACACACACACACACAC	14817.86	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=1.818;DP=557;FS=0.710;HRun=0;HaplotypeScore=254.5972;InbreedingCoeff=0.6008;MQ=60.35;MQ0=9;MQRankSum=-5.648;QD=31.66;ReadPosRankSum=0.255;VQSLOD=3.7602;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:17,6:26:10.24:714,10,0	1/1:18,0:18:18.05:680,18,0	0/0:38,0:31:33.05:0,33,635	0/0:20,0:16:16.29:0,16,399	1/1:17,0:17:6.02:229,6,0	1/1:18,0:16:3.01:189,3,0	1/1:12,0:11:12.91:202,13,0	1/1:27,0:23:12.03:170,12,0	1/1:15,0:15:12.04:774,12,0	1/1:19,0:19:37.67:1182,38,0	1/1:15,0:15:3.01:180,3,0	1/1:18,0:16:21.04:668,21,0	1/1:16,0:15:24.78:1028,25,0	1/1:18,0:18:8.84:299,9,0	0/0:27,0:27:54.18:0,54,2310	1/1:27,0:26:18.53:1116,19,0	1/1:13,0:22:21.07:1266,21,0	1/1:17,0:17:27.04:1028,27,0	1/1:17,0:17:39.08:1316,39,0	1/1:11,15:28:6.02:508,6,0	1/1:12,0:10:3.20:25,3,0	1/1:15,0:14:5.81:70,6,0	1/1:24,0:22:5.50:252,5,0	1/1:18,0:17:6.02:327,6,0	1/1:23,0:21:3.01:185,3,0	1/1:13,0:13:24.08:732,24,0	1/1:12,11:25:21.07:1490,21,0	1/1:5,0:5:6.02:188,6,0
chr10	32493246	.	TC	T	11961.13	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=12.539;DP=493;FS=8.996;HRun=1;HaplotypeScore=48.4338;InbreedingCoeff=0.9909;MQ=85.59;MQ0=0;MQRankSum=-3.864;QD=38.46;ReadPosRankSum=5.729;VQSLOD=4.4714;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:51.17:0,51,767	1/1:0,7:7:21.02:271,21,0	0/0:18,0:18:47.30:0,47,724	0/0:13,0:13:20.69:0,21,399	1/1:0,36:36:99:1400,105,0	1/1:0,18:18:51.17:713,51,0	1/1:0,11:11:30.10:419,30,0	0/0:30,0:30:90.28:0,90,1319	1/1:0,10:10:27.09:377,27,0	1/1:0,22:22:66.22:923,66,0	1/1:0,28:28:84.15:1101,84,0	1/1:0,19:19:48.16:671,48,0	1/1:0,18:18:45.15:628,45,0	1/1:0,15:15:39.13:545,39,0	0/0:16,0:16:48.16:0,48,735	1/1:0,22:22:57.19:797,57,0	1/1:0,19:19:54.18:754,54,0	1/1:0,17:17:45.15:623,45,0	0/0:24,0:24:72.13:0,72,1014	0/0:27,0:27:78.26:0,78,1182	0/0:5,0:5:15.05:0,15,230	1/1:0,10:10:30.05:394,30,0	1/1:0,17:17:45.15:629,45,0	1/1:0,11:11:33.11:457,33,0	1/1:0,12:12:33.11:461,33,0	1/1:0,15:15:45.15:629,45,0	0/0:32,0:31:96.31:0,96,1445	1/1:0,4:4:12.04:168,12,0
chr10	32494658	.	AAAATAAAT	A	4673.65	PASS	AC=46;AF=0.920;AN=50;BaseQRankSum=0.984;DP=236;FS=1.733;HRun=0;HaplotypeScore=73.7826;InbreedingCoeff=0.3633;MQ=57.26;MQ0=0;MQRankSum=-4.117;QD=22.15;ReadPosRankSum=-1.314;VQSLOD=3.9149;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,3:7:3.01:75,3,0	1/1:2,3:5:6.02:149,6,0	./.	./.	0/0:5,0:7:5.51:0,6,49	1/1:3,5:8:12.04:299,12,0	1/1:4,1:5:3.01:75,3,0	1/1:28,0:28:12.02:170,12,0	1/1:4,2:6:6.02:149,6,0	1/1:7,4:11:12.04:283,12,0	1/1:4,3:7:6.02:143,6,0	1/1:2,4:6:12.04:299,12,0	1/1:7,7:14:21.07:500,21,0	1/1:3,1:4:3.01:75,3,0	0/0:8,0:8:15.05:0,15,607	1/1:3,2:5:6.02:149,6,0	1/1:7,6:13:9.03:224,9,0	1/1:10,3:13:6.02:149,6,0	1/1:11,4:15:12.04:289,12,0	1/1:5,1:6:3.01:75,3,0	1/1:0,1:1:3.01:70,3,0	./.	1/1:3,4:7:5.22:148,5,0	1/1:3,0:3:2.99:24,3,0	1/1:8,4:12:12.04:294,12,0	1/1:9,3:12:9.03:222,9,0	1/1:6,5:11:15.05:369,15,0	1/1:6,6:12:18.06:444,18,0
chr10	32496745	.	C	CAG	582.72	PASS	AB=0.931;AC=31;AF=0.775;AN=40;BaseQRankSum=-0.376;DP=388;FS=14.289;HRun=0;HaplotypeScore=149.7994;InbreedingCoeff=0.2693;MQ=39.29;MQ0=16;MQRankSum=0.197;QD=2.27;ReadPosRankSum=0.841;VQSLOD=1.7217;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:19,0:19:0:0,0,0	1/1:7,0:7:0.47:2,0,0	./.	./.	./.	1/1:14,0:12:0.47:1,0,0	0/0:13,0:12:2.04:0,2,6	1/1:19,0:16:4.53:25,5,0	0/1:14,0:13:0:0,0,0	1/1:14,0:13:0.47:1,0,0	./.	1/1:10,0:10:0.47:1,0,0	1/1:13,0:12:5.21:32,5,0	./.	0/1:21,24:44:61.34:471,0,61	1/1:6,0:4:0.47:1,0,0	1/1:10,0:9:6.36:37,6,0	1/1:10,0:10:6.68:28,7,0	0/1:8,0:8:0:0,0,0	1/1:21,0:21:0.47:1,0,0	./.	1/1:13,0:12:2.04:6,2,0	./.	0/1:12,0:12:0:0,0,0	./.	1/1:11,0:11:0.76:15,1,0	1/1:10,0:10:5.62:46,6,0	0/0:4,0:3:1.51:0,2,4
chr10	32497603	.	AAGGAATGGCACTAGATCCAAC	A	54553.80	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=14.894;DP=718;FS=7.409;HRun=0;HaplotypeScore=441.2623;InbreedingCoeff=0.9396;MQ=82.80;MQ0=0;MQRankSum=-14.559;QD=89.14;ReadPosRankSum=6.488;VQSLOD=3.5939;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,28:38:51.18:2891,51,0	1/1:3,8:11:12.04:714,12,0	0/0:35,0:35:99:0,102,6408	0/0:26,0:26:71.87:0,72,5247	1/1:5,19:24:45.11:2377,45,0	1/1:6,27:33:48.16:2856,48,0	1/1:3,19:22:30.10:1784,30,0	1/1:7,24:31:71.80:1402,72,0	1/1:13,21:34:42.14:2500,42,0	1/1:9,24:33:65.99:2692,66,0	1/1:3,16:19:33.11:1808,33,0	1/1:6,26:32:69.24:4096,69,0	1/1:2,18:20:24.08:1428,24,0	1/1:5,25:30:63.22:3743,63,0	0/0:45,0:45:99:0,135,11841	1/1:7,29:36:66.23:3928,66,0	1/1:4,8:12:12.04:543,12,0	1/1:1,7:8:12.04:715,12,0	1/1:4,16:20:47.94:1457,48,0	1/1:5,23:28:57.07:2907,57,0	1/1:3,15:18:15.01:722,15,0	1/1:5,14:19:39.05:1870,39,0	1/1:5,23:28:56.93:3195,57,0	1/1:9,12:21:18.01:831,18,0	1/1:8,22:30:54.19:3192,54,0	1/1:1,29:30:77.90:2617,78,0	1/1:2,30:32:63.69:3751,64,0	1/1:0,3:3:9.03:536,9,0
chr10	32498002	.	T	TG	24049.58	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=6.527;DP=690;FS=0.000;HRun=1;HaplotypeScore=137.1658;InbreedingCoeff=0.9971;MQ=86.99;MQ0=0;MQRankSum=-8.994;QD=39.82;ReadPosRankSum=4.860;VQSLOD=4.1726;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,32:33:87.29:1303,87,0	1/1:0,8:8:20.99:286,21,0	0/0:28,0:28:81.24:0,81,1032	0/0:20,0:20:54.12:0,54,639	1/1:2,28:30:72.20:1053,72,0	1/1:1,23:24:63.15:917,63,0	1/1:0,24:24:66.22:988,66,0	1/1:1,22:23:66.21:964,66,0	1/1:2,16:18:39.13:583,39,0	1/1:0,20:20:60.20:897,60,0	1/1:0,26:26:63.21:930,63,0	1/1:1,22:23:63.21:944,63,0	1/1:1,21:22:60.20:898,60,0	1/1:1,21:22:60.20:899,60,0	0/0:38,0:38:99:0,114,1437	1/1:0,20:20:51.17:764,51,0	1/1:1,31:32:93.31:1384,93,0	1/1:0,7:7:21.07:314,21,0	1/1:1,16:17:51.17:757,51,0	1/1:1,22:23:66.22:977,66,0	1/1:1,38:39:99:1483,99,0	1/1:1,26:27:72.24:1079,72,0	1/1:1,25:26:57:853,57,0	1/1:0,18:17:48.16:708,48,0	1/1:1,26:27:75.19:1094,75,0	1/1:0,34:34:99:1458,102,0	1/1:1,32:32:87.29:1303,87,0	1/1:0,28:28:81.27:1213,81,0
chr10	32498359	.	T	TTTTA	37806.71	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-9.920;DP=674;FS=2.432;HRun=0;HaplotypeScore=87.1102;InbreedingCoeff=0.9984;MQ=81.33;MQ0=2;MQRankSum=-7.880;QD=62.49;ReadPosRankSum=2.855;VQSLOD=7.0555;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,19:21:57.11:1374,57,0	1/1:2,13:15:39.08:924,39,0	0/0:27,0:27:57.66:0,58,891	0/0:15,0:15:24.56:0,25,473	1/1:3,35:39:99:2408,102,0	1/1:4,26:30:75.26:1974,75,0	1/1:0,11:11:27.09:720,27,0	1/1:14,31:46:99:2706,115,0	1/1:3,21:24:57.20:1463,57,0	1/1:4,28:32:87.28:2241,87,0	1/1:0,22:22:60.16:1505,60,0	1/1:2,17:19:45.15:1199,45,0	1/1:2,17:19:48.16:1267,48,0	1/1:1,26:28:72.25:1894,72,0	0/0:27,0:27:78.27:0,78,1456	1/1:1,20:21:48.16:1264,48,0	1/1:5,19:25:51.18:1307,51,0	1/1:1,10:11:30.06:713,30,0	1/1:1,18:20:57.16:1315,57,0	1/1:4,29:33:84.19:2081,84,0	1/1:1,16:18:48.16:1254,48,0	1/1:4,14:19:42.10:1021,42,0	1/1:3,24:29:72.25:1838,72,0	1/1:0,21:21:54.19:1440,54,0	1/1:1,20:23:42.14:1120,42,0	1/1:2,27:28:81.27:2019,81,0	1/1:4,30:33:78.27:2041,78,0	1/1:0,15:15:27.09:720,27,0
chr10	32499093	.	T	TA	17769.17	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-10.289;DP=613;FS=0.513;HRun=3;HaplotypeScore=53.4971;InbreedingCoeff=0.9976;MQ=82.95;MQ0=0;MQRankSum=-6.827;QD=32.66;ReadPosRankSum=4.770;VQSLOD=4.7051;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,10:12:24.08:325,24,0	1/1:0,12:11:30.10:405,30,0	0/0:21,0:20:51.83:0,52,539	0/0:18,0:17:30.76:0,31,356	1/1:2,29:31:84.06:1050,84,0	1/1:1,21:22:51.17:689,51,0	1/1:2,16:18:45.15:608,45,0	1/1:2,36:38:99:1318,102,0	1/1:2,18:20:42.07:545,42,0	1/1:2,26:28:75.21:968,75,0	1/1:5,21:26:49.91:747,50,0	1/1:0,16:16:30.10:406,30,0	1/1:1,23:24:57.17:771,57,0	1/1:0,25:25:51.17:690,51,0	0/0:30,0:30:84.24:0,84,981	1/1:1,18:19:51.17:690,51,0	1/1:0,17:17:45.12:590,45,0	1/1:0,9:9:24.08:324,24,0	1/1:2,24:26:72.22:944,72,0	1/1:2,29:31:78.05:987,78,0	1/1:0,16:16:30.10:406,30,0	1/1:1,27:28:78.17:1024,78,0	1/1:2,22:24:63.21:852,63,0	1/1:2,18:20:45.15:609,45,0	1/1:0,16:16:33.11:446,33,0	1/1:1,25:26:75.22:978,75,0	1/1:3,24:25:72.20:951,72,0	1/1:0,13:13:33.11:446,33,0
chr10	32499281	.	C	CT	3049.31	PASS	AB=0.664;AC=32;AF=0.571;AN=56;BaseQRankSum=-6.182;DP=547;FS=4.518;HRun=14;HaplotypeScore=77.9701;InbreedingCoeff=0.1477;MQ=65.80;MQ0=5;MQRankSum=1.245;QD=7.16;ReadPosRankSum=-0.604;VQSLOD=2.7014;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:10.61:0,11,57	1/1:1,5:7:7.64:79,8,0	0/0:20,0:7:1.87:0,2,41	0/0:17,0:7:5.71:0,6,15	1/1:9,22:31:34.50:392,35,0	1/1:3,16:20:20.84:172,21,0	0/1:4,8:13:24.34:86,0,24	0/1:21,7:29:40.60:73,0,41	0/1:6,18:25:3.31:235,0,3	1/1:12,15:27:41.11:363,41,0	0/1:7,11:19:20.18:135,0,20	0/1:7,11:18:0.55:79,0,1	0/1:11,14:27:22.31:116,0,22	0/1:3,11:14:4.27:91,0,4	0/0:16,0:16:6.30:0,6,148	1/1:4,16:20:5.61:167,6,0	0/1:6,10:16:1.43:101,0,1	1/1:2,7:10:10.88:113,11,0	0/1:12,2:15:28.78:29,0,80	0/0:27,0:29:49.23:0,49,301	0/1:14,4:18:3.22:3,0,111	1/1:14,4:18:25.34:258,25,0	0/1:6,12:20:1.80:123,0,2	1/1:6,12:19:4.75:73,5,0	0/1:8,15:26:28.26:118,0,28	1/1:6,13:19:19.17:269,19,0	0/0:22,1:24:13.80:0,14,208	1/1:5,9:15:17.84:146,18,0
chr10	32500326	.	GAC	G	368.75	PASS	AB=0.926;AC=12;AF=0.231;AN=52;BaseQRankSum=1.769;DP=552;FS=2.978;HRun=0;HaplotypeScore=84.4230;InbreedingCoeff=-0.1360;MQ=56.25;MQ0=11;MQRankSum=0.480;QD=1.63;ReadPosRankSum=1.063;VQSLOD=1.7473;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:38:22.79:0,23,222	0/0:8,0:8:11.79:0,12,168	./.	./.	0/1:13,0:14:5.08:5,0,66	0/0:15,0:15:18.06:0,18,264	0/1:25,3:28:11.51:12,0,198	0/0:24,0:23:17.92:0,18,192	0/1:20,0:20:9.48:9,0,183	0/0:16,0:16:16.21:0,16,198	0/1:8,1:9:26.49:26,0,37	0/1:18,1:19:8.65:9,0,234	0/0:8,0:12:9.47:0,9,95	0/1:16,2:18:41.44:41,0,236	1/1:20,6:27:23.68:222,24,0	0/1:23,5:28:99:129,0,190	0/1:27,2:29:28.95:29,0,359	0/0:13,0:14:15.04:0,15,204	0/0:15,0:15:6.02:0,6,76	0/0:17,0:18:6:0,6,66	0/0:38,0:37:18.02:0,18,198	0/1:15,1:15:14.47:14,0,169	0/0:14,0:14:15.03:0,15,180	0/0:25,0:25:33.07:0,33,438	0/1:17,1:16:14.44:14,0,195	0/0:25,0:25:1.85:0,2,220	0/0:9,0:15:2.77:0,3,26	0/0:6,0:4:2.98:0,3,21
chr10	32500615	.	AT	A	13484.74	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=6.425;DP=551;FS=15.840;HRun=1;HaplotypeScore=96.7252;InbreedingCoeff=0.9836;MQ=89.56;MQ0=0;MQRankSum=-1.871;QD=40.49;ReadPosRankSum=6.074;VQSLOD=3.0544;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:78.22:0,78,1182	1/1:0,11:11:33.11:462,33,0	0/0:35,0:35:78.95:0,79,1331	0/0:20,0:20:50.33:0,50,668	1/1:0,15:15:42.14:587,42,0	1/1:0,14:14:42.14:587,42,0	1/1:0,21:21:63.17:859,63,0	0/0:31,0:31:87.26:0,87,1302	1/1:0,13:13:39.13:545,39,0	1/1:0,24:24:72.24:1006,72,0	1/1:0,13:13:33.11:462,33,0	1/1:0,18:18:54.18:755,54,0	1/1:0,19:19:57.19:796,57,0	1/1:0,20:20:57.19:797,57,0	0/0:14,0:14:42.12:0,42,626	1/1:0,17:17:51.17:713,51,0	1/1:0,25:25:72.24:1007,72,0	1/1:0,11:11:33.11:462,33,0	0/0:22,0:22:63.21:0,63,1006	0/0:16,0:16:48.16:0,48,767	0/0:35,0:35:99:0,105,1650	1/1:0,24:24:72.20:985,72,0	1/1:0,20:20:54.01:755,54,0	1/1:0,20:20:54.18:755,54,0	1/1:0,25:25:72.24:1007,72,0	1/1:0,21:21:63.20:860,63,0	0/0:16,0:15:48.15:0,48,743	1/1:0,2:2:6.02:84,6,0
chr10	32502256	.	TA	T	2840.88	PASS	AC=30;AF=0.938;AN=32;BaseQRankSum=6.992;DP=255;FS=3.182;HRun=6;HaplotypeScore=37.0518;InbreedingCoeff=0.5151;MQ=29.60;MQ0=28;MQRankSum=-7.335;QD=16.42;ReadPosRankSum=-0.113;VQSLOD=2.6232;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	1/1:1,10:10:30.08:322,30,0	./.	./.	1/1:2,15:16:24.06:257,24,0	./.	./.	./.	1/1:0,3:3:3.01:32,3,0	1/1:3,9:9:18.04:193,18,0	1/1:2,19:21:29.97:305,30,0	./.	1/1:1,3:4:2.96:19,3,0	1/1:1,3:4:6.01:64,6,0	0/0:26,0:26:69.22:0,69,904	./.	./.	./.	1/1:5,2:5:5.96:51,6,0	1/1:1,16:14:33.02:340,33,0	./.	1/1:1,11:11:18:181,18,0	1/1:1,13:13:30.08:322,30,0	./.	1/1:2,28:26:51.13:547,51,0	1/1:1,9:6:14.99:147,15,0	1/1:0,10:6:12.03:129,12,0	1/1:0,1:1:3.01:32,3,0
chr10	32503104	.	GC	G	1165.77	PASS	AC=30;AF=0.714;AN=42;BaseQRankSum=3.962;DP=398;FS=0.983;HRun=2;HaplotypeScore=27.1107;InbreedingCoeff=0.6588;MQ=20.41;MQ0=111;MQRankSum=-2.144;QD=5.95;ReadPosRankSum=0.996;VQSLOD=0.7400;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:18:29.86:0,30,365	1/1:0,6:3:3.01:39,3,0	./.	./.	1/1:4,11:7:12.51:156,13,0	1/1:1,12:10:6.02:78,6,0	1/1:6,4:3:3.01:39,3,0	0/0:25,0:8:24.08:0,24,358	1/1:2,17:11:6.02:78,6,0	1/1:5,13:8:18.06:234,18,0	1/1:1,11:9:12.04:155,12,0	1/1:1,12:7:3.01:39,3,0	1/1:4,13:10:6.02:78,6,0	./.	0/0:34,0:30:57.11:0,57,801	1/1:3,15:11:9.03:117,9,0	./.	1/1:4,2:1:3.01:39,3,0	0/0:26,0:10:27.09:0,27,404	0/0:11,0:6:12.04:0,12,179	./.	1/1:1,14:5:6.02:77,6,0	./.	1/1:2,1:1:3.01:39,3,0	1/1:7,13:8:6.02:78,6,0	1/1:4,7:2:6.02:78,6,0	0/0:22,0:5:8.99:0,9,110	./.
chr10	32503604	.	GA	G	2698.82	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=5.763;DP=531;FS=8.618;HRun=8;HaplotypeScore=104.2611;InbreedingCoeff=0.9959;MQ=60.45;MQ0=0;MQRankSum=-3.104;QD=22.30;ReadPosRankSum=-1.353;VQSLOD=2.6216;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,28:33:81.12:782,81,0	0/0:12,0:12:35.72:0,36,257	0/0:20,0:19:36.03:0,36,414	0/0:11,0:9:18.05:0,18,211	0/0:25,0:25:51.82:0,52,380	0/0:28,0:28:69.39:0,69,458	0/0:12,0:12:23.76:0,24,166	1/1:3,20:21:51.08:491,51,0	0/0:19,0:19:46.65:0,47,323	0/0:33,0:33:76.40:0,76,489	0/0:25,0:25:46.48:0,46,355	0/0:17,0:17:33.80:0,34,217	0/0:24,0:24:66.80:0,67,473	0/0:11,0:11:28.77:0,29,189	0/0:11,0:11:33.09:0,33,387	0/0:21,0:21:53.45:0,53,368	0/0:16,0:16:32.69:0,33,226	0/0:17,0:17:37.06:0,37,221	1/1:3,10:13:33.05:318,33,0	1/1:2,18:20:54.09:520,54,0	1/1:3,8:11:24.04:232,24,0	0/0:15,0:15:35.86:0,36,296	0/0:18,0:18:35.73:0,36,263	0/0:12,0:12:32.71:0,33,232	0/0:26,0:26:55.35:0,55,396	0/0:25,0:25:63.20:0,63,401	1/1:2,19:21:57.07:544,57,0	0/0:11,0:12:19.98:0,20,178
chr10	32503662	.	TA	T	11678.24	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=1.840;DP=514;FS=19.271;HRun=8;HaplotypeScore=69.2987;InbreedingCoeff=0.8917;MQ=59.49;MQ0=0;MQRankSum=-3.308;QD=23.74;ReadPosRankSum=2.970;VQSLOD=3.5671;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,22:25:54.08:521,54,0	1/1:2,10:12:27.04:261,27,0	0/0:4,0:4:8.96:0,9,88	0/0:6,0:6:3.47:0,3,102	1/1:1,40:41:96.05:908,96,0	1/1:3,29:32:78.12:753,78,0	1/1:2,10:12:30.05:290,30,0	1/1:4,16:20:48.04:451,48,0	1/1:2,19:21:51.08:493,51,0	1/1:1,26:27:78.12:753,78,0	1/1:2,29:31:78.07:743,78,0	1/1:0,18:18:54.09:521,54,0	1/1:3,15:18:42.07:406,42,0	1/1:2,17:19:48.07:464,48,0	0/0:12,0:12:36.10:0,36,427	1/1:0,8:8:21.03:203,21,0	1/1:2,21:23:57.09:550,57,0	1/1:2,20:22:57.09:550,57,0	1/1:1,13:14:39.06:377,39,0	1/1:4,23:27:72.06:681,72,0	1/1:0,5:5:11.97:106,12,0	1/1:1,19:20:51.08:492,51,0	1/1:1,17:18:45.02:425,45,0	1/1:1,5:6:15.02:145,15,0	1/1:3,16:19:42.06:405,42,0	1/1:1,17:18:51.05:485,51,0	1/1:1,21:22:57.09:550,57,0	1/1:4,10:14:15.02:145,15,0
chr10	32504021	.	GTTT	G	5393.63	PASS	AB=0.737;AC=35;AF=0.625;AN=56;BaseQRankSum=4.679;DP=488;FS=0.349;HRun=4;HaplotypeScore=175.5300;InbreedingCoeff=0.5300;MQ=61.60;MQ0=0;MQRankSum=-11.859;QD=16.91;ReadPosRankSum=5.486;VQSLOD=0.9862;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:43.32:0,43,267	1/1:3,9:12:21.47:282,21,0	0/0:8,0:8:11.06:0,11,157	0/1:11,0:11:34.12:34,0,218	1/1:9,26:35:11.16:485,11,0	1/1:4,18:22:16.34:431,16,0	1/1:3,10:13:5.56:240,6,0	0/0:39,0:39:99:0,104,1023	0/1:7,12:19:23.92:282,0,24	0/1:11,12:23:59.89:318,0,60	1/1:6,16:22:36.42:394,36,0	1/1:4,14:18:18.12:345,18,0	1/1:19,0:19:2.86:175,3,0	1/1:3,13:16:2.24:313,2,0	0/0:12,0:12:36.12:0,36,814	1/1:5,9:14:4.81:215,5,0	0/1:4,2:6:29.09:29,0,34	1/1:0,4:4:12.02:114,12,0	0/0:24,0:24:65.67:0,66,453	0/0:27,0:27:64.20:0,64,473	0/0:9,0:9:25.68:0,26,215	1/1:1,13:14:23.44:266,23,0	1/1:2,14:16:20.50:278,21,0	0/1:2,2:4:7.28:35,0,7	1/1:5,15:20:25.25:407,25,0	1/1:3,20:23:47.83:554,48,0	0/0:32,0:31:67.30:0,67,410	1/1:1,7:8:21.03:198,21,0
chr10	32504024	.	TTATA	T	15734.09	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-0.263;DP=481;FS=2.539;HRun=0;HaplotypeScore=147.4914;InbreedingCoeff=0.8399;MQ=61.69;MQ0=0;MQRankSum=-6.209;QD=36.59;ReadPosRankSum=-0.567;VQSLOD=4.8395;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,16:18:45.11:702,45,0	1/1:12,0:12:30.10:511,30,0	0/0:10,0:10:6.90:0,7,75	0/0:10,0:9:5.81:0,6,49	1/1:35,0:35:66.18:1044,66,0	1/1:21,0:21:54.14:882,54,0	1/1:12,0:12:30.10:510,30,0	1/1:13,26:39:78.18:1309,78,0	1/1:18,0:18:36.10:591,36,0	1/1:23,0:23:42.14:699,42,0	1/1:19,0:19:45.07:682,45,0	1/1:18,0:18:45.15:737,45,0	0/0:5,0:19:32.93:0,33,144	1/1:17,0:17:42.14:711,42,0	0/0:11,0:12:35.91:0,36,847	1/1:15,0:15:30.09:477,30,0	1/1:6,0:6:2.80:52,3,0	1/1:4,0:4:12.04:207,12,0	1/1:2,19:21:57.18:951,57,0	1/1:8,20:28:57.11:906,57,0	1/1:2,7:9:18.06:283,18,0	1/1:14,0:14:36.12:577,36,0	1/1:16,0:16:36.08:574,36,0	1/1:4,0:4:3.01:52,3,0	1/1:19,0:19:45.15:755,45,0	1/1:23,0:23:66.08:1065,66,0	1/1:4,27:31:66.18:1094,66,0	1/1:8,0:8:21.07:362,21,0
chr10	32504027	.	TA	T	3047.30	PASS	AB=0.759;AC=33;AF=0.589;AN=56;BaseQRankSum=9.632;DP=461;FS=1.021;HRun=1;HaplotypeScore=162.0219;InbreedingCoeff=-0.0831;MQ=55.69;MQ0=0;MQRankSum=-9.597;QD=7.36;ReadPosRankSum=7.620;VQSLOD=0.6347;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:18,0:18:23.37:23,0,45	1/1:2,9:11:29.28:171,29,0	0/1:7,0:7:5.58:6,0,81	0/0:6,0:5:7.26:0,7,73	0/1:9,26:35:38.48:266,0,38	1/1:1,18:19:29.13:265,29,0	1/1:2,10:12:7.43:174,7,0	0/1:34,0:34:10.62:11,0,236	0/1:5,12:17:37.34:179,0,37	0/1:9,12:21:99:177,0,124	1/1:3,16:19:14.20:191,14,0	0/1:5,14:19:5.02:240,0,5	0/0:20,0:20:22.65:0,23,142	0/1:4,13:17:5.22:247,0,5	0/0:12,0:12:34:0,34,529	0/1:3,11:14:25.92:107,0,26	0/1:3,2:5:7.06:7,0,48	1/1:0,4:4:11.75:71,12,0	0/1:20,0:20:19.62:20,0,36	0/1:26,0:26:16.94:17,0,59	0/0:9,0:9:1.98:0,2,49	1/1:0,14:14:28.02:151,28,0	1/1:2,16:18:5.15:151,5,0	0/1:1,2:3:10.10:10,0,23	0/1:5,15:20:2.43:186,0,2	1/1:2,21:23:40.08:406,40,0	0/1:31,0:30:23.24:23,0,54	1/1:0,7:7:20.52:122,21,0
chr10	32504929	.	A	AG	18429.07	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-11.388;DP=657;FS=1.477;HRun=5;HaplotypeScore=62.8728;InbreedingCoeff=0.9872;MQ=95.25;MQ0=0;MQRankSum=-8.406;QD=32.68;ReadPosRankSum=5.521;VQSLOD=4.9920;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,25:28:69.22:908,69,0	1/1:0,7:7:21.07:276,21,0	0/0:27,0:27:67.17:0,67,599	0/0:31,0:32:51.06:0,51,640	1/1:4,24:28:72.23:936,72,0	1/1:5,19:24:51.17:671,51,0	1/1:0,17:17:51.16:666,51,0	1/1:8,36:44:97.18:1246,97,0	1/1:2,19:21:51.17:671,51,0	1/1:7,25:32:81.25:1050,81,0	1/1:2,20:22:48.16:630,48,0	1/1:1,18:19:51.17:671,51,0	1/1:1,29:30:87.27:1128,87,0	1/1:2,20:22:60.20:790,60,0	0/0:34,0:34:96.24:0,96,1032	1/1:1,14:15:42.14:553,42,0	1/1:1,12:13:36.12:474,36,0	1/1:2,3:6:12.02:142,12,0	1/1:4,9:13:30.10:390,30,0	1/1:3,28:31:84.27:1100,84,0	1/1:1,21:22:51.17:672,51,0	1/1:3,23:26:57.19:750,57,0	1/1:0,23:23:63.20:826,63,0	1/1:2,22:24:60.20:790,60,0	1/1:2,30:32:81.26:1065,81,0	1/1:3,17:20:51.12:650,51,0	1/1:3,30:33:75.24:987,75,0	1/1:2,10:12:30.10:389,30,0
chr10	32505546	.	AAATTC	A	25231.85	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=9.437;DP=568;FS=2.881;HRun=0;HaplotypeScore=144.3934;InbreedingCoeff=0.9589;MQ=77.75;MQ0=0;MQRankSum=-11.829;QD=50.67;ReadPosRankSum=2.786;VQSLOD=5.0435;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,11:12:24.08:511,24,0	1/1:0,10:10:24.08:511,24,0	0/0:15,0:15:42.14:0,42,1109	0/0:24,0:24:72.25:0,72,2025	1/1:0,20:20:54.14:1106,54,0	1/1:1,34:35:81.28:1726,81,0	1/1:0,15:15:42.14:895,42,0	1/1:5,28:33:81.28:1695,81,0	1/1:3,18:21:42.14:895,42,0	1/1:1,26:27:78.27:1662,78,0	1/1:1,18:19:39.13:831,39,0	1/1:2,18:20:51.18:1086,51,0	1/1:3,20:23:51.17:1087,51,0	1/1:4,18:22:54.19:1150,54,0	0/0:31,0:31:93.32:0,93,2896	1/1:1,21:22:57.20:1214,57,0	1/1:2,7:9:12.04:254,12,0	1/1:1,3:4:9.03:192,9,0	1/1:2,14:16:42.14:894,42,0	1/1:2,21:23:63.22:1309,63,0	1/1:3,9:12:15.05:319,15,0	1/1:1,24:25:57.20:1214,57,0	1/1:0,20:20:47.59:1022,48,0	1/1:1,14:15:24.08:487,24,0	1/1:0,22:22:63.22:1342,63,0	1/1:1,29:30:84.27:1720,84,0	1/1:2,33:35:81.28:1726,81,0	1/1:0,8:8:18.06:384,18,0
chr10	32505944	.	TA	T	5132.28	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=8.422;DP=571;FS=0.738;HRun=4;HaplotypeScore=67.9423;InbreedingCoeff=0.9976;MQ=76.44;MQ0=0;MQRankSum=-1.177;QD=34.68;ReadPosRankSum=-0.445;VQSLOD=5.1001;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,11:11:30.09:360,30,0	0/0:7,0:7:21.07:0,21,294	0/0:13,0:13:33.92:0,34,400	0/0:10,0:10:21.07:0,21,294	0/0:32,0:32:93.22:0,93,1258	0/0:21,0:21:54.16:0,54,723	0/0:14,0:14:42.14:0,42,585	1/1:2,34:36:99:1212,102,0	0/0:17,0:17:48.16:0,48,672	0/0:29,0:29:81.25:0,81,1105	0/0:29,0:29:78.26:0,78,1091	0/0:15,0:15:39.09:0,39,523	0/0:24,0:24:72.20:0,72,970	0/0:24,0:24:69.21:0,69,917	0/0:26,0:26:75.24:0,75,1034	0/0:15,0:15:42.14:0,42,588	0/0:11,0:11:30.10:0,30,420	0/0:16,0:16:48.16:0,48,671	1/1:0,13:13:39.12:468,39,0	1/1:1,33:34:99:1187,99,0	1/1:0,15:15:45.14:538,45,0	0/0:22,0:22:63.20:0,63,867	0/0:19,0:19:57.19:0,57,797	0/0:9,0:9:24.04:0,24,312	0/0:28,0:28:84.28:0,84,1172	0/0:31,0:31:87.29:0,87,1212	1/1:0,39:39:99:1367,114,0	0/0:11,0:11:33.11:0,33,462
chr10	32506087	.	TA	T	19040.36	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=6.450;DP=586;FS=4.914;HRun=2;HaplotypeScore=87.3015;InbreedingCoeff=0.9871;MQ=86.66;MQ0=0;MQRankSum=-8.186;QD=36.48;ReadPosRankSum=3.214;VQSLOD=5.4812;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,19:20:51.17:661,51,0	1/1:0,9:9:27.09:350,27,0	0/0:23,0:23:63.20:0,63,922	0/0:16,0:16:31.92:0,32,455	1/1:0,18:18:51.17:662,51,0	1/1:0,18:18:45.15:584,45,0	1/1:1,11:12:33.11:428,33,0	1/1:1,32:33:96.31:1247,96,0	1/1:1,16:17:48.16:623,48,0	1/1:0,32:32:93.27:1178,93,0	1/1:0,33:33:87.28:1129,87,0	1/1:0,19:19:54.17:690,54,0	1/1:0,26:26:78.25:1013,78,0	1/1:0,19:19:54.18:701,54,0	0/0:25,0:25:75.25:0,75,1124	1/1:0,16:16:45.15:584,45,0	1/1:0,13:13:39.13:506,39,0	1/1:0,7:7:21.07:273,21,0	1/1:0,15:15:45.15:584,45,0	1/1:0,32:32:93.30:1207,93,0	1/1:0,28:28:78.25:1013,78,0	1/1:0,28:28:81.26:1052,81,0	1/1:1,27:28:72.10:935,72,0	1/1:0,16:16:48.16:623,48,0	1/1:2,21:23:60.19:779,60,0	1/1:0,29:29:87.28:1129,87,0	1/1:0,26:26:72.23:934,72,0	1/1:0,5:5:12.04:156,12,0
chr10	32507118	.	A	ATGTCTGTC	16195.08	PASS	AB=0.923;AC=38;AF=0.679;AN=56;BaseQRankSum=3.646;DP=654;FS=2.737;HRun=0;HaplotypeScore=222.6041;InbreedingCoeff=0.7535;MQ=70.91;MQ0=2;MQRankSum=-12.179;QD=37.14;ReadPosRankSum=-2.712;VQSLOD=3.7767;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:57.16:0,57,1301	1/1:2,3:6:9.03:369,9,0	0/0:30,0:28:9.03:0,9,180	0/0:28,0:26:17.03:0,17,346	1/1:12,8:21:11.88:417,12,0	1/1:19,16:39:45.14:1736,45,0	1/1:14,4:19:12.04:464,12,0	0/1:25,0:25:31.50:31,0,293	1/1:6,12:20:42.14:1719,42,0	1/1:21,11:32:42.13:1427,42,0	1/1:21,4:25:5.90:246,6,0	1/1:12,3:17:15.05:490,15,0	1/1:16,4:21:12.04:492,12,0	1/1:12,9:23:39.13:1594,39,0	0/0:18,0:18:39.12:0,39,907	1/1:14,12:27:42.14:1721,42,0	1/1:15,2:17:23.59:655,24,0	0/1:9,2:11:31.08:428,0,31	0/0:22,0:21:24.05:0,24,633	0/0:22,0:23:48.16:0,48,1179	0/0:35,0:35:69.24:0,69,1615	1/1:7,6:14:17.95:635,18,0	1/1:10,4:17:15.02:413,15,0	1/1:10,4:16:3.48:124,3,0	1/1:34,0:38:14.94:514,15,0	1/1:20,13:34:54.19:2147,54,0	0/0:26,0:26:57.20:0,57,1375	1/1:6,7:14:15.05:573,15,0
chr10	32507491	.	T	TA	10144.55	PASS	AB=0.538;AC=37;AF=0.661;AN=56;BaseQRankSum=-3.961;DP=525;FS=4.191;HRun=6;HaplotypeScore=68.7124;InbreedingCoeff=0.8890;MQ=76.35;MQ0=0;MQRankSum=-2.638;QD=31.21;ReadPosRankSum=4.130;VQSLOD=5.4409;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:69.15:0,69,703	1/1:0,7:7:18.06:226,18,0	0/0:17,0:17:4.58:0,5,302	0/0:9,0:9:20.53:0,21,190	1/1:3,23:26:63.20:793,63,0	1/1:1,21:22:51.16:642,51,0	1/1:1,8:9:18.06:226,18,0	0/0:45,1:46:85.49:0,85,1158	1/1:0,21:21:60.19:755,60,0	1/1:0,20:20:60.19:755,60,0	1/1:3,21:24:60.19:752,60,0	1/1:0,13:13:33.11:415,33,0	1/1:0,18:18:51.16:642,51,0	1/1:3,12:15:18.23:363,18,0	0/0:24,0:24:69.14:0,69,697	1/1:1,14:15:32.78:415,33,0	1/1:2,18:20:51.16:639,51,0	1/1:0,6:6:18.06:226,18,0	0/0:14,0:14:30.06:0,30,306	0/0:23,0:23:63.12:0,63,633	0/0:14,0:14:36.08:0,36,367	1/1:2,10:12:27.09:340,27,0	1/1:3,24:27:72.23:902,72,0	1/1:2,4:6:9.03:113,9,0	1/1:1,23:24:54.17:679,54,0	1/1:3,30:32:90.24:1090,90,0	0/0:27,0:27:78.15:0,78,783	0/1:1,6:7:12.35:171,0,12
chr10	32508383	.	AACACAC	A	8110.37	PASS	AB=0.926;AC=37;AF=0.661;AN=56;BaseQRankSum=-1.525;DP=584;FS=2.723;HRun=0;HaplotypeScore=159.1269;InbreedingCoeff=0.8652;MQ=53.42;MQ0=9;MQRankSum=-4.673;QD=21.18;ReadPosRankSum=1.842;VQSLOD=4.6575;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:31:33.10:0,33,680	0/0:7,0:11:13.38:0,13,82	0/0:24,0:11:2.84:0,3,14	0/1:23,0:10:2.85:3,0,33	1/1:10,10:22:33.31:396,33,0	1/1:17,8:28:45.02:685,45,0	1/1:13,7:20:23.02:292,23,0	0/0:30,0:29:38.16:0,38,760	1/1:11,8:21:41.97:623,42,0	1/1:16,5:20:33.06:602,33,0	1/1:11,11:25:20.44:457,20,0	1/1:6,12:20:47.90:678,48,0	1/1:14,9:25:39:625,39,0	1/1:9,4:13:21.92:328,22,0	0/0:16,0:18:36.10:0,36,867	1/1:17,7:24:51.02:809,51,0	1/1:11,4:16:17.60:309,18,0	1/1:8,0:8:6.02:103,6,0	0/0:14,0:15:17.49:0,17,453	0/0:17,0:20:42.04:0,42,835	0/0:23,0:28:53.89:0,54,1489	1/1:11,4:15:17.98:255,18,0	1/1:24,5:30:19.84:437,20,0	1/1:12,2:14:18.43:214,18,0	1/1:17,12:30:57.64:833,58,0	1/1:10,4:13:12.86:401,13,0	0/0:15,0:19:42.13:0,42,949	1/1:8,1:9:3:62,3,0
chr10	32508419	.	CAT	C	1718.95	PASS	AB=0.874;AC=9;AF=0.161;AN=56;BaseQRankSum=-5.525;DP=593;FS=8.799;HRun=0;HaplotypeScore=182.9745;InbreedingCoeff=0.5884;MQ=57.96;MQ0=9;MQRankSum=4.186;QD=10.48;ReadPosRankSum=-3.463;VQSLOD=2.1123;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:32,3:33:19.99:294,20,0	0/0:8,0:8:18.92:0,19,120	0/0:20,0:15:45.01:0,45,436	0/0:17,0:8:21.02:0,21,224	0/0:30,0:30:71.30:0,71,518	0/0:28,0:28:53.74:0,54,374	0/0:14,0:14:27.10:0,27,170	1/1:27,10:36:48.20:671,48,0	0/0:18,0:18:31.52:0,32,184	0/0:27,0:26:45.22:0,45,387	0/0:27,0:27:66.46:0,66,449	0/0:21,0:21:46.21:0,46,278	0/0:24,0:24:47.91:0,48,296	0/0:14,0:14:26.41:0,26,191	0/0:21,0:20:37.25:0,37,664	0/0:22,0:22:56.13:0,56,344	0/0:19,0:19:32.51:0,33,203	0/0:10,1:11:10.39:0,10,151	0/1:14,2:14:28.19:208,0,28	1/1:18,5:23:25.80:280,26,0	0/1:26,4:30:45.82:224,0,46	0/0:16,0:16:38.89:0,39,287	0/0:24,0:24:44.15:0,44,329	0/0:18,0:18:29.13:0,29,228	0/0:27,0:27:60.74:0,61,383	0/0:16,0:15:26.68:0,27,213	0/1:19,4:23:27.66:200,0,28	0/0:6,0:6:16.70:0,17,113
chr10	32508448	.	T	TA	19124.80	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=4.482;DP=605;FS=4.907;HRun=3;HaplotypeScore=118.6816;InbreedingCoeff=0.9748;MQ=77.63;MQ0=1;MQRankSum=-8.345;QD=35.22;ReadPosRankSum=2.624;VQSLOD=4.2490;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,20:21:48.07:628,48,0	1/1:3,7:10:18.06:252,18,0	0/0:25,0:24:66.18:0,66,771	0/0:11,0:11:29.57:0,30,325	1/1:2,39:41:99:1552,114,0	1/1:1,22:23:63.17:860,63,0	1/1:2,4:6:9.03:126,9,0	1/1:5,34:39:99:1386,99,0	1/1:2,20:22:57:690,57,0	1/1:3,29:32:90.30:1247,90,0	1/1:1,30:31:81.14:1068,81,0	1/1:5,21:26:63.14:840,63,0	1/1:3,23:26:63.21:882,63,0	1/1:0,15:15:45.15:630,45,0	0/0:26,0:25:72.22:0,72,864	1/1:2,23:25:60.20:840,60,0	1/1:2,15:17:42.14:588,42,0	1/1:0,10:10:27.09:378,27,0	1/1:2,17:19:51.17:713,51,0	1/1:2,31:33:78.13:1026,78,0	1/1:1,21:22:60.20:840,60,0	1/1:0,17:17:48.16:672,48,0	1/1:1,23:24:66.22:924,66,0	1/1:0,18:18:45.11:608,45,0	1/1:1,14:15:39.13:546,39,0	1/1:1,17:18:51.16:697,51,0	1/1:3,20:23:60.20:839,60,0	1/1:0,10:10:21.07:294,21,0
chr10	32510514	.	G	GTTT	6227.65	PASS	AB=0.981;AC=41;AF=0.732;AN=56;BaseQRankSum=6.143;DP=566;FS=0.393;HRun=4;HaplotypeScore=131.1877;InbreedingCoeff=0.5103;MQ=79.15;MQ0=0;MQRankSum=-2.447;QD=13.57;ReadPosRankSum=-3.569;VQSLOD=0.1396;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:24.52:0,25,309	1/1:0,1:12:26.95:288,27,0	0/0:20,0:20:3.28:0,3,308	0/0:10,0:10:23.44:0,23,312	1/1:5,0:26:58.35:538,58,0	1/1:3,0:22:33.02:343,33,0	1/1:2,0:8:20.99:209,21,0	0/1:25,0:27:7.67:8,0,256	1/1:5,0:14:11.54:127,12,0	1/1:3,1:21:48.29:517,48,0	1/1:1,2:33:83.98:928,84,0	1/1:0,1:12:9.03:130,9,0	1/1:3,1:17:31.89:313,32,0	1/1:7,1:29:12.06:313,12,0	0/0:25,0:25:66.20:0,66,990	1/1:4,1:22:39.02:444,39,0	1/1:4,1:16:23.93:257,24,0	1/1:3,0:18:23.93:215,24,0	0/1:16,0:16:8.43:8,0,174	0/0:28,0:30:47.36:0,47,427	0/1:21,0:21:37.99:38,0,206	1/1:3,0:19:42.06:402,42,0	0/1:23,0:23:6.51:79,0,7	1/1:6,0:20:29.79:264,30,0	1/1:2,1:25:41.99:452,42,0	1/1:5,0:19:34.31:309,34,0	0/1:35,0:36:28.25:28,0,444	1/1:0,0:2:2.94:18,3,0
chr10	32510518	.	TG	T	5051.49	PASS	AB=0.959;AC=47;AF=0.839;AN=56;BaseQRankSum=4.996;DP=553;FS=1.305;HRun=1;HaplotypeScore=102.8652;InbreedingCoeff=0.3237;MQ=71.24;MQ0=0;MQRankSum=-2.420;QD=9.71;ReadPosRankSum=-4.957;VQSLOD=0.6570;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:19,2:21:23.86:87,0,24	1/1:12,0:12:24.55:154,25,0	0/1:10,0:10:4.11:4,0,273	0/0:8,0:8:23.91:0,24,292	1/1:27,0:27:65.85:424,66,0	1/1:16,0:16:32.29:196,32,0	1/1:8,0:8:20.52:136,21,0	1/1:28,2:30:13.93:343,14,0	1/1:15,0:15:15.64:97,16,0	1/1:22,0:22:54.01:362,54,0	1/1:33,0:33:78.87:449,79,0	1/1:11,0:11:8.90:59,9,0	1/1:17,0:17:26.38:134,26,0	1/1:29,0:29:27.40:181,27,0	0/0:25,0:25:75.21:0,75,970	1/1:22,0:22:38.64:249,39,0	1/1:15,0:15:22.84:125,23,0	1/1:18,0:17:16.69:85,17,0	1/1:16,1:17:1.89:169,2,0	0/1:27,2:29:25:140,0,25	0/1:21,0:21:9.02:152,0,9	1/1:21,0:21:52.68:359,53,0	1/1:27,0:27:9.73:107,10,0	1/1:21,0:21:40.64:277,41,0	1/1:22,0:22:41.12:264,41,0	1/1:19,0:19:45.26:302,45,0	0/1:33,2:35:41.28:178,0,41	1/1:2,0:2:2.96:19,3,0
chr10	32510519	.	G	GTT	7742	PASS	AB=0.776;AC=38;AF=0.679;AN=56;BaseQRankSum=-2.824;DP=549;FS=3.621;HRun=7;HaplotypeScore=102.0672;InbreedingCoeff=0.7803;MQ=70.52;MQ0=0;MQRankSum=-1.206;QD=20.01;ReadPosRankSum=-3.311;VQSLOD=2.7796;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:45.15:0,45,284	1/1:12,0:12:26.97:330,27,0	0/0:9,0:9:7.03:0,7,160	0/0:8,0:8:12.02:0,12,140	1/1:27,0:27:58.21:708,58,0	1/1:17,0:17:33.07:500,33,0	1/1:8,0:8:18.03:261,18,0	0/1:30,0:30:41.08:41,0,203	1/1:15,0:15:15.04:217,15,0	1/1:21,0:21:43.32:545,43,0	1/1:33,0:33:81.58:1108,82,0	1/1:12,0:12:9.02:124,9,0	1/1:17,0:17:28.38:337,28,0	1/1:29,0:29:9.13:306,9,0	0/0:24,0:24:69.18:0,69,782	1/1:22,0:22:39.08:543,39,0	1/1:15,0:15:23.83:337,24,0	1/1:17,0:16:18.49:261,18,0	0/0:16,0:16:29.22:0,29,178	0/0:29,0:29:23.58:0,24,337	0/0:22,0:22:8.80:0,9,187	1/1:20,0:20:44.99:591,45,0	0/1:5,22:27:3.99:136,0,4	1/1:21,0:21:35.91:395,36,0	1/1:22,0:22:39.06:551,39,0	1/1:20,0:20:37.53:430,38,0	0/0:33,0:33:32.54:0,33,407	1/1:2,0:2:2.97:20,3,0
chr10	32511402	.	T	TG	27335.70	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-0.927;DP=743;FS=10.489;HRun=1;HaplotypeScore=110.4288;InbreedingCoeff=0.9998;MQ=85.45;MQ0=0;MQRankSum=-8.833;QD=41.29;ReadPosRankSum=5.652;VQSLOD=3.4712;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,53:56:99:2158,144,0	1/1:1,10:11:33.11:483,33,0	0/0:31,0:31:87.17:0,87,1075	0/0:23,0:23:66.19:0,66,828	1/1:0,28:28:75.25:1124,75,0	1/1:0,15:15:45.15:674,45,0	1/1:3,25:28:72.24:1079,72,0	1/1:0,24:24:72.24:1079,72,0	1/1:1,35:36:99:1527,102,0	1/1:2,30:32:87.13:1278,87,0	1/1:0,22:22:63.21:944,63,0	1/1:1,22:23:63.21:944,63,0	1/1:1,18:19:48.16:719,48,0	1/1:1,22:23:66.22:988,66,0	0/0:27,0:27:75.24:0,75,972	1/1:1,25:26:75.25:1123,75,0	1/1:1,31:32:84.28:1259,84,0	1/1:1,15:16:39.13:584,39,0	1/1:1,26:27:78.26:1147,78,0	1/1:1,27:28:81.27:1214,81,0	1/1:2,30:32:90.30:1349,90,0	1/1:1,38:39:99:1618,108,0	1/1:0,23:23:62.91:944,63,0	1/1:0,35:35:93.27:1392,93,0	1/1:0,20:20:60.20:899,60,0	1/1:1,21:22:63.21:941,63,0	1/1:1,31:33:90.29:1327,90,0	1/1:0,12:12:36.12:539,36,0
chr10	32513435	.	C	CACACCTAAAAGCTCTAGA	51967.74	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-7.974;DP=598;FS=1.266;HRun=0;HaplotypeScore=131.6016;InbreedingCoeff=0.8163;MQ=45.62;MQ0=0;MQRankSum=-8.440;QD=97.32;ReadPosRankSum=1.076;VQSLOD=4.8403;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,1:15:8.06:529,8,0	1/1:1,4:15:15.02:1067,15,0	0/0:19,0:9:11.70:0,12,439	0/0:13,0:11:23.24:0,23,452	1/1:5,6:27:26.78:1387,27,0	1/1:2,8:23:24.08:2093,24,0	1/1:3,1:17:6.02:110,6,0	1/1:24,0:19:51.16:2174,51,0	1/1:1,10:20:33.07:2635,33,0	1/1:3,11:30:84.23:5448,84,0	1/1:2,12:28:48.12:3546,48,0	1/1:2,10:22:36.12:2740,36,0	1/1:1,13:28:39.13:3398,39,0	1/1:5,5:21:21.03:1396,21,0	0/0:32,0:32:96.33:0,96,4443	1/1:0,9:15:24.08:2093,24,0	1/1:0,3:13:9.03:784,9,0	1/1:0,1:12:6.02:503,6,0	1/1:2,2:12:33.10:1635,33,0	1/1:2,13:38:45.15:3530,45,0	1/1:3,2:8:6.02:519,6,0	1/1:1,8:34:27.09:2160,27,0	1/1:1,11:36:35.96:3117,36,0	1/1:2,2:11:9.03:569,9,0	1/1:1,5:15:15.05:1308,15,0	1/1:3,12:25:69.11:4804,69,0	1/1:1,12:34:35.32:3137,35,0	1/1:6,2:8:18.05:1285,18,0
chr10	32513438	.	A	ACCT	6731.14	PASS	AB=0.954;AC=39;AF=0.722;AN=54;BaseQRankSum=11.710;DP=435;FS=1.552;HRun=0;HaplotypeScore=184.3217;InbreedingCoeff=0.1021;MQ=49.42;MQ0=0;MQRankSum=-9.707;QD=18.44;ReadPosRankSum=8.203;VQSLOD=3.9337;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,0:7:5.60:40,6,0	1/1:13,0:13:12.04:161,12,0	0/0:20,0:10:27.07:0,27,434	0/0:14,0:12:24.74:0,25,410	0/1:16,0:16:99:167,0,133	0/1:18,0:18:15.86:283,0,16	./.	0/1:10,12:20:99:581,0,255	1/1:17,0:17:8.07:353,8,0	0/1:21,1:22:86.85:468,0,87	1/1:20,1:21:21.26:417,21,0	1/1:17,0:17:30.09:377,30,0	1/1:23,0:22:23.36:532,23,0	1/1:8,0:8:18.06:235,18,0	0/0:33,0:33:96.33:0,96,1782	1/1:14,0:13:24.08:319,24,0	1/1:9,0:9:9.02:110,9,0	1/1:7,0:7:6.02:79,6,0	0/1:11,0:11:87.95:88,0,266	0/1:25,0:25:69.96:471,0,70	1/1:4,0:4:6.02:77,6,0	1/1:22,0:22:24.08:318,24,0	1/1:25,0:25:33.50:406,34,0	1/1:5,0:5:5.25:79,5,0	0/1:12,0:12:28.92:167,0,29	0/1:16,0:16:30.53:479,0,31	1/1:23,0:23:35.83:463,36,0	0/1:6,0:6:62.46:62,0,125
chr10	32515143	.	GA	G	16324.92	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=5.066;DP=721;FS=0.572;HRun=8;HaplotypeScore=81.8739;InbreedingCoeff=0.9899;MQ=61.11;MQ0=1;MQRankSum=0.588;QD=25.08;ReadPosRankSum=3.826;VQSLOD=5.4103;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,29:29:75.12:724,75,0	1/1:0,11:11:33.05:318,33,0	0/0:31,0:23:40.29:0,40,502	0/0:14,0:13:14.04:0,14,263	1/1:3,28:31:81.13:782,81,0	1/1:1,24:25:66.11:637,66,0	1/1:2,14:16:42.06:406,42,0	1/1:8,32:40:96.12:919,96,0	1/1:1,21:22:60.10:579,60,0	1/1:2,26:28:78.11:749,78,0	1/1:2,21:23:66.10:636,66,0	1/1:3,22:25:63.10:608,63,0	1/1:4,27:31:78.12:753,78,0	1/1:1,31:32:87.14:840,87,0	0/0:25,0:25:69.21:0,69,832	1/1:0,18:18:48.08:463,48,0	1/1:0,22:22:63.10:608,63,0	1/1:4,30:34:87.13:840,87,0	1/1:1,28:28:75.12:724,75,0	1/1:1,31:32:93.15:898,93,0	1/1:5,20:25:57.09:550,57,0	1/1:3,21:24:51.07:493,51,0	1/1:3,26:29:69.11:666,69,0	1/1:0,23:23:54.09:522,54,0	1/1:1,28:29:75.12:724,75,0	1/1:0,30:30:87.14:840,87,0	1/1:2,34:36:90.14:869,90,0	1/1:0,7:7:18.03:174,18,0
chr10	32517593	.	GAATTTAATA	G	28844.22	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=6.855;DP=403;FS=9.983;HRun=0;HaplotypeScore=219.0222;InbreedingCoeff=0.8765;MQ=56.73;MQ0=0;MQRankSum=-8.306;QD=76.92;ReadPosRankSum=3.892;VQSLOD=3.8372;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,5:8:18.04:491,18,0	1/1:4,7:11:33.03:818,33,0	0/0:8,0:8:12.54:0,13,514	0/0:9,0:8:23.19:0,23,678	1/1:7,34:41:99:2674,111,0	1/1:3,9:12:36.11:940,36,0	1/1:0,6:6:18.06:566,18,0	1/1:7,12:20:59.96:1329,60,0	1/1:0,7:7:21.07:666,21,0	1/1:4,21:25:75.21:2138,75,0	1/1:2,25:26:75.25:2099,75,0	1/1:3,14:17:51.17:1416,51,0	1/1:1,8:12:30.03:801,30,0	1/1:6,10:16:47.87:1058,48,0	0/0:11,0:11:33.10:0,33,1292	1/1:5,4:9:26.79:473,27,0	1/1:1,4:5:11.99:303,12,0	1/1:1,2:3:9.03:160,9,0	1/1:2,13:15:45.08:1283,45,0	1/1:2,23:25:75.08:2102,75,0	1/1:1,3:4:9.03:283,9,0	1/1:1,7:8:24.07:622,24,0	1/1:4,10:14:41.95:971,42,0	1/1:0,1:1:3.01:95,3,0	1/1:3,21:24:72.06:2013,72,0	1/1:2,16:18:54.19:1611,54,0	1/1:7,25:32:96.17:2588,96,0	1/1:1,14:15:45.12:1345,45,0
chr10	32517605	.	ATTT	A	19878.11	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=7.418;DP=423;FS=23.436;HRun=3;HaplotypeScore=210.7999;InbreedingCoeff=0.8796;MQ=57.42;MQ0=0;MQRankSum=-7.593;QD=49.95;ReadPosRankSum=2.415;VQSLOD=2.3989;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,5:11:18.02:281,18,0	1/1:0,11:11:30.06:504,30,0	0/0:9,0:9:18.46:0,18,465	0/0:6,0:6:18.06:0,18,444	1/1:0,44:44:99:2137,120,0	1/1:0,12:12:33.11:576,33,0	1/1:0,6:6:18.06:320,18,0	1/1:0,22:22:66.23:1201,66,0	1/1:0,7:7:21.07:377,21,0	1/1:0,29:29:87.30:1552,87,0	1/1:0,29:28:72.25:1267,72,0	1/1:0,15:15:45.15:793,45,0	1/1:0,9:9:27.09:474,27,0	1/1:0,16:16:45.15:796,45,0	0/0:10,0:10:30.09:0,30,692	1/1:0,9:9:27.09:493,27,0	1/1:0,7:7:15.05:272,15,0	1/1:1,2:3:6.02:108,6,0	1/1:0,19:19:57.20:1034,57,0	1/1:0,29:29:87.22:1455,87,0	1/1:0,4:4:12.04:198,12,0	1/1:0,8:8:21.07:376,21,0	1/1:0,15:15:42.14:757,42,0	1/1:0,1:1:3.01:53,3,0	1/1:0,25:25:72.25:1260,72,0	1/1:0,20:20:60.21:1076,60,0	1/1:0,32:32:96.33:1715,96,0	1/1:0,15:15:45.15:803,45,0
chr10	32517608	.	T	TAATGGAA	10540.66	PASS	AB=0.969;AC=31;AF=0.554;AN=56;BaseQRankSum=-13.823;DP=457;FS=2.681;HRun=0;HaplotypeScore=287.7919;InbreedingCoeff=-0.2396;MQ=60.00;MQ0=0;MQRankSum=-1.071;QD=24.51;ReadPosRankSum=-12.160;VQSLOD=0.9536;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:6,6:12:8.64:125,0,9	0/1:11,0:11:11.05:181,0,11	0/0:12,0:12:33.09:0,33,654	0/0:6,0:6:18.06:0,18,473	0/1:44,0:44:5.19:1307,0,5	1/1:13,0:13:5.36:360,5,0	0/1:7,0:7:1.41:194,0,1	1/1:29,0:29:43.47:1200,43,0	0/1:9,0:9:14.62:129,0,15	0/1:31,0:31:3.82:1072,0,4	0/1:29,0:28:66.54:295,0,67	1/1:16,0:16:12.20:774,12,0	0/1:11,0:11:0.99:196,0,1	0/1:17,0:17:22.58:343,0,23	0/0:9,0:9:27.09:0,27,712	1/1:10,0:10:2.10:358,2,0	1/1:9,0:9:5.42:224,5,0	0/1:2,1:3:0.81:114,0,1	0/1:20,0:20:5.36:519,0,5	0/1:29,0:29:44.53:356,0,45	0/1:5,0:5:1.11:121,0,1	1/1:8,0:8:1.45:377,1,0	0/1:17,0:17:6.03:539,0,6	0/1:2,0:2:0.46:45,0,0	0/1:27,0:27:31.68:383,0,32	0/1:21,0:21:6.83:499,0,7	0/1:34,0:33:55.05:543,0,55	0/1:16,0:16:20.10:285,0,20
chr10	32518714	.	AT	A	6608.23	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=8.244;DP=423;FS=6.768;HRun=1;HaplotypeScore=217.5849;InbreedingCoeff=0.8332;MQ=40.39;MQ0=11;MQRankSum=-3.802;QD=16.90;ReadPosRankSum=3.666;VQSLOD=4.8509;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,20:22:58.56:656,59,0	1/1:6,1:7:20.53:136,21,0	0/0:9,0:4:5.08:0,5,73	0/0:13,0:9:18.01:0,18,238	1/1:26,3:29:37.99:366,38,0	1/1:15,1:16:35.54:239,36,0	1/1:14,0:14:26.30:168,26,0	1/1:11,12:20:43.34:408,43,0	1/1:13,0:13:27.44:154,27,0	1/1:18,1:18:35.68:249,36,0	1/1:14,1:14:31.60:184,32,0	1/1:11,1:10:9.66:92,10,0	1/1:8,1:9:25.95:164,26,0	1/1:21,1:22:56.92:349,57,0	0/0:10,0:9:24.07:0,24,310	1/1:7,2:9:11.89:128,12,0	1/1:13,2:14:19.79:162,20,0	1/1:6,1:7:7.95:54,8,0	1/1:3,9:11:27.03:313,27,0	1/1:8,12:18:40.60:478,41,0	1/1:3,6:9:20.89:196,21,0	1/1:20,0:20:47.16:299,47,0	1/1:15,1:16:43.48:245,43,0	1/1:13,0:13:15.28:115,15,0	1/1:14,2:16:37.17:238,37,0	1/1:22,2:24:60.24:365,60,0	1/1:3,24:27:72.09:832,72,0	1/1:1,0:1:2.96:19,3,0
chr10	32518718	.	AT	A	5927.50	PASS	AB=0.971;AC=48;AF=0.857;AN=56;BaseQRankSum=9.231;DP=425;FS=2.874;HRun=1;HaplotypeScore=228.1486;InbreedingCoeff=0.5884;MQ=44.16;MQ0=6;MQRankSum=-4.528;QD=15.12;ReadPosRankSum=5.879;VQSLOD=5.0338;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:22,1:22:57.90:654,58,0	1/1:7,0:7:20.12:118,20,0	0/0:8,0:4:12.03:0,12,155	0/0:14,0:11:27.01:0,27,345	1/1:30,0:30:6.58:298,7,0	1/1:15,0:15:19.37:185,19,0	1/1:16,0:16:13.23:127,13,0	1/1:17,1:17:40.50:402,40,0	1/1:13,0:13:25.88:132,26,0	1/1:18,1:19:18.01:191,18,0	1/1:14,1:15:31.56:164,32,0	1/1:12,1:12:3.68:92,4,0	1/1:10,0:10:24.84:145,25,0	1/1:22,0:22:50.77:276,51,0	0/0:11,0:10:27.09:0,27,408	1/1:9,1:10:4.36:99,4,0	0/1:15,1:15:26.44:137,0,26	0/1:7,0:7:4.73:37,0,5	1/1:11,1:11:27.03:314,27,0	1/1:18,1:18:41.77:480,42,0	1/1:6,2:8:20.89:194,21,0	1/1:20,0:20:32.16:249,32,0	1/1:16,0:16:25.37:184,25,0	1/1:14,0:14:8.92:106,9,0	1/1:17,2:19:26.49:215,26,0	1/1:24,0:24:40.75:277,41,0	1/1:22,3:25:72.08:831,72,0	1/1:1,0:1:2.96:19,3,0
chr10	32518719	.	TAAA	T	13411.83	PASS	AB=0.816;AC=48;AF=0.857;AN=56;BaseQRankSum=6.667;DP=433;FS=0.699;HRun=3;HaplotypeScore=224.1927;InbreedingCoeff=0.6117;MQ=44.02;MQ0=6;MQRankSum=-6.448;QD=33.53;ReadPosRankSum=3.215;VQSLOD=3.3121;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:23,1:23:36.34:250,36,0	1/1:0,7:7:21.07:325,21,0	0/0:8,0:4:12.02:0,12,204	0/0:14,0:11:16.90:0,17,505	1/1:7,25:32:86.73:1275,87,0	1/1:4,12:16:47.41:685,47,0	1/1:2,13:15:45.04:706,45,0	1/1:18,1:18:0.40:144,0,0	1/1:0,13:13:30.10:521,30,0	1/1:5,15:20:60.05:926,60,0	1/1:2,13:15:35.55:555,36,0	0/1:5,7:11:22.32:326,0,22	1/1:1,9:10:30.03:436,30,0	1/1:0,21:21:60.20:1037,60,0	0/0:11,0:10:27.09:0,27,620	1/1:3,6:9:27.02:375,27,0	1/1:4,12:15:41.18:609,41,0	1/1:2,5:7:17.98:263,18,0	1/1:12,1:12:26.36:151,26,0	1/1:17,1:17:1.27:179,1,0	1/1:7,1:8:19.47:145,19,0	1/1:2,18:20:59.92:917,60,0	1/1:1,15:16:44.64:730,45,0	1/1:5,9:14:32.90:495,33,0	1/1:6,13:19:56.88:827,57,0	1/1:5,22:27:78.07:1197,78,0	1/1:24,1:25:37.84:291,38,0	0/1:4,0:4:6.85:45,0,7
chr10	32518736	.	TA	T	13063.48	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=7.433;DP=388;FS=13.418;HRun=1;HaplotypeScore=190.5335;InbreedingCoeff=0.8639;MQ=59.77;MQ0=1;MQRankSum=-7.803;QD=36.90;ReadPosRankSum=3.344;VQSLOD=2.1990;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,23:22:51.07:661,51,0	1/1:0,8:8:21.07:291,21,0	0/0:7,0:6:18.06:0,18,272	0/0:16,0:14:0.30:0,0,419	1/1:0,30:30:87.28:1205,87,0	1/1:0,15:15:42.14:579,42,0	1/1:0,15:15:39.13:539,39,0	1/1:3,9:12:32.84:416,33,0	1/1:2,7:9:26.91:332,27,0	1/1:0,16:17:51:666,51,0	1/1:0,14:14:39.13:539,39,0	1/1:1,8:9:12.43:318,12,0	1/1:0,9:9:27.09:375,27,0	1/1:0,15:15:45.15:623,45,0	0/0:11,0:11:30.10:0,30,477	1/1:0,7:7:21.07:291,21,0	1/1:0,12:12:27.09:374,27,0	1/1:0,7:7:21.07:292,21,0	1/1:0,14:14:41.98:491,42,0	1/1:1,18:19:57.08:728,57,0	1/1:0,12:12:29.91:328,30,0	1/1:0,18:18:51.13:679,51,0	1/1:0,12:12:33.11:457,33,0	1/1:0,12:12:33.11:456,33,0	1/1:0,20:20:51.17:707,51,0	1/1:0,21:21:60.16:809,60,0	1/1:0,20:20:57.19:781,57,0	1/1:0,4:4:9.03:125,9,0
chr10	32520815	.	C	CT	12228.19	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-0.211;DP=599;FS=8.208;HRun=7;HaplotypeScore=113.8499;InbreedingCoeff=0.9530;MQ=75.46;MQ0=0;MQRankSum=-1.635;QD=30.88;ReadPosRankSum=1.842;VQSLOD=3.6100;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:30.25:0,30,204	1/1:1,13:14:39.07:451,39,0	0/0:11,0:11:11.97:0,12,112	0/0:13,0:14:19.01:0,19,260	1/1:1,32:33:90.16:1026,90,0	1/1:3,20:23:60.18:720,60,0	1/1:0,14:14:39.12:468,39,0	0/0:39,0:39:1.23:0,1,183	1/1:2,19:21:57.17:684,57,0	1/1:4,24:28:72.19:848,72,0	1/1:1,26:27:78.13:901,78,0	1/1:4,14:19:45.02:493,45,0	1/1:2,17:19:45.14:540,45,0	1/1:0,15:16:45.09:520,45,0	0/0:25,0:25:72.11:0,72,692	1/1:1,21:22:63.16:738,63,0	1/1:2,15:17:39.12:468,39,0	1/1:2,8:10:24.07:286,24,0	0/0:18,0:18:12.53:0,13,101	0/0:24,0:24:49.82:0,50,193	0/0:19,0:19:24.46:0,24,133	1/1:4,13:17:39.12:468,39,0	1/1:2,23:25:63.19:755,63,0	1/1:0,14:14:39.12:468,39,0	1/1:3,21:24:60.14:703,60,0	1/1:1,32:33:93.29:1114,93,0	0/0:28,0:27:33.55:0,34,222	1/1:4,16:20:48.15:576,48,0
chr10	32521130	.	G	GA	24309.57	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-12.935;DP=811;FS=7.780;HRun=5;HaplotypeScore=69.2221;InbreedingCoeff=0.9878;MQ=84.97;MQ0=0;MQRankSum=-9.597;QD=33.95;ReadPosRankSum=5.166;VQSLOD=4.9376;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,26:28:72.23:947,72,0	1/1:1,15:16:39.13:513,39,0	0/0:22,0:22:60.14:0,60,635	0/0:31,0:31:75.11:0,75,770	1/1:2,34:36:99:1283,102,0	1/1:2,21:23:57.19:750,57,0	1/1:3,23:26:66.21:869,66,0	1/1:6,25:31:72.20:916,72,0	1/1:2,31:33:87.28:1145,87,0	1/1:2,30:33:96.31:1259,96,0	1/1:2,29:31:81.26:1066,81,0	1/1:3,28:31:84.27:1105,84,0	1/1:4,34:38:99:1363,105,0	1/1:1,35:36:99:1300,99,0	0/0:42,0:42:99:0,117,1241	1/1:7,17:24:48.16:632,48,0	1/1:0,27:27:75.20:967,75,0	1/1:4,5:9:12.04:158,12,0	1/1:3,15:18:25.51:569,26,0	1/1:4,35:39:99:1282,99,0	1/1:3,27:30:81.22:1037,81,0	1/1:0,27:27:72.19:928,72,0	1/1:1,30:32:87.01:1134,87,0	1/1:0,44:44:99:1540,117,0	1/1:3,19:22:54.18:711,54,0	1/1:2,31:33:93.26:1178,93,0	1/1:0,41:41:99:1342,102,0	1/1:0,8:8:24.08:316,24,0
chr10	32521506	.	G	GTC	27303.59	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=1.936;DP=671;FS=4.649;HRun=0;HaplotypeScore=110.5663;InbreedingCoeff=0.9935;MQ=82.39;MQ0=3;MQRankSum=-7.743;QD=45.43;ReadPosRankSum=3.827;VQSLOD=5.8406;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,23:25:57.19:1019,57,0	1/1:0,9:10:27.09:492,27,0	0/0:26,0:26:49.51:0,50,747	0/0:21,0:21:57.14:0,57,770	1/1:0,33:33:93.32:1704,93,0	1/1:2,25:26:66.23:1209,66,0	1/1:0,8:8:15.05:275,15,0	1/1:7,36:46:99:1894,120,0	1/1:0,25:25:54.19:989,54,0	1/1:1,29:30:87.29:1518,87,0	1/1:1,26:28:72.21:1319,72,0	1/1:1,19:20:51.17:935,51,0	1/1:1,13:14:27.09:495,27,0	1/1:0,15:15:33.11:605,33,0	0/0:23,0:22:69.23:0,69,987	1/1:0,21:21:54.19:990,54,0	1/1:1,22:23:54.19:989,54,0	1/1:1,15:16:42.14:769,42,0	1/1:4,16:20:54.16:943,54,0	1/1:5,34:38:93.32:1702,93,0	1/1:1,18:20:48.16:856,48,0	1/1:0,24:24:72.25:1299,72,0	1/1:0,32:32:90.31:1649,90,0	1/1:0,22:22:51.17:935,51,0	1/1:1,25:26:60.21:1100,60,0	1/1:1,27:28:81.28:1479,81,0	1/1:0,29:29:81.28:1479,81,0	1/1:1,17:18:36.12:659,36,0
chr10	32522117	.	CCACACACACA	C	1237.80	PASS	AB=0.917;AC=11;AF=0.196;AN=56;BaseQRankSum=-2.371;DP=533;FS=22.975;HRun=0;HaplotypeScore=181.0767;InbreedingCoeff=0.8129;MQ=55.44;MQ0=19;MQRankSum=0.472;QD=13.03;ReadPosRankSum=1.083;VQSLOD=1.3781;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:12,0:9:15.03:384,15,0	0/0:10,0:10:18.53:0,19,587	0/0:31,0:17:9.03:0,9,192	0/0:20,0:10:5.95:0,6,147	0/0:27,0:27:44.73:0,45,1489	0/0:24,0:24:33.11:0,33,1212	0/0:17,0:16:12.51:0,13,407	1/1:13,7:18:18.06:262,18,0	0/0:21,0:21:25.90:0,26,718	0/0:21,0:21:39.09:0,39,1154	0/0:23,0:23:30.07:0,30,972	0/0:15,0:15:14.24:0,14,533	0/0:13,0:13:24.54:0,25,702	0/0:8,0:8:9.50:0,10,274	0/0:17,0:17:30.07:0,30,944	0/0:14,0:14:24.55:0,25,885	0/0:23,0:22:37.54:0,38,1055	0/0:10,0:9:14.54:0,15,447	0/1:10,1:11:0.92:373,0,1	1/1:11,14:26:8.24:181,8,0	1/1:13,0:11:11.97:153,12,0	0/0:24,0:24:30.06:0,30,1012	0/0:26,0:26:17.87:0,18,639	0/0:32,0:30:38.69:0,39,1310	0/0:19,0:19:30.10:0,30,1260	0/0:27,0:27:59.77:0,60,1816	1/1:4,7:11:3.01:46,3,0	0/0:14,0:10:29.31:0,29,860
chr10	32522150	.	CAGAGAGAGAG	C	2376.38	PASS	AB=0.837;AC=23;AF=0.442;AN=52;BaseQRankSum=3.320;DP=493;FS=62.681;HRun=0;HaplotypeScore=189.7385;InbreedingCoeff=0.0569;MQ=41.61;MQ0=19;MQRankSum=-1.396;QD=7.97;ReadPosRankSum=1.209;VQSLOD=0.3795;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:12:15.05:0,15,613	0/1:11,0:12:15.74:188,0,16	./.	./.	0/1:22,8:32:44.68:45,0,90	0/0:15,4:21:3:0,3,28	1/1:12,4:15:2.96:82,3,0	0/0:24,0:23:14.96:0,15,349	1/1:15,3:19:1.01:79,1,0	0/1:17,1:22:84.97:344,0,85	0/0:16,0:19:4.49:0,4,22	1/1:14,2:17:5.65:95,6,0	1/1:8,4:14:14.97:378,15,0	1/1:3,6:10:3:25,3,0	0/0:17,0:17:27.09:0,27,1122	0/1:7,3:13:10.41:30,0,10	0/1:17,1:16:10.29:216,0,10	0/1:9,0:8:37.61:178,0,38	0/0:18,0:17:33.11:0,33,1164	0/0:22,0:21:6.02:0,6,237	0/0:13,0:11:9.86:0,10,390	1/1:18,5:24:3.01:54,3,0	0/1:14,4:21:12.21:20,0,12	0/0:22,0:20:2.56:0,3,18	0/1:22,0:23:10.04:10,0,268	1/1:25,4:29:2.90:563,3,0	0/0:15,0:14:12.04:0,12,413	0/1:10,2:11:30.65:227,0,31
chr10	32522221	.	G	GT	8948.32	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=15.882;DP=499;FS=8.466;HRun=5;HaplotypeScore=198.8502;InbreedingCoeff=0.9950;MQ=87.69;MQ0=0;MQRankSum=-14.418;QD=30.44;ReadPosRankSum=1.840;VQSLOD=2.1557;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:42.10:0,42,450	1/1:0,9:9:27.08:327,27,0	0/0:25,0:24:66.11:0,66,676	0/0:29,0:27:58.07:0,58,694	1/1:1,23:24:41.02:546,41,0	1/1:4,17:21:51.16:614,51,0	1/1:1,12:13:33.10:403,33,0	0/0:30,0:29:78.19:0,78,838	1/1:3,9:12:27.08:319,27,0	1/1:1,13:14:39.12:488,39,0	1/1:1,20:21:60.17:684,60,0	1/1:3,10:13:30.06:319,30,0	1/1:2,11:13:33.10:401,33,0	1/1:2,15:17:42.12:496,42,0	0/0:17,0:17:48.10:0,48,507	1/1:3,11:14:33.57:394,34,0	1/1:3,12:15:36.11:435,36,0	1/1:1,6:7:18.06:222,18,0	0/0:22,0:22:60.14:0,60,634	0/0:30,0:30:84.21:0,84,902	0/0:14,0:14:39.07:0,39,409	1/1:1,22:23:66.19:775,66,0	1/1:1,19:20:57.17:669,57,0	1/1:1,6:7:15.04:166,15,0	1/1:0,19:19:57.17:678,57,0	1/1:4,21:25:62.30:754,62,0	0/0:22,0:22:60.15:0,60,643	1/1:0,7:7:21.07:258,21,0
chr10	32522227	.	C	CAGTTAT	23209.41	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=11.898;DP=529;FS=2.041;HRun=0;HaplotypeScore=198.1399;InbreedingCoeff=0.9903;MQ=88.44;MQ0=0;MQRankSum=-14.422;QD=72.76;ReadPosRankSum=3.006;VQSLOD=5.5848;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:42.13:0,42,877	1/1:2,7:9:21.07:693,21,0	0/0:24,0:24:53.84:0,54,1069	0/0:30,0:30:79.79:0,80,1618	1/1:8,17:25:51.18:1632,51,0	1/1:10,13:23:54.18:1598,54,0	1/1:10,6:16:30.10:815,30,0	0/0:33,0:31:69.18:0,69,1343	1/1:8,8:16:42.14:1221,42,0	1/1:11,8:19:39.13:1260,39,0	1/1:4,19:23:63.20:1991,63,0	1/1:5,6:12:27.08:800,27,0	1/1:6,8:14:30.08:903,30,0	1/1:5,10:15:33.11:1079,33,0	0/0:17,0:17:51.18:0,51,1111	1/1:4,10:14:33.11:1090,33,0	1/1:3,9:12:30.10:988,30,0	1/1:2,4:6:12.04:398,12,0	0/0:23,0:23:63.18:0,63,1291	0/0:29,0:29:81.28:0,81,1792	0/0:17,0:17:42.14:0,42,923	1/1:8,19:27:66.21:1986,66,0	1/1:12,15:27:57.20:1833,57,0	1/1:2,5:7:18.06:527,18,0	1/1:5,16:21:54.18:1707,54,0	1/1:7,19:26:69.24:2189,69,0	0/0:21,0:21:57.20:0,57,1280	1/1:2,5:7:15.05:498,15,0
chr10	32522324	.	TA	T	5213.02	PASS	AB=1.000;AC=49;AF=0.875;AN=56;BaseQRankSum=7.770;DP=486;FS=12.208;HRun=1;HaplotypeScore=111.6298;InbreedingCoeff=0.7271;MQ=93.34;MQ0=0;MQRankSum=-9.662;QD=12.50;ReadPosRankSum=6.875;VQSLOD=2.1463;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:23:9.57:244,10,0	1/1:10,0:10:24.97:116,25,0	0/0:30,0:30:87.26:0,87,1318	0/0:21,0:21:57.19:0,57,880	1/1:19,1:20:54.10:311,54,0	1/1:27,0:27:25.03:307,25,0	1/1:17,1:18:39.93:226,40,0	1/1:21,0:21:38.53:284,39,0	1/1:8,1:9:4.48:112,4,0	1/1:24,1:25:35.37:290,35,0	1/1:17,1:18:5.73:184,6,0	1/1:21,0:21:34.84:291,35,0	1/1:13,1:14:2.34:85,2,0	1/1:12,0:12:31.34:172,31,0	0/0:18,0:18:54.18:0,54,862	1/1:18,0:18:17.47:179,17,0	1/1:17,0:17:48.30:253,48,0	1/1:8,0:8:19.45:91,19,0	1/1:15,0:15:44.05:278,44,0	1/1:20,0:20:40.94:261,41,0	0/1:9,0:9:6.63:65,0,7	1/1:13,1:14:36.27:192,36,0	1/1:21,0:21:50.68:265,51,0	1/1:11,0:11:28.12:141,28,0	1/1:20,0:20:37.70:258,38,0	1/1:22,0:22:35.93:292,36,0	1/1:19,0:19:40.80:246,41,0	1/1:5,0:5:14.14:71,14,0
chr10	32522325	.	AC	A	13173.46	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=5.537;DP=489;FS=7.686;HRun=3;HaplotypeScore=85.1712;InbreedingCoeff=0.9852;MQ=93.10;MQ0=0;MQRankSum=-10.369;QD=31.37;ReadPosRankSum=5.165;VQSLOD=4.6996;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,20:23:44.81:543,45,0	1/1:0,10:10:27.08:335,27,0	0/0:30,0:30:84.28:0,84,1181	0/0:21,0:21:57.15:0,57,767	1/1:1,19:20:57.18:704,57,0	1/1:1,25:26:72.23:890,72,0	1/1:1,17:18:42.13:520,42,0	1/1:1,20:21:60.19:743,60,0	1/1:3,6:9:24.05:282,24,0	1/1:2,23:25:69.22:852,69,0	1/1:3,16:19:39.12:480,39,0	1/1:1,20:21:60.19:743,60,0	1/1:2,12:14:24.08:297,24,0	1/1:0,12:12:33.10:409,33,0	0/0:18,0:18:54.18:0,54,777	1/1:2,16:18:42.13:520,42,0	1/1:0,17:17:51.16:632,51,0	1/1:0,8:8:21.07:260,21,0	1/1:0,15:15:45.14:557,45,0	1/1:2,18:20:42.13:519,42,0	1/1:2,7:9:15.01:186,15,0	1/1:1,13:14:39.12:482,39,0	1/1:1,21:22:54.17:669,54,0	1/1:0,11:11:30.09:372,30,0	1/1:3,19:22:60.18:732,60,0	1/1:0,22:22:60.19:742,60,0	1/1:0,19:19:42.13:520,42,0	1/1:0,5:5:15.05:186,15,0
chr10	32522349	.	AT	A	3121.43	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=5.329;DP=539;FS=0.000;HRun=6;HaplotypeScore=107.4348;InbreedingCoeff=0.9976;MQ=86.96;MQ0=0;MQRankSum=-8.217;QD=24.20;ReadPosRankSum=-1.929;VQSLOD=1.8830;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,21:25:54.13:580,54,0	0/0:8,0:8:21.07:0,21,276	0/0:21,0:21:48.25:0,48,609	0/0:22,0:23:41.46:0,41,499	0/0:28,0:28:78.22:0,78,1005	0/0:27,0:27:72.19:0,72,928	0/0:16,0:16:33.06:0,33,402	1/1:6,20:26:60.13:635,60,0	0/0:16,0:16:45.12:0,45,562	0/0:28,0:28:84.24:0,84,1076	0/0:17,0:17:51.12:0,51,652	0/0:22,0:22:66.17:0,66,845	0/0:13,0:13:27.09:0,27,355	0/0:13,0:13:36.02:0,36,420	0/0:17,0:17:48.14:0,48,617	0/0:11,0:11:30.05:0,30,375	0/0:14,0:14:42.14:0,42,551	0/0:15,0:15:42.11:0,42,534	1/1:2,18:20:54.13:580,54,0	1/1:2,20:22:57.14:612,57,0	1/1:2,8:10:21.05:225,21,0	0/0:20,0:20:57.14:0,57,730	0/0:29,0:29:81.73:0,82,1064	0/0:11,0:11:30.10:0,30,395	0/0:25,0:25:72.20:0,72,918	0/0:26,1:27:40:0,40,871	1/1:2,24:26:63.16:677,63,0	0/0:9,0:9:27.09:0,27,348
chr10	32523136	.	TTTTA	T	4192.95	PASS	AB=0.988;AC=34;AF=0.607;AN=56;BaseQRankSum=8.909;DP=609;FS=0.340;HRun=0;HaplotypeScore=166.3838;InbreedingCoeff=0.6244;MQ=68.67;MQ0=4;MQRankSum=1.764;QD=10.28;ReadPosRankSum=11.392;VQSLOD=1.3631;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:13:40.94:0,41,571	0/1:10,0:10:34.25:56,0,34	0/0:25,0:18:37.34:0,37,493	0/0:18,0:13:7.78:0,8,285	1/1:35,1:36:14.80:365,15,0	1/1:31,0:31:63.45:331,63,0	0/1:18,1:19:27.47:172,0,27	0/0:30,0:29:70.41:0,70,863	0/1:21,0:21:11.41:138,0,11	1/1:21,1:22:16.21:309,16,0	1/1:20,0:20:1.02:192,1,0	1/1:15,0:15:9.74:140,10,0	1/1:22,0:22:42.85:240,43,0	1/1:21,0:21:21.94:190,22,0	0/0:24,0:24:70.45:0,70,1375	1/1:28,1:29:3.31:243,3,0	1/1:31,0:31:38.81:276,39,0	1/1:11,0:11:20.09:106,20,0	0/0:23,0:23:66.19:0,66,918	0/0:29,0:29:60.10:0,60,862	0/0:6,0:6:13.21:0,13,147	1/1:29,0:29:45.30:320,45,0	1/1:18,0:18:22.94:130,23,0	1/1:14,0:14:22.96:121,23,0	1/1:16,2:18:18.21:247,18,0	1/1:29,2:30:56.47:514,56,0	0/0:32,0:31:84.05:0,84,1163	0/1:10,0:8:26.31:104,0,26
chr10	32523137	.	TTTA	T	11951.34	PASS	AB=1.000;AC=39;AF=0.696;AN=56;BaseQRankSum=1.071;DP=589;FS=6.319;HRun=0;HaplotypeScore=126.6300;InbreedingCoeff=0.9281;MQ=68.51;MQ0=4;MQRankSum=2.513;QD=29.51;ReadPosRankSum=10.804;VQSLOD=3.4125;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:13:26.45:0,26,448	1/1:2,6:8:17.54:210,18,0	0/0:23,0:16:32.43:0,32,343	0/1:18,0:13:3.02:3,0,229	1/1:1,33:34:83.58:986,84,0	1/1:1,29:30:74.84:1073,75,0	1/1:3,15:17:9.51:398,10,0	0/0:31,0:30:71.48:0,71,735	1/1:2,17:19:38.67:556,39,0	1/1:2,18:20:59.75:799,60,0	1/1:1,17:18:47.67:557,48,0	1/1:2,13:15:33.07:499,33,0	1/1:1,21:22:44.79:661,45,0	1/1:3,18:21:47.49:650,47,0	0/0:24,0:24:66.35:0,66,1037	1/1:4,23:27:56.73:802,57,0	1/1:1,29:30:60.18:907,60,0	1/1:0,10:10:21.07:319,21,0	0/0:26,0:26:73.50:0,74,788	0/0:28,0:28:60.03:0,60,676	0/0:6,0:6:13.20:0,13,120	1/1:0,27:27:68.80:875,69,0	1/1:1,16:17:29.45:418,29,0	1/1:0,13:13:24.08:364,24,0	1/1:3,14:17:39.10:557,39,0	1/1:3,28:30:84:1061,84,0	0/0:32,0:31:83.82:0,84,911	1/1:4,6:8:17.97:257,18,0
chr10	32523138	.	TTA	T	6855.83	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=6.354;DP=581;FS=7.178;HRun=0;HaplotypeScore=132.7215;InbreedingCoeff=0.9884;MQ=67.23;MQ0=4;MQRankSum=2.829;QD=18.04;ReadPosRankSum=10.417;VQSLOD=3.2422;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:13:40.17:0,40,319	1/1:6,1:7:17.92:152,18,0	0/0:22,0:15:19.59:0,20,204	0/0:17,0:12:14.56:0,15,166	1/1:34,0:34:81.19:587,81,0	1/1:29,1:30:74.37:578,74,0	1/1:18,0:17:29.87:234,30,0	0/0:31,0:30:71.62:0,72,617	1/1:18,0:18:38.92:322,39,0	1/1:19,1:20:59.87:494,60,0	1/1:18,0:18:47.64:365,48,0	1/1:14,0:14:32.92:262,33,0	1/1:22,0:22:44.73:349,45,0	1/1:18,1:20:47.57:373,48,0	0/0:24,0:24:57.02:0,57,748	1/1:25,1:26:56.74:455,57,0	1/1:29,0:30:59.81:469,60,0	1/1:10,0:10:20.94:166,21,0	0/0:26,0:26:69.01:0,69,561	0/0:28,0:28:54.91:0,55,479	0/0:6,0:6:12.74:0,13,83	1/1:27,0:27:68.41:503,68,0	1/1:16,1:17:29.53:250,30,0	1/1:13,0:13:23.94:189,24,0	1/1:16,1:17:38.87:305,39,0	1/1:30,0:30:83.40:659,83,0	0/0:33,0:32:85.82:0,86,670	1/1:8,0:6:17.96:143,18,0
chr10	32523139	.	TA	T	5293.19	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=3.714;DP=528;FS=19.111;HRun=1;HaplotypeScore=123.6525;InbreedingCoeff=0.9739;MQ=69.56;MQ0=4;MQRankSum=-0.894;QD=13.97;ReadPosRankSum=7.699;VQSLOD=2.5151;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:7:23.50:0,23,157	1/1:7,0:7:17.65:108,18,0	0/0:20,0:15:9.55:0,10,178	0/0:14,0:11:12.90:0,13,109	1/1:34,0:34:78.08:479,78,0	1/1:30,0:30:72.83:438,73,0	1/1:17,0:16:29.33:175,29,0	0/0:26,0:25:53.92:0,54,478	1/1:18,0:18:38.21:231,38,0	1/1:20,0:20:58.94:380,59,0	1/1:17,1:18:47.20:297,47,0	1/1:13,1:14:32.34:196,32,0	1/1:22,0:22:43.84:261,44,0	1/1:20,0:20:46.88:280,47,0	0/0:22,0:22:55.44:0,55,559	1/1:25,1:26:55.85:340,56,0	1/1:30,0:30:58.72:352,59,0	1/1:10,0:10:20.59:124,21,0	0/0:18,0:18:48.02:0,48,438	0/0:16,0:16:32.92:0,33,272	0/0:3,0:3:8.93:0,9,67	1/1:27,0:27:67.64:414,68,0	1/1:17,0:17:28.83:177,29,0	1/1:13,0:13:23.52:142,24,0	1/1:17,0:17:38.21:236,38,0	1/1:31,0:30:82.23:551,82,0	0/0:21,0:21:51.23:0,51,412	1/1:7,1:6:17.71:114,18,0
chr10	32523800	.	C	CAG	9031.28	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=8.610;DP=775;FS=2.253;HRun=0;HaplotypeScore=110.8783;InbreedingCoeff=0.9995;MQ=73.30;MQ0=0;MQRankSum=-2.840;QD=41.81;ReadPosRankSum=-1.693;VQSLOD=5.8111;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,44:48:99:2214,123,0	0/0:9,0:9:24.08:0,24,335	0/0:23,0:24:54.18:0,54,745	0/0:20,0:20:47.86:0,48,623	0/0:30,0:30:84.28:0,84,1174	0/0:23,0:23:66.22:0,66,923	0/0:28,0:28:78.23:0,78,1054	1/1:8,33:43:99:1757,105,0	0/0:24,0:24:69.23:0,69,966	0/0:28,0:28:78.26:0,78,1079	0/0:18,0:17:51.17:0,51,713	0/0:23,0:23:60.19:0,60,823	0/0:32,0:32:90.30:0,90,1257	0/0:28,0:28:75.23:0,75,1031	0/0:38,0:38:99:0,105,1469	0/0:29,0:29:84.28:0,84,1174	0/0:41,0:41:99:0,120,1675	0/0:19,0:19:54.18:0,54,756	1/1:5,20:25:60.21:1063,60,0	1/1:3,29:33:66.23:1188,66,0	1/1:5,30:36:81.28:1459,81,0	0/0:19,0:19:45.15:0,45,631	0/0:32,0:32:93.31:0,93,1300	0/0:40,0:40:99:0,114,1577	0/0:17,0:17:48.16:0,48,672	0/0:27,0:27:81.25:0,81,1102	1/1:3,28:31:75.26:1350,75,0	0/0:10,0:10:30.10:0,30,420
chr10	32523991	.	AGGGG	A	10831.89	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-9.755;DP=485;FS=1.281;HRun=10;HaplotypeScore=98.5634;InbreedingCoeff=0.9909;MQ=67.75;MQ0=1;MQRankSum=-3.589;QD=37.10;ReadPosRankSum=3.743;VQSLOD=3.7934;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:40:81.93:0,82,487	1/1:0,7:7:15.05:243,15,0	0/0:15,0:11:21.07:0,21,474	0/0:17,0:13:26.45:0,26,482	1/1:3,18:21:39.12:631,39,0	1/1:1,9:10:18.52:292,19,0	1/1:3,18:21:45.14:728,45,0	0/0:6,0:18:38.35:0,38,309	1/1:0,15:14:36.12:583,36,0	1/1:2,15:17:45.15:723,45,0	1/1:2,12:14:36.12:582,36,0	1/1:0,14:14:30.10:485,30,0	1/1:1,16:17:36.12:583,36,0	1/1:0,16:16:48.16:777,48,0	0/0:24,0:24:63.22:0,63,1612	1/1:2,16:17:36.12:583,36,0	1/1:4,26:30:63.20:1020,63,0	1/1:1,9:10:24.07:375,24,0	0/0:5,0:21:46.79:0,47,277	0/0:0,0:15:38:0,38,223	0/0:1,0:14:32.17:0,32,190	1/1:1,6:7:15.05:243,15,0	1/1:1,11:12:24.08:389,24,0	1/1:1,7:8:18.06:291,18,0	1/1:3,20:23:60.20:971,60,0	1/1:2,18:20:51.13:799,51,0	0/0:7,0:28:50.82:0,51,341	1/1:1,11:12:33.11:534,33,0
chr10	32524160	.	T	TTAGATAGATAGATAGA	13225.32	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=1.616;DP=472;FS=4.379;HRun=0;HaplotypeScore=196.4505;InbreedingCoeff=0.4829;MQ=63.88;MQ0=5;MQRankSum=-4.255;QD=31.12;ReadPosRankSum=-1.772;VQSLOD=3.9335;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:20:18.04:526,18,0	1/1:4,0:8:6.49:258,6,0	0/0:16,0:16:9.01:0,9,146	0/0:15,0:13:6:0,6,119	1/1:20,1:22:18.06:798,18,0	1/1:11,1:12:6.02:300,6,0	1/1:11,0:11:3.01:39,3,0	1/1:42,0:39:42.14:1286,42,0	1/1:3,3:12:6.02:453,6,0	1/1:11,0:18:18.06:717,18,0	1/1:20,0:24:18.06:750,18,0	1/1:13,2:16:9.03:624,9,0	1/1:8,0:9:3.01:124,3,0	1/1:11,2:13:12.03:566,12,0	0/0:16,0:16:36.12:0,36,1510	1/1:12,2:14:15.05:1019,15,0	1/1:15,3:18:12.04:844,12,0	1/1:5,0:5:2.99:24,3,0	1/1:17,0:16:9.61:276,10,0	1/1:18,0:18:3.01:205,3,0	1/1:13,0:12:3:25,3,0	1/1:15,2:19:6.02:452,6,0	1/1:18,0:18:12.03:200,12,0	1/1:14,0:13:8.02:124,8,0	1/1:26,8:34:36.11:2262,36,0	1/1:16,0:16:18.05:924,18,0	1/1:20,0:20:3.01:204,3,0	1/1:3,1:4:3.01:227,3,0
chr10	32524189	.	T	TAGATAGATAGATAGATAGAC	17398.12	PASS	AB=1.000;AC=35;AF=0.625;AN=56;BaseQRankSum=-2.287;DP=448;FS=14.996;HRun=0;HaplotypeScore=220.5850;InbreedingCoeff=-0.1647;MQ=49.41;MQ0=14;MQRankSum=-8.673;QD=42.75;ReadPosRankSum=5.367;VQSLOD=2.4980;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:21:18.02:393,18,0	1/1:8,0:8:15.52:497,16,0	0/0:12,0:11:23.20:0,23,319	0/0:10,0:8:20.98:0,21,252	0/1:20,0:19:63.87:737,0,64	0/1:11,0:11:37.95:214,0,38	1/1:7,0:7:8.86:287,9,0	1/1:41,0:33:92.91:1868,93,0	0/1:10,0:10:12.96:451,0,13	0/1:15,0:15:88.86:622,0,89	0/1:17,0:17:37.90:614,0,38	0/1:15,0:14:54.93:428,0,55	0/1:8,0:8:56.93:409,0,57	0/1:9,0:9:12.97:353,0,13	0/0:19,0:19:53.21:0,53,2009	0/1:13,0:12:12.96:478,0,13	1/1:12,0:11:17.13:890,17,0	1/1:5,0:5:9.01:334,9,0	1/1:27,0:18:45.28:906,45,0	1/1:7,9:24:15.05:1323,15,0	1/1:12,0:10:5.99:49,6,0	0/1:16,0:16:99:313,0,148	0/1:16,0:16:65.06:609,0,65	0/1:12,0:10:29.55:352,0,30	0/1:29,0:28:45.76:2222,0,46	0/1:15,0:15:87.05:686,0,87	1/1:11,6:23:23.99:1973,24,0	0/1:19,0:16:99:392,0,246
chr10	32524255	.	C	CTG	13504.66	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-5.390;DP=419;FS=0.839;HRun=0;HaplotypeScore=101.9131;InbreedingCoeff=0.9697;MQ=77.12;MQ0=0;MQRankSum=-2.540;QD=49.29;ReadPosRankSum=5.529;VQSLOD=5.9738;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:24.08:0,24,366	1/1:0,6:6:18.06:347,18,0	0/0:23,0:22:61.75:0,62,880	0/0:10,0:10:20.12:0,20,319	1/1:2,17:19:48.16:924,48,0	1/1:2,16:18:46.40:869,46,0	1/1:0,7:7:18.06:347,18,0	0/0:25,0:25:69.16:0,69,990	1/1:0,7:7:21.07:404,21,0	1/1:1,14:16:48.12:882,48,0	1/1:2,13:15:30.10:578,30,0	1/1:2,15:17:36.01:693,36,0	1/1:0,16:16:48.16:923,48,0	1/1:0,11:11:30.10:577,30,0	0/0:14,0:14:42.14:0,42,657	1/1:1,14:15:36.10:693,36,0	1/1:0,4:4:6.02:116,6,0	1/1:0,3:3:9.03:174,9,0	0/0:14,0:14:42.14:0,42,642	0/0:18,0:18:51.17:0,51,768	0/0:10,0:10:24.08:0,24,367	1/1:0,20:20:45.15:867,45,0	1/1:2,20:22:51.17:983,51,0	1/1:2,8:10:24.08:462,24,0	1/1:0,21:21:57.20:1099,57,0	1/1:2,22:24:68.88:1236,69,0	0/0:21,0:21:45.13:0,45,687	1/1:0,23:23:69.24:1331,69,0
chr10	32524300	.	ATC	A	254.64	PASS	AB=0.858;AC=2;AF=0.038;AN=52;BaseQRankSum=3.177;DP=352;FS=7.616;HRun=0;HaplotypeScore=125.8403;InbreedingCoeff=-0.0932;MQ=38.64;MQ0=21;MQRankSum=-5.001;QD=3.80;ReadPosRankSum=-1.211;VQSLOD=1.8683;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:10:8.52:0,9,105	0/0:6,0:6:18.06:0,18,298	./.	./.	0/0:14,0:14:18.06:0,18,261	0/0:13,0:13:24.08:0,24,408	0/0:2,0:2:2.97:0,3,43	0/1:30,14:29:99:302,0,165	0/0:6,0:6:6.02:0,6,113	0/0:7,0:7:21.07:0,21,326	0/0:9,0:9:8.99:0,9,122	0/0:11,0:11:21.07:0,21,312	0/0:9,0:9:12.04:0,12,185	0/0:7,0:7:6.02:0,6,86	0/0:17,0:16:24.45:0,24,572	0/0:12,0:12:27.08:0,27,435	0/0:2,0:1:3.01:0,3,43	0/0:3,0:3:3.01:0,3,56	0/1:22,1:14:40.04:40,0,320	0/0:35,1:35:17.34:0,17,255	0/0:13,0:10:6.02:0,6,103	0/0:13,0:12:9.03:0,9,150	0/0:12,0:12:18.05:0,18,266	0/0:3,0:3:3.01:0,3,58	0/0:14,0:14:36.10:0,36,561	0/0:17,0:16:45.14:0,45,762	0/0:30,0:30:42.64:0,43,555	0/0:12,0:9:24.08:0,24,367
chr10	32524310	.	C	CTA	808.66	PASS	AB=0.959;AC=9;AF=0.173;AN=52;BaseQRankSum=1.554;DP=331;FS=4.590;HRun=0;HaplotypeScore=122.0851;InbreedingCoeff=0.1403;MQ=36.63;MQ0=16;MQRankSum=-1.072;QD=4.96;ReadPosRankSum=0.002;VQSLOD=2.8194;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,0:10:2.07:53,2,0	0/0:5,0:5:15.02:0,15,177	./.	./.	0/0:12,0:12:6.02:0,6,85	0/0:11,0:11:24.08:0,24,337	0/0:2,0:2:3.48:0,3,42	0/1:59,0:45:99:304,0,413	0/0:4,0:4:6.02:0,6,85	0/0:6,0:6:17.79:0,18,209	0/0:8,0:8:6:0,6,66	0/0:10,0:10:9.03:0,9,128	0/0:7,0:7:9.03:0,9,128	0/1:5,0:5:0:0,0,0	0/0:19,0:18:51.14:0,51,692	0/0:10,0:10:21.07:0,21,288	0/0:2,0:1:3.01:0,3,43	0/0:1,0:1:3.01:0,3,43	0/1:15,0:12:99:119,0,106	0/1:32,1:32:16.11:16,0,26	1/1:10,1:9:6.02:91,6,0	0/0:13,0:12:9.03:0,9,117	0/0:10,0:10:6.02:0,6,85	0/0:3,0:3:3.01:0,3,43	0/0:12,0:12:24.07:0,24,322	0/0:15,0:14:36.12:0,36,512	0/1:22,6:28:99:349,0,112	0/0:9,0:7:17.97:0,18,190
chr10	32524312	.	ATC	A	699.34	PASS	AB=0.894;AC=9;AF=0.173;AN=52;BaseQRankSum=3.065;DP=322;FS=2.070;HRun=0;HaplotypeScore=116.9070;InbreedingCoeff=0.3032;MQ=35.76;MQ0=16;MQRankSum=-2.935;QD=4.37;ReadPosRankSum=-1.124;VQSLOD=2.9484;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:8,4:10:8.48:56,8,0	0/0:5,0:5:15.02:0,15,215	./.	./.	0/0:12,0:12:6.02:0,6,97	0/0:11,0:11:24.08:0,24,396	0/0:2,0:2:2.97:0,3,41	0/1:62,0:48:99:143,0,448	0/0:3,0:3:6.02:0,6,111	0/0:6,0:6:5.96:0,6,210	0/0:8,0:8:5.56:0,6,76	0/0:8,0:8:9.03:0,9,142	0/0:6,0:6:9.03:0,9,142	0/0:4,0:4:0:0,0,0	0/0:18,0:17:27.46:0,27,616	0/0:10,0:10:21.07:0,21,351	0/0:2,0:1:3.01:0,3,43	0/0:1,0:1:3.01:0,3,55	0/1:14,1:12:59.75:126,0,60	1/1:25,7:31:8.25:46,8,0	1/1:8,2:8:6.02:91,6,0	0/0:12,0:12:9.03:0,9,149	0/0:8,0:8:6.02:0,6,113	0/0:3,0:3:3.01:0,3,58	0/0:10,0:10:24.07:0,24,384	0/0:14,0:13:36.12:0,36,639	0/1:19,10:29:55.09:372,0,55	0/0:8,0:6:17.97:0,18,213
chr10	32524316	.	ATC	A	1598.52	PASS	AB=0.882;AC=8;AF=0.154;AN=52;BaseQRankSum=2.527;DP=309;FS=7.413;HRun=0;HaplotypeScore=111.3741;InbreedingCoeff=0.1070;MQ=34.26;MQ0=15;MQRankSum=-2.998;QD=10.05;ReadPosRankSum=0.048;VQSLOD=2.9496;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:10,2:10:8.18:51,0,8	0/0:3,0:3:9.03:0,9,127	./.	./.	0/0:11,0:11:6.02:0,6,78	0/0:11,0:11:21.02:0,21,246	0/1:2,0:2:0.04:0,0,0	0/1:47,22:56:83.14:1121,0,83	0/0:2,0:2:6.02:0,6,87	0/1:4,0:4:3:3,0,75	0/0:7,0:7:2.58:0,3,41	0/0:7,0:7:9.03:0,9,122	0/0:6,0:6:9.01:0,9,110	0/0:4,0:4:0:0,0,0	0/0:18,0:17:27.44:0,27,615	0/0:10,0:10:21.01:0,21,250	0/0:2,0:1:3.01:0,3,36	0/0:1,0:1:3.01:0,3,40	0/1:12,3:12:20.88:310,0,21	1/1:11,19:29:6:91,6,0	0/0:8,1:8:3.11:0,3,7	0/0:11,0:11:9.01:0,9,111	0/0:8,0:8:6.02:0,6,94	0/0:3,0:3:3.01:0,3,56	0/0:8,0:8:18.06:0,18,243	0/0:12,0:11:33.11:0,33,456	0/1:22,5:27:8.16:139,0,8	0/0:5,0:4:6.02:0,6,81
chr10	32524318	.	CTATCTA	C	328.80	PASS	AB=0.956;AC=13;AF=0.500;AN=26;BaseQRankSum=2.389;DP=310;FS=1.963;HRun=0;HaplotypeScore=130.2054;InbreedingCoeff=0.2404;MQ=33.19;MQ0=15;MQRankSum=0.742;QD=3.69;ReadPosRankSum=-0.390;VQSLOD=2.2349;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:12,0:10:0.18:7,0,0	./.	./.	./.	./.	./.	1/1:1,0:1:0.47:1,0,0	0/0:75,0:62:78.23:0,78,764	./.	1/1:3,0:3:3:29,3,0	1/1:7,0:7:1.55:4,2,0	./.	./.	./.	0/0:18,0:17:43.79:0,44,785	./.	./.	./.	0/1:15,0:15:15.28:15,0,276	0/0:25,4:29:3.75:0,4,11	0/1:9,0:8:0:0,0,0	1/1:11,0:11:3:26,3,0	./.	0/1:3,0:3:0.08:0,0,0	0/0:7,0:7:3.01:0,3,68	./.	0/1:15,7:25:7.50:339,0,8	./.
chr10	32524322	.	CTA	C	211.88	PASS	AB=0.992;AC=11;AF=0.423;AN=26;BaseQRankSum=3.053;DP=296;FS=0.952;HRun=0;HaplotypeScore=112.3842;InbreedingCoeff=0.2060;MQ=32.19;MQ0=12;MQRankSum=1.294;QD=2.83;ReadPosRankSum=-0.493;VQSLOD=2.3057;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:11,0:9:0.18:6,0,0	./.	./.	0/0:9,0:1:0.47:0,0,1	./.	./.	0/1:1,0:1:0:0,0,0	0/0:76,0:66:88.09:0,88,1030	./.	1/1:3,0:3:3.01:37,3,0	1/1:6,0:6:0.47:1,0,0	./.	./.	./.	0/0:17,0:16:27.21:0,27,573	./.	./.	./.	0/1:17,0:16:23.57:24,0,297	0/0:29,1:29:3.75:0,4,11	./.	1/1:10,0:10:3:26,3,0	./.	0/1:3,0:3:0.08:0,0,0	0/0:6,0:6:3.01:0,3,53	./.	0/1:23,1:24:29.78:207,0,30	./.
chr10	32524332	.	C	CTA	644.25	PASS	AB=0.946;AC=16;AF=0.381;AN=42;BaseQRankSum=3.719;DP=241;FS=9.982;HRun=0;HaplotypeScore=112.8104;InbreedingCoeff=0.1049;MQ=35.32;MQ0=11;MQRankSum=-1.527;QD=3.72;ReadPosRankSum=-1.297;VQSLOD=1.5153;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,0:5:2.01:8,2,0	0/0:1,0:1:2.68:0,3,11	0/0:13,0:4:9.03:0,9,127	0/1:15,0:6:12.05:12,0,37	./.	0/0:4,0:4:3.40:0,3,14	0/0:1,0:1:0.47:0,0,1	0/1:67,6:66:99:465,0,843	1/1:2,0:2:2.29:6,2,0	0/0:2,0:2:4.22:0,4,24	1/1:1,0:1:0.47:1,0,0	./.	0/0:4,0:4:2.10:0,2,7	1/1:3,0:3:0.47:2,0,0	0/0:18,0:17:45.15:0,45,640	0/0:2,0:2:5.12:0,5,20	./.	./.	0/1:15,1:17:99:215,0,234	1/1:26,3:28:5.08:22,5,0	./.	0/1:1,0:1:0:0,0,0	./.	0/0:3,0:3:0:0,0,0	0/0:7,0:7:2.60:0,3,42	0/1:3,0:3:1.99:2,0,8	0/1:20,1:21:18.91:19,0,174	./.
chr10	32524334	.	ATC	A	221.59	PASS	AB=0.982;AC=15;AF=0.326;AN=46;BaseQRankSum=3.985;DP=242;FS=4.289;HRun=0;HaplotypeScore=114.5173;InbreedingCoeff=0.1671;MQ=35.24;MQ0=12;MQRankSum=-0.312;QD=1.91;ReadPosRankSum=-2.869;VQSLOD=1.6319;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:5:3.01:0,3,35	0/0:1,0:1:2.60:0,3,10	0/0:14,1:5:14.68:0,15,189	0/0:16,0:6:7.96:0,8,135	0/0:3,0:3:2.04:0,2,6	0/1:4,0:4:5.04:5,0,10	0/1:1,0:1:0:0,0,0	0/1:65,6:64:99:230,0,1649	1/1:2,0:2:5.21:21,5,0	0/0:2,0:2:0.89:0,1,2	1/1:1,0:1:2.84:14,3,0	0/1:2,0:2:0:0,0,0	0/0:4,0:4:1:0,1,3	1/1:3,0:3:0.18:1,0,0	0/0:19,0:18:45.15:0,45,817	0/0:2,0:2:4.74:0,5,17	./.	./.	0/0:18,0:17:25.80:0,26,522	0/0:29,0:28:6:0,6,76	./.	1/1:1,0:1:0.47:1,0,0	./.	0/0:3,0:3:0:0,0,0	0/1:7,0:7:9.74:10,0,50	0/1:3,0:3:7.34:7,0,8	0/1:20,1:21:41.56:42,0,264	./.
chr10	32524340	.	CTA	C	48.92	PASS	AB=0.944;AC=20;AF=0.455;AN=44;BaseQRankSum=4.596;DP=243;FS=4.899;HRun=0;HaplotypeScore=124.1067;InbreedingCoeff=0.4378;MQ=35.28;MQ0=10;MQRankSum=-3.274;QD=1.53;ReadPosRankSum=-3.990;VQSLOD=1.0187;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:5:2.40:0,2,9	1/1:1,0:1:2.97:20,3,0	0/0:18,0:6:15.01:0,15,221	0/0:18,0:7:4.42:0,4,123	0/0:1,1:2:2.04:0,2,6	0/1:4,0:4:1.05:16,0,1	./.	0/0:66,0:61:46.40:0,46,1227	1/1:2,0:2:5.21:22,5,0	1/1:2,0:2:5.90:43,6,0	1/1:1,0:1:2.84:14,3,0	0/1:2,0:2:0:0,0,0	1/1:4,0:4:2.84:9,3,0	1/1:2,1:3:0.18:1,0,0	0/0:18,0:17:42.14:0,42,731	0/1:2,0:2:2.85:9,0,3	./.	./.	0/0:21,0:21:54.95:0,55,530	0/0:29,1:29:5.80:0,6,32	./.	1/1:1,0:1:0.47:1,0,0	./.	0/0:3,0:3:0:0,0,0	0/1:5,2:7:8.48:8,0,48	1/1:2,1:3:7.77:34,8,0	0/0:21,0:21:29.59:0,30,254	./.
chr10	32524342	.	A	ACC	86.85	PASS	AB=0.833;AC=17;AF=0.405;AN=42;BaseQRankSum=5.039;DP=244;FS=11.103;HRun=0;HaplotypeScore=127.4629;InbreedingCoeff=0.5042;MQ=38.79;MQ0=10;MQRankSum=-0.058;QD=3.47;ReadPosRankSum=-1.581;VQSLOD=1.9271;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:5:3:0,3,25	1/1:0,1:1:3.01:38,3,0	0/0:16,0:6:15.52:0,16,233	0/0:18,0:8:11.96:0,12,133	./.	0/0:1,2:4:5.47:0,5,16	./.	0/0:65,0:60:99:0,172,1992	1/1:1,0:2:3.47:28,3,0	1/1:1,1:2:4.82:35,5,0	1/1:1,0:1:0.47:1,0,0	./.	1/1:1,3:4:2.98:32,3,0	1/1:2,1:3:0.47:2,0,0	0/0:19,0:18:42.14:0,42,697	0/1:0,2:2:1.37:26,0,1	./.	./.	0/0:21,0:21:61.73:0,62,677	0/0:31,0:30:5.90:0,6,50	0/1:6,0:5:0:0,0,0	0/1:1,0:1:0:0,0,0	./.	0/0:3,0:3:0:0,0,0	0/0:7,0:7:1.36:0,1,46	1/1:1,2:3:5.64:45,6,0	0/0:21,0:21:29.87:0,30,386	./.
chr10	32524346	.	CTA	C	200.11	PASS	AB=0.878;AC=27;AF=0.587;AN=46;BaseQRankSum=6.214;DP=244;FS=6.761;HRun=0;HaplotypeScore=127.1121;InbreedingCoeff=0.4797;MQ=38.78;MQ0=9;MQRankSum=-0.659;QD=2.67;ReadPosRankSum=-2.024;VQSLOD=1.6656;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:5,0:4:0:1,0,0	1/1:1,0:1:2.99:24,3,0	0/0:20,0:6:15.04:0,15,229	0/0:19,0:8:3.33:0,3,120	0/0:1,0:1:2.04:0,2,6	1/1:4,0:4:4.85:25,5,0	./.	0/0:62,0:58:79.31:0,79,1352	1/1:2,0:2:5.84:40,6,0	1/1:1,0:2:6:59,6,0	1/1:1,0:1:2.84:14,3,0	1/1:2,0:2:0.47:1,0,0	1/1:4,0:4:6.32:45,6,0	1/1:2,1:3:5.59:26,6,0	0/0:19,0:18:39.12:0,39,648	1/1:2,0:2:1.46:12,1,0	./.	./.	0/0:21,0:21:33.95:0,34,482	1/1:32,0:31:1.09:3,1,0	0/1:5,1:5:0:0,0,0	1/1:1,0:1:2.68:11,3,0	./.	0/0:3,1:4:0.47:0,0,1	0/1:5,2:7:28.85:29,0,41	1/1:3,0:3:8.21:49,8,0	0/0:21,0:21:23.51:0,24,301	./.
chr10	32524348	.	A	ACC	281.44	PASS	AB=1.000;AC=27;AF=0.643;AN=42;BaseQRankSum=7.016;DP=240;FS=18.463;HRun=0;HaplotypeScore=127.5428;InbreedingCoeff=0.4664;MQ=38.70;MQ0=8;MQRankSum=-1.024;QD=3.16;ReadPosRankSum=-0.838;VQSLOD=1.3523;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:5,0:4:0.45:1,0,0	1/1:1,0:1:3.01:38,3,0	0/0:21,0:6:15.52:0,16,229	0/1:16,0:8:6.49:6,0,110	./.	1/1:3,1:4:9.30:65,9,0	./.	0/0:60,0:56:99:0,132,1762	1/1:1,1:2:3.40:18,3,0	1/1:3,0:3:8.97:79,9,0	1/1:1,0:1:0.47:1,0,0	./.	1/1:4,0:4:5.92:40,6,0	1/1:3,0:3:3.22:13,3,0	0/0:18,0:17:36.12:0,36,584	1/1:2,0:2:5.85:46,6,0	./.	./.	0/0:22,0:22:51.49:0,51,645	1/1:32,0:31:1.32:3,1,0	0/1:5,0:4:0:0,0,0	1/1:1,0:1:2.50:9,2,0	./.	0/0:4,0:4:0:0,0,0	0/1:7,0:7:33.77:34,0,35	1/1:2,1:3:8.04:64,8,0	0/0:20,0:20:28.03:0,28,338	./.
chr10	32524351	.	T	TTC	260.79	PASS	AB=1.000;AC=24;AF=0.500;AN=48;BaseQRankSum=5.652;DP=231;FS=15.866;HRun=0;HaplotypeScore=123.1501;InbreedingCoeff=0.4981;MQ=38.93;MQ0=9;MQRankSum=-0.636;QD=6.69;ReadPosRankSum=-0.751;VQSLOD=2.0700;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:3:3:0,3,27	1/1:1,0:1:0.47:1,0,0	0/0:21,0:6:15.52:0,16,243	0/0:15,0:8:14.43:0,14,172	1/1:1,0:1:0.89:2,1,0	0/0:3,1:4:5.02:0,5,14	./.	0/0:52,0:49:99:0,142,1858	1/1:2,0:2:2.90:27,3,0	0/0:3,0:3:6.09:0,6,20	1/1:1,0:1:0.47:1,0,0	1/1:3,0:3:3.47:26,3,0	1/1:2,2:4:6.49:69,6,0	1/1:2,1:3:5.81:50,6,0	0/0:17,0:16:33.11:0,33,538	0/0:1,1:2:3.28:0,3,9	1/1:3,0:3:5.97:45,6,0	./.	0/0:19,0:19:56.53:0,57,678	0/0:31,0:30:5.87:0,6,55	0/1:5,0:4:0:0,0,0	1/1:1,0:1:3.01:34,3,0	./.	1/1:5,0:5:2.69:14,3,0	0/1:7,0:7:33.14:93,0,33	1/1:1,2:3:3.11:42,3,0	0/0:20,0:20:29.92:0,30,388	./.
chr10	32524354	.	ATC	A	829.62	PASS	AB=0.794;AC=13;AF=0.271;AN=48;BaseQRankSum=0.799;DP=220;FS=3.820;HRun=0;HaplotypeScore=105.3663;InbreedingCoeff=0.2698;MQ=39.26;MQ0=9;MQRankSum=-1.882;QD=6.48;ReadPosRankSum=0.456;VQSLOD=3.2534;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,1:3:3.48:47,3,0	0/0:1,0:1:2.90:0,3,16	0/0:21,0:6:15.05:0,15,264	0/0:15,0:8:18.94:0,19,225	0/0:1,0:1:2.94:0,3,18	0/0:4,0:4:10.20:0,10,73	./.	0/1:33,13:43:99:508,0,710	0/0:2,0:2:4.55:0,5,29	0/0:3,0:3:8.96:0,9,83	1/1:1,0:1:2.84:14,3,0	0/1:3,0:3:2.17:2,0,12	0/0:4,0:4:8.79:0,9,53	0/0:3,0:3:5.16:0,5,25	0/0:16,0:15:30.10:0,30,559	0/0:2,0:2:5.96:0,6,43	1/1:3,0:3:6.66:22,7,0	./.	0/1:14,4:18:99:251,0,192	1/1:17,12:28:5.76:91,6,0	0/1:1,4:4:0:0,0,0	0/0:1,0:1:2.94:0,3,18	./.	0/0:5,0:5:0.31:0,0,1	0/0:7,0:7:19.21:0,19,149	0/0:3,0:3:9.02:0,9,102	0/1:14,4:18:24.74:25,0,172	./.
chr10	32524362	.	ATCTTTCTTTCTT	A	159.37	PASS	AC=4;AF=0.105;AN=38;BaseQRankSum=0.941;DP=189;FS=0.000;HRun=0;HaplotypeScore=116.0965;InbreedingCoeff=0.3110;MQ=41.17;MQ0=9;MQRankSum=0.500;QD=5.31;ReadPosRankSum=1.501;VQSLOD=1.4549;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/0:1,0:1:3.01:0,3,70	./.	./.	0/0:1,0:1:3.01:0,3,74	0/0:4,0:4:12.04:0,12,333	./.	./.	0/0:2,0:2:6.02:0,6,157	0/0:3,0:3:9.03:0,9,223	0/0:1,0:1:3.01:0,3,59	0/0:3,0:3:3.01:0,3,81	0/0:5,0:4:9.92:0,10,232	0/0:3,0:3:9.03:0,9,201	./.	0/0:2,0:2:6.02:0,6,166	0/0:3,0:3:3.01:0,3,40	./.	1/1:14,0:15:6.02:167,6,0	0/0:24,0:28:5.54:0,6,14	0/0:5,0:4:0.47:0,0,1	0/0:2,0:1:3.01:0,3,70	./.	0/0:5,0:5:1.36:0,1,4	0/0:7,0:7:18.06:0,18,436	0/0:3,0:3:9.03:0,9,273	1/1:13,0:14:1.27:81,1,0	./.
chr10	32524433	.	TC	T	6706.98	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=14.122;DP=507;FS=12.532;HRun=7;HaplotypeScore=168.2685;InbreedingCoeff=0.9857;MQ=59.61;MQ0=0;MQRankSum=-0.689;QD=21.16;ReadPosRankSum=6.098;VQSLOD=3.0996;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:23.86:0,24,213	1/1:0,11:11:27.06:273,27,0	0/0:26,0:24:56:0,56,684	0/0:18,0:13:31.28:0,31,348	1/1:0,27:27:66.14:667,66,0	1/1:0,20:20:39.08:393,39,0	1/1:3,9:12:15.03:152,15,0	0/0:38,0:36:90.19:0,90,1075	1/1:0,14:14:27.05:273,27,0	1/1:1,24:25:66.14:666,66,0	1/1:2,18:20:27.06:274,27,0	1/1:0,19:19:48.10:486,48,0	1/1:1,19:20:51.10:515,51,0	1/1:1,12:13:17.86:175,18,0	0/0:13,0:13:24.03:0,24,284	1/1:0,14:14:33.01:322,33,0	1/1:1,8:9:18.01:181,18,0	1/1:0,6:6:15.03:150,15,0	0/0:26,0:26:75.24:0,75,943	0/0:26,0:26:42.09:0,42,504	0/0:10,0:10:24.08:0,24,300	1/1:2,18:20:33.05:334,33,0	1/1:2,15:17:27.05:271,27,0	1/1:1,17:18:27.05:272,27,0	1/1:0,21:21:39.08:393,39,0	1/1:0,26:26:78.16:788,78,0	0/0:22,0:22:63.20:0,63,790	1/1:0,5:5:12.03:122,12,0
chr10	32524716	.	T	TG	23878.59	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=1.127;DP=606;FS=0.000;HRun=0;HaplotypeScore=109.7707;InbreedingCoeff=0.8970;MQ=66.63;MQ0=0;MQRankSum=-2.314;QD=42.79;ReadPosRankSum=1.407;VQSLOD=4.5006;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,19:19:54.18:863,54,0	1/1:0,12:12:26.91:431,27,0	0/0:4,0:4:3:0,3,27	0/0:8,0:10:25.65:0,26,271	1/1:1,38:39:99:1649,105,0	1/1:1,31:31:84.29:1343,84,0	1/1:0,24:24:60.20:959,60,0	1/1:1,22:23:66.21:1033,66,0	1/1:0,24:24:66.23:1055,66,0	1/1:0,27:27:81.28:1294,81,0	1/1:0,13:13:33.11:527,33,0	1/1:0,23:23:69.23:1091,69,0	1/1:0,20:20:54.18:863,54,0	1/1:2,36:38:99:1600,102,0	0/0:34,0:34:99:0,102,1426	1/1:1,20:21:57.19:911,57,0	1/1:0,29:29:81.28:1295,81,0	1/1:0,11:11:27.09:432,27,0	1/1:1,18:19:57.19:910,57,0	1/1:1,32:33:75.25:1141,75,0	1/1:0,22:22:63.21:1005,63,0	1/1:0,23:23:66.22:1041,66,0	1/1:0,22:22:51.17:788,51,0	1/1:0,15:15:42.14:672,42,0	1/1:0,20:20:54.18:836,54,0	1/1:0,22:22:60.20:955,60,0	1/1:0,24:24:69.24:1103,69,0	1/1:0,3:3:6.02:84,6,0
chr10	32525117	.	A	AAAC	25740.08	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=4.341;DP=595;FS=15.081;HRun=0;HaplotypeScore=115.5005;InbreedingCoeff=0.9813;MQ=87.22;MQ0=0;MQRankSum=-8.036;QD=49.03;ReadPosRankSum=1.996;VQSLOD=6.4580;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,0:16:44.96:391,45,0	1/1:0,9:9:24.08:550,24,0	0/0:26,0:26:69.34:0,69,1094	0/0:17,0:17:35.79:0,36,590	1/1:1,36:37:93.32:2063,93,0	1/1:1,22:24:52.42:1140,52,0	1/1:1,12:13:36.12:824,36,0	1/1:1,0:34:90.77:828,91,0	1/1:0,19:19:54.19:1238,54,0	1/1:1,27:28:81.28:1818,81,0	1/1:1,26:29:75.06:1586,75,0	1/1:2,19:22:57.15:1225,57,0	1/1:1,25:26:66.23:1512,66,0	1/1:1,16:18:45.15:1030,45,0	0/0:27,0:27:81.24:0,81,1291	1/1:0,19:20:54.19:1239,54,0	1/1:2,10:12:27.09:605,27,0	1/1:1,6:7:15.05:344,15,0	1/1:0,0:9:26.97:226,27,0	1/1:1,0:29:83.80:694,84,0	1/1:1,0:19:50.94:430,51,0	1/1:0,32:32:87.13:1890,87,0	1/1:1,29:31:81.06:1751,81,0	1/1:0,5:5:12.04:275,12,0	1/1:0,24:24:69.24:1581,69,0	1/1:1,16:18:54.15:1150,54,0	1/1:1,0:36:95.86:803,96,0	1/1:1,7:8:24.08:549,24,0
chr10	32526251	.	C	CT	2301.84	PASS	AB=0.958;AC=13;AF=0.232;AN=56;BaseQRankSum=8.331;DP=529;FS=0.928;HRun=10;HaplotypeScore=77.6112;InbreedingCoeff=0.8860;MQ=82.76;MQ0=0;MQRankSum=-3.506;QD=15.66;ReadPosRankSum=-2.963;VQSLOD=3.3390;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,11:24:47.67:439,48,0	0/0:2,0:2:5.99:0,6,49	0/1:22,1:22:8.15:8,0,200	0/0:19,0:17:12.17:0,12,163	0/0:16,0:17:34.93:0,35,271	0/0:27,0:27:71.90:0,72,591	0/0:29,0:29:71.87:0,72,588	1/1:9,19:28:57.09:581,57,0	0/0:19,0:20:49.91:0,50,391	0/0:14,0:16:39.98:0,40,300	0/0:10,0:9:23.97:0,24,197	0/0:24,0:24:56.92:0,57,468	0/0:28,1:28:42.92:0,43,559	0/0:16,0:17:43.98:0,44,351	0/0:21,0:22:52.94:0,53,422	0/0:20,0:20:53.92:0,54,443	0/0:19,0:19:48.41:0,48,395	0/0:21,0:21:56.88:0,57,461	1/1:11,10:21:40.20:382,40,0	1/1:4,11:15:30.08:319,30,0	1/1:3,9:12:27.91:276,28,0	0/0:7,0:8:20.01:0,20,154	0/0:13,0:13:38.95:0,39,320	0/0:9,0:9:23.96:0,24,197	0/0:15,0:15:35.95:0,36,296	0/0:26,0:26:50.91:0,51,419	1/1:9,13:23:39.85:485,40,0	0/0:19,0:18:56.93:0,57,467
chr10	32526310	.	ACTGAAC	A	4600.82	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=10.300;DP=429;FS=24.690;HRun=0;HaplotypeScore=123.1846;InbreedingCoeff=0.9682;MQ=79.54;MQ0=0;MQRankSum=-11.359;QD=56.80;ReadPosRankSum=-0.078;VQSLOD=3.0392;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,11:15:33.11:776,33,0	0/0:4,0:4:12.04:0,12,432	0/0:17,0:17:44.68:0,45,1340	0/0:8,0:8:21.05:0,21,548	0/0:22,0:22:63.22:0,63,2268	0/0:14,0:14:39.13:0,39,1326	0/0:23,0:23:69.22:0,69,2379	1/1:4,16:20:48.12:1035,48,0	0/0:19,0:19:54.19:0,54,1920	0/0:15,0:15:45.15:0,45,1614	0/0:14,0:14:42.13:0,42,1415	0/0:8,0:8:21.07:0,21,757	0/0:29,0:28:81.26:0,81,2819	0/0:12,0:12:33.10:0,33,1104	0/0:16,0:16:45.15:0,45,1621	0/0:13,0:13:36.11:0,36,1213	0/0:16,0:16:45.15:0,45,1602	0/0:30,0:29:87.30:0,87,3124	1/1:3,9:12:30.10:702,30,0	1/1:2,10:12:30.10:720,30,0	1/1:2,2:4:6.02:144,6,0	0/0:12,0:12:36.12:0,36,1291	0/0:30,0:30:87.30:0,87,3136	0/0:7,0:7:18.06:0,18,649	0/0:14,0:14:42.14:0,42,1505	0/0:17,0:17:48.16:0,48,1713	1/1:1,17:18:51.18:1224,51,0	0/0:8,0:8:24.08:0,24,762
chr10	32526394	.	A	AT	1296.64	PASS	AB=0.500;AC=11;AF=0.196;AN=56;BaseQRankSum=-8.067;DP=322;FS=10.232;HRun=9;HaplotypeScore=89.1001;InbreedingCoeff=0.8121;MQ=53.92;MQ0=11;MQRankSum=-5.753;QD=18.79;ReadPosRankSum=-0.881;VQSLOD=3.0246;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,1:3:3.01:33,3,0	0/0:7,0:7:14.92:0,15,121	0/0:11,0:6:6.19:0,6,73	0/0:7,0:4:2.70:0,3,7	0/0:18,0:17:41.57:0,42,344	0/0:14,0:14:35.92:0,36,310	0/0:9,0:9:20.92:0,21,173	1/1:8,13:21:39.03:406,39,0	0/0:13,0:12:29.98:0,30,256	0/0:16,0:16:38.68:0,39,329	0/0:16,0:16:44.89:0,45,380	0/0:12,0:12:20.99:0,21,182	0/0:14,0:13:29.99:0,30,259	0/0:6,0:6:12:0,12,104	0/0:9,0:9:23.98:0,24,205	0/0:6,0:5:9:0,9,78	0/0:11,0:11:22.77:0,23,228	0/0:15,0:14:23.98:0,24,208	1/1:7,6:12:21.06:231,21,0	1/1:4,14:18:48.13:524,48,0	0/1:0,1:1:0:0,0,0	0/0:8,0:8:24:0,24,208	0/0:16,0:16:27.44:0,27,231	0/0:2,0:2:3:0,3,26	0/0:14,0:13:20.97:0,21,180	0/0:17,0:17:38.97:0,39,332	1/1:3,7:10:24.06:265,24,0	0/0:10,0:10:24:0,24,208
chr10	32526411	.	A	ATTT	6795.81	PASS	AB=0.730;AC=43;AF=0.827;AN=52;BaseQRankSum=2.908;DP=296;FS=4.199;HRun=9;HaplotypeScore=65.5422;InbreedingCoeff=0.4473;MQ=42.89;MQ0=26;MQRankSum=-2.512;QD=25.17;ReadPosRankSum=1.477;VQSLOD=2.9562;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:5,0:2:0:0,0,0	1/1:2,5:7:15.05:279,15,0	0/0:7,0:3:2.92:0,3,18	0/0:5,0:3:0.47:0,0,1	1/1:5,12:15:33.07:605,33,0	1/1:6,9:14:30.10:591,30,0	1/1:3,7:10:15.01:256,15,0	1/1:9,0:10:5.46:25,5,0	1/1:3,9:12:24.06:437,24,0	1/1:2,13:15:33.07:611,33,0	1/1:3,13:15:36.12:709,36,0	1/1:3,7:9:12.04:237,12,0	1/1:5,8:12:15.05:296,15,0	1/1:0,4:4:9.03:177,9,0	0/0:8,0:8:18.03:0,18,227	1/1:2,8:8:12.04:237,12,0	0/1:7,5:13:19.83:262,0,20	0/1:6,6:9:22.83:222,0,23	1/1:6,0:8:4.22:23,4,0	1/1:3,0:17:17.97:55,18,0	./.	1/1:4,5:8:15.05:296,15,0	1/1:2,6:7:18.06:355,18,0	./.	1/1:7,9:14:18.02:316,18,0	1/1:7,9:14:21.03:371,21,0	1/1:4,0:11:9.61:21,10,0	1/1:2,7:9:21.07:414,21,0
chr10	32527741	.	C	CATGT	1705.35	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-11.079;DP=788;FS=4.459;HRun=0;HaplotypeScore=227.3070;InbreedingCoeff=0.9066;MQ=72.68;MQ0=9;MQRankSum=-0.703;QD=9.22;ReadPosRankSum=-1.542;VQSLOD=2.6961;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:26:45.97:239,46,0	0/0:21,0:21:23.71:0,24,330	0/0:36,0:31:3.01:0,3,42	0/0:39,0:29:5.79:0,6,36	0/0:36,0:36:48.84:0,49,676	0/0:39,0:39:60.63:0,61,815	0/0:26,0:26:42.11:0,42,574	1/1:36,0:36:20.48:133,20,0	0/0:27,0:27:39.57:0,40,522	0/0:31,0:31:52.11:0,52,759	0/0:26,0:26:45.11:0,45,599	0/0:29,0:29:48.09:0,48,654	0/0:37,0:37:64.11:0,64,852	0/0:26,0:26:37.84:0,38,521	1/1:12,22:34:45.15:1073,45,0	0/0:31,0:31:63.14:0,63,883	0/0:11,0:10:20.98:0,21,254	0/0:17,0:17:27.50:0,27,333	1/1:22,0:22:9.38:146,9,0	0/0:35,0:34:49.12:0,49,481	1/1:25,0:23:5.47:25,5,0	0/0:19,0:19:27.50:0,27,377	0/0:22,0:22:39.10:0,39,534	0/0:25,0:25:51.11:0,51,695	0/0:23,0:23:42.60:0,43,600	0/0:32,0:32:63.20:0,63,915	1/1:42,0:41:51.72:268,52,0	0/0:15,0:14:30.06:0,30,373
chr10	32527772	.	GTA	G	9216.66	PASS	AB=0.987;AC=45;AF=0.804;AN=56;BaseQRankSum=5.410;DP=756;FS=20.279;HRun=0;HaplotypeScore=195.3684;InbreedingCoeff=0.5704;MQ=58.75;MQ0=22;MQRankSum=-0.315;QD=14.63;ReadPosRankSum=3.347;VQSLOD=3.4978;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,1:34:2.07:0,2,141	1/1:16,0:16:1.89:147,2,0	0/0:35,0:26:63.07:0,63,876	0/0:27,0:17:39.10:0,39,551	1/1:31,0:31:31.44:348,31,0	1/1:31,0:31:28.56:464,29,0	1/1:32,0:32:53.43:523,53,0	1/1:32,0:27:47.79:703,48,0	1/1:24,0:24:25.63:318,26,0	1/1:34,0:34:97.85:697,98,0	1/1:24,0:24:6.70:308,7,0	1/1:30,0:29:32.17:398,32,0	1/1:34,0:34:29.60:484,30,0	1/1:23,0:23:42.88:319,43,0	0/0:30,0:30:63.17:0,63,768	1/1:31,0:31:62.51:453,63,0	1/1:13,0:12:29.90:237,30,0	1/1:14,0:14:32.88:266,33,0	0/1:24,1:21:73.78:304,0,74	1/1:4,32:29:69.23:975,69,0	1/1:20,4:18:5.53:61,6,0	1/1:23,0:23:48.03:331,48,0	0/1:21,0:21:2.22:249,0,2	1/1:27,0:27:62.59:455,63,0	1/1:23,0:23:24.63:304,25,0	1/1:27,0:27:76.97:518,77,0	0/1:38,0:36:69.89:70,0,122	1/1:17,0:16:35.83:284,36,0
chr10	32527774	.	A	ATG	5262.12	PASS	AB=0.995;AC=28;AF=0.500;AN=56;BaseQRankSum=-11.457;DP=757;FS=4.466;HRun=0;HaplotypeScore=212.4143;InbreedingCoeff=-0.3076;MQ=59.23;MQ0=21;MQRankSum=-1.430;QD=8.50;ReadPosRankSum=-4.412;VQSLOD=3.4599;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,36:40:48.16:911,48,0	0/0:15,0:15:4.25:0,4,178	0/0:34,0:25:66:0,66,875	0/0:27,0:17:39.08:0,39,525	0/0:30,0:30:26.58:0,27,350	0/1:30,0:30:50.03:50,0,399	0/1:30,0:30:99:198,0,253	1/1:3,28:27:66.18:963,66,0	0/1:23,0:23:34.25:34,0,240	0/1:34,0:34:99:285,0,375	0/1:23,0:23:29.23:29,0,298	0/1:32,0:31:39.92:40,0,293	0/1:34,0:34:71.38:71,0,400	0/1:21,0:21:14.90:15,0,243	0/1:29,0:29:99:186,0,212	0/0:32,0:32:41.40:0,41,461	0/1:12,0:12:70.68:71,0,90	0/1:14,0:14:28.41:28,0,119	1/1:6,20:22:26.41:836,26,0	0/1:34,2:29:23.56:95,0,24	1/1:10,16:20:5.97:102,6,0	0/1:23,0:23:96.18:96,0,161	0/1:20,0:20:17.77:18,0,282	0/1:26,1:27:28.39:28,0,314	0/1:24,0:24:10.06:10,0,310	0/1:28,0:28:39.24:39,0,473	1/1:0,37:36:60.21:1140,60,0	0/1:17,0:16:15.63:16,0,137
chr10	32527776	.	ATG	A	16963.19	PASS	AB=1.000;AC=43;AF=0.768;AN=56;BaseQRankSum=-3.154;DP=735;FS=17.318;HRun=0;HaplotypeScore=168.5297;InbreedingCoeff=0.6823;MQ=59.35;MQ0=20;MQRankSum=-1.008;QD=29.60;ReadPosRankSum=2.385;VQSLOD=5.5018;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:29.49:0,29,564	1/1:1,12:13:24.08:365,24,0	0/0:33,0:24:63.21:0,63,1144	0/0:26,0:16:42.13:0,42,729	1/1:6,25:31:63.15:878,63,0	1/1:0,28:28:72.24:1100,72,0	1/1:1,28:29:75.25:1133,75,0	0/1:30,0:25:44.13:253,0,44	1/1:3,19:22:54.15:781,54,0	1/1:2,33:35:99:1523,102,0	1/1:2,21:23:51.17:780,51,0	1/1:6,25:30:66.18:941,66,0	1/1:3,28:31:72.24:1097,72,0	1/1:2,17:19:48.14:708,48,0	0/0:28,0:28:66.21:0,66,1179	1/1:2,28:30:66.21:988,66,0	1/1:0,11:11:30.10:458,30,0	1/1:1,13:14:36.08:523,36,0	0/1:24,0:20:98.82:99,0,262	1/1:38,0:31:2.80:349,3,0	0/1:24,0:18:8.25:8,0,42	1/1:5,18:23:51.16:756,51,0	1/1:3,18:21:45.14:667,45,0	1/1:3,25:28:66.21:987,66,0	1/1:3,21:24:54.16:784,54,0	1/1:2,26:28:84.22:1239,84,0	0/0:36,0:34:15.55:0,16,519	1/1:1,15:16:36.08:547,36,0
chr10	32527847	.	GGT	G	15920.28	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=10.855;DP=670;FS=4.638;HRun=0;HaplotypeScore=139.2175;InbreedingCoeff=0.9950;MQ=84.48;MQ0=5;MQRankSum=-5.439;QD=38.83;ReadPosRankSum=5.469;VQSLOD=6.3701;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,102,1892	1/1:1,11:12:33.11:486,33,0	0/0:28,0:27:81.22:0,81,1456	0/0:22,0:22:59.95:0,60,989	1/1:0,32:31:78.26:1148,78,0	1/1:1,17:18:54.18:795,54,0	1/1:4,22:26:69.23:1016,69,0	0/0:37,0:37:99:0,111,2000	1/1:2,27:29:78.26:1148,78,0	1/1:3,29:32:93.31:1369,93,0	1/1:2,15:17:33.11:486,33,0	1/1:2,24:26:72.24:1059,72,0	1/1:2,28:30:72.24:1060,72,0	1/1:0,26:26:75.25:1104,75,0	0/0:27,0:27:78.27:0,78,1460	1/1:1,20:21:63.19:906,63,0	1/1:0,13:13:30.10:442,30,0	1/1:0,4:4:12.04:177,12,0	0/0:19,0:18:51.17:0,51,954	0/0:23,0:20:57.20:0,57,1065	0/0:31,0:28:63.22:0,63,1179	1/1:2,23:25:66.22:971,66,0	1/1:1,19:20:42.14:618,42,0	1/1:0,15:15:42.14:619,42,0	1/1:2,31:33:81.27:1192,81,0	1/1:0,19:19:57.19:839,57,0	0/0:28,0:28:57.20:0,57,1067	1/1:4,8:12:33.11:486,33,0
chr10	32527904	.	G	GT	6783.32	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-15.841;DP=667;FS=0.349;HRun=1;HaplotypeScore=116.1988;InbreedingCoeff=0.9785;MQ=91.64;MQ0=0;MQRankSum=-1.174;QD=39.90;ReadPosRankSum=-0.368;VQSLOD=4.3810;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,36:37:93.26:1393,93,0	0/0:9,0:8:24.08:0,24,311	0/0:28,0:28:71.87:0,72,878	0/0:30,0:30:84.74:0,85,1081	0/0:26,0:24:51.14:0,51,633	0/0:22,0:22:66.16:0,66,833	0/0:34,0:34:90.27:0,90,1139	1/1:2,31:33:93.29:1354,93,0	0/0:30,0:30:84.26:0,84,1074	0/0:20,0:20:60.18:0,60,763	0/0:14,0:14:39.08:0,39,487	0/0:26,0:26:78.22:0,78,972	0/0:27,0:27:72.21:0,72,906	0/0:27,0:27:75.23:0,75,957	0/0:29,0:29:87.27:0,87,1114	0/0:30,0:30:87.25:0,87,1100	0/0:14,0:14:33.05:0,33,395	0/0:2,0:2:6.02:0,6,78	1/1:1,12:13:39.07:518,39,0	1/1:1,15:15:39.09:553,39,0	1/1:0,28:28:81.27:1213,81,0	0/0:19,0:19:57.12:0,57,718	0/0:16,0:15:45.08:0,45,563	0/0:22,0:22:63.19:0,63,804	0/0:30,0:30:72.19:0,72,915	0/0:29,0:28:81.25:0,81,1038	1/1:0,43:43:99:1752,117,0	0/0:13,0:13:39.13:0,39,506
chr10	32528171	.	C	CACATAT	2394.46	PASS	AB=1.000;AC=38;AF=0.864;AN=44;BaseQRankSum=-0.757;DP=623;FS=10.150;HRun=0;HaplotypeScore=187.9411;InbreedingCoeff=0.1914;MQ=59.74;MQ0=1;MQRankSum=0.578;QD=4.85;ReadPosRankSum=0.783;VQSLOD=2.0765;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:16:3.01:0,3,34	1/1:7,0:6:2.98:22,3,0	./.	./.	1/1:37,0:31:8.21:55,8,0	0/1:29,0:27:10.93:153,0,11	1/1:17,0:17:0.89:2,1,0	./.	1/1:29,0:27:5.69:119,6,0	1/1:32,0:31:45.12:761,45,0	1/1:21,0:19:9:124,9,0	1/1:28,0:26:9.03:147,9,0	1/1:22,0:21:9:98,9,0	1/1:21,0:18:5.68:75,6,0	./.	1/1:26,0:21:3.01:50,3,0	1/1:21,0:21:12.47:154,12,0	0/1:10,0:10:16.98:17,0,43	1/1:12,0:12:5.93:40,6,0	0/1:32,0:29:0:0,0,0	./.	0/1:7,0:7:0:0,0,0	1/1:20,0:17:2.87:25,3,0	1/1:11,0:11:2.99:23,3,0	1/1:32,0:30:12.03:198,12,0	1/1:33,0:23:20.47:314,20,0	1/1:47,0:45:14.08:122,14,0	./.
chr10	32528249	.	TAC	T	10680.40	PASS	AB=0.788;AC=38;AF=0.679;AN=56;BaseQRankSum=-2.927;DP=735;FS=1.574;HRun=0;HaplotypeScore=160.9473;InbreedingCoeff=0.6203;MQ=49.96;MQ0=7;MQRankSum=3.436;QD=18.80;ReadPosRankSum=8.950;VQSLOD=4.7252;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:16:6.39:0,6,41	1/1:2,10:11:24.08:303,24,0	0/0:36,0:23:60.02:0,60,882	0/0:26,0:17:38.87:0,39,526	1/1:20,18:33:44.98:543,45,0	1/1:13,18:29:42.13:530,42,0	1/1:7,18:25:28.72:409,29,0	0/0:27,0:22:23.68:0,24,162	1/1:8,25:31:56.79:718,57,0	0/1:14,24:37:35.59:793,0,36	1/1:9,28:36:72.23:908,72,0	1/1:12,22:32:54.17:681,54,0	1/1:5,21:25:56.94:718,57,0	1/1:8,17:22:45.14:567,45,0	0/0:20,0:20:51.16:0,51,808	1/1:11,16:22:36.11:450,36,0	1/1:5,16:21:38.74:491,39,0	1/1:3,14:17:30.30:391,30,0	0/1:18,0:16:3.97:4,0,133	0/0:29,0:22:2.81:0,3,25	0/0:11,0:10:2.66:0,3,21	1/1:1,15:16:30.10:378,30,0	1/1:5,17:20:41.95:529,42,0	1/1:3,19:22:33.10:413,33,0	1/1:11,26:35:63.20:794,63,0	1/1:18,22:30:48.12:797,48,0	0/1:40,0:38:55.28:55,0,145	0/1:1,6:7:11.84:206,0,12
chr10	32530122	.	TA	T	2341.78	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=5.730;DP=406;FS=14.286;HRun=9;HaplotypeScore=44.1687;InbreedingCoeff=0.9829;MQ=58.21;MQ0=16;MQRankSum=0.462;QD=19.35;ReadPosRankSum=-1.826;VQSLOD=1.9307;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,19:22:54.03:494,54,0	0/0:4,0:4:12.04:0,12,139	0/0:12,0:8:23.99:0,24,245	0/0:9,0:6:12.03:0,12,135	0/0:14,0:14:39.12:0,39,450	0/0:21,0:20:27.42:0,27,547	0/0:13,0:13:30.05:0,30,330	1/1:10,22:32:66.02:603,66,0	0/0:10,0:10:27.08:0,27,312	0/0:22,0:20:57.17:0,57,658	0/0:19,0:19:51.15:0,51,586	0/0:11,0:11:33.01:0,33,351	0/0:16,0:15:42.12:0,42,484	0/0:9,0:7:18.05:0,18,208	0/0:18,0:18:54.16:0,54,623	0/0:13,0:13:36.07:0,36,400	0/0:10,0:10:27.08:0,27,312	0/0:12,0:12:33.10:0,33,381	1/1:3,13:13:36.02:329,36,0	1/1:2,15:17:36:329,36,0	1/1:1,15:16:41.06:363,41,0	0/0:10,0:10:24.07:0,24,277	0/0:14,0:14:33.08:0,33,371	0/0:16,0:16:39.12:0,39,450	0/0:10,0:10:24.07:0,24,277	0/0:14,0:11:33.10:0,33,381	1/1:0,16:16:45.02:412,45,0	0/0:7,0:7:20.89:0,21,222
chr10	32530249	.	C	CATCTATCTATCT	10270.29	PASS	AB=0.864;AC=45;AF=0.900;AN=50;BaseQRankSum=-1.865;DP=587;FS=1.125;HRun=0;HaplotypeScore=207.4655;InbreedingCoeff=0.2932;MQ=56.10;MQ0=1;MQRankSum=-1.570;QD=19.67;ReadPosRankSum=-0.120;VQSLOD=3.7988;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:32:21.07:424,21,0	1/1:6,0:7:9.02:247,9,0	0/1:12,0:11:0:0,0,0	./.	1/1:11,0:19:10.02:141,10,0	1/1:11,9:31:12.04:597,12,0	1/1:10,0:12:11.86:187,12,0	1/1:48,0:48:24.08:355,24,0	1/1:19,0:26:34.62:662,35,0	1/1:6,9:21:33.70:1042,34,0	1/1:9,0:16:6.02:152,6,0	1/1:16,0:21:21.07:630,21,0	1/1:12,0:19:27.07:560,27,0	1/1:8,0:12:15.02:378,15,0	0/0:22,0:22:36.12:0,36,946	1/1:14,5:26:6.02:347,6,0	./.	1/1:11,5:20:9.03:402,9,0	1/1:9,0:15:21.06:443,21,0	1/1:11,0:27:3.01:76,3,0	./.	1/1:19,0:22:8.72:255,9,0	0/1:8,12:26:57.02:168,0,57	1/1:8,7:18:4.78:179,5,0	1/1:14,0:16:15.05:236,15,0	1/1:13,16:36:72.21:2596,72,0	1/1:13,0:30:5.65:152,6,0	0/1:9,0:9:22.25:40,0,22
chr10	32531697	.	ATGTGTGTGTG	A	6087.22	PASS	AB=0.734;AC=34;AF=0.607;AN=56;BaseQRankSum=6.093;DP=652;FS=5.505;HRun=0;HaplotypeScore=204.1102;InbreedingCoeff=0.5119;MQ=64.62;MQ0=12;MQRankSum=-4.686;QD=15.26;ReadPosRankSum=1.127;VQSLOD=3.5652;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:35:3.66:0,4,193	0/1:5,6:11:12.92:178,0,13	0/0:42,0:27:6.02:0,6,127	0/0:43,0:31:12.74:0,13,203	0/1:10,9:21:0.36:98,0,0	1/1:9,9:20:18.45:379,18,0	0/1:11,8:19:1.01:38,0,1	0/0:35,0:33:21.05:0,21,217	1/1:8,17:26:23.49:388,23,0	1/1:14,7:22:16.09:466,16,0	1/1:13,9:23:8.49:211,8,0	1/1:4,11:17:23.53:493,24,0	1/1:8,19:26:42.48:1045,42,0	1/1:13,10:23:24.47:578,24,0	0/0:31,0:33:60.17:0,60,2445	1/1:10,10:21:21.07:607,21,0	0/1:21,0:22:2.79:154,0,3	0/1:21,5:24:75.93:76,0,174	0/0:22,0:22:6.01:0,6,57	0/0:10,0:15:9.01:0,9,110	0/0:25,0:27:18:0,18,215	1/1:11,6:17:11.95:167,12,0	1/1:10,7:18:13.76:240,14,0	1/1:7,13:21:3.40:90,3,0	1/1:7,6:14:11.16:86,11,0	1/1:10,9:19:24.42:510,24,0	0/1:11,0:24:37.07:37,0,76	1/1:3,2:6:9.03:249,9,0
chr10	32532139	.	C	CA	12137.46	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-15.223;DP=669;FS=5.899;HRun=8;HaplotypeScore=60.7872;InbreedingCoeff=0.9976;MQ=80.58;MQ0=0;MQRankSum=-1.620;QD=28.90;ReadPosRankSum=4.913;VQSLOD=4.8901;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:72.03:0,72,658	1/1:0,14:14:39.12:450,39,0	0/0:20,0:20:31.93:0,32,348	0/0:15,0:15:20.66:0,21,176	1/1:8,31:39:87.22:989,87,0	1/1:5,33:38:99:1143,99,0	1/1:4,8:12:21.06:242,21,0	0/0:41,0:41:99:0,102,930	1/1:2,21:23:63.19:727,63,0	1/1:6,23:30:46.70:751,47,0	1/1:6,27:33:59.75:921,60,0	1/1:2,8:10:24.07:277,24,0	1/1:2,21:23:51.15:588,51,0	1/1:0,14:14:42.12:485,42,0	0/0:28,0:27:78.04:0,78,714	1/1:0,27:27:81.24:935,81,0	1/1:1,17:18:42.12:485,42,0	1/1:1,10:11:30.09:346,30,0	0/0:26,0:26:63.02:0,63,576	0/0:40,0:40:99:0,108,988	0/0:22,0:22:57.02:0,57,522	1/1:4,23:27:66.20:762,66,0	1/1:3,23:26:60.01:689,60,0	1/1:1,18:19:54.16:623,54,0	1/1:2,17:19:45.13:519,45,0	1/1:2,28:30:84.24:963,84,0	0/0:31,0:31:90.05:0,90,824	1/1:0,7:7:21.06:242,21,0
chr10	32532329	.	C	CCT	6358.84	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-15.505;DP=632;FS=9.868;HRun=0;HaplotypeScore=84.1120;InbreedingCoeff=0.9991;MQ=85.86;MQ0=0;MQRankSum=-3.421;QD=38.77;ReadPosRankSum=-1.278;VQSLOD=6.2464;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,22:27:60.21:1028,60,0	0/0:12,0:12:36.09:0,36,455	0/0:25,0:25:63.19:0,63,797	0/0:23,0:23:54.59:0,55,663	0/0:28,0:28:69.20:0,69,877	0/0:24,0:24:66.20:0,66,851	0/0:19,0:19:51.15:0,51,655	1/1:8,39:48:99:1974,120,0	0/0:25,0:25:66.21:0,66,867	0/0:24,0:24:57.18:0,57,738	0/0:22,0:22:63.19:0,63,813	0/0:22,0:22:63.18:0,63,799	0/0:29,0:29:72.23:0,72,946	0/0:20,0:20:60.18:0,60,773	0/0:22,0:22:57.19:0,57,748	0/0:20,0:20:51.17:0,51,670	0/0:22,0:22:60.20:0,60,788	0/0:11,0:11:23.99:0,24,276	1/1:6,20:27:63.17:1000,63,0	1/1:1,21:23:54.18:921,54,0	1/1:1,17:20:45.15:772,45,0	0/0:23,0:23:63.20:0,63,827	0/0:26,0:26:66.21:0,66,867	0/0:12,0:12:33.09:0,33,417	0/0:21,0:21:60.16:0,60,759	0/0:30,0:30:78.23:0,78,999	1/1:2,16:19:39.13:663,39,0	0/0:8,0:8:24.02:0,24,295
chr10	32532871	.	GA	G	877.08	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.745;DP=690;FS=2.567;HRun=4;HaplotypeScore=224.6536;InbreedingCoeff=0.9580;MQ=82.93;MQ0=0;MQRankSum=0.293;QD=32.48;ReadPosRankSum=1.381;VQSLOD=1.6136;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,126,1747	0/0:11,0:11:27.09:0,27,378	0/0:21,0:21:60.20:0,60,830	0/0:22,0:22:57.19:0,57,783	0/0:26,0:26:75.21:0,75,1027	0/0:27,0:27:81.25:0,81,1101	0/0:23,0:23:66.22:0,66,924	0/0:29,0:29:84.27:0,84,1156	0/0:33,0:33:99:0,99,1345	0/0:28,0:28:77.78:0,78,1072	0/0:29,0:29:81.26:0,81,1114	0/0:21,0:21:53.80:0,54,755	0/0:25,0:25:75.21:0,75,1027	0/0:27,0:27:81.27:0,81,1134	1/1:0,27:27:81.25:972,81,0	0/0:24,0:24:72.23:0,72,994	0/0:24,0:24:69.16:0,69,922	0/0:8,0:8:21.07:0,21,294	0/0:11,0:11:18.05:0,18,238	0/0:43,0:43:99:0,126,1744	0/0:15,0:15:36.12:0,36,504	0/0:26,0:26:69.22:0,69,949	0/0:25,0:25:69.19:0,69,944	0/0:26,0:26:66.22:0,66,924	0/0:29,0:29:87.24:0,87,1180	0/0:28,0:28:81.23:0,81,1112	0/0:29,0:29:84.28:0,84,1176	0/0:6,0:6:12.04:0,12,168
chr10	32533331	.	C	CT	5147.97	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-15.152;DP=521;FS=30.725;HRun=7;HaplotypeScore=45.8626;InbreedingCoeff=0.9820;MQ=69.99;MQ0=0;MQRankSum=0.768;QD=30.28;ReadPosRankSum=-1.672;VQSLOD=2.5006;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,25:28:63.19:761,63,0	0/0:8,0:8:24.04:0,24,232	0/0:6,0:7:13.83:0,14,121	0/0:7,0:6:9.01:0,9,87	0/0:26,0:26:75.11:0,75,718	0/0:28,0:28:72.10:0,72,689	0/0:9,0:9:21.03:0,21,203	1/1:3,37:41:99:1343,114,0	0/0:9,0:9:24.04:0,24,232	0/0:29,0:29:72.11:0,72,695	0/0:14,0:14:30.04:0,30,290	0/0:18,0:18:54.05:0,54,505	0/0:19,0:19:45.06:0,45,435	0/0:24,0:24:57.08:0,57,550	0/0:20,0:20:57.09:0,57,550	0/0:14,0:14:39.04:0,39,366	0/0:18,0:17:39.06:0,39,377	0/0:21,0:21:54.03:0,54,512	1/1:6,15:20:45.14:544,45,0	1/1:3,24:27:69.21:834,69,0	1/1:4,13:17:36.11:435,36,0	0/0:11,0:11:30.05:0,30,290	0/0:14,0:14:39.06:0,39,377	0/0:14,0:14:42.07:0,42,406	0/0:15,0:15:45.07:0,45,435	0/0:15,0:15:36.06:0,36,348	1/1:0,36:36:99:1232,102,0	0/0:11,0:11:30.05:0,30,289
chr10	32533872	.	TA	T	10319.11	PASS	AB=1.000;AC=53;AF=0.946;AN=56;BaseQRankSum=0.005;DP=507;FS=1.575;HRun=10;HaplotypeScore=92.1121;InbreedingCoeff=0.7613;MQ=71.43;MQ0=0;MQRankSum=-2.792;QD=20.76;ReadPosRankSum=2.298;VQSLOD=5.4856;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,17:17:41.99:365,42,0	1/1:1,10:11:29.99:260,30,0	0/0:10,0:10:15.04:0,15,163	0/1:5,0:5:1.97:8,0,2	1/1:2,23:26:65.01:553,65,0	1/1:2,21:23:56.98:495,57,0	1/1:0,7:7:21:182,21,0	1/1:11,26:37:77.93:669,78,0	1/1:0,18:18:50.99:443,51,0	1/1:0,20:20:59.99:521,60,0	1/1:1,25:26:65.97:573,66,0	1/1:0,15:15:44.99:391,45,0	1/1:0,20:20:38.99:339,39,0	1/1:1,10:11:29.99:260,30,0	1/1:3,0:17:22.40:66,22,0	1/1:1,17:18:44.99:391,45,0	1/1:1,16:17:44.99:391,45,0	1/1:1,9:10:26.99:234,27,0	1/1:4,14:18:41.99:364,42,0	1/1:4,21:25:62.97:547,63,0	1/1:3,14:17:38.99:339,39,0	1/1:1,14:15:41.99:365,42,0	1/1:4,21:26:52.95:449,53,0	1/1:2,7:9:20.99:182,21,0	1/1:1,17:18:50.99:443,51,0	1/1:6,26:32:80.01:683,80,0	1/1:1,23:24:53.99:469,54,0	1/1:2,13:15:38.97:339,39,0
chr10	32538034	.	CAA	C	2044.54	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=9.129;DP=653;FS=11.797;HRun=10;HaplotypeScore=78.7354;InbreedingCoeff=0.9784;MQ=54.37;MQ0=5;MQRankSum=-11.647;QD=15.73;ReadPosRankSum=-1.876;VQSLOD=0.5719;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,12:13:15.03:167,15,0	0/0:8,0:8:21.07:0,21,331	0/0:15,0:6:14.54:0,15,185	0/0:10,1:4:9.03:0,9,142	0/0:35,0:37:89.70:0,90,1304	0/0:35,0:36:89.78:0,90,1368	0/0:22,0:22:51.17:0,51,801	1/1:6,19:24:54.13:602,54,0	0/0:34,0:34:78.23:0,78,1171	0/0:28,0:28:72.25:0,72,1143	0/0:20,0:20:54.18:0,54,857	0/0:26,0:27:66.22:0,66,1025	0/0:24,0:26:74.19:0,74,1068	0/0:24,0:24:66.22:0,66,1034	0/0:6,0:31:59.68:0,60,206	0/0:27,0:28:80.72:0,81,1181	0/0:27,0:26:63.17:0,63,972	0/0:17,0:17:51.17:0,51,810	1/1:8,11:14:27:359,27,0	1/1:0,30:26:39.05:434,39,0	1/1:1,11:12:18.03:201,18,0	0/0:23,0:22:54.18:0,54,856	0/0:23,0:23:63.21:0,63,1000	0/0:14,1:13:27.09:0,27,427	0/0:26,0:26:57.19:0,57,905	0/0:33,0:34:89.78:0,90,1353	1/1:2,28:29:42.08:468,42,0	0/0:9,0:9:27.09:0,27,429
chr10	32538870	.	T	TA	10727.74	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-4.092;DP=368;FS=5.867;HRun=6;HaplotypeScore=30.7210;InbreedingCoeff=0.7808;MQ=60.88;MQ0=2;MQRankSum=1.473;QD=30.22;ReadPosRankSum=3.101;VQSLOD=4.8161;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,17:17:42.13:528,42,0	1/1:0,7:7:15.05:189,15,0	0/0:10,0:7:11.32:0,11,132	0/0:3,0:2:6.01:0,6,61	1/1:3,25:28:75.11:882,75,0	1/1:2,15:17:45.14:566,45,0	1/1:2,5:7:12.04:151,12,0	1/1:2,25:26:72.23:904,72,0	1/1:3,6:9:12.04:151,12,0	1/1:0,13:13:39.12:490,39,0	1/1:1,8:9:21.07:260,21,0	1/1:1,5:6:12.04:151,12,0	1/1:0,6:6:15.05:189,15,0	1/1:0,8:8:18.06:226,18,0	1/1:2,10:12:30.10:377,30,0	1/1:2,5:7:15.05:189,15,0	1/1:1,23:24:69.22:868,69,0	1/1:4,12:16:38.15:455,38,0	1/1:3,10:13:30.10:377,30,0	1/1:2,18:20:51.16:641,51,0	1/1:1,6:7:15.05:189,15,0	1/1:3,3:6:9.03:113,9,0	1/1:1,8:9:24.08:302,24,0	1/1:0,6:6:12.04:151,12,0	1/1:2,31:33:81.26:1019,81,0	1/1:0,17:17:48.15:604,48,0	1/1:3,20:23:51.16:642,51,0	1/1:3,5:8:9.03:113,9,0
chr10	32538985	.	ATGTGTGTGTG	A	1867.04	PASS	AB=0.834;AC=26;AF=0.542;AN=48;BaseQRankSum=4.507;DP=419;FS=22.415;HRun=0;HaplotypeScore=122.3812;InbreedingCoeff=0.4954;MQ=62.81;MQ0=9;MQRankSum=-4.179;QD=11.82;ReadPosRankSum=1.123;VQSLOD=0.6867;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:22:21.07:0,21,894	1/1:5,3:8:5.93:106,6,0	./.	0/0:19,0:13:6.02:0,6,83	0/0:15,9:25:0:0,0,0	1/1:8,6:14:6.02:177,6,0	1/1:1,4:5:3.01:89,3,0	0/0:32,0:30:21.03:0,21,549	1/1:8,6:14:9.03:266,9,0	1/1:17,2:19:5.98:109,6,0	./.	1/1:2,1:3:3.01:89,3,0	1/1:8,4:12:14.92:357,15,0	1/1:9,4:13:12.04:355,12,0	0/0:4,0:8:7.98:0,8,62	1/1:10,3:13:3.01:89,3,0	./.	./.	0/0:19,0:18:9.02:0,9,214	0/0:13,0:13:6.02:0,6,192	0/0:17,0:17:33.11:0,33,1364	1/1:4,3:7:0.62:2,1,0	0/0:9,2:11:0:0,0,0	1/1:8,0:8:2.98:22,3,0	1/1:10,5:16:6.02:118,6,0	0/1:13,2:15:40.83:81,0,41	0/0:12,0:13:24.08:0,24,989	0/1:8,3:10:76.56:165,0,77
chr10	32540215	.	C	CATCT	7361.13	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-14.106;DP=586;FS=3.054;HRun=0;HaplotypeScore=119.8561;InbreedingCoeff=0.9976;MQ=89.31;MQ0=0;MQRankSum=-2.619;QD=59.85;ReadPosRankSum=1.345;VQSLOD=6.7960;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,27:29:72.25:1869,72,0	0/0:11,0:11:30.10:0,30,539	0/0:23,0:23:54.18:0,54,891	0/0:22,0:22:45.15:0,45,784	0/0:30,0:30:87.29:0,87,1523	0/0:18,0:18:51.16:0,51,878	0/0:16,0:16:42.14:0,42,734	1/1:7,13:22:48.15:1143,48,0	0/0:26,0:26:75.26:0,75,1343	0/0:29,0:29:81.27:0,81,1405	0/0:21,0:21:60.18:0,60,1013	0/0:23,0:23:63.22:0,63,1122	0/0:26,0:26:72.24:0,72,1260	0/0:20,0:20:57.20:0,57,1024	0/0:21,0:21:60.21:0,60,1079	0/0:22,0:22:60.21:0,60,1069	0/0:32,0:32:78.27:0,78,1385	0/0:21,0:21:57.20:0,57,1018	1/1:2,6:8:18.06:467,18,0	1/1:2,11:13:30.10:773,30,0	1/1:0,28:30:69.22:1784,69,0	0/0:10,0:10:24.08:0,24,431	0/0:11,0:11:30.10:0,30,533	0/0:32,0:32:90.31:0,90,1617	0/0:20,0:20:51.17:0,51,916	0/0:16,0:16:48.16:0,48,833	1/1:3,17:21:51.18:1324,51,0	0/0:13,0:13:39.13:0,39,701
chr10	32541801	.	C	CAA	5400.77	PASS	AB=0.635;AC=43;AF=0.768;AN=56;BaseQRankSum=-1.706;DP=508;FS=16.012;HRun=13;HaplotypeScore=84.3301;InbreedingCoeff=0.1096;MQ=80.80;MQ0=1;MQRankSum=-2.759;QD=11.82;ReadPosRankSum=2.248;VQSLOD=2.0269;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,2:30:3.21:176,3,0	0/1:4,0:7:12.45:12,0,39	0/0:23,0:16:14.32:0,14,99	0/0:26,0:18:13.09:0,13,81	1/1:11,11:23:39.48:470,39,0	1/1:5,11:19:25.90:278,26,0	1/1:4,5:9:12.01:142,12,0	0/1:12,1:30:14.45:148,0,14	1/1:3,15:19:27.02:319,27,0	0/1:8,0:22:2.14:81,0,2	0/1:9,1:19:35.98:36,0,60	1/1:1,6:8:9.02:109,9,0	1/1:0,8:8:11.53:131,12,0	1/1:5,9:17:19.36:214,19,0	1/1:2,9:14:21.05:245,21,0	1/1:2,9:12:20.99:246,21,0	1/1:4,13:16:24.08:325,24,0	0/1:5,7:12:11.39:148,0,11	1/1:3,0:7:13.44:70,13,0	0/1:11,1:23:27.26:104,0,27	0/1:4,1:14:12.46:62,0,12	0/1:7,1:17:1.47:137,0,1	1/1:2,12:18:25.95:294,26,0	1/1:5,7:16:34.41:340,34,0	1/1:5,19:28:49.56:559,50,0	1/1:5,9:23:34.48:424,34,0	0/1:10,0:31:36.33:87,0,36	1/1:3,8:11:18.06:243,18,0
chr10	32542640	.	AT	A	8462.72	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=10.845;DP=503;FS=11.131;HRun=9;HaplotypeScore=52.1413;InbreedingCoeff=0.9518;MQ=77.15;MQ0=0;MQRankSum=-1.282;QD=23.38;ReadPosRankSum=3.387;VQSLOD=5.1262;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:51.12:0,51,567	1/1:0,8:8:21.01:192,21,0	0/0:13,1:14:0.18:0,0,182	0/0:9,0:9:19.30:0,19,203	1/1:3,37:40:99:986,108,0	1/1:2,15:17:42.02:384,42,0	1/1:2,8:10:24.01:220,24,0	0/0:32,0:32:72.20:0,72,823	1/1:1,19:20:54.03:494,54,0	1/1:3,23:26:69.02:627,69,0	1/1:1,14:15:39.02:356,39,0	1/1:0,20:20:60.03:549,60,0	1/1:1,14:15:39.02:357,39,0	1/1:2,21:23:57.03:522,57,0	1/1:2,16:18:33.01:302,33,0	1/1:1,10:11:24.01:220,24,0	1/1:4,21:25:57.03:522,57,0	1/1:0,6:6:18.01:165,18,0	0/0:15,0:15:39.12:0,39,450	0/0:22,0:22:60.18:0,60,692	0/0:12,0:12:30.06:0,30,327	1/1:0,17:17:48.02:439,48,0	1/1:3,18:21:48.02:439,48,0	1/1:0,13:13:36.02:330,36,0	1/1:5,20:25:25.41:487,25,0	1/1:0,24:24:72.01:651,72,0	0/0:20,0:19:51.15:0,51,583	1/1:0,8:8:24.01:220,24,0
chr10	32543317	.	C	CAT	10593.69	PASS	AB=0.589;AC=45;AF=0.833;AN=54;BaseQRankSum=-5.485;DP=384;FS=0.000;HRun=0;HaplotypeScore=70.5128;InbreedingCoeff=0.1392;MQ=74.31;MQ0=3;MQRankSum=-1.105;QD=30.01;ReadPosRankSum=1.715;VQSLOD=6.4319;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,22:32:14.04:748,14,0	1/1:6,4:11:23.95:288,24,0	0/0:8,0:6:6.93:0,7,25	0/0:22,1:15:0.38:0,0,64	0/1:6,14:20:41.29:410,0,41	1/1:3,10:13:24.08:389,24,0	1/1:0,8:8:24.08:394,24,0	1/1:9,24:33:41.04:1131,41,0	1/1:4,8:12:30.09:467,30,0	1/1:4,10:13:2.81:499,3,0	1/1:3,13:16:23.82:393,24,0	1/1:3,5:8:12.04:197,12,0	0/1:6,7:13:10.11:364,0,10	1/1:5,2:6:12.03:168,12,0	0/1:3,12:15:7.10:411,0,7	1/1:2,8:10:21.07:344,21,0	1/1:9,13:22:16.98:777,17,0	1/1:0,7:7:18.06:295,18,0	1/1:2,5:6:12.03:174,12,0	0/1:5,16:22:38.28:456,0,38	1/1:0,1:1:3.01:49,3,0	./.	1/1:4,6:10:21.07:343,21,0	1/1:1,3:4:9.03:148,9,0	1/1:5,13:18:32.73:541,33,0	1/1:6,16:22:54.17:829,54,0	0/1:7,17:23:57.40:681,0,57	1/1:0,2:2:6.02:98,6,0
chr10	32545194	.	ATATATTATAT	A	587.33	PASS	AB=1.000;AC=17;AF=0.607;AN=28;BaseQRankSum=2.866;DP=200;FS=7.991;HRun=0;HaplotypeScore=60.4913;InbreedingCoeff=0.4313;MQ=81.41;MQ0=3;MQRankSum=-1.165;QD=6.83;ReadPosRankSum=2.047;VQSLOD=0.4201;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:3,0:4:9.03:0,9,279	1/1:1,2:3:3.01:89,3,0	1/1:8,0:6:2.04:6,2,0	0/1:31,0:13:0.33:0,0,0	1/1:5,2:7:6.02:156,6,0	./.	./.	0/0:31,0:31:18.06:0,18,478	./.	1/1:9,1:10:3.01:89,3,0	1/1:5,1:6:3.01:89,3,0	./.	./.	1/1:5,1:6:3.01:88,3,0	./.	./.	1/1:10,2:12:2.14:87,2,0	0/0:13,0:13:1.25:0,1,3	./.	0/0:9,0:9:3.01:0,3,91	./.	./.	./.	./.	1/1:1,2:3:3.01:88,3,0	./.	0/0:11,0:12:6.02:0,6,142	./.
chr10	32545366	.	AC	A	1618.75	PASS	AB=0.911;AC=53;AF=0.946;AN=56;BaseQRankSum=-1.191;DP=294;FS=0.000;HRun=12;HaplotypeScore=36.9385;InbreedingCoeff=0.1385;MQ=80.73;MQ0=1;MQRankSum=-3.482;QD=5.51;ReadPosRankSum=1.894;VQSLOD=0.6336;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:12,5:21:15.71:101,16,0	1/1:6,0:7:10.97:73,11,0	0/1:18,0:16:2.13:2,0,121	0/1:5,0:5:2:2,0,21	1/1:5,4:14:20.31:138,20,0	1/1:6,8:14:5.95:46,6,0	1/1:2,3:7:13.04:81,13,0	1/1:12,8:21:12.18:78,12,0	1/1:3,1:4:2.97:23,3,0	1/1:5,1:8:10.03:58,10,0	1/1:6,0:7:4.94:23,5,0	1/1:3,1:5:5:29,5,0	1/1:4,0:6:4.86:20,5,0	1/1:11,1:16:18:110,18,0	1/1:2,0:9:14.03:41,14,0	0/1:7,2:11:11.49:80,0,11	1/1:2,7:14:23.07:140,23,0	1/1:1,1:4:5.02:29,5,0	1/1:9,0:9:2.95:23,3,0	1/1:4,5:10:13.97:99,14,0	1/1:6,1:10:12.84:76,13,0	1/1:5,4:8:8.94:70,9,0	1/1:6,2:9:5.96:46,6,0	1/1:3,1:5:2.02:6,2,0	1/1:6,8:15:13.95:97,14,0	1/1:6,1:11:7.97:52,8,0	1/1:14,1:16:19.83:135,20,0	1/1:3,5:8:5.95:46,6,0
chr10	32547062	.	TAA	T	1578.33	PASS	AB=0.991;AC=38;AF=0.679;AN=56;BaseQRankSum=12.024;DP=451;FS=7.658;HRun=4;HaplotypeScore=96.5552;InbreedingCoeff=0.5570;MQ=54.83;MQ0=23;MQRankSum=6.247;QD=4.95;ReadPosRankSum=3.222;VQSLOD=-0.5729;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:28:84.28:0,84,1494	1/1:7,0:6:2.73:15,3,0	0/0:1,0:1:3.01:0,3,54	0/1:4,0:3:4.45:4,0,61	1/1:30,2:33:50.77:254,51,0	1/1:11,1:10:12.35:93,12,0	1/1:15,2:16:5.85:96,6,0	0/0:28,0:23:63.19:0,63,1020	1/1:14,1:13:6.12:56,6,0	1/1:25,0:23:1.90:108,2,0	1/1:17,0:16:32.50:105,32,0	1/1:13,0:13:17.25:73,17,0	0/1:10,0:10:19.27:59,0,19	1/1:22,0:21:14.71:70,15,0	1/1:18,0:18:27.14:105,27,0	1/1:16,1:17:24.12:115,24,0	0/1:25,0:24:20.89:46,0,21	0/1:9,0:7:3.13:5,0,3	0/0:26,0:25:71.83:0,72,1238	0/0:18,0:18:54.18:0,54,959	0/0:10,0:9:24.08:0,24,435	1/1:7,1:8:16.33:89,16,0	1/1:9,2:12:20.04:153,20,0	1/1:10,1:11:0.84:69,1,0	1/1:15,0:15:28.61:114,29,0	1/1:20,1:19:8.11:122,8,0	0/0:16,0:16:45.12:0,45,761	1/1:7,0:6:5.55:15,6,0
chr10	32547430	.	G	GA	9829.53	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-8.115;DP=498;FS=19.973;HRun=8;HaplotypeScore=45.2787;InbreedingCoeff=0.9687;MQ=69.86;MQ0=0;MQRankSum=-3.515;QD=26.64;ReadPosRankSum=4.288;VQSLOD=3.2944;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:45.01:0,45,412	1/1:2,1:3:6.02:69,6,0	0/0:10,0:9:17.97:0,18,154	0/0:11,0:11:20.84:0,21,177	1/1:4,23:27:41.71:715,42,0	1/1:1,24:25:69.21:796,69,0	1/1:2,18:20:54.16:623,54,0	0/0:25,0:25:63.01:0,63,573	1/1:2,20:21:51.15:589,51,0	1/1:3,21:24:63.19:724,63,0	1/1:9,19:28:42.08:470,42,0	1/1:1,13:14:36.11:416,36,0	1/1:4,18:22:45.13:519,45,0	1/1:2,16:18:51.15:585,51,0	1/1:1,15:16:15.03:423,15,0	1/1:3,14:17:42.12:485,42,0	1/1:6,24:30:65:732,65,0	1/1:5,6:11:15.04:173,15,0	0/0:14,0:14:33.01:0,33,302	0/0:13,0:13:33.01:0,33,302	0/0:12,0:12:36:0,36,324	1/1:1,6:7:18.01:193,18,0	1/1:2,18:20:48.14:554,48,0	1/1:1,14:15:36.11:415,36,0	1/1:1,11:13:29.92:326,30,0	1/1:0,27:27:81.13:886,81,0	0/0:24,0:24:66.03:0,66,604	1/1:0,10:10:12.04:138,12,0
chr10	32547642	.	CT	C	928.66	PASS	AB=0.689;AC=12;AF=0.214;AN=56;BaseQRankSum=-7.853;DP=326;FS=7.753;HRun=13;HaplotypeScore=54.8557;InbreedingCoeff=0.5929;MQ=58.75;MQ0=27;MQRankSum=2.526;QD=9.10;ReadPosRankSum=3.036;VQSLOD=2.3234;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,9:11:17.86:131,18,0	0/0:2,0:3:4.55:0,5,32	1/1:10,1:8:5.75:39,6,0	0/0:6,0:3:0.47:0,0,1	0/0:10,0:9:7.57:0,8,32	0/0:12,0:14:28.14:0,28,155	0/0:5,0:7:15.58:0,16,80	1/1:8,14:23:43.50:303,43,0	0/0:7,0:15:15.25:0,15,88	0/0:5,0:7:8.99:0,9,44	0/0:13,0:17:30.78:0,31,162	0/0:6,0:7:14.47:0,14,82	0/0:6,0:6:11.10:0,11,64	0/0:9,0:7:14.34:0,14,79	0/0:6,0:13:14.42:0,14,81	0/0:4,0:6:10.01:0,10,51	0/0:20,0:22:19.37:0,19,130	0/0:3,0:4:5.68:0,6,29	0/1:9,3:8:17.28:54,0,17	0/1:3,8:11:24.73:107,0,25	1/1:4,8:12:12.47:161,12,0	0/0:6,0:8:5.23:0,5,28	0/0:11,0:12:15.11:0,15,75	0/0:4,0:7:8.52:0,9,43	0/0:5,0:9:6.62:0,7,30	0/0:8,0:13:29.23:0,29,162	1/1:1,15:16:41.72:302,42,0	0/0:2,0:3:8.64:0,9,48
chr10	32547727	.	T	TC	728.45	PASS	AB=1.000;AC=40;AF=0.952;AN=42;BaseQRankSum=0.813;DP=172;FS=13.802;HRun=8;HaplotypeScore=19.1216;InbreedingCoeff=0.0624;MQ=38.90;MQ0=56;MQRankSum=0.460;QD=4.96;ReadPosRankSum=-1.308;VQSLOD=-0.6814;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:10,2:9:8.98:89,9,0	1/1:5,0:1:2.74:12,3,0	./.	0/1:5,0:3:0.01:1,0,0	./.	1/1:4,0:2:2.74:12,3,0	./.	1/1:9,0:3:2.97:20,3,0	1/1:5,0:5:13.72:61,14,0	1/1:4,0:1:2.74:12,3,0	1/1:10,0:7:13.57:59,14,0	1/1:4,0:2:2.74:12,3,0	1/1:11,0:5:10.97:48,11,0	1/1:12,0:3:5.49:25,5,0	1/1:6,0:2:2.74:12,3,0	0/1:7,0:3:6.55:7,0,22	1/1:9,0:3:5.49:25,5,0	./.	1/1:8,4:8:21.02:227,21,0	1/1:0,1:1:3.01:34,3,0	./.	1/1:7,0:6:8.23:37,8,0	1/1:5,0:1:2.74:12,3,0	1/1:5,0:2:5.49:25,5,0	./.	1/1:5,0:4:10.98:49,11,0	1/1:7,1:2:3.01:35,3,0	./.
chr10	32549247	.	ATT	A	7598.14	PASS	AB=0.790;AC=40;AF=0.714;AN=56;BaseQRankSum=8.119;DP=491;FS=8.416;HRun=12;HaplotypeScore=82.2254;InbreedingCoeff=0.8011;MQ=73.88;MQ0=0;MQRankSum=-2.049;QD=22.22;ReadPosRankSum=4.625;VQSLOD=4.1337;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:19:44.40:0,44,537	1/1:1,9:10:24.05:244,24,0	0/0:12,0:12:11.40:0,11,84	0/1:17,0:15:8.89:9,0,174	1/1:4,21:25:48.61:515,49,0	1/1:0,24:26:50.59:623,51,0	1/1:1,6:7:12.02:122,12,0	0/0:28,0:28:57.15:0,57,790	1/1:0,16:16:42.10:427,42,0	1/1:3,13:16:39.07:397,39,0	1/1:2,18:20:48.09:488,48,0	1/1:3,8:11:24.03:244,24,0	1/1:3,17:21:50.84:500,51,0	1/1:1,12:14:7.01:332,7,0	0/1:5,0:18:14.53:15,0,105	1/1:0,8:9:14.77:205,15,0	1/1:1,13:14:36.07:366,36,0	1/1:1,8:9:18.03:183,18,0	0/0:16,0:18:44.11:0,44,579	0/0:26,0:28:81.22:0,81,1128	0/0:14,0:15:39.07:0,39,520	1/1:1,20:21:51.07:519,51,0	1/1:1,25:26:66.15:671,66,0	1/1:2,12:14:36.07:366,36,0	1/1:2,22:24:66.14:671,66,0	1/1:1,20:21:60.13:610,60,0	0/0:29,0:28:72.14:0,72,999	1/1:0,3:3:9.02:92,9,0
chr10	32551138	.	A	AC	22130.82	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-8.113;DP=605;FS=0.000;HRun=2;HaplotypeScore=66.3972;InbreedingCoeff=0.9990;MQ=82.81;MQ0=2;MQRankSum=-9.375;QD=39.45;ReadPosRankSum=5.148;VQSLOD=5.0265;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,32:34:90.30:1296,90,0	1/1:2,9:11:30.09:413,30,0	0/0:16,0:15:42.08:0,42,495	0/0:27,0:24:58.98:0,59,729	1/1:0,29:29:78.26:1122,78,0	1/1:2,8:10:27.05:365,27,0	1/1:2,26:28:72.24:1036,72,0	1/1:2,27:29:81.21:1105,81,0	1/1:1,19:20:60.20:862,60,0	1/1:0,21:21:63.21:907,63,0	1/1:1,22:23:63.21:898,63,0	1/1:2,27:29:78.26:1122,78,0	1/1:0,14:14:42.14:605,42,0	1/1:2,14:16:42.10:582,42,0	1/1:2,18:20:57.18:802,57,0	1/1:0,27:27:78.26:1123,78,0	1/1:0,17:17:51.17:733,51,0	1/1:3,11:14:39.13:555,39,0	1/1:0,20:20:60.18:844,60,0	1/1:2,24:26:63.17:884,63,0	1/1:1,22:23:60.16:841,60,0	1/1:0,21:21:60.20:863,60,0	1/1:2,19:21:54.12:733,54,0	1/1:1,17:18:54.14:754,54,0	1/1:0,22:22:66.22:944,66,0	1/1:0,31:31:93.29:1318,93,0	1/1:2,23:25:66.22:950,66,0	1/1:0,12:12:33.11:475,33,0
chr10	32551214	.	G	GAGAT	26148.23	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-11.954;DP=635;FS=0.325;HRun=0;HaplotypeScore=119.3151;InbreedingCoeff=0.9989;MQ=84.60;MQ0=0;MQRankSum=-5.465;QD=61.96;ReadPosRankSum=5.731;VQSLOD=6.7832;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:90.31:0,90,1667	1/1:1,7:9:24.06:582,24,0	0/0:22,0:22:62.69:0,63,1066	0/0:23,0:23:63.22:0,63,1129	1/1:3,17:22:42.14:1119,42,0	1/1:0,15:15:39.13:1039,39,0	1/1:4,8:12:27.09:678,27,0	0/0:23,0:23:51.15:0,51,846	1/1:2,23:25:72.23:1863,72,0	1/1:3,16:19:54.19:1436,54,0	1/1:5,16:21:45.13:1133,45,0	1/1:8,20:28:72.22:1807,72,0	1/1:4,16:20:51.18:1317,51,0	1/1:3,19:23:59.99:1533,60,0	1/1:5,36:41:99:2684,102,0	1/1:8,18:26:66.23:1718,66,0	1/1:6,18:24:51.16:1266,51,0	1/1:1,13:14:39.12:984,39,0	0/0:27,0:27:75.26:0,75,1399	0/0:25,0:25:66.23:0,66,1220	0/0:36,0:36:99:0,102,1903	1/1:3,16:20:51.18:1344,51,0	1/1:8,25:34:66.23:1757,66,0	1/1:10,14:24:54.15:1315,54,0	1/1:4,9:13:27.07:663,27,0	1/1:5,14:19:51.13:1270,51,0	0/0:25,0:24:69.21:0,69,1252	1/1:5,8:13:24.08:640,24,0
chr10	32551218	.	T	TA	2549.36	PASS	AB=0.989;AC=31;AF=0.554;AN=56;BaseQRankSum=16.461;DP=605;FS=0.998;HRun=1;HaplotypeScore=148.9269;InbreedingCoeff=0.3354;MQ=87.95;MQ0=0;MQRankSum=-5.079;QD=6.44;ReadPosRankSum=9.180;VQSLOD=-0.0906;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:93.31:0,93,1301	1/1:10,0:10:20.46:86,20,0	0/0:24,0:24:72.17:0,72,925	0/0:24,0:24:63.19:0,63,814	0/1:21,1:22:26.10:94,0,26	1/1:15,0:15:32.44:118,32,0	0/1:12,0:12:43.55:44,0,78	0/0:19,0:19:57.19:0,57,796	1/1:24,0:24:60.39:232,60,0	1/1:17,0:17:1.16:103,1,0	0/1:17,1:18:2.58:127,0,3	1/1:24,0:24:19.45:198,19,0	1/1:18,0:18:28.59:134,29,0	1/1:25,0:25:11.98:191,12,0	1/1:40,0:40:44.18:301,44,0	1/1:22,0:22:8.98:168,9,0	1/1:21,0:22:40.44:179,40,0	0/1:16,0:16:6:97,0,6	0/0:27,0:27:75.25:0,75,1049	0/0:24,0:24:69.23:0,69,965	0/0:35,0:35:99:0,102,1427	0/1:21,0:21:15.77:144,0,16	0/1:32,0:32:23.94:139,0,24	1/1:18,2:20:6.41:208,6,0	0/1:12,0:12:41.33:45,0,41	0/1:17,0:17:44.09:88,0,44	0/0:24,0:23:69.21:0,69,941	0/1:9,0:9:18.97:50,0,19
chr10	32551443	.	A	AGTGTGC	5860.60	PASS	AB=0.786;AC=38;AF=0.679;AN=56;BaseQRankSum=-0.622;DP=766;FS=6.631;HRun=0;HaplotypeScore=170.3365;InbreedingCoeff=0.7818;MQ=64.65;MQ0=15;MQRankSum=3.046;QD=11.40;ReadPosRankSum=2.236;VQSLOD=3.6850;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:53:83.59:0,84,680	1/1:13,0:13:26.71:249,27,0	0/0:26,0:19:51.01:0,51,489	0/0:25,0:16:25.78:0,26,264	1/1:10,17:29:2.22:7,2,0	1/1:8,12:20:7.75:149,8,0	1/1:25,0:25:9.03:141,9,0	0/0:43,0:41:99:0,100,880	1/1:27,2:29:47.91:799,48,0	1/1:28,0:28:62.63:571,63,0	1/1:16,0:16:18.68:228,19,0	1/1:25,0:25:36.46:328,36,0	1/1:7,23:33:13.71:296,14,0	1/1:10,21:33:8.72:170,9,0	0/1:27,0:34:43.80:440,0,44	1/1:20,3:22:17.94:542,18,0	1/1:24,1:25:7.98:67,8,0	1/1:15,0:13:8.99:136,9,0	0/0:15,0:15:38.71:0,39,309	0/0:17,0:21:44.97:0,45,412	0/0:37,0:38:62.11:0,62,489	1/1:25,0:24:38.95:416,39,0	0/1:8,20:29:0.11:0,0,1	1/1:47,1:47:11.37:246,11,0	1/1:2,19:21:3.01:104,3,0	1/1:6,18:27:63.03:779,63,0	0/0:27,0:29:71.75:0,72,617	1/1:11,0:10:23.81:192,24,0
chr10	32551445	.	T	TGTGC	5118.35	PASS	AB=0.948;AC=32;AF=0.571;AN=56;BaseQRankSum=0.348;DP=765;FS=13.181;HRun=0;HaplotypeScore=154.2559;InbreedingCoeff=0.4708;MQ=63.62;MQ0=15;MQRankSum=0.837;QD=9.96;ReadPosRankSum=3.746;VQSLOD=3.1471;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:52:83.70:0,84,667	1/1:13,0:13:26.53:267,27,0	0/0:25,0:18:51.01:0,51,489	0/0:25,0:16:25.84:0,26,265	1/1:28,1:28:0.30:13,0,0	0/1:22,0:21:10.34:118,0,10	1/1:3,21:24:8.98:239,9,0	0/0:43,0:41:99:0,103,892	1/1:29,0:29:47.89:594,48,0	1/1:0,27:29:62.63:595,63,0	0/1:16,0:16:2.15:172,0,2	1/1:27,0:27:39.24:333,39,0	0/1:31,0:31:6.14:179,0,6	0/1:31,0:31:12.16:104,0,12	0/1:34,0:34:4.09:417,0,4	1/1:7,15:23:18.06:409,18,0	1/1:3,22:25:8.73:113,9,0	1/1:5,11:14:9.02:161,9,0	0/0:16,0:16:38.76:0,39,311	0/0:21,0:21:44.97:0,45,407	0/0:38,0:38:62.94:0,63,500	0/1:23,0:22:3.91:345,0,4	0/1:33,0:30:0.12:0,0,0	0/1:14,32:46:26.42:202,0,26	1/1:21,0:21:3.01:60,3,0	1/1:29,0:29:14.86:604,15,0	0/0:28,0:28:71.56:0,72,584	1/1:11,0:10:23.81:192,24,0
chr10	32551447	.	T	TGC	3626.38	PASS	AB=0.983;AC=27;AF=0.482;AN=56;BaseQRankSum=1.326;DP=748;FS=22.227;HRun=0;HaplotypeScore=130.7662;InbreedingCoeff=0.2696;MQ=61.51;MQ0=17;MQRankSum=2.317;QD=7.75;ReadPosRankSum=6.403;VQSLOD=1.6799;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:51:83.41:0,83,652	1/1:14,0:14:12.37:173,12,0	0/0:24,0:17:51.01:0,51,489	0/0:23,0:14:25.91:0,26,265	0/1:28,1:28:1.65:48,0,2	0/1:21,1:21:20.31:20,0,61	1/1:25,0:25:8.95:105,9,0	0/0:43,0:40:99:0,108,919	1/1:29,0:29:44.73:382,45,0	1/1:25,0:25:53.22:418,53,0	0/1:17,0:17:3.24:177,0,3	0/1:26,0:26:5.30:244,0,5	0/1:28,1:29:21.17:147,0,21	0/1:32,1:33:16.49:65,0,16	1/1:33,0:33:30.01:457,30,0	1/1:23,0:22:17.82:206,18,0	1/1:21,1:22:8.76:101,9,0	0/1:15,0:12:27.95:51,0,28	0/0:14,0:14:38.80:0,39,314	0/0:20,0:20:44.93:0,45,388	0/0:40,0:40:63.08:0,63,502	0/1:22,0:21:3.99:297,0,4	0/0:32,1:30:5.98:0,6,50	0/1:43,2:44:45.82:159,0,46	0/1:21,0:21:25.19:25,0,41	0/1:27,0:27:70.99:357,0,71	0/0:29,0:29:66.57:0,67,542	1/1:11,0:10:23.81:192,24,0
chr10	32551498	.	A	AG	603.64	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=0.102;DP=584;FS=0.840;HRun=7;HaplotypeScore=131.5585;InbreedingCoeff=0.9242;MQ=77.93;MQ0=4;MQRankSum=-1.832;QD=22.36;ReadPosRankSum=-2.217;VQSLOD=1.5254;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:89.98:0,90,867	0/0:7,0:7:11.86:0,12,116	0/0:39,0:29:73.64:0,74,717	0/0:39,0:33:82.24:0,82,829	0/0:21,0:21:22.65:0,23,253	0/0:18,0:18:39.06:0,39,377	0/0:22,0:22:50.81:0,51,486	0/0:25,0:25:60.06:0,60,567	0/0:19,0:19:28.71:0,29,286	0/0:10,0:10:24:0,24,224	0/0:15,0:15:32.85:0,33,318	0/0:14,0:14:35.57:0,36,346	0/0:19,0:19:38.89:0,39,370	0/0:23,0:23:50.62:0,51,486	1/1:6,21:26:59.77:698,60,0	0/0:20,0:18:18.69:0,19,199	0/0:17,0:17:35.19:0,35,346	0/0:13,0:12:30.04:0,30,290	0/0:20,0:20:47.92:0,48,442	0/0:14,0:14:24.03:0,24,230	0/0:34,0:34:63.07:0,63,602	0/0:18,0:17:32.32:0,32,313	0/0:22,0:22:24.03:0,24,232	0/0:34,0:33:63.01:0,63,608	0/0:13,0:13:30.04:0,30,290	0/0:19,0:19:48.07:0,48,464	0/0:12,0:12:30.04:0,30,289	0/0:4,0:4:12.02:0,12,116
chr10	32552013	.	AGCAGAAAG	A	995.74	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.711;DP=575;FS=5.836;HRun=0;HaplotypeScore=139.6387;InbreedingCoeff=0.9800;MQ=64.36;MQ0=4;MQRankSum=-6.108;QD=55.32;ReadPosRankSum=1.704;VQSLOD=2.9156;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:87.30:0,87,3584	0/0:7,0:7:21.07:0,21,865	0/0:21,0:17:42.14:0,42,1533	0/0:24,0:21:51.14:0,51,1733	0/0:20,0:20:60.21:0,60,2629	0/0:14,0:14:39.13:0,39,1715	0/0:22,0:22:63.22:0,63,2652	0/0:30,0:30:87.27:0,87,3335	0/0:20,0:20:54.19:0,54,2365	0/0:27,0:27:75.26:0,75,3218	0/0:12,0:12:33.11:0,33,1451	0/0:12,0:12:36.12:0,36,1509	0/0:20,0:20:57.16:0,57,2289	0/0:17,0:17:48.16:0,48,1882	1/1:2,16:18:39.13:1091,39,0	0/0:15,0:15:42.14:0,42,1761	0/0:33,0:33:90.31:0,90,3952	0/0:22,0:22:60.14:0,60,2118	0/0:17,0:15:45.15:0,45,1836	0/0:17,0:17:51.18:0,51,1977	0/0:34,0:34:96.33:0,96,4026	0/0:15,0:15:45.15:0,45,1920	0/0:26,0:26:78.27:0,78,3304	0/0:21,0:21:60.21:0,60,2487	0/0:23,0:23:69.24:0,69,2973	0/0:22,0:22:63.22:0,63,2637	0/0:30,0:30:81.28:0,81,3405	0/0:5,0:5:15.05:0,15,659
chr10	32553821	.	TG	T	7628.22	PASS	AB=1.000;AC=54;AF=0.964;AN=56;BaseQRankSum=-4.061;DP=619;FS=13.514;HRun=11;HaplotypeScore=89.5671;InbreedingCoeff=0.1949;MQ=67.38;MQ0=2;MQRankSum=-2.454;QD=12.32;ReadPosRankSum=4.481;VQSLOD=3.1067;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:42:73.32:212,73,0	1/1:0,7:7:17.97:145,18,0	0/1:12,0:11:5.61:6,0,157	0/1:17,0:17:10.52:11,0,98	1/1:8,23:33:72.75:549,73,0	1/1:0,17:18:49.98:400,50,0	1/1:4,15:19:35.95:296,36,0	1/1:5,0:22:33.85:101,34,0	1/1:6,15:22:34.99:277,35,0	1/1:4,17:22:52.93:418,53,0	1/1:5,21:26:62.92:517,63,0	1/1:5,12:18:6:245,6,0	1/1:5,12:17:35.95:296,36,0	1/1:3,12:16:36.79:282,37,0	1/1:3,0:29:50.92:147,51,0	1/1:5,21:27:58.96:474,59,0	1/1:6,26:32:71.91:591,72,0	1/1:0,13:13:38.96:320,39,0	1/1:1,0:10:17.64:52,18,0	1/1:6,1:33:54.38:172,54,0	1/1:9,0:30:32.56:94,33,0	1/1:3,21:24:53.89:437,54,0	1/1:5,16:21:41.92:345,42,0	1/1:3,20:23:18.71:349,19,0	1/1:8,19:27:44.91:369,45,0	1/1:6,10:16:29.94:246,30,0	1/1:2,0:29:44.81:130,45,0	1/1:1,10:11:17.98:148,18,0
chr10	32554783	.	GTACATAAA	G	2530.18	PASS	AB=1.000;AC=26;AF=0.464;AN=56;BaseQRankSum=-16.717;DP=539;FS=2.098;HRun=0;HaplotypeScore=207.4229;InbreedingCoeff=-0.7446;MQ=54.43;MQ0=8;MQRankSum=3.729;QD=4.99;ReadPosRankSum=-1.394;VQSLOD=2.6750;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:30:65.82:66,0,993	0/1:6,0:6:12.96:13,0,220	0/0:11,0:3:5.98:0,6,53	0/0:7,0:4:8.94:0,9,83	0/1:31,0:31:99:113,0,1197	0/1:25,0:25:99:169,0,848	0/1:14,0:14:99:152,0,206	0/1:34,0:34:99:311,0,536	0/1:16,0:16:51.85:52,0,767	0/1:27,0:27:54.73:55,0,1466	0/1:22,0:22:54.78:55,0,1152	0/1:13,0:13:99:115,0,431	0/1:25,0:25:78.76:79,0,1246	0/1:13,0:13:88.89:89,0,417	1/1:3,9:12:15.05:398,15,0	0/1:18,0:18:46.83:47,0,822	0/1:27,0:27:99:139,0,831	0/1:7,0:7:26.99:27,0,60	0/1:16,0:14:99:120,0,328	0/1:20,0:20:65.99:66,0,886	0/1:10,0:10:34.92:35,0,153	0/1:20,0:20:99:111,0,589	0/1:33,0:33:99:127,0,1230	0/1:15,0:15:84.86:85,0,529	0/1:19,0:19:99:153,0,556	0/1:28,0:27:67.75:68,0,1186	0/1:25,0:26:44.83:45,0,1319	0/0:14,0:14:14.11:0,14,689
chr10	32554789	.	A	AC	2768.03	PASS	AB=0.775;AC=21;AF=0.375;AN=56;BaseQRankSum=13.641;DP=526;FS=1.956;HRun=0;HaplotypeScore=136.4144;InbreedingCoeff=-0.5831;MQ=54.22;MQ0=8;MQRankSum=7.051;QD=6.47;ReadPosRankSum=9.741;VQSLOD=2.9309;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:23,5:28:16.81:17,0,146	0/1:5,1:6:2.26:47,0,2	0/0:10,0:2:6.02:0,6,84	0/0:7,0:3:9.03:0,9,125	0/1:18,9:27:99:166,0,114	0/1:22,5:27:95.86:96,0,138	0/0:15,1:16:26.75:0,27,177	0/0:31,0:31:54.14:0,54,396	0/1:11,6:17:50.57:118,0,51	0/1:14,11:25:38.63:284,0,39	0/1:18,6:24:73.09:196,0,73	0/1:11,3:14:58.85:86,0,59	0/1:11,13:24:33.16:241,0,33	0/1:10,4:14:25.52:26,0,106	0/0:9,0:9:11.60:0,12,43	0/1:11,7:18:22.04:200,0,22	0/1:21,6:27:98.66:196,0,99	0/0:10,0:10:12.81:0,13,72	0/0:13,2:13:5.46:0,5,127	0/1:13,7:20:51.17:104,0,51	0/1:7,1:8:8.29:8,0,34	0/1:12,7:19:78.88:145,0,79	0/1:18,12:30:83.49:227,0,83	0/1:12,3:15:63.93:87,0,64	0/1:14,4:18:83.63:121,0,84	0/1:17,10:26:59.87:283,0,60	0/1:18,8:26:99:116,0,106	0/1:9,5:14:20.34:161,0,20
chr10	32554790	.	A	ATAC	8951.08	PASS	AB=0.797;AC=24;AF=0.429;AN=56;BaseQRankSum=12.991;DP=529;FS=13.185;HRun=0;HaplotypeScore=134.7057;InbreedingCoeff=-0.7503;MQ=54.22;MQ0=9;MQRankSum=1.458;QD=18.96;ReadPosRankSum=7.359;VQSLOD=3.3649;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:23,5:28:99:244,0,183	0/1:5,1:6:5.87:138,0,6	0/0:10,0:2:6.02:0,6,86	0/0:7,0:3:9.03:0,9,127	0/1:17,9:26:99:515,0,132	0/1:22,5:27:99:387,0,186	0/1:15,1:16:53.72:54,0,158	0/0:31,0:31:54.88:0,55,574	0/1:12,6:18:35.44:437,0,35	0/1:13,11:24:99:648,0,105	0/1:19,6:25:86.32:506,0,86	0/1:10,3:13:69.92:222,0,70	0/1:11,12:24:55.13:689,0,55	0/1:10,4:14:99:151,0,137	0/0:9,0:9:14.95:0,15,118	0/1:12,7:19:31.39:558,0,31	0/1:21,6:27:99:479,0,150	0/1:10,0:10:54.01:67,0,54	0/1:14,2:13:67.10:67,0,143	0/1:13,7:20:49.30:466,0,49	0/1:7,1:8:35.42:35,0,52	0/1:12,7:19:99:351,0,130	0/1:19,12:31:99:640,0,150	0/1:12,3:15:90.18:266,0,90	0/1:14,4:18:99:352,0,130	0/1:17,10:26:93.67:726,0,94	0/1:18,8:26:99:532,0,107	0/1:10,5:15:25.79:421,0,26
chr10	32554834	.	GT	G	3612.49	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-1.387;DP=518;FS=9.800;HRun=7;HaplotypeScore=133.4267;InbreedingCoeff=0.9967;MQ=69.16;MQ0=0;MQRankSum=-1.691;QD=27.79;ReadPosRankSum=-1.197;VQSLOD=1.7343;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,24:25:66.14:673,66,0	0/0:7,0:7:18.06:0,18,226	0/0:16,0:15:30.08:0,30,365	0/0:10,0:8:24.03:0,24,278	0/0:27,0:27:69.22:0,69,867	0/0:19,0:19:51.16:0,51,642	0/0:8,0:8:24.08:0,24,300	1/1:1,20:21:60.08:595,60,0	0/0:19,0:19:57.17:0,57,704	0/0:22,0:22:66.21:0,66,830	0/0:23,0:23:66.20:0,66,818	0/0:16,0:16:48.15:0,48,593	0/0:21,0:21:51.13:0,51,625	0/0:10,0:10:24.05:0,24,277	0/0:19,0:19:42.12:0,42,513	0/0:19,0:19:54.17:0,54,679	0/0:24,0:24:72.21:0,72,892	0/0:14,0:14:42.13:0,42,528	1/1:0,14:14:36.08:367,36,0	1/1:2,25:27:72.16:734,72,0	1/1:1,9:10:27.02:264,27,0	0/0:17,0:17:45.14:0,45,566	0/0:28,0:28:75.22:0,75,915	0/0:11,0:11:30.10:0,30,377	0/0:18,0:18:51.16:0,51,631	0/0:21,0:21:60.19:0,60,755	1/1:2,31:33:96.21:979,96,0	0/0:19,0:19:57.18:0,57,717
chr10	32555168	.	AAAGG	A	3991.70	PASS	AB=0.923;AC=35;AF=0.673;AN=52;BaseQRankSum=3.435;DP=561;FS=16.135;HRun=0;HaplotypeScore=110.7195;InbreedingCoeff=0.7845;MQ=62.14;MQ0=6;MQRankSum=1.301;QD=11.95;ReadPosRankSum=3.503;VQSLOD=2.0046;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:28.77:0,29,614	1/1:5,0:5:6.02:84,6,0	./.	./.	1/1:20,0:20:20.81:193,21,0	1/1:18,0:17:19.29:246,19,0	1/1:20,0:20:17.94:187,18,0	0/0:19,0:17:5.97:0,6,107	1/1:25,0:23:32.94:387,33,0	1/1:20,0:20:12.02:134,12,0	1/1:15,0:15:14.96:147,15,0	1/1:14,1:15:20.92:249,21,0	1/1:19,0:18:30.07:355,30,0	1/1:22,0:19:18.82:194,19,0	0/0:31,0:29:21.75:0,22,134	1/1:25,0:21:32.99:392,33,0	1/1:12,9:21:3.01:45,3,0	0/1:11,1:11:7:123,0,7	0/0:19,0:14:22.26:0,22,288	0/0:27,0:27:51.12:0,51,704	0/0:22,0:19:39.12:0,39,649	1/1:13,0:13:14.90:130,15,0	0/0:22,0:22:0.89:0,1,2	1/1:29,0:27:32.70:363,33,0	1/1:23,0:22:15.15:362,15,0	1/1:25,0:21:33.01:356,33,0	0/0:29,0:25:41.91:0,42,530	1/1:3,0:3:3.01:44,3,0
chr10	32555195	.	GGAAGGAAGGAAAGAAGGAAA	G	6281.94	PASS	AB=1.000;AC=31;AF=0.596;AN=52;BaseQRankSum=-1.523;DP=555;FS=18.932;HRun=0;HaplotypeScore=178.3341;InbreedingCoeff=0.3307;MQ=40.98;MQ0=55;MQRankSum=1.696;QD=17.16;ReadPosRankSum=1.780;VQSLOD=2.5520;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:31:52.02:0,52,982	0/1:4,0:4:33.81:112,0,34	./.	./.	1/1:8,13:21:20.29:280,20,0	1/1:21,0:14:19.50:376,20,0	0/1:18,0:16:9.19:277,0,9	0/0:19,0:10:12.32:0,12,133	0/1:23,0:16:6.36:492,0,6	0/1:23,0:14:86.07:203,0,86	1/1:3,6:8:15.01:219,15,0	1/1:13,0:12:4.93:365,5,0	1/1:25,0:20:30.09:533,30,0	1/1:23,0:17:25.03:349,25,0	1/1:21,0:17:1.59:178,2,0	0/1:30,0:23:19.34:588,0,19	1/1:14,0:13:3.01:71,3,0	1/1:7,0:6:12.01:260,12,0	0/0:25,0:15:31.44:0,31,504	0/0:27,0:25:36.58:0,37,1053	0/0:30,0:22:44.63:0,45,1167	1/1:10,7:11:15.05:199,15,0	0/0:9,11:20:3.48:0,3,55	0/1:39,0:31:99:467,0,146	1/1:19,0:16:33.06:604,33,0	0/1:32,0:22:12.19:666,0,12	0/0:26,0:20:40.58:0,41,746	1/1:7,0:3:3.01:43,3,0
chr10	32555287	.	AGAAG	A	3069.86	PASS	AB=1.000;AC=36;AF=0.692;AN=52;BaseQRankSum=-3.971;DP=588;FS=17.295;HRun=0;HaplotypeScore=74.6388;InbreedingCoeff=0.4492;MQ=31.62;MQ0=174;MQRankSum=3.367;QD=7.89;ReadPosRankSum=0.743;VQSLOD=0.6622;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:24:2.39:0,2,24	1/1:5,0:4:5.81:48,6,0	./.	./.	1/1:15,0:8:17.98:242,18,0	1/1:16,0:6:4.57:49,5,0	1/1:22,0:12:27.01:326,27,0	0/0:56,0:27:5.86:0,6,35	1/1:28,0:16:26.10:330,26,0	1/1:17,10:15:17.96:205,18,0	1/1:9,0:5:3.01:45,3,0	1/1:16,0:10:17.96:216,18,0	1/1:17,0:7:8.84:78,9,0	1/1:31,0:16:26.69:340,27,0	0/0:14,0:7:7.98:0,8,33	1/1:18,0:10:12.30:117,12,0	1/1:19,0:12:17.29:192,17,0	1/1:8,0:4:6.01:74,6,0	0/0:22,0:14:3.34:0,3,18	0/0:23,0:19:5.46:0,5,48	0/0:40,0:22:11.81:0,12,72	1/1:16,0:3:6.02:90,6,0	1/1:7,0:5:6.02:90,6,0	0/1:36,0:15:12.60:225,0,13	0/1:23,0:15:3.89:286,0,4	1/1:36,0:14:11.53:139,12,0	0/1:22,0:16:1.47:1,0,27	0/1:18,0:11:10.80:137,0,11
chr10	32557264	.	TA	T	12694.74	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=8.231;DP=595;FS=3.135;HRun=2;HaplotypeScore=86.3134;InbreedingCoeff=0.9993;MQ=77.95;MQ0=0;MQRankSum=0.768;QD=35.86;ReadPosRankSum=4.540;VQSLOD=5.3629;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:87.29:0,87,1299	1/1:0,9:9:24.08:312,24,0	0/0:27,0:24:53.26:0,53,834	0/0:29,0:26:72.18:0,72,1033	1/1:1,21:22:60.13:758,60,0	1/1:1,23:24:66.21:857,66,0	1/1:0,21:21:51.17:662,51,0	0/0:30,0:30:90.29:0,90,1316	1/1:1,18:19:54.18:701,54,0	1/1:2,20:22:60.19:779,60,0	1/1:0,14:14:36.07:448,36,0	1/1:1,13:14:39.13:506,39,0	1/1:0,23:23:63.20:818,63,0	1/1:0,24:24:69.21:896,69,0	0/0:14,0:14:42.14:0,42,630	1/1:0,16:16:48.16:623,48,0	1/1:0,19:19:57.19:740,57,0	1/1:0,15:15:39.13:506,39,0	0/0:26,0:26:78.25:0,78,1132	0/0:27,0:27:78.24:0,78,1130	0/0:31,0:31:87.29:0,87,1302	1/1:0,18:18:54.18:701,54,0	1/1:0,15:15:42.14:545,42,0	1/1:0,23:23:60.20:779,60,0	1/1:0,26:26:75.24:974,75,0	1/1:1,20:21:60.19:779,60,0	0/0:26,0:26:78.23:0,78,1126	1/1:0,9:9:24.08:311,24,0
chr10	32558363	.	C	CA	14184.39	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-6.731;DP=763;FS=4.331;HRun=6;HaplotypeScore=117.1552;InbreedingCoeff=0.9983;MQ=49.97;MQ0=29;MQRankSum=-0.320;QD=28.14;ReadPosRankSum=1.843;VQSLOD=4.2358;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:33:62.57:0,63,859	1/1:1,15:16:33.11:415,33,0	0/0:32,0:12:35.98:0,36,352	0/0:24,0:10:27.06:0,27,275	1/1:7,20:25:51.12:624,51,0	1/1:3,27:30:60.19:755,60,0	1/1:0,20:20:51.16:639,51,0	0/0:36,0:32:78.15:0,78,790	1/1:3,21:24:63.20:792,63,0	1/1:6,21:23:63.20:790,63,0	1/1:2,18:19:45.10:548,45,0	1/1:1,21:22:51.13:625,51,0	1/1:4,28:32:66.17:812,66,0	1/1:2,26:26:69.18:850,69,0	1/1:3,26:27:63.20:791,63,0	1/1:3,23:25:63.20:792,63,0	1/1:4,26:30:57.18:717,57,0	1/1:4,18:21:45.12:550,45,0	0/0:19,0:15:33.08:0,33,337	0/0:40,0:40:99:0,111,1132	0/0:32,0:32:75.16:0,75,765	1/1:3,30:33:69.22:864,69,0	1/1:2,25:26:66.21:830,66,0	1/1:1,17:18:36.12:453,36,0	1/1:2,23:25:66.08:766,66,0	1/1:6,36:42:99:1345,108,0	0/0:42,0:40:99:0,102,1041	1/1:0,6:6:18.06:226,18,0
chr10	32559108	.	T	TAATA	18489.30	PASS	AB=0.706;AC=51;AF=0.911;AN=56;BaseQRankSum=-5.733;DP=341;FS=62.594;HRun=0;HaplotypeScore=47.8260;InbreedingCoeff=0.3422;MQ=58.28;MQ0=8;MQRankSum=-0.168;QD=55.19;ReadPosRankSum=0.644;VQSLOD=2.7204;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,15:18:13.92:956,14,0	1/1:2,5:7:18.05:415,18,0	0/1:10,0:4:6.62:7,0,39	0/0:6,0:4:8.45:0,8,81	1/1:3,8:13:24.08:605,24,0	1/1:3,13:15:36.12:930,36,0	1/1:3,9:11:23.49:692,23,0	1/1:5,13:17:45.15:933,45,0	1/1:4,10:13:24.08:620,24,0	0/1:3,7:10:1.75:593,0,2	1/1:2,13:16:36.12:840,36,0	1/1:2,9:13:30.10:764,30,0	1/1:0,10:11:27.09:688,27,0	1/1:2,11:14:33.11:847,33,0	1/1:5,9:13:36.12:808,36,0	1/1:1,7:8:21.07:543,21,0	1/1:4,10:14:20.23:879,20,0	1/1:1,5:8:9.03:232,9,0	1/1:2,10:12:30.10:728,30,0	1/1:1,11:14:36.12:924,36,0	1/1:0,12:12:27.09:691,27,0	1/1:2,4:6:15.05:380,15,0	1/1:3,10:13:39.13:918,39,0	1/1:1,7:9:21.07:536,21,0	1/1:1,13:13:36.12:924,36,0	0/1:2,16:18:23.40:1112,0,23	1/1:2,11:13:33.11:848,33,0	1/1:2,1:1:3.01:77,3,0
chr10	32559593	.	G	GCACACACACACA	4950.05	PASS	AB=0.773;AC=48;AF=0.960;AN=50;BaseQRankSum=-4.382;DP=575;FS=10.727;HRun=0;HaplotypeScore=188.2464;InbreedingCoeff=-0.1212;MQ=57.47;MQ0=19;MQRankSum=-1.370;QD=9.76;ReadPosRankSum=-2.052;VQSLOD=2.6754;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:22:5.59:95,6,0	1/1:6,0:11:5.99:113,6,0	./.	./.	1/1:19,0:16:9.03:165,9,0	1/1:15,0:14:5.63:99,6,0	1/1:20,0:29:3.82:147,4,0	1/1:21,0:21:18.19:335,18,0	1/1:14,0:19:12.04:243,12,0	1/1:23,0:17:12.03:196,12,0	1/1:11,0:10:3.01:74,3,0	1/1:7,0:17:9.03:229,9,0	0/1:8,0:19:7.04:102,0,7	1/1:16,0:15:12.04:248,12,0	1/1:6,0:13:3.01:154,3,0	1/1:9,0:15:15.05:382,15,0	1/1:10,5:18:6.02:204,6,0	1/1:6,0:6:7.26:68,7,0	1/1:11,0:17:20.57:372,21,0	1/1:13,0:23:7.65:167,8,0	0/1:32,0:34:51.12:242,0,51	1/1:12,0:18:3.13:76,3,0	1/1:27,0:26:23.64:456,24,0	1/1:22,0:33:0.79:73,1,0	1/1:17,0:30:10.31:263,10,0	1/1:17,0:16:15.05:297,15,0	1/1:17,0:23:8.67:150,9,0	./.
chr10	32560980	.	A	AT	9951.89	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-11.902;DP=565;FS=3.112;HRun=9;HaplotypeScore=58.5442;InbreedingCoeff=0.9899;MQ=78.81;MQ0=0;MQRankSum=-0.572;QD=26.05;ReadPosRankSum=2.726;VQSLOD=5.4817;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:53.99:0,54,468	1/1:0,10:10:27.07:299,27,0	0/0:17,0:18:25.95:0,26,205	0/0:10,0:9:11.07:0,11,147	1/1:1,15:16:41.99:422,42,0	1/1:3,26:29:63.17:697,63,0	1/1:3,16:19:45.12:498,45,0	0/0:25,0:25:59.96:0,60,516	1/1:1,16:17:46.01:499,46,0	1/1:2,25:28:75.13:788,75,0	1/1:4,22:26:57.08:604,57,0	1/1:1,15:16:39.11:431,39,0	1/1:2,20:22:48.12:523,48,0	1/1:3,16:19:48.13:531,48,0	1/1:1,21:22:63.17:697,63,0	1/1:3,18:23:53.81:559,54,0	1/1:0,12:12:33.09:365,33,0	1/1:1,7:8:15.04:166,15,0	0/0:23,0:22:62.98:0,63,547	0/0:36,0:36:86.90:0,87,749	0/0:18,0:19:53.03:0,53,449	1/1:2,18:20:48.13:531,48,0	1/1:2,17:19:42.11:465,42,0	1/1:3,12:15:27.07:299,27,0	1/1:4,21:25:31.10:571,31,0	1/1:3,22:25:69.15:740,69,0	0/0:33,0:33:72.48:0,72,780	1/1:3,8:11:24.06:265,24,0
chr10	32561496	.	AT	A	6186.76	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=12.290;DP=681;FS=0.325;HRun=2;HaplotypeScore=69.0748;InbreedingCoeff=0.9851;MQ=90.06;MQ0=0;MQRankSum=0.556;QD=35.15;ReadPosRankSum=2.008;VQSLOD=5.3117;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,34:35:96.27:1227,96,0	0/0:5,0:5:15.05:0,15,224	0/0:29,0:29:83.59:0,84,1044	0/0:24,0:24:50.39:0,50,821	0/0:43,0:43:99:0,129,1837	0/0:23,0:23:69.22:0,69,1008	0/0:22,0:22:63.21:0,63,942	1/1:0,18:18:54.16:687,54,0	0/0:16,0:16:48.16:0,48,716	0/0:33,0:33:99:0,99,1466	0/0:23,0:23:69.23:0,69,1034	0/0:22,0:22:66.22:0,66,972	0/0:26,0:26:78.26:0,78,1165	0/0:24,0:24:72.24:0,72,1059	0/0:23,0:23:69.22:0,69,1014	0/0:24,0:24:69.23:0,69,1033	0/0:18,0:18:51.17:0,51,764	0/0:24,0:24:63.13:0,63,881	1/1:1,22:23:66.14:807,66,0	1/1:2,29:31:69.22:896,69,0	1/1:0,31:31:90.29:1168,90,0	0/0:20,0:20:60.17:0,60,833	0/0:22,0:22:66.21:0,66,969	0/0:29,0:29:84.28:0,84,1254	0/0:21,0:21:63.18:0,63,904	0/0:31,0:31:90.28:0,90,1310	1/1:0,38:38:99:1401,108,0	0/0:3,0:3:9.03:0,9,135
chr10	32562018	.	GA	G	8808.88	PASS	AB=0.538;AC=51;AF=0.911;AN=56;BaseQRankSum=-5.079;DP=569;FS=4.003;HRun=11;HaplotypeScore=64.5771;InbreedingCoeff=0.5207;MQ=77.36;MQ0=0;MQRankSum=-2.122;QD=16.72;ReadPosRankSum=4.762;VQSLOD=5.8025;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,17:19:38.95:320,39,0	1/1:1,12:13:29.92:246,30,0	0/0:25,1:23:0.40:0,0,181	0/0:16,0:14:2.72:0,3,210	1/1:7,22:29:65.27:538,65,0	1/1:3,13:16:29.94:246,30,0	0/1:2,12:14:2.02:191,0,2	1/1:7,21:28:62.87:509,63,0	1/1:2,20:22:41.95:345,42,0	1/1:6,15:21:44.94:369,45,0	1/1:8,18:26:47.89:392,48,0	1/1:4,10:14:20.97:172,21,0	1/1:2,21:23:44.94:369,45,0	1/1:1,12:13:11.94:247,12,0	1/1:0,23:24:52.98:425,53,0	1/1:4,11:15:23.85:197,24,0	1/1:2,23:25:53.93:443,54,0	1/1:3,12:16:34.99:277,35,0	1/1:5,21:28:47.44:492,47,0	1/1:4,25:29:74.83:605,75,0	1/1:1,8:9:17.98:148,18,0	1/1:5,17:22:3.77:258,4,0	1/1:2,18:21:46.98:375,47,0	1/1:2,13:15:20.95:172,21,0	1/1:2,20:22:15:319,15,0	1/1:4,21:25:62.50:500,63,0	1/1:5,20:26:58.97:474,59,0	1/1:3,7:11:23.01:178,23,0
chr10	32562831	.	GA	G	11917.53	PASS	AB=0.813;AC=51;AF=0.911;AN=56;BaseQRankSum=5.058;DP=612;FS=4.193;HRun=10;HaplotypeScore=73.8726;InbreedingCoeff=0.4895;MQ=77.88;MQ0=0;MQRankSum=-0.785;QD=20.48;ReadPosRankSum=2.336;VQSLOD=6.0051;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,21:26:62.02:527,62,0	1/1:0,15:15:41.98:365,42,0	0/1:15,1:16:1.47:1,0,62	0/1:10,1:11:11.49:11,0,37	1/1:4,23:27:74.34:629,74,0	1/1:2,12:14:35.99:312,36,0	1/1:0,17:17:41.99:365,42,0	1/1:5,22:27:65.92:561,66,0	1/1:2,15:17:38.98:338,39,0	1/1:2,27:29:80.85:689,81,0	1/1:0,16:16:44.99:391,45,0	1/1:4,22:26:62.98:546,63,0	1/1:4,24:28:71.97:625,72,0	1/1:2,18:20:50.99:443,51,0	0/0:28,2:30:29.11:0,29,771	1/1:5,20:25:38.60:496,39,0	1/1:2,24:26:68.98:599,69,0	1/1:2,12:14:29.98:260,30,0	1/1:2,14:16:41.10:359,41,0	1/1:2,21:23:59.93:513,60,0	1/1:3,16:20:50.02:423,50,0	1/1:2,16:18:35.92:312,36,0	0/1:7,17:25:32.24:294,0,32	1/1:1,25:26:74.98:651,75,0	1/1:3,26:29:74.98:651,75,0	1/1:2,19:21:51.96:487,52,0	1/1:3,35:38:99:885,102,0	1/1:0,12:12:21:182,21,0
chr10	32564491	.	G	GT	6317.99	PASS	AB=0.683;AC=48;AF=0.857;AN=56;BaseQRankSum=-4.442;DP=574;FS=1.195;HRun=12;HaplotypeScore=77.1393;InbreedingCoeff=0.3311;MQ=70.94;MQ0=0;MQRankSum=-1.088;QD=11.79;ReadPosRankSum=-0.228;VQSLOD=4.6174;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:29:3.14:46,3,0	0/1:1,5:6:9.89:76,0,10	0/1:11,0:12:4.62:5,0,48	0/0:9,0:9:6.85:0,7,58	1/1:11,21:33:37.40:446,37,0	1/1:5,15:21:29.20:310,29,0	1/1:4,16:21:29.21:315,29,0	1/1:25,0:25:25.52:129,26,0	1/1:3,13:16:7.93:241,8,0	1/1:12,18:30:10.36:415,10,0	1/1:6,19:25:38.92:350,39,0	1/1:5,14:19:1.26:335,1,0	1/1:4,14:18:18.03:175,18,0	1/1:2,19:21:30.05:292,30,0	0/0:29,0:29:64.57:0,65,459	1/1:3,11:14:24.04:234,24,0	1/1:8,29:38:49.99:625,50,0	1/1:1,11:12:24.04:234,24,0	1/1:22,0:22:20.66:95,21,0	1/1:19,0:20:28.63:139,29,0	1/1:10,0:10:7.87:48,8,0	1/1:5,11:16:0.01:155,0,0	0/1:4,8:12:3.88:128,0,4	0/1:9,21:30:43.42:430,0,43	1/1:5,15:20:14.15:299,14,0	1/1:7,20:27:35.03:461,35,0	1/1:26,0:24:23.52:108,24,0	1/1:4,8:12:24.02:228,24,0
chr10	32564502	.	T	TTTTTC	5128.69	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=-3.715;DP=583;FS=0.000;HRun=0;HaplotypeScore=130.4445;InbreedingCoeff=0.8861;MQ=68.67;MQ0=0;MQRankSum=-4.941;QD=29.48;ReadPosRankSum=-7.116;VQSLOD=3.0751;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:7,12:29:30.52:557,31,0	0/0:6,0:6:14.78:0,15,132	0/0:9,0:9:17.08:0,17,203	0/0:9,0:9:11.10:0,11,116	0/0:29,0:29:22.36:0,22,370	0/0:19,0:19:39.37:0,39,286	0/0:21,0:21:47.49:0,47,353	1/1:11,13:27:55.13:1315,55,0	0/0:17,0:17:32.39:0,32,254	0/0:22,0:22:59.28:0,59,470	0/0:27,0:27:31.30:0,31,450	0/0:19,0:19:50.45:0,50,414	0/0:18,0:18:29.74:0,30,221	0/0:20,0:20:32.55:0,33,216	0/0:30,0:30:87.14:0,87,1291	0/0:13,0:13:26.62:0,27,181	0/0:37,0:37:79.53:0,80,578	0/0:13,0:13:29.63:0,30,200	1/1:11,12:25:56.19:1262,56,0	1/1:4,14:26:63.03:1068,63,0	1/1:2,1:9:10.28:157,10,0	0/0:16,0:16:24.03:0,24,212	0/0:18,0:18:32.11:0,32,268	0/0:31,0:31:77.24:0,77,707	0/0:21,0:21:50.39:0,50,387	0/1:30,0:30:9.94:10,0,447	1/1:7,10:25:39.13:758,39,0	0/0:14,0:14:39.46:0,39,280
chr10	32567047	.	GAC	G	3167.25	PASS	AB=0.905;AC=16;AF=0.286;AN=56;BaseQRankSum=12.232;DP=711;FS=8.099;HRun=0;HaplotypeScore=94.8761;InbreedingCoeff=0.5757;MQ=64.10;MQ0=12;MQRankSum=-0.688;QD=12.72;ReadPosRankSum=0.448;VQSLOD=3.0279;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:10,22:33:53.98:625,54,0	0/0:7,0:7:18.06:0,18,288	0/0:58,0:29:35.70:0,36,516	0/0:49,1:30:17.42:0,17,362	0/0:27,2:29:33.25:0,33,988	0/1:21,2:23:14.75:15,0,735	0/0:23,1:25:1.06:0,1,670	1/1:11,22:33:60.54:664,61,0	0/0:20,1:21:9.18:0,9,635	0/0:27,1:28:13.48:0,13,990	0/0:25,2:27:18.22:0,18,774	0/0:14,0:14:33.11:0,33,524	0/0:22,0:22:60.20:0,60,947	0/0:23,1:24:27.25:0,27,921	0/0:18,1:19:12.19:0,12,681	0/0:22,0:22:63.21:0,63,1001	0/0:29,4:33:0.32:0,0,983	0/1:10,1:11:3.08:3,0,331	1/1:6,7:11:18.01:189,18,0	1/1:5,19:27:53.66:582,54,0	1/1:5,18:24:38.95:445,39,0	0/0:23,0:22:24.63:0,25,851	0/1:17,2:19:17.75:18,0,711	0/0:18,1:19:6.16:0,6,564	0/0:27,1:28:24.22:0,24,837	0/1:31,5:35:65.82:66,0,925	1/1:5,23:29:65.66:747,66,0	0/0:11,0:11:24.02:0,24,331
chr10	32568009	.	TGGG	T	18430.95	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=1.272;DP=630;FS=11.985;HRun=9;HaplotypeScore=102.6019;InbreedingCoeff=0.9982;MQ=76.67;MQ0=0;MQRankSum=-7.022;QD=31.83;ReadPosRankSum=5.014;VQSLOD=2.5315;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,30:36:72.20:998,72,0	1/1:0,10:10:24.08:341,24,0	0/0:18,0:19:49.38:0,49,878	0/0:11,0:11:30.07:0,30,546	1/1:4,30:34:75.24:1064,75,0	1/1:0,21:21:57.18:809,57,0	1/1:4,12:16:27.08:383,27,0	1/1:5,25:30:72.21:1002,72,0	1/1:3,19:22:51.16:724,51,0	1/1:3,18:21:54.15:731,54,0	1/1:6,23:29:60.19:851,60,0	1/1:4,27:31:72.21:1021,72,0	1/1:1,25:26:60.20:852,60,0	1/1:7,23:30:48.14:681,48,0	0/0:21,0:21:60.21:0,60,1275	1/1:1,16:17:39.13:553,39,0	1/1:5,21:26:54.17:767,54,0	1/1:2,13:15:39.13:553,39,0	1/1:3,11:14:33.10:465,33,0	1/1:4,19:23:42.06:573,42,0	1/1:2,27:29:53.85:765,54,0	1/1:2,22:24:51.17:724,51,0	1/1:2,13:15:36.11:511,36,0	1/1:0,27:27:69.23:979,69,0	1/1:0,29:29:75.25:1065,75,0	1/1:1,17:18:48.12:657,48,0	1/1:0,27:27:69.23:979,69,0	1/1:0,9:9:27.09:383,27,0
chr10	32569232	.	AT	A	17951.45	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=14.345;DP=704;FS=2.418;HRun=1;HaplotypeScore=71.6172;InbreedingCoeff=0.9999;MQ=85.73;MQ0=0;MQRankSum=-4.983;QD=39.63;ReadPosRankSum=4.993;VQSLOD=5.4175;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:93.27:0,93,1432	1/1:0,14:14:42.14:587,42,0	0/0:33,0:33:84.07:0,84,1291	0/0:15,0:15:45.15:0,45,707	1/1:0,25:25:66.22:922,66,0	1/1:0,30:30:90.30:1258,90,0	1/1:0,19:19:48.16:671,48,0	0/0:33,0:33:93.32:0,93,1487	1/1:0,27:27:75.25:1049,75,0	1/1:0,29:29:87.29:1217,87,0	1/1:0,35:35:99:1426,102,0	1/1:0,20:20:57.19:797,57,0	1/1:0,35:35:93.31:1299,93,0	1/1:0,33:33:96.32:1342,96,0	0/0:30,0:30:90.29:0,90,1414	1/1:0,25:25:75.25:1049,75,0	1/1:0,17:17:51.13:691,51,0	1/1:0,17:17:45.15:629,45,0	0/0:21,0:21:60.20:0,60,939	0/0:32,0:32:93.30:0,93,1461	0/0:17,0:17:51.16:0,51,791	1/1:0,23:23:63.21:880,63,0	1/1:0,19:19:51.17:712,51,0	1/1:0,16:16:45.15:629,45,0	1/1:0,25:25:69.23:965,69,0	1/1:0,33:33:99:1367,99,0	0/0:39,0:39:99:0,114,1792	1/1:0,11:11:33.11:461,33,0
chr10	32570880	.	GA	G	2002.96	PASS	AC=12;AF=0.222;AN=54;BaseQRankSum=-4.703;DP=334;FS=4.138;HRun=9;HaplotypeScore=48.2591;InbreedingCoeff=0.9843;MQ=79.28;MQ0=0;MQRankSum=-0.647;QD=21.31;ReadPosRankSum=-1.329;VQSLOD=3.7367;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,15:16:42.02:384,42,0	./.	0/0:9,0:9:21.12:0,21,241	0/0:13,0:13:17.09:0,17,280	0/0:18,0:18:54.16:0,54,623	0/0:15,0:15:36.11:0,36,415	0/0:13,0:13:39.10:0,39,441	1/1:3,18:21:50.99:457,51,0	0/0:16,0:16:42.12:0,42,485	0/0:9,0:9:24.07:0,24,277	0/0:9,0:9:27.08:0,27,312	0/0:8,0:9:18.01:0,18,193	0/0:8,0:8:24.07:0,24,277	0/0:14,0:14:42.10:0,42,464	0/0:4,0:4:12.04:0,12,139	0/0:8,0:8:21.06:0,21,242	0/0:21,0:21:57.15:0,57,647	0/0:10,0:10:27.55:0,28,311	1/1:1,14:15:18.71:358,19,0	1/1:1,15:16:42.02:384,42,0	1/1:2,8:10:24.01:220,24,0	0/0:15,0:15:39.12:0,39,450	0/0:9,0:9:27.08:0,27,312	0/0:9,0:9:27.08:0,27,312	0/0:11,0:11:30.08:0,30,338	0/0:11,0:11:27.08:0,27,309	1/1:0,16:16:42.02:384,42,0	0/0:9,0:9:27.08:0,27,312
chr10	32575456	.	T	TAC	833.66	PASS	AB=0.981;AC=39;AF=0.780;AN=50;BaseQRankSum=-3.151;DP=506;FS=1.418;HRun=0;HaplotypeScore=119.9853;InbreedingCoeff=-0.0393;MQ=64.60;MQ0=21;MQRankSum=1.262;QD=1.92;ReadPosRankSum=0.952;VQSLOD=2.4757;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:39,0:37:7.71:16,0,8	./.	./.	./.	1/1:23,0:23:3.40:23,3,0	1/1:24,1:24:6.01:71,6,0	0/1:15,0:14:5.36:16,0,5	1/1:24,0:21:1.36:3,1,0	1/1:19,0:20:4.36:32,4,0	0/1:27,0:27:6.80:14,0,7	1/1:12,0:11:0.89:2,1,0	1/1:13,0:13:11.96:100,12,0	1/1:18,0:18:3.01:32,3,0	1/1:10,0:10:8.99:86,9,0	0/1:12,3:15:25.61:34,0,26	1/1:11,0:11:3.01:31,3,0	0/0:22,0:21:2.17:0,2,22	1/1:12,0:9:6.01:77,6,0	0/1:12,0:11:0:0,0,0	0/1:16,0:16:0:0,0,0	1/1:27,0:25:11.95:92,12,0	0/1:14,0:14:19:25,0,19	1/1:18,0:18:5.63:62,6,0	0/1:34,0:33:37.79:153,0,38	0/1:13,0:13:14.89:32,0,15	1/1:19,0:19:5.12:29,5,0	1/1:11,0:11:3.86:23,4,0	1/1:6,0:6:0.47:1,0,0
chr10	32575457	.	A	ACC	6266.09	PASS	AB=0.716;AC=46;AF=0.821;AN=56;BaseQRankSum=-1.172;DP=521;FS=0.000;HRun=1;HaplotypeScore=107.6295;InbreedingCoeff=0.3979;MQ=63.70;MQ0=22;MQRankSum=-1.608;QD=13.62;ReadPosRankSum=2.855;VQSLOD=1.7994;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:40,0:38:56.09:510,56,0	1/1:5,0:5:11.98:101,12,0	0/0:16,0:10:27.06:0,27,289	0/0:30,0:19:40.81:0,41,450	1/1:23,0:23:39.01:373,39,0	1/1:26,0:25:62.62:543,63,0	1/1:15,0:14:17.08:152,17,0	1/1:24,0:21:53.36:456,53,0	1/1:5,16:21:2.07:54,2,0	1/1:26,0:26:60.39:546,60,0	1/1:13,0:12:26.35:191,26,0	1/1:12,1:13:30.04:346,30,0	1/1:2,15:18:3.42:59,3,0	1/1:10,1:11:27.04:316,27,0	0/0:15,0:15:17.28:0,17,287	1/1:2,9:12:3.01:58,3,0	1/1:22,0:21:44.36:358,44,0	0/1:7,6:10:19.83:94,0,20	1/1:13,0:12:5.35:172,5,0	1/1:15,0:15:35.35:289,35,0	1/1:28,0:25:38.54:440,39,0	1/1:5,12:18:3.90:60,4,0	1/1:1,17:18:5.40:115,5,0	0/1:7,28:34:32.27:260,0,32	0/1:6,8:15:11.63:55,0,12	1/1:18,0:18:42.51:425,43,0	0/1:12,0:12:2.28:201,0,2	1/1:6,0:6:12.41:92,12,0
chr10	32576183	.	A	AT	12690.55	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-11.771;DP=662;FS=8.455;HRun=8;HaplotypeScore=64.0866;InbreedingCoeff=0.9806;MQ=78.97;MQ0=0;MQRankSum=-3.468;QD=27.95;ReadPosRankSum=4.142;VQSLOD=5.1119;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:69.03:0,69,631	1/1:3,9:12:24.07:276,24,0	0/0:20,0:20:47.81:0,48,411	0/0:15,0:15:17.59:0,18,144	1/1:4,33:37:81.16:905,81,0	1/1:5,32:37:84.25:969,84,0	1/1:4,16:20:42.12:485,42,0	0/0:32,0:32:72:0,72,659	1/1:2,17:19:54.14:611,54,0	1/1:7,26:33:44.72:769,45,0	1/1:2,23:25:57.04:612,57,0	1/1:3,25:28:75.22:864,75,0	1/1:4,28:32:78.18:884,78,0	1/1:0,13:13:36.11:416,36,0	0/0:30,0:30:63.13:0,63,710	1/1:3,22:25:63.19:727,63,0	1/1:3,27:30:81.24:935,81,0	1/1:1,2:3:5.98:54,6,0	0/0:21,0:21:50.97:0,51,453	0/0:25,0:25:66.03:0,66,604	0/0:6,0:6:18.01:0,18,165	1/1:0,24:24:66.20:762,66,0	1/1:0,20:20:57.09:628,57,0	1/1:3,24:27:72.21:831,72,0	1/1:3,16:19:48.14:554,48,0	1/1:7,28:35:84.24:959,84,0	0/0:35,0:35:96.02:0,96,872	1/1:0,15:15:39.12:450,39,0
chr10	32578067	.	CTG	C	17085.53	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=3.649;DP=600;FS=7.740;HRun=0;HaplotypeScore=75.6365;InbreedingCoeff=0.9939;MQ=70.59;MQ0=3;MQRankSum=-2.371;QD=31.52;ReadPosRankSum=2.283;VQSLOD=6.4429;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,30:34:81.26:1042,81,0	1/1:2,8:10:24.08:309,24,0	0/0:8,0:8:21.06:0,21,301	0/0:15,0:15:28.72:0,29,535	1/1:0,26:26:75.16:928,75,0	1/1:5,16:21:48.16:618,48,0	1/1:2,16:18:36.12:463,36,0	1/1:9,31:40:90.29:1158,90,0	1/1:0,10:10:30.10:386,30,0	1/1:2,14:16:42.14:540,42,0	1/1:0,27:27:72.23:927,72,0	1/1:0,27:26:69.22:888,69,0	1/1:1,21:22:63.20:811,63,0	1/1:2,25:26:60.19:772,60,0	0/0:35,0:35:99:0,99,1662	1/1:1,16:17:45.15:579,45,0	1/1:4,22:26:57.19:733,57,0	1/1:0,9:9:27.09:347,27,0	1/1:3,19:21:48.16:618,48,0	1/1:1,34:35:96.27:1217,96,0	1/1:5,17:22:42.14:541,42,0	1/1:2,8:10:21.07:270,21,0	1/1:3,15:18:45.15:579,45,0	1/1:1,7:8:21.07:270,21,0	1/1:2,22:24:54.18:695,54,0	1/1:6,23:29:69.22:888,69,0	1/1:2,31:33:87.28:1120,87,0	1/1:1,10:11:30.10:386,30,0
chr10	32579593	.	A	AACACAC	4382.79	PASS	AB=0.901;AC=38;AF=0.731;AN=52;BaseQRankSum=-5.124;DP=565;FS=6.986;HRun=0;HaplotypeScore=142.0090;InbreedingCoeff=0.4351;MQ=53.81;MQ0=11;MQRankSum=-2.695;QD=10.72;ReadPosRankSum=-0.834;VQSLOD=3.4265;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:36:26.27:0,26,563	1/1:1,5:7:9:118,9,0	./.	0/1:55,0:21:35.86:38,0,36	./.	1/1:10,8:20:8.78:162,9,0	1/1:3,8:15:3.01:56,3,0	0/1:15,0:30:10.78:11,0,167	1/1:3,9:19:6.02:133,6,0	1/1:8,9:20:32.98:549,33,0	1/1:2,8:12:3.01:30,3,0	1/1:8,0:27:26.89:305,27,0	1/1:4,0:13:14.72:192,15,0	0/1:7,0:23:23.72:176,0,24	0/0:24,0:26:51.09:0,51,907	1/1:4,8:14:9.03:294,9,0	1/1:5,8:14:12.04:251,12,0	1/1:3,7:10:14.98:331,15,0	0/1:6,0:7:24.54:25,0,33	0/0:6,0:19:30.03:0,30,393	0/0:4,0:15:14.85:0,15,188	1/1:6,10:21:0.60:94,1,0	1/1:6,0:18:11.26:139,11,0	1/1:7,0:26:29.31:365,29,0	1/1:8,11:22:3.01:39,3,0	1/1:8,14:25:35.08:879,35,0	0/0:12,0:22:33.08:0,33,423	1/1:0,6:9:6.02:197,6,0
chr10	32579644	.	GGAGAGAGA	G	60.51	PASS	AC=6;AF=0.115;AN=52;BaseQRankSum=2.849;DP=477;FS=12.908;HRun=0;HaplotypeScore=117.3130;InbreedingCoeff=0.4099;MQ=47.64;MQ0=26;MQRankSum=-1.722;QD=1.12;ReadPosRankSum=-0.815;VQSLOD=1.3807;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:36:6.33:0,6,51	0/0:5,0:5:6.02:0,6,156	./.	./.	0/0:8,0:8:3.01:0,3,50	0/0:12,0:11:18.06:0,18,477	0/0:17,0:16:11.96:0,12,183	0/0:26,0:23:1.72:0,2,4	0/0:12,0:12:11.40:0,11,252	0/0:15,0:15:20.28:0,20,452	0/0:12,0:12:0:0,0,0	0/0:23,0:20:9.10:0,9,174	0/0:13,0:13:15.05:0,15,399	0/0:12,0:12:6.01:0,6,140	0/0:26,0:25:20.26:0,20,237	0/0:8,0:8:5.19:0,5,116	0/0:14,0:14:13.58:0,14,219	0/0:6,0:6:4.57:0,5,97	1/1:12,0:12:2.85:58,3,0	1/1:16,0:16:0.10:25,0,0	0/0:21,0:20:0:0,0,0	0/0:17,0:17:9.49:0,9,199	0/0:12,0:12:3.01:0,3,45	0/0:20,0:20:18.06:0,18,522	0/0:19,0:18:2.88:0,3,66	0/0:17,0:16:18.06:0,18,461	1/1:14,11:26:5.41:80,5,0	0/0:13,0:10:2.92:0,3,17
chr10	32579696	.	A	AGT	7109.79	PASS	AB=0.528;AC=49;AF=0.875;AN=56;BaseQRankSum=-2.086;DP=482;FS=16.921;HRun=0;HaplotypeScore=65.0014;InbreedingCoeff=0.9292;MQ=65.14;MQ0=14;MQRankSum=-2.664;QD=17.38;ReadPosRankSum=1.003;VQSLOD=3.1672;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:24:56.56:463,57,0	1/1:6,0:6:17.93:140,18,0	0/0:21,0:8:17.80:0,18,151	0/0:35,0:20:43.19:0,43,467	1/1:14,0:14:32.67:248,33,0	1/1:16,0:16:37.09:308,37,0	1/1:18,0:17:25.06:217,25,0	1/1:36,0:35:84.35:731,84,0	1/1:11,0:10:26.62:203,27,0	1/1:21,0:21:60.98:546,61,0	1/1:9,0:9:20.94:170,21,0	1/1:21,1:20:50.92:440,51,0	1/1:15,0:15:37.19:284,37,0	1/1:13,0:13:26.95:220,27,0	0/0:17,0:16:44.55:0,45,388	1/1:15,0:15:38.69:295,39,0	0/1:2,14:19:0:0,0,0	1/1:10,0:10:26.53:200,27,0	1/1:18,0:17:41.86:307,42,0	1/1:10,0:10:23.47:170,23,0	1/1:16,0:16:35.88:284,36,0	1/1:13,0:13:29.56:215,30,0	1/1:11,0:10:26.58:192,27,0	1/1:22,0:23:53.28:451,53,0	1/1:9,0:9:20.83:172,21,0	1/1:22,1:23:56.50:496,56,0	1/1:26,0:25:33.24:257,33,0	1/1:9,0:7:14.77:103,15,0
chr10	32580418	.	C	CA	22303.69	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=8.363;DP=673;FS=9.653;HRun=2;HaplotypeScore=106.0520;InbreedingCoeff=0.9995;MQ=78.83;MQ0=0;MQRankSum=-8.995;QD=37.80;ReadPosRankSum=3.370;VQSLOD=4.4099;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,40:41:99:1446,105,0	1/1:0,12:12:33.11:456,33,0	0/0:31,0:31:87.13:0,87,1045	0/0:23,0:22:57.15:0,57,697	1/1:3,20:23:63.14:823,63,0	1/1:2,32:34:87.29:1222,87,0	1/1:3,32:35:87.27:1202,87,0	1/1:1,33:34:96.25:1254,96,0	1/1:1,17:18:51.16:699,51,0	1/1:0,24:23:72.24:1001,72,0	1/1:0,16:16:42.14:590,42,0	1/1:2,21:23:54.18:753,54,0	1/1:2,22:24:66.22:921,66,0	1/1:0,32:32:93.31:1310,93,0	0/0:29,0:29:84.26:0,84,1041	1/1:3,27:30:72.24:1010,72,0	1/1:4,23:27:78.22:1064,78,0	1/1:1,14:15:39.13:547,39,0	1/1:2,18:20:60.17:818,60,0	1/1:0,17:17:51.17:709,51,0	1/1:0,24:24:72.24:1013,72,0	1/1:0,21:21:63.17:859,63,0	1/1:3,12:15:39.13:539,39,0	1/1:2,30:32:87.29:1227,87,0	1/1:0,15:15:45.15:628,45,0	1/1:1,16:17:51.17:712,51,0	1/1:3,29:32:81.27:1121,81,0	1/1:0,9:9:27.09:380,27,0
chr10	32580420	.	A	AAT	15004.59	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=10.858;DP=664;FS=6.773;HRun=0;HaplotypeScore=145.2872;InbreedingCoeff=0.9992;MQ=78.88;MQ0=0;MQRankSum=-7.452;QD=25.83;ReadPosRankSum=5.633;VQSLOD=5.3041;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:42,0:42:78.69:902,79,0	1/1:12,0:12:32.97:292,33,0	0/0:31,0:32:90.15:0,90,1405	0/0:22,0:21:57.19:0,57,929	1/1:21,1:22:63.01:617,63,0	1/1:34,0:34:65.40:787,65,0	1/1:34,0:34:65.30:807,65,0	1/1:35,0:35:93.22:1072,93,0	1/1:17,0:17:50.73:460,51,0	1/1:24,0:23:71.91:693,72,0	1/1:14,0:14:41.97:372,42,0	1/1:21,0:21:54.01:494,54,0	1/1:23,1:24:54.44:629,54,0	1/1:32,0:32:82.16:864,82,0	0/0:29,0:29:87.29:0,87,1396	1/1:26,0:26:72.11:687,72,0	1/1:26,1:27:64.49:703,64,0	1/1:14,0:14:38.96:337,39,0	1/1:20,0:20:59.98:551,60,0	1/1:17,0:17:51.04:472,51,0	1/1:25,0:25:60.66:659,61,0	1/1:22,0:22:61.51:538,62,0	1/1:13,1:14:28.20:369,28,0	1/1:33,0:33:74.32:782,74,0	1/1:15,0:15:45.07:429,45,0	1/1:18,0:18:37.49:486,37,0	1/1:29,1:30:81.02:765,81,0	1/1:9,0:9:26.99:237,27,0
chr10	32580643	.	C	CATTATT	3720.91	PASS	AB=1.000;AC=36;AF=0.818;AN=44;BaseQRankSum=-4.819;DP=289;FS=0.000;HRun=0;HaplotypeScore=77.9537;InbreedingCoeff=0.3646;MQ=74.31;MQ0=0;MQRankSum=0.707;QD=16.39;ReadPosRankSum=0.350;VQSLOD=2.6269;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:15.96:0,16,169	1/1:5,0:5:9.01:135,9,0	./.	./.	1/1:7,9:16:21:309,21,0	1/1:5,8:13:6.02:182,6,0	1/1:4,0:4:3.01:49,3,0	1/1:37,0:32:15.67:345,16,0	./.	1/1:4,0:7:6.02:173,6,0	1/1:13,0:13:15.05:384,15,0	1/1:8,0:11:3.01:78,3,0	1/1:6,0:6:9.02:147,9,0	1/1:6,0:6:12.04:269,12,0	0/0:3,0:8:6.02:0,6,84	1/1:7,1:8:9.02:217,9,0	1/1:10,15:26:9.03:243,9,0	1/1:11,0:11:12:208,12,0	0/1:10,0:9:17.10:31,0,17	0/0:9,0:9:3.01:0,3,37	./.	./.	1/1:11,0:11:12.04:211,12,0	./.	1/1:6,6:13:9.03:285,9,0	1/1:4,1:5:6.02:144,6,0	0/1:17,0:17:23.62:153,0,24	1/1:2,0:8:6.02:158,6,0
chr10	32580674	.	ATTGTTGTTG	A	1269.89	PASS	AB=0.970;AC=7;AF=0.130;AN=54;BaseQRankSum=-2.563;DP=226;FS=8.407;HRun=0;HaplotypeScore=84.7310;InbreedingCoeff=0.3269;MQ=48.07;MQ0=1;MQRankSum=-3.258;QD=18.14;ReadPosRankSum=-1.303;VQSLOD=1.3384;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,2:14:20.56:424,21,0	0/0:4,0:4:6.02:0,6,144	0/1:5,0:2:11.64:12,0,63	0/0:3,0:2:2.68:0,3,62	0/0:9,0:9:17.89:0,18,360	0/0:9,0:9:12.01:0,12,226	0/0:5,0:5:11.97:0,12,100	1/1:18,18:31:56.34:758,56,0	0/0:4,0:4:11.91:0,12,90	0/0:9,0:9:21.06:0,21,366	0/0:9,0:9:20.79:0,21,426	0/0:5,0:5:6:0,6,130	0/0:4,0:4:12.04:0,12,352	0/0:5,0:5:12.03:0,12,291	0/0:9,0:9:18.06:0,18,472	0/0:8,0:8:21.05:0,21,430	0/0:22,0:21:20.60:0,21,271	0/0:10,0:10:23.98:0,24,473	0/1:5,0:4:66.86:70,0,67	0/0:2,0:2:3.01:0,3,55	./.	0/0:2,0:2:5.99:0,6,50	0/0:9,0:9:21:0,21,289	0/0:1,0:1:3:0,3,26	0/0:14,0:14:29.85:0,30,455	0/0:7,0:7:15.50:0,16,204	0/1:9,0:10:99:143,0,120	0/0:6,0:6:9.03:0,9,260
chr10	32584671	.	G	GA	17735.40	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-9.063;DP=634;FS=4.765;HRun=7;HaplotypeScore=55.2870;InbreedingCoeff=0.9755;MQ=79.19;MQ0=0;MQRankSum=-3.476;QD=30.58;ReadPosRankSum=1.556;VQSLOD=5.4036;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,12:14:33.10:399,33,0	1/1:2,11:13:23.94:290,24,0	0/0:18,0:18:36.03:0,36,341	0/0:12,0:12:12.25:0,12,189	1/1:2,27:29:80.75:919,81,0	1/1:3,24:27:11.25:703,11,0	1/1:1,17:18:51.16:616,51,0	1/1:7,36:43:99:1241,105,0	1/1:1,18:19:51.16:616,51,0	1/1:4,21:25:63.16:737,63,0	1/1:2,29:31:84.22:998,84,0	1/1:6,13:19:39.12:471,39,0	1/1:3,20:23:60.18:725,60,0	1/1:2,21:23:60.18:725,60,0	0/0:24,0:24:63.10:0,63,608	1/1:1,20:21:60.18:725,60,0	1/1:0,13:13:36.11:435,36,0	1/1:5,13:18:42.09:491,42,0	1/1:3,13:16:39.12:470,39,0	1/1:2,33:34:90.23:1071,90,0	1/1:2,11:13:33.10:399,33,0	1/1:6,23:29:72.22:862,72,0	1/1:2,23:25:66.20:797,66,0	1/1:1,15:16:45.14:543,45,0	1/1:3,14:17:42.13:507,42,0	1/1:0,24:24:72.20:856,72,0	1/1:7,44:51:99:1594,132,0	1/1:1,17:18:45.14:544,45,0
chr10	32586489	.	GT	G	2640.29	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=11.905;DP=423;FS=6.138;HRun=9;HaplotypeScore=40.6982;InbreedingCoeff=0.9595;MQ=65.36;MQ0=0;MQRankSum=-0.411;QD=21.82;ReadPosRankSum=-1.982;VQSLOD=3.2779;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,20:21:60.03:549,60,0	0/0:9,0:9:24.07:0,24,277	0/0:5,0:4:6.02:0,6,66	0/0:4,0:4:9.02:0,9,93	0/0:26,0:26:75.21:0,75,857	0/0:16,0:16:48.13:0,48,544	0/0:8,0:8:24.02:0,24,261	1/1:7,29:36:87:786,87,0	0/0:12,0:12:36.09:0,36,398	0/0:13,1:14:14.66:0,15,417	0/0:25,0:25:72.20:0,72,822	0/0:18,0:18:45.12:0,45,510	0/0:11,0:11:33.07:0,33,362	0/0:13,0:13:33.09:0,33,372	0/0:9,0:9:27.08:0,27,312	0/0:10,0:10:27.07:0,27,303	0/0:18,0:18:51.15:0,51,589	0/0:14,0:14:33.10:0,33,381	1/1:1,13:14:39:351,39,0	1/1:1,24:25:65.95:593,66,0	1/1:0,6:6:18.01:165,18,0	0/0:7,0:7:21.06:0,21,242	0/0:13,0:13:36.08:0,36,396	0/0:8,0:8:21.05:0,21,231	0/0:34,0:34:90.25:0,90,1023	0/0:17,0:17:45.12:0,45,511	1/1:2,17:19:42.02:384,42,0	0/0:11,0:11:33.07:0,33,362
chr10	32589219	.	GT	G	8464.32	PASS	AB=0.923;AC=39;AF=0.696;AN=56;BaseQRankSum=-11.283;DP=568;FS=5.112;HRun=9;HaplotypeScore=69.6022;InbreedingCoeff=0.8894;MQ=72.88;MQ0=1;MQRankSum=-1.717;QD=21.37;ReadPosRankSum=4.736;VQSLOD=5.5726;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:2,0:25:53.97:0,54,274	1/1:1,7:8:15:137,15,0	0/0:14,0:12:12.31:0,12,95	0/1:11,0:10:3.39:3,0,78	1/1:5,34:39:99:903,99,0	1/1:3,21:24:63.03:577,63,0	1/1:2,7:9:18.01:165,18,0	0/0:5,0:28:61.46:0,61,313	1/1:2,12:14:33.02:302,33,0	1/1:4,15:19:45.02:412,45,0	1/1:4,22:26:66.03:604,66,0	1/1:1,12:13:36.01:330,36,0	1/1:2,22:24:56.97:521,57,0	1/1:1,12:13:33.02:302,33,0	0/0:19,0:19:54.16:0,54,623	1/1:4,19:23:48.02:439,48,0	1/1:3,24:27:28.42:515,28,0	1/1:1,18:19:45.02:412,45,0	0/0:6,0:26:56.92:0,57,297	0/0:3,0:25:65.51:0,66,352	0/0:2,0:6:8.52:0,9,43	1/1:3,16:19:51:462,51,0	1/1:0,23:23:62.86:576,63,0	1/1:4,11:15:27.01:247,27,0	1/1:1,23:24:63.03:577,63,0	1/1:4,26:30:78.04:713,78,0	0/0:4,0:29:71.05:0,71,361	1/1:2,13:15:1.40:267,1,0
chr10	32589941	.	AT	A	2570.53	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=12.394;DP=560;FS=11.352;HRun=9;HaplotypeScore=53.5232;InbreedingCoeff=0.8947;MQ=70.60;MQ0=1;MQRankSum=-4.807;QD=20.73;ReadPosRankSum=-1.933;VQSLOD=2.9343;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,15:16:45.02:412,45,0	0/0:4,0:4:12.04:0,12,138	0/0:16,0:13:20.49:0,20,187	0/1:8,0:8:16.28:16,0,45	0/0:29,0:29:72.21:0,72,831	0/0:26,0:26:60.16:0,60,680	0/0:23,0:23:63.19:0,63,727	1/1:2,23:25:66.03:604,66,0	0/0:20,0:20:60.18:0,60,692	0/0:29,0:29:87.25:0,87,995	0/0:14,0:14:42.12:0,42,485	0/0:22,0:22:60.18:0,60,692	0/0:24,0:24:66.20:0,66,761	0/0:25,0:25:66.18:0,66,745	0/0:22,0:22:66.20:0,66,762	0/0:33,0:33:99:0,99,1142	0/0:21,0:21:57.17:0,57,658	0/0:15,0:15:42.11:0,42,474	1/1:3,14:17:42.02:384,42,0	1/1:0,21:21:48:439,48,0	1/1:0,8:8:21.01:192,21,0	0/0:17,0:17:48.13:0,48,546	0/0:16,0:16:39.12:0,39,450	0/0:16,0:16:48.14:0,48,554	0/0:26,0:26:63.13:0,63,711	0/0:24,0:24:63.19:0,63,726	1/1:3,26:29:78.03:713,78,0	0/0:14,0:14:42.11:0,42,473
chr10	32590230	.	TA	T	2274.16	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=10.573;DP=389;FS=6.018;HRun=8;HaplotypeScore=42.5509;InbreedingCoeff=0.9053;MQ=83.44;MQ0=1;MQRankSum=0.344;QD=22.30;ReadPosRankSum=-1.917;VQSLOD=3.1318;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,19:20:45.07:433,45,0	0/0:3,0:3:6.02:0,6,72	0/0:19,0:14:15.24:0,15,154	0/0:19,0:13:5.13:0,5,85	0/0:25,0:25:57.07:0,57,647	0/0:12,0:12:30.09:0,30,361	0/0:8,0:8:24.07:0,24,289	1/1:3,24:27:72.09:685,72,0	0/0:10,0:10:27.07:0,27,313	0/0:18,0:18:48.14:0,48,568	0/0:11,0:11:30.07:0,30,342	0/0:10,0:10:30.08:0,30,346	0/0:19,0:19:54.17:0,54,650	0/0:19,0:19:51.12:0,51,581	0/0:13,0:13:30.09:0,30,361	0/0:14,0:14:30.08:0,30,351	0/0:13,0:13:36.07:0,36,414	0/0:11,0:11:33.07:0,33,382	1/1:0,14:14:42.02:396,42,0	1/1:2,6:8:14.96:133,15,0	1/1:1,5:6:12.02:116,12,0	0/0:6,0:6:15.04:0,15,170	0/0:13,0:13:30.08:0,30,351	0/0:1,0:1:3.01:0,3,36	0/0:14,0:14:27.06:0,27,311	0/0:14,0:14:42.11:0,42,483	1/1:1,26:27:72.12:695,72,0	0/0:13,0:13:39.01:0,39,435
chr10	32590477	.	TTATA	T	3492.71	PASS	AC=32;AF=0.640;AN=50;BaseQRankSum=-5.485;DP=205;FS=10.194;HRun=0;HaplotypeScore=38.3022;InbreedingCoeff=0.6173;MQ=67.44;MQ0=5;MQRankSum=1.900;QD=29.85;ReadPosRankSum=4.898;VQSLOD=2.0615;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:8:3.01:0,3,38	./.	0/0:13,0:4:2.97:0,3,20	0/0:17,0:4:5.82:0,6,35	1/1:6,4:10:6.02:105,6,0	1/1:0,5:5:12.04:210,12,0	1/1:0,1:1:3.01:53,3,0	0/0:15,0:31:58.97:0,59,299	1/1:0,1:1:3.01:52,3,0	1/1:1,7:8:21.07:325,21,0	1/1:1,4:5:3.01:53,3,0	1/1:0,11:11:15.05:263,15,0	1/1:3,3:6:9:126,9,0	1/1:2,6:8:12.04:210,12,0	0/0:3,0:3:6.02:0,6,153	1/1:1,2:3:3.01:53,3,0	1/1:1,20:21:48.16:841,48,0	1/1:2,9:11:21.07:368,21,0	0/0:3,0:3:6.67:0,7,26	0/0:2,0:3:2.84:0,3,14	0/0:2,0:3:2.80:0,3,13	./.	./.	1/1:0,2:2:3.01:53,3,0	1/1:1,4:6:5.43:152,5,0	1/1:0,6:6:18.06:307,18,0	0/0:3,0:4:8.46:0,8,45	1/1:1,12:13:21.03:323,21,0
chr10	32590502	.	A	AATAT	2375.42	PASS	AB=1.000;AC=14;AF=0.259;AN=54;BaseQRankSum=-6.568;DP=197;FS=0.727;HRun=0;HaplotypeScore=48.2129;InbreedingCoeff=0.5961;MQ=77.39;MQ0=5;MQRankSum=-4.601;QD=32.10;ReadPosRankSum=-3.480;VQSLOD=2.6560;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,0:3:6.02:137,6,0	0/0:1,0:1:3.01:0,3,53	0/1:11,0:4:0.03:0,0,0	0/0:21,0:9:4.36:0,4,93	0/0:5,0:5:15.05:0,15,262	0/0:5,0:5:15.05:0,15,263	0/0:2,0:2:6.02:0,6,105	1/1:15,23:40:84.25:1885,84,0	0/0:3,0:3:9.03:0,9,132	0/0:4,0:4:12.04:0,12,189	0/0:3,0:3:6.02:0,6,92	0/1:8,0:8:13.37:13,0,343	0/0:6,0:6:18.06:0,18,307	0/0:5,0:5:12.04:0,12,210	0/0:3,0:3:6.02:0,6,105	0/0:3,0:3:9.03:0,9,149	0/0:22,0:22:60.17:0,60,1019	0/0:11,0:11:27.07:0,27,435	1/1:2,0:2:6.02:145,6,0	1/1:4,1:5:12.04:188,12,0	1/1:0,1:1:3.01:76,3,0	0/0:1,0:1:3.01:0,3,52	./.	0/0:4,0:4:9.03:0,9,144	0/0:7,0:7:17.55:0,18,272	0/0:7,0:7:21.07:0,21,368	1/1:1,2:4:5.81:89,6,0	0/0:10,0:10:24.08:0,24,407
chr10	32592017	.	T	TTGTGTG	1551.16	PASS	AB=0.851;AC=11;AF=0.196;AN=56;BaseQRankSum=6.990;DP=614;FS=10.944;HRun=0;HaplotypeScore=147.2724;InbreedingCoeff=0.8187;MQ=71.15;MQ0=3;MQRankSum=-3.786;QD=10.07;ReadPosRankSum=-3.358;VQSLOD=0.8947;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:33,4:39:43.60:288,0,44	0/0:4,0:4:8.99:0,9,149	0/0:28,0:22:30.03:0,30,430	0/0:40,0:30:42.23:0,42,721	0/0:18,0:18:48.12:0,48,941	0/0:20,0:22:39.12:0,39,709	0/0:18,0:18:36.12:0,36,749	1/1:38,0:37:8.31:459,8,0	0/0:16,0:18:38.60:0,39,680	0/0:17,0:17:22.93:0,23,719	0/0:15,0:15:36.44:0,36,558	0/0:22,0:22:54.09:0,54,950	0/0:19,0:19:48.16:0,48,936	0/0:25,0:26:63.14:0,63,1204	0/0:20,0:21:51.13:0,51,1013	0/0:12,0:13:30.09:0,30,565	0/0:41,0:41:95.44:0,95,1822	0/0:13,0:13:30.03:0,30,562	1/1:15,0:14:20.76:218,21,0	1/1:8,7:15:6.02:186,6,0	1/1:32,0:34:29.87:301,30,0	0/0:14,0:15:42.09:0,42,779	0/0:9,0:9:15.05:0,15,303	0/0:37,0:37:90.21:0,90,1779	0/0:19,0:19:48.13:0,48,894	0/0:26,0:26:16.13:0,16,925	1/1:4,7:12:12.02:267,12,0	0/0:18,0:18:21.59:0,22,924
chr10	32592130	.	T	TTTATTA	5314.81	PASS	AB=0.667;AC=41;AF=0.932;AN=44;BaseQRankSum=-3.304;DP=288;FS=1.715;HRun=0;HaplotypeScore=56.6208;InbreedingCoeff=0.1875;MQ=60.28;MQ0=1;MQRankSum=-3.063;QD=21.52;ReadPosRankSum=0.171;VQSLOD=4.0947;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,6:13:9.03:291,9,0	1/1:3,2:5:3.01:97,3,0	./.	./.	1/1:7,2:11:5.93:114,6,0	1/1:5,5:10:18.06:564,18,0	1/1:7,0:7:5.95:67,6,0	1/1:27,0:27:15.04:260,15,0	1/1:3,3:7:6.02:194,6,0	1/1:5,6:11:21.07:659,21,0	1/1:4,3:7:3.01:97,3,0	1/1:11,0:15:3.01:78,3,0	1/1:6,3:9:3.01:97,3,0	0/1:3,0:6:43.25:43,0,50	0/0:5,0:10:15.05:0,15,210	1/1:4,1:9:5.95:116,6,0	1/1:10,10:20:27.56:865,28,0	1/1:13,0:14:3.01:58,3,0	1/1:16,3:19:12:312,12,0	1/1:8,2:10:6.02:190,6,0	./.	./.	./.	./.	1/1:5,9:14:15.05:466,15,0	1/1:6,0:6:3.01:52,3,0	1/1:8,0:10:18.06:403,18,0	1/1:11,6:17:9.03:292,9,0
chr10	32593192	.	AGTGT	A	2783.36	PASS	AB=0.796;AC=40;AF=0.833;AN=48;BaseQRankSum=-1.752;DP=502;FS=3.566;HRun=0;HaplotypeScore=107.8999;InbreedingCoeff=0.0438;MQ=60.94;MQ0=12;MQRankSum=0.899;QD=6.82;ReadPosRankSum=0.764;VQSLOD=2.2636;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:26:3:28,3,0	1/1:5,2:7:6.02:93,6,0	./.	./.	1/1:14,5:25:23.99:312,24,0	0/1:9,4:15:6.06:108,0,6	0/1:16,2:21:43.43:76,0,43	./.	1/1:10,0:12:6.01:74,6,0	1/1:16,0:18:11.95:98,12,0	1/1:12,8:22:14.84:198,15,0	1/1:4,4:10:12.03:167,12,0	1/1:7,7:14:2.82:46,3,0	1/1:11,13:24:10.97:311,11,0	0/0:11,0:14:14.15:0,14,211	1/1:6,5:12:12.04:185,12,0	0/1:19,8:28:37.74:238,0,38	0/1:17,1:18:25.64:78,0,26	./.	1/1:18,0:24:6.01:56,6,0	1/1:16,0:17:0.34:1,0,0	1/1:8,1:10:8.89:118,9,0	0/1:14,1:18:3.43:65,0,3	1/1:9,4:13:6.02:93,6,0	1/1:7,13:23:8.61:247,9,0	0/1:7,0:10:12.59:13,0,65	1/1:14,0:21:16.17:143,16,0	1/1:9,2:12:14.94:167,15,0
chr10	32597409	.	A	AG	6807.77	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-16.292;DP=683;FS=3.472;HRun=0;HaplotypeScore=83.7927;InbreedingCoeff=0.9999;MQ=85.32;MQ0=0;MQRankSum=-0.574;QD=44.50;ReadPosRankSum=-1.349;VQSLOD=4.6066;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,19:24:65.69:988,66,0	0/0:10,0:10:30.10:0,30,419	0/0:21,0:21:63.19:0,63,862	0/0:28,0:28:81.18:0,81,1086	0/0:27,0:27:72.24:0,72,1005	0/0:25,0:24:75.22:0,75,1015	0/0:19,0:19:54.16:0,54,736	1/1:0,27:27:81.23:1223,81,0	0/0:15,0:15:42.14:0,42,587	0/0:31,0:31:93.30:0,93,1287	0/0:18,0:18:54.18:0,54,754	0/0:29,0:29:78.26:0,78,1090	0/0:27,0:27:81.27:0,81,1132	0/0:26,0:26:78.26:0,78,1090	0/0:30,0:30:87.29:0,87,1217	0/0:40,0:40:99:0,120,1676	0/0:22,0:22:63.21:0,63,880	0/0:14,0:14:41.72:0,42,538	1/1:2,20:22:60.20:958,60,0	1/1:0,29:29:81.28:1293,81,0	1/1:0,22:22:66.23:1055,66,0	0/0:28,0:28:84.24:0,84,1122	0/0:27,0:27:81.27:0,81,1130	0/0:25,0:25:75.23:0,75,1030	0/0:21,0:21:63.21:0,63,881	0/0:25,0:25:75.25:0,75,1049	1/1:0,29:29:81.28:1291,81,0	0/0:22,0:22:66.16:0,66,849
chr10	32598147	.	G	GA	5262.21	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-15.288;DP=670;FS=9.735;HRun=7;HaplotypeScore=59.5144;InbreedingCoeff=0.9964;MQ=82.24;MQ0=0;MQRankSum=-1.412;QD=30.59;ReadPosRankSum=-1.686;VQSLOD=4.2178;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,23:26:60.18:725,60,0	0/0:9,0:9:24.04:0,24,232	0/0:25,0:24:63.05:0,63,590	0/0:14,0:14:18.32:0,18,266	0/0:31,0:31:84.12:0,84,805	0/0:38,0:38:99:0,105,1008	0/0:18,0:18:45.04:0,45,423	1/1:4,30:34:90.26:1074,90,0	0/0:22,0:22:57.09:0,57,550	0/0:24,0:24:57.08:0,57,546	0/0:27,0:27:75.06:0,75,715	0/0:22,0:22:63.09:0,63,603	0/0:33,0:33:93.14:0,93,893	0/0:23,0:23:60.08:0,60,574	0/0:17,0:17:51.08:0,51,492	0/0:23,0:23:60.09:0,60,575	0/0:24,0:24:72.08:0,72,682	0/0:23,0:23:60.09:0,60,579	1/1:2,17:19:51.16:616,51,0	1/1:1,27:28:75.66:890,76,0	1/1:2,24:26:63.19:761,63,0	0/0:23,0:23:57.08:0,57,550	0/0:21,0:21:57.05:0,57,537	0/0:19,0:19:54.07:0,54,515	0/0:26,0:26:78.13:0,78,753	0/0:29,0:29:69.09:0,69,662	1/1:4,35:39:99:1196,99,0	0/0:7,0:7:18.03:0,18,174
chr10	32601603	.	TGTTG	T	3492.81	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=13.959;DP=561;FS=1.481;HRun=0;HaplotypeScore=126.2709;InbreedingCoeff=0.9924;MQ=86.18;MQ0=0;MQRankSum=-12.658;QD=39.25;ReadPosRankSum=-1.840;VQSLOD=3.2699;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,9:10:27.09:416,27,0	0/0:5,0:5:15.04:0,15,373	0/0:21,0:21:62.93:0,63,1566	0/0:18,0:18:50.50:0,50,1225	0/0:29,0:29:87.28:0,87,2405	0/0:25,0:25:75.24:0,75,2064	0/0:21,0:21:63.22:0,63,1753	1/1:3,18:21:60.17:913,60,0	0/0:15,0:15:45.15:0,45,1303	0/0:22,0:22:66.23:0,66,1884	0/0:24,0:23:69.24:0,69,1958	0/0:32,0:32:96.33:0,96,2725	0/0:28,0:28:84.29:0,84,2434	0/0:32,0:32:96.33:0,96,2746	0/0:22,0:22:63.22:0,63,1756	0/0:24,0:24:72.23:0,72,1996	0/0:18,0:18:54.17:0,54,1501	0/0:7,0:7:21.07:0,21,608	1/1:3,9:12:33.10:516,33,0	1/1:7,12:19:38.55:605,39,0	1/1:0,6:6:15.52:219,16,0	0/0:21,0:21:63.22:0,63,1780	0/0:26,0:26:78.27:0,78,2252	0/0:25,0:24:75.21:0,75,1984	0/0:25,0:25:75.26:0,75,2120	0/0:24,0:24:72.25:0,72,2026	1/1:5,16:21:51.17:823,51,0	0/0:8,0:8:24.08:0,24,695
chr10	32601612	.	A	AT	874.93	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=13.386;DP=536;FS=0.989;HRun=0;HaplotypeScore=94.1226;InbreedingCoeff=0.9848;MQ=86.61;MQ0=0;MQRankSum=-13.344;QD=11.22;ReadPosRankSum=-0.413;VQSLOD=4.0680;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,9:9:25.16:116,25,0	0/0:4,0:4:12.04:0,12,167	0/0:19,0:19:54.17:0,54,730	0/0:19,0:19:50.74:0,51,647	0/0:30,0:30:90.30:0,90,1258	0/0:22,0:22:66.22:0,66,922	0/0:20,0:20:60.20:0,60,839	1/1:2,18:21:55.36:347,55,0	0/0:15,0:15:45.15:0,45,629	0/0:23,0:23:69.22:0,69,949	0/0:21,0:20:60.20:0,60,838	0/0:30,0:30:87.29:0,87,1216	0/0:26,0:26:78.26:0,78,1088	0/0:31,0:31:93.30:0,93,1282	0/0:20,0:20:60.20:0,60,839	0/0:24,0:24:72.24:0,72,1007	0/0:21,0:21:63.20:0,63,865	0/0:8,0:8:21.07:0,21,293	1/1:0,9:9:26.63:179,27,0	1/1:4,12:17:31.11:150,31,0	1/1:0,6:6:11.27:55,11,0	0/0:18,0:18:54.18:0,54,754	0/0:26,0:26:75.25:0,75,1048	0/0:25,0:24:75.24:0,75,1033	0/0:23,0:23:69.23:0,69,965	0/0:23,0:23:66.22:0,66,923	1/1:0,14:16:43.79:214,44,0	0/0:10,0:10:30.10:0,30,420
chr10	32601613	.	GCT	G	1290.80	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=13.639;DP=544;FS=0.460;HRun=0;HaplotypeScore=105.1496;InbreedingCoeff=0.9872;MQ=86.93;MQ0=0;MQRankSum=-12.974;QD=16.34;ReadPosRankSum=-0.110;VQSLOD=3.1121;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,9:10:29.64:199,30,0	0/0:4,0:4:12.04:0,12,244	0/0:19,0:19:57.20:0,57,1110	0/0:20,0:20:36.25:0,36,1059	0/0:31,0:31:93.32:0,93,1827	0/0:22,0:22:66.23:0,66,1341	0/0:21,0:21:63.22:0,63,1254	1/1:3,18:21:56.62:415,57,0	0/0:15,0:15:45.15:0,45,914	0/0:22,0:22:66.22:0,66,1309	0/0:21,0:20:60.21:0,60,1218	0/0:31,0:31:93.31:0,93,1779	0/0:26,0:26:78.25:0,78,1525	0/0:31,0:31:93.32:0,93,1883	0/0:20,0:20:60.21:0,60,1218	0/0:26,0:26:78.27:0,78,1565	0/0:21,0:21:63.22:0,63,1280	0/0:9,0:9:27.05:0,27,507	1/1:0,9:9:26.86:204,27,0	1/1:5,12:17:38.08:245,38,0	1/1:0,6:6:12.36:83,12,0	0/0:18,0:18:54.17:0,54,1060	0/0:26,0:26:75.26:0,75,1509	0/0:25,0:24:75.26:0,75,1512	0/0:23,0:23:69.23:0,69,1367	0/0:24,0:24:72.24:0,72,1419	1/1:2,14:16:47.55:332,48,0	0/0:10,0:10:30.10:0,30,610
chr10	32601946	.	AC	A	5177.50	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=11.977;DP=591;FS=12.044;HRun=3;HaplotypeScore=58.1966;InbreedingCoeff=0.9982;MQ=86.15;MQ0=0;MQRankSum=0.540;QD=34.29;ReadPosRankSum=-1.793;VQSLOD=3.6526;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,20:20:54.17:661,54,0	0/0:6,0:6:18.05:0,18,242	0/0:18,0:18:54.17:0,54,756	0/0:21,0:21:63.15:0,63,854	0/0:24,0:23:69.23:0,69,983	0/0:34,0:33:96.31:0,96,1365	0/0:14,0:14:39.13:0,39,561	1/1:0,34:34:99:1251,102,0	0/0:19,0:19:57.18:0,57,798	0/0:24,0:24:69.23:0,69,993	0/0:26,0:26:75.25:0,75,1079	0/0:19,0:19:57.19:0,57,821	0/0:27,0:27:81.23:0,81,1142	0/0:20,0:20:60.20:0,60,863	0/0:27,0:27:78.26:0,78,1122	0/0:22,0:22:66.21:0,66,933	0/0:13,0:13:39.13:0,39,562	0/0:10,0:10:29.46:0,29,395	1/1:0,23:23:69.22:855,69,0	1/1:0,23:23:60.19:736,60,0	1/1:0,19:19:51.16:632,51,0	0/0:15,0:15:45.15:0,45,648	0/0:14,0:14:42.14:0,42,604	0/0:14,0:14:42.14:0,42,605	0/0:33,0:33:96.31:0,96,1366	0/0:16,0:16:48.15:0,48,673	1/1:1,31:32:84.26:1041,84,0	0/0:24,0:24:63.15:0,63,831
chr10	32603482	.	GGTGTGTGTGTGT	G	3616.64	PASS	AB=0.759;AC=30;AF=0.556;AN=54;BaseQRankSum=6.186;DP=554;FS=1.582;HRun=0;HaplotypeScore=179.0848;InbreedingCoeff=0.4394;MQ=69.90;MQ0=8;MQRankSum=-5.912;QD=11.48;ReadPosRankSum=1.686;VQSLOD=2.4624;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:39:24.43:0,24,620	1/1:6,6:12:6.02:206,6,0	0/0:23,0:16:2.94:0,3,18	0/0:31,0:25:2.99:0,3,24	1/1:18,7:25:2.91:102,3,0	0/1:12,10:23:9.28:277,0,9	0/1:12,9:22:40.12:154,0,40	0/0:27,0:26:18.06:0,18,604	1/1:5,10:16:9.50:291,10,0	1/1:12,0:13:3.01:44,3,0	0/0:3,5:8:0:0,0,0	1/1:13,15:28:20.61:664,21,0	1/1:9,10:19:16.30:517,16,0	1/1:11,9:20:3.01:102,3,0	0/0:20,0:20:33.10:0,33,1546	1/1:9,1:17:12.04:175,12,0	1/1:16,6:22:6.01:205,6,0	0/1:13,2:14:73.09:106,0,73	0/0:14,0:14:14.07:0,14,602	0/0:5,0:7:9.03:0,9,366	0/0:39,0:39:42.13:0,42,2154	1/1:5,6:12:9.03:264,9,0	./.	1/1:15,11:26:0.47:1,0,0	1/1:16,5:22:10.59:284,11,0	0/1:14,5:19:16.38:142,0,16	0/0:14,0:20:15.05:0,15,718	1/1:2,0:3:3.01:84,3,0
chr10	32606619	.	AAAATAAAGG	A	4001.22	PASS	AB=1.000;AC=43;AF=0.768;AN=56;BaseQRankSum=-5.745;DP=252;FS=6.654;HRun=0;HaplotypeScore=83.8995;InbreedingCoeff=0.2623;MQ=80.17;MQ0=8;MQRankSum=-3.094;QD=22.23;ReadPosRankSum=-0.613;VQSLOD=1.6084;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:19,0:19:82.14:82,0,99	1/1:2,0:2:3.01:58,3,0	0/0:32,0:19:38.51:0,39,626	0/0:30,0:19:11.74:0,12,128	1/1:0,4:4:6.02:154,6,0	1/1:0,12:12:9.03:241,9,0	1/1:1,4:5:3.01:85,3,0	0/1:28,0:28:83.53:257,0,84	1/1:1,2:3:3.01:86,3,0	1/1:0,9:9:24.01:461,24,0	1/1:0,8:8:18.02:382,18,0	1/1:1,5:6:6.02:171,6,0	1/1:1,3:4:3.01:86,3,0	1/1:0,5:5:15.05:429,15,0	0/0:5,0:5:12.04:0,12,358	1/1:3,0:3:9.03:153,9,0	1/1:11,0:11:15.03:212,15,0	1/1:2,0:2:3.01:37,3,0	0/1:7,0:7:20.94:79,0,21	0/1:9,0:9:0.18:0,0,70	0/0:5,0:5:2.60:0,3,10	1/1:3,0:3:6.02:115,6,0	1/1:3,0:3:3.01:34,3,0	1/1:2,2:4:3.01:37,3,0	1/1:2,9:11:6.02:172,6,0	1/1:0,8:8:21:457,21,0	0/1:11,0:11:33.63:40,0,34	1/1:0,3:3:6.02:172,6,0
chr10	32606624	.	AAAGG	A	4570.28	PASS	AB=0.877;AC=40;AF=0.714;AN=56;BaseQRankSum=2.237;DP=234;FS=37.515;HRun=0;HaplotypeScore=58.1183;InbreedingCoeff=0.1047;MQ=79.12;MQ0=5;MQRankSum=-5.824;QD=22.85;ReadPosRankSum=4.814;VQSLOD=2.1937;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,17:17:45.15:859,45,0	0/1:1,1:2:15.98:52,0,16	0/0:24,0:15:38.26:0,38,632	0/1:26,0:16:15.32:15,0,198	1/1:4,0:4:5.80:43,6,0	1/1:12,0:12:8.86:93,9,0	0/1:5,0:5:41.53:42,0,50	1/1:4,23:27:62.97:1099,63,0	0/1:3,0:3:24.19:24,0,50	1/1:9,0:9:1.73:185,2,0	0/1:8,0:8:2.21:107,0,2	1/1:5,0:5:6.02:94,6,0	0/1:4,0:4:24.26:24,0,44	1/1:5,0:5:15.04:170,15,0	0/0:5,0:5:12.04:0,12,329	0/1:1,2:3:9.46:107,0,9	0/1:8,4:12:85.55:86,0,283	0/0:2,0:2:1.19:0,1,16	1/1:2,5:7:18.06:324,18,0	1/1:3,6:9:18.06:344,18,0	1/1:1,5:6:3.01:58,3,0	1/1:0,4:4:6.02:115,6,0	1/1:1,1:2:3.01:34,3,0	0/0:3,0:3:2.71:0,3,38	1/1:10,0:10:6.01:60,6,0	1/1:8,0:8:20.86:290,21,0	1/1:3,6:9:15.05:287,15,0	1/1:3,0:3:6.01:60,6,0
chr10	32612523	.	A	AT	9074.90	PASS	AB=1.000;AC=51;AF=0.911;AN=56;BaseQRankSum=-5.535;DP=375;FS=1.013;HRun=8;HaplotypeScore=34.2000;InbreedingCoeff=0.5881;MQ=71.70;MQ0=3;MQRankSum=-2.686;QD=25.64;ReadPosRankSum=1.431;VQSLOD=5.0605;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,8:13:24.06:266,24,0	1/1:0,9:9:15.04:173,15,0	0/1:14,0:8:31.75:34,0,32	0/0:12,0:5:11.88:0,12,95	1/1:4,24:28:69.14:779,69,0	1/1:1,14:15:33.10:381,33,0	1/1:0,11:11:21.06:242,21,0	1/1:4,27:31:81.20:904,81,0	1/1:2,9:11:24.07:277,24,0	1/1:3,9:12:27.08:312,27,0	1/1:3,21:24:63.01:692,63,0	1/1:3,8:11:21.06:242,21,0	1/1:1,13:14:36.11:415,36,0	1/1:1,7:8:21.06:242,21,0	0/0:9,0:9:27:0,27,242	1/1:0,12:12:30.09:346,30,0	1/1:3,20:23:42.12:485,42,0	1/1:1,8:9:24.03:262,24,0	1/1:4,8:12:24.06:268,24,0	1/1:2,22:24:65.98:688,66,0	1/1:2,0:2:3.01:35,3,0	1/1:2,0:2:3.01:35,3,0	1/1:4,3:7:9.03:104,9,0	1/1:1,0:1:3.01:35,3,0	1/1:1,13:14:39.12:450,39,0	1/1:1,13:14:39.10:439,39,0	1/1:3,16:19:42.12:485,42,0	1/1:0,14:14:42.12:485,42,0
chr10	32613168	.	AGAGGAGGAGGAGGAGGAG	A	1400.65	PASS	AB=1.000;AC=25;AF=0.500;AN=50;BaseQRankSum=2.575;DP=321;FS=0.000;HRun=0;HaplotypeScore=131.5996;InbreedingCoeff=0.4160;MQ=60.91;MQ0=23;MQRankSum=-0.295;QD=10.30;ReadPosRankSum=-1.002;VQSLOD=2.1665;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,8:20:10.49:346,10,0	0/0:4,0:4:0:0,0,0	./.	./.	0/0:10,0:10:12.02:0,12,179	0/0:14,0:14:12.49:0,12,112	1/1:11,0:9:2.87:32,3,0	1/1:11,0:11:2.98:21,3,0	0/0:11,0:9:0.89:0,1,2	0/1:13,0:13:3.86:41,0,4	0/0:7,0:7:2.99:0,3,24	0/0:9,0:8:0.89:0,1,2	1/1:5,0:5:2.99:23,3,0	1/1:4,0:4:2.22:7,2,0	./.	0/0:9,0:8:3:0,3,25	1/1:10,0:10:6.02:235,6,0	0/0:11,0:8:3.67:0,4,43	1/1:3,8:10:22.29:421,22,0	1/1:4,7:11:6.02:193,6,0	0/0:8,0:6:0:0,0,0	1/1:12,0:11:5.88:51,6,0	0/0:8,0:8:2.27:0,2,12	1/1:15,0:15:2.84:14,3,0	0/0:12,0:12:6.01:0,6,59	0/0:15,0:13:0.23:0,0,42	1/1:5,4:9:3.01:145,3,0	1/1:4,0:3:2.22:7,2,0
chr10	32613215	.	AGGAGGAGGAAG	A	2193.28	PASS	AB=1.000;AC=33;AF=0.611;AN=54;BaseQRankSum=9.163;DP=343;FS=6.406;HRun=0;HaplotypeScore=125.0595;InbreedingCoeff=0.3081;MQ=59.79;MQ0=16;MQRankSum=3.617;QD=8.99;ReadPosRankSum=1.021;VQSLOD=2.0771;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:19,0:19:75.54:76,0,490	1/1:9,0:9:17.64:153,18,0	0/0:17,0:10:12.66:0,13,235	0/0:16,0:9:20.86:0,21,280	1/1:12,1:13:23.17:123,23,0	1/1:18,1:18:23.61:274,24,0	1/1:11,0:8:22.26:138,22,0	0/0:23,0:22:60.20:0,60,1059	1/1:7,0:5:13.31:55,13,0	1/1:13,0:13:7.18:280,7,0	1/1:9,0:9:3.63:33,4,0	0/1:7,0:6:2.55:56,0,3	1/1:3,0:3:6.16:50,6,0	1/1:7,0:7:9.83:65,10,0	0/0:7,0:7:21.07:0,21,381	0/1:9,0:8:6.24:99,0,6	0/1:18,0:18:47.92:146,0,48	./.	0/0:20,0:18:4.87:0,5,611	0/1:21,0:20:5.11:5,0,656	0/0:10,0:9:24.08:0,24,435	1/1:7,1:8:17.65:172,18,0	0/1:12,0:11:2.35:110,0,2	0/1:8,0:8:7.60:29,0,8	1/1:11,1:12:24.32:155,24,0	1/1:15,1:15:21.05:262,21,0	0/1:15,0:15:19.51:20,0,588	0/1:8,0:7:14.94:73,0,15
chr10	32613222	.	GGAA	G	3802.16	PASS	AB=1.000;AC=35;AF=0.648;AN=54;BaseQRankSum=9.292;DP=378;FS=5.005;HRun=0;HaplotypeScore=86.8248;InbreedingCoeff=0.7579;MQ=60.05;MQ0=13;MQRankSum=0.409;QD=16.68;ReadPosRankSum=0.622;VQSLOD=2.9912;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:14.78:0,15,229	1/1:10,0:10:26.51:190,27,0	0/1:21,0:13:3.16:3,0,143	0/0:22,0:12:2.82:0,3,149	1/1:14,0:14:29.90:239,30,0	1/1:18,0:18:52.31:390,52,0	1/1:10,0:7:20.96:172,21,0	0/0:25,0:25:71.81:0,72,634	1/1:9,0:8:23.96:198,24,0	1/1:14,0:14:37.90:322,38,0	1/1:0,10:10:5.82:35,6,0	1/1:8,0:7:20.64:157,21,0	1/1:4,0:4:11.98:98,12,0	1/1:7,0:8:14.92:118,15,0	0/0:7,0:7:20.97:0,21,181	1/1:9,0:8:9.99:146,10,0	0/1:19,0:19:6.04:286,0,6	./.	0/0:20,0:19:37.65:0,38,309	0/0:24,0:23:45.90:0,46,378	0/0:11,0:10:26.93:0,27,225	1/1:11,0:11:26.95:220,27,0	1/1:11,0:10:26.84:211,27,0	1/1:9,0:9:17.93:142,18,0	1/1:16,0:16:32.34:309,32,0	1/1:19,0:18:53.91:467,54,0	0/0:17,0:17:30.63:0,31,327	0/1:8,0:7:3.20:99,0,3
chr10	32614201	.	TTGTGTGTGTG	T	11337	PASS	AB=0.854;AC=47;AF=0.839;AN=56;BaseQRankSum=2.755;DP=500;FS=4.660;HRun=0;HaplotypeScore=138.6569;InbreedingCoeff=0.3970;MQ=63.33;MQ0=17;MQRankSum=-2.052;QD=27.72;ReadPosRankSum=0.900;VQSLOD=4.2392;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:8,4:12:9.03:272,9,0	1/1:2,7:9:18.06:529,18,0	0/0:35,0:15:9:0,9,103	0/0:37,0:14:3.01:0,3,73	1/1:10,9:19:26.96:583,27,0	1/1:11,19:31:39.13:1117,39,0	1/1:10,0:10:2.97:63,3,0	0/1:19,8:27:34.73:325,0,35	1/1:4,10:14:18.06:544,18,0	1/1:8,11:18:30.09:721,30,0	1/1:9,13:22:38.91:789,39,0	1/1:3,9:12:18.06:541,18,0	1/1:8,8:16:15.05:439,15,0	1/1:8,10:18:15.05:453,15,0	0/0:19,0:18:42.13:0,42,1855	1/1:7,11:19:14.92:432,15,0	1/1:8,4:12:5.82:164,6,0	0/1:7,0:7:30.85:31,0,98	0/1:11,4:13:28.21:291,0,28	1/1:6,17:24:47.93:996,48,0	1/1:23,0:21:10.23:162,10,0	1/1:7,0:7:9.01:104,9,0	1/1:1,9:11:24.08:640,24,0	1/1:4,0:4:5.95:42,6,0	1/1:14,12:23:21.07:579,21,0	1/1:10,5:15:20.66:508,21,0	1/1:8,15:23:32.82:919,33,0	1/1:8,6:14:3.01:91,3,0
chr10	32614576	.	C	CA	9746.01	PASS	AB=0.755;AC=50;AF=0.893;AN=56;BaseQRankSum=-6.672;DP=455;FS=0.695;HRun=10;HaplotypeScore=42.1716;InbreedingCoeff=0.4718;MQ=75.07;MQ0=0;MQRankSum=-2.373;QD=22.82;ReadPosRankSum=1.338;VQSLOD=5.4037;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,15:16:39.10:416,39,0	1/1:1,4:5:9.02:96,9,0	0/0:9,0:10:3.89:0,4,75	0/1:6,0:8:25.68:26,0,36	1/1:3,18:21:54.14:575,54,0	1/1:3,21:26:60.70:606,61,0	1/1:1,10:11:27.07:288,27,0	1/1:11,28:39:59.31:754,59,0	1/1:4,10:14:8.44:295,8,0	1/1:4,22:26:69.09:713,69,0	1/1:6,14:21:41.94:428,42,0	1/1:3,22:25:51.13:544,51,0	1/1:3,15:18:20.47:422,20,0	1/1:3,9:12:30.07:314,30,0	0/0:17,0:18:43.97:0,44,351	1/1:0,15:15:39.10:416,39,0	1/1:2,14:16:36.05:371,36,0	1/1:1,3:4:6.02:64,6,0	0/1:7,11:18:40.97:307,0,41	1/1:2,22:25:65.89:650,66,0	1/1:2,5:7:15.04:160,15,0	1/1:1,5:6:15.04:160,15,0	1/1:2,10:12:30.08:319,30,0	1/1:2,5:7:6.02:64,6,0	1/1:1,16:17:42.04:434,42,0	1/1:5,14:19:20.44:413,20,0	1/1:5,21:26:54.14:576,54,0	1/1:1,10:12:32.92:334,33,0
chr10	32614992	.	AACACAC	A	5577.83	PASS	AB=0.667;AC=37;AF=0.685;AN=54;BaseQRankSum=1.680;DP=571;FS=5.993;HRun=0;HaplotypeScore=139.2702;InbreedingCoeff=0.7904;MQ=61.96;MQ0=5;MQRankSum=-5.513;QD=15.85;ReadPosRankSum=3.947;VQSLOD=3.3689;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:31:51.72:0,52,1146	1/1:3,2:5:3.01:62,3,0	./.	0/0:24,0:14:2.14:0,2,84	1/1:26,5:36:17.30:501,17,0	1/1:6,16:24:15.05:267,15,0	1/1:10,11:22:9.03:158,9,0	0/0:25,0:25:26.90:0,27,315	1/1:8,2:11:15.05:247,15,0	1/1:8,13:21:33.69:501,34,0	1/1:5,11:19:24.08:449,24,0	1/1:1,9:15:17.46:244,17,0	1/1:7,10:19:24.54:395,25,0	1/1:11,15:28:21.27:529,21,0	0/0:14,0:16:33.10:0,33,873	1/1:7,11:20:15.05:271,15,0	1/1:20,0:20:18.35:180,18,0	1/1:9,0:9:2.78:62,3,0	0/0:17,0:16:16.87:0,17,382	0/0:22,0:31:21:0,21,431	0/0:16,0:44:38.94:0,39,672	1/1:7,12:19:17.88:308,18,0	1/1:3,10:17:17.86:239,18,0	0/1:11,10:22:4.53:114,0,5	1/1:4,14:19:15.05:291,15,0	1/1:6,17:23:41.17:695,41,0	0/0:13,0:15:33.10:0,33,816	1/1:1,1:2:3.01:62,3,0
chr10	32616513	.	TG	T	19931.35	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=2.352;DP=628;FS=2.099;HRun=2;HaplotypeScore=65.8324;InbreedingCoeff=0.9977;MQ=92.20;MQ0=0;MQRankSum=-10.121;QD=36.04;ReadPosRankSum=6.303;VQSLOD=4.9477;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:0,22:22:63.20:818,63,0	1/1:0,16:16:42.14:545,42,0	0/0:30,0:30:84.25:0,84,1163	0/0:22,0:22:66:0,66,850	1/1:1,36:37:99:1389,108,0	1/1:0,18:18:51.17:662,51,0	1/1:0,12:12:36.12:467,36,0	1/1:2,42:44:99:1594,126,0	1/1:1,18:19:45.15:584,45,0	1/1:0,29:29:87.28:1130,87,0	1/1:1,23:24:72.10:885,72,0	1/1:0,20:20:57.19:740,57,0	1/1:0,30:30:84.27:1091,84,0	1/1:0,17:17:39.13:506,39,0	0/0:23,0:23:69.21:0,69,993	1/1:0,23:23:63.20:818,63,0	1/1:0,18:18:54.17:696,54,0	1/1:0,10:10:21.05:272,21,0	1/1:0,16:16:48.14:609,48,0	1/1:0,19:19:51.16:657,51,0	1/1:0,24:24:72.23:935,72,0	1/1:0,26:26:69.22:896,69,0	1/1:1,17:18:45.15:585,45,0	1/1:0,16:16:45.15:584,45,0	1/1:2,16:18:48.16:623,48,0	1/1:0,39:39:99:1519,117,0	1/1:0,29:29:78.25:1013,78,0	1/1:0,9:9:24.08:312,24,0
chr10	32617550	.	AGAGAGAGAGAGAGAGAGAGAGAGG	A	1587.79	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=5.140;DP=503;FS=34.123;HRun=0;HaplotypeScore=214.6619;InbreedingCoeff=0.2167;MQ=45.72;MQ0=29;MQRankSum=-1.115;QD=6.06;ReadPosRankSum=1.582;VQSLOD=1.5582;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:25,1:24:23.61:479,24,0	0/0:5,0:5:1.82:0,2,5	0/0:29,0:8:24.08:0,24,578	0/0:45,0:10:8.72:0,9,344	0/0:19,0:18:9.03:0,9,178	0/0:26,0:26:34.31:0,34,528	0/1:9,0:11:14.44:14,0,126	1/1:14,0:11:10.56:133,11,0	0/1:13,0:13:48.18:48,0,173	0/0:17,0:15:35.87:0,36,486	0/0:11,0:10:5.62:0,6,62	0/1:21,0:23:99:128,0,185	0/1:16,0:15:37.54:38,0,167	0/1:29,0:29:99:129,0,213	0/0:16,0:16:33.10:0,33,2313	0/1:22,0:22:82.93:170,0,83	0/0:18,0:16:24.48:0,24,344	0/0:8,0:8:21.02:0,21,323	0/1:13,0:12:9.03:152,0,9	1/1:4,4:8:7.57:81,8,0	1/1:18,0:17:11.91:149,12,0	0/0:8,0:8:12:0,12,169	0/0:14,0:14:9.02:0,9,125	0/1:35,0:34:0.63:1,0,227	0/0:12,0:12:23.97:0,24,389	0/0:12,0:12:31.87:0,32,539	1/1:12,10:19:4.53:206,5,0	0/1:12,0:11:34.64:35,0,166
chr10	32617554	.	AGAGAGAGAGAGAGAGAGAGG	A	2546.24	PASS	AB=0.971;AC=24;AF=0.429;AN=56;BaseQRankSum=4.766;DP=500;FS=22.916;HRun=0;HaplotypeScore=182.5738;InbreedingCoeff=-0.2603;MQ=46.35;MQ0=29;MQRankSum=2.343;QD=7.17;ReadPosRankSum=1.224;VQSLOD=1.4610;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:24:13.62:107,14,0	0/0:4,0:4:0:0,0,0	0/0:28,0:9:27.08:0,27,542	0/0:43,0:9:20.29:0,20,289	0/0:19,0:18:5.49:0,5,52	0/1:27,0:27:99:136,0,110	0/1:13,0:12:20.92:113,0,21	0/0:15,0:11:4.85:0,5,49	0/1:14,0:14:61.44:270,0,61	0/1:17,0:15:61.24:104,0,61	0/1:5,6:10:4.21:56,0,4	1/1:22,0:22:20.39:410,20,0	0/1:17,0:16:14.80:171,0,15	0/1:29,0:29:52.11:195,0,52	0/0:14,0:14:30.10:0,30,1869	0/1:22,1:23:9.81:440,0,10	0/1:17,0:15:31.63:32,0,48	0/1:8,0:8:6:6,0,124	0/1:13,0:12:10.34:10,0,37	0/0:7,0:7:2.31:0,2,10	0/1:15,0:14:9.92:10,0,50	0/1:9,0:9:8.90:69,0,9	0/0:15,0:15:2.50:0,2,9	0/1:37,0:36:33.74:131,0,34	0/1:11,1:12:46.69:71,0,47	0/1:12,0:12:99:128,0,111	1/1:21,0:18:2.19:143,2,0	1/1:12,0:11:0.23:100,0,0
chr10	32617556	.	AGAGAGAGAGAGAGAGAGG	A	3627.76	PASS	AB=0.949;AC=39;AF=0.696;AN=56;BaseQRankSum=0.933;DP=501;FS=8.459;HRun=0;HaplotypeScore=168.1195;InbreedingCoeff=0.3414;MQ=46.06;MQ0=30;MQRankSum=3.547;QD=9.60;ReadPosRankSum=0.266;VQSLOD=2.0344;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:23:11.49:11,0,15	1/1:5,0:5:2.68:23,3,0	0/0:28,0:10:29.95:0,30,454	0/0:48,0:9:19.73:0,20,270	1/1:14,5:18:3.01:36,3,0	1/1:27,0:27:9.56:243,10,0	1/1:15,0:14:21.03:256,21,0	0/0:14,0:10:7.75:0,8,61	1/1:12,1:13:10.59:332,11,0	1/1:16,0:14:18.03:212,18,0	1/1:11,0:10:5.19:63,5,0	1/1:11,10:21:7.89:533,8,0	1/1:6,11:16:10.22:202,10,0	0/1:19,10:29:9.24:286,0,9	0/0:14,0:14:27.09:0,27,1618	1/1:7,15:22:12.04:404,12,0	1/1:17,1:16:0.53:88,1,0	0/1:8,0:8:28.94:29,0,53	0/1:13,0:12:1.43:1,0,71	0/0:5,0:5:2.95:0,3,22	0/0:14,0:13:8.15:0,8,69	0/1:9,0:9:15.09:100,0,15	1/1:10,5:15:3.01:36,3,0	1/1:13,24:36:5.91:73,6,0	1/1:12,0:12:10.55:126,11,0	1/1:13,0:13:2.75:274,3,0	1/1:22,0:19:5.17:151,5,0	1/1:8,4:11:0.67:147,1,0
chr10	32617626	.	GGAC	G	1769.82	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=4.325;DP=528;FS=8.956;HRun=0;HaplotypeScore=95.4437;InbreedingCoeff=0.9141;MQ=54.34;MQ0=35;MQRankSum=0.795;QD=15.52;ReadPosRankSum=-2.250;VQSLOD=2.3534;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,22:27:26.95:382,27,0	0/0:3,0:3:6:0,6,89	0/0:48,0:5:8.26:0,8,45	0/0:52,0:12:13.64:0,14,147	0/0:5,0:5:9.03:0,9,132	0/0:19,0:19:33.10:0,33,466	0/0:19,0:18:27.93:0,28,399	1/1:16,0:16:14.34:193,14,0	0/0:16,0:14:29.93:0,30,407	0/0:15,0:14:33.08:0,33,393	0/0:18,0:18:21.07:0,21,308	0/0:18,0:18:22.87:0,23,340	0/0:19,0:19:16.01:0,16,304	0/0:23,0:22:42.05:0,42,508	0/0:18,0:17:47.84:0,48,810	0/0:16,0:16:15.01:0,15,183	0/0:16,0:15:37.01:0,37,541	0/0:11,0:11:24:0,24,295	1/1:10,4:12:15.52:214,16,0	1/1:5,2:6:15.03:179,15,0	1/1:7,29:36:51.17:714,51,0	0/0:14,0:14:42.14:0,42,607	0/0:10,0:10:11.78:0,12,136	0/0:31,0:31:45.14:0,45,639	0/0:14,0:14:20.46:0,20,223	0/0:24,0:23:45.14:0,45,604	1/1:8,5:13:23.83:270,24,0	0/0:5,0:5:9.03:0,9,135
chr10	32619805	.	CACACACACACACACACACACACAG	C	8841.77	PASS	AB=0.991;AC=21;AF=0.375;AN=56;BaseQRankSum=11.333;DP=672;FS=5.307;HRun=0;HaplotypeScore=320.1578;InbreedingCoeff=0.0043;MQ=47.68;MQ0=28;MQRankSum=-4.909;QD=21.94;ReadPosRankSum=7.342;VQSLOD=2.1687;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:42.04:0,42,3747	1/1:10,1:11:20.81:827,21,0	0/0:33,0:7:12.04:0,12,432	0/0:43,0:11:15.05:0,15,491	1/1:35,0:34:12.04:442,12,0	0/1:27,0:27:99:503,0,200	0/1:25,0:25:99:115,0,329	0/0:28,0:27:74.74:0,75,3740	0/1:19,0:19:80.47:379,0,80	1/1:21,1:22:14.59:626,15,0	0/1:21,0:21:34.89:382,0,35	0/1:25,0:25:99:247,0,154	0/1:25,1:26:40.20:706,0,40	0/1:23,0:23:99:476,0,166	0/0:22,0:22:45.57:0,46,3623	0/1:25,1:26:12.81:963,0,13	0/1:30,0:30:28.94:253,0,29	0/1:16,0:14:99:116,0,310	0/0:11,0:11:24.72:0,25,1322	0/0:20,0:19:32.53:0,33,2042	0/0:23,0:22:45.13:0,45,2755	0/1:21,0:21:7.95:903,0,8	1/1:24,0:24:13.71:533,14,0	0/0:22,0:21:0.18:0,0,1	0/1:22,1:23:9.79:1020,0,10	0/1:29,0:29:99:353,0,507	0/0:32,0:31:20.83:0,21,3837	0/0:5,0:4:12.04:0,12,236
chr10	32619807	.	CACACACACACACACACACACAG	C	12036.93	PASS	AB=0.788;AC=28;AF=0.500;AN=56;BaseQRankSum=8.792;DP=667;FS=0.000;HRun=0;HaplotypeScore=286.0315;InbreedingCoeff=0.4877;MQ=47.33;MQ0=29;MQRankSum=-5.113;QD=30.47;ReadPosRankSum=6.165;VQSLOD=2.9425;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:24.66:0,25,3339	1/1:1,10:11:21.07:1070,21,0	0/0:36,0:6:15.05:0,15,423	0/0:42,0:9:18.02:0,18,400	1/1:7,25:31:12.04:626,12,0	0/1:11,15:26:45.45:697,0,45	0/1:11,15:26:99:176,0,164	0/0:27,0:26:73.66:0,74,3140	1/1:5,14:19:9.03:536,9,0	1/1:6,17:23:45.14:870,45,0	1/1:8,13:21:9.03:536,9,0	0/1:9,14:23:7.47:348,0,7	1/1:6,19:25:15.06:873,15,0	0/1:21,1:22:39.79:632,0,40	0/0:22,0:22:45.15:0,45,3286	1/1:6,21:27:21.07:1230,21,0	1/1:6,22:28:6.02:357,6,0	0/1:17,1:16:99:240,0,178	0/0:11,0:11:23.49:0,23,1160	0/0:21,0:20:4.35:0,4,1695	0/0:23,0:22:42.14:0,42,2416	1/1:4,17:21:21.07:1251,21,0	1/1:6,17:23:12.90:717,13,0	0/0:11,10:21:0.07:0,0,0	1/1:5,16:21:24.07:1256,24,0	0/1:27,2:29:99:621,0,113	0/0:32,0:31:17.12:0,17,3352	0/0:6,0:5:12.02:0,12,140
chr10	32619809	.	CACACACACACACACACACAG	C	10493.14	PASS	AB=1.000;AC=36;AF=0.667;AN=54;BaseQRankSum=9.004;DP=663;FS=2.224;HRun=0;HaplotypeScore=272.3213;InbreedingCoeff=0.4446;MQ=47.09;MQ0=30;MQRankSum=-3.585;QD=21.91;ReadPosRankSum=4.612;VQSLOD=3.3049;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:3.85:0,4,2918	1/1:11,0:11:21.05:852,21,0	0/0:40,0:8:21.03:0,21,376	0/0:41,0:8:15.04:0,15,272	1/1:31,0:30:12.04:490,12,0	1/1:26,0:26:15.03:602,15,0	0/1:25,0:25:99:138,0,141	0/1:28,0:27:1.67:2,0,2461	1/1:19,0:19:9.03:434,9,0	1/1:22,0:22:46.30:731,46,0	1/1:19,0:19:9.03:434,9,0	0/1:22,0:22:41.34:280,0,41	1/1:24,0:24:15.17:723,15,0	1/1:9,13:22:15.05:803,15,0	0/0:22,0:22:42.14:0,42,2906	1/1:27,0:27:21.07:1012,21,0	1/1:27,0:27:6.02:289,6,0	0/1:16,0:15:99:238,0,116	0/0:12,0:11:19.72:0,20,1011	0/1:22,0:21:17.65:18,0,1461	0/1:26,0:25:22.37:22,0,2048	1/1:20,0:20:21.07:1012,21,0	1/1:23,0:23:13.03:581,13,0	1/1:19,0:18:0.20:1,0,0	1/1:21,0:21:23.82:1024,24,0	1/1:14,14:28:41.98:808,42,0	0/0:31,0:30:13.21:0,13,2919	./.
chr10	32619827	.	CAG	C	3816.36	PASS	AB=1.000;AC=50;AF=0.893;AN=56;BaseQRankSum=4.174;DP=561;FS=15.629;HRun=0;HaplotypeScore=144.9285;InbreedingCoeff=0.5234;MQ=64.39;MQ0=24;MQRankSum=-5.112;QD=8.24;ReadPosRankSum=2.413;VQSLOD=2.5938;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:33,0:33:12.13:293,12,0	1/1:11,0:11:14.78:95,15,0	0/0:53,0:21:55.74:0,56,494	0/0:45,0:16:28.10:0,28,291	1/1:26,0:25:11.81:75,12,0	1/1:15,0:15:11.82:76,12,0	1/1:17,0:17:1.59:17,2,0	1/1:2,19:20:54.53:366,55,0	1/1:14,0:14:8.87:57,9,0	1/1:18,0:18:45.94:341,46,0	1/1:13,0:13:8.87:57,9,0	1/1:15,0:15:8.79:53,9,0	1/1:20,0:20:14.63:95,15,0	1/1:14,0:14:14.78:96,15,0	0/1:22,0:22:48.35:125,0,48	1/1:22,0:22:20.69:133,21,0	1/1:22,0:23:5.91:38,6,0	1/1:16,0:14:35.02:259,35,0	1/1:10,0:9:9.78:151,10,0	1/1:21,0:20:26.04:296,26,0	1/1:21,0:20:2.25:195,2,0	1/1:17,0:17:20.69:133,21,0	1/1:17,0:17:12.15:77,12,0	0/1:11,0:10:0.01:0,0,0	1/1:17,0:17:20.69:132,21,0	1/1:16,0:16:35.82:278,36,0	1/1:29,0:28:20.23:306,20,0	1/1:4,0:4:8.98:72,9,0
chr10	32622490	.	AAATCAATCAATC	A	3182.62	PASS	AC=10;AF=0.238;AN=42;BaseQRankSum=-3.705;DP=383;FS=1.676;HRun=0;HaplotypeScore=174.3916;InbreedingCoeff=0.6914;MQ=75.42;MQ0=4;MQRankSum=0.249;QD=28.93;ReadPosRankSum=0.761;VQSLOD=3.1073;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:15,10:24:12.04:406,12,0	./.	0/0:44,0:23:9.02:0,9,209	0/0:38,0:27:21.07:0,21,577	0/0:6,0:6:6.02:0,6,182	0/0:9,0:9:12.04:0,12,383	./.	1/1:15,6:21:21.05:332,21,0	0/0:9,0:9:3.01:0,3,56	0/0:14,0:14:12.04:0,12,292	0/0:9,0:9:6.02:0,6,145	./.	0/0:6,0:6:3.01:0,3,91	./.	0/0:19,0:30:36.08:0,36,792	0/0:8,0:8:9.03:0,9,201	0/0:17,0:17:9.03:0,9,301	0/0:10,0:10:11.07:0,11,302	1/1:9,6:15:18.05:481,18,0	1/1:17,10:27:24.05:648,24,0	./.	./.	0/0:7,0:7:3.01:0,3,53	./.	0/0:9,0:9:3.01:0,3,96	0/0:11,0:11:15.05:0,15,391	1/1:4,18:22:45.10:1466,45,0	0/0:7,0:6:3.01:0,3,93
chr10	32622527	.	A	AATAAATAAATAT	6285.59	PASS	AB=1.000;AC=35;AF=0.648;AN=54;BaseQRankSum=7.099;DP=329;FS=44.740;HRun=0;HaplotypeScore=132.4449;InbreedingCoeff=0.7412;MQ=63.18;MQ0=5;MQRankSum=-8.394;QD=47.98;ReadPosRankSum=0.322;VQSLOD=2.2577;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:27.09:0,27,707	1/1:3,0:3:9.02:115,9,0	0/0:35,0:21:38.51:0,39,1333	0/0:33,0:23:51.15:0,51,1531	1/1:11,1:12:27.09:689,27,0	1/1:0,9:11:12.04:725,12,0	1/1:1,0:1:3.01:73,3,0	0/0:22,0:22:57.20:0,57,1764	1/1:2,0:2:5.98:98,6,0	1/1:9,0:9:27.09:759,27,0	1/1:6,0:6:15.05:329,15,0	1/1:1,0:1:3.01:36,3,0	1/1:2,0:2:6.02:123,6,0	1/1:2,0:2:3.01:70,3,0	0/0:22,0:22:48.14:0,48,1323	1/1:7,0:7:15.05:371,15,0	1/1:1,6:10:12.04:600,12,0	1/1:8,0:7:18.06:433,18,0	0/0:17,0:17:44.82:0,45,1294	0/0:21,0:21:56.93:0,57,1455	0/0:9,0:8:15.05:0,15,368	1/1:5,0:5:15.03:197,15,0	1/1:6,0:6:15.05:247,15,0	./.	1/1:1,14:17:6.02:217,6,0	0/1:17,0:17:68.26:1021,0,68	0/0:22,0:22:54.16:0,54,1319	1/1:0,7:11:3.01:182,3,0
chr10	32623086	.	C	CT	17643.03	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-18.317;DP=745;FS=19.809;HRun=4;HaplotypeScore=66.9624;InbreedingCoeff=0.9993;MQ=78.43;MQ0=0;MQRankSum=-3.417;QD=37.30;ReadPosRankSum=5.729;VQSLOD=2.8121;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:78.22:0,78,885	1/1:2,12:14:33.11:442,33,0	0/0:31,0:31:52.51:0,53,773	0/0:20,0:20:54.13:0,54,589	1/1:0,28:28:81.27:1108,81,0	1/1:0,19:19:54.18:739,54,0	1/1:0,26:26:72.24:985,72,0	0/0:40,0:40:99:0,102,1150	1/1:1,27:28:81.27:1108,81,0	1/1:1,28:29:84.27:1131,84,0	1/1:0,24:24:69.23:944,69,0	1/1:1,27:28:78.26:1067,78,0	1/1:0,43:43:99:1557,114,0	1/1:3,35:38:99:1348,99,0	0/0:37,0:37:99:0,111,1238	1/1:2,27:29:69.23:944,69,0	1/1:2,36:38:99:1437,105,0	1/1:1,13:14:39.13:534,39,0	0/0:22,0:22:54.15:0,54,612	0/0:23,0:23:66.19:0,66,749	0/0:33,0:33:90.26:0,90,1021	1/1:0,16:16:48.16:657,48,0	1/1:0,29:29:74.85:1025,75,0	1/1:0,18:18:45.15:616,45,0	1/1:0,17:17:51.17:698,51,0	1/1:2,25:27:75.25:1017,75,0	0/0:38,0:38:99:0,108,1211	1/1:1,7:8:21.07:287,21,0
chr10	32625970	.	CACT	C	6303.28	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=12.774;DP=650;FS=0.776;HRun=0;HaplotypeScore=96.8874;InbreedingCoeff=0.9982;MQ=77.13;MQ0=0;MQRankSum=-1.475;QD=39.89;ReadPosRankSum=2.222;VQSLOD=5.6036;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,42:42:90.31:1587,90,0	0/0:7,0:7:18.06:0,18,425	0/0:16,0:16:48.16:0,48,1021	0/0:15,0:15:42.14:0,42,939	0/0:28,0:28:84.25:0,84,1904	0/0:26,0:26:75.26:0,75,1700	0/0:27,0:27:75.24:0,75,1704	1/1:2,24:26:66.20:1098,66,0	0/0:19,0:19:57.20:0,57,1324	0/0:25,0:25:75.26:0,75,1747	0/0:14,0:14:42.14:0,42,954	0/0:31,0:31:90.29:0,90,2040	0/0:16,0:16:45.15:0,45,1037	0/0:29,0:29:84.29:0,84,1963	0/0:25,0:25:75.26:0,75,1738	0/0:26,0:26:75.26:0,75,1742	0/0:32,0:32:93.32:0,93,2141	0/0:20,0:20:57.20:0,57,1339	1/1:0,14:14:42.09:669,42,0	1/1:0,25:25:60.17:991,60,0	1/1:0,19:19:30.10:529,30,0	0/0:21,0:21:63.22:0,63,1461	0/0:19,0:19:54.17:0,54,1143	0/0:40,0:40:99:0,117,2720	0/0:16,0:16:45.15:0,45,1042	0/0:27,0:27:81.27:0,81,1852	1/1:0,32:32:81.28:1428,81,0	0/0:13,0:13:36.12:0,36,807
chr10	32626109	.	AAACAAC	A	2376.79	PASS	AB=0.997;AC=20;AF=0.357;AN=56;BaseQRankSum=-10.673;DP=614;FS=18.882;HRun=0;HaplotypeScore=249.0328;InbreedingCoeff=-0.0793;MQ=63.62;MQ0=2;MQRankSum=5.175;QD=6.27;ReadPosRankSum=8.028;VQSLOD=0.7433;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:21,0:22:19.48:440,0,19	0/1:10,0:10:44.25:44,0,54	0/0:33,0:31:11.22:0,11,321	0/0:23,0:17:8.95:0,9,171	0/1:37,0:37:99:108,0,180	0/0:26,0:26:25.42:0,25,239	0/1:32,0:32:67.91:68,0,157	1/1:14,5:19:24.07:430,24,0	0/1:17,0:17:2.04:2,0,85	0/0:22,0:22:4.44:0,4,159	0/1:16,0:15:50.14:50,0,68	0/1:23,0:23:57.33:57,0,132	0/1:25,0:25:25.81:26,0,124	0/0:19,0:18:25.13:0,25,146	0/0:19,0:20:51.18:0,51,1574	0/1:22,0:22:2.03:2,0,93	0/0:24,0:25:16.60:0,17,159	0/1:12,0:12:5.78:38,0,6	1/1:20,1:21:5.70:315,6,0	0/1:26,1:26:52.34:237,0,52	1/1:14,0:13:12:192,12,0	0/1:24,0:24:49.56:50,0,115	0/0:19,0:19:25.69:0,26,160	0/0:18,0:18:3.40:0,3,56	0/0:22,0:22:25.23:0,25,159	0/1:32,0:32:61.22:61,0,208	0/1:26,0:26:4.01:421,0,4	0/0:8,0:8:5.19:0,5,22
chr10	32626127	.	C	CA	11024.84	PASS	AB=0.820;AC=34;AF=0.607;AN=56;BaseQRankSum=5.413;DP=595;FS=0.342;HRun=2;HaplotypeScore=202.4779;InbreedingCoeff=0.7319;MQ=41.16;MQ0=8;MQRankSum=-6.814;QD=28.34;ReadPosRankSum=4.719;VQSLOD=4.2317;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:54.96:0,55,606	1/1:9,0:9:27.08:320,27,0	0/0:28,0:19:46.67:0,47,533	0/0:21,0:10:27.07:0,27,307	1/1:22,12:35:99:1116,102,0	1/1:20,9:28:71.68:823,72,0	1/1:17,13:30:84.21:1032,84,0	0/0:25,0:23:61.07:0,61,569	1/1:8,4:12:36.10:427,36,0	1/1:17,6:22:25.24:608,25,0	1/1:13,2:14:41.94:460,42,0	1/1:20,5:25:65.95:730,66,0	1/1:15,1:21:51.14:580,51,0	1/1:14,5:18:51.11:573,51,0	0/0:20,0:20:56.96:0,57,705	1/1:14,5:19:51.13:592,51,0	0/1:18,3:22:77.87:296,0,78	0/1:12,1:14:84.25:279,0,84	0/0:19,0:16:42.56:0,43,422	0/0:26,0:25:67.33:0,67,734	0/0:18,0:17:32.82:0,33,320	1/1:18,5:24:62.64:700,63,0	1/1:14,2:16:45.08:501,45,0	0/1:10,5:16:0.80:347,0,1	1/1:12,1:17:42.12:488,42,0	1/1:28,4:32:81.15:944,81,0	0/0:25,0:25:57.01:0,57,616	0/1:8,2:10:48.99:208,0,49
chr10	32626129	.	AC	A	4810.86	PASS	AB=0.723;AC=33;AF=0.589;AN=56;BaseQRankSum=7.761;DP=597;FS=1.110;HRun=1;HaplotypeScore=227.7142;InbreedingCoeff=0.6372;MQ=41.94;MQ0=10;MQRankSum=-3.993;QD=12.50;ReadPosRankSum=4.609;VQSLOD=4.0700;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,1:24:44.96:0,45,552	1/1:0,9:9:26.44:163,26,0	0/0:28,0:18:48.10:0,48,606	0/0:26,0:13:23:0,23,372	1/1:14,22:36:75.61:413,76,0	1/1:14,15:28:66.99:359,67,0	1/1:16,13:29:76.21:385,76,0	0/0:28,0:26:55.41:0,55,718	1/1:5,7:12:31.31:155,31,0	0/1:14,10:22:17.29:225,0,17	1/1:2,13:14:38.36:194,38,0	1/1:12,14:26:59.93:363,60,0	1/1:4,15:19:48.60:296,49,0	1/1:6,12:17:47.60:269,48,0	0/0:20,0:20:60.20:0,60,919	1/1:7,12:19:49.76:281,50,0	0/1:17,4:21:99:131,0,121	0/1:9,5:14:99:115,0,111	0/0:19,0:16:24.32:0,24,419	0/0:25,0:24:43.40:0,43,825	0/0:18,0:17:30.36:0,30,333	1/1:8,16:23:56.64:293,57,0	1/1:3,12:15:31.11:213,31,0	0/1:8,8:16:10.33:123,0,10	1/1:4,12:16:39.40:224,39,0	1/1:10,23:33:88.99:535,89,0	0/0:24,0:24:42.30:0,42,647	0/1:5,5:10:58.69:76,0,59
chr10	32626130	.	C	CA	11485.28	PASS	AB=0.961;AC=36;AF=0.643;AN=56;BaseQRankSum=4.716;DP=601;FS=0.726;HRun=2;HaplotypeScore=206.5604;InbreedingCoeff=0.6617;MQ=40.07;MQ0=11;MQRankSum=-6.599;QD=27.81;ReadPosRankSum=4.220;VQSLOD=4.3379;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:52.52:0,53,542	1/1:9,0:9:27.08:324,27,0	0/0:26,0:16:30.07:0,30,347	0/0:24,0:11:16.40:0,16,252	1/1:36,0:36:99:1159,102,0	1/1:30,0:29:72.17:857,72,0	1/1:29,0:29:84.23:1058,84,0	0/0:29,0:27:57.11:0,57,447	1/1:12,0:12:36.11:438,36,0	1/1:23,1:23:20.52:604,21,0	1/1:16,0:15:44.16:508,44,0	1/1:24,0:24:57.15:681,57,0	1/1:19,0:19:51.15:594,51,0	1/1:18,0:17:51.15:608,51,0	0/0:21,0:21:56.97:0,57,705	1/1:19,0:19:51.15:612,51,0	0/1:19,1:20:71.32:328,0,71	0/1:13,1:14:60.62:304,0,61	0/0:19,0:16:40.54:0,41,317	0/0:26,0:24:63.91:0,64,536	0/0:18,0:17:26.75:0,27,244	1/1:23,0:23:63.09:749,63,0	1/1:16,0:16:44.97:512,45,0	1/1:17,0:17:2.14:384,2,0	1/1:16,0:16:42.13:501,42,0	1/1:34,0:34:84.38:995,84,0	0/1:22,1:23:15.29:15,0,436	0/1:12,0:12:42.23:254,0,42
chr10	32626132	.	AC	A	4140.39	PASS	AB=0.859;AC=34;AF=0.607;AN=56;BaseQRankSum=7.726;DP=597;FS=3.122;HRun=1;HaplotypeScore=233.3080;InbreedingCoeff=0.5496;MQ=39.40;MQ0=12;MQRankSum=-3.260;QD=9.93;ReadPosRankSum=4.629;VQSLOD=1.8970;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:47.19:0,47,498	1/1:2,8:10:29.39:182,29,0	0/0:20,0:11:29.77:0,30,397	0/1:25,1:11:29.24:29,0,251	1/1:20,17:37:44.93:331,45,0	1/1:18,11:28:45.27:293,45,0	1/1:18,10:28:53.07:283,53,0	0/0:29,0:27:61.23:0,61,742	1/1:7,6:14:19.98:122,20,0	0/1:17,8:22:36.68:169,0,37	1/1:9,7:15:32.88:180,33,0	1/1:12,13:25:48.41:292,48,0	1/1:4,14:18:37.50:277,37,0	1/1:12,7:18:43.49:251,43,0	0/0:21,0:21:63.15:0,63,942	1/1:11,9:20:31.03:250,31,0	0/1:17,2:19:56.21:56,0,141	0/1:11,2:13:87.40:101,0,87	0/0:19,0:16:21.29:0,21,354	0/0:26,0:24:34.69:0,35,635	0/0:17,0:16:24.02:0,24,270	1/1:14,10:23:32.27:239,32,0	1/1:7,9:16:27.35:216,27,0	0/1:11,6:17:15.38:108,0,15	1/1:5,11:16:35.79:209,36,0	1/1:14,19:33:77.51:488,78,0	0/0:23,1:24:18.48:0,18,490	0/1:11,1:12:53.79:64,0,54
chr10	32626133	.	C	CA	3536.88	PASS	AB=0.978;AC=36;AF=0.643;AN=56;BaseQRankSum=11.726;DP=596;FS=5.274;HRun=2;HaplotypeScore=235.8649;InbreedingCoeff=0.0671;MQ=37.39;MQ0=12;MQRankSum=-5.188;QD=6.87;ReadPosRankSum=9.063;VQSLOD=0.3274;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:24:40.11:40,0,79	1/1:10,0:10:12.39:74,12,0	0/0:19,0:10:27.07:0,27,322	0/0:23,0:9:17.67:0,18,202	0/1:37,0:37:3.02:230,0,3	1/1:29,0:28:2.89:177,3,0	1/1:29,0:29:14.75:204,15,0	0/1:28,1:27:60.85:61,0,176	1/1:14,0:14:12.60:82,13,0	0/1:26,0:23:20.66:132,0,21	1/1:16,0:15:18.59:195,19,0	0/1:25,0:25:7.03:98,0,7	1/1:18,0:18:15.62:127,16,0	1/1:21,0:20:27.52:229,28,0	0/0:21,0:21:59.98:0,60,741	0/1:20,0:20:4.75:106,0,5	0/1:18,1:19:99:172,0,105	0/1:12,1:13:68.10:172,0,68	0/1:15,1:14:30.79:96,0,31	1/1:26,0:24:23.41:130,23,0	0/0:17,0:16:9.53:0,10,143	1/1:23,0:22:41.74:301,42,0	1/1:15,0:15:12.11:169,12,0	0/1:19,0:19:12.86:104,0,13	1/1:16,0:16:18.14:130,18,0	1/1:33,0:33:34.50:272,34,0	0/1:24,0:24:21.37:111,0,21	0/1:12,0:12:52.52:126,0,53
chr10	32626135	.	ACAAC	A	4060.72	PASS	AB=0.980;AC=38;AF=0.679;AN=56;BaseQRankSum=7.596;DP=596;FS=12.247;HRun=0;HaplotypeScore=263.0797;InbreedingCoeff=-0.0078;MQ=37.39;MQ0=12;MQRankSum=-5.492;QD=7.65;ReadPosRankSum=3.493;VQSLOD=1.2631;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:22,1:23:37.53:202,0,38	1/1:10,0:10:27.60:138,28,0	0/0:19,0:10:20.24:0,20,390	0/0:23,0:9:16.09:0,16,234	0/1:37,0:37:8.93:280,0,9	0/1:29,0:28:24.50:199,0,24	0/1:28,0:28:79.57:104,0,80	0/1:29,0:27:62.38:192,0,62	1/1:14,0:14:2.31:104,2,0	0/1:26,0:23:38.09:95,0,38	1/1:16,0:15:13.36:163,13,0	1/1:25,0:25:22.38:207,22,0	1/1:18,0:18:31.86:223,32,0	1/1:21,0:20:29.96:208,30,0	0/0:22,0:22:66.22:0,66,1518	1/1:21,0:21:13.41:162,13,0	0/1:19,0:19:46.10:46,0,53	0/1:13,0:13:41.93:78,0,42	0/1:17,0:14:14.45:147,0,14	0/1:25,0:23:40.80:141,0,41	0/1:16,1:16:59.52:90,0,60	1/1:23,0:22:36.86:211,37,0	1/1:16,0:16:17.79:150,18,0	1/1:19,0:19:5.62:72,6,0	1/1:16,0:16:14.83:143,15,0	1/1:33,0:33:58.78:309,59,0	0/1:20,3:24:6.73:266,0,7	1/1:12,0:12:23.17:129,23,0
chr10	32626138	.	AC	A	3870.25	PASS	AB=0.985;AC=43;AF=0.768;AN=56;BaseQRankSum=8.658;DP=580;FS=5.896;HRun=1;HaplotypeScore=230.9401;InbreedingCoeff=0.2341;MQ=38.54;MQ0=12;MQRankSum=-5.512;QD=7.47;ReadPosRankSum=5.606;VQSLOD=1.0756;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:21,1:22:40.76:41,0,53	1/1:10,0:10:26.51:124,27,0	0/0:17,0:9:20.97:0,21,235	0/0:20,2:8:7.17:0,7,150	1/1:37,0:37:32.07:345,32,0	1/1:29,0:28:7.48:240,7,0	1/1:29,0:29:9.51:224,10,0	0/1:27,0:25:37.25:37,0,85	1/1:14,0:14:21.91:149,22,0	1/1:26,0:22:9.30:130,9,0	1/1:16,1:16:27.29:189,27,0	1/1:26,0:26:31.04:201,31,0	1/1:17,0:17:29.33:187,29,0	1/1:19,0:19:52.47:251,52,0	0/0:23,0:23:69.13:0,69,864	1/1:22,0:22:24.59:193,25,0	0/1:15,1:16:14.86:125,0,15	0/1:13,0:13:35.88:79,0,36	0/1:18,0:15:11.57:43,0,12	0/1:24,0:22:16.16:31,0,16	0/1:16,0:15:16.54:17,0,81	1/1:23,0:22:29.40:240,29,0	1/1:17,0:17:36.52:185,37,0	1/1:16,0:16:27.99:134,28,0	1/1:15,0:15:21.27:150,21,0	1/1:32,0:32:79.31:340,79,0	1/1:21,0:21:0.49:57,0,0	1/1:12,0:12:30.92:159,31,0
chr10	32626139	.	CA	C	9576.99	PASS	AB=0.840;AC=40;AF=0.714;AN=56;BaseQRankSum=5.151;DP=576;FS=10.522;HRun=6;HaplotypeScore=211.9756;InbreedingCoeff=0.5149;MQ=38.40;MQ0=12;MQRankSum=-4.542;QD=20.46;ReadPosRankSum=3.446;VQSLOD=2.4589;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:22:19.39:0,19,116	1/1:0,9:10:30.06:302,30,0	0/1:17,0:9:2.60:3,0,175	0/0:19,1:7:19.80:0,20,184	1/1:5,24:36:95.54:916,96,0	1/1:6,16:28:71.99:725,72,0	1/1:6,19:28:48.06:653,48,0	0/0:27,0:25:44.76:0,45,310	1/1:1,9:14:39.07:395,39,0	1/1:7,11:22:35.99:483,36,0	1/1:3,8:16:42.04:410,42,0	1/1:3,16:26:54.01:540,54,0	1/1:1,14:17:48.09:481,48,0	1/1:0,11:19:57.10:573,57,0	0/0:23,0:23:60.17:0,60,764	1/1:1,12:22:48.11:494,48,0	0/1:7,8:16:37.48:278,0,37	0/1:5,5:13:8.61:244,0,9	0/1:17,1:15:29.61:30,0,63	0/1:22,0:22:32.36:53,0,32	0/0:16,0:15:20.03:0,20,158	1/1:1,14:22:58.47:580,58,0	1/1:0,14:17:44.88:439,45,0	1/1:3,6:16:16.02:287,16,0	1/1:1,12:14:39.07:396,39,0	1/1:3,18:33:90.19:912,90,0	0/1:19,2:21:36.01:60,0,36	1/1:1,3:12:18.16:323,18,0
chr10	32626143	.	A	AC	2042.92	PASS	AB=0.970;AC=44;AF=0.786;AN=56;BaseQRankSum=7.905;DP=569;FS=0.000;HRun=0;HaplotypeScore=238.0548;InbreedingCoeff=0.3400;MQ=38.18;MQ0=12;MQRankSum=-3.670;QD=3.98;ReadPosRankSum=0.509;VQSLOD=2.9122;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:19,1:20:26.98:27,0,58	1/1:10,0:10:18.59:53,19,0	0/0:16,0:7:11.52:0,12,204	0/0:20,0:8:21.01:0,21,238	1/1:33,0:33:30.83:126,31,0	1/1:25,0:25:36.10:128,36,0	1/1:25,0:25:19.39:107,19,0	0/1:28,0:26:85.72:108,0,86	1/1:13,0:13:24.74:93,25,0	0/1:25,0:21:0.09:110,0,0	1/1:17,0:16:25.01:77,25,0	1/1:25,0:25:28.52:85,29,0	1/1:16,0:16:24.49:66,24,0	1/1:21,0:20:34.94:173,35,0	0/0:20,0:20:60.19:0,60,822	1/1:22,0:22:29.17:84,29,0	1/1:18,1:19:10.77:120,11,0	0/1:12,1:13:9.18:73,0,9	0/1:19,0:16:5.64:72,0,6	1/1:27,0:25:13.06:106,13,0	0/1:15,1:15:23.38:23,0,102	1/1:22,0:21:27.98:82,28,0	1/1:17,0:17:15.65:56,16,0	1/1:14,1:15:5.08:35,5,0	1/1:15,0:15:26:80,26,0	1/1:34,0:34:60.66:197,61,0	1/1:20,3:23:0.65:73,1,0	1/1:12,0:12:8.15:52,8,0
chr10	32626157	.	A	ACAACAAC	14138.85	PASS	AB=0.997;AC=32;AF=0.571;AN=56;BaseQRankSum=-6.583;DP=612;FS=6.299;HRun=0;HaplotypeScore=257.8807;InbreedingCoeff=-0.3322;MQ=51.86;MQ0=10;MQRankSum=-5.413;QD=25.90;ReadPosRankSum=6.146;VQSLOD=3.6677;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:7,10:23:6.58:592,7,0	0/1:9,0:9:83.17:107,0,83	0/0:21,0:12:30.11:0,30,344	0/0:25,0:14:39.13:0,39,482	0/1:32,0:32:99:792,0,127	0/1:29,0:28:99:489,0,180	0/1:22,0:22:66.88:453,0,67	1/1:3,28:36:99:2152,105,0	0/1:15,0:15:76.60:130,0,77	0/1:30,0:26:33.68:602,0,34	0/1:19,0:18:74.73:387,0,75	0/1:21,0:21:77.92:269,0,78	0/1:15,0:15:99:226,0,110	0/1:26,0:25:81.27:519,0,81	0/0:19,0:19:57.16:0,57,1298	0/1:24,0:24:78.56:228,0,79	0/1:19,0:20:25.85:437,0,26	1/1:12,0:12:3.03:423,3,0	1/1:4,12:22:60.51:985,61,0	1/1:9,3:25:72.22:1510,72,0	1/1:9,1:18:36.06:578,36,0	0/1:22,0:21:96.64:523,0,97	0/1:19,0:19:69.84:386,0,70	0/1:15,0:15:14.66:301,0,15	0/1:21,0:21:99:217,0,138	0/1:33,0:33:99:687,0,125	1/1:3,8:21:39.08:815,39,0	0/1:14,0:14:7.61:330,0,8
chr10	32626500	.	TCTTCCTTCCTTC	T	10994.82	PASS	AB=0.593;AC=35;AF=0.625;AN=56;BaseQRankSum=-2.042;DP=563;FS=7.110;HRun=0;HaplotypeScore=165.9924;InbreedingCoeff=0.6437;MQ=58.34;MQ0=9;MQRankSum=-5.892;QD=31.15;ReadPosRankSum=2.037;VQSLOD=3.7139;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:31:7.68:0,8,719	1/1:3,4:7:12.04:417,12,0	0/0:25,0:12:12.04:0,12,214	0/0:18,0:7:3:0,3,29	1/1:7,25:32:51.13:1476,51,0	1/1:8,17:25:24.08:835,24,0	1/1:8,11:19:9.03:312,9,0	0/0:26,0:26:33.08:0,33,496	1/1:3,12:15:12.04:417,12,0	1/1:4,23:27:59.68:1315,60,0	1/1:2,8:10:15.05:477,15,0	1/1:6,8:14:12.04:399,12,0	1/1:5,19:24:29.61:1029,30,0	0/1:4,13:18:59.06:503,0,59	0/0:1,0:15:27.09:0,27,682	1/1:5,9:13:9.03:313,9,0	1/1:9,17:25:8.86:150,9,0	0/1:6,12:18:31.51:95,0,32	0/0:11,0:15:24.07:0,24,445	0/0:7,0:20:33.05:0,33,686	0/0:11,0:23:15.02:0,15,280	1/1:2,6:8:17.99:538,18,0	1/1:4,5:9:6.02:209,6,0	1/1:11,6:17:2.30:103,2,0	1/1:8,15:23:18.06:626,18,0	1/1:8,18:26:55.37:1378,55,0	0/0:16,0:34:51.13:0,51,1086	0/1:8,10:21:76.52:403,0,77
chr10	32626709	.	ATGTGTG	A	4681.91	PASS	AB=0.741;AC=41;AF=0.788;AN=52;BaseQRankSum=4.416;DP=405;FS=11.321;HRun=0;HaplotypeScore=103.7165;InbreedingCoeff=0.3710;MQ=64.24;MQ0=7;MQRankSum=-3.270;QD=13.69;ReadPosRankSum=0.387;VQSLOD=3.2626;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:19:3.54:7,4,0	1/1:2,1:3:3.01:62,3,0	./.	./.	1/1:5,11:16:21.07:430,21,0	1/1:12,10:22:24.04:431,24,0	1/1:20,10:29:12.04:246,12,0	0/1:29,0:29:34.56:35,0,169	1/1:5,7:14:21.07:411,21,0	1/1:3,6:10:18.06:327,18,0	1/1:4,12:18:25.85:448,26,0	1/1:3,4:7:6.02:123,6,0	1/1:4,5:10:12.04:227,12,0	1/1:8,7:16:9.03:185,9,0	0/0:10,0:10:15.05:0,15,486	1/1:2,8:10:15.05:308,15,0	1/1:9,9:18:12.04:246,12,0	1/1:7,2:9:5.53:122,6,0	0/0:8,0:13:4.38:0,4,47	0/1:5,0:17:0.77:1,0,75	0/1:7,0:16:0.24:0,0,32	1/1:5,4:9:6.02:123,6,0	1/1:4,2:8:9.02:128,9,0	0/0:7,6:13:3.01:0,3,49	1/1:14,5:19:12.04:246,12,0	1/1:5,10:15:27.09:534,27,0	0/1:7,0:20:8.01:8,0,10	0/1:6,0:6:32.87:33,0,148
chr10	32628467	.	CTTATTTATTTATTTAT	C	1478.89	PASS	AB=0.834;AC=6;AF=0.115;AN=52;BaseQRankSum=-2.352;DP=432;FS=11.383;HRun=0;HaplotypeScore=219.0666;InbreedingCoeff=0.1780;MQ=49.56;MQ0=10;MQRankSum=-1.188;QD=12.32;ReadPosRankSum=-1.539;VQSLOD=1.3152;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:10,5:15:4.23:52,0,4	0/0:8,0:8:12.30:0,12,395	./.	0/0:39,0:14:1.47:0,1,6	0/0:14,0:14:6.96:0,7,310	0/0:18,0:18:33.37:0,33,1538	0/0:11,0:11:12.03:0,12,533	1/1:36,0:35:15.02:153,15,0	0/0:14,0:14:21.03:0,21,496	0/0:14,0:13:9.50:0,9,479	0/0:11,0:11:17.83:0,18,676	0/0:11,0:11:8.70:0,9,50	0/0:15,0:15:12.30:0,12,475	0/0:6,0:6:12.04:0,12,718	0/0:7,0:7:6.02:0,6,330	0/0:7,0:7:3.48:0,3,194	0/0:19,0:16:17.98:0,18,971	0/0:14,0:13:21.04:0,21,1215	0/1:18,7:21:74.31:769,0,74	0/1:19,4:23:92.95:438,0,93	./.	0/0:11,0:11:6.49:0,6,244	0/0:13,0:13:7.90:0,8,35	0/0:3,0:3:3.01:0,3,169	0/0:20,0:20:34.14:0,34,978	0/0:11,0:14:15.05:0,15,640	0/1:20,1:21:99:190,0,109	0/0:15,0:13:29.77:0,30,700
chr10	32628468	.	TTATTTA	T	2242.07	PASS	AB=0.982;AC=22;AF=0.393;AN=56;BaseQRankSum=11.329;DP=423;FS=3.793;HRun=0;HaplotypeScore=135.7678;InbreedingCoeff=-0.5274;MQ=49.57;MQ0=10;MQRankSum=-4.822;QD=8.12;ReadPosRankSum=3.138;VQSLOD=2.4659;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:14,0:15:86.84:116,0,87	0/1:8,0:8:35.19:35,0,243	0/0:22,0:7:18.04:0,18,210	0/0:38,0:14:5.65:0,6,154	0/1:14,0:14:99:131,0,127	0/1:18,0:18:45.46:45,0,733	0/1:11,0:11:9.80:10,0,287	0/0:34,0:33:63.08:0,63,883	0/1:14,0:14:99:115,0,157	0/1:14,0:13:99:125,0,195	0/1:10,0:11:61.54:62,0,340	0/1:11,0:11:60.09:60,0,127	0/1:15,0:15:76.87:77,0,282	0/1:6,0:6:36.81:37,0,312	0/0:7,0:7:21.04:0,21,388	0/1:7,0:7:65.30:65,0,82	0/0:18,0:15:16.61:0,17,738	0/0:14,0:13:0.51:0,1,693	0/1:23,1:21:99:444,0,205	1/1:20,1:22:28.35:379,28,0	0/1:5,0:5:31.80:32,0,38	0/1:11,0:11:92.17:102,0,92	0/1:12,0:12:56.99:57,0,114	0/1:3,0:3:39.30:39,0,85	0/1:20,0:20:99:181,0,527	0/0:14,0:14:16.49:0,16,74	0/1:16,3:20:99:279,0,131	0/1:15,0:13:10.92:11,0,131
chr10	32628469	.	T	TTC	3550.74	PASS	AB=0.734;AC=24;AF=0.429;AN=56;BaseQRankSum=9.001;DP=311;FS=7.839;HRun=0;HaplotypeScore=90.7236;InbreedingCoeff=-0.5303;MQ=54.88;MQ0=8;MQRankSum=-5.102;QD=16.83;ReadPosRankSum=2.537;VQSLOD=3.3991;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:12,0:13:99:106,0,128	0/1:3,2:5:74.95:75,0,131	0/0:22,0:7:16:0,16,171	0/0:37,0:14:18.34:0,18,187	0/1:2,6:8:21.07:244,0,21	0/1:11,3:14:99:147,0,139	0/1:5,0:5:9.90:10,0,90	0/0:23,0:22:28.82:0,29,930	0/1:2,7:9:0.47:279,0,0	0/1:3,6:8:73.77:263,0,74	0/1:5,3:8:99:162,0,139	0/1:2,3:5:58.47:117,0,58	0/1:4,4:8:99:152,0,170	0/1:4,2:6:99:119,0,103	0/0:7,0:7:21.06:0,21,314	0/1:1,3:4:4.72:105,0,5	0/1:15,0:13:7.54:8,0,402	0/0:11,0:10:18.35:0,18,377	0/1:15,5:19:99:224,0,270	1/1:6,5:11:19.54:226,20,0	0/1:1,1:3:42.68:51,0,43	0/1:1,6:7:30.85:219,0,31	0/1:3,3:6:99:116,0,128	0/1:2,1:3:39.48:59,0,39	0/1:7,10:17:99:390,0,258	0/1:4,0:6:34.80:35,0,45	0/1:8,7:15:99:308,0,116	0/1:7,1:11:99:136,0,146
chr10	32628471	.	T	TCC	541.31	PASS	AB=0.988;AC=23;AF=0.411;AN=56;BaseQRankSum=9.131;DP=299;FS=16.193;HRun=0;HaplotypeScore=99.7964;InbreedingCoeff=-0.5144;MQ=55.36;MQ0=6;MQRankSum=-6.382;QD=2.69;ReadPosRankSum=0.412;VQSLOD=0.4742;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:12,0:12:46.23:46,0,102	0/1:5,0:5:6.32:6,0,131	0/0:21,0:7:16.10:0,16,139	0/0:34,0:14:19.11:0,19,197	0/1:8,0:8:21.90:39,0,22	0/1:14,0:14:21.28:21,0,310	0/0:4,0:4:11.25:0,11,140	0/0:22,0:21:56.05:0,56,808	0/1:9,0:9:40.52:41,0,48	0/1:7,0:7:48.61:49,0,78	0/1:9,0:9:43.53:44,0,171	0/1:6,0:6:14.73:15,0,104	0/1:8,0:8:16.76:17,0,171	0/1:6,0:6:35.06:35,0,130	0/0:5,0:5:15.05:0,15,245	0/1:4,0:4:27.72:28,0,29	0/1:17,0:14:23.67:24,0,401	0/0:10,0:10:26.45:0,26,397	0/1:18,0:18:21.60:22,0,304	0/1:11,0:11:4.84:5,0,45	0/1:3,0:3:13.40:13,0,42	0/1:6,0:6:32.93:37,0,33	0/1:6,0:6:11.63:12,0,127	0/1:2,0:2:4.39:4,0,43	0/1:17,0:17:57.75:58,0,291	1/1:4,2:6:12.72:114,13,0	0/1:15,0:15:41.62:42,0,141	0/1:8,4:10:31.80:32,0,86
chr10	32628473	.	T	TC	1558.38	PASS	AB=0.725;AC=19;AF=0.339;AN=56;BaseQRankSum=9.503;DP=288;FS=16.462;HRun=0;HaplotypeScore=89.9585;InbreedingCoeff=-0.5185;MQ=56.14;MQ0=3;MQRankSum=-6.058;QD=8.85;ReadPosRankSum=-0.414;VQSLOD=2.4975;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:6.12:0,6,122	0/1:3,2:5:51.12:51,0,110	0/1:17,0:7:3.62:4,0,87	0/0:32,0:14:13.50:0,13,115	0/1:2,6:8:56.01:157,0,56	0/1:10,3:13:56.49:56,0,249	0/0:5,0:5:15.02:0,15,169	0/0:20,0:18:54.18:0,54,751	0/1:2,7:9:19.59:185,0,20	0/1:3,4:7:62.92:120,0,63	0/1:6,3:9:72.03:72,0,169	0/1:3,3:6:78.41:78,0,91	0/1:4,4:8:99:104,0,143	0/1:3,2:5:46.40:46,0,111	0/0:5,0:5:15.04:0,15,193	0/0:4,0:4:6.62:0,7,33	0/0:15,0:12:16.86:0,17,335	0/0:12,0:11:16.98:0,17,325	0/1:14,2:18:74.68:75,0,293	0/1:6,5:11:17.33:61,0,17	0/1:2,0:2:18.97:19,0,36	0/1:2,4:6:23.89:135,0,24	0/1:3,3:6:76.02:76,0,107	0/1:1,1:2:24.93:25,0,36	0/1:7,10:17:99:271,0,242	0/0:6,0:6:17.50:0,17,121	0/1:8,7:15:99:139,0,116	0/1:11,1:10:41.18:41,0,135
chr10	32628477	.	T	TC	890.16	PASS	AB=0.966;AC=18;AF=0.321;AN=56;BaseQRankSum=10.430;DP=272;FS=17.075;HRun=0;HaplotypeScore=87.7780;InbreedingCoeff=-0.3380;MQ=55.39;MQ0=2;MQRankSum=-8.902;QD=5.43;ReadPosRankSum=-0.859;VQSLOD=2.0278;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:9,1:10:4.57:0,5,81	0/1:5,0:5:12.27:12,0,111	0/1:10,1:6:37.42:37,0,50	0/0:26,0:12:14.12:0,14,72	0/1:10,0:10:99:107,0,105	0/1:14,0:14:10.09:10,0,276	0/0:5,0:5:15.04:0,15,187	0/0:18,0:16:48.16:0,48,667	0/1:10,0:10:22.18:72,0,22	0/1:7,0:7:32.20:32,0,92	0/1:8,0:8:16.11:16,0,186	0/1:7,0:7:13.66:14,0,129	0/1:8,0:8:30.06:30,0,144	0/0:5,0:5:5.47:0,5,123	0/0:4,0:4:12.04:0,12,167	0/0:5,0:5:12.01:0,12,115	0/0:14,0:11:30.08:0,30,352	0/0:13,0:12:31.74:0,32,369	0/1:13,2:15:99:125,0,169	1/1:5,6:11:21.36:171,21,0	0/0:1,0:1:3.01:0,3,42	0/1:5,0:5:27.66:47,0,28	0/1:6,0:6:43.81:44,0,107	0/1:2,0:2:12.09:12,0,36	0/1:17,0:17:88.91:89,0,244	0/0:6,0:6:17.63:0,18,130	0/1:7,8:15:94.21:223,0,94	0/1:13,0:11:9.23:9,0,141
chr10	32633145	.	AC	A	10110.57	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=11.604;DP=538;FS=5.882;HRun=6;HaplotypeScore=53.7434;InbreedingCoeff=0.9780;MQ=82.22;MQ0=0;MQRankSum=-1.286;QD=29.05;ReadPosRankSum=4.447;VQSLOD=5.3720;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:42.14:0,42,553	1/1:0,3:3:6.02:64,6,0	0/0:15,0:15:41.50:0,41,513	0/0:15,0:15:39.12:0,39,502	1/1:3,24:27:72.18:774,72,0	1/1:0,28:28:84.21:903,84,0	1/1:0,11:11:30.08:322,30,0	0/0:34,0:34:90.28:0,90,1172	1/1:1,17:18:51.13:548,51,0	1/1:2,25:27:75.16:793,75,0	1/1:1,40:41:99:1257,117,0	1/1:0,11:11:24.06:258,24,0	1/1:2,17:19:51.13:548,51,0	1/1:0,17:17:45.11:484,45,0	0/0:20,0:20:60.18:0,60,776	1/1:0,17:17:45.11:484,45,0	1/1:0,13:13:36.09:387,36,0	1/1:0,12:12:30.08:322,30,0	0/0:22,0:22:57.19:0,57,750	0/0:29,0:29:87.27:0,87,1130	0/0:12,0:12:30.10:0,30,395	1/1:0,21:21:60.15:645,60,0	1/1:0,18:18:48.12:516,48,0	1/1:0,4:4:12.03:129,12,0	1/1:2,25:27:72.18:774,72,0	1/1:3,20:23:60.15:644,60,0	0/0:28,0:28:78.25:0,78,1026	1/1:2,9:11:24.06:258,24,0
chr10	32636086	.	G	GTGTATGTATGTATGTATGTA	24073.20	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=5.012;DP=851;FS=4.891;HRun=0;HaplotypeScore=375.9696;InbreedingCoeff=0.6950;MQ=49.84;MQ0=9;MQRankSum=-6.278;QD=32.05;ReadPosRankSum=-0.965;VQSLOD=2.1701;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:7,0:26:20.88:391,21,0	1/1:15,0:15:24.08:1351,24,0	0/0:30,0:22:21.03:0,21,237	0/0:26,0:14:11.69:0,12,88	1/1:13,24:56:6.02:556,6,0	1/1:28,0:28:36.08:1337,36,0	1/1:25,0:25:33.03:1127,33,0	1/1:51,0:49:66.02:1108,66,0	1/1:32,0:32:30.06:1626,30,0	1/1:34,0:33:65.76:1910,66,0	1/1:32,0:32:27.03:975,27,0	1/1:6,17:32:6.02:517,6,0	1/1:42,0:42:48.12:1951,48,0	1/1:45,0:45:45.11:2802,45,0	0/0:43,0:43:99:0,102,4254	1/1:13,7:27:3.01:279,3,0	1/1:14,1:15:8.87:525,9,0	1/1:10,0:10:2.13:113,2,0	1/1:10,0:19:26.91:388,27,0	1/1:15,0:44:18.43:260,18,0	1/1:8,0:14:6.02:167,6,0	1/1:6,0:24:6.49:346,6,0	1/1:35,0:36:45.07:2093,45,0	1/1:11,0:11:2.86:23,3,0	1/1:40,0:40:24.04:1195,24,0	1/1:36,0:36:57.01:2404,57,0	1/1:12,0:42:44.72:387,45,0	1/1:14,0:14:16.82:243,17,0
chr10	32636669	.	CA	C	8197	PASS	AB=0.933;AC=37;AF=0.661;AN=56;BaseQRankSum=-12.683;DP=626;FS=7.671;HRun=10;HaplotypeScore=93.1507;InbreedingCoeff=0.9088;MQ=70.33;MQ0=0;MQRankSum=1.887;QD=20.44;ReadPosRankSum=5.946;VQSLOD=4.8733;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:25:36.97:0,37,201	1/1:2,9:11:26.99:234,27,0	0/0:29,0:23:35.50:0,35,318	0/1:13,1:12:5.04:5,0,161	1/1:4,31:35:89.92:774,90,0	1/1:7,34:41:89.96:781,90,0	1/1:3,14:18:41.02:345,41,0	0/0:15,0:37:73.14:0,73,419	1/1:2,20:22:36.42:471,36,0	1/1:4,26:30:74.97:651,75,0	1/1:5,13:18:35.93:305,36,0	1/1:1,14:15:38.99:339,39,0	1/1:2,30:32:74.98:651,75,0	1/1:2,10:13:32.03:266,32,0	0/0:24,0:24:60.14:0,60,648	1/1:2,25:27:32.80:514,33,0	1/1:1,7:8:20.99:182,21,0	1/1:0,7:7:21:182,21,0	0/0:8,0:25:49.99:0,50,291	0/0:3,0:36:90.20:0,90,480	0/0:4,0:12:22.73:0,23,115	1/1:1,16:17:44.98:391,45,0	1/1:0,19:19:50.99:443,51,0	1/1:5,17:22:50.99:443,51,0	1/1:3,26:29:74.98:651,75,0	1/1:1,22:23:65.96:568,66,0	0/0:11,0:35:45.05:0,45,256	0/0:0,1:1:0:0,0,0
chr10	32637837	.	TA	T	6382.85	PASS	AB=0.744;AC=50;AF=0.893;AN=56;BaseQRankSum=-2.896;DP=408;FS=10.220;HRun=11;HaplotypeScore=66.0855;InbreedingCoeff=0.6740;MQ=75.33;MQ0=1;MQRankSum=-1.776;QD=16.62;ReadPosRankSum=5.128;VQSLOD=5.1762;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,22:28:27.57:365,28,0	1/1:1,5:6:14.98:123,15,0	0/0:14,0:15:35.81:0,36,328	0/1:14,1:10:2.86:8,0,3	1/1:3,17:20:44.92:369,45,0	1/1:5,13:19:43.97:350,44,0	0/1:2,9:11:5.73:169,0,6	1/1:15,13:28:15.43:250,15,0	1/1:6,12:18:35.88:289,36,0	1/1:1,14:16:40.97:326,41,0	1/1:1,10:11:26.97:222,27,0	1/1:2,8:10:23.96:197,24,0	1/1:2,12:14:32.95:271,33,0	1/1:1,7:9:20.01:154,20,0	0/0:9,0:9:25.30:0,25,252	1/1:1,12:13:26.94:221,27,0	1/1:1,12:13:35.96:296,36,0	1/1:1,11:12:26.96:221,27,0	1/1:3,16:19:44.92:367,45,0	1/1:1,13:14:35.93:292,36,0	1/1:3,5:8:14.98:123,15,0	1/1:2,17:19:47.89:388,48,0	1/1:2,9:12:26.01:203,26,0	1/1:3,7:10:6.98:71,7,0	1/1:2,13:15:35.96:295,36,0	1/1:3,14:17:41.93:342,42,0	1/1:6,14:21:46.91:372,47,0	1/1:1,4:5:11.97:99,12,0
chr10	32637900	.	TCACACACACACA	T	1471.18	PASS	AB=0.823;AC=13;AF=0.283;AN=46;BaseQRankSum=2.533;DP=344;FS=19.769;HRun=0;HaplotypeScore=144.1088;InbreedingCoeff=0.0363;MQ=36.69;MQ0=21;MQRankSum=-3.644;QD=11.58;ReadPosRankSum=-0.114;VQSLOD=1.2636;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:15:3.01:0,3,135	./.	./.	./.	0/0:10,4:19:2.60:0,3,18	1/1:10,1:10:2.69:99,3,0	0/0:10,1:8:0.47:0,0,1	0/0:26,0:25:18.06:0,18,489	0/1:7,2:11:11.45:115,0,11	0/1:14,1:14:18.31:94,0,18	./.	0/1:12,2:13:7.22:287,0,7	0/1:15,1:19:14.20:281,0,14	0/0:6,1:9:5.72:0,6,24	0/0:15,0:15:32.93:0,33,1343	1/1:8,1:10:6.02:193,6,0	1/1:12,1:13:3.01:101,3,0	0/0:4,0:4:2.37:0,2,8	0/0:11,0:9:12.51:0,13,348	0/0:7,0:6:3.01:0,3,141	0/0:14,0:12:6.02:0,6,304	0/1:13,0:17:7.56:66,0,8	./.	0/0:13,1:12:2.81:0,3,20	0/0:6,5:14:0.47:0,0,1	0/1:6,1:9:36.35:268,0,36	0/0:17,0:14:18.06:0,18,776	0/1:5,1:5:95.30:95,0,116
chr10	32638577	.	TA	T	9049.33	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=1.816;DP=609;FS=4.835;HRun=12;HaplotypeScore=67.7690;InbreedingCoeff=0.8607;MQ=75.95;MQ0=0;MQRankSum=-1.795;QD=16.60;ReadPosRankSum=3.532;VQSLOD=6.1069;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,26:31:43.49:509,43,0	1/1:1,9:10:23.91:186,24,0	0/0:15,0:14:18.02:0,18,170	0/0:13,1:14:8.87:0,9,80	1/1:5,23:28:59.72:464,60,0	1/1:4,13:17:38.84:302,39,0	1/1:4,12:16:5.40:225,5,0	1/1:8,23:31:59.69:464,60,0	1/1:4,19:24:52.83:401,53,0	1/1:5,24:30:43.31:509,43,0	1/1:3,22:26:58.75:445,59,0	1/1:1,15:17:40.87:308,41,0	1/1:6,22:28:62.74:488,63,0	1/1:3,14:18:40.84:303,41,0	0/0:31,0:35:73.87:0,74,748	1/1:3,24:27:68.71:534,69,0	1/1:4,19:23:53.77:418,54,0	1/1:5,4:10:17.42:124,17,0	1/1:5,9:15:28.92:215,29,0	1/1:3,21:25:58.78:446,59,0	1/1:4,16:20:32.84:255,33,0	1/1:2,10:13:25.89:192,26,0	1/1:4,20:25:52.80:400,53,0	1/1:5,21:26:1.88:380,2,0	1/1:4,25:29:68.71:534,69,0	1/1:5,20:25:56.72:438,57,0	1/1:2,20:22:50.80:395,51,0	1/1:3,6:9:14.93:116,15,0
chr10	32639855	.	T	TAC	3125.38	PASS	AB=0.778;AC=46;AF=0.852;AN=54;BaseQRankSum=2.893;DP=617;FS=0.000;HRun=0;HaplotypeScore=173.1293;InbreedingCoeff=0.1535;MQ=56.70;MQ0=8;MQRankSum=-3.194;QD=5.95;ReadPosRankSum=-0.178;VQSLOD=2.9398;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:26,6:34:15.31:170,0,15	1/1:7,0:6:3:28,3,0	0/0:30,0:21:2.59:0,3,10	./.	1/1:26,0:26:2.79:26,3,0	1/1:31,0:31:20.01:149,20,0	1/1:26,0:26:14.28:127,14,0	0/1:25,2:27:63.86:102,0,64	1/1:8,0:10:8.80:65,9,0	1/1:25,0:24:12.30:88,12,0	1/1:20,0:20:14.37:124,14,0	1/1:11,0:11:2.79:26,3,0	1/1:26,0:26:15.01:140,15,0	1/1:20,0:20:9:78,9,0	0/0:28,0:30:44.48:0,44,424	1/1:31,0:29:17.14:121,17,0	1/1:24,0:24:11.74:87,12,0	1/1:9,0:9:5.65:51,6,0	0/1:8,7:16:5.02:192,0,5	1/1:9,15:25:36.12:540,36,0	0/1:14,5:23:67.05:195,0,67	1/1:14,0:14:18.01:175,18,0	1/1:15,0:16:8.95:78,9,0	1/1:21,0:24:2.54:26,3,0	1/1:17,0:18:8.99:78,9,0	1/1:20,0:20:22.13:206,22,0	1/1:13,14:29:0.88:337,1,0	1/1:11,0:11:6:52,6,0
chr10	32644055	.	T	TA	14699.84	PASS	AC=50;AF=0.926;AN=54;BaseQRankSum=-6.170;DP=516;FS=0.825;HRun=7;HaplotypeScore=42.4686;InbreedingCoeff=0.9330;MQ=63.15;MQ0=0;MQRankSum=-0.024;QD=30.37;ReadPosRankSum=0.620;VQSLOD=4.9277;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,17:18:42.08:490,42,0	1/1:3,7:10:15.05:181,15,0	./.	0/0:7,0:6:6:0,6,56	1/1:1,27:28:78.20:926,78,0	1/1:1,19:20:54.17:652,54,0	1/1:0,17:17:45.03:524,45,0	1/1:5,29:34:84.23:990,84,0	1/1:0,16:16:45.14:544,45,0	1/1:3,23:27:72.21:857,72,0	1/1:3,20:23:60.06:689,60,0	1/1:1,15:16:39.12:471,39,0	1/1:3,21:24:63.19:761,63,0	1/1:4,17:21:51.14:603,51,0	0/0:21,0:21:60.06:0,60,567	1/1:1,24:25:69.21:834,69,0	1/1:1,21:22:57.17:688,57,0	1/1:5,10:15:24.07:290,24,0	1/1:1,12:13:33.10:399,33,0	1/1:2,19:21:52.40:619,52,0	1/1:1,14:15:33.10:399,33,0	1/1:0,9:9:27.08:326,27,0	1/1:2,14:17:39.12:470,39,0	1/1:0,15:15:42.13:507,42,0	1/1:1,21:22:60.18:725,60,0	1/1:2,22:24:59.21:788,59,0	1/1:5,14:20:48.14:569,48,0	1/1:1,11:12:33.10:399,33,0
chr10	32644691	.	A	AGCAGCT	7509.14	PASS	AC=42;AF=0.913;AN=46;BaseQRankSum=-2.196;DP=438;FS=12.530;HRun=0;HaplotypeScore=95.3713;InbreedingCoeff=0.4607;MQ=60.51;MQ0=0;MQRankSum=-4.422;QD=21.15;ReadPosRankSum=-1.289;VQSLOD=2.9128;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:32:3.01:0,3,42	1/1:10,0:10:0.89:2,1,0	./.	./.	./.	1/1:20,0:20:6.01:63,6,0	1/1:20,7:28:33.11:1033,33,0	1/1:27,0:27:6.74:37,7,0	1/1:6,6:12:21.07:685,21,0	1/1:13,0:13:6.01:57,6,0	1/1:11,0:11:1.06:2,1,0	1/1:8,11:20:18.06:587,18,0	1/1:8,9:17:18.06:588,18,0	1/1:1,14:16:30.10:978,30,0	0/0:19,0:19:45.15:0,45,912	1/1:11,8:21:21.07:686,21,0	1/1:11,14:26:18.06:588,18,0	1/1:10,12:22:39.13:1276,39,0	1/1:16,0:16:3:27,3,0	./.	1/1:7,0:7:3.01:50,3,0	1/1:18,0:18:5.48:31,5,0	1/1:12,0:12:2.99:24,3,0	1/1:10,0:10:8.99:138,9,0	1/1:14,0:14:6.02:142,6,0	1/1:16,0:16:3:27,3,0	1/1:8,9:19:14.65:490,15,0	./.
chr10	32645969	.	A	AAAGG	12888.23	PASS	AB=1.000;AC=48;AF=0.857;AN=56;BaseQRankSum=-0.368;DP=747;FS=1.435;HRun=0;HaplotypeScore=229.4960;InbreedingCoeff=0.6280;MQ=62.13;MQ0=1;MQRankSum=-0.971;QD=18.90;ReadPosRankSum=-0.990;VQSLOD=4.1421;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,16:28:39.82:884,40,0	1/1:11,0:11:6.56:191,7,0	0/0:20,0:18:2.94:0,3,18	0/0:23,0:21:11.40:0,11,131	1/1:25,0:22:14.80:295,15,0	1/1:29,0:29:45.09:497,45,0	1/1:23,0:21:10.90:208,11,0	1/1:34,0:33:40.31:623,40,0	1/1:27,0:27:20.57:388,21,0	1/1:27,0:26:40.21:432,40,0	1/1:22,0:24:38.80:540,39,0	1/1:37,0:37:43.77:551,44,0	1/1:36,0:40:51.84:895,52,0	1/1:48,0:45:84.97:1072,85,0	0/0:22,0:22:42.10:0,42,625	1/1:35,0:34:40.55:541,41,0	0/1:23,0:22:5.64:287,0,6	1/1:11,0:11:16.93:193,17,0	1/1:11,4:15:15:261,15,0	1/1:15,24:41:78.10:1610,78,0	1/1:7,15:22:27.09:650,27,0	1/1:36,0:36:22.11:346,22,0	1/1:21,0:28:36.38:390,36,0	1/1:19,0:19:24.23:269,24,0	0/1:38,0:36:9.22:387,0,9	1/1:25,0:25:32.92:561,33,0	1/1:9,13:21:24.08:578,24,0	1/1:10,0:10:21.01:238,21,0
chr10	32645997	.	GGAGAAAGAAAGA	G	5668.72	PASS	AB=0.954;AC=21;AF=0.375;AN=56;BaseQRankSum=6.141;DP=811;FS=17.306;HRun=0;HaplotypeScore=284.1601;InbreedingCoeff=-0.6006;MQ=48.11;MQ0=14;MQRankSum=-2.850;QD=8.72;ReadPosRankSum=-5.552;VQSLOD=1.4430;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:57.82:0,58,3371	0/1:18,0:18:96.33:96,0,1618	0/0:22,0:4:8.96:0,9,202	0/0:28,0:11:32.47:0,32,901	0/1:34,0:31:99:179,0,2341	0/1:32,0:32:99:282,0,2926	0/1:22,0:20:47.24:47,0,2152	0/1:38,0:36:99:137,0,1842	0/1:18,0:27:8.45:8,0,2066	0/1:23,11:33:99:487,0,2437	0/1:33,0:33:99:453,0,2401	0/1:38,0:39:99:250,0,3052	0/1:38,0:38:99:290,0,2168	0/1:46,0:44:99:637,0,3316	0/0:20,0:20:60.16:0,60,2538	0/1:38,0:37:99:476,0,2609	0/1:21,0:21:99:397,0,1062	0/1:11,0:12:99:232,0,331	0/0:8,0:7:14.91:0,15,356	0/1:34,0:34:67.14:67,0,2621	0/0:22,0:22:48.16:0,48,1908	0/1:26,13:39:22.64:23,0,2222	0/1:32,0:31:99:425,0,1868	0/1:20,0:20:99:264,0,720	0/1:40,0:38:99:399,0,3526	0/1:26,0:25:99:404,0,2392	0/0:22,0:22:54.18:0,54,2391	0/1:23,0:23:99:116,0,2002
chr10	32648371	.	TCA	T	2043.87	PASS	AB=0.826;AC=45;AF=0.833;AN=54;BaseQRankSum=3.924;DP=569;FS=4.825;HRun=0;HaplotypeScore=106.9599;InbreedingCoeff=0.2099;MQ=66.42;MQ0=4;MQRankSum=-0.979;QD=4.28;ReadPosRankSum=-0.574;VQSLOD=2.2683;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:26:11.04:56,11,0	1/1:1,2:3:3:29,3,0	0/0:29,0:26:0.47:0,0,1	0/0:26,0:17:0:0,0,0	1/1:10,4:14:11.87:100,12,0	1/1:11,10:20:12.03:130,12,0	1/1:11,4:16:5.85:47,6,0	0/0:18,0:18:5.65:0,6,31	1/1:4,4:8:9.02:98,9,0	1/1:14,4:17:3:33,3,0	0/1:14,5:19:22.59:92,0,23	1/1:7,0:16:15.45:72,15,0	1/1:8,0:32:31.25:154,31,0	1/1:9,0:19:17.04:84,17,0	0/1:27,2:29:17.40:17,0,503	1/1:16,11:27:20.78:207,21,0	1/1:15,3:19:26.72:230,27,0	0/1:14,7:21:32.32:80,0,32	1/1:19,0:26:7.99:29,8,0	1/1:20,0:25:14.29:73,14,0	1/1:8,0:12:2.84:14,3,0	1/1:8,0:17:14.20:70,14,0	1/1:18,0:25:25.57:126,26,0	./.	1/1:11,6:17:6:55,6,0	1/1:26,1:26:15.75:140,16,0	1/1:11,0:22:19.95:99,20,0	1/1:8,7:15:12.03:130,12,0
chr10	32649015	.	AACACACACAC	A	1325.83	PASS	AB=0.921;AC=26;AF=0.722;AN=36;BaseQRankSum=0.066;DP=506;FS=10.492;HRun=0;HaplotypeScore=132.4787;InbreedingCoeff=0.0097;MQ=64.92;MQ0=25;MQRankSum=0.595;QD=4.77;ReadPosRankSum=-0.145;VQSLOD=1.2538;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:34,0:33:49.09:49,0,79	1/1:8,0:8:1.34:54,1,0	./.	./.	1/1:13,0:13:3.01:68,3,0	1/1:14,0:15:5.38:78,5,0	./.	./.	1/1:18,0:21:6.76:206,7,0	./.	1/1:9,1:10:5.97:47,6,0	./.	0/0:10,0:10:0.89:0,1,2	0/0:18,0:16:3:0,3,25	0/0:18,0:17:3.01:0,3,145	0/1:11,3:14:12.20:82,0,12	1/1:24,0:23:9.02:145,9,0	0/1:14,0:13:99:132,0,143	./.	./.	1/1:32,0:30:3.01:21,3,0	./.	0/1:11,0:12:32.50:115,0,32	1/1:20,0:20:3.01:61,3,0	1/1:15,3:18:6.02:157,6,0	1/1:19,4:21:8.94:146,9,0	1/1:15,0:13:5.93:80,6,0	./.
chr10	32650604	.	A	AGTGT	8504.30	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-12.825;DP=875;FS=1.624;HRun=0;HaplotypeScore=149.7841;InbreedingCoeff=0.9757;MQ=63.76;MQ0=8;MQRankSum=-1.454;QD=35.88;ReadPosRankSum=0.119;VQSLOD=4.9956;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,20:34:6.74:1074,7,0	0/0:8,0:9:24.08:0,24,378	0/0:43,0:14:20.41:0,20,279	0/0:44,0:25:26.70:0,27,392	0/0:22,0:22:51.64:0,52,843	0/0:19,0:19:51.17:0,51,849	0/0:39,0:40:72.17:0,72,1134	1/1:17,16:36:60.09:1087,60,0	0/0:20,0:21:60.20:0,60,967	0/0:32,0:32:69.20:0,69,1040	0/0:11,0:11:30.09:0,30,474	0/0:30,0:30:75.25:0,75,1234	0/0:29,0:29:63.16:0,63,1013	0/0:39,0:39:90.25:0,90,1436	0/0:39,0:40:93.31:0,93,1526	0/0:55,0:55:99:0,138,2219	0/0:36,0:36:50.16:0,50,1017	0/0:17,0:17:45.09:0,45,717	1/1:7,16:24:50.98:1109,51,0	1/1:7,19:26:45.63:1110,46,0	1/1:18,52:77:99:2394,104,0	0/0:22,0:22:51.16:0,51,825	0/0:12,0:13:33.08:0,33,499	0/0:32,0:32:66.21:0,66,1073	0/0:39,0:39:99:0,104,1674	0/0:33,0:33:78.26:0,78,1276	1/1:3,35:38:22.86:1729,23,0	0/0:8,0:8:15.05:0,15,250
chr10	32651827	.	T	TCA	2235.60	PASS	AB=0.990;AC=32;AF=0.640;AN=50;BaseQRankSum=0.931;DP=514;FS=0.743;HRun=0;HaplotypeScore=82.7611;InbreedingCoeff=-0.3158;MQ=62.81;MQ0=19;MQRankSum=2.759;QD=5.16;ReadPosRankSum=0.133;VQSLOD=2.6796;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:31,0:31:34.21:36,0,34	0/1:10,0:10:26.79:39,0,27	./.	./.	0/1:29,0:29:14.94:15,0,57	0/1:21,0:20:17.22:129,0,17	0/1:24,1:24:20.92:108,0,21	1/1:26,0:26:3.01:44,3,0	0/1:10,0:9:14.94:137,0,15	0/1:26,0:26:59.20:271,0,59	1/1:14,0:11:8.72:124,9,0	0/1:17,1:16:43.86:113,0,44	1/1:8,8:16:6.02:73,6,0	0/1:15,0:14:33.92:99,0,34	0/0:15,0:15:18.05:0,18,198	1/1:13,0:12:3:45,3,0	0/1:32,0:30:14.86:192,0,15	0/0:16,0:13:24.02:0,24,250	0/1:15,0:13:14.27:22,0,14	1/1:21,0:19:2.20:170,2,0	1/1:16,0:14:9.03:117,9,0	./.	1/1:16,0:14:6.02:87,6,0	1/1:18,0:16:9.03:135,9,0	1/1:12,0:12:3.01:45,3,0	0/1:18,0:18:8.96:209,0,9	0/1:20,0:21:60.58:138,0,61	0/1:9,0:9:8.13:39,0,8
chr10	32651842	.	C	CAC	2015.40	PASS	AB=0.990;AC=32;AF=0.615;AN=52;BaseQRankSum=0.229;DP=501;FS=0.751;HRun=0;HaplotypeScore=81.9756;InbreedingCoeff=-0.2834;MQ=48.65;MQ0=32;MQRankSum=2.029;QD=4.49;ReadPosRankSum=1.602;VQSLOD=1.7660;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:29:32.82:33,0,48	0/1:12,0:12:26.79:39,0,27	./.	./.	0/1:21,4:25:14.94:15,0,57	0/1:22,0:21:17.54:129,0,18	0/1:22,0:20:20.92:108,0,21	0/1:27,0:26:0:0,0,0	0/1:12,0:10:14.98:137,0,15	0/1:23,0:23:65.22:193,0,65	1/1:11,0:7:9.03:124,9,0	0/1:20,0:18:44.57:80,0,45	1/1:15,0:15:6.02:73,6,0	0/1:14,0:13:33.92:99,0,34	0/0:13,0:13:18.05:0,18,198	1/1:13,0:12:3:45,3,0	0/1:31,0:29:17.87:165,0,18	0/0:16,0:12:23.90:0,24,244	0/1:11,0:9:14.27:22,0,14	1/1:23,0:21:2.10:170,2,0	1/1:20,0:15:9.03:117,9,0	0/1:14,0:14:0:0,0,0	1/1:14,0:12:3.01:45,3,0	1/1:20,0:17:9.03:135,9,0	1/1:20,0:18:2.81:45,3,0	0/1:20,0:19:8.01:210,0,8	0/1:19,0:19:60.58:138,0,61	0/1:10,0:8:8.13:39,0,8
chr10	32652875	.	T	TG	3725.56	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=13.693;DP=648;FS=1.261;HRun=1;HaplotypeScore=73.9905;InbreedingCoeff=0.9991;MQ=72.88;MQ0=2;MQRankSum=-0.204;QD=27.39;ReadPosRankSum=0.012;VQSLOD=3.3916;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,15:18:45.02:554,45,0	0/0:9,0:9:27.09:0,27,349	0/0:14,0:14:40.62:0,41,477	0/0:20,0:20:53.38:0,53,666	0/0:36,0:36:99:0,102,1318	0/0:14,0:14:42.10:0,42,512	0/0:20,0:20:60.19:0,60,775	1/1:6,16:22:48.11:550,48,0	0/0:27,0:27:75.24:0,75,970	0/0:21,0:21:63.20:0,63,802	0/0:27,0:27:78:0,78,1011	0/0:27,0:27:81.25:0,81,1035	0/0:37,0:37:99:0,105,1331	0/0:16,0:16:48.16:0,48,621	0/0:33,0:33:96.27:0,96,1212	0/0:36,0:36:99:0,105,1362	0/0:19,0:19:57.19:0,57,739	0/0:16,0:16:45.12:0,45,563	1/1:9,12:20:33.46:486,33,0	1/1:2,21:24:56.69:666,57,0	1/1:2,10:11:26.94:335,27,0	0/0:16,0:16:48.16:0,48,620	0/0:27,0:27:74.83:0,75,944	0/0:17,0:17:48.15:0,48,612	0/0:33,0:33:99:0,99,1270	0/0:39,0:39:99:0,114,1477	1/1:9,29:38:85.24:1135,85,0	0/0:8,0:8:24.08:0,24,312
chr10	32655307	.	G	GA	3736.32	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-6.071;DP=593;FS=7.908;HRun=9;HaplotypeScore=61.5603;InbreedingCoeff=0.9648;MQ=60.29;MQ0=7;MQRankSum=1.073;QD=22.24;ReadPosRankSum=-0.310;VQSLOD=4.2144;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,36:42:87.14:927,87,0	0/0:12,0:12:32.99:0,33,286	0/0:10,0:7:20.65:0,21,151	0/0:2,0:2:5.87:0,6,41	0/0:29,0:28:83.98:0,84,727	0/0:30,0:30:77.96:0,78,673	0/0:20,1:20:11.76:0,12,331	1/1:9,17:26:54.12:586,54,0	0/0:12,0:12:35.98:0,36,308	0/0:19,0:19:44.97:0,45,388	0/0:23,0:23:65.95:0,66,568	0/0:21,0:21:53.97:0,54,468	0/0:20,0:20:50.95:0,51,435	0/0:25,0:25:53.97:0,54,468	0/0:18,0:18:49.77:0,50,415	0/0:17,0:17:44.99:0,45,391	0/0:34,0:34:93.45:0,93,807	0/0:25,0:25:62.97:0,63,546	1/1:3,17:20:48.13:530,48,0	1/1:5,22:28:63:665,63,0	1/1:4,16:20:30.08:332,30,0	0/0:19,0:19:47.36:0,47,398	0/0:15,0:14:32.98:0,33,285	0/0:21,0:21:56.02:0,56,493	0/0:22,0:22:62.99:0,63,547	0/0:24,0:23:59.97:0,60,520	1/1:4,27:31:63.17:697,63,0	0/0:6,0:6:11.98:0,12,104
chr10	32658206	.	A	AT	26166.44	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=2.336;DP=730;FS=0.864;HRun=1;HaplotypeScore=110.6178;InbreedingCoeff=0.9940;MQ=86.77;MQ0=0;MQRankSum=-7.684;QD=41.27;ReadPosRankSum=3.359;VQSLOD=4.6669;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,26:26:69.24:1100,69,0	1/1:0,11:11:30.10:479,30,0	0/0:32,0:32:90.25:0,90,1163	0/0:25,0:25:42.92:0,43,733	1/1:2,24:26:60.12:927,60,0	1/1:1,31:32:78.12:1244,78,0	1/1:2,13:15:36.12:574,36,0	1/1:3,28:31:84.25:1295,84,0	1/1:0,23:23:63.21:1006,63,0	1/1:1,26:27:78.27:1245,78,0	1/1:1,29:30:75.25:1195,75,0	1/1:1,30:31:87.30:1388,87,0	1/1:1,30:31:75.26:1194,75,0	1/1:1,29:30:75.25:1185,75,0	0/0:39,0:39:99:0,114,1594	1/1:0,28:28:78.27:1235,78,0	1/1:0,17:17:33.11:526,33,0	1/1:1,26:27:69.23:1101,69,0	1/1:0,19:19:54.17:839,54,0	1/1:2,40:42:99:1712,111,0	1/1:1,22:23:57.19:910,57,0	1/1:0,29:29:78.27:1244,78,0	1/1:2,24:26:63.21:1003,63,0	1/1:1,20:21:54.18:860,54,0	1/1:0,23:23:63.21:1007,63,0	1/1:0,33:33:96.27:1461,96,0	1/1:2,26:28:75.26:1197,75,0	1/1:0,5:5:15.05:239,15,0
chr10	32658471	.	GGGT	G	7813.90	PASS	AB=0.640;AC=42;AF=0.750;AN=56;BaseQRankSum=13.814;DP=504;FS=15.420;HRun=0;HaplotypeScore=273.7232;InbreedingCoeff=0.2826;MQ=80.82;MQ0=0;MQRankSum=-12.154;QD=18.60;ReadPosRankSum=10.049;VQSLOD=3.0688;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:12,10:22:30.08:331,30,0	1/1:0,5:5:15.04:163,15,0	0/0:30,0:30:73.19:0,73,1547	0/0:29,0:28:65.41:0,65,1356	1/1:8,9:17:22.46:206,22,0	1/1:1,10:11:24.95:271,25,0	1/1:8,9:17:26.56:270,27,0	0/1:12,6:18:21.61:153,0,22	1/1:9,10:19:12.09:280,12,0	1/1:3,18:21:51.14:574,51,0	0/1:3,11:14:8.65:314,0,9	1/1:11,13:24:21.10:366,21,0	1/1:5,10:15:30.08:327,30,0	0/1:6,11:17:19.18:287,0,19	0/0:25,0:25:75.26:0,75,1681	0/1:5,9:14:11.08:237,0,11	0/1:4,4:8:2.95:117,0,3	0/1:4,6:10:22.03:191,0,22	0/1:9,5:14:0.95:174,0,1	1/1:7,19:26:57.14:619,57,0	1/1:8,2:10:8.49:64,8,0	1/1:4,21:25:62.63:654,63,0	1/1:7,14:21:39.09:419,39,0	1/1:4,10:14:18.04:193,18,0	1/1:7,17:24:20.16:515,20,0	1/1:6,14:20:42.10:462,42,0	1/1:10,15:25:27.30:439,27,0	0/1:2,7:9:30.50:187,0,30
chr10	32658477	.	CACTTTGAGGT	C	22788.84	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=12.049;DP=408;FS=20.581;HRun=0;HaplotypeScore=250.2877;InbreedingCoeff=0.9502;MQ=89.18;MQ0=1;MQRankSum=-13.513;QD=71.44;ReadPosRankSum=7.018;VQSLOD=3.3369;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,10:11:30.10:874,30,0	1/1:0,5:5:15.05:435,15,0	0/0:30,0:30:78.18:0,78,3681	0/0:32,0:29:76.45:0,76,2760	1/1:1,9:10:24.08:631,24,0	1/1:2,9:12:32.51:782,33,0	1/1:1,9:10:29.46:767,29,0	1/1:8,6:14:29.98:554,30,0	1/1:1,10:11:30.09:813,30,0	1/1:1,18:19:54.19:1541,54,0	1/1:2,11:13:39.09:997,39,0	1/1:2,14:16:42.12:1086,42,0	1/1:1,10:11:33.11:900,33,0	1/1:2,11:13:36.11:922,36,0	0/0:26,0:26:78.27:0,78,3890	1/1:2,9:11:27.09:732,27,0	1/1:4,4:8:18.05:410,18,0	1/1:1,6:7:21.07:581,21,0	1/1:5,5:10:24.08:587,24,0	1/1:2,19:21:62.43:1716,62,0	1/1:1,2:3:6.02:150,6,0	1/1:2,21:23:68.18:1814,68,0	1/1:3,14:17:44.18:1175,44,0	1/1:1,10:11:21.80:529,22,0	1/1:2,17:19:57.18:1528,57,0	1/1:3,14:17:51.16:1311,51,0	1/1:3,15:18:49.95:1247,50,0	1/1:2,7:9:27.09:706,27,0
chr10	32659456	.	TAAA	T	19361.12	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-1.601;DP=662;FS=12.135;HRun=10;HaplotypeScore=110.6140;InbreedingCoeff=0.9604;MQ=74.21;MQ0=0;MQRankSum=-4.817;QD=32.05;ReadPosRankSum=3.933;VQSLOD=2.7453;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,22:22:51.16:696,51,0	1/1:1,8:9:18.06:245,18,0	0/0:16,0:17:35.82:0,36,567	0/0:16,0:19:32.06:0,32,431	1/1:0,29:29:60.10:796,60,0	1/1:1,25:26:72.24:983,72,0	1/1:2,18:20:45.14:614,45,0	1/1:5,31:36:93.12:1157,93,0	1/1:3,24:27:63.20:860,63,0	1/1:4,32:36:96.23:1268,96,0	1/1:2,25:27:69.12:917,69,0	1/1:3,21:24:60.19:819,60,0	1/1:3,31:34:84.27:1140,84,0	1/1:3,22:25:63.20:860,63,0	0/0:19,0:22:63.17:0,63,1210	1/1:10,18:29:29.37:648,29,0	1/1:1,21:22:57.19:778,57,0	1/1:0,14:14:39.13:532,39,0	1/1:5,14:19:42.04:503,42,0	1/1:2,22:24:63.20:859,63,0	1/1:4,12:16:33.01:426,33,0	1/1:3,22:25:57.16:777,57,0	1/1:4,26:30:72.23:982,72,0	1/1:1,15:16:33.11:450,33,0	1/1:4,27:31:78.25:1064,78,0	1/1:4,28:32:84.25:1129,84,0	1/1:3,26:29:57.18:778,57,0	1/1:0,2:2:6.02:82,6,0
chr10	32659801	.	T	TGCCATCAGAGAACACGGAG	114419.44	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=5.497;DP=656;FS=1.154;HRun=0;HaplotypeScore=383.2293;InbreedingCoeff=0.9375;MQ=52.38;MQ0=0;MQRankSum=-11.625;QD=190.38;ReadPosRankSum=1.824;VQSLOD=4.3356;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:18,8:26:66.12:4500,66,0	1/1:6,3:9:21.07:1798,21,0	0/0:6,0:6:17.22:0,17,399	0/0:13,0:14:33.44:0,33,657	1/1:26,12:38:69.24:5487,69,0	1/1:37,7:44:99:8362,126,0	1/1:13,3:16:48.13:3614,48,0	1/1:36,0:36:99:5468,99,0	1/1:16,9:26:72.20:5684,72,0	1/1:22,8:30:90.30:6737,90,0	1/1:18,4:22:42.10:2647,42,0	1/1:14,9:23:69.20:5183,69,0	1/1:25,12:37:99:8533,105,0	1/1:23,11:34:99:6455,99,0	0/0:35,0:35:99:0,99,4815	1/1:9,10:19:54.19:4382,54,0	1/1:12,3:15:32.90:2316,33,0	1/1:5,2:7:21.07:1470,21,0	1/1:12,4:16:45.15:2650,45,0	1/1:21,6:28:75.26:4921,75,0	1/1:7,0:7:6.02:190,6,0	1/1:24,13:37:99:7372,102,0	1/1:25,7:32:81.26:5555,81,0	1/1:9,1:10:24.08:1370,24,0	1/1:15,14:29:84.29:6749,84,0	1/1:16,10:26:75.20:4926,75,0	1/1:16,15:31:93.32:7547,93,0	1/1:2,1:3:9.03:505,9,0
chr10	32659805	.	C	CA	13510.44	PASS	AB=0.556;AC=49;AF=0.875;AN=56;BaseQRankSum=8.448;DP=473;FS=0.000;HRun=1;HaplotypeScore=251.7501;InbreedingCoeff=0.8255;MQ=62.04;MQ0=0;MQRankSum=-11.328;QD=32.56;ReadPosRankSum=3.101;VQSLOD=4.1716;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,12:14:24.07:356,24,0	1/1:0,5:5:11.95:129,12,0	0/0:7,0:7:11.54:0,12,143	0/0:16,0:16:39:0,39,447	1/1:1,21:22:41.04:498,41,0	1/1:1,30:31:83.80:958,84,0	1/1:1,7:8:20.98:263,21,0	1/1:0,21:21:63.21:943,63,0	1/1:0,15:15:45.11:631,45,0	1/1:0,26:26:78.26:1163,78,0	1/1:1,14:15:28.96:306,29,0	1/1:2,19:21:41.67:557,42,0	1/1:2,22:24:53.45:719,53,0	1/1:0,22:22:57.03:750,57,0	0/0:35,0:35:99:0,99,1266	1/1:1,15:16:48.06:636,48,0	1/1:2,8:10:23.96:278,24,0	1/1:0,6:6:18.03:245,18,0	1/1:0,9:9:27.09:403,27,0	1/1:1,20:22:34.78:488,35,0	1/1:0,6:6:5.15:88,5,0	1/1:4,20:24:46.24:702,46,0	1/1:3,21:24:56.82:669,57,0	0/1:1,4:5:1.86:56,0,2	1/1:0,19:19:51.13:733,51,0	1/1:0,22:22:66.22:985,66,0	1/1:2,21:24:57.11:793,57,0	1/1:1,3:4:12.03:162,12,0
chr10	32660117	.	TACAC	T	11993.84	PASS	AB=0.677;AC=44;AF=0.786;AN=56;BaseQRankSum=2.870;DP=801;FS=0.556;HRun=0;HaplotypeScore=146.8709;InbreedingCoeff=0.3690;MQ=58.51;MQ0=9;MQRankSum=-0.264;QD=16.77;ReadPosRankSum=0.132;VQSLOD=4.6733;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:18,1:35:2.38:2,0,215	1/1:5,5:10:9.50:144,9,0	0/0:21,0:14:3.01:0,3,67	0/0:23,0:16:6.02:0,6,108	1/1:8,10:17:33.10:499,33,0	1/1:15,16:31:36.11:552,36,0	1/1:9,18:27:39.13:621,39,0	1/1:30,6:34:15.02:190,15,0	1/1:9,18:27:39.12:598,39,0	1/1:16,7:22:12.50:230,13,0	1/1:8,11:20:14.52:358,15,0	1/1:13,27:41:57.10:887,57,0	1/1:10,28:39:37.19:889,37,0	1/1:16,21:38:51.03:774,51,0	0/0:38,0:42:74.54:0,75,1494	1/1:22,29:53:68.67:1180,69,0	1/1:11,19:29:42.14:668,42,0	0/1:7,8:15:10.17:310,0,10	0/1:14,4:17:32.63:100,0,33	1/1:6,14:21:36.05:506,36,0	0/1:31,30:60:4.90:525,0,5	1/1:15,14:32:35.89:512,36,0	0/1:13,13:25:36.09:246,0,36	1/1:10,20:31:39.05:593,39,0	1/1:9,14:24:33.11:504,33,0	1/1:8,18:27:47.97:650,48,0	1/1:12,9:20:20.93:281,21,0	0/1:2,5:7:2.95:176,0,3
chr10	32661106	.	GACTGTCCGTAGCACAA	G	53807.10	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=14.197;DP=636;FS=0.388;HRun=0;HaplotypeScore=349.8543;InbreedingCoeff=0.9466;MQ=79.51;MQ0=0;MQRankSum=-15.007;QD=103.67;ReadPosRankSum=6.142;VQSLOD=3.4603;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,102,6977	1/1:0,11:11:33.11:1561,33,0	0/0:28,0:28:77.62:0,78,3967	0/0:22,0:22:53.19:0,53,3360	1/1:7,23:30:60.16:2507,60,0	1/1:2,33:35:78.27:3642,78,0	1/1:5,16:21:36.12:1703,36,0	1/1:6,13:19:39.12:1457,39,0	1/1:2,29:32:78.27:3689,78,0	1/1:5,12:18:42.14:1754,42,0	1/1:2,20:23:60.16:2611,60,0	1/1:2,18:20:48.16:2270,48,0	1/1:0,28:28:69.24:3263,69,0	1/1:4,23:27:66.23:3026,66,0	0/0:32,0:32:96.33:0,96,7015	1/1:5,25:30:69.24:3119,69,0	1/1:3,10:13:27.09:1277,27,0	1/1:2,9:11:27.05:1153,27,0	1/1:6,9:15:27.04:944,27,0	1/1:2,27:29:78.27:3625,78,0	1/1:4,4:8:5.98:162,6,0	1/1:4,25:29:72.25:3300,72,0	1/1:3,23:26:56.23:2693,56,0	1/1:6,8:14:11.90:568,12,0	1/1:3,22:25:63.22:2980,63,0	1/1:4,28:32:84.29:3666,84,0	1/1:1,19:20:51.18:2412,51,0	1/1:0,3:3:9.03:426,9,0
chr10	32666098	.	A	AT	733.19	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-5.900;DP=641;FS=3.830;HRun=7;HaplotypeScore=61.5078;InbreedingCoeff=0.9926;MQ=75.06;MQ0=0;MQRankSum=-3.164;QD=26.19;ReadPosRankSum=2.042;VQSLOD=4.5561;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,27:28:69.21:828,69,0	0/0:16,0:16:45.07:0,45,434	0/0:17,0:17:28.33:0,28,339	0/0:15,0:15:32.60:0,33,286	0/0:33,0:33:84.10:0,84,799	0/0:19,0:19:51.08:0,51,492	0/0:16,0:16:45.07:0,45,435	0/0:34,0:34:90.14:0,90,869	0/0:17,0:17:51.07:0,51,487	0/0:24,0:24:69.09:0,69,660	0/0:18,0:18:51.07:0,51,486	0/0:21,0:21:51.07:0,51,492	0/0:32,0:32:87.13:0,87,840	0/0:18,0:18:34.27:0,34,441	0/0:35,0:35:99:0,99,950	0/0:29,0:29:87.13:0,87,835	0/0:26,0:26:75.12:0,75,724	0/0:9,0:9:21.03:0,21,203	0/0:20,0:20:48.07:0,48,463	0/0:30,0:30:87.14:0,87,840	0/0:25,0:25:69.09:0,69,660	0/0:20,0:20:57.09:0,57,550	0/0:22,0:22:66.09:0,66,632	0/0:17,0:17:48.05:0,48,456	0/0:28,0:28:81.13:0,81,782	0/0:30,0:30:81.09:0,81,771	0/0:31,0:31:78.09:0,78,744	0/0:11,0:11:24.03:0,24,231
chr10	32666485	.	AC	A	1485.99	PASS	AB=0.897;AC=22;AF=0.393;AN=56;BaseQRankSum=1.043;DP=414;FS=7.800;HRun=11;HaplotypeScore=58.8370;InbreedingCoeff=0.0320;MQ=72.98;MQ0=1;MQRankSum=0.454;QD=5.78;ReadPosRankSum=3.794;VQSLOD=1.0935;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:10,11:24:57.03:435,57,0	0/1:6,2:8:12.67:13,0,75	0/0:15,0:14:16.47:0,16,107	0/1:9,0:8:1.63:2,0,37	0/1:13,0:13:15.24:15,0,47	0/0:15,0:16:6.78:0,7,55	0/0:9,0:10:12:0,12,108	0/1:14,2:16:31.19:31,0,110	0/0:14,0:14:8.26:0,8,57	0/0:13,1:14:15.04:0,15,160	0/1:11,5:16:31.26:31,0,103	0/1:20,2:22:75.42:75,0,224	0/1:15,1:16:28.15:28,0,139	0/0:16,1:17:2.39:0,2,209	0/0:19,2:21:2.38:0,2,218	1/1:15,3:19:27.98:204,28,0	0/0:22,0:23:20.21:0,20,243	1/1:2,1:3:5.99:49,6,0	0/1:6,2:8:31.28:31,0,92	0/1:13,3:16:14.03:105,0,14	0/0:8,0:8:9.01:0,9,89	1/1:4,5:9:18.79:128,19,0	0/0:13,1:14:15.03:0,15,160	0/1:8,0:7:15.58:16,0,55	1/1:15,9:26:48.97:380,49,0	0/1:11,1:12:37.39:37,0,52	0/1:28,2:32:82.08:82,0,203	0/0:5,0:5:9.02:0,9,96
chr10	32668577	.	T	TG	1249.13	PASS	AB=0.821;AC=35;AF=0.625;AN=56;BaseQRankSum=-3.041;DP=485;FS=0.000;HRun=11;HaplotypeScore=97.4780;InbreedingCoeff=-0.0508;MQ=82.76;MQ0=0;MQRankSum=-0.087;QD=3.25;ReadPosRankSum=1.292;VQSLOD=0.3030;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:25:23.84:0,24,183	1/1:8,1:9:0.96:42,1,0	0/0:29,0:26:0.72:0,1,140	0/1:20,1:20:11.25:32,0,11	0/1:19,2:22:20.29:23,0,20	1/1:9,8:17:2.88:30,3,0	1/1:12,6:18:17.89:176,18,0	1/1:13,2:17:3.01:31,3,0	1/1:1,7:8:12.01:115,12,0	0/1:16,5:21:21.37:21,0,37	0/0:8,1:9:2.97:0,3,23	0/1:12,9:21:12.49:54,0,12	0/1:16,0:16:27.98:78,0,28	0/1:14,3:17:11.83:58,0,12	0/0:22,0:22:20.80:0,21,145	0/1:8,14:22:2.48:161,0,2	0/1:18,14:34:53.63:54,0,171	1/1:5,1:6:3.01:30,3,0	0/1:18,0:19:29.43:83,0,29	1/1:17,3:20:3.01:31,3,0	0/1:10,3:13:13.40:52,0,13	1/1:4,2:6:3.01:30,3,0	1/1:3,2:9:2.81:18,3,0	0/1:15,15:30:5.19:134,0,5	0/0:16,0:16:23.85:0,24,181	1/1:11,5:16:9.02:90,9,0	1/1:16,0:16:5.49:34,5,0	1/1:2,3:5:3.01:30,3,0
chr10	32669162	.	GA	G	20807.80	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=3.927;DP=609;FS=0.000;HRun=1;HaplotypeScore=63.7592;InbreedingCoeff=0.9685;MQ=75.83;MQ0=0;MQRankSum=-4.783;QD=37.83;ReadPosRankSum=3.546;VQSLOD=5.3338;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,19:19:51.17:711,51,0	1/1:0,12:12:32.94:411,33,0	0/0:15,0:16:41.96:0,42,511	0/0:10,0:10:29.81:0,30,401	1/1:0,39:39:99:1443,108,0	1/1:0,28:28:69.23:965,69,0	1/1:0,19:19:51.17:713,51,0	1/1:0,32:32:96.32:1341,96,0	1/1:0,17:17:45.15:629,45,0	1/1:0,28:29:87.21:1158,87,0	1/1:0,32:32:93.22:1256,93,0	1/1:0,25:25:63.21:881,63,0	1/1:0,17:17:48.16:671,48,0	1/1:0,28:28:81.27:1131,81,0	0/0:33,0:33:99:0,99,1529	1/1:0,20:20:54.18:755,54,0	1/1:0,20:20:57.19:797,57,0	1/1:0,5:5:9.03:122,9,0	1/1:0,21:21:60.19:819,60,0	1/1:0,29:29:84.18:1125,84,0	1/1:0,12:12:36.12:503,36,0	1/1:0,24:24:66.22:923,66,0	1/1:0,22:22:57.19:797,57,0	1/1:0,12:12:30.10:419,30,0	1/1:0,17:17:39.13:545,39,0	1/1:0,27:27:81.24:1099,81,0	1/1:0,40:40:99:1425,102,0	1/1:0,4:4:12.04:168,12,0
chr10	32670019	.	GA	G	13556.61	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=4.106;DP=601;FS=6.461;HRun=8;HaplotypeScore=61.0013;InbreedingCoeff=0.9856;MQ=75.53;MQ0=0;MQRankSum=-6.007;QD=24.87;ReadPosRankSum=3.564;VQSLOD=5.6653;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,14:17:39.06:376,39,0	1/1:1,7:8:18.03:174,18,0	0/0:21,0:21:53.64:0,54,605	0/0:8,0:8:15.04:0,15,166	1/1:0,39:39:99:1043,108,0	1/1:1,22:23:60.09:579,60,0	1/1:1,15:16:39.06:377,39,0	1/1:3,13:16:39.06:376,39,0	1/1:3,24:27:57.09:550,57,0	1/1:2,18:20:54.08:521,54,0	1/1:3,32:35:84.12:811,84,0	1/1:0,19:19:57.09:550,57,0	1/1:2,32:34:93.15:898,93,0	1/1:1,23:24:63.10:608,63,0	0/0:26,0:26:77.91:0,78,917	1/1:2,28:30:84.13:811,84,0	1/1:2,9:11:24.04:232,24,0	1/1:1,9:10:24.04:232,24,0	1/1:2,16:18:48.07:462,48,0	1/1:1,28:29:84.13:811,84,0	1/1:1,24:25:69.11:666,69,0	1/1:2,21:23:60.10:579,60,0	1/1:2,23:25:60:579,60,0	1/1:0,8:8:21.03:203,21,0	1/1:4,27:31:78.12:753,78,0	1/1:1,19:20:57.09:550,57,0	1/1:6,25:31:65.99:637,66,0	1/1:0,6:6:18.03:174,18,0
chr10	32673982	.	A	AAAAC	918.63	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-4.012;DP=650;FS=0.965;HRun=0;HaplotypeScore=107.0803;InbreedingCoeff=0.7151;MQ=64.26;MQ0=0;MQRankSum=-0.257;QD=41.76;ReadPosRankSum=-0.110;VQSLOD=4.0479;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:51.43:0,51,835	0/0:16,0:16:30.09:0,30,457	0/0:14,0:11:12.01:0,12,167	0/0:15,0:13:4.67:0,5,56	0/0:43,0:43:96.30:0,96,1479	0/0:23,0:22:63.21:0,63,1013	0/0:22,0:22:42.14:0,42,678	0/0:32,0:32:42.03:0,42,676	0/0:22,0:22:51.64:0,52,803	0/0:27,0:27:57.19:0,57,922	0/0:26,0:26:51.17:0,51,805	0/0:36,0:36:54.18:0,54,872	0/0:27,0:27:63.17:0,63,926	0/0:22,0:22:51.15:0,51,780	1/1:7,15:21:42.14:1013,42,0	0/0:28,0:28:57.19:0,57,918	0/0:20,0:20:40.61:0,41,629	0/0:21,0:21:10.03:0,10,574	0/0:15,0:15:24.07:0,24,367	0/0:23,0:23:60.17:0,60,878	0/0:20,0:20:48.16:0,48,773	0/0:19,0:19:33.11:0,33,535	0/0:19,0:19:39.13:0,39,631	0/0:24,0:24:63.22:0,63,1021	0/0:25,0:25:54.16:0,54,809	0/0:31,0:31:81.28:0,81,1309	0/0:33,0:32:54.16:0,54,824	0/0:1,0:1:3.01:0,3,49
chr10	32677416	.	GACACACACACAC	G	12986.65	PASS	AB=0.801;AC=45;AF=0.804;AN=56;BaseQRankSum=4.359;DP=568;FS=6.355;HRun=0;HaplotypeScore=201.6289;InbreedingCoeff=0.4452;MQ=63.66;MQ0=8;MQRankSum=-4.068;QD=27.11;ReadPosRankSum=1.425;VQSLOD=3.7472;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:28:34.48:53,0,34	1/1:3,7:10:15.05:455,15,0	0/0:27,0:18:3.01:0,3,63	0/0:32,0:23:6.02:0,6,160	1/1:18,11:30:21.07:670,21,0	1/1:17,9:28:27.09:852,27,0	1/1:10,3:13:5.96:123,6,0	1/1:25,0:25:10.68:211,11,0	1/1:12,5:17:15.05:517,15,0	1/1:7,3:10:6.01:136,6,0	1/1:6,6:12:9.03:310,9,0	1/1:9,11:20:27.09:905,27,0	1/1:16,14:31:39.13:1325,39,0	1/1:6,8:16:24.08:740,24,0	0/0:19,0:19:36.11:0,36,1678	1/1:7,11:18:33.11:1118,33,0	1/1:12,3:16:8.99:207,9,0	0/0:10,0:11:3.01:0,3,95	1/1:9,3:15:15.05:478,15,0	1/1:15,6:22:21.07:638,21,0	1/1:16,0:16:0.45:1,0,0	1/1:9,4:13:6.02:207,6,0	1/1:10,13:24:24.55:647,25,0	0/1:12,5:18:80.55:471,0,81	1/1:14,17:31:30.10:1009,30,0	1/1:13,10:22:15.04:462,15,0	1/1:15,14:30:40.79:1356,41,0	0/1:6,5:11:94.60:95,0,220
chr10	32683414	.	AT	A	10894.18	PASS	AB=0.952;AC=51;AF=0.911;AN=56;BaseQRankSum=1.680;DP=518;FS=0.000;HRun=9;HaplotypeScore=54.3554;InbreedingCoeff=0.7786;MQ=67.78;MQ0=0;MQRankSum=-2.345;QD=21.92;ReadPosRankSum=2.942;VQSLOD=5.4274;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,25:30:72.04:658,72,0	1/1:0,10:10:27.01:247,27,0	0/1:19,1:17:3.45:3,0,201	0/0:7,0:6:13.28:0,13,111	1/1:5,30:35:27.89:681,28,0	1/1:3,9:12:24:220,24,0	1/1:1,13:14:27.01:247,27,0	1/1:4,23:27:69.01:625,69,0	1/1:0,7:7:21.01:192,21,0	1/1:3,31:35:95.06:848,95,0	1/1:3,24:27:66.01:602,66,0	1/1:0,19:19:57.03:522,57,0	1/1:3,15:18:42.02:384,42,0	1/1:2,20:22:54.03:494,54,0	0/0:13,0:13:33.09:0,33,372	1/1:1,16:17:42.02:384,42,0	1/1:3,18:21:45.02:412,45,0	1/1:0,6:6:15:137,15,0	1/1:2,22:24:66.03:604,66,0	1/1:0,22:22:63.03:576,63,0	1/1:2,2:4:3:27,3,0	1/1:1,18:19:54.03:494,54,0	1/1:0,13:13:39.02:357,39,0	1/1:0,8:8:21.01:192,21,0	1/1:2,14:16:25.87:339,26,0	1/1:3,22:25:66.03:604,66,0	1/1:2,28:30:72.03:659,72,0	1/1:2,14:16:42.01:384,42,0
chr10	32684351	.	A	AAT	6347.22	PASS	AC=46;AF=0.885;AN=52;BaseQRankSum=-4.800;DP=253;FS=1.245;HRun=0;HaplotypeScore=28.9647;InbreedingCoeff=0.6160;MQ=86.54;MQ0=3;MQRankSum=-3.700;QD=32.06;ReadPosRankSum=1.727;VQSLOD=5.8187;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,5:5:12.04:202,12,0	1/1:2,2:4:3.01:51,3,0	0/0:19,0:9:9.03:0,9,115	0/0:21,0:13:11.80:0,12,109	1/1:3,9:12:21.07:292,21,0	1/1:0,6:7:18.06:304,18,0	1/1:0,6:6:9.03:152,9,0	1/1:7,37:45:99:1831,111,0	1/1:0,1:1:3.01:51,3,0	1/1:2,5:7:15.05:253,15,0	1/1:6,7:13:21.07:289,21,0	./.	1/1:1,1:2:3.01:50,3,0	1/1:3,7:10:15.05:253,15,0	0/0:7,0:7:15.05:0,15,193	1/1:1,9:10:18.06:304,18,0	1/1:1,8:9:18.06:304,18,0	1/1:1,5:6:9.03:152,9,0	1/1:4,4:8:12.04:202,12,0	1/1:0,4:4:12.04:157,12,0	1/1:0,5:5:3.01:51,3,0	1/1:1,2:3:6.02:85,6,0	1/1:2,2:4:3.01:51,3,0	./.	1/1:3,6:9:18.06:304,18,0	1/1:2,5:7:15.05:253,15,0	1/1:1,7:8:15.05:253,15,0	1/1:0,13:13:30.10:506,30,0
chr10	32685899	.	TG	T	12940.43	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=4.795;DP=602;FS=14.140;HRun=9;HaplotypeScore=103.6344;InbreedingCoeff=0.9975;MQ=79.08;MQ0=0;MQRankSum=-7.804;QD=23.92;ReadPosRankSum=5.546;VQSLOD=3.8039;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,19:21:51.02:467,51,0	1/1:0,8:8:24.01:220,24,0	0/0:25,1:26:41.32:0,41,667	0/0:19,0:18:41.53:0,42,451	1/1:6,29:34:87.03:796,87,0	1/1:1,16:17:45.02:412,45,0	1/1:4,24:28:72.02:659,72,0	1/1:1,19:20:57.01:514,57,0	1/1:1,15:16:45.02:412,45,0	1/1:4,23:27:69.02:626,69,0	1/1:6,16:22:42.02:383,42,0	1/1:2,31:33:93.04:850,93,0	1/1:2,28:30:84.04:768,84,0	1/1:3,22:25:60.01:549,60,0	0/0:15,0:15:36.11:0,36,415	1/1:3,33:36:90.05:824,90,0	1/1:0,18:17:51.03:467,51,0	1/1:0,18:18:51.03:467,51,0	1/1:0,19:19:57.03:522,57,0	1/1:2,18:20:54.02:494,54,0	1/1:6,15:21:45.02:412,45,0	1/1:2,13:15:39.02:357,39,0	1/1:2,11:13:30.01:275,30,0	1/1:2,19:21:57.03:522,57,0	1/1:2,20:22:60.03:549,60,0	1/1:2,13:15:39.02:357,39,0	1/1:2,32:34:93.05:851,93,0	1/1:0,7:7:21.01:192,21,0
chr10	32686127	.	G	GA	15265.88	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=7.682;DP=539;FS=11.241;HRun=6;HaplotypeScore=87.7062;InbreedingCoeff=0.9440;MQ=80.21;MQ0=0;MQRankSum=-5.253;QD=31.09;ReadPosRankSum=3.592;VQSLOD=4.4796;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,21:25:57.18:703,57,0	1/1:0,7:7:21.07:259,21,0	0/0:22,0:22:27.02:0,27,328	0/0:8,0:8:12.02:0,12,121	1/1:5,26:31:78.63:925,79,0	1/1:2,14:16:45.13:544,45,0	1/1:2,14:16:42.13:518,42,0	1/1:7,21:28:63.16:748,63,0	1/1:1,16:17:45.14:555,45,0	1/1:2,24:27:72.95:845,73,0	1/1:2,10:12:30.08:349,30,0	1/1:3,20:24:66.54:786,67,0	1/1:3,26:29:75.06:925,75,0	1/1:2,16:18:45.14:556,45,0	0/0:18,0:18:54.06:0,54,531	1/1:3,23:26:69.69:852,70,0	1/1:2,21:22:60.18:730,60,0	1/1:3,14:17:42.13:518,42,0	1/1:3,22:25:65.34:811,65,0	1/1:1,24:25:72.11:829,72,0	1/1:1,7:8:21.07:259,21,0	1/1:1,14:15:39.08:465,39,0	1/1:3,17:21:60:694,60,0	1/1:0,5:5:15.05:185,15,0	1/1:0,16:17:44.97:533,45,0	1/1:2,20:23:63.03:754,63,0	1/1:8,26:34:69.22:850,69,0	1/1:0,2:2:6.02:74,6,0
chr10	32687331	.	G	GA	12320.96	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-7.854;DP=455;FS=13.456;HRun=1;HaplotypeScore=57.5774;InbreedingCoeff=0.9267;MQ=81.40;MQ0=5;MQRankSum=-2.975;QD=31.27;ReadPosRankSum=4.935;VQSLOD=3.1157;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,31:31:63.21:900,63,0	1/1:0,5:4:6.02:85,6,0	0/0:19,0:15:22.54:0,23,337	0/0:24,0:21:35.92:0,36,316	1/1:1,20:21:57.08:751,57,0	1/1:0,25:25:69.23:974,69,0	1/1:1,16:17:39.12:557,39,0	1/1:4,15:19:42.08:564,42,0	1/1:2,12:14:26.60:385,27,0	1/1:1,17:18:42.09:535,42,0	1/1:0,19:19:45.02:585,45,0	1/1:0,12:12:27.08:369,27,0	1/1:1,14:15:32.99:466,33,0	1/1:0,13:13:39.13:556,39,0	0/0:18,0:18:48.14:0,48,629	1/1:1,17:18:32.84:466,33,0	1/1:1,19:20:48.16:680,48,0	1/1:0,4:4:12.04:171,12,0	1/1:2,7:9:21.70:293,22,0	1/1:2,16:18:36.10:513,36,0	1/1:1,10:11:21.07:300,21,0	1/1:0,11:11:27.09:386,27,0	1/1:2,12:14:26.32:366,26,0	1/1:0,9:8:18.06:255,18,0	1/1:1,22:23:51.17:728,51,0	1/1:1,15:15:42.11:560,42,0	1/1:2,22:23:54.15:752,54,0	1/1:0,8:8:9.03:125,9,0
chr10	32688738	.	TTC	T	883.75	PASS	AB=0.932;AC=20;AF=0.385;AN=52;BaseQRankSum=3.886;DP=372;FS=41.498;HRun=0;HaplotypeScore=73.3147;InbreedingCoeff=-0.4584;MQ=43.73;MQ0=10;MQRankSum=-1.617;QD=3.30;ReadPosRankSum=-0.709;VQSLOD=-0.1754;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:17,3:18:1.71:2,0,562	0/0:3,0:3:6.49:0,6,101	./.	./.	0/0:28,1:29:53.43:0,53,770	0/1:15,2:17:99:111,0,378	0/0:12,3:14:30.10:0,30,454	0/1:22,2:22:56.32:56,0,622	0/1:17,0:13:15.20:15,0,350	0/1:15,4:17:94.43:94,0,526	0/1:8,0:8:31.09:31,0,160	0/1:7,1:8:30.09:30,0,133	0/1:9,3:12:99:127,0,146	0/1:17,1:19:99:105,0,399	0/1:18,0:18:6.54:7,0,599	0/1:11,0:10:47.29:47,0,161	0/1:11,1:10:17.41:17,0,252	0/1:7,0:7:10:10,0,206	0/1:10,0:7:61.24:61,0,128	0/0:17,1:17:31.30:0,31,455	0/0:8,3:8:12.04:0,12,205	0/1:15,0:15:14.74:15,0,355	0/0:10,0:10:24.08:0,24,364	0/1:8,1:8:37.37:37,0,93	0/0:14,3:14:21.07:0,21,346	0/1:19,2:20:49.95:50,0,709	0/1:14,2:15:99:164,0,280	1/1:1,3:4:5.98:56,6,0
chr10	32691286	.	TA	T	8051.76	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-2.642;DP=466;FS=24.115;HRun=11;HaplotypeScore=52.3752;InbreedingCoeff=0.9190;MQ=63.27;MQ0=10;MQRankSum=-0.690;QD=19.31;ReadPosRankSum=3.527;VQSLOD=3.9263;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,13:16:38.95:320,39,0	1/1:2,10:12:26.96:221,27,0	0/0:18,0:12:18.16:0,18,247	0/0:14,0:7:11.02:0,11,128	1/1:7,8:15:22.98:178,23,0	1/1:3,14:17:38.92:320,39,0	1/1:0,12:12:35.96:296,36,0	1/1:6,23:28:59.89:492,60,0	1/1:2,20:22:56.93:468,57,0	1/1:4,10:14:29.96:246,30,0	1/1:2,14:17:40.98:326,41,0	1/1:1,9:10:26.97:222,27,0	1/1:1,12:13:35.79:295,36,0	1/1:3,15:18:44.91:369,45,0	0/0:15,0:15:27.07:0,27,286	1/1:0,15:15:35.81:295,36,0	1/1:6,19:25:53.93:443,54,0	1/1:3,18:21:50.94:419,51,0	1/1:2,12:12:32.93:266,33,0	1/1:4,21:27:55.94:449,56,0	1/1:2,14:16:41.94:345,42,0	1/1:2,7:9:17.97:148,18,0	1/1:3,19:22:56.93:468,57,0	1/1:3,14:17:35.95:296,36,0	1/1:1,13:14:35.96:296,36,0	1/1:2,22:24:62.88:513,63,0	1/1:3,14:17:41.84:337,42,0	1/1:0,1:1:3:25,3,0
chr10	32692084	.	G	GA	12527.90	PASS	AB=0.767;AC=50;AF=0.893;AN=56;BaseQRankSum=-7.039;DP=579;FS=4.953;HRun=9;HaplotypeScore=57.7607;InbreedingCoeff=0.7162;MQ=62.86;MQ0=7;MQRankSum=-1.212;QD=23.16;ReadPosRankSum=1.805;VQSLOD=5.8885;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,40:43:99:1209,114,0	1/1:1,9:10:27.07:299,27,0	0/1:10,0:7:1.48:1,0,66	0/0:14,0:9:23.98:0,24,203	1/1:3,16:19:21.91:451,22,0	1/1:4,12:16:6.99:292,7,0	1/1:3,17:20:48.13:530,48,0	1/1:7,17:24:39:381,39,0	1/1:1,16:17:38.68:431,39,0	1/1:5,26:31:60.15:654,60,0	1/1:1,16:17:48.13:531,48,0	1/1:1,15:17:18.90:420,19,0	1/1:6,18:25:45.12:498,45,0	1/1:1,11:12:24.06:266,24,0	0/0:24,0:24:62.98:0,63,547	1/1:1,19:20:54.15:597,54,0	1/1:6,24:30:46.81:734,47,0	1/1:0,6:6:18.05:199,18,0	1/1:4,17:21:25.02:481,25,0	1/1:5,28:33:75.12:801,75,0	1/1:6,18:25:47.96:512,48,0	1/1:0,10:10:24.06:265,24,0	1/1:6,17:23:12.96:365,13,0	1/1:0,20:23:59.66:605,60,0	1/1:6,24:31:21.29:668,21,0	1/1:2,21:23:57.15:629,57,0	1/1:3,20:24:48.13:531,48,0	0/1:1,7:8:5:178,0,5
chr10	32696690	.	TACACACACACACACACACAC	T	6063.51	PASS	AB=0.783;AC=33;AF=0.589;AN=56;BaseQRankSum=3.448;DP=583;FS=3.271;HRun=0;HaplotypeScore=245.4107;InbreedingCoeff=0.0024;MQ=58.05;MQ0=20;MQRankSum=-1.416;QD=13.53;ReadPosRankSum=1.069;VQSLOD=3.5266;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:26.99:0,27,512	1/1:10,0:10:14.95:134,15,0	0/0:39,0:24:5.72:0,6,35	0/0:48,0:28:11.91:0,12,86	1/1:8,8:16:4.35:608,4,0	0/1:11,15:26:43.54:283,0,44	0/1:26,0:25:3.11:149,0,3	0/1:19,0:19:0.97:84,0,1	0/1:10,11:21:1.66:311,0,2	0/1:14,11:23:18.37:299,0,18	1/1:13,0:16:15.39:231,15,0	0/1:2,9:11:1.14:155,0,1	0/1:9,14:24:18.09:288,0,18	0/1:11,0:11:14.10:26,0,14	0/0:28,0:28:29.76:0,30,1546	1/1:4,14:18:14.94:668,15,0	1/1:16,0:16:14.71:142,15,0	0/1:9,0:9:0.78:56,0,1	0/1:13,6:18:3.89:207,0,4	1/1:8,11:19:12.04:407,12,0	0/1:21,0:19:5.07:37,0,5	1/1:9,15:24:6.91:321,7,0	1/1:11,13:24:7.42:632,7,0	0/1:11,10:22:4.95:94,0,5	0/1:10,16:26:99:464,0,182	0/1:22,0:21:9.93:150,0,10	0/1:3,13:17:1.08:299,0,1	1/1:3,0:1:2.94:18,3,0
chr10	32698299	.	C	CT	6359.81	PASS	AB=0.663;AC=47;AF=0.870;AN=54;BaseQRankSum=-5.675;DP=429;FS=21.267;HRun=11;HaplotypeScore=44.5182;InbreedingCoeff=0.4844;MQ=74.89;MQ0=1;MQRankSum=-2.543;QD=16.02;ReadPosRankSum=0.165;VQSLOD=3.5129;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,1:13:25.73:145,26,0	1/1:1,8:9:24.05:244,24,0	0/0:15,0:14:16.91:0,17,122	0/1:15,0:13:10.85:11,0,112	1/1:9,26:35:32.84:637,33,0	1/1:1,13:14:30.06:305,30,0	0/1:4,11:16:4.56:307,0,5	1/1:6,14:22:27.90:389,28,0	1/1:2,12:14:21.04:213,21,0	1/1:9,9:18:15.42:167,15,0	1/1:1,11:12:29.94:272,30,0	0/1:1,11:12:5.20:134,0,5	1/1:10,4:14:32.65:298,33,0	1/1:1,9:11:8.85:75,9,0	0/0:17,0:17:41.83:0,42,325	1/1:3,10:14:20.20:238,20,0	1/1:4,12:16:9.66:265,10,0	1/1:2,8:10:11.96:109,12,0	1/1:4,8:12:21.04:213,21,0	1/1:6,12:19:32.82:293,33,0	1/1:4,12:16:24.05:244,24,0	./.	1/1:3,8:11:30.02:289,30,0	1/1:1,6:8:5.85:45,6,0	1/1:4,15:20:35.91:349,36,0	1/1:16,12:28:51.02:487,51,0	1/1:6,18:24:42.80:412,43,0	1/1:1,9:10:3.82:220,4,0
chr10	32699543	.	A	AT	14042.45	PASS	AB=0.611;AC=49;AF=0.875;AN=56;BaseQRankSum=-8.783;DP=507;FS=0.000;HRun=6;HaplotypeScore=45.0851;InbreedingCoeff=0.8396;MQ=81.14;MQ0=0;MQRankSum=-3.186;QD=30.59;ReadPosRankSum=4.437;VQSLOD=4.8828;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,15:14:39.12:491,39,0	1/1:0,11:11:30.10:377,30,0	0/0:17,0:17:42.09:0,42,424	0/0:8,0:8:14.97:0,15,129	1/1:3,29:32:81.26:1019,81,0	1/1:1,10:11:27.09:340,27,0	1/1:1,15:16:36.12:453,36,0	1/1:8,37:45:99:1368,111,0	1/1:3,16:19:48.15:600,48,0	1/1:5,18:23:54.14:647,54,0	1/1:0,20:20:54.17:679,54,0	1/1:0,17:17:48.15:604,48,0	1/1:1,10:11:24.08:302,24,0	1/1:3,13:16:42.13:523,42,0	0/0:23,0:23:69.08:0,69,679	1/1:2,18:20:48.15:604,48,0	1/1:0,16:16:45.14:566,45,0	1/1:1,6:7:18.06:226,18,0	1/1:3,16:19:48.11:572,48,0	1/1:5,25:30:41.58:820,42,0	1/1:0,9:9:18.06:226,18,0	1/1:3,12:15:36.11:452,36,0	1/1:2,17:19:51.16:636,51,0	1/1:3,9:12:27.09:340,27,0	1/1:1,15:16:39.12:491,39,0	1/1:2,21:23:60.19:755,60,0	1/1:6,20:26:60.19:747,60,0	0/1:4,7:10:9.54:205,0,10
chr10	32700255	.	GT	G	15356.95	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=4.082;DP=619;FS=1.735;HRun=6;HaplotypeScore=70.8073;InbreedingCoeff=0.9973;MQ=82.80;MQ0=0;MQRankSum=-6.914;QD=27.57;ReadPosRankSum=4.869;VQSLOD=5.2627;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,12:12:33.08:355,33,0	1/1:1,10:11:30.08:322,30,0	0/0:18,0:18:47.88:0,48,564	0/0:17,0:17:37.83:0,38,432	1/1:1,23:24:66.17:709,66,0	1/1:1,25:26:66.16:709,66,0	1/1:3,12:15:27.06:290,27,0	1/1:5,26:31:78.17:823,78,0	1/1:0,20:20:45.11:484,45,0	1/1:5,29:34:92.97:979,93,0	1/1:0,30:30:90.23:967,90,0	1/1:2,19:21:57.14:613,57,0	1/1:2,21:23:60.02:645,60,0	1/1:0,22:22:54.14:580,54,0	0/0:27,0:27:75.21:0,75,946	1/1:2,28:30:72.18:774,72,0	1/1:2,21:23:60.15:642,60,0	1/1:1,8:9:21.02:214,21,0	1/1:4,22:26:66.13:692,66,0	1/1:0,25:25:75.12:791,75,0	1/1:1,15:16:36.09:387,36,0	1/1:2,25:27:66.16:709,66,0	1/1:1,26:27:69.04:739,69,0	1/1:4,9:13:27.06:290,27,0	1/1:0,15:15:45.11:484,45,0	1/1:2,27:29:81.20:870,81,0	1/1:3,35:38:90.23:967,90,0	1/1:0,10:10:30.08:322,30,0
chr10	32700836	.	AGGGGTAGAAGCTTATGAATC	A	44854.57	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=12.060;DP=528;FS=8.621;HRun=0;HaplotypeScore=299.9277;InbreedingCoeff=0.8024;MQ=90.58;MQ0=0;MQRankSum=-13.296;QD=101.02;ReadPosRankSum=6.562;VQSLOD=3.1031;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,13:13:12.04:698,12,0	1/1:0,4:4:6.02:349,6,0	0/0:30,0:30:90.31:0,90,5169	0/0:25,0:25:75.09:0,75,4738	1/1:0,24:24:41.95:2287,42,0	1/1:0,25:25:45.15:2454,45,0	1/1:0,6:6:3.01:174,3,0	1/1:0,34:34:99:2787,102,0	1/1:1,15:16:48.16:2706,48,0	1/1:0,23:24:68.95:2520,69,0	1/1:0,17:18:39.05:1651,39,0	1/1:1,24:25:54.19:3116,54,0	1/1:0,25:25:45.07:2459,45,0	1/1:0,18:18:33.11:1878,33,0	0/0:29,0:29:87.27:0,87,7464	1/1:0,11:11:21.07:1187,21,0	1/1:0,9:9:6.02:342,6,0	1/1:0,2:2:6.02:349,6,0	1/1:0,16:16:48.01:1355,48,0	1/1:0,28:28:57.16:3079,57,0	1/1:0,20:20:18.06:1008,18,0	1/1:0,28:28:57.20:3210,57,0	1/1:0,22:22:42.14:2398,42,0	1/1:0,7:7:15.05:828,15,0	1/1:0,18:18:45.15:2576,45,0	1/1:0,25:25:62.55:2304,63,0	1/1:0,24:24:48.16:2791,48,0	1/1:0,2:2:6.02:349,6,0
chr10	32701223	.	AAG	A	16050.35	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=1.537;DP=568;FS=29.840;HRun=0;HaplotypeScore=74.5578;InbreedingCoeff=0.9679;MQ=75.14;MQ0=3;MQRankSum=-6.926;QD=32.42;ReadPosRankSum=3.522;VQSLOD=3.9661;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,19:21:42.14:587,42,0	1/1:1,5:6:9.03:126,9,0	0/0:22,0:21:51.15:0,51,813	0/0:25,0:23:30.37:0,30,760	1/1:3,23:26:60.07:773,60,0	1/1:0,28:28:81.27:1134,81,0	1/1:2,17:19:33.11:462,33,0	1/1:6,14:20:42.11:552,42,0	1/1:0,17:17:48.16:669,48,0	1/1:0,26:26:69.20:922,69,0	1/1:3,13:16:36.12:503,36,0	1/1:1,16:17:45.15:630,45,0	1/1:2,18:20:42.14:588,42,0	1/1:1,19:20:48.16:671,48,0	0/0:26,0:26:66.23:0,66,1171	1/1:3,19:22:39.13:546,39,0	1/1:0,21:21:51.17:714,51,0	1/1:3,4:7:12.04:168,12,0	1/1:0,10:10:27.03:322,27,0	1/1:4,25:29:60.08:776,60,0	1/1:0,12:12:27.09:377,27,0	1/1:1,25:26:63.21:879,63,0	1/1:2,17:19:45.15:630,45,0	1/1:0,21:21:48.16:672,48,0	1/1:1,17:18:39.13:542,39,0	1/1:1,28:29:87.25:1177,87,0	1/1:2,30:31:84.28:1170,84,0	1/1:0,12:12:33.11:462,33,0
chr10	32701227	.	GA	G	4662.81	PASS	AB=0.958;AC=44;AF=0.786;AN=56;BaseQRankSum=9.862;DP=567;FS=15.967;HRun=1;HaplotypeScore=104.3330;InbreedingCoeff=0.3294;MQ=74.52;MQ0=3;MQRankSum=-7.738;QD=9.42;ReadPosRankSum=8.165;VQSLOD=0.5322;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:19:13.54:154,14,0	0/1:6,0:6:17.39:28,0,17	0/0:20,0:19:53.64:0,54,704	0/0:27,0:25:48.83:0,49,779	0/1:23,2:25:20.95:216,0,21	1/1:30,0:30:29.15:299,29,0	1/1:19,0:19:11.43:121,11,0	0/1:20,0:20:10.96:136,0,11	1/1:17,0:17:44.57:205,45,0	1/1:28,0:28:6.19:228,6,0	0/1:16,2:18:58.75:110,0,59	1/1:16,0:16:41.97:196,42,0	1/1:18,1:19:39.17:182,39,0	1/1:19,1:20:44.91:212,45,0	0/0:25,0:25:69.23:0,69,994	0/1:21,1:22:10.03:127,0,10	1/1:21,0:21:47.56:221,48,0	1/1:5,0:5:11.19:52,11,0	1/1:12,0:12:2.54:130,3,0	0/1:26,1:27:15.86:217,0,16	1/1:13,0:13:25.13:117,25,0	1/1:25,0:25:58.63:271,59,0	1/1:18,1:19:41.97:196,42,0	1/1:21,0:21:44.77:208,45,0	1/1:18,1:19:36.17:166,36,0	1/1:28,1:29:75.14:367,75,0	1/1:30,2:31:78.02:362,78,0	1/1:12,0:12:30.78:143,31,0
chr10	32702211	.	G	GA	14150.31	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-7.850;DP=543;FS=6.902;HRun=8;HaplotypeScore=49.5616;InbreedingCoeff=0.9755;MQ=77.52;MQ0=1;MQRankSum=-5.128;QD=28.64;ReadPosRankSum=3.266;VQSLOD=5.2061;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,24:26:66.20:762,66,0	1/1:2,12:14:33.10:381,33,0	0/0:15,0:15:29.99:0,30,271	0/0:19,0:17:15.04:0,15,224	1/1:3,19:22:54.04:579,54,0	1/1:3,21:24:38.73:699,39,0	1/1:2,13:15:30.09:346,30,0	1/1:4,20:24:57.17:658,57,0	1/1:0,17:17:48.14:554,48,0	1/1:4,18:22:29.70:596,30,0	1/1:1,21:22:60.09:663,60,0	1/1:1,12:13:30.09:346,30,0	1/1:1,16:17:48.14:554,48,0	1/1:2,22:24:62.96:727,63,0	0/0:15,0:15:36:0,36,325	1/1:1,8:9:15.04:173,15,0	1/1:2,16:18:48.14:554,48,0	1/1:1,5:6:12.04:138,12,0	1/1:2,15:17:45.11:499,45,0	1/1:5,24:29:69.21:796,69,0	1/1:4,19:23:60.17:683,60,0	1/1:1,17:18:45.13:519,45,0	1/1:1,23:24:63.19:727,63,0	1/1:6,18:24:62.19:678,62,0	1/1:1,24:26:66.03:741,66,0	1/1:4,20:24:60.16:681,60,0	1/1:3,26:29:75.20:852,75,0	1/1:0,7:7:21.06:242,21,0
chr10	32702968	.	T	TA	13413.57	PASS	AB=1.000;AC=51;AF=0.911;AN=56;BaseQRankSum=-6.169;DP=566;FS=4.115;HRun=9;HaplotypeScore=56.3612;InbreedingCoeff=0.7400;MQ=64.44;MQ0=1;MQRankSum=-0.752;QD=24.57;ReadPosRankSum=2.099;VQSLOD=5.8251;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,27:28:72.09:768,72,0	1/1:1,12:13:30:316,30,0	0/0:7,1:4:8.99:0,9,74	0/1:20,0:17:10.36:10,0,131	1/1:4,26:30:72.07:755,72,0	1/1:2,20:22:54.15:597,54,0	1/1:4,6:10:18.05:199,18,0	1/1:6,19:25:51.12:553,51,0	1/1:3,13:16:13.35:312,13,0	1/1:7,22:29:64.69:701,65,0	1/1:4,21:25:57.15:631,57,0	1/1:2,13:15:11.30:339,11,0	1/1:3,22:25:63.17:697,63,0	1/1:0,14:14:42.11:465,42,0	0/0:12,0:12:26.93:0,27,234	1/1:0,12:12:27.07:299,27,0	1/1:5,23:28:54.15:596,54,0	1/1:5,6:11:18.05:199,18,0	1/1:4,15:19:44.95:478,45,0	1/1:5,29:34:87.24:962,87,0	1/1:3,10:13:30.08:332,30,0	1/1:3,18:21:28.08:531,28,0	1/1:1,25:27:78.04:841,78,0	1/1:1,7:9:14.04:193,14,0	1/1:4,18:22:51.14:564,51,0	1/1:3,24:27:72.19:796,72,0	1/1:7,24:29:63.14:682,63,0	1/1:0,19:19:54.15:597,54,0
chr10	32704588	.	CAA	C	6103.94	PASS	AB=0.691;AC=45;AF=0.804;AN=56;BaseQRankSum=-3.937;DP=524;FS=23.282;HRun=15;HaplotypeScore=84.1067;InbreedingCoeff=0.1968;MQ=67.98;MQ0=5;MQRankSum=0.190;QD=12.99;ReadPosRankSum=4.664;VQSLOD=1.9718;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,18:26:20.66:382,21,0	1/1:2,5:8:20.73:169,21,0	0/1:30,1:15:8.15:8,0,52	0/0:27,0:14:6:0,6,107	1/1:5,22:30:43.17:448,43,0	1/1:4,8:13:2.92:103,3,0	1/1:9,13:22:26.60:237,27,0	0/1:12,8:22:5.58:175,0,6	1/1:15,9:26:15.54:394,16,0	1/1:8,4:11:14.85:128,15,0	1/1:3,10:16:17.21:227,17,0	1/1:4,10:14:27.89:270,28,0	1/1:8,9:17:35.82:313,36,0	1/1:6,3:10:14.72:167,15,0	0/0:22,0:24:55:0,55,518	0/1:7,6:14:8.70:201,0,9	0/1:16,11:27:5.32:335,0,5	1/1:3,8:14:17.38:232,17,0	1/1:10,16:25:32.87:355,33,0	0/1:7,6:18:26.05:135,0,26	1/1:4,12:17:43.35:362,43,0	0/1:3,10:15:17.71:200,0,18	0/1:6,6:12:16.62:156,0,17	1/1:3,6:9:11.92:106,12,0	1/1:5,6:10:17.91:158,18,0	1/1:3,16:19:28.34:353,28,0	1/1:13,13:28:25.66:357,26,0	1/1:5,6:11:14.83:132,15,0
chr10	32705145	.	TA	T	5206.56	PASS	AB=0.806;AC=49;AF=0.875;AN=56;BaseQRankSum=1.951;DP=514;FS=2.401;HRun=14;HaplotypeScore=55.2274;InbreedingCoeff=0.4413;MQ=73.06;MQ0=5;MQRankSum=0.351;QD=10.76;ReadPosRankSum=3.151;VQSLOD=4.5694;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,22:31:29.77:333,30,0	1/1:0,6:6:17.86:123,18,0	0/1:26,0:16:1.14:1,0,44	0/0:15,0:8:2.97:0,3,20	1/1:8,15:23:16.40:249,16,0	1/1:3,15:19:37.63:252,38,0	1/1:1,9:10:14.87:103,15,0	1/1:12,17:28:19.57:276,20,0	1/1:1,7:8:0.74:121,1,0	0/1:14,7:21:7.15:100,0,7	1/1:4,11:15:26.61:176,27,0	1/1:4,15:20:34.69:232,35,0	1/1:6,13:19:29.17:204,29,0	1/1:5,14:19:35.61:247,36,0	0/0:15,0:15:39.01:0,39,347	1/1:2,13:16:9.88:204,10,0	1/1:13,15:29:26.98:253,27,0	1/1:1,10:11:17.85:123,18,0	0/1:11,11:22:16.23:202,0,16	1/1:7,9:16:16.14:212,16,0	1/1:2,13:15:35.68:247,36,0	1/1:3,5:8:14.87:103,15,0	1/1:4,13:17:32.69:226,33,0	1/1:4,17:23:39.75:318,40,0	1/1:4,9:14:22.72:150,23,0	1/1:8,20:28:52.84:380,53,0	1/1:13,22:35:3.67:311,4,0	1/1:1,3:4:8.92:62,9,0
chr10	32710517	.	TGCC	T	85.51	PASS	AB=0.762;AC=2;AF=0.036;AN=56;BaseQRankSum=2.144;DP=324;FS=2.229;HRun=0;HaplotypeScore=109.5329;InbreedingCoeff=-0.0417;MQ=74.04;MQ0=0;MQRankSum=-3.535;QD=3.89;ReadPosRankSum=-0.084;VQSLOD=2.4172;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:33.07:0,33,673	0/0:4,1:5:11.82:0,12,259	0/0:14,0:12:42.14:0,42,895	0/0:9,0:7:27.09:0,27,603	0/0:16,0:16:36.18:0,36,814	0/0:9,1:10:26.88:0,27,661	0/0:8,0:8:21.07:0,21,516	0/1:15,3:18:90.71:91,0,1020	0/0:14,0:14:39.09:0,39,839	0/0:12,0:12:36.12:0,36,880	0/0:10,4:14:26.54:0,27,663	0/0:12,2:14:35.65:0,36,834	0/0:10,1:11:29.87:0,30,683	0/0:18,0:18:51.17:0,51,1154	0/0:8,0:8:18.06:0,18,419	0/0:5,2:7:14.40:0,14,299	0/0:9,0:9:27.09:0,27,640	0/0:5,0:5:12.04:0,12,295	0/0:10,0:10:30.10:0,30,693	0/0:16,1:17:40.87:0,41,1098	0/0:9,0:9:18.53:0,19,428	0/0:12,0:12:36.12:0,36,852	0/0:12,2:14:33.11:0,33,810	0/0:6,0:6:14.65:0,15,368	0/0:10,2:12:26.87:0,27,731	0/0:17,0:17:51.18:0,51,1251	0/0:19,0:19:54.18:0,54,1291	0/1:2,2:4:83.58:84,0,136
chr10	32710580	.	C	CCT	8942.21	PASS	AB=0.964;AC=52;AF=0.929;AN=56;BaseQRankSum=6.987;DP=502;FS=1.332;HRun=0;HaplotypeScore=169.3663;InbreedingCoeff=-0.0829;MQ=80.92;MQ0=0;MQRankSum=-1.331;QD=17.81;ReadPosRankSum=9.513;VQSLOD=4.4749;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:32,1:33:5.12:399,5,0	1/1:7,0:7:16.98:124,17,0	0/1:19,1:20:99:256,0,123	0/1:17,2:19:6.33:304,0,6	1/1:23,0:23:50.60:371,51,0	1/1:15,0:15:19.25:256,19,0	1/1:22,0:22:22.66:239,23,0	1/1:22,0:22:28.89:416,29,0	0/1:12,0:12:8.46:189,0,8	1/1:13,0:13:39.03:399,39,0	1/1:16,0:16:24.90:316,25,0	1/1:19,0:19:47.60:355,48,0	1/1:13,0:13:20.15:211,20,0	1/1:20,0:20:48.61:370,49,0	1/1:17,0:17:27.03:342,27,0	1/1:15,0:15:14.30:237,14,0	1/1:24,0:24:67.05:547,67,0	1/1:14,0:14:4.98:270,5,0	1/1:20,0:20:26.50:345,26,0	1/1:18,0:18:22.65:311,23,0	1/1:21,0:21:47.89:390,48,0	1/1:19,0:19:29.01:373,29,0	1/1:17,0:17:40.41:384,40,0	1/1:14,0:14:26.84:206,27,0	1/1:24,0:24:13.74:406,14,0	1/1:22,0:22:51.74:505,52,0	1/1:18,0:18:29.91:356,30,0	0/1:5,0:5:17.40:65,0,17
chr10	32711403	.	A	AGCCTTTTTGCAAATGTATT	112075.78	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-1.856;DP=743;FS=7.039;HRun=0;HaplotypeScore=315.2235;InbreedingCoeff=0.9740;MQ=80.04;MQ0=0;MQRankSum=-14.246;QD=172.16;ReadPosRankSum=2.409;VQSLOD=3.6767;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:27,5:38:75.21:5323,75,0	1/1:12,7:22:57.06:4174,57,0	0/0:30,0:30:84.29:0,84,3299	0/0:28,0:28:22.23:0,22,2829	1/1:27,11:39:99:5893,99,0	1/1:22,7:29:78.23:4956,78,0	1/1:17,2:20:54.18:3484,54,0	1/1:46,0:46:99:8311,126,0	1/1:11,9:21:63.13:4248,63,0	1/1:25,11:41:99:7854,117,0	1/1:14,4:21:54.19:3274,54,0	1/1:12,8:24:63.22:5011,63,0	1/1:22,14:40:99:8138,102,0	1/1:12,9:23:66.23:5030,66,0	0/0:34,0:34:99:0,99,4670	1/1:17,7:31:69.24:5643,69,0	1/1:9,2:14:30.10:2379,30,0	1/1:5,1:9:18.06:1401,18,0	1/1:21,0:22:48.16:1842,48,0	1/1:23,8:35:96.28:5710,96,0	1/1:6,2:13:20.99:1212,21,0	1/1:23,7:35:93.28:5716,93,0	1/1:11,7:22:51.13:3180,51,0	1/1:7,7:15:33.11:2502,33,0	1/1:14,11:27:72.25:5695,72,0	1/1:17,4:28:72.17:4057,72,0	1/1:16,9:30:78.22:6314,78,0	1/1:2,1:5:9.03:729,9,0
chr10	32712162	.	TAAGAA	T	27690.05	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=6.396;DP=628;FS=23.134;HRun=0;HaplotypeScore=219.2849;InbreedingCoeff=0.9401;MQ=66.64;MQ0=8;MQRankSum=-11.154;QD=53.15;ReadPosRankSum=6.182;VQSLOD=3.5781;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,18:26:59.06:1182,59,0	1/1:0,10:10:30.10:639,30,0	0/0:30,0:27:48.18:0,48,1708	0/0:42,0:37:40.55:0,41,1966	1/1:3,20:23:57.20:1214,57,0	1/1:6,18:21:60.21:1241,60,0	1/1:0,12:12:36.12:742,36,0	1/1:5,23:28:72.20:1360,72,0	1/1:3,24:27:75.26:1574,75,0	1/1:6,26:32:96.33:2023,96,0	1/1:6,14:19:54.18:1084,54,0	1/1:5,20:25:66.23:1368,66,0	1/1:7,22:29:75.26:1529,75,0	1/1:4,18:22:60.18:1237,60,0	0/0:33,0:33:90.29:0,90,2574	1/1:7,15:21:51.17:1015,51,0	1/1:2,16:18:36.12:761,36,0	1/1:0,11:11:33.11:703,33,0	1/1:1,12:13:36.12:727,36,0	1/1:3,21:24:69.24:1438,69,0	1/1:0,15:15:30.10:566,30,0	1/1:5,19:24:63.21:1261,63,0	1/1:0,19:19:48.16:915,48,0	1/1:2,23:24:49.05:1025,49,0	1/1:3,21:23:63.21:1261,63,0	1/1:2,18:20:57.14:1197,57,0	1/1:2,23:25:75.26:1564,75,0	1/1:1,1:1:3.01:64,3,0
chr10	32712206	.	AGGGGAAGGGGGAAG	A	28642.91	PASS	AB=0.955;AC=49;AF=0.875;AN=56;BaseQRankSum=-2.396;DP=611;FS=0.604;HRun=0;HaplotypeScore=306.6515;InbreedingCoeff=0.1766;MQ=53.97;MQ0=6;MQRankSum=-4.210;QD=50.52;ReadPosRankSum=3.058;VQSLOD=4.0425;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:19,0:19:13.79:14,0,190	1/1:4,6:10:12.04:490,12,0	0/0:44,0:18:24.10:0,24,434	0/1:47,0:23:25.69:26,0,209	1/1:6,17:23:42.14:1344,42,0	1/1:7,20:27:33.11:1346,33,0	1/1:7,14:21:12.04:465,12,0	0/1:15,1:16:13.97:526,0,14	1/1:6,28:34:54.11:2671,54,0	1/1:9,18:27:48.16:1719,48,0	1/1:4,11:15:24.04:716,24,0	1/1:5,22:27:45.15:1777,45,0	1/1:6,19:25:45.15:1797,45,0	1/1:7,15:21:42.14:1655,42,0	0/1:21,0:21:11.54:12,0,1346	1/1:1,25:26:56.92:2301,57,0	1/1:10,1:11:12.04:422,12,0	1/1:6,1:7:6.02:230,6,0	1/1:11,1:12:9.03:290,9,0	1/1:8,16:24:38.87:1287,39,0	1/1:13,0:12:12.01:368,12,0	1/1:8,17:25:42.10:1400,42,0	1/1:2,13:15:27.09:1068,27,0	1/1:6,2:8:9.03:261,9,0	1/1:8,20:28:33.11:1297,33,0	1/1:7,20:28:6.25:2241,6,0	1/1:6,25:31:69.23:2806,69,0	0/1:4,1:5:4.12:115,0,4
chr10	32712219	.	AG	A	4937.04	PASS	AB=0.844;AC=52;AF=0.929;AN=56;BaseQRankSum=2.892;DP=481;FS=2.712;HRun=5;HaplotypeScore=219.6013;InbreedingCoeff=-0.0756;MQ=57.88;MQ0=6;MQRankSum=-1.322;QD=10.26;ReadPosRankSum=4.631;VQSLOD=1.5673;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:16,0:16:11.27:35,0,11	1/1:6,0:6:9.98:36,10,0	0/1:36,4:16:89.46:131,0,89	0/1:30,9:18:1.33:202,0,1	1/1:17,0:17:39.50:302,40,0	1/1:20,0:20:27.45:98,27,0	1/1:14,0:14:10.49:55,10,0	0/1:7,7:14:5.49:241,0,5	1/1:30,0:30:55.91:229,56,0	1/1:18,0:18:42.85:275,43,0	1/1:12,0:11:22.48:169,22,0	1/1:22,0:22:40.03:228,40,0	1/1:20,0:20:37.50:166,38,0	1/1:16,0:15:36.96:196,37,0	1/1:4,16:20:51.06:516,51,0	1/1:25,0:25:47.92:189,48,0	1/1:3,5:8:20.49:186,20,0	1/1:1,2:3:8.51:69,9,0	1/1:6,2:8:14.10:148,14,0	1/1:17,0:17:27.28:165,27,0	1/1:1,7:7:15.03:151,15,0	1/1:17,0:17:37.96:245,38,0	1/1:13,0:13:22.96:97,23,0	1/1:4,2:6:7.51:86,8,0	1/1:20,0:20:28.97:155,29,0	1/1:22,0:22:35.39:252,35,0	1/1:26,0:26:58.28:239,58,0	1/1:3,0:3:8.51:77,9,0
chr10	32713788	.	C	CATTTATTTATTT	9596.10	PASS	AC=46;AF=1.000;AN=46;DP=282;FS=0.000;HRun=0;HaplotypeScore=86.0760;InbreedingCoeff=-0.1044;MQ=78.50;MQ0=2;QD=39.82;VQSLOD=4.3142;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:14:9.03:350,9,0	1/1:5,0:7:3.01:157,3,0	./.	./.	1/1:9,1:10:6.02:281,6,0	1/1:6,5:10:15.05:873,15,0	1/1:6,0:6:3.01:160,3,0	1/1:29,0:29:39.12:1067,39,0	1/1:9,2:11:9.03:524,9,0	1/1:9,2:11:15.04:540,15,0	./.	1/1:8,1:9:3.01:174,3,0	1/1:5,0:5:3.01:175,3,0	1/1:5,3:8:3.01:175,3,0	1/1:4,0:6:3.01:157,3,0	1/1:7,1:8:3.01:175,3,0	1/1:9,4:17:12.04:698,12,0	1/1:10,0:10:12.04:501,12,0	1/1:14,2:15:15.04:626,15,0	1/1:8,1:9:3.01:174,3,0	./.	./.	1/1:6,2:8:3.01:175,3,0	1/1:5,1:6:6.02:301,6,0	1/1:11,5:16:21.07:1130,21,0	1/1:8,1:9:6.02:325,6,0	1/1:8,2:10:6.02:349,6,0	1/1:2,2:5:9.03:511,9,0
chr10	32715548	.	T	TTC	89.76	PASS	AC=14;AF=0.467;AN=30;BaseQRankSum=-1.788;DP=80;FS=19.956;HRun=0;HaplotypeScore=18.2039;InbreedingCoeff=0.3423;MQ=19.28;MQ0=45;MQRankSum=-0.689;QD=4.99;ReadPosRankSum=2.793;VQSLOD=0.6222;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:3:2.83:22,3,0	./.	./.	./.	./.	0/0:4,0:3:0.47:0,0,1	1/1:1,0:1:2.99:23,3,0	./.	0/0:1,0:1:0.47:0,0,1	0/0:2,0:1:2.22:0,2,7	./.	1/1:1,0:1:2.99:23,3,0	./.	0/0:5,0:5:5.93:0,6,40	0/0:7,0:2:2.97:0,3,20	1/1:2,1:2:2.87:28,3,0	0/0:2,0:1:0.47:0,0,1	1/1:1,2:3:2.88:46,3,0	1/1:4,0:1:2.98:22,3,0	./.	0/0:1,1:2:0.44:0,0,1	./.	./.	0/0:2,0:2:2.97:0,3,20	./.	1/1:2,0:2:2.89:22,3,0	./.	./.
chr10	32715558	.	CTT	C	634.95	PASS	AC=26;AF=0.765;AN=34;BaseQRankSum=2.718;DP=90;FS=0.000;HRun=10;HaplotypeScore=16.6679;InbreedingCoeff=0.2936;MQ=22.95;MQ0=41;MQRankSum=-1.296;QD=13.80;ReadPosRankSum=0.544;VQSLOD=-0.4063;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,4:4:6.01:67,6,0	1/1:2,0:1:3.01:32,3,0	./.	./.	./.	1/1:5,1:2:6.02:65,6,0	0/0:1,0:1:0:0,0,0	./.	1/1:2,1:3:9.02:96,9,0	1/1:1,2:2:3:33,3,0	1/1:3,0:1:3.01:32,3,0	0/0:1,0:1:0:0,0,0	./.	1/1:2,4:6:9.02:99,9,0	0/0:9,0:4:9.03:0,9,128	1/1:1,1:2:3.01:33,3,0	1/1:0,2:1:3.01:33,3,0	1/1:4,1:3:6.01:66,6,0	0/0:1,0:1:0:0,0,0	./.	1/1:1,1:2:3.01:33,3,0	./.	./.	1/1:0,2:2:2.95:33,3,0	./.	1/1:1,4:4:9.01:100,9,0	./.	./.
chr10	32716011	.	CT	C	203.24	PASS	AC=10;AF=1.00;AN=10;DP=1068;FS=0.000;HRun=1;HaplotypeScore=7.8986;MQ=3.18;MQ0=1034;QD=3.28;VQSLOD=-0.4147;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	1/1:8,4:1:3.01:42,3,0	./.	./.	./.	./.	./.	1/1:12,2:2:3.01:42,3,0	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	1/1:9,3:3:6.02:84,6,0	1/1:16,1:1:3.01:42,3,0	./.	1/1:5,2:2:5.98:62,6,0	./.	./.	./.
chr10	32722163	.	GT	G	45.71	PASS	AB=1.000;AC=7;AF=0.583;AN=12;BaseQRankSum=-0.729;DP=32;FS=2.808;HRun=1;HaplotypeScore=18.9437;MQ=101.38;MQ0=7;MQRankSum=-1.307;QD=3.05;ReadPosRankSum=0.729;VQSLOD=-0.3612;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	1/1:0,1:1:3.01:39,3,0	0/0:6,0:1:3.01:0,3,45	0/1:12,0:5:15.51:16,0,42	./.	./.	./.	./.	./.	1/1:1,0:1:3.01:31,3,0	./.	0/0:1,0:1:3.01:0,3,40	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	1/1:0,1:1:3.01:39,3,0	./.	./.
chr10	32725607	.	G	GCACACACACACA	6955.14	PASS	AB=0.955;AC=44;AF=0.786;AN=56;BaseQRankSum=2.290;DP=454;FS=1.293;HRun=0;HaplotypeScore=138.0160;InbreedingCoeff=0.3998;MQ=49.21;MQ0=3;MQRankSum=-0.438;QD=17.43;ReadPosRankSum=-0.050;VQSLOD=3.7584;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:24:5.70:326,6,0	1/1:14,0:12:3.48:49,3,0	0/1:10,0:6:0.66:1,0,12	0/1:11,0:5:3.92:4,0,10	0/0:23,0:23:0:0,0,0	1/1:19,0:18:9.01:261,9,0	1/1:12,0:11:5.67:98,6,0	1/1:26,0:23:21.90:357,22,0	1/1:11,0:11:3.01:161,3,0	1/1:21,0:21:18.05:642,18,0	1/1:16,0:16:5.62:226,6,0	0/1:19,0:19:0:0,0,0	1/1:16,0:15:8.74:489,9,0	1/1:13,0:13:3.01:50,3,0	0/0:8,0:8:18.05:0,18,505	0/0:8,0:8:0:0,0,0	1/1:20,0:20:17.42:657,17,0	1/1:16,0:16:12.04:539,12,0	1/1:20,0:18:4.26:253,4,0	1/1:21,0:21:5.62:273,6,0	0/1:14,1:16:0:0,0,0	0/0:16,0:16:3.48:0,3,84	1/1:21,0:21:8.92:296,9,0	1/1:13,0:13:2.37:160,2,0	1/1:11,0:10:3.01:160,3,0	1/1:22,0:22:18.51:693,19,0	1/1:11,0:11:12.04:586,12,0	1/1:14,0:14:15.05:673,15,0
chr10	32725611	.	A	ACACACACACACG	8708.82	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=-1.945;DP=508;FS=4.420;HRun=0;HaplotypeScore=137.6113;InbreedingCoeff=0.5446;MQ=48.96;MQ0=6;MQRankSum=0.711;QD=21.61;ReadPosRankSum=1.764;VQSLOD=3.9786;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:6,18:27:5.96:354,6,0	1/1:10,0:11:10.12:107,10,0	0/0:12,0:7:10.97:0,11,89	0/0:12,0:5:6.12:0,6,53	0/0:2,19:27:0:0,0,0	1/1:4,15:28:8.52:275,9,0	1/1:13,0:12:11.67:197,12,0	1/1:24,0:21:16.36:474,16,0	1/1:2,8:13:2.88:179,3,0	1/1:7,13:30:50.58:1121,51,0	1/1:5,8:20:5.59:256,6,0	0/0:5,13:20:2.54:0,3,10	1/1:2,14:18:8.88:523,9,0	1/1:11,0:11:11.96:110,12,0	0/0:7,0:7:21.05:0,21,597	0/0:2,6:10:0:0,0,0	1/1:8,11:24:17.01:682,17,0	1/1:14,1:15:1.10:844,1,0	1/1:8,14:22:19.21:496,19,0	1/1:9,12:22:5.20:300,5,0	1/1:16,1:15:7.66:54,8,0	0/0:3,9:17:3.48:0,3,83	1/1:21,1:22:8.93:340,9,0	1/1:2,11:18:2.37:178,2,0	1/1:2,8:13:3.01:178,3,0	1/1:6,15:23:33.13:674,33,0	1/1:4,6:11:3.62:641,4,0	1/1:1,9:13:15.05:726,15,0
chr10	32725613	.	A	ACACACACACG	6859	PASS	AB=0.922;AC=34;AF=0.607;AN=56;BaseQRankSum=1.211;DP=519;FS=3.552;HRun=0;HaplotypeScore=139.9973;InbreedingCoeff=0.0696;MQ=48.44;MQ0=8;MQRankSum=-1.306;QD=16.53;ReadPosRankSum=5.206;VQSLOD=3.1628;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:27:16.02:253,0,16	0/1:13,0:11:23.08:52,0,23	0/0:15,0:9:10.64:0,11,127	0/0:13,0:5:4.78:0,5,48	0/0:27,0:27:0:0,0,1	1/1:27,0:26:9.03:272,9,0	1/1:11,1:12:11.60:178,12,0	0/1:23,0:20:9.36:316,0,9	1/1:15,0:15:2.87:133,3,0	0/1:31,0:30:23.06:705,0,23	1/1:17,2:19:5.65:267,6,0	0/0:20,0:21:2.54:0,3,10	0/1:19,0:18:12.93:373,0,13	1/1:11,0:11:11.96:145,12,0	0/0:7,0:7:18.06:0,18,518	0/1:8,0:8:0.06:0,0,0	1/1:21,2:23:4.05:560,4,0	0/1:9,7:16:16.86:691,0,17	0/1:27,0:24:14.14:369,0,14	0/1:20,1:21:16.53:222,0,17	1/1:17,0:15:7.33:54,7,0	0/0:20,0:20:9:0,9,123	0/1:6,14:26:15.38:274,0,15	1/1:18,0:18:2.54:132,3,0	1/1:14,0:13:3.01:133,3,0	1/1:23,0:23:25.34:583,25,0	1/1:10,1:11:3.44:541,3,0	1/1:13,0:13:15.05:606,15,0
chr10	32733203	.	GA	G	9045.56	PASS	AB=0.768;AC=51;AF=0.911;AN=56;BaseQRankSum=-2.806;DP=451;FS=2.823;HRun=9;HaplotypeScore=93.1334;InbreedingCoeff=0.4825;MQ=69.90;MQ0=0;MQRankSum=-2.231;QD=20.84;ReadPosRankSum=3.733;VQSLOD=5.3013;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,20:20:48.01:439,48,0	0/1:1,8:9:7.57:191,0,8	0/1:15,1:16:2.37:2,0,187	0/1:4,0:5:10.89:11,0,52	1/1:4,20:23:48:439,48,0	1/1:2,17:19:48.02:438,48,0	1/1:2,13:15:36.02:328,36,0	1/1:10,26:37:80.06:720,80,0	1/1:0,8:8:21.01:192,21,0	1/1:0,13:13:39.02:357,39,0	1/1:2,18:20:45.02:412,45,0	1/1:4,7:11:21.01:192,21,0	1/1:2,17:19:35.99:329,36,0	1/1:1,11:12:30.01:274,30,0	0/0:17,0:17:45.06:0,45,490	1/1:3,17:20:45.01:411,45,0	1/1:1,6:7:21.01:192,21,0	1/1:3,4:7:12:110,12,0	1/1:4,13:17:39.02:357,39,0	1/1:2,19:22:59.07:527,59,0	1/1:0,11:11:27:246,27,0	1/1:1,17:18:48.03:438,48,0	1/1:2,15:17:45.02:412,45,0	1/1:0,9:9:14.83:137,15,0	1/1:3,16:19:48.02:439,48,0	1/1:0,23:23:69.04:631,69,0	1/1:4,23:27:66.03:603,66,0	1/1:0,9:9:24.01:220,24,0
chr10	32733346	.	A	AGAT	1089.61	PASS	AB=0.583;AC=30;AF=0.536;AN=56;BaseQRankSum=-1.347;DP=368;FS=12.192;HRun=0;HaplotypeScore=220.2780;InbreedingCoeff=0.0596;MQ=46.10;MQ0=0;MQRankSum=3.013;QD=3.67;ReadPosRankSum=-3.056;VQSLOD=1.1286;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:2,0:13:2.02:49,0,2	0/0:1,0:5:0.71:0,1,4	0/1:4,1:5:53.04:66,0,53	0/0:1,0:1:3.01:0,3,31	0/1:5,0:29:34.02:53,0,34	0/1:4,0:17:1.02:44,0,1	0/1:1,0:6:3.74:9,0,4	1/1:10,0:29:61.35:390,61,0	0/0:0,0:10:4.37:0,4,11	1/1:3,0:20:27.38:97,27,0	0/1:3,0:20:32.11:32,0,33	0/1:1,0:11:3.67:30,0,4	0/1:3,0:18:6.90:51,0,7	0/1:5,0:11:5.83:61,0,6	0/1:6,0:13:3.73:31,0,4	0/1:3,0:17:1.06:35,0,1	0/0:3,0:5:2.13:0,2,5	1/1:0,0:5:5.72:14,6,0	1/1:0,0:10:18.71:56,19,0	0/0:1,0:26:12.13:0,12,31	1/1:1,0:2:2.64:11,3,0	0/0:0,0:10:9:0,9,27	0/1:1,0:15:12.12:12,0,32	1/1:0,0:2:1.77:16,2,0	0/0:5,0:14:2.66:0,3,7	1/1:3,0:20:24.61:103,25,0	1/1:1,0:24:2.35:73,2,0	1/1:1,0:6:2.25:6,2,0
chr10	32733369	.	A	ATGT	633.15	PASS	AB=0.583;AC=48;AF=0.960;AN=50;BaseQRankSum=0.512;DP=164;FS=10.127;HRun=0;HaplotypeScore=222.0781;InbreedingCoeff=0.3432;MQ=41.10;MQ0=0;MQRankSum=-0.744;QD=3.91;ReadPosRankSum=0.171;VQSLOD=1.5144;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:1,6:7:10.76:38,11,0	1/1:0,3:3:1.06:4,1,0	0/1:1,0:2:0.66:48,0,1	./.	1/1:0,12:12:5.05:9,5,0	1/1:0,8:8:11.20:25,11,0	1/1:0,1:1:1.25:3,1,0	1/1:0,1:1:0.47:1,0,0	1/1:0,8:8:12.13:28,12,0	1/1:0,11:11:28.64:119,29,0	1/1:0,13:13:5.12:9,5,0	1/1:0,7:7:9.96:23,10,0	1/1:1,10:11:14.94:50,15,0	1/1:0,3:3:3.38:7,3,0	1/1:1,5:6:9.24:63,9,0	1/1:0,7:7:10.88:26,11,0	1/1:0,3:3:2.96:6,3,0	1/1:0,1:1:2.50:9,2,0	1/1:0,4:4:10.78:44,11,0	1/1:0,9:9:11.16:24,11,0	1/1:0,1:1:1.25:3,1,0	1/1:0,6:6:4.43:8,4,0	0/1:0,8:8:0.57:1,0,9	./.	1/1:0,4:4:5.60:13,6,0	1/1:0,9:9:21.66:72,22,0	1/1:0,16:17:29.33:85,29,0	./.
chr10	32733900	.	TTTA	T	17373.53	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=7.805;DP=438;FS=2.473;HRun=0;HaplotypeScore=101.7007;InbreedingCoeff=0.9193;MQ=63.23;MQ0=0;MQRankSum=-3.981;QD=42.69;ReadPosRankSum=3.649;VQSLOD=6.0023;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,10:11:27.09:460,27,0	1/1:0,3:3:6.02:101,6,0	0/0:8,0:8:24.07:0,24,486	0/0:4,0:4:9.03:0,9,172	1/1:0,30:28:72.16:1163,72,0	1/1:1,19:20:51.17:858,51,0	1/1:0,12:12:21.07:358,21,0	1/1:1,33:34:99:1579,99,0	1/1:0,21:21:60.21:1023,60,0	1/1:2,18:20:54.14:853,54,0	1/1:2,23:25:60.21:1021,60,0	1/1:0,16:16:48.16:818,48,0	1/1:3,11:14:33.11:563,33,0	1/1:1,12:13:36.12:604,36,0	0/0:19,0:19:57.20:0,57,1222	1/1:1,17:18:45.15:767,45,0	1/1:0,16:16:39.13:664,39,0	1/1:2,15:17:39.13:665,39,0	1/1:1,10:11:30.09:480,30,0	1/1:0,11:11:30.10:511,30,0	1/1:1,5:6:9.03:154,9,0	1/1:1,9:10:27.09:460,27,0	1/1:0,11:11:24.08:409,24,0	1/1:0,13:13:32.89:549,33,0	1/1:0,18:18:45.15:767,45,0	1/1:1,17:18:51.14:809,51,0	1/1:1,28:29:72.25:1227,72,0	1/1:1,9:10:30.10:510,30,0
chr10	32734205	.	CT	C	9781.94	PASS	AB=0.833;AC=53;AF=0.946;AN=56;BaseQRankSum=4.931;DP=478;FS=0.000;HRun=1;HaplotypeScore=240.0747;InbreedingCoeff=-0.0506;MQ=40.64;MQ0=0;MQRankSum=-4.944;QD=20.46;ReadPosRankSum=5.897;VQSLOD=4.5078;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:0,9:9:0.04:119,0,0	1/1:0,8:8:23.92:184,24,0	0/1:4,0:4:12.06:17,0,12	0/1:5,0:5:21.84:22,0,55	1/1:3,27:30:55.82:605,56,0	1/1:0,27:27:80.75:634,81,0	1/1:2,11:13:29.84:230,30,0	1/1:4,25:29:81.70:558,82,0	1/1:2,16:18:28.80:369,29,0	1/1:2,16:18:3.57:278,4,0	1/1:0,27:27:77.82:630,78,0	1/1:2,20:22:59.55:462,60,0	1/1:0,23:23:68.75:535,69,0	1/1:1,13:14:15.93:284,16,0	1/1:1,24:25:74.74:587,75,0	1/1:1,20:21:62.71:484,63,0	1/1:1,6:7:0.87:113,1,0	1/1:0,7:7:20.90:157,21,0	1/1:1,15:16:41.30:283,41,0	1/1:2,26:28:80.53:617,81,0	1/1:1,6:7:8.98:71,9,0	1/1:1,11:12:35.81:280,36,0	1/1:1,19:20:56.63:446,57,0	1/1:1,7:8:17.89:139,18,0	1/1:1,16:17:47.75:367,48,0	1/1:1,22:23:68.22:473,68,0	1/1:3,33:36:79.48:749,79,0	1/1:0,4:4:11.95:90,12,0
chr10	32735173	.	GC	G	8051.68	PASS	AB=1.000;AC=51;AF=0.911;AN=56;BaseQRankSum=8.352;DP=531;FS=2.478;HRun=1;HaplotypeScore=243.4040;InbreedingCoeff=0.8522;MQ=83.93;MQ0=0;MQRankSum=-9.339;QD=16.53;ReadPosRankSum=4.991;VQSLOD=4.9963;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:19:45.73:299,46,0	1/1:10,0:10:29.48:193,29,0	0/0:21,0:21:24.05:0,24,363	0/1:23,0:23:1.69:2,0,332	1/1:30,0:30:82.32:519,82,0	1/1:25,0:25:68:464,68,0	1/1:23,0:23:50.93:318,51,0	1/1:26,0:26:68.37:374,68,0	1/1:7,0:7:20.66:136,21,0	1/1:2,15:17:23.34:252,23,0	1/1:23,0:23:67.93:467,68,0	1/1:21,0:20:56.26:391,56,0	1/1:21,0:21:50.23:340,50,0	1/1:14,0:13:38.52:273,39,0	0/0:23,0:23:11.33:0,11,94	1/1:15,0:15:44.19:288,44,0	1/1:19,0:19:53.27:360,53,0	1/1:5,0:5:14.86:104,15,0	1/1:28,0:28:36.17:376,36,0	1/1:24,0:24:68.75:492,69,0	1/1:13,0:13:29.45:188,29,0	1/1:16,0:16:44.23:291,44,0	1/1:19,0:19:53.01:342,53,0	1/1:14,0:14:38.37:252,38,0	1/1:26,0:26:67.73:451,68,0	1/1:18,0:18:31.79:264,32,0	1/1:22,0:22:62.28:440,62,0	1/1:9,0:9:26.60:175,27,0
chr10	32736836	.	T	TCTTC	13549.48	PASS	AB=0.909;AC=45;AF=0.804;AN=56;BaseQRankSum=-4.740;DP=616;FS=4.501;HRun=0;HaplotypeScore=159.2542;InbreedingCoeff=0.4339;MQ=53.47;MQ0=5;MQRankSum=4.155;QD=24.55;ReadPosRankSum=9.676;VQSLOD=3.7885;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:24:44.66:380,45,0	1/1:9,0:9:1.28:270,1,0	0/0:20,0:12:18.05:0,18,282	0/0:22,0:12:33.11:0,33,520	1/1:26,2:28:58.77:706,59,0	0/1:16,0:15:5.12:288,0,5	1/1:15,0:15:33.01:390,33,0	1/1:28,0:27:65.77:666,66,0	1/1:21,0:20:31.20:641,31,0	0/1:30,0:31:14.35:801,0,14	1/1:28,1:29:46.29:863,46,0	1/1:26,0:26:34.55:473,35,0	1/1:29,0:29:42.46:787,42,0	1/1:20,0:20:31.76:629,32,0	0/0:22,0:22:29.75:0,30,440	1/1:14,0:13:17.96:291,18,0	1/1:12,0:12:17.57:257,18,0	0/1:6,14:21:15.94:56,0,16	1/1:17,0:14:37.73:442,38,0	0/1:33,0:33:4.75:676,0,5	1/1:11,0:11:32.97:373,33,0	1/1:17,0:17:33.30:602,33,0	1/1:31,0:30:68.06:957,68,0	1/1:15,0:15:35.75:423,36,0	1/1:33,0:33:7.30:781,7,0	0/1:25,0:26:9.37:559,0,9	1/1:27,0:27:42.72:718,43,0	1/1:18,0:18:44.50:517,45,0
chr10	32736848	.	C	CCTTT	5606.21	PASS	AB=1.000;AC=51;AF=0.981;AN=52;BaseQRankSum=-1.181;DP=628;FS=5.684;HRun=0;HaplotypeScore=194.8542;InbreedingCoeff=-0.0313;MQ=47.98;MQ0=7;MQRankSum=-0.942;QD=9.33;ReadPosRankSum=1.457;VQSLOD=3.9494;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:20:11.82:76,12,0	1/1:10,0:10:15.33:144,15,0	./.	./.	1/1:28,0:28:32.62:320,33,0	1/1:16,0:15:9.41:89,9,0	1/1:16,0:15:24.59:167,25,0	1/1:37,0:36:40.77:255,41,0	1/1:21,0:20:26.89:239,27,0	1/1:34,0:34:37.08:332,37,0	1/1:31,0:31:43.92:364,44,0	1/1:24,0:24:13.20:97,13,0	1/1:26,0:26:33.38:314,33,0	1/1:22,0:22:25.59:265,26,0	1/1:8,16:25:9.03:216,9,0	1/1:17,0:16:11.93:101,12,0	1/1:11,0:11:13.72:94,14,0	0/1:26,0:25:56.77:57,0,68	1/1:19,0:17:21.30:169,21,0	1/1:36,0:36:36.76:300,37,0	1/1:12,0:12:12.41:97,12,0	1/1:15,0:15:20.07:206,20,0	1/1:32,0:31:52.07:471,52,0	1/1:17,0:16:14.91:173,15,0	1/1:36,0:36:38.39:341,38,0	1/1:23,0:23:31.75:302,32,0	1/1:29,0:29:30.79:260,31,0	1/1:17,0:17:18.90:159,19,0
chr10	32736943	.	T	TC	21853.93	PASS	AB=0.591;AC=49;AF=0.875;AN=56;BaseQRankSum=3.789;DP=609;FS=13.655;HRun=0;HaplotypeScore=104.1428;InbreedingCoeff=0.8598;MQ=62.48;MQ0=2;MQRankSum=-2.079;QD=39.52;ReadPosRankSum=3.711;VQSLOD=3.7286;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,15:16:42.07:610,42,0	1/1:0,9:9:24.08:367,24,0	0/0:17,0:12:26.46:0,26,294	0/0:13,0:11:26.49:0,26,299	1/1:0,35:35:90.30:1371,90,0	1/1:1,18:19:48.16:727,48,0	1/1:0,13:13:36.12:549,36,0	1/1:0,22:22:56.97:699,57,0	1/1:0,15:15:36.12:551,36,0	1/1:1,32:32:96.31:1439,96,0	1/1:0,35:35:99:1532,102,0	1/1:0,21:21:51.17:776,51,0	1/1:0,21:21:63.21:959,63,0	1/1:1,23:24:60.27:1029,60,0	0/0:26,0:26:72.22:0,72,961	1/1:1,20:22:56.22:822,56,0	0/1:4,8:13:6.83:257,0,7	1/1:2,30:31:78.26:1192,78,0	1/1:1,8:9:24.04:334,24,0	1/1:1,27:28:66.22:1009,66,0	1/1:1,15:16:42.14:643,42,0	1/1:0,20:20:54.18:826,54,0	1/1:0,17:17:51.17:780,51,0	1/1:1,20:21:48.16:730,48,0	1/1:0,32:32:87.30:1329,87,0	1/1:1,21:22:60.19:897,60,0	1/1:0,40:40:99:1698,111,0	1/1:2,16:18:44.48:728,44,0
chr10	32737476	.	TA	T	12245.46	PASS	AB=1.000;AC=51;AF=0.911;AN=56;BaseQRankSum=4.122;DP=598;FS=0.624;HRun=10;HaplotypeScore=135.6545;InbreedingCoeff=0.7652;MQ=77.12;MQ0=0;MQRankSum=-5.581;QD=21.87;ReadPosRankSum=3.414;VQSLOD=3.5954;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,20:22:56.99:495,57,0	1/1:1,12:13:32.98:286,33,0	0/0:19,0:19:10.73:0,11,287	0/1:15,0:16:14.73:15,0,198	1/1:2,15:17:44.99:390,45,0	1/1:3,29:32:89.96:777,90,0	1/1:3,13:16:41.59:348,42,0	1/1:1,24:25:68.21:556,68,0	1/1:3,20:23:62.47:530,62,0	1/1:4,28:32:83.80:713,84,0	1/1:2,20:22:62.98:544,63,0	1/1:4,16:20:47.98:416,48,0	1/1:2,16:18:47.99:416,48,0	1/1:5,21:26:68.33:566,68,0	0/0:18,0:18:51.14:0,51,564	1/1:6,22:28:62.97:546,63,0	1/1:2,10:12:29.99:260,30,0	1/1:2,17:19:47.98:416,48,0	1/1:0,12:12:35.98:308,36,0	1/1:0,31:31:86.78:742,87,0	1/1:1,10:11:18:156,18,0	1/1:5,28:33:80.78:690,81,0	1/1:4,15:19:44.98:390,45,0	1/1:0,11:11:32.99:286,33,0	1/1:4,24:28:62.98:547,63,0	1/1:1,26:27:77.44:653,77,0	1/1:0,36:36:99:911,105,0	1/1:0,11:11:32.99:286,33,0
chr10	32739738	.	ACACACACACACG	A	7452.73	PASS	AB=0.968;AC=31;AF=0.554;AN=56;BaseQRankSum=5.012;DP=575;FS=23.590;HRun=0;HaplotypeScore=227.0492;InbreedingCoeff=-0.3290;MQ=54.59;MQ0=17;MQRankSum=-3.125;QD=14.85;ReadPosRankSum=0.389;VQSLOD=2.3420;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:26:83.41:191,0,83	0/1:4,0:4:33.61:107,0,34	0/0:22,0:10:30.03:0,30,303	0/0:24,0:13:28.79:0,29,330	0/1:18,0:18:10.09:134,0,10	0/1:23,0:23:24.85:390,0,25	1/1:19,1:20:19.74:260,20,0	0/1:20,0:16:41.19:247,0,41	0/1:29,1:30:4.01:390,0,4	1/1:24,1:24:26.51:665,27,0	0/1:11,1:12:51.04:251,0,51	0/1:15,1:16:15.24:350,0,15	1/1:32,0:32:40.92:648,41,0	1/1:22,0:21:11.91:118,12,0	0/0:27,0:27:65.89:0,66,2595	0/1:20,1:21:5:388,0,5	0/1:22,1:22:21.40:382,0,21	0/1:14,0:13:13.03:256,0,13	0/1:17,0:18:19.94:289,0,20	0/1:27,0:27:99:199,0,113	0/1:18,0:17:11.85:197,0,12	0/1:14,1:15:18.86:116,0,19	1/1:9,0:9:11.87:80,12,0	0/1:15,1:16:12.23:77,0,12	0/1:16,2:18:12.90:385,0,13	0/1:26,1:27:70.17:580,0,70	0/1:38,1:39:37.66:502,0,38	1/1:7,0:7:15:251,15,0
chr10	32739740	.	ACACACACACG	A	10789.64	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=3.997;DP=515;FS=19.335;HRun=0;HaplotypeScore=183.3754;InbreedingCoeff=0.9059;MQ=57.51;MQ0=16;MQRankSum=-3.935;QD=24.25;ReadPosRankSum=-1.223;VQSLOD=2.3712;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:24:16.50:218,17,0	1/1:0,3:3:6.02:207,6,0	0/0:21,0:10:30.03:0,30,303	0/0:22,0:14:24.92:0,25,255	1/1:0,15:15:23.73:161,24,0	1/1:1,18:19:26.94:596,27,0	1/1:19,1:20:41.94:354,42,0	1/1:17,0:16:44.93:395,45,0	1/1:2,25:27:21.03:608,21,0	1/1:3,21:23:62.61:837,63,0	1/1:1,8:9:14.97:330,15,0	1/1:2,10:12:17.87:414,18,0	1/1:3,24:27:41.97:1237,42,0	1/1:1,18:18:11.91:163,12,0	0/0:27,0:27:65.90:0,66,2194	1/1:3,17:20:29.65:569,30,0	1/1:18,2:19:16.31:497,16,0	1/1:14,1:13:13.57:319,14,0	1/1:2,13:15:38.82:445,39,0	1/1:1,22:23:24.74:317,25,0	1/1:17,0:16:29.92:247,30,0	1/1:1,12:13:20.77:140,21,0	1/1:1,7:8:11.87:80,12,0	1/1:16,0:16:17.78:153,18,0	1/1:2,16:18:20.94:433,21,0	1/1:1,24:25:62.92:812,63,0	1/1:1,29:31:32.54:826,33,0	1/1:1,6:7:15:434,15,0
chr10	32740785	.	T	TCCAGATATTGTCTCAGGAAGAGAAGT	1941.86	PASS	AB=0.727;AC=31;AF=0.969;AN=32;BaseQRankSum=-1.733;DP=49;FS=0.000;HRun=0;HaplotypeScore=37.7750;InbreedingCoeff=-0.2033;MQ=129.69;MQ0=0;MQRankSum=-0.578;QD=47.36;ReadPosRankSum=0.706;VQSLOD=1.1375;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:4:6.02:75,6,0	1/1:1,0:1:3.01:40,3,0	1/1:3,0:4:6.02:224,6,0	0/1:5,1:8:12.04:1117,0,12	1/1:2,0:2:3:25,3,0	./.	1/1:1,0:1:3:25,3,0	./.	./.	1/1:4,0:4:3.01:93,3,0	1/1:3,0:3:3.01:38,3,0	./.	./.	./.	./.	1/1:1,0:1:3.01:39,3,0	./.	./.	1/1:2,0:2:3.87:25,4,0	1/1:1,0:1:3.01:79,3,0	1/1:2,0:2:5.99:118,6,0	1/1:2,0:2:3.01:38,3,0	1/1:2,0:2:3.01:38,3,0	1/1:3,0:3:3:25,3,0	./.	1/1:1,0:1:2.99:23,3,0	./.	./.
chr10	32743794	.	A	ATGTGTG	5045.79	PASS	AB=0.944;AC=49;AF=0.980;AN=50;BaseQRankSum=1.993;DP=474;FS=0.000;HRun=0;HaplotypeScore=141.8858;InbreedingCoeff=-0.0866;MQ=52.06;MQ0=23;MQRankSum=-0.210;QD=11.79;ReadPosRankSum=0.658;VQSLOD=3.6326;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:38,0:35:29.57:518,30,0	1/1:3,0:3:2.99:24,3,0	./.	./.	1/1:11,7:22:3.01:34,3,0	1/1:28,2:31:23.09:445,23,0	1/1:17,1:19:20.62:324,21,0	1/1:20,0:18:8.87:58,9,0	1/1:3,9:13:9.03:290,9,0	1/1:13,0:12:3.48:74,3,0	1/1:11,0:11:12.02:186,12,0	1/1:19,1:20:20.95:290,21,0	1/1:12,0:12:5.94:69,6,0	1/1:17,0:16:12.02:196,12,0	0/1:16,0:17:54.50:54,0,364	1/1:17,0:16:8.35:153,8,0	1/1:22,0:23:24.04:436,24,0	1/1:11,0:11:11.04:100,11,0	1/1:12,5:16:13.44:197,13,0	./.	1/1:19,0:20:12.01:198,12,0	1/1:8,0:8:6.02:147,6,0	1/1:11,0:14:3.01:39,3,0	1/1:19,0:22:18.03:297,18,0	1/1:18,0:17:8.97:70,9,0	1/1:9,13:27:51.42:666,51,0	1/1:10,0:10:6.02:114,6,0	1/1:1,0:1:3.01:68,3,0
chr10	32799091	.	C	CAGGGATTCTAGGAAATTTC	2508.20	PASS	AB=0.745;AC=4;AF=0.67;AN=6;BaseQRankSum=-0.043;DP=28;FS=9.394;HRun=0;HaplotypeScore=218.4030;MQ=220.49;MQ0=0;MQRankSum=-2.086;QD=89.58;ReadPosRankSum=-0.213;VQSLOD=1.7781;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/1:11,0:10:35.46:1492,0,35	0/1:4,1:5:24.13:554,0,24	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	1/1:6,0:6:12.13:533,12,0	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.
chr10	32800271	.	T	TG	27268.30	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=4.766;DP=679;FS=0.989;HRun=0;HaplotypeScore=122.9567;InbreedingCoeff=0.9959;MQ=86.25;MQ0=0;MQRankSum=-7.367;QD=44.78;ReadPosRankSum=4.237;VQSLOD=4.0960;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,47:47:99:2253,141,0	1/1:0,9:9:24.08:384,24,0	0/0:21,0:21:59.76:0,60,748	0/0:23,0:23:63.05:0,63,792	1/1:1,27:28:78.27:1246,78,0	1/1:0,18:18:51.17:815,51,0	1/1:0,24:24:66.23:1055,66,0	1/1:0,32:32:96.29:1463,96,0	1/1:2,28:30:78.27:1246,78,0	1/1:0,10:10:27.09:432,27,0	1/1:1,13:14:30.10:480,30,0	1/1:2,35:37:99:1583,99,0	1/1:1,18:20:57.19:904,57,0	1/1:0,33:33:99:1581,99,0	0/0:26,0:26:78.26:0,78,1091	1/1:0,23:23:66.23:1055,66,0	1/1:1,34:35:93.32:1487,93,0	1/1:0,17:17:51.17:815,51,0	1/1:0,15:15:45.15:720,45,0	1/1:0,30:30:87.30:1391,87,0	1/1:0,35:35:93.32:1487,93,0	1/1:0,25:25:75.26:1193,75,0	1/1:0,20:20:60.20:959,60,0	1/1:0,30:30:84.29:1343,84,0	1/1:0,20:20:51.17:815,51,0	1/1:1,25:26:75.26:1195,75,0	1/1:1,23:23:69.21:1077,69,0	1/1:0,7:7:18.06:288,18,0
chr10	32801469	.	G	GA	8438.65	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-4.024;DP=548;FS=30.890;HRun=9;HaplotypeScore=85.7228;InbreedingCoeff=0.9255;MQ=73.66;MQ0=0;MQRankSum=-2.839;QD=17.65;ReadPosRankSum=-1.664;VQSLOD=3.0147;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:40.40:0,40,332	1/1:2,7:9:18.02:185,18,0	0/0:11,0:12:23.49:0,23,187	0/0:10,0:11:4.48:0,4,61	1/1:14,3:17:36.50:343,36,0	1/1:3,16:19:21.06:232,21,0	1/1:0,7:7:15.04:166,15,0	1/1:12,20:33:60.91:565,61,0	1/1:10,20:30:74.64:764,75,0	1/1:4,15:19:33.04:338,33,0	1/1:3,11:14:17.90:159,18,0	1/1:3,14:17:21.06:232,21,0	1/1:2,19:21:24.06:265,24,0	1/1:5,15:20:27.07:299,27,0	0/0:20,0:20:14.62:0,15,288	1/1:3,16:19:38.93:431,39,0	1/1:2,29:31:63.17:697,63,0	1/1:4,15:19:33.09:365,33,0	1/1:12,23:33:49:712,49,0	1/1:5,16:21:41.85:368,42,0	1/1:1,6:8:15.51:167,16,0	1/1:3,8:11:20.59:178,21,0	1/1:5,18:23:20.46:135,20,0	1/1:4,11:15:30.08:332,30,0	1/1:1,23:24:18.05:199,18,0	1/1:4,20:24:50.98:485,51,0	1/1:6,32:38:62.87:697,63,0	1/1:2,2:4:12.02:125,12,0
chr10	32801610	.	C	CT	4268.08	PASS	AB=0.735;AC=44;AF=0.786;AN=56;BaseQRankSum=-0.607;DP=412;FS=1.711;HRun=13;HaplotypeScore=54.4314;InbreedingCoeff=-0.0489;MQ=67.17;MQ0=4;MQRankSum=-1.580;QD=10.56;ReadPosRankSum=-0.165;VQSLOD=4.0869;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,12:17:21.45:336,21,0	0/1:4,2:7:25.56:47,0,26	1/1:11,0:9:2.92:17,3,0	0/1:7,0:7:4.07:4,0,15	0/1:8,6:14:2.56:121,0,3	0/1:6,3:9:8.57:72,0,9	1/1:2,1:2:3:28,3,0	0/1:17,8:25:38.35:190,0,38	1/1:6,11:17:13.14:211,13,0	0/1:10,8:17:14.19:156,0,14	1/1:7,11:18:3.50:174,3,0	1/1:3,7:9:11.98:104,12,0	1/1:10,5:14:14.93:123,15,0	1/1:2,5:7:15.01:135,15,0	0/0:8,0:8:8.91:0,9,62	0/1:5,7:13:2.73:107,0,3	1/1:12,7:19:29.25:276,29,0	1/1:6,17:22:30.50:275,30,0	1/1:7,11:19:21.30:322,21,0	1/1:5,9:14:21.29:174,21,0	0/1:6,6:12:26.14:69,0,26	0/1:13,7:21:41.94:112,0,42	1/1:7,12:19:9.16:192,9,0	0/1:10,5:15:19.62:96,0,20	1/1:4,16:21:30.03:279,30,0	1/1:5,8:13:26.98:237,27,0	1/1:9,13:23:29.77:264,30,0	1/1:4,5:9:17.82:146,18,0
chr10	32802226	.	ATTCTTGTT	A	138.32	PASS	AB=0.727;AC=7;AF=0.194;AN=36;BaseQRankSum=-0.421;DP=201;FS=13.622;HRun=0;HaplotypeScore=59.1825;InbreedingCoeff=0.3793;MQ=60.19;MQ0=26;MQRankSum=-2.105;QD=6.59;ReadPosRankSum=-0.754;VQSLOD=0.1544;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:1,0:1:3.01:0,3,65	./.	0/0:23,0:14:42.11:0,42,1316	0/0:24,0:14:36.12:0,36,1107	./.	0/0:6,2:8:12.04:0,12,240	./.	./.	0/0:6,0:6:15.05:0,15,298	0/1:5,3:7:63.49:63,0,260	0/0:3,5:7:9.03:0,9,180	./.	./.	0/0:5,0:5:12.04:0,12,247	0/0:40,0:40:72.15:0,72,2613	0/0:3,3:4:3.01:0,3,59	./.	./.	0/0:11,0:1:3.01:0,3,59	0/0:4,2:5:12.04:0,12,243	0/0:2,0:2:6.02:0,6,122	./.	1/1:0,5:5:2.94:18,3,0	./.	1/1:0,4:2:3.01:81,3,0	1/1:0,4:4:3.01:81,3,0	0/0:3,1:3:6.02:0,6,121	0/0:4,0:4:12.04:0,12,208
chr10	32802234	.	T	TC	1323.89	PASS	AB=0.722;AC=23;AF=0.639;AN=36;BaseQRankSum=4.888;DP=219;FS=2.725;HRun=0;HaplotypeScore=40.7707;InbreedingCoeff=0.5503;MQ=57.87;MQ0=21;MQRankSum=-4.896;QD=15.95;ReadPosRankSum=7.125;VQSLOD=4.9428;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,1:1:3.01:38,3,0	./.	0/0:25,0:14:42.10:0,42,517	0/0:25,0:15:39.07:0,39,485	./.	1/1:3,6:8:12.04:163,12,0	./.	./.	1/1:0,6:6:15.05:208,15,0	0/1:8,5:12:42.98:184,0,43	1/1:5,3:7:9.03:127,9,0	./.	./.	1/1:1,5:5:12.04:163,12,0	0/0:37,2:38:34.96:0,35,905	1/1:3,3:4:3.01:42,3,0	./.	./.	1/1:6,1:1:3.01:42,3,0	1/1:8,4:8:12.04:167,12,0	1/1:0,2:2:6.02:82,6,0	./.	0/0:6,0:6:2.97:0,3,20	./.	0/0:4,0:2:2.22:0,2,7	0/0:5,0:5:2.22:0,2,7	1/1:2,3:3:6.02:84,6,0	1/1:3,4:7:12.04:164,12,0
chr10	32809152	.	TA	T	12827.86	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=6.655;DP=587;FS=6.480;HRun=9;HaplotypeScore=105.8761;InbreedingCoeff=0.9733;MQ=75.69;MQ0=0;MQRankSum=-4.164;QD=23.84;ReadPosRankSum=2.429;VQSLOD=4.8392;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,27:28:81.04:741,81,0	1/1:0,7:7:21.01:192,21,0	0/0:13,0:13:17.99:0,18,184	0/0:10,0:10:21.05:0,21,234	1/1:1,27:28:75.03:685,75,0	1/1:2,31:33:90.05:823,90,0	1/1:5,14:19:36.01:329,36,0	1/1:3,16:19:48:433,48,0	1/1:1,14:15:39.02:357,39,0	1/1:1,16:17:48.03:439,48,0	1/1:4,26:30:80.92:722,81,0	1/1:1,29:30:81.04:741,81,0	1/1:3,15:18:36.02:329,36,0	1/1:1,14:15:39.02:357,39,0	0/0:26,0:25:69.20:0,69,796	1/1:3,18:21:54.02:494,54,0	1/1:1,16:17:48.03:439,48,0	1/1:2,10:12:30.01:274,30,0	1/1:2,18:20:54.03:494,54,0	1/1:2,35:37:99:953,105,0	1/1:2,14:16:39.01:357,39,0	1/1:3,23:26:66.03:604,66,0	1/1:1,30:31:84.04:769,84,0	1/1:1,16:17:45.02:412,45,0	1/1:3,21:24:63.03:576,63,0	1/1:3,22:25:65.99:593,66,0	1/1:3,27:30:68.92:631,69,0	1/1:0,3:3:9:82,9,0
chr10	32810403	.	T	TG	5044.87	PASS	AB=0.944;AC=48;AF=0.857;AN=56;BaseQRankSum=-0.206;DP=606;FS=110.177;HRun=1;HaplotypeScore=90.8402;InbreedingCoeff=0.6334;MQ=61.13;MQ0=11;MQRankSum=2.873;QD=9.76;ReadPosRankSum=-0.473;VQSLOD=1.4553;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:43,0:43:90.28:657,90,0	1/1:13,0:13:4.47:87,4,0	0/0:28,0:10:8.73:0,9,77	0/0:32,0:10:8.10:0,8,76	1/1:23,0:22:34.82:159,35,0	1/1:24,0:24:19.24:126,19,0	1/1:16,0:16:29.22:172,29,0	1/1:31,0:29:6.63:240,7,0	1/1:22,1:23:37.04:219,37,0	1/1:29,0:28:52.50:374,52,0	1/1:28,0:28:32.44:171,32,0	1/1:18,0:18:38.78:266,39,0	1/1:16,0:16:14.48:79,14,0	1/1:13,0:13:22.09:144,22,0	0/0:25,0:25:75.16:0,75,869	1/1:12,1:13:14.68:111,15,0	1/1:19,0:19:29.80:194,30,0	1/1:8,1:8:15.06:106,15,0	1/1:22,0:23:35.09:226,35,0	1/1:22,0:22:17.42:197,17,0	1/1:9,1:10:19.50:125,20,0	1/1:26,0:26:40.91:241,41,0	1/1:23,1:24:27.03:207,27,0	1/1:10,0:10:12.58:92,13,0	1/1:28,1:29:60.70:430,61,0	0/1:20,0:20:12.37:132,0,12	1/1:27,0:27:38.89:230,39,0	0/1:7,1:8:3.18:59,0,3
chr10	32810404	.	GT	G	370.99	PASS	AB=0.928;AC=5;AF=0.089;AN=56;BaseQRankSum=4.017;DP=601;FS=6.102;HRun=13;HaplotypeScore=105.7862;InbreedingCoeff=0.3967;MQ=61.91;MQ0=11;MQRankSum=0.078;QD=3.37;ReadPosRankSum=-0.934;VQSLOD=1.0000;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:15,25:42:41.53:459,42,0	0/0:13,0:13:18.44:0,18,166	0/0:28,1:11:13.73:0,14,118	0/1:34,0:9:0.37:0,0,25	0/0:22,1:22:33.39:0,33,308	0/0:21,1:22:34.31:0,34,327	0/1:14,2:16:10.90:11,0,138	0/0:29,1:28:30.94:0,31,304	0/0:22,1:23:28.20:0,28,276	0/0:29,0:28:41.05:0,41,260	0/0:26,1:27:41.34:0,41,380	0/1:15,2:17:11.20:11,0,141	0/0:16,0:16:41.47:0,41,278	0/0:13,0:13:23.69:0,24,158	0/0:24,1:25:50.20:0,50,644	0/0:11,0:11:26.62:0,27,177	0/0:18,1:19:19.04:0,19,216	0/0:9,0:8:20.65:0,21,134	0/0:22,1:23:31.20:0,31,299	0/0:22,0:22:16.31:0,16,225	0/0:11,0:11:24.01:0,24,148	0/0:26,0:26:64.20:0,64,408	0/0:24,0:24:56.16:0,56,377	0/0:10,0:10:23.65:0,24,157	0/0:30,0:30:54.86:0,55,352	0/0:19,0:19:38.28:0,38,258	0/0:27,0:27:59.24:0,59,396	0/0:8,0:8:23.71:0,24,169
chr10	32812214	.	CATATATAT	C	3742.39	PASS	AC=38;AF=0.864;AN=44;BaseQRankSum=2.872;DP=143;FS=0.000;HRun=0;HaplotypeScore=77.8112;InbreedingCoeff=0.3536;MQ=71.66;MQ0=1;MQRankSum=-1.657;QD=34.02;ReadPosRankSum=1.936;VQSLOD=3.1115;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:6:7.84:32,8,0	1/1:0,1:1:3.01:70,3,0	0/0:12,0:6:0.26:0,0,30	0/0:17,0:9:1.89:0,2,4	1/1:2,8:11:21.07:428,21,0	1/1:1,6:7:17.98:316,18,0	./.	1/1:17,2:19:6.02:135,6,0	./.	1/1:1,2:3:9.03:196,9,0	1/1:0,3:4:12.04:225,12,0	1/1:0,1:1:3.01:69,3,0	1/1:2,2:4:6.02:138,6,0	1/1:1,5:6:15.05:344,15,0	0/0:1,0:1:3.01:0,3,126	1/1:0,3:3:9.03:206,9,0	1/1:3,2:5:6.02:139,6,0	./.	1/1:4,3:7:9.03:211,9,0	1/1:0,2:2:6.02:138,6,0	./.	1/1:0,1:1:3.01:68,3,0	./.	./.	1/1:2,4:6:12.04:278,12,0	1/1:2,6:8:20.32:226,20,0	1/1:2,6:9:24.08:457,24,0	1/1:6,1:6:3.01:70,3,0
chr10	32814182	.	C	CATAA	1316.39	PASS	AC=10;AF=0.227;AN=44;BaseQRankSum=-6.058;DP=193;FS=0.991;HRun=0;HaplotypeScore=28.4911;InbreedingCoeff=0.6380;MQ=65.34;MQ0=0;MQRankSum=0.637;QD=27.42;ReadPosRankSum=0.174;VQSLOD=2.9554;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:6:12.02:0,12,162	0/0:4,0:4:9.03:0,9,139	./.	0/0:6,0:3:0:0,0,0	1/1:3,3:6:9:162,9,0	1/1:3,8:13:15.05:353,15,0	./.	0/0:27,0:26:18.04:0,18,220	./.	0/0:5,0:5:6.02:0,6,93	0/0:7,0:7:3.01:0,3,46	0/0:6,0:6:6.02:0,6,93	0/0:7,0:7:6.02:0,6,93	./.	0/0:4,0:6:6.01:0,6,56	1/1:4,0:4:3:27,3,0	1/1:6,12:18:27.09:635,27,0	./.	0/0:8,0:8:9.03:0,9,139	./.	0/0:2,0:2:6.02:0,6,93	0/0:2,0:2:6.02:0,6,93	0/0:5,0:5:6.02:0,6,93	0/0:6,0:6:9.03:0,9,139	1/1:3,4:7:12.04:282,12,0	0/0:7,0:7:6.02:0,6,93	0/0:13,0:13:21.06:0,21,304	0/0:9,0:8:11.95:0,12,112
chr10	32816329	.	C	CA	21184.21	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-10.467;DP=608;FS=0.507;HRun=2;HaplotypeScore=49.5740;InbreedingCoeff=0.9788;MQ=88.22;MQ0=0;MQRankSum=-8.328;QD=38.80;ReadPosRankSum=4.519;VQSLOD=4.9582;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,23:23:69.23:993,69,0	1/1:0,14:14:42.14:605,42,0	0/0:18,0:18:53.65:0,54,624	0/0:26,0:26:72.19:0,72,862	1/1:1,30:31:93.05:1241,93,0	1/1:1,36:37:99:1469,102,0	1/1:0,19:19:45.15:648,45,0	1/1:3,34:37:99:1408,99,0	1/1:0,16:16:45.15:648,45,0	1/1:2,35:37:99:1434,105,0	1/1:0,32:32:87.25:1230,87,0	1/1:1,16:17:45.15:648,45,0	1/1:1,22:23:63.21:907,63,0	1/1:1,16:17:48.12:668,48,0	0/0:18,0:18:48.14:0,48,582	1/1:4,16:19:48.16:691,48,0	1/1:1,11:12:30.10:432,30,0	1/1:1,10:11:27.09:389,27,0	1/1:0,17:17:51.14:693,51,0	1/1:0,29:29:81.27:1166,81,0	1/1:0,18:18:48.16:691,48,0	1/1:1,17:18:51.13:711,51,0	1/1:0,20:20:57.19:821,57,0	1/1:0,19:19:51.17:734,51,0	1/1:3,10:13:30.10:432,30,0	1/1:0,27:27:81.25:1143,81,0	1/1:2,34:36:87.29:1253,87,0	1/1:0,3:3:9.03:130,9,0
chr10	32817780	.	G	GAAAAA	23071.59	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-5.180;DP=569;FS=0.561;HRun=9;HaplotypeScore=110.0667;InbreedingCoeff=0.9597;MQ=65.75;MQ0=1;MQRankSum=-8.734;QD=45.69;ReadPosRankSum=0.708;VQSLOD=3.3638;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,8:18:13.05:784,13,0	1/1:1,4:5:12.04:340,12,0	0/0:20,0:19:42.05:0,42,661	0/0:20,0:21:49:0,49,765	1/1:11,15:30:54.98:1165,55,0	1/1:4,17:23:57.20:1525,57,0	1/1:4,6:10:15.05:374,15,0	1/1:25,10:39:75.26:1730,75,0	1/1:4,5:13:27.09:626,27,0	1/1:9,9:23:51.16:1116,51,0	1/1:13,10:27:45.14:917,45,0	1/1:3,8:15:32.86:810,33,0	1/1:3,14:18:39.13:1068,39,0	1/1:7,11:18:27.09:765,27,0	0/0:23,0:23:57.13:0,57,918	1/1:4,8:15:27.09:695,27,0	1/1:7,5:15:21.07:504,21,0	1/1:3,9:12:27.09:764,27,0	1/1:16,11:29:48.15:1061,48,0	1/1:10,18:32:69.24:1704,69,0	1/1:3,11:18:27.09:642,27,0	1/1:3,5:8:15.01:360,15,0	1/1:11,10:23:30.10:703,30,0	1/1:6,3:14:14.98:358,15,0	1/1:7,8:17:27.09:695,27,0	1/1:9,21:34:90.31:2108,90,0	1/1:12,21:34:60.21:1661,60,0	1/1:7,5:14:24.08:597,24,0
chr10	32818084	.	CACCAGAGA	C	26834.82	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=10.935;DP=664;FS=0.930;HRun=0;HaplotypeScore=173.3529;InbreedingCoeff=0.9556;MQ=56.28;MQ0=7;MQRankSum=-13.448;QD=48.26;ReadPosRankSum=4.052;VQSLOD=4.4144;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,42:50:69.24:1802,69,0	1/1:0,8:7:18.06:487,18,0	0/0:43,0:34:87.74:0,88,3181	0/0:30,0:23:49.18:0,49,2192	1/1:6,23:28:36.12:950,36,0	1/1:1,19:20:36.12:951,36,0	1/1:4,15:19:24.08:605,24,0	1/1:12,17:29:51.17:1291,51,0	1/1:2,37:39:99:2845,105,0	1/1:4,21:25:60.19:1566,60,0	1/1:5,10:14:15.05:362,15,0	1/1:2,24:25:66.23:1764,66,0	1/1:0,27:27:60.16:1565,60,0	1/1:3,30:33:66.23:1788,66,0	0/0:35,0:35:99:0,105,4159	1/1:4,21:25:45.12:1220,45,0	1/1:1,16:17:30.10:813,30,0	1/1:2,7:9:12.04:325,12,0	1/1:9,10:19:30.10:694,30,0	1/1:4,18:22:48.16:1257,48,0	1/1:8,24:32:45.15:1145,45,0	1/1:3,10:13:21.07:524,21,0	1/1:3,10:12:30.10:810,30,0	1/1:8,11:18:18.06:443,18,0	1/1:3,13:15:39.13:1057,39,0	1/1:3,19:22:54.16:1350,54,0	1/1:4,22:26:36.12:976,36,0	1/1:0,3:3:9.03:244,9,0
chr10	32818397	.	GA	G	10609.90	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-1.409;DP=522;FS=11.404;HRun=9;HaplotypeScore=55.5394;InbreedingCoeff=0.9765;MQ=62.93;MQ0=0;MQRankSum=-0.480;QD=22.01;ReadPosRankSum=1.588;VQSLOD=5.0919;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,32:37:96.04:879,96,0	1/1:1,11:12:27.01:247,27,0	0/0:14,0:8:15.04:0,15,168	0/0:10,1:10:23.35:0,23,227	1/1:2,26:28:72.03:659,72,0	1/1:5,19:24:48.02:439,48,0	1/1:0,6:6:12:110,12,0	1/1:6,19:25:40.52:496,41,0	1/1:1,14:15:42.02:384,42,0	1/1:5,18:23:54.01:488,54,0	1/1:0,21:21:57.03:522,57,0	1/1:4,12:16:27:247,27,0	1/1:2,15:17:41.72:384,42,0	1/1:2,14:16:42.02:384,42,0	0/0:15,0:15:36.09:0,36,405	1/1:3,10:13:30.01:275,30,0	1/1:4,18:22:19.75:425,20,0	1/1:1,8:9:21.01:192,21,0	1/1:2,26:28:78.02:710,78,0	1/1:2,22:24:57.01:522,57,0	1/1:2,12:14:33.02:302,33,0	1/1:1,12:12:36.02:329,36,0	1/1:5,22:27:60.02:549,60,0	1/1:1,14:15:36.02:330,36,0	1/1:2,18:20:51.03:467,51,0	1/1:5,24:30:74.07:665,74,0	1/1:2,18:20:45.02:412,45,0	1/1:0,7:7:21.01:192,21,0
chr10	32818697	.	T	TC	22292.62	PASS	AB=0.536;AC=49;AF=0.875;AN=56;BaseQRankSum=-10.334;DP=567;FS=3.196;HRun=0;HaplotypeScore=52.6082;InbreedingCoeff=0.8390;MQ=73.74;MQ0=2;MQRankSum=-5.745;QD=43.54;ReadPosRankSum=4.970;VQSLOD=5.0095;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,22:23:32.59:970,33,0	1/1:0,7:7:15.05:240,15,0	0/0:19,0:17:51.14:0,51,668	0/0:19,0:18:52.68:0,53,623	1/1:2,24:26:54.32:1036,54,0	1/1:0,21:21:57.19:911,57,0	1/1:0,12:12:30.10:478,30,0	1/1:0,35:34:99:1675,105,0	1/1:0,20:20:60.20:958,60,0	1/1:4,32:36:99:1599,102,0	1/1:1,24:25:69.24:1102,69,0	1/1:0,11:11:27.09:431,27,0	1/1:0,14:14:39.13:622,39,0	1/1:1,15:16:45.15:718,45,0	0/0:17,0:17:51.17:0,51,712	1/1:0,22:22:60.20:958,60,0	1/1:0,24:24:66.22:1049,66,0	1/1:1,14:15:42.14:670,42,0	1/1:1,24:25:69.24:1101,69,0	1/1:1,31:32:87.30:1389,87,0	1/1:0,21:21:60.20:958,60,0	1/1:0,14:14:39.13:623,39,0	1/1:1,21:22:57.12:910,57,0	1/1:0,14:14:39.13:617,39,0	1/1:0,13:13:36.12:575,36,0	1/1:0,29:29:84.27:1319,84,0	1/1:0,19:20:51.17:806,51,0	0/1:2,13:15:12.75:578,0,13
chr10	32820172	.	TA	T	9633.21	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=4.146;DP=501;FS=4.759;HRun=10;HaplotypeScore=95.8871;InbreedingCoeff=0.9109;MQ=53.52;MQ0=3;MQRankSum=-5.648;QD=21.45;ReadPosRankSum=1.289;VQSLOD=5.3393;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,10:16:26.95:229,27,0	1/1:2,11:13:3.89:254,4,0	0/0:15,1:10:21.51:0,22,218	0/0:14,0:9:11.80:0,12,133	1/1:5,21:26:56.96:494,57,0	1/1:1,26:27:77.98:677,78,0	1/1:3,8:11:23.99:208,24,0	1/1:9,17:26:56.97:492,57,0	1/1:1,15:16:44.99:390,45,0	1/1:3,20:23:56.98:495,57,0	1/1:6,17:23:59.93:512,60,0	1/1:3,13:16:38.99:338,39,0	1/1:0,15:15:44.99:390,45,0	1/1:4,21:25:62.97:544,63,0	0/0:21,0:22:47.96:0,48,508	1/1:2,14:16:41.99:365,42,0	1/1:3,14:16:38.98:338,39,0	1/1:3,7:10:20.99:182,21,0	1/1:3,9:11:32.98:283,33,0	1/1:7,24:31:80.70:675,81,0	1/1:1,3:4:9:78,9,0	1/1:3,12:15:38.97:335,39,0	1/1:5,20:25:61.79:525,62,0	1/1:4,6:10:17.95:149,18,0	1/1:4,11:15:34.08:328,34,0	1/1:1,16:17:47.99:417,48,0	1/1:5,25:30:77.96:673,78,0	1/1:0,10:10:29.99:260,30,0
chr10	32820192	.	CT	C	10584.42	PASS	AB=1.000;AC=51;AF=0.911;AN=56;BaseQRankSum=3.312;DP=496;FS=14.796;HRun=8;HaplotypeScore=99.0186;InbreedingCoeff=0.7683;MQ=54.08;MQ0=1;MQRankSum=-6.168;QD=22.71;ReadPosRankSum=2.492;VQSLOD=3.9111;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,13:17:30.04:290,30,0	1/1:3,14:17:39.06:377,39,0	0/1:15,0:10:8.62:9,0,117	0/0:9,0:7:11.87:0,12,126	1/1:2,22:24:63.10:608,63,0	1/1:3,21:24:63.10:608,63,0	1/1:4,4:8:15:139,15,0	1/1:5,22:27:69.09:662,69,0	1/1:1,19:20:54.07:515,54,0	1/1:2,21:23:60.09:579,60,0	1/1:5,15:21:47.10:440,47,0	1/1:5,9:14:27.04:261,27,0	1/1:1,16:17:42.07:405,42,0	1/1:3,20:23:60.09:579,60,0	0/0:21,0:21:57.17:0,57,689	1/1:0,14:14:39.06:376,39,0	1/1:7,17:23:26.86:387,27,0	1/1:0,8:8:24.04:232,24,0	1/1:4,12:16:36.05:348,36,0	1/1:6,21:28:62.11:580,62,0	1/1:1,4:5:9.01:87,9,0	1/1:1,13:14:36.06:347,36,0	1/1:3,25:28:75.12:724,75,0	1/1:0,10:11:26.07:238,26,0	1/1:1,11:12:30.05:290,30,0	1/1:0,21:21:63.10:608,63,0	1/1:3,20:23:60.09:579,60,0	1/1:1,11:12:33.05:319,33,0
chr10	32820576	.	C	CA	10003.84	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-7.671;DP=455;FS=0.000;HRun=8;HaplotypeScore=47.5296;InbreedingCoeff=0.8665;MQ=62.91;MQ0=4;MQRankSum=-1.493;QD=25.33;ReadPosRankSum=1.861;VQSLOD=5.3244;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,10:17:30.09:346,30,0	1/1:0,3:3:6.02:69,6,0	0/0:22,0:15:24.02:0,24,276	0/0:21,0:14:24.87:0,25,214	1/1:2,11:14:35.86:366,36,0	1/1:3,20:24:29.54:576,30,0	1/1:0,11:11:27.08:312,27,0	1/1:5,16:20:44.98:485,45,0	1/1:1,10:11:24.07:277,24,0	1/1:2,14:16:42.11:473,42,0	1/1:3,15:17:42.08:470,42,0	1/1:0,6:6:9.03:104,9,0	1/1:2,15:17:39.12:450,39,0	1/1:2,14:16:36.07:401,36,0	0/0:17,0:17:45.02:0,45,412	1/1:1,6:7:18.05:208,18,0	1/1:9,22:32:52.04:650,52,0	1/1:6,18:25:40.85:512,41,0	1/1:2,9:11:2.61:272,3,0	1/1:0,15:15:42.12:484,42,0	1/1:2,9:11:10.65:229,11,0	1/1:1,11:12:30.05:331,30,0	1/1:4,14:18:36.11:415,36,0	1/1:0,11:11:21.06:242,21,0	1/1:3,18:21:26.70:561,27,0	1/1:0,25:25:75.22:866,75,0	1/1:1,8:9:21.06:242,21,0	1/1:1,22:23:36.14:663,36,0
chr10	32821925	.	G	GA	16768.59	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-10.389;DP=588;FS=1.104;HRun=6;HaplotypeScore=47.7500;InbreedingCoeff=0.9977;MQ=61.80;MQ0=3;MQRankSum=1.989;QD=32.88;ReadPosRankSum=3.843;VQSLOD=4.8139;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,20:22:51.09:607,51,0	1/1:0,12:12:36.12:453,36,0	0/0:31,0:20:51.11:0,51,520	0/0:23,0:20:51.01:0,51,490	1/1:3,29:32:84.27:1055,84,0	1/1:7,20:27:57.18:717,57,0	1/1:1,9:10:24.08:302,24,0	1/1:4,28:32:84.26:1044,84,0	1/1:1,20:21:51.16:642,51,0	1/1:4,17:21:54.17:678,54,0	1/1:4,23:27:69.22:868,69,0	1/1:0,17:17:51.16:642,51,0	1/1:3,13:16:36.12:453,36,0	1/1:0,14:14:39.12:491,39,0	0/0:24,0:24:66.15:0,66,673	1/1:1,17:18:51.16:642,51,0	1/1:0,20:20:57.18:717,57,0	1/1:0,15:15:45.14:566,45,0	1/1:3,18:19:54.16:665,54,0	1/1:1,34:35:96.26:1189,96,0	1/1:2,15:17:42.13:528,42,0	1/1:1,16:17:45.10:548,45,0	1/1:2,19:21:57.18:717,57,0	1/1:0,14:14:42.13:528,42,0	1/1:1,25:26:72.23:906,72,0	1/1:2,19:21:57.18:717,57,0	1/1:1,23:23:66.21:830,66,0	1/1:1,9:10:21.07:264,21,0
chr10	32823985	.	T	TA	13051.66	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-7.633;DP=495;FS=12.560;HRun=8;HaplotypeScore=46.5626;InbreedingCoeff=0.9493;MQ=67.67;MQ0=1;MQRankSum=-3.505;QD=28.81;ReadPosRankSum=2.497;VQSLOD=4.3535;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,26:28:78.23:900,78,0	1/1:0,5:5:15.04:173,15,0	0/0:13,0:11:29.80:0,30,255	0/0:11,0:9:14.91:0,15,159	1/1:4,35:39:96.76:1109,97,0	1/1:2,17:19:48.09:538,48,0	1/1:1,3:4:6.02:69,6,0	1/1:4,21:24:60.07:642,60,0	1/1:1,15:16:39.12:450,39,0	1/1:1,23:24:66.18:749,66,0	1/1:1,19:20:57.13:643,57,0	1/1:1,7:8:21.06:242,21,0	1/1:0,14:14:39.12:450,39,0	1/1:7,10:17:21.06:242,21,0	0/0:18,0:18:41.99:0,42,375	1/1:1,11:12:33.10:381,33,0	1/1:2,18:19:51.15:589,51,0	1/1:4,12:16:35.64:415,36,0	1/1:6,13:19:48.08:520,48,0	1/1:1,16:17:48.14:553,48,0	1/1:2,12:14:33.10:381,33,0	1/1:3,14:17:36.11:416,36,0	1/1:2,15:17:39.12:450,39,0	1/1:1,15:16:45.13:519,45,0	1/1:2,24:26:63.19:727,63,0	1/1:2,22:24:63.17:715,63,0	1/1:1,21:22:60.18:692,60,0	1/1:0,14:14:42.12:485,42,0
chr10	32825428	.	CAGAT	C	21988.01	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=0.501;DP=528;FS=0.000;HRun=0;HaplotypeScore=102.6749;InbreedingCoeff=0.9863;MQ=61.49;MQ0=0;MQRankSum=-4.549;QD=45.43;ReadPosRankSum=4.599;VQSLOD=5.1288;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,15:17:45.15:853,45,0	1/1:1,5:6:12.04:228,12,0	0/0:14,0:13:34.74:0,35,832	0/0:17,0:17:42.12:0,42,1039	1/1:0,27:27:75.25:1321,75,0	1/1:1,21:22:45.15:835,45,0	1/1:1,16:17:33.11:598,33,0	1/1:6,34:39:99:1654,99,0	1/1:1,16:17:45.05:810,45,0	1/1:1,28:29:84.29:1561,84,0	1/1:0,25:25:69.24:1288,69,0	1/1:0,11:11:30.10:550,30,0	1/1:0,18:18:30.10:569,30,0	1/1:0,9:9:27.09:507,27,0	0/0:13,0:13:39.13:0,39,1053	1/1:0,14:14:30.10:569,30,0	1/1:1,19:20:48.16:890,48,0	1/1:3,13:16:36.12:683,36,0	1/1:1,19:20:57.19:1025,57,0	1/1:3,21:24:57.12:967,57,0	1/1:0,13:13:33.11:587,33,0	1/1:3,16:19:48.16:870,48,0	1/1:0,20:20:51.17:968,51,0	1/1:1,15:16:30.10:569,30,0	1/1:2,20:22:60.21:1138,60,0	1/1:0,19:19:57.20:1071,57,0	1/1:7,29:35:81.28:1497,81,0	1/1:0,7:7:21.07:380,21,0
chr10	32825534	.	TA	T	9995.04	PASS	AB=0.640;AC=49;AF=0.875;AN=56;BaseQRankSum=1.487;DP=439;FS=9.316;HRun=8;HaplotypeScore=47.7232;InbreedingCoeff=0.7851;MQ=57.90;MQ0=0;MQRankSum=-0.211;QD=24.20;ReadPosRankSum=2.999;VQSLOD=5.2016;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,16:17:39.05:376,39,0	1/1:1,7:8:12.02:116,12,0	0/0:10,0:10:27.08:0,27,320	0/0:7,0:6:18.05:0,18,205	1/1:2,19:21:57.09:550,57,0	1/1:5,23:28:57.08:550,57,0	1/1:2,12:14:27.04:261,27,0	1/1:2,24:26:69.09:661,69,0	1/1:1,11:12:33.05:319,33,0	1/1:1,18:19:54.07:516,54,0	1/1:1,23:24:66.10:637,66,0	1/1:0,9:9:27.04:261,27,0	1/1:0,14:14:39.06:377,39,0	1/1:2,10:12:27.03:261,27,0	0/0:9,0:9:27.07:0,27,314	1/1:1,11:12:27.04:261,27,0	0/1:7,9:16:30.82:224,0,31	1/1:3,6:9:4.74:157,5,0	1/1:2,20:22:57.06:538,57,0	1/1:0,24:24:66.10:637,66,0	1/1:0,7:7:18.03:174,18,0	1/1:1,14:15:42.07:406,42,0	1/1:0,21:21:60.01:578,60,0	1/1:0,6:6:18.03:174,18,0	1/1:0,20:20:51.08:493,51,0	1/1:1,20:21:60.08:573,60,0	1/1:0,21:21:54.09:521,54,0	1/1:0,15:15:39.06:376,39,0
chr10	32825730	.	C	CCA	8123.72	PASS	AB=0.600;AC=49;AF=0.875;AN=56;BaseQRankSum=-1.152;DP=373;FS=16.276;HRun=0;HaplotypeScore=66.3052;InbreedingCoeff=0.6052;MQ=65.03;MQ0=3;MQRankSum=0.260;QD=24.32;ReadPosRankSum=0.451;VQSLOD=4.3573;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,10:12:1.47:156,1,0	0/1:2,4:6:12.88:65,0,13	0/0:16,0:7:4.25:0,4,69	0/0:14,0:11:8.69:0,9,114	1/1:0,18:18:42.73:528,43,0	1/1:2,15:18:8.25:431,8,0	1/1:0,7:8:17.42:284,17,0	1/1:0,15:17:37.97:382,38,0	1/1:0,17:18:45.15:801,45,0	1/1:0,11:11:32.21:333,32,0	1/1:0,12:14:25.58:335,26,0	1/1:2,0:2:5.96:44,6,0	1/1:2,15:19:26.09:394,26,0	1/1:2,7:12:16.72:201,17,0	0/0:9,0:9:24.07:0,24,340	1/1:0,11:13:20.43:342,20,0	1/1:4,3:16:16.82:192,17,0	1/1:4,0:4:6.02:101,6,0	1/1:3,19:26:29.18:556,29,0	1/1:1,16:18:34.67:366,35,0	1/1:1,10:12:10.24:322,10,0	1/1:0,7:9:12.04:198,12,0	1/1:0,15:16:23.44:368,23,0	1/1:0,15:16:26.45:453,26,0	1/1:0,9:11:15.05:274,15,0	1/1:0,16:18:47.74:496,48,0	1/1:1,12:15:20.29:335,20,0	1/1:1,4:5:9.03:166,9,0
chr10	32826817	.	TC	T	18894.23	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=0.838;DP=544;FS=2.428;HRun=1;HaplotypeScore=66.7776;InbreedingCoeff=0.9874;MQ=71.50;MQ0=1;MQRankSum=-7.176;QD=38.88;ReadPosRankSum=5.013;VQSLOD=5.3729;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,25:25:69.19:943,69,0	1/1:0,8:8:21.07:294,21,0	0/0:23,0:23:69.22:0,69,1045	0/0:20,0:20:52.60:0,53,735	1/1:0,28:28:84.24:1153,84,0	1/1:0,18:18:48.16:671,48,0	1/1:0,5:5:12.04:168,12,0	1/1:0,31:31:90.30:1257,90,0	1/1:0,17:16:45.15:629,45,0	1/1:0,28:28:84.28:1175,84,0	1/1:0,30:30:84.24:1153,84,0	1/1:0,14:14:36.12:504,36,0	1/1:0,20:20:54.18:755,54,0	1/1:0,18:18:51.17:713,51,0	0/0:15,0:15:45.14:0,45,697	1/1:0,16:16:36.12:503,36,0	1/1:0,15:15:39.13:545,39,0	1/1:0,13:13:39.13:545,39,0	1/1:0,24:24:69.20:934,69,0	1/1:0,26:25:75.25:1049,75,0	1/1:0,13:13:33.11:462,33,0	1/1:0,22:22:66.22:923,66,0	1/1:0,24:24:69.23:965,69,0	1/1:0,13:13:33.11:461,33,0	1/1:0,18:18:48.16:671,48,0	1/1:0,17:17:51.11:657,51,0	1/1:0,22:22:63.21:881,63,0	1/1:0,21:21:63.21:881,63,0
chr10	32827273	.	G	GGAAAA	43837.05	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-8.698;DP=625;FS=8.473;HRun=0;HaplotypeScore=94.6723;InbreedingCoeff=0.9771;MQ=65.74;MQ0=0;MQRankSum=-10.145;QD=79.56;ReadPosRankSum=3.637;VQSLOD=7.1254;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,21:28:72.25:2207,72,0	1/1:1,13:14:42.14:1314,42,0	0/0:23,0:23:57.19:0,57,1226	0/0:28,0:28:34.31:0,34,1261	1/1:9,27:36:90.31:2686,90,0	1/1:3,18:21:60.21:1760,60,0	1/1:3,8:12:30.10:894,30,0	1/1:10,23:35:93.23:2576,93,0	1/1:6,18:25:69.24:2028,69,0	1/1:10,22:32:78.27:2389,78,0	1/1:5,19:25:63.22:1887,63,0	1/1:4,15:20:57.20:1702,57,0	1/1:4,20:25:66.23:2072,66,0	1/1:4,15:20:51.18:1600,51,0	0/0:23,0:23:69.21:0,69,1420	1/1:7,20:27:75.26:2312,75,0	1/1:0,13:13:39.13:1236,39,0	1/1:3,9:12:27.09:855,27,0	1/1:1,15:18:45.13:1227,45,0	1/1:4,33:38:99:3302,111,0	1/1:2,4:8:12.04:380,12,0	1/1:3,16:20:54.18:1657,54,0	1/1:1,21:26:69.24:2092,69,0	1/1:1,3:6:12.04:360,12,0	1/1:4,11:15:45.15:1280,45,0	1/1:5,27:33:99:3005,99,0	1/1:6,21:32:75.21:2255,75,0	1/1:1,8:9:24.08:761,24,0
chr10	32830224	.	G	GGT	3447.60	PASS	AB=0.794;AC=32;AF=0.615;AN=52;BaseQRankSum=-4.872;DP=628;FS=1.394;HRun=0;HaplotypeScore=91.6577;InbreedingCoeff=-0.2773;MQ=59.16;MQ0=32;MQRankSum=0.172;QD=6.81;ReadPosRankSum=0.419;VQSLOD=3.2786;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:17,10:29:5.12:57,0,5	1/1:5,5:10:8.77:127,9,0	./.	0/1:70,0:15:0:0,0,0	0/0:23,0:25:23.72:0,24,217	0/1:15,9:26:99:110,0,133	0/1:13,3:17:34.95:78,0,35	1/1:24,0:22:3.01:45,3,0	0/1:11,6:18:47.61:161,0,48	0/1:27,0:27:54.34:111,0,54	0/1:19,6:25:20.72:123,0,21	1/1:5,6:13:14.78:202,15,0	0/1:13,2:15:40.32:116,0,40	1/1:12,3:15:6.02:89,6,0	0/0:22,0:23:35.92:0,36,368	1/1:3,4:8:12.04:179,12,0	0/1:8,6:16:37.06:119,0,37	0/1:11,0:11:18.09:81,0,18	./.	0/1:14,12:27:5.73:298,0,6	1/1:18,6:22:9.03:135,9,0	0/1:4,7:12:8.85:243,0,9	1/1:8,5:14:2.84:45,3,0	0/1:10,6:17:41.62:134,0,42	0/1:11,0:11:35.61:36,0,83	1/1:15,15:31:18.45:526,18,0	0/1:17,8:26:11.73:229,0,12	0/1:9,8:16:13.55:204,0,14
chr10	32830549	.	G	GA	8948.32	PASS	AB=0.538;AC=47;AF=0.839;AN=56;BaseQRankSum=-7.163;DP=511;FS=1.625;HRun=10;HaplotypeScore=63.2882;InbreedingCoeff=0.7631;MQ=75.62;MQ0=0;MQRankSum=-3.374;QD=21.31;ReadPosRankSum=2.671;VQSLOD=5.9034;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:62.78:0,63,503	1/1:0,8:8:15.04:160,15,0	0/0:22,0:20:6.45:0,6,124	0/0:12,0:11:21.65:0,22,135	1/1:3,23:26:55.42:519,55,0	1/1:5,26:32:68.90:863,69,0	1/1:0,6:6:15.04:160,15,0	1/1:5,23:28:70.96:723,71,0	1/1:5,13:17:27.07:288,27,0	1/1:5,21:26:60.01:615,60,0	1/1:8,17:26:46.80:479,47,0	1/1:5,2:9:2.09:193,2,0	1/1:2,9:11:12.03:128,12,0	1/1:4,5:9:27.07:286,27,0	0/0:24,0:24:66.77:0,67,527	1/1:6,6:12:32.87:332,33,0	1/1:3,11:14:26.74:266,27,0	1/1:0,3:3:9.02:96,9,0	1/1:6,9:15:26.35:274,26,0	1/1:12,12:23:53.96:503,54,0	1/1:1,10:11:21.05:224,21,0	1/1:2,11:13:36.09:383,36,0	1/1:10,9:19:43.26:383,43,0	0/1:2,12:14:15.94:197,0,16	1/1:5,10:15:21.05:224,21,0	1/1:7,18:24:63.15:664,63,0	1/1:8,18:27:11.81:421,12,0	1/1:4,20:28:59.52:569,60,0
chr10	32830588	.	CT	C	467.68	PASS	AB=0.924;AC=11;AF=0.196;AN=56;BaseQRankSum=0.879;DP=543;FS=2.568;HRun=13;HaplotypeScore=85.0997;InbreedingCoeff=0.0206;MQ=72.89;MQ0=2;MQRankSum=-0.809;QD=2.85;ReadPosRankSum=0.779;VQSLOD=0.2543;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,26:31:64.66:465,65,0	0/1:7,1:8:6.89:7,0,102	0/1:29,2:18:20.57:21,0,176	0/0:18,0:12:16.64:0,17,123	0/0:41,1:42:82.37:0,82,905	0/0:25,2:27:32.16:0,32,486	0/1:5,0:5:6.02:6,0,50	0/0:26,0:26:16.58:0,17,337	0/1:16,2:18:1.73:2,0,300	0/0:33,1:34:52.93:0,53,653	0/0:16,1:17:11.06:0,11,242	0/1:4,0:4:9.45:9,0,44	0/0:15,1:17:27.04:0,27,262	0/1:6,1:7:3.47:3,0,128	0/0:20,0:20:50.96:0,51,463	0/1:9,2:11:34.24:34,0,126	0/0:16,0:16:10.87:0,11,230	0/0:10,0:10:21.01:0,21,197	0/0:16,1:18:16.97:0,17,305	0/0:28,1:28:47.13:0,47,599	0/0:13,0:13:21.02:0,21,199	0/1:16,2:18:33.42:33,0,234	0/0:17,0:17:38.79:0,39,340	0/0:11,0:11:18.02:0,18,171	0/0:10,0:11:20.84:0,21,177	0/1:30,1:30:27.99:28,0,410	0/0:23,1:27:12.22:0,12,356	0/0:24,0:24:22.53:0,23,326
chr10	32842677	.	A	AG	5382.54	PASS	AC=52;AF=0.963;AN=54;BaseQRankSum=-2.410;DP=296;FS=0.000;HRun=1;HaplotypeScore=13.7260;InbreedingCoeff=0.3725;MQ=45.63;MQ0=1;MQRankSum=-2.430;QD=18.56;ReadPosRankSum=1.070;VQSLOD=4.8109;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,17:12:30.10:449,30,0	1/1:2,7:4:12.04:180,12,0	0/0:4,0:2:5.23:0,5,37	./.	1/1:1,13:9:24.01:333,24,0	1/1:0,12:6:18.06:270,18,0	1/1:0,10:6:12.04:180,12,0	1/1:1,12:1:2.98:21,3,0	1/1:2,14:9:21.07:311,21,0	1/1:3,10:5:12.04:180,12,0	1/1:2,14:5:15.05:225,15,0	1/1:0,12:6:15.05:225,15,0	1/1:1,4:4:12.04:180,12,0	1/1:0,8:3:9.03:135,9,0	1/1:1,9:5:12.04:180,12,0	1/1:0,6:3:9.03:135,9,0	1/1:3,7:6:15.05:224,15,0	1/1:1,6:4:6.02:90,6,0	1/1:1,11:5:15.05:225,15,0	1/1:2,19:7:18.06:270,18,0	1/1:0,3:2:6.02:90,6,0	1/1:0,9:5:15.05:225,15,0	1/1:1,12:5:6.02:90,6,0	1/1:1,11:10:24.08:359,24,0	1/1:0,11:7:21.07:315,21,0	1/1:2,11:4:12.04:180,12,0	1/1:3,11:6:15.05:225,15,0	1/1:1,3:4:6.02:90,6,0
chr10	32843886	.	TTGATAAG	T	463.80	PASS	AB=0.821;AC=10;AF=0.714;AN=14;BaseQRankSum=2.133;DP=143;FS=2.363;HRun=0;HaplotypeScore=11.7413;MQ=21.05;MQ0=83;MQRankSum=-2.533;QD=10.08;ReadPosRankSum=0.133;VQSLOD=0.6902;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:11,3:7:87.01:87,0,161	./.	./.	./.	./.	./.	./.	./.	1/1:2,1:1:3.01:79,3,0	./.	./.	./.	0/1:7,1:3:73.04:73,0,115	./.	./.	./.	0/1:5,1:3:14.97:15,0,115	0/1:3,2:3:73.08:73,0,75	1/1:3,4:2:6.02:140,6,0	./.	./.	./.	./.	./.	./.	1/1:1,2:2:3.01:79,3,0	./.	./.
chr10	32850279	.	CA	C	14854.85	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=1.813;DP=613;FS=1.089;HRun=5;HaplotypeScore=141.0758;InbreedingCoeff=0.9965;MQ=79.10;MQ0=0;MQRankSum=-8.137;QD=27.26;ReadPosRankSum=3.938;VQSLOD=2.9626;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,25:26:60.17:678,60,0	1/1:0,15:15:45.13:509,45,0	0/0:22,0:22:60.11:0,60,733	0/0:20,0:20:45.13:0,45,644	1/1:3,28:31:72.12:798,72,0	1/1:0,27:27:75.16:832,75,0	1/1:1,13:14:27.07:306,27,0	1/1:4,30:34:90.24:1010,90,0	1/1:3,11:14:33.09:373,33,0	1/1:4,26:30:66.19:747,66,0	1/1:0,23:23:54.15:611,54,0	1/1:2,18:20:51.14:576,51,0	1/1:1,13:14:39.11:441,39,0	1/1:1,15:16:39.11:441,39,0	0/0:26,0:26:72.20:0,72,963	1/1:1,17:18:48.14:542,48,0	1/1:3,15:18:39.11:441,39,0	1/1:0,8:8:21.06:238,21,0	1/1:0,16:16:48.06:508,48,0	1/1:0,31:31:84.17:934,84,0	1/1:2,16:18:33.09:374,33,0	1/1:1,27:28:57.16:645,57,0	1/1:4,22:26:51.14:576,51,0	1/1:3,20:23:42.01:475,42,0	1/1:0,20:20:54.15:610,54,0	1/1:1,32:33:90.25:1019,90,0	1/1:2,30:32:84.17:932,84,0	1/1:1,9:10:21.06:238,21,0
chr10	32850324	.	G	GATT	13173.56	PASS	AB=0.897;AC=54;AF=0.964;AN=56;BaseQRankSum=1.477;DP=505;FS=3.574;HRun=0;HaplotypeScore=201.4010;InbreedingCoeff=-0.0402;MQ=89.78;MQ0=0;MQRankSum=-10.300;QD=26.09;ReadPosRankSum=3.026;VQSLOD=4.8769;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:20:38.75:362,39,0	1/1:8,0:8:20.89:178,21,0	0/1:19,4:24:99:214,0,310	0/1:28,0:29:68.74:69,0,390	1/1:26,0:26:71.54:709,72,0	1/1:20,0:20:53:529,53,0	1/1:10,0:10:28.06:288,28,0	1/1:24,0:24:72.14:891,72,0	1/1:12,0:12:29.92:344,30,0	1/1:25,0:25:68.47:925,68,0	1/1:17,0:17:44.85:618,45,0	1/1:17,0:17:48.68:580,49,0	1/1:16,0:16:44.80:457,45,0	1/1:14,0:14:41.68:382,42,0	1/1:22,0:22:59.99:866,60,0	1/1:13,0:13:38.77:398,39,0	1/1:8,0:8:17.83:150,18,0	1/1:8,0:8:15.90:181,16,0	1/1:13,0:13:36.03:482,36,0	1/1:25,0:25:68.50:576,69,0	1/1:7,0:7:14.74:95,15,0	1/1:19,0:19:43.57:432,44,0	1/1:18,0:18:52.97:398,53,0	1/1:12,0:12:11.82:79,12,0	1/1:27,0:27:77.66:858,78,0	1/1:28,0:28:78.07:931,78,0	1/1:31,0:31:86.82:1001,87,0	1/1:12,0:12:18.01:183,18,0
chr10	32850666	.	C	CAGGCAGGCATG	29857.39	PASS	AB=0.923;AC=46;AF=0.852;AN=54;BaseQRankSum=-4.707;DP=632;FS=12.956;HRun=0;HaplotypeScore=204.0581;InbreedingCoeff=0.7591;MQ=87.15;MQ0=0;MQRankSum=-10.856;QD=56.76;ReadPosRankSum=0.988;VQSLOD=3.4154;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:33,10:43:40.38:1886,40,0	1/1:4,6:10:24.08:1221,24,0	0/0:27,0:27:51.17:0,51,1410	0/0:32,0:32:60.16:0,60,1532	./.	1/1:18,11:31:54.19:2740,54,0	1/1:17,9:26:27.09:1436,27,0	1/1:27,0:27:36.12:1619,36,0	1/1:17,13:31:51.17:2563,51,0	1/1:17,2:23:21.07:899,21,0	0/1:12,1:13:0:0,0,0	1/1:15,16:32:60.21:3096,60,0	1/1:13,6:22:27.09:1281,27,0	1/1:12,13:28:48.16:2418,48,0	0/0:27,0:27:60.21:0,60,1849	1/1:9,8:18:39.13:1960,39,0	1/1:15,4:19:18.06:904,18,0	1/1:5,5:11:24.08:1184,24,0	1/1:17,5:21:33.11:1626,33,0	1/1:12,3:15:6.02:328,6,0	1/1:29,7:36:24.55:1044,25,0	1/1:19,2:21:6.96:239,7,0	0/1:10,1:11:0:0,0,0	1/1:11,5:17:3.48:165,3,0	1/1:19,0:19:9.03:445,9,0	1/1:18,6:24:24.08:1260,24,0	1/1:15,6:22:33.11:1377,33,0	1/1:2,3:5:3.01:165,3,0
chr10	32851572	.	TCG	T	3552.23	PASS	AB=1.000;AC=48;AF=0.923;AN=52;BaseQRankSum=-1.408;DP=482;FS=0.000;HRun=0;HaplotypeScore=102.7896;InbreedingCoeff=0.3492;MQ=42.77;MQ0=52;MQRankSum=-2.611;QD=8.77;ReadPosRankSum=-0.743;VQSLOD=3.1076;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:26,1:27:50.81:476,51,0	1/1:11,0:11:16.95:110,17,0	./.	./.	1/1:15,0:14:11.98:99,12,0	1/1:18,0:18:14.59:93,15,0	1/1:14,0:13:11.94:101,12,0	1/1:8,9:12:35.67:247,36,0	1/1:15,0:15:24.54:227,25,0	1/1:19,0:17:36.58:317,37,0	0/0:16,0:16:8.23:0,8,36	1/1:15,0:15:10.36:91,10,0	1/1:15,0:15:6.22:37,6,0	1/1:21,0:19:3.30:127,3,0	0/1:22,0:21:0.53:1,0,461	1/1:18,0:18:25.33:198,25,0	1/1:15,0:14:1.56:86,2,0	1/1:9,0:9:23.88:200,24,0	1/1:14,0:9:15.45:167,15,0	0/1:19,0:17:7.81:8,0,52	1/1:8,0:7:2.88:18,3,0	1/1:17,0:14:14.74:121,15,0	1/1:13,0:12:20.88:192,21,0	1/1:23,1:22:8.32:58,8,0	1/1:12,0:11:8.16:58,8,0	1/1:23,0:21:23.33:295,23,0	1/1:15,1:14:26.63:205,27,0	1/1:8,0:5:0.01:21,0,0
chr10	32851586	.	T	TCACACA	5094.40	PASS	AB=1.000;AC=33;AF=0.589;AN=56;BaseQRankSum=4.171;DP=491;FS=6.994;HRun=0;HaplotypeScore=133.6881;InbreedingCoeff=-0.0968;MQ=49.75;MQ0=41;MQRankSum=-0.610;QD=13.23;ReadPosRankSum=2.271;VQSLOD=3.3836;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:16.31:0,16,109	0/1:10,0:10:1.87:330,0,2	0/0:23,0:3:5.81:0,6,101	0/0:34,0:11:23.68:0,24,300	1/1:14,0:14:15.02:260,15,0	0/1:19,0:18:26.47:207,0,26	0/1:12,0:11:13.40:140,0,13	0/1:16,0:13:64.20:64,0,84	1/1:11,0:11:15.46:310,15,0	0/1:25,0:23:13.66:621,0,14	1/1:17,0:17:3.01:51,3,0	0/1:15,0:15:45.38:104,0,45	0/1:13,0:13:42.14:56,0,42	0/1:20,0:18:12.08:12,0,42	0/0:22,0:21:53.98:0,54,1072	0/1:17,0:17:99:352,0,141	0/1:13,0:13:93.71:117,0,94	1/1:7,0:7:17.42:293,17,0	0/1:21,0:16:94.59:354,0,95	1/1:7,15:22:2.03:53,2,0	0/1:14,0:13:0.10:0,0,0	1/1:22,0:19:0.20:345,0,0	1/1:14,0:13:4.46:363,4,0	0/1:25,0:23:0.01:0,0,0	1/1:14,0:13:12.03:244,12,0	0/1:24,0:23:91.97:671,0,92	0/1:13,0:11:12.93:46,0,13	1/1:5,0:4:8.98:102,9,0
chr10	32851588	.	T	TCACACACA	8755.90	PASS	AB=0.667;AC=49;AF=0.875;AN=56;BaseQRankSum=2.095;DP=531;FS=23.384;HRun=0;HaplotypeScore=147.8096;InbreedingCoeff=0.5760;MQ=50.86;MQ0=41;MQRankSum=-0.915;QD=19.59;ReadPosRankSum=1.140;VQSLOD=2.3596;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:27:13.78:74,14,0	1/1:9,0:10:14.92:468,15,0	0/0:27,0:6:8.86:0,9,185	0/0:36,0:12:6.93:0,7,301	1/1:15,0:15:15.05:383,15,0	1/1:20,0:19:17.07:353,17,0	1/1:12,0:11:8.87:215,9,0	1/1:18,0:15:26.10:308,26,0	1/1:10,0:10:21.05:499,21,0	1/1:27,0:25:63.07:1230,63,0	1/1:8,10:20:2.91:68,3,0	1/1:3,11:16:3.48:123,3,0	1/1:13,0:13:2.61:82,3,0	1/1:6,0:20:2.80:13,3,0	0/0:21,0:20:38.95:0,39,880	1/1:21,0:21:24.08:621,24,0	1/1:11,4:17:14.88:224,15,0	1/1:8,0:8:24:538,24,0	1/1:21,0:16:32.97:648,33,0	1/1:23,0:21:3.01:72,3,0	0/1:9,6:17:0.18:0,0,0	1/1:24,0:21:16.65:547,17,0	1/1:17,0:16:20.44:529,20,0	1/1:8,0:27:2.84:9,3,0	1/1:15,0:14:14.34:367,14,0	1/1:25,0:24:23.85:1161,24,0	1/1:13,0:11:3.01:69,3,0	1/1:5,0:4:9.03:158,9,0
chr10	32851596	.	A	ACACA	5314.74	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=3.779;DP=563;FS=16.035;HRun=0;HaplotypeScore=136.3297;InbreedingCoeff=0.5719;MQ=54.49;MQ0=33;MQRankSum=-2.108;QD=11.45;ReadPosRankSum=1.353;VQSLOD=3.3090;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:26:30.79:397,31,0	1/1:10,0:10:15.05:257,15,0	0/0:38,0:12:8.96:0,9,132	0/0:42,0:19:4.71:0,5,185	1/1:17,0:17:15.05:245,15,0	1/1:18,0:17:17.91:239,18,0	1/1:13,0:12:9.03:136,9,0	1/1:19,0:18:22.71:248,23,0	1/1:11,0:11:21.05:312,21,0	1/1:26,0:25:56.97:716,57,0	1/1:18,0:18:11.16:64,11,0	1/1:17,0:17:3.01:58,3,0	1/1:17,0:17:3.01:68,3,0	1/1:22,0:20:2.59:12,3,0	0/0:19,0:19:38.95:0,39,571	1/1:23,0:23:18.04:259,18,0	1/1:19,0:18:8.94:81,9,0	1/1:10,0:10:20.82:220,21,0	1/1:19,0:18:29.80:314,30,0	1/1:24,0:22:3.01:36,3,0	1/1:20,0:19:0.15:1,0,0	1/1:25,0:23:17.41:302,17,0	1/1:18,0:17:20.79:283,21,0	1/1:30,0:28:2.94:18,3,0	1/1:16,0:15:15.51:227,16,0	1/1:25,0:25:45.60:664,46,0	1/1:5,9:13:3.01:35,3,0	1/1:6,0:6:9.03:124,9,0
chr10	32852478	.	G	GT	16093.06	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-9.750;DP=537;FS=1.150;HRun=4;HaplotypeScore=48.7611;InbreedingCoeff=0.9774;MQ=86.87;MQ0=0;MQRankSum=-7.587;QD=33.67;ReadPosRankSum=3.191;VQSLOD=5.2543;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,30:30:78.26:1067,78,0	1/1:0,10:10:21.07:287,21,0	0/0:22,0:22:54.10:0,54,575	0/0:16,0:16:44.99:0,45,471	1/1:1,16:17:45.15:615,45,0	1/1:3,19:21:51.17:698,51,0	1/1:1,13:14:39.11:515,39,0	1/1:4,27:31:81.24:1076,81,0	1/1:3,14:17:39.13:533,39,0	1/1:4,18:22:60.19:797,60,0	1/1:1,20:21:54.09:714,54,0	1/1:0,16:16:48.16:656,48,0	1/1:2,20:22:51.17:697,51,0	1/1:3,11:14:36.11:480,36,0	0/0:21,0:21:60.15:0,60,663	1/1:0,10:10:30.10:410,30,0	1/1:1,20:21:51.17:698,51,0	1/1:3,14:17:39.13:533,39,0	1/1:3,26:29:78.20:1013,78,0	1/1:3,21:24:57.14:749,57,0	1/1:3,11:14:33.11:451,33,0	1/1:1,18:19:45.11:594,45,0	1/1:0,12:12:27.09:369,27,0	1/1:4,21:25:51.17:698,51,0	1/1:1,15:16:39.13:533,39,0	1/1:2,26:28:75.25:1022,75,0	1/1:2,21:23:57.17:761,57,0	1/1:0,3:3:9.03:123,9,0
chr10	32852825	.	T	TGTGTGTGTGTGA	9677.71	PASS	AB=0.929;AC=43;AF=0.768;AN=56;BaseQRankSum=-1.084;DP=504;FS=7.868;HRun=0;HaplotypeScore=150.1229;InbreedingCoeff=0.2228;MQ=43.74;MQ0=25;MQRankSum=-2.533;QD=22.88;ReadPosRankSum=0.377;VQSLOD=3.3864;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,0:10:11.49:156,11,0	1/1:7,0:7:8.99:311,9,0	0/0:33,0:17:36.58:0,37,468	0/0:21,0:11:9.44:0,9,155	0/1:27,0:26:53.20:98,0,53	1/1:18,0:17:2.99:24,3,0	0/1:14,0:13:8.67:150,0,9	1/1:17,0:16:11.73:516,12,0	1/1:20,0:20:20.74:565,21,0	1/1:20,0:18:25.99:1004,26,0	1/1:3,7:17:1.03:178,1,0	1/1:15,0:13:17.99:338,18,0	1/1:17,0:15:19.78:217,20,0	1/1:16,2:18:23.08:716,23,0	0/0:26,0:26:69.19:0,69,1987	1/1:6,2:8:5.80:343,6,0	1/1:19,0:18:42.06:1068,42,0	1/1:14,0:12:23.90:432,24,0	1/1:14,0:9:7.14:620,7,0	0/1:21,1:22:3.71:401,0,4	0/1:12,0:10:13.75:14,0,14	0/1:7,13:23:18.67:175,0,19	0/1:20,0:20:4.01:106,0,4	1/1:19,0:18:16.86:491,17,0	0/1:22,0:20:69.72:530,0,70	1/1:20,0:18:15.59:590,16,0	1/1:5,13:23:12.03:485,12,0	1/1:2,0:2:3.01:150,3,0
chr10	32852850	.	TGATA	T	2022	PASS	AB=0.955;AC=27;AF=0.587;AN=46;BaseQRankSum=1.664;DP=425;FS=0.000;HRun=0;HaplotypeScore=96.9431;InbreedingCoeff=0.4750;MQ=49.79;MQ0=33;MQRankSum=0.149;QD=9.23;ReadPosRankSum=0.439;VQSLOD=2.6959;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:9:12.04:0,12,209	0/0:6,0:6:6.02:0,6,137	./.	./.	0/1:21,0:20:99:152,0,289	./.	./.	./.	1/1:14,1:15:9.03:134,9,0	0/0:9,0:6:3.01:0,3,69	0/0:13,0:11:12.04:0,12,273	1/1:6,5:11:15.05:209,15,0	1/1:11,3:13:21.07:306,21,0	1/1:12,2:14:9.03:125,9,0	1/1:15,0:22:0.42:1,0,0	0/0:8,0:8:6.02:0,6,138	1/1:11,1:12:6.02:86,6,0	1/1:7,0:7:3:28,3,0	0/0:14,0:14:12.04:0,12,275	0/1:19,2:20:99:193,0,308	0/0:7,0:7:0:0,0,0	0/0:16,0:15:11.31:0,11,272	1/1:14,0:14:12.02:153,12,0	1/1:8,1:8:6.02:77,6,0	0/1:19,1:18:99:113,0,254	1/1:15,1:14:18.04:247,18,0	1/1:14,2:16:15.05:223,15,0	1/1:2,3:5:9.03:134,9,0
chr10	32855878	.	TAG	T	13736.03	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-1.671;DP=612;FS=0.000;HRun=0;HaplotypeScore=84.9049;InbreedingCoeff=0.9751;MQ=82.42;MQ0=3;MQRankSum=-7.714;QD=27.58;ReadPosRankSum=6.880;VQSLOD=5.7773;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,36:45:90.29:1145,90,0	1/1:1,13:14:36.12:458,36,0	0/0:34,0:29:10.02:0,10,624	0/0:58,0:49:99:0,102,1552	1/1:8,20:27:48.15:611,48,0	1/1:2,22:24:57.18:726,57,0	1/1:3,11:14:33.11:420,33,0	1/1:8,14:22:39.12:497,39,0	1/1:3,15:17:39.12:496,39,0	1/1:5,15:19:42.08:512,42,0	1/1:2,10:12:21.07:267,21,0	1/1:2,12:14:36.12:458,36,0	1/1:1,14:15:36.11:458,36,0	1/1:2,14:16:36.12:458,36,0	0/0:21,0:21:48.15:0,48,772	1/1:5,11:17:32.94:396,33,0	1/1:2,17:19:33.11:420,33,0	1/1:2,6:8:18.06:226,18,0	1/1:4,11:15:33.05:387,33,0	1/1:6,21:27:54.17:687,54,0	1/1:4,28:32:72.23:916,72,0	1/1:2,28:29:66.21:840,66,0	1/1:1,17:18:45.14:573,45,0	1/1:0,19:19:42.13:534,42,0	1/1:0,22:22:60.19:764,60,0	1/1:3,19:22:57.18:723,57,0	1/1:5,16:21:42.13:534,42,0	1/1:0,6:6:18.06:229,18,0
chr10	32856119	.	AGTGT	A	1712.64	PASS	AB=0.798;AC=38;AF=0.864;AN=44;BaseQRankSum=2.275;DP=454;FS=14.735;HRun=0;HaplotypeScore=127.0315;InbreedingCoeff=0.0204;MQ=63.55;MQ0=13;MQRankSum=-2.583;QD=5.04;ReadPosRankSum=1.554;VQSLOD=1.8641;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:10,7:17:6.02:93,6,0	1/1:4,1:5:3.01:46,3,0	./.	./.	1/1:22,5:27:3.01:47,3,0	0/1:12,4:16:14.93:84,0,15	1/1:14,1:17:9.01:98,9,0	./.	./.	1/1:13,2:15:3.01:46,3,0	1/1:10,1:11:6.02:92,6,0	1/1:9,6:15:12.04:185,12,0	1/1:7,3:10:3.01:46,3,0	1/1:16,5:21:15.04:232,15,0	0/0:19,0:19:12.04:0,12,207	1/1:11,1:13:9.01:97,9,0	1/1:9,1:9:3.01:46,3,0	0/1:3,4:8:0.36:150,0,0	1/1:17,0:16:5.23:45,5,0	1/1:17,1:18:3.01:46,3,0	./.	1/1:15,1:15:6:70,6,0	0/1:15,1:17:3.48:56,0,3	1/1:15,0:15:5.93:63,6,0	1/1:21,1:23:4.56:50,5,0	0/1:26,2:28:14.49:82,0,14	1/1:16,3:19:12.49:149,12,0	./.
chr10	32856408	.	T	TTGTGTG	6161.75	PASS	AB=0.896;AC=44;AF=0.846;AN=52;BaseQRankSum=-1.529;DP=612;FS=12.991;HRun=0;HaplotypeScore=171.9620;InbreedingCoeff=0.2939;MQ=57.36;MQ0=4;MQRankSum=-2.367;QD=11.39;ReadPosRankSum=0.262;VQSLOD=3.0609;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:32:11.87:293,12,0	0/0:5,0:5:0.47:0,0,1	./.	./.	1/1:35,0:35:23.71:360,24,0	1/1:18,4:24:15.05:424,15,0	1/1:21,2:22:8.70:238,9,0	1/1:22,0:22:9.03:223,9,0	1/1:16,3:21:12.04:352,12,0	1/1:15,3:21:24.08:652,24,0	1/1:10,0:21:3.01:69,3,0	1/1:18,2:25:3.01:96,3,0	1/1:13,5:20:8.49:287,8,0	1/1:14,1:15:6.01:191,6,0	0/0:9,0:15:1.77:0,2,4	1/1:22,4:26:8.42:164,8,0	0/1:14,0:19:10.38:68,0,10	1/1:8,0:10:6.91:132,7,0	1/1:13,3:18:21.89:437,22,0	1/1:20,5:29:15.05:419,15,0	1/1:27,5:36:3.01:95,3,0	1/1:15,0:17:6.01:113,6,0	1/1:14,3:21:11.71:322,12,0	1/1:18,0:25:8.16:224,8,0	1/1:16,3:25:14.86:366,15,0	0/1:31,0:31:68.86:69,0,184	1/1:11,4:20:18.53:568,19,0	0/0:5,0:6:12.04:0,12,224
chr10	32857324	.	A	ACACACACACC	11919.60	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=0.825;DP=503;FS=8.707;HRun=0;HaplotypeScore=165.2848;InbreedingCoeff=0.9398;MQ=59.37;MQ0=13;MQRankSum=-3.527;QD=26.61;ReadPosRankSum=-0.670;VQSLOD=3.5230;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:28:46.51:346,47,0	1/1:6,0:6:14.94:120,15,0	0/0:20,0:15:38.20:0,38,421	0/0:22,0:8:23.74:0,24,199	1/1:5,15:23:23.80:432,24,0	1/1:36,0:35:89.69:1311,90,0	1/1:19,0:18:44.93:512,45,0	1/1:21,0:21:57.02:501,57,0	1/1:11,0:11:29.90:287,30,0	1/1:15,0:15:44.92:600,45,0	1/1:23,0:21:35.75:630,36,0	1/1:17,0:16:32.82:426,33,0	1/1:22,0:20:46.46:700,46,0	1/1:9,0:10:23.68:314,24,0	0/0:13,0:13:29.84:0,30,402	1/1:13,0:12:29.44:414,29,0	1/1:22,0:22:53.88:908,54,0	1/1:13,0:12:30.84:383,31,0	1/1:21,0:21:54.86:637,55,0	1/1:17,0:16:29.50:297,29,0	1/1:18,0:16:30.88:480,31,0	1/1:21,0:20:44.01:496,44,0	1/1:5,1:19:19.22:361,19,0	1/1:13,0:13:20.98:281,21,0	1/1:6,6:16:5.85:270,6,0	1/1:20,0:19:44.98:548,45,0	1/1:15,0:14:27.09:458,27,0	1/1:5,0:4:12.02:206,12,0
chr10	32858625	.	TA	T	23557.75	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=5.196;DP=658;FS=7.001;HRun=2;HaplotypeScore=98.4532;InbreedingCoeff=0.9780;MQ=81.47;MQ0=1;MQRankSum=-8.568;QD=40.20;ReadPosRankSum=2.858;VQSLOD=4.6274;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,23:25:66.22:920,66,0	1/1:0,7:7:21.07:294,21,0	0/0:22,0:22:63.63:0,64,938	0/0:19,0:19:54.10:0,54,745	1/1:1,42:43:99:1741,126,0	1/1:2,28:30:90.30:1249,90,0	1/1:1,18:19:54.16:736,54,0	1/1:0,30:30:87.27:1182,87,0	1/1:0,17:17:51.17:713,51,0	1/1:0,32:32:96.32:1338,96,0	1/1:1,20:21:63.21:878,63,0	1/1:1,24:25:75.24:1031,75,0	1/1:0,23:23:66.22:912,66,0	1/1:2,17:19:57.19:786,57,0	0/0:31,0:31:93.32:0,93,1471	1/1:1,27:28:81.26:1110,81,0	1/1:1,17:18:51.14:690,51,0	1/1:1,13:14:39.13:544,39,0	1/1:0,20:20:60.20:834,60,0	1/1:1,26:27:81.26:1114,81,0	1/1:0,14:13:39.13:545,39,0	1/1:0,24:24:69.23:957,69,0	1/1:1,31:32:93.31:1296,93,0	1/1:2,14:16:45.11:605,45,0	1/1:1,30:31:93.29:1274,93,0	1/1:1,30:30:90.29:1241,90,0	1/1:1,34:35:99:1465,105,0	1/1:1,2:3:9:105,9,0
chr10	32858672	.	A	AT	17853.34	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-2.049;DP=576;FS=2.094;HRun=5;HaplotypeScore=90.0347;InbreedingCoeff=0.9684;MQ=64.32;MQ0=0;MQRankSum=-5.098;QD=33.69;ReadPosRankSum=0.889;VQSLOD=4.9775;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,17:20:45.06:553,45,0	1/1:1,8:9:24.08:316,24,0	0/0:9,0:9:21.01:0,21,208	0/0:9,0:8:7.85:0,8,137	1/1:5,38:43:99:1309,102,0	1/1:2,20:22:60.20:789,60,0	1/1:5,7:12:30.08:380,30,0	1/1:4,31:36:99:1333,102,0	1/1:1,14:15:42.14:551,42,0	1/1:5,19:24:63.20:828,63,0	1/1:2,22:24:63.20:828,63,0	1/1:6,17:23:48.14:617,48,0	1/1:1,12:13:39.11:498,39,0	1/1:1,17:18:54.18:709,54,0	0/0:28,0:28:75.17:0,75,797	1/1:4,24:28:72.21:930,72,0	1/1:2,12:14:33.11:434,33,0	1/1:1,11:12:36.10:458,36,0	1/1:5,13:19:42.15:596,42,0	1/1:2,21:23:60.20:789,60,0	1/1:2,10:11:27.09:355,27,0	1/1:1,12:13:36.12:473,36,0	1/1:6,30:36:99:1294,99,0	1/1:0,12:12:30.10:395,30,0	1/1:6,29:35:99:1239,99,0	1/1:4,27:31:81.24:1035,81,0	1/1:4,25:29:66.21:868,66,0	1/1:0,7:7:21.07:276,21,0
chr10	32861466	.	G	GACAGAC	10110.82	PASS	AB=0.928;AC=44;AF=0.786;AN=56;BaseQRankSum=-3.808;DP=546;FS=5.450;HRun=0;HaplotypeScore=127.0141;InbreedingCoeff=0.3391;MQ=52.57;MQ0=13;MQRankSum=4.991;QD=20.10;ReadPosRankSum=7.206;VQSLOD=3.6013;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:10,29:41:9.49:118,0,9	1/1:4,0:4:8.61:135,9,0	0/0:13,0:6:18.01:0,18,248	0/1:22,0:9:1.54:2,0,83	1/1:21,0:20:27.09:420,27,0	1/1:20,0:17:38.30:540,38,0	1/1:30,0:29:65.06:939,65,0	1/1:39,0:38:21.41:1073,21,0	1/1:20,0:20:39.10:571,39,0	1/1:16,0:14:12.37:581,12,0	1/1:22,0:20:21.07:339,21,0	1/1:9,0:8:15.93:224,16,0	1/1:6,0:11:2.79:99,3,0	1/1:18,0:17:35.04:513,35,0	0/0:23,0:23:48.12:0,48,705	1/1:16,0:16:5.56:384,6,0	1/1:17,0:16:29.01:438,29,0	0/1:14,0:13:37.91:307,0,38	0/1:24,0:22:46.49:397,0,46	1/1:18,0:18:36.06:512,36,0	1/1:21,0:21:26.56:363,27,0	0/1:15,0:15:7.16:215,0,7	1/1:18,0:15:18.05:269,18,0	1/1:25,0:26:33.05:426,33,0	1/1:20,0:19:30.03:470,30,0	0/1:17,0:16:30.37:321,0,30	1/1:21,0:20:3.78:456,4,0	0/0:7,0:6:6.61:0,7,30
chr10	32863422	.	A	AT	13860.68	PASS	AB=0.941;AC=51;AF=0.911;AN=56;BaseQRankSum=3.803;DP=553;FS=18.181;HRun=8;HaplotypeScore=90.9927;InbreedingCoeff=0.7803;MQ=79.39;MQ0=0;MQRankSum=-4.530;QD=26.76;ReadPosRankSum=2.300;VQSLOD=3.5875;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,18:21:54.12:608,54,0	1/1:1,11:12:30.09:346,30,0	0/0:11,0:11:25.58:0,26,244	0/1:15,1:16:11.98:12,0,143	1/1:6,22:28:60.18:692,60,0	1/1:3,18:21:51.15:589,51,0	1/1:0,14:14:39.12:450,39,0	1/1:8,26:34:72.21:831,72,0	1/1:5,19:24:30.95:598,31,0	1/1:3,26:29:75.21:856,75,0	1/1:2,17:19:51.11:574,51,0	1/1:1,14:15:42.12:485,42,0	1/1:5,24:29:57.17:658,57,0	1/1:3,10:13:23.94:277,24,0	0/0:24,0:24:63.02:0,63,577	1/1:0,16:16:48.14:554,48,0	1/1:2,15:17:39.12:450,39,0	1/1:0,6:6:18.05:207,18,0	1/1:2,11:13:33.04:356,33,0	1/1:3,23:26:66.15:747,66,0	1/1:2,12:14:30.09:346,30,0	1/1:2,19:21:51.15:589,51,0	1/1:1,15:16:41.74:484,42,0	1/1:1,22:23:54.16:623,54,0	1/1:4,28:32:81.24:935,81,0	1/1:7,25:32:72.69:831,73,0	1/1:2,20:22:54.16:623,54,0	1/1:0,5:5:12.04:138,12,0
chr10	32866876	.	A	AACACACAC	8044.74	PASS	AB=0.875;AC=45;AF=0.938;AN=48;BaseQRankSum=-0.163;DP=475;FS=5.154;HRun=0;HaplotypeScore=278.6025;InbreedingCoeff=0.2477;MQ=35.75;MQ0=5;MQRankSum=0.955;QD=20.06;ReadPosRankSum=-0.400;VQSLOD=3.5683;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	1/1:6,0:7:3.01:104,3,0	./.	./.	1/1:22,2:24:8.14:311,8,0	0/1:24,3:28:32.35:658,0,32	1/1:17,2:21:24.08:647,24,0	1/1:19,0:19:27.08:733,27,0	1/1:8,3:11:18.03:521,18,0	1/1:22,0:22:12.03:351,12,0	1/1:25,0:25:12.01:315,12,0	1/1:21,0:20:2.91:24,3,0	./.	1/1:17,0:18:9.03:293,9,0	0/0:17,0:22:12.91:0,13,505	1/1:9,5:14:18.06:736,18,0	1/1:10,0:12:14.91:270,15,0	1/1:7,0:7:12.01:253,12,0	1/1:13,0:13:3:26,3,0	1/1:15,0:16:6.02:208,6,0	1/1:5,0:5:3.01:104,3,0	1/1:27,0:27:9.01:226,9,0	1/1:26,0:25:3.01:89,3,0	1/1:11,0:12:12.03:333,12,0	1/1:20,3:25:27.09:959,27,0	1/1:18,0:18:18.91:436,19,0	1/1:21,0:22:12.03:290,12,0	1/1:7,0:7:8.96:157,9,0
chr10	32866916	.	G	GA	10298.25	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-1.015;DP=411;FS=4.031;HRun=6;HaplotypeScore=92.5240;InbreedingCoeff=0.9701;MQ=57.40;MQ0=4;MQRankSum=-3.546;QD=29.17;ReadPosRankSum=-1.178;VQSLOD=4.7019;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,11:12:30.10:372,30,0	1/1:0,7:7:18.06:223,18,0	0/0:15,0:9:26.94:0,27,245	0/0:15,0:8:21.01:0,21,202	1/1:3,13:16:30.09:372,30,0	1/1:2,21:23:51.16:638,51,0	1/1:6,17:23:51.16:632,51,0	1/1:2,23:25:66.21:827,66,0	1/1:3,11:14:37.35:437,37,0	1/1:3,9:12:24.08:302,24,0	1/1:1,17:18:48.15:599,48,0	1/1:0,10:10:24.08:302,24,0	1/1:0,9:9:21.07:264,21,0	1/1:2,13:15:27.97:335,28,0	0/0:28,0:28:69.15:0,69,700	1/1:1,18:19:51.16:641,51,0	1/1:0,11:11:33.11:415,33,0	1/1:0,8:8:18.06:226,18,0	1/1:0,11:11:33.11:414,33,0	1/1:1,8:9:24.07:295,24,0	1/1:1,7:8:15.05:189,15,0	1/1:3,11:14:32.96:414,33,0	1/1:1,11:12:30.09:374,30,0	1/1:2,13:16:34.30:390,34,0	1/1:4,21:25:51.16:635,51,0	1/1:5,7:12:21.07:264,21,0	1/1:3,16:18:49.44:586,49,0	1/1:0,5:5:12.04:151,12,0
chr10	32869154	.	T	TA	22137.77	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-11.012;DP=589;FS=3.762;HRun=0;HaplotypeScore=54.5671;InbreedingCoeff=0.9876;MQ=85.32;MQ0=0;MQRankSum=-7.608;QD=42.33;ReadPosRankSum=4.803;VQSLOD=5.2773;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,42:43:99:1726,108,0	1/1:0,9:9:24.08:382,24,0	0/0:19,0:19:56.75:0,57,720	0/0:20,0:20:51.13:0,51,626	1/1:0,23:23:63.21:1004,63,0	1/1:0,20:20:57.19:911,57,0	1/1:0,23:23:63.21:1006,63,0	1/1:2,31:33:90.29:1409,90,0	1/1:0,20:20:60.20:959,60,0	1/1:0,16:16:48.16:762,48,0	1/1:0,16:16:45.07:688,45,0	1/1:1,27:28:72.25:1151,72,0	1/1:0,29:29:75.25:1199,75,0	1/1:0,18:18:42.14:671,42,0	0/0:27,0:27:81.22:0,81,1066	1/1:0,20:20:54.18:863,54,0	1/1:0,24:24:66.23:1055,66,0	1/1:0,16:16:45.15:713,45,0	1/1:0,23:23:66.13:933,66,0	1/1:1,13:14:39.13:623,39,0	1/1:0,12:12:24.08:384,24,0	1/1:0,14:14:36.12:575,36,0	1/1:0,21:21:54.18:862,54,0	1/1:0,22:22:60.20:958,60,0	1/1:1,23:24:60.20:959,60,0	1/1:0,25:25:75.26:1193,75,0	1/1:0,26:26:60.20:959,60,0	1/1:0,4:4:12.04:192,12,0
chr10	32872627	.	C	CAA	19065.03	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-6.553;DP=611;FS=0.000;HRun=9;HaplotypeScore=69.8947;InbreedingCoeff=0.9913;MQ=77.14;MQ0=1;MQRankSum=-3.917;QD=33.80;ReadPosRankSum=3.146;VQSLOD=5.0663;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,23:28:56.67:815,57,0	1/1:1,12:15:41.11:571,41,0	0/0:10,0:10:23.99:0,24,241	0/0:15,0:15:22.06:0,22,223	1/1:5,27:32:75.10:1026,75,0	1/1:1,16:17:33.11:508,33,0	1/1:2,14:16:36.12:554,36,0	1/1:8,31:42:94.68:1237,95,0	1/1:2,24:26:60.20:924,60,0	1/1:3,18:23:59.17:847,59,0	1/1:3,22:27:63.17:936,63,0	1/1:2,18:20:51.17:785,51,0	1/1:4,18:24:57.98:807,58,0	1/1:1,20:22:53.67:793,54,0	0/0:21,0:22:47.71:0,48,455	1/1:3,20:26:26.52:740,27,0	1/1:2,19:24:68.71:987,69,0	1/1:0,14:13:27.05:389,27,0	1/1:4,11:17:38.42:489,38,0	1/1:5,25:32:78.22:1141,78,0	1/1:2,12:14:30.10:462,30,0	1/1:0,16:16:36.12:547,36,0	1/1:1,19:21:45.15:693,45,0	1/1:3,19:22:54.18:831,54,0	1/1:0,20:20:54.18:831,54,0	1/1:3,23:27:66.16:931,66,0	1/1:4,24:33:70.70:988,71,0	1/1:0,6:6:15.05:231,15,0
chr10	32874315	.	CTTT	C	4898.59	PASS	AB=0.624;AC=48;AF=0.857;AN=56;BaseQRankSum=-2.142;DP=343;FS=4.631;HRun=16;HaplotypeScore=61.1254;InbreedingCoeff=0.4550;MQ=61.37;MQ0=10;MQRankSum=-1.084;QD=15.50;ReadPosRankSum=3.497;VQSLOD=3.4056;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,15:23:38.80:405,39,0	1/1:1,5:7:17.88:164,18,0	0/0:10,0:7:5.61:0,6,66	0/0:6,0:4:5.03:0,5,31	0/1:2,1:10:9.69:22,0,10	1/1:3,10:14:35.92:357,36,0	1/1:6,7:11:17.88:187,18,0	1/1:15,13:28:27.92:319,28,0	1/1:4,8:13:20.90:211,21,0	1/1:4,5:12:20.68:182,21,0	1/1:3,10:13:26.98:291,27,0	1/1:3,2:7:9.70:96,10,0	1/1:3,2:5:5.89:64,6,0	1/1:4,5:9:7:94,7,0	0/0:11,0:11:24:0,24,343	1/1:7,7:12:17.88:194,18,0	1/1:2,18:27:3.66:434,4,0	1/1:1,10:10:21.01:226,21,0	0/1:15,10:25:12.20:310,0,12	1/1:2,2:4:5.95:65,6,0	1/1:2,4:5:12.03:129,12,0	1/1:1,2:4:11.96:114,12,0	1/1:4,5:9:9.34:124,9,0	1/1:1,5:6:8.99:97,9,0	1/1:6,9:17:25.24:273,25,0	1/1:6,7:14:1.08:203,1,0	1/1:4,9:14:23.91:242,24,0	1/1:1,4:5:9.02:97,9,0
chr10	32876421	.	ATCTG	A	4231.82	PASS	AB=0.991;AC=28;AF=0.500;AN=56;BaseQRankSum=-13.617;DP=682;FS=7.527;HRun=0;HaplotypeScore=145.3763;InbreedingCoeff=-0.5493;MQ=57.07;MQ0=5;MQRankSum=3.695;QD=6.74;ReadPosRankSum=-11.802;VQSLOD=-0.1720;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:26,1:27:76.43:76,0,401	0/1:10,0:10:53.45:53,0,143	0/0:18,0:14:32.08:0,32,266	0/0:9,0:5:12.02:0,12,122	0/1:33,0:33:99:204,0,624	0/1:29,0:28:99:201,0,526	0/1:24,2:26:99:264,0,353	1/1:37,0:36:41.71:485,42,0	0/1:28,0:28:99:190,0,621	0/1:34,0:34:99:142,0,680	0/1:25,0:25:99:237,0,372	0/1:24,1:25:99:160,0,560	0/1:31,0:31:70.90:71,0,752	0/1:28,0:28:58.73:59,0,734	0/0:27,0:27:69.07:0,69,1134	0/1:27,0:27:71.83:72,0,460	0/1:19,0:18:2.10:2,0,422	0/1:18,1:19:99:130,0,256	0/1:16,0:16:99:169,0,186	0/1:30,0:30:99:114,0,649	0/1:17,0:17:99:155,0,234	0/1:23,0:23:99:157,0,415	1/1:4,23:27:29.85:497,30,0	1/1:11,0:11:20.95:169,21,0	0/1:32,0:32:99:133,0,646	0/1:22,0:21:99:130,0,391	0/1:39,0:39:99:309,0,597	0/1:13,0:13:52.44:52,0,155
chr10	32878733	.	AGTGT	A	1361.70	PASS	AB=0.826;AC=18;AF=0.333;AN=54;BaseQRankSum=6.911;DP=618;FS=1.377;HRun=0;HaplotypeScore=108.1080;InbreedingCoeff=0.7246;MQ=66.03;MQ0=10;MQRankSum=-1.220;QD=6.16;ReadPosRankSum=1.800;VQSLOD=2.3480;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:23,7:31:7.06:118,7,0	0/0:2,0:11:5.89:0,6,77	0/0:30,0:24:1.25:0,1,3	./.	0/1:10,3:14:11.24:11,0,27	1/1:16,0:22:12.01:111,12,0	1/1:14,0:28:16.58:149,17,0	0/0:20,0:20:6.49:0,6,80	1/1:11,3:17:5.56:184,6,0	0/0:12,0:12:17.78:0,18,217	0/0:12,0:12:8.87:0,9,119	0/0:23,0:23:18.06:0,18,335	0/0:12,0:15:26.26:0,26,326	0/0:27,0:27:24.07:0,24,454	0/0:32,0:32:48.15:0,48,903	1/1:14,8:23:23.74:319,24,0	1/1:17,12:30:23.95:342,24,0	1/1:11,3:14:11.76:144,12,0	0/0:31,0:30:18.02:0,18,282	0/0:15,0:16:22.98:0,23,354	0/0:34,0:34:44.86:0,45,758	0/0:18,0:18:20.68:0,21,367	0/0:18,0:18:33.04:0,33,527	0/0:35,0:37:54.16:0,54,949	1/1:12,5:18:12.03:168,12,0	0/0:12,0:15:14.72:0,15,171	0/1:18,0:21:4.09:4,0,291	0/0:7,0:7:6.47:0,6,92
chr10	32879614	.	AGGAG	A	2818.43	PASS	AC=42;AF=0.875;AN=48;BaseQRankSum=-0.018;DP=279;FS=0.000;HRun=0;HaplotypeScore=45.5780;InbreedingCoeff=0.2856;MQ=77.62;MQ0=2;MQRankSum=1.676;QD=12.81;ReadPosRankSum=-0.903;VQSLOD=2.1217;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:24:21.50:196,21,0	1/1:4,1:5:3.01:48,3,0	0/0:19,0:12:0:0,0,0	./.	1/1:6,2:8:6.02:96,6,0	1/1:9,0:9:3.01:47,3,0	1/1:11,3:14:9.03:143,9,0	1/1:9,4:13:12.03:165,12,0	1/1:5,4:9:12.04:191,12,0	1/1:7,6:13:15.04:219,15,0	./.	1/1:8,6:14:18.06:287,18,0	1/1:4,1:5:3.01:48,3,0	1/1:5,9:14:18.06:287,18,0	0/0:4,0:4:3.01:0,3,72	1/1:7,5:12:12.04:191,12,0	1/1:9,6:15:12.04:191,12,0	0/0:1,0:1:0.47:0,0,1	1/1:7,2:9:6.02:96,6,0	./.	1/1:6,3:9:9.03:143,9,0	1/1:2,1:3:3.01:38,3,0	./.	1/1:7,6:13:12.04:191,12,0	1/1:5,3:8:3.01:48,3,0	1/1:4,3:7:9.03:143,9,0	1/1:7,2:9:6.02:96,6,0	1/1:3,4:7:3.01:48,3,0
chr10	32880075	.	C	CCAT	26896.92	PASS	AB=0.619;AC=49;AF=0.875;AN=56;BaseQRankSum=-10.767;DP=639;FS=19.217;HRun=0;HaplotypeScore=125.0080;InbreedingCoeff=0.7819;MQ=64.24;MQ0=0;MQRankSum=-6.160;QD=46.70;ReadPosRankSum=5.149;VQSLOD=5.5081;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:10,16:25:10.07:643,0,10	1/1:0,13:15:33.11:737,33,0	0/0:27,0:27:70.75:0,71,1011	0/0:13,0:13:33.04:0,33,481	1/1:1,24:27:54.17:1190,54,0	1/1:2,24:26:66.23:1466,66,0	1/1:3,9:12:8.45:326,8,0	1/1:4,40:45:99:2638,123,0	1/1:0,17:18:21.06:469,21,0	1/1:2,23:25:69.24:1527,69,0	1/1:1,19:20:36.12:790,36,0	1/1:1,27:28:48.16:1072,48,0	1/1:0,17:17:39.05:868,39,0	1/1:0,18:20:42.14:938,42,0	0/0:23,0:23:66.23:0,66,1074	1/1:0,25:25:59.78:1339,60,0	1/1:3,28:32:57.20:1262,57,0	1/1:2,12:14:30.08:624,30,0	1/1:5,15:19:48.16:1059,48,0	1/1:1,27:29:57.20:1260,57,0	1/1:2,14:16:27.08:603,27,0	1/1:1,8:9:2.81:67,3,0	1/1:0,9:9:21.07:469,21,0	1/1:1,13:14:27.09:604,27,0	1/1:1,36:37:75.25:1675,75,0	1/1:0,29:29:87.30:1921,87,0	1/1:3,42:44:99:2345,105,0	1/1:2,16:18:45.15:1005,45,0
chr10	32880114	.	C	CTATGTATG	30.30	PASS	AC=2;AF=0.037;AN=54;BaseQRankSum=1.946;DP=746;FS=2.135;HRun=0;HaplotypeScore=267.7432;InbreedingCoeff=0.6122;MQ=55.52;MQ0=1;MQRankSum=0.713;QD=0.80;ReadPosRankSum=-1.006;VQSLOD=1.9395;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:33,4:36:5.42:110,5,0	0/0:12,0:12:6.02:0,6,151	./.	0/0:10,0:8:3.01:0,3,35	0/0:34,0:34:30.18:0,30,1164	0/0:34,0:34:51.14:0,51,1139	0/0:14,0:14:21.07:0,21,442	0/0:40,0:40:36.07:0,36,662	0/0:25,0:25:21.06:0,21,474	0/0:38,0:38:72.23:0,72,1620	0/0:29,0:29:45.08:0,45,904	0/0:30,0:30:33.07:0,33,625	0/0:23,0:23:27.98:0,28,657	0/0:29,0:29:45.12:0,45,973	0/0:32,0:32:66.17:0,66,1490	0/0:40,0:40:61.96:0,62,1410	0/0:42,0:43:43.21:0,43,1353	0/0:12,0:12:15.05:0,15,376	0/0:16,0:14:15.05:0,15,361	0/0:29,0:29:36.10:0,36,798	0/0:26,0:26:42.60:0,43,1000	0/0:14,0:14:11.87:0,12,301	0/0:13,0:13:18.05:0,18,399	0/0:24,0:24:32.81:0,33,783	0/0:34,0:35:45.10:0,45,909	0/0:32,0:32:42.09:0,42,892	0/0:41,0:40:63.01:0,63,1385	0/0:18,0:18:42.11:0,42,947
chr10	32880250	.	T	TG	33725.75	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-11.913;DP=869;FS=5.955;HRun=0;HaplotypeScore=77.7896;InbreedingCoeff=0.9989;MQ=76.28;MQ0=0;MQRankSum=-6.752;QD=43.24;ReadPosRankSum=5.837;VQSLOD=4.9443;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,70:70:99:3068,193,0	1/1:0,10:10:24.08:384,24,0	0/0:18,0:18:48.16:0,48,662	0/0:29,0:29:84.23:0,84,1114	1/1:2,32:34:86.78:1352,87,0	1/1:0,31:31:75.26:1198,75,0	1/1:0,20:20:51.17:815,51,0	1/1:2,42:44:99:1916,123,0	1/1:1,36:38:96.32:1517,96,0	1/1:1,26:27:78.25:1222,78,0	1/1:0,35:35:99:1631,102,0	1/1:0,33:33:99:1581,99,0	1/1:0,39:39:99:1669,105,0	1/1:0,36:36:84.29:1343,84,0	0/0:42,0:42:99:0,126,1739	1/1:0,43:43:99:1917,120,0	1/1:2,28:30:84.29:1336,84,0	1/1:1,12:13:39.13:611,39,0	1/1:2,23:25:75.19:1099,75,0	1/1:0,20:20:57.19:909,57,0	1/1:1,51:52:99:2223,141,0	1/1:0,10:10:27.09:431,27,0	1/1:0,17:17:48.16:767,48,0	1/1:1,33:35:87.30:1390,87,0	1/1:2,38:40:99:1823,114,0	1/1:0,28:28:84.26:1316,84,0	1/1:0,32:32:90.31:1439,90,0	1/1:0,18:18:48.16:767,48,0
chr10	32881008	.	GAAC	G	1245.75	PASS	AB=0.953;AC=24;AF=0.462;AN=52;BaseQRankSum=1.727;DP=631;FS=50.941;HRun=0;HaplotypeScore=156.3993;InbreedingCoeff=-0.5043;MQ=23.75;MQ0=132;MQRankSum=-2.890;QD=2.45;ReadPosRankSum=4.349;VQSLOD=1.2248;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,1:5:3.01:0,3,62	0/1:11,0:9:6.31:36,0,6	./.	./.	0/1:26,3:22:29.28:63,0,29	1/1:17,2:12:3.22:92,3,0	1/1:18,1:5:5.68:27,6,0	0/0:34,0:2:5.88:0,6,37	0/1:25,1:13:34.06:60,0,34	0/0:17,0:9:8.66:0,9,68	0/1:14,2:14:21.57:49,0,22	0/1:29,1:11:85.86:86,0,119	0/1:34,3:19:99:113,0,251	0/1:26,2:12:73.76:74,0,106	0/0:42,0:40:99:0,99,1913	0/1:11,1:8:11.89:102,0,12	0/1:20,0:5:15.76:31,0,16	0/1:16,0:5:10.98:11,0,63	0/1:11,1:2:11.24:33,0,11	0/1:37,1:30:61.20:128,0,61	0/1:15,0:6:30.87:37,0,31	0/1:38,2:26:28.88:31,0,29	0/1:31,3:17:16.76:61,0,17	1/1:39,3:14:1.59:77,2,0	0/1:11,1:10:36.96:55,0,37	0/1:20,1:16:54.71:121,0,55	0/1:30,0:17:44.70:108,0,45	0/0:4,0:1:2.80:0,3,13
chr10	32881014	.	G	GAAC	186	PASS	AB=0.964;AC=11;AF=0.212;AN=52;BaseQRankSum=-0.288;DP=624;FS=22.807;HRun=0;HaplotypeScore=162.5780;InbreedingCoeff=-0.1272;MQ=23.11;MQ0=135;MQRankSum=-1.727;QD=0.66;ReadPosRankSum=-0.073;VQSLOD=1.1782;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:5:3.01:0,3,51	0/0:13,0:10:9.63:0,10,88	./.	./.	0/1:30,1:24:16:53,0,16	0/0:17,0:10:9.03:0,9,60	0/0:20,0:5:5.25:0,5,23	0/0:40,0:4:4.87:0,5,41	0/0:23,0:11:14.75:0,15,94	0/0:19,0:11:11.70:0,12,93	0/1:16,1:15:34.49:34,0,45	0/0:30,0:11:12.41:0,12,156	0/1:35,0:18:1.58:2,0,267	0/0:25,0:11:16.32:0,16,190	0/0:37,0:35:93.29:0,93,1547	0/1:15,0:8:13.42:13,0,41	0/0:18,0:5:1.83:0,2,101	0/0:16,0:6:8.92:0,9,90	0/0:15,0:1:0.89:0,1,2	0/1:36,1:29:10.09:10,0,261	0/0:14,0:5:1.37:0,1,19	0/1:34,3:24:57.69:58,0,181	0/1:34,1:18:27.04:27,0,54	1/1:38,0:12:8.38:40,8,0	0/1:11,1:10:47.17:47,0,83	0/1:23,0:17:34.89:35,0,83	0/0:29,0:16:39.33:0,39,235	0/0:4,0:1:3:0,3,29
chr10	32881020	.	C	CAAG	1530.17	PASS	AB=0.968;AC=26;AF=0.500;AN=52;BaseQRankSum=4.524;DP=630;FS=57.232;HRun=0;HaplotypeScore=163.6483;InbreedingCoeff=-0.2608;MQ=23.07;MQ0=139;MQRankSum=-2.568;QD=2.86;ReadPosRankSum=1.695;VQSLOD=1.0603;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:5:3.01:0,3,33	0/1:12,1:10:48.06:58,0,48	./.	./.	1/1:31,0:24:18.58:186,19,0	1/1:16,0:9:9.28:78,9,0	1/1:21,0:5:3.07:11,3,0	0/1:44,0:7:25.91:26,0,64	0/1:18,1:11:16.27:66,0,16	0/1:23,0:14:23.71:43,0,24	0/0:18,1:17:4.05:0,4,79	0/1:32,0:11:63.45:63,0,88	0/1:33,1:16:99:161,0,184	0/1:25,1:12:56.92:57,0,125	0/0:37,0:35:84.27:0,84,1248	0/1:13,2:7:3.41:159,0,3	0/1:16,1:5:38.17:63,0,38	0/0:15,0:6:9.02:0,9,115	1/1:15,0:1:3.01:59,3,0	0/1:36,1:30:69.11:137,0,69	0/1:12,1:5:36.88:51,0,37	0/1:36,1:23:2.87:3,0,24	0/1:34,0:17:1.94:72,0,2	0/1:37,0:11:1.73:89,0,2	0/1:15,0:13:51.71:52,0,64	1/1:21,1:17:17.07:173,17,0	0/1:28,1:16:59.43:77,0,59	0/0:4,0:1:3.01:0,3,45
chr10	32881029	.	CAAGAAG	C	1739.47	PASS	AB=0.966;AC=27;AF=0.519;AN=52;BaseQRankSum=7.363;DP=599;FS=76.709;HRun=0;HaplotypeScore=158.2679;InbreedingCoeff=-0.2892;MQ=22.48;MQ0=156;MQRankSum=-3.870;QD=3.62;ReadPosRankSum=3.421;VQSLOD=-0.0927;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:5:2.90:0,3,16	0/1:12,0:7:28.66:38,0,29	./.	./.	0/1:32,0:21:19.94:153,0,20	1/1:13,0:7:11.19:70,11,0	1/1:21,0:4:5.37:33,5,0	0/0:38,0:5:9.51:0,10,78	1/1:18,1:10:12.53:126,13,0	0/1:20,2:11:41.46:146,0,41	0/1:17,1:16:62.07:105,0,62	0/1:29,0:9:48.01:48,0,134	0/1:33,0:16:70.59:71,0,130	0/1:21,1:13:68.65:74,0,69	0/0:36,0:35:95.96:0,96,1869	1/1:19,0:8:22.25:122,22,0	0/1:19,0:5:35.68:36,0,73	0/0:16,0:6:8.96:0,9,143	1/1:19,0:3:2.72:24,3,0	0/1:30,1:24:60.45:242,0,60	0/1:12,0:4:5.61:6,0,50	0/1:29,1:18:80.24:94,0,80	0/1:29,0:16:25.67:84,0,26	1/1:33,0:10:1.52:19,2,0	0/1:14,1:11:94.47:94,0,125	0/1:19,0:16:24.52:122,0,25	0/1:27,1:14:21.22:189,0,21	0/0:10,0:3:3.01:0,3,60
chr10	32881305	.	GAAC	G	82.18	PASS	AB=0.957;AC=9;AF=0.188;AN=48;BaseQRankSum=2.260;DP=702;FS=5.831;HRun=0;HaplotypeScore=94.9948;InbreedingCoeff=-0.1560;MQ=18.03;MQ0=287;MQRankSum=-2.626;QD=0.39;ReadPosRankSum=-3.918;VQSLOD=0.4808;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:7:20.71:21,0,70	0/1:8,1:6:41.54:42,0,93	0/0:11,0:2:5.98:0,6,64	0/0:11,0:1:3.01:0,3,35	0/0:37,0:13:1.37:0,1,224	0/0:8,0:2:6.02:0,6,121	0/1:27,1:5:12.70:13,0,52	./.	0/0:19,0:5:9.03:0,9,189	0/0:43,1:20:44.41:0,44,700	0/0:31,0:19:24.42:0,24,308	0/0:18,1:1:3.01:0,3,61	0/1:19,0:6:0.97:1,0,174	./.	0/0:53,0:28:63.22:0,63,1334	0/0:14,1:4:12.04:0,12,241	0/1:31,1:4:19.69:35,0,20	./.	0/0:22,0:1:3.01:0,3,69	0/1:32,2:17:16.98:17,0,372	./.	0/0:25,0:10:17.92:0,18,230	0/0:32,0:20:18.87:0,19,424	1/1:25,0:6:1.19:3,1,0	0/0:36,1:19:18.78:0,19,506	0/1:31,3:10:66.81:67,0,150	0/0:24,1:6:8.91:0,9,181	0/0:16,0:5:3.01:0,3,42
chr10	32881328	.	AG	A	1334.24	PASS	AB=0.950;AC=34;AF=0.680;AN=50;BaseQRankSum=9.300;DP=356;FS=0.000;HRun=1;HaplotypeScore=77.7255;InbreedingCoeff=0.3266;MQ=32.67;MQ0=52;MQRankSum=-6.744;QD=5.36;ReadPosRankSum=3.729;VQSLOD=0.5146;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:6:11.82:75,12,0	1/1:4,0:3:5.88:36,6,0	0/0:22,0:6:18.06:0,18,281	0/0:21,0:10:11.49:0,11,249	0/1:14,0:7:5.76:49,0,6	1/1:4,0:2:5.90:37,6,0	0/1:8,1:6:0.83:24,0,1	./.	1/1:8,0:3:8.72:50,9,0	0/1:23,2:16:14.02:101,0,14	0/1:18,3:15:8.59:105,0,9	0/0:6,0:1:2.94:0,3,18	1/1:10,0:6:11.82:76,12,0	./.	0/0:38,0:32:87.25:0,87,1327	1/1:9,0:4:11.77:73,12,0	0/1:12,0:3:2.37:28,0,2	1/1:8,0:3:2.96:19,3,0	1/1:8,0:2:2.60:10,3,0	1/1:23,0:15:35.33:229,35,0	./.	1/1:9,0:5:11.33:85,11,0	1/1:15,0:13:9.52:142,10,0	1/1:10,0:7:8.57:48,9,0	1/1:22,0:15:38.10:239,38,0	1/1:12,0:5:8.70:49,9,0	0/1:13,0:4:15.99:16,0,29	0/0:6,0:5:2.98:0,3,21
chr10	32881329	.	GA	G	2958.49	PASS	AB=0.674;AC=38;AF=0.826;AN=46;BaseQRankSum=9.302;DP=335;FS=4.568;HRun=3;HaplotypeScore=71.6083;InbreedingCoeff=0.5095;MQ=33.59;MQ0=45;MQRankSum=-8.342;QD=12.98;ReadPosRankSum=1.663;VQSLOD=2.3728;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,4:6:14.26:151,14,0	1/1:2,1:4:5.88:65,6,0	0/0:22,1:6:18.06:0,18,252	0/0:22,0:10:11.50:0,11,240	1/1:6,6:7:9.50:113,9,0	1/1:1,3:2:6.02:74,6,0	1/1:7,1:6:6.49:68,6,0	./.	1/1:2,4:3:9.03:106,9,0	1/1:12,9:14:25.31:278,25,0	1/1:12,6:15:18.94:215,19,0	./.	1/1:4,6:6:12.04:148,12,0	./.	0/0:36,1:32:87.29:0,87,1244	1/1:2,6:4:12.04:149,12,0	0/1:4,5:3:5.62:62,0,6	1/1:3,3:3:3.01:37,3,0	1/1:2,4:2:3.01:32,3,0	1/1:5,16:15:36.11:433,36,0	./.	1/1:6,2:5:12.03:138,12,0	1/1:6,9:14:26.75:307,27,0	1/1:5,5:7:9.02:98,9,0	1/1:6,14:15:39.12:471,39,0	1/1:8,3:5:9.03:107,9,0	0/1:7,5:4:10.85:51,0,11	./.
chr10	32881330	.	A	AAG	2020.43	PASS	AB=0.955;AC=38;AF=0.826;AN=46;BaseQRankSum=8.540;DP=307;FS=5.772;HRun=0;HaplotypeScore=77.5246;InbreedingCoeff=0.5205;MQ=34.83;MQ0=40;MQRankSum=-8.243;QD=9.62;ReadPosRankSum=2.788;VQSLOD=2.9116;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:10,2:6:9.92:121,10,0	1/1:4,0:4:5.66:48,6,0	0/0:23,0:6:18.06:0,18,268	0/0:22,0:10:19.56:0,20,273	1/1:8,4:7:11.83:99,12,0	1/1:4,0:2:5.85:46,6,0	1/1:7,2:6:4.56:35,5,0	./.	1/1:5,0:3:9.03:122,9,0	1/1:18,1:13:20.53:189,21,0	1/1:15,2:13:15.26:114,15,0	./.	1/1:7,2:6:11.87:131,12,0	./.	0/0:35,0:32:87.30:0,87,1323	1/1:8,0:4:11.53:75,12,0	0/1:8,0:3:4.61:66,0,5	1/1:5,0:3:2.04:6,2,0	1/1:5,1:2:2.04:6,2,0	1/1:21,0:15:33:281,33,0	./.	1/1:4,2:5:11.85:126,12,0	1/1:14,1:13:21.93:174,22,0	1/1:9,1:7:7.18:56,7,0	1/1:18,2:15:36.44:318,36,0	1/1:9,0:4:8.61:64,9,0	0/1:9,1:4:10.90:87,0,11	./.
chr10	32881331	.	A	AGC	892.43	PASS	AB=0.908;AC=24;AF=0.522;AN=46;BaseQRankSum=5.414;DP=267;FS=4.822;HRun=0;HaplotypeScore=79.6671;InbreedingCoeff=-0.0271;MQ=37.11;MQ0=29;MQRankSum=-4.940;QD=5.44;ReadPosRankSum=4.152;VQSLOD=1.7303;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,1:6:10.21:107,10,0	0/1:3,1:4:0.62:48,0,1	0/0:24,0:7:18.06:0,18,278	0/0:20,0:10:19.56:0,20,289	1/1:10,0:6:0.21:11,0,0	1/1:3,0:2:0.12:9,0,0	0/1:5,2:6:19.44:38,0,19	./.	1/1:5,0:3:8.61:65,9,0	0/1:13,0:10:0.59:25,0,1	0/1:13,0:11:14.90:18,0,15	./.	1/1:8,0:6:5.06:54,5,0	./.	0/0:34,0:32:87.30:0,87,1416	0/1:6,0:4:5.49:6,0,5	0/1:6,2:3:4.83:102,0,5	0/0:4,0:2:2.68:0,3,11	0/0:5,0:2:0:0,0,0	0/1:18,3:15:8.67:180,0,9	./.	1/1:6,0:5:5.57:55,6,0	0/1:13,0:13:23.18:50,0,23	0/1:8,1:7:4.33:45,0,4	0/1:17,1:15:1.37:111,0,1	0/1:3,1:3:6.01:51,0,6	0/1:7,0:4:10.97:49,0,11	./.
chr10	32881354	.	GAAGA	G	1443.96	PASS	AB=0.900;AC=34;AF=0.810;AN=42;BaseQRankSum=7.544;DP=189;FS=0.000;HRun=0;HaplotypeScore=73.1564;InbreedingCoeff=0.3043;MQ=39.74;MQ0=21;MQRankSum=-6.888;QD=11.28;ReadPosRankSum=2.034;VQSLOD=2.5593;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,1:7:12.59:127,13,0	1/1:2,0:2:4.25:37,4,0	0/0:25,0:5:15.02:0,15,286	0/0:16,0:9:22.87:0,23,458	1/1:6,0:4:3.01:44,3,0	1/1:2,0:1:2.92:17,3,0	1/1:6,1:5:3:25,3,0	./.	1/1:3,1:3:3.01:37,3,0	0/0:4,0:3:2.88:0,3,15	1/1:6,0:5:9.02:99,9,0	./.	0/1:3,1:3:8.29:59,0,8	./.	0/1:29,0:28:26.46:26,0,1572	./.	1/1:3,0:2:6.01:71,6,0	1/1:2,1:2:2.99:24,3,0	./.	1/1:14,1:11:27.07:352,27,0	./.	1/1:2,0:1:3.01:46,3,0	1/1:9,0:7:15.03:165,15,0	1/1:7,0:6:13.53:92,14,0	1/1:14,0:12:26.91:291,27,0	1/1:2,0:1:3.01:43,3,0	1/1:4,1:2:2.92:17,3,0	./.
chr10	32881356	.	AGAAAC	A	252.53	PASS	AB=0.916;AC=14;AF=0.333;AN=42;BaseQRankSum=3.807;DP=177;FS=2.188;HRun=0;HaplotypeScore=79.0032;InbreedingCoeff=0.1963;MQ=40.41;MQ0=19;MQRankSum=-3.849;QD=4.07;ReadPosRankSum=0.761;VQSLOD=1.7605;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:7,1:7:27.61:30,0,28	1/1:1,1:2:6.02:72,6,0	0/0:25,0:5:15.04:0,15,305	0/0:15,0:9:8.06:0,8,444	0/1:5,0:4:0:0,0,0	0/0:2,0:1:2.92:0,3,17	1/1:6,1:5:2.68:11,3,0	./.	0/1:2,0:1:0:0,0,0	0/0:3,0:2:2.74:0,3,12	0/0:6,0:5:6.01:0,6,26	./.	0/0:4,0:3:3.76:0,4,30	./.	0/0:28,0:27:47.69:0,48,1725	./.	1/1:1,2:2:6.02:69,6,0	0/0:3,0:2:2.88:0,3,15	./.	0/1:11,3:10:12.69:97,0,13	./.	0/0:2,0:1:1.82:0,2,5	0/0:9,0:7:9.87:0,10,42	0/1:5,1:5:7.68:33,0,8	0/1:12,1:11:22.62:26,0,23	1/1:1,1:1:3.01:38,3,0	0/0:5,0:2:2.92:0,3,17	./.
chr10	32881357	.	GA	G	695.32	PASS	AB=0.848;AC=31;AF=0.816;AN=38;BaseQRankSum=7.182;DP=176;FS=0.867;HRun=3;HaplotypeScore=66.6905;InbreedingCoeff=0.3769;MQ=40.43;MQ0=21;MQRankSum=-5.492;QD=6.21;ReadPosRankSum=2.560;VQSLOD=0.6587;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,1:6:12.03:129,12,0	1/1:1,1:2:5.05:40,5,0	0/0:25,0:5:9.03:0,9,130	0/0:16,0:9:20.51:0,21,256	1/1:5,0:4:2.60:10,3,0	./.	1/1:4,3:5:3.01:40,3,0	./.	1/1:1,0:1:2.74:12,3,0	0/0:2,1:2:2.50:0,2,9	1/1:4,0:3:5.09:20,5,0	./.	1/1:3,0:3:2.99:24,3,0	./.	0/1:23,1:27:27.76:28,0,808	./.	1/1:3,0:2:6.01:58,6,0	1/1:3,0:2:1.55:4,2,0	./.	1/1:14,0:10:24.29:162,24,0	./.	1/1:1,1:1:3:26,3,0	1/1:9,1:7:12.68:47,13,0	1/1:5,1:5:14.32:107,14,0	1/1:13,0:11:16.93:76,17,0	1/1:1,0:1:3.01:31,3,0	./.	./.
chr10	32881359	.	A	AGC	1838.93	PASS	AB=0.875;AC=28;AF=0.737;AN=38;BaseQRankSum=7.022;DP=155;FS=1.802;HRun=0;HaplotypeScore=58.8239;InbreedingCoeff=0.4444;MQ=41.95;MQ0=22;MQRankSum=-5.695;QD=26.65;ReadPosRankSum=2.621;VQSLOD=4.4346;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:4,2:5:3.66:143,0,4	0/1:2,0:2:2.89:23,0,3	0/0:24,0:3:9.03:0,9,147	0/0:15,0:8:21.49:0,21,288	1/1:0,1:1:3.01:60,3,0	./.	1/1:6,0:4:3:26,3,0	./.	1/1:2,0:1:2.22:7,2,0	0/0:2,0:1:3:0,3,27	1/1:0,4:3:9.03:175,9,0	./.	1/1:2,0:1:3.01:34,3,0	./.	0/0:28,0:27:27.23:0,27,924	./.	1/1:2,0:2:6.02:79,6,0	1/1:1,1:2:3.01:61,3,0	./.	1/1:10,4:10:25.47:383,25,0	./.	1/1:2,0:1:3.01:48,3,0	1/1:4,5:6:15.05:297,15,0	1/1:2,3:5:14.41:198,14,0	1/1:1,8:7:21.07:399,21,0	1/1:2,0:1:3.01:36,3,0	./.	./.
chr10	32881421	.	GATGA	G	516.73	PASS	AB=0.933;AC=15;AF=0.750;AN=20;BaseQRankSum=4.333;DP=79;FS=6.781;HRun=0;HaplotypeScore=53.8748;InbreedingCoeff=0.2245;MQ=54.59;MQ0=11;MQRankSum=-4.220;QD=13.25;ReadPosRankSum=0.214;VQSLOD=1.5326;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:3,1:4:25.81:26,0,35	./.	0/1:11,0:2:0:0,0,0	0/1:7,0:3:3.37:21,0,3	./.	./.	./.	./.	1/1:1,3:4:9.03:165,9,0	./.	1/1:1,1:2:6.02:93,6,0	./.	./.	1/1:0,2:1:3.01:39,3,0	0/0:32,0:32:20.68:0,21,370	1/1:0,4:4:12.04:204,12,0	./.	./.	./.	./.	./.	1/1:1,1:2:3.01:55,3,0	./.	1/1:2,0:1:1.55:4,2,0	./.	./.	./.	./.
chr10	32881452	.	CAAG	C	306.46	PASS	AB=0.950;AC=20;AF=0.455;AN=44;BaseQRankSum=3.905;DP=171;FS=24.592;HRun=0;HaplotypeScore=62.2140;InbreedingCoeff=0.2683;MQ=37.37;MQ0=14;MQRankSum=-4.232;QD=3.19;ReadPosRankSum=-0.775;VQSLOD=0.1169;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:4:4.56:0,5,37	./.	0/1:12,0:4:1.35:1,0,40	0/0:10,0:4:6:0,6,79	./.	0/0:2,0:2:2.98:0,3,21	0/0:5,0:4:6.01:0,6,60	0/1:12,3:10:99:146,0,140	1/1:13,0:11:2.08:84,2,0	1/1:5,0:4:2.22:7,2,0	1/1:5,0:5:5.42:26,5,0	0/1:5,0:4:1.43:28,0,1	1/1:4,0:3:2.87:17,3,0	0/1:7,0:4:0:0,0,0	0/0:33,0:33:87.30:0,87,1810	1/1:9,0:7:12.21:73,12,0	0/0:3,0:3:5.97:0,6,45	./.	0/1:11,2:6:27.57:39,0,28	0/1:2,0:2:0.17:1,0,0	0/0:2,0:2:6.02:0,6,68	0/0:5,1:6:2.98:0,3,33	1/1:3,0:2:0.89:2,1,0	0/0:2,0:1:3:0,3,26	./.	1/1:3,0:2:2.22:7,2,0	./.	./.
chr10	32881488	.	GA	G	1598.64	PASS	AB=0.700;AC=45;AF=0.865;AN=52;BaseQRankSum=7.098;DP=205;FS=124.560;HRun=3;HaplotypeScore=55.7787;InbreedingCoeff=0.4485;MQ=43.81;MQ0=14;MQRankSum=-7.616;QD=12.59;ReadPosRankSum=2.780;VQSLOD=-0.1459;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,6:4:8.86:88,9,0	1/1:0,3:1:3.01:37,3,0	0/0:24,4:11:30.07:0,30,400	0/0:12,1:4:12.03:0,12,149	1/1:0,1:1:3.01:35,3,0	1/1:0,1:1:3.01:37,3,0	0/1:4,3:6:6.14:31,0,6	1/1:5,13:15:37.36:448,37,0	1/1:4,5:8:8.20:57,8,0	1/1:3,3:5:8.67:58,9,0	1/1:3,1:3:5.19:20,5,0	1/1:5,1:5:7.99:33,8,0	1/1:4,1:4:11.19:73,11,0	1/1:5,2:5:6.08:47,6,0	0/0:33,0:33:96.31:0,96,1338	1/1:5,1:5:8.13:32,8,0	1/1:1,2:3:5.61:47,6,0	./.	1/1:5,5:8:12.04:149,12,0	1/1:2,1:3:8.20:57,8,0	1/1:0,3:3:6.02:74,6,0	1/1:4,2:5:7.64:53,8,0	1/1:2,2:2:2.68:11,3,0	1/1:1,2:2:6.01:63,6,0	1/1:1,1:2:5.56:30,6,0	1/1:2,5:4:9.03:110,9,0	./.	1/1:1,4:5:12.04:146,12,0
chr10	32881489	.	A	AAG	1167	PASS	AB=0.917;AC=36;AF=0.692;AN=52;BaseQRankSum=7.886;DP=209;FS=66.231;HRun=0;HaplotypeScore=63.5712;InbreedingCoeff=0.3226;MQ=43.57;MQ0=15;MQRankSum=-4.897;QD=9.89;ReadPosRankSum=0.825;VQSLOD=0.6778;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,0:5:9.26:65,9,0	1/1:3,0:1:1.25:3,1,0	0/0:29,0:11:26.17:0,26,394	0/0:13,0:4:12.02:0,12,150	1/1:2,0:1:3.01:35,3,0	1/1:2,0:2:4.20:22,4,0	0/1:7,0:6:0.39:22,0,0	0/1:18,0:15:12.23:12,0,34	0/1:10,0:8:0.10:81,0,0	1/1:7,0:6:5.96:64,6,0	1/1:4,0:3:5.99:52,6,0	1/1:6,0:5:9:108,9,0	1/1:4,1:4:10.56:105,11,0	1/1:6,1:5:9.01:100,9,0	0/0:33,0:33:96.31:0,96,1409	1/1:5,1:5:12.01:163,12,0	0/1:3,0:3:3.13:37,0,3	./.	0/0:9,1:8:8.84:0,9,28	1/1:3,0:3:7.55:68,8,0	0/0:3,0:3:0.49:0,0,5	0/1:4,2:5:0.69:74,0,1	1/1:4,0:2:2.98:22,3,0	0/1:2,1:2:11.92:23,0,12	1/1:3,0:3:5.96:44,6,0	1/1:7,0:4:1.06:49,1,0	./.	1/1:5,0:5:11.99:166,12,0
chr10	32881589	.	GAGA	G	9835.34	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=7.018;DP=479;FS=21.356;HRun=0;HaplotypeScore=97.5312;InbreedingCoeff=0.8646;MQ=42.80;MQ0=16;MQRankSum=-2.693;QD=27.24;ReadPosRankSum=3.036;VQSLOD=3.0306;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,25:25:54.18:790,54,0	1/1:1,10:11:24.03:318,24,0	0/0:46,0:9:19.25:0,19,225	0/0:39,0:5:7.06:0,7,143	1/1:2,23:25:45.11:619,45,0	1/1:1,12:13:24.08:351,24,0	1/1:10,3:12:15.05:204,15,0	1/1:7,10:14:20.99:253,21,0	1/1:1,20:21:24.08:351,24,0	1/1:1,16:17:48.16:701,48,0	1/1:0,6:6:15.05:219,15,0	1/1:1,12:12:27.09:395,27,0	1/1:1,13:14:36.12:519,36,0	1/1:1,14:15:27.09:387,27,0	0/0:33,0:33:84.27:0,84,1615	1/1:5,11:16:36.12:515,36,0	1/1:0,12:12:27.09:395,27,0	1/1:3,3:6:15.05:216,15,0	1/1:7,7:11:21.05:283,21,0	1/1:0,7:7:15.05:213,15,0	1/1:0,17:16:27.09:384,27,0	1/1:2,16:18:32.85:451,33,0	1/1:1,14:15:33.04:457,33,0	1/1:3,11:14:13.32:337,13,0	1/1:3,16:19:2.57:447,3,0	1/1:4,14:15:32.38:459,32,0	1/1:1,8:8:24.08:351,24,0	1/1:2,4:6:15.05:219,15,0
chr10	32881682	.	C	CGCAGCAGCAGCA	10149.15	PASS	AC=42;AF=0.840;AN=50;BaseQRankSum=-2.805;DP=493;FS=5.050;HRun=0;HaplotypeScore=152.7347;InbreedingCoeff=0.7407;MQ=61.15;MQ0=1;MQRankSum=-6.562;QD=29.33;ReadPosRankSum=0.187;VQSLOD=4.1993;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:28.78:0,29,364	1/1:11,0:11:11.94:222,12,0	0/0:29,0:23:16.54:0,17,714	0/0:31,0:27:15.30:0,15,637	./.	1/1:13,0:13:8.87:60,9,0	1/1:12,8:29:15.05:766,15,0	1/1:25,0:25:43.48:978,43,0	1/1:16,3:19:33.06:1183,33,0	1/1:12,0:12:5.98:50,6,0	1/1:12,0:11:1.09:4,1,0	1/1:16,4:20:27.08:1158,27,0	1/1:12,4:16:30.03:1086,30,0	1/1:20,5:24:32.77:1380,33,0	0/0:29,0:30:66.12:0,66,1881	1/1:10,7:23:9.03:531,9,0	1/1:16,1:18:21.03:702,21,0	1/1:2,4:7:6.02:355,6,0	1/1:15,0:15:17.96:158,18,0	1/1:6,0:6:9:100,9,0	1/1:32,0:31:27.01:292,27,0	./.	./.	1/1:17,1:18:15.01:398,15,0	1/1:13,0:11:6.01:75,6,0	1/1:9,0:8:5.98:62,6,0	1/1:3,3:12:4.81:239,5,0	1/1:3,4:10:6.02:354,6,0
chr10	32882443	.	GA	G	14738.75	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=3.754;DP=645;FS=4.957;HRun=7;HaplotypeScore=67.5628;InbreedingCoeff=0.9943;MQ=85.04;MQ0=0;MQRankSum=-8.223;QD=25.86;ReadPosRankSum=2.798;VQSLOD=5.7589;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,20:23:57.13:581,57,0	1/1:1,9:10:24.05:245,24,0	0/0:24,0:24:46.25:0,46,544	0/0:23,1:23:16.46:0,16,461	1/1:3,38:41:99:1034,105,0	1/1:0,26:26:57.13:581,57,0	1/1:0,10:10:27.06:275,27,0	1/1:3,25:28:75.15:753,75,0	1/1:3,22:25:60.05:590,60,0	1/1:1,25:26:75.13:755,75,0	1/1:2,23:25:57.12:581,57,0	1/1:0,19:19:51.12:520,51,0	1/1:2,29:31:84.19:857,84,0	1/1:2,23:25:60.13:612,60,0	0/0:27,0:27:72.23:0,72,905	1/1:1,15:16:39.05:387,39,0	1/1:1,17:18:45.10:459,45,0	1/1:2,14:16:36.08:367,36,0	1/1:1,22:23:66.11:654,66,0	1/1:1,28:29:84.12:843,84,0	1/1:1,21:22:57.13:581,57,0	1/1:1,31:32:84.19:856,84,0	1/1:2,26:28:69.16:704,69,0	1/1:2,12:14:30.07:306,30,0	1/1:0,23:23:57.13:581,57,0	1/1:0,21:21:57.11:575,57,0	1/1:2,25:27:72.16:734,72,0	1/1:0,12:12:30.07:306,30,0
chr10	32882650	.	C	CCTGA	43809.73	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=3.474;DP=763;FS=1.427;HRun=0;HaplotypeScore=149.1607;InbreedingCoeff=0.9982;MQ=84.69;MQ0=0;MQRankSum=-11.332;QD=65.00;ReadPosRankSum=5.076;VQSLOD=6.8551;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,21:27:48.08:1312,48,0	1/1:1,10:11:30.10:820,30,0	0/0:33,0:33:84.29:0,84,1570	0/0:26,0:26:69.21:0,69,1258	1/1:5,21:26:54.17:1407,54,0	1/1:7,37:47:99:3034,111,0	1/1:6,14:20:54.19:1431,54,0	1/1:14,31:46:99:3356,132,0	1/1:2,30:34:84.29:2254,84,0	1/1:4,31:38:99:2667,105,0	1/1:0,23:24:60.21:1636,60,0	1/1:4,20:24:57.19:1508,57,0	1/1:2,30:34:75.26:2050,75,0	1/1:2,20:23:57.20:1558,57,0	0/0:30,0:30:87.28:0,87,1652	1/1:5,25:31:75.26:1965,75,0	1/1:4,20:24:59.29:1591,59,0	1/1:4,10:14:33.11:867,33,0	1/1:5,13:22:60.18:1394,60,0	1/1:0,27:28:75.26:2049,75,0	1/1:4,14:19:39.13:1039,39,0	1/1:2,22:24:60.21:1628,60,0	1/1:6,25:30:57.19:1485,57,0	1/1:2,16:18:33.11:901,33,0	1/1:4,27:32:78.27:2135,78,0	1/1:2,25:27:78.27:2073,78,0	1/1:2,38:40:99:3073,114,0	1/1:0,7:8:21.07:574,21,0
chr10	32885299	.	AT	A	13524.11	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=4.788;DP=669;FS=3.004;HRun=9;HaplotypeScore=69.1579;InbreedingCoeff=0.9894;MQ=72.55;MQ0=0;MQRankSum=-2.907;QD=22.43;ReadPosRankSum=2.146;VQSLOD=5.8626;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:21:60.01:0,60,672	1/1:1,4:5:12.01:110,12,0	0/0:13,0:13:29.91:0,30,311	0/0:11,0:11:21.02:0,21,223	1/1:5,29:34:81.02:741,81,0	1/1:4,36:40:99:906,99,0	1/1:2,14:16:39.02:357,39,0	1/1:8,22:30:45.74:548,46,0	1/1:1,14:15:42.02:384,42,0	1/1:1,32:33:96.05:879,96,0	1/1:2,14:16:39.02:357,39,0	1/1:7,26:33:72.02:659,72,0	1/1:4,22:26:63.03:577,63,0	1/1:1,27:28:72.04:659,72,0	0/0:21,0:21:60.18:0,60,692	1/1:0,23:23:63.03:577,63,0	1/1:0,13:13:36.02:330,36,0	1/1:1,10:11:30.02:275,30,0	1/1:3,21:24:63.01:570,63,0	1/1:6,40:46:98.59:1074,99,0	1/1:4,13:17:36.01:329,36,0	1/1:1,23:24:69.04:632,69,0	1/1:2,24:26:31.42:542,31,0	1/1:2,14:16:36.01:330,36,0	1/1:8,26:35:48.46:685,48,0	1/1:3,34:39:99:907,103,0	1/1:3,34:36:92.87:851,93,0	1/1:7,9:16:26.80:247,27,0
chr10	32885575	.	TAA	T	18477.29	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=4.366;DP=712;FS=2.592;HRun=9;HaplotypeScore=87.0085;InbreedingCoeff=0.9989;MQ=77.80;MQ0=4;MQRankSum=-5.303;QD=28.51;ReadPosRankSum=3.213;VQSLOD=5.1953;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,18:22:51.14:594,51,0	1/1:3,10:13:30.09:349,30,0	0/0:18,0:18:45.01:0,45,667	0/0:16,0:16:24.54:0,25,358	1/1:3,33:36:93.26:1081,93,0	1/1:2,18:20:51.15:594,51,0	1/1:5,19:25:41.84:551,42,0	1/1:4,25:29:75.21:873,75,0	1/1:5,21:26:51.14:594,51,0	1/1:1,30:30:87.22:989,87,0	1/1:1,26:27:72.20:839,72,0	1/1:2,21:23:51.15:594,51,0	1/1:2,25:25:63.18:734,63,0	1/1:1,26:26:69.20:804,69,0	0/0:30,0:30:78.27:0,78,1279	1/1:6,25:31:60.17:699,60,0	1/1:2,20:22:48.14:559,48,0	1/1:1,11:12:30.09:349,30,0	1/1:2,28:30:84.23:967,84,0	1/1:5,31:36:87.10:980,87,0	1/1:2,16:18:42.11:489,42,0	1/1:1,28:29:66.18:769,66,0	1/1:0,28:28:84.25:978,84,0	1/1:2,16:18:45.13:524,45,0	1/1:1,24:25:63.19:734,63,0	1/1:2,39:41:99:1363,117,0	1/1:2,34:36:90.26:1049,90,0	1/1:4,12:16:36.08:419,36,0
chr10	32886361	.	GA	G	678.66	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.443;DP=679;FS=0.782;HRun=6;HaplotypeScore=75.6716;InbreedingCoeff=0.9992;MQ=83.94;MQ0=0;MQRankSum=-3.133;QD=23.40;ReadPosRankSum=1.977;VQSLOD=3.0653;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:78.22:0,78,994	0/0:15,0:15:45.13:0,45,577	0/0:26,0:25:69.04:0,69,847	0/0:27,0:27:64.71:0,65,769	0/0:33,0:33:96.29:0,96,1228	0/0:27,0:27:78.20:0,78,969	0/0:23,0:23:54.12:0,54,652	0/0:35,0:35:96.28:0,96,1195	0/0:33,0:33:96.26:0,96,1228	0/0:24,0:24:72.23:0,72,934	0/0:25,0:25:69.22:0,69,891	0/0:26,0:26:75.23:0,75,972	0/0:27,0:27:72.18:0,72,890	0/0:21,0:21:60.19:0,60,777	0/0:30,0:30:90.27:0,90,1156	0/0:38,0:38:99:0,102,1288	0/0:24,0:24:69.21:0,69,892	0/0:12,0:12:30.08:0,30,380	0/0:14,0:14:39.13:0,39,513	0/0:29,0:29:81.23:0,81,1022	0/0:13,0:13:36.11:0,36,460	0/0:25,0:25:66.20:0,66,854	0/0:15,0:15:42.14:0,42,553	1/1:2,27:29:72.18:774,72,0	0/0:21,0:21:60.19:0,60,784	0/0:25,0:25:63.19:0,63,799	0/0:23,0:23:66.21:0,66,868	0/0:13,0:13:39.13:0,39,513
chr10	32887700	.	TACACACAC	T	14830.48	PASS	AB=0.799;AC=46;AF=0.821;AN=56;BaseQRankSum=7.404;DP=717;FS=4.227;HRun=0;HaplotypeScore=226.0753;InbreedingCoeff=0.5281;MQ=54.21;MQ0=10;MQRankSum=-7.050;QD=24.15;ReadPosRankSum=-0.397;VQSLOD=4.2918;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:68.51:0,69,2322	1/1:1,8:9:5.98:98,6,0	0/0:43,0:21:31.34:0,31,795	0/1:34,0:14:24.63:25,0,420	1/1:7,16:25:23.69:600,24,0	1/1:7,21:28:33.11:810,33,0	1/1:6,13:20:9.03:212,9,0	1/1:9,18:27:53.85:873,54,0	1/1:4,16:20:11.85:311,12,0	1/1:3,17:21:51.15:1161,51,0	1/1:6,16:21:18.06:467,18,0	1/1:3,24:27:33.11:853,33,0	1/1:15,32:47:27.20:1179,27,0	1/1:3,15:18:24.08:623,24,0	0/0:23,0:23:51.18:0,51,1918	1/1:9,28:38:41.90:967,42,0	1/1:9,5:14:3.01:78,3,0	0/1:11,1:12:99:138,0,254	1/1:9,8:17:17.95:302,18,0	1/1:7,24:31:32.91:856,33,0	0/1:15,22:37:0.01:0,0,0	1/1:6,16:22:24.08:623,24,0	1/1:3,19:22:30.57:779,31,0	0/1:17,16:33:81.42:270,0,81	1/1:4,13:18:24.08:623,24,0	1/1:12,23:35:66.22:1683,66,0	1/1:6,19:29:32.66:834,33,0	1/1:1,6:7:18.06:467,18,0
chr10	32887863	.	C	CATA	26396.49	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=9.583;DP=570;FS=1.133;HRun=0;HaplotypeScore=125.9352;InbreedingCoeff=0.9878;MQ=64.39;MQ0=0;MQRankSum=-5.733;QD=52.27;ReadPosRankSum=2.879;VQSLOD=7.1721;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:54.18:0,54,867	1/1:0,10:10:20.91:468,21,0	0/0:9,0:9:21.07:0,21,339	0/0:7,0:7:17.07:0,17,202	1/1:1,40:41:99:2382,111,0	1/1:3,25:29:54.18:1189,54,0	1/1:2,10:12:30.10:668,30,0	1/1:9,33:42:99:1947,99,0	1/1:1,14:15:36.12:789,36,0	1/1:4,21:25:60.20:1287,60,0	1/1:1,26:28:75.26:1640,75,0	1/1:2,11:13:30.10:668,30,0	1/1:4,24:29:69.24:1500,69,0	1/1:1,11:12:24.08:535,24,0	0/0:28,0:28:75.23:0,75,1192	1/1:3,24:27:72.25:1592,72,0	1/1:1,11:12:27.09:602,27,0	1/1:0,5:5:15.05:335,15,0	1/1:0,14:17:51.13:929,51,0	1/1:4,26:33:81.24:1726,81,0	1/1:2,10:12:20.94:372,21,0	1/1:0,9:9:27.09:586,27,0	1/1:3,14:17:48.16:1033,48,0	1/1:2,15:17:39.13:854,39,0	1/1:2,21:25:60.21:1338,60,0	1/1:2,22:25:66.20:1417,66,0	1/1:2,34:36:78.27:1738,78,0	1/1:0,13:13:36.12:804,36,0
chr10	32897022	.	GCAACAACAA	G	23992.85	PASS	AB=0.600;AC=47;AF=0.839;AN=56;BaseQRankSum=13.559;DP=743;FS=3.187;HRun=0;HaplotypeScore=206.8531;InbreedingCoeff=0.8111;MQ=57.29;MQ0=4;MQRankSum=-9.689;QD=40.32;ReadPosRankSum=4.354;VQSLOD=4.1495;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:85.98:0,86,3349	1/1:6,10:16:24.08:602,24,0	0/0:47,0:32:54.15:0,54,1740	0/0:31,0:26:43.18:0,43,1712	1/1:9,22:31:50.69:982,51,0	1/1:9,24:33:48.11:1255,48,0	1/1:7,18:25:18.06:465,18,0	1/1:12,26:38:77.91:1193,78,0	1/1:4,30:34:66.23:1782,66,0	1/1:6,30:36:87.04:2089,87,0	1/1:5,12:17:24.01:526,24,0	1/1:6,31:37:66.06:1784,66,0	1/1:10,23:33:63.22:1756,63,0	1/1:7,20:27:57.20:1555,57,0	0/0:37,0:37:87.30:0,87,3715	1/1:4,19:23:51.18:1441,51,0	1/1:7,15:22:15.05:430,15,0	0/1:2,4:6:14.97:35,0,15	1/1:4,11:15:32.61:620,33,0	1/1:2,15:17:38.89:773,39,0	1/1:7,8:15:5.95:104,6,0	1/1:7,27:34:62.80:1374,63,0	1/1:5,15:20:24.08:587,24,0	1/1:6,10:16:12.04:334,12,0	1/1:3,23:26:42.08:1125,42,0	1/1:4,23:27:69:1530,69,0	1/1:12,30:42:54.04:1478,54,0	1/1:2,3:5:6.02:172,6,0
chr10	32897308	.	AGAG	A	11647.08	PASS	AB=0.541;AC=49;AF=0.875;AN=56;BaseQRankSum=7.041;DP=649;FS=14.734;HRun=0;HaplotypeScore=110.4685;InbreedingCoeff=0.7951;MQ=58.22;MQ0=26;MQRankSum=2.128;QD=22.70;ReadPosRankSum=2.159;VQSLOD=3.6713;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,20:25:30.25:645,30,0	1/1:2,6:8:15.05:213,15,0	0/0:48,0:13:6.02:0,6,159	0/0:50,0:20:9.33:0,9,273	1/1:4,14:18:26.96:381,27,0	1/1:6,17:23:27.09:398,27,0	1/1:8,19:26:41.93:587,42,0	1/1:6,13:19:19.18:506,19,0	1/1:4,12:14:21.07:309,21,0	1/1:6,25:29:72.20:1031,72,0	1/1:3,11:14:24.08:343,24,0	1/1:4,15:18:20.79:308,21,0	1/1:5,18:23:42.14:598,42,0	1/1:6,21:26:30.10:435,30,0	0/0:36,0:36:93.26:0,93,1821	1/1:4,17:20:39.13:574,39,0	1/1:12,17:28:42.14:611,42,0	1/1:3,12:14:27.09:398,27,0	1/1:7,13:14:33.08:435,33,0	1/1:1,17:18:36.12:517,36,0	1/1:5,33:38:44.81:648,45,0	1/1:0,19:19:27.09:390,27,0	1/1:3,9:12:18.06:264,18,0	1/1:3,14:18:23.60:353,24,0	1/1:1,21:21:33.11:486,33,0	1/1:6,13:19:36.11:506,36,0	0/1:3,17:20:5.05:491,0,5	1/1:2,7:7:15.05:221,15,0
chr10	32900099	.	CT	C	18415.40	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=7.190;DP=662;FS=8.820;HRun=4;HaplotypeScore=66.1499;InbreedingCoeff=0.9748;MQ=79.03;MQ0=0;MQRankSum=-4.963;QD=33.36;ReadPosRankSum=2.419;VQSLOD=5.3563;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,102,1411	1/1:0,3:3:9.03:108,9,0	0/0:18,0:18:31.51:0,32,604	0/0:20,0:19:57.17:0,57,761	1/1:1,26:27:69.21:828,69,0	1/1:1,31:32:84.26:1008,84,0	1/1:2,25:27:69.08:827,69,0	1/1:2,35:37:99:1259,105,0	1/1:1,19:20:57.17:683,57,0	1/1:0,24:24:72.01:816,72,0	1/1:0,18:18:51.15:608,51,0	1/1:0,20:20:57.17:684,57,0	1/1:0,37:37:99:1296,108,0	1/1:0,21:21:60.18:720,60,0	0/0:36,0:36:99:0,105,1469	1/1:1,22:23:63.19:756,63,0	1/1:1,26:27:72.22:858,72,0	1/1:0,10:10:24.07:288,24,0	1/1:0,10:10:30.05:325,30,0	1/1:0,30:30:87.27:1043,87,0	1/1:0,23:23:66.20:792,66,0	1/1:0,14:14:39.12:468,39,0	1/1:0,20:20:54.01:648,54,0	1/1:1,25:26:75.23:900,75,0	1/1:1,33:34:93.29:1116,93,0	1/1:0,25:25:75.19:875,75,0	1/1:1,39:40:99:1367,114,0	1/1:0,4:4:12.04:144,12,0
chr10	32900702	.	GT	G	7188.79	PASS	AB=0.710;AC=49;AF=0.875;AN=56;BaseQRankSum=3.650;DP=565;FS=0.000;HRun=13;HaplotypeScore=122.3232;InbreedingCoeff=0.4736;MQ=71.75;MQ0=2;MQRankSum=0.242;QD=13.49;ReadPosRankSum=3.205;VQSLOD=4.2605;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,13:16:37.81:268,38,0	1/1:1,9:10:23.84:175,24,0	0/1:16,1:13:26.73:27,0,80	0/0:10,0:10:8.37:0,8,62	1/1:8,27:36:26.05:493,26,0	1/1:6,21:28:32.45:392,32,0	1/1:5,19:25:12.67:328,13,0	0/1:12,24:37:0.66:412,0,1	1/1:3,17:20:24.51:343,25,0	1/1:7,17:26:19.23:274,19,0	1/1:7,22:31:37.44:420,37,0	1/1:5,11:17:28.85:203,29,0	1/1:5,17:22:40.79:300,41,0	1/1:3,19:23:55.65:396,56,0	0/0:4,0:22:48.66:0,49,265	1/1:5,19:26:54.62:378,55,0	1/1:5,15:21:21.05:246,21,0	1/1:5,2:7:2.97:22,3,0	1/1:11,15:27:23.42:317,23,0	1/1:4,18:23:52.70:378,53,0	1/1:3,9:12:23.85:175,24,0	1/1:4,15:19:19.07:280,19,0	0/1:6,14:20:22.59:183,0,23	1/1:0,4:4:8.95:66,9,0	1/1:2,20:23:49.76:356,50,0	1/1:1,14:15:35.78:262,36,0	1/1:2,15:18:45.80:318,46,0	1/1:0,8:8:23.86:175,24,0
chr10	32901899	.	T	TGGG	18720.87	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-9.545;DP=550;FS=59.853;HRun=6;HaplotypeScore=74.8361;InbreedingCoeff=0.9462;MQ=92.05;MQ0=0;MQRankSum=-5.519;QD=42.45;ReadPosRankSum=4.273;VQSLOD=0.4697;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:78.21:0,78,1068	1/1:1,7:8:18.06:382,18,0	0/0:25,0:25:54.04:0,54,710	0/0:24,0:24:54.08:0,54,693	1/1:4,14:20:42.09:847,42,0	1/1:4,17:21:45.15:955,45,0	1/1:3,11:15:33.09:659,33,0	1/1:12,14:26:39.13:787,39,0	1/1:5,10:15:21.07:446,21,0	1/1:4,16:20:42.14:889,42,0	1/1:3,17:21:42.14:892,42,0	1/1:6,7:13:24.08:454,24,0	1/1:4,21:27:60.21:1239,60,0	1/1:1,13:14:27.09:573,27,0	0/0:30,0:30:87.29:0,87,1232	1/1:4,27:32:72.25:1529,72,0	1/1:2,14:16:30.10:637,30,0	1/1:0,9:9:27.09:573,27,0	1/1:9,8:17:18.06:382,18,0	1/1:3,18:21:54.19:1144,54,0	1/1:6,18:24:38.59:828,39,0	1/1:7,10:18:30.10:635,30,0	1/1:5,17:22:48.16:991,48,0	1/1:3,13:18:33.11:681,33,0	1/1:0,18:18:42.14:891,42,0	1/1:5,15:21:51.15:979,51,0	1/1:5,18:23:60.21:1263,60,0	1/1:1,1:2:3.01:64,3,0
chr10	32902567	.	T	TG	11646.04	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=3.647;DP=591;FS=6.498;HRun=3;HaplotypeScore=147.5579;InbreedingCoeff=0.9785;MQ=71.12;MQ0=1;MQRankSum=-3.311;QD=23.11;ReadPosRankSum=4.850;VQSLOD=4.0345;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:36.35:0,36,199	1/1:13,1:14:38.96:368,39,0	0/0:27,0:19:27.60:0,28,336	0/0:21,0:18:27.12:0,27,304	1/1:22,0:22:56.94:539,57,0	1/1:30,0:30:69.11:669,69,0	1/1:13,1:14:30.05:305,30,0	1/1:28,1:29:80.97:758,81,0	1/1:13,0:13:33.05:318,33,0	1/1:15,0:15:41.51:368,42,0	1/1:29,0:29:77.72:718,78,0	1/1:20,0:20:38.96:467,39,0	1/1:30,1:31:75.10:724,75,0	1/1:13,0:14:26.80:235,27,0	0/0:23,0:23:66.15:0,66,737	1/1:25,0:25:44.77:425,45,0	1/1:19,1:20:45.07:443,45,0	1/1:5,0:5:12.02:117,12,0	1/1:26,3:29:73.52:707,74,0	1/1:29,1:30:83.66:751,84,0	1/1:11,0:10:21.04:213,21,0	1/1:29,1:30:77.69:699,78,0	1/1:21,2:23:56.77:538,57,0	1/1:12,0:12:18.02:172,18,0	1/1:27,1:28:75.11:731,75,0	1/1:27,0:27:68.99:648,69,0	1/1:28,0:27:58.91:606,59,0	1/1:4,1:5:12.03:130,12,0
chr10	32902570	.	G	GGT	22301.58	PASS	AB=0.621;AC=49;AF=0.875;AN=56;BaseQRankSum=2.655;DP=623;FS=8.000;HRun=0;HaplotypeScore=132.4470;InbreedingCoeff=0.7738;MQ=69.87;MQ0=1;MQRankSum=-3.955;QD=40.18;ReadPosRankSum=4.461;VQSLOD=6.5671;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:7,0:18:79.69:80,0,81	1/1:1,15:16:38.81:648,39,0	0/0:25,0:17:36.54:0,37,393	0/0:18,0:17:5.35:0,5,290	1/1:4,21:27:54.98:975,55,0	1/1:0,29:31:69.24:1337,69,0	1/1:1,11:12:30.05:555,30,0	1/1:2,32:37:99:1596,111,0	1/1:0,11:14:33.11:636,33,0	1/1:0,17:18:42.09:702,42,0	1/1:1,28:30:73.78:1385,74,0	1/1:1,19:20:39.09:984,39,0	1/1:1,31:33:75.26:1446,75,0	1/1:3,11:15:27.04:463,27,0	0/0:23,0:23:66.14:0,66,942	1/1:1,26:27:45.15:881,45,0	1/1:1,19:20:45.07:846,45,0	1/1:1,5:6:12.04:239,12,0	1/1:5,25:31:68.25:1081,68,0	1/1:3,26:34:84.53:1365,85,0	1/1:1,12:12:21.07:396,21,0	1/1:1,26:30:80.90:1354,81,0	1/1:2,21:24:56.87:932,57,0	1/1:0,11:11:18.06:354,18,0	1/1:1,24:29:75.20:1390,75,0	1/1:0,23:26:72.59:1208,73,0	1/1:0,26:27:66.97:1252,67,0	1/1:1,4:5:11.99:198,12,0
chr10	32903255	.	CT	C	9558.43	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=5.000;DP=424;FS=17.796;HRun=7;HaplotypeScore=44.2334;InbreedingCoeff=0.9567;MQ=85.13;MQ0=0;MQRankSum=-2.520;QD=27.23;ReadPosRankSum=2.188;VQSLOD=3.3097;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:69.20:0,69,842	1/1:0,4:4:12.03:122,12,0	0/0:8,0:9:18.06:0,18,226	0/0:18,0:18:41.88:0,42,486	1/1:0,22:22:66.15:673,66,0	1/1:1,9:10:21.05:214,21,0	1/1:0,21:21:60.14:612,60,0	1/1:2,25:27:72.07:703,72,0	1/1:1,8:9:21.05:214,21,0	1/1:3,14:17:42.09:428,42,0	1/1:2,15:17:42.09:428,42,0	1/1:1,16:17:45.09:455,45,0	1/1:0,15:15:39.05:397,39,0	1/1:1,19:20:54.12:551,54,0	0/0:19,0:19:51.15:0,51,629	1/1:0,14:14:39.09:398,39,0	1/1:0,8:8:24.05:245,24,0	1/1:0,3:3:9.02:92,9,0	1/1:1,14:15:42.07:415,42,0	1/1:0,13:13:36.08:367,36,0	1/1:1,30:31:87.20:888,87,0	1/1:1,15:16:45.10:459,45,0	1/1:2,18:20:54.12:551,54,0	1/1:1,6:7:21.05:214,21,0	1/1:1,5:6:12.03:122,12,0	1/1:4,9:13:27.06:275,27,0	1/1:1,20:21:57.13:580,57,0	1/1:0,5:5:15.03:153,15,0
chr10	32903320	.	AC	A	853.84	PASS	AB=0.933;AC=15;AF=0.268;AN=56;BaseQRankSum=2.623;DP=352;FS=10.039;HRun=10;HaplotypeScore=57.6744;InbreedingCoeff=0.3133;MQ=75.97;MQ0=3;MQRankSum=-2.146;QD=4.99;ReadPosRankSum=5.614;VQSLOD=0.0730;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,15:24:34.64:291,35,0	0/0:3,0:3:8.96:0,9,70	0/1:23,0:19:27.42:27,0,107	0/1:20,0:19:34.83:53,0,35	0/0:11,0:11:11.98:0,12,106	0/1:7,1:8:18.83:20,0,19	0/0:11,0:12:18.03:0,18,183	0/0:14,0:14:12:0,12,120	0/1:8,2:11:2.02:2,0,184	1/1:8,1:9:2.97:26,3,0	0/0:11,0:11:9.01:0,9,91	0/0:19,1:20:21.96:0,22,385	0/0:12,0:12:26.90:0,27,226	0/0:18,0:18:39:0,39,358	0/0:4,0:11:11.78:0,12,87	0/0:8,0:8:20.92:0,21,177	0/0:10,0:10:24.03:0,24,242	0/0:4,0:6:11.46:0,11,66	0/0:14,0:15:26.87:0,27,261	0/0:4,0:4:0:0,0,0	0/0:18,0:18:19.28:0,19,194	0/1:9,0:9:12.80:13,0,80	1/1:9,11:21:34.83:279,35,0	1/1:4,12:16:32.98:284,33,0	0/0:4,0:5:11.99:0,12,102	0/1:7,1:8:16.99:17,0,50	0/1:18,2:20:10.02:10,0,323	0/0:3,0:3:9.01:0,9,92
chr10	32904910	.	GT	G	14971.33	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=4.531;DP=680;FS=5.242;HRun=8;HaplotypeScore=110.6717;InbreedingCoeff=0.9932;MQ=82.63;MQ0=0;MQRankSum=-6.266;QD=24.15;ReadPosRankSum=4.803;VQSLOD=4.4683;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,23:28:72.11:694,72,0	1/1:0,9:9:27.04:261,27,0	0/0:23,0:23:47.81:0,48,500	0/0:18,0:18:39.07:0,39,430	1/1:1,29:30:81.12:782,81,0	1/1:3,32:35:87.13:840,87,0	1/1:4,20:24:54.08:521,54,0	1/1:11,30:41:87.11:833,87,0	1/1:0,19:19:50.96:492,51,0	1/1:7,29:36:61.39:780,61,0	1/1:2,21:23:57.08:550,57,0	1/1:1,18:19:51.08:492,51,0	1/1:0,20:20:57.08:546,57,0	1/1:1,20:21:47.98:463,48,0	0/0:19,0:19:57.17:0,57,678	1/1:1,17:18:51.08:492,51,0	1/1:5,24:29:78.07:739,78,0	1/1:3,17:20:51.08:492,51,0	1/1:3,22:25:63.09:608,63,0	1/1:3,31:34:84.12:811,84,0	1/1:2,16:18:48.08:463,48,0	1/1:3,22:25:60.09:579,60,0	1/1:2,24:26:66.10:635,66,0	1/1:2,8:10:24.03:232,24,0	1/1:4,28:32:81.13:782,81,0	1/1:2,32:34:90.14:869,90,0	1/1:2,35:37:90.14:869,90,0	1/1:1,6:7:15.02:145,15,0
chr10	32905898	.	G	GA	1264.88	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=9.782;DP=732;FS=3.731;HRun=8;HaplotypeScore=73.5801;InbreedingCoeff=0.9267;MQ=62.81;MQ0=6;MQRankSum=-1.249;QD=26.91;ReadPosRankSum=0.696;VQSLOD=4.3237;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,40:47:99:1360,120,0	0/0:9,0:10:29.05:0,29,253	0/0:11,0:9:14.97:0,15,131	0/0:6,0:5:9:0,9,82	0/0:24,1:25:22.40:0,22,459	0/0:31,0:31:81.01:0,81,737	0/0:28,0:26:57:0,57,512	0/0:26,0:25:63.03:0,63,576	0/0:25,0:25:54.49:0,54,495	0/0:25,0:23:66.03:0,66,600	0/0:35,0:35:93.02:0,93,846	0/0:25,0:26:71.07:0,71,637	0/0:25,0:25:57.02:0,57,522	0/0:28,0:28:72:0,72,645	0/0:42,0:42:99:0,120,1093	0/0:26,0:26:75.03:0,75,683	0/0:33,0:33:93.02:0,93,844	0/0:31,0:31:80.95:0,81,731	0/0:19,0:19:51.01:0,51,462	0/0:27,0:26:66.03:0,66,604	0/0:22,0:21:57.02:0,57,521	0/0:33,0:33:81.03:0,81,737	0/0:27,0:28:71.07:0,71,637	0/0:23,0:23:63.03:0,63,576	0/0:36,0:36:99:0,99,906	0/0:29,0:29:78.03:0,78,714	0/0:26,0:26:75.02:0,75,681	0/0:9,0:9:27.01:0,27,247
chr10	32905971	.	GAGAA	G	1665.94	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=9.479;DP=749;FS=3.164;HRun=0;HaplotypeScore=125.3947;InbreedingCoeff=0.9978;MQ=83.99;MQ0=0;MQRankSum=-2.887;QD=36.22;ReadPosRankSum=2.676;VQSLOD=4.1084;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,39:46:99:1761,102,0	0/0:10,0:10:24.08:0,24,629	0/0:26,0:26:55.42:0,55,1264	0/0:20,0:20:46.14:0,46,1165	0/0:28,0:28:81.28:0,81,2109	0/0:19,0:19:54.17:0,54,1335	0/0:14,0:14:39.12:0,39,961	0/0:29,0:29:72.25:0,72,1858	0/0:24,0:24:69.24:0,69,1808	0/0:25,0:25:63.22:0,63,1645	0/0:25,0:25:60.21:0,60,1507	0/0:27,0:27:81.28:0,81,2087	0/0:26,0:26:78.27:0,78,2021	0/0:40,0:40:99:0,111,2887	0/0:49,0:49:99:0,132,3418	0/0:27,0:27:81.28:0,81,2123	0/0:30,0:30:84.26:0,84,2125	0/0:22,0:22:60.21:0,60,1565	0/0:20,0:20:54.19:0,54,1415	0/0:15,0:15:39.12:0,39,968	0/0:40,0:40:99:0,105,2751	0/0:25,0:25:72.25:0,72,1839	0/0:24,0:24:66.23:0,66,1702	0/0:33,0:33:93.32:0,93,2382	0/0:27,0:27:75.26:0,75,1965	0/0:33,0:33:84.29:0,84,2150	0/0:23,0:23:69.24:0,69,1799	0/0:22,0:22:66.17:0,66,1554
chr10	32907855	.	G	GA	7619.15	PASS	AB=0.620;AC=46;AF=0.821;AN=56;BaseQRankSum=-8.249;DP=369;FS=13.824;HRun=9;HaplotypeScore=35.0346;InbreedingCoeff=0.7639;MQ=83.30;MQ0=0;MQRankSum=-3.767;QD=24.19;ReadPosRankSum=2.269;VQSLOD=4.1825;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:29.99:0,30,260	1/1:0,4:5:14.87:147,15,0	0/0:14,0:14:26.99:0,27,234	0/0:17,0:18:25.89:0,26,200	1/1:4,19:24:53.94:563,54,0	1/1:1,14:15:16.06:405,16,0	0/1:1,2:3:17.03:57,0,17	1/1:7,14:21:42.08:447,42,0	1/1:1,8:9:18.05:199,18,0	1/1:2,14:16:42.09:454,42,0	1/1:4,10:14:32.92:346,33,0	1/1:1,5:6:15.04:166,15,0	1/1:6,13:19:42.11:463,42,0	1/1:0,7:7:21.06:232,21,0	0/0:11,0:11:26.98:0,27,234	1/1:0,5:5:15.04:166,15,0	1/1:3,10:14:23.90:246,24,0	1/1:2,14:16:10.06:339,10,0	1/1:0,8:8:24.06:265,24,0	1/1:1,19:20:34.07:591,34,0	1/1:3,8:11:21.06:232,21,0	1/1:2,4:6:12.03:133,12,0	1/1:2,8:10:18.05:199,18,0	1/1:0,13:13:39.11:431,39,0	1/1:2,18:20:42.11:465,42,0	1/1:2,10:12:24.06:265,24,0	1/1:4,21:25:34.01:598,34,0	0/1:7,9:16:1.99:208,0,2
chr10	32909870	.	CGT	C	386.21	PASS	AB=0.921;AC=20;AF=0.385;AN=52;BaseQRankSum=3.974;DP=623;FS=5.506;HRun=0;HaplotypeScore=85.9512;InbreedingCoeff=-0.4932;MQ=64.28;MQ0=12;MQRankSum=0.129;QD=0.90;ReadPosRankSum=1.688;VQSLOD=1.2503;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:41:10.96:49,11,0	0/1:5,1:6:35.75:43,0,36	./.	./.	0/1:18,4:23:47.40:47,0,134	0/1:12,4:16:17.68:18,0,154	0/1:23,1:25:22.80:23,0,237	0/0:30,0:29:8.97:0,9,89	0/0:16,1:18:3.32:0,3,374	0/0:21,0:19:11.99:0,12,133	0/1:19,3:21:3.44:3,0,326	0/1:18,1:19:8.66:9,0,281	0/1:24,1:25:17.87:18,0,423	0/1:17,1:18:25.66:26,0,271	0/0:12,0:12:17.09:0,17,220	0/1:21,2:23:14.67:15,0,200	0/1:25,1:26:32.42:32,0,316	0/1:23,2:26:58.56:59,0,136	0/1:20,0:20:52.92:53,0,77	0/1:20,4:23:14.71:15,0,179	0/1:26,1:29:55.01:55,0,166	0/1:14,0:14:25.52:26,0,161	0/1:21,2:23:28.06:28,0,239	0/0:13,0:21:3.12:0,3,340	0/1:18,0:18:2.73:3,0,317	0/1:28,1:28:11.66:12,0,228	0/0:16,1:17:0.36:0,0,381	0/0:11,0:11:12.04:0,12,167
chr10	32910351	.	TGCCATAATATCA	T	1467.95	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.206;DP=627;FS=3.777;HRun=0;HaplotypeScore=206.0730;InbreedingCoeff=0.9934;MQ=82.57;MQ0=0;MQRankSum=-6.381;QD=77.26;ReadPosRankSum=0.595;VQSLOD=3.4050;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,17:19:42.14:1563,42,0	0/0:7,0:7:21.07:0,21,1315	0/0:18,0:18:54.18:0,54,2770	0/0:20,0:20:56.68:0,57,2818	0/0:23,0:23:69.24:0,69,4112	0/0:34,0:33:99:0,102,6153	0/0:16,0:16:48.16:0,48,2771	0/0:34,0:34:99:0,99,5254	0/0:23,0:23:69.24:0,69,3883	0/0:29,0:29:87.30:0,87,5085	0/0:17,0:17:51.18:0,51,2902	0/0:20,0:20:60.19:0,60,3202	0/0:25,0:25:72.25:0,72,4409	0/0:26,0:26:78.27:0,78,4603	0/0:19,0:19:54.19:0,54,3216	0/0:22,0:22:63.22:0,63,3552	0/0:27,0:27:78.27:0,78,4769	0/0:26,0:26:75.26:0,75,4498	0/0:23,0:23:66.19:0,66,3567	0/0:23,0:23:66.23:0,66,4076	0/0:10,0:10:30.10:0,30,1760	0/0:27,0:27:81.28:0,81,4969	0/0:15,0:15:42.14:0,42,2389	0/0:17,0:17:48.16:0,48,2825	0/0:29,0:29:87.28:0,87,5274	0/0:32,0:32:93.32:0,93,5705	0/0:37,0:37:99:0,108,6257	0/0:9,0:9:24.06:0,24,1305
chr10	32910867	.	GGT	G	207.05	PASS	AB=0.943;AC=14;AF=0.280;AN=50;BaseQRankSum=1.539;DP=662;FS=3.435;HRun=0;HaplotypeScore=84.9697;InbreedingCoeff=-0.0564;MQ=64.87;MQ0=16;MQRankSum=0.547;QD=0.70;ReadPosRankSum=-1.185;VQSLOD=1.3487;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:41:9:0,9,77	0/0:12,0:12:3.01:0,3,44	./.	./.	0/0:21,0:20:9:0,9,88	0/0:21,0:21:6.01:0,6,62	0/0:21,0:21:6.01:0,6,69	0/0:23,0:23:0:0,0,0	0/1:28,0:28:75.72:86,0,76	1/1:25,0:25:2.96:21,3,0	0/0:16,0:16:6.01:0,6,69	0/1:16,0:16:34.01:34,0,117	0/1:25,0:26:35.25:35,0,172	1/1:18,0:17:1.28:21,1,0	0/0:18,0:17:11.75:0,12,106	0/1:34,4:38:1.90:2,0,363	0/1:25,6:31:63.18:63,0,262	0/0:20,0:19:6.02:0,6,88	0/0:21,0:21:9:0,9,81	0/0:18,0:17:14.64:0,15,184	0/1:50,0:50:16.68:17,0,56	0/0:15,0:14:3.01:0,3,43	0/0:18,0:17:6.02:0,6,79	0/1:30,1:30:29.02:29,0,329	0/0:24,0:24:4.89:0,5,158	./.	0/1:22,3:26:19.11:19,0,78	1/1:3,0:6:2.12:13,2,0
chr10	32914476	.	GA	G	782.32	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.914;DP=618;FS=0.818;HRun=2;HaplotypeScore=61.8662;InbreedingCoeff=0.8110;MQ=68.80;MQ0=0;MQRankSum=0.768;QD=26.98;ReadPosRankSum=1.414;VQSLOD=3.3805;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,29:29:63.21:877,63,0	0/0:10,0:10:27.09:0,27,394	0/0:31,0:29:64:0,64,921	0/0:31,0:29:1.61:0,2,779	0/0:21,0:21:59.82:0,60,816	0/0:23,0:23:69.21:0,69,983	0/0:27,0:27:78.10:0,78,1028	0/0:28,0:28:81.27:0,81,1166	0/0:23,0:23:69.22:0,69,985	0/0:20,0:20:60.20:0,60,855	0/0:21,0:21:63.19:0,63,878	0/0:25,0:25:75.15:0,75,1014	0/0:18,0:18:54.15:0,54,738	0/0:27,0:27:81.24:0,81,1144	0/0:20,0:20:60.14:0,60,781	0/0:21,0:21:63.19:0,63,884	0/0:26,0:26:75.23:0,75,1073	0/0:27,0:27:75.54:0,76,947	0/0:20,0:20:57.17:0,57,788	0/0:27,0:27:81.22:0,81,1092	0/0:20,0:20:57.07:0,57,784	0/0:16,0:16:48.16:0,48,702	0/0:20,0:20:60.19:0,60,851	0/0:24,0:24:69.20:0,69,964	0/0:25,0:25:75.22:0,75,1041	0/0:12,0:12:36.12:0,36,525	0/0:21,0:21:60.20:0,60,876	0/0:5,0:5:15.02:0,15,197
chr10	32917712	.	TGAGGAA	T	793.51	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.692;DP=789;FS=9.957;HRun=0;HaplotypeScore=156.6347;InbreedingCoeff=0.9996;MQ=84.15;MQ0=0;MQRankSum=-6.130;QD=22.67;ReadPosRankSum=-0.767;VQSLOD=2.7884;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,28:35:39.13:888,39,0	0/0:14,0:14:42.12:0,42,1257	0/0:27,0:27:63.21:0,63,1880	0/0:22,0:22:51.08:0,51,1405	0/0:26,0:26:78.27:0,78,2706	0/0:43,0:43:99:0,129,4353	0/0:21,0:21:63.22:0,63,2196	0/0:36,0:36:90.31:0,90,3088	0/0:25,0:25:69.24:0,69,2363	0/0:28,0:28:81.27:0,81,2619	0/0:15,0:15:39.13:0,39,1294	0/0:28,0:28:72.25:0,72,2436	0/0:29,0:29:78.27:0,78,2694	0/0:36,0:36:99:0,102,3313	0/0:48,0:48:99:0,141,4676	0/0:39,0:39:99:0,114,3748	0/0:21,0:21:54.17:0,54,1757	0/0:22,0:22:60.21:0,60,1995	0/0:26,0:26:78.27:0,78,2714	0/0:23,0:23:63.22:0,63,2128	0/0:43,0:43:99:0,117,4047	0/0:22,0:22:63.22:0,63,2083	0/0:23,0:23:66.06:0,66,2155	0/0:32,0:32:84.25:0,84,2787	0/0:14,0:14:39.13:0,39,1357	0/0:34,0:34:87.30:0,87,2999	0/0:43,0:43:99:0,123,4192	0/0:14,0:14:36.12:0,36,1210
chr10	32919310	.	GA	G	425.73	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.544;DP=457;FS=6.006;HRun=8;HaplotypeScore=50.2667;InbreedingCoeff=0.9356;MQ=82.58;MQ0=0;MQRankSum=-1.808;QD=21.29;ReadPosRankSum=-0.437;VQSLOD=3.2763;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,19:20:54.08:521,54,0	0/0:7,0:7:18.06:0,18,217	0/0:20,0:18:29.86:0,30,302	0/0:21,0:16:11.44:0,11,197	0/0:22,0:22:60.17:0,60,713	0/0:13,0:13:36.11:0,36,435	0/0:9,0:9:27.07:0,27,315	0/0:36,0:36:96.28:0,96,1140	0/0:13,0:13:39.12:0,39,471	0/0:24,0:24:66.20:0,66,797	0/0:11,0:11:27.08:0,27,317	0/0:11,0:11:27.02:0,27,308	0/0:16,0:16:45.13:0,45,532	0/0:20,0:20:51.15:0,51,605	0/0:12,0:12:36.11:0,36,430	0/0:13,0:13:36.10:0,36,423	0/0:17,0:17:48.09:0,48,540	0/0:7,0:7:15.05:0,15,181	0/0:27,0:27:66.18:0,66,785	0/0:20,0:20:51.15:0,51,606	0/0:15,0:15:45.14:0,45,544	0/0:9,0:9:24.07:0,24,290	0/0:12,0:12:33.10:0,33,398	0/0:9,0:9:24.07:0,24,290	0/0:19,1:20:25.20:0,25,587	0/0:20,0:20:54.12:0,54,625	0/0:19,0:18:54.14:0,54,630	0/0:14,0:14:42.13:0,42,507
chr10	32919465	.	G	GCTTA	1223.94	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-5.171;DP=468;FS=5.228;HRun=0;HaplotypeScore=71.3266;InbreedingCoeff=0.9575;MQ=87.72;MQ0=0;MQRankSum=-4.441;QD=72.00;ReadPosRankSum=1.101;VQSLOD=5.9606;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,17:17:48.08:1319,48,0	0/0:4,0:4:12.04:0,12,251	0/0:18,0:18:54.16:0,54,1066	0/0:16,0:16:42.09:0,42,748	0/0:19,0:19:54.19:0,54,1131	0/0:12,0:12:33.07:0,33,577	0/0:13,0:13:36.12:0,36,754	0/0:30,0:30:84.28:0,84,1717	0/0:9,0:8:27.09:0,27,566	0/0:23,0:23:69.22:0,69,1369	0/0:25,0:25:75.23:0,75,1484	0/0:17,0:17:51.18:0,51,1068	0/0:16,0:16:45.15:0,45,943	0/0:21,0:21:54.19:0,54,1116	0/0:16,0:16:48.15:0,48,968	0/0:15,0:15:45.15:0,45,918	0/0:23,0:23:69.19:0,69,1329	0/0:15,0:15:43.39:0,43,882	0/0:24,0:24:69.22:0,69,1396	0/0:18,0:18:54.19:0,54,1130	0/0:6,0:6:18.06:0,18,377	0/0:8,0:8:24.08:0,24,503	0/0:17,0:17:51.16:0,51,1026	0/0:8,0:8:24.08:0,24,502	0/0:17,0:17:48.14:0,48,965	0/0:21,0:21:63.22:0,63,1321	0/0:25,0:24:75.21:0,75,1528	0/0:15,0:15:33.11:0,33,686
chr10	32922392	.	A	ATG	39.55	PASS	AB=0.660;AC=1;AF=0.018;AN=56;BaseQRankSum=4.296;DP=587;FS=0.000;HRun=0;HaplotypeScore=85.1328;InbreedingCoeff=-0.0196;MQ=54.90;MQ0=12;MQRankSum=-0.781;QD=1.28;ReadPosRankSum=-0.096;VQSLOD=1.5665;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:15,13:29:62.27:114,0,62	0/0:5,0:5:15.05:0,15,232	0/0:27,0:12:36.09:0,36,497	0/0:33,0:11:20.22:0,20,350	0/0:23,0:23:30.68:0,31,449	0/0:28,0:28:74:0,74,1051	0/0:22,0:22:47.73:0,48,698	0/0:18,0:17:48.16:0,48,715	0/0:23,0:23:48.15:0,48,711	0/0:17,0:16:48.14:0,48,691	0/0:15,0:15:39.10:0,39,563	0/0:20,0:20:48.11:0,48,691	0/0:14,0:14:42.11:0,42,589	0/0:17,0:16:35.73:0,36,512	0/0:24,0:24:57.17:0,57,843	0/0:22,0:22:57.15:0,57,832	0/0:28,0:28:69.15:0,69,967	0/0:31,0:31:84.62:0,85,1105	0/0:10,0:9:24.08:0,24,359	0/0:18,0:18:45.13:0,45,667	0/0:27,0:26:60.18:0,60,887	0/0:17,0:17:39.10:0,39,555	0/0:27,0:26:66.20:0,66,974	0/0:19,0:19:42.14:0,42,665	0/0:15,0:15:39.06:0,39,499	0/0:27,0:27:78.25:0,78,1175	0/0:24,0:24:69.15:0,69,965	0/0:5,0:5:15.05:0,15,231
chr10	32925665	.	G	GGTGT	6371.03	PASS	AB=0.924;AC=46;AF=0.920;AN=50;BaseQRankSum=-1.337;DP=504;FS=9.246;HRun=0;HaplotypeScore=148.1730;InbreedingCoeff=0.0297;MQ=58.05;MQ0=9;MQRankSum=1.053;QD=14.19;ReadPosRankSum=-0.806;VQSLOD=3.6464;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:42,0:42:47.55:776,48,0	0/1:4,0:4:0:0,0,0	./.	./.	1/1:12,1:14:6.02:136,6,0	0/1:18,2:22:43.16:486,0,43	0/1:26,3:29:19.82:353,0,20	1/1:22,0:22:18.51:177,19,0	0/1:13,0:14:31.09:209,0,31	1/1:14,0:15:13.59:130,14,0	1/1:8,2:10:9.03:183,9,0	1/1:16,3:17:14.95:320,15,0	1/1:15,2:17:15.04:280,15,0	1/1:19,0:20:15.05:239,15,0	1/1:13,1:13:18.03:306,18,0	1/1:8,0:11:20.81:373,21,0	1/1:11,2:16:1.01:242,1,0	1/1:26,2:30:0.90:602,1,0	1/1:12,0:12:6.02:110,6,0	1/1:10,1:12:12.04:258,12,0	1/1:36,0:34:6.01:68,6,0	1/1:2,0:4:2.74:12,3,0	1/1:12,0:12:3.48:71,3,0	1/1:23,4:31:44.07:679,44,0	./.	1/1:17,0:17:21.05:289,21,0	1/1:19,0:18:7.82:69,8,0	1/1:4,0:4:0.22:1,0,0
chr10	32925674	.	G	GTGTA	3191.53	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=2.798;DP=516;FS=0.874;HRun=0;HaplotypeScore=122.2022;InbreedingCoeff=-0.3858;MQ=50.66;MQ0=17;MQRankSum=1.111;QD=9.17;ReadPosRankSum=6.563;VQSLOD=1.8962;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:34,9:44:66.05:1340,66,0	0/0:4,0:4:3:0,3,26	0/0:22,0:9:23.98:0,24,232	0/0:29,0:11:18.07:0,18,192	0/1:13,0:13:50.88:71,0,51	0/1:22,0:22:99:221,0,236	0/1:28,0:27:99:143,0,283	0/0:25,0:22:43.86:0,44,387	0/1:13,0:13:86.22:86,0,99	0/0:14,0:14:5.88:0,6,220	0/1:9,0:9:53.94:92,0,54	0/1:21,0:19:99:125,0,178	0/1:16,0:16:99:127,0,129	0/1:17,0:17:80.53:81,0,139	0/1:15,0:14:71.55:137,0,72	0/1:11,0:11:32.59:123,0,33	0/1:20,0:20:99:99,0,211	0/1:33,0:33:99:223,0,355	0/1:10,0:9:34.32:34,0,128	0/1:13,0:11:95.98:96,0,104	0/0:34,0:32:38.41:0,38,410	0/0:7,0:6:0.43:0,0,1	0/1:11,0:12:29.29:29,0,93	0/1:34,0:34:99:305,0,160	0/0:11,0:11:20.96:0,21,172	0/1:17,0:17:21.15:21,0,215	0/0:17,0:16:16.15:0,16,231	0/0:5,0:5:7.80:0,8,53
chr10	32929655	.	CT	C	1930.48	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=8.422;DP=742;FS=2.463;HRun=2;HaplotypeScore=70.8397;InbreedingCoeff=0.9979;MQ=82.45;MQ0=0;MQRankSum=-3.794;QD=35.75;ReadPosRankSum=2.390;VQSLOD=4.4131;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,54:54:99:2025,157,0	0/0:21,0:21:63.20:0,63,921	0/0:23,0:23:66.21:0,66,948	0/0:21,0:21:54.04:0,54,665	0/0:21,0:21:63.20:0,63,926	0/0:26,0:26:78.26:0,78,1169	0/0:18,0:18:51.17:0,51,762	0/0:36,0:36:99:0,108,1567	0/0:26,0:26:75.24:0,75,1103	0/0:32,0:32:90.30:0,90,1332	0/0:22,0:22:66.21:0,66,970	0/0:18,0:18:48.15:0,48,701	0/0:25,0:25:72.24:0,72,1077	0/0:39,0:39:99:0,111,1644	0/0:19,0:19:57.19:0,57,854	0/0:23,0:23:66.22:0,66,986	0/0:19,0:19:57.19:0,57,854	0/0:8,0:8:24.08:0,24,359	0/0:32,0:32:93.32:0,93,1393	0/0:25,0:25:72.23:0,72,1057	0/0:36,0:36:99:0,102,1507	0/0:33,0:33:99:0,99,1459	0/0:24,0:24:69.16:0,69,969	0/0:22,0:22:66.18:0,66,944	0/0:34,0:34:99:0,99,1483	0/0:33,0:33:99:0,99,1477	0/0:39,0:39:99:0,114,1642	0/0:13,0:13:39.13:0,39,581
chr10	32929746	.	T	TTC	1684.72	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=0.311;DP=655;FS=1.980;HRun=0;HaplotypeScore=87.5700;InbreedingCoeff=0.9911;MQ=73.39;MQ0=0;MQRankSum=-4.620;QD=34.38;ReadPosRankSum=-1.214;VQSLOD=5.5574;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:19,28:49:99:1780,129,0	0/0:10,0:10:30.10:0,30,404	0/0:21,0:21:48.55:0,49,438	0/0:8,0:8:20.97:0,21,204	0/0:21,0:21:59.42:0,59,727	0/0:22,0:22:65.42:0,65,774	0/0:20,0:20:60.17:0,60,771	0/0:22,0:22:58.86:0,59,671	0/0:27,0:27:81.21:0,81,1024	0/0:35,0:35:99:0,104,1276	0/0:20,0:20:60.16:0,60,778	0/0:18,0:18:54.13:0,54,673	0/0:26,0:26:67.81:0,68,839	0/0:37,0:37:99:0,102,1302	0/0:19,0:19:57.16:0,57,730	0/0:18,0:18:51.16:0,51,691	0/0:19,0:19:52.87:0,53,653	0/0:14,0:14:36:0,36,400	0/0:12,0:12:35.35:0,35,364	0/0:19,0:19:52.85:0,53,616	0/0:29,0:29:84.13:0,84,992	0/0:34,0:34:95.47:0,95,1126	0/0:32,0:32:79.92:0,80,938	0/0:24,0:24:63.16:0,63,803	0/0:26,0:26:72.17:0,72,903	0/0:32,0:32:93.14:0,93,1106	0/0:33,0:33:90.08:0,90,1070	0/0:8,0:8:21.07:0,21,281
chr10	32929854	.	GACGTAACCTGAGCGGTAAT	G	1614.92	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.621;DP=568;FS=6.624;HRun=0;HaplotypeScore=270.0238;InbreedingCoeff=0.9949;MQ=91.31;MQ0=0;MQRankSum=-5.576;QD=89.72;ReadPosRankSum=2.231;VQSLOD=2.1234;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,14:18:33.11:1710,33,0	0/0:8,0:8:21.07:0,21,1467	0/0:26,0:26:71.73:0,72,4767	0/0:22,0:22:66.23:0,66,4663	0/0:25,0:25:72.25:0,72,5935	0/0:16,0:16:42.10:0,42,3179	0/0:21,0:21:63.22:0,63,5154	0/0:31,0:31:87.30:0,87,6824	0/0:28,0:28:78.27:0,78,6468	0/0:22,0:22:63.22:0,63,4746	0/0:19,0:19:54.19:0,54,4830	0/0:15,0:15:42.14:0,42,3658	0/0:23,0:23:66.17:0,66,4968	0/0:22,0:22:66.15:0,66,4904	0/0:25,0:25:75.21:0,75,6033	0/0:22,0:22:60.21:0,60,5319	0/0:20,0:20:60.21:0,60,4982	0/0:11,0:11:33.11:0,33,2622	0/0:21,0:21:51.17:0,51,3376	0/0:19,0:19:57.20:0,57,4765	0/0:23,0:23:66.23:0,66,4940	0/0:25,0:25:63.22:0,63,5400	0/0:16,0:16:45.15:0,45,4010	0/0:22,0:22:66.23:0,66,5566	0/0:15,0:15:45.15:0,45,3880	0/0:19,0:19:57.20:0,57,4509	0/0:23,0:23:66.23:0,66,4863	0/0:11,0:11:30.10:0,30,2511
chr10	32930011	.	CT	C	3095.33	PASS	AB=0.649;AC=44;AF=0.786;AN=56;BaseQRankSum=1.092;DP=372;FS=4.012;HRun=14;HaplotypeScore=45.4578;InbreedingCoeff=0.4536;MQ=78.66;MQ0=7;MQRankSum=-0.473;QD=10.12;ReadPosRankSum=3.153;VQSLOD=2.9352;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:5:6.27:0,6,34	1/1:1,7:8:20.45:133,20,0	0/0:28,0:15:11.07:0,11,96	0/0:14,0:9:9.58:0,10,52	1/1:1,14:16:37.66:249,38,0	1/1:5,5:12:15.90:90,16,0	1/1:2,2:4:5.83:41,6,0	0/1:14,11:23:1:149,0,1	1/1:5,11:16:23.77:164,24,0	1/1:5,18:23:25.58:318,26,0	1/1:1,13:14:4.90:178,5,0	1/1:1,4:6:4.88:26,5,0	1/1:1,8:9:17.84:123,18,0	1/1:3,7:10:17.82:123,18,0	0/0:17,0:17:44.95:0,45,396	1/1:3,11:14:17.65:123,18,0	1/1:5,7:13:5.12:94,5,0	0/1:3,5:8:7.33:50,0,7	1/1:5,7:13:22.80:147,23,0	1/1:2,9:11:23.66:155,24,0	1/1:0,6:7:14.86:103,15,0	1/1:4,12:16:5.31:174,5,0	1/1:3,15:19:38.58:267,39,0	0/1:5,8:15:3.90:69,0,4	1/1:2,15:18:37.74:253,38,0	0/1:6,5:11:10.02:84,0,10	1/1:7,7:14:0.64:100,1,0	1/1:1,3:4:5.95:41,6,0
chr10	32936851	.	G	GC	2407.49	PASS	AC=42;AF=0.875;AN=48;BaseQRankSum=2.535;DP=210;FS=29.686;HRun=1;HaplotypeScore=35.5188;InbreedingCoeff=0.5237;MQ=74.82;MQ0=18;MQRankSum=-6.733;QD=17.45;ReadPosRankSum=0.876;VQSLOD=1.9914;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,14:10:8.77:123,9,0	./.	0/0:23,0:20:47.49:0,47,531	0/0:20,0:19:48.11:0,48,572	./.	1/1:2,11:11:19.87:249,20,0	1/1:3,4:5:9.03:122,9,0	1/1:0,3:2:5.05:50,5,0	1/1:0,5:2:6.02:87,6,0	1/1:0,3:3:5.61:54,6,0	1/1:1,3:3:6.02:73,6,0	1/1:0,8:8:18.06:257,18,0	1/1:1,9:8:12.04:173,12,0	1/1:0,11:9:17.27:218,17,0	0/0:16,0:16:32.76:0,33,427	1/1:0,9:8:18.06:255,18,0	1/1:0,13:11:24.08:349,24,0	1/1:2,4:5:2.80:82,3,0	1/1:3,1:3:5.98:64,6,0	1/1:1,2:1:3.01:37,3,0	1/1:2,3:5:3.01:35,3,0	1/1:2,1:1:2.97:20,3,0	1/1:0,4:2:6.02:87,6,0	./.	./.	1/1:2,3:4:11.25:139,11,0	1/1:2,3:5:3.01:44,3,0	1/1:1,1:2:3:29,3,0
chr10	32954990	.	GA	G	1662.78	PASS	AC=40;AF=0.952;AN=42;BaseQRankSum=0.970;DP=132;FS=0.000;HRun=1;HaplotypeScore=31.7925;InbreedingCoeff=0.0898;MQ=25.31;MQ0=7;MQRankSum=1.663;QD=16.80;ReadPosRankSum=1.594;VQSLOD=3.6832;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	1/1:0,1:1:3.01:37,3,0	./.	0/0:10,0:2:2.20:0,2,30	./.	1/1:0,8:6:8.97:93,9,0	1/1:1,8:6:15.05:182,15,0	1/1:0,1:1:3.01:37,3,0	1/1:1,2:3:3.01:37,3,0	1/1:0,10:8:21.07:260,21,0	./.	1/1:1,12:12:15.01:185,15,0	1/1:0,1:1:3.01:37,3,0	1/1:0,4:4:9.03:111,9,0	1/1:0,2:2:3.01:37,3,0	1/1:1,4:4:3.01:37,3,0	1/1:0,2:2:6.02:74,6,0	1/1:0,1:1:3.01:37,3,0	1/1:1,4:3:9.02:103,9,0	1/1:0,5:4:6.02:74,6,0	./.	./.	1/1:0,1:1:3.01:37,3,0	./.	1/1:0,9:9:9.03:111,9,0	1/1:0,5:5:12.04:149,12,0	1/1:0,11:11:6.02:74,6,0	1/1:0,3:3:3.01:37,3,0
chr10	32956370	.	TA	T	8857.39	PASS	AB=1.000;AC=54;AF=0.964;AN=56;BaseQRankSum=4.292;DP=484;FS=0.000;HRun=1;HaplotypeScore=205.4128;InbreedingCoeff=-0.0533;MQ=60.79;MQ0=0;MQRankSum=-3.585;QD=18.30;ReadPosRankSum=5.831;VQSLOD=4.8189;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,19:20:53.72:413,54,0	1/1:0,17:17:50.73:387,51,0	0/1:8,0:8:60.85:73,0,61	0/1:12,0:12:16.56:80,0,17	1/1:0,18:18:38.87:308,39,0	1/1:0,21:21:56.49:412,56,0	1/1:0,12:12:29.93:238,30,0	1/1:5,25:30:2.93:412,3,0	1/1:1,20:21:37.39:405,37,0	1/1:0,21:21:53.50:374,53,0	1/1:0,23:22:56.45:413,56,0	1/1:1,15:16:19.73:299,20,0	1/1:5,13:18:38.72:292,39,0	1/1:0,14:14:41.81:327,42,0	1/1:0,20:20:50.60:380,51,0	1/1:0,21:21:59.66:461,60,0	1/1:2,8:10:3.87:157,4,0	1/1:0,2:2:5.95:42,6,0	1/1:1,20:21:62.29:431,62,0	1/1:6,21:27:18.37:395,18,0	1/1:1,11:12:32.77:204,33,0	1/1:1,18:19:38.78:306,39,0	1/1:0,18:18:47.79:370,48,0	1/1:0,13:13:38.65:289,39,0	1/1:0,18:18:50.57:375,51,0	1/1:0,19:19:53.46:390,53,0	1/1:0,22:22:53.71:404,54,0	1/1:0,11:11:29.81:221,30,0
chr10	32956736	.	GTC	G	159.57	PASS	AB=0.896;AC=14;AF=0.250;AN=56;BaseQRankSum=7.284;DP=335;FS=26.408;HRun=0;HaplotypeScore=122.0984;InbreedingCoeff=-0.1450;MQ=58.03;MQ0=10;MQRankSum=-3.441;QD=1.15;ReadPosRankSum=0.762;VQSLOD=0.1581;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,2:12:0.43:1,0,0	0/1:13,0:13:11.12:11,0,444	0/0:28,0:14:28.17:0,28,393	0/0:32,0:15:15.62:0,16,279	0/0:12,3:15:11.27:0,11,154	0/0:7,0:9:15.05:0,15,202	0/1:5,0:5:0:0,0,0	0/0:23,0:22:66.22:0,66,1126	0/1:12,0:13:0:0,0,0	0/1:8,0:10:14.33:14,0,369	0/0:15,0:15:17.55:0,18,304	0/1:10,2:11:14.11:14,0,106	0/0:6,2:8:6.50:0,6,164	0/1:4,0:4:19.46:19,0,101	0/0:7,1:8:6.02:0,6,101	0/1:5,1:7:26.02:26,0,76	0/0:5,0:5:9.03:0,9,126	0/0:2,1:3:5.99:0,6,68	0/0:12,0:11:6.13:0,6,319	0/1:19,2:21:8.53:9,0,495	0/0:1,0:1:3.01:0,3,50	0/1:10,2:12:23.89:24,0,184	0/0:13,0:13:15.05:0,15,250	0/0:8,0:8:9.03:0,9,156	0/0:11,2:15:15.52:0,16,264	0/1:13,0:17:99:103,0,628	0/1:5,1:7:61.18:61,0,121	0/1:6,0:6:9.72:10,0,192
chr10	32958052	.	G	GGA	1216.29	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.972;DP=637;FS=25.109;HRun=0;HaplotypeScore=81.5320;InbreedingCoeff=0.9984;MQ=77.82;MQ0=0;MQRankSum=-4.097;QD=38.01;ReadPosRankSum=2.453;VQSLOD=2.9230;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,30:32:72.25:1311,72,0	0/0:10,0:10:30.09:0,30,440	0/0:17,0:17:41.32:0,41,677	0/0:20,0:20:44.84:0,45,613	0/0:30,0:30:87.30:0,87,1331	0/0:19,0:19:57.19:0,57,869	0/0:18,0:18:54.18:0,54,826	0/0:28,0:28:75.24:0,75,1109	0/0:29,0:29:87.27:0,87,1289	0/0:27,0:27:78.25:0,78,1149	0/0:18,0:18:54.16:0,54,784	0/0:21,0:21:63.20:0,63,933	0/0:27,0:27:81.28:0,81,1235	0/0:16,0:16:48.16:0,48,734	0/0:41,0:41:99:0,123,1856	0/0:21,0:21:60.20:0,60,899	0/0:16,0:16:48.16:0,48,735	0/0:10,0:10:27.07:0,27,389	0/0:16,0:16:48.12:0,48,666	0/0:27,0:27:81.28:0,81,1239	0/0:23,0:23:69.22:0,69,1026	0/0:18,0:18:51.16:0,51,760	0/0:27,0:27:78.25:0,78,1169	0/0:18,0:18:54.18:0,54,825	0/0:26,0:26:78.25:0,78,1155	0/0:27,0:27:72.23:0,72,1062	0/0:38,0:38:99:0,114,1702	0/0:17,0:17:42.12:0,42,615
chr10	32958908	.	G	GTTTA	5832.48	PASS	AC=48;AF=0.960;AN=50;BaseQRankSum=-2.824;DP=273;FS=10.907;HRun=0;HaplotypeScore=38.2709;InbreedingCoeff=0.2750;MQ=58.41;MQ0=0;MQRankSum=0.204;QD=22.87;ReadPosRankSum=-0.039;VQSLOD=2.8788;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:12,0:12:7.16:43,7,0	1/1:3,0:3:3.01:50,3,0	./.	./.	1/1:4,5:9:9.03:180,9,0	1/1:7,19:27:39.13:937,39,0	1/1:2,0:2:2.94:18,3,0	1/1:36,0:36:57.10:762,57,0	1/1:9,0:9:6:60,6,0	1/1:5,0:10:15.04:232,15,0	1/1:6,1:9:9.03:177,9,0	1/1:3,4:8:6.02:144,6,0	1/1:6,0:6:9.02:169,9,0	1/1:5,0:5:3.01:54,3,0	0/0:11,0:11:27.08:0,27,404	1/1:1,4:5:3.01:72,3,0	1/1:5,16:21:30.10:721,30,0	1/1:4,7:11:12.04:288,12,0	1/1:3,4:8:15.03:311,15,0	1/1:10,4:14:11.99:199,12,0	1/1:1,1:2:3.01:72,3,0	1/1:2,1:3:3.01:72,3,0	1/1:5,2:7:6.02:144,6,0	./.	1/1:5,4:9:6.02:144,6,0	1/1:5,3:8:9.03:192,9,0	1/1:3,9:12:15.05:360,15,0	1/1:9,10:19:18.06:432,18,0
chr10	32960981	.	A	AT	846.58	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-5.567;DP=569;FS=0.767;HRun=5;HaplotypeScore=57.8256;InbreedingCoeff=0.9917;MQ=85.63;MQ0=0;MQRankSum=-2.019;QD=31.35;ReadPosRankSum=0.657;VQSLOD=4.1528;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,27:27:72.23:941,72,0	0/0:16,0:16:45.11:0,45,484	0/0:21,0:21:54.13:0,54,578	0/0:15,0:15:36.04:0,36,356	0/0:26,0:26:72.16:0,72,765	0/0:17,0:17:51.12:0,51,541	0/0:19,0:19:51.13:0,51,547	0/0:32,0:32:75.17:0,75,801	0/0:18,0:18:54.10:0,54,562	0/0:19,0:19:51.13:0,51,548	0/0:18,0:18:48.12:0,48,516	0/0:17,0:17:45.09:0,45,475	0/0:15,0:15:42.11:0,42,451	0/0:16,0:16:42.09:0,42,444	0/0:21,0:21:54.12:0,54,574	0/0:16,0:16:45.09:0,45,475	0/0:18,0:18:37.91:0,38,502	0/0:16,0:16:46.36:0,46,464	0/0:27,0:27:78.16:0,78,817	0/0:20,0:20:54.13:0,54,580	0/0:24,0:24:63.15:0,63,677	0/0:18,0:18:48.11:0,48,509	0/0:27,0:27:75.17:0,75,797	0/0:21,0:21:63.16:0,63,677	0/0:26,0:26:72.16:0,72,765	0/0:20,0:20:57.14:0,57,612	0/0:32,0:32:93.23:0,93,1000	0/0:7,0:7:18.05:0,18,193
chr10	32963983	.	GA	G	165.02	PASS	AC=2;AF=0.037;AN=54;BaseQRankSum=3.981;DP=351;FS=7.659;HRun=6;HaplotypeScore=31.5862;InbreedingCoeff=0.6875;MQ=75.65;MQ0=0;MQRankSum=-1.397;QD=18.34;ReadPosRankSum=-0.014;VQSLOD=2.1385;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,9:9:24.06:258,24,0	0/0:6,0:6:18.06:0,18,237	0/0:13,0:13:26.28:0,26,370	./.	0/0:24,0:24:57.17:0,57,735	0/0:17,0:17:42.14:0,42,553	0/0:5,0:5:15.05:0,15,197	0/0:24,0:24:60.19:0,60,776	0/0:10,0:10:30.10:0,30,395	0/0:18,0:18:54.17:0,54,697	0/0:18,0:18:51.17:0,51,671	0/0:12,0:12:33.11:0,33,434	0/0:19,0:19:57.17:0,57,735	0/0:8,0:8:24.08:0,24,316	0/0:13,0:13:39.11:0,39,498	0/0:11,0:11:33.11:0,33,433	0/0:25,0:25:75.24:0,75,985	0/0:8,0:8:21.07:0,21,276	0/0:17,0:17:48.13:0,48,615	0/0:20,0:20:54.11:0,54,676	0/0:2,0:2:6.01:0,6,64	0/0:2,0:2:3.01:0,3,39	0/0:7,0:7:21.06:0,21,261	0/0:2,0:2:6.02:0,6,79	0/0:16,0:16:37.36:0,37,477	0/0:14,0:13:39.13:0,39,513	0/0:25,0:24:75.21:0,75,955	0/0:6,0:6:15.05:0,15,197
chr10	32968493	.	A	AT	16126.20	PASS	AB=0.713;AC=51;AF=0.911;AN=56;BaseQRankSum=-7.201;DP=633;FS=0.748;HRun=9;HaplotypeScore=63.0508;InbreedingCoeff=0.3338;MQ=76.10;MQ0=1;MQRankSum=-2.085;QD=26.18;ReadPosRankSum=4.034;VQSLOD=5.2135;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,19:21:34.11:604,34,0	1/1:0,16:16:45.12:498,45,0	0/0:17,0:15:15.84:0,16,205	0/1:16,0:16:11.86:12,0,121	1/1:3,24:27:66.14:717,66,0	1/1:0,29:29:78.21:863,78,0	1/1:4,13:17:13.05:372,13,0	1/1:7,21:28:37.59:608,38,0	1/1:3,15:19:50.97:543,51,0	1/1:1,24:25:75.04:810,75,0	1/1:2,23:25:66.14:716,66,0	1/1:3,21:24:63.16:691,63,0	1/1:4,18:22:51.14:564,51,0	1/1:1,20:21:57.15:631,57,0	1/1:3,18:21:48.13:531,48,0	1/1:2,20:22:31.12:564,31,0	1/1:1,19:19:54.15:597,54,0	1/1:4,9:13:4.03:273,4,0	1/1:6,16:22:47.92:511,48,0	1/1:3,28:31:38.10:864,38,0	0/1:5,15:20:10:356,0,10	1/1:2,27:29:75.20:830,75,0	1/1:4,24:28:65.90:724,66,0	0/1:4,13:17:13.01:326,0,13	1/1:0,27:27:78.21:863,78,0	1/1:3,22:25:66.18:730,66,0	1/1:2,34:35:90.24:996,90,0	1/1:3,12:15:30.08:332,30,0
chr10	32968719	.	CT	C	10568.10	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-3.898;DP=551;FS=5.425;HRun=10;HaplotypeScore=101.0984;InbreedingCoeff=0.8721;MQ=78.45;MQ0=0;MQRankSum=-5.816;QD=20.32;ReadPosRankSum=3.557;VQSLOD=5.1952;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,27:28:71.99:625,72,0	1/1:4,12:16:29.98:260,30,0	0/0:9,0:9:3.26:0,3,51	0/0:22,0:22:31.96:0,32,333	1/1:2,23:25:50.94:443,51,0	1/1:3,22:25:59.98:520,60,0	1/1:2,13:15:29.99:260,30,0	1/1:8,23:31:65.97:573,66,0	1/1:2,12:14:32.99:286,33,0	1/1:2,14:16:32.96:286,33,0	1/1:2,25:27:71.98:625,72,0	1/1:1,15:16:41.97:364,42,0	1/1:1,23:24:68.98:598,69,0	1/1:3,21:24:56.98:494,57,0	1/1:0,22:22:62.99:547,63,0	1/1:2,16:18:41.98:365,42,0	1/1:1,15:16:35.03:292,35,0	1/1:2,3:5:8.98:78,9,0	1/1:4,13:17:38.98:335,39,0	1/1:3,17:20:41.93:361,42,0	1/1:0,9:9:18:156,18,0	1/1:3,19:22:41.96:364,42,0	1/1:2,17:19:47.99:417,48,0	1/1:2,19:21:50.98:443,51,0	1/1:5,24:29:65.98:573,66,0	1/1:3,18:21:44.93:390,45,0	1/1:2,25:27:74.98:651,75,0	1/1:2,10:12:29.99:260,30,0
chr10	32968876	.	T	TAAAACAAAACAAAACAAAAC	65313.17	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-2.319;DP=759;FS=1.016;HRun=0;HaplotypeScore=311.7084;InbreedingCoeff=0.7578;MQ=57.86;MQ0=3;MQRankSum=-5.294;QD=91.73;ReadPosRankSum=3.003;VQSLOD=4.1430;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:43,0:43:67.47:3321,67,0	1/1:8,6:14:15.05:1105,15,0	0/0:27,0:25:23.66:0,24,736	0/0:20,0:15:3.52:0,4,262	1/1:19,20:43:54.15:3740,54,0	1/1:10,14:26:24.08:2139,24,0	1/1:23,0:23:39.13:2195,39,0	1/1:38,0:34:61.45:2622,61,0	1/1:6,7:15:15.05:1333,15,0	1/1:21,20:43:90.31:5853,90,0	1/1:25,14:40:37.64:1839,38,0	1/1:10,8:19:24.08:1660,24,0	1/1:21,14:36:42.14:2980,42,0	1/1:15,19:36:39.13:3326,39,0	1/1:19,0:19:42.14:2316,42,0	1/1:11,8:20:24.08:1982,24,0	1/1:20,0:20:24.05:1127,24,0	1/1:6,0:6:6.02:276,6,0	1/1:20,6:27:56.34:2815,56,0	1/1:21,18:41:63.21:4351,63,0	1/1:4,0:4:3.01:263,3,0	1/1:19,14:34:45.15:3540,45,0	1/1:22,11:33:39.13:2798,39,0	1/1:13,0:13:18.06:1119,18,0	1/1:14,16:30:36.12:2796,36,0	1/1:28,14:43:96.23:6102,96,0	1/1:19,15:34:39:2872,39,0	1/1:12,0:12:14.71:843,15,0
chr10	32969497	.	T	TCACCAC	9714.55	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-3.427;DP=445;FS=2.731;HRun=0;HaplotypeScore=90.5200;InbreedingCoeff=0.6075;MQ=67.96;MQ0=8;MQRankSum=-4.595;QD=25.36;ReadPosRankSum=1.956;VQSLOD=4.1662;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,21:33:20.90:586,21,0	1/1:1,5:6:9.03:298,9,0	0/0:28,0:18:10.84:0,11,213	0/0:34,0:23:19.36:0,19,497	1/1:6,5:13:14.99:229,15,0	1/1:6,12:19:15.05:454,15,0	1/1:11,12:24:18.02:439,18,0	1/1:21,0:21:23.99:311,24,0	1/1:5,10:16:15.05:441,15,0	1/1:6,5:13:20.87:403,21,0	1/1:4,3:7:6.02:135,6,0	1/1:6,5:13:12.04:344,12,0	1/1:5,5:10:8.90:206,9,0	1/1:10,15:25:33.11:1050,33,0	1/1:6,9:16:12.04:389,12,0	1/1:9,7:16:21.07:669,21,0	1/1:5,10:15:15.05:359,15,0	1/1:3,5:8:6.02:199,6,0	1/1:12,3:13:12.04:286,12,0	1/1:2,2:4:6.02:113,6,0	1/1:17,3:20:26.89:429,27,0	1/1:6,3:9:9.03:215,9,0	1/1:6,8:15:11.81:386,12,0	1/1:6,10:16:3.01:99,3,0	1/1:7,6:14:18.06:479,18,0	1/1:7,10:17:33.08:747,33,0	1/1:2,8:13:9.97:299,10,0	1/1:3,1:4:6.02:152,6,0
chr10	32969516	.	CACAACCACT	C	162.05	PASS	AB=0.966;AC=8;AF=0.143;AN=56;BaseQRankSum=1.640;DP=443;FS=0.000;HRun=0;HaplotypeScore=108.7555;InbreedingCoeff=-0.1841;MQ=52.05;MQ0=18;MQRankSum=3.439;QD=1.62;ReadPosRankSum=-4.541;VQSLOD=0.7382;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:31:23.58:0,24,973	0/0:6,0:6:15.05:0,15,441	0/0:38,0:8:5.12:0,5,250	0/0:45,0:23:14.23:0,14,687	0/1:10,0:10:33.92:34,0,603	0/0:16,0:16:6.08:0,6,792	0/0:25,0:25:39.46:0,39,966	0/1:12,7:19:99:114,0,538	0/0:15,0:15:21:0,21,565	0/1:13,0:11:20.54:21,0,701	0/1:6,0:6:1.58:2,0,257	0/0:13,0:13:27.09:0,27,956	0/0:11,0:11:9.08:0,9,631	0/0:20,0:20:42.01:0,42,1189	0/0:13,0:13:18.53:0,19,629	0/0:12,0:12:27.09:0,27,1013	0/0:18,0:18:11.96:0,12,960	0/0:6,0:6:9.03:0,9,278	0/1:16,0:14:21.11:21,0,520	0/1:5,0:5:7.97:8,0,197	0/1:22,0:22:81.45:81,0,599	0/1:9,0:8:1.01:1,0,309	0/0:8,0:8:15.05:0,15,628	0/0:14,0:13:6.02:0,6,158	0/0:16,0:16:8.85:0,9,706	0/0:17,0:17:1.02:0,1,1195	0/0:11,0:11:12.26:0,12,505	0/0:5,0:4:12.04:0,12,497
chr10	32970539	.	CTT	C	8673.03	PASS	AB=0.950;AC=53;AF=0.946;AN=56;BaseQRankSum=-1.160;DP=481;FS=4.442;HRun=12;HaplotypeScore=123.3492;InbreedingCoeff=0.5676;MQ=65.28;MQ0=6;MQRankSum=-2.800;QD=19.80;ReadPosRankSum=3.758;VQSLOD=3.9118;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:16:13.34:75,13,0	1/1:2,4:6:15.02:153,15,0	0/0:40,0:18:23.69:0,24,231	0/1:18,1:11:19.62:20,0,23	1/1:7,14:21:35.97:356,36,0	1/1:8,9:18:41.75:390,42,0	1/1:5,10:14:39.06:388,39,0	1/1:15,3:19:29.97:283,30,0	1/1:4,10:14:39.06:388,39,0	1/1:10,8:20:32.68:387,33,0	1/1:7,15:22:54:542,54,0	1/1:3,9:12:30.05:304,30,0	1/1:7,10:17:39.02:390,39,0	1/1:9,11:20:39:385,39,0	1/1:8,6:15:32.46:257,32,0	1/1:12,13:26:65.90:641,66,0	1/1:6,7:13:21.01:213,21,0	1/1:0,4:4:12.03:122,12,0	1/1:8,5:13:20.98:213,21,0	1/1:8,20:29:75.52:734,76,0	1/1:7,5:9:8.98:91,9,0	1/1:6,8:14:33.04:329,33,0	1/1:6,8:14:35.91:350,36,0	1/1:3,11:14:20.08:208,20,0	1/1:3,13:16:42.03:426,42,0	1/1:8,9:17:33.04:335,33,0	1/1:10,16:26:60.05:605,60,0	1/1:0,5:5:9.02:92,9,0
chr10	32970549	.	TTTA	T	3159.27	PASS	AB=0.992;AC=29;AF=0.518;AN=56;BaseQRankSum=1.180;DP=520;FS=52.736;HRun=0;HaplotypeScore=175.5048;InbreedingCoeff=-0.4920;MQ=67.03;MQ0=10;MQRankSum=-3.389;QD=7.67;ReadPosRankSum=9.468;VQSLOD=0.8532;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:1.65:0,2,22	0/1:10,0:10:20.74:21,0,67	0/0:58,0:22:33.26:0,33,453	0/0:36,0:18:19.36:0,19,98	0/1:24,0:24:99:123,0,110	0/1:19,0:18:9.32:140,0,9	1/1:15,0:15:22.06:156,22,0	1/1:12,1:13:0.26:190,0,0	0/1:19,0:19:38.31:119,0,38	0/1:17,0:17:48.17:146,0,48	0/1:28,0:28:83.88:210,0,84	0/1:13,0:13:20.11:112,0,20	0/1:17,1:18:28.45:165,0,28	0/1:18,1:19:27.74:137,0,28	0/1:17,0:17:33.17:119,0,33	0/1:26,0:26:3.38:241,0,3	0/1:12,0:12:32.76:67,0,33	1/1:4,0:4:10.98:48,11,0	0/1:12,0:12:41.17:79,0,41	0/1:31,0:31:9.40:273,0,9	0/1:8,0:5:15.46:38,0,15	0/1:12,1:13:2.20:150,0,2	0/1:17,0:17:50.18:161,0,50	0/1:14,0:14:8.83:104,0,9	1/1:16,0:16:10.19:147,10,0	0/1:16,0:16:47.89:98,0,48	0/1:25,0:25:22.86:248,0,23	0/1:6,0:6:5.47:24,0,5
chr10	32970550	.	TTA	T	2116.24	PASS	AB=0.998;AC=30;AF=0.536;AN=56;BaseQRankSum=-0.376;DP=517;FS=61.851;HRun=0;HaplotypeScore=172.0666;InbreedingCoeff=-0.4799;MQ=67.07;MQ0=10;MQRankSum=-3.337;QD=5.00;ReadPosRankSum=10.628;VQSLOD=0.1199;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,8:14:37.65:329,38,0	0/1:10,0:10:18.52:19,0,62	0/0:58,0:22:37.63:0,38,345	0/0:36,0:18:10.89:0,11,128	0/1:24,1:25:86.83:87,0,106	0/1:19,0:18:28.92:81,0,29	1/1:14,0:14:18.25:112,18,0	0/1:12,0:12:3.13:101,0,3	0/1:18,0:18:35.78:76,0,36	0/1:17,0:17:5.93:80,0,6	0/1:28,0:28:78.51:133,0,79	0/1:13,0:13:17.30:79,0,17	0/1:18,0:18:22.54:67,0,23	0/1:17,0:17:21.64:103,0,22	0/1:17,0:17:11.28:11,0,44	0/1:26,0:26:1.99:135,0,2	0/1:12,0:12:38.51:39,0,39	1/1:4,0:4:10.14:39,10,0	0/1:12,0:12:35.42:41,0,35	0/1:32,0:32:17.83:182,0,18	0/1:8,0:5:15.80:20,0,16	0/1:13,0:13:0.90:77,0,1	0/1:17,0:17:41.29:65,0,41	0/1:14,0:14:8.96:49,0,9	1/1:16,0:16:10.89:119,11,0	0/1:16,0:16:40.98:70,0,41	0/1:25,0:25:18.48:142,0,18	0/1:6,0:6:5.91:20,0,6
chr10	32970560	.	A	AGGG	19848.52	PASS	AB=0.976;AC=53;AF=0.946;AN=56;BaseQRankSum=-2.807;DP=555;FS=4.658;HRun=5;HaplotypeScore=137.5022;InbreedingCoeff=0.6934;MQ=72.48;MQ0=10;MQRankSum=-5.828;QD=40.26;ReadPosRankSum=5.022;VQSLOD=3.0505;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:9,0:14:25.36:390,25,0	1/1:5,10:15:33.07:640,33,0	0/0:60,0:27:42.38:0,42,619	0/1:40,0:23:6.14:6,0,323	1/1:4,22:31:66.18:1275,66,0	1/1:3,17:20:45.15:947,45,0	1/1:3,11:14:33.08:659,33,0	1/1:14,6:24:60:932,60,0	1/1:4,14:18:42.14:881,42,0	1/1:6,10:18:38.16:718,38,0	1/1:5,23:29:72.25:1489,72,0	1/1:4,8:12:27.09:551,27,0	1/1:7,9:16:27.09:552,27,0	1/1:4,15:20:39.13:818,39,0	1/1:2,0:14:30.54:496,31,0	1/1:7,15:22:54.19:1129,54,0	1/1:2,10:12:30.10:632,30,0	1/1:0,4:4:12.04:256,12,0	1/1:2,11:16:42.11:804,42,0	1/1:9,22:34:74.76:1492,75,0	1/1:3,7:7:15.01:267,15,0	1/1:5,11:17:27.09:550,27,0	1/1:4,12:16:33.11:678,33,0	1/1:6,9:15:27.09:504,27,0	1/1:0,16:17:45.15:954,45,0	1/1:4,10:14:30.10:640,30,0	1/1:2,21:23:63.22:1332,63,0	1/1:2,4:6:12.04:255,12,0
chr10	32970653	.	AG	A	931.49	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.459;DP=608;FS=0.742;HRun=1;HaplotypeScore=70.8349;InbreedingCoeff=0.9818;MQ=72.66;MQ0=0;MQRankSum=-1.686;QD=32.12;ReadPosRankSum=0.415;VQSLOD=3.2917;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,29:29:75.21:1026,75,0	0/0:17,0:17:45.15:0,45,714	0/0:11,0:11:33.06:0,33,477	0/0:13,0:13:27.10:0,27,394	0/0:36,0:36:93.32:0,93,1482	0/0:20,0:20:57.19:0,57,900	0/0:14,0:14:39.12:0,39,588	0/0:28,0:28:78.22:0,78,1217	0/0:23,0:23:66.22:0,66,1043	0/0:25,0:25:75.24:0,75,1157	0/0:28,0:28:84.26:0,84,1292	0/0:23,0:23:66.20:0,66,1008	0/0:30,0:30:90.22:0,90,1336	0/0:28,0:28:78.27:0,78,1243	0/0:25,0:25:72.23:0,72,1110	0/0:25,0:25:72.23:0,72,1127	0/0:9,0:9:27.09:0,27,430	0/0:11,0:11:33.11:0,33,527	0/0:24,0:24:72.25:0,72,1144	0/0:32,0:32:93.29:0,93,1440	0/0:15,0:15:42.14:0,42,671	0/0:25,0:25:66.23:0,66,1055	0/0:25,0:25:63.21:0,63,1007	0/0:14,0:14:36.12:0,36,570	0/0:16,0:16:45.14:0,45,688	0/0:27,1:28:42.32:0,42,1253	0/0:29,0:29:84.27:0,84,1308	0/0:5,0:5:15.05:0,15,240
chr10	32970952	.	G	GA	17982.40	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-9.268;DP=638;FS=3.301;HRun=6;HaplotypeScore=55.0392;InbreedingCoeff=0.9883;MQ=88.34;MQ0=0;MQRankSum=-5.035;QD=31.94;ReadPosRankSum=3.081;VQSLOD=5.3509;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:72.15:0,72,733	1/1:5,14:19:36.11:450,36,0	0/0:26,0:26:44.81:0,45,439	0/0:21,0:21:42.08:0,42,421	1/1:2,35:37:99:1257,102,0	1/1:3,22:25:60.19:755,60,0	1/1:1,21:22:57.18:717,57,0	1/1:1,22:23:66.20:818,66,0	1/1:2,20:22:54.17:679,54,0	1/1:5,24:29:72.21:891,72,0	1/1:1,22:23:63.20:793,63,0	1/1:2,23:25:63.20:793,63,0	1/1:7,18:25:48.14:590,48,0	1/1:2,17:20:51.16:640,51,0	1/1:2,29:31:75.24:943,75,0	1/1:4,18:22:51.16:642,51,0	1/1:0,16:16:42.13:528,42,0	1/1:2,8:10:24.08:302,24,0	1/1:1,17:18:48.12:586,48,0	1/1:2,24:26:69.22:868,69,0	1/1:2,16:18:42.13:528,42,0	1/1:5,24:29:75.24:941,75,0	1/1:1,28:29:78.25:981,78,0	1/1:0,13:13:39.12:491,39,0	1/1:0,23:23:63.20:792,63,0	1/1:1,19:20:54.17:678,54,0	1/1:2,31:34:93.30:1169,93,0	1/1:0,4:4:12.04:151,12,0
chr10	32974166	.	GACACACAC	G	7222.44	PASS	AB=0.727;AC=47;AF=0.940;AN=50;BaseQRankSum=2.402;DP=331;FS=0.000;HRun=0;HaplotypeScore=82.3863;InbreedingCoeff=0.2570;MQ=48.48;MQ0=12;MQRankSum=0.320;QD=26.17;ReadPosRankSum=1.148;VQSLOD=4.1643;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:14:6.02:112,6,0	1/1:2,3:5:9.03:227,9,0	./.	0/0:27,0:8:3.01:0,3,124	1/1:10,4:14:14.96:320,15,0	1/1:5,7:12:21.07:511,21,0	1/1:4,2:6:3.01:76,3,0	1/1:18,3:21:9:152,9,0	./.	1/1:5,5:10:15.04:328,15,0	1/1:9,8:18:24.08:586,24,0	1/1:1,5:6:15.05:379,15,0	1/1:3,1:4:3.01:76,3,0	1/1:3,4:7:12.04:303,12,0	1/1:7,4:12:15.05:359,15,0	1/1:3,6:9:12.04:303,12,0	0/1:5,3:8:57.83:143,0,58	1/1:10,3:11:3.01:76,3,0	1/1:13,3:15:12.04:283,12,0	1/1:9,8:17:18.06:455,18,0	1/1:11,0:9:0.89:2,1,0	1/1:1,7:9:21.07:511,21,0	1/1:5,8:13:15.05:379,15,0	./.	1/1:4,7:12:17.95:395,18,0	1/1:5,6:13:21.07:489,21,0	1/1:9,9:18:24.08:607,24,0	1/1:2,2:4:6.02:152,6,0
chr10	32975346	.	T	TGATA	10902.06	PASS	AB=0.607;AC=49;AF=0.980;AN=50;BaseQRankSum=-1.051;DP=479;FS=0.000;HRun=0;HaplotypeScore=92.4699;InbreedingCoeff=-0.0337;MQ=58.64;MQ0=6;MQRankSum=0.511;QD=24.17;ReadPosRankSum=0.130;VQSLOD=4.5762;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:24:11.43:99,11,0	1/1:5,8:13:24.08:566,24,0	./.	./.	1/1:13,0:26:18.06:312,18,0	1/1:8,0:16:18.06:313,18,0	1/1:4,0:9:3.01:52,3,0	1/1:37,0:37:21:300,21,0	1/1:7,0:12:9.03:156,9,0	1/1:14,10:24:27.09:637,27,0	1/1:13,13:28:39.13:917,39,0	1/1:5,10:15:18.06:424,18,0	1/1:17,0:19:17.90:220,18,0	1/1:5,10:15:18.06:424,18,0	1/1:8,13:21:30.10:707,30,0	1/1:5,1:12:12.04:208,12,0	1/1:10,0:10:11.99:140,12,0	./.	1/1:7,9:14:24.08:544,24,0	1/1:9,21:32:54.19:1271,54,0	1/1:5,3:10:9.03:212,9,0	1/1:2,2:4:3.01:71,3,0	0/1:6,10:17:16.61:606,0,17	1/1:6,0:6:2.84:14,3,0	1/1:14,15:28:33.11:778,33,0	1/1:7,16:24:48.16:1082,48,0	1/1:17,4:22:15.05:353,15,0	1/1:0,8:9:21.07:495,21,0
chr10	32975520	.	CT	C	7636.14	PASS	AB=0.919;AC=54;AF=0.964;AN=56;BaseQRankSum=-3.920;DP=456;FS=15.512;HRun=10;HaplotypeScore=58.9710;InbreedingCoeff=0.3963;MQ=70.06;MQ0=3;MQRankSum=0.224;QD=16.75;ReadPosRankSum=5.180;VQSLOD=3.8674;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,17:21:19.60:224,20,0	1/1:1,6:7:17.98:156,18,0	0/1:21,0:17:1.61:2,0,249	0/1:25,2:15:7.16:7,0,210	1/1:4,16:19:47.99:417,48,0	1/1:1,16:17:38.99:339,39,0	1/1:3,15:18:16.37:290,16,0	1/1:7,27:34:77.91:665,78,0	1/1:3,14:18:32.02:266,32,0	1/1:1,11:12:32.98:286,33,0	1/1:2,21:23:53.98:469,54,0	1/1:0,14:14:35.99:313,36,0	1/1:1,16:17:35.99:312,36,0	1/1:4,11:15:26.98:234,27,0	1/1:3,16:19:35.96:313,36,0	1/1:1,8:9:20.99:182,21,0	1/1:2,9:12:26.03:214,26,0	1/1:0,8:7:21:182,21,0	1/1:0,10:10:26.98:234,27,0	1/1:2,19:22:59.02:501,59,0	1/1:2,10:12:23.98:208,24,0	1/1:1,7:8:20.99:182,21,0	1/1:0,10:10:23.99:208,24,0	1/1:2,9:11:23.98:208,24,0	1/1:2,13:15:29.99:260,30,0	1/1:6,11:17:32.99:287,33,0	1/1:6,22:28:59.96:519,60,0	1/1:0,7:7:18:156,18,0
chr10	32975540	.	CCTCTCTCT	C	1053.58	PASS	AB=0.984;AC=19;AF=0.633;AN=30;BaseQRankSum=1.079;DP=502;FS=0.000;HRun=0;HaplotypeScore=141.4537;InbreedingCoeff=0.2562;MQ=63.27;MQ0=25;MQRankSum=-1.466;QD=5.55;ReadPosRankSum=-1.245;VQSLOD=2.3945;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:19:0.89:2,1,0	0/0:8,0:8:0.89:0,1,2	./.	./.	./.	./.	1/1:20,1:21:9.03:143,9,0	./.	0/1:18,0:16:28.37:113,0,28	0/0:15,0:15:0.47:0,0,1	0/1:23,0:23:0:0,0,0	0/0:17,0:18:5.59:0,6,34	./.	1/1:15,1:16:9.03:218,9,0	0/1:19,1:20:60.01:65,0,60	1/1:9,2:12:6.02:130,6,0	./.	0/0:8,0:8:3.01:0,3,59	1/1:11,0:11:3.01:54,3,0	./.	./.	./.	1/1:13,0:13:0.47:1,0,0	./.	1/1:14,0:15:4.26:59,4,0	./.	1/1:17,4:21:15.05:369,15,0	./.
chr10	32977029	.	TA	T	2790.99	PASS	AB=0.801;AC=46;AF=0.885;AN=52;BaseQRankSum=-3.446;DP=204;FS=41.737;HRun=11;HaplotypeScore=41.6068;InbreedingCoeff=0.3395;MQ=47.73;MQ0=4;MQRankSum=-1.041;QD=15.68;ReadPosRankSum=3.410;VQSLOD=1.5124;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:13:5.30:0,5,147	1/1:3,4:7:17.97:147,18,0	./.	0/0:7,0:3:5.86:0,6,35	1/1:5,5:10:8.96:74,9,0	1/1:4,1:4:11.98:98,12,0	./.	1/1:4,5:10:23.18:178,23,0	1/1:1,4:5:8.97:71,9,0	1/1:4,3:8:20.96:170,21,0	1/1:6,0:6:8.87:71,9,0	1/1:3,3:6:11.86:85,12,0	1/1:6,1:7:17.89:140,18,0	0/1:4,1:5:18.57:19,0,26	0/1:7,3:10:13.56:100,0,14	1/1:8,1:9:22.99:175,23,0	1/1:4,2:6:14.96:121,15,0	1/1:7,3:10:2.62:103,3,0	1/1:7,6:12:35.91:288,36,0	1/1:3,4:7:11.95:94,12,0	1/1:5,0:5:3.01:43,3,0	1/1:3,0:3:2.98:24,3,0	1/1:4,1:5:14.97:119,15,0	1/1:2,3:5:14.92:116,15,0	1/1:4,2:6:14.94:119,15,0	1/1:5,2:7:11.96:99,12,0	1/1:11,3:14:32.37:244,32,0	1/1:8,1:9:26.94:218,27,0
chr10	32977042	.	T	TA	3189.18	PASS	AB=0.831;AC=46;AF=0.852;AN=54;BaseQRankSum=-2.154;DP=223;FS=13.239;HRun=11;HaplotypeScore=41.1990;InbreedingCoeff=0.1978;MQ=55.56;MQ0=4;MQRankSum=-0.782;QD=15.56;ReadPosRankSum=0.941;VQSLOD=2.7136;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:9,0:12:13.76:65,14,0	0/1:7,0:7:2.70:52,0,3	0/0:11,0:2:4.76:0,5,22	0/0:7,0:3:4.39:0,4,43	0/1:5,3:8:11.21:79,0,11	1/1:5,0:5:8.13:104,8,0	./.	0/1:10,4:14:19.46:174,0,19	1/1:3,5:8:12.02:119,12,0	1/1:7,3:10:18.04:182,18,0	1/1:6,2:8:17.95:166,18,0	1/1:2,3:6:14.84:123,15,0	1/1:8,0:8:18.49:176,18,0	1/1:5,1:6:8.77:63,9,0	0/1:7,2:9:11.17:75,0,11	1/1:8,1:10:23.79:204,24,0	1/1:5,1:6:12.02:120,12,0	1/1:7,3:10:6.72:220,7,0	1/1:13,4:16:6.82:248,7,0	1/1:4,1:6:6.01:56,6,0	1/1:4,1:5:12.02:115,12,0	1/1:1,0:1:3.01:30,3,0	1/1:4,1:5:11.97:110,12,0	1/1:4,1:5:9:85,9,0	1/1:5,3:8:18.03:179,18,0	1/1:6,1:7:9.02:92,9,0	1/1:10,3:13:9.70:262,10,0	1/1:9,0:9:7.57:221,8,0
chr10	32979517	.	G	GA	435.63	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-3.839;DP=570;FS=3.440;HRun=7;HaplotypeScore=53.9276;InbreedingCoeff=0.7745;MQ=75.24;MQ0=0;MQRankSum=-0.493;QD=29.04;ReadPosRankSum=-0.529;VQSLOD=4.0489;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,14:15:45.12:530,45,0	0/0:6,0:6:15.02:0,15,145	0/0:21,0:21:35.44:0,35,337	0/0:9,0:9:0.06:0,0,153	0/0:30,0:30:81.11:0,81,776	0/0:27,0:27:78.13:0,78,753	0/0:12,0:12:33.05:0,33,319	0/0:31,0:32:89.32:0,89,830	0/0:21,0:21:57.08:0,57,550	0/0:29,0:29:87.12:0,87,830	0/0:30,0:30:87.14:0,87,840	0/0:22,0:22:54.08:0,54,521	0/0:29,0:29:75.10:0,75,724	0/0:18,0:18:54.07:0,54,516	0/0:22,0:22:63.10:0,63,608	0/0:15,0:15:39.05:0,39,373	0/0:15,0:15:39.04:0,39,371	0/0:19,0:19:48.07:0,48,463	0/0:27,0:27:60.08:0,60,575	0/0:23,0:23:60.07:0,60,574	0/0:9,0:9:24.04:0,24,232	0/0:22,0:22:57.06:0,57,539	0/0:21,0:21:57.09:0,57,550	0/0:13,0:13:30.04:0,30,290	0/0:20,0:20:60.10:0,60,579	0/0:32,0:32:81.11:0,81,777	0/0:25,0:25:60.07:0,60,573	0/0:6,0:6:18.03:0,18,174
chr10	32980627	.	T	TCAAACACACACACACA	5009.45	PASS	AB=1.000;AC=27;AF=0.482;AN=56;BaseQRankSum=1.788;DP=486;FS=5.817;HRun=0;HaplotypeScore=214.7275;InbreedingCoeff=-0.3839;MQ=67.49;MQ0=4;MQRankSum=-3.778;QD=13.54;ReadPosRankSum=-3.394;VQSLOD=2.7358;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:28:7.05:7,0,39	0/1:7,0:7:15.05:164,0,15	0/0:27,0:12:5.17:0,5,86	0/0:25,0:15:4.20:0,4,43	0/1:37,0:37:28.61:77,0,29	0/1:16,0:16:40.90:148,0,41	0/1:22,0:21:43.98:123,0,44	0/1:28,0:28:76.42:477,0,76	1/1:12,0:12:4.70:352,5,0	0/1:9,0:9:65.55:362,0,66	1/1:10,0:10:6.02:364,6,0	0/1:18,0:17:14.96:53,0,15	1/1:18,0:18:5.98:113,6,0	0/1:12,0:12:18.71:152,0,19	0/1:23,0:23:15.42:306,0,15	1/1:11,0:11:3.01:209,3,0	0/1:23,0:23:58.74:659,0,59	0/1:13,0:13:12.92:317,0,13	0/1:14,0:14:37.84:285,0,38	0/1:12,0:12:18.94:205,0,19	0/0:16,0:15:8.72:0,9,73	0/0:16,0:15:7.33:0,7,53	0/0:11,0:11:0.47:0,0,1	0/1:18,0:18:31.26:31,0,61	0/0:11,7:21:4.35:0,4,26	0/1:14,0:14:61.82:288,0,62	0/1:14,0:14:33.89:161,0,34	1/1:11,0:11:3.01:157,3,0
chr10	32980658	.	CGTAT	C	977.84	PASS	AB=0.894;AC=12;AF=0.214;AN=56;BaseQRankSum=6.391;DP=569;FS=16.045;HRun=0;HaplotypeScore=130.4426;InbreedingCoeff=-0.2958;MQ=46.24;MQ0=15;MQRankSum=-3.170;QD=3.64;ReadPosRankSum=-1.902;VQSLOD=1.1872;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:29,3:37:6.02:6,0,117	0/0:12,0:12:14.67:0,15,358	0/0:36,0:13:35.42:0,35,759	0/0:23,1:8:20.91:0,21,428	0/1:33,1:34:99:124,0,558	0/0:11,1:10:21.07:0,21,479	0/1:11,10:20:99:135,0,412	0/1:23,14:35:99:517,0,1101	0/0:12,4:16:14.27:0,14,285	0/0:15,0:15:0.93:0,1,624	0/0:25,0:24:33.11:0,33,716	0/1:16,1:16:46.07:46,0,269	0/0:15,7:22:32.85:0,33,784	0/0:16,4:20:29.76:0,30,683	0/0:12,6:18:11.04:0,11,249	0/0:16,1:17:14.88:0,15,358	0/1:16,7:24:64.19:64,0,692	0/1:15,1:16:58.70:59,0,232	0/1:14,1:12:32.58:33,0,598	0/0:17,0:17:27.09:0,27,640	0/0:9,3:9:3.01:0,3,87	0/1:17,0:16:13.09:13,0,219	0/0:12,2:14:9.03:0,9,221	0/0:8,4:13:5.81:0,6,146	0/0:25,1:27:33.11:0,33,847	0/1:24,0:24:63.08:63,0,1246	0/1:15,0:15:57.53:58,0,383	0/1:11,0:11:4.49:4,0,259
chr10	32980662	.	T	TAC	308.96	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=5.848;DP=597;FS=6.645;HRun=0;HaplotypeScore=126.7407;InbreedingCoeff=0.3952;MQ=45.80;MQ0=15;MQRankSum=-2.887;QD=5.83;ReadPosRankSum=-0.659;VQSLOD=2.5345;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:14,24:38:19.20:394,19,0	0/0:12,0:12:14.92:0,15,184	0/0:40,0:16:39.12:0,39,484	0/0:24,0:7:15.05:0,15,191	0/0:33,0:33:26.57:0,27,315	0/0:11,0:9:21.07:0,21,264	0/0:21,0:20:17.89:0,18,228	0/0:39,0:37:21.84:0,22,582	0/0:16,0:16:15.16:0,15,167	0/0:19,0:19:0.82:0,1,314	0/0:25,0:24:17.16:0,17,362	0/0:18,0:17:11.98:0,12,133	0/0:23,0:23:36.10:0,36,439	0/0:19,0:19:27:0,27,343	0/0:18,0:18:9.03:0,9,114	0/0:18,0:18:18.04:0,18,216	0/0:24,0:24:35.02:0,35,413	0/0:18,0:17:16.76:0,17,192	0/0:17,0:14:13.85:0,14,343	0/0:19,0:19:33.07:0,33,391	0/0:14,0:11:5.54:0,6,62	0/0:16,0:15:8.88:0,9,114	0/0:14,0:14:8.95:0,9,114	0/0:13,0:13:6.02:0,6,76	0/0:27,0:27:32.99:0,33,420	0/0:24,0:24:55.97:0,56,678	0/1:15,0:15:16.37:16,0,219	0/0:22,0:22:30.34:0,30,348
chr10	32980984	.	T	TC	1423.58	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.307;DP=613;FS=0.000;HRun=4;HaplotypeScore=66.5058;InbreedingCoeff=0.9575;MQ=93.87;MQ0=0;MQRankSum=-3.802;QD=27.91;ReadPosRankSum=-0.180;VQSLOD=2.6698;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,47:51:99:1518,111,0	0/0:6,0:6:18.05:0,18,204	0/0:29,0:29:78.05:0,78,836	0/0:32,0:32:61.63:0,62,790	0/0:26,0:26:72.21:0,72,816	0/0:18,0:18:20.71:0,21,420	0/0:31,0:31:90.26:0,90,1021	0/0:26,0:27:66.19:0,66,748	0/0:12,0:12:30.07:0,30,331	0/0:21,0:21:54.14:0,54,603	0/0:14,0:14:36.10:0,36,408	0/0:24,0:24:66.19:0,66,748	0/0:21,0:21:60.17:0,60,680	0/0:21,0:21:57.15:0,57,637	0/0:25,0:25:75.21:0,75,851	0/0:23,0:23:66.19:0,66,749	0/0:33,0:33:90.25:0,90,1020	0/0:11,0:12:34.91:0,35,379	0/0:15,0:15:33.09:0,33,369	0/0:19,0:19:48.11:0,48,525	0/0:28,0:28:75.21:0,75,850	0/0:11,0:11:33.09:0,33,374	0/0:6,0:6:12.03:0,12,136	0/0:21,0:21:54.15:0,54,612	0/0:22,0:21:66.19:0,66,748	0/0:16,0:16:45.13:0,45,510	0/0:31,0:31:90.24:0,90,1008	0/0:18,0:18:54.15:0,54,612
chr10	32983045	.	G	GT	546.46	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-3.669;DP=614;FS=1.922;HRun=6;HaplotypeScore=57.2339;InbreedingCoeff=0.9588;MQ=74.84;MQ0=0;MQRankSum=-2.963;QD=32.14;ReadPosRankSum=2.114;VQSLOD=4.1373;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,17:17:51.16:641,51,0	0/0:7,0:7:15.03:0,15,153	0/0:14,0:14:13.36:0,13,227	0/0:19,0:18:22.52:0,23,312	0/0:31,0:31:87.16:0,87,874	0/0:29,0:29:84.17:0,84,847	0/0:26,0:26:63.07:0,63,616	0/0:28,0:28:72.16:0,72,735	0/0:27,0:27:69.14:0,69,696	0/0:25,0:25:66.11:0,66,662	0/0:27,0:27:78.17:0,78,791	0/0:16,0:16:45.08:0,45,451	0/0:34,0:34:78.14:0,78,788	0/0:11,0:11:33.08:0,33,337	0/0:19,0:19:57.12:0,57,575	0/0:12,0:12:36.07:0,36,363	0/0:20,0:20:57.10:0,57,573	0/0:17,0:17:42.03:0,42,409	0/0:22,0:22:60.13:0,60,606	0/0:30,0:30:84.16:0,84,844	0/0:14,0:14:36.08:0,36,367	0/0:12,0:12:33.04:0,33,327	0/0:31,0:31:90.19:0,90,911	0/0:19,0:19:54.12:0,54,551	0/0:33,0:33:92.90:0,93,913	0/0:29,0:29:72.12:0,72,716	0/0:35,0:35:99:0,99,1002	0/0:10,0:10:30.07:0,30,306
chr10	32983540	.	G	GAA	1147.86	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-6.097;DP=687;FS=1.713;HRun=4;HaplotypeScore=91.1226;InbreedingCoeff=0.9940;MQ=83.63;MQ0=0;MQRankSum=-4.081;QD=47.83;ReadPosRankSum=0.718;VQSLOD=2.3358;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,24:24:69.24:1243,69,0	0/0:9,0:9:24.08:0,24,319	0/0:23,0:23:60.17:0,60,779	0/0:21,0:21:54.18:0,54,712	0/0:39,0:39:99:0,117,1561	0/0:27,0:27:72.24:0,72,961	0/0:22,0:22:66.19:0,66,849	0/0:25,0:25:72.24:0,72,961	0/0:26,0:26:78.26:0,78,1040	0/0:30,0:30:81.26:0,81,1068	0/0:25,0:25:66.21:0,66,880	0/0:31,0:31:93.29:0,93,1226	0/0:28,0:28:81.25:0,81,1064	0/0:31,0:31:81.26:0,81,1081	0/0:21,0:21:57.18:0,57,760	0/0:28,0:28:81.27:0,81,1081	0/0:22,0:22:63.21:0,63,841	0/0:25,0:25:75.25:0,75,1001	0/0:24,0:24:63.16:0,63,807	0/0:30,0:30:90.30:0,90,1200	0/0:29,0:29:75.24:0,75,1000	0/0:15,0:15:42.14:0,42,560	0/0:22,0:22:54.16:0,54,705	0/0:25,0:25:69.18:0,69,900	0/0:22,0:22:60.16:0,60,769	0/0:22,0:22:66.22:0,66,880	0/0:34,0:34:99:0,99,1289	0/0:7,0:7:21.07:0,21,280
chr10	32985531	.	T	TAA	9634.81	PASS	AB=0.889;AC=51;AF=0.911;AN=56;BaseQRankSum=-3.611;DP=484;FS=2.922;HRun=12;HaplotypeScore=109.7090;InbreedingCoeff=0.6782;MQ=65.93;MQ0=0;MQRankSum=-2.104;QD=21.27;ReadPosRankSum=-1.005;VQSLOD=4.1219;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:21:41.34:0,41,352	1/1:1,5:8:23.05:265,23,0	0/1:7,0:8:18.04:18,0,40	0/0:9,0:10:14.56:0,15,103	1/1:7,17:30:50.56:614,51,0	1/1:4,10:16:32.08:391,32,0	1/1:5,15:21:41.61:538,42,0	1/1:5,11:21:42.56:462,43,0	1/1:4,10:14:23.99:293,24,0	1/1:6,9:17:39:458,39,0	1/1:9,10:20:33.54:431,34,0	1/1:6,7:15:20.50:235,21,0	1/1:9,9:18:5.76:347,6,0	1/1:4,6:11:21.54:282,22,0	1/1:5,16:23:36.09:444,36,0	1/1:2,14:17:36.12:491,36,0	1/1:2,14:16:24.08:337,24,0	1/1:4,5:9:18.92:235,19,0	1/1:8,7:17:29.57:369,30,0	1/1:8,16:26:55.08:605,55,0	1/1:3,8:11:12.04:169,12,0	1/1:5,15:21:43.13:475,43,0	1/1:9,9:20:29.69:281,30,0	1/1:5,15:21:41.89:467,42,0	1/1:4,18:27:47.76:516,48,0	1/1:8,8:19:35.70:423,36,0	1/1:7,7:16:4.21:250,4,0	1/1:1,9:11:20.51:239,21,0
chr10	32985602	.	C	CCAAGACAGCAAAGTGTGAAGAAC	1307.46	PASS	AB=0.653;AC=12;AF=0.857;AN=14;BaseQRankSum=-1.182;DP=18;FS=7.404;HRun=0;HaplotypeScore=38.1740;MQ=157.46;MQ0=0;MQRankSum=-0.967;QD=87.16;ReadPosRankSum=0.107;VQSLOD=1.7427;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/1:1,1:5:11.58:876,0,12	0/1:2,0:3:15.76:267,0,16	./.	./.	./.	1/1:1,0:1:3.01:52,3,0	./.	./.	./.	./.	./.	./.	./.	1/1:2,0:2:3:25,3,0	./.	./.	./.	./.	./.	1/1:1,0:1:3.01:50,3,0	1/1:2,0:2:0.89:2,1,0	./.	./.	1/1:1,0:1:3.01:111,3,0	./.	./.
chr10	32986501	.	GA	G	11733.91	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=0.232;DP=531;FS=1.725;HRun=9;HaplotypeScore=102.4023;InbreedingCoeff=0.9887;MQ=72.87;MQ0=0;MQRankSum=-2.101;QD=23.47;ReadPosRankSum=2.928;VQSLOD=4.9837;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:28.33:0,28,315	1/1:0,8:8:24.01:220,24,0	0/0:10,0:10:20.65:0,21,217	0/0:9,1:10:16.71:0,17,133	1/1:3,28:31:81.04:741,81,0	1/1:1,22:23:56.89:522,57,0	1/1:1,11:12:27.01:247,27,0	1/1:3,23:26:69.03:631,69,0	1/1:0,15:15:39.02:357,39,0	1/1:2,26:29:80.08:720,80,0	1/1:2,23:25:69.04:631,69,0	1/1:2,9:11:27.01:247,27,0	1/1:1,22:23:44.21:555,44,0	1/1:0,13:13:39.02:357,39,0	1/1:5,19:24:57.03:522,57,0	1/1:0,10:10:30.02:275,30,0	1/1:1,17:18:48.03:439,48,0	1/1:0,6:6:18.01:164,18,0	1/1:2,15:17:45.02:412,45,0	1/1:6,40:46:99:988,108,0	1/1:0,11:11:24.01:220,24,0	1/1:5,14:19:42.02:384,42,0	1/1:2,22:24:60.03:549,60,0	1/1:1,11:12:30.02:275,30,0	1/1:4,19:23:54.03:494,54,0	1/1:0,25:25:75.04:687,75,0	1/1:5,24:29:63.03:576,63,0	1/1:1,19:20:57.02:522,57,0
chr10	32987369	.	TC	T	8333.09	PASS	AB=1.000;AC=51;AF=0.911;AN=56;BaseQRankSum=-3.077;DP=481;FS=4.022;HRun=9;HaplotypeScore=122.2391;InbreedingCoeff=0.6159;MQ=69.85;MQ0=0;MQRankSum=0.520;QD=18.68;ReadPosRankSum=1.956;VQSLOD=3.9794;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:6.94:0,7,117	1/1:0,4:4:12.01:110,12,0	0/1:7,0:7:16.23:16,0,46	0/0:12,0:13:7.23:0,7,59	1/1:2,15:17:35.92:318,36,0	1/1:2,22:23:48.01:439,48,0	1/1:4,17:20:38.97:349,39,0	1/1:5,17:22:44.95:403,45,0	1/1:1,9:10:24:220,24,0	1/1:1,18:19:50.93:446,51,0	1/1:4,10:14:30.01:274,30,0	1/1:0,23:23:47.96:431,48,0	1/1:3,7:10:24.01:219,24,0	1/1:5,20:25:35.99:329,36,0	1/1:4,9:13:26.77:242,27,0	1/1:4,14:18:44.60:395,45,0	1/1:2,21:23:54:488,54,0	1/1:2,11:13:33.01:302,33,0	1/1:12,8:19:25.41:267,25,0	1/1:6,14:20:32.87:301,33,0	1/1:4,18:22:38.99:350,39,0	1/1:1,13:14:36.02:330,36,0	1/1:2,15:17:36.01:329,36,0	1/1:3,10:13:16.72:157,17,0	1/1:5,16:21:41.09:374,41,0	1/1:2,26:29:80.08:719,80,0	1/1:5,12:17:36.01:329,36,0	1/1:2,7:9:1.54:194,2,0
chr10	32987399	.	G	GCA	3656.57	PASS	AB=0.858;AC=38;AF=0.731;AN=52;BaseQRankSum=-2.106;DP=546;FS=2.470;HRun=0;HaplotypeScore=222.9657;InbreedingCoeff=-0.1073;MQ=43.43;MQ0=4;MQRankSum=-2.704;QD=7.11;ReadPosRankSum=0.772;VQSLOD=2.9193;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:18:14.13:0,14,80	0/1:7,0:7:9.57:15,0,10	./.	./.	1/1:23,4:27:8.87:70,9,0	1/1:25,1:25:9:88,9,0	0/1:23,7:29:2.56:194,0,3	0/1:29,0:26:11.86:100,0,12	1/1:14,2:16:9:114,9,0	1/1:17,4:20:10.63:312,11,0	0/1:10,1:10:0:0,0,0	0/1:21,8:29:20.13:282,0,20	1/1:9,6:15:20.95:243,21,0	0/1:21,4:25:15.08:197,0,15	1/1:13,0:14:0.56:103,1,0	1/1:13,4:17:8.66:208,9,0	1/1:23,6:28:16.17:319,16,0	0/1:12,4:16:18.90:266,0,19	1/1:16,0:16:14.26:120,14,0	0/1:16,3:20:2.47:45,0,2	1/1:18,4:21:6.01:71,6,0	0/1:16,5:20:1.41:50,0,1	1/1:17,5:21:1.17:76,1,0	0/1:15,2:16:32.94:33,0,75	0/1:16,8:24:2.42:105,0,2	1/1:29,4:33:24.50:427,24,0	0/1:12,3:15:0.17:139,0,0	1/1:9,2:11:0.89:80,1,0
chr10	32987426	.	CAG	C	1112.69	PASS	AB=0.981;AC=24;AF=0.444;AN=54;BaseQRankSum=2.429;DP=593;FS=7.657;HRun=0;HaplotypeScore=258.6799;InbreedingCoeff=-0.2934;MQ=45.57;MQ0=10;MQRankSum=-4.504;QD=2.62;ReadPosRankSum=-2.985;VQSLOD=1.1016;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:19,0:19:13:18,0,13	0/1:8,0:8:9.78:10,0,39	0/0:21,0:12:34.97:0,35,258	0/0:36,0:15:13.34:0,13,149	1/1:34,0:34:0.14:1,0,0	0/1:22,0:21:21.29:30,0,21	0/1:35,0:34:36.68:37,0,44	1/1:29,0:25:7.09:126,7,0	0/1:13,0:13:30.54:31,0,34	0/1:27,0:26:52.21:168,0,52	./.	0/1:26,0:26:6.61:7,0,95	0/1:20,0:19:5.54:101,0,6	0/1:23,0:23:39.54:40,0,61	1/1:9,7:17:14.45:142,14,0	0/1:15,1:16:33.87:34,0,45	0/1:27,2:28:27.97:171,0,28	0/1:12,0:12:8.76:9,0,67	1/1:19,0:16:9.82:87,10,0	0/1:18,2:20:18.74:19,0,22	0/0:17,0:16:0.89:0,1,2	0/0:23,0:22:2.77:0,3,21	0/0:20,0:19:2.98:0,3,22	0/0:16,0:18:6.52:0,7,38	0/0:20,0:20:7.59:0,8,39	0/1:30,0:30:50.80:140,0,51	0/1:16,0:16:19.17:38,0,19	0/1:9,1:10:32.71:59,0,33
chr10	32987438	.	GAC	G	398.72	PASS	AB=0.951;AC=16;AF=0.296;AN=54;BaseQRankSum=1.756;DP=574;FS=3.145;HRun=0;HaplotypeScore=245.0233;InbreedingCoeff=-0.3011;MQ=48.09;MQ0=11;MQRankSum=-1.193;QD=1.51;ReadPosRankSum=-1.878;VQSLOD=2.4540;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:19:11.95:122,12,0	0/1:7,1:8:2.27:2,0,59	0/0:33,0:18:45.69:0,46,589	0/0:56,0:29:16.81:0,17,368	0/0:29,2:31:2.89:0,3,24	0/1:17,2:18:11.99:12,0,12	0/0:27,0:26:1.96:0,2,172	0/0:24,0:23:22.31:0,22,131	0/1:10,2:12:22.77:27,0,23	0/1:24,0:23:51.47:51,0,140	./.	0/1:22,2:24:25.05:25,0,218	0/1:20,1:20:8.75:35,0,9	0/0:17,2:19:2.80:0,3,129	0/1:17,0:17:14.83:39,0,15	0/1:15,0:15:6.26:6,0,73	0/1:24,3:27:90.81:91,0,91	0/1:12,0:12:19.14:19,0,190	0/1:19,0:16:1.21:1,0,118	0/0:16,0:16:3.01:0,3,46	0/0:15,0:14:2.99:0,3,24	0/0:21,0:20:2.96:0,3,46	0/0:14,0:13:3.01:0,3,37	0/0:14,1:15:2.69:0,3,16	0/0:17,1:18:8.43:0,8,69	0/1:20,0:20:57.33:57,0,156	0/1:14,2:16:40.89:41,0,43	0/1:11,0:11:9.18:9,0,56
chr10	32987452	.	CA	C	734.18	PASS	AB=0.862;AC=18;AF=0.321;AN=56;BaseQRankSum=2.130;DP=583;FS=1.465;HRun=2;HaplotypeScore=219.9652;InbreedingCoeff=-0.1080;MQ=51.88;MQ0=10;MQRankSum=-1.456;QD=2.87;ReadPosRankSum=-0.480;VQSLOD=-0.4046;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:8.44:0,8,135	0/1:4,3:7:37.15:58,0,37	0/0:46,0:28:78.14:0,78,1064	0/0:67,0:36:72.86:0,73,918	0/0:32,2:34:2.99:0,3,39	1/1:12,5:16:6.02:77,6,0	0/0:33,0:32:18.84:0,19,221	0/1:29,0:29:99:227,0,225	0/1:7,3:10:1.07:33,0,1	0/1:15,2:17:57.65:58,0,263	0/0:23,1:23:0:0,0,0	0/1:17,2:20:10.86:11,0,163	0/0:17,1:17:7.18:0,7,19	0/1:14,6:20:72.69:81,0,73	0/0:16,0:16:4.52:0,5,25	0/0:16,0:16:6.13:0,6,66	0/1:20,3:23:11.37:11,0,246	0/1:8,3:11:91.71:92,0,114	0/1:14,2:15:45.12:45,0,216	0/1:12,1:13:0.01:0,0,0	0/0:19,0:19:5.98:0,6,65	0/0:19,3:21:2.97:0,3,45	0/1:8,3:10:0:0,0,0	0/1:14,1:15:0.06:0,0,0	0/0:15,1:16:2.93:0,3,45	0/1:14,3:17:83.71:84,0,238	1/1:14,2:16:0.34:68,0,0	0/1:14,0:13:27.66:28,0,80
chr10	32987453	.	AAGACAGACAGAC	A	9568.10	PASS	AB=0.726;AC=48;AF=0.857;AN=56;BaseQRankSum=4.082;DP=582;FS=21.150;HRun=0;HaplotypeScore=242.9141;InbreedingCoeff=0.6606;MQ=52.05;MQ0=9;MQRankSum=-5.045;QD=21.12;ReadPosRankSum=-0.250;VQSLOD=2.4428;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:15:29.76:0,30,420	1/1:4,3:7:15.01:375,15,0	0/0:47,0:29:63.21:0,63,2147	0/0:67,0:36:51.12:0,51,2030	1/1:10,24:34:20.28:139,20,0	1/1:11,6:17:12.55:241,13,0	1/1:15,17:31:8.76:148,9,0	1/1:10,18:29:57.18:1266,57,0	1/1:5,4:10:11.83:336,12,0	1/1:12,5:17:30.10:947,30,0	1/1:5,19:23:11.53:79,12,0	1/1:12,7:20:17.59:292,18,0	1/1:4,13:17:19.50:653,20,0	1/1:13,8:21:35.86:685,36,0	1/1:6,10:16:8.35:147,8,0	1/1:5,11:16:8.52:234,9,0	1/1:13,4:21:29.62:486,30,0	1/1:9,2:11:14.11:448,14,0	0/1:12,4:15:52.45:536,0,52	1/1:4,9:13:17.66:119,18,0	1/1:5,13:19:2.70:20,3,0	1/1:15,6:21:13.02:98,13,0	1/1:10,1:10:8.07:59,8,0	0/1:7,8:15:0.16:0,0,0	1/1:8,6:15:17.49:119,17,0	1/1:13,6:19:39.13:1173,39,0	1/1:2,14:16:21.03:632,21,0	1/1:4,10:13:12.01:337,12,0
chr10	32987458	.	AGACAGAC	A	4546.58	PASS	AB=0.968;AC=36;AF=0.643;AN=56;BaseQRankSum=6.555;DP=578;FS=43.446;HRun=0;HaplotypeScore=228.9056;InbreedingCoeff=-0.0604;MQ=53.42;MQ0=9;MQRankSum=-4.392;QD=10.06;ReadPosRankSum=-1.842;VQSLOD=1.9617;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:32.74:0,33,512	0/1:6,1:7:20.91:188,0,21	0/0:42,0:27:76.14:0,76,2285	0/0:69,0:39:67.66:0,68,2058	0/1:30,2:32:1.27:116,0,1	1/1:17,2:18:13.04:149,13,0	0/1:30,0:29:70.66:71,0,84	0/1:29,0:29:99:474,0,301	1/1:7,2:9:12:161,12,0	0/1:19,1:20:99:399,0,210	1/1:23,1:23:11.78:80,12,0	0/1:20,1:21:44.70:162,0,45	1/1:16,1:17:17.10:298,17,0	1/1:21,2:23:3.11:331,3,0	1/1:15,0:15:8.68:87,9,0	1/1:16,0:16:8.78:116,9,0	0/1:18,2:20:99:229,0,141	0/1:11,0:11:89.94:168,0,90	0/1:17,0:16:99:215,0,212	1/1:13,0:13:17.69:119,18,0	0/1:19,0:19:14.28:14,0,32	0/1:22,0:21:21.18:82,0,21	1/1:9,0:9:8.64:60,9,0	0/1:11,1:12:0:0,0,0	1/1:12,1:13:17.80:120,18,0	0/1:24,0:24:96.69:459,0,97	1/1:14,2:16:21.03:300,21,0	0/1:14,0:13:23.72:148,0,24
chr10	32987465	.	C	CA	5542.90	PASS	AB=0.789;AC=49;AF=0.875;AN=56;BaseQRankSum=0.291;DP=560;FS=14.274;HRun=1;HaplotypeScore=208.3649;InbreedingCoeff=0.5487;MQ=61.73;MQ0=9;MQRankSum=-3.710;QD=12.77;ReadPosRankSum=-7.481;VQSLOD=0.5569;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:29.43:0,29,296	1/1:4,2:6:13.55:157,14,0	0/0:42,0:31:80.11:0,80,1000	0/0:68,0:41:46.36:0,46,883	1/1:29,0:29:20.58:139,21,0	1/1:11,8:19:26.90:284,27,0	1/1:26,0:25:19.87:131,20,0	1/1:28,1:29:56.22:964,56,0	1/1:9,1:10:7.79:107,8,0	1/1:11,5:16:20.13:324,20,0	1/1:22,0:22:11.87:80,12,0	1/1:15,4:19:30.59:329,31,0	1/1:19,0:19:1.77:66,2,0	1/1:20,8:28:48.68:559,49,0	1/1:15,0:15:6.40:56,6,0	1/1:13,0:13:0.81:17,1,0	1/1:12,8:20:36.81:371,37,0	1/1:7,2:9:8.09:148,8,0	0/1:11,4:15:22.23:214,0,22	1/1:12,1:13:20.81:164,21,0	1/1:16,0:16:7.18:43,7,0	1/1:16,4:19:20.81:164,21,0	1/1:5,4:9:14.88:124,15,0	1/1:12,0:12:2.87:18,3,0	1/1:12,2:14:26.82:233,27,0	1/1:14,12:26:42.99:677,43,0	1/1:17,0:17:4.51:116,5,0	1/1:12,0:11:2.63:59,3,0
chr10	32988750	.	A	AAGTGT	1137.50	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.952;DP=736;FS=1.060;HRun=0;HaplotypeScore=133.3361;InbreedingCoeff=0.9998;MQ=82.85;MQ0=0;MQRankSum=-6.099;QD=51.70;ReadPosRankSum=-0.436;VQSLOD=3.8449;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,13:22:39.13:1232,39,0	0/0:14,0:14:42.14:0,42,935	0/0:22,0:22:63.15:0,63,1173	0/0:21,0:21:54.16:0,54,1145	0/0:35,0:35:99:0,102,2232	0/0:39,0:39:99:0,117,2607	0/0:26,0:26:78.18:0,78,1505	0/0:38,0:38:99:0,111,2226	0/0:32,0:32:96.28:0,96,2010	0/0:35,0:35:99:0,105,2240	0/0:27,0:27:81.28:0,81,1789	0/0:24,0:24:72.23:0,72,1530	0/0:26,0:26:78.22:0,78,1595	0/0:28,0:28:84.27:0,84,1795	0/0:31,0:30:90.27:0,90,1916	0/0:38,0:38:99:0,114,2333	0/0:18,0:18:54.16:0,54,1152	0/0:27,0:26:78.24:0,78,1694	0/0:18,0:18:51.17:0,51,1115	0/0:32,0:32:96.31:0,96,2098	0/0:20,0:20:60.21:0,60,1338	0/0:32,0:32:96.32:0,96,2066	0/0:24,0:24:69.22:0,69,1479	0/0:17,0:17:48.15:0,48,1028	0/0:22,0:22:66.21:0,66,1413	0/0:26,0:26:72.24:0,72,1549	0/0:30,0:30:90.31:0,90,2002	0/0:12,0:12:36.12:0,36,803
chr10	32989766	.	CGTGTGTGTGT	C	9974.07	PASS	AB=0.709;AC=40;AF=0.741;AN=54;BaseQRankSum=1.882;DP=861;FS=14.352;HRun=0;HaplotypeScore=277.0076;InbreedingCoeff=0.1179;MQ=51.42;MQ0=23;MQRankSum=-4.980;QD=14.69;ReadPosRankSum=-1.648;VQSLOD=1.5902;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:63:30.06:0,30,374	1/1:1,9:10:8.24:187,8,0	./.	0/0:46,0:16:6:0,6,51	0/1:7,15:23:4.90:85,0,5	0/1:13,11:24:10.51:258,0,11	0/1:17,16:34:3.07:83,0,3	1/1:29,0:26:3.89:106,4,0	1/1:8,13:26:29.63:786,30,0	1/1:19,13:32:39:799,39,0	0/1:7,6:14:9.09:171,0,9	1/1:17,25:47:23.50:1208,24,0	1/1:9,23:34:11.67:1090,12,0	1/1:14,16:33:20.79:569,21,0	0/1:9,0:30:2.82:3,0,90	1/1:10,18:30:5.35:733,5,0	1/1:15,8:25:9.03:221,9,0	1/1:18,13:32:13.26:361,13,0	0/1:13,0:15:23.13:64,0,23	0/1:17,12:32:24.09:241,0,24	0/1:65,0:70:64.10:158,0,64	1/1:7,7:15:2.37:63,2,0	1/1:12,14:26:1.62:46,2,0	0/0:24,12:38:0.25:0,0,1	1/1:10,15:29:12.12:716,12,0	1/1:14,18:33:35.36:1259,35,0	1/1:12,9:22:19.31:519,19,0	1/1:6,3:10:9.02:250,9,0
chr10	32990185	.	A	ATTTTG	798.90	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=1.303;DP=654;FS=0.000;HRun=0;HaplotypeScore=125.3739;InbreedingCoeff=0.6447;MQ=66.67;MQ0=4;MQRankSum=-3.134;QD=14.27;ReadPosRankSum=-2.530;VQSLOD=2.6084;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,9:18:36.02:879,36,0	0/0:14,0:14:27.09:0,27,497	0/0:26,0:22:22.03:0,22,431	0/1:38,0:28:25.63:26,0,272	0/0:29,0:29:60.19:0,60,1081	0/0:27,0:27:54.17:0,54,952	0/0:18,0:18:26.98:0,27,426	0/0:25,0:25:30.09:0,30,493	0/0:19,0:19:42.13:0,42,747	0/0:26,0:26:39.08:0,39,683	0/0:17,0:17:30.10:0,30,552	0/0:17,0:17:33.07:0,33,494	0/0:24,0:24:54.13:0,54,870	0/0:15,0:15:36.11:0,36,628	0/0:26,0:26:63.17:0,63,1074	0/0:24,0:24:42.12:0,42,710	0/0:27,0:27:54.06:0,54,857	0/0:25,0:27:41.41:0,41,756	0/0:17,0:17:33.07:0,33,547	0/0:31,0:31:60.13:0,60,1000	0/0:19,0:19:33.10:0,33,581	0/0:22,0:22:51.15:0,51,877	0/0:28,0:28:66.16:0,66,1086	0/0:25,0:25:60.14:0,60,1006	0/0:33,0:33:60.12:0,60,1044	0/0:25,0:25:42.12:0,42,718	0/0:22,0:22:45.14:0,45,802	0/0:15,0:15:30.06:0,30,452
chr10	32990558	.	T	TA	794.22	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-5.119;DP=582;FS=0.715;HRun=6;HaplotypeScore=54.6399;InbreedingCoeff=0.9199;MQ=71.10;MQ0=0;MQRankSum=0.129;QD=30.55;ReadPosRankSum=0.284;VQSLOD=4.0685;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,25:26:72.20:889,72,0	0/0:7,0:7:18.04:0,18,184	0/0:15,0:15:11.97:0,12,277	0/0:14,0:14:10.29:0,10,199	0/0:38,0:38:99:0,99,1010	0/0:17,0:17:51.10:0,51,512	0/0:11,0:11:30.07:0,30,306	0/0:34,0:34:90.18:0,90,906	0/0:25,0:25:72.13:0,72,725	0/0:19,0:19:51.11:0,51,517	0/0:26,0:26:72.16:0,72,731	0/0:18,0:18:54.12:0,54,551	0/0:36,0:36:99:0,99,1002	0/0:21,0:21:57.11:0,57,575	0/0:19,0:19:54.12:0,54,551	0/0:14,0:14:42.10:0,42,428	0/0:23,0:23:69.16:0,69,703	0/0:12,0:12:33.07:0,33,336	0/0:24,0:24:66.14:0,66,666	0/0:34,0:34:96.21:0,96,978	0/0:15,0:15:36.08:0,36,367	0/0:15,0:15:39.09:0,39,398	0/0:14,0:14:39.08:0,39,398	0/0:9,0:9:24.05:0,24,244	0/0:32,0:32:84.19:0,84,856	0/0:14,0:14:39.09:0,39,398	0/0:34,0:33:99:0,99,1003	0/0:16,0:16:48.11:0,48,488
chr10	32991740	.	AT	A	614.28	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.716;DP=547;FS=8.503;HRun=6;HaplotypeScore=53.9895;InbreedingCoeff=0.9482;MQ=72.53;MQ0=0;MQRankSum=-1.094;QD=23.63;ReadPosRankSum=1.172;VQSLOD=3.0092;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,26:26:66.17:709,66,0	0/0:11,0:11:33.07:0,33,414	0/0:21,0:21:32.06:0,32,434	0/0:17,0:16:14.46:0,14,284	0/0:27,0:27:72.23:0,72,947	0/0:21,0:21:63.20:0,63,829	0/0:10,0:10:30.08:0,30,378	0/0:37,0:37:99:0,99,1288	0/0:16,0:16:39.10:0,39,484	0/0:30,0:30:87.26:0,87,1109	0/0:24,0:24:69.21:0,69,894	0/0:21,0:21:54.16:0,54,695	0/0:20,0:20:60.17:0,60,757	0/0:15,0:15:42.12:0,42,537	0/0:13,0:13:39.11:0,39,485	0/0:24,0:24:72.22:0,72,934	0/0:17,0:17:45.13:0,45,576	0/0:16,0:16:45.15:0,45,591	0/0:21,0:21:45.13:0,45,565	0/0:26,0:26:72.22:0,72,922	0/0:10,0:10:30.10:0,30,394	0/0:7,0:7:21.07:0,21,276	0/0:15,0:15:36.12:0,36,474	0/0:4,0:4:12.04:0,12,157	0/0:21,0:21:63.20:0,63,829	0/0:23,0:23:69.20:0,69,872	0/0:37,0:36:99:0,102,1295	0/0:17,0:17:39.11:0,39,490
chr10	32992606	.	TG	T	936.93	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=8.210;DP=689;FS=0.000;HRun=6;HaplotypeScore=94.7023;InbreedingCoeff=0.9917;MQ=90.23;MQ0=1;MQRankSum=-3.355;QD=25.32;ReadPosRankSum=1.882;VQSLOD=3.3817;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,35:36:96.24:1032,96,0	0/0:6,0:6:18.05:0,18,222	0/0:31,0:30:69.65:0,70,866	0/0:31,0:31:50.96:0,51,682	0/0:20,0:20:57.16:0,57,720	0/0:22,0:22:63.14:0,63,780	0/0:26,0:26:72.22:0,72,934	0/0:42,0:42:99:0,111,1421	0/0:22,0:22:66.20:0,66,853	0/0:28,0:28:81.24:0,81,1038	0/0:18,0:18:54.16:0,54,694	0/0:18,0:18:51.15:0,51,651	0/0:16,0:16:42.12:0,42,524	0/0:34,0:34:87.26:0,87,1112	0/0:22,0:22:63.20:0,63,829	0/0:27,0:27:78.23:0,78,999	0/0:41,0:41:99:0,114,1500	0/0:19,0:19:54.17:0,54,706	0/0:22,0:22:51.15:0,51,656	0/0:27,0:27:75.21:0,75,944	0/0:44,0:44:99:0,123,1564	0/0:18,0:18:51.14:0,51,640	0/0:13,0:13:39.09:0,39,481	0/0:27,0:27:78.20:0,78,991	0/0:23,0:23:63.18:0,63,812	0/0:25,0:25:72.23:0,72,947	0/0:19,0:19:51.15:0,51,656	0/0:11,0:11:33.11:0,33,434
chr10	32993926	.	A	AAC	1122.78	PASS	AB=0.934;AC=31;AF=0.674;AN=46;BaseQRankSum=-2.978;DP=482;FS=5.324;HRun=0;HaplotypeScore=87.0202;InbreedingCoeff=-0.1346;MQ=68.63;MQ0=10;MQRankSum=0.061;QD=3.17;ReadPosRankSum=0.699;VQSLOD=1.1419;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:21:28.06:53,0,28	./.	./.	0/0:38,0:20:0:0,0,0	0/1:15,2:17:18.15:100,0,18	0/1:19,0:19:21.70:64,0,22	1/1:15,2:17:2.71:44,3,0	./.	1/1:10,0:10:2.92:17,3,0	0/1:23,0:26:0.26:0,0,69	0/0:7,0:6:2.97:0,3,20	1/1:13,0:13:9.02:112,9,0	1/1:19,1:17:1.74:41,2,0	0/1:15,1:16:42.57:93,0,43	0/1:20,4:23:19.93:119,0,20	1/1:9,1:11:6.01:68,6,0	0/1:28,1:26:5.18:75,0,5	1/1:16,1:17:4.57:48,5,0	./.	1/1:13,1:14:2.97:20,3,0	1/1:26,0:26:8.99:95,9,0	1/1:10,1:12:3.01:44,3,0	./.	0/1:18,6:27:24.12:157,0,24	0/1:14,0:15:10.58:11,0,73	1/1:12,0:12:6.48:58,6,0	1/1:7,0:7:5.49:33,5,0	0/0:6,0:6:2.96:0,3,31
chr10	32994354	.	C	CT	21876.79	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-9.855;DP=590;FS=0.000;HRun=1;HaplotypeScore=57.4041;InbreedingCoeff=0.9685;MQ=86.69;MQ0=0;MQRankSum=-10.371;QD=40.89;ReadPosRankSum=6.722;VQSLOD=4.4596;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,25:25:69.23:1033,69,0	1/1:0,4:4:12.04:180,12,0	0/0:20,0:19:52.97:0,53,650	0/0:35,0:35:84.45:0,84,989	1/1:0,16:16:48.16:719,48,0	1/1:0,30:30:84.28:1259,84,0	1/1:0,15:15:42.14:630,42,0	1/1:3,30:33:84.26:1221,84,0	1/1:0,23:23:66.22:989,66,0	1/1:1,18:19:54.16:788,54,0	1/1:0,17:17:48.16:719,48,0	1/1:1,17:18:48.16:720,48,0	1/1:2,35:37:96.32:1433,96,0	1/1:0,26:26:75.25:1124,75,0	1/1:1,24:25:72.24:1079,72,0	1/1:1,18:19:48.16:720,48,0	1/1:0,20:20:57.19:854,57,0	1/1:0,9:9:27.09:405,27,0	1/1:1,18:19:57.19:853,57,0	1/1:0,15:15:39.13:584,39,0	1/1:0,18:18:51.17:764,51,0	1/1:1,16:17:36.12:539,36,0	1/1:0,14:14:36.12:539,36,0	1/1:1,25:26:69.23:1034,69,0	1/1:0,24:24:66.22:989,66,0	1/1:1,32:33:96.29:1395,96,0	1/1:1,27:27:75.25:1124,75,0	1/1:0,5:5:12.04:180,12,0
chr10	32994614	.	C	CTT	478.71	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.650;DP=364;FS=10.006;HRun=10;HaplotypeScore=48.4645;InbreedingCoeff=0.6181;MQ=72.88;MQ0=2;MQRankSum=-1.165;QD=23.94;ReadPosRankSum=-0.987;VQSLOD=1.6575;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,15:20:41.62:573,42,0	0/0:1,0:1:3.01:0,3,31	0/0:12,0:10:3.03:0,3,61	0/0:9,0:8:7.49:0,7,72	0/0:15,0:16:35.96:0,36,411	0/0:14,0:14:42.08:0,42,420	0/0:8,0:8:21.04:0,21,214	0/0:31,0:31:63.01:0,63,630	0/0:9,0:9:18.02:0,18,183	0/0:11,0:11:27.04:0,27,266	0/0:16,0:16:44.82:0,45,433	0/0:7,0:7:18.02:0,18,176	0/0:12,0:12:21.01:0,21,206	0/0:12,0:11:27.05:0,27,273	0/0:4,0:4:12.03:0,12,122	0/0:11,0:11:27.05:0,27,275	0/0:22,0:23:50.78:0,51,491	0/0:18,0:18:45.07:0,45,458	0/0:12,0:11:24:0,24,232	0/0:19,0:20:35.75:0,36,403	0/0:11,0:11:30.07:0,30,305	0/0:11,0:11:30.07:0,30,305	0/0:17,0:17:39.07:0,39,397	0/0:7,0:7:12.89:0,13,124	0/0:15,0:15:38.97:0,39,370	0/0:20,0:20:54.10:0,54,548	0/0:10,0:11:14.75:0,15,205	0/0:6,0:6:9.02:0,9,92
chr10	32996526	.	TC	T	199.10	PASS	AC=14;AF=1.000;AN=14;DP=30;FS=0.000;HRun=5;HaplotypeScore=8.4093;MQ=29.11;MQ0=1;QD=11.06;VQSLOD=-0.2919;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	1/1:1,4:5:3.01:34,3,0	./.	1/1:0,2:2:3.01:34,3,0	./.	./.	./.	./.	./.	./.	1/1:0,1:1:3.01:31,3,0	./.	1/1:0,4:4:6.02:68,6,0	./.	./.	./.	1/1:0,4:4:3.01:33,3,0	./.	./.	1/1:0,1:1:3.01:34,3,0	./.	./.	./.	1/1:0,1:1:3.01:34,3,0	./.
chr10	32997395	.	TA	T	428.94	PASS	AB=0.889;AC=3;AF=0.054;AN=56;BaseQRankSum=6.649;DP=546;FS=1.592;HRun=9;HaplotypeScore=51.6459;InbreedingCoeff=0.6053;MQ=70.57;MQ0=0;MQRankSum=-0.559;QD=14.79;ReadPosRankSum=0.302;VQSLOD=3.4706;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,20:21:57.03:522,57,0	0/0:15,1:16:17.67:0,18,457	0/0:5,0:5:9.02:0,9,100	0/0:13,1:14:7.53:0,8,275	0/0:24,0:24:69.20:0,69,787	0/0:22,0:22:66.19:0,66,758	0/0:20,0:20:54.16:0,54,618	0/0:32,0:32:71.28:0,71,859	0/0:14,0:14:39.12:0,39,450	0/0:27,0:27:72.20:0,72,819	0/0:22,0:22:66.16:0,66,734	0/0:16,0:16:48.14:0,48,552	0/0:19,0:19:51.15:0,51,589	0/0:22,1:23:35.71:0,36,657	0/0:17,0:17:51.14:0,51,580	0/0:20,0:20:57.13:0,57,643	0/0:13,0:13:36.11:0,36,415	0/1:7,1:8:9.42:9,0,142	0/0:18,0:18:45.12:0,45,507	0/0:40,0:40:99:0,105,1199	0/0:8,0:9:26.91:0,27,291	0/0:20,0:20:57.16:0,57,650	0/0:24,0:24:57.16:0,57,649	0/0:18,0:18:54.15:0,54,614	0/0:29,1:30:44.74:0,45,758	0/0:19,0:19:45.12:0,45,511	0/0:27,1:27:41.70:0,42,709	0/0:7,0:7:21.06:0,21,242
chr10	32999019	.	A	ATG	4162.21	PASS	AB=1.000;AC=50;AF=0.926;AN=54;BaseQRankSum=3.696;DP=577;FS=7.983;HRun=0;HaplotypeScore=124.9451;InbreedingCoeff=0.2598;MQ=60.32;MQ0=8;MQRankSum=-3.423;QD=7.71;ReadPosRankSum=3.836;VQSLOD=2.7908;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:11,11:22:12.04:184,12,0	1/1:8,0:8:11.02:88,11,0	0/0:26,0:14:6:0,6,55	./.	1/1:22,0:22:23.92:154,24,0	1/1:23,0:23:19.02:129,19,0	1/1:18,0:18:10.59:75,11,0	0/1:32,0:32:18.95:19,0,57	1/1:14,0:14:17.94:142,18,0	1/1:32,0:31:6.56:204,7,0	1/1:21,1:22:20.97:193,21,0	1/1:16,0:17:20.92:172,21,0	1/1:13,0:13:14.95:119,15,0	1/1:23,0:23:14.01:105,14,0	1/1:22,0:22:41.90:359,42,0	1/1:23,0:23:43.72:344,44,0	1/1:22,0:22:11.97:102,12,0	1/1:8,0:8:2.96:19,3,0	0/1:21,0:20:4.26:80,0,4	1/1:36,0:36:50.98:377,51,0	1/1:24,0:24:8.97:70,9,0	1/1:22,0:23:28.85:229,29,0	1/1:22,0:21:28.03:207,28,0	1/1:12,0:12:10.06:60,10,0	1/1:18,0:19:23.85:188,24,0	1/1:28,0:29:30.37:304,30,0	1/1:20,0:20:26.74:215,27,0	1/1:13,0:13:2.99:24,3,0
chr10	32999041	.	G	GTGTGTA	15904.38	PASS	AB=0.588;AC=47;AF=0.839;AN=56;BaseQRankSum=-6.001;DP=601;FS=3.860;HRun=0;HaplotypeScore=121.3565;InbreedingCoeff=0.5389;MQ=61.44;MQ0=7;MQRankSum=-4.863;QD=29.78;ReadPosRankSum=5.744;VQSLOD=4.5360;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:28.66:0,29,184	0/1:3,5:8:10.02:246,0,10	0/0:27,0:18:44.95:0,45,457	0/0:15,0:13:32.87:0,33,332	1/1:4,17:27:18.06:554,18,0	1/1:1,18:23:15.05:459,15,0	1/1:1,16:19:12.03:275,12,0	1/1:11,0:22:45.86:455,46,0	1/1:0,10:12:18.06:598,18,0	1/1:5,22:31:26.31:1234,26,0	1/1:5,14:21:10.58:615,11,0	1/1:6,12:19:21.07:716,21,0	1/1:3,6:11:15.05:401,15,0	1/1:1,14:17:12.04:414,12,0	1/1:1,0:24:39.68:527,40,0	1/1:1,26:29:42.14:1401,42,0	1/1:13,0:25:2.40:263,2,0	1/1:10,0:10:20.88:168,21,0	1/1:8,8:15:8.97:568,9,0	1/1:4,32:40:27.17:1363,27,0	0/1:9,1:24:6.95:146,0,7	1/1:4,18:24:27.55:854,28,0	1/1:1,23:26:23.71:833,24,0	1/1:0,17:18:6.02:209,6,0	1/1:2,15:17:24.08:827,24,0	1/1:3,27:31:54.30:1799,54,0	1/1:1,25:31:26.35:878,26,0	0/1:1,6:8:12.97:98,0,13
chr10	33000114	.	A	AGTGTGT	5811.54	PASS	AB=0.890;AC=48;AF=0.923;AN=52;BaseQRankSum=-1.945;DP=515;FS=0.000;HRun=0;HaplotypeScore=138.5690;InbreedingCoeff=-0.1432;MQ=65.51;MQ0=3;MQRankSum=0.554;QD=12.26;ReadPosRankSum=0.728;VQSLOD=3.9061;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:17,0:16:48.72:66,0,49	1/1:8,0:8:15.05:370,15,0	./.	./.	1/1:14,3:19:2.88:96,3,0	1/1:19,5:25:9.03:264,9,0	1/1:18,3:22:2.59:96,3,0	1/1:24,0:23:15.05:331,15,0	1/1:7,1:10:6.02:135,6,0	1/1:17,0:17:12.89:251,13,0	1/1:17,0:17:9.01:134,9,0	1/1:10,0:9:9.01:122,9,0	1/1:22,0:22:9.87:143,10,0	1/1:9,1:18:15.50:350,16,0	1/1:12,3:17:6.02:166,6,0	1/1:7,6:15:9.03:289,9,0	0/1:16,5:22:5.93:264,0,6	1/1:21,0:20:18.04:282,18,0	1/1:15,0:14:6.02:141,6,0	0/1:12,2:17:2.01:91,0,2	1/1:13,0:17:2.99:38,3,0	1/1:7,3:10:8.92:288,9,0	1/1:25,0:25:13.78:340,14,0	1/1:14,5:20:7.02:285,7,0	1/1:9,4:13:2.62:96,3,0	1/1:31,0:31:46.01:889,46,0	0/1:23,0:23:45.53:146,0,46	1/1:13,1:14:8.98:140,9,0
chr10	33000155	.	G	GTGTG	4596.91	PASS	AB=0.910;AC=51;AF=0.944;AN=54;BaseQRankSum=-1.159;DP=484;FS=2.051;HRun=0;HaplotypeScore=126.2075;InbreedingCoeff=-0.0257;MQ=59.04;MQ0=5;MQRankSum=1.189;QD=9.89;ReadPosRankSum=0.499;VQSLOD=4.1704;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:16,0:16:46.69:63,0,47	1/1:7,0:7:15.05:327,15,0	0/1:23,0:13:0:0,0,0	./.	1/1:21,0:21:2.67:52,3,0	1/1:22,0:21:6.02:104,6,0	1/1:21,0:21:5.46:103,5,0	1/1:23,0:22:12.92:190,13,0	1/1:5,0:5:6.02:123,6,0	1/1:11,0:11:15.02:240,15,0	1/1:10,0:10:9.01:134,9,0	1/1:16,0:15:9.01:122,9,0	1/1:20,0:20:12.93:252,13,0	1/1:19,0:19:15.03:249,15,0	1/1:15,0:15:3.01:52,3,0	1/1:20,0:20:4.06:149,4,0	1/1:21,0:20:8.86:159,9,0	1/1:16,0:16:23.55:367,24,0	1/1:17,0:15:9.03:202,9,0	1/1:12,0:12:4.81:57,5,0	1/1:15,0:15:3.01:71,3,0	1/1:13,0:13:8.78:156,9,0	1/1:22,0:22:14.23:256,14,0	1/1:18,0:17:9.92:158,10,0	1/1:18,0:18:2.54:52,3,0	1/1:28,0:28:39.09:621,39,0	0/1:17,7:27:25.54:240,0,26	1/1:9,0:9:10.79:101,11,0
chr10	33000348	.	A	AGT	2047.20	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-3.425;DP=779;FS=1.330;HRun=0;HaplotypeScore=92.4825;InbreedingCoeff=0.9998;MQ=78.88;MQ0=0;MQRankSum=-3.460;QD=47.61;ReadPosRankSum=0.718;VQSLOD=4.8552;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,42:43:99:2142,117,0	0/0:17,0:17:51.17:0,51,730	0/0:34,0:34:84.26:0,84,1126	0/0:18,0:18:39.10:0,39,517	0/0:24,0:24:66.22:0,66,945	0/0:31,0:31:87.28:0,87,1227	0/0:31,0:31:87.24:0,87,1204	0/0:25,0:25:75.25:0,75,1058	0/0:21,0:21:63.18:0,63,866	0/0:31,0:31:90.30:0,90,1273	0/0:25,0:25:69.23:0,69,986	0/0:32,0:32:93.29:0,93,1310	0/0:34,0:34:99:0,99,1396	0/0:28,0:28:84.26:0,84,1167	0/0:41,0:41:99:0,117,1652	0/0:34,0:34:99:0,99,1401	0/0:28,0:28:81.25:0,81,1136	0/0:12,0:12:36.12:0,36,515	0/0:26,0:26:75.03:0,75,992	0/0:27,0:27:75.21:0,75,1014	0/0:45,0:45:99:0,129,1809	0/0:25,0:25:69.23:0,69,984	0/0:18,0:18:51.17:0,51,724	0/0:27,0:27:78.23:0,78,1080	0/0:19,0:19:51.17:0,51,730	0/0:32,0:32:93.29:0,93,1284	0/0:33,0:33:96.28:0,96,1319	0/0:18,0:18:48.16:0,48,687
chr10	33002150	.	C	CAT	217.50	PASS	AB=1.000;AC=4;AF=0.071;AN=56;BaseQRankSum=1.857;DP=572;FS=12.153;HRun=0;HaplotypeScore=139.0184;InbreedingCoeff=0.5174;MQ=61.04;MQ0=6;MQRankSum=-2.352;QD=3.35;ReadPosRankSum=-0.168;VQSLOD=2.2135;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:5,12:17:18.06:306,18,0	0/0:7,0:7:18.06:0,18,233	0/1:17,0:8:6:6,0,9	0/1:31,0:7:8.76:9,0,45	0/0:40,0:40:99:0,105,1326	0/0:27,0:27:72.14:0,72,845	0/0:10,0:10:24.06:0,24,286	0/0:30,0:30:46.93:0,47,757	0/0:28,0:28:63.18:0,63,799	0/0:25,0:25:66.13:0,66,812	0/0:26,0:26:78.10:0,78,929	0/0:18,0:18:54.14:0,54,658	0/0:23,0:23:57.76:0,58,731	0/0:24,0:24:72.20:0,72,903	0/0:27,0:26:72.16:0,72,853	0/0:19,0:19:51.16:0,51,649	0/0:21,0:21:51.08:0,51,597	0/0:10,0:10:27.09:0,27,350	0/0:15,0:14:35.83:0,36,431	0/0:36,0:36:93.25:0,93,1151	0/0:8,0:8:21.03:0,21,254	0/0:6,0:6:15.04:0,15,180	0/0:11,0:11:27.07:0,27,334	0/0:10,0:10:24.05:0,24,285	0/0:29,0:29:78.17:0,78,926	0/0:29,0:29:81.26:0,81,1043	0/0:24,0:24:60.18:0,60,760	0/0:4,0:4:12.04:0,12,155
chr10	33002427	.	T	TC	12923.23	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-13.380;DP=693;FS=0.628;HRun=6;HaplotypeScore=68.5741;InbreedingCoeff=0.9960;MQ=90.68;MQ0=0;MQRankSum=-2.037;QD=30.55;ReadPosRankSum=2.375;VQSLOD=5.5315;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,105,1041	1/1:1,7:8:18.06:226,18,0	0/0:22,0:22:47.69:0,48,464	0/0:31,0:31:77.96:0,78,760	0/0:26,0:26:66.13:0,66,666	0/0:28,0:28:71.15:0,71,700	0/0:27,0:27:66.08:0,66,650	1/1:9,22:31:60.09:693,60,0	0/0:27,0:27:78.18:0,78,796	1/1:2,18:20:45.14:566,45,0	1/1:1,17:18:48.15:603,48,0	1/1:3,30:33:81.20:1019,81,0	1/1:2,28:30:78.25:981,78,0	1/1:1,37:39:99:1312,105,0	0/0:34,0:34:96.20:0,96,972	1/1:0,28:28:75.24:943,75,0	0/0:27,0:27:75.14:0,75,757	0/0:8,0:8:15.03:0,15,153	1/1:4,17:21:51.16:641,51,0	1/1:2,15:17:39.08:473,39,0	1/1:3,32:35:90.29:1132,90,0	1/1:1,12:13:33.06:398,33,0	1/1:1,13:14:33.09:401,33,0	1/1:5,25:30:69.22:868,69,0	1/1:3,26:29:69.22:868,69,0	1/1:0,24:24:57.17:703,57,0	1/1:1,24:25:63.20:792,63,0	1/1:0,8:8:24.08:301,24,0
chr10	33003182	.	AATATATAT	A	307.51	PASS	AB=0.857;AC=10;AF=0.625;AN=16;BaseQRankSum=1.386;DP=133;FS=4.260;HRun=0;HaplotypeScore=34.3534;MQ=99.11;MQ0=7;MQRankSum=-2.166;QD=9.32;ReadPosRankSum=1.386;VQSLOD=0.6150;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	0/0:18,0:10:0.94:0,1,2	./.	./.	./.	0/0:22,0:21:0:0,0,0	./.	./.	./.	./.	1/1:2,0:4:6.02:112,6,0	./.	./.	1/1:4,0:5:3.01:56,3,0	0/1:9,5:15:11.06:82,0,11	0/1:3,0:3:0:0,0,0	./.	./.	./.	./.	./.	1/1:1,0:2:3.01:56,3,0	./.	./.	./.	1/1:3,1:3:3.01:75,3,0
chr10	33004412	.	C	CGTAGTAGTA	7550.21	PASS	AB=1.000;AC=43;AF=0.860;AN=50;BaseQRankSum=-2.971;DP=385;FS=12.575;HRun=0;HaplotypeScore=105.2099;InbreedingCoeff=0.3692;MQ=65.33;MQ0=4;MQRankSum=-2.416;QD=25.00;ReadPosRankSum=-1.757;VQSLOD=3.2203;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:12.04:0,12,272	1/1:3,2:5:9.01:267,9,0	0/0:15,0:12:2.92:0,3,17	0/0:19,0:17:2.89:0,3,16	1/1:6,3:11:3.01:114,3,0	1/1:13,1:14:12.04:336,12,0	1/1:8,4:13:3.01:117,3,0	1/1:37,0:36:48.07:668,48,0	1/1:8,0:8:3.01:121,3,0	1/1:8,6:17:27:749,27,0	1/1:7,3:12:6.02:167,6,0	1/1:8,2:11:15.05:427,15,0	1/1:13,8:21:21.06:720,21,0	1/1:13,6:19:24.08:837,24,0	0/1:12,0:12:97.63:238,0,98	1/1:7,0:7:3.01:117,3,0	1/1:19,2:21:17.99:495,18,0	1/1:10,1:10:16.31:448,16,0	1/1:11,0:9:6.02:142,6,0	1/1:3,8:12:15.05:525,15,0	./.	1/1:3,2:5:3.01:118,3,0	./.	1/1:4,6:10:3.01:111,3,0	1/1:6,8:16:6.02:238,6,0	1/1:6,0:10:15.02:282,15,0	1/1:6,9:17:9.02:311,9,0	./.
chr10	33004455	.	GTCA	G	631.37	PASS	AB=0.978;AC=32;AF=0.615;AN=52;BaseQRankSum=6.947;DP=240;FS=6.422;HRun=0;HaplotypeScore=67.4757;InbreedingCoeff=0.3303;MQ=41.98;MQ0=7;MQRankSum=-0.975;QD=4.35;ReadPosRankSum=1.045;VQSLOD=1.0389;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:7:14.81:0,15,112	1/1:3,0:3:3.76:17,4,0	0/0:12,0:6:11.09:0,11,122	0/0:10,0:6:17.16:0,17,133	1/1:5,0:5:5.62:27,6,0	0/1:13,0:13:5.91:48,0,6	1/1:3,0:3:5.67:28,6,0	0/0:35,0:34:85.18:0,85,703	0/0:3,0:3:2.92:0,3,17	0/1:9,0:9:18.78:49,0,19	1/1:4,0:3:5.09:19,5,0	1/1:9,1:9:15.32:78,15,0	1/1:12,0:11:19.20:78,19,0	0/1:11,2:13:14.92:106,0,15	0/0:8,0:8:23.86:0,24,179	1/1:7,0:7:2.80:14,3,0	1/1:20,2:22:16.53:152,17,0	0/1:11,0:10:13.49:13,0,54	0/0:6,1:7:3.61:0,4,68	1/1:5,0:5:13.79:70,14,0	./.	1/1:1,0:1:2.94:18,3,0	./.	1/1:2,0:2:2.90:16,3,0	0/1:8,0:8:4.16:4,0,179	0/1:6,0:6:8.39:8,0,49	1/1:7,0:7:7.14:27,7,0	1/1:4,0:4:5.72:29,6,0
chr10	33004457	.	CATA	C	988.08	PASS	AB=0.821;AC=28;AF=0.824;AN=34;BaseQRankSum=1.746;DP=209;FS=1.516;HRun=0;HaplotypeScore=51.9195;InbreedingCoeff=0.1836;MQ=43.85;MQ0=7;MQRankSum=0.865;QD=8.59;ReadPosRankSum=0.896;VQSLOD=2.6589;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	1/1:2,0:3:2.88:15,3,0	./.	./.	1/1:5,0:5:3.01:39,3,0	0/1:4,5:9:26.12:69,0,26	1/1:3,0:3:3.01:39,3,0	0/0:30,0:29:6.01:0,6,67	./.	1/1:7,2:9:9.03:115,9,0	./.	1/1:7,0:6:3.01:39,3,0	1/1:11,0:10:6.02:78,6,0	0/1:11,0:11:48.05:69,0,48	./.	1/1:1,2:3:2.29:38,2,0	1/1:16,1:18:24.08:310,24,0	1/1:10,0:9:5.97:75,6,0	1/1:5,0:8:5.95:42,6,0	./.	./.	./.	./.	./.	0/0:9,0:9:15.05:0,15,274	1/1:6,0:6:5.95:57,6,0	1/1:6,1:7:2.92:39,3,0	1/1:0,5:5:6.02:78,6,0
chr10	33004817	.	GATATATATATATATATAT	G	933.81	PASS	AC=16;AF=0.889;AN=18;BaseQRankSum=1.085;DP=122;FS=0.000;HRun=0;HaplotypeScore=58.1492;MQ=84.03;MQ0=4;MQRankSum=-1.735;QD=18.31;ReadPosRankSum=1.519;VQSLOD=1.1655;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	0/0:9,0:5:1.25:0,1,3	./.	./.	./.	1/1:15,7:22:19.98:271,20,0	./.	./.	1/1:2,0:2:3:26,3,0	./.	1/1:2,0:4:3.01:136,3,0	./.	./.	1/1:3,0:3:3:27,3,0	1/1:6,0:5:3.01:143,3,0	1/1:4,0:7:3.01:137,3,0	./.	./.	./.	./.	./.	1/1:3,0:3:2.99:24,3,0	./.	1/1:2,0:4:6.02:242,6,0	./.	./.
chr10	33005734	.	GA	G	234.65	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.830;DP=606;FS=3.639;HRun=9;HaplotypeScore=57.2557;InbreedingCoeff=0.9870;MQ=70.20;MQ0=0;MQRankSum=-0.671;QD=15.64;ReadPosRankSum=2.512;VQSLOD=3.8731;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,13:15:36.02:329,36,0	0/0:10,0:10:30.09:0,30,346	0/0:10,0:10:18.05:0,18,200	0/0:8,0:7:20.93:0,21,187	0/0:32,0:32:90.26:0,90,1030	0/0:26,0:27:62.99:0,63,688	0/0:16,0:16:45.12:0,45,508	0/0:33,0:33:93.25:0,93,1049	0/0:18,0:18:51.15:0,51,589	0/0:29,0:29:72.20:0,72,822	0/0:26,0:26:60.17:0,60,683	0/0:26,0:26:69.21:0,69,796	0/0:22,1:23:38.72:0,39,689	0/0:21,0:21:57.17:0,57,658	0/0:22,0:23:69.02:0,69,767	0/0:24,0:25:69.03:0,69,768	0/0:18,0:20:50.82:0,51,548	0/0:19,0:18:54.14:0,54,613	0/0:18,0:18:48.08:0,48,537	0/0:31,0:32:84.07:0,84,941	0/0:19,0:19:57.15:0,57,648	0/0:22,0:22:63.19:0,63,727	0/0:30,0:30:87.25:0,87,993	0/0:17,0:18:35.19:0,35,435	0/0:24,1:25:47.74:0,48,792	0/0:22,0:24:69.03:0,69,766	0/0:24,0:24:66.20:0,66,760	0/0:13,0:13:39.06:0,39,432
chr10	33006526	.	GACA	G	1294.35	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.488;DP=775;FS=0.000;HRun=0;HaplotypeScore=106.6459;InbreedingCoeff=0.9996;MQ=73.80;MQ0=0;MQRankSum=-3.882;QD=28.76;ReadPosRankSum=1.572;VQSLOD=3.7963;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,41:45:87.21:1389,87,0	0/0:12,0:12:36.12:0,36,816	0/0:14,0:14:33.21:0,33,700	0/0:22,0:22:60.20:0,60,1211	0/0:20,0:20:54.19:0,54,1224	0/0:23,0:23:66.23:0,66,1491	0/0:34,0:34:96.33:0,96,2173	0/0:28,0:28:72.25:0,72,1630	0/0:18,0:18:54.17:0,54,1180	0/0:23,0:23:69.24:0,69,1564	0/0:16,0:16:45.15:0,45,976	0/0:33,0:33:90.27:0,90,1983	0/0:28,0:28:81.24:0,81,1740	0/0:45,0:44:99:0,129,2857	0/0:38,0:38:99:0,111,2472	0/0:37,0:37:99:0,105,2353	0/0:32,0:31:93.31:0,93,2061	0/0:27,0:27:78.27:0,78,1764	0/0:18,0:18:51.18:0,51,1143	0/0:35,0:35:99:0,99,2198	0/0:37,0:37:99:0,111,2510	0/0:21,0:21:57.18:0,57,1249	0/0:22,0:22:66.23:0,66,1494	0/0:46,0:45:99:0,132,2980	0/0:24,0:24:72.25:0,72,1623	0/0:19,0:19:57.19:0,57,1251	0/0:34,0:34:93.32:0,93,2107	0/0:24,0:24:72.25:0,72,1625
chr10	33006714	.	C	CTTT	6360.45	PASS	AB=1.000;AC=54;AF=0.964;AN=56;BaseQRankSum=-0.381;DP=549;FS=2.500;HRun=17;HaplotypeScore=107.0784;InbreedingCoeff=0.1953;MQ=69.44;MQ0=1;MQRankSum=-2.946;QD=11.59;ReadPosRankSum=-1.926;VQSLOD=1.6693;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:22:9.77:61,10,0	1/1:2,0:8:8.87:58,9,0	0/1:26,0:15:1.71:2,0,7	0/1:14,0:12:6.77:7,0,18	1/1:17,13:33:54.45:646,54,0	1/1:6,0:17:2.98:22,3,0	1/1:12,7:20:24.08:345,24,0	1/1:27,0:27:22.29:286,22,0	1/1:13,0:13:19.58:224,20,0	1/1:14,12:27:51.36:610,51,0	1/1:9,11:21:36.25:394,36,0	1/1:5,0:13:3.01:47,3,0	1/1:11,0:11:18.02:228,18,0	1/1:18,0:17:33.08:481,33,0	1/1:8,7:19:8.06:102,8,0	1/1:15,0:15:14.77:157,15,0	1/1:9,3:24:17.09:201,17,0	1/1:4,0:15:12.04:172,12,0	1/1:17,0:17:16.18:136,16,0	1/1:27,0:28:54.96:679,55,0	1/1:7,0:7:3.48:37,3,0	1/1:18,0:17:24.26:262,24,0	1/1:26,0:25:33.99:373,34,0	1/1:9,1:17:9.03:128,9,0	1/1:12,0:22:17.99:192,18,0	1/1:22,0:23:19.80:240,20,0	1/1:22,11:36:14.38:133,14,0	1/1:3,2:7:9.03:136,9,0
chr10	33008061	.	C	CA	27408.98	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-8.727;DP=646;FS=8.023;HRun=0;HaplotypeScore=57.9585;InbreedingCoeff=0.9912;MQ=82.59;MQ0=0;MQRankSum=-9.243;QD=44.86;ReadPosRankSum=5.839;VQSLOD=4.3561;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,24:24:69.24:1101,69,0	1/1:0,7:7:15:240,15,0	0/0:19,0:19:53.96:0,54,700	0/0:16,0:16:42.98:0,43,545	1/1:0,39:39:99:1811,114,0	1/1:0,26:26:72.25:1151,72,0	1/1:0,18:18:54.18:861,54,0	1/1:0,28:28:84.26:1292,84,0	1/1:0,14:14:39.13:623,39,0	1/1:1,29:30:90.31:1439,90,0	1/1:0,24:24:69.24:1100,69,0	1/1:0,29:29:78.27:1247,78,0	1/1:1,27:28:78.27:1247,78,0	1/1:0,22:22:63.21:1006,63,0	1/1:0,20:20:60.20:959,60,0	1/1:0,16:16:42.14:670,42,0	1/1:1,20:21:51.17:815,51,0	1/1:1,17:18:45.15:718,45,0	1/1:0,19:19:57.19:910,57,0	1/1:0,35:35:99:1629,102,0	1/1:0,9:9:27.09:432,27,0	1/1:0,24:24:72.25:1151,72,0	1/1:0,23:23:60.20:955,60,0	1/1:1,21:22:41.77:803,42,0	1/1:0,32:32:90.31:1439,90,0	1/1:1,28:29:84.27:1318,84,0	1/1:0,38:38:99:1774,111,0	1/1:0,16:16:45.15:719,45,0
chr10	33011200	.	A	AT	4328.47	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=1.304;DP=490;FS=26.910;HRun=0;HaplotypeScore=177.2549;InbreedingCoeff=0.9117;MQ=71.86;MQ0=1;MQRankSum=0.781;QD=10.23;ReadPosRankSum=2.161;VQSLOD=3.2701;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:52.93:0,53,588	1/1:7,0:7:18.19:96,18,0	0/0:18,0:18:29.02:0,29,436	0/0:30,0:20:14.86:0,15,382	1/1:24,1:25:20.59:215,21,0	1/1:22,0:22:50.60:276,51,0	1/1:11,1:12:6.69:67,7,0	1/1:32,2:34:64.94:422,65,0	1/1:8,0:8:14.43:78,14,0	1/1:14,0:14:19.17:152,19,0	1/1:15,3:18:23:137,23,0	1/1:12,0:12:23.55:155,24,0	1/1:18,0:18:26.56:132,27,0	1/1:13,0:13:9.03:78,9,0	1/1:11,0:11:23.06:124,23,0	1/1:15,0:15:29.80:160,30,0	1/1:22,0:22:39.46:212,39,0	1/1:13,0:12:25.62:113,26,0	1/1:11,2:13:38.30:279,38,0	1/1:25,0:25:48.89:262,49,0	1/1:14,0:14:28.85:156,29,0	1/1:10,0:10:10.71:55,11,0	1/1:16,0:16:22.84:130,23,0	1/1:16,0:16:32.67:188,33,0	1/1:24,0:24:46.96:259,47,0	1/1:22,0:22:22.03:184,22,0	1/1:21,1:22:45.41:227,45,0	1/1:17,0:17:37.77:172,38,0
chr10	33011214	.	AAGG	A	16692.58	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=4.318;DP=532;FS=13.738;HRun=0;HaplotypeScore=145.7125;InbreedingCoeff=0.9852;MQ=68.68;MQ0=1;MQRankSum=-4.245;QD=37.68;ReadPosRankSum=3.935;VQSLOD=5.2991;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:58.69:0,59,1231	1/1:0,6:6:14.90:255,15,0	0/0:29,0:21:20.21:0,20,579	0/0:38,0:20:17.22:0,17,326	1/1:1,23:24:62.91:896,63,0	1/1:1,20:21:51.11:833,51,0	1/1:0,14:14:24.01:373,24,0	1/1:3,29:32:84.10:1178,84,0	1/1:0,11:11:20.94:291,21,0	1/1:0,15:15:45.13:699,45,0	1/1:1,21:22:53.71:685,54,0	1/1:1,13:14:36.07:561,36,0	1/1:0,18:18:45.02:681,45,0	1/1:2,12:14:39.07:628,39,0	1/1:1,12:13:27.02:425,27,0	1/1:1,15:16:42.08:678,42,0	1/1:0,20:20:42.14:711,42,0	1/1:1,9:9:23.87:369,24,0	1/1:0,13:13:39.06:571,39,0	1/1:0,30:30:83.87:1170,84,0	1/1:1,15:16:33.03:502,33,0	1/1:0,12:12:32.98:491,33,0	1/1:0,19:19:39.06:629,39,0	1/1:1,18:19:42.06:679,42,0	1/1:0,22:22:51.17:863,51,0	1/1:0,23:23:69.04:981,69,0	1/1:2,22:24:54.06:913,54,0	1/1:0,15:15:39.08:631,39,0
chr10	33011498	.	ATTTG	A	19434.94	PASS	AB=0.889;AC=51;AF=0.911;AN=56;BaseQRankSum=-0.318;DP=679;FS=2.263;HRun=0;HaplotypeScore=119.3337;InbreedingCoeff=0.7699;MQ=72.60;MQ0=4;MQRankSum=-3.712;QD=31.50;ReadPosRankSum=6.660;VQSLOD=4.8359;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,24:33:52.29:884,52,0	1/1:1,5:6:15.05:247,15,0	0/0:34,0:34:44.85:0,45,1189	0/0:28,0:27:39.13:0,39,832	1/1:12,14:25:39.13:641,39,0	1/1:6,16:22:48.16:789,48,0	1/1:8,14:22:42.14:691,42,0	1/1:16,18:34:54.17:857,54,0	1/1:4,20:24:54.18:887,54,0	1/1:9,15:24:48.16:787,48,0	1/1:4,13:17:39.13:641,39,0	1/1:1,21:21:54.18:887,54,0	1/1:9,23:32:57.19:937,57,0	1/1:6,24:30:60.20:986,60,0	1/1:1,32:32:87.30:1430,87,0	1/1:8,23:31:54.18:888,54,0	1/1:7,13:20:33.11:542,33,0	0/1:6,1:8:40.30:40,0,71	1/1:12,12:24:36.12:585,36,0	1/1:7,9:16:24.08:393,24,0	1/1:10,25:35:69.24:1134,69,0	1/1:3,9:12:21.07:345,21,0	1/1:1,17:18:41.42:688,41,0	1/1:10,26:36:69.24:1134,69,0	1/1:6,9:15:18.06:296,18,0	1/1:9,21:30:63.20:1001,63,0	1/1:4,23:26:63.22:1035,63,0	1/1:2,18:20:42.14:690,42,0
chr10	33013472	.	TTCATGAATGTC	T	1156.19	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.161;DP=659;FS=10.505;HRun=0;HaplotypeScore=253.5938;InbreedingCoeff=0.9973;MQ=87.88;MQ0=0;MQRankSum=-5.916;QD=64.23;ReadPosRankSum=1.398;VQSLOD=1.8980;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,14:18:36.12:1251,36,0	0/0:14,0:14:42.13:0,42,1924	0/0:30,0:30:90.27:0,90,4466	0/0:21,0:21:57.17:0,57,2611	0/0:38,0:38:99:0,111,4850	0/0:35,0:35:99:0,105,4972	0/0:17,0:17:51.18:0,51,2356	0/0:30,0:30:84.27:0,84,3193	0/0:21,0:21:63.22:0,63,2833	0/0:26,0:26:78.27:0,78,3721	0/0:22,0:22:63.19:0,63,2803	0/0:29,0:29:87.30:0,87,4035	0/0:29,0:29:87.30:0,87,3698	0/0:28,0:28:81.28:0,81,3729	0/0:26,0:26:78.24:0,78,3335	0/0:22,0:22:66.23:0,66,3116	0/0:15,0:15:45.15:0,45,2151	0/0:9,0:9:24.08:0,24,1101	0/0:19,0:19:57.20:0,57,2575	0/0:30,0:30:87.30:0,87,4227	0/0:15,0:15:45.14:0,45,2025	0/0:28,0:28:84.29:0,84,3970	0/0:31,0:31:90.31:0,90,4205	0/0:11,0:11:33.11:0,33,1569	0/0:29,0:28:84.29:0,84,3880	0/0:28,0:28:81.27:0,81,3519	0/0:27,0:27:81.26:0,81,3566	0/0:11,0:11:33.11:0,33,1442
chr10	33014505	.	C	CCAGAAAGAGAAA	11202.89	PASS	AB=1.000;AC=51;AF=0.911;AN=56;BaseQRankSum=3.092;DP=541;FS=10.555;HRun=0;HaplotypeScore=195.4931;InbreedingCoeff=0.6211;MQ=64.29;MQ0=6;MQRankSum=-4.756;QD=23.05;ReadPosRankSum=-0.565;VQSLOD=2.5559;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:29:6.04:68,0,6	1/1:13,0:13:14.25:223,14,0	0/0:18,0:15:33.09:0,33,686	0/0:37,0:24:62.34:0,62,1372	1/1:20,0:20:39:506,39,0	1/1:23,0:21:47.86:480,48,0	1/1:15,0:15:42.08:444,42,0	1/1:26,0:23:62.98:692,63,0	1/1:23,0:23:59.69:712,60,0	1/1:19,0:19:56.92:866,57,0	1/1:19,0:19:44.14:392,44,0	1/1:21,0:21:59.92:667,60,0	1/1:21,0:21:62.94:608,63,0	1/1:14,0:14:36.07:463,36,0	1/1:16,0:16:6.49:269,6,0	1/1:21,0:19:9.03:335,9,0	1/1:13,0:13:32.92:468,33,0	1/1:4,0:4:11.92:89,12,0	1/1:18,0:17:46.40:511,46,0	1/1:27,0:27:74.92:822,75,0	1/1:15,0:15:38.43:401,38,0	1/1:19,0:18:29.87:412,30,0	1/1:17,0:17:35.58:404,36,0	1/1:21,0:21:6.01:100,6,0	1/1:26,0:26:3.01:111,3,0	1/1:22,0:22:53.99:705,54,0	1/1:4,9:15:3.48:165,3,0	1/1:9,0:9:24.02:288,24,0
chr10	33014506	.	C	CAGAAAGAGAAAG	23967.48	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=1.011;DP=672;FS=8.369;HRun=0;HaplotypeScore=242.4613;InbreedingCoeff=0.8983;MQ=58.92;MQ0=6;MQRankSum=-4.296;QD=38.78;ReadPosRankSum=-1.569;VQSLOD=3.0770;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:29:13.06:187,13,0	1/1:3,10:17:17.64:381,18,0	0/0:17,0:14:33.09:0,33,553	0/0:37,0:24:50.35:0,50,978	1/1:8,12:26:47.59:705,48,0	1/1:29,0:27:64:1104,64,0	1/1:19,0:19:54.17:1246,54,0	1/1:31,0:28:78.26:1699,78,0	1/1:35,0:35:84.54:1890,85,0	1/1:7,15:25:75.21:1716,75,0	1/1:18,2:24:47.71:639,48,0	1/1:27,0:27:68.58:1279,69,0	1/1:26,0:26:75.64:1418,76,0	1/1:18,0:18:40.36:769,40,0	1/1:6,1:20:9.50:483,9,0	1/1:13,14:31:36.59:1459,37,0	1/1:18,0:18:44.31:821,44,0	1/1:6,0:6:16.58:277,17,0	1/1:22,0:21:53.45:934,53,0	1/1:29,0:29:78.17:1165,78,0	1/1:18,0:18:38.90:523,39,0	1/1:7,12:25:35.89:552,36,0	1/1:20,0:20:35.79:543,36,0	1/1:25,0:24:7.05:128,7,0	1/1:6,24:31:12.04:444,12,0	1/1:28,0:28:67.20:1715,67,0	1/1:21,1:22:29.46:1126,29,0	1/1:13,0:13:33.11:763,33,0
chr10	33014508	.	G	GAAAGAG	13518.25	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=5.461;DP=664;FS=12.268;HRun=0;HaplotypeScore=229.2244;InbreedingCoeff=0.8793;MQ=57.27;MQ0=7;MQRankSum=-3.921;QD=22.09;ReadPosRankSum=0.052;VQSLOD=2.8526;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,0:31:15.29:96,15,0	1/1:13,0:13:11.18:157,11,0	0/0:17,0:13:33.05:0,33,334	0/0:35,0:22:48.73:0,49,527	1/1:21,0:21:31.96:320,32,0	1/1:27,0:25:60.31:604,60,0	1/1:20,0:20:53.38:692,53,0	1/1:32,0:29:79.21:968,79,0	1/1:35,0:36:81.79:1061,82,0	1/1:20,0:22:62.97:867,63,0	1/1:24,0:24:46.14:391,46,0	1/1:26,0:26:64.77:836,65,0	1/1:29,0:29:73.98:775,74,0	1/1:16,0:16:39.23:418,39,0	1/1:19,0:19:9.03:242,9,0	1/1:31,0:28:36.12:881,36,0	1/1:19,0:19:41.04:399,41,0	1/1:7,0:7:16.79:178,17,0	1/1:23,0:22:49.63:440,50,0	1/1:28,0:28:74.12:629,74,0	1/1:17,0:17:32.19:307,32,0	1/1:22,0:21:20.65:205,21,0	1/1:21,0:21:33.92:318,34,0	1/1:9,0:25:6.12:80,6,0	1/1:32,0:32:12.04:256,12,0	1/1:9,1:34:82.15:1332,82,0	1/1:22,0:22:28.91:629,29,0	1/1:13,0:13:33:439,33,0
chr10	33016085	.	AT	A	2561.24	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=10.682;DP=726;FS=8.109;HRun=5;HaplotypeScore=69.9014;InbreedingCoeff=0.9956;MQ=88.73;MQ0=0;MQRankSum=-3.018;QD=29.44;ReadPosRankSum=0.760;VQSLOD=3.9943;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,99,1322	0/0:16,0:16:48.16:0,48,657	0/0:35,0:35:90.29:0,90,1209	0/0:23,0:23:60.07:0,60,764	0/0:34,0:34:99:0,99,1346	0/0:27,0:27:75.25:0,75,1025	0/0:18,0:18:48.15:0,48,640	0/0:33,0:33:84.27:0,84,1134	0/0:27,0:27:72.24:0,72,982	0/0:25,0:25:66.22:0,66,903	0/0:22,0:22:66.21:0,66,887	1/1:0,23:23:66.19:749,66,0	0/0:30,0:30:87.28:0,87,1174	1/1:0,24:24:63.18:714,63,0	0/0:34,0:34:99:0,102,1364	0/0:26,0:26:72.23:0,72,967	0/0:18,0:18:54.18:0,54,737	0/0:18,0:18:51.14:0,51,677	0/0:25,0:25:72.24:0,72,985	0/0:31,0:31:90.30:0,90,1231	0/0:29,0:29:81.25:0,81,1088	0/0:32,0:32:93.31:0,93,1271	1/1:0,23:23:62.75:714,63,0	1/1:1,16:17:48.14:544,48,0	0/0:35,0:35:99:0,105,1404	0/0:29,0:29:87.28:0,87,1176	0/0:32,0:32:92.32:0,92,1218	0/0:5,0:5:15.05:0,15,205
chr10	33016290	.	TA	T	15914.98	PASS	AC=46;AF=0.852;AN=54;BaseQRankSum=8.399;DP=671;FS=3.335;HRun=7;HaplotypeScore=68.6459;InbreedingCoeff=0.9979;MQ=72.47;MQ0=0;MQRankSum=-2.295;QD=27.21;ReadPosRankSum=2.374;VQSLOD=5.7665;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,105,1319	1/1:0,9:9:24.05:245,24,0	0/0:13,0:13:30.09:0,30,370	0/0:8,0:8:21.06:0,21,250	1/1:6,42:48:99:1308,129,0	1/1:2,22:23:57.13:582,57,0	1/1:0,12:12:36.08:367,36,0	1/1:2,30:32:90.16:904,90,0	1/1:1,25:26:69.16:704,69,0	1/1:3,29:32:87.17:879,87,0	1/1:1,25:26:66.15:673,66,0	1/1:1,25:26:69.16:704,69,0	1/1:1,22:23:63.14:643,63,0	1/1:1,28:29:81.18:826,81,0	0/0:27,0:27:75.24:0,75,942	1/1:1,28:29:78.18:796,78,0	1/1:3,13:16:39.09:398,39,0	1/1:1,17:18:42.09:428,42,0	1/1:1,16:17:48.11:489,48,0	1/1:1,32:33:93.21:949,93,0	1/1:4,10:14:30.06:306,30,0	1/1:1,25:26:72.16:735,72,0	1/1:3,25:28:72.16:735,72,0	1/1:1,16:17:45.10:459,45,0	1/1:2,34:36:96.22:979,96,0	1/1:0,26:26:78.18:796,78,0	1/1:0,38:38:99:1010,99,0	./.
chr10	33017748	.	T	TAC	5626.82	PASS	AB=0.994;AC=37;AF=0.661;AN=56;BaseQRankSum=-7.579;DP=666;FS=36.548;HRun=0;HaplotypeScore=157.3263;InbreedingCoeff=0.0881;MQ=60.57;MQ0=4;MQRankSum=-0.895;QD=9.54;ReadPosRankSum=4.409;VQSLOD=2.4025;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:18:25.64:0,26,169	1/1:13,1:14:13.88:260,14,0	0/0:25,0:23:31.37:0,31,330	0/0:14,0:11:14.82:0,15,130	0/1:23,0:22:2.61:158,0,3	0/1:28,0:27:55.63:149,0,56	0/1:20,0:20:2.99:185,0,3	1/1:32,0:31:59.48:464,59,0	0/1:29,0:29:44.70:192,0,45	1/1:9,24:32:62.13:686,62,0	1/1:19,4:23:26.16:441,26,0	1/1:22,0:23:11.42:69,11,0	0/1:28,0:28:44.28:186,0,44	1/1:19,0:19:8.59:69,9,0	1/1:28,0:28:59.21:329,59,0	0/1:21,0:21:39.99:79,0,40	0/1:28,0:28:29.32:185,0,29	0/1:13,0:14:12.78:45,0,13	1/1:21,0:21:37.09:299,37,0	0/1:43,0:43:17.80:249,0,18	1/1:21,0:21:1.06:178,1,0	1/1:29,0:29:9.42:280,9,0	1/1:17,0:16:31.63:226,32,0	0/0:18,0:18:1.25:0,1,3	0/1:34,0:34:27.06:165,0,27	1/1:27,0:27:38.45:328,38,0	0/1:24,0:24:4.38:213,0,4	1/1:11,0:11:26.94:192,27,0
chr10	33017758	.	C	CACACAGAGAGAGAG	9338.04	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=-16.706;DP=662;FS=106.744;HRun=0;HaplotypeScore=289.4791;InbreedingCoeff=-0.4302;MQ=55.38;MQ0=6;MQRankSum=2.578;QD=16.04;ReadPosRankSum=-0.428;VQSLOD=-0.5248;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:27.09:0,27,405	0/1:14,0:14:99:312,0,297	0/0:19,0:16:28.17:0,28,587	0/0:11,0:8:14.53:0,15,176	0/1:21,0:22:99:365,0,506	0/1:28,0:28:99:253,0,1020	0/1:20,0:20:99:409,0,280	1/1:29,0:28:4.33:867,4,0	0/1:27,0:27:99:367,0,774	0/1:31,0:30:99:585,0,306	0/1:22,0:21:99:279,0,431	1/1:2,1:25:8.95:572,9,0	0/1:27,0:27:99:423,0,795	1/1:3,14:25:5.85:422,6,0	0/0:18,0:28:10.69:0,11,1061	0/1:15,0:17:99:150,0,681	0/1:26,0:28:99:366,0,536	0/1:12,0:14:99:231,0,322	0/1:27,0:27:99:544,0,313	0/1:38,0:41:99:352,0,1317	0/1:18,0:18:99:275,0,347	0/1:25,0:26:99:496,0,729	1/1:19,0:19:26.60:403,27,0	1/1:6,11:19:2.69:8,3,0	0/1:32,0:34:99:417,0,866	0/1:27,0:29:99:496,0,555	0/1:20,0:24:99:408,0,633	0/1:10,0:12:50.86:337,0,51
chr10	33018171	.	A	ATTGT	13945.91	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-10.620;DP=470;FS=2.366;HRun=0;HaplotypeScore=64.9381;InbreedingCoeff=0.9597;MQ=66.57;MQ0=0;MQRankSum=-4.094;QD=40.07;ReadPosRankSum=1.339;VQSLOD=5.0713;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:36.12:0,36,581	1/1:2,4:6:12.04:293,12,0	0/0:17,0:15:24.08:0,24,366	0/0:16,0:17:23.88:0,24,388	1/1:9,17:26:54.15:1257,54,0	1/1:12,19:31:49.41:1177,49,0	1/1:5,4:10:18.06:434,18,0	1/1:25,12:40:51.15:1125,51,0	1/1:4,13:17:36.12:880,36,0	1/1:6,7:13:21.07:488,21,0	1/1:8,8:16:27.09:652,27,0	0/0:8,0:8:15.05:0,15,247	1/1:5,10:15:33.11:805,33,0	0/0:17,0:17:33.11:0,33,542	0/0:19,0:19:33.11:0,33,543	1/1:5,9:15:12.04:293,12,0	1/1:3,6:9:15.05:366,15,0	1/1:5,7:12:24.97:555,25,0	1/1:8,7:15:21.06:465,21,0	1/1:6,11:19:15.07:750,15,0	1/1:6,7:13:21.07:514,21,0	1/1:3,2:5:6.02:147,6,0	0/0:12,0:12:27.09:0,27,444	0/0:13,0:13:33.11:0,33,543	1/1:8,9:19:27.09:643,27,0	1/1:6,16:23:54.19:1267,54,0	1/1:5,11:18:30.10:734,30,0	1/1:11,15:26:45.15:1100,45,0
chr10	33021155	.	AATATATATATATATATATATATAT	A	6676.90	PASS	AB=0.854;AC=28;AF=0.824;AN=34;BaseQRankSum=1.150;DP=213;FS=0.000;HRun=0;HaplotypeScore=133.9442;InbreedingCoeff=0.1475;MQ=77.19;MQ0=1;MQRankSum=-2.865;QD=39.98;ReadPosRankSum=2.787;VQSLOD=3.7004;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	1/1:0,2:3:9.03:545,9,0	./.	0/0:5,0:3:2.04:0,2,6	1/1:1,5:6:9.03:545,9,0	1/1:5,5:10:6.02:378,6,0	1/1:5,0:6:3.01:168,3,0	0/1:25,0:25:13.90:41,0,14	./.	1/1:11,0:11:3.01:44,3,0	1/1:7,3:11:6.02:356,6,0	0/0:2,0:2:3:0,3,25	./.	./.	./.	1/1:2,0:2:3.01:46,3,0	1/1:13,2:17:15.05:751,15,0	./.	1/1:10,1:11:3.01:189,3,0	1/1:4,4:10:12.04:713,12,0	./.	./.	./.	./.	1/1:8,8:17:12.04:734,12,0	0/1:10,2:17:6.16:871,0,6	1/1:10,6:18:21.07:1127,21,0	1/1:0,0:3:3.01:168,3,0
chr10	33022087	.	AAC	A	86.50	PASS	AB=0.769;AC=1;AF=0.018;AN=56;BaseQRankSum=5.769;DP=214;FS=4.509;HRun=0;HaplotypeScore=45.8136;InbreedingCoeff=-0.0634;MQ=103.87;MQ0=2;MQRankSum=0.736;QD=4.32;ReadPosRankSum=-2.717;VQSLOD=1.1221;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:8:18.06:0,18,323	0/0:1,0:1:3.01:0,3,58	0/1:13,6:19:99:160,0,466	0/0:14,0:14:35.96:0,36,653	0/0:9,0:9:27.09:0,27,524	0/0:9,0:9:27.09:0,27,508	0/0:2,0:2:6.02:0,6,116	0/0:27,0:27:40.35:0,40,1218	0/0:5,0:5:11.66:0,12,231	0/0:7,0:7:21.07:0,21,406	0/0:7,0:7:16.85:0,17,308	0/0:8,0:8:21.07:0,21,386	0/0:7,0:7:16.71:0,17,312	0/0:3,0:3:8.77:0,9,120	0/0:3,0:3:6.02:0,6,116	0/0:7,0:7:7.20:0,7,333	0/0:11,0:11:14.04:0,14,449	0/0:10,0:10:23.11:0,23,461	0/0:3,0:3:9.03:0,9,173	0/0:4,0:4:7.06:0,7,158	0/0:2,0:2:6.02:0,6,103	0/0:4,0:4:9.03:0,9,174	0/0:2,0:2:3.01:0,3,58	0/0:2,0:2:6.02:0,6,116	0/0:12,0:12:33.11:0,33,624	0/0:7,0:7:21.07:0,21,398	0/0:12,0:12:30.96:0,31,595	0/0:8,0:6:18.06:0,18,345
chr10	33022092	.	C	CTAATAATAATAATAATAA	6337.02	PASS	AC=36;AF=0.900;AN=40;BaseQRankSum=-3.220;DP=224;FS=6.323;HRun=0;HaplotypeScore=108.2765;InbreedingCoeff=0.2830;MQ=89.47;MQ0=2;MQRankSum=-1.471;QD=37.72;ReadPosRankSum=-1.938;VQSLOD=2.9644;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:11:7.27:0,7,134	1/1:2,0:2:3.01:76,3,0	0/0:15,0:14:0.89:0,1,2	./.	1/1:8,2:13:11.96:257,12,0	./.	./.	1/1:34,0:33:48.14:1436,48,0	1/1:3,0:5:3.01:235,3,0	1/1:8,0:8:3:25,3,0	1/1:2,0:5:6.02:349,6,0	1/1:9,0:9:6.02:127,6,0	1/1:5,1:6:3.01:253,3,0	1/1:2,0:3:6.02:133,6,0	./.	1/1:7,0:7:6.02:318,6,0	1/1:12,0:12:18.03:549,18,0	1/1:9,0:9:9.03:355,9,0	1/1:6,0:6:9.03:289,9,0	1/1:3,0:3:3.01:253,3,0	./.	./.	./.	./.	1/1:13,0:13:9.02:236,9,0	1/1:9,1:10:12.04:598,12,0	1/1:12,0:13:12.03:595,12,0	1/1:7,1:8:3.01:253,3,0
chr10	33022633	.	AG	A	3110.90	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-4.413;DP=731;FS=0.000;HRun=1;HaplotypeScore=104.3621;InbreedingCoeff=0.9914;MQ=89.35;MQ0=0;MQRankSum=-1.356;QD=36.17;ReadPosRankSum=3.239;VQSLOD=3.6179;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:78.23:0,78,1170	0/0:16,0:16:48.15:0,48,729	0/0:20,0:20:53.37:0,53,871	0/0:37,0:37:99:0,108,1602	0/0:40,0:40:99:0,120,1763	0/0:25,0:25:75.23:0,75,1125	0/0:17,0:17:51.13:0,51,728	0/0:39,0:39:99:0,114,1685	0/0:22,0:22:66.22:0,66,1033	0/0:36,0:36:99:0,108,1629	0/0:17,0:17:51.17:0,51,798	1/1:0,29:29:75.25:1049,75,0	0/0:35,0:35:99:0,105,1639	1/1:0,20:20:48.15:671,48,0	0/0:38,0:38:99:0,114,1757	0/0:31,0:30:93.32:0,93,1449	0/0:20,0:20:60.20:0,60,936	0/0:14,0:14:39.11:0,39,578	0/0:28,0:28:84.25:0,84,1233	0/0:37,1:38:72.44:0,72,1693	0/0:17,0:17:51.16:0,51,773	0/0:37,0:37:99:0,111,1676	1/1:0,17:17:51.17:713,51,0	1/1:0,20:20:60.20:839,60,0	0/0:31,0:31:93.30:0,93,1433	0/0:21,0:21:63.19:0,63,941	0/0:36,0:36:99:0,108,1655	0/0:4,0:4:12.01:0,12,143
chr10	33023823	.	AGTGT	A	2312.28	PASS	AB=0.951;AC=41;AF=0.854;AN=48;BaseQRankSum=-0.703;DP=573;FS=1.076;HRun=0;HaplotypeScore=112.0509;InbreedingCoeff=0.1886;MQ=63.84;MQ0=21;MQRankSum=-3.727;QD=5.05;ReadPosRankSum=0.174;VQSLOD=2.4386;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:32,0:30:54.87:55,0,212	1/1:8,5:14:11.94:141,12,0	./.	./.	1/1:11,5:15:3.87:48,4,0	0/1:23,1:24:15.18:31,0,15	./.	./.	1/1:13,3:16:14.97:200,15,0	1/1:25,2:25:6.02:92,6,0	1/1:13,0:13:3.46:25,3,0	1/1:9,0:21:27.03:251,27,0	1/1:8,5:13:12.51:167,13,0	1/1:10,0:20:8.75:68,9,0	1/1:16,7:23:12.03:166,12,0	1/1:15,2:17:18.51:226,19,0	1/1:22,11:33:17.85:275,18,0	0/0:12,0:12:4.82:0,5,46	1/1:19,1:21:8.50:100,8,0	1/1:18,8:27:9.49:113,9,0	1/1:28,0:25:3.48:45,3,0	0/0:5,0:10:5.41:0,5,65	1/1:7,0:10:6.01:56,6,0	1/1:18,0:28:2.89:28,3,0	1/1:21,5:26:6.02:92,6,0	1/1:15,2:19:12.03:148,12,0	0/1:22,2:24:3.13:82,0,3	1/1:2,0:3:3:28,3,0
chr10	33024734	.	GTTGC	G	3510.33	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=9.752;DP=577;FS=2.345;HRun=0;HaplotypeScore=101.1919;InbreedingCoeff=0.9921;MQ=89.25;MQ0=0;MQRankSum=-3.253;QD=45.00;ReadPosRankSum=1.835;VQSLOD=4.0062;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,14:14:27.09:497,27,0	0/0:12,0:12:36.12:0,36,928	0/0:24,0:24:59.25:0,59,1370	0/0:27,0:27:63.21:0,63,1564	0/0:25,0:25:69.19:0,69,1758	0/0:22,0:22:60.21:0,60,1541	0/0:19,0:19:54.14:0,54,1330	0/0:23,0:23:54.18:0,54,1374	0/0:23,0:23:66.17:0,66,1628	0/0:23,0:23:60.21:0,60,1567	0/0:19,0:19:57.20:0,57,1457	1/1:0,19:20:54.18:973,54,0	0/0:35,0:35:99:0,99,2594	1/1:3,15:18:48.16:883,48,0	0/0:33,0:33:93.28:0,93,2396	0/0:25,0:25:75.25:0,75,1892	0/0:13,0:13:39.11:0,39,971	0/0:9,0:9:27.09:0,27,691	0/0:23,0:23:66.20:0,66,1635	0/0:18,0:18:51.17:0,51,1311	0/0:25,0:25:69.21:0,69,1616	0/0:16,0:16:45.10:0,45,1054	1/1:3,9:12:27.09:496,27,0	1/1:0,14:14:36.12:662,36,0	0/0:17,0:17:51.12:0,51,1186	0/0:21,0:21:57.20:0,57,1457	0/0:43,0:43:99:0,123,3097	0/0:4,0:4:12.04:0,12,314
chr10	33025098	.	CA	C	496.56	PASS	AC=20;AF=0.909;AN=22;BaseQRankSum=-2.949;DP=75;FS=11.139;HRun=1;HaplotypeScore=25.7874;InbreedingCoeff=0.3600;MQ=89.78;MQ0=34;MQRankSum=-1.447;QD=12.41;ReadPosRankSum=0.890;VQSLOD=0.6476;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	1/1:1,3:4:7.69:89,8,0	1/1:10,0:2:0.68:2,1,0	0/0:13,0:7:6.40:0,6,67	1/1:0,2:2:2.96:19,3,0	./.	./.	./.	./.	1/1:0,1:1:3.01:38,3,0	1/1:0,6:6:17.89:159,18,0	./.	./.	./.	./.	./.	./.	./.	./.	1/1:1,5:6:10.12:74,10,0	./.	1/1:1,1:1:3.01:36,3,0	1/1:0,4:4:11.82:75,12,0	./.	1/1:0,3:3:8.92:71,9,0	1/1:1,1:1:2.96:19,3,0	./.	./.
chr10	33025870	.	T	TTACATA	21791.08	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-6.521;DP=413;FS=9.428;HRun=0;HaplotypeScore=53.4024;InbreedingCoeff=0.7458;MQ=69.49;MQ0=2;MQRankSum=-7.230;QD=55.87;ReadPosRankSum=2.938;VQSLOD=4.1588;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,11:18:18.06:642,18,0	1/1:0,2:2:3.01:107,3,0	0/0:14,0:13:33.11:0,33,770	0/0:9,0:9:23.91:0,24,492	1/1:2,21:25:42.14:1496,42,0	1/1:1,18:23:36.12:1285,36,0	1/1:2,7:11:12.04:426,12,0	1/1:4,17:27:72.07:1808,72,0	1/1:0,9:15:24.08:845,24,0	1/1:2,11:17:29.93:816,30,0	1/1:0,18:21:33.11:1177,33,0	1/1:0,9:11:9.03:318,9,0	1/1:4,5:8:12.04:426,12,0	1/1:1,11:14:21.07:749,21,0	1/1:0,12:14:30.10:1074,30,0	1/1:0,8:12:18.06:645,18,0	1/1:0,13:14:24.08:859,24,0	1/1:4,11:15:24.08:791,24,0	1/1:1,9:14:39.07:1072,39,0	1/1:2,15:20:30.10:1070,30,0	1/1:6,0:6:9:96,9,0	1/1:1,10:12:21.07:750,21,0	1/1:0,8:13:21.07:746,21,0	1/1:1,3:4:9.03:322,9,0	1/1:0,16:21:36.12:1280,36,0	1/1:0,20:23:60.17:2025,60,0	1/1:2,14:23:24.05:860,24,0	1/1:0,3:5:3.01:108,3,0
chr10	33028955	.	G	GCACACA	305.74	PASS	AC=6;AF=0.136;AN=44;BaseQRankSum=1.560;DP=391;FS=0.000;HRun=0;HaplotypeScore=84.8802;InbreedingCoeff=0.6017;MQ=62.62;MQ0=8;MQRankSum=-4.487;QD=5.77;ReadPosRankSum=-2.677;VQSLOD=1.1099;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:22:5.66:0,6,33	./.	./.	./.	0/0:17,0:17:24.08:0,24,434	0/0:14,0:14:15.04:0,15,266	0/0:15,0:15:20.50:0,20,363	./.	0/0:13,0:13:15.05:0,15,263	0/0:11,0:11:5.75:0,6,72	0/0:13,0:13:9.01:0,9,134	1/1:10,0:10:9.03:182,9,0	./.	1/1:8,9:18:5.96:149,6,0	0/0:10,0:12:9.03:0,9,134	0/0:17,0:17:11.29:0,11,489	0/0:27,0:26:35.56:0,36,663	0/0:16,0:14:15.04:0,15,238	0/0:8,0:6:6.02:0,6,121	0/0:4,0:4:6.02:0,6,104	0/0:19,0:17:12.04:0,12,220	0/0:7,0:7:9.03:0,9,171	./.	1/1:24,1:25:3.01:86,3,0	0/0:8,0:8:9.03:0,9,181	0/0:10,0:10:21.07:0,21,392	0/0:13,0:14:20.84:0,21,319	0/0:4,0:4:6.02:0,6,116
chr10	33028996	.	C	CACACAG	462.28	PASS	AB=0.768;AC=6;AF=0.111;AN=54;BaseQRankSum=-0.531;DP=426;FS=0.877;HRun=0;HaplotypeScore=100.3332;InbreedingCoeff=0.4349;MQ=57.15;MQ0=18;MQRankSum=-0.160;QD=5.38;ReadPosRankSum=0.570;VQSLOD=1.3149;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:12:5.97:0,6,44	0/0:6,0:6:11.72:0,12,41	0/0:12,0:7:10.99:0,11,112	0/0:11,0:9:5.15:0,5,71	0/0:21,0:21:37.89:0,38,434	0/0:16,0:14:29.94:0,30,230	0/0:21,0:20:37.07:0,37,435	0/0:11,0:11:7.66:0,8,40	0/0:13,0:13:27.86:0,28,272	0/0:13,0:13:19.88:0,20,133	0/0:15,0:14:21.66:0,22,172	1/1:3,1:18:6.02:142,6,0	0/0:6,0:6:6.48:0,6,20	1/1:21,0:20:32.35:321,32,0	0/1:16,0:14:30.86:31,0,64	0/0:21,0:20:25.92:0,26,452	0/0:34,0:33:55.28:0,55,686	0/0:18,0:15:25.94:0,26,279	0/0:18,0:17:22.15:0,22,188	0/0:11,0:10:12.68:0,13,108	0/0:12,0:10:14.26:0,14,207	0/0:9,0:9:17.73:0,18,186	./.	0/1:4,17:30:38.55:95,0,39	0/0:11,0:10:13.11:0,13,194	0/0:15,0:14:29.85:0,30,335	0/0:20,0:20:40.74:0,41,338	0/0:2,0:2:6.02:0,6,85
chr10	33029009	.	A	AG	4605.53	PASS	AB=0.595;AC=39;AF=0.722;AN=54;BaseQRankSum=-4.321;DP=424;FS=0.766;HRun=8;HaplotypeScore=63.4917;InbreedingCoeff=0.6015;MQ=64.20;MQ0=20;MQRankSum=-2.726;QD=14.71;ReadPosRankSum=1.496;VQSLOD=4.7770;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,0:10:3.92:57,4,0	1/1:5,3:7:21.01:225,21,0	0/0:18,0:13:33.23:0,33,286	0/0:24,0:17:23.52:0,24,213	0/1:5,13:17:8.94:155,0,9	1/1:7,6:11:27.07:302,27,0	1/1:9,10:18:33.08:370,33,0	1/1:18,0:18:27.08:308,27,0	1/1:6,8:14:27.06:293,27,0	1/1:3,10:13:29.81:287,30,0	1/1:9,4:12:21.03:222,21,0	0/0:20,0:19:8.95:0,9,82	1/1:0,7:6:12.04:138,12,0	0/0:17,0:17:29.32:0,29,192	1/1:16,1:15:14.21:86,14,0	1/1:3,11:13:4.08:259,4,0	1/1:12,25:36:14.92:404,15,0	0/1:6,13:16:6.57:166,0,7	1/1:10,5:13:23.96:258,24,0	1/1:3,8:10:9.03:104,9,0	1/1:9,5:11:9.46:90,9,0	1/1:2,8:10:15:173,15,0	0/0:6,0:4:2.73:0,3,24	0/0:24,0:24:5.97:0,6,54	0/1:4,7:10:12.29:118,0,12	1/1:8,4:10:15.50:164,16,0	1/1:4,15:19:41.91:428,42,0	./.
chr10	33032200	.	T	TATAC	11422.72	PASS	AB=0.778;AC=48;AF=0.923;AN=52;BaseQRankSum=-4.343;DP=526;FS=3.099;HRun=0;HaplotypeScore=86.3403;InbreedingCoeff=0.3475;MQ=67.87;MQ0=3;MQRankSum=1.052;QD=24.62;ReadPosRankSum=-2.133;VQSLOD=4.2894;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:20:24.03:0,24,224	1/1:5,4:9:6.02:140,6,0	./.	./.	1/1:10,7:17:18.06:421,18,0	1/1:10,9:19:24.08:561,24,0	1/1:13,2:15:6.02:140,6,0	1/1:41,0:41:9:125,9,0	1/1:5,10:16:27.09:625,27,0	1/1:4,10:14:30.10:666,30,0	1/1:8,8:16:15.05:350,15,0	1/1:17,0:17:21.07:487,21,0	1/1:9,15:24:39.13:912,39,0	1/1:14,0:14:24.08:537,24,0	1/1:19,1:22:12.04:178,12,0	1/1:9,0:17:21.07:353,21,0	1/1:18,10:29:24.08:561,24,0	1/1:9,11:20:24.08:561,24,0	1/1:9,2:11:9.03:206,9,0	1/1:11,10:21:30.10:688,30,0	1/1:3,10:13:21.07:491,21,0	1/1:10,9:19:24.08:561,24,0	1/1:18,0:18:18.06:407,18,0	1/1:8,0:8:9.03:201,9,0	0/1:11,11:22:16.04:601,0,16	1/1:10,15:26:42.14:960,42,0	1/1:14,11:25:27.09:627,27,0	0/1:7,1:8:40.11:64,0,40
chr10	33032246	.	T	TAC	1992.52	PASS	AB=0.965;AC=24;AF=0.429;AN=56;BaseQRankSum=12.683;DP=464;FS=16.633;HRun=0;HaplotypeScore=92.4916;InbreedingCoeff=-0.6165;MQ=60.17;MQ0=14;MQRankSum=-0.465;QD=5.49;ReadPosRankSum=2.260;VQSLOD=1.5219;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:51.10:0,51,630	0/1:8,0:8:10.23:10,0,144	0/0:27,0:11:32.41:0,32,387	0/0:27,0:8:19.30:0,19,250	0/1:16,0:16:46.07:46,0,324	0/1:13,0:13:73.99:74,0,190	0/1:6,0:6:61.46:61,0,119	0/1:30,0:30:0.26:0,0,1045	0/1:17,0:17:76.72:77,0,229	0/1:20,0:19:98.14:98,0,358	0/1:11,0:11:46.31:46,0,114	0/1:9,5:14:82.54:192,0,83	0/1:23,0:23:99:126,0,217	1/1:6,6:11:3.35:259,3,0	0/1:13,0:13:38.83:39,0,119	0/1:12,0:12:40.95:165,0,41	0/1:18,0:18:90.46:90,0,103	0/1:22,0:21:64.99:65,0,319	0/0:16,0:16:4.81:0,5,457	0/1:15,0:15:99:103,0,185	0/1:17,0:17:59.88:60,0,236	0/1:12,0:11:62.78:83,0,63	0/1:8,4:12:83.38:192,0,83	0/1:4,2:6:32.40:89,0,32	0/1:19,0:19:76.15:76,0,317	0/1:25,0:25:99:121,0,390	0/1:22,0:21:74.95:75,0,270	0/0:11,0:11:18.98:0,19,439
chr10	33032248	.	T	TAC	627.15	PASS	AB=0.751;AC=5;AF=0.089;AN=56;BaseQRankSum=1.000;DP=443;FS=9.776;HRun=0;HaplotypeScore=91.6975;InbreedingCoeff=0.2934;MQ=60.94;MQ0=14;MQRankSum=-1.153;QD=14.58;ReadPosRankSum=-0.363;VQSLOD=2.6152;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:51.17:0,51,806	0/0:6,0:6:17.70:0,18,199	0/0:27,0:11:32.51:0,33,398	0/0:27,0:8:18.65:0,19,248	0/0:16,0:16:44.07:0,44,470	0/0:14,0:14:37.71:0,38,352	0/0:5,0:5:14.81:0,15,177	0/0:27,0:27:78.21:0,78,1190	0/0:18,0:18:44.06:0,44,430	0/0:19,0:18:52.82:0,53,588	0/0:11,0:11:31.92:0,32,278	0/1:9,5:14:53.96:213,0,54	0/0:20,0:20:54.86:0,55,471	1/1:4,6:9:9.05:262,9,0	0/0:10,0:10:23.27:0,23,234	0/0:9,0:9:12.51:0,13,120	0/0:17,0:17:32.18:0,32,267	0/0:22,0:21:46.09:0,46,493	0/0:17,0:17:47.79:0,48,617	0/0:15,0:15:41.74:0,42,371	0/0:14,0:14:37.66:0,38,384	0/0:12,0:11:29.16:0,29,221	0/1:9,4:13:36.96:206,0,37	0/1:4,2:6:22.38:64,0,22	0/0:19,0:19:52.89:0,53,550	0/0:23,0:23:67.44:0,67,681	0/0:22,0:21:49.75:0,50,494	0/0:11,0:11:32.98:0,33,488
chr10	33033616	.	G	GT	1716.91	PASS	AB=0.909;AC=9;AF=0.161;AN=56;BaseQRankSum=-8.457;DP=530;FS=3.226;HRun=8;HaplotypeScore=47.7356;InbreedingCoeff=0.8682;MQ=76.92;MQ0=0;MQRankSum=1.161;QD=22.89;ReadPosRankSum=2.160;VQSLOD=4.2462;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:27:70.95:0,71,619	0/0:12,0:12:23.98:0,24,214	0/0:21,0:20:32.95:0,33,289	0/1:9,1:9:13.56:14,0,83	0/0:30,0:30:80.98:0,81,727	0/0:20,0:20:44.95:0,45,402	0/0:15,0:15:39.01:0,39,357	0/0:32,0:32:74.89:0,75,661	0/0:14,0:14:32.99:0,33,302	0/0:26,0:26:72.04:0,72,659	0/0:24,0:24:66.01:0,66,596	1/1:1,16:17:48.14:554,48,0	0/0:22,0:22:59.97:0,60,539	1/1:3,22:25:60.18:691,60,0	0/0:11,0:11:33.02:0,33,302	0/0:16,0:16:42.02:0,42,384	0/0:25,0:25:68.99:0,69,619	0/0:8,0:8:18.01:0,18,165	0/0:20,0:20:50.05:0,50,445	0/0:26,0:26:69.01:0,69,624	0/0:9,0:9:27.01:0,27,247	0/0:8,0:8:24.01:0,24,220	1/1:2,11:13:33.10:381,33,0	1/1:1,9:10:21.06:242,21,0	0/0:14,0:14:42.02:0,42,384	0/0:21,0:21:63.03:0,63,577	0/0:43,0:42:99:0,120,1089	0/0:11,0:11:33.02:0,33,302
chr10	33033766	.	C	CGTGTGT	11216.40	PASS	AB=0.692;AC=47;AF=0.870;AN=54;BaseQRankSum=-3.804;DP=501;FS=1.254;HRun=0;HaplotypeScore=133.8915;InbreedingCoeff=0.5788;MQ=50.00;MQ0=4;MQRankSum=-2.434;QD=25.90;ReadPosRankSum=-0.201;VQSLOD=4.3669;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:23:15.93:0,16,202	1/1:3,4:8:17.58:523,18,0	0/0:24,0:14:15.01:0,15,222	0/0:15,0:7:2.98:0,3,63	1/1:15,14:32:12.04:394,12,0	1/1:8,11:23:18.06:532,18,0	1/1:10,4:15:12.04:334,12,0	1/1:26,7:31:39.12:963,39,0	1/1:4,5:9:9.03:296,9,0	1/1:6,8:16:36.09:831,36,0	1/1:16,10:27:32.53:1014,33,0	1/1:7,0:21:16.53:231,17,0	1/1:12,5:21:26.76:601,27,0	1/1:6,0:20:26.36:330,26,0	1/1:9,0:13:6.02:157,6,0	1/1:11,6:17:12.04:352,12,0	1/1:13,6:21:15.05:493,15,0	1/1:6,4:10:12.04:365,12,0	1/1:17,1:25:37:907,37,0	1/1:11,7:19:15.05:473,15,0	1/1:14,0:16:2.13:76,2,0	1/1:1,2:3:2.86:98,3,0	1/1:6,0:11:11.74:154,12,0	1/1:5,0:9:12.04:155,12,0	1/1:4,8:14:21.07:569,21,0	1/1:7,10:18:33.09:975,33,0	0/1:15,2:27:45.18:394,0,45	./.
chr10	33035803	.	A	ATC	614.61	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.522;DP=576;FS=1.740;HRun=0;HaplotypeScore=116.0072;InbreedingCoeff=0.9699;MQ=67.27;MQ0=7;MQRankSum=-0.611;QD=19.21;ReadPosRankSum=-1.033;VQSLOD=3.8566;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:83.82:0,84,687	0/0:5,0:5:15.01:0,15,147	0/0:38,0:27:65.04:0,65,695	0/0:45,0:30:77.39:0,77,815	0/0:15,0:15:35.97:0,36,315	0/0:12,0:12:26.99:0,27,244	0/0:20,0:19:51.03:0,51,493	0/0:23,0:23:51.43:0,51,455	0/0:18,0:18:51.04:0,51,502	0/0:17,0:17:48.07:0,48,462	0/0:13,0:13:32.97:0,33,320	0/0:21,0:21:48:0,48,421	0/0:16,0:16:42.03:0,42,402	0/0:15,0:15:35.98:0,36,306	1/1:26,5:32:49.01:709,49,0	0/0:13,0:13:29.87:0,30,254	0/0:30,0:30:80.93:0,81,735	0/0:20,0:20:53.81:0,54,453	0/0:13,0:12:33.04:0,33,318	0/0:25,0:25:50.89:0,51,419	0/0:24,0:24:41.94:0,42,358	0/0:21,0:21:54:0,54,503	0/0:14,0:14:32.98:0,33,283	0/0:20,0:20:50.98:0,51,438	0/0:21,0:21:42.04:0,42,419	0/0:10,0:10:21.02:0,21,207	0/0:24,0:24:59.92:0,60,533	0/0:6,0:6:17.88:0,18,136
chr10	33035806	.	TCA	T	2559.55	PASS	AB=1.000;AC=42;AF=0.778;AN=54;BaseQRankSum=1.130;DP=621;FS=14.972;HRun=0;HaplotypeScore=111.2752;InbreedingCoeff=0.0853;MQ=66.58;MQ0=8;MQRankSum=0.927;QD=5.06;ReadPosRankSum=1.429;VQSLOD=2.2680;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:32,0:45:20.07:98,20,0	1/1:8,0:8:8.62:55,9,0	0/0:37,0:26:0.47:0,0,1	./.	1/1:18,0:18:5.95:43,6,0	1/1:13,0:13:8.82:62,9,0	0/1:19,0:18:0.26:116,0,0	0/1:23,0:23:10.14:10,0,35	1/1:22,0:22:26.67:184,27,0	0/1:21,0:21:3.75:4,0,61	0/1:13,0:13:26.80:87,0,27	1/1:6,13:20:38.94:406,39,0	1/1:20,0:20:6.30:110,6,0	1/1:11,6:16:15.04:164,15,0	0/0:33,0:33:19.14:0,19,271	0/1:18,0:18:26.03:26,0,34	1/1:37,0:37:29.40:194,29,0	0/1:22,0:22:30.57:127,0,31	1/1:13,0:12:5.88:35,6,0	1/1:25,0:25:6.57:30,7,0	0/1:28,0:28:14.96:15,0,18	1/1:24,0:24:20.69:140,21,0	1/1:7,7:15:17.88:178,18,0	1/1:10,12:22:27.07:294,27,0	1/1:23,0:23:22.92:146,23,0	0/1:11,0:11:12.28:31,0,12	1/1:23,0:23:17.92:140,18,0	1/1:6,0:6:2.37:8,2,0
chr10	33035844	.	ACACACG	A	1618.46	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=-4.592;DP=833;FS=20.800;HRun=0;HaplotypeScore=175.9204;InbreedingCoeff=-0.2344;MQ=56.42;MQ0=37;MQRankSum=2.459;QD=5.07;ReadPosRankSum=-2.262;VQSLOD=1.0792;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:40:44.92:0,45,350	0/1:11,0:11:7.47:7,0,41	0/0:87,0:12:0.79:0,1,109	0/0:98,0:23:47.89:0,48,372	0/0:21,0:21:8.87:0,9,93	0/1:23,0:23:2.89:3,0,63	0/0:26,0:25:9:0,9,200	0/1:27,0:27:99:427,0,155	0/0:27,0:27:11.80:0,12,185	0/1:20,0:20:99:202,0,301	0/0:19,0:19:6.05:0,6,203	0/0:21,0:21:56.78:0,57,787	0/1:28,0:28:53.33:53,0,205	0/0:23,0:23:59.76:0,60,603	0/0:34,0:34:93.04:0,93,1712	0/1:24,0:24:15.28:15,0,107	0/1:34,0:34:19.71:20,0,200	0/1:27,0:27:99:131,0,488	0/1:15,0:13:99:128,0,109	1/1:2,22:24:9.03:201,9,0	0/0:38,0:36:9.02:0,9,133	0/1:34,0:34:99:282,0,208	0/0:20,0:20:50.67:0,51,565	0/0:29,0:29:72.01:0,72,870	0/0:30,0:30:2.81:0,3,131	0/1:18,0:18:99:204,0,116	0/1:26,0:26:28.12:28,0,126	0/1:8,0:8:58.99:69,0,59
chr10	33035846	.	ACACG	A	2951.33	PASS	AB=0.985;AC=31;AF=0.554;AN=56;BaseQRankSum=-2.218;DP=820;FS=9.820;HRun=0;HaplotypeScore=153.0159;InbreedingCoeff=0.2019;MQ=57.93;MQ0=37;MQRankSum=3.240;QD=6.27;ReadPosRankSum=0.672;VQSLOD=1.9626;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:34,0:33:99:129,0,161	1/1:10,1:11:4.48:64,4,0	0/0:88,0:12:0.32:0,0,108	0/0:99,0:26:37.72:0,38,368	1/1:21,0:21:0.88:2,1,0	1/1:22,1:23:3.48:61,3,0	0/1:26,1:26:15.12:58,0,15	0/1:27,0:27:7.96:456,0,8	1/1:26,1:27:6.78:69,7,0	0/1:22,0:22:54.62:346,0,55	0/1:15,1:16:39.38:56,0,39	0/0:21,0:21:34.43:0,34,392	1/1:26,1:27:0.58:132,1,0	0/0:21,0:21:59.62:0,60,450	0/0:35,0:35:95.50:0,95,1264	0/1:23,1:24:36.31:67,0,36	1/1:30,3:33:15.32:210,15,0	0/1:26,0:26:71.31:206,0,71	1/1:15,0:13:27.83:213,28,0	1/1:23,0:23:9.02:104,9,0	0/0:33,0:31:2.30:0,2,23	1/1:33,1:34:53.69:448,54,0	0/0:22,0:22:30.10:0,30,363	0/0:28,0:28:63.18:0,63,503	1/1:29,1:30:8.85:117,9,0	0/1:18,0:18:3.97:260,0,4	1/1:24,1:25:9.98:59,10,0	0/1:8,0:8:6.18:71,0,6
chr10	33035848	.	ACG	A	6138.18	PASS	AB=0.845;AC=42;AF=0.750;AN=56;BaseQRankSum=-4.451;DP=810;FS=8.214;HRun=0;HaplotypeScore=128.8906;InbreedingCoeff=0.3515;MQ=59.38;MQ0=37;MQRankSum=3.112;QD=11.20;ReadPosRankSum=1.276;VQSLOD=4.3331;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:35:52.23:0,52,354	1/1:2,10:12:9.74:121,10,0	0/0:90,0:14:0.12:0,0,108	0/0:99,0:26:49.75:0,50,388	1/1:0,21:21:5.99:91,6,0	1/1:1,20:21:9.02:118,9,0	1/1:2,24:25:21.06:303,21,0	1/1:10,18:28:74.84:636,75,0	1/1:1,26:27:27.03:394,27,0	1/1:18,1:19:50.08:468,50,0	0/1:2,14:16:2.54:191,0,3	0/1:22,0:22:99:101,0,120	1/1:4,21:25:23.82:269,24,0	0/1:23,0:23:12.25:12,0,316	0/0:34,0:34:77:0,77,821	0/1:3,20:23:5.73:76,0,6	1/1:5,27:32:30.55:402,31,0	1/1:18,6:24:62.83:621,63,0	1/1:2,11:11:32.91:303,33,0	1/1:23,0:23:8.49:61,8,0	1/1:3,28:30:3.01:46,3,0	1/1:23,8:31:71.91:708,72,0	0/1:23,0:23:18.74:19,0,248	0/1:27,0:27:52.45:52,0,253	1/1:2,29:31:23.99:320,24,0	1/1:0,18:18:41.63:384,42,0	1/1:1,24:25:26.82:327,27,0	1/1:6,0:7:12.81:116,13,0
chr10	33037307	.	C	CAAAAAACAAA	14450.19	PASS	AB=0.796;AC=51;AF=0.911;AN=56;BaseQRankSum=-3.369;DP=551;FS=3.491;HRun=0;HaplotypeScore=179.6162;InbreedingCoeff=0.4115;MQ=60.36;MQ0=6;MQRankSum=-4.061;QD=27.79;ReadPosRankSum=1.253;VQSLOD=3.9691;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,0:16:20.69:232,21,0	1/1:1,1:15:29.52:607,30,0	0/0:31,0:15:16.86:0,17,308	0/1:22,0:11:10.07:10,0,84	1/1:8,0:30:60.27:826,60,0	1/1:11,0:18:45.10:719,45,0	1/1:9,0:15:42.91:683,43,0	1/1:12,0:30:59.70:605,60,0	1/1:15,0:17:42.68:569,43,0	1/1:18,0:25:46.67:663,47,0	1/1:24,0:31:37.94:695,38,0	1/1:7,0:9:15.43:164,15,0	1/1:11,0:18:44.12:607,44,0	1/1:11,0:15:30.29:381,30,0	0/1:15,0:18:0.11:500,0,0	1/1:7,0:20:9.39:379,9,0	1/1:1,0:18:23.98:454,24,0	1/1:3,0:9:15.03:290,15,0	1/1:14,0:17:33.88:406,34,0	1/1:2,0:24:57.43:980,57,0	1/1:7,0:10:19.58:362,20,0	1/1:5,0:19:42:715,42,0	1/1:4,0:18:35.77:823,36,0	1/1:4,0:5:8.47:86,8,0	1/1:14,0:21:52.58:740,53,0	1/1:6,0:33:85.50:1496,85,0	0/1:10,0:33:3.46:359,0,3	1/1:3,0:4:11.36:102,11,0
chr10	33037310	.	AC	A	4947.66	PASS	AB=0.957;AC=52;AF=0.929;AN=56;BaseQRankSum=-3.585;DP=525;FS=2.797;HRun=1;HaplotypeScore=121.6352;InbreedingCoeff=0.3340;MQ=59.21;MQ0=6;MQRankSum=-0.831;QD=9.96;ReadPosRankSum=-2.323;VQSLOD=1.9394;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:16:8.10:108,8,0	1/1:10,1:11:17.75:101,18,0	0/0:28,0:13:33.87:0,34,258	0/1:19,2:10:28.41:28,0,66	1/1:30,0:30:59.30:374,59,0	1/1:20,0:19:25.42:194,25,0	1/1:20,0:19:36.26:256,36,0	1/1:28,2:28:63.56:450,64,0	1/1:16,0:16:35.95:238,36,0	1/1:25,0:24:43.01:293,43,0	1/1:27,1:28:49.69:336,50,0	1/1:8,1:9:15.92:138,16,0	1/1:18,0:18:28.11:171,28,0	1/1:12,3:15:22.82:188,23,0	0/1:21,0:19:83.37:93,0,83	1/1:18,0:18:16.94:85,17,0	1/1:19,0:19:20.45:122,20,0	1/1:7,0:7:3.43:29,3,0	1/1:19,0:18:24.30:189,24,0	1/1:22,0:21:36.65:244,37,0	1/1:10,0:10:23.50:141,23,0	1/1:15,0:15:28.10:172,28,0	1/1:14,1:15:28.31:144,28,0	1/1:5,0:5:5.18:45,5,0	1/1:22,0:21:44.90:274,45,0	1/1:31,0:31:53.52:405,54,0	1/1:30,0:30:19.93:106,20,0	1/1:4,0:4:3.54:22,4,0
chr10	33037311	.	C	CAAA	8867.06	PASS	AB=0.983;AC=52;AF=0.929;AN=56;BaseQRankSum=-3.426;DP=525;FS=5.314;HRun=11;HaplotypeScore=127.4750;InbreedingCoeff=0.4806;MQ=60.02;MQ0=6;MQRankSum=-4.520;QD=17.88;ReadPosRankSum=1.680;VQSLOD=3.0476;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:16:20.98:256,21,0	1/1:10,0:11:25.61:256,26,0	0/0:29,0:14:26.91:0,27,244	0/1:20,0:10:20.93:29,0,21	1/1:30,0:30:45.47:468,45,0	1/1:19,0:19:49.20:529,49,0	1/1:18,0:19:39.01:401,39,0	1/1:29,0:27:45.41:425,45,0	1/1:13,0:15:33.87:276,34,0	1/1:25,0:24:46.91:410,47,0	1/1:27,0:28:24.73:423,25,0	1/1:9,0:9:15.21:108,15,0	1/1:17,0:18:35.13:300,35,0	1/1:15,0:15:28.77:267,29,0	1/1:9,10:19:26.92:442,27,0	1/1:17,0:18:22.76:262,23,0	1/1:19,0:19:24:231,24,0	1/1:8,0:8:15:174,15,0	1/1:19,0:18:34.98:329,35,0	1/1:18,0:20:43.29:517,43,0	1/1:10,0:11:18.47:225,18,0	1/1:15,0:16:32.98:398,33,0	1/1:12,0:15:37.24:396,37,0	1/1:5,0:5:9.82:74,10,0	1/1:22,0:22:49.45:478,49,0	1/1:27,0:30:76.93:841,77,0	0/1:28,0:29:2.10:258,0,2	1/1:4,0:4:11.79:94,12,0
chr10	33038184	.	TACACACACACAC	T	1744.81	PASS	AB=0.929;AC=31;AF=0.620;AN=50;BaseQRankSum=2.594;DP=429;FS=2.329;HRun=0;HaplotypeScore=144.5306;InbreedingCoeff=0.0497;MQ=64.47;MQ0=9;MQRankSum=-0.896;QD=6.32;ReadPosRankSum=-0.225;VQSLOD=1.9953;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:17:2.72:43,3,0	0/1:7,0:7:36.70:44,0,37	./.	./.	0/1:13,5:18:32:32,0,45	0/1:19,0:17:6.85:78,0,7	0/1:21,0:21:58.35:58,0,63	0/0:17,0:17:2.19:0,2,4	1/1:15,0:14:1.28:43,1,0	0/1:9,0:9:19.98:20,0,30	./.	0/0:10,0:9:4.57:0,5,48	1/1:16,0:15:3.01:78,3,0	0/0:9,0:10:5.94:0,6,74	1/1:11,0:19:6.96:169,7,0	1/1:11,7:19:11.14:243,11,0	0/1:27,2:27:33.15:352,0,33	1/1:12,1:13:2.22:101,2,0	1/1:9,0:9:0.66:64,1,0	0/0:10,4:14:5.99:0,6,72	1/1:17,0:17:2.25:48,2,0	1/1:7,0:7:2.97:20,3,0	0/0:17,0:18:27.07:0,27,455	0/0:24,0:23:18.06:0,18,266	1/1:10,4:14:8.98:223,9,0	1/1:16,2:18:0.34:98,0,0	0/1:4,0:5:63.10:78,0,63	1/1:2,1:3:3.01:102,3,0
chr10	33041103	.	AT	A	1842.67	PASS	AB=1.000;AC=10;AF=0.179;AN=56;BaseQRankSum=12.863;DP=651;FS=0.975;HRun=7;HaplotypeScore=70.3395;InbreedingCoeff=0.8065;MQ=75.62;MQ0=0;MQRankSum=0.773;QD=18.07;ReadPosRankSum=-1.026;VQSLOD=3.3041;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:60.19:0,60,755	0/0:7,0:7:18.06:0,18,226	0/1:12,0:12:0.40:0,0,165	0/1:14,0:14:17.08:17,0,145	0/0:33,0:33:87.28:0,87,1095	0/0:24,0:24:72.20:0,72,879	0/0:11,0:11:33.09:0,33,401	0/0:35,0:35:99:0,99,1233	0/0:16,0:16:42.12:0,42,515	0/0:35,0:35:93.29:0,93,1159	0/0:30,0:30:84.27:0,84,1056	1/1:1,14:15:42.10:429,42,0	0/0:31,0:31:87.26:0,87,1069	1/1:2,27:29:75.17:765,75,0	0/0:29,0:29:72.22:0,72,890	0/0:22,0:22:60.19:0,60,755	0/0:18,0:18:45.14:0,45,566	0/0:21,0:21:54.17:0,54,679	0/0:29,0:29:78.24:0,78,969	0/0:40,0:40:99:0,120,1468	0/0:27,0:27:78.24:0,78,968	0/0:30,0:30:78.25:0,78,981	1/1:0,20:20:50.93:520,51,0	1/1:1,11:12:27.06:275,27,0	0/0:32,0:32:90.28:0,90,1122	0/0:24,0:24:63.19:0,63,779	0/0:25,0:25:72.23:0,72,906	0/0:8,0:8:21.07:0,21,264
chr10	33041660	.	GA	G	110.75	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.328;DP=551;FS=5.885;HRun=8;HaplotypeScore=51.0507;InbreedingCoeff=0.8329;MQ=77.99;MQ0=0;MQRankSum=-1.588;QD=11.07;ReadPosRankSum=0.321;VQSLOD=1.7823;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,9:10:21.03:203,21,0	0/0:11,0:11:27.08:0,27,326	0/0:13,0:13:24.07:0,24,277	0/0:15,0:15:18.42:0,18,215	0/0:31,0:31:90.25:0,90,1066	0/0:21,0:21:57.16:0,57,677	0/0:10,0:10:30.09:0,30,362	0/0:30,0:30:78.24:0,78,941	0/0:27,0:27:69.19:0,69,813	0/0:29,0:29:81.25:0,81,977	0/0:18,0:18:51.16:0,51,614	0/0:25,0:25:72.22:0,72,870	0/0:17,0:17:45.14:0,45,542	0/0:14,0:14:36.11:0,36,434	0/0:30,0:30:78.23:0,78,932	0/0:23,0:23:66.19:0,66,786	0/0:20,0:19:54.17:0,54,652	0/0:8,0:8:18.05:0,18,216	0/0:20,0:20:60.12:0,60,676	0/0:28,0:28:81.24:0,81,968	0/0:17,0:17:48.13:0,48,568	0/0:23,0:23:63.17:0,63,745	0/0:29,0:29:81.23:0,81,955	0/0:14,0:14:36.07:0,36,419	0/0:19,0:19:51.16:0,51,616	0/0:25,0:25:72.20:0,72,845	0/0:22,0:22:66.20:0,66,796	0/0:2,0:2:3.01:0,3,36
chr10	33043188	.	GCAGT	G	3937.04	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=9.740;DP=659;FS=4.368;HRun=0;HaplotypeScore=110.9013;InbreedingCoeff=0.9837;MQ=86.14;MQ0=0;MQRankSum=-3.576;QD=43.74;ReadPosRankSum=3.874;VQSLOD=3.9406;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,108,2779	0/0:10,0:10:30.10:0,30,822	0/0:24,0:24:66.22:0,66,1690	0/0:21,0:21:60.21:0,60,1472	0/0:35,0:34:96.33:0,96,2582	0/0:27,0:27:78.25:0,78,2071	0/0:22,0:22:66.23:0,66,1808	0/0:34,0:34:99:0,102,2622	0/0:16,0:16:48.13:0,48,1192	0/0:26,0:26:72.24:0,72,1920	0/0:26,0:26:72.20:0,72,1881	1/1:1,22:23:60.21:1152,60,0	0/0:31,0:31:93.27:0,93,2368	1/1:1,22:23:54.19:1046,54,0	0/0:30,0:30:81.28:0,81,2169	0/0:30,0:30:87.28:0,87,2261	0/0:26,0:26:78.21:0,78,1908	0/0:10,0:10:30.10:0,30,816	0/0:20,0:20:60.19:0,60,1469	0/0:23,0:23:66.19:0,66,1691	0/0:23,0:23:66.21:0,66,1736	0/0:17,0:17:51.18:0,51,1358	1/1:1,21:22:48.64:924,49,0	1/1:1,21:22:42.14:814,42,0	0/0:22,0:22:63.20:0,63,1636	0/0:29,0:29:87.22:0,87,2153	0/0:27,0:27:69.17:0,69,1823	0/0:3,0:3:9.03:0,9,247
chr10	33043464	.	T	TAAAC	34838.74	PASS	AB=1.000;AC=53;AF=0.946;AN=56;BaseQRankSum=-3.229;DP=542;FS=1.511;HRun=0;HaplotypeScore=67.8042;InbreedingCoeff=0.7536;MQ=61.53;MQ0=2;MQRankSum=-4.513;QD=64.88;ReadPosRankSum=2.533;VQSLOD=7.0249;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,14:16:33.11:888,33,0	1/1:0,7:7:21.07:566,21,0	0/0:5,0:5:12.03:0,12,194	0/1:8,0:8:1.64:2,0,140	1/1:5,33:38:99:2436,99,0	1/1:1,21:22:60.21:1616,60,0	1/1:0,10:10:30.10:809,30,0	1/1:5,29:35:99:2520,105,0	1/1:2,9:14:27.09:684,27,0	1/1:6,21:27:72.25:1870,72,0	1/1:3,25:29:84.28:1989,84,0	1/1:2,11:13:33.11:890,33,0	1/1:1,25:26:63.22:1613,63,0	1/1:2,15:16:39.13:1051,39,0	1/1:1,16:18:39.13:1003,39,0	1/1:2,22:23:60.21:1619,60,0	1/1:4,15:19:45.15:1170,45,0	1/1:1,12:14:36.12:970,36,0	1/1:5,17:24:69.22:1689,69,0	1/1:2,29:32:90.25:2192,90,0	1/1:0,5:6:9.03:199,9,0	1/1:0,16:17:51.17:1281,51,0	1/1:1,21:22:54.19:1452,54,0	1/1:0,12:13:24.08:648,24,0	1/1:5,26:31:72.25:1893,72,0	1/1:0,18:18:54.16:1366,54,0	1/1:2,25:29:75.26:2019,75,0	1/1:0,5:5:15.05:404,15,0
chr10	33044389	.	AACTATTCTCCTTTTCTT	A	4580.14	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=9.095;DP=743;FS=0.693;HRun=0;HaplotypeScore=329.4735;InbreedingCoeff=0.9450;MQ=69.65;MQ0=0;MQRankSum=-8.847;QD=147.75;ReadPosRankSum=4.169;VQSLOD=3.8016;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:90.31:0,90,7056	0/0:12,0:12:36.12:0,36,2580	0/0:20,0:19:57.19:0,57,3449	0/0:25,0:25:72.38:0,72,3506	0/0:30,0:30:90.30:0,90,7028	0/0:20,0:20:60.21:0,60,4881	0/0:25,0:25:75.26:0,75,5448	0/0:43,0:43:99:0,129,9707	0/0:27,0:27:81.28:0,81,6613	0/0:28,0:28:84.28:0,84,6817	0/0:27,0:27:81.27:0,81,5877	0/0:25,0:25:75.26:0,75,5522	0/0:34,0:34:99:0,102,7653	0/0:30,0:30:90.31:0,90,7154	1/1:0,31:31:90.31:4580,90,0	0/0:22,0:22:66.23:0,66,5110	0/0:26,0:26:78.27:0,78,5527	0/0:12,0:12:33.07:0,33,2367	0/0:27,0:27:81.26:0,81,5468	0/0:40,0:40:99:0,120,8924	0/0:37,0:37:99:0,111,8815	0/0:30,0:30:90.30:0,90,7160	0/0:24,0:24:72.25:0,72,5723	0/0:25,0:24:75.26:0,75,5951	0/0:29,0:29:87.30:0,87,7011	0/0:30,0:30:90.31:0,90,7306	0/0:31,0:31:93.32:0,93,7743	0/0:3,0:3:9.03:0,9,558
chr10	33044790	.	G	GAGAAAGAGGA	1625.38	PASS	AB=0.625;AC=27;AF=0.964;AN=28;BaseQRankSum=-1.734;DP=38;FS=0.000;HRun=0;HaplotypeScore=28.6636;InbreedingCoeff=-0.1751;MQ=81.96;MQ0=0;MQRankSum=-1.445;QD=56.05;ReadPosRankSum=-0.722;VQSLOD=2.4957;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	1/1:0,0:1:3.01:148,3,0	1/1:0,1:1:3.01:166,3,0	0/1:2,0:5:3.24:333,0,3	1/1:2,0:2:6:73,6,0	./.	1/1:2,0:2:3.01:65,3,0	./.	./.	./.	1/1:1,0:1:3:25,3,0	1/1:3,0:3:6.01:161,6,0	./.	./.	./.	./.	./.	1/1:3,0:3:2.99:24,3,0	./.	./.	1/1:2,0:2:5.98:61,6,0	1/1:1,0:2:6.01:114,6,0	1/1:0,0:1:3.01:93,3,0	./.	1/1:1,0:2:6:169,6,0	1/1:1,0:2:6.01:176,6,0	1/1:1,0:2:3.01:92,3,0	./.
chr10	33045513	.	TAC	T	175.09	PASS	AB=0.955;AC=11;AF=0.220;AN=50;BaseQRankSum=4.391;DP=348;FS=0.000;HRun=0;HaplotypeScore=93.1635;InbreedingCoeff=0.0379;MQ=49.57;MQ0=12;MQRankSum=-0.433;QD=1.64;ReadPosRankSum=0.475;VQSLOD=1.5923;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:4,0:4:6.02:0,6,77	./.	./.	0/0:17,1:18:14.85:0,15,218	0/1:14,1:14:16.45:16,0,163	0/0:9,0:9:5.95:0,6,81	0/0:15,0:12:13.08:0,13,87	0/1:6,0:6:19.62:20,0,123	0/1:14,2:15:28.58:29,0,314	0/0:11,0:11:6.02:0,6,90	0/1:10,0:9:25.64:38,0,26	0/0:13,0:14:6.91:0,7,236	0/0:16,0:15:11.86:0,12,118	1/1:11,0:11:14.67:101,15,0	0/1:15,1:16:6.32:6,0,323	0/0:11,0:11:18.06:0,18,269	0/0:9,0:7:15.05:0,15,221	1/1:3,1:3:3.01:33,3,0	0/0:9,1:10:5.75:0,6,76	0/1:10,1:11:27.28:56,0,27	0/0:17,0:17:5.81:0,6,58	0/1:18,0:18:16.05:16,0,26	0/0:12,0:11:5.51:0,6,68	0/0:18,0:18:30.10:0,30,441	0/0:12,0:12:23.84:0,24,273	0/0:15,0:15:13.95:0,14,116	0/0:11,0:10:10.70:0,11,219
chr10	33045607	.	A	ATC	1651.91	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=-1.864;DP=355;FS=17.271;HRun=0;HaplotypeScore=121.3099;InbreedingCoeff=0.7708;MQ=45.53;MQ0=3;MQRankSum=2.973;QD=16.86;ReadPosRankSum=0.034;VQSLOD=2.7632;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:8:0.17:0,0,41	0/0:5,0:5:11.96:0,12,93	0/0:13,0:8:20.91:0,21,212	0/1:11,0:5:11.27:14,0,11	0/0:9,0:9:20.77:0,21,146	0/0:13,0:12:17.92:0,18,136	0/0:11,0:11:11.92:0,12,89	0/0:23,0:22:56.69:0,57,444	0/0:20,0:20:32.87:0,33,252	0/0:12,0:11:29.97:0,30,255	0/0:12,0:12:23.84:0,24,176	1/1:1,11:12:14.72:180,15,0	0/0:17,0:17:44.69:0,45,328	1/1:17,9:25:54.07:638,54,0	1/1:17,0:17:15.04:183,15,0	0/0:10,0:10:8.94:0,9,66	0/0:8,0:8:8.91:0,9,62	0/0:7,0:7:8.92:0,9,63	0/0:11,0:11:23.94:0,24,196	0/0:10,0:9:17.81:0,18,133	0/0:16,0:16:11.83:0,12,79	0/0:10,0:10:14.96:0,15,118	1/1:5,6:11:24.05:314,24,0	1/1:13,8:21:45:497,45,0	0/0:6,0:6:11.97:0,12,96	0/0:18,0:18:44.84:0,45,352	0/0:14,0:13:29.89:0,30,229	0/0:4,0:4:11.93:0,12,89
chr10	33045609	.	CTGTGTGTGTGTGTG	C	9380.59	PASS	AB=0.594;AC=34;AF=0.630;AN=54;BaseQRankSum=-4.290;DP=361;FS=16.640;HRun=0;HaplotypeScore=149.4731;InbreedingCoeff=0.7297;MQ=45.47;MQ0=3;MQRankSum=-4.923;QD=43.23;ReadPosRankSum=1.895;VQSLOD=3.0571;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:13:14:0,14,761	0/1:1,4:5:8.82:348,0,9	0/0:15,0:9:25.74:0,26,898	0/0:12,0:5:9.03:0,9,414	1/1:4,4:8:12.03:390,12,0	0/1:5,7:11:6.92:466,0,7	1/1:3,7:10:12.04:415,12,0	1/1:11,11:21:26.87:396,27,0	1/1:3,16:20:30.10:1179,30,0	1/1:4,8:11:20.84:381,21,0	1/1:0,11:11:24.08:907,24,0	0/0:12,0:12:15.05:0,15,859	1/1:5,11:17:33.11:1231,33,0	0/0:26,0:25:48.13:0,48,2200	0/0:2,0:18:18.95:0,19,1054	1/1:5,4:9:6.02:234,6,0	1/1:7,1:8:3.01:120,3,0	1/1:4,3:7:3.01:120,3,0	0/0:11,0:11:7.73:0,8,89	1/1:3,7:10:14.94:578,15,0	1/1:7,10:17:12.04:354,12,0	1/1:2,9:11:9.50:362,10,0	0/0:12,0:12:22.87:0,23,1366	0/0:21,0:21:30.10:0,30,1674	1/1:2,4:6:6.02:240,6,0	1/1:7,10:17:25.79:458,26,0	1/1:1,13:14:30.10:1202,30,0	./.
chr10	33045636	.	T	TGG	1477.20	PASS	AB=1.000;AC=9;AF=0.167;AN=54;BaseQRankSum=0.317;DP=408;FS=9.372;HRun=1;HaplotypeScore=119.4440;InbreedingCoeff=0.7358;MQ=54.87;MQ0=9;MQRankSum=-0.010;QD=17.38;ReadPosRankSum=4.272;VQSLOD=0.7122;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:21.02:0,21,200	0/0:5,0:5:8.87:0,9,58	0/0:30,0:20:54.02:0,54,580	0/0:20,0:10:22.21:0,22,206	0/0:8,0:8:11.86:0,12,83	0/0:18,0:17:20.67:0,21,172	0/0:15,0:15:17.62:0,18,120	0/0:21,0:21:41.87:0,42,351	0/0:20,0:20:32.55:0,33,215	0/0:13,0:13:14.87:0,15,110	0/0:13,0:13:20.69:0,21,135	1/1:6,4:10:27.02:334,27,0	0/0:17,0:17:33.05:0,33,223	1/1:2,25:27:33.11:530,33,0	0/1:13,0:13:21.77:25,0,22	0/0:10,0:10:9.38:0,9,64	0/0:10,0:10:11.88:0,12,84	0/0:5,0:5:8.90:0,9,60	0/0:9,0:7:17.87:0,18,134	0/0:13,0:12:23.71:0,24,161	0/0:16,0:16:11.90:0,12,87	0/0:12,0:12:8.87:0,9,58	1/1:2,14:17:24.07:379,24,0	1/1:3,14:17:4.08:363,4,0	0/0:13,0:13:11.91:0,12,89	0/0:18,0:18:32.64:0,33,239	0/0:20,0:19:47.31:0,47,312	./.
chr10	33046207	.	G	GAC	2534.74	PASS	AB=0.822;AC=31;AF=0.596;AN=52;BaseQRankSum=-2.564;DP=583;FS=6.710;HRun=0;HaplotypeScore=98.5698;InbreedingCoeff=-0.5466;MQ=60.08;MQ0=13;MQRankSum=1.570;QD=5.43;ReadPosRankSum=-1.546;VQSLOD=2.2606;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:8:0,8,53	0/1:7,4:12:43.46:43,0,55	./.	./.	0/1:14,7:23:92.93:131,0,93	0/1:12,11:24:19.91:169,0,20	0/1:13,7:21:26.89:39,0,27	0/1:29,0:28:17.79:136,0,18	1/1:12,6:20:6.02:90,6,0	0/1:10,7:17:41.98:224,0,42	0/1:9,3:13:4.61:9,0,5	0/1:19,0:18:28.20:28,0,32	0/1:8,3:13:36.13:36,0,57	0/1:10,0:10:24.10:41,0,24	1/1:24,0:24:15.04:87,15,0	0/1:12,6:19:99:191,0,105	0/1:15,8:24:57.05:153,0,57	0/1:13,5:21:59.26:81,0,59	1/1:12,0:12:5.47:48,5,0	1/1:20,1:21:29.68:339,30,0	0/1:31,1:31:36.46:36,0,57	1/1:9,6:17:8.19:192,8,0	0/1:11,0:11:43.56:63,0,44	0/1:24,0:23:55.38:88,0,55	0/1:18,0:19:85.70:133,0,86	0/1:12,3:15:23.81:73,0,24	1/1:8,8:18:9.39:136,9,0	0/1:3,6:9:43.01:120,0,43
chr10	33046241	.	C	CACACACAC	249.23	PASS	AB=0.989;AC=12;AF=0.231;AN=52;BaseQRankSum=2.152;DP=621;FS=2.716;HRun=0;HaplotypeScore=173.1539;InbreedingCoeff=-0.1051;MQ=51.99;MQ0=27;MQRankSum=-0.282;QD=0.99;ReadPosRankSum=-4.896;VQSLOD=1.4079;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:26:7.58:0,8,123	0/0:10,0:10:4.01:0,4,159	./.	./.	0/1:27,0:26:1.32:1,0,204	0/0:28,0:28:19.05:0,19,174	0/0:21,0:21:5.86:0,6,78	0/1:35,0:33:21.18:21,0,56	0/0:20,0:20:5.80:0,6,31	0/1:26,0:23:17.84:18,0,174	0/1:15,0:16:0.93:1,0,44	0/0:23,0:18:14.91:0,15,243	0/0:15,0:15:8.92:0,9,147	0/0:16,0:10:13.77:0,14,166	1/1:11,1:21:16.42:172,16,0	0/0:24,0:24:26.20:0,26,373	0/0:24,0:24:7.65:0,8,162	0/1:23,0:23:79.23:79,0,155	0/1:15,0:13:12.48:12,0,13	0/1:24,0:23:38.69:39,0,68	0/0:33,0:29:9.79:0,10,161	0/1:18,0:19:6.90:7,0,107	0/1:18,0:12:27.60:28,0,171	0/0:21,0:19:38.17:0,38,549	0/0:25,0:24:2.94:0,3,325	0/1:25,0:25:7.88:8,0,45	0/0:16,0:16:7.42:0,7,45	0/0:13,0:13:14.71:0,15,141
chr10	33047765	.	G	GTT	3773.85	PASS	AB=0.728;AC=50;AF=0.893;AN=56;BaseQRankSum=-1.288;DP=532;FS=6.666;HRun=12;HaplotypeScore=79.6722;InbreedingCoeff=0.2167;MQ=72.23;MQ0=0;MQRankSum=-4.754;QD=7.30;ReadPosRankSum=2.323;VQSLOD=0.5935;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,25:32:43.40:526,43,0	0/1:7,0:12:12.64:25,0,13	0/1:15,0:18:32.68:33,0,100	0/0:14,0:13:20.47:0,20,146	1/1:6,0:30:33.09:182,33,0	1/1:5,0:17:11.12:118,11,0	1/1:5,0:19:0.59:75,1,0	1/1:15,0:31:13.34:106,13,0	0/1:7,0:19:5.67:50,0,6	1/1:7,0:23:5.18:76,5,0	1/1:5,0:19:31.33:136,31,0	1/1:3,9:14:15.05:210,15,0	1/1:8,0:17:17.34:60,17,0	1/1:0,19:21:29.59:386,30,0	1/1:5,0:15:9.01:86,9,0	0/1:5,0:16:2.44:46,0,2	1/1:3,0:14:20.15:72,20,0	1/1:4,0:15:24.95:86,25,0	1/1:5,0:23:20.29:161,20,0	1/1:15,0:31:31.26:236,31,0	1/1:1,0:11:19.96:69,20,0	1/1:3,0:12:17.57:62,18,0	1/1:8,11:20:13.35:139,13,0	1/1:2,10:13:26.52:322,27,0	1/1:0,0:10:19.96:69,20,0	1/1:7,0:26:21.67:177,22,0	1/1:8,0:30:32.05:168,32,0	1/1:2,1:9:17.98:94,18,0
chr10	33048150	.	GAT	G	478.38	PASS	AB=0.947;AC=10;AF=0.179;AN=56;BaseQRankSum=6.919;DP=395;FS=0.542;HRun=0;HaplotypeScore=97.7282;InbreedingCoeff=0.0035;MQ=69.00;MQ0=2;MQRankSum=-4.516;QD=3.52;ReadPosRankSum=-6.798;VQSLOD=-0.3148;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:8,6:14:32.82:265,33,0	0/0:5,0:5:6.02:0,6,100	0/1:16,0:9:28.59:29,0,114	0/0:23,0:15:11.02:0,11,119	0/0:29,0:29:41.38:0,41,913	0/1:20,0:20:64.64:65,0,478	0/1:9,0:9:1.96:2,0,285	0/0:30,0:27:72.25:0,72,1218	0/1:10,0:10:2.88:3,0,332	0/0:20,0:20:36.24:0,36,950	0/1:22,0:22:30.21:30,0,353	0/0:8,0:8:9.03:0,9,137	0/1:19,0:19:8.44:8,0,608	0/0:7,0:7:12.04:0,12,190	0/1:4,6:10:11.88:194,0,12	0/0:12,0:12:9.27:0,9,342	0/0:16,0:16:27.09:0,27,453	0/0:11,0:11:21.05:0,21,345	0/0:17,0:17:42.13:0,42,683	0/0:18,0:18:35.20:0,35,639	0/0:2,0:2:3.01:0,3,48	0/0:3,0:3:6.02:0,6,100	0/0:4,0:4:6.02:0,6,98	0/0:4,0:4:6.02:0,6,103	0/1:14,0:14:20.82:21,0,401	0/0:18,0:18:42.61:0,43,691	0/0:27,0:27:14.94:0,15,830	0/0:5,0:5:9.50:0,10,155
chr10	33048156	.	T	TATTG	2981.64	PASS	AB=0.995;AC=24;AF=0.429;AN=56;BaseQRankSum=10.890;DP=382;FS=7.248;HRun=0;HaplotypeScore=97.2772;InbreedingCoeff=-0.5234;MQ=69.02;MQ0=2;MQRankSum=-8.403;QD=8.87;ReadPosRankSum=-0.932;VQSLOD=1.4968;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,8:14:35.58:632,36,0	0/1:4,0:4:22.46:22,0,52	0/1:18,0:9:34.61:35,0,119	0/0:22,0:15:1.04:0,1,123	0/1:27,0:27:99:135,0,684	0/1:21,0:21:99:409,0,204	0/1:9,0:9:15.08:15,0,302	0/1:35,0:30:72.47:72,0,1203	0/1:11,0:11:45.99:46,0,363	0/1:20,0:20:99:136,0,601	0/1:19,0:19:99:235,0,332	0/0:7,0:7:9.03:0,9,136	0/1:18,0:18:99:209,0,512	0/0:7,0:7:12.04:0,12,202	0/1:9,0:9:3.56:134,0,4	0/1:13,0:13:99:119,0,374	0/1:16,0:16:30.85:31,0,362	0/1:9,0:10:37.34:37,0,156	0/1:17,0:17:99:207,0,384	0/1:16,0:16:81.37:81,0,564	1/1:2,0:2:3:29,3,0	0/1:2,0:2:22.46:22,0,45	0/0:3,0:3:6.02:0,6,97	0/0:3,0:3:6.02:0,6,109	0/1:13,0:13:99:193,0,281	0/1:16,0:16:99:118,0,377	0/1:26,0:26:99:222,0,470	0/0:4,0:4:9.92:0,10,170
chr10	33048406	.	GA	G	426.89	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.971;DP=502;FS=0.000;HRun=9;HaplotypeScore=52.0433;InbreedingCoeff=0.9642;MQ=71.69;MQ0=0;MQRankSum=-0.210;QD=19.40;ReadPosRankSum=2.250;VQSLOD=3.8306;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:48.12:0,48,541	0/0:10,0:10:27.05:0,27,298	0/0:10,0:10:15:0,15,158	0/0:13,0:12:15.84:0,16,176	0/0:35,0:35:90.26:0,90,1030	0/0:17,0:17:42.12:0,42,485	0/0:13,0:13:39.10:0,39,439	0/0:24,0:24:66.19:0,66,753	0/0:21,0:21:54.16:0,54,623	0/0:27,0:27:54.16:0,54,623	0/0:16,0:16:45.13:0,45,519	0/0:15,0:15:42.11:0,42,475	0/0:14,0:14:36.11:0,36,415	0/0:21,0:21:54.16:0,54,623	1/1:2,20:22:57.03:522,57,0	0/0:13,0:13:36.11:0,36,415	0/0:14,0:14:39.12:0,39,450	0/0:13,0:13:29.44:0,29,345	0/0:21,0:21:51.14:0,51,579	0/0:28,0:28:75.20:0,75,848	0/0:10,0:10:30.09:0,30,346	0/0:10,0:10:27.07:0,27,302	0/0:15,0:15:45.13:0,45,519	0/0:8,0:8:21.06:0,21,242	0/0:18,0:18:51.15:0,51,588	0/0:25,0:25:66.18:0,66,746	0/0:38,0:38:86.79:0,87,989	0/0:11,0:11:33.08:0,33,371
chr10	33050048	.	GC	G	8682.06	PASS	AB=1.000;AC=54;AF=0.964;AN=56;BaseQRankSum=6.131;DP=553;FS=2.519;HRun=1;HaplotypeScore=170.8977;InbreedingCoeff=-0.0440;MQ=80.81;MQ0=0;MQRankSum=-2.100;QD=15.70;ReadPosRankSum=6.035;VQSLOD=5.2044;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:21:52.83:326,53,0	1/1:12,0:12:29.58:204,30,0	1/1:12,0:12:28.95:144,29,0	0/1:23,0:23:24.28:267,0,24	1/1:25,0:25:31.22:337,31,0	1/1:31,0:31:80.18:549,80,0	1/1:24,0:24:63.78:385,64,0	1/1:23,0:23:66.42:371,66,0	1/1:22,0:22:37.07:369,37,0	1/1:22,0:22:62.92:351,63,0	1/1:16,0:16:38.47:266,38,0	1/1:22,0:22:56.09:373,56,0	1/1:1,22:23:3.01:39,3,0	1/1:17,0:17:44.44:310,44,0	1/1:21,0:21:56.20:392,56,0	1/1:23,0:23:37.09:351,37,0	1/1:13,0:13:32.27:196,32,0	0/1:7,0:7:3.36:86,0,3	1/1:26,0:26:75.09:425,75,0	1/1:22,0:22:65.25:465,65,0	1/1:19,0:19:8.78:226,9,0	1/1:15,0:15:41.39:284,41,0	1/1:8,0:8:23.67:167,24,0	1/1:22,0:22:53.29:337,53,0	1/1:22,0:22:55.70:345,56,0	1/1:24,0:24:69.92:436,70,0	1/1:35,0:35:94.72:655,95,0	1/1:3,0:3:2.99:24,3,0
chr10	33050379	.	T	TTCTGAGGAAACCCTCCTCCCAACTTCA	1242.05	PASS	AB=0.714;AC=5;AF=0.83;AN=6;BaseQRankSum=-1.179;DP=13;FS=7.782;HRun=0;HaplotypeScore=33.9064;MQ=199.94;MQ0=0;MQRankSum=-0.762;QD=124.20;ReadPosRankSum=0.762;VQSLOD=1.8027;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	./.	1/1:1,1:3:9.03:698,9,0	0/1:3,0:5:39.75:593,0,40	./.	./.	./.	1/1:2,0:2:2.98:21,3,0	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.
chr10	33052124	.	CT	C	2549.48	PASS	AB=0.715;AC=37;AF=0.661;AN=56;BaseQRankSum=-0.655;DP=286;FS=13.154;HRun=13;HaplotypeScore=35.3765;InbreedingCoeff=0.2502;MQ=61.88;MQ0=14;MQRankSum=-1.296;QD=10.24;ReadPosRankSum=2.596;VQSLOD=1.2079;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:10,4:15:32.14:32,0,162	1/1:0,5:6:16.73:115,17,0	0/1:14,0:7:8.70:9,0,46	0/0:10,0:8:6.35:0,6,42	1/1:3,10:12:29.83:219,30,0	1/1:1,4:4:8.95:66,9,0	1/1:2,6:7:11.93:88,12,0	0/1:7,11:19:12.99:175,0,13	1/1:4,4:7:11.90:88,12,0	1/1:2,13:14:38.75:284,39,0	0/1:7,7:11:8.33:110,0,8	0/0:8,0:8:14.93:0,15,126	1/1:1,6:7:14.89:109,15,0	0/0:7,0:6:12.02:0,12,117	0/0:4,0:4:2.68:0,3,14	0/1:2,7:9:11.24:92,0,11	1/1:3,8:11:20.84:153,21,0	1/1:4,7:11:19.92:137,20,0	1/1:4,4:8:11.86:86,12,0	0/1:4,5:9:11.25:91,0,11	1/1:6,5:11:17.66:122,18,0	1/1:0,2:2:2.98:22,3,0	0/1:7,1:6:6.92:7,0,94	0/0:6,0:6:15.02:0,15,146	1/1:1,16:16:47.73:350,48,0	1/1:3,6:8:17.57:131,18,0	0/1:7,5:12:37.45:88,0,37	0/1:3,12:14:0.28:152,0,0
chr10	33063350	.	TTTG	T	8026.49	PASS	AB=0.737;AC=43;AF=0.768;AN=56;BaseQRankSum=10.228;DP=772;FS=8.395;HRun=0;HaplotypeScore=109.6090;InbreedingCoeff=0.8338;MQ=73.12;MQ0=4;MQRankSum=0.803;QD=13.27;ReadPosRankSum=-0.761;VQSLOD=3.7108;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,20:34:26.99:362,27,0	1/1:4,9:13:21.06:264,21,0	0/0:29,0:21:6:0,6,79	0/0:27,0:22:11.96:0,12,108	1/1:16,12:28:27.09:356,27,0	1/1:14,21:34:18.31:500,18,0	1/1:13,10:23:21.07:282,21,0	1/1:24,6:29:13.13:156,13,0	1/1:13,15:28:33.07:423,33,0	1/1:22,16:38:41.26:468,41,0	1/1:11,15:26:33.10:438,33,0	0/0:29,0:29:11.17:0,11,813	1/1:19,21:40:47.95:644,48,0	0/0:24,1:25:13.94:0,14,926	1/1:11,0:30:40.70:256,41,0	1/1:12,23:35:45.15:604,45,0	1/1:11,22:33:42.61:565,43,0	0/1:9,5:14:81.53:219,0,82	1/1:19,8:25:24.05:290,24,0	1/1:16,10:26:24.03:286,24,0	1/1:18,15:33:27.04:362,27,0	1/1:12,14:26:18.06:234,18,0	0/0:21,0:20:27.06:0,27,433	0/0:36,0:36:69.24:0,69,1341	1/1:17,7:24:11.99:141,12,0	1/1:14,11:25:32.27:372,32,0	1/1:7,20:27:51.17:684,51,0	1/1:4,6:10:9.03:121,9,0
chr10	33064226	.	TA	T	7833.35	PASS	AB=0.646;AC=51;AF=0.911;AN=56;BaseQRankSum=-0.288;DP=527;FS=2.397;HRun=11;HaplotypeScore=73.2002;InbreedingCoeff=0.2886;MQ=70.13;MQ0=0;MQRankSum=-2.956;QD=15.04;ReadPosRankSum=0.191;VQSLOD=5.4749;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:16:1.82:6,2,0	1/1:0,8:8:17.98:148,18,0	0/0:6,0:6:4.56:0,5,35	0/1:10,2:11:24.30:24,0,153	1/1:4,19:23:50.90:419,51,0	1/1:4,20:24:47.93:394,48,0	0/1:1,10:11:2.02:192,0,2	1/1:7,29:36:73.36:568,73,0	1/1:5,13:18:35.93:296,36,0	1/1:2,23:25:36.92:510,37,0	1/1:2,27:31:84.98:677,85,0	1/1:2,0:18:22.88:66,23,0	1/1:1,13:15:35:277,35,0	1/1:1,0:16:30.56:88,31,0	1/1:3,0:17:17.18:49,17,0	1/1:2,19:21:53.92:440,54,0	1/1:5,15:20:44.93:367,45,0	1/1:5,7:13:20:153,20,0	1/1:5,15:21:46.98:375,47,0	1/1:4,23:27:30.89:461,31,0	1/1:3,13:16:35.95:296,36,0	1/1:4,12:16:26.94:222,27,0	1/1:2,0:22:36.66:106,37,0	1/1:1,0:6:6.11:18,6,0	1/1:3,17:20:15.96:337,16,0	1/1:2,22:24:65.91:542,66,0	1/1:5,29:35:79.60:646,80,0	0/1:2,7:10:5.18:159,0,5
chr10	33064236	.	AAC	A	922.85	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=11.518;DP=529;FS=0.448;HRun=0;HaplotypeScore=106.0211;InbreedingCoeff=0.6851;MQ=69.33;MQ0=0;MQRankSum=-3.815;QD=9.82;ReadPosRankSum=1.923;VQSLOD=3.4138;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,14:14:36.08:479,36,0	0/0:10,0:10:23.53:0,24,150	0/1:3,0:3:2.19:2,0,46	0/0:14,0:13:26.80:0,27,341	0/0:20,0:20:55.65:0,56,340	0/0:22,0:22:52.78:0,53,320	0/0:13,0:13:35.27:0,35,249	0/0:36,0:36:97.69:0,98,699	0/0:16,0:16:41.07:0,41,264	0/0:28,0:28:72.48:0,72,501	0/0:29,0:29:57.16:0,57,431	1/1:16,0:16:31.65:133,32,0	0/0:16,0:16:29.87:0,30,224	1/1:18,0:18:7.96:155,8,0	0/1:16,0:16:10.87:75,0,11	0/0:21,0:21:58.67:0,59,375	0/0:21,0:21:58.50:0,58,349	0/0:13,0:13:22.92:0,23,159	0/0:20,0:20:40.71:0,41,300	0/0:27,0:27:73.33:0,73,472	0/0:14,0:14:38.09:0,38,228	0/0:14,0:14:35.10:0,35,227	1/1:20,0:20:48.22:220,48,0	0/1:7,0:7:23.97:24,0,34	0/0:20,0:20:52.86:0,53,376	0/0:30,0:30:88.17:0,88,585	0/0:36,0:35:81.54:0,82,538	0/0:15,0:15:22.77:0,23,267
chr10	33064978	.	TG	T	7862.88	PASS	AB=1.000;AC=55;AF=0.982;AN=56;BaseQRankSum=6.520;DP=601;FS=5.937;HRun=2;HaplotypeScore=115.8607;InbreedingCoeff=-0.0269;MQ=80.32;MQ0=0;MQRankSum=-2.750;QD=13.08;ReadPosRankSum=6.979;VQSLOD=3.7902;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:34,0:34:69.58:517,70,0	1/1:8,0:8:23.05:122,23,0	1/1:13,0:13:23.64:105,24,0	0/1:16,0:16:62.52:117,0,63	1/1:25,0:25:69.11:390,69,0	1/1:15,0:15:40.36:214,40,0	1/1:13,0:13:8.80:140,9,0	1/1:27,0:27:70.71:376,71,0	1/1:25,0:25:45.44:328,45,0	1/1:33,0:33:65.51:430,66,0	1/1:16,0:16:23.42:195,23,0	1/1:17,0:17:48.93:256,49,0	1/1:22,0:22:34.25:288,34,0	1/1:24,0:24:51.78:270,52,0	1/1:22,0:22:56.46:308,56,0	1/1:18,0:18:46:240,46,0	1/1:18,0:18:46.12:245,46,0	1/1:7,0:7:20.52:127,21,0	1/1:27,0:27:77.76:419,78,0	1/1:32,0:32:85.14:476,85,0	1/1:42,0:42:99:633,116,0	1/1:15,0:15:37.55:208,38,0	1/1:20,0:20:45.61:248,46,0	1/1:26,0:26:71.94:382,72,0	1/1:22,0:22:31.80:262,32,0	1/1:26,0:26:43.23:305,43,0	1/1:0,23:23:3.01:37,3,0	1/1:15,0:15:40.68:225,41,0
chr10	33065173	.	TGAAAGATTAGATG	T	3012.51	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=8.529;DP=710;FS=1.606;HRun=0;HaplotypeScore=251.7441;InbreedingCoeff=0.9916;MQ=95.30;MQ0=0;MQRankSum=-8.600;QD=73.48;ReadPosRankSum=1.332;VQSLOD=3.3197;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,31:41:78.13:3107,78,0	0/0:11,0:11:33.11:0,33,2074	0/0:35,0:35:99:0,102,5729	0/0:31,0:31:87.17:0,87,4192	0/0:30,0:30:90.31:0,90,5419	0/0:19,0:19:57.20:0,57,3399	0/0:23,0:23:69.24:0,69,4084	0/0:23,0:23:66.23:0,66,3630	0/0:24,0:24:72.25:0,72,4281	0/0:31,0:31:93.31:0,93,5399	0/0:29,0:29:87.30:0,87,5072	0/0:17,0:17:51.18:0,51,3055	0/0:22,0:22:66.23:0,66,4134	0/0:31,0:31:93.32:0,93,5490	0/0:31,0:31:87.30:0,87,5009	0/0:23,0:23:69.22:0,69,4266	0/0:23,0:23:66.23:0,66,3587	0/0:11,0:11:33.11:0,33,2065	0/0:24,0:24:72.24:0,72,3880	0/0:27,0:27:81.28:0,81,5093	0/0:25,0:25:69.24:0,69,3894	0/0:27,0:27:72.24:0,72,4104	0/0:24,0:24:72.25:0,72,4428	0/0:26,0:26:78.25:0,78,4657	0/0:28,0:28:84.29:0,84,4784	0/0:36,0:36:99:0,108,6421	0/0:32,0:32:96.33:0,96,5639	0/0:6,0:6:18.06:0,18,1173
chr10	33066871	.	CTTGG	C	79.16	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.128;DP=536;FS=0.000;HRun=0;HaplotypeScore=96.7045;InbreedingCoeff=0.6909;MQ=76.92;MQ0=0;MQRankSum=-1.816;QD=4.17;ReadPosRankSum=-1.515;VQSLOD=1.5947;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:10,9:19:12.04:165,12,0	0/0:10,0:10:18.03:0,18,350	0/0:20,0:20:45.11:0,45,855	0/0:34,0:30:34.33:0,34,843	0/0:22,0:23:18.05:0,18,286	0/0:19,0:20:24.07:0,24,509	0/0:22,0:22:24.08:0,24,555	0/0:33,0:34:51.16:0,51,1071	0/0:20,0:20:27.09:0,27,664	0/0:23,0:23:39.13:0,39,854	0/0:13,0:13:9.03:0,9,213	0/0:15,0:15:15.05:0,15,348	0/0:21,0:21:24.08:0,24,524	0/0:16,0:16:39.10:0,39,753	0/0:20,0:20:27.09:0,27,640	0/0:18,0:18:21.05:0,21,397	0/0:28,0:28:57.14:0,57,1280	0/0:8,0:8:6.02:0,6,150	0/0:13,0:13:27.07:0,27,514	0/0:23,0:24:18.06:0,18,410	0/0:21,0:21:18.06:0,18,447	0/0:15,0:17:15.05:0,15,262	0/0:6,0:7:6.02:0,6,134	0/0:24,0:24:48.16:0,48,1088	0/0:9,0:9:12.04:0,12,280	0/0:22,0:22:21.07:0,21,431	0/0:22,0:21:48.16:0,48,1055	0/0:13,0:13:36.12:0,36,902
chr10	33066994	.	TC	T	10012.64	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=1.315;DP=593;FS=3.398;HRun=9;HaplotypeScore=71.1206;InbreedingCoeff=0.9541;MQ=78.16;MQ0=0;MQRankSum=-1.913;QD=22.55;ReadPosRankSum=1.794;VQSLOD=5.8736;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:32.93:0,33,148	1/1:4,9:13:5.23:198,5,0	0/0:20,0:18:9.05:0,9,212	0/0:19,0:18:7.27:0,7,143	1/1:6,30:36:49.49:707,49,0	1/1:1,22:24:62.07:555,62,0	1/1:4,16:20:42.02:384,42,0	1/1:4,31:35:89.74:792,90,0	1/1:2,20:22:60.03:549,60,0	1/1:3,18:21:54.02:490,54,0	1/1:1,24:25:68.95:614,69,0	0/0:25,0:25:69.16:0,69,765	1/1:5,27:32:74.71:686,75,0	0/0:11,0:11:33.10:0,33,381	0/0:3,0:23:51.34:0,51,280	1/1:1,32:33:90.04:824,90,0	1/1:2,23:25:57.02:522,57,0	1/1:1,6:7:18.01:165,18,0	1/1:0,13:13:39.02:357,39,0	1/1:3,30:33:61.36:798,61,0	1/1:3,9:12:24.01:220,24,0	1/1:3,13:16:35.97:321,36,0	0/0:23,0:23:69.20:0,69,796	0/0:10,0:10:27.07:0,27,302	1/1:0,25:25:72.04:659,72,0	1/1:3,23:26:69:625,69,0	1/1:2,13:15:33.01:302,33,0	1/1:1,10:11:27.01:247,27,0
chr10	33066997	.	C	CCA	538.49	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.873;DP=591;FS=2.512;HRun=0;HaplotypeScore=120.6385;InbreedingCoeff=0.9930;MQ=76.07;MQ0=0;MQRankSum=-2.184;QD=28.34;ReadPosRankSum=0.934;VQSLOD=5.1454;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,16:19:36.12:633,36,0	0/0:12,0:12:32.94:0,33,267	0/0:19,0:17:47.02:0,47,513	0/0:17,0:16:33.36:0,33,385	0/0:36,0:36:99:0,102,825	0/0:25,0:25:65.85:0,66,523	0/0:18,0:18:47.90:0,48,384	0/0:38,0:38:99:0,103,841	0/0:21,0:21:59.86:0,60,474	0/0:19,0:19:53.87:0,54,427	0/0:27,0:27:71.60:0,72,551	0/0:25,0:25:75.23:0,75,1092	0/0:30,0:30:77.49:0,77,616	0/0:11,0:11:33.11:0,33,505	0/0:22,0:22:48.43:0,48,219	0/0:33,0:33:92.77:0,93,734	0/0:24,0:24:62.81:0,63,494	0/0:9,0:9:20.93:0,21,163	0/0:13,0:13:38.91:0,39,308	0/0:33,0:33:95.78:0,96,786	0/0:14,0:14:35.94:0,36,292	0/0:14,0:14:35.87:0,36,278	0/0:24,0:24:69.23:0,69,1055	0/0:10,0:10:30.09:0,30,438	0/0:25,0:25:71.83:0,72,569	0/0:27,0:27:80.85:0,81,653	0/0:15,0:15:38.65:0,39,304	0/0:11,0:11:26.94:0,27,213
chr10	33067402	.	GGGGAAGGGGGGAA	G	1148.41	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.429;DP=582;FS=1.109;HRun=0;HaplotypeScore=206.8646;InbreedingCoeff=0.9321;MQ=76.25;MQ0=2;MQRankSum=-4.939;QD=76.56;ReadPosRankSum=0.500;VQSLOD=3.0396;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:57.16:0,57,2843	0/0:5,0:5:12.04:0,12,718	0/0:45,0:29:57.97:0,58,1624	0/0:46,0:34:48.03:0,48,2489	0/0:27,0:27:69.22:0,69,3787	0/0:17,0:17:39.12:0,39,2297	0/0:23,0:23:48.16:0,48,2857	0/0:22,0:22:45.13:0,45,2209	0/0:17,0:17:45.14:0,45,2648	0/0:12,0:12:30.10:0,30,1607	0/0:17,0:17:45.15:0,45,2638	0/0:19,0:19:48.16:0,48,3017	0/0:29,0:29:75.25:0,75,4421	0/0:19,0:19:48.16:0,48,2833	1/1:1,14:15:33.11:1243,33,0	0/0:19,0:19:48.14:0,48,2513	0/0:23,0:23:54.16:0,54,2835	0/0:6,0:6:12.04:0,12,750	0/0:10,0:10:18.05:0,18,811	0/0:27,0:27:57.17:0,57,3199	0/0:10,0:10:24.07:0,24,1266	0/0:21,0:21:54.19:0,54,3163	0/0:25,0:25:66.23:0,66,4061	0/0:13,0:13:33.10:0,33,1824	0/0:26,0:26:69.24:0,69,4022	0/0:25,0:25:60.21:0,60,3752	0/0:25,0:24:57:0,57,3362	0/0:12,0:12:33.11:0,33,2048
chr10	33067420	.	A	AG	618.90	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-2.486;DP=579;FS=5.441;HRun=6;HaplotypeScore=69.8797;InbreedingCoeff=0.9355;MQ=71.21;MQ0=2;MQRankSum=-0.700;QD=22.10;ReadPosRankSum=-0.656;VQSLOD=2.6203;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,24:28:57.18:714,57,0	0/0:8,0:8:24.03:0,24,236	0/0:38,0:22:10:0,10,286	0/0:41,0:30:51:0,51,477	0/0:24,0:24:66.15:0,66,673	0/0:17,0:17:51.11:0,51,515	0/0:22,0:22:38.24:0,38,548	0/0:24,0:24:60.11:0,60,604	0/0:16,0:16:48.11:0,48,489	0/0:12,0:12:30.07:0,30,305	0/0:15,0:15:42.07:0,42,416	0/0:22,0:22:66.15:0,66,671	0/0:32,0:32:90.20:0,90,917	0/0:17,0:17:51.11:0,51,519	0/0:18,0:18:39.19:0,39,199	0/0:19,0:19:51.10:0,51,514	0/0:21,0:21:54.09:0,54,537	0/0:8,0:8:24:0,24,233	0/0:7,0:7:15.01:0,15,145	0/0:23,0:23:63.14:0,63,642	0/0:11,0:11:30.05:0,30,299	0/0:22,0:22:57.10:0,57,565	0/0:27,0:27:81.16:0,81,818	0/0:15,0:15:36.07:0,36,367	0/0:24,0:24:66.11:0,66,662	0/0:29,0:29:81.16:0,81,820	0/0:23,0:22:59.91:0,60,611	0/0:13,0:13:36.02:0,36,349
chr10	33068010	.	A	AT	459.49	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=-0.461;DP=497;FS=0.000;HRun=9;HaplotypeScore=53.8978;InbreedingCoeff=0.4200;MQ=67.29;MQ0=1;MQRankSum=-1.232;QD=11.49;ReadPosRankSum=-0.656;VQSLOD=2.1718;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:53.99:0,54,469	0/0:5,0:5:12:0,12,104	0/0:5,0:5:0.03:0,0,60	0/0:8,0:8:11.21:0,11,83	0/0:26,0:26:71.97:0,72,625	0/0:21,0:21:56.97:0,57,494	0/0:17,0:17:44.99:0,45,391	0/0:22,0:22:44.95:0,45,387	0/0:16,0:16:47.97:0,48,413	0/0:26,0:26:68.98:0,69,599	0/0:20,0:20:53.99:0,54,469	0/0:20,0:20:45.70:0,46,222	0/0:17,0:17:44.97:0,45,390	0/0:14,0:14:28.91:0,29,142	1/1:5,19:25:8.07:526,8,0	0/0:22,0:22:47.97:0,48,417	0/0:18,0:18:53.99:0,54,469	0/0:10,0:9:17.99:0,18,156	0/0:32,0:32:77.96:0,78,671	0/0:24,1:25:41.81:0,42,591	0/0:12,0:12:4.83:0,5,206	0/0:20,0:20:59.99:0,60,521	0/1:15,0:15:28.77:29,0,105	0/0:11,0:11:31.65:0,32,163	0/0:9,0:9:23.98:0,24,205	0/0:23,0:23:62.97:0,63,545	0/0:31,0:31:77.93:0,78,665	0/0:7,0:7:20.97:0,21,177
chr10	33068405	.	AT	A	12416.79	PASS	AB=0.947;AC=53;AF=0.946;AN=56;BaseQRankSum=-6.275;DP=628;FS=18.269;HRun=10;HaplotypeScore=76.3242;InbreedingCoeff=0.7242;MQ=73.13;MQ0=2;MQRankSum=-2.757;QD=20.63;ReadPosRankSum=3.933;VQSLOD=3.9828;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,28:35:71.91:625,72,0	1/1:0,11:11:32.99:287,33,0	0/1:17,1:16:6.64:7,0,125	0/0:25,1:23:26.19:0,26,241	1/1:2,29:31:80.97:703,81,0	1/1:1,18:19:50.99:443,51,0	1/1:2,22:24:53.98:469,54,0	1/1:5,29:34:86.95:749,87,0	1/1:2,19:21:44.99:391,45,0	1/1:4,26:30:80.93:694,81,0	1/1:1,26:27:71.98:625,72,0	1/1:0,17:17:50.99:443,51,0	1/1:1,32:33:66.07:663,66,0	1/1:2,19:21:47.97:417,48,0	1/1:5,14:19:38.96:338,39,0	1/1:3,21:24:53.98:469,54,0	1/1:3,16:19:44.98:391,45,0	1/1:0,12:12:32.99:287,33,0	1/1:4,17:21:50.98:441,51,0	1/1:0,22:23:62.01:526,62,0	1/1:1,12:13:32.99:285,33,0	1/1:2,15:17:41.99:364,42,0	1/1:2,22:24:65.98:573,66,0	1/1:0,12:12:32.99:286,33,0	1/1:1,25:27:68.20:580,68,0	1/1:4,26:30:71.95:622,72,0	1/1:3,20:25:52.06:429,52,0	1/1:0,15:15:35.99:312,36,0
chr10	33068939	.	G	GT	8915.03	PASS	AB=0.741;AC=38;AF=0.679;AN=56;BaseQRankSum=-15.696;DP=635;FS=10.489;HRun=11;HaplotypeScore=90.4011;InbreedingCoeff=0.5153;MQ=75.06;MQ0=0;MQRankSum=0.207;QD=17.97;ReadPosRankSum=-0.407;VQSLOD=4.8235;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:34:40.02:0,40,117	1/1:0,8:9:18.04:182,18,0	0/1:14,0:14:30.87:31,0,111	0/1:16,0:17:9.15:9,0,81	1/1:13,21:35:28.03:597,28,0	1/1:5,25:31:42.73:600,43,0	1/1:1,11:13:9.67:265,10,0	0/1:22,10:32:4.47:394,0,4	1/1:2,23:28:64.96:662,65,0	1/1:7,17:24:30.86:486,31,0	1/1:2,17:19:45.05:446,45,0	0/0:5,0:25:31.92:0,32,104	0/1:6,21:27:6.96:458,0,7	0/0:3,0:14:17.84:0,18,53	0/0:2,0:34:60.62:0,61,177	1/1:4,16:21:21.79:389,22,0	1/1:6,22:30:48.60:643,49,0	1/1:0,12:12:36.02:348,36,0	1/1:10,14:28:3.34:368,3,0	1/1:3,25:29:51.88:637,52,0	1/1:2,11:13:21.04:213,21,0	1/1:7,19:26:51.06:506,51,0	0/0:2,0:21:38.22:0,38,111	0/0:0,0:11:20.37:0,20,60	1/1:5,24:30:59.95:593,60,0	0/1:6,11:17:27.63:293,0,28	0/1:8,25:33:31.86:589,0,32	1/1:0,7:7:21.02:205,21,0
chr10	33070541	.	GCCC	G	5084.78	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=11.851;DP=679;FS=0.401;HRun=4;HaplotypeScore=95.6680;InbreedingCoeff=0.9995;MQ=61.15;MQ0=9;MQRankSum=-1.387;QD=45.81;ReadPosRankSum=0.761;VQSLOD=4.0125;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,102,2380	0/0:10,0:9:27.09:0,27,639	0/0:36,0:15:40.95:0,41,835	0/0:50,0:28:72.24:0,72,1623	0/0:28,0:27:81.28:0,81,1916	0/0:22,0:22:66.21:0,66,1469	0/0:22,0:22:63.21:0,63,1446	0/0:15,0:15:42.14:0,42,994	0/0:18,0:18:54.17:0,54,1231	0/0:29,0:29:84.29:0,84,1955	0/0:27,0:27:78.25:0,78,1798	1/1:1,20:20:48.16:831,48,0	0/0:23,0:23:69.24:0,69,1632	1/1:0,26:26:75.26:1307,75,0	1/1:0,23:23:60.20:1043,60,0	0/0:26,0:26:78.27:0,78,1845	0/0:28,0:28:81.08:0,81,1914	0/0:16,0:16:45.15:0,45,974	0/0:26,0:26:78.25:0,78,1756	0/0:33,0:33:93.32:0,93,2174	0/0:19,0:19:57.20:0,57,1345	0/0:27,0:27:81.28:0,81,1908	1/1:0,21:21:57.20:1005,57,0	1/1:0,20:20:51.17:898,51,0	0/0:14,0:14:42.14:0,42,994	0/0:24,0:24:69.24:0,69,1632	0/0:30,0:30:87.28:0,87,1967	0/0:10,0:10:27.09:0,27,617
chr10	33070938	.	GAGATAGAT	G	3111.96	PASS	AB=0.750;AC=31;AF=0.646;AN=48;BaseQRankSum=-1.778;DP=620;FS=21.093;HRun=0;HaplotypeScore=172.0322;InbreedingCoeff=0.2799;MQ=66.67;MQ0=5;MQRankSum=-3.271;QD=7.17;ReadPosRankSum=0.365;VQSLOD=1.3553;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:29:33.54:0,34,1040	1/1:10,3:13:2.87:73,3,0	./.	./.	1/1:20,20:40:8.56:59,9,0	1/1:14,7:20:9.03:220,9,0	1/1:10,0:9:3.01:38,3,0	0/0:30,0:28:0:0,0,0	1/1:17,9:26:6.02:147,6,0	1/1:21,13:33:31.81:634,32,0	1/1:26,7:33:2.84:20,3,0	0/1:10,0:17:34.96:35,0,82	0/1:15,0:22:55.42:55,0,101	1/1:13,3:16:2.91:73,3,0	0/1:30,0:42:49.12:49,0,125	1/1:12,8:19:9.03:220,9,0	./.	0/0:16,0:16:6.01:0,6,64	./.	0/1:21,14:36:12.73:177,0,13	1/1:4,0:4:5.96:118,6,0	0/0:40,0:41:45.13:0,45,1257	0/0:13,0:23:26.94:0,27,219	0/0:5,0:9:5.99:0,6,49	1/1:11,5:16:3.01:58,3,0	1/1:28,11:39:36.10:744,36,0	1/1:24,9:33:9.03:220,9,0	0/1:7,3:11:8.05:328,0,8
chr10	33071350	.	T	TTG	7345.14	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=8.890;DP=659;FS=7.659;HRun=0;HaplotypeScore=83.9770;InbreedingCoeff=0.9998;MQ=93.41;MQ0=0;MQRankSum=-3.474;QD=48.97;ReadPosRankSum=3.995;VQSLOD=5.9526;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,27:28:75.26:1354,75,0	0/0:11,0:11:30.09:0,30,412	0/0:32,0:32:87.15:0,87,1198	0/0:26,0:26:66.13:0,66,845	0/0:30,0:30:84.26:0,84,1183	0/0:23,0:23:66.22:0,66,945	0/0:13,0:13:39.13:0,39,558	0/0:28,0:28:84.28:0,84,1201	0/0:33,0:33:93.31:0,93,1332	0/0:25,0:25:75.25:0,75,1074	0/0:13,0:13:39.13:0,39,559	1/1:1,22:24:60.21:1100,60,0	0/0:23,0:23:66.22:0,66,941	1/1:2,33:35:93.32:1705,93,0	1/1:1,27:30:81.28:1481,81,0	0/0:24,0:24:69.23:0,69,988	0/0:18,0:18:51.17:0,51,731	0/0:12,0:12:33.07:0,33,450	0/0:21,0:21:60.18:0,60,824	0/0:43,0:43:99:0,123,1761	0/0:19,0:19:57.17:0,57,798	0/0:24,0:24:66.19:0,66,908	1/1:1,21:22:60.07:1100,60,0	1/1:0,11:11:33.11:605,33,0	0/0:19,0:19:57.18:0,57,801	0/0:26,0:26:75.25:0,75,1075	0/0:30,0:30:87.29:0,87,1246	0/0:16,0:16:45.15:0,45,645
chr10	33071816	.	ATCT	A	2285.18	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=10.417;DP=598;FS=7.440;HRun=0;HaplotypeScore=91.2018;InbreedingCoeff=0.9907;MQ=83.40;MQ0=0;MQRankSum=-3.410;QD=32.19;ReadPosRankSum=2.028;VQSLOD=4.0588;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:48.16:0,48,1051	0/0:6,0:6:18.06:0,18,408	0/0:22,0:22:57.19:0,57,1190	0/0:13,0:13:39.12:0,39,780	0/0:29,0:29:84.29:0,84,1902	0/0:18,0:18:54.18:0,54,1156	0/0:11,0:11:30.10:0,30,680	0/0:33,0:33:93.32:0,93,2067	0/0:17,0:17:48.16:0,48,1078	0/0:23,0:23:69.23:0,69,1522	0/0:26,0:26:75.26:0,75,1673	1/1:3,16:19:42.14:699,42,0	0/0:21,0:21:60.21:0,60,1359	1/1:1,26:27:57.19:947,57,0	0/0:30,0:30:90.29:0,90,1966	0/0:26,0:25:78.26:0,78,1701	0/0:28,0:28:81.28:0,81,1835	0/0:7,0:7:15.02:0,15,282	0/0:20,0:20:54.18:0,54,1183	0/0:32,0:32:90.31:0,90,1993	0/0:19,0:19:57.20:0,57,1240	0/0:22,0:22:66.23:0,66,1492	1/1:1,15:16:30.10:499,30,0	1/1:1,8:9:18.06:299,18,0	0/0:32,0:32:96.33:0,96,2149	0/0:24,0:24:72.22:0,72,1521	0/0:40,0:40:99:0,117,2582	0/0:11,0:11:33.05:0,33,653
chr10	33073803	.	C	CT	1686.50	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=8.486;DP=740;FS=2.035;HRun=0;HaplotypeScore=88.8414;InbreedingCoeff=0.9758;MQ=86.17;MQ0=0;MQRankSum=-3.182;QD=41.13;ReadPosRankSum=1.463;VQSLOD=4.2357;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,38:41:99:1781,114,0	0/0:9,0:9:27.09:0,27,376	0/0:28,0:28:81.10:0,81,1092	0/0:29,0:29:60.75:0,61,1028	0/0:38,0:38:99:0,111,1546	0/0:35,0:35:99:0,105,1450	0/0:30,0:30:90.29:0,90,1242	0/0:29,0:29:87.28:0,87,1203	0/0:22,0:22:66.21:0,66,906	0/0:27,0:27:81.26:0,81,1119	0/0:17,0:17:51.17:0,51,713	0/0:36,0:36:99:0,108,1510	0/0:34,0:34:99:0,99,1367	0/0:28,0:28:84.27:0,84,1157	0/0:22,0:22:66.22:0,66,923	0/0:24,0:24:69.20:0,69,931	0/0:38,0:38:99:0,111,1495	0/0:5,0:5:15.05:0,15,210	0/0:13,0:13:39.11:0,39,526	0/0:34,0:34:99:0,99,1315	0/0:29,0:29:87.28:0,87,1200	0/0:23,0:23:69.22:0,69,948	0/0:30,0:30:87.29:0,87,1217	0/0:31,0:31:84.19:0,84,1129	0/0:27,0:27:81.26:0,81,1116	0/0:35,1:36:60.38:0,60,1391	0/0:19,0:19:54.18:0,54,753	0/0:6,0:6:18.06:0,18,252
chr10	33074436	.	TA	T	2328.88	PASS	AB=1.000;AC=14;AF=0.250;AN=56;BaseQRankSum=5.946;DP=557;FS=1.734;HRun=10;HaplotypeScore=104.2579;InbreedingCoeff=0.8137;MQ=69.98;MQ0=0;MQRankSum=-0.114;QD=18.19;ReadPosRankSum=-1.874;VQSLOD=3.0213;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,20:21:56.98:495,57,0	0/1:9,0:9:7.15:7,0,86	0/0:12,0:12:19.86:0,20,164	0/0:5,0:5:14.93:0,15,137	0/0:25,0:25:69.32:0,69,430	0/0:21,0:21:61.29:0,61,355	0/0:15,0:15:40.68:0,41,231	0/0:33,0:33:18.14:0,18,279	0/0:23,0:23:59.92:0,60,381	0/0:22,0:22:51.70:0,52,286	0/0:20,0:20:9.13:0,9,236	1/1:6,12:17:35.98:312,36,0	0/0:23,0:23:39.06:0,39,324	1/1:2,12:14:20.73:271,21,0	1/1:2,18:20:53.99:469,54,0	0/0:17,0:17:20.94:0,21,216	0/0:12,0:12:11.02:0,11,151	0/1:7,0:7:7.14:7,0,48	0/0:22,0:22:53.46:0,53,287	0/0:33,0:33:68.46:0,68,505	0/0:18,0:18:28.57:0,29,257	0/0:17,0:17:18.61:0,19,207	1/1:3,24:27:77.15:645,77,0	1/1:0,12:12:35.99:312,36,0	0/0:26,1:27:44.10:0,44,369	0/0:28,0:28:35.29:0,35,307	0/0:43,0:43:72.33:0,72,602	0/0:13,0:13:26.57:0,27,170
chr10	33074870	.	T	TA	4075.90	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-6.886;DP=557;FS=7.478;HRun=3;HaplotypeScore=56.5287;InbreedingCoeff=0.9901;MQ=72.49;MQ0=0;MQRankSum=-0.859;QD=35.14;ReadPosRankSum=-0.141;VQSLOD=3.8467;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,27:29:75.20:1009,75,0	0/0:9,0:9:27.08:0,27,324	0/0:12,0:12:33.10:0,33,395	0/0:4,0:4:12.04:0,12,144	0/0:41,0:40:99:0,117,1402	0/0:20,0:20:54.16:0,54,648	0/0:10,0:10:30.09:0,30,360	0/0:27,0:27:75.21:0,75,882	0/0:23,0:23:66.19:0,66,781	0/0:25,0:25:72.17:0,72,823	0/0:18,0:18:54.16:0,54,638	1/1:2,14:16:42.14:588,42,0	0/0:17,0:17:51.16:0,51,611	1/1:0,21:21:60.20:840,60,0	1/1:1,19:20:51.17:714,51,0	0/0:26,0:26:72.22:0,72,863	0/0:11,0:11:33.10:0,33,396	0/0:8,0:8:24.07:0,24,288	0/0:10,0:10:24.07:0,24,288	0/0:36,0:36:99:0,105,1249	0/0:16,0:16:42.13:0,42,504	0/0:24,0:24:66.19:0,66,782	1/1:3,18:21:45.15:630,45,0	1/1:2,7:9:21.07:294,21,0	0/0:29,0:29:87.26:0,87,1034	0/0:33,0:33:96.29:0,96,1152	0/0:36,0:36:99:0,102,1216	0/0:6,0:6:18.06:0,18,216
chr10	33075631	.	AAAG	A	1899.42	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=8.810;DP=490;FS=2.108;HRun=0;HaplotypeScore=69.5016;InbreedingCoeff=0.9844;MQ=82.54;MQ0=1;MQRankSum=-5.362;QD=38.76;ReadPosRankSum=0.983;VQSLOD=4.3655;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:63.22:0,63,1466	0/0:7,0:7:21.07:0,21,497	0/0:17,0:17:51.10:0,51,1064	0/0:12,0:12:33.10:0,33,677	0/0:25,0:25:75.24:0,75,1728	0/0:20,0:20:57.19:0,57,1271	0/0:14,0:14:39.13:0,39,903	0/0:35,0:35:96.33:0,96,2199	0/0:14,0:14:42.14:0,42,949	0/0:24,0:23:69.24:0,69,1600	0/0:20,0:20:60.21:0,60,1418	1/1:2,15:17:42.14:736,42,0	0/0:24,0:24:69.24:0,69,1614	1/1:1,13:14:30.10:529,30,0	0/0:17,0:17:51.18:0,51,1185	0/0:18,0:18:51.18:0,51,1198	0/0:19,0:19:57.20:0,57,1348	0/0:4,0:4:12.04:0,12,244	0/0:19,0:19:57.20:0,57,1349	0/0:22,0:22:66.21:0,66,1512	0/0:15,0:15:45.15:0,45,1039	0/0:16,0:16:48.16:0,48,1107	1/1:0,13:13:30.10:529,30,0	1/1:0,5:5:15.05:264,15,0	0/0:23,0:23:69.24:0,69,1631	0/0:21,0:21:63.21:0,63,1445	0/0:24,0:24:72.25:0,72,1703	0/0:9,0:9:21.07:0,21,496
chr10	33076132	.	CTG	C	260.12	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.623;DP=617;FS=2.807;HRun=0;HaplotypeScore=82.7911;InbreedingCoeff=0.9051;MQ=85.98;MQ0=0;MQRankSum=-1.064;QD=23.65;ReadPosRankSum=-1.171;VQSLOD=3.8028;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,10:11:24.08:353,24,0	0/0:9,0:9:27.09:0,27,506	0/0:23,0:23:66.20:0,66,1164	0/0:17,0:17:8.14:0,8,629	0/0:24,0:24:72.25:0,72,1333	0/0:29,0:29:81.28:0,81,1517	0/0:13,0:13:39.13:0,39,730	0/0:30,0:30:84.29:0,84,1571	0/0:24,0:24:72.23:0,72,1316	0/0:25,0:25:75.26:0,75,1406	0/0:14,0:14:42.14:0,42,787	0/0:28,0:28:84.29:0,84,1566	0/0:44,0:44:99:0,129,2403	0/0:30,0:30:81.28:0,81,1516	0/0:37,0:37:99:0,111,2069	0/0:27,0:27:78.27:0,78,1461	0/0:23,0:23:66.23:0,66,1236	0/0:11,0:11:27.09:0,27,505	0/0:13,0:13:39.13:0,39,731	0/0:24,0:24:69.24:0,69,1285	0/0:14,0:14:39.13:0,39,730	0/0:22,0:22:66.23:0,66,1233	0/0:22,0:22:66.19:0,66,1156	0/0:22,0:22:63.22:0,63,1167	0/0:15,0:15:45.15:0,45,824	0/0:25,0:25:75.26:0,75,1400	0/0:37,0:37:99:0,111,2026	0/0:4,0:4:12.04:0,12,225
chr10	33076333	.	G	GA	13787.87	PASS	AB=1.000;AC=54;AF=0.964;AN=56;BaseQRankSum=-5.331;DP=527;FS=0.000;HRun=8;HaplotypeScore=51.9979;InbreedingCoeff=0.0933;MQ=78.33;MQ0=0;MQRankSum=-5.862;QD=26.16;ReadPosRankSum=3.902;VQSLOD=5.3015;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,0:19:50.97:256,51,0	1/1:1,6:7:15.04:173,15,0	0/1:14,0:12:14.43:14,0,111	0/1:19,0:17:8.96:9,0,103	1/1:4,28:32:90.26:1030,90,0	1/1:0,21:21:60.18:692,60,0	1/1:0,14:14:39.12:450,39,0	1/1:6,25:31:75.21:856,75,0	1/1:0,12:12:33.10:381,33,0	1/1:3,19:22:57.17:658,57,0	1/1:2,19:21:54.04:579,54,0	1/1:1,21:22:60.18:693,60,0	1/1:4,12:16:33.10:381,33,0	1/1:1,16:17:39.12:450,39,0	1/1:1,24:25:65.99:762,66,0	1/1:1,17:18:51.15:588,51,0	1/1:6,20:26:48.14:554,48,0	1/1:2,14:16:36.11:415,36,0	1/1:3,13:16:39.12:450,39,0	1/1:3,17:20:51.15:589,51,0	1/1:0,5:5:12.04:138,12,0	1/1:1,16:17:45.09:505,45,0	1/1:5,18:23:48.14:554,48,0	1/1:2,8:10:15.04:173,15,0	1/1:1,15:16:42.12:485,42,0	1/1:4,17:21:51.15:588,51,0	1/1:4,28:32:84.25:970,84,0	1/1:1,13:15:35.94:395,36,0
chr10	33076492	.	T	TG	18726.33	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=2.107;DP=487;FS=0.523;HRun=2;HaplotypeScore=73.4235;InbreedingCoeff=0.9857;MQ=79.73;MQ0=0;MQRankSum=-6.091;QD=44.06;ReadPosRankSum=3.654;VQSLOD=4.2196;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:60.20:0,60,832	1/1:0,8:8:21.07:336,21,0	0/0:15,0:15:42:0,42,525	0/0:9,0:9:18.02:0,18,224	1/1:2,26:28:72.25:1151,72,0	1/1:0,18:18:51.17:815,51,0	1/1:1,12:13:30.10:480,30,0	1/1:0,18:18:50.85:815,51,0	1/1:1,9:10:27.09:431,27,0	1/1:0,26:26:78.27:1245,78,0	1/1:2,29:31:87.30:1390,87,0	1/1:0,17:17:45.15:719,45,0	1/1:0,14:14:36.12:575,36,0	1/1:1,11:12:33.11:528,33,0	0/0:16,0:16:48.16:0,48,672	1/1:0,14:14:39.13:624,39,0	1/1:0,22:22:63.21:1007,63,0	1/1:2,5:7:21.07:320,21,0	1/1:1,17:18:51.17:793,51,0	1/1:0,29:29:84.29:1343,84,0	1/1:0,10:10:30.10:480,30,0	1/1:0,14:14:39.13:624,39,0	1/1:0,30:30:84.29:1341,84,0	1/1:0,4:4:12.04:192,12,0	1/1:0,28:28:81.28:1295,81,0	1/1:3,11:14:39.12:602,39,0	1/1:2,27:30:78.27:1238,78,0	1/1:0,10:10:24.08:383,24,0
chr10	33077547	.	A	AT	11504.77	PASS	AB=1.000;AC=41;AF=0.732;AN=56;BaseQRankSum=-11.298;DP=468;FS=5.079;HRun=7;HaplotypeScore=43.0807;InbreedingCoeff=0.8743;MQ=64.54;MQ0=0;MQRankSum=0.388;QD=30.60;ReadPosRankSum=0.803;VQSLOD=5.1090;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:7:21.03:0,21,203	1/1:0,5:5:15.05:181,15,0	0/1:4,0:4:14.39:14,0,24	0/0:5,0:5:2.96:0,3,29	1/1:3,24:27:40.23:768,40,0	1/1:1,22:23:63.19:761,63,0	1/1:2,7:9:21.06:254,21,0	1/1:4,24:28:73.09:858,73,0	1/1:2,15:17:47.88:556,48,0	1/1:3,21:24:37.36:732,37,0	1/1:1,19:20:57.17:689,57,0	0/0:16,0:16:39.05:0,39,371	1/1:2,14:16:42.13:506,42,0	0/0:16,0:16:48.08:0,48,463	0/0:18,0:18:48.08:0,48,463	1/1:2,16:18:42.13:507,42,0	1/1:2,16:18:47.18:549,47,0	1/1:1,14:15:39.12:470,39,0	1/1:2,16:18:48.15:579,48,0	1/1:4,23:27:60.11:693,60,0	1/1:1,12:13:36.11:435,36,0	1/1:0,14:14:39.08:455,39,0	0/0:22,0:22:57.04:0,57,541	0/0:8,0:8:18.02:0,18,174	1/1:2,32:34:87.27:1051,87,0	1/1:3,20:23:63.19:758,63,0	1/1:3,12:15:33.10:399,33,0	1/1:0,8:8:24.07:290,24,0
chr10	33081588	.	CT	C	12037.89	PASS	AB=1.000;AC=53;AF=0.946;AN=56;BaseQRankSum=-3.673;DP=585;FS=11.634;HRun=10;HaplotypeScore=65.1690;InbreedingCoeff=0.6705;MQ=68.36;MQ0=2;MQRankSum=-1.603;QD=21.12;ReadPosRankSum=3.568;VQSLOD=5.2255;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,19:22:53.98:469,54,0	1/1:0,14:14:41.99:365,42,0	0/0:15,0:14:1.83:0,2,179	0/1:10,0:8:0.76:1,0,46	1/1:2,30:32:47.79:644,48,0	1/1:0,21:21:59.99:521,60,0	1/1:5,14:19:26.41:300,26,0	1/1:5,24:28:68.97:598,69,0	1/1:1,13:14:32.99:286,33,0	1/1:2,21:22:62.98:547,63,0	1/1:1,19:20:53.99:468,54,0	1/1:4,18:22:44.99:391,45,0	1/1:3,21:24:53.99:469,54,0	1/1:2,22:24:62.98:547,63,0	1/1:3,21:24:56.99:495,57,0	1/1:1,19:20:47.99:417,48,0	1/1:2,23:25:62.98:547,63,0	1/1:2,12:14:32.99:287,33,0	1/1:2,28:30:83.98:728,84,0	1/1:3,19:22:56.98:495,57,0	1/1:4,22:26:59.98:521,60,0	1/1:3,22:25:56.99:495,57,0	1/1:3,21:24:53.99:469,54,0	1/1:1,13:14:38.99:339,39,0	1/1:2,15:17:38.98:339,39,0	1/1:1,22:23:65.99:573,66,0	1/1:3,23:26:65.97:573,66,0	1/1:0,6:6:18:156,18,0
chr10	33082844	.	C	CT	2103.46	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-9.054;DP=380;FS=55.563;HRun=7;HaplotypeScore=37.3392;InbreedingCoeff=0.9641;MQ=78.29;MQ0=0;MQRankSum=0.892;QD=26.97;ReadPosRankSum=0.901;VQSLOD=-0.3462;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:57.08:0,57,550	0/0:3,0:3:6.01:0,6,58	0/0:11,0:11:18.02:0,18,174	0/0:7,0:7:20.95:0,21,182	0/0:19,0:19:57.08:0,57,546	0/0:8,0:8:18.03:0,18,174	0/0:9,0:9:24.03:0,24,228	0/0:20,0:20:57.07:0,57,542	0/0:8,0:8:24.02:0,24,226	0/0:15,0:15:39.06:0,39,377	0/0:12,0:12:36.06:0,36,348	1/1:1,8:9:21.06:254,21,0	0/0:14,0:14:39.06:0,39,376	1/1:3,15:18:42.13:507,42,0	1/1:4,25:29:72.22:864,72,0	0/0:13,0:13:36.06:0,36,347	0/0:22,0:22:57.02:0,57,534	0/0:11,0:11:26.19:0,26,250	0/0:9,0:9:27.04:0,27,257	0/0:18,0:18:48.05:0,48,464	0/0:9,0:9:24.01:0,24,225	0/0:6,0:6:15.02:0,15,145	1/1:1,11:12:24.07:290,24,0	1/1:0,10:10:30.09:362,30,0	0/0:20,0:20:51.07:0,51,493	0/0:16,0:16:44.99:0,45,423	0/0:22,0:22:57.09:0,57,550	0/0:9,0:9:27.04:0,27,261
chr10	33083816	.	AAAC	A	3454.97	PASS	AB=0.938;AC=11;AF=0.196;AN=56;BaseQRankSum=10.873;DP=736;FS=0.000;HRun=0;HaplotypeScore=94.5206;InbreedingCoeff=0.9067;MQ=49.99;MQ0=3;MQRankSum=-1.053;QD=26.37;ReadPosRankSum=1.589;VQSLOD=3.7310;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,120,2501	0/0:6,0:6:11.61:0,12,259	0/0:18,0:10:26.99:0,27,480	0/1:14,1:12:4.67:5,0,602	0/0:41,0:40:99:0,102,2125	0/0:28,0:28:48.16:0,48,1037	0/0:30,0:30:71.95:0,72,1450	0/0:27,0:25:69.21:0,69,1350	0/0:32,0:32:75.24:0,75,1557	0/0:22,0:21:54.18:0,54,1161	0/0:15,0:15:39.13:0,39,816	1/1:0,19:16:32.95:523,33,0	0/0:28,0:28:56.84:0,57,1139	1/1:2,25:27:30.10:503,30,0	1/1:1,20:21:42.05:621,42,0	0/0:29,0:29:69.24:0,69,1492	0/0:31,0:31:72.24:0,72,1533	0/0:22,0:22:60.20:0,60,1301	0/0:24,0:14:45.14:0,45,902	0/0:37,0:37:99:0,108,2170	0/0:30,0:30:87.28:0,87,1822	0/0:31,0:31:66.16:0,66,1386	1/1:0,29:29:69.14:1097,69,0	1/1:0,20:20:42.14:706,42,0	0/0:17,0:17:42.14:0,42,912	0/0:33,0:33:99:0,99,2042	0/0:35,0:35:84.11:0,84,1708	0/0:20,0:20:54:0,54,1172
chr10	33084155	.	CAAA	C	945.85	PASS	AC=10;AF=0.200;AN=50;BaseQRankSum=5.071;DP=777;FS=11.230;HRun=5;HaplotypeScore=82.5659;InbreedingCoeff=0.9254;MQ=38.96;MQ0=182;MQRankSum=-5.215;QD=9.09;ReadPosRankSum=2.182;VQSLOD=-0.7052;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:18:27.06:0,27,503	0/0:12,0:11:21.03:0,21,378	./.	./.	0/0:32,0:28:53.96:0,54,1127	0/0:21,0:15:18.06:0,18,412	0/0:26,0:11:21.06:0,21,383	./.	0/0:34,0:31:51.60:0,52,1053	0/0:45,0:30:84.28:0,84,1796	0/0:34,0:27:48.15:0,48,973	1/1:2,22:16:15.05:250,15,0	0/0:38,0:37:57.07:0,57,1081	1/1:6,18:15:9.03:150,9,0	1/1:2,15:12:12.04:200,12,0	0/0:42,0:36:66.20:0,66,1277	0/0:44,0:28:36.12:0,36,774	0/0:24,0:15:30.04:0,30,569	0/0:32,0:16:42.10:0,42,830	0/0:38,0:36:99:0,105,2129	0/0:37,0:19:27.08:0,27,578	0/0:30,0:27:39.12:0,39,725	1/1:5,21:22:27.09:451,27,0	1/1:9,4:2:3.01:50,3,0	0/0:18,0:17:27.07:0,27,470	0/0:38,0:33:84.25:0,84,1786	0/0:35,0:26:45.09:0,45,1036	0/0:25,0:12:33.11:0,33,761
chr10	33090023	.	T	TA	11825.04	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-11.846;DP=504;FS=10.044;HRun=0;HaplotypeScore=44.0617;InbreedingCoeff=0.9968;MQ=75.15;MQ0=0;MQRankSum=-2.010;QD=43.47;ReadPosRankSum=-1.841;VQSLOD=3.7282;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,29:29:75.25:1186,75,0	1/1:0,8:8:24.08:383,24,0	0/0:11,0:11:29.30:0,29,369	0/0:9,0:9:17.22:0,17,252	0/0:33,0:33:93.31:0,93,1300	0/0:23,0:23:69.21:0,69,944	0/0:12,0:12:36.11:0,36,486	1/1:2,34:36:99:1529,99,0	0/0:14,0:14:42.14:0,42,587	1/1:0,26:26:78.27:1240,78,0	1/1:0,24:24:63.21:1006,63,0	0/0:17,0:17:51.11:0,51,644	1/1:1,16:17:45.15:710,45,0	0/0:14,0:14:42.14:0,42,577	0/0:19,0:19:57.19:0,57,796	1/1:0,8:8:21.07:335,21,0	0/0:20,0:20:60.18:0,60,820	0/0:22,0:22:63.21:0,63,880	1/1:0,13:13:38.71:486,39,0	1/1:2,29:31:84.29:1342,84,0	1/1:0,13:13:36.12:575,36,0	1/1:0,8:8:24.08:382,24,0	0/0:26,0:26:78.25:0,78,1072	0/0:12,0:12:36.09:0,36,469	1/1:0,9:9:21.07:335,21,0	1/1:0,15:15:45.11:688,45,0	1/1:0,20:20:57.19:908,57,0	1/1:0,15:15:45.15:718,45,0
chr10	33091985	.	AGTGTGTGTGT	A	405.83	PASS	AB=0.882;AC=7;AF=0.140;AN=50;BaseQRankSum=2.311;DP=452;FS=3.764;HRun=0;HaplotypeScore=120.9218;InbreedingCoeff=0.3951;MQ=58.55;MQ0=32;MQRankSum=-3.754;QD=6.34;ReadPosRankSum=-0.320;VQSLOD=2.2108;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/0:3,0:3:6.02:0,6,269	./.	./.	0/0:12,0:8:3.01:0,3,96	0/0:15,0:15:12.04:0,12,431	0/0:13,0:12:12.04:0,12,400	0/0:20,0:20:9.03:0,9,212	0/0:13,0:13:12.04:0,12,536	0/0:17,0:14:9.03:0,9,411	0/0:16,0:14:12.04:0,12,471	1/1:15,5:15:6.02:176,6,0	0/0:13,0:13:2.85:0,3,143	1/1:10,4:13:6.02:177,6,0	0/0:14,0:19:18.06:0,18,319	0/0:19,0:19:15.05:0,15,578	0/0:14,0:21:24.07:0,24,546	0/0:14,0:15:3.01:0,3,91	0/0:12,0:10:15.05:0,15,610	0/0:13,0:12:9.03:0,9,385	0/0:20,0:19:3.01:0,3,69	0/0:15,0:12:8.99:0,9,180	1/1:13,2:14:3.01:88,3,0	0/1:13,2:15:82.24:82,0,107	0/0:20,0:16:9.50:0,10,363	0/0:16,0:14:18.06:0,18,630	0/0:21,0:20:9.03:0,9,419	0/0:8,0:7:6.02:0,6,106
chr10	33092060	.	TA	T	347.18	PASS	AB=0.939;AC=5;AF=0.093;AN=54;BaseQRankSum=0.130;DP=420;FS=14.575;HRun=12;HaplotypeScore=79.6571;InbreedingCoeff=0.3042;MQ=82.01;MQ0=1;MQRankSum=-0.633;QD=4.57;ReadPosRankSum=1.802;VQSLOD=0.5446;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,21:26:37.23:422,37,0	0/0:6,0:6:12.16:0,12,69	0/0:33,3:25:2.65:0,3,190	0/1:31,1:20:14.06:14,0,90	0/0:21,1:25:31.43:0,31,453	0/1:7,2:11:22.75:23,0,127	0/0:13,1:14:12.55:0,13,280	0/0:21,0:21:48.64:0,49,282	0/0:12,0:12:27.04:0,27,268	0/0:17,0:17:27.80:0,28,202	0/0:9,0:9:22.93:0,23,129	0/0:10,0:11:23.88:0,24,227	0/0:9,0:9:17.36:0,17,92	0/0:9,0:10:18.96:0,19,220	0/0:16,0:16:17.46:0,17,254	0/0:15,0:15:20.29:0,20,172	0/0:17,0:18:41.87:0,42,393	0/1:7,0:6:1.48:1,0,110	0/0:20,0:20:50.67:0,51,274	0/0:17,0:17:43.40:0,43,232	0/0:4,0:4:10.04:0,10,58	0/0:13,0:13:6.79:0,7,114	0/0:23,1:24:31.50:0,31,484	0/0:14,0:14:23.97:0,24,230	0/0:10,0:10:20.29:0,20,115	0/0:12,0:12:28.48:0,28,153	0/0:11,0:11:23.19:0,23,124	./.
chr10	33092072	.	A	AC	4915.11	PASS	AB=0.556;AC=25;AF=0.463;AN=54;BaseQRankSum=-8.218;DP=450;FS=19.322;HRun=3;HaplotypeScore=67.3002;InbreedingCoeff=0.9079;MQ=88.26;MQ0=1;MQRankSum=0.907;QD=24.70;ReadPosRankSum=1.392;VQSLOD=3.2912;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:79.54:0,80,499	1/1:2,6:8:9.03:115,9,0	0/0:36,0:27:45.29:0,45,471	0/0:26,0:20:26.60:0,27,188	0/0:30,0:30:49.86:0,50,683	0/0:9,0:9:16.29:0,16,195	0/0:13,0:13:35.81:0,36,366	1/1:3,18:23:58.47:610,58,0	0/0:10,0:10:27.07:0,27,310	1/1:1,19:20:57.09:651,57,0	1/1:4,8:13:12.64:208,13,0	0/0:14,0:14:21.38:0,21,256	1/1:0,10:10:18.06:225,18,0	0/0:10,0:10:16.06:0,16,242	0/0:16,0:16:42.06:0,42,439	1/1:2,16:18:30.89:413,31,0	0/0:19,0:19:41.62:0,42,461	0/0:7,0:6:14.99:0,15,152	1/1:1,18:20:57.12:660,57,0	1/1:1,21:22:48.07:581,48,0	0/1:1,4:5:12.60:100,0,13	1/1:8,8:16:37.39:420,37,0	0/0:20,0:20:50.56:0,51,554	0/0:9,0:9:24.06:0,24,269	1/1:2,11:14:21.06:259,21,0	1/1:0,15:15:38.10:407,38,0	1/1:2,13:15:20.89:267,21,0	./.
chr10	33092707	.	G	GA	933.69	PASS	AB=0.964;AC=4;AF=0.071;AN=56;BaseQRankSum=-5.047;DP=628;FS=9.290;HRun=9;HaplotypeScore=60.1038;InbreedingCoeff=0.4902;MQ=60.58;MQ0=8;MQRankSum=1.692;QD=9.15;ReadPosRankSum=1.630;VQSLOD=1.1495;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,36:43:95.93:1024,96,0	0/0:7,0:7:17.99:0,18,156	0/1:46,0:17:12.56:13,0,113	0/0:32,0:11:8.32:0,8,62	0/0:21,0:22:61.97:0,62,516	0/1:12,1:13:3.19:3,0,204	0/0:12,0:12:32.97:0,33,282	0/0:32,0:32:71.96:0,72,624	0/0:23,0:23:65.95:0,66,565	0/0:23,0:23:59.99:0,60,520	0/0:20,0:20:56.79:0,57,468	0/0:18,0:18:44.98:0,45,390	0/0:20,0:20:53.90:0,54,454	0/0:19,0:19:53.97:0,54,464	0/0:25,0:25:74.94:0,75,644	0/0:18,0:18:50.95:0,51,433	0/0:37,0:37:86.97:0,87,754	0/0:16,0:16:41.99:0,42,364	0/0:26,0:26:64.58:0,65,567	0/0:34,0:34:95.95:0,96,828	0/0:24,0:24:59.93:0,60,513	0/0:24,0:24:59.87:0,60,502	0/0:6,0:6:15:0,15,130	0/0:12,0:12:23.98:0,24,208	0/0:14,0:15:41.02:0,41,341	0/0:28,0:28:80.98:0,81,703	0/0:18,1:18:21.21:0,21,399	0/0:14,0:14:41.99:0,42,365
chr10	33093984	.	C	CTT	959.23	PASS	AC=44;AF=0.957;AN=46;DP=70;FS=0.000;HRun=2;HaplotypeScore=91.3548;InbreedingCoeff=0.0877;MQ=51.42;MQ0=0;QD=14.11;VQSLOD=0.6939;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,3:3:5.37:28,5,0	./.	1/1:2,0:2:2.04:6,2,0	./.	1/1:3,5:8:19.98:104,20,0	1/1:0,2:2:5.78:30,6,0	1/1:1,0:1:2.94:18,3,0	1/1:3,6:9:26.67:178,27,0	1/1:1,1:2:5.83:33,6,0	1/1:0,2:2:5.96:44,6,0	1/1:0,3:3:8.22:36,8,0	./.	1/1:0,1:1:2.97:20,3,0	1/1:1,0:1:2.94:18,3,0	1/1:1,3:4:11.23:58,11,0	1/1:0,5:5:14.46:76,14,0	1/1:1,2:3:5.82:32,6,0	1/1:0,1:1:2.97:20,3,0	1/1:0,3:3:8.92:68,9,0	1/1:0,2:2:5.75:29,6,0	./.	./.	1/1:0,6:6:17.16:87,17,0	0/0:0,2:2:0.47:0,0,1	1/1:0,3:3:8.59:43,9,0	1/1:2,1:3:5.93:40,6,0	1/1:2,1:3:8.56:47,9,0	1/1:0,1:1:2.96:19,3,0
chr10	33094210	.	CATTCCTAAACATTCCTAT	C	9179.48	PASS	AC=30;AF=0.625;AN=48;BaseQRankSum=10.244;DP=195;FS=1.223;HRun=0;HaplotypeScore=110.4526;InbreedingCoeff=0.8287;MQ=74.13;MQ0=0;MQRankSum=-7.406;QD=101.99;ReadPosRankSum=2.952;VQSLOD=4.8759;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,4:4:6.02:308,6,0	./.	0/0:11,0:11:33.11:0,33,1696	0/0:2,0:2:6.02:0,6,126	0/0:17,0:17:51.18:0,51,4403	0/0:8,0:8:24.07:0,24,1608	0/0:11,0:11:30.10:0,30,2268	1/1:0,17:17:45.15:1350,45,0	0/0:14,0:14:39.13:0,39,2740	1/1:0,7:7:18.06:905,18,0	1/1:0,1:1:3.01:160,3,0	1/1:0,7:6:12.04:637,12,0	1/1:0,7:7:15.05:791,15,0	1/1:0,8:8:18.06:952,18,0	0/0:18,0:18:54.19:0,54,4077	1/1:0,7:7:18.06:954,18,0	0/0:14,0:14:42.14:0,42,3444	0/0:9,0:9:27.09:0,27,2377	1/1:0,7:7:18.06:962,18,0	1/1:0,3:3:6.02:321,6,0	1/1:1,0:1:3:25,3,0	./.	1/1:0,2:1:3.01:154,3,0	1/1:0,8:8:9.50:298,10,0	./.	1/1:0,7:7:18.06:881,18,0	1/1:0,4:4:9.03:481,9,0	./.
chr10	33094355	.	C	CTTTT	4164.10	PASS	AB=0.820;AC=35;AF=0.625;AN=56;BaseQRankSum=-3.808;DP=381;FS=4.007;HRun=12;HaplotypeScore=71.3034;InbreedingCoeff=0.4717;MQ=69.64;MQ0=11;MQRankSum=-7.047;QD=14.66;ReadPosRankSum=-2.334;VQSLOD=0.2579;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:9:19.21:0,19,240	1/1:1,0:5:12.03:161,12,0	0/1:62,0:24:21.74:22,0,207	0/1:43,0:17:10.05:10,0,228	0/1:3,0:14:2.48:2,0,14	0/1:3,0:10:3.54:22,0,4	0/0:4,0:10:7.94:0,8,52	1/1:11,6:22:41.98:628,42,0	0/0:3,0:11:12.17:0,12,94	1/1:1,2:4:9.03:175,9,0	1/1:2,4:7:12.04:243,12,0	0/0:11,0:12:21.74:0,22,249	1/1:0,5:9:14.97:288,15,0	0/1:9,0:9:7.89:8,0,204	0/0:17,0:19:43.16:0,43,523	1/1:0,2:2:6.02:136,6,0	0/0:4,0:22:5.57:0,6,96	0/1:7,0:15:42.99:53,0,43	1/1:5,1:7:11.87:139,12,0	1/1:6,3:11:30.09:488,30,0	1/1:0,3:4:11.99:212,12,0	1/1:0,5:5:15.05:339,15,0	0/0:12,0:14:15.61:0,16,381	0/1:9,0:8:2.90:3,0,289	1/1:5,4:10:6.02:105,6,0	1/1:5,6:11:27.04:495,27,0	1/1:6,0:8:18.06:317,18,0	1/1:4,4:8:15.05:318,15,0
chr10	33095560	.	TTC	T	33.62	PASS	AB=0.810;AC=2;AF=0.036;AN=56;BaseQRankSum=3.926;DP=497;FS=20.573;HRun=0;HaplotypeScore=56.6196;InbreedingCoeff=-0.0390;MQ=74.51;MQ0=0;MQRankSum=-4.689;QD=0.96;ReadPosRankSum=0.749;VQSLOD=-0.5672;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:5:14.98:0,15,245	0/0:8,0:8:24.08:0,24,456	0/0:14,0:14:36.07:0,36,636	0/0:13,0:13:29.72:0,30,422	0/0:25,0:25:75.26:0,75,1408	0/0:20,0:20:60.21:0,60,1137	0/0:8,0:8:24.08:0,24,438	0/0:37,0:37:99:0,108,1958	0/0:24,0:24:72.23:0,72,1335	0/0:24,0:24:72.24:0,72,1333	0/0:28,0:28:84.26:0,84,1505	0/0:17,0:17:51.16:0,51,934	0/0:22,0:22:63.22:0,63,1177	0/0:16,0:16:48.15:0,48,871	0/0:28,0:28:84.27:0,84,1550	0/0:20,0:20:60.18:0,60,1078	0/1:10,5:15:92.62:93,0,524	0/1:17,3:20:29.70:30,0,767	0/0:14,0:14:42.14:0,42,783	0/0:32,0:32:96.31:0,96,1788	0/0:10,1:11:13.16:0,13,548	0/0:12,0:12:33.11:0,33,624	0/0:17,0:17:48.16:0,48,909	0/0:6,0:6:18.06:0,18,341	0/0:13,0:13:39.13:0,39,735	0/0:15,0:15:45.15:0,45,850	0/0:17,0:17:51.17:0,51,968	0/0:16,0:16:48.16:0,48,909
chr10	33097093	.	T	TACAC	3520.71	PASS	AB=0.857;AC=27;AF=0.519;AN=52;BaseQRankSum=-3.410;DP=613;FS=17.199;HRun=0;HaplotypeScore=123.6427;InbreedingCoeff=0.8174;MQ=64.20;MQ0=10;MQRankSum=-2.060;QD=12.71;ReadPosRankSum=0.146;VQSLOD=2.3777;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:20:6.01:0,6,56	1/1:9,1:10:15.03:215,15,0	./.	./.	0/0:20,0:22:15.03:0,15,207	0/0:22,0:22:21.05:0,21,301	0/0:12,0:16:23.97:0,24,334	1/1:25,0:23:9.01:121,9,0	0/0:23,0:22:42.09:0,42,562	1/1:8,5:13:20.94:286,21,0	1/1:6,7:16:18.06:403,18,0	0/0:27,0:28:38.44:0,38,486	1/1:10,9:23:8.21:184,8,0	0/0:24,0:24:21.05:0,21,299	0/0:25,0:28:42.14:0,42,633	1/1:7,7:15:5.88:141,6,0	0/0:35,0:35:54.11:0,54,755	0/0:16,0:16:3.81:0,4,228	1/1:20,0:18:12.03:205,12,0	1/1:18,7:28:13.60:350,14,0	1/1:25,0:22:10.44:230,10,0	1/1:9,11:22:15.04:354,15,0	0/0:19,0:19:30.05:0,30,396	0/0:22,0:22:14.59:0,15,359	1/1:11,13:27:21.07:496,21,0	1/1:17,0:17:17.98:187,18,0	1/1:14,8:27:12.42:283,12,0	0/1:5,1:6:40.78:65,0,41
chr10	33097293	.	CAGAG	C	502.30	PASS	AB=0.989;AC=26;AF=0.520;AN=50;BaseQRankSum=0.565;DP=441;FS=1.086;HRun=0;HaplotypeScore=125.3697;InbreedingCoeff=0.3335;MQ=67.98;MQ0=5;MQRankSum=-0.128;QD=1.87;ReadPosRankSum=0.180;VQSLOD=1.7496;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:23:0.96:1,0,63	0/0:10,0:10:3.01:0,3,35	./.	0/1:38,0:22:0:0,0,0	0/0:13,0:15:2.60:0,3,8	1/1:13,0:14:5.86:52,6,0	1/1:12,0:13:5.83:34,6,0	0/0:24,0:23:9.59:0,10,65	0/1:9,0:10:13.62:27,0,14	0/1:22,0:21:1.64:2,0,39	0/1:8,0:8:0:0,0,0	1/1:7,4:11:2.99:42,3,0	0/0:16,0:16:3.01:0,3,40	1/1:13,0:13:6.02:93,6,0	0/0:11,0:12:17.77:0,18,252	0/1:15,0:15:0:0,0,0	1/1:14,0:18:11.89:186,12,0	0/1:6,0:6:1.31:1,0,37	1/1:12,0:12:0.90:7,1,0	./.	0/0:15,0:15:3.01:0,3,35	0/0:18,0:18:5.17:0,5,20	1/1:9,7:16:2.84:35,3,0	1/1:8,0:7:9.03:122,9,0	0/0:26,0:26:14.44:0,14,114	0/1:19,0:19:4:4,0,66	1/1:21,0:21:2.85:34,3,0	./.
chr10	33097332	.	AAG	A	2010.17	PASS	AB=0.794;AC=23;AF=0.442;AN=52;BaseQRankSum=1.542;DP=317;FS=3.031;HRun=0;HaplotypeScore=81.6752;InbreedingCoeff=-0.0967;MQ=43.51;MQ0=28;MQRankSum=3.921;QD=8.55;ReadPosRankSum=5.837;VQSLOD=3.1447;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:12:2.63:166,3,0	0/0:2,4:6:6.30:0,6,34	./.	./.	1/1:17,1:15:5.12:90,5,0	0/1:7,1:8:0.97:58,0,1	0/0:6,0:6:4.99:0,5,36	0/0:20,0:17:28.92:0,29,376	0/1:9,0:9:25.33:72,0,25	0/1:4,11:13:14.42:390,0,14	0/0:4,5:8:0.47:0,0,1	0/1:8,0:8:11.30:11,0,28	0/1:5,9:13:19.45:56,0,19	1/1:7,0:7:5.36:34,5,0	0/0:11,0:9:0.78:0,1,131	0/0:4,10:14:7.94:0,8,44	0/1:21,1:18:49.43:276,0,49	0/1:6,1:5:43.43:74,0,43	0/1:6,5:9:76.91:193,0,77	0/0:4,7:10:3:0,3,31	1/1:4,10:13:0.92:7,1,0	1/1:2,10:12:6.02:71,6,0	0/1:12,0:11:0:0,0,1	0/1:13,0:9:0.80:39,0,1	0/1:5,14:19:1.03:37,0,1	0/1:5,12:14:28.34:445,0,28	0/1:4,12:15:10.57:130,0,11	0/0:4,0:3:3.01:0,3,36
chr10	33097334	.	GGA	G	69.16	PASS	AB=0.952;AC=9;AF=0.225;AN=40;BaseQRankSum=1.905;DP=333;FS=4.558;HRun=0;HaplotypeScore=93.2794;InbreedingCoeff=0.2620;MQ=43.13;MQ0=28;MQRankSum=2.223;QD=0.91;ReadPosRankSum=1.905;VQSLOD=1.2966;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:14:0.33:0,0,1	0/0:6,0:6:3.01:0,3,38	./.	./.	0/1:18,0:15:0:0,0,0	1/1:7,0:8:2.67:14,3,0	0/0:8,0:8:0.47:0,0,1	0/0:24,0:21:6.02:0,6,73	1/1:7,3:10:6.02:65,6,0	0/0:17,0:15:0.62:0,1,33	./.	0/0:9,0:9:3:0,3,25	./.	0/0:9,0:9:2.95:0,3,19	0/0:10,0:9:3:0,3,32	0/0:15,0:15:2.97:0,3,20	1/1:19,2:17:6.01:65,6,0	0/1:5,1:4:26.22:26,0,38	0/0:11,0:9:3.95:0,4,42	./.	./.	./.	0/1:13,0:12:0:0,0,0	0/0:14,0:10:3:0,3,26	0/0:19,0:19:0:0,0,0	0/0:18,0:15:9.03:0,9,120	./.	0/0:4,0:3:2.97:0,3,20
chr10	33098002	.	A	AAC	1322.47	PASS	AB=0.796;AC=32;AF=0.640;AN=50;BaseQRankSum=2.480;DP=612;FS=2.329;HRun=0;HaplotypeScore=119.3284;InbreedingCoeff=0.3698;MQ=60.18;MQ0=15;MQRankSum=-3.619;QD=3.52;ReadPosRankSum=-2.634;VQSLOD=1.9160;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:34:10.99:0,11,54	1/1:12,0:12:8.86:64,9,0	./.	./.	0/0:26,0:28:20.86:0,21,199	0/0:19,0:20:15.49:0,15,134	0/1:17,0:19:3.36:3,0,31	1/1:29,0:25:14.99:140,15,0	0/0:28,0:30:35.89:0,36,354	1/1:22,0:21:8.93:69,9,0	1/1:9,0:9:0.47:1,0,0	0/1:18,5:25:59.03:73,0,59	1/1:19,0:17:8.76:91,9,0	0/1:15,6:21:27.10:38,0,27	0/0:31,0:32:41.74:0,42,394	1/1:23,0:21:17.40:117,17,0	0/0:22,0:24:23.83:0,24,212	0/1:18,5:22:26.09:78,0,26	1/1:15,0:14:3.47:27,3,0	1/1:13,0:13:5.95:58,6,0	1/1:16,0:15:2.99:24,3,0	1/1:10,0:10:5.88:41,6,0	0/1:5,7:12:34.30:117,0,34	0/1:27,11:37:99:153,0,105	1/1:31,0:31:17.85:133,18,0	1/1:17,0:15:18.83:145,19,0	1/1:21,0:20:14.97:124,15,0	./.
chr10	33099507	.	TA	T	800.78	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.868;DP=517;FS=3.457;HRun=6;HaplotypeScore=49.1908;InbreedingCoeff=0.9321;MQ=73.42;MQ0=0;MQRankSum=0.209;QD=25.83;ReadPosRankSum=0.040;VQSLOD=3.6237;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:36.12:0,36,472	0/0:9,0:9:24.08:0,24,316	0/0:13,0:13:36.10:0,36,435	0/0:10,0:10:18.73:0,19,262	0/0:38,0:38:99:0,105,1379	0/0:22,0:22:63.20:0,63,829	0/0:12,0:12:33.11:0,33,434	0/0:31,0:31:90.27:0,90,1155	0/0:20,0:20:60.20:0,60,789	0/0:26,0:26:72.23:0,72,947	0/0:22,0:22:57.17:0,57,735	0/0:13,0:13:36.12:0,36,474	0/0:23,0:23:57.15:0,57,731	0/0:18,0:18:51.15:0,51,651	0/0:22,0:22:66.20:0,66,842	0/0:19,0:19:57.18:0,57,736	0/0:9,0:9:27.09:0,27,355	0/0:12,0:12:33.11:0,33,432	0/0:28,0:28:80.99:0,81,1025	1/1:1,30:31:87.09:896,87,0	0/0:16,0:16:48.15:0,48,615	0/0:14,0:14:42.14:0,42,552	0/0:19,0:19:54.18:0,54,710	0/0:8,0:8:21.07:0,21,276	0/0:28,0:28:78.24:0,78,1013	0/0:20,0:20:57.19:0,57,750	0/0:18,0:18:54.16:0,54,695	0/0:3,0:3:9.03:0,9,117
chr10	33102987	.	CT	C	387.56	PASS	AC=6;AF=0.115;AN=52;BaseQRankSum=4.740;DP=341;FS=0.962;HRun=8;HaplotypeScore=39.7568;InbreedingCoeff=0.8325;MQ=70.10;MQ0=5;MQRankSum=2.536;QD=14.91;ReadPosRankSum=-0.529;VQSLOD=2.7711;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:45.06:0,45,511	0/0:3,0:3:6.02:0,6,72	./.	0/0:12,0:12:16.51:0,17,103	0/0:26,0:26:69.19:0,69,810	0/0:22,0:22:60.18:0,60,725	0/0:3,0:3:2.99:0,3,24	0/0:38,0:32:81.24:0,81,969	0/0:11,0:11:27.07:0,27,316	0/0:9,0:9:21.04:0,21,239	0/0:16,0:16:45.13:0,45,534	1/1:2,5:7:12.02:116,12,0	0/0:9,0:9:18.06:0,18,217	1/1:1,5:6:15.02:145,15,0	0/0:6,0:6:12.04:0,12,145	0/0:10,0:10:27.08:0,27,326	0/0:23,0:23:56.94:0,57,650	0/0:16,0:15:39.08:0,39,455	0/0:22,0:20:54.13:0,54,628	0/0:5,0:5:15.05:0,15,181	0/0:4,0:4:9.03:0,9,109	0/0:3,0:3:9.03:0,9,109	1/1:3,10:13:27.04:261,27,0	./.	0/0:17,0:17:48.14:0,48,571	0/0:11,0:11:27.08:0,27,326	0/0:13,0:12:33.08:0,33,377	0/0:8,0:8:24.07:0,24,290
chr10	33103280	.	G	GA	9937.30	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=14.064;DP=479;FS=1.316;HRun=7;HaplotypeScore=87.8360;InbreedingCoeff=0.9571;MQ=68.54;MQ0=1;MQRankSum=-2.181;QD=28.89;ReadPosRankSum=-0.954;VQSLOD=4.7432;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,32:36:84.25:998,84,0	1/1:0,6:6:18.06:216,18,0	0/0:9,0:9:17.76:0,18,152	0/0:6,0:5:7.67:0,8,45	0/0:11,0:11:33.05:0,33,319	0/0:17,0:17:48.06:0,48,457	0/0:9,0:9:27.04:0,27,261	1/1:6,32:39:99:1175,99,0	0/0:13,0:13:33.04:0,33,312	1/1:2,16:18:48.11:560,48,0	1/1:0,17:17:48.15:576,48,0	1/1:0,14:14:33.10:396,33,0	1/1:2,12:14:36.11:431,36,0	1/1:2,17:19:45.14:540,45,0	0/0:19,0:19:51.03:0,51,483	1/1:1,16:17:36.11:430,36,0	0/0:39,0:38:99:0,105,1014	0/0:12,0:12:36.06:0,36,348	1/1:3,13:15:36.11:432,36,0	1/1:1,15:16:42.09:487,42,0	1/1:0,7:7:21.06:252,21,0	1/1:0,9:9:27.08:324,27,0	1/1:2,12:14:33.10:392,33,0	1/1:1,13:14:36.11:433,36,0	1/1:3,20:23:63.65:744,64,0	1/1:7,27:34:81.02:920,81,0	1/1:5,17:23:38.98:597,39,0	1/1:5,3:8:3.01:36,3,0
chr10	33105842	.	TGGGG	T	13405.72	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-1.192;DP=580;FS=1.381;HRun=12;HaplotypeScore=151.5751;InbreedingCoeff=0.9950;MQ=68.89;MQ0=1;MQRankSum=-5.098;QD=32.46;ReadPosRankSum=4.465;VQSLOD=2.5777;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,25:28:42.06:634,42,0	1/1:1,9:10:23.67:363,24,0	0/0:26,0:25:48.13:0,48,946	0/0:17,0:15:21.07:0,21,368	0/0:5,0:10:20.60:0,21,132	0/0:9,0:13:20.55:0,21,129	0/0:11,0:23:31.12:0,31,196	1/1:12,13:25:53.84:710,54,0	0/0:5,0:15:27:0,27,169	1/1:5,20:25:62.98:929,63,0	1/1:7,11:18:33:478,33,0	1/1:8,21:29:78.11:1169,78,0	1/1:3,12:15:27:408,27,0	1/1:3,14:17:41.93:614,42,0	0/0:21,0:25:47.95:0,48,687	1/1:4,31:35:87.12:1315,87,0	0/0:10,0:25:47.67:0,48,289	0/0:3,0:12:20.61:0,21,153	1/1:5,12:17:32.87:451,33,0	1/1:8,17:25:53.92:813,54,0	1/1:7,18:25:44.46:680,44,0	1/1:4,16:20:41.92:635,42,0	1/1:5,10:15:29.92:453,30,0	1/1:4,19:23:51.04:772,51,0	1/1:4,12:16:36.12:542,36,0	1/1:5,24:29:71.60:1088,72,0	1/1:9,26:35:71.68:1079,72,0	1/1:0,6:6:18.06:272,18,0
chr10	33105851	.	GGGGT	G	6575.95	PASS	AB=0.995;AC=31;AF=0.554;AN=56;BaseQRankSum=14.449;DP=550;FS=2.011;HRun=0;HaplotypeScore=164.7343;InbreedingCoeff=0.4582;MQ=63.23;MQ0=1;MQRankSum=-7.027;QD=16.82;ReadPosRankSum=10.713;VQSLOD=3.6119;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:28:31.88:306,0,32	1/1:9,0:9:23.56:186,24,0	0/0:20,0:19:38.31:0,38,867	0/0:15,0:13:30.05:0,30,423	0/0:12,0:12:27.38:0,27,286	0/0:16,0:16:40.66:0,41,391	0/0:21,0:21:37.17:0,37,252	1/1:18,0:18:21.39:306,21,0	0/0:19,0:19:41.88:0,42,329	0/1:25,1:26:38.74:482,0,39	1/1:13,0:13:29.75:250,30,0	1/1:30,2:32:0.94:561,1,0	0/1:16,0:16:27.07:175,0,27	0/1:19,0:19:64.09:263,0,64	0/0:19,0:19:56.17:0,56,769	1/1:36,1:37:0.67:574,1,0	0/0:25,0:25:60.76:0,61,452	0/0:12,0:11:20.80:0,21,191	0/1:17,0:17:91.90:182,0,92	1/1:20,1:21:28.02:477,28,0	0/1:24,0:24:38.63:280,0,39	1/1:17,0:17:41.89:364,42,0	1/1:13,1:14:21.69:268,22,0	1/1:22,0:22:14.74:348,15,0	1/1:14,1:15:14.03:322,14,0	0/1:27,0:27:0.02:528,0,0	1/1:29,1:29:47.69:558,48,0	1/1:6,0:6:17.95:147,18,0
chr10	33106196	.	A	AGTGGGAGAGGAT	44075.75	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-6.348;DP=506;FS=2.122;HRun=0;HaplotypeScore=149.7163;InbreedingCoeff=0.9561;MQ=72.89;MQ0=0;MQRankSum=-16.729;QD=135.62;ReadPosRankSum=1.794;VQSLOD=5.3616;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,21:36:84.29:4904,84,0	1/1:2,2:4:12.04:619,12,0	0/0:22,0:21:60.10:0,60,1683	0/0:27,0:27:33.03:0,33,2023	0/0:6,0:6:15.05:0,15,570	0/0:21,0:20:57.20:0,57,2167	0/0:22,0:22:66.23:0,66,2412	1/1:19,13:34:96.32:5355,96,0	0/0:20,0:20:57.20:0,57,2140	1/1:10,10:25:72.23:3667,72,0	1/1:4,3:10:12.04:741,12,0	1/1:10,10:23:63.22:3419,63,0	1/1:7,14:23:60.21:3412,60,0	1/1:7,13:23:63.22:3351,63,0	0/0:19,0:19:57.17:0,57,1920	1/1:12,11:24:66.23:3619,66,0	0/0:32,0:32:93.32:0,93,3247	0/0:12,0:12:33.11:0,33,1248	1/1:8,7:17:45.15:2279,45,0	1/1:8,9:18:36.12:2056,36,0	1/1:5,2:11:12:563,12,0	1/1:4,4:8:18.06:1088,18,0	1/1:0,2:4:6.02:371,6,0	1/1:6,5:13:24.08:1383,24,0	1/1:7,4:14:24.08:1350,24,0	1/1:2,11:14:39.13:2410,39,0	1/1:5,13:20:48.16:2934,48,0	1/1:0,2:3:9.03:554,9,0
chr10	33106485	.	C	CCCTGTT	1354.47	PASS	AC=32;AF=0.800;AN=40;BaseQRankSum=-1.244;DP=135;FS=0.000;HRun=0;HaplotypeScore=21.2442;InbreedingCoeff=0.4566;MQ=64.20;MQ0=39;MQRankSum=-0.368;QD=15.93;ReadPosRankSum=-0.403;VQSLOD=1.8153;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	1/1:2,0:2:5.93:40,6,0	0/0:6,0:3:5.36:0,5,61	0/0:7,0:5:2.90:0,3,47	./.	./.	0/0:5,0:1:3.01:0,3,37	1/1:4,0:2:6.02:89,6,0	./.	1/1:4,0:3:9.03:133,9,0	1/1:0,3:5:3.01:102,3,0	1/1:3,5:12:3.01:103,3,0	1/1:1,2:2:3.01:102,3,0	1/1:6,0:5:6.02:76,6,0	0/0:4,0:4:6.02:0,6,75	1/1:3,0:3:9:98,9,0	./.	./.	1/1:4,0:1:1.25:3,1,0	1/1:5,0:5:11.87:80,12,0	1/1:9,0:3:1.36:2,1,0	1/1:2,0:2:5.93:40,6,0	1/1:3,0:3:8.90:60,9,0	./.	1/1:4,0:3:2.97:20,3,0	1/1:2,6:6:15.05:265,15,0	1/1:4,5:10:12.01:263,12,0	./.
chr10	33108262	.	A	AC	16413.86	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-14.479;DP=564;FS=5.584;HRun=1;HaplotypeScore=45.3043;InbreedingCoeff=0.9985;MQ=75.24;MQ0=0;MQRankSum=-2.359;QD=39.65;ReadPosRankSum=2.711;VQSLOD=5.2343;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,15:16:36.44:569,36,0	1/1:0,11:11:33.11:492,33,0	0/0:8,0:8:24.05:0,24,277	0/0:13,0:13:24.08:0,24,310	0/0:21,0:21:63.17:0,63,788	0/0:25,0:25:75.23:0,75,954	0/0:22,0:21:60.16:0,60,748	1/1:2,39:41:99:1688,117,0	0/0:16,0:16:48.14:0,48,608	1/1:1,25:26:78.12:1107,78,0	1/1:0,29:29:81.27:1206,81,0	1/1:2,15:17:36.12:539,36,0	1/1:1,17:18:48.16:716,48,0	1/1:1,21:22:57.19:854,57,0	0/0:22,0:22:66.20:0,66,843	1/1:1,19:20:48.16:717,48,0	0/0:14,0:14:36.11:0,36,454	0/0:9,0:9:24.06:0,24,295	1/1:0,20:20:60.20:898,60,0	1/1:1,30:31:84.28:1246,84,0	1/1:1,17:18:45.15:672,45,0	1/1:1,11:12:30.02:421,30,0	1/1:0,23:23:66.22:983,66,0	1/1:0,17:17:39.13:584,39,0	1/1:1,28:28:75.25:1124,75,0	1/1:1,24:25:72.09:1025,72,0	1/1:0,31:31:81.27:1212,81,0	1/1:0,8:8:24.08:359,24,0
chr10	33108624	.	ATAAAG	A	3136.76	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=8.704;DP=555;FS=11.863;HRun=0;HaplotypeScore=122.9862;InbreedingCoeff=0.9820;MQ=72.89;MQ0=0;MQRankSum=-10.203;QD=45.46;ReadPosRankSum=-0.061;VQSLOD=3.4781;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:48.08:0,48,1306	0/0:5,0:5:12.04:0,12,364	0/0:14,0:14:20.91:0,21,681	0/0:6,0:6:15.05:0,15,444	0/0:30,0:30:87.30:0,87,2587	0/0:20,0:19:57.20:0,57,1718	0/0:9,0:9:27.09:0,27,837	0/0:40,0:40:99:0,117,3439	0/0:9,0:9:27.09:0,27,834	0/0:36,0:36:99:0,105,3096	0/0:33,0:33:99:0,99,2986	1/1:0,20:20:54.14:1087,54,0	0/0:21,0:21:60.21:0,60,1829	1/1:0,20:19:45.11:898,45,0	0/0:25,0:25:72.23:0,72,2161	0/0:16,0:15:42.14:0,42,1300	0/0:17,0:17:45.10:0,45,1260	0/0:24,0:24:60.15:0,60,1723	0/0:16,0:16:42.14:0,42,1302	0/0:26,0:26:75.26:0,75,2324	0/0:7,0:7:21.07:0,21,650	0/0:19,0:19:51.16:0,51,1468	1/1:2,16:18:48.08:918,48,0	1/1:0,11:11:20.99:393,21,0	0/0:26,0:26:72.25:0,72,2170	0/0:35,0:34:99:0,102,3106	0/0:25,0:25:75.26:0,75,2322	0/0:7,0:7:21.05:0,21,533
chr10	33111556	.	GA	G	16772.28	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=17.828;DP=679;FS=4.501;HRun=2;HaplotypeScore=114.8311;InbreedingCoeff=0.9996;MQ=86.50;MQ0=0;MQRankSum=-4.091;QD=36.23;ReadPosRankSum=1.432;VQSLOD=4.5634;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,28:28:75.24:973,75,0	1/1:0,16:16:45.15:584,45,0	0/0:18,0:18:54.18:0,54,782	0/0:27,0:27:72.05:0,72,989	0/0:27,0:27:81.26:0,81,1194	0/0:26,0:26:75.23:0,75,1084	0/0:19,0:19:57.19:0,57,853	1/1:0,34:34:99:1263,102,0	0/0:25,0:25:75.25:0,75,1124	1/1:1,40:41:99:1543,120,0	1/1:0,18:18:51.17:662,51,0	1/1:0,19:19:54.18:701,54,0	1/1:0,23:23:66.21:857,66,0	1/1:0,30:30:81.26:1051,81,0	0/0:35,0:35:99:0,105,1553	1/1:1,28:29:36.31:968,36,0	0/0:18,0:18:54.18:0,54,809	0/0:21,0:21:60.20:0,60,899	1/1:1,18:19:54.13:657,54,0	1/1:0,18:18:51.17:662,51,0	1/1:0,24:24:66.21:857,66,0	1/1:1,12:13:36.12:467,36,0	1/1:1,22:23:60.09:776,60,0	1/1:0,25:25:69.22:896,69,0	1/1:0,27:27:78.25:1013,78,0	1/1:0,34:34:99:1324,102,0	1/1:1,33:34:93.24:1207,93,0	1/1:0,8:8:24.08:312,24,0
chr10	33111981	.	TATC	T	3611.06	PASS	AB=0.963;AC=35;AF=0.625;AN=56;BaseQRankSum=11.455;DP=500;FS=0.828;HRun=0;HaplotypeScore=172.1727;InbreedingCoeff=0.6389;MQ=51.77;MQ0=4;MQRankSum=-7.018;QD=12.41;ReadPosRankSum=-0.536;VQSLOD=3.0826;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:15,0:15:26.62:27,0,258	1/1:10,2:12:22.22:216,22,0	0/0:25,0:17:14.20:0,14,673	0/1:15,0:7:3.89:4,0,211	0/0:45,0:44:99:0,105,2193	0/0:23,0:23:60.21:0,60,1330	0/0:19,0:19:41.98:0,42,840	1/1:9,0:8:14.99:172,15,0	0/0:14,0:14:36.12:0,36,754	1/1:22,1:24:30.49:467,30,0	1/1:12,0:12:17.82:139,18,0	0/1:10,3:13:1.80:77,0,2	1/1:19,0:19:21.47:266,21,0	1/1:19,1:20:24.78:273,25,0	0/0:30,0:30:87.30:0,87,1796	1/1:16,0:16:16.32:126,16,0	0/0:21,0:21:33.26:0,33,880	0/0:31,0:31:66.23:0,66,1364	0/1:7,0:5:36.50:36,0,43	1/1:18,0:18:25.63:263,26,0	0/1:8,0:8:0.88:38,0,1	1/1:10,0:10:0.38:58,0,0	1/1:12,1:13:12.45:94,12,0	1/1:9,1:9:5.38:57,5,0	1/1:20,1:21:36.21:312,36,0	1/1:19,1:20:58.92:549,59,0	1/1:18,1:19:31.41:285,31,0	1/1:8,2:10:17.18:151,17,0
chr10	33111984	.	C	CT	5240.78	PASS	AB=0.963;AC=37;AF=0.661;AN=56;BaseQRankSum=11.578;DP=494;FS=1.280;HRun=1;HaplotypeScore=156.6888;InbreedingCoeff=0.7675;MQ=49.82;MQ0=4;MQRankSum=-4.627;QD=18.26;ReadPosRankSum=-0.519;VQSLOD=4.7764;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:14,2:16:3.37:3,0,260	1/1:4,8:12:23.92:250,24,0	0/0:24,0:15:23.79:0,24,491	0/1:19,0:7:3.89:4,0,139	0/0:43,0:42:99:0,105,1469	0/0:24,0:24:66.16:0,66,884	0/0:18,0:18:41.97:0,42,587	1/1:7,3:10:14.23:162,14,0	0/0:14,0:14:36.12:0,36,503	1/1:11,11:22:62.65:691,63,0	1/1:4,8:12:21.03:213,21,0	1/1:8,6:14:29.44:232,29,0	1/1:10,8:18:41.76:410,42,0	1/1:8,11:19:38.65:374,39,0	0/0:32,0:32:93.31:0,93,1297	1/1:4,10:14:18.04:198,18,0	0/0:21,1:22:31.60:0,32,682	0/0:29,0:29:66.22:0,66,923	0/1:7,0:4:36.41:58,0,36	1/1:6,11:17:41.84:430,42,0	1/1:6,2:8:4.78:56,5,0	1/1:4,5:9:14.82:148,15,0	1/1:7,7:14:15.03:160,15,0	1/1:8,4:11:5.78:79,6,0	1/1:7,10:17:39.09:434,39,0	1/1:7,13:20:60.18:738,60,0	1/1:6,11:17:41.82:428,42,0	1/1:6,4:10:17.63:174,18,0
chr10	33111987	.	CT	C	3176.17	PASS	AB=0.844;AC=33;AF=0.589;AN=56;BaseQRankSum=12.992;DP=480;FS=5.005;HRun=1;HaplotypeScore=157.5453;InbreedingCoeff=0.5523;MQ=49.31;MQ0=6;MQRankSum=-5.181;QD=12.31;ReadPosRankSum=0.829;VQSLOD=2.4898;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:18.58:0,19,304	1/1:5,8:13:18.94:156,19,0	0/0:22,0:12:0.35:0,0,418	0/1:19,1:7:22.82:23,0,169	0/0:43,0:42:99:0,105,1659	0/0:24,0:24:66.23:0,66,1052	0/0:19,0:19:42.11:0,42,658	0/1:6,2:8:19.72:20,0,209	0/0:15,0:15:39.12:0,39,597	1/1:9,11:20:55:517,55,0	1/1:3,8:11:20.90:171,21,0	1/1:8,6:14:26.17:166,26,0	1/1:9,8:17:37.26:283,37,0	1/1:7,11:18:33:254,33,0	0/0:31,0:31:93.20:0,93,1397	1/1:4,10:14:17.99:162,18,0	0/0:21,0:21:44.51:0,45,763	0/0:29,0:29:67.54:0,68,1066	0/1:8,0:5:41.78:42,0,100	1/1:4,11:15:31.48:252,31,0	0/1:6,2:8:30.37:30,0,38	1/1:4,5:9:9.29:73,9,0	0/1:7,7:14:73.62:109,0,74	1/1:7,3:10:2.95:29,3,0	1/1:5,10:15:32.95:279,33,0	1/1:6,12:18:34.77:468,35,0	1/1:5,11:16:33.06:261,33,0	1/1:6,4:10:8.71:87,9,0
chr10	33112005	.	A	ATC	1316.33	PASS	AB=0.989;AC=18;AF=0.321;AN=56;BaseQRankSum=6.722;DP=488;FS=11.516;HRun=0;HaplotypeScore=200.1686;InbreedingCoeff=-0.1981;MQ=43.97;MQ0=7;MQRankSum=-8.176;QD=5.65;ReadPosRankSum=0.148;VQSLOD=2.4325;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:14,3:17:39.25:95,0,39	0/1:10,0:10:37.42:73,0,37	0/0:31,0:8:23.99:0,24,313	0/0:19,0:4:11.97:0,12,142	0/0:37,0:37:93.17:0,93,1373	0/0:27,0:27:75.25:0,75,1146	0/0:16,0:16:33.11:0,33,503	0/0:12,0:12:36.05:0,36,522	0/0:18,0:18:42.14:0,42,637	0/1:15,0:15:88.96:160,0,89	1/1:13,0:13:11.74:73,12,0	0/1:21,0:21:44.35:44,0,156	0/1:15,0:15:35.09:35,0,49	0/1:17,0:17:39.29:39,0,134	0/0:30,0:30:90.29:0,90,1351	0/1:19,0:19:61.76:62,0,103	0/0:19,0:18:42.37:0,42,597	0/0:27,0:27:68.68:0,69,985	0/0:12,0:10:20.43:0,20,278	0/1:17,0:17:29.19:115,0,29	0/0:7,0:7:5.75:0,6,78	0/1:6,0:6:26.73:27,0,45	0/1:17,0:17:42.54:43,0,102	1/1:10,1:10:2.55:24,3,0	0/1:17,0:17:31.40:113,0,31	0/1:17,0:17:79.25:372,0,79	0/1:15,0:15:51.86:200,0,52	0/1:6,0:6:5.41:5,0,72
chr10	33112011	.	CTG	C	2222.15	PASS	AB=0.755;AC=18;AF=0.321;AN=56;BaseQRankSum=5.764;DP=480;FS=15.713;HRun=0;HaplotypeScore=203.2615;InbreedingCoeff=0.0433;MQ=42.54;MQ0=7;MQRankSum=-8.246;QD=9.96;ReadPosRankSum=-2.574;VQSLOD=1.5269;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:13,0:13:12.87:13,0,69	1/1:6,5:11:0.10:166,0,0	0/0:29,0:7:18.06:0,18,317	0/0:18,0:4:9.01:0,9,172	0/0:32,0:32:80.47:0,80,1480	0/0:27,0:27:75.23:0,75,1362	0/0:17,0:17:33.96:0,34,590	0/0:12,0:12:36.11:0,36,449	0/0:18,0:18:48.16:0,48,926	0/1:13,5:18:99:186,0,112	1/1:9,5:14:12.04:183,12,0	0/1:13,6:19:75.17:155,0,75	0/1:8,5:13:41.67:117,0,42	0/1:13,5:18:70.02:114,0,70	0/0:30,0:30:90.31:0,90,1713	0/1:12,8:20:71.49:115,0,71	0/0:20,0:19:42.53:0,43,738	0/0:29,0:29:59.92:0,60,1228	0/0:12,0:10:29.94:0,30,336	0/1:8,8:16:0.52:293,0,1	0/0:4,2:6:5.61:0,6,58	0/1:4,2:6:13.94:80,0,14	0/1:10,6:16:55.38:77,0,55	0/1:9,2:10:0.10:0,0,0	1/1:9,7:16:14.60:267,15,0	0/1:7,9:16:32.46:357,0,32	0/1:8,8:16:15.73:265,0,16	0/0:7,0:7:8.44:0,8,41
chr10	33112019	.	C	CT	2703.23	PASS	AB=0.649;AC=24;AF=0.429;AN=56;BaseQRankSum=9.789;DP=491;FS=14.215;HRun=1;HaplotypeScore=204.6845;InbreedingCoeff=-0.0589;MQ=42.48;MQ0=8;MQRankSum=-6.227;QD=9.19;ReadPosRankSum=-0.544;VQSLOD=-0.4042;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:9,6:15:42.93:65,0,43	0/1:2,5:11:9.65:80,0,10	0/0:25,0:4:12.04:0,12,150	0/0:17,0:4:8.96:0,9,112	0/0:22,1:35:51.88:0,52,789	0/0:11,0:25:18.76:0,19,434	0/0:15,0:18:27.19:0,27,344	0/0:15,0:15:13.32:0,13,477	0/0:7,0:19:6.71:0,7,268	0/1:7,10:18:31.38:453,0,31	0/0:0,8:13:8.15:0,8,54	0/1:2,12:19:21.40:184,0,21	1/1:1,11:16:3.25:222,3,0	1/1:1,11:17:0.06:166,0,0	0/0:29,0:30:87.26:0,87,1180	0/1:5,10:20:12.25:207,0,12	0/1:15,3:18:52.85:53,0,442	0/1:19,0:28:13.28:13,0,634	0/1:10,3:11:99:107,0,298	0/1:3,10:21:54.68:74,0,55	0/1:3,4:8:31.84:32,0,36	0/1:2,4:7:8.28:81,0,8	0/1:7,7:18:48.04:59,0,48	0/1:6,1:8:0.08:0,0,0	0/1:3,7:15:6.39:84,0,6	1/1:3,6:17:10.25:409,10,0	1/1:3,10:19:8.56:445,9,0	1/1:2,2:4:9.03:135,9,0
chr10	33112034	.	CT	C	4875.98	PASS	AB=0.581;AC=31;AF=0.554;AN=56;BaseQRankSum=9.365;DP=452;FS=3.981;HRun=1;HaplotypeScore=150.3479;InbreedingCoeff=0.4935;MQ=47.35;MQ0=5;MQRankSum=-5.201;QD=19.27;ReadPosRankSum=0.296;VQSLOD=4.9527;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:8,7:15:45.21:159,0,45	1/1:0,9:9:18.06:251,18,0	0/0:16,0:2:6.02:0,6,88	0/0:11,0:4:12.04:0,12,176	0/0:33,0:33:74.78:0,75,972	0/0:23,0:23:54.12:0,54,654	0/0:20,0:20:44.22:0,44,583	0/1:9,11:20:99:388,0,284	0/0:21,0:21:54.14:0,54,675	0/1:1,14:15:0.70:534,0,1	1/1:0,11:11:5.57:83,6,0	1/1:8,11:19:16.37:191,16,0	1/1:0,15:15:24.08:330,24,0	1/1:0,13:13:15.94:211,16,0	0/0:33,0:33:97.56:0,98,1483	1/1:1,15:16:24.55:336,25,0	0/0:16,0:15:18.08:0,18,460	0/0:26,0:26:43.05:0,43,707	0/1:6,7:12:99:255,0,191	1/1:1,17:18:18.06:251,18,0	0/1:1,9:10:30.95:146,0,31	1/1:0,9:9:18.06:251,18,0	0/1:1,11:12:33.90:99,0,34	1/1:4,7:10:12.02:168,12,0	1/1:0,14:14:21.07:293,21,0	0/1:1,11:12:4.05:385,0,4	1/1:6,10:16:30.50:375,31,0	1/1:1,4:5:12.04:167,12,0
chr10	33112035	.	T	TATC	5805.03	PASS	AB=0.971;AC=35;AF=0.625;AN=56;BaseQRankSum=10.036;DP=457;FS=1.487;HRun=0;HaplotypeScore=161.3947;InbreedingCoeff=0.0155;MQ=47.60;MQ0=5;MQRankSum=-2.128;QD=15.24;ReadPosRankSum=2.938;VQSLOD=4.7692;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:13,2:15:28.21:202,0,28	1/1:9,0:9:18.06:251,18,0	0/0:16,0:2:6.02:0,6,91	0/0:11,0:4:12.04:0,12,184	0/1:33,0:33:68.22:68,0,667	0/1:23,0:23:99:155,0,316	0/1:20,0:20:6.54:7,0,380	0/1:20,0:20:99:391,0,195	0/1:21,0:21:99:158,0,273	0/1:15,0:15:0.69:659,0,1	1/1:11,0:11:5.57:83,6,0	0/1:13,6:20:4.31:227,0,4	1/1:15,0:15:24.08:376,24,0	1/1:14,0:14:6.83:197,7,0	0/0:33,0:33:96.29:0,96,1480	1/1:16,0:16:14.38:323,14,0	0/0:16,0:15:16.04:0,16,449	0/1:26,0:26:78.41:78,0,421	0/1:13,0:12:74.26:284,0,74	1/1:18,0:18:18.06:252,18,0	0/1:10,0:10:16.26:134,0,16	1/1:9,0:9:18.06:251,18,0	0/1:12,0:12:18.08:139,0,18	1/1:12,0:11:11.64:167,12,0	1/1:14,0:14:21.07:293,21,0	0/1:14,0:14:9.08:420,0,9	1/1:10,6:16:30.10:521,30,0	1/1:5,0:5:12.04:168,12,0
chr10	33113365	.	C	CTTAG	35128.96	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-14.934;DP=730;FS=0.660;HRun=0;HaplotypeScore=100.4648;InbreedingCoeff=0.9978;MQ=76.32;MQ0=0;MQRankSum=-9.292;QD=66.28;ReadPosRankSum=2.482;VQSLOD=7.0326;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,28:31:75.21:1911,75,0	1/1:1,5:6:18.06:455,18,0	0/0:22,0:22:54.17:0,54,972	0/0:17,0:17:42.11:0,42,678	0/0:28,0:28:72.25:0,72,1344	0/0:30,0:30:78.27:0,78,1427	0/0:26,0:26:75.24:0,75,1355	1/1:10,24:36:99:2454,99,0	0/0:20,0:20:57.20:0,57,1052	1/1:3,26:29:87.30:2304,87,0	1/1:3,31:35:87.30:2290,87,0	1/1:3,27:32:87.29:2230,87,0	1/1:2,32:37:93.11:2477,93,0	1/1:2,23:26:66.23:1749,66,0	0/0:29,0:29:75.24:0,75,1369	1/1:7,34:42:99:2674,102,0	0/0:20,0:20:51.15:0,51,918	0/0:8,0:8:21.05:0,21,359	1/1:4,12:17:45.13:1116,45,0	1/1:2,28:31:90.31:2306,90,0	1/1:3,20:24:57.20:1520,57,0	1/1:4,19:24:54.19:1439,54,0	1/1:3,18:23:57.15:1460,57,0	1/1:4,18:24:48.16:1252,48,0	1/1:4,28:37:84.24:2179,84,0	1/1:3,30:35:99:2650,102,0	1/1:5,26:33:84.16:2024,84,0	1/1:0,8:8:24.08:640,24,0
chr10	33114644	.	T	TTAGA	659.05	PASS	AB=1.000;AC=10;AF=0.208;AN=48;BaseQRankSum=2.123;DP=377;FS=37.474;HRun=0;HaplotypeScore=78.3300;InbreedingCoeff=0.5666;MQ=76.17;MQ0=4;MQRankSum=-1.391;QD=8.45;ReadPosRankSum=-0.966;VQSLOD=0.4447;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,3:18:18.06:386,18,0	0/0:3,0:3:6.02:0,6,91	./.	./.	0/0:15,0:15:21.02:0,21,255	1/1:17,0:17:8.23:196,8,0	1/1:15,0:15:5.86:44,6,0	./.	1/1:4,5:10:6.02:139,6,0	0/0:17,0:17:9.03:0,9,136	0/0:7,0:7:12.04:0,12,182	0/0:6,0:6:3.01:0,3,46	0/0:20,0:20:27.07:0,27,386	0/0:10,0:10:18.06:0,18,273	0/0:18,0:18:18.06:0,18,273	0/0:10,0:10:9.03:0,9,137	0/1:11,0:10:1.77:2,0,245	0/0:5,0:5:2.99:0,3,24	./.	0/0:14,0:14:27.08:0,27,388	0/0:12,0:12:18.05:0,18,253	0/0:12,0:12:24.07:0,24,346	0/0:11,0:11:9.03:0,9,137	0/0:17,0:17:15.05:0,15,228	0/0:9,0:9:15.05:0,15,226	0/0:24,0:24:36.12:0,36,546	0/0:14,0:14:21.05:0,21,297	0/1:7,0:7:31.92:32,0,122
chr10	33114796	.	TA	T	515.41	PASS	AC=24;AF=0.571;AN=42;BaseQRankSum=5.022;DP=132;FS=17.337;HRun=2;HaplotypeScore=20.2368;InbreedingCoeff=0.6634;MQ=96.95;MQ0=2;MQRankSum=-0.978;QD=14.73;ReadPosRankSum=-3.617;VQSLOD=0.6174;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,0:4:0.47:1,0,0	./.	0/0:10,0:7:5.83:0,6,68	0/0:20,0:10:10.58:0,11,117	0/0:5,0:5:12.04:0,12,175	0/0:13,0:13:35.15:0,35,495	0/0:4,0:4:6.02:0,6,85	1/1:5,0:3:6.01:65,6,0	0/0:11,0:11:32.14:0,32,451	1/1:1,2:3:6.01:64,6,0	./.	1/1:1,0:1:2.22:7,2,0	./.	./.	0/0:7,0:7:21.07:0,21,295	./.	0/0:10,0:10:29.13:0,29,396	0/0:9,0:9:27.09:0,27,397	./.	1/1:0,2:2:6.02:76,6,0	./.	1/1:2,0:2:6.01:63,6,0	1/1:0,3:3:9.03:115,9,0	1/1:0,1:1:3.01:38,3,0	1/1:0,3:3:3.01:38,3,0	1/1:0,1:1:3.01:38,3,0	1/1:1,5:6:12.04:153,12,0	1/1:3,0:3:2.68:11,3,0
chr10	33114797	.	A	ATATATATATA	775.76	PASS	AC=26;AF=0.591;AN=44;BaseQRankSum=5.173;DP=130;FS=17.337;HRun=0;HaplotypeScore=40.9968;InbreedingCoeff=0.6436;MQ=97.54;MQ0=2;MQRankSum=-1.124;QD=19.39;ReadPosRankSum=-3.373;VQSLOD=-0.7658;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,1:7:3.01:129,3,0	./.	0/0:10,0:7:11:0,11,96	0/0:20,0:10:8.26:0,8,72	0/0:5,0:5:12.04:0,12,312	0/0:11,0:12:36.12:0,36,1057	0/0:2,0:3:6.02:0,6,86	1/1:0,0:3:6.01:65,6,0	0/0:10,0:11:33.10:0,33,908	1/1:2,0:2:6.01:64,6,0	./.	1/1:0,0:1:3.01:32,3,0	1/1:0,0:3:3.01:129,3,0	./.	0/0:7,0:7:21.07:0,21,381	./.	0/0:9,0:10:30.10:0,30,824	0/0:9,0:9:27.09:0,27,768	./.	1/1:2,0:2:3.01:38,3,0	./.	1/1:2,0:2:6.01:63,6,0	1/1:3,0:3:9.03:114,9,0	1/1:1,0:1:3.01:38,3,0	1/1:3,0:3:3.01:38,3,0	1/1:1,0:1:3.01:38,3,0	1/1:5,0:6:12.04:153,12,0	1/1:0,0:3:3.01:36,3,0
chr10	33116164	.	T	TA	16279.21	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-15.740;DP=637;FS=7.431;HRun=3;HaplotypeScore=53.1299;InbreedingCoeff=0.9997;MQ=81.71;MQ0=0;MQRankSum=-1.221;QD=37.00;ReadPosRankSum=0.596;VQSLOD=5.1449;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,16:16:42.14:588,42,0	1/1:1,14:15:39.13:546,39,0	0/0:17,0:17:41.13:0,41,489	0/0:15,0:15:39.11:0,39,459	0/0:34,0:34:96.27:0,96,1128	0/0:33,0:33:90.26:0,90,1068	0/0:17,0:17:51.14:0,51,600	1/1:0,41:41:99:1614,123,0	0/0:15,0:15:42.10:0,42,480	1/1:2,20:22:60.04:776,60,0	1/1:0,29:29:87.20:1173,87,0	1/1:1,16:17:45.15:630,45,0	1/1:1,28:29:69.23:966,69,0	1/1:1,17:18:45.15:630,45,0	0/0:21,0:21:60.16:0,60,698	1/1:2,22:24:30.23:845,30,0	0/0:26,0:26:75.20:0,75,884	0/0:19,0:19:54.17:0,54,647	1/1:4,30:34:90.30:1256,90,0	1/1:0,32:32:90.26:1236,90,0	1/1:1,12:13:33.11:462,33,0	1/1:2,24:26:69.23:965,69,0	1/1:1,17:18:48.16:672,48,0	1/1:1,11:12:30.10:420,30,0	1/1:1,28:29:75.25:1049,75,0	1/1:0,28:28:84.23:1107,84,0	1/1:1,25:26:63.21:881,63,0	1/1:0,11:11:33.11:462,33,0
chr10	33116963	.	TA	T	12838.07	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=13.453;DP=627;FS=0.617;HRun=2;HaplotypeScore=62.7807;InbreedingCoeff=0.9981;MQ=93.97;MQ0=0;MQRankSum=-4.108;QD=37.43;ReadPosRankSum=3.105;VQSLOD=5.4778;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:63.20:0,63,923	1/1:0,7:7:21.07:272,21,0	0/0:25,0:25:75.21:0,75,1001	0/0:30,0:30:84.26:0,84,1172	0/0:28,0:28:84.28:0,84,1240	0/0:18,0:18:51.16:0,51,744	0/0:19,0:19:57.18:0,57,833	1/1:0,28:28:84.21:1032,84,0	0/0:19,0:19:57.17:0,57,816	1/1:0,36:36:99:1388,108,0	1/1:0,23:23:66.21:856,66,0	0/0:24,0:24:69.18:0,69,992	1/1:0,25:25:72.23:934,72,0	0/0:29,0:29:87.29:0,87,1285	0/0:17,0:17:51.16:0,51,744	1/1:0,22:22:66.21:853,66,0	0/0:15,0:15:45.15:0,45,674	0/0:11,0:11:27.06:0,27,364	1/1:0,10:10:30.09:377,30,0	1/1:1,39:40:99:1482,117,0	1/1:0,31:31:87.28:1129,87,0	1/1:0,18:18:48.16:623,48,0	0/0:18,0:18:54.18:0,54,807	0/0:10,0:10:30.10:0,30,449	1/1:0,43:43:99:1596,123,0	1/1:0,30:30:90.29:1168,90,0	1/1:1,23:24:69.22:894,69,0	1/1:0,6:6:18.06:233,18,0
chr10	33120247	.	T	TA	8457.14	PASS	AB=0.810;AC=30;AF=0.536;AN=56;BaseQRankSum=-4.643;DP=628;FS=3.785;HRun=9;HaplotypeScore=96.9401;InbreedingCoeff=0.8280;MQ=75.70;MQ0=0;MQRankSum=0.497;QD=22.86;ReadPosRankSum=0.634;VQSLOD=5.1840;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,0:15:36.93:184,37,0	1/1:1,6:7:18.05:199,18,0	0/1:15,0:16:1.29:1,0,116	0/0:9,0:9:0.66:0,1,44	0/0:38,0:38:99:0,105,898	0/0:18,0:18:50.99:0,51,443	0/0:21,1:22:26.80:0,27,462	1/1:9,16:25:25.04:478,25,0	0/0:26,0:26:62.94:0,63,542	1/1:3,19:22:54.15:597,54,0	1/1:2,21:23:37.11:638,37,0	0/0:17,0:17:27.56:0,28,370	1/1:1,31:32:75.20:830,75,0	0/0:16,0:16:41.97:0,42,361	0/0:27,0:27:56.49:0,56,649	1/1:6,32:38:67.20:970,67,0	0/0:20,0:20:56.96:0,57,490	0/0:17,0:17:44.95:0,45,384	1/1:6,16:22:48.10:520,48,0	1/1:7,26:33:3.05:718,3,0	0/1:7,11:18:36.05:323,0,36	1/1:4,16:20:42.11:464,42,0	0/0:20,1:21:26.77:0,27,453	0/0:27,0:27:74.97:0,75,646	1/1:6,21:28:24.92:486,25,0	1/1:4,22:26:66.16:721,66,0	1/1:2,35:35:96.26:1062,96,0	1/1:0,8:8:24.06:265,24,0
chr10	33122081	.	G	GA	4783.19	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-14.238;DP=743;FS=1.558;HRun=7;HaplotypeScore=66.6287;InbreedingCoeff=0.9962;MQ=76.13;MQ0=0;MQRankSum=-2.623;QD=29.89;ReadPosRankSum=1.411;VQSLOD=5.3991;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:66.08:0,66,630	0/0:10,0:10:30.05:0,30,290	0/0:17,0:17:41.87:0,42,382	0/0:15,0:15:23.21:0,23,245	1/1:3,33:36:96.29:1155,96,0	1/1:5,29:34:78.24:942,78,0	1/1:6,16:22:42.13:507,42,0	0/0:32,0:32:71.97:0,72,671	1/1:1,20:21:60.14:709,60,0	0/0:31,0:31:87.14:0,87,840	0/0:28,0:28:78.12:0,78,753	0/0:24,0:24:69.10:0,69,661	0/0:30,0:30:81.12:0,81,782	0/0:27,0:27:78.12:0,78,753	0/0:31,0:31:81.13:0,81,782	0/0:25,0:25:69.11:0,69,666	1/1:3,25:28:69.19:818,69,0	1/1:0,19:19:54.17:652,54,0	0/0:26,0:26:72.11:0,72,694	0/0:46,0:46:99:0,126,1216	0/0:29,0:29:78.09:0,78,745	0/0:24,0:24:66.09:0,66,632	0/0:30,0:30:87.13:0,87,836	0/0:23,0:23:69.03:0,69,644	0/0:28,0:28:81.13:0,81,782	0/0:39,0:39:99:0,111,1068	0/0:34,0:33:93.09:0,93,886	0/0:5,0:5:15.02:0,15,145
chr10	33122714	.	TC	T	9106.86	PASS	AB=0.730;AC=42;AF=0.750;AN=56;BaseQRankSum=-1.165;DP=561;FS=2.731;HRun=10;HaplotypeScore=64.2744;InbreedingCoeff=0.7330;MQ=80.09;MQ0=0;MQRankSum=-3.359;QD=20.84;ReadPosRankSum=2.886;VQSLOD=5.9686;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,29:32:83.98:729,84,0	1/1:1,2:3:9:78,9,0	0/0:23,0:22:43.91:0,44,428	0/0:21,0:18:1.84:0,2,206	1/1:3,22:25:68.98:599,69,0	1/1:3,23:26:32.81:514,33,0	1/1:3,19:22:56.98:495,57,0	1/1:9,22:32:65:553,65,0	1/1:2,14:16:41.99:363,42,0	1/1:5,15:21:47.01:396,47,0	1/1:8,10:18:38.98:338,39,0	0/1:2,1:8:12.23:12,0,53	1/1:1,24:25:68.98:599,69,0	0/0:8,0:23:32.06:0,32,235	0/0:31,3:34:38.18:0,38,869	1/1:2,28:31:80.02:683,80,0	1/1:4,17:21:14.80:357,15,0	1/1:2,11:14:32.02:266,32,0	1/1:5,12:17:35.99:312,36,0	1/1:4,19:23:53.97:468,54,0	1/1:2,9:12:26.03:214,26,0	1/1:1,15:16:47.99:415,48,0	0/0:4,0:7:3.03:0,3,43	0/0:5,0:16:24.27:0,24,180	1/1:4,20:24:65.97:572,66,0	1/1:2,11:13:35.89:302,36,0	1/1:2,27:30:79.93:683,80,0	0/1:2,6:8:9.18:158,0,9
chr10	33123520	.	A	AT	513.57	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-1.904;DP=678;FS=10.798;HRun=6;HaplotypeScore=74.3416;InbreedingCoeff=0.9961;MQ=67.72;MQ0=0;MQRankSum=-1.412;QD=25.68;ReadPosRankSum=0.343;VQSLOD=3.3085;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,18:20:51.10:608,51,0	0/0:10,0:10:30.07:0,30,306	0/0:15,0:15:27.05:0,27,271	0/0:13,0:13:28.38:0,28,212	0/0:33,0:33:87.17:0,87,880	0/0:23,0:23:57.11:0,57,574	0/0:18,0:18:42.07:0,42,422	0/0:40,0:40:99:0,105,1040	0/0:31,0:31:87.20:0,87,887	0/0:35,0:35:99:0,102,1036	0/0:23,0:23:60.13:0,60,612	0/0:21,0:21:57.13:0,57,582	0/0:33,0:33:78.17:0,78,795	0/0:31,0:31:90.19:0,90,911	0/0:27,0:27:75.17:0,75,765	0/0:31,0:31:84.18:0,84,855	0/0:27,0:27:78.17:0,78,795	0/0:21,0:21:57.13:0,57,580	0/0:21,0:21:57.12:0,57,576	0/0:29,0:29:78.17:0,78,795	0/0:11,0:11:30.07:0,30,306	0/0:16,0:16:45.10:0,45,459	0/0:10,0:10:27.06:0,27,275	0/0:23,0:23:57.12:0,57,581	0/0:34,0:34:99:0,99,1009	0/0:34,0:34:99:0,99,1005	0/0:30,0:30:87.20:0,87,887	0/0:18,0:18:45.10:0,45,457
chr10	33123855	.	GGT	G	373.85	PASS	AB=0.892;AC=16;AF=0.421;AN=38;BaseQRankSum=-0.750;DP=433;FS=1.356;HRun=0;HaplotypeScore=91.7631;InbreedingCoeff=0.2832;MQ=56.41;MQ0=11;MQRankSum=-3.444;QD=2.61;ReadPosRankSum=3.876;VQSLOD=1.8442;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:23:12.02:0,12,156	0/1:5,2:7:29.42:55,0,29	./.	./.	0/0:27,0:28:6.01:0,6,67	0/0:23,0:22:9:0,9,90	0/0:18,0:19:0.47:0,0,1	./.	./.	./.	1/1:12,2:14:3:31,3,0	1/1:10,0:10:3.01:31,3,0	./.	./.	0/0:11,0:11:9.01:0,9,93	./.	0/0:18,0:19:17.92:0,18,149	0/0:13,0:13:2.98:0,3,21	./.	0/1:19,2:21:23.61:72,0,24	0/0:14,0:13:3.01:0,3,37	0/1:12,1:13:0:0,0,0	0/0:8,2:10:3.01:0,3,36	0/1:18,1:19:31.85:32,0,36	1/1:13,1:13:3.01:32,3,0	1/1:19,0:18:2.99:24,3,0	1/1:10,4:14:15.04:160,15,0	1/1:12,0:11:6.02:64,6,0
chr10	33126708	.	A	AT	4829.84	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-12.053;DP=574;FS=4.713;HRun=2;HaplotypeScore=53.2475;InbreedingCoeff=0.9981;MQ=83.40;MQ0=0;MQRankSum=-3.105;QD=38.64;ReadPosRankSum=3.303;VQSLOD=5.4300;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:33.10:0,33,409	0/0:12,0:12:36.11:0,36,446	0/0:23,0:23:63.20:0,63,775	0/0:15,0:15:42.05:0,42,483	1/1:1,22:23:63.13:860,63,0	1/1:1,23:24:63.21:907,63,0	1/1:0,13:13:36.12:518,36,0	0/0:26,0:26:78.22:0,78,935	1/1:0,21:21:60.20:864,60,0	0/0:33,0:33:87.27:0,87,1077	0/0:24,0:24:72.23:0,72,893	0/0:20,0:20:57.15:0,57,682	0/0:24,0:24:72.18:0,72,852	0/0:27,0:27:81.24:0,81,990	0/0:16,0:16:48.13:0,48,570	0/0:21,0:21:63.19:0,63,769	1/1:1,27:28:75.25:1080,75,0	1/1:2,14:16:44.51:600,45,0	0/0:22,0:22:63.18:0,63,757	0/0:25,0:25:75.24:0,75,930	0/0:6,0:6:18.06:0,18,223	0/0:15,0:15:45.14:0,45,558	0/0:14,0:14:42.12:0,42,507	0/0:10,0:10:30.05:0,30,355	0/0:19,0:18:54.16:0,54,657	0/0:31,0:31:90.26:0,90,1088	0/0:42,0:41:99:0,111,1362	0/0:12,0:12:36.07:0,36,429
chr10	33127338	.	GTTTAC	G	5369.63	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=12.922;DP=701;FS=11.036;HRun=0;HaplotypeScore=127.5363;InbreedingCoeff=0.9817;MQ=89.26;MQ0=0;MQRankSum=-4.446;QD=44.38;ReadPosRankSum=3.801;VQSLOD=4.3746;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:75.26:0,75,2349	0/0:5,0:5:15.05:0,15,470	0/0:31,0:31:78.27:0,78,2310	0/0:33,0:33:90.30:0,90,2655	1/1:1,25:26:48.16:1023,48,0	1/1:0,35:35:69.24:1470,69,0	1/1:3,16:19:30.10:639,30,0	0/0:27,0:27:78.26:0,78,2352	1/1:0,22:22:60.21:1279,60,0	0/0:31,0:31:84.29:0,84,2595	0/0:30,0:29:78.27:0,78,2376	0/0:31,0:31:90.31:0,90,2814	0/0:30,0:30:90.31:0,90,2776	0/0:31,0:31:90.31:0,90,2680	0/0:34,0:34:99:0,102,3116	0/0:18,0:18:48.16:0,48,1501	1/1:1,12:13:30.10:639,30,0	1/1:0,6:6:15.05:320,15,0	0/0:23,0:23:69.24:0,69,2122	0/0:23,0:23:66.23:0,66,2057	0/0:32,0:32:93.32:0,93,2855	0/0:19,0:19:54.17:0,54,1596	0/0:23,0:23:66.23:0,66,2047	0/0:26,0:26:72.23:0,72,2180	0/0:33,0:33:96.33:0,96,3008	0/0:23,0:23:69.24:0,69,2147	0/0:49,0:49:99:0,141,4350	0/0:3,0:3:9.03:0,9,282
chr10	33128155	.	AT	A	995.81	PASS	AB=0.929;AC=9;AF=0.161;AN=56;BaseQRankSum=4.986;DP=476;FS=4.792;HRun=9;HaplotypeScore=52.9351;InbreedingCoeff=0.9080;MQ=71.35;MQ0=2;MQRankSum=1.711;QD=14.64;ReadPosRankSum=1.971;VQSLOD=3.5840;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:39.12:0,39,450	0/0:11,0:11:33.09:0,33,372	0/0:13,0:13:20.64:0,21,205	0/0:9,0:8:15.04:0,15,168	0/0:25,0:25:75.22:0,75,865	0/0:17,0:17:45.12:0,45,508	0/1:12,1:13:0.39:0,0,250	0/0:41,0:40:99:0,99,1128	0/0:15,0:15:42.12:0,42,485	0/0:20,0:21:63:0,63,695	0/0:19,0:19:54.15:0,54,615	1/1:3,15:18:42.01:384,42,0	0/0:17,0:17:45.12:0,45,511	1/1:2,10:12:30.01:275,30,0	0/0:19,0:19:51.14:0,51,580	0/0:19,0:19:54.15:0,54,614	0/0:7,0:7:15.04:0,15,173	0/0:17,0:17:45.59:0,46,509	0/0:6,0:6:15.04:0,15,173	0/0:24,0:24:60.18:0,60,692	0/0:9,0:8:18.04:0,18,198	0/0:15,0:15:36.11:0,36,416	1/1:3,14:17:39.02:357,39,0	1/1:1,7:8:15.01:137,15,0	0/0:30,0:30:84.25:0,84,970	0/0:17,0:17:42.12:0,42,484	0/0:25,0:25:69.20:0,69,795	0/0:18,0:19:41.29:0,41,413
chr10	33128945	.	T	TA	940.53	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-2.198;DP=648;FS=2.380;HRun=7;HaplotypeScore=73.7801;InbreedingCoeff=0.9969;MQ=79.53;MQ0=0;MQRankSum=-4.394;QD=26.87;ReadPosRankSum=1.137;VQSLOD=4.4551;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,30:35:87.23:1035,87,0	0/0:9,0:9:24.04:0,24,232	0/0:20,0:20:41.24:0,41,426	0/0:19,0:19:44.34:0,44,407	0/0:39,0:39:99:0,102,985	0/0:26,0:26:69.11:0,69,666	0/0:16,0:16:42.07:0,42,406	0/0:29,0:29:75.09:0,75,713	0/0:18,0:18:47.96:0,48,463	0/0:31,0:31:78.10:0,78,753	0/0:29,0:29:84.14:0,84,811	0/0:17,0:17:42.06:0,42,405	0/0:33,0:33:84.13:0,84,811	0/0:27,0:27:75.09:0,75,713	0/0:26,0:26:66.10:0,66,637	0/0:19,0:19:54.09:0,54,522	0/0:24,0:24:63.06:0,63,596	0/0:10,0:10:30.05:0,30,290	0/0:13,0:13:36.03:0,36,339	0/0:32,0:32:84.11:0,84,805	0/0:19,0:19:54.09:0,54,522	0/0:22,0:22:66.11:0,66,637	0/0:26,0:26:66.10:0,66,637	0/0:11,0:11:33.05:0,33,319	0/0:25,0:25:72.09:0,72,684	0/0:26,0:26:72.10:0,72,695	0/0:31,0:31:84.10:0,84,800	0/0:16,0:16:48.08:0,48,463
chr10	33129415	.	CTG	C	1930.62	PASS	AB=0.998;AC=23;AF=0.411;AN=56;BaseQRankSum=11.487;DP=687;FS=0.384;HRun=0;HaplotypeScore=165.8589;InbreedingCoeff=-0.4294;MQ=54.01;MQ0=10;MQRankSum=-1.277;QD=3.86;ReadPosRankSum=6.943;VQSLOD=2.3911;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:33:52.75:126,0,53	1/1:11,0:11:11.30:56,11,0	0/0:34,0:4:8.96:0,9,105	0/0:34,0:4:5.79:0,6,52	0/1:25,0:25:22.73:62,0,23	0/1:21,0:20:56.78:88,0,57	0/1:19,0:17:42.46:42,0,68	0/1:29,0:29:99:162,0,215	0/1:22,0:22:17.56:105,0,18	0/1:30,0:30:56.57:253,0,57	0/1:18,0:18:31.90:32,0,82	0/0:23,0:22:40.74:0,41,371	0/1:31,0:31:67.22:149,0,67	0/0:35,1:36:30.05:0,30,508	0/0:20,0:20:54:0,54,756	0/1:20,0:20:33.73:102,0,34	0/1:31,0:31:45.79:46,0,54	0/1:21,0:21:53.93:79,0,54	0/1:22,0:20:90.32:121,0,90	0/1:24,0:24:10.29:10,0,68	0/1:27,0:27:29.55:30,0,57	0/1:26,0:26:27.86:50,0,28	0/0:15,0:14:30.40:0,30,291	0/0:25,0:25:24.03:0,24,252	0/1:28,0:28:80.85:104,0,81	0/1:30,1:31:33.23:279,0,33	1/1:18,2:19:8.92:178,9,0	0/1:11,0:11:23.17:23,0,136
chr10	33129417	.	GTC	G	7226.79	PASS	AB=0.942;AC=44;AF=0.786;AN=56;BaseQRankSum=0.177;DP=681;FS=0.569;HRun=0;HaplotypeScore=149.0649;InbreedingCoeff=0.5192;MQ=52.96;MQ0=11;MQRankSum=-2.114;QD=12.77;ReadPosRankSum=-2.250;VQSLOD=4.0656;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,14:33:36.20:388,36,0	1/1:1,10:11:12.04:147,12,0	0/0:34,0:3:6.02:0,6,91	0/0:35,0:4:2.82:0,3,15	1/1:20,4:25:20.86:258,21,0	1/1:16,5:20:32.02:388,32,0	0/1:14,6:18:3.31:187,0,3	1/1:11,17:28:48:532,48,0	1/1:17,6:23:41.34:457,41,0	1/1:2,28:30:72.01:780,72,0	1/1:4,12:16:12.04:148,12,0	0/1:22,0:21:11.27:11,0,48	1/1:6,25:31:42.13:512,42,0	0/1:35,0:35:4.90:5,0,101	0/0:20,0:20:45.11:0,45,635	1/1:4,14:19:30.09:365,30,0	1/1:28,3:31:32.18:289,32,0	1/1:19,1:20:17.95:317,18,0	1/1:9,13:20:39.11:463,39,0	1/1:3,22:25:5.74:74,6,0	1/1:4,23:27:9.02:111,9,0	1/1:2,24:26:15.05:185,15,0	0/1:15,0:14:42.70:46,0,43	0/0:26,0:26:16.93:0,17,85	1/1:6,20:26:27.08:333,27,0	1/1:5,24:29:74.92:824,75,0	1/1:4,16:20:26.77:295,27,0	1/1:6,5:11:9.03:111,9,0
chr10	33129436	.	T	TGC	955.75	PASS	AB=0.819;AC=6;AF=0.111;AN=54;BaseQRankSum=-3.555;DP=690;FS=1.306;HRun=0;HaplotypeScore=184.6990;InbreedingCoeff=-0.1251;MQ=51.42;MQ0=12;MQRankSum=-0.024;QD=6.50;ReadPosRankSum=-1.627;VQSLOD=3.1630;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:31.09:0,31,233	0/0:14,0:14:10.73:0,11,46	0/0:25,0:2:6.02:0,6,91	./.	0/0:24,3:26:18.95:0,19,82	0/1:19,1:19:39.83:74,0,40	0/1:22,2:22:18.07:88,0,18	0/0:29,0:29:32.59:0,33,144	0/1:22,3:25:99:279,0,99	0/0:32,0:32:35.32:0,35,196	0/0:15,0:15:17.07:0,17,99	0/0:20,0:18:30.03:0,30,327	0/0:27,0:27:24.52:0,25,151	0/0:39,0:38:44.95:0,45,536	0/0:22,0:22:50.73:0,51,689	0/0:22,0:22:31.17:0,31,181	0/1:10,22:35:71.75:234,0,72	0/1:5,15:22:14.52:394,0,15	0/1:21,0:19:7.10:7,0,105	0/0:30,0:30:4.88:0,5,27	0/0:32,0:31:14.87:0,15,87	0/0:28,0:28:11.88:0,12,63	0/0:11,0:10:18.05:0,18,212	0/0:23,0:23:18.06:0,18,230	0/0:30,0:28:11.11:0,11,150	0/0:27,0:27:40.78:0,41,259	0/0:23,0:22:19.84:0,20,80	0/0:7,0:7:10.90:0,11,58
chr10	33133258	.	T	TCA	2287.56	PASS	AB=0.794;AC=36;AF=0.750;AN=48;BaseQRankSum=0.187;DP=433;FS=6.161;HRun=0;HaplotypeScore=187.7846;InbreedingCoeff=-0.3981;MQ=36.49;MQ0=8;MQRankSum=-0.994;QD=5.61;ReadPosRankSum=0.953;VQSLOD=2.3733;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:17,1:31:5.99:49,6,0	0/1:9,1:9:26.80:39,0,27	./.	./.	./.	1/1:13,0:13:3:25,3,0	1/1:11,0:11:3:26,3,0	1/1:21,0:19:6.43:30,6,0	1/1:12,0:20:11.59:86,12,0	0/1:14,2:16:31.19:92,0,31	1/1:3,5:8:5.83:89,6,0	0/1:22,7:29:44.47:215,0,44	0/1:25,6:31:58.27:331,0,58	0/1:15,4:19:77.23:77,0,81	1/1:9,8:17:16.87:219,17,0	0/1:12,4:16:2.43:122,0,2	1/1:5,0:9:5.74:38,6,0	./.	1/1:5,1:6:4.83:50,5,0	0/1:12,2:13:8.15:81,0,8	1/1:31,0:30:2.99:45,3,0	0/1:13,4:18:23.82:61,0,24	1/1:13,1:14:3.01:35,3,0	0/1:19,8:26:2.72:301,0,3	0/1:6,5:12:21.32:87,0,21	0/1:11,4:16:44.03:166,0,44	1/1:5,3:9:9.03:134,9,0	0/1:3,3:8:20.52:21,0,24
chr10	33134154	.	C	CT	11386.85	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-14.977;DP=497;FS=2.439;HRun=1;HaplotypeScore=39.5630;InbreedingCoeff=0.9810;MQ=69.14;MQ0=1;MQRankSum=-1.457;QD=41.26;ReadPosRankSum=0.436;VQSLOD=4.9160;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,17:17:48.16:719,48,0	1/1:0,4:4:12.04:180,12,0	0/0:11,0:11:31.83:0,32,355	0/0:3,0:2:6.02:0,6,78	0/0:30,0:30:90.29:0,90,1169	0/0:18,0:18:54.18:0,54,701	0/0:12,0:12:33.11:0,33,428	1/1:2,31:33:93.31:1387,93,0	0/0:17,0:17:51.17:0,51,662	1/1:2,21:23:66.21:962,66,0	1/1:0,15:15:42.14:630,42,0	0/0:20,0:20:60.19:0,60,778	1/1:0,12:12:36.12:539,36,0	0/0:13,0:13:33.11:0,33,427	0/0:21,0:21:63.20:0,63,818	1/1:0,19:19:54.18:809,54,0	0/0:31,0:31:90.26:0,90,1149	0/0:18,0:18:54.18:0,54,701	1/1:1,14:15:38.92:584,39,0	1/1:0,20:20:60.20:899,60,0	1/1:0,11:11:33.11:495,33,0	1/1:0,11:10:30.10:450,30,0	0/0:14,0:14:42.14:0,42,545	0/0:13,0:13:36.10:0,36,451	1/1:1,31:32:81.27:1214,81,0	1/1:1,23:24:69.23:1035,69,0	1/1:1,27:27:72.24:1079,72,0	1/1:0,12:12:27.09:405,27,0
chr10	33136338	.	G	GT	16289.22	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=22.745;DP=849;FS=0.524;HRun=1;HaplotypeScore=181.8738;InbreedingCoeff=1.0000;MQ=77.00;MQ0=1;MQRankSum=-6.381;QD=42.98;ReadPosRankSum=1.428;VQSLOD=4.3660;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:66,0:66:99:0,199,2707	1/1:1,12:13:36.12:575,36,0	0/0:31,0:31:90.28:0,90,1226	0/0:32,0:30:82.13:0,82,1105	0/0:20,0:20:60.17:0,60,818	0/0:29,0:29:87.26:0,87,1182	0/0:41,0:41:99:0,117,1615	1/1:5,22:27:78.22:1217,78,0	0/0:26,0:26:78.23:0,78,1055	1/1:2,29:31:87.29:1367,87,0	1/1:2,15:17:45.15:718,45,0	0/0:36,0:36:99:0,108,1510	1/1:0,31:31:90.31:1437,90,0	0/0:36,0:36:99:0,105,1467	0/0:36,0:36:99:0,108,1495	1/1:0,45:45:99:2154,135,0	0/0:27,0:27:81.27:0,81,1129	0/0:22,0:22:66.19:0,66,903	1/1:2,18:20:57.19:905,57,0	1/1:2,27:29:72.18:1120,72,0	1/1:0,40:40:99:1667,105,0	1/1:4,23:27:75.24:1161,75,0	0/0:27,0:27:78.24:0,78,1072	0/0:41,0:41:99:0,108,1509	1/1:0,22:22:51.17:815,51,0	1/1:7,24:31:84.07:1239,84,0	1/1:1,31:32:84.29:1341,84,0	1/1:2,12:14:36.12:575,36,0
chr10	33136430	.	GCA	G	14546.11	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=20.732;DP=807;FS=1.142;HRun=0;HaplotypeScore=170.7936;InbreedingCoeff=0.9993;MQ=79.21;MQ0=0;MQRankSum=-8.594;QD=39.85;ReadPosRankSum=0.578;VQSLOD=5.2812;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:61,0:61:99:0,181,3370	1/1:1,7:8:21.07:309,21,0	0/0:19,0:19:54.17:0,54,867	0/0:28,0:28:72.83:0,73,1344	0/0:20,0:20:60.21:0,60,1121	0/0:29,0:29:84.29:0,84,1573	0/0:33,0:33:93.32:0,93,1742	1/1:4,23:27:69.23:1016,69,0	0/0:37,0:37:99:0,111,2055	1/1:0,28:28:81.26:1171,81,0	1/1:1,12:13:27.09:397,27,0	0/0:39,0:39:99:0,114,2092	1/1:1,36:37:99:1589,108,0	0/0:40,0:40:99:0,120,2231	0/0:42,0:42:99:0,126,2286	1/1:2,30:32:93.31:1367,93,0	0/0:20,0:20:57.20:0,57,1066	0/0:18,0:17:51.17:0,51,946	1/1:1,15:16:45.15:663,45,0	1/1:3,26:29:75.25:1103,75,0	1/1:3,34:37:96.80:1414,97,0	1/1:0,32:32:84.28:1233,84,0	0/0:18,0:18:51.17:0,51,953	0/0:38,0:38:99:0,108,2013	1/1:2,20:22:57.19:839,57,0	1/1:2,39:41:99:1680,117,0	1/1:1,27:28:81.27:1191,81,0	1/1:2,13:15:39.13:574,39,0
chr10	33136705	.	AGGCGG	A	9921.23	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=7.567;DP=530;FS=4.812;HRun=0;HaplotypeScore=123.6581;InbreedingCoeff=0.9888;MQ=71.72;MQ0=0;MQRankSum=-10.120;QD=40.00;ReadPosRankSum=7.391;VQSLOD=4.1770;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:25:27.03:0,27,546	1/1:1,7:8:15.05:299,15,0	0/0:16,0:12:27.54:0,28,420	0/0:18,0:18:32.81:0,33,591	0/0:16,0:16:20.99:0,21,308	0/0:6,0:7:15:0,15,289	0/0:28,0:28:42.99:0,43,782	1/1:0,24:24:57.11:1007,57,0	0/0:19,0:20:47.12:0,47,725	1/1:1,15:16:35.29:586,35,0	1/1:5,9:14:17.96:296,18,0	0/0:23,0:23:47.85:0,48,476	1/1:3,17:20:41.91:893,42,0	0/0:25,0:26:38.43:0,38,445	0/0:29,0:29:53.92:0,54,840	1/1:1,26:27:60.17:1234,60,0	0/0:22,0:22:35.98:0,36,650	0/0:20,0:22:53.98:0,54,943	1/1:5,12:18:36.03:578,36,0	1/1:0,14:14:27.06:577,27,0	1/1:3,22:25:27.01:439,27,0	1/1:0,13:13:30.10:641,30,0	0/0:15,0:16:29.97:0,30,373	0/0:14,0:14:27.09:0,27,711	1/1:3,16:19:48.12:969,48,0	1/1:5,23:28:60.14:1124,60,0	1/1:0,17:17:48.16:1032,48,0	1/1:4,1:5:12.04:245,12,0
chr10	33136707	.	GC	G	3635.34	PASS	AB=1.000;AC=35;AF=0.625;AN=56;BaseQRankSum=11.129;DP=493;FS=12.158;HRun=1;HaplotypeScore=108.6469;InbreedingCoeff=0.5061;MQ=71.86;MQ0=0;MQRankSum=-10.100;QD=10.15;ReadPosRankSum=4.441;VQSLOD=0.4252;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:23.10:0,23,215	1/1:7,0:7:14.85:101,15,0	0/0:14,0:10:7.46:0,7,174	0/1:19,0:19:11.26:11,0,138	0/0:14,0:14:16.34:0,16,138	0/1:7,0:7:6.35:6,0,86	0/0:26,1:27:32.05:0,32,288	1/1:24,0:24:55.94:395,56,0	0/1:21,0:21:47.17:47,0,210	1/1:15,0:15:34.80:237,35,0	1/1:10,1:11:14.85:101,15,0	0/1:24,0:24:99:118,0,196	1/1:17,1:18:41.40:283,41,0	0/1:22,0:22:34.40:34,0,192	0/0:29,0:29:52.69:0,53,381	1/1:26,0:26:58.90:401,59,0	0/0:19,0:19:34.28:0,34,223	0/1:22,0:22:9.80:10,0,220	1/1:13,0:13:35.64:249,36,0	1/1:14,0:14:26.70:183,27,0	1/1:22,0:22:20.76:140,21,0	1/1:13,0:13:29.68:202,30,0	0/1:13,0:13:2.44:2,0,124	0/0:12,0:12:24.67:0,25,206	1/1:16,2:18:44.20:294,44,0	1/1:24,1:25:57.25:382,57,0	1/1:17,0:16:47.56:331,48,0	1/1:7,0:7:19.50:106,19,0
chr10	33136708	.	C	CG	1124.92	PASS	AB=0.818;AC=22;AF=0.393;AN=56;BaseQRankSum=-9.524;DP=506;FS=1.113;HRun=11;HaplotypeScore=126.2707;InbreedingCoeff=0.3007;MQ=69.82;MQ0=0;MQRankSum=8.570;QD=3.97;ReadPosRankSum=-6.977;VQSLOD=-0.7003;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:20,0:21:16.72:20,0,17	0/0:7,0:7:8.88:0,9,27	0/1:12,0:8:13.29:31,0,13	0/1:19,0:19:7.63:8,0,23	1/1:12,3:15:8.23:68,8,0	0/1:7,0:7:32.41:42,0,32	0/1:17,13:30:46.74:47,0,55	0/0:24,0:24:18.96:0,19,65	1/1:16,4:20:6.54:226,7,0	0/0:15,0:15:7.60:0,8,31	0/0:11,0:11:8.87:0,9,27	1/1:21,1:22:20.87:134,21,0	0/0:18,0:18:30.87:0,31,94	1/1:19,1:23:7.32:37,7,0	0/1:15,18:35:3.06:187,0,3	0/0:26,0:26:41.82:0,42,128	0/1:7,12:20:16.62:143,0,17	1/1:13,8:22:5.77:245,6,0	0/0:13,0:13:5.09:0,5,28	0/0:14,0:14:19.79:0,20,61	0/0:22,0:22:11.09:0,11,34	0/0:13,0:13:22.02:0,22,67	1/1:12,1:13:8.01:51,8,0	0/1:7,2:16:48.95:53,0,49	0/0:18,0:18:23.80:0,24,80	0/0:24,1:25:30.88:0,31,94	0/0:17,0:16:29.45:0,29,96	1/1:8,0:8:2.66:14,3,0
chr10	33136716	.	GGGGT	G	214.12	PASS	AB=0.973;AC=12;AF=0.214;AN=56;BaseQRankSum=15.176;DP=515;FS=17.991;HRun=0;HaplotypeScore=141.7414;InbreedingCoeff=-0.1462;MQ=66.26;MQ0=0;MQRankSum=-13.313;QD=1.13;ReadPosRankSum=11.378;VQSLOD=0.0185;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:50.44:0,50,739	0/1:8,0:8:3.48:3,0,55	0/0:12,0:8:14.71:0,15,312	0/0:17,0:17:27.48:0,27,566	0/0:11,0:11:20.93:0,21,332	0/0:8,0:8:24.06:0,24,459	0/0:33,0:33:64.01:0,64,1141	0/0:28,0:28:4.50:0,4,263	0/0:18,0:18:48.10:0,48,929	1/1:15,0:15:0.90:20,1,0	0/1:9,1:10:21.26:21,0,49	0/0:15,0:15:38.71:0,39,639	0/1:17,1:18:44.81:77,0,45	0/0:27,0:27:53.63:0,54,751	0/0:33,0:33:54.08:0,54,881	0/1:29,0:29:69.32:69,0,117	0/0:19,0:19:33.08:0,33,629	0/0:18,0:18:48.12:0,48,971	0/1:13,0:13:14.70:15,0,66	0/1:14,0:14:26.84:27,0,104	0/0:25,0:25:5.21:0,5,165	0/1:14,0:14:17.67:18,0,37	0/0:9,0:9:26.95:0,27,449	0/0:19,0:19:33.10:0,33,660	0/1:17,2:19:49.75:55,0,50	0/1:30,1:31:22.71:23,0,203	0/1:19,0:18:29.11:29,0,42	0/0:9,0:9:20.42:0,20,162
chr10	33136994	.	C	CTACCA	18677.95	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-1.862;DP=562;FS=26.320;HRun=0;HaplotypeScore=103.3194;InbreedingCoeff=0.9892;MQ=82.58;MQ0=0;MQRankSum=-13.189;QD=65.31;ReadPosRankSum=-1.650;VQSLOD=2.8137;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:48.16:0,48,994	1/1:1,11:12:30.03:845,30,0	0/0:28,0:28:71.45:0,71,1388	0/0:15,0:14:24.08:0,24,492	0/0:18,0:18:48.15:0,48,956	0/0:22,0:22:57.20:0,57,1181	0/0:19,0:19:51.15:0,51,969	1/1:12,29:44:99:3047,123,0	0/0:26,0:26:69.24:0,69,1426	1/1:6,10:17:42.10:1137,42,0	1/1:4,7:11:18.06:551,18,0	0/0:20,0:20:54.13:0,54,970	1/1:5,18:24:60.20:1680,60,0	0/0:18,0:18:54.18:0,54,1077	0/0:32,0:32:96.27:0,96,1841	1/1:2,18:21:45.15:1378,45,0	0/0:19,0:19:57.19:0,57,1125	0/0:19,0:19:42.14:0,42,859	1/1:7,14:23:63.19:1632,63,0	1/1:3,23:27:54.19:1656,54,0	1/1:6,14:23:33.11:1011,33,0	1/1:2,3:7:9.03:275,9,0	0/0:10,0:10:24.08:0,24,497	0/0:12,0:12:36.08:0,36,669	1/1:0,16:17:39.07:1117,39,0	1/1:2,18:21:63.12:1635,63,0	1/1:3,22:29:72.25:2163,72,0	1/1:2,7:10:18.06:552,18,0
chr10	33137442	.	GA	G	6357.91	PASS	AC=28;AF=0.538;AN=52;BaseQRankSum=5.826;DP=566;FS=1.548;HRun=7;HaplotypeScore=66.4574;InbreedingCoeff=0.9957;MQ=46.89;MQ0=39;MQRankSum=0.047;QD=24.27;ReadPosRankSum=-2.014;VQSLOD=4.3378;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:38:99:0,99,1244	1/1:0,11:11:20.85:214,21,0	./.	./.	0/0:30,0:30:69.22:0,69,868	0/0:24,0:21:54.14:0,54,662	0/0:14,0:14:39.12:0,39,491	1/1:4,32:27:72.15:729,72,0	0/0:19,0:17:42.13:0,42,527	1/1:2,24:26:66.14:673,66,0	1/1:1,16:17:39.09:397,39,0	0/0:22,0:21:57.18:0,57,717	1/1:2,16:18:48.11:490,48,0	0/0:16,0:13:33.11:0,33,415	0/0:28,0:26:63.20:0,63,792	1/1:1,17:18:42.09:428,42,0	0/0:22,0:22:57.18:0,57,717	0/0:21,0:21:45.14:0,45,564	1/1:2,14:15:39.09:398,39,0	1/1:0,18:18:48.11:490,48,0	1/1:0,8:7:15.03:153,15,0	1/1:2,27:29:72.16:734,72,0	0/0:25,0:25:66.18:0,66,813	0/0:22,0:21:48.15:0,48,604	1/1:0,20:20:51.01:520,51,0	1/1:4,19:22:54.12:551,54,0	1/1:2,13:15:39.09:398,39,0	1/1:0,7:6:18.04:184,18,0
chr10	33137677	.	AACACACACACACACACACACACAC	A	2168.46	PASS	AB=0.650;AC=11;AF=0.212;AN=52;BaseQRankSum=3.675;DP=497;FS=0.000;HRun=0;HaplotypeScore=242.1659;InbreedingCoeff=0.5321;MQ=31.67;MQ0=83;MQRankSum=-2.035;QD=26.13;ReadPosRankSum=1.508;VQSLOD=2.3612;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:35:18.06:0,18,1267	0/0:6,0:8:0.68:0,1,311	./.	./.	1/1:16,6:22:14.99:607,15,0	1/1:11,0:10:6.02:207,6,0	1/1:12,7:13:3.01:189,3,0	0/0:10,0:4:3.01:0,3,248	1/1:7,6:11:12.04:754,12,0	0/0:14,0:14:27.04:0,27,1836	0/0:7,0:11:3.75:0,4,602	0/0:8,0:16:7.19:0,7,124	0/0:21,0:24:18.38:0,18,1334	0/0:16,0:14:3.01:0,3,122	0/0:26,0:26:39.09:0,39,3351	0/0:15,0:18:12.04:0,12,1149	0/1:6,7:12:9.96:368,0,10	1/1:3,1:4:3.01:189,3,0	0/0:21,0:15:27:0,27,1069	0/0:17,0:16:9.03:0,9,948	0/0:24,0:19:14.72:0,15,1511	0/0:27,0:25:9.03:0,9,633	0/0:9,0:16:9.50:0,10,239	0/0:13,0:15:9.02:0,9,99	0/0:17,0:16:3.01:0,3,315	0/0:16,0:15:24.07:0,24,1965	0/0:18,0:16:8.09:0,8,451	0/0:7,0:6:15.05:0,15,1272
chr10	33138126	.	C	CGT	408.80	PASS	AB=0.924;AC=13;AF=0.722;AN=18;BaseQRankSum=0.343;DP=490;FS=2.634;HRun=0;HaplotypeScore=129.2869;MQ=68.64;MQ0=17;MQRankSum=1.079;QD=2.38;ReadPosRankSum=0.539;VQSLOD=2.7083;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:26:2:11,2,0	./.	./.	./.	./.	1/1:22,0:22:2.96:19,3,0	./.	./.	./.	./.	./.	0/1:14,2:16:11.92:150,0,12	./.	1/1:12,0:12:6.02:84,6,0	0/0:19,0:19:7.63:0,8,42	./.	0/1:23,0:23:2.32:13,0,2	1/1:18,0:18:8.69:49,9,0	1/1:22,0:21:2.80:7,3,0	./.	./.	./.	./.	0/1:26,3:29:11.48:163,0,11	./.	./.	./.	./.
chr10	33138135	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTC	G	6255.95	PASS	AB=0.933;AC=33;AF=0.611;AN=54;BaseQRankSum=2.435;DP=499;FS=8.152;HRun=0;HaplotypeScore=430.7532;InbreedingCoeff=0.5329;MQ=53.75;MQ0=42;MQRankSum=-4.658;QD=20.58;ReadPosRankSum=3.300;VQSLOD=1.8187;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:40:58.50:0,58,4572	1/1:8,0:8:12.04:290,12,0	0/0:22,0:18:24.06:0,24,569	0/0:26,0:18:26.24:0,26,650	1/1:11,0:10:2.84:14,3,0	1/1:23,0:21:10.27:130,10,0	0/1:17,0:14:0.72:114,0,1	0/1:20,0:17:99:296,0,147	1/1:16,0:15:8.59:196,9,0	1/1:10,14:19:35.86:403,36,0	1/1:5,0:5:3.01:45,3,0	0/0:19,0:18:45.15:0,45,3390	1/1:15,0:14:33.04:620,33,0	0/0:13,0:12:27.08:0,27,1337	0/0:19,0:19:44.43:0,44,3073	1/1:19,0:18:51.10:1074,51,0	0/1:24,0:24:99:249,0,281	0/1:21,0:18:99:192,0,210	1/1:2,15:16:13.69:400,14,0	0/1:4,4:6:10.36:44,0,10	1/1:16,0:12:9.02:117,9,0	./.	0/0:8,0:8:9.03:0,9,1539	0/0:39,0:37:53.38:0,53,7838	1/1:12,0:11:24:384,24,0	1/1:18,0:15:36.05:659,36,0	1/1:16,0:16:1.81:701,2,0	1/1:13,0:11:17.98:328,18,0
chr10	33138165	.	G	GCC	396.77	PASS	AB=0.966;AC=21;AF=0.420;AN=50;BaseQRankSum=8.138;DP=339;FS=19.027;HRun=0;HaplotypeScore=101.7337;InbreedingCoeff=0.3929;MQ=46.22;MQ0=46;MQRankSum=-6.644;QD=2.96;ReadPosRankSum=-2.409;VQSLOD=0.3218;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:40:42.22:0,42,793	1/1:3,0:3:1.55:4,2,0	0/0:3,0:2:6.02:0,6,82	0/0:13,0:6:12.04:0,12,162	0/1:13,0:12:0:0,0,0	0/1:10,0:8:5.23:19,0,5	1/1:11,0:8:6.83:49,7,0	0/0:6,0:3:11.77:0,12,118	0/1:7,1:6:22.11:34,0,22	1/1:21,0:14:1.80:5,2,0	1/1:2,0:2:3.01:37,3,0	0/0:17,0:16:42.02:0,42,471	0/1:7,0:7:0.32:19,0,0	0/0:16,0:14:30.29:0,30,396	0/0:16,0:15:32.79:0,33,440	0/1:12,0:11:6.68:33,0,7	0/1:12,2:14:32.22:124,0,32	1/1:14,1:12:16.97:182,17,0	0/0:15,0:15:3.18:0,3,9	./.	./.	./.	0/0:11,0:10:15.05:0,15,205	0/0:40,0:37:74.74:0,75,968	0/1:3,0:2:0:0,0,0	1/1:5,0:2:4.44:13,4,0	1/1:9,0:9:9.42:28,9,0	0/0:6,0:4:0.52:0,1,7
chr10	33138167	.	G	GCC	391.51	PASS	AB=0.870;AC=11;AF=0.250;AN=44;BaseQRankSum=4.297;DP=349;FS=0.936;HRun=0;HaplotypeScore=110.2050;InbreedingCoeff=0.1898;MQ=43.74;MQ0=45;MQRankSum=-5.182;QD=5.02;ReadPosRankSum=-2.116;VQSLOD=2.7687;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:41:43.87:0,44,778	./.	./.	0/0:11,0:4:6.02:0,6,82	./.	1/1:3,3:4:1.27:57,1,0	0/0:9,4:10:7.60:0,8,78	0/0:5,0:2:8.70:0,9,84	0/1:8,4:9:11.09:50,0,11	0/0:21,0:14:2.50:0,2,9	1/1:4,0:4:5.93:81,6,0	0/0:17,0:16:42.12:0,42,475	0/0:7,0:6:2.98:0,3,20	0/0:17,0:15:30.85:0,31,409	0/0:15,0:14:32.78:0,33,417	0/1:12,0:11:29.51:33,0,30	0/1:15,4:19:77.73:119,0,78	0/1:12,3:14:9.97:167,0,10	0/0:15,0:15:4.47:0,4,11	./.	./.	./.	0/0:12,0:11:15.05:0,15,222	0/0:42,0:39:77.93:0,78,993	0/1:3,0:2:0:0,0,0	1/1:5,0:2:0.94:2,1,0	0/0:9,0:9:4.67:0,5,34	0/0:5,0:4:4.66:0,5,14
chr10	33138170	.	T	TC	1042.67	PASS	AB=1.000;AC=17;AF=0.315;AN=54;BaseQRankSum=5.872;DP=396;FS=19.235;HRun=0;HaplotypeScore=122.8404;InbreedingCoeff=0.2415;MQ=43.13;MQ0=43;MQRankSum=-4.304;QD=8.15;ReadPosRankSum=-3.019;VQSLOD=1.5320;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:41:60.37:0,60,770	1/1:4,0:4:6.02:90,6,0	0/0:4,0:2:3.01:0,3,41	0/0:14,0:4:5.88:0,6,83	0/1:13,0:12:0:0,0,0	0/0:6,0:4:3.01:0,3,35	0/0:14,0:11:6:0,6,64	0/1:6,0:4:35.38:41,0,35	0/0:13,0:10:2.77:0,3,23	1/1:20,0:14:5.83:61,6,0	1/1:2,5:7:9.03:139,9,0	0/0:15,0:14:39.10:0,39,483	0/1:11,0:10:99:157,0,102	0/0:18,0:16:36.10:0,36,469	0/0:16,0:15:32.94:0,33,362	0/1:17,0:16:35.07:148,0,35	0/0:21,0:21:32.93:0,33,342	0/0:19,0:16:17.28:0,17,290	0/0:15,0:15:1.80:0,2,7	./.	1/1:12,0:8:2.74:83,3,0	0/0:7,0:5:0:0,0,0	0/0:12,0:11:18.06:0,18,247	0/0:43,0:40:84.13:0,84,1078	1/1:8,0:7:14.93:168,15,0	0/1:8,0:6:69.50:77,0,69	0/1:14,0:14:99:195,0,176	0/1:8,0:7:37.36:41,0,37
chr10	33138179	.	CTGTGTG	C	877.07	PASS	AB=1.000;AC=22;AF=0.440;AN=50;BaseQRankSum=0.833;DP=382;FS=8.864;HRun=0;HaplotypeScore=107.8656;InbreedingCoeff=0.4441;MQ=47.61;MQ0=40;MQRankSum=-2.719;QD=5.41;ReadPosRankSum=-2.963;VQSLOD=0.8233;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:40:56.95:0,57,973	./.	0/0:9,0:4:5.99:0,6,73	0/0:26,0:8:17.81:0,18,132	./.	1/1:6,0:4:9.02:125,9,0	1/1:9,0:7:9.03:134,9,0	0/1:9,0:8:10.20:10,0,21	1/1:8,0:7:9.01:123,9,0	0/1:18,0:14:1.40:2,0,1	1/1:9,0:9:1.82:5,2,0	0/0:14,0:13:32.04:0,32,398	1/1:7,0:6:2.87:15,3,0	0/0:20,0:18:45.09:0,45,632	0/0:14,0:13:14.14:0,14,323	0/1:12,0:11:14.97:15,0,18	1/1:19,0:19:11.05:208,11,0	1/1:14,0:13:8.75:346,9,0	0/1:15,0:15:7.17:42,0,7	./.	0/1:12,0:8:0:0,0,0	0/1:7,0:5:0:0,0,0	0/0:13,0:12:24.08:0,24,416	0/0:45,0:42:78.25:0,78,1574	0/1:7,0:6:0.03:0,0,0	0/1:9,0:7:0.92:1,0,22	0/0:8,0:8:0.89:0,1,2	0/0:7,0:6:2.83:0,3,16
chr10	33138357	.	C	CTTTGCTTT	1440.70	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-0.636;DP=484;FS=7.085;HRun=0;HaplotypeScore=125.6241;InbreedingCoeff=0.8402;MQ=71.65;MQ0=0;MQRankSum=-5.384;QD=75.83;ReadPosRankSum=-1.012;VQSLOD=3.5711;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,10:19:42.10:1535,42,0	0/0:2,0:2:6.02:0,6,161	0/0:7,0:7:12.03:0,12,253	0/0:18,0:18:37.22:0,37,935	0/0:20,0:20:57.17:0,57,1406	0/0:25,0:25:63.20:0,63,1568	0/0:9,0:9:21.06:0,21,495	0/0:40,0:40:99:0,99,2427	0/0:15,0:15:39.13:0,39,1034	0/0:18,0:18:45.15:0,45,1173	0/0:24,0:24:69.21:0,69,1739	0/0:12,0:12:27.09:0,27,723	0/0:20,0:20:54.15:0,54,1337	0/0:19,0:19:51.16:0,51,1310	0/0:17,0:17:45.14:0,45,1109	0/0:20,0:20:45.14:0,45,1148	0/0:12,0:12:33.11:0,33,880	0/0:12,0:12:33.08:0,33,814	0/0:24,0:24:72.22:0,72,1695	0/0:17,0:17:42.14:0,42,1094	0/0:4,0:4:12.04:0,12,321	0/0:5,0:5:15.04:0,15,347	0/0:16,0:16:45.14:0,45,1136	0/0:11,0:11:30.10:0,30,784	0/0:23,0:23:60.19:0,60,1550	0/0:35,0:35:87.30:0,87,2272	0/0:30,0:30:84.24:0,84,2038	0/0:10,0:10:30.10:0,30,795
chr10	33139145	.	CT	C	11052.43	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=21.567;DP=763;FS=1.514;HRun=1;HaplotypeScore=122.6647;InbreedingCoeff=0.9974;MQ=87.52;MQ0=0;MQRankSum=-1.858;QD=31.85;ReadPosRankSum=2.897;VQSLOD=4.6920;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,1:49:99:0,144,2151	1/1:0,10:10:27.08:324,27,0	0/0:26,0:26:78.23:0,78,1137	0/0:33,0:33:80.79:0,81,1176	0/0:34,0:34:99:0,99,1505	0/0:37,0:37:99:0,111,1659	0/0:23,0:23:69.22:0,69,1054	1/1:4,21:25:63.18:746,63,0	0/0:31,0:31:93.21:0,93,1413	1/1:2,28:30:84.23:987,84,0	1/1:0,23:23:63.19:756,63,0	0/0:36,0:36:99:0,102,1574	1/1:2,32:34:84.26:1006,84,0	0/0:30,0:30:90.29:0,90,1380	0/0:37,0:37:99:0,105,1616	1/1:0,34:34:87.27:1043,87,0	0/0:29,0:29:87.26:0,87,1315	0/0:9,0:9:24.06:0,24,352	1/1:4,19:23:63.14:723,63,0	1/1:1,33:34:93.29:1116,93,0	1/1:4,33:37:99:1187,99,0	1/1:0,17:17:48.15:576,48,0	0/0:23,0:23:66.19:0,66,987	0/0:19,0:19:57.15:0,57,861	1/1:3,19:22:60.12:689,60,0	1/1:0,25:25:75.17:860,75,0	1/1:1,27:28:72.22:859,72,0	1/1:0,5:5:15.05:180,15,0
chr10	33140844	.	AT	A	2804.87	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=13.688;DP=617;FS=0.382;HRun=9;HaplotypeScore=64.5062;InbreedingCoeff=0.9829;MQ=75.92;MQ0=0;MQRankSum=-2.197;QD=21.58;ReadPosRankSum=4.361;VQSLOD=4.2566;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:42.12:0,42,485	0/0:9,0:9:27.08:0,27,312	0/0:13,0:13:32.98:0,33,345	0/0:13,0:13:28.46:0,28,238	1/1:1,27:28:81.04:741,81,0	1/1:2,24:26:66.03:604,66,0	1/1:3,14:17:39.02:357,39,0	0/0:45,0:45:99:0,111,1239	1/1:1,17:18:42.02:384,42,0	0/0:24,0:24:57.17:0,57,654	0/0:22,0:22:49.30:0,49,639	0/0:29,0:29:78.19:0,78,872	0/0:36,0:36:96.25:0,96,1087	0/0:23,0:23:54.16:0,54,617	0/0:28,0:28:81.22:0,81,916	0/0:25,1:26:50.77:0,51,838	1/1:3,16:19:45.02:412,45,0	1/1:1,21:22:54.02:494,54,0	0/0:13,1:14:8.64:0,9,353	0/0:23,0:23:66.20:0,66,762	0/0:9,0:9:21.06:0,21,242	0/0:26,0:26:78.23:0,78,897	0/0:23,0:23:66.20:0,66,762	0/0:17,0:17:45.13:0,45,519	0/0:30,0:30:75.21:0,75,857	0/0:33,0:33:93.28:0,93,1072	0/0:24,0:24:72.21:0,72,831	0/0:5,0:5:15.04:0,15,173
chr10	33142243	.	A	AT	376.28	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-4.103;DP=626;FS=5.510;HRun=7;HaplotypeScore=62.1009;InbreedingCoeff=0.9984;MQ=82.24;MQ0=0;MQRankSum=-1.875;QD=22.13;ReadPosRankSum=0.840;VQSLOD=3.3460;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,15:17:39.12:471,39,0	0/0:14,0:14:33.05:0,33,319	0/0:15,0:15:36.05:0,36,347	0/0:20,1:21:37.70:0,38,369	0/0:24,0:24:63.09:0,63,608	0/0:36,0:36:99:0,105,1000	0/0:27,0:27:75.03:0,75,702	0/0:35,0:35:84.06:0,84,790	0/0:23,0:23:63.10:0,63,608	0/0:21,0:21:60.09:0,60,576	0/0:21,0:21:51.07:0,51,488	0/0:19,0:19:51.06:0,51,487	0/0:29,0:29:78.10:0,78,747	0/0:20,0:20:51.08:0,51,492	0/0:31,0:31:84.13:0,84,811	0/0:23,0:23:51.07:0,51,493	0/0:23,0:23:62.13:0,62,586	0/0:23,0:23:57.08:0,57,550	0/0:21,0:21:54.08:0,54,522	0/0:25,0:25:63.08:0,63,603	0/0:19,0:19:57.08:0,57,545	0/0:12,0:12:30.04:0,30,290	0/0:19,0:19:32.68:0,33,497	0/0:22,0:22:57.03:0,57,531	0/0:18,0:18:42.06:0,42,405	0/0:26,0:26:66.08:0,66,631	0/0:29,0:29:84.14:0,84,811	0/0:13,0:13:33.05:0,33,319
chr10	33146269	.	T	TTC	137.74	PASS	AB=0.949;AC=18;AF=0.500;AN=36;BaseQRankSum=-0.835;DP=224;FS=0.000;HRun=0;HaplotypeScore=54.5871;InbreedingCoeff=0.3421;MQ=49.74;MQ0=7;MQRankSum=1.971;QD=1.32;ReadPosRankSum=-0.301;VQSLOD=1.3526;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,0:6:0.47:1,0,0	./.	./.	0/0:24,0:12:2.42:0,2,22	./.	./.	0/1:10,0:10:0.01:0,0,0	1/1:15,0:15:7.76:31,8,0	0/0:9,0:8:5.74:0,6,30	./.	./.	0/0:13,0:10:2.62:0,3,12	1/1:9,0:9:0.46:2,0,0	0/1:14,0:14:0.06:0,0,0	0/1:5,4:9:2.89:126,0,3	0/1:7,0:7:0:0,0,0	0/1:3,0:3:0:0,0,0	1/1:5,0:5:1.36:3,1,0	0/0:5,0:4:1.25:0,1,3	./.	0/0:7,0:7:0:0,0,0	0/1:3,0:2:0:0,0,0	./.	1/1:9,0:9:5.94:43,6,0	./.	1/1:14,0:13:4.07:20,4,0	0/0:6,0:5:0:0,0,0	./.
chr10	33147603	.	G	GT	18822.98	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-3.031;DP=583;FS=2.881;HRun=5;HaplotypeScore=78.8407;InbreedingCoeff=0.9456;MQ=73.33;MQ0=0;MQRankSum=-7.934;QD=33.79;ReadPosRankSum=4.689;VQSLOD=5.0545;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,33:33:93.30:1224,93,0	1/1:3,6:9:15.05:197,15,0	0/0:14,0:14:32.99:0,33,325	0/0:12,0:12:29.09:0,29,285	1/1:0,28:28:81.26:1065,81,0	1/1:1,34:35:99:1341,102,0	1/1:1,20:21:54.18:711,54,0	1/1:3,25:28:75.24:987,75,0	1/1:1,14:15:39.13:513,39,0	1/1:8,26:34:93.29:1203,93,0	1/1:2,24:26:66.17:848,66,0	1/1:1,17:18:45.15:592,45,0	1/1:6,24:30:81.10:976,81,0	1/1:2,17:19:51.17:671,51,0	1/1:2,20:22:54.18:711,54,0	1/1:5,19:24:57.09:683,57,0	1/1:1,19:20:54.18:711,54,0	1/1:4,7:11:24.04:296,24,0	1/1:5,14:19:51.16:656,51,0	1/1:7,22:29:69.18:887,69,0	1/1:0,8:8:17.93:178,18,0	1/1:3,15:18:45.10:572,45,0	1/1:1,19:20:60.19:785,60,0	1/1:2,15:17:12.91:520,13,0	1/1:2,27:30:77.95:889,78,0	1/1:2,17:19:54.13:690,54,0	1/1:2,19:21:63.18:799,63,0	1/1:0,3:3:9.03:118,9,0
chr10	33147624	.	A	AT	10118.23	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=0.020;DP=612;FS=10.810;HRun=6;HaplotypeScore=110.2452;InbreedingCoeff=0.9888;MQ=74.16;MQ0=0;MQRankSum=-12.012;QD=32.02;ReadPosRankSum=-1.850;VQSLOD=2.9030;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:90.20:0,90,918	1/1:2,8:10:24.08:302,24,0	0/0:17,0:17:16.66:0,17,257	0/0:17,0:17:44.46:0,44,430	0/0:31,0:31:93.21:0,93,949	0/0:31,0:30:75.17:0,75,765	0/0:20,0:20:45.09:0,45,452	1/1:7,25:32:78.22:955,78,0	0/0:18,0:18:45.10:0,45,459	1/1:4,26:30:81.26:1017,81,0	1/1:3,19:22:57.18:714,57,0	0/0:20,0:20:57.12:0,57,576	1/1:6,25:31:78.24:967,78,0	0/0:19,0:19:51.11:0,51,520	0/0:27,0:27:75.09:0,75,730	1/1:1,26:27:75.24:943,75,0	0/0:19,0:19:51.09:0,51,511	1/1:3,10:13:24.08:302,24,0	1/1:1,16:17:48.14:587,48,0	1/1:3,22:26:69.19:850,69,0	1/1:4,5:9:18.06:226,18,0	1/1:4,12:16:39.12:490,39,0	0/0:25,0:25:72.16:0,72,733	0/0:17,0:17:48.10:0,48,489	1/1:3,34:37:99:1309,105,0	1/1:1,22:22:66.20:817,66,0	1/1:4,16:20:42.13:528,42,0	1/1:0,3:3:9.03:113,9,0
chr10	33148631	.	G	GCACA	19481.83	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-13.269;DP=869;FS=0.000;HRun=0;HaplotypeScore=148.9489;InbreedingCoeff=0.9968;MQ=58.67;MQ0=4;MQRankSum=-1.224;QD=39.92;ReadPosRankSum=1.835;VQSLOD=4.7958;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:28:51.16:0,51,838	1/1:2,11:13:33.11:821,33,0	0/0:35,0:18:17.04:0,17,272	0/0:33,0:12:18.02:0,18,270	0/0:39,0:39:94.77:0,95,1460	0/0:32,0:33:84.21:0,84,1321	0/0:15,0:16:27.08:0,27,429	1/1:18,15:37:56.71:1071,57,0	0/0:29,0:29:54.11:0,54,814	1/1:12,31:50:99:1986,106,0	1/1:6,27:31:34.12:1535,34,0	0/0:33,0:33:81.26:0,81,1333	1/1:9,30:39:53.65:1218,54,0	0/0:26,0:27:54.13:0,54,850	0/0:43,0:43:99:0,103,1547	1/1:10,21:37:68.23:1492,68,0	0/0:17,0:18:37.90:0,38,635	1/1:7,8:16:26.83:609,27,0	1/1:6,14:20:42.40:949,42,0	1/1:6,25:37:28.84:1485,29,0	1/1:8,12:24:29.57:622,30,0	1/1:16,32:50:77.41:1813,77,0	0/0:24,0:25:63.19:0,63,1008	0/0:22,0:22:60.19:0,60,981	1/1:4,22:27:59.67:1430,60,0	1/1:9,32:42:92.75:1875,93,0	1/1:6,34:45:83.49:1901,83,0	1/1:3,9:12:28.34:675,28,0
chr10	33149883	.	CT	C	8737.99	PASS	AB=0.581;AC=48;AF=0.857;AN=56;BaseQRankSum=7.853;DP=569;FS=34.912;HRun=2;HaplotypeScore=123.2111;InbreedingCoeff=-0.1514;MQ=89.13;MQ0=0;MQRankSum=0.035;QD=15.36;ReadPosRankSum=9.380;VQSLOD=2.2758;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,28:28:80.06:555,80,0	1/1:1,11:12:35.52:239,36,0	1/1:23,0:23:35.91:241,36,0	0/1:31,0:31:32.72:253,0,33	0/1:1,22:23:1.74:278,0,2	1/1:1,16:17:44.53:312,45,0	1/1:2,16:18:4.17:247,4,0	1/1:0,31:31:88.47:445,88,0	1/1:0,18:18:53.24:356,53,0	1/1:2,32:34:92.52:525,93,0	0/1:1,11:12:31.53:125,0,32	0/1:0,21:21:22.57:263,0,23	1/1:0,16:16:5.51:242,6,0	1/1:0,27:27:56.15:512,56,0	1/1:1,28:29:40.81:483,41,0	1/1:1,25:26:70.70:458,71,0	1/1:0,20:20:56.09:369,56,0	1/1:0,18:18:53.18:351,53,0	1/1:1,15:16:42.92:251,43,0	1/1:1,22:23:62.21:414,62,0	1/1:2,14:16:18.33:207,18,0	0/1:1,17:18:9.35:264,0,9	1/1:3,11:14:11.66:179,12,0	0/1:0,14:14:7.32:148,0,7	0/1:2,14:16:0.26:214,0,0	1/1:0,23:23:66.63:383,67,0	1/1:1,20:21:38.47:381,38,0	0/1:1,3:4:12.15:42,0,12
chr10	33153108	.	T	TG	5171.06	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-6.263;DP=734;FS=2.112;HRun=2;HaplotypeScore=103.2009;InbreedingCoeff=0.9999;MQ=85.76;MQ0=0;MQRankSum=-3.929;QD=41.37;ReadPosRankSum=1.395;VQSLOD=4.3602;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,120,1558	0/0:13,0:13:39.13:0,39,504	0/0:28,1:29:38.51:0,39,913	0/0:27,0:27:60.99:0,61,875	1/1:1,12:13:33.11:495,33,0	1/1:0,23:23:63.21:944,63,0	1/1:0,31:31:81.27:1214,81,0	0/0:33,0:33:96.31:0,96,1235	1/1:0,23:23:69.23:1034,69,0	0/0:18,0:18:51.16:0,51,657	0/0:15,0:15:42.14:0,42,542	0/0:29,0:29:87.27:0,87,1113	0/0:34,0:34:96.31:0,96,1238	0/0:25,0:25:72.23:0,72,935	0/0:38,0:38:99:0,111,1441	0/0:34,1:35:57.36:0,57,1240	1/1:1,22:23:63.21:944,63,0	1/1:0,12:12:36.12:540,36,0	0/0:16,0:16:48.16:0,48,623	0/0:19,0:19:54.15:0,54,685	0/0:35,0:35:96.31:0,96,1243	0/0:28,0:28:84.26:0,84,1075	0/0:22,0:22:66.21:0,66,857	0/0:33,0:33:96.27:0,96,1227	0/0:28,0:28:84.27:0,84,1091	0/0:33,0:33:96.31:0,96,1244	0/0:38,0:38:99:0,111,1427	0/0:21,0:21:63.20:0,63,818
chr10	33153812	.	GT	G	1691.05	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=9.808;DP=616;FS=2.214;HRun=8;HaplotypeScore=57.7824;InbreedingCoeff=0.9888;MQ=76.08;MQ0=0;MQRankSum=0.469;QD=22.55;ReadPosRankSum=1.604;VQSLOD=4.1647;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:60.17:0,60,712	0/0:9,0:9:27.08:0,27,326	0/0:18,1:19:23.11:0,23,397	0/0:6,0:6:15.03:0,15,159	0/0:45,0:45:99:0,120,1426	0/0:28,0:28:78.21:0,78,911	0/0:17,0:17:45.14:0,45,544	0/0:27,0:27:72.22:0,72,869	0/0:18,0:18:48.15:0,48,580	0/0:25,0:25:69.21:0,69,830	0/0:31,0:31:84.23:0,84,986	1/1:1,21:22:60.10:579,60,0	0/0:20,1:21:28.20:0,28,623	1/1:1,21:22:60.10:579,60,0	0/0:34,0:34:99:0,99,1163	0/0:18,0:18:51.16:0,51,616	0/0:20,0:20:60.14:0,60,697	0/0:24,0:24:66.13:0,66,766	0/0:23,0:23:57.17:0,57,689	0/0:38,0:38:99:0,108,1294	0/0:5,0:5:15.03:0,15,170	0/0:19,0:19:51.16:0,51,616	1/1:5,17:22:51.07:490,51,0	1/1:0,9:9:21.03:203,21,0	0/0:24,0:24:66.19:0,66,785	0/0:22,0:22:60.18:0,60,725	0/0:34,0:33:99:0,102,1201	0/0:13,0:13:39.08:0,39,445
chr10	33154238	.	AG	A	8734.67	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=16.920;DP=597;FS=3.358;HRun=2;HaplotypeScore=153.0238;InbreedingCoeff=0.9945;MQ=78.48;MQ0=0;MQRankSum=-12.775;QD=20.95;ReadPosRankSum=1.400;VQSLOD=4.8937;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:96.33:0,96,1438	1/1:0,5:5:11.94:88,12,0	0/0:22,0:22:58.59:0,59,814	0/0:19,0:20:41.77:0,42,739	1/1:4,21:25:59.30:507,59,0	1/1:4,18:22:56.93:501,57,0	1/1:3,18:21:53.92:477,54,0	1/1:5,20:25:65.80:533,66,0	1/1:2,23:25:68.92:600,69,0	1/1:2,20:22:59.83:492,60,0	1/1:2,22:24:55.85:395,56,0	0/0:22,0:22:66.22:0,66,987	1/1:1,18:19:50.70:370,51,0	0/0:17,0:17:51.16:0,51,743	0/0:25,0:25:75.24:0,75,1102	1/1:3,22:25:71.64:535,72,0	1/1:3,34:37:92.95:825,93,0	1/1:0,14:14:38.93:325,39,0	1/1:0,11:11:32.89:270,33,0	1/1:2,22:24:55.81:382,56,0	1/1:2,9:11:26.87:204,27,0	1/1:3,17:20:56.72:432,57,0	0/0:22,0:22:66.22:0,66,989	0/0:19,0:19:57.18:0,57,830	1/1:3,19:22:50.81:408,51,0	1/1:3,22:25:71.77:565,72,0	1/1:3,23:26:71.25:550,71,0	1/1:1,13:14:35.87:277,36,0
chr10	33154241	.	AC	A	9741.61	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=17.533;DP=568;FS=2.840;HRun=1;HaplotypeScore=145.5446;InbreedingCoeff=0.9944;MQ=77.99;MQ0=0;MQRankSum=-13.357;QD=25.24;ReadPosRankSum=1.465;VQSLOD=4.8964;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,102,1595	1/1:0,5:5:11.99:100,12,0	0/0:20,0:20:51.29:0,51,859	0/0:21,0:21:50.24:0,50,749	1/1:1,21:22:59.74:566,60,0	1/1:1,18:19:54.05:530,54,0	1/1:0,18:18:54.05:531,54,0	1/1:1,20:21:63.01:568,63,0	1/1:0,23:23:69.08:668,69,0	1/1:1,21:22:63.03:593,63,0	1/1:0,22:22:56.68:470,57,0	0/0:22,0:22:66.23:0,66,1053	1/1:0,19:19:53.95:462,54,0	0/0:18,0:18:54.17:0,54,838	0/0:24,0:24:72.25:0,72,1151	1/1:0,22:22:65.94:550,66,0	1/1:2,34:36:99:978,99,0	1/1:0,14:14:39.03:364,39,0	1/1:0,11:11:33:303,33,0	1/1:0,22:22:53.49:410,53,0	1/1:1,9:10:23.98:204,24,0	1/1:1,17:18:53.96:460,54,0	0/0:24,0:24:69.22:0,69,1077	0/0:19,0:19:57.19:0,57,908	1/1:1,19:20:50.99:458,51,0	1/1:1,22:23:68.99:606,69,0	1/1:1,23:24:68.74:595,69,0	1/1:2,13:15:38.95:326,39,0
chr10	33154255	.	G	GA	9264.95	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=4.196;DP=624;FS=2.224;HRun=6;HaplotypeScore=147.7363;InbreedingCoeff=0.9984;MQ=73.54;MQ0=0;MQRankSum=-13.724;QD=30.18;ReadPosRankSum=-1.767;VQSLOD=2.3812;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,102,1021	1/1:1,6:7:18.06:226,18,0	0/0:23,0:23:57.12:0,57,574	0/0:16,0:16:30:0,30,294	0/0:21,0:21:57.12:0,57,575	0/0:23,0:23:54.11:0,54,551	0/0:17,0:17:42.09:0,42,428	1/1:6,25:31:75.21:916,75,0	0/0:25,0:25:69.15:0,69,701	1/1:8,16:24:54.17:676,54,0	1/1:3,22:25:57.14:695,57,0	0/0:22,0:22:60.12:0,60,605	1/1:3,18:22:48.15:603,48,0	0/0:18,0:18:54.12:0,54,551	0/0:26,0:26:78.18:0,78,795	1/1:2,22:24:66.21:821,66,0	0/0:36,0:36:96.21:0,96,978	0/0:14,0:14:27.04:0,27,267	1/1:4,10:15:33.05:372,33,0	1/1:5,19:24:57.13:693,57,0	1/1:2,7:9:24.08:296,24,0	1/1:5,23:28:66.17:811,66,0	0/0:21,0:21:57.11:0,57,571	0/0:19,0:19:48.11:0,48,490	1/1:4,22:26:61.08:746,61,0	1/1:0,27:27:81.26:1017,81,0	1/1:3,22:25:57.18:713,57,0	1/1:0,20:20:54.17:679,54,0
chr10	33155453	.	TA	T	22894.32	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=4.984;DP=695;FS=2.208;HRun=2;HaplotypeScore=69.3522;InbreedingCoeff=0.9994;MQ=83.81;MQ0=0;MQRankSum=-8.083;QD=36.46;ReadPosRankSum=6.208;VQSLOD=5.0139;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:1,32:33:93.30:1207,93,0	1/1:0,11:11:30.10:389,30,0	0/0:19,0:19:57.16:0,57,788	0/0:21,0:21:63.16:0,63,896	1/1:2,34:36:96.19:1206,96,0	1/1:1,25:26:72.17:914,72,0	1/1:0,23:23:63.20:818,63,0	1/1:1,22:23:66.19:830,66,0	1/1:0,21:21:60.20:779,60,0	1/1:1,28:29:84.26:1078,84,0	1/1:0,26:26:72.19:916,72,0	1/1:0,33:33:96.31:1246,96,0	1/1:0,31:31:87.28:1129,87,0	1/1:2,36:38:99:1402,108,0	0/0:27,0:27:81.26:0,81,1177	1/1:0,30:30:84.27:1091,84,0	1/1:0,37:37:99:1363,105,0	1/1:0,20:20:60.20:779,60,0	1/1:0,20:20:60.20:779,60,0	1/1:0,28:28:78.25:1013,78,0	1/1:0,17:17:51.17:662,51,0	1/1:0,22:22:60.20:779,60,0	1/1:0,20:20:51.17:662,51,0	1/1:2,17:19:54.10:664,54,0	1/1:0,22:22:66.21:857,66,0	1/1:0,27:27:81.26:1052,81,0	1/1:0,25:25:72.23:931,72,0	1/1:1,10:11:27.09:350,27,0
chr10	33158942	.	CTTT	C	18765.88	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=2.397;DP=672;FS=2.662;HRun=11;HaplotypeScore=111.1928;InbreedingCoeff=0.9893;MQ=70.29;MQ0=0;MQRankSum=-4.487;QD=30.61;ReadPosRankSum=4.079;VQSLOD=4.1688;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,24:27:54.16:710,54,0	1/1:2,13:15:39.12:513,39,0	0/0:14,0:15:29.09:0,29,460	0/0:15,0:15:24.13:0,24,518	1/1:2,31:33:78.85:1041,79,0	1/1:4,16:20:42.11:552,42,0	1/1:1,9:10:21.06:276,21,0	1/1:6,24:30:72.15:914,72,0	1/1:3,24:27:66.20:867,66,0	1/1:4,25:29:75.20:968,75,0	1/1:2,23:25:57.15:749,57,0	1/1:4,31:36:85.79:1141,86,0	1/1:2,22:24:60.19:789,60,0	1/1:2,22:24:57.17:749,57,0	0/0:28,0:29:78.25:0,78,1510	1/1:2,26:28:72.22:946,72,0	1/1:3,15:18:45.13:591,45,0	1/1:4,10:14:24.05:315,24,0	1/1:4,12:16:36.09:473,36,0	1/1:6,35:41:93.24:1222,93,0	1/1:0,7:7:15.03:197,15,0	1/1:3,21:24:49.63:668,50,0	1/1:3,27:30:78.23:1025,78,0	1/1:4,12:16:26.98:354,27,0	1/1:1,32:33:65.98:867,66,0	1/1:4,34:38:99:1340,102,0	1/1:3,34:37:93.27:1222,93,0	1/1:3,7:10:21.06:276,21,0
chr10	33164138	.	GTTTTGCCA	G	781.28	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.231;DP=650;FS=8.847;HRun=0;HaplotypeScore=160.5438;InbreedingCoeff=0.9867;MQ=88.93;MQ0=0;MQRankSum=-4.577;QD=60.10;ReadPosRankSum=-0.171;VQSLOD=3.1075;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,13:13:30.10:876,30,0	0/0:6,0:6:18.05:0,18,706	0/0:32,0:32:87.28:0,87,3461	0/0:21,0:21:32.31:0,32,1728	0/0:32,0:32:96.33:0,96,4294	0/0:29,0:29:87.28:0,87,3654	0/0:20,0:20:60.16:0,60,2457	0/0:35,0:35:99:0,102,4266	0/0:27,0:27:78.27:0,78,3534	0/0:31,0:31:90.30:0,90,3830	0/0:20,0:20:54.19:0,54,2445	0/0:24,0:24:72.24:0,72,3137	0/0:30,0:30:90.31:0,90,3935	0/0:28,0:28:84.29:0,84,3736	0/0:28,0:28:84.29:0,84,3686	0/0:21,0:21:63.22:0,63,2797	0/0:21,0:21:63.22:0,63,2854	0/0:13,0:13:30.03:0,30,1100	0/0:17,0:17:51.17:0,51,2174	0/0:25,0:25:75.24:0,75,3132	0/0:33,0:33:99:0,99,4397	0/0:22,0:22:63.22:0,63,2607	0/0:19,0:19:57.20:0,57,2580	0/0:23,0:23:69.24:0,69,3051	0/0:12,0:12:36.12:0,36,1600	0/0:29,0:29:87.28:0,87,3562	0/0:32,0:32:96.32:0,96,4079	0/0:7,0:7:21.07:0,21,950
chr10	33167582	.	G	GTTCT	13618.36	PASS	AB=0.883;AC=51;AF=0.911;AN=56;BaseQRankSum=-3.490;DP=550;FS=4.300;HRun=0;HaplotypeScore=78.9798;InbreedingCoeff=0.3389;MQ=66.72;MQ0=2;MQRankSum=-0.579;QD=25.55;ReadPosRankSum=-0.181;VQSLOD=4.4139;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:11,19:30:30.10:701,30,0	1/1:0,6:6:18.02:368,18,0	0/1:19,0:8:5.08:5,0,44	0/1:23,0:15:3.91:4,0,61	1/1:5,27:34:83.95:1619,84,0	1/1:4,5:9:6.02:129,6,0	1/1:5,13:19:9.03:222,9,0	1/1:33,0:33:66.19:1056,66,0	1/1:0,13:13:15.05:370,15,0	1/1:3,14:17:45.15:1018,45,0	1/1:2,20:22:60.13:1114,60,0	1/1:1,0:16:3:26,3,0	1/1:4,13:20:21.07:517,21,0	1/1:0,0:17:9.03:147,9,0	0/0:17,0:17:48.12:0,48,743	1/1:3,15:18:14.98:334,15,0	1/1:4,14:18:18.06:444,18,0	1/1:7,19:26:15.05:370,15,0	0/1:12,13:25:54.84:617,0,55	1/1:6,18:26:57.14:1220,57,0	1/1:8,8:17:9.03:222,9,0	1/1:2,5:7:18.06:342,18,0	1/1:3,0:13:6:75,6,0	1/1:4,0:22:3.01:52,3,0	1/1:3,16:19:18.06:444,18,0	1/1:5,20:26:66.22:1477,66,0	1/1:7,18:26:24.08:557,24,0	1/1:3,8:11:9.01:172,9,0
chr10	33169192	.	A	AG	8895.79	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-13.484;DP=577;FS=6.926;HRun=7;HaplotypeScore=58.8053;InbreedingCoeff=0.9745;MQ=73.53;MQ0=1;MQRankSum=-1.748;QD=28.98;ReadPosRankSum=0.285;VQSLOD=5.3628;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:81.10:0,81,770	1/1:1,11:12:27.08:326,27,0	0/0:16,0:15:23.92:0,24,211	0/0:10,0:9:20.93:0,21,182	0/0:17,0:17:48.03:0,48,450	0/0:27,0:27:72.10:0,72,690	0/0:20,0:20:42.06:0,42,406	1/1:6,21:27:35.50:628,36,0	0/0:23,0:23:54.07:0,54,516	1/1:4,17:21:54.13:637,54,0	1/1:5,18:23:54.17:650,54,0	0/0:17,0:17:51.07:0,51,488	1/1:2,27:30:74.83:905,75,0	0/0:20,0:20:57.09:0,57,550	0/0:31,0:31:75.08:0,75,715	1/1:4,20:24:57.17:689,57,0	0/0:30,0:30:87.09:0,87,826	1/1:1,12:13:33.10:398,33,0	1/1:4,20:23:60.18:721,60,0	1/1:4,16:20:22.13:530,22,0	1/1:2,26:29:46.26:837,46,0	1/1:0,10:10:30.09:360,30,0	0/0:12,0:12:33.05:0,33,318	0/0:17,0:17:45.07:0,45,434	1/1:2,17:19:41.98:504,42,0	1/1:2,27:29:81.24:967,81,0	1/1:2,22:24:60.10:705,60,0	1/1:0,2:2:3.01:36,3,0
chr10	33171142	.	AT	A	11314.63	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=5.367;DP=484;FS=7.599;HRun=7;HaplotypeScore=73.1066;InbreedingCoeff=0.9694;MQ=72.77;MQ0=0;MQRankSum=-4.159;QD=27.07;ReadPosRankSum=5.019;VQSLOD=5.3075;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:51.15:0,51,627	1/1:0,8:8:18.04:184,18,0	0/0:15,0:15:42.09:0,42,478	0/0:12,0:12:33.05:0,33,367	1/1:5,34:39:99:1009,99,0	1/1:1,20:21:57.13:581,57,0	1/1:0,8:8:21.05:214,21,0	1/1:4,29:33:84.17:850,84,0	1/1:0,19:19:57.13:581,57,0	1/1:3,16:19:48.11:489,48,0	1/1:2,30:32:84.10:843,84,0	1/1:0,8:8:21.05:214,21,0	1/1:0,21:21:54.12:551,54,0	1/1:0,11:11:27.06:275,27,0	0/0:21,0:21:63.19:0,63,780	1/1:0,17:17:51.12:520,51,0	1/1:2,12:14:36.08:367,36,0	1/1:1,9:10:27.06:275,27,0	1/1:1,18:19:54.07:534,54,0	1/1:2,22:24:66.15:673,66,0	1/1:0,5:5:12.03:122,12,0	1/1:1,14:15:39.09:398,39,0	1/1:2,12:14:33.07:337,33,0	1/1:0,8:8:21.05:214,21,0	1/1:1,19:20:57.13:581,57,0	1/1:2,19:21:57.13:581,57,0	1/1:0,29:29:81.18:826,81,0	1/1:0,3:3:9.02:92,9,0
chr10	33172143	.	A	AT	12346.70	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-7.216;DP=479;FS=5.234;HRun=7;HaplotypeScore=47.0144;InbreedingCoeff=0.9221;MQ=72.21;MQ0=1;MQRankSum=-4.490;QD=28.98;ReadPosRankSum=1.438;VQSLOD=5.4469;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,23:27:75.20:876,75,0	1/1:1,5:6:15.05:181,15,0	0/0:22,0:19:41.38:0,41,368	0/0:14,0:11:10.52:0,11,157	1/1:2,26:28:78.15:904,78,0	1/1:2,26:28:72.22:870,72,0	1/1:0,6:6:15.05:181,15,0	1/1:9,20:29:60.16:701,60,0	1/1:4,15:19:39.12:471,39,0	1/1:8,14:22:48.15:575,48,0	1/1:4,17:21:51.11:596,51,0	1/1:2,12:14:33.10:399,33,0	1/1:3,21:24:51.16:616,51,0	1/1:2,9:11:21.06:254,21,0	0/0:17,0:17:51.08:0,51,492	1/1:0,13:13:36.11:435,36,0	1/1:2,13:15:36.11:433,36,0	1/1:2,15:17:45.14:542,45,0	1/1:4,8:12:24.07:290,24,0	1/1:1,24:25:72.14:833,72,0	1/1:0,2:2:6.02:72,6,0	1/1:1,8:9:23.99:271,24,0	1/1:2,16:18:42.07:490,42,0	1/1:1,5:6:12.04:145,12,0	1/1:1,17:18:42.13:507,42,0	1/1:1,22:23:66.20:797,66,0	1/1:3,24:26:57.17:689,57,0	1/1:0,6:6:18.06:217,18,0
chr10	33174324	.	GA	G	345.86	PASS	AC=16;AF=0.727;AN=22;BaseQRankSum=-2.382;DP=58;FS=6.990;HRun=2;HaplotypeScore=6.4189;InbreedingCoeff=0.3372;MQ=52.71;MQ0=6;MQRankSum=-1.804;QD=12.81;ReadPosRankSum=0.650;VQSLOD=1.8516;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:1,2:1:2.90:0,3,16	0/0:5,0:1:3.01:0,3,41	./.	./.	0/0:1,0:1:2.68:0,3,11	./.	1/1:0,1:1:2.97:20,3,0	1/1:0,2:2:6.02:78,6,0	./.	1/1:0,2:2:3.01:33,3,0	1/1:2,5:6:3.01:39,3,0	./.	./.	./.	./.	./.	./.	1/1:0,4:4:6.02:77,6,0	./.	./.	1/1:0,3:2:3.01:39,3,0	./.	./.	1/1:0,5:3:9.03:113,9,0	1/1:0,3:3:3.01:39,3,0	./.
chr10	33175830	.	A	AT	8974.46	PASS	AB=0.873;AC=53;AF=0.946;AN=56;BaseQRankSum=-3.043;DP=491;FS=2.280;HRun=1;HaplotypeScore=110.8336;InbreedingCoeff=-0.0137;MQ=74.32;MQ0=0;MQRankSum=-1.569;QD=18.28;ReadPosRankSum=5.445;VQSLOD=5.3605;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:15:12.87:216,13,0	0/1:3,0:3:11.57:12,0,15	0/1:7,3:11:45.90:67,0,46	0/1:11,3:15:8.20:125,0,8	1/1:21,0:21:39.74:409,40,0	1/1:31,0:31:64.64:623,65,0	1/1:11,0:11:32.62:224,33,0	1/1:34,0:34:76.91:546,77,0	1/1:24,0:24:71.44:525,71,0	1/1:20,0:20:33.33:348,33,0	1/1:25,0:25:41.83:470,42,0	1/1:12,0:12:35.68:261,36,0	1/1:19,0:19:53.42:370,53,0	1/1:17,0:17:50.40:352,50,0	1/1:15,0:15:38.66:275,39,0	1/1:13,0:13:10.88:222,11,0	1/1:10,0:10:26.77:193,27,0	1/1:16,0:16:45.67:355,46,0	1/1:14,0:14:38.07:226,38,0	1/1:31,0:31:77.15:553,77,0	1/1:11,0:11:29.60:197,30,0	1/1:11,0:11:32.86:269,33,0	1/1:21,0:21:56.66:427,57,0	1/1:11,0:11:29.67:208,30,0	1/1:15,0:15:18.63:234,19,0	1/1:23,0:23:45.22:425,45,0	1/1:28,0:28:74.52:562,75,0	1/1:14,0:14:38.69:282,39,0
chr10	33177084	.	G	GA	12191.87	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-6.387;DP=574;FS=14.172;HRun=7;HaplotypeScore=90.5896;InbreedingCoeff=0.8252;MQ=66.96;MQ0=6;MQRankSum=-3.160;QD=26.39;ReadPosRankSum=3.691;VQSLOD=4.1220;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,20:25:41.21:458,41,0	1/1:2,3:5:9.03:109,9,0	0/0:44,0:25:49.05:0,49,437	0/0:51,0:18:30.26:0,30,263	1/1:12,19:32:54.48:600,54,0	1/1:4,27:31:81.13:927,81,0	1/1:2,18:20:51.16:616,51,0	1/1:9,25:34:69.16:782,69,0	1/1:2,15:17:16.12:462,16,0	1/1:8,16:24:57.17:678,57,0	1/1:2,17:19:54.08:620,54,0	1/1:4,18:22:57.13:670,57,0	1/1:5,13:18:10.11:405,10,0	1/1:6,21:27:60.06:674,60,0	0/0:16,0:16:33.05:0,33,317	1/1:1,8:9:24.07:287,24,0	1/1:2,10:12:21.06:253,21,0	1/1:3,5:7:0.09:163,0,0	1/1:2,13:15:42.10:491,42,0	1/1:2,11:13:33.10:397,33,0	1/1:1,17:18:51.16:616,51,0	1/1:4,7:11:23.82:234,24,0	1/1:3,9:12:4.12:332,4,0	1/1:8,8:16:22.23:223,22,0	1/1:6,11:18:32.93:333,33,0	1/1:3,23:26:75.16:883,75,0	1/1:2,24:26:69.21:832,69,0	1/1:0,4:4:12.04:145,12,0
chr10	33177100	.	TGAGAGAGA	T	1701.97	PASS	AB=0.863;AC=17;AF=0.327;AN=52;BaseQRankSum=2.921;DP=526;FS=49.762;HRun=0;HaplotypeScore=170.7501;InbreedingCoeff=0.1217;MQ=59.58;MQ0=22;MQRankSum=-4.576;QD=7.56;ReadPosRankSum=-2.470;VQSLOD=0.8514;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:21:6.33:0,6,118	0/0:1,0:2:6.02:0,6,96	./.	./.	0/1:17,4:21:60.25:209,0,60	0/1:28,1:32:99:142,0,167	0/1:15,0:15:14.23:19,0,14	0/0:23,0:23:2.70:0,3,38	0/1:13,1:14:66.59:138,0,67	0/0:21,0:22:16.04:0,16,379	0/0:16,0:18:15.01:0,15,177	1/1:16,2:19:12.04:261,12,0	0/1:11,1:15:56.85:57,0,173	1/1:15,6:21:15.05:375,15,0	0/0:11,0:15:12.04:0,12,362	0/0:7,0:9:2.11:0,2,233	0/1:9,0:12:9.55:107,0,10	0/0:12,0:11:19.80:0,20,215	0/0:14,0:14:19.28:0,19,269	0/0:12,0:12:5.99:0,6,49	0/0:17,0:17:15.05:0,15,238	0/1:6,0:8:0.39:0,0,52	1/1:8,1:9:6.02:129,6,0	1/1:6,6:12:15.07:323,15,0	0/1:16,1:18:6.10:6,0,221	0/1:23,1:26:96.49:96,0,356	0/0:21,0:21:5.22:0,5,198	0/0:5,0:5:9.03:0,9,231
chr10	33178271	.	GCATCTCACACACACACACACA	G	11842.58	PASS	AB=0.698;AC=25;AF=0.543;AN=46;BaseQRankSum=-8.067;DP=474;FS=1.228;HRun=0;HaplotypeScore=190.1191;InbreedingCoeff=0.4242;MQ=66.76;MQ0=5;MQRankSum=1.580;QD=41.41;ReadPosRankSum=-2.975;VQSLOD=3.6416;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:29:20.96:0,21,640	1/1:0,2:3:6.02:231,6,0	0/1:19,0:11:31.70:439,0,32	0/1:31,0:21:98.52:485,0,99	./.	0/0:1,0:12:12.04:0,12,626	0/1:12,0:14:99:145,0,434	1/1:4,23:26:75.22:1482,75,0	0/1:1,0:16:17.93:18,0,1456	1/1:1,13:11:24.08:917,24,0	0/1:1,9:9:0:0,0,0	0/1:2,0:21:33.69:34,0,272	1/1:2,29:34:45.15:2536,45,0	0/0:1,0:16:18.06:0,18,672	0/0:5,0:16:11.94:0,12,687	1/1:1,26:27:33.11:1528,33,0	0/0:3,0:22:21.07:0,21,1061	./.	1/1:1,11:12:33.09:1017,33,0	0/1:1,10:12:0:0,0,0	./.	./.	0/0:0,0:5:3.01:0,3,144	0/0:1,0:30:17.42:0,17,611	1/1:0,4:5:6.02:108,6,0	1/1:1,22:19:51.17:1805,51,0	1/1:3,11:15:21.07:1098,21,0	./.
chr10	33178320	.	CAGAGACAGAG	C	1222.53	PASS	AB=0.714;AC=7;AF=0.125;AN=56;BaseQRankSum=4.181;DP=660;FS=1.018;HRun=0;HaplotypeScore=241.2677;InbreedingCoeff=0.8458;MQ=55.48;MQ0=28;MQRankSum=-5.013;QD=18.81;ReadPosRankSum=1.166;VQSLOD=2.6805;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:36:72.24:0,72,3069	0/0:5,0:5:12.04:0,12,487	0/0:56,0:16:45.03:0,45,1643	0/0:75,0:37:83.98:0,84,2354	0/0:14,0:9:17.99:0,18,737	0/0:23,0:22:39.13:0,39,1648	0/0:18,0:15:33.11:0,33,1245	0/0:36,0:33:60.20:0,60,2488	0/0:25,0:24:48.16:0,48,1901	0/0:24,0:21:54.19:0,54,2454	0/0:15,0:15:12.04:0,12,613	1/1:3,9:11:24.08:592,24,0	0/0:41,0:38:87.24:0,87,2985	1/1:9,9:18:17.85:502,18,0	0/0:25,0:21:39.13:0,39,1642	0/0:27,0:26:48.16:0,48,1792	0/0:30,0:28:63.22:0,63,2601	0/0:5,0:5:15.02:0,15,518	0/0:19,0:17:42.14:0,42,1514	0/0:13,0:13:21.07:0,21,924	0/0:44,0:43:75.23:0,75,3692	0/0:7,0:7:12.04:0,12,528	0/1:3,2:4:0:0,0,0	1/1:17,12:26:10.79:263,11,0	0/0:18,0:18:36.06:0,36,1403	0/0:17,0:15:45.15:0,45,1583	0/0:18,0:16:42.14:0,42,1657	0/0:3,0:2:3.01:0,3,153
chr10	33178492	.	AAGATATAGAGAGAGAGAG	A	6142.51	PASS	AB=1.000;AC=39;AF=0.780;AN=50;BaseQRankSum=-2.939;DP=360;FS=30.433;HRun=0;HaplotypeScore=111.2172;InbreedingCoeff=0.3623;MQ=74.16;MQ0=22;MQRankSum=-3.310;QD=30.56;ReadPosRankSum=3.024;VQSLOD=1.9490;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:10:3.01:50,3,0	1/1:0,6:6:9.03:434,9,0	0/0:49,0:16:27.79:0,28,229	0/0:69,0:22:35.07:0,35,313	1/1:8,0:5:9.01:111,9,0	0/1:15,0:10:41.60:42,0,128	0/1:9,0:7:86.24:86,0,167	1/1:3,12:12:36.05:500,36,0	./.	1/1:0,13:11:33.07:902,33,0	1/1:0,8:7:12.04:612,12,0	1/1:8,0:2:6:73,6,0	1/1:7,0:5:12.04:155,12,0	0/0:9,0:7:3.01:0,3,69	1/1:13,0:9:9.49:125,9,0	1/1:2,10:11:9.03:447,9,0	0/0:4,0:6:3.01:0,3,189	1/1:3,0:3:3.01:44,3,0	1/1:1,4:4:12.04:514,12,0	1/1:0,9:8:3.01:154,3,0	1/1:9,0:9:9.03:139,9,0	1/1:1,12:12:12.04:522,12,0	./.	0/1:11,0:11:43.70:44,0,67	1/1:1,5:7:12.04:592,12,0	1/1:0,13:11:30.08:549,30,0	./.	1/1:1,0:1:3.01:48,3,0
chr10	33178494	.	GAT	G	1223.85	PASS	AB=0.871;AC=46;AF=0.885;AN=52;BaseQRankSum=-1.264;DP=339;FS=12.333;HRun=0;HaplotypeScore=80.0250;InbreedingCoeff=0.1738;MQ=75.92;MQ0=20;MQRankSum=-3.206;QD=3.84;ReadPosRankSum=1.725;VQSLOD=0.6225;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:8:3.88:26,4,0	1/1:6,0:6:6.15:29,6,0	0/1:48,0:16:6.92:7,0,92	0/1:63,0:21:1.24:1,0,129	1/1:8,0:5:8.95:67,9,0	1/1:15,0:10:5.99:48,6,0	0/1:9,0:7:5.99:63,0,6	1/1:14,0:12:23.80:168,24,0	0/1:0,9:9:0:0,0,0	1/1:13,0:11:26.18:163,26,0	1/1:8,0:7:11.09:53,11,0	1/1:6,2:2:5.94:42,6,0	1/1:6,0:4:11.81:77,12,0	1/1:1,8:7:3.01:42,3,0	1/1:13,0:7:5.99:49,6,0	1/1:10,0:10:6.93:32,7,0	0/0:8,0:6:2.37:0,2,8	1/1:3,0:3:2.98:21,3,0	1/1:4,0:4:11.52:68,12,0	1/1:9,0:8:2.84:14,3,0	1/1:9,0:9:8.96:69,9,0	1/1:13,0:12:8.52:43,9,0	./.	1/1:10,0:10:3.47:25,3,0	1/1:6,0:6:11.02:52,11,0	1/1:13,0:11:20.70:146,21,0	./.	1/1:1,0:1:2.99:24,3,0
chr10	33179376	.	AAGAGAGAGAGAGAGAGAG	A	4495.31	PASS	AB=0.889;AC=23;AF=0.442;AN=52;BaseQRankSum=4.901;DP=303;FS=31.024;HRun=0;HaplotypeScore=78.9170;InbreedingCoeff=0.5313;MQ=33.23;MQ0=32;MQRankSum=-1.304;QD=39.43;ReadPosRankSum=2.794;VQSLOD=2.1118;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	0/0:4,0:3:1.55:0,2,4	./.	0/0:55,0:8:2.03:0,2,5	0/0:8,0:9:9.50:0,10,488	0/0:9,0:8:2.29:0,2,235	0/0:20,0:11:9.50:0,10,414	1/1:8,2:8:5.81:76,6,0	0/0:4,0:4:3.01:0,3,229	0/1:7,0:6:52.64:53,0,118	1/1:3,6:9:17.93:401,18,0	0/0:6,0:7:9.03:0,9,412	1/1:1,4:4:9.03:437,9,0	0/0:3,0:2:3.01:0,3,204	0/0:2,0:2:3.01:0,3,99	1/1:4,4:6:9.03:438,9,0	0/0:4,0:6:9.03:0,9,380	0/0:2,0:1:3.01:0,3,105	1/1:9,4:8:12.02:274,12,0	1/1:4,5:9:13.58:710,14,0	0/0:4,0:4:3.01:0,3,69	1/1:8,4:10:1.02:142,1,0	0/0:8,0:6:5.85:0,6,171	0/0:2,0:3:6.02:0,6,173	1/1:8,3:8:1.54:143,2,0	1/1:3,3:5:9.03:215,9,0	1/1:1,9:9:14.90:729,15,0	1/1:3,10:13:18.06:877,18,0
chr10	33180649	.	GA	G	10169.54	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=6.036;DP=653;FS=2.105;HRun=7;HaplotypeScore=69.4975;InbreedingCoeff=0.9874;MQ=79.97;MQ0=0;MQRankSum=-0.126;QD=27.12;ReadPosRankSum=0.887;VQSLOD=5.6356;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:66.21:0,66,830	1/1:1,13:14:36.08:367,36,0	0/0:15,1:16:7.61:0,8,289	0/0:17,0:17:30.09:0,30,371	0/0:28,0:28:81.26:0,81,1019	0/0:27,0:27:81.26:0,81,1019	0/0:18,0:18:54.15:0,54,654	1/1:1,30:31:90.17:899,90,0	0/0:26,0:26:66.20:0,66,819	1/1:0,22:22:66.12:664,66,0	1/1:1,28:29:78.18:796,78,0	0/0:18,0:18:45.13:0,45,553	1/1:1,25:26:66.15:674,66,0	0/0:26,0:26:75.22:0,75,915	0/0:27,0:27:78.24:0,78,969	1/1:3,22:25:22.39:544,22,0	0/0:8,0:8:24.08:0,24,302	1/1:0,10:10:30.07:306,30,0	1/1:3,26:29:75.13:754,75,0	1/1:1,36:37:99:1014,102,0	1/1:4,28:32:81.18:826,81,0	1/1:1,29:30:84.19:857,84,0	0/0:20,0:20:48.14:0,48,591	0/0:24,0:24:69.20:0,69,854	1/1:1,23:24:69.15:704,69,0	1/1:3,26:29:78.15:787,78,0	1/1:1,27:28:78.18:796,78,0	1/1:0,9:9:18.04:184,18,0
chr10	33183369	.	C	CA	1872.48	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=5.029;DP=560;FS=1.077;HRun=7;HaplotypeScore=75.8024;InbreedingCoeff=0.9875;MQ=69.36;MQ0=0;MQRankSum=-4.456;QD=24.97;ReadPosRankSum=-0.768;VQSLOD=3.6968;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:27:75.12:0,75,724	0/0:5,0:5:12.01:0,12,116	0/0:21,0:21:43.55:0,44,385	0/0:22,0:20:24.49:0,24,236	0/0:26,0:26:69.11:0,69,666	0/0:31,0:31:87.11:0,87,828	0/0:10,0:10:30.05:0,30,290	0/0:23,0:23:52.26:0,52,518	0/0:18,0:18:51.08:0,51,492	0/0:31,0:31:72.09:0,72,688	0/0:21,0:21:57.08:0,57,544	1/1:7,15:22:54.14:622,54,0	0/0:21,0:21:57.09:0,57,550	1/1:3,14:17:42.13:506,42,0	0/0:26,0:26:69.11:0,69,666	0/0:20,0:20:48.04:0,48,451	0/0:28,0:28:72.11:0,72,695	0/0:9,0:9:27.04:0,27,260	0/0:12,0:12:36.06:0,36,348	0/0:26,0:26:57.07:0,57,545	0/0:15,0:15:42.07:0,42,406	0/0:17,0:17:48.06:0,48,458	1/1:5,15:20:45.14:543,45,0	1/1:2,14:16:30.09:361,30,0	0/0:10,0:10:24.01:0,24,225	0/0:31,0:31:84.13:0,84,811	0/0:26,0:25:69.11:0,69,665	0/0:6,0:6:18.03:0,18,174
chr10	33183399	.	GTGAC	G	2416.10	PASS	AB=0.632;AC=7;AF=0.125;AN=56;BaseQRankSum=9.534;DP=530;FS=0.000;HRun=0;HaplotypeScore=114.7863;InbreedingCoeff=0.8337;MQ=86.23;MQ0=0;MQRankSum=-9.676;QD=40.95;ReadPosRankSum=0.157;VQSLOD=3.3127;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:66.23:0,66,1778	0/0:10,0:10:30.10:0,30,808	0/0:21,0:21:60.19:0,60,1494	0/0:33,0:33:77.84:0,78,1912	0/0:26,0:26:75.26:0,75,2011	0/0:25,0:25:72.23:0,72,1848	0/0:13,0:13:36.12:0,36,914	0/0:27,0:27:78.27:0,78,2086	0/0:15,0:15:45.15:0,45,1191	0/0:25,0:25:72.25:0,72,1942	0/0:10,0:10:30.10:0,30,822	1/1:2,17:20:54.19:1033,54,0	0/0:17,0:17:45.15:0,45,1232	1/1:1,13:14:36.12:695,36,0	0/0:22,0:22:66.20:0,66,1618	0/0:20,0:20:57.20:0,57,1544	0/0:28,0:28:75.22:0,75,1909	0/0:10,0:10:30.10:0,30,793	0/0:16,0:16:48.16:0,48,1215	0/0:27,0:27:72.25:0,72,1884	0/0:18,0:18:45.15:0,45,1231	0/0:14,0:14:39.13:0,39,1065	1/1:3,10:13:36.11:643,36,0	0/1:5,7:12:51.57:194,0,52	0/0:10,0:10:27.09:0,27,740	0/0:31,0:31:93.32:0,93,2481	0/0:22,0:21:60.21:0,60,1629	0/0:6,0:6:18.06:0,18,492
chr10	33183491	.	CACATACACAT	C	4443.19	PASS	AB=1.000;AC=34;AF=0.630;AN=54;BaseQRankSum=0.321;DP=599;FS=8.766;HRun=0;HaplotypeScore=180.4162;InbreedingCoeff=-0.2923;MQ=48.07;MQ0=32;MQRankSum=2.792;QD=8.21;ReadPosRankSum=-3.272;VQSLOD=2.4397;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:23:3.01:43,3,0	0/1:8,0:8:72.18:106,0,72	0/1:13,0:4:6.73:7,0,94	0/0:19,0:6:9.87:0,10,82	1/1:38,0:37:3.01:43,3,0	1/1:5,21:24:6.02:178,6,0	1/1:16,0:14:18.06:269,18,0	0/1:28,0:26:99:224,0,249	1/1:8,0:8:3.01:58,3,0	0/1:27,0:24:99:242,0,221	./.	0/1:21,0:20:39.82:40,0,55	0/1:16,0:16:70.07:349,0,70	0/1:20,0:19:24.27:24,0,149	0/0:25,0:23:11.96:0,12,1204	0/1:21,0:20:36:217,0,36	1/1:23,0:23:5.74:358,6,0	0/1:20,0:17:24.88:125,0,25	1/1:16,0:13:30.95:347,31,0	0/1:33,0:31:0.09:0,0,0	0/1:33,0:26:3.10:317,0,3	1/1:23,0:22:4.42:30,4,0	0/1:24,0:24:99:117,0,231	0/1:33,0:32:99:375,0,275	0/1:15,0:14:34.16:34,0,78	0/1:25,0:25:47.99:625,0,48	0/1:23,0:21:27.50:37,0,28	1/1:6,0:5:15.04:278,15,0
chr10	33183493	.	CAT	C	2547.93	PASS	AB=0.908;AC=38;AF=0.704;AN=54;BaseQRankSum=6.194;DP=606;FS=19.070;HRun=0;HaplotypeScore=145.2606;InbreedingCoeff=-0.1573;MQ=48.13;MQ0=32;MQRankSum=2.979;QD=4.58;ReadPosRankSum=-0.224;VQSLOD=1.2478;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,17:24:5.81:33,6,0	1/1:8,0:8:20.86:154,21,0	0/0:16,0:5:1.30:0,1,58	0/0:20,0:7:1.25:0,1,33	1/1:2,0:38:2.92:17,3,0	1/1:25,0:23:5.83:33,6,0	1/1:15,0:13:17.84:135,18,0	0/1:26,2:26:99:112,0,152	1/1:8,0:8:5.82:41,6,0	0/1:29,0:26:39.47:156,0,39	./.	0/1:23,0:22:26.74:72,0,27	1/1:12,4:16:43.25:309,43,0	0/1:20,0:19:41.59:48,0,42	0/1:25,0:23:19.81:20,0,394	0/1:17,4:20:29.44:199,0,29	1/1:23,0:23:15.04:209,15,0	0/1:19,0:16:4.03:51,0,4	1/1:7,0:13:25.49:148,25,0	0/1:5,0:29:0:0,0,0	1/1:32,2:27:7.84:178,8,0	0/1:23,0:22:10.07:18,0,10	0/1:23,0:23:56.59:57,0,74	0/1:32,1:32:55.12:186,0,55	1/1:4,11:14:4.96:73,5,0	1/1:6,19:25:13.47:317,13,0	0/1:8,15:22:11.86:12,0,40	1/1:7,0:6:17.21:116,17,0
chr10	33183495	.	T	TAC	2467.05	PASS	AB=0.972;AC=33;AF=0.611;AN=54;BaseQRankSum=4.765;DP=610;FS=27.806;HRun=0;HaplotypeScore=154.5186;InbreedingCoeff=0.0294;MQ=48.27;MQ0=32;MQRankSum=5.036;QD=4.84;ReadPosRankSum=0.536;VQSLOD=1.5684;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:25:5.85:57,6,0	1/1:8,0:8:16.60:220,17,0	0/0:16,0:5:14.87:0,15,157	0/0:22,0:10:17.03:0,17,141	1/1:39,0:38:0.47:1,0,0	0/0:24,0:22:5.68:0,6,28	0/1:15,0:13:0.01:0,0,0	0/1:27,0:25:99:223,0,255	1/1:8,0:8:1.26:4,1,0	0/1:30,0:27:90.03:224,0,90	./.	1/1:22,0:21:1.75:33,2,0	1/1:16,0:16:29.92:349,30,0	1/1:21,0:20:4.07:28,4,0	0/0:23,0:21:45.57:0,46,557	0/1:23,0:22:34.79:275,0,35	0/1:23,0:23:2.05:31,0,2	0/1:10,9:16:18.64:19,0,41	1/1:17,0:13:18.04:220,18,0	0/1:31,0:29:0:0,0,0	0/1:35,0:28:15.54:238,0,16	1/1:24,0:23:1.55:4,2,0	0/1:22,0:23:1.49:1,0,31	1/1:34,0:33:21.73:161,22,0	0/1:16,0:15:20.29:37,0,20	0/1:24,0:24:12.62:447,0,13	0/1:21,0:19:33.01:33,0,53	0/1:7,0:6:14.15:14,0,26
chr10	33183499	.	CAT	C	2908.42	PASS	AB=0.916;AC=37;AF=0.685;AN=54;BaseQRankSum=5.544;DP=612;FS=46.911;HRun=0;HaplotypeScore=146.9657;InbreedingCoeff=0.0870;MQ=50.73;MQ0=26;MQRankSum=3.974;QD=5.52;ReadPosRankSum=1.017;VQSLOD=0.9009;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:26,2:26:12.39:25,0,12	1/1:7,0:7:17.87:130,18,0	0/0:22,0:7:16.46:0,16,197	0/0:26,0:12:4.97:0,5,334	1/1:39,0:38:2.92:17,3,0	1/1:24,0:22:5.83:33,6,0	1/1:14,0:12:17.83:134,18,0	0/1:27,0:25:99:156,0,103	1/1:8,0:8:5.71:40,6,0	0/1:11,19:27:17.19:202,0,17	./.	1/1:21,0:20:17.25:117,17,0	1/1:14,1:15:40.91:292,41,0	1/1:22,0:21:0.65:76,1,0	0/0:22,0:21:11.99:0,12,665	0/1:23,0:22:22.98:181,0,23	0/1:23,0:23:8.20:173,0,8	0/1:18,0:15:5.37:49,0,5	1/1:12,0:10:23.24:144,23,0	0/1:30,0:29:0:0,0,0	1/1:35,0:30:3.77:198,4,0	0/1:6,16:21:0.10:0,0,0	0/1:23,0:23:8.93:162,0,9	1/1:35,0:34:44.75:323,45,0	0/1:18,1:18:4.17:92,0,4	1/1:21,0:21:11.44:300,11,0	0/1:22,0:20:25.47:30,0,25	1/1:8,1:8:23.32:186,23,0
chr10	33183912	.	AGTTAAAACTGT	A	25039.80	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=19.137;DP=600;FS=7.104;HRun=0;HaplotypeScore=211.1341;InbreedingCoeff=0.9605;MQ=73.93;MQ0=0;MQRankSum=-16.332;QD=77.76;ReadPosRankSum=1.189;VQSLOD=3.8710;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:63.22:0,63,3489	1/1:0,13:13:29.39:902,29,0	0/0:18,0:18:51.10:0,51,1933	0/0:13,0:13:33.08:0,33,1347	0/0:28,0:28:81.25:0,81,4164	0/0:25,0:25:69.24:0,69,3839	0/0:15,0:15:45.14:0,45,2056	1/1:2,31:33:92.99:2129,93,0	0/0:19,0:19:57.16:0,57,2725	1/1:3,28:31:84.19:2725,84,0	1/1:0,22:22:57.10:1660,57,0	0/0:16,0:16:48.16:0,48,2627	1/1:2,32:34:75.26:2644,75,0	0/0:28,0:28:78.25:0,78,3885	0/0:25,0:25:72.23:0,72,3793	1/1:1,17:18:45.15:1538,45,0	0/0:30,0:30:90.31:0,90,5137	1/1:1,3:4:3.01:106,3,0	1/1:2,15:17:45.01:1041,45,0	1/1:1,24:25:60.12:1934,60,0	1/1:0,10:10:18.05:496,18,0	1/1:0,22:22:57.11:1838,57,0	0/0:28,0:28:81.28:0,81,4462	0/0:11,0:11:30.10:0,30,1565	1/1:0,27:27:63.22:2100,63,0	1/1:2,36:38:99:3656,111,0	1/1:1,25:26:60.21:2058,60,0	1/1:0,2:2:6.02:212,6,0
chr10	33184795	.	G	GA	3176.63	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-7.755;DP=535;FS=1.414;HRun=6;HaplotypeScore=55.8130;InbreedingCoeff=0.9708;MQ=66.01;MQ0=0;MQRankSum=-1.997;QD=26.47;ReadPosRankSum=1.362;VQSLOD=4.0164;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,16:18:39.03:484,39,0	0/0:10,0:10:24.05:0,24,244	0/0:25,0:17:23.97:0,24,225	0/0:19,0:10:5.07:0,5,139	1/1:1,29:30:69.22:861,69,0	1/1:1,18:19:51.16:642,51,0	1/1:4,9:13:21.07:264,21,0	0/0:27,0:27:72.15:0,72,728	1/1:3,9:12:27.05:321,27,0	0/0:19,0:19:54.12:0,54,550	0/0:27,0:27:71.52:0,72,711	0/0:16,0:16:48.09:0,48,483	0/0:20,0:20:57.13:0,57,582	0/0:9,0:9:21.04:0,21,214	0/0:24,0:24:69.15:0,69,703	0/0:12,0:12:36.08:0,36,367	1/1:1,27:28:63.20:792,63,0	0/0:16,0:16:36.07:0,36,366	0/0:19,0:19:51.10:0,51,513	0/0:24,0:24:60.13:0,60,612	0/0:7,0:7:18.04:0,18,184	0/0:13,0:13:36.08:0,36,367	0/0:18,0:18:48.11:0,48,489	0/0:12,0:12:33.05:0,33,329	0/0:21,0:21:57.13:0,57,580	0/0:29,0:29:75.17:0,75,765	0/0:23,0:23:60.13:0,60,612	0/0:25,0:25:73.41:0,73,738
chr10	33186350	.	C	CATGT	1140.27	PASS	AB=0.889;AC=11;AF=0.212;AN=52;BaseQRankSum=-6.335;DP=379;FS=0.000;HRun=0;HaplotypeScore=63.9421;InbreedingCoeff=0.6006;MQ=65.03;MQ0=5;MQRankSum=-0.328;QD=12.00;ReadPosRankSum=0.016;VQSLOD=2.3054;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,0:15:2.51:51,3,0	0/0:8,0:8:21.07:0,21,329	0/1:16,0:10:0:0,0,0	./.	0/0:19,0:19:33.11:0,33,498	0/1:15,1:16:46.98:47,0,303	0/0:11,0:11:10.56:0,11,145	0/0:36,0:36:27.05:0,27,341	0/0:6,0:6:9.03:0,9,141	0/0:16,0:16:30.10:0,30,470	0/0:12,0:12:21.04:0,21,285	1/1:4,4:8:9.03:213,9,0	0/0:10,0:10:15.03:0,15,212	1/1:4,9:13:15.05:355,15,0	0/0:14,0:14:12.03:0,12,166	0/0:7,0:7:15.05:0,15,235	0/0:8,0:8:9.03:0,9,136	./.	0/0:9,0:8:15.05:0,15,235	0/0:12,0:12:24.08:0,24,376	0/0:29,0:29:48.15:0,48,729	0/0:8,0:8:9.03:0,9,141	0/1:10,6:16:31.98:267,0,32	1/1:5,6:11:15.05:355,15,0	0/0:14,0:14:27.09:0,27,423	0/0:14,0:14:30.08:0,30,430	0/0:14,0:14:33.11:0,33,506	0/0:8,0:8:15.05:0,15,235
chr10	33186434	.	TTATA	T	103.48	PASS	AB=1.000;AC=7;AF=0.438;AN=16;BaseQRankSum=0.303;DP=101;FS=2.447;HRun=0;HaplotypeScore=27.8631;MQ=97.21;MQ0=1;MQRankSum=-0.182;QD=5.45;ReadPosRankSum=0.667;VQSLOD=1.2625;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:5,1:6:3.01:48,3,0	./.	./.	./.	./.	./.	./.	0/0:19,0:19:9.03:0,9,192	./.	./.	./.	./.	./.	./.	./.	./.	0/0:3,0:5:12.04:0,12,262	1/1:2,2:4:6.02:95,6,0	1/1:5,1:6:3.01:48,3,0	./.	./.	./.	0/1:3,0:3:0:0,0,0	./.	./.	./.	0/0:7,0:9:8.50:0,8,66	0/0:1,0:3:5.49:0,5,25
chr10	33187889	.	G	GC	14263.06	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-18.063;DP=658;FS=8.089;HRun=2;HaplotypeScore=70.1000;InbreedingCoeff=0.9988;MQ=83.56;MQ0=0;MQRankSum=-2.808;QD=39.40;ReadPosRankSum=-0.006;VQSLOD=4.8957;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:51.16:0,51,632	1/1:0,13:13:39.13:562,39,0	0/0:21,0:21:46.29:0,46,625	0/0:16,0:16:38.09:0,38,419	0/0:25,0:25:75.24:0,75,928	0/0:28,0:28:84.26:0,84,1040	0/0:26,0:26:75.20:0,75,913	1/1:4,43:47:99:1714,123,0	0/0:24,0:24:72.23:0,72,892	1/1:0,24:24:69.23:990,69,0	1/1:0,25:25:63.21:907,63,0	0/0:22,0:22:63.20:0,63,781	1/1:0,27:27:75.25:1080,75,0	0/0:25,0:25:69.20:0,69,841	0/0:30,0:30:90.28:0,90,1115	1/1:0,35:35:99:1426,99,0	0/0:23,0:23:66.21:0,66,817	1/1:1,6:7:18.06:259,18,0	1/1:1,18:19:54.16:741,54,0	1/1:1,37:38:99:1425,99,0	1/1:1,15:16:45.15:648,45,0	1/1:1,15:16:45.15:648,45,0	0/0:13,0:13:33.10:0,33,409	0/0:23,0:23:63.20:0,63,778	1/1:0,17:17:51.17:734,51,0	1/1:3,23:26:72.22:1014,72,0	1/1:0,41:41:99:1640,114,0	1/1:0,11:11:33.11:475,33,0
chr10	33189722	.	AT	A	13044.91	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=4.736;DP=618;FS=1.297;HRun=9;HaplotypeScore=60.7329;InbreedingCoeff=0.8817;MQ=76.65;MQ0=0;MQRankSum=-4.904;QD=23.05;ReadPosRankSum=2.859;VQSLOD=5.7435;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,21:22:60.02:549,60,0	1/1:1,14:15:42.02:384,42,0	0/0:16,0:15:5.05:0,5,250	0/0:10,0:10:18:0,18,183	1/1:2,21:23:60.03:548,60,0	1/1:5,20:25:54.03:494,54,0	1/1:2,13:15:36.02:330,36,0	1/1:6,23:30:71.03:627,71,0	1/1:1,16:17:42.02:384,42,0	1/1:4,38:42:99:1043,114,0	1/1:1,16:17:48.02:438,48,0	1/1:2,21:23:63.03:577,63,0	1/1:4,31:35:58.43:789,58,0	1/1:2,22:24:60.02:549,60,0	0/0:26,0:26:69.19:0,69,787	1/1:1,22:23:54.03:494,54,0	1/1:4,20:24:54.02:494,54,0	1/1:0,4:4:12.01:110,12,0	1/1:4,13:17:39.01:357,39,0	1/1:2,28:30:84.04:769,84,0	1/1:2,18:20:45.02:412,45,0	1/1:4,24:28:69.03:632,69,0	1/1:1,25:26:60.03:549,60,0	1/1:0,14:14:39.02:357,39,0	1/1:3,23:26:63.03:577,63,0	1/1:2,30:32:90.01:813,90,0	1/1:5,28:33:81.04:741,81,0	1/1:0,1:1:3:27,3,0
chr10	33190205	.	GA	G	1653.43	PASS	AB=0.900;AC=10;AF=0.179;AN=56;BaseQRankSum=6.358;DP=662;FS=0.450;HRun=10;HaplotypeScore=78.8563;InbreedingCoeff=0.7705;MQ=64.56;MQ0=1;MQRankSum=2.132;QD=15.31;ReadPosRankSum=2.956;VQSLOD=4.1098;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:55.02:0,55,590	0/0:6,0:6:18.05:0,18,199	0/1:16,0:12:7.15:7,0,192	0/0:17,0:14:33.62:0,34,281	0/0:36,1:38:48.94:0,49,738	0/0:32,0:32:87.19:0,87,942	0/0:19,0:19:46.35:0,46,491	0/0:26,0:26:57.12:0,57,600	0/0:23,0:23:63.16:0,63,689	0/0:32,0:33:72.03:0,72,777	0/0:24,0:25:67.56:0,68,707	1/1:2,22:24:53.98:469,54,0	0/0:31,0:32:85.83:0,86,892	1/1:6,23:29:65.96:573,66,0	0/0:35,1:36:76.18:0,76,1048	0/0:23,0:23:60.15:0,60,655	0/0:24,0:24:63.15:0,63,679	0/1:3,1:4:17.03:17,0,57	0/0:20,0:20:57.06:0,57,607	0/0:27,1:30:66.08:0,66,675	0/0:22,1:23:40.12:0,40,671	0/0:24,0:24:63.15:0,63,681	1/1:3,16:19:44.98:391,45,0	1/1:1,15:16:41.99:365,42,0	0/0:30,0:30:81.19:0,81,864	0/0:32,2:36:43.84:0,44,906	0/0:31,0:31:84.23:0,84,929	0/0:5,0:5:15.04:0,15,166
chr10	33190293	.	C	CT	19370.67	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=12.018;DP=620;FS=7.384;HRun=3;HaplotypeScore=137.3286;InbreedingCoeff=0.9966;MQ=73.55;MQ0=1;MQRankSum=-8.229;QD=35.16;ReadPosRankSum=7.134;VQSLOD=2.7694;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:4,14:18:33.11:453,33,0	1/1:0,11:11:33.11:454,33,0	0/0:22,0:22:60.14:0,60,692	0/0:22,0:22:60.18:0,60,713	1/1:3,28:31:69.10:882,69,0	1/1:2,27:29:78.26:1067,78,0	1/1:2,14:14:33.11:453,33,0	1/1:3,21:24:66.22:900,66,0	1/1:0,19:19:48.16:659,48,0	1/1:0,26:26:78.26:1070,78,0	1/1:0,19:19:54.18:742,54,0	1/1:2,13:15:39.13:535,39,0	1/1:4,25:28:78.26:1072,78,0	1/1:3,30:33:87.29:1194,87,0	0/0:25,0:25:72.21:0,72,852	1/1:0,19:19:57.19:783,57,0	1/1:3,23:26:66.19:886,66,0	1/1:0,8:8:18.06:247,18,0	1/1:7,12:19:42.13:559,42,0	1/1:1,32:33:87.29:1194,87,0	1/1:2,12:14:33.07:433,33,0	1/1:1,16:17:45.15:620,45,0	1/1:2,20:21:54.18:740,54,0	1/1:3,14:17:33.11:454,33,0	1/1:2,23:25:66.22:905,66,0	1/1:3,25:28:78.25:1042,78,0	1/1:6,32:38:99:1410,105,0	1/1:0,15:15:45.15:616,45,0
chr10	33190402	.	AGAGAGAGG	A	4589.12	PASS	AB=0.985;AC=34;AF=0.607;AN=56;BaseQRankSum=-6.101;DP=588;FS=2.852;HRun=0;HaplotypeScore=158.5795;InbreedingCoeff=-0.2034;MQ=50.71;MQ0=20;MQRankSum=-1.513;QD=9.46;ReadPosRankSum=-6.148;VQSLOD=1.6946;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:25:43.06:356,43,0	1/1:9,0:9:8.76:73,9,0	0/0:42,0:12:32.95:0,33,256	0/0:48,0:14:17.67:0,18,130	0/1:29,0:27:51.26:237,0,51	0/1:24,0:24:99:111,0,427	0/1:21,0:19:51.61:52,0,344	1/1:26,0:26:54.76:455,55,0	0/1:17,0:17:23.88:24,0,336	0/1:23,0:23:99:221,0,287	0/0:13,0:13:2.84:0,3,14	0/1:25,0:24:38.75:39,0,476	0/1:15,1:16:2.02:117,0,2	0/1:25,0:25:99:185,0,149	0/1:19,0:18:17.87:18,0,906	1/1:21,0:20:49.46:412,49,0	0/1:26,0:26:99:189,0,271	0/1:9,1:10:24.62:138,0,25	1/1:16,0:14:18.39:283,18,0	1/1:20,2:22:39.76:397,40,0	1/1:13,0:13:17.90:119,18,0	1/1:6,0:6:1.79:4,2,0	0/1:14,0:14:94.20:94,0,110	0/1:15,0:14:44.35:44,0,561	1/1:27,0:27:3.66:262,4,0	0/1:28,1:28:24.26:439,0,24	0/1:17,1:18:4.36:227,0,4	0/1:8,0:8:1.02:96,0,1
chr10	33190404	.	AGAGAGG	A	6642.48	PASS	AB=1.000;AC=40;AF=0.714;AN=56;BaseQRankSum=-6.547;DP=585;FS=0.000;HRun=0;HaplotypeScore=138.1946;InbreedingCoeff=0.0735;MQ=52.29;MQ0=17;MQRankSum=-2.557;QD=13.78;ReadPosRankSum=-4.540;VQSLOD=2.7084;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:24:48.86:486,49,0	1/1:1,7:8:8.81:206,9,0	0/0:42,0:14:38.43:0,38,298	0/0:41,0:14:17.20:0,17,129	0/1:29,0:27:32.62:258,0,33	0/1:23,0:23:99:123,0,304	0/1:20,0:18:77.39:77,0,250	1/1:28,0:28:56.42:503,56,0	0/1:18,0:18:67.78:68,0,205	0/1:23,0:23:43.91:356,0,44	1/1:14,0:14:2.74:12,3,0	0/1:26,0:25:59.10:59,0,319	1/1:15,2:17:11.78:198,12,0	0/1:26,0:26:42.07:210,0,42	0/0:19,0:18:14.22:0,14,712	1/1:15,6:20:53.81:723,54,0	0/1:26,0:26:99:235,0,173	1/1:10,0:10:3.34:179,3,0	1/1:12,2:13:36.93:454,37,0	1/1:21,2:23:42.97:414,43,0	1/1:13,0:13:26.84:232,27,0	1/1:7,0:7:0.47:1,0,0	0/1:14,0:14:25.51:98,0,26	0/1:15,0:14:44.36:44,0,394	1/1:24,1:25:43.09:397,43,0	1/1:28,2:29:53.85:777,54,0	1/1:19,0:19:41.95:394,42,0	1/1:8,0:8:17.92:138,18,0
chr10	33190406	.	AGAGG	A	6429	PASS	AB=0.994;AC=43;AF=0.768;AN=56;BaseQRankSum=-4.945;DP=583;FS=1.690;HRun=0;HaplotypeScore=125.0304;InbreedingCoeff=0.2420;MQ=52.58;MQ0=17;MQRankSum=-2.602;QD=13.39;ReadPosRankSum=-3.039;VQSLOD=3.7145;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:25:48.43:418,48,0	1/1:8,0:8:8.79:109,9,0	0/0:42,0:15:40.99:0,41,320	0/0:41,0:13:17.20:0,17,129	0/1:30,0:28:7.84:280,0,8	0/1:22,1:23:99:167,0,160	0/1:20,0:18:78.36:78,0,104	1/1:27,0:27:58.17:559,58,0	0/1:17,0:17:69:69,0,94	1/1:24,0:24:43.25:470,43,0	1/1:1,13:14:3.01:56,3,0	0/1:25,0:24:99:103,0,162	1/1:3,14:17:12.03:164,12,0	1/1:27,0:27:17.58:250,18,0	0/0:20,0:19:10.69:0,11,519	1/1:20,1:20:53.92:510,54,0	0/1:27,0:27:56.02:275,0,56	1/1:10,0:10:10.25:186,10,0	1/1:12,1:12:35.99:352,36,0	1/1:22,0:22:43.32:354,43,0	1/1:13,0:13:26.73:202,27,0	1/1:7,0:7:5.99:51,6,0	1/1:14,0:14:16.29:121,16,0	0/1:16,0:15:65.93:66,0,198	1/1:25,0:25:47.86:400,48,0	1/1:28,0:27:77.96:685,78,0	1/1:18,0:18:41.95:366,42,0	1/1:8,0:8:17.92:138,18,0
chr10	33190408	.	AGG	A	6572.07	PASS	AB=1.000;AC=46;AF=0.821;AN=56;BaseQRankSum=-4.297;DP=578;FS=0.565;HRun=3;HaplotypeScore=110.8475;InbreedingCoeff=0.4261;MQ=53.12;MQ0=15;MQRankSum=-2.072;QD=13.66;ReadPosRankSum=-2.118;VQSLOD=1.0894;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:24,1:24:47.90:390,48,0	1/1:7,0:7:8.95:67,9,0	0/0:41,0:16:43.80:0,44,350	0/0:36,0:13:16.64:0,17,122	1/1:28,0:26:23.12:304,23,0	1/1:23,0:23:9.16:165,9,0	0/1:21,0:19:29.95:150,0,30	1/1:26,0:26:56.13:555,56,0	0/1:16,0:16:10.37:75,0,10	1/1:20,3:23:62.96:600,63,0	1/1:13,0:13:2.99:24,3,0	0/1:24,0:23:9.47:135,0,9	1/1:17,0:17:11.96:95,12,0	1/1:26,0:26:10.67:263,11,0	0/0:20,0:19:21.53:0,22,385	1/1:23,0:22:50.85:446,51,0	1/1:27,0:27:3.36:279,3,0	1/1:10,0:10:29.78:223,30,0	1/1:14,1:14:41.96:366,42,0	1/1:22,0:22:42.95:312,43,0	1/1:13,0:13:26.83:230,27,0	1/1:7,0:7:5.95:50,6,0	1/1:15,1:16:21.31:190,21,0	0/1:16,0:15:57.26:90,0,57	1/1:25,1:26:50.81:405,51,0	1/1:29,0:28:83.66:696,84,0	1/1:19,1:20:41.14:324,41,0	1/1:8,0:8:17.92:138,18,0
chr10	33192365	.	GA	G	406.37	PASS	AB=0.538;AC=15;AF=0.938;AN=16;BaseQRankSum=-1.576;DP=117;FS=0.000;HRun=10;HaplotypeScore=13.5256;MQ=15.32;MQ0=85;MQRankSum=0.473;QD=9.68;ReadPosRankSum=1.576;VQSLOD=0.0840;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	1/1:1,1:1:3:26,3,0	./.	./.	0/1:1,0:6:1.25:9,0,1	./.	./.	./.	./.	1/1:2,2:2:6:52,6,0	1/1:0,6:5:15:130,15,0	./.	./.	./.	./.	./.	./.	./.	./.	1/1:3,4:5:8.99:78,9,0	./.	1/1:1,2:1:3:26,3,0	./.	./.	1/1:0,7:7:12:104,12,0	1/1:2,4:2:6:52,6,0	./.	./.
chr10	33192447	.	C	CA	875.97	PASS	AB=0.656;AC=21;AF=0.808;AN=26;BaseQRankSum=-2.380;DP=171;FS=0.000;HRun=13;HaplotypeScore=33.0852;InbreedingCoeff=0.1846;MQ=23.08;MQ0=75;MQRankSum=-0.197;QD=8.04;ReadPosRankSum=0.708;VQSLOD=1.2073;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	1/1:0,2:2:6.01:56,6,0	./.	./.	0/1:8,6:13:4.72:89,0,5	1/1:4,2:3:3:28,3,0	./.	./.	./.	1/1:2,2:3:5.99:50,6,0	1/1:6,5:12:16.06:154,16,0	./.	./.	./.	./.	0/1:2,4:2:0:0,0,0	./.	./.	./.	1/1:5,8:14:9.38:153,9,0	./.	0/0:4,3:7:5.92:0,6,41	1/1:5,0:7:3.33:51,3,0	./.	1/1:5,9:17:17.49:177,17,0	1/1:4,1:2:3:28,3,0	1/1:0,12:8:14.80:139,15,0	0/1:3,3:4:11.43:47,0,11
chr10	33193177	.	TAC	T	475.99	PASS	AB=0.839;AC=7;AF=0.135;AN=52;BaseQRankSum=-1.160;DP=497;FS=3.003;HRun=0;HaplotypeScore=86.9466;InbreedingCoeff=0.3045;MQ=64.85;MQ0=5;MQRankSum=1.114;QD=4.81;ReadPosRankSum=0.561;VQSLOD=2.6796;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:15:0,15,159	0/0:10,0:10:15.04:0,15,175	./.	./.	0/0:21,0:21:3:0,3,25	0/0:17,0:17:3:0,3,25	0/0:13,0:14:8.99:0,9,74	0/0:30,0:30:3.90:0,4,38	0/0:13,0:13:14.98:0,15,123	0/0:21,0:21:27.88:0,28,384	0/0:11,0:11:12.04:0,12,146	1/1:11,3:14:9.02:97,9,0	0/0:18,0:18:32.98:0,33,328	1/1:10,8:19:26.90:273,27,0	0/0:15,0:15:9.03:0,9,133	0/0:14,0:14:5.98:0,6,46	0/0:16,0:16:3:0,3,25	0/0:16,0:16:8.97:0,9,69	0/0:17,0:16:11.99:0,12,116	0/0:20,0:20:23.96:0,24,212	0/0:21,0:20:11.98:0,12,104	0/0:12,0:11:9:0,9,91	0/1:11,4:15:24.95:56,0,25	0/1:15,9:24:13.82:173,0,14	0/0:13,0:13:14.97:0,15,136	0/0:24,0:24:18.61:0,19,450	0/1:27,0:26:8.34:8,0,141	0/0:16,0:16:17.93:0,18,139
chr10	33193213	.	C	CCAT	825.22	PASS	AB=0.677;AC=23;AF=0.411;AN=56;BaseQRankSum=7.178;DP=527;FS=0.485;HRun=0;HaplotypeScore=105.0717;InbreedingCoeff=0.0297;MQ=55.73;MQ0=13;MQRankSum=-0.152;QD=2.44;ReadPosRankSum=3.478;VQSLOD=1.6495;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:25:22.65:23,0,298	0/0:9,0:9:20.92:0,21,187	0/0:12,0:7:21.06:0,21,352	0/0:9,0:7:21.07:0,21,374	1/1:9,0:22:18.19:119,18,0	0/1:7,1:25:18.70:19,0,137	1/1:2,0:16:8.94:79,9,0	0/0:33,0:32:56.74:0,57,498	1/1:0,0:13:15.04:157,15,0	0/0:23,0:24:23.52:0,24,460	0/0:17,0:17:43.09:0,43,286	0/1:15,0:15:5.38:5,0,213	0/1:14,0:18:60.75:61,0,246	0/0:20,0:20:20.19:0,20,251	0/0:17,0:17:35.81:0,36,750	1/1:0,0:14:5.91:37,6,0	0/1:16,0:17:19.65:20,0,160	0/1:2,0:14:10.79:44,0,11	0/1:2,0:12:15.69:16,0,150	0/1:4,0:21:45.63:72,0,46	0/1:6,0:25:30.88:31,0,116	0/1:4,0:14:20.08:20,0,68	0/0:18,0:18:37.18:0,37,282	0/0:30,0:30:37.38:0,37,348	0/1:2,0:17:38.20:60,0,38	0/1:10,0:26:42.65:43,0,405	0/1:6,0:20:45.03:93,0,45	1/1:0,0:14:17.72:111,18,0
chr10	33198103	.	CGTGTGTGT	C	1967.69	PASS	AB=0.707;AC=7;AF=0.125;AN=56;BaseQRankSum=-0.444;DP=530;FS=3.722;HRun=0;HaplotypeScore=152.6400;InbreedingCoeff=0.3785;MQ=51.20;MQ0=10;MQRankSum=-6.751;QD=19.48;ReadPosRankSum=3.945;VQSLOD=2.7247;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:29:12.04:0,12,344	0/0:1,0:4:6.02:0,6,140	0/0:17,0:9:3.01:0,3,60	0/0:19,0:13:2.99:0,3,23	1/1:8,18:27:27.09:633,27,0	1/1:11,11:22:21.07:534,21,0	0/1:7,4:11:28.58:144,0,29	0/0:25,0:22:32.90:0,33,647	0/1:9,13:21:33.08:581,0,33	0/0:9,0:19:42.02:0,42,780	0/0:11,0:19:27.08:0,27,588	0/0:8,0:19:18.48:0,18,632	0/0:14,0:14:18.04:0,18,370	0/0:10,0:19:33.11:0,33,1005	0/0:20,0:21:51.01:0,51,1899	0/0:12,0:20:20.80:0,21,684	0/1:13,6:19:99:216,0,101	0/0:14,0:13:17.93:0,18,261	0/0:16,0:24:39.13:0,39,953	0/0:8,0:15:18.06:0,18,447	0/0:16,0:19:17.99:0,18,446	0/0:6,0:5:3.01:0,3,106	0/0:5,0:14:21.07:0,21,732	0/0:12,0:23:39.12:0,39,1193	0/0:12,0:29:15.05:0,15,488	0/0:18,0:29:54.61:0,55,1096	0/0:7,0:20:24.50:0,25,654	0/0:8,0:8:11.71:0,12,241
chr10	33199993	.	C	CAAAAAA	9428.76	PASS	AB=1.000;AC=43;AF=0.768;AN=56;BaseQRankSum=-6.346;DP=432;FS=6.859;HRun=13;HaplotypeScore=103.0635;InbreedingCoeff=0.6949;MQ=67.03;MQ0=1;MQRankSum=-6.891;QD=27.73;ReadPosRankSum=-2.655;VQSLOD=2.6503;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:16:20.38:91,20,0	1/1:14,0:14:29.31:513,29,0	0/0:15,0:13:7.69:0,8,208	0/0:14,0:10:0.89:0,1,29	1/1:30,1:31:55.15:1082,55,0	1/1:18,1:19:23.11:577,23,0	1/1:5,0:5:3.01:77,3,0	1/1:29,0:29:35.42:576,35,0	1/1:11,0:11:15.05:304,15,0	1/1:13,1:14:28.27:592,28,0	1/1:24,0:24:54.06:1055,54,0	0/0:11,0:11:8.34:0,8,40	1/1:13,0:13:11.40:249,11,0	0/0:19,0:19:26.03:0,26,105	0/0:17,0:19:35.49:0,35,574	1/1:12,0:12:11.99:178,12,0	1/1:10,1:11:18.06:503,18,0	1/1:8,0:7:6.02:124,6,0	1/1:12,0:13:4.87:349,5,0	1/1:22,0:23:51.46:983,51,0	1/1:1,0:1:3.01:56,3,0	1/1:13,0:13:20.10:452,20,0	0/1:22,0:22:15.07:15,0,90	0/0:12,0:12:15.67:0,16,77	1/1:17,0:17:21.83:420,22,0	1/1:17,1:18:29.42:584,29,0	1/1:15,0:16:20.43:443,20,0	1/1:9,1:10:9.03:205,9,0
chr10	33200003	.	A	AAAAAAG	16362.62	PASS	AB=1.000;AC=51;AF=0.911;AN=56;BaseQRankSum=-2.057;DP=546;FS=0.000;HRun=0;HaplotypeScore=121.4182;InbreedingCoeff=0.7556;MQ=63.66;MQ0=1;MQRankSum=-2.723;QD=32.27;ReadPosRankSum=-0.451;VQSLOD=4.1269;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,0:20:29.89:243,30,0	1/1:2,6:16:36.11:807,36,0	0/0:19,0:16:25.85:0,26,348	0/1:11,0:6:0.21:0,0,67	1/1:7,14:26:58.18:1460,58,0	1/1:6,12:21:30.03:802,30,0	1/1:3,9:13:12.03:271,12,0	1/1:18,4:47:79.63:2070,80,0	1/1:3,9:17:18.05:395,18,0	1/1:4,11:22:51.07:1103,51,0	1/1:3,19:28:63.04:1385,63,0	1/1:1,0:11:10.44:34,10,0	1/1:6,21:29:8.77:350,9,0	1/1:0,0:18:22.90:74,23,0	0/0:20,0:20:51.09:0,51,860	1/1:3,1:13:18.02:346,18,0	1/1:4,12:16:27.09:790,27,0	1/1:6,0:6:14.85:212,15,0	1/1:5,11:21:58.83:1095,59,0	1/1:5,19:30:76.75:1506,77,0	1/1:2,0:2:5.87:40,6,0	1/1:3,8:17:25.22:623,25,0	1/1:0,0:20:37.33:185,37,0	1/1:1,0:12:4.85:29,5,0	1/1:5,16:27:30.10:781,30,0	1/1:6,14:22:38.57:887,39,0	1/1:3,23:33:18.13:558,18,0	1/1:4,0:8:12.04:314,12,0
chr10	33201059	.	TTGTGTGTG	T	867.49	PASS	AB=0.925;AC=20;AF=0.385;AN=52;BaseQRankSum=3.210;DP=571;FS=3.895;HRun=0;HaplotypeScore=140.5121;InbreedingCoeff=0.4654;MQ=72.49;MQ0=12;MQRankSum=-3.389;QD=4.71;ReadPosRankSum=0.084;VQSLOD=2.6096;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:6.02:0,6,145	1/1:12,0:12:3.48:46,3,0	./.	./.	0/0:16,0:15:2.96:0,3,99	0/0:30,0:30:42.14:0,42,1320	0/0:20,0:20:12.51:0,13,354	0/0:20,0:19:0:0,0,0	0/0:21,0:21:21.54:0,22,554	0/1:29,1:29:65.12:65,0,96	1/1:12,1:13:9:123,9,0	0/0:11,0:16:9.03:0,9,151	1/1:12,2:14:6.02:148,6,0	0/0:22,0:22:15.03:0,15,277	0/0:18,0:17:9.03:0,9,315	1/1:18,9:28:11.44:277,11,0	0/0:22,0:22:15.05:0,15,498	1/1:14,1:14:0.58:70,1,0	0/0:19,0:19:2.19:0,2,5	0/1:13,2:15:34.37:85,0,34	0/0:27,0:26:3.01:0,3,88	1/1:11,0:11:3:25,3,0	0/0:18,0:18:15.05:0,15,381	0/0:26,0:35:21.07:0,21,473	1/1:17,3:20:3.01:74,3,0	0/0:17,0:17:0.47:0,0,1	1/1:15,0:13:3.01:56,3,0	1/1:7,0:9:2.86:56,3,0
chr10	33201108	.	T	TGTGG	1357.91	PASS	AB=0.766;AC=10;AF=0.179;AN=56;BaseQRankSum=-4.125;DP=534;FS=6.390;HRun=0;HaplotypeScore=110.8172;InbreedingCoeff=0.7410;MQ=63.68;MQ0=17;MQRankSum=1.347;QD=11.41;ReadPosRankSum=-1.079;VQSLOD=2.5796;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:44.87:0,45,370	0/0:7,0:7:14.98:0,15,123	0/0:21,0:15:45.09:0,45,481	0/0:21,0:17:51.09:0,51,546	1/1:3,0:19:26.43:174,26,0	1/1:23,0:23:32.41:526,32,0	1/1:16,0:16:35.85:305,36,0	0/0:25,0:24:69.44:0,69,615	1/1:10,21:33:12.47:262,12,0	0/0:20,0:19:53.81:0,54,484	0/0:17,0:16:41.80:0,42,338	0/0:18,0:18:32.96:0,33,282	0/0:17,0:16:35.73:0,36,297	0/0:15,0:15:27.43:0,27,224	0/0:14,0:13:18.89:0,19,198	0/0:23,0:22:39.43:0,39,364	0/1:2,15:17:12.84:230,0,13	0/0:12,0:9:9.70:0,10,132	0/0:16,0:16:48.01:0,48,428	0/0:19,0:19:56.89:0,57,476	0/0:20,0:19:41.92:0,42,347	0/0:18,0:18:34.16:0,34,266	0/0:26,0:26:60.80:0,61,496	0/0:30,0:29:50.94:0,51,451	0/0:16,0:16:38.92:0,39,332	0/0:25,0:24:69.48:0,69,620	0/0:13,0:12:33.10:0,33,266	0/1:9,0:8:27.92:28,0,46
chr10	33203453	.	G	GTT	11948.79	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-9.126;DP=526;FS=7.147;HRun=10;HaplotypeScore=59.3353;InbreedingCoeff=0.9566;MQ=71.80;MQ0=2;MQRankSum=-1.676;QD=32.03;ReadPosRankSum=-1.203;VQSLOD=4.6138;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,0:15:27.32:96,27,0	1/1:1,11:13:36.12:520,36,0	0/0:12,0:11:25.24:0,25,245	0/0:4,0:5:4.22:0,4,34	0/0:32,0:35:68.63:0,69,794	0/0:27,0:27:63.08:0,63,641	0/0:12,0:13:29.78:0,30,279	1/1:7,24:32:75.19:1031,75,0	0/0:17,0:17:48.10:0,48,488	1/1:3,16:20:48.11:654,48,0	1/1:3,17:21:49.81:621,50,0	1/1:0,10:10:30.06:422,30,0	1/1:3,16:19:36.12:538,36,0	1/1:4,13:17:33.11:490,33,0	0/0:19,0:19:48.05:0,48,480	1/1:3,16:20:51.17:744,51,0	0/0:25,0:25:60.09:0,60,610	1/1:0,6:7:15.05:220,15,0	1/1:4,17:23:56.64:775,57,0	1/1:2,33:37:99:1397,99,0	1/1:1,9:10:24.08:358,24,0	1/1:0,2:3:9.02:118,9,0	1/1:1,15:16:42.10:601,42,0	1/1:0,9:9:21.07:313,21,0	1/1:4,26:33:72.22:1025,72,0	1/1:2,21:24:65.66:854,66,0	1/1:3,29:33:68.72:993,69,0	1/1:4,7:9:12.04:179,12,0
chr10	33205353	.	G	GT	3158.45	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-2.643;DP=655;FS=0.437;HRun=3;HaplotypeScore=65.9796;InbreedingCoeff=0.9837;MQ=66.57;MQ0=2;MQRankSum=-0.775;QD=36.30;ReadPosRankSum=1.724;VQSLOD=4.2178;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,126,1464	0/0:10,0:10:27.08:0,27,324	0/0:18,1:18:45.11:0,45,509	0/0:22,0:21:60.17:0,60,698	0/0:17,0:17:51.16:0,51,612	0/0:29,0:29:84.26:0,84,1007	0/0:31,0:31:89.94:0,90,1024	0/0:29,0:29:84.25:0,84,998	0/0:19,0:19:57.17:0,57,684	0/0:27,0:27:75.23:0,75,900	0/0:27,0:27:78.22:0,78,920	1/1:0,22:22:57.19:798,57,0	0/0:24,0:24:69.20:0,69,816	1/1:1,25:26:75.25:1050,75,0	0/0:27,0:27:75.17:0,75,871	0/0:29,0:29:81.25:0,81,972	0/0:19,0:19:57.16:0,57,671	0/0:21,0:21:60.18:0,60,720	0/0:20,0:17:39.12:0,39,467	0/0:19,0:19:57.16:0,57,671	0/0:29,0:29:81.19:0,81,926	0/0:17,0:17:48.15:0,48,576	1/1:0,21:21:63.21:882,63,0	1/1:4,14:18:42.14:588,42,0	0/0:29,0:29:78.20:0,78,903	0/0:26,0:26:75.23:0,75,899	0/0:33,0:33:96.28:0,96,1141	0/0:3,0:3:9.03:0,9,108
chr10	33205650	.	G	GCT	2768.22	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-9.150;DP=513;FS=11.605;HRun=0;HaplotypeScore=65.3817;InbreedingCoeff=0.9688;MQ=95.35;MQ0=2;MQRankSum=-2.405;QD=30.42;ReadPosRankSum=3.017;VQSLOD=5.0997;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:27.07:0,27,328	0/0:6,0:6:18.06:0,18,227	0/0:25,0:25:7.97:0,8,522	0/0:30,0:30:57.13:0,57,681	1/1:2,18:20:45.15:748,45,0	1/1:3,6:10:12.04:199,12,0	1/1:4,12:16:36.12:594,36,0	0/0:31,0:31:60.16:0,60,723	1/1:2,16:17:30.10:497,30,0	0/0:22,0:22:57.17:0,57,708	0/0:20,0:20:42.13:0,42,530	0/0:12,0:12:27.09:0,27,341	0/0:15,0:15:36.11:0,36,452	0/0:25,0:25:66.21:0,66,832	0/0:30,0:30:84.26:0,84,1047	0/0:16,0:16:42.13:0,42,530	1/1:6,19:25:22.34:902,22,0	0/0:14,0:14:36.95:0,37,425	0/0:15,0:15:33.10:0,33,416	0/0:23,0:23:51.16:0,51,642	0/0:12,0:12:36.12:0,36,454	0/0:7,0:7:15.05:0,15,189	0/0:10,0:10:24.08:0,24,302	0/0:20,0:20:51.16:0,51,640	0/0:21,0:21:54.17:0,54,682	0/0:12,0:12:33.10:0,33,404	0/0:31,0:31:81.26:0,81,1022	0/0:14,0:14:36.11:0,36,453
chr10	33206351	.	C	CT	1236.20	PASS	AB=0.859;AC=25;AF=0.463;AN=54;BaseQRankSum=4.416;DP=314;FS=3.265;HRun=13;HaplotypeScore=53.1956;InbreedingCoeff=0.4640;MQ=70.96;MQ0=0;MQRankSum=-0.921;QD=6.91;ReadPosRankSum=-0.670;VQSLOD=1.9784;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:11:13.45:0,13,39	0/0:6,0:6:17.86:0,18,123	0/0:10,0:6:0.50:0,0,15	0/0:11,0:9:4.14:0,4,15	1/1:6,2:11:21.86:121,22,0	1/1:9,0:15:5.38:89,5,0	1/1:4,0:6:2.84:14,3,0	0/1:22,3:25:29.56:30,0,237	1/1:8,0:12:15.11:98,15,0	0/0:8,0:11:14.96:0,15,79	0/1:11,2:14:23.93:24,0,138	0/1:5,2:7:8.58:67,0,9	0/0:13,0:13:20.78:0,21,144	1/1:4,3:8:14.84:122,15,0	0/0:12,0:12:17.78:0,18,123	0/1:6,1:7:11.72:12,0,69	1/1:13,0:20:46.76:282,47,0	0/0:6,0:8:15.96:0,16,94	0/1:12,2:14:22.99:23,0,150	0/0:17,0:17:23.43:0,23,164	./.	0/0:8,0:8:17.31:0,17,119	1/1:8,2:10:8.95:71,9,0	1/1:1,1:2:3:28,3,0	0/0:9,0:9:23.80:0,24,164	1/1:2,12:16:15.13:259,15,0	0/0:15,0:17:28.70:0,29,191	1/1:2,8:12:2.44:183,2,0
chr10	33206384	.	GTT	G	1150.61	PASS	AC=8;AF=0.154;AN=52;BaseQRankSum=4.170;DP=254;FS=5.047;HRun=9;HaplotypeScore=47.9704;InbreedingCoeff=0.8272;MQ=75.29;MQ0=2;MQRankSum=-3.976;QD=23.48;ReadPosRankSum=2.972;VQSLOD=2.4129;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:21.06:0,21,320	0/0:8,0:8:24.07:0,24,370	0/0:9,0:5:4.48:0,4,21	0/0:16,0:12:20.03:0,20,252	1/1:2,15:17:48.13:549,48,0	1/1:2,10:12:30.09:348,30,0	./.	0/0:16,0:16:36.12:0,36,590	1/1:2,3:5:9.03:105,9,0	0/0:12,0:12:30.09:0,30,450	0/0:12,0:12:27.09:0,27,438	0/0:0,0:6:14.97:0,15,53	0/0:11,0:11:15.05:0,15,246	0/0:1,0:5:10.23:0,10,39	0/0:4,0:4:12.04:0,12,196	0/0:4,0:4:9.03:0,9,148	1/1:7,8:14:27.04:300,27,0	0/0:7,0:7:18.04:0,18,270	0/0:11,0:11:30.10:0,30,492	0/0:12,0:12:36.12:0,36,589	./.	0/0:4,0:4:6.02:0,6,98	0/0:0,0:7:14.97:0,15,53	0/0:0,0:2:2.50:0,2,9	0/0:7,0:7:18.06:0,18,294	0/0:18,0:18:51.17:0,51,810	0/0:15,0:15:39.12:0,39,599	0/0:10,0:10:27.09:0,27,434
chr10	33206456	.	TA	T	110.84	PASS	AB=0.875;AC=12;AF=0.353;AN=34;BaseQRankSum=1.596;DP=59;FS=2.764;HRun=1;HaplotypeScore=14.4558;InbreedingCoeff=0.3290;MQ=69.74;MQ0=2;MQRankSum=-2.719;QD=5.54;ReadPosRankSum=-1.461;VQSLOD=0.0085;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:2,1:3:1.81:18,0,2	0/1:2,0:2:1.44:1,0,4	./.	0/0:3,0:2:2.97:0,3,20	1/1:1,4:4:6.01:68,6,0	1/1:0,2:1:2.97:20,3,0	1/1:0,2:2:3.01:40,3,0	0/0:9,0:8:0.66:0,1,35	1/1:1,2:3:6.01:63,6,0	./.	1/1:3,0:2:2.37:8,2,0	0/0:1,0:1:2.37:0,2,8	0/0:3,0:3:2.37:0,2,8	./.	0/0:1,0:1:2.37:0,2,8	./.	./.	0/0:3,0:3:4.07:0,4,12	0/0:2,0:2:1.95:0,2,41	./.	./.	./.	./.	./.	./.	0/0:4,0:3:8.79:0,9,64	0/0:3,0:3:0.93:0,1,4	0/0:3,0:3:6.81:0,7,22
chr10	33206458	.	TG	T	1123.95	PASS	AC=30;AF=0.938;AN=32;BaseQRankSum=-1.733;DP=56;FS=10.280;HRun=1;HaplotypeScore=9.4330;InbreedingCoeff=0.1152;MQ=70.92;MQ0=2;MQRankSum=-1.733;QD=25.54;ReadPosRankSum=-1.083;VQSLOD=1.6452;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,2:3:5.99:63,6,0	1/1:0,2:2:6.02:84,6,0	./.	0/0:3,0:2:2.95:0,3,19	1/1:5,0:4:6.01:64,6,0	./.	1/1:2,0:2:3.01:38,3,0	1/1:0,8:7:21.07:293,21,0	1/1:2,0:2:3.01:36,3,0	./.	1/1:0,3:2:3.01:42,3,0	1/1:1,0:1:3.01:42,3,0	1/1:0,3:3:3.01:42,3,0	./.	1/1:1,0:1:3.01:42,3,0	./.	./.	1/1:0,3:3:6.02:84,6,0	1/1:0,1:1:3.01:42,3,0	./.	./.	./.	./.	./.	./.	1/1:0,4:3:9.01:94,9,0	1/1:0,3:3:9.03:119,9,0	1/1:0,3:3:9.03:126,9,0
chr10	33209169	.	GATA	G	141.70	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.203;DP=392;FS=4.100;HRun=0;HaplotypeScore=60.8620;InbreedingCoeff=0.8820;MQ=82.55;MQ0=0;MQRankSum=-1.695;QD=23.62;ReadPosRankSum=-0.062;VQSLOD=3.1746;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,5:6:15:230,15,0	0/0:3,0:3:9.03:0,9,212	0/0:17,0:17:51.18:0,51,1203	0/0:16,0:15:48.16:0,48,1110	0/0:28,0:28:72.16:0,72,1588	0/0:15,0:15:45.15:0,45,1030	0/0:9,0:9:24.08:0,24,566	0/0:38,0:38:99:0,108,2475	0/0:14,0:14:42.14:0,42,991	0/0:14,0:14:42.14:0,42,965	0/0:15,0:15:42.14:0,42,991	0/0:12,0:12:36.12:0,36,849	0/0:9,0:9:27.09:0,27,637	0/0:6,0:6:18.06:0,18,424	0/0:14,0:14:42.11:0,42,908	0/0:10,0:10:30.10:0,30,706	0/0:7,0:7:21.07:0,21,488	0/0:10,0:10:27.09:0,27,607	0/0:14,0:14:39.13:0,39,920	0/0:23,0:23:66.23:0,66,1524	0/0:8,0:8:21.07:0,21,496	0/0:21,0:21:63.10:0,63,1335	0/0:17,0:17:48.13:0,48,1049	0/0:5,0:5:12.04:0,12,284	0/0:18,0:18:51.17:0,51,1137	0/0:16,0:16:45.15:0,45,1064	0/0:19,0:19:57.20:0,57,1344	0/0:8,0:8:21.54:0,22,488
chr10	33209496	.	T	TA	9110.28	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-15.047;DP=605;FS=5.550;HRun=8;HaplotypeScore=52.9969;InbreedingCoeff=0.9723;MQ=67.14;MQ0=0;MQRankSum=-1.281;QD=28.56;ReadPosRankSum=-0.275;VQSLOD=5.1501;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,105,960	1/1:0,7:7:15.04:173,15,0	0/0:11,0:11:24:0,24,217	0/0:6,0:6:18.01:0,18,164	0/0:38,0:38:99:0,99,905	0/0:22,0:22:63.01:0,63,571	0/0:13,0:13:30.01:0,30,274	1/1:3,39:42:99:1359,120,0	0/0:25,0:25:72.03:0,72,656	1/1:2,23:25:69.17:774,69,0	1/1:1,17:18:45.13:519,45,0	0/0:27,0:27:75.01:0,75,678	1/1:2,20:22:42.12:485,42,0	0/0:24,0:24:72.03:0,72,655	0/0:25,0:25:69.02:0,69,626	1/1:2,20:22:57.17:658,57,0	0/0:19,0:19:57.02:0,57,518	1/1:1,12:13:36.11:415,36,0	1/1:2,9:11:27.07:301,27,0	1/1:6,25:32:75.10:833,75,0	1/1:0,15:16:35.94:395,36,0	1/1:4,17:21:51.15:587,51,0	0/0:24,0:24:62.95:0,63,565	0/0:17,0:17:51.01:0,51,462	1/1:2,25:28:65.25:790,65,0	1/1:1,22:23:66.15:747,66,0	1/1:5,33:38:90.27:1039,90,0	1/1:0,1:1:3.01:35,3,0
chr10	33214262	.	A	AG	15938.44	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=8.776;DP=536;FS=2.776;HRun=1;HaplotypeScore=74.7340;InbreedingCoeff=0.9943;MQ=88.27;MQ0=0;MQRankSum=-4.140;QD=41.18;ReadPosRankSum=1.089;VQSLOD=5.4720;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:93.30:0,93,1205	1/1:0,8:8:24.08:360,24,0	0/0:22,0:22:63.15:0,63,784	0/0:18,0:18:48.11:0,48,579	1/1:2,12:14:36.08:514,36,0	1/1:0,16:16:48.16:719,48,0	1/1:0,18:18:42.14:629,42,0	1/1:3,33:36:99:1523,105,0	1/1:0,12:12:36.12:537,36,0	1/1:0,20:20:60.19:879,60,0	1/1:1,16:17:48.08:691,48,0	0/0:14,0:14:42.14:0,42,545	1/1:0,29:29:81.27:1213,81,0	0/0:13,0:13:39.13:0,39,506	0/0:16,0:16:48.15:0,48,611	1/1:0,18:18:54.18:808,54,0	1/1:0,38:38:99:1480,99,0	1/1:0,11:11:27.09:404,27,0	1/1:2,27:29:81.22:1167,81,0	1/1:2,23:25:66.14:961,66,0	1/1:0,17:17:51.17:764,51,0	1/1:0,18:18:45.15:673,45,0	0/0:14,0:14:42.12:0,42,531	0/0:20,0:20:60.19:0,60,778	1/1:0,14:14:42.14:629,42,0	1/1:2,18:20:60.12:869,60,0	1/1:1,20:21:63.21:937,63,0	1/1:0,6:6:12.04:180,12,0
chr10	33214724	.	T	TGG	2721.81	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-0.963;DP=609;FS=7.539;HRun=7;HaplotypeScore=88.9199;InbreedingCoeff=0.9885;MQ=93.43;MQ0=0;MQRankSum=-1.911;QD=34.90;ReadPosRankSum=0.666;VQSLOD=3.1089;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:72.21:0,72,839	0/0:9,0:9:24.07:0,24,280	0/0:34,0:34:74.29:0,74,886	0/0:23,0:22:38.50:0,39,405	0/0:29,0:29:75.21:0,75,874	0/0:20,0:20:42.10:0,42,489	0/0:8,0:8:18.05:0,18,210	0/0:28,0:28:66.16:0,66,761	0/0:23,0:23:60.15:0,60,686	0/0:21,0:21:51.14:0,51,594	0/0:21,0:21:54.12:0,54,617	1/1:2,21:24:60.20:982,60,0	0/0:24,0:24:66.18:0,66,757	1/1:2,14:18:42.14:687,42,0	0/0:22,0:22:60.15:0,60,686	0/0:25,0:25:69.19:0,69,793	0/0:21,0:21:57.13:0,57,640	0/0:15,0:15:42.08:0,42,473	0/0:19,0:19:51.13:0,51,584	0/0:35,0:35:99:0,99,1121	0/0:26,0:26:69.19:0,69,804	0/0:20,0:20:54.13:0,54,616	1/1:1,19:21:44.62:672,45,0	1/1:3,12:15:33.11:541,33,0	0/0:24,0:23:69.20:0,69,803	0/0:17,0:17:39.11:0,39,454	0/0:34,0:34:99:0,99,1139	0/0:7,0:7:12.01:0,12,140
chr10	33215919	.	G	GTACA	7882.07	PASS	AB=0.551;AC=9;AF=0.161;AN=56;BaseQRankSum=-9.615;DP=764;FS=0.000;HRun=0;HaplotypeScore=116.8323;InbreedingCoeff=0.9071;MQ=85.53;MQ0=0;MQRankSum=-1.961;QD=57.96;ReadPosRankSum=1.640;VQSLOD=6.4010;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:81.28:0,81,1455	0/0:10,0:10:30.10:0,30,524	0/0:23,0:23:51.13:0,51,885	0/0:26,0:26:48.23:0,48,976	1/1:1,26:29:66.22:1728,66,0	1/1:2,23:24:60.21:1581,60,0	1/1:7,22:30:66.23:1727,66,0	0/0:61,0:61:99:0,163,2844	1/1:0,23:25:63.22:1646,63,0	0/0:39,0:39:96.33:0,96,1764	0/0:27,0:27:69.23:0,69,1227	0/0:30,0:30:84.29:0,84,1534	0/0:26,0:26:72.25:0,72,1313	0/0:19,0:19:54.17:0,54,956	0/0:32,0:32:93.30:0,93,1666	0/0:20,0:20:57.20:0,57,1045	0/1:5,21:27:4.03:1200,0,4	0/0:18,0:18:48.12:0,48,783	0/0:21,0:21:57.18:0,57,1006	0/0:28,0:28:84.27:0,84,1503	0/0:53,0:53:99:0,157,2779	0/0:28,0:28:72.25:0,72,1311	0/0:25,0:25:69.24:0,69,1252	0/0:19,0:19:54.19:0,54,987	0/0:26,0:26:75.26:0,75,1380	0/0:31,0:31:87.30:0,87,1592	0/0:28,0:28:81.28:0,81,1490	0/0:9,0:9:27.08:0,27,467
chr10	33216702	.	T	TC	3923.12	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-11.715;DP=619;FS=12.934;HRun=6;HaplotypeScore=61.0373;InbreedingCoeff=0.9687;MQ=88.26;MQ0=0;MQRankSum=-0.781;QD=32.16;ReadPosRankSum=3.211;VQSLOD=3.0950;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,144,1461	0/0:7,0:7:21.05:0,21,214	0/0:27,0:27:60.04:0,60,581	0/0:18,0:18:38.85:0,39,342	1/1:0,29:29:81.26:1017,81,0	1/1:1,27:28:75.24:943,75,0	1/1:2,19:21:48.15:604,48,0	0/0:27,0:27:63.14:0,63,643	1/1:3,22:25:60.19:755,60,0	0/0:30,0:30:87.16:0,87,873	0/0:24,0:24:60.11:0,60,601	0/0:11,0:11:27.06:0,27,274	0/0:24,0:24:69.16:0,69,704	0/0:8,0:8:21.05:0,21,214	0/0:31,0:31:90.17:0,90,905	0/0:36,0:36:99:0,105,1064	1/1:0,19:19:48.15:604,48,0	0/0:10,0:10:30.07:0,30,306	0/0:15,0:15:39.08:0,39,389	0/0:19,0:19:48.10:0,48,484	0/0:21,0:21:60.12:0,60,605	0/0:27,0:27:78.17:0,78,795	0/0:12,0:12:13.84:0,14,281	0/0:3,0:3:6.01:0,6,61	0/0:21,0:21:63.14:0,63,642	0/0:32,0:32:96.20:0,96,970	0/0:34,0:34:99:0,102,1006	0/0:8,0:8:24.05:0,24,244
chr10	33217079	.	A	ACT	557.64	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-2.380;DP=621;FS=19.037;HRun=0;HaplotypeScore=121.4947;InbreedingCoeff=0.7256;MQ=80.31;MQ0=6;MQRankSum=-0.036;QD=20.65;ReadPosRankSum=-3.717;VQSLOD=1.6798;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,20:27:42.10:652,42,0	0/0:12,0:12:17.81:0,18,220	0/0:61,0:32:24.93:0,25,225	0/0:67,0:34:16.84:0,17,174	0/0:26,0:26:57.05:0,57,658	0/0:42,0:42:96.29:0,96,1160	0/0:15,0:15:33.08:0,33,389	0/0:27,0:27:54.10:0,54,615	0/0:17,0:17:42.13:0,42,513	0/0:18,0:18:41.49:0,41,484	0/0:9,0:10:11.87:0,12,124	0/0:21,0:21:24.04:0,24,266	0/0:22,0:21:21.96:0,22,289	0/0:23,0:23:28.68:0,29,353	0/0:26,0:26:60.19:0,60,731	0/0:18,0:18:29.66:0,30,349	0/0:17,0:17:48.15:0,48,586	0/0:6,0:6:9.03:0,9,110	0/0:17,0:17:24.07:0,24,293	0/0:24,0:24:51.16:0,51,618	0/0:9,0:9:18.02:0,18,194	0/0:12,0:12:12.51:0,13,147	0/0:14,0:15:18.06:0,18,216	0/0:12,0:12:11.99:0,12,128	0/0:26,0:26:35.68:0,36,400	0/0:22,0:22:60.19:0,60,733	0/0:21,0:21:33.08:0,33,386	0/0:6,0:6:3.01:0,3,37
chr10	33217096	.	GTC	G	560.57	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=6.282;DP=675;FS=2.562;HRun=0;HaplotypeScore=141.5511;InbreedingCoeff=0.8006;MQ=76.00;MQ0=15;MQRankSum=-1.397;QD=8.24;ReadPosRankSum=1.217;VQSLOD=3.1830;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:63.21:0,63,981	0/0:18,0:18:24.08:0,24,398	0/0:74,0:24:22.03:0,22,201	0/0:84,0:37:2.17:0,2,155	0/0:29,0:29:63.20:0,63,999	0/0:40,0:40:99:0,111,1706	0/0:15,0:15:42.09:0,42,632	0/0:31,0:31:63.15:0,63,931	0/0:20,0:20:59.97:0,60,874	0/0:23,1:24:27.56:0,28,908	0/0:9,0:9:8.80:0,9,88	1/1:1,21:22:21:245,21,0	0/0:22,0:21:27.07:0,27,404	1/1:3,16:19:23.34:269,23,0	0/0:23,0:23:57.18:0,57,906	0/0:24,0:24:32.99:0,33,448	0/0:19,0:19:48.16:0,48,797	0/0:8,0:8:12.04:0,12,201	0/0:13,0:12:30.10:0,30,476	0/0:25,1:26:3.53:0,4,545	0/0:10,0:10:24.07:0,24,349	0/0:14,0:14:14.56:0,15,223	1/1:2,14:16:11.97:136,12,0	1/1:2,9:11:5.98:58,6,0	0/0:21,0:21:27.08:0,27,428	0/0:25,0:25:54.02:0,54,1123	0/0:24,0:24:33.09:0,33,496	0/0:5,0:5:3.48:0,3,52
chr10	33217138	.	CTG	C	4345.72	PASS	AB=1.000;AC=31;AF=0.554;AN=56;BaseQRankSum=6.754;DP=556;FS=0.000;HRun=0;HaplotypeScore=128.0147;InbreedingCoeff=0.7862;MQ=49.64;MQ0=20;MQRankSum=0.012;QD=17.04;ReadPosRankSum=-1.793;VQSLOD=4.6085;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:34:79.01:0,79,1367	1/1:0,12:12:5.80:83,6,0	0/0:31,0:7:8.07:0,8,163	0/0:45,0:9:17.99:0,18,196	0/0:27,0:27:63.15:0,63,1073	0/0:43,0:43:99:0,114,2020	0/0:16,0:16:39.07:0,39,625	1/1:3,22:20:48.02:525,48,0	0/0:20,1:21:2.27:0,2,753	1/1:1,21:21:58.75:794,59,0	1/1:0,10:9:2.56:45,3,0	0/0:23,0:23:7.29:0,7,65	1/1:4,20:23:24.08:358,24,0	0/0:13,0:13:14.28:0,14,99	0/0:18,0:18:51.14:0,51,872	1/1:4,22:26:27.35:393,27,0	0/0:18,0:17:44.45:0,44,788	1/1:1,5:6:3.01:46,3,0	1/1:2,11:10:26.97:297,27,0	1/1:2,15:17:23.03:268,23,0	1/1:7,1:8:20.07:240,20,0	1/1:1,17:18:6.28:92,6,0	0/1:15,0:13:0:0,0,0	0/0:11,0:11:3:0,3,25	1/1:1,15:16:15.52:213,16,0	1/1:1,17:18:51.05:664,51,0	1/1:3,18:21:9.20:283,9,0	1/1:0,4:4:3.01:46,3,0
chr10	33217160	.	CTCTT	C	1878	PASS	AB=0.994;AC=38;AF=0.679;AN=56;BaseQRankSum=4.425;DP=574;FS=21.105;HRun=0;HaplotypeScore=157.0094;InbreedingCoeff=0.4599;MQ=43.84;MQ0=19;MQRankSum=-1.400;QD=4.66;ReadPosRankSum=1.553;VQSLOD=1.3450;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:40,1:40:21.18:21,0,310	1/1:12,0:12:1.42:54,1,0	0/0:17,0:1:2.99:0,3,24	0/0:28,0:6:11.51:0,12,101	0/0:28,0:28:54.67:0,55,432	0/0:40,0:40:88.28:0,88,707	0/0:19,0:14:32.11:0,32,226	1/1:25,0:17:28.78:169,29,0	0/1:23,0:23:22.86:23,0,294	1/1:24,1:24:19.66:305,20,0	1/1:13,1:13:7.20:40,7,0	0/1:25,0:25:11.64:32,0,12	1/1:22,1:21:5.34:135,5,0	1/1:24,0:23:0.70:15,1,0	0/0:25,0:25:38.59:0,39,732	1/1:28,1:29:20.08:197,20,0	0/0:14,0:12:8.91:0,9,248	1/1:7,0:6:8.48:58,8,0	1/1:13,0:9:13.50:187,13,0	1/1:18,0:18:4.65:33,5,0	1/1:8,0:7:5.92:101,6,0	1/1:21,0:21:0.98:37,1,0	1/1:24,0:21:2.99:24,3,0	0/1:12,0:12:0:0,0,0	1/1:15,1:16:3.70:49,4,0	1/1:18,0:17:41.23:333,41,0	1/1:20,0:20:27.77:216,28,0	1/1:5,0:4:3.87:26,4,0
chr10	33217191	.	T	TCA	1633.47	PASS	AB=0.995;AC=28;AF=0.538;AN=52;BaseQRankSum=4.317;DP=521;FS=57.435;HRun=0;HaplotypeScore=159.7019;InbreedingCoeff=0.1449;MQ=43.42;MQ0=8;MQRankSum=2.330;QD=4.59;ReadPosRankSum=-1.348;VQSLOD=1.1568;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:37,0:35:28.50:29,0,156	1/1:7,0:7:8.28:51,8,0	./.	./.	0/0:15,15:30:13.54:0,14,93	0/1:26,0:26:52.73:53,0,72	1/1:21,0:15:9.53:94,10,0	0/0:24,0:20:34.56:0,35,202	0/1:19,1:21:11.19:112,0,11	0/1:25,0:24:99:190,0,109	1/1:21,0:19:21.28:162,21,0	0/0:22,0:22:16.24:0,16,163	0/1:28,0:26:5.89:117,0,6	0/0:23,0:22:14.79:0,15,125	0/0:31,0:31:55.28:0,55,615	1/1:25,0:25:8.22:140,8,0	0/1:14,0:12:33.81:34,0,38	1/1:7,0:6:11.01:79,11,0	0/1:15,0:13:34.52:63,0,35	1/1:17,0:16:17.12:134,17,0	0/1:8,0:7:6.88:18,0,7	1/1:19,0:19:1.24:41,1,0	0/0:20,0:17:23.95:0,24,195	0/0:15,0:15:8.77:0,9,69	1/1:13,0:13:5.25:69,5,0	0/1:23,0:22:54.22:217,0,54	0/1:24,0:23:62.80:173,0,63	1/1:5,0:4:5.83:33,6,0
chr10	33219330	.	GCACA	G	201.18	PASS	AC=2;AF=0.037;AN=54;BaseQRankSum=1.493;DP=484;FS=7.966;HRun=0;HaplotypeScore=141.6844;InbreedingCoeff=0.4183;MQ=59.62;MQ0=1;MQRankSum=-0.657;QD=9.14;ReadPosRankSum=-1.625;VQSLOD=1.9489;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,7:22:18.06:291,18,0	0/0:5,0:5:3.01:0,3,36	0/0:21,0:17:15.05:0,15,256	0/0:28,0:22:21.07:0,21,403	0/0:23,0:23:30.09:0,30,479	0/0:26,0:26:19.31:0,19,306	0/0:20,0:20:14.96:0,15,212	0/0:16,0:15:18.05:0,18,277	0/0:10,0:10:18.06:0,18,296	0/0:19,0:17:21.06:0,21,322	0/0:17,0:17:2.93:0,3,37	0/0:15,0:15:11.71:0,12,303	0/0:19,0:17:6.02:0,6,100	0/0:13,0:13:24.48:0,24,391	0/0:10,0:13:26.83:0,27,592	0/0:17,0:17:9.03:0,9,152	0/0:35,0:33:30.08:0,30,503	0/0:19,0:19:17.97:0,18,243	0/0:18,0:17:24.08:0,24,361	./.	0/0:9,0:9:3.01:0,3,46	0/0:11,0:11:3.01:0,3,45	0/0:23,0:23:16.04:0,16,335	0/0:14,0:13:9.01:0,9,120	0/0:18,0:16:6.02:0,6,87	0/0:15,0:15:33.11:0,33,573	0/0:18,0:18:21.85:0,22,275	0/0:8,0:8:12.04:0,12,252
chr10	33219359	.	C	CT	128.03	PASS	AB=0.855;AC=5;AF=0.089;AN=56;BaseQRankSum=6.295;DP=475;FS=1.825;HRun=0;HaplotypeScore=156.1070;InbreedingCoeff=0.3167;MQ=47.31;MQ0=3;MQRankSum=-6.001;QD=2.21;ReadPosRankSum=3.423;VQSLOD=2.9880;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:35.37:0,35,319	0/0:7,0:7:12.03:0,12,151	0/0:20,0:15:42.12:0,42,550	0/0:19,0:15:45.11:0,45,596	0/0:21,0:21:40.98:0,41,473	0/0:30,0:30:39.43:0,39,438	0/0:22,0:22:36.06:0,36,429	0/0:16,0:15:39.10:0,39,519	0/0:11,0:11:17.85:0,18,134	0/0:17,0:15:44.98:0,45,530	0/0:16,0:16:11.53:0,12,165	0/1:12,4:16:39.58:80,0,40	0/0:19,0:17:6.02:0,6,80	1/1:13,0:13:23.35:124,23,0	0/0:19,0:19:51.08:0,51,684	0/0:13,0:13:11.92:0,12,121	0/0:40,0:38:68.05:0,68,836	0/0:12,0:12:18.88:0,19,266	0/0:19,0:18:50.58:0,51,593	0/0:15,0:15:12.04:0,12,160	0/0:9,0:9:9.03:0,9,119	0/0:12,0:12:15.52:0,16,201	0/1:18,3:21:12.59:36,0,13	0/1:7,1:7:5.41:5,0,18	0/0:22,0:20:27.09:0,27,362	0/0:16,0:16:44.80:0,45,475	0/0:15,0:15:21.45:0,21,243	0/0:6,0:6:12:0,12,145
chr10	33219361	.	C	CACACACACTAG	6203.20	PASS	AB=0.932;AC=28;AF=0.500;AN=56;BaseQRankSum=-3.913;DP=394;FS=2.383;HRun=0;HaplotypeScore=172.3392;InbreedingCoeff=-0.2869;MQ=50.12;MQ0=3;MQRankSum=-4.791;QD=19.82;ReadPosRankSum=1.035;VQSLOD=3.9433;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:21,0:22:42.75:43,0,398	0/1:6,0:6:25.72:26,0,38	0/0:19,0:14:33.10:0,33,558	0/0:17,0:13:36.12:0,36,754	0/1:12,0:19:59.14:608,0,59	0/1:17,0:21:84.47:471,0,84	0/1:14,0:17:85.81:196,0,86	0/0:15,0:15:7.73:0,8,135	1/1:3,0:9:18.06:622,18,0	0/1:13,0:13:61.53:62,0,113	0/1:12,0:12:32.26:32,0,50	1/1:7,3:17:21.06:812,21,0	0/1:11,0:10:13.46:13,0,18	1/1:0,7:13:24.08:1183,24,0	0/0:20,0:20:53.97:0,54,1288	0/1:9,0:10:27.24:141,0,27	0/1:26,0:35:99:728,0,237	0/0:9,0:9:17:0,17,122	0/1:16,0:15:22.80:23,0,214	0/1:11,0:11:9.80:10,0,54	0/1:7,0:7:15.95:16,0,24	0/1:8,0:8:10.49:10,0,64	1/1:3,4:16:14.02:781,14,0	1/1:3,1:7:5.48:224,5,0	0/1:15,0:15:44.28:44,0,114	0/1:9,0:10:69.89:70,0,114	0/1:9,0:11:81.57:82,0,99	0/1:5,0:5:6.99:7,0,67
chr10	33219382	.	CT	C	2978.74	PASS	AB=1.000;AC=39;AF=0.696;AN=56;BaseQRankSum=-0.098;DP=400;FS=13.971;HRun=9;HaplotypeScore=124.7764;InbreedingCoeff=0.8447;MQ=58.31;MQ0=2;MQRankSum=1.786;QD=10.03;ReadPosRankSum=2.898;VQSLOD=1.1678;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,22:26:50.90:447,51,0	1/1:9,0:9:23.96:102,24,0	0/0:13,0:7:5.20:0,5,46	0/0:10,0:7:8.71:0,9,60	1/1:18,0:18:37.77:212,38,0	1/1:24,0:24:63.93:357,64,0	1/1:18,0:18:37.77:212,38,0	1/1:14,0:14:27.58:180,28,0	1/1:9,0:9:17.39:96,17,0	1/1:9,0:9:22.34:111,22,0	1/1:17,0:17:27.66:142,28,0	0/0:16,0:16:28.56:0,29,161	0/0:13,0:13:0:0,0,1	0/0:14,0:14:18.82:0,19,97	0/0:20,0:20:51.09:0,51,562	1/1:13,0:13:12.06:98,12,0	1/1:37,0:37:72.54:401,73,0	1/1:7,0:7:15.59:65,16,0	1/1:13,0:13:17.75:136,18,0	1/1:23,0:23:39.44:203,39,0	0/1:5,0:5:3.07:7,0,3	1/1:10,0:10:24.93:117,25,0	0/0:10,0:10:21.27:0,21,101	0/0:7,0:6:10.95:0,11,56	1/1:18,0:18:25.60:115,26,0	1/1:10,0:10:14.85:74,15,0	1/1:14,0:14:17.19:71,17,0	1/1:3,0:3:6.66:22,7,0
chr10	33219390	.	T	TA	3010.65	PASS	AB=0.617;AC=27;AF=0.482;AN=56;BaseQRankSum=-5.244;DP=400;FS=0.000;HRun=0;HaplotypeScore=117.0997;InbreedingCoeff=0.7536;MQ=63.30;MQ0=1;MQRankSum=2.844;QD=16.10;ReadPosRankSum=0.258;VQSLOD=5.2611;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:25:49.23:0,49,245	1/1:0,9:9:27.06:279,27,0	0/0:14,0:7:14.26:0,14,96	0/0:9,0:7:14.45:0,14,135	0/0:1,0:16:31.36:0,31,124	0/0:3,0:24:49.64:0,50,178	0/0:0,0:18:28.81:0,29,105	1/1:7,10:18:7.49:251,7,0	0/0:1,0:7:13.82:0,14,49	1/1:1,9:10:11.85:226,12,0	1/1:3,15:19:24.32:354,24,0	0/0:16,0:16:44.71:0,45,484	1/1:13,0:13:2.53:22,3,0	0/0:9,0:9:23.90:0,24,268	0/0:20,0:20:57.05:0,57,742	0/1:6,6:12:5.63:134,0,6	0/0:2,0:38:59.99:0,60,219	1/1:1,5:6:14.55:159,15,0	0/1:4,10:14:5.62:178,0,6	1/1:5,21:26:12.51:475,13,0	0/1:1,2:3:10.77:27,0,11	1/1:1,9:10:21.69:238,22,0	0/0:11,0:11:29.68:0,30,294	0/0:6,0:5:13.85:0,14,147	1/1:2,15:17:35.59:323,36,0	1/1:2,10:12:28.76:259,29,0	1/1:2,12:14:18.74:203,19,0	1/1:0,4:4:9.02:97,9,0
chr10	33219391	.	TAA	T	2218.21	PASS	AB=0.941;AC=19;AF=0.339;AN=56;BaseQRankSum=-2.397;DP=410;FS=2.046;HRun=9;HaplotypeScore=127.0551;InbreedingCoeff=0.8931;MQ=65.46;MQ0=1;MQRankSum=-1.474;QD=13.69;ReadPosRankSum=4.210;VQSLOD=1.2221;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:33.16:0,33,467	0/0:10,0:10:30.05:0,30,303	0/1:15,0:9:3.25:3,0,63	0/0:8,0:6:9.50:0,10,141	1/1:16,0:16:33.19:203,33,0	1/1:24,0:24:53.28:356,53,0	1/1:18,0:18:32.24:196,32,0	0/0:19,0:19:45.09:0,45,497	1/1:7,0:7:14.66:103,15,0	0/0:11,0:11:28.86:0,29,272	0/0:19,0:20:54.10:0,54,565	1/1:2,14:16:38.80:452,39,0	0/0:2,0:14:6.01:0,6,68	1/1:1,7:8:21.05:243,21,0	0/0:20,0:20:51.17:0,51,820	0/0:12,0:12:27.02:0,27,294	1/1:38,0:38:67.71:457,68,0	0/0:6,0:6:15.02:0,15,142	0/0:14,0:14:31.28:0,31,297	0/0:27,0:27:72.57:0,73,758	0/0:4,0:4:9.02:0,9,123	0/0:10,0:10:27.04:0,27,266	1/1:8,5:13:24.06:277,24,0	1/1:1,5:5:12.03:138,12,0	0/0:17,0:17:39.07:0,39,394	0/0:12,0:12:36.07:0,36,394	0/0:15,0:15:30.06:0,30,326	0/0:4,0:4:9.01:0,9,85
chr10	33220127	.	T	TACAC	2743.91	PASS	AB=1.000;AC=41;AF=0.820;AN=50;BaseQRankSum=-0.091;DP=551;FS=16.579;HRun=0;HaplotypeScore=134.0947;InbreedingCoeff=0.2811;MQ=66.65;MQ0=19;MQRankSum=-1.048;QD=5.94;ReadPosRankSum=-1.641;VQSLOD=1.4382;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	1/1:4,2:7:6.49:141,6,0	0/1:35,0:24:0:0,0,0	./.	1/1:21,0:20:5.78:74,6,0	1/1:31,0:29:2.71:52,3,0	1/1:18,0:17:3.89:43,4,0	1/1:18,0:17:3.01:39,3,0	0/1:24,0:23:0.06:1,0,0	1/1:12,3:17:15.91:238,16,0	1/1:17,5:27:3.01:70,3,0	0/1:13,0:13:31.87:32,0,81	1/1:22,0:20:8.99:115,9,0	0/0:9,0:9:6.02:0,6,92	0/1:14,0:16:26.31:26,0,85	1/1:19,4:26:8.81:175,9,0	1/1:20,0:19:3.48:48,3,0	1/1:21,0:19:18.02:330,18,0	1/1:13,0:12:16.30:315,16,0	1/1:17,0:16:5.85:88,6,0	1/1:9,4:13:3.01:70,3,0	1/1:20,0:19:3.01:67,3,0	./.	0/0:21,0:20:12.01:0,12,153	1/1:21,0:20:11.99:171,12,0	1/1:24,0:23:25.09:342,25,0	1/1:26,0:25:21.54:430,22,0	0/1:7,0:6:0:0,0,0
chr10	33220463	.	AT	A	1461.33	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=8.452;DP=542;FS=0.532;HRun=7;HaplotypeScore=51.4183;InbreedingCoeff=0.9908;MQ=71.14;MQ0=0;MQRankSum=1.592;QD=24.77;ReadPosRankSum=2.253;VQSLOD=4.0127;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:75.24:0,75,943	0/0:8,0:8:21.07:0,21,264	0/0:12,0:12:18.04:0,18,207	0/0:7,0:7:15.05:0,15,189	0/0:27,0:27:81.26:0,81,1018	0/0:21,0:21:63.20:0,63,793	0/0:16,0:16:36.11:0,36,441	0/0:46,0:46:99:0,123,1525	0/0:8,0:8:24.08:0,24,302	0/0:16,0:16:42.13:0,42,528	0/0:27,0:27:69.22:0,69,866	1/1:1,13:14:33.07:337,33,0	0/0:17,0:17:51.16:0,51,641	1/1:0,16:16:45.10:459,45,0	0/0:31,0:31:90.25:0,90,1116	0/0:20,0:20:51.14:0,51,616	0/0:26,0:26:72.23:0,72,906	0/0:18,0:18:51.16:0,51,641	0/0:18,0:18:54.17:0,54,670	0/0:25,0:25:75.23:0,75,932	0/0:10,0:10:30.10:0,30,377	0/0:17,0:17:48.14:0,48,591	1/1:2,18:20:53.90:550,54,0	1/1:0,9:9:27.06:275,27,0	0/0:21,0:21:60.19:0,60,755	0/0:28,0:28:84.27:0,84,1057	0/0:26,0:26:69.22:0,69,868	0/0:10,0:10:27.09:0,27,340
chr10	33222291	.	A	AGTGT	11951.14	PASS	AB=0.809;AC=38;AF=0.679;AN=56;BaseQRankSum=-9.961;DP=758;FS=5.215;HRun=0;HaplotypeScore=148.7805;InbreedingCoeff=0.6713;MQ=56.25;MQ0=24;MQRankSum=-1.437;QD=21.23;ReadPosRankSum=-0.736;VQSLOD=3.8965;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:38,0:37:17.39:17,0,398	1/1:4,3:7:9.03:200,9,0	0/1:57,0:11:0.39:0,0,75	0/0:30,0:13:11.71:0,12,165	0/0:5,0:29:45.04:0,45,415	0/0:10,0:29:45.05:0,45,419	0/0:5,0:19:26.62:0,27,233	1/1:20,14:37:44.81:515,45,0	0/0:5,0:26:48.02:0,48,439	1/1:10,26:36:75.13:1504,75,0	1/1:6,10:19:26.56:513,27,0	1/1:6,0:25:19.63:210,20,0	1/1:6,22:31:8.06:1138,8,0	1/1:5,0:23:20.85:292,21,0	0/0:27,0:27:66.18:0,66,998	1/1:7,17:27:44.62:952,45,0	0/0:9,0:34:63.08:0,63,611	1/1:5,5:10:6.02:145,6,0	1/1:17,11:26:36.12:759,36,0	1/1:7,13:24:33.32:719,33,0	1/1:14,29:44:47.95:1102,48,0	0/1:9,14:22:27.59:414,0,28	1/1:2,0:24:12.02:177,12,0	1/1:9,0:28:13.20:149,13,0	1/1:5,14:21:10.39:841,10,0	1/1:7,18:27:35.22:1150,35,0	0/1:9,13:23:7.22:861,0,7	1/1:4,5:9:12.04:290,12,0
chr10	33223579	.	TAAAGA	T	339.61	PASS	AB=0.804;AC=14;AF=0.875;AN=16;BaseQRankSum=-2.136;DP=48;FS=2.114;HRun=0;HaplotypeScore=35.8621;MQ=131.14;MQ0=1;MQRankSum=-1.082;QD=8.09;ReadPosRankSum=-0.361;VQSLOD=1.1118;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/1:6,2:6:27.23:105,0,27	0/1:20,3:18:99:166,0,138	./.	./.	./.	./.	1/1:1,0:1:2.97:20,3,0	./.	1/1:1,0:1:2.97:20,3,0	1/1:1,0:1:2.97:20,3,0	1/1:2,0:2:2.97:20,3,0	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	1/1:2,0:2:2.98:21,3,0	./.	./.	1/1:2,0:2:5.99:48,6,0
chr10	33224608	.	ATTTGTAT	A	1984.17	PASS	AB=0.556;AC=9;AF=0.161;AN=56;BaseQRankSum=5.512;DP=520;FS=68.587;HRun=0;HaplotypeScore=124.0788;InbreedingCoeff=0.8303;MQ=62.44;MQ0=0;MQRankSum=-8.370;QD=34.81;ReadPosRankSum=0.888;VQSLOD=0.4132;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,117,2818	0/0:7,0:7:21.07:0,21,623	0/0:11,0:10:30.10:0,30,918	0/0:9,0:9:24.08:0,24,709	1/1:2,15:17:21.03:407,21,0	1/1:0,11:11:24.08:546,24,0	1/1:0,2:3:9.03:195,9,0	0/0:20,0:20:60.19:0,60,2003	0/1:3,12:15:77.94:819,0,78	0/0:27,0:27:75.26:0,75,2454	0/0:31,0:31:90.30:0,90,3209	0/0:15,0:15:36.12:0,36,881	0/0:23,0:23:66.23:0,66,2237	0/0:11,0:11:30.10:0,30,725	0/0:25,0:25:66.22:0,66,2323	0/0:19,0:19:54.19:0,54,1971	1/1:4,7:11:8.93:174,9,0	0/0:8,0:8:24.04:0,24,644	0/0:24,0:24:66.21:0,66,1927	0/0:35,0:35:99:0,99,3561	0/0:15,0:15:33.11:0,33,1168	0/0:17,0:17:45.15:0,45,1669	0/0:21,0:21:57.19:0,57,1345	0/0:17,0:17:39.11:0,39,909	0/0:26,0:26:69.23:0,69,2487	0/0:30,0:30:84.27:0,84,2574	0/0:20,0:20:60.21:0,60,2203	0/0:9,0:9:27.09:0,27,980
chr10	33224614	.	AT	A	1860.45	PASS	AB=1.000;AC=20;AF=0.357;AN=56;BaseQRankSum=8.639;DP=506;FS=3.109;HRun=11;HaplotypeScore=62.4122;InbreedingCoeff=0.8280;MQ=62.88;MQ0=0;MQRankSum=-2.767;QD=11.56;ReadPosRankSum=2.116;VQSLOD=3.3978;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,35:43:89.86:739,90,0	0/0:8,0:8:15:0,15,148	0/0:12,0:11:27.04:0,27,272	0/1:9,0:9:12.25:12,0,80	1/1:15,0:15:9.48:31,9,0	1/1:11,0:11:13.13:45,13,0	1/1:3,0:3:4.74:16,5,0	0/0:21,0:22:53.96:0,54,552	0/1:13,0:13:2.87:57,0,3	0/0:28,0:28:51.13:0,51,544	0/0:30,0:32:81.04:0,81,846	1/1:2,12:14:29.95:246,30,0	0/0:23,0:23:45.05:0,45,459	1/1:1,11:12:29.96:246,30,0	0/0:24,1:25:32.50:0,32,551	0/0:18,0:18:45.11:0,45,473	1/1:7,0:7:7.70:34,8,0	0/0:9,0:9:17.94:0,18,175	0/0:20,0:20:44.88:0,45,448	0/0:34,0:34:85.46:0,85,898	0/0:13,0:13:30.06:0,30,311	0/0:17,0:16:45.07:0,45,467	1/1:3,16:19:47.94:394,48,0	1/1:2,13:15:29.96:246,30,0	0/0:26,0:26:60.12:0,60,628	0/0:29,0:29:50.91:0,51,502	0/0:20,0:20:51.13:0,51,543	0/0:9,0:9:24.01:0,24,236
chr10	33225280	.	G	GA	8066.01	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-14.852;DP=455;FS=2.738;HRun=6;HaplotypeScore=41.2142;InbreedingCoeff=0.9935;MQ=84.52;MQ0=0;MQRankSum=-1.386;QD=32.52;ReadPosRankSum=-1.516;VQSLOD=4.4289;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:60.14:0,60,612	1/1:1,4:5:12.04:151,12,0	0/0:17,0:17:38.43:0,38,367	0/0:12,0:12:27.05:0,27,275	0/0:21,0:21:60.14:0,60,612	0/0:25,0:24:66.15:0,66,673	0/0:8,0:8:21.04:0,21,214	1/1:4,25:29:69.15:867,69,0	0/0:13,0:13:39.09:0,39,398	1/1:3,19:22:54.17:679,54,0	1/1:0,13:13:39.12:491,39,0	0/0:15,0:15:42.09:0,42,429	1/1:1,24:25:69.22:868,69,0	0/0:10,0:10:30.07:0,30,306	0/0:22,0:22:60.11:0,60,603	1/1:2,16:18:45.14:566,45,0	0/0:11,0:11:30.06:0,30,306	1/1:0,9:9:27.09:340,27,0	1/1:3,16:19:48.10:575,48,0	1/1:1,15:16:42.05:493,42,0	1/1:0,21:21:57.18:717,57,0	1/1:1,12:13:39.12:486,39,0	0/0:13,0:13:39.09:0,39,398	0/0:18,0:18:54.12:0,54,551	1/1:0,12:12:30.10:377,30,0	1/1:3,12:15:36.12:453,36,0	1/1:1,23:23:63.20:793,63,0	1/1:0,7:7:18.02:210,18,0
chr10	33226974	.	ATATAT	A	2943.72	PASS	AB=0.531;AC=9;AF=0.173;AN=52;BaseQRankSum=8.293;DP=234;FS=0.587;HRun=0;HaplotypeScore=50.2269;InbreedingCoeff=0.6237;MQ=77.70;MQ0=0;MQRankSum=-1.820;QD=50.75;ReadPosRankSum=2.777;VQSLOD=3.6873;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:7:16.06:0,16,487	0/0:1,0:1:3.01:0,3,93	0/0:2,0:2:6.02:0,6,158	0/0:11,0:11:10.25:0,10,216	1/1:0,9:9:27.09:566,27,0	0/1:2,15:17:50.87:775,0,51	1/1:0,1:1:3.01:63,3,0	0/0:43,0:43:99:0,120,3441	1/1:0,4:4:12.04:240,12,0	0/0:8,0:8:24.08:0,24,740	0/0:6,0:6:15.04:0,15,353	0/0:7,0:7:21.05:0,21,526	0/0:4,0:4:9.03:0,9,263	0/0:2,0:2:6.02:0,6,186	0/0:5,0:5:15.05:0,15,463	0/0:4,0:4:9.03:0,9,279	1/1:0,27:27:69.24:1447,69,0	0/0:7,0:7:21.04:0,21,551	0/0:14,0:14:42.14:0,42,1198	0/0:3,0:3:9.03:0,9,272	./.	0/0:1,0:1:3.01:0,3,93	0/0:7,0:7:18:0,18,418	./.	0/0:4,0:4:9.03:0,9,239	0/0:10,0:10:27.08:0,27,759	0/0:11,0:11:30.10:0,30,874	0/0:18,0:18:51.15:0,51,1486
chr10	33228662	.	AT	A	721.73	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-1.566;DP=540;FS=17.700;HRun=3;HaplotypeScore=74.9455;InbreedingCoeff=0.9893;MQ=68.96;MQ0=1;MQRankSum=-2.327;QD=26.73;ReadPosRankSum=3.628;VQSLOD=2.1247;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:87.25:0,87,1187	0/0:7,0:7:21.07:0,21,301	0/0:12,0:10:20.24:0,20,320	0/0:11,0:11:32.81:0,33,357	0/0:23,0:23:69.23:0,69,990	0/0:18,0:18:54.18:0,54,776	0/0:20,0:20:57.13:0,57,744	0/0:32,0:32:90.26:0,90,1207	0/0:13,0:13:39.11:0,39,525	0/0:18,0:18:54.16:0,54,714	0/0:13,0:13:39.11:0,39,523	0/0:17,0:17:47.34:0,47,605	0/0:22,0:22:60.15:0,60,791	0/0:20,0:20:60.18:0,60,829	1/1:0,27:27:66.21:817,66,0	0/0:12,0:12:33.11:0,33,469	0/0:23,0:23:66.11:0,66,899	0/0:19,0:19:54.12:0,54,710	0/0:24,0:24:69.13:0,69,846	0/0:16,0:16:48.02:0,48,589	0/0:9,0:9:27.09:0,27,387	0/0:13,0:13:36.11:0,36,501	0/0:13,0:13:39.12:0,39,541	0/0:19,0:18:54.09:0,54,681	0/0:24,0:24:66.10:0,66,823	0/0:28,0:28:80.62:0,81,962	0/0:35,0:35:99:0,105,1430	0/0:20,0:20:60.19:0,60,836
chr10	33230129	.	G	GT	1119.57	PASS	AC=2;AF=0.037;AN=54;BaseQRankSum=-8.815;DP=704;FS=0.000;HRun=1;HaplotypeScore=68.6633;InbreedingCoeff=0.9918;MQ=83.51;MQ0=0;MQRankSum=-4.243;QD=37.32;ReadPosRankSum=-0.180;VQSLOD=3.7830;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,30:30:81.27:1214,81,0	0/0:7,0:7:18.06:0,18,234	0/0:26,0:26:69.14:0,69,839	0/0:18,0:18:51.06:0,51,591	0/0:26,0:26:78.25:0,78,1013	0/0:24,0:23:72.23:0,72,935	0/0:29,0:29:84.26:0,84,1077	0/0:31,0:31:90.27:0,90,1142	0/0:32,0:32:93.30:0,93,1207	0/0:41,0:41:99:0,120,1544	0/0:19,0:19:54.17:0,54,699	0/0:24,0:24:72.20:0,72,903	0/0:25,0:25:72.23:0,72,934	0/0:25,0:25:75.23:0,75,959	0/0:22,0:22:63.19:0,63,804	0/0:28,0:28:84.27:0,84,1084	0/0:29,0:29:84.27:0,84,1091	0/0:11,0:11:33.11:0,33,428	0/0:31,0:31:93.25:0,93,1152	0/0:24,0:24:72.22:0,72,915	0/0:25,0:25:75.23:0,75,960	0/0:28,0:28:81.25:0,81,1037	0/0:26,0:26:69.22:0,69,894	0/0:29,0:29:87.25:0,87,1109	0/0:29,0:29:87.28:0,87,1129	0/0:30,0:30:90.29:0,90,1167	0/0:35,0:35:99:0,105,1357	./.
chr10	33230676	.	A	AC	10357.22	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-15.841;DP=659;FS=0.610;HRun=5;HaplotypeScore=68.5683;InbreedingCoeff=0.9987;MQ=83.99;MQ0=0;MQRankSum=-2.550;QD=34.18;ReadPosRankSum=0.684;VQSLOD=5.1030;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,132,1418	1/1:0,11:11:30.10:395,30,0	0/0:25,0:24:43.84:0,44,524	0/0:24,0:22:34.43:0,34,326	0/0:42,0:42:99:0,117,1231	0/0:22,0:22:63.16:0,63,677	0/0:16,0:16:48.12:0,48,515	1/1:0,22:22:66.16:834,66,0	0/0:20,0:20:51.11:0,51,541	1/1:1,21:22:63.18:809,63,0	1/1:1,24:25:66.21:860,66,0	0/0:18,0:18:51.13:0,51,548	1/1:4,19:23:60.19:775,60,0	0/0:24,0:24:72.15:0,72,758	0/0:31,0:31:93.23:0,93,999	1/1:0,18:18:45.15:592,45,0	0/0:38,0:38:99:0,99,1026	1/1:2,14:16:33.11:434,33,0	1/1:2,19:21:57.15:707,57,0	1/1:1,31:32:90.21:1160,90,0	1/1:2,23:25:63.20:829,63,0	1/1:0,16:16:45.15:591,45,0	0/0:21,0:21:63.16:0,63,676	0/0:29,0:28:87.18:0,87,916	1/1:3,19:22:57.19:749,57,0	1/1:4,22:26:66.18:834,66,0	1/1:1,17:17:42.14:552,42,0	1/1:0,6:6:18.06:235,18,0
chr10	33232699	.	C	CT	20473.18	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=-15.877;DP=726;FS=1.435;HRun=3;HaplotypeScore=58.5315;InbreedingCoeff=0.9993;MQ=85.07;MQ0=0;MQRankSum=-4.976;QD=37.57;ReadPosRankSum=3.508;VQSLOD=5.2981;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:75.21:0,75,878	1/1:1,8:9:24.08:336,24,0	0/0:27,0:27:49.02:0,49,752	0/0:19,0:19:32.77:0,33,385	1/1:1,38:39:99:1566,114,0	1/1:1,30:31:75.25:1050,75,0	1/1:1,12:13:30.10:420,30,0	1/1:2,42:44:99:1730,127,0	1/1:1,22:23:54.18:756,54,0	1/1:0,23:23:69.23:961,69,0	1/1:1,25:26:69.23:956,69,0	0/0:27,0:27:78.23:0,78,925	1/1:2,36:38:96.32:1344,96,0	0/0:23,0:23:69.21:0,69,828	1/1:0,30:30:87.29:1218,87,0	1/1:3,26:29:69.23:966,69,0	1/1:0,17:17:48.16:672,48,0	1/1:0,16:16:48.16:672,48,0	1/1:2,16:18:48.16:667,48,0	1/1:2,41:43:99:1700,123,0	1/1:1,12:13:30.10:420,30,0	1/1:1,28:29:81.27:1134,81,0	0/0:34,0:34:99:0,99,1188	0/0:25,0:25:69.21:0,69,827	1/1:1,23:24:60.20:840,60,0	1/1:3,32:35:96.32:1344,96,0	1/1:1,33:32:90.30:1259,90,0	1/1:0,11:11:33.11:462,33,0
chr10	33233274	.	TGCA	T	6694.71	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=11.654;DP=688;FS=4.337;HRun=0;HaplotypeScore=98.5996;InbreedingCoeff=0.9651;MQ=86.12;MQ0=0;MQRankSum=-0.235;QD=46.17;ReadPosRankSum=2.818;VQSLOD=6.9271;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:60.21:0,60,1392	0/0:10,0:10:30.10:0,30,723	0/0:24,0:24:72.21:0,72,1632	0/0:21,0:21:58.75:0,59,1357	1/1:0,22:22:60.04:976,60,0	1/1:0,27:27:78.27:1453,78,0	1/1:0,29:29:66.23:1229,66,0	0/0:27,0:27:81.28:0,81,1978	1/1:0,20:20:51.17:951,51,0	0/0:32,0:32:96.33:0,96,2346	0/0:17,0:17:51.18:0,51,1245	0/0:17,0:17:48.12:0,48,1124	0/0:46,0:46:99:0,138,3331	0/0:32,0:32:96.33:0,96,2320	1/1:0,31:31:69.24:1285,69,0	0/0:24,0:24:72.19:0,72,1636	1/1:0,16:16:45.07:800,45,0	0/0:12,0:12:30.10:0,30,674	0/0:20,0:20:60.18:0,60,1359	0/0:30,0:30:90.29:0,90,2093	0/0:36,0:36:99:0,108,2653	0/0:25,0:25:75.26:0,75,1829	0/0:30,0:30:90.29:0,90,2146	0/0:30,0:30:90.31:0,90,2194	0/0:27,0:27:81.28:0,81,1945	0/0:23,0:23:69.24:0,69,1693	0/0:37,0:37:99:0,111,2689	0/0:1,0:1:3.01:0,3,74
chr10	33235620	.	AAAGG	A	774.35	PASS	AB=0.993;AC=21;AF=0.389;AN=54;BaseQRankSum=6.467;DP=452;FS=25.461;HRun=0;HaplotypeScore=118.9738;InbreedingCoeff=-0.3302;MQ=30.64;MQ0=27;MQRankSum=3.636;QD=2.70;ReadPosRankSum=4.848;VQSLOD=0.1706;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:11,0:10:16.84:17,0,47	0/1:8,0:8:37.79:38,0,45	0/0:28,0:3:6.02:0,6,135	0/0:35,0:3:9.03:0,9,175	0/0:8,0:8:2.90:0,3,16	1/1:13,0:10:5.63:88,6,0	./.	0/0:23,0:22:9.24:0,9,144	1/1:10,0:10:17.70:152,18,0	0/1:20,0:20:4.98:117,0,5	0/1:22,1:22:60.69:61,0,182	0/0:20,0:20:31.15:0,31,197	0/1:18,0:18:45.77:46,0,84	0/0:25,1:26:53.34:0,53,319	0/1:17,0:17:11.26:11,0,55	0/1:16,0:16:31:31,0,118	0/0:5,1:4:3.99:0,4,14	0/1:6,0:5:16.96:17,0,33	0/1:14,0:13:0.75:1,0,154	0/1:23,0:23:80.65:81,0,157	0/1:7,0:6:5.81:6,0,14	0/1:19,0:17:53.72:54,0,119	0/1:15,0:15:5.37:5,0,109	0/0:7,0:7:2.96:0,3,20	0/1:23,1:22:16.99:17,0,239	0/1:21,1:17:16.64:129,0,17	0/1:17,0:17:31.69:32,0,85	0/1:4,0:4:12.40:24,0,12
chr10	33235622	.	AGG	A	2636.08	PASS	AB=0.966;AC=40;AF=0.741;AN=54;BaseQRankSum=-0.040;DP=450;FS=6.232;HRun=3;HaplotypeScore=105.0069;InbreedingCoeff=0.4382;MQ=30.60;MQ0=30;MQRankSum=1.746;QD=7.57;ReadPosRankSum=2.759;VQSLOD=0.3937;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:11:5.09:19,5,0	1/1:5,3:8:9.43:82,9,0	0/0:29,0:3:6:0,6,80	0/0:40,0:3:9.03:0,9,166	0/0:8,0:8:2.61:0,3,12	1/1:13,0:10:7.91:53,8,0	./.	1/1:22,0:21:22.93:312,23,0	1/1:10,0:10:16.71:92,17,0	1/1:16,4:20:17.48:290,17,0	1/1:20,4:23:13.83:86,14,0	1/1:18,1:19:28.70:152,29,0	1/1:15,3:18:39.75:273,40,0	1/1:23,1:23:29.66:132,30,0	0/1:17,1:17:29.58:30,0,58	1/1:12,3:15:20.61:159,21,0	0/0:6,0:4:1.53:0,2,4	0/1:6,0:5:22.27:28,0,22	0/1:10,1:10:6.60:105,0,7	1/1:18,5:23:22.51:129,23,0	0/0:7,0:6:0.84:0,1,2	1/1:13,4:15:13.14:107,13,0	1/1:14,1:15:21.47:102,21,0	0/1:7,0:7:0.02:0,0,0	1/1:20,6:24:13.37:113,13,0	1/1:18,3:16:32.30:326,32,0	1/1:12,2:14:29.16:181,29,0	1/1:4,0:4:1.58:6,2,0
chr10	33235631	.	GAGAGAGA	G	6107.79	PASS	AB=1.000;AC=44;AF=0.786;AN=56;BaseQRankSum=-1.927;DP=488;FS=6.022;HRun=0;HaplotypeScore=118.5142;InbreedingCoeff=0.4200;MQ=33.47;MQ0=47;MQRankSum=0.460;QD=17.55;ReadPosRankSum=2.314;VQSLOD=3.5054;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:10:4.56:32,5,0	1/1:7,0:7:12.04:227,12,0	0/0:39,0:3:2.99:0,3,24	0/0:53,0:6:15.05:0,15,240	0/0:13,0:13:3.56:0,4,13	0/0:15,0:12:0.91:0,1,1	0/0:19,0:16:0:0,0,0	1/1:18,0:17:27.09:342,27,0	0/1:10,0:10:49.98:95,0,50	1/1:22,0:22:42.35:645,42,0	1/1:21,1:20:16.88:307,17,0	1/1:16,0:13:27:356,27,0	1/1:16,3:18:30:426,30,0	1/1:25,0:23:36.47:445,36,0	1/1:15,0:13:3.44:97,3,0	1/1:10,3:12:21.07:328,21,0	1/1:7,0:4:2.80:13,3,0	0/1:5,0:4:23.46:54,0,23	1/1:10,1:10:21.06:271,21,0	1/1:20,5:25:28.58:438,29,0	1/1:10,0:7:3.01:50,3,0	1/1:14,4:16:23.25:372,23,0	1/1:17,0:16:11.64:281,12,0	1/1:8,0:8:2.91:19,3,0	1/1:25,0:22:25.01:388,25,0	1/1:22,0:16:42.99:480,43,0	1/1:12,2:14:19.36:367,19,0	1/1:4,0:3:6:74,6,0
chr10	33235633	.	GAGAGA	G	5094.08	PASS	AB=1.000;AC=45;AF=0.804;AN=56;BaseQRankSum=-0.593;DP=495;FS=6.403;HRun=0;HaplotypeScore=113.7840;InbreedingCoeff=0.3313;MQ=33.87;MQ0=48;MQRankSum=2.442;QD=13.99;ReadPosRankSum=3.344;VQSLOD=3.6145;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:10:3.89:29,4,0	1/1:4,3:7:11.99:154,12,0	0/0:40,0:4:6.01:0,6,58	0/0:55,0:6:15.05:0,15,217	1/1:12,0:12:1.48:12,1,0	0/0:16,0:13:0.47:0,0,2	0/0:19,0:16:0:0,0,0	1/1:17,0:16:33.11:419,33,0	0/1:10,0:10:11.08:125,0,11	1/1:17,4:21:43.40:533,43,0	1/1:20,3:21:18.86:232,19,0	1/1:16,0:13:25.47:214,25,0	1/1:18,0:17:30.03:385,30,0	1/1:26,0:24:36.51:193,37,0	0/1:15,0:13:13.94:98,0,14	1/1:14,0:12:21.07:290,21,0	1/1:7,0:4:2.92:17,3,0	0/1:5,0:4:21.60:65,0,22	1/1:10,0:9:21.04:249,21,0	1/1:27,0:26:31.31:341,31,0	1/1:11,0:8:2.98:22,3,0	1/1:19,0:17:21.74:247,22,0	1/1:17,0:16:21.46:144,21,0	1/1:7,0:7:2.50:38,2,0	1/1:21,6:24:31.24:319,31,0	1/1:21,1:16:45.08:628,45,0	1/1:14,0:14:9.80:299,10,0	1/1:4,0:3:5.93:41,6,0
chr10	33235635	.	GAGA	G	4735.17	PASS	AB=1.000;AC=46;AF=0.821;AN=56;BaseQRankSum=-1.472;DP=500;FS=4.032;HRun=0;HaplotypeScore=107.2655;InbreedingCoeff=0.4266;MQ=37.53;MQ0=51;MQRankSum=0.448;QD=13.08;ReadPosRankSum=3.562;VQSLOD=4.1714;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:9:4.56:31,5,0	1/1:7,0:7:12.04:148,12,0	0/0:43,0:5:6.47:0,6,57	0/0:59,0:8:20.92:0,21,234	1/1:11,0:12:5.57:36,6,0	0/0:14,0:11:0.17:0,0,1	0/0:20,0:17:0:0,0,0	1/1:16,0:15:33.11:419,33,0	1/1:9,0:9:13.73:164,14,0	1/1:20,0:20:43.34:462,43,0	1/1:21,1:20:18.64:199,19,0	1/1:15,0:12:20.86:213,21,0	1/1:18,0:17:28.59:326,29,0	1/1:26,0:24:26.15:169,26,0	0/1:15,0:13:13.64:65,0,14	1/1:14,0:11:21.05:249,21,0	1/1:7,0:4:2.98:22,3,0	0/1:5,0:5:15.83:83,0,16	1/1:11,0:10:24.04:276,24,0	1/1:29,0:28:36.66:328,37,0	1/1:10,0:7:2.22:7,2,0	1/1:19,0:17:20.35:176,20,0	1/1:16,0:15:20.97:135,21,0	1/1:7,0:7:2.66:38,3,0	1/1:26,1:24:34.61:375,35,0	1/1:21,2:17:45.13:544,45,0	1/1:14,0:14:24.81:249,25,0	1/1:5,0:4:4.96:23,5,0
chr10	33235636	.	AG	A	2091.76	PASS	AB=0.991;AC=42;AF=0.778;AN=54;BaseQRankSum=-0.327;DP=509;FS=20.260;HRun=1;HaplotypeScore=109.7033;InbreedingCoeff=0.3578;MQ=37.71;MQ0=52;MQRankSum=-1.054;QD=5.64;ReadPosRankSum=2.276;VQSLOD=-0.7257;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:10:5.56:30,6,0	1/1:7,0:7:10.82:58,11,0	0/0:44,0:5:9.48:0,9,89	0/0:62,0:8:20.72:0,21,247	1/1:12,0:12:1.71:12,2,0	1/1:13,1:11:0.45:1,0,0	./.	0/1:16,1:15:2.59:159,0,3	1/1:10,0:9:17.49:110,17,0	1/1:20,0:20:20.31:167,20,0	1/1:23,0:21:10.61:90,11,0	1/1:15,0:12:26.87:181,27,0	1/1:17,0:16:26.88:147,27,0	1/1:25,0:23:24.85:209,25,0	0/1:15,0:13:0.56:1,0,17	1/1:14,0:11:17.36:90,17,0	1/1:7,0:4:3.26:10,3,0	0/1:6,0:5:28.36:28,0,30	0/1:12,0:11:16.84:98,0,17	1/1:26,1:26:10.03:91,10,0	0/0:11,0:8:2.50:0,2,9	0/1:19,0:17:2.20:35,0,2	1/1:16,1:16:27.64:174,28,0	1/1:7,0:7:2.84:14,3,0	1/1:30,0:27:37.05:180,37,0	1/1:23,0:17:21.21:204,21,0	1/1:14,0:14:21.98:145,22,0	0/1:5,0:4:2.77:3,0,4
chr10	33235637	.	GA	G	5693.05	PASS	AB=0.840;AC=48;AF=0.889;AN=54;BaseQRankSum=-1.988;DP=507;FS=1.161;HRun=2;HaplotypeScore=99.4427;InbreedingCoeff=0.5056;MQ=37.89;MQ0=51;MQRankSum=2.210;QD=14.94;ReadPosRankSum=4.971;VQSLOD=4.7953;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,4:9:6.01:68,6,0	1/1:4,3:7:11.99:120,12,0	0/0:43,0:5:6.48:0,6,59	0/0:62,0:8:20.92:0,21,228	1/1:2,9:11:5.77:61,6,0	0/1:11,3:11:0.14:0,0,0	./.	1/1:4,13:15:33.11:419,33,0	1/1:1,8:8:18.05:218,18,0	1/1:19,0:20:44.07:427,44,0	1/1:11,13:22:21.49:239,21,0	1/1:4,11:12:26.55:325,27,0	1/1:6,11:16:29.85:313,30,0	1/1:5,20:23:35.07:437,35,0	1/1:8,7:13:19.61:122,20,0	1/1:5,9:11:20.89:208,21,0	1/1:3,4:4:3:27,3,0	0/1:5,1:5:11.75:84,0,12	1/1:6,7:12:23.46:290,23,0	1/1:13,14:26:37.65:365,38,0	1/1:7,3:7:2.84:14,3,0	1/1:10,11:19:25.43:204,25,0	1/1:3,14:16:27.97:349,28,0	1/1:1,6:7:2.84:38,3,0	1/1:17,12:26:40.68:450,41,0	1/1:6,17:17:45.08:517,45,0	1/1:4,10:14:32.97:353,33,0	1/1:5,0:4:5.80:44,6,0
chr10	33235638	.	A	AG	6191.44	PASS	AB=0.685;AC=48;AF=0.889;AN=54;BaseQRankSum=-2.199;DP=509;FS=2.963;HRun=1;HaplotypeScore=99.9430;InbreedingCoeff=0.5331;MQ=39.91;MQ0=51;MQRankSum=0.925;QD=16.25;ReadPosRankSum=5.096;VQSLOD=5.3359;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,10:10:5.99:70,6,0	1/1:7,1:8:10.93:98,11,0	0/0:43,0:4:6.48:0,6,59	0/0:64,0:10:21.30:0,21,229	1/1:11,0:11:5.79:86,6,0	0/1:5,8:10:0.03:0,0,0	./.	1/1:17,0:15:33.99:421,34,0	1/1:9,0:8:17.91:194,18,0	1/1:5,16:21:44.03:443,44,0	1/1:20,4:22:21.67:322,22,0	1/1:11,1:10:25.03:207,25,0	1/1:16,1:16:30.06:410,30,0	1/1:21,2:23:35.74:235,36,0	1/1:8,5:13:21.74:307,22,0	1/1:14,0:11:21.06:267,21,0	1/1:4,3:4:3.01:48,3,0	0/1:4,1:5:2.23:92,0,2	1/1:14,0:13:35.39:402,35,0	1/1:23,4:26:38.58:576,39,0	1/1:5,7:10:3.01:48,3,0	1/1:18,4:20:25.91:351,26,0	1/1:15,0:14:26.88:181,27,0	1/1:6,0:6:3.01:38,3,0	1/1:25,3:25:39.45:422,39,0	1/1:21,1:16:43.97:499,44,0	1/1:12,2:14:32.20:380,32,0	1/1:1,4:4:6.02:95,6,0
chr10	33236047	.	A	AG	1908.70	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-9.331;DP=587;FS=9.464;HRun=6;HaplotypeScore=62.3687;InbreedingCoeff=0.9967;MQ=86.70;MQ0=0;MQRankSum=-4.361;QD=29.82;ReadPosRankSum=0.736;VQSLOD=4.0024;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:45.09:0,45,459	0/0:9,0:9:27.06:0,27,275	0/0:19,0:19:41.98:0,42,388	0/0:23,0:23:57.08:0,57,565	0/0:26,0:26:75.16:0,75,764	0/0:26,0:26:72.14:0,72,727	0/0:12,0:12:33.04:0,33,323	0/0:29,0:29:69.14:0,69,699	0/0:17,0:17:51.10:0,51,510	0/0:25,0:25:69.15:0,69,703	0/0:19,0:19:51.11:0,51,515	1/1:0,17:17:42.13:528,42,0	0/0:25,0:25:69.14:0,69,697	1/1:1,17:18:48.15:604,48,0	0/0:30,0:30:84.19:0,84,856	0/0:28,0:28:75.17:0,75,765	0/0:12,0:12:36.08:0,36,367	0/0:10,0:10:24.05:0,24,245	0/0:22,0:22:59.85:0,60,601	0/0:34,0:34:87.18:0,87,880	0/0:26,0:26:69.15:0,69,704	0/0:20,0:20:54.10:0,54,544	1/1:2,13:15:39.12:484,39,0	1/1:0,14:14:36.12:453,36,0	0/0:33,0:33:96.11:0,96,951	0/0:24,0:24:69.16:0,69,704	0/0:29,0:29:81.18:0,81,826	0/0:6,0:6:18.04:0,18,184
chr10	33236821	.	C	CAAGAAGTTCTCAATAT	27659.23	PASS	AB=0.697;AC=54;AF=0.964;AN=56;BaseQRankSum=0.301;DP=298;FS=28.635;HRun=0;HaplotypeScore=345.7319;InbreedingCoeff=-0.0604;MQ=64.42;MQ0=0;MQRankSum=-2.810;QD=92.82;ReadPosRankSum=2.236;VQSLOD=3.4787;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:18:36.11:1721,36,0	1/1:6,0:6:14.88:606,15,0	0/1:2,0:5:19.26:618,0,19	0/1:7,1:10:32.38:1110,0,32	1/1:12,0:12:17.69:428,18,0	1/1:5,0:5:6.02:329,6,0	1/1:8,0:8:20.43:885,20,0	1/1:12,0:12:36.12:1916,36,0	1/1:18,0:18:26.42:1027,26,0	1/1:12,0:12:30.08:1255,30,0	1/1:9,0:9:24.08:879,24,0	1/1:8,0:8:23.78:803,24,0	1/1:13,0:13:24.55:1551,25,0	1/1:22,0:22:50.99:2246,51,0	1/1:13,0:13:27.05:1075,27,0	1/1:14,0:14:23.95:613,24,0	1/1:6,0:6:8.99:274,9,0	1/1:4,0:4:3.01:208,3,0	1/1:5,0:5:11.50:350,12,0	1/1:14,0:14:33.11:1828,33,0	1/1:8,0:8:21.03:836,21,0	1/1:16,0:16:35.87:1133,36,0	1/1:11,0:11:24.34:962,24,0	1/1:13,0:13:20.94:1007,21,0	1/1:7,0:7:12.04:681,12,0	1/1:15,0:15:34.67:1608,35,0	1/1:13,0:13:35.92:1503,36,0	1/1:1,0:1:3.01:210,3,0
chr10	33239808	.	GTAGGTAGA	G	604.07	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.799;DP=599;FS=0.000;HRun=0;HaplotypeScore=142.5240;InbreedingCoeff=0.8795;MQ=58.87;MQ0=4;MQRankSum=-6.152;QD=23.23;ReadPosRankSum=-0.054;VQSLOD=3.1009;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,102,2538	0/0:9,0:9:24.06:0,24,629	0/0:17,0:13:19.38:0,19,259	0/0:15,0:11:26.82:0,27,251	0/0:26,0:26:71.92:0,72,1465	0/0:23,0:23:42.03:0,42,903	0/0:17,0:17:40.31:0,40,652	0/0:43,0:42:99:0,107,854	0/0:19,0:19:57.12:0,57,1556	0/0:28,0:28:81.16:0,81,1945	0/0:27,0:27:51.06:0,51,959	0/0:13,0:13:26.85:0,27,511	0/0:14,0:14:42.02:0,42,847	0/0:23,0:22:45.07:0,45,1058	1/1:0,26:26:30.10:698,30,0	0/0:15,0:15:23.86:0,24,546	0/0:32,0:32:77.71:0,78,1871	0/0:10,0:10:11.06:0,11,617	0/0:25,0:22:57.03:0,57,1280	0/0:30,0:30:84.05:0,84,2506	0/0:19,0:19:48.06:0,48,1174	0/0:13,0:13:33.04:0,33,583	0/0:14,0:14:20.93:0,21,394	0/0:20,0:19:26.94:0,27,420	0/0:19,0:19:53.98:0,54,1237	0/0:31,0:31:9.81:0,10,1974	0/0:33,0:33:96.05:0,96,2136	0/0:4,0:4:12.04:0,12,482
chr10	33239812	.	G	GTAGA	1455.37	PASS	AB=0.819;AC=12;AF=0.231;AN=52;BaseQRankSum=-4.764;DP=600;FS=3.662;HRun=0;HaplotypeScore=101.0129;InbreedingCoeff=0.4771;MQ=57.80;MQ0=4;MQRankSum=1.500;QD=9.70;ReadPosRankSum=0.018;VQSLOD=2.9052;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:56.65:0,57,756	0/0:9,0:9:9.03:0,9,137	./.	./.	0/0:26,0:26:35.95:0,36,416	1/1:9,14:26:18.06:402,18,0	0/1:19,0:19:72.99:119,0,73	0/0:43,0:42:14.78:0,15,115	0/0:19,0:19:36.04:0,36,469	0/0:26,0:26:39.05:0,39,517	0/0:24,0:24:20.90:0,21,205	1/1:8,6:14:9.03:211,9,0	0/0:15,0:15:21.02:0,21,258	0/1:12,13:25:28.32:334,0,28	0/0:26,0:26:21.01:0,21,190	0/1:6,9:15:34.44:166,0,34	0/0:33,0:33:38.42:0,38,583	0/0:10,0:10:14.89:0,15,177	0/0:24,0:21:27.07:0,27,360	0/0:28,0:28:57.15:0,57,814	0/1:18,0:18:31.95:32,0,235	0/0:13,0:13:8.99:0,9,113	1/1:6,7:14:9.03:211,9,0	1/1:9,9:17:6.02:141,6,0	0/0:20,0:20:30.04:0,30,383	0/0:31,0:32:32.12:0,32,607	0/0:32,0:32:50.97:0,51,604	0/0:4,0:4:12.01:0,12,124
chr10	33239974	.	TAGAC	T	330.20	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.839;DP=637;FS=1.240;HRun=0;HaplotypeScore=101.2876;InbreedingCoeff=0.9141;MQ=63.85;MQ0=2;MQRankSum=-1.123;QD=17.38;ReadPosRankSum=0.829;VQSLOD=3.0446;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,14:19:27.01:424,27,0	0/0:9,0:9:24.08:0,24,599	0/0:23,0:18:35.09:0,35,552	0/0:25,0:21:32.22:0,32,615	0/0:51,0:51:99:0,138,3108	0/0:17,0:17:39.06:0,39,769	0/0:11,0:11:24.01:0,24,396	0/0:40,0:40:75.15:0,75,1278	0/0:20,0:20:45.11:0,45,972	0/0:35,0:35:81.26:0,81,1841	0/0:27,0:27:63.17:0,63,1394	0/0:16,0:16:39.11:0,39,832	0/0:22,0:22:51.16:0,51,1195	0/0:22,0:22:54.15:0,54,1193	0/0:23,0:23:48.15:0,48,1145	0/0:18,0:18:48.11:0,48,993	0/0:9,0:9:9.50:0,10,226	0/0:7,0:7:11.99:0,12,243	0/0:19,0:17:36.08:0,36,645	0/0:39,0:39:96.25:0,96,2143	0/0:17,0:17:42.07:0,42,790	0/0:22,0:22:57.20:0,57,1414	0/0:34,0:34:84.18:0,84,1744	0/0:14,0:14:21.03:0,21,421	0/0:27,0:27:60.19:0,60,1383	0/0:22,0:22:57.16:0,57,1254	0/0:33,0:32:84.24:0,84,1935	0/0:15,0:15:45.12:0,45,983
chr10	33240123	.	G	GT	563.08	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=1.686;DP=585;FS=0.816;HRun=8;HaplotypeScore=58.3307;InbreedingCoeff=0.8784;MQ=72.31;MQ0=0;MQRankSum=0.844;QD=28.15;ReadPosRankSum=0.645;VQSLOD=4.1383;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:51.03:0,51,466	0/0:10,0:10:27.01:0,27,247	0/0:20,0:14:6.89:0,7,84	0/0:25,0:20:32.20:0,32,270	0/0:27,0:26:78.03:0,78,710	0/0:15,0:15:39.02:0,39,357	0/0:16,0:16:44.99:0,45,401	0/0:44,0:44:92.92:0,93,824	0/0:27,0:28:77.08:0,77,692	0/0:29,0:29:81.02:0,81,732	0/0:27,0:27:75.04:0,75,686	0/0:17,0:17:42.02:0,42,384	0/0:24,0:24:69.02:0,69,626	0/0:19,0:19:57.03:0,57,522	1/1:1,19:20:57.17:658,57,0	0/0:16,0:16:45.02:0,45,412	0/0:10,0:10:24.01:0,24,219	0/0:10,0:10:27.01:0,27,247	0/0:17,0:17:45.02:0,45,412	0/0:38,0:38:96.05:0,96,878	0/0:4,0:4:12.01:0,12,110	0/0:22,0:22:57.01:0,57,517	0/0:18,1:19:16.44:0,16,405	0/0:20,0:20:54.02:0,54,494	0/0:32,0:32:87.04:0,87,796	0/0:24,0:24:68.71:0,69,615	0/0:25,0:24:69.04:0,69,631	0/0:10,0:10:24.01:0,24,220
chr10	33240792	.	G	GC	5019.17	PASS	AC=52;AF=1.000;AN=52;DP=158;FS=0.000;HRun=0;HaplotypeScore=237.7278;InbreedingCoeff=0.0834;MQ=35.27;MQ0=0;QD=31.97;VQSLOD=3.8989;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,2:2:4.56:36,5,0	1/1:0,7:7:21.06:245,21,0	./.	./.	1/1:0,9:9:26.69:233,27,0	1/1:0,6:6:18.05:197,18,0	1/1:0,5:5:12.92:130,13,0	1/1:0,11:11:31.34:386,31,0	1/1:0,7:7:21.05:226,21,0	1/1:0,13:13:39.06:486,39,0	1/1:0,4:4:12.02:121,12,0	1/1:0,6:6:18.05:194,18,0	1/1:0,6:6:18.05:195,18,0	1/1:0,4:4:12.03:126,12,0	1/1:0,8:8:24.06:256,24,0	1/1:1,5:6:18.05:196,18,0	1/1:0,1:1:2.04:6,2,0	1/1:0,1:1:3.01:30,3,0	1/1:0,3:3:9.03:123,9,0	1/1:0,9:9:26.44:270,26,0	1/1:0,1:1:3:29,3,0	1/1:0,10:10:30.05:307,30,0	1/1:0,7:7:21.04:212,21,0	1/1:0,3:3:5.80:56,6,0	1/1:0,8:8:24.06:256,24,0	1/1:0,8:8:24.08:315,24,0	1/1:0,9:10:29.91:320,30,0	1/1:0,2:2:6.02:70,6,0
chr10	33240797	.	AT	A	4092.31	PASS	AC=52;AF=1.000;AN=52;BaseQRankSum=0.111;DP=158;FS=0.000;HRun=1;HaplotypeScore=241.1549;InbreedingCoeff=0.1945;MQ=35.27;MQ0=0;MQRankSum=-1.221;QD=26.07;ReadPosRankSum=1.044;VQSLOD=3.0716;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,2:2:3.47:27,3,0	1/1:0,7:7:21.02:203,21,0	./.	./.	1/1:0,9:9:25.85:181,26,0	1/1:0,6:6:18.01:161,18,0	1/1:0,5:5:11.87:104,12,0	1/1:0,11:11:30.54:323,31,0	1/1:0,7:7:21:184,21,0	1/1:0,13:13:38.84:406,39,0	1/1:0,4:4:11.97:97,12,0	1/1:0,6:6:18:158,18,0	1/1:0,6:6:18:160,18,0	1/1:0,4:4:11.99:102,12,0	1/1:0,8:8:24:208,24,0	1/1:0,6:6:18.01:161,18,0	1/1:0,1:1:1.82:5,2,0	1/1:0,1:1:3:27,3,0	1/1:0,3:3:9.03:105,9,0	1/1:0,9:9:25.25:217,25,0	1/1:0,1:1:1.82:5,2,0	1/1:0,10:10:29.91:247,30,0	1/1:0,7:7:20.96:170,21,0	1/1:0,3:3:5.25:43,5,0	1/1:0,8:8:24:209,24,0	1/1:0,8:8:24.07:266,24,0	1/1:0,10:10:29.89:267,30,0	1/1:0,2:2:6.01:58,6,0
chr10	33240814	.	C	CA	3532.11	PASS	AC=48;AF=1.000;AN=48;BaseQRankSum=2.969;DP=200;FS=0.000;HRun=1;HaplotypeScore=327.1786;InbreedingCoeff=0.0631;MQ=33.97;MQ0=0;MQRankSum=-1.156;QD=17.84;ReadPosRankSum=2.620;VQSLOD=2.7122;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,2:2:5.14:24,5,0	1/1:1,6:7:20.73:164,21,0	./.	./.	1/1:3,8:11:26.92:195,27,0	1/1:1,8:9:23.56:145,24,0	1/1:1,4:5:13.49:73,13,0	1/1:9,10:19:15.56:174,16,0	1/1:1,5:6:17.81:147,18,0	1/1:5,9:14:30.56:192,31,0	1/1:0,8:8:23.49:142,23,0	1/1:1,4:5:11.77:71,12,0	1/1:0,8:8:23.58:160,24,0	1/1:0,8:8:23.46:137,23,0	1/1:1,9:10:29.63:236,30,0	1/1:3,5:8:23.71:182,24,0	1/1:0,1:1:2.60:10,3,0	1/1:0,2:2:5.97:44,6,0	1/1:1,4:5:10.55:88,11,0	1/1:1,11:12:34.87:222,35,0	./.	1/1:2,9:11:28.90:201,29,0	1/1:1,10:11:32.08:203,32,0	1/1:1,3:4:6.21:32,6,0	1/1:2,5:8:23.25:160,23,0	1/1:3,9:12:32.82:252,33,0	1/1:2,10:12:35.56:277,36,0	./.
chr10	33240819	.	AT	A	1826.08	PASS	AC=48;AF=1.000;AN=48;BaseQRankSum=1.914;DP=160;FS=0.000;HRun=1;HaplotypeScore=278.4960;InbreedingCoeff=0.1807;MQ=35.10;MQ0=0;MQRankSum=-0.487;QD=11.48;ReadPosRankSum=-0.113;VQSLOD=1.9167;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,2:2:2.73:12,3,0	1/1:0,6:6:15.12:73,15,0	./.	./.	1/1:0,8:8:15.12:65,15,0	1/1:0,8:8:22.45:106,22,0	1/1:0,4:4:7.62:37,8,0	1/1:0,10:10:23.37:139,23,0	1/1:0,5:5:12.16:56,12,0	1/1:0,9:9:21.34:116,21,0	1/1:0,8:8:22.15:101,22,0	1/1:0,4:4:11.19:52,11,0	1/1:0,8:8:20.75:92,21,0	1/1:0,8:8:22.16:99,22,0	1/1:0,9:9:22.11:97,22,0	1/1:0,5:5:14.26:71,14,0	1/1:0,1:1:1.55:4,2,0	1/1:0,2:2:5.87:35,6,0	1/1:0,4:4:5.86:38,6,0	1/1:0,11:11:27.29:123,27,0	./.	1/1:0,9:9:22.38:93,22,0	1/1:0,10:10:27:117,27,0	1/1:0,3:3:4.23:20,4,0	1/1:0,6:6:17.04:83,17,0	1/1:0,9:9:26.29:150,26,0	1/1:0,10:10:25.35:126,25,0	./.
chr10	33241649	.	ATTCTTTT	A	5552.56	PASS	AB=0.524;AC=7;AF=0.125;AN=56;BaseQRankSum=11.692;DP=689;FS=22.010;HRun=0;HaplotypeScore=168.4018;InbreedingCoeff=0.8207;MQ=74.06;MQ0=0;MQRankSum=-13.699;QD=56.66;ReadPosRankSum=0.876;VQSLOD=3.2864;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,163,5294	0/0:10,0:10:30.10:0,30,1062	0/0:21,0:21:49.72:0,50,1782	0/0:14,0:14:34.67:0,35,1222	0/0:23,0:23:66.21:0,66,2516	0/0:23,0:23:69.24:0,69,2741	0/0:24,0:24:66.23:0,66,2603	0/0:37,0:37:99:0,99,3922	0/0:19,0:19:57.20:0,57,2303	0/0:19,0:19:57.20:0,57,2233	0/0:19,0:19:51.18:0,51,1992	1/1:5,24:29:69.24:1795,69,0	0/0:31,0:31:90.31:0,90,3533	1/1:3,31:34:72.25:1871,72,0	0/0:38,0:38:99:0,114,4468	0/0:38,0:38:99:0,114,4461	0/0:41,0:41:99:0,123,4818	0/0:18,0:18:51.18:0,51,2058	0/0:17,0:17:51.18:0,51,1985	0/0:38,0:38:99:0,114,4478	0/0:20,0:20:54.16:0,54,2050	0/0:11,0:11:30.10:0,30,1207	1/1:0,13:13:36.12:896,36,0	0/1:2,20:22:73.02:992,0,73	0/0:26,0:26:78.27:0,78,3078	0/0:20,0:20:57.06:0,57,2015	0/0:27,0:27:78.24:0,78,2839	0/0:3,0:3:9.03:0,9,363
chr10	33243279	.	C	CCCCTTAT	2384.88	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=0.505;DP=698;FS=8.681;HRun=0;HaplotypeScore=182.0523;InbreedingCoeff=0.9047;MQ=82.12;MQ0=0;MQRankSum=-7.709;QD=72.27;ReadPosRankSum=-2.423;VQSLOD=3.0591;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,20:33:69.24:2480,69,0	0/0:14,0:14:33.10:0,33,753	0/0:19,0:19:54.19:0,54,1290	0/0:31,0:31:78.26:0,78,1827	0/0:29,0:29:84.29:0,84,2060	0/0:18,0:18:51.18:0,51,1268	0/0:20,0:19:54.15:0,54,1183	0/0:31,0:31:78.24:0,78,1751	0/0:29,0:29:66.21:0,66,1566	0/0:22,0:22:66.23:0,66,1619	0/0:15,0:15:39.13:0,39,969	0/0:38,0:38:99:0,102,2387	0/0:26,0:26:66.21:0,66,1589	0/0:15,0:15:36.12:0,36,895	0/0:31,0:31:84.27:0,84,2037	0/0:41,0:41:99:0,114,2733	0/0:16,0:15:42.14:0,42,1044	0/0:13,0:13:33.07:0,33,755	0/0:21,0:21:48.15:0,48,1139	0/0:26,0:26:66.23:0,66,1603	0/0:40,0:40:99:0,108,2614	0/0:35,0:35:93.31:0,93,2232	0/0:31,0:31:93.32:0,93,2259	0/0:18,0:18:51.13:0,51,1213	0/0:30,0:30:78.26:0,78,1888	0/0:21,0:21:60.21:0,60,1463	0/0:33,0:33:78.24:0,78,1879	0/0:2,0:2:6.02:0,6,149
chr10	33243456	.	CAGCCA	C	12187.16	PASS	AB=0.541;AC=29;AF=0.518;AN=56;BaseQRankSum=20.159;DP=613;FS=2.106;HRun=0;HaplotypeScore=267.5951;InbreedingCoeff=0.9074;MQ=81.55;MQ0=0;MQRankSum=-18.681;QD=50.78;ReadPosRankSum=6.487;VQSLOD=4.8790;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,157,5059	1/1:1,7:8:24.08:425,24,0	0/0:24,0:24:72.23:0,72,2247	0/0:25,0:25:75.26:0,75,2381	0/0:26,0:26:78.27:0,78,2517	0/0:21,0:21:60.21:0,60,1891	0/0:21,0:21:63.22:0,63,2039	1/1:1,3:4:12.04:195,12,0	0/0:25,0:25:75.26:0,75,2440	1/1:0,24:26:78.21:1381,78,0	1/1:0,19:19:57.19:976,57,0	0/0:31,0:31:93.32:0,93,3048	1/1:2,26:29:87.28:1539,87,0	0/0:27,0:27:78.25:0,78,2506	0/0:38,0:38:99:0,114,3696	0/1:3,17:20:39.77:930,0,40	0/0:36,0:36:99:0,108,3517	1/1:1,5:6:18.06:312,18,0	1/1:1,6:10:26.85:401,27,0	1/1:1,23:24:72.24:1219,72,0	1/1:0,2:6:6.02:107,6,0	1/1:1,10:11:33.11:584,33,0	0/0:13,0:13:39.13:0,39,1299	0/0:33,0:33:99:0,99,3283	1/1:0,18:18:54.18:936,54,0	1/1:0,14:16:48.15:852,48,0	1/1:1,36:37:99:2003,111,0	1/1:0,6:6:18.06:328,18,0
chr10	33243462	.	TA	T	1852.34	PASS	AB=0.514;AC=29;AF=0.518;AN=56;BaseQRankSum=20.355;DP=605;FS=1.344;HRun=1;HaplotypeScore=247.7986;InbreedingCoeff=0.8986;MQ=80.34;MQ0=0;MQRankSum=-20.198;QD=8.42;ReadPosRankSum=8.321;VQSLOD=0.7770;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,160,2521	1/1:0,7:7:18.04:68,18,0	0/0:24,0:24:72.23:0,72,1091	0/0:25,0:25:75.25:0,75,1156	0/0:27,0:27:78.25:0,78,1222	0/0:19,0:19:57.19:0,57,907	0/0:24,0:24:72.21:0,72,1099	1/1:0,3:3:8.04:32,8,0	0/0:26,0:26:78.26:0,78,1221	1/1:0,24:24:63.18:252,63,0	1/1:0,19:19:47.44:171,47,0	0/0:33,0:33:99:0,99,1551	1/1:2,25:27:68.70:260,69,0	0/0:26,0:26:75.26:0,75,1196	0/0:39,0:39:99:0,117,1841	0/1:1,17:18:1.66:116,0,2	0/0:35,0:35:99:0,105,1660	1/1:0,5:5:1.99:35,2,0	1/1:0,6:6:16.07:64,16,0	1/1:0,23:23:57.30:211,57,0	1/1:0,2:2:5.09:19,5,0	1/1:0,10:10:25.56:96,26,0	0/0:18,0:18:54.17:0,54,837	0/0:34,0:35:99:0,102,1600	1/1:0,18:18:45.27:168,45,0	1/1:2,14:16:39.01:152,39,0	1/1:0,36:36:93.22:366,93,0	1/1:0,6:6:15.82:63,16,0
chr10	33243465	.	TGGGTTCCTA	T	17249.99	PASS	AB=0.514;AC=29;AF=0.518;AN=56;BaseQRankSum=20.434;DP=607;FS=0.304;HRun=0;HaplotypeScore=296.8910;InbreedingCoeff=0.9013;MQ=81.35;MQ0=0;MQRankSum=-20.244;QD=78.77;ReadPosRankSum=8.052;VQSLOD=3.9032;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:56:99:0,169,7815	1/1:1,6:7:21.07:560,21,0	0/0:25,0:25:72.12:0,72,2976	0/0:27,0:27:81.25:0,81,3165	0/0:27,0:27:81.28:0,81,4095	0/0:19,0:19:57.18:0,57,2691	0/0:23,0:23:69.24:0,69,3347	1/1:0,3:3:9.03:244,9,0	0/0:26,0:26:78.27:0,78,3861	1/1:0,24:24:72.25:1947,72,0	1/1:0,19:19:57.19:1380,57,0	0/0:34,0:34:99:0,102,4937	1/1:1,25:27:81.28:2164,81,0	0/0:24,0:24:72.25:0,72,3557	0/0:39,0:39:99:0,117,5850	0/1:1,17:18:97.77:1318,0,98	0/0:35,0:35:99:0,105,4810	1/1:0,5:5:15.05:385,15,0	1/1:0,6:6:18.06:488,18,0	1/1:0,23:23:69.24:1786,69,0	1/1:0,2:2:6.02:161,6,0	1/1:0,10:10:30.10:805,30,0	0/0:18,0:18:54.19:0,54,2587	0/0:35,0:35:99:0,102,4945	1/1:0,18:18:54.19:1392,54,0	1/1:0,14:15:45.15:1208,45,0	1/1:0,36:36:99:2923,108,0	1/1:0,6:6:18.06:490,18,0
chr10	33244595	.	T	TA	8707.18	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-9.938;DP=693;FS=6.170;HRun=9;HaplotypeScore=111.3258;InbreedingCoeff=0.9948;MQ=79.19;MQ0=1;MQRankSum=-0.750;QD=25.09;ReadPosRankSum=0.272;VQSLOD=4.0799;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,123,1057	1/1:2,10:12:27.07:299,27,0	0/0:22,0:23:22.62:0,23,259	0/0:14,0:13:32.67:0,33,245	0/0:6,0:41:71.29:0,71,210	0/0:2,0:18:32.59:0,33,96	0/0:1,0:26:46.85:0,47,138	1/1:5,30:35:90.18:959,90,0	0/0:2,0:26:48.89:0,49,144	1/1:5,20:25:36.49:569,36,0	1/1:6,11:17:12.90:353,13,0	0/0:6,0:32:56.73:0,57,183	1/1:4,34:38:93.23:1017,93,0	0/0:2,0:26:36.66:0,37,108	0/0:30,0:31:76.98:0,77,652	1/1:5,20:25:31.11:571,31,0	0/0:4,0:31:48.88:0,49,144	1/1:4,7:13:26.74:261,27,0	1/1:3,19:22:57.12:611,57,0	1/1:7,25:32:52.12:790,52,0	1/1:3,15:18:42.11:465,42,0	1/1:4,20:24:23.11:517,23,0	0/0:3,0:18:30.55:0,31,90	0/0:0,0:15:28.52:0,29,84	1/1:3,14:18:41.95:446,42,0	1/1:4,21:25:37.10:627,37,0	1/1:3,30:34:90.17:970,90,0	1/1:2,7:9:24.03:253,24,0
chr10	33245659	.	ATC	A	683.68	PASS	AB=1.000;AC=12;AF=0.214;AN=56;BaseQRankSum=1.674;DP=653;FS=15.130;HRun=0;HaplotypeScore=142.8840;InbreedingCoeff=0.4685;MQ=73.60;MQ0=6;MQRankSum=1.464;QD=4.35;ReadPosRankSum=4.914;VQSLOD=1.8592;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:13.11:0,13,109	0/0:8,0:8:3:0,3,25	0/0:35,0:27:53.18:0,53,695	0/0:41,0:31:33.13:0,33,762	0/0:27,0:27:6.37:0,6,35	0/1:34,0:33:7.17:7,0,72	0/0:22,0:22:3.88:0,4,25	0/0:31,0:30:27.45:0,27,180	0/0:22,0:20:8.80:0,9,58	0/0:29,0:28:22.66:0,23,166	1/1:20,0:20:4.56:13,5,0	1/1:17,0:17:18:211,18,0	0/0:24,0:24:4.78:0,5,48	1/1:28,0:27:50.86:506,51,0	0/0:19,0:19:30.08:0,30,425	0/0:20,0:20:7.81:0,8,42	0/0:24,0:24:22.72:0,23,149	0/0:9,0:8:7.88:0,8,63	0/0:27,0:27:11.11:0,11,74	1/1:18,0:18:1.13:4,1,0	0/0:20,0:20:3.94:0,4,26	0/1:30,0:30:12.50:12,0,18	0/0:13,15:26:0.89:0,1,2	1/1:10,0:10:6.02:76,6,0	0/0:22,0:22:3.32:0,3,11	0/0:20,0:20:15.96:0,16,115	0/0:23,0:23:7.52:0,8,48	0/0:15,0:13:2.29:0,2,16
chr10	33245707	.	CTGTGTGTGTGTGTGTG	C	3941.48	PASS	AB=0.657;AC=25;AF=0.568;AN=44;BaseQRankSum=1.230;DP=455;FS=3.973;HRun=0;HaplotypeScore=183.7644;InbreedingCoeff=0.4693;MQ=37.69;MQ0=24;MQRankSum=-5.539;QD=17.06;ReadPosRankSum=2.587;VQSLOD=1.9436;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:21:18.02:0,18,248	1/1:1,7:8:9.03:367,9,0	./.	./.	0/1:12,0:22:0:0,0,0	1/1:13,0:25:6.02:219,6,0	1/1:11,0:18:3.01:117,3,0	0/0:25,0:22:0:0,0,0	1/1:10,0:16:5.64:230,6,0	1/1:12,0:11:3.01:125,3,0	./.	0/0:21,0:21:18.53:0,19,435	0/1:10,8:19:99:736,0,124	0/0:28,0:27:28.91:0,29,636	./.	1/1:8,8:18:7.99:372,8,0	0/1:6,0:14:10.18:108,0,10	1/1:5,0:8:3.01:118,3,0	1/1:9,0:15:17.75:547,18,0	1/1:7,11:17:3.01:108,3,0	0/0:12,4:10:0.89:0,1,2	./.	0/0:19,0:18:6.02:0,6,123	0/0:17,0:15:12.04:0,12,471	./.	1/1:11,0:12:9.03:360,9,0	1/1:10,6:14:14.98:535,15,0	0/0:7,0:4:2.96:0,3,19
chr10	33246730	.	C	CATCT	11149.96	PASS	AB=0.835;AC=41;AF=0.759;AN=54;BaseQRankSum=-6.214;DP=687;FS=3.609;HRun=0;HaplotypeScore=137.6858;InbreedingCoeff=0.6539;MQ=59.38;MQ0=3;MQRankSum=1.262;QD=19.88;ReadPosRankSum=-0.730;VQSLOD=4.6190;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:23:10.97:0,11,133	1/1:3,14:18:24.08:571,24,0	0/1:14,0:13:0:0,0,0	./.	1/1:13,0:28:2.99:25,3,0	1/1:9,0:28:0.47:1,0,0	1/1:23,0:23:12.44:70,12,0	1/1:39,0:36:30.95:606,31,0	1/1:8,0:32:8.70:115,9,0	1/1:9,17:28:54.19:1204,54,0	1/1:12,8:20:36.11:765,36,0	0/0:11,0:23:26.17:0,26,274	1/1:18,12:30:51.14:1105,51,0	0/0:21,0:21:45.14:0,45,681	1/1:22,0:43:12.04:35,12,0	1/1:8,22:30:42.14:999,42,0	1/1:17,0:17:12.61:132,13,0	0/1:12,8:20:32.27:246,0,32	1/1:12,5:18:21.07:453,21,0	1/1:18,11:29:42.14:931,42,0	1/1:4,14:19:33.11:785,33,0	0/1:14,2:19:17.05:359,0,17	0/0:28,0:28:47.87:0,48,727	0/0:15,0:15:15.79:0,16,271	1/1:13,16:30:33.11:785,33,0	1/1:16,9:27:45.15:975,45,0	1/1:14,16:30:39.13:916,39,0	1/1:8,4:12:3.01:71,3,0
chr10	33246765	.	C	CT	632.12	PASS	AB=0.940;AC=11;AF=0.196;AN=56;BaseQRankSum=12.292;DP=641;FS=1.137;HRun=1;HaplotypeScore=120.4867;InbreedingCoeff=-0.1810;MQ=57.27;MQ0=2;MQRankSum=1.281;QD=2.68;ReadPosRankSum=2.910;VQSLOD=-0.1459;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:23.02:0,23,266	0/1:14,0:14:14.32:14,0,28	0/0:15,0:10:21.06:0,21,280	0/0:12,0:11:30.10:0,30,419	0/0:23,0:22:28.81:0,29,455	0/0:17,0:17:27.54:0,28,361	0/1:15,6:19:99:202,0,249	0/1:33,6:36:99:107,0,1037	0/1:30,0:30:12.58:13,0,171	0/1:24,0:24:10.06:10,0,334	0/1:25,0:25:99:171,0,328	0/0:19,0:19:44.02:0,44,465	0/0:35,0:35:3.33:0,3,692	0/0:32,0:32:90.30:0,90,1258	0/0:31,4:35:0.05:0,0,226	0/0:32,0:32:6.19:0,6,456	0/1:20,3:22:77.69:78,0,318	0/0:18,0:18:18.69:0,19,344	0/0:12,0:12:10.24:0,10,220	0/1:22,1:23:82.35:82,0,301	0/0:28,0:28:13.52:0,14,486	0/0:19,0:19:33.50:0,33,514	0/0:25,0:25:68.87:0,69,946	0/0:13,0:13:33.09:0,33,455	0/0:23,0:23:0.08:0,0,281	0/1:32,1:33:86.61:87,0,634	0/0:26,0:26:1.78:0,2,304	1/1:4,0:4:1.25:3,1,0
chr10	33246802	.	A	ATTTG	948.92	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=0.901;DP=681;FS=0.859;HRun=0;HaplotypeScore=145.4907;InbreedingCoeff=0.8864;MQ=73.96;MQ0=1;MQRankSum=-2.796;QD=43.13;ReadPosRankSum=-0.985;VQSLOD=3.9170;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,17:22:54:1044,54,0	0/0:6,0:6:15.04:0,15,245	0/0:26,0:27:33.48:0,33,683	0/0:20,0:18:18.61:0,19,604	0/0:23,0:22:57.20:0,57,1040	0/0:23,0:23:54.19:0,54,990	0/0:19,0:19:45.14:0,45,791	0/0:33,0:33:90.29:0,90,1585	0/0:28,0:28:54.19:0,54,990	0/0:24,0:24:60.09:0,60,1032	0/0:22,0:22:57.16:0,57,980	0/0:24,0:24:72.23:0,72,1284	0/0:41,0:41:99:0,120,2151	0/0:32,0:32:96.33:0,96,1765	0/0:32,0:32:57.20:0,57,1047	0/0:40,0:40:99:0,99,1689	0/0:26,0:24:60.20:0,60,1095	0/0:17,0:17:42.07:0,42,704	0/0:15,0:15:38.34:0,38,637	0/0:21,0:21:60.19:0,60,1072	0/0:30,0:30:78.24:0,78,1401	0/0:31,0:31:93.32:0,93,1710	0/0:20,0:20:54.19:0,54,985	0/0:19,0:19:54.19:0,54,992	0/0:17,0:17:39.13:0,39,717	0/0:28,0:28:84.26:0,84,1454	0/0:36,0:35:90.17:0,90,1454	0/0:5,0:5:6.02:0,6,110
chr10	33247019	.	ATGTGTG	A	508.59	PASS	AB=0.963;AC=13;AF=0.260;AN=50;BaseQRankSum=1.376;DP=607;FS=11.496;HRun=0;HaplotypeScore=122.4666;InbreedingCoeff=0.5364;MQ=63.47;MQ0=10;MQRankSum=-4.139;QD=3.53;ReadPosRankSum=0.743;VQSLOD=1.3114;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:26:8.97:0,9,124	0/0:9,0:9:6:0,6,52	./.	./.	1/1:19,3:22:5.93:78,6,0	1/1:21,6:29:11.59:204,12,0	1/1:18,3:22:8.57:162,9,0	0/0:40,0:40:15.84:0,16,175	1/1:13,2:15:3.01:60,3,0	0/0:24,0:25:6.01:0,6,64	0/0:9,0:9:3:0,3,27	0/0:28,0:28:18.53:0,19,494	1/1:8,0:9:2.79:13,3,0	0/0:22,0:22:12.03:0,12,270	0/0:8,0:12:9:0,9,80	0/0:18,0:23:21.03:0,21,245	1/1:15,5:21:5.85:121,6,0	0/0:7,0:7:6.02:0,6,162	0/0:19,0:18:3:0,3,27	0/0:22,0:22:3.01:0,3,43	0/0:43,0:42:27.08:0,27,574	./.	0/0:32,0:32:8.70:0,9,213	0/0:23,0:23:9.03:0,9,232	0/0:15,0:20:11.97:0,12,102	0/0:23,0:23:9.03:0,9,205	0/1:25,0:26:18.62:19,0,655	0/0:11,0:9:9.03:0,9,162
chr10	33247067	.	G	GTGTA	5462.15	PASS	AB=1.000;AC=42;AF=0.750;AN=56;BaseQRankSum=-5.527;DP=588;FS=14.454;HRun=0;HaplotypeScore=103.4405;InbreedingCoeff=0.7065;MQ=64.51;MQ0=24;MQRankSum=0.634;QD=12.61;ReadPosRankSum=1.337;VQSLOD=3.5568;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:31,0:31:66.31:546,66,0	1/1:5,0:5:11.59:85,12,0	0/0:51,0:13:16.63:0,17,162	0/1:55,0:17:6.10:6,0,138	0/0:15,0:15:23.71:0,24,208	0/0:25,0:25:59.93:0,60,544	0/0:26,0:26:68.63:0,69,576	1/1:15,0:15:44.87:375,45,0	0/0:13,0:13:32.94:0,33,280	1/1:17,0:17:43.80:406,44,0	1/1:11,0:11:21.95:177,22,0	1/1:4,26:32:12.03:273,12,0	1/1:14,0:13:25.07:218,25,0	1/1:3,0:18:3:26,3,0	1/1:18,0:18:33.20:294,33,0	1/1:22,0:22:37.96:342,38,0	0/0:25,0:25:59.63:0,60,494	1/1:10,0:10:6.07:163,6,0	1/1:17,0:17:47.92:410,48,0	1/1:17,0:16:35.90:291,36,0	1/1:30,0:30:19.99:430,20,0	1/1:22,0:22:58.82:465,59,0	1/1:6,0:26:2.55:24,3,0	1/1:3,16:23:9.02:191,9,0	1/1:10,0:10:7.99:113,8,0	1/1:13,0:13:32.87:269,33,0	0/1:24,0:24:56.75:312,0,57	1/1:3,0:2:5.99:49,6,0
chr10	33247827	.	G	GA	1240.62	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-7.960;DP=610;FS=6.116;HRun=8;HaplotypeScore=60.4201;InbreedingCoeff=0.9939;MQ=84.64;MQ0=0;MQRankSum=-1.844;QD=26.40;ReadPosRankSum=1.061;VQSLOD=4.4897;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:69.03:0,69,632	0/0:9,0:9:24.01:0,24,220	0/0:30,0:30:62.79:0,63,549	0/0:15,0:15:34.77:0,35,292	1/1:7,40:47:99:1335,117,0	0/0:29,0:29:78.04:0,78,714	0/0:11,0:11:24.01:0,24,220	0/0:30,0:30:75.01:0,75,679	0/0:23,0:23:57.01:0,57,517	0/0:34,0:34:90.04:0,90,824	0/0:20,0:20:51.01:0,51,462	0/0:21,0:21:54:0,54,489	0/0:29,0:29:84.03:0,84,763	0/0:12,0:12:33:0,33,298	0/0:21,0:21:57.03:0,57,522	0/0:25,0:25:57.02:0,57,522	0/0:13,0:13:27:0,27,247	0/0:14,0:14:36.01:0,36,329	0/0:17,0:17:44.97:0,45,399	0/0:27,0:28:83.08:0,83,747	0/0:20,0:20:57.03:0,57,522	0/0:27,0:27:75.04:0,75,686	0/0:23,0:23:60.02:0,60,545	0/0:13,0:13:33.01:0,33,302	0/0:20,0:20:51.02:0,51,467	0/0:18,0:18:54.03:0,54,494	0/0:25,0:24:72.03:0,72,658	0/0:12,0:12:36.02:0,36,329
chr10	33250115	.	C	CA	424.56	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-4.334;DP=673;FS=0.000;HRun=9;HaplotypeScore=75.5711;InbreedingCoeff=0.8648;MQ=61.82;MQ0=5;MQRankSum=-0.057;QD=16.98;ReadPosRankSum=0.032;VQSLOD=3.6508;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:49:99:0,120,1035	0/0:16,0:16:44.91:0,45,391	0/0:7,0:5:11.99:0,12,104	0/0:11,0:9:23.95:0,24,202	0/0:28,0:28:71.96:0,72,625	0/0:16,1:17:14.81:0,15,357	0/0:25,0:25:59.93:0,60,513	0/0:38,1:39:74.79:0,75,869	0/0:19,0:19:50.98:0,51,443	0/0:25,0:25:70.92:0,71,595	0/0:27,1:28:38.83:0,39,566	0/0:14,0:14:35.99:0,36,313	0/0:27,0:28:74.01:0,74,630	0/0:18,0:20:50.01:0,50,422	1/1:6,19:25:48.97:519,49,0	0/0:29,0:29:71.93:0,72,622	0/0:44,1:44:74.79:0,75,878	0/0:22,0:22:43.73:0,44,361	0/0:15,0:15:38.97:0,39,335	0/0:25,0:25:62.19:0,62,524	0/0:20,0:20:48.54:0,49,461	0/0:18,0:19:50.02:0,50,423	0/0:26,0:26:71.97:0,72,621	0/0:24,0:24:62.92:0,63,533	0/0:27,1:28:29.79:0,30,483	0/0:36,0:34:86.94:0,87,748	0/0:28,0:28:71.97:0,72,620	0/0:2,0:2:6:0,6,52
chr10	33251736	.	TA	T	3419.45	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=8.944;DP=696;FS=1.341;HRun=4;HaplotypeScore=71.1375;InbreedingCoeff=0.9975;MQ=85.83;MQ0=0;MQRankSum=-1.568;QD=32.57;ReadPosRankSum=1.530;VQSLOD=4.2921;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:63.21:0,63,882	0/0:12,0:12:33.08:0,33,442	0/0:25,0:25:69.21:0,69,886	0/0:24,0:24:59.08:0,59,693	0/0:30,0:30:87.28:0,87,1202	0/0:34,0:34:99:0,99,1387	0/0:24,0:24:72.20:0,72,971	0/0:37,0:37:99:0,105,1455	0/0:20,0:20:60.18:0,60,808	0/0:25,0:25:75.25:0,75,1045	0/0:20,0:20:57.13:0,57,756	1/1:3,35:38:99:1188,99,0	0/0:30,0:30:87.28:0,87,1201	1/1:3,22:25:63.19:755,63,0	0/0:39,0:39:99:0,114,1596	0/0:34,0:34:96.32:0,96,1345	0/0:20,0:20:57.19:0,57,798	0/0:11,0:11:30.10:0,30,420	0/0:24,0:24:69.22:0,69,950	0/0:31,0:31:93.27:0,93,1280	0/0:20,0:20:57.19:0,57,797	0/0:17,0:17:51.16:0,51,697	1/1:0,21:21:63.19:756,63,0	1/1:0,21:21:60.18:720,60,0	0/0:15,0:15:36.12:0,36,504	0/0:26,0:26:75.25:0,75,1050	0/0:46,0:45:99:0,129,1783	0/0:6,0:6:18.06:0,18,251
chr10	33254074	.	C	CG	2107.08	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-9.872;DP=806;FS=0.557;HRun=2;HaplotypeScore=84.1936;InbreedingCoeff=0.9979;MQ=79.66;MQ0=0;MQRankSum=-1.647;QD=42.14;ReadPosRankSum=1.345;VQSLOD=3.5105;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,123,1681	0/0:19,0:19:57.19:0,57,797	0/0:21,0:21:59.66:0,60,772	0/0:17,0:17:48.14:0,48,648	0/0:42,0:42:99:0,126,1706	0/0:26,0:26:75.23:0,75,1017	0/0:30,0:30:90.29:0,90,1240	0/0:39,0:39:99:0,114,1561	0/0:31,0:31:90.26:0,90,1208	0/0:27,0:27:81.26:0,81,1117	0/0:18,0:18:48.14:0,48,652	0/0:34,0:34:96.31:0,96,1324	0/0:21,0:21:63.19:0,63,849	0/0:20,0:20:57.18:0,57,779	1/1:0,50:50:99:2202,138,0	0/0:49,0:49:99:0,144,1997	0/0:21,0:21:63.21:0,63,881	0/0:13,0:13:39.13:0,39,545	0/0:28,0:28:84.28:0,84,1175	0/0:34,0:34:96.27:0,96,1276	0/0:28,0:28:78.26:0,78,1090	0/0:27,0:27:81.24:0,81,1096	0/0:33,0:33:96.32:0,96,1342	0/0:35,0:35:99:0,105,1467	0/0:27,0:26:81.25:0,81,1112	0/0:30,0:30:90.26:0,90,1185	0/0:37,0:36:99:0,111,1552	0/0:8,0:7:24.08:0,24,335
chr10	33255796	.	CTT	C	3914.71	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=11.594;DP=698;FS=9.167;HRun=2;HaplotypeScore=81.3582;InbreedingCoeff=0.9988;MQ=77.51;MQ0=0;MQRankSum=-1.521;QD=43.99;ReadPosRankSum=3.939;VQSLOD=2.8440;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:66.23:0,66,1341	0/0:12,0:12:36.12:0,36,709	0/0:22,0:22:66.22:0,66,1280	0/0:8,0:8:24.08:0,24,488	0/0:32,0:32:96.33:0,96,1931	0/0:38,0:38:99:0,114,2315	0/0:21,0:21:63.20:0,63,1234	0/0:36,0:36:99:0,108,2164	0/0:21,0:21:63.20:0,63,1229	0/0:45,0:45:99:0,135,2670	0/0:28,0:27:84.29:0,84,1696	1/1:0,16:16:36.12:587,36,0	0/0:38,0:38:99:0,114,2271	1/1:0,26:26:72.25:1175,72,0	0/0:30,0:30:90.30:0,90,1793	0/0:30,0:30:90.30:0,90,1793	0/0:16,0:16:48.16:0,48,975	0/0:8,0:8:24.03:0,24,423	0/0:18,0:18:54.17:0,54,1019	0/0:41,0:41:99:0,123,2488	0/0:18,0:18:54.19:0,54,1097	0/0:24,0:24:69.22:0,69,1354	1/1:0,28:28:75.26:1224,75,0	1/1:0,19:19:57.19:930,57,0	0/0:29,0:28:87.28:0,87,1730	0/0:26,0:26:75.25:0,75,1486	0/0:33,0:33:99:0,99,1974	0/0:13,0:13:39.13:0,39,792
chr10	33257122	.	A	AGGAG	2685.90	PASS	AB=1.000;AC=43;AF=0.935;AN=46;DP=109;FS=0.000;HRun=0;HaplotypeScore=45.0977;InbreedingCoeff=0.2403;MQ=41.34;MQ0=0;QD=27.41;VQSLOD=2.9547;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	1/1:1,2:3:9.03:174,9,0	0/1:3,0:3:0:0,0,0	./.	1/1:3,2:5:6.02:94,6,0	1/1:2,1:3:6.02:93,6,0	1/1:3,0:3:5.75:68,6,0	1/1:1,1:2:2.22:8,2,0	1/1:0,3:3:9.03:144,9,0	1/1:4,1:5:9.50:126,10,0	1/1:2,4:7:15.52:277,16,0	0/1:3,0:3:0:0,0,0	1/1:3,4:6:18.06:290,18,0	1/1:1,1:2:3.01:66,3,0	1/1:7,0:6:12.04:181,12,0	1/1:3,2:6:5.80:40,6,0	1/1:3,2:5:6.02:138,6,0	1/1:1,1:2:6.02:123,6,0	1/1:5,1:7:15.02:262,15,0	1/1:2,3:6:12.47:136,12,0	./.	1/1:0,7:7:21.05:286,21,0	1/1:2,3:5:9.03:134,9,0	0/1:1,0:1:0:0,0,0	1/1:1,1:2:3.01:39,3,0	1/1:3,1:4:3.90:79,4,0	./.	./.
chr10	33257278	.	G	GA	7202.80	PASS	AB=0.781;AC=33;AF=0.589;AN=56;BaseQRankSum=-4.343;DP=501;FS=6.843;HRun=1;HaplotypeScore=102.9304;InbreedingCoeff=0.3755;MQ=57.02;MQ0=13;MQRankSum=-0.226;QD=19.41;ReadPosRankSum=4.532;VQSLOD=5.0285;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:18,0:17:30.39:135,0,30	1/1:3,4:7:11.87:148,12,0	0/0:12,0:8:18.02:0,18,192	0/0:27,0:20:38.79:0,39,476	0/0:23,0:22:23.21:0,23,413	0/0:18,0:16:20.05:0,20,330	0/0:19,0:17:37.23:0,37,431	1/1:7,19:25:47.99:833,48,0	0/0:10,0:10:19.60:0,20,184	1/1:18,17:32:22.17:854,22,0	1/1:10,11:21:27.95:466,28,0	1/1:16,0:15:22.44:156,22,0	0/1:9,7:16:18.81:160,0,19	1/1:19,0:19:18.59:273,19,0	1/1:19,0:19:27.62:228,28,0	0/1:10,11:21:28.23:392,0,28	0/0:21,0:20:30.17:0,30,449	1/1:1,9:10:23.82:327,24,0	1/1:4,17:20:46.05:723,46,0	0/1:8,8:16:10.83:202,0,11	1/1:7,15:19:39.13:585,39,0	0/1:14,10:23:15.20:410,0,15	0/1:13,0:14:1.73:124,0,2	1/1:6,0:6:8.46:73,8,0	0/1:11,5:16:4.22:216,0,4	0/1:13,9:20:27.25:402,0,27	1/1:7,8:14:30.10:441,30,0	0/1:4,1:4:10.48:57,0,10
chr10	33257279	.	A	AG	5657.16	PASS	AB=0.896;AC=38;AF=0.679;AN=56;BaseQRankSum=1.436;DP=494;FS=5.178;HRun=2;HaplotypeScore=109.6269;InbreedingCoeff=0.4724;MQ=57.99;MQ0=13;MQRankSum=-2.909;QD=14.81;ReadPosRankSum=2.804;VQSLOD=4.8270;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:12,8:18:3.86:353,0,4	1/1:5,2:7:12:108,12,0	0/0:12,0:8:20.92:0,21,246	0/0:28,0:21:37.60:0,38,458	0/0:23,0:22:32.35:0,32,407	0/1:17,1:16:7.74:8,0,267	0/0:18,0:17:34.28:0,34,411	1/1:21,3:23:61.94:483,62,0	0/0:10,0:10:14.36:0,14,159	1/1:25,7:29:35.50:600,35,0	1/1:21,0:21:14.27:195,14,0	1/1:9,9:17:26.73:326,27,0	0/1:16,0:16:3.91:84,0,4	1/1:3,14:17:39.12:545,39,0	1/1:6,14:19:39.06:524,39,0	0/1:18,1:19:19.53:189,0,20	0/0:21,0:20:33.07:0,33,431	1/1:10,0:10:5.59:129,6,0	1/1:19,1:19:50.27:351,50,0	0/1:14,2:16:39.72:86,0,40	1/1:22,1:20:38.50:263,39,0	1/1:20,4:23:6.60:227,7,0	1/1:6,8:14:1.41:318,1,0	1/1:2,5:7:11.41:171,11,0	1/1:11,5:16:3.41:106,3,0	0/1:18,3:19:6.34:253,0,6	1/1:12,1:13:32.74:274,33,0	1/1:4,1:4:6.84:63,7,0
chr10	33265857	.	C	CA	9452.81	PASS	AB=1.000;AC=36;AF=0.643;AN=56;BaseQRankSum=-7.715;DP=617;FS=14.019;HRun=1;HaplotypeScore=109.3909;InbreedingCoeff=0.6911;MQ=75.84;MQ0=9;MQRankSum=-1.662;QD=20.16;ReadPosRankSum=3.052;VQSLOD=3.9007;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:17,10:27:10.35:413,10,0	1/1:1,13:14:30.07:368,30,0	0/0:23,0:22:47.07:0,47,499	0/0:22,0:13:37.28:0,37,312	0/0:8,0:8:14.76:0,15,107	0/0:20,0:20:41.99:0,42,392	0/0:18,0:18:46.45:0,46,375	1/1:7,26:34:77.92:718,78,0	0/0:14,0:14:32.59:0,33,273	1/1:3,23:25:71.86:761,72,0	1/1:2,21:23:62.85:695,63,0	0/1:22,0:22:23.30:23,0,87	1/1:4,14:20:19.90:211,20,0	0/1:10,0:10:10.12:10,0,25	0/1:22,0:22:19.15:19,0,38	1/1:2,21:23:63.10:702,63,0	0/0:14,0:14:37.10:0,37,283	1/1:2,20:22:51.55:568,52,0	1/1:1,22:22:59.80:619,60,0	1/1:6,20:26:46.82:496,47,0	1/1:10,21:30:83.31:917,83,0	1/1:5,33:37:71.50:884,71,0	0/1:23,0:23:12.69:73,0,13	0/0:29,0:29:21.68:0,22,91	1/1:2,23:24:47.65:506,48,0	1/1:3,18:19:54.05:592,54,0	1/1:6,21:25:43.38:599,43,0	1/1:1,10:10:24.01:278,24,0
chr10	33265866	.	C	CCA	5225.98	PASS	AB=1.000;AC=43;AF=0.768;AN=56;BaseQRankSum=-6.094;DP=617;FS=1.807;HRun=0;HaplotypeScore=140.3983;InbreedingCoeff=0.6093;MQ=69.24;MQ0=9;MQRankSum=-1.676;QD=10.47;ReadPosRankSum=-2.370;VQSLOD=4.2017;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,13:30:37.01:551,37,0	1/1:16,0:16:40.14:227,40,0	0/1:20,0:18:75.05:75,0,122	0/0:24,0:13:3.85:0,4,102	1/1:4,8:12:10.66:99,11,0	1/1:14,6:23:9.48:118,9,0	1/1:9,9:20:17.85:221,18,0	1/1:26,0:27:17.98:204,18,0	1/1:9,0:11:18.33:193,18,0	1/1:32,0:31:63.02:455,63,0	1/1:20,0:21:53.67:264,54,0	0/1:23,0:23:18.87:19,0,89	0/0:15,0:15:20.24:0,20,132	0/1:13,0:13:43.28:43,0,47	0/0:22,0:22:14.95:0,15,97	1/1:21,0:22:54.20:282,54,0	1/1:12,4:16:9.03:140,9,0	1/1:20,0:20:45.70:245,46,0	1/1:26,0:25:39.28:304,39,0	1/1:19,0:21:42.53:214,43,0	1/1:27,0:28:27.62:295,28,0	1/1:33,0:33:58.89:396,59,0	0/0:23,0:23:10.17:0,10,105	0/0:34,0:33:22.06:0,22,155	1/1:21,0:22:48.60:257,49,0	1/1:22,0:21:51.43:293,51,0	1/1:24,0:22:50.08:251,50,0	1/1:13,0:11:7:81,7,0
chr10	33266340	.	A	AC	1007.74	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-7.328;DP=715;FS=7.966;HRun=0;HaplotypeScore=67.8967;InbreedingCoeff=0.9578;MQ=77.04;MQ0=0;MQRankSum=-2.497;QD=37.32;ReadPosRankSum=0.247;VQSLOD=3.2510;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,138,1909	0/0:17,0:17:51.15:0,51,683	0/0:17,0:17:35.87:0,36,465	0/0:12,0:12:10.60:0,11,418	0/0:41,0:41:99:0,123,1687	0/0:27,0:27:81.26:0,81,1117	0/0:23,0:23:69.21:0,69,931	0/0:31,0:31:87.27:0,87,1169	0/0:27,0:27:78.26:0,78,1091	0/0:37,0:37:99:0,108,1509	0/0:23,0:23:69.23:0,69,964	0/0:24,0:24:72.23:0,72,992	0/0:24,0:24:69.23:0,69,965	0/0:19,0:19:54.18:0,54,754	1/1:0,27:27:69.24:1103,69,0	0/0:28,1:29:36.31:0,36,1084	0/0:27,0:27:81.27:0,81,1133	0/0:8,0:8:24.06:0,24,315	0/0:26,0:26:75.24:0,75,1033	0/0:25,0:25:75.24:0,75,1030	0/0:25,0:25:69.21:0,69,945	0/0:32,0:32:96.32:0,96,1342	0/0:25,0:25:75.20:0,75,997	0/0:28,0:28:78.26:0,78,1090	0/0:16,0:16:48.16:0,48,671	0/0:33,0:33:96.30:0,96,1298	0/0:34,0:34:99:0,102,1409	0/0:12,0:12:36.12:0,36,502
chr10	33267043	.	TTC	T	101.27	PASS	AB=0.969;AC=8;AF=0.167;AN=48;BaseQRankSum=-0.135;DP=591;FS=34.558;HRun=0;HaplotypeScore=84.7196;InbreedingCoeff=-0.0323;MQ=67.57;MQ0=9;MQRankSum=0.665;QD=0.67;ReadPosRankSum=2.978;VQSLOD=0.0263;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:40,0:37:11.51:12,0,71	0/0:13,0:13:2.84:0,3,23	./.	./.	0/0:26,0:26:5.99:0,6,51	1/1:17,0:18:17.24:104,17,0	0/0:21,0:21:3.77:0,4,181	0/0:44,0:43:8.79:0,9,53	0/1:17,5:22:18.79:19,0,83	0/0:19,0:18:11.95:0,12,93	0/0:13,0:13:8.97:0,9,70	0/1:18,0:18:17.05:20,0,17	./.	0/1:15,0:15:30.24:30,0,83	0/0:16,0:16:6.01:0,6,65	0/0:19,0:19:10.23:0,10,79	0/0:35,0:33:11.67:0,12,347	0/0:16,0:14:9:0,9,79	0/0:25,0:25:5.97:0,6,46	0/0:17,0:17:5.99:0,6,49	0/0:22,0:21:5.98:0,6,48	0/0:20,0:20:5.87:0,6,41	0/1:16,0:16:3.96:4,0,151	0/1:23,0:23:38.48:38,0,71	0/0:22,0:22:5.68:0,6,28	0/0:23,0:23:23.10:0,23,166	0/0:16,0:15:5.98:0,6,47	./.
chr10	33267093	.	CT	C	1287.25	PASS	AB=1.000;AC=27;AF=0.482;AN=56;BaseQRankSum=-3.852;DP=505;FS=4.681;HRun=7;HaplotypeScore=58.6098;InbreedingCoeff=0.6686;MQ=61.77;MQ0=80;MQRankSum=1.638;QD=4.77;ReadPosRankSum=0.651;VQSLOD=-0.3394;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:15,20:17:29.39:303,29,0	1/1:12,0:7:4.73:47,5,0	0/0:14,0:10:23.90:0,24,238	0/0:11,0:7:9.02:0,9,94	0/0:16,0:16:39.48:0,39,427	0/0:16,0:16:31.07:0,31,340	0/0:17,0:17:43.50:0,43,478	1/1:16,9:14:18.03:182,18,0	0/0:19,0:19:35.70:0,36,409	1/1:13,0:10:15.48:145,15,0	1/1:14,0:10:8.42:67,8,0	0/1:3,0:16:6.67:7,0,13	1/1:4,6:5:9.02:91,9,0	0/0:16,0:16:37.60:0,38,384	0/0:16,0:14:24.89:0,25,94	0/1:20,0:18:1:54,0,1	0/0:33,0:31:78.19:0,78,927	0/0:16,0:14:2.49:0,2,5	1/1:13,2:7:8.80:74,9,0	1/1:14,1:10:2.87:15,3,0	0/0:16,0:16:1.25:0,1,3	0/1:20,0:17:12.30:18,0,12	0/0:28,0:28:73.66:0,74,733	0/0:17,0:17:39.52:0,40,395	1/1:6,6:6:12.02:121,12,0	1/1:30,0:23:29.89:276,30,0	1/1:21,0:16:2.62:23,3,0	1/1:2,4:2:6.01:61,6,0
chr10	33267094	.	T	TCTT	672.05	PASS	AB=0.732;AC=29;AF=0.518;AN=56;BaseQRankSum=1.934;DP=509;FS=0.546;HRun=0;HaplotypeScore=76.4718;InbreedingCoeff=0.4157;MQ=64.36;MQ0=78;MQRankSum=0.184;QD=2.11;ReadPosRankSum=-0.665;VQSLOD=1.2440;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:16:13.50:14,0,103	1/1:1,0:8:5.95:27,6,0	0/0:16,0:12:23.91:0,24,197	0/0:11,0:7:8.54:0,9,69	0/0:17,0:17:18.98:0,19,269	0/0:15,0:15:39.89:0,40,339	0/0:18,0:18:41.24:0,41,442	1/1:13,0:10:9.77:26,10,0	0/0:20,0:20:41.09:0,41,421	1/1:0,1:11:16.10:104,16,0	0/1:3,0:11:10.05:56,0,10	0/1:20,0:16:24.82:59,0,25	1/1:7,0:4:7:29,7,0	0/0:16,0:16:35.97:0,36,210	0/1:15,0:14:5.43:5,0,145	1/1:3,0:18:10.76:78,11,0	0/0:33,0:31:77.95:0,78,850	1/1:2,0:14:8.38:98,8,0	1/1:4,0:7:10.23:73,10,0	0/1:3,0:11:9.98:10,0,20	0/1:2,0:15:12.74:34,0,13	1/1:0,0:19:5.87:51,6,0	0/0:29,0:29:21.77:0,22,196	0/0:16,0:16:9.23:0,9,156	0/1:8,0:6:20.08:20,0,29	1/1:5,0:23:20.19:113,20,0	1/1:6,0:18:5.98:56,6,0	1/1:6,0:3:4.59:14,5,0
chr10	33268512	.	TA	T	555.16	PASS	AB=0.778;AC=6;AF=0.107;AN=56;BaseQRankSum=0.893;DP=492;FS=8.389;HRun=1;HaplotypeScore=162.6255;InbreedingCoeff=0.2063;MQ=51.27;MQ0=22;MQRankSum=-1.714;QD=7.03;ReadPosRankSum=-2.528;VQSLOD=-0.5653;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:17:15.81:0,16,272	0/0:5,3:8:6.02:0,6,92	0/0:25,0:7:15.03:0,15,192	0/0:19,0:6:5.49:0,5,84	0/0:25,0:23:29.73:0,30,458	0/0:20,0:18:12.04:0,12,183	0/0:17,0:15:11.71:0,12,188	0/0:19,0:15:45.15:0,45,693	0/0:21,0:17:21.07:0,21,327	0/0:12,0:12:19.39:0,19,391	0/0:23,0:22:39.11:0,39,590	0/0:21,0:21:50.88:0,51,788	0/0:15,0:15:21.06:0,21,298	0/0:15,1:16:33.11:0,33,503	1/1:6,20:25:36.11:482,36,0	0/0:26,0:26:24.08:0,24,372	0/0:16,0:15:24.30:0,24,365	0/1:5,1:5:29.87:30,0,104	0/1:12,2:14:81.75:82,0,412	0/0:22,1:19:27.08:0,27,389	0/0:11,0:10:13.70:0,14,193	0/0:17,0:17:19.47:0,19,373	0/0:17,0:17:42.14:0,42,646	0/0:16,0:16:24.07:0,24,350	0/0:9,0:8:6.02:0,6,93	0/0:17,1:17:9.33:0,9,691	0/1:19,6:23:2.81:3,0,490	0/1:2,6:8:73.76:83,0,74
chr10	33268518	.	G	GC	410.50	PASS	AB=0.901;AC=11;AF=0.196;AN=56;BaseQRankSum=1.336;DP=489;FS=0.851;HRun=0;HaplotypeScore=168.8156;InbreedingCoeff=-0.1544;MQ=47.90;MQ0=24;MQRankSum=-3.865;QD=2.37;ReadPosRankSum=-3.500;VQSLOD=2.2140;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:17:15.75:0,16,94	0/0:4,3:7:2.99:0,3,24	0/0:20,0:5:8.39:0,8,83	0/1:16,0:3:0.93:26,0,1	0/0:26,0:24:26.70:0,27,377	0/0:21,0:19:12:0,12,146	0/0:18,0:15:12.04:0,12,170	0/1:22,0:16:78.67:79,0,433	0/0:21,0:17:20.95:0,21,292	0/1:14,0:14:12.12:12,0,319	0/0:27,0:26:42.08:0,42,534	0/0:21,0:21:48.16:0,48,663	0/0:14,0:14:11.97:0,12,110	0/0:13,1:14:29.99:0,30,395	0/0:23,0:22:30.09:0,30,403	0/0:27,0:27:32.62:0,33,328	0/0:16,0:15:24.41:0,24,336	0/1:7,1:7:29.99:30,0,117	0/1:14,2:16:99:103,0,317	0/1:19,3:18:26.85:27,0,217	0/1:11,0:10:34.51:35,0,110	0/1:15,0:15:1.33:1,0,219	0/0:17,0:17:39.13:0,39,540	0/0:16,0:16:18.06:0,18,249	0/0:9,0:8:14.32:0,14,141	0/1:15,1:15:2.74:3,0,468	0/1:18,6:22:17.77:18,0,313	0/1:2,6:8:62.84:216,0,63
chr10	33268520	.	T	TAG	2672.27	PASS	AB=0.916;AC=16;AF=0.296;AN=54;BaseQRankSum=1.089;DP=486;FS=0.000;HRun=0;HaplotypeScore=165.8162;InbreedingCoeff=-0.1814;MQ=47.90;MQ0=25;MQRankSum=-2.868;QD=10.12;ReadPosRankSum=4.302;VQSLOD=3.0465;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:17,0:17:2.25:2,0,40	./.	0/0:19,0:5:5.48:0,5,32	0/1:15,0:2:1.37:1,0,5	0/0:26,0:24:26.94:0,27,333	0/0:20,0:18:8.55:0,9,127	0/0:18,0:15:9.32:0,9,112	0/1:22,0:16:46.93:203,0,47	0/0:19,0:15:15.02:0,15,214	0/1:16,0:16:99:333,0,132	0/1:25,3:27:86.27:426,0,86	0/0:21,0:21:45:0,45,443	0/1:9,4:13:76.62:77,0,111	0/0:13,0:13:23.86:0,24,192	0/0:22,0:21:27.09:0,27,370	0/1:28,0:28:94.82:152,0,95	0/0:15,1:15:23.80:0,24,284	0/1:5,3:7:51.41:107,0,51	0/1:10,4:14:33.55:241,0,34	0/1:20,2:18:6.36:170,0,6	0/1:8,2:9:10.75:71,0,11	0/1:14,0:14:37.76:158,0,38	0/0:17,0:17:30.84:0,31,313	0/0:14,1:15:13.88:0,14,128	0/1:8,1:8:50.68:51,0,53	1/1:18,0:16:17.44:578,17,0	0/1:27,0:25:64.18:258,0,64	0/0:10,0:10:19.75:0,20,144
chr10	33268522	.	GAT	G	2194.52	PASS	AB=0.748;AC=14;AF=0.250;AN=56;BaseQRankSum=1.150;DP=482;FS=0.000;HRun=0;HaplotypeScore=166.9112;InbreedingCoeff=-0.3448;MQ=47.72;MQ0=25;MQRankSum=-1.568;QD=8.88;ReadPosRankSum=4.100;VQSLOD=3.1134;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:19,0:17:4.83:5,0,38	0/0:3,3:6:14.65:0,15,87	0/0:19,0:5:5.48:0,5,32	0/0:14,0:2:1.39:0,1,7	0/0:26,0:24:26.94:0,27,364	0/0:20,0:18:9.03:0,9,128	0/0:18,0:15:8.35:0,8,139	0/1:11,8:13:99:196,0,153	0/0:20,0:16:15.05:0,15,251	0/1:9,8:17:99:335,0,175	0/1:14,12:25:99:294,0,166	0/0:21,0:21:47.75:0,48,807	0/1:10,3:13:69.62:70,0,244	0/0:13,0:13:27.08:0,27,431	0/0:21,0:20:27.09:0,27,442	0/1:8,18:26:99:140,0,262	0/0:16,0:15:24.54:0,25,372	0/1:8,0:7:35.48:35,0,84	0/1:11,2:14:99:145,0,120	0/1:11,12:19:99:153,0,104	0/1:7,2:10:42:42,0,58	0/1:5,9:14:99:119,0,111	0/0:17,0:17:33.09:0,33,544	0/0:14,0:14:14.93:0,15,251	0/1:7,3:9:47.36:47,0,161	0/1:6,14:18:46.10:526,0,46	0/1:12,14:26:99:238,0,240	0/0:10,0:10:23.99:0,24,284
chr10	33268540	.	TAG	T	2471.58	PASS	AB=0.788;AC=31;AF=0.596;AN=52;BaseQRankSum=3.943;DP=458;FS=0.468;HRun=0;HaplotypeScore=184.1652;InbreedingCoeff=0.0707;MQ=41.68;MQ0=15;MQRankSum=5.546;QD=6.90;ReadPosRankSum=-0.843;VQSLOD=3.3052;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,5:13:0.78:4,1,0	0/0:8,3:11:30.10:0,30,453	./.	./.	1/1:6,15:19:8.90:126,9,0	1/1:3,17:18:5.80:85,6,0	0/0:8,8:13:1.37:0,1,5	0/0:33,0:28:75.13:0,75,958	1/1:5,15:16:8.82:128,9,0	1/1:11,7:18:27.47:469,27,0	0/1:20,7:27:16.24:55,0,16	0/1:13,6:19:18.31:157,0,18	0/1:10,4:14:33.73:106,0,34	1/1:9,4:13:18.01:135,18,0	1/1:6,11:16:11.98:116,12,0	0/1:10,11:21:90.01:90,0,104	0/1:9,4:12:28.58:132,0,29	1/1:6,3:9:8.84:95,9,0	0/1:14,2:16:58.27:58,0,394	0/0:18,11:28:54.54:0,55,764	0/1:9,0:8:2.99:3,0,20	0/1:10,6:16:2.79:212,0,3	1/1:10,5:15:12.62:98,13,0	1/1:8,7:15:9.37:92,9,0	0/1:8,2:10:16.84:17,0,58	0/1:11,10:19:99:361,0,265	0/1:22,8:29:98.80:99,0,836	0/0:8,0:8:24.08:0,24,368
chr10	33268542	.	G	GAT	2634.54	PASS	AB=1.000;AC=30;AF=0.577;AN=52;BaseQRankSum=3.572;DP=452;FS=2.158;HRun=0;HaplotypeScore=185.2027;InbreedingCoeff=0.1237;MQ=41.45;MQ0=14;MQRankSum=5.407;QD=7.64;ReadPosRankSum=-1.919;VQSLOD=2.9946;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:13:0.32:3,0,0	0/0:13,0:13:33.09:0,33,477	./.	./.	1/1:20,2:20:11.09:140,11,0	1/1:18,2:18:6.02:91,6,0	0/0:14,1:12:0.30:0,0,1	0/0:32,0:27:78.10:0,78,979	1/1:15,4:15:9.03:128,9,0	1/1:17,0:17:34.10:468,34,0	0/1:25,0:25:16.33:66,0,16	0/1:19,0:19:15.87:173,0,16	0/1:15,0:15:30.73:127,0,31	1/1:13,0:13:18.11:144,18,0	1/1:16,0:15:14.99:159,15,0	0/1:21,0:21:89.70:90,0,102	0/1:15,0:14:63.55:130,0,64	1/1:9,0:9:9.47:136,9,0	0/1:15,0:15:51.29:51,0,396	0/0:29,0:28:54.54:0,55,767	0/0:7,0:7:5.76:0,6,31	0/1:16,0:16:1.65:212,0,2	1/1:14,0:14:12.62:102,13,0	1/1:16,0:15:11.39:110,11,0	0/1:10,0:10:15.81:16,0,64	0/1:20,0:19:99:358,0,288	0/1:29,0:29:98.78:99,0,836	0/0:8,0:8:24.08:0,24,364
chr10	33268556	.	GAT	G	169.37	PASS	AB=0.798;AC=8;AF=0.143;AN=56;BaseQRankSum=1.345;DP=487;FS=0.000;HRun=0;HaplotypeScore=175.4071;InbreedingCoeff=0.4279;MQ=42.69;MQ0=19;MQRankSum=2.174;QD=1.86;ReadPosRankSum=0.142;VQSLOD=2.5504;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:14:0.60:1,1,0	0/0:15,0:15:42.14:0,42,793	0/0:2,0:1:3.01:0,3,43	0/0:4,0:1:2.37:0,2,8	1/1:11,11:22:8.23:65,8,0	0/1:11,11:19:27.20:51,0,27	0/1:12,1:11:38.23:38,0,40	0/0:41,0:36:99:0,108,1655	1/1:9,10:15:8.82:136,9,0	0/0:22,0:22:62.58:0,63,935	0/0:23,0:23:45.13:0,45,823	0/0:20,0:18:32.64:0,33,489	0/0:17,0:17:44.51:0,45,762	0/0:14,0:13:21.01:0,21,279	0/0:16,0:13:9.03:0,9,166	0/0:23,0:23:48.11:0,48,805	0/0:11,2:12:3.48:0,3,45	0/0:10,0:10:27.09:0,27,460	0/0:14,0:14:40.67:0,41,645	0/0:36,0:35:74.20:0,74,1316	0/0:7,0:6:0.85:0,1,19	0/0:14,0:14:33.11:0,33,561	0/0:15,0:12:15.01:0,15,220	0/0:15,0:14:14.94:0,15,244	0/0:11,0:11:27.09:0,27,500	0/0:23,0:21:60.16:0,60,906	0/0:30,0:30:80.54:0,81,1378	0/0:11,0:11:33.11:0,33,605
chr10	33268558	.	T	TAG	336.51	PASS	AB=0.907;AC=6;AF=0.107;AN=56;BaseQRankSum=-0.727;DP=482;FS=0.000;HRun=0;HaplotypeScore=170.0908;InbreedingCoeff=0.4937;MQ=43.47;MQ0=17;MQRankSum=1.023;QD=4.26;ReadPosRankSum=-0.761;VQSLOD=2.8064;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:15:5.97:0,6,47	0/0:15,0:15:42.14:0,42,601	0/0:2,0:1:3.01:0,3,43	0/0:4,0:1:2.37:0,2,8	1/1:16,8:25:8.59:160,9,0	0/1:20,3:20:2.79:124,0,3	0/1:12,1:11:38.06:39,0,38	0/0:41,0:37:99:0,111,1537	1/1:18,0:15:9.03:136,9,0	0/0:23,0:23:54.68:0,55,554	0/0:22,0:22:41.82:0,42,361	0/0:20,0:18:27.41:0,27,294	0/0:17,0:17:38.79:0,39,296	0/0:12,0:11:17.92:0,18,185	0/0:15,0:12:9.03:0,9,106	0/0:23,0:23:45.41:0,45,405	0/0:5,7:11:2.79:0,3,43	0/0:10,0:10:26.04:0,26,304	0/0:14,0:14:41.60:0,42,532	0/0:34,0:33:78.63:0,79,1053	0/0:7,0:6:10.80:0,11,92	0/0:14,0:14:31.56:0,32,225	0/0:15,0:12:12:0,12,133	0/0:15,0:14:14.95:0,15,146	0/0:11,0:11:25.62:0,26,221	0/0:22,0:20:59.11:0,59,706	0/0:28,0:28:76.96:0,77,1026	0/0:11,0:11:33.11:0,33,472
chr10	33268564	.	GAT	G	440.97	PASS	AB=0.756;AC=5;AF=0.089;AN=56;BaseQRankSum=2.296;DP=496;FS=4.780;HRun=0;HaplotypeScore=160.8726;InbreedingCoeff=0.0992;MQ=45.10;MQ0=16;MQRankSum=2.988;QD=5.31;ReadPosRankSum=-0.146;VQSLOD=2.6633;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:15:4.36:0,4,49	0/0:14,0:14:42.14:0,42,793	0/0:3,0:2:6.02:0,6,86	0/0:6,0:3:5.99:0,6,72	0/0:23,3:26:14.93:0,15,233	0/1:22,0:20:25.14:25,0,135	0/0:14,0:12:13.41:0,13,175	0/0:48,0:45:99:0,128,1889	0/0:19,0:16:12.01:0,12,120	0/0:25,0:24:69.09:0,69,1033	0/0:26,0:26:57.17:0,57,994	0/1:9,7:14:2.89:127,0,3	0/0:16,0:16:48.16:0,48,840	0/1:9,5:13:2.46:192,0,2	0/0:11,4:12:7.95:0,8,43	0/0:22,0:22:48.15:0,48,824	0/0:12,0:12:3.48:0,3,45	0/0:10,0:10:27.07:0,27,445	0/0:15,0:15:40.05:0,40,627	0/0:30,0:29:69.91:0,70,1295	0/0:6,1:6:0.85:0,1,19	0/0:14,0:14:36.11:0,36,586	0/1:7,8:12:8.64:89,0,9	0/1:9,7:15:25.86:124,0,26	0/0:11,0:11:27.09:0,27,500	0/0:23,0:21:52.50:0,52,754	0/0:26,0:26:74.56:0,75,1334	0/0:15,0:14:42.14:0,42,731
chr10	33268566	.	T	TAG	728.44	PASS	AB=0.875;AC=10;AF=0.179;AN=56;BaseQRankSum=0.373;DP=493;FS=7.706;HRun=0;HaplotypeScore=156.8020;InbreedingCoeff=0.6199;MQ=45.56;MQ0=16;MQRankSum=3.991;QD=7.59;ReadPosRankSum=-1.055;VQSLOD=2.2501;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:15:5.98:0,6,67	0/0:15,0:15:45.13:0,45,625	0/0:3,0:2:6.02:0,6,86	0/0:6,0:3:5.99:0,6,72	0/0:26,0:26:14.99:0,15,183	0/1:23,0:21:22.15:22,0,123	0/0:14,0:12:12.34:0,12,172	0/0:47,0:45:99:0,128,1698	0/0:20,0:17:11.99:0,12,119	0/0:25,0:24:60.07:0,60,617	0/0:27,0:27:56.86:0,57,556	1/1:9,6:13:14.99:268,15,0	0/0:16,0:16:44.81:0,45,382	1/1:10,3:12:15.05:246,15,0	1/1:15,0:12:4.11:10,4,0	0/0:20,0:20:45.97:0,46,439	0/0:12,0:12:2.92:0,3,43	0/0:10,0:10:23.03:0,23,266	0/0:15,0:15:36.12:0,36,495	0/0:31,0:30:73.94:0,74,1051	0/0:7,0:6:10.80:0,11,92	0/0:13,0:13:34.56:0,35,251	1/1:10,5:12:9.03:151,9,0	0/1:10,5:14:4.35:182,0,4	0/0:12,0:12:25.62:0,26,221	0/0:22,0:20:47.61:0,48,615	0/0:25,0:25:72.24:0,72,1027	0/0:15,0:14:42.14:0,42,597
chr10	33268568	.	GAT	G	32.86	PASS	AB=0.793;AC=3;AF=0.054;AN=56;BaseQRankSum=2.503;DP=492;FS=1.852;HRun=0;HaplotypeScore=155.5978;InbreedingCoeff=0.3164;MQ=46.19;MQ0=15;MQRankSum=1.105;QD=0.84;ReadPosRankSum=1.754;VQSLOD=2.8613;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:15:1.86:0,2,41	0/0:15,0:15:45.15:0,45,836	0/0:4,0:3:9.02:0,9,112	0/0:6,0:3:9.02:0,9,110	0/0:26,0:26:14.93:0,15,254	0/1:17,6:21:22.13:22,0,180	0/0:11,1:10:13.53:0,14,177	0/0:47,0:45:99:0,135,1947	0/0:20,0:18:18.04:0,18,249	0/0:24,0:24:68.49:0,68,1029	0/0:26,0:26:60.18:0,60,1039	0/0:16,0:14:16.34:0,16,116	0/0:16,0:16:48.16:0,48,840	0/0:13,0:12:3.74:0,4,24	1/1:9,7:13:9.02:106,9,0	0/0:20,0:20:48.16:0,48,842	0/0:13,0:13:6.96:0,7,86	0/0:9,0:9:24.08:0,24,422	0/0:17,0:17:43.51:0,44,642	0/0:31,0:30:74.61:0,75,1340	0/0:7,0:6:0.85:0,1,19	0/0:13,0:13:36.12:0,36,605	0/0:15,0:12:6.33:0,6,28	0/0:15,0:14:12.09:0,12,57	0/0:12,0:12:30.10:0,30,542	0/0:19,0:17:47.63:0,48,738	0/0:25,0:25:72.19:0,72,1321	0/0:15,0:14:42.14:0,42,734
chr10	33268646	.	T	TAA	1758.61	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-1.052;DP=495;FS=7.063;HRun=10;HaplotypeScore=66.6536;InbreedingCoeff=0.9558;MQ=66.87;MQ0=1;MQRankSum=0.260;QD=17.76;ReadPosRankSum=-0.373;VQSLOD=1.8828;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,0:15:19.96:70,20,0	0/0:7,0:7:18.04:0,18,183	0/0:15,0:12:4.24:0,4,57	0/0:13,0:9:10.59:0,11,95	0/0:28,0:28:69.07:0,69,686	0/0:11,0:14:35.29:0,35,310	0/0:11,0:11:24.01:0,24,244	0/0:38,0:38:95.89:0,96,945	0/0:13,0:14:29.80:0,30,357	0/0:20,0:22:59.60:0,60,568	0/0:27,0:27:72.10:0,72,719	1/1:3,10:12:36.12:537,36,0	0/0:20,0:20:51.07:0,51,511	1/1:3,15:17:27.09:403,27,0	1/1:5,0:18:21.03:200,21,0	0/0:19,0:19:48.08:0,48,482	0/0:14,0:14:33.04:0,33,326	0/0:9,0:9:24.04:0,24,241	0/0:30,0:30:75.13:0,75,756	0/0:27,0:28:51:0,51,596	0/0:6,0:6:18.02:0,18,176	0/0:12,0:12:33.04:0,33,329	1/1:4,16:17:21.53:314,22,0	1/1:5,8:13:29.86:421,30,0	0/0:15,0:15:42.09:0,42,425	0/0:18,0:18:39.04:0,39,390	0/0:22,0:22:49.95:0,50,517	0/0:10,0:11:26.63:0,27,255
chr10	33269565	.	ATCC	A	14834.55	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=16.336;DP=729;FS=16.052;HRun=0;HaplotypeScore=142.1970;InbreedingCoeff=0.9998;MQ=80.19;MQ0=0;MQRankSum=-7.733;QD=37.75;ReadPosRankSum=2.614;VQSLOD=4.7281;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,37:40:93.32:1493,93,0	1/1:0,13:13:39.13:626,39,0	0/0:23,0:23:60.15:0,60,1096	0/0:21,0:21:60.19:0,60,1214	0/0:39,0:39:99:0,102,2145	0/0:22,0:22:63.20:0,63,1347	0/0:30,0:30:78.27:0,78,1685	1/1:3,24:27:69.22:1084,69,0	0/0:27,0:27:81.26:0,81,1699	1/1:0,26:26:78.27:1247,78,0	1/1:3,14:17:33.11:529,33,0	0/0:30,0:30:87.30:0,87,1878	1/1:1,35:36:99:1625,102,0	0/0:32,0:32:93.31:0,93,2008	0/0:38,0:38:99:0,108,2341	1/1:0,23:23:63.21:1012,63,0	0/0:27,0:27:78.24:0,78,1641	1/1:4,15:19:39.13:627,39,0	1/1:3,18:21:54.15:819,54,0	1/1:3,28:32:54.18:867,54,0	1/1:2,25:27:48.16:770,48,0	1/1:0,24:24:45.15:722,45,0	0/0:24,0:24:72.25:0,72,1542	0/0:23,0:23:57.20:0,57,1236	1/1:1,25:26:57.19:915,57,0	1/1:1,23:24:66.20:1006,66,0	1/1:0,24:24:66.23:1060,66,0	1/1:4,10:14:27.09:434,27,0
chr10	33269887	.	GT	G	311.11	PASS	AB=0.787;AC=9;AF=0.161;AN=56;BaseQRankSum=-2.405;DP=526;FS=2.680;HRun=16;HaplotypeScore=93.7321;InbreedingCoeff=0.0943;MQ=72.37;MQ0=1;MQRankSum=2.053;QD=2.30;ReadPosRankSum=2.639;VQSLOD=-0.0707;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,3:25:5.83:0,6,361	0/0:1,0:6:8.18:0,8,38	0/1:26,0:20:19.18:19,0,33	0/1:12,0:8:2.89:3,0,25	0/1:21,6:29:25.60:26,0,254	0/0:20,2:22:29.90:0,30,352	0/1:9,3:12:8.21:8,0,135	0/0:20,0:31:57.94:0,58,329	0/0:13,4:17:17.45:0,17,230	0/0:7,0:26:55.68:0,56,289	0/0:11,0:21:35.67:0,36,197	0/1:4,9:13:23.90:95,0,24	0/0:7,0:17:28.67:0,29,153	1/1:3,11:16:8.32:146,8,0	0/0:8,0:21:31.40:0,31,167	0/0:8,0:24:37.41:0,37,209	0/0:19,2:21:17.95:0,18,259	0/0:7,0:13:26.49:0,26,150	0/0:6,0:11:17.01:0,17,85	0/0:7,0:32:80.07:0,80,417	0/0:4,0:7:8.52:0,9,43	0/0:7,0:17:29.69:0,30,159	0/1:8,5:13:63.08:63,0,68	0/1:4,8:12:4.57:86,0,5	0/0:8,0:19:40.29:0,40,220	0/0:10,0:22:43.01:0,43,226	0/0:14,0:30:41.94:0,42,225	0/0:2,0:7:8.52:0,9,43
chr10	33270504	.	A	AACTGACC	2332.96	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.557;DP=656;FS=7.115;HRun=0;HaplotypeScore=147.0258;InbreedingCoeff=0.9997;MQ=85.21;MQ0=0;MQRankSum=-8.006;QD=89.73;ReadPosRankSum=0.401;VQSLOD=4.5443;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:84.26:0,84,2034	0/0:12,0:12:36.12:0,36,950	0/0:24,0:24:69:0,69,1560	0/0:19,0:19:51.14:0,51,1166	0/0:32,0:32:93.32:0,93,2411	0/0:32,0:32:93.32:0,93,2408	0/0:16,0:16:48.16:0,48,1173	0/0:35,0:35:93.31:0,93,2243	0/0:13,0:13:39.12:0,39,962	0/0:31,0:31:90.31:0,90,2360	0/0:22,0:22:63.22:0,63,1649	0/0:22,0:22:59.52:0,60,1570	0/0:18,0:18:54.19:0,54,1409	0/0:20,0:20:60.21:0,60,1569	1/1:4,18:26:66.18:2428,66,0	0/0:14,0:14:42.14:0,42,1108	0/0:18,0:18:54.19:0,54,1424	0/0:17,0:17:48.14:0,48,1209	0/0:14,0:14:42.13:0,42,1003	0/0:34,0:34:99:0,99,2568	0/0:14,0:14:42.13:0,42,1043	0/0:23,0:23:69.24:0,69,1793	0/0:30,0:30:84.29:0,84,2201	0/0:21,0:21:60.18:0,60,1446	0/0:28,0:28:84.27:0,84,2149	0/0:31,0:31:90.31:0,90,2348	0/0:38,0:38:99:0,114,3007	0/0:20,0:20:60.21:0,60,1501
chr10	33271840	.	TG	T	1789.43	PASS	AC=8;AF=0.154;AN=52;BaseQRankSum=2.516;DP=672;FS=1.920;HRun=1;HaplotypeScore=86.6555;InbreedingCoeff=0.9644;MQ=38.12;MQ0=60;MQRankSum=1.598;QD=21.30;ReadPosRankSum=-0.168;VQSLOD=3.6793;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:27:33.11:0,33,522	0/0:11,0:11:33.10:0,33,502	./.	./.	0/0:31,0:31:57.19:0,57,894	0/0:20,0:20:36.12:0,36,573	0/0:28,0:23:54.18:0,54,855	0/0:31,0:26:78.27:0,78,1232	0/0:22,0:22:33.11:0,33,524	0/0:27,0:27:81.28:0,81,1285	0/0:38,0:38:62.88:0,63,970	1/1:0,18:17:27.05:355,27,0	0/0:27,0:27:48.15:0,48,741	1/1:0,23:22:42.09:586,42,0	0/0:21,0:21:48.16:0,48,764	0/0:32,0:32:78.17:0,78,1241	0/0:27,0:20:24.08:0,24,381	0/0:4,0:4:9.03:0,9,143	0/0:24,0:22:66.20:0,66,1025	0/0:43,0:43:99:0,123,1958	0/0:14,0:8:9.03:0,9,144	0/0:36,0:36:63.21:0,63,1002	1/1:0,25:25:54.18:754,54,0	1/1:0,18:14:18.06:251,18,0	0/0:20,0:20:45.15:0,45,714	0/0:32,0:30:90.26:0,90,1410	0/0:27,0:27:66.22:0,66,1043	0/0:13,0:13:30.06:0,30,429
chr10	33272227	.	G	GA	2476.27	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=11.542;DP=587;FS=2.415;HRun=1;HaplotypeScore=66.2361;InbreedingCoeff=0.9971;MQ=82.86;MQ0=0;MQRankSum=-1.489;QD=38.69;ReadPosRankSum=2.521;VQSLOD=4.4551;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:72.24:0,72,1005	0/0:11,0:11:30.09:0,30,402	0/0:24,0:24:60.04:0,60,812	0/0:16,0:16:42.11:0,42,538	0/0:26,0:26:72.24:0,72,1003	0/0:32,0:32:93.31:0,93,1301	0/0:18,0:18:51.17:0,51,712	0/0:26,0:25:75.24:0,75,1034	0/0:24,0:24:72.24:0,72,1007	0/0:38,0:37:99:0,114,1576	0/0:20,0:20:57.19:0,57,796	1/1:0,19:19:51.17:815,51,0	0/0:16,0:16:48.16:0,48,668	1/1:0,15:15:39.13:623,39,0	0/0:23,0:23:69.23:0,69,965	0/0:21,0:21:63.21:0,63,876	0/0:16,0:16:48.16:0,48,671	0/0:10,0:10:30.10:0,30,416	0/0:20,0:20:57.18:0,57,774	0/0:35,0:35:99:0,102,1405	0/0:17,0:17:48.14:0,48,652	0/0:23,0:23:69.23:0,69,965	1/1:0,20:20:57.06:911,57,0	1/1:0,10:10:17.92:287,18,0	0/0:25,0:25:72.24:0,72,1006	0/0:24,0:24:72.24:0,72,1007	0/0:25,0:25:75.25:0,75,1045	0/0:9,0:9:27.09:0,27,375
chr10	33272756	.	TA	T	1574.18	PASS	AB=0.950;AC=11;AF=0.196;AN=56;BaseQRankSum=3.256;DP=560;FS=12.845;HRun=10;HaplotypeScore=80.1411;InbreedingCoeff=0.8817;MQ=61.09;MQ0=3;MQRankSum=3.920;QD=15.74;ReadPosRankSum=2.654;VQSLOD=2.9843;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:48.09:0,48,516	0/0:11,0:11:30.08:0,30,330	0/0:19,1:3:8.02:0,8,56	0/1:17,1:4:5.11:5,0,27	0/0:44,0:44:99:0,120,1303	0/0:17,0:16:45.12:0,45,496	0/0:10,0:10:30.07:0,30,323	0/0:34,0:34:89.95:0,90,950	0/0:20,0:20:48.12:0,48,523	0/0:18,0:18:45.11:0,45,488	0/0:26,0:26:69.16:0,69,736	1/1:0,11:11:29.99:260,30,0	0/0:21,0:21:57.15:0,57,630	1/1:1,16:17:44.99:391,45,0	1/1:2,13:15:26.99:234,27,0	0/0:23,1:24:34.17:0,34,597	0/0:24,0:24:66.18:0,66,730	0/0:14,0:14:30.97:0,31,333	0/0:18,0:18:39.10:0,39,443	0/0:33,0:34:64.97:0,65,899	0/0:6,0:6:9.02:0,9,99	0/0:16,0:16:45.11:0,45,489	1/1:1,24:25:68.99:599,69,0	1/1:1,12:13:29.98:260,30,0	0/0:29,0:29:72.15:0,72,776	0/0:12,0:12:36.09:0,36,391	0/0:32,1:32:58.13:0,58,857	0/0:11,0:11:15.04:0,15,166
chr10	33272784	.	G	GAAGAA	13375.56	PASS	AB=0.592;AC=30;AF=0.536;AN=56;BaseQRankSum=-12.074;DP=585;FS=0.000;HRun=0;HaplotypeScore=100.6250;InbreedingCoeff=0.8283;MQ=60.34;MQ0=8;MQRankSum=0.068;QD=41.03;ReadPosRankSum=0.222;VQSLOD=4.7550;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:23:24.02:327,24,0	1/1:5,5:10:12.04:317,12,0	0/0:29,0:8:8.93:0,9,166	0/0:31,0:9:14.78:0,15,173	0/0:42,0:42:66.18:0,66,1133	0/0:19,0:18:42.13:0,42,734	0/0:9,0:9:21.06:0,21,359	1/1:38,0:38:57.18:1212,57,0	0/0:17,0:17:33.10:0,33,584	0/1:5,13:19:13.70:974,0,14	1/1:7,16:24:48.08:1159,48,0	0/0:15,0:14:24.08:0,24,438	1/1:7,11:20:21.07:602,21,0	0/0:20,0:20:39.13:0,39,725	0/0:16,0:16:36.11:0,36,636	1/1:3,18:21:41.67:1203,42,0	0/0:26,0:26:53.87:0,54,966	1/1:6,6:12:15.05:385,15,0	1/1:12,9:19:27.07:694,27,0	1/1:9,20:29:60.17:1541,60,0	1/1:6,0:6:12.03:243,12,0	1/1:6,11:18:36.08:931,36,0	0/0:24,0:24:45.15:0,45,831	0/0:10,0:10:21.06:0,21,360	1/1:5,22:28:48.16:1360,48,0	1/1:3,15:20:51.17:1344,51,0	0/1:10,17:27:22.38:825,0,22	1/1:4,5:9:9.03:257,9,0
chr10	33284255	.	A	AGTGTGTGCGT	2117.09	PASS	AB=1.000;AC=18;AF=0.321;AN=56;BaseQRankSum=-6.021;DP=625;FS=0.000;HRun=0;HaplotypeScore=180.9402;InbreedingCoeff=0.2852;MQ=65.18;MQ0=14;MQRankSum=0.569;QD=7.28;ReadPosRankSum=-1.573;VQSLOD=2.3797;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:42,0:42:3.33:137,0,3	0/1:10,0:10:20.49:20,0,37	0/0:12,0:10:18.02:0,18,171	0/0:17,0:13:30.03:0,30,306	0/0:11,0:13:23.94:0,24,201	1/1:18,0:18:2.95:40,3,0	0/1:19,0:18:23.11:23,0,228	1/1:30,0:29:70.02:517,70,0	1/1:12,0:13:12.50:164,13,0	0/1:23,0:23:99:207,0,113	0/0:27,0:27:12.12:0,12,332	0/0:15,0:15:39.46:0,39,418	0/0:22,0:22:15.13:0,15,306	0/0:11,0:17:29.93:0,30,263	1/1:6,13:18:8.60:387,9,0	0/0:19,0:19:1.94:0,2,114	0/1:29,0:28:43.06:73,0,43	0/0:20,0:20:20.90:0,21,285	0/1:26,0:25:99:298,0,180	0/0:24,0:24:10.05:0,10,266	0/0:52,0:50:41.72:0,42,478	0/1:25,0:24:5.94:6,0,96	0/0:24,0:24:13.07:0,13,255	0/0:20,0:21:47.98:0,48,501	0/0:25,0:25:38.18:0,38,346	0/1:28,0:28:58.44:333,0,58	0/0:21,0:21:8.53:0,9,157	1/1:7,0:7:11.87:87,12,0
chr10	33284259	.	T	TGTGTGC	1563.60	PASS	AB=0.987;AC=13;AF=0.232;AN=56;BaseQRankSum=-3.361;DP=633;FS=0.571;HRun=0;HaplotypeScore=150.0444;InbreedingCoeff=0.4770;MQ=62.62;MQ0=14;MQRankSum=-2.369;QD=8.14;ReadPosRankSum=-1.427;VQSLOD=2.6382;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:45,0:45:42.27:120,0,42	0/1:10,0:10:30.12:69,0,30	0/0:10,0:8:15.01:0,15,137	0/0:16,0:12:26.97:0,27,267	1/1:13,0:13:5.85:104,6,0	1/1:17,0:17:3.01:81,3,0	0/1:20,0:19:20.83:331,0,21	0/0:28,0:27:19.24:0,19,334	1/1:3,9:15:15.04:445,15,0	0/0:25,0:25:60.77:0,61,374	0/0:29,0:29:44.16:0,44,410	0/0:19,0:17:41.90:0,42,360	0/1:23,0:23:5.32:5,0,244	0/0:17,0:16:23.44:0,23,169	1/1:20,0:18:9.03:176,9,0	0/0:22,0:22:17.69:0,18,155	0/1:27,2:28:0.10:392,0,0	0/0:19,0:19:17.74:0,18,206	0/0:29,0:27:34.52:0,35,489	0/0:24,0:24:35.37:0,35,273	0/0:54,0:52:47.62:0,48,468	0/0:25,0:24:23.21:0,23,139	0/0:24,0:24:41.67:0,42,330	0/0:22,0:20:50.17:0,50,424	0/0:23,0:23:38.24:0,38,287	0/0:30,0:30:55.62:0,56,446	0/0:20,0:20:11.69:0,12,145	0/0:5,0:5:11.60:0,12,65
chr10	33284261	.	T	TGC	5828.60	PASS	AB=0.683;AC=31;AF=0.574;AN=54;BaseQRankSum=0.921;DP=637;FS=7.496;HRun=0;HaplotypeScore=97.1923;InbreedingCoeff=0.1308;MQ=62.48;MQ0=17;MQRankSum=2.979;QD=11.34;ReadPosRankSum=4.323;VQSLOD=3.7674;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:10,32:43:24.73:25,0,89	1/1:1,8:9:9.03:148,9,0	0/0:10,0:8:18.02:0,18,171	0/0:19,0:12:30.03:0,30,306	0/0:16,0:16:9.63:0,10,191	./.	0/0:20,0:19:12.44:0,12,264	1/1:28,0:27:14.90:373,15,0	0/1:14,0:14:7.77:39,0,8	1/1:2,22:24:38.67:583,39,0	0/1:7,22:29:21.60:477,0,22	0/0:18,0:16:6.30:0,6,302	0/1:4,19:23:17.66:246,0,18	0/1:17,0:16:10.69:11,0,161	1/1:19,0:17:8.97:80,9,0	0/1:3,19:23:38.95:199,0,39	0/1:9,0:28:31.38:105,0,31	0/1:7,13:21:34.98:146,0,35	1/1:9,21:28:24.46:478,24,0	1/1:1,24:25:27.43:530,27,0	0/1:11,43:52:37.38:491,0,37	1/1:2,20:23:4.88:362,5,0	0/0:22,0:22:23.12:0,23,303	0/1:22,0:20:6.94:7,0,334	1/1:2,20:23:30.37:580,30,0	1/1:3,27:32:52.60:653,53,0	0/1:4,16:20:41.12:210,0,41	1/1:4,0:4:11.88:87,12,0
chr10	33284591	.	AG	A	4496.69	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=11.175;DP=690;FS=2.582;HRun=4;HaplotypeScore=70.1872;InbreedingCoeff=0.9990;MQ=81.16;MQ0=0;MQRankSum=-1.054;QD=31.89;ReadPosRankSum=2.680;VQSLOD=5.6262;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,138,1872	0/0:16,0:16:45.15:0,45,624	0/0:21,0:21:60.11:0,60,747	0/0:36,0:35:89.72:0,90,1209	1/1:1,21:22:53.87:645,54,0	1/1:1,30:31:90.28:1080,90,0	1/1:3,25:28:72.22:864,72,0	0/0:27,0:27:78.24:0,78,1060	1/1:0,30:30:78.24:936,78,0	0/0:20,0:20:51.12:0,51,678	0/0:14,0:14:39.07:0,39,527	0/0:20,0:20:54.18:0,54,756	0/0:30,0:30:84.28:0,84,1176	0/0:22,0:22:63.19:0,63,864	0/0:34,0:34:99:0,99,1386	0/0:27,0:27:72.24:0,72,1007	1/1:2,28:30:81.25:972,81,0	0/0:8,0:8:24.08:0,24,336	0/0:28,0:28:78.24:0,78,1072	0/0:23,0:23:66.22:0,66,923	0/0:24,0:24:63.21:0,63,882	0/0:30,0:30:87.29:0,87,1216	0/0:19,0:19:45.14:0,45,612	0/0:33,0:33:93.31:0,93,1299	0/0:16,0:16:45.14:0,45,615	0/0:24,0:24:69.22:0,69,951	0/0:21,0:20:57.19:0,57,798	0/0:8,0:8:24.08:0,24,335
chr10	33286244	.	A	AGGAG	843.42	PASS	AB=1.000;AC=25;AF=0.735;AN=34;BaseQRankSum=-2.044;DP=73;FS=2.531;HRun=0;HaplotypeScore=20.6475;InbreedingCoeff=0.3977;MQ=74.76;MQ0=0;MQRankSum=-1.620;QD=19.17;ReadPosRankSum=-1.566;VQSLOD=2.7169;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,0:7:3.01:50,3,0	./.	1/1:7,0:2:2.74:12,3,0	0/0:14,0:7:6.99:0,7,41	1/1:0,2:2:6.02:145,6,0	1/1:0,2:2:6.02:146,6,0	1/1:3,4:8:12.04:291,12,0	1/1:3,0:3:4.73:60,5,0	1/1:3,0:3:2.99:24,3,0	0/1:2,0:2:0:0,0,0	./.	./.	0/0:2,0:2:2.37:0,2,8	./.	1/1:0,0:2:3.01:64,3,0	./.	./.	./.	./.	1/1:2,0:2:3.01:36,3,0	1/1:3,0:3:2.99:24,3,0	./.	0/0:3,0:3:9.03:0,9,147	0/0:4,0:4:3.01:0,3,49	./.	1/1:1,0:1:3.01:55,3,0	./.	1/1:2,0:2:5.99:48,6,0
chr10	33286595	.	CTT	C	6774.20	PASS	AB=0.513;AC=31;AF=0.554;AN=56;BaseQRankSum=-11.045;DP=538;FS=4.998;HRun=12;HaplotypeScore=79.9196;InbreedingCoeff=0.8818;MQ=76.90;MQ0=2;MQRankSum=-0.754;QD=21.30;ReadPosRankSum=1.574;VQSLOD=4.5678;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:28:53.40:0,53,234	1/1:0,5:5:12.02:122,12,0	0/0:18,0:16:29.98:0,30,330	0/0:12,0:10:7.16:0,7,52	0/0:2,0:10:27.03:0,27,269	0/0:14,0:29:54.04:0,54,531	0/0:5,0:12:34.30:0,34,358	1/1:6,25:31:75.08:755,75,0	0/0:4,0:19:51.02:0,51,491	1/1:2,14:16:39.05:397,39,0	1/1:1,14:15:33.02:336,33,0	0/0:2,1:16:2.44:0,2,75	1/1:5,17:21:17.88:372,18,0	0/0:1,0:13:32.49:0,32,128	0/0:8,0:31:50.74:0,51,497	1/1:2,23:25:57.11:580,57,0	0/0:10,0:23:57.11:0,57,654	1/1:4,16:20:36.07:366,36,0	1/1:1,11:13:35.81:347,36,0	1/1:3,22:28:56.28:591,56,0	1/1:2,22:24:63.13:641,63,0	1/1:3,15:19:26.48:379,26,0	0/1:1,2:20:19.57:20,0,117	0/0:3,0:8:15.97:0,16,83	1/1:3,10:13:33.06:333,33,0	1/1:3,19:24:50.79:562,51,0	1/1:5,26:31:75.14:761,75,0	1/1:1,10:11:21.04:214,21,0
chr10	33287979	.	ATGTGTGTGTGTGTGTGTGTG	A	2596.70	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=5.939;DP=511;FS=15.858;HRun=0;HaplotypeScore=228.0255;InbreedingCoeff=0.7982;MQ=60.40;MQ0=14;MQRankSum=-5.948;QD=30.19;ReadPosRankSum=2.520;VQSLOD=0.7603;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:44:35.15:0,35,1716	0/0:10,0:9:18.06:0,18,1438	0/0:20,0:8:3.01:0,3,125	0/0:27,0:14:18.06:0,18,616	1/1:13,10:23:9.03:481,9,0	1/1:10,6:16:15.05:802,15,0	1/1:14,5:19:3.01:160,3,0	0/0:20,0:20:27.09:0,27,1278	1/1:8,11:19:24.05:1144,24,0	0/0:18,0:18:36.12:0,36,2631	0/0:22,0:22:18.06:0,18,1615	0/0:11,0:18:30.09:0,30,784	0/0:10,0:11:15.05:0,15,878	0/0:8,0:13:30.09:0,30,690	0/0:8,0:13:14.95:0,15,224	0/0:14,0:14:18.06:0,18,1591	1/1:5,4:9:3.01:160,3,0	0/0:11,0:12:26.45:0,26,1859	0/0:13,0:13:9.03:0,9,652	0/0:23,0:25:36.12:0,36,2551	0/0:16,0:18:33.11:0,33,2631	0/0:15,0:15:30.09:0,30,2182	0/0:10,0:16:12.04:0,12,356	0/0:13,0:18:6.02:0,6,297	0/0:22,0:24:42.14:0,42,3156	0/0:18,0:19:33.11:0,33,2505	0/0:21,0:21:39.13:0,39,2843	0/0:11,0:11:18.06:0,18,1071
chr10	33289401	.	GGTGTGTGTGTGTGT	G	656.27	PASS	AB=0.909;AC=12;AF=0.240;AN=50;BaseQRankSum=4.155;DP=591;FS=0.000;HRun=0;HaplotypeScore=194.6677;InbreedingCoeff=0.2653;MQ=62.72;MQ0=21;MQRankSum=-4.339;QD=4.59;ReadPosRankSum=-1.339;VQSLOD=2.5512;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:33:18.06:0,18,567	0/1:11,0:12:17.35:17,0,176	./.	./.	0/0:18,0:20:3:0,3,25	0/0:12,0:16:9.87:0,10,176	0/1:14,0:13:5.71:6,0,162	0/0:25,0:25:17.03:0,17,214	0/0:20,0:23:5.82:0,6,383	0/0:18,0:15:5.23:0,5,75	0/0:11,0:10:3.01:0,3,119	1/1:17,0:17:3.01:100,3,0	0/0:21,0:21:20.85:0,21,969	1/1:21,6:28:15.05:482,15,0	0/1:21,0:23:63.39:63,0,73	0/0:14,0:14:18.04:0,18,468	0/0:22,0:24:16.19:0,16,227	0/0:16,0:16:18.04:0,18,496	0/0:9,0:9:3.01:0,3,90	0/0:14,0:15:18.06:0,18,539	0/0:49,0:47:18.06:0,18,582	0/0:17,0:16:3.01:0,3,93	1/1:12,0:15:1.55:4,2,0	1/1:21,0:21:3:99,3,0	0/1:10,0:11:20.41:20,0,127	0/0:23,0:23:18.04:0,18,341	0/0:15,0:17:12.04:0,12,309	./.
chr10	33293168	.	A	AAT	18219.98	PASS	AB=0.563;AC=51;AF=0.911;AN=56;BaseQRankSum=-1.597;DP=544;FS=0.885;HRun=0;HaplotypeScore=110.7117;InbreedingCoeff=0.7198;MQ=64.80;MQ0=2;MQRankSum=-6.141;QD=35.04;ReadPosRankSum=4.289;VQSLOD=7.0256;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,19:24:36.12:592,36,0	1/1:3,2:5:6.02:101,6,0	0/0:8,0:7:18.06:0,18,231	0/0:16,0:16:31.39:0,31,420	1/1:7,20:27:48.16:795,48,0	1/1:6,21:28:66.12:1077,66,0	1/1:4,16:20:36.12:607,36,0	1/1:13,29:43:99:1640,99,0	1/1:6,15:21:42.14:705,42,0	1/1:3,16:20:51.17:855,51,0	1/1:2,18:20:45.15:757,45,0	0/1:2,7:9:16.25:283,0,16	1/1:6,16:23:45.15:753,45,0	1/1:3,12:15:30.10:505,30,0	1/1:4,9:13:30.10:504,30,0	1/1:4,11:15:27.09:455,27,0	1/1:2,20:22:51.17:859,51,0	1/1:3,12:15:36.12:607,36,0	1/1:6,18:24:63.21:1028,63,0	1/1:4,17:21:45.15:758,45,0	1/1:1,4:6:9.03:151,9,0	1/1:5,11:17:30.09:482,30,0	1/1:4,21:24:48.15:784,48,0	1/1:1,7:8:21.07:354,21,0	1/1:6,22:28:63.22:1062,63,0	1/1:8,22:29:69.23:1145,69,0	1/1:7,21:29:66.23:1108,66,0	1/1:3,7:10:15.05:252,15,0
chr10	33293200	.	AAC	A	5158.22	PASS	AB=0.833;AC=29;AF=0.518;AN=56;BaseQRankSum=-2.761;DP=577;FS=5.633;HRun=0;HaplotypeScore=203.4177;InbreedingCoeff=0.9244;MQ=54.22;MQ0=5;MQRankSum=6.205;QD=18.29;ReadPosRankSum=-0.302;VQSLOD=4.5384;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:21:24.75:0,25,248	1/1:4,1:5:14.58:142,15,0	0/0:38,0:18:49.69:0,50,537	0/0:37,0:15:30.73:0,31,290	0/0:29,0:29:37.53:0,38,494	0/0:32,0:32:57.23:0,57,617	0/0:19,0:19:22.79:0,23,263	1/1:15,6:21:44.27:541,44,0	0/0:23,0:23:44.67:0,45,407	1/1:17,6:23:53.13:535,53,0	1/1:15,5:20:22.97:269,23,0	0/0:10,0:10:21.02:0,21,246	1/1:16,7:23:28.19:337,28,0	0/0:8,0:8:4.81:0,5,172	0/0:24,0:24:55.77:0,56,436	1/1:11,6:17:27.56:262,28,0	0/0:16,0:16:20.74:0,21,288	0/1:12,3:15:3.26:204,0,3	1/1:16,4:20:34.96:535,35,0	1/1:14,8:22:21.99:261,22,0	1/1:11,3:14:26.44:262,26,0	1/1:10,3:13:14.63:123,15,0	0/0:21,0:21:56.33:0,56,751	0/0:16,0:16:30.07:0,30,361	1/1:18,7:25:46.63:473,47,0	1/1:15,8:23:24.20:555,24,0	1/1:24,9:32:22.53:455,23,0	1/1:5,3:8:21.15:202,21,0
chr10	33293208	.	C	CAG	1673.12	PASS	AB=0.988;AC=20;AF=0.357;AN=56;BaseQRankSum=0.503;DP=607;FS=25.120;HRun=0;HaplotypeScore=229.4735;InbreedingCoeff=0.2253;MQ=50.65;MQ0=6;MQRankSum=5.956;QD=5.38;ReadPosRankSum=0.834;VQSLOD=1.4366;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:23:20.24:0,20,357	0/1:7,0:7:21.50:23,0,21	0/0:38,0:18:48.25:0,48,686	0/0:33,0:11:19.77:0,20,384	0/0:30,0:30:38.95:0,39,549	0/0:29,0:29:66.66:0,67,879	0/0:15,0:15:24.07:0,24,323	1/1:18,0:18:14.03:250,14,0	0/0:22,0:22:54.17:0,54,704	1/1:23,0:23:21.35:250,21,0	0/1:24,0:24:26.92:72,0,27	0/0:9,0:9:27.08:0,27,390	0/1:23,2:25:9.30:139,0,9	0/0:9,0:9:24.04:0,24,303	0/0:25,0:25:59.86:0,60,851	1/1:16,0:16:8.41:69,8,0	0/0:17,0:17:27.09:0,27,386	0/1:18,0:17:60.89:61,0,78	0/1:22,0:22:1.80:218,0,2	0/1:23,0:23:29.23:46,0,29	1/1:17,0:17:1.84:73,2,0	0/1:17,0:17:10.94:54,0,11	0/0:26,0:26:72.13:0,72,979	0/0:19,0:19:33.09:0,33,478	0/1:28,0:28:12.44:163,0,12	0/1:25,0:25:39.63:171,0,40	0/1:37,2:37:99:159,0,125	1/1:9,0:9:15.95:107,16,0
chr10	33293210	.	CAG	C	1351.32	PASS	AB=0.978;AC=26;AF=0.464;AN=56;BaseQRankSum=-5.350;DP=606;FS=1.220;HRun=0;HaplotypeScore=224.0087;InbreedingCoeff=-0.4655;MQ=50.46;MQ0=8;MQRankSum=-1.131;QD=2.56;ReadPosRankSum=-6.250;VQSLOD=0.8178;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:22:15.12:15,0,104	0/1:7,0:7:3.81:28,0,4	0/1:38,0:18:1.65:2,0,142	0/1:34,0:11:27.38:27,0,86	0/1:30,0:30:51.06:51,0,213	0/1:29,0:29:42.53:43,0,256	0/1:15,0:15:36.15:36,0,94	1/1:19,0:19:20.20:186,20,0	0/1:22,0:22:17.56:18,0,191	0/1:21,1:22:0.16:102,0,0	0/1:23,1:24:58.22:58,0,58	0/0:9,0:9:18.52:0,19,97	0/1:24,1:25:45.14:45,0,74	0/1:9,0:9:42.54:49,0,43	0/0:24,0:24:20.50:0,20,132	0/1:17,0:17:19.09:68,0,19	0/1:17,0:17:20.22:20,0,126	0/1:18,1:18:51.22:69,0,51	1/1:22,0:21:18.83:152,19,0	0/1:22,0:22:28.46:55,0,28	0/1:17,1:18:15.88:74,0,16	0/1:15,2:17:7.39:7,0,54	0/0:26,0:26:18.18:0,18,316	0/0:19,0:19:24.15:0,24,134	0/1:26,0:26:46.35:76,0,46	0/1:26,0:26:39.43:162,0,39	0/1:36,2:36:99:102,0,155	0/1:8,1:9:6.84:65,0,7
chr10	33293212	.	GACACACAC	G	4865.96	PASS	AB=1.000;AC=19;AF=0.352;AN=54;BaseQRankSum=-7.538;DP=612;FS=0.000;HRun=0;HaplotypeScore=269.2892;InbreedingCoeff=0.4985;MQ=50.02;MQ0=9;MQRankSum=-4.453;QD=19.08;ReadPosRankSum=0.414;VQSLOD=3.8105;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:16,6:22:6.13:364,6,0	0/0:7,0:7:12.04:0,12,296	0/0:39,0:17:13.17:0,13,118	./.	1/1:15,12:29:29.81:573,30,0	1/1:19,11:30:60.14:1207,60,0	1/1:11,3:14:21.97:335,22,0	0/1:21,0:21:61.74:62,0,178	1/1:10,12:22:51.14:1113,51,0	0/0:22,0:22:29.83:0,30,927	0/0:25,0:25:1.98:0,2,847	0/0:9,0:9:18.04:0,18,322	0/0:26,0:26:45.07:0,45,1095	0/0:8,0:8:6.08:0,6,292	1/1:23,1:24:56.87:745,57,0	0/0:17,0:17:25.56:0,26,620	1/1:16,1:17:23.68:316,24,0	0/1:19,0:18:22.18:22,0,453	0/1:22,0:21:10.69:11,0,497	0/0:22,0:22:7.82:0,8,660	0/0:21,0:20:21.61:0,22,638	0/0:16,0:16:36.12:0,36,974	0/0:25,0:25:28.02:0,28,711	0/0:19,0:19:13.30:0,13,372	0/0:26,0:26:16.99:0,17,935	0/1:25,0:25:52.40:52,0,904	0/0:39,0:37:4.73:0,5,1858	0/1:9,0:9:66.70:67,0,268
chr10	33293230	.	C	CAT	5504.93	PASS	AB=0.987;AC=30;AF=0.536;AN=56;BaseQRankSum=-5.913;DP=616;FS=4.432;HRun=0;HaplotypeScore=202.9840;InbreedingCoeff=0.5669;MQ=47.40;MQ0=17;MQRankSum=4.633;QD=15.00;ReadPosRankSum=1.075;VQSLOD=4.6295;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:32.82:0,33,203	1/1:6,0:6:11.48:90,11,0	0/0:27,0:9:17.70:0,18,175	0/0:34,0:4:11.96:0,12,106	0/0:29,0:29:49.16:0,49,302	0/0:28,0:28:63.68:0,64,406	0/0:17,0:17:29:0,29,189	1/1:24,2:26:39.57:494,40,0	0/0:22,0:22:58.21:0,58,359	1/1:19,1:20:19.18:510,19,0	0/1:24,1:25:51.97:298,0,52	0/1:10,0:10:5.84:6,0,59	1/1:24,1:25:45.27:509,45,0	0/1:10,0:10:16.50:16,0,21	0/0:28,0:28:55.35:0,55,341	1/1:21,0:21:38.84:351,39,0	0/0:16,0:16:22.21:0,22,141	0/1:17,0:16:44.22:190,0,44	0/1:22,1:18:24.10:327,0,24	1/1:22,0:22:30.27:278,30,0	1/1:26,1:26:11.92:379,12,0	1/1:16,1:17:39:515,39,0	0/1:23,0:23:27.34:27,0,183	0/0:24,0:24:15.64:0,16,67	1/1:23,0:23:28.06:401,28,0	1/1:26,1:25:15.59:376,16,0	1/1:36,0:33:48.12:532,48,0	1/1:9,0:9:23.59:203,24,0
chr10	33293232	.	CACACAT	C	3461.73	PASS	AB=1.000;AC=24;AF=0.429;AN=56;BaseQRankSum=-4.772;DP=608;FS=0.379;HRun=0;HaplotypeScore=237.1568;InbreedingCoeff=-0.4835;MQ=48.79;MQ0=16;MQRankSum=-5.344;QD=7.64;ReadPosRankSum=-7.333;VQSLOD=0.3382;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:24:99:102,0,100	0/1:6,0:6:9.91:10,0,184	0/0:24,0:9:8.10:0,8,116	0/0:32,0:4:11.70:0,12,106	0/1:30,0:30:77.29:77,0,120	0/1:28,0:28:99:282,0,102	0/1:17,0:17:67.97:94,0,68	1/1:27,0:27:13.37:333,13,0	0/1:22,0:22:39.93:302,0,40	0/1:20,0:20:70.84:71,0,525	0/0:24,0:24:3.69:0,4,461	0/1:10,0:10:29.67:66,0,30	0/1:25,0:25:44.83:45,0,648	0/1:10,0:10:48.54:73,0,49	1/1:3,25:28:56.90:1179,57,0	0/1:21,0:21:99:117,0,370	0/1:17,0:17:67.01:83,0,67	0/1:17,0:16:92.94:93,0,177	0/1:22,0:17:77.47:77,0,306	0/1:23,0:23:51.47:51,0,423	0/1:27,0:26:99:150,0,324	0/0:16,0:16:36.98:0,37,601	0/1:21,0:21:89.63:122,0,90	0/1:25,0:25:23.91:24,0,45	0/0:23,0:23:36.01:0,36,621	0/1:26,0:24:96.80:97,0,540	0/0:36,0:33:40.59:0,41,1261	0/1:7,0:7:14.83:15,0,159
chr10	33293234	.	CACAT	C	3457.77	PASS	AB=0.992;AC=30;AF=0.536;AN=56;BaseQRankSum=-4.480;DP=612;FS=0.755;HRun=0;HaplotypeScore=220.2621;InbreedingCoeff=-0.2947;MQ=50.17;MQ0=15;MQRankSum=-3.562;QD=6.94;ReadPosRankSum=-5.618;VQSLOD=1.1772;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:24:40.41:40,0,119	0/1:6,0:6:10.03:10,0,90	0/0:24,0:10:11.06:0,11,104	0/0:32,0:6:17.53:0,18,116	0/1:28,0:28:35.63:36,0,132	0/1:26,1:27:99:122,0,153	0/1:16,1:17:51.65:52,0,103	1/1:29,0:29:31.70:431,32,0	0/1:22,0:22:50.93:142,0,51	0/1:20,0:20:99:107,0,232	0/1:24,0:24:45.38:45,0,231	1/1:9,2:11:28.73:216,29,0	0/1:26,0:26:65.13:65,0,330	1/1:10,1:11:22.13:166,22,0	1/1:28,0:28:56.63:614,57,0	0/1:21,0:21:99:177,0,176	0/1:15,1:16:67.72:68,0,92	0/1:17,0:16:72.19:137,0,72	0/1:22,0:17:79:79,0,127	0/1:22,0:22:51.72:52,0,209	0/1:28,0:27:99:178,0,123	0/1:18,0:18:34.26:34,0,264	1/1:21,1:22:55.67:386,56,0	1/1:24,1:25:22.26:150,22,0	0/0:21,0:21:13.63:0,14,304	0/1:27,0:25:99:136,0,251	0/0:37,0:34:19.81:0,20,663	0/1:7,0:7:14.87:15,0,85
chr10	33293236	.	CAT	C	4476.55	PASS	AB=0.997;AC=34;AF=0.607;AN=56;BaseQRankSum=-4.832;DP=612;FS=1.242;HRun=0;HaplotypeScore=197.6571;InbreedingCoeff=-0.2066;MQ=51.61;MQ0=15;MQRankSum=-0.846;QD=8.04;ReadPosRankSum=-5.117;VQSLOD=3.7933;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:25:3.96:4,0,158	0/1:7,0:7:2.03:51,0,2	0/0:24,0:10:11.06:0,11,104	0/0:31,0:7:20.21:0,20,127	0/1:28,0:28:9.48:9,0,178	0/1:27,0:27:3.27:3,0,230	0/1:17,0:17:28.67:29,0,118	1/1:29,0:29:59.54:535,60,0	0/1:23,0:23:24.21:24,0,139	1/1:20,1:21:10.22:204,10,0	0/1:23,0:23:50.29:87,0,50	1/1:8,3:11:30.03:352,30,0	0/1:25,0:25:45.82:97,0,46	1/1:7,4:11:30.02:333,30,0	1/1:28,0:28:53.13:386,53,0	0/1:20,1:21:10.51:204,0,11	0/1:16,0:16:56.61:57,0,95	0/1:16,0:15:3.19:143,0,3	0/1:22,0:17:0.03:142,0,0	0/1:22,0:22:16.64:89,0,17	1/1:29,0:28:20.89:266,21,0	0/1:19,0:19:26.76:86,0,27	1/1:16,6:22:60:669,60,0	1/1:2,23:25:23.83:319,24,0	0/1:21,0:21:47.33:47,0,54	0/1:26,0:24:5.31:254,0,5	0/1:36,0:33:68.27:68,0,142	0/1:7,0:7:16.73:17,0,19
chr10	33294295	.	C	CA	4238.69	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-4.608;DP=630;FS=7.416;HRun=9;HaplotypeScore=82.8459;InbreedingCoeff=0.9356;MQ=79.38;MQ0=0;MQRankSum=-1.717;QD=20.09;ReadPosRankSum=0.898;VQSLOD=5.1735;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,1:38:50.79:0,51,764	0/0:12,0:12:32.98:0,33,284	0/0:21,0:21:40.16:0,40,314	0/0:11,0:12:9.49:0,9,81	1/1:6,36:42:73.09:996,73,0	1/1:1,18:20:53.94:565,54,0	1/1:0,21:21:54.15:597,54,0	0/0:31,0:31:83.97:0,84,729	1/1:3,24:28:66.01:711,66,0	0/0:25,0:25:62.97:0,63,545	0/0:34,0:34:95.88:0,96,817	1/1:5,2:17:23.06:152,23,0	0/0:18,0:18:44.75:0,45,390	1/1:1,1:17:37.10:204,37,0	0/0:16,0:16:35.96:0,36,308	0/0:26,0:26:71.98:0,72,625	1/1:3,24:28:56.99:612,57,0	0/0:15,0:15:11.57:0,12,255	0/0:25,0:25:56.93:0,57,484	0/0:23,2:25:3.81:0,4,436	0/0:21,0:21:53.99:0,54,469	0/0:16,0:16:29.97:0,30,257	1/1:6,1:28:51.37:275,51,0	1/1:0,0:10:25.57:128,26,0	0/0:24,0:24:68.95:0,69,591	0/0:20,0:20:50.97:0,51,440	0/0:37,0:37:89.94:0,90,777	0/0:3,0:3:2.98:0,3,26
chr10	33294707	.	GCACATACACA	G	1571.80	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=-0.344;DP=617;FS=0.563;HRun=0;HaplotypeScore=206.1759;InbreedingCoeff=0.2045;MQ=72.67;MQ0=6;MQRankSum=-0.575;QD=11.64;ReadPosRankSum=0.760;VQSLOD=2.3843;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:34:99:160,0,505	0/0:12,0:12:30.07:0,30,557	0/0:24,0:17:23.96:0,24,286	0/0:38,0:31:54.44:0,54,637	0/0:21,0:21:44.94:0,45,555	0/0:30,0:30:47.47:0,47,718	0/0:23,0:23:45.05:0,45,1166	0/0:27,0:25:66.05:0,66,696	0/0:17,0:16:11.84:0,12,116	0/0:24,0:24:72.15:0,72,1226	0/0:22,0:22:57.06:0,57,1013	0/1:16,0:16:70.25:70,0,845	0/0:20,0:20:44.63:0,45,545	0/1:15,0:15:1.82:2,0,1215	1/1:2,31:34:39.13:1238,39,0	0/0:24,0:24:53.33:0,53,1103	0/0:24,0:23:47.93:0,48,1486	0/0:10,0:10:21.93:0,22,428	0/0:22,0:22:60.06:0,60,862	0/0:16,0:16:42.05:0,42,733	0/0:18,0:18:32.91:0,33,324	0/0:15,0:15:34.84:0,35,544	0/1:14,0:14:69.28:69,0,386	0/1:22,0:22:99:163,0,715	0/0:10,0:10:27.02:0,27,471	0/0:31,0:30:84.03:0,84,1357	0/0:36,0:36:92.99:0,93,1886	0/0:18,0:18:38.92:0,39,451
chr10	33294710	.	CAT	C	1387.60	PASS	AB=0.970;AC=12;AF=0.214;AN=56;BaseQRankSum=3.810;DP=642;FS=25.683;HRun=0;HaplotypeScore=133.3001;InbreedingCoeff=0.2433;MQ=67.59;MQ0=8;MQRankSum=-0.038;QD=6.14;ReadPosRankSum=-0.368;VQSLOD=1.3977;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:35,0:35:47.44:371,47,0	0/1:9,1:10:3.02:3,0,108	0/0:23,0:16:22.35:0,22,279	0/0:33,0:26:54.25:0,54,607	0/0:21,0:21:44.88:0,45,365	0/0:26,0:26:24.16:0,24,341	0/0:23,0:23:45:0,45,445	0/0:30,0:28:73.13:0,73,597	0/1:17,0:16:8.92:9,0,64	0/0:26,0:26:57.57:0,58,485	0/0:26,0:26:38.41:0,38,269	0/1:19,0:19:45.09:156,0,45	0/0:21,0:21:4.71:0,5,184	0/1:19,0:19:86.33:112,0,86	1/1:35,0:35:39.23:285,39,0	0/0:23,1:24:27.59:0,28,206	0/0:25,0:25:19.96:0,20,373	0/1:10,1:11:3.40:3,0,79	0/0:23,0:23:50.93:0,51,395	0/0:18,0:18:39.18:0,39,266	0/0:19,0:18:30.54:0,31,244	0/0:17,0:16:31.95:0,32,222	0/1:17,0:17:9.84:179,0,10	0/1:25,2:27:7.01:420,0,7	0/0:13,0:13:24.26:0,24,161	0/0:30,0:29:57.17:0,57,549	0/1:36,0:36:1.82:2,0,261	0/0:17,0:17:38.33:0,38,279
chr10	33294712	.	T	TACACACACACAC	2980.56	PASS	AB=1.000;AC=18;AF=0.346;AN=52;BaseQRankSum=-6.840;DP=661;FS=6.455;HRun=0;HaplotypeScore=268.6434;InbreedingCoeff=0.5108;MQ=64.65;MQ0=8;MQRankSum=1.289;QD=11.04;ReadPosRankSum=-5.177;VQSLOD=0.9936;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:34,0:34:20.04:309,20,0	0/0:9,0:9:10.48:0,10,282	./.	./.	1/1:14,7:29:3.01:174,3,0	1/1:25,0:26:17.92:278,18,0	1/1:23,0:23:26.32:526,26,0	0/0:30,0:28:6.48:0,6,17	1/1:17,0:16:9.01:176,9,0	0/0:28,0:28:12.93:0,13,226	0/0:28,0:28:14.31:0,14,437	0/1:20,0:20:86.37:110,0,86	0/0:22,0:22:16.70:0,17,309	0/1:20,0:20:81.76:415,0,82	0/0:33,0:33:39.58:0,40,888	0/0:26,0:25:32.59:0,33,841	1/1:27,0:26:44.30:968,44,0	0/0:12,0:12:13.23:0,13,366	0/0:24,0:24:5.55:0,6,173	0/0:20,0:19:15.05:0,15,418	0/0:20,0:19:1.26:0,1,81	0/0:19,0:18:8.40:0,8,279	1/1:17,0:17:11.48:97,11,0	0/1:28,0:27:99:103,0,268	0/0:14,0:14:12.04:0,12,334	0/1:29,0:28:4.19:4,0,422	0/0:39,0:39:41.94:0,42,1401	0/0:14,0:14:2.93:0,3,83
chr10	33294747	.	ACACAC	A	2882.25	PASS	AB=1.000;AC=27;AF=0.482;AN=56;BaseQRankSum=4.303;DP=669;FS=28.447;HRun=0;HaplotypeScore=152.3094;InbreedingCoeff=0.6295;MQ=55.14;MQ0=50;MQRankSum=-1.805;QD=7.26;ReadPosRankSum=2.585;VQSLOD=0.8062;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:67.70:0,68,1169	0/1:14,0:11:1.39:32,0,1	0/0:21,0:12:36.10:0,36,417	0/0:27,0:17:48.12:0,48,555	0/0:20,0:20:21.04:0,21,303	0/0:22,0:22:34.71:0,35,536	0/0:24,0:24:48.14:0,48,930	1/1:36,0:29:51.66:651,52,0	0/0:19,0:18:19.92:0,20,257	0/1:26,0:22:14.13:339,0,14	1/1:27,0:25:28.90:211,29,0	0/0:22,0:22:56.30:0,56,1099	1/1:24,2:23:16.69:239,17,0	0/0:20,0:20:48.08:0,48,1147	0/1:34,0:34:99:114,0,191	0/1:33,0:28:13.02:72,0,13	0/0:27,0:26:57.63:0,58,1256	1/1:11,0:10:18.51:109,19,0	1/1:24,2:21:9.71:421,10,0	1/1:26,0:20:20.73:98,21,0	0/1:19,0:17:6.08:6,0,8	1/1:22,0:16:1.87:140,2,0	0/0:11,0:11:26.96:0,27,603	0/0:20,0:19:42.02:0,42,810	1/1:19,0:18:10.63:42,11,0	1/1:32,2:27:34.56:401,35,0	1/1:35,0:34:31.03:201,31,0	1/1:9,0:7:2.60:10,3,0
chr10	33294749	.	ACAC	A	7089.28	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-1.998;DP=649;FS=36.195;HRun=0;HaplotypeScore=121.2477;InbreedingCoeff=0.9549;MQ=58.13;MQ0=50;MQRankSum=-2.820;QD=20.26;ReadPosRankSum=0.042;VQSLOD=2.9657;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:67.02:0,67,945	1/1:4,10:11:20.99:308,21,0	0/0:21,0:14:42.12:0,42,488	0/0:27,0:18:51.09:0,51,574	0/0:14,0:14:18.05:0,18,231	0/0:21,0:21:32.01:0,32,422	0/0:24,0:24:48.16:0,48,772	1/1:8,30:31:66.12:878,66,0	0/0:20,0:19:23.41:0,23,280	1/1:18,6:20:49.94:699,50,0	1/1:6,19:23:51.38:620,51,0	0/0:22,0:22:56.30:0,56,813	1/1:6,20:23:17.88:276,18,0	0/0:20,0:20:48.08:0,48,835	0/0:34,0:34:25.99:0,26,277	1/1:7,26:28:30.94:576,31,0	0/0:27,0:26:57.62:0,58,955	1/1:4,7:10:21.05:340,21,0	1/1:8,16:19:43.03:557,43,0	1/1:8,17:19:24.44:342,24,0	1/1:5,14:17:6.93:79,7,0	1/1:11,8:13:20.91:263,21,0	0/0:11,0:11:27.06:0,27,445	0/0:19,0:18:41.99:0,42,585	1/1:2,17:18:12.04:223,12,0	1/1:14,18:25:56.73:743,57,0	1/1:4,29:32:63.21:1128,63,0	1/1:3,5:6:3.01:56,3,0
chr10	33294751	.	AC	A	4098.64	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=0.598;DP=648;FS=24.932;HRun=1;HaplotypeScore=118.2770;InbreedingCoeff=0.9534;MQ=58.67;MQ0=50;MQRankSum=-1.257;QD=11.74;ReadPosRankSum=0.927;VQSLOD=0.7867;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:65.42:0,65,781	1/1:13,1:11:14.95:116,15,0	0/0:21,0:14:42.12:0,42,488	0/0:24,1:19:54.10:0,54,609	0/0:15,0:15:21.03:0,21,228	0/0:21,0:21:28.54:0,29,325	0/0:25,0:25:51.11:0,51,617	1/1:37,1:31:63.56:761,64,0	0/0:20,0:19:23.25:0,23,280	1/1:24,0:20:48.15:491,48,0	1/1:25,0:23:39.58:291,40,0	0/0:22,0:22:58.68:0,59,573	1/1:26,0:23:17.47:135,17,0	0/0:20,0:20:48.05:0,48,581	0/0:34,0:34:61.26:0,61,450	1/1:29,4:28:32.34:269,32,0	0/0:28,0:27:56.88:0,57,682	1/1:10,1:10:20.85:171,21,0	1/1:22,2:19:40.94:428,41,0	1/1:23,2:19:21.37:156,21,0	1/1:17,2:17:6.94:67,7,0	1/1:15,3:12:20.76:144,21,0	0/0:11,0:11:26.93:0,27,267	0/0:19,0:18:44.83:0,45,451	1/1:18,1:18:11.95:91,12,0	1/1:29,3:25:48.73:475,49,0	1/1:31,2:32:62.76:480,63,0	1/1:8,0:6:2.99:23,3,0
chr10	33294752	.	C	CA	2835.96	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=1.509;DP=655;FS=22.983;HRun=3;HaplotypeScore=127.3426;InbreedingCoeff=0.9458;MQ=59.44;MQ0=50;MQRankSum=-2.556;QD=7.92;ReadPosRankSum=0.183;VQSLOD=-0.1835;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:62.51:0,63,684	1/1:11,3:11:13.29:80,13,0	0/0:22,0:15:42.12:0,42,491	0/0:25,0:19:54.10:0,54,612	0/0:16,0:16:19.28:0,19,203	0/0:23,0:23:22.57:0,23,255	0/0:25,0:25:47.40:0,47,482	1/1:36,4:33:60.65:750,61,0	0/0:20,0:19:23.13:0,23,271	1/1:9,15:20:45.11:424,45,0	1/1:20,5:23:31.36:218,31,0	0/0:18,0:19:46.91:0,47,372	1/1:22,4:23:14.77:59,15,0	0/0:20,0:20:47.38:0,47,426	0/0:33,0:33:63.53:0,64,623	1/1:31,3:29:27.31:97,27,0	0/0:28,0:27:49.84:0,50,505	1/1:8,3:10:19.26:156,19,0	1/1:23,2:20:36.63:400,37,0	1/1:22,4:20:18.90:87,19,0	1/1:17,2:17:6.40:31,6,0	1/1:12,6:12:18.84:138,19,0	0/0:10,0:10:20.42:0,20,160	0/0:19,0:18:43.25:0,43,313	1/1:19,1:19:9.98:35,10,0	1/1:27,5:25:44.46:370,44,0	1/1:35,1:35:49.99:208,50,0	1/1:6,2:6:2.50:9,2,0
chr10	33296617	.	T	TGTGCATGT	316.46	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=4.353;DP=910;FS=10.938;HRun=0;HaplotypeScore=298.2142;InbreedingCoeff=0.1549;MQ=56.64;MQ0=9;MQRankSum=-2.540;QD=1.43;ReadPosRankSum=-3.476;VQSLOD=0.3842;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:38,23:67:20.96:268,21,0	0/0:22,0:22:54.19:0,54,1392	0/0:50,0:24:34.38:0,34,453	0/0:62,0:34:13.50:0,13,295	0/0:44,0:44:10.61:0,11,369	0/1:27,0:27:56.60:57,0,69	0/1:41,0:41:20.07:20,0,291	0/0:34,0:34:68.94:0,69,1302	0/1:26,0:26:32.35:32,0,55	0/0:26,0:26:69.17:0,69,1565	0/0:19,0:19:51.05:0,51,1098	0/0:31,0:31:8.96:0,9,581	0/0:26,0:26:63.17:0,63,1498	0/0:39,0:39:4.99:0,5,533	0/0:25,0:25:66.18:0,66,1593	0/0:25,0:25:57.18:0,57,1323	0/1:27,0:27:63.68:64,0,171	0/0:20,0:20:48.03:0,48,1180	0/0:29,0:28:44.27:0,44,889	0/0:33,0:33:93.25:0,93,2249	0/0:52,0:52:99:0,123,2818	0/0:21,0:21:54.19:0,54,1313	0/1:33,0:33:9.93:10,0,652	0/0:36,0:36:11.70:0,12,576	0/0:28,0:28:60.17:0,60,1433	0/0:29,0:29:68.86:0,69,1549	0/0:28,0:28:60.21:0,60,1443	0/0:10,0:10:30.10:0,30,711
chr10	33297260	.	CCAT	C	1384.08	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.105;DP=752;FS=9.768;HRun=0;HaplotypeScore=119.8293;InbreedingCoeff=0.9833;MQ=91.86;MQ0=0;MQRankSum=-3.337;QD=28.25;ReadPosRankSum=1.370;VQSLOD=3.8101;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,42:49:93.26:1479,93,0	0/0:9,0:9:27.09:0,27,602	0/0:30,0:30:39.17:0,39,1369	0/0:32,0:32:68.43:0,68,1295	0/0:29,0:29:87.30:0,87,1922	0/0:35,0:35:96.33:0,96,2142	0/0:25,0:25:69.24:0,69,1540	0/0:42,0:42:99:0,105,2282	0/0:25,0:25:66.23:0,66,1453	0/0:31,0:31:93.32:0,93,2065	0/0:12,0:12:36.12:0,36,802	0/0:27,0:27:81.26:0,81,1746	0/0:35,0:35:96.33:0,96,2081	0/0:23,0:23:66.23:0,66,1470	0/0:38,0:38:99:0,114,2547	0/0:31,0:31:87.30:0,87,1941	0/0:28,0:28:78.25:0,78,1695	0/0:22,0:22:60.21:0,60,1336	0/0:31,0:31:87.30:0,87,1922	0/0:19,0:19:54.19:0,54,1189	0/0:21,0:21:57.17:0,57,1208	0/0:23,0:23:69.22:0,69,1458	0/0:29,0:29:84.29:0,84,1876	0/0:23,0:22:66.23:0,66,1471	0/0:27,0:27:78.27:0,78,1741	0/0:26,0:26:78.27:0,78,1743	0/0:24,0:24:69.24:0,69,1528	0/0:6,0:6:15.05:0,15,335
chr10	33298356	.	TA	T	293.19	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.384;DP=483;FS=3.510;HRun=8;HaplotypeScore=47.6654;InbreedingCoeff=0.7054;MQ=72.43;MQ0=0;MQRankSum=-2.306;QD=13.96;ReadPosRankSum=0.528;VQSLOD=3.0530;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,15:21:26.38:387,26,0	0/0:8,0:8:15.05:0,15,179	0/0:9,0:9:2.43:0,2,148	0/0:13,0:13:32.83:0,33,366	0/0:37,0:37:99:0,108,1297	0/0:11,0:11:33.10:0,33,399	0/0:10,0:10:24.07:0,24,290	0/0:27,0:27:69.21:0,69,832	0/0:16,0:16:45.14:0,45,543	0/0:24,0:24:66.19:0,66,778	0/0:25,0:25:69.21:0,69,828	0/0:13,0:13:39.12:0,39,471	0/0:11,0:11:33.10:0,33,399	0/0:17,0:17:42.13:0,42,507	0/0:20,0:20:48.15:0,48,579	0/0:22,0:22:54.14:0,54,632	0/0:18,0:18:54.15:0,54,641	0/0:17,0:17:51.16:0,51,614	0/0:20,0:20:51.14:0,51,605	0/0:24,0:24:63.19:0,63,760	0/0:5,0:5:12.04:0,12,145	0/0:8,0:8:9.03:0,9,108	0/0:15,0:15:39.12:0,39,471	0/0:11,0:11:24.07:0,24,288	0/0:27,0:27:81.25:0,81,978	0/0:19,0:19:54.17:0,54,652	0/0:32,0:32:84.21:0,84,977	0/0:3,0:3:6.02:0,6,72
chr10	33300101	.	A	AGT	12636.03	PASS	AB=0.676;AC=34;AF=0.607;AN=56;BaseQRankSum=1.471;DP=804;FS=3.938;HRun=0;HaplotypeScore=152.1878;InbreedingCoeff=0.6776;MQ=63.41;MQ0=9;MQRankSum=-0.609;QD=23.14;ReadPosRankSum=-0.420;VQSLOD=5.4051;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:58:99:0,129,1536	1/1:0,8:9:9.03:147,9,0	0/0:21,0:13:17.98:0,18,189	0/0:26,0:13:20.71:0,21,179	0/0:15,0:18:38.95:0,39,456	0/0:10,0:10:16.75:0,17,187	0/0:33,0:33:70.92:0,71,834	1/1:23,0:23:39.13:558,39,0	0/0:28,0:28:60.07:0,60,686	1/1:9,25:36:44.02:1022,44,0	1/1:11,2:13:20.86:290,21,0	1/1:7,17:25:39.10:560,39,0	0/1:14,26:41:24.62:636,0,25	1/1:9,22:31:42.01:610,42,0	0/0:27,0:26:63.19:0,63,743	0/1:25,13:38:64.03:971,0,64	0/0:37,0:37:55.17:0,55,1051	1/1:11,6:17:44.55:550,45,0	1/1:7,10:17:30.10:429,30,0	1/1:29,10:39:63.12:1021,63,0	0/1:17,25:43:56.74:573,0,57	1/1:14,7:21:44.41:622,44,0	1/1:4,20:23:23.78:384,24,0	1/1:16,27:42:38.13:484,38,0	1/1:18,20:38:37.04:1186,37,0	1/1:9,24:34:7.35:1043,7,0	0/1:23,13:36:55.52:990,0,56	1/1:8,9:17:43.72:560,44,0
chr10	33300115	.	TGC	T	1568.08	PASS	AB=0.972;AC=17;AF=0.304;AN=56;BaseQRankSum=-2.646;DP=825;FS=0.324;HRun=0;HaplotypeScore=193.1816;InbreedingCoeff=-0.4882;MQ=57.88;MQ0=13;MQRankSum=2.754;QD=3.27;ReadPosRankSum=-8.246;VQSLOD=0.0380;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:3.89:0,4,1438	0/0:10,0:10:12.45:0,12,110	0/0:16,0:7:4.35:0,4,103	0/0:28,0:8:0.09:0,0,62	0/0:22,0:22:37.07:0,37,667	0/1:15,0:15:18.82:19,0,311	0/0:35,0:35:59.20:0,59,1120	0/1:7,13:19:99:236,0,123	0/0:31,0:31:38.80:0,39,788	0/1:37,0:37:99:197,0,450	0/1:17,0:16:77.37:77,0,191	0/1:30,0:30:58.06:58,0,176	0/0:35,0:35:21.73:0,22,481	0/1:31,0:31:27.32:27,0,142	0/1:27,0:26:73.76:149,0,74	0/1:36,0:36:99:119,0,651	0/0:41,0:41:11.12:0,11,1199	0/1:18,0:18:97.75:98,0,205	0/1:20,0:19:81.85:165,0,82	0/1:34,1:35:99:164,0,387	0/0:55,0:55:87.20:0,87,818	0/1:21,0:21:79.65:80,0,300	0/1:26,0:25:60.05:60,0,122	0/1:44,0:42:21.67:22,0,226	0/1:37,0:37:13.03:13,0,622	0/1:31,0:31:99:135,0,501	0/1:33,2:35:99:104,0,653	0/0:17,0:17:4.68:0,5,282
chr10	33300117	.	C	CGT	1738.50	PASS	AB=0.964;AC=16;AF=0.308;AN=52;BaseQRankSum=5.775;DP=840;FS=33.145;HRun=0;HaplotypeScore=200.8652;InbreedingCoeff=-0.0679;MQ=57.03;MQ0=13;MQRankSum=-1.776;QD=4.24;ReadPosRankSum=2.028;VQSLOD=1.3117;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:56:87.01:0,87,826	0/1:10,0:10:12.11:12,0,29	./.	./.	0/0:22,0:22:42.12:0,42,479	0/0:17,0:17:29.36:0,29,320	0/0:34,1:36:22.23:0,22,638	0/0:23,0:22:21.89:0,22,216	0/0:28,0:31:56.39:0,56,570	0/1:38,0:38:18.43:18,0,175	0/0:17,0:16:22.36:0,22,204	0/1:20,9:30:27.42:546,0,27	0/1:35,0:36:32.89:33,0,95	1/1:23,10:33:17.90:427,18,0	0/0:7,0:27:44.17:0,44,213	0/0:36,0:37:2.82:0,3,284	0/0:37,0:41:68.89:0,69,768	0/1:16,0:16:8.07:8,0,68	0/1:20,0:18:47.01:50,0,47	0/1:37,0:37:19.70:20,0,168	0/0:54,0:55:29.65:0,30,544	0/0:21,0:21:12.62:0,13,172	1/1:22,5:26:23.35:296,23,0	0/1:34,10:42:7.86:349,0,8	0/1:36,0:37:32.37:32,0,69	0/1:31,0:31:17.37:17,0,82	0/1:34,0:34:84.02:84,0,141	0/1:17,0:17:6.71:7,0,61
chr10	33300694	.	TCACACA	T	587.81	PASS	AB=0.753;AC=14;AF=0.269;AN=52;BaseQRankSum=3.433;DP=621;FS=1.138;HRun=0;HaplotypeScore=129.9648;InbreedingCoeff=0.4338;MQ=63.22;MQ0=23;MQRankSum=-1.499;QD=2.95;ReadPosRankSum=0.868;VQSLOD=2.6119;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:22,7:29:0:0,0,0	0/0:10,0:10:3.01:0,3,48	./.	./.	0/0:13,0:20:11.80:0,12,145	0/1:12,0:21:4.27:4,0,32	0/0:20,0:24:1.69:0,2,44	0/0:29,0:27:3:0,3,25	0/1:12,3:16:30.49:56,0,30	0/0:24,0:24:36.11:0,36,660	0/0:12,0:10:6.01:0,6,121	1/1:12,3:16:9.03:144,9,0	0/0:12,0:17:12.04:0,12,264	1/1:14,4:19:12.04:222,12,0	1/1:13,0:34:12.04:166,12,0	0/0:25,0:25:25.44:0,25,449	1/1:13,0:17:7.44:48,7,0	0/0:14,0:13:12.04:0,12,217	0/0:12,0:12:3.01:0,3,60	0/0:11,0:9:6.02:0,6,113	0/0:25,0:25:12.04:0,12,268	0/0:26,0:25:18.06:0,18,364	1/1:7,3:11:3.01:42,3,0	0/1:21,12:32:38.48:58,0,38	0/0:25,0:23:6.02:0,6,116	0/0:28,0:27:25.64:0,26,418	0/0:8,0:15:14.98:0,15,291	0/0:10,0:8:12.04:0,12,230
chr10	33307025	.	C	CA	5815.93	PASS	AB=0.642;AC=42;AF=0.750;AN=56;BaseQRankSum=-2.520;DP=559;FS=0.000;HRun=13;HaplotypeScore=98.5107;InbreedingCoeff=0.0462;MQ=69.79;MQ0=0;MQRankSum=-2.592;QD=11.02;ReadPosRankSum=1.986;VQSLOD=4.5172;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,11:16:27.18:235,27,0	1/1:1,6:7:15.02:139,15,0	0/0:13,0:16:9.98:0,10,79	0/0:15,0:13:2.39:0,2,65	0/1:21,3:25:29.24:29,0,222	0/1:4,15:19:8.09:218,0,8	0/1:9,7:17:9.10:209,0,9	1/1:16,15:33:20.56:349,21,0	0/1:5,10:15:20.12:115,0,20	1/1:11,24:36:56.09:521,56,0	0/1:7,15:26:11.23:282,0,11	1/1:11,1:20:25.75:134,26,0	0/1:5,13:18:1.22:123,0,1	1/1:12,0:12:28.73:168,29,0	0/1:11,10:21:28.72:190,0,29	0/1:6,12:18:5.57:97,0,6	1/1:3,17:20:27.03:251,27,0	1/1:6,2:8:11.97:103,12,0	1/1:11,13:23:15.47:274,15,0	1/1:9,25:36:72.46:595,72,0	1/1:2,10:13:30.34:266,30,0	1/1:6,13:20:30.51:295,31,0	1/1:13,1:22:17.82:98,18,0	1/1:6,0:14:14.20:72,14,0	0/1:9,10:19:7.80:214,0,8	1/1:7,16:25:17.23:291,17,0	1/1:11,26:40:56.23:525,56,0	0/1:0,3:4:0.83:23,0,1
chr10	33308573	.	AC	A	574.47	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.232;DP=616;FS=1.932;HRun=3;HaplotypeScore=58.4116;InbreedingCoeff=0.9833;MQ=86.61;MQ0=0;MQRankSum=-0.645;QD=23.94;ReadPosRankSum=1.433;VQSLOD=3.1929;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:72.20:0,72,990	0/0:9,0:9:27.08:0,27,370	0/0:17,0:17:42.04:0,42,572	0/0:24,0:25:57.71:0,58,888	0/0:24,0:24:69.21:0,69,948	0/0:24,0:24:69.22:0,69,976	0/0:20,0:20:60.19:0,60,846	0/0:20,0:20:60.18:0,60,828	0/0:15,0:15:45.08:0,45,604	0/0:31,0:31:87.28:0,87,1223	0/0:25,0:25:72.22:0,72,998	0/0:21,0:21:60.19:0,60,847	0/0:31,0:31:93.31:0,93,1336	0/0:19,0:19:54.02:0,54,673	1/1:0,24:24:54.17:669,54,0	0/0:20,0:19:60.19:0,60,845	0/0:19,0:19:54.18:0,54,777	0/0:5,0:5:15.02:0,15,194	0/0:26,0:26:72.24:0,72,1035	0/0:28,0:28:81.26:0,81,1146	0/0:18,0:18:51.16:0,51,716	0/0:22,0:22:63.17:0,63,842	0/0:26,0:26:72.24:0,72,1032	0/0:23,0:23:69.23:0,69,992	0/0:29,0:29:87.27:0,87,1218	0/0:28,0:28:78.25:0,78,1105	0/0:27,0:27:78.25:0,78,1103	0/0:14,0:14:42.10:0,42,580
chr10	33311584	.	TGGG	T	10313.82	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-17.141;DP=601;FS=1.576;HRun=10;HaplotypeScore=140.0123;InbreedingCoeff=0.9677;MQ=80.06;MQ0=1;MQRankSum=-2.894;QD=32.23;ReadPosRankSum=0.325;VQSLOD=3.2141;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:1,0:45:48.59:0,49,109	1/1:1,9:10:24.08:328,24,0	0/0:19,0:19:39.40:0,39,660	0/0:25,0:22:41.85:0,42,626	0/0:2,0:23:22.43:0,22,50	0/0:3,0:17:16.20:0,16,36	0/0:1,0:22:22.43:0,22,50	1/1:6,25:31:75.22:1023,75,0	0/0:1,0:16:21.69:0,22,67	1/1:2,22:24:66.21:893,66,0	1/1:4,14:18:33.10:450,33,0	0/0:1,0:17:18.69:0,19,42	1/1:4,14:18:36.11:491,36,0	0/0:2,0:14:2.90:0,3,13	0/0:0,0:22:25.39:0,25,57	1/1:2,32:34:87.28:1187,87,0	0/0:0,0:28:32.03:0,32,72	1/1:0,12:12:33.10:450,33,0	1/1:1,17:18:51.17:694,51,0	1/1:2,25:27:51.12:696,51,0	1/1:5,25:30:57.17:768,57,0	1/1:1,13:14:27.08:368,27,0	0/0:1,0:16:17.91:0,18,40	0/0:2,0:15:16.20:0,16,36	1/1:3,20:23:51.16:696,51,0	1/1:2,24:26:72.21:960,72,0	1/1:0,29:29:78.26:1064,78,0	1/1:0,6:6:18.06:246,18,0
chr10	33315459	.	T	TA	11192.10	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-15.174;DP=553;FS=0.333;HRun=6;HaplotypeScore=47.3264;InbreedingCoeff=0.9974;MQ=79.70;MQ0=0;MQRankSum=-1.997;QD=33.21;ReadPosRankSum=1.734;VQSLOD=4.7403;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:33.07:0,33,337	1/1:0,6:6:18.06:226,18,0	0/0:18,0:18:45.08:0,45,450	0/0:8,0:8:24.04:0,24,240	0/0:36,0:36:99:0,99,1003	0/0:21,0:21:60.14:0,60,612	0/0:8,0:8:21.05:0,21,214	1/1:4,36:39:99:1356,108,0	0/0:15,0:15:45.10:0,45,459	1/1:0,21:21:63.18:777,63,0	1/1:4,21:25:60.19:755,60,0	0/0:13,0:13:39.09:0,39,398	1/1:2,18:20:57.14:698,57,0	0/0:22,0:22:57.13:0,57,582	0/0:14,0:14:39.09:0,39,397	1/1:1,21:22:57.18:717,57,0	0/0:12,0:12:29.99:0,30,285	1/1:1,19:20:45.12:566,45,0	1/1:3,22:25:66.21:830,66,0	1/1:1,31:32:87.25:1078,87,0	1/1:2,25:27:72.23:906,72,0	1/1:2,16:18:48.15:604,48,0	0/0:22,0:22:63.14:0,63,643	0/0:14,0:14:39.09:0,39,398	1/1:2,19:21:54.17:679,54,0	1/1:1,23:24:66.21:830,66,0	1/1:3,24:27:72.23:906,72,0	1/1:2,7:9:21.07:264,21,0
chr10	33316917	.	GA	G	517.33	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.787;DP=631;FS=0.000;HRun=7;HaplotypeScore=84.6702;InbreedingCoeff=0.9821;MQ=71.70;MQ0=0;MQRankSum=-2.359;QD=25.87;ReadPosRankSum=-1.799;VQSLOD=3.2689;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:90.27:0,90,1116	0/0:7,0:7:15.05:0,15,189	0/0:21,0:21:44.35:0,44,524	0/0:10,0:10:26.55:0,27,310	0/0:28,0:28:78.23:0,78,956	0/0:21,0:21:57.17:0,57,704	0/0:20,0:20:48.15:0,48,604	0/0:42,0:42:99:0,114,1434	0/0:17,0:17:50.51:0,51,599	0/0:36,0:36:99:0,99,1236	0/0:18,0:18:51.16:0,51,641	0/0:22,0:22:54.17:0,54,679	0/0:30,0:30:84.26:0,84,1045	0/0:22,0:22:66.21:0,66,830	1/1:0,20:20:60.14:612,60,0	0/0:9,0:9:27.09:0,27,340	0/0:22,0:22:60.19:0,60,755	0/0:14,0:14:36.12:0,36,453	0/0:19,0:18:51.14:0,51,610	0/0:35,0:35:93.26:0,93,1136	0/0:13,0:13:39.11:0,39,477	0/0:18,0:18:48.14:0,48,592	0/0:32,0:32:90.22:0,90,1087	0/0:15,0:15:39.12:0,39,491	0/0:35,0:35:99:0,99,1245	0/0:25,0:25:69.21:0,69,857	0/0:27,0:26:72.21:0,72,891	0/0:19,0:19:54.17:0,54,679
chr10	33317058	.	GTT	G	7541.94	PASS	AB=0.577;AC=51;AF=0.911;AN=56;BaseQRankSum=-3.737;DP=511;FS=4.866;HRun=14;HaplotypeScore=81.0334;InbreedingCoeff=0.6126;MQ=71.24;MQ0=1;MQRankSum=-1.164;QD=15.65;ReadPosRankSum=1.620;VQSLOD=4.2277;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,0:24:51.05:217,51,0	1/1:1,4:5:8.98:83,9,0	0/0:12,0:7:8.99:0,9,79	0/0:14,0:11:9.31:0,9,80	1/1:6,17:25:32.63:344,33,0	1/1:8,13:21:8.01:253,8,0	1/1:4,10:14:23.98:222,24,0	1/1:8,29:37:80.96:745,81,0	1/1:5,18:23:6.69:375,7,0	1/1:2,18:21:56.74:504,57,0	1/1:1,19:20:41.41:387,41,0	1/1:1,0:13:27.44:119,27,0	1/1:6,19:26:41.86:436,42,0	1/1:3,0:22:46.64:201,47,0	1/1:6,18:24:48:444,48,0	1/1:2,10:12:10.09:203,10,0	1/1:4,8:12:20.94:194,21,0	1/1:5,5:10:6.72:128,7,0	1/1:5,16:22:50.72:448,51,0	1/1:2,17:21:35.62:380,36,0	1/1:4,12:16:32.95:305,33,0	0/1:4,10:15:7.72:167,0,8	1/1:2,0:21:39.26:168,39,0	1/1:3,0:17:35.65:154,36,0	1/1:6,11:17:23.93:222,24,0	1/1:7,5:12:17.88:166,18,0	1/1:4,23:27:66.01:611,66,0	1/1:1,2:4:8.73:67,9,0
chr10	33318218	.	G	GA	454.30	PASS	AB=0.933;AC=3;AF=0.054;AN=56;BaseQRankSum=-0.153;DP=339;FS=0.000;HRun=7;HaplotypeScore=67.8684;InbreedingCoeff=0.5468;MQ=62.71;MQ0=6;MQRankSum=0.565;QD=14.65;ReadPosRankSum=1.088;VQSLOD=3.2480;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,16:17:45.14:544,45,0	0/0:6,0:6:9.01:0,9,87	0/0:12,0:7:21.03:0,21,203	0/0:5,0:4:8.99:0,9,86	0/0:17,0:17:45.06:0,45,434	0/0:15,0:15:33.05:0,33,319	0/1:13,1:14:15.21:15,0,152	0/0:21,0:21:48.07:0,48,463	0/0:22,0:22:54.08:0,54,521	0/0:11,0:11:30.04:0,30,286	0/0:16,0:16:39.05:0,39,371	0/0:9,0:9:21.03:0,21,203	0/0:7,0:7:15.02:0,15,145	0/0:16,0:16:45.07:0,45,434	0/0:7,0:7:14.72:0,15,169	0/0:8,0:8:24.04:0,24,232	0/0:15,0:14:33.04:0,33,319	0/0:7,0:7:9.01:0,9,87	0/0:5,0:5:15.02:0,15,145	0/0:27,0:27:81.12:0,81,776	0/0:11,0:11:24.03:0,24,231	0/0:5,0:5:15.02:0,15,145	0/0:13,0:13:33.05:0,33,319	0/0:11,0:11:33.04:0,33,312	0/0:9,0:8:24.04:0,24,232	0/0:13,0:12:27.04:0,27,261	0/0:11,0:11:33.05:0,33,318	0/0:9,0:8:18.01:0,18,174
chr10	33318280	.	CA	C	5799.67	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=1.630;DP=430;FS=17.585;HRun=7;HaplotypeScore=66.3674;InbreedingCoeff=0.9786;MQ=76.55;MQ0=0;MQRankSum=-0.412;QD=26.98;ReadPosRankSum=2.771;VQSLOD=3.6243;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:54.17:0,54,679	1/1:2,3:5:6.01:61,6,0	0/0:10,0:10:21.06:0,21,249	0/0:12,0:11:18.04:0,18,202	0/0:32,0:32:78.21:0,78,962	0/0:20,0:20:51.11:0,51,611	0/0:15,0:15:36.11:0,36,450	1/1:2,26:28:75.14:756,75,0	0/0:24,0:24:63.18:0,63,767	1/1:1,11:12:33.08:337,33,0	1/1:3,18:21:54.12:551,54,0	0/0:11,0:11:30.05:0,30,359	1/1:0,9:9:24.05:245,24,0	0/0:13,0:13:36.12:0,36,453	0/0:10,0:10:24.08:0,24,302	1/1:0,5:5:12.03:122,12,0	0/0:21,0:21:60.15:0,60,723	1/1:1,13:14:36.08:367,36,0	1/1:0,10:10:30.07:306,30,0	1/1:3,23:26:63.14:643,63,0	1/1:0,16:16:45.10:459,45,0	1/1:0,8:8:24.05:245,24,0	0/0:14,0:14:39.12:0,39,489	0/0:11,0:11:33.11:0,33,415	1/1:1,13:14:39.09:398,39,0	1/1:0,19:19:54.11:544,54,0	1/1:3,13:16:39.09:398,39,0	1/1:0,12:12:36.08:367,36,0
chr10	33318660	.	ATT	A	11230.99	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-1.133;DP=633;FS=2.297;HRun=10;HaplotypeScore=106.0398;InbreedingCoeff=0.9923;MQ=74.59;MQ0=0;MQRankSum=-2.574;QD=28.51;ReadPosRankSum=1.943;VQSLOD=5.0280;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,28:30:75.20:836,75,0	1/1:0,8:8:24.06:266,24,0	0/0:15,0:16:29.41:0,29,324	0/0:13,0:11:15.04:0,15,201	0/0:32,0:31:69.23:0,69,1081	0/0:29,0:30:86.73:0,87,1271	0/0:13,0:13:36.10:0,36,529	1/1:4,33:37:99:1074,99,0	0/0:21,0:23:62.67:0,63,896	1/1:4,30:34:90.24:1003,90,0	1/1:1,25:26:66.16:733,66,0	0/0:3,1:22:12.49:0,12,131	1/1:1,16:17:36.10:401,36,0	0/0:0,0:28:64.88:0,65,223	1/1:3,22:25:57.15:635,57,0	1/1:1,23:24:62.66:677,63,0	0/0:32,0:32:90.25:0,90,1377	1/1:5,12:17:33.08:368,33,0	1/1:2,15:17:45.12:502,45,0	1/1:3,23:26:66.16:734,66,0	1/1:2,15:17:45.11:502,45,0	1/1:1,19:20:57.15:635,57,0	0/0:5,0:18:27.45:0,27,94	0/0:0,0:12:24.95:0,25,86	1/1:3,25:28:72.19:803,72,0	1/1:2,29:31:87.21:958,87,0	1/1:3,26:29:78.20:869,78,0	1/1:1,7:8:21.06:234,21,0
chr10	33319089	.	CT	C	7369.81	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=8.590;DP=653;FS=10.628;HRun=8;HaplotypeScore=74.2909;InbreedingCoeff=0.9951;MQ=73.48;MQ0=2;MQRankSum=-1.067;QD=23.85;ReadPosRankSum=-2.088;VQSLOD=4.1499;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:3,0:43:99:0,99,532	1/1:0,4:4:12.02:116,12,0	0/0:31,0:21:37.05:0,37,344	0/0:24,0:17:22.88:0,23,271	0/0:25,0:25:63.18:0,63,742	0/0:26,0:26:75.23:0,75,904	0/0:25,0:25:69.21:0,69,832	1/1:2,30:32:87.07:817,87,0	0/0:14,0:14:42.13:0,42,503	1/1:3,15:18:45.07:431,45,0	1/1:1,18:19:54.09:521,54,0	0/0:21,0:21:60.16:0,60,700	1/1:1,9:10:24.03:232,24,0	0/0:18,0:18:51.14:0,51,604	0/0:21,0:21:57.17:0,57,688	1/1:3,15:18:42.06:405,42,0	0/0:46,0:46:99:0,132,1567	1/1:2,18:20:51.08:492,51,0	1/1:7,30:37:81.10:774,81,0	1/1:1,18:19:54.03:512,54,0	1/1:3,16:19:42.06:406,42,0	1/1:3,14:17:36.05:348,36,0	0/0:21,0:21:60.17:0,60,712	0/0:29,0:29:78.24:0,78,942	1/1:2,22:24:60.09:579,60,0	1/1:3,24:27:72.11:695,72,0	1/1:2,26:28:66.10:637,66,0	1/1:3,14:17:42.07:406,42,0
chr10	33320241	.	T	TAAAG	28484.01	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=-11.330;DP=631;FS=9.123;HRun=0;HaplotypeScore=91.0550;InbreedingCoeff=0.9938;MQ=90.44;MQ0=5;MQRankSum=-9.269;QD=62.19;ReadPosRankSum=4.289;VQSLOD=6.3781;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,20:22:49.49:1310,49,0	1/1:0,4:4:12.04:335,12,0	0/0:30,0:30:68.90:0,69,1339	0/0:26,0:26:78.25:0,78,1455	0/0:21,0:21:60.16:0,60,1086	0/0:38,0:38:99:0,108,1960	0/0:13,0:13:39.10:0,39,708	1/1:4,29:36:99:2527,105,0	0/0:22,0:22:66.21:0,66,1227	1/1:1,25:28:81.26:2077,81,0	1/1:0,19:19:48.04:1145,48,0	1/1:4,16:20:60.12:1516,60,0	1/1:0,22:24:54.19:1508,54,0	1/1:1,26:28:57.15:1529,57,0	1/1:0,0:36:78.20:1601,78,0	1/1:0,17:18:51.13:1362,51,0	0/0:23,0:23:63.18:0,63,1151	1/1:0,13:13:30.05:774,30,0	1/1:1,18:19:54.16:1360,54,0	1/1:1,18:19:51:1168,51,0	1/1:1,22:23:47.97:1084,48,0	1/1:1,15:18:44.93:900,45,0	1/1:0,20:20:50.91:1356,51,0	1/1:0,17:17:30.57:840,31,0	1/1:0,18:18:51.09:1297,51,0	1/1:2,29:32:87.29:2345,87,0	1/1:2,26:27:75.05:1777,75,0	1/1:0,9:10:24.08:671,24,0
chr10	33320534	.	CA	C	918.83	PASS	AB=0.907;AC=6;AF=0.107;AN=56;BaseQRankSum=6.652;DP=518;FS=7.679;HRun=10;HaplotypeScore=50.6112;InbreedingCoeff=0.6579;MQ=73.66;MQ0=0;MQRankSum=0.486;QD=11.63;ReadPosRankSum=1.314;VQSLOD=2.3815;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,29:32:74.98:651,75,0	0/0:10,0:10:24.06:0,24,265	0/1:8,1:9:7.06:7,0,45	0/0:12,0:12:29.40:0,29,242	0/0:27,1:28:52.15:0,52,796	0/0:25,1:26:49.11:0,49,746	0/0:15,0:15:36.08:0,36,388	0/0:25,0:25:60.16:0,60,664	0/0:13,0:13:36.09:0,36,391	0/0:23,0:24:60:0,60,645	0/0:19,0:21:47.80:0,48,493	0/0:15,0:15:42.10:0,42,456	0/0:12,1:13:7.04:0,7,306	0/0:16,0:16:45.10:0,45,487	1/1:1,17:18:17.81:384,18,0	0/0:9,0:9:27.06:0,27,291	0/1:17,2:19:3.99:4,0,408	0/0:17,0:17:42.06:0,42,435	0/0:25,0:25:63.17:0,63,694	0/0:23,0:23:57.15:0,57,622	0/0:7,0:7:18.05:0,18,199	0/0:18,0:18:51.14:0,51,564	0/0:26,0:27:62.19:0,62,711	0/0:10,0:10:27.07:0,27,299	0/0:14,0:16:32.92:0,33,346	0/0:20,0:21:47.96:0,48,512	0/0:34,0:33:83.98:0,84,872	0/0:13,0:13:30.08:0,30,332
chr10	33321493	.	TG	T	1051.27	PASS	AB=0.729;AC=18;AF=0.346;AN=52;BaseQRankSum=9.361;DP=556;FS=3.546;HRun=2;HaplotypeScore=91.9965;InbreedingCoeff=0.2376;MQ=41.45;MQ0=89;MQRankSum=-8.001;QD=5.10;ReadPosRankSum=-0.326;VQSLOD=0.5056;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:32:65.16:0,65,795	1/1:3,1:2:2.98:22,3,0	0/0:50,0:8:13.03:0,13,195	0/0:56,1:11:24.03:0,24,295	0/0:17,0:15:31.65:0,32,400	0/0:12,1:13:27.06:0,27,358	0/0:29,0:21:49.26:0,49,627	0/1:7,8:14:99:129,0,146	0/0:18,0:16:32.43:0,32,391	0/1:10,16:23:99:295,0,108	0/0:3,5:6:0.47:0,0,1	0/0:11,0:10:12.77:0,13,39	1/1:3,13:12:20.65:136,21,0	0/1:19,0:16:4.50:4,0,52	1/1:18,0:9:0.44:14,0,0	0/1:5,11:14:5.62:75,0,6	0/0:27,2:25:19.07:0,19,644	1/1:11,6:9:20.46:175,20,0	0/1:12,3:10:73.77:74,0,104	./.	0/1:17,10:22:17.18:17,0,34	./.	0/0:17,0:14:13.23:0,13,33	0/0:25,1:20:18.45:0,18,61	0/0:3,8:8:0.47:0,0,1	0/1:8,9:14:88.61:159,0,89	1/1:4,9:8:11.90:85,12,0	0/1:1,1:3:24.15:29,0,24
chr10	33321494	.	GGTGTGT	G	4064.26	PASS	AB=1.000;AC=21;AF=0.404;AN=52;BaseQRankSum=1.669;DP=559;FS=14.539;HRun=0;HaplotypeScore=107.3114;InbreedingCoeff=0.4379;MQ=41.60;MQ0=86;MQRankSum=-9.112;QD=16.66;ReadPosRankSum=-3.355;VQSLOD=1.4050;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:32:72.24:0,72,1711	1/1:4,0:2:3.01:65,3,0	0/1:51,0:8:23.59:24,0,342	0/0:58,0:12:26.88:0,27,578	0/0:17,0:15:33.11:0,33,821	0/0:13,0:13:27.56:0,28,707	0/0:30,0:22:53.88:0,54,1302	1/1:16,0:15:27.09:566,27,0	0/0:16,0:15:30.10:0,30,769	0/1:26,0:23:24.58:939,0,25	0/1:8,0:6:0.29:0,0,0	0/0:11,0:10:20.96:0,21,266	1/1:16,0:12:27.01:480,27,0	0/0:15,0:15:33.03:0,33,369	0/0:9,0:9:3.30:0,3,144	1/1:16,0:15:9.15:290,9,0	0/0:27,0:24:58.44:0,58,1406	0/1:15,0:10:3.46:356,0,3	0/1:16,0:12:55.98:241,0,56	./.	0/1:22,0:23:57.87:58,0,71	./.	0/0:16,0:14:26.32:0,26,336	0/0:24,0:20:33.10:0,33,430	1/1:11,0:8:5.65:40,6,0	1/1:18,0:15:29.11:628,29,0	1/1:12,0:8:20.94:319,21,0	0/1:3,0:3:55.67:57,0,56
chr10	33321869	.	AG	A	917.88	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.576;DP=666;FS=3.819;HRun=2;HaplotypeScore=67.3489;InbreedingCoeff=0.9941;MQ=70.22;MQ0=0;MQRankSum=-0.304;QD=28.68;ReadPosRankSum=3.514;VQSLOD=3.3107;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,132,1895	0/0:7,0:7:21.07:0,21,314	0/0:35,0:33:96.31:0,96,1376	0/0:37,0:36:96.80:0,97,1395	0/0:18,0:18:54.18:0,54,807	0/0:18,0:18:51.16:0,51,744	0/0:27,0:27:75.22:0,75,1082	0/0:26,0:26:69.23:0,69,1016	0/0:15,0:15:45.15:0,45,674	0/0:23,0:22:66.21:0,66,954	0/0:12,0:12:33.11:0,33,490	0/0:27,0:27:81.26:0,81,1194	0/0:20,0:20:57.19:0,57,853	0/0:33,0:33:99:0,99,1465	1/1:1,31:32:78.25:1013,78,0	0/0:25,0:25:74.04:0,74,1063	0/0:38,0:38:99:0,114,1686	0/0:16,0:16:48.16:0,48,715	0/0:22,0:22:66.22:0,66,989	0/0:13,0:13:39.11:0,39,558	0/0:39,0:39:99:0,111,1663	0/0:19,0:19:51.17:0,51,764	0/0:14,0:14:42.12:0,42,590	0/0:33,0:33:93.31:0,93,1394	0/0:10,0:10:30.10:0,30,448	0/0:30,0:30:90.30:0,90,1330	0/0:23,0:23:69.23:0,69,1034	0/0:10,0:10:27.05:0,27,379
chr10	33322058	.	TTGG	T	3873.83	PASS	AB=0.841;AC=28;AF=0.500;AN=56;BaseQRankSum=-9.938;DP=587;FS=13.029;HRun=0;HaplotypeScore=113.4618;InbreedingCoeff=0.6182;MQ=57.48;MQ0=16;MQRankSum=3.439;QD=12.74;ReadPosRankSum=-0.443;VQSLOD=2.7016;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:33.05:0,33,510	1/1:2,3:5:11.95:141,12,0	0/0:30,0:14:9:0,9,79	0/0:35,0:18:10.79:0,11,97	0/0:16,0:16:14.86:0,15,140	0/0:17,0:17:12.01:0,12,152	0/0:14,0:12:11.83:0,12,90	0/1:23,0:21:7.03:106,0,7	0/0:14,0:14:26.98:0,27,287	1/1:9,8:17:27.07:355,27,0	1/1:13,9:22:23.90:238,24,0	0/0:25,0:25:0.47:0,0,417	1/1:6,8:15:14.98:185,15,0	0/0:27,0:27:12.39:0,12,498	0/0:1,0:30:12.04:0,12,152	0/1:6,12:19:64.79:303,0,65	0/0:3,0:16:4.25:0,4,36	1/1:8,2:10:14.95:150,15,0	1/1:9,9:17:27.04:337,27,0	1/1:8,5:13:17.96:187,18,0	0/1:18,9:23:8.93:151,0,9	1/1:13,14:27:38.25:398,38,0	0/1:33,0:33:27.29:27,0,297	0/0:27,0:27:11.70:0,12,553	1/1:7,13:20:24.08:326,24,0	1/1:14,11:25:33.06:394,33,0	1/1:5,18:23:36.12:493,36,0	1/1:3,4:7:6.02:83,6,0
chr10	33322705	.	A	AGTCT	7062.67	PASS	AB=1.000;AC=38;AF=0.704;AN=54;BaseQRankSum=4.487;DP=583;FS=8.593;HRun=0;HaplotypeScore=156.5701;InbreedingCoeff=0.6292;MQ=72.30;MQ0=5;MQRankSum=-2.589;QD=17.23;ReadPosRankSum=-0.037;VQSLOD=3.7804;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:33,0:33:12.59:166,13,0	1/1:7,0:7:6.02:88,6,0	0/0:26,0:17:9.03:0,9,143	0/0:30,0:27:18.06:0,18,263	0/1:17,0:17:0:0,0,0	0/0:38,0:38:15.05:0,15,226	0/0:30,0:30:27.06:0,27,383	0/1:37,0:37:8.40:947,0,8	0/0:26,0:26:18.01:0,18,252	1/1:14,0:13:12.03:221,12,0	1/1:10,0:10:3.01:72,3,0	1/1:21,0:21:18.06:334,18,0	1/1:18,0:18:27.02:433,27,0	1/1:21,2:23:27.08:562,27,0	0/1:25,0:25:3.49:27,0,3	1/1:13,0:13:15.05:322,15,0	0/0:15,0:15:6.02:0,6,97	1/1:12,2:13:24.07:452,24,0	1/1:28,0:28:42.08:742,42,0	1/1:20,0:20:8.99:107,9,0	1/1:21,3:23:12.03:239,12,0	./.	1/1:13,1:14:11.98:152,12,0	1/1:22,1:23:39.09:694,39,0	1/1:13,1:14:15.05:260,15,0	1/1:14,0:12:21.06:397,21,0	0/1:29,0:29:9.19:639,0,9	1/1:10,1:11:12.04:211,12,0
chr10	33322730	.	GTC	G	2052.82	PASS	AB=0.850;AC=23;AF=0.426;AN=54;BaseQRankSum=0.423;DP=527;FS=0.000;HRun=0;HaplotypeScore=159.9899;InbreedingCoeff=-0.5069;MQ=49.13;MQ0=11;MQRankSum=2.414;QD=4.96;ReadPosRankSum=1.825;VQSLOD=3.1514;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:26,5:30:99:147,0,158	0/1:5,0:5:14.95:15,0,82	0/0:12,0:4:9.03:0,9,165	0/0:12,0:10:18.06:0,18,287	./.	0/0:24,0:24:5.33:0,5,246	0/0:29,0:29:27.07:0,27,424	0/1:44,1:41:91.98:92,0,856	0/0:17,0:17:18.01:0,18,263	0/1:10,2:11:70.96:71,0,177	1/1:5,2:7:2.99:23,3,0	0/1:17,6:23:99:128,0,364	0/1:20,3:23:99:103,0,605	0/1:16,9:25:99:183,0,110	1/1:14,8:22:11.74:171,12,0	0/1:12,5:17:69.54:70,0,251	0/1:16,0:16:19.52:20,0,98	0/1:10,3:12:99:164,0,211	0/1:16,7:22:99:210,0,226	0/1:15,3:18:36.58:37,0,248	0/1:25,3:25:57.81:58,0,296	0/0:4,2:6:6.02:0,6,84	0/1:15,2:16:42.11:42,0,171	0/1:13,7:20:99:190,0,183	0/1:10,3:13:97.76:98,0,138	0/1:14,6:17:99:154,0,325	0/1:20,6:27:99:134,0,506	0/1:8,1:9:99:102,0,100
chr10	33322732	.	C	CTG	1392.14	PASS	AB=0.992;AC=24;AF=0.429;AN=56;BaseQRankSum=3.354;DP=523;FS=1.480;HRun=0;HaplotypeScore=164.7998;InbreedingCoeff=-0.4961;MQ=48.93;MQ0=12;MQRankSum=2.874;QD=3.28;ReadPosRankSum=1.013;VQSLOD=2.3766;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:25,6:30:99:143,0,110	0/1:5,0:5:15.06:15,0,82	0/0:10,0:3:9.03:0,9,137	0/0:12,0:10:18.06:0,18,252	0/1:13,0:13:0:0,0,0	0/0:23,0:23:5.33:0,5,215	0/0:29,0:29:27.06:0,27,369	0/1:44,0:40:99:115,0,1040	0/0:17,0:17:18.01:0,18,243	0/1:12,0:10:41.32:41,0,192	1/1:7,0:7:2.92:17,3,0	0/1:23,0:23:82.56:83,0,366	0/1:22,0:22:88.23:88,0,527	0/1:22,0:22:95.68:143,0,96	1/1:22,0:22:3.88:82,4,0	0/1:17,0:17:33.40:33,0,248	0/1:17,0:17:19.52:20,0,80	0/1:13,0:12:79.20:79,0,179	0/1:21,0:20:99:164,0,224	0/1:19,0:19:37.26:37,0,247	0/1:29,0:26:41.12:41,0,287	0/0:7,0:7:6.02:0,6,84	0/1:17,0:16:36.15:36,0,151	0/1:20,0:20:99:153,0,115	0/1:13,0:13:88.82:89,0,138	0/1:21,0:18:30.83:31,0,334	0/1:27,0:27:56.96:57,0,433	0/1:9,0:9:79.73:80,0,98
chr10	33322752	.	GTCTCTGTCTC	G	506.96	PASS	AB=1.000;AC=9;AF=0.167;AN=54;BaseQRankSum=-3.235;DP=559;FS=2.698;HRun=0;HaplotypeScore=215.6756;InbreedingCoeff=0.3199;MQ=55.40;MQ0=17;MQRankSum=-2.479;QD=3.50;ReadPosRankSum=-3.415;VQSLOD=2.3516;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:18.45:0,18,389	0/0:4,0:4:10.21:0,10,196	0/0:12,0:4:3.63:0,4,173	0/0:33,0:15:1.97:0,2,203	0/0:0,18:18:0.26:0,0,1	1/1:1,22:23:6.02:190,6,0	./.	0/1:34,0:30:55.85:56,0,275	1/1:1,19:19:6.02:179,6,0	0/0:14,0:12:0.93:0,1,458	0/0:11,0:11:15.01:0,15,174	0/0:25,0:25:41.81:0,42,895	0/0:24,0:24:49.05:0,49,1414	0/1:26,0:26:9.59:10,0,437	0/0:20,0:20:13.21:0,13,93	0/0:22,0:22:20.38:0,20,679	1/1:2,14:15:6.02:193,6,0	0/0:15,0:16:7.85:0,8,549	0/0:19,0:17:2.62:0,3,432	0/0:18,0:18:29.80:0,30,587	0/0:30,0:27:29.95:0,30,724	0/0:9,0:9:9.92:0,10,189	0/0:20,0:18:13.58:0,14,449	0/0:17,0:17:1.30:0,1,413	0/0:13,0:13:23.86:0,24,377	0/1:26,0:23:10.33:10,0,648	0/0:26,0:26:52.71:0,53,1189	0/0:8,0:8:11.62:0,12,330
chr10	33322760	.	C	CTG	9902.90	PASS	AB=0.758;AC=39;AF=0.722;AN=54;BaseQRankSum=-5.466;DP=620;FS=0.000;HRun=0;HaplotypeScore=145.5476;InbreedingCoeff=0.4054;MQ=62.56;MQ0=16;MQRankSum=-0.137;QD=19.49;ReadPosRankSum=4.971;VQSLOD=4.5894;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:13,19:32:2.18:218,2,0	0/1:1,4:5:5.49:137,0,5	0/0:32,0:11:15.62:0,16,189	0/1:50,0:24:7.81:8,0,315	0/1:18,0:18:0:0,0,0	0/0:22,0:22:5.78:0,6,31	./.	1/1:9,24:30:43.10:800,43,0	0/1:20,0:19:0.09:0,0,10	1/1:2,13:14:31.82:554,32,0	1/1:3,11:14:14.97:286,15,0	1/1:7,18:25:27.75:676,28,0	1/1:2,22:24:48.16:917,48,0	0/1:8,16:24:18.92:370,0,19	0/0:21,0:21:8.39:0,8,86	1/1:4,20:25:35.55:645,36,0	0/0:15,0:14:3.68:0,4,15	0/1:7,10:17:20.08:305,0,20	1/1:8,13:19:31.72:579,32,0	1/1:3,14:17:30.10:574,30,0	1/1:8,25:31:30.10:575,30,0	1/1:2,10:12:12.04:229,12,0	1/1:1,24:24:27.09:514,27,0	1/1:6,13:19:9.96:281,10,0	0/1:3,11:14:0.26:320,0,0	1/1:6,19:23:40.93:844,41,0	1/1:7,22:29:33.64:850,34,0	1/1:2,7:9:4.39:221,4,0
chr10	33324115	.	G	GTCAC	388.02	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-0.580;DP=422;FS=0.000;HRun=0;HaplotypeScore=126.5056;InbreedingCoeff=0.8511;MQ=64.80;MQ0=1;MQRankSum=-3.914;QD=32.33;ReadPosRankSum=0.829;VQSLOD=3.7407;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,10:12:18.06:478,18,0	0/0:7,0:7:21.07:0,21,390	0/0:6,0:6:12.04:0,12,216	0/0:5,0:5:5.91:0,6,72	0/0:12,0:12:33.10:0,33,585	0/0:19,0:18:48.15:0,48,865	0/0:14,0:13:36.12:0,36,672	0/0:27,0:25:60.21:0,60,1120	0/0:15,0:15:42.06:0,42,712	0/0:12,0:12:33.10:0,33,575	0/0:19,0:19:45.15:0,45,845	0/0:13,0:13:36.12:0,36,671	0/0:14,0:14:33.05:0,33,546	0/0:11,0:11:33.11:0,33,616	0/0:14,0:13:30.10:0,30,560	0/0:29,0:29:75.21:0,75,1346	0/0:10,0:10:27.09:0,27,507	0/0:10,0:10:27.09:0,27,504	0/0:16,0:16:45.15:0,45,802	0/0:29,0:29:81.28:0,81,1510	0/0:14,0:14:36.12:0,36,649	0/0:11,0:11:27.09:0,27,504	0/0:16,0:16:45.15:0,45,840	0/0:12,0:12:36.12:0,36,672	0/0:11,0:11:27.09:0,27,503	0/0:25,0:25:66.21:0,66,1212	0/0:32,0:32:87.28:0,87,1590	0/0:7,0:7:15.05:0,15,280
chr10	33324145	.	C	CTAT	16725.40	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=6.063;DP=405;FS=2.377;HRun=0;HaplotypeScore=84.5243;InbreedingCoeff=0.9917;MQ=79.80;MQ0=4;MQRankSum=-6.295;QD=62.64;ReadPosRankSum=1.066;VQSLOD=6.7147;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,5:6:18.06:367,18,0	1/1:0,6:6:18.06:442,18,0	0/0:16,0:16:41.30:0,41,761	0/0:11,0:11:33.11:0,33,583	0/0:18,0:17:51.16:0,51,920	0/0:15,0:12:33.10:0,33,584	0/0:13,0:10:30.08:0,30,508	1/1:5,10:18:48.10:987,48,0	0/0:11,0:11:30.10:0,30,552	1/1:6,6:12:33.11:754,33,0	1/1:1,17:20:51.18:1235,51,0	0/0:5,0:5:14.98:0,15,238	1/1:3,10:14:30.10:726,30,0	0/0:12,0:12:36.09:0,36,630	1/1:0,10:10:24.08:553,24,0	1/1:0,27:28:72.25:1770,72,0	0/0:11,0:11:33.11:0,33,617	1/1:0,5:5:15.05:370,15,0	1/1:1,16:18:48.14:1048,48,0	1/1:0,27:28:72.25:1698,72,0	1/1:0,15:15:42.14:996,42,0	1/1:0,13:13:36.12:886,36,0	0/0:13,0:13:36.12:0,36,666	0/0:13,0:13:39.12:0,39,694	1/1:0,11:11:27.09:663,27,0	1/1:0,19:20:57.18:1291,57,0	1/1:2,31:35:99:2425,99,0	1/1:0,8:8:21.07:516,21,0
chr10	33324184	.	CAAAAAA	C	6362.02	PASS	AB=1.000;AC=31;AF=0.554;AN=56;BaseQRankSum=5.320;DP=389;FS=0.449;HRun=15;HaplotypeScore=152.7603;InbreedingCoeff=0.8582;MQ=61.39;MQ0=10;MQRankSum=-0.594;QD=29.05;ReadPosRankSum=6.174;VQSLOD=2.2331;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:3,0:3:6.01:0,6,55	1/1:1,9:10:30.02:484,30,0	0/0:19,0:12:11.78:0,12,118	0/0:14,0:5:3.01:0,3,60	0/0:26,0:28:72.80:0,73,1108	0/0:16,0:17:35.71:0,36,496	0/0:10,0:12:35.66:0,36,451	1/1:14,2:16:29.84:303,30,0	0/0:12,0:13:20.86:0,21,387	1/1:4,9:13:39.06:587,39,0	1/1:9,7:16:38.06:512,38,0	0/0:8,0:8:24.08:0,24,631	1/1:5,11:16:38.88:576,39,0	0/0:10,0:10:24.07:0,24,586	0/1:9,0:10:7.01:7,0,73	1/1:9,16:25:59.82:736,60,0	0/0:8,0:11:24.85:0,25,226	1/1:1,3:4:9.01:135,9,0	1/1:9,4:14:4.73:259,5,0	1/1:8,6:14:38.37:416,38,0	1/1:2,3:5:8.95:75,9,0	1/1:4,6:10:27.01:332,27,0	0/0:11,0:11:24.04:0,24,579	0/0:14,0:14:18.06:0,18,532	1/1:4,4:8:23.95:266,24,0	1/1:9,7:16:27:390,27,0	1/1:13,19:32:53.50:959,54,0	1/1:6,3:9:22.27:325,22,0
chr10	33324194	.	A	AAAC	1655.32	PASS	AB=0.831;AC=8;AF=0.143;AN=56;BaseQRankSum=-8.164;DP=440;FS=5.301;HRun=0;HaplotypeScore=182.9221;InbreedingCoeff=0.6036;MQ=43.94;MQ0=13;MQRankSum=-1.767;QD=17.24;ReadPosRankSum=2.063;VQSLOD=3.0134;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:5:14.73:0,15,93	0/0:11,0:11:32.71:0,33,261	0/0:16,0:7:14.91:0,15,119	0/0:15,0:4:5.59:0,6,26	0/1:20,9:30:24.25:697,0,24	1/1:16,3:15:29.01:349,29,0	1/1:12,4:13:7.45:391,7,0	0/0:17,0:17:37.35:0,37,241	1/1:15,2:17:2.58:181,3,0	0/0:22,0:22:58.94:0,59,398	0/0:21,0:20:54.81:0,55,381	0/0:15,0:15:44.30:0,44,346	0/0:19,0:19:50.98:0,51,383	0/0:11,0:11:27.76:0,28,253	0/0:17,0:14:27.65:0,28,207	0/0:28,0:27:67.13:0,67,448	0/1:11,1:12:4.83:176,0,5	0/0:4,0:4:8.83:0,9,64	0/0:12,0:12:27.60:0,28,189	0/0:17,0:16:40.26:0,40,262	0/0:3,0:3:8.39:0,8,39	0/0:11,0:11:32.14:0,32,207	0/0:14,0:13:34.67:0,35,266	0/0:13,0:13:20.07:0,20,182	0/0:12,0:12:34.88:0,35,227	0/0:16,0:14:40.84:0,41,281	0/0:33,0:33:79.21:0,79,534	0/0:11,0:12:29.07:0,29,227
chr10	33324216	.	AAC	A	2396.42	PASS	AB=0.982;AC=30;AF=0.556;AN=54;BaseQRankSum=6.018;DP=456;FS=5.978;HRun=0;HaplotypeScore=172.6121;InbreedingCoeff=0.3935;MQ=37.23;MQ0=17;MQRankSum=-4.235;QD=7.68;ReadPosRankSum=1.828;VQSLOD=2.7186;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:5,1:6:3.47:14,0,3	1/1:10,0:10:17.08:155,17,0	0/0:30,0:9:5.22:0,5,154	0/0:28,0:8:4.76:0,5,160	0/1:29,0:29:11.56:12,0,259	0/0:15,0:10:26.25:0,26,148	0/0:17,0:15:33.56:0,34,180	1/1:20,0:17:20.34:107,20,0	0/0:17,0:16:2.35:0,2,110	1/1:27,0:27:8.52:236,9,0	1/1:17,0:16:27.33:195,27,0	0/1:18,0:18:47.96:48,0,196	1/1:17,0:17:21.61:212,22,0	0/0:11,0:11:21.54:0,22,219	1/1:11,3:11:25.29:182,25,0	0/1:22,0:21:4.15:143,0,4	0/0:10,0:10:5.58:0,6,131	0/1:4,0:4:6.52:23,0,7	1/1:11,0:10:0.87:85,1,0	1/1:17,1:17:25.72:215,26,0	./.	1/1:11,0:10:25.36:149,25,0	0/1:15,0:14:3.32:3,0,230	0/0:14,0:14:12.72:0,13,247	0/1:16,0:16:1.89:100,0,2	0/1:21,0:18:3.38:144,0,3	1/1:24,0:24:47.19:362,47,0	1/1:12,0:11:9.62:187,10,0
chr10	33324218	.	CAA	C	3739.78	PASS	AB=0.667;AC=31;AF=0.574;AN=54;BaseQRankSum=2.481;DP=443;FS=17.350;HRun=10;HaplotypeScore=165.4199;InbreedingCoeff=0.8476;MQ=37.23;MQ0=15;MQRankSum=-2.278;QD=15.58;ReadPosRankSum=2.831;VQSLOD=0.5235;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,1:6:6.65:56,7,0	1/1:3,7:10:28.62:293,29,0	0/0:32,0:10:20.70:0,21,220	0/0:27,0:8:20.73:0,21,258	0/0:14,0:28:34.69:0,35,168	0/0:9,0:10:21.15:0,21,108	0/0:8,0:14:18.59:0,19,63	1/1:6,13:16:9.82:243,10,0	0/0:14,0:16:23.37:0,23,115	1/1:19,8:27:37.91:377,38,0	1/1:7,7:13:34.63:347,35,0	0/0:18,0:18:38.12:0,38,427	1/1:7,9:16:28.58:327,29,0	0/0:11,0:11:23.90:0,24,247	1/1:9,5:11:22.13:224,22,0	1/1:11,9:19:19.06:296,19,0	0/0:7,0:10:10.41:0,10,45	0/1:2,2:4:15.77:55,0,16	1/1:6,5:10:28.10:257,28,0	1/1:14,3:16:10.22:174,10,0	./.	1/1:6,5:10:10.35:166,10,0	0/0:15,0:14:33.74:0,34,352	0/0:13,0:13:23.89:0,24,299	1/1:12,3:15:33.47:262,33,0	1/1:14,7:18:1.10:208,1,0	1/1:13,10:23:32.39:347,32,0	1/1:12,0:11:18.37:108,18,0
chr10	33324226	.	A	AC	4282.25	PASS	AB=0.932;AC=31;AF=0.554;AN=56;BaseQRankSum=3.178;DP=411;FS=7.528;HRun=0;HaplotypeScore=146.2456;InbreedingCoeff=0.6136;MQ=36.02;MQ0=14;MQRankSum=-1.151;QD=17.27;ReadPosRankSum=3.168;VQSLOD=6.4676;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,2:5:9.50:108,9,0	1/1:8,3:11:32.42:278,32,0	0/0:39,0:9:8.66:0,9,182	0/0:32,0:10:15.78:0,16,208	0/0:21,0:21:7.71:0,8,137	0/1:11,0:9:2.42:2,0,58	0/0:11,0:10:10.38:0,10,67	0/1:19,3:19:59.52:151,0,60	0/1:15,0:15:3.36:3,0,70	1/1:12,11:23:52.50:436,52,0	1/1:8,6:13:35.82:354,36,0	0/0:17,0:17:42.79:0,43,382	1/1:11,4:15:22.74:350,23,0	0/0:11,0:11:23.90:0,24,237	0/1:10,4:11:24.81:121,0,25	1/1:12,5:16:43.40:363,43,0	0/0:6,0:6:11.42:0,11,69	0/1:3,0:3:26.60:54,0,27	1/1:10,4:12:25.62:223,26,0	1/1:9,4:13:10.84:288,11,0	0/0:1,0:1:2.92:0,3,17	1/1:7,2:8:12.47:143,12,0	0/0:14,0:13:26.93:0,27,303	0/0:11,0:11:23.89:0,24,263	1/1:5,10:15:40.96:409,41,0	1/1:15,6:18:25.33:430,25,0	1/1:14,4:18:45.40:360,45,0	1/1:3,5:7:20.07:207,20,0
chr10	33324272	.	C	CA	150.31	PASS	AB=0.972;AC=14;AF=0.250;AN=56;BaseQRankSum=1.519;DP=522;FS=19.309;HRun=12;HaplotypeScore=167.4346;InbreedingCoeff=-0.0975;MQ=43.04;MQ0=24;MQRankSum=-1.302;QD=0.58;ReadPosRankSum=-0.579;VQSLOD=0.1675;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:12:2.41:0,2,89	0/0:8,0:8:6.59:0,7,100	0/1:38,0:5:14.24:14,0,22	0/1:45,0:9:16.11:16,0,56	0/1:14,4:18:6:75,0,6	1/1:9,6:15:0.89:27,1,0	0/1:13,0:11:12.30:38,0,12	0/0:17,0:16:32.15:0,32,320	0/1:16,0:15:1.84:31,0,2	0/0:29,1:30:16.21:0,16,526	0/1:19,0:19:8.08:8,0,256	0/1:21,0:20:43.01:43,0,68	0/0:15,0:14:12.74:0,13,132	0/0:13,0:12:2.52:0,3,23	0/0:19,0:19:9.12:0,9,121	0/0:27,0:27:51.35:0,51,415	0/1:10,1:10:12.20:19,0,12	0/0:6,0:5:8.76:0,9,79	0/0:23,0:17:29.48:0,29,268	0/0:24,0:24:32.95:0,33,366	0/0:6,0:4:1.78:0,2,8	0/1:7,0:6:1.34:1,0,54	0/1:14,0:14:0.41:0,0,83	0/0:8,1:9:12.53:0,13,58	0/0:23,0:23:34.05:0,34,226	0/0:32,0:31:52.09:0,52,539	0/1:23,1:24:9.53:10,0,227	0/1:15,0:12:2.54:3,0,123
chr10	33324287	.	AAC	A	1917.51	PASS	AB=0.993;AC=25;AF=0.446;AN=56;BaseQRankSum=-4.091;DP=536;FS=28.357;HRun=0;HaplotypeScore=160.0424;InbreedingCoeff=-0.0844;MQ=59.47;MQ0=15;MQRankSum=-0.538;QD=4.81;ReadPosRankSum=-6.462;VQSLOD=-0.6060;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:14,0:14:24.41:102,0,24	1/1:5,1:6:4.37:41,4,0	0/0:29,0:10:9.93:0,10,118	0/1:34,0:14:0.62:1,0,144	0/0:27,0:25:36.03:0,36,386	0/0:19,0:19:9.47:0,9,169	0/0:12,0:10:22.08:0,22,195	1/1:20,2:21:26.80:230,27,0	0/0:15,0:14:16.09:0,16,194	0/1:30,1:31:45.51:119,0,46	0/1:21,0:21:76.98:78,0,77	0/1:22,0:21:13.77:14,0,167	0/1:17,0:16:42.41:79,0,42	0/0:13,0:13:8.98:0,9,79	0/1:18,0:17:24.32:84,0,24	0/1:25,0:25:78.53:79,0,87	0/0:11,0:10:1.39:0,1,144	1/1:6,0:5:10.10:61,10,0	0/1:21,0:18:7.52:167,0,8	0/1:27,0:27:29.29:170,0,29	1/1:13,0:12:19.68:153,20,0	1/1:12,0:11:15.95:131,16,0	0/1:15,0:15:7.85:8,0,121	0/1:12,0:11:21.22:34,0,21	0/1:26,0:26:9.25:106,0,9	0/1:33,1:33:35.43:265,0,35	0/1:22,1:23:0.02:165,0,0	0/0:11,0:9:2.27:0,2,14
chr10	33324288	.	AC	A	4251.21	PASS	AB=0.987;AC=38;AF=0.679;AN=56;BaseQRankSum=-2.774;DP=486;FS=11.913;HRun=1;HaplotypeScore=130.5334;InbreedingCoeff=0.5521;MQ=63.15;MQ0=14;MQRankSum=-1.617;QD=11.98;ReadPosRankSum=-3.604;VQSLOD=1.5866;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:14:21.38:187,21,0	1/1:6,0:6:14.82:98,15,0	0/0:27,0:10:0.84:0,1,73	0/0:29,0:15:12.49:0,12,146	0/0:24,0:22:12.23:0,12,282	0/0:18,0:18:4.02:0,4,140	0/1:13,0:11:10.64:11,0,136	1/1:21,1:21:40.92:330,41,0	0/0:11,0:11:20.35:0,20,148	1/1:22,3:25:50.99:354,51,0	1/1:15,2:17:13.39:157,13,0	0/1:17,1:17:70.62:71,0,129	1/1:16,0:16:23.45:164,23,0	0/0:10,0:10:8.91:0,9,65	1/1:18,0:17:34.53:189,35,0	1/1:24,1:25:30.33:191,30,0	0/0:11,0:10:1.14:0,1,129	1/1:5,1:5:11.56:91,12,0	1/1:18,4:19:45.36:335,45,0	1/1:19,5:24:52.74:428,53,0	1/1:11,0:10:21.35:168,21,0	1/1:10,1:11:26.91:202,27,0	0/1:13,0:13:29.61:30,0,64	0/1:12,0:11:2.53:69,0,3	1/1:20,3:23:48.03:330,48,0	1/1:27,4:30:41.22:476,41,0	1/1:16,4:20:40.17:303,40,0	1/1:8,0:7:9.52:70,10,0
chr10	33324850	.	GAC	G	2706.83	PASS	AB=0.964;AC=40;AF=0.714;AN=56;BaseQRankSum=-1.701;DP=477;FS=28.982;HRun=0;HaplotypeScore=76.6973;InbreedingCoeff=0.4318;MQ=52.75;MQ0=19;MQRankSum=-0.949;QD=6.98;ReadPosRankSum=1.008;VQSLOD=1.3057;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:19:14.97:122,15,0	1/1:2,0:2:2.97:20,3,0	0/1:39,0:15:16.81:17,0,142	0/1:56,0:12:55.27:61,0,55	0/1:21,8:28:1.93:2,0,130	0/0:27,0:26:10.87:0,11,209	0/1:16,0:16:47.77:48,0,51	1/1:17,0:16:45.33:373,45,0	0/1:21,0:21:1.93:2,0,146	1/1:16,0:16:41.81:345,42,0	1/1:8,0:8:5.99:50,6,0	0/0:13,0:13:17.78:0,18,142	1/1:12,0:11:29.49:224,29,0	0/0:15,0:15:1.09:0,1,79	1/1:2,15:16:3.01:44,3,0	1/1:14,0:14:24.94:194,25,0	0/1:23,0:23:1.95:2,0,213	1/1:4,0:4:6.87:51,7,0	1/1:5,0:4:11.92:89,12,0	1/1:12,1:13:32.59:227,33,0	1/1:15,0:15:29.97:252,30,0	1/1:16,0:16:26.77:194,27,0	0/0:18,0:18:22.84:0,23,143	0/0:16,0:15:14.86:0,15,120	1/1:4,0:3:8.88:58,9,0	1/1:16,0:16:47.61:349,48,0	1/1:3,15:17:3.01:43,3,0	1/1:6,0:5:14.95:117,15,0
chr10	33324852	.	CAG	C	251.39	PASS	AB=1.000;AC=20;AF=0.476;AN=42;BaseQRankSum=-1.573;DP=480;FS=13.169;HRun=0;HaplotypeScore=85.8753;InbreedingCoeff=0.3222;MQ=52.05;MQ0=21;MQRankSum=0.414;QD=1.19;ReadPosRankSum=1.772;VQSLOD=0.7629;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:19:0.47:0,0,1	./.	./.	0/0:61,0:12:0:0,0,0	1/1:27,1:27:6.45:54,6,0	1/1:15,11:26:5.85:47,6,0	1/1:4,11:15:10.84:105,11,0	./.	1/1:21,0:21:8.98:86,9,0	1/1:13,0:13:1.65:5,2,0	0/0:9,0:9:1.27:0,1,21	0/0:8,0:13:3:0,3,26	0/1:14,0:13:5.93:6,0,18	0/0:14,0:14:3:0,3,25	1/1:16,0:15:2.96:19,3,0	0/0:14,0:14:5.93:0,6,20	0/1:11,0:23:17.35:17,0,110	./.	./.	0/0:14,0:14:0:0,0,0	0/1:15,0:15:0.01:0,0,0	./.	0/0:6,0:19:7.77:0,8,44	0/1:12,0:16:0.11:0,0,0	./.	0/0:16,0:16:3.81:0,4,18	1/1:16,0:15:2.99:24,3,0	1/1:6,0:5:1.55:4,2,0
chr10	33329854	.	AC	A	12308.44	PASS	AB=0.889;AC=55;AF=0.982;AN=56;BaseQRankSum=-1.732;DP=551;FS=0.000;HRun=5;HaplotypeScore=47.4765;InbreedingCoeff=-0.0254;MQ=44.64;MQ0=37;MQRankSum=-1.732;QD=22.34;ReadPosRankSum=1.173;VQSLOD=3.6601;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,24:28:60.06:649,60,0	1/1:2,12:13:27.08:306,27,0	1/1:13,5:7:8.61:77,9,0	0/1:14,2:6:8.39:65,0,8	1/1:2,29:27:60.13:663,60,0	1/1:0,12:12:30.05:327,30,0	1/1:6,15:13:21.06:238,21,0	1/1:2,5:1:3.01:34,3,0	1/1:2,19:18:48.14:544,48,0	1/1:2,21:20:51.14:571,51,0	1/1:1,26:26:60:630,60,0	1/1:0,16:16:45.13:510,45,0	1/1:3,20:22:48.07:528,48,0	1/1:1,20:20:51.15:578,51,0	1/1:0,22:18:47.97:487,48,0	1/1:0,10:10:27.08:306,27,0	1/1:3,16:17:27.08:306,27,0	1/1:2,10:12:27.08:306,27,0	1/1:7,10:10:30.09:340,30,0	1/1:2,36:34:87.21:972,87,0	1/1:3,11:13:30.09:340,30,0	1/1:1,15:15:36.05:393,36,0	1/1:4,24:25:63.13:695,63,0	1/1:4,13:17:30.08:337,30,0	1/1:2,18:19:39.11:442,39,0	1/1:2,25:25:75.21:851,75,0	1/1:2,23:25:59.86:679,60,0	1/1:0,4:4:12.03:136,12,0
chr10	33330961	.	TC	T	117.54	PASS	AC=8;AF=0.667;AN=12;BaseQRankSum=2.054;DP=27;FS=0.000;HRun=1;HaplotypeScore=36.6096;MQ=18.18;MQ0=13;MQRankSum=0.573;QD=19.59;ReadPosRankSum=0.573;VQSLOD=3.5684;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:7,0:2:6.02:0,6,93	./.	./.	./.	./.	./.	1/1:0,1:1:3:26,3,0	./.	1/1:0,1:1:3.01:36,3,0	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	1/1:0,3:3:8.99:97,9,0	./.	./.	./.	1/1:1,0:1:3.01:39,3,0	0/0:1,0:1:2.37:0,2,8	./.
chr10	33330985	.	T	TG	88.37	PASS	AC=10;AF=0.714;AN=14;BaseQRankSum=1.733;DP=17;FS=16.532;HRun=0;HaplotypeScore=36.8217;MQ=65.37;MQ0=0;MQRankSum=0.000;QD=11.05;ReadPosRankSum=1.733;VQSLOD=2.0193;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:2,0:1:3.01:0,3,36	0/0:4,0:1:3.01:0,3,39	./.	./.	./.	./.	./.	./.	1/1:0,1:1:2.60:10,3,0	./.	1/1:1,0:1:2.90:16,3,0	./.	./.	1/1:2,0:2:6.02:65,6,0	./.	./.	./.	./.	./.	1/1:0,2:2:5.62:28,6,0	./.	./.	./.	1/1:1,1:2:5.99:52,6,0	./.	./.
chr10	33342253	.	T	TTC	6223.64	PASS	AB=0.749;AC=22;AF=0.393;AN=56;BaseQRankSum=6.679;DP=469;FS=123.639;HRun=0;HaplotypeScore=159.9238;InbreedingCoeff=-0.4963;MQ=58.39;MQ0=1;MQRankSum=-9.672;QD=20.75;ReadPosRankSum=3.544;VQSLOD=1.8373;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,123,1910	0/1:3,4:7:19.16:221,0,19	0/0:20,0:19:47.89:0,48,724	0/0:12,0:12:33.11:0,33,528	0/1:9,8:17:33.12:430,0,33	0/1:7,4:11:86.34:258,0,86	0/1:16,7:23:99:335,0,268	0/1:15,2:17:99:176,0,204	0/1:8,5:13:99:253,0,115	0/1:8,3:11:99:205,0,100	0/1:5,4:9:44.33:220,0,44	0/0:17,0:17:48.15:0,48,758	0/1:7,5:12:97.75:247,0,98	0/0:32,0:32:93.30:0,93,1489	0/1:15,10:25:99:622,0,135	0/1:7,9:16:89.50:457,0,90	0/1:15,7:22:99:274,0,164	0/1:12,5:17:99:238,0,162	0/1:4,0:4:48.35:67,0,48	0/1:5,8:13:43.16:397,0,43	0/1:13,2:15:80.86:120,0,81	0/1:9,7:16:55.08:365,0,55	0/0:14,0:14:36.11:0,36,563	0/0:32,0:32:87.30:0,87,1415	1/1:5,12:17:25.23:689,25,0	0/1:10,5:15:99:316,0,202	0/1:12,5:17:99:290,0,168	0/1:2,1:3:31.54:44,0,32
chr10	33342256	.	A	AT	7702.94	PASS	AB=0.538;AC=41;AF=0.732;AN=56;BaseQRankSum=11.678;DP=439;FS=49.692;HRun=0;HaplotypeScore=141.9659;InbreedingCoeff=0.8864;MQ=59.75;MQ0=1;MQRankSum=-13.316;QD=28.53;ReadPosRankSum=0.288;VQSLOD=0.9865;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,114,1593	1/1:0,1:5:14.99:146,15,0	0/0:19,0:17:35.80:0,36,553	0/0:14,0:14:42.13:0,42,566	1/1:5,6:19:32.93:341,33,0	1/1:1,6:11:23.99:291,24,0	1/1:1,15:23:57.09:737,57,0	1/1:2,7:11:30.06:419,30,0	1/1:0,7:12:33.03:409,33,0	1/1:0,5:8:24:285,24,0	1/1:0,3:7:21.03:247,21,0	0/0:18,0:18:48.16:0,48,671	1/1:0,6:11:30.02:362,30,0	0/0:34,0:34:99:0,99,1383	1/1:3,9:21:32.30:581,32,0	1/1:1,6:16:42:460,42,0	1/1:2,10:19:45.04:541,45,0	1/1:3,10:18:48.03:608,48,0	1/1:2,2:4:5.97:96,6,0	1/1:0,3:11:33:346,33,0	1/1:3,10:15:18.97:240,19,0	1/1:3,5:13:27.90:317,28,0	0/0:12,0:12:33.10:0,33,444	0/0:33,0:33:90.30:0,90,1251	0/1:2,1:14:5.81:274,0,6	1/1:3,8:14:31.55:448,32,0	1/1:2,9:15:33.55:486,34,0	1/1:0,1:3:6:71,6,0
chr10	33343235	.	TTA	T	14730.02	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=11.112;DP=487;FS=4.867;HRun=0;HaplotypeScore=120.7879;InbreedingCoeff=0.9801;MQ=62.40;MQ0=0;MQRankSum=0.114;QD=36.64;ReadPosRankSum=2.740;VQSLOD=7.0613;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:57.03:0,57,881	1/1:0,11:11:27.09:385,27,0	0/0:7,0:7:7.59:0,8,260	0/0:7,0:6:17.83:0,18,205	1/1:1,19:20:40.07:612,40,0	1/1:0,21:21:51.17:728,51,0	1/1:0,19:19:48.16:685,48,0	1/1:0,33:33:99:1300,99,0	1/1:2,10:12:36.03:468,36,0	1/1:0,36:36:99:1367,105,0	1/1:0,25:25:75.17:1040,75,0	0/0:12,0:12:36.11:0,36,621	1/1:0,20:20:51.17:726,51,0	0/0:17,0:17:50.97:0,51,784	1/1:0,19:19:54.18:771,54,0	1/1:1,14:15:42.11:578,42,0	1/1:0,15:15:30.05:403,30,0	1/1:0,12:12:21.07:299,21,0	1/1:0,17:17:51.13:688,51,0	1/1:0,28:28:81.09:1079,81,0	1/1:0,7:7:18.06:256,18,0	1/1:0,24:24:65.98:864,66,0	0/0:14,0:14:42.13:0,42,752	0/0:7,0:7:21.05:0,21,354	1/1:1,15:16:36.12:512,36,0	1/1:0,21:21:63.18:863,63,0	1/1:1,23:24:57.14:813,57,0	1/1:0,7:7:21.07:293,21,0
chr10	33344014	.	CATATATATATATATATATATATATATATATATATATAT	C	1333.82	PASS	AC=10;AF=0.833;AN=12;BaseQRankSum=0.742;DP=132;FS=0.000;HRun=0;HaplotypeScore=166.2432;MQ=61.90;MQ0=6;MQRankSum=-0.742;QD=32.53;ReadPosRankSum=0.742;VQSLOD=2.4370;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	./.	./.	1/1:7,0:7:0.47:1,0,0	./.	1/1:5,0:7:3.01:255,3,0	./.	./.	./.	./.	./.	./.	1/1:8,2:10:3.01:288,3,0	0/0:3,0:2:3.01:0,3,333	./.	./.	./.	./.	./.	./.	./.	./.	1/1:6,1:7:3.01:288,3,0	1/1:7,3:10:6.02:577,6,0	./.
chr10	33344124	.	TGAGAGAGAGAGA	T	1613.23	PASS	AB=0.682;AC=17;AF=0.472;AN=36;BaseQRankSum=3.646;DP=227;FS=17.914;HRun=0;HaplotypeScore=78.8729;InbreedingCoeff=0.5914;MQ=59.31;MQ0=25;MQRankSum=-3.802;QD=23.38;ReadPosRankSum=1.627;VQSLOD=0.8524;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:17:36.07:0,36,1633	./.	0/0:16,0:9:24.34:0,24,728	0/0:14,0:9:22.89:0,23,1104	0/0:3,10:12:0.47:0,0,1	./.	1/1:12,3:10:3.01:91,3,0	1/1:1,1:2:3.01:106,3,0	./.	1/1:4,5:8:15.05:429,15,0	./.	0/0:7,0:6:18.06:0,18,990	./.	0/0:7,0:8:11.93:0,12,691	0/1:1,2:3:0:0,0,0	./.	1/1:5,2:5:6.02:210,6,0	0/1:3,1:3:15.26:35,0,15	./.	./.	./.	./.	0/0:5,0:5:6.02:0,6,213	0/0:10,0:8:12.04:0,12,642	0/1:5,6:9:0:0,0,1	1/1:3,5:7:15.04:460,15,0	1/1:4,2:6:5.92:220,6,0	1/1:1,3:3:6.02:196,6,0
chr10	33345923	.	C	CTT	4323.77	PASS	AC=20;AF=0.385;AN=52;BaseQRankSum=11.600;DP=521;FS=3.025;HRun=2;HaplotypeScore=65.9214;InbreedingCoeff=0.9712;MQ=32.29;MQ0=154;MQRankSum=-3.179;QD=25.89;ReadPosRankSum=-0.464;VQSLOD=3.5068;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:27:45.15:0,45,654	0/0:11,0:8:24.01:0,24,327	./.	./.	1/1:1,14:12:18.06:335,18,0	1/1:1,14:13:27.09:504,27,0	1/1:1,11:6:8.75:168,9,0	0/0:14,0:8:18.06:0,18,264	1/1:1,19:12:33.11:569,33,0	0/0:30,0:16:48.16:0,48,707	0/0:22,0:17:36.10:0,36,529	1/1:1,14:14:36.08:637,36,0	0/0:26,0:22:54.07:0,54,787	1/1:1,16:15:26.68:504,27,0	1/1:1,18:14:24.08:446,24,0	0/0:24,1:23:10.16:0,10,856	1/1:0,10:6:15.05:281,15,0	0/0:9,0:8:15.05:0,15,221	0/0:21,0:18:51.17:0,51,751	0/0:19,0:15:33.11:0,33,485	0/0:16,0:11:27.09:0,27,397	0/0:26,0:21:42.03:0,42,618	1/1:1,18:15:30.02:488,30,0	1/1:1,22:19:21.07:393,21,0	0/0:24,0:9:27.09:0,27,397	0/0:23,0:16:44.93:0,45,589	0/0:15,0:14:36.10:0,36,503	0/0:7,0:6:15.02:0,15,221
chr10	33352593	.	C	CATAGAAGATACA	11906.71	PASS	AB=1.000;AC=16;AF=0.286;AN=56;BaseQRankSum=-1.904;DP=553;FS=10.815;HRun=0;HaplotypeScore=183.6122;InbreedingCoeff=0.8224;MQ=58.24;MQ0=2;MQRankSum=-12.380;QD=73.50;ReadPosRankSum=0.975;VQSLOD=3.7267;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,5:14:24.08:1251,24,0	0/0:15,0:15:39.13:0,39,1373	0/0:20,0:17:44.74:0,45,1511	0/0:25,0:24:44.88:0,45,1321	1/1:7,6:13:24.04:1112,24,0	1/1:6,9:15:36.12:1969,36,0	1/1:16,0:16:36.12:1425,36,0	0/0:35,0:35:84.29:0,84,2860	1/1:4,14:18:39.13:2337,39,0	0/0:21,0:21:51.17:0,51,1796	0/0:14,0:14:27.08:0,27,893	0/0:20,0:20:51.12:0,51,1542	0/0:21,0:21:57.20:0,57,1911	0/0:28,0:28:78.25:0,78,2595	1/1:13,9:24:45.15:2390,45,0	0/0:20,0:20:57.20:0,57,2016	1/1:11,3:17:30.10:1252,30,0	0/1:22,0:23:99:132,0,1421	0/0:13,0:13:24.08:0,24,735	0/0:28,0:28:69.24:0,69,2488	0/0:16,0:16:45.15:0,45,1575	0/0:21,0:21:48.13:0,48,1584	0/0:20,0:20:51.11:0,51,1635	0/1:21,0:21:39.61:40,0,1698	0/0:18,0:18:51.15:0,51,1694	0/0:23,0:23:63.19:0,63,2059	0/0:27,0:26:72.25:0,72,2509	0/0:6,0:6:18.06:0,18,650
chr10	33353263	.	CAA	C	8373.49	PASS	AB=1.000;AC=42;AF=0.750;AN=56;BaseQRankSum=1.093;DP=737;FS=6.929;HRun=5;HaplotypeScore=177.2631;InbreedingCoeff=0.8303;MQ=54.44;MQ0=27;MQRankSum=-1.418;QD=14.90;ReadPosRankSum=-1.897;VQSLOD=0.7798;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:27,4:30:41.89:417,42,0	1/1:3,3:7:18:171,18,0	0/0:39,0:12:7.28:0,7,203	0/0:44,0:17:22.15:0,22,346	1/1:31,5:35:17.80:374,18,0	1/1:24,3:27:16.01:270,16,0	0/1:23,0:23:19.24:189,0,19	1/1:29,0:29:74.24:563,74,0	1/1:23,0:23:20.69:250,21,0	1/1:22,4:26:53.51:559,54,0	1/1:21,10:30:65.47:607,65,0	0/0:24,0:24:62.07:0,62,849	1/1:12,6:18:29.94:272,30,0	0/0:21,0:21:41.48:0,41,630	0/1:29,0:29:0.01:178,0,0	1/1:17,5:23:58.52:506,59,0	1/1:21,4:25:20.20:268,20,0	1/1:27,3:29:26.54:364,27,0	1/1:23,1:14:35.45:290,35,0	1/1:16,7:24:56.08:479,56,0	1/1:17,1:18:43.76:335,44,0	1/1:22,6:30:50.92:436,51,0	0/0:17,0:17:45.08:0,45,730	0/0:29,0:29:66.02:0,66,997	1/1:21,5:25:35.97:327,36,0	1/1:25,6:30:73.78:550,74,0	1/1:17,6:24:49.01:393,49,0	1/1:20,4:24:71.66:575,72,0
chr10	33353283	.	CAA	C	10794.81	PASS	AB=0.917;AC=42;AF=0.750;AN=56;BaseQRankSum=1.475;DP=748;FS=11.222;HRun=3;HaplotypeScore=170.8396;InbreedingCoeff=0.8386;MQ=52.07;MQ0=30;MQRankSum=1.744;QD=19.42;ReadPosRankSum=0.848;VQSLOD=1.6125;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:28:27.59:28,0,36	1/1:7,3:10:26.99:256,27,0	0/0:40,0:14:11.70:0,12,185	0/0:50,0:16:30.64:0,31,281	1/1:31,3:33:73.97:724,74,0	1/1:21,5:26:72.41:721,72,0	1/1:16,9:25:43.10:559,43,0	1/1:29,4:30:67.21:713,67,0	1/1:21,4:25:65.24:637,65,0	1/1:25,5:29:82.09:766,82,0	1/1:20,9:29:73.26:733,73,0	0/0:26,0:26:50.93:0,51,537	1/1:3,15:17:26.99:315,27,0	0/0:21,0:21:36.02:0,36,389	1/1:30,0:30:14.15:201,14,0	1/1:13,5:19:44.05:486,44,0	1/1:23,2:25:44.11:497,44,0	0/1:20,5:24:0.66:369,0,1	1/1:19,1:10:28.21:287,28,0	1/1:19,8:27:68.31:650,68,0	1/1:24,5:28:62.80:591,63,0	1/1:4,21:25:41.99:429,42,0	0/0:22,0:22:24.13:0,24,489	0/0:32,0:32:49.01:0,49,534	1/1:3,26:28:21.05:241,21,0	1/1:2,30:31:83.79:767,84,0	1/1:3,16:19:31.53:357,32,0	1/1:15,2:17:50.81:470,51,0
chr10	33353285	.	A	AAC	1862.46	PASS	AB=0.853;AC=14;AF=0.250;AN=56;BaseQRankSum=-9.274;DP=756;FS=8.132;HRun=0;HaplotypeScore=203.8964;InbreedingCoeff=0.1636;MQ=52.24;MQ0=29;MQRankSum=1.859;QD=5.89;ReadPosRankSum=-1.668;VQSLOD=2.2621;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:27:12.82:176,13,0	0/0:10,0:10:8.33:0,8,38	0/0:38,0:14:29.54:0,30,305	0/0:53,0:17:26.57:0,27,231	0/1:35,0:34:47.39:47,0,119	0/1:26,0:26:6.03:6,0,102	0/0:25,0:25:15.46:0,15,97	0/1:33,0:30:15.55:36,0,16	0/0:25,0:25:13.77:0,14,86	0/0:32,0:30:3.42:0,3,73	0/0:30,0:30:32.30:0,32,145	0/1:10,16:27:41:349,0,41	0/0:18,0:17:17.91:0,18,75	0/1:8,15:23:85.04:169,0,85	1/1:29,0:29:17.51:173,18,0	0/0:19,0:19:5.67:0,6,92	0/0:24,0:24:28.05:0,28,137	0/0:25,0:24:13.26:0,13,131	0/0:21,0:11:4.97:0,5,36	0/0:29,0:29:11.05:0,11,102	0/1:31,0:30:9.19:9,0,38	0/0:24,0:24:7.14:0,7,84	0/1:8,15:23:38.36:394,0,38	1/1:6,24:30:9.70:627,10,0	0/0:29,0:28:18.44:0,18,80	0/1:32,0:32:39.76:40,0,56	0/0:19,0:19:33.41:0,33,157	0/0:17,0:17:16.37:0,16,68
chr10	33353293	.	C	CAA	2398.39	PASS	AB=0.932;AC=16;AF=0.286;AN=56;BaseQRankSum=1.354;DP=784;FS=3.170;HRun=1;HaplotypeScore=202.7279;InbreedingCoeff=0.3936;MQ=55.01;MQ0=21;MQRankSum=1.366;QD=7.79;ReadPosRankSum=3.773;VQSLOD=0.6417;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:30:32.77:33,0,78	0/0:11,0:11:29.98:0,30,273	0/0:43,0:19:49.77:0,50,630	0/0:53,0:19:51.19:0,51,534	1/1:36,0:35:29.31:434,29,0	1/1:31,0:31:2.80:348,3,0	1/1:23,0:23:26.54:209,27,0	0/0:33,0:30:82.07:0,82,658	1/1:27,0:27:0.99:334,1,0	0/0:28,0:27:76.86:0,77,685	0/0:31,0:32:77.84:0,78,706	0/1:26,0:26:99:158,0,168	0/0:18,0:17:26.64:0,27,249	0/1:22,0:22:60.41:60,0,199	0/1:10,21:32:11.74:269,0,12	0/0:21,0:21:52.21:0,52,496	1/1:26,0:26:39.36:282,39,0	0/0:26,0:25:55.90:0,56,469	0/0:20,0:13:38.77:0,39,352	0/0:32,0:32:79.13:0,79,679	0/0:36,0:35:71.74:0,72,604	0/0:25,0:25:42.23:0,42,352	0/1:24,0:24:99:160,0,169	0/1:31,0:31:41.26:288,0,41	0/0:27,0:27:21.04:0,21,215	0/0:31,0:31:69.69:0,70,577	0/0:21,0:21:41.55:0,42,388	0/0:19,0:19:56.84:0,57,476
chr10	33353839	.	TAAAG	T	1490.79	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.371;DP=638;FS=0.720;HRun=0;HaplotypeScore=127.4625;InbreedingCoeff=0.9696;MQ=84.61;MQ0=0;MQRankSum=-0.994;QD=48.09;ReadPosRankSum=2.913;VQSLOD=4.0574;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,120,3120	0/0:12,0:12:33.11:0,33,836	0/0:19,0:19:45.13:0,45,1087	0/0:20,0:20:57.19:0,57,1444	0/0:41,0:40:99:0,114,2959	0/0:38,0:38:99:0,108,2875	0/0:27,0:27:78.27:0,78,2081	0/0:22,0:22:60.21:0,60,1544	0/0:26,0:26:69.24:0,69,1791	0/0:24,0:24:66.22:0,66,1710	0/0:18,0:18:48.16:0,48,1280	0/0:16,0:16:48.16:0,48,1252	0/0:27,0:27:81.26:0,81,2077	0/0:24,0:24:66.23:0,66,1760	1/1:0,30:31:87.30:1586,87,0	0/0:26,0:26:72.25:0,72,1917	0/0:26,0:26:78.27:0,78,2051	0/0:12,0:12:33.11:0,33,815	0/0:19,0:19:51.18:0,51,1359	0/0:24,0:24:69.24:0,69,1798	0/0:28,0:28:84.29:0,84,2238	0/0:12,0:12:33.11:0,33,880	0/0:18,0:18:54.19:0,54,1440	0/0:22,0:22:66.23:0,66,1716	0/0:14,0:14:42.14:0,42,1120	0/0:25,0:25:72.25:0,72,1907	0/0:22,0:22:63.22:0,63,1651	0/0:4,0:4:12.04:0,12,320
chr10	33361219	.	T	TAC	1545.81	PASS	AB=0.845;AC=25;AF=0.521;AN=48;BaseQRankSum=-3.153;DP=431;FS=5.760;HRun=0;HaplotypeScore=69.6722;InbreedingCoeff=-0.1090;MQ=56.23;MQ0=11;MQRankSum=2.020;QD=5.75;ReadPosRankSum=1.273;VQSLOD=2.0770;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:26:22.24:223,22,0	1/1:4,3:7:6.02:89,6,0	./.	./.	./.	0/0:7,0:9:2.84:0,3,14	0/0:11,0:14:2.84:0,3,14	0/0:22,0:21:2.90:0,3,16	0/0:6,0:12:8.52:0,9,42	0/1:20,0:20:11.76:87,0,12	1/1:10,4:13:6.02:89,6,0	1/1:12,0:11:2.71:44,3,0	0/1:13,2:16:25.23:38,0,25	0/1:19,0:19:4.89:82,0,5	0/0:15,0:15:9.02:0,9,97	0/1:10,4:13:23.30:80,0,23	0/0:9,0:9:0:0,0,0	0/1:5,6:12:17.31:142,0,17	./.	1/1:4,3:8:6.02:79,6,0	0/1:16,0:16:20.20:60,0,20	0/1:11,3:14:25.24:38,0,25	0/1:11,0:11:35.09:35,0,54	0/1:10,10:20:2.62:197,0,3	0/1:9,5:12:17.24:162,0,17	1/1:8,5:13:5.75:56,6,0	0/1:21,5:24:43.13:77,0,43	1/1:2,1:3:9.01:112,9,0
chr10	33361437	.	G	GT	459.33	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-5.599;DP=601;FS=4.806;HRun=8;HaplotypeScore=65.8758;InbreedingCoeff=0.9536;MQ=69.21;MQ0=0;MQRankSum=0.325;QD=17.01;ReadPosRankSum=0.912;VQSLOD=3.6968;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,24:27:48.14:554,48,0	0/0:6,0:6:15.01:0,15,137	0/0:23,0:22:44.36:0,44,357	0/0:21,0:20:42.65:0,43,354	0/0:28,0:28:75.04:0,75,686	0/0:28,0:28:78.04:0,78,714	0/0:23,0:23:63.02:0,63,571	0/0:43,0:43:98.84:0,99,891	0/0:26,0:26:75.03:0,75,686	0/0:19,0:19:54.03:0,54,494	0/0:20,0:20:53.97:0,54,480	0/0:20,0:20:54.03:0,54,494	0/0:17,0:17:45.01:0,45,412	0/0:19,0:19:50.98:0,51,458	0/0:21,0:21:56.99:0,57,511	0/0:20,0:20:60.02:0,60,545	0/0:27,0:27:71.85:0,72,632	0/0:21,0:21:54.02:0,54,494	0/0:27,0:27:46.42:0,46,601	0/0:18,0:18:54.03:0,54,494	0/0:14,0:14:32.99:0,33,297	0/0:17,0:17:45.02:0,45,412	0/0:20,0:20:48.02:0,48,439	0/0:18,0:18:51.02:0,51,467	0/0:29,0:29:84.04:0,84,769	0/0:21,0:21:63.03:0,63,577	0/0:22,1:23:25.41:0,25,487	0/0:4,0:4:12.01:0,12,110
chr10	33363576	.	A	AT	673.58	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-7.433;DP=655;FS=4.028;HRun=7;HaplotypeScore=60.6934;InbreedingCoeff=0.9873;MQ=85.59;MQ0=0;MQRankSum=-3.943;QD=24.06;ReadPosRankSum=1.472;VQSLOD=4.1780;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:78.13:0,78,753	0/0:7,0:7:21.03:0,21,203	0/0:29,0:29:61.87:0,62,621	0/0:21,0:21:35.93:0,36,328	0/0:36,0:36:99:0,99,933	0/0:33,0:33:87.12:0,87,833	0/0:17,0:17:48.07:0,48,458	0/0:26,0:26:63.09:0,63,605	0/0:23,0:23:63.07:0,63,597	0/0:23,0:23:54.08:0,54,521	0/0:27,0:27:72.10:0,72,689	0/0:19,0:19:57.08:0,57,545	0/0:21,0:21:63.10:0,63,608	0/0:28,0:28:81.11:0,81,776	1/1:5,23:28:40.23:768,40,0	0/0:35,0:35:99:0,102,980	0/0:26,0:26:72.08:0,72,687	0/0:11,0:11:30.05:0,30,290	0/0:22,0:22:57.07:0,57,546	0/0:28,0:28:81.12:0,81,777	0/0:23,0:23:66.11:0,66,637	0/0:13,0:13:39.06:0,39,377	0/0:19,0:19:57.09:0,57,550	0/0:20,0:20:54.08:0,54,521	0/0:32,0:32:93.13:0,93,893	0/0:24,0:24:69.11:0,69,666	0/0:30,0:30:84.13:0,84,811	0/0:8,0:8:18.03:0,18,174
chr10	33363861	.	T	TAG	3039.98	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-11.046;DP=649;FS=7.522;HRun=0;HaplotypeScore=72.9945;InbreedingCoeff=0.9834;MQ=82.56;MQ0=1;MQRankSum=-2.428;QD=40.00;ReadPosRankSum=2.946;VQSLOD=5.4672;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:45.13:0,45,565	0/0:5,0:5:12.04:0,12,154	0/0:21,0:21:40.93:0,41,481	0/0:26,0:26:57.18:0,57,722	0/0:28,0:28:75.24:0,75,964	0/0:25,0:25:63.19:0,63,796	0/0:21,0:21:57.18:0,57,734	0/0:41,0:41:87.26:0,87,1093	0/0:29,0:29:72.20:0,72,898	0/0:21,0:21:60.16:0,60,734	0/0:21,0:21:51.17:0,51,656	1/1:3,27:30:75.26:1262,75,0	0/0:27,0:27:78.25:0,78,1003	0/0:16,0:16:33.09:0,33,410	0/0:24,0:24:57.18:0,57,731	0/0:31,0:31:81.26:0,81,1041	0/0:19,0:19:45.13:0,45,563	0/0:17,0:17:48.16:0,48,618	0/0:19,0:19:39.12:0,39,501	0/0:21,0:21:54.16:0,54,680	0/0:39,0:39:99:0,114,1466	0/0:19,0:19:51.15:0,51,641	1/1:4,21:25:66.23:1111,66,0	1/1:2,19:20:48.16:810,48,0	0/0:24,0:24:57.18:0,57,731	0/0:23,0:23:57.19:0,57,734	0/0:32,0:31:84.27:0,84,1079	0/0:7,0:7:15.05:0,15,193
chr10	33364020	.	A	AC	3397.32	PASS	AB=1.000;AC=48;AF=0.889;AN=54;BaseQRankSum=0.835;DP=364;FS=3.661;HRun=8;HaplotypeScore=68.6208;InbreedingCoeff=0.5021;MQ=83.56;MQ0=6;MQRankSum=-3.648;QD=10.99;ReadPosRankSum=2.920;VQSLOD=2.5413;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:19:41.89:332,42,0	./.	0/0:25,0:17:46.82:0,47,410	0/0:28,0:21:44.69:0,45,375	1/1:4,10:14:18.05:208,18,0	1/1:5,18:22:27.08:311,27,0	1/1:1,15:16:36.09:405,36,0	1/1:23,0:23:14.06:89,14,0	1/1:2,4:6:12.04:138,12,0	1/1:6,1:9:13.56:82,14,0	1/1:14,0:14:15.11:110,15,0	1/1:3,5:7:15.04:173,15,0	0/1:11,0:11:0.37:30,0,0	1/1:10,0:10:9.13:61,9,0	1/1:15,0:15:26.91:213,27,0	1/1:5,0:14:5.68:29,6,0	1/1:4,15:18:27.08:311,27,0	1/1:6,0:6:0.88:3,1,0	1/1:9,0:14:10.59:68,11,0	0/1:8,0:8:18.05:18,0,21	1/1:9,0:10:4.20:18,4,0	1/1:7,0:8:5.72:30,6,0	1/1:8,3:11:15.04:174,15,0	1/1:5,6:9:24.04:258,24,0	1/1:8,0:8:6.46:51,6,0	1/1:5,0:16:19.28:144,19,0	1/1:9,0:9:14.01:90,14,0	1/1:6,0:5:8.67:51,9,0
chr10	33364021	.	C	CG	1176.30	PASS	AB=1.000;AC=14;AF=0.259;AN=54;BaseQRankSum=-1.128;DP=367;FS=9.160;HRun=0;HaplotypeScore=77.7876;InbreedingCoeff=0.3608;MQ=82.93;MQ0=7;MQRankSum=-0.489;QD=8.40;ReadPosRankSum=9.155;VQSLOD=1.9923;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,19:20:47.86:639,48,0	./.	0/0:25,0:17:46.71:0,47,632	0/0:29,0:21:52.40:0,52,630	0/1:14,0:14:23.93:24,0,62	0/1:22,0:21:37:42,0,37	1/1:16,0:16:4.62:65,5,0	0/0:24,0:24:54.45:0,54,398	0/1:5,0:5:13.88:22,0,14	0/0:10,0:9:14.55:0,15,118	0/0:13,0:13:10.44:0,10,81	0/1:7,0:6:11.44:28,0,11	0/0:11,0:11:21.44:0,21,172	0/0:11,0:11:18.87:0,19,146	1/1:0,15:15:27.09:392,27,0	0/0:14,0:14:17.62:0,18,134	0/1:19,0:18:49.69:50,0,61	0/0:8,0:8:14.95:0,15,116	0/0:15,0:15:29.04:0,29,199	0/0:9,0:9:15.65:0,16,139	0/0:11,0:11:23.44:0,23,169	0/0:8,0:8:7.65:0,8,39	0/1:11,0:11:30.78:31,0,58	1/1:11,0:9:15.81:55,16,0	0/0:7,0:7:9.05:0,9,79	0/0:17,0:16:31.10:0,31,209	0/0:8,0:8:14.65:0,15,92	0/0:6,0:5:10.93:0,11,77
chr10	33364863	.	GT	G	13442.60	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=9.548;DP=698;FS=4.880;HRun=9;HaplotypeScore=69.2706;InbreedingCoeff=0.9989;MQ=77.43;MQ0=0;MQRankSum=-3.685;QD=23.26;ReadPosRankSum=0.837;VQSLOD=5.8084;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,32:37:98.92:893,99,0	1/1:1,17:18:42.02:384,42,0	0/0:28,0:26:59.89:0,60,626	0/0:11,0:11:29.27:0,29,304	1/1:7,30:37:87.03:796,87,0	1/1:1,23:24:66.03:604,66,0	1/1:4,15:19:42.02:384,42,0	1/1:6,31:37:90.01:818,90,0	1/1:3,10:13:27.01:247,27,0	1/1:3,32:35:96.05:879,96,0	1/1:1,15:16:47.90:427,48,0	0/0:28,0:28:69.21:0,69,796	1/1:3,18:21:51.03:467,51,0	1/1:1,19:20:54.03:494,54,0	1/1:4,24:28:72.03:659,72,0	1/1:4,21:25:60.02:549,60,0	1/1:2,18:20:48.02:439,48,0	1/1:3,11:14:27.01:247,27,0	1/1:1,21:22:60:541,60,0	1/1:1,32:33:87.04:796,87,0	1/1:4,19:23:54.03:494,54,0	1/1:2,21:23:57.03:522,57,0	0/0:36,0:36:99:0,99,1143	0/0:17,0:17:48.14:0,48,554	1/1:2,25:27:69.04:632,69,0	1/1:1,29:30:87.05:796,87,0	1/1:0,46:46:99:1153,126,0	1/1:2,8:10:24.01:220,24,0
chr10	33365823	.	G	GTGTGTGTC	3880.10	PASS	AB=0.740;AC=27;AF=0.482;AN=56;BaseQRankSum=6.148;DP=783;FS=4.447;HRun=0;HaplotypeScore=184.1248;InbreedingCoeff=-0.5107;MQ=54.45;MQ0=20;MQRankSum=-2.475;QD=5.66;ReadPosRankSum=7.363;VQSLOD=1.9723;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:50,0:49:99:147,0,358	0/1:3,0:11:29.74:71,0,30	0/0:12,0:6:4.17:0,4,46	0/1:31,0:10:11.24:11,0,56	1/1:24,0:23:0.25:120,0,0	0/0:24,0:23:5.98:0,6,48	0/1:44,0:44:99:139,0,184	0/1:46,0:43:99:334,0,260	0/1:28,0:28:99:309,0,156	0/1:10,0:26:70.38:271,0,70	0/1:7,0:17:48.76:90,0,49	0/1:32,0:32:99:248,0,175	0/1:6,0:34:99:194,0,103	0/1:9,0:24:54.03:193,0,54	1/1:5,33:45:5.75:67,6,0	0/1:9,0:28:41.92:232,0,42	0/1:20,0:19:99:228,0,142	0/1:4,0:22:39.51:88,0,40	1/1:10,0:18:23.10:192,23,0	0/1:13,0:31:90.52:117,0,91	0/1:20,0:53:90.93:187,0,91	0/1:8,0:28:68.95:97,0,69	0/0:20,0:20:17.71:0,18,144	0/0:22,0:22:3.28:0,3,24	0/0:7,0:20:2.84:0,3,14	0/1:9,0:24:30.28:331,0,30	0/1:4,0:29:21.72:190,0,22	1/1:5,0:7:2.53:27,3,0
chr10	33368672	.	G	GGTGT	12108.48	PASS	AB=0.741;AC=43;AF=0.796;AN=54;BaseQRankSum=-4.825;DP=668;FS=7.925;HRun=0;HaplotypeScore=162.2222;InbreedingCoeff=0.5579;MQ=58.03;MQ0=19;MQRankSum=-1.809;QD=22.85;ReadPosRankSum=-0.172;VQSLOD=3.7898;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:26:9.50:182,10,0	1/1:11,2:15:27.28:455,27,0	0/0:37,0:18:2.09:0,2,8	./.	1/1:36,0:36:11.39:145,11,0	1/1:16,0:15:13.83:174,14,0	1/1:22,0:22:24.04:316,24,0	1/1:33,2:36:32.09:516,32,0	1/1:23,0:23:14.83:145,15,0	1/1:23,4:30:14.26:803,14,0	1/1:15,3:18:21.77:348,22,0	0/0:5,0:26:51.06:0,51,474	1/1:12,2:17:35.38:585,35,0	1/1:14,8:22:49.05:977,49,0	1/1:10,6:19:43.76:715,44,0	1/1:15,9:26:46.98:886,47,0	1/1:14,0:13:18.40:279,18,0	1/1:10,5:17:17.35:372,17,0	1/1:16,4:17:15.04:273,15,0	1/1:14,3:18:24.08:510,24,0	0/1:17,9:27:14.50:894,0,15	1/1:24,11:35:59.36:1130,59,0	0/0:10,0:20:32.55:0,33,315	0/0:6,0:24:32.21:0,32,287	1/1:15,3:21:36.03:643,36,0	0/1:18,5:25:38.02:629,0,38	0/1:23,9:35:99:985,0,106	1/1:5,2:7:6.02:144,6,0
chr10	33368738	.	AAT	A	12115.99	PASS	AC=42;AF=0.778;AN=54;BaseQRankSum=4.172;DP=559;FS=3.602;HRun=0;HaplotypeScore=108.4643;InbreedingCoeff=0.9813;MQ=77.48;MQ0=2;MQRankSum=-6.204;QD=28.99;ReadPosRankSum=1.807;VQSLOD=6.3541;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:57.20:0,57,968	1/1:2,2:4:9.02:103,9,0	0/0:23,0:22:36.89:0,37,666	0/0:20,0:20:51.16:0,51,797	1/1:3,18:21:39.13:507,39,0	1/1:0,19:19:42.14:546,42,0	1/1:2,12:14:33.11:429,33,0	1/1:5,25:30:75.19:907,75,0	1/1:4,22:26:60.16:763,60,0	1/1:3,26:29:78.20:991,78,0	1/1:2,11:12:27:329,27,0	0/0:27,0:27:66.19:0,66,1051	1/1:3,12:15:36.10:453,36,0	1/1:5,17:22:42.14:546,42,0	1/1:5,14:19:45.12:556,45,0	1/1:1,26:27:69.15:870,69,0	1/1:2,11:13:27.09:351,27,0	1/1:4,3:7:12.03:142,12,0	1/1:1,11:12:33.11:429,33,0	1/1:2,16:18:39.13:507,39,0	1/1:8,27:34:84.26:1077,84,0	1/1:6,16:22:48.01:593,48,0	0/0:21,0:21:48.12:0,48,759	0/0:22,0:22:57.17:0,57,934	1/1:2,19:21:45.13:571,45,0	1/1:2,21:22:60.19:779,60,0	1/1:11,17:28:54.10:666,54,0	./.
chr10	33369321	.	TTCTCTCTCTCTCTCTCTCTCTCTCTC	T	12055.20	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=10.360;DP=517;FS=20.040;HRun=0;HaplotypeScore=284.8113;InbreedingCoeff=0.8555;MQ=67.43;MQ0=17;MQRankSum=-4.976;QD=42.75;ReadPosRankSum=1.474;VQSLOD=2.3292;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:19:12.02:0,12,413	1/1:1,5:6:3.01:203,3,0	0/0:24,0:19:17.73:0,18,384	0/0:26,0:15:10.88:0,11,307	0/0:23,0:22:26.72:0,27,1056	0/0:23,0:23:24.28:0,24,900	0/0:11,0:13:23.91:0,24,1361	1/1:16,13:29:42.10:825,42,0	0/0:11,0:15:15.05:0,15,653	1/1:13,16:27:45.12:1869,45,0	1/1:8,9:16:9.03:532,9,0	0/0:17,0:15:30.57:0,31,1232	1/1:3,14:17:21.07:1382,21,0	1/1:4,9:13:15.05:919,15,0	0/0:11,0:11:18.06:0,18,1324	1/1:5,8:11:9.03:599,9,0	0/0:15,0:15:18.06:0,18,1225	1/1:6,1:6:3.01:203,3,0	1/1:9,7:15:21.07:909,21,0	1/1:6,9:14:14.92:356,15,0	1/1:13,0:11:5.98:174,6,0	1/1:8,12:19:12.03:583,12,0	0/0:23,0:24:27.55:0,28,1023	0/0:17,0:21:18.53:0,19,1177	1/1:13,15:28:21.07:1174,21,0	1/1:9,19:27:48.99:1808,49,0	1/1:9,12:21:6.01:318,6,0	1/1:8,2:5:3.01:203,3,0
chr10	33369344	.	TC	T	2228.64	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=11.992;DP=484;FS=5.386;HRun=1;HaplotypeScore=116.8356;InbreedingCoeff=0.8507;MQ=50.49;MQ0=37;MQRankSum=-6.604;QD=11.49;ReadPosRankSum=8.523;VQSLOD=1.6578;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:34.99:0,35,408	1/1:5,0:5:2.22:7,2,0	0/0:33,0:9:23.17:0,23,223	0/0:49,0:13:10.87:0,11,283	0/0:23,0:22:50.96:0,51,637	0/0:25,0:24:60.14:0,60,717	0/0:23,0:21:42.73:0,43,500	1/1:15,1:15:36.11:466,36,0	0/0:19,0:19:38.34:0,38,461	1/1:17,1:16:38.63:383,39,0	1/1:9,2:10:8.24:85,8,0	0/0:16,0:14:35.90:0,36,444	1/1:14,0:14:17.91:144,18,0	1/1:10,1:11:12.68:99,13,0	0/0:14,0:14:42.09:0,42,529	1/1:10,0:8:8.24:81,8,0	0/0:16,0:15:27.94:0,28,268	1/1:3,1:2:5.02:20,5,0	1/1:8,1:7:21.07:279,21,0	1/1:13,1:11:5.23:47,5,0	1/1:4,3:5:5.98:60,6,0	1/1:13,1:13:11.24:124,11,0	0/0:24,0:22:51.15:0,51,633	0/0:24,0:24:26.47:0,26,374	1/1:17,0:16:17.51:144,18,0	1/1:22,0:20:45.87:447,46,0	1/1:12,1:13:5.23:48,5,0	1/1:8,1:2:2.22:7,2,0
chr10	33369944	.	C	CT	6875.38	PASS	AB=0.806;AC=32;AF=0.571;AN=56;BaseQRankSum=-11.816;DP=530;FS=1.136;HRun=10;HaplotypeScore=51.0576;InbreedingCoeff=0.8089;MQ=74.60;MQ0=0;MQRankSum=-0.117;QD=21.42;ReadPosRankSum=0.026;VQSLOD=5.5786;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:37:88.85:0,89,712	1/1:2,10:12:2.42:231,2,0	0/0:10,0:8:14.95:0,15,119	0/1:10,0:10:3.11:3,0,40	0/0:21,0:23:52.96:0,53,425	0/0:20,0:20:50.93:0,51,418	0/0:18,0:19:46.93:0,47,372	1/1:14,24:38:7.22:674,7,0	0/0:21,0:21:50.90:0,51,416	1/1:7,16:23:26.48:486,26,0	1/1:5,15:20:23.39:431,23,0	0/0:7,0:7:20.96:0,21,169	1/1:3,10:13:23.89:238,24,0	1/1:2,6:8:18.05:192,18,0	0/0:14,0:14:35.94:0,36,293	1/1:2,10:12:2.42:231,2,0	0/0:17,0:17:44.95:0,45,369	1/1:2,9:12:23.89:236,24,0	1/1:9,15:25:51.08:561,51,0	0/1:8,14:22:41.50:398,0,41	1/1:2,10:12:30.08:320,30,0	1/1:6,21:27:44.53:676,45,0	0/0:21,1:23:29.94:0,30,437	0/0:18,0:18:44.92:0,45,366	1/1:2,18:20:29.49:519,29,0	1/1:4,25:29:75.12:768,75,0	1/1:6,26:30:29.30:719,29,0	1/1:0,6:6:18.05:192,18,0
chr10	33371242	.	AT	A	11852.53	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=1.875;DP=587;FS=2.710;HRun=10;HaplotypeScore=57.1145;InbreedingCoeff=0.9193;MQ=67.22;MQ0=0;MQRankSum=-2.666;QD=21.32;ReadPosRankSum=4.249;VQSLOD=5.7324;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,28:34:77.98:677,78,0	1/1:1,5:6:15:130,15,0	0/0:7,0:8:5.23:0,5,140	0/0:3,0:3:9.02:0,9,95	1/1:3,30:33:89.97:781,90,0	1/1:2,26:28:59.98:521,60,0	1/1:2,17:19:44.98:391,45,0	1/1:5,30:35:89.92:771,90,0	1/1:1,18:19:50.99:443,51,0	1/1:4,23:27:68.98:599,69,0	1/1:5,31:36:86.96:755,87,0	1/1:1,14:15:35.98:313,36,0	1/1:1,17:18:47.99:417,48,0	1/1:2,19:21:53.97:469,54,0	0/0:19,1:20:25.07:0,25,496	1/1:4,19:23:41.98:365,42,0	1/1:2,20:22:50.98:443,51,0	1/1:1,16:17:47.99:417,48,0	1/1:5,19:24:56.98:495,57,0	1/1:2,22:24:56.97:495,57,0	1/1:3,13:17:43.06:351,43,0	1/1:1,16:17:47.99:417,48,0	1/1:2,24:26:71.96:625,72,0	1/1:2,12:14:35.98:313,36,0	1/1:2,19:21:47.98:417,48,0	1/1:3,20:23:59.96:517,60,0	1/1:3,25:28:71.98:623,72,0	1/1:4,5:9:14.01:110,14,0
chr10	33373713	.	GT	G	9008.08	PASS	AB=0.944;AC=54;AF=0.964;AN=56;BaseQRankSum=-2.971;DP=561;FS=0.000;HRun=1;HaplotypeScore=153.6085;InbreedingCoeff=-0.0386;MQ=71.48;MQ0=0;MQRankSum=-3.103;QD=16.06;ReadPosRankSum=4.026;VQSLOD=5.1027;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:19:53.09:355,53,0	1/1:7,0:7:20.49:132,20,0	0/1:28,0:22:77.24:77,0,224	0/1:21,3:24:43.01:91,0,43	1/1:33,0:33:62.63:505,63,0	1/1:20,0:20:56.09:344,56,0	1/1:14,0:14:41.12:263,41,0	1/1:28,0:28:66.93:374,67,0	1/1:20,0:20:57.20:400,57,0	1/1:17,0:17:48.44:264,48,0	1/1:22,1:23:65.70:459,66,0	1/1:16,0:16:46.97:299,47,0	1/1:21,0:21:58.51:386,59,0	1/1:17,0:17:47.46:337,47,0	1/1:22,0:22:63.23:430,63,0	1/1:14,0:14:41.07:264,41,0	1/1:26,0:26:61.42:392,61,0	1/1:6,0:6:14.66:92,15,0	1/1:24,0:24:65.80:404,66,0	1/1:36,0:36:99:666,101,0	1/1:19,0:19:43.33:251,43,0	1/1:7,0:7:20.38:130,20,0	1/1:25,1:26:52.45:483,52,0	1/1:21,0:21:50.59:317,51,0	1/1:12,0:12:35.22:227,35,0	1/1:18,0:18:52.74:340,53,0	1/1:35,1:35:57.67:633,58,0	1/1:7,0:7:15.46:97,15,0
chr10	33375325	.	GGAA	G	3954.62	PASS	AB=1.000;AC=40;AF=0.741;AN=54;BaseQRankSum=-2.427;DP=354;FS=1.571;HRun=0;HaplotypeScore=93.0282;InbreedingCoeff=0.7113;MQ=58.50;MQ0=5;MQRankSum=-3.596;QD=16.83;ReadPosRankSum=-1.826;VQSLOD=3.2738;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:74.10:0,74,1378	1/1:7,0:7:17.74:119,18,0	0/0:22,0:11:23.16:0,23,239	0/0:12,0:8:23.79:0,24,220	1/1:5,6:10:12.87:132,13,0	1/1:19,0:19:37.12:371,37,0	1/1:17,0:17:31.73:349,32,0	1/1:17,0:17:19.42:279,19,0	1/1:16,0:16:44.25:450,44,0	1/1:10,0:10:5.14:98,5,0	1/1:3,0:3:2.97:20,3,0	0/0:14,0:14:29.97:0,30,327	0/1:4,0:4:19.98:20,0,21	1/1:5,0:5:4.26:49,4,0	1/1:22,0:22:26.44:490,26,0	1/1:5,0:5:8.29:68,8,0	1/1:16,0:15:37.41:305,37,0	0/1:7,0:7:7.22:40,0,7	1/1:19,0:19:11.57:232,12,0	1/1:7,0:7:14.87:106,15,0	1/1:16,0:15:26.82:206,27,0	1/1:8,0:8:17.84:131,18,0	0/0:14,0:14:35.82:0,36,343	0/0:21,0:21:48.19:0,48,485	1/1:5,0:5:14.96:127,15,0	1/1:18,0:18:35.32:316,35,0	1/1:3,0:3:8.71:49,9,0	./.
chr10	33375571	.	A	ATTCTTTGGGTTTTATGTCCA	26805.42	PASS	AB=0.652;AC=52;AF=0.963;AN=54;BaseQRankSum=0.096;DP=212;FS=21.101;HRun=0;HaplotypeScore=261.2668;InbreedingCoeff=-0.0640;MQ=65.46;MQ0=1;MQRankSum=-2.316;QD=127.04;ReadPosRankSum=1.887;VQSLOD=3.2315;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:11:21.03:1301,21,0	1/1:6,0:6:12.04:823,12,0	0/1:2,0:4:25.28:276,0,25	0/1:3,1:7:1.65:684,0,2	1/1:10,0:10:24.08:1130,24,0	1/1:10,0:10:25.47:1376,25,0	1/1:9,0:9:18.06:1174,18,0	1/1:11,0:11:33.10:1728,33,0	1/1:15,0:15:33.11:1757,33,0	1/1:3,0:3:6.23:272,6,0	1/1:5,0:5:9.03:507,9,0	1/1:9,0:9:9.03:721,9,0	1/1:3,0:3:3.01:260,3,0	1/1:14,0:14:33.11:2008,33,0	1/1:12,0:12:30.09:1785,30,0	1/1:12,0:12:27.09:1792,27,0	1/1:5,0:5:15.02:494,15,0	./.	1/1:5,0:5:12.04:532,12,0	1/1:2,0:2:6.01:265,6,0	1/1:10,0:10:27.05:1053,27,0	1/1:1,0:1:3.01:281,3,0	1/1:10,0:10:24.97:1777,25,0	1/1:10,0:10:30.10:1799,30,0	1/1:4,0:4:12.04:533,12,0	1/1:9,0:9:26.57:1556,27,0	1/1:11,0:10:17.65:689,18,0	1/1:3,0:3:9.03:231,9,0
chr10	33375942	.	T	TTA	4308.75	PASS	AB=1.000;AC=44;AF=0.917;AN=48;BaseQRankSum=-2.021;DP=190;FS=1.883;HRun=0;HaplotypeScore=89.0717;InbreedingCoeff=0.4511;MQ=70.09;MQ0=0;MQRankSum=-1.612;QD=23.94;ReadPosRankSum=2.964;VQSLOD=5.7365;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,5:7:7.27:104,7,0	1/1:2,6:8:21.06:328,21,0	0/0:7,0:5:7.97:0,8,55	0/1:12,0:8:0.84:1,0,28	1/1:5,0:10:11.84:90,12,0	1/1:1,0:4:8.95:67,9,0	0/1:3,0:3:0.08:0,0,0	1/1:6,4:10:18.05:266,18,0	./.	1/1:1,5:6:15.05:253,15,0	1/1:7,6:13:11.99:201,12,0	./.	1/1:0,7:7:14.88:252,15,0	./.	1/1:4,1:5:8.56:133,9,0	1/1:0,3:3:3.01:50,3,0	1/1:0,3:10:20.93:172,21,0	1/1:1,3:4:9.03:152,9,0	1/1:1,6:7:15.05:252,15,0	1/1:4,4:8:12.03:202,12,0	1/1:0,2:2:3.01:51,3,0	1/1:5,1:6:3.01:50,3,0	1/1:6,3:9:8.67:150,9,0	./.	1/1:9,12:21:34.56:588,35,0	1/1:0,9:9:24.08:404,24,0	1/1:1,5:6:15.05:240,15,0	1/1:2,6:8:18.06:303,18,0
chr10	33376093	.	A	AAC	2701.90	PASS	AB=0.760;AC=45;AF=0.865;AN=52;BaseQRankSum=-0.655;DP=515;FS=0.000;HRun=0;HaplotypeScore=82.0094;InbreedingCoeff=-0.2024;MQ=54.72;MQ0=24;MQRankSum=-1.193;QD=5.71;ReadPosRankSum=0.371;VQSLOD=2.8608;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:14:5.96:45,6,0	1/1:6,0:7:6.01:63,6,0	1/1:41,0:13:0.89:2,1,0	./.	1/1:18,0:18:5.74:54,6,0	1/1:15,0:15:14.67:119,15,0	1/1:11,0:20:2.80:13,3,0	1/1:31,0:30:12.40:126,12,0	1/1:8,4:12:3.01:45,3,0	0/1:12,5:17:9.80:198,0,10	1/1:12,2:14:9.01:114,9,0	1/1:8,0:7:2.51:25,3,0	1/1:14,2:16:9:111,9,0	1/1:9,2:11:3.01:45,3,0	1/1:11,8:18:9.03:135,9,0	0/1:13,1:14:26.93:39,0,27	1/1:14,0:22:6:52,6,0	0/1:14,11:25:1.98:372,0,2	1/1:17,5:20:17.99:197,18,0	1/1:12,2:14:3.01:45,3,0	0/1:16,10:26:72.40:264,0,72	0/1:7,7:13:38.93:223,0,39	1/1:21,0:20:2.99:26,3,0	1/1:16,0:15:2.98:23,3,0	0/1:8,7:16:55.97:192,0,56	0/1:14,3:17:21.54:117,0,22	1/1:9,9:18:11.57:179,12,0	./.
chr10	33376131	.	C	CACA	741.52	PASS	AB=0.996;AC=17;AF=0.304;AN=56;BaseQRankSum=10.602;DP=520;FS=32.372;HRun=0;HaplotypeScore=103.5854;InbreedingCoeff=-0.3005;MQ=65.55;MQ0=21;MQRankSum=-2.492;QD=2.66;ReadPosRankSum=0.728;VQSLOD=0.3539;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:5,17:21:11.83:145,12,0	0/1:3,0:3:27.83:51,0,28	0/0:38,0:18:50.82:0,51,589	0/0:50,0:20:47.38:0,47,521	0/1:17,0:18:77.12:77,0,126	0/1:19,0:19:99:105,0,300	0/1:17,0:17:5.72:6,0,233	0/1:36,0:34:66.55:67,0,683	0/0:12,0:12:12.65:0,13,199	0/1:16,0:16:86.53:87,0,162	0/1:11,0:11:1.98:2,0,72	0/1:11,0:10:57.67:58,0,130	0/0:15,0:15:18.42:0,18,351	0/0:13,0:13:27.61:0,28,397	0/0:12,0:11:1.90:0,2,198	0/0:15,0:15:21.72:0,22,327	0/1:22,0:20:94.85:95,0,118	0/1:23,0:22:16.05:16,0,316	0/1:20,0:19:23.14:23,0,408	0/0:7,0:7:4.09:0,4,103	0/0:40,0:39:15.91:0,16,840	0/1:15,0:14:56.81:57,0,186	0/1:15,0:14:49.43:49,0,95	0/1:17,0:16:24.69:25,0,135	0/1:14,0:14:36.29:36,0,219	0/0:15,0:15:19.57:0,20,409	0/0:22,0:22:8.48:0,8,337	0/0:2,0:2:2.96:0,3,36
chr10	33376852	.	TA	T	7346.90	PASS	AC=30;AF=0.556;AN=54;BaseQRankSum=4.011;DP=440;FS=3.352;HRun=2;HaplotypeScore=72.8076;InbreedingCoeff=0.9938;MQ=64.26;MQ0=0;MQRankSum=-0.391;QD=35.49;ReadPosRankSum=0.509;VQSLOD=5.3049;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,99,1481	./.	0/0:18,0:17:51.02:0,51,677	0/0:19,0:19:47.06:0,47,697	0/0:17,0:17:51.17:0,51,764	0/0:18,0:18:36.12:0,36,539	0/0:14,0:14:36.12:0,36,538	1/1:0,14:14:42.14:545,42,0	0/0:16,0:16:39.09:0,39,556	1/1:1,18:19:57.09:705,57,0	1/1:0,16:16:45.15:584,45,0	0/0:21,0:21:54.18:0,54,808	1/1:0,13:13:24.08:311,24,0	1/1:0,12:12:33.11:428,33,0	0/0:16,0:16:42.14:0,42,628	1/1:0,13:13:36.12:467,36,0	0/0:31,0:31:87.23:0,87,1253	1/1:0,7:7:15.05:195,15,0	1/1:0,13:13:39.13:506,39,0	1/1:0,14:14:39.13:506,39,0	1/1:0,28:28:81.26:1051,81,0	1/1:0,17:17:48.16:623,48,0	0/0:13,0:13:36.12:0,36,539	0/0:16,0:16:48.16:0,48,719	1/1:0,6:6:15.05:195,15,0	1/1:1,14:15:42.14:545,42,0	1/1:0,14:14:36.12:467,36,0	1/1:0,6:6:18.04:218,18,0
chr10	33378015	.	C	CA	1070.29	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-7.950;DP=538;FS=20.343;HRun=8;HaplotypeScore=51.7582;InbreedingCoeff=0.9095;MQ=76.81;MQ0=0;MQRankSum=-0.953;QD=23.27;ReadPosRankSum=0.232;VQSLOD=2.0244;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:54.03:0,54,494	0/0:6,0:6:15.01:0,15,137	0/0:14,0:10:14.98:0,15,137	0/0:19,0:17:1.19:0,1,109	0/0:37,0:38:98.08:0,98,883	0/0:21,0:21:57.03:0,57,522	0/0:13,0:13:27.01:0,27,247	0/0:31,1:32:49.40:0,49,699	0/0:20,0:20:57:0,57,511	0/0:29,0:30:81:0,81,733	0/0:25,0:25:69.04:0,69,631	1/1:2,10:12:24.07:277,24,0	0/0:17,0:17:48.01:0,48,435	0/0:14,0:14:27:0,27,247	0/0:16,0:16:48.03:0,48,439	0/0:22,0:22:54.03:0,54,494	0/0:21,0:21:57:0,57,515	0/0:14,0:14:42.02:0,42,384	0/0:18,0:19:50.06:0,50,445	0/0:34,0:34:87.03:0,87,796	0/0:15,0:15:33:0,33,302	0/0:22,0:22:51.02:0,51,466	1/1:1,19:20:54.16:623,54,0	1/1:3,11:14:27.08:312,27,0	0/0:7,0:7:18.01:0,18,165	0/0:20,0:20:60.03:0,60,549	0/0:24,0:24:66.01:0,66,599	0/0:10,0:10:30.02:0,30,275
chr10	33380901	.	TAGATAGATAGAA	T	1975.63	PASS	AB=0.947;AC=21;AF=0.389;AN=54;BaseQRankSum=-2.584;DP=575;FS=17.686;HRun=0;HaplotypeScore=201.9235;InbreedingCoeff=0.2470;MQ=58.39;MQ0=4;MQRankSum=-2.326;QD=6.33;ReadPosRankSum=3.238;VQSLOD=1.5588;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:18,0:17:47.11:153,0,47	0/0:5,0:5:3.90:0,4,67	0/0:26,0:15:28.98:0,29,299	0/0:18,0:12:23.99:0,24,240	0/1:19,1:20:0.77:12,0,1	0/0:22,0:22:2.66:0,3,7	1/1:11,0:11:5.01:51,5,0	1/1:34,0:34:76.75:537,77,0	1/1:6,12:18:1.90:18,2,0	1/1:27,0:27:63.56:430,64,0	0/0:31,0:31:11.05:0,11,211	0/0:21,0:21:52.94:0,53,1674	0/1:32,0:32:9.97:10,0,119	0/0:22,0:22:1.77:0,2,4	0/1:18,0:18:99:217,0,507	0/1:7,20:27:0.21:0,0,0	1/1:10,1:11:14.84:113,15,0	1/1:5,1:6:11.91:87,12,0	0/1:12,0:11:33.03:33,0,156	0/0:22,0:22:27.09:0,27,957	0/0:24,0:24:9.03:0,9,174	0/1:21,0:21:48.81:49,0,1156	0/0:17,0:17:33.10:0,33,1201	0/0:9,0:9:24.04:0,24,605	0/0:33,0:33:2.66:0,3,6	0/1:19,0:19:81.82:82,0,618	0/1:37,0:37:99:352,0,891	./.
chr10	33380905	.	TAGATAGAA	T	3121.36	PASS	AB=0.939;AC=21;AF=0.389;AN=54;BaseQRankSum=-3.356;DP=555;FS=19.274;HRun=0;HaplotypeScore=166.1752;InbreedingCoeff=0.2438;MQ=58.77;MQ0=4;MQRankSum=-1.290;QD=10.27;ReadPosRankSum=3.051;VQSLOD=0.8772;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:18,0:17:21.66:154,0,22	0/0:6,0:6:3.49:0,3,15	0/0:22,0:15:28.98:0,29,299	0/0:14,0:11:23.99:0,24,240	0/1:3,19:22:1.50:12,0,2	0/0:0,22:22:2.66:0,3,8	1/1:9,0:9:4.78:48,5,0	1/1:33,0:33:77.30:554,77,0	1/1:16,0:16:1.92:18,2,0	1/1:1,26:27:77.90:1248,78,0	0/0:28,2:30:10.77:0,11,63	0/0:21,0:21:52.94:0,53,1331	0/1:31,0:31:10.45:10,0,16	0/0:2,20:22:1.77:0,2,4	0/1:19,0:19:99:261,0,245	0/1:26,0:26:0:0,0,0	1/1:11,0:10:14.84:113,15,0	1/1:5,0:5:11.91:87,12,0	0/1:10,1:10:16.15:218,0,16	0/0:22,0:22:26.86:0,27,634	0/0:24,0:24:8.39:0,8,38	0/1:21,0:21:77.10:77,0,679	0/0:13,0:13:33.10:0,33,938	0/0:10,0:10:24.04:0,24,484	0/0:6,25:31:2.66:0,3,7	0/1:19,0:19:91.50:91,0,247	0/1:36,0:36:99:397,0,575	./.
chr10	33380909	.	TAGAA	T	4071.50	PASS	AB=0.834;AC=30;AF=0.556;AN=54;BaseQRankSum=-1.219;DP=520;FS=5.445;HRun=0;HaplotypeScore=132.6784;InbreedingCoeff=0.3044;MQ=59.07;MQ0=3;MQRankSum=1.368;QD=11.06;ReadPosRankSum=2.918;VQSLOD=2.9174;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:18:7.76:183,8,0	1/1:0,6:6:1.73:54,2,0	0/0:18,0:13:28.98:0,29,299	0/0:11,0:8:23.99:0,24,240	0/1:22,0:22:0.70:12,0,1	0/0:22,0:22:2.66:0,3,7	1/1:9,0:10:4.98:46,5,0	1/1:28,0:28:77.38:560,77,0	1/1:14,0:14:1.98:18,2,0	1/1:27,0:27:77.86:732,78,0	0/1:2,26:28:10.51:159,0,11	0/0:18,0:18:52.94:0,53,973	1/1:4,26:30:8.98:132,9,0	0/0:20,0:20:1.77:0,2,4	0/1:20,0:20:51.72:312,0,52	0/1:21,0:21:0:0,0,0	1/1:12,0:11:17.83:136,18,0	1/1:4,0:4:11.91:87,12,0	1/1:4,7:10:24.04:318,24,0	0/1:9,13:22:32.11:32,0,279	1/1:0,22:22:9.03:170,9,0	0/1:17,1:18:99:182,0,300	0/0:13,0:13:39.09:0,39,678	0/0:10,0:10:24.04:0,24,370	0/0:27,0:27:2.66:0,3,6	0/1:5,14:19:63.50:445,0,64	0/1:35,0:35:99:493,0,203	./.
chr10	33382025	.	C	CCTCT	3160.98	PASS	AB=0.803;AC=47;AF=0.904;AN=52;BaseQRankSum=-0.929;DP=569;FS=8.622;HRun=0;HaplotypeScore=131.9157;InbreedingCoeff=-0.0781;MQ=61.96;MQ0=6;MQRankSum=-1.695;QD=5.89;ReadPosRankSum=-0.500;VQSLOD=2.1180;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:27:3.01:50,3,0	1/1:6,0:6:3.01:37,3,0	./.	./.	1/1:21,1:22:2:69,2,0	1/1:23,0:23:18.04:291,18,0	1/1:20,0:19:9.01:127,9,0	1/1:30,0:30:3.01:40,3,0	1/1:17,0:16:2.99:52,3,0	1/1:20,0:20:14.74:216,15,0	1/1:17,0:23:2.01:69,2,0	0/1:16,0:16:34.35:115,0,34	1/1:20,0:21:8.38:467,8,0	1/1:11,5:16:3.01:70,3,0	1/1:23,0:23:6.01:77,6,0	1/1:19,6:25:8.60:153,9,0	1/1:12,0:12:6.49:94,6,0	1/1:5,0:9:11.77:151,12,0	1/1:18,0:17:6.49:76,6,0	1/1:26,5:36:2.97:70,3,0	1/1:9,0:17:5.75:82,6,0	0/1:12,8:21:34.60:199,0,35	0/1:22,0:30:6.76:7,0,18	0/1:14,0:22:0.42:0,0,90	0/1:14,1:21:16.49:83,0,16	1/1:17,6:29:32.34:473,32,0	1/1:6,2:15:8.33:152,8,0	1/1:11,0:10:4.83:57,5,0
chr10	33382030	.	C	CTCTCTCTCTCTA	960.86	PASS	AB=0.974;AC=15;AF=0.268;AN=56;BaseQRankSum=6.184;DP=599;FS=8.301;HRun=0;HaplotypeScore=199.0562;InbreedingCoeff=-0.3651;MQ=59.24;MQ0=14;MQRankSum=-1.242;QD=3.37;ReadPosRankSum=-1.865;VQSLOD=1.7455;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:11,17:30:14.27:173,0,14	0/1:6,0:6:13.86:14,0,41	0/0:22,0:3:1.25:0,1,3	0/0:30,0:6:5.38:0,5,42	0/0:24,0:24:28.74:0,29,223	0/1:26,0:26:99:178,0,116	0/1:21,0:20:68.21:68,0,127	0/0:31,0:31:49.16:0,49,539	0/1:17,0:16:3.66:4,0,145	0/1:19,0:19:55.63:56,0,228	0/1:25,0:24:18.88:19,0,152	0/1:17,0:17:25.88:26,0,203	0/1:20,0:20:42.10:199,0,42	0/0:17,0:16:11.44:0,11,85	0/1:21,0:21:84.31:124,0,84	0/0:23,0:22:32.81:0,33,273	0/1:12,0:12:52.42:72,0,52	0/1:10,0:10:62.42:62,0,135	0/1:17,0:16:19.65:20,0,154	0/0:34,0:34:41.55:0,42,328	0/0:17,0:17:0.57:0,1,153	0/0:24,0:24:44.15:0,44,396	0/0:30,0:30:47.58:0,48,436	0/0:23,0:22:38.99:0,39,554	0/0:20,0:19:29.69:0,30,350	0/1:27,0:27:87.56:88,0,256	0/0:19,0:19:4.61:0,5,184	0/1:15,0:11:6.90:7,0,103
chr10	33383155	.	A	AACACAC	11309.85	PASS	AB=0.763;AC=45;AF=0.804;AN=56;BaseQRankSum=-6.142;DP=709;FS=0.000;HRun=0;HaplotypeScore=183.2433;InbreedingCoeff=0.5527;MQ=58.36;MQ0=5;MQRankSum=-7.380;QD=19.10;ReadPosRankSum=-5.230;VQSLOD=3.0117;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:18,11:32:5.77:151,6,0	1/1:4,2:8:3.01:97,3,0	0/1:24,0:12:29.06:29,0,138	0/0:27,0:11:2.97:0,3,20	0/1:17,0:29:0:0,0,1	1/1:12,1:25:12.02:260,12,0	1/1:29,0:29:8.89:185,9,0	1/1:22,0:21:30.07:691,30,0	1/1:13,0:21:19.45:552,19,0	1/1:22,12:38:65.94:1645,66,0	1/1:20,4:25:29.31:480,29,0	0/0:9,0:22:10.94:0,11,26	1/1:10,7:19:20.86:551,21,0	1/1:12,11:27:33.11:1010,33,0	0/0:17,0:36:19.66:0,20,207	1/1:8,20:30:23.69:679,24,0	1/1:11,0:22:12.04:319,12,0	1/1:2,4:8:13.60:252,14,0	1/1:19,1:19:12.04:259,12,0	1/1:10,18:31:21.54:626,22,0	1/1:19,11:33:2.92:98,3,0	1/1:15,14:33:35.81:944,36,0	0/0:15,0:32:11.87:0,12,79	0/1:9,0:32:39.85:40,0,69	1/1:10,14:25:11.81:391,12,0	1/1:12,10:25:36.11:759,36,0	1/1:17,7:24:33.20:1050,33,0	1/1:5,0:4:12.04:244,12,0
chr10	33385962	.	G	GCACT	54697	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-9.457;DP=775;FS=4.355;HRun=0;HaplotypeScore=100.5280;InbreedingCoeff=0.9997;MQ=78.48;MQ0=0;MQRankSum=-11.568;QD=75.55;ReadPosRankSum=7.209;VQSLOD=6.9000;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,40:48:99:3283,114,0	1/1:2,9:13:30.10:839,30,0	0/0:20,0:20:60.17:0,60,1098	0/0:31,0:30:84.28:0,84,1617	1/1:1,18:19:48.16:1347,48,0	1/1:7,17:26:60.21:1651,60,0	1/1:1,23:24:69.24:1996,69,0	1/1:8,21:33:99:2474,99,0	1/1:3,24:31:84.29:2394,84,0	1/1:2,18:23:66.20:1768,66,0	1/1:0,21:23:63.22:1823,63,0	1/1:3,22:29:72.25:2038,72,0	1/1:2,36:42:99:2925,102,0	1/1:0,29:30:81.28:2344,81,0	1/1:1,36:40:99:3127,108,0	1/1:0,32:34:96.33:2781,96,0	1/1:1,21:23:57.20:1650,57,0	1/1:1,14:16:42.14:1207,42,0	1/1:2,12:15:45.13:1214,45,0	1/1:2,30:33:93.32:2691,93,0	1/1:1,39:42:99:2937,102,0	1/1:2,24:28:78.27:2222,78,0	1/1:1,28:29:81.27:2338,81,0	1/1:0,21:22:63.22:1824,63,0	1/1:3,21:24:66.23:1878,66,0	1/1:3,25:29:90.31:2502,90,0	1/1:2,26:30:78.27:2226,78,0	1/1:0,14:14:42.14:1217,42,0
chr10	33386587	.	CTT	C	13917	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=12.978;DP=543;FS=3.723;HRun=2;HaplotypeScore=69.6160;InbreedingCoeff=0.9997;MQ=89.68;MQ0=0;MQRankSum=-5.255;QD=44.18;ReadPosRankSum=3.023;VQSLOD=4.9060;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:42.12:0,42,804	1/1:0,13:13:39.13:624,39,0	0/0:20,0:20:60.20:0,60,1159	0/0:21,0:21:53:0,53,1016	0/0:30,0:30:90.20:0,90,1686	0/0:16,0:16:48.16:0,48,951	0/0:17,0:17:51.13:0,51,891	1/1:0,28:28:81:1243,81,0	0/0:15,0:15:45.15:0,45,895	1/1:0,20:20:60.19:933,60,0	1/1:0,25:25:69.19:1093,69,0	0/0:21,0:21:63.21:0,63,1226	1/1:0,24:24:63.11:1005,63,0	1/1:0,18:18:51.17:831,51,0	0/0:23,0:23:69.24:0,69,1374	1/1:0,18:18:48.16:782,48,0	0/0:21,0:21:63.22:0,63,1279	1/1:0,14:14:39.13:634,39,0	1/1:0,18:18:51.17:795,51,0	1/1:0,30:31:84.29:1364,84,0	1/1:0,14:14:36.12:586,36,0	1/1:0,11:11:27.09:439,27,0	0/0:16,0:16:48.15:0,48,929	0/0:14,0:14:42.14:0,42,816	1/1:0,18:18:45.15:733,45,0	1/1:0,19:19:57.18:905,57,0	1/1:0,34:34:90.31:1460,90,0	1/1:0,10:10:30.10:488,30,0
chr10	33386942	.	A	ATCTCAAC	8413.47	PASS	AB=0.566;AC=9;AF=0.161;AN=56;BaseQRankSum=-3.554;DP=643;FS=6.267;HRun=0;HaplotypeScore=141.8660;InbreedingCoeff=0.8685;MQ=81.16;MQ0=0;MQRankSum=-13.764;QD=63.26;ReadPosRankSum=-3.478;VQSLOD=4.0087;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:33.11:0,33,816	0/0:15,0:15:45.15:0,45,1116	0/0:17,0:17:27.09:0,27,609	0/0:21,0:21:39.09:0,39,882	1/1:16,28:45:72.24:2213,72,0	1/1:12,13:28:48.16:1676,48,0	1/1:8,14:22:54.18:1824,54,0	0/0:39,0:39:96.29:0,96,2105	0/1:7,21:30:8.16:2120,0,8	0/0:21,0:21:60.20:0,60,1403	0/0:36,0:36:93.32:0,93,2248	0/0:22,0:22:57.18:0,57,1363	0/0:18,0:18:51.18:0,51,1264	0/0:15,0:15:45.13:0,45,1017	0/0:28,0:28:72.25:0,72,1778	0/0:22,0:22:66.21:0,66,1563	1/1:3,3:8:15.05:580,15,0	0/0:11,0:11:33.10:0,33,734	0/0:23,0:23:60.19:0,60,1333	0/0:34,0:34:87.28:0,87,2079	0/0:21,0:21:60.21:0,60,1461	0/0:25,0:25:72.23:0,72,1722	0/0:24,0:24:72.25:0,72,1785	0/0:17,0:17:48.15:0,48,1139	0/0:27,0:27:75.26:0,75,1778	0/0:22,0:22:60.20:0,60,1403	0/0:35,0:35:93.30:0,93,2247	0/0:3,0:3:9.03:0,9,166
chr10	33390314	.	A	AT	24851.31	PASS	AB=0.708;AC=45;AF=0.804;AN=56;BaseQRankSum=-13.304;DP=845;FS=5.865;HRun=3;HaplotypeScore=86.6579;InbreedingCoeff=0.8867;MQ=79.39;MQ0=0;MQRankSum=-4.620;QD=35.35;ReadPosRankSum=2.533;VQSLOD=5.4395;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:47,33:80:99:1137,0,1097	1/1:0,13:13:36.12:504,36,0	0/0:30,0:31:82.12:0,82,957	0/0:21,0:21:50.93:0,51,560	1/1:3,23:26:66.22:922,66,0	1/1:0,21:21:60.20:839,60,0	1/1:1,18:19:54.18:756,54,0	1/1:2,32:34:96.28:1322,96,0	1/1:2,20:22:60.20:839,60,0	1/1:0,29:28:87.29:1218,87,0	1/1:1,23:24:59.76:812,60,0	0/0:28,0:28:81.22:0,81,948	1/1:2,37:39:75.37:1477,75,0	1/1:0,23:23:66.22:924,66,0	1/1:2,31:33:87.29:1218,87,0	1/1:2,27:28:78.26:1092,78,0	1/1:3,45:48:99:1657,120,0	1/1:0,15:15:39.13:546,39,0	1/1:2,27:29:84.26:1142,84,0	1/1:1,28:29:81.27:1134,81,0	1/1:1,32:33:90.30:1260,90,0	1/1:0,29:29:84.28:1175,84,0	0/0:26,0:26:78.24:0,78,935	0/0:36,0:36:99:0,105,1260	1/1:0,31:31:93.31:1302,93,0	1/1:2,34:36:99:1392,102,0	1/1:3,46:49:99:1761,126,0	1/1:0,12:12:30.10:420,30,0
chr10	33390347	.	TAGTC	T	4121.56	PASS	AB=0.756;AC=9;AF=0.161;AN=56;BaseQRankSum=6.065;DP=855;FS=1.418;HRun=0;HaplotypeScore=194.9650;InbreedingCoeff=0.8675;MQ=84.75;MQ0=0;MQRankSum=-10.335;QD=32.45;ReadPosRankSum=-0.142;VQSLOD=3.6824;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:86,0:86:99:0,244,6300	0/0:13,0:13:39.13:0,39,986	0/0:23,0:23:60.66:0,61,1367	0/0:32,0:33:60.25:0,60,1941	1/1:3,19:22:32.88:588,33,0	1/1:2,27:29:66.11:1174,66,0	1/1:4,15:19:45.14:821,45,0	0/0:34,0:34:99:0,99,2666	1/1:1,22:23:57.18:1048,57,0	0/0:33,0:33:93.32:0,93,2501	0/0:25,0:25:69.23:0,69,1837	0/0:26,0:26:75.24:0,75,1895	0/0:35,0:35:96.33:0,96,2530	0/0:23,0:23:69.24:0,69,1858	0/0:33,0:33:93.30:0,93,2432	0/0:28,0:28:84.29:0,84,2191	0/1:23,11:34:99:490,0,1178	0/0:24,0:24:66.23:0,66,1763	0/0:33,0:33:90.31:0,90,2320	0/0:27,0:27:75.26:0,75,1975	0/0:40,0:40:99:0,114,3054	0/0:26,0:26:72.25:0,72,1879	0/0:22,0:22:63.22:0,63,1665	0/0:32,0:32:90.27:0,90,2315	0/0:31,0:31:81.28:0,81,2149	0/0:39,0:39:99:0,117,3020	0/0:50,0:49:99:0,148,3794	0/0:12,0:12:36.12:0,36,950
chr10	33390910	.	A	ATTGGTTGG	1946.42	PASS	AB=0.714;AC=19;AF=0.365;AN=52;BaseQRankSum=5.350;DP=779;FS=0.000;HRun=0;HaplotypeScore=175.1927;InbreedingCoeff=0.8628;MQ=57.80;MQ0=15;MQRankSum=-0.533;QD=6.40;ReadPosRankSum=-0.643;VQSLOD=2.5327;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:51:41.87:336,42,0	0/0:14,0:14:17.98:0,18,329	./.	./.	1/1:21,0:32:21.31:155,21,0	1/1:11,0:25:5.99:49,6,0	1/1:20,0:19:19.51:150,20,0	1/1:29,0:27:10.93:65,11,0	1/1:15,0:27:26.63:206,27,0	0/0:27,0:26:33.09:0,33,600	0/0:23,0:23:39.13:0,39,906	1/1:17,12:31:2.46:113,2,0	0/0:29,0:29:36:0,36,579	0/0:26,0:28:42.13:0,42,891	0/0:8,0:34:32.90:0,33,562	0/0:25,0:25:51.17:0,51,1177	0/1:18,0:30:3.59:82,0,4	0/0:27,0:26:42.06:0,42,767	0/0:26,0:26:30.09:0,30,665	0/0:33,0:33:57.08:0,57,1015	0/0:37,0:37:45.14:0,45,955	0/0:24,0:25:36.10:0,36,702	1/1:19,11:29:11.76:485,12,0	1/1:27,0:27:21.01:501,21,0	0/0:17,0:33:25.44:0,25,443	0/0:26,0:25:39.12:0,39,780	0/0:16,0:16:36.07:0,36,708	0/0:4,0:4:6.02:0,6,122
chr10	33392514	.	CT	C	6569.78	PASS	AB=0.552;AC=49;AF=0.875;AN=56;BaseQRankSum=-2.654;DP=490;FS=7.665;HRun=12;HaplotypeScore=58.1941;InbreedingCoeff=0.8546;MQ=71.60;MQ0=2;MQRankSum=0.123;QD=15.00;ReadPosRankSum=4.660;VQSLOD=5.3479;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:16,1:18:27.68:0,28,437	1/1:0,11:11:29.89:232,30,0	0/0:17,1:12:17.46:0,17,140	0/0:16,0:13:19.72:0,20,169	1/1:6,16:22:43.90:341,44,0	1/1:1,13:14:26.85:204,27,0	1/1:4,13:17:28.38:268,28,0	1/1:8,16:24:18.98:283,19,0	1/1:2,15:17:41.83:325,42,0	1/1:4,16:20:44.78:345,45,0	1/1:6,18:26:21.41:330,21,0	1/1:3,13:16:35.67:269,36,0	1/1:0,15:16:40.88:308,41,0	0/1:3,13:16:3.55:159,0,4	1/1:1,0:26:46.85:135,47,0	1/1:3,14:18:37.89:284,38,0	1/1:2,13:15:29.88:232,30,0	1/1:1,17:18:38.85:302,39,0	1/1:4,5:11:19.01:128,19,0	1/1:3,18:21:43.91:342,44,0	1/1:3,8:11:20.91:163,21,0	1/1:2,12:15:37.89:284,38,0	1/1:2,14:16:32.85:255,33,0	1/1:2,13:15:35.85:279,36,0	1/1:4,19:25:51.89:383,52,0	1/1:2,14:17:45.12:334,45,0	1/1:5,19:24:11.38:270,11,0	1/1:0,7:7:14.94:116,15,0
chr10	33393009	.	TACACAC	T	2104.32	PASS	AB=0.882;AC=17;AF=0.327;AN=52;BaseQRankSum=2.642;DP=481;FS=1.648;HRun=0;HaplotypeScore=105.4358;InbreedingCoeff=0.7998;MQ=59.69;MQ0=3;MQRankSum=-6.717;QD=13.15;ReadPosRankSum=-0.292;VQSLOD=2.7945;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:22:20.24:0,20,240	0/0:4,0:5:5.64:0,6,98	./.	./.	1/1:9,12:20:17.81:263,18,0	1/1:12,13:25:18.06:342,18,0	1/1:13,6:18:9.03:160,9,0	0/0:19,0:19:10.59:0,11,161	1/1:11,7:18:15.05:300,15,0	0/0:13,0:18:24.05:0,24,319	0/0:14,0:22:22.88:0,23,248	1/1:9,5:14:12.04:244,12,0	0/0:14,0:16:24.06:0,24,551	0/0:9,0:15:14.92:0,15,187	1/1:8,15:24:27.09:523,27,0	0/0:10,0:18:27.03:0,27,302	0/1:13,2:15:35.18:52,0,35	0/0:12,0:14:20.84:0,21,219	0/0:16,0:16:6.49:0,6,109	0/0:16,0:20:12.04:0,12,184	0/0:14,0:17:24.05:0,24,379	0/0:22,0:23:33.11:0,33,916	1/1:5,4:8:9.03:183,9,0	1/1:10,4:14:12.04:228,12,0	0/0:14,0:18:17.93:0,18,185	0/0:15,0:17:16.59:0,17,240	0/0:11,0:19:6.02:0,6,77	0/0:2,0:5:10.58:0,11,119
chr10	33393513	.	T	TA	2859.42	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-1.919;DP=593;FS=2.401;HRun=10;HaplotypeScore=74.4335;InbreedingCoeff=0.9869;MQ=72.10;MQ0=0;MQRankSum=-2.530;QD=21.50;ReadPosRankSum=0.401;VQSLOD=4.5622;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:80.55:0,81,644	0/0:9,0:9:17.96:0,18,148	0/0:20,0:19:38.57:0,39,298	0/0:12,0:13:22.24:0,22,177	1/1:11,22:33:66.12:687,66,0	1/1:7,9:16:30.07:313,30,0	1/1:4,10:14:23.22:282,23,0	0/0:26,0:28:63.79:0,64,535	1/1:5,16:21:29.49:517,29,0	0/0:23,0:24:45.24:0,45,372	0/0:19,0:20:58.95:0,59,469	0/0:18,0:18:47.91:0,48,388	0/0:23,0:24:67.96:0,68,548	0/0:22,0:22:59.92:0,60,492	1/1:2,33:34:81.20:864,81,0	0/0:24,0:26:36.86:0,37,464	1/1:1,12:13:36.09:384,36,0	0/0:6,0:6:14.94:0,15,118	0/0:12,0:13:31.97:0,32,250	0/0:25,0:25:62.83:0,63,508	0/0:32,0:32:83.86:0,84,689	0/0:22,0:23:49.96:0,50,400	0/0:21,1:23:23.97:0,24,392	0/0:14,0:14:35.96:0,36,296	0/0:22,0:23:61.94:0,62,495	0/0:30,0:30:62.85:0,63,515	0/0:29,1:30:45.87:0,46,578	0/0:5,0:5:11.98:0,12,98
chr10	33393558	.	G	GCAATGCTGT	9456.66	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-1.850;DP=585;FS=0.467;HRun=0;HaplotypeScore=155.7743;InbreedingCoeff=0.9568;MQ=79.40;MQ0=0;MQRankSum=-12.585;QD=91.81;ReadPosRankSum=0.746;VQSLOD=5.1816;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:90.26:0,90,2581	0/0:7,0:7:21.07:0,21,608	0/0:16,0:16:42.13:0,42,1015	0/0:18,0:18:45.14:0,45,1132	1/1:5,18:28:54.17:2488,54,0	1/1:2,13:21:45.15:2175,45,0	1/1:7,11:22:45.11:1868,45,0	0/0:29,0:29:84.27:0,84,2385	1/1:3,13:23:42.14:2029,42,0	0/0:19,0:19:54.19:0,54,1675	0/0:28,0:28:81.28:0,81,2416	0/0:28,0:28:81.26:0,81,2335	0/0:19,0:19:48.16:0,48,1439	0/0:22,0:22:66.21:0,66,1970	0/0:33,0:33:90.26:0,90,2542	0/0:23,0:23:66.20:0,66,1894	1/1:4,4:8:24.06:897,24,0	0/0:7,0:7:18.06:0,18,511	0/0:16,0:16:45.13:0,45,1211	0/0:22,0:22:63.19:0,63,1823	0/0:33,0:33:93.30:0,93,2816	0/0:21,0:21:60.21:0,60,1861	0/0:24,0:24:72.19:0,72,1939	0/0:8,0:8:24.08:0,24,702	0/0:22,0:22:66.21:0,66,1875	0/0:22,0:22:57.20:0,57,1618	0/0:34,0:33:99:0,99,2833	0/0:1,0:1:3.01:0,3,93
chr10	33395351	.	GGCTGGT	G	1779.31	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.982;DP=639;FS=2.458;HRun=0;HaplotypeScore=132.2805;InbreedingCoeff=0.8017;MQ=82.00;MQ0=0;MQRankSum=-7.181;QD=59.31;ReadPosRankSum=0.935;VQSLOD=3.9258;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,111,3653	0/0:10,0:10:30.10:0,30,1021	0/0:15,0:15:5.89:0,6,714	0/0:23,0:23:4.52:0,5,802	0/0:25,0:25:72.23:0,72,2430	0/0:15,0:15:45.14:0,45,1531	0/0:19,0:19:57.18:0,57,1964	0/0:35,0:35:96.32:0,96,3232	0/0:25,0:25:75.26:0,75,2641	0/0:28,0:28:81.28:0,81,2718	0/0:23,0:23:69.24:0,69,2305	0/0:25,0:25:75.26:0,75,2692	0/0:25,0:25:72.25:0,72,2557	0/0:28,0:28:78.27:0,78,2795	1/1:1,29:30:78.27:1874,78,0	0/0:25,0:25:75.24:0,75,2562	0/0:32,0:32:87.28:0,87,2952	0/0:14,0:14:42.10:0,42,1289	0/0:25,0:25:69.24:0,69,2390	0/0:19,0:19:54.19:0,54,1900	0/0:25,0:25:75.26:0,75,2696	0/0:19,0:19:57.20:0,57,1947	0/0:22,0:21:66.23:0,66,2265	0/0:19,0:19:51.18:0,51,1834	0/0:16,0:16:48.16:0,48,1656	0/0:25,0:25:69.24:0,69,2447	0/0:23,0:23:69.22:0,69,2304	0/0:10,0:10:30.10:0,30,1082
chr10	33396293	.	GCTTA	G	5122.72	PASS	AB=1.000;AC=34;AF=0.654;AN=52;BaseQRankSum=-6.820;DP=549;FS=13.000;HRun=0;HaplotypeScore=100.5444;InbreedingCoeff=0.7249;MQ=62.48;MQ0=4;MQRankSum=2.691;QD=13.85;ReadPosRankSum=-2.113;VQSLOD=3.2475;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:41.98:0,42,683	1/1:7,7:14:11.96:187,12,0	./.	./.	0/0:23,0:23:5.10:0,5,366	0/0:22,0:22:20.16:0,20,628	0/1:12,0:12:32.45:32,0,127	1/1:27,0:25:9.01:83,9,0	0/0:17,0:17:8.11:0,8,411	1/1:9,14:23:42.06:524,42,0	1/1:9,16:25:38.50:398,39,0	0/0:10,0:17:15.05:0,15,280	1/1:7,15:22:30.10:468,30,0	1/1:7,7:14:12.04:187,12,0	0/0:1,0:21:12.04:0,12,175	1/1:9,6:15:12.04:187,12,0	0/1:25,0:25:91.74:92,0,393	1/1:9,9:18:6.02:94,6,0	1/1:9,10:16:30.06:401,30,0	1/1:10,12:22:35.93:476,36,0	1/1:8,16:24:18.06:281,18,0	1/1:8,8:16:23.33:237,23,0	0/0:14,0:29:22.13:0,22,269	0/0:5,0:9:12.03:0,12,182	1/1:8,12:20:21.07:328,21,0	1/1:12,15:27:45.08:587,45,0	1/1:15,16:31:30.10:468,30,0	1/1:12,4:16:6.02:94,6,0
chr10	33398788	.	AAC	A	1421.45	PASS	AB=0.916;AC=27;AF=0.614;AN=44;BaseQRankSum=1.981;DP=514;FS=0.859;HRun=0;HaplotypeScore=91.2743;InbreedingCoeff=0.2036;MQ=64.27;MQ0=19;MQRankSum=1.006;QD=5.15;ReadPosRankSum=0.101;VQSLOD=2.8656;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,2:35:8.22:0,8,451	1/1:6,2:8:3.01:32,3,0	./.	./.	0/1:19,0:22:0.01:0,0,0	./.	./.	0/0:22,0:22:5.43:0,5,30	0/1:10,0:14:21.35:30,0,21	0/1:14,0:13:6.18:74,0,6	1/1:11,3:14:11.74:102,12,0	0/0:7,0:7:2.60:0,3,10	1/1:13,0:13:5.85:46,6,0	1/1:11,3:12:14.95:145,15,0	./.	1/1:4,1:6:8.85:72,9,0	0/1:31,0:36:38.89:50,0,39	0/1:16,1:16:6.87:91,0,7	1/1:9,1:10:5.98:53,6,0	1/1:18,3:22:31.87:272,32,0	0/1:24,1:26:60.30:60,0,85	1/1:8,3:12:23.63:218,24,0	0/0:16,0:16:8.06:0,8,70	0/0:28,0:27:5.99:0,6,48	1/1:22,2:26:28.47:235,28,0	0/1:11,0:11:48.76:70,0,49	1/1:8,0:9:2.84:14,3,0	./.
chr10	33398812	.	C	CACACAT	240.02	PASS	AB=0.564;AC=3;AF=0.056;AN=54;BaseQRankSum=1.020;DP=621;FS=4.456;HRun=0;HaplotypeScore=186.2802;InbreedingCoeff=0.1761;MQ=47.75;MQ0=30;MQRankSum=1.195;QD=3.69;ReadPosRankSum=3.444;VQSLOD=1.9830;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:38:67.94:0,68,958	0/0:5,0:5:11.99:0,12,122	0/0:21,0:2:5.87:0,6,41	0/0:34,0:8:14.94:0,15,128	0/0:29,0:28:40.70:0,41,271	0/0:14,0:14:14.82:0,15,104	0/0:25,0:23:20.66:0,21,124	0/0:32,0:31:70.51:0,71,636	0/0:17,0:17:29.82:0,30,267	0/0:28,0:25:68.62:0,69,648	0/0:23,0:23:20.56:0,21,245	0/1:1,9:11:0.99:97,0,1	0/0:21,0:20:44.55:0,45,347	0/0:16,0:14:39.74:0,40,403	0/0:17,0:16:32.73:0,33,243	0/0:15,0:15:36.35:0,36,362	0/0:41,0:40:39.40:0,39,412	0/0:18,0:17:34.05:0,34,351	0/0:6,0:6:17.99:0,18,196	0/0:33,0:33:63.39:0,63,735	0/0:33,0:32:55.08:0,55,522	0/0:21,0:21:34.16:0,34,451	0/1:5,8:19:25.37:172,0,25	0/1:11,20:34:47.78:70,0,48	0/0:30,0:30:39.22:0,39,564	0/0:21,0:20:56.43:0,56,545	0/0:15,0:13:32.77:0,33,268	./.
chr10	33398859	.	C	CGACA	19908.64	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-8.018;DP=591;FS=8.972;HRun=0;HaplotypeScore=123.2502;InbreedingCoeff=0.9527;MQ=63.28;MQ0=0;MQRankSum=-5.934;QD=43.47;ReadPosRankSum=2.828;VQSLOD=5.4330;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:45.12:0,45,711	1/1:0,2:4:3.01:75,3,0	0/0:33,0:30:46.87:0,47,816	0/0:23,0:22:29.68:0,30,501	1/1:9,16:26:36.94:960,37,0	1/1:4,14:18:39.13:973,39,0	1/1:6,16:22:38.92:970,39,0	1/1:22,10:32:66.08:1155,66,0	1/1:3,16:19:42.14:1047,42,0	1/1:6,21:30:75.20:1694,75,0	1/1:4,17:22:39.02:964,39,0	0/0:11,0:11:15.01:0,15,224	1/1:6,13:20:21.07:523,21,0	1/1:2,11:14:24.08:599,24,0	1/1:4,16:20:48.16:1182,48,0	1/1:6,12:19:32.99:764,33,0	1/1:9,28:39:84.14:1928,84,0	1/1:2,10:13:30.10:746,30,0	1/1:4,6:10:18.05:402,18,0	1/1:6,18:26:26.91:674,27,0	1/1:7,14:21:33.10:774,33,0	1/1:5,21:27:42.14:1033,42,0	0/0:23,0:23:45.42:0,45,765	0/0:24,0:24:33.11:0,33,552	1/1:9,22:32:54.17:1256,54,0	1/1:5,11:17:42.13:861,42,0	1/1:8,13:23:42.14:1030,42,0	1/1:0,4:4:12.04:300,12,0
chr10	33399247	.	A	AT	816.40	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-5.554;DP=475;FS=3.223;HRun=0;HaplotypeScore=44.4556;InbreedingCoeff=0.9361;MQ=78.40;MQ0=1;MQRankSum=0.626;QD=40.82;ReadPosRankSum=1.359;VQSLOD=3.9965;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:48.16:0,48,671	0/0:3,0:3:9.03:0,9,126	0/0:16,0:16:36.37:0,36,570	0/0:9,0:9:21.53:0,22,273	0/0:15,0:15:45.15:0,45,629	0/0:33,0:33:99:0,99,1384	0/0:13,0:13:39.13:0,39,546	0/0:25,0:25:75.25:0,75,1047	0/0:14,0:14:42.14:0,42,587	0/0:22,0:22:66.22:0,66,923	0/0:20,0:20:57.19:0,57,789	0/0:14,0:14:42.14:0,42,588	0/0:17,0:17:51.17:0,51,711	0/0:14,0:14:42.12:0,42,569	1/1:0,20:20:57.19:911,57,0	0/0:16,0:16:48.16:0,48,671	0/0:22,0:22:66.22:0,66,923	0/0:9,0:9:24.08:0,24,335	0/0:13,0:13:39.13:0,39,546	0/0:20,0:20:60.20:0,60,839	0/0:13,0:12:36.12:0,36,503	0/0:7,0:7:21.07:0,21,294	0/0:13,0:13:39.13:0,39,545	0/0:15,0:15:45.15:0,45,626	0/0:22,0:22:66.22:0,66,921	0/0:30,0:30:87.28:0,87,1195	0/0:30,0:29:90.27:0,90,1212	0/0:14,0:14:39.12:0,39,528
chr10	33399414	.	TA	T	1795.69	PASS	AB=0.819;AC=18;AF=0.321;AN=56;BaseQRankSum=4.804;DP=409;FS=9.876;HRun=12;HaplotypeScore=50.9498;InbreedingCoeff=0.7823;MQ=80.28;MQ0=1;MQRankSum=1.594;QD=13.81;ReadPosRankSum=1.438;VQSLOD=3.4334;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:21.04:0,21,213	0/0:3,0:3:9.02:0,9,91	0/0:24,0:22:13.82:0,14,148	0/0:16,0:12:9.40:0,9,77	1/1:5,14:19:11.37:271,11,0	1/1:4,19:23:20.36:341,20,0	1/1:0,4:4:8.97:70,9,0	0/0:25,0:25:54.07:0,54,537	1/1:1,10:12:28.93:215,29,0	0/0:22,1:24:36.55:0,37,522	0/0:14,0:14:33.07:0,33,335	1/1:2,9:11:26.89:209,27,0	0/0:12,0:12:30.06:0,30,305	0/0:11,0:12:29.89:0,30,288	0/0:2,0:15:34.09:0,34,171	0/1:7,1:8:2.19:2,0,162	1/1:6,20:26:56.77:441,57,0	0/0:17,0:17:36.07:0,36,365	0/0:15,2:17:1.61:0,2,373	0/0:22,2:24:16.32:0,16,532	0/1:4,2:6:28.44:28,0,104	0/0:5,0:6:8.18:0,8,116	1/1:3,10:13:29.88:232,30,0	1/1:0,8:8:23.91:186,24,0	0/0:13,1:15:15.67:0,16,326	0/0:18,0:20:53.88:0,54,520	0/0:10,0:10:24.05:0,24,244	0/0:12,0:13:26.89:0,27,258
chr10	33399548	.	A	AAGAGAGAGAGAGAG	11998.69	PASS	AB=0.667;AC=51;AF=0.911;AN=56;BaseQRankSum=-1.272;DP=349;FS=4.850;HRun=0;HaplotypeScore=128.8373;InbreedingCoeff=0.2439;MQ=45.56;MQ0=13;MQRankSum=-0.897;QD=38.96;ReadPosRankSum=1.705;VQSLOD=4.2607;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:7,0:13:20.44:20,0,47	1/1:0,1:1:3.01:166,3,0	0/0:20,0:10:1.12:0,1,380	0/0:21,0:9:5.03:0,5,187	1/1:17,0:14:11.89:364,12,0	1/1:10,0:10:17.96:564,18,0	1/1:12,0:11:5.49:262,5,0	1/1:26,0:23:30.09:1025,30,0	1/1:7,0:7:2.35:23,2,0	1/1:16,0:15:36.12:1893,36,0	1/1:3,5:12:3.01:154,3,0	1/1:9,0:15:18.04:386,18,0	1/1:13,0:12:23.95:635,24,0	1/1:8,0:7:3.01:50,3,0	1/1:6,6:17:3.01:149,3,0	1/1:3,4:11:6.02:296,6,0	1/1:10,0:10:18.06:756,18,0	1/1:6,0:6:12.44:258,12,0	1/1:7,0:6:15.02:366,15,0	1/1:15,0:15:18.06:863,18,0	1/1:7,0:4:9.47:100,9,0	1/1:7,0:6:6.02:306,6,0	1/1:5,0:13:9.03:217,9,0	1/1:8,0:12:6.02:108,6,0	1/1:16,0:13:21.05:883,21,0	1/1:11,0:12:29.59:1309,30,0	1/1:11,0:11:4:323,4,0	1/1:5,0:6:9.03:521,9,0
chr10	33401443	.	T	TACAC	3751.60	PASS	AB=1.000;AC=44;AF=0.786;AN=56;BaseQRankSum=6.351;DP=570;FS=8.485;HRun=0;HaplotypeScore=189.9714;InbreedingCoeff=0.4775;MQ=60.55;MQ0=3;MQRankSum=-4.407;QD=8.09;ReadPosRankSum=-4.697;VQSLOD=0.9223;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,99,1504	1/1:7,0:7:6.01:61,6,0	0/0:24,0:15:14.40:0,14,233	0/0:20,0:15:9.79:0,10,436	1/1:25,0:25:19.02:217,19,0	1/1:17,0:17:3.27:51,3,0	1/1:30,0:29:12.28:143,12,0	1/1:31,0:31:20.73:242,21,0	1/1:21,0:21:2.42:101,2,0	1/1:26,0:26:26.76:263,27,0	0/1:16,0:15:0.04:0,0,0	1/1:24,0:24:4.86:67,5,0	1/1:24,0:24:30.01:418,30,0	0/1:15,0:15:15.47:59,0,15	1/1:9,9:18:6.02:123,6,0	1/1:28,0:28:22.30:338,22,0	1/1:13,0:13:4.46:22,4,0	1/1:16,0:16:8.90:82,9,0	1/1:16,0:15:22.17:261,22,0	1/1:21,0:21:18.45:282,18,0	1/1:11,0:11:3:25,3,0	0/1:13,0:13:0.17:0,0,0	0/0:17,0:17:0.40:0,0,1	1/1:24,0:24:17.52:197,18,0	1/1:21,0:21:7.40:151,7,0	1/1:23,0:23:26.73:468,27,0	0/1:15,0:15:1.58:76,0,2	1/1:5,0:5:6.02:104,6,0
chr10	33401449	.	C	CACACACA	4260.52	PASS	AB=0.995;AC=24;AF=0.429;AN=56;BaseQRankSum=5.796;DP=595;FS=25.104;HRun=0;HaplotypeScore=214.5465;InbreedingCoeff=-0.3686;MQ=54.28;MQ0=6;MQRankSum=-1.229;QD=9.57;ReadPosRankSum=-1.980;VQSLOD=2.2222;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:45:99:0,111,2315	1/1:8,0:8:6.01:71,6,0	0/0:26,0:12:13.17:0,13,246	0/0:21,0:14:34.06:0,34,536	1/1:27,2:29:21.56:462,22,0	1/1:16,1:17:15.59:148,16,0	0/1:36,2:37:42.36:309,0,42	0/1:29,0:28:99:157,0,224	0/1:23,1:24:17.63:230,0,18	0/1:28,0:28:99:290,0,173	0/0:16,0:15:8.68:0,9,56	0/1:24,0:24:69.74:70,0,160	0/1:23,0:23:99:420,0,103	0/1:15,0:15:51.27:51,0,84	0/1:19,0:18:31.64:162,0,32	0/1:29,0:29:74.46:411,0,74	0/1:12,0:12:7.81:112,0,8	0/1:15,0:15:64.81:80,0,65	0/1:17,0:15:91.34:174,0,91	0/1:21,0:21:43.85:242,0,44	0/0:8,0:8:0.56:0,1,25	0/0:15,0:15:5.43:0,5,31	0/0:18,0:18:14.96:0,15,84	0/1:26,0:24:14.07:172,0,14	0/1:25,0:24:99:131,0,130	0/1:25,0:25:99:432,0,168	0/1:16,0:15:60.12:60,0,115	0/1:5,0:5:23.19:76,0,23
chr10	33401455	.	C	CAG	595.30	PASS	AB=0.944;AC=8;AF=0.143;AN=56;BaseQRankSum=5.609;DP=600;FS=1.279;HRun=0;HaplotypeScore=149.8683;InbreedingCoeff=0.0674;MQ=48.28;MQ0=6;MQRankSum=1.014;QD=3.89;ReadPosRankSum=2.149;VQSLOD=3.0227;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:39:77.17:0,77,1142	1/1:7,0:7:0.47:1,0,0	0/0:26,0:8:17.44:0,17,153	0/0:22,0:14:35.36:0,35,333	0/1:28,0:28:12.02:261,0,12	0/1:22,0:22:62.82:145,0,63	0/1:19,19:38:24.98:25,0,96	0/0:26,0:25:63.30:0,63,480	0/1:24,0:24:30.93:185,0,31	0/0:27,0:27:50.43:0,50,507	0/0:17,0:16:11.51:0,12,94	0/0:23,0:23:9.37:0,9,206	0/0:23,0:23:9.67:0,10,162	0/0:15,0:15:4.21:0,4,139	0/1:20,0:19:0.60:1,0,82	0/0:28,0:28:17.91:0,18,216	0/1:13,0:13:0.11:93,0,0	0/0:15,0:15:22.65:0,23,136	0/0:19,0:17:42:0,42,248	0/0:18,0:18:13.15:0,13,118	0/0:9,0:9:5.52:0,6,48	0/0:17,0:17:10.81:0,11,93	0/0:19,0:19:14.95:0,15,116	0/0:26,0:24:0.55:0,1,42	0/0:28,0:27:23.04:0,23,318	0/0:25,0:25:56.23:0,56,479	0/0:18,0:17:33.24:0,33,243	0/0:6,0:6:8.82:0,9,63
chr10	33403079	.	CT	C	2325.07	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=6.212;DP=702;FS=3.823;HRun=1;HaplotypeScore=94.4009;InbreedingCoeff=0.9953;MQ=89.57;MQ0=1;MQRankSum=-2.803;QD=34.70;ReadPosRankSum=3.879;VQSLOD=3.7152;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:94.82:0,95,1439	0/0:9,0:9:27.09:0,27,431	0/0:31,0:30:86.48:0,86,1365	0/0:24,0:23:69.15:0,69,1020	0/0:28,0:28:84.29:0,84,1339	0/0:28,0:28:84.24:0,84,1272	0/0:18,0:18:54.15:0,54,815	0/0:37,0:37:99:0,111,1671	0/0:23,0:23:69.22:0,69,1079	0/0:30,0:30:87.28:0,87,1352	0/0:29,0:29:87.12:0,87,1332	1/1:0,18:18:48.16:669,48,0	0/0:33,0:33:99:0,99,1548	0/0:24,0:24:72.25:0,72,1150	0/0:21,0:21:63.19:0,63,961	0/0:20,0:20:60.20:0,60,958	0/0:33,0:33:96.25:0,96,1434	0/0:7,0:7:20.99:0,21,279	0/0:24,0:24:69.22:0,69,1061	0/0:37,0:37:99:0,111,1680	0/0:15,0:15:45.15:0,45,716	0/0:39,0:39:99:0,114,1797	1/1:0,23:23:60.20:837,60,0	1/1:0,26:26:69.23:962,69,0	0/0:27,0:27:81.27:0,81,1270	0/0:25,0:25:75.24:0,75,1176	0/0:33,0:33:99:0,99,1526	0/0:6,0:6:18.06:0,18,287
chr10	33404395	.	G	GA	9419.77	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=5.294;DP=631;FS=4.809;HRun=8;HaplotypeScore=165.9471;InbreedingCoeff=0.9834;MQ=73.25;MQ0=0;MQRankSum=-15.632;QD=28.04;ReadPosRankSum=-2.524;VQSLOD=2.3597;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:62,0:62:99:0,150,1372	1/1:1,7:6:15.04:172,15,0	0/0:19,0:19:13.52:0,14,274	0/0:21,0:21:21.50:0,21,331	0/0:26,0:26:53.84:0,54,485	0/0:21,0:21:54.01:0,54,493	0/0:28,0:29:61.82:0,62,548	1/1:10,19:29:66.66:756,67,0	0/0:19,0:19:44.99:0,45,403	1/1:3,23:26:75.22:861,75,0	1/1:2,19:21:57.17:653,57,0	0/0:17,0:17:42.01:0,42,383	1/1:3,18:21:57.16:654,57,0	1/1:5,23:29:72.03:795,72,0	1/1:6,0:22:54.04:283,54,0	1/1:1,21:22:57.16:652,57,0	0/0:29,0:28:63.02:0,63,572	1/1:3,6:9:18.05:207,18,0	1/1:5,13:18:48.14:550,48,0	1/1:5,20:25:60.17:687,60,0	1/1:5,6:11:18.05:202,18,0	1/1:2,25:27:75.22:853,75,0	0/0:34,0:34:87.02:0,87,789	0/0:18,0:18:47.97:0,48,431	1/1:3,19:21:57.16:646,57,0	1/1:3,16:19:54.16:622,54,0	1/1:2,19:21:63.18:724,63,0	1/1:1,5:6:9.03:103,9,0
chr10	33404408	.	T	TCTA	29806.25	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=2.960;DP=654;FS=21.876;HRun=0;HaplotypeScore=133.7733;InbreedingCoeff=0.9325;MQ=70.22;MQ0=1;MQRankSum=-10.590;QD=54.19;ReadPosRankSum=1.573;VQSLOD=4.6087;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,163,2765	1/1:1,6:5:15.05:331,15,0	0/0:21,0:19:48.06:0,48,768	0/0:28,0:27:64.59:0,65,959	1/1:2,28:30:72.20:1630,72,0	1/1:0,19:19:54.19:1276,54,0	1/1:2,25:28:66.23:1525,66,0	1/1:8,22:31:84.24:1703,84,0	1/1:1,16:17:45.15:1061,45,0	1/1:3,24:28:84.08:1666,84,0	1/1:4,20:24:48.16:1127,48,0	1/1:15,0:15:42.14:714,42,0	1/1:2,21:23:57.20:1337,57,0	1/1:3,24:28:66.23:1522,66,0	1/1:5,15:21:45.15:1049,45,0	1/1:5,17:22:63.22:1456,63,0	1/1:0,33:33:54.28:1678,54,0	1/1:3,7:10:5.13:355,5,0	1/1:6,14:20:54.15:1102,54,0	1/1:4,20:24:66.21:1499,66,0	1/1:0,10:11:24.08:556,24,0	1/1:4,25:30:72.25:1679,72,0	1/1:28,0:28:78.26:1316,78,0	1/1:18,0:18:48.16:794,48,0	1/1:5,24:28:72.25:1689,72,0	1/1:4,16:21:60.14:1255,60,0	1/1:6,21:27:59.80:1324,60,0	1/1:3,2:5:8.99:161,9,0
chr10	33404409	.	C	CTAT	23629.85	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=7.278;DP=621;FS=27.355;HRun=0;HaplotypeScore=139.1340;InbreedingCoeff=0.9473;MQ=71.28;MQ0=1;MQRankSum=-10.661;QD=45.79;ReadPosRankSum=2.611;VQSLOD=4.1051;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,163,2962	1/1:7,0:5:15.05:267,15,0	0/0:23,0:21:54.11:0,54,916	0/0:28,0:27:42.92:0,43,987	1/1:30,0:30:55.16:1171,55,0	1/1:20,0:20:54.18:903,54,0	1/1:25,0:25:63.22:1051,63,0	1/1:26,0:28:37.74:1121,38,0	1/1:15,0:15:45.15:785,45,0	1/1:25,0:25:69.51:1199,70,0	1/1:22,0:23:48.16:885,48,0	1/1:1,14:15:39.13:960,39,0	1/1:22,0:22:54.19:986,54,0	1/1:26,0:26:66.23:1228,66,0	1/1:16,0:16:39.13:718,39,0	1/1:21,0:21:63.21:1137,63,0	1/1:34,0:33:57.40:1199,57,0	1/1:9,0:9:12.06:262,12,0	1/1:16,0:17:41.56:694,42,0	1/1:24,0:24:44.23:1166,44,0	1/1:11,0:11:24.08:450,24,0	1/1:26,0:26:66.23:1216,66,0	1/1:4,27:31:81.28:1955,81,0	1/1:0,18:18:48.16:1183,48,0	1/1:28,0:27:49.24:1173,49,0	1/1:19,0:19:52.41:884,52,0	1/1:23,0:24:31.80:925,32,0	1/1:2,0:2:6.02:112,6,0
chr10	33405324	.	AAAATAAATAAATAAATAAAT	A	946.82	PASS	AB=1.000;AC=13;AF=0.464;AN=28;BaseQRankSum=-0.768;DP=169;FS=9.342;HRun=0;HaplotypeScore=58.7877;InbreedingCoeff=0.4349;MQ=35.34;MQ0=34;MQRankSum=1.178;QD=12.62;ReadPosRankSum=-0.358;VQSLOD=0.1843;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:12:18.01:0,18,300	./.	./.	./.	0/0:2,0:2:3.01:0,3,40	0/0:3,0:2:3.01:0,3,40	./.	1/1:25,0:17:12.01:164,12,0	./.	./.	./.	0/0:4,0:5:8.94:0,9,108	1/1:6,0:6:3.01:50,3,0	1/1:4,3:6:3.01:160,3,0	./.	0/0:2,0:2:2.98:0,3,21	0/1:18,0:13:52.56:53,0,159	0/0:5,6:9:9.03:0,9,128	1/1:5,3:6:9.03:265,9,0	./.	./.	./.	./.	./.	0/0:6,0:5:2.98:0,3,22	1/1:2,2:3:6.02:211,6,0	1/1:3,3:5:3.01:160,3,0	./.
chr10	33405358	.	AATAAATAAATAG	A	429.90	PASS	AB=0.939;AC=10;AF=0.238;AN=42;BaseQRankSum=2.265;DP=131;FS=28.905;HRun=0;HaplotypeScore=64.5590;InbreedingCoeff=0.0599;MQ=46.70;MQ0=6;MQRankSum=-1.498;QD=6.32;ReadPosRankSum=3.880;VQSLOD=0.0151;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:5,7:10:7.47:95,0,7	./.	./.	./.	0/0:1,0:1:2.97:0,3,20	1/1:2,0:2:5.98:48,6,0	./.	0/0:14,0:11:23.90:0,24,198	./.	0/0:3,0:3:5.93:0,6,40	0/0:3,0:3:8.99:0,9,75	0/0:10,0:9:5.10:0,5,161	0/0:4,0:4:5.87:0,6,36	0/1:4,0:3:11.98:61,0,12	0/0:1,0:1:2.94:0,3,18	0/0:4,0:4:11.97:0,12,97	1/1:13,0:10:20.72:158,21,0	0/1:14,0:9:13.02:13,0,22	0/1:12,0:10:55.36:55,0,146	0/0:5,0:5:5.99:0,6,50	0/0:5,0:4:11.99:0,12,100	./.	0/0:1,0:1:3.01:0,3,67	0/0:2,0:1:0.47:0,0,1	0/0:4,0:3:8.94:0,9,68	0/1:4,0:4:35.98:76,0,36	0/1:7,0:7:52.13:52,0,69	./.
chr10	33405397	.	AT	A	458.97	PASS	AB=0.722;AC=8;AF=0.148;AN=54;BaseQRankSum=4.078;DP=242;FS=0.000;HRun=2;HaplotypeScore=65.0657;InbreedingCoeff=0.6271;MQ=74.76;MQ0=1;MQRankSum=-2.965;QD=12.40;ReadPosRankSum=-0.317;VQSLOD=1.9502;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:11:20.81:0,21,231	./.	0/0:6,0:5:11.84:0,12,107	0/0:13,0:9:8.14:0,8,146	0/0:10,0:10:29.93:0,30,253	0/0:5,0:5:11.99:0,12,103	0/0:1,0:1:3:0,3,26	0/0:32,0:31:73.43:0,73,1204	0/0:3,0:3:9:0,9,78	0/0:5,0:5:12.04:0,12,179	0/0:6,0:6:18.05:0,18,249	1/1:1,9:9:10.31:272,10,0	0/0:6,0:6:17.99:0,18,240	0/0:7,0:6:18.06:0,18,256	1/1:0,8:8:21.07:269,21,0	0/0:5,0:5:15.05:0,15,224	0/0:16,0:14:35.93:0,36,300	0/1:16,1:13:8.27:8,0,317	0/0:21,0:19:57.18:0,57,831	0/0:9,0:9:27.06:0,27,364	0/0:8,0:7:21.07:0,21,314	0/0:3,0:3:9.03:0,9,134	1/1:0,1:1:3.01:38,3,0	0/1:0,1:1:0:0,0,0	0/0:12,0:12:36.08:0,36,513	0/0:7,0:7:21.07:0,21,312	0/0:12,0:12:30.06:0,30,421	0/0:4,0:4:12.04:0,12,178
chr10	33405399	.	T	TA	883.46	PASS	AB=1.000;AC=11;AF=0.212;AN=52;BaseQRankSum=-2.306;DP=252;FS=10.131;HRun=8;HaplotypeScore=65.4460;InbreedingCoeff=0.7634;MQ=74.29;MQ0=1;MQRankSum=1.663;QD=19.63;ReadPosRankSum=-0.360;VQSLOD=2.6541;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:11:14.96:0,15,129	./.	0/1:7,0:5:5.96:6,0,20	0/0:13,0:9:11.63:0,12,101	1/1:1,10:11:30.09:344,30,0	1/1:1,6:6:12.04:138,12,0	1/1:0,1:1:3.01:35,3,0	0/0:31,0:31:74.54:0,75,683	1/1:0,3:3:9.03:104,9,0	0/0:5,0:5:12.01:0,12,110	0/0:6,0:6:18.01:0,18,165	0/0:10,0:9:20.62:0,21,85	0/0:6,0:6:18.01:0,18,164	0/0:7,0:6:15:0,15,137	0/0:8,0:8:17.77:0,18,66	0/0:5,0:5:15.01:0,15,137	1/1:1,15:14:36.11:415,36,0	0/0:18,0:14:26.38:0,26,228	0/0:21,0:19:56.99:0,57,511	0/0:10,0:10:27:0,27,244	0/0:12,0:11:26.97:0,27,238	0/0:3,0:3:9:0,9,82	0/0:1,0:1:2.50:0,2,9	./.	0/0:12,0:12:33.02:0,33,302	0/0:9,0:9:24:0,24,216	0/0:13,0:13:33.01:0,33,297	0/0:4,0:4:12.01:0,12,110
chr10	33405614	.	TAA	T	3866.32	PASS	AB=1.000;AC=35;AF=0.625;AN=56;BaseQRankSum=8.345;DP=382;FS=6.058;HRun=15;HaplotypeScore=98.9380;InbreedingCoeff=0.8747;MQ=64.68;MQ0=3;MQRankSum=-8.945;QD=16.67;ReadPosRankSum=3.203;VQSLOD=2.9956;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:15:44.41:0,44,413	1/1:3,4:7:8.96:79,9,0	0/0:30,0:14:10.60:0,11,86	0/1:16,0:8:1.15:1,0,59	0/0:15,0:15:42.56:0,43,509	0/0:9,1:11:3.07:0,3,239	0/0:9,0:11:32.05:0,32,351	1/1:9,12:21:41.75:361,42,0	0/0:19,0:19:45.08:0,45,516	1/1:8,10:18:35.85:310,36,0	1/1:5,6:13:22.67:179,23,0	0/0:7,0:7:17.88:0,18,167	1/1:7,12:19:38.75:338,39,0	1/1:4,8:12:26.92:237,27,0	0/0:14,0:14:33.07:0,33,351	1/1:4,11:17:36.25:325,36,0	0/0:16,0:16:35.06:0,35,411	1/1:4,5:10:17.64:144,18,0	1/1:7,9:16:23.84:211,24,0	1/1:3,9:12:26.94:237,27,0	1/1:0,4:4:8.98:79,9,0	1/1:2,7:9:20.75:166,21,0	0/0:12,0:12:23.63:0,24,159	1/1:1,1:2:2.99:26,3,0	1/1:2,5:7:11.92:106,12,0	1/1:3,16:20:53.54:449,54,0	1/1:5,15:21:50.57:433,51,0	1/1:1,7:8:20.99:185,21,0
chr10	33405640	.	GA	G	4645.91	PASS	AB=1.000;AC=49;AF=0.875;AN=56;BaseQRankSum=5.532;DP=419;FS=0.000;HRun=1;HaplotypeScore=99.6837;InbreedingCoeff=-0.1373;MQ=84.50;MQ0=2;MQRankSum=-6.087;QD=11.09;ReadPosRankSum=8.578;VQSLOD=2.2175;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:11:22.44:114,22,0	0/1:8,0:8:46.16:46,0,54	0/1:21,0:19:12.98:13,0,168	0/1:19,0:15:28.77:29,0,73	1/1:12,1:13:11.49:155,11,0	1/1:21,0:21:0.72:173,1,0	1/1:14,0:14:35.72:165,36,0	0/1:32,0:32:3.53:259,0,4	1/1:13,0:13:29.94:172,30,0	1/1:19,0:19:52.93:275,53,0	1/1:11,0:11:30.06:183,30,0	1/1:10,1:11:25.44:149,25,0	1/1:24,0:24:42.13:343,42,0	1/1:17,0:17:49.10:300,49,0	0/1:13,0:13:12.85:124,0,13	1/1:18,0:18:46.53:293,47,0	0/1:13,0:13:12.98:101,0,13	1/1:10,0:10:23.09:129,23,0	1/1:16,1:17:45.58:249,46,0	1/1:9,0:9:25.87:150,26,0	0/1:8,0:8:7.51:66,0,8	1/1:12,0:11:27.06:168,27,0	1/1:9,0:9:24.97:118,25,0	1/1:3,0:3:2.96:19,3,0	1/1:9,0:9:19.91:110,20,0	1/1:23,0:23:28.06:250,28,0	1/1:28,1:29:47.17:375,47,0	1/1:12,0:12:9.25:117,9,0
chr10	33405798	.	GTA	G	914.80	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=5.672;DP=610;FS=25.390;HRun=0;HaplotypeScore=83.7782;InbreedingCoeff=0.9533;MQ=87.60;MQ0=0;MQRankSum=-7.574;QD=30.49;ReadPosRankSum=-0.907;VQSLOD=2.5569;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,105,2001	0/0:7,0:7:18.06:0,18,348	0/0:23,0:23:69.19:0,69,1218	0/0:26,0:26:75.26:0,75,1422	0/0:35,0:35:99:0,105,2001	0/0:25,0:24:72.25:0,72,1390	0/0:21,0:21:57.17:0,57,1066	0/0:39,0:39:99:0,117,2238	0/0:18,0:18:54.17:0,54,1010	0/0:26,0:26:78.27:0,78,1506	0/0:23,0:23:69.24:0,69,1333	1/1:0,8:8:21.05:298,21,0	0/0:26,0:26:66.23:0,66,1253	0/0:26,0:26:78.27:0,78,1493	1/1:0,12:12:33.11:502,33,0	0/0:27,0:27:78.27:0,78,1486	0/0:19,0:19:57.20:0,57,1101	0/0:15,0:15:45.15:0,45,869	0/0:29,0:29:87.29:0,87,1644	0/0:30,0:30:90.31:0,90,1720	0/0:35,0:35:99:0,99,1896	0/0:16,0:16:45.15:0,45,869	1/1:0,4:4:12.04:174,12,0	1/1:0,6:5:6.02:91,6,0	0/0:17,0:17:48.16:0,48,915	0/0:26,0:26:78.27:0,78,1486	0/0:31,0:31:90.31:0,90,1725	0/0:5,0:5:15.05:0,15,290
chr10	33405868	.	T	TC	19681.73	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-10.001;DP=631;FS=7.707;HRun=4;HaplotypeScore=63.9259;InbreedingCoeff=0.9924;MQ=85.12;MQ0=0;MQRankSum=-8.360;QD=35.85;ReadPosRankSum=2.394;VQSLOD=5.2347;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:39:99:0,120,1361	1/1:0,6:6:15.05:205,15,0	0/0:15,0:16:25.30:0,25,422	0/0:26,0:26:63.09:0,63,683	1/1:1,25:26:63.17:839,63,0	1/1:0,18:17:54.18:739,54,0	1/1:0,22:22:60.20:821,60,0	1/1:3,31:34:93.26:1217,93,0	1/1:1,17:18:48.16:657,48,0	1/1:0,28:28:81.27:1106,81,0	1/1:1,26:27:66.22:902,66,0	1/1:1,29:30:81.18:1065,81,0	1/1:3,28:31:72.22:985,72,0	1/1:1,23:24:69.23:943,69,0	1/1:2,20:22:48.16:644,48,0	1/1:1,25:26:69.23:944,69,0	1/1:0,25:25:75.25:1026,75,0	1/1:2,10:12:27.09:369,27,0	1/1:2,17:19:51.17:698,51,0	1/1:0,25:25:72.20:963,72,0	1/1:4,17:21:51.17:698,51,0	1/1:0,20:20:51.17:697,51,0	1/1:1,10:11:27.09:369,27,0	1/1:1,26:27:69.23:943,69,0	1/1:0,26:26:72.24:985,72,0	1/1:1,18:19:51.15:679,51,0	1/1:0,23:23:63.21:860,63,0	1/1:0,9:9:24.08:328,24,0
chr10	33405917	.	TCTC	T	833.92	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.694;DP=639;FS=0.000;HRun=0;HaplotypeScore=127.0024;InbreedingCoeff=0.9840;MQ=78.07;MQ0=3;MQRankSum=-1.886;QD=39.71;ReadPosRankSum=-0.502;VQSLOD=4.5969;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,147,3167	0/0:5,0:5:15.05:0,15,330	0/0:35,0:28:61.58:0,62,1162	0/0:32,0:23:58.02:0,58,977	0/0:26,0:26:69.24:0,69,1520	0/0:18,0:17:54.13:0,54,1047	0/0:14,0:14:39.07:0,39,687	0/0:38,0:38:96.30:0,96,2021	0/0:19,0:19:51.17:0,51,1109	0/0:20,0:20:54.19:0,54,1179	0/0:21,0:21:48.16:0,48,1058	0/0:22,0:22:54.17:0,54,1117	0/0:19,0:19:51.18:0,51,1126	0/0:14,0:14:39.13:0,39,848	1/1:5,16:21:60.19:929,60,0	0/0:20,0:20:57.20:0,57,1240	0/0:28,0:28:78.27:0,78,1720	0/0:15,0:15:42.14:0,42,926	0/0:24,0:24:60.19:0,60,1254	0/0:28,0:28:78.27:0,78,1708	0/0:22,0:22:63.19:0,63,1275	0/0:19,0:19:54.18:0,54,1136	0/0:14,0:14:33.10:0,33,686	0/0:28,0:28:66.23:0,66,1433	0/0:25,0:25:72.24:0,72,1513	0/0:20,0:20:54.16:0,54,1072	0/0:27,0:27:78.27:0,78,1697	0/0:14,0:14:39.13:0,39,859
chr10	33406602	.	A	AT	18250.32	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-2.315;DP=667;FS=15.190;HRun=7;HaplotypeScore=89.5528;InbreedingCoeff=0.8864;MQ=83.73;MQ0=0;MQRankSum=-8.907;QD=29.11;ReadPosRankSum=5.890;VQSLOD=3.4629;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,26:31:69.21:834,69,0	1/1:3,10:13:1.14:297,1,0	0/0:20,0:20:41.08:0,41,375	0/0:20,0:20:50.15:0,50,417	1/1:5,28:34:96.15:1128,96,0	1/1:3,19:22:45.14:544,45,0	1/1:1,19:20:48.15:580,48,0	1/1:5,29:34:87.27:1049,87,0	1/1:1,19:20:51.16:616,51,0	1/1:5,32:37:96.28:1148,96,0	1/1:2,22:24:37.19:716,37,0	1/1:1,26:27:66.20:797,66,0	1/1:5,25:30:72.22:868,72,0	1/1:1,19:20:51.16:616,51,0	1/1:1,14:16:42.13:505,42,0	1/1:3,19:22:42.13:507,42,0	1/1:1,19:20:51.16:616,51,0	1/1:1,11:12:30.09:361,30,0	1/1:6,24:30:72.20:845,72,0	1/1:4,25:29:75.18:889,75,0	1/1:2,19:21:45.14:544,45,0	1/1:1,19:20:51.16:616,51,0	1/1:1,29:30:69.21:834,69,0	1/1:4,18:22:54.17:652,54,0	1/1:3,16:19:36.11:435,36,0	1/1:2,31:33:93.23:1094,93,0	1/1:3,32:35:81.08:978,81,0	1/1:0,6:6:15.05:181,15,0
chr10	33406722	.	TC	T	574.41	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.345;DP=620;FS=15.637;HRun=3;HaplotypeScore=65.3296;InbreedingCoeff=0.9955;MQ=87.39;MQ0=0;MQRankSum=-2.349;QD=28.72;ReadPosRankSum=0.866;VQSLOD=1.9350;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,147,2092	0/0:8,0:8:21.07:0,21,302	0/0:31,0:31:90.15:0,90,1182	0/0:14,0:14:41.77:0,42,500	0/0:32,0:32:93.31:0,93,1329	0/0:16,0:16:45.15:0,45,648	0/0:21,0:21:63.19:0,63,887	0/0:21,0:21:57.19:0,57,821	0/0:11,0:11:33.08:0,33,438	0/0:27,0:27:75.24:0,75,1064	0/0:17,0:17:51.17:0,51,734	0/0:33,0:33:93.28:0,93,1302	0/0:17,0:17:48.16:0,48,690	0/0:22,0:22:63.20:0,63,888	1/1:0,20:20:54.17:669,54,0	0/0:23,0:23:69.23:0,69,993	0/0:29,0:29:87.28:0,87,1233	0/0:14,0:14:39.13:0,39,561	0/0:22,0:22:57.18:0,57,800	0/0:20,0:20:60.20:0,60,858	0/0:28,0:28:81.25:0,81,1131	0/0:21,0:21:60.17:0,60,824	0/0:21,0:21:63.20:0,63,886	0/0:30,0:30:90.29:0,90,1276	0/0:17,0:17:51.17:0,51,734	0/0:18,0:18:51.17:0,51,735	0/0:25,0:25:75.25:0,75,1078	0/0:12,0:12:36.09:0,36,481
chr10	33409844	.	A	AACACAC	2643.26	PASS	AB=0.729;AC=26;AF=0.500;AN=52;BaseQRankSum=-1.510;DP=601;FS=2.877;HRun=0;HaplotypeScore=168.7033;InbreedingCoeff=0.3153;MQ=60.67;MQ0=7;MQRankSum=-3.282;QD=7.62;ReadPosRankSum=-2.580;VQSLOD=2.5466;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:26:2.59:0,3,97	0/0:6,0:8:1.74:0,2,4	./.	./.	1/1:19,0:29:8.16:238,8,0	1/1:23,0:29:6.02:156,6,0	1/1:18,0:17:6.02:167,6,0	0/0:29,0:32:8.92:0,9,141	1/1:10,1:16:5.85:93,6,0	1/1:7,0:19:6.15:62,6,0	0/1:13,0:23:20.72:21,0,177	1/1:13,0:12:15.05:329,15,0	0/0:11,0:18:14.58:0,15,159	0/0:7,0:13:14.48:0,14,231	1/1:8,1:16:15.52:397,16,0	0/0:13,0:25:2.99:0,3,201	0/1:22,0:32:3.49:383,0,3	0/1:10,0:14:62.01:62,0,85	0/1:11,0:14:16.84:59,0,17	1/1:13,0:18:0.57:22,1,0	0/0:11,0:20:10.80:0,11,185	0/0:20,0:33:8.32:0,8,72	1/1:16,1:25:8.82:234,9,0	1/1:18,2:30:18.06:491,18,0	0/0:18,0:31:9.56:0,10,130	0/1:15,0:22:70.55:71,0,132	0/1:8,0:26:5.69:27,0,6	0/0:5,0:6:0.88:0,1,2
chr10	33410300	.	CA	C	4945.33	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=15.062;DP=655;FS=12.409;HRun=8;HaplotypeScore=61.5583;InbreedingCoeff=0.9986;MQ=74.66;MQ0=0;MQRankSum=-1.457;QD=26.45;ReadPosRankSum=1.372;VQSLOD=4.8496;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:73.11:0,73,871	0/0:15,0:15:36.10:0,36,425	0/0:14,0:14:35.69:0,36,397	0/0:9,0:9:19.29:0,19,212	1/1:2,33:35:96.11:918,96,0	1/1:2,31:33:93.15:898,93,0	1/1:0,16:16:42.07:406,42,0	0/0:39,0:39:99:0,102,1219	1/1:0,17:17:48.08:463,48,0	0/0:30,0:30:84.25:0,84,1007	0/0:33,0:33:87.25:0,87,1037	1/1:1,20:21:54.08:522,54,0	0/0:22,0:22:63.15:0,63,735	0/0:20,0:20:57.12:0,57,671	0/0:17,0:17:48.15:0,48,580	0/0:22,0:22:60.17:0,60,707	1/1:2,16:18:48.07:464,48,0	0/0:13,0:13:39.12:0,39,469	0/0:20,0:20:60.18:0,60,717	0/0:28,0:28:84.26:0,84,1015	0/0:17,0:17:48.04:0,48,559	0/0:39,0:39:99:0,105,1222	1/1:1,22:23:63.10:608,63,0	1/1:1,23:24:69.11:666,69,0	0/0:29,0:29:84.24:0,84,994	0/0:31,0:31:87.25:0,87,1032	0/0:34,0:34:99:0,99,1195	0/0:8,0:8:24.07:0,24,290
chr10	33411272	.	TACACAC	T	898.18	PASS	AB=0.954;AC=9;AF=0.173;AN=52;BaseQRankSum=6.850;DP=432;FS=1.326;HRun=0;HaplotypeScore=102.9520;InbreedingCoeff=0.2984;MQ=57.89;MQ0=10;MQRankSum=0.340;QD=9.56;ReadPosRankSum=2.634;VQSLOD=2.1540;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:22:35.79:0,36,924	0/0:13,0:13:36.11:0,36,845	0/0:15,0:11:30.09:0,30,754	0/0:15,0:10:26.85:0,27,688	0/1:20,0:21:53.85:197,0,54	0/1:18,0:20:74.79:75,0,115	1/1:10,0:11:17.28:136,17,0	0/0:24,0:24:63.22:0,63,1651	0/1:5,0:5:13.22:36,0,13	0/0:24,0:24:66.22:0,66,1778	0/0:25,0:24:60.18:0,60,1627	1/1:12,0:13:3.58:366,4,0	0/0:16,0:15:45.15:0,45,1393	0/0:12,0:12:33.11:0,33,988	0/1:6,0:6:7.99:116,0,8	0/0:20,0:20:35.95:0,36,1195	0/1:16,0:17:31.87:113,0,32	0/0:9,0:9:18.06:0,18,438	0/0:8,0:8:21.07:0,21,576	0/0:27,0:27:81.26:0,81,2347	0/0:13,0:12:33.11:0,33,854	0/0:8,0:8:24.08:0,24,717	./.	./.	0/0:22,0:22:57.20:0,57,1650	0/0:15,0:15:42.13:0,42,1123	0/0:20,0:20:54.19:0,54,1629	0/0:16,0:13:36.12:0,36,921
chr10	33411282	.	C	CAGAG	883.94	PASS	AB=0.898;AC=19;AF=0.380;AN=50;BaseQRankSum=5.859;DP=457;FS=0.000;HRun=0;HaplotypeScore=120.8902;InbreedingCoeff=0.6015;MQ=54.48;MQ0=10;MQRankSum=-2.130;QD=4.83;ReadPosRankSum=-2.211;VQSLOD=2.0234;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:16,10:27:15.84:364,16,0	0/0:11,0:12:5.99:0,6,75	./.	./.	1/1:24,0:23:5.74:47,6,0	1/1:22,0:22:11.80:145,12,0	1/1:12,0:12:6.01:61,6,0	0/0:27,0:26:15.03:0,15,178	1/1:8,0:8:9.03:122,9,0	0/0:21,0:21:21.06:0,21,302	0/0:22,0:21:21.22:0,21,347	1/1:15,0:15:5.36:56,5,0	0/0:18,0:18:36.09:0,36,521	0/0:14,0:14:21.02:0,21,244	0/0:3,0:6:6.01:0,6,58	0/1:13,0:21:25.50:25,0,102	1/1:18,0:18:12.02:156,12,0	0/1:9,0:10:30.24:30,0,126	0/0:5,0:6:12.03:0,12,169	0/0:28,0:28:48.62:0,49,714	0/1:16,0:16:8.88:9,0,91	0/0:10,0:11:18.02:0,18,217	./.	1/1:8,0:8:5.98:47,6,0	0/0:21,0:21:33.08:0,33,456	0/0:16,0:16:16.77:0,17,246	0/0:20,0:22:39.10:0,39,565	0/0:16,0:13:9.01:0,9,118
chr10	33411289	.	A	AGAGAGAGAGAGAGC	2162.74	PASS	AB=1.000;AC=13;AF=0.241;AN=54;BaseQRankSum=6.412;DP=477;FS=6.667;HRun=0;HaplotypeScore=200.4986;InbreedingCoeff=0.7014;MQ=51.88;MQ0=12;MQRankSum=-0.271;QD=16.26;ReadPosRankSum=-1.008;VQSLOD=1.8847;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:26:38:0,38,332	0/0:12,0:12:27.01:0,27,400	0/1:12,0:7:0.84:1,0,19	0/0:15,0:8:2.68:0,3,11	1/1:33,0:32:22.82:160,23,0	1/1:20,0:21:16.55:383,17,0	1/1:13,0:13:14.83:205,15,0	0/0:28,0:27:50.89:0,51,683	1/1:8,0:8:10.32:385,10,0	0/0:20,0:20:44.98:0,45,995	0/0:22,0:21:32.47:0,32,930	0/1:15,0:15:2.65:3,0,113	0/0:20,0:19:48.08:0,48,1457	0/0:14,0:14:36.06:0,36,741	0/0:8,0:7:15.01:0,15,261	0/0:21,0:21:21.03:0,21,622	1/1:14,3:21:17.76:1098,18,0	0/1:10,0:10:97.37:97,0,363	0/0:5,0:5:15.02:0,15,486	0/0:26,0:26:63.15:0,63,1823	0/0:17,0:16:42.09:0,42,854	0/0:13,0:13:36.04:0,36,692	./.	0/0:9,0:9:7.79:0,8,48	0/0:18,0:18:48.10:0,48,1293	0/0:14,0:14:35.65:0,36,761	0/0:23,0:23:57.04:0,57,1530	0/0:18,0:14:32.89:0,33,435
chr10	33411291	.	A	AGAGAGAGAGC	1093.81	PASS	AB=0.952;AC=6;AF=0.107;AN=56;BaseQRankSum=7.341;DP=487;FS=5.352;HRun=0;HaplotypeScore=177.3688;InbreedingCoeff=-0.0849;MQ=52.07;MQ0=13;MQRankSum=-3.299;QD=11.76;ReadPosRankSum=2.336;VQSLOD=2.1725;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:27:20.74:0,21,213	0/0:12,0:12:30:0,30,371	0/0:11,0:7:8.99:0,9,90	0/0:14,0:8:5.94:0,6,42	0/0:35,0:35:11.87:0,12,299	0/1:15,9:25:21.88:265,0,22	0/1:13,0:13:80.14:82,0,80	0/0:27,0:26:59.93:0,60,761	0/1:8,0:8:8.44:261,0,8	0/0:20,0:20:51:0,51,889	0/0:23,0:22:34.03:0,34,790	0/1:15,0:15:0.57:1,0,125	0/0:20,0:19:45.11:0,45,1146	0/0:14,0:14:39.06:0,39,662	0/0:9,0:8:15.02:0,15,236	0/0:21,0:21:36.39:0,36,544	0/1:22,0:22:61.30:537,0,61	0/1:10,0:10:64.86:65,0,313	0/0:5,0:5:15.02:0,15,380	0/0:26,0:26:67.03:0,67,1557	0/0:18,0:17:45.05:0,45,695	0/0:13,0:13:36.05:0,36,608	0/0:17,0:17:5.99:0,6,49	0/0:8,0:8:6.93:0,7,51	0/0:17,0:17:48.11:0,48,1070	0/0:14,0:14:38.92:0,39,686	0/0:22,0:22:57.06:0,57,1281	0/0:19,0:14:29.93:0,30,388
chr10	33411583	.	AAGGATATGGTTGCTTCT	A	3826.25	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.764;DP=680;FS=7.677;HRun=0;HaplotypeScore=310.5418;InbreedingCoeff=0.9908;MQ=90.92;MQ0=0;MQRankSum=-8.712;QD=86.96;ReadPosRankSum=3.565;VQSLOD=2.0902;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:99:0,99,7526	0/0:13,0:13:39.13:0,39,2799	0/0:27,0:27:78.26:0,78,4534	0/0:28,0:28:81.28:0,81,5542	0/0:31,0:31:90.31:0,90,6198	0/0:23,0:23:66.23:0,66,4241	0/0:21,0:21:63.20:0,63,4056	0/0:40,0:40:99:0,120,8380	0/0:28,0:28:81.28:0,81,5251	0/0:33,0:33:99:0,99,7337	0/0:18,0:18:54.19:0,54,3702	1/1:1,15:16:36.12:1808,36,0	0/0:26,0:26:78.27:0,78,5940	0/0:29,0:29:87.30:0,87,7104	0/0:31,0:31:90.30:0,90,6767	0/0:33,0:33:99:0,99,7964	0/0:26,0:26:78.27:0,78,5385	0/0:7,0:7:18.06:0,18,1140	0/0:24,0:24:72.25:0,72,4389	0/0:27,0:27:81.28:0,81,6288	0/0:28,0:28:84.27:0,84,5971	0/0:27,0:27:81.25:0,81,5688	1/1:3,12:15:30.10:1395,30,0	1/1:1,12:13:15.01:623,15,0	0/0:30,0:30:90.29:0,90,6633	0/0:24,0:24:72.24:0,72,4809	0/0:20,0:20:60.21:0,60,4114	0/0:9,0:9:27.09:0,27,2276
chr10	33414499	.	C	CT	7852.99	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-16.956;DP=694;FS=8.946;HRun=0;HaplotypeScore=63.1085;InbreedingCoeff=0.9993;MQ=86.47;MQ0=0;MQRankSum=-1.588;QD=42.68;ReadPosRankSum=3.477;VQSLOD=5.1625;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:99:0,99,1378	0/0:9,0:9:27.09:0,27,375	0/0:27,0:27:78.22:0,78,1049	0/0:20,0:20:45.06:0,45,653	1/1:1,32:33:93.32:1474,93,0	1/1:0,34:34:99:1583,99,0	1/1:0,24:24:69.24:1103,69,0	0/0:36,0:36:99:0,105,1396	1/1:1,18:19:54.18:863,54,0	0/0:28,0:28:84.25:0,84,1151	0/0:23,0:23:69.23:0,69,955	1/1:2,12:14:33.11:528,33,0	0/0:28,0:28:84.28:0,84,1173	0/0:27,0:27:81.24:0,81,1108	0/0:19,0:19:57.19:0,57,793	0/0:29,0:29:87.27:0,87,1195	1/1:0,22:22:51.17:815,51,0	0/0:11,0:11:33.08:0,33,441	0/0:28,0:28:81.27:0,81,1114	0/0:30,0:30:87.29:0,87,1213	0/0:28,0:28:81.27:0,81,1129	0/0:20,0:20:60.20:0,60,839	1/1:0,26:26:63.21:1007,63,0	1/1:1,11:12:30.10:480,30,0	0/0:25,0:25:75.25:0,75,1044	0/0:32,0:32:96.32:0,96,1336	0/0:49,0:49:99:0,147,2024	0/0:8,0:8:24.08:0,24,334
chr10	33415107	.	A	AT	5068.93	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=12.542;DP=559;FS=3.736;HRun=6;HaplotypeScore=130.2937;InbreedingCoeff=0.9897;MQ=64.61;MQ0=0;MQRankSum=-13.965;QD=32.49;ReadPosRankSum=-1.941;VQSLOD=2.4754;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:84.19:0,84,857	0/0:4,0:4:12.03:0,12,122	0/0:18,0:13:13.06:0,13,241	0/0:13,0:11:27.05:0,27,273	1/1:6,28:34:99:1219,101,0	1/1:3,19:22:66.16:797,66,0	1/1:2,15:17:42.13:528,42,0	0/0:31,0:31:78.15:0,78,780	1/1:0,20:20:60.12:734,60,0	0/0:22,0:22:63.14:0,63,639	0/0:20,0:20:54.12:0,54,546	1/1:5,13:18:36.12:452,36,0	0/0:23,0:23:60.09:0,60,600	0/0:20,0:20:60.14:0,60,612	0/0:22,0:22:63.13:0,63,635	0/0:15,0:15:42.08:0,42,421	1/1:0,13:13:36.12:452,36,0	0/0:21,0:21:60.14:0,60,612	0/0:22,0:22:48.10:0,48,486	0/0:33,0:33:90.19:0,90,913	0/0:14,0:14:39.09:0,39,398	0/0:15,0:15:42.10:0,42,428	1/1:6,14:20:48.03:566,48,0	1/1:3,9:12:27.04:321,27,0	0/0:21,0:21:54.11:0,54,546	0/0:23,0:23:63.13:0,63,638	0/0:22,0:22:57.11:0,57,574	0/0:10,0:10:21.04:0,21,214
chr10	33415118	.	ATTTTTTCT	A	9020.02	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=14.049;DP=567;FS=2.282;HRun=0;HaplotypeScore=198.5297;InbreedingCoeff=0.9915;MQ=65.74;MQ0=0;MQRankSum=-15.840;QD=63.97;ReadPosRankSum=2.086;VQSLOD=4.9190;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:90.29:0,90,2990	0/0:5,0:5:15.05:0,15,509	0/0:24,0:19:44.66:0,45,1381	0/0:15,0:13:38.87:0,39,1385	1/1:2,29:31:78.73:2060,79,0	1/1:4,18:22:51.18:1372,51,0	1/1:1,17:18:51.18:1371,51,0	0/0:34,0:34:96.32:0,96,3028	1/1:3,15:18:48.15:1233,48,0	0/0:27,0:27:72.25:0,72,2356	0/0:22,0:22:54.18:0,54,1835	1/1:0,12:12:33.11:888,33,0	0/0:24,0:24:66.23:0,66,2272	0/0:22,0:22:66.23:0,66,2287	0/0:24,0:24:63.19:0,63,1821	0/0:17,0:17:45.15:0,45,1467	1/1:5,8:13:24.08:646,24,0	0/0:20,0:20:60.18:0,60,1992	0/0:18,0:18:30.09:0,30,982	0/0:31,0:31:87.30:0,87,2926	0/0:15,0:15:45.15:0,45,1527	0/0:15,0:15:45.15:0,45,1649	1/1:2,14:16:42.14:1129,42,0	1/1:5,6:11:12.04:322,12,0	0/0:20,0:20:45.15:0,45,1561	0/0:23,0:23:63.21:0,63,2090	0/0:23,0:23:57.17:0,57,1794	0/0:10,0:10:27.09:0,27,897
chr10	33415125	.	C	CT	10477.23	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-15.926;DP=546;FS=3.946;HRun=8;HaplotypeScore=115.2207;InbreedingCoeff=0.9855;MQ=66.79;MQ0=0;MQRankSum=10.514;QD=28.01;ReadPosRankSum=0.671;VQSLOD=3.7532;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,34:38:78.23:900,78,0	1/1:0,6:6:18.05:204,18,0	0/0:28,0:23:23.31:0,23,290	0/0:17,0:14:32.09:0,32,266	0/0:29,0:29:38.42:0,38,136	0/0:18,0:18:37.16:0,37,115	0/0:18,0:18:30.10:0,30,97	1/1:6,29:35:84.21:946,84,0	0/0:17,0:18:24.92:0,25,91	1/1:4,21:25:63.19:727,63,0	1/1:2,18:21:54.16:621,54,0	0/0:12,0:12:24.42:0,24,75	1/1:3,20:23:32.74:630,33,0	1/1:2,19:22:60.01:672,60,0	1/1:3,17:20:48.14:554,48,0	1/1:2,14:16:39.12:450,39,0	0/0:11,0:11:17.74:0,18,55	1/1:2,18:20:51.15:589,51,0	1/1:3,9:12:30.09:346,30,0	1/1:4,27:31:84.25:963,84,0	1/1:1,14:15:42.12:485,42,0	1/1:3,13:16:33.01:363,33,0	0/0:15,0:15:28.01:0,28,83	0/0:6,0:6:8.29:0,8,25	1/1:2,16:18:42.12:485,42,0	1/1:3,22:25:66.15:747,66,0	1/1:2,19:21:47.91:554,48,0	1/1:2,8:10:21.06:242,21,0
chr10	33416302	.	C	CG	1517.09	PASS	AB=0.738;AC=9;AF=0.161;AN=56;BaseQRankSum=-2.892;DP=535;FS=9.401;HRun=10;HaplotypeScore=107.0295;InbreedingCoeff=0.2105;MQ=75.05;MQ0=0;MQRankSum=-0.831;QD=9.85;ReadPosRankSum=-0.840;VQSLOD=1.8430;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:14,12:27:80.93:228,0,81	0/0:8,0:8:14.96:0,15,123	0/1:15,1:16:14.65:15,0,138	0/0:17,0:18:0.61:0,1,129	0/1:18,8:27:50.68:151,0,51	1/1:7,10:17:2.44:202,2,0	0/1:9,10:19:16.18:255,0,16	0/0:21,0:21:35.37:0,35,288	1/1:12,12:24:39.01:401,39,0	0/0:19,0:19:41.92:0,42,344	0/0:18,0:18:29.94:0,30,246	0/0:6,0:17:25.78:0,26,74	0/0:23,0:23:47.92:0,48,394	0/0:20,0:20:10.16:0,10,199	0/0:23,0:23:50.93:0,51,418	0/0:25,0:27:51.24:0,51,404	0/1:11,13:24:19.68:407,0,20	0/0:17,0:17:26.93:0,27,221	0/0:14,0:16:25.03:0,25,184	0/0:22,0:23:28.99:0,29,227	0/0:21,0:21:35.89:0,36,289	0/0:16,0:17:19.98:0,20,153	0/0:4,0:15:20.36:0,20,59	0/0:1,0:18:20.54:0,21,65	0/0:18,2:20:6.96:0,7,263	0/0:14,0:14:17.96:0,18,148	0/0:21,0:24:45:0,45,338	0/0:2,0:2:5.99:0,6,49
chr10	33416347	.	T	TACACTAGG	15484.57	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=3.053;DP=539;FS=1.684;HRun=0;HaplotypeScore=152.3445;InbreedingCoeff=0.9990;MQ=77.71;MQ0=0;MQRankSum=-16.230;QD=96.18;ReadPosRankSum=0.273;VQSLOD=5.5861;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:72.25:0,72,1963	0/0:12,0:12:30.05:0,30,716	0/0:12,0:12:33.11:0,33,924	0/0:17,0:17:39.83:0,40,950	1/1:6,20:29:60.21:2620,60,0	1/1:5,18:23:60.20:2440,60,0	1/1:7,9:17:45.09:1709,45,0	0/0:23,0:23:66.17:0,66,1632	1/1:6,15:23:63.22:2560,63,0	0/0:23,0:23:66.23:0,66,1833	0/0:22,0:22:66.21:0,66,1765	1/1:4,12:19:48.11:1946,48,0	0/0:21,0:21:57.18:0,57,1483	0/0:26,0:26:78.27:0,78,2148	0/0:25,0:25:75.25:0,75,1954	0/0:23,0:23:69.24:0,69,1894	1/1:10,7:20:39.13:1630,39,0	0/0:8,0:8:24.08:0,24,672	0/0:17,0:17:45.13:0,45,1125	0/0:18,0:18:54.14:0,54,1330	0/0:13,0:13:39.13:0,39,1081	0/0:24,0:24:69.22:0,69,1835	1/1:5,8:15:30.10:1250,30,0	1/1:4,11:15:36.01:1329,36,0	0/0:24,0:24:69.24:0,69,1889	0/0:16,0:16:45.15:0,45,1132	0/0:21,0:21:60.21:0,60,1623	0/0:8,0:8:24.08:0,24,587
chr10	33417100	.	G	GA	3709.37	PASS	AC=10;AF=0.185;AN=54;BaseQRankSum=-12.615;DP=575;FS=2.342;HRun=7;HaplotypeScore=50.4151;InbreedingCoeff=0.9901;MQ=77.04;MQ0=0;MQRankSum=-0.309;QD=28.98;ReadPosRankSum=2.704;VQSLOD=4.2442;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,102,965	0/0:7,0:7:18.03:0,18,174	0/0:16,0:16:36.02:0,36,339	0/0:16,0:16:41.12:0,41,353	1/1:3,37:40:99:1288,108,0	1/1:2,22:24:63.19:761,63,0	1/1:3,15:18:27.08:326,27,0	0/0:39,0:39:99:0,102,958	1/1:0,14:14:36.11:435,36,0	0/0:19,0:19:54.08:0,54,518	0/0:19,0:19:54.07:0,54,516	0/0:13,0:13:33.04:0,33,313	0/0:17,0:17:45.05:0,45,428	0/0:17,0:17:48.07:0,48,464	0/0:12,0:12:30.04:0,30,284	0/0:20,1:21:11.84:0,12,391	1/1:4,26:32:77.97:899,78,0	0/0:25,0:25:62.74:0,63,607	0/0:26,0:26:63.07:0,63,603	0/0:24,0:24:60.08:0,60,574	0/0:12,0:12:36.06:0,36,348	0/0:16,0:16:45.07:0,45,434	0/0:16,0:16:48.08:0,48,463	0/0:23,0:23:63.04:0,63,599	0/0:22,0:22:66.10:0,66,633	0/0:22,0:22:51.06:0,51,489	0/0:26,0:26:72.08:0,72,687	./.
chr10	33417848	.	A	AT	3606.43	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-11.895;DP=730;FS=2.240;HRun=8;HaplotypeScore=69.0450;InbreedingCoeff=0.9994;MQ=79.67;MQ0=0;MQRankSum=-1.620;QD=28.18;ReadPosRankSum=0.306;VQSLOD=4.1498;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,147,1344	0/0:20,0:20:48.02:0,48,439	0/0:25,0:26:47.42:0,47,423	0/0:18,0:18:38.78:0,39,337	1/1:2,28:31:81.20:919,81,0	1/1:1,19:20:54.16:623,54,0	1/1:4,17:21:23.68:527,24,0	0/0:39,0:39:84.01:0,84,758	1/1:2,22:24:60.18:692,60,0	0/0:20,0:21:56.06:0,56,500	0/0:24,0:24:69.04:0,69,631	0/0:29,0:29:81.04:0,81,741	0/0:24,0:24:65.94:0,66,581	0/0:24,1:25:31.73:0,32,536	0/0:17,0:17:48.01:0,48,435	0/0:23,0:23:63.03:0,63,577	1/1:3,28:32:75.06:845,75,0	0/0:20,0:20:50.99:0,51,460	0/0:21,0:21:51.01:0,51,463	0/0:34,0:34:93.04:0,93,851	0/0:22,0:22:60.02:0,60,549	0/0:26,0:26:66.02:0,66,601	0/0:28,0:28:75.02:0,75,682	0/0:21,0:21:51.01:0,51,463	0/0:29,0:29:69.01:0,69,628	0/0:33,0:33:93.04:0,93,847	0/0:37,0:37:99:0,102,922	0/0:15,0:15:38.76:0,39,356
chr10	33419180	.	A	AGTGTGT	3073.99	PASS	AB=1.000;AC=40;AF=0.769;AN=52;BaseQRankSum=-5.774;DP=554;FS=13.259;HRun=0;HaplotypeScore=141.9405;InbreedingCoeff=0.5060;MQ=54.43;MQ0=14;MQRankSum=3.015;QD=7.94;ReadPosRankSum=-3.283;VQSLOD=1.0955;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:24:15.02:205,15,0	1/1:7,0:7:3.01:58,3,0	./.	./.	0/0:15,0:21:15.05:0,15,198	0/0:20,0:26:12.04:0,12,154	0/0:21,0:27:3:0,3,27	1/1:23,0:23:0.89:2,1,0	0/0:12,0:18:15.05:0,15,209	1/1:16,0:16:12.93:304,13,0	1/1:12,0:12:2.89:42,3,0	1/1:17,0:17:8.99:203,9,0	0/1:19,0:19:27.92:84,0,28	1/1:10,6:17:3.01:95,3,0	1/1:11,0:21:12.04:152,12,0	1/1:16,5:23:6.02:133,6,0	0/0:28,0:31:9.03:0,9,120	1/1:9,0:9:3.01:84,3,0	1/1:15,0:15:5.05:76,5,0	1/1:17,0:17:6.02:127,6,0	1/1:40,0:39:15.05:360,15,0	1/1:19,3:23:3.01:95,3,0	1/1:14,0:14:6.02:130,6,0	1/1:25,0:25:23.92:432,24,0	1/1:19,3:24:7.27:176,7,0	1/1:18,0:18:21.95:404,22,0	1/1:12,0:15:7.69:62,8,0	0/1:7,0:7:0:0,0,0
chr10	33421116	.	C	CATG	374.77	PASS	AC=28;AF=0.778;AN=36;BaseQRankSum=6.013;DP=128;FS=46.192;HRun=0;HaplotypeScore=110.0770;InbreedingCoeff=0.5095;MQ=152.03;MQ0=3;MQRankSum=-4.161;QD=8.52;ReadPosRankSum=5.441;VQSLOD=0.7914;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:0,1:1:0.89:0,1,2	1/1:0,2:2:5.21:22,5,0	0/0:41,0:37:78.17:0,78,891	0/0:34,0:23:26.69:0,27,325	1/1:0,7:7:9.77:63,10,0	1/1:0,2:2:5.47:25,5,0	./.	./.	1/1:0,1:1:2.68:11,3,0	1/1:0,2:2:5.37:24,5,0	1/1:0,5:5:7.65:28,8,0	1/1:0,1:1:2.84:14,3,0	1/1:0,1:1:2.90:16,3,0	1/1:0,2:2:5.90:39,6,0	1/1:0,2:2:5.88:45,6,0	./.	./.	./.	./.	0/0:0,6:6:2.11:0,2,4	./.	1/1:0,3:3:6.73:44,7,0	1/1:0,6:6:8.57:31,9,0	./.	./.	1/1:0,4:4:11.35:56,11,0	1/1:0,6:6:10.46:74,10,0	./.
chr10	33421299	.	T	TA	105.84	PASS	AC=14;AF=0.500;AN=28;BaseQRankSum=3.572;DP=540;DS;FS=19.442;HRun=0;HaplotypeScore=48.6574;InbreedingCoeff=0.4956;MQ=32.01;MQ0=74;MQRankSum=1.302;QD=5.57;ReadPosRankSum=3.168;VQSLOD=1.5347;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	1/1:2,0:2:2.13:5,2,0	0/0:248,0:33:38.88:0,39,324	0/0:250,0:34:60.22:0,60,468	0/0:3,0:3:0.96:0,1,2	0/0:1,0:1:1.82:0,2,5	./.	./.	./.	1/1:3,3:6:11.40:107,11,0	1/1:2,1:3:1.25:3,1,0	1/1:2,0:2:2.94:18,3,0	1/1:2,0:2:2.96:19,3,0	./.	./.	./.	./.	./.	0/0:4,0:2:5.99:0,6,56	0/0:5,0:5:0.31:0,0,3	./.	./.	1/1:1,0:1:2.96:19,3,0	./.	1/1:2,1:3:5.50:39,6,0	0/0:4,0:4:0.01:0,0,0	./.	./.
chr10	33421301	.	T	TA	224.47	PASS	AC=16;AF=0.571;AN=28;BaseQRankSum=4.068;DP=540;DS;FS=1.067;HRun=0;HaplotypeScore=46.2929;InbreedingCoeff=0.5655;MQ=30.10;MQ0=75;MQRankSum=1.022;QD=8.02;ReadPosRankSum=2.768;VQSLOD=3.0965;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	1/1:0,2:2:5.78:31,6,0	0/0:247,2:29:34.92:0,35,275	0/0:248,0:37:39.49:0,39,342	1/1:0,3:3:6.01:62,6,0	0/0:1,0:1:1.82:0,2,5	./.	./.	./.	1/1:5,1:6:6.39:41,6,0	1/1:1,2:3:2.88:15,3,0	0/0:2,0:2:2.37:0,2,8	1/1:1,1:2:2.80:13,3,0	./.	./.	./.	./.	./.	0/0:4,0:2:5.98:0,6,55	1/1:0,5:5:8.92:80,9,0	./.	./.	0/0:1,0:1:1.82:0,2,5	./.	1/1:1,2:3:6.28:33,6,0	1/1:1,3:4:6.02:65,6,0	./.	./.
chr10	33421462	.	C	CA	4285.41	PASS	AB=0.975;AC=51;AF=0.944;AN=54;BaseQRankSum=0.274;DP=232;FS=109.317;HRun=0;HaplotypeScore=93.3180;InbreedingCoeff=0.4175;MQ=120.43;MQ0=5;MQRankSum=-7.509;QD=23.16;ReadPosRankSum=5.239;VQSLOD=0.7324;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,5:5:14.87:138,15,0	1/1:0,5:5:15.03:156,15,0	0/0:45,0:34:49.72:0,50,502	0/1:38,0:27:27.98:28,0,222	1/1:0,10:10:23.83:225,24,0	1/1:0,11:11:33.07:339,33,0	1/1:0,5:5:15.03:155,15,0	1/1:0,8:8:24.07:277,24,0	1/1:1,4:5:12.03:125,12,0	1/1:0,8:8:23.88:260,24,0	1/1:0,3:3:6.01:59,6,0	1/1:0,7:7:21.03:211,21,0	1/1:0,3:3:9.02:93,9,0	1/1:0,4:4:11.86:106,12,0	1/1:0,10:10:30.07:311,30,0	1/1:0,5:5:15.03:155,15,0	1/1:0,4:4:11.93:113,12,0	1/1:0,5:5:12.03:140,12,0	1/1:0,4:4:12.03:140,12,0	1/1:0,9:9:26.93:263,27,0	1/1:1,2:3:5.88:46,6,0	1/1:0,6:6:17.96:170,18,0	1/1:0,8:8:18.04:183,18,0	./.	1/1:0,4:4:12.03:123,12,0	1/1:0,4:4:12.03:136,12,0	1/1:0,8:8:24.06:265,24,0	1/1:0,2:2:6.02:67,6,0
chr10	33421469	.	C	CA	5746.44	PASS	AB=1.000;AC=53;AF=0.946;AN=56;BaseQRankSum=-0.475;DP=231;FS=102.632;HRun=0;HaplotypeScore=85.6886;InbreedingCoeff=0.3791;MQ=116.05;MQ0=4;MQRankSum=-8.288;QD=30.24;ReadPosRankSum=6.761;VQSLOD=-0.0140;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,5:6:15.03:190,15,0	1/1:0,5:5:15.05:206,15,0	0/0:40,0:30:6.44:0,6,473	0/1:36,0:25:10.19:10,0,236	1/1:0,10:10:23.96:318,24,0	1/1:0,11:11:33.11:454,33,0	1/1:0,5:5:15.05:206,15,0	1/1:0,8:8:24.04:267,24,0	1/1:1,5:6:15.05:209,15,0	1/1:0,8:8:23.99:278,24,0	1/1:0,3:3:9.03:117,9,0	1/1:1,7:8:24.08:328,24,0	1/1:2,3:5:12.04:161,12,0	1/1:2,4:6:12.02:149,12,0	1/1:0,10:10:30.10:413,30,0	1/1:0,5:5:15.05:207,15,0	1/1:0,4:4:12.03:144,12,0	1/1:0,5:5:15.05:184,15,0	1/1:0,4:4:12.03:144,12,0	1/1:0,9:9:27.08:358,27,0	1/1:0,3:3:9.02:110,9,0	1/1:0,6:6:18.05:238,18,0	1/1:0,8:8:24.08:323,24,0	1/1:0,1:1:3.01:35,3,0	1/1:0,4:4:12.04:164,12,0	1/1:0,4:4:12.03:140,12,0	1/1:0,8:8:24.08:317,24,0	1/1:0,2:2:6.02:77,6,0
chr10	33421512	.	TA	T	1334.54	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=3.116;DP=364;FS=2.611;HRun=2;HaplotypeScore=75.8064;InbreedingCoeff=0.9637;MQ=68.21;MQ0=0;MQRankSum=-1.071;QD=31.77;ReadPosRankSum=1.298;VQSLOD=3.5405;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:48.16:0,48,702	0/0:6,0:6:18.05:0,18,248	0/0:8,0:8:24.04:0,24,316	0/0:8,0:9:18.45:0,18,241	0/0:23,0:23:63.20:0,63,919	0/0:17,0:17:51.17:0,51,760	0/0:10,0:10:30.10:0,30,441	0/0:18,0:18:54.17:0,54,790	0/0:8,0:8:21.07:0,21,313	0/0:18,0:18:54.18:0,54,791	0/0:9,0:9:27.09:0,27,402	1/1:0,20:20:57.19:736,57,0	0/0:13,0:13:39.12:0,39,562	0/0:8,0:8:15.05:0,15,224	0/0:14,0:14:42.10:0,42,591	0/0:16,0:16:48.11:0,48,669	0/0:9,0:9:27.05:0,27,378	0/0:11,0:11:33.04:0,33,442	0/0:15,0:15:42.13:0,42,607	0/0:16,0:16:48.12:0,48,691	0/0:11,0:11:33.03:0,33,428	0/0:11,0:11:33.08:0,33,468	1/1:0,16:16:45.15:582,45,0	1/1:0,6:6:12.04:156,12,0	0/0:11,0:11:33.08:0,33,468	0/0:15,0:15:45.14:0,45,655	0/0:26,0:26:78.22:0,78,1141	0/0:4,0:4:12.01:0,12,156
chr10	33424424	.	G	GCACA	3615.32	PASS	AB=0.898;AC=35;AF=0.729;AN=48;BaseQRankSum=-4.474;DP=515;FS=4.102;HRun=0;HaplotypeScore=129.0886;InbreedingCoeff=0.1417;MQ=54.44;MQ0=20;MQRankSum=2.486;QD=9.82;ReadPosRankSum=1.444;VQSLOD=2.9550;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,2:16:6.02:142,6,0	1/1:3,4:8:8.77:150,9,0	./.	./.	0/0:9,0:20:0.47:0,0,1	0/0:17,0:23:6.78:0,7,58	0/1:19,0:20:13.18:13,0,22	1/1:23,0:22:2.99:23,3,0	./.	0/1:20,1:22:16.12:299,0,16	1/1:9,1:12:8.50:64,8,0	0/1:16,0:12:0:0,0,0	1/1:14,0:16:19.47:282,19,0	1/1:10,4:15:8.27:153,8,0	0/1:10,0:15:15.30:15,0,20	1/1:7,4:12:11.78:225,12,0	0/0:14,0:16:12.01:0,12,112	1/1:5,0:7:11.51:166,12,0	1/1:11,0:9:11.81:77,12,0	1/1:17,5:23:20.94:436,21,0	0/1:22,2:25:12.48:232,0,12	1/1:8,2:11:11.78:195,12,0	./.	1/1:22,0:21:5.98:46,6,0	1/1:23,0:26:17.52:199,18,0	1/1:20,3:22:7.14:332,7,0	0/1:22,5:28:31.30:503,0,31	0/1:6,1:7:40.86:65,0,41
chr10	33424490	.	TA	T	1120.05	PASS	AB=0.877;AC=14;AF=0.250;AN=56;BaseQRankSum=1.326;DP=638;FS=5.254;HRun=1;HaplotypeScore=147.7338;InbreedingCoeff=-0.0531;MQ=33.41;MQ0=24;MQRankSum=-2.999;QD=3.62;ReadPosRankSum=-0.362;VQSLOD=-0.0334;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:21:11.79:0,12,187	0/0:7,1:7:5.75:0,6,59	0/0:13,0:4:8.99:0,9,112	0/0:10,0:4:6.02:0,6,87	0/0:36,0:32:6.02:0,6,92	0/1:28,7:30:23.94:24,0,83	0/0:22,0:19:13.45:0,13,189	0/1:36,14:48:99:403,0,1355	0/0:18,1:18:5.55:0,6,89	0/1:25,3:20:99:107,0,601	0/0:19,3:15:3.01:0,3,46	0/1:15,2:15:0.32:0,0,1	0/0:17,4:20:15.02:0,15,166	0/0:18,4:19:3.48:0,3,47	0/0:27,5:26:2.91:0,3,45	0/0:24,1:20:10.22:0,10,98	0/0:18,0:17:14.86:0,15,225	0/1:12,0:11:10.04:10,0,321	0/1:18,1:13:2.75:3,0,516	0/1:20,7:24:27.51:28,0,109	0/0:13,1:12:8.41:0,8,137	0/1:21,2:19:26.66:27,0,171	1/1:11,4:15:6.63:50,7,0	1/1:12,2:13:5.47:47,5,0	0/0:25,4:23:6.02:0,6,92	0/1:21,8:24:99:421,0,315	0/1:36,4:32:99:145,0,452	0/0:13,0:10:11.87:0,12,161
chr10	33424511	.	AGAT	A	3938.52	PASS	AB=0.977;AC=39;AF=0.750;AN=52;BaseQRankSum=-0.553;DP=616;FS=10.484;HRun=0;HaplotypeScore=160.9224;InbreedingCoeff=-0.2073;MQ=33.14;MQ0=14;MQRankSum=7.022;QD=6.64;ReadPosRankSum=-2.613;VQSLOD=1.9040;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:24,4:24:22.01:136,0,22	1/1:8,0:7:6.02:92,6,0	./.	./.	1/1:39,0:34:20.99:321,21,0	1/1:31,0:26:13.25:269,13,0	1/1:20,0:18:4.64:52,5,0	0/1:50,0:47:8.65:9,0,1325	1/1:20,0:19:14.97:230,15,0	0/1:26,0:18:99:283,0,291	1/1:22,0:14:6.02:92,6,0	1/1:17,2:17:15.64:119,16,0	0/1:22,0:21:10.06:131,0,10	0/0:23,0:20:2.86:0,3,18	1/1:32,0:26:0.47:1,0,0	1/1:23,0:18:12:158,12,0	1/1:15,0:14:9.03:138,9,0	0/1:10,0:9:99:123,0,112	0/1:21,0:18:99:185,0,253	0/1:31,0:28:46.86:81,0,47	1/1:3,1:3:3:28,3,0	1/1:23,2:21:17.94:167,18,0	0/1:16,0:16:24.48:80,0,24	1/1:9,5:13:18.66:166,19,0	1/1:30,1:25:6.02:92,6,0	0/1:29,3:27:99:397,0,249	0/1:40,2:34:99:471,0,141	0/1:12,0:9:55.52:119,0,56
chr10	33424514	.	T	TA	4251.63	PASS	AB=0.701;AC=41;AF=0.788;AN=52;BaseQRankSum=-0.631;DP=613;FS=11.531;HRun=1;HaplotypeScore=150.3926;InbreedingCoeff=-0.3145;MQ=33.84;MQ0=15;MQRankSum=6.758;QD=6.94;ReadPosRankSum=-2.423;VQSLOD=0.3295;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:16,8:20:22.46:134,0,22	1/1:2,5:6:6.02:88,6,0	./.	./.	1/1:6,29:30:21.07:308,21,0	1/1:5,28:28:20.43:276,20,0	1/1:8,12:18:3.36:45,3,0	0/1:49,3:50:25.46:25,0,1358	1/1:2,19:20:15.05:223,15,0	0/1:15,12:19:99:321,0,226	1/1:8,14:14:9.03:131,9,0	1/1:16,4:18:16.50:125,17,0	0/1:6,14:19:13.20:127,0,13	1/1:7,14:19:2.04:6,2,0	1/1:14,18:26:2.84:25,3,0	1/1:4,19:18:11.99:152,12,0	1/1:2,14:15:9.02:132,9,0	0/1:5,4:8:99:127,0,99	0/1:11,9:17:99:228,0,246	0/1:11,19:27:32.91:78,0,33	1/1:4,1:3:3:28,3,0	1/1:14,11:21:20.95:211,21,0	0/1:13,4:17:18.88:117,0,19	1/1:10,4:13:20.38:178,20,0	1/1:11,20:25:5.94:90,6,0	0/1:17,16:28:99:442,0,204	0/1:21,22:35:93.23:518,0,93	0/1:4,8:9:14.33:117,0,14
chr10	33432857	.	CT	C	13958.29	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=18.396;DP=619;FS=3.566;HRun=1;HaplotypeScore=140.8163;InbreedingCoeff=0.9980;MQ=89.70;MQ0=0;MQRankSum=-5.921;QD=34.90;ReadPosRankSum=3.432;VQSLOD=4.5545;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,34:34:99:1302,102,0	1/1:0,8:8:21.07:265,21,0	0/0:26,0:26:75.03:0,75,1140	0/0:23,0:23:65.74:0,66,930	0/0:41,0:41:99:0,123,1893	0/0:20,0:20:57.18:0,57,887	0/0:14,0:14:42.14:0,42,671	1/1:0,23:23:66.21:854,66,0	0/0:15,0:15:45.15:0,45,716	1/1:0,28:28:84.21:1039,84,0	1/1:0,17:17:51.05:612,51,0	0/0:24,0:24:72.25:0,72,1149	1/1:1,19:20:48.15:612,48,0	1/1:1,23:24:63.13:767,63,0	1/1:0,25:25:72.23:915,72,0	1/1:0,22:22:57.18:722,57,0	0/0:24,0:24:72.25:0,72,1151	1/1:0,10:10:27.09:346,27,0	1/1:1,17:18:49.04:624,49,0	1/1:0,28:28:78.17:979,78,0	1/1:3,42:45:99:1532,123,0	1/1:0,14:14:33.11:430,33,0	0/0:14,0:14:39.13:0,39,623	0/0:18,0:18:54.18:0,54,863	1/1:0,23:23:57.18:725,57,0	1/1:0,23:23:69.22:894,69,0	1/1:0,32:32:87.28:1114,87,0	1/1:0,6:6:18.06:226,18,0
chr10	33434980	.	GA	G	12576.56	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=4.245;DP=615;FS=9.266;HRun=9;HaplotypeScore=65.5267;InbreedingCoeff=0.9925;MQ=79.30;MQ0=0;MQRankSum=-4.147;QD=22.78;ReadPosRankSum=4.597;VQSLOD=5.3575;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:84.23:0,84,959	1/1:1,9:10:27.01:247,27,0	0/0:17,0:17:29.83:0,30,282	0/0:13,0:13:17.91:0,18,172	1/1:2,22:24:34.42:569,34,0	1/1:1,22:23:63.03:577,63,0	1/1:3,11:14:30.01:275,30,0	1/1:3,23:27:68.07:610,68,0	1/1:0,15:15:45.02:412,45,0	1/1:4,27:31:81.02:735,81,0	1/1:1,20:22:62.07:555,62,0	1/1:2,16:18:45.02:412,45,0	1/1:2,21:23:60.02:549,60,0	1/1:1,21:22:60.03:549,60,0	1/1:1,0:28:48.89:144,49,0	1/1:0,16:16:45.02:412,45,0	1/1:1,21:22:57.03:522,57,0	1/1:4,18:22:51.02:467,51,0	1/1:2,18:21:56.07:500,56,0	1/1:4,29:33:84.04:769,84,0	1/1:0,9:9:24.01:220,24,0	1/1:1,27:28:72.03:659,72,0	1/1:5,27:32:72.03:659,72,0	1/1:3,16:19:45.02:412,45,0	1/1:0,32:32:96.05:879,96,0	1/1:3,21:24:63:566,63,0	1/1:3,27:30:78.04:714,78,0	1/1:0,7:7:18.01:165,18,0
chr10	33435236	.	GACACAC	G	2011.88	PASS	AB=0.906;AC=28;AF=0.583;AN=48;BaseQRankSum=2.352;DP=480;FS=0.000;HRun=0;HaplotypeScore=108.2253;InbreedingCoeff=0.6360;MQ=62.93;MQ0=7;MQRankSum=-2.223;QD=7.92;ReadPosRankSum=1.916;VQSLOD=2.1562;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:11:3.01:0,3,38	1/1:3,7:9:8.76:159,9,0	./.	./.	0/0:14,0:17:14.13:0,14,170	0/0:29,0:32:41.72:0,42,534	0/0:14,0:18:7.74:0,8,98	./.	0/1:10,1:13:48.61:49,0,84	1/1:16,1:16:14.67:164,15,0	1/1:19,1:20:8.68:133,9,0	0/0:14,0:14:9.03:0,9,279	1/1:7,6:14:6.02:102,6,0	1/1:10,3:13:9.03:181,9,0	0/0:17,0:20:18.04:0,18,353	1/1:7,15:24:24.08:426,24,0	0/0:10,0:16:9:0,9,99	1/1:14,0:14:3.59:39,4,0	1/1:11,0:11:3.01:50,3,0	1/1:12,5:18:9.03:162,9,0	0/1:13,0:13:14.68:33,0,15	1/1:17,1:19:9.83:109,10,0	0/0:22,0:22:36.08:0,36,875	0/0:17,0:20:21.07:0,21,485	1/1:19,2:21:11.85:181,12,0	1/1:13,5:18:14.85:164,15,0	1/1:23,1:26:13.82:242,14,0	./.
chr10	33435603	.	ACG	A	1101.96	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=7.724;DP=587;FS=1.187;HRun=0;HaplotypeScore=143.8054;InbreedingCoeff=0.7193;MQ=59.91;MQ0=11;MQRankSum=-5.541;QD=5.54;ReadPosRankSum=0.859;VQSLOD=3.3330;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:43,0:43:2.12:49,0,2	0/0:10,0:10:12.02:0,12,74	0/0:15,0:8:11.36:0,11,89	0/0:15,0:11:0.43:0,0,42	1/1:14,0:14:2.99:24,3,0	1/1:24,0:23:20.95:167,21,0	1/1:21,0:21:8.98:72,9,0	0/0:17,0:16:21.79:0,22,144	1/1:20,0:20:20.95:166,21,0	0/0:28,0:26:39.90:0,40,254	0/0:21,0:20:28.89:0,29,187	1/1:3,16:20:5.93:57,6,0	0/0:26,0:27:13.67:0,14,157	0/0:23,0:23:28.04:0,28,189	0/0:27,0:27:22.76:0,23,124	0/0:16,0:16:9.59:0,10,51	1/1:10,0:10:5.99:48,6,0	0/0:7,0:7:11.93:0,12,90	0/0:26,0:26:30.17:0,30,203	0/0:17,0:17:2.59:0,3,116	0/0:26,0:25:18.91:0,19,152	0/0:25,0:25:13.15:0,13,192	1/1:4,10:14:2.89:36,3,0	1/1:27,5:31:71.74:664,72,0	0/0:28,0:28:12.85:0,13,206	0/0:27,0:25:51.05:0,51,327	0/0:25,0:25:26.75:0,27,153	0/0:5,0:5:1.86:0,2,5
chr10	33435609	.	GCGCACACACACACACACACA	G	3474.21	PASS	AB=1.000;AC=12;AF=0.214;AN=56;BaseQRankSum=2.082;DP=555;FS=7.395;HRun=0;HaplotypeScore=252.8658;InbreedingCoeff=0.6065;MQ=53.30;MQ0=12;MQRankSum=-4.441;QD=23.96;ReadPosRankSum=3.067;VQSLOD=1.0648;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:42:11.91:0,12,621	0/0:10,0:10:5.28:0,5,268	0/0:15,0:5:11.37:0,11,91	0/0:11,0:7:0.43:0,0,42	1/1:0,15:15:3.01:170,3,0	1/1:0,25:25:21.07:1193,21,0	1/1:1,18:19:9.03:512,9,0	0/0:13,0:12:29.97:0,30,915	1/1:0,18:19:21.07:1172,21,0	0/0:24,0:22:62.91:0,63,1539	0/0:21,0:20:36.68:0,37,784	0/0:18,0:18:9.03:0,9,547	0/0:25,0:25:54.04:0,54,1261	0/1:20,0:20:12.64:13,0,767	0/0:23,0:23:45.04:0,45,945	0/0:12,0:12:21.05:0,21,375	1/1:0,11:11:6.02:341,6,0	0/0:6,0:6:12:0,12,273	0/0:22,0:22:59.77:0,60,1469	0/0:17,0:17:32.97:0,33,665	0/0:23,0:22:23.65:0,24,547	0/0:24,0:25:51.05:0,51,1078	0/0:15,0:15:10.34:0,10,555	0/1:36,0:34:72.87:73,0,3713	0/0:28,0:29:50.92:0,51,949	0/0:26,0:24:69.08:0,69,2046	0/0:27,0:26:50.93:0,51,1079	0/0:6,0:6:9.03:0,9,171
chr10	33435611	.	GCACACACACA	G	9597.87	PASS	AB=1.000;AC=43;AF=0.827;AN=52;BaseQRankSum=-0.406;DP=559;FS=2.407;HRun=0;HaplotypeScore=162.1397;InbreedingCoeff=0.6850;MQ=51.05;MQ0=12;MQRankSum=-5.421;QD=22.80;ReadPosRankSum=3.759;VQSLOD=4.1638;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:41:11.96:0,12,178	1/1:5,2:8:6.02:159,6,0	./.	./.	1/1:15,0:15:3.01:70,3,0	1/1:25,0:24:21.07:488,21,0	1/1:19,0:19:9.03:210,9,0	1/1:12,2:13:5.99:51,6,0	1/1:19,0:19:21.07:488,21,0	1/1:15,8:22:20.36:670,20,0	1/1:12,8:21:27.08:704,27,0	0/0:18,0:18:9.03:0,9,276	1/1:11,10:23:22.67:720,23,0	1/1:12,8:20:14.63:410,15,0	1/1:7,13:22:27.09:787,27,0	1/1:3,7:11:15.05:428,15,0	1/1:11,0:11:6.02:140,6,0	0/1:8,0:8:85.23:85,0,115	1/1:13,9:23:15.26:424,15,0	1/1:9,8:18:15.05:447,15,0	1/1:22,2:23:15.05:317,15,0	1/1:13,9:24:21.04:610,21,0	0/0:17,0:17:13.45:0,13,403	0/0:38,0:36:58.61:0,59,1742	1/1:15,16:32:23.80:648,24,0	1/1:15,11:25:30.05:636,30,0	1/1:9,16:25:30.10:857,30,0	1/1:0,4:6:9.03:249,9,0
chr10	33437167	.	A	AT	12907.65	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-10.528;DP=510;FS=0.000;HRun=7;HaplotypeScore=48.4181;InbreedingCoeff=0.9942;MQ=83.00;MQ0=0;MQRankSum=-5.153;QD=30.44;ReadPosRankSum=1.483;VQSLOD=5.0111;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,12:13:33.10:399,33,0	1/1:0,8:8:18.06:218,18,0	0/0:12,0:12:22.91:0,23,216	0/0:20,0:19:35.99:0,36,324	1/1:0,28:29:87.21:1021,87,0	1/1:3,20:23:48.15:580,48,0	1/1:2,7:9:18.06:217,18,0	1/1:3,18:21:54.12:616,54,0	1/1:2,11:13:33.06:382,33,0	1/1:2,20:22:63.18:744,63,0	1/1:2,24:26:72.19:854,72,0	0/0:13,0:13:33.04:0,33,315	1/1:2,17:19:45.14:544,45,0	1/1:1,16:17:48.15:580,48,0	1/1:2,15:17:39.12:471,39,0	1/1:2,13:15:39.12:471,39,0	1/1:1,18:19:51.16:616,51,0	1/1:3,11:14:33.10:397,33,0	1/1:1,18:19:54.12:625,54,0	1/1:3,30:33:90.23:1070,90,0	1/1:2,9:11:21.06:254,21,0	1/1:5,19:24:57.01:650,57,0	0/0:29,0:29:78.12:0,78,753	0/0:12,0:12:36.06:0,36,348	1/1:1,13:14:36.11:435,36,0	1/1:3,15:18:45.13:532,45,0	1/1:2,26:28:72.22:870,72,0	1/1:2,10:12:30.09:362,30,0
chr10	33437924	.	TAAG	T	1292.07	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=4.743;DP=495;FS=7.607;HRun=0;HaplotypeScore=88.2616;InbreedingCoeff=0.9856;MQ=76.55;MQ0=0;MQRankSum=-4.246;QD=40.38;ReadPosRankSum=2.892;VQSLOD=4.8328;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:69.24:0,69,1590	0/0:6,0:6:18.06:0,18,415	0/0:12,0:12:36.12:0,36,780	0/0:16,0:16:42.11:0,42,873	0/0:26,0:26:75.23:0,75,1608	0/0:21,0:21:60.19:0,60,1338	0/0:13,0:13:39.13:0,39,851	0/0:25,0:25:69.21:0,69,1490	0/0:20,0:20:60.21:0,60,1332	0/0:26,0:26:78.26:0,78,1730	0/0:12,0:12:36.12:0,36,830	1/1:1,13:14:36.02:614,36,0	0/0:15,0:15:45.15:0,45,1038	0/0:25,0:25:72.23:0,72,1574	0/0:17,0:17:51.17:0,51,1152	0/0:15,0:15:45.14:0,45,993	0/0:13,0:12:36.12:0,36,781	0/0:11,0:11:33.11:0,33,760	0/0:15,0:15:42.14:0,42,968	0/0:31,0:31:90.29:0,90,1999	0/0:20,0:20:51.18:0,51,1176	0/0:12,0:12:36.12:0,36,830	1/1:0,13:13:36.10:613,36,0	1/1:0,5:5:12.04:205,12,0	0/0:26,0:26:72.23:0,72,1583	0/0:25,0:25:72.24:0,72,1586	0/0:26,0:26:75.22:0,75,1610	0/0:12,0:12:36.11:0,36,785
chr10	33440269	.	TTG	T	1257.77	PASS	AB=0.788;AC=30;AF=0.577;AN=52;BaseQRankSum=1.021;DP=602;FS=8.985;HRun=0;HaplotypeScore=90.0680;InbreedingCoeff=0.5158;MQ=57.23;MQ0=9;MQRankSum=0.982;QD=3.66;ReadPosRankSum=0.836;VQSLOD=1.2053;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:24:11.99:0,12,102	1/1:3,3:7:8.81:78,9,0	./.	./.	0/0:21,0:21:17.99:0,18,180	0/0:19,0:24:12:0,12,105	0/0:21,0:28:17.11:0,17,219	0/0:26,0:27:3.34:0,3,20	0/0:15,0:18:11.71:0,12,122	1/1:25,4:29:11.15:118,11,0	1/1:19,4:22:6.02:64,6,0	1/1:20,0:25:14.12:70,14,0	0/0:12,0:16:8.98:0,9,91	1/1:14,5:19:6.45:54,6,0	1/1:21,9:32:17.50:137,17,0	0/1:15,7:22:23.12:166,0,23	0/0:16,0:24:15:0,15,147	1/1:14,4:18:12.03:129,12,0	1/1:19,2:20:3.01:32,3,0	1/1:20,5:26:14.87:141,15,0	0/0:41,0:40:0:0,0,0	1/1:16,5:20:6.01:64,6,0	0/1:18,0:20:0:0,0,0	1/1:8,0:12:2.84:14,3,0	1/1:17,5:24:17.71:157,18,0	0/1:17,6:23:8.92:121,0,9	1/1:12,1:13:3.01:32,3,0	0/1:5,4:9:35.12:55,0,35
chr10	33443020	.	A	AG	5147.41	PASS	AB=0.667;AC=51;AF=0.981;AN=52;BaseQRankSum=-1.732;DP=416;FS=3.522;HRun=0;HaplotypeScore=34.1076;InbreedingCoeff=-0.0708;MQ=26.88;MQ0=204;MQRankSum=0.192;QD=13.51;ReadPosRankSum=-0.785;VQSLOD=5.0752;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,24:14:26.94:368,27,0	1/1:0,9:6:8.86:133,9,0	./.	./.	1/1:2,18:10:12.04:179,12,0	1/1:1,11:5:3.01:37,3,0	1/1:1,6:5:11.97:161,12,0	1/1:6,15:8:24.08:383,24,0	1/1:1,16:6:9.03:132,9,0	1/1:0,19:10:27.09:431,27,0	1/1:0,21:18:30.10:426,30,0	1/1:0,11:8:6.02:95,6,0	1/1:0,13:6:11.90:137,12,0	1/1:2,14:9:3.01:48,3,0	1/1:0,16:6:6.02:73,6,0	1/1:0,14:8:12.04:191,12,0	1/1:0,9:7:12.04:181,12,0	0/1:2,2:3:0.54:80,0,1	1/1:3,5:3:9.03:144,9,0	1/1:0,22:13:27.09:420,27,0	1/1:1,4:2:3.01:48,3,0	1/1:2,19:8:6.02:95,6,0	1/1:0,16:10:12.04:180,12,0	1/1:1,19:13:11.95:150,12,0	1/1:0,19:16:30.10:456,30,0	1/1:0,18:10:30.09:457,30,0	1/1:0,15:6:2.76:47,3,0	1/1:0,3:2:6.02:96,6,0
chr10	33445260	.	CT	C	1699.17	PASS	AC=40;AF=0.769;AN=52;BaseQRankSum=1.704;DP=353;FS=8.183;HRun=11;HaplotypeScore=23.6466;InbreedingCoeff=0.7113;MQ=29.44;MQ0=154;MQRankSum=0.999;QD=6.99;ReadPosRankSum=2.089;VQSLOD=0.2000;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:14:23.89:0,24,205	1/1:0,6:4:8.99:74,9,0	./.	./.	0/0:17,1:9:8.02:0,8,59	0/0:18,1:11:6.02:0,6,64	0/0:4,0:2:3.01:0,3,32	1/1:8,8:3:8.95:69,9,0	0/0:12,0:9:15:0,15,148	1/1:2,15:11:26.94:218,27,0	1/1:2,10:8:8.99:74,9,0	1/1:1,10:6:8.98:74,9,0	1/1:3,7:6:8.98:74,9,0	1/1:6,7:7:11.97:98,12,0	1/1:3,6:7:5.98:49,6,0	1/1:0,7:4:5.99:49,6,0	0/0:14,2:5:12.03:0,12,128	1/1:2,5:5:8.99:74,9,0	1/1:2,5:5:8.98:74,9,0	1/1:2,13:6:8.88:74,9,0	1/1:3,7:10:14.98:123,15,0	1/1:3,7:7:11.96:98,12,0	1/1:7,9:9:2.99:25,3,0	1/1:2,10:10:14.02:105,14,0	1/1:5,8:8:11.98:98,12,0	1/1:5,16:12:20.93:169,21,0	1/1:3,17:12:23.95:197,24,0	1/1:2,6:8:5.98:49,6,0
chr10	33495634	.	C	CA	331.77	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=0.640;DP=507;FS=0.000;HRun=7;HaplotypeScore=39.1038;InbreedingCoeff=0.6227;MQ=43.38;MQ0=61;MQRankSum=-0.981;QD=15.08;ReadPosRankSum=-0.537;VQSLOD=2.4089;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,21:19:36.11:426,36,0	0/0:8,0:5:15.02:0,15,145	0/0:16,0:1:3:0,3,29	0/0:10,0:1:3:0,3,29	0/0:31,0:31:69.10:0,69,665	0/0:12,0:12:27.03:0,27,255	0/0:10,0:9:14.98:0,15,135	0/0:19,0:1:3:0,3,29	0/0:14,0:12:27.04:0,27,261	0/0:23,0:19:51.08:0,51,492	0/0:29,0:26:63.10:0,63,608	0/0:13,0:13:36.06:0,36,347	0/0:16,0:15:33.05:0,33,318	0/0:18,0:17:39.06:0,39,376	0/0:14,0:12:33.05:0,33,315	0/0:10,0:10:24.04:0,24,232	0/0:25,0:22:48.07:0,48,462	0/0:22,0:21:36.06:0,36,348	0/0:21,0:9:27.04:0,27,261	0/0:26,0:23:60.09:0,60,579	0/0:12,0:12:27.04:0,27,261	0/0:18,0:17:41.80:0,42,403	0/0:15,0:15:27.04:0,27,260	0/0:13,0:12:15.02:0,15,145	0/0:23,0:21:60.10:0,60,578	0/0:25,0:22:66.11:0,66,637	0/0:30,0:27:63.09:0,63,607	0/0:12,0:12:27.04:0,27,261
chr10	33496793	.	CA	C	686.13	PASS	AB=0.667;AC=5;AF=0.089;AN=56;BaseQRankSum=6.952;DP=607;FS=8.610;HRun=11;HaplotypeScore=63.6399;InbreedingCoeff=0.6919;MQ=52.18;MQ0=16;MQRankSum=-6.913;QD=13.72;ReadPosRankSum=-0.132;VQSLOD=3.1688;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:28:29.39:0,29,216	0/0:12,0:12:30.08:0,30,320	0/0:31,0:1:3.01:0,3,32	0/0:35,0:7:15.03:0,15,152	0/0:29,1:30:27.33:0,27,463	0/0:6,0:6:12.03:0,12,128	0/0:11,0:11:30.08:0,30,320	0/0:27,0:23:47.90:0,48,473	0/0:21,0:20:39.09:0,39,410	0/0:31,0:27:69.01:0,69,718	0/0:19,0:18:27.05:0,27,280	1/1:4,16:20:41.93:344,42,0	0/0:20,0:20:51.10:0,51,529	0/0:17,2:17:11.32:0,11,283	0/0:26,0:26:72.17:0,72,762	0/0:19,0:19:39.09:0,39,410	0/0:15,0:16:33.07:0,33,345	0/0:22,1:23:48.05:0,48,484	0/0:26,0:22:53.80:0,54,538	0/0:19,0:21:41.80:0,42,410	0/0:13,1:14:8.40:0,8,283	0/0:28,1:28:29.50:0,29,513	1/1:0,18:18:41.95:345,42,0	0/1:6,6:11:11.01:126,0,11	0/0:13,0:14:14.87:0,15,142	0/0:22,0:23:62.94:0,63,623	0/0:30,1:32:61.18:0,61,817	0/0:20,0:18:36.08:0,36,377
chr10	33501147	.	C	CT	638.88	PASS	AC=26;AF=1.000;AN=26;DP=41;FS=0.000;HRun=1;HaplotypeScore=9.9143;InbreedingCoeff=-0.1176;MQ=71.91;MQ0=5;QD=17.75;VQSLOD=3.5557;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,4:3:6.02:90,6,0	./.	1/1:9,0:2:5.93:60,6,0	./.	./.	1/1:0,1:1:3.01:45,3,0	./.	1/1:2,2:4:11.96:131,12,0	1/1:1,0:1:2.96:19,3,0	1/1:1,1:1:3.01:45,3,0	./.	1/1:0,1:1:3.01:45,3,0	1/1:1,1:1:2.37:8,2,0	1/1:0,3:2:6.02:90,6,0	1/1:0,3:2:3.01:45,3,0	1/1:0,3:3:3.01:45,3,0	1/1:0,1:1:3.01:45,3,0	./.	1/1:1,1:1:3.01:45,3,0	./.	./.	./.	./.	./.	./.	./.	./.	./.
chr10	33512887	.	A	AGGG	2981.97	PASS	AB=1.000;AC=50;AF=0.893;AN=56;BaseQRankSum=2.703;DP=357;FS=3.511;HRun=10;HaplotypeScore=104.3399;InbreedingCoeff=0.3233;MQ=67.53;MQ0=1;MQRankSum=-3.194;QD=9.78;ReadPosRankSum=0.476;VQSLOD=0.5083;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:61.19:0,61,465	1/1:4,0:4:6.01:63,6,0	0/1:11,0:9:33.69:34,0,39	0/1:8,0:7:7.41:7,0,78	1/1:6,0:6:11.66:89,12,0	1/1:16,0:16:34.66:206,35,0	1/1:23,0:23:54.64:292,55,0	1/1:7,0:7:3.01:42,3,0	1/1:17,0:17:31.68:181,32,0	1/1:6,2:9:18.43:192,18,0	1/1:6,0:6:3.01:54,3,0	1/1:3,0:12:19.17:139,19,0	1/1:8,2:10:6.02:92,6,0	1/1:8,0:8:1.58:23,2,0	0/0:16,0:16:31.59:0,32,163	1/1:10,0:10:8.99:97,9,0	1/1:26,0:26:57.41:299,57,0	1/1:8,0:11:12.02:137,12,0	1/1:9,0:12:9.02:97,9,0	1/1:6,0:6:3:25,3,0	1/1:25,0:26:4.63:49,5,0	1/1:5,0:5:6.02:91,6,0	1/1:5,0:7:6.50:45,6,0	1/1:6,0:33:62.27:465,62,0	1/1:6,2:8:3.01:38,3,0	1/1:5,0:5:6.02:76,6,0	1/1:7,1:9:12.01:174,12,0	1/1:2,1:5:6.02:113,6,0
chr10	33512890	.	G	GGA	4157.90	PASS	AB=1.000;AC=30;AF=0.536;AN=56;BaseQRankSum=-1.370;DP=329;FS=10.876;HRun=0;HaplotypeScore=80.0384;InbreedingCoeff=-0.0221;MQ=71.22;MQ0=1;MQRankSum=-0.137;QD=17.32;ReadPosRankSum=6.070;VQSLOD=2.6742;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:92.98:0,93,1124	1/1:3,0:3:2.62:17,3,0	0/0:12,0:9:10.80:0,11,165	0/1:12,0:9:14.66:15,0,195	1/1:0,8:8:14.98:233,15,0	1/1:2,15:17:36.12:620,36,0	1/1:1,25:26:56.87:982,57,0	0/1:7,0:7:8.40:8,0,17	1/1:1,13:16:33.11:562,33,0	0/1:10,0:10:11.37:45,0,11	0/1:5,0:5:3.61:4,0,61	1/1:10,0:10:10.45:102,10,0	0/1:5,0:5:17.03:25,0,17	0/0:4,0:4:3.35:0,3,16	0/0:15,0:15:39.10:0,39,439	0/1:4,0:4:16.16:29,0,16	1/1:1,28:29:60.20:1035,60,0	0/1:7,0:7:8.97:33,0,9	0/1:10,0:9:54.28:61,0,54	0/0:6,0:6:3.47:0,3,27	0/0:21,0:21:19.83:0,20,159	0/1:5,0:5:20.49:20,0,35	0/1:9,0:8:7.07:7,0,44	0/1:32,0:32:45.83:283,0,46	0/1:6,0:6:12.80:13,0,21	0/1:6,0:6:21.06:21,0,64	1/1:6,0:6:5.34:37,5,0	0/1:7,0:7:6.73:7,0,21
chr10	33512897	.	GC	G	2249.13	PASS	AB=1.000;AC=43;AF=0.768;AN=56;BaseQRankSum=1.240;DP=295;FS=5.296;HRun=2;HaplotypeScore=55.0066;InbreedingCoeff=0.5882;MQ=71.79;MQ0=1;MQRankSum=-0.939;QD=10.09;ReadPosRankSum=-0.364;VQSLOD=1.2328;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:29:76.47:76,0,86	1/1:2,0:2:5.16:25,5,0	0/0:9,0:6:10.95:0,11,70	0/0:13,0:11:11.49:0,11,175	1/1:8,0:8:14.96:67,15,0	1/1:11,1:12:26.65:128,27,0	1/1:23,0:23:54.18:266,54,0	1/1:11,0:11:32.65:248,33,0	1/1:11,0:11:30.18:138,30,0	1/1:11,0:11:19.81:126,20,0	1/1:2,0:2:2.08:16,2,0	0/0:12,0:12:25.71:0,26,187	1/1:3,0:3:5.07:40,5,0	1/1:2,0:2:2.22:7,2,0	1/1:0,15:15:33.11:426,33,0	0/1:4,0:4:1.96:18,0,2	1/1:25,0:25:54.44:252,54,0	1/1:6,0:6:2:9,2,0	1/1:10,0:9:15.68:96,16,0	1/1:5,0:5:8.09:42,8,0	1/1:15,0:15:22.41:163,22,0	1/1:6,0:6:7.50:50,7,0	0/0:5,0:5:11.83:0,12,95	0/0:33,0:33:83.65:0,84,643	1/1:7,0:7:10.54:79,11,0	1/1:5,0:5:11.68:91,12,0	0/1:5,0:5:2.20:2,0,9	1/1:6,0:6:7.98:56,8,0
chr10	33513505	.	T	TA	987.07	PASS	AB=0.929;AC=7;AF=0.125;AN=56;BaseQRankSum=-6.191;DP=419;FS=3.168;HRun=8;HaplotypeScore=44.2150;InbreedingCoeff=0.8050;MQ=77.63;MQ0=0;MQRankSum=-0.503;QD=20.14;ReadPosRankSum=1.075;VQSLOD=3.3916;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:45.02:0,45,412	0/0:4,0:4:12.01:0,12,110	0/1:12,1:11:22.67:23,0,110	0/0:12,0:12:10.15:0,10,90	0/0:24,0:24:72.04:0,72,659	0/0:17,0:17:45.01:0,45,407	0/0:6,0:6:18.01:0,18,164	0/0:22,0:22:53.91:0,54,477	0/0:9,0:9:27.01:0,27,247	0/0:25,0:25:72.02:0,72,652	0/0:17,0:17:45.02:0,45,412	1/1:0,8:8:24.07:277,24,0	0/0:12,0:12:33:0,33,298	0/0:10,0:10:21.01:0,21,192	0/0:16,0:16:48.01:0,48,435	0/0:15,0:14:32.98:0,33,295	0/0:13,0:13:33.01:0,33,302	0/0:15,0:15:39.01:0,39,356	0/0:20,0:20:51.01:0,51,462	0/0:20,0:20:60.03:0,60,549	0/0:6,0:6:17.99:0,18,159	0/0:8,0:8:18.01:0,18,165	1/1:2,19:21:57.15:647,57,0	1/1:1,6:7:17.92:188,18,0	0/0:13,0:13:39.01:0,39,350	0/0:29,0:29:81.04:0,81,741	0/0:28,0:28:75.02:0,75,686	0/0:13,0:13:36.02:0,36,329
chr10	33514122	.	G	GAA	1491.02	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-6.628;DP=497;FS=6.954;HRun=10;HaplotypeScore=91.8117;InbreedingCoeff=0.8355;MQ=88.64;MQ0=0;MQRankSum=-0.926;QD=29.24;ReadPosRankSum=0.654;VQSLOD=3.6792;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:33:62.79:0,63,692	0/0:7,0:7:18.03:0,18,183	0/0:19,0:21:38.97:0,39,350	0/0:18,0:18:9.47:0,9,175	0/0:21,0:23:51.86:0,52,580	0/0:18,0:17:48.07:0,48,482	0/0:10,0:10:24.03:0,24,237	0/0:29,0:30:41.62:0,42,408	0/0:16,0:16:42.05:0,42,421	0/0:17,0:18:47.82:0,48,469	0/0:20,0:20:50.83:0,51,493	1/1:1,10:11:24.08:353,24,0	0/0:13,0:13:39.09:0,39,396	0/0:22,0:22:54:0,54,549	0/0:10,0:10:30.07:0,30,305	0/0:9,0:9:2.02:0,2,219	0/0:18,0:18:48.08:0,48,488	0/0:17,0:17:36.02:0,36,366	0/0:16,0:16:33.04:0,33,335	0/0:22,0:23:47.72:0,48,540	0/0:10,0:9:0.66:0,1,190	0/0:19,0:19:36:0,36,366	1/1:1,21:24:55.07:743,55,0	1/1:2,14:16:36.12:537,36,0	0/0:23,0:24:44.77:0,45,504	0/0:14,0:15:29.76:0,30,286	0/0:28,0:28:66.10:0,66,671	0/0:8,0:8:14.99:0,15,152
chr10	33514580	.	CT	C	190.34	PASS	AB=0.720;AC=1;AF=0.018;AN=56;BaseQRankSum=4.392;DP=667;FS=10.893;HRun=1;HaplotypeScore=75.6201;InbreedingCoeff=-0.0183;MQ=97.17;MQ0=0;MQRankSum=-4.238;QD=10.57;ReadPosRankSum=-0.444;VQSLOD=0.2811;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,108,1719	0/0:10,0:10:30.10:0,30,480	0/0:34,0:34:99:0,99,1543	0/0:32,0:33:99:0,99,1468	0/0:14,0:14:42.14:0,42,669	0/0:28,0:28:81.26:0,81,1271	0/0:25,0:25:75.26:0,75,1199	0/0:40,0:40:99:0,114,1759	0/0:29,0:29:87.30:0,87,1384	0/0:23,0:23:66.22:0,66,1051	0/0:24,0:24:72.25:0,72,1148	0/0:22,0:22:66.23:0,66,1055	0/0:25,0:25:72.25:0,72,1147	0/0:16,0:16:48.16:0,48,765	0/0:23,0:23:69.19:0,69,1032	0/0:16,0:16:48.16:0,48,765	0/1:6,7:18:39.45:265,0,39	0/0:20,0:20:57.13:0,57,837	0/0:29,0:29:87.28:0,87,1365	0/0:23,0:23:60.20:0,60,959	0/0:30,0:30:87.30:0,87,1390	0/0:16,0:16:48.16:0,48,768	0/0:16,0:16:48.14:0,48,721	0/0:22,0:22:66.19:0,66,1001	0/0:17,0:17:51.17:0,51,816	0/0:28,0:28:84.26:0,84,1278	0/0:42,0:42:99:0,126,2010	0/0:6,0:6:18.06:0,18,288
chr10	33514581	.	T	TACAAAATACAAATACA	2336.93	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.590;DP=664;FS=7.667;HRun=0;HaplotypeScore=287.3114;InbreedingCoeff=0.9914;MQ=96.38;MQ0=0;MQRankSum=-5.846;QD=129.83;ReadPosRankSum=0.337;VQSLOD=2.0036;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,108,4464	0/0:10,0:10:30.10:0,30,1391	0/0:34,0:34:99:0,99,3194	0/0:31,0:31:89.96:0,90,2728	0/0:14,0:14:42.14:0,42,1720	0/0:27,0:27:78.27:0,78,3405	0/0:25,0:25:75.24:0,75,3258	0/0:41,0:41:99:0,111,3740	0/0:29,0:29:87.27:0,87,3575	0/0:24,0:24:66.23:0,66,2788	0/0:24,0:24:72.24:0,72,3050	0/0:23,0:23:66.23:0,66,3159	0/0:24,0:24:72.23:0,72,3171	0/0:16,0:16:48.16:0,48,2071	0/0:22,0:22:66.19:0,66,2707	0/0:16,0:16:48.16:0,48,1984	1/1:13,4:18:40.21:2432,40,0	0/0:18,0:18:51.13:0,51,2155	0/0:29,0:29:87.25:0,87,3535	0/0:22,0:22:60.21:0,60,2544	0/0:30,0:30:87.30:0,87,3779	0/0:16,0:16:48.15:0,48,2077	0/0:16,0:16:45.14:0,45,1859	0/0:22,0:22:66.18:0,66,2679	0/0:18,0:18:51.18:0,51,2234	0/0:28,0:28:81.24:0,81,3236	0/0:43,0:43:99:0,126,5559	0/0:6,0:6:18.04:0,18,758
chr10	33515998	.	TTGTGTG	T	1052.93	PASS	AB=0.937;AC=37;AF=0.804;AN=46;BaseQRankSum=0.776;DP=491;FS=1.894;HRun=0;HaplotypeScore=134.5739;InbreedingCoeff=0.0350;MQ=61.16;MQ0=6;MQRankSum=-0.095;QD=2.77;ReadPosRankSum=1.004;VQSLOD=2.6338;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:21,0:21:10.92:11,0,153	./.	./.	./.	1/1:15,6:21:2.65:20,3,0	1/1:16,5:22:9.01:144,9,0	0/0:10,0:10:0:0,0,0	0/0:32,0:32:0.47:0,0,1	1/1:11,0:11:2.65:24,3,0	0/1:19,0:18:0.67:23,0,1	1/1:17,2:19:11.77:73,12,0	1/1:3,0:10:6.02:84,6,0	1/1:8,1:9:3.01:60,3,0	1/1:7,6:13:9.03:180,9,0	1/1:17,0:23:5.81:84,6,0	1/1:13,3:16:3.01:60,3,0	0/1:16,0:18:9.16:87,0,9	1/1:27,0:26:5.83:44,6,0	1/1:16,1:17:7.73:112,8,0	1/1:23,6:30:5.94:41,6,0	0/1:23,0:23:10.38:10,0,54	./.	1/1:11,0:18:0.47:1,0,0	0/1:8,0:11:0.10:0,0,0	1/1:20,7:27:2.94:18,3,0	./.	1/1:12,7:19:2.49:60,2,0	1/1:5,0:5:2.90:16,3,0
chr10	33516221	.	AT	A	9923.30	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=2.904;DP=423;FS=0.000;HRun=7;HaplotypeScore=76.2522;InbreedingCoeff=0.9674;MQ=75.17;MQ0=0;MQRankSum=-3.655;QD=27.26;ReadPosRankSum=1.796;VQSLOD=5.5012;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,13:15:36.07:366,36,0	1/1:1,8:9:24.05:245,24,0	0/0:13,0:13:25.63:0,26,323	0/0:8,0:8:14.22:0,14,141	1/1:4,17:21:48.10:489,48,0	1/1:3,18:21:54.12:550,54,0	1/1:0,3:3:9.02:92,9,0	1/1:6,19:25:57.13:581,57,0	1/1:2,15:17:45.10:459,45,0	1/1:1,23:24:66.15:673,66,0	1/1:1,25:26:72.16:734,72,0	0/0:10,0:10:27.09:0,27,340	1/1:2,11:13:36.06:360,36,0	1/1:0,14:14:39.09:398,39,0	1/1:0,8:8:24.05:245,24,0	1/1:0,10:10:30.07:306,30,0	1/1:1,9:10:24.05:245,24,0	1/1:1,15:16:48.11:487,48,0	1/1:2,13:15:42.09:428,42,0	1/1:1,23:24:69.16:703,69,0	1/1:3,4:7:12.03:122,12,0	1/1:4,14:18:48.10:488,48,0	0/0:21,0:21:54.17:0,54,678	0/0:7,0:7:15.05:0,15,189	1/1:2,19:21:60.13:611,60,0	1/1:4,19:23:63.13:636,63,0	1/1:0,17:17:51.12:520,51,0	1/1:1,6:7:18.04:184,18,0
chr10	33516266	.	A	AT	11993.96	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-2.586;DP=436;FS=18.366;HRun=7;HaplotypeScore=62.7271;InbreedingCoeff=0.8910;MQ=70.97;MQ0=0;MQRankSum=-6.559;QD=29.04;ReadPosRankSum=2.238;VQSLOD=3.3955;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,14:18:38.95:431,39,0	1/1:4,5:9:24.06:278,24,0	0/0:12,0:12:27.02:0,27,254	0/0:11,0:11:18:0,18,170	1/1:4,25:29:57.12:659,57,0	1/1:3,14:17:39.05:453,39,0	1/1:1,7:8:21.06:254,21,0	1/1:2,22:24:66.19:786,66,0	1/1:2,15:17:45.07:523,45,0	1/1:6,12:18:39.11:462,39,0	1/1:4,21:25:62.88:660,63,0	1/1:1,10:11:30.09:362,30,0	1/1:5,10:15:30.09:362,30,0	1/1:1,15:16:42.06:487,42,0	1/1:2,4:6:15.03:170,15,0	1/1:4,7:11:24.06:278,24,0	1/1:2,6:8:15.93:182,16,0	1/1:3,3:6:12.02:132,12,0	1/1:4,16:20:48.15:580,48,0	1/1:1,29:30:87.12:1000,87,0	1/1:1,4:5:5.93:53,6,0	1/1:2,13:15:39.12:471,39,0	1/1:1,21:22:60.18:725,60,0	1/1:1,6:7:15.05:181,15,0	1/1:1,24:25:63.19:759,63,0	1/1:3,21:24:69.18:808,69,0	1/1:2,21:23:69.13:794,69,0	1/1:1,3:4:12.04:145,12,0
chr10	33517731	.	A	AT	19451.67	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-7.084;DP=555;FS=18.009;HRun=3;HaplotypeScore=46.6614;InbreedingCoeff=0.9967;MQ=68.89;MQ0=0;MQRankSum=-7.551;QD=36.91;ReadPosRankSum=4.937;VQSLOD=2.8889;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,25:26:72.24:1003,72,0	1/1:0,14:14:42.14:588,42,0	0/0:20,0:20:47.33:0,47,596	0/0:8,0:8:21.06:0,21,252	1/1:2,24:26:66.18:897,66,0	1/1:0,14:14:39.13:546,39,0	1/1:2,20:22:48.16:672,48,0	1/1:4,31:35:93.28:1251,93,0	1/1:0,19:19:51.17:714,51,0	1/1:2,26:27:78.26:1091,78,0	1/1:4,28:32:87.21:1193,87,0	1/1:1,13:14:36.12:504,36,0	1/1:0,15:15:42.14:588,42,0	1/1:0,13:13:39.13:546,39,0	1/1:1,11:12:33.11:462,33,0	1/1:2,11:13:33.11:462,33,0	1/1:2,13:15:33.11:462,33,0	1/1:0,12:12:30.10:420,30,0	1/1:2,18:20:48.09:615,48,0	1/1:0,29:29:84.28:1176,84,0	1/1:0,17:17:51.17:714,51,0	1/1:2,17:19:45.11:608,45,0	1/1:0,27:27:78.18:1067,78,0	1/1:2,15:17:36.12:504,36,0	1/1:3,21:24:63.21:882,63,0	1/1:1,28:29:84.26:1142,84,0	1/1:1,23:24:66.22:924,66,0	1/1:0,11:11:30.10:420,30,0
chr10	33518817	.	C	CT	4565.68	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-11.492;DP=610;FS=0.778;HRun=6;HaplotypeScore=56.6861;InbreedingCoeff=0.9643;MQ=69.03;MQ0=0;MQRankSum=0.828;QD=33.82;ReadPosRankSum=0.111;VQSLOD=4.6048;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,25:26:72.23:905,72,0	0/0:11,0:11:33.05:0,33,323	0/0:12,0:12:16.54:0,17,145	0/0:10,0:9:8.69:0,9,69	1/1:2,23:25:69.22:868,69,0	1/1:0,28:28:78.25:981,78,0	1/1:2,17:19:48.15:604,48,0	0/0:38,0:38:90.20:0,90,918	1/1:0,19:19:54.17:679,54,0	0/0:35,0:35:90.20:0,90,914	0/0:29,0:29:81.18:0,81,826	0/0:20,0:20:57.12:0,57,575	0/0:21,0:21:51.11:0,51,520	0/0:11,0:11:33.08:0,33,337	0/0:13,0:13:33.06:0,33,330	0/0:25,0:25:69.14:0,69,697	1/1:3,15:18:42.13:528,42,0	0/0:20,0:20:54.08:0,54,541	0/0:23,0:23:63.11:0,63,629	0/0:36,0:36:96.20:0,96,972	0/0:17,0:17:42.09:0,42,429	0/0:26,0:26:69.11:0,69,690	0/0:31,0:31:72.15:0,72,734	0/0:12,0:12:30.05:0,30,299	0/0:29,0:29:75.16:0,75,764	0/0:28,0:28:81.18:0,81,826	0/0:25,0:25:69.11:0,69,687	0/0:2,0:2:6.01:0,6,61
chr10	33520648	.	CAGAT	C	3816.65	PASS	AB=0.741;AC=27;AF=0.540;AN=50;BaseQRankSum=1.846;DP=527;FS=19.526;HRun=0;HaplotypeScore=98.4187;InbreedingCoeff=0.8025;MQ=69.44;MQ0=3;MQRankSum=0.327;QD=14.68;ReadPosRankSum=1.750;VQSLOD=2.0212;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:20:4.25:0,4,83	1/1:7,5:12:9.03:137,9,0	./.	./.	1/1:15,16:31:45.15:686,45,0	0/0:21,0:21:27.09:0,27,628	0/0:14,0:14:9.03:0,9,209	./.	0/0:19,0:19:33.08:0,33,660	1/1:10,8:19:27.08:389,27,0	1/1:9,6:16:18.05:257,18,0	0/0:17,0:22:30.10:0,30,516	0/0:12,0:12:21.07:0,21,489	1/1:17,3:20:9.03:137,9,0	0/0:10,0:14:9.03:0,9,153	1/1:6,6:11:12.04:183,12,0	0/0:17,0:24:21.07:0,21,375	1/1:14,2:16:2.99:46,3,0	1/1:6,3:9:9.03:133,9,0	1/1:17,15:32:33.11:495,33,0	1/1:12,3:15:9.03:137,9,0	0/1:13,7:20:48.70:254,0,49	0/0:28,0:28:21.07:0,21,484	0/0:5,0:10:15.05:0,15,262	0/0:12,0:16:27.09:0,27,558	1/1:20,10:30:30.10:458,30,0	1/1:11,9:20:14.88:229,15,0	1/1:2,6:8:18.06:275,18,0
chr10	33520765	.	G	GA	1107.78	PASS	AB=0.833;AC=7;AF=0.125;AN=56;BaseQRankSum=-7.958;DP=470;FS=2.266;HRun=6;HaplotypeScore=43.9712;InbreedingCoeff=0.8494;MQ=66.71;MQ0=0;MQRankSum=-1.980;QD=24.62;ReadPosRankSum=-0.122;VQSLOD=2.9326;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:24.05:0,24,244	0/0:9,0:9:24.05:0,24,245	0/0:13,0:12:24.05:0,24,244	0/1:4,0:5:6.63:7,0,52	0/0:34,0:34:90.19:0,90,911	0/0:15,0:15:42.08:0,42,422	0/0:10,0:10:27.03:0,27,267	0/0:24,0:24:51.10:0,51,520	0/0:20,0:20:57.13:0,57,582	0/0:27,0:27:72.16:0,72,735	0/0:25,0:25:66.14:0,66,673	1/1:2,9:11:24.08:302,24,0	0/0:10,0:10:30.07:0,30,306	0/0:15,0:15:42.10:0,42,429	0/0:17,0:17:48.11:0,48,490	0/0:10,0:10:27.06:0,27,276	0/0:25,0:25:72.16:0,72,735	0/0:7,0:7:18.04:0,18,184	0/0:19,0:19:54.12:0,54,551	0/0:33,0:33:93.19:0,93,941	0/0:6,0:6:18.04:0,18,184	0/0:21,0:21:57.13:0,57,581	1/1:2,21:23:60.09:754,60,0	1/1:1,5:6:15.05:189,15,0	0/0:18,0:18:54.10:0,54,543	0/0:18,0:18:51.11:0,51,515	0/0:24,0:24:60.10:0,60,603	0/0:11,0:11:33.07:0,33,336
chr10	33522307	.	C	CA	2486.34	PASS	AB=0.781;AC=31;AF=0.554;AN=56;BaseQRankSum=-5.056;DP=483;FS=1.555;HRun=14;HaplotypeScore=64.7545;InbreedingCoeff=0.3088;MQ=70.59;MQ0=2;MQRankSum=0.453;QD=6.72;ReadPosRankSum=-1.765;VQSLOD=2.1601;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:2,0:16:20.36:0,20,59	0/1:1,7:8:1.15:113,0,1	0/1:40,0:20:16.65:17,0,36	0/1:17,0:7:6.64:12,0,7	0/0:18,0:24:32.25:0,32,247	0/0:15,0:19:7.36:0,7,155	0/0:9,0:9:19.63:0,20,114	0/1:10,11:21:39.34:129,0,39	0/0:17,0:18:21.04:0,21,123	1/1:11,10:21:27.36:222,27,0	1/1:8,12:22:9.16:220,9,0	0/0:3,0:6:4.02:0,4,12	1/1:4,9:13:1.73:136,2,0	1/1:3,11:14:9:79,9,0	1/1:9,8:19:17.40:110,17,0	0/1:3,4:8:4.31:83,0,4	0/1:25,1:26:2.73:3,0,233	1/1:1,3:4:9:79,9,0	1/1:8,16:23:3.26:251,3,0	1/1:10,9:19:17.96:150,18,0	0/1:5,6:11:18.26:88,0,18	1/1:5,6:12:18.24:153,18,0	0/0:13,0:18:31.10:0,31,186	0/1:7,0:9:9.46:9,0,65	0/1:9,17:27:15.97:236,0,16	1/1:16,11:26:11.38:212,11,0	1/1:16,11:26:15.39:367,15,0	0/0:3,0:3:2.95:0,3,19
chr10	33522450	.	CTGTGTGTG	C	1318.86	PASS	AB=0.882;AC=29;AF=0.690;AN=42;BaseQRankSum=3.297;DP=665;FS=1.735;HRun=0;HaplotypeScore=158.8890;InbreedingCoeff=0.3113;MQ=61.90;MQ0=39;MQRankSum=-0.962;QD=4.46;ReadPosRankSum=2.782;VQSLOD=2.5846;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:32,0:33:1.55:4,2,0	./.	./.	./.	./.	1/1:26,0:35:2.74:56,3,0	0/0:22,0:22:3.01:0,3,58	0/0:29,0:29:3.06:0,3,8	1/1:8,0:14:2.99:23,3,0	1/1:18,2:18:1.92:43,2,0	./.	1/1:15,2:17:3.01:73,3,0	1/1:8,2:10:3.01:73,3,0	0/0:12,1:13:3.01:0,3,76	0/0:14,0:14:6.01:0,6,68	1/1:8,1:9:3.01:73,3,0	1/1:20,0:26:2.02:54,2,0	0/1:13,2:13:66.57:67,0,76	1/1:13,3:14:6.02:147,6,0	1/1:14,5:20:6.02:144,6,0	./.	1/1:12,2:16:9.50:185,10,0	./.	0/0:19,0:18:2.99:0,3,24	1/1:12,1:15:12.04:188,12,0	1/1:21,6:26:8.70:185,9,0	1/1:17,3:20:5.36:125,5,0	0/0:4,0:5:0.47:0,0,1
chr10	33524981	.	AAAAGAAAGAAAG	A	754.21	PASS	AB=1.000;AC=6;AF=0.115;AN=52;BaseQRankSum=4.699;DP=560;FS=5.184;HRun=0;HaplotypeScore=251.4877;InbreedingCoeff=0.5396;MQ=66.21;MQ0=6;MQRankSum=-4.628;QD=11.26;ReadPosRankSum=0.960;VQSLOD=2.2556;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:5,15:20:5.99:123,6,0	0/0:16,0:16:33.10:0,33,1008	./.	./.	0/0:14,0:14:11.73:0,12,288	0/0:25,0:25:25.83:0,26,598	0/0:12,0:12:11.99:0,12,116	0/0:47,0:44:44.48:0,44,290	0/0:17,0:17:6.62:0,7,107	0/0:28,0:27:48.36:0,48,1290	0/0:25,0:25:39.16:0,39,1207	1/1:12,0:12:6.91:131,7,0	0/0:14,0:14:18.52:0,19,492	0/0:12,0:12:21.07:0,21,656	0/0:29,0:28:33.11:0,33,1483	0/0:17,0:17:24.05:0,24,807	0/0:14,0:14:9.39:0,9,204	0/0:16,0:16:23:0,23,452	0/0:28,0:26:21.21:0,21,808	0/0:29,0:29:44.11:0,44,1406	0/0:13,0:13:15.01:0,15,382	0/0:11,0:11:24.04:0,24,602	0/1:21,0:21:6.03:518,0,6	0/1:14,0:14:10.46:101,0,10	0/0:30,0:30:60.09:0,60,2118	0/0:14,0:14:27.09:0,27,1156	0/0:25,0:25:53.32:0,53,1698	0/0:23,0:23:17.96:0,18,609
chr10	33525008	.	A	AG	589.77	PASS	AB=0.787;AC=5;AF=0.096;AN=52;BaseQRankSum=6.526;DP=536;FS=1.268;HRun=1;HaplotypeScore=162.8319;InbreedingCoeff=-0.1065;MQ=49.84;MQ0=9;MQRankSum=-6.022;QD=5.84;ReadPosRankSum=1.324;VQSLOD=0.6040;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:25:31.37:0,31,395	0/0:20,0:20:56.95:0,57,696	./.	./.	0/1:14,7:21:99:152,0,241	0/1:20,12:32:99:310,0,435	0/1:16,1:16:62.44:62,0,192	0/0:32,0:31:88.28:0,88,975	0/1:12,4:16:99:121,0,170	0/0:29,0:28:81.26:0,81,1041	0/0:24,0:23:66.20:0,66,842	0/0:9,0:9:27.05:0,27,315	0/0:13,0:13:36.12:0,36,466	0/0:13,0:13:39.05:0,39,455	0/0:26,0:25:63.18:0,63,776	0/0:15,0:15:45.14:0,45,572	0/1:9,6:15:60.66:61,0,179	0/0:18,0:18:44.82:0,45,518	0/0:22,0:18:51.93:0,52,608	0/0:28,0:28:84.25:0,84,1064	0/0:11,0:11:30.06:0,30,346	0/0:13,0:13:39.10:0,39,477	0/0:26,0:26:78.08:0,78,883	0/0:14,0:14:29.61:0,30,275	0/0:27,0:27:75.24:0,75,962	0/0:20,0:20:57.18:0,57,723	0/0:24,0:24:72.21:0,72,897	0/0:22,0:22:51.16:0,51,653
chr10	33525017	.	GAAA	G	441.45	PASS	AB=0.938;AC=8;AF=0.148;AN=54;BaseQRankSum=8.439;DP=511;FS=0.608;HRun=3;HaplotypeScore=170.3026;InbreedingCoeff=-0.1804;MQ=49.94;MQ0=7;MQRankSum=-7.856;QD=3.13;ReadPosRankSum=-0.668;VQSLOD=-0.6532;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:25:37.78:0,38,392	0/0:18,0:18:54.18:0,54,913	./.	0/0:4,0:1:3.01:0,3,39	0/1:19,0:19:57.88:58,0,402	0/1:33,0:33:99:257,0,657	0/1:15,0:14:60.35:60,0,226	0/0:29,0:29:85.07:0,85,1124	0/1:15,0:15:97.93:98,0,236	0/0:29,0:28:81.05:0,81,1382	0/0:22,0:21:60.19:0,60,1022	0/1:7,2:9:19.22:19,0,187	0/0:13,0:13:36.12:0,36,537	0/0:13,0:13:39.13:0,39,605	0/0:24,0:23:60.20:0,60,1120	0/0:13,0:13:39.13:0,39,678	0/1:12,0:12:11.23:11,0,321	0/0:15,0:15:42.14:0,42,686	0/0:17,0:14:40.38:0,40,719	0/0:32,0:32:96.32:0,96,1539	0/0:10,0:10:30.08:0,30,462	0/0:12,0:12:36.12:0,36,561	0/1:17,8:25:38.94:39,0,532	0/1:12,1:13:31.90:32,0,140	0/0:26,0:26:78.26:0,78,1541	0/0:21,0:21:63.04:0,63,1087	0/0:28,0:28:84.28:0,84,1533	0/0:16,0:16:32.47:0,32,517
chr10	33525032	.	G	GGAA	3189.58	PASS	AB=1.000;AC=35;AF=0.625;AN=56;BaseQRankSum=-2.296;DP=537;FS=16.662;HRun=0;HaplotypeScore=163.5285;InbreedingCoeff=0.2818;MQ=56.14;MQ0=4;MQRankSum=7.742;QD=7.22;ReadPosRankSum=-2.253;VQSLOD=1.8142;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:47.50:0,47,670	1/1:18,2:20:20.90:324,21,0	0/0:8,0:4:12.01:0,12,147	0/0:13,0:7:10.62:0,11,129	0/1:19,0:19:72.27:72,0,254	0/1:34,0:34:99:227,0,415	0/1:16,0:15:1.26:1,0,280	1/1:13,0:12:17.21:245,17,0	0/1:16,0:16:52.43:52,0,174	1/1:30,0:29:43.07:301,43,0	1/1:25,0:25:29.35:178,29,0	0/0:8,0:8:7.33:0,7,56	1/1:12,0:12:3.92:47,4,0	1/1:16,2:18:30.61:301,31,0	0/0:26,0:25:43.82:0,44,272	1/1:14,0:14:4.32:82,4,0	0/0:10,0:10:4.95:0,5,168	0/1:15,0:15:14.43:14,0,29	1/1:14,0:14:27.43:104,27,0	1/1:34,0:34:48.53:263,49,0	1/1:11,0:11:22.70:114,23,0	1/1:15,0:15:28.47:123,28,0	0/1:27,0:27:36.57:37,0,217	0/1:11,0:11:69.19:69,0,79	1/1:29,0:29:38.89:293,39,0	1/1:22,0:22:46.29:254,46,0	0/1:27,0:27:6.68:98,0,7	0/1:20,0:20:21.53:176,0,22
chr10	33526646	.	A	AC	16010.64	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=3.801;DP=518;FS=20.234;HRun=0;HaplotypeScore=112.7244;InbreedingCoeff=0.9060;MQ=78.41;MQ0=0;MQRankSum=-3.898;QD=34.28;ReadPosRankSum=4.594;VQSLOD=3.2800;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:60.20:0,60,838	1/1:1,10:11:26.66:354,27,0	0/0:15,0:15:37.68:0,38,507	0/0:15,0:15:38.88:0,39,467	1/1:2,24:26:70.45:930,70,0	1/1:1,25:26:69.17:916,69,0	1/1:0,13:13:33.11:438,33,0	1/1:3,33:35:96.08:1220,96,0	1/1:1,10:11:26.13:360,26,0	1/1:3,19:22:56.19:756,56,0	1/1:3,24:27:77.77:983,78,0	1/1:0,12:12:27.06:353,27,0	1/1:4,17:21:37.08:541,37,0	1/1:1,12:13:35.69:469,36,0	1/1:3,16:19:46.68:622,47,0	1/1:1,23:24:59.75:792,60,0	1/1:1,10:11:30.10:395,30,0	1/1:0,2:2:6.02:79,6,0	1/1:4,13:17:44.73:556,45,0	1/1:0,36:36:99:1375,105,0	1/1:0,14:14:36.12:477,36,0	1/1:0,11:11:30.10:395,30,0	1/1:2,19:21:39.87:563,40,0	1/1:1,10:11:33.06:416,33,0	1/1:1,32:33:93.19:1229,93,0	1/1:1,23:24:68.29:914,68,0	1/1:2,22:25:65.78:856,66,0	1/1:1,0:1:2.98:22,3,0
chr10	33526718	.	AT	A	1381.60	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=4.613;DP=479;FS=2.885;HRun=3;HaplotypeScore=64.8738;InbreedingCoeff=0.9852;MQ=80.47;MQ0=0;MQRankSum=-4.659;QD=32.13;ReadPosRankSum=2.022;VQSLOD=4.0209;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:48.16:0,48,691	0/0:11,0:11:33.07:0,33,452	0/0:18,0:18:51.16:0,51,680	0/0:8,0:8:21:0,21,249	0/0:23,0:23:69.23:0,69,994	0/0:19,0:19:57.18:0,57,805	0/0:10,0:10:30.10:0,30,432	0/0:30,0:30:87.27:0,87,1237	0/0:14,0:14:42.12:0,42,570	0/0:28,0:28:81.19:0,81,1140	0/0:21,0:21:63.21:0,63,907	1/1:0,15:15:42.13:521,42,0	0/0:17,0:17:48.16:0,48,691	0/0:8,0:8:24.07:0,24,328	0/0:18,0:18:54.18:0,54,778	0/0:17,0:17:45.15:0,45,648	0/0:8,0:8:24.05:0,24,319	0/0:5,0:5:15.05:0,15,216	0/0:18,0:18:54.15:0,54,740	0/0:23,0:23:69.22:0,69,976	0/0:9,0:9:27.09:0,27,389	0/0:22,0:22:66.22:0,66,950	1/1:1,16:17:48.15:595,48,0	1/1:0,11:11:33.10:409,33,0	0/0:37,0:37:99:0,105,1512	0/0:26,0:26:78.26:0,78,1123	0/0:25,0:24:72.18:0,72,993	0/0:5,0:5:15.05:0,15,216
chr10	33531356	.	T	TAGTGTGGTGTCCA	75177	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-6.476;DP=637;FS=6.554;HRun=0;HaplotypeScore=199.9035;InbreedingCoeff=0.9102;MQ=84.11;MQ0=0;MQRankSum=-13.718;QD=138.45;ReadPosRankSum=3.861;VQSLOD=4.8296;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,99,3644	1/1:4,5:10:27.09:1591,27,0	0/0:26,0:26:57.14:0,57,1951	0/0:33,0:33:78.24:0,78,2282	1/1:8,6:15:21.03:1206,21,0	1/1:13,7:22:45.14:2468,45,0	1/1:6,3:13:27.09:1229,27,0	1/1:25,7:39:99:5490,114,0	1/1:12,14:28:72.25:4267,72,0	1/1:10,14:25:60.21:3590,60,0	1/1:7,12:19:45.11:2595,45,0	1/1:13,16:31:81.23:4587,81,0	1/1:9,12:26:66.23:3936,66,0	1/1:10,18:32:78.27:4750,78,0	1/1:15,8:24:60.08:3270,60,0	1/1:9,17:29:75.26:4523,75,0	1/1:7,10:19:36.12:2380,36,0	1/1:6,4:12:21.07:1338,21,0	1/1:8,3:13:39.11:1764,39,0	1/1:13,15:30:75.17:4148,75,0	1/1:8,8:17:45.15:2488,45,0	1/1:12,7:21:39.09:2075,39,0	1/1:7,8:19:48.16:2792,48,0	1/1:2,8:13:21.07:1383,21,0	1/1:10,16:27:72.21:4066,72,0	1/1:13,13:29:78.27:4392,78,0	1/1:6,19:28:72.25:4653,72,0	1/1:1,1:2:0.19:194,0,0
chr10	33532248	.	GA	G	4979.63	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=7.407;DP=622;FS=1.157;HRun=2;HaplotypeScore=68.3502;InbreedingCoeff=0.9788;MQ=78.54;MQ0=0;MQRankSum=-1.826;QD=35.32;ReadPosRankSum=1.233;VQSLOD=5.2620;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,23:23:60.20:779,60,0	0/0:19,0:19:57.17:0,57,815	0/0:14,0:14:36.06:0,36,465	0/0:14,0:14:41.35:0,41,572	1/1:0,28:28:81.26:1051,81,0	1/1:0,29:29:81.26:1052,81,0	1/1:0,23:23:66.21:857,66,0	0/0:36,0:36:99:0,108,1544	1/1:2,19:21:51.17:662,51,0	0/0:25,0:25:69.22:0,69,1013	0/0:34,0:34:99:0,99,1441	0/0:17,0:17:51.17:0,51,765	0/0:18,0:18:51.16:0,51,744	0/0:20,0:20:60.18:0,60,876	0/0:20,0:20:60.20:0,60,897	0/0:19,0:19:57.19:0,57,855	1/1:1,16:17:6.20:578,6,0	0/0:8,0:8:24.07:0,24,341	0/0:23,0:23:69.23:0,69,1034	0/0:30,0:30:87.29:0,87,1303	0/0:14,0:14:42.14:0,42,628	0/0:24,0:24:72.24:0,72,1079	0/0:32,0:32:92.97:0,93,1340	0/0:14,0:14:42.13:0,42,610	0/0:32,0:32:96.33:0,96,1439	0/0:24,0:24:72.24:0,72,1079	0/0:31,0:31:93.30:0,93,1372	0/0:13,0:13:39.13:0,39,584
chr10	33532927	.	A	AATAG	5828.90	PASS	AB=0.784;AC=31;AF=0.620;AN=50;BaseQRankSum=-0.406;DP=684;FS=4.902;HRun=0;HaplotypeScore=132.1434;InbreedingCoeff=0.8618;MQ=60.11;MQ0=4;MQRankSum=-2.823;QD=14.22;ReadPosRankSum=-2.692;VQSLOD=4.0890;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:17.01:0,17,453	0/0:6,0:6:12.01:0,12,157	./.	./.	0/1:29,10:39:99:535,0,378	1/1:13,1:23:12.04:194,12,0	0/0:24,0:24:15.05:0,15,219	./.	1/1:12,8:20:15.05:347,15,0	0/0:27,0:27:48.15:0,48,702	0/0:23,0:23:24.07:0,24,344	1/1:10,1:22:17.09:229,17,0	0/0:13,0:13:30.10:0,30,448	1/1:14,12:26:15.05:347,15,0	0/0:18,0:29:27.50:0,28,253	0/0:25,0:25:30.10:0,30,454	0/0:14,0:25:23.97:0,24,218	1/1:15,1:16:15.05:245,15,0	1/1:20,0:19:21.06:305,21,0	1/1:36,0:35:20.79:281,21,0	1/1:13,0:13:6.01:72,6,0	1/1:8,8:16:24.08:516,24,0	1/1:18,1:30:27.09:415,27,0	1/1:22,0:21:11.97:95,12,0	1/1:17,0:34:21.07:314,21,0	1/1:19,16:35:54.19:1224,54,0	1/1:22,0:38:27.09:433,27,0	1/1:15,4:19:12.04:277,12,0
chr10	33535212	.	G	GGTGT	2960.81	PASS	AB=0.800;AC=49;AF=0.980;AN=50;DP=621;FS=0.000;HRun=0;HaplotypeScore=143.1828;InbreedingCoeff=0.1488;MQ=60.69;MQ0=26;QD=5.53;VQSLOD=2.4860;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:35,0:43:14.95:169,15,0	1/1:6,0:8:6.02:100,6,0	./.	./.	1/1:13,6:19:9.03:211,9,0	1/1:23,0:22:24.86:283,25,0	1/1:15,1:18:8.82:118,9,0	1/1:29,0:27:14.84:124,15,0	1/1:13,7:26:6.02:141,6,0	1/1:15,0:14:7.37:83,7,0	./.	1/1:20,2:27:21.26:337,21,0	1/1:12,0:17:9.01:103,9,0	1/1:11,0:15:7.92:66,8,0	1/1:21,0:27:5.85:57,6,0	1/1:9,1:16:12.04:219,12,0	1/1:9,6:18:5.75:82,6,0	1/1:9,0:10:7.54:80,8,0	1/1:26,0:22:6.02:82,6,0	0/1:12,0:15:0:1,0,0	1/1:38,0:44:2.98:28,3,0	1/1:16,0:19:3.01:34,3,0	1/1:9,0:8:6.02:109,6,0	1/1:33,0:33:17.47:145,17,0	1/1:7,0:8:3.01:42,3,0	1/1:27,0:32:22.61:285,23,0	1/1:13,0:16:10.28:136,10,0	1/1:3,0:3:0.47:1,0,0
chr10	33535604	.	A	ATC	1662.11	PASS	AB=0.750;AC=43;AF=0.977;AN=44;BaseQRankSum=-0.338;DP=475;FS=2.113;HRun=0;HaplotypeScore=88.1156;InbreedingCoeff=-0.1133;MQ=65.86;MQ0=6;MQRankSum=-0.825;QD=4.42;ReadPosRankSum=0.825;VQSLOD=2.5509;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	1/1:6,0:6:15.31:104,15,0	./.	./.	1/1:18,0:16:2.99:25,3,0	1/1:13,0:13:2.99:24,3,0	./.	1/1:33,0:33:26.83:201,27,0	1/1:15,0:12:3:25,3,0	1/1:21,0:19:20.89:166,21,0	./.	1/1:14,0:13:2.99:24,3,0	1/1:12,10:22:6.15:60,6,0	1/1:20,0:19:5.88:36,6,0	./.	1/1:11,9:20:3.01:45,3,0	1/1:12,0:10:2.94:18,3,0	1/1:9,0:9:20.86:168,21,0	1/1:18,0:18:17.93:162,18,0	1/1:13,0:13:14.82:99,15,0	0/1:8,4:12:18.39:37,0,18	1/1:11,8:19:2.94:18,3,0	1/1:14,0:13:3:25,3,0	1/1:17,0:17:2.96:19,3,0	1/1:11,9:20:6.02:87,6,0	1/1:18,6:23:19.60:231,20,0	1/1:25,0:25:19.17:131,19,0	1/1:8,3:11:3.01:45,3,0
chr10	33537877	.	AGG	A	8106.69	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=3.787;DP=573;FS=5.063;HRun=10;HaplotypeScore=80.5853;InbreedingCoeff=0.9775;MQ=74.47;MQ0=2;MQRankSum=-1.681;QD=26.41;ReadPosRankSum=7.670;VQSLOD=4.5636;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:25:27.05:0,27,273	1/1:4,5:9:18.04:194,18,0	0/0:30,0:24:7.92:0,8,343	0/0:32,0:23:8.76:0,9,343	0/0:19,0:20:41.99:0,42,629	0/0:15,0:17:36.09:0,36,488	0/0:23,0:23:46.04:0,46,713	1/1:5,14:21:36.07:400,36,0	0/0:29,0:29:57.13:0,57,801	1/1:3,16:20:36.01:458,36,0	1/1:2,16:18:48.13:534,48,0	0/0:20,0:20:45.15:0,45,708	1/1:3,14:17:45.11:501,45,0	1/1:2,11:13:39.07:419,39,0	1/1:5,17:21:48.07:507,48,0	1/1:5,17:22:57.14:630,57,0	0/0:31,0:31:78.22:0,78,1160	1/1:0,6:6:18.05:201,18,0	1/1:2,16:18:48.09:510,48,0	1/1:3,13:16:33.04:355,33,0	1/1:4,17:21:42.10:468,42,0	1/1:3,18:21:57.15:635,57,0	0/0:18,0:18:39.13:0,39,614	0/0:19,0:19:42.13:0,42,636	1/1:4,16:20:48.05:531,48,0	1/1:4,25:29:69.17:769,69,0	1/1:6,20:26:69.18:762,69,0	1/1:1,7:8:21.06:233,21,0
chr10	33537886	.	GGT	G	2216.39	PASS	AB=0.978;AC=24;AF=0.429;AN=56;BaseQRankSum=13.944;DP=565;FS=15.325;HRun=0;HaplotypeScore=98.0228;InbreedingCoeff=0.1962;MQ=79.26;MQ0=2;MQRankSum=-1.007;QD=6.84;ReadPosRankSum=11.342;VQSLOD=0.2704;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:44.40:0,44,367	1/1:5,1:6:15.95:111,16,0	0/0:34,0:27:11.93:0,12,471	0/0:25,0:19:18.89:0,19,419	0/0:24,0:24:62.74:0,63,786	0/0:14,0:14:38.78:0,39,500	0/0:17,0:17:47.79:0,48,746	0/1:31,0:31:27.08:27,0,298	0/0:21,0:21:57.17:0,57,889	0/1:21,0:21:76.17:76,0,96	0/1:21,1:22:52.62:147,0,53	0/0:21,0:21:63.12:0,63,836	1/1:15,2:17:18.53:180,19,0	0/1:14,1:15:7.81:196,0,8	0/1:21,3:23:42.36:209,0,42	1/1:17,2:19:49.49:248,49,0	0/0:27,0:27:77.41:0,77,1175	0/1:8,0:8:20.36:62,0,20	0/1:19,0:19:44.59:64,0,45	0/1:17,0:17:90.76:98,0,91	0/1:21,0:21:46.17:75,0,46	1/1:21,0:21:6.66:147,7,0	0/0:19,0:19:48.11:0,48,704	0/0:15,0:15:45.10:0,45,625	1/1:19,2:21:1.79:221,2,0	0/1:27,0:27:35.60:132,0,36	1/1:22,4:26:19:322,19,0	1/1:8,1:9:2.17:90,2,0
chr10	33538750	.	G	GT	10254.47	PASS	AB=0.962;AC=42;AF=0.750;AN=56;BaseQRankSum=-7.901;DP=599;FS=0.775;HRun=9;HaplotypeScore=66.6547;InbreedingCoeff=0.7961;MQ=75.86;MQ0=2;MQRankSum=0.888;QD=21.82;ReadPosRankSum=1.198;VQSLOD=5.6175;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:62.98:0,63,547	1/1:3,12:15:9.94:321,10,0	0/1:23,0:20:24.72:25,0,87	0/1:10,0:10:20.55:49,0,21	0/0:23,1:24:32.83:0,33,513	0/0:25,0:25:65.98:0,66,573	0/0:19,0:19:50.98:0,51,443	1/1:7,20:26:57.10:607,57,0	0/0:16,0:16:41.99:0,42,365	1/1:6,19:25:37.06:615,37,0	1/1:2,18:21:60.12:643,60,0	1/1:3,2:22:48.46:261,48,0	1/1:2,13:15:36.10:398,36,0	1/1:3,16:19:47.96:512,48,0	1/1:3,20:24:50.97:545,51,0	1/1:3,19:22:31.10:571,31,0	0/0:22,0:22:59.94:0,60,512	1/1:2,7:10:17.88:180,18,0	1/1:2,22:25:69:734,69,0	1/1:5,30:36:92.97:966,93,0	1/1:0,16:16:45.12:498,45,0	1/1:4,18:23:45.08:484,45,0	1/1:7,2:26:48.43:260,48,0	1/1:1,0:17:42.65:213,43,0	1/1:2,20:22:51.14:564,51,0	1/1:4,29:34:90.04:957,90,0	1/1:3,24:26:66.18:730,66,0	1/1:3,3:7:11.99:120,12,0
chr10	33538982	.	GAGAGACAGAGAGAC	G	1200.77	PASS	AB=0.679;AC=13;AF=0.232;AN=56;BaseQRankSum=3.246;DP=711;FS=7.613;HRun=0;HaplotypeScore=257.0842;InbreedingCoeff=0.7232;MQ=68.13;MQ0=4;MQRankSum=-3.432;QD=6.16;ReadPosRankSum=0.669;VQSLOD=1.2944;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:33.11:0,33,1853	0/0:11,0:11:24.08:0,24,1197	0/0:35,0:25:5.95:0,6,54	0/0:33,0:27:11.96:0,12,148	0/1:13,15:27:0:0,0,0	1/1:9,16:25:15.05:568,15,0	1/1:13,9:21:3.01:114,3,0	0/0:34,0:31:27.07:0,27,696	1/1:12,11:23:3.01:117,3,0	0/0:31,0:31:57.18:0,57,2324	0/0:36,0:36:42.13:0,42,2170	1/1:9,13:22:3.01:117,3,0	0/0:27,0:27:60.19:0,60,2926	0/0:24,0:24:42.14:0,42,2185	0/0:32,0:32:48.16:0,48,2802	0/0:24,0:24:54.17:0,54,2573	0/1:13,12:25:1.05:142,0,1	0/0:6,0:6:8.93:0,9,84	0/0:20,0:19:27.06:0,27,1335	0/0:33,0:33:48.16:0,48,2386	0/0:23,0:23:30.10:0,30,1724	0/0:25,0:25:48.16:0,48,2470	1/1:20,3:23:12.04:289,12,0	0/1:16,11:27:0:0,0,0	0/0:20,0:20:45.14:0,45,1790	0/0:37,0:37:78.27:0,78,3941	0/0:25,0:25:42.08:0,42,2133	0/0:9,0:9:21.07:0,21,1254
chr10	33539109	.	CACACAGAGAGAG	C	7638.07	PASS	AB=1.000;AC=40;AF=0.769;AN=52;BaseQRankSum=-6.947;DP=526;FS=18.206;HRun=0;HaplotypeScore=157.5296;InbreedingCoeff=0.2050;MQ=46.11;MQ0=17;MQRankSum=1.794;QD=17.13;ReadPosRankSum=1.553;VQSLOD=2.9797;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:13:0.73:1,1,0	1/1:2,6:8:6.02:161,6,0	0/0:12,0:1:3.01:0,3,32	./.	1/1:13,0:13:15.04:176,15,0	0/1:18,0:18:99:226,0,127	0/1:17,0:15:98.87:99,0,205	1/1:27,0:26:7.96:475,8,0	0/0:17,0:15:17.73:0,18,381	1/1:25,0:23:51.52:1013,52,0	./.	0/1:10,0:9:72.88:73,0,175	1/1:6,18:25:4.72:165,5,0	1/1:15,0:14:23.55:409,24,0	0/1:21,0:20:7.41:7,0,484	1/1:27,0:27:50.76:819,51,0	0/1:9,0:9:99:109,0,309	1/1:6,0:6:2.84:43,3,0	1/1:16,0:16:26.87:418,27,0	1/1:26,0:27:34.58:525,35,0	1/1:49,0:47:43.69:659,44,0	1/1:18,0:18:11.71:162,12,0	0/0:12,0:11:3.01:0,3,113	0/1:22,0:20:36.87:37,0,515	1/1:16,0:16:21.07:307,21,0	1/1:28,0:26:48.31:938,48,0	1/1:5,16:21:11.66:417,12,0	1/1:11,0:10:27.09:400,27,0
chr10	33539113	.	CAGAGAGAG	C	2453.77	PASS	AB=0.806;AC=25;AF=0.521;AN=48;BaseQRankSum=-2.557;DP=515;FS=16.729;HRun=0;HaplotypeScore=158.1257;InbreedingCoeff=0.5976;MQ=46.35;MQ0=13;MQRankSum=-1.196;QD=8.55;ReadPosRankSum=1.993;VQSLOD=1.7973;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:14:0.94:2,1,0	1/1:8,0:8:6:77,6,0	./.	./.	0/0:15,0:14:0:0,0,0	0/0:19,0:19:11.27:0,11,201	0/0:19,0:17:9.03:0,9,300	0/1:26,1:26:10.02:94,0,10	0/0:16,0:14:18.06:0,18,426	1/1:13,2:21:30.08:707,30,0	./.	0/0:11,0:10:9.01:0,9,196	1/1:25,0:25:5.32:80,5,0	1/1:11,0:11:8.71:225,9,0	0/0:25,0:24:26.67:0,27,801	1/1:17,9:27:12:221,12,0	0/0:11,0:11:12.93:0,13,338	1/1:2,4:6:2.84:72,3,0	1/1:17,0:17:7.16:223,7,0	0/0:20,7:27:1.36:0,1,3	0/1:31,16:45:0:0,0,1	0/1:10,7:17:0:0,0,0	0/0:14,0:13:3.01:0,3,100	0/0:21,0:19:18.06:0,18,510	./.	1/1:19,1:26:19.30:577,19,0	1/1:21,1:21:11.49:259,11,0	1/1:9,2:10:3:74,3,0
chr10	33541631	.	AC	A	987.18	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.380;DP=385;FS=0.000;HRun=2;HaplotypeScore=37.8881;InbreedingCoeff=0.9763;MQ=66.59;MQ0=1;MQRankSum=-0.361;QD=29.91;ReadPosRankSum=-0.468;VQSLOD=2.7901;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:30.10:0,30,450	0/0:7,0:7:21.05:0,21,292	0/0:8,0:7:21.07:0,21,294	0/0:8,0:8:21.54:0,22,312	0/0:24,0:24:72.22:0,72,1038	0/0:15,0:15:45.15:0,45,674	0/0:5,0:5:15.04:0,15,207	0/0:38,0:38:99:0,114,1671	0/0:17,0:17:48.16:0,48,719	0/0:14,0:14:42.12:0,42,592	0/0:24,0:24:72.23:0,72,1056	1/1:0,13:13:36.12:467,36,0	0/0:20,0:20:60.20:0,60,899	0/0:4,0:4:12.04:0,12,180	0/0:16,0:16:48.15:0,48,701	0/0:19,0:19:57.11:0,57,806	0/0:8,0:8:24.08:0,24,359	0/0:11,0:10:27.09:0,27,404	0/0:14,0:14:42.14:0,42,628	0/0:19,0:19:57.19:0,57,853	0/0:10,0:10:30.10:0,30,449	0/0:9,0:9:27.09:0,27,404	1/1:1,10:10:24.08:312,24,0	1/1:0,9:9:27.09:350,27,0	0/0:11,0:11:30.10:0,30,450	0/0:14,0:14:42.14:0,42,630	0/0:14,0:14:42.14:0,42,629	0/0:13,0:13:39.13:0,39,584
chr10	33548364	.	T	TA	904.68	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=-6.913;DP=597;FS=2.064;HRun=10;HaplotypeScore=61.2665;InbreedingCoeff=0.8037;MQ=75.02;MQ0=0;MQRankSum=0.409;QD=12.56;ReadPosRankSum=1.259;VQSLOD=3.4266;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:65.89:0,66,536	0/0:5,0:5:14.98:0,15,123	0/1:19,0:18:9.44:9,0,109	0/0:20,0:17:32.15:0,32,252	0/0:35,0:35:86.86:0,87,714	0/0:19,1:20:23.93:0,24,389	0/0:20,0:20:39.28:0,39,379	0/0:30,0:31:73.90:0,74,589	0/0:21,0:21:35.72:0,36,444	0/0:34,0:34:87.29:0,87,709	0/0:29,0:29:74.74:0,75,614	1/1:4,13:17:14.85:360,15,0	0/0:26,0:26:65.91:0,66,541	0/0:11,0:11:32.95:0,33,269	0/0:19,0:19:44.92:0,45,369	0/0:14,1:16:6:0,6,244	0/0:14,0:14:31.17:0,31,245	0/0:12,0:12:26.97:0,27,222	0/0:21,0:21:44.92:0,45,368	0/0:32,0:32:80.89:0,81,662	0/0:9,0:9:26.93:0,27,215	0/0:24,0:24:65.89:0,66,538	1/1:7,20:27:26.49:487,26,0	1/1:3,6:9:18.05:192,18,0	0/0:25,0:25:56.88:0,57,462	0/0:27,0:27:77.24:0,77,617	0/0:39,0:39:99:0,108,880	0/0:7,0:7:14.97:0,15,123
chr10	33549306	.	C	CT	579.33	PASS	AB=0.645;AC=5;AF=0.089;AN=56;BaseQRankSum=-5.147;DP=526;FS=7.857;HRun=10;HaplotypeScore=56.6366;InbreedingCoeff=0.6693;MQ=74.51;MQ0=0;MQRankSum=-3.617;QD=14.48;ReadPosRankSum=-0.544;VQSLOD=3.1124;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:47.88:0,48,394	0/0:4,0:4:5.98:0,6,49	0/0:12,0:14:27.61:0,28,186	0/0:11,0:11:11.05:0,11,123	0/0:32,0:33:64.85:0,65,517	0/0:20,1:21:21.92:0,22,384	0/0:21,0:21:56.92:0,57,468	0/0:24,0:24:41.90:0,42,345	0/0:22,1:23:27.93:0,28,436	0/0:24,0:25:64.95:0,65,521	0/0:15,0:15:26.94:0,27,222	1/1:1,12:13:30.08:320,30,0	0/0:27,0:27:74.88:0,75,609	0/0:22,0:22:59.92:0,60,492	0/0:14,0:14:11.87:0,12,247	0/0:10,0:11:25.96:0,26,200	0/0:17,1:18:9.93:0,10,288	0/0:6,0:6:15.45:0,15,124	0/0:30,0:30:44.87:0,45,366	0/0:26,0:26:56.85:0,57,468	0/0:17,0:20:39.04:0,39,289	0/0:14,1:16:28.95:0,29,225	0/1:9,11:20:19.20:226,0,19	1/1:2,5:7:15.04:160,15,0	0/0:24,0:25:65.19:0,65,540	0/0:20,2:22:6.88:0,7,259	0/0:30,0:30:83.87:0,84,683	0/0:6,0:6:17.98:0,18,148
chr10	33549925	.	C	CT	3759.86	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=10.478;DP=561;FS=1.639;HRun=8;HaplotypeScore=67.6053;InbreedingCoeff=0.9948;MQ=74.73;MQ0=0;MQRankSum=0.124;QD=22.51;ReadPosRankSum=1.143;VQSLOD=4.1925;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:80.99:0,81,731	0/0:8,0:8:24:0,24,215	0/0:14,0:14:20.99:0,21,191	0/0:7,0:7:15.01:0,15,135	1/1:3,19:22:23.69:527,24,0	1/1:3,26:30:75.06:845,75,0	1/1:2,16:18:45.13:519,45,0	0/0:33,0:33:90:0,90,809	1/1:1,16:17:39.12:450,39,0	0/0:26,0:26:75.04:0,75,685	0/0:22,0:22:66.02:0,66,599	1/1:1,0:28:65.64:353,66,0	0/0:25,0:25:69.02:0,69,627	0/0:15,0:15:45.01:0,45,407	0/0:16,0:16:36.01:0,36,329	0/0:20,0:20:54.03:0,54,494	1/1:1,22:23:57.17:658,57,0	0/0:15,0:15:41.99:0,42,378	0/0:15,0:15:36.01:0,36,327	0/0:25,0:25:63.03:0,63,576	0/0:13,0:13:30.01:0,30,275	0/0:27,0:27:78.02:0,78,704	1/1:0,0:19:51.06:270,51,0	1/1:0,0:10:25.71:138,26,0	0/0:18,0:18:45.02:0,45,412	0/0:27,0:27:72.03:0,72,659	0/0:30,0:30:90.02:0,90,816	0/0:7,0:7:21.01:0,21,192
chr10	33550041	.	CA	C	1307.96	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=8.998;DP=504;FS=12.635;HRun=11;HaplotypeScore=50.6016;InbreedingCoeff=0.8770;MQ=69.61;MQ0=0;MQRankSum=-1.364;QD=16.15;ReadPosRankSum=0.744;VQSLOD=3.3545;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,21:27:32.97:467,33,0	0/0:4,0:5:11.90:0,12,111	0/0:13,0:13:17.80:0,18,146	0/0:2,0:2:2.98:0,3,21	0/0:25,1:26:41.52:0,42,641	0/0:23,0:23:60.14:0,60,626	0/0:15,0:15:39.10:0,39,416	0/0:29,0:29:75.18:0,75,792	0/0:18,0:19:50.96:0,51,526	0/0:20,2:22:32.50:0,32,551	0/0:26,0:26:60.13:0,60,622	1/1:1,17:18:38.96:320,39,0	0/0:18,1:19:23.45:0,23,440	0/0:11,0:11:33.06:0,33,341	0/0:21,1:22:32.50:0,32,551	0/0:22,0:23:50.26:0,50,555	0/0:16,0:16:42.09:0,42,441	0/0:7,0:7:21.05:0,21,224	0/0:16,2:18:4.76:0,5,431	0/0:23,0:24:59.95:0,60,602	0/0:18,0:18:45.09:0,45,465	0/0:20,0:20:51.12:0,51,537	1/1:2,25:27:7.95:478,8,0	1/1:0,9:9:23.97:197,24,0	0/0:18,1:19:11.45:0,11,327	0/0:18,1:20:23.31:0,23,437	0/0:18,0:18:48.12:0,48,512	0/0:8,0:8:21.04:0,21,216
chr10	33550677	.	T	TA	963.83	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-6.731;DP=483;FS=0.000;HRun=9;HaplotypeScore=47.7245;InbreedingCoeff=0.9778;MQ=70.04;MQ0=1;MQRankSum=-3.328;QD=26.05;ReadPosRankSum=0.174;VQSLOD=3.9273;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,34:37:96.26:1059,96,0	0/0:7,0:7:21:0,21,182	0/0:19,0:18:20.82:0,21,162	0/0:16,0:16:26.96:0,27,230	0/0:16,0:16:47.98:0,48,414	0/0:22,0:23:67.97:0,68,567	0/0:12,0:12:35.96:0,36,304	0/0:14,0:14:29.98:0,30,260	0/0:16,0:16:44.99:0,45,390	0/0:18,0:18:50.97:0,51,440	0/0:12,0:12:35.98:0,36,309	0/0:17,0:17:41.96:0,42,360	0/0:15,0:15:38.12:0,38,336	0/0:12,0:12:29.96:0,30,257	0/0:18,0:18:50.96:0,51,435	0/0:11,0:11:23.96:0,24,205	0/0:26,0:26:65.95:0,66,568	0/0:13,0:13:26.96:0,27,234	0/0:18,0:18:47.98:0,48,413	0/0:18,0:18:44.98:0,45,391	0/0:18,0:18:41.98:0,42,364	0/0:12,0:12:29.99:0,30,260	0/0:20,0:20:50.99:0,51,442	0/0:24,0:24:49.16:0,49,553	0/0:18,0:18:50.98:0,51,441	0/0:24,0:24:68.99:0,69,599	0/0:23,0:23:65.95:0,66,565	0/0:6,0:6:18:0,18,156
chr10	33551402	.	TG	T	5185.69	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=12.370;DP=737;FS=1.589;HRun=2;HaplotypeScore=72.7205;InbreedingCoeff=0.9998;MQ=74.06;MQ0=0;MQRankSum=-2.114;QD=38.99;ReadPosRankSum=1.211;VQSLOD=5.3800;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,157,2479	0/0:12,0:12:36.12:0,36,569	0/0:32,0:31:83.46:0,83,1344	0/0:23,0:22:66.18:0,66,1002	1/1:0,26:26:72.24:993,72,0	1/1:0,28:28:75.25:1048,75,0	1/1:0,15:15:45.15:629,45,0	0/0:29,0:29:87.29:0,87,1365	1/1:0,31:31:90.30:1258,90,0	0/0:30,0:30:90.31:0,90,1436	0/0:29,0:29:84.29:0,84,1326	0/0:18,0:18:54.18:0,54,863	0/0:29,0:29:87.26:0,87,1341	0/0:33,0:33:99:0,99,1556	0/0:32,0:32:96.33:0,96,1526	0/0:23,0:23:69.24:0,69,1099	1/1:0,33:33:90.30:1257,90,0	0/0:20,0:20:60.20:0,60,958	0/0:20,0:20:60.18:0,60,929	0/0:21,0:21:60.19:0,60,937	0/0:43,0:42:99:0,129,2060	0/0:19,0:19:57.19:0,57,911	0/0:29,0:29:87.30:0,87,1378	0/0:30,0:30:90.29:0,90,1408	0/0:15,0:15:45.15:0,45,719	0/0:26,0:26:72.25:0,72,1150	0/0:28,0:27:81.24:0,81,1227	0/0:10,0:10:30.09:0,30,456
chr10	33551934	.	C	CAA	22535.92	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=9.147;DP=582;FS=6.984;HRun=0;HaplotypeScore=167.8277;InbreedingCoeff=0.9983;MQ=89.96;MQ0=0;MQRankSum=-11.357;QD=42.68;ReadPosRankSum=7.899;VQSLOD=4.8340;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,23:26:72.24:1111,72,0	1/1:1,10:11:33.11:497,33,0	0/0:22,0:21:63.14:0,63,946	0/0:32,0:32:90.14:0,90,1330	1/1:2,25:27:77.93:1108,78,0	1/1:4,27:31:90.30:1348,90,0	1/1:1,15:16:48.16:675,48,0	1/1:2,17:19:51.16:707,51,0	1/1:2,17:19:54.01:784,54,0	1/1:3,19:22:66.22:1026,66,0	1/1:3,27:30:70.02:1328,70,0	1/1:2,14:16:47.75:699,48,0	1/1:3,17:20:60.18:874,60,0	1/1:1,21:22:63.21:949,63,0	1/1:2,12:14:42.01:617,42,0	1/1:2,24:26:78.27:1234,78,0	1/1:3,16:19:53.92:800,54,0	1/1:0,13:13:39.13:624,39,0	1/1:2,13:14:39.13:578,39,0	1/1:0,19:19:57.19:863,57,0	1/1:3,9:12:26:402,26,0	1/1:4,10:14:26.20:491,26,0	1/1:3,25:28:70.56:1136,71,0	1/1:2,15:17:48.16:727,48,0	1/1:3,19:22:63.19:973,63,0	1/1:3,20:23:58.11:943,58,0	1/1:3,33:36:99:1547,105,0	1/1:0,11:11:33.11:493,33,0
chr10	33551935	.	T	TGG	24107.81	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=9.253;DP=634;FS=1.766;HRun=0;HaplotypeScore=183.1744;InbreedingCoeff=0.9990;MQ=85.44;MQ0=0;MQRankSum=-11.205;QD=41.42;ReadPosRankSum=6.938;VQSLOD=4.9315;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,23:31:80.86:1199,81,0	1/1:3,10:13:39:541,39,0	0/0:21,0:20:60.08:0,60,912	0/0:31,0:31:87.24:0,87,1338	1/1:6,25:31:87.28:1232,87,0	1/1:7,27:34:96.31:1429,96,0	1/1:3,15:18:48.09:643,48,0	1/1:7,17:24:69.23:982,69,0	1/1:2,17:19:54.18:820,54,0	1/1:3,19:22:63.15:903,63,0	1/1:10,27:37:96.33:1478,96,0	1/1:4,14:18:41.25:717,41,0	1/1:4,17:21:53.25:849,53,0	1/1:3,21:24:72.19:1058,72,0	1/1:7,12:19:54.17:774,54,0	1/1:3,24:27:70.59:1215,71,0	1/1:3,16:19:53.97:814,54,0	1/1:0,13:13:39.13:624,39,0	1/1:10,13:22:60.11:826,60,0	1/1:3,19:22:63.21:932,63,0	1/1:4,9:13:26.07:407,26,0	1/1:4,10:14:36.10:525,36,0	1/1:3,25:28:81.27:1213,81,0	1/1:3,15:18:48.16:727,48,0	1/1:2,19:21:63.20:975,63,0	1/1:6,20:26:75.25:1150,75,0	1/1:2,33:35:99:1583,105,0	1/1:1,11:12:33.11:493,33,0
chr10	33552085	.	G	GATACATACATACATAC	7934.87	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=-2.765;DP=647;FS=22.367;HRun=0;HaplotypeScore=272.3549;InbreedingCoeff=0.9064;MQ=60.99;MQ0=0;MQRankSum=-8.277;QD=46.40;ReadPosRankSum=-0.534;VQSLOD=2.8597;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:69.68:0,70,2645	0/0:10,0:10:24.08:0,24,968	0/0:13,0:13:23.23:0,23,750	0/0:13,0:13:24.08:0,24,704	1/1:10,16:32:23.83:1832,24,0	1/1:10,12:31:36.12:2657,36,0	1/1:12,2:19:3.01:229,3,0	0/0:47,0:47:99:0,99,3296	1/1:7,4:18:12.04:744,12,0	0/0:30,0:30:66.19:0,66,2432	0/0:28,0:28:63.20:0,63,2478	1/1:21,0:21:18.04:845,18,0	0/0:24,0:24:54.19:0,54,2096	0/0:22,0:22:54.17:0,54,1968	0/0:18,0:18:45.14:0,45,1713	0/0:32,0:32:72.22:0,72,2729	1/1:15,0:14:27.09:1347,27,0	0/0:16,0:16:35.15:0,35,1249	0/0:24,0:23:54.18:0,54,2051	0/0:28,0:28:81.25:0,81,3226	0/0:18,0:18:42.14:0,42,1558	0/0:19,0:19:51.16:0,51,2100	1/1:8,0:21:5.61:280,6,0	0/1:14,0:14:0.14:0,0,1	0/0:23,0:23:57.18:0,57,2248	0/0:30,0:30:81.26:0,81,3053	0/0:37,0:37:93.32:0,93,3670	0/0:12,0:12:26.92:0,27,947
chr10	33552273	.	GTA	G	4862.71	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=13.266;DP=588;FS=9.948;HRun=0;HaplotypeScore=76.1017;InbreedingCoeff=0.9825;MQ=62.28;MQ0=5;MQRankSum=-1.148;QD=27.79;ReadPosRankSum=3.404;VQSLOD=5.6122;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:57.19:0,57,972	0/0:7,0:7:21.07:0,21,359	0/0:4,0:4:12:0,12,161	0/0:9,0:6:12.04:0,12,181	1/1:1,35:35:72.23:953,72,0	1/1:1,24:23:54.18:715,54,0	1/1:1,9:10:24.08:320,24,0	0/0:48,0:48:99:0,132,2276	1/1:1,28:28:57.19:759,57,0	0/0:26,0:26:72.23:0,72,1193	0/0:39,0:39:93.32:0,93,1606	1/1:0,14:14:36.12:479,36,0	0/0:21,0:21:51.16:0,51,851	0/0:14,0:14:39.12:0,39,648	0/0:20,0:20:57.20:0,57,973	0/0:17,0:17:48.15:0,48,778	1/1:1,16:17:33.11:439,33,0	0/0:12,0:12:28.34:0,28,470	0/0:11,0:11:30.10:0,30,518	0/0:36,0:36:99:0,99,1593	0/0:10,0:10:30.10:0,30,519	0/0:21,0:21:60.19:0,60,1002	1/1:5,28:33:69.23:918,69,0	1/1:0,11:11:21.07:280,21,0	0/0:30,0:30:84.27:0,84,1399	0/0:28,0:28:72.24:0,72,1215	0/0:30,0:30:81.28:0,81,1388	0/0:11,0:11:12.01:0,12,177
chr10	33552543	.	T	TG	9428.69	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=5.775;DP=606;FS=4.276;HRun=2;HaplotypeScore=64.7869;InbreedingCoeff=0.9981;MQ=82.01;MQ0=0;MQRankSum=-3.104;QD=45.55;ReadPosRankSum=2.711;VQSLOD=4.0608;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:1,27:28:81.28:1295,81,0	0/0:7,0:7:21.07:0,21,293	0/0:28,0:28:78.20:0,78,1048	0/0:21,0:21:63.15:0,63,830	1/1:1,30:31:90.31:1439,90,0	1/1:0,26:26:75.26:1199,75,0	1/1:0,18:18:48.16:767,48,0	0/0:30,0:29:90.28:0,90,1211	1/1:0,20:20:54.18:863,54,0	0/0:21,0:21:57.19:0,57,797	0/0:13,0:13:39.13:0,39,543	1/1:0,19:20:57.19:896,57,0	0/0:28,0:28:81.26:0,81,1118	0/0:14,0:14:42.13:0,42,570	0/0:21,0:21:63.21:0,63,881	0/0:27,0:27:78.26:0,78,1089	1/1:0,25:24:75.26:1199,75,0	0/0:14,0:14:42.14:0,42,587	0/0:25,0:25:69.23:0,69,960	0/0:27,0:27:81.26:0,81,1110	0/0:18,0:18:54.15:0,54,735	0/0:19,0:19:51.16:0,51,686	1/1:1,17:18:51.17:812,51,0	1/1:0,21:21:60.20:959,60,0	0/0:24,0:24:69.19:0,69,935	0/0:25,0:25:75.25:0,75,1046	0/0:31,0:31:93.28:0,93,1274	0/0:6,0:6:18.06:0,18,252
chr10	33552881	.	CGT	C	3636.01	PASS	AB=0.759;AC=28;AF=0.538;AN=52;BaseQRankSum=-2.941;DP=599;FS=27.461;HRun=0;HaplotypeScore=113.8838;InbreedingCoeff=0.4802;MQ=62.68;MQ0=9;MQRankSum=2.110;QD=10.66;ReadPosRankSum=2.804;VQSLOD=1.1518;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:15.10:0,15,118	1/1:5,5:10:3.01:33,3,0	./.	./.	0/0:10,0:20:13.96:0,14,102	0/0:14,0:22:21.02:0,21,231	0/0:21,0:28:14.89:0,15,122	0/1:16,0:15:15.03:25,0,15	0/0:19,0:30:8.98:0,9,74	1/1:12,8:20:21.05:231,21,0	1/1:5,10:17:23.73:226,24,0	0/0:15,0:16:5.95:0,6,51	1/1:16,8:26:32.43:275,32,0	1/1:5,12:18:32.92:343,33,0	1/1:10,14:25:41.94:442,42,0	1/1:12,10:22:32.86:335,33,0	0/0:20,0:19:20.71:0,21,147	0/1:8,3:10:7.58:57,0,8	1/1:15,5:19:6.01:66,6,0	0/1:10,11:20:51.09:308,0,51	1/1:18,5:23:15.51:166,16,0	1/1:14,11:25:24.06:264,24,0	0/0:15,0:20:6.36:0,6,53	0/0:13,0:19:6:0,6,51	1/1:15,6:21:11.95:132,12,0	0/1:22,14:37:0.13:399,0,0	0/1:13,8:23:26.27:296,0,26	0/1:3,1:5:9:38,0,9
chr10	33553405	.	CTATAATATATATATATATATATATATATATATATATATA	C	10434.56	PASS	AB=1.000;AC=43;AF=0.860;AN=50;BaseQRankSum=3.157;DP=264;FS=5.072;HRun=0;HaplotypeScore=163.9978;InbreedingCoeff=0.4429;MQ=60.61;MQ0=9;MQRankSum=-3.591;QD=45.57;ReadPosRankSum=3.409;VQSLOD=2.8301;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:7:12.04:0,12,380	1/1:0,3:3:3.01:300,3,0	1/1:9,0:3:0.40:1,0,0	0/0:14,0:6:12.04:0,12,206	0/1:17,0:17:2.94:367,0,3	1/1:14,0:14:9.03:534,9,0	./.	1/1:15,0:9:24.08:304,24,0	1/1:6,0:6:3.01:178,3,0	1/1:5,16:18:27.08:1417,27,0	1/1:2,10:11:6.02:545,6,0	1/1:6,0:6:3.01:211,3,0	1/1:1,9:10:6.02:600,6,0	1/1:2,8:10:6.02:600,6,0	./.	1/1:1,8:9:3.01:300,3,0	1/1:15,0:15:6.02:355,6,0	1/1:5,0:4:6.02:76,6,0	1/1:7,0:7:21.07:267,21,0	1/1:2,15:17:9.03:465,9,0	./.	1/1:0,9:10:12.04:1175,12,0	1/1:10,0:10:8.64:634,9,0	0/0:3,0:3:5.87:0,6,36	1/1:2,16:18:12.04:1177,12,0	1/1:0,7:7:18.04:813,18,0	1/1:5,0:4:6.02:76,6,0	1/1:1,0:1:3.01:38,3,0
chr10	33553408	.	TAATATATATATATATATATATATATATATATATA	T	8985.13	PASS	AB=0.667;AC=35;AF=0.673;AN=52;BaseQRankSum=4.982;DP=254;FS=11.930;HRun=0;HaplotypeScore=144.2755;InbreedingCoeff=0.4625;MQ=58.69;MQ0=9;MQRankSum=-3.490;QD=45.84;ReadPosRankSum=4.279;VQSLOD=3.1305;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:7:20.96:0,21,299	1/1:3,0:3:3.01:236,3,0	0/0:8,0:2:0:0,0,0	0/0:14,0:6:11.99:0,12,167	1/1:0,18:18:23.91:836,24,0	1/1:0,15:15:9.03:814,9,0	./.	0/0:0,0:8:0:0,0,1	1/1:0,6:6:3.01:272,3,0	1/1:18,0:17:14.84:971,15,0	1/1:11,0:10:6.02:417,6,0	1/1:0,0:6:3.01:242,3,0	1/1:10,0:10:6.02:473,6,0	1/1:8,0:8:6.02:473,6,0	0/0:1,0:1:3:0,3,25	1/1:8,0:8:3.01:236,3,0	1/1:0,16:16:6.02:542,6,0	0/1:0,0:3:0.01:0,0,0	0/0:0,0:7:0:0,0,0	1/1:17,0:17:8.62:297,9,0	0/0:1,0:5:2.99:0,3,24	1/1:10,0:10:12.04:944,12,0	1/1:0,0:10:8.65:726,9,0	1/1:2,0:2:5.99:49,6,0	1/1:18,0:18:12.04:946,12,0	0/1:7,0:7:2.48:511,0,2	0/1:0,0:4:0.02:0,0,0	./.
chr10	33556702	.	G	GCATCTCCAC	1998.43	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-1.787;DP=607;FS=6.437;HRun=0;HaplotypeScore=164.4216;InbreedingCoeff=0.9798;MQ=82.49;MQ0=0;MQRankSum=-6.184;QD=79.94;ReadPosRankSum=-1.576;VQSLOD=2.6799;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,11:25:48.16:2093,48,0	0/0:5,0:5:15.05:0,15,460	0/0:22,0:22:48.19:0,48,1464	0/0:26,0:26:60.17:0,60,1633	0/0:28,0:28:78.27:0,78,2307	0/0:16,0:16:45.15:0,45,1374	0/0:28,0:28:84.29:0,84,2487	0/0:31,0:30:81.26:0,81,2226	0/0:16,0:16:48.15:0,48,1355	0/0:33,0:33:90.31:0,90,2669	0/0:16,0:16:48.16:0,48,1448	0/0:11,0:11:30.10:0,30,915	0/0:29,0:29:87.30:0,87,2560	0/0:21,0:21:63.20:0,63,1779	0/0:22,0:22:66.23:0,66,2019	0/0:26,0:26:78.27:0,78,2285	0/0:17,0:17:48.16:0,48,1469	0/0:12,0:12:33.09:0,33,933	0/0:33,0:33:93.31:0,93,2580	0/0:29,0:29:84.29:0,84,2497	0/0:23,0:23:60.21:0,60,1793	0/0:23,0:23:69.24:0,69,2101	0/0:21,0:21:57.18:0,57,1636	0/0:21,0:21:60.19:0,60,1771	0/0:13,0:13:39.11:0,39,1062	0/0:19,0:19:57.20:0,57,1684	0/0:34,0:33:93.30:0,93,2734	0/0:7,0:7:21.07:0,21,643
chr10	33556975	.	GA	G	1128.27	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.183;DP=664;FS=0.000;HRun=5;HaplotypeScore=61.6591;InbreedingCoeff=0.9823;MQ=90.12;MQ0=0;MQRankSum=-4.960;QD=28.21;ReadPosRankSum=1.483;VQSLOD=3.8898;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,37:40:99:1223,108,0	0/0:8,0:8:24.07:0,24,312	0/0:29,0:28:70.79:0,71,944	0/0:24,0:24:66.01:0,66,800	0/0:38,0:38:99:0,114,1532	0/0:27,0:27:78.14:0,78,1025	0/0:19,0:19:51.15:0,51,680	0/0:39,0:39:99:0,108,1435	0/0:28,0:28:75.25:0,75,1025	0/0:22,0:22:57.16:0,57,736	0/0:27,0:27:69.22:0,69,927	0/0:24,0:24:72.23:0,72,968	0/0:18,0:18:54.18:0,54,737	0/0:16,0:16:45.12:0,45,583	0/0:20,0:20:57.18:0,57,763	0/0:30,0:30:78.23:0,78,1021	0/0:19,0:19:51.14:0,51,664	0/0:14,0:14:39.13:0,39,533	0/0:24,0:24:60.19:0,60,805	0/0:32,0:32:90.27:0,90,1187	0/0:21,0:21:57.17:0,57,762	0/0:25,0:25:69.23:0,69,942	0/0:15,0:15:36.11:0,36,479	0/0:19,0:19:54.17:0,54,723	0/0:18,0:18:51.15:0,51,677	0/0:30,0:30:87.29:0,87,1190	0/0:30,0:30:87.28:0,87,1170	0/0:8,0:8:15.05:0,15,199
chr10	33557164	.	TG	T	1020.72	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.125;DP=625;FS=1.481;HRun=3;HaplotypeScore=59.8023;InbreedingCoeff=0.9051;MQ=92.51;MQ0=0;MQRankSum=-5.161;QD=29.16;ReadPosRankSum=2.947;VQSLOD=3.0857;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,34:35:90.28:1116,90,0	0/0:11,0:11:33.10:0,33,455	0/0:34,0:34:99:0,99,1312	0/0:25,0:25:60.83:0,61,900	0/0:25,0:25:72.20:0,72,973	0/0:30,0:30:87.28:0,87,1234	0/0:22,0:22:66.22:0,66,950	0/0:27,0:27:75.25:0,75,1064	0/0:23,0:23:66.16:0,66,908	0/0:28,0:28:81.25:0,81,1146	0/0:21,0:21:63.21:0,63,905	0/0:15,0:15:42.14:0,42,603	0/0:23,0:23:69.21:0,69,960	0/0:14,0:14:42.14:0,42,596	0/0:22,0:22:66.22:0,66,950	0/0:21,0:21:57.18:0,57,805	0/0:15,0:15:45.12:0,45,627	0/0:16,0:16:48.16:0,48,691	0/0:17,0:17:45.15:0,45,647	0/0:26,0:26:78.24:0,78,1087	0/0:26,0:26:75.25:0,75,1080	0/0:19,0:19:57.19:0,57,821	0/0:34,0:34:99:0,99,1389	0/0:18,0:18:51.11:0,51,692	0/0:26,0:26:72.23:0,72,1019	0/0:21,0:21:63.20:0,63,890	0/0:28,0:28:84.27:0,84,1190	0/0:3,0:3:6.02:0,6,86
chr10	33557663	.	C	CAAATGATGCTTCTTG	4691.09	PASS	AC=2;AF=0.037;AN=54;BaseQRankSum=-2.901;DP=709;FS=2.697;HRun=0;HaplotypeScore=294.3792;InbreedingCoeff=0.9997;MQ=92.38;MQ0=0;MQRankSum=-6.880;QD=134.03;ReadPosRankSum=-0.256;VQSLOD=4.5891;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,16:35:66.23:4691,66,0	0/0:13,0:13:39.13:0,39,1550	0/0:28,0:28:81.23:0,81,2850	0/0:33,0:33:72.86:0,73,2475	0/0:27,0:27:78.25:0,78,3158	0/0:25,0:24:72.18:0,72,2704	0/0:23,0:23:66.20:0,66,2533	0/0:37,0:37:99:0,108,3983	0/0:26,0:26:78.27:0,78,3225	0/0:21,0:21:60.19:0,60,2193	0/0:18,0:18:51.10:0,51,1618	0/0:24,0:24:69.18:0,69,2637	0/0:27,0:27:78.27:0,78,3272	0/0:25,0:25:72.25:0,72,2838	0/0:43,0:43:99:0,123,5030	0/0:30,0:30:90.26:0,90,3585	0/0:28,0:28:78.24:0,78,2941	0/0:12,0:12:36.09:0,36,1427	0/0:25,0:25:72.20:0,72,2634	0/0:28,0:28:81.26:0,81,3277	0/0:43,0:43:99:0,123,5089	0/0:29,0:29:84.27:0,84,3340	0/0:21,0:21:57.14:0,57,1915	0/0:27,0:27:81.25:0,81,3329	0/0:12,0:12:36.11:0,36,1526	0/0:28,0:28:84.26:0,84,3085	0/0:21,0:21:60.19:0,60,2375	./.
chr10	33557944	.	ATCGGGAGAAGGAAGCCAAT	A	770.59	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.206;DP=665;FS=0.000;HRun=0;HaplotypeScore=320.3687;InbreedingCoeff=0.9622;MQ=91.83;MQ0=0;MQRankSum=-4.164;QD=85.62;ReadPosRankSum=0.016;VQSLOD=2.1496;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,6:9:18.06:861,18,0	0/0:18,0:18:54.19:0,54,4689	0/0:23,0:23:66.23:0,66,4194	0/0:31,0:31:78.27:0,78,5798	0/0:32,0:32:96.29:0,96,7315	0/0:36,0:36:99:0,108,8954	0/0:21,0:21:63.20:0,63,4961	0/0:37,0:37:99:0,108,7801	0/0:30,0:30:87.28:0,87,7385	0/0:34,0:34:99:0,102,8077	0/0:23,0:23:69.22:0,69,5744	0/0:18,0:18:54.17:0,54,4086	0/0:24,0:24:72.25:0,72,6157	0/0:13,0:13:39.13:0,39,3207	0/0:24,0:24:72.25:0,72,5705	0/0:28,0:28:84.29:0,84,7369	0/0:23,0:23:69.24:0,69,5612	0/0:14,0:14:39.11:0,39,3012	0/0:17,0:16:51.14:0,51,3157	0/0:28,0:28:78.25:0,78,6338	0/0:20,0:20:60.19:0,60,4618	0/0:28,0:28:84.29:0,84,7292	0/0:21,0:21:63.20:0,63,4996	0/0:21,0:21:63.22:0,63,4957	0/0:24,0:24:69.24:0,69,6102	0/0:35,0:35:99:0,105,7956	0/0:29,0:27:87.30:0,87,7095	0/0:4,0:4:12.04:0,12,1115
chr10	33557967	.	ACAT	A	263.76	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.428;DP=677;FS=1.419;HRun=0;HaplotypeScore=94.7457;InbreedingCoeff=0.9658;MQ=92.91;MQ0=0;MQRankSum=-4.148;QD=37.68;ReadPosRankSum=-0.234;VQSLOD=4.4869;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,7:7:21.07:356,21,0	0/0:19,0:19:57.19:0,57,1272	0/0:23,0:23:60.21:0,60,1307	0/0:34,0:34:90.31:0,90,1893	0/0:29,0:29:84.27:0,84,1860	0/0:39,0:39:99:0,117,2577	0/0:23,0:23:69.24:0,69,1583	0/0:42,0:42:99:0,105,2372	0/0:34,0:34:99:0,102,2312	0/0:28,0:28:81.28:0,81,1834	0/0:27,0:27:78.27:0,78,1738	0/0:22,0:22:60.21:0,60,1353	0/0:21,0:21:63.22:0,63,1451	0/0:11,0:11:33.11:0,33,760	0/0:22,0:22:66.21:0,66,1435	0/0:24,0:24:72.23:0,72,1613	0/0:25,0:25:75.26:0,75,1722	0/0:11,0:11:33.08:0,33,712	0/0:15,0:15:42.14:0,42,951	0/0:32,0:32:93.32:0,93,2139	0/0:21,0:21:60.18:0,60,1307	0/0:31,0:31:90.29:0,90,2016	0/0:21,0:21:63.22:0,63,1453	0/0:19,0:19:54.19:0,54,1238	0/0:25,0:25:75.26:0,75,1730	0/0:25,0:25:72.24:0,72,1586	0/0:43,0:41:99:0,129,2968	0/0:4,0:4:12.04:0,12,277
chr10	33558950	.	T	TA	506.91	PASS	AB=0.790;AC=2;AF=0.036;AN=56;BaseQRankSum=-0.208;DP=560;FS=14.600;HRun=6;HaplotypeScore=71.4266;InbreedingCoeff=-0.0228;MQ=59.34;MQ0=8;MQRankSum=1.069;QD=10.14;ReadPosRankSum=0.463;VQSLOD=0.6073;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:8,20:28:20.02:581,0,20	0/0:6,0:6:15.03:0,15,153	0/1:21,0:7:5.68:6,0,86	0/0:15,0:10:26.85:0,27,255	0/0:23,0:23:57.13:0,57,582	0/0:21,0:21:60.09:0,60,600	0/0:12,0:12:36.08:0,36,367	0/0:35,0:33:93.10:0,93,907	0/0:21,0:21:57.13:0,57,581	0/0:13,0:13:33.07:0,33,336	0/0:21,0:21:63.01:0,63,627	0/0:9,0:9:27.06:0,27,275	0/0:15,0:15:45.10:0,45,458	0/0:25,0:25:72.14:0,72,726	0/0:13,0:13:36.08:0,36,367	0/0:14,0:13:42.10:0,42,428	0/0:39,0:39:80.41:0,80,987	0/0:25,0:25:66.14:0,66,672	0/0:20,0:14:33.07:0,33,332	0/0:29,0:29:78.17:0,78,794	0/0:19,0:19:54.11:0,54,545	0/0:11,0:11:33.06:0,33,329	0/0:15,0:15:39.09:0,39,398	0/0:25,0:25:58.85:0,59,609	0/0:18,0:18:54.10:0,54,543	0/0:24,0:24:69.15:0,69,703	0/0:31,0:31:93.21:0,93,948	0/0:11,0:10:24.05:0,24,245
chr10	33559892	.	GA	G	629.15	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=8.109;DP=668;FS=14.264;HRun=8;HaplotypeScore=65.3484;InbreedingCoeff=0.9789;MQ=58.74;MQ0=6;MQRankSum=-3.501;QD=18.50;ReadPosRankSum=1.313;VQSLOD=2.3675;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,31:32:75.11:724,75,0	0/0:7,0:8:23.91:0,24,268	0/0:11,0:7:14.71:0,15,138	0/0:19,0:14:36:0,36,401	0/0:27,0:27:75.23:0,75,905	0/0:29,0:29:75.23:0,75,906	0/0:17,0:17:36.11:0,36,435	0/0:28,0:25:60.18:0,60,715	0/0:18,0:18:51.16:0,51,616	0/0:32,0:31:93.28:0,93,1118	0/0:29,0:29:75.23:0,75,906	0/0:17,0:16:45.14:0,45,543	0/0:17,0:17:51.15:0,51,606	0/0:21,0:21:57.17:0,57,672	0/0:22,0:22:60.18:0,60,725	0/0:22,0:22:51.16:0,51,616	0/0:36,0:35:90.27:0,90,1081	0/0:16,0:16:36.09:0,36,421	0/0:26,0:24:69.21:0,69,834	0/0:30,0:30:87.22:0,87,1035	0/0:12,0:11:24.07:0,24,290	0/0:27,0:27:78.24:0,78,942	0/0:23,0:21:57.17:0,57,688	0/0:28,0:28:81.23:0,81,966	0/0:25,0:25:69.21:0,69,828	0/0:40,0:40:96.29:0,96,1160	0/0:37,0:36:99:0,105,1256	0/0:17,0:17:51.14:0,51,604
chr10	33560280	.	G	GT	442.02	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.519;DP=628;FS=2.190;HRun=4;HaplotypeScore=76.9888;InbreedingCoeff=0.9550;MQ=66.87;MQ0=0;MQRankSum=-1.694;QD=29.47;ReadPosRankSum=-0.633;VQSLOD=3.2285;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,14:15:40.68:537,41,0	0/0:6,0:6:15.04:0,15,170	0/0:18,0:17:48.06:0,48,505	0/0:15,0:15:34.64:0,35,368	0/0:29,0:29:78.20:0,78,873	0/0:25,0:25:66.19:0,66,749	0/0:18,0:18:54.14:0,54,602	0/0:34,0:34:96.25:0,96,1066	0/0:24,0:24:72.17:0,72,790	0/0:28,0:28:69.20:0,69,783	0/0:26,0:26:72.17:0,72,796	0/0:12,0:12:33.09:0,33,374	0/0:20,0:20:57.15:0,57,636	0/0:29,0:29:84.22:0,84,942	0/0:15,0:15:39.09:0,39,431	0/0:22,0:22:66.15:0,66,734	0/0:27,0:27:75.20:0,75,839	0/0:24,0:24:60.06:0,60,639	0/0:18,0:18:42.12:0,42,476	0/0:29,0:29:84.24:0,84,952	0/0:28,0:28:78.18:0,78,861	0/0:32,0:32:81.12:0,81,888	0/0:25,0:25:66.17:0,66,738	0/0:19,0:19:51.05:0,51,561	0/0:15,0:15:39.08:0,39,424	0/0:29,1:30:40.18:0,40,844	0/0:38,0:38:99:0,111,1258	0/0:7,0:7:12.03:0,12,136
chr10	33560480	.	G	GC	1335.29	PASS	AB=0.994;AC=22;AF=0.393;AN=56;BaseQRankSum=-8.149;DP=445;FS=16.961;HRun=9;HaplotypeScore=97.2066;InbreedingCoeff=0.2355;MQ=68.65;MQ0=0;MQRankSum=-0.446;QD=4.79;ReadPosRankSum=-0.937;VQSLOD=0.0784;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:35.19:0,35,106	0/0:4,0:4:3.06:0,3,9	0/0:12,0:11:14.86:0,15,114	0/1:13,0:12:8.97:9,0,66	1/1:17,0:17:19.41:146,19,0	1/1:19,0:19:26.66:179,27,0	1/1:17,0:17:35.72:271,36,0	1/1:13,5:18:14.19:118,14,0	1/1:17,0:17:35.14:232,35,0	0/1:12,0:12:8.59:17,0,9	0/1:22,0:22:23.29:23,0,55	0/0:10,0:10:26.98:0,27,232	0/0:11,0:11:3.50:0,3,35	0/1:22,0:22:55.29:76,0,55	0/0:17,0:17:20.22:0,20,60	0/1:19,0:19:5.15:5,0,38	1/1:17,0:17:38.51:270,39,0	0/0:13,0:13:18.39:0,18,70	0/1:17,0:17:3.51:4,0,49	0/1:16,1:17:39.80:64,0,40	0/1:18,0:18:25.32:26,0,25	0/1:14,0:14:41.72:48,0,42	0/0:18,0:18:50.95:0,51,437	0/0:7,0:7:14.95:0,15,120	0/0:24,0:24:4.72:0,5,62	0/1:19,0:19:15.18:33,0,15	0/0:23,0:23:34.93:0,35,118	0/0:4,0:4:7.68:0,8,24
chr10	33560489	.	C	CCA	2739.30	PASS	AB=0.993;AC=17;AF=0.304;AN=56;BaseQRankSum=-9.849;DP=452;FS=24.574;HRun=0;HaplotypeScore=100.4403;InbreedingCoeff=0.3455;MQ=72.18;MQ0=0;MQRankSum=-0.757;QD=12.80;ReadPosRankSum=-1.191;VQSLOD=1.5369;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:47.69:0,48,225	0/0:2,0:2:5.34:0,5,21	0/0:16,0:15:31.24:0,31,356	0/0:12,0:13:6.13:0,6,149	1/1:1,0:19:7.75:150,8,0	1/1:1,18:19:27.09:496,27,0	1/1:0,16:16:42.09:707,42,0	0/1:11,0:11:36.50:40,0,37	1/1:0,17:19:38.40:647,38,0	0/0:16,0:16:4.82:0,5,77	0/1:22,0:22:3.73:4,0,147	0/0:10,0:10:30.06:0,30,387	0/0:13,0:13:14.09:0,14,102	0/1:18,0:18:67.58:68,0,121	0/0:17,0:17:42.97:0,43,180	0/1:18,1:19:18.79:19,0,127	1/1:0,17:19:39.13:700,39,0	0/0:15,0:15:41.41:0,41,189	0/0:16,0:17:18.21:0,18,159	0/1:20,0:20:51.37:51,0,114	0/1:15,0:15:7.95:8,0,104	0/1:17,0:17:31.03:31,0,128	0/0:19,0:19:57.11:0,57,747	0/0:7,0:7:17.96:0,18,177	0/0:20,0:21:18.78:0,19,178	0/0:23,0:23:2.05:0,2,125	0/0:23,0:23:55.75:0,56,254	0/0:4,0:4:11.04:0,11,48
chr10	33560618	.	CA	C	2595.54	PASS	AB=0.681;AC=30;AF=0.536;AN=56;BaseQRankSum=-4.270;DP=402;FS=2.268;HRun=13;HaplotypeScore=56.3036;InbreedingCoeff=0.4590;MQ=59.59;MQ0=6;MQRankSum=2.867;QD=9.98;ReadPosRankSum=0.283;VQSLOD=2.8421;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:36.06:0,36,349	1/1:0,3:3:8.95:66,9,0	0/1:22,2:9:22.02:22,0,75	0/0:13,0:8:7.45:0,7,83	0/0:8,0:19:26.62:0,27,135	0/0:4,0:16:25.73:0,26,143	0/0:6,0:14:22.89:0,23,129	1/1:10,8:17:25.85:181,26,0	0/0:8,0:11:16.29:0,16,101	1/1:4,9:14:2.68:174,3,0	1/1:5,14:18:12.55:255,13,0	0/0:3,0:10:11.36:0,11,58	0/1:5,5:10:14.29:70,0,14	1/1:6,7:13:20.84:153,21,0	1/1:8,10:18:38.57:261,39,0	0/1:5,11:16:13.76:145,0,14	0/0:12,0:25:36.85:0,37,187	0/1:13,10:25:17.09:212,0,17	0/1:6,6:12:9.27:93,0,9	1/1:5,12:18:37.82:268,38,0	0/1:4,5:11:33.39:96,0,33	1/1:1,6:7:17.89:131,18,0	0/0:2,0:6:0.53:0,1,11	0/0:2,0:12:19.89:0,20,100	1/1:3,6:9:19.93:137,20,0	1/1:4,11:15:1.51:150,2,0	1/1:5,14:19:23.42:294,23,0	1/1:0,6:6:11.93:88,12,0
chr10	33562140	.	GA	G	507.04	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.371;DP=564;FS=5.611;HRun=3;HaplotypeScore=56.2406;InbreedingCoeff=0.8488;MQ=58.66;MQ0=3;MQRankSum=-1.279;QD=26.69;ReadPosRankSum=0.769;VQSLOD=2.5824;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,17:19:31.65:601,32,0	0/0:7,0:7:21.06:0,21,285	0/0:20,0:13:17.18:0,17,465	0/0:17,0:13:31.64:0,32,415	0/0:30,0:30:59.48:0,59,1105	0/0:24,0:24:72.11:0,72,1002	0/0:10,0:10:30.10:0,30,430	0/0:35,0:33:93.13:0,93,1261	0/0:18,0:18:54.17:0,54,758	0/0:21,0:21:60.20:0,60,845	0/0:24,0:24:66.18:0,66,918	0/0:16,0:16:48.15:0,48,671	0/0:19,0:19:57.19:0,57,815	0/0:13,0:13:39.12:0,39,542	0/0:21,0:21:57.18:0,57,801	0/0:22,0:22:66.18:0,66,921	0/0:17,1:18:3.87:0,4,614	0/0:25,0:24:69.21:0,69,951	0/0:21,0:19:57.15:0,57,776	0/0:24,0:24:69.22:0,69,966	0/0:15,0:15:45.14:0,45,626	0/0:19,0:19:54.15:0,54,706	0/0:22,0:22:66.16:0,66,904	0/0:14,1:15:42.12:0,42,580	0/0:17,1:18:17.28:0,17,669	0/0:26,0:26:75.25:0,75,1059	0/0:31,0:31:93.30:0,93,1310	0/0:14,0:14:42.14:0,42,601
chr10	33562215	.	AGGCAGGT	A	617.10	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.696;DP=591;FS=7.550;HRun=0;HaplotypeScore=119.4001;InbreedingCoeff=0.9263;MQ=52.32;MQ0=22;MQRankSum=-4.892;QD=47.47;ReadPosRankSum=1.513;VQSLOD=3.3743;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,11:13:27.09:711,27,0	0/0:9,0:9:27.09:0,27,1049	0/0:23,0:6:17.55:0,18,599	0/0:31,0:6:18.06:0,18,724	0/0:23,0:23:57.20:0,57,2107	0/0:22,0:22:66.23:0,66,2530	0/0:13,0:13:39.13:0,39,1565	0/0:32,0:31:87.30:0,87,3438	0/0:21,0:21:57.18:0,57,2177	0/0:30,0:26:72.25:0,72,2612	0/0:26,0:26:66.23:0,66,2537	0/0:25,0:25:72.25:0,72,2811	0/0:18,0:18:48.16:0,48,1829	0/0:21,0:21:63.22:0,63,2520	0/0:23,0:23:66.23:0,66,2580	0/0:20,0:20:60.21:0,60,2360	0/0:15,0:15:42.14:0,42,1643	0/0:31,0:31:87.27:0,87,3195	0/0:27,0:24:72.24:0,72,2647	0/0:31,0:30:75.26:0,75,2865	0/0:18,0:18:45.15:0,45,1720	0/0:19,0:19:51.17:0,51,1834	0/0:14,0:13:33.11:0,33,1231	0/0:9,0:9:24.08:0,24,928	0/0:26,0:25:60.21:0,60,2265	0/0:19,0:18:54.19:0,54,2048	0/0:29,0:29:84.29:0,84,3264	0/0:3,0:3:9.03:0,9,307
chr10	33562947	.	A	AT	518.48	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.164;DP=585;FS=0.000;HRun=3;HaplotypeScore=69.1144;InbreedingCoeff=0.7461;MQ=47.82;MQ0=33;MQRankSum=3.394;QD=25.92;ReadPosRankSum=0.208;VQSLOD=2.6895;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,15:20:45.14:613,45,0	0/0:4,0:4:12.04:0,12,143	0/0:14,0:2:6.02:0,6,72	0/0:15,0:1:2.88:0,3,15	0/0:22,0:21:51.09:0,51,579	0/0:33,0:33:90.23:0,90,1042	0/0:18,0:16:42.08:0,42,474	0/0:30,0:17:45.04:0,45,496	0/0:23,0:23:66.17:0,66,775	0/0:31,0:31:90.26:0,90,1062	0/0:17,0:17:48.13:0,48,562	0/0:19,0:18:48.13:0,48,563	0/0:31,0:31:84.24:0,84,994	0/0:17,0:17:48.13:0,48,563	0/0:27,0:27:78.24:0,78,933	0/0:19,0:19:53.99:0,54,592	0/0:24,0:23:69.15:0,69,797	0/0:16,0:16:39.11:0,39,456	0/0:26,0:19:51.15:0,51,612	0/0:24,0:24:69.21:0,69,827	0/0:15,0:14:42.10:0,42,479	0/0:17,0:17:44.73:0,45,513	0/0:17,0:16:48.06:0,48,545	0/0:22,0:22:54.13:0,54,632	0/0:23,0:23:69.17:0,69,800	0/0:25,0:25:75.21:0,75,878	0/0:31,0:31:81.14:0,81,913	0/0:5,0:5:12.04:0,12,144
chr10	33563772	.	CCAGTCACTA	C	977.21	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.550;DP=603;FS=36.542;HRun=0;HaplotypeScore=162.8981;InbreedingCoeff=0.9834;MQ=60.91;MQ0=8;MQRankSum=-6.246;QD=51.43;ReadPosRankSum=-1.201;VQSLOD=1.2707;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,18:18:45.15:1072,45,0	0/0:6,0:6:15.05:0,15,746	0/0:29,0:13:39.13:0,39,1603	0/0:29,0:21:59.87:0,60,2648	0/0:24,0:24:72.25:0,72,3552	0/0:14,0:14:42.14:0,42,2030	0/0:17,0:17:51.13:0,51,2327	0/0:35,0:35:99:0,99,4931	0/0:19,0:19:57.20:0,57,2773	0/0:18,0:17:51.18:0,51,2385	0/0:20,0:20:60.21:0,60,2937	0/0:23,0:23:69.22:0,69,3119	0/0:15,0:15:45.15:0,45,2225	0/0:16,0:16:48.15:0,48,2304	0/0:22,0:22:66.23:0,66,3119	0/0:20,0:20:60.21:0,60,2884	0/0:23,0:23:69.24:0,69,3166	0/0:22,0:22:60.21:0,60,2812	0/0:20,0:20:60.21:0,60,2983	0/0:32,0:32:96.33:0,96,4858	0/0:34,0:34:99:0,102,5101	0/0:24,0:24:72.23:0,72,3382	0/0:19,0:19:57.20:0,57,2673	0/0:29,0:29:87.30:0,87,4077	0/0:20,0:20:60.21:0,60,2831	0/0:24,0:24:72.25:0,72,3579	0/0:21,0:21:63.22:0,63,3130	0/0:9,0:9:27.09:0,27,1360
chr10	33563783	.	TG	T	368.03	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.790;DP=610;FS=39.669;HRun=1;HaplotypeScore=67.5248;InbreedingCoeff=0.9934;MQ=60.83;MQ0=10;MQRankSum=-6.605;QD=20.45;ReadPosRankSum=-1.114;VQSLOD=1.3228;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,18:17:48.02:463,48,0	0/0:8,0:8:21.07:0,21,336	0/0:29,0:11:30.10:0,30,462	0/0:32,0:21:60.17:0,60,869	0/0:24,0:24:66.23:0,66,1055	0/0:17,0:17:51.16:0,51,792	0/0:16,0:16:48.16:0,48,761	0/0:39,0:39:99:0,117,1765	0/0:19,0:19:57.18:0,57,885	0/0:16,0:15:45.14:0,45,699	0/0:17,0:17:51.17:0,51,815	0/0:19,0:19:57.19:0,57,908	0/0:16,0:16:48.16:0,48,767	0/0:17,0:17:51.16:0,51,792	0/0:30,0:30:90.29:0,90,1416	0/0:19,0:19:57.19:0,57,909	0/0:20,0:21:60.19:0,60,953	0/0:18,0:18:54.18:0,54,854	0/0:21,0:20:60.14:0,60,887	0/0:36,0:36:99:0,108,1679	0/0:36,0:36:99:0,108,1674	0/0:23,0:23:69.24:0,69,1096	0/0:18,0:18:53.55:0,54,820	0/0:29,0:29:87.25:0,87,1360	0/0:19,0:19:57.18:0,57,874	0/0:23,0:23:69.24:0,69,1103	0/0:22,0:22:66.23:0,66,1055	0/0:8,0:8:24.08:0,24,383
chr10	33564286	.	T	TA	800.62	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.836;DP=547;FS=4.998;HRun=8;HaplotypeScore=58.1735;InbreedingCoeff=0.9287;MQ=68.14;MQ0=11;MQRankSum=0.252;QD=28.59;ReadPosRankSum=0.618;VQSLOD=4.0234;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,25:28:78.23:895,78,0	0/0:7,0:7:19.82:0,20,169	0/0:21,0:14:26.94:0,27,292	0/0:13,0:9:8.99:0,9,82	0/0:23,0:23:57.01:0,57,516	0/0:26,0:26:66.01:0,66,595	0/0:7,0:7:18:0,18,165	0/0:27,0:27:53.99:0,54,490	0/0:20,0:20:60.03:0,60,549	0/0:27,0:27:75.04:0,75,684	0/0:22,0:22:66.02:0,66,595	0/0:23,0:23:65.71:0,66,587	0/0:12,0:11:33.02:0,33,302	0/0:25,0:25:66:0,66,595	0/0:17,0:17:42.02:0,42,384	0/0:12,0:12:30.01:0,30,275	0/0:18,0:18:54:0,54,487	0/0:11,0:11:23.96:0,24,211	0/0:23,0:22:47.99:0,48,432	0/0:28,0:28:81.04:0,81,741	0/0:16,0:16:38.98:0,39,347	0/0:12,0:12:36:0,36,324	0/0:18,0:18:48.02:0,48,439	0/0:20,0:20:48.01:0,48,435	0/0:25,0:25:66.01:0,66,596	0/0:12,0:12:29.98:0,30,269	0/0:36,0:35:99:0,102,922	0/0:18,0:17:38.51:0,39,356
chr10	33565171	.	TACACACACACACAC	T	3725.63	PASS	AB=0.906;AC=32;AF=0.727;AN=44;BaseQRankSum=3.414;DP=407;FS=5.179;HRun=0;HaplotypeScore=144.3222;InbreedingCoeff=0.1742;MQ=65.41;MQ0=17;MQRankSum=0.960;QD=12.98;ReadPosRankSum=2.938;VQSLOD=2.0040;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	1/1:3,3:7:9.03:337,9,0	0/0:20,0:12:3.01:0,3,108	0/0:22,0:17:8.82:0,9,173	./.	./.	./.	0/1:19,0:17:39.16:100,0,39	1/1:8,0:12:3.01:105,3,0	1/1:13,3:16:15.04:475,15,0	0/1:16,2:19:3.64:4,0,19	1/1:4,0:9:12.04:228,12,0	1/1:10,5:15:9.03:278,9,0	./.	1/1:17,0:17:6.02:194,6,0	1/1:18,1:20:5.52:206,6,0	0/1:14,0:13:0:0,0,0	0/0:5,0:3:1.82:0,2,5	1/1:11,2:12:5.54:397,6,0	1/1:14,0:13:3.01:38,3,0	0/1:17,2:18:0:0,0,0	./.	1/1:20,0:19:3.89:53,4,0	0/1:22,0:22:99:135,0,131	1/1:11,0:12:1.59:113,2,0	1/1:6,6:12:21.07:719,21,0	1/1:20,0:21:2.59:216,3,0	0/1:2,0:4:99:128,0,126
chr10	33565199	.	CACACACACACACACACAGAGAGAGAGAGAGAGAG	C	1578.86	PASS	AB=1.000;AC=14;AF=0.259;AN=54;BaseQRankSum=3.839;DP=460;FS=23.147;HRun=0;HaplotypeScore=250.0412;InbreedingCoeff=-0.2469;MQ=41.50;MQ0=36;MQRankSum=-0.835;QD=6.32;ReadPosRankSum=4.757;VQSLOD=0.8554;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:9:1.25:0,1,3	0/1:10,0:10:99:206,0,228	0/0:4,0:1:3.01:0,3,130	0/0:8,0:3:9.03:0,9,231	0/0:16,0:15:15.05:0,15,1227	0/0:16,0:14:15.05:0,15,1143	0/0:16,0:13:5.30:0,5,249	0/1:20,0:18:17.23:17,0,403	0/1:16,0:15:97.47:97,0,1575	0/1:22,0:21:99:183,0,743	0/0:15,0:15:9.50:0,10,228	0/1:14,0:14:91.17:91,0,298	0/1:14,0:13:15.96:16,0,501	./.	1/1:7,16:22:5.75:532,6,0	0/1:21,0:21:11.64:12,0,57	0/0:10,0:9:18.06:0,18,1370	0/0:7,0:3:8.95:0,9,138	0/1:16,0:14:99:192,0,803	0/1:24,0:22:12.58:14,0,13	0/0:18,0:14:6.02:0,6,132	0/0:11,0:10:3:0,3,25	0/1:24,0:23:32.54:33,0,40	0/1:23,0:21:99:146,0,177	0/0:28,0:27:3.48:0,3,77	0/1:23,0:21:99:186,0,863	0/0:32,0:30:19.38:0,19,336	0/0:6,0:4:12.04:0,12,342
chr10	33565201	.	CACACACACACACACAGAGAGAG	C	5594.69	PASS	AB=0.989;AC=30;AF=0.577;AN=52;BaseQRankSum=4.995;DP=450;FS=18.914;HRun=0;HaplotypeScore=169.1640;InbreedingCoeff=0.2494;MQ=41.33;MQ0=35;MQRankSum=-1.225;QD=16.41;ReadPosRankSum=5.348;VQSLOD=2.5266;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:9:0:0,0,0	1/1:10,0:10:12.18:407,12,0	0/0:4,0:1:3.01:0,3,108	0/0:6,0:3:8.82:0,9,173	0/0:16,0:15:15.05:0,15,535	0/0:17,0:15:15.05:0,15,413	0/0:17,0:14:5.01:0,5,103	0/1:20,0:18:39.43:100,0,39	0/1:16,0:15:79.97:80,0,630	1/1:22,0:21:33.02:876,33,0	0/1:13,1:14:16.12:149,0,16	0/1:14,0:14:98.25:218,0,98	1/1:13,0:12:10.99:352,11,0	./.	1/1:21,0:20:6.02:303,6,0	1/1:8,0:21:5.16:261,5,0	0/0:9,0:8:18.06:0,18,513	0/0:7,0:3:1.82:0,2,5	1/1:16,0:14:20.49:738,20,0	1/1:13,11:22:2.77:37,3,0	1/1:18,0:14:5.89:150,6,0	./.	1/1:22,0:21:3.89:96,4,0	0/1:23,0:21:99:247,0,130	1/1:11,0:27:2.52:98,3,0	1/1:23,0:21:32.94:1000,33,0	1/1:13,17:28:3.73:292,4,0	0/1:6,0:4:99:189,0,122
chr10	33565205	.	CACACACACACAGAGAGAGAGAGAGAG	C	2702.34	PASS	AB=0.965;AC=18;AF=0.346;AN=52;BaseQRankSum=6.516;DP=442;FS=56.422;HRun=0;HaplotypeScore=190.1431;InbreedingCoeff=-0.0748;MQ=41.56;MQ0=36;MQRankSum=-4.137;QD=10.47;ReadPosRankSum=6.885;VQSLOD=0.7612;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:8:0.89:0,1,2	0/1:10,0:10:99:213,0,130	0/0:3,0:1:3.01:0,3,65	0/0:6,0:3:6.02:0,6,79	0/0:18,0:17:18.06:0,18,1244	0/0:19,0:17:21.07:0,21,1353	0/0:18,0:15:8.31:0,8,273	0/0:19,0:17:17.82:0,18,290	0/1:17,0:16:42.53:43,0,1512	0/1:18,0:17:99:271,0,345	0/0:13,0:13:6.42:0,6,42	0/1:15,0:14:99:330,0,185	0/1:13,0:12:99:110,0,265	./.	1/1:21,0:20:6.02:359,6,0	1/1:19,0:19:5.83:142,6,0	0/0:10,0:9:21.07:0,21,1292	0/0:6,0:2:3.01:0,3,78	0/1:15,0:13:99:145,0,302	0/0:24,0:22:0.39:0,0,0	0/0:15,0:11:5.03:0,5,47	./.	1/1:10,12:21:3.73:175,4,0	0/1:10,12:20:62.66:412,0,63	1/1:28,0:27:0.73:2,1,0	0/1:24,0:21:99:401,0,353	0/1:28,0:26:98.22:98,0,137	0/1:6,0:4:83.74:147,0,84
chr10	33565215	.	CAGAGAGAG	C	2060.36	PASS	AB=0.846;AC=28;AF=0.609;AN=46;BaseQRankSum=2.711;DP=449;FS=5.831;HRun=0;HaplotypeScore=137.7775;InbreedingCoeff=0.4968;MQ=42.17;MQ0=34;MQRankSum=0.308;QD=7.28;ReadPosRankSum=3.232;VQSLOD=1.6680;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:9:0.47:0,0,1	1/1:11,0:11:7.84:111,8,0	./.	./.	0/0:20,0:19:21.07:0,21,676	0/0:19,0:17:21.07:0,21,593	0/0:18,0:15:6.49:0,6,110	0/0:19,0:17:2.22:0,2,7	0/0:19,0:18:30.57:0,31,943	0/1:12,1:18:54.78:449,0,55	1/1:9,0:14:5.70:138,6,0	0/0:15,0:14:0.54:0,1,68	1/1:13,1:13:5.44:149,5,0	./.	1/1:21,0:20:6.02:113,6,0	1/1:17,1:18:2.85:67,3,0	0/0:13,0:12:24.08:0,24,627	./.	1/1:9,5:13:14.98:341,15,0	0/1:24,0:23:0:0,0,1	1/1:16,0:12:6.01:150,6,0	./.	1/1:22,0:21:4.17:20,4,0	1/1:20,0:19:6.33:108,6,0	1/1:24,2:27:2.51:13,3,0	1/1:24,0:22:17.98:420,18,0	1/1:28,0:26:1.75:65,2,0	1/1:5,0:4:3.01:64,3,0
chr10	33565230	.	AGAGAGAGAGAGAGAG	A	394.13	PASS	AB=0.941;AC=9;AF=0.167;AN=54;BaseQRankSum=4.658;DP=495;FS=0.000;HRun=0;HaplotypeScore=179.8866;InbreedingCoeff=0.3279;MQ=41.59;MQ0=32;MQRankSum=-2.964;QD=3.83;ReadPosRankSum=0.775;VQSLOD=2.5757;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:11:4.26:0,4,72	0/0:11,0:11:22.45:0,22,358	0/0:13,0:4:12.04:0,12,632	0/0:14,0:4:12.04:0,12,232	0/0:21,0:20:30.10:0,30,1737	0/0:22,0:20:33.11:0,33,1908	0/0:19,0:16:14.02:0,14,516	0/0:27,0:26:75.14:0,75,1794	0/0:21,0:20:45.58:0,46,2498	0/0:18,0:17:46.89:0,47,882	0/0:19,0:19:18.39:0,18,336	0/1:11,3:13:42.91:43,0,195	0/0:17,0:16:29.53:0,30,607	./.	1/1:20,0:19:6.02:180,6,0	0/0:19,0:19:0.10:0,0,260	0/0:17,0:16:36.12:0,36,1803	0/0:5,0:2:3.01:0,3,105	0/0:18,0:17:49.14:0,49,1001	0/0:26,0:25:9.97:0,10,232	0/0:13,0:11:6.01:0,6,68	0/0:14,0:13:3.01:0,3,118	1/1:15,6:19:3.90:56,4,0	1/1:15,3:16:9.93:218,10,0	0/0:23,0:22:2.63:0,3,37	0/1:24,0:21:7.31:7,0,955	0/0:29,0:26:16.45:0,16,416	0/1:6,0:4:23.10:23,0,121
chr10	33567182	.	GA	G	3106.13	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=13.173;DP=616;FS=0.000;HRun=9;HaplotypeScore=62.1064;InbreedingCoeff=0.9851;MQ=72.90;MQ0=0;MQRankSum=-2.641;QD=22.51;ReadPosRankSum=2.337;VQSLOD=4.4468;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,31:33:87.05:796,87,0	0/0:10,0:10:27.08:0,27,312	0/0:18,0:18:14.59:0,15,388	0/0:20,1:20:15.10:0,15,381	1/1:1,23:24:66.04:603,66,0	1/1:2,26:28:69.04:632,69,0	1/1:1,18:19:48.03:439,48,0	0/0:36,0:36:99:0,99,1134	1/1:2,16:18:45.02:412,45,0	0/0:27,0:27:72.20:0,72,823	0/0:14,0:14:30.09:0,30,344	0/0:18,0:18:54.13:0,54,610	0/0:26,0:26:78.21:0,78,887	0/0:26,0:26:66.19:0,66,755	0/0:28,0:28:75.22:0,75,866	0/0:23,0:22:69.18:0,69,777	1/1:0,16:16:45.02:412,45,0	0/0:9,1:10:18.01:0,18,193	0/0:12,0:12:33.09:0,33,373	0/0:28,0:28:69.20:0,69,788	0/0:17,0:17:48.13:0,48,544	0/0:25,0:25:72.21:0,72,831	0/0:27,0:27:69.20:0,69,793	0/0:29,0:28:78.23:0,78,900	0/0:20,0:20:52.40:0,52,592	0/0:26,0:28:84.05:0,84,928	0/0:31,0:31:84.01:0,84,926	0/0:4,0:4:11.99:0,12,124
chr10	33567451	.	T	TG	6542.78	PASS	AB=0.929;AC=19;AF=0.339;AN=56;BaseQRankSum=-14.656;DP=524;FS=1.142;HRun=4;HaplotypeScore=49.3905;InbreedingCoeff=0.8985;MQ=85.47;MQ0=0;MQRankSum=-1.438;QD=32.39;ReadPosRankSum=2.341;VQSLOD=5.2841;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,22:24:66.22:902,66,0	0/0:4,0:4:12.03:0,12,136	0/0:16,0:16:32.87:0,33,341	0/0:18,0:18:39.09:0,39,422	1/1:1,20:21:51.17:698,51,0	1/1:1,28:29:72.24:985,72,0	1/1:2,22:24:62.82:861,63,0	0/0:34,0:33:78.19:0,78,862	1/1:1,15:16:39.13:533,39,0	0/0:19,0:19:57.16:0,57,647	0/0:20,0:20:57.16:0,57,646	1/1:1,20:21:51.17:693,51,0	0/0:15,0:15:45.13:0,45,508	0/0:12,0:12:36.10:0,36,408	0/0:26,0:26:72.19:0,72,809	0/1:12,1:13:13.97:14,0,245	1/1:1,10:10:30.10:410,30,0	0/0:7,0:7:15.04:0,15,170	0/0:28,0:28:78.20:0,78,867	0/0:27,0:27:78.22:0,78,885	0/0:27,0:27:69.19:0,69,783	0/0:15,0:15:42.12:0,42,476	1/1:5,14:19:45.10:584,45,0	1/1:0,24:24:63.21:862,63,0	0/0:7,0:7:15.04:0,15,170	0/0:21,0:21:60.11:0,60,658	0/0:24,0:24:72.15:0,72,793	0/0:2,0:2:6.02:0,6,68
chr10	33567560	.	G	GA	3728.77	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-3.781;DP=560;FS=6.438;HRun=9;HaplotypeScore=60.0664;InbreedingCoeff=0.9684;MQ=74.69;MQ0=1;MQRankSum=-0.886;QD=19.94;ReadPosRankSum=3.924;VQSLOD=4.2303;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,2:25:23.80:0,24,435	0/0:11,0:11:29.99:0,30,260	0/0:24,0:19:8.76:0,9,205	0/0:12,0:10:8.11:0,8,60	1/1:5,34:39:96.22:1046,96,0	1/1:2,26:28:66.18:730,66,0	1/1:3,15:18:36.10:398,36,0	0/0:26,1:27:32.77:0,33,513	1/1:4,15:19:13.05:372,13,0	0/0:31,0:31:80.97:0,81,701	0/0:19,0:19:20.74:0,21,340	1/1:6,1:24:39.77:199,40,0	0/0:13,0:13:35.99:0,36,313	0/0:14,0:14:26.93:0,27,225	0/0:19,0:19:50.98:0,51,442	0/0:20,1:21:29.81:0,30,487	1/1:1,17:18:48.13:531,48,0	0/0:8,0:8:14.97:0,15,130	0/0:20,0:20:56.99:0,57,495	0/0:20,0:20:21.12:0,21,410	0/0:8,0:8:24:0,24,208	0/0:13,0:13:32.99:0,33,286	1/1:1,1:25:57.18:310,57,0	1/1:1,0:16:28.41:142,28,0	0/0:19,0:19:53.98:0,54,469	0/0:28,0:28:74.96:0,75,651	0/0:32,0:32:92.90:0,93,797	0/0:8,0:8:24:0,24,208
chr10	33568039	.	TTCTC	T	77.49	PASS	AC=2;AF=0.040;AN=50;BaseQRankSum=-0.072;DP=558;FS=8.347;HRun=0;HaplotypeScore=100.7307;InbreedingCoeff=0.2638;MQ=71.05;MQ0=11;MQRankSum=-0.631;QD=4.56;ReadPosRankSum=-0.342;VQSLOD=1.4750;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:9.02:0,9,116	0/0:13,0:13:6.02:0,6,136	./.	./.	0/0:33,0:32:3:0,3,25	0/0:16,0:16:9.02:0,9,117	1/1:7,10:16:12.02:162,12,0	0/0:28,0:28:3.01:0,3,36	0/0:8,0:9:5.74:0,6,37	0/0:24,0:23:9.03:0,9,163	0/0:23,0:23:3.01:0,3,62	0/0:12,0:12:3.47:0,3,27	0/0:15,0:20:18.05:0,18,262	0/0:21,0:21:17.74:0,18,230	0/0:15,0:15:12.02:0,12,175	0/0:20,0:24:15.05:0,15,254	0/0:13,0:14:9.03:0,9,131	0/0:6,0:6:3.01:0,3,47	0/0:21,0:19:6.01:0,6,70	0/0:19,0:19:9.49:0,9,122	0/0:14,0:14:20.25:0,20,219	0/0:25,0:26:8.48:0,8,61	0/0:31,0:31:9.03:0,9,155	0/0:16,0:16:18.06:0,18,331	0/0:19,0:19:3.01:0,3,65	0/0:11,0:11:22.80:0,23,272	0/0:27,0:26:18.06:0,18,298	./.
chr10	33568081	.	C	CTC	982.34	PASS	AB=1.000;AC=41;AF=0.854;AN=48;BaseQRankSum=-2.358;DP=439;FS=19.901;HRun=0;HaplotypeScore=65.8537;InbreedingCoeff=0.3073;MQ=68.20;MQ0=12;MQRankSum=0.534;QD=3.13;ReadPosRankSum=-1.068;VQSLOD=0.0259;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:14:3:25,3,0	1/1:4,0:4:2.94:18,3,0	./.	./.	./.	1/1:17,0:17:3:25,3,0	0/0:26,0:25:11.45:0,11,59	1/1:20,0:19:3.49:8,3,0	0/0:17,0:17:2.58:0,3,14	1/1:17,0:16:5.49:34,5,0	1/1:8,0:8:1.55:4,2,0	1/1:8,0:8:3.43:25,3,0	1/1:16,0:15:9.03:132,9,0	1/1:15,0:14:16.05:120,16,0	1/1:14,0:14:7.55:53,8,0	1/1:22,0:22:6.17:71,6,0	1/1:11,5:17:5.97:46,6,0	1/1:8,0:8:2.98:21,3,0	1/1:10,0:10:4.72:31,5,0	1/1:14,0:14:3.47:26,3,0	1/1:14,0:14:11.99:113,12,0	0/0:15,0:15:2.84:0,3,14	1/1:16,0:15:8.97:72,9,0	1/1:19,0:18:13.24:85,13,0	1/1:16,0:16:1.81:5,2,0	1/1:23,0:22:14.23:171,14,0	0/1:22,0:21:18.99:19,0,26	./.
chr10	33569610	.	TA	T	6987.55	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=14.515;DP=608;FS=0.315;HRun=5;HaplotypeScore=64.5953;InbreedingCoeff=0.9982;MQ=83.23;MQ0=0;MQRankSum=0.140;QD=29.99;ReadPosRankSum=4.744;VQSLOD=5.1778;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,24:25:72.21:816,72,0	0/0:9,0:9:27.09:0,27,369	0/0:21,0:21:47.72:0,48,580	0/0:23,0:23:55.02:0,55,634	1/1:1,35:36:99:1156,102,0	1/1:0,34:34:99:1122,99,0	1/1:0,16:16:39.11:442,39,0	0/0:27,0:27:78.24:0,78,1038	1/1:1,27:28:75.21:849,75,0	0/0:28,0:28:78.20:0,78,1016	0/0:21,0:21:60.19:0,60,804	1/1:1,25:26:66.19:748,66,0	0/0:26,0:26:72.21:0,72,949	0/0:21,0:21:60.19:0,60,800	0/0:25,0:25:66.21:0,66,887	0/0:20,0:20:60.20:0,60,817	1/1:1,23:24:60.17:680,60,0	0/0:7,0:7:18.06:0,18,242	0/0:18,0:18:54.11:0,54,684	0/0:20,0:20:60.17:0,60,785	0/0:14,0:14:36.09:0,36,473	0/0:19,0:19:51.17:0,51,697	1/1:1,21:22:48.04:529,48,0	1/1:2,20:22:57.16:646,57,0	0/0:21,0:21:60.19:0,60,803	0/0:26,0:26:72.22:0,72,957	0/0:21,0:21:63.19:0,63,840	0/0:8,0:8:24.08:0,24,327
chr10	33570398	.	C	CA	3929.66	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-3.517;DP=600;FS=0.897;HRun=0;HaplotypeScore=83.6903;InbreedingCoeff=0.9995;MQ=78.22;MQ0=0;MQRankSum=0.100;QD=45.17;ReadPosRankSum=-0.757;VQSLOD=3.2949;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:78.26:0,78,1088	0/0:12,0:12:36.10:0,36,473	0/0:13,0:13:38.87:0,39,474	0/0:14,0:14:39.57:0,40,523	1/1:1,26:27:75.26:1198,75,0	1/1:0,21:21:60.20:958,60,0	1/1:0,10:10:30.10:479,30,0	0/0:25,0:25:75.25:0,75,1049	1/1:1,19:20:54.18:863,54,0	0/0:20,0:20:57.19:0,57,797	0/0:21,0:21:63.21:0,63,880	0/0:22,0:22:59.86:0,60,304	0/0:26,0:26:78.21:0,78,1053	0/0:21,0:21:63.20:0,63,859	0/0:31,0:31:90.29:0,90,1243	0/0:22,0:22:63.19:0,63,850	1/1:0,9:9:27.09:431,27,0	0/0:15,0:15:42.11:0,42,547	0/0:18,0:18:54.15:0,54,695	0/0:37,0:37:99:0,108,1493	0/0:28,0:28:84.28:0,84,1174	0/0:24,0:24:72.22:0,72,987	0/0:30,0:30:85.59:0,86,432	0/0:19,0:18:34.89:0,35,203	0/0:18,0:18:51.17:0,51,710	0/0:28,0:28:84.26:0,84,1143	0/0:27,0:27:81.27:0,81,1132	0/0:15,0:15:45.15:0,45,629
chr10	33571937	.	AATAT	A	2155.52	PASS	AC=30;AF=0.789;AN=38;BaseQRankSum=1.679;DP=182;FS=0.000;HRun=0;HaplotypeScore=45.4472;InbreedingCoeff=0.4185;MQ=83.56;MQ0=0;MQRankSum=-2.097;QD=15.40;ReadPosRankSum=1.978;VQSLOD=2.6577;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:2,0:2:6.02:0,6,121	1/1:3,4:7:9.03:148,9,0	0/0:5,0:5:0:0,0,0	0/0:15,0:12:2.39:0,2,11	1/1:5,0:15:21.02:196,21,0	1/1:6,0:19:30.48:274,30,0	1/1:5,0:7:5.98:49,6,0	1/1:17,16:38:49.58:788,50,0	1/1:3,0:7:6.01:56,6,0	./.	1/1:1,2:3:5.99:70,6,0	./.	./.	./.	0/0:3,0:3:3.01:0,3,38	1/1:3,2:5:3.01:50,3,0	1/1:5,0:9:5.94:41,6,0	1/1:0,4:4:6.02:99,6,0	./.	1/1:5,1:6:3.01:49,3,0	1/1:1,7:8:15.05:247,15,0	./.	./.	./.	1/1:3,1:4:3.01:49,3,0	./.	1/1:4,2:6:6.02:99,6,0	1/1:1,1:2:3.01:49,3,0
chr10	33572400	.	ACAGT	A	2936.34	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=10.102;DP=561;FS=3.420;HRun=0;HaplotypeScore=89.2699;InbreedingCoeff=0.9987;MQ=79.11;MQ0=0;MQRankSum=-4.301;QD=54.38;ReadPosRankSum=2.545;VQSLOD=5.0734;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:54.19:0,54,1564	0/0:9,0:9:27.09:0,27,782	0/0:14,0:14:42.12:0,42,1109	0/0:13,0:13:33.09:0,33,819	0/0:21,0:21:63.19:0,63,1697	0/0:25,0:25:75.24:0,75,2067	0/0:15,0:15:45.12:0,45,1179	0/0:37,0:36:99:0,111,3137	0/0:19,0:19:57.20:0,57,1627	0/0:27,0:27:75.26:0,75,2174	0/0:26,0:26:78.27:0,78,2238	1/1:0,18:18:48.16:1005,48,0	0/0:19,0:19:57.18:0,57,1589	0/0:17,0:17:51.16:0,51,1406	0/0:15,0:15:45.15:0,45,1304	0/0:21,0:21:63.22:0,63,1823	0/0:19,0:19:54.19:0,54,1564	0/0:8,0:8:24.08:0,24,686	0/0:18,0:18:54.18:0,54,1491	0/0:35,0:35:99:0,105,2980	0/0:14,0:14:42.14:0,42,1210	0/0:17,0:17:48.16:0,48,1373	1/1:0,22:22:60.10:1257,60,0	1/1:0,14:14:39.13:817,39,0	0/0:18,0:18:54.17:0,54,1495	0/0:29,0:29:87.28:0,87,2349	0/0:41,0:41:99:0,123,3351	0/0:12,0:12:36.12:0,36,1028
chr10	33576254	.	AAATTAATCATTAATTAATTAATGATTAATT	A	1361.87	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=4.526;DP=345;FS=0.000;HRun=0;HaplotypeScore=242.1038;InbreedingCoeff=0.8288;MQ=73.07;MQ0=0;MQRankSum=-4.068;QD=45.40;ReadPosRankSum=1.182;VQSLOD=2.4283;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:36.10:0,36,3201	0/0:7,0:7:15.01:0,15,545	0/0:7,0:7:4.57:0,5,74	0/0:5,0:4:8.97:0,9,71	0/0:30,0:30:81.24:0,81,7243	0/0:12,0:12:36.08:0,36,2896	0/0:6,0:6:12.03:0,12,963	0/0:32,0:31:81.21:0,81,3720	0/0:7,0:7:21.06:0,21,2350	0/0:19,0:19:48.15:0,48,4529	0/0:11,0:11:24.04:0,24,1864	1/1:2,9:11:6.02:471,6,0	0/0:11,0:11:27.02:0,27,1177	0/0:7,0:7:18.05:0,18,1673	0/0:11,0:11:21.06:0,21,2083	0/0:5,0:5:15.05:0,15,1750	0/0:24,0:24:63.15:0,63,5458	0/0:6,0:6:18.06:0,18,1632	0/0:13,0:13:33.11:0,33,3780	0/0:15,0:15:36.11:0,36,3248	0/0:8,0:8:24:0,24,1154	0/0:4,0:4:12.01:0,12,881	1/1:0,12:12:12.04:942,12,0	1/1:7,0:7:11.77:75,12,0	0/0:16,0:16:48.10:0,48,3821	0/0:19,0:19:48.13:0,48,5884	0/0:22,0:22:66.20:0,66,7157	0/0:5,0:5:15.05:0,15,2079
chr10	33576571	.	C	CA	1636.13	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=5.723;DP=335;FS=6.470;HRun=2;HaplotypeScore=47.4978;InbreedingCoeff=0.7492;MQ=71.81;MQ0=13;MQRankSum=-0.937;QD=20.98;ReadPosRankSum=1.595;VQSLOD=3.3440;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:36.71:0,37,354	0/0:5,0:5:15.02:0,15,161	0/0:33,0:14:32.91:0,33,368	0/0:21,0:10:29.84:0,30,315	1/1:1,12:13:29.10:353,29,0	1/1:1,6:7:1.32:159,1,0	1/1:4,10:14:36.46:430,36,0	0/0:24,0:24:69.05:0,69,698	1/1:1,7:8:18.02:231,18,0	0/0:12,0:12:32.79:0,33,330	0/0:6,0:6:11.99:0,12,108	0/1:10,0:10:11.79:12,0,17	0/0:9,0:9:15.98:0,16,207	0/0:12,0:12:17.85:0,18,162	0/0:10,0:10:27.05:0,27,306	0/0:8,0:8:18.04:0,18,205	1/1:4,14:18:45.61:617,46,0	0/0:3,0:3:9.01:0,9,98	0/0:12,0:12:35.95:0,36,347	0/0:10,0:10:26.97:0,27,247	0/0:17,0:16:32.84:0,33,336	0/0:6,0:6:14.90:0,15,149	0/0:6,0:6:1.85:0,2,25	1/1:8,0:8:0.47:1,0,0	0/0:14,0:14:39.05:0,39,410	0/0:11,0:11:32.99:0,33,375	0/0:15,0:15:42.05:0,42,453	0/0:6,0:6:18:0,18,175
chr10	33576573	.	A	AC	633.56	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=6.195;DP=333;FS=1.489;HRun=9;HaplotypeScore=53.6222;InbreedingCoeff=0.6568;MQ=69.70;MQ0=15;MQRankSum=0.258;QD=7.37;ReadPosRankSum=-0.196;VQSLOD=0.8117;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:20.81:0,21,172	0/0:5,0:5:8.99:0,9,78	0/0:33,0:13:29.97:0,30,256	0/0:22,0:10:20.48:0,20,179	1/1:13,0:14:20.59:132,21,0	0/1:8,0:7:10.82:57,0,11	1/1:13,0:13:0.44:125,0,0	0/0:22,1:24:31.94:0,32,265	1/1:9,0:8:14.75:104,15,0	0/0:12,0:12:20.34:0,20,163	0/0:6,0:6:2.98:0,3,26	1/1:2,8:10:2.99:25,3,0	0/0:8,0:8:11.86:0,12,94	0/0:9,0:9:5.90:0,6,52	0/0:9,0:9:20.89:0,21,168	0/0:7,0:7:14.91:0,15,121	1/1:20,0:20:41.55:307,42,0	0/0:3,0:3:5.99:0,6,52	0/0:12,0:13:19.69:0,20,147	0/0:10,0:10:11.85:0,12,88	0/0:18,0:17:17.92:0,18,156	0/0:6,0:6:8.95:0,9,71	1/1:1,5:6:3:26,3,0	1/1:2,4:6:3:25,3,0	0/0:14,0:14:20.96:0,21,182	0/0:12,0:12:26.98:0,27,234	0/0:15,0:15:32.66:0,33,253	0/0:6,0:6:8.88:0,9,64
chr10	33576582	.	CGTGTGT	C	627.76	PASS	AB=1.000;AC=25;AF=0.595;AN=42;BaseQRankSum=-1.509;DP=361;FS=4.773;HRun=0;HaplotypeScore=86.5287;InbreedingCoeff=0.5169;MQ=61.10;MQ0=28;MQRankSum=-1.937;QD=4.08;ReadPosRankSum=1.912;VQSLOD=1.1426;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:16:5.74:83,6,0	1/1:6,0:4:3.01:38,3,0	./.	./.	0/0:19,0:18:9.03:0,9,240	0/0:16,0:15:6:0,6,156	0/0:19,0:17:12.01:0,12,314	1/1:24,0:22:4.37:29,4,0	0/0:10,0:10:3.01:0,3,78	1/1:7,0:8:3.01:42,3,0	./.	0/0:11,0:11:6.02:0,6,175	1/1:7,2:9:6.02:120,6,0	1/1:9,0:9:1.23:4,1,0	./.	1/1:5,2:7:3.01:60,3,0	0/0:22,0:23:11.96:0,12,297	0/0:8,0:8:4.57:0,5,66	./.	1/1:7,0:7:3.01:60,3,0	0/1:20,0:17:0.09:1,0,0	1/1:6,3:8:6.02:120,6,0	0/0:6,0:6:3.01:0,3,78	1/1:10,0:9:0.21:0,0,0	1/1:13,0:13:5.85:36,6,0	./.	1/1:12,1:15:13.27:171,13,0	./.
chr10	33578204	.	G	GA	10169.21	PASS	AB=0.524;AC=31;AF=0.554;AN=56;BaseQRankSum=-15.142;DP=570;FS=0.320;HRun=6;HaplotypeScore=52.2622;InbreedingCoeff=0.9198;MQ=73.08;MQ0=0;MQRankSum=-1.384;QD=32.18;ReadPosRankSum=-0.422;VQSLOD=4.8895;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,114,1141	1/1:1,11:12:30.10:377,30,0	0/0:12,0:13:18.02:0,18,174	0/0:5,0:5:9.02:0,9,91	0/0:22,0:22:63.14:0,63,642	0/0:27,0:27:75.15:0,75,758	0/0:16,0:16:48.10:0,48,483	1/1:5,23:28:69.18:828,69,0	0/0:24,0:24:69.15:0,69,704	1/1:1,23:24:60.18:742,60,0	1/1:1,22:23:69.09:827,69,0	0/0:16,0:16:42.10:0,42,428	1/1:4,12:16:10.19:420,10,0	1/1:2,24:26:75.24:935,75,0	0/0:16,0:16:42.09:0,42,428	0/1:2,20:22:1.02:619,0,1	0/0:19,0:19:51.09:0,51,513	1/1:1,16:16:45.14:566,45,0	1/1:2,15:17:42.13:528,42,0	1/1:4,25:29:78.25:977,78,0	1/1:2,11:13:33.11:415,33,0	1/1:2,20:22:63.20:790,63,0	0/0:28,0:28:78.17:0,78,795	0/0:29,0:29:84.19:0,84,856	1/1:1,12:13:33.11:415,33,0	1/1:2,24:26:69.22:868,69,0	1/1:2,23:25:66.21:823,66,0	1/1:2,1:3:3.01:38,3,0
chr10	33578304	.	T	TA	1835.11	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-8.787;DP=649;FS=1.088;HRun=7;HaplotypeScore=63.6206;InbreedingCoeff=0.9537;MQ=82.07;MQ0=0;MQRankSum=-1.607;QD=28.23;ReadPosRankSum=2.119;VQSLOD=4.4141;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,126,1198	0/0:10,0:10:24.03:0,24,232	0/0:23,0:21:51.05:0,51,481	0/0:22,0:22:5.08:0,5,362	0/0:34,0:34:89.72:0,90,828	0/0:22,0:22:63.10:0,63,608	0/0:23,0:23:63.10:0,63,608	0/0:31,0:31:71.92:0,72,668	0/0:23,0:23:63.05:0,63,598	0/0:29,0:29:78.09:0,78,742	0/0:18,0:18:45.07:0,45,434	1/1:2,22:24:57.17:689,57,0	0/0:15,0:15:45.06:0,45,429	0/0:21,0:21:63.09:0,63,602	0/0:21,0:21:57.09:0,57,550	0/0:25,0:25:69.08:0,69,654	0/0:23,0:23:60.07:0,60,572	0/0:18,0:18:39.06:0,39,376	0/0:19,0:19:53.86:0,54,499	0/0:21,1:22:20.79:0,21,475	0/0:12,0:12:33.04:0,33,314	0/0:34,0:34:93.13:0,93,891	1/1:4,15:19:42.13:504,42,0	1/1:1,21:22:66.19:785,66,0	0/0:31,0:31:84.09:0,84,801	0/0:32,0:32:81.11:0,81,777	0/0:23,0:23:66.08:0,66,626	0/0:8,0:8:21:0,21,194
chr10	33580618	.	G	GGA	1181.24	PASS	AB=1.000;AC=36;AF=0.857;AN=42;DP=524;FS=0.000;HRun=0;HaplotypeScore=89.4689;InbreedingCoeff=0.2667;MQ=63.83;MQ0=9;QD=3.44;VQSLOD=1.8814;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:26:3:25,3,0	1/1:9,0:9:2.99:24,3,0	./.	./.	1/1:16,0:16:8.98:73,9,0	1/1:19,0:19:5.99:50,6,0	1/1:28,0:26:5.98:47,6,0	1/1:31,0:31:2.92:18,3,0	1/1:14,0:14:8.99:89,9,0	1/1:19,0:19:6.01:61,6,0	./.	0/0:18,0:16:0:0,0,0	1/1:10,5:15:3.48:39,3,0	0/0:7,0:7:0:0,0,0	./.	./.	1/1:20,0:19:12.89:127,13,0	1/1:5,0:5:6:51,6,0	1/1:17,0:17:14.96:122,15,0	0/1:22,0:21:0:0,0,0	1/1:22,0:22:15.02:174,15,0	1/1:18,0:18:8.89:65,9,0	./.	1/1:20,0:20:6.02:79,6,0	./.	1/1:15,0:14:10.39:88,10,0	1/1:23,0:23:16.29:123,16,0	0/1:3,0:3:0:0,0,0
chr10	33581514	.	GTA	G	2139.76	PASS	AB=1.000;AC=34;AF=0.654;AN=52;BaseQRankSum=-1.572;DP=305;FS=7.364;HRun=0;HaplotypeScore=80.5504;InbreedingCoeff=0.3362;MQ=40.99;MQ0=10;MQRankSum=0.019;QD=10.44;ReadPosRankSum=-1.205;VQSLOD=2.4788;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:7:0.47:0,0,2	1/1:7,0:7:14.97:175,15,0	1/1:5,0:2:0.35:0,0,0	0/1:12,0:6:29.89:33,0,30	0/0:15,0:14:4.88:0,5,28	0/0:15,0:15:2.36:0,2,25	0/0:17,0:16:0.07:0,0,2	1/1:1,13:13:38.89:474,39,0	1/1:19,0:19:0.79:30,1,0	1/1:1,13:13:14.86:199,15,0	./.	0/1:14,0:14:4.66:5,0,39	1/1:1,12:13:2.60:25,3,0	1/1:10,0:10:11.45:161,11,0	0/0:8,0:8:0:0,0,0	1/1:7,0:7:2.41:11,2,0	1/1:13,0:13:3:37,3,0	1/1:9,0:8:5.12:60,5,0	1/1:1,8:8:20.94:234,21,0	./.	1/1:15,1:16:8.83:104,9,0	0/0:1,0:1:0:0,0,0	1/1:7,0:6:0.76:2,1,0	0/0:10,0:9:1.17:0,1,3	0/0:2,0:2:0:0,0,0	1/1:0,17:17:39.02:504,39,0	1/1:1,12:13:3.01:38,3,0	1/1:1,5:5:12.04:163,12,0
chr10	33581982	.	ATAC	A	340.26	PASS	AB=0.940;AC=9;AF=0.161;AN=56;BaseQRankSum=-3.025;DP=352;FS=35.292;HRun=0;HaplotypeScore=96.5866;InbreedingCoeff=-0.1177;MQ=27.91;MQ0=39;MQRankSum=0.200;QD=3.54;ReadPosRankSum=-1.927;VQSLOD=0.3039;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:9:10.59:0,11,189	0/0:13,0:12:9.76:0,10,115	0/0:14,0:3:9.03:0,9,188	0/0:14,0:3:9.03:0,9,186	1/1:18,2:17:1.74:3,2,0	0/0:16,0:14:13.50:0,13,176	0/0:12,3:13:1.67:0,2,53	0/1:10,3:11:99:123,0,355	0/0:9,0:7:6.33:0,6,96	0/1:13,0:12:99:106,0,481	0/0:14,0:13:9.88:0,10,113	0/0:14,0:9:8.82:0,9,115	0/0:8,0:6:6.91:0,7,167	0/0:11,0:10:6.64:0,7,183	0/0:12,0:10:12.92:0,13,332	0/0:7,0:7:3.48:0,3,39	0/0:2,3:5:2.29:0,2,57	0/1:12,0:10:66.32:66,0,262	0/1:11,1:11:46.06:46,0,406	0/0:18,2:20:15.83:0,16,190	0/0:13,1:12:0.71:0,1,1	0/0:15,3:17:6:0,6,72	0/0:9,3:12:5.97:0,6,74	0/0:10,5:14:2.93:0,3,38	0/1:10,0:5:42.56:43,0,101	0/1:9,2:10:68.28:68,0,452	0/0:12,1:12:11.04:0,11,344	0/1:5,0:4:9.59:10,0,117
chr10	33582749	.	TTTC	T	1247.11	PASS	AB=1.000;AC=14;AF=0.250;AN=56;BaseQRankSum=12.945;DP=607;FS=0.887;HRun=0;HaplotypeScore=108.4540;InbreedingCoeff=0.6222;MQ=55.73;MQ0=12;MQRankSum=-4.848;QD=7.21;ReadPosRankSum=-0.758;VQSLOD=2.8760;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,30:30:48.12:736,48,0	0/0:10,0:10:30.09:0,30,579	0/0:32,0:8:13.35:0,13,157	0/0:27,0:12:21.70:0,22,295	1/1:40,0:39:38.23:240,38,0	1/1:21,0:20:24.16:89,24,0	1/1:11,0:11:14.75:55,15,0	0/0:17,0:16:30.90:0,31,807	0/1:12,0:11:9.80:65,0,10	0/0:28,0:28:78.07:0,78,1457	0/0:33,0:33:93.27:0,93,1801	0/1:6,0:6:19.07:62,0,19	0/0:21,0:21:63.18:0,63,1121	0/0:17,0:17:51.09:0,51,957	0/0:22,0:22:60.11:0,60,1092	0/0:27,0:26:64.17:0,64,1266	1/1:27,0:26:17.41:143,17,0	0/0:15,0:15:42.01:0,42,753	0/0:23,0:20:57.15:0,57,1065	0/0:32,0:31:87.26:0,87,1720	0/0:7,0:7:21.07:0,21,425	0/0:14,0:14:39.12:0,39,756	0/1:20,0:20:26.37:26,0,136	0/1:6,0:5:16.53:17,0,42	0/0:15,0:15:45.14:0,45,905	0/0:33,0:32:87.14:0,87,1692	0/0:46,0:46:99:0,129,2379	0/0:14,0:14:39.60:0,40,759
chr10	33582751	.	TC	T	4258.56	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=14.067;DP=611;FS=0.356;HRun=1;HaplotypeScore=81.5704;InbreedingCoeff=0.9479;MQ=55.60;MQ0=12;MQRankSum=-4.156;QD=24.33;ReadPosRankSum=-1.301;VQSLOD=4.3871;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:30:47.16:295,47,0	0/0:10,0:10:30.08:0,30,374	0/0:31,0:8:3.23:0,3,117	0/0:29,0:13:14.28:0,14,197	1/1:14,26:39:99:1373,109,0	1/1:8,14:21:48.12:631,48,0	1/1:5,8:13:33.09:409,33,0	0/0:19,0:18:29.45:0,29,557	1/1:5,7:11:32.91:360,33,0	0/0:28,0:28:81.01:0,81,981	0/0:31,0:31:93.27:0,93,1185	1/1:7,0:7:17.71:135,18,0	0/0:22,0:22:65.91:0,66,761	0/0:17,0:17:51.01:0,51,604	0/0:22,0:22:52.58:0,53,689	0/0:26,1:26:31.34:0,31,773	1/1:11,15:25:67.27:753,67,0	0/0:16,0:16:39.50:0,40,476	0/0:22,1:20:56.71:0,57,678	0/0:31,0:30:90.23:0,90,1128	0/0:8,0:8:24.07:0,24,302	0/0:14,0:14:39.11:0,39,501	1/1:20,0:20:43.20:259,43,0	1/1:5,0:4:4.65:43,5,0	0/0:15,0:15:45.13:0,45,579	0/0:33,0:32:90.04:0,90,1105	0/0:45,0:45:99:0,132,1557	0/0:15,0:15:37.83:0,38,495
chr10	33582758	.	CT	C	1613.82	PASS	AB=0.821;AC=15;AF=0.268;AN=56;BaseQRankSum=12.190;DP=598;FS=0.000;HRun=10;HaplotypeScore=87.2339;InbreedingCoeff=0.7442;MQ=56.09;MQ0=10;MQRankSum=-3.137;QD=9.90;ReadPosRankSum=0.542;VQSLOD=2.6792;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:39.06:0,39,393	0/0:11,0:11:27.07:0,27,299	0/0:28,0:8:16.19:0,16,155	0/0:26,1:14:21.03:0,21,246	1/1:13,27:40:56.67:511,57,0	1/1:5,18:22:35.94:302,36,0	1/1:2,10:12:23.94:203,24,0	0/0:20,0:20:39.10:0,39,424	1/1:6,6:11:17.91:144,18,0	0/0:27,0:27:63.13:0,63,679	0/0:33,0:33:81.22:0,81,895	1/1:6,0:6:8.80:67,9,0	0/0:18,1:19:22.05:0,22,454	0/0:15,0:15:30.07:0,30,324	0/0:21,0:22:57.07:0,57,613	0/0:20,1:22:31.52:0,32,544	1/1:10,18:27:50.19:412,50,0	0/0:16,0:16:37.31:0,37,381	0/0:20,0:18:45.12:0,45,498	0/0:33,0:33:84.04:0,84,894	0/0:8,0:8:18.01:0,18,186	0/0:12,0:13:29.91:0,30,313	0/1:16,3:19:19.03:143,0,19	0/1:4,4:8:17.81:20,0,18	0/0:16,0:16:41.96:0,42,408	0/0:31,0:33:59.83:0,60,626	0/0:39,0:39:99:0,102,1074	0/1:13,1:14:1.72:2,0,201
chr10	33582924	.	A	AACACACACACACACACAC	13531.82	PASS	AB=0.943;AC=49;AF=0.875;AN=56;BaseQRankSum=-3.950;DP=560;FS=1.672;HRun=0;HaplotypeScore=246.2528;InbreedingCoeff=0.3527;MQ=54.28;MQ0=14;MQRankSum=-2.434;QD=28.98;ReadPosRankSum=0.713;VQSLOD=3.9633;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:31,0:32:4.77:63,0,5	1/1:9,0:9:3.01:68,3,0	0/0:34,0:20:5.68:0,6,76	0/0:43,0:27:3.79:0,4,143	0/0:16,0:14:0.11:0,0,0	1/1:15,0:15:9.50:313,10,0	1/1:24,0:23:15.05:606,15,0	1/1:31,0:29:29.65:1049,30,0	1/1:24,3:28:15.52:1108,16,0	1/1:17,0:16:15.04:356,15,0	1/1:10,0:11:3.01:234,3,0	1/1:21,0:21:12.03:480,12,0	1/1:18,0:21:27.56:1209,28,0	1/1:18,0:21:12.03:441,12,0	1/1:13,1:18:6.02:487,6,0	1/1:19,0:22:16.43:654,16,0	1/1:13,0:12:6.02:191,6,0	1/1:8,0:7:6.02:348,6,0	1/1:14,0:12:14.64:563,15,0	1/1:20,0:19:3.48:92,3,0	1/1:16,0:15:14.23:486,14,0	1/1:9,3:12:3.18:253,3,0	1/1:14,0:14:3.48:91,3,0	1/1:19,0:18:5.86:125,6,0	1/1:21,4:26:12.04:756,12,0	1/1:19,1:17:18.06:1163,18,0	1/1:20,2:24:27.56:1498,28,0	1/1:5,0:5:12.04:896,12,0
chr10	33584072	.	C	CT	8283.43	PASS	AB=1.000;AC=50;AF=0.893;AN=56;BaseQRankSum=-3.561;DP=499;FS=2.523;HRun=10;HaplotypeScore=75.5849;InbreedingCoeff=0.4693;MQ=78.30;MQ0=2;MQRankSum=-5.049;QD=18.01;ReadPosRankSum=3.887;VQSLOD=5.6505;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,30:36:72.18:766,72,0	1/1:2,10:12:30.08:320,30,0	0/0:19,0:17:4.60:0,5,138	0/0:20,0:15:23.32:0,23,197	0/1:19,0:19:19.37:119,0,19	1/1:7,0:7:17.07:87,17,0	1/1:17,0:17:42.51:214,43,0	1/1:6,14:20:42.09:437,42,0	1/1:13,0:13:9.22:137,9,0	1/1:5,15:20:0.64:394,1,0	1/1:6,9:15:24.06:256,24,0	1/1:21,0:21:36.96:191,37,0	1/1:4,21:25:51.13:543,51,0	1/1:5,17:23:23.89:238,24,0	1/1:1,11:13:32.92:335,33,0	1/1:6,19:25:60.10:632,60,0	1/1:16,0:16:31.77:175,32,0	1/1:3,20:22:10.84:511,11,0	1/1:6,16:22:26.45:473,26,0	1/1:5,16:21:48.06:486,48,0	1/1:4,14:20:2.20:252,2,0	1/1:4,8:12:27.06:282,27,0	0/1:12,0:12:1.31:78,0,1	1/1:5,0:5:11.40:58,11,0	1/1:2,18:20:22.67:425,23,0	1/1:5,13:18:39.09:409,39,0	1/1:2,15:18:35.92:366,36,0	1/1:1,6:7:9.02:96,9,0
chr10	33584082	.	T	TA	4000.08	PASS	AB=1.000;AC=37;AF=0.661;AN=56;BaseQRankSum=-0.423;DP=475;FS=2.186;HRun=2;HaplotypeScore=83.4555;InbreedingCoeff=-0.1803;MQ=76.38;MQ0=2;MQRankSum=-1.919;QD=9.13;ReadPosRankSum=8.130;VQSLOD=1.0192;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:36,0:36:11.94:148,0,12	0/1:11,0:11:2.54:40,0,3	0/0:16,0:14:14.32:0,14,270	0/0:21,0:16:20.43:0,20,263	1/1:2,14:16:36.08:461,36,0	1/1:0,7:7:18.06:241,18,0	1/1:0,17:17:44.74:601,45,0	0/1:21,0:21:32.72:33,0,113	1/1:1,12:13:29.72:399,30,0	0/1:21,0:21:12.63:13,0,125	0/1:13,0:13:27.11:27,0,47	1/1:1,17:18:39.13:518,39,0	1/1:23,0:23:22.04:108,22,0	0/1:23,0:23:40.67:41,0,70	0/1:15,0:15:25.81:36,0,26	0/1:26,0:26:58.50:59,0,69	1/1:0,13:13:33.11:440,33,0	0/1:25,0:24:57.57:58,0,94	0/1:17,0:17:9.49:46,0,9	0/1:20,0:20:6.84:62,0,7	0/1:19,0:19:13.33:13,0,95	0/1:11,0:11:7.65:56,0,8	1/1:0,11:11:23.71:301,24,0	1/1:0,5:5:12.04:160,12,0	0/1:20,0:20:18.10:39,0,18	1/1:14,0:14:0.52:44,1,0	0/1:16,0:16:12.10:41,0,12	1/1:7,0:7:5.89:17,6,0
chr10	33584930	.	A	ATT	5521.01	PASS	AC=16;AF=0.296;AN=54;BaseQRankSum=-3.466;DP=604;FS=1.602;HRun=9;HaplotypeScore=82.1514;InbreedingCoeff=0.9939;MQ=76.67;MQ0=2;MQRankSum=-3.646;QD=28.91;ReadPosRankSum=-1.353;VQSLOD=4.8694;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	0/0:9,0:9:24.06:0,24,255	0/0:21,0:16:23.68:0,24,205	0/0:23,0:21:36.10:0,36,400	1/1:6,24:32:75.05:999,75,0	1/1:2,25:27:63.69:970,64,0	1/1:3,17:22:59.13:823,59,0	0/0:30,0:30:56.99:0,57,635	1/1:1,20:21:50.66:748,51,0	0/0:29,0:29:81.19:0,81,856	0/0:31,0:31:78.14:0,78,830	1/1:6,0:19:39.05:369,39,0	0/0:24,0:24:63.12:0,63,662	0/0:15,0:15:39.09:0,39,415	0/0:21,0:21:60.13:0,60,631	0/0:18,0:18:48.11:0,48,511	1/1:3,29:31:60.20:906,60,0	0/0:24,0:24:37.75:0,38,582	0/0:20,0:20:57.13:0,57,601	0/0:32,0:32:79.38:0,79,824	0/0:10,0:10:30.08:0,30,319	0/0:21,0:21:50.15:0,50,517	1/1:3,0:20:42.01:390,42,0	1/1:2,1:16:33.05:316,33,0	0/0:26,0:26:66.14:0,66,702	0/0:25,0:25:66.11:0,66,689	0/0:30,0:29:84.02:0,84,867	0/0:4,0:4:12.03:0,12,127
chr10	33585161	.	T	TA	9054.34	PASS	AC=32;AF=0.593;AN=54;BaseQRankSum=-15.155;DP=640;FS=9.250;HRun=9;HaplotypeScore=74.3724;InbreedingCoeff=0.9969;MQ=82.64;MQ0=0;MQRankSum=0.187;QD=25.94;ReadPosRankSum=0.175;VQSLOD=5.0771;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	1/1:2,6:8:18.05:199,18,0	0/0:25,0:25:46.17:0,46,443	0/0:25,0:27:44.65:0,45,535	0/0:26,0:26:65.90:0,66,558	0/0:23,0:23:53.98:0,54,468	0/0:24,0:24:62.96:0,63,541	1/1:6,30:36:88.40:940,88,0	0/0:27,0:27:59.97:0,60,521	1/1:2,19:22:57.10:607,57,0	1/1:0,34:35:90.04:963,90,0	0/0:4,0:27:49.52:0,50,148	1/1:1,18:19:42.11:465,42,0	1/1:8,22:30:66.18:729,66,0	0/0:32,0:32:92.96:0,93,801	1/1:2,8:10:21.06:232,21,0	0/0:35,0:35:99:0,102,875	1/1:1,16:18:47.91:497,48,0	1/1:1,15:16:45.10:486,45,0	1/1:5,28:33:58.06:831,58,0	1/1:3,24:27:37.13:638,37,0	1/1:2,16:19:47.96:512,48,0	0/0:2,0:23:30.70:0,31,111	0/0:4,0:22:35.10:0,35,102	1/1:2,12:14:39.10:425,39,0	1/1:2,24:26:72.18:786,72,0	1/1:5,22:27:35.11:545,35,0	1/1:3,6:9:18.05:199,18,0
chr10	33585229	.	AG	A	2337.03	PASS	AC=6;AF=0.111;AN=54;BaseQRankSum=8.518;DP=625;FS=11.288;HRun=3;HaplotypeScore=71.8042;InbreedingCoeff=0.9955;MQ=92.95;MQ0=0;MQRankSum=-4.756;QD=31.16;ReadPosRankSum=1.404;VQSLOD=3.1193;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	0/0:6,0:6:18.06:0,18,258	0/0:34,0:34:96.07:0,96,1247	0/0:26,0:26:72.08:0,72,921	0/0:22,0:22:66.21:0,66,932	0/0:32,0:32:96.31:0,96,1365	0/0:15,0:15:45.15:0,45,646	0/0:28,0:28:75.21:0,75,1012	0/0:28,0:28:81.24:0,81,1140	0/0:19,0:19:57.18:0,57,803	0/0:34,0:34:99:0,99,1405	1/1:1,26:27:81.13:954,81,0	0/0:23,0:23:66.17:0,66,909	0/0:25,0:25:72.24:0,72,1025	0/0:21,0:21:63.18:0,63,870	0/0:17,0:17:48.16:0,48,691	0/0:28,0:28:81.27:0,81,1160	0/0:12,0:12:30.08:0,30,412	0/0:28,0:28:81.25:0,81,1129	0/0:23,0:23:66.22:0,66,949	0/0:23,0:23:60.19:0,60,845	0/0:20,0:20:60.19:0,60,845	1/1:2,24:26:75.11:875,75,0	1/1:0,22:22:54.05:650,54,0	0/0:20,0:20:60.20:0,60,860	0/0:27,0:27:81.27:0,81,1166	0/0:32,0:32:90.30:0,90,1294	0/0:7,0:7:21.07:0,21,302
chr10	33586020	.	GA	G	1089.26	PASS	AB=0.953;AC=11;AF=0.212;AN=52;BaseQRankSum=3.554;DP=517;FS=2.837;HRun=1;HaplotypeScore=191.2157;InbreedingCoeff=0.0823;MQ=40.06;MQ0=23;MQRankSum=2.362;QD=5.89;ReadPosRankSum=0.837;VQSLOD=0.5455;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:1,0:1:0:0,0,0	0/0:5,0:5:9.01:0,9,90	./.	./.	0/1:36,1:37:99:182,0,220	0/1:36,0:35:99:339,0,338	0/1:15,0:15:35.09:35,0,66	0/0:36,0:25:75.25:0,75,1075	0/1:22,0:17:99:143,0,218	0/0:16,0:15:42.78:0,43,411	1/1:10,6:16:2.93:42,3,0	0/1:17,0:17:56.28:63,0,56	0/1:12,9:21:12.13:337,0,12	0/0:20,0:20:7.70:0,8,79	0/0:19,0:19:7.47:0,7,352	0/0:25,0:22:51.36:0,51,665	0/0:25,0:23:58.97:0,59,782	0/0:14,0:13:37.28:0,37,504	0/0:14,0:11:33.06:0,33,455	0/0:21,0:21:18.05:0,18,255	0/0:11,0:11:15.52:0,16,237	0/0:21,0:21:3.01:0,3,46	1/1:13,0:13:5.81:76,6,0	0/1:8,0:8:12.67:13,0,42	0/0:21,1:22:13.73:0,14,59	0/0:20,0:20:56.55:0,57,677	0/0:24,0:24:44.07:0,44,677	0/0:6,0:6:15.03:0,15,174
chr10	33586023	.	AGATAGATGGTAGGTAGGTAGGTAGGTAGGTAG	A	9365.40	PASS	AB=0.978;AC=26;AF=0.542;AN=48;BaseQRankSum=-6.344;DP=517;FS=8.543;HRun=0;HaplotypeScore=360.9779;InbreedingCoeff=-0.1759;MQ=39.48;MQ0=21;MQRankSum=-9.651;QD=24.78;ReadPosRankSum=-2.437;VQSLOD=1.9251;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/1:5,0:5:58.99:82,0,59	./.	./.	0/1:19,0:35:5.67:6,0,1845	0/0:35,0:34:87.99:0,88,4323	0/0:15,0:15:39.06:0,39,1199	1/1:34,0:25:74.33:519,74,0	0/0:22,0:17:50.02:0,50,2354	0/1:17,0:16:99:734,0,118	1/1:17,0:17:2.97:20,3,0	0/1:16,0:16:99:139,0,145	1/1:20,0:20:30.10:735,30,0	1/1:20,0:20:9.03:183,9,0	1/1:19,0:19:32.35:1382,32,0	0/1:25,0:22:99:582,0,545	0/1:25,0:23:18.95:19,0,3506	0/1:14,0:13:99:584,0,187	0/1:14,0:11:99:125,0,262	0/1:21,0:21:8.92:9,0,161	0/0:12,0:12:18.91:0,19,440	./.	0/1:13,0:13:12.52:27,0,13	0/1:8,0:8:31.06:31,0,42	1/1:25,0:25:21.07:522,21,0	0/1:20,0:20:99:1883,0,255	0/1:24,0:24:99:1412,0,374	0/1:6,0:6:53.64:372,0,54
chr10	33586024	.	GA	G	1008.57	PASS	AB=0.906;AC=11;AF=0.212;AN=52;BaseQRankSum=2.020;DP=511;FS=0.610;HRun=1;HaplotypeScore=190.7332;InbreedingCoeff=0.1164;MQ=39.38;MQ0=21;MQRankSum=3.231;QD=4.54;ReadPosRankSum=1.282;VQSLOD=0.1456;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:1,0:1:0:0,0,0	0/0:5,0:5:9.01:0,9,90	./.	./.	0/1:25,6:31:23.67:244,0,24	0/1:29,6:34:99:358,0,248	0/1:11,4:15:21.83:43,0,22	0/0:34,0:25:73.97:0,74,984	0/1:19,3:17:99:155,0,137	0/0:17,0:16:46.78:0,47,447	0/0:17,0:17:2.28:0,2,11	0/0:16,0:16:11.63:0,12,93	0/1:20,0:20:15.48:61,0,15	0/1:16,4:20:29.97:60,0,30	0/0:19,0:19:36.07:0,36,373	0/0:26,0:23:45.61:0,46,577	0/1:24,1:23:0.28:0,0,238	0/0:14,0:13:33.58:0,34,467	0/0:14,0:11:30.99:0,31,451	0/0:21,0:21:9.03:0,9,140	0/0:12,0:12:15.52:0,16,237	0/1:19,0:19:0:0,0,0	0/1:11,0:11:0.21:0,0,0	0/0:8,0:8:5.38:0,5,55	1/1:17,7:24:21.03:219,21,0	0/0:20,1:21:34.11:0,34,628	0/0:24,0:24:48.14:0,48,641	0/0:6,0:6:15.02:0,15,156
chr10	33586027	.	AGAT	A	3714.91	PASS	AB=0.961;AC=28;AF=0.538;AN=52;BaseQRankSum=9.110;DP=507;FS=0.000;HRun=0;HaplotypeScore=191.9447;InbreedingCoeff=0.0625;MQ=39.60;MQ0=19;MQRankSum=3.187;QD=9.48;ReadPosRankSum=0.141;VQSLOD=2.7891;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:1,0:1:0:0,0,0	0/1:5,0:5:0.89:5,0,1	./.	./.	0/1:30,1:31:0.21:257,0,0	1/1:34,0:33:58.01:636,58,0	1/1:16,0:16:11.88:125,12,0	0/0:32,0:25:73.53:0,74,449	1/1:22,1:18:10.95:325,11,0	0/1:17,0:16:6.32:192,0,6	0/1:12,4:16:0.06:0,0,0	0/1:16,0:16:6.67:48,0,7	1/1:12,8:20:30.10:469,30,0	0/1:17,3:20:7.91:53,0,8	0/1:14,4:18:18.98:343,0,19	0/1:25,0:22:54.89:95,0,55	0/1:23,1:22:4.19:132,0,4	0/1:13,0:12:99:124,0,137	0/0:13,0:11:29.81:0,30,225	0/0:5,0:22:9:0,9,96	0/0:12,0:12:11.97:0,12,158	0/1:19,0:19:0:0,0,0	0/1:13,0:13:0:0,0,0	1/1:8,0:8:2.88:18,3,0	1/1:16,7:23:18.06:234,18,0	0/1:20,1:21:80.72:355,0,81	0/1:23,0:23:99:235,0,120	0/1:6,0:6:5.16:68,0,5
chr10	33586029	.	ATGG	A	3119.36	PASS	AB=0.865;AC=25;AF=0.500;AN=50;BaseQRankSum=8.635;DP=504;FS=2.212;HRun=0;HaplotypeScore=190.7695;InbreedingCoeff=-0.2545;MQ=39.54;MQ0=20;MQRankSum=3.450;QD=8.21;ReadPosRankSum=-0.262;VQSLOD=3.3736;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:1,0:1:0:0,0,0	0/1:4,1:5:1.17:1,0,6	./.	./.	0/1:31,0:31:17.68:99,0,18	0/1:35,0:34:22.99:232,0,23	0/1:16,0:16:9.21:34,0,9	0/0:30,0:25:72.53:0,73,409	0/1:24,0:19:54.40:105,0,54	0/1:13,4:16:8.01:252,0,8	0/1:8,7:15:0.20:0,0,0	0/1:16,0:16:14.91:38,0,15	1/1:10,10:20:30.02:303,30,0	0/1:18,0:18:13.27:13,0,16	0/1:6,11:17:4.06:407,0,4	0/1:14,11:22:0.58:317,0,1	0/1:21,1:20:43.07:43,0,187	0/1:10,3:12:76.97:221,0,77	0/0:12,0:11:11.38:0,11,124	0/0:22,0:22:8.55:0,9,45	0/1:12,0:12:9.27:9,0,77	./.	0/1:13,0:13:0:0,0,0	1/1:8,0:8:2.55:23,3,0	1/1:8,14:22:17.69:112,18,0	0/1:10,11:21:48.66:536,0,49	0/1:10,13:23:25.98:408,0,26	0/1:4,2:6:6.67:101,0,7
chr10	33586030	.	TGGTAGGTAGGTAGGTAGGTA	T	4806.79	PASS	AB=1.000;AC=19;AF=0.528;AN=36;BaseQRankSum=3.453;DP=501;FS=2.380;HRun=0;HaplotypeScore=282.7399;InbreedingCoeff=0.6352;MQ=39.22;MQ0=20;MQRankSum=-6.945;QD=30.04;ReadPosRankSum=-0.788;VQSLOD=3.6366;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	1/1:5,0:5:3:27,3,0	./.	./.	0/0:25,0:31:31.83:0,32,1184	0/0:28,0:33:63.69:0,64,2982	0/0:11,0:16:39.57:0,40,989	./.	0/0:22,0:20:43.53:0,44,2010	1/1:16,0:15:12.04:469,12,0	./.	1/1:6,10:16:3.01:159,3,0	1/1:20,0:20:3.01:116,3,0	./.	1/1:17,0:17:21.07:787,21,0	1/1:19,0:22:15.17:376,15,0	0/0:22,0:20:39.33:0,39,2404	1/1:10,0:12:12.04:463,12,0	./.	./.	0/0:10,0:11:5.41:0,5,26	./.	0/0:6,7:13:0.47:0,0,1	0/0:6,2:8:0:0,0,0	./.	0/1:20,0:20:45.67:1229,0,46	1/1:22,0:22:24.08:945,24,0	1/1:6,0:6:6.02:236,6,0
chr10	33586054	.	AG	A	3591.92	PASS	AB=0.752;AC=26;AF=0.542;AN=48;BaseQRankSum=5.225;DP=500;FS=5.354;HRun=2;HaplotypeScore=164.9818;InbreedingCoeff=0.6669;MQ=50.38;MQ0=12;MQRankSum=-6.334;QD=16.11;ReadPosRankSum=1.739;VQSLOD=3.6587;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	1/1:0,3:3:6.02:77,6,0	0/0:49,0:12:36.05:0,36,471	0/1:42,1:16:43.14:43,0,363	0/0:29,0:28:47.51:0,48,606	0/0:31,0:30:75.24:0,75,1008	0/0:22,0:22:61.41:0,61,738	1/1:0,8:8:24.08:307,24,0	0/0:27,0:23:67.10:0,67,902	1/1:0,16:16:45.14:569,45,0	1/1:2,17:19:21.04:240,21,0	0/0:14,0:14:9.10:0,9,167	1/1:0,17:17:9.03:115,9,0	1/1:14,5:19:3.01:39,3,0	1/1:0,18:18:30.10:381,30,0	1/1:6,14:19:16.85:208,17,0	0/0:24,0:22:54.15:0,54,758	1/1:2,9:11:23.91:306,24,0	1/1:1,2:2:6.02:77,6,0	./.	0/0:1,8:9:2.77:0,3,20	./.	0/0:13,0:13:2.97:0,3,20	0/0:5,0:5:3.01:0,3,41	./.	0/1:2,18:20:11.09:622,0,11	1/1:0,21:21:33.11:419,33,0	1/1:0,5:5:15.05:187,15,0
chr10	33586866	.	GT	G	9916.80	PASS	AC=48;AF=0.889;AN=54;BaseQRankSum=0.975;DP=499;FS=1.649;HRun=10;HaplotypeScore=53.9785;InbreedingCoeff=0.9746;MQ=70.66;MQ0=0;MQRankSum=-3.185;QD=21.05;ReadPosRankSum=3.289;VQSLOD=5.7462;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	1/1:1,12:13:32.99:287,33,0	0/0:5,0:5:11.76:0,12,88	0/0:8,0:9:19.72:0,20,174	1/1:5,27:32:75.42:652,75,0	1/1:1,19:20:50.99:443,51,0	1/1:1,13:14:13.40:264,13,0	1/1:7,18:26:56.01:475,56,0	1/1:0,8:8:24:208,24,0	1/1:3,18:21:56.96:490,57,0	1/1:1,25:26:65.97:572,66,0	1/1:1,12:13:29.99:260,30,0	1/1:1,15:16:35.99:313,36,0	1/1:1,19:20:56.99:495,57,0	0/0:14,0:14:42.11:0,42,465	1/1:4,18:22:44.98:391,45,0	1/1:1,15:16:38.99:338,39,0	1/1:3,20:23:56.98:495,57,0	1/1:5,11:16:32.98:287,33,0	1/1:2,31:33:83.95:728,84,0	1/1:3,8:11:20.99:182,21,0	1/1:1,17:18:44.63:390,45,0	1/1:2,20:22:51.92:465,52,0	1/1:0,12:12:35.99:313,36,0	1/1:1,27:28:74.98:651,75,0	1/1:3,23:26:68.95:593,69,0	1/1:3,20:23:47.99:417,48,0	1/1:0,12:12:24:208,24,0
chr10	33587467	.	T	TAA	946.75	PASS	AC=6;AF=0.111;AN=54;BaseQRankSum=6.943;DP=404;FS=19.139;HRun=7;HaplotypeScore=56.8022;InbreedingCoeff=0.9522;MQ=71.18;MQ0=1;MQRankSum=-2.798;QD=37.87;ReadPosRankSum=-0.348;VQSLOD=2.0026;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	0/0:6,0:6:15.04:0,15,174	0/0:11,0:10:18.07:0,18,179	0/0:11,0:8:11.85:0,12,119	0/0:22,0:22:57.12:0,57,622	0/0:13,0:13:33.07:0,33,364	0/0:14,0:14:39.12:0,39,454	0/0:42,0:42:99:0,111,1254	0/0:12,0:12:33.10:0,33,384	0/0:17,0:17:51.13:0,51,576	0/0:20,0:20:57.14:0,57,643	1/1:2,8:10:24.08:394,24,0	0/0:12,0:12:36.11:0,36,419	0/0:15,0:15:36.08:0,36,401	0/0:1,0:10:19.21:0,19,84	0/0:14,0:14:39.11:0,39,454	0/0:23,0:23:63.15:0,63,721	0/0:15,0:15:42.10:0,42,477	0/0:14,0:14:39.10:0,39,437	0/0:20,0:20:60.18:0,60,699	0/0:8,0:8:24.07:0,24,279	0/0:6,0:6:18.05:0,18,210	1/1:0,11:11:33.11:541,33,0	1/1:0,4:4:9.03:148,9,0	0/0:18,0:18:45.12:0,45,524	0/0:21,0:21:45.12:0,45,524	0/0:17,0:17:51.14:0,51,584	0/0:18,0:18:48.13:0,48,548
chr10	33587641	.	CCTTTCTTTTTTTCTTTCTTT	C	7830.98	PASS	AB=0.905;AC=35;AF=0.648;AN=54;BaseQRankSum=-5.015;DP=389;FS=0.000;HRun=0;HaplotypeScore=158.3657;InbreedingCoeff=0.4248;MQ=61.92;MQ0=2;MQRankSum=0.301;QD=28.27;ReadPosRankSum=-0.557;VQSLOD=3.7211;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	1/1:4,0:4:2.94:18,3,0	0/0:13,0:10:14.19:0,14,124	0/0:11,0:9:23.75:0,24,382	0/1:19,0:19:5.93:6,0,592	0/0:16,0:16:18.06:0,18,570	0/0:18,0:18:12.04:0,12,383	1/1:20,0:19:44.92:431,45,0	0/0:16,0:16:18.06:0,18,572	1/1:2,11:13:27.75:424,28,0	1/1:5,14:19:17.80:454,18,0	0/1:12,0:11:62.99:63,0,286	1/1:1,13:14:6.02:327,6,0	1/1:6,18:24:21.07:1141,21,0	0/0:21,0:21:18.06:0,18,615	0/1:2,18:20:86.71:318,0,87	0/0:16,0:17:9.03:0,9,226	1/1:4,8:12:0.29:488,0,0	1/1:3,21:23:62.16:1206,62,0	1/1:0,4:4:3.01:163,3,0	1/1:1,13:14:3.01:127,3,0	1/1:3,0:3:2.92:17,3,0	0/1:3,0:3:10.97:11,0,62	0/1:10,0:10:55.88:56,0,287	1/1:0,5:5:12.04:653,12,0	1/1:2,19:20:48.71:948,49,0	1/1:1,24:25:14.68:816,15,0	1/1:2,9:11:3.01:163,3,0
chr10	33587642	.	CTTTCTTTT	C	6285.39	PASS	AB=1.000;AC=49;AF=0.907;AN=54;BaseQRankSum=2.630;DP=385;FS=16.392;HRun=0;HaplotypeScore=105.7106;InbreedingCoeff=0.4515;MQ=61.99;MQ0=3;MQRankSum=-3.681;QD=17.41;ReadPosRankSum=3.916;VQSLOD=2.6246;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	1/1:4,0:4:2.94:18,3,0	0/0:13,0:10:14.19:0,14,124	0/0:11,0:9:23.75:0,24,241	1/1:1,18:19:32.70:423,33,0	1/1:0,15:15:18.06:472,18,0	1/1:0,18:18:12.04:320,12,0	1/1:20,0:19:44.89:376,45,0	1/1:1,15:16:18.06:479,18,0	1/1:13,0:13:18.36:176,18,0	1/1:18,0:18:15.68:154,16,0	1/1:12,0:11:32.83:346,33,0	1/1:13,0:13:6.02:118,6,0	1/1:24,0:24:21.07:413,21,0	1/1:2,19:21:18.06:438,18,0	1/1:19,1:20:9.03:198,9,0	1/1:5,12:17:9.03:202,9,0	1/1:11,0:11:14.74:210,15,0	1/1:24,0:23:53.19:573,53,0	1/1:4,0:4:3.01:59,3,0	1/1:14,0:14:2.99:24,3,0	1/1:3,0:3:2.92:17,3,0	1/1:3,0:3:5.92:42,6,0	0/1:10,0:10:12.01:194,0,12	1/1:5,0:5:12.04:237,12,0	1/1:21,0:20:39.35:440,39,0	1/1:25,0:24:14.85:296,15,0	1/1:11,0:10:3.01:59,3,0
chr10	33587661	.	T	TTC	408.78	PASS	AB=0.952;AC=7;AF=0.135;AN=52;BaseQRankSum=-1.870;DP=362;FS=0.903;HRun=0;HaplotypeScore=101.0303;InbreedingCoeff=-0.0304;MQ=51.87;MQ0=7;MQRankSum=2.055;QD=4.09;ReadPosRankSum=-5.007;VQSLOD=0.7477;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	0/0:2,0:2:3.01:0,3,49	0/0:14,0:2:2.04:0,2,6	0/0:11,0:7:11.44:0,11,158	0/0:18,0:18:30.08:0,30,412	0/0:18,0:18:27.07:0,27,327	0/0:16,0:16:12.03:0,12,131	0/1:11,4:16:99:177,0,409	0/0:15,0:15:24.05:0,24,249	0/1:11,0:11:93.74:94,0,182	0/1:15,0:15:96.21:103,0,96	0/0:14,0:13:39.09:0,39,586	0/0:14,0:14:2.18:0,2,19	0/0:20,0:20:0.32:0,0,57	0/0:17,0:17:21.05:0,21,240	0/0:19,0:19:6.22:0,6,46	0/0:15,0:16:17.84:0,18,216	0/0:9,0:9:11.18:0,11,74	0/1:25,0:23:66.96:67,0,277	0/0:4,0:4:2.74:0,3,12	1/1:14,0:14:3.01:59,3,0	./.	0/0:1,0:1:3.01:0,3,48	0/0:12,0:12:24.07:0,24,349	0/0:6,0:5:5.76:0,6,18	0/1:19,0:18:28.83:29,0,273	0/0:25,0:24:13.51:0,14,62	0/0:11,0:9:2.80:0,3,13
chr10	33587683	.	TTTC	T	279.47	PASS	AB=1.000;AC=8;AF=0.167;AN=48;BaseQRankSum=7.322;DP=372;FS=3.271;HRun=0;HaplotypeScore=122.7924;InbreedingCoeff=0.4138;MQ=59.97;MQ0=8;MQRankSum=-5.031;QD=3.29;ReadPosRankSum=3.866;VQSLOD=2.3622;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/1:35,0:10:15.03:15,0,72	0/1:26,0:11:4.82:5,0,6	0/0:10,0:10:10.89:0,11,105	0/0:18,0:18:23.51:0,24,246	0/0:17,0:17:20.56:0,21,281	0/0:12,0:12:36.07:0,36,367	0/0:15,0:15:6.68:0,7,206	0/0:11,0:11:11.33:0,11,128	0/0:12,0:12:11.03:0,11,139	1/1:11,0:10:27.18:320,27,0	0/0:13,0:13:10.34:0,10,124	0/0:24,0:24:13.27:0,13,269	0/0:19,0:19:11.36:0,11,185	0/0:18,0:18:4.35:0,4,62	0/0:13,0:13:16.65:0,17,192	0/0:10,0:10:8.66:0,9,96	0/0:23,0:22:27.91:0,28,318	0/0:6,0:6:5.15:0,5,63	0/0:16,0:16:15.03:0,15,159	./.	./.	1/1:4,5:9:2.23:54,2,0	0/0:8,0:7:2.96:0,3,59	0/0:19,0:18:25.01:0,25,288	0/0:23,0:22:9.56:0,10,122	1/1:4,0:3:0.47:1,0,0
chr10	33587686	.	C	CT	297.58	PASS	AB=0.987;AC=6;AF=0.125;AN=48;BaseQRankSum=1.492;DP=378;FS=1.004;HRun=5;HaplotypeScore=115.0849;InbreedingCoeff=0.5587;MQ=60.77;MQ0=9;MQRankSum=0.301;QD=3.46;ReadPosRankSum=0.577;VQSLOD=-0.4375;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/1:37,0:12:16.25:16,0,71	0/1:28,0:12:4.12:8,0,4	0/0:10,0:10:18.03:0,18,179	0/0:19,0:19:42.03:0,42,412	0/0:17,0:17:42.02:0,42,420	0/0:15,0:15:45.10:0,45,468	0/0:15,0:15:38.88:0,39,367	0/0:10,0:10:15.03:0,15,156	0/0:12,0:12:15.03:0,15,152	1/1:3,8:10:30.09:372,30,0	0/0:14,0:14:21.02:0,21,204	0/0:23,0:23:45.01:0,45,432	0/0:18,0:19:32.99:0,33,320	0/0:16,0:16:18.02:0,18,176	0/0:14,0:14:20.96:0,21,216	0/0:11,0:11:21.02:0,21,201	0/0:21,0:20:45.08:0,45,457	0/0:6,0:6:9.01:0,9,90	0/0:16,0:16:15.04:0,15,161	./.	./.	1/1:8,1:9:4.94:22,5,0	0/0:8,0:7:18.01:0,18,169	0/0:21,0:20:42.08:0,42,430	0/0:21,0:20:27.03:0,27,259	0/0:4,0:3:3:0,3,27
chr10	33588022	.	CCTT	C	2084.50	PASS	AB=0.500;AC=35;AF=0.700;AN=50;BaseQRankSum=-0.302;DP=177;FS=10.584;HRun=0;HaplotypeScore=36.2389;InbreedingCoeff=0.6303;MQ=74.43;MQ0=5;MQRankSum=-2.149;QD=24.24;ReadPosRankSum=3.420;VQSLOD=1.7499;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:31,0:14:28.49:0,28,577	0/0:33,0:17:30.10:0,30,571	0/1:0,0:7:9.85:10,0,14	1/1:0,0:5:2.98:21,3,0	1/1:1,0:7:8.78:53,9,0	1/1:2,6:7:15.05:217,15,0	1/1:0,0:5:2.98:21,3,0	1/1:0,8:8:24.07:337,24,0	1/1:0,2:2:6.02:72,6,0	0/0:2,0:2:6.02:0,6,105	1/1:0,4:4:9.03:134,9,0	1/1:0,4:4:9.03:119,9,0	0/0:5,0:5:15.05:0,15,303	1/1:1,3:4:12.02:158,12,0	0/0:3,0:3:3.01:0,3,43	1/1:0,2:2:6.02:89,6,0	1/1:0,5:5:15.01:181,15,0	1/1:0,1:1:3.01:45,3,0	1/1:0,2:2:3.01:45,3,0	1/1:0,6:6:12.04:171,12,0	0/0:7,0:7:21.04:0,21,393	0/0:7,0:7:12.04:0,12,196	1/1:0,2:2:3.01:45,3,0	1/1:0,8:8:24.08:359,24,0	1/1:0,6:6:12.04:179,12,0	./.
chr10	33588217	.	TC	T	1531.70	PASS	AC=6;AF=0.111;AN=54;BaseQRankSum=9.995;DP=491;FS=3.771;HRun=3;HaplotypeScore=85.2078;InbreedingCoeff=0.9195;MQ=90.18;MQ0=0;MQRankSum=-2.176;QD=31.91;ReadPosRankSum=1.820;VQSLOD=4.0322;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	0/0:3,0:3:9.03:0,9,129	0/0:20,0:20:53.97:0,54,737	0/0:21,1:22:44.08:0,44,529	0/0:14,0:14:42.14:0,42,605	0/0:18,0:18:51.17:0,51,734	0/0:27,0:27:78.22:0,78,1098	0/0:24,0:24:66.21:0,66,930	0/0:20,0:20:54.18:0,54,777	0/0:15,0:15:39.13:0,39,561	0/0:11,0:11:30.10:0,30,432	1/1:0,13:13:39.12:483,39,0	0/0:23,0:23:69.23:0,69,992	0/0:32,0:32:93.30:0,93,1305	0/0:29,0:28:84.26:0,84,1172	0/0:13,0:13:39.13:0,39,562	0/0:17,0:17:51.13:0,51,693	0/0:10,0:10:27.05:0,27,365	0/0:23,0:23:63.20:0,63,889	0/0:15,0:15:45.15:0,45,648	0/0:42,0:42:99:0,123,1747	0/0:13,0:13:39.13:0,39,560	1/1:0,9:9:21.07:260,21,0	1/1:1,25:26:75.24:929,75,0	0/0:10,0:10:30.10:0,30,432	0/0:18,0:18:54.18:0,54,777	0/0:23,0:23:69.23:0,69,992	0/0:1,0:1:3.01:0,3,43
chr10	33588855	.	TTAA	T	1417.88	PASS	AC=6;AF=0.120;AN=50;BaseQRankSum=7.841;DP=589;FS=7.578;HRun=0;HaplotypeScore=73.4439;InbreedingCoeff=0.9918;MQ=53.34;MQ0=28;MQRankSum=-2.387;QD=24.88;ReadPosRankSum=-0.663;VQSLOD=2.3987;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/0:8,0:8:21.07:0,21,495	./.	./.	0/0:36,0:36:84.25:0,84,2013	0/0:28,0:28:72.24:0,72,1702	0/0:20,0:15:33.04:0,33,685	0/0:29,0:7:21.06:0,21,466	0/0:21,0:21:60.21:0,60,1445	0/0:19,0:19:57.20:0,57,1391	0/0:32,0:31:93.31:0,93,2208	1/1:0,15:13:18.06:334,18,0	0/0:27,0:27:69.23:0,69,1649	0/0:16,0:16:42.14:0,42,988	0/0:20,0:20:51.18:0,51,1257	0/0:20,0:20:57.19:0,57,1359	0/0:26,0:26:60.21:0,60,1477	0/0:22,0:22:51.16:0,51,1202	0/0:18,0:12:36.10:0,36,791	0/0:34,0:34:99:0,102,2408	0/0:22,0:21:57.20:0,57,1401	0/0:26,0:26:54.19:0,54,1329	1/1:0,24:22:42.10:778,42,0	1/1:0,18:18:24.08:444,24,0	0/0:20,0:20:54.18:0,54,1275	0/0:16,0:15:45.15:0,45,1078	0/0:35,0:35:99:0,102,2356	0/0:7,0:7:21.07:0,21,482
chr10	33589102	.	AC	A	1487.74	PASS	AC=6;AF=0.111;AN=54;BaseQRankSum=5.195;DP=585;FS=3.753;HRun=2;HaplotypeScore=73.3414;InbreedingCoeff=0.9982;MQ=58.16;MQ0=18;MQRankSum=-1.625;QD=25.65;ReadPosRankSum=0.709;VQSLOD=3.4305;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	0/0:11,0:11:24.02:0,24,306	0/0:27,0:14:39.04:0,39,561	0/0:39,0:19:48.12:0,48,650	0/0:35,0:35:87.14:0,87,1231	0/0:16,0:16:45.15:0,45,672	0/0:9,0:8:24.08:0,24,358	0/0:33,0:29:84.26:0,84,1239	0/0:13,0:13:39.10:0,39,543	0/0:26,0:26:75.22:0,75,1100	0/0:26,0:26:60.20:0,60,894	1/1:0,23:23:60.13:756,60,0	0/0:20,0:19:54:0,54,784	0/0:18,0:18:44.98:0,45,634	0/0:19,0:19:51.17:0,51,763	0/0:17,0:17:48.14:0,48,682	0/0:22,0:22:57.19:0,57,853	0/0:19,0:18:48.08:0,48,669	0/0:20,0:16:48.14:0,48,682	0/0:28,0:28:69.04:0,69,936	0/0:30,0:30:90.25:0,90,1320	0/0:23,0:23:51.09:0,51,726	1/1:1,18:17:30.03:368,30,0	1/1:1,15:16:39.13:506,39,0	0/0:26,0:26:72.20:0,72,1050	0/0:18,0:18:54.15:0,54,751	0/0:20,0:20:51.15:0,51,724	0/0:12,0:12:36.09:0,36,497
chr10	33590453	.	C	CA	4286.24	PASS	AC=16;AF=0.296;AN=54;BaseQRankSum=14.420;DP=514;FS=12.329;HRun=8;HaplotypeScore=76.9673;InbreedingCoeff=0.9850;MQ=72.40;MQ0=0;MQRankSum=-3.220;QD=29.16;ReadPosRankSum=1.989;VQSLOD=4.3359;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	0/0:3,0:3:9:0,9,82	0/0:17,0:18:16.32:0,16,252	0/0:10,0:11:14.96:0,15,131	1/1:7,19:26:66.19:756,66,0	1/1:4,16:20:51.15:588,51,0	1/1:1,11:12:36.11:415,36,0	0/0:21,0:21:44.68:0,45,411	1/1:4,9:14:35.94:395,36,0	0/0:25,0:25:51.37:0,51,513	0/0:24,0:24:69.02:0,69,627	1/1:2,12:14:39.12:450,39,0	0/0:18,0:18:45.02:0,45,411	0/0:17,0:17:45.02:0,45,412	0/0:23,0:23:63:0,63,566	0/0:16,0:16:44.97:0,45,404	1/1:5,15:20:45.13:519,45,0	0/0:14,0:14:36.01:0,36,329	0/0:23,0:23:57.02:0,57,521	0/0:25,1:26:60.02:0,60,549	0/0:15,0:15:32.99:0,33,302	0/0:21,0:21:56.65:0,57,521	1/1:4,16:20:29.68:579,30,0	1/1:7,14:21:51.15:584,51,0	0/0:22,0:22:63.02:0,63,573	0/0:27,0:27:72:0,72,648	0/0:33,0:32:78.04:0,78,714	0/0:10,0:10:27.01:0,27,247
chr10	33590502	.	AG	A	4191.31	PASS	AC=18;AF=0.333;AN=54;BaseQRankSum=10.964;DP=495;FS=3.904;HRun=8;HaplotypeScore=68.9439;InbreedingCoeff=0.9712;MQ=80.12;MQ0=1;MQRankSum=-4.859;QD=23.16;ReadPosRankSum=1.851;VQSLOD=4.4469;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/0:3,0:3:3.01:0,3,36	0/0:20,0:19:35.31:0,35,395	0/0:21,0:19:33:0,33,360	1/1:3,25:28:63.10:608,63,0	1/1:3,25:28:75.11:723,75,0	1/1:0,14:14:39.06:377,39,0	0/0:11,0:11:21.06:0,21,250	1/1:0,17:17:51.08:492,51,0	0/0:19,0:19:45.13:0,45,534	0/0:21,0:21:57.15:0,57,662	1/1:2,13:15:42.05:399,42,0	0/0:20,0:20:54.11:0,54,613	0/0:18,0:18:54.16:0,54,640	1/1:1,20:21:54.09:521,54,0	0/0:20,0:20:60.18:0,60,724	1/1:3,18:21:39.06:376,39,0	0/0:13,0:13:36.09:0,36,414	0/0:17,0:17:36.07:0,36,417	0/0:19,0:19:54.09:0,54,619	0/0:16,0:16:45.14:0,45,543	0/0:19,0:19:54.15:0,54,640	1/1:3,18:21:45.07:434,45,0	1/1:5,11:16:27.04:261,27,0	0/0:21,0:22:54.03:0,54,630	0/0:24,0:24:66.17:0,66,766	0/0:23,0:22:63.19:0,63,760	0/0:8,0:8:24.07:0,24,287
chr10	33591949	.	CTGTGTGTG	C	93.57	PASS	AC=6;AF=0.188;AN=32;BaseQRankSum=3.172;DP=519;FS=13.103;HRun=0;HaplotypeScore=121.5669;InbreedingCoeff=0.4268;MQ=66.71;MQ0=19;MQRankSum=-2.675;QD=1.61;ReadPosRankSum=0.193;VQSLOD=1.6290;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	0/0:23,0:23:15.05:0,15,510	0/0:26,0:26:8.69:0,9,189	0/0:28,0:26:0.47:0,0,1	0/0:26,0:26:0.89:0,1,2	0/0:23,0:22:18.06:0,18,432	./.	0/0:14,0:14:0:0,0,0	1/1:20,0:21:3.01:56,3,0	./.	./.	1/1:9,0:11:3.01:55,3,0	1/1:20,5:24:3.01:73,3,0	0/0:24,0:21:30.09:0,30,774	0/0:12,0:12:3:0,3,25	./.	./.	0/0:37,0:37:2.01:0,2,23	./.	./.	0/0:24,0:23:3.01:0,3,42	./.	0/0:26,0:25:0.47:0,0,1	0/0:12,0:12:0:0,0,0	0/0:5,0:5:2.04:0,2,6
chr10	33592794	.	CT	C	364.60	PASS	AC=2;AF=0.037;AN=54;BaseQRankSum=3.836;DP=636;FS=2.103;HRun=7;HaplotypeScore=72.8572;InbreedingCoeff=0.9997;MQ=84.73;MQ0=0;MQRankSum=-3.258;QD=21.45;ReadPosRankSum=0.343;VQSLOD=3.2249;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/0:13,0:13:36.12:0,36,453	0/0:29,0:29:66.21:0,66,821	0/0:35,0:34:80.55:0,81,880	0/0:30,0:30:87.27:0,87,1081	0/0:29,0:29:75.24:0,75,942	0/0:19,0:19:51.12:0,51,612	0/0:24,0:24:69.20:0,69,837	0/0:32,0:32:93.27:0,93,1143	0/0:26,0:26:72.23:0,72,906	0/0:18,0:18:48.14:0,48,592	0/0:21,0:21:60.18:0,60,743	0/0:23,0:23:54.16:0,54,665	0/0:12,0:12:36.12:0,36,453	1/1:2,15:17:45.10:459,45,0	0/0:23,0:23:66.21:0,66,830	0/0:29,0:29:84.26:0,84,1044	0/0:19,0:19:54.17:0,54,679	0/0:28,0:28:66.12:0,66,750	0/0:29,0:29:81.25:0,81,1006	0/0:23,0:23:66.21:0,66,830	0/0:22,0:22:63.19:0,63,780	0/0:23,0:24:69.15:0,69,821	0/0:18,0:18:54.13:0,54,661	0/0:19,0:19:57.18:0,57,717	0/0:26,0:26:75.23:0,75,932	0/0:30,1:31:47.65:0,48,912	0/0:17,0:17:42.13:0,42,528
chr10	33593006	.	TA	T	3793.86	PASS	AC=12;AF=0.222;AN=54;BaseQRankSum=15.218;DP=499;FS=5.149;HRun=7;HaplotypeScore=57.8188;InbreedingCoeff=0.9971;MQ=77.07;MQ0=0;MQRankSum=-1.100;QD=25.46;ReadPosRankSum=3.326;VQSLOD=4.3188;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	0/0:9,0:9:24.08:0,24,302	0/0:12,0:11:20.85:0,21,231	0/0:9,0:9:21.07:0,21,259	1/1:1,18:19:48.10:489,48,0	1/1:3,17:20:48.11:490,48,0	1/1:1,23:24:66.15:673,66,0	0/0:28,0:28:81.26:0,81,1018	1/1:7,24:31:69.15:703,69,0	0/0:23,0:23:66.21:0,66,822	0/0:14,0:14:42.13:0,42,517	0/0:20,0:20:57.14:0,57,699	0/0:20,0:20:51.16:0,51,642	0/0:15,0:15:42.13:0,42,527	1/1:0,19:19:48.11:490,48,0	0/0:14,0:14:39.10:0,39,455	1/1:3,33:36:93.21:949,93,0	0/0:17,0:17:48.14:0,48,588	0/0:20,0:20:54.17:0,54,679	0/0:15,0:15:45.14:0,45,566	0/0:13,0:13:39.12:0,39,491	0/0:11,0:11:30.10:0,30,377	0/0:15,0:15:36.12:0,36,452	0/0:28,0:28:81.26:0,81,1018	0/0:9,0:9:27.07:0,27,325	0/0:25,0:25:66.20:0,66,809	0/0:25,0:24:66.19:0,66,804	0/0:8,0:8:24.08:0,24,302
chr10	33593243	.	GATATATATATACATATATATATAT	G	1496.04	PASS	AB=1.000;AC=9;AF=0.225;AN=40;BaseQRankSum=0.523;DP=143;FS=3.459;HRun=0;HaplotypeScore=98.5151;InbreedingCoeff=0.3661;MQ=101.79;MQ0=3;MQRankSum=-2.398;QD=45.33;ReadPosRankSum=2.102;VQSLOD=2.1741;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/0:1,0:1:3.01:0,3,115	0/0:17,0:15:19.88:0,20,408	0/0:13,0:8:9.49:0,9,289	./.	0/0:7,0:9:18.06:0,18,982	1/1:4,0:4:0.47:1,0,0	0/0:6,0:6:8.44:0,8,540	0/0:4,0:5:6:0,6,306	0/1:5,0:5:20.45:20,0,99	./.	0/0:3,0:3:3.48:0,3,43	0/0:2,0:2:2.94:0,3,22	./.	1/1:7,11:18:24.08:1535,24,0	./.	0/0:9,0:12:8.94:0,9,202	0/0:6,0:6:9.50:0,10,773	0/0:6,0:5:3.01:0,3,66	0/0:3,0:3:2.96:0,3,67	./.	1/1:2,0:2:3:26,3,0	./.	0/0:2,0:2:0.47:0,0,1	0/0:2,0:2:3.01:0,3,66	1/1:4,0:4:3:27,3,0	0/0:7,0:7:9.03:0,9,301	./.
chr10	33593267	.	T	TATAC	390.48	PASS	AB=1.000;AC=13;AF=0.325;AN=40;BaseQRankSum=-0.791;DP=106;FS=4.775;HRun=0;HaplotypeScore=42.3064;InbreedingCoeff=0.4524;MQ=79.36;MQ0=5;MQRankSum=0.905;QD=8.14;ReadPosRankSum=0.105;VQSLOD=1.4660;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	./.	1/1:6,0:4:2.92:8,3,0	0/0:13,0:6:4.76:0,5,18	1/1:4,1:5:5.99:48,6,0	1/1:5,2:7:14.99:227,15,0	1/1:5,0:5:9:96,9,0	0/0:7,0:7:17.78:0,18,139	1/1:1,1:2:6:103,6,0	./.	0/0:2,0:2:3:0,3,26	0/0:1,0:1:2.99:0,3,24	./.	0/0:2,0:2:3:0,3,25	0/0:18,0:17:29.63:0,30,261	0/0:2,0:2:5.99:0,6,50	1/1:3,13:18:3.86:23,4,0	0/1:5,0:5:19.18:19,0,48	0/0:2,0:1:3:0,3,28	./.	./.	0/0:3,0:3:8.99:0,9,75	0/0:2,0:2:5.99:0,6,50	0/0:2,0:2:3.46:0,3,24	0/0:1,0:1:3:0,3,26	./.	0/0:2,0:2:5.99:0,6,50	./.
chr10	33594120	.	AATCATCATG	A	2083.63	PASS	AC=2;AF=0.037;AN=54;BaseQRankSum=7.947;DP=661;FS=12.329;HRun=0;HaplotypeScore=180.2086;InbreedingCoeff=0.9815;MQ=72.17;MQ0=7;MQRankSum=-7.979;QD=80.14;ReadPosRankSum=2.138;VQSLOD=3.3272;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	0/0:8,0:8:24.08:0,24,1191	0/0:25,0:22:66.23:0,66,3022	0/0:21,0:18:54.19:0,54,2507	0/0:30,0:30:78.27:0,78,3628	0/0:36,0:36:99:0,102,4755	0/0:21,0:21:54.19:0,54,2680	0/0:38,0:38:99:0,114,5176	0/0:29,0:29:81.28:0,81,3912	0/0:33,0:33:99:0,99,4497	0/0:23,0:23:63.22:0,63,3073	0/0:22,0:22:60.21:0,60,2978	0/0:24,0:24:69.24:0,69,3381	0/0:15,0:15:45.15:0,45,2188	1/1:0,26:25:69.24:2178,69,0	0/0:24,0:24:69.22:0,69,3079	0/0:16,0:16:48.14:0,48,2219	0/0:9,0:9:27.09:0,27,1338	0/0:24,0:24:69.24:0,69,3234	0/0:32,0:32:87.26:0,87,3985	0/0:32,0:31:93.32:0,93,4494	0/0:33,0:33:99:0,99,4701	0/0:22,0:22:63.22:0,63,3039	0/0:18,0:18:51.18:0,51,2479	0/0:28,0:28:81.28:0,81,3746	0/0:34,0:34:96.24:0,96,4492	0/0:33,0:33:96.31:0,96,4506	0/0:5,0:5:15.05:0,15,744
chr10	33594386	.	AT	A	670.72	PASS	AC=2;AF=0.037;AN=54;BaseQRankSum=7.369;DP=619;FS=0.000;HRun=7;HaplotypeScore=58.3571;InbreedingCoeff=0.9423;MQ=79.33;MQ0=0;MQRankSum=-3.735;QD=24.84;ReadPosRankSum=1.063;VQSLOD=3.8624;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	0/0:10,0:10:27.09:0,27,340	0/0:17,0:17:45.14:0,45,543	0/0:12,0:12:27.05:0,27,305	0/0:33,0:33:96.30:0,96,1198	0/0:23,0:23:66.19:0,66,816	0/0:18,0:18:54.17:0,54,679	0/0:40,0:40:99:0,105,1299	0/0:22,0:22:63.20:0,63,792	0/0:36,0:36:99:0,105,1321	0/0:21,0:21:57.17:0,57,706	0/0:17,0:17:51.15:0,51,629	0/0:24,0:24:69.22:0,69,868	0/0:25,0:25:69.21:0,69,857	1/1:1,26:27:75.17:765,75,0	0/0:26,0:26:69.22:0,69,868	0/0:23,0:23:63.20:0,63,791	0/0:9,0:9:27.09:0,27,340	0/0:22,0:22:63.16:0,63,763	0/0:22,0:22:60.19:0,60,755	0/0:12,0:12:36.12:0,36,453	0/0:28,0:28:84.26:0,84,1046	0/0:29,0:29:84.26:0,84,1044	0/0:28,0:27:81.24:0,81,1005	0/0:39,0:39:99:0,111,1385	0/0:26,0:26:69.22:0,69,868	0/0:26,0:26:75.21:0,75,928	0/0:4,0:4:9.03:0,9,113
chr10	33595086	.	G	GA	7313.99	PASS	AB=0.756;AC=47;AF=0.870;AN=54;BaseQRankSum=-7.856;DP=520;FS=2.737;HRun=11;HaplotypeScore=56.6850;InbreedingCoeff=0.0931;MQ=77.61;MQ0=1;MQRankSum=0.213;QD=14.69;ReadPosRankSum=2.101;VQSLOD=5.3658;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	0/1:2,3:6:11.38:63,0,11	0/1:26,0:18:17.07:17,0,64	0/1:28,0:19:14.21:14,0,61	1/1:3,29:34:71.26:647,71,0	1/1:7,15:22:36.07:365,36,0	1/1:3,13:16:9.83:281,10,0	0/1:9,15:24:15.56:403,0,16	1/1:4,14:18:26.88:253,27,0	1/1:6,13:19:12.29:275,12,0	1/1:4,16:20:27.22:414,27,0	1/1:4,9:12:24.05:243,24,0	1/1:5,11:17:0.65:174,1,0	0/1:4,14:18:36.50:211,0,37	0/0:2,0:22:32.59:0,33,94	1/1:2,12:14:30.06:305,30,0	1/1:2,18:20:21.86:403,22,0	1/1:4,12:16:6.82:250,7,0	1/1:6,23:29:39.84:570,40,0	1/1:5,21:26:28.02:450,28,0	1/1:0,5:6:8.85:75,9,0	1/1:2,10:12:3.82:218,4,0	1/1:3,12:17:32.74:303,33,0	1/1:2,7:10:14.95:139,15,0	1/1:4,12:17:12.45:266,12,0	1/1:9,20:30:21.98:566,22,0	1/1:10,18:28:3.42:349,3,0	1/1:2,6:8:6.01:61,6,0
chr10	33595467	.	G	GT	449.13	PASS	AC=2;AF=0.037;AN=54;BaseQRankSum=-5.383;DP=527;FS=5.284;HRun=7;HaplotypeScore=54.7295;InbreedingCoeff=0.9878;MQ=79.51;MQ0=1;MQRankSum=-1.723;QD=29.94;ReadPosRankSum=0.208;VQSLOD=4.0477;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	0/0:14,0:14:33.05:0,33,318	0/0:13,0:12:26.97:0,27,242	0/0:20,0:19:18.96:0,19,185	0/0:28,0:28:80.87:0,81,764	0/0:20,0:20:54.09:0,54,521	0/0:13,0:13:36.04:0,36,342	0/0:38,0:38:99:0,99,947	0/0:27,0:27:78.10:0,78,747	0/0:31,0:31:81.12:0,81,779	0/0:15,0:15:39.03:0,39,367	0/0:12,0:12:36.04:0,36,341	0/0:17,0:17:48.08:0,48,463	0/0:24,0:24:66.11:0,66,637	1/1:0,15:15:45.14:544,45,0	0/0:15,0:15:42.03:0,42,394	0/0:17,0:17:48.06:0,48,458	0/0:10,0:10:24.03:0,24,232	0/0:26,0:25:60.09:0,60,575	0/0:26,0:26:69.10:0,69,661	0/0:15,0:15:42.06:0,42,405	0/0:20,0:20:48.06:0,48,457	0/0:18,0:18:51.08:0,51,492	0/0:9,0:9:24.01:0,24,225	0/0:19,0:19:54.06:0,54,514	0/0:25,0:25:69.11:0,69,666	0/0:25,0:25:69.01:0,69,643	0/0:15,0:15:42.07:0,42,405
chr10	33595809	.	GT	G	14950.41	PASS	AC=38;AF=0.704;AN=54;BaseQRankSum=18.465;DP=624;FS=1.347;HRun=1;HaplotypeScore=100.7819;InbreedingCoeff=0.9944;MQ=91.81;MQ0=0;MQRankSum=-4.609;QD=36.64;ReadPosRankSum=2.788;VQSLOD=5.0321;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	1/1:1,11:12:33.11:429,33,0	0/0:24,0:24:69.23:0,69,1084	0/0:26,0:26:74.61:0,75,1117	0/0:36,0:36:99:0,108,1702	0/0:19,0:19:57.19:0,57,909	0/0:18,0:18:54.17:0,54,835	1/1:2,31:33:90.28:1156,90,0	0/0:31,0:31:93.32:0,93,1484	1/1:0,27:27:81.26:1049,81,0	1/1:1,24:25:72.23:932,72,0	1/1:0,9:9:24.08:312,24,0	1/1:0,17:17:51.17:662,51,0	1/1:0,11:13:36.12:464,36,0	0/0:25,0:25:75.26:0,75,1199	1/1:0,24:24:66.21:857,66,0	0/0:37,0:37:99:0,111,1771	1/1:0,4:4:12.04:155,12,0	1/1:1,24:25:72.17:882,72,0	1/1:0,28:28:81.22:1029,81,0	1/1:0,25:25:66.21:857,66,0	1/1:0,17:17:48.16:623,48,0	1/1:0,25:25:75.24:977,75,0	1/1:0,22:22:60.20:779,60,0	1/1:0,23:23:66.21:857,66,0	1/1:0,29:29:87.26:1101,87,0	1/1:0,28:28:81.26:1051,81,0	1/1:0,22:22:60.20:779,60,0
chr10	33596187	.	T	TA	9414.97	PASS	AB=0.762;AC=40;AF=0.741;AN=54;BaseQRankSum=-11.525;DP=529;FS=4.159;HRun=9;HaplotypeScore=54.4828;InbreedingCoeff=0.8306;MQ=73.80;MQ0=0;MQRankSum=-1.980;QD=23.25;ReadPosRankSum=-0.295;VQSLOD=5.5443;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	1/1:1,10:10:21.02:219,21,0	0/0:20,0:18:29.76:0,30,237	0/0:10,0:8:17.99:0,18,154	0/0:31,0:31:89.95:0,90,773	0/0:28,0:28:77.97:0,78,676	0/0:15,0:15:41.97:0,42,361	1/1:4,28:33:87.02:915,87,0	0/1:14,1:15:1.84:2,0,226	1/1:5,31:38:89.03:898,89,0	1/1:4,16:20:36.01:369,36,0	1/1:3,15:18:42.11:465,42,0	1/1:4,13:17:30.08:332,30,0	1/1:0,12:12:30.08:332,30,0	1/1:2,14:16:36.10:398,36,0	1/1:1,17:19:22.06:460,22,0	0/0:20,0:20:47.97:0,48,416	1/1:3,11:14:7.04:305,7,0	1/1:6,13:19:38.61:403,39,0	1/1:4,19:23:56.97:584,57,0	1/1:1,8:9:21.06:230,21,0	1/1:1,16:17:45.04:479,45,0	1/1:3,18:21:48.13:531,48,0	1/1:0,15:15:42.11:465,42,0	0/1:5,12:17:18.98:266,0,19	1/1:6,24:30:28.42:736,28,0	1/1:2,27:29:63.17:697,63,0	1/1:2,10:12:30.08:332,30,0
chr10	33597455	.	A	ATTCTTTAC	1527.27	PASS	AC=2;AF=0.037;AN=54;BaseQRankSum=-4.052;DP=533;FS=1.118;HRun=0;HaplotypeScore=132.7581;InbreedingCoeff=0.9852;MQ=70.63;MQ0=0;MQRankSum=-5.861;QD=84.85;ReadPosRankSum=2.405;VQSLOD=3.8873;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	0/0:12,0:12:36.12:0,36,1089	0/0:8,0:8:21.05:0,21,419	0/0:9,0:9:26.06:0,26,447	0/0:28,0:28:81.28:0,81,2432	0/0:28,0:28:78.26:0,78,2293	0/0:7,0:7:21.05:0,21,508	0/0:24,0:24:69.24:0,69,2068	0/0:22,0:22:66.20:0,66,1805	0/0:20,0:20:60.20:0,60,1689	0/0:33,0:33:99:0,99,2975	0/0:14,0:14:42.14:0,42,1206	0/0:21,0:21:60.20:0,60,1709	0/0:22,0:22:66.21:0,66,1815	1/1:1,12:18:36.10:1622,36,0	0/0:22,0:22:66.21:0,66,1832	0/0:19,0:19:57.17:0,57,1586	0/0:7,0:7:21.07:0,21,636	0/0:11,0:10:33.08:0,33,872	0/0:39,0:39:99:0,117,3264	0/0:17,0:17:51.16:0,51,1478	0/0:19,0:19:57.18:0,57,1537	0/0:31,0:31:90.30:0,90,2613	0/0:14,0:14:42.12:0,42,1142	0/0:20,0:20:60.19:0,60,1627	0/0:23,0:23:69.21:0,69,1847	0/0:36,0:36:99:0,108,3101	0/0:9,0:9:27.09:0,27,783
chr10	33598291	.	CCT	C	4400.10	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=9.817;DP=635;FS=0.865;HRun=0;HaplotypeScore=81.3327;InbreedingCoeff=0.9970;MQ=92.40;MQ0=1;MQRankSum=-2.142;QD=42.31;ReadPosRankSum=2.515;VQSLOD=6.3043;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:72.25:0,72,1441	0/0:11,0:11:33.11:0,33,670	0/0:34,0:34:93.76:0,94,1754	0/0:24,0:24:69.20:0,69,1176	1/1:1,25:26:69.24:1121,69,0	1/1:0,18:17:48.16:783,48,0	1/1:0,12:12:30.10:490,30,0	0/0:26,0:26:78.27:0,78,1543	1/1:0,16:16:39.13:636,39,0	0/0:15,0:15:45.15:0,45,860	0/0:28,0:28:84.29:0,84,1662	0/0:20,0:20:60.21:0,60,1217	0/0:28,0:28:84.29:0,84,1663	0/0:27,0:27:81.28:0,81,1621	0/0:22,0:22:66.18:0,66,1300	0/0:24,0:24:72.25:0,72,1454	1/1:0,32:32:84.29:1371,84,0	0/0:7,0:7:21.07:0,21,427	0/0:19,0:19:57.20:0,57,1153	0/0:34,0:34:99:0,102,1974	0/0:25,0:25:75.26:0,75,1511	0/0:30,0:30:90.31:0,90,1819	0/0:20,0:20:60.21:0,60,1204	0/0:37,0:36:99:0,111,2256	0/0:21,0:21:63.22:0,63,1278	0/0:27,0:27:81.27:0,81,1611	0/0:21,0:20:63.22:0,63,1268	0/0:6,0:6:18.05:0,18,330
chr10	33598642	.	CT	C	617.58	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.163;DP=472;FS=8.743;HRun=1;HaplotypeScore=62.1152;InbreedingCoeff=0.9820;MQ=73.07;MQ0=0;MQRankSum=-1.686;QD=28.07;ReadPosRankSum=-0.823;VQSLOD=2.2964;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,22:22:51.17:712,51,0	0/0:9,0:9:27.09:0,27,426	0/0:20,0:19:52.67:0,53,820	0/0:16,0:16:41.35:0,41,598	0/0:17,0:17:48.14:0,48,742	0/0:16,0:16:48.16:0,48,767	0/0:5,0:5:15.05:0,15,240	0/0:39,0:39:99:0,114,1753	0/0:13,0:13:39.10:0,39,575	0/0:14,0:13:39.13:0,39,623	0/0:20,0:19:57.19:0,57,905	0/0:17,0:17:51.17:0,51,777	0/0:18,0:18:54.18:0,54,861	0/0:18,0:18:51.17:0,51,809	0/0:16,0:16:48.16:0,48,762	0/0:13,0:13:36.10:0,36,528	0/0:17,0:17:51.13:0,51,770	0/0:13,0:13:39.13:0,39,611	0/0:29,0:29:87.30:0,87,1370	0/0:12,0:12:33.11:0,33,526	0/0:15,0:15:45.15:0,45,720	0/0:14,0:14:42.14:0,42,669	0/0:11,0:11:33.11:0,33,526	0/0:12,0:12:36.12:0,36,576	0/0:14,0:14:42.14:0,42,670	0/0:25,1:26:30.33:0,30,1053	0/0:20,0:20:51.17:0,51,814	0/0:16,0:15:45.15:0,45,719
chr10	33602110	.	T	TC	381.86	PASS	AB=0.818;AC=16;AF=0.320;AN=50;BaseQRankSum=3.282;DP=307;FS=0.000;HRun=0;HaplotypeScore=29.5118;InbreedingCoeff=-0.0828;MQ=30.82;MQ0=79;MQRankSum=0.056;QD=2.30;ReadPosRankSum=-0.549;VQSLOD=1.4012;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:10,0:4:0.36:0,0,36	1/1:0,1:1:3.01:36,3,0	0/0:10,0:1:2.97:0,3,20	0/0:5,0:1:2.22:0,2,7	0/1:13,2:10:41.76:42,0,274	0/0:8,0:7:8.67:0,9,159	0/0:14,0:8:21.02:0,21,264	0/0:24,0:7:21:0,21,247	0/0:2,0:1:3.01:0,3,41	0/1:7,1:3:27.55:28,0,73	0/1:8,5:6:32.61:43,0,33	./.	./.	./.	0/0:9,2:3:3.01:0,3,41	0/0:4,0:3:0:0,0,0	0/0:19,0:13:15.08:0,15,276	0/0:7,0:3:2.98:0,3,21	0/0:17,0:6:12.04:0,12,164	0/1:22,3:19:1.85:2,0,411	0/1:16,2:6:38.76:39,0,66	0/1:6,6:7:57.01:57,0,107	0/1:12,4:9:18.14:18,0,185	0/0:10,5:9:15.05:0,15,207	1/1:3,3:4:5.18:71,5,0	0/1:2,4:3:32.39:64,0,32	0/1:23,6:20:81.47:81,0,218	1/1:5,2:2:3.01:37,3,0
chr10	33615633	.	GA	G	3630.38	PASS	AB=0.726;AC=39;AF=0.696;AN=56;BaseQRankSum=-3.972;DP=381;FS=12.876;HRun=12;HaplotypeScore=78.4971;InbreedingCoeff=0.5197;MQ=51.51;MQ0=14;MQRankSum=-5.036;QD=12.92;ReadPosRankSum=2.069;VQSLOD=2.5105;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:8,9:16:29.94:187,0,30	1/1:1,4:5:14.94:116,15,0	0/0:34,0:6:7.79:0,8,47	0/1:32,0:10:18.31:18,0,25	0/0:14,0:20:53.81:0,54,299	0/0:10,0:10:17.03:0,17,99	0/0:3,0:7:18.10:0,18,104	1/1:5,6:10:18.97:126,19,0	0/0:6,0:10:17.84:0,18,95	1/1:3,10:12:9.12:208,9,0	1/1:3,11:14:5.84:225,6,0	1/1:1,8:9:20.80:155,21,0	1/1:4,6:10:4.25:122,4,0	0/1:2,6:7:9.98:104,0,10	1/1:2,0:7:14.26:42,14,0	1/1:1,6:7:20.30:147,20,0	0/0:11,0:15:34.52:0,35,199	1/1:6,4:9:20.83:155,21,0	0/1:11,6:14:2.99:157,0,3	1/1:2,16:18:47.80:371,48,0	1/1:4,2:6:5.91:46,6,0	1/1:1,6:6:17.93:139,18,0	1/1:4,10:13:2.62:202,3,0	1/1:6,5:8:14.94:116,15,0	1/1:1,6:6:17.93:139,18,0	0/1:8,8:14:3.59:159,0,4	1/1:4,18:22:33.11:412,33,0	1/1:7,10:16:37.66:283,38,0
chr10	33615650	.	GA	G	6322.44	PASS	AB=0.625;AC=51;AF=0.911;AN=56;BaseQRankSum=-2.805;DP=393;FS=44.445;HRun=9;HaplotypeScore=89.5538;InbreedingCoeff=0.6627;MQ=58.29;MQ0=10;MQRankSum=-1.285;QD=19.39;ReadPosRankSum=4.269;VQSLOD=2.5432;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,14:13:36.02:329,36,0	1/1:2,5:7:18.01:164,18,0	0/0:37,0:13:34.25:0,34,296	0/0:28,0:9:8.03:0,8,65	1/1:11,13:22:47.23:505,47,0	1/1:4,5:9:21:192,21,0	1/1:6,3:8:8.99:82,9,0	1/1:7,7:11:11.59:109,12,0	1/1:2,7:9:20.84:191,21,0	1/1:3,15:18:41.80:384,42,0	1/1:1,11:12:33.02:302,33,0	1/1:4,6:9:15:137,15,0	1/1:5,7:12:0.28:168,0,0	1/1:2,7:8:18.01:164,18,0	1/1:2,7:9:21.01:192,21,0	1/1:1,6:7:18:165,18,0	1/1:12,6:18:12.78:278,13,0	0/1:4,6:9:1.23:118,0,1	1/1:4,12:15:36.02:329,36,0	1/1:2,18:20:51.02:466,51,0	1/1:0,5:5:11.28:108,11,0	1/1:2,8:9:21.01:192,21,0	1/1:3,9:11:30.02:274,30,0	1/1:3,5:7:15:137,15,0	1/1:2,11:11:24.01:219,24,0	1/1:4,10:12:30.01:274,30,0	1/1:4,20:24:65.98:595,66,0	1/1:4,9:12:27.01:247,27,0
chr10	33616188	.	GA	G	9853.61	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=8.872;DP=595;FS=8.181;HRun=6;HaplotypeScore=108.5576;InbreedingCoeff=0.9988;MQ=88.74;MQ0=0;MQRankSum=-5.529;QD=27.45;ReadPosRankSum=3.279;VQSLOD=4.4616;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,135,1675	1/1:2,15:17:39.10:418,39,0	0/0:25,0:24:60.18:0,60,737	0/0:32,0:32:65.17:0,65,863	0/0:20,0:20:54.16:0,54,686	0/0:23,0:23:66.19:0,66,830	0/0:16,0:16:45.14:0,45,571	1/1:0,15:15:42.09:443,42,0	0/0:21,0:21:51.15:0,51,648	1/1:2,11:13:33.07:347,33,0	1/1:1,16:17:42.10:450,42,0	1/1:1,12:13:35.92:368,36,0	1/1:1,12:13:36.09:386,36,0	1/1:3,19:22:48.12:515,48,0	0/0:1,0:35:82.87:0,83,431	1/1:0,10:10:21.05:225,21,0	0/0:16,0:16:45.11:0,45,554	1/1:1,9:10:27.07:289,27,0	1/1:1,18:19:54.04:534,54,0	1/1:2,14:16:39.03:404,39,0	1/1:2,32:34:93.23:998,93,0	1/1:2,26:28:75.19:804,75,0	1/1:1,23:24:63.16:675,63,0	1/1:0,20:20:57.14:611,57,0	1/1:1,27:28:63.16:676,63,0	1/1:1,21:22:63.11:662,63,0	1/1:1,29:30:75.15:791,75,0	1/1:0,8:8:24.06:257,24,0
chr10	33618031	.	CAACAA	C	879.63	PASS	AB=0.944;AC=3;AF=0.054;AN=56;BaseQRankSum=0.931;DP=495;FS=0.000;HRun=0;HaplotypeScore=108.4056;InbreedingCoeff=0.5810;MQ=81.65;MQ0=2;MQRankSum=-2.063;QD=21.45;ReadPosRankSum=2.632;VQSLOD=3.3667;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:75.23:0,75,1897	0/0:12,0:12:28.34:0,28,634	0/0:31,0:21:39.25:0,39,410	0/0:23,0:15:32.40:0,32,290	0/0:31,0:31:93.27:0,93,2334	0/0:14,0:14:42.12:0,42,1036	0/0:17,0:17:50.75:0,51,1122	0/0:23,0:22:63.11:0,63,1049	0/1:16,1:17:16.66:17,0,740	0/0:20,0:20:54.13:0,54,1084	0/0:27,0:27:81:0,81,1256	0/0:8,0:8:24.05:0,24,408	0/0:12,0:12:18.05:0,18,348	0/0:17,0:17:27.03:0,27,399	1/1:0,24:24:45.15:968,45,0	0/0:6,0:7:21.01:0,21,323	0/0:19,0:19:52.23:0,52,1385	0/0:9,0:10:11.87:0,12,177	0/0:9,0:9:27.02:0,27,351	0/0:26,0:26:69.07:0,69,1144	0/0:10,0:10:24.06:0,24,465	0/0:18,0:18:51.14:0,51,882	0/0:17,0:17:30.01:0,30,525	0/0:10,0:10:9:0,9,123	0/0:16,0:16:33.10:0,33,675	0/0:23,0:24:71.90:0,72,1300	0/0:22,0:22:50.83:0,51,984	0/0:5,0:5:9.03:0,9,196
chr10	33618034	.	C	CAA	5767.62	PASS	AB=0.899;AC=39;AF=0.696;AN=56;BaseQRankSum=-1.914;DP=567;FS=0.874;HRun=12;HaplotypeScore=92.7786;InbreedingCoeff=0.6809;MQ=77.30;MQ0=2;MQRankSum=3.179;QD=14.24;ReadPosRankSum=-5.083;VQSLOD=2.6897;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:61.93:0,62,555	1/1:1,11:14:27.82:335,28,0	0/1:31,0:19:15.07:15,0,34	0/1:24,0:15:16.87:17,0,28	0/0:31,0:32:48.87:0,49,606	0/0:16,0:18:29.48:0,29,297	0/0:17,0:18:17.76:0,18,255	1/1:14,15:30:57.05:631,57,0	0/0:18,0:21:30.93:0,31,209	1/1:5,21:28:36.15:655,36,0	1/1:12,19:32:59:587,59,0	1/1:10,0:10:10:157,10,0	1/1:1,13:15:14.92:182,15,0	1/1:6,1:15:17.51:166,18,0	0/0:24,0:24:33.71:0,34,166	1/1:5,2:7:15.03:178,15,0	0/0:20,0:21:43.30:0,43,382	1/1:3,10:13:10.24:94,10,0	1/1:8,0:17:27.42:241,27,0	1/1:7,22:30:58.27:684,58,0	0/1:5,1:8:10.75:110,0,11	1/1:13,4:18:36.31:374,36,0	1/1:3,14:21:22.93:231,23,0	1/1:4,9:14:3.48:43,3,0	1/1:3,13:19:23.05:270,23,0	1/1:17,6:25:23.40:449,23,0	1/1:8,12:24:3.80:278,4,0	1/1:2,5:8:8.46:70,8,0
chr10	33618300	.	G	GT	8495.76	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-15.525;DP=569;FS=0.000;HRun=10;HaplotypeScore=71.2802;InbreedingCoeff=0.9293;MQ=69.65;MQ0=0;MQRankSum=-0.418;QD=23.73;ReadPosRankSum=1.497;VQSLOD=5.4707;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:2,0:18:32.59:0,33,94	1/1:3,13:16:33.08:352,33,0	0/0:15,0:12:9:0,9,174	0/0:18,0:14:12.15:0,12,84	0/0:3,0:33:56.38:0,56,172	0/0:1,0:15:26.48:0,26,77	0/0:2,0:20:30.55:0,31,88	0/0:25,1:26:58.92:0,59,541	0/0:2,0:18:32.59:0,33,94	1/1:3,25:28:47.50:695,48,0	1/1:6,18:26:56.81:572,57,0	1/1:6,14:20:33.08:352,33,0	1/1:4,15:19:45.11:479,45,0	1/1:1,18:19:48.12:511,48,0	0/0:1,0:24:42.78:0,43,124	1/1:1,14:15:39.10:416,39,0	0/0:1,0:23:36.66:0,37,106	1/1:1,9:11:29.94:302,30,0	1/1:1,15:17:47.91:484,48,0	1/1:2,14:16:42.11:447,42,0	1/1:5,10:15:2.43:229,2,0	1/1:5,16:22:24.32:436,24,0	1/1:5,20:25:22.83:629,23,0	1/1:4,9:13:2.42:231,2,0	1/1:1,18:20:54.86:560,55,0	1/1:5,30:35:40.93:840,41,0	1/1:7,25:31:50.54:737,51,0	1/1:0,9:9:21.05:224,21,0
chr10	33619172	.	C	CTCT	591.65	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.365;DP=684;FS=2.334;HRun=0;HaplotypeScore=110.1133;InbreedingCoeff=0.9937;MQ=78.32;MQ0=4;MQRankSum=-3.740;QD=24.65;ReadPosRankSum=0.219;VQSLOD=3.5235;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:90.09:0,90,1620	0/0:8,0:8:24.08:0,24,447	0/0:33,0:25:32.24:0,32,758	0/0:73,0:52:99:0,118,1824	0/0:27,0:27:72.25:0,72,1338	0/0:32,0:31:93.28:0,93,1659	0/0:25,0:25:75.26:0,75,1360	0/0:32,0:32:81.57:0,82,1469	0/0:23,0:23:69.24:0,69,1265	0/0:24,0:24:69.22:0,69,1243	0/0:17,0:17:48.16:0,48,894	0/0:21,0:21:63.22:0,63,1172	0/0:15,0:15:45.15:0,45,825	0/0:26,0:26:72.24:0,72,1300	1/1:0,17:24:30.10:686,30,0	0/0:26,0:26:72.25:0,72,1312	0/0:25,0:26:72.25:0,72,1341	0/0:13,0:14:21.78:0,22,697	0/0:25,0:25:72.24:0,72,1250	0/0:27,0:27:78.27:0,78,1418	0/0:16,0:16:45.15:0,45,820	0/0:19,0:19:57.20:0,57,1062	0/0:27,0:27:78.20:0,78,1428	0/0:15,0:15:45.15:0,45,838	0/0:14,0:14:42.14:0,42,773	0/0:20,0:20:57.20:0,57,1062	0/0:24,0:24:63.22:0,63,1130	0/0:16,0:16:48.16:0,48,877
chr10	33619173	.	G	GTCTGTC	747.14	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.066;DP=692;FS=0.000;HRun=0;HaplotypeScore=153.5705;InbreedingCoeff=0.9490;MQ=78.63;MQ0=4;MQRankSum=-4.372;QD=32.48;ReadPosRankSum=-0.212;VQSLOD=3.2085;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:78.26:0,78,1634	0/0:8,0:8:21.07:0,21,437	0/0:33,0:25:9.90:0,10,367	0/0:77,0:54:70.58:0,71,1151	0/0:27,0:27:69.16:0,69,1262	0/0:32,0:31:78.23:0,78,1554	0/0:25,0:25:66.20:0,66,1281	0/0:32,0:32:56.68:0,57,897	0/0:24,0:24:66.23:0,66,1394	0/0:24,0:24:54.13:0,54,979	0/0:17,0:17:48.16:0,48,1019	0/0:21,0:21:60.19:0,60,1257	0/0:16,0:16:36.12:0,36,763	0/0:26,0:26:60.18:0,60,1224	1/1:13,8:23:30.10:842,30,0	0/0:26,0:26:66.19:0,66,1294	0/0:28,0:28:63.22:0,63,1346	0/0:14,0:14:31.66:0,32,652	0/0:25,0:25:54.13:0,54,957	0/0:29,0:29:63.18:0,63,1231	0/0:16,0:16:39.12:0,39,739	0/0:20,0:20:51.16:0,51,1027	0/0:28,0:28:69.71:0,70,1409	0/0:15,0:15:42.13:0,42,868	0/0:14,0:14:36.12:0,36,778	0/0:20,0:20:60.20:0,60,1238	0/0:23,0:23:54.14:0,54,1035	0/0:16,0:16:42.13:0,42,809
chr10	33619390	.	A	AG	643.57	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.888;DP=602;FS=1.952;HRun=2;HaplotypeScore=58.6211;InbreedingCoeff=0.9837;MQ=75.05;MQ0=0;MQRankSum=-1.015;QD=29.25;ReadPosRankSum=0.290;VQSLOD=3.1008;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:72.23:0,72,889	0/0:6,0:6:18.06:0,18,223	0/0:12,0:12:33.10:0,33,409	0/0:14,0:14:33.10:0,33,397	0/0:28,0:28:78.20:0,78,942	0/0:25,0:25:75.19:0,75,912	0/0:11,0:11:33.09:0,33,395	0/0:30,0:30:84.26:0,84,1031	0/0:21,0:21:57.18:0,57,703	0/0:32,0:32:90.28:0,90,1106	0/0:27,0:27:81.23:0,81,979	0/0:11,0:11:27.06:0,27,312	0/0:18,0:18:51.16:0,51,632	0/0:33,0:33:99:0,99,1192	1/1:3,19:22:22.99:737,23,0	0/0:20,0:20:60.19:0,60,744	0/0:23,0:23:69.22:0,69,855	0/0:7,0:7:21.07:0,21,259	0/0:16,0:16:45.13:0,45,537	0/0:39,0:39:99:0,117,1440	0/0:33,0:33:93.26:0,93,1125	0/0:25,0:25:72.21:0,72,880	0/0:23,0:23:66.21:0,66,818	0/0:14,0:14:42.13:0,42,521	0/0:16,0:16:39.12:0,39,483	0/0:24,0:24:66.21:0,66,818	0/0:24,0:24:72.21:0,72,880	0/0:22,0:21:66.19:0,66,805
chr10	33620162	.	G	GA	459.02	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.559;DP=666;FS=4.711;HRun=8;HaplotypeScore=66.0252;InbreedingCoeff=0.9857;MQ=84.17;MQ0=0;MQRankSum=-2.034;QD=27.00;ReadPosRankSum=1.389;VQSLOD=4.4689;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:78.02:0,78,708	0/0:7,0:7:18.01:0,18,164	0/0:25,0:25:54.32:0,54,468	0/0:15,0:15:26.87:0,27,225	0/0:32,0:32:90.05:0,90,823	0/0:31,0:31:87.02:0,87,791	0/0:12,0:12:36.02:0,36,330	0/0:32,0:32:87.03:0,87,796	0/0:24,0:24:63.03:0,63,577	0/0:45,0:45:99:0,126,1149	0/0:30,0:30:81.04:0,81,741	0/0:17,0:17:51.03:0,51,467	0/0:20,0:20:37.18:0,37,470	0/0:26,0:26:75.04:0,75,686	1/1:1,16:17:48.14:554,48,0	0/0:8,0:8:24.01:0,24,219	0/0:17,0:17:48.03:0,48,439	0/0:10,0:10:24.01:0,24,220	0/0:19,0:19:48.03:0,48,439	0/0:36,0:36:96.04:0,96,878	0/0:28,0:28:75.03:0,75,686	0/0:38,0:38:96.03:0,96,873	0/0:25,0:25:69.04:0,69,632	0/0:21,1:22:28.42:0,28,515	0/0:22,0:22:54.02:0,54,494	0/0:30,0:30:84.04:0,84,769	0/0:38,0:37:99:0,102,925	0/0:13,0:13:32.81:0,33,302
chr10	33620343	.	T	TATGCAC	759.64	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.123;DP=667;FS=5.066;HRun=0;HaplotypeScore=138.1450;InbreedingCoeff=0.9979;MQ=86.79;MQ0=0;MQRankSum=-5.060;QD=69.06;ReadPosRankSum=1.915;VQSLOD=4.4419;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:75.24:0,75,1816	0/0:9,0:9:27.09:0,27,692	0/0:26,0:26:72.22:0,72,1608	0/0:19,0:19:57.07:0,57,1310	0/0:34,0:34:99:0,99,2481	0/0:27,0:27:81.26:0,81,2024	0/0:28,0:28:84.26:0,84,2024	0/0:41,0:41:99:0,123,2858	0/0:29,0:29:87.30:0,87,2178	0/0:33,0:33:96.33:0,96,2460	0/0:23,0:23:69.24:0,69,1742	0/0:16,0:16:48.15:0,48,1168	0/0:19,0:19:54.18:0,54,1296	0/0:17,0:17:51.18:0,51,1287	1/1:0,11:11:27.09:854,27,0	0/0:19,0:19:57.20:0,57,1453	0/0:19,0:19:48.13:0,48,1085	0/0:19,0:19:51.13:0,51,1239	0/0:22,0:22:63.20:0,63,1534	0/0:35,0:35:99:0,105,2599	0/0:20,0:20:57.20:0,57,1451	0/0:24,0:24:72.25:0,72,1827	0/0:39,0:39:99:0,114,2815	0/0:17,0:17:51.16:0,51,1225	0/0:21,0:21:60.21:0,60,1538	0/0:29,0:29:87.30:0,87,2200	0/0:31,0:31:90.30:0,90,2247	0/0:14,0:14:42.11:0,42,1020
chr10	33620345	.	T	TGTCACA	1077.61	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.141;DP=675;FS=13.346;HRun=0;HaplotypeScore=141.6100;InbreedingCoeff=0.9989;MQ=85.29;MQ0=0;MQRankSum=-6.094;QD=59.87;ReadPosRankSum=0.776;VQSLOD=3.6575;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:75.24:0,75,1864	0/0:9,0:9:27.09:0,27,692	0/0:25,0:25:74.88:0,75,1591	0/0:18,0:18:51.15:0,51,1221	0/0:33,0:33:99:0,99,2481	0/0:27,0:27:81.26:0,81,2024	0/0:27,0:27:81.26:0,81,2020	0/0:42,0:42:99:0,123,2948	0/0:29,0:29:87.27:0,87,2118	0/0:33,0:33:99:0,99,2488	0/0:23,0:23:69.24:0,69,1769	0/0:16,0:16:48.16:0,48,1217	0/0:19,0:19:54.16:0,54,1255	0/0:17,0:17:51.16:0,51,1255	1/1:7,11:18:39.10:1172,39,0	0/0:20,0:20:60.19:0,60,1453	0/0:19,0:19:48.12:0,48,1056	0/0:20,0:20:54.18:0,54,1330	0/0:23,0:23:63.22:0,63,1586	0/0:35,0:35:99:0,102,2483	0/0:20,0:20:57.20:0,57,1461	0/0:26,0:26:72.23:0,72,1793	0/0:38,0:38:99:0,111,2792	0/0:17,0:17:51.13:0,51,1246	0/0:21,0:21:63.22:0,63,1592	0/0:29,0:29:87.30:0,87,2203	0/0:31,0:31:90.31:0,90,2217	0/0:14,0:14:42.14:0,42,1062
chr10	33620356	.	C	CT	526.56	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.172;DP=673;FS=13.479;HRun=0;HaplotypeScore=69.9295;InbreedingCoeff=0.9994;MQ=84.81;MQ0=0;MQRankSum=-6.121;QD=27.71;ReadPosRankSum=1.124;VQSLOD=2.9546;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:72.24:0,72,1007	0/0:10,0:10:30.07:0,30,400	0/0:27,0:27:76.78:0,77,1023	0/0:15,0:15:45.15:0,45,629	0/0:32,0:32:96.28:0,96,1303	0/0:30,0:30:90.25:0,90,1203	0/0:25,0:25:75.23:0,75,1031	0/0:36,0:36:99:0,105,1440	0/0:30,0:30:90.30:0,90,1255	0/0:38,0:38:99:0,114,1594	0/0:25,0:25:75.24:0,75,1033	0/0:17,0:17:51.17:0,51,713	0/0:17,0:17:51.15:0,51,695	0/0:16,0:16:48.15:0,48,653	1/1:0,19:19:39.13:621,39,0	0/0:19,0:19:57.19:0,57,797	0/0:14,0:14:42.11:0,42,567	0/0:20,0:20:60.17:0,60,817	0/0:22,0:22:66.22:0,66,919	0/0:35,0:35:99:0,105,1449	0/0:21,0:21:63.12:0,63,805	0/0:24,0:24:72.23:0,72,990	0/0:37,0:37:99:0,108,1510	0/0:18,0:18:54.16:0,54,737	0/0:23,0:23:69.23:0,69,962	0/0:28,0:28:84.28:0,84,1175	0/0:33,0:33:99:0,99,1382	0/0:17,0:17:51.11:0,51,657
chr10	33620421	.	T	TA	532.58	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.379;DP=654;FS=0.991;HRun=1;HaplotypeScore=60.8406;InbreedingCoeff=0.9957;MQ=84.63;MQ0=0;MQRankSum=-4.184;QD=25.36;ReadPosRankSum=-0.962;VQSLOD=3.2551;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:69.22:0,69,895	0/0:7,0:7:21.07:0,21,273	0/0:21,0:21:63.19:0,63,801	0/0:19,0:19:38.27:0,38,504	0/0:34,0:34:99:0,102,1308	0/0:31,0:31:90.29:0,90,1168	0/0:15,0:15:45.15:0,45,584	0/0:37,0:37:99:0,102,1260	0/0:25,0:25:75.24:0,75,971	0/0:35,0:35:96.31:0,96,1247	0/0:26,0:26:75.24:0,75,974	0/0:15,0:15:42.13:0,42,533	0/0:20,0:20:57.16:0,57,708	0/0:18,0:18:54.18:0,54,700	1/1:1,20:21:42.14:627,42,0	0/0:23,0:23:69.19:0,69,866	0/0:20,0:20:60.17:0,60,762	0/0:15,0:15:42.14:0,42,545	0/0:18,0:18:51.17:0,51,662	0/0:36,0:36:99:0,102,1324	0/0:22,0:22:66.20:0,66,841	0/0:24,0:24:72.23:0,72,923	0/0:34,0:34:99:0,99,1270	0/0:12,0:12:36.12:0,36,467	0/0:27,0:27:78.23:0,78,997	0/0:27,0:27:81.26:0,81,1051	0/0:31,0:31:90.28:0,90,1150	0/0:17,0:17:51.17:0,51,662
chr10	33620670	.	CA	C	484.40	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.744;DP=643;FS=0.000;HRun=8;HaplotypeScore=67.5387;InbreedingCoeff=0.9829;MQ=80.50;MQ0=0;MQRankSum=-1.284;QD=19.38;ReadPosRankSum=1.576;VQSLOD=3.4237;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,25:25:60.10:579,60,0	0/0:9,0:9:27.08:0,27,317	0/0:17,0:17:39.57:0,40,452	0/0:15,0:15:15.04:0,15,170	0/0:26,0:26:78.24:0,78,942	0/0:20,1:21:31.16:0,31,633	0/0:16,0:16:45.10:0,45,519	0/0:27,0:27:78.22:0,78,924	0/0:31,0:31:78.24:0,78,942	0/0:31,0:31:87.26:0,87,1044	0/0:24,0:24:57.17:0,57,678	0/0:23,0:23:66.19:0,66,787	0/0:24,0:24:63.19:0,63,760	0/0:24,0:24:69.20:0,69,824	0/0:26,0:26:75.18:0,75,879	0/0:19,0:19:51.14:0,51,604	0/0:21,0:21:63.18:0,63,750	0/0:14,0:14:39.12:0,39,471	0/0:21,0:21:54.16:0,54,642	0/0:25,1:26:40.23:0,40,758	0/0:28,0:28:78.23:0,78,931	0/0:23,0:23:60.18:0,60,722	0/0:23,0:23:69.19:0,69,810	0/0:21,0:21:60.18:0,60,725	0/0:18,0:18:51.14:0,51,605	0/0:30,0:30:84.24:0,84,996	0/0:41,0:41:99:0,114,1357	0/0:19,0:19:48.04:0,48,534
chr10	33621379	.	A	ATT	1628.31	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=8.998;DP=729;FS=8.662;HRun=0;HaplotypeScore=95.5026;InbreedingCoeff=0.9919;MQ=77.93;MQ0=0;MQRankSum=-7.755;QD=56.15;ReadPosRankSum=-0.805;VQSLOD=2.9867;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:75.26:0,75,1224	0/0:16,0:16:45.15:0,45,730	0/0:17,0:17:42.07:0,42,638	0/0:19,0:19:37.86:0,38,712	0/0:32,0:32:96.31:0,96,1542	0/0:39,0:39:99:0,114,1856	0/0:15,0:15:45.15:0,45,734	0/0:35,0:35:96.32:0,96,1543	0/0:27,0:27:81.28:0,81,1322	0/0:35,0:35:99:0,105,1691	0/0:28,0:28:81.28:0,81,1322	0/0:30,0:30:90.31:0,90,1462	0/0:31,0:31:90.31:0,90,1462	0/0:24,0:24:72.25:0,72,1175	1/1:1,28:29:87.28:1723,87,0	0/0:22,0:22:66.23:0,66,1077	0/0:16,0:16:48.16:0,48,783	0/0:20,0:20:57.17:0,57,930	0/0:39,0:39:99:0,114,1837	0/0:34,0:34:99:0,102,1662	0/0:34,0:34:90.31:0,90,1466	0/0:26,0:26:78.27:0,78,1267	0/0:23,0:23:66.19:0,66,1028	0/0:21,0:21:63.22:0,63,1025	0/0:30,0:30:90.30:0,90,1442	0/0:24,0:24:69.24:0,69,1126	0/0:31,0:30:93.32:0,93,1517	0/0:6,0:6:18.06:0,18,294
chr10	33621386	.	GCAAGTTCC	G	1898.21	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=8.045;DP=731;FS=5.549;HRun=0;HaplotypeScore=187.3401;InbreedingCoeff=0.9919;MQ=82.19;MQ0=0;MQRankSum=-7.310;QD=75.93;ReadPosRankSum=1.591;VQSLOD=3.2618;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:84.27:0,84,3660	0/0:14,0:14:42.12:0,42,1828	0/0:20,0:20:50.20:0,50,1775	0/0:26,0:26:63.02:0,63,2232	0/0:34,0:34:99:0,102,4418	0/0:37,0:37:99:0,111,4825	0/0:12,0:12:36.12:0,36,1580	0/0:38,0:38:99:0,111,4863	0/0:27,0:27:81.28:0,81,3751	0/0:34,0:34:99:0,102,4196	0/0:28,0:28:84.29:0,84,3845	0/0:33,0:33:99:0,99,4455	0/0:30,0:30:90.29:0,90,3979	0/0:26,0:26:78.27:0,78,3451	1/1:1,23:25:66.23:1993,66,0	0/0:20,0:20:60.21:0,60,2783	0/0:17,0:17:51.15:0,51,2232	0/0:17,0:17:48.15:0,48,2065	0/0:34,0:34:99:0,102,4557	0/0:40,0:40:99:0,120,5395	0/0:32,0:32:96.29:0,96,4158	0/0:24,0:24:72.25:0,72,3144	0/0:25,0:25:75.24:0,75,3260	0/0:21,0:21:63.22:0,63,2862	0/0:30,0:30:90.31:0,90,4029	0/0:24,0:24:72.24:0,72,3231	0/0:29,0:28:87.30:0,87,3996	0/0:6,0:6:18.06:0,18,833
chr10	33621470	.	GA	G	776.21	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=8.013;DP=739;FS=18.484;HRun=2;HaplotypeScore=73.6710;InbreedingCoeff=0.9626;MQ=85.50;MQ0=0;MQRankSum=-2.815;QD=27.72;ReadPosRankSum=-0.085;VQSLOD=1.9909;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:40:99:0,123,1803	0/0:12,0:12:36.09:0,36,499	0/0:29,0:29:81.22:0,81,1106	0/0:20,0:20:50.35:0,50,780	0/0:30,0:30:89.63:0,90,1254	0/0:31,0:31:93.28:0,93,1335	0/0:23,0:23:69.20:0,69,993	0/0:35,0:35:99:0,102,1377	0/0:27,0:27:78.22:0,78,1108	0/0:34,0:34:99:0,102,1445	0/0:20,0:20:60.20:0,60,897	0/0:26,0:26:75.24:0,75,1098	0/0:33,0:33:96.31:0,96,1400	0/0:17,0:17:51.16:0,51,744	1/1:4,24:28:72.04:871,72,0	0/0:31,0:31:90.29:0,90,1312	0/0:22,0:22:66.19:0,66,944	0/0:6,0:6:18.02:0,18,244	0/0:26,0:26:69.21:0,69,996	0/0:47,0:46:99:0,135,1870	0/0:44,0:44:99:0,132,1934	0/0:28,0:28:81.26:0,81,1191	0/0:24,0:24:72.23:0,72,1056	0/0:22,0:22:66.18:0,66,946	0/0:27,0:27:78.24:0,78,1147	0/0:25,0:25:75.25:0,75,1107	0/0:27,0:27:78.25:0,78,1148	0/0:4,0:4:12.04:0,12,180
chr10	33622578	.	GGTGT	G	854.93	PASS	AB=0.843;AC=32;AF=0.762;AN=42;BaseQRankSum=-0.320;DP=536;FS=2.358;HRun=0;HaplotypeScore=105.3547;InbreedingCoeff=0.0563;MQ=60.72;MQ0=25;MQRankSum=-1.098;QD=2.29;ReadPosRankSum=0.640;VQSLOD=1.6124;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:20,2:22:3.15:83,0,3	0/0:3,0:4:2.74:0,3,12	./.	./.	./.	1/1:19,0:20:6.01:56,6,0	./.	0/0:25,0:24:0:0,0,0	1/1:16,0:20:12.01:112,12,0	1/1:25,0:22:9:79,9,0	0/0:8,0:8:0:0,0,0	1/1:19,0:26:6.01:56,6,0	./.	0/1:12,3:14:6.57:40,0,7	1/1:18,0:22:6.01:56,6,0	1/1:16,5:21:6.01:73,6,0	./.	0/1:18,0:17:15.69:45,0,16	./.	1/1:14,0:14:3.47:28,3,0	1/1:29,0:27:3.01:44,3,0	1/1:15,3:18:3.01:46,3,0	1/1:10,0:10:0.47:1,0,0	1/1:19,0:20:4.56:32,5,0	1/1:26,0:26:6:55,6,0	1/1:15,0:15:3:25,3,0	1/1:31,0:29:3.39:43,3,0	0/1:6,6:11:3.38:82,0,3
chr10	33622609	.	GT	G	139.01	PASS	AC=8;AF=0.148;AN=54;BaseQRankSum=4.903;DP=477;FS=0.000;HRun=1;HaplotypeScore=82.6167;InbreedingCoeff=0.9025;MQ=48.97;MQ0=25;MQRankSum=-3.909;QD=3.86;ReadPosRankSum=0.564;VQSLOD=-0.0018;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:24:31.40:0,31,331	0/0:6,0:6:8.39:0,8,83	0/0:12,0:3:9.03:0,9,113	0/0:22,0:10:24.07:0,24,287	./.	1/1:5,4:8:10.72:75,11,0	1/1:4,5:6:11.33:109,11,0	0/0:19,0:18:54.17:0,54,675	1/1:7,5:12:12.79:54,13,0	0/0:17,0:15:40.59:0,41,453	0/0:14,0:14:26.26:0,26,327	0/0:17,0:17:32.87:0,33,417	0/0:9,0:9:24.05:0,24,287	0/0:23,0:21:42.92:0,43,504	0/0:19,0:18:40.07:0,40,491	0/0:15,0:14:22.50:0,23,270	1/1:3,3:5:6.83:43,7,0	0/0:23,0:21:36.13:0,36,554	0/0:11,0:10:28.84:0,29,309	0/0:15,0:14:29.12:0,29,346	0/0:37,0:32:73.44:0,73,879	0/0:21,0:20:34.53:0,35,420	0/0:11,0:10:15.05:0,15,190	0/0:24,0:24:45.08:0,45,563	0/0:19,0:19:36.16:0,36,476	0/0:21,0:21:62.01:0,62,757	0/0:33,0:30:74.87:0,75,888	0/0:17,0:15:26.55:0,27,282
chr10	33622728	.	T	TTA	1419.90	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-7.520;DP=600;FS=2.596;HRun=0;HaplotypeScore=69.0286;InbreedingCoeff=0.9781;MQ=76.22;MQ0=0;MQRankSum=-1.148;QD=50.71;ReadPosRankSum=0.490;VQSLOD=4.5529;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:92.26:0,92,1407	0/0:11,0:11:33.10:0,33,509	0/0:17,0:17:51.15:0,51,748	0/0:12,0:12:29.25:0,29,474	0/0:37,0:37:99:0,111,1645	0/0:24,0:24:72.15:0,72,1106	0/0:14,0:14:41.95:0,42,524	0/0:20,0:20:60.17:0,60,904	0/0:24,0:25:72.64:0,73,1084	0/0:27,0:27:81.25:0,81,1228	0/0:25,0:25:75.21:0,75,1140	0/0:22,0:22:66.23:0,66,1065	0/0:19,0:19:57.13:0,57,823	0/0:25,0:25:72.22:0,72,1128	1/1:0,28:28:75.26:1515,75,0	0/0:19,0:19:57.06:0,57,796	0/0:18,0:18:51.15:0,51,795	0/0:23,0:23:66.10:0,66,972	0/0:11,0:11:33.10:0,33,504	0/0:32,0:32:93.28:0,93,1453	0/0:7,0:7:21.05:0,21,315	0/0:27,0:27:81.26:0,81,1261	0/0:20,0:20:57.19:0,57,916	0/0:11,0:11:30.06:0,30,435	0/0:29,0:29:81.24:0,81,1264	0/0:18,0:19:57.18:0,57,901	0/0:40,0:40:99:0,117,1771	0/0:5,0:5:14.79:0,15,206
chr10	33624013	.	G	GTT	6242.18	PASS	AB=0.651;AC=46;AF=0.821;AN=56;BaseQRankSum=-5.749;DP=546;FS=4.716;HRun=10;HaplotypeScore=89.3736;InbreedingCoeff=0.3606;MQ=79.58;MQ0=1;MQRankSum=-2.986;QD=12.41;ReadPosRankSum=4.327;VQSLOD=2.8389;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,0:32:64.88:228,65,0	1/1:2,0:12:22.46:79,22,0	0/0:20,0:19:30:0,30,294	0/1:9,0:10:4.48:4,0,73	1/1:4,30:36:92.75:1285,93,0	1/1:5,9:15:26.53:342,27,0	1/1:1,9:12:21.06:297,21,0	1/1:7,0:20:5.25:88,5,0	1/1:6,21:27:53.88:803,54,0	1/1:5,0:25:45.79:192,46,0	1/1:2,3:17:35.96:195,36,0	1/1:3,0:17:29.94:105,30,0	1/1:3,0:19:14.81:118,15,0	1/1:1,0:15:27.32:95,27,0	0/0:3,0:23:46.64:0,47,202	1/1:0,0:15:29.94:105,30,0	1/1:2,21:25:65.63:904,66,0	0/1:4,0:9:16.38:33,0,16	0/1:10,1:29:0.08:160,0,0	1/1:5,1:32:68.86:301,69,0	1/1:2,0:13:24.95:88,25,0	1/1:1,0:15:21.27:104,21,0	0/1:3,1:22:7.05:149,0,7	0/1:5,0:15:4.51:59,0,5	0/1:3,1:19:19.67:117,0,20	1/1:4,0:25:52.90:199,53,0	1/1:3,0:18:37.43:132,37,0	1/1:0,0:7:17.47:61,17,0
chr10	33627386	.	C	CAT	675.17	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-5.532;DP=444;FS=6.882;HRun=0;HaplotypeScore=49.6753;InbreedingCoeff=0.9703;MQ=76.75;MQ0=0;MQRankSum=-2.422;QD=39.72;ReadPosRankSum=1.007;VQSLOD=5.3718;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:63.09:0,63,802	0/0:7,0:7:21.06:0,21,283	0/0:13,0:13:33.09:0,33,430	0/0:7,0:7:18.03:0,18,220	0/0:14,0:14:39.13:0,39,559	0/0:27,0:27:81.24:0,81,1122	0/0:15,0:15:42.12:0,42,581	0/0:35,0:35:93.31:0,93,1317	0/0:16,0:16:48.16:0,48,687	0/0:21,0:21:60.19:0,60,840	0/0:22,0:22:66.21:0,66,928	0/0:11,0:11:33.11:0,33,473	0/0:15,0:15:45.15:0,45,645	0/0:15,0:15:45.14:0,45,626	1/1:3,14:17:42.14:770,42,0	0/0:11,0:11:30.10:0,30,430	0/0:19,0:19:57.17:0,57,796	0/0:18,0:18:51.14:0,51,706	0/0:11,0:11:27.07:0,27,352	0/0:24,0:24:66.22:0,66,944	0/0:13,0:13:39.07:0,39,500	0/0:7,0:7:21.06:0,21,283	0/0:12,0:12:36.11:0,36,498	0/0:9,0:9:21.07:0,21,301	0/0:17,0:17:51.17:0,51,729	0/0:20,0:20:60.20:0,60,858	0/0:18,0:18:54.11:0,54,731	0/0:6,0:6:18.02:0,18,219
chr10	33627619	.	GC	G	4111.72	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=12.724;DP=483;FS=0.000;HRun=1;HaplotypeScore=64.0803;InbreedingCoeff=0.9971;MQ=83.39;MQ0=0;MQRankSum=-3.062;QD=35.14;ReadPosRankSum=3.349;VQSLOD=3.6093;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,30:30:84.21:1150,84,0	0/0:6,0:6:18.06:0,18,288	0/0:16,0:15:44.94:0,45,607	0/0:15,0:15:45.04:0,45,633	1/1:0,20:20:51.03:656,51,0	1/1:0,18:18:45.15:629,45,0	1/1:0,13:13:30.10:419,30,0	0/0:30,0:30:90.27:0,90,1354	1/1:0,17:17:42.14:587,42,0	0/0:13,0:13:39.13:0,39,623	0/0:10,0:10:27.09:0,27,428	0/0:18,0:18:54.18:0,54,863	0/0:27,0:27:81.28:0,81,1293	0/0:19,0:19:57.19:0,57,910	0/0:23,0:23:69.22:0,69,1075	0/0:18,0:18:54.17:0,54,836	1/1:0,19:19:48.16:671,48,0	0/0:20,0:20:60.20:0,60,952	0/0:19,0:19:57.16:0,57,863	0/0:15,0:15:45.14:0,45,693	0/0:15,0:15:45.15:0,45,708	0/0:11,0:11:33.10:0,33,504	0/0:7,0:7:21.07:0,21,336	0/0:23,0:23:69.22:0,69,1079	0/0:12,0:12:36.12:0,36,575	0/0:18,0:18:54.18:0,54,837	0/0:17,0:17:51.06:0,51,733	0/0:14,0:14:42.14:0,42,663
chr10	33628898	.	AT	A	5014.06	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=-8.615;DP=497;FS=4.957;HRun=11;HaplotypeScore=80.1132;InbreedingCoeff=0.9578;MQ=64.32;MQ0=6;MQRankSum=5.060;QD=17.11;ReadPosRankSum=4.243;VQSLOD=5.8370;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:27:57.61:0,58,330	1/1:0,7:7:17.98:148,18,0	0/0:15,0:10:16.52:0,17,110	0/0:10,0:7:8.92:0,9,62	0/0:8,0:30:74.26:0,74,390	0/0:4,0:11:25.83:0,26,138	0/0:7,0:21:45.91:0,46,257	1/1:9,16:22:50.91:416,51,0	0/0:2,0:9:23.10:0,23,131	1/1:4,23:27:65.83:532,66,0	1/1:3,15:18:35.91:295,36,0	0/0:14,0:14:42.07:0,42,426	1/1:2,12:13:32.96:271,33,0	1/1:3,11:13:32.94:271,33,0	0/0:9,0:15:28.41:0,28,151	1/1:2,8:10:20.97:172,21,0	0/0:7,0:13:20.32:0,20,128	1/1:2,7:9:23.48:179,23,0	1/1:6,13:20:40.93:321,41,0	1/1:7,16:23:41.92:345,42,0	1/1:2,14:17:26.93:222,27,0	1/1:7,11:18:26.94:222,27,0	0/0:25,0:25:54.61:0,55,577	0/0:8,2:11:2.27:0,2,206	1/1:3,20:22:56.93:468,57,0	1/1:3,22:26:64.31:507,64,0	1/1:3,24:28:61.84:498,62,0	1/1:6,7:13:17.98:148,18,0
chr10	33628914	.	CT	C	152.67	PASS	AB=0.930;AC=8;AF=0.143;AN=56;BaseQRankSum=-0.449;DP=507;FS=6.061;HRun=12;HaplotypeScore=94.1050;InbreedingCoeff=0.3595;MQ=55.39;MQ0=15;MQRankSum=-2.427;QD=1.40;ReadPosRankSum=-0.145;VQSLOD=-0.5216;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:29:49.11:0,49,280	0/0:8,0:8:21.04:0,21,212	1/1:12,0:7:2.74:13,3,0	0/0:6,0:3:0:0,0,0	0/0:23,0:32:63.64:0,64,381	0/0:2,0:11:17.26:0,17,94	0/0:13,0:21:39.71:0,40,211	0/0:28,0:26:22.69:0,23,360	0/1:5,1:14:4.17:4,0,84	0/0:21,0:21:42.06:0,42,414	0/0:14,1:15:12.83:0,13,312	0/0:13,0:13:18.32:0,18,231	0/0:15,1:15:12.85:0,13,305	0/0:15,1:15:18.84:0,19,366	1/1:8,7:15:29.86:231,30,0	0/1:9,0:9:2.01:2,0,152	0/0:12,0:14:24.90:0,25,128	0/0:11,1:11:0.63:0,1,162	0/0:22,1:23:21.86:0,22,403	0/0:23,1:23:9.51:0,10,219	0/0:18,0:16:25.33:0,25,237	0/0:15,0:13:27:0,27,256	0/1:26,3:29:14.77:15,0,501	0/0:8,0:8:14.72:0,15,166	0/0:21,1:22:26.88:0,27,250	0/1:26,2:29:9.67:10,0,417	0/0:26,1:25:31.11:0,31,451	0/0:11,0:10:27.05:0,27,273
chr10	33629376	.	GAGAGACAGAGACAGAGAC	G	3889.90	PASS	AB=1.000;AC=19;AF=0.365;AN=52;BaseQRankSum=7.469;DP=804;FS=0.000;HRun=0;HaplotypeScore=323.5965;InbreedingCoeff=0.7885;MQ=69.38;MQ0=6;MQRankSum=-7.398;QD=13.14;ReadPosRankSum=0.703;VQSLOD=1.7207;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:47,0:46:62.65:258,0,63	0/0:7,0:7:9.03:0,9,718	./.	./.	1/1:16,14:30:9.40:365,9,0	1/1:22,19:41:17.12:733,17,0	1/1:13,0:13:6:92,6,0	0/0:46,0:44:17.76:0,18,135	1/1:13,19:32:18.06:840,18,0	0/0:27,0:26:39.13:0,39,2355	0/0:19,0:19:21.07:0,21,1374	1/1:10,0:31:12.04:425,12,0	0/0:48,0:48:75.26:0,75,5302	0/0:30,0:30:51.15:0,51,3139	1/1:14,15:29:18.06:815,18,0	0/0:22,0:22:24.08:0,24,1512	1/1:25,1:26:9.47:298,9,0	0/0:26,0:25:33.06:0,33,1871	0/0:23,0:23:27.09:0,27,1755	0/0:22,0:22:21.06:0,21,1297	0/0:33,0:33:54.12:0,54,3710	0/0:22,0:22:51.16:0,51,3334	1/1:13,0:19:3.01:61,3,0	1/1:7,0:28:0.47:1,0,0	0/0:14,0:14:21.06:0,21,1334	0/0:32,0:32:27.07:0,27,1763	0/0:36,0:36:57.19:0,57,4573	0/0:6,0:6:9.03:0,9,719
chr10	33629378	.	GAGACAGAGACAGAGAC	G	2491.31	PASS	AB=0.942;AC=8;AF=0.143;AN=56;BaseQRankSum=9.821;DP=800;FS=0.000;HRun=0;HaplotypeScore=298.0697;InbreedingCoeff=-0.1797;MQ=68.69;MQ0=7;MQRankSum=-7.105;QD=9.93;ReadPosRankSum=0.315;VQSLOD=1.9704;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:6,40:45:28.88:406,0,29	0/0:7,0:7:21.07:0,21,820	0/0:34,0:22:13.12:0,13,512	0/0:59,0:40:47.05:0,47,859	0/1:29,0:29:99:206,0,435	0/1:40,0:40:99:439,0,569	0/0:13,0:13:4.62:0,5,320	0/0:46,0:43:99:0,120,1372	0/1:32,0:32:99:560,0,426	0/0:28,0:27:65.53:0,66,2749	0/0:19,0:19:51.17:0,51,1664	0/1:31,0:31:99:302,0,235	0/0:48,0:48:99:0,138,5957	0/0:29,0:29:78.26:0,78,3492	0/1:29,0:29:99:541,0,358	0/0:21,0:21:57.19:0,57,2005	0/1:25,0:25:99:164,0,358	0/0:26,0:25:69.23:0,69,2302	0/0:24,0:23:57.64:0,58,2032	0/0:23,0:23:69.22:0,69,1980	0/0:34,0:34:96.26:0,96,4223	0/0:23,0:23:66.22:0,66,3556	0/1:19,0:19:6.71:7,0,307	0/0:27,0:27:2.17:0,2,36	0/0:14,0:14:42.14:0,42,1565	0/0:32,0:32:88.14:0,88,2435	0/0:36,0:36:68.91:0,69,4838	0/0:6,0:6:15.05:0,15,737
chr10	33629724	.	GTAAA	G	2403.90	PASS	AB=0.853;AC=34;AF=0.850;AN=40;BaseQRankSum=0.036;DP=258;FS=7.059;HRun=0;HaplotypeScore=42.9501;InbreedingCoeff=0.3344;MQ=73.60;MQ0=1;MQRankSum=1.798;QD=13.06;ReadPosRankSum=1.726;VQSLOD=1.3257;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:17:12.04:0,12,228	./.	./.	./.	1/1:2,3:5:9.03:139,9,0	1/1:5,4:9:12.04:186,12,0	./.	1/1:20,0:20:3:28,3,0	1/1:3,3:6:9.03:139,9,0	1/1:10,2:12:6.02:93,6,0	./.	1/1:5,0:7:6.01:56,6,0	1/1:4,2:6:6.02:93,6,0	1/1:3,5:8:15.05:232,15,0	0/0:3,0:3:3.01:0,3,35	1/1:4,1:5:3.01:46,3,0	1/1:18,15:33:33.11:511,33,0	0/1:7,5:12:23.86:214,0,24	1/1:3,3:6:9.03:140,9,0	1/1:8,4:12:6.02:93,6,0	1/1:4,0:4:3.01:33,3,0	./.	0/1:6,0:6:0:0,0,0	./.	1/1:3,8:11:21.07:325,21,0	./.	1/1:14,2:16:6.02:93,6,0	1/1:3,3:6:6.02:93,6,0
chr10	33630344	.	TAAAC	T	921.43	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.836;DP=748;FS=2.901;HRun=0;HaplotypeScore=113.3028;InbreedingCoeff=0.8758;MQ=63.36;MQ0=1;MQRankSum=0.184;QD=29.72;ReadPosRankSum=2.741;VQSLOD=3.6747;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:75.21:0,75,1732	0/0:17,0:17:48.12:0,48,1067	0/0:27,0:20:51.13:0,51,1043	0/0:20,0:20:11.26:0,11,629	0/0:42,0:42:99:0,102,2311	0/0:34,0:34:87.28:0,87,2019	0/0:14,0:14:42.14:0,42,1045	0/0:32,0:32:72.21:0,72,1505	0/0:28,0:28:72.20:0,72,1559	0/0:32,0:32:81.26:0,81,1820	0/0:31,0:31:78.25:0,78,1846	0/0:18,0:18:45.15:0,45,1122	0/0:26,0:26:72.23:0,72,1670	0/0:27,0:27:69.21:0,69,1554	1/1:6,25:31:60.21:1016,60,0	0/0:34,0:34:78.25:0,78,1875	0/0:30,0:30:72.23:0,72,1730	0/0:15,0:15:35.99:0,36,781	0/0:16,0:16:33.10:0,33,776	0/0:41,0:41:99:0,114,2688	0/0:3,0:3:6.02:0,6,150	0/0:21,0:21:48.16:0,48,1165	0/0:31,0:31:72.23:0,72,1735	0/0:28,0:28:69.21:0,69,1564	0/0:36,0:36:93.29:0,93,2190	0/0:37,0:37:87.28:0,87,2001	0/0:32,0:32:75.19:0,75,1657	0/0:14,0:14:39.13:0,39,914
chr10	33630491	.	T	TC	941.92	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-6.987;DP=676;FS=3.810;HRun=2;HaplotypeScore=62.4456;InbreedingCoeff=0.9900;MQ=90.69;MQ0=0;MQRankSum=-1.544;QD=36.23;ReadPosRankSum=-0.017;VQSLOD=4.0339;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:96.23:0,96,1170	0/0:10,0:10:24.07:0,24,298	0/0:27,0:27:78.21:0,78,927	0/0:29,0:29:81.10:0,81,914	0/0:35,0:35:96.30:0,96,1190	0/0:38,0:38:99:0,114,1401	0/0:17,0:17:51.16:0,51,632	0/0:34,0:34:99:0,99,1228	0/0:20,0:20:60.19:0,60,744	0/0:19,0:19:54.17:0,54,670	0/0:22,0:22:66.18:0,66,793	0/0:15,0:15:45.12:0,45,533	0/0:28,0:28:84.22:0,84,1002	0/0:25,0:25:72.23:0,72,891	1/1:1,25:26:72.24:1037,72,0	0/0:26,0:26:78.24:0,78,956	0/0:24,0:24:69.17:0,69,815	0/0:17,0:17:51.14:0,51,617	0/0:21,0:21:57.18:0,57,707	0/0:26,0:26:69.22:0,69,855	0/0:30,0:30:90.28:0,90,1116	0/0:20,0:20:57.18:0,57,707	0/0:26,0:26:72.21:0,72,879	0/0:20,0:20:60.15:0,60,715	0/0:16,0:16:48.15:0,48,595	0/0:29,0:29:84.26:0,84,1031	0/0:36,0:36:99:0,105,1289	0/0:8,0:8:18.06:0,18,223
chr10	33630870	.	G	GAC	185.43	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=2.555;DP=464;FS=1.126;HRun=0;HaplotypeScore=131.8142;InbreedingCoeff=0.5021;MQ=57.23;MQ0=21;MQRankSum=-1.579;QD=5.79;ReadPosRankSum=-2.948;VQSLOD=2.9796;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:3.55:0,4,78	0/0:9,0:8:12.04:0,12,184	0/0:9,0:6:4.60:0,5,120	0/1:11,0:8:13.42:13,0,88	0/0:12,1:13:3:0,3,25	1/1:10,1:11:5.95:71,6,0	0/0:11,0:11:1.53:0,2,123	0/0:54,0:33:99:0,99,1347	0/0:8,0:8:0.47:0,0,1	0/0:30,0:28:81.26:0,81,1196	0/0:20,0:19:27.09:0,27,404	0/0:21,0:21:30.09:0,30,440	0/0:21,0:21:35.91:0,36,528	0/0:11,0:11:27.09:0,27,412	1/1:6,2:9:17.03:216,17,0	0/0:17,0:17:33.28:0,33,492	0/0:13,0:13:9.92:0,10,135	0/0:12,1:13:28.86:0,29,402	0/0:13,0:11:33.10:0,33,479	0/0:27,0:27:50.96:0,51,771	0/0:11,0:10:24.08:0,24,364	0/0:6,0:6:6.02:0,6,88	0/0:17,0:17:35.68:0,36,444	0/0:14,0:14:20.45:0,20,223	0/0:22,0:22:32.62:0,33,466	0/0:25,0:23:69.22:0,69,1018	0/0:17,0:15:33.09:0,33,474	0/0:11,0:11:33.06:0,33,457
chr10	33630872	.	TAGATAGAC	T	100.09	PASS	AB=1.000;AC=6;AF=0.107;AN=56;BaseQRankSum=2.265;DP=464;FS=1.133;HRun=0;HaplotypeScore=162.6074;InbreedingCoeff=0.5388;MQ=58.72;MQ0=16;MQRankSum=0.750;QD=2.27;ReadPosRankSum=-1.637;VQSLOD=2.2309;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:6.20:0,6,36	0/0:9,0:8:11.99:0,12,117	0/0:10,0:7:8.63:0,9,65	0/1:11,0:8:9.91:10,0,22	0/0:9,3:12:0.91:0,1,1	1/1:11,1:12:4.97:22,5,0	1/1:11,0:11:9:129,9,0	0/0:52,0:36:95.43:0,95,768	0/0:1,6:8:0.47:0,0,1	0/0:30,0:28:67.15:0,67,1125	0/0:20,0:19:29.72:0,30,259	0/0:21,0:21:29.75:0,30,385	0/0:22,0:22:36.13:0,36,483	0/0:11,0:11:26.56:0,27,280	0/1:10,0:9:4.49:56,0,4	0/0:18,0:18:41.06:0,41,460	0/0:13,0:13:8.68:0,9,53	0/0:13,0:14:29.36:0,29,200	0/0:12,0:11:33:0,33,506	0/0:27,0:27:50.93:0,51,628	0/0:11,0:10:23.92:0,24,286	0/0:6,0:6:8.98:0,9,73	0/0:17,0:17:33.45:0,33,465	0/0:14,0:14:18.63:0,19,227	0/0:22,0:22:30.49:0,30,575	0/0:25,0:23:63.03:0,63,1210	0/0:17,0:15:31.19:0,31,365	0/0:11,0:11:32.67:0,33,243
chr10	33630874	.	G	GAC	168.47	PASS	AB=0.892;AC=8;AF=0.143;AN=56;BaseQRankSum=4.261;DP=470;FS=0.000;HRun=0;HaplotypeScore=135.1176;InbreedingCoeff=0.2761;MQ=60.00;MQ0=12;MQRankSum=-1.266;QD=1.94;ReadPosRankSum=-3.051;VQSLOD=1.7957;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:8.93:0,9,93	0/0:9,0:8:12.04:0,12,182	0/0:11,0:8:11.03:0,11,131	0/1:11,0:8:20.16:20,0,81	0/0:8,4:12:0:0,0,0	1/1:9,5:14:9:123,9,0	0/1:5,5:10:50.81:51,0,74	0/0:50,0:38:96.22:0,96,1321	0/1:7,1:8:0:0,0,0	0/0:29,0:27:69.12:0,69,970	0/0:20,0:19:30.09:0,30,426	0/0:21,0:21:32.85:0,33,286	0/0:23,0:23:35.91:0,36,515	0/0:11,0:11:27.09:0,27,412	0/1:10,1:10:2.08:48,0,2	0/1:18,0:18:15.53:16,0,492	0/1:13,2:15:39.61:40,0,116	0/0:14,0:14:27.52:0,28,346	0/0:11,0:11:33.11:0,33,486	0/0:28,0:28:50.96:0,51,758	0/0:11,0:10:24.08:0,24,359	0/0:6,0:6:9.03:0,9,132	0/0:17,0:17:34.08:0,34,282	0/0:15,0:15:23.82:0,24,194	0/0:23,0:23:32.61:0,33,468	0/0:25,0:23:63.14:0,63,872	0/0:18,0:16:36.02:0,36,458	0/0:11,0:11:33.11:0,33,503
chr10	33630878	.	GACAGAC	G	969.05	PASS	AB=0.980;AC=23;AF=0.411;AN=56;BaseQRankSum=1.077;DP=471;FS=0.578;HRun=0;HaplotypeScore=152.2589;InbreedingCoeff=-0.4588;MQ=63.38;MQ0=7;MQRankSum=-0.618;QD=2.83;ReadPosRankSum=-4.103;VQSLOD=1.4504;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:18:6.08:90,6,0	0/0:9,0:8:12.04:0,12,318	0/1:15,0:10:4.45:4,0,184	0/1:12,0:9:11.26:11,0,146	0/1:10,0:10:10.77:11,0,27	0/1:14,0:14:9.85:10,0,61	0/1:8,0:8:15.92:16,0,57	0/0:46,0:40:99:0,107,2451	1/1:8,0:8:0.07:0,0,0	0/1:27,0:25:83.40:83,0,1489	0/1:21,0:20:81.78:82,0,693	0/1:13,7:20:41.04:41,0,657	0/1:23,0:24:99:101,0,881	0/1:12,0:12:19.82:20,0,685	0/1:10,0:9:6.63:7,0,44	0/1:18,0:18:99:188,0,673	0/0:15,0:15:11.78:0,12,90	0/1:14,0:14:93.44:93,0,431	0/1:13,0:13:57.75:58,0,720	0/1:30,0:30:52.67:53,0,1192	0/1:12,0:11:65.56:66,0,430	0/0:6,0:6:9.03:0,9,245	0/1:18,0:18:12.90:13,0,807	0/1:15,0:15:99:126,0,396	0/0:26,0:26:45.37:0,45,1301	0/1:22,0:20:49.51:50,0,1164	0/0:16,0:14:4.41:0,4,678	0/0:11,0:11:8.81:0,9,778
chr10	33630882	.	GAC	G	659.63	PASS	AB=0.902;AC=18;AF=0.321;AN=56;BaseQRankSum=3.846;DP=464;FS=2.111;HRun=0;HaplotypeScore=127.3083;InbreedingCoeff=-0.3011;MQ=63.96;MQ0=4;MQRankSum=-2.130;QD=2.29;ReadPosRankSum=-4.417;VQSLOD=1.1785;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:9,7:16:5.99:64,6,0	0/0:8,1:8:12.04:0,12,230	0/0:14,0:10:5.67:0,6,155	0/0:13,0:9:4.96:0,5,106	0/1:9,0:9:0.35:0,0,13	0/1:15,0:15:27.80:28,0,35	0/0:8,1:9:8.89:0,9,62	0/0:43,0:40:99:0,114,1992	0/1:8,0:8:0:0,0,0	0/1:25,3:26:92.10:92,0,1029	0/1:14,7:20:55.64:56,0,485	0/1:19,1:20:12.89:13,0,474	0/1:19,6:25:32.76:33,0,671	0/0:11,1:12:5.14:0,5,488	0/0:8,0:8:1.98:0,2,10	0/1:12,4:16:98.46:98,0,458	0/1:15,0:15:8.02:8,0,40	0/1:9,3:12:81.02:81,0,316	0/1:10,3:13:97.60:98,0,529	0/1:21,3:30:99:103,0,804	0/1:10,1:10:24.53:25,0,288	0/0:5,1:6:9.03:0,9,173	0/0:18,0:18:13.40:0,13,593	0/1:11,4:15:50.15:50,0,275	0/0:23,0:26:45.38:0,45,866	0/1:18,0:20:51.62:52,0,752	0/0:16,0:15:29.95:0,30,514	0/1:12,0:12:9.09:9,0,561
chr10	33630886	.	TAG	T	30.19	PASS	AB=0.859;AC=5;AF=0.089;AN=56;BaseQRankSum=5.644;DP=463;FS=11.158;HRun=0;HaplotypeScore=132.0553;InbreedingCoeff=0.0848;MQ=64.19;MQ0=5;MQRankSum=-3.503;QD=0.53;ReadPosRankSum=-2.545;VQSLOD=1.1285;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:18:4.79:0,5,27	0/0:9,0:8:12.04:0,12,232	0/0:15,0:10:17.74:0,18,247	0/0:13,0:9:5.18:0,5,122	0/1:7,2:9:10.51:36,0,11	0/1:13,3:16:27.91:49,0,28	0/0:7,0:7:8.95:0,9,132	0/0:38,0:35:99:0,102,1838	0/1:7,0:7:0:0,0,0	0/0:26,0:24:55.56:0,56,1158	0/0:24,0:23:39.70:0,40,645	0/0:22,0:22:35.12:0,35,572	0/0:25,0:25:42.73:0,43,748	0/0:11,0:11:27.09:0,27,521	0/1:3,4:7:6.14:32,0,6	0/0:16,0:16:32.06:0,32,500	0/1:18,0:18:21.91:22,0,95	0/0:14,0:14:18.66:0,19,389	0/0:13,0:13:19:0,19,543	0/0:31,0:31:51:0,51,983	0/0:10,0:9:14.40:0,14,305	0/0:5,0:5:12.04:0,12,223	0/0:17,0:17:18.21:0,18,638	0/0:15,0:15:16.82:0,17,342	0/0:27,0:27:48.16:0,48,916	0/0:21,0:19:56.49:0,56,926	0/0:16,0:14:33.09:0,33,601	0/0:12,0:12:4.37:0,4,603
chr10	33630894	.	C	CAT	7444.58	PASS	AB=0.747;AC=35;AF=0.648;AN=54;BaseQRankSum=-7.687;DP=454;FS=5.500;HRun=0;HaplotypeScore=101.9065;InbreedingCoeff=0.0847;MQ=67.25;MQ0=2;MQRankSum=0.984;QD=19.49;ReadPosRankSum=0.408;VQSLOD=4.8513;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,3:17:3.01:49,3,0	1/1:4,5:9:11.91:195,12,0	1/1:17,0:12:1.25:3,1,0	0/0:14,0:10:0.89:0,1,54	0/1:9,0:9:7.36:7,0,11	0/1:16,0:16:18.48:49,0,18	0/1:7,0:7:12.08:19,0,12	1/1:14,20:36:1.85:916,2,0	./.	1/1:11,14:24:11.49:678,11,0	1/1:7,13:19:36.12:584,36,0	0/0:22,0:22:35.93:0,36,428	1/1:10,14:24:5.49:596,5,0	0/1:3,9:12:9.56:362,0,10	1/1:7,0:8:11.02:79,11,0	0/1:6,7:14:13.77:274,0,14	0/1:16,0:18:0.60:1,0,31	1/1:6,8:14:25.16:357,25,0	0/1:5,7:12:12.58:310,0,13	1/1:13,19:31:11.53:694,12,0	1/1:3,6:8:12.04:195,12,0	1/1:2,4:6:9.03:146,9,0	0/0:16,0:17:38.95:0,39,454	0/0:13,0:14:20.88:0,21,221	0/1:13,15:30:25.15:633,0,25	0/1:8,10:17:3.55:448,0,4	0/1:6,9:14:3.54:449,0,4	0/1:3,9:12:73.84:402,0,74
chr10	33632804	.	T	TA	4872.76	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-4.476;DP=592;FS=1.664;HRun=3;HaplotypeScore=79.7888;InbreedingCoeff=0.9942;MQ=95.64;MQ0=0;MQRankSum=-5.159;QD=35.83;ReadPosRankSum=1.292;VQSLOD=5.4284;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,18:21:60.05:754,60,0	0/0:8,0:8:24.07:0,24,288	0/0:27,0:27:74.76:0,75,834	0/0:29,0:29:81.20:0,81,944	1/1:4,30:34:87.05:1111,87,0	1/1:1,20:21:60.20:835,60,0	1/1:1,7:8:24.04:314,24,0	0/0:29,0:29:84.22:0,84,963	1/1:4,21:25:60.20:839,60,0	0/0:20,0:20:54.17:0,54,648	0/0:22,0:22:66.19:0,66,782	0/0:22,0:22:60.17:0,60,708	0/0:21,0:21:57.16:0,57,674	0/0:20,0:20:57.16:0,57,674	0/0:29,0:29:81.21:0,81,932	0/0:19,1:20:18.09:0,18,612	1/1:2,25:27:75.18:1020,75,0	0/0:14,0:14:42.10:0,42,489	0/0:21,0:21:54.13:0,54,608	0/0:25,0:25:75.22:0,75,890	0/0:13,0:13:30.09:0,30,360	0/0:25,0:25:72.17:0,72,836	0/0:27,0:27:78.16:0,78,904	0/0:11,0:11:33.10:0,33,396	0/0:25,0:25:72.20:0,72,841	0/0:22,0:22:66.18:0,66,773	0/0:21,0:21:60.17:0,60,707	0/0:5,0:5:15.05:0,15,180
chr10	33632865	.	T	TAA	4630.75	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=7.137;DP=584;FS=1.330;HRun=7;HaplotypeScore=120.3109;InbreedingCoeff=0.9962;MQ=83.69;MQ0=0;MQRankSum=-3.878;QD=37.05;ReadPosRankSum=1.016;VQSLOD=3.7219;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,18:23:57.09:840,57,0	0/0:9,0:9:27.08:0,27,315	0/0:19,0:18:39.09:0,39,449	0/0:21,0:22:54.10:0,54,596	1/1:6,25:31:78.22:1247,78,0	1/1:1,12:14:39.12:615,39,0	1/1:1,11:13:36.12:571,36,0	0/0:34,0:35:87.21:0,87,988	1/1:6,10:16:33.11:541,33,0	0/0:30,0:30:87.25:0,87,1013	0/0:29,0:29:81.22:0,81,933	0/0:17,0:17:51.14:0,51,584	0/0:23,0:23:66.18:0,66,758	0/0:18,0:18:48.13:0,48,559	0/0:27,0:27:72.20:0,72,839	0/0:15,0:15:42.12:0,42,489	1/1:5,22:28:51.17:817,51,0	0/0:12,0:12:33.07:0,33,370	0/0:23,0:23:54.14:0,54,629	0/0:27,0:27:81.24:0,81,943	0/0:10,0:10:27.07:0,27,315	0/0:20,0:20:54.15:0,54,629	0/0:25,0:25:72.19:0,72,824	0/0:11,0:11:33.08:0,33,372	0/0:26,0:26:78.23:0,78,909	0/0:22,0:22:66.20:0,66,768	0/0:32,0:32:90.25:0,90,1036	0/0:7,0:7:15.04:0,15,175
chr10	33633569	.	TTG	T	2549.99	PASS	AB=0.726;AC=42;AF=0.778;AN=54;BaseQRankSum=1.700;DP=625;FS=2.002;HRun=0;HaplotypeScore=131.9082;InbreedingCoeff=0.5414;MQ=63.62;MQ0=11;MQRankSum=-2.348;QD=5.53;ReadPosRankSum=1.063;VQSLOD=3.0839;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,0:24:18.04:128,18,0	0/1:5,4:9:35.93:57,0,36	0/0:41,0:21:6.02:0,6,88	./.	1/1:12,0:26:26.91:125,27,0	1/1:7,0:22:36.93:181,37,0	1/1:7,0:12:5.68:28,6,0	1/1:18,0:18:2.52:14,3,0	1/1:14,0:30:31.25:153,31,0	1/1:16,10:26:29.61:282,30,0	1/1:15,8:23:12.46:119,12,0	0/0:18,0:18:14.96:0,15,120	1/1:12,7:20:17.78:166,18,0	1/1:14,11:25:6.01:66,6,0	0/0:20,0:30:15:0,15,131	1/1:19,5:24:6.01:66,6,0	1/1:15,0:22:11.09:56,11,0	0/1:13,6:19:10.90:116,0,11	1/1:13,2:15:6.02:66,6,0	1/1:16,7:23:17.90:168,18,0	1/1:7,13:20:4.08:211,4,0	1/1:8,10:18:17.74:163,18,0	0/0:17,0:18:2.63:0,3,13	0/0:20,0:21:9.46:0,9,91	1/1:21,12:33:18.04:198,18,0	1/1:18,5:23:13.27:153,13,0	1/1:17,9:25:8.76:98,9,0	1/1:0,3:3:9.02:99,9,0
chr10	33633918	.	GA	G	3487.11	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=11.147;DP=674;FS=7.956;HRun=9;HaplotypeScore=69.4575;InbreedingCoeff=0.9908;MQ=81.92;MQ0=0;MQRankSum=0.114;QD=22.21;ReadPosRankSum=1.930;VQSLOD=4.5641;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,22:27:57.03:522,57,0	0/0:19,0:19:48.14:0,48,554	0/0:20,0:20:15.66:0,16,263	0/0:21,0:20:32.93:0,33,335	1/1:1,34:35:90.03:824,90,0	1/1:9,33:42:93.04:851,93,0	1/1:1,10:11:30.02:275,30,0	0/0:28,0:29:66.20:0,66,762	1/1:2,17:19:48.02:439,48,0	0/0:31,0:31:75.22:0,75,863	0/0:25,0:25:54.16:0,54,623	0/0:25,0:25:72.20:0,72,821	0/0:18,0:18:45.13:0,45,516	0/0:26,0:26:69.20:0,69,796	0/0:23,0:23:63.19:0,63,727	0/0:23,0:23:60.18:0,60,693	1/1:2,21:23:63.03:577,63,0	0/0:14,0:14:36.09:0,36,403	0/0:26,0:26:69.21:0,69,796	0/0:35,0:35:88.26:0,88,1026	0/0:21,0:21:42.12:0,42,484	0/0:27,0:27:69.20:0,69,796	0/0:17,0:17:45.13:0,45,519	0/0:33,0:33:93.28:0,93,1073	0/0:31,0:31:87.24:0,87,992	0/0:17,0:17:48.14:0,48,551	0/0:30,1:31:56.74:0,57,877	0/0:5,0:5:12.04:0,12,138
chr10	33637636	.	A	AT	5356.46	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-10.980;DP=584;FS=11.317;HRun=0;HaplotypeScore=55.6586;InbreedingCoeff=0.9945;MQ=74.47;MQ0=0;MQRankSum=-2.759;QD=42.18;ReadPosRankSum=0.235;VQSLOD=4.4803;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:78.24:0,78,1073	0/0:12,0:12:36.11:0,36,487	0/0:17,0:17:50.69:0,51,627	0/0:23,0:20:15.35:0,15,569	1/1:2,19:21:50.99:801,51,0	1/1:0,24:24:69.24:1103,69,0	1/1:0,31:31:78.27:1246,78,0	0/0:33,0:33:99:0,99,1370	1/1:0,19:19:48.16:767,48,0	0/0:19,0:19:54.18:0,54,755	0/0:13,0:13:36.11:0,36,488	0/0:23,0:23:66.22:0,66,920	0/0:20,0:20:60.20:0,60,839	0/0:16,0:16:48.14:0,48,653	0/0:27,0:27:81.26:0,81,1117	0/0:24,0:24:72.23:0,72,992	1/1:1,31:32:90.31:1438,90,0	0/0:17,0:17:45.15:0,45,625	0/0:17,0:17:51.16:0,51,694	0/0:20,0:20:60.20:0,60,839	0/0:6,0:6:18.06:0,18,251	0/0:11,0:11:33.11:0,33,461	0/0:11,0:11:33.11:0,33,462	0/0:22,0:22:66.20:0,66,904	0/0:24,0:24:72.24:0,72,1006	0/0:25,0:25:72.24:0,72,1006	0/0:37,0:37:99:0,111,1552	0/0:12,0:12:36.12:0,36,503
chr10	33638338	.	AGG	A	12022.04	PASS	AB=1.000;AC=43;AF=0.768;AN=56;BaseQRankSum=-10.217;DP=693;FS=3.419;HRun=11;HaplotypeScore=117.9342;InbreedingCoeff=0.8835;MQ=66.30;MQ0=4;MQRankSum=-2.380;QD=22.77;ReadPosRankSum=2.572;VQSLOD=4.3388;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:30:20.58:0,21,144	1/1:1,13:14:30.05:319,30,0	0/0:19,0:15:24.57:0,25,300	0/1:13,0:11:7.84:8,0,106	1/1:2,22:24:54.94:565,55,0	1/1:3,20:23:57.14:607,57,0	1/1:5,19:24:54.12:575,54,0	1/1:15,19:34:44.93:453,45,0	1/1:2,36:35:84.21:894,84,0	1/1:7,19:26:57.12:605,57,0	1/1:6,17:23:45.09:474,45,0	0/0:8,0:25:43.29:0,43,182	1/1:4,29:33:87.21:926,87,0	1/1:5,32:36:80.88:917,81,0	0/0:7,0:39:80.15:0,80,278	1/1:3,27:30:78.19:830,78,0	1/1:1,13:14:4.56:320,5,0	1/1:3,8:11:18.01:192,18,0	1/1:6,10:16:26.98:342,27,0	1/1:2,16:18:42.07:446,42,0	1/1:9,32:41:87.20:926,87,0	1/1:5,18:23:48.10:510,48,0	0/0:9,0:15:15.09:0,15,69	0/0:9,0:37:67.72:0,68,248	1/1:1,20:21:47.66:510,48,0	1/1:8,14:22:42.07:444,42,0	1/1:4,28:32:89.96:937,90,0	1/1:2,8:10:21.05:224,21,0
chr10	33638348	.	GGA	G	2674.99	PASS	AB=0.993;AC=30;AF=0.536;AN=56;BaseQRankSum=12.068;DP=666;FS=22.350;HRun=0;HaplotypeScore=137.9387;InbreedingCoeff=0.0802;MQ=69.49;MQ0=4;MQRankSum=-2.507;QD=5.41;ReadPosRankSum=10.918;VQSLOD=0.5046;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:55.13:0,55,326	1/1:14,0:14:4.44:104,4,0	0/0:20,0:16:44.89:0,45,532	0/0:14,0:12:29.58:0,30,324	0/1:24,0:24:17.39:107,0,17	1/1:22,0:22:0.10:97,0,0	0/1:24,0:24:66.31:114,0,66	0/1:29,1:30:14.28:14,0,278	1/1:38,0:35:30.91:218,31,0	0/1:23,0:23:63.59:136,0,64	1/1:18,1:19:0.94:144,1,0	0/0:28,0:28:68.22:0,68,446	1/1:32,1:33:33.91:311,34,0	1/1:36,0:35:7.54:266,8,0	0/0:42,0:42:99:0,109,692	1/1:30,0:30:24.49:227,24,0	0/1:17,0:17:57.78:60,0,58	0/1:10,0:10:22.67:30,0,23	0/1:17,1:18:52.98:53,0,135	0/1:18,0:18:41.49:137,0,41	0/1:35,0:35:0.59:150,0,1	0/1:21,0:21:25.13:166,0,25	0/0:12,0:12:23.92:0,24,172	0/0:32,0:32:81.13:0,81,444	0/1:25,0:25:60.36:144,0,60	0/1:17,0:17:47.49:66,0,47	1/1:31,1:32:34.31:256,34,0	1/1:8,0:8:16.39:55,16,0
chr10	33638775	.	TC	T	4572.70	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=11.868;DP=674;FS=6.439;HRun=3;HaplotypeScore=67.1303;InbreedingCoeff=0.9956;MQ=72.84;MQ0=1;MQRankSum=-0.861;QD=33.62;ReadPosRankSum=1.281;VQSLOD=5.3611;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,114,1608	0/0:13,0:13:39.12:0,39,542	0/0:28,0:23:40.17:0,40,718	0/0:14,0:14:22.43:0,22,349	1/1:0,23:23:66.21:817,66,0	1/1:0,31:31:78.25:967,78,0	1/1:0,30:30:87.27:1079,87,0	0/0:38,0:37:99:0,99,1359	1/1:0,27:27:72.23:892,72,0	0/0:34,0:34:99:0,99,1391	0/0:15,0:15:45.13:0,45,628	0/0:27,0:27:75.25:0,75,1078	0/0:23,0:23:69.21:0,69,974	0/0:28,0:28:84.25:0,84,1186	0/0:32,0:32:96.32:0,96,1380	0/0:25,0:25:69.23:0,69,993	1/1:0,25:25:66.21:818,66,0	0/0:17,0:17:42.10:0,42,575	0/0:16,0:15:36.12:0,36,517	0/0:29,0:29:81.27:0,81,1166	0/0:22,0:22:66.21:0,66,920	0/0:27,0:27:69.22:0,69,972	0/0:16,0:16:48.16:0,48,690	0/0:22,0:22:63.20:0,63,879	0/0:28,0:28:75.22:0,75,1040	0/0:16,0:16:48.16:0,48,689	0/0:20,0:20:60.18:0,60,841	0/0:5,0:5:15.05:0,15,216
chr10	33640098	.	T	TCAAGTTCTA	12585.40	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=3.970;DP=696;FS=10.913;HRun=0;HaplotypeScore=189.3003;InbreedingCoeff=0.9990;MQ=85.43;MQ0=0;MQRankSum=-15.894;QD=91.20;ReadPosRankSum=-3.050;VQSLOD=3.3156;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:72.25:0,72,2129	0/0:12,0:12:36.12:0,36,1069	0/0:21,0:21:59.69:0,60,1566	0/0:27,0:27:74.98:0,75,1881	1/1:10,27:41:96.33:4003,96,0	1/1:17,16:35:81.28:3233,81,0	1/1:14,12:27:60.20:2301,60,0	0/0:33,0:33:96.28:0,96,2590	1/1:12,9:22:48.16:2100,48,0	0/0:31,0:31:78.26:0,78,2190	0/0:27,0:27:81.28:0,81,2427	0/0:18,0:18:54.18:0,54,1450	0/0:28,0:28:84.27:0,84,2452	0/0:25,0:25:72.25:0,72,2171	0/0:27,0:27:75.26:0,75,2234	0/0:24,0:24:72.23:0,72,2029	1/1:6,5:12:21.07:948,21,0	0/0:13,0:13:39.13:0,39,1160	0/0:25,0:25:69.24:0,69,1929	0/0:36,0:36:99:0,102,2993	0/0:24,0:24:66.21:0,66,1828	0/0:26,0:26:72.25:0,72,2108	0/0:23,0:23:66.23:0,66,1900	0/0:13,0:13:39.13:0,39,1143	0/0:31,0:31:87.29:0,87,2584	0/0:19,0:19:57.20:0,57,1702	0/0:32,0:32:93.28:0,93,2724	0/0:19,0:19:57.20:0,57,1549
chr10	33640524	.	TA	T	10155.86	PASS	AB=0.741;AC=48;AF=0.857;AN=56;BaseQRankSum=1.434;DP=645;FS=0.532;HRun=11;HaplotypeScore=91.9627;InbreedingCoeff=0.6923;MQ=75.18;MQ0=1;MQRankSum=-4.057;QD=17.39;ReadPosRankSum=3.942;VQSLOD=5.4621;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,13:15:26.98:298,27,0	0/1:1,8:9:14.03:105,0,14	0/0:23,0:20:36.39:0,36,280	0/1:18,1:18:2.74:3,0,142	1/1:4,14:19:35.74:295,36,0	1/1:9,24:33:74.80:605,75,0	1/1:8,9:17:26.72:271,27,0	1/1:6,12:18:32.79:262,33,0	1/1:2,18:20:56.89:462,57,0	1/1:8,32:40:34.95:691,35,0	1/1:4,28:33:82.90:668,83,0	1/1:3,17:20:40.77:325,41,0	1/1:5,27:33:71.84:594,72,0	1/1:4,25:29:65.90:542,66,0	0/0:34,0:35:80.99:0,81,822	1/1:5,23:29:64.96:523,65,0	1/1:5,13:18:38.90:311,39,0	1/1:3,18:21:42.21:407,42,0	1/1:1,12:13:35.94:293,36,0	1/1:6,31:37:86.63:683,87,0	1/1:6,14:20:29.96:246,30,0	1/1:4,22:27:61.95:499,62,0	1/1:3,16:19:26.78:370,27,0	1/1:5,18:23:35.95:296,36,0	1/1:2,20:22:44.94:369,45,0	1/1:1,17:19:52.95:420,53,0	1/1:3,26:30:76.93:619,77,0	0/0:2,0:2:0:0,0,0
chr10	33640552	.	C	CCAACAA	7008.83	PASS	AB=0.595;AC=9;AF=0.161;AN=56;BaseQRankSum=-4.459;DP=711;FS=0.000;HRun=0;HaplotypeScore=176.4148;InbreedingCoeff=0.8772;MQ=67.99;MQ0=1;MQRankSum=-11.578;QD=55.63;ReadPosRankSum=-0.607;VQSLOD=4.8054;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:39.22:0,39,1058	0/0:14,0:14:33.11:0,33,674	0/0:30,0:26:27.89:0,28,505	0/0:21,0:18:29.97:0,30,578	1/1:5,21:31:78.20:2215,78,0	1/1:9,16:27:48.16:1545,48,0	1/1:6,12:18:36.12:1147,36,0	0/0:27,0:27:57.15:0,57,996	0/1:7,15:22:9.94:1448,0,10	0/0:45,0:45:99:0,114,2253	0/0:29,0:29:66.20:0,66,1370	0/0:16,0:16:39.12:0,39,775	0/0:32,0:32:63.16:0,63,1286	0/0:25,0:25:51.18:0,51,1076	0/0:32,0:32:81.28:0,81,1731	0/0:25,0:25:57.18:0,57,1179	1/1:13,12:28:22.63:654,23,0	0/0:20,0:20:45.15:0,45,958	0/0:16,0:16:21.06:0,21,351	0/0:35,0:35:84.27:0,84,1735	0/0:14,0:14:23.96:0,24,473	0/0:31,0:31:78.25:0,78,1628	0/0:30,0:30:69.22:0,69,1386	0/0:21,0:21:48.16:0,48,1023	0/0:29,0:29:69.23:0,69,1403	0/0:28,0:28:81.23:0,81,1655	0/0:31,0:31:69.24:0,69,1459	0/0:10,0:10:21.07:0,21,448
chr10	33641652	.	TGG	T	439.61	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-6.696;DP=546;FS=0.988;HRun=11;HaplotypeScore=142.4231;InbreedingCoeff=0.7970;MQ=64.66;MQ0=0;MQRankSum=0.987;QD=19.98;ReadPosRankSum=1.968;VQSLOD=1.9587;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:86.75:0,87,717	0/0:10,0:10:29.95:0,30,248	0/0:9,0:9:11.62:0,12,88	0/0:8,0:7:15.01:0,15,185	0/0:20,0:20:20.38:0,20,135	0/0:24,0:24:29.85:0,30,264	0/0:14,0:14:17.99:0,18,174	0/0:26,0:26:48.65:0,49,383	0/0:18,0:18:27.03:0,27,264	0/0:23,0:23:50.84:0,51,413	0/0:25,0:25:59.94:0,60,506	0/0:23,0:23:53.96:0,54,459	0/0:22,0:22:47.80:0,48,385	0/0:18,0:18:44.87:0,45,365	1/1:3,18:22:45.07:534,45,0	0/0:20,0:20:53.96:0,54,460	0/0:27,0:27:3:0,3,38	0/0:8,0:8:20.98:0,21,176	0/0:20,0:19:50.91:0,51,419	0/0:31,0:31:65.83:0,66,538	0/0:23,0:23:47.96:0,48,405	0/0:17,0:17:44.93:0,45,372	0/0:20,0:20:47.91:0,48,409	0/0:15,0:15:38.97:0,39,329	0/0:23,0:23:62.93:0,63,561	0/0:16,0:16:38.95:0,39,325	0/0:17,0:17:38.96:0,39,328	0/0:9,0:9:18:0,18,159
chr10	33641659	.	G	GT	3512.55	PASS	AB=1.000;AC=38;AF=0.679;AN=56;BaseQRankSum=7.561;DP=497;FS=1.457;HRun=0;HaplotypeScore=120.5955;InbreedingCoeff=0.7633;MQ=63.64;MQ0=0;MQRankSum=-2.647;QD=9.12;ReadPosRankSum=7.921;VQSLOD=3.3657;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:34,0:34:57.84:344,58,0	1/1:11,0:11:25.89:142,26,0	0/0:7,0:7:17.48:0,17,159	0/0:10,0:9:17.87:0,18,197	0/0:16,0:16:21.40:0,21,134	0/0:16,0:16:32.50:0,33,229	0/0:15,0:15:18.54:0,19,127	1/1:25,1:26:7.03:314,7,0	0/0:13,0:13:22.33:0,22,147	1/1:19,0:19:45.44:190,45,0	1/1:23,0:23:4.58:132,5,0	0/1:20,0:20:23.73:111,0,24	1/1:17,1:19:29.54:185,30,0	1/1:15,4:19:5.50:154,6,0	0/0:19,0:19:52.68:0,53,308	1/1:19,0:19:12.45:158,12,0	0/0:16,0:16:5.95:0,6,44	1/1:8,0:8:17.57:83,18,0	1/1:21,0:21:43.74:263,44,0	1/1:23,5:28:51.87:253,52,0	1/1:18,0:18:33.45:170,33,0	1/1:17,0:18:35.13:185,35,0	1/1:18,3:21:29.38:158,29,0	1/1:12,0:15:34.08:139,34,0	1/1:27,0:27:19.71:231,20,0	1/1:12,1:13:30.86:125,31,0	1/1:17,0:17:27.74:148,28,0	0/1:9,0:9:11.37:28,0,11
chr10	33641660	.	G	GT	8084.54	PASS	AB=0.929;AC=41;AF=0.732;AN=56;BaseQRankSum=2.109;DP=501;FS=1.531;HRun=0;HaplotypeScore=106.0727;InbreedingCoeff=0.8714;MQ=62.67;MQ0=0;MQRankSum=-0.827;QD=20.06;ReadPosRankSum=8.052;VQSLOD=6.4652;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,26:35:76.62:715,77,0	1/1:2,9:11:30.81:260,31,0	0/0:6,0:6:11.46:0,11,102	0/0:9,0:9:20.74:0,21,209	0/0:18,0:18:24.57:0,25,154	0/0:15,0:15:29.60:0,30,187	0/0:15,0:15:18.49:0,18,124	1/1:10,17:27:44.77:429,45,0	0/1:12,1:13:8.45:8,0,137	1/1:2,17:19:25.71:467,26,0	1/1:5,17:23:58.06:536,58,0	1/1:5,15:20:35.10:473,35,0	1/1:6,10:19:33.19:350,33,0	1/1:6,13:19:44.23:398,44,0	0/0:19,0:19:52.30:0,52,293	1/1:1,17:18:53.03:478,53,0	0/0:15,0:15:2.97:0,3,20	1/1:1,6:7:19.82:175,20,0	1/1:5,16:21:24.86:436,25,0	1/1:6,22:28:21.52:493,22,0	1/1:5,15:20:22.35:412,22,0	1/1:5,14:19:14.52:366,15,0	1/1:8,14:22:19.85:416,20,0	1/1:3,12:15:38.95:340,39,0	1/1:9,19:28:69.30:534,69,0	1/1:1,12:13:38.86:358,39,0	1/1:3,14:17:25.11:314,25,0	1/1:4,5:9:17.24:123,17,0
chr10	33641663	.	G	GA	11221.36	PASS	AB=0.900;AC=49;AF=0.875;AN=56;BaseQRankSum=-5.032;DP=494;FS=0.000;HRun=1;HaplotypeScore=98.2498;InbreedingCoeff=0.7376;MQ=63.76;MQ0=0;MQRankSum=-2.611;QD=24.88;ReadPosRankSum=0.058;VQSLOD=4.5676;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,25:35:87.09:890,87,0	1/1:3,8:11:32.08:316,32,0	0/1:8,0:8:19.94:20,0,54	0/0:10,0:8:19.90:0,20,146	1/1:1,1:16:32.76:268,33,0	1/1:12,0:13:32.93:301,33,0	1/1:0,1:12:12:120,12,0	1/1:15,11:26:72.10:717,72,0	1/1:13,0:13:34.89:299,35,0	1/1:3,15:18:51.07:539,51,0	1/1:1,17:21:55.34:542,55,0	1/1:3,15:18:48.56:496,49,0	1/1:6,10:17:47.39:454,47,0	1/1:6,12:18:42.10:458,42,0	0/0:20,0:20:52.64:0,53,303	1/1:2,16:18:54.12:573,54,0	0/0:0,0:13:0:0,0,0	1/1:1,6:7:19.85:183,20,0	1/1:10,14:24:66.07:656,66,0	1/1:9,20:29:77.63:713,78,0	1/1:4,15:19:57.04:578,57,0	1/1:6,13:19:54.30:526,54,0	1/1:10,12:22:50.16:480,50,0	1/1:3,12:15:42.06:422,42,0	1/1:9,19:28:77.96:736,78,0	1/1:5,10:15:38.99:383,39,0	1/1:2,13:18:42.15:384,42,0	1/1:0,6:10:18:167,18,0
chr10	33642185	.	G	GTTAT	43921.54	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-10.633;DP=741;FS=0.866;HRun=0;HaplotypeScore=103.7272;InbreedingCoeff=0.9990;MQ=80.30;MQ0=0;MQRankSum=-11.021;QD=68.10;ReadPosRankSum=4.514;VQSLOD=7.1352;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,31:34:81.28:2183,81,0	1/1:2,9:11:30.10:768,30,0	0/0:39,0:39:99:0,108,2009	0/0:20,0:19:48.16:0,48,860	1/1:3,23:26:66.23:1674,66,0	1/1:6,33:40:99:2754,105,0	1/1:6,17:23:60.21:1585,60,0	1/1:11,27:38:99:2664,105,0	1/1:1,15:16:39.13:1044,39,0	1/1:3,22:25:68.90:1678,69,0	1/1:3,20:24:66.23:1629,66,0	1/1:2,30:32:93.32:2445,93,0	1/1:3,25:28:72.25:1918,72,0	1/1:3,18:21:63.22:1656,63,0	0/0:37,0:37:99:0,108,2035	1/1:4,23:27:63.22:1697,63,0	1/1:2,19:21:45.15:1215,45,0	1/1:1,19:20:51.18:1376,51,0	1/1:6,15:21:57.19:1362,57,0	1/1:4,33:37:99:2870,108,0	1/1:5,22:27:63.22:1658,63,0	1/1:2,24:26:69.24:1749,69,0	1/1:0,23:25:69.71:1812,70,0	1/1:4,17:22:41.85:1119,42,0	1/1:2,23:25:66.23:1730,66,0	1/1:5,24:29:84.29:2229,84,0	1/1:3,32:36:93.32:2483,93,0	1/1:1,9:10:24.08:622,24,0
chr10	33643323	.	G	GA	10054.42	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-4.668;DP=670;FS=1.273;HRun=9;HaplotypeScore=78.0707;InbreedingCoeff=0.9640;MQ=73.17;MQ0=2;MQRankSum=-2.426;QD=18.48;ReadPosRankSum=-0.624;VQSLOD=4.8507;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,106,912	1/1:1,11:12:30.08:332,30,0	0/0:11,0:10:14.98:0,15,127	0/0:12,0:13:31.82:0,32,253	1/1:10,2:36:69.10:393,69,0	1/1:3,4:39:80.04:454,80,0	1/1:7,3:30:60.12:353,60,0	1/1:10,16:26:22.05:461,22,0	1/1:3,1:23:42.74:218,43,0	1/1:2,25:27:46.07:708,46,0	1/1:4,11:15:12.81:339,13,0	0/0:24,0:24:59.10:0,59,519	1/1:4,34:38:67.20:970,67,0	1/1:4,23:27:37.12:638,37,0	1/1:9,0:34:34.34:270,34,0	1/1:6,19:27:59.83:626,60,0	1/1:4,1:26:33.94:276,34,0	1/1:1,13:15:35.93:379,36,0	1/1:3,19:22:51.14:564,51,0	1/1:8,18:27:30.89:539,31,0	1/1:2,7:9:15.04:166,15,0	1/1:9,14:23:36.06:385,36,0	0/0:17,1:18:6.91:0,7,234	0/0:20,0:20:53.98:0,54,469	1/1:2,16:18:16.34:406,16,0	1/1:9,16:25:19.06:439,19,0	1/1:5,22:28:65.99:701,66,0	1/1:2,13:15:19.07:437,19,0
chr10	33643447	.	G	GA	530.94	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-3.093;DP=730;FS=1.736;HRun=9;HaplotypeScore=72.8346;InbreedingCoeff=0.9409;MQ=77.91;MQ0=0;MQRankSum=-2.352;QD=21.24;ReadPosRankSum=-0.438;VQSLOD=4.1060;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,108,937	0/0:17,0:17:35.98:0,36,313	0/0:24,0:23:10.60:0,11,221	0/0:18,0:18:28.90:0,29,237	0/0:35,0:35:98.97:0,99,859	0/0:26,0:26:65.94:0,66,568	0/0:23,0:23:65.99:0,66,573	0/0:29,0:29:71.90:0,72,618	0/0:24,0:24:62.98:0,63,547	0/0:31,0:32:64.99:0,65,553	0/0:12,1:13:32.98:0,33,287	0/0:43,0:43:99:0,110,942	0/0:41,0:41:99:0,108,933	0/0:21,0:21:62.94:0,63,539	1/1:2,21:25:59.83:626,60,0	0/0:26,0:26:68.19:0,68,576	0/0:27,0:27:71.98:0,72,625	0/0:22,0:22:53.95:0,54,464	0/0:24,0:24:50.95:0,51,443	0/0:36,0:36:95.94:0,96,826	0/0:25,0:25:68.97:0,69,597	0/0:23,0:23:62.96:0,63,542	0/0:23,0:23:59.97:0,60,521	0/0:19,0:19:53.98:0,54,467	0/0:26,0:25:71.98:0,72,625	0/0:27,0:27:53.91:0,54,461	0/0:33,0:33:83.97:0,84,729	0/0:7,0:7:14:0,14,128
chr10	33646440	.	GA	G	2384.10	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=9.950;DP=754;FS=7.556;HRun=10;HaplotypeScore=72.4548;InbreedingCoeff=0.9565;MQ=73.90;MQ0=0;MQRankSum=-1.542;QD=17.40;ReadPosRankSum=1.820;VQSLOD=4.1247;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,3:48:65.65:0,66,1160	0/0:15,0:15:10.06:0,10,339	0/0:27,2:27:13.10:0,13,391	0/0:10,0:9:9.02:0,9,97	1/1:4,24:28:59.96:521,60,0	1/1:6,13:19:10.78:261,11,0	1/1:7,13:20:15.40:289,15,0	0/0:35,2:37:58.10:0,58,842	1/1:2,26:28:71.98:625,72,0	0/0:29,0:29:49.33:0,49,764	0/0:21,1:22:48.13:0,48,531	0/0:30,1:31:55.14:0,55,816	0/0:30,0:30:84.20:0,84,911	0/0:25,0:25:65.52:0,66,688	0/0:23,0:23:63.17:0,63,697	0/0:27,0:28:75.02:0,75,802	1/1:6,36:42:98.97:860,99,0	0/0:17,0:17:42.09:0,42,453	0/0:23,1:24:34.09:0,34,596	0/0:37,1:38:67.19:0,67,962	0/0:29,0:29:78.20:0,78,854	0/0:29,1:30:55.12:0,55,801	0/0:17,0:19:47.79:0,48,486	0/0:20,0:20:51.14:0,51,564	0/0:26,1:27:43.12:0,43,695	0/0:35,0:35:81.20:0,81,877	0/0:42,0:41:99:0,105,1136	0/0:9,0:9:21.06:0,21,232
chr10	33647178	.	G	GA	804.49	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-2.036;DP=747;FS=9.654;HRun=1;HaplotypeScore=101.2732;InbreedingCoeff=0.9958;MQ=83.42;MQ0=0;MQRankSum=-2.541;QD=36.57;ReadPosRankSum=0.010;VQSLOD=2.8980;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:69.12:0,69,857	0/0:14,0:14:39.13:0,39,506	0/0:27,0:27:75.09:0,75,913	0/0:23,0:23:69.20:0,69,871	0/0:48,0:48:99:0,138,1774	0/0:29,0:29:84.25:0,84,1062	0/0:27,0:27:81.26:0,81,1052	0/0:49,0:49:99:0,144,1842	0/0:17,0:17:48.16:0,48,623	0/0:36,0:36:99:0,105,1318	0/0:18,0:18:54.18:0,54,701	0/0:27,0:27:81.24:0,81,1025	0/0:33,0:33:93.29:0,93,1192	0/0:29,0:29:87.27:0,87,1114	1/1:1,21:22:60.20:899,60,0	0/0:30,0:30:81.24:0,81,1015	0/0:18,0:18:51.16:0,51,649	0/0:9,0:9:21.07:0,21,272	0/0:17,0:17:48.13:0,48,595	0/0:32,0:32:93.29:0,93,1193	0/0:12,0:12:36.12:0,36,467	0/0:31,0:31:87.27:0,87,1114	0/0:35,0:35:99:0,105,1363	0/0:20,0:20:54.16:0,54,685	0/0:42,0:42:99:0,123,1555	0/0:31,0:31:87.28:0,87,1129	0/0:33,0:33:96.27:0,96,1203	0/0:15,0:15:45.15:0,45,584
chr10	33647768	.	G	GACAC	4941.35	PASS	AB=0.747;AC=49;AF=0.907;AN=54;BaseQRankSum=-2.042;DP=648;FS=1.722;HRun=0;HaplotypeScore=136.3938;InbreedingCoeff=-0.0671;MQ=65.43;MQ0=15;MQRankSum=0.732;QD=7.98;ReadPosRankSum=-0.224;VQSLOD=4.2335;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:36,0:36:20.78:320,21,0	1/1:7,0:6:6:87,6,0	./.	0/1:30,0:21:0:0,0,0	0/1:16,0:28:15.89:16,0,38	1/1:11,5:17:3.01:71,3,0	1/1:30,1:30:20.87:270,21,0	1/1:22,0:21:9.01:115,9,0	1/1:9,1:19:8.50:95,8,0	1/1:12,6:21:28.83:377,29,0	0/1:6,1:15:14:83,0,14	1/1:20,0:25:3.01:57,3,0	1/1:12,6:25:5.80:141,6,0	1/1:12,6:20:12.04:251,12,0	1/1:33,0:33:5.88:104,6,0	1/1:10,1:21:8.16:94,8,0	0/1:16,10:29:15.35:267,0,15	1/1:5,5:11:11.06:173,11,0	1/1:17,0:16:9.02:127,9,0	1/1:7,16:27:7.73:679,8,0	1/1:28,0:28:11.20:501,11,0	0/1:11,6:17:37.61:132,0,38	1/1:20,0:20:15.03:236,15,0	1/1:29,0:28:5.61:112,6,0	1/1:18,10:32:8.44:153,8,0	1/1:15,3:20:10.37:163,10,0	1/1:16,7:29:15.26:250,15,0	1/1:4,0:4:3.01:70,3,0
chr10	33653585	.	TGAC	T	834.05	PASS	AB=0.991;AC=18;AF=0.346;AN=52;BaseQRankSum=-3.442;DP=636;FS=9.755;HRun=0;HaplotypeScore=137.0478;InbreedingCoeff=-0.0293;MQ=53.29;MQ0=24;MQRankSum=-2.459;QD=2.36;ReadPosRankSum=-1.542;VQSLOD=1.7581;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:29,2:30:1.98:17,2,0	0/1:8,0:8:3.90:4,0,175	0/0:33,0:17:22.77:0,23,289	0/0:48,0:32:34.36:0,34,363	0/0:9,0:9:0:0,0,0	./.	0/0:20,0:20:2.88:0,3,19	0/1:37,0:30:78.90:79,0,99	0/0:32,2:33:5.64:0,6,129	0/1:16,0:14:61.17:61,0,117	0/1:8,0:7:25.38:60,0,25	1/1:6,13:18:3.01:37,3,0	0/0:28,0:28:4:0,4,452	0/0:21,0:21:42.29:0,42,439	1/1:8,14:22:29.99:404,30,0	0/0:21,0:21:38.87:0,39,394	0/1:35,0:35:19.80:20,0,255	0/1:22,0:22:22.65:23,0,350	0/1:30,0:22:19.96:20,0,292	0/0:17,0:16:8.09:0,8,292	0/1:67,0:58:99:121,0,491	0/0:15,0:14:2.11:0,2,234	./.	1/1:19,2:20:2.87:32,3,0	0/1:16,0:15:3.90:4,0,173	0/0:18,0:17:8.17:0,8,309	0/1:19,2:21:99:101,0,392	0/0:4,0:4:8.99:0,9,83
chr10	33653653	.	G	GTGATGATGA	8252.57	PASS	AB=1.000;AC=43;AF=0.860;AN=50;BaseQRankSum=-2.345;DP=482;FS=0.000;HRun=0;HaplotypeScore=135.0858;InbreedingCoeff=0.4064;MQ=38.15;MQ0=35;MQRankSum=-0.652;QD=24.63;ReadPosRankSum=4.049;VQSLOD=3.9839;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,0:5:2.94:18,3,0	1/1:3,0:4:6.02:113,6,0	0/0:70,0:15:5.98:0,6,65	0/0:67,0:15:9.01:0,9,145	0/1:8,0:8:0:1,0,0	1/1:1,0:1:3.01:97,3,0	1/1:22,0:21:0.10:1,0,0	1/1:23,0:23:18.05:474,18,0	1/1:22,0:22:7.61:298,8,0	1/1:7,0:14:30.10:560,30,0	1/1:4,0:7:6.02:112,6,0	./.	1/1:11,7:19:15.05:596,15,0	1/1:9,13:23:41.89:1891,42,0	1/1:8,0:11:14.84:423,15,0	1/1:7,0:16:16.88:342,17,0	0/1:14,0:14:20.88:201,0,21	1/1:6,0:8:3.01:57,3,0	1/1:13,3:18:21.03:482,21,0	1/1:8,3:11:3.48:125,3,0	1/1:28,12:40:4.25:139,4,0	1/1:6,6:12:15.05:541,15,0	./.	0/1:4,0:3:0:0,0,0	1/1:4,0:7:9.03:169,9,0	1/1:7,7:15:24.07:795,24,0	1/1:11,9:19:18.06:817,18,0	./.
chr10	33653686	.	A	AT	465.81	PASS	AB=0.933;AC=23;AF=0.442;AN=52;BaseQRankSum=6.866;DP=232;FS=35.605;HRun=0;HaplotypeScore=85.2444;InbreedingCoeff=0.2078;MQ=57.62;MQ0=3;MQRankSum=-7.600;QD=3.30;ReadPosRankSum=1.108;VQSLOD=1.4780;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,3:2:3.01:30,3,0	1/1:3,0:3:3.01:40,3,0	0/0:17,0:13:36.12:0,36,489	0/0:21,0:13:35.25:0,35,386	0/1:5,0:5:0:0,0,0	0/0:2,0:2:3.01:0,3,42	0/1:6,0:5:0.01:0,0,1	0/0:11,0:11:23.66:0,24,289	0/0:6,0:6:6:0,6,84	0/1:11,2:12:60.82:71,0,61	1/1:5,0:5:6.49:85,6,0	1/1:0,1:10:6.02:67,6,0	0/1:6,0:6:5.78:6,0,33	0/1:18,1:19:14.78:51,0,15	0/0:5,1:5:12.46:0,12,64	1/1:9,0:9:9.80:23,10,0	0/1:2,5:7:58.38:58,0,73	0/0:4,0:4:3.90:0,4,80	0/0:17,0:15:24.46:0,24,393	0/0:2,0:2:2.88:0,3,15	0/1:27,0:20:19.40:19,0,75	0/1:9,0:9:16.68:17,0,29	./.	0/0:1,2:2:0:0,0,0	1/1:4,0:4:9.03:121,9,0	0/1:7,0:7:8.69:9,0,69	1/1:6,0:6:9.33:23,9,0	./.
chr10	33653694	.	TG	T	412.02	PASS	AC=14;AF=0.304;AN=46;BaseQRankSum=1.940;DP=222;FS=11.777;HRun=3;HaplotypeScore=83.1543;InbreedingCoeff=0.7331;MQ=58.34;MQ0=7;MQRankSum=-2.647;QD=9.58;ReadPosRankSum=0.913;VQSLOD=0.2604;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,2:2:3:28,3,0	0/0:3,0:3:6.01:0,6,58	0/0:17,0:14:33.10:0,33,441	0/0:16,0:10:13.41:0,13,307	./.	1/1:0,2:2:6.01:65,6,0	1/1:2,6:6:6.47:55,6,0	0/0:10,0:9:27.09:0,27,366	1/1:0,6:6:17.62:165,18,0	0/0:11,0:10:17.97:0,18,241	0/0:4,0:4:3:0,3,41	1/1:12,0:10:5.74:38,6,0	0/0:7,0:7:15.05:0,15,207	0/0:19,0:19:44.85:0,45,607	1/1:2,3:4:6.02:71,6,0	0/0:9,0:8:17.80:0,18,247	1/1:2,5:7:13.85:146,14,0	0/0:3,0:3:9.03:0,9,124	0/0:17,0:15:42.10:0,42,556	./.	0/0:27,0:20:4.97:0,5,80	0/0:9,0:9:10.94:0,11,129	./.	0/0:2,1:2:0:0,0,0	./.	0/0:8,0:8:10.03:0,10,162	0/0:6,0:6:18.06:0,18,248	./.
chr10	33655989	.	A	ACT	705.56	PASS	AB=0.936;AC=16;AF=0.308;AN=52;BaseQRankSum=-2.264;DP=560;FS=1.731;HRun=0;HaplotypeScore=130.2933;InbreedingCoeff=-0.0611;MQ=51.24;MQ0=32;MQRankSum=2.586;QD=2.13;ReadPosRankSum=0.289;VQSLOD=2.5713;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:31:30.75:0,31,307	0/0:5,0:5:4.52:0,5,24	./.	./.	0/0:8,10:18:8.93:0,9,65	1/1:22,0:21:17.94:234,18,0	1/1:24,0:19:26.55:269,27,0	0/0:26,0:21:16.18:0,16,305	0/1:6,8:13:8.54:9,0,20	0/1:27,0:26:58.73:59,0,290	0/0:19,0:19:28.84:0,29,330	0/1:18,0:16:11.85:12,0,131	0/1:21,0:17:11.63:12,0,93	0/1:18,0:18:4.62:5,0,33	0/0:13,0:11:17.86:0,18,137	0/1:20,0:20:21.91:22,0,280	0/1:12,22:31:48.33:202,0,48	0/0:25,0:24:1.70:0,2,128	0/0:12,0:12:10.40:0,10,163	0/0:22,0:22:6.82:0,7,63	0/1:37,0:30:3.90:4,0,391	0/0:19,0:19:24.31:0,24,269	0/1:20,0:19:2.39:2,0,124	0/1:26,0:24:17.38:17,0,145	0/0:13,0:13:4.57:0,5,49	0/1:27,0:26:1.51:2,0,240	0/1:23,0:23:6.38:6,0,103	0/0:8,0:7:20.91:0,21,163
chr10	33655993	.	ACT	A	4700.59	PASS	AB=0.797;AC=43;AF=0.827;AN=52;BaseQRankSum=-0.043;DP=549;FS=5.981;HRun=0;HaplotypeScore=109.5436;InbreedingCoeff=-0.1894;MQ=51.65;MQ0=30;MQRankSum=3.468;QD=8.70;ReadPosRankSum=-1.054;VQSLOD=4.1291;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:37,0:33:32.46:310,32,0	1/1:0,4:4:3.01:46,3,0	./.	./.	1/1:19,0:18:11.88:99,12,0	1/1:22,0:21:29.86:255,30,0	1/1:22,0:17:35.52:272,36,0	0/1:26,0:21:24.49:196,0,24	1/1:15,0:13:11.80:90,12,0	0/1:6,21:26:1.27:412,0,1	1/1:18,1:19:18.42:303,18,0	0/1:20,0:18:11.56:12,0,158	1/1:20,0:16:14.39:208,14,0	1/1:4,13:17:11.91:147,12,0	1/1:11,0:9:14.81:107,15,0	1/1:19,1:20:19.10:283,19,0	1/1:32,0:30:17.99:137,18,0	0/1:5,19:24:17:201,0,17	0/1:10,0:10:28.95:62,0,29	1/1:3,19:22:8.91:135,9,0	1/1:38,0:31:26.77:349,27,0	1/1:18,0:18:35.17:291,35,0	0/1:19,0:18:11.49:11,0,121	0/1:25,0:23:67.86:68,0,116	0/1:1,13:14:11.98:39,0,12	1/1:4,24:27:57.20:509,57,0	0/1:3,19:22:15.36:41,0,15	1/1:8,0:7:7.25:116,7,0
chr10	33655995	.	TCACA	T	3053.21	PASS	AB=0.950;AC=27;AF=0.500;AN=54;BaseQRankSum=-5.906;DP=558;FS=14.738;HRun=0;HaplotypeScore=129.0806;InbreedingCoeff=0.4105;MQ=51.66;MQ0=31;MQRankSum=2.957;QD=8.98;ReadPosRankSum=-1.573;VQSLOD=1.8654;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:32:24.15:0,24,270	1/1:4,0:4:2.99:24,3,0	./.	0/0:5,0:1:2.94:0,3,18	0/1:18,0:17:0:0,0,0	0/0:24,0:23:17.76:0,18,219	0/0:21,0:16:2.03:0,2,5	0/1:13,14:24:0.79:225,0,1	0/0:17,0:14:5.41:0,5,27	1/1:27,0:26:37.46:411,37,0	0/1:19,0:19:5.73:280,0,6	0/0:21,0:19:18.88:0,19,297	1/1:20,0:16:13.98:186,14,0	1/1:17,0:17:11.52:74,12,0	0/0:12,0:10:6.01:0,6,63	1/1:19,1:20:31.08:385,31,0	0/0:34,0:31:17.86:0,18,206	0/1:26,0:26:18.91:137,0,19	1/1:6,4:10:0.38:108,0,0	0/1:21,0:21:24.76:34,0,25	0/1:40,0:33:0.75:385,0,1	1/1:18,0:18:6.62:295,7,0	0/0:19,0:18:13.44:0,13,199	0/0:25,0:23:8.42:0,8,114	1/1:14,0:14:3:25,3,0	1/1:28,0:27:17.17:387,17,0	0/1:22,0:22:18.16:37,0,18	1/1:8,0:7:18.04:231,18,0
chr10	33656018	.	C	CACACAT	575.54	PASS	AB=1.000;AC=10;AF=0.179;AN=56;BaseQRankSum=1.896;DP=593;FS=0.000;HRun=0;HaplotypeScore=156.1625;InbreedingCoeff=0.4122;MQ=55.70;MQ0=29;MQRankSum=-0.290;QD=3.31;ReadPosRankSum=1.915;VQSLOD=2.5791;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:26:8.06:8,0,186	0/0:4,0:4:6.01:0,6,76	0/0:24,0:10:22.27:0,22,216	0/0:17,0:12:13.90:0,14,178	0/0:15,0:14:14.41:0,14,112	0/1:21,0:20:37.54:38,0,111	0/1:23,0:18:72.40:72,0,120	0/0:35,0:34:54.35:0,54,469	0/0:16,0:13:13.72:0,14,89	0/0:24,0:22:44.89:0,45,417	0/0:16,0:16:28.23:0,28,237	1/1:8,11:17:3.01:96,3,0	0/0:16,0:14:32.93:0,33,276	0/0:15,0:15:5.95:0,6,42	0/0:17,0:16:26.49:0,26,216	0/0:22,0:22:48.48:0,48,471	0/1:31,0:28:65.17:65,0,71	0/0:25,0:25:26.85:0,27,240	0/0:15,0:13:11.92:0,12,112	0/0:24,0:24:26.71:0,27,212	0/0:35,0:30:45.63:0,46,392	0/0:22,0:22:44.62:0,45,366	1/1:24,0:22:15:159,15,0	1/1:26,0:24:23.84:288,24,0	0/0:15,0:15:15:0,15,152	0/0:29,0:28:45.52:0,46,439	0/0:24,0:24:16.87:0,17,149	0/0:8,0:7:20.95:0,21,171
chr10	33656020	.	C	CACATAC	574.87	PASS	AB=1.000;AC=10;AF=0.179;AN=56;BaseQRankSum=1.955;DP=594;FS=0.000;HRun=0;HaplotypeScore=155.8109;InbreedingCoeff=0.4117;MQ=56.00;MQ0=29;MQRankSum=-0.543;QD=3.30;ReadPosRankSum=1.867;VQSLOD=2.3632;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:26:8.06:8,0,186	0/0:4,0:4:6.01:0,6,76	0/0:25,0:11:22.27:0,22,216	0/0:18,0:13:13.90:0,14,178	0/0:15,0:14:14.41:0,14,112	0/1:21,0:20:37.54:38,0,111	0/1:26,0:21:72.40:72,0,120	0/0:36,0:35:54.35:0,54,469	0/0:16,0:13:13.72:0,14,89	0/0:22,0:20:44.89:0,45,417	0/0:16,0:16:28.23:0,28,237	1/1:19,0:17:3.01:96,3,0	0/0:15,0:13:32.93:0,33,276	0/0:14,0:14:5.95:0,6,42	0/0:19,0:18:26.49:0,26,216	0/0:20,0:21:48.48:0,48,471	0/1:30,0:27:65.17:65,0,71	0/0:26,0:26:23.84:0,24,210	0/0:16,0:14:11.92:0,12,112	0/0:26,0:26:26.71:0,27,212	0/0:34,0:28:45.63:0,46,392	0/0:20,0:20:44.62:0,45,366	1/1:13,9:22:14.74:158,15,0	1/1:24,0:22:23.84:289,24,0	0/0:16,0:16:15:0,15,152	0/0:29,0:28:45.52:0,46,439	0/0:24,0:24:16.87:0,17,149	0/0:8,0:7:20.95:0,21,171
chr10	33657517	.	AC	A	2273.17	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.501;DP=719;FS=0.000;HRun=5;HaplotypeScore=83.8324;InbreedingCoeff=0.9993;MQ=91.54;MQ0=0;MQRankSum=-3.789;QD=30.31;ReadPosRankSum=2.675;VQSLOD=4.1304;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:96.32:0,96,1310	0/0:14,0:14:42.14:0,42,575	0/0:25,0:25:69.23:0,69,935	0/0:35,0:36:86.74:0,87,1112	0/0:28,0:28:84.27:0,84,1132	0/0:31,0:31:93.28:0,93,1229	0/0:17,0:17:48.15:0,48,641	0/0:27,0:27:75.25:0,75,1026	0/0:25,0:25:72.24:0,72,985	0/0:26,0:26:78.23:0,78,1040	0/0:19,0:19:57.17:0,57,747	1/1:1,27:28:81.23:919,81,0	0/0:30,0:30:84.28:0,84,1148	0/0:25,0:25:75.24:0,75,1012	0/0:29,0:29:84.28:0,84,1149	0/0:29,0:29:81.26:0,81,1094	0/0:27,0:27:69.23:0,69,944	0/0:19,0:19:54.18:0,54,738	0/0:19,0:19:57.19:0,57,779	0/0:23,0:23:63.17:0,63,814	0/0:35,0:35:99:0,99,1350	0/0:35,0:35:99:0,105,1419	1/1:1,27:28:78.22:885,78,0	1/1:1,18:19:54.15:613,54,0	0/0:18,0:18:54.17:0,54,723	0/0:27,0:27:78.26:0,78,1055	0/0:35,0:34:99:0,99,1337	0/0:8,0:8:24.08:0,24,328
chr10	33659720	.	CCT	C	277.57	PASS	AB=0.938;AC=12;AF=0.462;AN=26;BaseQRankSum=-0.091;DP=79;FS=0.000;HRun=0;HaplotypeScore=60.0089;InbreedingCoeff=0.2795;MQ=24.35;MQ0=8;MQRankSum=1.448;QD=6.17;ReadPosRankSum=-0.905;VQSLOD=2.3393;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,1:8:17.84:153,18,0	./.	./.	./.	0/0:10,0:10:1.41:0,1,2	1/1:4,0:2:2.39:9,2,0	0/0:2,0:2:0.47:0,0,1	./.	1/1:4,0:3:4.53:15,5,0	./.	./.	./.	./.	./.	./.	./.	0/1:6,1:7:53.77:54,0,77	0/1:5,0:4:1.88:2,0,2	./.	./.	1/1:7,1:6:8.35:63,8,0	./.	0/0:4,0:2:0.47:0,0,1	1/1:4,2:6:0.61:76,1,0	./.	0/0:5,0:2:3.01:0,3,45	0/0:1,0:1:3.01:0,3,61	0/0:3,0:1:3:0,3,27
chr10	33659722	.	T	TTC	564.31	PASS	AB=0.803;AC=14;AF=0.500;AN=28;BaseQRankSum=1.854;DP=93;FS=0.000;HRun=0;HaplotypeScore=70.2757;InbreedingCoeff=0.0961;MQ=24.32;MQ0=11;MQRankSum=1.395;QD=10.26;ReadPosRankSum=-0.865;VQSLOD=2.9391;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,6:8:20.55:258,21,0	./.	./.	./.	0/0:10,0:10:0:0,0,0	0/0:3,0:2:0.89:0,1,2	0/0:3,0:3:0.89:0,1,2	./.	1/1:4,0:4:3.30:20,3,0	./.	./.	./.	./.	./.	1/1:3,0:2:3.01:50,3,0	./.	0/1:7,0:9:25.42:51,0,25	0/1:1,4:4:1.97:89,0,2	1/1:2,0:2:2.52:47,3,0	./.	1/1:2,5:6:11.44:91,11,0	./.	./.	0/1:7,0:7:3.59:16,0,4	./.	0/0:5,0:2:3.01:0,3,38	0/1:2,0:2:31.82:41,0,32	0/0:3,0:1:3:0,3,27
chr10	33659734	.	CCT	C	726.47	PASS	AB=0.845;AC=23;AF=0.639;AN=36;BaseQRankSum=0.452;DP=125;FS=0.000;HRun=0;HaplotypeScore=61.8760;InbreedingCoeff=0.1274;MQ=24.36;MQ0=15;MQRankSum=0.510;QD=8.07;ReadPosRankSum=-0.144;VQSLOD=2.5791;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:14,1:12:20.90:196,21,0	./.	./.	./.	./.	0/1:5,0:3:0.09:0,0,1	0/0:3,0:3:3.01:0,3,61	./.	1/1:5,0:4:0.92:5,1,0	1/1:0,2:2:6.02:83,6,0	./.	./.	1/1:0,2:2:6.01:63,6,0	1/1:0,3:3:8.96:88,9,0	0/1:8,1:5:3.25:3,0,22	1/1:1,1:1:3.01:36,3,0	0/1:10,2:11:45.54:46,0,74	1/1:5,1:5:2.56:78,3,0	0/1:3,1:3:31.52:32,0,38	./.	1/1:9,0:6:8.40:68,8,0	./.	./.	1/1:4,4:7:0.35:42,0,0	0/0:1,0:1:3.01:0,3,37	0/1:4,4:5:48.90:103,0,49	0/0:2,0:2:2.97:0,3,60	0/0:4,0:1:3.01:0,3,33
chr10	33659736	.	T	TTCTC	1575.69	PASS	AB=0.949;AC=22;AF=0.611;AN=36;BaseQRankSum=0.135;DP=107;FS=0.000;HRun=0;HaplotypeScore=62.9629;InbreedingCoeff=0.1228;MQ=23.39;MQ0=15;MQRankSum=1.390;QD=19.22;ReadPosRankSum=0.463;VQSLOD=3.1748;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,5:12:22.24:409,22,0	./.	./.	./.	./.	0/0:2,0:1:1.82:0,2,5	0/0:2,0:2:3.01:0,3,52	./.	1/1:3,0:2:2.50:9,2,0	1/1:3,0:2:6.02:82,6,0	./.	./.	1/1:2,0:2:6.02:125,6,0	1/1:3,0:3:9.03:196,9,0	0/1:8,0:5:25.57:32,0,26	1/1:2,0:1:3.01:60,3,0	0/1:8,0:9:44.88:73,0,45	1/1:1,4:5:12.04:257,12,0	1/1:4,0:3:6.02:117,6,0	./.	1/1:5,4:6:5.04:188,5,0	./.	./.	0/1:7,0:7:24.07:28,0,24	0/0:1,0:1:3.01:0,3,52	0/1:8,0:5:40.54:121,0,41	0/0:2,0:2:1.08:0,1,49	0/0:4,0:1:2.96:0,3,19
chr10	33659746	.	CCT	C	738.58	PASS	AB=0.870;AC=29;AF=0.690;AN=42;BaseQRankSum=-0.105;DP=144;FS=0.000;HRun=0;HaplotypeScore=72.1700;InbreedingCoeff=-0.1038;MQ=22.99;MQ0=19;MQRankSum=-0.080;QD=6.05;ReadPosRankSum=-1.441;VQSLOD=2.5329;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:14,2:12:27.25:102,0,27	./.	./.	./.	1/1:1,4:4:8.99:79,9,0	1/1:1,5:6:17.98:170,18,0	0/1:2,5:7:75.59:76,0,94	1/1:9,0:1:0.89:2,1,0	1/1:2,3:4:8.99:83,9,0	1/1:4,0:3:8.40:40,8,0	./.	1/1:1,0:1:2.22:7,2,0	1/1:3,0:2:5.14:24,5,0	1/1:3,0:3:8.91:68,9,0	1/1:10,0:5:3.26:15,3,0	1/1:3,0:2:5.77:31,6,0	0/1:10,0:9:14.28:14,0,161	0/1:6,1:6:35.85:36,0,44	0/1:3,0:2:0.13:4,0,0	./.	0/1:7,1:6:4.69:5,0,32	./.	./.	0/1:5,4:8:18.87:56,0,19	0/0:1,0:1:3.01:0,3,61	0/1:7,1:5:30.56:31,0,50	0/1:2,0:2:23.69:24,0,55	0/0:4,0:1:3.01:0,3,37
chr10	33659748	.	T	TTC	2065.48	PASS	AB=0.912;AC=31;AF=0.705;AN=44;BaseQRankSum=0.757;DP=178;FS=0.000;HRun=0;HaplotypeScore=89.0498;InbreedingCoeff=-0.1355;MQ=23.67;MQ0=19;MQRankSum=-2.245;QD=13.59;ReadPosRankSum=-1.506;VQSLOD=2.8767;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:14,2:12:11.86:252,0,12	./.	./.	./.	1/1:5,0:4:8.77:58,9,0	1/1:7,0:6:8.10:96,8,0	0/1:8,0:8:52.97:53,0,55	1/1:10,1:4:12.04:199,12,0	1/1:6,0:5:8.78:60,9,0	1/1:2,4:3:9.03:149,9,0	./.	0/0:1,0:1:2.84:0,3,14	1/1:3,2:4:9.03:143,9,0	1/1:3,3:6:7.90:181,8,0	0/1:7,1:5:18.10:18,0,30	1/1:4,2:5:9.03:138,9,0	0/1:10,1:10:34.16:34,0,150	0/1:5,0:6:9.33:48,0,9	1/1:3,1:3:6.02:99,6,0	./.	1/1:9,0:7:13.79:138,14,0	1/1:3,1:2:6.02:88,6,0	./.	0/1:8,1:8:21.06:23,0,21	0/1:4,0:4:35.96:79,0,36	0/1:10,3:9:13.78:320,0,14	0/1:3,0:3:26.89:27,0,29	0/0:5,0:2:5.69:0,6,49
chr10	33659761	.	CT	C	482.36	PASS	AB=0.949;AC=20;AF=0.417;AN=48;BaseQRankSum=-1.221;DP=240;FS=0.000;HRun=2;HaplotypeScore=92.9613;InbreedingCoeff=0.1327;MQ=22.04;MQ0=26;MQRankSum=1.105;QD=3.71;ReadPosRankSum=-0.142;VQSLOD=0.1166;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:16,1:13:22.52:0,23,262	./.	./.	0/1:36,0:1:0:0,0,0	1/1:1,4:4:8.89:98,9,0	1/1:2,5:6:17.53:178,18,0	0/1:2,6:8:71.54:105,0,72	0/0:10,0:5:11.33:0,11,65	1/1:3,3:5:8.30:97,8,0	0/0:6,0:3:5.82:0,6,28	./.	0/0:1,0:1:2.96:0,3,19	0/1:6,0:4:0.85:1,0,6	0/1:8,0:8:3.16:13,0,3	0/0:14,0:8:7.16:0,7,53	0/1:8,0:6:18.55:19,0,35	0/1:10,1:10:15.92:16,0,163	0/0:7,0:6:11.53:0,12,143	0/0:8,0:6:11.35:0,11,85	1/1:2,0:2:2.04:6,2,0	0/1:10,0:7:26.92:27,0,113	1/1:6,0:4:2.88:15,3,0	./.	0/0:9,0:8:5.56:0,6,107	0/1:7,0:7:11.54:15,0,12	0/0:14,0:9:14.93:0,15,125	0/1:4,0:4:4.42:4,0,47	0/1:6,0:3:10.92:34,0,11
chr10	33659762	.	T	TTC	2299.10	PASS	AB=0.893;AC=37;AF=0.771;AN=48;BaseQRankSum=-0.328;DP=257;FS=0.000;HRun=0;HaplotypeScore=96.9615;InbreedingCoeff=-0.2381;MQ=22.24;MQ0=26;MQRankSum=-1.174;QD=11.97;ReadPosRankSum=-0.673;VQSLOD=3.2440;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:16,1:13:99:126,0,107	./.	./.	./.	1/1:5,0:4:8.83:61,9,0	1/1:6,0:6:3.98:97,4,0	0/1:8,0:8:49.48:49,0,58	1/1:6,5:6:18.06:297,18,0	1/1:8,0:7:10.22:68,10,0	1/1:1,5:3:11.91:160,12,0	./.	1/1:3,0:3:6.01:63,6,0	1/1:3,3:4:9.02:112,9,0	1/1:3,6:9:20.29:206,20,0	0/1:4,0:7:16.44:16,0,39	1/1:5,3:6:11.63:145,12,0	0/1:9,0:11:56.36:76,0,56	0/1:5,1:6:44.83:45,0,66	1/1:7,2:7:16.87:235,17,0	1/1:3,0:3:3:26,3,0	0/1:7,3:7:16.15:16,0,47	1/1:3,4:4:5.38:42,5,0	0/0:5,0:2:1.25:0,1,3	0/1:9,0:8:30.58:31,0,88	1/1:4,3:7:1.97:69,2,0	0/1:11,4:9:13.74:299,0,14	0/1:4,1:5:27.24:106,0,27	1/1:3,2:4:6.48:86,6,0
chr10	33659774	.	CCT	C	1125.45	PASS	AB=0.879;AC=35;AF=0.673;AN=52;BaseQRankSum=0.866;DP=291;FS=4.273;HRun=0;HaplotypeScore=97.6485;InbreedingCoeff=0.0611;MQ=21.59;MQ0=29;MQRankSum=-0.629;QD=6.12;ReadPosRankSum=4.688;VQSLOD=2.8282;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:12,3:12:83.68:84,0,149	./.	./.	0/0:49,0:1:2.98:0,3,22	1/1:4,1:4:6.47:53,6,0	1/1:7,0:6:14.51:135,15,0	0/1:8,0:8:20.49:20,0,63	0/0:12,1:9:1.97:0,2,67	1/1:9,0:7:10.49:77,10,0	1/1:7,0:4:2.29:56,2,0	1/1:2,1:1:0.47:1,0,0	1/1:4,0:4:5.59:35,6,0	1/1:6,1:5:1.35:53,1,0	1/1:8,1:9:16.08:99,16,0	0/1:18,1:9:61.55:62,0,62	0/1:7,2:7:4.96:54,0,5	0/1:9,1:9:40.80:41,0,58	0/0:7,0:7:16.85:0,17,177	1/1:8,2:9:15.25:123,15,0	1/1:1,1:2:3.01:32,3,0	0/0:10,0:7:7.64:0,8,76	1/1:6,1:4:5.98:55,6,0	0/1:6,0:3:0:0,0,0	0/1:7,2:9:9.90:10,0,73	1/1:3,3:6:10.43:67,10,0	0/1:11,6:10:40.61:119,0,41	0/1:5,1:5:28.80:29,0,38	1/1:5,1:4:8.82:69,9,0
chr10	33659782	.	CTCTCTT	C	2215.53	PASS	AB=0.974;AC=43;AF=0.796;AN=54;BaseQRankSum=0.977;DP=331;FS=6.021;HRun=0;HaplotypeScore=113.5383;InbreedingCoeff=-0.1385;MQ=22.29;MQ0=27;MQRankSum=0.044;QD=9.08;ReadPosRankSum=-0.022;VQSLOD=1.4655;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:11:7.83:66,8,0	1/1:1,0:1:2.94:18,3,0	./.	0/0:54,0:1:2.92:0,3,17	1/1:2,3:4:5.89:121,6,0	0/1:9,4:12:58.95:428,0,59	1/1:4,4:8:8.63:84,9,0	0/1:16,0:9:15.94:16,0,66	1/1:9,2:9:7.48:169,7,0	0/1:12,0:8:42.12:114,0,42	1/1:2,0:1:2.74:12,3,0	1/1:1,3:4:11.93:176,12,0	1/1:9,0:7:11.27:58,11,0	1/1:12,0:10:13.68:109,14,0	0/1:21,0:10:2.70:3,0,169	1/1:10,0:9:6.21:66,6,0	0/1:12,0:9:10.45:21,0,10	0/1:8,0:8:2.43:37,0,2	1/1:10,0:9:0.52:165,1,0	1/1:3,0:3:5.69:30,6,0	1/1:8,0:7:2.48:17,2,0	1/1:7,0:5:11.83:97,12,0	1/1:3,4:3:2.92:17,3,0	0/1:10,0:9:20.16:61,0,20	1/1:9,0:9:13.52:138,14,0	0/1:17,0:12:98.18:181,0,98	1/1:6,0:4:5.29:86,5,0	0/1:7,0:5:23.06:63,0,23
chr10	33659786	.	CTT	C	2561	PASS	AB=0.880;AC=44;AF=0.815;AN=54;BaseQRankSum=2.025;DP=352;FS=9.451;HRun=3;HaplotypeScore=113.9244;InbreedingCoeff=0.0634;MQ=22.47;MQ0=28;MQRankSum=0.322;QD=10.67;ReadPosRankSum=-0.508;VQSLOD=-0.3856;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:16,0:11:15.48:57,0,15	1/1:4,0:3:8.95:73,9,0	./.	0/0:58,0:1:2.92:0,3,17	1/1:5,0:4:5.71:34,6,0	0/1:13,0:12:8.86:148,0,9	1/1:9,0:9:8.81:53,9,0	1/1:10,4:8:17.98:206,18,0	1/1:10,0:8:10.97:78,11,0	1/1:7,6:9:21.45:241,21,0	1/1:3,2:4:6.65:35,7,0	1/1:4,0:4:10.90:71,11,0	1/1:7,4:9:22.25:169,22,0	1/1:7,5:10:19.76:134,20,0	0/0:18,0:10:2.16:0,2,95	1/1:4,7:10:19.24:234,19,0	0/1:12,0:10:15.99:32,0,16	0/1:5,3:8:38.12:65,0,38	1/1:8,4:11:13.99:220,14,0	1/1:4,2:5:11.38:65,11,0	1/1:5,1:5:2.94:18,3,0	1/1:3,5:6:14.60:109,15,0	1/1:7,0:3:2.92:17,3,0	0/1:9,1:9:3.69:49,0,4	1/1:3,6:9:14.82:128,15,0	0/1:12,8:14:12.72:263,0,13	1/1:4,3:4:13.39:74,13,0	1/1:4,2:5:11.90:125,12,0
chr10	33659787	.	T	TCC	628.19	PASS	AB=0.965;AC=17;AF=0.315;AN=54;BaseQRankSum=1.654;DP=346;FS=0.000;HRun=1;HaplotypeScore=129.6550;InbreedingCoeff=0.0263;MQ=22.44;MQ0=28;MQRankSum=0.789;QD=4.22;ReadPosRankSum=1.722;VQSLOD=-0.6997;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,1:10:2.47:117,2,0	0/1:4,0:3:3.38:3,0,12	./.	0/0:58,0:1:2.98:0,3,21	0/0:5,0:4:3.59:0,4,10	0/1:12,1:12:0.09:0,0,52	0/0:8,0:8:6.58:0,7,35	0/0:13,0:6:2.50:0,2,34	0/0:10,0:8:6.70:0,7,24	0/0:13,0:8:8.95:0,9,48	0/1:5,0:4:0.89:1,0,6	0/0:4,0:4:9.27:0,9,46	0/1:11,0:9:7.14:7,0,32	0/0:12,0:10:14.81:0,15,60	0/1:20,1:10:46.46:46,0,57	0/0:11,0:10:4.02:0,4,30	0/1:12,1:10:7.29:168,0,7	1/1:7,0:7:6.02:151,6,0	0/1:13,0:12:33.39:34,0,33	0/1:6,0:5:1.57:2,0,6	0/1:4,0:3:1.02:24,0,1	0/0:8,0:6:3.92:0,4,45	0/0:6,0:3:2.84:0,3,14	1/1:9,1:9:14.06:154,14,0	0/0:9,0:9:7.64:0,8,54	0/1:20,0:14:39.44:39,0,65	0/0:7,0:4:4.85:0,5,38	0/1:6,2:5:20.02:20,0,24
chr10	33659798	.	CCT	C	1605	PASS	AB=0.883;AC=33;AF=0.635;AN=52;BaseQRankSum=1.213;DP=345;FS=0.000;HRun=0;HaplotypeScore=119.7956;InbreedingCoeff=-0.2628;MQ=24.68;MQ0=27;MQRankSum=-1.187;QD=6.42;ReadPosRankSum=1.280;VQSLOD=3.3369;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:8,2:7:3.27:3,0,51	0/1:1,3:3:15.55:51,0,16	./.	./.	1/1:4,3:4:1.55:4,2,0	0/1:12,4:15:48.70:154,0,49	1/1:6,1:7:11.80:96,12,0	0/1:13,1:9:19.12:19,0,127	1/1:7,3:9:16.27:159,16,0	1/1:17,1:12:3.33:171,3,0	1/1:2,3:4:7.25:43,7,0	0/1:4,0:4:25.94:26,0,30	1/1:9,3:10:23.76:219,24,0	1/1:12,0:10:13.54:78,14,0	0/0:19,2:11:13.86:0,14,204	0/1:12,1:12:16.01:71,0,16	0/1:12,0:9:42.14:42,0,105	0/1:7,0:6:15.57:16,0,95	1/1:13,1:13:8.89:141,9,0	0/1:6,2:7:8.30:42,0,8	1/1:4,1:5:4.19:21,4,0	0/1:10,1:9:32.81:33,0,54	0/0:6,0:3:2.96:0,3,19	0/1:9,3:9:46.66:56,0,47	0/1:12,0:11:17.36:69,0,17	0/1:18,4:14:40.31:134,0,40	0/1:7,2:6:2.44:71,0,2	0/1:6,0:3:3.89:36,0,4
chr10	33659800	.	T	TC	386.47	PASS	AB=0.942;AC=12;AF=0.231;AN=52;BaseQRankSum=-2.563;DP=352;FS=8.134;HRun=2;HaplotypeScore=127.8912;InbreedingCoeff=-0.2252;MQ=24.91;MQ0=27;MQRankSum=-0.019;QD=3.09;ReadPosRankSum=2.542;VQSLOD=-0.0112;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:7:7.85:0,8,53	0/1:4,0:3:23.96:24,0,30	./.	./.	0/0:8,0:5:2.98:0,3,22	0/1:12,4:15:99:237,0,111	0/1:7,1:7:8.22:113,0,8	0/0:15,0:10:22.30:0,22,255	0/1:12,1:12:33.47:77,0,33	0/1:18,0:12:12.06:12,0,73	1/1:5,0:4:0.60:4,1,0	0/0:4,0:4:9.58:0,10,73	0/1:12,0:10:13.73:14,0,26	0/1:12,0:10:1.15:1,0,31	0/0:21,0:11:14.08:0,14,165	0/0:12,0:11:2.69:0,3,67	0/1:9,1:10:11.14:11,0,53	0/0:7,0:7:12.46:0,12,96	0/1:15,0:14:13.61:14,0,64	0/0:8,0:7:3.43:0,3,36	0/0:7,0:7:3.76:0,4,17	0/0:11,0:9:12.77:0,13,117	0/0:6,0:3:3.01:0,3,33	0/0:10,0:9:4.45:0,4,46	0/0:12,0:11:4.22:0,4,54	0/0:20,0:12:15.58:0,16,183	0/1:9,0:5:7.38:7,0,37	0/0:6,0:3:8.76:0,9,67
chr10	33659804	.	CTCTCTCCT	C	5429.54	PASS	AB=0.965;AC=36;AF=0.692;AN=52;BaseQRankSum=0.752;DP=363;FS=59.347;HRun=0;HaplotypeScore=132.8712;InbreedingCoeff=0.3375;MQ=26.29;MQ0=26;MQRankSum=0.247;QD=22.07;ReadPosRankSum=5.259;VQSLOD=2.2303;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:7,1:6:13.67:87,0,14	1/1:4,0:3:0:143,0,0	./.	./.	0/0:9,0:6:11.10:0,11,102	0/1:17,0:16:14.34:14,0,122	0/1:11,0:9:20.02:20,0,73	0/1:18,0:10:35.31:35,0,189	0/1:15,0:14:1.63:2,0,319	1/1:9,9:13:26.33:628,26,0	1/1:5,0:4:12.04:236,12,0	1/1:5,0:5:6.83:46,7,0	1/1:9,3:10:24.08:504,24,0	1/1:5,9:12:14.91:214,15,0	0/0:25,0:15:20.05:0,20,240	1/1:5,9:13:26.91:549,27,0	0/0:11,0:9:9.12:0,9,231	0/1:8,1:7:99:137,0,103	1/1:9,8:15:39.10:772,39,0	1/1:6,3:8:18.27:302,18,0	1/1:8,0:7:9.83:88,10,0	1/1:5,7:9:11.08:271,11,0	0/0:7,0:3:2.37:0,2,8	0/0:11,0:8:2.97:0,3,37	1/1:3,9:11:18.22:198,18,0	1/1:19,4:14:32.87:610,33,0	1/1:6,3:6:20.90:370,21,0	1/1:5,1:3:9.03:202,9,0
chr10	33659810	.	CCT	C	3820.20	PASS	AB=0.895;AC=35;AF=0.673;AN=52;BaseQRankSum=1.398;DP=346;FS=57.599;HRun=0;HaplotypeScore=122.1786;InbreedingCoeff=0.4759;MQ=27.63;MQ0=23;MQRankSum=-1.231;QD=16.12;ReadPosRankSum=4.711;VQSLOD=1.3868;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:8,1:7:5.09:5,0,38	1/1:0,4:3:9.02:109,9,0	./.	./.	0/0:9,0:6:11.21:0,11,102	0/0:14,1:15:10.18:0,10,243	0/1:12,0:9:2.47:2,0,99	0/1:12,4:10:99:117,0,289	0/0:15,0:14:16.42:0,16,228	1/1:10,6:10:25.04:297,25,0	1/1:1,4:4:12.04:161,12,0	1/1:2,2:4:5.77:54,6,0	1/1:4,6:9:23.84:244,24,0	1/1:10,3:11:14.91:168,15,0	0/1:22,4:16:82.74:83,0,161	1/1:10,4:13:26.51:221,27,0	0/0:13,0:11:11.60:0,12,163	0/1:9,1:7:24.18:24,0,73	1/1:13,5:16:38.19:438,38,0	1/1:5,5:9:23.65:324,24,0	1/1:8,1:8:11.71:111,12,0	1/1:7,5:9:24.08:340,24,0	0/0:7,1:4:2.68:0,3,11	0/0:10,1:8:1.45:0,1,39	1/1:10,2:11:18.05:254,18,0	1/1:8,14:14:41.68:520,42,0	1/1:3,6:7:20.65:230,21,0	1/1:3,3:3:9.02:116,9,0
chr10	33659812	.	T	TC	1298.35	PASS	AB=0.929;AC=35;AF=0.673;AN=52;BaseQRankSum=-0.449;DP=355;FS=17.920;HRun=2;HaplotypeScore=131.9607;InbreedingCoeff=0.1687;MQ=28.60;MQ0=23;MQRankSum=-1.231;QD=4.97;ReadPosRankSum=2.089;VQSLOD=-0.6336;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:10,0:9:0.85:1,0,33	1/1:4,0:3:5.11:35,5,0	./.	./.	0/0:8,1:6:11.66:0,12,105	0/1:10,2:14:64.27:64,0,185	0/1:11,1:8:34.42:34,0,87	0/0:16,0:10:17.52:0,18,260	0/1:14,1:15:18.67:19,0,261	1/1:16,0:10:7.85:85,8,0	1/1:5,0:4:6.82:88,7,0	0/1:5,0:5:0.90:10,0,1	1/1:10,0:10:17.51:117,18,0	1/1:15,0:13:2.83:74,3,0	0/0:26,0:16:23.47:0,23,190	1/1:14,0:13:13:150,13,0	0/1:12,1:11:26.66:27,0,157	0/1:9,1:8:66.51:67,0,67	1/1:21,0:18:11.29:151,11,0	1/1:11,0:10:14.32:140,14,0	1/1:8,3:10:9.75:84,10,0	1/1:12,0:9:12.28:80,12,0	1/1:11,0:7:0.10:15,0,0	0/0:10,0:7:2.94:0,3,22	0/1:12,0:11:2.52:15,0,3	1/1:22,0:14:16.14:125,16,0	0/1:9,0:6:3.27:34,0,3	1/1:6,0:3:3.78:42,4,0
chr10	33659824	.	TTC	T	773.89	PASS	AB=0.762;AC=9;AF=0.167;AN=54;BaseQRankSum=-1.426;DP=415;FS=29.571;HRun=0;HaplotypeScore=135.6299;InbreedingCoeff=0.3326;MQ=33.54;MQ0=23;MQRankSum=-0.597;QD=7.44;ReadPosRankSum=-0.933;VQSLOD=1.5894;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:12:21:0,21,282	0/0:4,0:3:8.98:0,9,101	./.	0/0:17,0:2:4.09:0,4,17	1/1:3,6:8:11.90:147,12,0	0/1:7,7:16:17.65:133,0,18	0/1:7,8:11:9.07:98,0,9	0/0:27,0:17:44.11:0,44,577	0/1:4,13:17:4.22:266,0,4	0/1:19,1:13:1.40:1,0,403	0/0:9,0:8:17.02:0,17,177	0/0:3,0:7:6.89:0,7,79	0/0:14,0:12:25.12:0,25,377	0/0:15,0:13:13.19:0,13,127	0/0:25,0:17:27.09:0,27,440	0/0:17,0:16:30.10:0,30,455	1/1:5,8:11:6.92:250,7,0	0/1:10,1:9:16.44:16,0,275	0/0:27,0:21:44.82:0,45,735	0/0:16,0:13:26.59:0,27,443	0/0:12,0:11:20.10:0,20,288	0/0:15,0:12:33.02:0,33,463	0/0:11,0:11:16.94:0,17,133	0/0:2,3:5:5.98:0,6,47	0/0:14,0:12:18.04:0,18,237	0/0:25,0:17:50.58:0,51,679	0/0:9,0:5:21.06:0,21,293	0/0:12,0:8:18.02:0,18,219
chr10	33659828	.	C	CCT	231.40	PASS	AB=0.948;AC=6;AF=0.111;AN=54;BaseQRankSum=0.236;DP=442;FS=2.878;HRun=0;HaplotypeScore=147.1984;InbreedingCoeff=0.0747;MQ=34.56;MQ0=23;MQRankSum=-2.339;QD=2.79;ReadPosRankSum=0.597;VQSLOD=2.5845;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:13:14.82:0,15,282	0/0:4,0:3:9:0,9,98	./.	0/0:13,0:2:5.98:0,6,68	0/0:11,0:9:17.82:0,18,150	0/1:16,2:18:99:146,0,135	0/1:15,1:11:40.07:79,0,40	0/0:28,0:18:4.65:0,5,619	0/1:19,1:19:91.86:92,0,145	0/0:20,0:13:34.89:0,35,438	0/0:11,0:10:17.31:0,17,186	0/0:10,0:10:6.39:0,6,80	0/0:15,0:13:28.54:0,29,349	0/0:16,0:14:12.85:0,13,129	0/0:28,0:19:30.10:0,30,474	0/0:20,0:19:32.99:0,33,474	0/0:13,0:11:24.15:0,24,161	0/0:11,0:9:27.03:0,27,367	0/0:29,0:22:64.26:0,64,892	0/0:16,0:13:30.27:0,30,430	0/0:13,0:12:21:0,21,307	0/0:15,0:12:33.11:0,33,494	0/1:19,0:13:17.77:18,0,63	1/1:10,0:5:2.19:12,2,0	0/0:15,0:13:20.08:0,20,252	0/0:28,0:20:54.08:0,54,682	0/0:10,0:6:19.31:0,19,281	0/0:13,0:10:23.96:0,24,288
chr10	33659972	.	CCT	C	55.08	PASS	AB=0.904;AC=6;AF=0.107;AN=56;BaseQRankSum=6.375;DP=705;FS=4.728;HRun=0;HaplotypeScore=99.8593;InbreedingCoeff=-0.1167;MQ=39.89;MQ0=60;MQRankSum=-4.584;QD=0.54;ReadPosRankSum=-2.978;VQSLOD=0.7027;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,2:30:52.73:0,53,998	0/1:2,1:3:28.35:28,0,80	0/0:62,0:4:11.93:0,12,145	0/0:82,1:5:11.70:0,12,163	0/0:21,0:20:32.83:0,33,614	0/0:25,0:24:48.62:0,49,1255	0/0:25,0:24:63.19:0,63,1120	0/0:26,0:18:48.07:0,48,834	0/0:20,0:19:45.13:0,45,769	0/1:28,5:32:46.86:47,0,1470	0/0:10,1:8:24.07:0,24,432	0/0:21,0:13:6.86:0,7,130	0/0:26,0:26:60.12:0,60,1115	0/0:26,0:25:63.17:0,63,1179	0/0:26,0:20:44.97:0,45,754	0/0:26,0:26:75.25:0,75,1411	0/0:19,0:18:37.59:0,38,811	0/0:15,0:15:36.56:0,37,678	0/0:17,0:13:39.13:0,39,709	0/0:16,0:15:41.02:0,41,795	0/0:24,1:23:69.23:0,69,1341	0/1:17,0:16:0.78:1,0,717	0/1:22,0:18:34.58:35,0,42	0/0:29,0:20:18.96:0,19,297	0/1:14,2:15:26.19:26,0,503	0/0:31,1:28:26.01:0,26,1507	0/0:18,0:17:39.57:0,40,914	0/1:7,1:10:35.53:36,0,281
chr10	33659974	.	TTC	T	300.68	PASS	AB=0.835;AC=5;AF=0.089;AN=56;BaseQRankSum=4.267;DP=720;FS=1.729;HRun=0;HaplotypeScore=102.1459;InbreedingCoeff=-0.1072;MQ=39.57;MQ0=62;MQRankSum=-1.332;QD=2.66;ReadPosRankSum=-1.574;VQSLOD=1.8955;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:30:3.68:0,4,597	0/0:3,0:3:6.02:0,6,100	0/0:59,0:4:6.02:0,6,100	0/0:82,0:5:9.03:0,9,150	0/0:21,0:21:30.29:0,30,493	0/0:26,0:24:59.57:0,60,960	0/0:25,0:24:45.04:0,45,680	0/0:27,0:18:33.11:0,33,552	0/0:21,0:20:39.11:0,39,600	0/0:36,0:33:67.05:0,67,1223	0/0:11,0:8:21.04:0,21,303	0/1:13,8:13:56.81:57,0,161	0/0:25,0:25:63.69:0,64,1050	0/0:24,0:23:60.16:0,60,960	0/1:25,1:20:2.39:2,0,446	0/0:26,0:26:72.25:0,72,1210	0/0:20,1:19:1.47:0,1,536	0/0:16,0:16:38.44:0,38,548	0/0:19,0:14:36.07:0,36,552	0/0:15,0:14:36.12:0,36,604	0/0:28,0:25:66.21:0,66,1086	0/0:17,0:15:30.05:0,30,589	0/1:13,10:19:99:143,0,100	0/1:22,8:20:99:198,0,120	0/0:17,0:17:22.06:0,22,440	0/0:34,0:30:81.66:0,82,1374	0/0:18,0:17:45.13:0,45,707	0/1:13,0:12:0.75:1,0,284
chr10	33660002	.	T	TTC	2524.44	PASS	AB=0.870;AC=15;AF=0.288;AN=52;BaseQRankSum=3.478;DP=616;FS=1.685;HRun=0;HaplotypeScore=90.9908;InbreedingCoeff=0.5063;MQ=40.38;MQ0=40;MQRankSum=1.695;QD=11.74;ReadPosRankSum=-3.998;VQSLOD=2.7175;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:23,9:28:25.35:494,0,25	0/0:4,0:4:6.02:0,6,77	./.	./.	1/1:16,1:14:12.20:172,12,0	0/1:16,1:15:2.90:232,0,3	1/1:8,5:12:3.01:50,3,0	0/0:40,0:17:32.10:0,32,360	1/1:22,0:19:24.07:353,24,0	0/0:30,1:21:4.79:0,5,588	0/0:11,0:6:9.03:0,9,116	0/1:16,16:20:4.96:438,0,5	0/0:30,0:29:72.23:0,72,925	0/0:24,0:21:48.53:0,49,605	0/1:18,0:12:41.19:41,0,78	0/0:27,0:25:60.19:0,60,765	0/1:18,0:15:99:264,0,118	0/0:14,0:14:29.94:0,30,420	0/0:17,0:10:30.10:0,30,386	0/0:17,0:15:33.11:0,33,419	0/0:29,1:24:31.06:0,31,800	0/0:19,0:15:37:0,37,455	1/1:5,15:15:21.07:354,21,0	1/1:7,11:15:17.18:298,17,0	0/0:15,0:14:18.26:0,18,250	0/0:42,0:33:87.26:0,87,1098	0/0:24,0:19:39.13:0,39,498	0/0:22,0:17:24.08:0,24,309
chr10	33660102	.	T	TTC	759.97	PASS	AB=0.930;AC=9;AF=0.161;AN=56;BaseQRankSum=4.636;DP=722;FS=0.000;HRun=0;HaplotypeScore=96.8940;InbreedingCoeff=0.5578;MQ=39.42;MQ0=79;MQRankSum=-2.068;QD=3.62;ReadPosRankSum=-0.489;VQSLOD=2.1960;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:32:71.72:0,72,910	0/0:6,0:6:8.28:0,8,115	0/0:84,0:9:21.01:0,21,239	0/1:95,0:8:4.72:5,0,102	0/0:24,1:25:4.44:0,4,575	0/0:30,1:30:40.10:0,40,874	0/0:27,0:15:43.90:0,44,521	0/0:40,0:20:47.66:0,48,648	0/0:22,0:19:38.90:0,39,605	0/0:19,0:15:33.11:0,33,425	0/0:13,0:13:27.09:0,27,347	1/1:10,0:4:11.40:132,11,0	0/0:14,0:13:27.02:0,27,314	0/0:24,0:23:58.26:0,58,734	0/1:41,5:36:99:122,0,545	0/0:21,0:16:33.09:0,33,411	0/1:20,2:16:17.48:17,0,335	0/0:15,0:14:25.33:0,25,327	0/0:16,0:14:33.11:0,33,421	0/0:18,0:16:37.38:0,37,497	0/0:25,0:22:50.75:0,51,627	0/0:22,0:21:51.12:0,51,636	1/1:9,1:10:9.03:147,9,0	1/1:18,6:20:32.23:484,32,0	0/0:13,0:12:23.41:0,23,307	0/0:18,0:14:39.13:0,39,502	0/0:13,0:13:28.36:0,28,383	0/0:12,0:10:22.32:0,22,306
chr10	33660168	.	TC	T	274.78	PASS	AB=0.762;AC=1;AF=0.019;AN=52;BaseQRankSum=5.260;DP=625;FS=2.342;HRun=2;HaplotypeScore=103.5371;InbreedingCoeff=-0.0268;MQ=42.16;MQ0=117;MQRankSum=-4.832;QD=8.59;ReadPosRankSum=-1.429;VQSLOD=0.7344;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:33:78.74:0,79,1280	0/0:7,0:5:12.04:0,12,175	./.	./.	0/0:32,1:23:38.31:0,38,499	0/0:27,0:26:72.24:0,72,1047	0/0:24,1:12:26.52:0,27,340	0/0:46,0:2:6.02:0,6,88	0/0:34,0:25:54.17:0,54,783	0/0:28,0:23:63.21:0,63,914	0/0:20,0:15:36.08:0,36,498	0/0:25,0:14:29.44:0,29,375	0/0:30,0:24:57.09:0,57,844	0/0:20,0:19:54.10:0,54,760	0/1:22,10:20:99:349,0,268	0/0:22,0:18:51.17:0,51,753	0/0:25,2:21:21.80:0,22,387	0/0:12,0:10:27.06:0,27,371	0/0:12,0:7:21.07:0,21,314	0/0:22,0:18:39.13:0,39,567	0/0:27,0:23:55.74:0,56,804	0/0:18,0:15:37.94:0,38,544	0/0:22,0:11:23.91:0,24,305	0/0:32,0:20:49.52:0,50,642	0/0:12,0:8:12.04:0,12,179	0/0:20,0:19:57.19:0,57,840	0/0:21,0:20:51.17:0,51,758	0/0:12,0:7:18.06:0,18,260
chr10	33660180	.	TC	T	2024.05	PASS	AB=0.753;AC=9;AF=0.173;AN=52;BaseQRankSum=9.661;DP=635;FS=16.845;HRun=2;HaplotypeScore=108.1930;InbreedingCoeff=-0.2108;MQ=42.21;MQ0=108;MQRankSum=-6.176;QD=7.97;ReadPosRankSum=1.474;VQSLOD=-0.1118;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:28:61.55:0,62,1027	0/0:10,0:8:21.02:0,21,267	./.	./.	0/1:13,14:17:99:165,0,111	0/1:10,14:23:99:467,0,330	0/1:17,8:12:56.19:56,0,171	0/0:42,0:7:21.07:0,21,308	0/1:24,10:24:99:250,0,368	0/0:31,0:26:75.24:0,75,1093	0/0:19,0:15:33.11:0,33,494	0/1:14,10:15:98.57:307,0,99	0/0:33,0:27:66.11:0,66,946	0/0:20,0:19:57.19:0,57,846	0/1:30,6:22:99:263,0,282	0/0:24,0:20:57.19:0,57,843	0/1:16,11:21:99:339,0,109	0/0:11,0:9:24.08:0,24,359	0/0:13,0:6:18.06:0,18,270	0/0:24,0:20:47.91:0,48,657	0/0:25,0:21:52.02:0,52,730	0/0:17,0:16:42.10:0,42,577	0/1:18,4:12:92.72:93,0,181	0/1:28,7:23:99:221,0,308	0/0:14,0:11:27:0,27,344	0/0:24,0:23:68.91:0,69,934	0/0:25,0:24:57.19:0,57,837	0/0:12,0:7:18.06:0,18,269
chr10	33660226	.	T	TC	1472.83	PASS	AB=0.719;AC=7;AF=0.125;AN=56;BaseQRankSum=8.451;DP=748;FS=18.283;HRun=1;HaplotypeScore=134.2972;InbreedingCoeff=0.7639;MQ=39.35;MQ0=69;MQRankSum=-7.214;QD=16.93;ReadPosRankSum=-3.316;VQSLOD=2.0475;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:37:75.90:0,76,929	0/0:12,0:12:36.07:0,36,447	0/0:62,0:8:21.06:0,21,262	0/0:86,0:10:23.71:0,24,254	0/0:4,20:24:1.60:0,2,37	1/1:6,12:17:38.52:477,39,0	1/1:7,19:18:25.73:290,26,0	0/0:39,0:30:87.19:0,87,1076	1/1:7,13:15:33.09:462,33,0	0/0:27,0:25:75.24:0,75,968	0/0:17,0:17:41.80:0,42,517	0/0:27,0:15:32.66:0,33,398	0/0:32,0:31:84.26:0,84,1070	0/0:22,0:21:45.15:0,45,581	0/0:21,0:16:33.10:0,33,420	0/0:36,0:35:85.82:0,86,1089	0/1:14,9:18:55.11:392,0,55	0/0:12,0:11:30.07:0,30,367	0/0:14,0:13:39.13:0,39,504	0/0:19,0:19:14.47:0,14,372	0/0:23,0:19:35.98:0,36,442	0/0:19,0:19:35.82:0,36,466	0/0:23,0:19:17.45:0,17,233	0/0:28,0:18:28.73:0,29,357	0/0:20,0:18:44.87:0,45,566	0/0:24,0:23:66.21:0,66,851	0/0:24,0:20:53.88:0,54,650	0/0:7,0:5:12.04:0,12,155
chr10	33660240	.	CCTCTCT	C	378.71	PASS	AB=0.974;AC=13;AF=0.325;AN=40;BaseQRankSum=0.340;DP=715;FS=10.139;HRun=0;HaplotypeScore=158.3863;InbreedingCoeff=0.2486;MQ=37.89;MQ0=69;MQRankSum=-1.061;QD=1.93;ReadPosRankSum=0.821;VQSLOD=2.2600;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:34:0:0,0,0	./.	./.	./.	0/0:23,0:23:1.18:0,1,3	0/0:21,0:20:0:0,0,0	0/0:26,0:16:0:0,0,0	./.	./.	1/1:28,1:26:3.01:41,3,0	1/1:19,0:19:3.01:35,3,0	./.	1/1:24,1:26:6.02:101,6,0	0/0:22,0:21:1.83:0,2,3	0/0:19,0:16:8.86:0,9,91	0/1:32,2:35:99:140,0,100	1/1:20,0:14:3.01:42,3,0	0/0:14,0:13:7.82:0,8,53	1/1:18,0:15:6.02:104,6,0	./.	./.	0/0:24,0:23:1.70:0,2,37	0/0:19,0:16:0:0,0,0	0/1:24,0:18:1.15:11,0,1	0/0:19,0:17:0:0,0,0	0/0:24,0:22:0.89:0,1,2	0/1:22,0:18:9.69:10,0,21	0/0:11,0:7:3.01:0,3,49
chr10	33661754	.	A	AG	29097.30	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-9.813;DP=696;FS=2.771;HRun=0;HaplotypeScore=57.6424;InbreedingCoeff=0.9992;MQ=86.09;MQ0=0;MQRankSum=-10.833;QD=44.63;ReadPosRankSum=6.543;VQSLOD=4.3558;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,26:27:72.25:1151,72,0	1/1:0,11:11:30.10:480,30,0	0/0:14,0:14:42.13:0,42,564	0/0:30,0:30:81.04:0,81,1070	1/1:1,25:26:75.26:1199,75,0	1/1:0,38:38:99:1726,108,0	1/1:1,16:17:48.16:767,48,0	1/1:0,40:40:99:1919,120,0	1/1:0,25:25:69.24:1103,69,0	1/1:0,25:25:75.23:1173,75,0	1/1:1,22:23:63.21:1007,63,0	1/1:1,24:25:63.21:1007,63,0	1/1:0,33:33:90.31:1438,90,0	1/1:0,26:26:78.27:1247,78,0	1/1:0,22:22:63.21:1007,63,0	1/1:0,25:25:72.25:1151,72,0	1/1:0,16:16:45.15:719,45,0	1/1:0,18:18:54.18:863,54,0	1/1:1,15:16:48.14:740,48,0	1/1:2,22:24:54.18:863,54,0	1/1:0,29:29:87.30:1391,87,0	1/1:0,30:30:81.28:1295,81,0	1/1:0,25:25:66.23:1054,66,0	1/1:0,31:31:84.29:1343,84,0	1/1:2,33:35:93.32:1487,93,0	1/1:2,30:32:93.32:1478,93,0	1/1:1,23:24:66.22:1055,66,0	1/1:0,9:9:27.09:432,27,0
chr10	33662192	.	GGT	G	15491.83	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=14.852;DP=708;FS=1.938;HRun=0;HaplotypeScore=87.7640;InbreedingCoeff=0.9919;MQ=85.24;MQ0=3;MQRankSum=-4.219;QD=38.92;ReadPosRankSum=0.703;VQSLOD=6.6412;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,108,1980	1/1:0,13:13:36.12:516,36,0	0/0:20,0:20:54.18:0,54,936	0/0:25,0:25:63.21:0,63,1072	0/0:35,0:35:99:0,105,1924	0/0:30,0:30:90.31:0,90,1643	0/0:23,0:23:69.24:0,69,1265	1/1:4,29:33:87.28:1225,87,0	0/0:23,0:23:69.24:0,69,1252	1/1:0,27:27:81.27:1159,81,0	1/1:1,23:24:69.23:988,69,0	0/0:26,0:26:78.25:0,78,1398	1/1:0,25:25:69.23:989,69,0	1/1:2,33:35:99:1419,99,0	0/0:32,0:32:90.31:0,90,1648	1/1:0,29:28:81.27:1161,81,0	0/0:21,0:21:60.21:0,60,1099	1/1:1,18:19:48.16:688,48,0	1/1:3,18:21:54.17:756,54,0	1/1:2,28:30:84.28:1203,84,0	1/1:0,28:28:69.23:987,69,0	1/1:2,25:27:72.20:1008,72,0	0/0:22,0:22:66.23:0,66,1209	0/0:17,0:17:51.17:0,51,927	1/1:2,24:25:69.23:988,69,0	1/1:1,31:32:93.31:1330,93,0	1/1:1,23:24:66.22:946,66,0	1/1:2,3:4:9.03:129,9,0
chr10	33663969	.	C	CTGT	4089.16	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-9.853;DP=834;FS=6.497;HRun=0;HaplotypeScore=107.4977;InbreedingCoeff=0.9752;MQ=60.22;MQ0=6;MQRankSum=1.411;QD=30.75;ReadPosRankSum=2.954;VQSLOD=3.5571;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:69,0:69:99:0,159,2013	0/0:14,0:14:36.07:0,36,496	0/0:38,0:23:39:0,39,460	0/0:37,0:25:33.54:0,34,499	1/1:3,21:24:8.38:495,8,0	1/1:5,15:20:21.07:430,21,0	1/1:3,26:30:44.89:921,45,0	0/0:39,0:39:71.77:0,72,898	1/1:4,18:22:39.13:791,39,0	0/0:30,0:29:57.16:0,57,769	0/0:32,0:32:45.08:0,45,573	0/0:26,0:26:66.19:0,66,915	0/0:36,0:36:90.21:0,90,1200	0/0:22,0:22:48.15:0,48,675	0/0:27,0:27:63.18:0,63,871	0/0:35,0:35:90.28:0,90,1262	1/1:5,31:37:61.45:1453,61,0	0/0:16,0:16:11.42:0,11,395	0/0:34,0:34:53.42:0,53,584	0/0:35,0:35:77.63:0,78,874	0/0:40,0:40:96.20:0,96,1262	0/0:20,0:20:45.08:0,45,570	0/0:21,0:21:45.05:0,45,512	0/0:23,0:22:57.17:0,57,802	0/0:34,0:33:75.14:0,75,929	0/0:23,0:23:57.11:0,57,731	0/0:34,0:34:84.23:0,84,1155	0/0:16,0:16:45.07:0,45,564
chr10	33664415	.	AAGGAGGAGG	A	1896.80	PASS	AB=0.944;AC=26;AF=0.542;AN=48;BaseQRankSum=-2.201;DP=338;FS=2.187;HRun=0;HaplotypeScore=80.5847;InbreedingCoeff=0.4277;MQ=49.45;MQ0=35;MQRankSum=1.143;QD=11.09;ReadPosRankSum=1.454;VQSLOD=1.8631;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:7:3.01:0,3,52	1/1:10,0:9:9.86:103,10,0	./.	0/0:22,0:8:0.47:0,0,1	1/1:12,0:12:15.02:142,15,0	0/1:14,0:14:5.39:96,0,5	0/1:16,0:14:4.02:133,0,4	0/0:16,0:12:2.99:0,3,23	1/1:15,0:15:30.43:262,30,0	0/1:10,0:11:5.07:45,0,5	1/1:11,0:10:8.93:73,9,0	1/1:12,0:10:15.05:363,15,0	./.	1/1:6,0:6:6.02:103,6,0	1/1:10,0:10:9.03:139,9,0	1/1:9,0:8:11.98:115,12,0	1/1:11,0:8:9.01:84,9,0	./.	0/0:14,0:11:3:0,3,27	0/0:12,0:10:4.05:0,4,73	0/0:9,0:6:8.94:0,9,67	./.	0/0:12,8:19:2.41:0,2,15	1/1:13,0:10:12.03:219,12,0	1/1:8,0:8:10.83:119,11,0	0/0:12,0:10:18.01:0,18,181	0/0:14,0:13:2.96:0,3,19	0/1:10,0:7:48.27:58,0,48
chr10	33664539	.	AAGAAGAAGAAGC	A	6517.31	PASS	AB=1.000;AC=48;AF=0.857;AN=56;BaseQRankSum=2.455;DP=556;FS=1.716;HRun=0;HaplotypeScore=157.3274;InbreedingCoeff=0.3850;MQ=50.43;MQ0=71;MQRankSum=1.524;QD=12.75;ReadPosRankSum=7.062;VQSLOD=3.3747;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:15:44.49:310,44,0	1/1:18,0:17:42.41:357,42,0	0/0:31,0:9:17.89:0,18,151	0/0:14,0:5:9.71:0,10,67	1/1:19,0:19:29.43:180,29,0	1/1:13,0:12:33.16:241,33,0	1/1:15,0:13:32.66:239,33,0	1/1:31,0:17:47.74:366,48,0	1/1:20,0:17:25.58:288,26,0	1/1:19,0:15:44.52:367,45,0	1/1:18,0:16:41.86:333,42,0	0/1:21,0:19:5.90:37,0,6	1/1:18,0:16:9.01:95,9,0	1/1:12,0:9:26.98:229,27,0	0/1:17,0:17:12.89:41,0,13	1/1:11,0:10:26.94:224,27,0	1/1:22,0:16:13.99:249,14,0	1/1:26,0:17:44.73:349,45,0	1/1:2,8:8:20.90:174,21,0	1/1:15,0:13:35.92:296,36,0	1/1:17,0:16:47.94:400,48,0	1/1:23,0:20:19.58:118,20,0	0/1:22,0:21:49.75:50,0,170	0/1:33,0:25:9.94:21,0,10	1/1:21,0:20:59.56:467,60,0	1/1:6,22:25:74.91:665,75,0	1/1:18,0:15:44.83:361,45,0	1/1:25,0:20:4.06:61,4,0
chr10	33664542	.	AAGAAGAAGC	A	6884.61	PASS	AB=1.000;AC=50;AF=0.893;AN=56;BaseQRankSum=1.865;DP=558;FS=12.178;HRun=0;HaplotypeScore=141.8488;InbreedingCoeff=0.5365;MQ=52.52;MQ0=62;MQRankSum=0.137;QD=13.50;ReadPosRankSum=6.726;VQSLOD=2.3565;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:16:47.48:335,47,0	1/1:19,0:18:50.73:405,51,0	0/0:34,0:12:26.49:0,26,232	0/0:14,0:5:9.71:0,10,67	1/1:20,0:20:29.43:180,29,0	1/1:13,0:12:20.08:225,20,0	1/1:15,0:14:35.66:265,36,0	1/1:32,0:18:50.74:392,51,0	1/1:18,0:15:44.13:334,44,0	1/1:20,0:16:47.53:370,48,0	1/1:18,0:16:43.46:336,43,0	1/1:20,0:19:8.67:51,9,0	1/1:18,0:16:8.94:66,9,0	1/1:13,0:10:29.97:253,30,0	0/1:16,0:16:8.14:41,0,8	1/1:13,0:12:32.94:275,33,0	1/1:22,0:16:17.77:253,18,0	1/1:24,0:17:47.75:370,48,0	1/1:10,0:8:20.94:174,21,0	1/1:15,0:13:35.92:296,36,0	1/1:19,0:18:53.91:447,54,0	1/1:2,21:21:19.57:118,20,0	0/1:21,0:20:57.22:57,0,80	1/1:31,0:25:4.05:32,4,0	1/1:20,0:20:59.62:470,60,0	1/1:27,0:25:74.83:632,75,0	1/1:19,0:16:47.88:389,48,0	1/1:25,0:20:8.86:120,9,0
chr10	33664545	.	AAGAAGC	A	7055.33	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=1.283;DP=549;FS=17.817;HRun=0;HaplotypeScore=122.4308;InbreedingCoeff=0.7604;MQ=54.94;MQ0=47;MQRankSum=-1.792;QD=14.17;ReadPosRankSum=5.781;VQSLOD=2.6555;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:16:47.48:335,47,0	1/1:19,0:18:50.76:395,51,0	0/0:36,0:14:25.67:0,26,254	0/0:15,0:6:12.24:0,12,84	1/1:20,0:20:29.43:180,29,0	1/1:15,0:14:38.62:287,39,0	1/1:15,0:14:35.68:265,36,0	1/1:28,0:19:53.73:415,54,0	1/1:17,0:15:44.13:334,44,0	1/1:18,0:15:44.54:348,45,0	1/1:19,0:17:46.93:360,47,0	1/1:20,0:19:8.82:53,9,0	1/1:18,0:16:4.55:28,5,0	1/1:12,0:10:29.97:253,30,0	1/1:17,0:17:11.82:77,12,0	1/1:13,0:12:32.94:275,33,0	1/1:22,0:16:22.96:258,23,0	1/1:24,0:18:50.74:395,51,0	1/1:10,0:8:20.94:174,21,0	1/1:16,0:15:41.92:346,42,0	1/1:20,0:19:56.91:472,57,0	1/1:22,0:21:19.98:118,20,0	1/1:18,0:17:8.22:81,8,0	1/1:27,0:23:5.20:34,5,0	1/1:20,0:20:59.62:470,60,0	1/1:25,0:23:68.80:568,69,0	1/1:21,0:17:53.79:427,54,0	1/1:4,20:20:6.02:107,6,0
chr10	33664548	.	AAGC	A	7253.10	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=3.202;DP=540;FS=29.803;HRun=0;HaplotypeScore=103.8319;InbreedingCoeff=0.7837;MQ=57.44;MQ0=27;MQRankSum=-3.601;QD=14.95;ReadPosRankSum=4.774;VQSLOD=2.4638;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:18:53.47:383,53,0	1/1:17,0:17:50.73:393,51,0	0/0:38,0:16:31.31:0,31,307	0/0:17,0:8:18.24:0,18,142	1/1:0,21:21:29.43:180,29,0	1/1:14,0:14:40.24:292,40,0	1/1:15,0:15:35.69:266,36,0	1/1:4,24:24:62.68:485,63,0	1/1:18,0:17:50.12:383,50,0	1/1:2,16:16:44.39:349,44,0	1/1:18,0:16:47.43:362,47,0	1/1:21,0:21:8.77:52,9,0	1/1:0,16:16:2.97:24,3,0	1/1:12,0:11:32.97:278,33,0	1/1:18,0:18:11.82:77,12,0	1/1:12,0:11:32.94:275,33,0	1/1:19,0:16:35.79:274,36,0	1/1:23,0:18:50.74:395,51,0	1/1:8,0:8:20.94:174,21,0	1/1:16,0:15:41.92:346,42,0	1/1:21,0:20:59.91:497,60,0	1/1:22,0:21:20.39:119,20,0	1/1:17,0:17:16.44:104,16,0	1/1:25,0:22:5.88:36,6,0	1/1:20,0:20:59.62:470,60,0	1/1:23,0:22:65.81:545,66,0	1/1:20,0:17:53.79:427,54,0	1/1:23,0:20:6.02:71,6,0
chr10	33664549	.	AGCGGAG	A	704.73	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-4.297;DP=538;FS=0.865;HRun=0;HaplotypeScore=148.6046;InbreedingCoeff=0.8773;MQ=57.67;MQ0=23;MQRankSum=-5.610;QD=6.78;ReadPosRankSum=-3.724;VQSLOD=1.4286;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:20:59.47:0,59,436	0/0:17,0:17:46.13:0,46,379	0/0:38,0:16:45.01:0,45,1182	0/0:17,0:8:17.89:0,18,414	0/0:21,0:21:28.34:0,28,171	0/0:13,0:14:40.75:0,41,294	0/0:15,0:15:35.61:0,36,267	0/0:26,0:24:59.13:0,59,489	0/0:17,0:17:45.04:0,45,401	0/0:17,0:15:27:0,27,301	0/0:18,0:16:41.82:0,42,371	1/1:0,21:21:9.03:168,9,0	0/0:16,0:16:3:0,3,26	0/0:12,0:11:32.96:0,33,281	1/1:0,18:18:12.04:242,12,0	0/0:12,0:11:32.93:0,33,275	0/0:19,0:16:38.81:0,39,320	0/0:22,0:18:22.83:0,23,357	0/0:8,0:8:20.74:0,21,153	0/0:15,0:15:37.23:0,37,314	0/0:21,0:20:59.96:0,60,516	0/0:22,0:21:16.21:0,16,99	1/1:0,17:17:18.06:313,18,0	1/1:3,22:22:6.02:107,6,0	0/0:20,0:20:55.12:0,55,441	0/0:23,0:22:61.66:0,62,495	0/0:21,0:18:56.53:0,57,444	1/1:23,0:20:5.62:30,6,0
chr10	33665705	.	A	AT	379.84	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-4.167;DP=515;FS=0.889;HRun=8;HaplotypeScore=49.6578;InbreedingCoeff=0.9188;MQ=80.31;MQ0=0;MQRankSum=-0.006;QD=18.99;ReadPosRankSum=0.960;VQSLOD=3.2594;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:72:0,72,653	0/0:3,0:3:9:0,9,82	0/0:13,0:13:20.69:0,21,199	0/0:14,0:14:24.01:0,24,218	0/0:18,0:18:51.03:0,51,467	0/0:26,0:26:69.02:0,69,627	0/0:16,0:16:48.01:0,48,435	0/0:22,0:22:60.01:0,60,544	0/0:19,0:19:54.02:0,54,491	0/0:16,0:16:15.71:0,16,330	0/0:19,0:19:51.03:0,51,467	0/0:15,0:15:39.02:0,39,357	0/0:19,0:20:51.01:0,51,463	0/0:18,0:18:53.97:0,54,484	1/1:4,15:20:20.51:472,21,0	0/0:18,0:18:51.01:0,51,463	0/0:39,0:39:99:0,111,1001	0/0:17,0:17:45.02:0,45,412	0/0:23,0:23:60:0,60,538	0/0:20,1:21:22.33:0,22,450	0/0:18,0:18:51:0,51,461	0/0:19,0:19:42.01:0,42,384	0/0:10,0:10:27.01:0,27,244	0/0:15,0:15:39.02:0,39,357	0/0:13,0:13:38.93:0,39,343	0/0:21,0:21:62.97:0,63,567	0/0:23,0:23:57:0,57,516	0/0:13,0:13:33:0,33,298
chr10	33665899	.	T	TAAA	7454.34	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-10.108;DP=439;FS=0.000;HRun=13;HaplotypeScore=78.4518;InbreedingCoeff=0.9345;MQ=80.92;MQ0=3;MQRankSum=-0.678;QD=26.16;ReadPosRankSum=-4.766;VQSLOD=2.8103;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,0:20:40.88:302,41,0	1/1:0,6:6:18.06:305,18,0	0/0:13,0:9:3.15:0,3,61	0/0:23,0:18:11.12:0,11,115	0/0:4,0:14:29.31:0,29,176	0/0:2,0:12:29.36:0,29,176	0/0:3,0:12:26.43:0,26,158	1/1:13,9:25:42.10:632,42,0	0/0:1,0:13:26.46:0,26,158	1/1:5,13:19:44.14:640,44,0	1/1:4,8:17:36.04:501,36,0	0/0:1,0:10:20.32:0,20,123	1/1:4,10:17:28.32:453,28,0	1/1:5,6:13:16.27:228,16,0	0/0:3,0:17:26.39:0,26,158	1/1:4,10:17:27.07:425,27,0	0/0:4,0:17:29.31:0,29,176	1/1:3,17:25:51.11:808,51,0	1/1:5,0:11:14.48:116,14,0	1/1:4,15:28:63.09:942,63,0	1/1:1,2:3:3.01:54,3,0	1/1:1,7:9:23.95:309,24,0	0/0:3,0:16:38.21:0,38,228	0/0:0,0:6:14.71:0,15,88	1/1:2,18:24:33.07:510,33,0	1/1:4,9:18:32.52:409,33,0	1/1:7,11:20:33.11:539,33,0	1/1:1,6:12:21.01:283,21,0
chr10	33666103	.	AT	A	408.48	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.534;DP=586;FS=2.604;HRun=1;HaplotypeScore=65.7090;InbreedingCoeff=0.9979;MQ=71.77;MQ0=0;MQRankSum=-1.996;QD=29.18;ReadPosRankSum=2.403;VQSLOD=3.5593;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,120,1891	0/0:9,0:9:27.08:0,27,408	0/0:12,0:12:35.32:0,35,512	0/0:14,0:14:35.96:0,36,507	0/0:20,0:20:57.19:0,57,911	0/0:28,0:28:84.26:0,84,1293	0/0:20,0:20:60.16:0,60,889	0/0:35,0:35:99:0,102,1607	0/0:15,0:15:45.14:0,45,696	0/0:22,0:22:66.20:0,66,994	0/0:17,0:17:51.16:0,51,791	0/0:21,0:21:63.19:0,63,961	0/0:23,0:23:69.22:0,69,1076	0/0:21,0:21:63.20:0,63,980	1/1:0,14:14:36.12:503,36,0	0/0:25,0:25:72.22:0,72,1101	0/0:21,0:21:63.21:0,63,1006	0/0:11,0:11:33.11:0,33,524	0/0:11,0:11:33.10:0,33,506	0/0:28,0:28:84.27:0,84,1316	0/0:27,0:27:81.28:0,81,1293	0/0:14,0:14:42.14:0,42,670	0/0:15,0:15:45.14:0,45,695	0/0:36,0:36:99:0,108,1698	0/0:24,0:24:72.23:0,72,1128	0/0:19,0:19:57.19:0,57,890	0/0:30,0:30:90.27:0,90,1388	0/0:13,0:13:39.11:0,39,598
chr10	33667514	.	C	CAAA	11494.14	PASS	AB=0.746;AC=49;AF=0.875;AN=56;BaseQRankSum=-3.802;DP=543;FS=7.080;HRun=9;HaplotypeScore=105.9862;InbreedingCoeff=0.3804;MQ=58.33;MQ0=6;MQRankSum=2.980;QD=22.28;ReadPosRankSum=-0.493;VQSLOD=2.7733;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:24:41.10:445,41,0	1/1:0,10:12:30.04:494,30,0	0/0:14,0:7:2.11:0,2,109	0/0:11,0:9:5.58:0,6,48	0/1:9,0:23:5.27:57,0,5	1/1:12,0:24:22.16:69,22,0	1/1:2,0:9:8.72:19,9,0	1/1:6,17:26:53.42:658,53,0	1/1:5,0:12:14.77:51,15,0	1/1:5,19:23:59.64:982,60,0	1/1:5,21:26:52.98:908,53,0	1/1:3,0:17:13.20:95,13,0	1/1:2,20:23:40.64:699,41,0	1/1:6,5:12:29.91:472,30,0	0/1:23,0:23:4.65:199,0,5	1/1:3,13:17:15.05:292,15,0	0/1:6,0:16:9.81:10,0,57	1/1:1,14:14:21.07:414,21,0	1/1:14,4:20:45.35:583,45,0	1/1:4,26:31:78.06:1248,78,0	1/1:1,4:5:3.01:59,3,0	1/1:4,13:19:35.99:559,36,0	1/1:3,0:25:44.83:345,45,0	1/1:6,0:17:32.71:237,33,0	1/1:1,23:25:24.08:473,24,0	1/1:2,29:34:96.09:1461,96,0	1/1:5,12:19:18.04:319,18,0	1/1:1,8:9:18.06:344,18,0
chr10	33667533	.	AAAAC	A	531.12	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=5.747;DP=510;FS=1.330;HRun=0;HaplotypeScore=142.2792;InbreedingCoeff=0.5043;MQ=59.73;MQ0=7;MQRankSum=-5.335;QD=12.95;ReadPosRankSum=-3.942;VQSLOD=2.4117;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:21:18.40:18,0,965	0/0:10,0:10:27.08:0,27,563	0/0:12,0:9:21.36:0,21,242	0/0:13,0:9:0.83:0,1,126	0/0:23,0:23:69.23:0,69,1384	0/0:17,0:17:51.16:0,51,928	0/0:9,0:8:21.06:0,21,376	0/0:26,0:25:64.57:0,65,1362	0/0:11,0:11:33.10:0,33,619	0/0:31,0:28:56.34:0,56,1430	0/0:24,0:24:44.90:0,45,1111	0/0:11,0:11:15.05:0,15,337	0/0:23,0:23:42.49:0,42,804	0/0:12,0:12:24.77:0,25,516	1/1:9,10:19:43.36:618,43,0	0/0:12,0:11:15.73:0,16,362	0/0:21,0:20:33.32:0,33,993	0/0:15,0:15:28.21:0,28,610	0/0:23,0:22:54.17:0,54,1045	0/0:31,0:31:85.33:0,85,2004	0/0:5,0:4:6.02:0,6,155	0/0:17,0:17:36.94:0,37,986	0/0:23,0:23:50.96:0,51,1181	0/0:15,0:14:34.88:0,35,583	0/0:24,0:24:41.62:0,42,867	0/0:31,0:31:78.25:0,78,1855	0/0:19,0:19:33.43:0,33,742	0/0:11,0:10:24.08:0,24,617
chr10	33667537	.	CAAAACAAAACA	C	601.18	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.121;DP=492;FS=2.067;HRun=0;HaplotypeScore=194.1911;InbreedingCoeff=0.8460;MQ=59.54;MQ0=9;MQRankSum=-4.165;QD=35.36;ReadPosRankSum=0.014;VQSLOD=3.5183;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:21:53.83:0,54,1983	0/0:9,0:9:24.05:0,24,901	0/0:11,0:9:19.78:0,20,405	0/0:12,0:9:11.56:0,12,152	0/0:24,0:23:69.24:0,69,2374	0/0:18,0:17:45.12:0,45,1397	0/0:9,0:8:21.05:0,21,589	0/0:27,0:26:66.96:0,67,2443	0/0:11,0:11:30.05:0,30,971	0/0:29,0:26:67.96:0,68,2663	0/0:24,0:24:52.96:0,53,1919	0/0:11,0:11:15.05:0,15,659	0/0:22,0:22:41.88:0,42,1276	0/0:9,0:9:27.05:0,27,859	1/1:12,5:17:38.45:696,38,0	0/0:12,0:11:15.66:0,16,631	0/0:20,0:19:10.71:0,11,1540	0/0:16,0:16:33.07:0,33,1199	0/0:21,0:20:53.17:0,53,1907	0/0:30,0:30:87.27:0,87,3584	0/0:5,0:5:9.03:0,9,340	0/0:17,0:17:48.15:0,48,1782	0/0:19,0:19:45.15:0,45,2094	0/0:15,0:14:25.57:0,26,946	0/0:24,0:24:27.94:0,28,1460	0/0:28,0:28:75.24:0,75,3229	0/0:18,0:18:32.78:0,33,1340	0/0:11,0:10:24.08:0,24,1223
chr10	33667547	.	CAA	C	1549.29	PASS	AB=0.588;AC=9;AF=0.161;AN=56;BaseQRankSum=1.077;DP=489;FS=9.617;HRun=11;HaplotypeScore=104.8549;InbreedingCoeff=0.8510;MQ=61.96;MQ0=4;MQRankSum=-3.138;QD=18.23;ReadPosRankSum=3.946;VQSLOD=1.9678;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:23:55.78:0,56,484	0/0:6,0:7:20.51:0,21,241	0/0:13,0:9:24.05:0,24,281	0/0:12,0:10:10.11:0,10,108	1/1:1,23:24:60.11:693,60,0	1/1:1,16:16:36.09:383,36,0	0/1:3,6:9:3.36:76,0,3	0/0:32,0:31:74.78:0,75,1038	1/1:2,8:10:21.02:223,21,0	0/0:27,0:26:72.22:0,72,1063	0/0:24,0:25:54.04:0,54,722	0/0:10,0:10:12.03:0,12,165	0/0:18,0:20:26.53:0,27,339	0/0:8,0:8:13.60:0,14,188	0/0:16,0:16:19.33:0,19,78	0/0:11,0:12:12.20:0,12,187	1/1:9,14:22:22.08:337,22,0	0/0:16,0:16:30.01:0,30,389	0/0:19,0:19:44.63:0,45,628	0/0:31,0:31:78.09:0,78,1120	0/0:5,0:5:6.02:0,6,92	0/0:16,0:18:45.12:0,45,627	0/0:19,0:20:44.64:0,45,650	0/0:10,0:10:15.51:0,16,211	0/0:21,0:21:24.08:0,24,366	0/0:28,0:28:72.17:0,72,1031	0/0:19,0:19:39.11:0,39,564	0/0:11,0:11:29.57:0,30,396
chr10	33668278	.	CAGATAGGT	C	1092.80	PASS	AB=1.000;AC=10;AF=0.179;AN=56;BaseQRankSum=4.310;DP=681;FS=1.098;HRun=0;HaplotypeScore=269.2462;InbreedingCoeff=0.0217;MQ=65.66;MQ0=1;MQRankSum=2.448;QD=5.94;ReadPosRankSum=-1.021;VQSLOD=1.9087;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:78.54:0,79,1845	0/0:18,0:18:39.54:0,40,690	0/0:23,0:18:27.23:0,27,323	0/0:12,0:11:26.85:0,27,227	0/1:22,0:22:99:132,0,359	0/1:37,0:38:99:136,0,859	0/1:18,0:18:92.92:93,0,323	0/0:54,0:53:99:0,153,1881	0/1:18,0:18:38.85:39,0,766	0/0:36,0:36:99:0,102,2447	0/0:26,0:26:42.55:0,43,1038	0/1:23,0:23:99:230,0,438	0/0:29,0:29:47.36:0,47,694	0/0:22,0:22:32.31:0,32,739	1/1:7,4:11:18.06:449,18,0	0/0:20,0:20:25.97:0,26,893	0/1:15,0:15:72.03:72,0,278	0/0:17,0:17:24.61:0,25,611	0/0:16,0:16:42.05:0,42,769	0/0:47,0:47:84.12:0,84,1338	0/0:16,0:16:20.91:0,21,246	0/0:24,0:24:39:0,39,887	0/1:28,0:28:16.85:17,0,458	0/1:11,0:11:75.92:76,0,190	0/0:30,0:30:59.65:0,60,1272	0/0:31,0:31:75.13:0,75,1628	0/0:29,0:29:50.79:0,51,868	0/0:13,0:13:15.02:0,15,305
chr10	33668284	.	G	GATA	951.04	PASS	AB=0.902;AC=8;AF=0.143;AN=56;BaseQRankSum=7.005;DP=690;FS=1.165;HRun=0;HaplotypeScore=227.3446;InbreedingCoeff=0.0990;MQ=64.10;MQ0=2;MQRankSum=-0.386;QD=6.14;ReadPosRankSum=-0.412;VQSLOD=2.9406;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:77.79:0,78,1159	0/0:16,0:16:34.83:0,35,598	0/0:22,0:17:34.16:0,34,622	0/0:11,0:10:27.08:0,27,450	0/1:20,3:23:99:169,0,129	0/1:35,5:40:99:184,0,158	0/1:16,0:16:36.57:104,0,37	0/0:65,0:63:99:0,191,2832	1/1:14,5:19:9.98:365,10,0	0/0:35,0:35:73.77:0,74,1286	0/0:28,0:28:32.20:0,32,573	0/0:27,0:27:18.47:0,18,281	0/0:29,0:29:27.89:0,28,544	0/0:22,0:22:22.57:0,23,391	0/0:12,0:12:17.84:0,18,146	0/0:21,0:21:42.01:0,42,545	0/1:17,1:17:61.57:62,0,68	0/0:17,0:17:42.48:0,42,644	0/0:14,0:14:41.32:0,41,625	0/0:46,0:46:78.23:0,78,1246	0/0:17,0:17:20.68:0,21,237	0/0:21,0:21:29.01:0,29,523	0/1:17,8:25:24.82:129,0,25	0/1:13,1:14:66.95:77,0,67	0/0:31,0:31:52.46:0,52,718	0/0:27,0:27:76.47:0,76,1060	0/0:27,0:27:39.46:0,39,633	0/0:13,0:13:13.28:0,13,191
chr10	33668285	.	G	GA	72.85	PASS	AB=0.842;AC=4;AF=0.071;AN=56;BaseQRankSum=3.727;DP=691;FS=2.860;HRun=0;HaplotypeScore=213.7539;InbreedingCoeff=-0.0821;MQ=64.10;MQ0=2;MQRankSum=-1.156;QD=0.90;ReadPosRankSum=1.531;VQSLOD=2.8221;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:35:70.12:0,70,861	0/0:16,0:16:38.32:0,38,480	0/0:22,0:17:48.09:0,48,596	0/0:11,0:10:27.04:0,27,355	0/1:20,3:23:22.26:22,0,111	0/0:35,0:40:16.63:0,17,176	0/0:17,0:17:24.36:0,24,125	0/0:65,0:63:99:0,143,2099	0/1:14,5:19:66.77:108,0,67	0/0:33,0:33:87.78:0,88,1038	0/0:28,0:28:39.17:0,39,484	0/0:27,0:27:47.91:0,48,229	0/0:28,0:28:44.61:0,45,507	0/0:23,0:23:24.52:0,25,312	0/0:12,0:12:16.17:0,16,74	0/0:21,0:21:35.95:0,36,377	0/0:17,1:17:10.49:0,10,100	0/0:17,0:17:38.14:0,38,459	0/0:13,0:13:39.06:0,39,516	0/0:49,0:49:78.79:0,79,1063	0/0:16,0:16:9.50:0,10,125	0/0:21,0:21:34.32:0,34,422	0/1:17,8:25:34.25:34,0,56	0/1:13,1:14:17.15:17,0,64	0/0:30,0:30:43.34:0,43,505	0/0:27,0:27:77.17:0,77,886	0/0:28,0:28:48.36:0,48,552	0/0:13,0:13:14.22:0,14,152
chr10	33668322	.	T	TAGATAGATAGAC	10829.52	PASS	AB=0.992;AC=38;AF=0.679;AN=56;BaseQRankSum=-5.299;DP=721;FS=0.000;HRun=0;HaplotypeScore=285.4844;InbreedingCoeff=0.4389;MQ=51.95;MQ0=5;MQRankSum=-3.784;QD=18.17;ReadPosRankSum=1.106;VQSLOD=3.3435;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:36:26.24:0,26,283	1/1:9,2:11:17.98:495,18,0	0/0:16,0:11:29.95:0,30,280	0/0:10,0:5:8.95:0,9,76	0/1:25,0:25:14.85:15,0,24	1/1:31,0:32:8.58:652,9,0	0/1:20,0:20:99:138,0,189	1/1:56,0:53:99:1166,134,0	0/1:26,0:26:32.81:94,0,33	1/1:23,3:26:72.12:1520,72,0	1/1:24,4:29:21.07:605,21,0	0/0:28,0:28:24.05:0,24,391	1/1:39,3:42:17.79:583,18,0	1/1:26,0:28:18.04:455,18,0	0/0:13,0:13:13.10:0,13,175	1/1:20,4:24:7.93:773,8,0	0/1:17,0:16:13.04:33,0,13	1/1:17,0:17:11.96:330,12,0	1/1:18,0:17:34.68:349,35,0	1/1:50,0:50:23.98:423,24,0	1/1:26,0:26:8.96:69,9,0	1/1:19,3:22:20.38:557,20,0	0/0:22,0:22:3.33:0,3,53	0/1:16,0:16:14.95:15,0,163	1/1:28,2:30:30.05:710,30,0	1/1:26,2:28:74.91:1142,75,0	1/1:33,0:33:27:418,27,0	0/1:18,1:19:17.32:288,0,17
chr10	33668358	.	TTGCA	T	8260.39	PASS	AB=0.780;AC=40;AF=0.714;AN=56;BaseQRankSum=1.003;DP=671;FS=3.816;HRun=0;HaplotypeScore=201.6442;InbreedingCoeff=0.8371;MQ=63.24;MQ0=2;MQRankSum=-3.638;QD=16.04;ReadPosRankSum=3.256;VQSLOD=4.1175;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:6,22:28:15.94:502,0,16	1/1:11,0:11:21.07:263,21,0	0/0:28,0:24:37.88:0,38,453	0/0:26,0:19:37.75:0,38,416	0/0:29,0:29:26.19:0,26,259	0/0:30,0:30:34.68:0,35,552	0/0:13,0:13:35.93:0,36,310	1/1:37,0:37:92.99:837,93,0	0/0:20,0:20:17.85:0,18,287	1/1:26,0:26:59.94:657,60,0	1/1:22,0:22:20.93:262,21,0	1/1:1,30:31:36.12:608,36,0	1/1:44,0:44:48.56:583,49,0	1/1:23,0:23:27.49:319,27,0	1/1:13,0:13:20.24:204,20,0	1/1:27,0:27:41.96:508,42,0	0/0:10,0:10:2.94:0,3,18	1/1:10,0:10:9.03:113,9,0	1/1:12,0:12:32.78:292,33,0	1/1:39,0:38:31.81:349,32,0	0/1:31,0:31:0:0,0,0	1/1:22,0:22:18.56:200,19,0	1/1:5,21:26:36.12:662,36,0	1/1:10,4:14:29.95:355,30,0	1/1:27,1:28:37:452,37,0	1/1:24,0:24:56.73:604,57,0	1/1:31,0:31:24.01:281,24,0	1/1:16,0:16:17.99:207,18,0
chr10	33668360	.	GCATGCATA	G	12935.60	PASS	AB=0.978;AC=35;AF=0.648;AN=54;BaseQRankSum=-3.467;DP=672;FS=11.096;HRun=0;HaplotypeScore=211.0324;InbreedingCoeff=0.7140;MQ=60.98;MQ0=2;MQRankSum=-5.674;QD=28.56;ReadPosRankSum=2.175;VQSLOD=3.6365;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:26,1:27:45.80:46,0,208	1/1:2,7:9:21.07:589,21,0	0/0:24,0:20:37.88:0,38,453	0/0:23,0:18:37.71:0,38,416	0/0:3,0:32:26.99:0,27,624	0/0:10,0:33:36.11:0,36,1094	0/0:16,0:16:38.94:0,39,464	1/1:35,0:35:90.10:874,90,0	0/0:6,0:23:17.85:0,18,552	1/1:2,24:26:68.94:1379,69,0	1/1:1,20:22:26.36:621,26,0	0/1:30,1:31:49.33:49,0,140	1/1:1,42:43:51.17:1355,51,0	1/1:1,22:23:30.10:766,30,0	1/1:1,0:14:21.07:398,21,0	1/1:1,27:28:42.01:1151,42,0	0/0:3,0:11:2.94:0,3,18	1/1:0,10:10:9.03:253,9,0	1/1:0,12:12:32.77:409,33,0	1/1:0,38:38:45.15:1000,45,0	./.	1/1:1,21:22:29.91:626,30,0	0/0:24,0:24:34.32:0,34,185	0/1:14,0:14:41.69:92,0,42	1/1:3,25:28:39.13:1046,39,0	1/1:2,21:24:62.73:1216,63,0	1/1:6,25:31:24.08:626,24,0	1/1:2,14:16:18.01:440,18,0
chr10	33669032	.	C	CA	15139.23	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-10.062;DP=563;FS=1.564;HRun=2;HaplotypeScore=87.4657;InbreedingCoeff=0.9475;MQ=76.19;MQ0=0;MQRankSum=-3.458;QD=38.52;ReadPosRankSum=1.037;VQSLOD=5.2777;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:66.21:0,66,818	1/1:0,5:5:12.04:173,12,0	0/0:12,0:12:1.12:0,1,287	0/0:12,0:12:10.07:0,10,177	0/0:28,0:28:81.25:0,81,1004	0/0:29,0:29:81.25:0,81,1004	0/0:17,0:17:45.14:0,45,557	1/1:3,22:25:66.21:932,66,0	0/0:14,0:14:39.12:0,39,483	1/1:0,13:13:39.12:545,39,0	1/1:0,17:17:48.12:668,48,0	1/1:2,20:22:57.19:821,57,0	1/1:1,14:15:42.14:605,42,0	1/1:0,19:20:54.15:751,54,0	1/1:0,15:15:45.15:648,45,0	1/1:0,26:26:75.25:1080,75,0	0/0:35,1:36:59.70:0,60,1185	1/1:1,14:15:33.11:475,33,0	1/1:4,21:25:66.21:927,66,0	1/1:2,22:24:66.22:950,66,0	1/1:0,21:21:63.21:907,63,0	1/1:0,9:9:24.08:346,24,0	1/1:2,16:18:48.16:691,48,0	1/1:2,21:23:48.16:691,48,0	1/1:1,21:22:57.19:821,57,0	1/1:1,29:30:87.29:1250,87,0	1/1:2,36:38:99:1426,99,0	1/1:0,10:10:30.10:432,30,0
chr10	33670736	.	CCAATAGGT	C	26678.61	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=10.785;DP=550;FS=1.903;HRun=0;HaplotypeScore=169.0094;InbreedingCoeff=0.9859;MQ=82.20;MQ0=0;MQRankSum=-14.461;QD=60.09;ReadPosRankSum=5.044;VQSLOD=5.0343;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,126,5467	1/1:0,8:8:24.08:702,24,0	0/0:24,0:24:66.03:0,66,2445	0/0:22,0:22:55.94:0,56,2129	1/1:0,25:25:33.04:965,33,0	1/1:0,18:18:45.15:1317,45,0	1/1:2,23:25:57.15:1600,57,0	1/1:2,16:18:48.16:1329,48,0	1/1:2,26:28:69.19:1952,69,0	1/1:2,18:20:57.16:1492,57,0	1/1:0,11:11:15.05:439,15,0	1/1:2,16:18:39.13:1141,39,0	1/1:2,24:26:63.22:1844,63,0	1/1:0,13:13:33.11:966,33,0	0/0:16,0:16:45.15:0,45,2005	1/1:4,16:20:39.13:1140,39,0	1/1:6,11:17:27.09:790,27,0	1/1:3,12:15:30.10:853,30,0	1/1:1,21:22:63.07:1647,63,0	1/1:3,19:22:33.07:885,33,0	1/1:3,11:14:18.06:526,18,0	1/1:0,13:13:21.03:547,21,0	1/1:2,17:19:35.96:1002,36,0	1/1:6,14:20:24.08:702,24,0	1/1:2,13:15:30.10:878,30,0	1/1:4,25:29:78.25:2176,78,0	1/1:1,22:23:48.16:1346,48,0	1/1:0,5:5:15.05:439,15,0
chr10	33671579	.	AC	A	11458.32	PASS	AB=0.957;AC=49;AF=0.875;AN=56;BaseQRankSum=-11.597;DP=628;FS=7.166;HRun=9;HaplotypeScore=74.9731;InbreedingCoeff=0.8613;MQ=76.25;MQ0=0;MQRankSum=-2.345;QD=20.68;ReadPosRankSum=3.799;VQSLOD=5.4607;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:62.60:0,63,242	1/1:2,10:12:27.01:247,27,0	0/1:21,1:20:7.41:7,0,324	0/0:17,0:17:26.06:0,26,243	1/1:1,13:14:39.02:356,39,0	1/1:5,25:30:69.03:631,69,0	1/1:2,28:30:75.04:686,75,0	1/1:8,16:24:41.98:380,42,0	1/1:3,18:21:54.03:494,54,0	1/1:3,7:10:20.99:188,21,0	1/1:3,12:15:39.02:356,39,0	1/1:2,20:22:51.03:467,51,0	1/1:2,18:20:45.02:412,45,0	1/1:1,18:19:42.01:384,42,0	0/0:25,0:25:57.02:0,57,211	1/1:5,21:26:54.02:494,54,0	1/1:3,36:39:99:933,102,0	1/1:4,16:20:48.02:439,48,0	1/1:7,20:27:41.25:527,41,0	1/1:5,17:22:48:439,48,0	1/1:3,28:31:75.04:686,75,0	1/1:1,20:21:51.03:466,51,0	1/1:2,20:22:57.03:521,57,0	1/1:2,20:22:57.03:522,57,0	1/1:6,23:29:69.03:628,69,0	1/1:10,16:26:53.93:479,54,0	1/1:3,20:23:57.03:521,57,0	1/1:0,7:7:21.01:192,21,0
chr10	33671587	.	C	CT	1804.70	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=-10.447;DP=614;FS=2.409;HRun=0;HaplotypeScore=105.7777;InbreedingCoeff=0.7623;MQ=72.00;MQ0=0;MQRankSum=-1.192;QD=24.06;ReadPosRankSum=-1.043;VQSLOD=4.3212;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,26:27:53.44:981,53,0	0/0:11,0:11:25.57:0,26,126	0/0:20,0:19:36.15:0,36,538	0/0:16,0:15:31.72:0,32,443	0/0:19,0:19:51.92:0,52,313	0/0:28,0:28:71.28:0,71,366	0/0:30,0:30:77.02:0,77,405	0/1:22,0:22:5.26:5,0,214	0/0:20,0:20:51.13:0,51,254	0/0:10,0:10:5.60:0,6,145	0/0:15,0:15:9.97:0,10,143	0/0:22,0:22:51.29:0,51,264	0/0:18,0:18:42.61:0,43,212	0/0:21,0:21:45.77:0,46,249	1/1:0,26:26:66.22:943,66,0	0/0:22,0:22:54.13:0,54,279	0/0:39,0:39:99:0,102,510	0/0:19,0:19:54.41:0,54,294	0/0:25,0:25:66.73:0,67,387	0/0:21,0:21:54.42:0,54,299	0/0:30,0:30:74.01:0,74,376	0/0:21,0:21:48.33:0,48,240	0/0:21,0:21:53.97:0,54,268	0/0:25,0:25:68.97:0,69,395	0/0:31,0:31:77.41:0,77,434	0/0:23,0:23:18.07:0,18,276	0/0:24,0:24:62.92:0,63,339	0/0:8,0:8:22.88:0,23,125
chr10	33672177	.	GGA	G	13924.56	PASS	AB=0.946;AC=53;AF=0.946;AN=56;BaseQRankSum=-1.949;DP=587;FS=8.535;HRun=0;HaplotypeScore=84.2421;InbreedingCoeff=0.6326;MQ=76.61;MQ0=1;MQRankSum=-3.837;QD=24.56;ReadPosRankSum=6.090;VQSLOD=5.2730;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,19:25:64.99:761,65,0	1/1:2,2:4:11.87:124,12,0	0/1:33,2:30:19.78:20,0,580	0/0:20,0:19:30.02:0,30,425	1/1:2,14:18:44.80:503,45,0	1/1:5,11:16:27.08:330,27,0	1/1:3,15:18:39.12:477,39,0	1/1:8,26:35:81.06:942,81,0	1/1:6,17:23:45.14:550,45,0	1/1:4,16:20:48.13:563,48,0	1/1:1,16:18:44.97:527,45,0	1/1:5,23:29:63.03:747,63,0	1/1:1,22:23:57.18:697,57,0	1/1:3,21:25:50.99:600,51,0	1/1:6,16:23:50.99:601,51,0	1/1:2,14:16:30.09:367,30,0	1/1:1,15:18:47.19:540,47,0	1/1:1,7:8:21.07:257,21,0	1/1:7,12:19:36.11:439,36,0	1/1:5,28:35:86.81:966,87,0	1/1:5,11:18:32.77:358,33,0	1/1:3,18:21:42.13:513,42,0	1/1:2,12:13:27.08:330,27,0	1/1:7,14:21:36.11:440,36,0	1/1:4,22:26:51.05:623,51,0	1/1:5,17:22:51.16:623,51,0	1/1:3,27:30:63.03:770,63,0	1/1:1,6:7:21.07:257,21,0
chr10	33672260	.	T	TG	2344.97	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-7.629;DP=674;FS=1.102;HRun=1;HaplotypeScore=75.8761;InbreedingCoeff=0.9989;MQ=73.30;MQ0=1;MQRankSum=-4.946;QD=39.75;ReadPosRankSum=0.300;VQSLOD=4.1564;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,32:36:99:1523,102,0	0/0:10,0:10:27.09:0,27,351	0/0:21,0:20:60.19:0,60,775	0/0:15,0:13:30.09:0,30,374	0/0:39,0:39:99:0,114,1478	0/0:23,0:23:60.19:0,60,779	0/0:29,0:29:84.27:0,84,1090	0/0:37,0:37:99:0,111,1441	0/0:25,0:25:69.21:0,69,871	0/0:25,0:25:72.23:0,72,925	0/0:23,0:23:69.21:0,69,876	0/0:18,0:18:48.14:0,48,609	0/0:27,0:27:69.22:0,69,896	0/0:28,0:28:78.25:0,78,1013	1/1:1,22:23:63.21:944,63,0	0/0:27,0:27:69.21:0,69,882	0/0:27,0:27:78.24:0,78,998	0/0:11,0:11:30.10:0,30,387	0/0:21,0:21:63.19:0,63,805	0/0:24,0:24:66.21:0,66,857	0/0:15,0:15:45.15:0,45,584	0/0:30,0:30:90.29:0,90,1160	0/0:20,0:19:54.18:0,54,701	0/0:13,0:13:39.13:0,39,506	0/0:28,0:28:78.25:0,78,1013	0/0:33,0:33:99:0,99,1260	0/0:32,0:32:93.30:0,93,1208	0/0:14,0:14:42.14:0,42,545
chr10	33673133	.	CTGT	C	1494.67	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.121;DP=727;FS=7.958;HRun=0;HaplotypeScore=103.3100;InbreedingCoeff=0.9972;MQ=80.95;MQ0=0;MQRankSum=-2.818;QD=40.40;ReadPosRankSum=2.315;VQSLOD=5.0835;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,37:37:96.20:1590,96,0	0/0:10,0:10:30.09:0,30,663	0/0:23,0:23:58.54:0,59,1198	0/0:17,0:16:47.98:0,48,771	0/0:32,0:32:93.32:0,93,2198	0/0:31,0:31:87.29:0,87,2012	0/0:22,0:22:66.21:0,66,1513	0/0:24,0:24:72.25:0,72,1673	0/0:30,0:30:90.28:0,90,2019	0/0:39,0:39:99:0,117,2559	0/0:13,0:13:36.11:0,36,799	0/0:31,0:31:93.31:0,93,2129	0/0:36,0:36:99:0,105,2282	0/0:28,0:28:84.26:0,84,1846	0/0:31,0:31:68.31:0,68,1217	0/0:33,0:33:99:0,99,2229	0/0:19,0:19:57.17:0,57,1300	0/0:14,0:14:36.12:0,36,834	0/0:20,0:20:60.19:0,60,1348	0/0:26,0:26:78.24:0,78,1753	0/0:24,0:24:69.22:0,69,1529	0/0:26,0:26:75.23:0,75,1667	0/0:14,0:14:42.13:0,42,886	0/0:27,0:26:81.24:0,81,1807	0/0:29,0:29:87.27:0,87,1942	0/0:29,0:29:87.30:0,87,2019	0/0:54,0:53:99:0,163,3802	0/0:8,0:8:24.08:0,24,567
chr10	33673682	.	A	AGATG	32081.81	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=7.170;DP=640;FS=1.940;HRun=0;HaplotypeScore=161.8678;InbreedingCoeff=0.9594;MQ=75.59;MQ0=3;MQRankSum=-12.920;QD=59.08;ReadPosRankSum=2.163;VQSLOD=6.5297;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,154,2805	1/1:4,6:10:30.08:637,30,0	0/0:26,0:26:67.97:0,68,1255	0/0:17,0:17:44.68:0,45,714	1/1:6,19:25:54.14:1285,54,0	1/1:3,19:21:54.17:1379,54,0	1/1:3,12:15:42.14:1068,42,0	1/1:15,18:34:99:2086,102,0	1/1:4,13:17:48.11:1145,48,0	1/1:9,24:36:99:2474,99,0	1/1:7,18:24:42.14:1083,42,0	1/1:4,15:21:54.18:1350,54,0	1/1:7,12:20:48.05:1052,48,0	1/1:3,18:21:60.21:1572,60,0	1/1:1,28:29:66.18:1702,66,0	1/1:6,25:32:84.25:2125,84,0	1/1:6,13:18:48.01:1066,48,0	1/1:3,3:7:18.04:405,18,0	1/1:9,5:14:36.05:637,36,0	1/1:7,14:23:57.14:1358,57,0	1/1:4,9:13:21.07:565,21,0	1/1:6,17:24:45.15:1200,45,0	1/1:4,23:27:57.18:1477,57,0	1/1:9,14:23:44.74:1159,45,0	1/1:6,14:20:45.15:1211,45,0	1/1:10,19:29:87.08:1909,87,0	1/1:12,22:33:87.20:1974,87,0	1/1:0,2:2:6.02:162,6,0
chr10	33673699	.	CG	C	18956.48	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=10.519;DP=600;FS=0.845;HRun=1;HaplotypeScore=160.3565;InbreedingCoeff=0.9930;MQ=75.01;MQ0=0;MQRankSum=-11.678;QD=38.61;ReadPosRankSum=0.650;VQSLOD=4.4189;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,1:47:99:0,125,2065	1/1:0,9:9:27.09:377,27,0	0/0:18,0:18:48.04:0,48,709	0/0:19,0:19:45.09:0,45,611	1/1:0,30:30:72.24:1004,72,0	1/1:0,25:25:72.24:996,72,0	1/1:0,18:18:48.16:670,48,0	1/1:0,24:24:72.24:1006,72,0	1/1:0,15:15:45.15:628,45,0	1/1:1,27:28:81.27:1130,81,0	1/1:1,21:22:60.20:837,60,0	1/1:0,16:16:45.15:628,45,0	1/1:0,17:17:45.15:627,45,0	1/1:0,19:19:57.19:795,57,0	0/0:25,0:25:69.20:0,69,1053	1/1:0,27:27:81.27:1130,81,0	1/1:0,15:15:39.13:537,39,0	1/1:0,7:7:21.07:293,21,0	1/1:0,19:19:57.16:762,57,0	1/1:0,25:25:69.23:963,69,0	1/1:0,10:10:21.05:293,21,0	1/1:0,24:24:66.22:920,66,0	1/1:0,34:34:87.08:1214,87,0	1/1:1,18:19:39.04:544,39,0	1/1:0,20:20:54.18:754,54,0	1/1:0,29:29:87.29:1215,87,0	1/1:0,34:34:99:1420,102,0	1/1:0,5:5:15.05:210,15,0
chr10	33674795	.	A	ATC	24151.28	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-4.146;DP=585;FS=7.919;HRun=0;HaplotypeScore=111.1720;InbreedingCoeff=0.9921;MQ=74.14;MQ0=1;MQRankSum=-3.408;QD=46.80;ReadPosRankSum=3.072;VQSLOD=5.8418;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:37:72.07:0,72,254	1/1:0,6:6:15.05:281,15,0	0/0:19,0:18:44.97:0,45,576	0/0:13,0:10:27:0,27,352	1/1:1,42:44:99:2176,120,0	1/1:0,20:20:60.21:1123,60,0	1/1:1,18:19:51.17:954,51,0	1/1:0,21:21:63.18:1079,63,0	1/1:0,24:24:60.20:1103,60,0	1/1:1,21:22:60.16:1059,60,0	1/1:1,16:17:51.09:909,51,0	1/1:1,17:18:42.14:782,42,0	1/1:0,20:20:48.16:897,48,0	1/1:0,19:19:54.19:1009,54,0	1/1:0,24:24:60.21:1123,60,0	1/1:2,18:20:45.15:842,45,0	1/1:0,16:16:39.13:730,39,0	1/1:0,22:24:51.17:941,51,0	1/1:1,18:19:51.17:943,51,0	1/1:1,32:33:90.17:1600,90,0	1/1:1,12:13:21.07:393,21,0	1/1:2,18:20:54.13:951,54,0	1/1:1,20:21:48.16:899,48,0	1/1:1,15:17:36.12:673,36,0	1/1:1,19:20:51.17:944,51,0	1/1:1,22:23:66.16:1137,66,0	1/1:2,23:24:62.86:1099,63,0	1/1:0,11:11:27.09:504,27,0
chr10	33674917	.	G	GTCTC	35168.15	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-6.723;DP=559;FS=3.074;HRun=0;HaplotypeScore=79.5701;InbreedingCoeff=0.9911;MQ=70.83;MQ0=0;MQRankSum=-6.052;QD=65.73;ReadPosRankSum=4.356;VQSLOD=7.2268;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,20:26:66.20:1754,66,0	1/1:0,10:10:21.07:586,21,0	0/0:10,0:10:27.07:0,27,449	0/0:13,0:14:32.46:0,32,484	1/1:5,20:27:57.20:1549,57,0	1/1:1,17:18:42.14:1174,42,0	1/1:1,15:17:39.13:1088,39,0	1/1:5,18:27:78.22:1937,78,0	1/1:2,20:24:54.19:1480,54,0	1/1:2,27:30:87.23:2275,87,0	1/1:0,19:20:51.18:1420,51,0	1/1:1,14:18:39.13:1074,39,0	1/1:1,23:25:63.69:1714,64,0	1/1:0,15:15:33.11:920,33,0	1/1:1,21:25:48.16:1337,48,0	1/1:3,18:22:60.11:1622,60,0	1/1:2,26:29:69.24:1914,69,0	1/1:0,13:13:27.09:754,27,0	1/1:4,11:15:42.12:1084,42,0	1/1:1,22:24:60.21:1663,60,0	1/1:1,8:9:24.08:660,24,0	1/1:1,14:16:33.11:912,33,0	1/1:1,17:19:45.15:1246,45,0	1/1:1,14:15:33.11:911,33,0	1/1:1,29:32:75.26:2058,75,0	1/1:1,17:20:57.15:1465,57,0	1/1:4,25:31:74.99:2070,75,0	1/1:2,6:8:18.06:501,18,0
chr10	33676109	.	CT	C	9969.22	PASS	AB=1.000;AC=49;AF=0.875;AN=56;BaseQRankSum=-5.827;DP=612;FS=2.039;HRun=11;HaplotypeScore=81.6026;InbreedingCoeff=0.7864;MQ=70.10;MQ0=1;MQRankSum=-0.842;QD=17.71;ReadPosRankSum=3.232;VQSLOD=5.8694;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:2,0:18:33.92:0,34,185	1/1:2,9:11:26.96:222,27,0	0/1:13,0:12:5.64:6,0,157	0/0:15,0:11:1.09:0,1,131	1/1:2,21:24:61.94:498,62,0	1/1:7,20:27:62.56:504,63,0	1/1:2,19:21:38.81:320,39,0	1/1:6,18:24:53.90:439,54,0	1/1:3,14:17:38.95:320,39,0	1/1:4,28:32:54.86:650,55,0	1/1:4,14:18:29.88:245,30,0	1/1:1,22:23:56.93:468,57,0	1/1:7,33:41:75.63:725,76,0	1/1:0,20:20:47.94:394,48,0	0/0:4,0:16:34.51:0,35,199	1/1:3,23:26:62.89:511,63,0	1/1:5,15:20:41.92:345,42,0	1/1:5,5:10:19.79:153,20,0	1/1:7,13:20:15.10:272,15,0	1/1:6,22:28:37.39:509,37,0	1/1:5,14:19:38.91:320,39,0	1/1:1,19:20:56.93:468,57,0	1/1:2,19:21:18.96:362,19,0	1/1:1,14:15:38.95:320,39,0	1/1:6,22:29:55.94:449,56,0	1/1:7,21:28:59.84:485,60,0	1/1:6,30:35:74.85:610,75,0	1/1:3,16:19:30.30:373,30,0
chr10	33679802	.	A	AT	17360.16	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-8.062;DP=607;FS=7.650;HRun=7;HaplotypeScore=53.3770;InbreedingCoeff=0.9978;MQ=83.08;MQ0=0;MQRankSum=-8.104;QD=30.35;ReadPosRankSum=5.621;VQSLOD=4.5871;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,22:23:60.18:725,60,0	1/1:0,12:12:36.11:435,36,0	0/0:22,0:22:51.04:0,51,474	0/0:13,0:13:26.94:0,27,243	1/1:7,26:33:72.22:870,72,0	1/1:1,25:26:72.22:870,72,0	1/1:1,11:12:33.10:399,33,0	1/1:10,24:33:72.21:857,72,0	1/1:1,16:17:48.15:578,48,0	1/1:4,26:30:78.23:931,78,0	1/1:3,25:28:75.23:906,75,0	1/1:1,15:16:42.13:507,42,0	1/1:0,15:15:42.13:507,42,0	1/1:1,24:25:72.22:870,72,0	1/1:3,21:24:60.18:724,60,0	1/1:0,22:22:63.19:761,63,0	1/1:2,12:14:33.10:399,33,0	1/1:5,17:21:41.06:535,41,0	1/1:3,12:15:36.11:435,36,0	1/1:6,18:24:51.11:600,51,0	1/1:1,18:19:45.14:544,45,0	1/1:3,29:32:84.17:995,84,0	1/1:3,19:22:54.17:652,54,0	1/1:0,13:13:33.10:399,33,0	1/1:1,25:26:69.21:834,69,0	1/1:3,20:23:60.18:725,60,0	1/1:4,28:32:84.26:1015,84,0	1/1:3,10:13:24.03:289,24,0
chr10	33684941	.	T	TA	159.97	PASS	AC=2;AF=0.071;AN=28;BaseQRankSum=2.417;DP=564;FS=7.392;HRun=6;HaplotypeScore=21.6978;InbreedingCoeff=0.5171;MQ=23.99;MQ0=123;MQRankSum=-2.439;QD=11.43;ReadPosRankSum=1.126;VQSLOD=0.2450;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:8:3:0,3,31	0/0:10,0:8:15.03:0,15,153	./.	./.	0/0:28,0:20:17.83:0,18,183	./.	./.	./.	./.	0/0:24,0:11:33.08:0,33,337	0/0:16,0:11:8.96:0,9,92	./.	./.	./.	./.	./.	./.	./.	0/0:17,0:3:9.02:0,9,92	0/0:26,0:15:18.03:0,18,184	0/0:15,0:6:6.01:0,6,61	0/0:32,0:18:15.03:0,15,153	1/1:2,12:11:21.02:246,21,0	./.	0/0:15,0:11:12.03:0,12,122	0/0:20,0:7:21.05:0,21,214	0/0:26,0:11:6.01:0,6,61	0/0:8,0:5:3.01:0,3,31
chr10	33687570	.	T	TA	528.38	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-5.970;DP=605;FS=0.870;HRun=8;HaplotypeScore=56.4875;InbreedingCoeff=0.9845;MQ=78.34;MQ0=0;MQRankSum=1.010;QD=22.97;ReadPosRankSum=1.176;VQSLOD=4.0876;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:74.83:0,75,681	0/0:7,0:7:18.01:0,18,165	0/0:16,0:16:29.98:0,30,265	0/0:13,0:13:30.01:0,30,272	0/0:28,0:28:78.03:0,78,709	0/0:22,0:22:54.03:0,54,494	0/0:17,0:17:42.01:0,42,384	0/0:38,0:38:84:0,84,765	0/0:17,0:17:21.65:0,22,337	0/0:26,0:26:69.03:0,69,632	0/0:27,0:27:75.04:0,75,686	0/0:15,0:15:36.01:0,36,330	0/0:25,0:25:66.03:0,66,603	0/0:17,0:17:45.02:0,45,412	1/1:4,19:23:54.16:623,54,0	0/0:23,0:23:63.03:0,63,577	0/0:11,0:11:33.01:0,33,298	0/0:15,0:15:45.02:0,45,412	0/0:26,0:26:60:0,60,545	0/0:37,0:37:99:0,99,906	0/0:11,0:11:30:0,30,269	0/0:24,0:24:63:0,63,570	0/0:23,0:23:57.03:0,57,522	0/0:8,0:8:24.01:0,24,220	0/0:28,0:28:72.02:0,72,655	0/0:35,0:35:90.01:0,90,818	0/0:32,0:32:90.03:0,90,818	0/0:13,0:13:39.02:0,39,357
chr10	33688266	.	TGG	T	10655.95	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-11.052;DP=486;FS=1.163;HRun=9;HaplotypeScore=67.9625;InbreedingCoeff=0.9901;MQ=71.62;MQ0=2;MQRankSum=-2.118;QD=25.99;ReadPosRankSum=1.679;VQSLOD=4.6612;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,23:25:52.77:657,53,0	1/1:1,10:11:24.07:280,24,0	0/0:12,0:11:18.33:0,18,285	0/0:18,0:15:20.79:0,21,257	1/1:3,14:17:21.03:245,21,0	1/1:0,12:12:27.08:315,27,0	1/1:1,12:13:21.06:245,21,0	1/1:3,23:26:66.16:748,66,0	1/1:2,14:16:36.10:419,36,0	1/1:2,13:15:36.09:410,36,0	1/1:2,26:28:63.19:734,63,0	0/0:0,0:10:22.46:0,22,79	1/1:2,14:16:36.10:419,36,0	1/1:4,17:20:42.12:489,42,0	1/1:2,19:21:42.12:489,42,0	1/1:4,12:16:33.09:384,33,0	1/1:0,10:10:24.07:279,24,0	1/1:0,7:7:18.05:210,18,0	1/1:1,12:13:36.07:398,36,0	1/1:2,16:18:42.10:488,42,0	1/1:1,18:19:54.16:629,54,0	1/1:1,25:26:60.17:699,60,0	0/0:6,0:27:49.47:0,49,174	0/0:1,0:9:19.96:0,20,70	1/1:2,13:15:33.10:384,33,0	1/1:3,15:18:45.12:514,45,0	1/1:2,27:29:63.18:733,63,0	1/1:0,18:18:42.12:489,42,0
chr10	33689648	.	G	GCACACA	4000.69	PASS	AB=0.736;AC=32;AF=0.615;AN=52;BaseQRankSum=-2.632;DP=574;FS=2.252;HRun=0;HaplotypeScore=137.6349;InbreedingCoeff=0.2748;MQ=61.22;MQ0=14;MQRankSum=-3.813;QD=10.45;ReadPosRankSum=-3.832;VQSLOD=1.9159;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:19,0:27:5.79:6,0,126	1/1:8,0:8:9.01:112,9,0	./.	./.	0/1:14,0:27:58.96:59,0,104	0/0:14,0:19:10.45:0,10,114	0/1:11,0:18:42.53:43,0,76	1/1:30,0:29:22.18:152,22,0	0/0:11,0:19:8.68:0,9,128	1/1:13,13:28:46.30:822,46,0	0/1:8,6:14:0:0,0,0	0/0:18,0:18:3.73:0,4,635	1/1:4,6:10:9.03:230,9,0	1/1:6,9:16:3.01:37,3,0	0/1:14,0:13:8.49:48,0,8	0/1:9,6:18:24.26:220,0,24	0/0:15,0:28:11.92:0,12,84	1/1:13,0:13:16.34:170,16,0	1/1:3,9:14:23.07:488,23,0	1/1:8,8:20:6.02:135,6,0	1/1:18,0:19:24.06:350,24,0	0/1:12,12:29:39.12:91,0,39	0/0:17,0:20:21.63:0,22,426	0/0:17,0:19:7.37:0,7,353	0/1:15,11:26:99:123,0,105	1/1:8,8:23:35.22:486,35,0	1/1:8,11:20:6.55:409,7,0	1/1:6,0:6:2.96:19,3,0
chr10	33689683	.	C	CACAT	1116.79	PASS	AB=1.000;AC=18;AF=0.321;AN=56;BaseQRankSum=10.031;DP=577;FS=10.169;HRun=0;HaplotypeScore=126.2070;InbreedingCoeff=-0.3147;MQ=56.39;MQ0=14;MQRankSum=-2.218;QD=3.30;ReadPosRankSum=3.615;VQSLOD=1.1946;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:20.02:0,20,315	0/1:7,0:7:20.97:21,0,29	0/0:26,0:12:36.02:0,36,338	0/0:35,0:21:56.46:0,56,531	0/1:24,0:24:67.87:68,0,216	0/0:20,0:20:30.16:0,30,351	0/1:20,0:20:55.39:55,0,202	0/0:34,0:31:11.23:0,11,501	0/0:18,0:18:22.39:0,22,283	0/1:26,0:26:99:202,0,251	0/0:13,0:13:11.95:0,12,93	0/0:21,0:21:54.07:0,54,888	0/1:13,0:13:47.93:48,0,101	0/1:19,0:19:18.38:18,0,167	1/1:3,11:14:9:187,9,0	0/1:12,0:12:73.07:98,0,73	0/1:25,0:25:1.65:2,0,220	0/1:19,0:20:15.22:15,0,166	0/1:19,0:18:57.60:58,0,218	0/1:21,0:20:52.19:52,0,165	0/1:28,0:27:84.18:84,0,225	0/1:23,0:22:20.15:20,0,117	0/0:19,0:19:51.06:0,51,690	0/0:19,0:19:48.01:0,48,614	0/1:19,0:19:44.50:44,0,286	0/1:27,0:27:99:157,0,232	0/1:20,0:19:99:149,0,158	0/0:6,0:6:8.73:0,9,60
chr10	33690897	.	G	GCC	11155.77	PASS	AB=0.536;AC=51;AF=0.911;AN=56;BaseQRankSum=-5.871;DP=510;FS=0.000;HRun=8;HaplotypeScore=65.7162;InbreedingCoeff=0.8159;MQ=93.05;MQ0=0;MQRankSum=-7.551;QD=24.15;ReadPosRankSum=3.895;VQSLOD=3.6651;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,0:34:64.63:222,65,0	1/1:2,6:8:15.05:238,15,0	0/0:25,0:25:45.06:0,45,488	0/0:23,0:23:14.95:0,15,379	1/1:2,11:14:18.06:277,18,0	1/1:3,14:17:33.11:524,33,0	1/1:4,18:22:45.15:714,45,0	1/1:10,14:26:38.56:497,39,0	1/1:4,16:22:43.38:650,43,0	1/1:4,8:14:32.08:436,32,0	1/1:4,16:20:45.15:713,45,0	0/1:2,0:15:3.11:64,0,3	1/1:3,14:18:29.59:437,30,0	1/1:0,12:12:24.08:378,24,0	1/1:4,1:22:42.94:185,43,0	1/1:1,16:18:44.64:675,45,0	1/1:3,17:20:48.16:755,48,0	1/1:2,9:11:21.07:333,21,0	1/1:5,6:12:18.06:284,18,0	1/1:5,11:18:30.02:410,30,0	1/1:3,11:14:21.07:332,21,0	1/1:1,17:18:48.16:762,48,0	1/1:2,1:14:21.49:74,21,0	1/1:2,0:18:34.81:120,35,0	1/1:4,15:20:30.09:453,30,0	1/1:6,16:23:48.14:710,48,0	1/1:4,13:17:33.11:523,33,0	1/1:4,10:15:25.90:390,26,0
chr10	33691935	.	GT	G	8133.49	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=4.840;DP=369;FS=0.747;HRun=8;HaplotypeScore=36.1063;InbreedingCoeff=0.9385;MQ=67.54;MQ0=0;MQRankSum=-1.974;QD=24.50;ReadPosRankSum=0.446;VQSLOD=4.9604;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,18:19:48.08:463,48,0	1/1:1,9:10:27.04:261,27,0	0/0:5,0:5:12.03:0,12,139	0/0:2,0:2:3.01:0,3,36	1/1:3,19:22:48.07:463,48,0	1/1:1,17:18:45.07:435,45,0	1/1:1,7:8:21.03:203,21,0	1/1:3,16:19:48.06:457,48,0	1/1:0,13:13:39.06:376,39,0	1/1:2,23:25:69.11:666,69,0	1/1:2,15:17:42.07:406,42,0	0/0:5,0:5:12.04:0,12,145	1/1:3,9:12:27.04:261,27,0	1/1:1,12:13:36.05:348,36,0	1/1:1,13:14:36.06:348,36,0	1/1:1,11:12:27.04:261,27,0	1/1:2,15:17:45.06:435,45,0	1/1:1,8:9:24.04:232,24,0	1/1:2,15:17:48.07:463,48,0	1/1:3,14:17:39.06:377,39,0	1/1:1,10:11:30.05:290,30,0	1/1:3,7:10:21.03:203,21,0	0/0:11,0:11:30.09:0,30,362	0/0:14,0:14:42.13:0,42,507	1/1:1,11:12:30.05:290,30,0	1/1:1,15:16:45.07:435,45,0	1/1:3,10:13:24.03:232,24,0	1/1:0,8:8:24.04:232,24,0
chr10	33693598	.	A	ATACT	5079.47	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=13.579;DP=501;FS=1.992;HRun=0;HaplotypeScore=134.7693;InbreedingCoeff=0.9965;MQ=86.48;MQ0=0;MQRankSum=-12.531;QD=55.82;ReadPosRankSum=1.311;VQSLOD=5.7540;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,9:11:26.65:449,27,0	0/0:6,0:6:18.05:0,18,340	0/0:24,0:23:69.22:0,69,1292	0/0:25,0:25:59.27:0,59,1078	1/1:1,11:15:33.11:688,33,0	1/1:4,12:18:54.11:1070,54,0	1/1:1,8:10:28.90:542,29,0	0/0:33,0:33:96.30:0,96,1923	1/1:1,14:15:43.70:911,44,0	0/0:31,0:31:87.29:0,87,1759	0/0:24,0:24:69.24:0,69,1411	0/0:19,0:19:57.20:0,57,1178	0/0:22,0:22:63.22:0,63,1320	0/0:19,0:19:57.20:0,57,1163	1/1:0,11:11:33.11:710,33,0	0/0:12,0:12:36.12:0,36,755	1/1:0,11:11:33.11:708,33,0	0/0:6,0:6:18.06:0,18,363	0/0:18,0:18:51.17:0,51,1020	0/0:25,0:25:72.23:0,72,1431	0/0:18,0:18:51.17:0,51,1052	0/0:12,0:12:33.10:0,33,653	0/0:20,0:20:57.17:0,57,1101	0/0:20,0:20:57.20:0,57,1187	0/0:16,0:16:48.16:0,48,991	0/0:19,0:19:54.18:0,54,1097	0/0:24,0:24:72.25:0,72,1494	0/0:17,0:17:51.18:0,51,1054
chr10	33693599	.	G	GAGTC	4569.86	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=14.119;DP=506;FS=3.311;HRun=0;HaplotypeScore=137.2288;InbreedingCoeff=0.9949;MQ=85.81;MQ0=0;MQRankSum=-13.507;QD=50.78;ReadPosRankSum=2.396;VQSLOD=5.9497;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,9:9:23.66:404,24,0	0/0:5,0:5:15.05:0,15,315	0/0:24,0:24:66.23:0,66,1261	0/0:24,0:24:66.02:0,66,1106	1/1:4,11:16:32.89:577,33,0	1/1:5,12:17:49.27:841,49,0	1/1:1,9:10:30.09:536,30,0	0/0:33,0:33:99:0,99,2005	1/1:1,14:15:45.15:881,45,0	0/0:31,0:31:87.28:0,87,1748	0/0:24,0:24:72.21:0,72,1428	0/0:20,0:20:57.18:0,57,1156	0/0:22,0:22:66.20:0,66,1331	0/0:19,0:19:57.18:0,57,1139	1/1:0,11:11:33.11:668,33,0	0/0:13,0:13:36.12:0,36,755	1/1:1,11:12:33.10:662,33,0	0/0:6,0:6:18.06:0,18,370	0/0:21,0:21:54.17:0,54,1074	0/0:26,0:26:75.24:0,75,1507	0/0:18,0:18:54.15:0,54,1054	0/0:12,0:12:33.11:0,33,675	0/0:21,0:21:57.16:0,57,1095	0/0:21,0:21:57.20:0,57,1195	0/0:16,0:16:48.16:0,48,986	0/0:18,0:18:54.19:0,54,1112	0/0:24,0:24:72.25:0,72,1490	0/0:17,0:17:51.17:0,51,1054
chr10	33693601	.	A	ATAC	5388.33	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=14.510;DP=540;FS=7.753;HRun=0;HaplotypeScore=144.6732;InbreedingCoeff=0.9954;MQ=86.11;MQ0=0;MQRankSum=-13.221;QD=44.17;ReadPosRankSum=1.185;VQSLOD=6.6387;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,9:15:28.84:531,29,0	0/0:5,0:5:15.05:0,15,256	0/0:28,0:27:56.26:0,56,1089	0/0:24,0:25:57.17:0,57,867	1/1:12,12:24:35.42:633,35,0	1/1:5,12:18:41.14:840,41,0	1/1:5,9:15:33.04:623,33,0	0/0:34,0:34:93.30:0,93,1538	1/1:3,14:18:51.17:1048,51,0	0/0:33,0:33:90.29:0,90,1484	0/0:23,0:23:69.24:0,69,1174	0/0:20,0:20:57.18:0,57,936	0/0:22,0:22:63.22:0,63,1074	0/0:17,0:17:51.17:0,51,862	1/1:6,11:17:39.13:815,39,0	0/0:13,0:13:39.12:0,39,629	1/1:4,11:15:45.15:898,45,0	0/0:6,0:6:18.06:0,18,307	0/0:21,0:21:63.21:0,63,1042	0/0:26,0:26:75.24:0,75,1253	0/0:19,0:19:51.17:0,51,869	0/0:12,0:12:33.11:0,33,552	0/0:20,0:20:57.19:0,57,945	0/0:20,0:20:60.20:0,60,1012	0/0:15,0:15:45.15:0,45,766	0/0:18,0:18:54.17:0,54,893	0/0:24,0:24:66.23:0,66,1125	0/0:17,0:17:48.13:0,48,763
chr10	33694289	.	G	GA	485.07	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-6.022;DP=569;FS=3.530;HRun=7;HaplotypeScore=50.4326;InbreedingCoeff=0.9884;MQ=80.16;MQ0=0;MQRankSum=-1.047;QD=28.53;ReadPosRankSum=1.943;VQSLOD=4.3879;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:75.12:0,75,724	0/0:9,0:9:24.04:0,24,232	0/0:19,0:19:38.48:0,38,341	0/0:13,0:13:24.03:0,24,231	0/0:42,0:42:99:0,108,1042	0/0:23,0:23:60.09:0,60,579	0/0:16,0:16:36.04:0,36,342	0/0:38,0:38:93.11:0,93,885	0/0:17,0:17:48.06:0,48,458	0/0:35,0:35:98.60:0,99,924	0/0:27,0:27:69.11:0,69,666	0/0:11,0:11:33.04:0,33,313	0/0:10,0:10:27.03:0,27,255	0/0:18,0:18:51.07:0,51,487	1/1:1,16:17:48.15:580,48,0	0/0:17,0:17:51.07:0,51,488	0/0:20,0:20:54.03:0,54,503	0/0:20,0:20:60.05:0,60,569	0/0:25,0:25:60.07:0,60,575	0/0:25,0:25:72.10:0,72,690	0/0:19,0:19:51.08:0,51,492	0/0:18,0:18:45.01:0,45,419	0/0:18,0:18:54.09:0,54,521	0/0:8,0:8:24.04:0,24,232	0/0:25,0:25:72.07:0,72,681	0/0:27,0:27:81.11:0,81,773	0/0:19,0:19:54.06:0,54,514	0/0:7,0:7:21.03:0,21,202
chr10	33694460	.	T	TG	1186.21	PASS	AB=0.786;AC=28;AF=0.500;AN=56;BaseQRankSum=-3.565;DP=343;FS=0.619;HRun=10;HaplotypeScore=49.9248;InbreedingCoeff=0.1989;MQ=79.12;MQ0=0;MQRankSum=-2.186;QD=5.47;ReadPosRankSum=-2.035;VQSLOD=0.1905;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:26.96:0,27,221	1/1:4,2:6:14.86:127,15,0	0/0:18,0:18:32.84:0,33,259	0/1:16,0:15:13.28:13,0,61	0/0:23,0:23:50.89:0,51,414	0/0:21,0:21:46.91:0,47,367	0/0:15,0:15:32.93:0,33,268	0/1:8,0:8:0:0,0,0	0/1:12,1:14:0:0,0,194	0/1:6,7:13:7.32:112,0,7	0/1:5,2:7:18.63:26,0,19	1/1:1,1:6:2.84:14,3,0	1/1:5,8:13:11.99:116,12,0	0/1:5,6:11:12.88:13,0,19	0/0:1,0:12:20.37:0,20,59	1/1:4,10:14:15.04:160,15,0	0/0:16,0:17:34.98:0,35,276	0/1:3,8:11:15.79:55,0,16	1/1:12,3:15:7.67:162,8,0	0/0:3,5:8:2.93:0,3,24	0/1:13,2:15:23.67:24,0,24	1/1:3,6:9:6.02:64,6,0	0/1:10,1:11:11.46:72,0,11	0/1:5,0:9:0:0,0,0	1/1:5,4:9:6.02:64,6,0	0/1:6,4:10:12.58:78,0,13	0/1:7,9:16:46.47:165,0,46	1/1:1,3:4:9.02:96,9,0
chr10	33695232	.	AT	A	8031.17	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=8.077;DP=573;FS=8.809;HRun=8;HaplotypeScore=68.2036;InbreedingCoeff=0.9779;MQ=72.31;MQ0=1;MQRankSum=-0.481;QD=24.79;ReadPosRankSum=0.946;VQSLOD=5.4356;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:93.27:0,93,1111	1/1:0,5:5:12.02:115,12,0	0/0:21,0:18:22.51:0,23,285	0/0:16,0:16:7.10:0,7,90	0/0:22,0:22:56.96:0,57,677	0/0:20,0:20:57.17:0,57,688	0/0:21,0:21:60.18:0,60,724	1/1:3,26:29:78.12:753,78,0	0/0:13,0:13:33.10:0,33,399	1/1:1,31:32:90.13:861,90,0	1/1:2,14:16:42.07:404,42,0	0/0:16,1:17:19.13:0,19,498	1/1:0,7:7:12.02:116,12,0	1/1:2,15:17:42.06:406,42,0	0/0:19,0:19:54.17:0,54,652	1/1:3,12:15:36.06:348,36,0	0/0:20,0:20:48.09:0,48,552	1/1:2,17:19:51.08:492,51,0	1/1:6,27:33:81.12:782,81,0	1/1:0,25:25:63.10:608,63,0	1/1:1,20:21:57.09:550,57,0	1/1:0,11:11:30.05:290,30,0	0/0:24,0:24:60.18:0,60,722	0/0:19,0:19:51.16:0,51,616	1/1:1,14:15:27.04:261,27,0	1/1:0,30:30:90.13:862,90,0	1/1:1,26:27:66.11:637,66,0	1/1:3,19:22:57.07:545,57,0
chr10	33699382	.	TC	T	9754.81	PASS	AB=0.568;AC=29;AF=0.558;AN=52;BaseQRankSum=15.104;DP=754;FS=5.498;HRun=2;HaplotypeScore=78.6470;InbreedingCoeff=0.8876;MQ=44.87;MQ0=72;MQRankSum=-0.074;QD=24.95;ReadPosRankSum=2.147;VQSLOD=4.5284;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:90.28:0,90,1295	1/1:1,9:10:11.99:156,12,0	0/0:35,0:2:3.01:0,3,44	./.	0/0:29,0:26:60.20:0,60,889	0/0:27,0:25:45.14:0,45,655	0/0:26,0:18:36.06:0,36,457	./.	0/0:24,0:23:48.12:0,48,694	0/1:10,32:39:7.35:1102,0,7	1/1:7,26:30:38.37:800,38,0	0/0:25,0:25:48.16:0,48,718	1/1:2,14:12:18.06:234,18,0	1/1:1,19:19:39.13:506,39,0	0/0:21,0:21:36.12:0,36,540	1/1:6,31:34:15.22:695,15,0	0/0:22,0:22:54.18:0,54,806	1/1:1,19:17:7.66:544,8,0	1/1:1,8:8:21.07:273,21,0	1/1:2,34:30:75.20:954,75,0	1/1:0,25:23:69.22:896,69,0	1/1:3,32:32:63.20:813,63,0	0/0:28,0:25:63.20:0,63,917	0/0:18,0:18:36.12:0,36,538	1/1:4,24:28:48.16:623,48,0	1/1:5,31:32:30.45:995,30,0	1/1:2,28:27:60.19:777,60,0	1/1:0,14:14:30.10:390,30,0
chr10	33702474	.	AC	A	3155.97	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=14.765;DP=579;FS=7.638;HRun=1;HaplotypeScore=66.2328;InbreedingCoeff=0.9989;MQ=68.43;MQ0=1;MQRankSum=1.020;QD=31.25;ReadPosRankSum=2.779;VQSLOD=2.8474;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,105,1667	0/0:12,0:12:36.12:0,36,575	0/0:13,0:12:32.85:0,33,425	0/0:14,0:14:39.05:0,39,542	1/1:2,22:24:63.16:741,63,0	1/1:1,21:22:63.19:756,63,0	1/1:1,15:16:42.13:504,42,0	0/0:30,0:30:90.28:0,90,1375	1/1:0,17:17:51.16:611,51,0	0/0:21,0:21:63.21:0,63,1007	0/0:18,0:18:54.18:0,54,861	0/0:19,0:19:57.18:0,57,886	0/0:18,0:18:54.15:0,54,836	0/0:18,0:18:54.15:0,54,816	0/0:17,0:17:51.16:0,51,791	0/0:26,0:26:78.27:0,78,1246	1/1:0,22:22:60.18:720,60,0	0/0:7,0:7:21.02:0,21,306	0/0:24,0:24:72.24:0,72,1129	0/0:29,0:29:87.28:0,87,1361	0/0:24,0:23:69.21:0,69,1073	0/0:30,0:30:90.26:0,90,1368	0/0:20,0:20:60.20:0,60,958	0/0:16,0:16:48.14:0,48,738	0/0:20,0:20:60.18:0,60,912	0/0:28,0:28:81.25:0,81,1231	0/0:24,0:24:72.17:0,72,1053	0/0:15,0:15:45.15:0,45,712
chr10	33703463	.	TTTGC	T	6173.51	PASS	AB=0.917;AC=15;AF=0.268;AN=56;BaseQRankSum=13.848;DP=625;FS=5.313;HRun=0;HaplotypeScore=98.3582;InbreedingCoeff=0.9065;MQ=70.89;MQ0=0;MQRankSum=1.103;QD=28.85;ReadPosRankSum=4.442;VQSLOD=4.5553;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,23:30:51.17:837,51,0	0/0:11,0:11:21.54:0,22,518	0/0:27,0:26:48.15:0,48,1018	0/0:13,0:12:18.06:0,18,390	1/1:3,21:23:54.18:843,54,0	1/1:2,18:20:42.14:690,42,0	1/1:8,14:22:36.12:587,36,0	0/0:29,0:29:63.17:0,63,1331	1/1:4,23:27:60.21:1003,60,0	0/0:26,0:26:60.21:0,60,1451	0/0:22,0:22:51.18:0,51,1240	0/0:20,0:20:57.18:0,57,1327	0/0:16,0:16:33.11:0,33,788	0/0:21,0:21:39.13:0,39,887	1/1:8,22:30:51.13:822,51,0	0/1:20,2:22:37.09:37,0,1248	1/1:8,31:39:81.28:1354,81,0	0/0:11,0:11:27.09:0,27,643	0/0:28,0:28:60.21:0,60,1393	0/0:19,0:19:51.18:0,51,1227	0/0:21,0:21:51.16:0,51,1152	0/0:13,0:13:33.11:0,33,789	0/0:13,0:13:30.10:0,30,702	0/0:29,0:29:78.27:0,78,1829	0/0:16,0:16:33.11:0,33,744	0/0:37,0:37:87.30:0,87,2067	0/0:25,0:25:51.18:0,51,1256	0/0:14,0:14:30.10:0,30,738
chr10	33705199	.	G	GAA	11245.77	PASS	AB=0.636;AC=51;AF=0.911;AN=56;BaseQRankSum=-2.617;DP=515;FS=14.378;HRun=10;HaplotypeScore=71.1711;InbreedingCoeff=0.7046;MQ=63.97;MQ0=6;MQRankSum=-2.966;QD=22.95;ReadPosRankSum=2.093;VQSLOD=2.6459;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,0:42:77.23:272,77,0	1/1:0,6:7:15.04:208,15,0	0/0:11,0:6:9.74:0,10,114	0/0:14,0:9:10.67:0,11,78	1/1:5,13:20:49.92:618,50,0	1/1:1,18:21:47.64:663,48,0	1/1:2,18:23:50.23:658,50,0	1/1:11,18:28:51.05:653,51,0	1/1:4,12:16:33.11:475,33,0	1/1:3,13:17:42.10:552,42,0	1/1:7,13:21:38.56:478,39,0	1/1:5,0:16:26.76:128,27,0	1/1:4,13:17:29.54:387,30,0	1/1:3,10:15:26.03:307,26,0	1/1:1,12:14:30.09:431,30,0	1/1:4,12:17:26.06:331,26,0	1/1:4,21:26:47.64:664,48,0	1/1:5,14:20:30.09:431,30,0	1/1:6,18:27:65.14:820,65,0	1/1:4,14:19:44.29:521,44,0	1/1:2,9:11:30.09:428,30,0	1/1:1,13:14:33.07:467,33,0	0/1:6,0:14:29.01:29,0,49	1/1:1,1:23:47.93:203,48,0	1/1:4,4:10:23:237,23,0	1/1:2,14:18:41.60:549,42,0	1/1:3,19:24:53.52:639,54,0	1/1:0,2:3:8.52:98,9,0
chr10	33708779	.	CTG	C	2273.47	PASS	AB=1.000;AC=29;AF=0.537;AN=54;BaseQRankSum=0.683;DP=455;FS=31.679;HRun=0;HaplotypeScore=94.9978;InbreedingCoeff=0.8797;MQ=71.56;MQ0=22;MQRankSum=-2.574;QD=13.14;ReadPosRankSum=-4.007;VQSLOD=0.9325;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:14:27.03:0,27,371	1/1:5,0:5:8.99:89,9,0	0/0:32,0:20:44.02:0,44,680	0/0:49,0:29:25.03:0,25,642	0/0:17,0:16:9.03:0,9,167	0/0:28,0:27:45.61:0,46,819	0/0:16,0:15:18.05:0,18,313	1/1:17,0:15:29.96:262,30,0	0/0:23,0:21:51.58:0,52,924	1/1:10,0:10:23.99:218,24,0	1/1:12,0:12:8.98:73,9,0	0/0:17,0:17:48.13:0,48,791	1/1:13,0:12:26.61:190,27,0	1/1:10,0:9:23.88:190,24,0	0/0:17,0:16:42.12:0,42,681	0/1:7,0:7:31.80:92,0,32	0/0:12,0:11:21.90:0,22,357	1/1:16,0:13:15.32:112,15,0	1/1:5,0:4:9.47:82,9,0	1/1:19,0:19:39.40:320,39,0	1/1:11,0:10:10.23:76,10,0	./.	0/0:29,0:27:36.09:0,36,615	0/0:16,0:15:39.12:0,39,672	1/1:16,0:15:29.53:248,30,0	1/1:1,8:9:20.95:177,21,0	1/1:9,1:7:17.19:127,17,0	1/1:13,0:12:32.61:234,33,0
chr10	33708789	.	G	GTC	1902.30	PASS	AB=0.920;AC=33;AF=0.635;AN=52;BaseQRankSum=-3.311;DP=402;FS=2.502;HRun=0;HaplotypeScore=86.5240;InbreedingCoeff=0.5600;MQ=59.88;MQ0=28;MQRankSum=-2.197;QD=8.09;ReadPosRankSum=1.800;VQSLOD=3.4693;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:13:14.88:0,15,104	./.	0/0:22,0:12:14.61:0,15,119	0/0:39,0:19:9.30:0,9,175	1/1:20,0:19:3.01:50,3,0	1/1:4,27:30:35.94:623,36,0	0/1:7,14:19:10.22:238,0,10	0/1:8,0:6:0:0,0,0	1/1:11,11:20:35.58:524,36,0	1/1:10,0:9:3:27,3,0	1/1:7,0:7:3:25,3,0	0/0:20,0:18:24.91:0,25,431	1/1:11,0:9:8.87:60,9,0	1/1:7,0:6:5.99:49,6,0	0/0:14,0:13:27.06:0,27,319	1/1:5,0:5:0.47:1,0,0	1/1:5,9:12:21.07:361,21,0	0/1:16,0:13:0:0,0,0	0/1:3,0:2:0:0,0,0	1/1:12,0:12:2.55:23,3,0	1/1:11,0:10:3:25,3,0	./.	0/0:27,0:25:15.03:0,15,181	0/0:16,0:15:36.06:0,36,425	0/1:13,0:12:0:0,0,0	1/1:7,0:7:4.98:24,5,0	1/1:8,0:5:2.88:8,3,0	1/1:9,0:8:4.51:23,5,0
chr10	33708791	.	CTCTCTG	C	1293.39	PASS	AB=1.000;AC=33;AF=0.635;AN=52;BaseQRankSum=0.551;DP=379;FS=5.933;HRun=0;HaplotypeScore=97.3203;InbreedingCoeff=0.5029;MQ=59.66;MQ0=28;MQRankSum=-2.317;QD=5.85;ReadPosRankSum=2.708;VQSLOD=1.1738;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:12:2.20:0,2,37	./.	0/0:17,0:9:13.29:0,13,111	0/0:36,0:16:9.30:0,9,177	1/1:6,16:21:0.74:46,1,0	1/1:30,0:30:24.12:298,24,0	0/1:22,0:20:41.86:120,0,42	0/1:6,0:4:0:0,0,0	1/1:20,0:18:31.73:309,32,0	1/1:5,0:4:5.97:47,6,0	1/1:6,0:6:3:25,3,0	0/0:21,0:19:19.10:0,19,197	1/1:9,0:7:11.86:86,12,0	1/1:7,0:6:8.95:68,9,0	0/0:13,0:12:26.24:0,26,207	1/1:5,0:5:8.88:61,9,0	0/1:14,0:12:8.02:181,0,8	1/1:16,0:13:2.98:22,3,0	0/1:3,0:2:0:0,0,0	1/1:9,0:9:2.55:23,3,0	1/1:11,0:10:5.99:49,6,0	./.	0/0:25,0:23:15.03:0,15,181	0/0:18,0:17:32.21:0,32,270	0/1:13,0:12:0:0,0,0	1/1:7,0:7:8.96:71,9,0	1/1:8,0:5:4.97:27,5,0	1/1:7,0:6:4.51:23,5,0
chr10	33708803	.	CTG	C	1442.47	PASS	AB=0.986;AC=34;AF=0.810;AN=42;BaseQRankSum=0.298;DP=284;FS=0.000;HRun=0;HaplotypeScore=64.2409;InbreedingCoeff=0.3020;MQ=48.37;MQ0=30;MQRankSum=0.350;QD=6.68;ReadPosRankSum=-4.255;VQSLOD=1.8633;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:15:20.79:169,21,0	./.	0/1:2,0:2:0.02:2,0,0	0/0:18,0:4:3:0,3,27	1/1:23,0:22:8.80:58,9,0	0/1:32,0:31:4.98:5,0,622	0/0:20,0:17:20.62:0,21,283	./.	0/1:21,0:19:71.19:71,0,418	1/1:5,0:4:5.97:48,6,0	./.	1/1:19,0:17:24.67:266,25,0	1/1:8,0:6:11.86:86,12,0	1/1:5,0:4:8.91:66,9,0	1/1:17,0:16:32.58:244,33,0	1/1:3,0:3:8.88:61,9,0	0/1:16,1:15:10.47:10,0,307	1/1:9,0:6:2.58:19,3,0	./.	1/1:1,0:1:0.47:1,0,0	1/1:7,0:4:2.99:24,3,0	./.	./.	1/1:17,0:16:35.71:276,36,0	./.	1/1:3,0:3:8.96:72,9,0	1/1:5,0:3:7.81:56,8,0	1/1:3,0:2:5.80:33,6,0
chr10	33711083	.	G	GA	24959.01	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-7.847;DP=692;FS=1.705;HRun=1;HaplotypeScore=73.3515;InbreedingCoeff=0.9937;MQ=89.03;MQ0=0;MQRankSum=-12.454;QD=39.74;ReadPosRankSum=6.728;VQSLOD=4.8146;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,29:30:84.28:1258,84,0	1/1:0,15:15:39.13:584,39,0	0/0:33,0:33:93.26:0,93,1162	0/0:31,0:31:77.33:0,77,876	1/1:0,25:25:60.10:885,60,0	1/1:0,30:30:81.16:1154,81,0	1/1:1,19:20:51.17:764,51,0	1/1:4,27:31:81.24:1188,81,0	1/1:1,27:28:81.14:1159,81,0	1/1:1,21:22:63.21:944,63,0	1/1:1,20:21:57.15:827,57,0	1/1:1,20:21:60.20:898,60,0	1/1:0,35:35:96.32:1431,96,0	1/1:1,21:22:63.21:943,63,0	1/1:0,33:33:96.33:1437,96,0	1/1:1,21:22:54.13:782,54,0	1/1:1,20:21:57.19:848,57,0	1/1:1,8:9:21.03:290,21,0	1/1:1,25:26:78.23:1110,78,0	1/1:0,29:29:84.23:1231,84,0	1/1:1,30:31:81.27:1214,81,0	1/1:0,25:25:66.13:936,66,0	1/1:3,12:15:39.13:567,39,0	1/1:0,15:15:39.13:583,39,0	1/1:0,24:24:63.21:938,63,0	1/1:1,36:37:99:1553,105,0	1/1:0,33:33:78.04:1167,78,0	1/1:0,8:8:18.06:269,18,0
chr10	33711382	.	T	TC	2076.76	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-7.777;DP=561;FS=0.989;HRun=8;HaplotypeScore=59.1737;InbreedingCoeff=0.9947;MQ=76.04;MQ0=0;MQRankSum=-0.907;QD=21.86;ReadPosRankSum=3.304;VQSLOD=4.1254;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,30:36:75.22:864,75,0	0/0:11,0:11:26.02:0,26,268	0/0:17,0:17:41.99:0,42,374	0/0:28,0:26:54.85:0,55,525	0/0:21,0:21:54.02:0,54,493	0/0:23,0:23:32.13:0,32,390	0/0:28,0:28:65.68:0,66,575	0/0:34,0:34:77.99:0,78,703	0/0:21,0:21:48:0,48,433	0/0:16,0:16:34.85:0,35,311	0/0:14,0:14:33.01:0,33,301	1/1:3,14:17:39.12:450,39,0	0/0:16,0:16:45.02:0,45,410	0/0:22,0:22:62.94:0,63,560	0/0:20,0:20:50.96:0,51,453	0/0:18,0:18:51.01:0,51,463	0/0:21,0:21:59.93:0,60,533	0/0:7,0:7:21.01:0,21,192	0/0:9,0:8:24.01:0,24,220	0/0:21,0:21:62.96:0,63,556	0/0:35,0:35:74.14:0,74,726	0/0:15,0:15:39.01:0,39,354	1/1:5,17:22:23.60:507,24,0	1/1:3,17:20:36.11:415,36,0	0/0:19,0:19:40.10:0,40,402	0/0:17,0:17:41.99:0,42,374	0/0:25,0:25:61.28:0,61,525	0/0:8,0:8:18:0,18,165
chr10	33711597	.	GCA	G	919.13	PASS	AB=0.922;AC=16;AF=0.308;AN=52;BaseQRankSum=8.020;DP=651;FS=2.011;HRun=0;HaplotypeScore=103.0025;InbreedingCoeff=0.4490;MQ=65.19;MQ0=11;MQRankSum=-0.774;QD=3.66;ReadPosRankSum=2.494;VQSLOD=2.1598;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:32:19.75:96,20,0	0/0:7,0:7:6:0,6,66	./.	./.	0/0:13,0:21:21.01:0,21,206	0/0:22,0:24:34.12:0,34,368	0/0:15,0:16:12.03:0,12,158	0/0:32,0:31:20.91:0,21,225	0/0:15,1:23:14.99:0,15,127	0/0:23,0:22:30.03:0,30,341	0/1:12,1:13:20.99:21,0,71	1/1:9,11:20:27.07:296,27,0	0/0:22,0:24:33.09:0,33,455	0/0:28,0:28:27.07:0,27,382	1/1:15,0:30:24.28:116,24,0	0/0:20,0:20:21.07:0,21,311	0/0:21,0:33:38.98:0,39,385	0/0:19,0:20:35.29:0,35,349	0/1:13,0:13:2.13:2,0,85	0/0:12,0:12:12.04:0,12,176	0/1:34,5:37:86.24:86,0,390	0/0:15,0:16:18.04:0,18,246	1/1:13,9:23:27.07:295,27,0	1/1:15,2:18:14.87:145,15,0	0/1:24,1:26:2.78:3,0,329	0/1:26,2:28:12.38:12,0,404	0/0:31,0:32:0.73:0,1,549	0/1:7,1:8:20.78:21,0,123
chr10	33713792	.	C	CT	84	PASS	AB=0.808;AC=2;AF=0.036;AN=56;BaseQRankSum=-1.701;DP=713;FS=6.545;HRun=0;HaplotypeScore=68.1877;InbreedingCoeff=-0.0359;MQ=90.70;MQ0=0;MQRankSum=-2.269;QD=4.00;ReadPosRankSum=-0.299;VQSLOD=2.2709;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,117,1617	0/0:10,0:10:27.08:0,27,361	0/0:27,0:27:58.03:0,58,984	0/0:30,0:30:84.22:0,84,1084	0/0:25,0:25:72.23:0,72,990	0/0:29,0:29:87.28:0,87,1200	0/0:19,0:19:57.18:0,57,780	0/0:28,0:28:84.26:0,84,1144	0/0:20,0:20:60.20:0,60,832	0/0:29,0:29:84.27:0,84,1159	0/0:21,0:21:63.20:0,63,865	0/0:19,0:19:57.16:0,57,760	0/0:28,0:28:84.28:0,84,1171	0/0:21,0:21:63.21:0,63,881	0/0:32,0:32:96.30:0,96,1310	0/0:22,0:22:66.22:0,66,922	0/0:20,0:20:57.19:0,57,793	0/1:5,4:9:99:157,0,183	0/0:24,0:24:69.23:0,69,964	0/0:24,0:23:69.23:0,69,965	0/0:31,0:31:93.31:0,93,1299	0/0:37,0:37:99:0,108,1492	0/0:35,0:35:96.32:0,96,1342	0/0:34,0:34:99:0,102,1409	0/0:28,0:28:81.27:0,81,1129	0/0:29,0:29:87.29:0,87,1217	0/0:31,0:31:90.28:0,90,1241	0/1:11,1:12:11.76:12,0,424
chr10	33714292	.	T	TGATA	6532.99	PASS	AB=0.929;AC=28;AF=0.538;AN=52;BaseQRankSum=-8.719;DP=702;FS=10.854;HRun=0;HaplotypeScore=125.7599;InbreedingCoeff=0.7780;MQ=58.27;MQ0=5;MQRankSum=1.338;QD=14.92;ReadPosRankSum=-2.595;VQSLOD=3.6177;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:23:5.73:42,6,0	0/0:9,0:9:18.06:0,18,277	./.	./.	0/0:41,0:40:57.16:0,57,826	1/1:17,0:33:3.97:63,4,0	0/1:27,0:27:10.92:18,0,11	1/1:54,0:53:20.94:224,21,0	1/1:11,11:24:30.10:698,30,0	0/0:26,0:26:33.10:0,33,470	0/0:25,0:25:39.08:0,39,572	1/1:10,9:21:24.08:560,24,0	0/0:34,0:34:57.33:0,57,912	0/0:22,0:22:33.11:0,33,507	1/1:15,11:27:18.06:421,18,0	0/0:14,0:14:15.94:0,16,232	1/1:19,0:29:3.01:31,3,0	0/0:15,0:15:24.08:0,24,369	1/1:17,5:22:18.06:419,18,0	1/1:19,16:35:39.13:869,39,0	1/1:9,21:30:27.09:617,27,0	0/0:22,0:22:33.11:0,33,507	1/1:16,14:30:24.02:561,24,0	0/1:15,3:18:31.07:248,0,31	0/0:26,0:27:48.13:0,48,674	1/1:17,16:33:45.14:1006,45,0	1/1:12,16:29:19.24:755,19,0	0/0:10,0:20:15.02:0,15,140
chr10	33714718	.	T	TTAGA	4112.93	PASS	AB=0.913;AC=28;AF=0.538;AN=52;BaseQRankSum=-1.219;DP=603;FS=0.558;HRun=0;HaplotypeScore=105.7082;InbreedingCoeff=0.5808;MQ=68.94;MQ0=7;MQRankSum=-1.620;QD=12.89;ReadPosRankSum=-4.330;VQSLOD=2.2520;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:23:9.03:0,9,134	1/1:7,2:9:6.02:139,6,0	./.	./.	0/0:29,0:30:39.13:0,39,570	1/1:5,5:10:6.02:139,6,0	1/1:9,0:9:8.99:74,9,0	1/1:29,0:29:6.66:26,7,0	1/1:12,5:17:9.03:209,9,0	0/0:24,0:23:32.59:0,33,445	0/0:28,0:28:35.97:0,36,366	0/1:18,0:17:6.90:236,0,7	1/1:12,0:21:12.04:191,12,0	1/1:10,0:19:18.05:258,18,0	0/0:26,0:26:29.99:0,30,343	0/0:29,0:30:39:0,39,439	1/1:17,0:23:8.05:84,8,0	0/0:12,0:14:6.77:0,7,215	1/1:9,7:16:21.06:425,21,0	0/1:13,15:28:15.67:531,0,16	0/0:22,0:22:33.10:0,33,478	1/1:8,0:15:9.03:156,9,0	0/1:24,0:24:56.80:320,0,57	0/1:18,0:18:54.85:134,0,55	0/0:34,0:34:39.09:0,39,533	1/1:15,10:27:36.09:715,36,0	1/1:25,11:36:21.07:474,21,0	0/0:3,0:3:5.99:0,6,50
chr10	33714767	.	T	TAGAC	2444.44	PASS	AB=1.000;AC=16;AF=0.286;AN=56;BaseQRankSum=5.721;DP=582;FS=2.966;HRun=0;HaplotypeScore=108.6075;InbreedingCoeff=0.1178;MQ=65.02;MQ0=4;MQRankSum=-1.069;QD=9.66;ReadPosRankSum=2.754;VQSLOD=2.9874;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:44.90:0,45,436	0/1:7,0:7:68.50:69,0,104	0/0:15,0:13:29.16:0,29,310	0/0:13,0:11:29.94:0,30,283	0/0:28,0:28:84.01:0,84,958	0/1:16,0:16:54.49:54,0,214	0/0:13,0:13:21.38:0,21,168	0/0:47,0:45:95:0,95,821	0/1:11,0:11:99:108,0,123	0/0:23,0:23:54.05:0,54,680	0/0:30,0:30:71.99:0,72,744	1/1:2,18:20:15.05:377,15,0	0/1:17,0:17:2.24:2,0,209	0/1:19,0:19:87.93:88,0,182	0/0:20,0:20:42.03:0,42,468	0/0:25,0:25:57.02:0,57,620	0/0:18,0:19:7.59:0,8,215	0/0:15,0:17:18.73:0,19,361	0/1:21,0:19:99:199,0,155	0/1:28,0:28:99:297,0,260	0/0:20,0:20:57:0,57,724	0/1:17,0:17:71.43:71,0,161	1/1:6,26:31:20.68:525,21,0	1/1:3,12:15:9.03:227,9,0	0/0:23,0:23:51.08:0,51,688	0/1:29,0:29:99:328,0,368	0/1:20,0:20:99:269,0,107	0/0:15,0:15:38.91:0,39,313
chr10	33715883	.	A	ATT	9864.74	PASS	AB=0.667;AC=51;AF=0.911;AN=56;BaseQRankSum=-3.864;DP=511;FS=20.763;HRun=8;HaplotypeScore=93.6354;InbreedingCoeff=0.6421;MQ=69.35;MQ0=4;MQRankSum=-1.554;QD=20.81;ReadPosRankSum=3.504;VQSLOD=2.2059;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:45:86.85:321,87,0	1/1:3,5:8:15.02:198,15,0	0/0:19,0:9:6.56:0,7,134	0/0:18,0:16:20.73:0,21,246	1/1:3,0:24:28.78:157,29,0	1/1:3,0:20:37.43:129,37,0	1/1:3,0:20:36.95:149,37,0	1/1:10,14:24:48.06:682,48,0	1/1:7,0:19:32.80:124,33,0	1/1:5,13:18:39.09:583,39,0	1/1:4,10:14:29.95:373,30,0	1/1:4,1:17:29.81:156,30,0	1/1:4,14:19:48.12:732,48,0	1/1:4,11:15:27.05:399,27,0	1/1:13,0:19:23.59:93,24,0	1/1:4,12:16:33.11:524,33,0	1/1:7,0:21:0.38:88,0,0	1/1:8,14:21:45.15:700,45,0	1/1:11,9:19:39.13:607,39,0	1/1:2,14:16:39.13:606,39,0	1/1:3,6:10:21.07:319,21,0	1/1:6,14:21:45.07:658,45,0	1/1:6,0:13:17.64:95,18,0	0/1:5,0:10:24.95:25,0,48	1/1:3,17:19:48.16:757,48,0	1/1:3,11:14:35.61:532,36,0	1/1:6,11:17:33.11:515,33,0	1/1:1,7:9:23.57:342,24,0
chr10	33715896	.	CT	C	711	PASS	AB=0.907;AC=9;AF=0.161;AN=56;BaseQRankSum=0.149;DP=516;FS=9.111;HRun=12;HaplotypeScore=98.5200;InbreedingCoeff=0.3546;MQ=61.59;MQ0=6;MQRankSum=-0.029;QD=4.90;ReadPosRankSum=0.990;VQSLOD=1.5852;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:34,9:42:38.08:478,38,0	0/1:8,1:9:27.90:28,0,99	0/0:14,0:5:5.80:0,6,41	0/0:14,0:12:9:0,9,80	0/0:26,0:28:60.04:0,60,571	0/0:17,0:17:44.29:0,44,427	0/0:22,0:24:42.60:0,43,433	0/0:23,0:24:51.02:0,51,496	0/0:16,0:17:12.62:0,13,284	0/1:17,2:19:13.13:13,0,233	0/0:15,0:16:32.82:0,33,293	0/0:11,0:20:43.65:0,44,264	0/0:17,1:19:6.63:0,7,219	0/0:12,0:12:23.92:0,24,210	1/1:12,9:19:41.77:322,42,0	0/0:17,0:17:33:0,33,317	0/0:20,0:20:35.05:0,35,375	0/1:24,1:23:3.11:3,0,278	0/0:21,0:20:29.02:0,29,260	0/1:14,2:17:0.21:0,0,194	0/1:9,1:10:2:2,0,156	0/0:20,0:21:29.83:0,30,268	0/0:5,0:14:11.49:0,11,62	0/0:3,0:9:17.23:0,17,93	0/0:19,0:20:32.72:0,33,293	0/0:13,0:14:23.87:0,24,222	0/0:17,0:16:30.02:0,30,293	0/0:9,0:9:2.16:0,2,55
chr10	33716033	.	TCAGGGTTCCTTTCCTAC	T	27337.63	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=16.526;DP=576;FS=0.000;HRun=0;HaplotypeScore=283.8052;InbreedingCoeff=0.9677;MQ=86.63;MQ0=1;MQRankSum=-16.333;QD=99.41;ReadPosRankSum=5.957;VQSLOD=3.8740;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,105,8080	1/1:6,9:15:18.06:893,18,0	0/0:30,0:30:90.30:0,90,5774	0/0:22,0:22:59.96:0,60,3679	0/0:30,0:30:90.31:0,90,7249	0/0:24,0:24:66.21:0,66,4717	0/0:18,0:18:48.16:0,48,3620	1/1:5,8:13:24.06:640,24,0	0/0:25,0:25:72.25:0,72,5950	1/1:1,16:17:48.16:2187,48,0	1/1:5,24:29:57.20:2713,57,0	0/0:21,0:21:60.21:0,60,4641	1/1:6,12:18:33.11:1638,33,0	1/1:2,18:19:45.15:2234,45,0	0/0:19,0:19:57.18:0,57,4191	1/1:3,18:21:42.14:2026,42,0	0/0:28,0:28:75.23:0,75,5525	1/1:4,5:8:9.03:447,9,0	1/1:3,9:12:27.05:899,27,0	1/1:5,31:36:90.31:4180,90,0	1/1:2,1:3:6.02:247,6,0	1/1:2,20:22:57.20:2829,57,0	0/0:21,0:21:60.21:0,60,4971	0/0:26,0:26:78.22:0,78,5560	1/1:3,16:19:39.13:1936,39,0	1/1:3,14:17:42.14:2086,42,0	1/1:1,16:17:39.13:1936,39,0	1/1:2,5:7:9.03:447,9,0
chr10	33716090	.	A	AAAAAC	1856.13	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-6.790;DP=650;FS=0.807;HRun=0;HaplotypeScore=219.9183;InbreedingCoeff=0.8789;MQ=69.75;MQ0=1;MQRankSum=-0.962;QD=68.75;ReadPosRankSum=0.764;VQSLOD=4.0514;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,99,1765	0/0:5,0:5:12.04:0,12,231	0/0:19,0:19:31.63:0,32,583	0/0:17,0:16:27.05:0,27,434	0/0:36,0:36:78.25:0,78,1453	0/0:22,0:22:51.17:0,51,984	0/0:20,0:20:45.15:0,45,828	0/0:31,0:31:66.20:0,66,1153	0/0:24,0:24:66.20:0,66,1198	0/0:21,0:21:48.16:0,48,908	0/0:34,0:34:81.23:0,81,1523	0/0:27,0:27:69.22:0,69,1272	0/0:18,0:18:45:0,45,718	0/0:20,0:20:42.14:0,42,810	1/1:5,22:27:69.24:1951,69,0	0/0:23,0:23:44.92:0,45,830	0/0:35,0:35:78.21:0,78,1424	0/0:13,0:13:30.10:0,30,570	0/0:24,0:24:51.11:0,51,872	0/0:36,0:36:78.22:0,78,1458	0/0:14,0:14:36.04:0,36,613	0/0:29,0:29:54.18:0,54,1010	0/0:28,0:28:57.18:0,57,1048	0/0:21,0:20:48.10:0,48,854	0/0:18,0:18:39.13:0,39,752	0/0:22,0:22:51.13:0,51,923	0/0:24,0:24:45.15:0,45,868	0/0:4,0:4:6.02:0,6,94
chr10	33716108	.	TCAA	T	4097.36	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=8.375;DP=633;FS=0.000;HRun=0;HaplotypeScore=143.1845;InbreedingCoeff=0.9586;MQ=62.57;MQ0=1;MQRankSum=1.430;QD=29.69;ReadPosRankSum=1.571;VQSLOD=3.9818;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:81.24:0,81,1588	0/0:7,0:7:15.05:0,15,285	0/0:17,0:16:19.89:0,20,370	0/0:17,0:15:32.69:0,33,529	1/1:7,28:35:84.20:1180,84,0	1/1:5,19:24:42.14:614,42,0	1/1:2,17:19:42.14:615,42,0	0/0:28,0:28:60.20:0,60,1153	1/1:8,16:24:45.12:635,45,0	0/0:21,0:21:48.16:0,48,991	0/0:33,0:33:78.26:0,78,1425	0/0:26,0:26:60.21:0,60,1238	0/0:16,0:16:36.12:0,36,738	0/0:22,0:22:45.09:0,45,859	0/0:28,0:28:75.24:0,75,1455	0/0:21,1:22:4.17:0,4,884	1/1:5,31:36:72.24:1053,72,0	0/0:17,0:17:39.13:0,39,805	0/0:22,0:21:45.14:0,45,883	0/0:30,0:30:69.24:0,69,1382	0/0:15,0:15:39.08:0,39,761	0/0:20,0:20:48.16:0,48,979	0/0:24,0:24:57.20:0,57,1177	0/0:20,0:19:51.16:0,51,999	0/0:21,0:21:48.16:0,48,960	0/0:26,0:26:69.24:0,69,1416	0/0:22,0:22:54.18:0,54,1075	0/0:5,0:5:14.98:0,15,265
chr10	33722617	.	CA	C	1266.10	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=8.169;DP=767;FS=4.233;HRun=1;HaplotypeScore=75.6447;InbreedingCoeff=0.9980;MQ=83.83;MQ0=1;MQRankSum=-2.737;QD=37.24;ReadPosRankSum=1.777;VQSLOD=4.3383;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,114,1822	0/0:9,0:9:27.09:0,27,432	0/0:27,0:27:81.26:0,81,1244	0/0:20,0:20:60.11:0,60,857	0/0:35,0:35:99:0,105,1678	0/0:34,0:33:99:0,99,1555	0/0:18,0:18:54.15:0,54,810	0/0:34,0:34:99:0,102,1610	0/0:25,0:25:75.26:0,75,1199	0/0:31,0:31:90.26:0,90,1375	0/0:40,0:40:99:0,120,1893	0/0:22,0:22:66.23:0,66,1053	0/0:25,0:25:75.21:0,75,1147	0/0:21,0:21:63.20:0,63,984	1/1:0,34:34:99:1361,99,0	0/0:33,0:33:99:0,99,1549	0/0:23,0:23:69.24:0,69,1103	0/0:20,0:20:60.20:0,60,958	0/0:28,0:27:78.27:0,78,1248	0/0:37,0:37:99:0,111,1774	0/0:17,0:17:51.17:0,51,815	0/0:27,0:27:81.25:0,81,1249	0/0:37,0:37:99:0,111,1774	0/0:20,0:20:60.19:0,60,936	0/0:29,0:29:87.30:0,87,1391	0/0:30,0:30:90.30:0,90,1420	0/0:43,0:43:99:0,129,2014	0/0:10,0:10:27.07:0,27,407
chr10	33724239	.	AGATAGAT	A	5108.69	PASS	AB=0.854;AC=17;AF=0.327;AN=52;BaseQRankSum=-13.803;DP=762;FS=5.614;HRun=0;HaplotypeScore=303.3866;InbreedingCoeff=-0.3183;MQ=46.30;MQ0=8;MQRankSum=-1.899;QD=11.25;ReadPosRankSum=-1.823;VQSLOD=2.6764;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:35,0:34:17.35:17,0,411	0/0:14,0:12:12.75:0,13,155	./.	./.	0/0:39,0:36:46.77:0,47,721	0/0:25,0:24:38.52:0,39,580	0/0:20,0:19:17.63:0,18,230	1/1:29,0:28:30.52:628,31,0	0/0:37,0:36:42.69:0,43,703	0/1:35,6:37:99:802,0,364	0/1:18,4:20:99:244,0,113	0/1:31,0:31:66.88:67,0,502	0/1:27,10:34:99:251,0,257	0/0:38,0:33:50.89:0,51,382	0/1:42,0:40:50.89:51,0,140	0/1:19,8:25:99:351,0,183	0/0:24,0:24:24.30:0,24,341	0/1:9,1:9:76.30:168,0,76	0/1:12,4:15:99:405,0,104	0/1:20,13:32:99:339,0,133	0/1:16,3:18:58.69:210,0,59	0/1:25,4:27:91.48:91,0,191	0/0:36,0:34:53.14:0,53,1021	0/0:19,0:19:9.57:0,10,163	0/0:42,0:37:65.72:0,66,853	0/1:22,11:31:99:755,0,259	0/1:20,10:25:91.79:469,0,92	0/1:17,3:20:99:261,0,192
chr10	33724243	.	AGAT	A	4200.94	PASS	AB=0.948;AC=25;AF=0.463;AN=54;BaseQRankSum=-11.946;DP=778;FS=29.999;HRun=0;HaplotypeScore=266.7526;InbreedingCoeff=-0.7355;MQ=46.30;MQ0=9;MQRankSum=0.891;QD=6.02;ReadPosRankSum=-1.386;VQSLOD=1.5084;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:24,12:35:99:150,0,294	0/1:9,5:12:45.05:237,0,45	0/0:9,0:1:0:0,0,0	./.	0/1:40,0:37:33.18:33,0,655	0/1:24,0:23:89.85:90,0,456	0/1:20,0:19:41.64:42,0,245	0/1:29,0:28:97.80:657,0,98	0/0:37,0:36:1.31:0,1,588	0/1:38,2:37:99:433,0,403	0/1:22,1:21:61.08:61,0,135	0/1:32,1:33:83.28:83,0,513	0/1:40,1:38:91.84:92,0,302	0/1:24,16:35:99:336,0,225	1/1:31,12:41:39.13:632,39,0	0/1:27,1:26:99:123,0,202	0/0:25,0:25:26.91:0,27,357	0/1:10,0:9:76.33:78,0,76	0/1:15,0:14:99:113,0,101	0/1:33,1:33:99:163,0,154	0/1:18,0:17:58.95:75,0,59	0/1:28,1:27:4.78:5,0,212	0/1:36,0:34:71.44:71,0,695	0/1:20,0:20:8.70:9,0,190	0/1:36,6:37:99:124,0,381	0/1:33,1:32:99:257,0,304	0/1:29,0:24:91.83:205,0,92	0/1:20,0:20:99:132,0,191
chr10	33724250	.	AGATAGAT	A	982.20	PASS	AB=0.998;AC=28;AF=0.500;AN=56;BaseQRankSum=7.700;DP=793;FS=65.436;HRun=0;HaplotypeScore=313.8984;InbreedingCoeff=0.1590;MQ=46.22;MQ0=8;MQRankSum=0.919;QD=1.65;ReadPosRankSum=-0.712;VQSLOD=0.1338;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:35:22.67:0,23,527	0/1:16,0:14:20.27:20,0,268	0/0:11,0:1:0.89:0,1,2	0/0:11,0:1:3.01:0,3,58	0/1:42,0:39:51.15:51,0,352	0/1:25,0:24:62.53:63,0,248	0/1:22,0:21:4.24:4,0,279	0/1:31,0:31:4.02:196,0,4	0/1:40,0:39:99:139,0,290	0/1:40,1:39:96.61:127,0,97	1/1:22,0:20:5.86:19,6,0	0/0:29,0:29:51.58:0,52,759	1/1:41,0:38:15.26:80,15,0	0/1:43,0:38:6.59:7,0,347	0/0:15,24:37:26.98:0,27,454	1/1:28,0:26:6.69:24,7,0	0/1:21,0:21:26.49:26,0,75	1/1:9,0:9:5.65:50,6,0	0/0:18,1:18:9.18:0,9,106	1/1:35,0:34:10.31:43,10,0	0/1:20,0:19:0.27:4,0,0	1/1:32,1:31:13.24:70,13,0	0/0:34,0:32:57.15:0,57,953	0/0:20,0:20:15.59:0,16,286	0/1:44,0:39:0.98:1,0,764	0/1:37,0:35:0.97:131,0,1	1/1:28,0:23:2.97:30,3,0	1/1:16,0:15:9.54:65,10,0
chr10	33724254	.	AGAT	A	7225.16	PASS	AB=0.697;AC=25;AF=0.446;AN=56;BaseQRankSum=-3.362;DP=788;FS=31.610;HRun=0;HaplotypeScore=253.0609;InbreedingCoeff=0.3591;MQ=45.89;MQ0=9;MQRankSum=2.050;QD=15.54;ReadPosRankSum=2.818;VQSLOD=3.3016;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:34:21.06:0,21,387	0/1:6,11:15:99:173,0,171	0/0:12,0:1:0:0,0,0	0/0:13,0:2:3.48:0,3,69	0/0:42,0:39:49.73:0,50,1133	0/0:23,0:22:47.75:0,48,892	0/0:21,0:20:24.35:0,24,488	0/1:35,0:35:99:100,0,731	0/0:39,0:38:59.25:0,59,1006	0/1:15,25:38:99:1090,0,133	1/1:7,16:21:18.85:346,19,0	0/0:30,0:30:50.20:0,50,379	1/1:14,26:37:32.72:729,33,0	0/1:19,24:38:99:582,0,211	0/0:38,0:36:27:0,27,342	1/1:12,15:25:19.18:486,19,0	0/0:18,0:18:29.73:0,30,529	1/1:2,7:9:2.62:225,3,0	0/1:14,6:19:99:222,0,290	1/1:15,17:31:25.20:447,25,0	1/1:8,12:19:7.58:148,8,0	1/1:11,23:32:1.80:508,2,0	0/0:32,0:30:57.87:0,58,520	0/0:20,0:20:16.48:0,16,150	0/1:17,27:39:99:621,0,500	0/1:15,22:35:10.35:801,0,10	1/1:16,11:22:4.98:279,5,0	1/1:5,12:16:9.30:468,9,0
chr10	33724266	.	G	GATAC	7670.32	PASS	AB=0.784;AC=42;AF=0.750;AN=56;BaseQRankSum=-5.403;DP=829;FS=4.409;HRun=0;HaplotypeScore=262.2117;InbreedingCoeff=0.6339;MQ=46.53;MQ0=11;MQRankSum=3.804;QD=11.28;ReadPosRankSum=-5.119;VQSLOD=2.7606;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:50,0:49:31.32:314,31,0	1/1:21,0:19:13.84:100,14,0	0/0:19,0:3:2.48:0,2,14	0/0:14,0:2:2.29:0,2,46	1/1:20,25:46:6.01:1173,6,0	0/1:5,16:20:5.89:895,0,6	1/1:11,8:19:12.04:272,12,0	1/1:41,0:41:53.62:469,54,0	1/1:16,23:37:48.16:1153,48,0	1/1:43,0:41:47.61:486,48,0	1/1:21,0:19:8.80:78,9,0	0/0:8,0:32:42.04:0,42,391	1/1:46,0:43:28.51:298,29,0	1/1:38,0:33:7.24:140,7,0	0/0:41,0:39:11.96:0,12,95	0/1:24,0:22:0.22:48,0,0	1/1:8,8:16:27.09:645,27,0	1/1:8,0:8:2.29:58,2,0	1/1:22,0:21:20.13:213,20,0	1/1:37,0:36:17.90:172,18,0	1/1:20,0:19:3.51:43,4,0	1/1:34,1:33:26.21:316,26,0	0/0:17,0:24:40.61:0,41,375	0/0:10,0:17:15.02:0,15,140	1/1:44,0:39:10.41:132,10,0	1/1:40,0:38:20.53:422,21,0	1/1:28,0:23:15.44:168,15,0	1/1:18,0:17:2.60:78,3,0
chr10	33726267	.	GAGGAGGGA	G	1653.24	PASS	AB=0.969;AC=18;AF=0.333;AN=54;BaseQRankSum=3.951;DP=546;FS=0.000;HRun=0;HaplotypeScore=131.8610;InbreedingCoeff=0.7800;MQ=64.12;MQ0=17;MQRankSum=-1.317;QD=7.51;ReadPosRankSum=-0.460;VQSLOD=1.7799;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:23:11.90:12,0,27	0/0:5,0:5:6.02:0,6,148	./.	0/1:45,0:18:0:0,0,0	1/1:5,7:12:17.80:204,18,0	1/1:13,0:13:6.02:111,6,0	1/1:30,0:30:18.05:305,18,0	0/0:21,0:19:0:0,0,0	1/1:10,10:20:18.06:411,18,0	0/0:19,0:18:18.06:0,18,511	0/0:13,0:13:24.08:0,24,766	1/1:17,0:16:12:175,12,0	0/0:18,0:17:30.10:0,30,850	0/0:22,0:22:51.16:0,51,1660	0/0:34,0:33:42.40:0,42,620	0/0:23,0:23:45.14:0,45,1290	1/1:16,0:15:9.03:165,9,0	0/0:7,0:7:12.04:0,12,306	0/0:8,0:8:15.05:0,15,525	0/0:14,0:14:12.04:0,12,433	0/0:28,0:27:33.09:0,33,952	0/0:15,0:15:21.07:0,21,708	1/1:8,8:16:7.18:201,7,0	1/1:12,15:27:12.04:255,12,0	0/0:15,0:15:21.07:0,21,734	0/0:19,0:19:30.09:0,30,816	0/0:16,0:16:15.05:0,15,478	0/0:8,0:8:15.05:0,15,481
chr10	33726332	.	T	TGGAA	1605.55	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=5.105;DP=587;FS=3.973;HRun=0;HaplotypeScore=114.3568;InbreedingCoeff=0.6070;MQ=64.13;MQ0=5;MQRankSum=0.642;QD=22.94;ReadPosRankSum=-0.487;VQSLOD=3.4288;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,24:34:69.08:1698,69,0	0/0:8,0:8:18.03:0,18,272	0/1:36,0:24:9.70:10,0,296	0/0:27,0:17:5.07:0,5,177	0/0:17,0:17:39.13:0,39,633	0/0:14,0:14:39.12:0,39,616	0/0:27,0:27:53.80:0,54,816	0/0:19,0:19:39.11:0,39,581	0/0:19,0:19:30.03:0,30,468	0/0:15,0:15:36.12:0,36,594	0/0:20,0:20:48.15:0,48,765	0/0:19,0:19:48.15:0,48,759	0/0:18,0:18:39.10:0,39,589	0/0:30,0:30:69.22:0,69,1118	0/0:24,0:24:54.18:0,54,899	0/0:24,0:24:54.14:0,54,846	0/0:20,0:19:48.13:0,48,748	0/0:13,0:13:33.11:0,33,549	0/0:9,0:9:24.06:0,24,374	0/0:19,0:19:45.14:0,45,724	0/0:37,0:37:99:0,99,1572	0/0:21,0:21:45.14:0,45,724	0/0:22,0:22:36.12:0,36,599	0/0:27,0:27:42.14:0,42,699	0/0:20,0:20:51.17:0,51,849	0/0:25,0:25:63.21:0,63,1037	0/0:16,0:16:45.07:0,45,690	0/0:7,0:7:18.06:0,18,300
chr10	33727877	.	T	TGAGA	1552.62	PASS	AB=0.785;AC=23;AF=0.442;AN=52;BaseQRankSum=0.372;DP=684;FS=2.924;HRun=0;HaplotypeScore=143.2644;InbreedingCoeff=0.4534;MQ=69.52;MQ0=21;MQRankSum=-1.185;QD=4.29;ReadPosRankSum=0.413;VQSLOD=2.7884;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:8,0:10:6.01:0,6,56	0/1:46,0:21:0:0,0,0	./.	0/1:22,0:27:0:0,0,0	1/1:23,0:28:3.01:52,3,0	1/1:21,0:29:5.94:123,6,0	0/0:27,0:27:4.53:0,5,56	1/1:12,1:22:13.77:233,14,0	0/0:19,0:20:1.76:0,2,26	0/0:17,0:17:9.03:0,9,129	1/1:26,0:29:5.75:55,6,0	0/0:31,0:33:39.56:0,40,542	0/1:13,0:25:15.62:141,0,16	1/1:35,0:35:1.79:134,2,0	0/1:14,10:27:9.93:277,0,10	0/1:12,4:20:6.53:228,0,7	1/1:8,5:14:9.03:212,9,0	0/0:21,0:21:10.75:0,11,163	0/0:15,0:17:14.81:0,15,174	0/0:23,0:26:15.50:0,15,196	1/1:14,0:14:2.98:21,3,0	1/1:19,0:17:3.01:64,3,0	1/1:26,0:26:8.38:174,8,0	0/0:18,0:18:12.04:0,12,186	0/0:16,0:16:3.87:0,4,50	0/0:21,0:20:20.84:0,21,302	0/0:10,0:9:12.04:0,12,186
chr10	33728668	.	ATC	A	16816.76	PASS	AB=0.550;AC=33;AF=0.589;AN=56;BaseQRankSum=20.095;DP=705;FS=1.567;HRun=0;HaplotypeScore=120.7498;InbreedingCoeff=0.9259;MQ=62.46;MQ0=2;MQRankSum=-3.213;QD=44.14;ReadPosRankSum=1.888;VQSLOD=5.7088;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:56:99:0,166,3322	1/1:0,9:9:24.08:391,24,0	0/0:28,0:25:57.51:0,58,1405	0/0:38,0:31:79.50:0,80,1609	0/0:28,0:28:84.29:0,84,1706	0/0:28,0:28:84.29:0,84,1707	0/0:17,0:17:51.17:0,51,1021	1/1:0,35:35:99:1644,105,0	0/0:28,0:28:84.29:0,84,1707	1/1:0,31:31:93.30:1489,93,0	1/1:0,16:16:45.15:732,45,0	0/0:20,0:20:60.21:0,60,1203	1/1:0,23:23:63.22:1026,63,0	1/1:0,24:24:69.24:1121,69,0	1/1:0,26:26:75.26:1212,75,0	1/1:0,21:21:54.18:880,54,0	0/0:26,0:26:78.27:0,78,1566	0/1:2,9:11:43.99:361,0,44	1/1:0,13:13:39.13:636,39,0	1/1:0,22:22:60.09:889,60,0	1/1:0,21:21:48.16:754,48,0	1/1:0,27:27:63.21:1018,63,0	0/0:23,0:23:69.24:0,69,1381	0/0:32,0:32:96.33:0,96,1932	1/1:0,23:23:66.22:1064,66,0	1/1:0,29:29:84.29:1369,84,0	1/1:0,32:32:87.30:1409,87,0	1/1:0,18:18:51.17:820,51,0
chr10	33729936	.	C	CCT	14556.82	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-15.535;DP=648;FS=1.104;HRun=0;HaplotypeScore=78.9009;InbreedingCoeff=0.9809;MQ=81.45;MQ0=1;MQRankSum=-3.371;QD=37.13;ReadPosRankSum=1.781;VQSLOD=6.4868;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,108,1335	1/1:1,10:10:24.08:398,24,0	0/0:43,0:41:73.22:0,73,895	0/0:37,0:35:44.97:0,45,708	0/0:19,0:19:54.17:0,54,681	0/0:19,0:19:45.14:0,45,561	0/0:20,0:20:51.15:0,51,631	1/1:9,24:34:79:1190,79,0	0/0:25,0:25:63.20:0,63,795	1/1:4,18:22:60.16:940,60,0	1/1:2,14:16:36.12:598,36,0	1/1:0,14:15:33.11:548,33,0	1/1:3,21:24:54.18:894,54,0	1/1:1,16:17:45.15:748,45,0	0/0:20,0:20:54.17:0,54,681	1/1:0,15:15:33.11:549,33,0	0/0:32,0:32:78.20:0,78,965	1/1:6,16:22:5.57:612,6,0	1/1:4,12:16:33.11:533,33,0	1/1:2,12:15:38.16:580,38,0	1/1:5,29:34:75.26:1247,75,0	1/1:1,13:14:36.12:598,36,0	1/1:0,13:13:36.12:597,36,0	1/1:5,18:24:19.34:848,19,0	1/1:4,19:24:54.18:898,54,0	1/1:2,23:25:69.18:1087,69,0	1/1:8,24:32:63.22:1045,63,0	1/1:4,15:19:39.13:648,39,0
chr10	33731287	.	C	CT	9895.99	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=11.402;DP=501;FS=5.641;HRun=8;HaplotypeScore=93.5343;InbreedingCoeff=0.9922;MQ=52.50;MQ0=3;MQRankSum=-4.905;QD=27.57;ReadPosRankSum=0.519;VQSLOD=4.9433;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,16:21:45.13:519,45,0	1/1:2,4:6:12.04:138,12,0	0/0:10,0:7:19.56:0,20,166	0/0:10,0:9:21.01:0,21,192	0/0:38,0:38:93.02:0,93,846	0/0:12,0:12:33.02:0,33,302	0/0:21,0:21:45.01:0,45,412	1/1:2,31:31:90.15:1010,90,0	0/0:15,0:15:39:0,39,352	1/1:5,20:23:57.17:655,57,0	1/1:3,20:22:54.12:608,54,0	1/1:1,17:18:42.12:484,42,0	1/1:0,16:16:45.13:519,45,0	1/1:2,13:15:39.07:435,39,0	0/0:17,0:17:45:0,45,406	1/1:4,15:19:48.08:526,48,0	0/0:19,0:19:54.02:0,54,494	1/1:2,16:18:51.15:588,51,0	1/1:4,13:14:39.08:436,39,0	1/1:3,23:26:66.20:760,66,0	1/1:3,14:17:36.11:415,36,0	1/1:3,11:14:33.10:381,33,0	1/1:0,11:10:27.08:311,27,0	1/1:2,8:10:24.07:277,24,0	1/1:3,16:18:45.13:519,45,0	1/1:2,17:19:51.15:588,51,0	1/1:3,17:20:39.11:450,39,0	1/1:2,8:10:24.07:277,24,0
chr10	33731348	.	G	GA	5852.37	PASS	AB=0.591;AC=39;AF=0.696;AN=56;BaseQRankSum=14.632;DP=451;FS=7.632;HRun=0;HaplotypeScore=145.8901;InbreedingCoeff=0.8303;MQ=51.20;MQ0=0;MQRankSum=-14.451;QD=19.25;ReadPosRankSum=4.463;VQSLOD=6.5707;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,14:18:1.17:216,1,0	1/1:0,4:4:11.95:101,12,0	0/0:12,0:11:25.28:0,25,288	0/0:8,0:6:15.05:0,15,204	0/0:35,0:35:87.27:0,87,1193	0/0:13,0:13:38.80:0,39,459	0/0:21,0:21:63.20:0,63,865	1/1:5,13:17:15.36:331,15,0	0/0:17,0:17:51.16:0,51,695	1/1:5,20:22:23.78:444,24,0	1/1:6,22:25:55.43:513,55,0	1/1:2,9:11:26.96:236,27,0	1/1:0,12:12:36.02:323,36,0	1/1:4,15:19:22.81:402,23,0	0/0:20,0:20:56.96:0,57,751	1/1:0,13:14:41.97:372,42,0	0/0:21,0:21:63.19:0,63,863	1/1:1,7:8:9.47:209,9,0	0/1:4,9:13:10.97:222,0,11	1/1:5,27:31:67.74:641,68,0	1/1:1,8:9:14.59:105,15,0	1/1:3,9:11:7.18:190,7,0	1/1:2,12:13:19.32:224,19,0	1/1:2,4:6:5.73:52,6,0	1/1:3,13:14:15.47:268,15,0	1/1:2,15:16:19.88:367,20,0	1/1:1,16:17:16.19:382,16,0	1/1:1,9:10:29.90:253,30,0
chr10	33731349	.	G	GGA	9070.31	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=14.292;DP=457;FS=7.162;HRun=0;HaplotypeScore=143.4813;InbreedingCoeff=0.9697;MQ=51.20;MQ0=0;MQRankSum=-14.700;QD=29.35;ReadPosRankSum=0.180;VQSLOD=6.2752;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,14:18:42.58:440,43,0	1/1:1,4:5:12.03:141,12,0	0/0:12,0:11:23.09:0,23,297	0/0:8,0:6:15.05:0,15,214	0/0:37,0:37:87.28:0,87,1309	0/0:12,0:12:33.06:0,33,453	0/0:21,0:21:60.20:0,60,918	1/1:6,13:18:48.07:575,48,0	0/0:17,0:17:51.16:0,51,759	1/1:6,20:23:66.13:779,66,0	1/1:5,21:24:63.11:701,63,0	1/1:2,9:11:30.08:352,30,0	1/1:0,12:12:36.11:443,36,0	1/1:3,15:18:54.09:636,54,0	0/0:20,0:20:57.17:0,57,832	1/1:2,13:15:42.13:512,42,0	0/0:21,0:21:63.20:0,63,941	1/1:3,6:9:18.53:240,19,0	1/1:4,9:13:36.93:422,37,0	1/1:4,27:31:83.39:952,83,0	1/1:2,8:10:15.18:157,15,0	1/1:3,9:11:29.25:318,29,0	1/1:2,12:13:33.07:368,33,0	1/1:1,4:5:5.81:73,6,0	1/1:4,13:15:41.27:465,41,0	1/1:2,15:16:45.99:558,46,0	1/1:2,16:18:47.98:585,48,0	1/1:1,9:10:30.08:354,30,0
chr10	33731357	.	A	AG	11647.08	PASS	AB=1.000;AC=41;AF=0.732;AN=56;BaseQRankSum=11.831;DP=476;FS=3.432;HRun=3;HaplotypeScore=128.9173;InbreedingCoeff=0.9099;MQ=50.71;MQ0=1;MQRankSum=-13.632;QD=34.26;ReadPosRankSum=-1.048;VQSLOD=3.6623;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,17:19:45.06:604,45,0	1/1:2,4:6:12.04:168,12,0	0/1:9,0:8:5.70:6,0,94	0/0:7,0:5:11.98:0,12,112	0/0:35,0:35:90.28:0,90,1080	0/0:13,0:13:36.11:0,36,432	0/0:22,0:22:66.18:0,66,771	1/1:4,15:18:42.14:587,42,0	0/0:18,0:18:51.16:0,51,612	1/1:2,24:24:69.16:935,69,0	1/1:4,23:24:66.22:912,66,0	1/1:1,10:11:33.11:456,33,0	1/1:2,11:13:36.03:476,36,0	1/1:1,19:20:60.16:815,60,0	0/0:21,0:21:60.18:0,60,720	1/1:2,15:17:42.14:586,42,0	0/0:20,0:20:60.17:0,60,708	1/1:0,10:10:30.10:420,30,0	1/1:4,14:17:45.15:628,45,0	1/1:2,31:32:96.09:1256,96,0	1/1:3,8:11:15.05:210,15,0	1/1:2,13:14:38.97:495,39,0	1/1:1,13:13:37.26:479,37,0	1/1:1,5:6:11.77:167,12,0	1/1:2,15:15:42.10:564,42,0	1/1:2,17:18:48.16:667,48,0	1/1:0,19:19:57.19:796,57,0	1/1:0,10:10:30.10:419,30,0
chr10	33734558	.	G	GT	18436.29	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-16.366;DP=702;FS=9.391;HRun=2;HaplotypeScore=64.1978;InbreedingCoeff=0.9999;MQ=78.71;MQ0=0;MQRankSum=-3.997;QD=39.65;ReadPosRankSum=2.379;VQSLOD=5.0066;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:63.20:0,63,780	1/1:0,18:18:45.12:626,45,0	0/0:27,0:27:38.47:0,38,807	0/0:17,0:17:38.79:0,39,450	0/0:26,0:26:74.99:0,75,876	0/0:32,0:32:90.28:0,90,1115	0/0:25,0:25:75.19:0,75,891	1/1:2,35:37:99:1449,102,0	0/0:33,0:33:93.29:0,93,1153	1/1:0,30:30:90.29:1279,90,0	1/1:0,19:19:54.18:777,54,0	1/1:0,24:24:69.23:993,69,0	1/1:0,31:31:84.28:1209,84,0	1/1:0,21:21:63.21:907,63,0	0/0:33,0:33:99:0,99,1225	1/1:1,23:24:35.06:956,35,0	0/0:22,0:22:63.20:0,63,781	1/1:0,19:19:54.18:778,54,0	1/1:2,23:25:69.22:975,69,0	1/1:1,23:24:66.18:927,66,0	1/1:1,28:29:75.25:1080,75,0	1/1:0,25:25:72.24:1037,72,0	1/1:0,27:27:69.23:994,69,0	1/1:1,17:17:51.17:734,51,0	1/1:2,17:19:45.15:648,45,0	1/1:0,37:37:99:1579,111,0	1/1:1,27:27:75.21:1056,75,0	1/1:0,10:10:30.10:432,30,0
chr10	33735757	.	CTTTT	C	5215.09	PASS	AB=0.692;AC=39;AF=0.696;AN=56;BaseQRankSum=1.779;DP=507;FS=0.000;HRun=16;HaplotypeScore=94.5095;InbreedingCoeff=0.7350;MQ=62.61;MQ0=7;MQRankSum=0.074;QD=13.87;ReadPosRankSum=7.372;VQSLOD=1.4613;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:10,2:37:50.14:98,0,50	1/1:3,5:8:12.43:158,12,0	0/0:16,0:14:26.82:0,27,367	0/1:4,0:3:9.84:10,0,42	0/0:20,0:23:47.79:0,48,554	0/0:8,0:17:27.05:0,27,384	0/0:7,0:14:14.99:0,15,228	0/1:12,11:19:9.75:271,0,10	0/0:13,0:14:38.99:0,39,561	1/1:8,12:23:40.13:522,40,0	1/1:4,8:12:17.92:226,18,0	1/1:9,0:15:17.63:141,18,0	1/1:6,12:17:23.90:307,24,0	1/1:6,6:15:20.37:218,20,0	0/0:7,0:13:23.99:0,24,276	1/1:3,7:10:11.95:158,12,0	0/0:11,0:31:24.88:0,25,374	1/1:2,7:10:17.82:217,18,0	1/1:9,13:25:44.91:500,45,0	1/1:9,13:25:12.77:173,13,0	1/1:3,8:11:14.85:175,15,0	1/1:7,15:22:20.78:323,21,0	1/1:9,0:24:14.87:233,15,0	1/1:4,0:23:44.82:353,45,0	1/1:5,10:16:23.82:294,24,0	1/1:7,11:18:26.33:275,26,0	1/1:9,9:22:24.11:248,24,0	1/1:1,10:11:24:316,24,0
chr10	33737213	.	CTACTTCT	C	9434.21	PASS	AC=38;AF=0.704;AN=54;BaseQRankSum=3.497;DP=409;FS=14.809;HRun=0;HaplotypeScore=135.1569;InbreedingCoeff=0.9205;MQ=54.40;MQ0=0;MQRankSum=-8.338;QD=41.74;ReadPosRankSum=5.349;VQSLOD=3.6746;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,16:13:18.06:502,18,0	1/1:0,3:3:3.48:84,3,0	0/0:18,0:13:33.11:0,33,967	0/0:33,0:30:74.35:0,74,2404	0/0:22,0:21:63.22:0,63,2560	0/0:13,0:11:30.10:0,30,1129	0/0:16,0:16:45.15:0,45,1513	1/1:0,7:7:21:460,21,0	0/0:21,0:19:51.16:0,51,1814	1/1:0,11:10:27.05:670,27,0	1/1:0,15:15:30.06:761,30,0	1/1:0,19:18:21.07:585,21,0	1/1:0,8:7:12.04:334,12,0	1/1:1,14:13:11.55:322,12,0	0/0:30,0:30:81.22:0,81,3075	1/1:0,13:12:17.96:501,18,0	0/0:28,0:27:57.14:0,57,1972	1/1:0,4:4:6.02:167,6,0	1/1:0,5:5:15.01:355,15,0	1/1:0,17:17:36.08:939,36,0	./.	1/1:0,14:13:9.03:250,9,0	1/1:0,11:11:18.06:501,18,0	1/1:0,11:10:21.07:580,21,0	1/1:0,13:13:21.07:585,21,0	1/1:0,10:10:27.09:751,27,0	1/1:0,23:20:26.79:752,27,0	1/1:0,10:10:11.79:334,12,0
chr10	33737236	.	TCCAATGACA	T	3928.68	PASS	AB=0.565;AC=9;AF=0.161;AN=56;BaseQRankSum=2.660;DP=471;FS=0.000;HRun=0;HaplotypeScore=169.2258;InbreedingCoeff=0.7837;MQ=41.85;MQ0=32;MQRankSum=-5.216;QD=56.12;ReadPosRankSum=1.092;VQSLOD=3.4094;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:19:42.14:0,42,1989	0/0:3,0:3:3.01:0,3,152	0/0:16,0:3:9.03:0,9,415	0/0:39,0:18:51.15:0,51,2085	1/1:3,15:18:36.11:800,36,0	1/1:1,7:8:21.07:517,21,0	1/1:0,12:12:36.12:886,36,0	0/0:15,0:13:39.10:0,39,1771	1/1:3,15:16:48.16:1125,48,0	0/0:16,0:15:36.11:0,36,1653	0/0:22,0:22:63.22:0,63,2842	0/0:22,0:21:27.09:0,27,1363	0/0:10,0:10:23.98:0,24,1193	0/0:17,0:15:24.08:0,24,1211	0/0:27,0:27:78.25:0,78,3745	0/0:22,0:22:48.04:0,48,2386	0/1:3,10:12:17.44:601,0,17	0/0:5,0:5:6.02:0,6,303	0/0:10,0:8:24.08:0,24,976	0/0:23,0:22:51.17:0,51,2223	0/0:4,0:4:11.99:0,12,386	0/0:16,0:15:18.06:0,18,634	0/0:16,0:16:23.97:0,24,1115	0/0:25,0:23:48.16:0,48,2216	0/0:18,0:18:36.12:0,36,1695	0/0:17,0:15:42.14:0,42,1928	0/0:27,0:25:42.14:0,42,1987	0/0:8,0:8:18.06:0,18,815
chr10	33737246	.	G	GT	1385.37	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=6.571;DP=514;FS=7.560;HRun=0;HaplotypeScore=134.4888;InbreedingCoeff=0.8873;MQ=41.64;MQ0=41;MQRankSum=-6.885;QD=16.11;ReadPosRankSum=0.952;VQSLOD=5.8360;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:23:45.06:0,45,579	0/0:5,0:5:9.01:0,9,108	0/0:22,0:3:6.02:0,6,75	0/0:39,0:12:30.10:0,30,410	1/1:4,15:19:32.59:235,33,0	1/1:2,7:8:20.95:168,21,0	1/1:6,12:18:50.83:401,51,0	0/0:19,0:15:42.14:0,42,584	1/1:4,19:21:50.85:429,51,0	0/0:15,0:14:36.12:0,36,499	0/0:25,0:25:63.20:0,63,862	0/0:21,0:20:32.96:0,33,445	0/0:10,0:10:24.08:0,24,335	0/0:19,0:18:26.96:0,27,377	0/0:26,0:26:72.24:0,72,1007	0/0:24,0:24:51.14:0,51,713	1/1:7,10:16:0.34:317,0,0	0/0:7,0:7:12.04:0,12,163	0/0:10,0:7:21.07:0,21,291	0/0:23,0:23:54.17:0,54,729	0/0:7,0:7:15.05:0,15,209	0/0:16,0:15:21.07:0,21,294	0/0:21,0:21:35.96:0,36,502	0/0:25,0:23:51.13:0,51,689	0/0:15,0:15:36.12:0,36,500	0/0:17,0:15:42.14:0,42,573	0/0:26,0:25:45.15:0,45,627	0/0:10,0:10:21.07:0,21,290
chr10	33738653	.	G	GA	3916.38	PASS	AB=0.697;AC=27;AF=0.482;AN=56;BaseQRankSum=-7.112;DP=584;FS=1.830;HRun=12;HaplotypeScore=72.9494;InbreedingCoeff=0.4033;MQ=56.30;MQ0=19;MQRankSum=-0.549;QD=10.85;ReadPosRankSum=-1.576;VQSLOD=2.9667;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,1:25:11.52:0,12,236	0/1:5,4:9:9.89:76,0,10	0/0:8,0:4:5.38:0,5,35	0/0:6,0:4:5.18:0,5,29	0/0:25,1:24:23.69:0,24,325	0/0:17,0:17:35.76:0,36,263	0/0:17,0:16:21.79:0,22,158	1/1:15,9:24:3.93:205,4,0	0/0:15,0:17:12.22:0,12,163	0/1:14,8:20:73.51:154,0,74	1/1:8,15:23:9.38:290,9,0	0/0:25,0:26:46.68:0,47,332	0/1:15,11:25:18.31:152,0,18	1/1:4,9:13:15.02:145,15,0	0/1:14,1:15:9.97:37,0,10	1/1:5,8:12:24.01:234,24,0	0/0:31,1:32:56.16:0,56,563	0/1:7,22:29:12.51:358,0,13	1/1:12,10:21:16.96:301,17,0	1/1:13,19:30:33.26:439,33,0	1/1:9,12:23:6.85:158,7,0	0/1:7,9:18:14.76:204,0,15	0/0:29,0:29:53.52:0,54,391	0/0:15,0:15:13.82:0,14,147	1/1:13,10:23:2.11:157,2,0	1/1:6,18:24:32.03:430,32,0	1/1:5,16:21:28.85:314,29,0	0/1:6,11:17:23.83:264,0,24
chr10	33738663	.	AAAG	A	325.10	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=0.594;DP=595;FS=2.510;HRun=0;HaplotypeScore=94.1144;InbreedingCoeff=0.5090;MQ=57.85;MQ0=11;MQRankSum=-4.284;QD=7.22;ReadPosRankSum=-3.370;VQSLOD=1.7198;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:33:56.38:0,56,1045	0/0:9,0:9:21.03:0,21,271	0/0:11,0:5:14.98:0,15,168	0/0:8,0:6:18.05:0,18,249	0/0:24,0:24:65.34:0,65,1071	0/0:19,0:19:51.09:0,51,864	0/0:14,0:13:30.90:0,31,461	0/0:27,0:28:28.53:0,29,735	0/0:21,0:21:38.51:0,39,805	0/0:26,0:25:40.08:0,40,883	0/0:28,0:28:27.94:0,28,924	0/0:23,0:23:66.05:0,66,1049	0/0:22,0:21:9.18:0,9,472	0/0:17,0:17:36.06:0,36,460	1/1:10,4:14:36:383,36,0	0/0:12,0:11:27.09:0,27,384	0/0:35,0:34:97.76:0,98,1720	0/0:28,0:28:54.09:0,54,743	0/0:24,0:22:0.04:0,0,629	0/1:31,0:30:47.86:48,0,725	0/0:17,0:16:29.08:0,29,329	0/0:19,0:19:15.88:0,16,485	0/0:32,0:31:90.12:0,90,1384	0/0:16,0:15:36.05:0,36,578	0/0:19,0:19:32.74:0,33,425	0/0:22,0:22:37.18:0,37,908	0/0:24,0:23:49.09:0,49,563	0/0:17,0:17:45.11:0,45,660
chr10	33740010	.	A	AGTACAATCTGTTAATAAAATGATTAC	4069.99	PASS	AB=0.800;AC=31;AF=0.969;AN=32;BaseQRankSum=-1.863;DP=59;FS=2.695;HRun=0;HaplotypeScore=43.1461;InbreedingCoeff=-0.1604;MQ=132.47;MQ0=0;MQRankSum=-1.471;QD=86.60;ReadPosRankSum=0.490;VQSLOD=2.3375;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	1/1:3,1:11:33.11:2066,33,0	0/1:3,0:4:51.74:198,0,52	1/1:2,0:2:6.02:207,6,0	./.	1/1:3,0:3:3.44:21,3,0	1/1:3,0:3:9.01:105,9,0	1/1:3,0:3:6.02:152,6,0	1/1:1,0:1:3.01:143,3,0	1/1:1,0:1:3.01:103,3,0	1/1:2,0:2:6.02:207,6,0	./.	1/1:2,0:2:3.01:49,3,0	1/1:5,0:5:9.03:256,9,0	1/1:3,0:3:6.01:129,6,0	./.	./.	./.	./.	1/1:1,0:1:2.98:21,3,0	./.	./.	./.	1/1:1,0:1:3.01:106,3,0	1/1:2,0:2:6.02:203,6,0	1/1:3,0:3:3.01:104,3,0	./.
chr10	33742379	.	AGC	A	1919.29	PASS	AC=12;AF=0.222;AN=54;BaseQRankSum=-6.450;DP=519;FS=2.535;HRun=0;HaplotypeScore=134.1410;InbreedingCoeff=0.9476;MQ=74.54;MQ0=4;MQRankSum=-0.500;QD=19.99;ReadPosRankSum=-1.605;VQSLOD=3.7976;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:81.10:0,81,900	0/0:9,0:9:15.04:0,15,166	./.	0/0:26,0:17:2.28:0,2,18	1/1:6,8:14:18.06:225,18,0	1/1:4,10:14:21.05:249,21,0	1/1:0,16:16:45.14:563,45,0	0/0:26,0:26:42.02:0,42,426	1/1:4,11:15:30.07:360,30,0	0/0:23,0:23:51.09:0,51,511	0/0:12,0:12:17.70:0,18,211	0/0:17,0:17:36.08:0,36,390	0/0:18,0:18:32.80:0,33,380	0/0:14,0:14:23.87:0,24,247	1/1:2,0:11:14.20:70,14,0	0/0:12,0:12:24.03:0,24,259	1/1:4,22:26:51.16:635,51,0	0/0:23,0:23:45.04:0,45,503	0/0:11,0:11:26.92:0,27,243	0/0:18,0:18:35.87:0,36,405	0/0:37,0:37:60.10:0,60,649	0/0:12,0:12:23.94:0,24,265	0/0:16,0:16:30.08:0,30,338	0/0:26,0:26:51.02:0,51,572	0/0:17,0:17:24.07:0,24,264	0/0:20,0:20:48.11:0,48,498	0/0:17,0:17:33.05:0,33,351	0/0:10,0:10:24.07:0,24,272
chr10	33742404	.	GCACACA	G	1797.21	PASS	AB=0.887;AC=24;AF=0.480;AN=50;BaseQRankSum=1.394;DP=537;FS=15.761;HRun=0;HaplotypeScore=161.4158;InbreedingCoeff=0.3567;MQ=48.32;MQ0=25;MQRankSum=-2.754;QD=5.84;ReadPosRankSum=-1.026;VQSLOD=1.2651;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:33:5.59:83,6,0	0/0:7,0:7:5.94:0,6,43	./.	./.	0/0:7,0:8:2.99:0,3,24	0/0:11,0:14:18.06:0,18,245	0/0:19,0:26:25.11:0,25,330	0/0:24,0:21:3.01:0,3,33	0/1:12,1:17:44.10:44,0,142	1/1:21,7:28:20.84:381,21,0	0/1:7,1:7:0:0,0,0	0/0:12,0:18:20.10:0,20,485	1/1:12,7:19:9.03:182,9,0	0/1:17,2:20:1.75:179,0,2	1/1:7,0:12:9.03:126,9,0	1/1:9,2:13:3.89:62,4,0	0/0:19,0:23:19.21:0,19,319	0/1:22,1:23:13.38:359,0,13	0/0:10,0:9:2.74:0,3,12	1/1:11,3:14:3.01:39,3,0	0/1:48,0:46:28.05:144,0,28	./.	0/0:11,0:13:6.02:0,6,126	0/0:17,0:27:27.54:0,28,556	1/1:14,1:14:6.02:72,6,0	1/1:22,0:21:2.81:27,3,0	0/1:16,1:19:15.62:80,0,16	1/1:6,10:16:9.03:182,9,0
chr10	33742410	.	A	ATG	750.80	PASS	AB=0.913;AC=10;AF=0.185;AN=54;BaseQRankSum=-0.213;DP=564;FS=18.702;HRun=0;HaplotypeScore=139.5378;InbreedingCoeff=-0.2380;MQ=46.44;MQ0=35;MQRankSum=-3.217;QD=3.18;ReadPosRankSum=-4.447;VQSLOD=-0.2907;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:44.42:0,44,604	0/0:7,0:7:16.87:0,17,230	./.	0/0:36,0:6:5.33:0,5,101	0/0:7,0:7:12.02:0,12,160	0/0:15,0:14:24.04:0,24,264	0/0:29,0:28:77.93:0,78,948	0/1:24,0:21:9.32:9,0,560	0/0:18,0:18:35.69:0,36,449	0/1:26,2:27:99:195,0,595	0/0:9,0:8:11.94:0,12,159	0/0:23,0:23:41.61:0,42,520	0/1:18,0:18:16.12:16,0,292	0/1:16,7:24:89.14:89,0,205	0/0:12,0:12:14.95:0,15,154	0/0:12,0:12:16.20:0,16,198	0/0:26,0:25:56.91:0,57,709	0/1:18,7:26:99:305,0,365	0/0:12,0:11:21.15:0,21,305	0/1:12,1:13:36.22:36,0,257	0/1:50,3:51:99:103,0,767	0/0:7,0:7:9.03:0,9,137	0/0:17,0:15:28.91:0,29,409	0/0:28,0:28:40.58:0,41,544	0/1:12,2:13:99:102,0,208	0/0:20,0:19:28.12:0,28,595	0/1:18,1:18:17.29:17,0,353	0/1:16,0:16:17.63:18,0,238
chr10	33744169	.	AG	A	2996.04	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=9.943;DP=689;FS=5.677;HRun=5;HaplotypeScore=65.6721;InbreedingCoeff=0.9962;MQ=83.72;MQ0=0;MQRankSum=-0.914;QD=26.51;ReadPosRankSum=1.482;VQSLOD=3.3789;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,126,1687	0/0:15,0:15:45.15:0,45,615	0/0:24,0:24:57.15:0,57,728	0/0:23,0:23:30.11:0,30,725	1/1:0,23:23:63.11:688,63,0	1/1:3,20:23:54.15:612,54,0	1/1:0,24:24:63.18:715,63,0	0/0:27,0:27:75.23:0,75,996	1/1:1,19:20:48.14:544,48,0	0/0:39,0:39:99:0,114,1514	0/0:16,0:16:42.13:0,42,558	0/0:26,0:26:78.26:0,78,1065	0/0:17,0:17:48.16:0,48,656	0/0:30,0:30:90.30:0,90,1221	0/0:23,0:23:66.22:0,66,902	0/0:26,1:27:47.21:0,47,996	1/1:2,21:23:54.15:612,54,0	0/0:18,0:18:51.17:0,51,697	0/0:19,0:19:51.13:0,51,639	0/0:30,0:30:84.25:0,84,1117	0/0:33,0:33:93.29:0,93,1248	0/0:21,0:21:60.20:0,60,820	0/0:20,0:20:60.16:0,60,772	0/0:24,0:24:72.21:0,72,950	0/0:17,0:17:48.16:0,48,657	0/0:33,0:33:90.27:0,90,1182	0/0:42,0:41:99:0,114,1541	0/0:5,0:5:15.02:0,15,172
chr10	33745076	.	C	CAAA	4551.51	PASS	AB=0.757;AC=47;AF=0.839;AN=56;BaseQRankSum=-0.238;DP=537;FS=0.834;HRun=17;HaplotypeScore=106.9111;InbreedingCoeff=0.1994;MQ=73.37;MQ0=6;MQRankSum=-1.567;QD=9.35;ReadPosRankSum=-3.930;VQSLOD=0.3713;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:14,0:22:17.95:18,0,43	0/1:3,0:7:16.41:16,0,21	0/1:31,0:18:12.59:13,0,56	0/0:21,0:13:3.70:0,4,40	1/1:11,10:23:41.82:361,42,0	0/1:14,1:29:11.86:124,0,12	1/1:5,0:15:22.35:189,22,0	1/1:13,5:21:23.96:276,24,0	1/1:16,0:16:17.94:178,18,0	1/1:13,0:30:44.83:432,45,0	1/1:11,4:23:9.35:305,9,0	1/1:10,1:10:11.07:144,11,0	1/1:9,0:10:14.85:140,15,0	1/1:8,0:16:8.93:78,9,0	0/0:12,0:29:34.42:0,34,208	1/1:13,8:22:18.95:285,19,0	1/1:10,10:23:7.74:101,8,0	1/1:4,0:12:3.90:40,4,0	1/1:7,3:13:8.06:222,8,0	1/1:19,0:19:32.81:307,33,0	1/1:6,0:7:8.06:81,8,0	1/1:11,6:23:37.48:331,37,0	1/1:8,0:16:17.92:187,18,0	1/1:4,5:13:6.42:44,6,0	1/1:12,8:23:12.92:166,13,0	1/1:11,0:21:5.38:270,5,0	0/1:15,4:22:3.82:196,0,4	1/1:6,5:14:2.60:48,3,0
chr10	33745570	.	AG	A	1250.96	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.684;DP=610;FS=1.191;HRun=7;HaplotypeScore=109.8498;InbreedingCoeff=0.9327;MQ=70.98;MQ0=1;MQRankSum=-2.645;QD=25.02;ReadPosRankSum=2.016;VQSLOD=3.3492;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,47:50:99:1346,132,0	0/0:12,0:12:33.10:0,33,412	0/0:29,0:23:43.53:0,44,490	0/0:27,1:21:8.16:0,8,390	0/0:33,0:33:99:0,99,1227	0/0:17,0:17:45.14:0,45,566	0/0:25,0:25:69.22:0,69,867	0/0:19,0:19:36.06:0,36,425	0/0:20,0:20:54.17:0,54,679	0/0:20,0:20:48.15:0,48,604	0/0:20,0:20:57.17:0,57,705	0/0:16,0:16:36.12:0,36,453	0/0:23,0:23:69.22:0,69,867	0/0:15,0:15:36.10:0,36,440	0/0:8,0:8:24.08:0,24,297	0/0:21,0:21:60.18:0,60,743	0/0:27,0:27:78.20:0,78,950	0/0:15,0:15:45.13:0,45,549	0/0:17,0:17:39.10:0,39,475	0/0:31,0:31:81.26:0,81,1019	0/0:20,0:20:60.17:0,60,740	0/0:17,0:17:42.13:0,42,528	0/0:18,0:18:48.13:0,48,578	0/0:22,0:22:54.17:0,54,679	0/0:12,0:12:36.10:0,36,439	0/0:34,0:34:96.30:0,96,1189	0/0:23,0:23:66.21:0,66,824	0/0:18,0:18:51.12:0,51,601
chr10	33746165	.	TC	T	1116.54	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=12.279;DP=441;FS=2.963;HRun=1;HaplotypeScore=100.5254;InbreedingCoeff=0.9717;MQ=84.73;MQ0=0;MQRankSum=-6.263;QD=13.29;ReadPosRankSum=1.452;VQSLOD=2.9426;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,13:15:24.47:147,24,0	0/0:4,0:4:12.04:0,12,192	0/0:14,0:14:42.05:0,42,591	0/0:22,0:22:51.11:0,51,842	1/1:0,12:12:21.06:137,21,0	1/1:1,6:7:15.82:93,16,0	1/1:1,4:5:10.13:66,10,0	0/0:24,0:24:72.20:0,72,1019	1/1:0,26:26:72.31:520,72,0	0/0:13,0:13:39.13:0,39,604	0/0:13,0:13:36.12:0,36,574	0/0:12,0:12:36.11:0,36,551	0/0:19,0:19:54.16:0,54,815	0/0:33,0:33:96.26:0,96,1437	1/1:3,11:14:36.21:291,36,0	0/0:27,0:27:78.25:0,78,1221	1/1:1,4:5:9.94:56,10,0	0/0:11,0:11:33.11:0,33,512	0/0:16,0:16:45.15:0,45,714	0/0:17,0:17:51.16:0,51,778	0/0:21,0:21:63.21:0,63,1005	0/0:7,0:7:18.06:0,18,288	0/0:10,0:10:27.09:0,27,430	0/0:18,0:18:54.17:0,54,822	0/0:15,0:15:45.13:0,45,678	0/0:24,0:23:72.23:0,72,1127	0/0:23,0:23:66.18:0,66,1027	0/0:14,0:14:42.12:0,42,624
chr10	33746168	.	A	AG	1355.77	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=12.889;DP=442;FS=4.719;HRun=0;HaplotypeScore=100.4717;InbreedingCoeff=0.9747;MQ=89.01;MQ0=0;MQRankSum=-6.719;QD=16.95;ReadPosRankSum=2.308;VQSLOD=6.2165;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,13:14:20.09:136,20,0	0/0:5,0:5:12.04:0,12,166	0/0:18,0:18:48.10:0,48,602	0/0:23,0:23:63.12:0,63,813	1/1:0,12:12:24.04:180,24,0	1/1:0,6:6:14.33:99,14,0	1/1:1,4:5:11.51:79,12,0	0/0:24,0:24:66.22:0,66,922	1/1:0,26:26:76.22:666,76,0	0/0:13,0:13:39.13:0,39,545	0/0:13,0:13:36.11:0,36,487	0/0:12,0:12:36.12:0,36,504	0/0:19,0:19:54.15:0,54,733	0/0:30,0:30:87.29:0,87,1214	1/1:1,11:12:34.90:313,35,0	0/0:28,0:28:81.26:0,81,1116	1/1:1,4:5:11.27:77,11,0	0/0:11,0:11:27.09:0,27,378	0/0:15,0:15:42.14:0,42,583	0/0:16,0:16:48.16:0,48,671	0/0:22,0:22:66.22:0,66,921	0/0:7,0:7:18.06:0,18,252	0/0:10,0:10:27.09:0,27,378	0/0:20,0:20:54.18:0,54,753	0/0:15,0:15:45.15:0,45,629	0/0:24,0:23:72.24:0,72,1007	0/0:23,0:23:66.22:0,66,923	0/0:14,0:14:42.14:0,42,585
chr10	33746173	.	TG	T	2438.43	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=12.831;DP=437;FS=6.500;HRun=2;HaplotypeScore=96.8260;InbreedingCoeff=0.9720;MQ=86.30;MQ0=0;MQRankSum=-6.452;QD=29.38;ReadPosRankSum=2.580;VQSLOD=3.0340;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,15:15:21.07:271,21,0	0/0:4,0:4:12.04:0,12,180	0/0:14,0:14:23.89:0,24,524	0/0:19,0:19:47.99:0,48,686	1/1:0,12:12:27.09:350,27,0	1/1:0,6:6:15.05:195,15,0	1/1:0,5:5:9.03:115,9,0	0/0:25,0:25:75.24:0,75,1086	1/1:1,27:28:84.27:1083,84,0	0/0:12,0:12:33.11:0,33,495	0/0:13,0:13:36.12:0,36,539	0/0:13,0:13:39.13:0,39,584	0/0:20,0:20:57.18:0,57,835	0/0:28,0:28:75.23:0,75,1102	1/1:0,13:13:36.12:462,36,0	0/0:31,0:31:90.30:0,90,1330	1/1:0,4:4:12.04:156,12,0	0/0:10,0:10:30.10:0,30,450	0/0:14,0:14:42.14:0,42,629	0/0:16,0:16:48.16:0,48,703	0/0:21,0:21:63.21:0,63,943	0/0:7,0:7:18.06:0,18,270	0/0:10,0:10:27.09:0,27,404	0/0:21,0:21:63.21:0,63,942	0/0:15,0:15:45.14:0,45,655	0/0:25,0:24:75.25:0,75,1124	0/0:23,0:23:66.22:0,66,988	0/0:13,0:13:39.09:0,39,560
chr10	33746236	.	AT	A	1814.43	PASS	AB=1.000;AC=30;AF=0.536;AN=56;BaseQRankSum=0.322;DP=442;FS=5.626;HRun=4;HaplotypeScore=86.0812;InbreedingCoeff=0.2631;MQ=77.65;MQ0=0;MQRankSum=-2.954;QD=6.43;ReadPosRankSum=6.064;VQSLOD=-0.1051;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,1:29:8.21:0,8,181	1/1:8,0:8:7.09:20,7,0	0/0:20,0:20:38.70:0,39,348	0/0:17,0:15:26.02:0,26,298	1/1:1,10:11:29.97:323,30,0	1/1:1,6:7:20.96:217,21,0	1/1:2,8:10:23.55:249,24,0	0/0:30,0:30:8.61:0,9,130	1/1:3,18:21:53.87:545,54,0	0/1:15,0:15:14.40:14,0,16	0/1:10,0:10:9.11:9,0,36	0/0:9,0:9:1.12:0,1,45	1/1:18,0:18:10.16:28,10,0	0/1:25,0:25:5.94:41,0,6	0/1:15,0:15:8.92:9,0,60	0/0:21,0:21:2.69:0,3,107	1/1:2,12:14:30.02:339,30,0	1/1:17,0:17:15.03:59,15,0	0/0:15,0:15:8.76:0,9,72	0/1:12,0:12:8.88:9,0,30	0/1:17,0:17:0.20:0,0,49	0/1:13,0:13:2.25:21,0,2	0/1:12,0:12:5.73:13,0,6	0/1:22,0:22:9.55:29,0,10	0/1:11,0:11:9.93:10,0,16	0/0:18,0:17:2.16:0,2,47	1/1:13,0:13:5.12:21,5,0	1/1:11,0:11:11.13:34,11,0
chr10	33746240	.	TA	T	6942.83	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-8.564;DP=434;FS=0.000;HRun=9;HaplotypeScore=65.4299;InbreedingCoeff=0.8668;MQ=76.76;MQ0=0;MQRankSum=-1.591;QD=19.61;ReadPosRankSum=4.838;VQSLOD=5.0701;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:59.53:0,60,766	1/1:0,8:8:24.01:220,24,0	0/0:20,0:19:37.83:0,38,336	0/0:15,0:13:10.28:0,10,248	1/1:11,0:11:3.31:62,3,0	1/1:7,0:7:12.81:48,13,0	1/1:10,0:10:10.11:60,10,0	1/1:5,25:30:74.99:675,75,0	1/1:19,0:19:31.84:138,32,0	1/1:1,14:15:42.01:379,42,0	1/1:2,8:10:21.01:191,21,0	1/1:2,7:9:21.01:192,21,0	1/1:0,17:17:47.89:439,48,0	1/1:1,23:24:60.03:549,60,0	0/0:16,0:16:39.08:0,39,428	1/1:5,15:20:39.01:357,39,0	1/1:14,0:14:4.53:94,5,0	1/1:1,16:17:45.02:411,45,0	1/1:2,13:15:7.38:316,7,0	1/1:1,10:11:26.93:237,27,0	1/1:3,14:17:33.01:302,33,0	1/1:0,13:13:30.01:274,30,0	1/1:0,11:11:24.01:220,24,0	1/1:1,23:24:60.03:549,60,0	1/1:1,10:11:27.01:247,27,0	1/1:1,15:15:45:406,45,0	1/1:1,13:14:33.02:302,33,0	1/1:0,11:11:30.02:274,30,0
chr10	33746368	.	TA	T	3136.74	PASS	AB=1.000;AC=26;AF=0.464;AN=56;BaseQRankSum=-10.298;DP=341;FS=4.833;HRun=1;HaplotypeScore=54.6492;InbreedingCoeff=0.1333;MQ=83.39;MQ0=6;MQRankSum=-2.049;QD=13.88;ReadPosRankSum=-2.462;VQSLOD=1.8721;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,19:20:53.77:720,54,0	0/0:2,0:2:5.21:0,5,21	0/0:29,2:21:29.32:0,29,678	0/0:25,1:14:36.56:0,37,484	1/1:0,20:20:60.06:752,60,0	1/1:1,4:4:9.03:125,9,0	1/1:0,8:8:21.07:292,21,0	0/1:22,0:22:56.34:114,0,56	1/1:0,11:11:33.11:460,33,0	0/0:11,0:11:22.72:0,23,66	0/0:10,0:10:2.72:0,3,47	0/1:9,0:9:12.88:82,0,13	0/1:9,0:9:10.11:10,0,29	0/1:15,0:15:47.39:47,0,58	1/1:0,5:5:15.05:209,15,0	0/0:7,0:7:15.84:0,16,48	1/1:0,9:9:24.08:335,24,0	0/1:6,0:6:11.72:12,0,27	0/1:11,0:11:2.58:3,0,41	0/0:13,0:13:5.89:0,6,81	0/1:10,0:10:6.10:6,0,38	0/1:9,0:9:32.57:33,0,39	0/1:13,0:13:43.98:50,0,44	0/0:7,0:7:17.10:0,17,60	0/1:14,0:14:52.65:53,0,54	0/1:19,0:19:13.51:14,0,68	0/1:11,0:11:8.09:8,0,47	0/0:8,0:8:20.22:0,20,75
chr10	33748354	.	T	TTCTG	232.42	PASS	AC=2;AF=0.053;AN=38;BaseQRankSum=-2.251;DP=547;FS=8.882;HRun=0;HaplotypeScore=26.5521;InbreedingCoeff=0.5697;MQ=16.35;MQ0=348;MQRankSum=-2.703;QD=23.24;ReadPosRankSum=1.682;VQSLOD=1.6374;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/0:20,0:1:3.01:0,3,44	./.	./.	./.	./.	./.	./.	./.	0/0:24,0:6:15.05:0,15,285	0/0:28,0:6:18.06:0,18,342	0/0:12,0:6:18.06:0,18,332	0/0:25,0:9:24.08:0,24,443	0/0:18,0:7:15.05:0,15,267	1/1:6,4:7:12.04:316,12,0	0/0:23,0:8:21.07:0,21,369	./.	0/0:13,0:7:21.07:0,21,374	0/0:9,0:2:6.02:0,6,114	0/0:47,0:9:27.09:0,27,500	0/0:16,0:12:36.12:0,36,670	0/0:25,0:4:6.02:0,6,101	0/0:35,0:12:18.03:0,18,305	0/0:30,0:9:15.02:0,15,249	0/0:27,0:5:12.04:0,12,224	0/0:22,4:6:18.06:0,18,329	0/0:24,0:3:6.02:0,6,114	0/0:25,0:8:24.08:0,24,440
chr10	33748616	.	CT	C	398.73	PASS	AC=18;AF=0.600;AN=30;BaseQRankSum=0.512;DP=508;FS=5.229;HRun=2;HaplotypeScore=13.1671;InbreedingCoeff=0.4420;MQ=13.68;MQ0=266;MQRankSum=-0.648;QD=2.51;ReadPosRankSum=2.218;VQSLOD=-0.6892;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,1:2:1.25:0,1,3	./.	0/0:19,0:3:5.98:0,6,53	0/0:19,0:1:3.01:0,3,45	./.	./.	./.	./.	1/1:21,1:1:3.01:39,3,0	1/1:2,2:1:3.01:39,3,0	./.	0/0:16,0:7:6.02:0,6,80	1/1:6,5:3:9.03:115,9,0	1/1:9,2:1:3.01:39,3,0	0/0:29,0:10:5.97:0,6,64	1/1:14,2:2:6.02:77,6,0	1/1:53,0:25:1.55:4,2,0	./.	./.	./.	./.	1/1:14,2:1:3.01:39,3,0	0/0:29,0:5:0:0,0,0	./.	./.	1/1:19,3:2:3.01:39,3,0	1/1:0,4:4:9.03:116,9,0	./.
chr10	33753475	.	AACACACAC	A	2063.92	PASS	AB=0.605;AC=13;AF=0.232;AN=56;BaseQRankSum=1.784;DP=458;FS=0.000;HRun=0;HaplotypeScore=157.5268;InbreedingCoeff=0.7831;MQ=66.50;MQ0=5;MQRankSum=-4.074;QD=19.11;ReadPosRankSum=-1.137;VQSLOD=2.7830;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,13:23:8.99:176,9,0	0/0:7,0:6:6.02:0,6,193	0/0:30,0:17:11.99:0,12,135	0/0:22,0:14:3.01:0,3,80	0/1:8,15:22:11.01:15,0,11	1/1:11,8:18:33.04:633,33,0	1/1:5,9:14:15.05:390,15,0	0/0:26,0:26:39.05:0,39,1133	1/1:3,4:7:15.05:361,15,0	0/0:19,0:18:45.15:0,45,1534	0/0:20,0:21:24.03:0,24,578	0/0:1,0:12:26.97:0,27,222	0/0:14,0:14:24.05:0,24,608	0/0:24,0:24:33.07:0,33,1085	1/1:4,8:12:21.07:510,21,0	0/0:10,0:9:21.03:0,21,624	1/1:8,2:10:6.02:156,6,0	0/0:5,0:6:9.02:0,9,212	0/0:24,0:23:39.12:0,39,1191	0/0:21,0:22:45.14:0,45,1349	0/0:9,0:8:12.03:0,12,384	0/0:14,0:14:18.03:0,18,484	0/0:3,0:22:17.98:0,18,149	0/0:7,0:13:8.92:0,9,74	0/0:15,0:15:18.06:0,18,662	0/0:19,0:18:48.16:0,48,1643	0/0:10,0:10:24.08:0,24,852	0/0:9,0:9:21.07:0,21,777
chr10	33753517	.	GCACACACACACA	G	4707.41	PASS	AB=0.678;AC=35;AF=0.648;AN=54;BaseQRankSum=-1.646;DP=439;FS=4.224;HRun=0;HaplotypeScore=169.5468;InbreedingCoeff=0.4646;MQ=37.51;MQ0=19;MQRankSum=1.109;QD=20.92;ReadPosRankSum=1.722;VQSLOD=3.3943;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:7,0:11:3.01:39,3,0	1/1:0,1:1:2.84:14,3,0	0/0:60,0:9:27.02:0,27,546	0/0:64,0:10:21.54:0,22,666	./.	0/0:14,0:17:6.25:0,6,83	0/1:10,0:11:25.08:25,0,32	1/1:5,8:12:24.07:744,24,0	0/1:10,0:11:23.68:45,0,24	1/1:6,1:10:12.04:284,12,0	1/1:2,11:16:3:25,3,0	0/0:6,0:12:6.02:0,6,100	1/1:1,4:7:9.75:400,10,0	0/1:3,6:14:13.01:19,0,13	1/1:2,0:13:6.45:65,6,0	1/1:2,5:9:12.04:236,12,0	0/0:5,0:7:13.57:0,14,147	1/1:1,2:4:0.87:17,1,0	1/1:4,0:5:8.98:75,9,0	1/1:2,9:17:6.02:211,6,0	1/1:7,0:6:1.55:4,2,0	0/1:1,7:11:0:0,0,0	0/0:15,0:21:17.06:0,17,221	0/0:11,0:13:11.94:0,12,176	0/1:2,8:13:0:1,0,0	1/1:7,9:19:49.75:1613,50,0	1/1:1,4:15:26.22:520,26,0	1/1:2,1:9:3.89:368,4,0
chr10	33753528	.	CACACACAG	C	3877.45	PASS	AB=0.989;AC=33;AF=0.589;AN=56;BaseQRankSum=2.976;DP=388;FS=42.635;HRun=0;HaplotypeScore=141.0859;InbreedingCoeff=0.0624;MQ=38.30;MQ0=20;MQRankSum=-0.496;QD=15.03;ReadPosRankSum=6.511;VQSLOD=1.2549;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:5,0:5:3.01:55,3,0	0/1:3,0:2:5.96:6,0,13	0/0:44,0:6:12.54:0,13,138	0/0:53,0:8:15.52:0,16,317	1/1:14,2:17:2.99:23,3,0	1/1:6,10:18:17.99:373,18,0	1/1:7,1:9:15.05:318,15,0	1/1:12,0:10:5.48:272,5,0	1/1:4,9:13:12.04:266,12,0	0/1:5,0:5:9.13:155,0,9	0/0:15,0:15:2.94:0,3,18	1/1:8,0:8:10.83:134,11,0	0/1:7,0:7:16.38:176,0,16	0/1:15,0:14:9.82:10,0,52	1/1:12,0:12:6.38:56,6,0	0/1:9,0:8:7.51:46,0,8	0/1:6,1:7:18.90:212,0,19	0/0:4,0:4:5.51:0,6,66	0/1:7,0:5:29.19:29,0,39	1/1:15,0:15:6.02:102,6,0	0/0:4,0:3:2.96:0,3,19	0/0:10,0:10:0:0,0,0	0/1:18,0:18:16.21:184,0,16	0/1:18,0:17:48.87:98,0,49	0/1:12,0:11:0:0,0,0	1/1:22,0:20:7.16:743,7,0	1/1:14,0:13:20.18:276,20,0	0/1:10,0:10:41.92:342,0,42
chr10	33755296	.	A	AC	6091.53	PASS	AB=0.606;AC=38;AF=0.679;AN=56;BaseQRankSum=-11.948;DP=493;FS=2.782;HRun=9;HaplotypeScore=66.1722;InbreedingCoeff=0.5019;MQ=81.55;MQ0=0;MQRankSum=-0.449;QD=16.73;ReadPosRankSum=-0.846;VQSLOD=4.8557;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:34:48.73:0,49,170	0/1:4,10:14:14.76:175,0,15	0/0:13,0:13:14.09:0,14,134	0/0:12,0:12:11.39:0,11,118	1/1:4,12:16:29.98:305,30,0	0/1:3,11:14:11.01:118,0,11	1/1:1,26:27:57.15:631,57,0	1/1:4,9:13:18.05:199,18,0	1/1:3,15:18:39.11:431,39,0	1/1:8,12:20:29.93:293,30,0	0/1:7,7:14:1.81:134,0,2	0/0:4,0:20:32.59:0,33,96	1/1:3,11:14:24.06:265,24,0	0/1:10,9:19:4.98:178,0,5	1/1:4,14:18:1.04:239,1,0	1/1:1,14:15:33.09:365,33,0	1/1:2,24:26:43.14:704,43,0	1/1:5,18:23:22.08:472,22,0	0/1:7,10:18:45.01:211,0,45	1/1:5,11:16:23.90:222,24,0	1/1:4,8:12:12.03:133,12,0	1/1:4,16:20:24.05:265,24,0	0/0:3,0:18:20.37:0,20,60	0/0:9,0:32:40.73:0,41,120	0/1:1,9:10:5:178,0,5	1/1:3,9:12:18.05:199,18,0	1/1:7,13:19:6.88:306,7,0	1/1:0,5:5:6.02:66,6,0
chr10	33755797	.	TC	T	8475.15	PASS	AB=0.571;AC=39;AF=0.696;AN=56;BaseQRankSum=-3.525;DP=545;FS=0.988;HRun=9;HaplotypeScore=65.2736;InbreedingCoeff=0.9038;MQ=75.79;MQ0=0;MQRankSum=-5.957;QD=20.18;ReadPosRankSum=3.920;VQSLOD=5.2993;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,33:39:72.33:754,72,0	1/1:0,7:7:17.66:164,18,0	0/0:14,0:12:19.27:0,19,257	0/0:20,1:21:13.93:0,14,350	0/0:2,0:5:6.15:0,6,29	0/0:9,0:14:25.04:0,25,158	0/0:10,0:22:20.22:0,20,134	0/1:4,12:16:5.11:198,0,5	0/0:14,0:20:31.85:0,32,227	1/1:5,15:20:48.02:438,48,0	1/1:5,15:20:39.02:356,39,0	1/1:1,22:23:66.04:603,66,0	1/1:2,25:27:60.03:549,60,0	1/1:3,13:16:30.02:274,30,0	0/0:16,1:17:20.67:0,21,492	1/1:2,16:18:39.02:357,39,0	0/0:3,0:12:14.29:0,14,86	1/1:2,15:17:36.02:329,36,0	1/1:5,18:23:53.97:485,54,0	1/1:7,24:31:60.01:549,60,0	1/1:4,32:36:87.04:796,87,0	1/1:3,11:14:33.01:301,33,0	1/1:3,16:19:48.03:439,48,0	1/1:1,15:16:45.02:412,45,0	1/1:2,9:11:24.01:219,24,0	1/1:6,26:32:40.35:610,40,0	1/1:4,20:24:16.65:451,17,0	1/1:2,9:11:21.01:192,21,0
chr10	33755936	.	T	TCA	3882.90	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-11.011;DP=631;FS=0.960;HRun=0;HaplotypeScore=114.2571;InbreedingCoeff=0.9988;MQ=77.27;MQ0=0;MQRankSum=-1.972;QD=40.87;ReadPosRankSum=2.176;VQSLOD=5.2263;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,129,1768	0/0:7,0:7:21.07:0,21,289	0/0:19,0:19:45.15:0,45,610	0/0:22,0:22:57.17:0,57,758	1/1:1,16:18:39.13:692,39,0	1/1:1,15:16:36.12:638,36,0	1/1:1,17:18:51.17:904,51,0	0/0:24,0:24:60.16:0,60,802	1/1:4,24:28:63.22:1117,63,0	0/0:27,0:27:75.21:0,75,1008	0/0:18,0:18:48.13:0,48,626	0/0:23,0:23:57.18:0,57,767	0/0:20,0:20:57.17:0,57,764	0/0:23,0:23:54.18:0,54,742	0/0:15,0:15:42.14:0,42,577	0/0:11,0:11:33.10:0,33,436	1/1:1,14:15:30.10:532,30,0	0/0:19,0:19:54.18:0,54,742	0/0:26,0:26:66.21:0,66,886	0/0:32,0:32:87.29:0,87,1196	0/0:30,0:30:75.23:0,75,1012	0/0:23,0:23:60.18:0,60,806	0/0:23,0:23:60.20:0,60,822	0/0:21,0:21:60.20:0,60,824	0/0:27,0:27:69.23:0,69,948	0/0:25,0:25:69.22:0,69,933	0/0:34,0:34:96.32:0,96,1316	0/0:17,0:17:48.16:0,48,660
chr10	33759179	.	TTGGTAAAA	T	2028.51	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=8.025;DP=674;FS=7.963;HRun=0;HaplotypeScore=170.2340;InbreedingCoeff=0.9967;MQ=77.46;MQ0=0;MQRankSum=-8.515;QD=61.47;ReadPosRankSum=-2.165;VQSLOD=2.8443;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,31:33:78.22:2123,78,0	0/0:12,0:12:36.12:0,36,1429	0/0:19,0:19:41.83:0,42,1373	0/0:14,0:14:23:0,23,704	0/0:31,0:31:90.31:0,90,3808	0/0:24,0:24:69.22:0,69,2836	0/0:19,0:19:57.20:0,57,2464	0/0:36,0:36:99:0,102,4260	0/0:10,0:10:30.10:0,30,1248	0/0:30,0:30:87.28:0,87,3469	0/0:25,0:25:75.26:0,75,3154	0/0:22,0:22:63.20:0,63,2653	0/0:20,0:20:57.20:0,57,2464	0/0:22,0:22:66.19:0,66,2791	0/0:27,0:27:81.28:0,81,3460	0/0:21,0:21:63.22:0,63,2681	0/0:15,0:15:45.15:0,45,1995	0/0:20,0:20:57.20:0,57,2398	0/0:16,0:16:45.15:0,45,1971	0/0:36,0:36:96.33:0,96,4239	0/0:25,0:25:75.26:0,75,3300	0/0:33,0:33:96.33:0,96,4058	0/0:24,0:24:72.23:0,72,3035	0/0:21,0:21:63.18:0,63,2381	0/0:37,0:37:99:0,102,4500	0/0:34,0:34:99:0,99,4087	0/0:26,0:26:78.27:0,78,3379	0/0:22,0:22:66.23:0,66,2870
chr10	33759773	.	CAGTACA	C	22388.52	PASS	AC=40;AF=0.741;AN=54;BaseQRankSum=13.208;DP=644;FS=3.682;HRun=0;HaplotypeScore=155.0367;InbreedingCoeff=0.9962;MQ=77.57;MQ0=0;MQRankSum=-16.374;QD=47.03;ReadPosRankSum=1.630;VQSLOD=4.9810;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,23:25:51.18:1128,51,0	1/1:3,5:8:15.05:335,15,0	0/0:22,0:22:42.14:0,42,1329	0/0:25,0:25:62.88:0,63,1885	0/0:16,0:16:42.08:0,42,1362	0/0:21,0:21:57.19:0,57,1818	0/0:25,0:25:72.25:0,72,2441	1/1:10,21:31:63.10:1255,63,0	0/0:26,0:26:75.24:0,75,2507	1/1:2,29:31:87.27:1831,87,0	1/1:2,20:22:51.18:1143,51,0	1/1:2,14:16:36.12:807,36,0	1/1:3,16:19:39.13:875,39,0	1/1:2,29:31:72.25:1615,72,0	1/1:2,29:31:66.23:1477,66,0	1/1:3,22:25:60.21:1344,60,0	0/0:30,0:30:87.28:0,87,2862	./.	1/1:4,13:17:39.06:668,39,0	1/1:5,32:37:78.27:1716,78,0	1/1:5,11:16:26.12:529,26,0	1/1:2,26:28:75.26:1644,75,0	1/1:1,14:15:27.74:605,28,0	1/1:2,22:24:24.40:538,24,0	1/1:2,16:18:42.14:927,42,0	1/1:1,28:29:81.25:1734,81,0	1/1:6,28:34:63.22:1411,63,0	1/1:3,16:19:36.12:807,36,0
chr10	33760007	.	G	GTACA	3845.28	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-10.556;DP=778;FS=4.152;HRun=0;HaplotypeScore=132.4979;InbreedingCoeff=0.8858;MQ=64.04;MQ0=0;MQRankSum=-0.708;QD=48.07;ReadPosRankSum=1.161;VQSLOD=4.2980;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:57.17:0,57,930	0/0:13,0:13:30.10:0,30,504	0/0:19,0:15:3.01:0,3,49	0/0:13,0:12:2.98:0,3,21	0/0:37,0:37:99:0,105,1724	0/0:27,0:27:69.24:0,69,1147	0/0:17,0:17:39.13:0,39,651	0/0:41,0:41:66.23:0,66,1095	0/0:34,0:34:96.31:0,96,1576	0/0:43,0:43:87.30:0,87,1459	0/0:31,0:31:69.24:0,69,1159	1/1:5,27:32:72.25:1765,72,0	0/0:34,0:34:84.27:0,84,1370	0/0:42,0:42:99:0,105,1652	0/0:24,0:24:48.16:0,48,802	0/0:29,0:29:72.25:0,72,1203	0/0:24,0:24:57.12:0,57,868	0/0:12,0:12:27.09:0,27,453	0/0:12,0:12:27.08:0,27,427	0/0:39,0:39:87.30:0,87,1461	0/0:30,0:30:66.23:0,66,1103	0/0:32,0:32:78.13:0,78,1284	1/1:5,17:22:35.96:890,36,0	1/1:4,22:26:48.16:1191,48,0	0/0:25,0:25:60.16:0,60,972	0/0:39,0:39:99:0,99,1630	0/0:39,0:39:87.30:0,87,1452	0/0:14,0:14:42.14:0,42,693
chr10	33760118	.	C	CAGAT	8282.31	PASS	AB=0.912;AC=44;AF=0.846;AN=52;BaseQRankSum=-6.978;DP=778;FS=0.710;HRun=0;HaplotypeScore=167.0002;InbreedingCoeff=0.2956;MQ=59.83;MQ0=5;MQRankSum=0.355;QD=11.67;ReadPosRankSum=0.047;VQSLOD=3.9816;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:30:0,30,330	0/0:9,0:9:5.99:0,6,50	./.	./.	1/1:11,14:26:9.03:213,9,0	1/1:10,19:29:21.07:479,21,0	1/1:18,0:18:5.82:75,6,0	1/1:50,0:46:28.18:131,28,0	1/1:10,13:23:18.06:426,18,0	1/1:19,20:40:40.98:773,41,0	1/1:14,17:32:11.96:281,12,0	1/1:20,1:21:30.08:545,30,0	0/1:25,0:25:58.07:58,0,206	1/1:18,14:35:21.07:493,21,0	0/1:27,0:27:43.25:43,0,126	1/1:8,11:20:9.03:212,9,0	1/1:11,12:23:5.53:141,6,0	1/1:10,18:30:18.06:423,18,0	1/1:5,6:11:15.03:304,15,0	0/1:22,25:48:13.05:200,0,13	1/1:10,16:27:12.35:348,12,0	1/1:16,19:36:18.06:423,18,0	1/1:11,18:30:8.58:211,9,0	1/1:8,14:22:14.82:352,15,0	1/1:38,0:37:21.70:172,22,0	1/1:13,24:39:72.03:1215,72,0	1/1:14,31:47:24.08:552,24,0	0/1:12,0:12:10.91:210,0,11
chr10	33760952	.	TA	T	15416.06	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=13.312;DP=600;FS=3.108;HRun=3;HaplotypeScore=93.1718;InbreedingCoeff=0.9998;MQ=77.49;MQ0=0;MQRankSum=-4.620;QD=33.59;ReadPosRankSum=4.118;VQSLOD=5.2108;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,33:34:96.30:1190,96,0	1/1:0,10:10:27:314,27,0	0/0:18,0:18:50.87:0,51,585	0/0:16,0:16:48.09:0,48,646	0/0:20,0:20:54.13:0,54,704	0/0:16,0:16:48.15:0,48,665	0/0:22,0:22:63.21:0,63,906	1/1:2,32:34:87.22:1027,87,0	0/0:19,0:19:51.16:0,51,718	1/1:1,19:20:51.12:594,51,0	1/1:1,16:17:42.13:520,42,0	1/1:1,23:24:69.22:855,69,0	1/1:0,17:17:48.15:595,48,0	1/1:0,16:16:48.15:595,48,0	1/1:0,14:14:39.12:483,39,0	1/1:1,16:17:48.15:595,48,0	0/0:30,0:30:90.25:0,90,1238	1/1:0,25:25:72.23:892,72,0	1/1:0,27:27:75.20:913,75,0	1/1:0,18:17:48.08:576,48,0	1/1:0,27:27:78.25:967,78,0	1/1:1,16:17:45.14:553,45,0	1/1:3,14:18:42.13:519,42,0	1/1:1,31:32:87.27:1078,87,0	1/1:0,18:18:48.15:595,48,0	1/1:0,25:25:75.17:886,75,0	1/1:0,26:26:69.22:851,69,0	1/1:0,23:23:66.21:818,66,0
chr10	33761887	.	ACG	A	15033.64	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=16.231;DP=661;FS=0.595;HRun=0;HaplotypeScore=120.3930;InbreedingCoeff=0.9905;MQ=88.03;MQ0=0;MQRankSum=-5.775;QD=42.83;ReadPosRankSum=3.686;VQSLOD=5.9899;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,141,2818	1/1:0,4:4:9.03:147,9,0	0/0:24,0:24:71.96:0,72,1231	0/0:25,0:25:65.32:0,65,1272	0/0:37,0:37:99:0,108,2150	0/0:21,0:21:63.22:0,63,1248	0/0:14,0:14:42.10:0,42,811	1/1:0,19:19:57.17:880,57,0	0/0:22,0:22:66.23:0,66,1319	1/1:0,31:31:90.28:1420,90,0	1/1:1,24:25:63.13:969,63,0	0/0:21,0:21:63.19:0,63,1200	1/1:0,20:20:54.18:880,54,0	1/1:0,24:24:66.23:1075,66,0	0/0:20,0:20:60.15:0,60,1141	1/1:0,27:27:66.04:1076,66,0	0/0:25,0:25:75.21:0,75,1454	1/1:0,13:13:24.08:391,24,0	1/1:0,30:30:87.27:1370,87,0	1/1:0,32:32:84.24:1340,84,0	1/1:0,31:31:75.21:1194,75,0	1/1:0,21:21:63.17:998,63,0	0/0:24,0:24:69.21:0,69,1320	0/0:29,0:29:87.26:0,87,1691	1/1:0,15:15:42.14:685,42,0	1/1:0,26:26:75.26:1223,75,0	1/1:0,27:27:69.19:1094,69,0	1/1:0,6:6:18.06:293,18,0
chr10	33762303	.	GA	G	8166	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=9.416;DP=543;FS=2.848;HRun=7;HaplotypeScore=57.5385;InbreedingCoeff=0.9973;MQ=85.05;MQ0=0;MQRankSum=-2.490;QD=27.13;ReadPosRankSum=0.380;VQSLOD=5.5517;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:69.08:0,69,804	1/1:0,5:5:15.03:153,15,0	0/0:23,0:23:48.61:0,49,575	0/0:20,0:20:36.96:0,37,428	0/0:31,0:31:93.29:0,93,1156	0/0:24,0:24:69.19:0,69,852	0/0:17,0:17:48.15:0,48,603	1/1:6,17:23:51.08:507,51,0	0/0:16,0:16:45.13:0,45,553	1/1:5,23:28:71.99:717,72,0	1/1:1,21:22:60.14:612,60,0	0/0:14,0:14:36.12:0,36,453	1/1:1,10:11:30.07:306,30,0	1/1:1,13:14:36.08:367,36,0	0/0:21,0:21:54.16:0,54,667	1/1:0,14:14:36.08:368,36,0	0/0:15,0:15:45.14:0,45,566	1/1:0,15:15:39.09:398,39,0	1/1:1,20:21:60.13:612,60,0	1/1:1,28:29:81.18:824,81,0	1/1:0,16:16:42.10:428,42,0	1/1:1,18:19:54.12:550,54,0	0/0:22,0:22:63.20:0,63,791	0/0:15,0:15:42.12:0,42,516	1/1:1,16:17:48.11:490,48,0	1/1:2,25:27:75.17:765,75,0	1/1:2,29:31:81.18:826,81,0	1/1:0,9:9:24.05:245,24,0
chr10	33762405	.	CAG	C	2030.45	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=10.721;DP=509;FS=7.394;HRun=0;HaplotypeScore=61.8574;InbreedingCoeff=0.9924;MQ=87.95;MQ0=0;MQRankSum=-4.162;QD=32.75;ReadPosRankSum=3.902;VQSLOD=5.6264;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,22:23:60.20:858,60,0	0/0:5,0:5:15.05:0,15,275	0/0:24,0:23:62.92:0,63,1006	0/0:13,0:13:30.10:0,30,499	0/0:21,0:21:63.20:0,63,1103	0/0:21,0:21:63.22:0,63,1136	0/0:14,0:14:36.10:0,36,621	0/0:20,0:20:57.18:0,57,974	0/0:21,0:21:63.22:0,63,1139	0/0:20,0:20:60.20:0,60,1064	0/0:19,0:19:51.14:0,51,874	1/1:0,11:11:30.10:430,30,0	0/0:13,0:13:39.13:0,39,703	0/0:12,0:12:36.12:0,36,653	0/0:16,0:16:48.13:0,48,809	0/0:15,0:15:39.12:0,39,675	0/0:21,0:21:60.19:0,60,1055	0/0:21,0:21:63.19:0,63,1104	0/0:20,0:20:57.20:0,57,1033	0/0:42,0:42:99:0,123,2224	0/0:17,0:17:51.17:0,51,935	0/0:23,0:23:66.20:0,66,1140	1/1:1,15:16:39.13:559,39,0	1/1:1,11:12:24.08:344,24,0	0/0:20,0:20:57.20:0,57,1044	0/0:19,0:19:54.19:0,54,975	0/0:23,0:23:69.20:0,69,1195	0/0:7,0:7:18.06:0,18,330
chr10	33764154	.	T	TATGACTTC	41629.71	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-10.103;DP=613;FS=1.932;HRun=0;HaplotypeScore=131.2119;InbreedingCoeff=0.9797;MQ=71.16;MQ0=0;MQRankSum=-15.796;QD=97.27;ReadPosRankSum=0.082;VQSLOD=5.6824;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,18:22:54.19:2489,54,0	1/1:0,6:11:21.07:871,21,0	0/0:24,0:24:66.09:0,66,1690	0/0:13,0:13:13.28:0,13,600	0/0:33,0:33:96.31:0,96,2714	0/0:22,0:21:63.15:0,63,1739	0/0:20,0:20:60.19:0,60,1697	1/1:1,10:27:72.20:2435,72,0	0/0:23,0:23:69.23:0,69,2007	1/1:0,23:34:98.99:3500,99,0	1/1:0,20:27:68.83:2712,69,0	1/1:0,19:21:54.19:2476,54,0	1/1:0,10:17:33.11:1502,33,0	1/1:0,22:25:66.23:3042,66,0	0/0:25,0:25:75.24:0,75,2151	1/1:0,12:18:36.12:1660,36,0	0/0:25,0:25:75.26:0,75,2194	1/1:0,9:12:21.07:930,21,0	1/1:0,8:18:51.10:1677,51,0	1/1:0,14:25:45.11:1954,45,0	1/1:1,4:5:15.05:623,15,0	1/1:0,22:26:60.21:2763,60,0	1/1:2,21:30:60.10:2647,60,0	1/1:2,11:16:15.01:690,15,0	1/1:0,19:26:54.19:2489,54,0	1/1:0,18:24:69.22:2902,69,0	1/1:1,28:41:84.29:3854,84,0	1/1:0,3:3:9.03:415,9,0
chr10	33764279	.	GGTTTT	G	1001.67	PASS	AB=0.973;AC=5;AF=0.089;AN=56;BaseQRankSum=7.015;DP=699;FS=0.754;HRun=0;HaplotypeScore=140.3062;InbreedingCoeff=0.3235;MQ=70.58;MQ0=2;MQRankSum=-1.378;QD=8.94;ReadPosRankSum=0.087;VQSLOD=2.2351;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,1:28:4.09:0,4,1469	0/0:11,0:11:30.10:0,30,860	0/0:29,0:24:23.91:0,24,496	0/1:30,0:22:34.96:35,0,303	0/0:37,0:37:87.30:0,87,2402	0/1:24,1:25:4.78:5,0,1305	0/0:22,0:22:48.16:0,48,1318	0/0:38,0:38:60.17:0,60,1592	0/0:20,0:20:45.14:0,45,1188	0/0:38,1:39:37.32:0,37,2457	0/0:31,0:31:87.30:0,87,2469	0/0:20,0:20:48.16:0,48,1132	0/0:27,0:27:63.22:0,63,1722	0/1:22,1:23:16.83:17,0,916	1/1:10,24:34:57.20:1063,57,0	0/0:16,0:16:36.08:0,36,885	0/0:27,0:27:60.21:0,60,1707	0/0:13,0:13:24.08:0,24,688	0/0:18,0:16:30.06:0,30,794	0/0:31,1:32:7.26:0,7,1631	0/0:17,0:17:36.11:0,36,972	0/0:15,0:15:33.11:0,33,926	0/0:20,0:20:57.20:0,57,1297	0/0:15,0:15:36.12:0,36,846	0/0:31,0:30:75.21:0,75,2046	0/0:26,0:26:57.20:0,57,1583	0/0:37,0:37:87.30:0,87,2466	0/0:18,0:18:45.15:0,45,1289
chr10	33765411	.	C	CG	1077.64	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-2.657;DP=708;FS=14.569;HRun=3;HaplotypeScore=104.9030;InbreedingCoeff=0.9987;MQ=85.77;MQ0=0;MQRankSum=-3.673;QD=30.79;ReadPosRankSum=2.103;VQSLOD=2.1004;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,33:35:84.28:1173,84,0	0/0:10,0:10:27.03:0,27,297	0/0:21,0:21:59.03:0,59,616	0/0:24,0:24:63.13:0,63,724	0/0:26,0:26:69.17:0,69,801	0/0:25,0:25:72.22:0,72,862	0/0:24,0:24:66.13:0,66,773	0/0:24,0:24:66.14:0,66,748	0/0:35,0:35:93.28:0,93,1113	0/0:25,0:25:69.16:0,69,785	0/0:19,0:19:54.16:0,54,647	0/0:21,0:21:60.12:0,60,679	0/0:31,0:31:90.25:0,90,1055	0/0:22,0:22:57.13:0,57,647	0/0:23,0:23:60.16:0,60,699	0/0:26,0:26:75.20:0,75,875	0/0:29,0:29:83.99:0,84,982	0/0:28,0:28:78.20:0,78,916	0/0:16,0:16:42.10:0,42,481	0/0:36,0:36:99:0,99,1134	0/0:39,0:39:99:0,111,1317	0/0:30,0:30:87.13:0,87,978	0/0:33,0:33:96.28:0,96,1139	0/0:27,0:27:75.23:0,75,898	0/0:20,0:20:57.01:0,57,646	0/0:23,0:23:63.02:0,63,728	0/0:25,0:25:75.15:0,75,878	0/0:11,0:11:33.09:0,33,382
chr10	33767250	.	CTA	C	5393	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=5.591;DP=612;FS=0.000;HRun=0;HaplotypeScore=100.5387;InbreedingCoeff=0.9992;MQ=88.13;MQ0=0;MQRankSum=0.507;QD=45.32;ReadPosRankSum=1.986;VQSLOD=6.0369;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,114,2261	0/0:12,0:12:36.12:0,36,720	0/0:22,0:22:63.22:0,63,1252	0/0:22,0:22:62.69:0,63,1163	1/1:0,28:28:84.28:1338,84,0	1/1:0,23:23:66.23:1076,66,0	1/1:1,23:24:60.20:975,60,0	0/0:21,0:21:63.18:0,63,1232	1/1:0,19:19:54.18:880,54,0	0/0:22,0:22:66.22:0,66,1307	0/0:20,0:20:51.17:0,51,1022	0/0:8,0:8:24.08:0,24,473	0/0:21,0:21:57.14:0,57,1079	0/0:20,0:20:57.20:0,57,1139	0/0:20,0:20:60.21:0,60,1219	0/0:17,0:17:42.14:0,42,844	1/1:0,25:25:69.24:1124,69,0	0/0:12,0:12:30.10:0,30,610	0/0:16,0:16:48.16:0,48,969	0/0:27,0:27:81.23:0,81,1604	0/0:27,0:27:72.25:0,72,1435	0/0:22,0:22:66.23:0,66,1340	0/0:27,0:27:63.10:0,63,1279	0/0:20,0:20:57.20:0,57,1143	0/0:22,0:22:60.19:0,60,1182	0/0:26,0:26:78.26:0,78,1543	0/0:35,0:35:99:0,102,2072	0/0:12,0:12:30.10:0,30,609
chr10	33767305	.	C	CT	5593.88	PASS	AB=0.988;AC=42;AF=0.750;AN=56;BaseQRankSum=8.801;DP=593;FS=3.614;HRun=8;HaplotypeScore=136.6544;InbreedingCoeff=0.8189;MQ=70.28;MQ0=5;MQRankSum=-4.169;QD=12.13;ReadPosRankSum=-2.651;VQSLOD=2.9616;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:37,0:37:89.49:690,89,0	1/1:13,0:13:23.21:179,23,0	0/1:38,1:24:2.53:3,0,154	0/1:32,0:21:3.48:3,0,15	0/0:26,0:26:47.01:0,47,420	0/0:22,0:22:48.02:0,48,439	0/0:27,0:27:69.01:0,69,623	1/1:24,0:26:29.68:178,30,0	0/0:22,0:22:56.93:0,57,497	1/1:15,0:15:34.55:222,35,0	1/1:17,0:20:45.15:295,45,0	1/1:9,5:14:30.86:273,31,0	1/1:17,0:17:36.55:226,37,0	1/1:19,0:19:38.38:251,38,0	0/0:8,0:8:2.82:0,3,61	1/1:16,0:16:8.32:214,8,0	0/0:27,0:27:56.95:0,57,500	1/1:16,0:16:25.92:213,26,0	1/1:17,0:17:35.55:247,36,0	1/1:23,0:25:52.10:338,52,0	1/1:23,0:23:50.20:353,50,0	1/1:20,0:20:47.12:327,47,0	1/1:3,11:14:9.03:104,9,0	1/1:8,5:13:22.03:211,22,0	1/1:20,0:21:46.63:314,47,0	1/1:23,0:24:58.57:396,59,0	1/1:28,0:29:70.77:469,71,0	1/1:7,0:7:14.08:88,14,0
chr10	33767318	.	GGGC	G	7868.15	PASS	AB=0.947;AC=33;AF=0.589;AN=56;BaseQRankSum=6.413;DP=569;FS=0.000;HRun=0;HaplotypeScore=133.5220;InbreedingCoeff=0.9064;MQ=72.10;MQ0=5;MQRankSum=-4.924;QD=24.36;ReadPosRankSum=2.075;VQSLOD=4.7242;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:37,0:37:65.95:268,66,0	1/1:10,0:10:20.98:257,21,0	0/0:39,0:23:37.64:0,38,461	0/0:32,0:19:13.66:0,14,287	0/0:24,0:24:66.23:0,66,1386	0/0:21,0:21:60.16:0,60,1190	0/0:30,0:30:81.15:0,81,1568	1/1:9,9:18:41.99:469,42,0	0/0:18,0:18:45.15:0,45,930	1/1:18,1:19:48.03:565,48,0	1/1:23,3:24:41.26:492,41,0	0/0:16,0:16:35.86:0,36,336	1/1:12,2:14:27.49:342,27,0	1/1:17,1:18:39.12:536,39,0	0/0:9,0:9:9.21:0,9,84	0/1:17,1:18:29.80:445,0,30	0/0:23,0:23:58.42:0,58,1178	1/1:16,0:16:26.87:330,27,0	1/1:9,0:9:26.99:351,27,0	1/1:21,2:23:57.13:764,57,0	1/1:25,0:25:45.13:624,45,0	1/1:21,2:23:38.92:539,39,0	0/0:14,0:14:15.40:0,15,188	0/0:20,0:20:13.34:0,13,339	1/1:18,1:19:36.12:517,36,0	1/1:18,0:18:42.07:527,42,0	1/1:21,2:23:51.12:638,51,0	1/1:6,1:7:15.05:206,15,0
chr10	33767319	.	GGC	G	6755.95	PASS	AB=1.000;AC=36;AF=0.643;AN=56;BaseQRankSum=8.055;DP=558;FS=0.378;HRun=0;HaplotypeScore=124.3450;InbreedingCoeff=0.6899;MQ=71.65;MQ0=5;MQRankSum=-5.243;QD=18.71;ReadPosRankSum=1.202;VQSLOD=5.1676;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:37,0:37:78.18:842,78,0	1/1:10,0:10:21.44:188,21,0	0/0:34,0:20:31.08:0,31,320	0/0:31,0:18:22.51:0,23,243	0/0:24,0:24:66.20:0,66,1120	0/0:21,0:21:60.17:0,60,991	0/0:30,0:30:81.07:0,81,1326	1/1:15,2:17:42.87:388,43,0	0/0:18,0:18:45.15:0,45,783	1/1:17,0:17:48.85:438,49,0	1/1:26,0:24:44.49:423,44,0	0/0:16,0:16:31.52:0,32,180	1/1:14,0:14:28.54:265,29,0	1/1:18,0:18:39.07:391,39,0	0/1:9,0:9:18.53:19,0,28	0/1:17,0:17:17.56:311,0,18	0/0:23,0:23:58.41:0,58,981	1/1:15,0:15:27.01:260,27,0	1/1:9,0:9:26.82:245,27,0	1/1:22,0:22:57.07:565,57,0	1/1:26,0:26:45.07:461,45,0	1/1:21,2:23:39.10:436,39,0	0/1:14,0:14:15.69:16,0,66	0/1:21,0:21:58.35:58,0,130	1/1:19,0:19:36.07:365,36,0	1/1:16,2:18:42.36:427,42,0	1/1:22,0:22:51.09:509,51,0	1/1:7,0:7:15.03:150,15,0
chr10	33767320	.	GC	G	8086.49	PASS	AB=0.766;AC=40;AF=0.714;AN=56;BaseQRankSum=7.855;DP=544;FS=2.863;HRun=1;HaplotypeScore=107.5278;InbreedingCoeff=0.8374;MQ=71.37;MQ0=5;MQRankSum=-3.062;QD=22.09;ReadPosRankSum=0.373;VQSLOD=4.9369;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,37:37:78.22:1055,78,0	1/1:0,9:9:21.51:252,22,0	0/0:33,1:20:32.17:0,32,261	0/0:30,2:18:15.67:0,16,149	0/0:23,0:23:64.44:0,64,863	0/0:21,0:21:60.11:0,60,789	0/0:30,0:30:79.72:0,80,1037	1/1:11,4:15:41.29:368,41,0	0/0:16,0:16:45.14:0,45,608	1/1:1,16:17:48.50:459,49,0	1/1:12,9:19:44.14:407,44,0	0/1:16,0:16:6.55:38,0,7	1/1:2,11:13:29.89:326,30,0	1/1:1,17:18:38.92:460,39,0	1/1:10,0:10:9.58:88,10,0	0/1:2,15:17:6.63:371,0,7	0/0:22,0:22:58.41:0,58,770	1/1:0,15:15:27.09:363,27,0	1/1:0,9:9:26.65:294,27,0	1/1:2,18:20:56.44:587,56,0	1/1:0,25:25:45.15:595,45,0	1/1:4,19:23:38.88:438,39,0	1/1:14,0:14:14.96:105,15,0	1/1:23,0:23:26.78:177,27,0	1/1:1,17:18:35.82:406,36,0	1/1:2,15:17:42.33:442,42,0	1/1:2,20:22:51.89:681,52,0	1/1:1,6:7:14.91:176,15,0
chr10	33769344	.	CCCGCTTCGGTTTCACAGT	C	44826.42	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=16.947;DP=506;FS=6.781;HRun=0;HaplotypeScore=287.0848;InbreedingCoeff=0.9881;MQ=94.78;MQ0=0;MQRankSum=-16.714;QD=133.02;ReadPosRankSum=6.697;VQSLOD=3.3347;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,17:17:39.13:2053,39,0	1/1:0,6:6:15.05:800,15,0	0/0:41,0:41:99:0,120,6877	0/0:16,0:16:48.16:0,48,2427	0/0:32,0:32:93.32:0,93,7597	0/0:23,0:23:69.24:0,69,5609	0/0:10,0:10:30.10:0,30,2605	1/1:0,6:6:15.04:464,15,0	0/0:26,0:26:78.27:0,78,6784	1/1:0,23:23:66.23:3415,66,0	1/1:0,22:22:57.20:2813,57,0	1/1:0,16:16:36.12:1924,36,0	1/1:0,11:11:30.10:1605,30,0	1/1:0,19:19:54.19:2813,54,0	1/1:0,17:17:39.13:2012,39,0	1/1:0,24:24:66.23:3531,66,0	0/0:21,0:21:60.16:0,60,4674	1/1:0,8:8:21.07:1052,21,0	1/1:0,8:8:21.07:899,21,0	1/1:0,24:24:66.23:3189,66,0	1/1:0,7:7:21.07:902,21,0	1/1:0,24:24:72.25:3552,72,0	1/1:0,24:24:63.07:3220,63,0	1/1:2,9:11:21.07:937,21,0	1/1:0,13:13:30.10:1458,30,0	1/1:0,27:27:81.28:3926,81,0	1/1:0,25:25:66.23:3458,66,0	1/1:0,5:5:15.05:802,15,0
chr10	33770100	.	G	GA	1195.38	PASS	AB=1.000;AC=10;AF=0.179;AN=56;BaseQRankSum=-4.867;DP=553;FS=5.350;HRun=10;HaplotypeScore=60.0778;InbreedingCoeff=0.7428;MQ=73.78;MQ0=1;MQRankSum=-0.036;QD=12.58;ReadPosRankSum=0.325;VQSLOD=3.2502;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:35:87:0,87,683	0/0:10,0:10:26.94:0,27,219	0/1:23,0:19:2.65:3,0,156	0/0:19,0:14:5.99:0,6,124	0/0:28,1:30:44.96:0,45,565	0/0:21,0:21:50.91:0,51,419	0/1:11,0:11:4.65:5,0,170	0/0:26,0:27:47.89:0,48,391	0/0:17,0:17:44.94:0,45,369	0/0:28,0:28:59.92:0,60,493	0/0:27,1:28:33.13:0,33,467	1/1:0,16:16:45.11:480,45,0	0/0:15,0:15:38.93:0,39,320	0/0:18,0:19:55.96:0,56,446	1/1:4,10:15:2.28:207,2,0	0/0:12,0:12:26.95:0,27,222	0/0:18,0:18:53.94:0,54,443	0/0:11,0:11:20.94:0,21,172	0/0:20,0:21:49.94:0,50,395	0/0:33,0:33:86.64:0,87,702	0/0:19,0:19:56.93:0,57,468	0/0:15,0:15:38.93:0,39,317	1/1:4,13:18:32.92:334,33,0	1/1:0,12:12:30.08:320,30,0	0/0:20,0:20:53.93:0,54,443	0/0:24,0:24:65.90:0,66,542	0/0:25,0:25:71.90:0,72,591	0/0:9,0:9:23.97:0,24,197
chr10	33771578	.	CATCCATTTGCCTATGAATTTCATAAAGTCATTGTTTATGA	C	14166.74	PASS	AC=40;AF=0.741;AN=54;BaseQRankSum=10.878;DP=250;FS=1.952;HRun=0;HaplotypeScore=238.8249;InbreedingCoeff=0.7404;MQ=57.70;MQ0=3;MQRankSum=-9.569;QD=157.41;ReadPosRankSum=4.510;VQSLOD=4.3283;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,4:4:6.02:560,6,0	1/1:0,3:3:9.03:943,9,0	0/0:18,0:11:33.11:0,33,2284	0/0:22,0:17:48.16:0,48,2779	0/0:36,0:36:99:0,105,15944	0/0:21,0:21:60.21:0,60,7999	0/0:11,0:11:30.10:0,30,3463	1/1:1,0:1:2.98:21,3,0	0/0:31,0:31:90.31:0,90,14466	1/1:0,6:5:15.04:477,15,0	1/1:1,9:10:12.04:1257,12,0	./.	1/1:0,5:5:9.03:943,9,0	1/1:1,2:3:6.02:629,6,0	1/1:0,4:4:6.02:629,6,0	1/1:0,3:3:9.03:943,9,0	0/0:21,0:21:60.21:0,60,8851	1/1:0,5:5:6.02:629,6,0	1/1:1,0:1:3:26,3,0	1/1:0,10:9:12:963,12,0	1/1:1,0:1:2.99:24,3,0	1/1:0,6:6:15.05:1572,15,0	1/1:0,6:6:12.04:1253,12,0	1/1:0,2:2:5.93:331,6,0	1/1:0,5:4:6.02:629,6,0	1/1:0,6:5:14.97:723,15,0	1/1:0,6:5:9.03:672,9,0	1/1:0,3:3:9.03:943,9,0
chr10	33774396	.	C	CA	1335.30	PASS	AB=0.819;AC=25;AF=0.446;AN=56;BaseQRankSum=-5.347;DP=386;FS=21.351;HRun=15;HaplotypeScore=68.7802;InbreedingCoeff=0.2543;MQ=52.43;MQ0=12;MQRankSum=-0.539;QD=6.01;ReadPosRankSum=-2.801;VQSLOD=0.1740;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:33:38.64:0,39,110	0/1:3,2:4:9.02:41,0,9	0/1:20,0:9:2.42:2,0,72	0/1:6,0:4:7.03:9,0,7	0/0:11,0:21:23.60:0,24,86	0/0:5,0:16:16.24:0,16,47	0/0:7,0:15:16.20:0,16,47	0/1:13,1:12:3.43:60,0,3	0/0:8,0:14:12.70:0,13,38	0/1:7,8:13:24.03:146,0,24	0/1:9,1:10:29.33:29,0,54	0/0:6,0:13:12.13:0,12,37	0/1:5,5:7:0:0,0,0	1/1:1,3:7:11.97:96,12,0	0/0:5,0:4:2.94:0,3,18	1/1:3,1:4:3:25,3,0	0/0:4,0:12:14.22:0,14,41	0/1:6,1:6:13.42:13,0,38	0/1:15,3:16:41.78:74,0,42	1/1:10,8:19:8.53:183,9,0	0/1:6,6:11:5.18:58,0,5	1/1:4,7:10:14.98:125,15,0	0/0:4,0:15:15.47:0,15,44	0/0:5,0:14:14.24:0,14,41	1/1:5,11:16:8.91:181,9,0	1/1:4,10:13:32.32:238,32,0	1/1:6,3:9:2.84:25,3,0	0/1:13,7:19:3.95:201,0,4
chr10	33774662	.	C	CT	290.71	PASS	AB=0.973;AC=23;AF=0.575;AN=40;BaseQRankSum=7.816;DP=238;FS=8.689;HRun=0;HaplotypeScore=41.8523;InbreedingCoeff=0.5882;MQ=70.24;MQ0=5;MQRankSum=-7.328;QD=2.97;ReadPosRankSum=-1.539;VQSLOD=1.0523;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:2,0:2:0:0,0,0	0/1:2,0:2:0:0,0,0	0/1:21,1:13:12.13:12,0,294	0/0:27,0:18:41.66:0,42,526	0/0:21,0:20:54.08:0,54,705	0/0:11,0:11:33.10:0,33,446	0/0:21,0:21:50.86:0,51,696	./.	0/0:18,0:18:54.18:0,54,754	1/1:7,0:5:8.87:29,9,0	./.	./.	1/1:6,0:1:2.97:20,3,0	1/1:12,1:6:8.81:69,9,0	0/1:7,0:4:0:0,0,0	1/1:6,0:2:3.01:36,3,0	0/0:28,0:28:78.26:0,78,1080	./.	./.	1/1:6,1:7:4.37:39,4,0	./.	1/1:1,1:2:2.61:34,3,0	./.	./.	1/1:7,0:6:7.35:61,7,0	1/1:6,0:4:7.91:35,8,0	1/1:8,0:8:9.34:84,9,0	1/1:4,0:3:5.45:15,5,0
chr10	33775136	.	A	ACTTGC	1452.79	PASS	AC=18;AF=0.643;AN=28;BaseQRankSum=4.416;DP=579;FS=2.759;HRun=0;HaplotypeScore=34.5224;InbreedingCoeff=0.7041;MQ=12.74;MQ0=353;MQRankSum=-2.314;QD=7.90;ReadPosRankSum=2.779;VQSLOD=1.3477;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:42,4:4:9.03:253,9,0	1/1:4,3:1:3.01:90,3,0	./.	./.	0/0:23,0:5:15.01:0,15,299	0/0:30,0:15:27.06:0,27,531	0/0:52,0:10:18.02:0,18,362	./.	0/0:25,0:7:21.07:0,21,482	./.	./.	1/1:20,4:4:9.03:263,9,0	1/1:11,2:1:3.01:88,3,0	1/1:8,3:3:6.02:176,6,0	1/1:11,2:2:6.02:176,6,0	./.	0/0:64,0:14:14.82:0,15,349	1/1:17,4:1:3.01:90,3,0	./.	./.	./.	./.	./.	1/1:29,6:7:8.99:258,9,0	./.	./.	1/1:12,2:2:6.02:189,6,0	./.
chr10	33782954	.	C	CAAAG	21324.87	PASS	AB=0.538;AC=40;AF=0.714;AN=56;BaseQRankSum=7.380;DP=567;FS=0.000;HRun=0;HaplotypeScore=96.8002;InbreedingCoeff=0.8032;MQ=57.40;MQ0=5;MQRankSum=-3.853;QD=53.45;ReadPosRankSum=1.553;VQSLOD=5.7387;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,33:39:86.11:2193,86,0	1/1:1,3:4:9.03:235,9,0	0/0:23,0:15:7.86:0,8,500	0/0:13,0:10:18.03:0,18,290	0/0:38,0:38:99:0,99,1767	0/0:22,0:22:60.21:0,60,1089	0/0:15,0:15:39.13:0,39,708	0/1:3,19:17:9.39:819,0,9	0/0:23,0:23:63.20:0,63,1114	1/1:3,26:29:78.25:1898,78,0	1/1:2,20:22:45:990,45,0	1/1:2,3:5:9.03:235,9,0	1/1:2,10:12:30.10:783,30,0	1/1:1,5:7:18.06:452,18,0	0/1:3,15:17:6.07:1122,0,6	1/1:1,13:15:36.12:942,36,0	0/0:32,0:31:87.24:0,87,1541	1/1:1,20:22:54.16:1357,54,0	1/1:4,17:22:60.16:1366,60,0	1/1:3,21:25:60.14:1497,60,0	1/1:3,6:9:15.05:393,15,0	1/1:3,25:27:57.02:1367,57,0	1/1:2,18:20:45.15:1170,45,0	1/1:1,10:12:20.82:548,21,0	1/1:2,17:19:45.15:1177,45,0	1/1:5,14:16:45.13:1054,45,0	1/1:9,21:27:57.20:1490,57,0	1/1:5,4:7:9.03:235,9,0
chr10	33783748	.	CT	C	2315.36	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=6.133;DP=585;FS=12.770;HRun=1;HaplotypeScore=117.2185;InbreedingCoeff=0.9625;MQ=77.36;MQ0=0;MQRankSum=-0.722;QD=35.08;ReadPosRankSum=2.330;VQSLOD=2.0993;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,141,2216	0/0:10,0:10:30.08:0,30,451	0/0:18,0:18:52.41:0,52,793	0/0:23,0:23:63.21:0,63,991	0/0:27,0:27:72.20:0,72,1081	0/0:11,0:11:33.11:0,33,527	0/0:20,0:20:60.20:0,60,951	0/0:23,0:23:69.23:0,69,1084	0/0:23,0:23:69.24:0,69,1103	0/0:20,0:20:57.19:0,57,885	0/0:8,0:8:24.08:0,24,384	1/1:0,23:23:63.21:879,63,0	0/0:10,0:10:30.10:0,30,477	0/0:20,0:20:60.19:0,60,936	0/0:16,0:16:45.13:0,45,693	0/0:21,0:21:63.21:0,63,1003	0/0:28,0:28:84.29:0,84,1343	0/0:15,0:15:42.12:0,42,636	0/0:24,0:24:69.21:0,69,1077	0/0:20,0:20:60.20:0,60,951	0/0:49,0:49:99:0,147,2301	0/0:16,0:16:42.14:0,42,670	1/1:1,20:21:57.19:784,57,0	1/1:0,22:22:57.19:795,57,0	0/0:11,0:11:33.10:0,33,505	0/0:26,0:26:78.27:0,78,1240	0/0:29,0:29:84.29:0,84,1343	0/0:3,0:3:6.02:0,6,96
chr10	33785265	.	T	TA	11484.09	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=-10.847;DP=601;FS=10.999;HRun=8;HaplotypeScore=63.8894;InbreedingCoeff=0.9945;MQ=64.43;MQ0=0;MQRankSum=0.027;QD=26.16;ReadPosRankSum=1.501;VQSLOD=5.1649;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,17:20:39.11:447,39,0	1/1:2,6:8:18.05:208,18,0	0/0:20,0:15:31.74:0,32,267	0/0:12,0:8:21.01:0,21,191	0/0:29,0:29:69.03:0,69,631	0/0:21,0:22:56.06:0,56,500	0/0:15,0:15:39.02:0,39,357	1/1:3,26:29:78.15:863,78,0	0/0:26,0:26:75.02:0,75,681	1/1:5,29:33:84.20:938,84,0	1/1:3,32:35:84.21:955,84,0	1/1:1,8:9:21.06:242,21,0	1/1:3,15:18:42.12:484,42,0	1/1:2,31:33:81.24:935,81,0	1/1:1,0:15:36.93:188,37,0	1/1:1,11:12:27.08:312,27,0	0/0:36,0:38:95.27:0,95,856	1/1:3,13:15:21.06:239,21,0	1/1:3,29:32:84.19:931,84,0	1/1:3,27:30:75.18:848,75,0	1/1:4,9:13:32.67:343,33,0	1/1:2,17:19:51.15:586,51,0	1/1:5,31:36:73.39:833,73,0	1/1:1,8:9:24.07:274,24,0	1/1:0,9:9:21.06:242,21,0	1/1:2,26:28:78.23:898,78,0	1/1:5,18:24:38.69:447,39,0	1/1:1,9:9:24.07:273,24,0
chr10	33785408	.	G	GA	7801.59	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=9.152;DP=591;FS=12.490;HRun=9;HaplotypeScore=109.1269;InbreedingCoeff=0.9465;MQ=62.53;MQ0=2;MQRankSum=-2.060;QD=17.81;ReadPosRankSum=-2.289;VQSLOD=3.3668;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:12,27:41:45.09:571,45,0	1/1:0,5:5:15.01:152,15,0	0/0:20,0:16:32.95:0,33,281	0/0:20,0:17:19.12:0,19,276	0/0:29,0:28:71.75:0,72,624	0/0:12,0:12:35.99:0,36,313	0/0:17,0:17:38.98:0,39,338	1/1:13,20:30:42.25:496,42,0	0/0:20,0:20:56.99:0,57,495	1/1:5,23:28:48.90:563,49,0	1/1:3,16:21:47.81:449,48,0	1/1:1,9:10:27.07:298,27,0	1/1:3,11:14:1.62:109,2,0	1/1:16,7:22:28.92:349,29,0	1/1:2,0:15:19.76:98,20,0	1/1:3,13:16:30.08:329,30,0	0/0:34,0:34:77.97:0,78,676	1/1:10,7:16:22.16:329,22,0	1/1:11,9:21:31.96:416,32,0	1/1:6,16:23:15.34:357,15,0	1/1:12,12:25:30.17:468,30,0	1/1:8,21:28:47.07:491,47,0	1/1:4,27:29:52.04:623,52,0	1/1:1,9:10:24.06:265,24,0	1/1:3,10:13:24:266,24,0	1/1:4,17:22:43.53:536,44,0	1/1:19,11:29:41.37:532,41,0	1/1:3,4:7:11.52:104,12,0
chr10	33785417	.	AC	A	4613.13	PASS	AB=1.000;AC=37;AF=0.661;AN=56;BaseQRankSum=10.210;DP=595;FS=15.692;HRun=1;HaplotypeScore=119.9902;InbreedingCoeff=0.9360;MQ=62.64;MQ0=2;MQRankSum=-2.873;QD=11.95;ReadPosRankSum=-1.081;VQSLOD=2.0173;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:39,0:39:62.72:349,63,0	1/1:6,0:6:15.63:84,16,0	0/0:25,0:20:59.85:0,60,646	0/0:21,1:19:26.87:0,27,562	0/0:35,0:34:92.81:0,93,1167	0/0:15,0:15:42.11:0,42,551	0/0:15,0:15:38.96:0,39,543	1/1:33,0:30:76.38:555,76,0	0/0:20,0:20:60.19:0,60,819	1/1:26,0:25:49.81:365,50,0	1/1:20,1:21:44.54:252,45,0	0/1:10,0:10:3.33:3,0,126	1/1:16,0:16:18.22:143,18,0	1/1:20,0:19:29.92:210,30,0	1/1:15,0:15:25.55:154,26,0	1/1:16,0:16:35.87:205,36,0	0/0:37,0:37:70.49:0,70,1167	1/1:14,1:14:33.23:210,33,0	1/1:20,0:18:39.85:230,40,0	1/1:20,0:20:36.87:222,37,0	1/1:27,0:26:49.95:323,50,0	1/1:29,0:29:51.53:295,52,0	0/0:32,0:29:36.32:0,36,368	0/0:8,0:8:23.33:0,23,132	1/1:13,0:12:23.72:119,24,0	1/1:27,0:27:69.18:466,69,0	1/1:24,3:26:59.49:377,59,0	1/1:6,0:6:11.12:51,11,0
chr10	33785735	.	T	TC	8934.80	PASS	AC=52;AF=1.000;AN=52;BaseQRankSum=0.695;DP=292;FS=0.000;HRun=0;HaplotypeScore=330.3211;InbreedingCoeff=-0.0261;MQ=28.88;MQ0=0;MQRankSum=-0.695;QD=30.60;ReadPosRankSum=-0.864;VQSLOD=2.8309;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,3:7:19.30:237,19,0	1/1:2,3:5:12.02:158,12,0	./.	./.	1/1:10,16:26:54.15:676,54,0	1/1:5,13:17:45.15:617,45,0	1/1:3,1:2:3.01:42,3,0	1/1:6,0:4:4.89:55,5,0	1/1:5,11:16:45.13:572,45,0	1/1:9,8:16:47.99:592,48,0	1/1:6,7:13:27.09:353,27,0	1/1:3,6:9:27.08:339,27,0	1/1:5,5:10:21.02:257,21,0	1/1:2,7:9:27.09:375,27,0	1/1:5,6:11:27.08:335,27,0	1/1:4,3:7:18.05:215,18,0	1/1:6,4:9:20.76:204,21,0	1/1:3,2:5:11.17:145,11,0	1/1:4,4:7:15.05:208,15,0	1/1:5,6:11:27.08:347,27,0	1/1:5,3:8:13.56:186,14,0	1/1:7,13:20:48.15:637,48,0	1/1:5,14:18:51.15:673,51,0	1/1:1,2:3:2.35:27,2,0	1/1:3,6:9:24.08:329,24,0	1/1:7,7:14:36.11:487,36,0	1/1:8,16:23:60.18:786,60,0	1/1:1,2:3:6.01:85,6,0
chr10	33785766	.	AG	A	13136.19	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-0.699;DP=397;FS=0.000;HRun=1;HaplotypeScore=195.2735;InbreedingCoeff=0.7499;MQ=45.03;MQ0=0;MQRankSum=-1.748;QD=33.43;ReadPosRankSum=2.890;VQSLOD=4.4079;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,12:13:30.01:353,30,0	1/1:0,10:10:27.09:373,27,0	0/0:2,0:2:5.88:0,6,42	0/0:2,0:2:2.15:0,2,46	1/1:0,33:33:79.71:1005,80,0	1/1:0,20:19:54.18:753,54,0	1/1:0,8:5:15.03:187,15,0	1/1:0,9:5:15.05:206,15,0	1/1:0,23:23:66.20:899,66,0	1/1:0,18:17:51.15:694,51,0	1/1:0,14:14:42.12:568,42,0	1/1:0,16:15:42.14:572,42,0	1/1:1,13:14:33.04:433,33,0	1/1:0,19:19:51.12:657,51,0	1/1:0,13:13:27.09:376,27,0	1/1:1,13:14:39.13:540,39,0	1/1:0,11:11:12.14:252,12,0	1/1:1,8:9:24.01:311,24,0	1/1:0,8:6:12:143,12,0	1/1:0,22:22:57.09:732,57,0	1/1:0,9:9:27.07:345,27,0	1/1:0,16:16:39.06:520,39,0	1/1:0,23:23:60.18:819,60,0	1/1:0,5:5:12.04:162,12,0	1/1:0,12:12:36.12:498,36,0	1/1:0,14:14:39.12:527,39,0	1/1:0,30:30:75.18:1005,75,0	1/1:0,10:10:15.05:206,15,0
chr10	33786181	.	CAA	C	3058.72	PASS	AB=0.681;AC=46;AF=0.821;AN=56;BaseQRankSum=-2.128;DP=439;FS=5.867;HRun=16;HaplotypeScore=59.6642;InbreedingCoeff=0.2035;MQ=62.63;MQ0=9;MQRankSum=2.078;QD=8.29;ReadPosRankSum=5.239;VQSLOD=0.5765;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:9,9:20:23.31:106,0,23	1/1:6,2:9:17.33:123,17,0	0/0:31,1:11:8.88:0,9,63	0/0:37,0:15:19.10:0,19,196	1/1:9,12:24:20.90:251,21,0	0/1:2,5:7:11.99:63,0,12	1/1:3,6:11:26.46:197,26,0	0/1:7,11:14:5.32:105,0,5	0/1:7,3:10:9.41:79,0,9	1/1:12,3:18:8.73:98,9,0	1/1:13,8:22:30.26:262,30,0	0/1:7,0:10:10.67:14,0,11	1/1:5,2:7:10.04:84,10,0	1/1:4,3:7:14.71:111,15,0	1/1:8,0:18:4.76:81,5,0	1/1:5,5:11:23.68:187,24,0	1/1:8,4:15:8.26:90,8,0	1/1:7,5:10:9.36:76,9,0	0/1:9,6:14:1.71:154,0,2	1/1:11,10:22:23.10:247,23,0	1/1:5,1:8:2.27:40,2,0	1/1:18,6:24:2.42:125,2,0	1/1:6,2:16:19.14:93,19,0	1/1:3,0:6:10.84:46,11,0	1/1:2,6:9:11.62:107,12,0	1/1:6,5:12:17.32:119,17,0	1/1:14,1:16:16.91:118,17,0	1/1:1,9:12:23.68:229,24,0
chr10	33787353	.	TA	T	4272.37	PASS	AC=38;AF=0.731;AN=52;BaseQRankSum=3.111;DP=310;FS=0.000;HRun=10;HaplotypeScore=32.6560;InbreedingCoeff=0.8865;MQ=56.68;MQ0=8;MQRankSum=0.837;QD=19.69;ReadPosRankSum=0.036;VQSLOD=4.6973;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,16:19:32.49:375,32,0	1/1:0,6:6:12:104,12,0	0/0:10,0:1:2.88:0,3,15	./.	0/0:29,0:27:63.13:0,63,683	0/0:12,0:12:33.09:0,33,364	0/0:8,0:8:20.91:0,21,201	1/1:8,8:12:17.96:156,18,0	0/0:4,0:4:6.02:0,6,66	1/1:2,12:14:35.99:313,36,0	1/1:2,16:18:41.99:365,42,0	1/1:2,4:6:9:78,9,0	1/1:0,4:4:9:78,9,0	1/1:1,5:6:12:104,12,0	0/0:0,0:9:22.76:0,23,114	1/1:0,4:4:9:78,9,0	0/0:12,0:11:27.07:0,27,298	1/1:1,11:12:24:208,24,0	1/1:2,11:12:32.96:281,33,0	1/1:1,22:22:62.99:547,63,0	1/1:1,9:10:17.98:156,18,0	./.	1/1:0,6:5:12:104,12,0	1/1:3,4:6:11.98:104,12,0	1/1:2,14:16:35.99:312,36,0	1/1:0,16:16:44.97:387,45,0	1/1:1,11:12:32.99:286,33,0	1/1:0,9:9:26.99:234,27,0
chr10	33789372	.	TA	T	7617.58	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=11.994;DP=481;FS=1.188;HRun=7;HaplotypeScore=71.3147;InbreedingCoeff=0.9953;MQ=59.28;MQ0=5;MQRankSum=1.420;QD=25.82;ReadPosRankSum=-0.348;VQSLOD=5.2854;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:51.16:0,51,640	1/1:1,7:8:21.05:214,21,0	0/0:13,0:7:18.05:0,18,214	0/0:16,0:8:18:0,18,191	0/0:21,0:21:63.20:0,63,792	0/0:13,0:13:33.11:0,33,414	0/0:9,0:9:27.09:0,27,339	1/1:2,27:29:78.16:788,78,0	0/0:22,0:22:57.18:0,57,717	1/1:1,21:22:63.14:641,63,0	1/1:3,13:16:33.07:337,33,0	0/0:8,0:8:21.07:0,21,264	1/1:1,12:13:33.07:336,33,0	1/1:0,13:13:39.09:397,39,0	0/0:16,0:16:45.14:0,45,566	1/1:1,10:11:24.05:245,24,0	0/0:18,0:18:48.15:0,48,604	1/1:1,8:9:21.05:214,21,0	1/1:4,15:18:38.35:396,38,0	1/1:2,24:26:30.16:631,30,0	1/1:1,14:15:42.10:429,42,0	1/1:1,17:18:45.10:459,45,0	0/0:16,0:16:45.14:0,45,566	0/0:15,0:15:42.13:0,42,528	1/1:2,27:29:72.16:735,72,0	1/1:1,22:23:66.14:666,66,0	1/1:2,32:34:81.18:826,81,0	1/1:0,10:10:30.07:304,30,0
chr10	33790527	.	C	CAAG	7752.13	PASS	AB=1.000;AC=41;AF=0.732;AN=56;BaseQRankSum=9.356;DP=448;FS=8.735;HRun=0;HaplotypeScore=162.1460;InbreedingCoeff=0.8969;MQ=72.00;MQ0=4;MQRankSum=-10.514;QD=29.70;ReadPosRankSum=0.969;VQSLOD=4.8842;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:17,0:16:39.16:39,0,65	1/1:7,2:9:23.57:287,24,0	0/0:36,0:21:31.01:0,31,396	0/0:36,0:28:15.42:0,15,263	0/0:32,0:32:96.24:0,96,1424	0/0:14,0:14:36.04:0,36,571	0/0:14,0:14:42.14:0,42,676	1/1:12,0:12:28.94:249,29,0	0/0:21,0:21:60.17:0,60,925	1/1:14,1:15:44.49:479,44,0	1/1:15,4:18:44.86:434,45,0	1/1:7,8:15:42.13:599,42,0	1/1:6,3:8:24.06:309,24,0	1/1:12,0:12:32.98:355,33,0	1/1:8,2:10:29.99:353,30,0	1/1:15,6:21:56.94:696,57,0	0/0:34,0:34:90.23:0,90,1366	1/1:6,1:7:18:214,18,0	1/1:15,1:15:35.99:384,36,0	1/1:12,0:12:32.85:375,33,0	1/1:4,0:4:11.96:115,12,0	1/1:13,2:16:44.90:501,45,0	1/1:7,7:14:35.84:505,36,0	1/1:4,2:6:17.91:225,18,0	1/1:9,2:11:26.98:328,27,0	1/1:13,0:13:38.94:438,39,0	1/1:11,2:13:36.08:480,36,0	1/1:9,1:10:29.68:385,30,0
chr10	33790541	.	AGGAAGG	A	1910.86	PASS	AB=0.981;AC=21;AF=0.375;AN=56;BaseQRankSum=3.377;DP=574;FS=3.481;HRun=0;HaplotypeScore=235.7765;InbreedingCoeff=-0.4659;MQ=59.85;MQ0=5;MQRankSum=-5.188;QD=5.29;ReadPosRankSum=-6.804;VQSLOD=0.7082;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:24:99:126,0,195	0/1:10,0:10:33.51:34,0,71	0/0:39,0:24:44.88:0,45,881	0/0:33,0:22:4.11:0,4,443	0/0:27,0:27:81.28:0,81,2974	0/0:14,0:14:39.13:0,39,1322	0/0:17,0:17:47.96:0,48,1756	1/1:12,0:11:18.59:288,19,0	0/0:27,0:27:78.70:0,79,2552	0/1:30,1:31:99:272,0,409	0/1:25,0:24:99:110,0,147	0/0:15,0:15:6.70:0,7,296	0/1:10,0:9:19.49:19,0,163	0/1:13,0:13:56.40:56,0,81	0/1:20,0:20:99:116,0,132	0/1:27,0:27:44.84:45,0,505	0/0:37,0:37:99:0,111,3691	0/1:7,1:8:57.66:58,0,97	0/1:23,0:22:99:120,0,399	0/1:18,0:18:34.12:147,0,34	0/1:10,0:10:15.86:90,0,16	0/1:23,1:23:99:129,0,228	0/1:22,0:22:83.61:84,0,334	0/1:9,1:11:13.06:13,0,90	0/1:19,2:21:99:200,0,273	0/1:22,0:22:71.77:72,0,418	0/1:16,0:16:41.54:42,0,291	0/1:13,0:13:56.94:57,0,122
chr10	33790543	.	GA	G	2313.01	PASS	AB=0.887;AC=39;AF=0.696;AN=56;BaseQRankSum=14.900;DP=572;FS=7.663;HRun=2;HaplotypeScore=191.3224;InbreedingCoeff=0.6315;MQ=57.31;MQ0=5;MQRankSum=-6.086;QD=6.12;ReadPosRankSum=0.087;VQSLOD=0.1504;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:20,5:24:14.04:111,0,14	1/1:6,3:9:15.03:98,15,0	0/0:37,1:20:17.50:0,17,481	0/0:31,2:20:19.47:0,19,274	0/0:27,0:27:81.27:0,81,1212	0/0:15,0:15:42.09:0,42,606	0/0:19,0:19:54.15:0,54,765	1/1:11,1:12:6.63:89,7,0	0/0:25,0:25:72.15:0,72,1074	1/1:22,9:31:12.82:169,13,0	1/1:19,7:25:3.97:123,4,0	1/1:13,2:15:11.77:108,12,0	1/1:7,3:9:7.64:58,8,0	1/1:5,7:12:25.21:151,25,0	1/1:15,5:20:3.63:85,4,0	1/1:21,6:27:14.23:207,14,0	0/0:37,0:37:99:0,111,1651	1/1:5,3:8:13.98:81,14,0	1/1:18,6:23:6.13:99,6,0	1/1:12,7:19:28.85:212,29,0	1/1:8,1:9:3.31:22,3,0	0/1:19,4:23:7.47:145,0,7	1/1:20,3:23:12.86:149,13,0	0/1:11,0:11:0.70:18,0,1	1/1:17,4:21:15.75:124,16,0	1/1:15,6:22:9.50:179,10,0	1/1:9,7:16:2.44:141,2,0	1/1:5,8:13:21.53:134,22,0
chr10	33790544	.	A	AGG	6403.49	PASS	AB=0.889;AC=40;AF=0.714;AN=56;BaseQRankSum=14.677;DP=566;FS=4.912;HRun=2;HaplotypeScore=184.6887;InbreedingCoeff=0.7840;MQ=57.44;MQ0=5;MQRankSum=-8.814;QD=17.12;ReadPosRankSum=-0.209;VQSLOD=2.2090;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:21,2:24:3.25:309,0,3	1/1:6,2:9:13.25:220,13,0	0/0:37,0:20:17.18:0,17,512	0/0:32,0:19:7.60:0,8,261	0/0:27,0:27:81.28:0,81,1316	0/0:14,0:14:42.13:0,42,649	0/0:19,0:19:54.15:0,54,819	1/1:10,1:12:14.57:186,15,0	0/0:25,0:25:72.12:0,72,1132	1/1:29,1:32:31.30:366,31,0	1/1:19,6:25:24.74:335,25,0	1/1:5,10:15:23.85:532,24,0	1/1:5,4:9:12.15:246,12,0	1/1:10,0:11:28.54:283,29,0	1/1:14,3:19:9.52:286,10,0	1/1:19,8:27:26.86:633,27,0	0/0:37,0:37:99:0,111,1749	1/1:6,2:8:16.21:204,16,0	1/1:20,1:21:12.78:227,13,0	1/1:17,0:19:29.72:293,30,0	1/1:9,0:9:3.32:22,3,0	0/1:20,3:22:0.44:269,0,0	1/1:15,8:23:20.22:520,20,0	1/1:8,3:11:2.63:103,3,0	1/1:17,4:21:26.98:341,27,0	1/1:21,0:22:17.19:330,17,0	1/1:13,3:16:10.21:349,10,0	1/1:12,1:13:26.63:350,27,0
chr10	33790546	.	GGA	G	242.09	PASS	AB=0.966;AC=16;AF=0.286;AN=56;BaseQRankSum=7.442;DP=562;FS=7.390;HRun=0;HaplotypeScore=203.6088;InbreedingCoeff=-0.2126;MQ=58.52;MQ0=5;MQRankSum=-3.344;QD=0.87;ReadPosRankSum=-6.083;VQSLOD=0.0424;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:23,1:23:10.72:11,0,121	0/1:9,0:9:19.43:22,0,19	0/0:39,0:20:31.66:0,32,546	0/1:30,0:19:4.58:5,0,393	0/0:27,0:27:81.28:0,81,1477	0/0:15,0:15:45.15:0,45,795	0/0:19,0:19:54.19:0,54,989	1/1:12,1:12:16.90:71,17,0	0/0:25,0:25:69.10:0,69,1265	0/1:31,1:32:39.03:39,0,288	0/1:26,0:25:15.84:16,0,149	0/0:15,0:15:6.87:0,7,244	0/0:10,0:9:14.50:0,15,113	0/1:9,1:10:7.58:8,0,32	0/1:18,1:19:4.72:5,0,121	0/0:27,0:27:0:0,0,295	0/0:37,0:37:99:0,105,1917	0/1:8,0:8:4.47:4,0,72	0/1:22,1:22:24.18:24,0,268	0/1:18,1:19:17.64:71,0,18	0/1:8,1:9:9.51:15,0,10	0/0:21,1:21:25.92:0,26,194	0/0:22,0:22:21.14:0,21,263	0/0:11,0:11:12.81:0,13,79	0/1:21,0:21:39.10:39,0,167	0/1:21,0:21:36.70:37,0,235	0/0:14,1:15:2.86:0,3,203	0/1:12,1:13:29.68:30,0,57
chr10	33790547	.	G	GAGGAGGAGGA	17063.75	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=12.950;DP=567;FS=3.910;HRun=0;HaplotypeScore=226.6838;InbreedingCoeff=0.9868;MQ=58.40;MQ0=5;MQRankSum=-10.458;QD=45.26;ReadPosRankSum=-2.095;VQSLOD=4.2810;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:23,1:24:46.82:957,47,0	1/1:7,2:9:17.72:509,18,0	0/0:36,0:20:34.61:0,35,612	0/0:30,0:18:18.57:0,19,488	0/0:27,0:27:81.28:0,81,2558	0/0:15,0:15:45.14:0,45,1238	0/0:19,0:19:53.98:0,54,1658	1/1:13,0:12:29.41:379,29,0	0/0:25,0:25:69.24:0,69,2094	1/1:31,1:33:69.63:1322,70,0	1/1:21,4:26:36.79:1046,37,0	1/1:7,0:15:27.25:1372,27,0	1/1:7,3:9:22.43:677,22,0	1/1:10,1:11:24.08:747,24,0	1/1:17,0:19:23.63:677,24,0	1/1:20,6:27:44.58:1527,45,0	0/0:36,0:36:99:0,105,3032	1/1:7,2:9:25.26:527,25,0	1/1:22,1:22:49.30:924,49,0	1/1:19,0:19:43.97:539,44,0	1/1:9,0:9:14.94:147,15,0	1/1:19,3:22:31.86:803,32,0	1/1:15,0:22:48.13:1110,48,0	1/1:10,0:12:14.46:312,14,0	1/1:19,2:21:46.80:1010,47,0	1/1:19,0:21:38.89:756,39,0	1/1:14,2:16:16.61:767,17,0	1/1:12,1:13:33.52:957,34,0
chr10	33790548	.	A	AG	1900.82	PASS	AB=0.806;AC=20;AF=0.357;AN=56;BaseQRankSum=15.893;DP=566;FS=1.159;HRun=2;HaplotypeScore=189.9055;InbreedingCoeff=-0.4560;MQ=57.56;MQ0=4;MQRankSum=-10.625;QD=5.19;ReadPosRankSum=0.547;VQSLOD=0.4102;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:21,4:24:99:107,0,102	0/1:7,2:9:5.95:96,0,6	0/0:37,0:20:32.23:0,32,402	0/0:29,0:17:22.80:0,23,318	0/0:27,0:27:81.26:0,81,1051	0/0:17,0:17:45.15:0,45,580	0/0:19,0:19:54.17:0,54,701	0/1:14,0:13:28.91:42,0,29	0/0:26,0:26:68.74:0,69,895	0/1:24,8:32:99:145,0,177	0/1:23,5:27:85.45:134,0,85	0/1:12,3:15:11.70:126,0,12	0/1:6,4:9:9.69:66,0,10	0/1:6,5:11:5.32:84,0,5	0/1:15,4:19:37.12:85,0,37	0/1:19,7:26:60.53:170,0,61	0/0:36,0:36:99:0,105,1362	0/1:6,3:9:4.82:85,0,5	0/1:18,5:22:95.60:96,0,132	0/1:13,5:18:32.56:132,0,33	0/0:9,0:9:12.90:0,13,71	0/1:19,3:21:55.35:55,0,105	0/1:18,4:22:52.87:150,0,53	0/1:11,1:12:11.51:32,0,12	0/1:15,6:21:49.50:50,0,75	0/1:15,6:21:99:156,0,134	0/1:10,6:16:83.30:111,0,83	0/1:6,7:13:13.91:139,0,14
chr10	33790553	.	AAG	A	3055.16	PASS	AB=0.801;AC=19;AF=0.339;AN=56;BaseQRankSum=11.457;DP=559;FS=3.088;HRun=0;HaplotypeScore=188.6163;InbreedingCoeff=-0.5145;MQ=56.22;MQ0=3;MQRankSum=-10.971;QD=8.51;ReadPosRankSum=-2.634;VQSLOD=3.2135;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:19,5:23:99:206,0,548	0/1:6,2:8:99:131,0,140	0/0:35,0:21:40.09:0,40,731	0/1:26,0:15:8.27:8,0,418	0/0:27,0:27:81.28:0,81,1603	0/0:18,0:18:54.19:0,54,1093	0/0:19,0:19:54.19:0,54,1093	0/0:15,2:16:30.82:0,31,660	0/0:27,0:27:78.13:0,78,1550	0/1:23,9:32:99:351,0,1015	0/1:19,6:25:99:266,0,760	0/1:11,2:13:99:112,0,320	0/1:6,3:8:99:111,0,221	0/1:6,6:12:99:248,0,222	0/1:16,4:20:97.49:97,0,484	0/1:19,4:23:99:180,0,649	0/0:34,0:34:99:0,102,2012	0/1:6,2:8:28.01:28,0,338	0/1:20,4:23:99:128,0,812	0/1:11,6:17:99:147,0,557	0/0:8,1:9:17.81:0,18,359	0/1:18,5:22:99:182,0,541	0/1:20,3:23:93.77:94,0,760	0/0:14,0:14:7.95:0,8,298	0/1:18,5:23:99:171,0,783	0/1:14,7:21:99:260,0,699	0/1:10,5:15:99:192,0,482	0/1:5,8:13:99:303,0,219
chr10	33790627	.	A	AAGG	16091.88	PASS	AB=1.000;AC=43;AF=0.768;AN=56;BaseQRankSum=11.490;DP=562;FS=0.000;HRun=0;HaplotypeScore=123.7408;InbreedingCoeff=0.9184;MQ=69.71;MQ0=0;MQRankSum=-6.354;QD=40.03;ReadPosRankSum=1.097;VQSLOD=6.0772;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,21:24:51.18:1097,51,0	1/1:0,7:7:21.03:404,21,0	0/0:38,0:26:44.31:0,44,737	0/1:48,0:29:1.64:2,0,516	0/0:28,0:28:84.27:0,84,1436	0/0:27,0:27:75.24:0,75,1292	0/0:13,0:13:39.13:0,39,688	1/1:2,13:16:35.96:509,36,0	0/0:23,0:23:60.11:0,60,958	1/1:2,15:18:51.12:924,51,0	1/1:0,20:20:45.07:914,45,0	1/1:1,12:13:33.11:701,33,0	1/1:1,13:14:33.11:699,33,0	1/1:2,14:16:37.37:838,37,0	1/1:3,18:21:39.07:786,39,0	1/1:2,13:16:29.62:602,30,0	0/0:31,0:31:85.10:0,85,1357	1/1:3,4:7:15.03:280,15,0	1/1:1,14:14:38.29:661,38,0	1/1:3,15:19:47.94:874,48,0	1/1:8,24:32:78.58:1533,79,0	1/1:0,19:20:48.02:934,48,0	1/1:1,10:11:21.07:450,21,0	1/1:0,19:20:39.61:839,40,0	1/1:2,19:23:43.30:869,43,0	1/1:3,18:23:39.07:1159,39,0	1/1:0,14:16:42.14:889,42,0	1/1:0,2:2:6.02:129,6,0
chr10	33790763	.	A	AC	18065.65	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=-1.050;DP=676;FS=1.032;HRun=2;HaplotypeScore=82.1106;InbreedingCoeff=0.9971;MQ=73.42;MQ0=0;MQRankSum=-6.143;QD=37.33;ReadPosRankSum=3.876;VQSLOD=5.4252;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,46:51:99:1640,114,0	1/1:0,13:13:36.12:518,36,0	0/0:24,0:23:57.01:0,57,651	0/0:23,0:23:54.16:0,54,651	0/0:31,0:31:93.25:0,93,1113	0/0:32,0:32:96.22:0,96,1158	0/0:31,0:31:84.26:0,84,1041	1/1:2,27:29:81.21:1084,81,0	0/0:26,0:26:75.23:0,75,919	1/1:1,25:26:78.25:1105,78,0	1/1:0,13:13:36.12:512,36,0	1/1:0,19:19:51.17:734,51,0	1/1:0,20:21:54.18:763,54,0	1/1:1,20:21:54.18:777,54,0	1/1:2,24:26:66.22:943,66,0	1/1:0,18:18:48.16:690,48,0	0/0:25,0:25:72.21:0,72,877	1/1:0,8:8:15.05:216,15,0	1/1:3,24:27:72.16:982,72,0	1/1:1,22:23:66.18:920,66,0	1/1:0,37:37:99:1374,99,0	1/1:1,17:18:48.16:690,48,0	1/1:0,19:19:51.17:733,51,0	1/1:2,23:25:63.21:907,63,0	1/1:0,17:17:48.16:691,48,0	1/1:1,33:35:99:1406,102,0	1/1:2,21:23:57.19:820,57,0	1/1:2,13:15:39.13:561,39,0
chr10	33791795	.	T	TGGTG	33966.62	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=1.253;DP=613;FS=0.000;HRun=0;HaplotypeScore=102.3672;InbreedingCoeff=0.9804;MQ=84.10;MQ0=0;MQRankSum=-7.616;QD=75.65;ReadPosRankSum=4.813;VQSLOD=6.9339;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,21:26:66.23:1911,66,0	1/1:1,7:8:24.08:651,24,0	0/0:20,0:20:54.18:0,54,1065	0/0:28,0:28:81.26:0,81,1540	0/0:21,0:21:63.21:0,63,1285	0/0:22,0:22:66.20:0,66,1310	0/0:23,0:23:66.18:0,66,1328	1/1:1,21:25:75.23:2006,75,0	0/0:30,0:30:90.31:0,90,1858	1/1:4,27:32:93.31:2573,93,0	1/1:4,25:33:75.26:2156,75,0	1/1:3,11:14:42.14:1170,42,0	1/1:2,18:21:60.21:1721,60,0	1/1:1,18:21:60.21:1717,60,0	1/1:2,21:23:66.23:1898,66,0	1/1:2,14:16:39.13:1130,39,0	0/0:20,0:20:60.21:0,60,1228	1/1:0,9:12:24.08:695,24,0	1/1:3,15:18:54.19:1562,54,0	1/1:0,19:20:57.20:1649,57,0	1/1:0,19:19:45.15:1303,45,0	1/1:3,23:28:63.22:1822,63,0	1/1:1,22:25:66.23:1907,66,0	1/1:3,17:21:48.16:1390,48,0	1/1:5,20:25:66.23:1877,66,0	1/1:1,26:28:84.27:2358,84,0	1/1:3,26:30:81.28:2298,81,0	1/1:0,2:4:6.02:174,6,0
chr10	33791980	.	TA	T	9635.96	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=9.246;DP=495;FS=0.834;HRun=7;HaplotypeScore=52.9363;InbreedingCoeff=0.9902;MQ=80.54;MQ0=0;MQRankSum=-1.066;QD=26.55;ReadPosRankSum=2.630;VQSLOD=5.4951;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,22:23:63.14:643,63,0	1/1:0,6:6:18.04:184,18,0	0/0:22,0:21:36.41:0,36,470	0/0:10,0:10:24.05:0,24,274	0/0:24,0:24:66.19:0,66,805	0/0:22,0:22:60.17:0,60,732	0/0:18,0:18:42.12:0,42,514	1/1:3,28:31:84.16:844,84,0	0/0:18,0:18:45.14:0,45,565	1/1:0,17:17:51.09:511,51,0	1/1:1,19:20:57.13:580,57,0	1/1:0,16:16:42.09:428,42,0	1/1:0,19:19:45.10:459,45,0	1/1:1,13:14:39.09:398,39,0	1/1:0,16:16:45.10:459,45,0	1/1:0,12:12:33.08:337,33,0	0/0:18,0:18:54.17:0,54,678	1/1:0,4:4:12.03:122,12,0	1/1:2,15:17:42.09:428,42,0	1/1:4,21:25:60.13:612,60,0	1/1:0,6:6:18.04:184,18,0	1/1:4,17:21:51.11:520,51,0	1/1:2,17:19:54.08:540,54,0	1/1:2,18:20:48.11:490,48,0	1/1:0,24:24:60.14:612,60,0	1/1:3,15:18:45.10:459,45,0	1/1:3,24:27:60.14:612,60,0	1/1:0,8:8:20.84:214,21,0
chr10	33792315	.	TCTC	T	4563.66	PASS	AB=1.000;AC=27;AF=0.482;AN=56;BaseQRankSum=12.425;DP=621;FS=8.239;HRun=0;HaplotypeScore=126.8922;InbreedingCoeff=0.0647;MQ=60.50;MQ0=8;MQRankSum=0.339;QD=10.81;ReadPosRankSum=5.248;VQSLOD=3.7719;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:56.25:0,56,728	1/1:12,1:13:6.88:158,7,0	0/0:18,0:8:1.14:0,1,134	0/0:35,0:20:14.85:0,15,459	0/0:20,0:20:36:0,36,665	0/0:30,0:30:84.24:0,84,1565	0/0:17,0:17:30.09:0,30,545	0/1:25,0:24:60.32:60,0,128	0/0:20,0:20:48.13:0,48,879	0/1:22,0:21:43.92:161,0,44	0/1:17,0:17:19.26:178,0,19	1/1:2,15:17:27.09:390,27,0	0/1:19,0:19:45.17:119,0,45	1/1:21,0:21:14.61:256,15,0	1/1:17,0:17:38.51:255,39,0	1/1:16,0:16:29.65:202,30,0	0/0:23,0:23:63.15:0,63,1236	0/1:18,0:18:36.28:145,0,36	0/1:16,0:15:62.78:63,0,78	0/1:33,0:33:1.51:312,0,2	0/1:32,0:32:13.52:218,0,14	0/1:26,0:26:98.30:145,0,98	1/1:3,18:20:38.93:564,39,0	1/1:5,24:29:45.08:625,45,0	0/1:18,0:18:42.61:146,0,43	0/1:16,0:14:22.42:143,0,22	0/1:29,0:28:9.40:301,0,9	0/1:17,0:16:25.14:122,0,25
chr10	33792333	.	CCTT	C	9006.79	PASS	AB=1.000;AC=40;AF=0.714;AN=56;BaseQRankSum=10.720;DP=608;FS=13.055;HRun=0;HaplotypeScore=119.1114;InbreedingCoeff=0.8470;MQ=62.80;MQ0=7;MQRankSum=0.763;QD=21.09;ReadPosRankSum=6.238;VQSLOD=3.7195;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:32:54.07:0,54,644	1/1:1,10:11:21:291,21,0	0/1:17,0:12:3.82:4,0,173	0/0:33,0:24:35.53:0,36,670	0/0:18,0:18:49.31:0,49,806	0/0:34,0:34:93.27:0,93,1726	0/0:17,0:17:48.08:0,48,739	1/1:8,10:17:26.99:275,27,0	0/0:20,0:20:57.14:0,57,999	1/1:3,19:21:51.03:638,51,0	1/1:1,16:17:30.10:454,30,0	1/1:15,0:15:26.16:155,26,0	1/1:3,17:20:21.07:318,21,0	1/1:2,19:21:39.60:584,40,0	1/1:0,17:17:39.11:592,39,0	1/1:1,16:17:30.10:448,30,0	0/0:26,0:26:77.87:0,78,1358	1/1:4,16:20:27.09:409,27,0	1/1:5,14:18:37.82:403,38,0	1/1:1,30:31:71.96:936,72,0	1/1:4,23:27:33.41:626,33,0	1/1:4,20:24:30.10:455,30,0	1/1:21,0:19:14.66:193,15,0	0/1:28,0:28:23.95:201,0,24	1/1:3,14:17:27.09:409,27,0	1/1:4,15:17:42.01:521,42,0	1/1:4,25:28:51.17:773,51,0	1/1:3,13:15:21.07:319,21,0
chr10	33793706	.	A	AATCT	6616.85	PASS	AB=1.000;AC=41;AF=0.732;AN=56;BaseQRankSum=-0.715;DP=259;FS=18.859;HRun=0;HaplotypeScore=45.6032;InbreedingCoeff=0.7363;MQ=71.85;MQ0=5;MQRankSum=-2.137;QD=35.20;ReadPosRankSum=-0.394;VQSLOD=2.8145;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:24:24.41:862,24,0	1/1:6,0:6:12.72:118,13,0	0/0:10,0:6:12.02:0,12,181	0/0:6,0:5:6.50:0,6,51	0/0:13,0:13:33.11:0,33,554	0/0:7,0:7:21.06:0,21,337	0/0:5,0:5:15.05:0,15,252	1/1:31,0:23:57.19:977,57,0	0/0:5,0:5:15.05:0,15,255	1/1:8,0:8:23.82:420,24,0	1/1:13,0:13:36.21:534,36,0	1/1:0,3:3:3.01:80,3,0	1/1:7,0:7:17.19:201,17,0	1/1:0,3:4:3.01:79,3,0	1/1:4,0:3:9.02:126,9,0	0/1:6,0:6:34.29:191,0,34	0/0:25,0:25:69.20:0,69,1128	1/1:10,0:10:19.78:340,20,0	1/1:10,0:8:22.14:306,22,0	1/1:8,0:8:24.08:400,24,0	1/1:1,0:1:3.01:50,3,0	1/1:4,0:4:12.03:175,12,0	1/1:2,0:2:6.02:100,6,0	1/1:3,0:3:6.02:100,6,0	1/1:16,0:16:42.64:571,43,0	1/1:7,0:7:17.13:242,17,0	1/1:13,0:13:34.75:480,35,0	1/1:8,0:8:11.64:265,12,0
chr10	33798474	.	T	TCA	15783.05	PASS	AB=0.543;AC=35;AF=0.625;AN=56;BaseQRankSum=16.785;DP=590;FS=0.324;HRun=0;HaplotypeScore=156.9463;InbreedingCoeff=0.9218;MQ=82.40;MQ0=0;MQRankSum=-10.286;QD=44.21;ReadPosRankSum=3.942;VQSLOD=5.6216;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,25:28:63.21:1104,63,0	1/1:0,13:13:36.12:648,36,0	0/0:20,0:21:60.20:0,60,880	0/0:18,0:18:43.03:0,43,618	0/0:19,0:19:57.19:0,57,870	0/0:25,0:25:75.25:0,75,1149	0/0:24,0:24:69.20:0,69,1014	1/1:7,10:17:48.13:794,48,0	0/0:29,0:29:87.28:0,87,1311	1/1:1,21:22:63.15:1053,63,0	1/1:2,31:33:87.29:1517,87,0	0/0:20,0:20:60.18:0,60,876	1/1:3,22:25:66.22:1132,66,0	1/1:5,18:23:57.19:974,57,0	1/1:3,25:29:81.28:1433,81,0	0/1:3,16:19:40.66:765,0,41	0/0:19,0:19:57.18:0,57,851	1/1:0,12:12:30.10:494,30,0	1/1:3,5:8:21.07:366,21,0	1/1:2,25:28:62.94:1139,63,0	1/1:7,12:19:36.12:620,36,0	1/1:1,12:14:27.09:467,27,0	0/0:25,0:25:69.17:0,69,989	0/0:33,0:33:93.30:0,93,1400	1/1:0,12:12:36.12:650,36,0	1/1:0,19:20:60.19:1042,60,0	1/1:4,23:27:72.14:1260,72,0	1/1:1,6:7:18.06:325,18,0
chr10	33799015	.	A	ACAG	22218.09	PASS	AB=0.750;AC=41;AF=0.732;AN=56;BaseQRankSum=-2.749;DP=632;FS=3.846;HRun=0;HaplotypeScore=153.3262;InbreedingCoeff=0.9074;MQ=72.10;MQ0=2;MQRankSum=-4.563;QD=48.83;ReadPosRankSum=3.310;VQSLOD=6.9471;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,20:26:57.20:1232,57,0	1/1:3,5:8:18.03:346,18,0	0/0:30,0:23:48.13:0,48,771	0/0:25,0:19:28.82:0,29,463	0/0:35,0:35:93.23:0,93,1397	0/0:23,0:23:60.20:0,60,938	0/0:19,0:19:48.16:0,48,739	1/1:8,17:25:60.21:1275,60,0	0/0:26,0:26:54.18:0,54,827	1/1:3,25:28:78.25:1600,78,0	1/1:1,14:15:36.12:776,36,0	1/1:2,16:18:42.14:908,42,0	1/1:7,21:28:69.24:1488,69,0	1/1:6,18:24:51.18:1096,51,0	1/1:5,17:22:48.16:1007,48,0	1/1:3,18:21:51.18:1102,51,0	0/0:19,0:19:39.13:0,39,610	0/1:2,1:3:12:59,0,12	1/1:8,15:23:48.16:968,48,0	1/1:7,22:29:66.23:1395,66,0	1/1:2,16:18:36.12:728,36,0	1/1:6,16:22:45.15:912,45,0	1/1:8,23:31:62.50:1282,62,0	1/1:2,22:24:63.22:1321,63,0	1/1:4,24:28:65.91:1369,66,0	1/1:5,22:27:69.19:1410,69,0	1/1:4,26:29:78.27:1685,78,0	1/1:1,4:5:12.04:259,12,0
chr10	33799029	.	GTGTTTGTTTGTT	G	9711.60	PASS	AB=0.704;AC=36;AF=0.667;AN=54;BaseQRankSum=5.429;DP=531;FS=1.875;HRun=0;HaplotypeScore=265.1724;InbreedingCoeff=0.6276;MQ=61.94;MQ0=4;MQRankSum=-2.736;QD=26.83;ReadPosRankSum=4.617;VQSLOD=3.7604;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:24:36.10:0,36,891	1/1:3,5:8:18.05:471,18,0	0/0:33,0:23:22.63:0,23,917	0/0:25,0:15:12.04:0,12,571	0/0:11,0:28:19.43:0,19,385	0/1:9,0:21:7.52:8,0,50	0/0:10,0:17:2.35:0,2,136	1/1:20,0:20:13.12:100,13,0	1/1:8,0:21:12.44:30,12,0	1/1:17,6:24:38.94:831,39,0	1/1:7,4:12:17.96:407,18,0	0/1:8,0:14:4.18:4,0,89	1/1:11,12:23:42.08:1235,42,0	1/1:11,5:17:29.92:575,30,0	0/1:8,0:14:1.89:2,0,119	1/1:11,7:18:35.93:782,36,0	0/0:10,0:16:0.19:0,0,59	./.	1/1:13,3:16:17.97:377,18,0	1/1:10,13:23:48.11:1346,48,0	1/1:14,2:16:7.28:169,7,0	1/1:8,6:14:21.03:527,21,0	0/0:12,0:23:9.91:0,10,251	0/1:18,0:25:8.53:9,0,65	1/1:13,8:22:42:1006,42,0	1/1:17,6:24:32.97:814,33,0	1/1:19,7:25:30.01:788,30,0	1/1:2,2:4:9.01:232,9,0
chr10	33800468	.	GACTGTCAA	G	20263.63	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=14.018;DP=561;FS=4.528;HRun=0;HaplotypeScore=165.6965;InbreedingCoeff=0.9810;MQ=72.68;MQ0=0;MQRankSum=-15.490;QD=61.22;ReadPosRankSum=3.393;VQSLOD=4.8156;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,117,4202	1/1:2,10:12:21.07:603,21,0	0/0:15,0:15:41.61:0,42,1456	0/0:14,0:14:39.60:0,40,1327	0/0:22,0:22:66.19:0,66,2806	0/0:14,0:14:42.14:0,42,1809	0/0:35,0:35:99:0,102,4303	1/1:3,13:16:39.10:910,39,0	0/0:35,0:35:99:0,102,4277	1/1:0,19:19:54.18:1391,54,0	1/1:1,21:22:42.14:1204,42,0	1/1:2,20:22:48.16:1362,48,0	1/1:1,18:19:42.14:1192,42,0	1/1:0,17:17:36.12:1032,36,0	0/0:24,0:24:69.22:0,69,2889	1/1:0,16:16:36.12:1008,36,0	0/0:27,0:27:81.26:0,81,3365	1/1:0,4:4:9.03:252,9,0	1/1:1,15:16:45.15:1263,45,0	1/1:1,28:29:69.24:1915,69,0	1/1:2,20:22:33.11:924,33,0	1/1:1,20:21:51.13:1396,51,0	1/1:1,13:14:33.11:946,33,0	1/1:4,16:20:29.69:850,30,0	1/1:0,20:20:45.11:1177,45,0	1/1:2,19:21:57.20:1635,57,0	1/1:1,17:18:33.11:944,33,0	1/1:0,3:3:9.03:258,9,0
chr10	33800497	.	GGAGCCTACCAA	G	2035.17	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=1.735;DP=565;FS=4.198;HRun=0;HaplotypeScore=251.1727;InbreedingCoeff=0.9639;MQ=73.12;MQ0=0;MQRankSum=-5.408;QD=52.18;ReadPosRankSum=0.068;VQSLOD=2.9139;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,26:39:63.22:2130,63,0	0/0:9,0:9:24.08:0,24,1237	0/0:16,0:16:42.12:0,42,2211	0/0:13,0:13:39.08:0,39,2011	0/0:25,0:25:75.26:0,75,3907	0/0:19,0:19:54.19:0,54,3038	0/0:33,0:33:96.31:0,96,5052	0/0:25,0:25:72.25:0,72,3799	0/0:30,0:30:87.28:0,87,4634	0/0:16,0:16:48.16:0,48,2671	0/0:22,0:22:51.18:0,51,2730	0/0:17,0:17:45.15:0,45,2286	0/0:17,0:17:45.15:0,45,2419	0/0:19,0:19:54.14:0,54,2544	0/0:23,0:23:66.23:0,66,3743	0/0:22,0:22:57.15:0,57,3104	0/0:22,0:22:66.23:0,66,3718	0/0:7,0:7:21.07:0,21,1202	0/0:25,0:25:75.26:0,75,3857	0/0:31,0:31:75.26:0,75,3952	0/0:25,0:25:48.12:0,48,2266	0/0:17,0:17:45.15:0,45,2249	0/0:16,0:16:39.13:0,39,2062	0/0:20,0:20:29.77:0,30,1582	0/0:21,0:21:51.18:0,51,2914	0/0:14,0:14:39.13:0,39,2035	0/0:17,0:17:45.15:0,45,2481	0/0:5,0:5:12.04:0,12,670
chr10	33801413	.	CAT	C	17949.47	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=14.997;DP=790;FS=9.921;HRun=0;HaplotypeScore=135.0807;InbreedingCoeff=0.9954;MQ=69.51;MQ0=3;MQRankSum=-1.388;QD=34.32;ReadPosRankSum=2.870;VQSLOD=6.8762;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:83.05:0,83,1623	1/1:1,15:16:39.13:558,39,0	0/0:20,0:15:23.59:0,24,300	0/0:26,0:21:23.26:0,23,414	0/0:40,0:40:99:0,117,2022	0/0:25,0:25:72.21:0,72,1214	0/0:28,0:28:75.20:0,75,1253	1/1:1,37:38:99:1489,111,0	0/0:37,0:37:99:0,108,1915	1/1:1,38:39:99:1572,111,0	1/1:2,29:31:69.23:988,69,0	1/1:1,23:24:60.20:859,60,0	1/1:1,31:32:69.23:988,69,0	1/1:1,23:24:60.20:859,60,0	0/0:18,0:18:54.15:0,54,929	1/1:0,28:28:72.24:1031,72,0	0/0:35,0:35:96.22:0,96,1588	1/1:4,14:17:13.34:540,13,0	1/1:2,16:18:48.11:630,48,0	1/1:2,33:35:90.30:1289,90,0	1/1:2,38:40:81.27:1160,81,0	1/1:1,26:27:69.23:983,69,0	1/1:1,23:24:53.85:767,54,0	1/1:2,28:30:57.19:816,57,0	1/1:0,28:27:66.14:919,66,0	1/1:2,29:31:35.17:1126,35,0	1/1:0,28:28:69.23:987,69,0	1/1:0,12:12:27.09:386,27,0
chr10	33802024	.	CA	C	1555.45	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.464;DP=607;FS=0.000;HRun=1;HaplotypeScore=59.9692;InbreedingCoeff=0.9986;MQ=88.08;MQ0=1;MQRankSum=-5.316;QD=31.11;ReadPosRankSum=1.442;VQSLOD=3.2910;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,26:26:57.19:796,57,0	0/0:13,0:13:39.12:0,39,600	0/0:32,0:32:93.32:0,93,1485	0/0:18,0:18:51.13:0,51,756	0/0:24,0:24:72.25:0,72,1146	0/0:28,0:28:81.26:0,81,1271	0/0:16,0:16:48.15:0,48,744	0/0:26,0:26:78.27:0,78,1246	0/0:22,0:22:66.21:0,66,1027	0/0:28,0:28:84.27:0,84,1301	0/0:25,0:25:75.24:0,75,1174	0/0:17,0:17:51.16:0,51,792	0/0:21,0:21:63.19:0,63,961	0/0:22,0:22:66.18:0,66,984	1/1:0,24:24:63.21:881,63,0	0/0:20,0:20:60.19:0,60,926	0/0:22,0:22:66.20:0,66,1023	0/0:13,0:13:39.06:0,39,569	0/0:15,0:15:45.12:0,45,672	0/0:35,0:35:99:0,102,1625	0/0:19,0:19:54.18:0,54,861	0/0:27,0:27:81.26:0,81,1270	0/0:11,0:10:30.10:0,30,477	0/0:8,0:8:24.08:0,24,378	0/0:29,0:29:87.28:0,87,1366	0/0:20,0:20:60.20:0,60,939	0/0:30,0:29:87.25:0,87,1366	0/0:16,0:16:48.16:0,48,764
chr10	33802497	.	T	TA	322.08	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-3.966;DP=547;FS=1.019;HRun=8;HaplotypeScore=130.6993;InbreedingCoeff=0.9042;MQ=73.95;MQ0=3;MQRankSum=-0.469;QD=21.47;ReadPosRankSum=1.124;VQSLOD=2.2177;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,102,908	0/0:4,0:4:8.79:0,9,64	0/0:37,0:22:34.79:0,35,270	0/0:26,0:16:14.44:0,14,140	0/0:14,0:14:27.48:0,27,248	0/0:32,0:32:87.02:0,87,790	0/0:10,0:10:30.02:0,30,273	0/0:30,0:30:72.02:0,72,655	0/0:23,0:23:56.61:0,57,500	0/0:17,0:17:39.02:0,39,355	0/0:23,0:23:65.77:0,66,584	0/0:16,0:16:33.01:0,33,302	0/0:8,0:8:21.01:0,21,192	0/0:22,0:23:59.53:0,60,528	1/1:2,13:15:36.11:417,36,0	0/0:15,0:15:42.02:0,42,384	0/0:24,0:24:72.04:0,72,658	0/0:21,0:21:48.02:0,48,439	0/0:24,0:24:59.62:0,60,529	0/0:19,0:19:42.02:0,42,383	0/0:10,0:10:23.59:0,24,198	0/0:17,0:17:42.02:0,42,384	0/0:20,0:20:60.03:0,60,549	0/0:9,0:9:26.99:0,27,238	0/0:20,0:20:47.76:0,48,423	0/0:21,0:21:60.02:0,60,544	0/0:24,0:24:62.75:0,63,555	0/0:7,0:8:14.72:0,15,137
chr10	33802952	.	T	TA	436.14	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-5.249;DP=350;FS=0.000;HRun=9;HaplotypeScore=112.3228;InbreedingCoeff=0.7705;MQ=63.68;MQ0=0;MQRankSum=1.016;QD=24.23;ReadPosRankSum=0.408;VQSLOD=2.9035;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:26.94:0,27,228	0/0:1,0:1:3:0,3,26	0/0:13,0:9:14.97:0,15,125	0/0:11,0:11:18.90:0,19,137	0/0:19,0:19:50.95:0,51,438	0/0:10,0:10:17.97:0,18,156	0/0:16,0:16:38.99:0,39,338	0/0:29,0:29:77.91:0,78,677	0/0:13,0:13:29.97:0,30,260	0/0:21,0:21:62.99:0,63,547	0/0:10,0:10:23.93:0,24,201	0/0:8,0:8:23.96:0,24,202	0/0:9,0:9:23.97:0,24,208	0/0:5,0:5:12:0,12,104	1/1:2,16:18:48.13:531,48,0	0/0:13,0:13:32.97:0,33,286	0/0:8,0:8:20.94:0,21,175	0/0:8,0:8:17.97:0,18,156	0/0:11,0:11:29.93:0,30,253	0/0:13,0:13:32.96:0,33,282	0/0:8,0:8:21:0,21,182	0/0:17,0:17:44.95:0,45,390	0/0:11,0:11:32.98:0,33,283	0/0:14,0:14:32.98:0,33,284	0/0:13,0:13:35.99:0,36,312	0/0:18,0:18:44.91:0,45,383	0/0:16,0:16:35.98:0,36,312	0/0:4,0:4:12:0,12,104
chr10	33802985	.	CGTGTGTGTGTGTGTGTGTGT	C	7975.69	PASS	AB=0.755;AC=32;AF=0.571;AN=56;BaseQRankSum=5.143;DP=368;FS=0.914;HRun=0;HaplotypeScore=211.2131;InbreedingCoeff=0.7103;MQ=52.70;MQ0=21;MQRankSum=-4.644;QD=40.08;ReadPosRankSum=1.927;VQSLOD=4.1889;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:16:24.08:0,24,1148	1/1:1,2:3:3.01:160,3,0	0/0:28,0:10:12.04:0,12,310	0/0:22,0:7:12.04:0,12,301	0/0:13,0:15:30.10:0,30,1182	0/0:8,0:14:18.06:0,18,694	0/0:12,0:14:15.05:0,15,473	1/1:19,7:25:21.05:323,21,0	0/0:6,0:10:15.05:0,15,479	1/1:14,5:19:12.04:642,12,0	1/1:5,4:9:12.04:642,12,0	0/0:6,0:8:18.06:0,18,992	1/1:7,3:9:9.03:481,9,0	1/1:1,4:5:9.03:481,9,0	0/0:12,0:15:24.05:0,24,547	1/1:8,5:12:15.05:802,15,0	0/0:6,0:9:12:0,12,363	1/1:5,1:6:3.01:160,3,0	1/1:4,4:8:9.02:481,9,0	1/1:7,4:12:15.05:657,15,0	1/1:10,0:10:3.01:160,3,0	0/1:9,5:14:12.83:469,0,13	0/1:12,1:17:99:124,0,1770	0/0:12,0:15:18.06:0,18,1159	1/1:6,5:10:12.04:642,12,0	1/1:14,4:18:12.04:527,12,0	1/1:5,8:13:15.05:802,15,0	1/1:2,2:4:9.03:420,9,0
chr10	33804132	.	TC	T	488.70	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.597;DP=639;FS=13.887;HRun=2;HaplotypeScore=114.1709;InbreedingCoeff=0.9701;MQ=67.95;MQ0=0;MQRankSum=-0.111;QD=25.72;ReadPosRankSum=0.791;VQSLOD=2.2358;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,144,2065	0/0:13,0:13:39.13:0,39,584	0/0:15,0:15:38.23:0,38,572	0/0:17,0:16:45.03:0,45,577	0/0:22,0:22:50.93:0,51,710	0/0:20,0:20:51.13:0,51,704	0/0:19,0:19:54.16:0,54,769	0/0:28,0:28:81.22:0,81,1159	0/0:22,0:22:66.18:0,66,927	0/0:24,0:24:69.22:0,69,1001	0/0:23,0:23:66.17:0,66,948	0/0:25,0:25:72.24:0,72,1077	0/0:22,0:22:66.16:0,66,892	0/0:25,0:25:72.24:0,72,1072	1/1:2,17:19:45.15:584,45,0	0/0:17,0:17:51.16:0,51,744	0/0:27,0:27:81.23:0,81,1153	0/0:27,0:27:78.23:0,78,1145	0/0:26,0:26:78.22:0,78,1108	0/0:21,0:21:57.18:0,57,831	0/0:31,0:31:93.29:0,93,1353	0/0:26,0:26:75.21:0,75,1048	0/0:16,0:16:39.12:0,39,564	0/0:36,0:36:99:0,105,1573	0/0:21,0:21:63.20:0,63,923	0/0:24,0:24:72.17:0,72,1030	0/0:17,0:17:48.16:0,48,718	0/0:4,0:4:12.04:0,12,180
chr10	33804326	.	G	GTTGGTTTGGT	30335.22	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=3.829;DP=842;FS=0.689;HRun=0;HaplotypeScore=421.8694;InbreedingCoeff=0.9827;MQ=68.23;MQ0=4;MQRankSum=-8.646;QD=40.50;ReadPosRankSum=4.377;VQSLOD=3.7337;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:42,0:44:54.16:1491,54,0	1/1:13,0:13:24.08:668,24,0	0/0:48,0:40:18.37:0,18,824	0/0:45,0:37:49.50:0,49,941	1/1:36,0:38:66.21:1913,66,0	1/1:35,0:36:75.26:2106,75,0	1/1:28,0:29:51:1208,51,0	1/1:38,0:36:52.01:1150,52,0	1/1:15,1:20:24.08:933,24,0	1/1:36,0:36:45.09:1014,45,0	1/1:23,0:23:39.12:926,39,0	1/1:26,4:33:39.13:1532,39,0	1/1:30,0:31:54.14:1487,54,0	1/1:34,0:34:55.42:1432,55,0	1/1:7,19:27:36.12:1634,36,0	1/1:38,0:39:69.20:2056,69,0	1/1:21,0:21:24.08:716,24,0	1/1:22,0:22:42.88:868,43,0	1/1:25,0:24:36.12:954,36,0	1/1:31,0:31:43.95:1105,44,0	1/1:26,0:26:18.06:337,18,0	1/1:28,0:28:51.15:1170,51,0	1/1:34,0:34:51.16:1254,51,0	1/1:21,0:21:28.34:859,28,0	1/1:17,0:17:31.34:813,31,0	1/1:27,0:27:39.08:855,39,0	1/1:37,0:37:63.18:1488,63,0	1/1:6,0:6:16.87:364,17,0
chr10	33804366	.	TCATG	T	3468.19	PASS	AB=0.847;AC=19;AF=0.339;AN=56;BaseQRankSum=14.350;DP=682;FS=10.357;HRun=0;HaplotypeScore=179.3024;InbreedingCoeff=-0.5138;MQ=72.92;MQ0=4;MQRankSum=-7.283;QD=8.05;ReadPosRankSum=-0.791;VQSLOD=1.7447;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,1:46:61.56:0,62,3017	0/1:11,2:13:89.54:90,0,706	0/0:23,1:22:21.46:0,21,1364	0/0:46,0:43:78.73:0,79,2364	0/1:27,5:32:99:130,0,2125	0/1:21,8:28:99:385,0,1422	0/1:16,3:19:99:125,0,1113	0/0:31,0:31:93.28:0,93,2418	0/0:18,0:18:46.63:0,47,1242	0/1:23,3:26:99:110,0,1790	0/1:21,4:24:99:174,0,1295	0/0:22,0:22:57.19:0,57,1558	0/1:19,4:23:99:174,0,1478	0/1:23,5:28:99:225,0,1705	0/0:24,0:24:69.15:0,69,1799	0/1:25,3:29:99:137,0,1970	0/1:24,4:28:99:147,0,1558	0/1:13,6:18:99:308,0,737	0/0:14,0:14:42.14:0,42,1106	0/1:20,4:24:99:191,0,1194	0/1:15,1:16:32.71:33,0,721	0/1:21,5:26:99:236,0,1580	0/1:15,4:19:99:169,0,1009	0/0:23,0:22:60.68:0,61,1549	0/1:11,4:15:99:201,0,885	0/1:18,6:24:99:301,0,1363	0/1:24,6:29:99:290,0,1726	0/1:5,1:6:44.82:45,0,355
chr10	33804749	.	T	TC	22390.61	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=1.934;DP=604;FS=7.568;HRun=1;HaplotypeScore=174.6418;InbreedingCoeff=0.9882;MQ=73.62;MQ0=0;MQRankSum=-7.591;QD=39.21;ReadPosRankSum=4.625;VQSLOD=3.5735;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,18:20:48.08:668,48,0	1/1:0,8:8:24.08:359,24,0	0/0:19,0:19:39.02:0,39,497	0/0:13,0:11:20.79:0,21,221	1/1:4,24:28:60.20:896,60,0	1/1:0,24:24:69.23:1033,69,0	1/1:3,14:17:42.14:629,42,0	1/1:2,21:23:63.21:928,63,0	1/1:1,14:15:45.11:632,45,0	1/1:3,27:30:81.23:1178,81,0	1/1:3,27:30:75.25:1110,75,0	1/1:2,19:21:60.17:871,60,0	1/1:1,14:15:45.15:672,45,0	1/1:2,12:14:36.12:538,36,0	1/1:5,27:32:81.27:1213,81,0	1/1:0,23:23:66.14:936,66,0	1/1:4,22:26:75.20:1077,75,0	1/1:1,9:10:30.10:446,30,0	1/1:3,10:13:39.13:565,39,0	1/1:4,26:30:78.26:1159,78,0	1/1:1,20:21:54.18:809,54,0	1/1:3,34:37:93.29:1370,93,0	1/1:3,18:21:51.17:752,51,0	1/1:2,14:16:45.14:655,45,0	1/1:4,24:28:75.25:1113,75,0	1/1:2,24:26:75.25:1122,75,0	1/1:4,32:36:99:1434,99,0	1/1:0,5:5:15.05:225,15,0
chr10	33804802	.	CA	C	13359.87	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=0.968;DP=586;FS=10.012;HRun=8;HaplotypeScore=131.6008;InbreedingCoeff=0.9531;MQ=70.14;MQ0=0;MQRankSum=-7.364;QD=23.86;ReadPosRankSum=5.102;VQSLOD=3.4808;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,25:27:60.09:579,60,0	1/1:0,11:11:27.04:261,27,0	0/0:15,0:15:10.09:0,10,373	0/0:11,0:11:20.93:0,21,226	1/1:1,28:29:60.06:574,60,0	1/1:1,27:28:75.12:724,75,0	1/1:0,19:19:51.08:493,51,0	1/1:5,26:31:78.09:746,78,0	1/1:1,11:12:30.05:290,30,0	1/1:3,26:29:75.11:724,75,0	1/1:3,24:27:63.09:608,63,0	1/1:1,12:13:33.05:319,33,0	1/1:3,18:21:51.03:492,51,0	1/1:0,13:13:30.05:290,30,0	1/1:1,17:18:51.08:492,51,0	1/1:1,15:16:45.07:434,45,0	1/1:4,22:26:57.08:550,57,0	1/1:2,9:11:27.04:261,27,0	1/1:6,8:14:33.04:318,33,0	1/1:4,33:37:90.13:869,90,0	1/1:2,10:12:21.02:203,21,0	1/1:3,30:33:87.13:840,87,0	1/1:2,20:22:57.09:550,57,0	1/1:0,12:12:27.04:261,27,0	1/1:2,26:28:69.09:660,69,0	1/1:1,27:28:84.14:811,84,0	1/1:5,32:37:92.72:897,93,0	1/1:2,4:6:12.02:116,12,0
chr10	33805231	.	TTGTCTC	T	1208.11	PASS	AB=0.974;AC=7;AF=0.125;AN=56;BaseQRankSum=-3.000;DP=501;FS=0.000;HRun=0;HaplotypeScore=229.3018;InbreedingCoeff=0.6840;MQ=51.74;MQ0=3;MQRankSum=-1.045;QD=17.02;ReadPosRankSum=0.093;VQSLOD=2.8255;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:10.99:0,11,46	0/0:11,0:11:19.53:0,20,94	0/0:33,0:26:35.72:0,36,1449	0/0:29,0:20:36.13:0,36,1079	0/0:28,0:28:36.85:0,37,191	0/0:20,0:20:25.30:0,25,87	0/0:15,0:15:18.04:0,18,62	0/0:27,0:24:23.82:0,24,136	0/0:13,0:13:7.35:0,7,51	0/0:35,0:35:55.46:0,55,310	0/0:17,0:17:22.05:0,22,70	1/1:0,8:8:18.03:359,18,0	0/0:9,0:9:15.58:0,16,108	0/0:9,0:9:12.58:0,13,48	0/0:20,0:20:48.16:0,48,1081	0/0:14,0:14:19.18:0,19,46	0/0:13,0:14:12.68:0,13,71	0/0:6,0:6:7.67:0,8,59	0/0:11,0:10:13.12:0,13,80	0/1:36,1:37:6.31:6,0,175	0/0:5,0:5:6.21:0,6,22	0/0:22,0:22:42.22:0,42,191	1/1:0,20:20:45.07:936,45,0	1/1:1,5:6:3.01:41,3,0	0/0:22,0:22:31.48:0,31,82	0/0:23,0:23:42.95:0,43,244	0/0:23,0:23:28.69:0,29,119	0/0:11,0:11:12.44:0,12,30
chr10	33805239	.	GTCTC	G	14309.25	PASS	AB=1.000;AC=46;AF=0.821;AN=56;BaseQRankSum=3.677;DP=486;FS=10.410;HRun=0;HaplotypeScore=171.5871;InbreedingCoeff=0.6705;MQ=50.52;MQ0=4;MQRankSum=-4.129;QD=36.88;ReadPosRankSum=3.668;VQSLOD=4.4318;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,7:12:15.05:266,15,0	1/1:3,7:10:21.07:376,21,0	0/0:37,0:27:56.18:0,56,1330	0/0:36,0:25:48.25:0,48,1164	1/1:5,19:24:54.08:877,54,0	1/1:3,15:18:45.14:774,45,0	1/1:2,11:13:27.09:477,27,0	1/1:6,12:15:36.11:608,36,0	1/1:3,10:13:33.11:584,33,0	1/1:8,24:32:67.15:1213,67,0	1/1:1,15:16:36.12:595,36,0	0/1:9,0:9:28.99:90,0,29	1/1:5,6:11:26.94:373,27,0	1/1:2,7:9:21.07:374,21,0	0/0:19,0:19:48:0,48,502	1/1:0,14:14:36.12:642,36,0	1/1:3,11:14:21.03:372,21,0	1/1:1,4:5:9.03:162,9,0	1/1:4,7:10:23.75:325,24,0	1/1:5,32:37:93.29:1600,93,0	1/1:2,3:5:9.03:143,9,0	1/1:7,15:22:60.19:1001,60,0	0/1:23,0:23:21.15:226,0,21	0/0:5,0:5:1.55:0,2,4	1/1:0,19:19:57.20:1003,57,0	1/1:6,17:23:60.18:998,60,0	1/1:2,16:19:45.15:801,45,0	1/1:0,11:11:24.05:431,24,0
chr10	33805249	.	CTG	C	1319.71	PASS	AB=1.000;AC=24;AF=0.429;AN=56;BaseQRankSum=-2.044;DP=491;FS=17.802;HRun=0;HaplotypeScore=224.1958;InbreedingCoeff=0.3409;MQ=49.47;MQ0=4;MQRankSum=-3.035;QD=5.00;ReadPosRankSum=-8.953;VQSLOD=-0.4559;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:10,0:10:0.05:20,0,0	0/0:8,0:8:6.05:0,6,20	0/0:42,0:33:58.58:0,59,1081	0/0:42,0:32:45.41:0,45,874	1/1:26,0:26:13.69:126,14,0	0/1:16,0:16:6.23:6,0,31	1/1:14,0:14:5.14:48,5,0	0/0:20,0:17:17.94:0,18,141	0/1:11,0:11:9.19:36,0,9	0/0:27,0:27:35.17:0,35,189	1/1:17,0:17:3.62:60,4,0	0/0:12,0:12:18.38:0,18,148	0/1:10,0:10:54.10:59,0,54	0/1:12,0:12:14.87:17,0,15	1/1:7,12:19:44.89:520,45,0	0/1:16,0:16:20.30:22,0,20	0/1:15,0:15:27.75:28,0,28	0/0:4,0:4:5.41:0,5,15	0/0:10,0:9:12.99:0,13,108	1/1:35,0:35:38.28:261,38,0	1/1:4,0:4:1.67:12,2,0	1/1:21,0:21:12.02:141,12,0	0/0:24,0:24:29.15:0,29,200	0/0:5,0:5:3:0,3,28	1/1:20,0:20:15.29:128,15,0	0/0:19,0:19:20.03:0,20,68	0/1:18,0:18:15.94:21,0,16	0/0:11,0:11:11.05:0,11,29
chr10	33805278	.	CCTCT	C	10749.81	PASS	AC=48;AF=0.923;AN=52;BaseQRankSum=4.848;DP=480;FS=24.625;HRun=0;HaplotypeScore=218.8726;InbreedingCoeff=0.8029;MQ=61.94;MQ0=3;MQRankSum=-6.988;QD=29.94;ReadPosRankSum=8.573;VQSLOD=3.1874;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:1,11:12:12.25:184,12,0	1/1:1,7:8:14.94:272,15,0	0/0:42,0:27:28.52:0,29,1020	0/0:72,0:48:72.16:0,72,1257	1/1:4,23:27:32.29:596,32,0	1/1:3,18:21:44.94:817,45,0	1/1:4,8:12:14.95:272,15,0	1/1:3,18:18:42.14:731,42,0	1/1:1,9:10:18.06:327,18,0	1/1:4,14:18:45.09:778,45,0	1/1:4,9:13:12.11:268,12,0	1/1:4,7:11:18.06:327,18,0	1/1:2,8:10:11.69:332,12,0	1/1:2,14:16:29.13:478,29,0	1/1:2,15:17:17.63:326,18,0	1/1:4,11:15:29.26:524,29,0	1/1:2,4:6:9.02:164,9,0	1/1:2,2:4:3.01:55,3,0	1/1:2,10:12:30.10:533,30,0	1/1:7,24:31:41.32:724,41,0	./.	1/1:1,15:16:14.16:271,14,0	1/1:4,13:17:26.98:489,27,0	./.	1/1:2,14:16:11.28:217,11,0	1/1:2,25:27:78.27:1417,78,0	1/1:5,6:11:21.07:364,21,0	1/1:2,6:8:18.02:283,18,0
chr10	33805328	.	GACTC	G	496.79	PASS	AB=0.941;AC=27;AF=0.500;AN=54;BaseQRankSum=4.170;DP=471;FS=13.569;HRun=0;HaplotypeScore=183.4241;InbreedingCoeff=0.1750;MQ=57.96;MQ0=24;MQRankSum=-2.392;QD=2.56;ReadPosRankSum=4.939;VQSLOD=1.3909;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:10,1:9:4.98:0,5,24	0/0:5,0:5:2.75:0,3,13	0/0:92,0:29:70.49:0,70,1199	0/0:131,0:54:99:0,100,1922	0/1:13,0:13:0:0,0,0	1/1:15,1:16:4.73:37,5,0	./.	0/1:21,0:21:92.05:130,0,92	1/1:7,2:9:11.78:88,12,0	0/1:13,1:12:76.02:76,0,76	0/1:7,1:9:0.14:0,0,0	0/1:8,0:9:11.99:12,0,14	0/1:10,0:10:10.44:21,0,10	1/1:11,0:13:2.45:44,2,0	1/1:11,0:11:0.22:11,0,0	1/1:10,1:11:3.90:45,4,0	1/1:3,0:3:5.91:37,6,0	0/0:2,0:2:2.98:0,3,22	0/0:10,0:10:8.43:0,8,106	0/1:12,0:12:0.22:0,0,1	0/1:4,1:4:6.73:7,0,32	0/0:16,0:18:0.78:0,1,2	0/1:11,0:10:0:0,0,0	0/1:5,0:5:0:0,0,0	0/0:5,0:6:0:0,0,0	0/1:13,0:14:18.05:18,0,120	1/1:3,1:6:8.98:98,9,0	1/1:0,1:1:2.22:7,2,0
chr10	33805329	.	ACTCTCTCT	A	2514.53	PASS	AB=0.878;AC=26;AF=0.520;AN=50;BaseQRankSum=1.876;DP=462;FS=14.763;HRun=0;HaplotypeScore=186.2082;InbreedingCoeff=0.2594;MQ=58.38;MQ0=24;MQRankSum=-2.873;QD=15.06;ReadPosRankSum=4.663;VQSLOD=1.7144;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:9,1:8:2.62:18,3,0	0/0:4,1:5:0:0,0,1	0/0:90,0:27:62.82:0,63,1455	0/0:127,0:54:99:0,103,2372	0/0:8,5:13:0:0,0,1	0/1:14,1:16:15.69:67,0,16	./.	1/1:4,17:21:37.17:879,37,0	1/1:8,1:9:14.79:244,15,0	1/1:11,3:12:20.54:309,21,0	0/0:7,1:9:0:0,0,1	1/1:8,2:9:2.80:71,3,0	0/1:7,3:10:49.13:93,0,49	1/1:9,3:12:5.64:60,6,0	0/1:9,2:11:9.98:45,0,10	1/1:7,3:10:5.53:53,6,0	1/1:2,1:3:6.02:141,6,0	./.	0/1:9,1:10:0.15:204,0,0	0/0:10,2:12:0.43:0,0,2	1/1:5,0:4:4.86:66,5,0	0/0:16,2:18:0.47:0,0,4	0/0:7,4:10:0:0,0,0	0/1:5,0:5:0:0,0,0	0/0:5,1:6:0:0,0,1	1/1:13,2:14:20.55:342,21,0	0/1:5,0:6:5.48:49,0,5	./.
chr10	33805735	.	A	AC	24139.12	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=6.085;DP=613;FS=10.292;HRun=0;HaplotypeScore=103.5922;InbreedingCoeff=0.9644;MQ=68.18;MQ0=0;MQRankSum=-5.729;QD=43.26;ReadPosRankSum=6.247;VQSLOD=3.7133;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,24:26:62.68:1049,63,0	1/1:0,6:6:18.06:288,18,0	0/0:29,0:26:72.24:0,72,997	0/0:25,1:24:21.41:0,21,840	1/1:3,26:29:69.24:1103,69,0	1/1:0,20:20:57.19:911,57,0	1/1:0,12:12:36.12:576,36,0	1/1:0,23:23:66.22:1046,66,0	1/1:0,22:22:66.23:1055,66,0	1/1:0,33:33:96.29:1503,96,0	1/1:1,22:23:54.18:863,54,0	1/1:1,25:26:69.23:969,69,0	1/1:0,15:15:45.15:719,45,0	1/1:0,26:26:72.25:1151,72,0	1/1:0,26:26:72.25:1151,72,0	1/1:0,26:26:78.27:1247,78,0	1/1:0,22:22:63.21:1006,63,0	1/1:2,17:19:54.18:856,54,0	1/1:0,13:13:39.13:623,39,0	1/1:2,31:32:84.29:1342,84,0	1/1:1,23:24:60.20:959,60,0	1/1:0,24:24:69.24:1103,69,0	1/1:1,23:24:57.15:785,57,0	1/1:0,10:10:27.09:383,27,0	1/1:0,20:20:57.19:911,57,0	1/1:0,20:20:60.20:959,60,0	1/1:1,31:32:90.31:1438,90,0	1/1:0,4:4:9.03:144,9,0
chr10	33806467	.	T	TGAA	28306.36	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=1.442;DP=606;FS=0.617;HRun=0;HaplotypeScore=111.8801;InbreedingCoeff=0.9915;MQ=59.60;MQ0=4;MQRankSum=-1.249;QD=50.91;ReadPosRankSum=6.244;VQSLOD=7.0766;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,25:27:72.25:1557,72,0	1/1:0,10:9:27.09:596,27,0	0/0:24,0:23:66.22:0,66,1034	0/0:26,0:24:53.82:0,54,769	1/1:4,24:27:69.15:1401,69,0	1/1:6,23:28:66.18:1409,66,0	1/1:3,7:11:18.06:397,18,0	1/1:6,12:18:42.13:834,42,0	1/1:6,16:22:51.18:1125,51,0	1/1:4,21:22:63.20:1321,63,0	1/1:3,22:25:66.23:1455,66,0	1/1:3,13:16:33.07:682,33,0	1/1:3,21:24:60.21:1319,60,0	1/1:1,11:12:24.08:529,24,0	1/1:1,15:16:42.14:926,42,0	1/1:4,18:22:51.17:1101,51,0	1/1:2,10:12:30.07:617,30,0	1/1:12,18:32:31.18:1038,31,0	1/1:6,8:14:36.10:750,36,0	1/1:6,31:37:96.20:1927,96,0	1/1:1,15:17:36.12:794,36,0	1/1:2,21:25:63.17:1343,63,0	1/1:5,21:29:66.15:1449,66,0	1/1:0,8:8:24.08:528,24,0	1/1:2,27:28:78.27:1720,78,0	1/1:1,19:20:57.20:1258,57,0	1/1:8,25:34:78.27:1719,78,0	1/1:2,7:9:24.08:511,24,0
chr10	33808715	.	TA	T	10843.04	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=0.237;DP=461;FS=1.437;HRun=8;HaplotypeScore=111.2430;InbreedingCoeff=0.9058;MQ=70.53;MQ0=0;MQRankSum=-4.843;QD=24.20;ReadPosRankSum=2.916;VQSLOD=4.5529;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,27:33:75.11:724,75,0	1/1:1,8:9:18.02:174,18,0	0/0:9,0:9:18.02:0,18,195	0/0:4,0:4:6.02:0,6,72	1/1:1,22:23:63.09:608,63,0	1/1:1,21:22:60.09:579,60,0	1/1:0,11:11:33.05:319,33,0	1/1:4,22:26:66.09:633,66,0	1/1:1,14:15:39.06:377,39,0	1/1:5,24:29:72.11:695,72,0	1/1:1,18:19:48.07:462,48,0	1/1:4,15:19:39.06:377,39,0	1/1:0,9:9:27.04:261,27,0	1/1:0,13:13:36.06:348,36,0	1/1:2,13:15:33.04:317,33,0	1/1:1,11:12:33.05:319,33,0	1/1:4,7:11:21.03:203,21,0	1/1:0,5:5:15.02:145,15,0	1/1:3,17:20:51.07:486,51,0	1/1:1,23:24:60.09:579,60,0	1/1:1,12:13:33.05:319,33,0	1/1:1,11:12:27.04:261,27,0	1/1:2,20:22:50.75:492,51,0	1/1:1,5:6:12.02:116,12,0	1/1:3,35:38:96.15:927,96,0	1/1:1,15:16:45.06:430,45,0	1/1:0,19:19:51.08:492,51,0	1/1:0,7:7:21.03:203,21,0
chr10	33809500	.	TACA	T	3038.22	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=5.639;DP=685;FS=1.011;HRun=0;HaplotypeScore=134.7555;InbreedingCoeff=0.9993;MQ=80.17;MQ0=0;MQRankSum=-2.642;QD=40.51;ReadPosRankSum=1.220;VQSLOD=4.8097;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:66.22:0,66,1424	0/0:15,0:15:45.15:0,45,992	0/0:22,0:22:44.88:0,45,850	0/0:12,0:12:30.08:0,30,561	0/0:22,0:22:63.22:0,63,1389	0/0:23,0:23:66.23:0,66,1451	0/0:22,0:22:66.23:0,66,1458	0/0:37,0:37:99:0,111,2452	0/0:29,0:29:81.28:0,81,1772	0/0:20,0:20:57.19:0,57,1222	0/0:37,0:37:99:0,111,2418	1/1:2,24:26:69.24:1108,69,0	0/0:33,0:33:93.32:0,93,2050	0/0:19,0:19:57.20:0,57,1244	0/0:18,0:18:51.18:0,51,1126	0/0:28,0:28:84.29:0,84,1854	0/0:11,0:11:33.11:0,33,729	0/0:9,0:9:27.09:0,27,596	0/0:21,0:21:60.21:0,60,1322	0/0:34,0:34:96.33:0,96,2094	0/0:42,0:42:99:0,123,2636	0/0:31,0:31:81.28:0,81,1787	1/1:1,33:34:93.32:1494,93,0	1/1:0,15:15:36.12:579,36,0	0/0:22,0:22:63.22:0,63,1377	0/0:22,0:22:60.21:0,60,1326	0/0:42,0:42:99:0,123,2699	0/0:16,0:16:45.15:0,45,924
chr10	33809928	.	A	AC	14080.98	PASS	AB=0.586;AC=50;AF=0.893;AN=56;BaseQRankSum=1.785;DP=619;FS=1.999;HRun=1;HaplotypeScore=145.1280;InbreedingCoeff=0.4488;MQ=78.53;MQ0=0;MQRankSum=-7.402;QD=24.40;ReadPosRankSum=11.535;VQSLOD=3.4024;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,22:26:7.96:528,8,0	1/1:1,14:15:17.15:332,17,0	0/0:18,0:18:51.12:0,51,633	0/0:24,0:24:69.11:0,69,869	1/1:1,21:23:24.99:508,25,0	1/1:4,17:21:32.72:488,33,0	1/1:4,12:16:6.94:360,7,0	1/1:8,22:30:3.15:646,3,0	1/1:2,23:25:72.15:758,72,0	1/1:6,25:31:54.79:850,55,0	1/1:6,21:27:8.35:543,8,0	1/1:5,18:23:64.97:709,65,0	1/1:2,11:13:18.22:320,18,0	1/1:1,25:26:78.17:827,78,0	1/1:0,16:16:45.03:448,45,0	1/1:2,16:18:15.26:455,15,0	0/1:5,9:14:19.10:281,0,19	1/1:1,3:4:12.02:117,12,0	0/1:5,17:22:10.84:460,0,11	1/1:1,29:30:68.10:798,68,0	1/1:6,22:28:1.71:532,2,0	1/1:5,25:30:35.83:679,36,0	1/1:3,17:22:26.14:410,26,0	1/1:2,22:24:28.18:600,28,0	1/1:1,22:23:43.88:592,44,0	1/1:0,24:24:72.17:782,72,0	1/1:5,26:31:61.05:742,61,0	1/1:3,12:15:1.23:315,1,0
chr10	33809929	.	A	AG	13137.62	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=3.444;DP=623;FS=2.926;HRun=1;HaplotypeScore=149.8854;InbreedingCoeff=0.9717;MQ=78.45;MQ0=0;MQRankSum=-8.429;QD=22.61;ReadPosRankSum=9.040;VQSLOD=4.4177;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,22:26:59.49:531,59,0	1/1:1,14:15:33.51:319,34,0	0/0:17,0:17:51.05:0,51,616	0/0:25,0:25:66.19:0,66,809	1/1:2,21:23:29.75:444,30,0	1/1:3,17:20:31.31:381,31,0	1/1:4,12:16:32.19:352,32,0	1/1:9,22:31:31.25:571,31,0	1/1:2,23:25:72.06:687,72,0	1/1:6,25:31:70.96:796,71,0	1/1:6,21:27:30.56:532,31,0	1/1:5,18:23:61.56:586,62,0	1/1:1,11:12:36:331,36,0	1/1:1,25:26:78.07:749,78,0	1/1:1,16:17:44.91:404,45,0	1/1:2,16:18:28.28:420,28,0	1/1:5,9:14:28.30:340,28,0	1/1:1,3:4:11.99:105,12,0	1/1:5,17:22:36.67:494,37,0	1/1:1,29:30:74.01:721,74,0	1/1:6,22:28:37.15:537,37,0	1/1:5,25:30:58.62:616,59,0	1/1:5,17:22:32.26:375,32,0	1/1:2,22:24:52.16:591,52,0	1/1:2,22:24:62.91:578,63,0	1/1:0,24:24:72.10:710,72,0	1/1:3,26:34:67.10:677,67,0	1/1:3,12:15:13.87:290,14,0
chr10	33810154	.	TC	T	18942.18	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-1.047;DP=663;FS=0.623;HRun=5;HaplotypeScore=140.6790;InbreedingCoeff=0.9974;MQ=85.66;MQ0=0;MQRankSum=-9.956;QD=30.70;ReadPosRankSum=6.365;VQSLOD=2.5988;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,52:53:99:1699,150,0	1/1:1,11:12:30.08:337,30,0	0/0:22,0:22:54.02:0,54,654	0/0:24,0:23:62.69:0,63,804	1/1:1,20:21:54.15:609,54,0	1/1:0,21:21:57.16:645,57,0	1/1:1,34:35:87.25:987,87,0	1/1:2,26:28:78.21:874,78,0	1/1:1,19:20:51.15:578,51,0	1/1:2,28:30:87.21:971,87,0	1/1:0,23:23:66.19:747,66,0	1/1:0,20:20:51.15:578,51,0	1/1:1,22:23:56.79:640,57,0	1/1:2,23:25:63.01:714,63,0	1/1:0,15:15:42.12:476,42,0	1/1:0,27:27:78.22:884,78,0	1/1:1,30:31:87.21:972,87,0	1/1:0,9:9:24.07:271,24,0	1/1:1,17:18:51.14:578,51,0	1/1:3,26:29:81.23:915,81,0	1/1:4,30:34:90.26:1018,90,0	1/1:0,9:9:24.07:272,24,0	1/1:0,24:24:69.20:781,69,0	1/1:2,29:31:78.22:884,78,0	1/1:1,12:13:33.09:373,33,0	1/1:1,19:20:57.16:646,57,0	1/1:3,31:34:96.27:1086,96,0	1/1:0,12:12:36.10:408,36,0
chr10	33810159	.	CA	C	4785.49	PASS	AB=0.995;AC=47;AF=0.839;AN=56;BaseQRankSum=9.313;DP=677;FS=6.919;HRun=1;HaplotypeScore=189.7803;InbreedingCoeff=0.3494;MQ=85.47;MQ0=0;MQRankSum=-7.982;QD=7.61;ReadPosRankSum=10.817;VQSLOD=0.8935;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:53,0:53:99:481,109,0	1/1:11,1:12:25.92:124,26,0	0/0:21,0:21:62.98:0,63,885	0/0:27,0:26:69.80:0,70,968	0/1:22,0:22:12.10:134,0,12	1/1:23,0:23:6.08:149,6,0	1/1:34,0:34:72.48:267,72,0	1/1:29,0:29:27.44:142,27,0	1/1:20,0:20:21.72:133,22,0	1/1:30,0:30:32.12:171,32,0	1/1:23,0:23:55.39:207,55,0	1/1:21,0:21:21.35:144,21,0	1/1:23,1:24:26.51:188,27,0	1/1:24,0:24:31.42:178,31,0	0/1:17,0:17:8.08:98,0,8	1/1:27,0:27:65.75:255,66,0	1/1:31,0:31:73.98:294,74,0	1/1:9,0:9:21.21:90,21,0	1/1:17,0:17:37.27:121,37,0	1/1:28,1:29:47.71:275,48,0	0/1:35,1:36:11.79:218,0,12	1/1:9,0:9:20.37:79,20,0	1/1:24,0:24:60.64:263,61,0	1/1:31,0:31:22.03:196,22,0	1/1:12,0:12:27.58:104,28,0	0/1:21,0:21:7.76:84,0,8	1/1:34,0:34:59.54:286,60,0	0/1:17,0:17:72.56:105,0,73
chr10	33810410	.	T	TC	24126.21	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-4.095;DP=580;FS=34.342;HRun=0;HaplotypeScore=76.4870;InbreedingCoeff=0.8365;MQ=82.62;MQ0=0;MQRankSum=-8.572;QD=44.19;ReadPosRankSum=4.729;VQSLOD=2.5145;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,36:36:99:1583,99,0	1/1:0,7:7:21.07:336,21,0	0/0:16,0:17:0.01:0,0,455	0/0:16,1:17:20.51:0,21,475	1/1:1,24:25:75.26:1192,75,0	1/1:5,20:25:54.18:863,54,0	1/1:1,11:12:33.11:528,33,0	1/1:0,28:28:84.23:1249,84,0	1/1:0,19:19:51.17:815,51,0	1/1:0,25:25:69.22:1079,69,0	1/1:0,27:27:81.28:1294,81,0	1/1:1,19:20:51.17:815,51,0	1/1:0,13:13:39.13:623,39,0	1/1:0,22:22:63.21:1007,63,0	1/1:0,21:21:60.20:959,60,0	1/1:1,22:22:63.21:1004,63,0	1/1:0,21:21:60.20:959,60,0	1/1:0,9:9:21.07:336,21,0	1/1:1,17:18:54.18:863,54,0	1/1:0,26:26:78.27:1247,78,0	1/1:0,33:33:84.29:1343,84,0	1/1:0,20:20:54.18:863,54,0	1/1:0,14:14:42.14:672,42,0	1/1:0,14:14:39.13:624,39,0	1/1:0,24:25:75.24:1176,75,0	1/1:2,24:26:69.21:1068,69,0	1/1:0,30:30:84.29:1343,84,0	1/1:0,7:7:18.06:288,18,0
chr10	33810550	.	T	TAA	13252.26	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-3.565;DP=570;FS=0.761;HRun=11;HaplotypeScore=157.6235;InbreedingCoeff=0.9349;MQ=74.09;MQ0=0;MQRankSum=-2.477;QD=25.34;ReadPosRankSum=1.243;VQSLOD=3.1656;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,0:27:18.82:125,19,0	1/1:4,6:10:15.05:217,15,0	0/0:20,0:21:8.91:0,9,156	0/0:9,0:10:16.45:0,16,104	1/1:7,24:34:74.22:1004,74,0	1/1:2,13:17:38.62:530,39,0	1/1:2,9:11:24.08:348,24,0	1/1:12,20:38:78.62:898,79,0	1/1:5,7:12:24.08:346,24,0	1/1:7,22:31:60.15:793,60,0	1/1:2,21:25:68.50:824,68,0	1/1:3,0:20:36.06:343,36,0	1/1:6,17:25:50.14:667,50,0	1/1:5,12:18:35.56:463,36,0	0/0:3,0:16:35.67:0,36,154	1/1:5,14:20:32.60:438,33,0	1/1:2,13:15:33.11:478,33,0	1/1:1,9:10:24.08:348,24,0	1/1:5,15:22:44.60:564,45,0	1/1:9,27:37:79.91:1040,80,0	1/1:4,6:11:9.03:130,9,0	1/1:3,7:13:25.50:263,26,0	1/1:11,0:30:54.09:523,54,0	1/1:3,1:14:18.04:188,18,0	1/1:3,17:21:51.16:724,51,0	1/1:3,19:24:57.15:767,57,0	1/1:5,25:32:75.58:1016,76,0	1/1:0,5:5:15.05:217,15,0
chr10	33810976	.	G	GT	3470.53	PASS	AC=46;AF=0.885;AN=52;BaseQRankSum=3.136;DP=407;FS=23.344;HRun=4;HaplotypeScore=58.5371;InbreedingCoeff=0.5648;MQ=62.41;MQ0=61;MQRankSum=-2.535;QD=11.09;ReadPosRankSum=-0.382;VQSLOD=0.4025;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:15,2:10:11.94:109,12,0	./.	0/0:35,0:17:42.58:0,43,463	0/0:34,0:19:35.91:0,36,389	1/1:13,0:12:20.73:156,21,0	1/1:22,4:20:40.75:443,41,0	1/1:1,14:9:0.47:1,0,0	1/1:1,22:17:48.14:598,48,0	1/1:15,0:15:6.02:70,6,0	1/1:17,1:16:36.48:435,36,0	1/1:6,0:5:6.02:76,6,0	1/1:12,0:11:11.80:42,12,0	1/1:11,0:9:11.64:134,12,0	1/1:12,0:12:11.66:79,12,0	1/1:11,3:9:5.85:34,6,0	1/1:11,0:11:17.65:216,18,0	1/1:8,2:6:2.90:16,3,0	1/1:5,4:5:6.02:76,6,0	1/1:2,8:10:24.07:294,24,0	1/1:12,1:9:8.83:55,9,0	1/1:3,10:7:1.25:3,1,0	0/0:3,4:3:0:0,0,0	1/1:17,3:14:21.79:161,22,0	1/1:8,4:6:2.37:8,2,0	./.	1/1:14,1:13:28.28:331,28,0	1/1:11,0:10:2.93:19,3,0	1/1:3,3:3:9.03:114,9,0
chr10	33810979	.	T	TTTGGGTG	7309.06	PASS	AB=1.000;AC=44;AF=0.815;AN=54;BaseQRankSum=-3.074;DP=501;FS=23.736;HRun=0;HaplotypeScore=106.2028;InbreedingCoeff=0.5572;MQ=55.59;MQ0=64;MQRankSum=-0.879;QD=18.05;ReadPosRankSum=-1.064;VQSLOD=2.3169;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:12:12.04:240,12,0	./.	0/0:34,0:16:44.83:0,45,708	0/0:32,0:17:32.36:0,32,577	1/1:7,9:22:20.98:396,21,0	1/1:28,0:22:51.16:1016,51,0	1/1:18,0:12:2.31:48,2,0	1/1:23,0:17:29.24:923,29,0	1/1:18,0:18:7.84:116,8,0	1/1:23,0:21:28.09:879,28,0	1/1:11,0:10:6.02:130,6,0	0/0:12,0:11:9.65:0,10,54	1/1:16,0:14:21.07:419,21,0	1/1:16,0:16:14.88:126,15,0	1/1:14,0:9:6:54,6,0	1/1:16,0:16:20.87:359,21,0	1/1:6,0:13:5.95:123,6,0	1/1:9,0:5:6.02:102,6,0	1/1:12,0:10:24.54:455,25,0	1/1:21,0:17:12:165,12,0	1/1:16,0:9:0.47:1,0,0	1/1:9,0:5:3.01:44,3,0	0/1:22,0:16:51.06:201,0,51	0/0:13,0:7:2.92:0,3,17	0/1:26,0:25:0:0,0,0	1/1:27,0:25:67.46:1161,67,0	1/1:10,0:9:2.93:19,3,0	1/1:10,0:7:15.05:332,15,0
chr10	33810980	.	T	TTGG	5919.77	PASS	AB=0.586;AC=44;AF=0.815;AN=54;BaseQRankSum=-1.281;DP=511;FS=9.101;HRun=0;HaplotypeScore=103.2892;InbreedingCoeff=0.4831;MQ=53.18;MQ0=68;MQRankSum=-1.714;QD=14.26;ReadPosRankSum=3.810;VQSLOD=3.5976;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:9,8:12:12.04:220,12,0	./.	0/0:34,0:16:44.83:0,45,708	0/0:30,0:15:32.36:0,32,577	1/1:23,0:23:15.68:234,16,0	1/1:14,8:23:32.74:763,33,0	1/1:19,0:13:3.39:38,3,0	1/1:23,0:17:29.06:910,29,0	1/1:4,12:18:6.91:113,7,0	1/1:7,15:21:23.77:774,24,0	1/1:7,0:11:6.02:130,6,0	1/1:0,0:11:0.79:47,1,0	1/1:6,8:14:20.55:261,21,0	1/1:5,10:16:11.06:78,11,0	1/1:3,9:9:6.02:146,6,0	0/1:4,12:16:3.77:314,0,4	1/1:17,0:14:2.16:52,2,0	1/1:5,0:4:5.99:102,6,0	1/1:12,0:10:20.09:427,20,0	1/1:8,8:17:11.91:112,12,0	0/0:16,0:10:1.25:0,1,18	0/0:8,0:5:1.82:0,2,5	1/1:7,0:16:21:261,21,0	1/1:7,0:9:2.46:11,2,0	0/1:8,16:25:0:0,0,0	1/1:16,10:26:40.57:685,41,0	1/1:0,8:9:2.08:18,2,0	1/1:7,0:7:14.86:225,15,0
chr10	33811864	.	GA	G	14974.92	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=5.828;DP=534;FS=6.631;HRun=5;HaplotypeScore=118.0534;InbreedingCoeff=0.9946;MQ=73.74;MQ0=0;MQRankSum=-4.944;QD=30.31;ReadPosRankSum=4.537;VQSLOD=4.0066;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,20:21:51.14:578,51,0	1/1:2,8:10:20.76:238,21,0	0/0:13,0:13:31.50:0,32,381	0/0:7,0:7:18.06:0,18,237	1/1:2,18:20:45.12:510,45,0	1/1:1,22:23:63.18:714,63,0	1/1:2,13:15:33.09:374,33,0	1/1:1,19:20:57.16:646,57,0	1/1:3,10:13:30.08:340,30,0	1/1:1,29:30:87.18:970,87,0	1/1:1,19:20:51.12:566,51,0	1/1:2,14:16:39.11:442,39,0	1/1:0,16:16:42.12:476,42,0	1/1:2,18:20:51.14:578,51,0	0/0:20,0:19:51.16:0,51,681	1/1:0,16:16:48.11:532,48,0	1/1:1,17:18:48.14:544,48,0	1/1:1,10:11:27.08:306,27,0	1/1:1,12:13:36.09:400,36,0	1/1:2,37:39:99:1259,111,0	1/1:0,16:16:48.14:544,48,0	1/1:2,18:20:54.15:612,54,0	1/1:0,25:25:72.21:817,72,0	1/1:0,13:13:36.10:408,36,0	1/1:0,13:13:36.10:408,36,0	1/1:0,26:26:78.22:885,78,0	1/1:0,34:34:93.27:1055,93,0	1/1:0,26:26:69.18:772,69,0
chr10	33812403	.	GA	G	17960.71	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=6.231;DP=609;FS=1.237;HRun=4;HaplotypeScore=126.8007;InbreedingCoeff=0.9992;MQ=87.69;MQ0=0;MQRankSum=-10.890;QD=32.19;ReadPosRankSum=6.568;VQSLOD=3.1742;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,38:38:99:1187,99,0	1/1:1,13:14:36.11:431,36,0	0/0:28,0:28:78.25:0,78,1057	0/0:23,0:23:51.13:0,51,646	1/1:1,23:24:66.20:791,66,0	1/1:0,31:31:87.27:1043,87,0	1/1:0,14:14:39.12:464,39,0	1/1:0,32:32:93.23:1090,93,0	1/1:3,19:22:48.15:575,48,0	1/1:2,21:23:63.13:729,63,0	1/1:0,15:15:42.13:504,42,0	1/1:0,21:21:57.17:683,57,0	1/1:1,17:18:48.15:576,48,0	1/1:1,16:17:48.15:575,48,0	1/1:1,21:22:54.16:647,54,0	1/1:1,19:20:51.16:612,51,0	1/1:0,16:16:45.14:540,45,0	1/1:1,9:10:27.08:324,27,0	1/1:0,21:21:63.19:756,63,0	1/1:1,21:22:63.19:754,63,0	1/1:0,27:27:63.19:755,63,0	1/1:1,21:22:54.17:648,54,0	1/1:0,16:16:45.14:540,45,0	1/1:0,26:26:66.20:792,66,0	1/1:0,12:12:36.11:432,36,0	1/1:0,25:25:75.23:899,75,0	1/1:1,33:34:93.29:1115,93,0	1/1:0,16:16:42.13:503,42,0
chr10	33813080	.	TGG	T	12910.59	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-5.749;DP=562;FS=31.994;HRun=11;HaplotypeScore=123.5228;InbreedingCoeff=0.9878;MQ=71.39;MQ0=1;MQRankSum=-3.777;QD=24.59;ReadPosRankSum=5.044;VQSLOD=2.3925;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,29:34:54.20:889,54,0	1/1:0,11:11:27.03:275,27,0	0/0:17,0:19:38.93:0,39,450	0/0:17,0:15:29.98:0,30,394	1/1:2,22:24:51.11:543,51,0	1/1:6,25:31:71.93:730,72,0	1/1:3,11:14:33.03:351,33,0	1/1:9,11:19:32.51:339,33,0	1/1:3,17:20:53.99:553,54,0	1/1:4,22:25:62.68:669,63,0	1/1:3,17:20:54.09:574,54,0	1/1:1,11:12:30.06:319,30,0	1/1:2,16:18:48.10:511,48,0	1/1:2,14:16:33.04:351,33,0	1/1:0,31:31:90.17:957,90,0	1/1:0,12:12:33.07:351,33,0	1/1:2,13:15:36.03:383,36,0	1/1:1,9:10:21:223,21,0	1/1:5,16:21:47.93:502,48,0	1/1:6,23:29:69.07:722,69,0	1/1:4,22:26:54.02:574,54,0	1/1:1,18:19:45.11:479,45,0	1/1:8,9:17:32.98:330,33,0	1/1:3,20:23:39.09:415,39,0	1/1:3,13:16:35.90:371,36,0	1/1:6,24:30:68.93:734,69,0	1/1:1,24:25:57.10:606,57,0	1/1:0,5:5:15.04:160,15,0
chr10	33813882	.	GT	G	17817.75	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=6.822;DP=522;FS=4.141;HRun=1;HaplotypeScore=141.8916;InbreedingCoeff=0.9717;MQ=89.19;MQ0=0;MQRankSum=-12.157;QD=40.13;ReadPosRankSum=4.585;VQSLOD=4.2324;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,19:21:63.20:867,63,0	1/1:2,8:10:30.09:403,30,0	0/0:33,0:33:99:0,99,1524	0/0:27,0:27:74.60:0,75,1069	1/1:0,24:24:66.22:920,66,0	1/1:1,17:18:54.17:743,54,0	1/1:0,12:12:36.12:502,36,0	1/1:3,20:23:69.22:935,69,0	1/1:1,20:21:63.21:878,63,0	1/1:0,26:26:78.23:1068,78,0	1/1:2,26:28:84.28:1160,84,0	1/1:0,15:15:42.14:585,42,0	1/1:1,11:12:36.11:486,36,0	1/1:0,20:20:60.20:836,60,0	0/0:18,0:18:54.18:0,54,855	1/1:1,23:24:72.13:978,72,0	1/1:1,12:13:39.12:527,39,0	1/1:0,4:4:12.04:168,12,0	1/1:1,10:11:29.18:406,29,0	1/1:1,21:22:63.20:862,63,0	1/1:1,5:6:12.04:167,12,0	1/1:1,20:21:63.21:874,63,0	1/1:0,20:20:54.18:750,54,0	1/1:1,9:10:24.08:334,24,0	1/1:2,13:15:42.13:576,42,0	1/1:0,33:33:99:1366,99,0	1/1:1,28:29:87.29:1218,87,0	1/1:2,4:6:15.05:209,15,0
chr10	33813900	.	ACAGT	A	21286.05	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=7.144;DP=510;FS=15.893;HRun=0;HaplotypeScore=165.3948;InbreedingCoeff=0.9546;MQ=81.54;MQ0=1;MQRankSum=-10.062;QD=45.97;ReadPosRankSum=5.659;VQSLOD=4.5035;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,24:27:60.20:1044,60,0	1/1:0,10:10:30.10:552,30,0	0/0:32,0:32:81.26:0,81,1864	0/0:15,0:15:30.13:0,30,604	1/1:3,19:22:57.15:1012,57,0	1/1:3,13:16:42.13:742,42,0	1/1:2,10:12:30.10:551,30,0	1/1:5,14:19:48.15:828,48,0	1/1:3,18:21:54.19:993,54,0	1/1:6,15:21:45.15:827,45,0	1/1:3,26:29:75.26:1377,75,0	1/1:3,16:19:39.13:717,39,0	1/1:1,11:12:33.11:607,33,0	1/1:1,20:21:60.19:1073,60,0	1/1:0,22:22:60.21:1104,60,0	1/1:2,21:23:66.21:1183,66,0	1/1:4,9:13:33.08:544,33,0	1/1:2,2:4:12.04:210,12,0	1/1:5,3:8:18.05:303,18,0	1/1:2,17:19:51.17:937,51,0	1/1:0,7:7:12.04:221,12,0	1/1:2,25:27:69.24:1263,69,0	1/1:3,19:21:57.19:1031,57,0	1/1:3,9:12:21.07:386,21,0	1/1:2,12:14:39.13:717,39,0	1/1:8,21:29:75.24:1319,75,0	1/1:3,26:29:81.28:1489,81,0	1/1:0,5:5:15.05:257,15,0
chr10	33816460	.	A	AT	439.17	PASS	AB=0.733;AC=11;AF=0.393;AN=28;BaseQRankSum=2.967;DP=91;FS=22.966;HRun=0;HaplotypeScore=64.0038;InbreedingCoeff=0.0406;MQ=92.03;MQ0=4;MQRankSum=-2.505;QD=8.45;ReadPosRankSum=3.313;VQSLOD=1.4030;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:2,0:2:0.94:0,1,2	1/1:0,2:2:5.99:50,6,0	0/0:15,0:10:16.88:0,17,206	0/1:12,0:9:12.10:12,0,36	0/0:9,0:8:7.29:0,7,36	./.	0/0:1,0:1:2.92:0,3,17	./.	./.	0/1:2,2:3:10.69:46,0,11	1/1:0,2:2:6:51,6,0	./.	./.	./.	./.	./.	./.	./.	./.	0/1:3,5:8:40.20:89,0,40	./.	0/1:3,3:6:46.93:63,0,47	0/0:5,0:5:6.25:0,6,33	0/0:1,0:1:0:0,0,0	0/1:6,5:10:36.78:112,0,37	1/1:2,2:5:12.02:124,12,0	./.	./.
chr10	33816462	.	AATT	A	850.97	PASS	AB=1.000;AC=19;AF=0.594;AN=32;BaseQRankSum=0.797;DP=91;FS=34.966;HRun=0;HaplotypeScore=64.0735;InbreedingCoeff=0.5288;MQ=95.80;MQ0=3;MQRankSum=-4.012;QD=16.06;ReadPosRankSum=1.070;VQSLOD=1.3304;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:2,0:2:5.81:0,6,32	1/1:2,0:2:5.47:30,5,0	0/0:16,0:11:16.73:0,17,280	0/1:12,0:9:28.38:28,0,151	0/0:9,0:8:16.29:0,16,111	./.	0/0:1,0:1:2.88:0,3,15	./.	./.	1/1:3,1:3:8.96:96,9,0	1/1:2,0:2:5.93:40,6,0	./.	./.	./.	./.	./.	1/1:1,0:1:1.25:3,1,0	./.	./.	1/1:6,3:8:20.93:219,21,0	./.	1/1:3,3:6:17.97:208,18,0	0/0:5,0:5:1.09:0,1,39	1/1:1,0:1:0.89:2,1,0	1/1:8,3:10:23.92:243,24,0	1/1:5,0:5:11.98:103,12,0	./.	0/0:1,0:1:0:0,0,0
chr10	33816471	.	A	AG	701.31	PASS	AC=20;AF=0.556;AN=36;BaseQRankSum=2.538;DP=108;FS=55.422;HRun=0;HaplotypeScore=70.5432;InbreedingCoeff=0.6656;MQ=98.60;MQ0=1;MQRankSum=-2.755;QD=14.31;ReadPosRankSum=2.349;VQSLOD=2.1656;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:2,0:2:5.64:0,6,27	1/1:0,2:2:5.99:49,6,0	0/0:21,0:14:30.35:0,30,311	0/0:13,0:10:7.59:0,8,150	0/0:11,0:10:22.81:0,23,160	./.	0/0:1,0:1:3.01:0,3,41	./.	./.	1/1:3,1:3:6.79:46,7,0	1/1:1,2:3:5.99:48,6,0	./.	./.	./.	./.	./.	0/0:1,0:1:3.01:0,3,38	./.	1/1:1,0:1:3:25,3,0	1/1:6,5:10:26.46:182,26,0	./.	1/1:5,3:8:20.40:134,20,0	0/0:7,0:7:20.76:0,21,207	0/0:1,0:1:3.01:0,3,39	1/1:6,5:10:26.54:189,27,0	1/1:4,2:6:17.89:138,18,0	1/1:1,0:1:2.94:18,3,0	1/1:2,0:2:2.92:17,3,0
chr10	33816604	.	ATACG	A	563.11	PASS	AB=0.664;AC=21;AF=0.525;AN=40;BaseQRankSum=1.830;DP=112;FS=30.569;HRun=0;HaplotypeScore=37.3378;InbreedingCoeff=0.4001;MQ=34.01;MQ0=23;MQRankSum=1.490;QD=11.73;ReadPosRankSum=1.064;VQSLOD=1.1246;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:4:0:0,0,0	0/1:0,4:4:0.01:0,0,0	0/0:22,0:0:3.01:0,3,40	0/0:20,0:5:8.25:0,8,63	./.	1/1:1,0:1:2.92:17,3,0	1/1:3,0:1:2.94:18,3,0	1/1:0,5:5:15.05:193,15,0	1/1:1,0:1:0.47:1,0,0	1/1:1,7:8:17.58:292,18,0	0/0:0,4:4:0:0,0,0	0/0:2,0:2:0:0,0,0	./.	0/1:0,2:2:0:0,0,0	0/0:3,0:1:0:0,0,0	0/1:1,3:3:0:0,0,0	1/1:3,0:3:3.43:20,3,0	./.	./.	0/1:2,1:3:0.04:0,0,0	./.	./.	./.	0/1:7,0:7:0.16:0,0,0	0/0:2,0:2:0:0,0,1	1/1:0,4:4:6.02:76,6,0	1/1:1,2:2:3.01:37,3,0	./.
chr10	33816787	.	C	CTATT	11970.64	PASS	AB=0.565;AC=33;AF=0.589;AN=56;BaseQRankSum=-2.566;DP=525;FS=146.153;HRun=0;HaplotypeScore=148.9121;InbreedingCoeff=0.9157;MQ=87.53;MQ0=0;MQRankSum=-11.925;QD=54.66;ReadPosRankSum=-1.810;VQSLOD=1.0352;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,141,2630	1/1:1,7:8:18.02:419,18,0	0/0:25,0:25:59.65:0,60,1027	0/0:23,0:23:57.17:0,57,992	0/0:28,0:28:63.22:0,63,1175	0/0:20,0:20:57.20:0,57,1063	0/0:33,0:33:75.26:0,75,1397	1/1:7,6:15:36:684,36,0	0/0:22,0:22:63.17:0,63,1136	1/1:5,15:21:54.19:1439,54,0	1/1:1,10:11:32.99:675,33,0	0/0:28,0:28:72.25:0,72,1324	1/1:1,13:14:36.08:896,36,0	1/1:1,5:9:18.02:419,18,0	1/1:2,10:13:33.07:817,33,0	0/1:3,10:13:22.88:760,0,23	0/0:31,0:31:93.25:0,93,1647	1/1:1,10:11:27.09:719,27,0	1/1:7,8:15:21.04:465,21,0	1/1:4,19:24:62.91:1257,63,0	1/1:1,15:16:38.92:738,39,0	1/1:2,14:16:38.96:798,39,0	0/0:12,0:12:30.10:0,30,560	0/0:32,0:32:84.29:0,84,1558	1/1:2,2:4:11.91:140,12,0	1/1:1,11:13:33.11:866,33,0	1/1:0,8:9:15.05:400,15,0	1/1:1,6:7:18.06:479,18,0
chr10	33817185	.	CTCTA	C	9433.99	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-9.549;DP=662;FS=2.306;HRun=0;HaplotypeScore=150.0151;InbreedingCoeff=0.9992;MQ=81.67;MQ0=0;MQRankSum=-3.304;QD=48.38;ReadPosRankSum=4.889;VQSLOD=5.1647;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,31:35:87.30:1620,87,0	0/0:11,0:11:27.09:0,27,720	0/0:24,0:24:54.14:0,54,1291	0/0:18,0:18:47.66:0,48,1108	1/1:1,20:21:51.17:929,51,0	1/1:1,17:18:51.17:951,51,0	1/1:1,17:18:48.16:896,48,0	0/0:30,0:30:81.27:0,81,1965	1/1:0,30:30:81.28:1511,81,0	0/0:30,0:30:87.30:0,87,2278	0/0:20,0:20:57.20:0,57,1489	1/1:0,15:15:39.13:727,39,0	0/0:22,0:22:66.23:0,66,1760	0/0:23,0:23:63.22:0,63,1680	0/0:30,0:30:84.29:0,84,2146	0/0:24,0:24:72.25:0,72,1876	1/1:1,18:19:51.17:952,51,0	0/0:25,0:25:72.23:0,72,1863	0/0:22,0:22:63.20:0,63,1625	0/0:37,0:37:99:0,102,2658	0/0:27,0:27:81.17:0,81,2090	0/0:36,0:36:99:0,102,2664	1/1:1,21:22:57.20:1063,57,0	1/1:0,17:17:42.14:784,42,0	0/0:24,0:24:72.25:0,72,1919	0/0:26,0:26:75.26:0,75,1976	0/0:31,0:31:90.31:0,90,2365	0/0:7,0:7:21.07:0,21,523
chr10	33817385	.	T	TCGTGATGGAAAAC	78805.89	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-3.088;DP=599;FS=5.745;HRun=0;HaplotypeScore=217.5181;InbreedingCoeff=0.9967;MQ=79.83;MQ0=0;MQRankSum=-12.515;QD=146.75;ReadPosRankSum=6.697;VQSLOD=4.3237;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:33:75.26:4276,75,0	1/1:5,3:10:24.08:1261,24,0	0/0:30,0:30:87.25:0,87,2787	0/0:32,0:32:90.24:0,90,2814	1/1:14,0:26:60.20:2738,60,0	1/1:10,0:19:48.16:2585,48,0	1/1:16,0:29:78.27:4366,78,0	1/1:22,3:28:78.24:4192,78,0	1/1:10,0:22:57.20:3015,57,0	1/1:10,11:23:69.24:4105,69,0	1/1:13,6:20:42.10:2174,42,0	1/1:8,0:15:42.14:2307,42,0	1/1:9,13:24:66.23:3961,66,0	1/1:11,17:28:84.29:5333,84,0	1/1:4,7:12:30.10:1656,30,0	1/1:16,9:26:72.25:4387,72,0	1/1:11,0:22:60.21:3535,60,0	1/1:4,4:10:24.08:1421,24,0	1/1:11,4:16:42.14:2276,42,0	1/1:9,7:18:48.16:2620,48,0	1/1:11,5:16:30.10:1602,30,0	1/1:9,5:17:39.13:1969,39,0	1/1:12,0:29:66.18:3533,66,0	1/1:8,0:18:48.16:2569,48,0	1/1:6,5:13:36.12:2201,36,0	1/1:10,10:22:60.21:3506,60,0	1/1:13,17:30:96.30:5590,96,0	1/1:5,4:9:27.09:1626,27,0
chr10	33817725	.	C	CTT	13964.61	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-1.788;DP=419;FS=1.109;HRun=7;HaplotypeScore=87.8235;InbreedingCoeff=0.8508;MQ=73.43;MQ0=2;MQRankSum=-5.779;QD=36.85;ReadPosRankSum=3.591;VQSLOD=4.6301;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,11:14:27.09:431,27,0	1/1:0,11:11:21.07:345,21,0	0/0:15,0:11:11.49:0,11,98	0/0:25,0:20:13.47:0,13,199	1/1:3,20:23:60.20:972,60,0	1/1:3,10:13:27.09:443,27,0	1/1:1,11:12:33.11:540,33,0	1/1:9,17:26:42.06:600,42,0	1/1:1,4:6:12.04:197,12,0	1/1:2,11:13:36.12:582,36,0	1/1:1,21:23:54.04:797,54,0	1/1:1,6:7:18.06:295,18,0	1/1:0,10:10:30.10:492,30,0	1/1:2,8:10:21.07:345,21,0	1/1:0,8:8:18.06:295,18,0	1/1:1,8:9:18.06:295,18,0	1/1:2,15:17:36.12:591,36,0	1/1:3,14:17:39.13:640,39,0	1/1:6,19:25:63.17:964,63,0	1/1:4,29:33:78.16:1171,78,0	1/1:1,2:3:3.01:49,3,0	1/1:3,9:12:30.10:461,30,0	1/1:6,12:19:41.54:585,42,0	1/1:1,5:6:15.05:246,15,0	1/1:0,14:14:42.14:689,42,0	1/1:1,18:19:57.19:915,57,0	1/1:4,13:18:36.12:590,36,0	1/1:2,8:10:27.09:435,27,0
chr10	33818307	.	CTTGAACTTATGA	C	14259.86	PASS	AB=0.556;AC=17;AF=0.304;AN=56;BaseQRankSum=17.193;DP=681;FS=7.902;HRun=0;HaplotypeScore=238.1347;InbreedingCoeff=0.8846;MQ=59.94;MQ0=0;MQRankSum=-16.567;QD=75.45;ReadPosRankSum=1.736;VQSLOD=3.2935;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,25:32:57.20:2166,57,0	0/0:15,0:15:45.14:0,45,2577	0/0:18,0:17:51.18:0,51,2966	0/0:22,0:22:60.12:0,60,3142	1/1:2,24:26:54:1864,54,0	1/1:0,20:20:57.20:2166,57,0	1/1:3,14:17:36.12:1368,36,0	0/0:29,0:29:87.28:0,87,4294	1/1:3,21:24:60.21:2280,60,0	0/0:31,0:31:90.31:0,90,5426	0/0:20,0:20:60.19:0,60,3295	1/1:0,27:27:68.85:2622,69,0	0/0:24,0:24:66.23:0,66,3864	0/0:34,0:34:93.32:0,93,5081	0/0:22,0:22:66.23:0,66,4032	0/0:29,0:29:84.29:0,84,4592	1/1:6,3:9:3.01:114,3,0	0/0:24,0:24:69.24:0,69,4262	0/0:29,0:29:84.28:0,84,4406	0/0:30,0:30:87.30:0,87,5249	0/0:53,0:53:99:0,157,9123	0/0:22,0:22:66.23:0,66,3708	0/1:3,12:15:99:996,0,155	1/1:3,16:19:17.97:684,18,0	0/0:20,0:20:60.21:0,60,3540	0/0:32,0:32:96.33:0,96,5731	0/0:28,0:27:84.29:0,84,4953	0/0:10,0:10:30.10:0,30,1582
chr10	33819392	.	AC	A	7165.57	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=8.149;DP=741;FS=4.970;HRun=5;HaplotypeScore=119.3285;InbreedingCoeff=0.9991;MQ=80.88;MQ0=0;MQRankSum=-0.953;QD=27.25;ReadPosRankSum=4.309;VQSLOD=3.8971;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,47:51:99:1293,114,0	0/0:13,0:13:33.11:0,33,451	0/0:29,0:29:78.24:0,78,1012	0/0:30,0:30:74.63:0,75,900	1/1:1,28:29:81.20:904,81,0	1/1:0,22:22:63.18:715,63,0	1/1:6,19:25:36.10:408,36,0	0/0:21,0:21:60.18:0,60,791	1/1:2,27:29:66.19:749,66,0	0/0:36,0:36:99:0,99,1308	0/0:16,0:16:48.16:0,48,653	1/1:0,22:22:48.14:544,48,0	0/0:20,0:20:60.11:0,60,794	0/0:28,0:28:78.26:0,78,1065	0/0:42,0:42:99:0,126,1673	0/0:29,0:29:87.25:0,87,1142	1/1:2,39:41:96.62:1227,97,0	0/0:8,0:8:21.06:0,21,271	0/0:26,0:26:66.19:0,66,855	0/0:22,0:22:60.20:0,60,819	0/0:34,0:34:96.32:0,96,1313	0/0:34,0:34:99:0,102,1361	1/1:2,22:24:57.16:646,57,0	1/1:0,20:20:60.17:680,60,0	0/0:23,0:23:66.21:0,66,886	0/0:28,0:28:81.26:0,81,1080	0/0:30,0:29:87.29:0,87,1180	0/0:9,0:9:27.05:0,27,335
chr10	33820068	.	G	GT	17580.87	PASS	AB=0.609;AC=49;AF=0.875;AN=56;BaseQRankSum=-2.381;DP=468;FS=25.727;HRun=1;HaplotypeScore=74.5969;InbreedingCoeff=0.4900;MQ=78.69;MQ0=0;MQRankSum=-4.066;QD=40.05;ReadPosRankSum=1.888;VQSLOD=2.8832;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,32:33:78.27:1246,78,0	1/1:2,3:5:9.03:143,9,0	0/0:13,0:13:33.10:0,33,445	0/0:16,0:16:26.18:0,26,387	1/1:3,8:11:18.06:287,18,0	1/1:0,17:17:33.11:527,33,0	1/1:0,28:28:81.28:1292,81,0	1/1:0,27:27:81.28:1285,81,0	1/1:0,16:16:48.16:767,48,0	0/1:6,8:14:89.07:321,0,89	1/1:3,7:10:15.05:239,15,0	1/1:0,15:15:42.14:671,42,0	1/1:0,20:20:60.20:957,60,0	1/1:0,11:11:33.11:513,33,0	1/1:0,17:17:45.15:718,45,0	1/1:1,6:7:18.06:287,18,0	1/1:0,29:29:84.24:1313,84,0	1/1:0,23:23:69.24:1103,69,0	1/1:1,14:15:42.14:663,42,0	1/1:5,8:13:21.07:329,21,0	1/1:0,21:21:51.17:815,51,0	1/1:1,11:12:33.11:527,33,0	1/1:1,6:7:18.06:284,18,0	1/1:0,24:24:57.19:911,57,0	1/1:6,17:23:48.16:768,48,0	0/1:4,13:17:45.02:572,0,45	1/1:0,19:19:57.19:910,57,0	0/1:2,3:5:24.84:132,0,25
chr10	33834303	.	GTTT	G	10911.38	PASS	AB=0.540;AC=34;AF=0.607;AN=56;BaseQRankSum=-7.675;DP=679;FS=7.223;HRun=13;HaplotypeScore=145.9838;InbreedingCoeff=0.8579;MQ=67.25;MQ0=1;MQRankSum=-3.240;QD=24.80;ReadPosRankSum=3.894;VQSLOD=2.6973;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:20:34.22:0,34,875	1/1:1,8:9:18.03:219,18,0	0/0:28,0:23:35.95:0,36,543	0/0:23,0:20:26.27:0,26,467	0/0:13,0:37:89.24:0,89,1261	0/0:7,0:24:42.14:0,42,659	0/0:4,0:18:36.12:0,36,544	1/1:4,23:27:69.04:792,69,0	0/0:5,0:17:42.13:0,42,609	1/1:4,29:33:87.19:1056,87,0	1/1:3,29:32:72.07:875,72,0	0/0:3,0:26:14.84:0,15,59	1/1:8,18:27:53.99:638,54,0	1/1:4,11:15:30.02:365,30,0	0/0:3,0:20:43.09:0,43,325	1/1:0,30:30:69.19:839,69,0	0/0:8,0:21:48.16:0,48,742	1/1:4,9:13:27.03:328,27,0	1/1:6,11:18:27.15:327,27,0	1/1:7,35:43:77.08:1158,77,0	1/1:3,15:19:31.31:380,31,0	1/1:7,24:32:64.40:780,64,0	0/1:5,2:24:7.57:8,0,62	0/1:1,1:12:20.52:21,0,33	1/1:4,27:32:70.49:865,70,0	1/1:4,23:27:69.12:838,69,0	1/1:4,34:38:93.22:1131,93,0	1/1:0,8:8:24.07:292,24,0
chr10	33836003	.	C	CA	388.44	PASS	AC=26;AF=0.765;AN=34;BaseQRankSum=4.475;DP=150;FS=16.124;HRun=0;HaplotypeScore=32.0920;InbreedingCoeff=0.4698;MQ=108.69;MQ0=0;MQRankSum=-2.999;QD=17.66;ReadPosRankSum=-5.720;VQSLOD=2.1288;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,144,2010	./.	0/0:40,0:38:99:0,99,1331	0/0:37,0:37:99:0,108,1496	1/1:1,0:1:2.99:24,3,0	./.	./.	1/1:3,0:3:9.01:84,9,0	0/0:1,0:1:1.82:0,2,5	./.	1/1:1,0:1:2.99:24,3,0	./.	./.	./.	1/1:0,2:2:2.90:16,3,0	1/1:1,0:1:3:26,3,0	./.	./.	1/1:2,0:2:6:53,6,0	1/1:1,0:1:3:25,3,0	./.	1/1:0,2:2:2.90:16,3,0	./.	1/1:2,0:2:3.01:40,3,0	1/1:2,0:2:6:51,6,0	1/1:3,0:3:9.02:105,9,0	1/1:1,0:1:2.99:24,3,0	1/1:1,0:1:2.98:22,3,0
chr10	33836372	.	CT	C	1942.32	PASS	AB=1.000;AC=50;AF=0.893;AN=56;BaseQRankSum=1.454;DP=411;FS=26.503;HRun=9;HaplotypeScore=73.1828;InbreedingCoeff=0.4353;MQ=51.92;MQ0=9;MQRankSum=-0.267;QD=5.03;ReadPosRankSum=4.099;VQSLOD=-0.0513;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,20:21:48:434,48,0	1/1:6,0:5:6.11:17,6,0	0/0:16,0:9:9.02:0,9,97	0/0:8,0:5:11.59:0,12,100	1/1:30,0:28:26.48:210,26,0	1/1:17,0:16:33.45:158,33,0	1/1:11,0:11:14.30:72,14,0	1/1:22,0:18:24.99:98,25,0	1/1:7,0:7:16.17:77,16,0	1/1:21,1:19:16.91:86,17,0	1/1:27,0:22:28.53:83,29,0	0/1:10,0:9:12.93:33,0,13	1/1:12,0:12:14.96:44,15,0	1/1:11,0:11:14.53:42,15,0	1/1:8,0:8:9.31:27,9,0	1/1:13,0:13:16.34:47,16,0	1/1:15,0:15:22.97:125,23,0	1/1:18,0:18:0.53:28,1,0	1/1:15,0:12:19.98:57,20,0	1/1:18,0:16:14.50:47,15,0	1/1:10,0:10:7.49:21,7,0	1/1:8,0:8:7.05:33,7,0	1/1:9,0:8:10.07:58,10,0	0/1:7,0:7:12.23:28,0,12	1/1:14,0:11:9.74:27,10,0	1/1:13,0:12:17.69:60,18,0	1/1:20,0:20:25.63:74,26,0	1/1:22,0:18:31.33:90,31,0
chr10	33836380	.	TTA	T	7159.99	PASS	AB=0.926;AC=45;AF=0.804;AN=56;BaseQRankSum=-4.711;DP=372;FS=28.907;HRun=0;HaplotypeScore=54.6188;InbreedingCoeff=0.4313;MQ=49.68;MQ0=20;MQRankSum=1.442;QD=21.25;ReadPosRankSum=2.324;VQSLOD=2.7438;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:44.72:0,45,258	1/1:1,3:3:9.03:130,9,0	0/0:8,0:4:10.28:0,10,130	0/0:5,0:4:12.03:0,12,168	0/1:28,0:26:35.95:88,0,36	1/1:14,0:14:21.63:66,22,0	1/1:9,0:8:7.47:18,7,0	1/1:1,20:18:47.96:579,48,0	1/1:5,1:6:10.48:61,10,0	0/1:9,13:18:18.62:578,0,19	1/1:7,22:21:37.05:673,37,0	0/1:10,0:9:3.52:4,0,17	1/1:0,10:10:23.60:349,24,0	1/1:0,8:8:24.08:351,24,0	1/1:0,8:8:15.05:219,15,0	1/1:0,10:10:27.09:394,27,0	1/1:11,0:10:11.82:30,12,0	1/1:1,11:12:11.17:375,11,0	1/1:1,12:11:33.08:459,33,0	1/1:6,13:16:10.81:452,11,0	1/1:0,7:7:12.04:175,12,0	1/1:1,5:5:9.03:128,9,0	0/1:7,0:5:1.87:2,0,6	0/1:5,0:5:12.90:21,0,13	1/1:6,11:12:0.07:200,0,0	1/1:4,13:13:33.01:433,33,0	1/1:2,19:19:45.11:632,45,0	1/1:2,20:18:51.17:742,51,0
chr10	33836381	.	TA	T	4766.57	PASS	AB=1.000;AC=50;AF=0.893;AN=56;BaseQRankSum=-1.553;DP=369;FS=56.382;HRun=2;HaplotypeScore=57.6895;InbreedingCoeff=0.4324;MQ=49.65;MQ0=20;MQRankSum=1.792;QD=13.39;ReadPosRankSum=2.087;VQSLOD=1.0362;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:21,1:22:0.27:71,0,0	1/1:4,0:3:8.71:48,9,0	0/0:7,0:4:9.89:0,10,94	0/0:5,0:4:4.56:0,5,84	1/1:5,24:26:5.60:506,6,0	1/1:0,14:14:39.08:482,39,0	1/1:1,8:8:15.05:192,15,0	1/1:21,0:18:43.60:254,44,0	1/1:1,5:6:17.92:206,18,0	0/1:21,0:17:28.98:179,0,29	1/1:30,0:22:35.45:261,35,0	1/1:1,8:8:9.03:115,9,0	1/1:10,0:10:22.87:130,23,0	1/1:8,0:8:23.22:131,23,0	1/1:8,0:8:14.51:82,15,0	1/1:10,0:10:26.12:147,26,0	1/1:1,10:10:24.08:306,24,0	1/1:12,0:12:26.12:147,26,0	1/1:13,0:11:31.90:179,32,0	1/1:18,0:16:9.81:179,10,0	1/1:7,0:7:11.61:65,12,0	1/1:6,0:5:8.68:47,9,0	1/1:1,6:5:12:131,12,0	1/1:0,4:4:12:136,12,0	0/1:17,0:12:0.45:63,0,0	1/1:16,0:12:32.05:186,32,0	1/1:21,0:19:43.62:248,44,0	1/1:20,0:18:49.37:276,49,0
chr10	33836478	.	CT	C	2905.04	PASS	AC=50;AF=0.926;AN=54;BaseQRankSum=0.953;DP=203;FS=41.441;HRun=1;HaplotypeScore=23.4989;InbreedingCoeff=0.4252;MQ=48.24;MQ0=11;MQRankSum=-4.735;QD=20.60;ReadPosRankSum=4.820;VQSLOD=1.3194;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,11:12:15.05:208,15,0	1/1:0,4:4:9.03:125,9,0	0/0:25,0:13:32.27:0,32,426	0/0:36,0:31:92.78:0,93,1185	./.	1/1:1,8:5:11.63:129,12,0	1/1:0,2:2:3.01:42,3,0	1/1:0,12:8:24.08:333,24,0	1/1:0,5:1:3.01:40,3,0	1/1:1,6:5:15.05:208,15,0	1/1:0,7:6:9.03:122,9,0	1/1:0,3:1:3.01:41,3,0	1/1:0,3:3:9.03:124,9,0	1/1:0,10:4:9.03:125,9,0	1/1:2,6:3:9.03:125,9,0	1/1:0,4:4:12.04:166,12,0	1/1:2,4:2:6.02:80,6,0	1/1:1,2:2:6.02:83,6,0	1/1:0,2:2:6.02:84,6,0	1/1:0,2:2:6.02:83,6,0	1/1:0,8:5:6.02:83,6,0	1/1:0,1:1:3.01:42,3,0	1/1:0,6:6:15.05:207,15,0	1/1:0,2:1:2.96:19,3,0	1/1:0,4:3:6.02:83,6,0	1/1:2,5:7:20.70:234,21,0	1/1:0,4:4:9.03:125,9,0	1/1:0,6:6:9.03:121,9,0
chr10	33836686	.	T	TC	2459.51	PASS	AB=0.809;AC=22;AF=0.393;AN=56;BaseQRankSum=-3.502;DP=819;FS=10.101;HRun=0;HaplotypeScore=51.1240;InbreedingCoeff=-0.6691;MQ=31.29;MQ0=156;MQRankSum=4.518;QD=3.59;ReadPosRankSum=2.561;VQSLOD=1.3863;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:20,16:19:49.25:321,0,49	0/1:6,1:5:27.19:27,0,112	0/0:19,0:4:8.64:0,9,68	0/0:13,0:2:5.91:0,6,49	0/1:23,4:20:36.55:37,0,304	0/1:47,9:39:99:138,0,577	0/0:28,3:18:15.05:0,15,202	0/0:51,7:30:90.27:0,90,1218	0/1:41,6:27:6.24:6,0,380	0/1:36,8:27:99:120,0,679	0/1:19,3:8:63:63,0,88	0/1:25,12:23:99:260,0,346	0/1:19,8:20:99:205,0,127	0/1:31,11:28:99:102,0,459	0/1:45,8:32:36.31:36,0,450	0/1:25,6:20:99:166,0,161	0/1:29,14:26:99:231,0,246	0/1:30,6:22:99:157,0,327	0/1:25,13:18:99:105,0,529	0/0:10,0:5:12.03:0,12,149	0/1:13,2:12:21.24:21,0,149	0/0:3,0:2:5.05:0,5,47	0/1:8,3:9:94.33:94,0,123	0/1:25,11:24:71.25:71,0,214	0/1:13,4:7:47.60:103,0,48	0/1:16,7:12:99:121,0,297	0/1:15,8:13:96.48:96,0,125	0/1:9,4:8:96.20:134,0,96
chr10	33836945	.	TA	T	86.01	PASS	AC=10;AF=0.625;AN=16;BaseQRankSum=-0.953;DP=52;FS=21.553;HRun=8;HaplotypeScore=24.5108;MQ=118.27;MQ0=4;MQRankSum=-1.270;QD=8.60;ReadPosRankSum=2.117;VQSLOD=-0.0477;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:16,0:7:1.07:0,1,54	0/0:16,0:9:14.78:0,15,149	./.	./.	./.	0/0:1,0:1:2.92:0,3,17	./.	1/1:2,2:3:6.01:58,6,0	./.	./.	./.	./.	./.	./.	1/1:0,1:1:3:29,3,0	./.	./.	./.	./.	./.	1/1:1,1:2:3:29,3,0	./.	1/1:1,1:1:3:29,3,0	./.	./.	1/1:0,1:1:3:29,3,0
chr10	33840421	.	A	AC	507.93	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-0.971;DP=408;FS=3.415;HRun=6;HaplotypeScore=44.9974;InbreedingCoeff=0.8149;MQ=67.10;MQ0=0;MQRankSum=-1.207;QD=17.51;ReadPosRankSum=0.876;VQSLOD=3.0408;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,21:29:47.53:603,48,0	0/0:3,0:3:5.75:0,6,60	0/0:18,0:14:20.38:0,20,152	0/0:13,0:13:6.67:0,7,180	0/0:7,0:7:21.03:0,21,207	0/0:10,0:10:30.07:0,30,306	0/0:12,0:12:33.08:0,33,336	0/0:14,0:14:30.06:0,30,306	0/0:15,0:15:36.08:0,36,367	0/0:10,0:10:21.04:0,21,214	0/0:19,0:19:51.10:0,51,512	0/0:12,0:12:36.07:0,36,363	0/0:17,0:17:45.10:0,45,458	0/0:11,0:11:30.06:0,30,306	0/0:19,0:19:54.12:0,54,550	0/0:17,0:17:47.32:0,47,466	0/0:17,0:17:44.69:0,45,438	0/0:15,0:15:39.08:0,39,398	0/0:15,0:15:42.08:0,42,422	0/0:15,0:15:39.08:0,39,396	0/0:26,0:26:78.16:0,78,789	0/0:17,0:17:45.08:0,45,451	0/0:15,0:15:30.06:0,30,305	0/0:14,0:14:30.06:0,30,304	0/0:9,0:9:24.05:0,24,244	0/0:15,0:15:36.04:0,36,352	0/0:14,0:14:42.06:0,42,419	0/0:9,0:9:21.05:0,21,214
chr10	33840582	.	CT	C	3690.80	PASS	AB=0.632;AC=50;AF=0.893;AN=56;BaseQRankSum=2.318;DP=516;FS=5.799;HRun=14;HaplotypeScore=99.9541;InbreedingCoeff=0.3590;MQ=61.58;MQ0=0;MQRankSum=0.468;QD=7.46;ReadPosRankSum=3.201;VQSLOD=2.9734;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,0:22:32.53:95,33,0	1/1:1,7:8:21.71:146,22,0	0/0:14,0:10:0.35:0,0,51	0/0:7,0:4:3:0,3,25	1/1:3,0:24:36.63:107,37,0	1/1:2,0:19:28.49:83,28,0	1/1:2,0:17:28.51:84,29,0	1/1:12,22:35:11.34:318,11,0	1/1:4,0:24:42.53:124,43,0	1/1:9,13:21:12.33:184,12,0	1/1:4,8:14:21.38:133,21,0	1/1:5,0:15:18.27:53,18,0	1/1:7,12:19:8.19:181,8,0	0/1:8,10:18:4.24:102,0,4	0/1:7,10:18:7.71:90,0,8	1/1:5,13:21:1.41:200,1,0	1/1:6,0:31:39.45:116,39,0	1/1:1,12:13:26.73:184,27,0	1/1:7,9:15:30.20:188,30,0	1/1:7,11:20:30.67:196,31,0	1/1:10,19:30:16.06:258,16,0	1/1:5,10:16:34.14:220,34,0	1/1:8,1:23:25.30:85,25,0	1/1:5,0:19:23.94:70,24,0	1/1:2,7:10:17.81:123,18,0	1/1:10,3:15:13.42:77,13,0	1/1:8,11:20:25.69:170,26,0	1/1:0,5:5:14.88:103,15,0
chr10	33841192	.	A	AT	7012.54	PASS	AB=1.000;AC=37;AF=0.661;AN=56;BaseQRankSum=-9.628;DP=408;FS=2.185;HRun=7;HaplotypeScore=61.3825;InbreedingCoeff=0.8934;MQ=61.60;MQ0=4;MQRankSum=-0.911;QD=26.07;ReadPosRankSum=0.909;VQSLOD=5.5745;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,13:15:33.10:399,33,0	1/1:2,2:4:6.02:72,6,0	0/0:14,0:10:4.63:0,5,149	0/1:14,0:7:1.15:1,0,29	0/0:20,0:20:38.84:0,39,359	0/0:19,0:19:45.06:0,45,433	0/0:8,0:8:18.03:0,18,174	1/1:6,17:22:51.16:616,51,0	0/0:14,0:14:39.06:0,39,375	1/1:3,15:16:42.13:507,42,0	1/1:0,13:12:33.10:399,33,0	0/0:12,0:12:24.03:0,24,232	1/1:3,12:15:24.07:289,24,0	1/1:0,6:6:18.06:217,18,0	1/1:3,9:12:27.08:326,27,0	1/1:1,5:5:9.03:109,9,0	0/0:19,0:19:51.06:0,51,486	1/1:1,12:13:36.11:433,36,0	1/1:2,20:22:57.09:653,57,0	1/1:2,18:20:25.19:587,25,0	1/1:1,7:8:18.06:217,18,0	1/1:2,13:15:7.13:370,7,0	0/0:22,0:22:54.06:0,54,514	0/0:11,0:11:23.87:0,24,232	1/1:2,16:18:36.11:435,36,0	1/1:3,13:16:39.10:458,39,0	1/1:4,13:17:39.12:469,39,0	1/1:2,12:14:39.09:456,39,0
chr10	33841202	.	A	AT	2723.14	PASS	AB=1.000;AC=20;AF=0.357;AN=56;BaseQRankSum=-9.979;DP=376;FS=0.000;HRun=9;HaplotypeScore=70.5076;InbreedingCoeff=0.8300;MQ=61.46;MQ0=7;MQRankSum=0.538;QD=18.28;ReadPosRankSum=0.003;VQSLOD=3.5477;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:13:26.93:0,27,225	0/0:4,0:4:2.99:0,3,26	0/1:14,0:10:16.38:16,0,67	0/1:12,0:7:0:0,0,0	1/1:2,12:14:36.06:384,36,0	1/1:2,17:19:45.12:498,45,0	1/1:4,2:6:6.02:66,6,0	0/0:20,0:18:38.98:0,39,338	1/1:1,13:14:36.10:398,36,0	0/0:16,0:15:29.99:0,30,260	0/0:14,0:12:29.99:0,30,259	1/1:4,7:11:18.02:186,18,0	0/0:13,0:13:20.88:0,21,169	0/0:8,0:6:14.99:0,15,130	1/1:3,0:10:22.85:119,23,0	0/0:5,0:4:6:0,6,52	1/1:1,17:18:48.13:531,48,0	0/0:13,0:13:11.36:0,11,193	0/0:19,0:19:38.96:0,39,338	0/0:18,0:18:53.95:0,54,461	0/0:7,0:7:17.99:0,18,155	0/0:14,0:13:32.98:0,33,285	1/1:4,18:22:45.12:497,45,0	1/1:1,8:9:21.06:232,21,0	0/0:18,0:17:29.98:0,30,260	0/0:14,0:14:32.99:0,33,286	0/0:15,0:14:38.21:0,38,319	0/0:14,0:14:32.03:0,32,266
chr10	33842374	.	GT	G	16892.97	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-0.628;DP=574;FS=15.727;HRun=3;HaplotypeScore=63.5257;InbreedingCoeff=0.9954;MQ=58.01;MQ0=5;MQRankSum=5.575;QD=31.81;ReadPosRankSum=4.861;VQSLOD=3.2819;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,27:28:75.24:929,75,0	1/1:1,6:7:18.02:207,18,0	0/0:22,0:20:57.18:0,57,794	0/0:21,0:15:39.03:0,39,532	1/1:2,17:19:48.12:579,48,0	1/1:0,13:13:36.11:446,36,0	1/1:1,13:14:36.11:444,36,0	1/1:2,20:18:48.13:576,48,0	1/1:0,12:12:33.10:409,33,0	1/1:2,22:22:66.21:818,66,0	1/1:3,21:22:54.08:649,54,0	1/1:1,18:19:48.15:595,48,0	1/1:0,18:18:54.17:669,54,0	1/1:0,15:15:42.13:521,42,0	1/1:0,18:18:48.15:595,48,0	1/1:0,17:17:48.15:595,48,0	1/1:2,31:33:81.23:988,81,0	1/1:5,13:18:36.11:446,36,0	1/1:5,22:24:63.12:727,63,0	1/1:1,26:26:78.25:967,78,0	1/1:0,23:23:66.21:818,66,0	1/1:1,21:22:60.15:727,60,0	1/1:3,30:30:81.25:1004,81,0	1/1:1,15:16:35.85:446,36,0	1/1:1,21:21:54.17:669,54,0	1/1:1,16:17:48.13:581,48,0	1/1:1,25:26:72.23:892,72,0	1/1:1,16:16:48.15:595,48,0
chr10	33843084	.	TG	T	20216.36	PASS	AB=0.533;AC=50;AF=0.893;AN=56;BaseQRankSum=-3.597;DP=683;FS=6.964;HRun=3;HaplotypeScore=73.1804;InbreedingCoeff=0.5984;MQ=51.57;MQ0=7;MQRankSum=3.800;QD=31.69;ReadPosRankSum=3.527;VQSLOD=5.1354;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,30:34:2.42:918,2,0	1/1:0,10:10:27.08:334,27,0	0/0:19,0:8:24.08:0,24,318	0/0:25,0:12:24.06:0,24,305	1/1:2,28:30:81.25:1002,81,0	1/1:1,32:33:87.27:1077,87,0	0/1:2,13:15:6.20:374,0,6	1/1:1,35:36:99:1240,105,0	1/1:1,27:27:75.23:925,75,0	1/1:1,24:25:72.21:880,72,0	1/1:3,28:31:78.24:966,78,0	1/1:0,22:22:60.19:742,60,0	1/1:1,26:27:72.22:883,72,0	1/1:0,17:17:48.15:594,48,0	1/1:0,32:32:93.29:1151,93,0	1/1:2,28:30:6.11:888,6,0	0/1:2,15:16:7:373,0,7	1/1:0,12:12:27.08:335,27,0	1/1:2,23:23:63.20:781,63,0	1/1:0,30:30:75.24:928,75,0	1/1:0,20:20:51.16:632,51,0	1/1:0,24:24:57.18:706,57,0	1/1:5,27:32:78.24:966,78,0	1/1:1,12:13:33.10:409,33,0	1/1:1,17:18:48.15:592,48,0	1/1:0,29:29:87.27:1078,87,0	1/1:1,33:34:47.17:1034,47,0	1/1:0,14:14:33.10:409,33,0
chr10	33843180	.	A	AT	11945.85	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-2.470;DP=457;FS=12.998;HRun=7;HaplotypeScore=72.8401;InbreedingCoeff=0.9228;MQ=46.79;MQ0=2;MQRankSum=-1.038;QD=28.04;ReadPosRankSum=4.287;VQSLOD=4.5302;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,0:15:14.10:83,14,0	1/1:3,9:12:27.08:326,27,0	0/0:19,0:12:9.76:0,10,260	0/0:10,0:9:12.06:0,12,190	1/1:0,15:15:39.01:443,39,0	1/1:5,16:21:45.10:525,45,0	1/1:0,9:9:27:293,27,0	1/1:11,25:35:80.20:975,80,0	1/1:0,18:18:39.12:471,39,0	1/1:8,19:27:78.21:918,78,0	1/1:4,10:14:30:320,30,0	1/1:1,10:11:30.06:347,30,0	1/1:1,17:18:45.10:528,45,0	1/1:3,13:16:42.09:491,42,0	1/1:3,17:20:57.06:632,57,0	1/1:1,9:10:27.05:311,27,0	1/1:1,8:9:18.05:215,18,0	1/1:2,6:9:21.01:236,21,0	1/1:5,14:18:42.13:507,42,0	1/1:5,20:26:63.07:710,63,0	1/1:0,9:9:27.08:326,27,0	1/1:6,16:22:53.93:561,54,0	1/1:2,14:15:42.04:474,42,0	1/1:1,5:6:12.04:145,12,0	1/1:3,20:23:63.18:750,63,0	1/1:1,16:17:48.15:580,48,0	1/1:5,12:17:38.46:437,38,0	1/1:1,9:10:30.06:341,30,0
chr10	33843220	.	TTAA	T	253.84	PASS	AB=0.917;AC=21;AF=0.656;AN=32;BaseQRankSum=2.710;DP=264;FS=4.517;HRun=0;HaplotypeScore=60.2234;InbreedingCoeff=0.3749;MQ=61.01;MQ0=0;MQRankSum=-2.456;QD=2.21;ReadPosRankSum=-3.978;VQSLOD=0.2379;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	1/1:4,2:6:8.95:68,9,0	0/0:11,0:10:30.10:0,30,690	0/0:20,0:20:51.17:0,51,1097	0/1:10,1:11:17.98:18,0,27	./.	1/1:6,1:7:5.96:44,6,0	0/0:16,0:16:0:0,0,0	1/1:12,1:13:2.99:24,3,0	1/1:14,0:14:5.99:49,6,0	./.	./.	1/1:12,0:12:2.99:24,3,0	./.	./.	./.	./.	0/0:2,0:2:3.01:0,3,57	1/1:8,1:9:3:26,3,0	./.	./.	./.	1/1:7,1:7:5.97:45,6,0	./.	1/1:8,1:9:2.99:24,3,0	1/1:12,0:12:3:25,3,0	1/1:14,0:14:2.99:24,3,0	0/0:8,0:8:3.01:0,3,54
chr10	33844996	.	CT	C	1580.47	PASS	AB=0.538;AC=9;AF=0.167;AN=54;BaseQRankSum=2.965;DP=326;FS=3.683;HRun=4;HaplotypeScore=57.2603;InbreedingCoeff=0.8005;MQ=45.81;MQ0=4;MQRankSum=-4.976;QD=28.22;ReadPosRankSum=0.050;VQSLOD=3.1982;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:7:15.01:0,15,187	0/0:7,0:7:21.07:0,21,293	0/0:28,0:18:48.13:0,48,612	0/0:20,1:18:48.13:0,48,653	1/1:0,14:14:30.09:355,30,0	1/1:0,15:15:45.14:539,45,0	1/1:0,5:5:15.05:180,15,0	0/0:14,0:14:42.13:0,42,572	1/1:0,15:15:45.14:539,45,0	0/0:15,0:15:45.14:0,45,614	0/0:19,0:19:47.84:0,48,670	0/0:11,0:11:30.06:0,30,397	0/0:8,0:8:24.04:0,24,313	0/0:13,0:13:39.13:0,39,545	0/0:14,0:14:42.08:0,42,548	0/0:5,0:5:15.05:0,15,209	0/1:1,6:7:6.84:129,0,7	0/0:1,0:1:3.01:0,3,42	0/0:10,0:10:30.09:0,30,394	0/0:17,0:17:51.17:0,51,712	0/0:7,0:7:21.07:0,21,294	0/0:11,0:11:30.10:0,30,419	0/0:11,0:11:30.07:0,30,398	./.	0/0:18,0:18:45.15:0,45,628	0/0:11,0:11:33.11:0,33,461	0/0:18,0:18:48.11:0,48,632	0/0:1,0:1:3.01:0,3,42
chr10	33845439	.	TAGG	T	24775.24	PASS	AB=0.548;AC=51;AF=0.911;AN=56;BaseQRankSum=-1.203;DP=598;FS=0.862;HRun=0;HaplotypeScore=143.6235;InbreedingCoeff=0.7794;MQ=55.53;MQ0=1;MQRankSum=0.173;QD=43.62;ReadPosRankSum=4.483;VQSLOD=6.2464;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,20:21:54.15:875,54,0	1/1:1,11:12:30.10:512,30,0	0/0:15,0:10:24.06:0,24,461	0/0:15,0:11:33.11:0,33,744	1/1:2,28:30:75.26:1279,75,0	1/1:1,21:22:60.21:1020,60,0	1/1:1,17:18:51.13:838,51,0	1/1:2,29:29:81.26:1347,81,0	1/1:1,17:18:48.16:817,48,0	1/1:3,27:30:81.25:1326,81,0	1/1:0,32:32:90.26:1488,90,0	1/1:1,20:21:60.20:1021,60,0	1/1:1,15:17:45.15:767,45,0	1/1:0,14:14:33.11:562,33,0	1/1:0,15:15:39.13:664,39,0	1/1:1,15:16:45.15:767,45,0	1/1:2,25:27:66.23:1126,66,0	0/1:3,14:17:24.76:623,0,25	1/1:1,15:15:45.13:737,45,0	1/1:0,28:28:81.28:1380,81,0	1/1:1,18:19:45.54:706,46,0	1/1:1,18:20:54.18:918,54,0	1/1:0,26:26:50.24:868,50,0	1/1:2,13:15:33.11:563,33,0	1/1:2,21:23:51.17:868,51,0	1/1:2,35:37:99:1761,105,0	1/1:0,22:22:57.20:970,57,0	1/1:0,21:21:57.20:972,57,0
chr10	33848156	.	CAT	C	178.78	PASS	AB=0.981;AC=12;AF=0.273;AN=44;BaseQRankSum=-0.333;DP=148;FS=12.600;HRun=0;HaplotypeScore=64.0454;InbreedingCoeff=0.2938;MQ=78.25;MQ0=11;MQRankSum=-3.918;QD=4.06;ReadPosRankSum=0.333;VQSLOD=0.5720;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:10:8.12:0,8,25	./.	0/0:23,0:16:48.01:0,48,481	0/0:28,0:15:44.10:0,44,381	0/0:1,1:2:2.63:0,3,13	0/1:11,1:12:20.64:63,0,21	0/0:6,0:5:1.10:0,1,7	1/1:6,0:4:11.85:79,12,0	0/0:4,1:4:1.25:0,1,3	0/0:1,0:1:2.96:0,3,19	0/0:2,0:2:0:0,0,0	./.	./.	0/0:1,0:1:2.94:0,3,18	1/1:4,1:5:8.87:58,9,0	1/1:1,0:1:2.98:21,3,0	0/1:13,0:13:28.59:56,0,29	0/0:5,0:4:4.98:0,5,32	0/1:2,0:2:2.84:16,0,3	0/0:2,0:2:2.40:0,2,12	1/1:2,0:1:2.50:9,2,0	0/1:2,0:1:0:0,0,0	./.	./.	0/0:5,0:3:4.96:0,5,19	./.	0/0:4,0:4:11.46:0,11,63	0/0:2,0:2:2.96:0,3,19
chr10	33848163	.	AC	A	689.36	PASS	AB=0.758;AC=26;AF=0.650;AN=40;BaseQRankSum=6.736;DP=142;FS=5.869;HRun=1;HaplotypeScore=61.0266;InbreedingCoeff=0.2821;MQ=92.87;MQ0=6;MQRankSum=-5.062;QD=10.77;ReadPosRankSum=0.439;VQSLOD=1.4969;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,3:10:15.04:193,15,0	./.	0/0:26,0:19:54.18:0,54,855	0/0:32,0:19:50.93:0,51,713	1/1:1,1:2:3.47:29,3,0	0/1:9,2:11:18.42:83,0,18	1/1:4,0:3:3:32,3,0	0/0:6,0:4:11.82:0,12,77	./.	0/1:0,1:1:0:0,0,0	0/1:1,1:2:0:0,0,0	./.	./.	1/1:0,1:1:3.01:40,3,0	0/0:5,0:5:2.89:0,3,16	1/1:0,1:1:2.68:11,3,0	0/1:8,3:11:36.31:41,0,36	1/1:2,1:3:3.01:35,3,0	0/1:2,1:2:10.28:27,0,10	1/1:1,1:2:3.01:41,3,0	./.	0/1:1,0:1:0:0,0,0	./.	./.	1/1:1,3:3:6.02:81,6,0	./.	1/1:0,4:4:12.04:163,12,0	1/1:1,1:2:3.01:40,3,0
chr10	33848174	.	A	AT	767.06	PASS	AB=0.750;AC=27;AF=0.711;AN=38;BaseQRankSum=7.524;DP=145;FS=4.494;HRun=1;HaplotypeScore=83.0355;InbreedingCoeff=0.4487;MQ=103.55;MQ0=0;MQRankSum=-7.763;QD=10.51;ReadPosRankSum=3.231;VQSLOD=1.9079;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,0:9:14.53:113,15,0	./.	0/0:19,0:19:57.07:0,57,749	0/0:28,0:24:69.13:0,69,914	1/1:2,1:3:3.01:30,3,0	1/1:3,1:6:14.96:127,15,0	1/1:2,0:3:2.94:19,3,0	1/1:21,0:21:55.52:224,56,0	./.	./.	0/0:6,0:6:0:0,0,0	0/0:3,0:3:0.47:0,0,1	./.	1/1:2,0:2:3:26,3,0	./.	0/1:2,0:3:3.21:3,0,6	1/1:6,2:9:9.02:98,9,0	1/1:1,0:2:5.88:52,6,0	1/1:1,0:1:3.01:35,3,0	1/1:1,0:2:2.98:21,3,0	./.	./.	./.	./.	1/1:1,0:3:5.98:47,6,0	0/0:3,0:3:0:0,0,0	1/1:5,0:6:7.80:57,8,0	1/1:2,0:2:3.01:31,3,0
chr10	33848176	.	AC	A	1722.42	PASS	AC=44;AF=0.917;AN=48;BaseQRankSum=8.357;DP=143;FS=24.256;HRun=2;HaplotypeScore=79.1509;InbreedingCoeff=0.4666;MQ=106.37;MQ0=0;MQRankSum=-8.633;QD=17.58;ReadPosRankSum=-0.557;VQSLOD=2.2573;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,5:9:20.60:153,21,0	1/1:0,3:3:7.79:31,8,0	0/0:19,0:19:54.17:0,54,780	0/0:26,0:24:69.15:0,69,984	1/1:1,2:3:8:47,8,0	1/1:3,3:6:14.96:135,15,0	1/1:1,2:3:5.99:28,6,0	1/1:0,21:21:63.14:650,63,0	1/1:0,3:3:7.94:33,8,0	1/1:0,1:1:2.74:12,3,0	1/1:0,6:6:7.93:35,8,0	1/1:0,3:3:8.22:39,8,0	1/1:0,2:2:2.68:12,3,0	1/1:0,2:2:5.59:35,6,0	./.	1/1:1,2:3:8.36:51,8,0	1/1:4,6:9:20.25:147,20,0	1/1:1,1:2:6.02:67,6,0	1/1:0,1:1:3.01:30,3,0	1/1:1,1:2:5.60:40,6,0	./.	1/1:0,4:4:9.98:35,10,0	./.	./.	1/1:2,1:3:8.61:69,9,0	1/1:0,3:3:8.45:44,8,0	1/1:1,5:6:14.90:125,15,0	1/1:0,2:2:3.01:30,3,0
chr10	33848180	.	TAC	T	2855.92	PASS	AB=0.667;AC=43;AF=0.896;AN=48;BaseQRankSum=8.002;DP=143;FS=26.395;HRun=0;HaplotypeScore=77.4524;InbreedingCoeff=0.4461;MQ=112.56;MQ0=0;MQRankSum=-9.059;QD=28.85;ReadPosRankSum=1.027;VQSLOD=2.3545;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,8:9:24.08:218,24,0	1/1:0,3:3:9.03:103,9,0	0/0:20,0:20:57.15:0,57,965	0/0:24,0:24:62.40:0,62,1073	1/1:0,3:3:9.03:102,9,0	1/1:1,5:6:15.01:183,15,0	1/1:1,2:3:6.02:77,6,0	1/1:1,21:22:66.19:784,66,0	1/1:0,3:3:9.03:105,9,0	1/1:0,1:1:3.01:36,3,0	1/1:0,6:6:9.03:109,9,0	1/1:0,3:3:9.03:111,9,0	1/1:0,2:2:5.85:48,6,0	1/1:0,2:2:6.01:64,6,0	./.	1/1:0,3:3:9.03:109,9,0	1/1:2,8:9:17.57:228,18,0	0/1:1,1:2:4.94:33,0,5	1/1:0,1:1:3.01:38,3,0	1/1:0,2:2:6.02:69,6,0	./.	1/1:0,4:4:12.03:130,12,0	./.	./.	1/1:0,3:3:9.03:103,9,0	1/1:0,3:3:9.02:99,9,0	1/1:0,6:6:15.05:192,15,0	1/1:0,2:2:4.83:41,5,0
chr10	33848196	.	T	TA	1255.71	PASS	AB=0.833;AC=11;AF=0.204;AN=54;BaseQRankSum=-0.052;DP=215;FS=0.770;HRun=3;HaplotypeScore=91.4464;InbreedingCoeff=0.7144;MQ=102.55;MQ0=0;MQRankSum=-3.346;QD=26.16;ReadPosRankSum=2.271;VQSLOD=2.7854;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:20.88:0,21,152	0/0:4,0:4:11.82:0,12,80	0/0:13,0:13:33.03:0,33,394	0/0:21,0:21:28.47:0,28,469	1/1:0,8:8:21.07:271,21,0	1/1:1,9:10:27.09:350,27,0	1/1:1,3:4:6.02:78,6,0	0/0:33,0:33:83.64:0,84,508	1/1:0,6:6:18.06:233,18,0	0/0:4,0:4:11.32:0,11,60	0/0:9,0:9:26.58:0,27,184	0/0:4,0:4:11.81:0,12,90	0/0:4,0:4:11.64:0,12,70	0/0:2,0:2:5.97:0,6,43	0/0:3,0:3:5.65:0,6,28	0/1:4,1:5:24.18:24,0,62	1/1:2,13:14:36.59:466,37,0	0/0:5,0:5:12.38:0,12,87	0/0:5,0:5:14.54:0,15,85	0/0:5,0:5:9.07:0,9,52	0/0:1,0:1:2.88:0,3,15	0/0:8,0:8:23.58:0,24,158	0/0:2,0:2:5.75:0,6,30	./.	0/0:8,0:8:17.59:0,18,115	0/0:6,0:6:17.64:0,18,122	0/0:15,0:15:40.94:0,41,252	0/0:6,0:6:15.45:0,15,87
chr10	33849322	.	T	TA	3077.38	PASS	AB=1.000;AC=50;AF=0.893;AN=56;BaseQRankSum=4.517;DP=241;FS=0.000;HRun=1;HaplotypeScore=214.1471;InbreedingCoeff=0.5709;MQ=71.58;MQ0=1;MQRankSum=-7.276;QD=15.01;ReadPosRankSum=2.745;VQSLOD=3.6467;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,0:7:10.70:55,11,0	1/1:6,0:6:16.09:91,16,0	0/0:23,0:16:47.96:0,48,536	0/0:13,0:9:27.09:0,27,350	0/1:11,0:11:5.51:47,0,6	1/1:13,2:15:38.80:223,39,0	1/1:6,0:6:9.40:76,9,0	1/1:5,0:5:6.46:50,6,0	1/1:8,0:8:20.03:124,20,0	1/1:15,0:15:37.75:300,38,0	1/1:8,0:8:18.51:112,19,0	1/1:8,0:8:20.38:121,20,0	1/1:7,0:7:14.21:124,14,0	1/1:8,0:8:20.97:132,21,0	1/1:4,1:5:14.09:78,14,0	1/1:7,0:7:17.76:136,18,0	0/1:7,0:7:0.05:33,0,0	1/1:4,0:3:8.73:53,9,0	1/1:7,0:7:20.98:220,21,0	1/1:13,0:13:38.05:254,38,0	1/1:3,1:4:11.93:106,12,0	1/1:5,0:5:14.82:100,15,0	1/1:9,0:9:9.92:78,10,0	1/1:7,0:7:8.79:56,9,0	1/1:8,0:8:20.55:124,21,0	1/1:12,0:12:31.14:247,31,0	1/1:11,0:11:32.44:227,32,0	1/1:2,0:2:5.94:42,6,0
chr10	33849671	.	A	AT	358.83	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-4.024;DP=415;FS=2.515;HRun=6;HaplotypeScore=40.5759;InbreedingCoeff=0.5967;MQ=67.17;MQ0=0;MQRankSum=0.224;QD=23.92;ReadPosRankSum=1.390;VQSLOD=2.8223;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,13:15:36.12:453,36,0	0/0:7,0:7:21.05:0,21,214	0/0:7,0:6:8.98:0,9,81	0/0:4,0:4:2.99:0,3,24	0/0:28,0:27:78.17:0,78,794	0/0:13,0:13:36.08:0,36,366	0/0:7,0:7:15.03:0,15,153	0/0:39,0:39:96.21:0,96,974	0/0:13,0:13:36.08:0,36,367	0/0:25,0:25:66.14:0,66,673	0/0:24,0:24:69.14:0,69,695	0/0:10,0:10:27.06:0,27,275	0/0:13,0:13:36.08:0,36,367	0/0:6,0:6:18.04:0,18,183	0/0:13,0:13:30.05:0,30,299	0/0:13,0:13:36.06:0,36,359	0/0:14,0:14:36.08:0,36,367	0/0:13,0:13:36.08:0,36,367	0/0:22,0:22:63.14:0,63,643	0/0:26,0:26:72.16:0,72,734	0/0:2,0:2:3.01:0,3,31	0/0:4,0:4:12.01:0,12,116	0/0:19,0:19:54.12:0,54,551	0/0:2,0:2:3.01:0,3,31	0/0:17,0:17:51.11:0,51,520	0/0:17,0:17:42.09:0,42,429	0/0:27,0:27:75.16:0,75,758	0/0:14,0:14:36.08:0,36,367
chr10	33851053	.	AGAAAGCATT	A	40602.97	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=4.183;DP=645;FS=0.559;HRun=0;HaplotypeScore=223.6226;InbreedingCoeff=0.8592;MQ=77.71;MQ0=0;MQRankSum=-11.245;QD=68.13;ReadPosRankSum=7.036;VQSLOD=4.0959;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,35:38:66.23:2005,66,0	1/1:1,9:10:24.08:758,24,0	0/0:28,0:28:83.93:0,84,3250	0/0:21,0:21:44.94:0,45,2276	1/1:2,13:15:17.67:535,18,0	1/1:0,28:28:72.25:2263,72,0	1/1:1,16:17:39.13:1185,39,0	1/1:7,39:46:99:3323,114,0	1/1:3,29:32:72.25:2275,72,0	1/1:1,17:18:48.14:1396,48,0	1/1:0,11:11:27.09:816,27,0	1/1:2,20:22:57.20:1800,57,0	1/1:3,28:31:87.30:2732,87,0	1/1:2,19:21:45.15:1421,45,0	1/1:1,29:30:75.26:2368,75,0	1/1:0,25:25:72.25:2275,72,0	1/1:0,15:15:23.84:758,24,0	1/1:0,6:6:18.06:569,18,0	1/1:6,16:22:48.11:1239,48,0	1/1:3,23:26:48.12:1412,48,0	1/1:11,25:36:34.17:1105,34,0	1/1:1,25:27:66.23:2011,66,0	1/1:2,21:23:48.16:1420,48,0	1/1:2,9:11:5.56:189,6,0	1/1:0,21:21:57.20:1725,57,0	1/1:1,20:21:60.21:1894,60,0	1/1:1,38:39:96.18:3033,96,0	1/1:1,4:5:3.01:95,3,0
chr10	33851540	.	T	TTGTC	39864.02	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=3.417;DP=733;FS=5.057;HRun=0;HaplotypeScore=311.7769;InbreedingCoeff=0.9612;MQ=62.46;MQ0=5;MQRankSum=-9.703;QD=58.97;ReadPosRankSum=7.415;VQSLOD=4.5311;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,26:39:50.30:1928,50,0	1/1:4,7:11:25.80:679,26,0	0/0:30,0:29:65.36:0,65,1138	0/0:27,0:26:65.82:0,66,1087	1/1:13,23:38:43.34:1782,43,0	1/1:4,21:26:68.54:1653,69,0	1/1:1,22:23:57.02:1440,57,0	1/1:23,18:41:81.26:2027,81,0	1/1:1,32:33:87.30:2227,87,0	1/1:4,32:36:93.29:2285,93,0	1/1:8,13:21:47.15:1177,47,0	1/1:7,19:25:66.20:1546,66,0	1/1:8,24:31:75.60:1992,76,0	1/1:6,22:28:81.28:2001,81,0	1/1:10,24:34:89.55:2189,90,0	1/1:9,22:31:82.92:2068,83,0	1/1:5,15:20:40.86:1194,41,0	1/1:7,12:17:36.01:914,36,0	1/1:13,18:32:63.22:1596,63,0	1/1:14,29:42:95.45:2332,95,0	1/1:3,8:11:24.08:580,24,0	1/1:4,22:25:69.24:1712,69,0	1/1:9,12:20:48.15:1114,48,0	1/1:3,4:7:14.97:272,15,0	1/1:3,19:22:57.20:1488,57,0	1/1:6,17:23:57.19:1462,57,0	1/1:4,26:30:75.26:1969,75,0	1/1:0,3:3:9.03:237,9,0
chr10	33851554	.	T	TACTGATCTTC	73444.71	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=5.678;DP=762;FS=1.174;HRun=0;HaplotypeScore=287.5782;InbreedingCoeff=0.9258;MQ=49.99;MQ0=2;MQRankSum=-10.116;QD=103.88;ReadPosRankSum=5.532;VQSLOD=4.6365;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,22:38:78.25:3609,78,0	1/1:4,5:12:21.06:1036,21,0	0/0:31,0:27:78.25:0,78,2086	0/0:24,0:23:62.72:0,63,1711	1/1:15,24:39:85.01:3416,85,0	1/1:5,20:31:72.25:3706,72,0	1/1:8,14:22:57.18:2744,57,0	1/1:14,9:42:99:4426,111,0	1/1:18,18:36:99:4328,99,0	1/1:15,17:32:90.29:4020,90,0	1/1:4,13:21:51.07:2121,51,0	1/1:5,17:26:57.18:2795,57,0	1/1:4,23:34:81.20:4012,81,0	1/1:9,12:26:54.16:2522,54,0	1/1:9,21:36:87.30:4151,87,0	1/1:6,23:40:78.26:3850,78,0	1/1:2,14:24:45.13:2040,45,0	1/1:7,8:17:33.11:1628,33,0	1/1:26,5:31:81.07:2669,81,0	1/1:8,25:45:99:4673,105,0	1/1:6,4:14:21.07:1046,21,0	1/1:9,17:29:66.19:3209,66,0	1/1:5,10:22:36.08:1712,36,0	1/1:1,5:8:10.73:468,11,0	1/1:9,12:21:57.16:2675,57,0	1/1:8,11:25:66.16:2861,66,0	1/1:12,18:30:78.24:3510,78,0	1/1:1,1:2:6.02:214,6,0
chr10	33852428	.	AT	A	14201.40	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=11.536;DP=655;FS=0.604;HRun=2;HaplotypeScore=124.9006;InbreedingCoeff=0.9762;MQ=80.46;MQ0=0;MQRankSum=-6.173;QD=36.51;ReadPosRankSum=1.557;VQSLOD=4.3959;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:96.33:0,96,1435	1/1:0,12:12:30.10:390,30,0	0/0:21,0:21:43.43:0,43,689	0/0:27,0:26:55.94:0,56,911	0/0:23,0:23:69.23:0,69,1033	0/0:31,0:31:93.30:0,93,1375	0/0:12,0:12:36.10:0,36,518	1/1:1,40:41:99:1543,120,0	0/0:19,0:19:54.18:0,54,807	1/1:0,31:31:90.29:1166,90,0	1/1:0,28:28:84.27:1091,84,0	0/0:17,0:17:51.17:0,51,763	1/1:0,28:28:81.26:1051,81,0	1/1:1,17:18:3.19:538,3,0	0/0:25,0:25:69.23:0,69,1034	1/1:0,28:28:84.27:1091,84,0	0/0:15,0:15:45.15:0,45,673	1/1:0,15:15:45.15:584,45,0	1/1:2,14:16:31.31:518,31,0	1/1:2,21:23:57.19:740,57,0	1/1:1,32:33:84.27:1091,84,0	1/1:1,27:28:78.25:1012,78,0	0/0:17,0:17:51.17:0,51,764	0/0:25,0:25:75.25:0,75,1124	1/1:1,21:22:63.20:818,63,0	1/1:0,29:29:87.28:1129,87,0	1/1:0,27:27:81.26:1051,81,0	1/1:0,10:10:30.10:389,30,0
chr10	33852792	.	TA	T	917.93	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.148;DP=625;FS=0.743;HRun=2;HaplotypeScore=58.7842;InbreedingCoeff=0.9991;MQ=78.93;MQ0=0;MQRankSum=-4.132;QD=29.61;ReadPosRankSum=0.329;VQSLOD=3.0866;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:66.20:0,66,965	0/0:13,0:13:39.13:0,39,570	0/0:19,0:19:54.18:0,54,789	0/0:14,0:14:41.97:0,42,577	0/0:28,0:28:84.28:0,84,1255	0/0:34,0:34:93.30:0,93,1373	0/0:15,0:15:45.13:0,45,651	0/0:26,0:26:75.24:0,75,1090	0/0:26,0:26:78.26:0,78,1168	0/0:29,0:29:87.29:0,87,1303	0/0:17,0:17:48.14:0,48,679	0/0:12,0:12:36.12:0,36,538	0/0:26,0:26:78.26:0,78,1169	0/0:18,0:18:54.18:0,54,807	1/1:0,31:31:78.25:1013,78,0	0/0:24,0:24:72.24:0,72,1061	0/0:25,0:25:72.24:0,72,1079	0/0:15,0:15:39.12:0,39,557	0/0:19,0:19:57.19:0,57,853	0/0:25,0:25:72.23:0,72,1056	0/0:14,0:14:42.14:0,42,630	0/0:25,0:25:72.22:0,72,1040	0/0:18,0:18:51.17:0,51,761	0/0:11,0:11:30.10:0,30,450	0/0:22,0:22:66.22:0,66,987	0/0:36,0:36:99:0,108,1598	0/0:39,0:39:99:0,114,1708	0/0:22,0:22:61.09:0,61,900
chr10	33853178	.	C	CA	847.50	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-7.504;DP=693;FS=13.243;HRun=7;HaplotypeScore=65.3730;InbreedingCoeff=0.9981;MQ=83.40;MQ0=1;MQRankSum=-0.415;QD=27.34;ReadPosRankSum=2.373;VQSLOD=3.4691;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:56:99:0,153,1470	0/0:12,0:12:33.04:0,33,313	0/0:22,0:23:43.66:0,44,388	0/0:17,0:17:30.87:0,31,276	0/0:22,0:22:66.11:0,66,637	0/0:27,0:27:72.11:0,72,695	0/0:29,0:29:81.11:0,81,776	0/0:24,0:24:60.09:0,60,579	0/0:28,0:28:78.12:0,78,753	0/0:28,0:28:68.70:0,69,647	0/0:23,0:23:57.06:0,57,543	0/0:24,0:24:66.06:0,66,623	0/0:25,0:25:72.08:0,72,687	0/0:24,0:24:66.10:0,66,637	1/1:2,29:31:78.24:942,78,0	0/0:21,0:21:60.09:0,60,579	0/0:36,0:36:99:0,99,950	0/0:21,0:21:63.10:0,63,608	0/0:19,0:19:42.05:0,42,405	0/0:26,0:26:63.09:0,63,608	0/0:26,0:25:66.10:0,66,637	0/0:26,0:26:69.11:0,69,666	0/0:19,0:19:57.08:0,57,544	0/0:27,0:27:78.07:0,78,744	0/0:14,0:14:35.95:0,36,334	0/0:23,0:23:63.10:0,63,608	0/0:33,0:33:96.14:0,96,921	0/0:9,0:9:27.04:0,27,260
chr10	33853871	.	CA	C	18697.65	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-4.225;DP=707;FS=7.490;HRun=6;HaplotypeScore=79.4370;InbreedingCoeff=0.9971;MQ=87.39;MQ0=0;MQRankSum=-10.119;QD=28.77;ReadPosRankSum=6.381;VQSLOD=4.8274;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,33:36:90.22:967,90,0	1/1:1,7:8:21.05:226,21,0	0/0:36,0:36:66.72:0,67,899	0/0:21,0:19:30.84:0,31,376	1/1:3,26:29:69.17:741,69,0	1/1:1,24:25:63.16:677,63,0	1/1:0,18:18:51.13:548,51,0	1/1:1,35:36:99:1121,105,0	1/1:1,28:29:81.20:870,81,0	1/1:1,25:26:75.17:796,75,0	1/1:0,17:17:51.13:548,51,0	1/1:2,19:21:54.14:580,54,0	1/1:1,16:17:39.10:419,39,0	1/1:0,28:28:81.20:870,81,0	1/1:1,23:24:60.15:644,60,0	1/1:0,17:17:48.12:516,48,0	1/1:0,31:31:84.21:903,84,0	1/1:0,22:22:66.17:709,66,0	1/1:2,26:28:81.16:846,81,0	1/1:1,33:34:90.22:967,90,0	1/1:0,32:32:90.23:967,90,0	1/1:2,21:23:57.14:612,57,0	1/1:5,29:34:87.20:926,87,0	1/1:1,14:15:42.11:451,42,0	1/1:1,26:27:69.17:742,69,0	1/1:4,29:33:87.17:923,87,0	1/1:3,28:31:78.08:838,78,0	1/1:0,9:9:27.07:290,27,0
chr10	33854793	.	AAG	A	8846.16	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=12.421;DP=445;FS=4.559;HRun=0;HaplotypeScore=205.1210;InbreedingCoeff=0.9806;MQ=81.47;MQ0=4;MQRankSum=-12.615;QD=23.34;ReadPosRankSum=5.582;VQSLOD=5.2063;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,15:17:47.80:371,48,0	1/1:0,9:9:26.67:210,27,0	0/0:20,0:20:60.19:0,60,1153	0/0:20,0:20:60.03:0,60,1138	1/1:1,25:26:62.58:455,63,0	1/1:3,13:16:47.94:423,48,0	1/1:2,10:12:35.89:289,36,0	1/1:0,11:11:33.06:329,33,0	1/1:0,17:17:50.86:411,51,0	1/1:4,15:19:49.97:468,50,0	1/1:2,20:21:59.53:453,60,0	1/1:0,16:16:47.94:406,48,0	1/1:0,21:21:62.84:516,63,0	1/1:2,14:16:44.52:354,45,0	0/0:26,0:26:78.25:0,78,1508	1/1:1,18:19:53.80:484,54,0	1/1:0,10:10:28.48:229,28,0	1/1:0,6:6:18.01:163,18,0	1/1:2,12:13:34.88:336,35,0	1/1:2,19:21:59.32:463,59,0	1/1:0,9:8:20.82:199,21,0	1/1:2,8:10:28.46:215,28,0	1/1:2,20:22:59.37:432,59,0	1/1:1,5:6:11.95:103,12,0	1/1:0,13:13:38.94:328,39,0	1/1:1,14:15:44.91:403,45,0	1/1:1,23:24:68.86:636,69,0	1/1:0,7:7:18.02:170,18,0
chr10	33854796	.	C	CCTT	11712.37	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=12.716;DP=442;FS=5.607;HRun=0;HaplotypeScore=201.7748;InbreedingCoeff=0.9766;MQ=81.63;MQ0=4;MQRankSum=-12.561;QD=30.99;ReadPosRankSum=5.556;VQSLOD=4.7222;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,15:16:45.11:482,45,0	1/1:0,9:9:27.07:300,27,0	0/0:20,0:20:60.21:0,60,1064	0/0:20,0:20:60.19:0,60,990	1/1:3,24:27:68.49:633,68,0	1/1:1,13:14:42.12:491,42,0	1/1:0,10:10:30.08:326,30,0	1/1:2,11:13:35.14:442,35,0	1/1:0,17:17:48.13:534,48,0	1/1:2,16:18:51.14:658,51,0	1/1:3,20:22:63.08:640,63,0	1/1:0,16:16:48.13:536,48,0	1/1:0,21:21:63.17:690,63,0	1/1:2,14:17:50.78:524,51,0	0/0:24,0:24:72.23:0,72,1309	1/1:2,18:20:57.11:644,57,0	1/1:0,10:10:27.07:292,27,0	1/1:0,6:6:18.06:224,18,0	1/1:1,12:12:33.11:441,33,0	1/1:2,19:21:57.07:597,57,0	1/1:1,9:9:19.56:211,20,0	1/1:2,8:10:26.65:263,27,0	1/1:2,20:22:60.09:598,60,0	1/1:0,5:5:10.72:95,11,0	1/1:0,13:13:39.11:436,39,0	1/1:2,14:15:45.12:545,45,0	1/1:1,23:23:72.19:881,72,0	1/1:0,7:7:18.06:227,18,0
chr10	33854798	.	T	TAC	19132.68	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=12.216;DP=535;FS=7.421;HRun=0;HaplotypeScore=211.1338;InbreedingCoeff=0.9770;MQ=75.44;MQ0=4;MQRankSum=-12.727;QD=40.62;ReadPosRankSum=4.002;VQSLOD=4.6125;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,15:20:48.16:698,48,0	1/1:2,9:11:27.09:394,27,0	0/0:21,0:21:63.21:0,63,962	0/0:19,0:19:57.16:0,57,835	1/1:5,24:30:75.24:1068,75,0	1/1:7,13:20:51.17:766,51,0	1/1:1,10:11:30.10:445,30,0	1/1:12,11:23:63.20:993,63,0	1/1:3,17:20:57.19:860,57,0	1/1:5,16:21:60.20:948,60,0	1/1:7,20:26:75.25:1104,75,0	1/1:1,16:17:51.17:766,51,0	1/1:4,21:25:75.25:1134,75,0	1/1:6,15:21:60.20:920,60,0	0/0:24,0:24:72.23:0,72,1146	1/1:3,18:21:63.21:974,63,0	1/1:4,10:14:36.12:527,36,0	1/1:3,6:9:27.09:417,27,0	1/1:5,12:16:45.15:697,45,0	1/1:7,19:26:72.24:1062,72,0	1/1:8,7:15:39.06:535,39,0	1/1:5,8:14:30.10:463,30,0	1/1:8,20:28:69.23:1004,69,0	1/1:1,5:6:8.86:130,9,0	1/1:4,13:17:48.16:735,48,0	1/1:8,14:20:62.58:947,63,0	1/1:4,22:25:75.25:1172,75,0	1/1:2,7:9:24.08:374,24,0
chr10	33855646	.	TG	T	892.10	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.635;DP=710;FS=8.914;HRun=5;HaplotypeScore=98.6428;InbreedingCoeff=0.9979;MQ=87.34;MQ0=0;MQRankSum=-2.332;QD=27.88;ReadPosRankSum=3.295;VQSLOD=3.4482;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,132,1788	0/0:8,0:8:24.08:0,24,328	0/0:25,0:25:72.23:0,72,956	0/0:24,0:24:63.17:0,63,820	0/0:22,0:22:57.18:0,57,764	0/0:18,0:18:48.16:0,48,656	0/0:22,0:22:63.21:0,63,862	0/0:29,0:29:84.28:0,84,1149	0/0:33,0:33:96.31:0,96,1299	0/0:22,0:22:63.21:0,63,862	0/0:30,0:30:87.29:0,87,1188	0/0:32,0:32:93.26:0,93,1222	0/0:24,0:24:72.24:0,72,984	0/0:23,0:23:69.23:0,69,944	1/1:1,31:32:87.25:987,87,0	0/0:33,0:32:96.31:0,96,1297	0/0:27,0:27:78.25:0,78,1051	0/0:20,0:20:54.18:0,54,739	0/0:28,0:28:84.26:0,84,1131	0/0:21,0:21:63.21:0,63,860	0/0:29,0:29:81.27:0,81,1108	0/0:22,0:22:63.21:0,63,860	0/0:17,0:17:51.17:0,51,698	0/0:26,0:26:75.25:0,75,1022	0/0:23,0:23:69.23:0,69,944	0/0:36,0:36:99:0,105,1420	0/0:27,0:27:78.26:0,78,1064	0/0:13,0:13:39.12:0,39,520
chr10	33856899	.	GT	G	20862.37	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=6.808;DP=690;FS=0.527;HRun=4;HaplotypeScore=122.2925;InbreedingCoeff=0.9998;MQ=80.23;MQ0=1;MQRankSum=-11.085;QD=32.85;ReadPosRankSum=6.533;VQSLOD=3.2744;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,27:28:72.22:864,72,0	1/1:0,11:11:33.10:396,33,0	0/0:35,0:35:98.72:0,99,1288	0/0:20,0:19:57.16:0,57,762	1/1:2,30:32:93.28:1108,93,0	1/1:0,23:23:63.19:756,63,0	1/1:3,18:21:48.15:574,48,0	1/1:1,27:28:81.24:960,81,0	1/1:2,20:22:54.16:648,54,0	1/1:1,30:31:90.23:1053,90,0	1/1:0,21:21:63.19:755,63,0	1/1:2,30:32:87.27:1043,87,0	1/1:0,26:26:75.23:900,75,0	1/1:1,17:18:51.16:612,51,0	1/1:0,17:17:51.16:612,51,0	1/1:1,22:23:66.20:792,66,0	1/1:1,20:21:54.16:647,54,0	1/1:2,22:24:50.99:611,51,0	1/1:0,15:15:42.13:504,42,0	1/1:0,26:26:72.22:864,72,0	1/1:2,25:27:75.23:900,75,0	1/1:2,27:29:78.24:929,78,0	1/1:1,26:27:78.24:936,78,0	1/1:0,27:27:75.23:899,75,0	1/1:1,22:23:63.19:756,63,0	1/1:0,32:32:93.25:1090,93,0	1/1:2,32:34:87.27:1044,87,0	1/1:0,17:17:51.16:612,51,0
chr10	33857785	.	G	GCCCACTCCA	52754.54	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-8.017;DP=654;FS=6.681;HRun=0;HaplotypeScore=155.3927;InbreedingCoeff=0.7895;MQ=80.12;MQ0=0;MQRankSum=-10.438;QD=87.78;ReadPosRankSum=5.488;VQSLOD=4.8104;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,22:43:71.30:3295,71,0	1/1:1,9:10:30.10:1426,30,0	0/0:27,0:27:72.24:0,72,1861	0/0:26,0:26:63.22:0,63,1724	1/1:8,13:29:29.97:1320,30,0	1/1:6,13:23:39.13:1737,39,0	1/1:7,10:23:42.14:1905,42,0	1/1:11,10:29:72.25:2915,72,0	1/1:7,17:30:72.25:3430,72,0	1/1:10,17:29:66.23:3079,66,0	1/1:7,11:23:39.13:1597,39,0	1/1:4,24:33:81.28:3908,81,0	1/1:5,9:23:41.98:1929,42,0	1/1:7,12:25:57.20:2526,57,0	1/1:7,24:34:93.03:4124,93,0	1/1:6,17:27:63.22:2900,63,0	1/1:5,10:22:33.11:1508,33,0	1/1:3,3:10:18.06:740,18,0	1/1:6,5:23:56.73:1818,57,0	1/1:4,13:22:42.14:1722,42,0	1/1:8,6:22:9.48:441,9,0	1/1:4,16:24:45.11:1842,45,0	1/1:5,5:12:11.74:541,12,0	1/1:3,7:15:1.16:713,1,0	1/1:2,13:20:39.13:1758,39,0	1/1:2,12:21:53.90:2269,54,0	1/1:7,17:28:71.95:3252,72,0	1/1:1,0:1:3.01:59,3,0
chr10	33858268	.	AGATAGATAGATAGATAGATGTG	A	8917.15	PASS	AB=1.000;AC=30;AF=0.536;AN=56;BaseQRankSum=-3.898;DP=634;FS=3.111;HRun=0;HaplotypeScore=289.4757;InbreedingCoeff=0.0503;MQ=55.47;MQ0=12;MQRankSum=0.667;QD=16.95;ReadPosRankSum=2.514;VQSLOD=3.0587;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:15:5.36:23,5,0	0/0:14,0:14:3.48:0,3,70	0/0:6,0:5:15.05:0,15,378	0/0:5,0:2:5.99:0,6,97	0/0:25,0:25:7.75:0,8,254	1/1:0,24:24:6.02:369,6,0	1/1:15,0:14:30.10:613,30,0	1/1:32,0:21:62.93:997,63,0	0/1:25,0:25:11.22:11,0,378	0/1:33,0:31:99:1175,0,679	0/0:22,0:22:15.05:0,15,450	1/1:34,0:34:2.68:12,3,0	1/1:30,0:30:14.83:428,15,0	1/1:24,0:24:18.06:530,18,0	0/0:25,0:25:18.06:0,18,467	0/1:23,0:23:87.97:169,0,88	0/1:22,0:20:99:506,0,1420	0/1:21,0:19:99:728,0,151	1/1:17,0:16:44.05:714,44,0	0/1:35,0:34:86.69:87,0,542	1/1:23,0:21:35.99:716,36,0	0/1:28,0:28:18.89:85,0,19	0/1:36,0:36:15.75:16,0,147	0/1:15,0:12:99:473,0,159	0/1:31,0:31:67.32:316,0,67	0/1:23,0:23:99:945,0,118	0/1:19,0:17:6.26:6,0,383	0/0:11,0:10:18.06:0,18,565
chr10	33858272	.	AGATAGATAGATAGATGTG	A	11990.70	PASS	AB=1.000;AC=34;AF=0.607;AN=56;BaseQRankSum=-5.568;DP=613;FS=6.189;HRun=0;HaplotypeScore=233.8843;InbreedingCoeff=0.2509;MQ=56.71;MQ0=11;MQRankSum=-0.007;QD=23.89;ReadPosRankSum=3.544;VQSLOD=2.8420;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:15:6.02:127,6,0	0/0:14,0:14:3.37:0,3,18	0/0:9,0:8:24.08:0,24,627	0/0:6,0:3:9:0,9,167	0/0:27,0:27:7.64:0,8,92	1/1:24,0:24:6.02:279,6,0	1/1:15,0:14:30.10:638,30,0	1/1:36,0:26:77.99:1277,78,0	0/1:26,0:26:99:167,0,118	0/1:35,0:33:99:1400,0,258	0/0:21,0:21:11.87:0,12,192	1/1:33,0:33:3.01:63,3,0	1/1:0,25:25:15:705,15,0	1/1:0,23:23:18.06:945,18,0	0/0:24,0:24:11.83:0,12,150	1/1:1,16:17:5.14:319,5,0	0/1:23,0:21:99:566,0,1008	0/1:22,0:20:21.48:909,0,21	1/1:18,0:17:48.16:978,48,0	0/1:34,0:33:90.20:90,0,167	1/1:19,0:17:36.12:765,36,0	1/1:0,22:22:3.01:160,3,0	0/1:35,0:35:32.26:268,0,32	0/1:15,0:12:40.78:476,0,41	1/1:1,24:25:14.94:627,15,0	1/1:1,19:20:37.79:1175,38,0	0/1:19,0:17:58.31:58,0,162	0/0:10,0:9:14.94:0,15,200
chr10	33858276	.	AGATAGATAGATGTG	A	13660.27	PASS	AB=1.000;AC=48;AF=0.857;AN=56;BaseQRankSum=0.130;DP=593;FS=3.841;HRun=0;HaplotypeScore=190.0023;InbreedingCoeff=0.2085;MQ=57.80;MQ0=11;MQRankSum=-3.951;QD=23.67;ReadPosRankSum=5.259;VQSLOD=3.3394;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:1,14:15:6.02:265,6,0	1/1:15,0:15:5.28:84,5,0	0/0:10,0:9:27.09:0,27,719	0/0:6,0:3:9:0,9,167	1/1:26,0:26:6.86:59,7,0	1/1:24,0:24:6.02:223,6,0	1/1:16,0:15:33.11:701,33,0	1/1:40,0:30:89.96:1520,90,0	1/1:19,3:22:21.05:530,21,0	0/1:33,0:31:24.24:1519,0,24	0/1:20,0:20:15.88:61,0,16	1/1:0,31:31:3.01:132,3,0	1/1:25,0:25:14.79:524,15,0	1/1:23,0:23:18.06:674,18,0	1/1:22,0:22:6.02:72,6,0	1/1:17,0:17:5.05:229,5,0	0/1:23,0:21:99:626,0,581	1/1:21,0:19:47.41:1090,47,0	1/1:0,18:18:51.14:1206,51,0	0/1:36,0:35:25.26:267,0,25	1/1:23,0:21:39.13:829,39,0	1/1:22,0:22:3.01:115,3,0	1/1:0,28:28:14.53:631,15,0	1/1:13,0:10:24.06:503,24,0	1/1:25,0:25:15.05:495,15,0	1/1:20,0:20:54.07:1137,54,0	1/1:0,13:13:3.01:132,3,0	1/1:6,0:5:3.01:36,3,0
chr10	33858280	.	AGATAGATGTG	A	14114.30	PASS	AB=1.000;AC=51;AF=0.911;AN=56;BaseQRankSum=1.644;DP=591;FS=7.519;HRun=0;HaplotypeScore=162.7918;InbreedingCoeff=0.4253;MQ=60.87;MQ0=11;MQRankSum=-4.831;QD=24.72;ReadPosRankSum=4.892;VQSLOD=3.0227;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:15:6.02:175,6,0	1/1:0,15:15:5.48:154,5,0	0/0:11,0:10:30.10:0,30,807	0/0:9,0:6:18.03:0,18,407	1/1:0,25:25:6.91:196,7,0	1/1:24,0:24:6.02:167,6,0	1/1:17,0:16:36.12:758,36,0	1/1:39,0:31:93:1584,93,0	1/1:3,20:23:21.07:669,21,0	1/1:2,30:30:87.27:1796,87,0	1/1:0,21:21:6.02:207,6,0	1/1:31,0:31:3.01:88,3,0	1/1:25,0:25:14.78:412,15,0	1/1:23,0:23:18.06:507,18,0	1/1:0,21:21:6.02:209,6,0	1/1:17,0:17:5.87:174,6,0	0/1:22,0:20:99:721,0,242	1/1:19,0:17:51.18:1038,51,0	1/1:18,0:18:51.14:1072,51,0	1/1:1,32:32:21.07:635,21,0	1/1:24,0:22:39.13:829,39,0	1/1:22,0:22:3.01:87,3,0	1/1:28,0:28:14.63:407,15,0	1/1:13,0:10:24.08:503,24,0	1/1:25,0:25:15.05:387,15,0	1/1:19,1:20:54.06:1150,54,0	1/1:13,0:11:3.01:88,3,0	1/1:1,5:5:3.01:105,3,0
chr10	33858284	.	AGATGTG	A	12246.82	PASS	AB=1.000;AC=51;AF=0.911;AN=56;BaseQRankSum=2.670;DP=589;FS=6.738;HRun=0;HaplotypeScore=149.8112;InbreedingCoeff=0.4268;MQ=64.46;MQ0=6;MQRankSum=-6.238;QD=21.79;ReadPosRankSum=5.606;VQSLOD=3.9731;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:15:6.02:119,6,0	1/1:15,0:15:5.27:109,5,0	0/0:16,0:15:45.15:0,45,1173	0/0:11,0:8:24.05:0,24,537	1/1:25,0:25:6.91:118,7,0	1/1:24,0:24:6.02:111,6,0	1/1:16,0:16:36.12:758,36,0	1/1:2,34:34:99:1634,99,0	1/1:23,0:23:21.07:415,21,0	1/1:31,0:30:84.27:1684,84,0	1/1:21,0:21:6.02:119,6,0	1/1:31,0:31:2.85:59,3,0	1/1:25,0:25:14.91:301,15,0	1/1:23,0:23:18.06:352,18,0	1/1:21,0:21:6.02:120,6,0	1/1:17,0:17:5.97:118,6,0	0/1:18,0:16:49.34:655,0,49	1/1:19,0:17:51.18:1038,51,0	1/1:18,0:18:51.14:988,51,0	1/1:33,0:32:21.07:412,21,0	1/1:25,0:23:39.12:829,39,0	1/1:22,0:22:3.01:59,3,0	1/1:28,0:28:14.49:278,14,0	1/1:13,0:10:24.08:503,24,0	1/1:25,0:25:15.05:300,15,0	1/1:20,0:20:54.17:1049,54,0	1/1:13,0:11:3.01:60,3,0	1/1:5,0:5:3.01:60,3,0
chr10	33858286	.	ATG	A	6635.59	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=4.823;DP=594;FS=8.214;HRun=0;HaplotypeScore=150.3109;InbreedingCoeff=0.5227;MQ=66.12;MQ0=6;MQRankSum=-7.498;QD=11.79;ReadPosRankSum=5.723;VQSLOD=4.0923;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:15:5.85:34,6,0	1/1:15,0:15:5.65:49,6,0	0/0:18,0:17:51.04:0,51,813	0/0:13,0:10:27.08:0,27,429	1/1:25,0:25:6:63,6,0	1/1:24,0:24:5.50:26,5,0	1/1:0,16:16:36.12:465,36,0	1/1:36,0:33:72.19:911,72,0	1/1:23,0:23:20.65:150,21,0	1/1:31,0:30:81.23:1013,81,0	1/1:21,0:21:5.98:53,6,0	1/1:31,0:31:2.92:17,3,0	1/1:25,0:25:14.64:107,15,0	1/1:23,0:23:17.63:123,18,0	1/1:21,0:21:5.88:35,6,0	1/1:16,1:17:5.61:34,6,0	1/1:2,15:15:35.91:466,36,0	1/1:1,19:19:51.17:660,51,0	1/1:18,0:18:47.83:552,48,0	1/1:33,0:32:20.86:195,21,0	1/1:1,25:24:39.13:504,39,0	1/1:22,0:22:2.92:17,3,0	1/1:28,0:28:13.52:116,14,0	1/1:0,13:10:24.08:310,24,0	1/1:24,1:25:14.79:128,15,0	1/1:20,0:20:50.82:573,51,0	1/1:13,0:11:2.90:16,3,0	1/1:5,0:5:2.92:17,3,0
chr10	33859648	.	G	GTTTT	34039.88	PASS	AB=0.520;AC=51;AF=0.911;AN=56;BaseQRankSum=-9.093;DP=759;FS=1.196;HRun=3;HaplotypeScore=86.7739;InbreedingCoeff=0.8022;MQ=66.87;MQ0=1;MQRankSum=-5.514;QD=48.42;ReadPosRankSum=5.364;VQSLOD=3.2186;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,35:45:75.26:2023,75,0	1/1:1,11:12:27.09:705,27,0	0/0:30,0:28:78.16:0,78,1009	0/0:26,0:25:57.10:0,57,746	1/1:0,25:28:77.97:1510,78,0	1/1:0,21:22:39.13:1050,39,0	1/1:0,24:25:42.14:1131,42,0	1/1:0,20:23:69.01:923,69,0	1/1:0,14:15:27.09:729,27,0	1/1:2,35:40:99:2330,111,0	1/1:0,24:27:71.84:1434,72,0	1/1:3,26:32:42.14:1126,42,0	1/1:0,30:32:54.19:1457,54,0	1/1:4,14:18:27.09:728,27,0	1/1:16,22:37:99:2188,99,0	1/1:1,31:34:59.88:1618,60,0	1/1:0,37:40:66.23:1751,66,0	1/1:2,16:20:27.56:729,28,0	1/1:2,30:34:96.14:1609,96,0	1/1:0,25:25:65.48:1203,65,0	1/1:0,30:30:57.20:1538,57,0	1/1:2,19:22:54.06:1267,54,0	1/1:2,12:15:24.08:648,24,0	1/1:1,27:33:54.19:1457,54,0	0/1:1,11:13:8.23:699,0,8	1/1:3,26:33:87.18:1842,87,0	1/1:2,24:29:51.18:1375,51,0	1/1:3,14:17:36.12:971,36,0
chr10	33859673	.	CT	C	741.44	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.838;DP=730;FS=2.388;HRun=7;HaplotypeScore=168.9979;InbreedingCoeff=0.9974;MQ=69.27;MQ0=2;MQRankSum=-0.185;QD=21.18;ReadPosRankSum=1.247;VQSLOD=1.7790;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,108,1301	0/0:11,0:11:24.08:0,24,302	0/0:29,0:25:66.18:0,66,791	0/0:27,0:26:59.51:0,60,733	0/0:25,1:26:32.99:0,33,710	0/0:24,0:24:63.16:0,63,764	0/0:24,0:24:63.20:0,63,792	0/0:20,0:20:54.64:0,55,680	0/0:19,0:19:48.15:0,48,603	0/0:39,0:39:99:0,102,1281	0/0:25,0:25:59.36:0,59,706	0/0:22,0:22:57.18:0,57,716	0/0:26,0:26:66.18:0,66,793	0/0:29,0:28:75.22:0,75,922	1/1:6,29:34:86.36:836,86,0	0/0:34,0:34:87.28:0,87,1091	0/0:37,0:37:90.27:0,90,1116	0/0:23,0:23:53.65:0,54,660	0/0:22,0:22:60.19:0,60,755	0/0:21,0:21:63.19:0,63,779	0/0:29,0:29:72.18:0,72,892	0/0:21,0:21:48.14:0,48,590	0/0:14,0:14:33.11:0,33,415	0/0:29,0:29:66.19:0,66,816	0/0:17,0:17:48.15:0,48,604	0/0:34,0:34:93.30:0,93,1168	0/0:35,0:35:89.98:0,90,1118	0/0:13,0:13:39.12:0,39,491
chr10	33860029	.	CTAAG	C	841.68	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.196;DP=427;FS=0.000;HRun=0;HaplotypeScore=81.7593;InbreedingCoeff=0.8947;MQ=84.01;MQ0=0;MQRankSum=-2.991;QD=46.76;ReadPosRankSum=1.261;VQSLOD=3.8221;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:60.21:0,60,1641	0/0:2,0:2:6.02:0,6,168	0/0:11,0:11:33.11:0,33,818	0/0:17,0:16:40.81:0,41,1035	0/0:14,0:14:42.14:0,42,1173	0/0:18,0:18:54.19:0,54,1452	0/0:10,0:10:30.10:0,30,840	0/0:36,0:36:99:0,102,2652	0/0:17,0:17:51.17:0,51,1381	0/0:18,0:18:54.19:0,54,1454	0/0:17,0:17:48.16:0,48,1297	0/0:13,0:13:39.13:0,39,1091	0/0:13,0:13:39.13:0,39,1091	0/0:15,0:15:42.14:0,42,1076	1/1:0,18:18:48.16:936,48,0	0/0:10,0:10:30.10:0,30,839	0/0:21,0:21:63.22:0,63,1713	0/0:10,0:10:30.02:0,30,772	0/0:11,0:11:30.09:0,30,781	0/0:21,0:21:60.21:0,60,1601	0/0:17,0:17:51.18:0,51,1402	0/0:6,0:6:18.06:0,18,481	0/0:12,0:12:36.12:0,36,1000	0/0:8,0:8:24.08:0,24,672	0/0:11,0:11:33.11:0,33,923	0/0:24,0:24:72.25:0,72,2015	0/0:17,0:17:51.18:0,51,1422	0/0:20,0:20:60.21:0,60,1533
chr10	33861040	.	CCTGACCCTTCAT	C	8140.66	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=9.418;DP=736;FS=0.446;HRun=0;HaplotypeScore=344.5347;InbreedingCoeff=0.9996;MQ=86.56;MQ0=0;MQRankSum=-13.862;QD=79.04;ReadPosRankSum=0.014;VQSLOD=3.9058;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:59,0:59:99:0,175,10518	0/0:11,0:11:30.10:0,30,1849	0/0:29,0:29:72.19:0,72,3692	0/0:26,0:26:65.21:0,65,3071	1/1:4,23:27:69.24:2436,69,0	1/1:6,9:15:27.09:1008,27,0	1/1:5,16:21:36.12:1339,36,0	0/0:40,0:40:99:0,99,5625	1/1:3,19:22:51.18:1903,51,0	0/0:31,0:31:93.32:0,93,5528	0/0:16,0:16:48.16:0,48,2891	0/0:26,0:26:75.26:0,75,4476	0/0:28,0:28:84.29:0,84,4873	0/0:27,0:27:78.25:0,78,4356	0/0:39,0:39:99:0,108,6208	0/0:21,0:21:57.20:0,57,3499	1/1:3,15:18:39.13:1455,39,0	0/0:15,0:15:45.15:0,45,2540	0/0:24,0:24:69.22:0,69,3492	0/0:38,0:38:99:0,114,6773	0/0:27,0:27:81.28:0,81,4437	0/0:20,0:20:60.21:0,60,3412	0/0:21,0:21:63.22:0,63,3843	0/0:25,0:25:69.71:0,70,4123	0/0:41,0:41:99:0,117,6977	0/0:25,0:25:72.25:0,72,4240	0/0:30,0:29:90.31:0,90,5476	0/0:14,0:14:36.11:0,36,1879
chr10	33863067	.	G	GAA	8075.03	PASS	AB=0.988;AC=44;AF=0.786;AN=56;BaseQRankSum=4.404;DP=554;FS=24.138;HRun=1;HaplotypeScore=155.5145;InbreedingCoeff=0.1226;MQ=67.38;MQ0=10;MQRankSum=-1.325;QD=16.51;ReadPosRankSum=8.226;VQSLOD=0.1078;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:37,1:37:5.98:534,0,6	1/1:5,0:5:11.96:96,12,0	0/0:31,0:21:46.28:0,46,485	0/0:34,0:19:44.84:0,45,427	1/1:9,1:10:24.02:244,24,0	1/1:22,0:22:52.27:461,52,0	1/1:21,1:22:46.93:452,47,0	1/1:27,0:27:26.91:581,27,0	0/1:23,2:25:34.37:393,0,34	1/1:26,0:22:46.69:503,47,0	1/1:15,0:14:26.90:225,27,0	1/1:18,0:18:44.41:297,44,0	1/1:17,0:17:40.30:352,40,0	1/1:23,0:23:5.74:314,6,0	1/1:23,0:23:63.56:534,64,0	0/1:27,0:27:29.50:351,0,29	1/1:3,24:26:6.45:163,6,0	0/1:19,0:19:60.55:205,0,61	0/1:18,0:18:91.13:225,0,91	1/1:18,0:18:27.21:368,27,0	0/1:22,0:20:24.90:278,0,25	0/1:9,0:9:17.93:140,0,18	1/1:7,0:7:17.92:142,18,0	1/1:13,0:13:25.49:204,25,0	1/1:13,0:13:11.01:248,11,0	0/1:24,0:24:51.07:393,0,51	1/1:17,0:17:34.35:326,34,0	1/1:4,0:3:5.99:50,6,0
chr10	33863097	.	GAGAGAGAGAGAGAGAGAGAGAGAA	G	1674.08	PASS	AB=1.000;AC=7;AF=0.130;AN=54;BaseQRankSum=6.648;DP=490;FS=0.000;HRun=0;HaplotypeScore=333.7459;InbreedingCoeff=0.7878;MQ=48.89;MQ0=15;MQRankSum=-5.532;QD=30.44;ReadPosRankSum=-0.586;VQSLOD=1.4763;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:40:87.06:0,87,4721	0/0:3,0:3:9.03:0,9,516	0/0:17,0:4:12.04:0,12,171	0/0:25,0:7:20.85:0,21,203	0/0:10,0:10:30.03:0,30,872	0/0:20,0:20:45.09:0,45,1619	0/0:26,0:26:60.15:0,60,2453	0/0:21,0:20:59.66:0,60,1263	0/0:28,0:28:61.78:0,62,4455	0/0:18,0:15:42.11:0,42,1627	0/0:12,0:11:16.27:0,16,671	1/1:16,5:21:59.44:1417,59,0	0/0:16,0:16:22.90:0,23,1383	0/0:19,0:19:36.05:0,36,2124	0/1:17,0:17:99:121,0,269	0/0:27,0:27:72.24:0,72,4800	0/0:22,0:21:23.44:0,23,1422	0/0:17,0:17:50.80:0,51,3180	0/0:17,0:16:47.76:0,48,2700	0/0:15,0:15:35.86:0,36,1098	0/0:21,0:19:45.10:0,45,2215	0/0:11,0:11:30.06:0,30,1390	1/1:5,1:6:11.93:153,12,0	1/1:10,1:11:14.23:125,14,0	0/0:16,0:15:39.05:0,39,1387	0/0:18,0:18:53.77:0,54,2804	0/0:12,0:12:28.10:0,28,1075	./.
chr10	33863119	.	GAA	G	681.76	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=8.442;DP=478;FS=1.246;HRun=2;HaplotypeScore=158.2388;InbreedingCoeff=0.7489;MQ=69.67;MQ0=10;MQRankSum=-7.612;QD=10.03;ReadPosRankSum=2.788;VQSLOD=0.7665;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:33:78.63:0,79,615	0/0:4,0:4:11.95:0,12,95	0/0:29,0:19:54.06:0,54,553	0/0:36,0:18:37.09:0,37,416	0/0:16,0:16:44.87:0,45,362	0/0:16,0:16:33.44:0,33,279	0/0:28,0:28:71.75:0,72,613	0/0:20,0:19:50.96:0,51,430	0/0:28,0:28:59.69:0,60,516	0/0:9,0:7:17.07:0,17,167	0/0:10,0:10:21.45:0,21,175	1/1:22,2:24:68.34:497,68,0	0/0:16,0:16:0.21:0,0,241	0/0:11,0:11:16.71:0,17,208	0/0:14,0:14:39.38:0,39,294	0/1:22,0:22:10.18:10,0,320	0/0:12,0:12:31.48:0,31,269	0/0:10,0:10:29.11:0,29,248	0/0:20,0:19:54.01:0,54,491	0/0:16,0:16:44.61:0,45,328	0/0:18,0:17:47.85:0,48,398	0/0:15,0:15:41.83:0,42,334	1/1:5,1:6:11.88:83,12,0	1/1:12,4:16:31.34:235,31,0	0/0:12,0:11:32.91:0,33,274	0/0:15,0:15:36.96:0,37,351	0/0:16,0:16:44.14:0,44,353	0/0:4,0:4:11.93:0,12,90
chr10	33863126	.	G	GA	16408.21	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=2.647;DP=510;FS=0.000;HRun=1;HaplotypeScore=102.4166;InbreedingCoeff=0.9632;MQ=78.46;MQ0=8;MQRankSum=-7.371;QD=37.72;ReadPosRankSum=3.718;VQSLOD=4.9441;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,27:27:72.24:1079,72,0	1/1:0,6:6:15.05:225,15,0	0/0:35,0:25:54.57:0,55,877	0/0:40,0:22:57.04:0,57,663	1/1:0,18:18:51.09:739,51,0	1/1:0,13:13:36.12:540,36,0	1/1:2,23:25:66.11:937,66,0	1/1:2,21:23:62.97:925,63,0	1/1:2,24:26:63.21:943,63,0	1/1:0,10:9:24.08:359,24,0	1/1:0,9:9:21.07:315,21,0	1/1:1,29:30:78.22:1127,78,0	1/1:4,13:17:42.10:604,42,0	1/1:0,12:12:30.10:449,30,0	1/1:1,15:16:45.15:669,45,0	1/1:1,19:20:60.15:871,60,0	1/1:1,10:11:24.08:360,24,0	1/1:0,13:13:36.12:537,36,0	1/1:2,20:21:24.22:815,24,0	1/1:2,17:19:45.12:649,45,0	1/1:3,20:22:54.18:809,54,0	1/1:0,17:17:39.13:585,39,0	1/1:0,9:9:15.05:224,15,0	1/1:1,17:18:42.99:606,43,0	1/1:1,11:12:33.11:494,33,0	1/1:2,16:18:48.12:695,48,0	1/1:0,16:16:45.15:674,45,0	1/1:0,4:4:12.04:180,12,0
chr10	33863291	.	CT	C	9878.25	PASS	AB=1.000;AC=53;AF=0.946;AN=56;BaseQRankSum=-1.179;DP=555;FS=13.122;HRun=11;HaplotypeScore=102.5728;InbreedingCoeff=0.7139;MQ=74.02;MQ0=0;MQRankSum=-5.225;QD=18.43;ReadPosRankSum=6.027;VQSLOD=4.1964;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,20:24:55.96:449,56,0	1/1:3,7:10:20.96:172,21,0	0/0:18,1:17:6.96:0,7,249	0/1:11,0:11:2.79:3,0,112	1/1:5,31:36:63.89:732,64,0	1/1:2,9:11:20.96:172,21,0	1/1:1,14:15:32.94:271,33,0	1/1:5,29:34:54.87:652,55,0	1/1:7,15:22:32.95:271,33,0	1/1:4,22:26:62.89:515,63,0	1/1:3,32:36:94.90:769,95,0	1/1:4,19:23:24.93:411,25,0	1/1:4,12:16:38.95:320,39,0	1/1:0,15:15:35.96:295,36,0	1/1:7,8:15:29.88:239,30,0	1/1:1,17:17:44.95:369,45,0	1/1:1,9:10:26.97:222,27,0	1/1:2,14:16:38.94:320,39,0	1/1:6,5:11:17.94:145,18,0	1/1:1,22:24:61.94:499,62,0	1/1:6,11:17:29.95:246,30,0	1/1:3,20:24:33.21:423,33,0	1/1:3,20:24:58.97:474,59,0	1/1:1,8:11:25.05:184,25,0	1/1:4,20:25:61.96:499,62,0	1/1:3,27:30:74.87:611,75,0	1/1:3,17:20:47.93:394,48,0	1/1:1,11:12:26.94:222,27,0
chr10	33863401	.	GAT	G	3467.86	PASS	AB=0.723;AC=28;AF=0.500;AN=56;BaseQRankSum=4.787;DP=484;FS=4.223;HRun=0;HaplotypeScore=163.4200;InbreedingCoeff=0.2089;MQ=42.30;MQ0=44;MQRankSum=-6.615;QD=11.96;ReadPosRankSum=5.718;VQSLOD=3.4400;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:10,4:9:0:0,0,0	1/1:1,8:9:3.95:43,4,0	0/0:15,0:1:3.01:0,3,43	0/0:24,0:7:2.57:0,3,21	0/0:12,16:25:8.81:0,9,97	1/1:6,4:10:6.49:82,6,0	1/1:8,5:9:0.86:2,1,0	1/1:56,1:50:99:1642,123,0	0/1:13,2:15:22.29:22,0,145	0/1:10,12:18:31.05:390,0,31	0/0:6,18:23:2.18:0,2,9	1/1:8,12:19:9.07:100,9,0	0/1:7,7:13:99:130,0,105	1/1:9,7:15:2.66:40,3,0	0/0:7,10:14:10.77:0,11,106	0/0:5,7:11:6:0,6,52	1/1:1,7:7:5.75:82,6,0	0/1:6,0:6:16.44:33,0,16	1/1:4,5:7:5.06:223,5,0	0/0:8,21:26:7.56:0,8,38	0/1:1,3:3:0:0,0,0	0/0:7,0:5:6.01:0,6,74	1/1:6,11:13:3.01:42,3,0	0/0:5,0:5:6.02:0,6,85	0/0:14,15:28:13.64:0,14,143	0/1:8,10:15:20.02:380,0,20	0/1:8,13:18:37.69:254,0,38	1/1:13,0:13:0.47:1,0,0
chr10	33863403	.	T	TAG	4033.23	PASS	AB=0.925;AC=27;AF=0.482;AN=56;BaseQRankSum=3.260;DP=494;FS=0.742;HRun=0;HaplotypeScore=175.7105;InbreedingCoeff=0.2390;MQ=44.85;MQ0=42;MQRankSum=-6.199;QD=12.64;ReadPosRankSum=4.426;VQSLOD=3.4713;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:15,0:10:0.01:0,0,0	1/1:10,0:9:3.01:42,3,0	0/0:15,0:1:3.01:0,3,39	0/1:25,0:10:24.84:25,0,36	0/0:26,0:23:3.38:0,3,25	1/1:8,2:10:6.02:82,6,0	0/0:13,0:9:0.56:0,1,2	1/1:54,0:51:99:1759,144,0	0/1:16,0:16:37.05:64,0,37	1/1:23,0:18:51.04:602,51,0	1/1:30,0:26:2.97:25,3,0	0/1:20,1:20:41.28:60,0,41	0/1:14,0:13:22.05:144,0,22	1/1:15,1:15:3.01:41,3,0	0/0:16,0:13:5.92:0,6,42	0/0:13,0:12:6:0,6,66	1/1:8,0:6:6.02:82,6,0	0/1:2,4:6:10.90:50,0,11	1/1:14,0:12:25.44:285,25,0	0/0:29,0:27:8.73:0,9,51	0/0:4,0:3:0.78:0,1,2	0/0:7,0:5:2.99:0,3,24	0/0:16,0:12:4.21:0,4,23	0/0:5,0:5:6.02:0,6,85	0/0:30,0:29:18.17:0,18,127	1/1:20,1:17:30.29:511,30,0	0/1:21,0:19:13.66:261,0,14	1/1:1,11:12:0.47:1,0,0
chr10	33863405	.	GAT	G	5084.07	PASS	AB=0.915;AC=47;AF=0.839;AN=56;BaseQRankSum=-2.231;DP=492;FS=6.686;HRun=0;HaplotypeScore=170.3024;InbreedingCoeff=0.3375;MQ=44.75;MQ0=41;MQRankSum=-1.114;QD=11.45;ReadPosRankSum=1.165;VQSLOD=4.3332;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:13,1:9:0:0,0,0	1/1:10,0:9:3.95:42,4,0	0/0:16,0:1:3.01:0,3,41	0/0:27,0:10:4.20:0,4,50	1/1:21,5:23:2.75:23,3,0	1/1:8,2:10:6.49:82,6,0	1/1:9,1:7:3.84:21,4,0	1/1:4,51:52:99:1954,150,0	1/1:12,4:16:11.99:113,12,0	1/1:19,4:18:48.12:605,48,0	1/1:26,4:26:2.84:25,3,0	1/1:21,0:20:9.06:100,9,0	1/1:13,0:12:16.50:224,17,0	1/1:12,4:15:2.66:40,3,0	1/1:13,3:13:3.01:43,3,0	0/1:10,3:12:18.91:19,0,23	1/1:8,0:6:5.75:82,6,0	1/1:6,0:6:8.99:94,9,0	1/1:14,0:12:21.05:263,21,0	1/1:26,2:26:9.97:132,10,0	0/1:4,0:3:0:0,0,0	1/1:6,1:5:2.87:24,3,0	1/1:15,2:13:3.01:42,3,0	0/0:5,0:5:6.02:0,6,89	1/1:24,8:30:15.04:197,15,0	1/1:18,3:17:43.02:571,43,0	1/1:20,2:19:27.07:347,27,0	1/1:12,0:12:3.01:39,3,0
chr10	33863407	.	T	TAG	4900.64	PASS	AB=1.000;AC=40;AF=0.714;AN=56;BaseQRankSum=-1.982;DP=496;FS=9.062;HRun=0;HaplotypeScore=175.0758;InbreedingCoeff=0.3856;MQ=44.71;MQ0=39;MQRankSum=-2.369;QD=13.43;ReadPosRankSum=2.829;VQSLOD=4.2660;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,2:11:0.68:1,1,0	1/1:10,0:9:3.01:41,3,0	0/0:17,0:2:6.02:0,6,83	0/0:28,0:11:1.45:0,1,72	1/1:24,2:23:2.68:48,3,0	1/1:11,0:11:6.02:82,6,0	1/1:9,0:6:1.18:16,1,0	1/1:57,0:55:99:1948,150,0	1/1:16,1:17:12.03:163,12,0	1/1:22,0:17:48.15:646,48,0	1/1:30,0:26:2.96:25,3,0	1/1:20,0:19:5.98:75,6,0	1/1:12,2:13:24:313,24,0	1/1:16,0:15:3.01:41,3,0	0/1:15,0:12:0:0,0,0	0/1:13,0:12:18.91:19,0,39	1/1:8,0:6:6.02:82,6,0	1/1:5,1:6:8.99:118,9,0	1/1:13,0:12:21.99:265,22,0	0/0:29,0:27:0.67:0,1,2	0/0:4,0:3:0.78:0,1,2	1/1:6,0:4:3.01:49,3,0	0/0:17,0:13:1.25:0,1,3	0/0:4,1:5:6.02:0,6,69	0/0:31,0:29:1.40:0,1,4	1/1:21,0:17:45.13:620,45,0	1/1:22,1:20:23.66:310,24,0	1/1:11,0:12:3.01:39,3,0
chr10	33863454	.	GTATATATA	G	15413.27	PASS	AC=50;AF=0.926;AN=54;BaseQRankSum=-2.191;DP=441;FS=2.356;HRun=0;HaplotypeScore=182.0336;InbreedingCoeff=0.5906;MQ=55.12;MQ0=1;MQRankSum=0.236;QD=38.92;ReadPosRankSum=0.301;VQSLOD=4.4203;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,21:25:24.55:637,25,0	1/1:2,4:6:15.45:341,15,0	0/0:12,0:7:5.66:0,6,68	0/0:23,0:15:4.92:0,5,28	1/1:3,25:28:28.81:773,29,0	1/1:4,9:13:18.45:476,18,0	1/1:5,6:11:19.82:425,20,0	1/1:22,8:30:48.11:963,48,0	1/1:0,11:11:27.98:719,28,0	1/1:2,18:19:48.10:1139,48,0	1/1:4,17:21:26.77:723,27,0	1/1:5,11:16:25.02:636,25,0	1/1:3,5:8:14.97:330,15,0	1/1:3,11:14:26.99:702,27,0	1/1:4,16:20:26.86:725,27,0	1/1:2,11:13:33.06:873,33,0	1/1:8,3:10:14.54:336,15,0	1/1:7,0:7:5.92:68,6,0	1/1:13,3:16:21.51:422,22,0	1/1:6,18:24:42.91:1127,43,0	1/1:2,9:11:3.69:83,4,0	1/1:0,9:9:2.97:80,3,0	1/1:2,9:11:12.04:314,12,0	./.	1/1:5,14:18:44.98:1150,45,0	1/1:10,7:17:42.03:838,42,0	1/1:4,22:26:54.13:1453,54,0	1/1:7,2:9:3.01:81,3,0
chr10	33864403	.	CATATATATATATATATATATATAT	C	5668.35	PASS	AB=0.669;AC=12;AF=0.231;AN=52;BaseQRankSum=2.617;DP=375;FS=9.853;HRun=0;HaplotypeScore=249.6758;InbreedingCoeff=0.5876;MQ=70.24;MQ0=3;MQRankSum=-6.374;QD=43.94;ReadPosRankSum=3.433;VQSLOD=2.1568;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:18.05:0,18,988	./.	1/1:12,0:6:1.55:4,2,0	0/0:31,0:19:27.76:0,28,514	1/1:9,19:28:32.67:1881,33,0	1/1:10,11:20:27.09:1715,27,0	1/1:7,6:13:3.01:190,3,0	0/0:32,0:32:54.18:0,54,2443	1/1:8,9:17:18.06:1143,18,0	0/0:10,0:10:24.08:0,24,1872	0/0:11,0:11:18.05:0,18,1304	0/0:3,0:3:3.01:0,3,91	0/0:9,0:9:21.07:0,21,1549	0/0:15,0:15:39.13:0,39,2811	0/1:10,0:17:92.16:364,0,92	0/0:9,0:9:15.05:0,15,694	0/1:9,11:20:99:372,0,110	0/0:16,0:16:30.10:0,30,2388	0/0:10,0:10:18.06:0,18,1525	0/0:11,0:11:15.05:0,15,811	0/0:8,0:8:15.03:0,15,777	0/0:10,0:10:15.05:0,15,504	./.	0/0:2,0:2:3.01:0,3,317	0/0:16,0:16:30.10:0,30,2620	0/0:9,0:8:12.02:0,12,507	0/0:13,0:13:15.03:0,15,950	0/0:9,0:8:6.02:0,6,537
chr10	33865478	.	A	AGC	6799.50	PASS	AB=0.991;AC=37;AF=0.661;AN=56;BaseQRankSum=-1.272;DP=638;FS=1.662;HRun=0;HaplotypeScore=157.2749;InbreedingCoeff=0.7556;MQ=57.99;MQ0=9;MQRankSum=1.790;QD=14.94;ReadPosRankSum=0.129;VQSLOD=4.8045;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:34,1:35:47.69:374,48,0	1/1:7,0:7:11.74:98,12,0	0/0:20,0:12:29.75:0,30,283	0/0:31,0:16:37.47:0,37,330	0/0:22,0:22:46.97:0,47,379	0/0:21,0:20:47.77:0,48,396	0/0:27,0:27:56.14:0,56,448	1/1:18,0:17:38.68:311,39,0	0/0:20,0:20:43.94:0,44,351	1/1:27,4:31:73.53:713,74,0	1/1:16,2:17:26.25:190,26,0	0/1:27,0:27:69.73:70,0,313	1/1:22,3:25:62.41:565,62,0	1/1:20,2:22:27.60:342,28,0	0/0:21,0:21:44.93:0,45,375	1/1:23,1:24:51.64:489,52,0	0/0:21,0:21:29.89:0,30,239	1/1:11,2:13:35.75:323,36,0	1/1:3,22:25:54.34:576,54,0	1/1:15,4:19:35.90:324,36,0	1/1:39,4:43:44.05:351,44,0	1/1:17,3:21:26.40:284,26,0	0/1:16,0:15:66.42:66,0,135	0/1:34,1:35:99:159,0,373	1/1:17,3:20:35.72:309,36,0	1/1:2,19:21:57.96:583,58,0	1/1:15,4:17:44.74:434,45,0	1/1:15,1:15:28.82:237,29,0
chr10	33865479	.	GCACACA	G	1541.67	PASS	AB=0.714;AC=11;AF=0.212;AN=52;BaseQRankSum=-2.089;DP=648;FS=0.000;HRun=0;HaplotypeScore=207.6328;InbreedingCoeff=0.7092;MQ=56.74;MQ0=9;MQRankSum=-5.580;QD=11.86;ReadPosRankSum=-3.475;VQSLOD=1.8787;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:37:21.05:0,21,178	0/0:7,0:7:3.01:0,3,74	./.	./.	1/1:9,11:22:18.95:350,19,0	1/1:12,7:20:0.03:343,0,0	1/1:18,8:27:17.70:348,18,0	0/0:18,0:17:8.99:0,9,129	1/1:12,7:19:18.06:354,18,0	0/0:33,0:33:38.51:0,39,698	0/0:18,0:17:2.51:0,3,27	0/0:17,0:27:30.10:0,30,766	0/0:25,0:25:27.07:0,27,566	0/0:22,0:22:27.09:0,27,641	0/1:12,1:20:60.06:60,0,225	0/0:24,0:24:31.36:0,31,667	1/1:10,11:21:12.04:245,12,0	0/0:13,0:13:21.03:0,21,381	0/0:27,0:27:36.10:0,36,654	0/0:19,0:19:14.87:0,15,304	0/0:44,0:44:11.41:0,11,183	0/0:21,0:21:19.87:0,20,357	0/0:14,0:15:27.08:0,27,609	0/0:22,0:37:63.12:0,63,1437	0/0:20,0:20:14.51:0,15,300	0/0:26,0:26:51.09:0,51,859	0/0:19,0:17:30.09:0,30,591	0/0:16,0:15:19.22:0,19,333
chr10	33865513	.	A	ACG	2501.76	PASS	AB=0.966;AC=20;AF=0.357;AN=56;BaseQRankSum=7.769;DP=686;FS=0.382;HRun=0;HaplotypeScore=189.4032;InbreedingCoeff=-0.3638;MQ=53.55;MQ0=11;MQRankSum=-2.879;QD=5.52;ReadPosRankSum=3.661;VQSLOD=2.9419;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:45,0:45:72.16:72,0,76	1/1:8,0:8:4.16:30,4,0	0/0:21,0:9:13.99:0,14,169	0/0:34,0:18:53.70:0,54,528	0/0:24,0:24:38.66:0,39,276	0/0:14,0:13:26.52:0,27,180	0/0:26,0:26:31.61:0,32,323	0/1:19,0:18:9.08:141,0,9	0/0:21,0:21:47.67:0,48,355	0/1:27,1:28:88.30:359,0,88	0/1:20,2:21:4.43:28,0,4	0/1:25,0:25:62.47:62,0,272	0/1:21,2:23:21.74:206,0,22	0/1:26,2:28:16.88:210,0,17	0/0:27,0:27:38.33:0,38,455	0/1:28,0:29:26.28:237,0,26	0/0:21,0:21:35.46:0,35,236	0/1:10,1:11:43.16:86,0,43	0/1:27,0:27:87.74:188,0,88	0/1:16,3:19:2.61:130,0,3	0/0:44,1:45:3.02:0,3,58	0/1:22,0:22:51.32:60,0,51	0/1:17,0:17:54.60:55,0,203	0/1:39,0:39:99:111,0,408	0/1:21,0:21:16.66:76,0,17	0/1:33,0:33:35.97:378,0,36	0/1:19,0:18:26.56:129,0,27	0/1:16,1:17:20.64:103,0,21
chr10	33865517	.	A	ACGCACG	7815.28	PASS	AB=0.581;AC=31;AF=0.554;AN=56;BaseQRankSum=-2.053;DP=704;FS=12.178;HRun=0;HaplotypeScore=216.2637;InbreedingCoeff=0.7816;MQ=56.63;MQ0=10;MQRankSum=-5.435;QD=17.60;ReadPosRankSum=-0.804;VQSLOD=2.7322;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:43,0:43:6.65:271,7,0	1/1:1,5:7:2.90:110,3,0	0/0:20,0:9:9.54:0,10,309	0/0:35,0:21:59.76:0,60,1051	0/0:27,0:27:57.06:0,57,763	0/0:10,0:10:24.06:0,24,380	0/0:26,0:26:54.05:0,54,826	1/1:19,0:18:38.98:529,39,0	0/0:22,0:22:51.15:0,51,803	1/1:8,20:32:43.91:895,44,0	0/1:6,15:25:0.04:0,0,0	0/0:25,0:25:55.69:0,56,779	1/1:5,16:25:20.11:532,20,0	1/1:7,18:30:16.62:563,17,0	0/0:22,0:22:54.17:0,54,868	1/1:5,22:31:26.59:818,27,0	0/0:22,0:22:42.09:0,42,569	1/1:7,5:14:12.04:279,12,0	1/1:30,0:30:48.19:806,48,0	1/1:6,10:20:12.04:275,12,0	0/1:12,29:51:7.63:46,0,8	0/1:8,14:22:20.59:68,0,21	0/0:16,0:16:34.03:0,34,484	0/0:35,0:35:72.08:0,72,1006	1/1:3,16:22:11.91:357,12,0	1/1:32,0:32:65.27:1170,65,0	1/1:6,10:20:23.62:567,24,0	1/1:4,10:18:20.94:530,21,0
chr10	33866085	.	GA	G	11875.14	PASS	AB=0.618;AC=37;AF=0.661;AN=56;BaseQRankSum=9.129;DP=649;FS=10.879;HRun=4;HaplotypeScore=178.7037;InbreedingCoeff=-0.2069;MQ=66.52;MQ0=7;MQRankSum=-1.828;QD=20.55;ReadPosRankSum=13.676;VQSLOD=1.5306;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:10,17:26:99:451,0,103	1/1:2,6:8:3.14:193,3,0	0/0:40,0:22:43.64:0,44,462	0/0:31,0:20:21.47:0,21,264	1/1:10,22:32:15.75:623,16,0	1/1:9,20:28:41.41:742,41,0	0/1:1,6:7:6.08:157,0,6	0/1:26,18:44:99:720,0,166	0/1:6,9:15:27.18:327,0,27	1/1:4,21:23:12.47:594,12,0	1/1:11,26:37:27.20:775,27,0	0/1:3,10:12:18.07:283,0,18	0/1:7,12:18:17.71:424,0,18	1/1:8,17:24:18.32:578,18,0	0/1:9,24:32:87.25:714,0,87	1/1:4,13:17:44.66:466,45,0	0/1:10,20:30:59.61:498,0,60	0/1:6,16:20:17.90:477,0,18	0/1:11,3:14:99:105,0,112	1/1:8,21:26:20.36:648,20,0	0/1:2,5:7:16.89:137,0,17	1/1:7,15:22:8.12:493,8,0	0/1:10,19:28:57.75:498,0,58	1/1:5,7:12:20.01:193,20,0	0/1:7,15:22:61.71:444,0,62	0/1:9,8:17:33.02:329,0,33	1/1:7,27:34:42.51:835,43,0	0/1:2,7:9:10.74:170,0,11
chr10	33866092	.	A	AAAG	22442.50	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-0.712;DP=634;FS=4.100;HRun=0;HaplotypeScore=160.4267;InbreedingCoeff=0.9316;MQ=68.49;MQ0=7;MQRankSum=-1.337;QD=39.86;ReadPosRankSum=4.929;VQSLOD=6.0287;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,16:24:30.17:841,30,0	1/1:2,6:8:20.45:359,20,0	0/0:38,0:21:24.56:0,25,515	0/0:32,0:22:16.53:0,17,173	1/1:10,20:30:80.90:1285,81,0	1/1:9,18:26:69.16:1196,69,0	1/1:3,6:9:17.72:335,18,0	1/1:24,14:38:81.87:1182,82,0	1/1:6,8:14:31.70:511,32,0	1/1:5,21:24:68.41:1287,68,0	1/1:11,23:34:80.88:1465,81,0	1/1:6,7:12:31.04:496,31,0	1/1:10,10:19:20.74:651,21,0	1/1:9,14:22:52.91:905,53,0	1/1:12,21:32:76.36:1429,76,0	1/1:5,12:17:42.03:779,42,0	1/1:12,19:31:60.48:1085,60,0	1/1:6,14:19:48.10:831,48,0	1/1:13,3:16:33.76:471,34,0	1/1:12,19:28:80.61:1290,81,0	1/1:2,5:7:6.35:304,6,0	1/1:6,14:20:56.77:911,57,0	1/1:11,15:25:55.96:945,56,0	1/1:7,4:11:18.33:199,18,0	1/1:9,14:23:54.05:945,54,0	1/1:10,8:18:50.61:765,51,0	1/1:7,26:33:86.22:1588,86,0	1/1:3,6:9:26.87:386,27,0
chr10	33866411	.	CA	C	7814.41	PASS	AB=0.576;AC=49;AF=0.875;AN=56;BaseQRankSum=-1.825;DP=528;FS=5.555;HRun=12;HaplotypeScore=59.6620;InbreedingCoeff=0.7086;MQ=71.53;MQ0=0;MQRankSum=-2.318;QD=16.11;ReadPosRankSum=4.231;VQSLOD=5.9189;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,0:18:28.51:82,29,0	1/1:2,9:11:17.92:139,18,0	0/0:17,0:11:0.57:0,1,131	0/0:17,0:13:8.80:0,9,47	1/1:9,16:27:32.85:396,33,0	1/1:1,23:24:56.75:437,57,0	1/1:3,13:17:34.91:261,35,0	1/1:6,16:23:19.36:317,19,0	1/1:1,19:21:58.80:444,59,0	1/1:7,18:28:59.88:435,60,0	1/1:2,13:15:26.86:209,27,0	1/1:0,7:8:19.97:145,20,0	1/1:4,14:18:32.84:255,33,0	1/1:4,13:17:44.77:344,45,0	1/1:1,23:24:62.76:488,63,0	1/1:2,21:23:53.79:418,54,0	1/1:1,28:29:68.73:534,69,0	1/1:1,14:15:35.84:279,36,0	1/1:6,13:20:43.84:326,44,0	1/1:5,18:23:41.61:312,42,0	0/0:7,0:7:18.04:0,18,183	0/1:5,14:19:13.82:237,0,14	1/1:2,11:14:25.93:191,26,0	1/1:3,11:14:26.89:209,27,0	1/1:1,27:28:65.74:511,66,0	1/1:2,19:22:40.43:422,40,0	1/1:2,18:21:43.61:331,44,0	1/1:2,4:6:11.95:93,12,0
chr10	33867431	.	T	TGAGG	16185.89	PASS	AB=1.000;AC=53;AF=0.946;AN=56;BaseQRankSum=-1.922;DP=388;FS=14.426;HRun=0;HaplotypeScore=77.9291;InbreedingCoeff=0.6009;MQ=72.79;MQ0=4;MQRankSum=-4.530;QD=44.22;ReadPosRankSum=4.391;VQSLOD=4.0488;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,15:26:42.14:1069,42,0	1/1:0,7:7:18.06:459,18,0	0/1:29,0:22:7.56:8,0,482	0/0:22,0:16:27.54:0,28,393	1/1:4,12:16:39.13:990,39,0	1/1:4,8:12:24.08:615,24,0	1/1:2,11:13:30.10:762,30,0	1/1:7,8:16:24.04:544,24,0	1/1:3,4:7:18.02:407,18,0	1/1:3,13:16:38.92:940,39,0	1/1:4,10:15:29.94:714,30,0	1/1:3,8:11:17.90:399,18,0	1/1:4,7:11:21.06:540,21,0	1/1:3,16:19:45.13:1075,45,0	1/1:3,12:16:36.12:904,36,0	1/1:0,8:9:12.04:303,12,0	1/1:5,10:15:21.11:637,21,0	1/1:2,4:6:9.03:232,9,0	1/1:6,3:9:9.03:232,9,0	1/1:3,10:15:24.08:567,24,0	1/1:2,7:10:12.04:289,12,0	1/1:4,12:17:36.07:837,36,0	1/1:5,10:15:33.07:758,33,0	1/1:3,8:12:15.05:387,15,0	1/1:3,10:13:27.09:697,27,0	1/1:1,12:13:36.12:918,36,0	1/1:3,10:14:24.08:616,24,0	1/1:0,4:4:12.04:290,12,0
chr10	33867464	.	AAAGGAAGGAAGG	A	1624.81	PASS	AB=0.867;AC=25;AF=0.543;AN=46;BaseQRankSum=2.285;DP=318;FS=47.936;HRun=0;HaplotypeScore=149.4245;InbreedingCoeff=0.5469;MQ=53.19;MQ0=8;MQRankSum=-3.252;QD=12.40;ReadPosRankSum=1.744;VQSLOD=1.3334;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:20:4.26:0,4,42	./.	./.	./.	0/0:18,0:18:27.09:0,27,1429	0/0:12,0:11:12.04:0,12,603	0/0:13,0:13:9.03:0,9,349	0/0:14,0:14:2.04:0,2,6	0/0:5,0:8:15.05:0,15,366	1/1:9,0:9:2.12:22,2,0	1/1:9,0:11:9.02:46,9,0	1/1:6,0:6:2.87:15,3,0	1/1:11,2:11:12.04:305,12,0	1/1:13,1:14:8.42:268,8,0	0/0:14,0:15:12.04:0,12,518	1/1:4,0:5:0.01:1,0,0	0/0:8,0:7:6.02:0,6,298	./.	1/1:6,2:8:6.02:198,6,0	1/1:9,3:12:12:277,12,0	1/1:11,0:11:6:69,6,0	1/1:8,1:9:5.97:56,6,0	0/1:11,0:13:10.94:81,0,11	0/0:10,0:10:2.68:0,3,11	0/0:9,0:11:0.86:0,1,43	1/1:6,1:7:3.01:101,3,0	1/1:9,4:13:12.04:340,12,0	./.
chr10	33867699	.	ACACACACAATCAATCAAT	A	4055.31	PASS	AB=0.983;AC=19;AF=0.339;AN=56;BaseQRankSum=4.071;DP=455;FS=9.979;HRun=0;HaplotypeScore=186.1875;InbreedingCoeff=-0.2681;MQ=44.08;MQ0=21;MQRankSum=-7.003;QD=13.04;ReadPosRankSum=4.100;VQSLOD=1.3326;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:14,0:13:34.11:72,0,34	0/0:3,0:3:6.02:0,6,124	0/0:8,0:7:21.07:0,21,985	0/0:12,0:7:18.06:0,18,752	0/0:17,0:15:15.09:0,15,188	0/0:20,0:20:14.41:0,14,178	0/1:29,0:25:99:259,0,230	0/1:22,0:20:99:639,0,311	0/0:11,0:11:5.97:0,6,60	0/1:19,0:18:99:275,0,531	0/0:18,0:18:26.50:0,27,531	1/1:20,2:22:21.54:791,22,0	0/1:19,0:17:53.97:289,0,54	0/0:8,0:8:12.04:0,12,221	0/1:28,0:26:99:103,0,408	0/1:18,0:17:61.96:62,0,904	0/1:20,0:18:99:179,0,289	0/1:18,0:19:99:267,0,528	0/1:10,0:9:91.80:92,0,233	0/1:16,0:16:65.98:66,0,619	0/0:21,0:18:13.87:0,14,297	0/0:13,0:12:6:0,6,115	0/1:12,6:18:50.75:275,0,51	1/1:9,0:9:0.32:57,0,0	0/0:13,0:13:11.07:0,11,131	0/1:14,0:14:99:372,0,345	0/1:20,0:17:99:256,0,482	0/1:14,0:14:0.46:0,0,118
chr10	33867701	.	ACACACAATCAATCAAT	A	4981.29	PASS	AB=1.000;AC=25;AF=0.446;AN=56;BaseQRankSum=4.218;DP=442;FS=10.175;HRun=0;HaplotypeScore=163.6985;InbreedingCoeff=-0.0817;MQ=43.79;MQ0=24;MQRankSum=-6.871;QD=15.19;ReadPosRankSum=6.650;VQSLOD=2.6391;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:10:6.02:98,6,0	0/0:3,0:3:5.51:0,6,58	0/0:9,0:8:21.07:0,21,1076	0/0:12,0:6:18.06:0,18,752	0/0:18,0:16:6.98:0,7,120	0/1:20,0:20:36.98:60,0,37	0/1:28,0:24:99:267,0,141	0/1:19,0:17:99:657,0,169	1/1:10,0:10:2.37:8,2,0	0/1:18,0:17:99:319,0,370	0/0:18,0:18:25.61:0,26,330	1/1:3,18:21:21.54:951,22,0	1/1:19,0:17:6.20:346,6,0	0/0:8,0:8:9.03:0,9,138	0/1:28,0:26:99:236,0,172	0/1:17,0:17:62.01:62,0,521	0/1:20,0:18:99:210,0,170	0/1:19,0:19:99:271,0,308	0/1:12,0:9:99:133,0,131	0/1:14,0:14:69.64:70,0,332	0/0:21,0:18:13.87:0,14,205	0/0:13,0:12:6.02:0,6,81	1/1:14,2:16:21.07:526,21,0	1/1:8,0:8:3.01:68,3,0	0/0:12,0:12:10.46:0,10,53	0/1:14,0:14:99:407,0,213	0/1:20,0:17:99:258,0,269	0/1:14,0:14:34.35:34,0,49
chr10	33867703	.	ACACAATCAATCAAT	A	5485.94	PASS	AB=0.996;AC=30;AF=0.536;AN=56;BaseQRankSum=6.493;DP=440;FS=8.643;HRun=0;HaplotypeScore=149.7546;InbreedingCoeff=-0.2317;MQ=43.98;MQ0=24;MQRankSum=-7.329;QD=14.71;ReadPosRankSum=8.027;VQSLOD=2.1976;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:3,8:10:6.02:134,6,0	0/1:3,0:3:11.15:11,0,35	0/0:8,0:7:21.07:0,21,1076	0/0:14,0:8:24.08:0,24,1044	0/1:19,0:17:18.17:35,0,18	0/1:19,0:19:30.64:112,0,31	0/1:28,0:24:66.64:296,0,67	0/1:19,0:17:45.26:670,0,45	1/1:10,0:10:3.01:34,3,0	0/1:18,0:17:70.51:348,0,71	0/0:18,0:18:22.26:0,22,184	1/1:21,0:21:21.54:756,22,0	1/1:19,0:17:17.89:430,18,0	0/0:7,0:7:5.98:0,6,47	0/1:25,2:25:99:408,0,148	0/1:16,0:16:68.08:68,0,325	0/1:20,0:18:99:255,0,114	0/1:20,0:20:99:286,0,223	0/1:14,0:11:65.53:276,0,66	0/1:13,0:13:86.17:86,0,205	0/0:20,0:17:13.87:0,14,143	0/1:14,0:13:4.57:5,0,36	1/1:14,0:14:19.79:311,20,0	1/1:8,0:8:2.50:32,3,0	1/1:12,0:12:1.78:24,2,0	0/1:14,0:14:48.25:549,0,48	0/1:20,0:17:99:289,0,125	0/1:14,0:14:32.37:72,0,32
chr10	33867705	.	ACAATCAATCAAT	A	6338.24	PASS	AB=1.000;AC=38;AF=0.731;AN=52;BaseQRankSum=6.587;DP=429;FS=13.924;HRun=0;HaplotypeScore=132.9857;InbreedingCoeff=0.3895;MQ=45.61;MQ0=24;MQRankSum=-3.705;QD=18.64;ReadPosRankSum=7.248;VQSLOD=1.9706;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:10:6.02:134,6,0	1/1:3,0:3:3.01:43,3,0	0/0:9,0:8:24.08:0,24,1239	0/0:14,0:8:24.08:0,24,1044	0/1:21,0:19:1.75:53,0,2	1/1:18,0:18:7.31:180,7,0	1/1:26,1:23:8.11:336,8,0	1/1:17,0:15:27.05:702,27,0	1/1:10,0:10:3.01:60,3,0	1/1:17,0:16:15.05:408,15,0	0/0:17,0:17:4.96:0,5,14	1/1:21,0:21:21.54:658,22,0	1/1:20,0:18:18.06:493,18,0	./.	1/1:13,12:24:12.92:501,13,0	0/1:14,0:14:15.22:95,0,15	1/1:20,0:18:12.04:341,12,0	0/1:19,0:19:37.10:331,0,37	1/1:13,0:10:15.05:362,15,0	0/1:12,0:12:19.78:128,0,20	0/0:20,0:17:7.45:0,7,33	./.	1/1:13,0:13:9.03:224,9,0	0/0:8,0:8:1.36:0,1,4	1/1:11,0:11:2.09:76,2,0	1/1:14,0:14:27.09:690,27,0	1/1:19,0:16:14.84:380,15,0	1/1:14,0:14:6.02:144,6,0
chr10	33867707	.	AATCAATCAAT	A	7563.99	PASS	AB=0.720;AC=43;AF=0.768;AN=56;BaseQRankSum=5.932;DP=405;FS=23.519;HRun=0;HaplotypeScore=112.5221;InbreedingCoeff=0.1611;MQ=45.76;MQ0=24;MQRankSum=-1.006;QD=20.22;ReadPosRankSum=5.532;VQSLOD=1.7373;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,0:10:6.02:134,6,0	1/1:1,1:3:4.83:75,5,0	0/0:9,0:8:24.08:0,24,1239	0/0:14,0:8:24.08:0,24,1044	1/1:3,14:17:4.07:183,4,0	0/1:3,15:18:35.64:293,0,36	0/1:6,16:21:52.15:367,0,52	1/1:5,10:13:30.06:746,30,0	1/1:0,10:10:3.01:105,3,0	1/1:1,15:16:39.08:715,39,0	1/1:9,5:16:3.49:77,3,0	1/1:21,0:21:21.54:560,22,0	1/1:2,16:18:18.06:519,18,0	1/1:3,3:6:5.99:49,6,0	0/1:23,0:21:69.20:352,0,69	1/1:8,2:11:19.17:183,19,0	0/1:6,13:17:78.39:385,0,78	0/1:7,8:16:25.48:357,0,25	1/1:6,7:10:20.66:454,21,0	1/1:9,2:12:7.63:212,8,0	0/1:11,9:17:1.36:9,0,1	1/1:2,11:13:5.05:48,5,0	0/1:11,0:11:17.95:173,0,18	0/0:6,1:7:7.27:0,7,32	1/1:3,6:11:2.09:128,2,0	1/1:2,10:13:33.55:762,34,0	1/1:10,5:15:25.36:504,25,0	1/1:1,12:14:7.58:175,8,0
chr10	33867711	.	AATCAAT	A	3816.31	PASS	AB=0.961;AC=28;AF=0.519;AN=54;BaseQRankSum=8.411;DP=379;FS=9.091;HRun=0;HaplotypeScore=102.7140;InbreedingCoeff=-0.2038;MQ=47.30;MQ0=22;MQRankSum=-4.589;QD=12.81;ReadPosRankSum=6.180;VQSLOD=0.6842;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,0:10:3.48:66,3,0	1/1:2,1:3:3.01:65,3,0	0/0:10,0:9:27.09:0,27,918	0/0:15,0:9:27.09:0,27,859	0/1:18,0:16:13.77:37,0,14	0/1:18,0:18:73.49:142,0,73	0/1:24,1:21:74.02:206,0,74	0/1:15,0:13:29.39:333,0,29	1/1:10,0:10:3.01:47,3,0	0/1:16,1:16:17.75:248,0,18	0/0:11,2:13:2.27:0,2,10	1/1:21,0:21:21.54:308,22,0	0/1:19,1:18:42.47:318,0,42	./.	0/1:21,0:20:46.61:180,0,47	1/1:6,1:7:4.73:67,5,0	0/1:18,0:16:99:222,0,111	0/1:15,0:16:82.65:229,0,83	0/1:13,0:10:59.14:177,0,59	0/1:7,1:8:2.38:115,0,2	0/0:19,0:16:1.47:0,1,7	0/0:13,0:13:0.46:0,0,1	0/1:10,0:10:45.24:82,0,45	0/0:7,0:7:10.80:0,11,124	1/1:8,2:10:2.09:120,2,0	0/1:11,1:12:10.95:400,0,11	0/1:9,2:10:3.30:326,0,3	1/1:13,1:14:5.50:127,5,0
chr10	33869413	.	G	GCAC	23072.38	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=9.651;DP=620;FS=2.724;HRun=0;HaplotypeScore=177.1468;InbreedingCoeff=0.9911;MQ=83.72;MQ0=0;MQRankSum=-17.045;QD=57.25;ReadPosRankSum=-0.500;VQSLOD=5.5234;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,35:40:99:2448,105,0	1/1:1,8:9:24.08:589,24,0	0/0:29,0:29:87.30:0,87,1527	0/0:26,0:26:72.25:0,72,1274	0/0:22,0:22:66.23:0,66,1230	0/0:17,0:17:48.16:0,48,895	0/0:23,0:23:60.21:0,60,1118	1/1:6,21:27:81.25:1839,81,0	0/0:19,0:19:54.19:0,54,1000	1/1:4,18:22:66.23:1594,66,0	1/1:5,16:21:36.11:802,36,0	1/1:6,19:25:63.22:1527,63,0	1/1:3,21:23:60.21:1419,60,0	1/1:3,19:22:60.21:1445,60,0	0/0:36,0:36:99:0,99,1794	1/1:3,15:18:51.18:1251,51,0	0/0:45,0:45:99:0,132,2379	1/1:1,6:7:21.07:516,21,0	1/1:5,10:15:39.11:907,39,0	1/1:4,22:27:60.21:1443,60,0	1/1:4,11:15:12.03:294,12,0	1/1:4,22:27:48.16:1164,48,0	1/1:2,14:16:36.11:822,36,0	1/1:2,11:13:18.06:434,18,0	1/1:3,17:20:39.13:956,39,0	1/1:6,18:24:69.24:1676,69,0	1/1:6,19:25:65.78:1605,66,0	1/1:5,1:6:18.06:341,18,0
chr10	33869419	.	GA	G	9462.60	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=14.264;DP=600;FS=0.674;HRun=2;HaplotypeScore=192.3755;InbreedingCoeff=0.9636;MQ=83.20;MQ0=0;MQRankSum=-17.280;QD=27.11;ReadPosRankSum=1.377;VQSLOD=4.4197;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,102,1456	1/1:0,9:9:27.05:330,27,0	0/0:29,0:29:87.23:0,87,1234	0/0:23,0:23:62.15:0,62,840	0/0:21,0:21:63.20:0,63,925	0/0:19,0:19:54.10:0,54,761	0/0:24,0:24:60.15:0,60,870	1/1:1,23:24:69.22:894,69,0	0/0:20,0:20:57.19:0,57,854	1/1:1,22:23:66.21:849,66,0	1/1:0,19:19:27.09:348,27,0	1/1:2,20:22:50.93:577,51,0	1/1:1,21:21:51.10:636,51,0	1/1:2,18:20:51.05:619,51,0	0/0:32,0:32:90.30:0,90,1349	1/1:2,16:18:39.11:489,39,0	0/0:41,0:41:99:0,120,1798	1/1:1,7:8:17.98:197,18,0	1/1:0,13:13:39.13:505,39,0	1/1:4,24:28:60.02:691,60,0	1/1:2,14:16:11.62:135,12,0	1/1:2,26:28:45.15:576,45,0	1/1:1,13:14:27.07:333,27,0	1/1:2,12:14:14.96:194,15,0	1/1:4,18:22:45.04:530,45,0	1/1:2,19:21:60.14:745,60,0	1/1:3,24:27:63.17:773,63,0	1/1:0,1:1:3.01:39,3,0
chr10	33869480	.	GA	G	16062.73	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=1.528;DP=592;FS=1.121;HRun=4;HaplotypeScore=105.0532;InbreedingCoeff=0.9437;MQ=84.74;MQ0=0;MQRankSum=-11.915;QD=29.97;ReadPosRankSum=6.822;VQSLOD=3.8561;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,36:38:87.26:1042,87,0	1/1:1,7:8:18.06:216,18,0	0/0:35,0:35:99:0,105,1424	0/0:21,0:21:53.72:0,54,652	1/1:0,17:17:48.15:576,48,0	1/1:1,20:21:50.88:612,51,0	1/1:1,23:24:57.17:684,57,0	1/1:1,22:23:63.17:742,63,0	1/1:0,19:19:54.17:648,54,0	1/1:3,16:19:44.50:511,44,0	1/1:1,14:15:42.13:503,42,0	1/1:4,20:24:57.17:682,57,0	1/1:3,15:18:33.10:395,33,0	1/1:1,16:17:51.16:608,51,0	1/1:2,22:24:60.18:720,60,0	1/1:2,21:23:60.18:719,60,0	1/1:2,37:39:99:1223,102,0	1/1:0,15:15:36.11:432,36,0	1/1:0,14:14:39.07:441,39,0	1/1:4,25:29:75.19:882,75,0	1/1:0,26:26:72.22:863,72,0	1/1:3,17:20:39.12:466,39,0	1/1:1,11:12:27.08:324,27,0	1/1:1,14:15:30.09:359,30,0	1/1:0,18:18:48.15:575,48,0	1/1:0,25:25:75.15:869,75,0	1/1:2,29:31:75.23:898,75,0	1/1:0,2:2:6.02:72,6,0
chr10	33869914	.	T	TA	14109.57	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=-12.088;DP=633;FS=11.376;HRun=8;HaplotypeScore=68.4706;InbreedingCoeff=0.9975;MQ=77.47;MQ0=0;MQRankSum=-4.084;QD=28.11;ReadPosRankSum=1.659;VQSLOD=4.7422;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,25:29:63.15:712,63,0	1/1:2,13:15:33.10:381,33,0	0/0:10,0:10:20.99:0,21,187	0/0:16,0:16:32.96:0,33,293	0/0:28,0:28:78.01:0,78,704	0/0:19,0:19:45.01:0,45,412	0/0:27,0:27:74.99:0,75,674	1/1:2,29:31:84.20:937,84,0	0/0:15,0:15:44.99:0,45,403	1/1:2,30:32:90.27:1038,90,0	1/1:4,29:33:84.25:968,84,0	1/1:1,17:18:48.14:554,48,0	1/1:0,24:24:60.18:692,60,0	1/1:1,18:19:51.15:589,51,0	1/1:4,13:17:36.11:415,36,0	1/1:6,15:21:20.67:492,21,0	0/0:16,0:16:45.02:0,45,412	1/1:2,16:18:45.13:519,45,0	1/1:1,18:19:54.15:613,54,0	1/1:3,31:34:93.23:1056,93,0	1/1:1,17:18:48.14:554,48,0	1/1:3,22:25:35.72:665,36,0	1/1:3,23:26:66.15:750,66,0	1/1:2,21:23:57.17:658,57,0	1/1:4,25:29:66.20:762,66,0	1/1:3,32:35:96.29:1107,96,0	1/1:4,15:18:36.09:405,36,0	1/1:8,9:16:21.06:242,21,0
chr10	33870075	.	GA	G	2639.46	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-9.226;DP=580;FS=6.829;HRun=7;HaplotypeScore=85.0100;InbreedingCoeff=0.9858;MQ=78.84;MQ0=0;MQRankSum=0.563;QD=25.14;ReadPosRankSum=3.234;VQSLOD=4.1684;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:48.13:0,48,588	0/0:12,0:12:35.75:0,36,256	0/0:18,0:18:36.11:0,36,443	0/0:16,0:16:36.12:0,36,453	1/1:1,29:30:87.20:886,87,0	1/1:1,16:17:42.10:429,42,0	1/1:1,13:14:36.08:367,36,0	0/0:25,0:25:59.03:0,59,388	1/1:2,18:20:51.12:520,51,0	0/0:35,0:35:94.24:0,94,605	0/0:19,0:19:56.66:0,57,419	0/0:18,0:18:51.16:0,51,641	0/0:26,0:26:74.41:0,74,543	0/0:16,0:16:47.70:0,48,355	0/0:21,0:21:62.53:0,63,448	0/0:19,1:20:25.97:0,26,348	1/1:2,22:24:60.14:612,60,0	0/0:16,0:16:44.76:0,45,339	0/0:25,0:25:68.07:0,68,451	0/0:26,0:26:71.56:0,72,525	0/0:12,0:12:32.84:0,33,250	0/0:19,0:19:47.68:0,48,348	0/0:32,0:32:93.30:0,93,1170	0/0:12,0:12:36.12:0,36,453	0/0:21,0:21:56.51:0,57,395	0/0:38,0:38:99:0,110,732	0/0:25,0:25:59.67:0,60,471	0/0:3,0:3:8.95:0,9,66
chr10	33873055	.	AG	A	2593.50	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=13.214;DP=741;FS=6.736;HRun=1;HaplotypeScore=74.9711;InbreedingCoeff=0.9999;MQ=85.37;MQ0=0;MQRankSum=-1.455;QD=33.68;ReadPosRankSum=3.132;VQSLOD=3.4028;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:59,0:59:99:0,178,2751	0/0:14,0:14:42.13:0,42,648	0/0:20,0:20:51.16:0,51,781	0/0:26,0:26:69.22:0,69,1073	0/0:30,0:30:90.31:0,90,1434	0/0:27,0:27:78.27:0,78,1247	0/0:29,0:29:87.28:0,87,1366	0/0:39,0:39:99:0,111,1705	0/0:28,0:28:81.25:0,81,1235	0/0:31,0:31:93.31:0,93,1468	0/0:19,0:19:51.17:0,51,813	1/1:2,20:22:63.20:817,63,0	0/0:23,0:23:69.24:0,69,1098	0/0:26,0:26:75.24:0,75,1173	0/0:27,0:27:81.26:0,81,1268	0/0:24,0:24:72.23:0,72,1126	0/0:24,0:24:72.25:0,72,1151	0/0:17,0:17:45.13:0,45,694	0/0:21,0:21:63.21:0,63,1007	0/0:29,0:29:87.25:0,87,1359	0/0:29,0:29:87.30:0,87,1388	0/0:32,0:32:96.31:0,96,1505	1/1:0,24:24:69.18:876,69,0	1/1:1,30:31:39.32:1043,39,0	0/0:28,0:28:84.26:0,84,1294	0/0:20,0:20:60.20:0,60,960	0/0:28,0:28:84.29:0,84,1342	0/0:14,0:14:42.14:0,42,671
chr10	33873314	.	CAGTT	C	3165.01	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=12.794;DP=826;FS=2.937;HRun=0;HaplotypeScore=147.7678;InbreedingCoeff=0.9969;MQ=88.88;MQ0=0;MQRankSum=-11.473;QD=35.56;ReadPosRankSum=0.998;VQSLOD=3.9347;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:60,0:60:99:0,169,4345	0/0:6,0:6:18.06:0,18,493	0/0:29,0:29:64.05:0,64,1926	0/0:35,0:35:90.62:0,91,1990	0/0:27,0:27:75.26:0,75,2055	0/0:18,0:18:54.19:0,54,1479	0/0:37,0:37:99:0,108,2831	0/0:31,0:31:93.32:0,93,2488	0/0:41,0:41:99:0,120,3226	0/0:24,0:24:69.24:0,69,1876	0/0:21,0:21:63.22:0,63,1696	1/1:5,29:34:84.29:1607,84,0	0/0:21,0:21:63.22:0,63,1726	0/0:33,0:33:93.32:0,93,2396	0/0:29,0:29:87.30:0,87,2348	0/0:31,0:31:93.32:0,93,2481	0/0:34,0:34:96.33:0,96,2537	0/0:26,0:26:69.20:0,69,1630	0/0:27,0:27:75.26:0,75,2048	0/0:25,0:25:75.26:0,75,2010	0/0:65,0:65:99:0,196,5235	0/0:24,0:24:66.23:0,66,1777	1/1:1,23:24:51.17:905,51,0	1/1:4,27:31:47.73:796,48,0	0/0:20,0:20:60.21:0,60,1581	0/0:31,0:31:93.32:0,93,2439	0/0:32,0:31:90.31:0,90,2371	0/0:10,0:10:30.10:0,30,788
chr10	33873441	.	TC	T	1388.76	PASS	AB=1.000;AC=8;AF=0.143;AN=56;BaseQRankSum=4.195;DP=622;FS=1.140;HRun=1;HaplotypeScore=77.7739;InbreedingCoeff=0.7222;MQ=72.77;MQ0=0;MQRankSum=-2.368;QD=16.94;ReadPosRankSum=-1.582;VQSLOD=3.3586;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:70.41:0,70,458	0/0:13,0:13:39:0,39,458	0/1:13,0:11:9.36:9,0,129	0/1:15,0:13:10.51:11,0,122	0/0:25,0:25:33.18:0,33,459	0/0:16,0:16:38.30:0,38,238	0/0:11,0:11:29.52:0,30,203	0/0:31,0:31:93.11:0,93,1103	0/0:31,0:31:88.38:0,88,556	0/0:39,0:39:99:0,117,1477	0/0:20,0:20:53.99:0,54,592	1/1:0,16:16:33.02:406,33,0	0/0:16,0:16:48.15:0,48,623	0/0:20,0:20:60.12:0,60,730	0/0:23,0:23:22.64:0,23,338	0/0:27,0:27:81.11:0,81,985	0/0:37,0:37:99:0,100,662	0/0:19,0:19:57.08:0,57,686	0/0:21,0:21:51.12:0,51,698	0/0:31,0:31:93.20:0,93,1166	0/0:18,0:18:54.11:0,54,640	0/0:27,0:27:78.10:0,78,941	1/1:7,9:16:43.78:541,44,0	1/1:2,20:22:45.04:573,45,0	0/0:26,0:26:78.23:0,78,1003	0/0:24,0:24:70.09:0,70,891	0/0:34,0:34:99:0,102,1254	0/0:4,0:4:12.04:0,12,159
chr10	33873442	.	C	CT	4070.71	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-9.962;DP=633;FS=0.000;HRun=10;HaplotypeScore=71.8060;InbreedingCoeff=0.8626;MQ=71.22;MQ0=0;MQRankSum=1.626;QD=23.39;ReadPosRankSum=0.318;VQSLOD=4.1141;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,24:27:38.51:615,39,0	0/0:12,1:13:0.98:0,1,214	0/0:12,0:10:4.53:0,5,29	0/0:14,0:12:4.46:0,4,23	1/1:6,21:27:32.39:514,32,0	1/1:1,15:16:36.09:384,36,0	1/1:1,11:12:27.04:278,27,0	0/0:31,0:31:65.88:0,66,538	1/1:3,28:31:81.20:864,81,0	0/0:39,0:39:99:0,108,886	0/0:19,0:19:41.88:0,42,341	0/0:18,0:18:1.69:0,2,18	0/0:16,0:16:47.95:0,48,394	0/0:20,0:20:53.92:0,54,440	1/1:7,16:23:35.51:576,36,0	0/0:27,1:28:36.90:0,37,509	1/1:8,30:38:59.57:839,60,0	0/0:19,0:20:47.88:0,48,389	0/0:20,1:21:16.29:0,16,335	0/0:33,0:33:46.08:0,46,581	0/0:18,0:18:35.93:0,36,296	0/0:25,1:26:36.88:0,37,504	0/0:18,0:18:10.78:0,11,44	0/0:22,0:22:18.67:0,19,58	0/0:26,0:26:71.92:0,72,591	0/0:24,0:25:61.93:0,62,499	0/0:36,0:36:92.86:0,93,763	0/0:4,0:4:11.99:0,12,99
chr10	33873539	.	T	TAA	1612.73	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-1.265;DP=554;FS=9.519;HRun=9;HaplotypeScore=66.0405;InbreedingCoeff=0.9860;MQ=75.39;MQ0=0;MQRankSum=-3.366;QD=23.04;ReadPosRankSum=1.316;VQSLOD=2.1130;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:14:35.82:0,36,363	0/0:10,0:10:30.08:0,30,319	0/0:9,0:9:16.27:0,16,162	0/0:15,0:17:21.02:0,21,250	0/0:26,0:26:60.09:0,60,623	0/0:18,0:18:51.11:0,51,543	0/0:15,0:15:36.06:0,36,375	0/0:32,0:33:73.90:0,74,764	0/0:19,0:19:51.12:0,51,543	0/0:24,0:24:60.13:0,60,637	0/0:25,0:25:60.13:0,60,630	1/1:4,13:17:39.13:600,39,0	0/0:15,0:15:42.10:0,42,447	0/0:23,0:23:63.15:0,63,671	1/1:2,0:18:34.93:120,35,0	0/0:17,0:17:45.08:0,45,463	0/0:25,0:25:63.15:0,63,671	0/0:13,0:13:33.08:0,33,351	0/0:26,0:25:72.06:0,72,750	0/0:38,0:38:93.17:0,93,980	0/0:9,0:9:24.53:0,25,256	0/0:22,0:22:32.61:0,33,550	1/1:3,14:17:42.10:620,42,0	1/1:1,15:18:32.08:433,32,0	0/0:18,0:18:48.11:0,48,511	0/0:22,0:22:54.12:0,54,575	0/0:41,0:40:93.13:0,93,973	0/0:5,0:5:12.03:0,12,128
chr10	33873697	.	CT	C	1812.44	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.278;DP=614;FS=3.494;HRun=9;HaplotypeScore=63.0974;InbreedingCoeff=0.9958;MQ=70.88;MQ0=0;MQRankSum=-0.395;QD=21.07;ReadPosRankSum=3.752;VQSLOD=4.5759;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:93.76:0,94,628	0/0:8,0:8:21.06:0,21,242	0/0:13,0:13:23.96:0,24,237	0/0:21,0:23:30.81:0,31,408	0/0:20,0:20:42.12:0,42,485	0/0:21,0:21:63.17:0,63,709	0/0:11,0:11:26.97:0,27,293	0/0:38,0:38:96.26:0,96,1089	0/0:23,0:23:63.19:0,63,727	0/0:32,0:32:84.24:0,84,962	0/0:17,0:17:42.12:0,42,476	1/1:1,20:21:57.03:522,57,0	0/0:20,0:20:54.16:0,54,617	0/0:18,0:18:51.15:0,51,588	0/0:16,0:16:42.12:0,42,485	0/0:19,0:19:48.14:0,48,554	0/0:21,0:21:57.15:0,57,640	0/0:16,0:16:48.14:0,48,553	0/0:25,0:26:66.03:0,66,740	0/0:24,0:24:60.18:0,60,692	0/0:20,0:20:51.15:0,51,589	0/0:14,0:14:39.09:0,39,430	1/1:4,26:31:74.07:665,74,0	1/1:3,31:34:84.04:769,84,0	0/0:16,0:16:48.13:0,48,546	0/0:29,0:29:78.22:0,78,885	0/0:34,0:34:87.25:0,87,995	0/0:14,0:14:21.03:0,21,229
chr10	33874671	.	G	GACACAC	5123.67	PASS	AB=0.800;AC=45;AF=0.865;AN=52;BaseQRankSum=-1.688;DP=567;FS=17.169;HRun=0;HaplotypeScore=142.3886;InbreedingCoeff=0.5199;MQ=64.92;MQ0=18;MQRankSum=-4.688;QD=11.51;ReadPosRankSum=-3.257;VQSLOD=2.0148;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:36:6.46:106,6,0	0/1:2,1:4:35.89:90,0,36	./.	./.	1/1:18,0:17:6:122,6,0	1/1:18,0:20:12.51:291,13,0	1/1:18,0:22:9.03:234,9,0	1/1:41,0:41:20.01:227,20,0	1/1:9,0:10:6.02:156,6,0	1/1:20,0:19:33.06:687,33,0	1/1:15,0:21:3.01:38,3,0	0/0:16,0:17:25.17:0,25,451	1/1:15,5:22:7.84:174,8,0	1/1:10,0:10:9.01:185,9,0	1/1:16,2:26:14.63:393,15,0	1/1:10,6:16:18.06:541,18,0	1/1:19,0:23:9.03:224,9,0	1/1:10,4:13:5.69:107,6,0	1/1:10,0:10:6.02:167,6,0	1/1:16,0:15:12:190,12,0	1/1:18,0:29:9.03:160,9,0	1/1:17,6:25:6.02:139,6,0	0/0:19,0:19:18.04:0,18,271	0/0:20,0:20:26.87:0,27,517	1/1:11,1:12:3.01:42,3,0	1/1:7,5:13:21.07:477,21,0	1/1:12,3:17:9.54:175,10,0	1/1:4,0:6:12.04:196,12,0
chr10	33875502	.	T	TACAC	4297.23	PASS	AB=0.791;AC=34;AF=0.739;AN=46;BaseQRankSum=-3.495;DP=674;FS=7.688;HRun=0;HaplotypeScore=147.3152;InbreedingCoeff=0.3503;MQ=64.03;MQ0=10;MQRankSum=-1.257;QD=9.20;ReadPosRankSum=-1.768;VQSLOD=3.4942;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:34,0:48:59.76:60,0,66	1/1:7,2:9:5.93:141,6,0	./.	./.	1/1:12,3:17:2.91:71,3,0	0/1:22,2:25:21.49:325,0,21	1/1:13,3:20:8.50:95,8,0	1/1:25,0:25:17.71:269,18,0	1/1:13,8:23:8.77:154,9,0	1/1:26,2:28:36.49:499,36,0	1/1:16,2:17:5.58:82,6,0	0/0:10,0:15:9.01:0,9,84	1/1:9,3:14:6.02:142,6,0	./.	0/0:14,0:23:6.41:0,6,55	1/1:20,8:35:6.02:141,6,0	0/1:20,7:32:19.95:443,0,20	1/1:14,1:16:5.74:36,6,0	1/1:14,0:14:14.92:156,15,0	0/1:15,5:20:12.89:268,0,13	1/1:51,5:60:39.63:648,40,0	1/1:13,2:21:6.02:142,6,0	0/0:20,0:28:18.02:0,18,167	0/0:19,0:32:12.95:0,13,246	./.	1/1:11,3:16:21.74:325,22,0	1/1:10,5:21:15.52:300,16,0	./.
chr10	33875802	.	A	AAGAAAATT	36745.92	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-5.968;DP=594;FS=5.228;HRun=0;HaplotypeScore=123.8475;InbreedingCoeff=0.8655;MQ=72.23;MQ0=0;MQRankSum=-7.935;QD=66.69;ReadPosRankSum=2.279;VQSLOD=4.9509;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,14:25:42.14:1629,42,0	1/1:5,6:11:18.06:741,18,0	0/0:23,0:23:9.65:0,10,978	0/0:20,0:19:22.88:0,23,678	1/1:5,18:23:42.07:1384,42,0	1/1:7,22:29:54.18:2278,54,0	1/1:5,6:12:24.08:922,24,0	1/1:19,15:35:62.83:1486,63,0	1/1:4,21:27:45.15:1897,45,0	1/1:12,18:36:72.20:2247,72,0	1/1:6,14:23:48.08:1741,48,0	1/1:7,11:20:30.10:1244,30,0	1/1:3,14:17:30.10:1264,30,0	1/1:3,7:12:24.08:923,24,0	1/1:6,10:21:27.09:1139,27,0	1/1:5,14:20:39.13:1528,39,0	1/1:7,6:14:18.06:723,18,0	1/1:7,8:15:13.86:504,14,0	1/1:9,14:23:45.01:1411,45,0	1/1:14,23:38:60.20:2396,60,0	1/1:6,3:10:18.02:540,18,0	1/1:5,8:14:27.09:1102,27,0	1/1:8,18:27:44.62:1703,45,0	1/1:2,7:9:12.04:506,12,0	1/1:7,24:32:66.23:2620,66,0	1/1:5,17:23:57.13:2195,57,0	1/1:7,18:29:57.16:2373,57,0	1/1:2,4:6:4.19:251,4,0
chr10	33877690	.	C	CATTCTCCCAG	7400.45	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-5.298;DP=705;FS=3.310;HRun=0;HaplotypeScore=200.9681;InbreedingCoeff=0.9906;MQ=87.80;MQ0=0;MQRankSum=-11.849;QD=82.23;ReadPosRankSum=-1.463;VQSLOD=4.3931;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,153,4749	0/0:15,0:15:42.14:0,42,1257	0/0:35,0:35:90.04:0,90,2463	0/0:23,0:23:60.16:0,60,1562	0/0:24,0:24:72.22:0,72,2221	0/0:21,0:21:63.19:0,63,1867	0/0:25,0:25:72.25:0,72,2357	0/0:29,0:29:87.29:0,87,2813	0/0:31,0:31:90.29:0,90,2858	0/0:34,0:34:96.21:0,96,2862	0/0:21,0:21:57.18:0,57,1767	1/1:5,8:19:36.12:1697,36,0	0/0:23,0:23:66.20:0,66,2084	0/0:35,0:35:96.29:0,96,2923	1/1:4,18:26:62.94:3243,63,0	0/0:20,0:20:60.20:0,60,1823	0/0:18,0:18:54.17:0,54,1657	0/0:14,0:14:39.13:0,39,1152	0/0:19,0:19:54.18:0,54,1686	0/0:23,0:23:66.23:0,66,2116	0/0:44,0:44:99:0,120,3604	0/0:25,0:25:69.22:0,69,2055	1/1:4,15:28:45.11:2134,45,0	1/1:4,6:17:11.74:326,12,0	0/0:13,0:13:39.13:0,39,1232	0/0:32,0:32:96.33:0,96,3016	0/0:25,0:25:75.26:0,75,2374	0/0:11,0:11:30.10:0,30,1001
chr10	33878327	.	CA	C	10063.73	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=0.386;DP=622;FS=37.444;HRun=11;HaplotypeScore=126.1816;InbreedingCoeff=0.9078;MQ=67.55;MQ0=9;MQRankSum=-5.356;QD=17.59;ReadPosRankSum=5.831;VQSLOD=3.2656;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,28:31:57.89:574,58,0	1/1:1,15:16:44.94:369,45,0	0/0:19,0:14:35.45:0,35,330	0/0:31,0:21:3.65:0,4,223	1/1:3,26:27:65.76:531,66,0	1/1:4,13:17:32.79:262,33,0	1/1:0,15:15:43.68:330,44,0	1/1:5,12:15:35.85:293,36,0	1/1:2,21:23:59.87:492,60,0	1/1:4,29:35:90.45:703,90,0	1/1:1,27:28:80.87:660,81,0	1/1:3,0:21:32.59:96,33,0	1/1:5,20:23:59.54:464,60,0	1/1:3,11:14:20.22:253,20,0	1/1:1,22:22:62.90:517,63,0	1/1:7,21:28:58.88:473,59,0	1/1:2,16:18:47.73:377,48,0	1/1:1,12:13:29.88:239,30,0	1/1:5,12:16:38.07:269,38,0	1/1:7,24:29:68.61:556,69,0	1/1:1,16:16:44.95:369,45,0	1/1:2,24:25:65.85:536,66,0	1/1:2,0:25:40.73:120,41,0	1/1:0,0:20:26.95:79,27,0	1/1:2,21:20:56.90:465,57,0	1/1:6,15:22:46.24:333,46,0	1/1:3,22:24:62.87:517,63,0	1/1:0,7:9:23.89:186,24,0
chr10	33878433	.	T	TAA	10219.72	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-3.293;DP=592;FS=10.229;HRun=10;HaplotypeScore=105.1212;InbreedingCoeff=0.9731;MQ=70.89;MQ0=0;MQRankSum=-1.668;QD=26.48;ReadPosRankSum=-1.677;VQSLOD=3.4074;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:29:44.92:158,45,0	1/1:2,1:4:6.75:56,7,0	0/0:14,0:14:17.03:0,17,193	0/0:9,0:9:8.48:0,8,72	0/0:37,0:37:96.13:0,96,957	0/0:16,0:16:36.06:0,36,366	0/0:19,0:19:45.08:0,45,458	1/1:5,10:17:39.05:513,39,0	0/0:18,0:18:45.09:0,45,457	1/1:3,25:28:75.17:1034,75,0	1/1:5,23:30:68.63:927,69,0	0/0:18,0:19:44.81:0,45,439	1/1:6,9:18:44.11:519,44,0	1/1:3,19:22:51.04:685,51,0	1/1:2,0:20:42.42:149,42,0	1/1:2,19:21:17.64:640,18,0	0/0:31,0:31:81.15:0,81,824	1/1:2,11:14:29.59:411,30,0	1/1:4,20:25:42.81:866,43,0	1/1:7,29:39:97.03:1174,97,0	1/1:1,14:17:30.06:391,30,0	1/1:3,18:24:55.56:692,56,0	0/0:26,0:26:57.03:0,57,571	0/0:17,0:17:42.03:0,42,418	1/1:5,13:20:38.61:530,39,0	1/1:4,12:20:41.57:527,42,0	1/1:8,21:29:44.64:636,45,0	1/1:0,8:8:21.07:313,21,0
chr10	33878588	.	T	TAA	16371.77	PASS	AB=0.950;AC=51;AF=0.911;AN=56;BaseQRankSum=-4.843;DP=576;FS=6.894;HRun=10;HaplotypeScore=74.7263;InbreedingCoeff=0.7464;MQ=68.55;MQ0=4;MQRankSum=-5.635;QD=29.45;ReadPosRankSum=2.720;VQSLOD=5.0886;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,30:35:78.13:1131,78,0	1/1:0,8:9:20.96:284,21,0	0/0:11,0:11:24.73:0,25,215	0/0:8,0:8:8.75:0,9,127	1/1:7,26:33:78.05:1037,78,0	1/1:3,16:20:50.66:724,51,0	1/1:3,13:16:36.12:538,36,0	1/1:4,27:31:75.17:1032,75,0	1/1:1,15:18:35.60:485,36,0	1/1:9,22:31:66.15:896,66,0	1/1:3,27:29:75.05:992,75,0	1/1:16,0:16:41.04:354,41,0	1/1:5,20:25:51.17:754,51,0	1/1:3,12:16:38.58:522,39,0	1/1:3,1:24:48.08:490,48,0	1/1:3,14:17:30.09:429,30,0	1/1:1,13:14:27.09:403,27,0	1/1:1,14:14:33.11:493,33,0	1/1:5,12:22:49.75:577,50,0	1/1:1,32:33:87.12:1175,87,0	1/1:0,9:9:18.06:268,18,0	1/1:3,13:18:41.21:523,41,0	1/1:27,0:26:62.81:547,63,0	0/1:18,1:19:17.46:321,0,17	1/1:3,15:19:39.13:581,39,0	1/1:2,10:14:35.08:445,35,0	1/1:5,21:26:47.96:714,48,0	1/1:3,15:17:45.15:658,45,0
chr10	33878597	.	A	AAG	7095.33	PASS	AB=1.000;AC=35;AF=0.625;AN=56;BaseQRankSum=4.069;DP=581;FS=4.360;HRun=0;HaplotypeScore=98.9524;InbreedingCoeff=-0.2352;MQ=67.87;MQ0=4;MQRankSum=-1.064;QD=12.72;ReadPosRankSum=11.695;VQSLOD=2.8176;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:37,0:37:12.32:439,12,0	0/1:11,0:11:46.45:79,0,46	0/0:13,0:12:28.11:0,28,320	0/0:10,0:9:24.01:0,24,265	0/1:30,0:30:32.80:301,0,33	1/1:18,0:18:18.28:248,18,0	1/1:14,0:14:11.65:184,12,0	0/1:37,0:37:99:265,0,163	0/1:18,0:18:0.76:153,0,1	0/1:27,0:27:93.91:225,0,94	0/1:29,0:28:5.58:286,0,6	1/1:1,13:15:41.88:662,42,0	1/1:22,0:22:50.07:318,50,0	0/1:15,0:15:35.92:165,0,36	0/1:24,0:24:21.05:21,0,83	0/1:18,0:18:22.58:124,0,23	0/1:16,0:16:18.82:129,0,19	0/1:17,0:16:29.75:166,0,30	0/1:23,0:23:99:125,0,136	1/1:32,0:32:47.84:418,48,0	0/1:10,0:10:5:89,0,5	0/1:16,0:16:1.98:153,0,2	1/1:0,25:24:63.03:1060,63,0	1/1:4,18:22:42.14:706,42,0	0/1:21,0:21:58.93:177,0,59	0/1:18,0:18:99:107,0,110	0/1:26,0:25:71.53:229,0,72	1/1:17,0:16:21.81:264,22,0
chr10	33879241	.	C	CAA	1874.57	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-6.742;DP=491;FS=10.621;HRun=8;HaplotypeScore=60.6047;InbreedingCoeff=0.9771;MQ=75.20;MQ0=0;MQRankSum=-1.679;QD=32.89;ReadPosRankSum=0.260;VQSLOD=2.5844;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:38.40:0,38,422	0/0:11,0:11:33.09:0,33,368	0/0:14,0:14:24.05:0,24,261	0/0:13,0:14:12.48:0,12,217	0/0:26,0:26:69.17:0,69,760	0/0:16,0:16:45.11:0,45,502	0/0:9,0:9:24.04:0,24,258	0/0:20,0:20:51.11:0,51,551	0/0:15,0:15:42.11:0,42,468	0/0:22,0:22:34.64:0,35,601	0/0:25,0:25:66.15:0,66,726	1/1:2,10:12:30.10:475,30,0	0/0:16,0:16:42.09:0,42,458	0/0:15,0:15:39.10:0,39,435	0/0:14,0:14:39.10:0,39,435	0/0:13,0:13:36.06:0,36,382	0/0:12,0:12:33.01:0,33,335	0/0:12,0:13:38.82:0,39,402	0/0:31,0:31:72.15:0,72,793	0/0:29,0:30:72.11:0,72,851	0/0:14,0:14:39.10:0,39,435	0/0:11,0:11:30.08:0,30,334	1/1:6,17:24:51.17:783,51,0	1/1:1,20:21:48.16:759,48,0	0/0:18,0:18:51.14:0,51,569	0/0:22,0:22:63.17:0,63,702	0/0:30,0:29:81.17:0,81,884	0/0:4,0:4:12.03:0,12,134
chr10	33879855	.	G	GAAAA	1553.27	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=2.856;DP=460;FS=3.090;HRun=9;HaplotypeScore=75.5327;InbreedingCoeff=0.9836;MQ=70.34;MQ0=0;MQRankSum=-1.922;QD=28.24;ReadPosRankSum=0.429;VQSLOD=1.5838;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:51.15:0,51,743	0/0:8,0:8:21.06:0,21,307	0/0:11,0:11:24.95:0,25,334	0/0:10,0:10:14.98:0,15,201	0/0:18,0:18:48.12:0,48,700	0/0:21,0:21:57.10:0,57,754	0/0:10,0:10:27.06:0,27,394	0/0:16,0:16:33.07:0,33,464	0/0:12,0:12:24.03:0,24,349	0/0:27,0:27:54.08:0,54,769	0/0:16,0:16:39.07:0,39,570	1/1:0,8:9:21.07:490,21,0	0/0:17,0:17:51.17:0,51,746	0/0:11,0:11:27.03:0,27,392	1/1:1,0:16:40.99:242,41,0	0/0:10,0:10:24.05:0,24,350	0/0:29,0:29:81.24:0,81,1163	0/0:19,0:19:51.16:0,51,746	0/0:27,0:27:66.14:0,66,964	0/0:25,0:25:44.15:0,44,818	0/0:15,0:15:16.95:0,17,544	0/0:6,0:7:21.05:0,21,287	1/1:4,9:13:21.07:491,21,0	1/1:3,13:17:20.83:489,21,0	0/0:16,0:16:39.03:0,39,528	0/0:27,0:27:69.22:0,69,1008	0/0:25,0:25:69.16:0,69,989	0/0:7,0:7:21.07:0,21,307
chr10	33880162	.	T	TACAC	1790.95	PASS	AB=1.000;AC=35;AF=0.700;AN=50;BaseQRankSum=-4.855;DP=568;FS=9.450;HRun=0;HaplotypeScore=105.8431;InbreedingCoeff=0.3493;MQ=65.75;MQ0=19;MQRankSum=2.641;QD=4.96;ReadPosRankSum=-0.600;VQSLOD=1.5543;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:31,0:32:14.94:15,0,22	1/1:9,0:9:3.01:42,3,0	./.	./.	./.	0/0:8,0:10:6.01:0,6,55	0/0:16,0:17:3.47:0,3,29	1/1:25,0:25:4.11:10,4,0	0/0:14,0:21:17.99:0,18,160	0/0:11,0:14:8.37:0,8,62	0/0:3,0:6:3:0,3,27	1/1:11,2:17:3.01:70,3,0	0/1:10,0:10:36.36:36,0,40	1/1:18,0:18:8.59:77,9,0	1/1:13,0:10:5.93:90,6,0	1/1:10,0:10:9:118,9,0	0/0:17,0:19:8.38:0,8,79	0/1:13,0:14:15:117,0,15	1/1:16,0:14:6.01:71,6,0	1/1:15,0:14:3.01:70,3,0	1/1:69,0:67:42.02:476,42,0	1/1:12,0:11:6:67,6,0	1/1:12,0:12:3.01:43,3,0	1/1:27,0:27:6:66,6,0	1/1:12,0:12:12.04:165,12,0	1/1:22,0:22:12.51:225,13,0	1/1:16,0:14:3.91:70,4,0	1/1:5,4:9:3.90:119,4,0
chr10	33881099	.	C	CCAA	2507.58	PASS	AB=0.944;AC=7;AF=0.125;AN=56;BaseQRankSum=-5.541;DP=662;FS=1.956;HRun=0;HaplotypeScore=101.8392;InbreedingCoeff=0.8327;MQ=59.49;MQ0=5;MQRankSum=-1.063;QD=34.83;ReadPosRankSum=0.662;VQSLOD=3.8195;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:66,1:67:99:0,119,2845	0/0:15,0:15:42.14:0,42,695	0/0:24,0:16:36.12:0,36,584	0/0:30,0:24:45.89:0,46,798	0/0:32,0:32:87.30:0,87,1419	0/0:23,0:23:63.20:0,63,1010	0/0:13,0:13:30.10:0,30,500	0/0:27,0:26:69.21:0,69,1100	0/1:16,1:16:21.47:21,0,654	0/0:38,0:38:99:0,111,1618	0/0:27,0:27:78.20:0,78,1210	1/1:2,20:21:48.16:1070,48,0	0/0:24,0:24:69.24:0,69,1146	0/0:19,0:19:57.14:0,57,849	0/0:28,0:28:75.25:0,75,1226	0/0:14,0:14:39.12:0,39,623	0/0:22,0:22:60.20:0,60,988	0/0:13,0:13:27.09:0,27,449	0/0:18,0:14:42.11:0,42,648	0/0:16,0:16:48.14:0,48,745	0/0:33,0:33:84.27:0,84,1370	0/0:23,0:23:63.19:0,63,1006	1/1:1,10:12:30:616,30,0	1/1:0,20:21:42.62:949,43,0	0/0:19,0:19:54.18:0,54,899	0/0:35,0:35:99:0,99,1535	0/0:24,0:24:69.20:0,69,1096	0/0:6,0:6:15.04:0,15,225
chr10	33881332	.	C	CT	5992.11	PASS	AB=0.648;AC=37;AF=0.661;AN=56;BaseQRankSum=-7.936;DP=401;FS=10.626;HRun=9;HaplotypeScore=45.6257;InbreedingCoeff=0.7265;MQ=58.91;MQ0=5;MQRankSum=-0.298;QD=21.87;ReadPosRankSum=-0.060;VQSLOD=4.8465;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:71.97:0,72,625	1/1:2,10:12:27.07:299,27,0	0/0:10,0:9:23.95:0,24,202	0/0:5,0:4:3:0,3,26	0/0:32,0:32:77.94:0,78,670	0/0:23,0:23:53.97:0,54,468	0/0:8,0:8:20.99:0,21,182	1/1:9,12:20:39.02:404,39,0	0/0:8,0:8:21:0,21,182	1/1:4,23:26:63.12:682,63,0	1/1:2,18:20:54.09:583,54,0	1/1:3,0:11:17.72:106,18,0	1/1:4,14:17:45.12:497,45,0	1/1:0,3:3:6.02:66,6,0	1/1:1,11:12:27.07:299,27,0	1/1:2,10:12:30.08:332,30,0	0/0:14,0:14:28.88:0,29,273	1/1:4,6:9:15.04:161,15,0	0/1:5,8:13:16.45:233,0,16	1/1:5,16:21:36:370,36,0	0/1:5,4:9:15.30:85,0,15	0/1:5,7:11:1.47:176,0,1	1/1:1,0:6:11.36:57,11,0	1/1:1,0:3:8.05:36,8,0	1/1:2,14:16:33.05:352,33,0	1/1:4,13:17:13.13:372,13,0	1/1:2,22:23:63.13:683,63,0	1/1:0,6:6:18.05:199,18,0
chr10	33883202	.	CT	C	790.97	PASS	AB=0.889;AC=18;AF=0.333;AN=54;BaseQRankSum=3.425;DP=173;FS=1.236;HRun=10;HaplotypeScore=33.4540;InbreedingCoeff=0.6545;MQ=74.62;MQ0=0;MQRankSum=0.034;QD=11.14;ReadPosRankSum=1.758;VQSLOD=1.8798;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,4:6:12:104,12,0	0/0:2,0:2:6.02:0,6,66	0/0:12,0:12:11.99:0,12,112	0/0:10,0:7:8.60:0,9,81	1/1:2,7:9:20.98:182,21,0	./.	1/1:2,2:4:2.99:26,3,0	0/0:13,0:12:30.07:0,30,324	1/1:1,5:6:14.99:130,15,0	0/0:3,0:3:5.05:0,5,57	0/0:5,0:5:9.02:0,9,99	1/1:0,2:2:6:52,6,0	0/0:4,0:4:12.03:0,12,132	0/0:3,0:3:6.02:0,6,66	0/0:2,0:2:3.01:0,3,33	0/0:1,0:1:3.01:0,3,33	1/1:0,5:5:15:130,15,0	0/0:11,0:11:30.06:0,30,320	0/1:7,1:7:8.01:8,0,148	0/0:6,0:6:12.03:0,12,133	0/0:3,0:3:9.02:0,9,100	0/0:3,0:3:9.02:0,9,99	1/1:4,12:16:26.97:234,27,0	1/1:0,7:7:11.98:104,12,0	0/0:5,0:5:15.04:0,15,166	0/0:11,0:11:30.08:0,30,332	0/0:7,0:8:20.89:0,21,213	0/1:7,1:8:2.96:3,0,181
chr10	33883232	.	CATATATATATATATATAT	C	696.07	PASS	AC=6;AF=0.214;AN=28;BaseQRankSum=2.304;DP=115;FS=5.122;HRun=0;HaplotypeScore=56.5238;InbreedingCoeff=0.4907;MQ=59.65;MQ0=4;MQRankSum=-0.606;QD=43.50;ReadPosRankSum=1.369;VQSLOD=1.3563;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:10,0:6:7.38:0,7,129	0/0:25,0:11:24.05:0,24,534	./.	./.	./.	0/0:7,0:5:3.01:0,3,55	0/0:2,0:2:6.01:0,6,219	./.	./.	1/1:0,2:1:3.01:150,3,0	./.	./.	./.	./.	0/0:5,0:5:12.04:0,12,553	0/0:9,0:10:9.03:0,9,547	0/0:3,0:2:3:0,3,26	./.	./.	./.	1/1:6,4:9:15.02:499,15,0	1/1:3,1:4:3.01:150,3,0	0/0:2,0:2:3.01:0,3,51	0/0:8,0:8:6.02:0,6,135	0/0:3,0:3:3.01:0,3,49	0/0:3,0:7:21.07:0,21,1237
chr10	33886106	.	G	GT	2610.84	PASS	AC=30;AF=0.600;AN=50;BaseQRankSum=-5.503;DP=677;FS=7.069;HRun=4;HaplotypeScore=21.4681;InbreedingCoeff=0.8178;MQ=28.61;MQ0=202;MQRankSum=-0.938;QD=7.57;ReadPosRankSum=0.694;VQSLOD=-0.1386;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:26:21.06:0,21,238	1/1:7,11:7:3.01:41,3,0	0/0:11,0:3:6.01:0,6,60	0/0:8,0:2:6.02:0,6,65	0/0:30,0:19:27.08:0,27,306	./.	./.	1/1:28,11:3:3.01:33,3,0	0/0:22,0:12:9.03:0,9,102	1/1:8,16:12:32.91:451,33,0	1/1:2,14:11:15.05:205,15,0	0/0:18,0:9:12.03:0,12,136	1/1:8,15:7:6.02:82,6,0	./.	0/0:40,0:16:18.05:0,18,204	1/1:8,13:9:9.03:123,9,0	0/0:51,0:30:33.09:0,33,374	1/1:5,4:5:6.02:82,6,0	1/1:16,11:4:12.03:148,12,0	1/1:6,28:20:36.08:471,36,0	1/1:3,13:11:24.04:307,24,0	1/1:9,24:14:12.04:164,12,0	0/0:29,0:17:15.04:0,15,170	0/0:30,0:20:18.05:0,18,202	1/1:4,15:9:12.04:164,12,0	1/1:12,12:7:18.06:246,18,0	1/1:12,16:10:9.03:123,9,0	1/1:0,12:5:12.04:164,12,0
chr10	33889799	.	A	AT	1089.92	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-1.703;DP=521;FS=0.665;HRun=7;HaplotypeScore=73.7947;InbreedingCoeff=0.9971;MQ=61.38;MQ0=0;MQRankSum=2.259;QD=25.95;ReadPosRankSum=0.563;VQSLOD=4.2378;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,114,1096	0/0:9,0:9:27.04:0,27,261	0/0:23,0:21:50.39:0,50,502	0/0:19,0:15:33.03:0,33,311	0/0:28,0:28:72.11:0,72,695	0/0:11,0:11:33.05:0,33,319	0/0:21,0:21:48.06:0,48,463	0/0:23,0:23:60.09:0,60,579	0/0:18,0:18:48.06:0,48,459	0/0:26,0:26:72.11:0,72,695	0/0:22,0:22:57.09:0,57,550	1/1:0,8:8:21.06:254,21,0	0/0:11,0:11:33.05:0,33,319	0/0:15,0:15:36.05:0,36,348	0/0:14,0:14:36.05:0,36,343	0/0:11,0:11:33.05:0,33,319	0/0:17,0:17:45.07:0,45,435	0/0:12,0:12:30.03:0,30,283	0/0:19,0:18:33.01:0,33,310	0/0:19,0:19:53.83:0,54,504	0/0:17,0:17:36.04:0,36,348	0/0:16,0:16:41.94:0,42,383	1/1:1,17:17:39.12:471,39,0	1/1:0,15:16:42.13:507,42,0	0/0:22,0:22:57.06:0,57,543	0/0:33,0:33:93.11:0,93,883	0/0:19,0:18:54.09:0,54,521	0/0:12,0:12:30.05:0,30,290
chr10	33891641	.	A	AT	2445.53	PASS	AB=0.794;AC=18;AF=0.321;AN=56;BaseQRankSum=-7.898;DP=366;FS=2.330;HRun=10;HaplotypeScore=41.3431;InbreedingCoeff=0.8720;MQ=66.29;MQ0=4;MQRankSum=2.951;QD=20.21;ReadPosRankSum=0.685;VQSLOD=4.3424;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:50.80:0,51,405	0/0:13,0:13:35.96:0,36,296	0/0:11,0:8:14.93:0,15,118	0/1:9,0:8:2.18:2,0,53	1/1:5,11:16:33.04:340,33,0	1/1:3,7:10:18.04:190,18,0	1/1:1,10:11:24.06:256,24,0	0/0:17,0:16:35.93:0,36,296	1/1:1,10:11:27.07:288,27,0	0/0:16,0:16:32.94:0,33,269	0/0:13,0:13:32.95:0,33,271	1/1:1,8:9:21.05:224,21,0	0/0:10,0:10:26.93:0,27,217	0/0:10,0:10:20.98:0,21,172	0/1:3,7:10:0.58:200,0,1	0/0:4,0:4:11.97:0,12,95	1/1:5,15:20:42.11:448,42,0	0/0:12,0:12:4.54:0,5,153	0/0:14,0:14:29.93:0,30,242	0/0:15,0:14:32.94:0,33,271	0/0:19,0:19:41.91:0,42,340	0/0:14,0:15:40.90:0,41,316	1/1:4,9:13:30.07:319,30,0	1/1:0,12:12:36.09:384,36,0	0/0:13,0:13:29.96:0,30,246	0/0:15,0:15:41.95:0,42,345	0/0:18,0:18:44.91:0,45,365	0/0:6,0:6:14.96:0,15,123
chr10	33891987	.	CG	C	12611.51	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=5.242;DP=508;FS=2.392;HRun=1;HaplotypeScore=64.1124;InbreedingCoeff=0.9484;MQ=54.43;MQ0=46;MQRankSum=-2.627;QD=35.03;ReadPosRankSum=0.777;VQSLOD=4.8788;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:32:87.30:0,87,1387	1/1:0,5:5:15.05:210,15,0	0/0:6,0:5:1.58:0,2,69	0/0:5,0:4:10.85:0,11,148	0/0:20,0:20:57.18:0,57,887	0/0:18,0:18:48.16:0,48,765	0/0:16,0:12:33.11:0,33,519	1/1:2,24:23:66.14:879,66,0	0/0:25,0:24:63.21:0,63,1003	1/1:0,16:16:48.16:670,48,0	1/1:1,21:22:42.03:560,42,0	1/1:2,20:19:54.18:754,54,0	1/1:0,13:13:33.11:461,33,0	1/1:1,13:13:33.11:461,33,0	1/1:1,15:15:45.15:629,45,0	1/1:1,12:12:36.12:503,36,0	0/0:16,0:10:24.05:0,24,356	1/1:5,13:13:39.13:545,39,0	1/1:2,19:18:54.15:732,54,0	1/1:0,16:16:45.15:629,45,0	1/1:5,16:16:48.16:671,48,0	1/1:0,18:18:54.18:755,54,0	1/1:1,15:15:39.13:545,39,0	1/1:6,5:4:12.04:168,12,0	1/1:0,23:23:63.21:881,63,0	1/1:0,24:24:72.24:1007,72,0	1/1:3,29:29:72.24:1005,72,0	1/1:0,13:13:39.13:545,39,0
chr10	33892422	.	C	CTT	522.01	PASS	AB=0.909;AC=3;AF=0.054;AN=56;BaseQRankSum=6.055;DP=652;FS=3.847;HRun=0;HaplotypeScore=81.1664;InbreedingCoeff=0.6451;MQ=66.68;MQ0=0;MQRankSum=-6.072;QD=20.88;ReadPosRankSum=-0.856;VQSLOD=3.7390;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,14:15:36.04:600,36,0	0/0:11,0:11:33.11:0,33,538	0/0:13,0:11:21.03:0,21,293	0/0:11,0:10:24.08:0,24,370	0/0:21,0:21:63.20:0,63,1004	0/0:38,0:38:99:0,105,1708	0/0:23,0:23:69.20:0,69,1074	0/0:32,0:32:90.29:0,90,1407	0/0:23,0:23:69.24:0,69,1126	0/0:31,0:31:90.31:0,90,1466	0/0:25,0:25:72.23:0,72,1150	0/0:16,0:16:45.14:0,45,707	0/0:24,0:24:72.23:0,72,1148	0/0:26,0:26:75.26:0,75,1220	0/0:27,0:27:81.28:0,81,1320	0/0:20,0:20:60.20:0,60,979	0/0:19,0:19:51.15:0,51,805	0/0:22,0:22:63.19:0,63,988	0/0:17,0:16:48.16:0,48,782	0/0:32,0:32:96.31:0,96,1542	0/0:35,0:35:99:0,102,1638	0/0:32,0:32:93.30:0,93,1492	0/0:26,0:26:75.24:0,75,1198	0/0:15,0:15:42.14:0,42,685	0/0:31,0:31:93.30:0,93,1489	0/0:29,0:29:84.29:0,84,1369	0/0:28,0:28:84.29:0,84,1362	0/1:9,1:10:27.69:28,0,405
chr10	33892549	.	GT	G	858.03	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.624;DP=698;FS=4.742;HRun=5;HaplotypeScore=67.3733;InbreedingCoeff=0.9999;MQ=80.91;MQ0=0;MQRankSum=0.048;QD=26.00;ReadPosRankSum=0.974;VQSLOD=3.4581;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:62,0:62:99:0,184,2480	0/0:14,0:14:39.13:0,39,534	0/0:28,0:26:60.20:0,60,820	0/0:28,0:29:74.82:0,75,966	0/0:39,0:39:99:0,114,1513	0/0:20,0:20:54.11:0,54,685	0/0:17,0:17:48.14:0,48,638	0/0:22,0:22:63.20:0,63,849	0/0:24,0:24:63.21:0,63,862	0/0:32,0:32:87.29:0,87,1182	0/0:20,0:20:57.19:0,57,778	0/0:16,0:16:45.12:0,45,596	0/0:19,0:19:57.12:0,57,701	0/0:28,0:28:81.26:0,81,1094	1/1:3,30:33:84.24:953,84,0	0/0:14,0:14:42.11:0,42,541	0/0:30,0:30:84.24:0,84,1111	0/0:21,0:21:63.19:0,63,844	0/0:19,0:19:54.18:0,54,738	0/0:32,0:32:90.29:0,90,1215	0/0:36,0:36:93.29:0,93,1255	0/0:21,0:21:63.21:0,63,862	0/0:23,0:23:69.19:0,69,922	0/0:20,0:20:60.20:0,60,820	0/0:23,0:23:69.22:0,69,928	0/0:20,0:20:60.20:0,60,821	0/0:21,0:21:63.21:0,63,852	0/0:15,0:15:45.15:0,45,615
chr10	33893329	.	T	TA	4284.66	PASS	AC=32;AF=0.889;AN=36;BaseQRankSum=2.158;DP=189;FS=14.298;HRun=6;HaplotypeScore=40.3891;InbreedingCoeff=0.6789;MQ=62.25;MQ0=22;MQRankSum=-6.807;QD=28.00;ReadPosRankSum=5.514;VQSLOD=3.4718;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	1/1:0,7:7:21.07:264,21,0	0/0:19,0:15:45.04:0,45,446	0/0:8,0:3:8.99:0,9,82	1/1:3,13:15:30.10:377,30,0	1/1:2,3:3:9.03:113,9,0	./.	./.	./.	1/1:1,11:12:36.11:451,36,0	1/1:6,13:18:36.12:452,36,0	./.	1/1:1,2:3:6.02:75,6,0	./.	1/1:0,2:2:6.02:67,6,0	1/1:1,1:1:3.01:38,3,0	./.	1/1:0,1:1:3.01:38,3,0	./.	1/1:4,19:22:54.17:679,54,0	./.	1/1:3,9:12:24.08:302,24,0	1/1:2,9:10:21.07:264,21,0	./.	1/1:3,8:11:24.08:301,24,0	1/1:4,2:4:9.03:110,9,0	1/1:3,8:9:24.08:302,24,0	1/1:0,12:12:36.12:453,36,0
chr10	33895193	.	GA	G	4347.90	PASS	AB=0.665;AC=45;AF=0.900;AN=50;BaseQRankSum=-7.114;DP=184;FS=0.000;HRun=3;HaplotypeScore=33.8997;InbreedingCoeff=0.1080;MQ=70.82;MQ0=0;MQRankSum=-0.457;QD=24.43;ReadPosRankSum=1.863;VQSLOD=4.0199;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,10:14:22.59:300,23,0	1/1:0,1:1:3.01:37,3,0	0/1:6,2:8:46.97:47,0,108	0/0:5,0:5:5.45:0,5,83	1/1:0,7:7:5.85:74,6,0	1/1:3,9:12:16.50:286,17,0	1/1:3,12:15:25.27:363,25,0	1/1:2,8:10:24.07:296,24,0	1/1:4,10:14:23.39:355,23,0	1/1:1,6:7:15.27:218,15,0	1/1:1,4:5:10.43:145,10,0	1/1:2,8:10:10.98:246,11,0	1/1:0,3:3:6.02:74,6,0	1/1:0,1:1:3.01:37,3,0	0/1:2,6:8:6.14:199,0,6	1/1:0,3:3:3.01:37,3,0	1/1:0,6:6:6.02:74,6,0	1/1:0,3:3:6.02:72,6,0	1/1:0,6:6:18.06:222,18,0	1/1:2,7:9:19.63:257,20,0	0/1:2,3:5:3.83:65,0,4	1/1:1,3:4:1.39:101,1,0	1/1:1,8:9:21.06:249,21,0	./.	./.	1/1:2,6:8:17.72:222,18,0	1/1:0,10:10:30.09:371,30,0	./.
chr10	33897901	.	CGTGTGT	C	683.67	PASS	AB=0.867;AC=24;AF=0.522;AN=46;BaseQRankSum=-1.020;DP=630;FS=5.681;HRun=0;HaplotypeScore=117.2362;InbreedingCoeff=0.5222;MQ=63.78;MQ0=22;MQRankSum=-2.082;QD=2.48;ReadPosRankSum=1.068;VQSLOD=1.7316;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	0/0:24,0:24:27.09:0,27,636	0/0:15,0:15:12.04:0,12,300	0/0:35,0:35:21.07:0,21,515	0/0:23,0:23:4.57:0,5,11	0/0:18,0:17:6.02:0,6,159	1/1:16,1:19:8.76:107,9,0	0/1:7,2:10:0:0,0,0	0/0:8,0:10:3.01:0,3,78	1/1:15,4:19:2.43:59,2,0	1/1:10,6:16:3.01:60,3,0	0/0:20,0:20:24.08:0,24,584	1/1:10,4:17:12.04:185,12,0	0/1:27,0:28:5.80:6,0,738	1/1:21,7:27:3.01:60,3,0	./.	1/1:9,0:9:3.01:59,3,0	1/1:61,0:62:6.02:117,6,0	1/1:11,0:11:0.47:1,0,0	0/0:16,0:17:18.06:0,18,374	0/0:20,0:40:24:0,24,540	1/1:14,0:14:3.01:60,3,0	1/1:21,0:19:1.72:57,2,0	1/1:17,3:20:3:60,3,0	0/0:10,1:10:2.98:0,3,22
chr10	33897916	.	G	GTA	1013.08	PASS	AB=0.581;AC=7;AF=0.125;AN=56;BaseQRankSum=3.694;DP=702;FS=1.293;HRun=0;HaplotypeScore=86.9419;InbreedingCoeff=0.4311;MQ=55.12;MQ0=29;MQRankSum=2.512;QD=7.08;ReadPosRankSum=5.895;VQSLOD=3.0290;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:32.93:0,33,266	0/0:6,0:6:8.95:0,9,68	0/0:38,0:7:14.84:0,15,120	0/0:45,0:14:35.90:0,36,316	1/1:29,0:28:15.66:355,16,0	1/1:3,14:16:5.03:165,5,0	0/1:9,33:43:32.19:305,0,32	0/0:24,0:23:55.04:0,55,495	0/1:4,13:16:20.49:40,0,20	0/0:27,0:25:70.62:0,71,587	0/0:13,0:13:17.51:0,18,144	0/0:12,0:11:20.28:0,20,166	0/0:26,0:26:56.72:0,57,438	0/0:22,0:22:44.86:0,45,356	0/0:20,0:20:16.63:0,17,329	0/0:21,0:21:44.75:0,45,345	0/1:14,23:37:98.18:281,0,98	0/0:29,0:27:48.12:0,48,341	0/0:13,0:12:29.91:0,30,247	0/0:11,0:11:21.85:0,22,172	0/0:80,0:80:99:0,184,1480	0/0:16,0:15:32.92:0,33,264	0/0:15,0:15:21.78:0,22,276	0/0:46,0:46:41.66:0,42,465	0/0:16,0:16:32.94:0,33,270	0/0:22,0:20:59.23:0,59,487	0/0:19,0:19:50.66:0,51,377	0/0:15,0:14:38.87:0,39,305
chr10	33898223	.	GA	G	319.41	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.286;DP=525;FS=4.415;HRun=2;HaplotypeScore=82.1570;InbreedingCoeff=0.9941;MQ=90.30;MQ0=0;MQRankSum=-6.549;QD=14.52;ReadPosRankSum=-1.381;VQSLOD=2.7426;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:69.20:0,69,991	0/0:12,0:12:36.09:0,36,500	0/0:22,0:22:63.16:0,63,865	0/0:24,0:24:59.82:0,60,806	0/0:20,0:20:53.87:0,54,628	0/0:17,0:17:51.11:0,51,691	0/0:30,0:30:90.26:0,90,1281	0/0:29,0:29:81.25:0,81,1158	0/0:18,0:18:54.18:0,54,809	0/0:26,0:26:78.26:0,78,1146	0/0:18,0:18:51.09:0,51,699	0/0:15,0:15:45.14:0,45,654	0/0:21,0:21:63.21:0,63,935	0/0:18,0:18:51.17:0,51,761	1/1:4,18:22:56.66:414,57,0	0/0:18,0:18:51.17:0,51,764	0/0:21,0:21:57.19:0,57,849	0/0:7,0:7:21.07:0,21,308	0/0:18,0:18:47.67:0,48,617	0/0:9,0:9:27.08:0,27,377	0/0:24,0:24:72.23:0,72,1057	0/0:10,0:10:30:0,30,387	0/0:15,0:15:45.10:0,45,638	0/0:21,0:21:63.17:0,63,882	0/0:14,0:14:39.09:0,39,558	0/0:20,0:20:60.20:0,60,895	0/0:20,0:20:60.18:0,60,870	0/0:12,0:12:36.12:0,36,530
chr10	33898226	.	CCGCCA	C	611.84	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.280;DP=534;FS=3.055;HRun=0;HaplotypeScore=121.9863;InbreedingCoeff=0.9947;MQ=91.18;MQ0=0;MQRankSum=-6.480;QD=32.20;ReadPosRankSum=-1.645;VQSLOD=3.1460;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:75.26:0,75,2452	0/0:11,0:11:33.07:0,33,1016	0/0:23,0:23:65.21:0,65,1807	0/0:25,0:25:66.20:0,66,1755	0/0:19,0:19:45.15:0,45,1389	0/0:18,0:18:54.17:0,54,1712	0/0:27,0:27:81.21:0,81,2383	0/0:32,0:32:93.31:0,93,2913	0/0:18,0:18:54.19:0,54,1690	0/0:28,0:28:84.24:0,84,2500	0/0:18,0:18:45.11:0,45,1367	0/0:15,0:15:45.15:0,45,1483	0/0:21,0:21:63.22:0,63,2058	0/0:19,0:19:57.17:0,57,1742	1/1:1,18:19:57.17:707,57,0	0/0:17,0:17:51.18:0,51,1670	0/0:21,0:21:60.21:0,60,1989	0/0:7,0:7:21.07:0,21,699	0/0:17,0:17:51.16:0,51,1585	0/0:10,0:10:30.09:0,30,885	0/0:24,0:24:69.21:0,69,2129	0/0:13,0:13:33.11:0,33,1080	0/0:17,0:17:51.16:0,51,1587	0/0:19,0:19:57.18:0,57,1754	0/0:14,0:14:39.13:0,39,1256	0/0:25,0:25:75.26:0,75,2424	0/0:20,0:20:60.21:0,60,1995	0/0:12,0:12:36.11:0,36,1119
chr10	33898232	.	TG	T	325.25	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.120;DP=530;FS=4.582;HRun=1;HaplotypeScore=80.8067;InbreedingCoeff=0.9940;MQ=91.99;MQ0=0;MQRankSum=-6.854;QD=18.07;ReadPosRankSum=-1.115;VQSLOD=3.5402;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:75.26:0,75,1194	0/0:11,0:11:33.11:0,33,526	0/0:24,0:25:69.18:0,69,1049	0/0:24,0:24:63.20:0,63,928	0/0:17,0:17:42.13:0,42,636	0/0:17,0:17:51.17:0,51,815	0/0:23,0:23:69.24:0,69,1102	0/0:35,0:35:99:0,102,1547	0/0:17,0:17:51.14:0,51,765	0/0:28,0:28:84.02:0,84,1258	0/0:16,0:16:39.13:0,39,607	0/0:16,0:16:48.15:0,48,744	0/0:21,0:21:63.15:0,63,976	0/0:19,0:19:54.18:0,54,863	1/1:1,17:18:53.80:420,54,0	0/0:19,0:19:57.19:0,57,907	0/0:23,0:23:66.22:0,66,1051	0/0:7,0:7:21.07:0,21,334	0/0:19,0:19:57.19:0,57,907	0/0:9,0:9:27.01:0,27,375	0/0:23,0:23:66.20:0,66,1020	0/0:13,0:13:33.11:0,33,525	0/0:18,0:18:51.17:0,51,802	0/0:16,0:16:48.16:0,48,767	0/0:13,0:13:36.12:0,36,565	0/0:26,0:26:75.26:0,75,1192	0/0:20,0:20:60.19:0,60,936	0/0:11,0:11:33.11:0,33,525
chr10	33898501	.	A	AGCAGCCCGAAGAGCCA	1495.05	PASS	AB=0.701;AC=14;AF=0.875;AN=16;BaseQRankSum=-2.585;DP=39;FS=14.018;HRun=0;HaplotypeScore=28.7159;MQ=165.55;MQ0=0;MQRankSum=-1.567;QD=57.50;ReadPosRankSum=-2.115;VQSLOD=0.9963;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/1:6,1:11:25.95:1043,0,26	0/1:3,0:5:40.91:197,0,41	./.	./.	./.	1/1:2,0:2:6.02:111,6,0	./.	./.	./.	./.	./.	./.	./.	./.	./.	1/1:2,0:2:3.01:49,3,0	1/1:1,0:1:3.01:69,3,0	1/1:1,0:1:3.01:40,3,0	1/1:2,0:2:3.01:42,3,0	./.	1/1:2,0:2:3:25,3,0	./.	./.	./.	./.	./.
chr10	33900427	.	AT	A	6182.35	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=16.369;DP=455;FS=30.977;HRun=3;HaplotypeScore=74.6509;InbreedingCoeff=0.9948;MQ=84.06;MQ0=0;MQRankSum=1.174;QD=30.61;ReadPosRankSum=6.137;VQSLOD=2.7492;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,28:28:69.22:853,69,0	0/0:10,0:10:27.04:0,27,364	0/0:17,0:16:22.11:0,22,464	0/0:17,0:17:27.92:0,28,532	1/1:0,20:20:48.08:575,48,0	1/1:0,14:14:36.11:445,36,0	1/1:1,10:11:21.07:260,21,0	0/0:28,0:28:78.24:0,78,1087	1/1:1,19:20:48.15:594,48,0	0/0:18,0:18:51.14:0,51,728	0/0:11,0:11:30.10:0,30,429	1/1:0,14:14:39.12:483,39,0	0/0:14,0:14:42.05:0,42,544	0/0:12,0:12:33:0,33,427	1/1:1,16:17:39.12:481,39,0	0/0:14,0:14:42.13:0,42,586	1/1:0,33:33:75.24:926,75,0	0/0:5,0:5:15.05:0,15,214	0/0:17,0:17:51.09:0,51,646	0/0:18,0:18:45.04:0,45,596	0/0:7,0:7:21.07:0,21,301	0/0:11,0:11:30.09:0,30,411	1/1:0,28:28:84.22:1016,84,0	1/1:0,17:17:45.14:548,45,0	0/0:12,0:12:36.05:0,36,472	0/0:16,0:16:42.12:0,42,570	0/0:19,0:19:54.12:0,54,733	0/0:7,0:7:21.06:0,21,282
chr10	33900554	.	CA	C	6502.96	PASS	AB=0.871;AC=33;AF=0.589;AN=56;BaseQRankSum=-11.994;DP=557;FS=6.733;HRun=10;HaplotypeScore=78.4294;InbreedingCoeff=0.9189;MQ=84.18;MQ0=0;MQRankSum=-0.507;QD=20.45;ReadPosRankSum=-0.268;VQSLOD=5.4940;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:32:65.82:0,66,332	1/1:0,7:7:20.97:177,21,0	0/1:23,4:25:46.61:47,0,272	0/0:13,0:13:12.25:0,12,206	0/0:31,0:31:72.19:0,72,796	0/0:12,0:13:29.91:0,30,313	0/0:13,0:13:36.10:0,36,398	1/1:3,25:28:74.93:640,75,0	0/0:20,0:20:51.12:0,51,555	1/1:1,22:23:65.97:569,66,0	1/1:4,21:25:57.86:496,58,0	0/0:23,0:23:56.96:0,57,589	1/1:1,19:20:47.99:417,48,0	1/1:3,14:17:41.99:365,42,0	0/0:5,0:20:34.47:0,34,174	1/1:5,11:16:29.98:260,30,0	0/0:21,0:22:63:0,63,677	1/1:2,12:14:35.99:313,36,0	1/1:2,12:14:35.98:311,36,0	1/1:1,35:36:99:884,102,0	1/1:0,6:6:15:130,15,0	1/1:0,16:16:44.99:391,45,0	0/0:33,0:33:78.19:0,78,841	0/0:19,0:19:48.13:0,48,530	1/1:2,18:20:44.99:391,45,0	1/1:2,17:19:50.96:436,51,0	1/1:1,16:17:44.99:391,45,0	1/1:1,12:13:32.99:286,33,0
chr10	33900768	.	C	CT	11125.76	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-16.974;DP=642;FS=5.053;HRun=0;HaplotypeScore=59.6850;InbreedingCoeff=0.9976;MQ=92.63;MQ0=0;MQRankSum=-3.754;QD=44.68;ReadPosRankSum=3.413;VQSLOD=5.1429;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,31:31:81.28:1295,81,0	0/0:8,0:8:24.08:0,24,336	0/0:26,0:26:72.23:0,72,970	0/0:29,0:29:77.84:0,78,1027	1/1:1,32:33:93.32:1487,93,0	1/1:0,24:24:66.23:1055,66,0	1/1:0,21:21:60.20:960,60,0	0/0:28,0:28:78.26:0,78,1090	1/1:0,28:28:78.27:1247,78,0	0/0:30,0:30:87.29:0,87,1215	0/0:22,0:22:66.21:0,66,907	1/1:0,18:18:51.04:814,51,0	0/0:26,0:26:78.26:0,78,1091	0/0:23,0:23:69.23:0,69,965	1/1:1,34:35:99:1631,102,0	0/0:22,1:23:18.24:0,18,827	1/1:0,15:15:42.14:671,42,0	0/0:8,0:8:21.07:0,21,292	0/0:28,0:28:84.26:0,84,1150	0/0:26,0:26:78.25:0,78,1071	0/0:18,0:18:54.15:0,54,720	0/0:17,0:17:51.17:0,51,713	1/1:0,31:31:84.28:1342,84,0	1/1:0,13:13:39.13:623,39,0	0/0:19,0:19:57.18:0,57,782	0/0:28,0:28:84.28:0,84,1175	0/0:26,0:26:75.25:0,75,1047	0/0:8,0:8:24.08:0,24,336
chr10	33901984	.	T	TG	5158.63	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=2.742;DP=526;FS=5.984;HRun=6;HaplotypeScore=62.2579;InbreedingCoeff=0.9936;MQ=84.36;MQ0=0;MQRankSum=-3.776;QD=27.15;ReadPosRankSum=3.022;VQSLOD=5.4768;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,23:28:54.16:679,54,0	0/0:12,0:12:36.08:0,36,367	0/0:27,0:25:56.93:0,57,558	0/0:21,0:20:43.53:0,44,401	1/1:1,31:32:80.19:1017,80,0	1/1:4,8:12:24.08:302,24,0	1/1:4,18:22:45.13:566,45,0	0/0:16,0:16:42.09:0,42,429	1/1:1,16:17:42.13:528,42,0	0/0:22,0:22:42.08:0,42,428	0/0:21,0:21:54.07:0,54,541	1/1:1,21:22:51.16:642,51,0	0/0:18,0:18:51.12:0,51,520	0/0:18,0:18:51.11:0,51,520	1/1:1,17:18:45.14:566,45,0	0/0:18,1:19:16.37:0,16,476	1/1:3,17:20:33.11:415,33,0	0/0:14,0:14:39.09:0,39,397	0/0:15,0:15:39.08:0,39,395	0/0:23,0:23:45.09:0,45,459	0/0:21,0:21:57.13:0,57,582	0/0:21,0:21:57.10:0,57,565	1/1:3,5:8:15.05:189,15,0	1/1:3,8:11:21.06:255,21,0	0/0:26,0:26:60.13:0,60,611	0/0:14,0:14:33.06:0,33,336	0/0:22,0:22:63.14:0,63,642	0/0:6,0:6:18.04:0,18,184
chr10	33902105	.	T	TCTCGG	21847.26	PASS	AB=0.964;AC=21;AF=0.375;AN=56;BaseQRankSum=-12.930;DP=697;FS=2.890;HRun=0;HaplotypeScore=121.1236;InbreedingCoeff=0.9266;MQ=87.98;MQ0=0;MQRankSum=-10.019;QD=71.87;ReadPosRankSum=1.569;VQSLOD=6.6310;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,41:50:99:4083,135,0	0/0:11,0:11:33.10:0,33,643	0/0:31,0:31:90.31:0,90,1889	0/0:30,0:30:81.27:0,81,1655	1/1:5,20:26:61.92:1854,62,0	1/1:1,11:12:36.11:1069,36,0	1/1:5,22:28:78.27:2375,78,0	0/0:22,0:22:63.20:0,63,1280	1/1:7,21:28:81.26:2377,81,0	0/0:33,0:33:90.30:0,90,1883	0/0:16,0:16:45.15:0,45,961	1/1:3,23:27:75.26:2301,75,0	0/0:12,0:12:36.12:0,36,766	0/0:21,0:21:60.21:0,60,1302	1/1:8,23:31:90.12:2571,90,0	0/1:26,1:27:13.92:14,0,1501	1/1:10,23:33:87.17:2427,87,0	0/0:24,0:24:69.24:0,69,1498	0/0:19,0:19:54.16:0,54,1071	0/0:31,0:31:87.25:0,87,1752	0/0:38,0:38:99:0,111,2368	0/0:29,0:29:87.30:0,87,1872	1/1:9,10:19:42.14:1233,42,0	1/1:3,18:23:51.60:1542,52,0	0/0:16,0:16:48.15:0,48,959	0/0:19,0:19:54.19:0,54,1172	0/0:28,0:28:81.28:0,81,1752	0/0:13,0:13:36.12:0,36,781
chr10	33902194	.	CT	C	10965.40	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=16.574;DP=682;FS=1.258;HRun=1;HaplotypeScore=76.9630;InbreedingCoeff=0.9940;MQ=86.88;MQ0=0;MQRankSum=-3.228;QD=37.68;ReadPosRankSum=2.928;VQSLOD=5.5493;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,55:55:99:2095,151,0	0/0:4,0:4:12.04:0,12,188	0/0:25,0:25:75.23:0,75,1126	0/0:23,0:23:66.10:0,66,930	1/1:0,13:13:30.10:418,30,0	1/1:0,14:14:33.11:461,33,0	1/1:0,35:35:96.32:1340,96,0	0/0:21,0:21:63.21:0,63,967	1/1:0,36:36:99:1361,99,0	0/0:25,0:25:72.24:0,72,1127	0/0:9,0:9:27.08:0,27,400	1/1:0,28:28:81.27:1132,81,0	0/0:20,0:20:60.19:0,60,915	0/0:22,0:22:63.20:0,63,962	1/1:0,35:35:96.25:1317,96,0	0/0:32,0:32:96.31:0,96,1480	1/1:0,37:37:99:1379,99,0	0/0:29,0:29:87.25:0,87,1309	0/0:30,0:30:90.28:0,90,1347	0/0:27,0:27:81.15:0,81,1213	0/0:42,0:42:99:0,126,1924	0/0:18,0:18:54.18:0,54,845	1/1:0,20:20:60.20:834,60,0	1/1:0,18:18:45.15:629,45,0	0/0:14,0:14:39.13:0,39,610	0/0:24,0:24:72.23:0,72,1089	0/0:20,0:20:57.18:0,57,869	0/0:6,0:6:18.06:0,18,282
chr10	33903504	.	AG	A	4050.11	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=11.642;DP=714;FS=0.000;HRun=5;HaplotypeScore=66.5711;InbreedingCoeff=0.9928;MQ=69.09;MQ0=0;MQRankSum=-0.567;QD=29.35;ReadPosRankSum=0.890;VQSLOD=3.9159;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,132,1804	0/0:15,0:15:39.13:0,39,533	0/0:15,0:15:44.98:0,45,542	0/0:6,0:6:12.04:0,12,153	1/1:3,31:34:93.26:1055,93,0	1/1:1,24:25:66.19:749,66,0	1/1:3,23:26:66.19:749,66,0	0/0:27,0:27:75.24:0,75,1012	1/1:7,20:27:57.16:647,57,0	0/0:39,0:39:99:0,114,1496	0/0:32,0:32:90.29:0,90,1214	0/0:20,0:20:60.20:0,60,820	0/0:27,0:27:72.23:0,72,969	0/0:17,0:17:51.17:0,51,698	0/0:32,0:32:87.26:0,87,1157	0/0:22,0:22:57.16:0,57,748	1/1:0,26:26:75.21:851,75,0	0/0:12,0:12:33.11:0,33,451	0/0:26,0:26:63.21:0,63,862	0/0:32,0:32:90.29:0,90,1214	0/0:27,0:27:81.27:0,81,1107	0/0:29,0:29:84.28:0,84,1148	0/0:26,0:26:72.22:0,72,953	0/0:24,0:24:72.24:0,72,984	0/0:26,0:26:75.25:0,75,1018	0/0:31,0:31:87.25:0,87,1169	0/0:34,0:34:87.29:0,87,1179	0/0:12,0:12:36.12:0,36,492
chr10	33903869	.	C	CT	326.21	PASS	AB=0.938;AC=3;AF=0.054;AN=56;BaseQRankSum=-2.200;DP=566;FS=0.000;HRun=10;HaplotypeScore=68.4582;InbreedingCoeff=0.4893;MQ=69.46;MQ0=2;MQRankSum=-0.064;QD=9.32;ReadPosRankSum=-0.625;VQSLOD=2.1810;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:48.32:0,48,521	0/0:5,0:5:8.98:0,9,74	0/0:29,0:19:8.62:0,9,107	0/0:23,0:14:13.74:0,14,125	0/0:23,0:23:53.93:0,54,443	0/0:20,0:21:52.88:0,53,412	0/0:15,1:16:6.93:0,7,263	0/0:23,0:23:41.60:0,42,344	0/0:16,0:16:35.92:0,36,294	0/0:30,1:31:47.90:0,48,583	0/0:23,0:22:50.92:0,51,418	0/0:17,0:17:41.94:0,42,344	0/0:14,0:14:29.95:0,30,246	0/0:24,0:24:53.85:0,54,438	1/1:2,18:20:39.10:416,39,0	0/0:17,0:17:47.93:0,48,394	0/0:29,0:29:71.83:0,72,581	0/0:14,0:15:34.99:0,35,277	0/0:25,0:25:1.66:0,2,378	0/0:24,0:25:58.94:0,59,474	0/0:8,0:8:23.97:0,24,197	0/0:13,0:13:32.96:0,33,271	0/0:25,0:25:56.91:0,57,465	0/0:15,0:15:38.95:0,39,320	0/0:22,0:22:59.92:0,60,493	0/0:20,0:20:52.96:0,53,424	0/0:22,0:22:53.84:0,54,436	0/1:14,1:15:14.02:14,0,105
chr10	33903957	.	C	CGACT	1496.60	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-5.600;DP=505;FS=3.081;HRun=0;HaplotypeScore=81.1284;InbreedingCoeff=0.9786;MQ=69.64;MQ0=0;MQRankSum=-4.870;QD=57.56;ReadPosRankSum=0.843;VQSLOD=5.1569;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,22:26:60.21:1591,60,0	0/0:5,0:5:15.02:0,15,246	0/0:13,0:13:32.89:0,33,615	0/0:19,0:19:39.78:0,40,858	0/0:23,0:23:69.23:0,69,1255	0/0:22,0:22:63.22:0,63,1176	0/0:17,0:17:45.14:0,45,798	0/0:28,0:28:69.19:0,69,1156	0/0:12,0:12:36.09:0,36,608	0/0:18,0:17:54.19:0,54,1005	0/0:13,0:13:33.11:0,33,616	0/0:13,0:13:36.11:0,36,629	0/0:19,0:19:54.16:0,54,974	0/0:16,0:16:45.15:0,45,831	0/0:21,0:21:57.20:0,57,1064	0/0:19,0:19:51.17:0,51,916	0/0:32,0:32:90.25:0,90,1611	0/0:21,0:21:60.21:0,60,1119	0/0:10,0:10:27.09:0,27,504	0/0:18,0:18:51.17:0,51,944	0/0:24,0:24:69.22:0,69,1248	0/0:18,0:18:51.17:0,51,951	0/0:9,0:9:24.07:0,24,417	0/0:16,0:16:48.15:0,48,865	0/0:13,0:13:36.12:0,36,672	0/0:22,0:22:60.21:0,60,1092	0/0:30,0:30:87.29:0,87,1566	0/0:8,0:8:24.06:0,24,385
chr10	33905307	.	TTTTG	T	9163.25	PASS	AB=0.972;AC=33;AF=0.589;AN=56;BaseQRankSum=5.967;DP=647;FS=4.931;HRun=0;HaplotypeScore=117.8483;InbreedingCoeff=0.9177;MQ=60.55;MQ0=4;MQRankSum=0.386;QD=25.96;ReadPosRankSum=-0.118;VQSLOD=4.3684;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,1:44:38.41:0,38,1830	1/1:2,6:8:18.06:293,18,0	0/1:34,1:20:17.08:17,0,504	0/0:28,0:16:18.53:0,19,409	0/0:25,0:25:60.21:0,60,1443	0/0:34,0:34:69.24:0,69,1641	0/0:28,0:28:60.21:0,60,1419	1/1:12,21:33:63.16:956,63,0	0/0:20,1:21:11.35:0,11,1283	1/1:9,26:35:77.47:1195,77,0	1/1:5,11:16:33.07:508,33,0	0/0:4,0:21:50.66:0,51,844	1/1:4,16:20:30.10:488,30,0	1/1:2,12:14:30.10:488,30,0	0/0:4,0:18:29.89:0,30,526	1/1:8,17:25:42.14:684,42,0	0/0:25,0:25:49.57:0,50,1427	1/1:8,13:21:18.13:565,18,0	1/1:9,13:21:39.13:635,39,0	1/1:10,14:24:42.14:684,42,0	1/1:7,7:14:21.07:342,21,0	1/1:2,12:14:30.06:459,30,0	0/0:7,0:21:40.90:0,41,708	0/0:7,0:29:66.22:0,66,1152	1/1:5,11:16:24.08:391,24,0	1/1:7,10:17:30.10:480,30,0	1/1:11,19:30:36.12:586,36,0	1/1:1,8:9:24.08:391,24,0
chr10	33905686	.	AGCAC	A	4869.78	PASS	AB=1.000;AC=42;AF=0.750;AN=56;BaseQRankSum=-4.841;DP=398;FS=12.487;HRun=0;HaplotypeScore=74.6726;InbreedingCoeff=0.1679;MQ=72.53;MQ0=9;MQRankSum=-0.800;QD=14.58;ReadPosRankSum=1.263;VQSLOD=3.2115;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,23:24:8.06:117,8,0	1/1:2,0:2:2.39:12,2,0	0/0:28,0:15:34.03:0,34,311	0/0:27,0:19:31.87:0,32,288	0/1:13,0:13:99:160,0,107	0/1:12,0:12:45.99:135,0,46	1/1:14,0:13:17.95:145,18,0	1/1:11,0:11:27:242,27,0	0/1:12,0:12:65.46:143,0,65	1/1:14,3:16:36.06:419,36,0	1/1:7,0:7:15.94:141,16,0	0/1:5,0:5:24.93:25,0,62	0/1:13,0:12:29.60:191,0,30	1/1:11,0:11:13.40:104,13,0	1/1:12,1:13:24.92:231,25,0	1/1:10,0:10:18.87:147,19,0	0/1:25,0:25:99:128,0,306	1/1:13,0:13:23.73:191,24,0	1/1:9,2:11:30.47:322,30,0	1/1:17,1:18:43.91:341,44,0	1/1:23,0:23:51.77:404,52,0	0/1:9,0:9:59.64:101,0,60	0/0:9,0:9:6.21:0,6,92	0/1:20,0:20:99:241,0,161	1/1:11,0:11:16.27:121,16,0	1/1:14,0:14:17.33:238,17,0	1/1:18,4:21:51.37:522,51,0	1/1:4,0:4:5.99:49,6,0
chr10	33905687	.	G	GCA	688.03	PASS	AB=0.983;AC=22;AF=0.407;AN=54;BaseQRankSum=-3.531;DP=403;FS=5.017;HRun=0;HaplotypeScore=81.9714;InbreedingCoeff=0.0186;MQ=71.46;MQ0=9;MQRankSum=1.068;QD=2.98;ReadPosRankSum=-0.559;VQSLOD=1.5796;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:24:5.60:0,6,25	0/0:2,0:2:5.34:0,5,22	0/0:28,0:15:41.75:0,42,498	0/0:26,0:18:27.11:0,27,464	1/1:16,0:16:9.12:64,9,0	1/1:9,2:12:2.78:87,3,0	0/0:11,4:14:0.72:0,1,2	1/1:12,0:12:2.48:31,2,0	1/1:15,0:15:5.46:50,5,0	0/1:16,0:15:24.70:29,0,25	0/0:6,0:7:8.10:0,8,35	0/1:4,1:5:24.65:35,0,25	0/1:14,0:13:16.30:16,0,23	0/1:11,0:11:14.44:14,0,22	0/0:13,0:13:11.41:0,11,44	0/1:10,0:10:14.01:18,0,14	1/1:16,8:24:0.18:364,0,0	0/0:13,0:13:9.71:0,10,43	0/1:11,0:11:21.58:30,0,22	0/0:18,0:18:7.18:0,7,24	0/1:22,0:22:8.19:59,0,8	1/1:10,0:10:1.77:23,2,0	0/0:9,0:9:8.63:0,9,53	0/1:21,0:21:7.45:7,0,77	0/1:11,0:11:9.61:10,0,34	0/0:13,0:13:0.59:0,1,6	0/1:21,0:20:2.42:2,0,62	./.
chr10	33905689	.	ACG	A	6381.65	PASS	AB=0.920;AC=47;AF=0.839;AN=56;BaseQRankSum=-4.379;DP=414;FS=4.710;HRun=0;HaplotypeScore=62.3434;InbreedingCoeff=0.2968;MQ=68.58;MQ0=11;MQRankSum=0.738;QD=17.63;ReadPosRankSum=0.781;VQSLOD=4.0350;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:24:5.98:47,6,0	1/1:1,1:2:5.81:57,6,0	0/0:28,0:15:34.03:0,34,311	0/0:24,0:16:31.87:0,32,288	1/1:16,0:16:12.87:204,13,0	1/1:12,0:12:13.65:155,14,0	1/1:14,0:13:17.95:145,18,0	1/1:12,0:11:16.95:229,17,0	1/1:15,0:15:6.48:197,6,0	1/1:20,0:18:41.93:363,42,0	1/1:5,2:7:21:215,21,0	0/1:6,0:6:11.98:27,0,12	1/1:14,1:14:19.76:300,20,0	1/1:7,3:10:21.02:237,21,0	1/1:10,4:14:35.97:354,36,0	1/1:7,3:10:29.95:304,30,0	0/1:24,0:24:28.93:184,0,29	1/1:11,3:14:38.89:367,39,0	1/1:10,1:11:32.97:302,33,0	1/1:17,1:18:36.35:393,36,0	1/1:20,2:22:56.85:492,57,0	0/1:12,0:12:5.79:143,0,6	0/1:3,6:9:26.50:51,0,26	0/1:21,0:21:32.34:330,0,32	1/1:7,5:12:27.04:325,27,0	1/1:14,1:15:41.95:378,42,0	1/1:18,4:21:51.86:510,52,0	1/1:5,0:5:8.98:73,9,0
chr10	33905755	.	T	TA	8140.98	PASS	AB=0.749;AC=44;AF=0.786;AN=56;BaseQRankSum=-8.321;DP=485;FS=17.964;HRun=10;HaplotypeScore=61.9313;InbreedingCoeff=0.8260;MQ=69.43;MQ0=1;MQRankSum=-2.994;QD=21.04;ReadPosRankSum=2.348;VQSLOD=3.9589;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:55.73:0,56,448	1/1:3,7:9:18.05:192,18,0	0/0:23,0:18:34.90:0,35,273	0/1:13,1:12:1.78:2,0,143	1/1:1,13:14:33.08:352,33,0	1/1:4,12:18:35.76:348,36,0	0/1:3,10:13:16.19:245,0,16	1/1:4,19:23:32.45:528,32,0	1/1:3,7:10:15.04:158,15,0	1/1:4,17:21:48.12:511,48,0	1/1:7,12:19:33.08:349,33,0	0/0:11,0:11:26.93:0,27,215	1/1:2,13:15:33.08:351,33,0	1/1:4,8:12:24.06:256,24,0	1/1:0,11:11:33.08:352,33,0	1/1:3,12:15:27.06:281,27,0	1/1:4,18:22:57.12:599,57,0	1/1:7,14:21:39.02:401,39,0	1/1:4,15:19:41.95:420,42,0	1/1:3,20:23:56.98:590,57,0	1/1:3,14:17:36.09:384,36,0	1/1:3,15:18:13.17:331,13,0	0/0:18,0:18:44.93:0,45,369	0/0:19,0:20:43.92:0,44,345	1/1:10,18:28:23.47:453,23,0	1/1:4,12:18:41.87:415,42,0	1/1:3,11:15:32.92:334,33,0	1/1:2,9:11:27.07:288,27,0
chr10	33906156	.	CT	C	3808.29	PASS	AB=0.765;AC=52;AF=0.929;AN=56;BaseQRankSum=0.088;DP=550;FS=2.751;HRun=13;HaplotypeScore=72.4221;InbreedingCoeff=0.3260;MQ=62.31;MQ0=12;MQRankSum=2.078;QD=7.04;ReadPosRankSum=4.222;VQSLOD=2.7674;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:57:77.38:227,77,0	1/1:4,6:10:1.40:98,1,0	0/0:9,0:8:2.99:0,3,23	0/1:9,1:7:0:0,0,0	1/1:4,0:17:21.99:64,22,0	1/1:7,0:17:14.23:41,14,0	1/1:2,2:13:24.30:97,24,0	1/1:18,20:38:36.58:403,37,0	1/1:4,0:22:24.21:70,24,0	1/1:17,8:25:22.29:157,22,0	1/1:5,14:20:34.78:246,35,0	1/1:3,0:11:1.68:15,2,0	1/1:1,8:9:17.89:131,18,0	1/1:4,11:15:23.80:175,24,0	1/1:1,0:17:21.61:63,22,0	1/1:7,9:17:25.83:181,26,0	1/1:8,0:21:28.50:82,28,0	1/1:8,4:12:3.88:96,4,0	1/1:7,12:19:4.68:175,5,0	0/1:7,11:17:20.62:164,0,21	1/1:7,5:13:13.95:93,14,0	1/1:2,11:13:26.80:196,27,0	1/1:5,0:23:25.80:75,26,0	1/1:7,0:33:22.76:95,23,0	1/1:6,13:20:34.80:246,35,0	1/1:12,12:25:33.72:228,34,0	1/1:6,18:24:19.58:280,20,0	1/1:1,5:5:14.91:109,15,0
chr10	33907152	.	TTTCTTCCAGGA	T	22575.08	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=17.286;DP=510;FS=0.000;HRun=0;HaplotypeScore=194.1427;InbreedingCoeff=0.9875;MQ=68.96;MQ0=0;MQRankSum=-17.366;QD=94.85;ReadPosRankSum=0.709;VQSLOD=4.7663;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,111,6019	1/1:0,4:4:12.04:445,12,0	0/0:14,0:14:41.88:0,42,1449	0/0:12,0:12:36.11:0,36,1345	0/0:26,0:26:75.26:0,75,4198	0/0:21,0:21:63.22:0,63,3556	0/0:25,0:25:75.26:0,75,4324	1/1:0,10:10:30.08:945,30,0	0/0:32,0:32:96.33:0,96,5226	1/1:0,23:23:63.22:2343,63,0	1/1:0,23:23:57.20:2051,57,0	0/0:25,0:25:75.25:0,75,3982	1/1:1,18:19:48.16:1781,48,0	1/1:0,9:9:21.07:780,21,0	1/1:0,13:13:27.09:989,27,0	1/1:0,14:14:39.13:1452,39,0	0/0:37,0:37:99:0,111,6075	1/1:0,6:6:12.04:447,12,0	1/1:1,14:15:45.14:1531,45,0	1/1:0,25:25:60.21:2227,60,0	1/1:0,9:9:21.07:759,21,0	1/1:0,17:17:39.13:1449,39,0	0/0:25,0:25:75.26:0,75,4293	0/0:18,0:18:54.19:0,54,3164	1/1:0,16:16:45.15:1673,45,0	1/1:0,14:14:42.14:1473,42,0	1/1:0,16:16:45.15:1673,45,0	1/1:0,5:5:15.05:559,15,0
chr10	33908854	.	T	TG	2277.14	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=11.719;DP=658;FS=1.094;HRun=1;HaplotypeScore=73.5552;InbreedingCoeff=0.9998;MQ=89.10;MQ0=0;MQRankSum=-2.864;QD=37.95;ReadPosRankSum=0.709;VQSLOD=4.1209;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:60.20:0,60,779	0/0:10,0:10:30.10:0,30,388	0/0:28,0:28:81.16:0,81,993	0/0:20,0:20:54.14:0,54,658	0/0:22,0:22:63.19:0,63,804	0/0:37,0:37:99:0,99,1286	0/0:22,0:22:54.13:0,54,682	0/0:41,0:41:99:0,120,1530	0/0:27,0:27:81.25:0,81,1037	0/0:21,0:20:60.16:0,60,748	0/0:20,0:20:54.17:0,54,700	1/1:2,23:25:72.16:1029,72,0	0/0:25,0:25:75.24:0,75,974	0/0:19,0:19:57.18:0,57,738	0/0:22,0:22:63.20:0,63,818	0/0:23,0:23:69.21:0,69,881	0/0:25,0:25:72.22:0,72,920	0/0:15,0:15:45.15:0,45,584	0/0:23,0:23:66.21:0,66,845	0/0:30,0:30:87.25:0,87,1089	0/0:17,0:17:51.16:0,51,654	0/0:28,0:28:84.27:0,84,1091	1/1:1,21:22:57.19:853,57,0	1/1:0,13:13:36.12:539,36,0	0/0:25,0:25:75.24:0,75,974	0/0:26,0:26:78.25:0,78,1001	0/0:33,0:33:99:0,99,1282	0/0:16,0:16:45.15:0,45,579
chr10	33910630	.	T	TTGTG	4154.27	PASS	AB=0.810;AC=41;AF=0.854;AN=48;BaseQRankSum=-1.169;DP=655;FS=10.629;HRun=0;HaplotypeScore=129.2719;InbreedingCoeff=-0.0626;MQ=64.65;MQ0=15;MQRankSum=0.918;QD=7.76;ReadPosRankSum=-1.634;VQSLOD=1.8325;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:18,8:28:6.02:125,6,0	1/1:9,3:13:8.65:209,9,0	./.	./.	./.	1/1:15,5:21:3.01:70,3,0	0/0:21,2:26:1.93:0,2,20	1/1:24,0:23:1.25:3,1,0	1/1:16,6:24:15.05:352,15,0	1/1:23,0:23:20.27:267,20,0	1/1:13,6:23:6:139,6,0	1/1:16,7:25:22.33:388,22,0	0/1:13,1:21:70.12:89,0,70	1/1:15,3:24:3.01:52,3,0	1/1:21,2:30:2.55:69,3,0	0/1:7,5:15:28.95:64,0,29	1/1:7,4:17:15.77:238,16,0	1/1:19,4:24:11.88:520,12,0	0/1:19,1:19:56.32:63,0,56	1/1:14,4:21:6.02:118,6,0	1/1:41,4:49:6.02:141,6,0	./.	1/1:12,2:15:3.01:70,3,0	0/1:24,9:36:22.45:410,0,22	1/1:13,1:17:2.96:70,3,0	0/1:26,0:25:22.15:268,0,22	1/1:17,2:19:18:249,18,0	1/1:12,0:11:11.96:181,12,0
chr10	33911041	.	G	GA	1132.01	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=9.101;DP=541;FS=4.689;HRun=9;HaplotypeScore=57.9612;InbreedingCoeff=0.8354;MQ=69.02;MQ0=0;MQRankSum=-1.152;QD=20.21;ReadPosRankSum=0.170;VQSLOD=4.1482;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:41.99:0,42,365	0/0:10,0:10:26.99:0,27,234	0/0:20,0:19:53.95:0,54,459	0/1:8,0:8:21.12:21,0,109	0/0:22,0:22:56.97:0,57,495	0/0:27,1:28:47.80:0,48,644	0/0:10,0:10:26.99:0,27,234	0/0:28,0:28:62.10:0,62,543	0/0:20,1:21:26.81:0,27,461	0/0:33,0:33:80.94:0,81,700	0/0:25,0:25:56.95:0,57,495	1/1:3,16:19:45.12:497,45,0	0/0:18,0:18:50.99:0,51,442	0/0:16,0:16:41.97:0,42,364	0/0:19,0:19:47.98:0,48,417	0/0:20,0:20:44.97:0,45,391	0/0:31,0:31:83.95:0,84,724	0/0:14,0:14:38.97:0,39,334	0/0:14,0:14:35.98:0,36,313	0/0:15,0:16:38.03:0,38,318	0/0:16,0:16:44.99:0,45,391	0/0:18,0:18:20.49:0,20,340	1/1:2,15:17:39.11:431,39,0	1/1:0,12:12:30.08:331,30,0	0/0:22,0:21:62.95:0,63,542	0/0:21,0:21:62.99:0,63,547	0/0:28,0:28:80.98:0,81,703	0/0:18,0:18:47.98:0,48,417
chr10	33911926	.	AG	A	1387.48	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=10.766;DP=587;FS=5.731;HRun=3;HaplotypeScore=66.0460;InbreedingCoeff=0.9518;MQ=90.66;MQ0=0;MQRankSum=-3.747;QD=27.75;ReadPosRankSum=0.785;VQSLOD=2.6503;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,99,1407	0/0:5,0:5:12.04:0,12,173	0/0:25,0:25:72.21:0,72,975	0/0:23,0:23:63.18:0,63,840	0/0:23,0:23:66.22:0,66,950	0/0:26,0:26:78.25:0,78,1104	0/0:21,0:21:63.20:0,63,878	0/0:31,0:31:87.28:0,87,1225	0/0:26,0:26:75.24:0,75,1059	0/0:23,0:23:66.20:0,66,917	0/0:15,0:15:45.14:0,45,626	1/1:2,20:22:57.09:671,57,0	0/0:22,0:22:63.16:0,63,860	0/0:16,0:16:45.15:0,45,647	0/0:18,0:18:51.17:0,51,734	0/0:32,0:32:96.31:0,96,1364	0/0:27,0:27:78.26:0,78,1123	0/0:15,0:15:39.10:0,39,539	0/0:23,0:23:60.16:0,60,838	0/0:15,0:15:45.15:0,45,647	0/0:28,0:28:84.24:0,84,1186	0/0:12,0:12:33.11:0,33,469	1/1:2,18:20:54.04:617,54,0	1/1:0,8:8:20.91:241,21,0	0/0:26,0:26:75.23:0,75,1042	0/0:21,0:21:63.20:0,63,889	0/0:27,0:27:78.23:0,78,1085	0/0:2,0:2:6.02:0,6,86
chr10	33911984	.	AAGC	A	2160.72	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=11.062;DP=646;FS=9.093;HRun=0;HaplotypeScore=100.6207;InbreedingCoeff=0.9962;MQ=86.40;MQ0=0;MQRankSum=-8.856;QD=40.01;ReadPosRankSum=1.787;VQSLOD=4.9592;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,114,2661	0/0:7,0:7:18.06:0,18,425	0/0:22,0:22:66.23:0,66,1472	0/0:31,0:31:90.15:0,90,2036	0/0:24,0:24:72.25:0,72,1702	0/0:23,0:23:69.24:0,69,1594	0/0:29,0:29:84.29:0,84,1964	0/0:30,0:30:90.31:0,90,2058	0/0:28,0:28:84.29:0,84,1976	0/0:25,0:25:75.26:0,75,1732	0/0:13,0:13:39.13:0,39,916	1/1:2,22:24:60.21:1057,60,0	0/0:27,0:27:81.28:0,81,1873	0/0:24,0:24:72.25:0,72,1681	0/0:19,0:19:57.17:0,57,1289	0/0:25,0:25:72.25:0,72,1692	0/0:27,0:27:81.28:0,81,1916	0/0:15,0:15:39.13:0,39,909	0/0:20,0:20:57.20:0,57,1249	0/0:24,0:24:66.23:0,66,1559	0/0:34,0:34:99:0,102,2378	0/0:25,0:25:75.26:0,75,1757	1/1:3,16:19:45.07:718,45,0	1/1:0,11:11:30.10:529,30,0	0/0:21,0:21:60.21:0,60,1419	0/0:30,0:30:84.29:0,84,1975	0/0:23,0:23:66.20:0,66,1471	0/0:8,0:8:24.08:0,24,556
chr10	33912067	.	TGAGTTGCAGAAC	T	2037.77	PASS	AB=0.947;AC=7;AF=0.125;AN=56;BaseQRankSum=7.874;DP=635;FS=0.000;HRun=0;HaplotypeScore=214.8855;InbreedingCoeff=0.7729;MQ=81.73;MQ0=0;MQRankSum=-5.998;QD=43.36;ReadPosRankSum=1.338;VQSLOD=2.6738;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,117,6715	0/0:15,0:15:42.14:0,42,2353	0/1:17,0:18:23.31:23,0,1140	0/0:18,0:18:44.90:0,45,1283	0/0:30,0:30:90.27:0,90,4849	0/0:28,0:28:84.26:0,84,4536	0/0:28,0:28:84.29:0,84,5099	0/0:28,0:28:78.27:0,78,4198	0/0:22,0:22:66.19:0,66,3342	0/0:26,0:26:78.25:0,78,3999	0/0:20,0:20:57.19:0,57,3071	1/1:4,9:13:27.09:1015,27,0	0/0:30,0:30:87.27:0,87,4637	0/0:18,0:18:51.15:0,51,2577	0/0:28,0:28:84.29:0,84,4698	0/0:29,0:29:84.27:0,84,4905	0/0:25,0:25:72.23:0,72,4109	0/0:13,0:13:36.12:0,36,2017	0/0:26,0:26:75.25:0,75,3766	0/0:26,0:26:78.27:0,78,4558	0/0:22,0:22:63.22:0,63,3570	0/0:29,0:29:87.28:0,87,4691	1/1:3,10:13:30.10:1026,30,0	1/1:0,3:3:3.01:113,3,0	0/0:28,0:27:81.26:0,81,4546	0/0:16,0:16:48.14:0,48,2546	0/0:33,0:33:99:0,99,5665	0/0:11,0:11:33.11:0,33,2034
chr10	33912373	.	C	CT	2006.32	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=10.893;DP=677;FS=9.049;HRun=1;HaplotypeScore=83.7134;InbreedingCoeff=0.9993;MQ=78.42;MQ0=0;MQRankSum=-5.126;QD=35.83;ReadPosRankSum=1.691;VQSLOD=3.5722;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,160,2220	0/0:10,0:10:30.07:0,30,400	0/0:18,0:18:48.15:0,48,653	0/0:20,0:20:54.15:0,54,725	0/0:27,0:27:69.23:0,69,963	0/0:16,0:16:48.11:0,48,615	0/0:31,0:31:90.29:0,90,1240	0/0:31,0:31:93.30:0,93,1286	0/0:33,0:33:96.29:0,96,1306	0/0:23,0:23:66.22:0,66,922	0/0:20,0:20:60.20:0,60,839	1/1:2,23:25:69.24:1100,69,0	0/0:20,0:20:57.19:0,57,797	0/0:19,0:19:57.19:0,57,795	0/0:28,0:28:75.25:0,75,1049	0/0:30,0:30:87.29:0,87,1213	0/0:39,0:39:99:0,111,1552	0/0:22,0:22:63.21:0,63,881	0/0:27,0:27:75.23:0,75,1013	0/0:19,0:19:57.19:0,57,796	0/0:31,0:31:90.27:0,90,1223	0/0:25,0:25:69.23:0,69,965	1/1:2,12:14:27.09:429,27,0	1/1:0,17:17:38.33:620,38,0	0/0:14,0:14:39.13:0,39,546	0/0:21,0:21:63.20:0,63,864	0/0:31,0:30:90.29:0,90,1241	0/0:13,0:13:33.11:0,33,462
chr10	33912472	.	ACTTAGTCTTGGACCTAAGACTTTGGT	A	25097.95	PASS	AB=1.000;AC=47;AF=0.870;AN=54;BaseQRankSum=3.693;DP=563;FS=2.974;HRun=0;HaplotypeScore=384.7474;InbreedingCoeff=0.4915;MQ=71.06;MQ0=0;MQRankSum=-2.705;QD=49.50;ReadPosRankSum=4.634;VQSLOD=2.5384;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:27,6:33:16.30:914,16,0	1/1:3,8:11:21.07:1406,21,0	0/0:19,0:19:12.04:0,12,461	0/1:15,0:15:26.87:27,0,254	1/1:9,10:19:18.06:1043,18,0	1/1:12,9:21:15.05:1003,15,0	1/1:26,0:26:6.01:75,6,0	1/1:25,0:25:15.05:302,15,0	1/1:11,13:24:30.10:2016,30,0	1/1:16,8:24:24.08:1304,24,0	1/1:9,7:16:15.05:832,15,0	1/1:13,10:23:21.07:1407,21,0	1/1:9,5:14:12.04:806,12,0	1/1:11,9:20:15.05:1005,15,0	1/1:13,11:24:24.08:1609,24,0	1/1:14,7:21:15.05:1008,15,0	0/0:16,0:16:1.25:0,1,3	1/1:13,0:13:2.97:20,3,0	1/1:26,4:30:12.03:630,12,0	1/1:14,7:21:18.06:1198,18,0	0/0:15,0:15:1.25:0,1,3	1/1:18,9:27:27.09:1546,27,0	1/1:13,10:23:24.08:1611,24,0	1/1:8,2:10:3.01:202,3,0	1/1:10,10:20:21.07:1411,21,0	1/1:12,8:20:21.07:1303,21,0	1/1:13,14:27:36.12:2420,36,0	./.
chr10	33912771	.	GT	G	1979.17	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=10.105;DP=667;FS=0.000;HRun=2;HaplotypeScore=114.7150;InbreedingCoeff=0.9943;MQ=92.57;MQ0=0;MQRankSum=-0.770;QD=32.45;ReadPosRankSum=2.267;VQSLOD=3.3047;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,126,1883	0/0:12,0:12:36.04:0,36,489	0/0:28,0:28:84.26:0,84,1198	0/0:31,0:31:78.16:0,78,1137	0/0:27,0:27:78.15:0,78,1076	0/0:26,0:26:78.26:0,78,1167	0/0:28,0:28:84.23:0,84,1179	0/0:19,0:19:57.18:0,57,819	0/0:17,0:17:48.16:0,48,718	0/0:26,0:26:78.24:0,78,1121	0/0:20,0:20:60.19:0,60,879	1/1:0,20:20:54.18:698,54,0	0/0:21,0:21:63.20:0,63,924	0/0:26,0:26:78.26:0,78,1149	0/0:23,0:23:66.19:0,66,932	0/0:28,0:28:84.28:0,84,1259	0/0:36,0:36:99:0,105,1532	0/0:18,0:18:51.10:0,51,716	0/0:27,0:27:78.25:0,78,1146	0/0:13,0:13:36.08:0,36,513	0/0:39,0:39:99:0,117,1733	0/0:29,0:29:81.23:0,81,1177	1/1:1,24:25:69.21:879,69,0	1/1:0,16:16:42.14:545,42,0	0/0:22,0:22:60.20:0,60,898	0/0:20,0:20:57.15:0,57,829	0/0:20,0:20:54.17:0,54,790	0/0:6,0:6:15.05:0,15,225
chr10	33913077	.	G	GTA	13433.57	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=-7.877;DP=631;FS=3.786;HRun=0;HaplotypeScore=141.8390;InbreedingCoeff=0.9856;MQ=79.32;MQ0=0;MQRankSum=-4.966;QD=37.63;ReadPosRankSum=-1.170;VQSLOD=6.2461;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:87.27:0,87,1105	1/1:2,9:11:28.34:458,28,0	0/0:23,0:23:42.13:0,42,524	0/0:23,0:23:26.90:0,27,317	0/0:20,0:20:54.17:0,54,693	0/0:27,0:27:66.21:0,66,849	0/0:14,0:14:33.11:0,33,425	1/1:8,32:41:60.65:1493,61,0	0/0:18,0:18:45.13:0,45,564	1/1:3,24:28:67.05:1240,67,0	1/1:7,18:25:48.16:809,48,0	0/0:23,0:23:60.19:0,60,772	1/1:6,17:23:57.19:958,57,0	1/1:6,12:18:45.11:679,45,0	0/0:22,0:22:63.20:0,63,810	1/1:5,15:20:54.18:903,54,0	0/0:30,0:30:87.27:0,87,1105	1/1:3,12:15:33.11:556,33,0	1/1:8,13:21:15.23:738,15,0	1/1:11,13:24:9.55:703,10,0	1/1:3,17:20:51.17:859,51,0	1/1:7,8:15:24.08:405,24,0	0/0:19,0:19:42.14:0,42,540	0/0:17,0:17:36.12:0,36,463	1/1:5,21:26:27.67:1024,28,0	1/1:10,17:27:72.19:1167,72,0	1/1:17,22:38:78.23:1238,78,0	1/1:0,4:4:12.04:202,12,0
chr10	33913145	.	TGCAGAACACAGTAGA	T	25869.83	PASS	AB=0.825;AC=30;AF=0.556;AN=54;BaseQRankSum=9.167;DP=602;FS=3.466;HRun=0;HaplotypeScore=411.2807;InbreedingCoeff=0.8474;MQ=77.96;MQ0=0;MQRankSum=-16.824;QD=81.35;ReadPosRankSum=2.045;VQSLOD=3.9841;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:20,0:20:99:736,0,116	1/1:2,13:15:45.09:1819,45,0	0/0:18,0:18:50.98:0,51,1982	0/0:29,0:28:68.41:0,68,3566	0/0:19,0:19:57.18:0,57,3641	0/0:28,0:28:81.20:0,81,5219	0/0:25,0:25:75.22:0,75,4512	1/1:17,4:21:59.68:784,60,0	0/0:25,0:25:75.22:0,75,5022	1/1:11,10:21:62.66:1623,63,0	1/1:10,14:24:62.92:2055,63,0	0/0:29,0:29:87.20:0,87,5009	1/1:7,21:28:84.08:3035,84,0	1/1:11,10:21:53.83:1527,54,0	0/0:29,0:29:84.29:0,84,5727	0/1:6,7:13:99:1021,0,182	0/0:31,0:30:90.13:0,90,4392	1/1:4,1:5:14.95:228,15,0	1/1:9,4:13:35.53:713,36,0	1/1:4,16:20:59.98:2197,60,0	1/1:13,1:14:23.48:337,23,0	1/1:4,20:24:71.99:2799,72,0	0/0:31,0:31:75.21:0,75,4597	0/0:20,0:20:53.51:0,54,3553	1/1:7,18:25:71.92:2460,72,0	1/1:12,13:25:74.45:2100,74,0	1/1:13,16:29:83.84:2436,84,0	./.
chr10	33913147	.	CAGAACACAGTAGAGA	C	20500.43	PASS	AB=1.000;AC=31;AF=0.574;AN=54;BaseQRankSum=17.063;DP=594;FS=10.424;HRun=0;HaplotypeScore=426.4847;InbreedingCoeff=0.8591;MQ=77.71;MQ0=0;MQRankSum=-16.015;QD=66.13;ReadPosRankSum=4.582;VQSLOD=3.2797;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,10:19:23.11:915,23,0	1/1:15,0:15:39.13:1527,39,0	0/0:16,0:17:29.68:0,30,1667	0/0:28,0:27:54.15:0,54,3150	0/0:19,0:19:54.17:0,54,3228	0/0:27,0:27:75.26:0,75,4577	0/0:26,0:26:69.24:0,69,4115	1/1:21,0:21:9.03:347,9,0	0/0:25,0:25:72.22:0,72,4465	1/1:20,0:20:30.10:1157,30,0	1/1:23,0:23:42.14:1641,42,0	0/0:29,0:29:78.24:0,78,4334	1/1:28,0:28:66.21:2506,66,0	1/1:19,0:19:30.10:1173,30,0	0/0:31,0:31:90.31:0,90,5464	0/1:12,0:12:99:800,0,173	0/0:30,0:29:60.21:0,60,3736	1/1:5,0:5:3.01:116,3,0	1/1:12,0:12:12.04:461,12,0	1/1:20,0:20:48.16:1815,48,0	1/1:14,0:14:2.39:158,2,0	1/1:24,0:24:60.21:2359,60,0	0/0:32,0:32:69.24:0,69,4224	0/0:20,0:20:50.49:0,50,3130	1/1:25,0:25:51.18:1998,51,0	1/1:24,1:25:42.14:1640,42,0	1/1:28,0:28:48.16:1885,48,0	./.
chr10	33913259	.	CAAA	C	20129.06	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-4.569;DP=651;FS=13.123;HRun=11;HaplotypeScore=146.8953;InbreedingCoeff=0.9870;MQ=64.66;MQ0=0;MQRankSum=-3.191;QD=32.21;ReadPosRankSum=5.044;VQSLOD=2.5674;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,31:32:66.15:867,66,0	1/1:1,14:15:42.13:552,42,0	0/0:17,0:18:36.10:0,36,636	0/0:7,0:8:14.83:0,15,180	1/1:3,24:27:60.16:788,60,0	1/1:2,25:27:66.20:867,66,0	1/1:3,22:25:60.18:788,60,0	1/1:5,19:24:54.14:708,54,0	1/1:2,22:24:60.18:788,60,0	1/1:3,21:24:72.23:946,72,0	1/1:3,13:16:39.11:512,39,0	1/1:3,25:28:69.21:907,69,0	1/1:4,25:29:69.19:906,69,0	1/1:3,19:22:57.17:749,57,0	1/1:3,25:28:63.19:828,63,0	1/1:5,23:28:69.17:876,69,0	1/1:2,24:26:59.22:787,59,0	1/1:0,6:6:18.06:237,18,0	1/1:5,18:23:54.14:689,54,0	1/1:3,31:34:93.27:1222,93,0	1/1:6,19:25:51.12:670,51,0	1/1:4,24:28:66.17:867,66,0	1/1:1,18:19:44.93:591,45,0	1/1:2,15:18:45.08:570,45,0	1/1:1,29:30:78.25:1025,78,0	1/1:1,23:24:66.19:853,66,0	1/1:3,29:32:84.26:1104,84,0	1/1:2,9:11:33.11:432,33,0
chr10	33913375	.	TA	T	1687.71	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.769;DP=746;FS=2.664;HRun=1;HaplotypeScore=131.0723;InbreedingCoeff=0.9991;MQ=82.14;MQ0=0;MQRankSum=-4.847;QD=30.69;ReadPosRankSum=1.041;VQSLOD=3.4879;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,105,1635	0/0:9,0:9:27.09:0,27,432	0/0:24,0:24:64.88:0,65,1092	0/0:28,0:28:81.27:0,81,1263	0/0:22,0:22:60.15:0,60,959	0/0:21,0:21:63.21:0,63,1007	0/0:27,0:27:81.28:0,81,1287	0/0:39,0:39:99:0,114,1748	0/0:27,0:27:78.27:0,78,1242	0/0:33,0:33:99:0,99,1582	0/0:28,0:28:84.27:0,84,1317	1/1:4,19:22:63.17:826,63,0	0/0:28,0:28:84.29:0,84,1338	0/0:33,0:33:96.31:0,96,1507	0/0:34,0:34:99:0,102,1608	0/0:31,0:31:93.31:0,93,1455	0/0:16,0:16:48.16:0,48,767	0/0:15,0:15:45.15:0,45,719	0/0:18,0:18:51.16:0,51,792	0/0:45,0:45:99:0,135,2131	0/0:37,0:37:99:0,111,1772	0/0:32,0:32:96.33:0,96,1531	1/1:0,16:16:39.13:544,39,0	1/1:0,16:16:33.11:461,33,0	0/0:25,0:25:75.24:0,75,1177	0/0:33,0:33:96.33:0,96,1535	0/0:39,0:39:99:0,111,1748	0/0:9,0:9:27.09:0,27,426
chr10	33913423	.	G	GGTGTCA	5233.48	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.903;DP=752;FS=17.762;HRun=0;HaplotypeScore=187.3468;InbreedingCoeff=0.9967;MQ=67.02;MQ0=0;MQRankSum=-10.460;QD=74.76;ReadPosRankSum=0.165;VQSLOD=4.2663;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,147,3389	0/0:13,0:13:39.13:0,39,959	0/0:25,0:25:74.06:0,74,1616	0/0:15,0:15:45.13:0,45,866	0/0:21,0:21:63.22:0,63,1542	0/0:13,0:13:39.13:0,39,926	0/0:24,0:24:69.22:0,69,1650	0/0:28,0:28:78.25:0,78,1778	0/0:26,0:26:72.25:0,72,1773	0/0:30,0:30:87.30:0,87,2139	0/0:27,0:27:81.28:0,81,1990	1/1:1,19:19:54.19:1971,54,0	0/0:31,0:31:90.27:0,90,2148	0/0:36,0:36:99:0,108,2604	0/0:28,0:28:84.26:0,84,2017	0/0:31,0:31:90.31:0,90,2190	0/0:20,0:20:60.19:0,60,1395	0/0:10,0:10:30.10:0,30,739	0/0:29,0:29:84.24:0,84,1849	0/0:29,0:29:87.30:0,87,2135	0/0:46,0:46:99:0,138,3394	0/0:35,0:35:99:0,105,2515	1/1:7,26:33:72.25:2616,72,0	1/1:9,8:17:18.06:646,18,0	0/0:27,0:27:81.28:0,81,1969	0/0:34,0:34:93.32:0,93,2287	0/0:44,0:44:99:0,129,3049	0/0:10,0:10:30.10:0,30,711
chr10	33914117	.	CCTAA	C	3602.89	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=11.849;DP=678;FS=6.383;HRun=0;HaplotypeScore=112.5358;InbreedingCoeff=0.9890;MQ=78.15;MQ0=0;MQRankSum=-1.871;QD=52.98;ReadPosRankSum=3.684;VQSLOD=5.0217;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,102,2786	0/0:12,0:12:36.12:0,36,986	0/0:28,0:27:69.23:0,69,1756	0/0:24,0:24:63.18:0,63,1456	0/0:30,0:30:90.29:0,90,2368	0/0:25,0:25:75.26:0,75,1956	0/0:27,0:27:75.26:0,75,2020	0/0:42,0:42:99:0,120,3118	0/0:30,0:30:90.31:0,90,2416	0/0:21,0:21:60.21:0,60,1609	0/0:22,0:22:60.21:0,60,1643	1/1:1,22:23:57.20:1105,57,0	0/0:23,0:23:66.23:0,66,1798	0/0:21,0:21:60.21:0,60,1620	0/0:27,0:27:81.26:0,81,2096	0/0:31,0:31:93.32:0,93,2542	0/0:15,0:15:45.15:0,45,1233	0/0:17,0:17:45.15:0,45,1201	0/0:19,0:19:51.13:0,51,1191	0/0:29,0:29:87.29:0,87,2261	0/0:25,0:25:72.23:0,72,1867	0/0:19,0:19:57.18:0,57,1495	1/1:0,33:33:96.33:1859,96,0	1/1:1,11:12:33.11:639,33,0	0/0:23,0:23:69.17:0,69,1812	0/0:22,0:22:66.22:0,66,1703	0/0:38,0:38:99:0,111,2728	0/0:4,0:4:12.04:0,12,266
chr10	33914285	.	GAGAT	G	4445.83	PASS	AB=0.885;AC=34;AF=0.654;AN=52;BaseQRankSum=3.056;DP=514;FS=4.918;HRun=0;HaplotypeScore=95.5306;InbreedingCoeff=0.4531;MQ=60.99;MQ0=7;MQRankSum=-1.892;QD=11.17;ReadPosRankSum=1.318;VQSLOD=3.4381;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:20:2.96:19,3,0	0/0:10,0:17:18.05:0,18,268	./.	./.	1/1:15,4:19:18.04:235,18,0	1/1:25,4:28:30.07:382,30,0	1/1:8,6:14:3.01:46,3,0	0/1:30,0:29:0:0,0,0	0/1:13,8:20:39.71:382,0,40	0/0:18,0:25:24.07:0,24,394	0/0:11,0:20:17.84:0,18,241	0/1:20,0:20:48.40:164,0,48	1/1:5,9:14:24.08:366,24,0	0/0:17,0:17:15.05:0,15,328	1/1:9,0:22:29.53:260,30,0	0/1:27,1:28:9.68:10,0,686	1/1:13,0:14:6:54,6,0	1/1:4,10:14:24.08:366,24,0	0/0:13,0:12:12.03:0,12,221	1/1:11,11:22:27.05:386,27,0	1/1:11,5:15:3.01:46,3,0	0/1:16,1:17:9.66:10,0,730	1/1:20,0:20:24.06:255,24,0	1/1:13,0:13:15.04:156,15,0	1/1:7,9:18:27.08:378,27,0	0/1:10,10:21:19.31:383,0,19	1/1:12,14:26:36.12:549,36,0	0/0:8,0:12:9.03:0,9,157
chr10	33914329	.	TAGATAGATAGAA	T	929.49	PASS	AB=1.000;AC=6;AF=0.107;AN=56;BaseQRankSum=3.973;DP=535;FS=4.627;HRun=0;HaplotypeScore=195.3978;InbreedingCoeff=0.1155;MQ=61.27;MQ0=11;MQRankSum=-2.977;QD=10.44;ReadPosRankSum=-0.738;VQSLOD=2.3559;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:0,21:21:3.01:103,3,0	0/0:16,0:16:33.99:0,34,1050	0/0:15,0:9:14.22:0,14,194	0/0:13,0:9:6.84:0,7,218	0/0:19,0:19:52.58:0,53,733	0/0:22,0:21:60.12:0,60,1216	0/0:11,0:11:18.03:0,18,235	0/0:33,0:31:47.14:0,47,748	0/0:20,0:19:54.12:0,54,1149	0/0:29,0:28:78.20:0,78,2053	0/0:23,0:22:57.07:0,57,1158	0/1:15,0:15:13.87:14,0,710	0/0:18,0:18:51.12:0,51,1094	0/0:15,0:15:39.08:0,39,1174	0/1:21,0:21:99:748,0,153	0/0:28,0:28:72.19:0,72,2508	0/0:12,0:12:29.45:0,29,197	0/0:17,0:16:42.10:0,42,986	0/0:11,0:11:29.74:0,30,748	0/0:23,0:23:66.13:0,66,1411	0/0:10,0:9:15.03:0,15,321	0/0:18,0:18:54.15:0,54,2401	0/1:23,0:22:99:162,0,514	0/1:9,0:9:21.90:22,0,456	0/0:29,0:29:2.62:0,3,1161	0/0:24,0:23:66.15:0,66,1382	0/0:29,0:29:81.17:0,81,1615	0/0:11,0:11:30.05:0,30,712
chr10	33914337	.	TAGAA	T	2266.96	PASS	AB=0.976;AC=19;AF=0.339;AN=56;BaseQRankSum=12.094;DP=533;FS=1.700;HRun=0;HaplotypeScore=110.4739;InbreedingCoeff=-0.0289;MQ=66.26;MQ0=9;MQRankSum=-0.514;QD=7.31;ReadPosRankSum=3.026;VQSLOD=2.3435;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:21:3:29,3,0	0/0:13,0:13:29.91:0,30,394	0/0:19,0:13:19.41:0,19,323	0/0:17,0:13:18.81:0,19,355	0/1:16,0:16:31.38:31,0,238	0/1:24,0:23:62.78:63,0,241	0/1:10,0:10:3.83:4,0,94	0/0:32,0:31:92.93:0,93,836	0/1:21,0:20:99:115,0,267	0/0:30,0:29:81.07:0,81,1004	0/0:21,0:20:50.99:0,51,592	0/1:7,6:13:8.43:424,0,8	0/1:19,0:19:99:107,0,220	0/0:15,0:15:45.08:0,45,677	0/1:22,0:22:25.16:25,0,187	0/0:22,0:22:45.28:0,45,1056	0/0:13,0:13:24.53:0,25,224	0/1:17,0:16:99:113,0,115	0/0:14,0:14:38.60:0,39,435	0/1:25,0:25:82.70:83,0,328	0/1:9,0:8:3.83:4,0,93	0/0:18,0:18:36.28:0,36,1011	1/1:12,7:19:54.04:676,54,0	1/1:6,5:11:33.03:456,33,0	0/1:30,0:30:59.91:60,0,422	0/1:23,0:22:93.72:94,0,294	0/1:30,0:30:99:156,0,342	0/0:9,0:9:24.03:0,24,322
chr10	33914376	.	T	TA	2582.77	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=-10.903;DP=553;FS=0.444;HRun=8;HaplotypeScore=66.3244;InbreedingCoeff=0.8800;MQ=75.24;MQ0=4;MQRankSum=-1.379;QD=23.91;ReadPosRankSum=0.565;VQSLOD=4.2442;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:21:0,21,192	0/0:12,0:12:27.01:0,27,247	0/1:13,0:13:18.83:19,0,94	0/0:18,0:17:30.02:0,30,274	1/1:2,26:28:69.21:796,69,0	1/1:3,18:20:51.15:589,51,0	1/1:1,7:8:21.06:242,21,0	0/0:30,0:30:75.02:0,75,686	1/1:2,15:16:45.13:519,45,0	0/0:24,0:24:69.04:0,69,632	0/0:27,0:26:72.03:0,72,659	0/0:2,0:11:16.30:0,16,48	0/0:15,0:15:42.02:0,42,384	0/0:18,0:18:54.03:0,54,494	0/0:20,0:20:57.01:0,57,517	0/0:19,0:19:51.02:0,51,467	1/1:3,18:21:29.84:596,30,0	0/0:18,0:17:42.02:0,42,384	0/0:18,0:18:45.01:0,45,408	0/0:27,0:27:75.04:0,75,686	0/0:11,0:10:30.02:0,30,275	0/0:16,0:16:42.02:0,42,384	0/0:2,0:31:59.08:0,59,174	0/0:0,0:13:26.48:0,26,78	0/0:34,0:34:87.04:0,87,796	0/0:21,0:21:60.01:0,60,543	0/0:36,0:35:93.05:0,93,850	0/0:5,0:5:15.01:0,15,137
chr10	33914483	.	A	AC	2463.35	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-8.509;DP=612;FS=0.000;HRun=1;HaplotypeScore=57.9978;InbreedingCoeff=0.9989;MQ=83.08;MQ0=0;MQRankSum=-1.729;QD=40.38;ReadPosRankSum=0.942;VQSLOD=4.0760;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:90.30:0,90,1257	0/0:8,0:8:24.08:0,24,336	0/0:18,0:18:54.12:0,54,707	0/0:19,0:19:51.16:0,51,689	0/0:28,0:28:84.28:0,84,1175	0/0:27,0:27:78.26:0,78,1091	0/0:19,0:19:54.18:0,54,755	0/0:30,0:30:87.28:0,87,1199	0/0:20,0:20:57.19:0,57,797	0/0:19,0:19:57.19:0,57,797	0/0:18,0:18:54.18:0,54,755	1/1:0,13:13:39.13:624,39,0	0/0:24,0:24:72.24:0,72,1007	0/0:12,0:12:33.11:0,33,462	0/0:16,0:16:48.16:0,48,671	0/0:24,0:24:72.24:0,72,1007	0/0:30,0:30:87.28:0,87,1199	0/0:10,0:10:30.10:0,30,420	0/0:19,0:18:54.18:0,54,753	0/0:39,0:39:99:0,117,1603	0/0:13,0:13:39.13:0,39,546	0/0:25,0:25:72.23:0,72,991	1/1:0,29:29:72.25:1150,72,0	1/1:1,18:18:54.10:832,54,0	0/0:31,0:31:93.31:0,93,1298	0/0:24,0:24:72.24:0,72,1007	0/0:29,0:29:87.29:0,87,1214	0/0:19,0:19:57.19:0,57,797
chr10	33916724	.	A	AG	1253.88	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-8.650;DP=604;FS=7.076;HRun=1;HaplotypeScore=54.7366;InbreedingCoeff=0.9970;MQ=92.88;MQ0=1;MQRankSum=-4.239;QD=40.45;ReadPosRankSum=1.351;VQSLOD=4.1167;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:78.24:0,78,996	0/0:10,0:10:30.10:0,30,388	0/0:23,0:22:66.20:0,66,842	0/0:29,0:29:78.24:0,78,985	0/0:26,0:26:78.24:0,78,998	0/0:24,0:24:72.22:0,72,920	0/0:26,0:26:75.23:0,75,960	0/0:30,0:30:84.27:0,84,1090	0/0:18,0:18:54.18:0,54,701	0/0:29,0:29:84.26:0,84,1067	0/0:15,0:15:45.13:0,45,569	0/0:16,0:16:48.16:0,48,623	0/0:24,0:24:69.21:0,69,877	0/0:19,0:19:54.18:0,54,699	1/1:0,31:31:90.30:1349,90,0	0/0:17,0:17:51.17:0,51,662	0/0:15,0:15:45.15:0,45,584	0/0:12,0:12:33.09:0,33,410	0/0:16,0:16:45.15:0,45,584	0/0:26,0:26:78.25:0,78,1013	0/0:27,0:26:75.24:0,75,974	0/0:22,0:22:66.21:0,66,856	0/0:14,0:14:36.12:0,36,464	0/0:19,0:19:57.17:0,57,724	0/0:24,0:24:72.22:0,72,921	0/0:29,0:29:87.28:0,87,1127	0/0:28,0:28:81.25:0,81,1036	0/0:8,0:8:24.08:0,24,312
chr10	33918224	.	G	GA	1746.99	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-8.370;DP=652;FS=1.740;HRun=7;HaplotypeScore=113.1447;InbreedingCoeff=0.9963;MQ=78.71;MQ0=1;MQRankSum=-1.674;QD=24.96;ReadPosRankSum=2.157;VQSLOD=3.2453;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:96.06:0,96,909	0/0:12,0:12:33:0,33,303	0/0:31,0:24:36.68:0,37,309	0/0:31,0:24:17.68:0,18,133	0/0:38,0:38:99:0,102,956	0/0:22,0:22:63.04:0,63,593	0/0:20,0:20:51.01:0,51,481	0/0:21,0:21:54.45:0,54,505	0/0:17,0:17:48.08:0,48,463	0/0:27,0:27:75.11:0,75,717	0/0:18,0:18:48.06:0,48,459	1/1:4,20:24:54.15:624,54,0	0/0:14,0:14:42.01:0,42,392	0/0:29,0:29:77.95:0,78,715	0/0:23,0:23:63.08:0,63,602	0/0:16,0:16:39.06:0,39,376	0/0:14,0:14:41.95:0,42,379	0/0:21,0:21:59.97:0,60,557	0/0:26,0:26:75.07:0,75,705	0/0:38,0:38:99:0,99,950	0/0:10,0:10:27.04:0,27,260	0/0:18,0:18:48.07:0,48,463	1/1:3,21:24:54.16:630,54,0	1/1:1,21:22:54.16:636,54,0	0/0:21,0:21:60.09:0,60,579	0/0:36,0:36:96.14:0,96,921	0/0:30,0:30:81.07:0,81,766	0/0:14,0:14:42.07:0,42,405
chr10	33919166	.	C	CAAAA	7595.27	PASS	AB=0.798;AC=50;AF=0.893;AN=56;BaseQRankSum=-0.092;DP=486;FS=4.011;HRun=15;HaplotypeScore=127.2895;InbreedingCoeff=0.4515;MQ=66.86;MQ0=0;MQRankSum=-2.351;QD=16.80;ReadPosRankSum=-6.856;VQSLOD=0.5600;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:10,0:30:20.36:20,0,125	1/1:4,3:10:20.98:342,21,0	0/1:15,0:12:21.18:21,0,100	0/0:14,0:10:2.39:0,2,22	1/1:3,0:10:21.76:214,22,0	1/1:5,0:15:14.88:170,15,0	1/1:8,0:24:12.40:140,12,0	1/1:25,0:26:32.73:445,33,0	1/1:12,0:22:15.05:261,15,0	1/1:12,0:19:25.87:354,26,0	1/1:10,2:14:7.22:387,7,0	1/1:13,0:16:34.30:386,34,0	1/1:11,0:15:21.07:357,21,0	1/1:14,0:14:33.11:505,33,0	0/0:2,0:20:51.61:0,52,385	1/1:5,0:5:9.03:166,9,0	1/1:7,0:20:11.87:135,12,0	1/1:8,4:13:12.58:250,13,0	1/1:16,0:16:27:395,27,0	1/1:10,5:19:42.08:581,42,0	1/1:13,0:21:8.19:64,8,0	1/1:9,0:16:26.31:375,26,0	1/1:16,0:18:31.37:324,31,0	1/1:25,0:28:30.23:488,30,0	1/1:7,0:16:20.28:279,20,0	1/1:9,5:16:30.88:443,31,0	1/1:9,7:18:18.06:299,18,0	1/1:9,3:13:10.85:197,11,0
chr10	33919215	.	C	CA	2110.27	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=7.557;DP=442;FS=5.792;HRun=1;HaplotypeScore=56.2422;InbreedingCoeff=0.9955;MQ=93.49;MQ0=0;MQRankSum=-1.728;QD=42.21;ReadPosRankSum=2.745;VQSLOD=4.0200;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:60.20:0,60,839	0/0:9,0:9:27.09:0,27,377	0/0:20,0:20:54.15:0,54,730	0/0:19,0:19:50.79:0,51,654	0/0:15,0:15:39.11:0,39,512	0/0:12,0:12:24.08:0,24,333	0/0:15,0:15:27.09:0,27,378	0/0:36,0:36:99:0,105,1467	0/0:12,0:12:21.07:0,21,294	0/0:14,0:14:36.09:0,36,457	0/0:12,0:12:30.08:0,30,380	1/1:0,12:12:36.12:575,36,0	0/0:12,0:12:33.11:0,33,461	0/0:13,0:13:39.12:0,39,525	0/0:17,0:17:51.17:0,51,711	0/0:15,0:15:45.15:0,45,627	0/0:19,0:19:39.10:0,39,527	0/0:11,0:11:27.09:0,27,378	0/0:12,0:12:33.08:0,33,436	0/0:16,0:16:42.11:0,42,546	0/0:16,0:16:33.11:0,33,462	0/0:15,0:15:42.14:0,42,585	1/1:1,14:15:36.12:575,36,0	1/1:0,23:23:69.24:1103,69,0	0/0:13,0:12:33.10:0,33,442	0/0:13,0:13:39.12:0,39,523	0/0:14,0:13:27.09:0,27,378	0/0:13,0:13:36.11:0,36,486
chr10	33919395	.	G	GCT	2682.35	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.577;DP=449;FS=5.383;HRun=0;HaplotypeScore=62.0220;InbreedingCoeff=0.9258;MQ=66.96;MQ0=0;MQRankSum=-0.601;QD=48.77;ReadPosRankSum=1.311;VQSLOD=4.7445;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,99,1434	0/0:8,0:8:20.97:0,21,242	0/0:20,0:17:46.54:0,47,574	0/0:13,0:13:35.23:0,35,480	0/0:10,0:10:30.08:0,30,421	0/0:10,0:10:30.10:0,30,442	0/0:29,0:29:84.18:0,84,1189	0/0:23,0:23:66.19:0,66,917	0/0:9,0:9:21.07:0,21,309	0/0:17,0:17:51.17:0,51,733	0/0:10,0:10:27.09:0,27,397	1/1:0,13:13:39.10:691,39,0	0/0:10,0:10:30.02:0,30,414	0/0:26,0:26:75.25:0,75,1097	0/0:17,0:17:48.16:0,48,706	0/0:10,0:10:30.10:0,30,439	0/0:25,0:25:72.23:0,72,1039	0/0:20,0:20:60.20:0,60,883	0/0:10,0:10:30.10:0,30,440	0/0:15,0:15:45.14:0,45,643	0/0:29,0:29:84.17:0,84,1172	0/0:10,0:10:27.09:0,27,397	1/1:0,9:9:24.08:448,24,0	1/1:1,32:33:90.31:1685,90,0	0/0:4,0:4:12.04:0,12,177	0/0:14,0:14:35.21:0,35,505	0/0:20,0:20:60.19:0,60,863	0/0:1,0:1:3.01:0,3,44
chr10	33919761	.	AT	A	826.35	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=5.759;DP=382;FS=0.653;HRun=8;HaplotypeScore=45.8746;InbreedingCoeff=0.9011;MQ=65.40;MQ0=0;MQRankSum=-2.511;QD=16.53;ReadPosRankSum=0.664;VQSLOD=3.2324;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,12:17:38.98:364,39,0	0/0:9,0:9:27.04:0,27,300	0/0:8,0:7:8.65:0,9,84	0/1:8,0:6:0.37:0,0,4	0/0:17,0:17:48.13:0,48,568	0/0:16,0:16:36.11:0,36,435	0/0:9,0:9:24.07:0,24,289	0/0:28,0:28:75.22:0,75,896	0/0:5,0:5:12.04:0,12,144	0/0:19,0:19:57.17:0,57,680	0/0:24,0:24:66.16:0,66,771	1/1:2,6:8:20.95:184,21,0	0/0:11,0:11:33.10:0,33,398	0/0:6,0:6:18.06:0,18,217	0/0:12,0:12:36.10:0,36,423	0/0:8,0:8:14.96:0,15,162	0/0:15,0:15:30.09:0,30,362	0/0:11,0:11:27.08:0,27,326	0/0:19,0:19:51.16:0,51,616	0/0:20,0:20:60.18:0,60,724	0/0:13,0:13:24.07:0,24,290	0/0:12,0:12:30.09:0,30,362	1/1:0,12:12:33.05:318,33,0	1/1:0,5:5:12.02:116,12,0	0/0:11,0:9:27.07:0,27,315	0/0:22,0:22:60.15:0,60,709	0/0:27,0:27:66.16:0,66,772	0/0:10,0:10:27.06:0,27,312
chr10	33919804	.	CA	C	2610.39	PASS	AB=0.735;AC=40;AF=0.714;AN=56;BaseQRankSum=3.396;DP=409;FS=1.258;HRun=14;HaplotypeScore=56.0217;InbreedingCoeff=0.3349;MQ=72.83;MQ0=1;MQRankSum=1.322;QD=7.61;ReadPosRankSum=3.900;VQSLOD=2.5165;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,1:19:28.63:94,29,0	0/1:2,2:5:16.87:36,0,17	0/0:17,0:13:0.22:0,0,62	0/1:7,1:8:5.22:5,0,24	0/1:23,1:27:4.67:5,0,253	0/0:17,1:19:11.54:0,12,266	0/0:8,0:9:14.18:0,14,161	1/1:8,16:27:17.74:246,18,0	0/1:5,2:7:19.05:32,0,19	1/1:12,4:18:25.90:140,26,0	1/1:7,17:27:48.53:320,49,0	1/1:11,0:11:5.06:14,5,0	1/1:5,9:14:20.79:144,21,0	1/1:2,5:7:5.95:41,6,0	0/1:5,9:16:5.99:93,0,6	1/1:1,11:13:24.89:156,25,0	0/0:10,1:14:1.68:0,2,198	0/1:4,5:10:13.96:54,0,14	1/1:6,13:21:42.50:269,43,0	1/1:6,10:17:25.69:170,26,0	1/1:1,6:8:13.94:88,14,0	1/1:3,8:11:20.79:144,21,0	1/1:9,0:9:0.28:3,0,0	0/0:7,0:7:0:0,0,0	1/1:3,4:9:15.92:94,16,0	1/1:8,10:21:35.82:223,36,0	1/1:9,14:25:30.61:196,31,0	1/1:0,9:12:32.89:203,33,0
chr10	33919816	.	A	AGGGG	901.44	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=3.520;DP=410;FS=9.847;HRun=0;HaplotypeScore=95.2725;InbreedingCoeff=0.8878;MQ=69.63;MQ0=1;MQRankSum=-4.350;QD=45.07;ReadPosRankSum=-1.727;VQSLOD=3.6214;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:30.36:0,30,557	0/0:6,0:6:18.06:0,18,297	0/0:15,0:11:17.98:0,18,323	0/0:5,0:5:11.29:0,11,209	0/0:28,0:28:71:0,71,1245	0/0:19,0:19:57.10:0,57,997	0/0:12,0:12:36.11:0,36,670	0/0:27,0:27:78.24:0,78,1189	0/0:10,0:10:27.04:0,27,393	0/0:16,0:16:19.46:0,19,609	0/0:25,0:25:66.20:0,66,941	1/1:5,4:9:27.09:577,27,0	0/0:14,0:14:30.10:0,30,459	0/0:8,0:8:9.03:0,9,140	0/0:17,0:17:33.11:0,33,516	0/0:17,0:16:36.11:0,36,502	0/0:16,0:16:42.13:0,42,763	0/0:11,0:11:23.65:0,24,315	0/0:21,0:21:63.16:0,63,895	0/0:20,0:20:45.14:0,45,669	0/0:9,0:9:18.06:0,18,236	0/0:14,0:14:36.07:0,36,536	1/1:6,2:8:21.05:398,21,0	1/1:2,1:3:2.99:57,3,0	0/0:11,0:11:30.07:0,30,394	0/0:16,0:16:45.15:0,45,633	0/0:21,0:21:45.10:0,45,633	0/0:12,0:12:36.12:0,36,478
chr10	33919818	.	A	AGGGGGG	1544.76	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-1.028;DP=389;FS=17.628;HRun=2;HaplotypeScore=98.6588;InbreedingCoeff=0.8508;MQ=69.31;MQ0=1;MQRankSum=-5.685;QD=73.56;ReadPosRankSum=-1.176;VQSLOD=0.9396;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:51.10:0,51,836	0/0:6,0:6:18.06:0,18,361	0/0:13,0:9:3.54:0,4,296	0/0:5,0:5:11.98:0,12,261	0/0:28,0:28:66.22:0,66,1390	0/0:19,0:19:48.16:0,48,1034	0/0:11,0:11:33.11:0,33,728	0/0:27,0:27:75.26:0,75,1443	0/0:8,0:8:24.05:0,24,463	0/0:16,0:16:39.03:0,39,761	0/0:25,0:25:69.21:0,69,1213	1/1:7,4:11:33.11:996,33,0	0/0:12,0:12:30.10:0,30,573	0/0:8,0:8:12.04:0,12,214	0/0:16,0:16:36.09:0,36,638	0/0:16,0:16:36.12:0,36,677	0/0:16,0:16:45.14:0,45,928	0/0:8,0:8:18.06:0,18,347	0/0:21,0:21:63.13:0,63,1143	0/0:16,0:16:45.15:0,45,834	0/0:9,0:9:21.07:0,21,369	0/0:12,0:12:33.11:0,33,633	1/1:4,3:7:21.06:584,21,0	1/1:1,2:3:3.01:95,3,0	0/0:10,0:10:27.09:0,27,518	0/0:15,0:15:45.15:0,45,824	0/0:19,0:19:42.14:0,42,784	0/0:12,0:12:36.12:0,36,637
chr10	33919873	.	C	CA	840.88	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-0.971;DP=430;FS=6.461;HRun=6;HaplotypeScore=49.4421;InbreedingCoeff=0.9502;MQ=69.85;MQ0=0;MQRankSum=-2.847;QD=24.73;ReadPosRankSum=1.105;VQSLOD=3.4632;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:42.10:0,42,428	0/0:6,0:6:15.03:0,15,153	0/0:5,0:5:9.02:0,9,92	0/0:9,0:9:17.98:0,18,165	0/0:31,0:31:81.16:0,81,817	0/0:20,0:20:51.11:0,51,519	0/0:6,0:6:18.04:0,18,184	0/0:34,0:34:72.08:0,72,711	0/0:14,0:14:39.09:0,39,398	0/0:20,0:20:54.12:0,54,551	0/0:19,0:19:48.08:0,48,476	1/1:4,5:9:15.05:189,15,0	0/0:14,0:14:33.05:0,33,328	0/0:8,0:8:21.05:0,21,214	0/0:13,0:13:24.05:0,24,244	0/0:14,0:14:30.06:0,30,306	0/0:20,0:20:57.10:0,57,572	0/0:10,0:10:18.04:0,18,183	0/0:19,0:19:54.12:0,54,550	0/0:24,0:24:69.16:0,69,703	0/0:8,0:8:15.01:0,15,146	0/0:16,0:16:42.08:0,42,422	1/1:2,15:17:42.13:528,42,0	1/1:0,8:8:21.07:264,21,0	0/0:18,0:18:51.11:0,51,519	0/0:24,0:23:66.15:0,66,673	0/0:20,0:20:39.08:0,39,397	0/0:9,0:9:24.05:0,24,244
chr10	33920071	.	T	TTCC	3442.57	PASS	AB=0.829;AC=18;AF=0.321;AN=56;BaseQRankSum=2.691;DP=456;FS=2.327;HRun=0;HaplotypeScore=128.5258;InbreedingCoeff=0.6963;MQ=42.23;MQ0=23;MQRankSum=-6.195;QD=21.52;ReadPosRankSum=-0.317;VQSLOD=3.4270;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,10:16:25.33:472,25,0	0/0:4,0:4:3.30:0,3,65	0/0:16,0:2:6.01:0,6,68	0/0:13,0:5:14.81:0,15,140	1/1:2,14:17:29.96:570,30,0	1/1:11,10:18:43.34:692,43,0	1/1:5,12:17:32.95:573,33,0	0/0:25,0:17:11.52:0,12,242	0/1:15,5:19:9.55:281,0,10	0/0:22,0:21:44.98:0,45,494	0/0:11,0:11:29.84:0,30,321	1/1:3,0:2:3.01:39,3,0	0/0:23,0:21:47.92:0,48,580	0/0:23,0:22:42:0,42,540	1/1:6,18:27:26.80:537,27,0	0/0:18,0:17:35.71:0,36,418	0/1:15,3:17:12.28:219,0,12	0/0:8,0:7:14.61:0,15,159	0/0:14,0:11:15.03:0,15,175	0/0:14,0:14:21.25:0,21,263	0/0:18,0:14:24.75:0,25,297	0/0:13,0:12:29.70:0,30,338	1/1:12,0:11:1.89:55,2,0	1/1:2,0:1:1.55:4,2,0	0/0:22,0:19:47.87:0,48,469	0/0:33,0:29:68.90:0,69,688	0/0:8,0:8:17.99:0,18,192	0/0:9,0:9:15.01:0,15,159
chr10	33920086	.	CTCT	C	301.43	PASS	AB=0.964;AC=11;AF=0.196;AN=56;BaseQRankSum=3.335;DP=467;FS=1.478;HRun=0;HaplotypeScore=128.2422;InbreedingCoeff=0.1133;MQ=44.95;MQ0=19;MQRankSum=-3.437;QD=2.15;ReadPosRankSum=-4.836;VQSLOD=0.8613;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:21,0:16:13.56:14,0,250	0/1:4,0:4:4.91:5,0,155	0/0:27,0:3:9:0,9,137	0/0:21,0:6:17.75:0,18,290	0/1:18,1:19:53.49:53,0,415	0/1:21,1:20:19.10:19,0,588	0/1:22,0:20:71.51:72,0,473	0/0:23,0:16:38.74:0,39,618	0/1:14,2:15:71.63:72,0,299	0/0:24,0:23:69.21:0,69,1303	0/0:10,0:10:30.10:0,30,652	0/0:3,0:1:2.96:0,3,19	0/0:19,0:18:54.17:0,54,1208	0/0:19,0:18:48.15:0,48,1002	0/0:27,0:27:41.72:0,42,515	0/0:17,0:16:44.47:0,44,932	0/1:18,1:17:99:101,0,193	0/0:9,0:9:10.21:0,10,320	0/0:14,0:9:27.05:0,27,471	0/0:12,0:12:29.69:0,30,601	0/0:21,0:19:40.37:0,40,683	0/0:13,0:12:36.10:0,36,669	1/1:16,0:16:11.27:101,11,0	1/1:1,0:1:2.37:8,2,0	0/0:21,0:20:57.17:0,57,1176	0/0:27,0:26:78.25:0,78,1642	0/0:11,0:11:30.08:0,30,531	0/0:9,0:9:15.05:0,15,328
chr10	33920120	.	TCC	T	1287.28	PASS	AB=0.796;AC=9;AF=0.161;AN=56;BaseQRankSum=9.265;DP=565;FS=4.590;HRun=2;HaplotypeScore=101.1532;InbreedingCoeff=-0.0435;MQ=49.22;MQ0=28;MQRankSum=-7.601;QD=8.41;ReadPosRankSum=1.409;VQSLOD=0.7489;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:26:59.99:0,60,1022	0/0:3,0:3:9.03:0,9,181	0/0:33,0:4:6.02:0,6,116	0/0:40,0:10:2.17:0,2,140	0/1:15,6:20:99:144,0,442	0/1:13,12:24:99:421,0,401	0/1:13,3:14:90.22:90,0,386	0/0:29,0:20:45.05:0,45,815	0/1:22,6:26:99:169,0,816	0/0:26,0:21:60.68:0,61,1205	0/0:9,0:8:21.07:0,21,423	0/1:7,1:5:20.31:20,0,107	0/0:23,0:21:60.19:0,60,1148	0/0:25,0:25:60.20:0,60,1192	0/0:25,0:24:39.08:0,39,730	0/0:17,0:17:51.16:0,51,981	0/1:19,2:17:95.93:96,0,389	0/0:18,0:16:42.91:0,43,757	0/0:19,0:13:36.12:0,36,721	0/0:8,0:7:12.04:0,12,232	0/0:25,0:24:63.17:0,63,1202	0/0:16,0:15:42.14:0,42,838	0/1:13,15:27:99:471,0,230	1/1:6,0:2:2.74:12,3,0	0/0:17,0:16:48.11:0,48,932	0/0:28,0:25:66.22:0,66,1284	0/0:14,0:14:42.13:0,42,818	0/0:4,0:4:9.02:0,9,147
chr10	33920140	.	TCC	T	771.75	PASS	AB=0.971;AC=7;AF=0.125;AN=56;BaseQRankSum=8.532;DP=600;FS=1.586;HRun=4;HaplotypeScore=91.6511;InbreedingCoeff=0.6823;MQ=45.98;MQ0=31;MQRankSum=-6.333;QD=10.43;ReadPosRankSum=3.536;VQSLOD=0.2306;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:22:60.12:0,60,976	0/0:5,0:5:12.03:0,12,189	0/0:42,0:6:17.94:0,18,206	0/0:54,0:11:19.89:0,20,210	0/0:14,0:13:36.12:0,36,655	0/0:23,0:21:52.98:0,53,761	0/0:19,0:16:48.10:0,48,815	0/0:23,0:15:27.08:0,27,397	0/0:34,0:32:81.23:0,81,1326	0/0:21,0:17:48.63:0,49,827	0/0:12,0:12:30.09:0,30,532	1/1:9,0:7:0.22:89,0,0	0/0:25,0:24:68.89:0,69,1120	0/0:28,0:27:63.15:0,63,1024	0/0:20,0:19:30.05:0,30,495	0/0:18,0:17:45.13:0,45,746	0/0:31,1:27:69.04:0,69,1011	0/0:15,0:13:31.22:0,31,507	0/0:22,0:16:45.13:0,45,793	0/0:11,0:10:30.09:0,30,487	0/1:32,1:32:5.12:5,0,1246	0/0:16,0:14:36.11:0,36,629	1/1:19,5:25:65.50:767,65,0	1/1:7,0:3:2.84:32,3,0	0/0:16,0:15:45.11:0,45,742	0/0:22,0:20:51.17:0,51,925	0/0:16,0:15:45.15:0,45,843	0/0:6,0:5:14.99:0,15,211
chr10	33920142	.	C	CT	500.17	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.761;DP=605;FS=0.692;HRun=0;HaplotypeScore=89.6466;InbreedingCoeff=0.8950;MQ=46.07;MQ0=27;MQRankSum=-8.032;QD=12.20;ReadPosRankSum=2.121;VQSLOD=4.5065;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:23:60.12:0,60,778	0/0:4,0:4:12.03:0,12,145	0/0:42,0:7:17.93:0,18,173	0/0:54,0:11:20.47:0,20,211	0/0:13,0:13:36.12:0,36,503	0/0:25,0:23:45.23:0,45,605	0/0:19,0:16:48.14:0,48,652	0/0:23,0:16:26.87:0,27,330	0/0:36,0:33:60.19:0,60,1010	0/0:22,0:18:52.40:0,52,686	0/0:12,0:12:30.09:0,30,404	1/1:6,2:8:15.88:115,16,0	0/0:26,0:23:22.15:0,22,830	0/0:28,0:27:66.14:0,66,848	0/0:20,0:19:30.05:0,30,381	0/0:18,0:17:45.13:0,45,596	0/0:31,1:27:69.04:0,69,818	0/0:17,0:15:14.12:0,14,386	0/0:21,0:16:45.12:0,45,609	0/0:11,0:10:30.09:0,30,402	0/0:33,2:34:17.77:0,18,988	0/0:15,0:13:36.11:0,36,487	1/1:14,11:25:46.81:469,47,0	1/1:5,2:3:2.84:46,3,0	0/0:18,0:17:41.11:0,41,578	0/0:22,0:20:51.17:0,51,712	0/0:16,0:15:45.15:0,45,629	0/0:6,0:5:14.99:0,15,168
chr10	33920146	.	C	CTT	271.68	PASS	AB=0.774;AC=2;AF=0.036;AN=56;BaseQRankSum=6.455;DP=613;FS=2.040;HRun=1;HaplotypeScore=100.6569;InbreedingCoeff=-0.0315;MQ=46.09;MQ0=28;MQRankSum=-5.070;QD=7.55;ReadPosRankSum=1.360;VQSLOD=0.5084;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:24:66.11:0,66,980	0/0:4,0:4:12.04:0,12,193	0/0:42,0:6:15.05:0,15,225	0/0:56,0:12:23.64:0,24,273	0/0:13,0:13:35.97:0,36,520	0/0:23,0:21:43.87:0,44,590	0/0:20,0:17:51.07:0,51,749	0/0:24,0:15:26.57:0,27,376	0/0:36,0:32:75.16:0,75,1103	0/0:17,0:14:39.55:0,40,584	0/0:12,0:12:33.11:0,33,533	0/1:7,2:8:29.90:61,0,30	0/0:25,0:22:63.07:0,63,916	0/0:28,0:27:57.12:0,57,853	0/0:23,0:22:36.05:0,36,507	0/0:19,0:18:42.13:0,42,659	0/0:30,0:26:60.17:0,60,918	0/0:18,0:16:43.17:0,43,592	0/0:21,0:16:42.12:0,42,631	0/0:13,0:12:36.08:0,36,512	0/0:37,0:36:93.27:0,93,1398	0/0:15,0:13:36.10:0,36,534	0/1:17,10:27:99:299,0,169	0/0:7,0:3:2.90:0,3,16	0/0:17,0:16:45.15:0,45,721	0/0:23,0:21:54.18:0,54,850	0/0:17,0:16:48.14:0,48,756	0/0:6,0:5:15.01:0,15,211
chr10	33920149	.	C	CT	549.68	PASS	AB=0.638;AC=2;AF=0.036;AN=56;BaseQRankSum=6.750;DP=589;FS=10.203;HRun=2;HaplotypeScore=80.9501;InbreedingCoeff=0.3378;MQ=45.43;MQ0=28;MQRankSum=-5.016;QD=15.27;ReadPosRankSum=0.538;VQSLOD=2.3979;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:24:69.20:0,69,838	0/0:4,0:4:12.04:0,12,149	0/0:41,0:6:15.05:0,15,186	0/0:54,0:13:17.66:0,18,215	0/0:12,0:12:30.06:0,30,352	0/0:20,0:18:42.28:0,42,456	0/0:20,0:17:48.10:0,48,577	0/0:23,0:15:29.26:0,29,321	0/0:35,0:31:59.67:0,60,742	0/0:17,0:14:27.07:0,27,323	0/0:13,0:13:33.10:0,33,409	0/1:3,6:8:0.65:188,0,1	0/0:22,0:20:60.15:0,60,724	0/0:25,0:24:57.18:0,57,704	0/0:22,0:21:39.12:0,39,483	0/0:17,0:16:42.13:0,42,517	0/0:30,0:27:60.19:0,60,741	0/0:17,0:16:39.12:0,39,476	0/0:20,0:14:37.63:0,38,432	0/0:12,0:12:33.10:0,33,406	0/0:36,0:35:90.28:0,90,1108	0/0:13,0:12:27.08:0,27,335	0/1:14,13:27:99:450,0,113	0/0:7,0:3:1.82:0,2,5	0/0:17,0:16:45.14:0,45,557	0/0:22,0:20:51.16:0,51,632	0/0:17,0:16:48.15:0,48,595	0/0:5,0:4:12.04:0,12,149
chr10	33920236	.	CCTT	C	469.28	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=6.953;DP=627;FS=18.180;HRun=0;HaplotypeScore=97.8845;InbreedingCoeff=0.9242;MQ=68.18;MQ0=1;MQRankSum=-2.117;QD=14.66;ReadPosRankSum=-1.431;VQSLOD=1.3455;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:42:96.22:0,96,1817	0/0:10,0:10:27.06:0,27,510	0/0:32,0:22:8.49:0,8,554	0/0:30,0:22:47.15:0,47,683	0/0:19,0:19:57.14:0,57,1206	0/0:21,0:21:57.13:0,57,1135	0/0:19,0:19:57.18:0,57,1198	0/0:18,0:17:39.03:0,39,605	0/0:35,0:33:90.16:0,90,1668	0/0:20,0:20:51.17:0,51,1040	0/0:19,0:19:51.16:0,51,1014	1/1:4,5:9:24.05:336,24,0	0/0:28,0:27:57.16:0,57,1103	0/0:21,0:21:54.13:0,54,945	0/0:34,0:34:81.04:0,81,1576	0/0:29,0:29:75.21:0,75,1426	0/0:34,0:34:93.28:0,93,1878	0/0:14,0:14:21.30:0,21,609	0/0:20,0:20:53.65:0,54,1021	0/0:28,0:28:75.19:0,75,1365	0/0:36,0:36:84.14:0,84,1430	0/0:11,0:11:33.03:0,33,585	1/1:10,4:13:12.03:168,12,0	1/1:0,9:9:6.02:96,6,0	0/0:17,0:17:42.12:0,42,784	0/0:31,0:31:81.21:0,81,1562	0/0:15,0:15:42.13:0,42,880	0/0:10,0:10:29.59:0,30,576
chr10	33920563	.	GC	G	2729.14	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.760;DP=752;FS=1.519;HRun=1;HaplotypeScore=73.9338;InbreedingCoeff=0.9889;MQ=92.34;MQ0=0;MQRankSum=-1.490;QD=37.39;ReadPosRankSum=1.323;VQSLOD=4.1507;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,156,2440	0/0:4,0:4:12.04:0,12,192	0/0:34,0:34:99:0,99,1527	0/0:30,0:30:87.18:0,87,1320	0/0:39,0:39:99:0,114,1796	0/0:32,0:32:96.31:0,96,1512	0/0:19,0:19:57.19:0,57,911	0/0:27,0:27:81.24:0,81,1215	0/0:30,0:30:90.29:0,90,1410	0/0:29,0:29:87.28:0,87,1366	0/0:29,0:29:87.28:0,87,1368	1/1:0,22:22:63.21:881,63,0	0/0:30,0:30:90.31:0,90,1439	0/0:34,0:34:99:0,102,1631	0/0:27,0:27:81.28:0,81,1295	0/0:26,0:26:78.27:0,78,1247	0/0:23,0:23:66.22:0,66,1049	0/0:18,0:18:54.18:0,54,863	0/0:19,0:19:57.19:0,57,888	0/0:30,0:30:80.95:0,81,1256	0/0:32,0:32:96.33:0,96,1532	0/0:33,0:33:96.31:0,96,1502	1/1:0,21:21:60.20:838,60,0	1/1:2,28:30:84.25:1154,84,0	0/0:22,0:22:66.23:0,66,1055	0/0:26,0:26:78.27:0,78,1248	0/0:24,0:23:72.25:0,72,1150	0/0:10,0:10:30.10:0,30,480
chr10	33921198	.	GC	G	1232.64	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.709;DP=507;FS=7.887;HRun=2;HaplotypeScore=73.4506;InbreedingCoeff=0.9224;MQ=55.55;MQ0=7;MQRankSum=-7.068;QD=30.06;ReadPosRankSum=0.202;VQSLOD=2.5340;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,99,1451	0/0:8,0:8:24.08:0,24,359	0/0:6,0:4:12.04:0,12,168	0/0:7,0:4:3.01:0,3,43	0/0:32,0:32:93.32:0,93,1392	0/0:11,0:11:30.10:0,30,449	0/0:13,0:13:36.08:0,36,514	0/0:29,0:28:78.26:0,78,1144	0/0:9,0:8:20.90:0,21,315	0/0:19,0:19:54.18:0,54,793	0/0:30,0:30:90.30:0,90,1347	1/1:1,8:9:24.08:311,24,0	0/0:18,0:18:51.17:0,51,764	0/0:12,0:12:33.11:0,33,495	0/0:13,0:13:36.12:0,36,540	0/0:6,0:6:18.06:0,18,269	0/0:28,0:28:75.24:0,75,1103	0/0:23,0:23:69.19:0,69,1006	0/0:21,0:18:51.15:0,51,736	0/0:30,0:30:90.30:0,90,1348	0/0:12,0:12:36.10:0,36,518	0/0:7,0:6:18.06:0,18,270	1/1:0,19:19:54.17:681,54,0	1/1:1,12:13:30.10:382,30,0	0/0:21,0:21:57.19:0,57,853	0/0:22,0:22:66.22:0,66,989	0/0:34,0:32:84.26:0,84,1216	0/0:19,0:19:48.16:0,48,719
chr10	33921246	.	G	GAA	12305.59	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-7.320;DP=451;FS=1.909;HRun=8;HaplotypeScore=58.8236;InbreedingCoeff=0.8899;MQ=59.15;MQ0=3;MQRankSum=-0.404;QD=30.69;ReadPosRankSum=1.638;VQSLOD=4.9039;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,27:33:63.21:994,63,0	1/1:0,4:5:15.04:209,15,0	0/0:7,0:3:6.49:0,6,68	0/0:7,0:5:13.59:0,14,137	1/1:4,33:38:87.18:1244,87,0	1/1:1,6:7:18.06:286,18,0	1/1:0,7:8:20.56:294,21,0	1/1:8,14:24:38.43:697,38,0	1/1:0,6:6:14.85:238,15,0	1/1:0,23:24:65.71:1009,66,0	1/1:3,13:17:37.01:551,37,0	0/0:7,0:7:7.13:0,7,22	1/1:0,10:10:24.08:363,24,0	1/1:4,6:10:18.06:286,18,0	1/1:2,0:10:12.48:43,12,0	1/1:2,8:10:18.03:259,18,0	1/1:3,27:30:63.21:1000,63,0	1/1:5,21:25:50.54:770,51,0	1/1:7,18:25:65.65:921,66,0	1/1:4,18:23:54.13:782,54,0	1/1:3,10:15:30.10:457,30,0	1/1:2,3:5:8.94:87,9,0	0/0:19,0:19:11.65:0,12,35	0/0:10,0:10:9.17:0,9,28	1/1:5,10:16:21.07:333,21,0	1/1:3,10:13:30.09:454,30,0	1/1:4,23:27:51.17:791,51,0	1/1:4,11:16:15.05:238,15,0
chr10	33921251	.	A	AG	1074.31	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=5.143;DP=432;FS=8.909;HRun=0;HaplotypeScore=86.0960;InbreedingCoeff=0.7773;MQ=62.25;MQ0=3;MQRankSum=-3.331;QD=26.20;ReadPosRankSum=-0.136;VQSLOD=3.7016;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:58.65:0,59,333	0/0:6,0:6:14.37:0,14,78	0/0:9,0:5:14.17:0,14,138	0/0:8,0:6:17.26:0,17,201	0/0:38,0:38:86.06:0,86,517	0/0:8,0:8:23.55:0,24,153	0/0:8,0:8:12.84:0,13,90	0/0:24,0:24:66.77:0,67,442	0/0:6,0:6:14.44:0,14,80	0/0:25,0:25:61.73:0,62,409	0/0:15,0:15:38.59:0,39,221	1/1:1,4:5:12.04:175,12,0	0/0:11,0:11:26:0,26,153	0/0:8,0:8:22.73:0,23,149	0/1:9,0:9:12.24:22,0,12	0/0:9,0:9:17.38:0,17,115	0/0:28,0:28:63.46:0,63,359	0/0:24,0:23:45.40:0,45,283	0/0:25,0:24:54.71:0,55,361	0/0:23,0:23:64.94:0,65,414	0/0:12,0:12:29.15:0,29,166	0/0:3,0:3:5.91:0,6,38	1/1:5,14:19:56.99:736,57,0	1/1:2,6:8:21.06:287,21,0	0/0:17,0:17:35.56:0,36,258	0/0:12,0:12:35.37:0,35,236	0/0:28,0:27:60.94:0,61,360	0/0:14,0:14:17.60:0,18,109
chr10	33921335	.	T	TA	1125.90	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-0.623;DP=509;FS=0.660;HRun=7;HaplotypeScore=51.1178;InbreedingCoeff=0.9482;MQ=70.23;MQ0=0;MQRankSum=-0.191;QD=25.59;ReadPosRankSum=0.798;VQSLOD=3.9245;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:54.09:0,54,521	0/0:4,0:4:12.02:0,12,116	0/0:12,0:12:24.02:0,24,228	0/0:2,0:2:6.01:0,6,58	0/0:30,0:30:69.06:0,69,654	0/0:12,0:12:33.05:0,33,319	0/0:7,0:7:18.01:0,18,168	0/0:35,0:35:90.09:0,90,852	0/0:10,0:10:27.04:0,27,261	0/0:18,0:18:42.05:0,42,401	0/0:22,0:22:56.98:0,57,526	1/1:0,11:11:33.10:399,33,0	0/0:16,0:16:42.07:0,42,405	0/0:12,0:12:36.05:0,36,342	0/0:14,0:14:36.05:0,36,342	0/0:17,0:17:48.08:0,48,463	0/0:21,0:21:54.07:0,54,515	0/0:23,0:23:54.08:0,54,521	0/0:26,0:27:68.06:0,68,623	0/0:35,0:35:89.91:0,90,847	0/0:19,0:19:48.08:0,48,463	0/0:11,0:11:27.04:0,27,261	1/1:5,13:18:39.12:471,39,0	1/1:2,13:15:33.10:399,33,0	0/0:32,0:32:84.12:0,84,806	0/0:28,0:28:84.09:0,84,795	0/0:24,0:24:66.07:0,66,624	0/0:12,0:12:24.01:0,24,224
chr10	33922190	.	T	TAAA	2314.40	PASS	AB=0.719;AC=17;AF=0.304;AN=56;BaseQRankSum=1.696;DP=459;FS=2.672;HRun=12;HaplotypeScore=74.2885;InbreedingCoeff=0.7548;MQ=68.34;MQ0=3;MQRankSum=0.103;QD=15.64;ReadPosRankSum=-0.036;VQSLOD=2.0822;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:2,0:18:41.18:0,41,249	0/0:13,0:13:39.11:0,39,437	0/0:24,0:15:13.33:0,13,100	0/1:14,0:10:8.49:8,0,102	1/1:8,17:27:42.10:703,42,0	1/1:2,12:19:42.06:658,42,0	1/1:5,8:14:18.04:298,18,0	0/0:27,0:30:74.86:0,75,773	1/1:1,6:8:18.06:273,18,0	0/0:16,0:17:35.97:0,36,388	0/0:21,0:22:35.83:0,36,385	1/1:2,0:13:9.97:22,10,0	0/0:8,0:9:17.92:0,18,185	0/0:16,0:15:30.02:0,30,336	1/1:2,0:10:7.48:16,7,0	0/0:11,0:12:36.04:0,36,388	1/1:5,10:19:33.04:517,33,0	0/0:16,0:17:35.89:0,36,388	0/0:17,0:18:34.51:0,35,401	0/0:22,0:23:50.97:0,51,543	0/0:5,0:5:9.02:0,9,101	0/0:9,0:9:14.94:0,15,168	0/1:4,0:11:1.51:2,0,55	0/1:2,0:12:8.99:9,0,21	0/0:21,0:21:42.01:0,42,471	0/0:21,0:22:44.89:0,45,489	0/0:22,0:22:66.12:0,66,722	0/0:7,0:9:20.92:0,21,204
chr10	33922584	.	CT	C	108.23	PASS	AC=2;AF=0.100;AN=20;BaseQRankSum=3.915;DP=300;FS=0.000;HRun=9;HaplotypeScore=30.5382;InbreedingCoeff=0.6694;MQ=18.40;MQ0=205;MQRankSum=-1.891;QD=7.73;ReadPosRankSum=0.289;VQSLOD=-0.1774;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	0/0:15,0:10:30:0,30,328	./.	./.	0/0:14,0:6:12.04:0,12,138	./.	./.	./.	./.	0/0:15,1:6:14.88:0,15,153	0/0:22,1:13:6.49:0,6,70	./.	./.	./.	./.	./.	./.	./.	./.	0/0:27,0:20:54.05:0,54,591	./.	0/0:13,0:7:9.03:0,9,104	1/1:1,13:12:21:192,21,0	./.	0/0:21,0:8:23.96:0,24,245	0/0:12,0:3:3.01:0,3,35	./.	0/0:7,0:7:12.04:0,12,138
chr10	33922621	.	TA	T	226.92	PASS	AC=2;AF=0.100;AN=20;BaseQRankSum=4.129;DP=263;FS=0.000;HRun=2;HaplotypeScore=22.0476;InbreedingCoeff=0.5496;MQ=14.66;MQ0=208;MQRankSum=-2.977;QD=22.69;ReadPosRankSum=-0.543;VQSLOD=3.0117;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	0/0:11,0:6:18.06:0,18,267	./.	./.	0/0:11,0:3:9.03:0,9,135	./.	./.	./.	./.	0/0:14,0:3:9.03:0,9,134	0/0:12,0:6:6.49:0,6,90	./.	./.	./.	./.	./.	./.	./.	./.	0/0:20,0:14:30.10:0,30,447	./.	0/0:9,0:3:6.02:0,6,90	1/1:0,10:8:24.08:311,24,0	./.	0/0:18,0:4:6.02:0,6,90	0/0:9,0:2:2.97:0,3,20	./.	0/0:7,0:6:12.04:0,12,180
chr10	33923285	.	TAC	T	1184.06	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.863;DP=591;FS=1.641;HRun=0;HaplotypeScore=72.5031;InbreedingCoeff=0.9926;MQ=52.50;MQ0=7;MQRankSum=-1.561;QD=31.16;ReadPosRankSum=-0.074;VQSLOD=5.2851;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:75.26:0,75,1433	0/0:10,0:10:27.09:0,27,493	0/0:23,0:14:42.14:0,42,797	0/0:22,0:12:30.10:0,30,562	0/0:35,0:35:93.32:0,93,1783	0/0:26,0:26:66.23:0,66,1274	0/0:16,0:16:42.14:0,42,791	0/0:38,0:38:99:0,111,2117	0/0:16,0:16:42.14:0,42,811	0/0:28,0:27:78.27:0,78,1495	0/0:18,0:18:54.16:0,54,1005	1/1:1,15:16:45.15:687,45,0	0/0:15,0:15:42.14:0,42,811	0/0:26,0:26:63.22:0,63,1193	0/0:15,0:15:45.15:0,45,869	0/0:20,0:20:54.18:0,54,1024	0/0:35,0:35:99:0,102,1939	0/0:23,0:22:66.23:0,66,1253	0/0:17,0:14:42.14:0,42,792	0/0:20,0:20:51.17:0,51,984	0/0:14,0:14:42.14:0,42,803	0/0:21,0:21:57.20:0,57,1098	1/1:2,10:11:15.05:226,15,0	1/1:1,9:10:27.09:411,27,0	0/0:34,0:34:90.31:0,90,1736	0/0:16,0:16:48.16:0,48,919	0/0:31,0:31:90.29:0,90,1683	0/0:8,0:8:24.08:0,24,463
chr10	33923324	.	TC	T	843.61	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.279;DP=539;FS=5.184;HRun=1;HaplotypeScore=60.5076;InbreedingCoeff=0.9859;MQ=62.11;MQ0=0;MQRankSum=-3.522;QD=29.09;ReadPosRankSum=-1.436;VQSLOD=2.8539;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:72.24:0,72,1075	0/0:19,0:19:54.15:0,54,769	0/0:10,1:8:23.91:0,24,287	0/0:12,0:11:20.73:0,21,199	0/0:42,0:42:99:0,123,1727	0/0:21,0:21:63.17:0,63,880	0/0:14,0:14:42.14:0,42,625	0/0:29,0:29:87.22:0,87,1140	0/0:17,0:17:51.17:0,51,758	0/0:27,0:27:81.24:0,81,1139	0/0:23,0:23:60.07:0,60,816	1/1:4,8:12:33.09:429,33,0	0/0:15,0:15:45.09:0,45,633	0/0:17,0:17:51.16:0,51,727	0/0:15,0:15:45.15:0,45,671	0/0:21,0:21:63.19:0,63,900	0/0:23,0:23:66.22:0,66,977	0/0:18,0:18:48.16:0,48,716	0/0:16,0:16:48.15:0,48,685	0/0:21,0:21:63.16:0,63,893	0/0:9,0:9:27.08:0,27,382	0/0:21,0:21:60.13:0,60,836	1/1:1,11:12:30.10:413,30,0	1/1:1,4:5:12.03:141,12,0	0/0:33,0:33:96.31:0,96,1387	0/0:18,0:18:54.12:0,54,710	0/0:29,0:29:87.20:0,87,1214	0/0:13,0:13:39.05:0,39,515
chr10	33923871	.	AC	A	2426.37	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=12.359;DP=654;FS=0.470;HRun=4;HaplotypeScore=76.6075;InbreedingCoeff=0.9928;MQ=79.49;MQ0=0;MQRankSum=-1.106;QD=33.24;ReadPosRankSum=2.863;VQSLOD=4.2801;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,105,1447	0/0:8,0:8:21.07:0,21,315	0/0:29,0:30:83.87:0,84,1181	0/0:22,0:21:35.09:0,35,762	0/0:18,0:18:51.17:0,51,758	0/0:23,0:23:66.16:0,66,906	0/0:25,0:25:75.25:0,75,1124	0/0:27,0:27:78.23:0,78,1128	0/0:21,0:21:63.21:0,63,944	0/0:24,0:24:66.21:0,66,952	0/0:19,0:19:57.18:0,57,822	1/1:0,26:26:75.24:973,75,0	0/0:20,0:20:60.19:0,60,877	0/0:28,0:28:76.13:0,76,1105	0/0:19,0:19:57.18:0,57,828	0/0:18,0:18:51.14:0,51,724	0/0:25,0:25:75.21:0,75,1094	0/0:20,0:20:60.20:0,60,899	0/0:27,0:27:75.22:0,75,1059	0/0:22,0:22:63.19:0,63,902	0/0:53,0:53:99:0,149,2182	0/0:18,0:18:43.08:0,43,629	1/1:0,21:21:54.15:701,54,0	1/1:0,26:26:69.22:896,69,0	0/0:24,0:24:72.17:0,72,1030	0/0:23,0:23:65.57:0,66,931	0/0:23,0:23:69.23:0,69,1013	0/0:7,0:7:15.02:0,15,202
chr10	33924676	.	TTAAATAAA	T	536.92	PASS	AC=10;AF=0.200;AN=50;BaseQRankSum=0.082;DP=247;FS=0.000;HRun=0;HaplotypeScore=64.6867;InbreedingCoeff=0.4669;MQ=60.70;MQ0=5;MQRankSum=-4.363;QD=9.26;ReadPosRankSum=-0.662;VQSLOD=1.3841;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:8:9.03:0,9,289	0/0:4,0:5:3.01:0,3,105	./.	./.	1/1:9,2:11:6.02:144,6,0	1/1:5,6:11:3.01:74,3,0	1/1:3,3:6:5.98:94,6,0	0/0:25,0:22:21.07:0,21,573	1/1:6,3:9:5.99:95,6,0	0/0:9,0:9:6.02:0,6,245	0/0:5,0:5:3:0,3,26	0/0:6,0:6:5.93:0,6,120	0/0:4,0:4:6.02:0,6,184	0/0:9,0:9:3.01:0,3,95	0/0:7,0:9:9.03:0,9,315	0/0:6,0:6:6.02:0,6,245	1/1:12,9:20:14.96:263,15,0	0/0:6,0:10:6.02:0,6,209	0/0:9,0:9:3.01:0,3,105	0/0:8,0:9:3.01:0,3,105	0/0:4,0:4:6.02:0,6,200	./.	0/0:5,0:5:3.01:0,3,122	0/0:7,0:7:5.98:0,6,142	0/0:9,0:11:12.04:0,12,434	0/0:7,0:7:6.02:0,6,186	0/0:7,0:7:3.01:0,3,99	0/0:5,0:11:27.09:0,27,910
chr10	33924747	.	T	TAGA	534.67	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=4.844;DP=309;FS=5.239;HRun=0;HaplotypeScore=50.2602;InbreedingCoeff=0.7476;MQ=70.36;MQ0=0;MQRankSum=-1.722;QD=23.25;ReadPosRankSum=-0.908;VQSLOD=2.7650;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:36.12:0,36,563	0/0:5,0:5:12.04:0,12,191	0/0:11,0:11:25.82:0,26,400	0/1:10,0:9:4.51:5,0,188	0/0:10,0:10:30.10:0,30,482	0/0:12,0:12:21.07:0,21,332	0/0:8,0:8:15.05:0,15,241	0/0:22,0:22:54.18:0,54,847	0/0:7,0:7:18.06:0,18,289	0/0:13,0:13:36.12:0,36,570	0/0:7,0:7:18.06:0,18,289	1/1:1,4:5:12.04:265,12,0	0/0:11,0:11:33.11:0,33,529	0/0:10,0:10:24.08:0,24,386	0/0:9,0:9:24.08:0,24,385	0/0:10,0:10:30.10:0,30,480	0/0:23,0:23:51.17:0,51,805	0/0:15,0:15:36.08:0,36,535	0/0:23,0:23:66.18:0,66,1003	0/0:18,0:18:51.17:0,51,820	0/0:3,0:3:9.03:0,9,144	0/0:4,0:4:12.04:0,12,193	1/1:1,4:5:15.05:327,15,0	1/1:1,2:3:3.01:66,3,0	0/0:10,0:10:27.09:0,27,434	0/0:15,0:15:45.15:0,45,723	0/0:14,0:14:42.14:0,42,675	0/0:12,0:12:30.09:0,30,458
chr10	33925157	.	TG	T	589.27	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.234;DP=606;FS=0.000;HRun=4;HaplotypeScore=66.7328;InbreedingCoeff=0.8954;MQ=85.32;MQ0=0;MQRankSum=-2.745;QD=28.06;ReadPosRankSum=1.441;VQSLOD=3.0728;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:39.13:0,39,546	0/0:4,0:4:9.03:0,9,126	0/0:24,0:24:60.19:0,60,809	0/0:32,0:29:46.45:0,46,989	0/0:28,0:28:84.27:0,84,1156	0/0:20,0:20:51.17:0,51,710	0/0:21,0:21:60.16:0,60,818	0/0:29,0:29:87.28:0,87,1202	0/0:17,0:17:51.17:0,51,714	0/0:26,0:26:72.23:0,72,983	0/0:27,0:27:78.24:0,78,1060	0/0:22,0:22:63.21:0,63,878	0/0:22,0:22:63.21:0,63,877	0/0:17,0:17:48.15:0,48,652	1/1:1,20:21:57.17:684,57,0	0/0:21,0:21:57.19:0,57,798	0/0:29,0:29:84.28:0,84,1176	0/0:11,0:11:30.05:0,30,381	0/0:21,0:21:60.18:0,60,820	0/0:33,0:33:96.31:0,96,1325	0/0:21,0:21:57.18:0,57,781	0/0:23,0:23:66.22:0,66,919	0/0:17,0:17:51.16:0,51,697	0/0:23,0:23:69.22:0,69,949	0/0:20,0:20:54.18:0,54,755	0/0:24,0:24:69.22:0,69,951	0/0:31,0:31:87.28:0,87,1197	0/0:3,0:3:9.03:0,9,126
chr10	33925282	.	CA	C	7533.47	PASS	AB=0.562;AC=42;AF=0.750;AN=56;BaseQRankSum=-2.724;DP=593;FS=1.505;HRun=12;HaplotypeScore=74.3559;InbreedingCoeff=0.7299;MQ=70.42;MQ0=1;MQRankSum=1.283;QD=15.76;ReadPosRankSum=4.754;VQSLOD=5.7654;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:32:80.04:0,80,768	1/1:4,14:19:43.85:331,44,0	0/0:11,0:11:9.02:0,9,89	0/0:8,0:8:0.15:0,0,77	1/1:8,23:31:54.98:422,55,0	1/1:3,20:23:56.76:441,57,0	1/1:2,16:18:44.82:348,45,0	1/1:4,16:21:11.35:271,11,0	1/1:6,13:20:40.82:306,41,0	1/1:8,23:31:62.67:487,63,0	1/1:4,18:22:38.99:380,39,0	0/0:2,0:18:31.78:0,32,186	1/1:7,23:30:39.69:461,40,0	1/1:3,12:16:31.88:238,32,0	1/1:0,15:15:41.84:325,42,0	1/1:3,17:21:40.88:308,41,0	1/1:4,14:18:41.83:325,42,0	1/1:1,9:11:28.93:215,29,0	1/1:3,7:10:23.77:176,24,0	1/1:6,23:29:35.26:457,35,0	1/1:6,19:26:30.38:311,30,0	0/1:5,12:18:42.59:201,0,43	0/0:8,0:29:60.86:0,61,336	0/0:3,0:17:20.05:0,20,116	0/1:4,21:25:30.10:315,0,30	1/1:5,20:27:10.32:391,10,0	1/1:5,27:33:76.74:586,77,0	1/1:0,12:13:31.92:238,32,0
chr10	33926047	.	A	AG	1701.74	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=2.940;DP=580;FS=0.523;HRun=7;HaplotypeScore=65.2745;InbreedingCoeff=0.9990;MQ=80.39;MQ0=0;MQRankSum=-4.012;QD=29.86;ReadPosRankSum=-0.661;VQSLOD=3.8062;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:45.02:0,45,587	0/0:13,0:13:39.06:0,39,377	0/0:22,0:22:37.21:0,37,398	0/0:31,0:27:52.97:0,53,472	0/0:39,0:39:99:0,102,985	0/0:27,0:27:65.06:0,65,686	0/0:19,0:19:42.01:0,42,424	0/0:27,0:27:39.03:0,39,372	0/0:16,0:16:39.06:0,39,376	0/0:31,0:31:93.14:0,93,894	0/0:29,0:29:84.13:0,84,811	1/1:1,18:19:54.17:649,54,0	0/0:18,0:18:48.08:0,48,463	0/0:16,0:16:45.07:0,45,434	0/0:17,0:17:51.08:0,51,493	0/0:20,0:20:51.08:0,51,492	0/0:20,0:20:57.09:0,57,550	0/0:16,0:16:45.07:0,45,434	0/0:16,0:16:42.04:0,42,398	0/0:21,0:21:57.08:0,57,545	0/0:10,0:10:24.03:0,24,232	0/0:16,0:16:42.05:0,42,400	1/1:5,17:22:57.15:665,57,0	1/1:3,13:16:45.13:531,45,0	0/0:20,0:20:51.08:0,51,493	0/0:13,0:13:36.06:0,36,347	0/0:23,0:23:60.09:0,60,579	0/0:18,0:18:54.09:0,54,521
chr10	33926095	.	AC	A	1700.48	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.009;DP=564;FS=0.000;HRun=1;HaplotypeScore=57.8495;InbreedingCoeff=0.9982;MQ=80.82;MQ0=0;MQRankSum=-3.711;QD=34.01;ReadPosRankSum=0.956;VQSLOD=3.3088;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:78.16:0,78,1084	0/0:11,0:11:33:0,33,415	0/0:32,0:31:89.88:0,90,1216	0/0:16,1:18:38.31:0,38,593	0/0:34,0:34:99:0,102,1469	0/0:30,0:30:90.30:0,90,1313	0/0:18,0:18:51.63:0,52,726	0/0:22,0:22:66.20:0,66,916	0/0:17,0:17:48.15:0,48,683	0/0:21,0:20:63.19:0,63,879	0/0:25,0:25:72.23:0,72,1033	1/1:2,11:13:39.12:527,39,0	0/0:19,0:19:57.18:0,57,792	0/0:15,0:15:45.10:0,45,597	0/0:15,0:15:45.04:0,45,575	0/0:24,0:24:72.24:0,72,1053	0/0:17,0:17:51.12:0,51,700	0/0:13,0:13:39.13:0,39,568	0/0:19,0:19:57.18:0,57,818	0/0:35,0:35:99:0,105,1515	0/0:10,0:10:30.10:0,30,439	0/0:17,0:17:51.16:0,51,725	1/1:2,24:26:69.98:1023,70,0	1/1:0,11:11:21.07:293,21,0	0/0:24,0:24:69.23:0,69,1009	0/0:16,0:16:48.16:0,48,683	0/0:21,0:21:63.21:0,63,921	0/0:15,0:15:45.15:0,45,640
chr10	33927155	.	A	AC	11055.66	PASS	AB=0.614;AC=41;AF=0.732;AN=56;BaseQRankSum=-11.341;DP=610;FS=1.737;HRun=8;HaplotypeScore=88.0769;InbreedingCoeff=0.9064;MQ=58.67;MQ0=6;MQRankSum=6.905;QD=25.07;ReadPosRankSum=4.583;VQSLOD=5.2582;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:74.96:0,75,672	1/1:0,11:11:27.05:311,27,0	0/0:35,0:23:57.02:0,57,519	0/0:23,0:16:20.14:0,20,335	1/1:3,17:20:51.15:588,51,0	1/1:5,18:23:26.70:561,27,0	1/1:5,25:27:29.57:595,30,0	0/1:10,17:26:12.83:362,0,13	1/1:0,17:17:45.13:520,45,0	1/1:6,19:23:46.71:550,47,0	1/1:1,24:25:69.13:770,69,0	0/0:5,0:25:40.77:0,41,126	1/1:3,11:14:30.08:337,30,0	1/1:0,17:17:42.12:485,42,0	0/0:18,0:18:48.01:0,48,435	1/1:2,14:16:36.11:415,36,0	1/1:3,24:27:69.20:791,69,0	1/1:5,23:28:67.72:804,68,0	1/1:3,9:14:35.92:383,36,0	1/1:3,19:22:54.12:608,54,0	1/1:4,21:25:51.15:588,51,0	1/1:4,13:17:24.07:271,24,0	0/0:6,0:18:36.14:0,36,142	0/0:2,0:11:14.62:0,15,45	1/1:4,7:11:24.07:274,24,0	1/1:6,22:28:60.18:691,60,0	1/1:2,25:27:60.18:692,60,0	1/1:3,14:17:17.67:457,18,0
chr10	33927209	.	GGACCCAT	G	769.72	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.278;DP=602;FS=0.000;HRun=0;HaplotypeScore=153.1683;InbreedingCoeff=0.9350;MQ=58.42;MQ0=4;MQRankSum=-5.707;QD=23.32;ReadPosRankSum=-0.062;VQSLOD=2.7596;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,27:33:39.06:865,39,0	0/0:4,0:4:8.87:0,9,359	0/0:21,0:10:27.05:0,27,893	0/0:34,0:28:81.22:0,81,2881	0/0:22,0:22:66.18:0,66,2377	0/0:25,0:25:72.23:0,72,2752	0/0:19,0:19:51.09:0,51,1807	0/0:35,0:35:99:0,102,3857	0/0:18,0:18:48.16:0,48,1917	0/0:19,0:19:57.20:0,57,2245	0/0:14,0:14:39.13:0,39,1513	0/0:27,0:26:69.24:0,69,2737	0/0:16,0:16:39.13:0,39,1558	0/0:27,0:27:75.26:0,75,2893	0/0:22,0:22:66.21:0,66,2532	0/0:16,0:16:42.14:0,42,1651	0/0:28,0:28:84.27:0,84,3126	0/0:37,0:37:99:0,111,4055	0/0:19,0:17:45.10:0,45,1593	0/0:16,0:16:45.15:0,45,1696	0/0:36,0:36:96.29:0,96,3702	0/0:10,0:10:18.06:0,18,702	0/0:12,0:12:33.11:0,33,1302	0/0:15,0:14:42.14:0,42,1656	0/0:15,0:15:42.14:0,42,1643	0/0:25,0:25:72.16:0,72,2774	0/0:24,0:24:66.22:0,66,2537	0/0:13,0:13:39.13:0,39,1559
chr10	33927388	.	A	AG	1479.69	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=6.755;DP=571;FS=20.274;HRun=5;HaplotypeScore=99.7850;InbreedingCoeff=0.9975;MQ=64.86;MQ0=0;MQRankSum=-0.772;QD=32.17;ReadPosRankSum=3.481;VQSLOD=1.9470;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:92.03:0,92,944	0/0:8,0:8:24.05:0,24,250	0/0:23,1:22:49.20:0,49,534	0/0:25,0:23:51.02:0,51,515	0/0:30,0:30:84.12:0,84,875	0/0:31,0:31:90.17:0,90,936	0/0:17,0:17:39.04:0,39,387	0/0:21,0:21:51.12:0,51,548	0/0:17,0:17:45.10:0,45,475	0/0:24,0:23:57.14:0,57,612	0/0:23,0:23:60.11:0,60,632	1/1:4,15:18:48.16:627,48,0	0/0:13,0:13:33.08:0,33,354	0/0:19,0:19:48.06:0,48,496	0/0:15,0:15:42.09:0,42,443	0/0:13,0:13:33.07:0,33,347	0/0:18,0:18:45.03:0,45,456	0/0:19,0:19:48.09:0,48,503	0/0:23,0:23:60.14:0,60,639	0/0:26,0:26:66.16:0,66,708	0/0:21,0:21:60.14:0,60,638	0/0:9,0:9:21.05:0,21,226	1/1:2,12:14:42.10:522,42,0	1/1:0,13:13:36.12:474,36,0	0/0:14,0:14:39.10:0,39,419	0/0:22,0:22:66.16:0,66,702	0/0:33,0:32:96.23:0,96,1024	0/0:22,0:22:66.17:0,66,709
chr10	33928015	.	GAAA	G	1644.66	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.764;DP=583;FS=0.585;HRun=9;HaplotypeScore=91.0004;InbreedingCoeff=0.9950;MQ=71.75;MQ0=0;MQRankSum=-1.552;QD=31.63;ReadPosRankSum=1.042;VQSLOD=2.8439;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:96.31:0,96,1949	0/0:8,0:8:24.08:0,24,507	0/0:24,0:24:56.73:0,57,966	0/0:21,0:19:32.65:0,33,777	0/0:23,0:23:60.21:0,60,1262	0/0:25,0:27:75.17:0,75,1467	0/0:18,0:18:48.16:0,48,1020	0/0:28,0:28:66.22:0,66,1346	0/0:19,0:19:42.06:0,42,845	0/0:26,0:26:72.24:0,72,1452	0/0:15,0:15:39.13:0,39,828	1/1:2,18:20:54.18:766,54,0	0/0:19,0:19:54.19:0,54,1102	0/0:24,0:24:63.22:0,63,1326	0/0:8,0:8:18.06:0,18,382	0/0:10,0:10:24.08:0,24,499	0/0:34,0:34:99:0,99,2001	0/0:22,0:21:60.21:0,60,1273	0/0:17,0:17:45.15:0,45,892	0/0:28,0:28:75.26:0,75,1574	0/0:16,0:16:45.14:0,45,916	0/0:19,0:19:54.17:0,54,1108	1/1:0,19:19:44.68:638,45,0	1/1:1,12:13:27.09:383,27,0	0/0:23,0:23:66.22:0,66,1342	0/0:33,0:34:81.25:0,81,1643	0/0:23,0:23:60.21:0,60,1257	0/0:9,0:10:30.10:0,30,615
chr10	33929317	.	GT	G	483.27	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=4.572;DP=465;FS=11.581;HRun=8;HaplotypeScore=96.0875;InbreedingCoeff=0.9665;MQ=75.88;MQ0=6;MQRankSum=-6.263;QD=15.59;ReadPosRankSum=0.501;VQSLOD=2.5307;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:48.43:0,48,582	0/0:9,0:9:27.06:0,27,302	0/0:21,0:11:22.24:0,22,225	0/0:22,0:20:42:0,42,439	0/0:29,0:29:75.22:0,75,896	0/0:24,0:24:66.20:0,66,787	0/0:7,0:7:12.04:0,12,145	0/0:27,0:27:74.87:0,75,853	0/0:19,0:19:48.15:0,48,580	0/0:19,0:19:54.17:0,54,652	0/0:18,0:18:45.14:0,45,543	1/1:1,6:7:20.89:161,21,0	0/0:12,0:12:27.08:0,27,326	0/0:14,0:14:33.09:0,33,389	0/0:19,0:19:54.14:0,54,630	0/0:10,0:10:24.05:0,24,268	0/0:18,0:18:42.13:0,42,506	0/0:8,0:8:18.02:0,18,202	0/0:19,0:19:45:0,45,521	0/0:27,0:27:40.25:0,40,758	0/0:7,0:7:21.05:0,21,243	0/0:7,0:7:18.05:0,18,207	1/1:5,11:15:41.94:357,42,0	1/1:5,3:8:11.97:104,12,0	0/0:18,0:18:45.14:0,45,540	0/0:16,0:16:39.12:0,39,471	0/0:29,0:29:81.22:0,81,952	0/0:11,0:11:33.10:0,33,399
chr10	33929327	.	G	GTTTT	1238.59	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=2.475;DP=471;FS=3.820;HRun=6;HaplotypeScore=131.8914;InbreedingCoeff=0.9626;MQ=66.59;MQ0=8;MQRankSum=-6.984;QD=41.29;ReadPosRankSum=0.855;VQSLOD=1.1516;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:27.69:0,28,634	0/0:10,0:10:27.06:0,27,341	0/0:19,0:9:13.16:0,13,187	0/0:17,0:15:29.05:0,29,391	0/0:27,0:27:69.19:0,69,963	0/0:25,0:25:57.16:0,57,786	0/0:8,0:8:15.03:0,15,209	0/0:28,0:28:63.15:0,63,879	0/0:20,0:21:53.80:0,54,752	0/0:22,0:22:63.17:0,63,827	0/0:18,0:17:51.14:0,51,658	1/1:2,6:8:24.08:539,24,0	0/0:14,0:14:36.09:0,36,469	0/0:13,0:13:27.06:0,27,379	0/0:15,0:15:42.13:0,42,556	0/0:7,0:7:21.07:0,21,282	0/0:19,0:19:39.09:0,39,532	0/0:12,0:12:23.02:0,23,277	0/0:21,0:20:54.10:0,54,667	0/0:27,0:27:63.13:0,63,834	0/0:8,0:8:21:0,21,274	0/0:6,0:6:14.92:0,15,194	1/1:6,9:14:36.12:713,36,0	1/1:5,2:7:11.89:125,12,0	0/0:21,0:21:45.13:0,45,613	0/0:17,0:17:42.12:0,42,567	0/0:31,0:31:81.20:0,81,1086	0/0:14,0:13:27.51:0,28,397
chr10	33929332	.	TTG	T	477.05	PASS	AB=0.888;AC=4;AF=0.071;AN=56;BaseQRankSum=4.385;DP=459;FS=7.380;HRun=0;HaplotypeScore=116.8130;InbreedingCoeff=0.5727;MQ=61.34;MQ0=8;MQRankSum=-6.143;QD=15.90;ReadPosRankSum=0.322;VQSLOD=3.1079;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:29.16:0,29,846	0/0:9,0:9:27.07:0,27,427	0/0:16,0:7:13.39:0,13,202	0/0:13,0:11:29.27:0,29,389	0/0:25,0:25:72.22:0,72,1175	0/0:21,0:21:57.18:0,57,913	0/0:8,0:8:21.07:0,21,344	0/0:28,0:28:78.20:0,78,1122	0/0:21,0:21:53.54:0,54,913	0/0:22,0:22:63.21:0,63,1029	0/0:18,0:17:51.14:0,51,814	0/1:8,1:9:66.38:145,0,66	0/0:16,0:16:39.07:0,39,602	0/0:16,0:16:36.07:0,36,528	0/0:14,0:14:42.14:0,42,720	0/0:8,0:8:24.06:0,24,386	0/0:18,0:18:39.10:0,39,629	0/0:12,0:12:30.69:0,31,415	0/0:20,0:19:54.11:0,54,793	0/0:23,0:23:66.21:0,66,1079	0/0:7,0:7:21:0,21,313	0/0:7,0:7:18.04:0,18,277	1/1:12,2:13:13.27:373,13,0	0/1:6,1:7:1.99:71,0,2	0/0:21,0:21:48.12:0,48,760	0/0:14,0:14:42.13:0,42,687	0/0:33,0:33:90.21:0,90,1408	0/0:15,0:14:37.61:0,38,516
chr10	33929352	.	G	GTTT	14858.22	PASS	AB=1.000;AC=50;AF=0.893;AN=56;BaseQRankSum=-4.265;DP=471;FS=14.608;HRun=7;HaplotypeScore=75.9491;InbreedingCoeff=0.6901;MQ=68.74;MQ0=9;MQRankSum=-3.079;QD=33.54;ReadPosRankSum=6.013;VQSLOD=2.0404;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,19:24:36.12:721,36,0	1/1:0,8:8:21.07:436,21,0	0/0:15,0:14:27.05:0,27,358	0/0:12,0:12:23.28:0,23,333	1/1:7,18:24:39.11:747,39,0	1/1:4,18:21:27.09:560,27,0	1/1:0,10:10:15.05:311,15,0	1/1:5,17:25:62.79:931,63,0	1/1:4,16:22:39.11:747,39,0	1/1:2,16:20:51.13:943,51,0	1/1:2,16:18:42.07:788,42,0	0/1:1,0:11:5.16:80,0,5	1/1:3,14:17:27.09:544,27,0	1/1:4,11:15:21.07:424,21,0	1/1:0,19:19:39.13:809,39,0	1/1:1,11:11:21.07:436,21,0	1/1:4,16:19:23.91:450,24,0	1/1:2,9:10:20.66:402,21,0	1/1:3,10:14:33.09:629,33,0	1/1:4,24:32:60.12:1044,60,0	1/1:1,3:4:12.04:226,12,0	1/1:2,9:11:12:201,12,0	1/1:1,0:12:17.12:166,17,0	0/1:1,0:6:1.65:14,0,2	1/1:0,16:17:33.11:685,33,0	1/1:3,14:17:33.11:653,33,0	1/1:5,26:31:66.23:1335,66,0	1/1:9,7:14:36.06:576,36,0
chr10	33929521	.	CTG	C	656.23	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=0.233;DP=563;FS=2.025;HRun=0;HaplotypeScore=96.1547;InbreedingCoeff=0.9889;MQ=81.53;MQ0=0;MQRankSum=-1.900;QD=28.53;ReadPosRankSum=2.483;VQSLOD=4.8892;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,20:23:51.17:751,51,0	0/0:13,0:13:39.13:0,39,730	0/0:21,0:21:60.20:0,60,1042	0/0:11,0:11:30.10:0,30,509	0/0:25,0:25:75.24:0,75,1373	0/0:21,0:21:54.19:0,54,1011	0/0:20,0:20:54.17:0,54,970	0/0:28,0:28:81.28:0,81,1496	0/0:24,0:24:66.21:0,66,1195	0/0:23,0:23:69.24:0,69,1293	0/0:19,0:19:54.19:0,54,1002	0/0:16,0:16:45.15:0,45,841	0/0:24,0:24:54.19:0,54,1003	0/0:17,0:17:45.15:0,45,842	0/0:24,0:24:66.21:0,66,1199	0/0:14,0:14:39.13:0,39,731	0/0:22,0:22:51.17:0,51,955	0/0:17,0:17:45.09:0,45,774	0/0:18,0:18:51.17:0,51,954	0/0:29,0:29:84.29:0,84,1572	0/0:18,0:18:51.17:0,51,942	0/0:6,0:6:18.06:0,18,337	0/0:24,0:24:60.21:0,60,1121	0/0:13,0:13:30.10:0,30,561	0/0:30,0:30:81.28:0,81,1517	0/0:24,0:24:69.23:0,69,1263	0/0:31,0:30:87.30:0,87,1625	0/0:8,0:8:24.08:0,24,449
chr10	33929565	.	T	TG	19589.99	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-10.972;DP=590;FS=10.162;HRun=0;HaplotypeScore=60.0551;InbreedingCoeff=0.9974;MQ=77.27;MQ0=0;MQRankSum=-6.222;QD=37.39;ReadPosRankSum=4.628;VQSLOD=4.2200;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:72.15:0,72,985	1/1:1,20:21:51.16:746,51,0	0/0:19,0:19:45.07:0,45,641	0/0:21,0:21:44.01:0,44,512	1/1:0,25:25:72.08:999,72,0	1/1:1,14:15:33.11:482,33,0	1/1:0,20:20:54.18:790,54,0	1/1:0,41:39:99:1593,117,0	1/1:0,23:23:54.18:789,54,0	1/1:1,17:18:51.12:686,51,0	1/1:0,19:19:51.09:719,51,0	1/1:0,14:14:42.14:603,42,0	1/1:0,20:20:45.15:658,45,0	1/1:0,20:20:54.18:779,54,0	1/1:0,21:21:51.17:744,51,0	1/1:1,19:20:46.77:739,47,0	1/1:0,23:23:54.18:789,54,0	1/1:1,17:18:23.27:551,23,0	1/1:0,18:18:54.15:767,54,0	1/1:0,31:31:87.07:1193,87,0	1/1:0,15:15:36.12:526,36,0	1/1:0,11:11:33.03:456,33,0	1/1:1,23:24:57.19:834,57,0	1/1:1,9:10:21.07:305,21,0	1/1:0,28:28:78.26:1141,78,0	1/1:1,27:28:78.21:1080,78,0	1/1:1,27:28:72.24:1051,72,0	1/1:0,13:13:39.13:570,39,0
chr10	33929646	.	CATGCCTTGGCATGT	C	3605.68	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.031;DP=631;FS=7.027;HRun=0;HaplotypeScore=252.6972;InbreedingCoeff=0.9939;MQ=85.29;MQ0=0;MQRankSum=-7.206;QD=85.85;ReadPosRankSum=-0.119;VQSLOD=2.5295;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,117,7712	0/0:11,0:11:27.09:0,27,1469	0/0:15,0:15:18.19:0,18,1734	0/0:31,0:31:87.27:0,87,4198	0/0:27,0:27:81.28:0,81,4719	0/0:22,0:22:63.22:0,63,4102	0/0:26,0:26:75.26:0,75,4957	0/0:22,0:22:60.21:0,60,3819	0/0:21,0:21:51.18:0,51,3471	0/0:23,0:23:66.23:0,66,4373	0/0:17,0:17:51.16:0,51,3394	1/1:4,10:14:39.12:1404,39,0	0/0:20,0:20:48.16:0,48,3232	0/0:23,0:23:66.23:0,66,4446	0/0:25,0:25:69.24:0,69,4760	0/0:22,0:22:63.20:0,63,4039	0/0:24,0:24:69.20:0,69,4384	0/0:16,0:15:42.14:0,42,2500	0/0:26,0:26:72.24:0,72,4220	0/0:38,0:38:99:0,105,6821	0/0:25,0:25:69.20:0,69,4325	0/0:24,0:24:69.24:0,69,4203	1/1:4,16:20:39.12:1544,39,0	1/1:3,5:8:18.04:658,18,0	0/0:18,0:18:54.17:0,54,3548	0/0:28,0:28:81.28:0,81,5085	0/0:26,0:26:72.23:0,72,4150	0/0:18,0:18:51.18:0,51,3413
chr10	33930409	.	A	AT	11050.19	PASS	AB=1.000;AC=46;AF=0.821;AN=56;BaseQRankSum=-5.662;DP=540;FS=2.232;HRun=8;HaplotypeScore=61.3556;InbreedingCoeff=0.7470;MQ=71.95;MQ0=0;MQRankSum=2.327;QD=23.41;ReadPosRankSum=-1.350;VQSLOD=4.9853;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,22:26:57.17:658,57,0	1/1:1,10:11:27:294,27,0	0/1:11,0:11:28.34:28,0,77	0/0:10,0:10:14.16:0,14,149	1/1:26,0:26:62.10:413,62,0	1/1:16,0:16:44.11:283,44,0	1/1:16,0:16:35.44:223,35,0	1/1:4,28:32:84.19:927,84,0	1/1:17,0:17:38.39:241,38,0	1/1:2,29:31:87.22:977,87,0	1/1:2,20:22:60:645,60,0	0/0:12,0:12:36.01:0,36,326	1/1:0,11:11:33.10:381,33,0	1/1:7,17:24:33.10:381,33,0	0/1:17,0:17:29.27:111,0,29	1/1:3,13:16:27.11:372,27,0	1/1:17,0:17:38.34:239,38,0	1/1:0,11:11:33.10:381,33,0	1/1:2,17:19:48.10:533,48,0	1/1:2,30:32:90.19:1010,90,0	1/1:3,9:12:24.07:277,24,0	1/1:1,18:19:46.34:506,46,0	0/0:27,0:27:75.04:0,75,686	0/0:19,0:19:48.02:0,48,439	1/1:3,24:27:60.18:692,60,0	1/1:1,16:17:48.12:537,48,0	1/1:6,21:27:14.39:422,14,0	1/1:0,15:15:45.13:519,45,0
chr10	33930417	.	T	TTA	4981.07	PASS	AB=0.958;AC=35;AF=0.625;AN=56;BaseQRankSum=7.042;DP=537;FS=2.329;HRun=0;HaplotypeScore=93.6065;InbreedingCoeff=0.0913;MQ=74.26;MQ0=0;MQRankSum=-1.902;QD=10.67;ReadPosRankSum=3.904;VQSLOD=4.5843;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:22:15.94:20,0,16	0/1:12,0:12:15.93:16,0,56	0/1:9,0:10:17.51:18,0,126	0/0:12,0:12:22.55:0,23,279	1/1:1,23:26:62.88:1132,63,0	1/1:0,19:19:45.15:826,45,0	1/1:0,16:16:36.12:681,36,0	0/1:31,0:31:22.84:84,0,23	1/1:0,14:14:39.13:737,39,0	1/1:30,0:30:13.22:116,13,0	1/1:20,0:21:29.73:91,30,0	0/0:12,0:12:36.10:0,36,504	0/1:13,0:13:8.66:9,0,28	0/1:18,0:18:9.83:11,0,10	0/1:3,0:19:30.67:92,0,31	0/1:17,0:17:9.17:9,0,13	1/1:0,14:15:39.13:734,39,0	1/1:11,0:11:12.99:28,13,0	1/1:19,0:19:25.50:147,26,0	0/1:33,0:33:24.63:47,0,25	0/1:11,0:11:11.37:15,0,11	0/1:22,0:22:54.34:54,0,58	0/0:28,0:28:75.25:0,75,1094	0/0:18,0:18:48.16:0,48,697	1/1:23,0:23:24.92:51,25,0	0/1:22,0:22:22.28:22,0,94	0/1:28,0:28:0.98:1,0,119	1/1:15,0:15:18.69:39,19,0
chr10	33930949	.	T	TC	1335.05	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.628;DP=388;FS=9.767;HRun=4;HaplotypeScore=43.7371;InbreedingCoeff=0.9605;MQ=94.99;MQ0=0;MQRankSum=-2.807;QD=34.23;ReadPosRankSum=1.735;VQSLOD=3.6210;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:66.14:0,66,728	0/0:11,0:11:33.09:0,33,374	0/0:25,0:24:45.04:0,45,491	0/0:18,0:18:48.13:0,48,536	0/0:13,0:13:39.11:0,39,442	0/0:24,0:24:69.18:0,69,773	0/0:7,0:7:21.06:0,21,238	0/0:28,0:28:72.20:0,72,816	0/0:9,0:9:27.08:0,27,306	0/0:12,0:12:33.09:0,33,374	0/0:11,0:11:33.07:0,33,363	1/1:0,12:12:36.12:492,36,0	0/0:16,0:16:48.12:0,48,530	0/0:15,0:15:45.11:0,45,501	0/0:6,0:6:18.05:0,18,204	0/0:18,0:18:54.15:0,54,612	0/0:19,0:19:45.06:0,45,484	0/0:5,0:5:15.04:0,15,170	0/0:7,0:7:21.06:0,21,238	0/0:13,0:13:36.10:0,36,405	0/0:6,0:6:12.03:0,12,136	0/0:4,0:4:12.03:0,12,136	1/1:1,17:18:48.16:657,48,0	1/1:0,9:9:24.08:328,24,0	0/0:16,0:16:42.12:0,42,476	0/0:14,0:14:39.11:0,39,442	0/0:17,0:17:45.13:0,45,510	0/0:9,0:9:15.04:0,15,170
chr10	33931033	.	AAATAATAAT	A	390.84	PASS	AC=6;AF=0.115;AN=52;BaseQRankSum=0.999;DP=324;FS=1.632;HRun=0;HaplotypeScore=106.5798;InbreedingCoeff=0.6971;MQ=58.74;MQ0=0;MQRankSum=-2.797;QD=13.48;ReadPosRankSum=0.469;VQSLOD=2.3990;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:17:24.08:0,24,658	0/0:4,0:4:9.03:0,9,263	0/0:8,0:7:6.02:0,6,244	./.	0/0:22,0:22:45.62:0,46,1563	0/0:12,0:12:21.07:0,21,810	0/0:3,0:3:9.03:0,9,303	0/0:32,0:32:60.21:0,60,2344	0/0:10,0:10:24.08:0,24,726	0/0:15,0:15:30.10:0,30,626	0/0:14,0:14:24.08:0,24,544	1/1:1,6:7:9.03:250,9,0	0/0:11,0:11:21.07:0,21,561	0/0:9,0:9:21.07:0,21,480	0/0:2,0:2:3.01:0,3,83	0/0:15,0:15:15.05:0,15,481	0/0:16,0:16:27.05:0,27,613	0/0:9,0:9:9.03:0,9,263	0/0:10,0:10:24.08:0,24,1025	0/0:11,0:11:30.08:0,30,1044	0/0:3,0:3:9.03:0,9,398	./.	1/1:12,3:14:5.89:171,6,0	1/1:5,2:7:3.01:85,3,0	0/0:19,0:19:45.15:0,45,959	0/0:16,0:16:42.14:0,42,1623	0/0:16,0:16:42.14:0,42,1680	0/0:15,0:15:39.13:0,39,1037
chr10	33931049	.	AATAAT	A	214.61	PASS	AB=0.925;AC=7;AF=0.130;AN=54;BaseQRankSum=3.738;DP=331;FS=0.899;HRun=0;HaplotypeScore=83.2499;InbreedingCoeff=0.0564;MQ=51.73;MQ0=7;MQRankSum=-0.966;QD=3.70;ReadPosRankSum=-3.029;VQSLOD=1.2081;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:24.08:0,24,445	0/0:5,0:5:11.40:0,11,172	0/0:8,0:2:6.02:0,6,190	./.	0/0:18,0:18:52.40:0,52,1334	0/0:7,0:7:21.07:0,21,663	0/0:4,0:4:12.04:0,12,275	0/0:31,0:31:91.16:0,91,2303	0/0:8,0:8:24.08:0,24,596	0/1:18,0:18:62.13:62,0,289	0/0:13,0:14:17.52:0,18,343	0/1:10,0:10:92.92:103,0,93	0/1:10,0:10:22.11:22,0,280	0/0:8,0:8:0.78:0,1,228	0/0:1,0:1:3.01:0,3,60	0/0:14,0:14:15.05:0,15,294	0/0:19,0:19:33.47:0,33,573	0/0:8,0:8:9.03:0,9,166	0/0:13,0:13:36.12:0,36,995	0/0:12,0:12:30.10:0,30,799	0/0:8,0:8:24.08:0,24,474	1/1:3,0:3:5.99:48,6,0	0/1:4,6:9:27.95:51,0,28	0/1:5,0:7:54.87:55,0,65	0/0:16,0:16:25.42:0,25,485	0/0:23,0:23:69.22:0,69,1660	0/0:17,0:17:51.17:0,51,1422	0/0:14,0:14:41.71:0,42,588
chr10	33931055	.	A	AC	3630.29	PASS	AB=0.936;AC=23;AF=0.426;AN=54;BaseQRankSum=-4.077;DP=358;FS=9.460;HRun=0;HaplotypeScore=62.3447;InbreedingCoeff=0.7537;MQ=52.01;MQ0=7;MQRankSum=0.635;QD=19.84;ReadPosRankSum=2.048;VQSLOD=4.9848;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:22.31:0,22,268	1/1:0,0:7:10.98:78,11,0	0/0:9,0:2:6.02:0,6,84	./.	0/0:16,0:19:52.34:0,52,652	0/0:8,0:8:24.08:0,24,328	0/0:3,0:3:7.27:0,7,87	0/1:36,4:40:2.69:3,0,785	0/0:6,0:8:23.99:0,24,275	1/1:0,0:20:56.36:763,56,0	1/1:0,3:14:15.04:183,15,0	0/1:11,0:11:0.33:0,0,168	1/1:0,11:11:30.10:470,30,0	1/1:1,8:9:24.08:372,24,0	0/0:4,0:4:10.58:0,11,112	1/1:0,0:14:12.02:120,12,0	0/0:8,1:19:20.06:0,20,173	1/1:0,0:10:6.01:60,6,0	0/0:13,0:13:33.09:0,33,440	0/0:10,0:10:30.09:0,30,401	0/0:9,0:9:27.09:0,27,369	1/1:1,3:4:9.03:144,9,0	0/0:10,0:9:8.61:0,9,67	0/1:8,1:9:18.75:19,0,67	1/1:1,17:18:51.15:763,51,0	0/0:24,0:24:72.23:0,72,976	0/0:16,0:16:48.16:0,48,664	1/1:0,16:16:42.14:656,42,0
chr10	33931058	.	ACATAC	A	938.46	PASS	AB=0.938;AC=8;AF=0.148;AN=54;BaseQRankSum=3.620;DP=359;FS=9.025;HRun=0;HaplotypeScore=91.9085;InbreedingCoeff=0.3141;MQ=51.81;MQ0=8;MQRankSum=-6.568;QD=12.68;ReadPosRankSum=0.825;VQSLOD=2.1533;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,13:16:21.91:441,22,0	0/0:7,0:7:11.14:0,11,211	0/0:8,0:2:6.02:0,6,82	./.	0/1:16,0:19:99:240,0,437	0/1:7,0:8:44.56:45,0,238	0/0:3,0:3:5.15:0,5,80	0/0:41,0:40:99:0,99,1818	0/1:8,0:8:45.87:46,0,159	0/0:18,0:18:50.60:0,51,1089	0/0:14,0:14:15.73:0,16,550	0/0:11,0:11:21.04:0,21,472	0/0:11,0:11:30:0,30,730	0/0:8,0:8:24.01:0,24,543	1/1:0,0:4:12.04:250,12,0	0/0:12,0:12:12.04:0,12,361	0/1:19,0:19:59.44:59,0,69	0/0:9,0:9:6.02:0,6,190	0/0:15,0:14:33.10:0,33,807	0/0:11,0:11:33.11:0,33,919	0/0:10,0:11:33.11:0,33,980	0/0:4,0:4:9.03:0,9,279	0/0:10,0:9:9.03:0,9,164	0/0:10,0:10:11.68:0,12,267	0/0:19,0:19:53.93:0,54,1067	0/0:25,0:25:75.26:0,75,1978	0/0:15,0:15:45.15:0,45,1009	0/0:16,0:16:42.01:0,42,967
chr10	33931284	.	CA	C	11192.77	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-4.677;DP=486;FS=21.038;HRun=8;HaplotypeScore=52.2680;InbreedingCoeff=0.9922;MQ=80.26;MQ0=0;MQRankSum=-6.889;QD=25.44;ReadPosRankSum=5.924;VQSLOD=3.2101;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,17:23:51.04:483,51,0	1/1:0,10:10:30.05:290,30,0	0/0:29,0:27:52.23:0,52,590	0/0:17,0:15:35.76:0,36,379	1/1:2,16:18:48.08:464,48,0	1/1:0,19:19:54.09:521,54,0	1/1:2,10:12:30.04:290,30,0	1/1:5,19:24:45.76:510,46,0	1/1:0,16:16:48.08:463,48,0	1/1:0,26:26:78.13:753,78,0	1/1:1,15:16:42.06:406,42,0	1/1:1,13:14:36.06:348,36,0	1/1:0,14:14:39.06:377,39,0	1/1:0,9:9:18.03:174,18,0	1/1:0,10:10:21.03:203,21,0	1/1:1,16:17:48.08:464,48,0	1/1:1,19:20:54.09:521,54,0	1/1:3,10:13:32.97:307,33,0	1/1:1,14:15:42.07:406,42,0	1/1:3,14:17:42.06:406,42,0	1/1:1,13:14:39.06:377,39,0	1/1:0,13:13:36.05:346,36,0	1/1:1,22:23:62.97:594,63,0	1/1:2,9:11:27.04:261,27,0	1/1:3,19:22:51.08:493,51,0	1/1:3,22:25:63.09:608,63,0	1/1:0,24:24:72.12:695,72,0	1/1:0,15:15:45.07:435,45,0
chr10	33932259	.	TC	T	1379.67	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=6.640;DP=691;FS=3.228;HRun=1;HaplotypeScore=54.9069;InbreedingCoeff=0.9740;MQ=44.00;MQ0=116;MQRankSum=1.599;QD=27.59;ReadPosRankSum=1.482;VQSLOD=3.5444;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:34:78.14:0,78,1172	0/0:10,0:10:27.02:0,27,378	0/0:22,0:10:27.08:0,27,399	0/0:27,0:8:21:0,21,265	0/0:27,0:25:57.16:0,57,850	0/0:20,0:19:42.13:0,42,643	0/0:27,0:26:66.05:0,66,953	0/0:77,0:18:54.14:0,54,832	0/0:18,0:17:51.05:0,51,732	0/0:25,0:24:71.91:0,72,1111	0/0:15,0:14:26.98:0,27,397	1/1:1,8:8:18.06:252,18,0	0/0:14,0:13:36.09:0,36,526	0/0:22,0:19:48.15:0,48,739	0/0:20,0:15:42.13:0,42,646	0/0:27,0:23:60.18:0,60,911	0/0:32,0:31:48.10:0,48,735	0/0:21,0:20:39.09:0,39,583	0/0:54,0:13:39.12:0,39,601	0/0:19,0:16:36.05:0,36,542	0/0:21,0:19:48.07:0,48,655	0/0:18,0:18:48.06:0,48,711	1/1:0,26:25:54.09:725,54,0	1/1:1,14:14:39.13:544,39,0	0/0:27,0:26:60.19:0,60,930	0/0:31,0:26:75.23:0,75,1173	0/0:24,0:23:63.15:0,63,952	0/0:6,0:3:9.03:0,9,144
chr10	33935903	.	CAG	C	3169.35	PASS	AB=0.820;AC=31;AF=0.554;AN=56;BaseQRankSum=-2.098;DP=473;FS=7.123;HRun=0;HaplotypeScore=114.5448;InbreedingCoeff=0.2550;MQ=63.31;MQ0=8;MQRankSum=0.573;QD=9.97;ReadPosRankSum=4.369;VQSLOD=2.8783;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:26:11.77:77,12,0	1/1:8,0:8:2.88:15,3,0	0/0:19,0:15:18.04:0,18,263	0/0:26,0:19:30.10:0,30,466	0/0:23,0:22:2.03:0,2,6	0/1:14,10:22:11.27:320,0,11	0/1:11,0:9:0:0,0,0	1/1:9,11:20:14.71:366,15,0	1/1:24,0:23:8.99:90,9,0	0/1:19,1:20:21.16:460,0,21	1/1:23,1:24:3.01:50,3,0	0/0:8,0:8:15.05:0,15,244	1/1:12,2:14:6.02:75,6,0	0/0:11,0:11:3:0,3,29	1/1:7,2:7:4.91:176,5,0	1/1:11,1:11:8.94:92,9,0	0/1:8,5:12:27.53:66,0,28	0/1:2,4:6:19.13:100,0,19	0/1:22,1:23:48.82:556,0,49	1/1:20,0:20:2.08:77,2,0	0/0:20,1:20:0:0,0,0	0/0:17,0:17:1.55:0,2,4	0/0:21,0:21:24.08:0,24,387	0/0:8,1:9:11.25:0,11,154	1/1:14,0:14:2.80:14,3,0	1/1:24,1:24:44.09:737,44,0	1/1:16,3:18:1.14:35,1,0	0/1:3,1:4:26.01:30,0,26
chr10	33935911	.	GAGAGAGAC	G	2074.09	PASS	AB=0.997;AC=16;AF=0.286;AN=56;BaseQRankSum=-7.124;DP=499;FS=1.339;HRun=0;HaplotypeScore=140.1765;InbreedingCoeff=-0.0844;MQ=52.63;MQ0=12;MQRankSum=3.295;QD=7.46;ReadPosRankSum=3.156;VQSLOD=2.6387;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:3,27:27:12.04:308,12,0	0/0:7,0:7:5.05:0,5,65	0/0:17,0:11:18.52:0,19,265	0/0:25,0:14:30.10:0,30,464	0/0:25,0:24:1.76:0,2,5	0/1:26,0:24:99:132,0,432	0/1:13,0:11:0:0,0,0	0/1:24,0:22:99:267,0,394	0/0:25,0:24:8.86:0,9,88	0/1:19,0:19:99:302,0,188	1/1:24,0:24:3.01:37,3,0	0/0:10,0:10:15.05:0,15,399	0/0:16,0:16:2.36:0,2,34	0/0:11,0:11:3.01:0,3,54	0/1:10,0:8:96.20:177,0,96	0/1:14,0:13:9.82:23,0,10	0/1:13,0:12:40:40,0,174	0/1:10,0:10:54.79:55,0,256	0/1:20,0:20:99:260,0,386	0/1:24,0:24:51.28:62,0,51	0/1:24,0:23:0:0,0,0	0/0:19,0:19:5.04:0,5,33	0/0:20,0:20:24.55:0,25,411	0/0:8,0:8:11.40:0,11,254	0/0:14,0:14:2.82:0,3,64	0/1:26,0:25:99:556,0,239	0/0:20,0:19:11.93:0,12,181	0/0:4,0:4:3.48:0,3,135
chr10	33935913	.	G	GAGACAGAGACAGAGAC	8939.12	PASS	AB=0.510;AC=39;AF=0.722;AN=54;BaseQRankSum=-2.255;DP=535;FS=0.000;HRun=0;HaplotypeScore=167.4345;InbreedingCoeff=0.6910;MQ=52.17;MQ0=14;MQRankSum=-1.002;QD=23.22;ReadPosRankSum=0.117;VQSLOD=3.8502;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:27:11.93:0,12,169	1/1:0,0:7:3.01:104,3,0	0/0:18,0:10:18.52:0,19,264	0/0:27,0:14:30.10:0,30,466	0/1:1,0:24:0:0,0,0	1/1:19,0:26:48.11:888,48,0	./.	1/1:29,0:25:51.61:778,52,0	1/1:1,0:24:9.03:450,9,0	1/1:2,0:20:48.12:928,48,0	1/1:2,0:25:3.01:37,3,0	0/0:10,0:10:5.20:0,5,167	1/1:2,0:16:6.49:404,6,0	1/1:1,9:13:3.01:165,3,0	1/1:7,0:8:24.06:339,24,0	1/1:1,0:15:8.82:271,9,0	1/1:15,0:14:18.03:246,18,0	1/1:10,0:10:24:369,24,0	1/1:4,0:27:72.83:1428,73,0	1/1:1,0:27:8.96:89,9,0	0/0:5,0:24:0.34:0,0,1	1/1:1,0:20:2.97:20,3,0	0/0:20,0:20:23.64:0,24,385	0/0:8,0:8:9.02:0,9,126	1/1:1,0:14:3.01:103,3,0	1/1:2,21:29:68.05:1357,68,0	1/1:3,0:21:12.04:544,12,0	1/1:4,0:4:9.01:420,9,0
chr10	33935947	.	G	GAC	208.33	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=6.300;DP=547;FS=35.016;HRun=0;HaplotypeScore=124.9632;InbreedingCoeff=0.0130;MQ=51.05;MQ0=18;MQRankSum=-4.260;QD=0.93;ReadPosRankSum=-1.448;VQSLOD=0.4782;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:29:33.09:0,33,460	0/1:6,0:6:10.66:26,0,11	0/0:51,0:17:18.83:0,19,346	0/0:70,0:23:31.24:0,31,268	0/0:22,0:21:27:0,27,348	0/1:34,0:32:52.76:53,0,575	0/0:17,0:15:21.07:0,21,321	0/1:32,0:28:53.05:53,0,219	0/1:21,0:20:17.61:18,0,226	0/1:10,0:10:12.85:13,0,77	0/0:14,0:13:17.46:0,17,96	1/1:6,0:7:8.32:68,8,0	0/1:15,0:15:2.46:2,0,76	0/0:7,0:7:5.91:0,6,40	0/0:15,0:12:11.90:0,12,293	0/0:16,0:15:3.33:0,3,53	0/0:13,0:13:22.89:0,23,318	0/1:9,0:9:0.45:0,0,83	0/1:28,0:25:33.81:34,0,262	0/0:22,0:21:26.55:0,27,175	0/0:20,0:20:20.34:0,20,118	0/0:14,0:14:20.46:0,20,119	1/1:2,2:5:1.51:5,2,0	1/1:5,4:9:3.15:37,3,0	0/1:19,0:19:5.46:5,0,116	0/1:11,0:11:2.42:2,0,68	0/1:17,0:16:13.64:39,0,14	0/0:9,0:9:8.50:0,9,155
chr10	33936210	.	GA	G	1432.84	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=7.455;DP=579;FS=6.023;HRun=1;HaplotypeScore=59.6842;InbreedingCoeff=0.9996;MQ=80.48;MQ0=0;MQRankSum=-0.974;QD=35.82;ReadPosRankSum=0.047;VQSLOD=3.5439;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,102,1544	0/0:19,0:19:54.18:0,54,827	0/0:26,0:26:34.65:0,35,930	0/0:16,0:16:37.63:0,38,551	0/0:24,0:23:63.21:0,63,978	0/0:29,0:29:87.26:0,87,1293	0/0:15,0:15:45.14:0,45,673	0/0:33,0:33:99:0,99,1445	0/0:25,0:25:75.26:0,75,1171	0/0:19,0:18:54.18:0,54,844	0/0:29,0:28:75.25:0,75,1148	1/1:1,15:16:48.16:666,48,0	0/0:20,0:20:60.20:0,60,932	0/0:22,0:22:66.19:0,66,985	0/0:16,0:16:48.07:0,48,676	0/0:21,0:21:63.18:0,63,921	0/0:22,0:22:66.20:0,66,999	0/0:12,0:12:36.12:0,36,551	0/0:19,0:19:56.51:0,57,757	0/0:33,0:32:93.30:0,93,1421	0/0:12,0:12:36.10:0,36,539	0/0:18,0:18:54.18:0,54,842	1/1:0,14:14:38.99:505,39,0	1/1:0,10:10:30.10:405,30,0	0/0:22,0:22:63.21:0,63,971	0/0:16,0:16:45.14:0,45,681	0/0:24,0:24:69.23:0,69,1076	0/0:13,0:13:39.13:0,39,609
chr10	33936277	.	A	AT	1470.87	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-4.798;DP=569;FS=1.326;HRun=3;HaplotypeScore=56.8528;InbreedingCoeff=0.9946;MQ=74.17;MQ0=0;MQRankSum=-0.785;QD=30.64;ReadPosRankSum=0.967;VQSLOD=3.4225;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:93.27:0,93,1104	0/0:10,0:10:30.08:0,30,348	0/0:14,0:14:30.07:0,30,341	0/0:9,0:9:21.05:0,21,235	0/0:34,0:33:81.17:0,81,921	0/0:30,0:30:87.23:0,87,1019	0/0:13,0:13:36.08:0,36,408	0/0:30,0:30:75.20:0,75,868	0/0:21,0:21:63.18:0,63,743	0/0:27,0:27:72.21:0,72,850	0/0:26,0:25:66.20:0,66,791	1/1:1,12:13:33.07:440,33,0	0/0:18,0:18:54.16:0,54,637	0/0:25,0:25:72.20:0,72,842	0/0:12,0:12:36.11:0,36,432	0/0:25,0:23:72.20:0,72,843	0/0:27,0:27:78.21:0,78,921	0/0:7,0:7:18.06:0,18,216	0/0:16,0:16:48.15:0,48,575	0/0:28,0:26:66.14:0,66,772	0/0:10,0:10:30.09:0,30,360	0/0:23,0:23:63.14:0,63,717	1/1:3,17:20:45.15:629,45,0	1/1:1,14:15:39.13:545,39,0	0/0:21,0:21:57.17:0,57,675	0/0:24,0:24:69.20:0,69,817	0/0:29,0:27:75.23:0,75,899	0/0:9,0:9:27.08:0,27,324
chr10	33936533	.	TTGGA	T	7151.56	PASS	AB=1.000;AC=33;AF=0.589;AN=56;BaseQRankSum=1.364;DP=641;FS=2.803;HRun=0;HaplotypeScore=133.4888;InbreedingCoeff=-0.3635;MQ=50.71;MQ0=58;MQRankSum=1.720;QD=12.48;ReadPosRankSum=3.665;VQSLOD=4.5141;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:32,0:29:12.51:428,13,0	0/1:10,0:8:33.06:94,0,33	0/0:36,0:12:22.71:0,23,229	0/0:32,0:7:20.93:0,21,180	0/1:22,0:21:81.65:285,0,82	0/1:23,0:22:89.80:276,0,90	1/1:24,0:17:41.75:341,42,0	1/1:13,15:17:9.94:340,10,0	0/1:22,0:21:83.03:287,0,83	0/1:32,0:29:81.40:546,0,81	0/1:24,0:21:99:201,0,180	1/1:21,0:21:59.27:447,59,0	0/1:16,0:15:99:185,0,131	0/1:23,0:23:16.58:240,0,17	0/1:20,0:20:99:188,0,119	0/1:25,0:24:99:234,0,252	0/1:26,0:26:99:274,0,204	0/1:13,0:12:45.50:45,0,47	1/1:6,15:17:14.50:348,15,0	0/1:22,0:20:91.96:259,0,92	0/1:32,0:30:77.33:369,0,77	0/1:19,0:19:73.37:237,0,73	0/1:13,0:13:0:0,0,0	1/1:18,0:18:43.91:286,44,0	1/1:28,0:27:47.85:558,48,0	0/1:29,0:27:99:382,0,188	0/1:24,0:22:99:257,0,250	0/1:6,0:6:44.03:44,0,49
chr10	33936544	.	GTTGA	G	66.97	PASS	AB=0.950;AC=7;AF=0.125;AN=56;BaseQRankSum=-3.128;DP=658;FS=2.131;HRun=0;HaplotypeScore=164.1181;InbreedingCoeff=-0.1481;MQ=54.91;MQ0=48;MQRankSum=-1.918;QD=0.54;ReadPosRankSum=-6.104;VQSLOD=0.9355;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:27:46.07:0,46,476	0/0:11,0:9:5.89:0,6,228	0/0:42,0:18:46.43:0,46,943	0/0:44,0:19:47.32:0,47,1021	0/0:23,0:22:61.29:0,61,579	0/0:23,0:22:48.42:0,48,710	0/0:25,0:18:40.81:0,41,307	0/0:26,0:18:38.87:0,39,454	0/0:22,0:22:48.88:0,49,684	0/0:34,0:33:60.57:0,61,739	0/1:23,2:22:7.99:8,0,394	0/0:24,0:24:64.99:0,65,547	0/1:16,0:15:33.80:34,0,259	0/1:16,7:23:4.50:4,0,296	0/1:21,0:21:24.43:24,0,292	0/0:22,1:22:13:0,13,378	0/0:27,0:27:69.59:0,70,1007	0/1:12,0:12:49.24:49,0,84	0/0:19,0:19:50.96:0,51,456	0/1:22,1:22:56.60:57,0,528	0/0:28,0:27:2.67:0,3,367	0/0:19,2:21:23.84:0,24,392	0/0:16,0:16:11.68:0,12,116	0/0:19,0:19:44.30:0,44,324	0/0:24,0:23:40.23:0,40,475	0/0:29,0:27:42.94:0,43,659	0/0:22,2:22:51.44:0,51,540	0/1:4,0:4:13.14:13,0,43
chr10	33940907	.	TTAAACCTGATGCA	T	1986.77	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=7.190;DP=587;FS=0.913;HRun=0;HaplotypeScore=212.7769;InbreedingCoeff=0.9784;MQ=83.18;MQ0=0;MQRankSum=-7.186;QD=73.58;ReadPosRankSum=2.117;VQSLOD=3.2215;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:93.32:0,93,5836	0/0:7,0:7:21.07:0,21,1386	0/0:14,0:14:36.12:0,36,1902	0/0:20,0:20:48.16:0,48,2259	0/0:26,0:26:78.27:0,78,5016	0/0:27,0:27:78.27:0,78,5021	0/0:20,0:20:60.21:0,60,3756	0/0:35,0:35:96.33:0,96,5818	0/0:27,0:27:81.28:0,81,4941	0/0:19,0:19:57.20:0,57,3525	0/0:30,0:30:87.30:0,87,5399	1/1:1,9:10:27.09:1078,27,0	0/0:22,0:22:66.23:0,66,4238	0/0:29,0:29:84.28:0,84,5189	0/0:22,0:22:66.23:0,66,4108	0/0:18,0:18:54.19:0,54,3355	0/0:24,0:24:69.24:0,69,4372	0/0:13,0:13:36.09:0,36,2090	0/0:21,0:21:57.20:0,57,3364	0/0:23,0:23:66.23:0,66,4075	0/0:33,0:33:96.33:0,96,6092	0/0:18,0:18:51.18:0,51,3079	1/1:5,5:10:15.05:599,15,0	1/1:1,6:7:12.04:446,12,0	0/0:17,0:17:50.38:0,50,2810	0/0:21,0:21:60.21:0,60,3947	0/0:35,0:35:99:0,105,5912	0/0:7,0:6:18.06:0,18,1188
chr10	33940985	.	TTATGTATAGCTTGATTTC	T	4124.75	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.736;DP=603;FS=0.000;HRun=0;HaplotypeScore=281.8479;InbreedingCoeff=0.9603;MQ=89.29;MQ0=0;MQRankSum=-8.740;QD=108.55;ReadPosRankSum=3.361;VQSLOD=2.8455;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:72.24:0,72,5220	0/0:11,0:11:33.10:0,33,2437	0/0:23,0:23:69.24:0,69,3963	0/0:27,0:27:73.45:0,73,4148	0/0:27,0:27:81.26:0,81,6231	0/0:33,0:33:96.33:0,96,7505	0/0:21,0:21:63.22:0,63,5040	0/0:34,0:34:99:0,99,6781	0/0:30,0:30:90.30:0,90,7055	0/0:31,0:31:87.27:0,87,5915	0/0:27,0:27:81.26:0,81,5739	1/1:2,11:13:27.09:1418,27,0	0/0:18,0:18:54.19:0,54,4213	0/0:25,0:25:72.25:0,72,6072	0/0:23,0:23:69.24:0,69,5485	0/0:16,0:16:48.16:0,48,3598	0/0:20,0:20:60.21:0,60,4675	0/0:14,0:14:39.13:0,39,3331	0/0:19,0:19:57.19:0,57,3864	0/0:25,0:25:69.24:0,69,5510	0/0:15,0:15:45.14:0,45,3338	0/0:18,0:18:54.19:0,54,4551	1/1:2,16:18:48.16:2391,48,0	1/1:4,3:7:6.02:315,6,0	0/0:17,0:17:51.16:0,51,3920	0/0:19,0:19:57.17:0,57,4176	0/0:38,0:38:99:0,114,9039	0/0:8,0:8:24.08:0,24,1767
chr10	33941873	.	GCACA	G	1771.66	PASS	AB=0.847;AC=39;AF=0.780;AN=50;BaseQRankSum=3.381;DP=522;FS=5.277;HRun=0;HaplotypeScore=98.8208;InbreedingCoeff=0.3576;MQ=51.28;MQ0=19;MQRankSum=-0.815;QD=4.53;ReadPosRankSum=0.180;VQSLOD=1.7458;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:32:9.01:84,9,0	1/1:6,0:8:3:28,3,0	./.	./.	1/1:16,0:27:6.01:56,6,0	1/1:14,0:20:2.99:25,3,0	1/1:15,0:18:3:28,3,0	./.	1/1:12,0:24:12.02:124,12,0	1/1:18,1:20:6.39:78,6,0	1/1:15,0:15:0.47:1,0,0	0/0:5,0:5:9.01:0,9,157	1/1:6,2:8:2.82:46,3,0	0/1:12,4:16:20.58:161,0,21	1/1:11,8:21:27.07:360,27,0	1/1:7,5:13:15.04:213,15,0	1/1:18,0:23:3:28,3,0	1/1:9,2:12:6.01:74,6,0	0/0:15,0:14:13.44:0,13,78	1/1:13,3:15:6.02:92,6,0	0/1:28,0:28:37.05:37,0,69	0/1:13,7:19:2.95:127,0,3	0/0:9,0:10:12.02:0,12,207	0/0:8,2:11:11.78:0,12,191	1/1:15,0:16:9.02:120,9,0	1/1:13,4:17:8.76:101,9,0	1/1:19,7:26:6.02:92,6,0	1/1:6,1:6:3.01:46,3,0
chr10	33942046	.	TG	T	1117.79	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.213;DP=552;FS=0.000;HRun=3;HaplotypeScore=65.3546;InbreedingCoeff=0.9959;MQ=84.52;MQ0=0;MQRankSum=0.530;QD=26.61;ReadPosRankSum=-0.267;VQSLOD=2.6399;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,102,1444	0/0:14,0:14:39.12:0,39,534	0/0:26,0:26:55.97:0,56,783	0/0:18,0:18:41.33:0,41,547	0/0:28,0:28:84.27:0,84,1192	0/0:29,0:29:84.28:0,84,1208	0/0:18,0:18:54.15:0,54,738	0/0:14,0:14:39.12:0,39,525	0/0:14,0:14:42.14:0,42,599	0/0:24,0:24:69.22:0,69,970	0/0:31,0:31:93.31:0,93,1322	1/1:0,12:12:27.08:335,27,0	0/0:9,0:9:27.09:0,27,389	0/0:16,0:16:48.16:0,48,682	0/0:24,0:24:69.23:0,69,990	0/0:15,0:15:45.15:0,45,648	0/0:22,0:22:63.18:0,63,886	0/0:22,0:22:66.22:0,66,949	0/0:13,0:13:36.12:0,36,515	0/0:18,0:18:54.18:0,54,774	0/0:20,0:20:57.19:0,57,816	0/0:19,0:19:57.19:0,57,820	1/1:1,12:13:27.08:331,27,0	1/1:1,16:17:48.15:595,48,0	0/0:17,0:17:51.16:0,51,717	0/0:31,0:31:81.27:0,81,1162	0/0:26,0:26:75.25:0,75,1074	0/0:6,0:6:18.04:0,18,240
chr10	33942151	.	G	GAA	1277.87	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-2.760;DP=514;FS=0.721;HRun=6;HaplotypeScore=102.8282;InbreedingCoeff=0.9971;MQ=79.65;MQ0=0;MQRankSum=-3.267;QD=27.78;ReadPosRankSum=2.391;VQSLOD=2.9718;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:66.19:0,66,801	0/0:12,0:12:33.10:0,33,402	0/0:35,0:27:66.67:0,67,729	0/0:18,0:16:29.77:0,30,315	0/0:25,0:24:55.13:0,55,704	0/0:18,0:18:48.60:0,49,566	0/0:15,0:15:42.11:0,42,500	0/0:19,0:19:44.94:0,45,490	0/0:16,0:16:45.10:0,45,533	0/0:26,0:26:66.20:0,66,805	0/0:11,0:11:27.06:0,27,307	1/1:2,11:13:21.07:355,21,0	0/0:13,0:13:36.11:0,36,433	0/0:13,0:13:39.12:0,39,475	0/0:26,0:26:72.22:0,72,876	0/0:21,0:21:54.16:0,54,657	0/0:17,0:17:45.13:0,45,537	0/0:14,0:14:33.06:0,33,388	0/0:13,0:13:30.05:0,30,349	0/0:18,0:18:44.54:0,45,522	0/0:26,0:26:72.21:0,72,871	0/0:18,0:18:36.85:0,37,484	1/1:1,16:17:30.10:507,30,0	1/1:1,15:16:33.11:558,33,0	0/0:15,0:15:41.69:0,42,459	0/0:21,0:21:48.13:0,48,583	0/0:19,0:18:48.09:0,48,555	0/0:12,0:12:36.11:0,36,438
chr10	33943030	.	T	TA	2195.82	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=11.688;DP=751;FS=11.591;HRun=2;HaplotypeScore=79.6094;InbreedingCoeff=0.9977;MQ=59.59;MQ0=2;MQRankSum=0.817;QD=30.93;ReadPosRankSum=-1.539;VQSLOD=1.8043;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,117,1406	0/0:14,0:14:39.12:0,39,482	0/0:28,0:16:45.11:0,45,541	0/0:30,0:20:45.14:0,45,557	0/0:26,0:26:78.21:0,78,940	0/0:20,0:20:57.18:0,57,706	0/0:29,0:30:67.29:0,67,1044	0/0:18,0:18:48.15:0,48,595	0/0:16,0:16:45.13:0,45,544	0/0:37,0:37:99:0,102,1232	0/0:14,0:14:36.11:0,36,446	1/1:1,26:27:66.22:950,66,0	0/0:32,0:32:93.29:0,93,1152	0/0:27,0:27:75.21:0,75,902	0/0:29,0:29:84.23:0,84,1015	0/0:25,0:25:72.21:0,72,880	0/0:48,0:48:99:0,141,1704	0/0:25,0:25:75.24:0,75,929	0/0:27,0:27:75.19:0,75,892	0/0:22,0:22:66.21:0,66,818	0/0:43,0:43:99:0,123,1525	0/0:22,0:22:57.16:0,57,693	1/1:0,18:18:45.15:647,45,0	1/1:3,23:24:21.09:741,21,0	0/0:22,0:22:57.16:0,57,682	0/0:45,0:45:99:0,132,1621	0/0:29,0:29:81.25:0,81,1004	0/0:8,0:8:24.08:0,24,298
chr10	33943922	.	G	GT	2055.40	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-7.625;DP=681;FS=9.610;HRun=7;HaplotypeScore=69.1733;InbreedingCoeff=0.9938;MQ=79.67;MQ0=0;MQRankSum=-4.464;QD=28.55;ReadPosRankSum=-0.244;VQSLOD=3.8200;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:62,0:62:99:0,174,1647	0/0:10,0:10:30.05:0,30,289	0/0:22,0:22:53.78:0,54,490	0/0:25,0:26:41.26:0,41,430	0/0:26,0:26:72.11:0,72,695	0/0:15,0:15:36.06:0,36,347	0/0:35,0:35:99:0,102,974	0/0:22,0:22:51.06:0,51,485	0/0:22,0:22:60.10:0,60,579	0/0:26,0:26:72.08:0,72,684	0/0:15,0:15:42.06:0,42,405	1/1:1,26:27:81.22:963,81,0	0/0:34,0:34:96.12:0,96,914	0/0:29,0:29:78.12:0,78,753	0/0:20,0:20:54.08:0,54,521	0/0:17,0:17:36.05:0,36,348	0/0:36,0:36:87.12:0,87,840	0/0:15,0:15:42.07:0,42,406	0/0:24,0:24:66.10:0,66,636	0/0:15,0:15:45.06:0,45,429	0/0:40,0:40:99:0,102,973	0/0:24,0:24:60.09:0,60,579	1/1:2,20:22:52.40:619,52,0	1/1:5,18:23:51.16:616,51,0	0/0:11,0:11:30:0,30,276	0/0:30,0:30:81.12:0,81,777	0/0:27,0:27:66.05:0,66,627	0/0:6,0:6:15:0,15,134
chr10	33944136	.	CA	C	2532.07	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=11.857;DP=631;FS=1.001;HRun=2;HaplotypeScore=88.7859;InbreedingCoeff=0.9133;MQ=69.00;MQ0=0;MQRankSum=-0.708;QD=35.17;ReadPosRankSum=1.934;VQSLOD=4.0710;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,111,1726	0/0:8,0:8:24.08:0,24,384	0/0:9,0:9:24.07:0,24,348	0/0:5,0:5:2.25:0,2,159	0/0:16,0:16:48.15:0,48,744	0/0:9,0:9:27.09:0,27,417	0/0:45,0:45:99:0,135,2113	0/0:11,0:11:33.10:0,33,487	0/0:23,0:23:69.24:0,69,1092	0/0:26,0:26:69.24:0,69,1102	0/0:11,0:11:33.11:0,33,526	1/1:0,26:26:69.23:960,69,0	0/0:18,0:18:54.17:0,54,840	0/0:39,0:39:99:0,114,1726	0/0:18,0:18:54.18:0,54,863	0/0:17,0:17:51.17:0,51,814	0/0:37,0:37:99:0,111,1746	0/0:21,0:21:63.21:0,63,1007	0/0:19,0:19:57.19:0,57,909	0/0:20,0:20:57.19:0,57,907	0/0:91,0:91:99:0,271,4254	0/0:13,0:13:39.12:0,39,597	1/1:0,10:10:27.09:375,27,0	1/1:0,36:36:96.32:1339,96,0	0/0:23,0:23:69.24:0,69,1100	0/0:23,0:23:66.18:0,66,1008	0/0:17,0:17:48.16:0,48,766	0/0:3,0:3:9.03:0,9,144
chr10	33944475	.	GTA	G	23069.52	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-9.192;DP=724;FS=10.911;HRun=0;HaplotypeScore=108.3514;InbreedingCoeff=0.9990;MQ=83.27;MQ0=0;MQRankSum=-7.829;QD=39.44;ReadPosRankSum=3.987;VQSLOD=6.4550;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,64:64:99:2474,169,0	1/1:0,7:7:21.07:309,21,0	0/0:26,0:26:78.25:0,78,1333	0/0:34,0:33:90.31:0,90,1620	1/1:0,25:25:66.22:964,66,0	1/1:0,18:18:45.15:663,45,0	1/1:0,18:18:48.16:707,48,0	1/1:2,25:27:72.18:1015,72,0	1/1:0,24:24:66.22:972,66,0	1/1:1,15:16:42.12:597,42,0	1/1:1,21:22:57.19:839,57,0	0/0:15,0:15:45.15:0,45,843	1/1:0,12:12:33.11:486,33,0	1/1:0,27:27:78.26:1149,78,0	1/1:1,24:25:66.22:972,66,0	1/1:0,22:22:54.05:795,54,0	1/1:0,37:37:96.32:1414,96,0	1/1:0,23:23:60.20:877,60,0	1/1:1,26:26:75.25:1105,75,0	1/1:0,21:21:51.17:751,51,0	1/1:1,22:23:63.21:928,63,0	1/1:0,20:20:54.18:795,54,0	0/0:29,0:29:87.28:0,87,1598	0/0:35,0:35:99:0,105,1966	1/1:0,33:33:90.30:1326,90,0	1/1:1,28:29:84.28:1237,84,0	1/1:0,43:43:99:1811,123,0	1/1:1,21:22:60.20:884,60,0
chr10	33944618	.	GT	G	10869.13	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-10.846;DP=603;FS=2.398;HRun=10;HaplotypeScore=80.3354;InbreedingCoeff=0.9881;MQ=68.74;MQ0=2;MQRankSum=-1.946;QD=21.57;ReadPosRankSum=0.571;VQSLOD=5.6746;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,26:28:74.97:651,75,0	1/1:2,11:13:29.98:260,30,0	0/0:19,0:11:10.71:0,11,153	0/0:18,0:17:20.71:0,21,282	1/1:5,21:26:56.96:495,57,0	1/1:0,25:25:68.99:599,69,0	1/1:3,16:19:44.98:391,45,0	1/1:7,27:34:80.87:683,81,0	1/1:3,15:18:38.98:339,39,0	1/1:3,24:27:74.97:648,75,0	1/1:2,21:23:56.98:495,57,0	0/0:19,0:19:43.66:0,44,255	1/1:4,16:20:44.98:391,45,0	1/1:0,19:20:59.03:501,59,0	1/1:3,25:28:56.97:495,57,0	1/1:3,16:19:44.98:391,45,0	1/1:1,20:21:56.99:495,57,0	1/1:0,9:9:21:182,21,0	1/1:4,17:21:50.97:439,51,0	1/1:3,21:24:59.87:511,60,0	1/1:3,13:16:38.99:339,39,0	1/1:3,12:15:35.03:304,35,0	0/0:23,0:23:52.32:0,52,298	0/0:19,0:19:29.03:0,29,157	1/1:0,19:19:56.99:495,57,0	1/1:2,25:27:74.97:647,75,0	1/1:3,32:35:64.10:706,64,0	1/1:1,16:17:47.99:417,48,0
chr10	33944628	.	T	TA	1430.90	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.443;DP=611;FS=2.029;HRun=2;HaplotypeScore=115.6146;InbreedingCoeff=0.9963;MQ=71.51;MQ0=2;MQRankSum=-1.038;QD=24.25;ReadPosRankSum=1.916;VQSLOD=3.5227;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:73.07:0,73,418	0/0:12,0:12:32.24:0,32,194	0/0:19,0:11:26.34:0,26,249	0/0:18,0:17:22.38:0,22,361	0/0:26,0:26:70.39:0,70,429	0/0:30,0:30:76.20:0,76,457	0/0:17,0:17:46.86:0,47,276	0/0:35,0:36:97.12:0,97,644	0/0:17,0:17:41.02:0,41,245	0/0:27,0:27:79.16:0,79,478	0/0:22,0:22:58.52:0,59,345	1/1:4,14:18:32.13:474,32,0	0/0:18,0:18:46.87:0,47,279	0/0:24,0:24:70.43:0,70,434	0/0:29,0:29:61.41:0,61,372	0/0:22,0:23:61.86:0,62,408	0/0:23,0:23:61.56:0,62,368	0/0:11,0:11:20.45:0,20,117	0/0:19,0:19:55.73:0,56,335	0/0:24,0:24:61.49:0,61,361	0/0:14,0:14:38:0,38,218	0/0:14,0:14:35.14:0,35,209	1/1:0,27:27:54.09:699,54,0	1/1:1,13:14:30.10:401,30,0	0/0:21,0:21:61.51:0,62,368	0/0:29,0:29:82.16:0,82,508	0/0:34,0:33:84.64:0,85,481	0/0:19,0:19:49.79:0,50,295
chr10	33945123	.	A	AC	2230.73	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-1.528;DP=610;FS=5.740;HRun=4;HaplotypeScore=60.2446;InbreedingCoeff=0.9888;MQ=79.44;MQ0=0;MQRankSum=-1.832;QD=33.80;ReadPosRankSum=0.955;VQSLOD=4.2960;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:69.14:0,69,753	0/0:4,0:4:12.03:0,12,136	0/0:25,0:25:59.81:0,60,638	0/0:20,0:20:51.13:0,51,562	0/0:26,0:26:66.18:0,66,737	0/0:23,0:23:69.18:0,69,773	0/0:24,0:24:63.17:0,63,706	0/0:18,0:18:48.12:0,48,531	0/0:26,0:26:78.22:0,78,883	0/0:26,0:26:75.21:0,75,846	0/0:14,0:14:39.09:0,39,429	1/1:1,24:25:66.22:902,66,0	0/0:23,0:23:66.16:0,66,722	0/0:26,0:26:75.17:0,75,821	0/0:35,0:35:99:0,105,1180	0/0:28,0:28:81.21:0,81,900	0/0:25,0:25:75.13:0,75,822	0/0:15,0:15:45.11:0,45,499	0/0:20,0:20:57.16:0,57,646	0/0:10,0:10:30.08:0,30,331	0/0:23,0:23:66.19:0,66,748	0/0:15,0:15:39.03:0,39,423	1/1:0,15:15:42.14:569,42,0	1/1:2,24:26:66.22:902,66,0	0/0:17,0:17:45.11:0,45,500	0/0:23,0:23:63.17:0,63,707	0/0:41,0:41:99:0,111,1258	0/0:11,0:11:33.09:0,33,374
chr10	33945355	.	ATC	A	2624.46	PASS	AB=0.975;AC=25;AF=0.446;AN=56;BaseQRankSum=-2.670;DP=318;FS=2.249;HRun=0;HaplotypeScore=59.4580;InbreedingCoeff=0.3279;MQ=74.00;MQ0=5;MQRankSum=-1.188;QD=16.72;ReadPosRankSum=2.131;VQSLOD=3.5717;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:17.07:0,17,239	1/1:1,0:1:3.01:44,3,0	0/0:29,0:22:53.49:0,53,887	0/0:36,0:23:59.64:0,60,929	0/1:14,0:13:1.92:2,0,19	0/0:10,0:10:21:0,21,311	0/0:10,0:10:18.94:0,19,253	1/1:2,27:29:66.35:1011,66,0	0/0:12,0:11:18.06:0,18,290	0/1:10,0:10:13.63:166,0,14	1/1:8,0:6:5.52:88,6,0	0/1:4,0:4:0.05:0,0,0	0/0:5,0:5:2.86:0,3,24	1/1:4,0:4:2.40:81,2,0	0/0:11,0:11:18.50:0,19,249	0/1:5,0:5:3.86:119,0,4	0/0:7,0:7:14.98:0,15,205	0/1:4,0:4:14.56:69,0,15	0/1:9,1:9:38.49:195,0,38	1/1:3,10:13:2.22:7,2,0	1/1:17,0:16:21.04:255,21,0	0/0:13,0:13:6.38:0,6,49	0/0:9,0:9:2.24:0,2,24	0/0:10,0:10:2.80:0,3,25	1/1:10,0:10:0.47:1,0,0	0/1:10,1:11:20.98:232,0,21	1/1:10,0:10:7.22:280,7,0	1/1:7,0:7:0.36:238,0,0
chr10	33945448	.	CCT	C	699.23	PASS	AB=0.962;AC=12;AF=0.222;AN=54;BaseQRankSum=3.503;DP=313;FS=2.717;HRun=0;HaplotypeScore=58.5311;InbreedingCoeff=0.7724;MQ=48.26;MQ0=19;MQRankSum=-1.140;QD=13.71;ReadPosRankSum=-0.500;VQSLOD=3.1101;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:36.07:0,36,511	0/0:1,0:1:3.01:0,3,50	0/0:56,0:15:18:0,18,347	0/0:58,0:16:30.22:0,30,464	1/1:0,7:7:14.92:191,15,0	1/1:0,6:5:14.99:171,15,0	1/1:2,6:8:12.04:153,12,0	0/0:13,0:11:24.07:0,24,324	1/1:0,5:5:12.04:152,12,0	0/0:7,0:7:15.05:0,15,249	0/0:6,0:6:12.04:0,12,200	./.	0/0:8,0:8:20.66:0,21,299	0/0:9,0:9:23.67:0,24,398	0/0:8,0:7:18.06:0,18,300	0/0:6,0:7:20.74:0,21,302	1/1:1,7:7:15.05:191,15,0	0/0:5,0:5:15.05:0,15,241	0/0:9,0:7:15.02:0,15,231	0/0:7,0:7:18.06:0,18,294	0/0:12,1:10:27.02:0,27,396	0/0:12,0:11:24.08:0,24,399	0/1:5,0:5:0.15:0,0,0	0/0:9,0:9:12.22:0,12,278	0/1:11,1:12:5.08:5,0,464	0/0:12,0:11:33.08:0,33,491	0/0:5,0:4:12.04:0,12,200	0/0:3,0:3:6.49:0,6,101
chr10	33946790	.	C	CA	23006.34	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-2.030;DP=673;FS=4.026;HRun=4;HaplotypeScore=91.6407;InbreedingCoeff=0.9990;MQ=84.84;MQ0=0;MQRankSum=-10.068;QD=36.40;ReadPosRankSum=5.547;VQSLOD=4.3882;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,25:29:66.22:902,66,0	1/1:0,9:9:27.09:369,27,0	0/0:22,0:22:60.16:0,60,671	0/0:19,0:19:48.04:0,48,495	1/1:4,20:24:54.18:739,54,0	1/1:1,23:24:60.17:801,60,0	1/1:2,18:20:45.15:616,45,0	1/1:1,32:33:96.31:1297,96,0	1/1:0,19:20:54.18:736,54,0	1/1:5,33:38:99:1371,102,0	1/1:2,22:24:66.22:903,66,0	1/1:0,12:12:36.12:493,36,0	1/1:2,24:26:69.23:944,69,0	1/1:0,27:27:69.19:923,69,0	1/1:3,20:23:57.19:780,57,0	1/1:0,20:20:60.20:821,60,0	1/1:3,28:31:78.26:1067,78,0	1/1:0,25:25:72.24:985,72,0	1/1:3,11:15:36.11:470,36,0	1/1:0,33:33:96.32:1313,96,0	1/1:1,20:21:54.18:739,54,0	1/1:3,20:23:60.20:820,60,0	1/1:0,25:25:72.24:985,72,0	1/1:0,18:17:51.17:698,51,0	1/1:1,17:18:42.14:574,42,0	1/1:0,30:30:90.27:1200,90,0	1/1:2,51:53:99:2052,150,0	1/1:1,10:11:30.10:410,30,0
chr10	33947104	.	AG	A	797.89	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=1.590;DP=610;FS=9.968;HRun=3;HaplotypeScore=98.3280;InbreedingCoeff=0.9436;MQ=80.61;MQ0=0;MQRankSum=-0.895;QD=33.25;ReadPosRankSum=2.118;VQSLOD=3.3724;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:97.04:0,97,1361	0/0:4,0:4:9.03:0,9,130	0/0:32,1:30:71.40:0,71,958	0/0:24,0:22:48.97:0,49,630	0/0:27,0:27:81.26:0,81,1149	0/0:35,0:35:99:0,99,1408	0/0:18,0:18:51.17:0,51,734	0/0:37,0:37:99:0,102,1406	0/0:20,0:20:57.17:0,57,802	0/0:28,0:28:84.27:0,84,1178	0/0:29,0:29:87.28:0,87,1234	0/0:16,0:16:48.15:0,48,675	0/0:17,0:17:51.17:0,51,734	0/0:18,0:18:51.17:0,51,734	1/1:0,24:24:72.23:893,72,0	0/0:20,0:20:57.19:0,57,821	0/0:19,0:19:57.19:0,57,821	0/0:9,0:9:27.09:0,27,389	0/0:18,0:18:51.16:0,51,717	0/0:25,0:25:75.21:0,75,1024	0/0:12,0:12:33.10:0,33,457	0/0:20,0:20:57.18:0,57,803	0/0:26,0:26:69.23:0,69,993	0/0:15,0:15:42.14:0,42,605	0/0:22,0:22:66.20:0,66,916	0/0:31,0:31:93.28:0,93,1285	0/0:19,0:19:54.16:0,54,741	0/0:10,0:10:30.08:0,30,412
chr10	33947130	.	GAAGA	G	11519.02	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=11.820;DP=613;FS=0.335;HRun=0;HaplotypeScore=110.4571;InbreedingCoeff=0.9819;MQ=67.32;MQ0=2;MQRankSum=-3.554;QD=36.68;ReadPosRankSum=2.799;VQSLOD=4.6446;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,103,2572	1/1:2,2:4:6.02:104,6,0	0/0:34,0:28:30.74:0,31,742	0/0:25,0:20:38.54:0,39,766	0/0:26,0:26:72.25:0,72,1814	0/0:32,0:32:87.30:0,87,2124	0/0:22,0:22:57.20:0,57,1360	1/1:9,29:39:90.26:1468,90,0	0/0:20,0:20:51.18:0,51,1295	1/1:7,17:24:54.16:901,54,0	1/1:8,18:26:54.18:922,54,0	0/0:12,0:12:33.11:0,33,819	1/1:6,11:17:30.10:522,30,0	1/1:3,15:18:36.12:626,36,0	0/0:21,0:21:51.18:0,51,1223	1/1:2,19:21:39.13:677,39,0	0/0:21,0:22:47.83:0,48,1113	1/1:3,9:12:18.06:313,18,0	1/1:7,17:23:48.12:772,48,0	1/1:3,18:21:51.17:887,51,0	1/1:2,8:10:18.06:313,18,0	1/1:2,15:17:42.14:698,42,0	0/0:25,0:25:66.21:0,66,1623	0/0:16,0:16:42.14:0,42,1065	1/1:2,23:25:63.21:1080,63,0	1/1:4,23:27:66.23:1141,66,0	1/1:3,19:22:45.15:782,45,0	1/1:0,7:7:18.06:313,18,0
chr10	33947881	.	A	AT	357.63	PASS	AB=0.969;AC=3;AF=0.054;AN=56;BaseQRankSum=0.499;DP=559;FS=0.963;HRun=7;HaplotypeScore=77.9725;InbreedingCoeff=0.7059;MQ=88.13;MQ0=0;MQRankSum=0.182;QD=7.01;ReadPosRankSum=-0.986;VQSLOD=0.2749;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,15:20:39.04:452,39,0	0/0:7,0:7:18.02:0,18,169	0/1:30,1:27:4.91:5,0,245	0/0:24,0:24:46.06:0,46,397	0/0:26,0:26:72.10:0,72,690	0/0:26,0:26:69.09:0,69,660	0/0:10,0:10:27.04:0,27,261	0/0:35,0:35:84.07:0,84,787	0/0:13,0:13:30.02:0,30,279	0/0:22,0:21:57.09:0,57,550	0/0:26,0:26:78.09:0,78,742	0/0:12,0:12:33.04:0,33,313	0/0:23,0:23:63.10:0,63,608	0/0:14,0:14:39.06:0,39,377	0/0:15,0:15:36.04:0,36,341	0/0:16,0:16:48.05:0,48,452	0/0:16,0:16:42.04:0,42,398	0/0:18,0:18:54.07:0,54,514	0/0:22,0:22:63.06:0,63,590	0/0:24,0:24:69.08:0,69,658	0/0:23,0:23:60.06:0,60,568	0/0:16,0:16:42.07:0,42,405	0/0:23,0:23:69.06:0,69,651	0/0:19,0:19:57.09:0,57,550	0/0:18,0:18:45.07:0,45,434	0/0:16,0:16:48.08:0,48,464	0/0:31,0:31:93.11:0,93,882	0/0:13,0:13:39.03:0,39,367
chr10	33948317	.	T	TA	2766.37	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-7.992;DP=497;FS=0.919;HRun=8;HaplotypeScore=53.1852;InbreedingCoeff=0.8721;MQ=68.11;MQ0=0;MQRankSum=1.316;QD=25.61;ReadPosRankSum=2.633;VQSLOD=4.3851;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:50.97:0,51,451	0/0:9,0:9:23.98:0,24,211	0/0:9,0:7:5.15:0,5,21	0/0:8,0:6:5.33:0,5,51	1/1:6,28:34:75.10:821,75,0	1/1:1,17:18:48.14:556,48,0	1/1:1,16:17:39.12:451,39,0	0/0:36,0:36:99:0,99,896	1/1:2,18:20:51.15:590,51,0	0/0:27,0:27:69.02:0,69,626	0/0:28,0:28:72.01:0,72,649	0/0:1,0:10:12.22:0,12,36	0/0:16,0:16:44.97:0,45,400	0/0:12,0:12:29.99:0,30,269	0/0:1,0:10:12.22:0,12,36	0/0:16,0:16:45.01:0,45,405	1/1:0,19:19:45.13:521,45,0	0/0:20,0:20:53.99:0,54,482	0/0:9,0:9:21.01:0,21,192	0/0:35,0:35:90:0,90,811	0/0:5,0:5:11.98:0,12,105	0/0:20,0:20:48:0,48,434	0/0:1,0:12:3.64:0,4,25	0/0:0,0:3:6.11:0,6,18	0/0:22,0:22:60.01:0,60,544	0/0:28,0:28:75.03:0,75,683	0/0:27,0:27:78.03:0,78,710	0/0:8,0:8:24.01:0,24,220
chr10	33948642	.	CAACTTACA	C	9206.89	PASS	AB=0.944;AC=17;AF=0.304;AN=56;BaseQRankSum=15.043;DP=594;FS=3.403;HRun=0;HaplotypeScore=152.0477;InbreedingCoeff=0.9011;MQ=67.11;MQ0=0;MQRankSum=-15.574;QD=56.48;ReadPosRankSum=1.055;VQSLOD=4.9259;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:51.18:0,51,2208	0/0:7,0:7:21.07:0,21,892	0/0:12,0:12:33.10:0,33,1079	0/0:7,0:7:18.06:0,18,658	1/1:1,31:32:87.30:2414,87,0	1/1:2,22:24:57.20:1619,57,0	1/1:2,6:8:18.06:516,18,0	0/0:33,0:33:93.32:0,93,3930	1/1:3,16:19:42.14:1167,42,0	0/0:30,0:30:90.29:0,90,3606	0/0:31,0:31:93.32:0,93,4147	1/1:1,11:12:33.11:946,33,0	0/0:20,0:20:60.21:0,60,2595	0/0:27,0:27:81.28:0,81,3342	0/0:19,0:19:57.20:0,57,2458	0/1:16,1:17:34.87:35,0,2092	1/1:3,11:14:18.06:479,18,0	0/0:13,0:13:36.12:0,36,1531	0/0:19,0:19:57.18:0,57,2285	0/0:35,0:35:99:0,105,4536	0/0:17,0:17:48.16:0,48,1989	0/0:34,0:34:99:0,102,4237	1/1:4,23:27:63.10:1774,63,0	1/1:3,7:10:9.03:257,9,0	0/0:13,0:13:39.13:0,39,1738	0/0:38,0:38:99:0,114,4884	0/0:28,0:28:75.26:0,75,3324	0/0:31,0:31:93.28:0,93,4017
chr10	33949592	.	GAA	G	1464.12	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=12.334;DP=726;FS=21.202;HRun=4;HaplotypeScore=111.8894;InbreedingCoeff=1.0000;MQ=81.17;MQ0=0;MQRankSum=-11.525;QD=21.22;ReadPosRankSum=1.306;VQSLOD=0.7460;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,123,2331	0/0:14,0:14:42.14:0,42,766	0/0:19,0:19:54.66:0,55,956	0/0:23,0:23:60.84:0,61,933	0/0:24,0:24:72.24:0,72,1364	0/0:29,0:29:87.26:0,87,1544	0/0:28,0:28:81.23:0,81,1513	0/0:31,0:31:90.26:0,90,1663	0/0:32,0:32:96.33:0,96,1832	0/0:18,0:18:54.17:0,54,1009	0/0:19,0:19:57.17:0,57,980	1/1:3,22:25:66.14:674,66,0	0/0:21,0:21:63.22:0,63,1217	0/0:28,0:28:84.27:0,84,1546	0/0:28,0:28:84.28:0,84,1585	0/0:26,0:26:78.26:0,78,1468	0/0:30,0:30:90.22:0,90,1629	0/0:18,0:18:54.17:0,54,1001	0/0:26,0:26:78.27:0,78,1494	0/0:29,0:29:84.27:0,84,1558	0/0:50,0:50:99:0,147,2767	0/0:20,0:20:60.20:0,60,1122	1/1:2,17:22:48.07:481,48,0	1/1:5,16:22:49.62:452,50,0	0/0:23,0:23:69.23:0,69,1284	0/0:29,0:29:87.28:0,87,1630	0/0:27,0:26:81.28:0,81,1556	0/0:24,0:24:69.24:0,69,1317
chr10	33949596	.	GATACCC	G	3010.48	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=12.445;DP=727;FS=15.981;HRun=0;HaplotypeScore=168.6910;InbreedingCoeff=1.0000;MQ=84.82;MQ0=0;MQRankSum=-11.250;QD=48.56;ReadPosRankSum=0.987;VQSLOD=2.3898;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,129,4522	0/0:14,0:14:42.14:0,42,1533	0/0:22,0:22:52.67:0,53,1896	0/0:27,0:27:70.94:0,71,2253	0/0:24,0:24:72.23:0,72,2536	0/0:29,0:29:84.29:0,84,2951	0/0:25,0:25:72.25:0,72,2531	0/0:31,0:31:93.30:0,93,3081	0/0:31,0:31:92.67:0,93,3176	0/0:19,0:19:57.20:0,57,1937	0/0:19,0:19:57.20:0,57,2060	1/1:1,22:23:69.24:1335,69,0	0/0:22,0:22:66.23:0,66,2413	0/0:26,0:26:78.27:0,78,2820	0/0:30,0:30:87.28:0,87,2956	0/0:24,0:24:72.23:0,72,2543	0/0:33,0:33:96.33:0,96,3472	0/0:19,0:19:57.20:0,57,1980	0/0:27,0:27:78.25:0,78,2662	0/0:28,0:28:84.29:0,84,3000	0/0:48,0:48:99:0,144,5236	0/0:20,0:20:60.20:0,60,2088	1/1:3,17:20:47.94:930,48,0	1/1:3,16:19:47.87:888,48,0	0/0:23,0:23:69.24:0,69,2448	0/0:29,0:29:87.28:0,87,3031	0/0:28,0:27:84.29:0,84,3033	0/0:24,0:24:66.23:0,66,2221
chr10	33949753	.	TG	T	1455.42	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.905;DP=699;FS=11.783;HRun=1;HaplotypeScore=65.3070;InbreedingCoeff=0.9976;MQ=82.43;MQ0=0;MQRankSum=-2.789;QD=33.85;ReadPosRankSum=0.119;VQSLOD=2.3185;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,43:43:99:1550,111,0	0/0:9,0:9:27.09:0,27,431	0/0:20,0:20:53.19:0,53,783	0/0:22,0:22:30.91:0,31,708	0/0:23,0:23:69.24:0,69,1100	0/0:25,0:25:75.24:0,75,1158	0/0:24,0:24:72.25:0,72,1150	0/0:32,0:32:96.31:0,96,1473	0/0:27,0:27:81.26:0,81,1263	0/0:28,0:28:84.28:0,84,1322	0/0:18,0:18:54.16:0,54,818	0/0:19,0:19:54.18:0,54,861	0/0:24,0:24:69.20:0,69,1052	0/0:38,0:38:99:0,114,1732	0/0:32,0:32:96.33:0,96,1529	0/0:24,0:24:72.25:0,72,1147	0/0:41,0:41:99:0,123,1912	0/0:10,0:10:30.09:0,30,455	0/0:19,0:19:54.18:0,54,860	0/0:24,0:24:72.23:0,72,1114	0/0:23,0:23:69.21:0,69,1049	0/0:29,0:29:87.27:0,87,1340	0/0:24,0:24:72.22:0,72,1102	0/0:24,0:24:72.13:0,72,1072	0/0:27,0:27:78.26:0,78,1230	0/0:30,0:30:90.21:0,90,1376	0/0:30,0:30:90.31:0,90,1431	0/0:10,0:10:30.10:0,30,479
chr10	33949939	.	A	ATTG	26285.21	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=0.311;DP=743;FS=8.448;HRun=0;HaplotypeScore=121.3715;InbreedingCoeff=0.9575;MQ=77.03;MQ0=0;MQRankSum=-3.641;QD=39.17;ReadPosRankSum=1.007;VQSLOD=5.9819;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,19:32:81.28:1546,81,0	1/1:5,8:13:24.08:486,24,0	0/0:33,0:30:17.95:0,18,229	0/0:16,0:17:20.90:0,21,271	1/1:8,21:29:57.11:1106,57,0	1/1:8,21:29:60.21:1214,60,0	1/1:4,11:15:30.10:601,30,0	1/1:22,12:36:39.58:704,40,0	1/1:6,22:28:54.18:1093,54,0	1/1:14,26:40:84.27:1664,84,0	1/1:7,18:26:51.17:1023,51,0	1/1:6,21:27:63.22:1271,63,0	1/1:7,23:30:60.21:1193,60,0	1/1:9,18:27:63.22:1247,63,0	0/0:22,0:22:57.17:0,57,779	1/1:6,13:19:24.08:486,24,0	1/1:8,17:25:48.16:971,48,0	1/1:6,12:17:32.98:650,33,0	1/1:18,9:29:39.10:704,39,0	1/1:10,21:31:66.23:1315,66,0	1/1:8,21:30:63.22:1276,63,0	1/1:5,17:22:45.15:885,45,0	1/1:9,18:28:53.86:1068,54,0	1/1:6,14:20:36.12:729,36,0	1/1:12,23:35:66.23:1336,66,0	1/1:6,29:36:96.33:1898,96,0	1/1:10,28:41:87.30:1694,87,0	1/1:2,2:4:6.02:122,6,0
chr10	33951884	.	GCA	G	5225.15	PASS	AB=0.693;AC=28;AF=0.500;AN=56;BaseQRankSum=5.611;DP=679;FS=0.000;HRun=0;HaplotypeScore=188.0731;InbreedingCoeff=0.6554;MQ=54.05;MQ0=11;MQRankSum=-7.425;QD=17.53;ReadPosRankSum=0.627;VQSLOD=4.8711;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:46:62.24:0,62,1026	0/1:8,1:9:23.39:106,0,23	0/0:62,0:37:70.71:0,71,1241	0/0:68,0:43:96.11:0,96,1683	0/0:32,0:32:66:0,66,1117	0/0:27,0:27:39.34:0,39,633	0/0:18,0:17:27.52:0,28,469	1/1:16,17:31:21.52:748,22,0	0/0:18,0:17:30.10:0,30,507	0/1:7,13:19:99:508,0,110	1/1:8,9:17:14.78:179,15,0	0/0:16,0:16:19.30:0,19,310	0/1:6,7:13:29.96:246,0,30	1/1:10,6:16:7.32:139,7,0	0/0:20,0:20:52.42:0,52,881	1/1:5,4:8:6.93:166,7,0	0/0:25,0:25:41.93:0,42,850	1/1:0,6:6:15.03:203,15,0	0/1:6,10:16:98.83:359,0,99	1/1:13,19:32:20.85:282,21,0	1/1:2,21:23:2.99:39,3,0	1/1:11,24:33:39.13:525,39,0	0/0:18,0:17:45.08:0,45,722	0/0:28,0:28:48.16:0,48,841	1/1:11,12:22:39.08:491,39,0	1/1:7,13:19:24.46:591,24,0	1/1:8,7:14:11.31:278,11,0	1/1:3,8:10:27.09:364,27,0
chr10	33951901	.	CAT	C	141.76	PASS	AB=0.963;AC=12;AF=0.214;AN=56;BaseQRankSum=4.816;DP=679;FS=35.738;HRun=0;HaplotypeScore=217.4814;InbreedingCoeff=-0.0596;MQ=45.03;MQ0=20;MQRankSum=-1.946;QD=0.59;ReadPosRankSum=-2.350;VQSLOD=1.2009;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:50:76.73:0,77,1121	0/1:9,1:10:17.69:18,0,22	0/0:58,0:22:53.95:0,54,940	0/0:75,0:38:99:0,104,1724	0/0:31,0:31:53.96:0,54,1002	0/0:32,0:32:39.39:0,39,636	0/0:18,0:17:30.93:0,31,472	0/1:29,0:24:23.59:24,0,249	0/0:18,0:17:33.04:0,33,520	0/1:22,0:21:13.05:13,0,236	0/0:11,0:11:2.98:0,3,32	0/1:17,0:17:62.29:62,0,103	0/0:11,1:12:7.97:0,8,79	0/1:9,2:11:0.23:33,0,0	0/0:20,0:20:39.45:0,39,774	0/1:10,1:10:0.23:0,0,55	0/0:27,0:26:36.31:0,36,905	0/0:6,0:6:14.81:0,15,101	0/0:11,0:10:19.71:0,20,140	0/1:29,0:29:17.84:18,0,94	1/1:22,0:21:2.43:12,2,0	0/1:37,0:35:10.24:10,0,156	0/0:21,0:18:15.60:0,16,581	0/1:32,0:32:65.13:65,0,652	0/0:19,1:19:11.54:0,12,117	0/1:20,1:20:26.54:27,0,256	0/0:13,0:12:5.62:0,6,81	0/0:14,0:13:4.35:0,4,131
chr10	33951907	.	CGT	C	4190.73	PASS	AB=0.957;AC=38;AF=0.679;AN=56;BaseQRankSum=11.306;DP=617;FS=11.717;HRun=0;HaplotypeScore=197.2938;InbreedingCoeff=0.3706;MQ=44.82;MQ0=20;MQRankSum=-8.027;QD=10.30;ReadPosRankSum=-2.003;VQSLOD=2.2760;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:48:66.26:0,66,1023	1/1:7,5:12:13.21:185,13,0	0/0:47,0:18:51.15:0,51,948	0/0:66,1:30:77.87:0,78,1309	0/0:28,1:29:50.96:0,51,989	0/1:29,2:31:99:105,0,444	0/1:19,0:18:39.16:39,0,382	1/1:21,2:19:53.63:422,54,0	0/1:16,0:15:46.72:47,0,330	1/1:18,4:20:52.70:519,53,0	0/1:9,0:9:0.04:0,0,1	0/1:9,3:12:46.46:143,0,46	1/1:8,3:11:24.04:217,24,0	1/1:10,2:12:17.47:156,17,0	0/0:16,0:16:22.41:0,22,676	1/1:6,5:10:15.15:105,15,0	0/1:29,0:28:99:140,0,658	1/1:7,0:7:17.67:165,18,0	1/1:5,0:4:11.89:86,12,0	1/1:24,4:28:20.16:250,20,0	1/1:16,0:15:5.59:47,6,0	1/1:27,4:29:44.04:403,44,0	0/1:19,2:18:76.52:77,0,497	0/1:28,0:28:99:174,0,649	1/1:18,2:19:16.71:168,17,0	1/1:14,4:17:49.48:382,49,0	1/1:10,2:12:19.26:123,19,0	1/1:11,3:13:27.44:238,27,0
chr10	33951911	.	CAT	C	777.15	PASS	AB=0.991;AC=26;AF=0.464;AN=56;BaseQRankSum=6.748;DP=633;FS=42.499;HRun=0;HaplotypeScore=212.2712;InbreedingCoeff=-0.1257;MQ=43.39;MQ0=19;MQRankSum=-3.015;QD=1.95;ReadPosRankSum=-2.531;VQSLOD=1.1864;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:47:57.75:0,58,627	0/1:12,0:12:6.55:57,0,7	0/0:42,0:14:35.64:0,36,302	0/0:61,0:27:57.98:0,58,488	0/0:28,0:28:47.01:0,47,365	0/1:33,0:33:7.33:7,0,484	0/0:20,0:19:31.21:0,31,315	0/1:28,0:24:41.80:42,0,42	0/0:16,0:15:18.52:0,19,259	0/1:26,0:24:73.47:109,0,73	0/1:9,0:9:0.04:0,0,1	0/1:12,0:12:8.58:71,0,9	0/1:11,0:11:3.12:45,0,3	1/1:11,2:13:15.63:100,16,0	0/0:17,0:17:25.12:0,25,525	0/1:12,0:11:12.12:22,0,12	0/1:29,1:29:44.04:44,0,448	1/1:7,0:7:4.57:22,5,0	1/1:6,0:5:3.77:10,4,0	0/1:28,0:28:13.35:46,0,13	1/1:17,0:16:0.16:1,0,0	1/1:34,0:32:4.77:86,5,0	0/1:24,0:20:30.21:30,0,172	0/1:27,0:27:84.59:85,0,232	0/1:23,0:22:36.49:37,0,36	0/1:19,1:19:16.47:74,0,16	0/1:12,1:13:10.48:10,0,52	0/1:14,0:13:22.66:39,0,23
chr10	33951919	.	CA	C	1369.13	PASS	AB=0.790;AC=14;AF=0.250;AN=56;BaseQRankSum=9.813;DP=632;FS=4.490;HRun=1;HaplotypeScore=199.9227;InbreedingCoeff=-0.3523;MQ=41.93;MQ0=20;MQRankSum=-8.609;QD=5.23;ReadPosRankSum=-0.855;VQSLOD=-0.0570;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:2,0:48:60.17:0,60,390	0/0:12,2:14:4.07:0,4,280	0/0:37,0:12:33.11:0,33,448	0/0:54,0:19:53.90:0,54,633	0/0:25,0:25:35.39:0,35,467	0/0:35,0:35:53.99:0,54,655	0/0:21,0:20:39.35:0,39,516	0/1:14,11:21:99:220,0,493	0/0:17,0:16:30.10:0,30,418	0/1:23,5:26:99:167,0,637	0/0:8,4:12:2.80:0,3,38	0/0:14,0:14:18.05:0,18,224	0/1:10,3:13:73.11:73,0,179	0/1:11,4:15:13:13,0,234	0/0:18,0:18:46.96:0,47,657	0/1:10,2:11:59.70:86,0,60	0/0:28,0:27:69.05:0,69,852	0/1:4,3:7:62.88:105,0,63	0/1:6,1:6:23.86:24,0,136	0/1:18,11:29:86.86:87,0,294	0/1:17,3:19:29.71:30,0,43	0/1:23,8:29:84.62:85,0,320	0/0:22,0:18:33.10:0,33,425	0/0:24,0:24:42.13:0,42,541	0/1:17,9:25:99:173,0,266	0/1:17,4:19:99:149,0,438	0/1:12,4:16:99:112,0,200	0/1:7,5:11:94.86:200,0,95
chr10	33951921	.	C	CAT	1244.74	PASS	AB=0.987;AC=12;AF=0.214;AN=56;BaseQRankSum=-3.049;DP=635;FS=4.962;HRun=0;HaplotypeScore=212.7921;InbreedingCoeff=0.1283;MQ=41.78;MQ0=20;MQRankSum=4.083;QD=5.37;ReadPosRankSum=3.052;VQSLOD=2.4135;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:47,2:48:45.12:544,45,0	0/0:14,0:14:19.97:0,20,154	0/0:37,0:11:29.90:0,30,277	0/0:51,0:18:39.72:0,40,362	1/1:24,0:24:8.40:206,8,0	0/1:33,1:34:99:189,0,251	0/1:21,1:21:90.91:91,0,247	0/0:26,0:22:49.27:0,49,284	0/1:17,0:16:84.07:84,0,140	0/0:29,0:27:34.30:0,34,332	0/0:13,0:13:5.58:0,6,49	0/1:15,0:15:4.96:5,0,33	0/1:13,0:13:2.15:2,0,52	0/1:15,0:15:15.20:15,0,71	0/0:18,0:18:19.82:0,20,482	0/0:12,0:11:12.11:0,12,67	0/1:26,1:26:99:254,0,200	0/0:8,0:8:9.04:0,9,45	0/0:8,0:7:10.64:0,11,61	0/0:29,0:29:28.30:0,28,206	0/0:22,0:21:6.91:0,7,44	0/0:30,0:29:19.68:0,20,207	0/0:21,0:17:5.86:0,6,143	0/0:24,0:24:25:0,25,272	0/0:26,0:25:28.80:0,29,201	0/0:21,0:19:14.34:0,14,240	0/1:16,0:16:1.31:1,0,111	0/0:13,0:12:5.46:0,5,87
chr10	33952008	.	G	GTGGCTAGGTCTAGCAGGC	67865.11	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-3.194;DP=504;FS=1.303;HRun=0;HaplotypeScore=239.5666;InbreedingCoeff=0.9733;MQ=70.43;MQ0=0;MQRankSum=-10.065;QD=149.15;ReadPosRankSum=1.738;VQSLOD=4.6485;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:26,7:32:69.23:4502,69,0	1/1:7,1:8:18.05:1268,18,0	0/0:9,0:9:23.67:0,24,885	0/0:25,0:25:57.19:0,57,2381	1/1:14,5:20:27.09:2294,27,0	1/1:23,6:31:69.24:4409,69,0	1/1:14,1:16:33.07:2266,33,0	1/1:21,0:21:63.17:3332,63,0	1/1:18,8:27:75.21:5157,75,0	1/1:15,5:21:63.22:3488,63,0	1/1:16,6:23:39.09:2540,39,0	1/1:12,4:16:48.16:3700,48,0	1/1:5,4:11:27.09:1951,27,0	1/1:8,1:9:24.04:985,24,0	0/0:15,0:15:42.11:0,42,1897	1/1:7,2:10:24.08:1799,24,0	1/1:8,3:14:27.09:2121,27,0	1/1:5,1:8:15.05:1211,15,0	1/1:17,0:17:48.15:1676,48,0	1/1:18,4:22:39.13:3092,39,0	1/1:6,0:6:12.04:362,12,0	1/1:16,9:25:51.17:3480,51,0	1/1:14,2:18:17.97:907,18,0	1/1:7,3:11:22.89:1798,23,0	1/1:18,8:28:66.22:4567,66,0	1/1:20,3:27:75.26:4498,75,0	1/1:14,6:21:60.20:4183,60,0	1/1:5,3:9:27.09:2279,27,0
chr10	33952391	.	T	TC	22863.33	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-11.830;DP=684;FS=0.884;HRun=2;HaplotypeScore=61.7025;InbreedingCoeff=0.9971;MQ=95.77;MQ0=0;MQRankSum=-10.099;QD=38.43;ReadPosRankSum=5.464;VQSLOD=5.0695;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,41:42:99:1599,111,0	1/1:1,8:9:21.07:302,21,0	0/0:29,0:29:84.26:0,84,1038	0/0:36,0:36:99:0,99,1207	1/1:2,33:35:99:1359,99,0	1/1:0,27:28:78.26:1118,78,0	1/1:2,24:26:66.22:951,66,0	1/1:3,32:35:96.30:1345,96,0	1/1:0,16:16:45.15:648,45,0	1/1:3,36:39:99:1456,105,0	1/1:2,26:28:72.24:1037,72,0	1/1:0,19:19:57.19:821,57,0	1/1:1,25:26:69.19:969,69,0	1/1:2,14:16:42.14:605,42,0	0/0:24,0:24:72.23:0,72,893	1/1:0,24:24:60.20:864,60,0	1/1:2,17:19:42.96:724,43,0	1/1:1,8:9:24.08:346,24,0	1/1:3,18:21:57.15:795,57,0	1/1:0,19:19:54.18:777,54,0	1/1:2,24:25:63.21:906,63,0	1/1:0,27:27:75.25:1080,75,0	1/1:0,23:23:63.21:906,63,0	1/1:1,10:11:24.08:346,24,0	1/1:0,15:15:45.15:648,45,0	1/1:0,23:23:69.21:974,69,0	1/1:0,33:33:84.28:1209,84,0	1/1:0,26:26:75.25:1080,75,0
chr10	33953884	.	C	CATTTG	6625.84	PASS	AB=0.950;AC=13;AF=0.232;AN=56;BaseQRankSum=13.124;DP=647;FS=4.162;HRun=0;HaplotypeScore=126.4796;InbreedingCoeff=0.8916;MQ=88.48;MQ0=0;MQRankSum=-13.423;QD=64.33;ReadPosRankSum=1.559;VQSLOD=5.7011;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,25:26:72.25:2139,72,0	0/0:7,0:7:18.06:0,18,419	0/0:33,0:33:93.28:0,93,1960	0/0:36,0:36:99:0,100,2187	1/1:0,8:8:12.04:339,12,0	1/1:1,12:14:39.13:1188,39,0	1/1:1,12:13:33.11:994,33,0	0/0:37,0:37:99:0,111,2402	1/1:0,14:14:39.13:1220,39,0	0/0:43,0:43:99:0,126,2899	0/0:19,0:19:50.87:0,51,1173	0/0:23,0:23:69.21:0,69,1499	0/0:26,0:26:78.26:0,78,1761	0/0:25,0:25:69.20:0,69,1427	0/0:28,0:28:84.23:0,84,1824	0/1:18,1:19:35.01:35,0,1120	1/1:0,8:9:24.08:711,24,0	0/0:25,0:25:75.24:0,75,1700	0/0:20,0:20:54.14:0,54,1194	0/0:15,0:15:45.15:0,45,997	0/0:45,0:45:99:0,132,2987	0/0:31,0:31:87.30:0,87,2007	0/0:15,0:15:42.10:0,42,928	0/0:33,0:33:96.31:0,96,2178	0/0:17,0:17:48.16:0,48,1051	0/0:30,0:30:90.31:0,90,2067	0/0:25,0:25:75.26:0,75,1696	0/0:11,0:11:30.10:0,30,649
chr10	33954171	.	TGCGCACGTGCGCAC	T	1183.56	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=4.512;DP=490;FS=10.922;HRun=0;HaplotypeScore=193.7494;InbreedingCoeff=0.8157;MQ=76.11;MQ0=1;MQRankSum=-4.762;QD=11.49;ReadPosRankSum=0.180;VQSLOD=1.9142;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:2,23:25:6.02:121,6,0	0/0:6,0:6:18.05:0,18,720	0/0:17,0:12:11.83:0,12,170	0/0:27,0:18:23.31:0,23,333	1/1:0,13:13:0.47:1,0,0	1/1:3,11:14:0.94:2,1,0	1/1:2,15:17:3.48:101,3,0	0/0:26,0:23:51.16:0,51,2042	1/1:7,14:20:6.02:245,6,0	0/0:16,0:16:36.12:0,36,1536	0/0:11,0:11:27.09:0,27,1233	0/0:17,0:17:42.14:0,42,1729	0/0:14,0:14:36.12:0,36,1686	0/0:18,0:18:32.95:0,33,1480	0/0:14,0:14:39.12:0,39,2217	0/0:12,1:13:23.68:0,24,1050	1/1:7,6:13:24.08:851,24,0	0/0:21,0:21:60.14:0,60,2663	0/0:12,0:12:33.10:0,33,1147	0/0:13,0:13:30.10:0,30,1160	0/0:47,0:47:99:0,111,5056	0/0:16,0:16:39.13:0,39,1788	0/0:15,0:15:39.13:0,39,2008	0/0:26,0:26:59.41:0,59,3659	0/0:18,0:18:47.19:0,47,2192	0/0:14,0:14:36.12:0,36,1988	0/0:16,0:15:39.12:0,39,1441	0/0:10,0:10:27.09:0,27,1374
chr10	33954200	.	ACACACG	A	2023.47	PASS	AB=1.000;AC=31;AF=0.596;AN=52;BaseQRankSum=-4.629;DP=533;FS=3.711;HRun=0;HaplotypeScore=141.1371;InbreedingCoeff=-0.0731;MQ=52.06;MQ0=18;MQRankSum=-3.489;QD=4.96;ReadPosRankSum=-2.728;VQSLOD=1.8918;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:30:9.02:122,9,0	0/1:7,0:7:29.68:30,0,189	./.	./.	1/1:13,1:14:3.01:48,3,0	0/1:16,0:16:0.18:1,0,0	1/1:21,0:21:0.79:2,1,0	1/1:23,0:18:21.61:245,22,0	1/1:14,2:16:5.93:85,6,0	0/1:15,0:15:48.39:153,0,48	0/1:10,0:10:64.80:65,0,185	0/0:18,0:18:25.67:0,26,436	0/1:20,0:20:42.37:42,0,311	0/1:19,0:19:42.04:42,0,202	0/0:18,0:17:47.60:0,48,857	0/1:12,0:11:16.80:17,0,73	1/1:16,1:17:23.80:168,24,0	0/1:20,0:19:99:196,0,156	1/1:9,0:9:9.80:64,10,0	1/1:10,0:10:14.39:124,14,0	0/1:63,0:60:99:302,0,164	1/1:18,0:18:4.36:112,4,0	0/0:9,0:9:14.94:0,15,220	0/0:45,0:44:66.81:0,67,1463	0/1:21,0:21:90.94:91,0,229	0/1:19,0:19:99:135,0,144	0/1:19,0:18:99:128,0,233	0/1:9,0:8:14.44:14,0,126
chr10	33954204	.	ACG	A	4107.15	PASS	AB=1.000;AC=41;AF=0.788;AN=52;BaseQRankSum=-1.968;DP=546;FS=2.256;HRun=0;HaplotypeScore=114.2618;InbreedingCoeff=0.6200;MQ=48.48;MQ0=19;MQRankSum=-1.034;QD=9.66;ReadPosRankSum=-3.976;VQSLOD=2.9190;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:35,0:35:8.89:72,9,0	0/1:7,0:7:1.70:59,0,2	./.	./.	1/1:13,1:14:2.88:24,3,0	0/1:17,0:17:0.28:1,0,0	1/1:23,0:23:8.95:74,9,0	1/1:22,0:16:30.61:311,31,0	1/1:22,0:22:23.85:182,24,0	1/1:16,1:17:25.06:359,25,0	1/1:9,1:10:7.29:99,7,0	0/0:16,0:16:24.68:0,25,236	0/1:20,0:20:10.52:185,0,11	1/1:20,0:20:1.20:118,1,0	0/0:18,0:17:40.75:0,41,506	1/1:11,0:10:13.13:110,13,0	1/1:19,0:19:27.65:167,28,0	1/1:20,0:19:23.85:284,24,0	1/1:8,0:8:13.24:75,13,0	1/1:10,0:10:17.57:149,18,0	1/1:62,2:61:99:815,103,0	1/1:17,1:18:24:225,24,0	0/0:8,0:8:14.77:0,15,113	0/0:47,0:46:66.18:0,66,834	1/1:20,0:20:13.26:184,13,0	1/1:18,0:18:27.08:252,27,0	1/1:21,0:20:5.26:256,5,0	1/1:9,0:8:11.90:109,12,0
chr10	33954206	.	G	GCA	630.84	PASS	AB=0.974;AC=23;AF=0.442;AN=52;BaseQRankSum=-1.840;DP=559;FS=0.000;HRun=0;HaplotypeScore=133.3787;InbreedingCoeff=0.1309;MQ=47.07;MQ0=18;MQRankSum=0.029;QD=1.90;ReadPosRankSum=-2.577;VQSLOD=1.9765;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:37,0:37:4.83:21,5,0	0/0:8,0:8:8.12:0,8,46	./.	./.	0/0:14,0:14:0:0,0,0	0/1:17,0:17:0.16:0,0,0	1/1:25,0:25:5.74:48,6,0	1/1:24,0:18:7.95:37,8,0	0/1:21,0:21:5.58:18,0,6	0/1:17,0:17:14.81:15,0,25	0/0:10,0:10:6.45:0,6,21	1/1:7,10:18:0.91:166,1,0	0/0:19,0:19:17.87:0,18,111	0/0:21,0:21:11.43:0,11,67	0/0:16,0:17:6.80:0,7,235	0/0:11,0:10:4.66:0,5,20	0/1:20,0:20:8.12:18,0,8	0/1:20,0:19:14.93:15,0,37	1/1:9,0:9:1.25:3,1,0	1/1:11,0:11:3:25,3,0	0/0:65,0:61:4.41:0,4,25	0/1:19,0:19:5.47:18,0,5	1/1:4,3:7:3.01:45,3,0	0/1:33,14:47:99:213,0,191	0/1:21,0:21:22.29:74,0,22	0/1:18,0:18:3.47:59,0,3	0/0:21,0:20:8.57:0,9,75	0/0:11,0:10:4.35:0,4,17
chr10	33954298	.	T	TTCTC	17485.70	PASS	AB=0.542;AC=31;AF=0.554;AN=56;BaseQRankSum=-4.087;DP=547;FS=30.133;HRun=0;HaplotypeScore=120.6973;InbreedingCoeff=0.9233;MQ=87.41;MQ0=0;MQRankSum=-9.818;QD=61.14;ReadPosRankSum=2.354;VQSLOD=3.6178;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:48.14:0,48,837	1/1:2,3:5:6.02:158,6,0	0/0:21,0:21:36.58:0,37,861	0/0:24,0:24:51.69:0,52,895	0/0:16,0:16:48.16:0,48,883	0/0:21,0:21:60.21:0,60,1103	0/0:20,0:20:45.11:0,45,790	1/1:4,14:18:48.16:1211,48,0	0/0:19,0:19:48.11:0,48,817	1/1:4,16:20:51.18:1346,51,0	1/1:3,9:12:21.07:554,21,0	0/0:15,0:15:42.13:0,42,738	1/1:0,10:10:30.10:791,30,0	1/1:6,29:36:84.29:2207,84,0	0/0:21,0:21:60.21:0,60,1097	1/1:3,20:23:11.06:1549,11,0	0/0:32,0:32:81.26:0,81,1441	1/1:2,10:12:33.11:853,33,0	1/1:0,6:6:18.06:450,18,0	1/1:3,10:13:33.07:759,33,0	1/1:10,18:28:30.10:792,30,0	1/1:0,13:13:33.11:869,33,0	0/0:17,0:17:48.15:0,48,852	0/0:31,0:31:78.27:0,78,1419	1/1:3,24:27:66.23:1740,66,0	1/1:8,17:25:69.24:1734,69,0	1/1:2,22:24:66.23:1716,66,0	0/1:2,11:13:5.06:758,0,5
chr10	33954352	.	G	GGA	1808.78	PASS	AB=0.544;AC=12;AF=0.214;AN=56;BaseQRankSum=-4.428;DP=581;FS=6.814;HRun=0;HaplotypeScore=123.0216;InbreedingCoeff=0.0892;MQ=70.08;MQ0=1;MQRankSum=1.516;QD=7.44;ReadPosRankSum=0.093;VQSLOD=2.6157;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,0:30:35.96:386,36,0	0/0:0,0:7:9.02:0,9,23	0/0:19,0:19:29.01:0,29,606	0/0:20,0:19:45.10:0,45,634	0/1:4,0:29:58.15:335,0,58	0/1:4,0:20:24.35:218,0,24	0/1:4,0:28:47.51:304,0,48	0/1:5,0:35:22.09:22,0,159	0/1:5,1:15:67.28:97,0,67	0/0:3,0:27:2.54:0,3,87	0/0:2,0:17:27.88:0,28,108	0/0:18,0:18:51.16:0,51,783	0/0:2,0:12:2.35:0,2,28	0/0:4,0:20:34.62:0,35,152	0/0:27,0:27:81.19:0,81,1249	0/0:8,0:20:12.21:0,12,143	1/1:2,0:26:28.79:444,29,0	0/0:2,0:15:21.30:0,21,63	0/1:3,0:18:50.51:51,0,56	0/1:0,0:11:14.31:46,0,14	0/0:6,0:17:31.94:0,32,209	0/0:2,0:25:33.70:0,34,139	0/0:17,0:17:48.15:0,48,729	0/0:25,0:25:72.15:0,72,1099	0/0:3,0:19:2.05:0,2,83	0/1:5,0:29:66.59:67,0,113	0/0:0,0:18:25.47:0,25,65	0/0:3,0:12:19.28:0,19,76
chr10	33955077	.	G	GT	23728.85	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-12.649;DP=756;FS=6.945;HRun=1;HaplotypeScore=71.1686;InbreedingCoeff=0.9958;MQ=63.74;MQ0=3;MQRankSum=1.466;QD=36.96;ReadPosRankSum=-0.099;VQSLOD=5.0014;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,35:36:87.29:1272,87,0	1/1:0,10:9:21.07:307,21,0	0/0:12,0:12:16.30:0,16,345	0/0:10,0:8:20.92:0,21,227	1/1:0,33:33:86.92:1141,87,0	1/1:1,26:27:55.80:871,56,0	1/1:1,32:33:84.28:1229,84,0	1/1:1,38:38:99:1592,114,0	1/1:0,22:23:57.19:822,57,0	1/1:0,28:28:81.25:1161,81,0	1/1:1,22:23:61.76:880,62,0	0/0:21,0:21:63.21:0,63,865	1/1:0,22:22:48.16:702,48,0	1/1:2,40:41:99:1516,105,0	0/0:30,0:30:81.26:0,81,1114	1/1:0,33:33:90.30:1317,90,0	1/1:0,33:33:90.25:1292,90,0	1/1:0,14:14:39.13:569,39,0	1/1:0,17:17:51.09:680,51,0	1/1:0,21:21:57.01:751,57,0	1/1:2,69:71:99:2574,178,0	1/1:1,29:30:74.99:1097,75,0	0/0:23,0:23:66.22:0,66,920	0/0:18,0:18:51.16:0,51,694	1/1:1,34:35:87.22:1247,87,0	1/1:0,28:28:84.18:1131,84,0	1/1:0,30:30:75.25:1096,75,0	1/1:0,14:14:33.11:481,33,0
chr10	33955669	.	GA	G	3879.73	PASS	AB=0.737;AC=18;AF=0.321;AN=56;BaseQRankSum=-13.316;DP=547;FS=2.179;HRun=10;HaplotypeScore=126.7082;InbreedingCoeff=0.8676;MQ=55.52;MQ0=3;MQRankSum=8.617;QD=18.65;ReadPosRankSum=9.065;VQSLOD=2.1558;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:3,34:37:95.97:833,96,0	0/0:5,0:8:10.73:0,11,68	0/1:9,1:8:5.02:5,0,166	0/0:13,0:10:12.03:0,12,130	1/1:4,9:13:23.97:208,24,0	1/1:0,32:32:86.98:755,87,0	1/1:2,18:20:47.98:417,48,0	0/0:14,0:21:36.44:0,36,191	1/1:5,14:19:32.97:286,33,0	0/0:12,0:30:51.43:0,51,270	0/0:14,0:22:48.25:0,48,295	1/1:0,17:17:35.61:312,36,0	0/0:10,0:14:20.49:0,20,112	0/0:10,0:20:37.74:0,38,177	0/0:30,0:30:81.21:0,81,889	0/0:7,0:15:33.56:0,34,170	1/1:5,19:24:20.79:410,21,0	0/0:8,0:15:19.50:0,19,93	0/0:11,0:16:25.15:0,25,162	0/0:10,0:17:34.73:0,35,205	0/0:5,0:11:19.48:0,19,118	0/0:15,0:31:51.66:0,52,353	0/1:3,10:13:3.20:205,0,3	1/1:3,19:23:53.02:449,53,0	0/0:8,0:16:34.27:0,34,181	0/0:13,0:22:41.01:0,41,229	0/0:8,0:24:57.78:0,58,313	0/0:6,0:9:22.37:0,22,131
chr10	33955691	.	T	TACA	14175.89	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=0.163;DP=577;FS=1.970;HRun=0;HaplotypeScore=119.2042;InbreedingCoeff=0.9801;MQ=68.10;MQ0=0;MQRankSum=-15.195;QD=46.18;ReadPosRankSum=-3.525;VQSLOD=5.5473;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:87.27:0,87,1310	1/1:1,6:7:18.06:383,18,0	0/0:27,0:26:54.17:0,54,799	0/0:16,0:15:33.11:0,33,506	0/0:12,0:12:36.12:0,36,551	0/0:33,0:33:81.28:0,81,1242	0/0:19,0:19:48.16:0,48,736	1/1:10,24:36:87.28:1696,87,0	0/0:22,0:22:48.15:0,48,713	1/1:7,22:29:69.23:1434,69,0	1/1:6,13:19:36.12:766,36,0	0/0:20,0:20:45.15:0,45,690	1/1:4,12:16:39.13:812,39,0	1/1:3,21:24:63.22:1336,63,0	0/0:29,0:29:69.23:0,69,1057	1/1:5,15:20:5.15:931,5,0	0/0:24,0:24:72.19:0,72,1056	1/1:3,13:16:33.11:703,33,0	1/1:7,8:17:33.06:619,33,0	1/1:2,11:13:30.10:638,30,0	1/1:4,7:12:18.06:383,18,0	1/1:9,13:23:36.08:708,36,0	0/0:13,0:13:30.09:0,30,438	0/0:22,0:22:60.19:0,60,898	1/1:1,12:16:39.13:827,39,0	1/1:3,17:20:54.12:1064,54,0	1/1:7,22:29:66.21:1365,66,0	1/1:0,8:9:24.08:512,24,0
chr10	33955901	.	AG	A	9959.39	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=11.270;DP=551;FS=0.000;HRun=2;HaplotypeScore=58.3309;InbreedingCoeff=0.9965;MQ=86.65;MQ0=0;MQRankSum=-3.861;QD=34.34;ReadPosRankSum=1.912;VQSLOD=4.9927;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,114,1684	1/1:0,5:5:15.05:195,15,0	0/0:22,0:22:53.34:0,53,782	0/0:19,0:19:51.02:0,51,675	0/0:20,0:20:54.18:0,54,806	0/0:19,0:19:57.18:0,57,834	0/0:22,0:22:66.22:0,66,989	1/1:3,29:32:87.22:1070,87,0	0/0:21,0:21:60.18:0,60,859	1/1:1,14:15:45.14:570,45,0	1/1:0,12:12:33.11:428,33,0	0/0:17,0:17:51.16:0,51,741	1/1:0,21:21:54.18:701,54,0	1/1:0,27:27:72.19:915,72,0	0/0:19,0:19:48.15:0,48,700	1/1:1,22:23:18.23:734,18,0	0/0:30,0:30:87.29:0,87,1304	1/1:0,17:17:36.11:467,36,0	1/1:0,14:14:42.12:519,42,0	1/1:0,15:15:42.14:545,42,0	1/1:0,26:26:66.21:857,66,0	1/1:0,14:14:36.12:467,36,0	0/0:13,0:13:39.13:0,39,583	0/0:20,0:20:60.19:0,60,879	1/1:0,11:11:27.09:351,27,0	1/1:0,15:15:45.15:584,45,0	1/1:0,26:26:72.23:934,72,0	1/1:0,17:17:48.16:622,48,0
chr10	33956186	.	AGACCC	A	1613.11	PASS	AB=0.978;AC=24;AF=0.429;AN=56;BaseQRankSum=-0.879;DP=339;FS=45.654;HRun=0;HaplotypeScore=78.5853;InbreedingCoeff=-0.2001;MQ=36.23;MQ0=7;MQRankSum=-0.229;QD=6.33;ReadPosRankSum=-3.100;VQSLOD=-0.5088;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:12,0:12:61.98:73,0,62	0/0:8,0:8:22.26:0,22,230	0/0:5,0:2:2.97:0,3,37	0/0:8,0:2:5.23:0,5,47	1/1:28,0:27:7.28:473,7,0	0/1:14,1:15:2.28:230,0,2	1/1:9,0:8:2.60:156,3,0	0/1:10,1:10:76.51:93,0,77	1/1:10,1:11:6.02:123,6,0	0/1:12,0:11:91.72:93,0,92	0/1:15,1:17:21.28:21,0,290	0/1:12,0:12:23.23:23,0,297	0/1:8,0:8:11.74:12,0,121	0/1:7,0:7:32.02:32,0,45	0/1:11,0:11:0.61:1,0,280	0/1:9,0:9:24.95:25,0,138	1/1:28,0:27:28.07:345,28,0	0/1:10,0:8:24.46:24,0,103	0/0:10,1:11:0.81:0,1,141	0/0:21,0:21:9.70:0,10,521	0/1:6,0:5:7.55:13,0,8	0/1:11,0:11:10.28:10,0,203	0/0:13,0:12:25.68:0,26,374	0/0:4,0:4:8.99:0,9,112	0/1:9,2:10:11.83:12,0,190	0/1:17,0:17:5.67:6,0,325	0/1:10,0:10:5.05:5,0,84	0/0:14,0:14:5.45:0,5,269
chr10	33956190	.	CCA	C	743.46	PASS	AB=0.942;AC=20;AF=0.357;AN=56;BaseQRankSum=3.418;DP=345;FS=36.561;HRun=0;HaplotypeScore=68.5025;InbreedingCoeff=0.2844;MQ=36.29;MQ0=4;MQRankSum=-1.546;QD=4.20;ReadPosRankSum=-2.344;VQSLOD=0.3867;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:4:5.60:27,6,0	0/1:8,1:9:14.17:14,0,93	0/0:6,0:2:2.04:0,2,6	0/1:10,0:2:0.29:1,0,0	1/1:27,2:28:63.36:360,63,0	1/1:14,0:14:17.77:137,18,0	1/1:9,0:8:17.11:107,17,0	0/1:11,0:12:4.79:5,0,80	1/1:11,0:11:5.27:24,5,0	0/0:13,0:12:13.03:0,13,117	0/0:18,0:18:1.69:0,2,180	0/0:11,0:11:21.75:0,22,199	0/0:8,0:8:8.64:0,9,54	0/1:7,1:8:11.23:11,0,37	0/1:11,1:12:18:18,0,133	0/1:9,0:10:2.29:2,0,142	1/1:28,0:27:17.54:153,18,0	0/1:10,1:9:25.85:26,0,48	0/0:14,0:13:21.75:0,22,133	0/0:22,0:22:33.03:0,33,401	0/0:4,0:4:2.16:0,2,14	0/0:11,0:11:0.38:0,0,130	0/0:13,0:14:20.27:0,20,208	0/0:3,0:3:5.20:0,5,28	0/0:12,0:11:19.64:0,20,153	0/0:18,0:18:41.07:0,41,268	0/1:10,0:10:27.63:28,0,47	0/0:13,1:14:2.89:0,3,160
chr10	33956829	.	GCCTAACA	G	19419.55	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=18.866;DP=630;FS=12.719;HRun=0;HaplotypeScore=170.0929;InbreedingCoeff=0.9876;MQ=83.56;MQ0=0;MQRankSum=-18.057;QD=64.52;ReadPosRankSum=-0.158;VQSLOD=3.7966;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,144,5448	1/1:0,12:12:36.12:948,36,0	0/0:21,0:21:63.22:0,63,2350	0/0:27,0:27:75.22:0,75,2656	0/0:32,0:32:93.30:0,93,3281	0/0:29,0:29:84.26:0,84,3198	0/0:21,0:21:63.19:0,63,2305	1/1:0,13:13:39.09:915,39,0	0/0:30,0:30:87.30:0,87,3371	1/1:0,20:20:60.21:1504,60,0	1/1:1,28:29:72.25:1805,72,0	0/0:16,0:16:45.15:0,45,1716	1/1:1,17:19:42.14:1100,42,0	1/1:0,18:18:51.17:1275,51,0	0/0:28,0:28:84.29:0,84,3316	1/1:2,19:21:48.16:1236,48,0	0/0:25,0:25:75.26:0,75,2894	1/1:0,15:15:42.10:1019,42,0	1/1:0,23:23:66.06:1330,66,0	1/1:1,28:29:78.20:1917,78,0	1/1:2,8:10:9.03:237,9,0	1/1:0,37:37:99:2393,99,0	0/0:33,0:33:96.33:0,96,3734	0/0:17,0:17:51.18:0,51,1955	1/1:0,16:16:42.14:1085,42,0	1/1:1,14:16:45.10:1020,45,0	1/1:0,19:19:51.18:1319,51,0	1/1:0,4:4:12.04:316,12,0
chr10	33956990	.	T	TC	22013.93	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-9.984;DP=620;FS=6.862;HRun=1;HaplotypeScore=58.0244;InbreedingCoeff=0.9988;MQ=87.17;MQ0=0;MQRankSum=-8.713;QD=40.92;ReadPosRankSum=3.035;VQSLOD=5.3702;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,38:40:99:1560,105,0	1/1:0,8:8:24.08:359,24,0	0/0:22,0:22:56.84:0,57,689	0/0:26,0:26:57.14:0,57,687	1/1:0,24:24:66.22:989,66,0	1/1:0,27:27:78.26:1169,78,0	1/1:1,18:19:51.17:764,51,0	1/1:0,39:39:99:1661,114,0	1/1:1,22:23:63.21:944,63,0	1/1:1,20:21:60.20:899,60,0	1/1:0,15:15:42.10:604,42,0	1/1:0,11:11:33.11:494,33,0	1/1:0,11:11:33.11:494,33,0	1/1:0,20:20:57.19:854,57,0	0/0:34,0:34:99:0,99,1268	1/1:1,20:21:60.20:899,60,0	1/1:0,38:38:99:1708,114,0	1/1:1,12:13:30.10:450,30,0	1/1:2,24:26:72.24:1063,72,0	1/1:0,24:24:69.23:1032,69,0	1/1:1,25:26:69.23:1034,69,0	1/1:0,14:14:39.13:585,39,0	1/1:0,20:20:54.18:809,54,0	1/1:0,18:18:48.16:719,48,0	1/1:3,22:25:51.17:763,51,0	1/1:1,19:20:54.16:765,54,0	1/1:2,21:23:57.19:854,57,0	1/1:0,12:12:36.12:540,36,0
chr10	33957209	.	G	GGA	1665.31	PASS	AB=0.566;AC=17;AF=0.304;AN=56;BaseQRankSum=10.512;DP=552;FS=18.247;HRun=0;HaplotypeScore=134.0199;InbreedingCoeff=-0.1144;MQ=72.83;MQ0=0;MQRankSum=-3.103;QD=5.06;ReadPosRankSum=2.509;VQSLOD=1.9237;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:10,0:52:99:593,0,131	1/1:0,0:5:2.60:28,3,0	0/0:23,0:23:57.93:0,58,618	0/0:9,0:10:12.22:0,12,193	0/1:5,0:31:56.33:311,0,56	0/1:3,1:24:17.43:123,0,17	1/1:2,0:15:7.73:214,8,0	0/1:12,0:27:9.56:10,0,202	0/1:1,0:13:2.55:123,0,3	0/1:6,0:21:39.82:40,0,147	0/0:6,0:21:17.14:0,17,134	0/0:8,0:8:24.05:0,24,341	0/1:6,0:18:77.67:78,0,96	0/0:5,0:22:1.43:0,1,77	0/0:22,0:22:66.21:0,66,1027	0/1:6,0:20:3.45:3,0,168	0/1:2,0:16:22.23:241,0,22	0/0:2,0:11:6.56:0,7,69	0/0:7,0:12:12.13:0,12,88	0/1:7,0:35:19.82:20,0,142	0/0:8,0:15:14.54:0,15,151	0/1:6,0:17:12.74:13,0,155	0/0:24,0:24:66.21:0,66,1047	0/0:25,0:25:75.22:0,75,1166	0/1:5,0:19:21.86:22,0,119	0/0:4,0:19:15.52:0,16,141	0/1:1,0:15:1.52:2,0,35	0/0:2,0:11:7.98:0,8,66
chr10	33957378	.	GCACACA	G	2653.21	PASS	AB=0.909;AC=28;AF=0.560;AN=50;BaseQRankSum=4.276;DP=587;FS=5.883;HRun=0;HaplotypeScore=178.7945;InbreedingCoeff=0.6291;MQ=46.50;MQ0=16;MQRankSum=-7.250;QD=9.72;ReadPosRankSum=0.113;VQSLOD=2.3234;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:36:42.12:0,42,986	1/1:6,0:8:3.48:48,3,0	./.	./.	0/0:11,0:23:7.58:0,8,131	0/0:15,0:20:16.78:0,17,241	0/0:10,0:16:11.28:0,11,174	0/1:35,0:32:29.11:133,0,29	0/0:15,0:21:8.89:0,9,98	1/1:18,8:28:37.38:639,37,0	1/1:6,9:17:3.48:63,3,0	0/0:18,0:21:38.32:0,38,852	1/1:11,2:15:5.99:83,6,0	1/1:10,5:17:6.02:91,6,0	0/0:10,0:26:49.46:0,49,659	1/1:7,7:16:12.92:213,13,0	0/0:16,0:23:28.46:0,28,304	0/1:7,2:7:53.23:53,0,70	1/1:6,4:10:12.50:229,13,0	1/1:11,8:20:2.88:54,3,0	1/1:15,1:16:3.01:49,3,0	1/1:6,3:10:3.01:32,3,0	0/0:25,0:26:57.18:0,57,1620	0/0:20,0:24:36.10:0,36,905	1/1:10,11:21:8.02:154,8,0	1/1:18,8:27:32.22:582,32,0	1/1:7,10:16:21.06:415,21,0	./.
chr10	33957417	.	AGATAGAT	A	2506.58	PASS	AB=1.000;AC=21;AF=0.389;AN=54;BaseQRankSum=3.198;DP=646;FS=8.740;HRun=0;HaplotypeScore=258.6892;InbreedingCoeff=0.0264;MQ=37.31;MQ0=25;MQRankSum=-8.860;QD=6.49;ReadPosRankSum=0.497;VQSLOD=0.3925;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:36,0:36:99:126,0,1055	1/1:10,0:10:1.71:7,2,0	./.	0/0:19,0:1:3:0,3,26	1/1:10,16:24:5.87:90,6,0	0/0:16,0:15:11.76:0,12,82	0/0:17,0:16:5.65:0,6,41	0/1:45,0:42:99:500,0,442	0/0:25,0:24:29.54:0,30,202	0/1:37,0:36:99:484,0,644	0/1:27,0:27:0.73:1,0,2	0/0:18,0:18:35.89:0,36,381	1/1:15,0:15:7.14:105,7,0	0/1:25,0:24:14.98:78,0,15	0/0:28,0:28:78.26:0,78,2111	1/1:30,0:25:6.99:151,7,0	0/1:22,0:20:99:107,0,113	0/1:4,0:4:50.01:82,0,50	0/1:12,0:10:91.82:256,0,92	0/0:30,0:27:1.11:0,1,8	0/1:9,0:9:0:0,0,0	0/0:15,0:14:1.27:0,1,5	0/0:26,0:26:54.50:0,54,643	0/0:25,0:25:44.66:0,45,398	1/1:34,0:31:1.40:45,1,0	0/1:32,0:29:99:325,0,357	0/1:22,0:18:59.39:301,0,59	0/0:4,0:3:5.89:0,6,61
chr10	33957421	.	AGAT	A	5159.86	PASS	AB=1.000;AC=39;AF=0.722;AN=54;BaseQRankSum=4.243;DP=644;FS=2.934;HRun=0;HaplotypeScore=224.9344;InbreedingCoeff=0.1277;MQ=37.18;MQ0=24;MQRankSum=-6.747;QD=9.63;ReadPosRankSum=-0.690;VQSLOD=4.5628;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:35,0:35:99:127,0,271	1/1:10,0:10:2.90:46,3,0	./.	0/0:19,0:1:3:0,3,26	1/1:25,0:23:5.78:70,6,0	1/1:6,10:15:11.87:200,12,0	1/1:6,12:17:6.02:100,6,0	1/1:49,0:45:87.96:1052,88,0	1/1:6,19:24:29.36:499,29,0	0/1:37,0:36:92.76:657,0,93	0/1:27,0:27:0.98:1,0,1	0/1:17,0:17:7.75:8,0,181	1/1:15,0:15:11.11:160,11,0	1/1:26,0:25:6.80:115,7,0	0/0:28,0:28:78.26:0,78,1428	1/1:29,0:24:16.64:243,17,0	1/1:7,12:18:30.10:487,30,0	0/1:4,0:4:9.08:83,0,9	0/1:12,0:10:8.56:276,0,9	1/1:30,0:27:1.87:25,2,0	0/1:9,0:9:0:0,0,0	1/1:16,0:15:2.41:24,2,0	0/0:25,0:25:29.13:0,29,539	0/1:24,0:24:24.29:24,0,136	1/1:34,0:31:2.03:46,2,0	0/1:33,0:31:21.38:528,0,21	1/1:22,0:18:27.72:363,28,0	1/1:4,0:3:3.94:26,4,0
chr10	33957424	.	T	TA	7822.67	PASS	AB=0.505;AC=42;AF=0.750;AN=56;BaseQRankSum=0.924;DP=621;FS=2.336;HRun=1;HaplotypeScore=208.2149;InbreedingCoeff=0.6557;MQ=37.16;MQ0=18;MQRankSum=-8.855;QD=16.30;ReadPosRankSum=-3.005;VQSLOD=3.8935;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,32:34:57.66:905,58,0	1/1:1,10:11:2.71:48,3,0	0/0:32,0:2:3.01:0,3,33	0/0:19,0:1:3:0,3,26	1/1:19,6:23:5.87:70,6,0	1/1:10,4:13:6.05:16,6,0	1/1:13,3:15:5.60:17,6,0	1/1:3,43:42:99:1907,123,0	1/1:21,6:26:16.31:64,16,0	1/1:1,33:33:93.32:1466,93,0	0/1:1,25:26:0.70:1,0,2	0/0:7,0:16:35.99:0,36,377	1/1:1,13:14:11.50:184,12,0	1/1:2,22:23:7.47:133,7,0	0/0:28,0:28:78.26:0,78,1090	1/1:3,27:25:16.61:281,17,0	1/1:14,4:17:22.93:213,23,0	1/1:0,4:4:9.03:142,9,0	1/1:5,11:14:18.78:443,19,0	1/1:0,29:26:2.45:49,2,0	0/1:0,6:6:0:0,0,0	1/1:5,12:16:2.82:48,3,0	0/0:15,0:24:54.96:0,55,651	0/0:10,0:22:44.73:0,45,435	1/1:1,29:27:2.43:48,2,0	1/1:3,29:30:75.20:1146,75,0	1/1:2,22:20:35.46:505,35,0	1/1:0,3:3:9.03:137,9,0
chr10	33957470	.	TATACATACATACATACATAC	T	5407.71	PASS	AB=0.867;AC=29;AF=0.518;AN=56;BaseQRankSum=6.398;DP=636;FS=4.779;HRun=0;HaplotypeScore=336.3821;InbreedingCoeff=0.8006;MQ=42.20;MQ0=15;MQRankSum=-6.451;QD=16.74;ReadPosRankSum=-5.020;VQSLOD=2.1801;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:45.11:0,45,3004	1/1:6,3:9:11.42:111,11,0	0/0:33,0:14:12.51:0,13,301	0/0:29,0:12:24.08:0,24,747	0/0:32,0:30:45.15:0,45,2804	0/0:13,0:12:12.04:0,12,871	0/0:19,0:19:33.11:0,33,1885	1/1:29,12:37:35.98:525,36,0	0/0:36,0:35:51.18:0,51,3210	1/1:21,2:22:18.06:854,18,0	1/1:19,5:24:15.84:141,16,0	0/0:8,0:21:36.12:0,36,808	1/1:12,4:16:16.39:363,16,0	1/1:12,12:24:12.78:103,13,0	0/0:14,0:23:33.57:0,34,1761	1/1:19,8:22:25.11:260,25,0	0/0:18,0:18:30.10:0,30,1920	1/1:3,0:3:3.01:123,3,0	1/1:13,1:13:9.01:326,9,0	1/1:25,4:25:15.49:162,15,0	0/0:3,0:3:0:0,0,0	1/1:8,14:21:8.12:111,8,0	0/0:9,0:31:36.36:0,36,860	0/0:16,0:17:6:0,6,95	1/1:22,7:28:38.42:348,38,0	0/1:22,4:23:15.19:867,0,15	1/1:11,8:17:26.28:954,26,0	1/1:3,14:17:2.33:159,2,0
chr10	33957481	.	ACAT	A	1676.53	PASS	AB=0.985;AC=21;AF=0.375;AN=56;BaseQRankSum=9.455;DP=637;FS=28.261;HRun=0;HaplotypeScore=234.8186;InbreedingCoeff=0.1701;MQ=42.56;MQ0=15;MQRankSum=-3.883;QD=4.99;ReadPosRankSum=-2.614;VQSLOD=1.2646;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:63.21:0,63,1226	0/1:10,0:10:6.28:73,0,6	0/0:23,0:13:38.86:0,39,463	0/0:30,0:15:45.14:0,45,564	0/0:32,0:30:51.17:0,51,1208	0/0:17,0:16:33.03:0,33,591	0/0:20,0:20:33.98:0,34,718	0/1:31,0:26:32.01:32,0,552	0/0:37,0:36:71.99:0,72,1385	0/1:23,1:23:99:273,0,438	1/1:25,4:29:11.24:130,11,0	0/0:17,0:17:41.92:0,42,512	0/1:16,1:17:34.71:171,0,35	1/1:23,1:24:1.11:18,1,0	0/0:27,0:27:63.21:0,63,983	0/1:26,1:25:28.62:141,0,29	0/0:21,0:21:55.43:0,55,984	0/1:3,0:3:32.87:39,0,33	0/1:13,0:10:63.57:64,0,240	1/1:31,1:29:17.13:194,17,0	0/1:6,0:6:0:0,0,0	1/1:22,0:21:8.89:60,9,0	0/0:29,0:29:39.17:0,39,503	0/0:18,0:18:30.01:0,30,376	1/1:30,3:32:17.62:145,18,0	0/1:27,1:25:99:299,0,293	0/1:20,0:17:99:193,0,158	0/1:17,0:17:22.40:22,0,33
chr10	33957769	.	C	CAAAAAAA	5963.80	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=5.858;DP=616;FS=0.000;HRun=8;HaplotypeScore=157.3483;InbreedingCoeff=0.9949;MQ=78.00;MQ0=0;MQRankSum=-11.461;QD=45.18;ReadPosRankSum=-5.247;VQSLOD=0.3031;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:18,7:28:33.11:958,33,0	0/0:10,0:10:24.02:0,24,500	0/0:24,0:24:57.13:0,57,1113	0/0:12,0:11:13.95:0,14,345	1/1:16,4:22:36.07:898,36,0	1/1:15,8:24:27.09:864,27,0	1/1:11,9:21:36.12:1176,36,0	0/0:36,0:36:90.19:0,90,1769	1/1:14,7:21:39.13:1251,39,0	0/0:29,0:29:76.42:0,76,1492	0/0:23,0:23:60.17:0,60,1217	0/0:16,0:16:39.06:0,39,819	0/0:23,0:23:54.13:0,54,1119	0/0:19,0:19:54.16:0,54,1099	0/0:22,0:22:63.14:0,63,1208	0/0:21,0:22:66.23:0,66,1358	1/1:10,5:16:28.38:816,28,0	0/0:16,0:16:45.12:0,45,940	0/0:17,0:17:48.13:0,48,982	0/0:18,0:18:39.02:0,39,819	0/0:20,0:20:49.05:0,49,1015	0/0:20,0:20:36:0,36,741	0/0:31,0:31:81.15:0,81,1643	0/0:24,0:24:66.16:0,66,1343	0/0:27,0:27:66.13:0,66,1344	0/0:20,0:20:48.08:0,48,1008	0/0:34,0:34:90.27:0,90,1887	0/0:21,0:21:54.08:0,54,1109
chr10	33958076	.	TTG	T	2912.46	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=13.026;DP=585;FS=5.286;HRun=0;HaplotypeScore=108.9430;InbreedingCoeff=0.9484;MQ=60.99;MQ0=1;MQRankSum=-1.005;QD=9.16;ReadPosRankSum=-1.181;VQSLOD=2.6448;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,117,1934	1/1:8,1:9:18.25:103,18,0	0/0:22,0:18:37.75:0,38,675	0/0:15,0:14:4.03:0,4,398	0/0:15,0:15:39.11:0,39,621	0/0:19,0:19:54.16:0,54,871	0/0:21,0:21:63.19:0,63,1013	1/1:22,1:23:47.80:220,48,0	0/0:28,0:28:81.25:0,81,1368	1/1:23,1:24:62.71:302,63,0	1/1:19,1:20:30.17:249,30,0	0/0:8,0:8:24.07:0,24,377	1/1:17,0:17:7.65:124,8,0	1/1:22,0:22:38.24:182,38,0	0/0:16,0:16:48.13:0,48,763	1/1:18,2:20:37.70:310,38,0	0/0:29,0:28:66.31:0,66,1327	1/1:22,0:22:19.19:123,19,0	1/1:15,2:17:10.78:217,11,0	1/1:19,1:20:47.22:221,47,0	1/1:21,1:22:49.74:223,50,0	1/1:16,0:16:8.08:103,8,0	0/0:24,0:24:72.23:0,72,1202	0/0:31,0:31:93.32:0,93,1582	1/1:24,1:25:52.04:231,52,0	1/1:24,1:25:24.31:318,24,0	1/1:30,0:30:26.57:152,27,0	1/1:6,0:6:15.28:58,15,0
chr10	33958077	.	TG	T	10273.14	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=1.390;DP=583;FS=3.130;HRun=1;HaplotypeScore=73.3152;InbreedingCoeff=0.9821;MQ=61.03;MQ0=1;MQRankSum=-3.156;QD=32.41;ReadPosRankSum=-1.542;VQSLOD=4.1815;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,117,1530	1/1:1,8:9:21.02:270,21,0	0/0:21,0:17:37.57:0,38,497	0/0:16,0:15:5.64:0,6,320	0/0:14,0:14:39.04:0,39,484	0/0:19,0:19:57.10:0,57,690	0/0:21,0:21:63.04:0,63,795	1/1:1,21:22:56.67:724,57,0	0/0:27,0:27:81.25:0,81,1079	1/1:1,23:24:72.04:904,72,0	1/1:8,12:20:49.12:644,49,0	0/0:8,0:8:24.05:0,24,295	1/1:7,10:17:41.31:580,41,0	1/1:3,19:22:58.61:818,59,0	0/0:16,0:16:48.11:0,48,604	1/1:7,13:20:55.51:691,56,0	0/0:30,0:29:69.64:0,70,1056	1/1:2,20:22:29.01:569,29,0	1/1:10,8:18:43.08:501,43,0	1/1:1,19:20:54.11:707,54,0	1/1:1,21:22:57.16:774,57,0	1/1:1,15:16:29.01:423,29,0	0/0:24,0:24:72.20:0,72,944	0/0:31,0:31:93.27:0,93,1230	1/1:1,24:25:60.17:813,60,0	1/1:11,14:25:57.40:801,57,0	1/1:2,27:29:57.28:804,57,0	1/1:0,6:6:18.06:250,18,0
chr10	33968120	.	AC	A	396.64	PASS	AC=12;AF=1.000;AN=12;DP=87;FS=0.000;HRun=2;HaplotypeScore=7.2846;MQ=20.21;MQ0=23;QD=13.22;VQSLOD=2.2642;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,11:9:9.03:116,9,0	./.	./.	./.	1/1:0,1:1:3.01:39,3,0	./.	1/1:2,7:4:9.03:117,9,0	./.	1/1:0,3:2:6.02:78,6,0	./.	./.	./.	1/1:0,2:2:6.02:78,6,0	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	1/1:0,1:1:3.01:39,3,0	./.	./.	./.	./.
chr10	33979722	.	T	TAC	10866.49	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=9.982;DP=696;FS=1.692;HRun=0;HaplotypeScore=182.2732;InbreedingCoeff=0.9955;MQ=51.13;MQ0=11;MQRankSum=-6.211;QD=29.29;ReadPosRankSum=2.005;VQSLOD=6.1969;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:74.81:0,75,919	1/1:3,5:8:18.04:275,18,0	0/0:65,0:26:50.95:0,51,573	0/0:64,0:32:61.58:0,62,727	0/0:24,0:24:63.18:0,63,781	0/0:25,0:24:48.16:0,48,616	0/0:15,0:15:33.07:0,33,396	1/1:11,22:32:72.22:1121,72,0	0/0:19,0:19:45.11:0,45,560	1/1:6,18:24:57.19:924,57,0	1/1:7,17:25:39.13:643,39,0	0/0:17,0:17:42.14:0,42,540	1/1:8,23:31:54.18:890,54,0	1/1:7,14:21:42.13:665,42,0	1/1:7,13:20:33.11:542,33,0	1/1:2,12:14:33.11:526,33,0	0/0:25,0:25:54.14:0,54,694	1/1:1,8:9:21.07:330,21,0	1/1:4,10:14:36.12:557,36,0	1/1:9,25:34:54.18:907,54,0	1/1:11,25:36:33.11:529,33,0	1/1:9,14:23:36.12:572,36,0	0/0:12,0:12:27.09:0,27,347	0/0:21,0:20:38.90:0,39,466	1/1:8,13:21:39.13:642,39,0	1/1:9,11:20:45.08:683,45,0	1/1:12,16:28:53.83:820,54,0	1/1:5,4:9:14.84:240,15,0
chr10	33979767	.	GTA	G	5201.34	PASS	AB=0.875;AC=34;AF=0.607;AN=56;BaseQRankSum=6.262;DP=449;FS=1.590;HRun=0;HaplotypeScore=186.0927;InbreedingCoeff=0.8356;MQ=46.31;MQ0=3;MQRankSum=-8.782;QD=18.12;ReadPosRankSum=-4.247;VQSLOD=3.9514;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:27:46.28:0,46,426	1/1:4,4:8:6.02:67,6,0	0/0:5,0:1:2.97:0,3,20	0/1:7,0:3:13.96:14,0,28	0/0:4,0:20:46.38:0,46,403	0/0:5,0:14:24.03:0,24,260	0/0:4,0:9:17.93:0,18,148	1/1:13,15:27:75.23:920,75,0	0/0:5,0:14:33.01:0,33,335	1/1:7,6:13:21.02:227,21,0	1/1:6,11:18:12.03:147,12,0	0/0:14,0:14:17.86:0,18,71	1/1:3,15:18:30.08:336,30,0	1/1:1,21:22:41.78:438,42,0	1/1:5,9:14:18.05:204,18,0	1/1:3,6:9:18.05:202,18,0	0/0:9,0:26:42.02:0,42,397	1/1:2,5:7:14.98:163,15,0	1/1:10,7:17:33.09:389,33,0	1/1:7,23:30:39.11:456,39,0	0/1:8,4:12:0:0,0,0	1/1:1,12:12:9.02:100,9,0	0/0:13,0:13:14.54:0,15,112	0/0:18,0:17:17.58:0,18,106	1/1:0,23:23:33.09:372,33,0	1/1:8,12:20:46.49:474,46,0	1/1:4,18:22:45.12:523,45,0	1/1:1,5:6:15.04:169,15,0
chr10	33979802	.	C	CAT	292.13	PASS	AB=0.974;AC=14;AF=0.250;AN=56;BaseQRankSum=4.392;DP=588;FS=2.647;HRun=0;HaplotypeScore=229.9139;InbreedingCoeff=-0.2021;MQ=42.59;MQ0=24;MQRankSum=-2.706;QD=1.09;ReadPosRankSum=-2.790;VQSLOD=2.1776;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:59.70:0,60,786	0/1:9,0:9:15.34:18,0,15	0/0:34,0:14:36.05:0,36,486	0/0:29,0:13:39.02:0,39,547	0/0:18,0:18:34.04:0,34,543	0/0:12,0:12:23.97:0,24,319	0/0:8,0:8:19.16:0,19,216	0/0:36,0:36:99:0,102,1421	0/0:15,0:15:26.24:0,26,310	0/1:21,0:19:39.98:40,0,364	0/1:25,2:27:68.91:69,0,143	0/0:11,0:11:8.06:0,8,96	0/1:17,0:17:15.95:16,0,66	0/1:24,1:25:1.23:1,0,44	0/1:17,2:19:36.61:37,0,40	0/0:14,1:15:4.26:0,4,49	0/0:35,0:34:49.76:0,50,687	0/0:4,0:4:9.03:0,9,122	0/0:18,0:18:42.48:0,42,570	0/0:27,1:28:6.51:0,7,195	1/1:20,0:19:3.01:43,3,0	0/0:25,0:23:3.85:0,4,11	0/1:15,0:15:24.82:25,0,192	0/1:26,0:26:13.62:14,0,312	0/1:30,1:30:59.65:62,0,60	0/1:28,0:28:31.45:31,0,617	0/1:22,2:24:56.38:56,0,458	0/1:5,0:5:28.02:28,0,138
chr10	33979808	.	T	TAC	2048.58	PASS	AB=0.947;AC=44;AF=0.846;AN=52;BaseQRankSum=0.105;DP=613;FS=0.000;HRun=0;HaplotypeScore=218.2746;InbreedingCoeff=-0.0673;MQ=42.39;MQ0=26;MQRankSum=0.659;QD=3.99;ReadPosRankSum=-1.893;VQSLOD=2.5706;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:35:6.10:0,6,49	1/1:9,0:9:3.48:30,3,0	./.	./.	1/1:14,2:17:0.97:162,1,0	0/1:13,0:13:25.42:41,0,25	1/1:9,1:10:11.99:134,12,0	1/1:35,0:35:7.18:26,7,0	0/1:14,4:18:11.78:222,0,12	1/1:23,0:21:3.18:97,3,0	0/1:28,0:28:9.38:95,0,9	1/1:11,0:11:6.01:71,6,0	1/1:18,0:18:9.63:59,10,0	1/1:23,0:23:5.83:37,6,0	1/1:18,0:18:3.01:37,3,0	1/1:17,0:17:0.94:2,1,0	0/1:32,5:38:29.84:445,0,30	1/1:7,0:7:3.45:23,3,0	1/1:18,0:18:3.44:21,3,0	1/1:26,0:25:6.46:50,6,0	1/1:24,0:23:2.97:20,3,0	1/1:28,0:26:8.93:82,9,0	1/1:16,0:16:17.99:156,18,0	1/1:28,0:28:11.77:94,12,0	0/1:32,0:31:7.81:63,0,8	1/1:28,0:28:15.80:118,16,0	0/1:23,0:23:10.27:72,0,10	1/1:5,0:5:2.86:19,3,0
chr10	33979847	.	A	ACACC	8290.11	PASS	AB=1.000;AC=44;AF=0.786;AN=56;BaseQRankSum=4.934;DP=603;FS=0.000;HRun=0;HaplotypeScore=196.0667;InbreedingCoeff=0.4768;MQ=57.95;MQ0=7;MQRankSum=-6.800;QD=16.26;ReadPosRankSum=-1.054;VQSLOD=4.2068;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:98.70:0,99,838	1/1:11,0:11:21.01:233,21,0	0/0:25,0:12:36.01:0,36,369	0/0:31,0:22:49.21:0,49,528	0/1:13,0:13:99:108,0,116	0/1:22,0:21:0.59:1,0,320	0/1:19,0:19:6.64:7,0,236	1/1:20,0:20:56.19:463,56,0	0/1:12,0:12:30.18:30,0,95	1/1:18,0:18:39.38:409,39,0	1/1:27,0:28:38.78:412,39,0	1/1:10,1:12:24:291,24,0	1/1:28,1:29:64.77:585,65,0	1/1:21,0:21:32.77:329,33,0	1/1:11,0:12:25.44:207,25,0	1/1:16,0:15:26.91:265,27,0	0/1:38,0:38:83.99:84,0,342	0/1:7,0:7:1.03:138,0,1	1/1:15,0:14:38.83:338,39,0	1/1:25,0:25:50.81:490,51,0	1/1:26,0:26:50.37:423,50,0	1/1:26,0:24:10.24:283,10,0	1/1:17,2:20:38.87:596,39,0	1/1:32,0:33:53.75:621,54,0	1/1:30,0:29:52.21:551,52,0	1/1:25,0:25:65.61:680,66,0	1/1:24,1:25:55.56:544,56,0	1/1:7,0:7:20.92:203,21,0
chr10	33979989	.	C	CAA	26316.29	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=0.535;DP=619;FS=0.000;HRun=3;HaplotypeScore=97.6294;InbreedingCoeff=0.9982;MQ=90.64;MQ0=3;MQRankSum=-10.727;QD=46.33;ReadPosRankSum=5.906;VQSLOD=3.9180;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,35:37:96.33:1760,96,0	1/1:1,8:9:24.08:440,24,0	0/0:26,0:26:55.93:0,56,781	0/0:25,0:25:65.58:0,66,870	1/1:0,18:18:54.11:898,54,0	1/1:0,11:11:30.10:550,30,0	1/1:3,27:30:69.24:1266,69,0	1/1:3,26:30:81.26:1420,81,0	1/1:2,17:20:45.15:825,45,0	1/1:3,22:26:63.18:1117,63,0	1/1:1,16:17:45.15:825,45,0	1/1:1,14:15:36.12:660,36,0	1/1:1,25:26:59.91:1098,60,0	1/1:1,18:19:54.18:977,54,0	1/1:1,19:20:51.17:935,51,0	1/1:0,18:17:39.13:715,39,0	1/1:1,25:26:63.22:1155,63,0	1/1:2,22:24:63.17:1120,63,0	1/1:2,20:22:60.21:1093,60,0	1/1:3,18:22:57.15:1002,57,0	1/1:3,20:23:60.21:1100,60,0	1/1:2,20:22:57.20:1037,57,0	1/1:1,17:18:45.15:825,45,0	1/1:0,37:37:99:1815,99,0	1/1:1,24:25:66.23:1210,66,0	1/1:1,13:14:36.12:660,36,0	1/1:3,22:24:72.20:1263,72,0	1/1:0,11:11:30.10:550,30,0
chr10	33981027	.	ACACAGTATT	A	5746.47	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=13.101;DP=540;FS=1.517;HRun=0;HaplotypeScore=161.9820;InbreedingCoeff=0.9991;MQ=82.58;MQ0=0;MQRankSum=-11.651;QD=54.73;ReadPosRankSum=1.406;VQSLOD=4.9705;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,17:24:39.13:968,39,0	0/0:12,0:12:33.10:0,33,1471	0/0:18,0:18:45.15:0,45,1972	0/0:23,0:23:63.22:0,63,2686	1/1:5,11:16:30.10:769,30,0	1/1:4,18:22:60.21:1563,60,0	1/1:4,9:13:30.10:770,30,0	0/0:23,0:23:66.22:0,66,2954	1/1:4,12:16:39.13:1035,39,0	0/0:24,0:24:69.24:0,69,3272	0/0:26,0:26:75.26:0,75,3516	0/0:12,0:12:33.11:0,33,1561	0/0:24,0:24:72.23:0,72,3274	0/0:16,0:16:48.16:0,48,2321	0/0:21,0:21:63.22:0,63,3061	0/0:24,0:24:72.25:0,72,3519	1/1:3,11:14:24.08:641,24,0	0/0:14,0:14:42.14:0,42,2083	0/0:25,0:25:75.26:0,75,3654	0/0:26,0:26:75.21:0,75,3412	0/0:31,0:31:93.32:0,93,4338	0/0:12,0:12:30.06:0,30,1259	0/0:18,0:17:39.05:0,39,1634	0/0:16,0:16:48.12:0,48,2254	0/0:15,0:15:45.13:0,45,1895	0/0:25,0:25:72.25:0,72,3450	0/0:19,0:19:57.20:0,57,2826	0/0:11,0:11:33.11:0,33,1635
chr10	33981038	.	T	TG	1963.94	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=13.719;DP=534;FS=2.100;HRun=3;HaplotypeScore=92.0452;InbreedingCoeff=0.9990;MQ=83.72;MQ0=0;MQRankSum=-12.182;QD=20.25;ReadPosRankSum=0.545;VQSLOD=3.2554;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,21:23:45.04:455,45,0	0/0:11,0:11:30.09:0,30,359	0/0:20,0:20:51.02:0,51,599	0/0:26,0:26:63.19:0,63,742	1/1:4,12:16:29.97:257,30,0	1/1:1,18:19:57.07:530,57,0	1/1:4,9:13:30.03:284,30,0	0/0:26,0:26:69.21:0,69,828	1/1:0,13:13:39.02:367,39,0	0/0:24,0:24:72.22:0,72,864	0/0:25,0:25:60.16:0,60,697	0/0:11,0:11:33.10:0,33,396	0/0:23,0:23:63.18:0,63,743	0/0:15,0:15:45.14:0,45,540	0/0:21,0:21:63.19:0,63,756	0/0:23,0:23:60.18:0,60,720	1/1:0,13:13:27.03:260,27,0	0/0:12,0:12:36.11:0,36,432	0/0:26,0:26:75.23:0,75,898	0/0:25,0:25:69.21:0,69,827	0/0:31,0:31:93.25:0,93,1090	0/0:11,0:11:33.10:0,33,395	0/0:17,0:16:42.13:0,42,502	0/0:18,0:18:51.16:0,51,612	0/0:12,0:12:30.09:0,30,360	0/0:23,0:23:54.16:0,54,644	0/0:24,0:24:72.21:0,72,851	0/0:13,0:13:27.08:0,27,324
chr10	33981344	.	TAA	T	3696.22	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=2.982;DP=327;FS=3.881;HRun=11;HaplotypeScore=92.9931;InbreedingCoeff=0.8482;MQ=73.84;MQ0=0;MQRankSum=-5.649;QD=18.12;ReadPosRankSum=5.276;VQSLOD=2.7501;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:38.96:0,39,439	1/1:4,4:8:12.02:127,12,0	0/0:34,0:24:41.93:0,42,511	0/0:25,0:18:2.48:0,2,331	0/0:7,0:8:14.59:0,15,139	0/0:2,0:2:3:0,3,28	0/0:8,0:8:14.36:0,14,123	1/1:2,4:6:12.02:128,12,0	0/0:9,0:9:11.96:0,12,122	1/1:2,6:9:21.31:205,21,0	1/1:6,11:20:34.88:354,35,0	1/1:0,6:7:20.84:204,21,0	1/1:0,12:11:26.78:286,27,0	1/1:1,8:8:18.04:191,18,0	1/1:4,7:11:17.83:173,18,0	1/1:1,5:4:9.02:96,9,0	0/0:17,0:17:11.98:0,12,121	1/1:1,3:4:9.02:95,9,0	1/1:9,3:13:12.26:109,12,0	1/1:7,13:21:43.38:430,43,0	1/1:6,3:8:6:63,6,0	1/1:2,7:10:18.03:191,18,0	1/1:4,9:12:21.52:224,22,0	1/1:2,5:8:14.90:142,15,0	1/1:3,11:14:24.05:255,24,0	1/1:4,4:10:17.61:154,18,0	1/1:4,5:10:17.83:172,18,0	1/1:0,3:3:9.02:95,9,0
chr10	33981355	.	A	AAGG	3908.49	PASS	AB=0.618;AC=50;AF=0.893;AN=56;BaseQRankSum=1.697;DP=354;FS=2.406;HRun=0;HaplotypeScore=105.0011;InbreedingCoeff=0.4892;MQ=66.81;MQ0=6;MQRankSum=-5.320;QD=13.86;ReadPosRankSum=5.770;VQSLOD=3.4057;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:10,0:18:14.30:190,0,14	1/1:8,0:7:14.81:105,15,0	0/0:43,0:24:52.64:0,53,568	0/0:26,0:17:12.06:0,12,230	1/1:7,1:10:9.01:106,9,0	1/1:2,3:6:5.98:86,6,0	1/1:2,0:6:12.04:184,12,0	1/1:13,0:13:14.84:117,15,0	1/1:2,2:8:12:185,12,0	1/1:11,0:11:19.75:183,20,0	1/1:21,0:22:40.78:317,41,0	1/1:8,0:8:16.78:136,17,0	1/1:13,0:12:29.55:211,30,0	1/1:12,0:11:20.44:143,20,0	1/1:9,0:8:13.67:112,14,0	1/1:5,0:3:8.84:55,9,0	0/1:3,12:19:7.93:160,0,8	1/1:4,0:4:11.98:116,12,0	1/1:11,0:11:20.01:244,20,0	1/1:20,0:19:42.86:331,43,0	1/1:7,0:6:11.88:106,12,0	1/1:13,0:10:16.54:86,17,0	1/1:13,0:12:26.52:190,27,0	1/1:7,0:7:7.74:71,8,0	1/1:13,0:13:23.31:147,23,0	1/1:9,0:9:9.57:132,10,0	1/1:10,0:9:13.41:125,13,0	1/1:7,0:7:8.95:71,9,0
chr10	33981446	.	CAAA	C	3863.37	PASS	AB=0.603;AC=46;AF=0.821;AN=56;BaseQRankSum=-4.695;DP=343;FS=16.171;HRun=17;HaplotypeScore=65.5152;InbreedingCoeff=0.2521;MQ=49.09;MQ0=20;MQRankSum=-2.299;QD=13.60;ReadPosRankSum=1.301;VQSLOD=0.2240;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,9:16:23.88:233,24,0	1/1:2,6:8:17.80:171,18,0	0/0:27,0:9:17.99:0,18,193	0/0:23,0:5:1.82:0,2,6	0/1:4,10:16:13.36:203,0,13	1/1:1,8:10:23.97:233,24,0	1/1:2,3:3:5.99:62,6,0	1/1:5,4:9:14.90:141,15,0	1/1:1,2:3:8.94:79,9,0	1/1:3,8:12:19.35:186,19,0	0/1:9,10:23:12.57:324,0,13	0/1:3,1:6:6.84:22,0,7	1/1:1,3:4:2.98:31,3,0	1/1:3,3:6:8.94:79,9,0	1/1:2,7:11:20.90:202,21,0	1/1:2,5:7:10.65:120,11,0	1/1:4,8:8:18.04:185,18,0	1/1:3,1:1:3.01:31,3,0	1/1:4,1:6:5.80:48,6,0	1/1:5,10:15:28.52:303,29,0	1/1:3,3:4:6.01:62,6,0	1/1:4,4:9:17.71:155,18,0	0/1:5,2:17:14.65:86,0,15	0/0:3,0:7:1.73:0,2,5	1/1:7,12:18:26.67:276,27,0	1/1:11,8:20:26.53:263,27,0	1/1:8,6:16:34.11:308,34,0	1/1:9,2:7:5.94:62,6,0
chr10	33981547	.	AAGAAGAAAAGAAAGAAAGAAAGAAAGAGAGAG	A	13726.45	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-0.511;DP=339;FS=2.503;HRun=0;HaplotypeScore=259.1021;InbreedingCoeff=0.8730;MQ=65.70;MQ0=2;MQRankSum=0.497;QD=77.99;ReadPosRankSum=4.818;VQSLOD=3.9472;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:81.27:0,81,3605	1/1:1,4:5:6.02:503,6,0	0/0:22,0:13:32.78:0,33,1114	0/0:17,0:14:31.47:0,31,1234	0/0:24,0:24:72.22:0,72,3726	0/0:13,0:13:39.13:0,39,2935	0/0:13,0:12:36.12:0,36,2320	1/1:12,0:12:33.11:789,33,0	0/0:3,0:3:9.03:0,9,883	1/1:1,10:11:21.01:910,21,0	1/1:11,3:14:39.12:1202,39,0	0/0:1,0:1:3.01:0,3,110	1/1:1,6:7:9.03:754,9,0	1/1:0,9:9:9.03:754,9,0	1/1:0,8:8:9.03:754,9,0	1/1:0,6:6:3.01:251,3,0	0/0:13,0:13:36.12:0,36,2126	1/1:7,0:7:18.03:341,18,0	1/1:0,9:9:27:661,27,0	1/1:1,25:26:33.07:1718,33,0	1/1:2,0:2:5.91:52,6,0	1/1:6,2:8:21.07:808,21,0	0/0:22,0:22:39.12:0,39,1232	0/0:8,0:8:18.06:0,18,420	1/1:0,20:20:15.05:1253,15,0	1/1:1,12:13:29.64:831,30,0	1/1:0,15:15:21.07:1760,21,0	1/1:3,1:4:9.03:385,9,0
chr10	33981549	.	GAAGA	G	3467.78	PASS	AB=1.000;AC=39;AF=0.696;AN=56;BaseQRankSum=6.350;DP=335;FS=12.929;HRun=0;HaplotypeScore=140.9207;InbreedingCoeff=0.4239;MQ=64.23;MQ0=2;MQRankSum=-4.053;QD=13.44;ReadPosRankSum=2.017;VQSLOD=2.9266;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:28:19.71:20,0,690	1/1:5,0:5:6.02:65,6,0	0/0:24,0:14:34.34:0,34,604	0/0:16,0:13:30.12:0,30,567	0/1:24,0:24:67.58:68,0,516	0/1:13,0:13:33.23:33,0,325	0/1:13,0:12:58.42:58,0,243	1/1:1,11:12:33.11:467,33,0	0/0:3,0:3:0.21:0,0,81	1/1:10,0:10:15.02:166,15,0	1/1:14,0:14:39.10:469,39,0	0/0:1,0:1:3.01:0,3,56	1/1:7,0:7:9.02:98,9,0	1/1:9,0:9:9.02:98,9,0	1/1:8,0:8:9.02:98,9,0	1/1:6,0:6:3.01:33,3,0	0/0:13,0:13:8.39:0,8,360	1/1:7,0:7:18.03:232,18,0	1/1:9,0:9:15.05:203,15,0	1/1:25,0:25:30.09:345,30,0	1/1:2,0:2:4.26:39,4,0	1/1:7,0:7:21.05:260,21,0	0/0:20,0:20:34.19:0,34,398	0/1:8,0:8:2.95:3,0,155	1/1:20,0:20:15.04:159,15,0	1/1:13,0:13:18.03:219,18,0	1/1:15,0:15:20.99:228,21,0	1/1:3,0:3:9.03:109,9,0
chr10	33981552	.	GAAAA	G	2264.18	PASS	AB=0.941;AC=38;AF=0.679;AN=56;BaseQRankSum=7.317;DP=326;FS=2.646;HRun=4;HaplotypeScore=142.2051;InbreedingCoeff=0.3443;MQ=59.88;MQ0=2;MQRankSum=-3.522;QD=8.58;ReadPosRankSum=3.227;VQSLOD=-0.1179;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:26,2:28:92.82:93,0,384	1/1:4,0:4:6.01:56,6,0	0/0:22,0:11:32.74:0,33,498	0/0:16,0:13:19.33:0,19,422	0/1:21,2:23:99:164,0,274	0/1:12,1:13:35.56:36,0,235	0/1:11,2:12:72.22:72,0,160	1/1:11,0:11:32.69:229,33,0	0/0:3,0:3:6.16:0,6,66	1/1:10,0:10:11.93:108,12,0	1/1:14,0:14:35.32:258,35,0	0/0:1,0:1:3.01:0,3,30	1/1:6,0:6:9.01:84,9,0	1/1:9,0:9:9.01:84,9,0	1/1:8,0:8:9.01:84,9,0	1/1:6,0:6:3:28,3,0	0/0:12,0:12:0.47:0,0,195	1/1:7,0:7:14.72:97,15,0	1/1:9,0:9:14.93:116,15,0	1/1:25,0:25:29.73:237,30,0	0/1:2,0:2:8.60:12,0,9	1/1:7,0:7:20.74:145,21,0	0/1:19,0:19:11.75:12,0,149	0/0:8,0:8:11.01:0,11,97	1/1:20,0:20:15.01:136,15,0	1/1:12,0:12:17.79:131,18,0	1/1:15,0:15:20.89:196,21,0	1/1:3,0:3:8.92:66,9,0
chr10	33981563	.	AAGAAAGAAAGAGAGAG	A	6314.19	PASS	AB=1.000;AC=39;AF=0.696;AN=56;BaseQRankSum=3.531;DP=327;FS=4.471;HRun=0;HaplotypeScore=184.8593;InbreedingCoeff=0.5515;MQ=51.07;MQ0=5;MQRankSum=-1.367;QD=26.76;ReadPosRankSum=2.922;VQSLOD=3.5817;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:30:39.07:39,0,1203	1/1:4,0:4:6.02:228,6,0	0/0:22,0:8:12.25:0,12,839	0/0:15,0:11:13.60:0,14,452	0/0:22,0:22:11.87:0,12,1257	0/0:13,0:13:12.14:0,12,1386	0/0:14,0:13:12.10:0,12,862	0/1:9,0:9:0:0,0,0	0/0:3,0:3:9.03:0,9,394	1/1:10,0:10:14.99:385,15,0	1/1:10,0:10:9.03:343,9,0	1/1:3,0:3:9.03:278,9,0	1/1:6,0:6:9.03:343,9,0	1/1:9,0:9:9.03:343,9,0	1/1:8,0:8:9.03:343,9,0	1/1:6,0:6:3.01:114,3,0	0/1:16,0:16:20.86:21,0,653	0/0:2,0:2:0:0,0,0	1/1:9,0:9:14.77:207,15,0	1/1:25,0:25:21.03:705,21,0	1/1:2,0:2:2.96:19,3,0	1/1:7,0:7:5.70:220,6,0	1/1:5,15:20:18.06:808,18,0	1/1:5,7:12:3.01:127,3,0	1/1:20,0:20:15.05:567,15,0	1/1:12,0:12:17.52:312,18,0	1/1:15,0:15:21.07:799,21,0	1/1:3,0:3:3:114,3,0
chr10	33981568	.	A	AGAAG	1027.85	PASS	AB=0.923;AC=9;AF=0.161;AN=56;BaseQRankSum=-4.974;DP=320;FS=1.557;HRun=0;HaplotypeScore=151.2942;InbreedingCoeff=-0.0300;MQ=46.95;MQ0=7;MQRankSum=-0.990;QD=9.18;ReadPosRankSum=-3.056;VQSLOD=2.6859;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:28,1:29:99:243,0,115	0/0:4,0:4:6.01:0,6,56	0/0:23,0:8:22.04:0,22,275	0/0:16,0:10:18.99:0,19,234	0/1:16,3:19:64.88:227,0,65	0/1:13,2:15:99:194,0,151	0/1:14,0:13:57.31:110,0,57	0/0:8,0:8:0:0,0,1	0/1:2,1:3:10.92:94,0,11	0/0:10,0:10:9.01:0,9,84	0/0:6,0:6:8.43:0,8,81	1/1:3,0:3:8.87:57,9,0	0/0:6,0:6:9.01:0,9,84	0/0:9,0:9:9.01:0,9,84	0/0:8,0:8:9.01:0,9,84	0/0:6,0:6:3:0,3,28	0/1:18,0:18:83.29:226,0,83	0/0:2,0:2:5.62:0,6,28	0/0:9,0:9:3:0,3,29	0/0:25,0:25:18.02:0,18,168	0/0:2,0:2:2.99:0,3,24	0/0:6,0:6:6.43:0,6,48	0/0:18,0:18:4.91:0,5,157	0/1:11,0:11:10.47:10,0,14	0/0:20,0:20:14.98:0,15,132	0/0:12,0:12:5.91:0,6,56	0/0:15,0:15:21.02:0,21,196	0/0:3,0:3:7.30:0,7,44
chr10	33981573	.	G	GAAAGAAAGAA	4020.66	PASS	AB=1.000;AC=15;AF=0.300;AN=50;BaseQRankSum=-7.249;DP=298;FS=5.985;HRun=0;HaplotypeScore=165.6269;InbreedingCoeff=0.6623;MQ=50.39;MQ0=7;MQRankSum=0.287;QD=35.58;ReadPosRankSum=-3.329;VQSLOD=2.5545;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:27,1:30:53.60:895,54,0	0/0:4,0:4:6.02:0,6,116	0/0:23,0:7:13.85:0,14,415	0/0:16,0:9:16.08:0,16,282	1/1:16,3:19:47.99:961,48,0	1/1:15,2:17:45.01:880,45,0	1/1:12,0:11:32.99:527,33,0	./.	1/1:2,1:3:9.03:271,9,0	0/0:10,0:10:9.03:0,9,209	0/0:4,0:4:8.96:0,9,128	0/1:6,0:6:37.87:38,0,47	0/0:6,0:6:9.03:0,9,205	0/0:9,0:9:9.03:0,9,194	0/0:8,0:8:9.03:0,9,191	0/0:6,0:6:3.01:0,3,70	1/1:18,0:18:31.74:444,32,0	./.	0/0:9,0:9:3.01:0,3,70	0/0:25,0:25:18.06:0,18,399	./.	0/0:2,0:2:5.98:0,6,89	0/0:15,0:15:18.02:0,18,364	1/1:8,0:8:1.82:5,2,0	0/0:20,0:20:15.02:0,15,281	0/0:12,0:12:5.99:0,6,139	0/0:15,0:15:21.07:0,21,477	0/0:1,0:1:3.01:0,3,65
chr10	33983302	.	T	TGGG	3089.44	PASS	AB=0.889;AC=51;AF=0.911;AN=56;BaseQRankSum=-2.053;DP=443;FS=5.749;HRun=10;HaplotypeScore=94.6776;InbreedingCoeff=0.3377;MQ=75.44;MQ0=2;MQRankSum=-4.817;QD=7.34;ReadPosRankSum=-0.895;VQSLOD=-0.4484;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,7:16:21.03:330,21,0	1/1:7,0:9:11.97:97,12,0	0/0:22,0:22:22.88:0,23,336	0/1:13,0:12:7.37:7,0,160	1/1:9,0:9:8.26:116,8,0	0/1:5,0:5:0:0,0,0	1/1:16,0:20:18.04:257,18,0	1/1:15,0:23:17.86:146,18,0	1/1:8,0:8:6.02:92,6,0	1/1:14,0:27:22.19:197,22,0	0/1:7,0:14:24.63:25,0,27	1/1:3,9:13:8.97:138,9,0	1/1:10,0:15:30:211,30,0	1/1:4,0:12:4.98:29,5,0	1/1:10,0:16:10.97:61,11,0	1/1:5,0:14:11.95:92,12,0	1/1:21,0:21:24.05:319,24,0	1/1:3,0:10:10.21:71,10,0	1/1:6,0:16:28.14:209,28,0	1/1:5,0:15:11.76:82,12,0	1/1:17,0:30:11.06:74,11,0	1/1:4,0:15:15.91:104,16,0	1/1:5,2:15:5.75:85,6,0	1/1:11,0:11:6.02:112,6,0	1/1:9,0:21:12.64:108,13,0	1/1:8,0:16:15.57:104,16,0	1/1:16,0:26:14.02:85,14,0	1/1:6,0:9:6:63,6,0
chr10	33983929	.	G	GT	8350.43	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-8.064;DP=829;FS=3.022;HRun=2;HaplotypeScore=77.9879;InbreedingCoeff=0.9996;MQ=82.52;MQ0=0;MQRankSum=-1.439;QD=38.30;ReadPosRankSum=2.670;VQSLOD=5.5689;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,61:64:99:2596,175,0	0/0:9,0:9:27.09:0,27,350	0/0:23,0:23:66.16:0,66,794	0/0:22,0:21:62.52:0,63,716	1/1:0,33:33:90.26:1324,90,0	1/1:2,28:31:84.27:1238,84,0	1/1:0,28:28:66.22:989,66,0	0/0:22,0:22:63.20:0,63,817	1/1:0,19:19:48.16:719,48,0	0/0:42,0:42:99:0,123,1580	0/0:21,0:21:63.19:0,63,803	0/0:32,0:32:93.29:0,93,1191	0/0:32,0:32:93.30:0,93,1205	0/0:39,0:39:99:0,108,1401	0/0:32,0:32:93.29:0,93,1193	0/0:31,0:31:90.28:0,90,1154	1/1:0,43:42:99:1484,99,0	0/0:27,0:27:72.23:0,72,931	0/0:19,0:19:54.17:0,54,682	0/0:24,0:24:69.18:0,69,846	0/0:52,0:52:99:0,156,1962	0/0:27,0:27:78.25:0,78,1013	0/0:24,0:24:72.23:0,72,935	0/0:39,0:39:99:0,114,1463	0/0:28,0:28:81.25:0,81,1037	0/0:39,0:39:99:0,114,1479	0/0:18,0:18:51.16:0,51,649	0/0:9,0:9:27.05:0,27,320
chr10	33984216	.	TA	T	11407.20	PASS	AB=0.929;AC=41;AF=0.732;AN=56;BaseQRankSum=-15.147;DP=703;FS=1.467;HRun=9;HaplotypeScore=85.4747;InbreedingCoeff=0.8648;MQ=73.77;MQ0=0;MQRankSum=0.787;QD=22.37;ReadPosRankSum=0.760;VQSLOD=5.4919;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:35:71.09:0,71,361	1/1:0,15:15:39.02:357,39,0	0/0:13,1:14:4.18:0,4,231	0/1:10,1:13:24.17:24,0,158	0/0:8,0:30:67.18:0,67,387	0/0:6,0:33:85.70:0,86,466	0/0:6,0:21:48.92:0,49,311	1/1:7,28:35:84.03:769,84,0	0/0:5,0:30:80.01:0,80,451	1/1:4,25:29:75.04:687,75,0	1/1:3,23:26:63.03:577,63,0	1/1:4,22:26:54.02:494,54,0	1/1:3,29:32:81.04:741,81,0	1/1:2,21:23:54.03:494,54,0	1/1:2,20:22:48.01:439,48,0	1/1:0,18:18:51.03:467,51,0	0/0:4,0:30:80.03:0,80,454	1/1:0,8:8:21.01:192,21,0	1/1:3,16:19:48.01:435,48,0	1/1:4,26:30:72.02:659,72,0	1/1:4,21:25:57.02:522,57,0	1/1:3,29:32:84.04:769,84,0	1/1:1,31:32:87.05:796,87,0	1/1:1,24:25:69.04:632,69,0	1/1:4,26:30:79.86:719,80,0	1/1:4,24:28:71.99:647,72,0	1/1:4,35:39:99:934,102,0	1/1:0,3:3:6:55,6,0
chr10	33985477	.	AC	A	1618.83	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=11.878;DP=533;FS=12.011;HRun=5;HaplotypeScore=86.2568;InbreedingCoeff=0.9961;MQ=84.59;MQ0=0;MQRankSum=-11.617;QD=20.75;ReadPosRankSum=-1.382;VQSLOD=1.9470;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,13:15:27.08:306,27,0	0/0:9,0:9:24.08:0,24,327	0/0:13,0:14:23.92:0,24,445	0/0:21,0:21:57:0,57,703	1/1:3,12:15:30.09:340,30,0	1/1:0,13:13:36.10:406,36,0	1/1:3,8:11:21.06:238,21,0	0/0:28,0:28:69.22:0,69,927	1/1:2,8:10:24.04:259,24,0	0/0:27,0:27:81.27:0,81,1107	0/0:23,0:23:69.23:0,69,942	0/0:18,0:18:54.18:0,54,738	0/0:16,0:16:48.14:0,48,623	0/0:20,0:20:54.17:0,54,723	0/0:18,0:18:51.16:0,51,683	0/0:27,0:27:78.26:0,78,1067	1/1:1,13:14:24.03:258,24,0	0/0:13,0:13:27.07:0,27,351	0/0:18,0:18:45.12:0,45,570	0/0:22,0:22:66.20:0,66,885	0/0:29,0:29:84.28:0,84,1148	0/0:15,0:15:42.13:0,42,559	0/0:22,0:22:63.18:0,63,828	0/0:23,0:23:66.18:0,66,882	0/0:24,0:24:72.18:0,72,947	0/0:28,0:28:75.22:0,75,980	0/0:33,0:33:90.30:0,90,1229	0/0:7,0:7:21.07:0,21,287
chr10	33985503	.	A	ATT	2682.74	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=12.457;DP=517;FS=3.058;HRun=0;HaplotypeScore=84.3836;InbreedingCoeff=0.9969;MQ=86.30;MQ0=0;MQRankSum=-11.098;QD=38.32;ReadPosRankSum=-2.142;VQSLOD=5.1694;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,14:16:32.89:457,33,0	0/0:8,0:8:24.08:0,24,388	0/0:20,0:20:53.28:0,53,762	0/0:16,0:16:39.23:0,39,607	1/1:5,8:13:38.98:574,39,0	1/1:1,8:9:24.01:406,24,0	1/1:2,5:7:18.06:328,18,0	0/0:26,0:26:72.20:0,72,1083	1/1:1,8:9:24.04:410,24,0	0/0:24,0:24:72.20:0,72,1043	0/0:19,0:19:53.39:0,53,835	0/0:16,0:16:48.16:0,48,776	0/0:15,0:15:43.38:0,43,653	0/0:17,0:17:51.16:0,51,799	0/0:21,0:21:60.15:0,60,881	0/0:34,0:34:99:0,102,1567	1/1:1,15:16:39.13:695,39,0	0/0:11,0:11:33.11:0,33,538	0/0:16,0:16:48.14:0,48,712	0/0:23,0:23:69.19:0,69,1049	0/0:19,0:19:57.14:0,57,829	0/0:16,0:16:48.12:0,48,726	0/0:22,0:22:66.14:0,66,947	0/0:27,0:27:78.22:0,78,1212	0/0:27,0:27:81.26:0,81,1286	0/0:32,0:32:93.29:0,93,1443	0/0:27,0:27:78.23:0,78,1216	0/0:11,0:11:33.10:0,33,512
chr10	33985756	.	C	CAGG	5525.75	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=6.525;DP=656;FS=18.097;HRun=0;HaplotypeScore=94.0216;InbreedingCoeff=0.9989;MQ=88.96;MQ0=0;MQRankSum=-9.107;QD=51.64;ReadPosRankSum=4.287;VQSLOD=5.7254;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,26:31:69.24:1588,69,0	0/0:16,0:15:45.15:0,45,759	0/0:30,0:30:81:0,81,1249	0/0:25,0:25:72.25:0,72,1187	1/1:1,21:22:45.15:1036,45,0	1/1:0,13:13:33.11:760,33,0	1/1:1,9:11:21.07:484,21,0	0/0:26,0:26:75.26:0,75,1269	1/1:0,14:14:36.12:828,36,0	0/0:39,0:39:99:0,111,1864	0/0:29,0:29:81.28:0,81,1373	0/0:25,0:25:60.19:0,60,997	0/0:26,0:26:75.26:0,75,1269	0/0:23,0:23:66.23:0,66,1112	0/0:13,0:13:36.12:0,36,614	0/0:21,0:21:63.22:0,63,1075	1/1:1,14:16:36.12:830,36,0	0/0:20,0:20:60.18:0,60,984	0/0:31,0:31:84.28:0,84,1395	0/0:23,0:20:54.17:0,54,891	0/0:27,0:27:81.28:0,81,1348	0/0:20,0:20:57.20:0,57,972	0/0:23,0:23:63.16:0,63,1006	0/0:33,0:33:96.33:0,96,1636	0/0:19,0:18:45.15:0,45,767	0/0:37,1:38:42.26:0,42,1720	0/0:30,0:30:87.30:0,87,1458	0/0:12,0:12:30.10:0,30,490
chr10	33985916	.	TTTGG	T	2090.49	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=5.267;DP=542;FS=36.551;HRun=0;HaplotypeScore=114.9343;InbreedingCoeff=0.9643;MQ=81.00;MQ0=0;MQRankSum=-9.783;QD=41.81;ReadPosRankSum=-0.544;VQSLOD=1.6260;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,13:13:33.11:657,33,0	0/0:9,0:9:27.09:0,27,750	0/0:21,0:21:60.16:0,60,1442	0/0:18,0:18:51.06:0,51,1171	1/1:0,7:7:12.04:239,12,0	1/1:0,8:8:24.08:478,24,0	1/1:0,5:5:12.04:239,12,0	0/0:32,0:30:84.28:0,84,2230	1/1:1,10:11:27.09:538,27,0	0/0:28,0:27:81.28:0,81,2173	0/0:23,0:22:63.22:0,63,1710	0/0:24,0:23:69.22:0,69,1870	0/0:30,0:28:78.26:0,78,2088	0/0:28,0:27:81.28:0,81,2214	0/0:16,0:15:45.15:0,45,1215	0/0:13,0:13:39.13:0,39,1079	1/1:0,6:6:6.02:119,6,0	0/0:20,0:20:60.18:0,60,1616	0/0:22,0:21:63.20:0,63,1624	0/0:27,0:27:81.28:0,81,2264	0/0:40,0:40:99:0,120,3306	0/0:14,0:14:39.13:0,39,1065	0/0:19,0:19:57.20:0,57,1562	0/0:23,0:23:69.24:0,69,1858	0/0:20,0:19:54.19:0,54,1487	0/0:23,0:22:63.22:0,63,1689	0/0:34,0:34:99:0,99,2681	0/0:8,0:8:24.08:0,24,653
chr10	33986046	.	CTT	C	3726.66	PASS	AB=0.709;AC=34;AF=0.773;AN=44;BaseQRankSum=-0.678;DP=337;FS=2.654;HRun=15;HaplotypeScore=59.0226;InbreedingCoeff=0.6750;MQ=58.89;MQ0=6;MQRankSum=-2.810;QD=14.61;ReadPosRankSum=2.278;VQSLOD=2.8018;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	1/1:4,5:10:20.64:166,21,0	0/0:25,0:12:8.90:0,9,75	0/0:19,0:9:1.70:0,2,60	./.	./.	./.	1/1:13,15:29:47.74:462,48,0	./.	0/1:12,7:19:13.68:181,0,14	1/1:7,19:27:50.54:434,51,0	0/0:10,0:18:25.51:0,26,131	1/1:2,5:6:18:158,18,0	1/1:4,7:11:20.85:184,21,0	1/1:4,4:9:17.69:140,18,0	1/1:5,3:7:14.05:121,14,0	./.	1/1:8,1:9:11.58:85,12,0	1/1:9,5:13:17.65:137,18,0	1/1:10,12:23:41.71:361,42,0	1/1:1,5:6:11.99:106,12,0	1/1:2,5:7:20.98:181,21,0	0/1:6,0:11:3.87:4,0,109	0/0:4,1:7:13.47:0,13,73	1/1:3,11:14:35.91:317,36,0	1/1:8,8:18:26.42:263,26,0	1/1:9,11:21:24.15:296,24,0	1/1:4,6:10:14.98:132,15,0
chr10	33986079	.	CT	C	2711.96	PASS	AB=1.000;AC=35;AF=0.700;AN=50;BaseQRankSum=-0.989;DP=343;FS=28.696;HRun=12;HaplotypeScore=65.6373;InbreedingCoeff=0.7164;MQ=55.06;MQ0=12;MQRankSum=0.222;QD=9.79;ReadPosRankSum=4.173;VQSLOD=0.7330;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:2,0:2:5.87:0,6,35	1/1:3,5:7:11:75,11,0	0/0:23,1:10:8.99:0,9,78	0/1:17,0:5:4.22:4,0,64	./.	./.	./.	1/1:10,14:18:23.19:152,23,0	0/0:1,0:1:2.90:0,3,16	1/1:2,22:21:56.78:440,57,0	1/1:10,8:18:27.82:187,28,0	0/0:17,0:16:28.68:0,29,150	1/1:1,15:14:35.86:278,36,0	1/1:2,15:12:31.92:237,32,0	1/1:5,11:10:20.29:147,20,0	1/1:2,4:6:13.83:98,14,0	0/0:1,0:1:2.96:0,3,19	1/1:5,8:11:0.87:153,1,0	1/1:7,11:13:22.95:168,23,0	1/1:9,9:14:10.54:140,11,0	1/1:5,1:5:2.98:23,3,0	1/1:3,6:7:15.51:106,16,0	0/0:12,0:12:23.35:0,23,150	0/0:8,0:5:8.69:0,9,48	1/1:7,12:13:11.77:169,12,0	1/1:7,9:13:11.28:150,11,0	1/1:6,9:15:29.38:216,29,0	1/1:2,7:9:17.93:139,18,0
chr10	33986316	.	TACC	T	20415.09	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=1.736;DP=516;FS=3.859;HRun=0;HaplotypeScore=90.9459;InbreedingCoeff=0.9529;MQ=60.11;MQ0=2;MQRankSum=-7.566;QD=44.19;ReadPosRankSum=6.558;VQSLOD=6.2060;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,17:19:45.11:751,45,0	1/1:0,5:5:9.03:159,9,0	0/0:29,0:25:71.92:0,72,1697	0/0:25,0:19:54.18:0,54,1139	1/1:2,21:23:45.11:751,45,0	1/1:1,23:24:63.22:1104,63,0	1/1:0,11:11:27.09:469,27,0	1/1:1,22:23:66.23:1159,66,0	1/1:0,14:14:36.12:635,36,0	1/1:0,16:16:48.16:847,48,0	1/1:1,23:24:54.18:949,54,0	1/1:0,12:12:33.11:563,33,0	1/1:0,15:14:42.14:732,42,0	1/1:0,23:23:57.20:996,57,0	1/1:1,27:28:63.22:1099,63,0	1/1:0,26:26:72.25:1269,72,0	1/1:0,8:8:21.07:370,21,0	1/1:1,11:12:30.10:529,30,0	1/1:1,13:14:36.12:626,36,0	1/1:2,13:15:39.13:688,39,0	1/1:1,24:23:60.21:1052,60,0	1/1:0,12:12:33.11:579,33,0	1/1:0,16:16:45.15:787,45,0	1/1:2,26:28:59.94:1055,60,0	1/1:0,18:17:45.15:790,45,0	1/1:1,25:26:75.25:1296,75,0	1/1:0,19:19:54.18:950,54,0	1/1:0,6:6:12.04:212,12,0
chr10	33986587	.	C	CA	586.80	PASS	AB=0.950;AC=3;AF=0.054;AN=56;BaseQRankSum=4.356;DP=538;FS=0.000;HRun=6;HaplotypeScore=78.7050;InbreedingCoeff=0.5919;MQ=74.41;MQ0=0;MQRankSum=-0.265;QD=13.34;ReadPosRankSum=-1.945;VQSLOD=2.5027;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,23:25:57.14:680,57,0	0/0:7,0:7:21.05:0,21,214	0/0:19,0:19:7.15:0,7,345	0/0:15,0:15:22.49:0,22,308	0/0:19,0:19:43.99:0,44,281	0/1:18,1:19:7.77:8,0,242	0/0:20,1:21:18.34:0,18,250	0/0:34,0:34:84.12:0,84,836	0/0:22,0:22:57.42:0,57,384	0/0:26,0:26:69.15:0,69,697	0/0:17,0:17:51.09:0,51,507	0/0:19,0:19:48.10:0,48,490	0/0:12,0:12:33.07:0,33,336	0/0:23,0:23:63.14:0,63,643	0/0:16,0:16:45.07:0,45,446	0/0:22,0:22:63.14:0,63,643	0/0:23,0:23:32.06:0,32,308	0/0:10,0:10:30.07:0,30,306	0/0:16,0:16:42.08:0,42,421	0/0:24,0:24:60.13:0,60,611	0/0:28,0:28:78.18:0,78,795	0/0:21,0:21:57.13:0,57,581	0/0:20,0:20:54.12:0,54,551	0/0:25,0:24:51.11:0,51,520	0/0:13,0:13:36.06:0,36,359	0/0:19,0:19:54.12:0,54,551	0/0:21,0:21:60.14:0,60,612	0/0:2,0:2:6.01:0,6,61
chr10	33986708	.	C	CAAAAAAAAAAA	12887.85	PASS	AC=44;AF=0.957;AN=46;BaseQRankSum=-0.767;DP=411;FS=3.076;HRun=11;HaplotypeScore=143.1890;InbreedingCoeff=0.4470;MQ=42.92;MQ0=6;MQRankSum=-1.060;QD=31.82;ReadPosRankSum=-1.301;VQSLOD=1.8845;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	1/1:8,0:9:15.01:554,15,0	1/1:8,0:2:4.56:17,5,0	0/0:6,0:2:2.92:0,3,59	./.	1/1:1,0:1:2.37:8,2,0	./.	1/1:37,0:37:69.02:1423,69,0	./.	1/1:23,0:22:47.84:714,48,0	1/1:7,0:31:17.27:405,17,0	1/1:19,0:19:47.88:754,48,0	1/1:13,0:12:32.87:818,33,0	1/1:20,0:20:38.96:958,39,0	1/1:13,0:12:26.89:572,27,0	1/1:25,0:22:23.91:417,24,0	./.	1/1:11,0:10:26.98:670,27,0	1/1:5,1:13:24.08:783,24,0	1/1:7,14:25:6.02:222,6,0	1/1:5,0:5:10.59:350,11,0	1/1:3,0:16:15.05:320,15,0	1/1:7,0:30:27.09:530,27,0	1/1:12,0:14:27.09:585,27,0	1/1:5,0:15:3.48:114,3,0	1/1:23,0:21:51.02:1064,51,0	1/1:25,0:25:50.63:1028,51,0	1/1:20,0:19:26.88:580,27,0
chr10	33987509	.	AC	A	4870.29	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=17.478;DP=667;FS=0.718;HRun=3;HaplotypeScore=100.3443;InbreedingCoeff=0.9998;MQ=67.78;MQ0=0;MQRankSum=-3.849;QD=29.34;ReadPosRankSum=1.462;VQSLOD=4.2028;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,22:26:54.12:630,54,0	0/0:10,0:10:30.09:0,30,415	0/0:24,0:24:47.63:0,48,708	0/0:20,0:19:51.17:0,51,711	1/1:5,23:28:68.98:762,69,0	1/1:3,29:32:83.54:1036,84,0	1/1:0,27:27:78.19:916,78,0	0/0:52,0:52:99:0,150,2109	1/1:2,26:28:75.19:880,75,0	0/0:24,0:24:72.24:0,72,1036	0/0:27,0:27:78.22:0,78,1055	0/0:23,0:23:69.22:0,69,960	0/0:23,0:23:69.23:0,69,990	0/0:17,0:17:48.16:0,48,690	0/0:19,0:19:57.18:0,57,803	0/0:23,0:23:69.21:0,69,957	1/1:4,21:25:54.17:646,54,0	0/0:17,0:17:48.16:0,48,686	0/0:25,0:25:69.20:0,69,956	0/0:29,0:29:84.25:0,84,1168	0/0:16,0:16:45.15:0,45,647	0/0:22,0:22:63.21:0,63,906	0/0:17,0:17:48.14:0,48,667	0/0:17,0:17:51.15:0,51,714	0/0:12,0:12:33.11:0,33,475	0/0:28,0:28:75.23:0,75,1045	0/0:36,0:36:99:0,108,1531	0/0:20,0:20:60.20:0,60,863
chr10	33987747	.	GAA	G	8125.54	PASS	AB=0.552;AC=50;AF=0.893;AN=56;BaseQRankSum=-2.832;DP=478;FS=11.656;HRun=14;HaplotypeScore=75.9665;InbreedingCoeff=0.4898;MQ=70.94;MQ0=1;MQRankSum=0.870;QD=17.98;ReadPosRankSum=3.889;VQSLOD=3.0495;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,23:25:62.73:560,63,0	0/1:1,7:8:7.81:96,0,8	0/0:16,0:10:5.72:0,6,33	0/0:9,0:8:11.90:0,12,117	1/1:2,25:27:68.90:637,69,0	1/1:3,12:15:29.78:277,30,0	1/1:1,11:12:26.92:238,27,0	1/1:7,16:24:50.68:447,51,0	1/1:1,11:12:24.02:222,24,0	1/1:5,19:24:42.67:453,43,0	1/1:0,16:17:44.73:400,45,0	1/1:6,1:17:22.14:111,22,0	1/1:3,20:22:54.03:498,54,0	1/1:1,12:13:28.51:243,29,0	1/1:0,18:18:51.06:472,51,0	0/1:4,12:16:13.87:217,0,14	1/1:5,14:19:29.93:277,30,0	1/1:2,5:7:11.97:110,12,0	1/1:5,14:20:20.62:347,21,0	1/1:5,17:24:44.34:383,44,0	1/1:1,2:3:3:28,3,0	1/1:1,11:12:23.91:222,24,0	1/1:4,0:25:45.21:207,45,0	1/1:2,0:5:8.22:36,8,0	1/1:5,9:14:23.94:220,24,0	1/1:3,20:24:47.90:491,48,0	1/1:7,31:39:70.57:784,71,0	1/1:1,6:9:5.69:149,6,0
chr10	33987916	.	AATG	A	3439.94	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=13.608;DP=562;FS=4.305;HRun=0;HaplotypeScore=84.5947;InbreedingCoeff=0.9981;MQ=79.01;MQ0=0;MQRankSum=-5.533;QD=35.83;ReadPosRankSum=0.736;VQSLOD=4.0824;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,9:12:30.06:470,30,0	0/0:10,0:10:30.10:0,30,680	0/0:10,0:10:30.05:0,30,599	0/0:17,0:17:33.40:0,33,942	1/1:1,27:28:75.15:1203,75,0	1/1:0,14:14:30.07:460,30,0	1/1:3,14:17:36.12:599,36,0	0/0:35,0:35:99:0,102,2248	1/1:1,10:11:24.08:389,24,0	0/0:22,0:22:63.21:0,63,1386	0/0:26,0:26:75.26:0,75,1673	0/0:18,0:18:54.19:0,54,1221	0/0:24,0:24:69.24:0,69,1554	0/0:23,0:23:66.21:0,66,1447	0/0:20,0:20:60.19:0,60,1313	0/0:16,0:16:48.16:0,48,1071	1/1:1,13:14:20.53:319,21,0	0/0:17,0:17:48.16:0,48,1067	0/0:14,0:14:36.12:0,36,800	0/0:28,0:28:84.29:0,84,1899	0/0:21,0:21:63.20:0,63,1381	0/0:21,0:21:63.22:0,63,1422	0/0:25,0:25:75.24:0,75,1655	0/0:18,0:18:54.19:0,54,1219	0/0:22,0:22:66.21:0,66,1453	0/0:30,0:30:84.29:0,84,1887	0/0:34,0:33:99:0,99,2208	0/0:15,0:15:41.04:0,41,950
chr10	33988949	.	T	TA	4272.29	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=4.888;DP=452;FS=13.044;HRun=2;HaplotypeScore=47.8512;InbreedingCoeff=0.9456;MQ=62.30;MQ0=0;MQRankSum=-1.917;QD=40.30;ReadPosRankSum=2.598;VQSLOD=4.0159;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,25:25:75.25:1115,75,0	0/0:11,0:11:33.11:0,33,428	0/0:4,0:3:9.02:0,9,96	0/0:6,0:6:15.01:0,15,162	1/1:1,25:26:68.97:992,69,0	1/1:0,17:17:45.15:658,45,0	1/1:1,3:4:9.03:135,9,0	0/0:38,0:38:99:0,102,1307	1/1:1,13:14:39.13:568,39,0	0/0:20,0:20:57.18:0,57,738	0/0:28,0:28:81.26:0,81,1049	0/0:11,0:11:33.11:0,33,428	0/0:9,0:9:27.07:0,27,335	0/0:8,0:8:24.08:0,24,311	0/0:13,0:13:39.13:0,39,506	0/0:12,0:12:36.12:0,36,466	1/1:1,19:19:54.18:805,54,0	0/0:17,0:17:48.16:0,48,623	0/0:20,0:20:57.19:0,57,739	0/0:22,0:22:63.20:0,63,817	0/0:13,0:13:39.13:0,39,505	0/0:4,0:4:12.04:0,12,156	0/0:15,0:15:39.13:0,39,505	0/0:3,0:3:6.02:0,6,78	0/0:21,0:21:60.19:0,60,779	0/0:22,0:22:66.20:0,66,832	0/0:37,0:36:99:0,105,1301	0/0:12,0:12:25.92:0,26,383
chr10	33989541	.	G	GA	2374.65	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-10.018;DP=499;FS=11.185;HRun=8;HaplotypeScore=48.2108;InbreedingCoeff=0.9905;MQ=83.51;MQ0=0;MQRankSum=-1.367;QD=22.83;ReadPosRankSum=0.608;VQSLOD=3.3622;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,15:19:20.68:492,21,0	0/0:6,0:6:15.01:0,15,137	0/0:16,0:16:36.02:0,36,328	0/0:14,0:14:23.96:0,24,208	1/1:3,25:29:57.08:625,57,0	1/1:5,12:17:33.10:381,33,0	1/1:2,8:10:27.07:302,27,0	0/0:31,0:31:68.83:0,69,628	1/1:3,14:17:39.12:450,39,0	0/0:22,0:22:57.02:0,57,522	0/0:38,0:38:96.02:0,96,873	0/0:17,0:17:48.03:0,48,439	0/0:22,0:22:57.02:0,57,522	0/0:20,0:20:57.03:0,57,522	0/0:22,0:22:63.02:0,63,572	0/0:11,0:12:32.05:0,32,281	1/1:1,11:12:27.08:312,27,0	0/0:11,0:11:30.02:0,30,275	0/0:18,0:18:51.02:0,51,463	0/0:29,0:29:74.99:0,75,678	0/0:16,0:16:42.02:0,42,384	0/0:12,0:12:30.02:0,30,275	0/0:16,0:16:48.03:0,48,439	0/0:8,0:8:21.01:0,21,192	0/0:11,0:11:30.02:0,30,274	0/0:25,0:26:74.05:0,74,656	0/0:23,0:23:56.98:0,57,514	0/0:5,0:5:15.01:0,15,137
chr10	33990056	.	AG	A	632.64	PASS	AC=12;AF=0.231;AN=52;BaseQRankSum=5.199;DP=305;FS=10.557;HRun=4;HaplotypeScore=30.3838;InbreedingCoeff=0.8239;MQ=45.62;MQ0=26;MQRankSum=-2.748;QD=10.04;ReadPosRankSum=-1.039;VQSLOD=-0.3042;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,11:10:12.04:143,12,0	0/0:9,0:9:24.03:0,24,297	./.	./.	1/1:0,15:15:41.84:430,42,0	1/1:0,6:5:6.02:72,6,0	1/1:0,8:5:3.01:36,3,0	0/0:8,0:5:12.04:0,12,167	1/1:0,3:3:3.01:36,3,0	0/0:11,0:10:21.96:0,22,296	0/0:11,0:10:30.09:0,30,403	0/0:15,0:14:33.07:0,33,439	0/0:11,0:10:27.09:0,27,378	0/0:7,0:7:12.04:0,12,166	0/0:13,0:11:27.09:0,27,373	0/0:5,0:5:12:0,12,146	1/1:3,15:15:6.02:72,6,0	0/0:16,0:16:23.44:0,23,301	0/0:8,0:6:18.06:0,18,252	0/0:12,0:12:36.11:0,36,485	0/0:20,0:20:12.04:0,12,168	0/0:17,0:17:48.14:0,48,650	0/0:8,0:8:21.07:0,21,294	0/0:9,0:9:18.06:0,18,252	0/0:11,0:10:27.09:0,27,378	0/0:9,0:8:21.07:0,21,294	0/0:12,0:8:17.80:0,18,251	0/0:4,0:4:9.03:0,9,126
chr10	33990154	.	AT	A	1215.60	PASS	AB=1.000;AC=14;AF=0.250;AN=56;BaseQRankSum=6.112;DP=406;FS=0.000;HRun=3;HaplotypeScore=85.3530;InbreedingCoeff=0.7484;MQ=52.35;MQ0=4;MQRankSum=-5.099;QD=14.47;ReadPosRankSum=2.036;VQSLOD=2.8219;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,7:7:8.99:95,9,0	0/0:10,0:10:24:0,24,287	0/1:14,0:4:11.12:11,0,109	0/1:10,0:2:0.73:1,0,9	1/1:1,26:22:63.11:742,63,0	1/1:0,10:9:21.02:243,21,0	1/1:0,4:3:3.01:37,3,0	0/0:25,0:25:75.19:0,75,978	1/1:0,5:4:12.04:148,12,0	0/0:24,0:24:66.49:0,66,768	0/0:23,0:23:45.01:0,45,558	0/0:19,0:18:27:0,27,321	0/0:13,0:13:9.03:0,9,129	0/0:12,0:12:8.88:0,9,78	0/0:14,0:14:14.90:0,15,147	0/0:17,0:17:12.04:0,12,172	1/1:0,4:3:9.03:111,9,0	0/0:14,0:14:17.92:0,18,189	0/0:13,0:12:36.08:0,36,486	0/0:21,0:21:60.11:0,60,833	0/0:11,0:11:26.98:0,27,326	0/0:19,0:19:42.04:0,42,551	0/0:14,0:14:26.96:0,27,317	0/0:14,0:14:18.05:0,18,241	0/0:19,0:19:15.05:0,15,215	0/0:17,0:17:45.15:0,45,614	0/0:16,0:16:20.97:0,21,254	0/0:7,0:7:8.99:0,9,89
chr10	33990178	.	A	AGAAAGAAGGAAG	15795.71	PASS	AB=1.000;AC=42;AF=0.750;AN=56;BaseQRankSum=-9.771;DP=463;FS=0.000;HRun=0;HaplotypeScore=128.8545;InbreedingCoeff=0.5925;MQ=48.06;MQ0=3;MQRankSum=4.724;QD=40.92;ReadPosRankSum=0.145;VQSLOD=3.9194;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:17,0:16:99:156,0,99	1/1:1,5:8:9.03:400,9,0	0/0:14,0:3:3.01:0,3,30	0/0:8,0:2:2.80:0,3,13	0/0:27,0:27:59.21:0,59,940	0/0:11,0:10:11.82:0,12,172	0/0:9,0:8:8.82:0,9,106	1/1:21,0:20:45.15:793,45,0	0/0:8,0:7:11.97:0,12,139	1/1:4,17:29:68.90:2586,69,0	1/1:0,23:29:39.07:758,39,0	1/1:2,12:17:12.04:724,12,0	1/1:1,9:16:9.03:525,9,0	1/1:1,11:13:6.02:362,6,0	1/1:0,11:15:5.89:353,6,0	1/1:1,12:16:3.01:181,3,0	0/1:12,0:11:69.36:69,0,423	1/1:12,0:12:8.98:345,9,0	1/1:2,11:18:44.98:1492,45,0	1/1:0,17:22:48.02:1389,48,0	1/1:11,0:11:24.07:414,24,0	1/1:2,13:19:23.99:974,24,0	1/1:18,0:18:24.08:617,24,0	1/1:12,0:12:6.12:185,6,0	1/1:0,17:19:12.04:721,12,0	1/1:2,14:20:51.16:1338,51,0	1/1:1,11:19:11.83:568,12,0	1/1:5,8:20:18.06:844,18,0
chr10	33990182	.	A	AGAAGGAAG	11556.19	PASS	AB=0.935;AC=35;AF=0.625;AN=56;BaseQRankSum=-7.009;DP=445;FS=1.747;HRun=0;HaplotypeScore=112.3353;InbreedingCoeff=0.3265;MQ=47.21;MQ0=3;MQRankSum=2.163;QD=31.66;ReadPosRankSum=2.895;VQSLOD=4.7213;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:17,0:16:30.69:31,0,94	1/1:8,0:8:9.03:251,9,0	0/0:10,0:3:3.01:0,3,30	0/0:6,0:2:2.80:0,3,13	0/0:23,0:23:59.21:0,59,836	0/0:12,0:11:14.48:0,14,173	0/0:10,0:9:11.94:0,12,121	0/1:20,0:19:12.83:657,0,13	0/0:6,0:5:11.95:0,12,106	1/1:26,0:26:67.66:1758,68,0	1/1:27,0:27:36.11:645,36,0	1/1:16,1:16:12.04:454,12,0	1/1:14,0:14:9.03:372,9,0	1/1:12,0:12:6.02:239,6,0	1/1:14,0:14:5.95:230,6,0	1/1:16,0:16:3.01:110,3,0	0/0:11,0:10:16.14:0,16,254	0/1:2,9:12:7.14:254,0,7	1/1:17,0:16:40.16:1117,40,0	1/1:19,0:19:24.22:1046,24,0	0/1:10,0:10:24.03:291,0,24	1/1:15,0:15:4.14:687,4,0	1/1:0,18:21:23.93:878,24,0	1/1:2,11:17:6.12:259,6,0	0/1:20,0:20:4.89:485,0,5	1/1:19,0:20:14.48:995,14,0	0/1:20,0:20:12.01:381,0,12	0/1:22,0:21:30.42:416,0,30
chr10	33990214	.	A	AG	981.08	PASS	AB=0.755;AC=5;AF=0.089;AN=56;BaseQRankSum=4.863;DP=443;FS=6.458;HRun=1;HaplotypeScore=113.5453;InbreedingCoeff=-0.1010;MQ=46.35;MQ0=2;MQRankSum=-6.468;QD=12.11;ReadPosRankSum=2.349;VQSLOD=2.3345;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:17,3:19:68.91:105,0,69	0/0:9,0:9:21.04:0,21,244	0/0:6,0:5:12.91:0,13,145	0/0:9,0:8:20.43:0,20,215	0/1:7,17:24:63.11:688,0,63	0/1:10,6:15:99:138,0,155	0/1:12,1:13:17.77:18,0,168	0/0:25,0:23:63.11:0,63,742	0/1:4,4:8:54.55:148,0,55	0/0:26,0:25:69.98:0,70,753	0/0:16,0:16:17.90:0,18,183	0/0:21,0:20:30:0,30,299	0/0:18,0:18:36.05:0,36,409	0/0:9,0:9:18.03:0,18,203	0/0:13,0:13:21.01:0,21,226	0/0:14,0:14:15.03:0,15,179	0/0:12,1:11:26.54:0,27,229	0/0:11,0:11:29.99:0,30,356	0/0:20,0:18:54.06:0,54,580	0/0:17,0:17:41.79:0,42,434	0/0:13,0:13:30.03:0,30,367	0/0:14,0:14:26.99:0,27,276	0/0:17,0:17:32.97:0,33,346	0/0:16,0:16:21.39:0,21,235	0/0:18,0:18:36.06:0,36,409	0/0:16,0:16:41.05:0,41,456	0/0:16,0:16:24.02:0,24,266	0/0:25,0:25:42.06:0,42,473
chr10	33990528	.	CCTCT	C	643.85	PASS	AB=0.862;AC=22;AF=0.423;AN=52;BaseQRankSum=1.109;DP=621;FS=48.566;HRun=0;HaplotypeScore=110.7329;InbreedingCoeff=0.2893;MQ=69.12;MQ0=20;MQRankSum=-0.419;QD=2.45;ReadPosRankSum=2.614;VQSLOD=0.0768;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:27:21.07:0,21,346	1/1:8,0:7:2.73:35,3,0	./.	./.	0/0:29,0:28:8.87:0,9,81	0/0:25,0:23:33.10:0,33,487	0/0:21,0:21:8.73:0,9,113	0/0:38,0:36:1.25:0,1,3	0/0:20,0:20:8.99:0,9,135	0/0:30,0:28:1.82:0,2,5	1/1:13,1:16:6.01:74,6,0	0/0:17,0:17:14.77:0,15,213	1/1:16,4:20:5.62:92,6,0	0/1:15,3:18:0.82:92,0,1	0/1:23,0:22:6.44:36,0,6	1/1:15,3:18:5.77:92,6,0	0/0:10,0:18:3.01:0,3,62	0/1:4,0:7:3.59:47,0,4	0/0:17,0:17:6.01:0,6,62	1/1:19,2:21:2.92:17,3,0	0/0:30,0:30:0:0,0,0	1/1:20,2:22:3.01:46,3,0	0/0:23,0:23:6.02:0,6,86	0/1:19,1:21:31.24:31,0,164	1/1:25,0:24:6.01:80,6,0	1/1:21,2:22:2.34:74,2,0	0/1:10,1:13:58.99:59,0,97	0/1:25,0:25:6.69:22,0,7
chr10	33990667	.	C	CAACCACCTTT	14578	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-10.452;DP=620;FS=7.728;HRun=0;HaplotypeScore=174.5019;InbreedingCoeff=0.9991;MQ=79.61;MQ0=0;MQRankSum=-14.624;QD=111.28;ReadPosRankSum=3.377;VQSLOD=5.1764;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,17:21:54.19:2818,54,0	0/0:13,0:13:39.13:0,39,1363	0/0:24,0:24:72.23:0,72,2225	0/0:19,0:19:54.18:0,54,1655	1/1:0,20:28:48.16:2561,48,0	1/1:0,20:28:54.19:2958,54,0	1/1:1,18:22:45.15:2464,45,0	0/0:37,0:37:99:0,108,3137	1/1:0,16:20:45.15:2465,45,0	0/0:39,0:39:99:0,117,3682	0/0:21,0:21:63.15:0,63,2114	0/0:31,0:31:90.29:0,90,2807	0/0:25,0:25:75.24:0,75,2477	0/0:21,0:21:63.20:0,63,2114	0/0:24,0:24:72.23:0,72,2364	0/0:16,0:16:48.15:0,48,1568	1/1:1,8:12:24.08:1311,24,0	0/0:14,0:14:39.11:0,39,1270	0/0:17,0:17:48.11:0,48,1441	0/0:17,0:17:51.18:0,51,1687	0/0:21,0:21:60.21:0,60,1971	0/0:30,0:30:87.30:0,87,3033	0/0:20,0:20:60.16:0,60,1843	0/0:24,0:24:69.22:0,69,2329	0/0:23,0:23:69.19:0,69,2170	0/0:21,0:21:60.20:0,60,2010	0/0:24,0:24:72.21:0,72,2270	0/0:8,0:8:24.03:0,24,674
chr10	33991607	.	C	CA	17954.07	PASS	AB=1.000;AC=53;AF=0.946;AN=56;BaseQRankSum=0.279;DP=603;FS=1.075;HRun=7;HaplotypeScore=130.0568;InbreedingCoeff=0.8130;MQ=68.61;MQ0=0;MQRankSum=-5.300;QD=30.23;ReadPosRankSum=3.794;VQSLOD=2.9985;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,27:30:75.23:906,75,0	1/1:2,10:12:30.09:362,30,0	0/0:9,0:9:24.03:0,24,227	0/1:8,0:8:1.46:1,0,125	1/1:1,36:37:99:1234,105,0	1/1:1,11:12:33.10:399,33,0	1/1:1,11:12:27.08:326,27,0	1/1:5,21:26:66.06:732,66,0	1/1:1,12:13:30.09:362,30,0	1/1:4,28:32:86.94:1024,87,0	1/1:5,29:34:81.20:956,81,0	1/1:0,14:14:39.12:471,39,0	1/1:3,22:25:63.19:761,63,0	1/1:2,10:12:30.09:362,30,0	1/1:3,21:24:60.18:725,60,0	1/1:1,20:21:57.17:685,57,0	1/1:2,25:28:72.09:848,72,0	1/1:1,24:25:72.22:868,72,0	1/1:3,20:23:60.13:701,60,0	1/1:4,30:35:90.14:1064,90,0	1/1:2,16:18:36.11:435,36,0	1/1:3,17:20:54.12:632,54,0	1/1:1,21:22:57.17:688,57,0	1/1:0,11:11:33.10:399,33,0	1/1:3,24:26:63.19:753,63,0	1/1:4,23:27:72.20:850,72,0	1/1:0,36:35:96.29:1159,96,0	1/1:1,9:10:20.80:252,21,0
chr10	33991757	.	A	AT	20096.56	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-13.099;DP=685;FS=5.165;HRun=1;HaplotypeScore=66.4150;InbreedingCoeff=0.9712;MQ=81.73;MQ0=0;MQRankSum=-4.850;QD=42.22;ReadPosRankSum=2.694;VQSLOD=5.4542;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,105,1430	1/1:1,14:15:36.12:575,36,0	0/0:22,0:22:45.68:0,46,790	0/0:29,0:29:72.03:0,72,971	0/0:25,0:25:75.25:0,75,1043	0/0:25,0:24:75.25:0,75,1049	0/0:15,0:15:45.15:0,45,629	1/1:3,26:29:78.23:1193,78,0	0/0:32,0:32:96.32:0,96,1343	1/1:1,28:29:84.29:1335,84,0	1/1:0,17:17:45.15:719,45,0	1/1:1,17:18:48.16:767,48,0	1/1:0,26:26:63.21:1007,63,0	1/1:2,20:22:57.19:911,57,0	1/1:0,41:41:99:1823,114,0	1/1:0,35:35:84.29:1343,84,0	0/0:25,0:25:63.21:0,63,881	1/1:1,23:24:63.17:978,63,0	1/1:1,17:18:54.18:843,54,0	1/1:0,23:23:54.18:863,54,0	1/1:1,37:38:99:1679,105,0	1/1:1,20:21:54.18:863,54,0	1/1:0,19:19:51.17:815,51,0	1/1:1,18:19:51.17:815,51,0	1/1:0,25:25:75.26:1198,75,0	1/1:1,24:25:75.19:1124,75,0	1/1:1,29:30:75.26:1196,75,0	1/1:0,2:2:3.01:48,3,0
chr10	33992264	.	A	AGTGT	2158.32	PASS	AB=0.853;AC=40;AF=0.800;AN=50;BaseQRankSum=-2.379;DP=562;FS=0.000;HRun=0;HaplotypeScore=126.0914;InbreedingCoeff=-0.0135;MQ=65.39;MQ0=13;MQRankSum=1.817;QD=4.54;ReadPosRankSum=-0.363;VQSLOD=2.4072;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:36,0:36:2.99:24,3,0	0/0:7,0:7:0.89:0,1,2	./.	./.	0/1:23,0:22:0:0,0,0	1/1:18,0:18:2.93:49,3,0	0/1:23,0:23:0:0,0,0	1/1:30,0:27:5.99:62,6,0	1/1:16,0:16:5.99:54,6,0	1/1:16,0:16:8.98:92,9,0	1/1:7,0:7:3.01:70,3,0	1/1:10,0:10:3.01:64,3,0	0/1:5,1:16:19.51:74,0,20	1/1:11,0:12:20.54:314,21,0	1/1:11,4:19:12.04:280,12,0	0/1:10,1:12:70.64:71,0,81	1/1:24,0:24:6:76,6,0	0/1:16,0:17:1.22:300,0,1	1/1:20,3:23:9.03:176,9,0	0/1:18,1:23:34.11:136,0,34	0/1:37,10:53:13.97:64,0,14	./.	1/1:17,0:17:2.91:43,3,0	0/1:27,0:35:0.11:0,0,1	1/1:11,0:13:2.86:25,3,0	1/1:7,0:10:8.76:123,9,0	1/1:10,0:10:8.96:86,9,0	1/1:4,4:8:5.75:82,6,0
chr10	33995431	.	G	GA	4678.30	PASS	AB=0.834;AC=36;AF=0.643;AN=56;BaseQRankSum=-4.957;DP=338;FS=19.593;HRun=10;HaplotypeScore=48.1952;InbreedingCoeff=0.5611;MQ=72.14;MQ0=0;MQRankSum=3.909;QD=19.10;ReadPosRankSum=-0.358;VQSLOD=3.5333;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:26.93:0,27,222	1/1:0,7:7:21.05:224,21,0	0/0:12,0:12:8.02:0,8,72	0/1:5,0:5:3.67:17,0,4	0/0:18,0:19:37.96:0,38,301	0/1:11,1:12:5:5,0,170	0/1:10,1:11:8:8,0,148	1/1:5,12:18:17.32:364,17,0	0/0:11,0:11:19.52:0,20,212	0/1:9,5:14:6.62:133,0,7	1/1:3,10:14:26.23:314,26,0	0/0:7,0:7:17.97:0,18,148	0/1:1,6:7:3.59:171,0,4	1/1:0,9:9:21.05:224,21,0	1/1:3,5:8:15.04:160,15,0	1/1:4,12:16:36.09:384,36,0	0/0:13,0:13:38.54:0,39,305	1/1:2,10:12:5.43:262,5,0	1/1:1,8:9:24.06:256,24,0	1/1:6,20:26:38.40:586,38,0	1/1:0,4:4:12.03:128,12,0	1/1:3,11:14:27.07:288,27,0	0/0:14,0:14:32.96:0,33,271	0/1:7,1:8:8.01:8,0,148	1/1:6,8:14:2.43:231,2,0	1/1:3,11:14:36.09:381,36,0	1/1:3,14:18:23.32:438,23,0	1/1:2,3:5:9.02:96,9,0
chr10	33995859	.	CA	C	696.77	PASS	AB=0.781;AC=13;AF=0.232;AN=56;BaseQRankSum=6.166;DP=540;FS=7.422;HRun=15;HaplotypeScore=68.3917;InbreedingCoeff=0.4230;MQ=63.10;MQ0=1;MQRankSum=0.591;QD=4.20;ReadPosRankSum=5.254;VQSLOD=0.8231;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,2:44:61.50:0,61,635	0/0:9,0:9:14.96:0,15,125	0/1:16,1:13:21.55:22,0,67	0/0:12,0:9:11.33:0,11,66	1/1:12,10:23:6.46:153,6,0	1/1:3,13:17:11.17:191,11,0	0/1:7,8:16:56.45:60,0,56	0/0:26,0:28:53.80:0,54,452	1/1:7,15:22:35.28:230,35,0	0/0:22,3:26:9.75:0,10,316	0/1:11,4:15:14.55:15,0,132	0/0:16,1:19:9.68:0,10,207	0/0:17,0:18:26.02:0,26,233	0/0:16,0:16:32.72:0,33,247	0/0:14,1:17:32.68:0,33,251	0/0:21,0:23:45.22:0,45,396	1/1:5,11:16:20.51:135,21,0	0/0:16,0:16:26.93:0,27,221	0/0:16,1:17:33.44:0,33,283	0/0:19,1:20:19.72:0,20,283	0/0:18,2:20:3.34:0,3,258	0/0:16,0:16:41.97:0,42,362	0/1:11,5:17:54.45:54,0,177	0/0:17,1:18:22.69:0,23,312	0/0:16,2:18:11.96:0,12,216	0/0:27,0:27:31.39:0,31,365	0/1:17,3:21:3.55:4,0,221	0/0:8,1:9:4.71:0,5,160
chr10	33996822	.	T	TGA	184.16	PASS	AB=0.957;AC=8;AF=0.148;AN=54;BaseQRankSum=7.622;DP=569;FS=0.000;HRun=0;HaplotypeScore=102.7519;InbreedingCoeff=-0.1752;MQ=56.17;MQ0=6;MQRankSum=-0.042;QD=1.04;ReadPosRankSum=2.449;VQSLOD=1.7798;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:18,0:17:15.58:41,0,16	0/0:9,0:9:9.38:0,9,79	0/0:13,0:6:13.64:0,14,133	./.	0/1:25,0:25:16.98:17,0,31	0/1:34,0:34:5.67:6,0,39	0/0:30,0:30:2.18:0,2,66	0/0:21,0:21:32.88:0,33,594	0/1:28,0:28:27.77:28,0,29	0/0:26,0:26:69.14:0,69,782	0/0:27,0:27:43.42:0,43,526	0/0:17,0:17:5.96:0,6,44	0/0:24,0:23:32.42:0,32,409	0/0:8,0:8:13.82:0,14,156	0/0:21,0:21:35.96:0,36,399	0/0:28,0:27:69.97:0,70,778	0/1:18,0:18:24.80:25,0,68	0/0:16,0:16:22.05:0,22,285	0/0:20,0:18:41.64:0,42,399	0/0:30,0:30:38.74:0,39,451	0/0:20,0:20:23.20:0,23,463	0/0:18,0:18:25.88:0,26,332	0/1:20,0:20:16.25:16,0,17	0/1:7,0:7:31.30:38,0,31	0/0:25,0:24:58.15:0,58,703	0/0:22,0:22:36.26:0,36,532	0/1:13,13:27:99:144,0,123	0/0:9,0:8:21.34:0,21,225
chr10	33996824	.	T	TGTGTGA	2318.70	PASS	AB=0.820;AC=20;AF=0.370;AN=54;BaseQRankSum=0.863;DP=580;FS=16.141;HRun=0;HaplotypeScore=135.7870;InbreedingCoeff=-0.2542;MQ=55.17;MQ0=6;MQRankSum=-3.010;QD=5.61;ReadPosRankSum=-2.034;VQSLOD=1.2864;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:22:28.42:334,28,0	0/1:2,0:9:1.62:2,0,84	0/0:11,0:5:5.39:0,5,71	./.	0/1:4,15:25:40.35:97,0,40	0/1:8,20:35:30.43:174,0,30	0/1:12,15:30:8.21:155,0,8	0/1:23,0:23:20.95:21,0,459	0/1:5,18:28:2.32:559,0,2	0/1:25,0:25:0.94:1,0,625	0/1:17,0:28:53.19:53,0,410	0/1:17,0:17:8.38:98,0,8	0/0:13,0:25:40.80:0,41,479	0/0:4,0:7:10.57:0,11,122	0/0:11,0:24:37.74:0,38,542	0/0:21,0:25:17.46:0,17,724	0/1:18,0:18:0.32:645,0,0	0/0:8,0:17:22.62:0,23,309	0/1:18,0:16:78.73:79,0,196	0/0:21,0:30:22.76:0,23,470	0/1:14,0:22:13.35:13,0,465	0/0:11,0:17:26.09:0,26,358	0/1:11,0:22:16.91:40,0,17	0/1:7,0:7:11.03:62,0,11	0/1:25,0:24:26.22:26,0,614	0/1:16,0:23:72.01:72,0,446	0/1:26,0:26:37.92:38,0,256	0/1:9,0:8:2.90:3,0,296
chr10	33997094	.	TG	T	3056.04	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=7.407;DP=504;FS=25.258;HRun=8;HaplotypeScore=54.2688;InbreedingCoeff=0.9955;MQ=74.83;MQ0=0;MQRankSum=0.574;QD=21.22;ReadPosRankSum=2.863;VQSLOD=2.1584;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,32:36:78.12:753,78,0	0/0:6,0:6:18.06:0,18,217	0/0:21,0:20:48.01:0,48,494	0/0:12,0:12:24.03:0,24,266	1/1:4,16:20:45.07:434,45,0	1/1:4,18:22:42.06:406,42,0	1/1:0,15:15:36.06:348,36,0	0/0:24,0:24:54.15:0,54,639	1/1:2,28:30:84.13:811,84,0	0/0:18,0:18:42.11:0,42,489	0/0:22,0:22:60.15:0,60,689	0/0:10,0:10:24.06:0,24,275	0/0:13,0:13:30.08:0,30,349	0/0:14,0:14:36.11:0,36,435	0/0:16,0:16:45.13:0,45,533	0/0:10,0:10:30.08:0,30,353	1/1:2,19:21:51.08:492,51,0	0/0:10,0:10:21.06:0,21,254	0/0:14,0:14:36.10:0,36,425	0/0:26,0:27:75.06:0,75,846	0/0:22,0:22:63.16:0,63,728	0/0:17,0:17:45.12:0,45,530	0/0:14,0:14:30.09:0,30,362	0/0:8,0:8:21.04:0,21,231	0/0:25,0:25:66.20:0,66,797	0/0:19,0:19:54.13:0,54,622	0/0:24,0:24:66.20:0,66,793	0/0:14,0:14:39.10:0,39,459
chr10	33997130	.	G	GA	799.70	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.010;DP=463;FS=2.660;HRun=7;HaplotypeScore=56.7640;InbreedingCoeff=0.9787;MQ=72.43;MQ0=0;MQRankSum=-0.604;QD=26.66;ReadPosRankSum=-0.591;VQSLOD=4.0943;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:66.09:0,66,632	0/0:9,0:9:24.04:0,24,232	0/0:11,0:11:21.01:0,21,195	0/0:7,0:8:11.38:0,11,94	0/0:18,0:18:39.05:0,39,377	0/0:19,0:19:45.06:0,45,429	0/0:18,0:18:48.06:0,48,457	0/0:30,0:30:78.12:0,78,753	0/0:19,0:19:54.09:0,54,521	0/0:24,0:24:57.08:0,57,550	0/0:17,0:17:48.07:0,48,458	1/1:2,9:11:27.08:326,27,0	0/0:18,0:18:48.08:0,48,464	0/0:14,0:14:42.07:0,42,405	0/0:12,0:12:36.06:0,36,348	0/0:10,0:10:21.02:0,21,203	0/0:18,0:18:51.05:0,51,485	0/0:9,0:9:27.04:0,27,261	0/0:10,0:10:18.01:0,18,170	0/0:29,0:29:72.09:0,72,690	0/0:14,0:14:33.02:0,33,311	0/0:15,0:15:39.04:0,39,370	1/1:2,9:11:27.08:326,27,0	1/1:0,8:8:24.07:290,24,0	0/0:21,0:21:45.06:0,45,435	0/0:24,0:24:66.10:0,66,637	0/0:25,0:25:66.07:0,66,629	0/0:9,0:9:27.04:0,27,261
chr10	33998021	.	T	TG	21731.39	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=3.697;DP=560;FS=7.886;HRun=0;HaplotypeScore=151.7281;InbreedingCoeff=0.9871;MQ=92.70;MQ0=0;MQRankSum=-11.184;QD=42.69;ReadPosRankSum=6.592;VQSLOD=2.9999;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,16:18:45.13:693,45,0	1/1:1,5:6:15.05:240,15,0	0/0:23,0:23:63.14:0,63,828	0/0:28,0:28:74.72:0,75,895	1/1:3,17:20:45.15:718,45,0	1/1:3,25:28:78.27:1231,78,0	1/1:1,27:28:72.25:1148,72,0	1/1:2,20:22:66.23:1055,66,0	1/1:1,13:14:39.13:622,39,0	1/1:1,25:26:72.25:1152,72,0	1/1:2,14:16:39.13:620,39,0	1/1:0,19:19:45.15:719,45,0	1/1:2,24:26:66.19:1045,66,0	1/1:0,29:29:84.29:1343,84,0	1/1:1,22:23:63.21:1007,63,0	1/1:0,21:21:60.20:959,60,0	1/1:0,15:15:42.14:671,42,0	1/1:1,15:16:42.14:672,42,0	1/1:0,12:12:36.12:576,36,0	1/1:1,17:18:39.13:623,39,0	1/1:0,35:35:96.33:1535,96,0	1/1:0,16:16:45.15:719,45,0	1/1:0,14:14:42.14:670,42,0	1/1:1,17:18:51.17:815,51,0	1/1:0,12:12:27.09:432,27,0	1/1:0,24:24:69.21:1079,69,0	1/1:1,23:24:69.24:1102,69,0	1/1:0,9:9:18.06:287,18,0
chr10	33998055	.	AAAGT	A	4449.26	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=3.225;DP=616;FS=4.511;HRun=0;HaplotypeScore=205.9888;InbreedingCoeff=0.9758;MQ=94.95;MQ0=0;MQRankSum=-12.778;QD=38.69;ReadPosRankSum=-0.528;VQSLOD=4.3047;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,21:25:48.08:802,48,0	0/0:7,0:7:18.06:0,18,451	0/0:33,0:33:74.46:0,74,1779	0/0:28,0:28:60.15:0,60,1449	1/1:3,17:20:42.04:664,42,0	1/1:3,17:20:48.16:872,48,0	1/1:2,21:23:63.13:1070,63,0	0/0:34,0:34:99:0,102,2553	1/1:1,11:12:30.07:511,30,0	0/0:31,0:31:90.31:0,90,2345	0/0:22,0:22:66.21:0,66,1627	0/0:22,0:22:45.15:0,45,1150	0/0:21,0:21:54.17:0,54,1330	0/0:28,0:28:75.26:0,75,1942	0/0:25,0:25:60.21:0,60,1568	0/0:19,1:20:5.69:0,6,1428	1/1:3,12:15:33.01:530,33,0	0/0:13,0:13:30.09:0,30,694	0/0:17,0:17:48.15:0,48,1188	0/0:20,0:20:57.20:0,57,1425	0/0:33,0:33:87.28:0,87,2213	0/0:18,0:18:51.17:0,51,1336	0/0:17,0:17:45.15:0,45,1129	0/0:22,0:22:60.21:0,60,1572	0/0:15,0:15:39.13:0,39,1022	0/0:29,0:29:84.29:0,84,2191	0/0:30,0:29:81.26:0,81,2042	0/0:16,0:16:33.11:0,33,861
chr10	33998142	.	G	GA	17004.17	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=0.145;DP=557;FS=4.127;HRun=2;HaplotypeScore=129.9757;InbreedingCoeff=0.9396;MQ=74.09;MQ0=0;MQRankSum=-6.617;QD=32.14;ReadPosRankSum=5.044;VQSLOD=4.2394;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,27:30:84.26:1072,84,0	1/1:1,11:12:24.08:311,24,0	0/0:13,0:13:36.07:0,36,406	0/0:15,0:14:32.67:0,33,343	1/1:6,14:20:40.68:506,41,0	1/1:3,23:26:62.12:824,62,0	1/1:5,22:27:73.10:910,73,0	1/1:3,25:28:74.82:936,75,0	1/1:2,15:17:44.02:571,44,0	1/1:0,13:13:39.11:496,39,0	1/1:1,15:16:42.12:523,42,0	1/1:1,16:17:35.85:461,36,0	1/1:1,10:11:30.98:397,31,0	1/1:1,24:26:65.78:808,66,0	1/1:3,29:32:84.27:1103,84,0	1/1:3,11:14:32.58:427,33,0	1/1:3,24:27:72.20:935,72,0	1/1:3,12:15:30.10:387,30,0	1/1:1,12:13:36.57:452,37,0	1/1:1,26:27:75.07:899,75,0	1/1:3,22:25:59.33:764,59,0	1/1:1,25:26:69.22:890,69,0	1/1:1,10:11:24.08:311,24,0	1/1:0,19:19:51.17:667,51,0	1/1:1,19:20:56.95:736,57,0	1/1:2,18:20:54.16:687,54,0	1/1:4,25:30:66.21:854,66,0	1/1:3,4:7:5.37:78,5,0
chr10	33999467	.	A	AC	24056.24	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-2.105;DP=719;FS=0.551;HRun=3;HaplotypeScore=85.8939;InbreedingCoeff=0.9983;MQ=91.93;MQ0=0;MQRankSum=-11.452;QD=36.39;ReadPosRankSum=7.384;VQSLOD=4.2322;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,40:46:99:1552,111,0	1/1:0,11:11:27.09:378,27,0	0/0:35,0:36:77.36:0,77,1001	0/0:22,0:22:53.83:0,54,616	1/1:1,24:25:72.02:979,72,0	1/1:1,27:28:75.25:1050,75,0	1/1:2,27:29:63.21:882,63,0	1/1:2,26:28:78.24:1053,78,0	1/1:0,23:23:63.21:881,63,0	1/1:1,24:25:72.21:984,72,0	1/1:0,22:22:63.21:882,63,0	1/1:2,17:19:44.94:600,45,0	1/1:0,27:27:78.26:1091,78,0	1/1:0,24:24:60.20:840,60,0	1/1:2,22:24:60.20:840,60,0	1/1:0,16:16:45.15:630,45,0	1/1:1,27:28:72.24:1008,72,0	1/1:0,12:12:33.11:462,33,0	1/1:4,23:27:72.24:998,72,0	1/1:0,30:30:87.25:1194,87,0	1/1:2,42:44:99:1638,117,0	1/1:1,25:26:69.23:959,69,0	1/1:3,29:33:87.29:1211,87,0	1/1:0,25:25:51.17:714,51,0	1/1:1,23:24:60.20:840,60,0	1/1:1,20:21:60.20:840,60,0	1/1:3,32:35:87.29:1214,87,0	1/1:0,8:8:24.08:335,24,0
chr10	33999982	.	TA	T	21033.88	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=1.155;DP=711;FS=2.713;HRun=4;HaplotypeScore=109.0006;InbreedingCoeff=0.9972;MQ=87.10;MQ0=0;MQRankSum=-10.683;QD=31.73;ReadPosRankSum=7.063;VQSLOD=3.8891;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,45:45:99:1368,114,0	1/1:0,10:10:27.08:324,27,0	0/0:24,0:24:52.41:0,52,822	0/0:24,0:24:64.07:0,64,853	1/1:1,32:33:90.23:1063,90,0	1/1:1,37:38:99:1188,99,0	1/1:2,34:36:81.25:972,81,0	1/1:2,38:40:99:1331,111,0	1/1:2,27:29:78.24:936,78,0	1/1:1,24:25:72.20:851,72,0	1/1:0,18:18:54.12:632,54,0	1/1:1,22:23:66.20:792,66,0	1/1:0,24:24:66.20:792,66,0	1/1:1,24:25:66.20:792,66,0	1/1:0,20:20:60.18:720,60,0	1/1:0,17:17:45.14:540,45,0	1/1:0,38:38:99:1260,105,0	1/1:0,11:11:33.10:395,33,0	1/1:3,19:22:40.44:654,40,0	1/1:1,20:21:51.16:612,51,0	1/1:3,31:34:84.26:1008,84,0	1/1:0,20:20:45.14:540,45,0	1/1:0,23:23:69.21:828,69,0	1/1:1,26:27:63.19:756,63,0	1/1:0,25:25:63.19:755,63,0	1/1:0,19:19:57.15:670,57,0	1/1:2,30:32:84.26:1006,84,0	1/1:1,7:8:21.06:252,21,0
chr10	34000629	.	C	CA	19602.04	PASS	AB=1.000;AC=53;AF=0.946;AN=56;BaseQRankSum=-7.060;DP=664;FS=2.410;HRun=6;HaplotypeScore=58.7990;InbreedingCoeff=0.6444;MQ=83.46;MQ0=0;MQRankSum=-9.165;QD=30.72;ReadPosRankSum=5.680;VQSLOD=4.9509;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,29:31:87.28:1097,87,0	1/1:0,13:13:30.10:378,30,0	0/0:26,0:25:59.03:0,59,595	0/1:18,0:17:37.27:37,0,168	1/1:2,26:28:75.11:892,75,0	1/1:2,37:38:99:1361,108,0	1/1:2,18:20:51.16:643,51,0	1/1:5,26:31:78.14:888,78,0	1/1:4,16:20:45.14:568,45,0	1/1:2,31:33:90.28:1122,90,0	1/1:1,30:31:90.25:1115,90,0	1/1:2,16:18:30.10:378,30,0	1/1:1,10:11:21.07:265,21,0	1/1:0,18:18:51.16:643,51,0	1/1:2,21:23:57.18:719,57,0	1/1:3,22:25:57.18:719,57,0	1/1:0,16:16:45.14:567,45,0	1/1:1,15:16:33.11:416,33,0	1/1:4,22:26:69.16:816,69,0	1/1:2,31:33:90.29:1135,90,0	1/1:1,11:12:24.08:303,24,0	1/1:3,34:37:90.29:1135,90,0	1/1:1,23:24:66.21:822,66,0	1/1:1,16:17:45.14:568,45,0	1/1:4,17:21:42.13:530,42,0	1/1:3,29:32:87.20:1049,87,0	1/1:2,27:29:75.24:946,75,0	1/1:0,16:16:39.12:492,39,0
chr10	34000856	.	T	TCC	426.46	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.651;DP=575;FS=4.640;HRun=1;HaplotypeScore=74.4760;InbreedingCoeff=0.9894;MQ=74.86;MQ0=0;MQRankSum=-4.559;QD=28.43;ReadPosRankSum=-0.831;VQSLOD=2.6350;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,9:15:30.10:521,30,0	0/0:10,0:10:30.10:0,30,459	0/0:9,0:9:27.07:0,27,366	0/0:16,0:16:40.76:0,41,596	0/0:20,0:20:57.19:0,57,873	0/0:26,0:26:72.24:0,72,1103	0/0:13,0:13:39.13:0,39,597	0/0:39,0:39:99:0,114,1743	0/0:23,0:23:69.22:0,69,1034	0/0:28,0:28:81.27:0,81,1241	0/0:34,0:34:99:0,102,1527	0/0:16,0:16:42.14:0,42,643	0/0:19,0:19:54.15:0,54,781	0/0:18,0:18:51.17:0,51,776	0/0:13,0:13:39.13:0,39,597	0/0:21,0:21:60.20:0,60,917	0/0:13,0:13:39.13:0,39,597	0/0:11,0:11:33.11:0,33,498	0/0:17,0:17:51.15:0,51,754	0/0:31,0:31:84.73:0,85,1244	0/0:6,0:6:18.06:0,18,276	0/0:27,0:27:78.26:0,78,1193	0/0:26,0:26:78.26:0,78,1195	0/0:12,0:12:36.12:0,36,551	0/0:34,0:34:99:0,102,1534	0/0:25,0:25:72.24:0,72,1102	0/0:33,0:33:99:0,99,1509	0/0:20,0:20:60.14:0,60,844
chr10	34001642	.	A	AC	2556.66	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.871;DP=648;FS=2.198;HRun=4;HaplotypeScore=70.2019;InbreedingCoeff=0.9994;MQ=78.27;MQ0=0;MQRankSum=-0.979;QD=36.01;ReadPosRankSum=3.425;VQSLOD=4.0521;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:80.03:0,80,889	0/0:9,0:9:27.08:0,27,306	0/0:24,0:23:57.08:0,57,600	0/0:29,0:29:75.14:0,75,831	0/0:27,0:27:69.16:0,69,761	0/0:23,0:23:63.14:0,63,700	0/0:30,0:30:84.21:0,84,932	0/0:29,0:29:84.23:0,84,945	0/0:28,0:28:81.20:0,81,898	0/0:26,0:26:75.21:0,75,842	0/0:16,0:16:42.12:0,42,477	1/1:0,24:24:69.23:944,69,0	0/0:22,0:22:63.18:0,63,715	0/0:25,0:25:72.20:0,72,817	0/0:24,0:24:69.18:0,69,773	0/0:26,0:26:72.20:0,72,816	0/0:23,0:23:69.20:0,69,783	0/0:11,0:11:33.09:0,33,372	0/0:19,0:19:57.14:0,57,630	0/0:17,0:17:48.13:0,48,541	0/0:28,0:28:75.20:0,75,841	0/0:23,0:23:66.19:0,66,749	1/1:1,25:26:69.23:943,69,0	1/1:2,19:21:60.20:813,60,0	0/0:27,0:27:75.18:0,75,828	0/0:29,0:29:78.22:0,78,884	0/0:18,0:18:51.14:0,51,578	0/0:11,0:11:33.09:0,33,374
chr10	34001847	.	T	TA	15291.04	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-3.190;DP=601;FS=8.801;HRun=2;HaplotypeScore=144.8248;InbreedingCoeff=0.9976;MQ=76.43;MQ0=0;MQRankSum=-3.572;QD=30.58;ReadPosRankSum=0.971;VQSLOD=3.4402;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:75.17:0,75,417	1/1:1,10:11:24.55:301,25,0	0/0:17,0:17:45.14:0,45,558	0/0:8,0:8:18.05:0,18,210	1/1:5,37:42:95.53:1129,96,0	1/1:1,14:15:42.13:522,42,0	1/1:1,12:13:30.10:378,30,0	1/1:6,33:40:68.80:1047,69,0	1/1:3,20:23:57.18:717,57,0	1/1:10,17:27:58.70:761,59,0	1/1:1,20:21:51.93:597,52,0	0/0:15,0:15:31.04:0,31,155	1/1:0,17:17:45.14:561,45,0	1/1:2,17:19:46.88:554,47,0	1/1:0,22:22:60.19:762,60,0	1/1:2,20:22:60.66:757,61,0	1/1:4,24:28:60.88:876,61,0	1/1:2,12:14:30.10:379,30,0	1/1:6,10:17:36.37:428,36,0	1/1:3,24:27:68.84:856,69,0	1/1:1,26:27:78.25:986,78,0	1/1:2,23:25:66.20:817,66,0	0/0:19,0:19:52.34:0,52,317	0/0:12,0:12:31.63:0,32,164	1/1:1,23:24:60.19:753,60,0	1/1:6,21:27:58.12:840,58,0	1/1:3,20:23:64.08:778,64,0	1/1:0,16:16:39.12:492,39,0
chr10	34001849	.	AG	A	7161.28	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=5.461;DP=591;FS=8.606;HRun=1;HaplotypeScore=161.8234;InbreedingCoeff=0.9337;MQ=76.67;MQ0=0;MQRankSum=-2.710;QD=14.56;ReadPosRankSum=-0.226;VQSLOD=3.8219;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:27.56:0,28,223	1/1:10,0:10:25.07:131,25,0	0/0:17,0:17:48.15:0,48,697	0/0:8,0:8:18.06:0,18,268	1/1:40,0:40:98.65:539,99,0	1/1:16,0:16:43.86:244,44,0	1/1:13,0:13:32.20:191,32,0	1/1:38,1:39:81.69:537,82,0	1/1:23,0:23:57.03:314,57,0	1/1:25,1:26:66.11:432,66,0	1/1:22,0:22:52.24:319,52,0	0/0:14,0:14:0.09:0,0,62	1/1:17,0:17:41.90:250,42,0	1/1:20,0:20:49.19:308,49,0	1/1:22,0:22:54.19:312,54,0	1/1:23,0:23:67.40:410,67,0	1/1:29,0:29:62.45:401,62,0	1/1:13,0:13:31.58:171,32,0	1/1:16,0:16:39.38:228,39,0	1/1:27,0:27:73.27:424,73,0	1/1:26,0:26:75.23:400,75,0	1/1:25,0:25:63.91:339,64,0	0/0:19,0:19:24.44:0,24,190	0/0:12,0:12:10.54:0,11,82	1/1:23,0:23:57.81:325,58,0	1/1:24,1:25:61.08:369,61,0	1/1:22,1:23:61.06:315,61,0	1/1:14,0:14:37.62:201,38,0
chr10	34002199	.	G	GA	1588.14	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-8.499;DP=585;FS=2.575;HRun=8;HaplotypeScore=58.4905;InbreedingCoeff=0.9931;MQ=66.45;MQ0=1;MQRankSum=0.867;QD=27.38;ReadPosRankSum=0.150;VQSLOD=4.2455;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,132,1208	0/0:7,0:7:18.01:0,18,165	0/0:13,0:10:18.01:0,18,164	0/0:15,0:14:28.52:0,29,242	0/0:30,0:30:78.04:0,78,713	0/0:14,0:14:36.02:0,36,330	0/0:18,0:18:42.02:0,42,384	0/0:33,0:33:87.04:0,87,796	0/0:20,0:20:60.03:0,60,549	0/0:19,0:19:54.03:0,54,494	0/0:19,0:19:45.02:0,45,411	1/1:2,16:18:48.14:554,48,0	0/0:23,0:23:63.03:0,63,577	0/0:20,0:20:54.03:0,54,494	0/0:25,0:25:69.04:0,69,631	0/0:11,0:11:24:0,24,220	0/0:20,0:20:45.01:0,45,411	0/0:19,0:19:54:0,54,488	0/0:27,0:27:56.99:0,57,514	0/0:21,0:21:51.02:0,51,467	0/0:17,0:17:42:0,42,379	0/0:25,0:25:63.01:0,63,572	1/1:2,18:20:51.15:588,51,0	1/1:1,19:20:51.15:589,51,0	0/0:19,0:19:51.03:0,51,467	0/0:25,0:25:72.03:0,72,659	0/0:20,0:20:57.02:0,57,522	0/0:20,0:20:62.07:0,62,555
chr10	34002961	.	G	GAA	8082.60	PASS	AB=0.634;AC=48;AF=0.857;AN=56;BaseQRankSum=-5.159;DP=455;FS=0.000;HRun=11;HaplotypeScore=65.8128;InbreedingCoeff=0.5648;MQ=61.67;MQ0=5;MQRankSum=-1.551;QD=20.83;ReadPosRankSum=-1.639;VQSLOD=3.6714;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:33:61.45:0,61,619	1/1:3,5:8:12.04:173,12,0	0/0:16,0:11:15.84:0,16,215	0/0:16,0:11:23.87:0,24,198	1/1:5,8:17:2.94:312,3,0	1/1:2,16:18:19.01:599,19,0	1/1:2,7:9:24.08:342,24,0	1/1:11,9:22:36.01:405,36,0	1/1:5,8:14:21.03:281,21,0	1/1:8,7:16:0.43:280,0,0	0/1:9,5:16:2.62:233,0,3	0/1:4,12:15:2.01:320,0,2	1/1:4,3:10:16.87:153,17,0	1/1:5,7:13:20.56:264,21,0	1/1:4,6:14:20.04:229,20,0	1/1:4,7:13:23.05:278,23,0	1/1:6,17:29:26.02:599,26,0	1/1:5,11:18:5.86:329,6,0	1/1:8,4:11:12.04:174,12,0	1/1:5,11:18:5.96:351,6,0	1/1:5,6:12:17.53:208,18,0	1/1:4,4:9:6.02:87,6,0	1/1:2,7:13:16.77:309,17,0	1/1:2,14:18:9:423,9,0	1/1:4,15:20:38.62:525,39,0	1/1:7,17:27:59.08:717,59,0	1/1:4,10:15:35.08:447,35,0	1/1:1,4:5:3.01:43,3,0
chr10	34003102	.	TA	T	1303.10	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=9.617;DP=430;FS=9.266;HRun=1;HaplotypeScore=45.4738;InbreedingCoeff=0.7994;MQ=60.45;MQ0=1;MQRankSum=3.723;QD=25.55;ReadPosRankSum=1.473;VQSLOD=2.5949;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:51.15:0,51,790	0/0:10,0:10:30.10:0,30,475	0/1:6,0:4:5.60:6,0,132	0/0:5,0:5:6.02:0,6,96	0/0:21,0:21:51.16:0,51,791	0/0:13,0:13:36.12:0,36,575	0/0:2,0:2:6.02:0,6,96	0/0:35,0:35:99:0,102,1604	0/0:9,0:9:21.07:0,21,336	0/0:21,0:21:63.16:0,63,939	0/0:24,0:24:57.18:0,57,872	1/1:1,21:22:48.14:649,48,0	0/0:9,0:9:21.07:0,21,330	0/0:9,0:9:27.09:0,27,429	0/0:14,0:14:39.11:0,39,597	0/0:15,0:15:45.15:0,45,718	0/0:21,0:20:60.20:0,60,959	0/0:15,0:15:45.15:0,45,714	0/0:15,0:15:45.11:0,45,624	0/0:25,0:25:75.26:0,75,1190	0/0:11,0:11:33.11:0,33,524	0/0:5,0:5:12.03:0,12,169	1/1:0,15:15:33.11:459,33,0	1/1:0,8:8:24.08:334,24,0	0/0:16,0:15:42.11:0,42,644	0/0:23,0:23:66.22:0,66,1056	0/0:23,0:23:66.22:0,66,1046	0/0:17,0:17:48.16:0,48,767
chr10	34003251	.	CT	C	6868.38	PASS	AB=0.585;AC=45;AF=0.804;AN=56;BaseQRankSum=-3.971;DP=468;FS=43.995;HRun=11;HaplotypeScore=51.5437;InbreedingCoeff=0.1533;MQ=57.65;MQ0=13;MQRankSum=0.980;QD=15.90;ReadPosRankSum=4.171;VQSLOD=2.6240;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:3,0:11:12.66:28,0,13	1/1:1,6:7:11.98:98,12,0	0/0:26,0:15:25.78:0,26,187	0/0:10,0:3:5.93:0,6,48	0/1:7,20:26:38.26:336,0,38	1/1:5,12:19:12.70:277,13,0	0/1:4,6:9:42.95:102,0,43	1/1:5,31:38:93.90:741,94,0	0/1:2,7:10:7.59:131,0,8	1/1:4,23:28:70.94:570,71,0	1/1:5,17:22:16.09:337,16,0	1/1:2,14:16:35.96:295,36,0	1/1:2,11:13:32.95:271,33,0	1/1:2,12:14:35.95:295,36,0	0/1:8,12:20:99:223,0,108	1/1:1,7:8:17.98:148,18,0	1/1:5,11:16:0.99:214,1,0	1/1:2,6:8:17.98:148,18,0	1/1:5,13:15:38.90:312,39,0	1/1:3,27:30:16.97:551,17,0	1/1:1,8:9:23.97:197,24,0	1/1:1,10:11:23.97:197,24,0	1/1:5,13:18:32.96:271,33,0	0/1:2,8:11:2.96:174,0,3	0/1:6,14:20:99:223,0,108	1/1:5,16:22:20.98:368,21,0	1/1:4,15:18:12.96:313,13,0	1/1:0,7:7:5.99:49,6,0
chr10	34004488	.	CT	C	7611.50	PASS	AB=0.958;AC=54;AF=0.964;AN=56;BaseQRankSum=-2.932;DP=422;FS=0.000;HRun=9;HaplotypeScore=36.6145;InbreedingCoeff=0.3447;MQ=39.85;MQ0=81;MQRankSum=-1.039;QD=18.04;ReadPosRankSum=2.434;VQSLOD=4.3789;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,13:14:39.01:357,39,0	1/1:0,8:7:18.01:164,18,0	0/1:10,1:4:2.78:3,0,37	0/1:6,0:3:0.06:10,0,0	1/1:1,13:13:39.02:357,39,0	1/1:5,13:11:27.01:246,27,0	1/1:1,11:11:27.01:247,27,0	1/1:2,17:14:42.02:384,42,0	1/1:1,18:17:45.02:412,45,0	1/1:3,15:14:39.02:357,39,0	1/1:0,12:12:27.01:247,27,0	1/1:0,15:14:36.02:329,36,0	1/1:4,13:12:30.02:274,30,0	1/1:2,13:11:27.01:246,27,0	1/1:5,17:16:36.02:329,36,0	1/1:3,8:7:15.01:137,15,0	1/1:2,15:15:39.02:357,39,0	1/1:1,15:13:30.02:274,30,0	1/1:7,12:7:21.01:192,21,0	1/1:1,17:17:48.03:439,48,0	1/1:2,5:5:9:82,9,0	1/1:0,10:10:18.01:164,18,0	1/1:1,12:12:27.01:247,27,0	1/1:0,13:12:33.02:302,33,0	1/1:5,14:12:33.02:302,33,0	1/1:1,10:6:18.01:165,18,0	1/1:0,28:28:72.04:658,72,0	1/1:1,15:14:36.02:329,36,0
chr10	34012969	.	G	GT	22953.80	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-11.301;DP=663;FS=10.678;HRun=2;HaplotypeScore=56.2715;InbreedingCoeff=0.9984;MQ=88.22;MQ0=0;MQRankSum=-9.062;QD=38.58;ReadPosRankSum=4.621;VQSLOD=4.7041;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:60.19:0,60,744	1/1:0,12:12:33.11:475,33,0	0/0:26,0:26:75.20:0,75,907	0/0:21,0:22:55.59:0,56,637	1/1:0,33:33:96.24:1335,96,0	1/1:1,27:28:75.25:1080,75,0	1/1:0,14:14:33.11:475,33,0	1/1:3,22:25:63.19:870,63,0	1/1:1,22:23:66.22:950,66,0	1/1:1,31:32:93.30:1321,93,0	1/1:1,20:21:51.17:734,51,0	1/1:2,17:19:48.16:691,48,0	1/1:0,33:33:96.32:1378,96,0	1/1:1,20:22:63.21:900,63,0	1/1:0,28:28:78.26:1123,78,0	1/1:0,27:27:78.26:1123,78,0	1/1:2,23:25:66.22:950,66,0	1/1:1,17:18:42.14:605,42,0	1/1:2,17:19:51.17:735,51,0	1/1:0,24:24:69.18:969,69,0	1/1:1,20:21:60.20:851,60,0	1/1:3,26:29:72.24:1035,72,0	1/1:3,28:31:78.03:1117,78,0	1/1:1,21:22:54.18:778,54,0	1/1:1,17:18:48.16:691,48,0	1/1:0,26:26:78.23:1085,78,0	1/1:3,34:37:96.32:1380,96,0	1/1:0,8:8:21.07:302,21,0
chr10	34013471	.	C	CT	1608.67	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-8.151;DP=640;FS=6.133;HRun=8;HaplotypeScore=60.2518;InbreedingCoeff=0.9908;MQ=75.47;MQ0=0;MQRankSum=-2.114;QD=26.37;ReadPosRankSum=0.540;VQSLOD=4.4144;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:77.99:0,78,707	0/0:13,0:13:33.01:0,33,298	0/0:23,0:23:18.43:0,18,381	0/0:11,0:11:14.78:0,15,131	0/0:38,0:38:99:0,111,1011	0/0:14,0:14:36:0,36,325	0/0:18,0:18:51.01:0,51,462	0/0:33,0:34:74.04:0,74,662	0/0:15,0:15:45.02:0,45,412	0/0:26,0:26:69.04:0,69,632	0/0:30,0:30:84.03:0,84,769	1/1:2,20:22:57.17:658,57,0	0/0:19,0:19:48.02:0,48,439	0/0:10,0:10:27.01:0,27,247	0/0:24,0:24:72.04:0,72,659	0/0:14,0:14:36.02:0,36,329	0/0:18,0:18:54.01:0,54,488	0/0:16,0:16:45.02:0,45,412	0/0:19,0:19:41.60:0,42,384	0/0:34,0:34:90.01:0,90,817	0/0:29,0:29:68.99:0,69,620	0/0:26,0:26:75.04:0,75,686	1/1:3,21:24:54.05:609,54,0	1/1:0,15:15:42.12:485,42,0	0/0:33,0:34:99:0,101,908	0/0:34,0:34:87.03:0,87,796	0/0:29,0:29:84.05:0,84,768	0/0:19,0:19:54.03:0,54,494
chr10	34015034	.	CAA	C	3423.74	PASS	AB=0.758;AC=46;AF=0.821;AN=56;BaseQRankSum=-4.049;DP=452;FS=0.000;HRun=16;HaplotypeScore=63.0531;InbreedingCoeff=0.3713;MQ=52.91;MQ0=10;MQRankSum=2.869;QD=8.11;ReadPosRankSum=3.670;VQSLOD=0.3633;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:39:38.73:224,39,0	1/1:1,5:6:8.91:75,9,0	0/1:6,0:2:6.73:7,0,22	0/0:1,0:2:3.37:0,3,9	0/1:9,6:20:4.05:64,0,4	1/1:5,10:20:20.27:232,20,0	1/1:7,13:20:35.39:287,35,0	1/1:11,5:16:11.43:86,11,0	1/1:8,9:16:20.97:216,21,0	0/1:11,7:17:15.53:151,0,16	1/1:8,10:22:14.42:154,14,0	0/0:6,0:10:10.08:0,10,48	1/1:6,3:7:2.81:25,3,0	1/1:6,6:14:11.38:86,11,0	1/1:3,8:11:17.85:150,18,0	1/1:5,9:15:20.60:161,21,0	1/1:5,9:14:19.40:160,19,0	1/1:4,12:19:0.67:201,1,0	1/1:2,5:8:11.62:129,12,0	1/1:7,7:14:8.76:117,9,0	1/1:10,12:26:32.09:242,32,0	1/1:11,11:23:31.73:280,32,0	0/1:11,1:19:4.02:4,0,50	0/0:7,0:18:6.32:0,6,105	1/1:5,0:8:8.10:35,8,0	1/1:13,9:21:11.52:224,12,0	1/1:6,0:8:2.64:12,3,0	1/1:8,5:13:11.86:100,12,0
chr10	34015231	.	C	CACACAT	12086.78	PASS	AB=0.621;AC=45;AF=0.804;AN=56;BaseQRankSum=-1.557;DP=837;FS=4.416;HRun=0;HaplotypeScore=216.9746;InbreedingCoeff=0.3222;MQ=42.57;MQ0=27;MQRankSum=-0.494;QD=17.52;ReadPosRankSum=1.717;VQSLOD=4.3079;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:13,24:42:7.10:121,0,7	1/1:0,8:8:2.77:102,3,0	0/0:67,0:17:26.64:0,27,408	0/0:77,0:23:26.87:0,27,518	0/1:1,16:17:0:0,0,0	1/1:3,18:23:3.48:102,3,0	0/1:2,19:25:0.07:0,0,0	1/1:46,0:43:94.35:1761,94,0	1/1:10,14:24:24.07:655,24,0	1/1:14,21:35:62.72:1325,63,0	0/1:2,13:16:0:0,0,0	1/1:23,0:23:17.88:332,18,0	1/1:2,22:24:17.94:533,18,0	1/1:4,25:30:3.48:101,3,0	1/1:6,28:36:3:101,3,0	1/1:18,8:26:36.01:622,36,0	1/1:4,17:23:8.85:294,9,0	1/1:12,3:15:39.10:837,39,0	1/1:9,21:27:66.09:1060,66,0	1/1:7,4:11:6.02:128,6,0	0/1:22,45:64:39.02:39,0,43	1/1:5,22:28:2.90:41,3,0	0/1:16,0:16:2.27:115,0,2	1/1:29,0:29:27:445,27,0	0/1:6,14:18:14.26:72,0,14	1/1:6,27:34:81.27:2223,81,0	1/1:3,20:24:27.08:871,27,0	1/1:1,7:8:7.27:206,7,0
chr10	34015241	.	C	CAT	2569.28	PASS	AB=0.979;AC=26;AF=0.464;AN=56;BaseQRankSum=5.572;DP=794;FS=21.256;HRun=0;HaplotypeScore=219.1898;InbreedingCoeff=-0.3138;MQ=41.15;MQ0=26;MQRankSum=-5.844;QD=4.73;ReadPosRankSum=5.876;VQSLOD=1.3851;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:39,0:39:7.97:8,0,60	0/1:8,0:8:17.33:17,0,27	0/0:46,0:10:26.61:0,27,401	0/0:69,0:17:35.82:0,36,489	0/0:21,0:21:6.47:0,6,88	1/1:20,0:20:2.97:23,3,0	0/0:25,1:26:3.01:0,3,46	0/1:52,0:49:99:279,0,600	0/1:27,0:27:70.48:70,0,212	0/1:33,0:30:99:195,0,341	0/1:16,0:16:0.93:1,0,41	1/1:8,14:22:12.05:288,12,0	0/1:27,0:26:86.87:99,0,87	0/1:30,0:29:4.55:5,0,80	0/1:33,0:32:13.94:14,0,61	0/1:26,1:27:99:155,0,117	0/1:20,0:20:29.83:51,0,30	0/1:16,0:16:99:161,0,134	0/1:21,0:18:99:161,0,139	0/1:11,0:11:15.09:15,0,53	0/0:59,0:55:18.03:0,18,226	0/0:30,0:30:0.78:0,1,137	0/1:11,5:17:4.13:119,0,4	1/1:19,10:28:27:394,27,0	0/1:24,0:21:22.97:23,0,152	0/1:33,2:35:70.22:469,0,70	0/1:27,0:27:77.70:128,0,78	1/1:8,0:8:8.90:54,9,0
chr10	34015635	.	T	TACACACAC	6342.46	PASS	AB=0.730;AC=49;AF=0.980;AN=50;DP=631;FS=0.000;HRun=0;HaplotypeScore=192.7319;InbreedingCoeff=0.0800;MQ=55.33;MQ0=17;QD=12.20;VQSLOD=3.2138;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:25:18.06:468,18,0	1/1:6,2:9:2.62:122,3,0	./.	./.	1/1:19,0:19:14.91:332,15,0	1/1:22,0:22:6.02:189,6,0	1/1:26,0:26:27.07:607,27,0	1/1:23,0:23:24.04:365,24,0	1/1:27,0:26:6.51:186,7,0	1/1:27,0:27:24.08:513,24,0	1/1:12,0:12:11.78:268,12,0	1/1:12,0:22:4.55:68,5,0	1/1:12,0:12:6.02:141,6,0	1/1:14,3:23:5.93:157,6,0	1/1:16,0:16:5.54:164,6,0	1/1:20,0:21:6:175,6,0	1/1:24,0:23:12.04:301,12,0	1/1:7,3:13:5.05:66,5,0	1/1:22,0:22:24.04:503,24,0	./.	1/1:30,0:29:9.03:190,9,0	0/1:17,0:27:0:0,0,0	1/1:15,0:15:11.60:204,12,0	1/1:23,0:37:10.14:70,10,0	1/1:15,1:16:3.01:122,3,0	1/1:23,0:23:39.11:739,39,0	1/1:8,3:16:3.01:122,3,0	1/1:12,0:13:12.04:269,12,0
chr10	34015652	.	A	ACACACACACA	5159.11	PASS	AB=1.000;AC=48;AF=0.960;AN=50;BaseQRankSum=-3.806;DP=652;FS=0.000;HRun=0;HaplotypeScore=180.1266;InbreedingCoeff=0.1308;MQ=47.91;MQ0=28;MQRankSum=3.026;QD=9.36;ReadPosRankSum=4.896;VQSLOD=3.3785;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:23:18.06:468,18,0	1/1:10,0:9:2.43:89,2,0	./.	./.	1/1:22,0:22:14.96:450,15,0	1/1:24,0:24:6.02:189,6,0	1/1:26,0:26:20.89:467,21,0	0/1:34,0:31:0:0,0,0	1/1:26,5:32:3.23:146,3,0	1/1:29,0:28:15.29:286,15,0	1/1:12,0:11:12.04:268,12,0	1/1:23,0:23:3.82:53,4,0	1/1:16,0:16:6.02:109,6,0	1/1:23,0:23:2:88,2,0	1/1:15,0:15:3.84:160,4,0	1/1:22,0:22:4.93:142,5,0	1/1:23,0:22:15.05:416,15,0	1/1:16,0:16:6.88:125,7,0	1/1:20,0:19:12.93:356,13,0	./.	1/1:26,0:25:9.03:190,9,0	0/1:27,0:27:0:0,0,0	1/1:13,0:13:11.35:203,11,0	1/1:41,0:41:7.50:80,8,0	1/1:14,0:14:2.84:90,3,0	1/1:24,0:24:28.48:457,28,0	1/1:22,0:21:3.01:91,3,0	1/1:13,0:13:12.04:236,12,0
chr10	34016022	.	TATGCATATAC	T	1394.49	PASS	AB=0.952;AC=7;AF=0.125;AN=56;BaseQRankSum=6.981;DP=576;FS=8.155;HRun=0;HaplotypeScore=164.6766;InbreedingCoeff=0.7221;MQ=68.61;MQ0=4;MQRankSum=-5.682;QD=27.34;ReadPosRankSum=1.233;VQSLOD=2.7555;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:51.17:0,51,2122	0/0:7,0:7:21.07:0,21,941	0/0:16,0:7:2.74:0,3,12	0/0:35,0:16:15.71:0,16,281	0/0:33,0:33:90.29:0,90,3989	0/0:17,0:17:51.17:0,51,2047	0/0:12,0:12:36.12:0,36,1118	0/0:33,0:33:96.32:0,96,3232	0/0:15,0:15:42.14:0,42,1632	0/0:46,0:46:99:0,138,6444	0/0:29,0:29:78.27:0,78,3091	1/1:0,11:11:18.06:571,18,0	0/0:19,0:19:51.16:0,51,1904	0/1:19,1:20:42.71:43,0,2197	0/0:19,0:19:57.19:0,57,2582	0/0:22,0:22:66.22:0,66,2617	0/0:13,0:13:36.10:0,36,1438	0/0:12,0:12:36.12:0,36,1478	0/0:10,0:10:27.08:0,27,651	0/0:34,0:34:87.30:0,87,4112	0/0:12,0:12:36.12:0,36,1505	0/0:19,0:19:54.19:0,54,2448	1/1:1,13:14:27.05:818,27,0	1/1:1,5:6:3.01:100,3,0	0/0:32,0:32:93.32:0,93,4147	0/0:23,0:23:66.22:0,66,2180	0/0:27,0:27:72.06:0,72,3549	0/0:19,0:19:51.17:0,51,2282
chr10	34016428	.	C	CAGCAGCTATG	74253.77	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-7.288;DP=748;FS=3.218;HRun=0;HaplotypeScore=223.0805;InbreedingCoeff=0.9798;MQ=78.98;MQ0=0;MQRankSum=-11.588;QD=108.08;ReadPosRankSum=5.815;VQSLOD=5.2310;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:12,25:39:84.29:4401,84,0	1/1:4,8:15:30.10:1595,30,0	0/0:30,0:30:54.05:0,54,2058	0/0:31,0:31:84.29:0,84,2425	1/1:13,22:40:57.74:3181,58,0	1/1:6,16:24:54.19:2781,54,0	1/1:20,20:41:96.33:4991,96,0	1/1:18,14:40:99:5128,120,0	1/1:6,21:29:63.22:3344,63,0	1/1:12,11:28:81.26:3384,81,0	1/1:8,12:22:39.13:2043,39,0	1/1:8,11:22:42.14:2220,42,0	1/1:10,13:29:57.20:3011,57,0	1/1:14,17:31:57.20:3027,57,0	1/1:9,22:34:75.26:3982,75,0	1/1:9,11:23:45.63:2387,46,0	1/1:6,11:19:45.15:2363,45,0	1/1:3,6:10:24.08:1202,24,0	1/1:18,11:37:93.29:3787,93,0	1/1:11,17:33:66.23:3296,66,0	1/1:6,4:14:14.77:797,15,0	1/1:15,12:29:46.93:2526,47,0	1/1:5,16:23:51.18:2687,51,0	1/1:3,6:12:15.05:795,15,0	1/1:8,7:16:30.10:1580,30,0	1/1:12,20:36:99:4310,99,0	1/1:10,20:32:87.30:4360,87,0	1/1:2,6:9:21.07:1076,21,0
chr10	34017855	.	ATT	A	6592.59	PASS	AB=0.709;AC=46;AF=0.821;AN=56;BaseQRankSum=-5.023;DP=451;FS=0.000;HRun=11;HaplotypeScore=78.2085;InbreedingCoeff=0.6991;MQ=61.20;MQ0=9;MQRankSum=2.456;QD=18.78;ReadPosRankSum=4.109;VQSLOD=3.9169;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:24:27.88:125,28,0	1/1:1,6:7:17.99:179,18,0	0/0:47,0:8:17.70:0,18,176	0/0:38,0:16:22.80:0,23,212	1/1:4,14:20:34.32:323,34,0	1/1:5,11:16:27.05:286,27,0	1/1:3,9:12:17.91:175,18,0	1/1:8,7:17:23.98:238,24,0	1/1:1,8:10:20.97:199,21,0	1/1:2,18:19:51.02:493,51,0	1/1:0,20:20:48.09:497,48,0	0/1:7,0:8:1.75:51,0,2	1/1:2,12:14:21.04:223,21,0	1/1:1,10:11:18.04:185,18,0	1/1:2,12:14:24.04:248,24,0	1/1:1,13:14:36.07:382,36,0	1/1:3,14:20:42.02:422,42,0	1/1:2,7:9:21.05:223,21,0	1/1:0,14:14:42.03:412,42,0	1/1:4,20:25:54.05:547,54,0	1/1:0,11:11:24.06:255,24,0	1/1:1,5:6:11.91:111,12,0	0/0:9,0:9:2.21:0,2,8	0/0:2,0:2:4.15:0,4,15	0/1:2,16:17:4.12:169,0,4	1/1:0,18:18:44.97:435,45,0	1/1:0,18:18:30.08:319,30,0	1/1:0,3:3:9.02:96,9,0
chr10	34017879	.	GGGGA	G	279.87	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.719;DP=489;FS=2.744;HRun=0;HaplotypeScore=128.6863;InbreedingCoeff=0.8882;MQ=65.61;MQ0=10;MQRankSum=-2.531;QD=12.72;ReadPosRankSum=0.398;VQSLOD=3.1038;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,14:22:23.99:373,24,0	0/0:9,0:9:27.08:0,27,488	0/0:55,0:14:33.74:0,34,506	0/0:43,0:18:11.30:0,11,499	0/0:21,0:21:60.14:0,60,1159	0/0:13,0:13:36.12:0,36,713	0/0:10,0:10:24.03:0,24,418	0/0:20,0:19:54.12:0,54,743	0/0:12,0:12:33.11:0,33,644	0/0:22,0:21:57.64:0,58,987	0/0:29,0:29:78.22:0,78,1430	0/0:12,0:12:33.01:0,33,628	0/0:14,0:14:36.11:0,36,633	0/0:12,0:12:30.57:0,31,549	0/0:14,0:14:33.52:0,34,584	0/0:17,0:17:48.16:0,48,945	0/0:20,0:20:54.61:0,55,995	0/0:8,0:8:24.08:0,24,452	0/0:21,0:21:60.65:0,61,1072	0/0:23,0:23:63.20:0,63,1197	0/0:13,0:13:33.11:0,33,637	0/0:10,0:10:27.05:0,27,511	0/0:11,0:11:21.04:0,21,338	0/0:5,0:5:14.85:0,15,213	0/0:16,0:16:36.08:0,36,690	0/0:17,0:17:50.81:0,51,855	0/0:16,0:16:42.13:0,42,778	0/0:3,0:3:9.03:0,9,177
chr10	34017882	.	GA	G	72.70	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=1.721;DP=459;FS=10.003;HRun=1;HaplotypeScore=100.7364;InbreedingCoeff=0.7439;MQ=65.56;MQ0=7;MQRankSum=-3.231;QD=4.85;ReadPosRankSum=-0.540;VQSLOD=-0.6240;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,1:15:23.56:166,24,0	0/0:10,0:10:26.35:0,26,161	0/0:43,0:13:30.08:0,30,257	0/0:30,1:14:6.98:0,7,175	0/0:20,0:20:51.17:0,51,332	0/0:14,0:14:36.28:0,36,235	0/0:10,0:10:25.04:0,25,152	0/0:21,0:20:51.59:0,52,414	0/0:13,0:13:29.25:0,29,151	0/0:20,0:19:36.79:0,37,280	0/0:28,0:28:58.68:0,59,415	0/0:13,0:13:29.80:0,30,192	0/0:14,0:14:21.62:0,22,158	0/0:11,0:11:19.60:0,20,96	0/0:14,0:14:30.15:0,30,202	0/0:17,0:17:41.41:0,41,222	0/0:18,1:19:41.91:0,42,276	0/0:9,1:10:6.75:0,7,121	0/0:22,0:22:54.46:0,54,427	0/0:21,0:21:50.68:0,51,300	0/0:14,0:14:28.94:0,29,184	0/0:10,0:10:20.55:0,21,162	0/0:9,0:9:11.30:0,11,118	0/0:4,0:4:11.32:0,11,78	0/0:17,0:17:38.66:0,39,285	0/0:18,0:18:43.54:0,44,310	0/0:17,0:17:37.77:0,38,226	0/0:3,0:3:8.61:0,9,46
chr10	34018102	.	C	CAAAA	7450.01	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-0.975;DP=376;FS=2.442;HRun=15;HaplotypeScore=96.9873;InbreedingCoeff=0.4799;MQ=58.84;MQ0=19;MQRankSum=-1.497;QD=23.07;ReadPosRankSum=-1.955;VQSLOD=3.6448;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:19:27.09:486,27,0	1/1:5,0:5:8.24:119,8,0	0/0:24,0:11:2.92:0,3,27	0/0:27,0:10:0.97:0,1,40	1/1:7,8:15:15.05:283,15,0	1/1:15,0:15:17.72:322,18,0	1/1:9,0:9:9.03:162,9,0	1/1:14,0:12:12.04:229,12,0	1/1:19,0:19:36.05:563,36,0	1/1:19,0:16:36.12:645,36,0	1/1:17,0:15:22.63:405,23,0	1/1:7,0:7:11.99:171,12,0	1/1:10,0:10:18.05:315,18,0	1/1:12,0:12:21.07:382,21,0	1/1:13,0:13:24.08:452,24,0	1/1:13,0:13:24.08:440,24,0	1/1:14,0:14:12.04:216,12,0	1/1:6,0:5:3.01:54,3,0	1/1:12,0:12:12:173,12,0	1/1:15,0:12:13.60:231,14,0	1/1:7,0:7:6.02:105,6,0	1/1:7,0:8:7.42:165,7,0	1/1:14,0:14:11.93:169,12,0	1/1:11,0:10:0.89:2,1,0	1/1:9,0:8:12.03:185,12,0	1/1:10,0:10:27.09:502,27,0	1/1:18,0:17:33.09:597,33,0	1/1:10,0:9:12.98:77,13,0
chr10	34019515	.	AT	A	10554.59	PASS	AB=0.763;AC=52;AF=0.929;AN=56;BaseQRankSum=-2.914;DP=586;FS=1.825;HRun=11;HaplotypeScore=61.6623;InbreedingCoeff=0.1574;MQ=71.79;MQ0=0;MQRankSum=-0.503;QD=18.01;ReadPosRankSum=4.514;VQSLOD=5.7402;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,16:18:47.94:394,48,0	1/1:2,5:8:17.01:129,17,0	0/1:12,0:11:8.70:9,0,53	0/1:14,1:12:4.36:4,0,201	1/1:3,19:22:18.93:362,19,0	1/1:4,24:28:62.91:517,63,0	1/1:4,13:17:38.94:320,39,0	1/1:6,19:25:56.89:468,57,0	1/1:3,41:44:99:927,99,0	1/1:3,17:20:50.88:412,51,0	1/1:3,16:19:47.91:394,48,0	1/1:3,16:20:21.25:282,21,0	1/1:4,17:21:12.96:313,13,0	1/1:4,28:32:74.89:616,75,0	1/1:2,28:30:80.90:665,81,0	1/1:2,24:27:38.97:515,39,0	1/1:3,24:29:44:546,44,0	1/1:1,12:13:35.96:295,36,0	1/1:5,15:20:44.90:366,45,0	1/1:6,20:26:50.87:419,51,0	1/1:2,14:16:41.95:345,42,0	0/1:3,9:12:2.03:192,0,2	0/1:2,10:13:0.36:195,0,0	1/1:2,11:13:29.96:246,30,0	1/1:3,8:12:19.99:154,20,0	1/1:4,22:26:65.90:541,66,0	1/1:3,29:32:34.50:591,35,0	1/1:2,14:16:15.96:336,16,0
chr10	34019875	.	CTATT	C	1000.71	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=7.097;DP=416;FS=5.973;HRun=0;HaplotypeScore=63.8053;InbreedingCoeff=0.9390;MQ=64.31;MQ0=0;MQRankSum=-1.108;QD=34.51;ReadPosRankSum=1.464;VQSLOD=2.5920;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:48.15:0,48,1168	0/0:4,0:4:12.04:0,12,305	0/0:5,0:5:6.49:0,6,153	0/0:6,0:6:15.05:0,15,381	0/0:23,0:23:63.22:0,63,1581	0/0:20,0:20:57.19:0,57,1390	0/0:14,0:14:33.11:0,33,733	0/0:30,0:30:72.24:0,72,1753	0/0:17,0:17:51.18:0,51,1221	0/0:17,0:17:42.14:0,42,1064	0/0:21,0:21:57.20:0,57,1447	1/1:2,9:11:18.06:311,18,0	0/0:16,0:16:45.15:0,45,1115	0/0:14,0:14:39.11:0,39,873	0/0:14,0:14:39.13:0,39,985	0/0:9,0:9:24.08:0,24,607	0/0:22,0:22:63.20:0,63,1520	0/0:10,0:10:24.08:0,24,609	0/0:12,0:12:27.09:0,27,660	0/0:19,0:19:42.14:0,42,1041	0/0:8,0:8:24.07:0,24,559	0/0:8,0:8:15.01:0,15,325	1/1:1,8:9:24.08:413,24,0	1/1:0,9:9:24.08:417,24,0	0/0:21,0:21:60.21:0,60,1514	0/0:26,0:26:66.22:0,66,1595	0/0:19,0:19:57.20:0,57,1443	0/0:14,0:14:42.14:0,42,1039
chr10	34022669	.	GA	G	105.46	PASS	AB=0.798;AC=2;AF=0.038;AN=52;BaseQRankSum=4.769;DP=289;FS=16.547;HRun=3;HaplotypeScore=84.9015;InbreedingCoeff=-0.0688;MQ=31.57;MQ0=10;MQRankSum=-1.460;QD=5.02;ReadPosRankSum=1.985;VQSLOD=-0.5388;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:15:29.85:0,30,328	0/0:6,0:6:14.97:0,15,158	./.	./.	0/0:13,0:13:30.21:0,30,321	0/0:9,0:9:14.99:0,15,174	0/0:11,0:9:11.94:0,12,140	0/0:27,0:18:47.95:0,48,497	0/0:5,0:5:6.01:0,6,72	0/0:14,0:13:39.13:0,39,537	0/0:11,0:11:20.94:0,21,231	0/1:9,1:8:29.74:65,0,30	0/0:12,0:13:25.95:0,26,185	0/0:6,0:5:6.02:0,6,73	0/0:8,0:7:12.02:0,12,139	0/0:8,0:7:14.91:0,15,164	0/0:13,0:11:15.04:0,15,188	0/0:8,0:8:20.85:0,21,211	0/0:10,0:6:14.55:0,15,120	0/0:22,0:20:35.56:0,36,429	0/0:7,0:5:5.83:0,6,37	0/0:16,0:16:37.34:0,37,417	0/1:6,5:11:99:128,0,176	0/0:7,1:7:9.03:0,9,128	0/0:15,0:13:20.82:0,21,230	0/0:8,0:7:18.05:0,18,238	0/0:10,0:9:21.02:0,21,221	0/0:1,0:1:3.01:0,3,41
chr10	34022695	.	AGAG	A	3710.15	PASS	AB=0.719;AC=41;AF=0.759;AN=54;BaseQRankSum=-1.252;DP=226;FS=1.102;HRun=0;HaplotypeScore=60.5554;InbreedingCoeff=0.1649;MQ=25.40;MQ0=18;MQRankSum=1.391;QD=20.27;ReadPosRankSum=0.901;VQSLOD=3.1323;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,4:6:3.01:39,3,0	0/1:2,2:5:8.79:118,0,9	0/0:14,0:2:6.02:0,6,85	0/0:16,0:5:12.02:0,12,191	1/1:0,3:3:6.02:90,6,0	1/1:4,5:8:8.16:44,8,0	0/0:4,6:8:6.02:0,6,104	1/1:4,5:5:15.05:264,15,0	1/1:2,5:7:2.98:21,3,0	0/1:4,2:5:49.50:77,0,50	1/1:0,6:6:12.04:194,12,0	1/1:5,0:4:8.11:45,8,0	1/1:1,6:7:21.06:347,21,0	0/1:2,5:6:3.11:120,0,3	0/1:1,5:5:15.95:173,0,16	1/1:3,4:6:3.76:178,4,0	1/1:6,3:7:12.64:83,13,0	1/1:1,1:2:3.01:54,3,0	1/1:1,3:3:3.90:57,4,0	1/1:1,20:19:40.91:644,41,0	./.	0/1:1,9:10:3.34:326,0,3	0/1:11,0:11:0.07:106,0,0	0/1:12,0:11:6.02:11,0,6	1/1:4,8:9:15.03:232,15,0	1/1:2,6:6:18.01:286,18,0	1/1:1,3:3:6.02:91,6,0	1/1:0,4:4:6.02:110,6,0
chr10	34022712	.	G	GGA	1457.12	PASS	AB=0.911;AC=33;AF=0.635;AN=52;BaseQRankSum=6.796;DP=244;FS=3.165;HRun=0;HaplotypeScore=88.1443;InbreedingCoeff=-0.1215;MQ=25.77;MQ0=18;MQRankSum=2.293;QD=7.25;ReadPosRankSum=-1.869;VQSLOD=2.9409;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	0/1:3,0:4:22.83:46,0,23	1/1:14,0:2:2.74:12,3,0	0/0:16,0:5:14.83:0,15,143	1/1:15,0:15:6.47:44,6,0	1/1:11,0:10:2.92:17,3,0	0/1:7,0:7:0:0,0,0	0/0:13,0:9:22.15:0,22,162	1/1:7,0:7:5.83:32,6,0	0/1:4,0:5:42.33:42,0,56	1/1:9,0:9:10.66:92,11,0	0/1:6,0:6:43.27:43,0,47	0/1:5,2:8:10.39:83,0,10	1/1:3,1:3:3.01:60,3,0	1/1:4,0:4:8.65:46,9,0	0/1:3,2:4:56.37:97,0,56	0/1:10,0:7:12.19:12,0,39	0/1:3,0:3:4.66:15,0,5	0/0:4,0:3:4.79:0,5,26	0/1:20,0:20:17.38:72,0,17	./.	1/1:11,0:11:14.19:76,14,0	0/1:7,0:12:48.03:221,0,48	0/1:10,0:11:19.04:46,0,19	1/1:4,2:4:6.02:112,6,0	0/1:8,4:10:5.57:288,0,6	1/1:5,0:4:10.40:73,10,0	0/1:5,1:6:21.07:78,0,21
chr10	34022918	.	GAGACAGAC	G	7944.17	PASS	AC=44;AF=0.815;AN=54;BaseQRankSum=-2.680;DP=559;FS=5.206;HRun=0;HaplotypeScore=146.5677;InbreedingCoeff=0.7868;MQ=54.38;MQ0=3;MQRankSum=-8.032;QD=20.32;ReadPosRankSum=-0.253;VQSLOD=4.0779;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:69.23:0,69,2491	1/1:4,2:6:3.48:76,3,0	0/0:28,0:22:8.96:0,9,118	./.	1/1:9,8:18:21.96:508,22,0	1/1:8,6:14:9.03:225,9,0	1/1:12,8:20:9.03:225,9,0	1/1:40,0:40:6.01:99,6,0	1/1:7,16:23:24.08:601,24,0	1/1:9,7:16:18.05:385,18,0	1/1:7,9:16:15.05:375,15,0	0/0:12,0:22:18.06:0,18,567	1/1:5,8:13:21.07:518,21,0	1/1:5,8:13:15.05:372,15,0	1/1:6,12:19:27.09:656,27,0	1/1:8,8:16:21.07:518,21,0	1/1:16,7:22:12.04:300,12,0	1/1:19,1:19:9.03:198,9,0	1/1:10,8:18:20.99:525,21,0	1/1:6,12:18:33:713,33,0	1/1:23,11:32:6.02:150,6,0	1/1:11,9:20:15.05:375,15,0	0/0:11,0:18:21.07:0,21,685	0/0:15,0:32:51.15:0,51,1718	1/1:8,6:14:15.05:375,15,0	1/1:8,7:15:21.07:524,21,0	1/1:5,4:9:6.02:150,6,0	1/1:1,5:6:3.01:75,3,0
chr10	34023227	.	GAAGAA	G	2640.15	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=8.908;DP=584;FS=0.000;HRun=0;HaplotypeScore=109.2882;InbreedingCoeff=0.9907;MQ=73.18;MQ0=0;MQRankSum=-2.041;QD=52.80;ReadPosRankSum=3.192;VQSLOD=4.1095;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,48:50:99:2735,132,0	0/0:7,0:7:21.07:0,21,646	0/0:15,0:15:39.12:0,39,949	0/0:17,0:17:35.33:0,35,935	0/0:18,0:18:48.15:0,48,1407	0/0:26,0:26:72.25:0,72,2152	0/0:18,0:18:54.19:0,54,1583	0/0:28,0:28:72.25:0,72,2072	0/0:16,0:16:48.16:0,48,1476	0/0:22,0:22:63.22:0,63,1915	0/0:24,0:24:66.23:0,66,1970	0/0:22,0:22:63.22:0,63,1899	0/0:18,0:18:51.18:0,51,1552	0/0:17,0:17:51.18:0,51,1530	0/0:19,0:19:57.20:0,57,1714	0/0:9,0:9:27.09:0,27,830	0/0:20,0:20:51.18:0,51,1563	0/0:14,0:14:42.14:0,42,1183	0/0:28,0:28:75.26:0,75,2231	0/0:26,0:26:69.24:0,69,1983	0/0:32,0:32:87.30:0,87,2599	0/0:13,0:13:39.13:0,39,1147	0/0:16,0:16:42.14:0,42,1285	0/0:29,0:29:84.29:0,84,2508	0/0:22,0:22:66.23:0,66,1948	0/0:19,0:19:54.19:0,54,1621	0/0:31,0:31:90.31:0,90,2682	0/0:8,0:8:21.07:0,21,646
chr10	34026815	.	C	CTT	593.79	PASS	AB=0.925;AC=9;AF=0.161;AN=56;BaseQRankSum=1.649;DP=512;FS=1.311;HRun=14;HaplotypeScore=73.5908;InbreedingCoeff=0.5410;MQ=62.12;MQ0=7;MQRankSum=-1.330;QD=5.71;ReadPosRankSum=-1.324;VQSLOD=-0.2807;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:28:39.06:0,39,202	0/0:6,0:6:11.66:0,12,87	0/0:28,0:16:6.41:0,6,44	0/0:29,0:16:15.74:0,16,120	0/0:25,0:28:43.60:0,44,442	0/0:14,0:15:25.42:0,25,173	0/0:16,0:16:2.24:0,2,135	0/0:34,0:34:20.44:0,20,249	0/0:11,0:11:17.88:0,18,150	0/0:19,0:18:10.66:0,11,219	0/0:17,0:18:24.89:0,25,278	1/1:3,11:15:15.51:186,16,0	0/0:8,0:10:0.95:0,1,36	0/0:16,0:16:31.88:0,32,244	0/0:8,0:10:12.19:0,12,109	0/0:11,0:13:26.62:0,27,247	0/0:29,0:31:71.26:0,71,604	0/0:18,0:16:19.83:0,20,217	0/0:22,0:24:50.28:0,50,382	0/1:8,0:8:0.17:0,0,33	0/0:14,0:14:4.60:0,5,144	0/0:12,0:12:24.38:0,24,194	1/1:8,10:20:26.85:282,27,0	1/1:5,14:19:23.30:256,23,0	0/1:17,1:20:10.18:10,0,242	0/1:15,0:18:0.27:0,0,148	0/0:15,0:17:20.39:0,20,169	0/0:7,0:8:8.38:0,8,99
chr10	34028526	.	CAT	C	3690.99	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=1.516;DP=515;FS=3.197;HRun=0;HaplotypeScore=80.6162;InbreedingCoeff=0.7089;MQ=56.47;MQ0=15;MQRankSum=-1.447;QD=8.47;ReadPosRankSum=-0.963;VQSLOD=3.2206;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:26.91:0,27,212	1/1:13,0:12:11.73:109,12,0	1/1:5,0:1:2.04:6,2,0	0/0:3,0:2:2.96:0,3,19	1/1:18,0:15:15.64:110,16,0	1/1:27,0:27:2.92:18,3,0	1/1:9,0:9:2.94:18,3,0	1/1:24,0:18:40.34:328,40,0	1/1:20,0:20:14.37:102,14,0	1/1:17,2:18:16.41:337,16,0	1/1:19,0:18:17.71:162,18,0	0/0:16,0:16:29.99:0,30,286	1/1:3,12:16:12.04:155,12,0	1/1:0,12:12:5.89:81,6,0	1/1:1,22:22:11.83:162,12,0	1/1:3,19:22:12.04:162,12,0	1/1:27,0:27:11.88:96,12,0	1/1:10,3:13:27.78:266,28,0	1/1:17,0:11:29.81:260,30,0	1/1:5,19:23:6:80,6,0	1/1:4,27:30:6.02:81,6,0	1/1:4,15:18:6.01:68,6,0	0/0:14,0:13:11.66:0,12,97	0/0:26,0:25:51.02:0,51,519	1/1:9,0:7:11.68:101,12,0	1/1:3,31:33:76.48:623,76,0	1/1:3,17:20:8.88:107,9,0	1/1:14,1:13:32.77:262,33,0
chr10	34028531	.	ATATGTG	A	1975.27	PASS	AB=0.906;AC=24;AF=0.429;AN=56;BaseQRankSum=-4.953;DP=514;FS=2.442;HRun=0;HaplotypeScore=103.3826;InbreedingCoeff=-0.0010;MQ=56.65;MQ0=20;MQRankSum=-2.190;QD=5.93;ReadPosRankSum=2.446;VQSLOD=1.4251;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:26.92:0,27,212	0/1:5,0:13:12.80:13,0,101	1/1:4,0:1:2.04:6,2,0	0/0:2,0:2:2.96:0,3,19	0/1:13,4:14:31.13:90,0,31	1/1:0,26:27:2.39:17,2,0	1/1:1,7:7:3.01:56,3,0	1/1:23,0:16:23.24:308,23,0	1/1:2,18:21:14.71:241,15,0	0/1:19,0:18:99:217,0,183	0/1:17,0:17:78.03:78,0,97	0/0:16,0:16:30.01:0,30,438	0/0:14,0:14:12.03:0,12,127	0/0:14,0:14:11.98:0,12,143	0/0:27,0:26:20.78:0,21,273	0/0:22,0:22:15.03:0,15,185	1/1:3,25:28:11.91:231,12,0	0/1:12,0:12:54.38:54,0,203	0/1:6,0:11:99:136,0,99	0/0:21,0:20:6.01:0,6,61	0/1:29,0:29:7.75:8,0,49	0/1:16,0:17:9.22:9,0,24	0/0:13,0:13:11.79:0,12,97	0/0:31,0:30:53.87:0,54,954	0/1:9,0:6:37.75:38,0,78	0/1:36,0:34:99:418,0,255	0/1:19,0:20:42:42,0,112	0/1:15,0:14:52.73:187,0,53
chr10	34028533	.	A	ATG	160.50	PASS	AB=1.000;AC=10;AF=0.200;AN=50;BaseQRankSum=-2.803;DP=516;FS=4.815;HRun=0;HaplotypeScore=95.0030;InbreedingCoeff=0.4116;MQ=56.31;MQ0=24;MQRankSum=0.732;QD=1.01;ReadPosRankSum=-0.550;VQSLOD=1.6326;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:14,0:20:0:0,0,0	0/0:14,0:13:9.33:0,9,54	./.	./.	1/1:18,0:14:2.83:14,3,0	0/1:27,0:27:0:0,0,0	0/0:8,0:7:0:0,0,0	0/1:24,0:17:0:0,0,0	0/0:21,0:21:5.57:0,6,28	0/1:21,0:17:30.94:31,0,50	0/0:16,0:16:8.22:0,8,48	1/1:11,0:16:3:26,3,0	0/0:16,0:15:11.53:0,12,72	0/0:15,0:15:11.87:0,12,81	0/0:27,0:26:23.62:0,24,165	0/0:21,0:20:14.81:0,15,99	0/0:26,0:26:8.18:0,8,37	0/0:13,0:13:20.74:0,21,138	0/0:14,0:10:11.77:0,12,78	0/0:21,0:20:5.72:0,6,37	0/0:30,0:29:8.88:0,9,58	0/0:16,0:16:5.77:0,6,33	./.	1/1:12,16:32:0.49:196,0,0	0/0:9,0:6:5.95:0,6,43	0/0:36,0:34:19.52:0,20,146	0/0:19,0:19:11.61:0,12,75	0/0:17,0:14:8.54:0,9,53
chr10	34029267	.	C	CAGAA	2922.90	PASS	AB=1.000;AC=43;AF=0.896;AN=48;BaseQRankSum=-4.009;DP=403;FS=4.310;HRun=0;HaplotypeScore=91.0234;InbreedingCoeff=-0.0858;MQ=65.21;MQ0=7;MQRankSum=-1.047;QD=8.10;ReadPosRankSum=-0.927;VQSLOD=1.9595;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:26:32.80:273,33,0	1/1:5,0:5:2.49:9,2,0	./.	./.	0/1:21,0:21:29.30:53,0,29	0/1:18,0:17:34.54:117,0,35	1/1:15,0:15:12.79:92,13,0	1/1:33,0:31:39.49:241,39,0	1/1:12,0:12:20.96:215,21,0	1/1:14,0:12:3.55:42,4,0	1/1:6,0:6:11.80:84,12,0	1/1:12,0:12:8.92:66,9,0	1/1:7,0:7:2.80:13,3,0	1/1:15,0:15:11.95:111,12,0	0/1:22,0:22:50.87:87,0,51	./.	0/1:12,0:12:37.85:73,0,38	1/1:17,0:17:13.78:181,14,0	1/1:12,0:11:6.01:68,6,0	1/1:13,0:13:14.56:115,15,0	./.	1/1:9,0:9:3.47:27,3,0	1/1:3,5:8:6.02:140,6,0	1/1:21,0:21:47.87:577,48,0	1/1:18,0:18:24.05:166,24,0	1/1:11,0:11:0.24:1,0,0	1/1:23,0:22:23.17:214,23,0	0/1:11,0:10:48.31:78,0,48
chr10	34029393	.	CGTGT	C	39.49	PASS	AB=0.973;AC=11;AF=0.262;AN=42;BaseQRankSum=1.400;DP=461;FS=0.000;HRun=0;HaplotypeScore=87.6749;InbreedingCoeff=-0.0161;MQ=57.78;MQ0=20;MQRankSum=0.304;QD=0.26;ReadPosRankSum=-0.402;VQSLOD=1.1738;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:22,2:22:3.01:42,3,0	./.	./.	./.	0/0:14,0:14:5.27:0,5,30	0/0:10,0:9:5.98:0,6,55	0/0:25,0:24:17.04:0,17,165	./.	0/1:21,0:20:26.88:27,0,37	0/0:20,0:18:2.97:0,3,20	./.	0/0:8,0:8:2.50:0,3,37	0/1:14,0:14:12.65:13,0,39	1/1:12,0:11:0.47:1,0,0	0/0:13,0:13:6:0,6,74	0/0:8,0:8:8.99:0,9,104	0/0:25,0:25:14.34:0,14,132	0/1:25,0:23:13.50:14,0,157	0/0:9,0:8:3:0,3,27	./.	0/0:37,0:37:6.35:0,6,66	0/0:15,0:16:6:0,6,57	./.	0/1:18,2:19:35.06:35,0,46	1/1:13,0:14:1.35:3,1,0	0/0:18,0:18:5.98:0,6,57	0/0:15,0:15:7.47:0,7,37	0/1:20,0:19:17.86:18,0,55
chr10	34029443	.	TGCGCGC	T	2255.17	PASS	AB=0.692;AC=33;AF=0.660;AN=50;BaseQRankSum=3.853;DP=319;FS=9.992;HRun=0;HaplotypeScore=94.6178;InbreedingCoeff=0.5059;MQ=44.29;MQ0=19;MQRankSum=-4.511;QD=11.00;ReadPosRankSum=2.554;VQSLOD=1.5393;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:30:0.89:0,1,2	./.	./.	0/0:8,0:3:5.91:0,6,52	0/0:9,5:15:2.51:0,3,23	1/1:3,5:6:1.25:3,1,0	1/1:9,6:14:3.92:122,4,0	1/1:4,6:16:32.66:462,33,0	1/1:8,3:10:1.02:44,1,0	1/1:7,5:10:19.79:292,20,0	0/1:5,6:10:0:0,0,0	0/0:11,0:9:6.38:0,6,91	1/1:2,4:6:10.79:127,11,0	1/1:4,1:4:0.47:1,0,0	1/1:7,1:7:3:25,3,0	0/0:5,2:7:1.72:0,2,4	1/1:8,2:17:14.73:191,15,0	1/1:17,2:18:17.39:462,17,0	1/1:3,1:3:9:107,9,0	0/1:4,8:10:0:0,0,0	0/1:23,6:27:5.98:28,0,6	1/1:6,4:10:2.68:11,3,0	0/0:9,0:7:9.02:0,9,161	0/0:17,0:15:24.49:0,24,404	./.	1/1:6,6:12:25.38:377,25,0	1/1:3,2:5:6.02:117,6,0	1/1:3,0:2:5.60:28,6,0
chr10	34029444	.	G	GCA	768.41	PASS	AB=0.893;AC=26;AF=0.542;AN=48;BaseQRankSum=0.359;DP=321;FS=8.469;HRun=0;HaplotypeScore=93.4896;InbreedingCoeff=0.2912;MQ=44.39;MQ0=19;MQRankSum=-2.740;QD=3.92;ReadPosRankSum=-0.723;VQSLOD=1.5826;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	0/0:9,0:3:3.01:0,3,36	0/0:8,6:15:2.92:0,3,17	0/0:7,1:6:1.25:0,1,3	1/1:14,1:14:4.12:36,4,0	1/1:17,0:16:6.50:196,6,0	0/1:6,4:10:16.01:33,0,16	0/1:12,0:10:2.82:63,0,3	0/1:11,0:10:0:0,0,0	0/0:11,0:9:11.80:0,12,106	0/1:6,0:6:5.32:25,0,5	0/1:2,3:4:0:0,0,0	1/1:6,2:7:3:25,3,0	0/0:5,2:7:1.72:0,2,4	0/1:16,2:17:6.37:32,0,6	1/1:17,1:17:15.02:178,15,0	1/1:4,0:3:8.04:65,8,0	0/1:12,0:10:0:0,0,0	0/1:27,2:27:6.41:49,0,6	1/1:10,0:10:2.68:11,3,0	0/0:9,0:7:9.03:0,9,116	0/0:17,0:15:24.49:0,24,279	./.	1/1:10,2:12:14.22:127,14,0	1/1:5,0:5:4.26:12,4,0	1/1:3,0:2:5.93:53,6,0
chr10	34029448	.	GCGCA	G	1164.41	PASS	AB=1.000;AC=31;AF=0.705;AN=44;BaseQRankSum=3.184;DP=303;FS=0.000;HRun=0;HaplotypeScore=90.8049;InbreedingCoeff=0.1968;MQ=48.16;MQ0=13;MQRankSum=-3.342;QD=5.49;ReadPosRankSum=2.383;VQSLOD=1.5093;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	./.	1/1:4,0:3:2.37:8,2,0	0/0:10,0:4:6.01:0,6,69	0/0:13,0:13:2.07:0,2,9	1/1:7,0:6:2.92:17,3,0	0/1:14,0:13:12.30:57,0,12	1/1:14,0:14:21.12:198,21,0	1/1:10,0:10:7.55:69,8,0	1/1:12,0:11:15.49:148,15,0	0/1:12,0:11:0:0,0,0	1/1:11,0:9:4.59:39,5,0	1/1:6,0:6:11.96:104,12,0	./.	./.	0/1:6,0:6:0:0,0,0	1/1:17,0:16:9.49:89,9,0	0/1:16,0:16:4.83:204,0,5	1/1:3,0:3:5.68:39,6,0	0/1:11,0:10:0:0,0,0	1/1:27,0:25:3.34:19,3,0	./.	0/1:12,0:10:26.16:26,0,34	0/1:16,0:14:20.83:21,0,58	./.	1/1:10,0:10:21.09:187,21,0	1/1:4,0:4:6.01:59,6,0	0/0:3,0:2:2.60:0,3,10
chr10	34029452	.	ACGCGCG	A	2543.90	PASS	AB=0.578;AC=35;AF=0.761;AN=46;BaseQRankSum=3.787;DP=316;FS=9.981;HRun=0;HaplotypeScore=91.1418;InbreedingCoeff=0.4935;MQ=52.08;MQ0=12;MQRankSum=-4.779;QD=11.89;ReadPosRankSum=0.750;VQSLOD=1.5909;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	./.	1/1:4,0:3:2.50:9,2,0	0/0:13,0:6:1.61:0,2,52	1/1:5,7:12:2.91:46,3,0	./.	1/1:4,16:19:6.02:132,6,0	1/1:7,6:13:26.56:463,27,0	1/1:4,4:8:5.75:50,6,0	1/1:3,10:12:22.60:370,23,0	0/1:4,8:11:0:0,0,0	0/0:10,0:8:11.91:0,12,118	1/1:2,4:6:5.90:134,6,0	1/1:2,1:3:3.01:46,3,0	1/1:6,1:6:2.99:24,3,0	./.	1/1:14,2:15:1.07:159,1,0	1/1:3,14:17:24.55:485,25,0	1/1:1,3:4:8.53:112,9,0	0/1:3,12:14:0:0,0,0	0/1:10,27:35:0.16:1,0,0	./.	0/0:11,0:10:18.04:0,18,277	0/0:12,0:10:18.06:0,18,364	1/1:3,6:9:3.01:48,3,0	1/1:2,8:10:25.45:428,25,0	1/1:2,2:4:6.02:122,6,0	1/1:4,0:3:3.01:46,3,0
chr10	34029618	.	T	TG	1618.98	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-7.505;DP=647;FS=5.678;HRun=4;HaplotypeScore=66.1645;InbreedingCoeff=0.9993;MQ=94.98;MQ0=0;MQRankSum=-1.120;QD=30.55;ReadPosRankSum=1.113;VQSLOD=4.1149;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,108,1203	0/0:11,0:11:33.09:0,33,374	0/0:34,0:34:81.21:0,81,897	0/0:28,0:28:66.16:0,66,738	0/0:25,0:25:69.20:0,69,782	0/0:12,0:12:36.09:0,36,399	0/0:38,0:38:99:0,111,1249	0/0:38,0:38:99:0,105,1191	0/0:24,0:24:69.20:0,69,782	0/0:22,0:22:60.17:0,60,680	0/0:18,0:18:39.11:0,39,442	1/1:1,10:11:27.09:369,27,0	0/0:22,0:22:60.16:0,60,670	0/0:19,0:19:51.14:0,51,578	0/0:25,0:25:75.21:0,75,851	0/0:15,0:15:42.12:0,42,476	0/0:25,0:25:66.19:0,66,749	0/0:22,0:22:66.13:0,66,722	0/0:15,0:15:36.10:0,36,408	0/0:12,0:12:36.10:0,36,408	0/0:44,0:44:99:0,126,1429	0/0:16,0:16:42.12:0,42,476	1/1:1,15:17:42.14:572,42,0	1/1:4,21:25:60.20:820,60,0	0/0:17,0:17:45.13:0,45,510	0/0:18,0:18:48.14:0,48,545	0/0:27,0:27:78.22:0,78,884	0/0:24,0:24:69.18:0,69,771
chr10	34030918	.	TAGGAAGGA	T	2300.33	PASS	AB=0.982;AC=32;AF=0.615;AN=52;BaseQRankSum=-0.888;DP=394;FS=4.903;HRun=0;HaplotypeScore=115.5959;InbreedingCoeff=0.3859;MQ=69.40;MQ0=4;MQRankSum=-2.063;QD=8.81;ReadPosRankSum=-2.768;VQSLOD=1.5702;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:26:24.21:115,0,24	1/1:4,0:4:8.94:96,9,0	./.	./.	0/0:17,0:17:17.39:0,17,106	0/1:17,0:16:24.15:24,0,103	0/0:20,0:20:8.98:0,9,73	1/1:16,0:16:2.98:21,3,0	0/1:14,0:14:8.57:9,0,43	1/1:14,0:12:4.50:202,4,0	1/1:8,3:11:2.91:37,3,0	0/0:13,0:13:15.33:0,15,136	1/1:5,0:6:2.94:18,3,0	1/1:22,0:22:21.02:244,21,0	1/1:18,0:18:15.01:160,15,0	1/1:13,0:13:20.97:282,21,0	0/0:18,0:17:2.57:0,3,19	0/0:12,0:12:7.29:0,7,45	1/1:7,0:6:3.01:42,3,0	1/1:5,4:9:5.98:59,6,0	1/1:18,0:18:18.01:235,18,0	0/1:17,0:17:18.05:153,0,18	0/0:10,0:10:2.99:0,3,24	0/0:15,0:14:3.01:0,3,106	1/1:8,9:17:6.02:89,6,0	1/1:15,1:16:29.99:426,30,0	1/1:16,0:16:21.03:258,21,0	0/0:3,0:3:4.23:0,4,26
chr10	34030968	.	GGAAA	G	2862.86	PASS	AB=1.000;AC=46;AF=0.821;AN=56;BaseQRankSum=2.603;DP=360;FS=5.438;HRun=0;HaplotypeScore=127.1632;InbreedingCoeff=0.1643;MQ=37.37;MQ0=11;MQRankSum=-3.587;QD=8.60;ReadPosRankSum=-1.779;VQSLOD=2.3455;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:28:99:104,0,256	1/1:4,0:4:10.09:58,10,0	1/1:5,0:1:2.04:6,2,0	0/0:9,0:2:6.01:0,6,57	1/1:14,0:14:7.49:112,7,0	1/1:17,0:16:17.64:177,18,0	1/1:12,0:12:15.52:104,16,0	0/1:15,0:13:29.93:123,0,30	1/1:12,0:12:10.35:112,10,0	1/1:19,0:16:25.33:314,25,0	1/1:7,0:7:6.20:51,6,0	0/1:16,0:16:71.67:107,0,72	1/1:7,0:6:8.01:38,8,0	1/1:13,0:13:17.02:140,17,0	1/1:10,0:9:11.57:74,12,0	1/1:10,0:10:26.73:194,27,0	1/1:12,0:11:6.03:107,6,0	1/1:10,0:10:3.94:80,4,0	0/1:7,0:7:0.88:81,0,1	0/1:9,0:8:4.14:46,0,4	1/1:17,0:15:9.64:147,10,0	1/1:17,0:17:21.69:214,22,0	0/0:12,5:16:17.29:0,17,97	0/1:11,0:9:16.08:16,0,90	1/1:14,0:14:5.14:65,5,0	1/1:24,0:24:7.47:266,7,0	1/1:17,0:15:14.99:204,15,0	1/1:6,0:5:11.63:68,12,0
chr10	34030972	.	AGAAG	A	1826.59	PASS	AB=0.974;AC=34;AF=0.607;AN=56;BaseQRankSum=-3.658;DP=352;FS=15.511;HRun=0;HaplotypeScore=132.5063;InbreedingCoeff=-0.1471;MQ=35.60;MQ0=8;MQRankSum=-0.968;QD=5.80;ReadPosRankSum=3.963;VQSLOD=1.7135;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:28:62.77:143,0,63	0/1:7,0:7:11.93:15,0,12	0/0:6,0:1:2.99:0,3,24	0/0:11,0:2:6.02:0,6,119	1/1:13,0:13:4.65:33,5,0	0/1:15,0:15:10.23:55,0,10	1/1:10,0:10:8.61:116,9,0	0/1:7,9:15:8.12:311,0,8	0/0:13,0:13:2.31:0,2,29	1/1:20,0:17:0.28:114,0,0	0/1:7,0:7:6.64:15,0,7	1/1:16,0:16:0.30:154,0,0	0/1:4,0:7:2.63:19,0,3	0/1:11,0:11:19:39,0,19	0/0:7,0:6:2.39:0,2,5	1/1:9,0:9:4.37:50,4,0	1/1:11,0:10:10.99:152,11,0	1/1:9,0:9:3.48:37,3,0	1/1:3,4:7:11.50:113,12,0	0/1:7,0:6:0:0,0,0	1/1:16,0:14:11.97:85,12,0	1/1:17,0:17:20.28:151,20,0	0/1:17,0:17:12.60:13,0,24	0/1:10,0:9:28.25:28,0,31	0/1:14,0:14:13.98:29,0,14	0/1:23,0:23:8.82:238,0,9	0/1:18,0:16:31.08:31,0,46	0/1:6,0:5:0.64:32,0,1
chr10	34030984	.	G	GGAAA	5304.72	PASS	AB=0.997;AC=43;AF=0.768;AN=56;BaseQRankSum=1.120;DP=352;FS=0.536;HRun=0;HaplotypeScore=133.9813;InbreedingCoeff=0.0809;MQ=39.60;MQ0=8;MQRankSum=-3.339;QD=16.22;ReadPosRankSum=-1.315;VQSLOD=3.9638;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:31:11.25:11,0,161	0/1:7,0:7:4.91:131,0,5	0/1:9,0:4:6.94:7,0,41	0/1:16,0:6:15.65:16,0,103	1/1:12,0:12:26.21:287,26,0	1/1:16,0:18:22.52:478,23,0	1/1:11,0:11:12.77:182,13,0	0/1:16,0:15:45.84:96,0,46	0/1:12,0:14:5.56:335,0,6	1/1:20,0:17:24.40:642,24,0	1/1:7,0:7:16.24:167,16,0	0/1:16,0:16:17.70:18,0,105	1/1:8,0:7:8.88:103,9,0	1/1:13,0:13:12.95:343,13,0	1/1:6,0:5:9.46:129,9,0	0/1:7,0:7:26.33:157,0,26	0/1:11,0:10:17.41:124,0,17	1/1:3,0:3:6.02:97,6,0	1/1:8,0:7:16.69:212,17,0	1/1:6,0:5:6.02:112,6,0	1/1:13,0:12:5.98:126,6,0	1/1:13,0:13:9.11:172,9,0	0/0:16,0:16:16.52:0,17,86	0/0:9,0:8:13.67:0,14,69	1/1:12,0:12:16.53:184,17,0	1/1:13,11:25:38.87:635,39,0	1/1:18,0:16:4.52:391,5,0	1/1:7,0:7:11.93:150,12,0
chr10	34033971	.	C	CAA	7319.42	PASS	AB=0.693;AC=40;AF=0.714;AN=56;BaseQRankSum=-0.855;DP=481;FS=6.429;HRun=11;HaplotypeScore=68.9575;InbreedingCoeff=0.6181;MQ=57.03;MQ0=10;MQRankSum=-2.914;QD=18.72;ReadPosRankSum=-2.607;VQSLOD=3.2463;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:26:25.58:0,26,384	1/1:2,9:11:15.01:193,15,0	0/0:11,0:4:3.95:0,4,52	0/0:10,0:7:6.54:0,7,43	1/1:4,19:26:48.07:628,48,0	1/1:4,12:21:38.10:495,38,0	1/1:7,9:12:27.09:383,27,0	1/1:7,8:17:29.50:318,29,0	1/1:5,8:16:20.04:234,20,0	1/1:13,8:21:21:385,21,0	1/1:7,15:23:36.81:436,37,0	0/0:10,0:11:23.71:0,24,215	1/1:8,5:16:17.53:200,18,0	0/1:4,5:9:8.04:223,0,8	1/1:5,10:16:24.52:282,25,0	1/1:8,11:20:23.57:308,24,0	1/1:4,16:22:18.54:588,19,0	1/1:2,11:15:30.09:402,30,0	0/1:9,5:10:6.05:205,0,6	1/1:7,6:15:14.97:171,15,0	0/1:8,6:14:11.56:165,0,12	0/1:4,1:6:23.08:37,0,23	0/0:14,0:14:30.02:0,30,291	0/0:15,0:16:32.97:0,33,368	1/1:5,16:23:44.38:563,44,0	1/1:10,11:21:12.95:464,13,0	1/1:5,14:25:33.74:342,34,0	1/1:3,9:15:26.03:298,26,0
chr10	34034256	.	C	CT	4257.96	PASS	AB=0.615;AC=42;AF=0.750;AN=56;BaseQRankSum=-4.568;DP=565;FS=0.558;HRun=15;HaplotypeScore=73.2048;InbreedingCoeff=-0.0219;MQ=80.52;MQ0=1;MQRankSum=-1.513;QD=8.65;ReadPosRankSum=-0.213;VQSLOD=3.9903;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:17,25:42:56:161,0,56	0/1:2,5:8:3.85:106,0,4	0/0:44,0:29:18.01:0,18,122	0/0:28,0:21:9.19:0,9,44	1/1:6,16:24:56.99:440,57,0	0/1:4,7:12:6.73:84,0,7	0/1:11,0:24:7.28:43,0,7	1/1:18,5:25:30.08:222,30,0	0/1:8,8:16:6.02:64,0,6	1/1:7,11:18:1:200,1,0	1/1:2,10:12:2.93:127,3,0	1/1:3,9:13:17.73:126,18,0	0/1:7,13:20:18.04:83,0,18	1/1:4,8:12:11.99:100,12,0	1/1:9,4:13:4.34:117,4,0	1/1:12,2:16:6.28:162,6,0	1/1:9,15:24:7.70:138,8,0	1/1:7,17:26:40.92:312,41,0	1/1:12,7:21:3.96:166,4,0	0/1:3,7:10:0.03:108,0,0	1/1:5,4:9:11.99:101,12,0	0/1:3,6:9:3.07:79,0,3	1/1:11,4:16:8.74:162,9,0	0/1:4,11:15:12.14:117,0,12	1/1:8,8:16:1.93:150,2,0	1/1:13,31:44:35.78:486,36,0	1/1:20,7:30:0.17:270,0,0	0/1:5,10:16:24.10:136,0,24
chr10	34034629	.	GGAA	G	1153.96	PASS	AB=0.969;AC=33;AF=0.688;AN=48;BaseQRankSum=-3.598;DP=237;FS=0.000;HRun=0;HaplotypeScore=44.9511;InbreedingCoeff=0.3980;MQ=87.99;MQ0=3;MQRankSum=-0.456;QD=7.96;ReadPosRankSum=-1.803;VQSLOD=1.8880;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:6:3.52:0,4,48	./.	0/0:43,0:19:27.50:0,27,379	0/0:27,0:12:10.24:0,10,142	1/1:5,0:5:4.35:26,4,0	./.	1/1:17,0:17:12.97:107,13,0	0/1:9,2:11:1.14:1,0,3	1/1:5,0:5:8.07:90,8,0	1/1:4,0:4:3.29:18,3,0	0/1:2,0:2:0:0,0,0	0/1:10,0:10:30.67:49,0,31	1/1:5,1:6:2.98:21,3,0	1/1:5,0:5:9.91:116,10,0	1/1:6,0:6:15.28:113,15,0	1/1:8,0:8:22.21:222,22,0	1/1:15,0:15:12.56:195,13,0	1/1:13,0:13:11.43:168,11,0	1/1:3,0:3:6:58,6,0	./.	1/1:9,0:9:7.08:52,7,0	1/1:3,0:3:3.95:43,4,0	0/1:5,0:5:7.05:7,0,34	0/1:14,0:14:1.98:2,0,107	1/1:3,1:4:2.69:8,3,0	0/0:2,0:2:3.38:0,3,11	0/0:4,0:4:2.10:0,2,7	./.
chr10	34034630	.	GAA	G	1345.55	PASS	AB=0.970;AC=31;AF=0.646;AN=48;BaseQRankSum=-4.101;DP=228;FS=4.279;HRun=2;HaplotypeScore=39.2773;InbreedingCoeff=0.4917;MQ=86.01;MQ0=3;MQRankSum=-1.927;QD=11.03;ReadPosRankSum=-1.523;VQSLOD=0.2052;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:6:3.19:0,3,45	./.	0/0:40,0:17:31.03:0,31,418	0/0:28,0:12:10.52:0,11,134	1/1:5,1:6:4.35:27,4,0	./.	1/1:13,3:16:18.71:116,19,0	0/1:9,1:10:1.11:1,0,3	1/1:5,0:5:9.01:86,9,0	1/1:3,1:4:3.29:18,3,0	0/1:1,0:1:0:0,0,0	0/1:10,0:10:27.91:55,0,28	1/1:1,5:6:2.98:21,3,0	1/1:5,0:5:9.91:116,10,0	1/1:6,0:6:15.45:144,15,0	1/1:8,0:8:23.90:252,24,0	1/1:11,3:14:23.31:219,23,0	1/1:12,0:12:26.52:277,27,0	1/1:3,0:3:6:58,6,0	./.	1/1:8,1:9:7.08:52,7,0	1/1:3,0:3:3.95:43,4,0	0/0:5,0:5:0.01:0,0,41	0/0:14,0:14:6.88:0,7,112	1/1:3,1:4:2.69:8,3,0	0/0:1,1:2:2.97:0,3,10	0/0:2,1:3:2.22:0,2,7	./.
chr10	34035245	.	T	TG	9591.73	PASS	AB=0.597;AC=46;AF=0.821;AN=56;BaseQRankSum=-8.223;DP=466;FS=4.394;HRun=8;HaplotypeScore=55.2796;InbreedingCoeff=0.5747;MQ=82.88;MQ0=0;MQRankSum=-4.953;QD=23.62;ReadPosRankSum=3.270;VQSLOD=5.6165;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:57.01:0,57,521	1/1:2,3:5:9.03:104,9,0	0/0:16,0:14:32.73:0,33,285	0/0:19,0:19:20.05:0,20,272	1/1:3,8:11:21.06:242,21,0	1/1:3,12:15:33.10:381,33,0	1/1:3,22:25:54.16:623,54,0	0/1:9,8:17:2.94:209,0,3	1/1:0,14:14:27.08:312,27,0	1/1:3,18:22:57:635,57,0	1/1:1,7:8:12.04:139,12,0	1/1:1,9:10:24.07:277,24,0	1/1:1,16:17:42.12:485,42,0	1/1:3,9:12:2.34:283,2,0	1/1:3,14:17:39.12:450,39,0	0/1:2,11:13:0.39:250,0,0	1/1:2,25:27:57.17:658,57,0	1/1:3,15:17:33.10:381,33,0	0/1:7,15:22:0.82:473,0,1	1/1:1,8:9:18.05:200,18,0	1/1:5,25:30:69.20:796,69,0	1/1:2,8:10:15.04:173,15,0	1/1:5,10:15:36.09:405,36,0	1/1:6,25:31:34.87:569,35,0	1/1:1,10:11:5.74:319,6,0	0/1:5,15:20:3.82:446,0,4	1/1:1,20:22:54.16:620,54,0	1/1:1,4:5:15.03:163,15,0
chr10	34035809	.	AGGT	A	378.43	PASS	AB=0.975;AC=11;AF=0.220;AN=50;BaseQRankSum=1.012;DP=276;FS=0.795;HRun=0;HaplotypeScore=52.8109;InbreedingCoeff=0.1369;MQ=89.10;MQ0=4;MQRankSum=-1.077;QD=2.54;ReadPosRankSum=2.518;VQSLOD=0.6640;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:14.94:0,15,117	./.	0/1:37,1:24:19.75:20,0,319	0/1:26,0:20:9.89:10,0,162	1/1:2,0:2:3:26,3,0	0/0:2,1:3:0:0,0,0	0/1:8,0:8:1.32:67,0,1	0/0:5,0:5:6.89:0,7,75	./.	0/0:7,0:7:8.97:0,9,77	0/0:1,0:2:0:0,0,0	0/1:15,1:16:49.80:50,0,57	0/0:12,0:12:17.03:0,17,115	0/0:7,0:7:5.60:0,6,55	0/0:9,0:9:11.65:0,12,84	0/1:4,0:6:8.59:9,0,53	0/1:19,0:19:4.54:124,0,5	0/0:16,0:16:26.74:0,27,205	0/0:3,0:3:5.93:0,6,45	0/0:4,0:4:3:0,3,25	0/0:11,0:11:17.80:0,18,125	0/0:3,0:3:3.01:0,3,49	1/1:3,0:3:5.61:48,6,0	0/1:27,2:30:8.62:158,0,9	0/0:4,0:4:5.87:0,6,48	0/0:12,0:12:14.70:0,15,130	0/0:6,0:7:11.29:0,11,113	./.
chr10	34036724	.	TA	T	8964.18	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-3.018;DP=493;FS=10.911;HRun=11;HaplotypeScore=51.8607;InbreedingCoeff=0.8985;MQ=64.69;MQ0=0;MQRankSum=-2.507;QD=19.20;ReadPosRankSum=4.263;VQSLOD=5.2698;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,22:25:59.93:493,60,0	1/1:0,8:8:23.97:197,24,0	0/0:14,0:11:20.83:0,21,189	0/0:12,0:7:6.02:0,6,64	1/1:6,20:27:61.93:495,62,0	1/1:4,16:20:12.95:313,13,0	1/1:3,7:10:17.97:148,18,0	1/1:7,26:33:49.12:608,49,0	1/1:1,14:15:38.94:320,39,0	1/1:3,17:22:52.96:425,53,0	1/1:4,20:24:56.90:467,57,0	1/1:0,6:6:17.98:148,18,0	1/1:2,10:12:26.96:222,27,0	1/1:3,13:16:44.53:354,45,0	1/1:2,14:16:35.95:296,36,0	1/1:1,10:11:20.93:172,21,0	1/1:3,27:30:71.91:591,72,0	1/1:0,14:14:38.96:320,39,0	1/1:7,21:28:33.93:485,34,0	1/1:3,26:29:62.15:516,62,0	1/1:1,12:13:32.96:271,33,0	1/1:1,6:7:11.98:99,12,0	1/1:2,11:13:26.93:221,27,0	1/1:2,8:10:23.97:197,24,0	1/1:0,25:26:67.96:548,68,0	1/1:3,20:23:59.92:493,60,0	1/1:2,19:21:44.95:369,45,0	1/1:0,8:8:23.97:197,24,0
chr10	34037540	.	G	GTC	26786.88	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-9.435;DP=834;FS=7.682;HRun=0;HaplotypeScore=87.5976;InbreedingCoeff=0.9988;MQ=66.28;MQ0=11;MQRankSum=0.555;QD=35.62;ReadPosRankSum=7.347;VQSLOD=6.8808;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,38:46:81.28:1403,81,0	1/1:1,10:11:27.09:468,27,0	0/0:33,0:25:51:0,51,657	0/0:49,0:31:61:0,61,760	1/1:2,13:15:27.09:468,27,0	1/1:2,22:24:57.20:987,57,0	1/1:1,18:19:36.12:623,36,0	1/1:10,21:30:63.20:1058,63,0	1/1:4,28:31:63.22:1091,63,0	1/1:1,42:42:99:2088,126,0	1/1:3,16:18:36.12:623,36,0	1/1:4,20:24:57.20:987,57,0	1/1:3,29:32:66.23:1143,66,0	1/1:2,20:22:48.16:831,48,0	1/1:2,34:36:78.27:1351,78,0	1/1:5,22:27:48.16:831,48,0	1/1:7,32:39:72.25:1247,72,0	1/1:3,36:38:78.27:1335,78,0	1/1:3,22:25:69.16:1090,69,0	1/1:1,25:26:54.18:935,54,0	1/1:3,31:34:57.20:987,57,0	1/1:2,18:20:39.13:676,39,0	1/1:2,26:29:66.05:1130,66,0	1/1:1,26:27:51.17:883,51,0	1/1:3,26:28:51.17:883,51,0	1/1:1,33:34:96.33:1647,96,0	1/1:3,37:41:75.15:1297,75,0	1/1:5,17:25:42.14:727,42,0
chr10	34038551	.	TAAA	T	8552.45	PASS	AB=1.000;AC=45;AF=0.804;AN=56;BaseQRankSum=-8.961;DP=400;FS=6.945;HRun=12;HaplotypeScore=66.7630;InbreedingCoeff=0.8630;MQ=68.77;MQ0=4;MQRankSum=-3.613;QD=25.68;ReadPosRankSum=4.188;VQSLOD=3.6502;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:21:51.11:0,51,839	1/1:1,6:7:14.96:168,15,0	0/0:13,0:8:15.64:0,16,228	0/1:11,0:8:5.23:5,0,144	1/1:0,16:16:35.99:433,36,0	1/1:1,12:13:33.10:417,33,0	1/1:1,8:9:21.06:263,21,0	1/1:2,27:26:72.08:837,72,0	1/1:3,8:11:12.03:152,12,0	1/1:4,20:24:54.08:627,54,0	1/1:0,15:15:41.96:488,42,0	0/0:8,0:8:18.04:0,18,187	1/1:1,9:10:21.06:265,21,0	1/1:2,12:14:24.07:303,24,0	1/1:0,10:10:18.06:227,18,0	1/1:0,4:4:6.02:76,6,0	1/1:2,17:19:36.06:437,36,0	1/1:4,18:22:15.29:431,15,0	1/1:4,5:9:14.98:177,15,0	1/1:2,21:23:62.98:721,63,0	1/1:3,5:8:15:187,15,0	1/1:1,10:11:29.98:341,30,0	0/0:13,0:12:21.48:0,21,203	0/0:12,0:11:18:0,18,179	1/1:1,14:15:33.08:417,33,0	1/1:1,15:16:45.04:520,45,0	1/1:4,24:27:63.16:794,63,0	1/1:1,8:9:21.06:265,21,0
chr10	34038563	.	AT	A	738.71	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-3.929;DP=408;FS=5.993;HRun=1;HaplotypeScore=83.4652;InbreedingCoeff=0.9029;MQ=69.62;MQ0=3;MQRankSum=1.837;QD=15.39;ReadPosRankSum=-0.942;VQSLOD=3.0337;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,2:21:29.87:236,30,0	0/0:6,0:6:14.27:0,14,81	0/0:15,0:11:29.46:0,29,251	0/0:10,1:8:1.44:0,1,97	0/0:17,0:17:36.61:0,37,185	0/0:13,0:13:34.12:0,34,181	0/0:10,0:10:23.42:0,23,117	0/0:33,0:31:73.28:0,73,396	0/0:13,0:13:25.83:0,26,159	0/0:21,0:21:36.54:0,37,230	0/0:19,0:19:43.38:0,43,253	1/1:0,7:7:18.06:247,18,0	0/0:12,0:12:27.37:0,27,139	0/0:14,0:14:28.85:0,29,156	0/0:13,0:13:25.23:0,25,149	0/0:5,0:5:8.75:0,9,54	0/0:19,0:19:39.20:0,39,205	0/0:20,0:20:33.76:0,34,183	0/0:7,0:7:17.63:0,18,119	0/0:24,0:24:55.49:0,55,295	0/0:7,0:7:16.79:0,17,87	0/0:12,0:12:33.20:0,33,177	1/1:1,9:9:15.35:207,15,0	1/1:1,9:9:15.05:204,15,0	0/0:15,0:15:33.08:0,33,166	0/0:19,0:19:53.74:0,54,329	0/0:25,0:25:54.78:0,55,286	0/0:10,0:10:25.25:0,25,136
chr10	34041674	.	A	ATATTC	1149.37	PASS	AB=0.745;AC=12;AF=0.250;AN=48;BaseQRankSum=1.125;DP=185;FS=9.187;HRun=0;HaplotypeScore=74.1849;InbreedingCoeff=-0.2270;MQ=83.91;MQ0=7;MQRankSum=-2.266;QD=19.82;ReadPosRankSum=3.756;VQSLOD=1.8843;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:4,0:4:29.56:49,0,30	0/1:3,1:4:86.37:86,0,113	0/0:45,0:27:55.23:0,55,826	0/0:27,0:9:21.51:0,22,326	0/0:7,0:7:18.06:0,18,261	./.	0/0:1,0:1:3.01:0,3,54	0/1:6,10:13:99:360,0,197	0/0:2,1:2:6:0,6,73	0/1:2,1:3:33.69:34,0,78	0/0:3,2:3:6.02:0,6,76	0/0:6,0:6:18.06:0,18,408	0/0:3,0:3:9.03:0,9,142	0/0:3,1:2:6.02:0,6,104	0/1:1,1:2:28.05:92,0,28	0/1:1,1:2:48.13:92,0,48	./.	0/0:3,0:3:9.03:0,9,140	0/1:6,1:4:39.92:40,0,111	0/1:6,2:6:99:124,0,119	./.	./.	0/0:8,0:8:24.08:0,24,554	0/0:4,0:4:12.04:0,12,276	0/0:6,2:5:15.05:0,15,235	0/1:3,1:4:45.32:161,0,45	0/1:1,4:4:21.52:180,0,22	1/1:1,1:1:3.01:70,3,0
chr10	34041681	.	A	AC	213.03	PASS	AB=0.926;AC=14;AF=0.280;AN=50;BaseQRankSum=1.721;DP=199;FS=9.505;HRun=0;HaplotypeScore=61.9576;InbreedingCoeff=-0.0605;MQ=83.87;MQ0=7;MQRankSum=-0.893;QD=2.73;ReadPosRankSum=-1.371;VQSLOD=1.0733;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:5:12.45:0,12,55	0/1:4,0:4:7.18:7,0,17	0/0:45,0:26:8.76:0,9,330	0/0:25,0:8:7.51:0,8,127	0/0:7,0:7:17.85:0,18,135	./.	0/0:3,0:3:8.81:0,9,54	0/1:15,2:14:34.04:83,0,34	0/0:3,0:2:5.93:0,6,40	0/0:3,1:3:1.72:0,2,30	0/1:7,0:5:33.12:54,0,33	0/0:6,0:6:16.91:0,17,82	0/0:3,0:3:4.68:0,5,48	0/1:5,0:3:9:11,0,9	1/1:3,0:3:2.36:16,2,0	1/1:1,1:2:1.80:6,2,0	0/0:3,0:2:2.90:0,3,16	0/1:2,2:4:12.52:83,0,13	0/1:9,0:5:4.82:5,0,93	0/1:8,0:6:12.84:44,0,13	./.	./.	0/0:8,0:8:22.50:0,22,111	0/0:4,0:4:8.37:0,8,40	0/1:8,1:6:0.10:0,0,27	0/1:3,1:4:21.61:22,0,32	0/1:6,0:5:0.67:12,0,1	0/0:2,0:1:2.22:0,2,7
chr10	34041687	.	A	AC	1210.09	PASS	AB=0.908;AC=28;AF=0.538;AN=52;BaseQRankSum=-3.054;DP=202;FS=10.732;HRun=0;HaplotypeScore=55.1201;InbreedingCoeff=-0.1487;MQ=82.11;MQ0=5;MQRankSum=0.342;QD=8.40;ReadPosRankSum=1.271;VQSLOD=2.6666;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:5:8.53:0,9,29	0/1:2,1:5:10.66:22,0,11	0/0:42,0:23:38.95:0,39,383	0/1:24,0:8:3.84:4,0,108	0/1:8,0:8:16.34:16,0,96	./.	0/1:3,0:3:10.92:46,0,11	0/1:19,0:16:56.41:116,0,56	0/0:3,0:2:3.63:0,4,13	0/0:4,0:3:3.78:0,4,46	0/1:6,0:5:29:58,0,29	1/1:0,6:6:18.06:227,18,0	0/0:2,0:3:1.62:0,2,42	1/1:3,1:3:7.49:58,7,0	0/1:3,0:4:8.75:38,0,9	0/1:2,0:2:9.08:9,0,14	1/1:4,0:3:5.99:48,6,0	0/1:4,0:4:10.12:75,0,10	0/1:11,0:7:48.67:49,0,85	0/1:3,0:6:8.94:35,0,9	1/1:1,0:1:2.99:24,3,0	./.	1/1:0,7:7:21.07:264,21,0	1/1:0,4:4:12.04:150,12,0	0/1:7,1:7:2.77:63,0,3	0/1:6,0:6:41.80:43,0,42	0/1:5,0:4:10.07:10,0,15	1/1:1,0:1:2.37:8,2,0
chr10	34041749	.	CTT	C	4421.05	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=-8.436;DP=264;FS=0.791;HRun=11;HaplotypeScore=48.4132;InbreedingCoeff=0.8831;MQ=70.58;MQ0=11;MQRankSum=-0.693;QD=25.26;ReadPosRankSum=1.338;VQSLOD=4.3429;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:0,0:18:42.42:0,42,145	1/1:0,6:6:18.05:191,18,0	0/0:21,0:10:17.60:0,18,175	0/0:17,0:10:15.89:0,16,155	1/1:0,9:9:27.07:287,27,0	1/1:1,7:7:21.05:223,21,0	1/1:2,5:7:15.04:160,15,0	1/1:10,22:29:62.92:610,63,0	1/1:2,2:4:8.86:83,9,0	1/1:2,5:7:15.02:152,15,0	1/1:0,6:6:18.05:192,18,0	0/0:3,0:13:29.82:0,30,103	1/1:0,7:7:21.05:223,21,0	1/1:0,4:4:9.02:96,9,0	1/1:1,10:11:30.08:319,30,0	0/0:1,0:1:0:0,0,0	1/1:0,10:10:27.07:288,27,0	1/1:2,7:9:18.02:192,18,0	1/1:0,6:5:12.03:127,12,0	1/1:0,4:4:12.03:128,12,0	1/1:0,6:6:12.03:128,12,0	1/1:2,2:3:6.02:64,6,0	0/0:5,0:12:22.96:0,23,94	0/0:1,0:6:14.97:0,15,52	1/1:2,9:11:27.05:287,27,0	1/1:0,10:9:27.07:287,27,0	1/1:0,5:5:12.03:128,12,0	1/1:1,8:8:24.06:256,24,0
chr10	34043557	.	G	GACACACACACACAC	4959.27	PASS	AB=1.000;AC=46;AF=0.821;AN=56;BaseQRankSum=-2.708;DP=640;FS=4.800;HRun=0;HaplotypeScore=297.3533;InbreedingCoeff=0.3322;MQ=41.85;MQ0=7;MQRankSum=-0.041;QD=8.82;ReadPosRankSum=3.242;VQSLOD=3.2342;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:31,0:31:22:69,0,22	1/1:11,0:11:8.99:157,9,0	0/0:19,0:9:8.21:0,8,178	0/0:36,0:19:11.52:0,12,177	0/0:23,0:23:2.57:0,3,14	1/1:34,0:32:12.92:303,13,0	0/1:22,0:22:0.64:48,0,1	1/1:27,0:26:29.44:293,29,0	1/1:31,0:29:6.46:50,6,0	1/1:26,0:26:32.18:456,32,0	1/1:11,0:11:8.95:163,9,0	1/1:18,0:18:9.01:172,9,0	1/1:14,0:13:6.91:112,7,0	1/1:17,0:17:6.48:100,6,0	1/1:27,0:27:6.87:141,7,0	1/1:22,0:21:12.03:228,12,0	1/1:17,0:17:4.08:41,4,0	1/1:18,0:18:19.20:279,19,0	1/1:21,0:19:29.21:352,29,0	1/1:27,0:27:6.02:163,6,0	1/1:31,0:29:1.80:53,2,0	1/1:20,0:20:9.35:182,9,0	1/1:11,7:22:0.47:1,0,0	0/1:31,0:30:0.75:353,0,1	0/1:21,0:21:53.64:235,0,54	1/1:29,0:29:22.68:428,23,0	1/1:20,0:20:14.06:265,14,0	1/1:14,0:14:17.95:316,18,0
chr10	34043582	.	A	AAGT	1420.69	PASS	AB=0.924;AC=20;AF=0.357;AN=56;BaseQRankSum=6.846;DP=598;FS=5.146;HRun=0;HaplotypeScore=179.8995;InbreedingCoeff=-0.3943;MQ=50.37;MQ0=5;MQRankSum=-5.839;QD=3.79;ReadPosRankSum=3.087;VQSLOD=2.2552;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:14,2:17:54.91:55,0,66	0/1:11,0:11:22.79:23,0,95	0/0:35,0:26:69.04:0,69,1236	0/0:39,0:27:76.49:0,76,1305	0/1:16,2:18:9.55:10,0,22	0/0:29,0:27:20.69:0,21,219	0/1:20,0:20:3.51:38,0,4	0/1:25,0:30:99:110,0,403	0/1:27,2:27:56.94:85,0,57	0/1:18,3:25:99:307,0,660	0/0:7,1:8:14.74:0,15,143	0/0:20,0:20:29.61:0,30,459	1/1:17,0:16:2.60:24,3,0	0/1:14,0:14:43.84:44,0,101	0/1:14,2:16:25.85:26,0,125	0/1:24,0:23:39.30:39,0,173	0/0:15,0:15:14.77:0,15,127	0/1:14,1:16:61.39:61,0,399	0/1:22,0:19:99:247,0,375	0/0:20,0:22:3.97:0,4,123	0/0:25,0:24:11.38:0,11,139	0/1:17,2:22:12.01:12,0,83	0/1:19,0:19:0.28:0,0,251	0/0:30,0:29:42.42:0,42,724	0/1:14,3:18:46.40:46,0,135	0/1:21,0:21:99:106,0,609	0/1:22,0:22:99:157,0,179	0/1:10,3:13:99:186,0,214
chr10	34043583	.	C	CAAGTCAATCAGTAGA	42825.03	PASS	AB=0.829;AC=25;AF=0.446;AN=56;BaseQRankSum=0.809;DP=720;FS=53.460;HRun=0;HaplotypeScore=343.3988;InbreedingCoeff=-0.4854;MQ=48.92;MQ0=5;MQRankSum=-10.257;QD=74.35;ReadPosRankSum=2.561;VQSLOD=3.0793;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,9:26:21.40:2023,21,0	0/1:5,1:11:31.01:855,0,31	0/0:36,0:27:75.25:0,75,2515	0/0:39,0:27:75.59:0,76,2555	1/1:22,6:30:36.07:1605,36,0	0/1:31,5:34:99:1245,0,120	0/1:18,5:25:4.27:1687,0,4	0/1:47,0:46:51.98:6257,0,52	0/1:24,8:33:70.15:2175,0,70	0/1:31,0:34:99:3780,0,370	0/1:8,1:11:99:573,0,144	0/0:20,0:20:21.18:0,21,853	0/1:15,7:21:8.19:1517,0,8	0/1:8,7:16:99:567,0,142	0/1:17,3:25:99:1774,0,128	0/1:23,0:28:99:1505,0,180	0/1:14,0:14:91.03:903,0,91	0/1:17,0:18:99:1867,0,180	0/1:18,6:22:99:2273,0,187	0/1:26,0:27:99:908,0,135	0/1:25,1:26:17.61:1289,0,18	0/1:24,0:26:95.59:1722,0,96	0/0:19,0:19:14.67:0,15,570	0/0:30,0:29:44.85:0,45,1520	0/1:16,2:21:98.84:1584,0,99	0/1:23,6:30:99:2965,0,433	0/1:18,8:26:99:2104,0,125	0/1:8,0:15:25.87:1647,0,26
chr10	34044913	.	CATGG	C	29853.43	PASS	AB=0.957;AC=53;AF=0.946;AN=56;BaseQRankSum=-3.472;DP=694;FS=0.732;HRun=0;HaplotypeScore=135.9235;InbreedingCoeff=0.8064;MQ=76.66;MQ0=0;MQRankSum=-8.778;QD=43.84;ReadPosRankSum=5.561;VQSLOD=5.4378;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,27:29:69.24:1269,69,0	1/1:1,5:6:12.04:221,12,0	0/1:21,1:22:1.04:1,0,1216	0/0:13,0:13:30.08:0,30,648	1/1:1,16:17:45.15:824,45,0	1/1:3,21:24:60.21:1104,60,0	1/1:6,36:42:90.78:1653,91,0	1/1:7,22:29:66.23:1208,66,0	1/1:2,29:31:78.27:1435,78,0	1/1:0,24:24:72.25:1325,72,0	1/1:1,6:7:18.06:331,18,0	1/1:2,22:24:60.21:1104,60,0	1/1:3,14:17:35.68:662,36,0	1/1:3,29:32:78.27:1435,78,0	1/1:3,27:30:75.26:1380,75,0	1/1:1,24:25:66.23:1214,66,0	1/1:3,35:38:99:1822,99,0	1/1:3,32:35:87.30:1601,87,0	1/1:3,20:22:57.20:1042,57,0	1/1:0,10:10:30.10:552,30,0	1/1:6,57:63:99:2757,151,0	1/1:1,14:15:42.14:768,42,0	1/1:0,10:10:30.10:549,30,0	1/1:3,44:47:99:2153,117,0	1/1:1,15:16:33.11:607,33,0	1/1:2,21:23:57.17:1016,57,0	1/1:4,25:29:66.23:1214,66,0	1/1:1,12:13:33.11:607,33,0
chr10	34045580	.	TC	T	443.07	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.526;DP=346;FS=0.984;HRun=4;HaplotypeScore=36.0986;InbreedingCoeff=0.5811;MQ=53.23;MQ0=9;MQRankSum=-1.392;QD=24.62;ReadPosRankSum=-0.284;VQSLOD=2.1153;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,15:18:45.14:537,45,0	0/0:6,0:6:18.05:0,18,236	0/0:9,0:2:3.01:0,3,42	0/0:18,0:7:14.83:0,15,167	0/0:9,0:9:21.07:0,21,294	0/0:18,0:18:51.17:0,51,706	0/0:24,0:23:63.17:0,63,858	0/0:18,0:18:48.16:0,48,668	0/0:14,0:14:42.11:0,42,553	0/0:16,0:15:42.13:0,42,573	0/0:14,0:14:39.13:0,39,545	0/0:8,0:8:24.08:0,24,336	0/0:11,0:10:30.10:0,30,409	0/0:10,0:10:30.10:0,30,420	0/0:12,0:12:36.11:0,36,484	0/0:12,0:12:33.10:0,33,446	0/0:16,0:16:36.10:0,36,488	0/0:17,0:17:39.13:0,39,543	0/0:12,0:9:24.08:0,24,335	0/0:8,0:8:15.05:0,15,210	0/0:11,0:11:24.06:0,24,318	0/0:12,0:12:33.11:0,33,461	0/0:1,0:1:3.01:0,3,42	0/0:3,0:1:3.01:0,3,42	0/0:12,0:12:33.11:0,33,460	0/0:15,0:15:45.15:0,45,624	0/0:19,0:19:51.17:0,51,707	0/0:3,0:2:6.02:0,6,84
chr10	34045968	.	T	TAA	15204.54	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-11.181;DP=477;FS=15.262;HRun=7;HaplotypeScore=55.7488;InbreedingCoeff=0.9551;MQ=63.93;MQ0=1;MQRankSum=0.265;QD=38.79;ReadPosRankSum=1.880;VQSLOD=3.3290;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:81.24:0,81,943	1/1:0,10:10:30.06:463,30,0	0/0:9,0:9:17.51:0,18,169	0/0:15,0:14:27.67:0,28,330	1/1:2,19:21:48.13:749,48,0	1/1:4,21:25:57.19:935,57,0	1/1:2,7:10:15.05:246,15,0	1/1:7,31:38:96.20:1471,96,0	1/1:2,13:15:33.06:540,33,0	1/1:1,15:16:45.14:714,45,0	1/1:3,21:24:63.06:920,63,0	0/0:13,0:13:36.09:0,36,409	1/1:1,5:7:15.05:246,15,0	1/1:0,12:12:30:492,30,0	1/1:2,15:17:44.96:716,45,0	1/1:1,15:17:39.13:640,39,0	1/1:1,23:25:56.68:891,57,0	1/1:0,23:23:66.23:1083,66,0	1/1:3,10:13:30.10:492,30,0	1/1:0,8:8:24.05:365,24,0	1/1:5,7:12:21.07:328,21,0	1/1:3,0:3:3.01:48,3,0	0/0:12,0:12:36.11:0,36,419	0/0:9,0:9:24.07:0,24,280	1/1:1,15:16:36.12:591,36,0	1/1:3,30:33:90.26:1402,90,0	1/1:0,19:21:48.01:788,48,0	1/1:0,24:25:66.23:1083,66,0
chr10	34046044	.	T	TA	1554	PASS	AB=0.794;AC=8;AF=0.143;AN=56;BaseQRankSum=-6.507;DP=486;FS=0.000;HRun=10;HaplotypeScore=56.9114;InbreedingCoeff=0.7728;MQ=64.94;MQ0=0;MQRankSum=0.605;QD=19.92;ReadPosRankSum=-0.121;VQSLOD=4.2028;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,28:36:13.77:759,14,0	0/0:9,0:9:23.96:0,24,197	0/0:4,0:5:6.49:0,6,26	0/1:2,0:2:8.62:10,0,9	0/0:23,0:23:59.92:0,60,492	0/0:19,0:20:55.97:0,56,449	0/0:12,0:12:23.95:0,24,197	0/0:34,0:34:65.89:0,66,540	0/0:18,0:19:40.94:0,41,323	0/0:21,0:21:50.93:0,51,419	0/0:19,1:20:12.96:0,13,313	1/1:4,13:17:36.09:384,36,0	0/0:7,0:7:11.98:0,12,99	0/0:16,0:16:44.84:0,45,369	0/0:15,0:17:39.93:0,40,307	0/0:13,0:13:35.96:0,36,296	0/0:28,0:29:55.97:0,56,449	0/0:23,0:23:44.86:0,45,366	0/0:15,0:15:35.94:0,36,295	0/0:17,0:17:41.92:0,42,345	0/0:13,0:14:31.99:0,32,252	0/0:12,0:12:26.96:0,27,222	0/1:3,7:10:0.58:200,0,1	1/1:1,12:13:33.08:352,33,0	0/0:17,0:18:34.99:0,35,277	0/0:26,0:26:56.89:0,57,464	0/0:22,0:22:44.93:0,45,367	0/0:16,0:16:44.95:0,45,369
chr10	34046303	.	CTCAT	C	1633.55	PASS	AB=0.950;AC=7;AF=0.125;AN=56;BaseQRankSum=9.191;DP=620;FS=0.619;HRun=0;HaplotypeScore=97.4749;InbreedingCoeff=0.8586;MQ=58.35;MQ0=4;MQRankSum=2.059;QD=19.22;ReadPosRankSum=2.036;VQSLOD=3.0128;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,111,2659	0/0:13,0:13:33.11:0,33,792	0/0:17,0:13:21.07:0,21,466	0/0:14,0:9:12.09:0,12,197	0/0:17,0:17:42.14:0,42,1011	0/0:25,0:25:57.20:0,57,1339	0/0:19,0:19:36.12:0,36,864	0/0:24,0:24:48.16:0,48,1121	0/0:27,0:27:63.22:0,63,1507	0/0:25,0:25:54.19:0,54,1298	0/0:19,1:20:9.02:0,9,1226	1/1:5,16:21:32.92:524,33,0	0/0:17,0:17:45.15:0,45,1059	0/0:13,0:13:27.08:0,27,603	0/0:33,0:33:72.25:0,72,1727	0/0:18,0:18:45.07:0,45,1055	0/0:36,0:36:69.21:0,69,1587	0/0:18,0:18:42.14:0,42,993	0/0:27,0:25:39.13:0,39,908	0/0:22,0:22:57.20:0,57,1353	0/0:15,0:15:45.15:0,45,1072	0/1:18,1:19:3.04:3,0,886	1/1:7,16:23:41.81:672,42,0	1/1:6,16:22:36.12:578,36,0	0/0:21,0:20:48.14:0,48,1104	0/0:27,0:27:63.22:0,63,1511	0/0:21,0:21:36.12:0,36,863	0/0:14,0:14:36.12:0,36,849
chr10	34046896	.	CT	C	5107	PASS	AB=0.590;AC=44;AF=0.786;AN=56;BaseQRankSum=-0.777;DP=327;FS=1.616;HRun=11;HaplotypeScore=37.0821;InbreedingCoeff=0.6656;MQ=70.88;MQ0=0;MQRankSum=-0.774;QD=17.98;ReadPosRankSum=1.793;VQSLOD=5.5302;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,7:12:23:178,23,0	1/1:0,5:5:14.98:123,15,0	0/0:11,0:6:3.68:0,4,55	0/0:15,0:9:19.44:0,19,164	1/1:2,16:18:44.16:352,44,0	1/1:3,15:18:41.93:345,42,0	1/1:1,4:5:11.98:99,12,0	1/1:5,24:30:70.93:572,71,0	1/1:2,3:5:5.99:49,6,0	1/1:2,14:16:41.95:345,42,0	0/1:5,7:13:12.01:109,0,12	0/0:5,0:5:15.02:0,15,151	1/1:0,8:8:14.98:123,15,0	1/1:1,8:9:23.97:197,24,0	1/1:2,6:8:17.97:148,18,0	1/1:0,4:4:11.99:99,12,0	1/1:0,14:14:35.92:290,36,0	1/1:5,12:17:32.95:271,33,0	1/1:3,8:12:25.98:200,26,0	0/1:3,10:14:28.95:193,0,29	1/1:0,4:4:11.99:99,12,0	1/1:1,0:1:2.98:22,3,0	0/0:7,0:8:20.89:0,21,206	0/0:4,0:4:9.02:0,9,96	1/1:2,11:14:25.99:203,26,0	1/1:1,18:19:56.71:451,57,0	1/1:2,16:18:32.96:271,33,0	1/1:2,18:20:26.74:370,27,0
chr10	34047024	.	G	GA	1138.17	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-5.965;DP=517;FS=5.572;HRun=8;HaplotypeScore=59.2238;InbreedingCoeff=0.9910;MQ=74.34;MQ0=2;MQRankSum=-1.263;QD=23.23;ReadPosRankSum=2.805;VQSLOD=4.4379;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:66.02:0,66,598	0/0:12,0:12:36.01:0,36,325	0/0:27,0:19:29.93:0,30,232	0/0:22,1:18:14.06:0,14,115	0/0:15,0:15:42.02:0,42,384	0/0:27,0:27:62.99:0,63,567	0/0:19,0:19:50.96:0,51,458	0/0:24,0:24:51.01:0,51,467	0/0:18,0:18:48.03:0,48,439	0/0:8,0:8:24.01:0,24,217	0/0:17,0:17:48.01:0,48,435	1/1:0,11:11:30.09:346,30,0	0/0:16,0:16:45:0,45,407	0/0:17,0:17:44.99:0,45,400	0/0:15,0:15:29.99:0,30,274	0/0:15,0:15:33.02:0,33,301	0/0:32,0:31:80.22:0,80,740	0/0:17,0:17:36.01:0,36,329	0/0:12,0:11:27.01:0,27,247	0/0:20,0:20:41.99:0,42,379	0/0:15,0:15:38.99:0,39,352	0/0:17,0:17:42.01:0,42,380	1/1:1,16:17:42.12:485,42,0	1/1:3,18:21:39.12:450,39,0	0/0:18,0:18:45.02:0,45,410	0/0:25,0:25:60.01:0,60,545	0/0:22,0:22:59.63:0,60,531	0/0:13,0:13:39.02:0,39,357
chr10	34048150	.	GA	G	560.20	PASS	AB=0.972;AC=3;AF=0.054;AN=56;BaseQRankSum=7.167;DP=411;FS=0.000;HRun=9;HaplotypeScore=42.5344;InbreedingCoeff=0.7947;MQ=59.34;MQ0=12;MQRankSum=-4.327;QD=8.62;ReadPosRankSum=0.325;VQSLOD=0.7584;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,23:30:72.03:655,72,0	0/0:10,0:10:30.09:0,30,346	0/0:32,0:5:14.96:0,15,128	0/1:34,0:5:1.05:1,0,1	0/0:16,0:16:45.12:0,45,510	0/0:13,0:13:39.12:0,39,450	0/0:11,0:11:30.03:0,30,321	0/0:32,0:32:84.12:0,84,916	0/0:6,0:6:12.04:0,12,138	0/0:11,0:11:24.07:0,24,277	0/0:19,0:18:51.10:0,51,541	0/0:7,0:7:21.05:0,21,232	0/0:12,0:12:30.07:0,30,336	0/0:5,0:5:15.04:0,15,173	0/0:7,0:7:21.06:0,21,242	0/0:8,0:8:24.06:0,24,267	0/0:17,0:17:41.20:0,41,406	0/0:13,0:13:36.09:0,36,402	0/0:20,0:19:48.14:0,48,554	0/0:15,0:15:39.09:0,39,425	0/0:8,0:8:24.01:0,24,250	0/0:6,0:5:12.04:0,12,138	0/0:7,0:7:18.05:0,18,208	0/0:8,0:8:21.03:0,21,219	0/0:19,0:19:54.15:0,54,615	0/0:16,0:16:39.12:0,39,450	0/0:17,0:17:39.09:0,39,429	0/0:10,0:10:30.09:0,30,346
chr10	34048173	.	AAAAT	A	1077.92	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.756;DP=419;FS=0.849;HRun=0;HaplotypeScore=67.3237;InbreedingCoeff=0.9043;MQ=66.56;MQ0=4;MQRankSum=-7.491;QD=30.80;ReadPosRankSum=1.513;VQSLOD=3.5833;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,30:35:63.21:1173,63,0	0/0:12,0:12:36.09:0,36,855	0/0:26,0:8:17.55:0,18,339	0/0:29,0:8:21.49:0,21,377	0/0:18,0:18:54.19:0,54,1400	0/0:14,0:14:42.14:0,42,1103	0/0:10,0:10:27.09:0,27,727	0/0:31,0:31:87.29:0,87,2161	0/0:6,0:6:18.06:0,18,480	0/0:16,0:16:45.15:0,45,1049	0/0:15,0:15:45.15:0,45,1214	0/0:8,0:8:24.08:0,24,619	0/0:12,0:12:36.11:0,36,886	0/0:8,0:8:24.08:0,24,618	0/0:14,0:13:42.13:0,42,1017	0/0:8,0:8:21.07:0,21,516	0/0:19,0:19:54.19:0,54,1457	0/0:14,0:14:42.14:0,42,1094	0/0:20,0:20:54.18:0,54,1225	0/0:14,0:14:39.13:0,39,962	0/0:9,0:9:27.09:0,27,593	0/0:6,0:6:18.06:0,18,413	0/0:6,0:6:18.06:0,18,486	0/0:4,0:4:9.03:0,9,211	0/0:18,0:18:54.19:0,54,1338	0/0:20,0:20:60.21:0,60,1538	0/0:16,0:16:48.16:0,48,1265	0/0:11,0:11:33.11:0,33,845
chr10	34050038	.	GAC	G	513.02	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.750;DP=643;FS=0.000;HRun=0;HaplotypeScore=81.0323;InbreedingCoeff=0.9969;MQ=78.89;MQ0=1;MQRankSum=-0.981;QD=25.65;ReadPosRankSum=-0.015;VQSLOD=3.7929;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,18:20:46.45:608,46,0	0/0:10,0:10:24.08:0,24,402	0/0:33,0:33:58.25:0,58,990	0/0:28,0:24:50.79:0,51,621	0/0:40,0:38:99:0,111,1800	0/0:23,0:23:66.23:0,66,1101	0/0:13,0:13:36.11:0,36,573	0/0:24,0:24:54.17:0,54,857	0/0:19,0:19:51.17:0,51,853	0/0:39,0:38:99:0,108,1754	0/0:29,0:29:81.24:0,81,1299	0/0:23,0:23:69.22:0,69,1116	0/0:17,0:17:51.16:0,51,816	0/0:15,0:15:42.14:0,42,703	0/0:19,0:19:54.17:0,54,878	0/0:17,0:17:48.13:0,48,748	0/0:26,1:27:31.06:0,31,1059	0/0:14,0:14:36.12:0,36,586	0/0:26,0:26:54.17:0,54,873	0/0:29,1:30:40.08:0,40,1204	0/0:15,0:15:39.13:0,39,652	0/0:20,0:20:57.19:0,57,946	0/0:25,0:25:66.23:0,66,1100	0/0:12,0:12:33.11:0,33,552	0/0:20,0:20:48.16:0,48,780	0/0:33,0:33:99:0,99,1618	0/0:34,0:34:84.29:0,84,1396	0/0:18,0:18:51.17:0,51,853
chr10	34050661	.	G	GCA	12391.07	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=2.557;DP=677;FS=5.265;HRun=0;HaplotypeScore=176.5786;InbreedingCoeff=0.8841;MQ=65.04;MQ0=3;MQRankSum=-1.612;QD=20.48;ReadPosRankSum=2.121;VQSLOD=4.8752;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:34,14:48:67.14:971,67,0	1/1:7,5:12:27.56:415,28,0	0/0:34,0:24:35.78:0,36,533	0/0:38,0:31:69.06:0,69,798	1/1:14,9:23:17.14:173,17,0	1/1:11,3:13:27.09:407,27,0	1/1:7,13:22:12.04:174,12,0	1/1:10,27:37:93.99:1312,94,0	1/1:14,6:20:37.70:526,38,0	1/1:12,18:30:79.02:1136,79,0	1/1:4,4:8:10.90:101,11,0	1/1:12,7:19:18.34:310,18,0	1/1:6,14:22:21.01:278,21,0	1/1:10,13:24:17.43:284,17,0	1/1:3,18:21:24.08:372,24,0	1/1:6,16:22:18.04:260,18,0	1/1:8,22:30:30.08:446,30,0	1/1:12,2:14:24.50:323,24,0	1/1:6,11:17:39.09:527,39,0	1/1:6,20:27:32.61:451,33,0	1/1:24,2:26:45.13:679,45,0	1/1:16,8:24:40.93:582,41,0	1/1:7,2:15:5.35:59,5,0	1/1:11,26:37:18.79:217,19,0	1/1:8,18:27:30.10:471,30,0	1/1:13,8:21:42.33:584,42,0	1/1:20,10:30:75.08:1060,75,0	1/1:3,11:14:18.06:273,18,0
chr10	34050672	.	T	TACAC	10543.18	PASS	AC=52;AF=0.963;AN=54;BaseQRankSum=-1.552;DP=720;FS=10.086;HRun=0;HaplotypeScore=182.6076;InbreedingCoeff=0.5727;MQ=54.75;MQ0=6;MQRankSum=-0.837;QD=16.10;ReadPosRankSum=-0.169;VQSLOD=3.3232;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:54:34.17:663,34,0	1/1:9,4:13:15.05:306,15,0	0/0:32,0:18:5.33:0,5,51	./.	1/1:9,13:24:8.89:207,9,0	1/1:12,2:14:15.05:280,15,0	1/1:22,2:24:20.98:378,21,0	1/1:34,0:35:26.71:185,27,0	1/1:11,13:26:15.05:325,15,0	1/1:25,5:31:29.60:716,30,0	1/1:10,3:13:15.02:220,15,0	1/1:19,0:21:11.95:135,12,0	1/1:23,2:25:24.61:381,25,0	1/1:20,6:26:11.95:486,12,0	1/1:21,9:29:48.12:854,48,0	1/1:18,1:23:21.24:329,21,0	1/1:28,3:32:23.90:496,24,0	1/1:10,6:18:7.07:221,7,0	1/1:18,0:16:27.43:247,27,0	1/1:17,6:25:23.16:474,23,0	1/1:25,0:25:15.92:171,16,0	1/1:20,6:25:27.06:461,27,0	1/1:13,0:14:4.93:28,5,0	1/1:34,1:38:19.37:263,19,0	1/1:16,10:26:36.11:760,36,0	1/1:11,10:23:44.59:586,45,0	1/1:23,9:32:44.75:810,45,0	1/1:12,5:17:32.46:561,32,0
chr10	34051522	.	C	CTG	1802.67	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-7.827;DP=827;FS=1.905;HRun=0;HaplotypeScore=114.0549;InbreedingCoeff=0.9455;MQ=67.49;MQ0=1;MQRankSum=1.694;QD=29.55;ReadPosRankSum=0.343;VQSLOD=4.8515;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:12,49:61:27.51:1897,28,0	0/0:8,0:8:18.05:0,18,216	0/0:36,0:31:23.89:0,24,372	0/0:36,0:27:13.65:0,14,400	0/0:29,0:29:66.19:0,66,778	0/0:19,0:19:36.11:0,36,431	0/0:33,0:35:72.05:0,72,841	0/0:24,0:25:47.97:0,48,543	0/0:30,0:32:68.81:0,69,752	0/0:29,0:29:60.01:0,60,698	0/0:16,0:18:41.82:0,42,471	0/0:30,0:30:72.21:0,72,853	0/0:26,0:27:69.02:0,69,785	0/0:34,0:35:72.04:0,72,829	0/0:36,0:36:84.25:0,84,1007	0/0:25,0:25:57.17:0,57,674	0/0:38,0:39:96.13:0,96,1128	0/0:26,0:26:68.02:0,68,796	0/0:15,0:13:15.01:0,15,154	0/0:25,0:27:63.02:0,63,728	0/0:83,0:84:99:0,174,2042	0/0:13,0:14:29.92:0,30,337	0/0:14,0:15:23.90:0,24,265	0/0:47,0:47:99:0,99,1175	0/0:11,0:11:24.07:0,24,288	0/0:19,0:18:36.11:0,36,430	0/0:32,0:32:60.18:0,60,719	0/0:17,0:17:21.06:0,21,252
chr10	34051891	.	GGATAGATA	G	527.27	PASS	AC=12;AF=1.000;AN=12;DP=261;FS=0.000;HRun=0;HaplotypeScore=59.8289;MQ=19.50;MQ0=168;QD=7.53;VQSLOD=1.0526;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	./.	./.	./.	./.	./.	1/1:11,0:4:5.96:45,6,0	./.	./.	./.	./.	./.	./.	./.	./.	./.	1/1:17,4:18:2.88:69,3,0	./.	1/1:6,5:7:2.97:20,3,0	./.	./.	./.	1/1:9,2:6:9.03:221,9,0	1/1:10,0:6:2.98:21,3,0	1/1:2,4:4:9.03:220,9,0
chr10	34051955	.	GGATA	G	621.74	PASS	AB=0.784;AC=10;AF=0.556;AN=18;BaseQRankSum=0.448;DP=238;FS=11.233;HRun=0;HaplotypeScore=105.6936;MQ=28.77;MQ0=107;MQRankSum=-1.538;QD=8.88;ReadPosRankSum=-1.109;VQSLOD=1.9296;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	0/1:6,19:24:0:0,0,0	1/1:9,0:8:2.84:31,3,0	1/1:11,0:6:18.06:230,18,0	./.	1/1:10,0:9:14.83:181,15,0	./.	0/0:10,0:8:2.04:0,2,6	0/0:11,0:10:3.01:0,3,36	./.	./.	./.	./.	1/1:11,0:9:4.42:241,4,0	./.	./.	./.	./.	./.	0/0:16,0:14:24.03:0,24,356	0/1:4,0:4:31.85:32,0,32	./.	./.	./.	./.
chr10	34053215	.	TAG	T	218.85	PASS	AB=1.000;AC=12;AF=0.857;AN=14;BaseQRankSum=0.480;DP=158;FS=0.000;HRun=0;HaplotypeScore=47.3232;MQ=18.80;MQ0=86;MQRankSum=-1.271;QD=4.21;ReadPosRankSum=0.480;VQSLOD=1.8556;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	1/1:1,2:2:2.50:9,2,0	./.	./.	./.	./.	./.	./.	./.	1/1:3,5:2:6.02:85,6,0	./.	./.	./.	./.	0/1:4,0:2:0:0,0,0	0/1:13,0:7:8.18:29,0,8	./.	./.	./.	1/1:1,9:9:3.23:43,3,0	./.	./.	./.	./.	./.	1/1:4,1:3:6.02:83,6,0	./.	1/1:5,4:6:3.01:42,3,0
chr10	34053217	.	G	GAT	236.78	PASS	AB=1.000;AC=12;AF=0.857;AN=14;BaseQRankSum=0.118;DP=157;FS=0.000;HRun=0;HaplotypeScore=52.7584;MQ=18.83;MQ0=87;MQRankSum=-1.296;QD=4.64;ReadPosRankSum=-0.118;VQSLOD=2.0558;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	1/1:2,1:2:2.50:9,2,0	./.	./.	./.	./.	./.	./.	./.	1/1:7,1:2:6.02:85,6,0	./.	./.	./.	./.	0/1:4,0:2:0:0,0,0	0/1:11,0:6:8.18:29,0,8	./.	./.	./.	1/1:10,1:10:3.34:44,3,0	./.	./.	./.	./.	./.	1/1:4,1:3:6.02:91,6,0	./.	1/1:7,2:6:3.01:51,3,0
chr10	34053227	.	GAT	G	365.02	PASS	AC=10;AF=0.833;AN=12;BaseQRankSum=-0.296;DP=172;FS=0.000;HRun=0;HaplotypeScore=60.9540;MQ=19.10;MQ0=106;MQRankSum=-1.875;QD=8.90;ReadPosRankSum=0.099;VQSLOD=2.7878;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	1/1:2,1:2:3.01:36,3,0	./.	./.	./.	./.	./.	./.	./.	1/1:7,4:4:12.04:166,12,0	./.	./.	./.	./.	./.	0/0:6,1:5:6.01:0,6,60	./.	./.	./.	1/1:7,5:11:2.18:28,2,0	./.	./.	./.	./.	./.	1/1:3,2:3:9.03:129,9,0	./.	1/1:3,7:6:6.02:84,6,0
chr10	34057711	.	TCTCTCACA	T	4683.90	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=0.819;DP=657;FS=31.096;HRun=0;HaplotypeScore=150.4229;InbreedingCoeff=-0.2161;MQ=52.53;MQ0=31;MQRankSum=2.360;QD=9.29;ReadPosRankSum=-0.586;VQSLOD=2.4892;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:35:52.10:0,52,1224	1/1:10,0:10:3.82:299,4,0	1/1:7,0:1:2.04:6,2,0	0/0:10,0:2:5.97:0,6,65	0/1:28,0:28:22.19:22,0,247	0/0:29,0:29:18.50:0,19,263	0/1:24,0:22:25.09:286,0,25	0/1:21,0:19:22.95:607,0,23	0/1:15,0:15:99:246,0,113	0/1:35,0:32:99:545,0,141	0/1:22,0:17:5.24:211,0,5	0/1:26,0:25:29.69:30,0,194	0/0:26,0:25:0.44:0,0,1	1/1:4,18:20:5.10:138,5,0	0/1:21,0:20:15.86:351,0,16	1/1:27,0:27:4.72:40,5,0	0/1:27,0:25:37.63:38,0,96	0/1:24,0:22:99:400,0,104	0/1:19,0:14:9.24:196,0,9	1/1:29,0:29:5.93:80,6,0	1/1:31,0:28:7.47:55,7,0	0/0:19,0:18:0.90:0,1,44	0/1:19,0:18:25.54:26,0,127	0/0:31,0:28:23.49:0,23,383	0/1:16,0:16:41.32:41,0,55	0/1:31,0:28:99:485,0,395	0/1:24,0:24:7.62:20,0,8	1/1:25,1:25:12.95:563,13,0
chr10	34057713	.	TCTCACA	T	5869.78	PASS	AB=0.826;AC=35;AF=0.625;AN=56;BaseQRankSum=0.425;DP=662;FS=8.185;HRun=0;HaplotypeScore=137.5752;InbreedingCoeff=0.1433;MQ=52.91;MQ0=30;MQRankSum=2.588;QD=11.53;ReadPosRankSum=-0.181;VQSLOD=3.4180;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:35:34.15:0,34,975	1/1:10,0:10:24.04:356,24,0	1/1:8,0:1:2.04:6,2,0	0/0:11,0:3:8.98:0,9,110	0/1:29,0:29:60.38:60,0,77	0/0:28,0:28:11.68:0,12,79	1/1:24,0:22:4.89:328,5,0	1/1:26,0:24:26.43:792,26,0	0/1:14,0:14:36.90:293,0,37	0/1:8,25:31:0.60:625,0,1	1/1:23,0:18:27.46:342,27,0	0/1:25,0:24:36.91:37,0,71	0/0:4,23:25:0.11:0,0,0	1/1:22,0:20:8.98:99,9,0	1/1:21,1:21:13.11:560,13,0	1/1:4,21:25:2.14:54,2,0	0/1:11,0:25:21.62:100,0,22	0/1:24,0:22:60.78:353,0,61	1/1:6,0:13:29.87:292,30,0	1/1:3,26:29:6.01:80,6,0	1/1:33,0:30:14.92:134,15,0	0/0:3,16:18:1.21:0,1,19	0/1:7,0:18:32.02:32,0,41	0/0:31,0:28:20.05:0,20,152	0/1:17,0:17:17.20:17,0,48	0/1:13,19:30:92.79:535,0,93	1/1:1,22:23:1.32:70,1,0	1/1:25,1:25:36.34:705,36,0
chr10	34057715	.	TCACACA	T	3560.73	PASS	AB=1.000;AC=40;AF=0.714;AN=56;BaseQRankSum=0.603;DP=655;FS=2.091;HRun=0;HaplotypeScore=144.4173;InbreedingCoeff=0.3944;MQ=53.03;MQ0=29;MQRankSum=1.374;QD=6.68;ReadPosRankSum=1.041;VQSLOD=2.0870;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:34:51.65:0,52,1317	1/1:10,0:10:20.41:176,20,0	0/0:9,0:1:2.96:0,3,19	0/0:13,0:4:12.04:0,12,252	1/1:17,10:27:1.72:4,2,0	0/0:10,16:26:3.86:0,4,23	1/1:23,0:21:27.07:528,27,0	1/1:6,0:23:24.19:377,24,0	1/1:13,0:14:26.99:550,27,0	0/1:33,0:31:5.34:179,0,5	1/1:22,0:18:18.26:150,18,0	1/1:12,0:23:5.49:90,5,0	0/1:27,0:25:0.14:0,0,1	1/1:22,0:20:4.56:38,5,0	1/1:23,0:22:14.99:317,15,0	1/1:24,0:24:2.08:36,2,0	1/1:25,1:24:9.03:169,9,0	0/1:23,0:21:99:130,0,192	1/1:18,0:13:8.82:68,9,0	1/1:29,0:29:5.94:41,6,0	1/1:16,0:28:3.01:63,3,0	0/0:20,0:19:1.22:0,1,21	1/1:18,0:17:2.96:37,3,0	1/1:17,3:31:2.56:25,3,0	0/0:18,0:18:22.43:0,22,231	1/1:31,0:29:5.31:210,5,0	1/1:23,0:23:2.91:52,3,0	0/1:27,0:26:12.02:321,0,12
chr10	34060973	.	A	AT	1657.61	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-1.707;DP=544;FS=9.530;HRun=8;HaplotypeScore=65.3541;InbreedingCoeff=0.9846;MQ=75.22;MQ0=0;MQRankSum=-2.123;QD=27.63;ReadPosRankSum=1.007;VQSLOD=3.9194;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:59.91:0,60,701	0/0:10,0:10:24.01:0,24,219	0/0:12,0:12:17.86:0,18,152	0/0:11,0:11:22.77:0,23,217	0/0:37,0:37:99:0,102,924	0/0:31,0:31:75.02:0,75,686	0/0:12,0:12:24.01:0,24,219	0/0:26,0:26:59.64:0,60,548	0/0:14,0:14:39.02:0,39,357	0/0:21,0:21:63.03:0,63,574	0/0:18,0:18:14.57:0,15,305	1/1:0,21:21:57.17:658,57,0	0/0:20,0:20:45.01:0,45,412	0/0:21,0:21:57.03:0,57,522	0/0:20,0:20:60.02:0,60,544	0/0:7,0:7:18:0,18,160	0/0:25,0:25:66.01:0,66,598	0/0:17,0:17:42.01:0,42,384	0/0:13,0:13:33.01:0,33,302	0/0:20,0:20:53.97:0,54,484	0/0:12,0:12:36.02:0,36,329	0/0:10,0:10:24.01:0,24,220	1/1:1,19:20:51.15:589,51,0	1/1:2,17:19:48.14:554,48,0	0/0:20,0:20:53.99:0,54,488	0/0:30,0:30:84.03:0,84,763	0/0:20,0:20:57.02:0,57,517	0/0:25,0:25:54.03:0,54,494
chr10	34061004	.	A	AT	736	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-5.017;DP=549;FS=3.562;HRun=8;HaplotypeScore=81.3217;InbreedingCoeff=0.9621;MQ=71.18;MQ0=1;MQRankSum=-2.148;QD=25.38;ReadPosRankSum=0.844;VQSLOD=4.4097;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,25:29:72.21:831,72,0	0/0:7,0:7:18.01:0,18,165	0/0:14,0:14:13.50:0,14,167	0/0:19,0:18:21.69:0,22,317	0/0:36,0:36:99:0,99,896	0/0:26,0:26:69.03:0,69,632	0/0:14,0:14:42.02:0,42,384	0/0:35,0:35:78.03:0,78,710	0/0:18,0:18:45.02:0,45,412	0/0:21,0:21:57.02:0,57,522	0/0:22,0:22:60.03:0,60,549	0/0:18,0:18:48.03:0,48,439	0/0:18,0:18:45.02:0,45,412	0/0:15,0:15:41.80:0,42,378	0/0:19,0:19:54.03:0,54,494	0/0:8,0:8:21.01:0,21,192	0/0:27,0:27:69:0,69,626	0/0:15,0:15:45.02:0,45,412	0/0:17,0:17:45.01:0,45,408	0/0:22,0:22:63.01:0,63,571	0/0:11,0:11:30.02:0,30,275	0/0:13,0:13:36.02:0,36,329	0/0:22,0:22:66.04:0,66,604	0/0:21,0:21:29.23:0,29,418	0/0:18,0:18:48.02:0,48,439	0/0:29,0:29:84.02:0,84,758	0/0:15,0:14:39.01:0,39,357	0/0:16,0:16:39.02:0,39,357
chr10	34065210	.	CT	C	67.87	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.406;DP=474;FS=1.182;HRun=6;HaplotypeScore=77.4509;InbreedingCoeff=0.7733;MQ=58.74;MQ0=5;MQRankSum=-3.092;QD=6.79;ReadPosRankSum=-2.261;VQSLOD=-0.3688;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,7:8:17.04:158,17,0	0/0:10,0:10:22.88:0,23,286	0/0:9,0:7:14.41:0,14,172	0/0:16,0:11:17.34:0,17,259	0/0:36,0:35:76.37:0,76,929	0/0:17,0:17:35.60:0,36,414	0/0:14,0:12:26.07:0,26,313	0/0:29,0:29:48.32:0,48,584	0/0:16,0:16:37.28:0,37,474	0/0:20,0:19:46.75:0,47,637	0/0:18,0:18:38.96:0,39,479	0/0:14,0:14:27.34:0,27,347	0/0:21,0:20:34.98:0,35,455	0/0:12,0:11:24.05:0,24,293	0/0:16,0:16:31.85:0,32,438	0/0:19,0:19:47.26:0,47,498	0/0:23,0:19:24.46:0,24,512	0/0:12,0:12:28.51:0,29,325	0/0:21,0:20:43.65:0,44,487	0/0:31,0:31:73.93:0,74,1006	0/0:5,0:5:9.50:0,10,124	0/0:11,0:11:21.95:0,22,284	0/0:11,0:11:33.11:0,33,439	0/0:3,0:3:3.01:0,3,41	0/0:28,0:28:62.58:0,63,766	0/0:15,0:15:34.82:0,35,436	0/0:27,0:27:51.57:0,52,774	0/0:10,0:10:20.69:0,21,287
chr10	34065279	.	T	TTGAGCTAAATCTACCAC	67851.88	PASS	AB=0.854;AC=47;AF=0.839;AN=56;BaseQRankSum=-2.363;DP=452;FS=0.803;HRun=0;HaplotypeScore=162.2106;InbreedingCoeff=0.5489;MQ=34.78;MQ0=25;MQRankSum=-5.230;QD=163.89;ReadPosRankSum=1.891;VQSLOD=4.9732;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:14:36.12:0,36,1649	1/1:1,1:2:6.02:488,6,0	0/0:9,0:5:12.01:0,12,314	0/0:10,0:4:12.04:0,12,508	1/1:10,12:22:54.19:3761,54,0	1/1:6,8:13:36.12:2592,36,0	1/1:10,5:11:27.09:2078,27,0	0/1:25,0:17:99:1628,0,107	0/1:10,6:15:60.86:2387,0,61	1/1:13,8:22:66.23:4535,66,0	1/1:8,10:20:45.15:3274,45,0	1/1:7,9:16:43.03:3092,43,0	1/1:12,6:16:48.16:3054,48,0	1/1:12,8:18:45.15:3294,45,0	1/1:10,8:17:42.14:2973,42,0	1/1:15,12:27:78.25:5225,78,0	1/1:9,5:15:34.36:2538,34,0	0/1:8,2:10:99:1165,0,115	1/1:10,1:8:18.06:1127,18,0	1/1:9,13:24:57.20:4288,57,0	1/1:8,0:8:9.03:591,9,0	1/1:4,8:12:36.12:2721,36,0	1/1:4,6:9:24.08:1912,24,0	1/1:7,2:7:15.05:1181,15,0	1/1:6,9:15:45.15:3435,45,0	1/1:12,9:22:51.17:3602,51,0	1/1:14,6:22:54.19:3847,54,0	1/1:12,3:14:39.13:3064,39,0
chr10	34065755	.	GT	G	481.76	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.567;DP=664;FS=5.726;HRun=9;HaplotypeScore=71.4892;InbreedingCoeff=0.9975;MQ=72.86;MQ0=1;MQRankSum=-2.347;QD=18.53;ReadPosRankSum=1.661;VQSLOD=4.1756;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,25:26:63.03:577,63,0	0/0:13,0:13:39.12:0,39,450	0/0:20,0:19:31.28:0,31,307	0/0:11,1:12:33.06:0,33,352	0/0:32,0:32:87.26:0,87,1004	0/0:19,0:19:42.08:0,42,470	0/0:20,0:20:51.13:0,51,576	0/0:37,1:38:78.22:0,78,884	0/0:20,0:20:57.14:0,57,638	0/0:32,0:32:96.25:0,96,1087	0/0:12,0:12:30.09:0,30,345	0/0:32,0:32:93.27:0,93,1065	0/0:31,0:31:81.24:0,81,934	0/0:23,0:23:69.20:0,69,787	0/0:35,0:35:99:0,99,1127	0/0:21,0:20:60.18:0,60,693	0/0:20,0:20:45.13:0,45,519	0/0:9,0:9:27.06:0,27,300	0/0:21,0:21:51.14:0,51,579	0/0:28,0:28:69.19:0,69,782	0/0:23,0:23:66.16:0,66,734	0/0:13,0:13:33.10:0,33,378	0/0:26,0:26:72.21:0,72,830	0/0:24,0:24:66.20:0,66,762	0/0:29,0:29:81.22:0,81,919	0/0:28,0:28:78.20:0,78,875	0/0:37,0:37:99:0,108,1228	0/0:19,0:20:53.99:0,54,603
chr10	34066343	.	G	GT	871.50	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-4.578;DP=550;FS=3.241;HRun=9;HaplotypeScore=62.9142;InbreedingCoeff=0.9830;MQ=67.92;MQ0=9;MQRankSum=0.873;QD=18.16;ReadPosRankSum=-0.719;VQSLOD=3.7253;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:47.86:0,48,403	0/0:8,0:8:17.98:0,18,152	0/0:48,0:24:34.74:0,35,257	0/0:37,0:11:14.04:0,14,136	0/0:22,0:22:59.97:0,60,516	0/0:25,0:25:56.98:0,57,495	0/0:14,0:14:35.98:0,36,312	0/0:25,0:25:47.96:0,48,417	0/0:9,0:9:18:0,18,156	0/0:12,0:12:29.99:0,30,260	0/0:12,0:12:29.97:0,30,257	1/1:2,14:16:30.08:332,30,0	0/0:13,0:13:26.98:0,27,234	0/0:8,0:8:20.98:0,21,178	0/0:17,0:17:41.99:0,42,365	0/0:25,0:24:62.98:0,63,547	0/0:31,0:31:68.90:0,69,583	0/0:24,0:24:51.81:0,52,460	0/0:23,0:22:56.79:0,57,476	0/0:15,0:15:38.96:0,39,334	0/0:10,0:10:23.98:0,24,208	0/0:17,0:17:50.98:0,51,441	1/1:2,10:12:24.02:251,24,0	1/1:4,16:20:39.11:431,39,0	0/0:25,0:25:59.96:0,60,517	0/0:17,0:17:47.99:0,48,417	0/0:28,0:27:71.88:0,72,608	0/0:11,0:11:29.99:0,30,260
chr10	34068770	.	CT	C	9728.80	PASS	AB=0.974;AC=54;AF=0.964;AN=56;BaseQRankSum=-1.758;DP=719;FS=4.558;HRun=13;HaplotypeScore=104.1066;InbreedingCoeff=0.0175;MQ=71.32;MQ0=0;MQRankSum=-1.238;QD=13.53;ReadPosRankSum=4.577;VQSLOD=4.9408;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,29:35:59.41:437,59,0	1/1:1,17:20:51.79:362,52,0	0/1:13,0:12:11.44:11,0,98	0/1:17,1:16:30.50:31,0,39	1/1:7,17:25:20.26:289,20,0	1/1:5,13:18:32.73:241,33,0	1/1:7,20:28:7.76:345,8,0	1/1:10,22:35:37.15:407,37,0	1/1:3,21:27:60.50:418,60,0	1/1:10,18:28:24.40:343,24,0	1/1:6,16:22:41.64:302,42,0	1/1:13,33:47:70.57:628,71,0	1/1:4,23:29:57.61:405,58,0	1/1:3,16:20:46.73:334,47,0	1/1:7,18:26:49.73:356,50,0	1/1:4,26:30:71.54:525,72,0	1/1:6,23:30:67.63:487,68,0	1/1:1,13:14:9.61:233,10,0	1/1:6,20:27:31.99:391,32,0	1/1:6,25:32:38.36:433,38,0	1/1:9,20:30:52.70:378,53,0	1/1:4,24:28:62.57:459,63,0	1/1:7,12:19:26.61:197,27,0	1/1:4,16:20:42.22:307,42,0	1/1:4,21:25:41.43:417,41,0	1/1:11,21:33:35.35:412,35,0	1/1:3,15:20:33.76:230,34,0	1/1:2,18:20:47.72:350,48,0
chr10	34071897	.	T	TAA	569.26	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=-1.832;DP=609;FS=2.564;HRun=10;HaplotypeScore=84.5268;InbreedingCoeff=0.6103;MQ=76.15;MQ0=0;MQRankSum=-0.935;QD=10.35;ReadPosRankSum=-3.933;VQSLOD=0.9421;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,15:18:44.64:635,45,0	0/0:12,0:12:36.08:0,36,366	0/0:22,0:24:21.18:0,21,263	0/0:6,0:6:8.98:0,9,83	0/1:37,0:37:40.25:40,0,434	0/0:32,0:32:50.52:0,51,561	0/0:17,0:17:14.29:0,14,260	0/0:33,0:33:80.83:0,81,789	0/0:22,0:22:32.10:0,32,383	0/0:23,0:23:57.10:0,57,574	0/0:33,0:34:77.86:0,78,833	0/0:26,0:26:72.15:0,72,732	0/0:15,0:15:42.09:0,42,427	0/0:13,0:13:32.09:0,32,311	0/0:25,0:26:71.85:0,72,707	0/0:26,0:26:69.14:0,69,702	0/0:27,0:27:70.29:0,70,534	0/0:10,0:10:24.03:0,24,244	0/0:13,0:13:33.03:0,33,335	0/0:37,0:37:96.19:0,96,976	0/0:14,0:14:36.02:0,36,366	0/0:19,0:19:39.07:0,39,396	0/0:16,0:18:47.78:0,48,459	0/0:14,0:14:33.04:0,33,336	0/0:25,0:25:57.10:0,57,580	0/0:23,0:24:62.85:0,63,622	0/0:33,0:33:96.22:0,96,976	0/0:11,0:11:33.07:0,33,336
chr10	34072774	.	A	ATT	5959.83	PASS	AB=0.742;AC=51;AF=0.911;AN=56;BaseQRankSum=-2.226;DP=635;FS=0.756;HRun=11;HaplotypeScore=100.5094;InbreedingCoeff=0.3397;MQ=67.92;MQ0=1;MQRankSum=-4.572;QD=9.55;ReadPosRankSum=3.849;VQSLOD=2.7135;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,21:29:34.20:776,34,0	1/1:2,0:7:17.82:71,18,0	0/0:10,0:10:14.80:0,15,138	0/1:15,0:13:6.46:6,0,171	1/1:2,0:26:55.72:210,56,0	1/1:2,2:22:39.37:209,39,0	0/1:3,0:14:8.63:40,0,9	1/1:5,1:26:51.42:233,51,0	1/1:4,1:21:40.44:172,40,0	1/1:4,0:24:50.98:190,51,0	1/1:5,2:27:32.06:224,32,0	1/1:1,22:26:41.65:859,42,0	1/1:4,0:26:18.70:125,19,0	1/1:4,0:17:5.98:81,6,0	1/1:6,0:21:7.96:83,8,0	1/1:7,1:38:63.93:260,64,0	1/1:5,0:38:70.76:242,71,0	1/1:5,0:18:5.35:70,5,0	0/1:10,0:20:27.41:55,0,27	1/1:6,0:28:44.67:154,45,0	1/1:0,0:10:13.72:46,14,0	1/1:2,1:17:32.83:145,33,0	1/1:7,16:23:39.08:564,39,0	1/1:0,13:13:27.09:391,27,0	1/1:2,0:30:47.41:163,47,0	1/1:5,0:30:61.29:213,61,0	1/1:6,0:36:59.76:206,60,0	1/1:1,0:21:49.91:171,50,0
chr10	34075308	.	GA	G	985.24	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=7.840;DP=589;FS=0.497;HRun=11;HaplotypeScore=62.3249;InbreedingCoeff=0.6792;MQ=75.34;MQ0=4;MQRankSum=-0.883;QD=12.47;ReadPosRankSum=1.106;VQSLOD=3.4236;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:93.21:0,93,977	0/0:4,0:4:12.03:0,12,128	0/0:31,0:23:22.74:0,23,287	0/1:21,0:13:17.32:17,0,126	0/0:12,0:12:27.04:0,27,268	0/0:24,3:29:0.91:0,1,585	0/0:22,0:22:54.13:0,54,569	0/0:40,3:43:34.28:0,34,943	0/0:18,0:18:51.13:0,51,544	0/0:15,0:15:39.08:0,39,399	0/0:15,0:15:33.08:0,33,346	1/1:6,22:28:56.90:468,57,0	0/0:26,0:26:66.09:0,66,670	0/0:14,0:14:27.04:0,27,277	0/0:20,1:21:32.49:0,32,545	0/0:25,0:25:41.57:0,42,611	0/0:17,0:20:53.75:0,54,516	0/0:28,2:31:36.02:0,36,758	0/0:22,0:22:46.89:0,47,467	0/0:16,0:20:53.58:0,54,496	0/0:20,0:20:51.13:0,51,544	0/0:12,1:13:14.45:0,14,352	1/1:3,2:5:5.95:49,6,0	1/1:0,25:25:71.91:591,72,0	0/0:8,0:8:24.05:0,24,248	0/0:20,2:22:1.83:0,2,423	0/0:23,0:28:65.57:0,66,637	0/0:15,0:15:33.02:0,33,332
chr10	34077930	.	G	GTG	16168.65	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-3.481;DP=686;FS=0.967;HRun=0;HaplotypeScore=124.8668;InbreedingCoeff=0.9016;MQ=69.68;MQ0=2;MQRankSum=-2.087;QD=25.66;ReadPosRankSum=3.030;VQSLOD=6.0898;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:32,0:30:34.56:312,35,0	1/1:5,0:5:6.02:93,6,0	0/0:29,0:23:17.62:0,18,230	0/0:26,0:20:7.56:0,8,98	1/1:23,0:23:46.13:565,46,0	1/1:29,0:29:63.09:791,63,0	1/1:36,0:36:77.93:963,78,0	1/1:32,0:32:31.93:367,32,0	1/1:27,0:27:65.61:786,66,0	1/1:19,3:23:57.13:742,57,0	1/1:19,0:19:36.12:537,36,0	1/1:22,0:21:41.11:216,41,0	1/1:17,0:17:50.95:610,51,0	1/1:16,0:16:45.14:664,45,0	1/1:26,0:26:71.93:1006,72,0	1/1:30,0:30:43.07:625,43,0	1/1:19,0:19:48.06:617,48,0	1/1:13,2:16:38.88:529,39,0	1/1:27,0:27:51.08:621,51,0	1/1:32,0:32:87.19:1188,87,0	1/1:26,0:26:51.08:661,51,0	1/1:22,0:22:32.73:455,33,0	1/1:26,0:26:63.99:284,64,0	1/1:25,0:25:54.60:216,55,0	1/1:34,0:34:86.79:1110,87,0	1/1:34,0:34:86.81:1009,87,0	1/1:19,0:19:56.41:679,56,0	1/1:13,0:13:38.88:522,39,0
chr10	34077938	.	G	GTG	16126.07	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-3.463;DP=676;FS=2.071;HRun=0;HaplotypeScore=127.8529;InbreedingCoeff=0.9016;MQ=70.09;MQ0=4;MQRankSum=-2.540;QD=26.01;ReadPosRankSum=2.994;VQSLOD=6.1375;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:28:33.48:309,33,0	1/1:4,0:4:6.02:93,6,0	0/0:29,0:21:17.62:0,18,230	0/0:26,0:21:7.56:0,8,98	1/1:25,0:25:46.13:565,46,0	1/1:25,0:25:63.09:791,63,0	1/1:34,0:34:77.90:961,78,0	1/1:26,0:26:31.93:367,32,0	1/1:26,0:26:65.61:786,66,0	1/1:22,0:22:60.14:780,60,0	1/1:18,0:18:36.12:537,36,0	1/1:19,0:18:41.11:216,41,0	1/1:20,0:20:50.95:610,51,0	1/1:16,0:16:42.13:627,42,0	1/1:29,0:29:71.93:1006,72,0	1/1:26,0:26:43.07:625,43,0	1/1:20,0:20:48.06:617,48,0	1/1:17,0:17:36.38:510,36,0	1/1:27,0:26:51.53:602,52,0	1/1:34,0:34:87.19:1188,87,0	1/1:20,4:25:51.08:661,51,0	1/1:23,0:23:32.73:455,33,0	1/1:27,0:27:63.99:284,64,0	1/1:25,0:24:54.60:216,55,0	1/1:34,0:34:86.79:1110,87,0	1/1:33,0:33:86.81:1009,87,0	1/1:21,0:21:56.41:679,56,0	1/1:14,0:14:38.88:522,39,0
chr10	34077940	.	G	GT	11416.61	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=2.738;DP=669;FS=27.580;HRun=1;HaplotypeScore=130.1085;InbreedingCoeff=0.9327;MQ=69.76;MQ0=4;MQRankSum=-0.642;QD=18.56;ReadPosRankSum=8.672;VQSLOD=3.0910;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,2:31:33:217,33,0	1/1:3,2:5:5.13:55,5,0	0/0:24,1:18:33.76:0,34,387	0/0:28,0:22:43.26:0,43,349	1/1:17,7:25:17.28:412,17,0	1/1:11,11:24:62.11:558,62,0	1/1:15,16:31:70.43:661,70,0	1/1:20,4:25:24.13:252,24,0	1/1:11,14:25:60.89:588,61,0	1/1:11,10:22:60.32:534,60,0	1/1:1,16:18:34.66:346,35,0	1/1:19,0:18:47.99:295,48,0	1/1:13,7:21:48.20:404,48,0	1/1:5,12:18:41.15:386,41,0	1/1:10,17:30:65.63:626,66,0	1/1:4,13:26:39.50:360,40,0	1/1:10,10:20:41.69:404,42,0	1/1:6,11:17:31.53:325,32,0	1/1:15,9:25:53.24:471,53,0	1/1:13,19:35:82.31:757,82,0	1/1:12,11:24:48.21:437,48,0	1/1:10,9:21:32.95:291,33,0	1/1:26,1:27:74.26:434,74,0	1/1:23,1:23:66.11:367,66,0	1/1:13,17:33:81.12:749,81,0	1/1:4,11:31:77.58:717,78,0	1/1:10,10:21:22.81:416,23,0	1/1:3,11:14:37.62:354,38,0
chr10	34077941	.	G	GT	5135.44	PASS	AB=0.729;AC=34;AF=0.607;AN=56;BaseQRankSum=-0.783;DP=658;FS=4.035;HRun=0;HaplotypeScore=152.6080;InbreedingCoeff=0.2359;MQ=69.07;MQ0=4;MQRankSum=-0.281;QD=10.13;ReadPosRankSum=9.367;VQSLOD=4.4576;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,1:27:11.60:0,12,136	0/1:3,2:5:5.11:36,0,5	0/0:25,0:17:41.52:0,42,441	0/0:27,0:21:44.61:0,45,405	0/1:18,6:24:67.24:154,0,67	1/1:13,11:24:17.14:253,17,0	1/1:14,15:29:10.68:309,11,0	0/1:21,4:25:70.87:91,0,71	0/1:13,12:25:28.17:222,0,28	1/1:12,10:22:34.82:299,35,0	1/1:7,11:18:15.96:218,16,0	0/0:19,0:18:39.81:0,40,235	0/1:14,7:21:9.61:152,0,10	1/1:7,12:19:28.82:272,29,0	1/1:15,17:32:17.85:413,18,0	1/1:11,12:23:1.03:213,1,0	0/1:9,10:19:13.18:204,0,13	0/1:7,10:17:8.34:184,0,8	0/1:20,7:26:42.99:162,0,43	1/1:16,19:35:56.31:465,56,0	1/1:13,11:24:13.51:240,14,0	1/1:11,9:20:27.52:189,28,0	0/0:27,0:27:74.97:0,75,411	0/0:24,0:23:66.64:0,67,370	1/1:17,15:33:38.60:399,39,0	0/1:19,11:30:30.08:273,0,30	0/1:11,10:21:46.62:195,0,47	1/1:4,10:14:13.61:190,14,0
chr10	34080655	.	G	GA	5335.34	PASS	AB=0.703;AC=45;AF=0.804;AN=56;BaseQRankSum=-3.598;DP=619;FS=9.076;HRun=14;HaplotypeScore=78.1271;InbreedingCoeff=-0.0593;MQ=54.77;MQ0=19;MQRankSum=0.418;QD=9.36;ReadPosRankSum=0.881;VQSLOD=3.6857;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:8,20:29:3.90:286,0,4	1/1:2,8:10:18:158,18,0	0/0:49,0:4:2.94:0,3,19	0/1:34,0:7:3.86:4,0,22	1/1:10,18:31:16.05:310,16,0	1/1:6,8:14:30.20:248,30,0	0/1:13,6:18:32.85:204,0,33	1/1:11,16:28:7.39:325,7,0	1/1:3,14:19:29.68:239,30,0	1/1:13,14:29:37.82:336,38,0	1/1:9,16:25:9.14:299,9,0	1/1:12,1:17:11.86:112,12,0	1/1:6,12:19:7.47:169,7,0	1/1:3,8:10:2.94:26,3,0	1/1:8,16:24:10.91:286,11,0	0/1:7,17:24:3.56:295,0,4	1/1:7,17:24:8.48:338,8,0	0/1:12,14:26:20.91:165,0,21	1/1:15,13:26:14.95:243,15,0	1/1:12,15:27:28.98:351,29,0	0/1:6,3:8:21.32:69,0,21	1/1:1,8:9:17.95:151,18,0	1/1:9,1:22:7.57:43,8,0	1/1:6,0:7:3.44:21,3,0	1/1:6,16:22:21.77:264,22,0	0/1:8,7:17:13.24:148,0,13	0/1:6,12:20:54.01:92,0,54	0/1:12,8:20:8.43:155,0,8
chr10	34081198	.	A	AT	14357.54	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-12.050;DP=614;FS=1.404;HRun=8;HaplotypeScore=52.5326;InbreedingCoeff=0.9554;MQ=74.56;MQ0=0;MQRankSum=-2.383;QD=28.60;ReadPosRankSum=1.159;VQSLOD=5.2034;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:68.68:0,69,594	1/1:1,8:9:23.99:259,24,0	0/0:10,0:10:2.22:0,2,96	0/0:15,0:15:26.96:0,27,228	1/1:4,23:27:63.15:712,63,0	1/1:2,24:25:69.21:796,69,0	1/1:4,19:23:51.15:589,51,0	1/1:3,36:39:99:1199,108,0	1/1:0,18:18:48.14:554,48,0	1/1:6,26:32:78.22:891,78,0	1/1:4,23:27:60.14:678,60,0	0/0:25,0:25:60.03:0,60,549	1/1:0,14:14:42.12:485,42,0	1/1:1,22:23:66.20:762,66,0	1/1:3,25:28:63.19:727,63,0	1/1:2,19:21:48.14:554,48,0	1/1:1,22:23:57.10:658,57,0	1/1:4,15:19:51.10:554,51,0	1/1:6,22:28:62.53:715,63,0	1/1:1,19:20:57.06:626,57,0	1/1:3,24:27:60.17:684,60,0	1/1:1,15:16:45.09:505,45,0	0/0:17,0:17:45.01:0,45,407	0/0:18,0:18:51.01:0,51,462	1/1:4,15:19:45.13:520,45,0	1/1:2,26:28:78.22:890,78,0	1/1:4,26:30:72.21:828,72,0	1/1:0,5:5:15.04:173,15,0
chr10	34081353	.	T	TTTTC	3870.20	PASS	AB=0.981;AC=8;AF=0.143;AN=56;BaseQRankSum=-9.420;DP=663;FS=0.507;HRun=0;HaplotypeScore=169.5327;InbreedingCoeff=0.6984;MQ=66.60;MQ0=1;MQRankSum=-1.174;QD=30.24;ReadPosRankSum=2.294;VQSLOD=3.7327;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:63.63:0,64,1422	0/0:9,0:9:23.41:0,23,149	0/1:15,0:13:18.32:18,0,37	0/0:8,0:8:9.03:0,9,136	0/0:20,0:20:40.17:0,40,271	0/0:17,0:17:23.29:0,23,136	0/0:27,0:27:52.67:0,53,316	0/0:35,0:34:41.56:0,42,260	0/0:24,0:24:46.56:0,47,273	0/0:23,0:23:44.05:0,44,304	0/0:25,0:25:55.42:0,55,327	1/1:11,22:33:57.67:1364,58,0	0/0:14,0:14:40.80:0,41,241	0/1:24,1:25:14.15:14,0,255	0/0:29,0:29:55.51:0,56,324	0/0:23,0:23:52.47:0,52,296	0/0:30,0:30:55.31:0,55,327	0/0:32,0:32:32.96:0,33,281	0/0:30,0:30:53.40:0,53,353	0/0:29,0:29:55.25:0,55,322	0/0:10,0:10:26.32:0,26,168	0/0:17,0:17:35.01:0,35,204	1/1:4,12:16:20.07:586,20,0	1/1:11,27:39:81.24:1888,81,0	0/0:18,0:18:43.90:0,44,258	0/0:21,0:21:49.91:0,50,313	0/0:38,0:38:87.39:0,87,517	0/0:22,0:22:37.73:0,38,214
chr10	34081373	.	C	CT	14609.05	PASS	AB=1.000;AC=47;AF=0.839;AN=56;BaseQRankSum=-3.529;DP=709;FS=1.412;HRun=8;HaplotypeScore=94.6835;InbreedingCoeff=0.5670;MQ=61.34;MQ0=1;MQRankSum=1.918;QD=23.34;ReadPosRankSum=5.910;VQSLOD=4.7426;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,109,1083	1/1:2,9:11:27.08:312,27,0	0/0:24,0:18:6:0,6,237	0/0:16,0:14:28.50:0,29,244	1/1:9,14:24:22.42:412,22,0	1/1:2,18:20:45.13:520,45,0	1/1:3,27:30:66.20:762,66,0	1/1:7,27:33:78.21:879,78,0	1/1:2,25:27:63.19:727,63,0	1/1:7,15:22:23.63:511,24,0	1/1:2,23:25:66.15:744,66,0	0/1:35,0:35:80.87:81,0,222	1/1:1,17:19:51.15:589,51,0	1/1:2,32:34:89.63:1012,90,0	1/1:1,29:30:78.23:901,78,0	1/1:1,25:26:44.77:769,45,0	1/1:4,21:25:60.18:688,60,0	1/1:4,25:30:73.60:815,74,0	1/1:13,18:31:51.10:564,51,0	1/1:3,24:27:66.20:761,66,0	1/1:2,9:11:27.08:312,27,0	1/1:1,14:15:39.12:450,39,0	0/1:16,0:16:29.13:42,0,29	0/1:39,0:39:99:129,0,110	1/1:3,15:18:45.13:520,45,0	1/1:3,19:22:57.17:658,57,0	1/1:6,34:40:87.26:1003,87,0	1/1:2,13:15:39.12:450,39,0
chr10	34085077	.	C	CTT	2733.29	PASS	AB=0.659;AC=33;AF=0.589;AN=56;BaseQRankSum=1.037;DP=570;FS=2.534;HRun=14;HaplotypeScore=87.7620;InbreedingCoeff=0.0088;MQ=76.99;MQ0=2;MQRankSum=-0.397;QD=5.62;ReadPosRankSum=-1.847;VQSLOD=0.1208;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:13,1:36:4.64:98,5,0	0/1:1,0:3:3.07:3,0,20	0/0:22,0:20:9.58:0,10,85	0/0:21,0:17:10.91:0,11,91	1/1:14,11:35:16.22:402,16,0	1/1:8,13:26:27.30:255,27,0	1/1:8,6:15:13.80:131,14,0	0/1:22,2:30:9.73:207,0,10	1/1:2,10:13:27.04:317,27,0	1/1:9,0:28:9.86:127,10,0	0/1:5,0:20:9.65:38,0,10	0/1:11,1:14:44.38:44,0,69	0/1:10,0:22:27.43:27,0,52	0/0:7,0:12:2.83:0,3,67	1/1:6,0:18:7.59:47,8,0	0/1:6,1:24:4.37:91,0,4	0/1:9,11:23:19:187,0,19	0/1:9,1:19:19.03:73,0,19	1/1:7,1:22:29.73:159,30,0	0/1:10,0:20:29.13:29,0,63	0/1:3,0:8:10.24:27,0,10	1/1:6,2:16:24.41:174,24,0	0/0:19,0:19:12.82:0,13,165	0/0:8,0:8:6.64:0,7,92	0/1:8,1:20:1.90:86,0,2	0/1:11,4:29:31.02:223,0,31	0/1:8,0:22:26.90:37,0,27	1/1:6,2:21:2.90:121,3,0
chr10	34085385	.	CCGCTTTGCAAATT	C	5030.16	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=10.613;DP=671;FS=1.240;HRun=0;HaplotypeScore=238.7273;InbreedingCoeff=0.9975;MQ=79.80;MQ0=0;MQRankSum=-10.879;QD=75.08;ReadPosRankSum=2.825;VQSLOD=4.2591;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,108,6333	0/0:10,0:10:24.07:0,24,1394	0/0:20,0:19:54.19:0,54,2951	0/0:20,0:19:47.95:0,48,2141	0/0:24,0:24:66.21:0,66,3716	0/0:19,0:19:54.19:0,54,3424	0/0:25,0:25:63.19:0,63,3576	0/0:35,0:35:90.30:0,90,5025	0/0:13,0:13:33.11:0,33,1975	0/0:26,0:26:75.25:0,75,4456	0/0:25,0:25:75.26:0,75,4723	1/1:9,19:28:48.16:1879,48,0	0/0:29,0:29:87.28:0,87,5203	0/0:26,0:26:69.22:0,69,4111	0/0:34,0:34:99:0,99,6054	0/0:20,0:20:54.17:0,54,3197	0/0:28,0:28:84.29:0,84,5102	0/0:26,0:26:69.24:0,69,4220	0/0:25,0:25:63.22:0,63,3366	0/0:15,0:15:33.11:0,33,2090	0/0:34,0:34:96.31:0,96,5599	0/0:26,0:26:75.26:0,75,4467	1/1:3,22:25:60.21:2329,60,0	1/1:3,11:14:21.07:822,21,0	0/0:30,0:30:90.31:0,90,5538	0/0:22,0:22:63.22:0,63,3871	0/0:21,0:21:57.20:0,57,3132	0/0:13,0:13:33.11:0,33,2149
chr10	34087693	.	T	TAGTA	41742.94	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-14.680;DP=798;FS=0.000;HRun=0;HaplotypeScore=109.1368;InbreedingCoeff=0.9756;MQ=88.79;MQ0=1;MQRankSum=-9.438;QD=63.44;ReadPosRankSum=2.914;VQSLOD=6.8829;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,21:25:60.21:1599,60,0	1/1:0,7:9:24.08:632,24,0	0/0:32,0:32:84.23:0,84,1482	0/0:33,0:33:78.13:0,78,1356	1/1:4,27:32:75.17:1878,75,0	1/1:4,23:29:63.22:1680,63,0	1/1:5,28:34:81.28:2158,81,0	1/1:10,26:42:99:2791,117,0	1/1:5,24:30:63.22:1675,63,0	1/1:8,28:37:93.29:2377,93,0	1/1:1,15:20:48.12:1195,48,0	0/0:31,0:31:90.26:0,90,1584	1/1:4,19:25:57.20:1509,57,0	1/1:5,21:25:57.20:1519,57,0	1/1:4,39:46:99:3034,114,0	1/1:5,33:40:96.33:2558,96,0	1/1:4,26:30:69.24:1839,69,0	1/1:6,14:21:43.61:1196,44,0	1/1:4,20:24:72.25:1862,72,0	1/1:4,19:25:66.15:1634,66,0	1/1:5,21:28:54.19:1439,54,0	1/1:1,22:24:60.21:1598,60,0	0/0:19,0:19:54.19:0,54,1008	0/0:25,0:25:72.20:0,72,1308	1/1:2,21:23:63.22:1679,63,0	1/1:5,29:36:99:2552,102,0	1/1:5,39:45:99:3178,120,0	1/1:2,4:6:6.02:160,6,0
chr10	34088520	.	C	CGG	9948.43	PASS	AC=44;AF=0.815;AN=54;BaseQRankSum=15.328;DP=467;FS=0.379;HRun=0;HaplotypeScore=192.1174;InbreedingCoeff=0.9806;MQ=70.86;MQ0=1;MQRankSum=-15.608;QD=30.80;ReadPosRankSum=5.315;VQSLOD=6.0334;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,14:15:36.80:375,37,0	1/1:0,4:4:9.03:104,9,0	0/0:24,0:22:60.64:0,61,903	0/0:38,0:34:90.23:0,90,1286	1/1:1,8:9:21.51:247,22,0	1/1:1,12:13:36.57:426,37,0	1/1:0,16:16:45.58:508,46,0	1/1:0,13:11:32.89:382,33,0	1/1:0,16:16:45.13:522,45,0	1/1:0,10:12:34.62:373,35,0	1/1:0,9:9:21.93:219,22,0	0/0:28,0:28:84.27:0,84,1342	1/1:1,19:20:57.16:681,57,0	1/1:1,18:20:56.99:582,57,0	1/1:2,20:21:63.16:722,63,0	1/1:1,22:23:69.10:750,69,0	1/1:1,14:15:36.58:422,37,0	1/1:0,5:5:15.05:207,15,0	1/1:0,9:9:27.08:324,27,0	1/1:1,15:16:39.51:423,40,0	1/1:0,11:11:30.08:335,30,0	1/1:1,15:16:40.45:426,40,0	0/0:21,0:21:60.20:0,60,979	0/0:33,0:33:99:0,99,1581	1/1:0,17:17:48.60:537,49,0	1/1:0,18:18:54.14:609,54,0	1/1:1,21:23:66.03:774,66,0	./.
chr10	34088521	.	TC	T	6310.31	PASS	AC=44;AF=0.815;AN=54;BaseQRankSum=15.602;DP=465;FS=1.227;HRun=2;HaplotypeScore=197.1278;InbreedingCoeff=0.9787;MQ=69.97;MQ0=1;MQRankSum=-16.041;QD=19.72;ReadPosRankSum=6.667;VQSLOD=4.5291;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,14:15:29.76:216,30,0	1/1:0,4:4:8.96:69,9,0	0/0:25,0:23:61.84:0,62,837	0/0:37,0:33:90.18:0,90,1209	1/1:0,8:8:17.56:115,18,0	1/1:1,12:13:32.82:247,33,0	1/1:0,16:16:41.76:312,42,0	1/1:1,13:11:32.31:248,32,0	1/1:0,16:16:44.64:327,45,0	1/1:2,10:12:29.51:222,30,0	1/1:0,9:9:20.84:151,21,0	0/0:29,0:29:87.28:0,87,1365	1/1:1,19:20:56.60:421,57,0	1/1:2,17:20:56.24:395,56,0	1/1:1,20:20:59.65:443,60,0	1/1:0,22:22:65.60:489,66,0	1/1:1,14:15:35.79:267,36,0	1/1:0,5:5:14.97:123,15,0	1/1:0,9:9:26.95:219,27,0	1/1:0,15:15:38.79:292,39,0	1/1:0,11:11:29.81:220,30,0	1/1:2,15:17:35.81:270,36,0	0/0:21,0:21:63.21:0,63,983	0/0:33,0:33:99:0,99,1507	1/1:0,17:17:47.74:360,48,0	1/1:0,18:18:53.78:417,54,0	1/1:2,21:23:66.31:486,66,0	./.
chr10	34088523	.	ATTCCT	A	13877.58	PASS	AC=44;AF=0.815;AN=54;BaseQRankSum=15.703;DP=466;FS=2.771;HRun=0;HaplotypeScore=201.4293;InbreedingCoeff=0.9808;MQ=67.94;MQ0=1;MQRankSum=-15.365;QD=42.44;ReadPosRankSum=5.166;VQSLOD=4.5828;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,14:16:39:533,39,0	1/1:0,4:4:9.03:145,9,0	0/0:22,0:21:60.11:0,60,1538	0/0:35,0:31:87.24:0,87,2335	1/1:2,6:8:21.02:268,21,0	1/1:0,12:12:36.04:549,36,0	1/1:0,16:16:45.10:690,45,0	1/1:0,16:13:36.11:581,36,0	1/1:0,16:16:48.10:737,48,0	1/1:2,10:12:30.10:484,30,0	1/1:0,9:9:23.67:336,24,0	0/0:30,0:30:90.31:0,90,2914	1/1:0,19:19:54.18:851,54,0	1/1:3,17:20:57.18:864,57,0	1/1:2,20:21:61.12:917,61,0	1/1:1,22:23:67.47:1058,67,0	1/1:0,14:14:39.08:600,39,0	1/1:0,5:5:15.05:261,15,0	1/1:0,9:9:27.09:462,27,0	1/1:0,17:17:42.07:634,42,0	1/1:1,11:12:30.10:477,30,0	1/1:2,15:17:44.80:630,45,0	0/0:21,0:21:63.18:0,63,1892	0/0:30,0:30:90.31:0,90,2881	1/1:1,17:18:54.08:808,54,0	1/1:1,18:19:56.22:889,56,0	1/1:0,23:23:69.23:1105,69,0	./.
chr10	34088527	.	C	CGG	2499.73	PASS	AC=44;AF=0.815;AN=54;BaseQRankSum=15.316;DP=495;FS=1.246;HRun=0;HaplotypeScore=224.8460;InbreedingCoeff=0.9250;MQ=65.22;MQ0=1;MQRankSum=-14.827;QD=7.10;ReadPosRankSum=4.499;VQSLOD=3.1417;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,2:17:28.67:178,29,0	1/1:4,0:4:5.19:15,5,0	0/0:23,0:21:51.15:0,51,781	0/0:39,0:34:96.02:0,96,1393	1/1:6,0:6:5.76:44,6,0	1/1:15,1:16:25.99:136,26,0	1/1:18,0:18:26.98:111,27,0	1/1:16,0:13:24.04:81,24,0	1/1:18,0:18:37.35:179,37,0	1/1:13,1:14:13.47:97,13,0	1/1:11,0:11:11.58:78,12,0	0/0:32,0:32:93.30:0,93,1491	1/1:21,0:21:31.89:91,32,0	1/1:19,1:21:28.44:82,28,0	1/1:23,2:24:44.45:250,44,0	1/1:24,1:25:42.06:158,42,0	1/1:14,0:14:25.01:104,25,0	1/1:6,0:6:13.18:55,13,0	1/1:9,0:9:20.37:68,20,0	1/1:17,0:17:19.12:116,19,0	1/1:12,0:12:18.54:70,19,0	1/1:18,0:18:28.45:150,28,0	0/0:20,0:20:54.18:0,54,869	0/0:29,0:29:87.28:0,87,1392	1/1:19,0:19:33.49:161,33,0	1/1:18,1:19:41.99:228,42,0	1/1:26,0:26:45.43:227,45,0	./.
chr10	34088528	.	T	TA	10719.67	PASS	AC=44;AF=0.815;AN=54;BaseQRankSum=15.152;DP=586;FS=1.637;HRun=0;HaplotypeScore=227.2586;InbreedingCoeff=0.9871;MQ=61.32;MQ0=1;MQRankSum=-14.974;QD=24.25;ReadPosRankSum=1.979;VQSLOD=4.5210;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:20,2:22:51.01:475,51,0	1/1:5,0:5:12:108,12,0	0/0:23,0:21:57.15:0,57,766	0/0:40,0:34:94.81:0,95,1242	1/1:7,0:7:17.98:149,18,0	1/1:17,1:18:51.02:486,51,0	1/1:23,0:23:59.95:517,60,0	1/1:25,0:21:59.94:578,60,0	1/1:21,0:21:63.05:616,63,0	1/1:20,1:20:47.90:468,48,0	1/1:16,0:16:36:338,36,0	0/0:32,0:32:96.31:0,96,1324	1/1:24,0:24:59.76:531,60,0	1/1:23,1:24:61.66:541,62,0	1/1:29,2:30:89.92:848,90,0	1/1:33,1:34:95.97:883,96,0	1/1:15,0:15:41.98:366,42,0	1/1:6,0:6:15.03:152,15,0	1/1:14,0:14:36.08:369,36,0	1/1:19,0:19:44.98:393,45,0	1/1:17,0:17:38.97:333,39,0	1/1:23,0:23:53.99:486,54,0	0/0:20,0:20:60.15:0,60,785	0/0:29,0:29:84.27:0,84,1157	1/1:23,0:23:66.02:617,66,0	1/1:25,1:26:75.10:736,75,0	1/1:28,0:28:80.40:731,80,0	./.
chr10	34089866	.	AT	A	945.74	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-3.731;DP=760;FS=10.174;HRun=7;HaplotypeScore=173.3387;InbreedingCoeff=0.9919;MQ=75.85;MQ0=0;MQRankSum=0.160;QD=24.89;ReadPosRankSum=1.204;VQSLOD=1.6834;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,36:38:99:1041,102,0	0/0:7,0:7:21.07:0,21,261	0/0:21,0:21:51.04:0,51,591	0/0:15,0:15:21.27:0,21,335	0/0:33,0:33:93.21:0,93,1096	0/0:26,0:26:78.19:0,78,931	0/0:29,0:29:75.15:0,75,888	0/0:32,0:32:84.22:0,84,998	0/0:22,0:22:60.19:0,60,747	0/0:37,0:37:99:0,99,1202	0/0:17,0:17:45.13:0,45,549	0/0:39,0:39:99:0,111,1385	0/0:34,0:34:96.28:0,96,1182	0/0:17,0:17:48.13:0,48,583	0/0:41,0:41:99:0,114,1389	0/0:35,0:35:99:0,102,1259	0/0:40,0:41:99:0,102,1248	0/0:16,0:16:45.14:0,45,552	0/0:25,0:25:57.11:0,57,666	0/0:23,0:23:63.19:0,63,774	0/0:22,0:22:60.19:0,60,747	0/0:31,0:31:90.24:0,90,1091	0/0:21,0:21:54.15:0,54,656	0/0:34,0:34:96.26:0,96,1188	0/0:19,0:19:33.71:0,34,482	0/0:32,0:32:87.27:0,87,1070	0/0:32,0:31:67.69:0,68,1031	0/0:21,0:21:63.15:0,63,746
chr10	34090058	.	TAC	T	15254.24	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-5.232;DP=722;FS=2.862;HRun=0;HaplotypeScore=110.3970;InbreedingCoeff=0.9855;MQ=62.20;MQ0=11;MQRankSum=2.639;QD=23.18;ReadPosRankSum=4.738;VQSLOD=5.0489;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,38:48:53.79:1113,54,0	1/1:1,9:10:18.06:217,18,0	0/0:27,1:14:20.40:0,20,239	0/0:35,0:22:35.96:0,36,490	1/1:6,19:26:50.83:576,51,0	1/1:2,12:15:27.03:308,27,0	1/1:8,20:28:36.07:418,36,0	1/1:11,18:30:35.97:581,36,0	1/1:7,18:25:45.75:559,46,0	1/1:7,19:26:50.97:582,51,0	1/1:3,17:20:45.14:543,45,0	1/1:7,22:29:63.11:727,63,0	1/1:5,15:20:36.11:434,36,0	1/1:9,18:27:50.90:560,51,0	1/1:4,26:30:72.18:852,72,0	1/1:6,26:31:72.22:866,72,0	1/1:6,23:29:52.90:649,53,0	1/1:4,12:16:30.09:362,30,0	1/1:9,6:14:18.06:217,18,0	1/1:4,10:15:32.89:359,33,0	1/1:9,43:55:99:1331,114,0	1/1:1,17:17:39.12:471,39,0	1/1:1,10:11:27.08:326,27,0	1/1:13,35:46:88.15:1052,88,0	1/1:6,14:20:39.12:470,39,0	1/1:7,21:29:66.01:750,66,0	1/1:5,17:22:57.17:677,57,0	1/1:3,7:10:21.06:253,21,0
chr10	34090142	.	ATC	A	3537.14	PASS	AB=0.832;AC=39;AF=0.780;AN=50;BaseQRankSum=-1.259;DP=595;FS=55.773;HRun=0;HaplotypeScore=100.2818;InbreedingCoeff=0.4647;MQ=51.36;MQ0=27;MQRankSum=1.733;QD=8.15;ReadPosRankSum=1.981;VQSLOD=1.2463;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:18:2.56:0,3,26	1/1:5,2:8:8.68:81,9,0	./.	./.	./.	0/1:16,3:22:2.12:192,0,2	1/1:20,5:29:9.15:258,9,0	1/1:23,0:21:4.84:65,5,0	1/1:9,4:17:23.42:231,23,0	1/1:11,2:15:21.06:237,21,0	1/1:10,2:13:8.86:82,9,0	0/0:23,0:27:21.23:0,21,128	0/1:13,2:17:4.13:141,0,4	1/1:13,0:14:3.01:32,3,0	1/1:16,1:19:14.61:124,15,0	1/1:23,7:31:38.94:421,39,0	1/1:14,3:18:20.42:201,20,0	1/1:14,3:20:17.71:164,18,0	1/1:25,0:22:7.79:49,8,0	1/1:14,3:18:17.88:183,18,0	1/1:44,4:47:21.23:372,21,0	0/1:16,0:18:36.90:59,0,37	0/0:13,0:13:2.68:0,3,33	0/0:26,0:24:9.86:0,10,76	1/1:12,3:13:6.01:68,6,0	1/1:18,0:20:12.55:157,13,0	1/1:11,3:16:17.85:171,18,0	1/1:13,4:18:23.90:250,24,0
chr10	34090235	.	ACTCTCTCTCTCT	A	788.83	PASS	AB=0.847;AC=14;AF=0.700;AN=20;BaseQRankSum=0.778;DP=280;FS=10.792;HRun=0;HaplotypeScore=90.7116;InbreedingCoeff=0.1451;MQ=63.84;MQ0=21;MQRankSum=1.713;QD=12.33;ReadPosRankSum=0.778;VQSLOD=1.1366;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	./.	./.	./.	./.	./.	1/1:9,0:7:3.01:79,3,0	./.	1/1:5,0:7:2.98:21,3,0	0/0:10,0:10:0.89:0,1,2	./.	./.	1/1:11,0:12:3.01:72,3,0	0/0:8,0:6:0.89:0,1,2	0/1:6,0:6:41.63:78,0,42	1/1:8,1:10:6.02:173,6,0	./.	./.	./.	0/1:7,2:8:0:0,0,0	./.	./.	1/1:4,0:7:9.03:260,9,0	1/1:1,1:3:6.02:184,6,0	./.
chr10	34091629	.	TC	T	499.81	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.307;DP=585;FS=0.000;HRun=3;HaplotypeScore=61.5772;InbreedingCoeff=0.9993;MQ=79.55;MQ0=0;MQRankSum=-2.236;QD=27.77;ReadPosRankSum=0.663;VQSLOD=2.5978;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,18:18:48.15:595,48,0	0/0:14,0:14:39.13:0,39,561	0/0:19,0:18:34.31:0,34,552	0/0:24,0:24:52.86:0,53,754	0/0:33,0:33:93.28:0,93,1299	0/0:21,0:21:63.21:0,63,906	0/0:19,0:19:57.16:0,57,781	0/0:27,0:27:66.22:0,66,935	0/0:14,0:14:42.14:0,42,605	0/0:36,0:36:99:0,105,1493	0/0:26,0:26:78.26:0,78,1123	0/0:26,0:26:78.22:0,78,1096	0/0:22,0:22:66.22:0,66,950	0/0:12,0:12:36.12:0,36,518	0/0:23,0:23:66.22:0,66,950	0/0:23,0:23:69.23:0,69,993	0/0:26,0:26:72.24:0,72,1035	0/0:20,0:20:57.15:0,57,796	0/0:17,0:17:51.17:0,51,733	0/0:22,0:22:66.22:0,66,946	0/0:21,0:21:60.19:0,60,843	0/0:12,0:12:36.08:0,36,493	0/0:18,0:18:54.17:0,54,759	0/0:18,0:18:51.16:0,51,716	0/0:19,0:19:54.16:0,54,757	0/0:18,0:18:54.18:0,54,775	0/0:25,0:25:75.25:0,75,1077	0/0:12,0:12:36.12:0,36,518
chr10	34091708	.	GAATAAAAAA	G	71.54	PASS	AB=0.913;AC=7;AF=0.125;AN=56;BaseQRankSum=6.049;DP=528;FS=15.443;HRun=0;HaplotypeScore=111.3653;InbreedingCoeff=-0.1429;MQ=66.38;MQ0=32;MQRankSum=-3.111;QD=0.65;ReadPosRankSum=3.868;VQSLOD=1.0757;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:51.02:0,51,687	0/1:7,0:7:49.22:49,0,115	0/0:62,0:11:12.73:0,13,142	0/0:79,0:18:30.68:0,31,215	0/0:19,0:19:49.53:0,50,371	0/0:20,0:20:48.40:0,48,406	0/0:12,0:12:27.30:0,27,207	0/0:16,0:16:38.44:0,38,298	0/0:17,0:16:44.75:0,45,343	0/0:19,0:17:49.23:0,49,460	0/0:12,0:12:29.86:0,30,236	0/0:14,0:13:38.49:0,38,286	0/0:11,0:10:25.16:0,25,196	0/0:14,0:13:35.45:0,35,269	0/0:15,0:15:32.82:0,33,257	0/0:13,0:13:35.68:0,36,279	0/0:15,0:15:35.86:0,36,310	0/0:15,0:14:14.74:0,15,235	0/0:19,0:19:1.67:0,2,297	0/0:12,0:12:29.85:0,30,233	0/0:9,0:9:19.21:0,19,182	0/0:8,0:8:17.94:0,18,145	0/1:16,0:16:6.97:7,0,244	0/1:15,0:15:2.96:3,0,241	0/1:9,0:9:17.64:18,0,143	0/1:15,0:16:22.99:23,0,317	0/1:10,6:16:49.07:49,0,171	0/1:24,6:20:44.70:45,0,196
chr10	34092068	.	GGA	G	15811.79	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=7.382;DP=733;FS=15.483;HRun=0;HaplotypeScore=150.2510;InbreedingCoeff=0.9574;MQ=72.39;MQ0=10;MQRankSum=-1.031;QD=31.25;ReadPosRankSum=2.380;VQSLOD=5.6048;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,99,1600	1/1:0,10:10:30.10:382,30,0	0/0:47,0:28:43.53:0,44,523	0/0:58,2:33:2:0,2,470	1/1:2,22:24:51.16:649,51,0	1/1:3,13:16:36.12:458,36,0	1/1:0,20:20:54.17:687,54,0	1/1:6,27:33:77.92:959,78,0	1/1:0,21:21:57.18:726,57,0	1/1:3,18:21:54.17:685,54,0	1/1:1,15:16:36.11:453,36,0	0/0:27,0:27:75.25:0,75,1227	1/1:6,23:29:57.18:726,57,0	1/1:1,21:22:60.19:764,60,0	1/1:3,24:27:66.21:840,66,0	1/1:0,30:30:84.27:1069,84,0	1/1:3,21:24:59.39:758,59,0	1/1:1,21:22:63.20:798,63,0	1/1:6,13:19:39.12:497,39,0	1/1:2,22:24:60.19:758,60,0	1/1:2,27:29:69.22:878,69,0	1/1:2,16:18:45.14:573,45,0	0/0:21,0:21:51.17:0,51,838	0/0:37,0:37:99:0,99,1642	1/1:2,25:27:66.10:840,66,0	1/1:3,31:34:93.28:1167,93,0	1/1:4,26:30:66.04:839,66,0	1/1:1,9:10:24.08:306,24,0
chr10	34093046	.	AAAAAC	A	15402.03	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=6.023;DP=711;FS=20.427;HRun=0;HaplotypeScore=133.4468;InbreedingCoeff=0.9725;MQ=59.19;MQ0=7;MQRankSum=1.005;QD=29.12;ReadPosRankSum=1.559;VQSLOD=3.3527;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:41:54.17:0,54,1139	1/1:1,7:8:18.06:335,18,0	0/0:32,0:18:18.60:0,19,349	0/0:31,0:13:8.87:0,9,183	1/1:6,34:40:93.02:1535,93,0	1/1:3,10:13:15.05:279,15,0	1/1:12,15:27:21.07:390,21,0	1/1:16,20:36:60.11:961,60,0	1/1:4,0:16:15.04:174,15,0	1/1:6,26:32:78.24:1354,78,0	1/1:4,11:15:30.06:522,30,0	0/0:24,0:24:63.22:0,63,1731	1/1:5,13:18:18.05:335,18,0	1/1:1,12:13:27.09:502,27,0	1/1:10,15:25:30.10:558,30,0	1/1:4,22:26:51.17:948,51,0	1/1:6,27:33:54.19:1004,54,0	1/1:11,13:24:24.08:446,24,0	1/1:17,11:27:33.10:582,33,0	1/1:10,22:32:63.18:1131,63,0	1/1:6,11:17:21.07:390,21,0	1/1:8,20:28:57.20:1059,57,0	0/0:26,0:26:63.21:0,63,1714	0/0:28,0:28:51.53:0,52,1338	1/1:4,25:29:36.12:669,36,0	1/1:4,21:25:63.22:1169,63,0	1/1:11,23:34:38.83:724,39,0	1/1:1,9:10:18.06:335,18,0
chr10	34093521	.	T	TTC	565.62	PASS	AB=0.992;AC=29;AF=0.630;AN=46;BaseQRankSum=-2.275;DP=558;FS=1.418;HRun=0;HaplotypeScore=94.0012;InbreedingCoeff=0.0244;MQ=63.73;MQ0=27;MQRankSum=0.405;QD=1.58;ReadPosRankSum=0.984;VQSLOD=1.6535;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:22:7.67:8,0,41	1/1:2,0:2:3.79:18,4,0	./.	./.	0/1:18,0:19:3.59:35,0,4	1/1:18,0:16:11.72:95,12,0	0/1:18,0:17:22.70:23,0,57	./.	0/1:12,0:13:7.97:22,0,8	1/1:25,0:23:5.89:37,6,0	0/1:12,0:11:0:0,0,0	0/0:20,0:20:8.18:0,8,53	0/1:18,2:20:2.76:169,0,3	1/1:12,0:12:3:27,3,0	0/1:23,0:23:3.80:4,0,5	0/1:32,0:29:10.95:51,0,11	0/0:22,0:19:2.68:0,3,11	0/1:13,0:12:13.77:20,0,14	0/1:14,0:14:0:0,0,0	0/1:26,0:25:0:0,0,0	./.	./.	1/1:17,0:18:3.01:35,3,0	1/1:18,0:15:3.45:44,3,0	1/1:22,0:20:3.67:34,4,0	1/1:12,2:13:5.91:60,6,0	0/0:24,0:23:2.01:0,2,6	1/1:15,0:12:0.89:2,1,0
chr10	34093563	.	CTCTCTCTCTT	C	2738.32	PASS	AB=1.000;AC=31;AF=0.554;AN=56;BaseQRankSum=-7.967;DP=488;FS=3.359;HRun=0;HaplotypeScore=119.0698;InbreedingCoeff=-0.2184;MQ=52.30;MQ0=28;MQRankSum=3.351;QD=6.54;ReadPosRankSum=-2.328;VQSLOD=1.9706;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:22:9.39:230,0,9	0/1:9,0:9:10.34:10,0,127	0/0:2,0:1:2.96:0,3,19	0/0:2,0:2:5.05:0,5,43	1/1:15,0:14:10.30:174,10,0	1/1:27,0:25:7.50:348,8,0	0/1:21,0:20:3.32:203,0,3	0/1:28,0:18:48.26:59,0,48	1/1:2,12:14:5.93:113,6,0	0/1:15,0:14:72.53:73,0,108	0/1:11,0:10:77.53:78,0,198	1/1:8,18:25:7.55:156,8,0	0/1:26,0:23:99:142,0,132	1/1:2,15:17:2.16:86,2,0	0/0:24,0:23:6:0,6,66	0/1:36,0:35:99:200,0,706	1/1:25,0:22:6:62,6,0	0/1:13,0:11:70.69:71,0,244	0/1:10,0:9:40.94:41,0,72	1/1:11,0:11:2.18:152,2,0	0/1:14,0:13:46.99:98,0,47	0/1:8,0:8:40.59:81,0,41	0/1:14,0:14:4.01:38,0,4	1/1:22,0:17:29.30:328,29,0	0/1:14,0:13:42.54:150,0,43	0/1:18,0:13:3:3,0,195	0/0:29,0:29:3.48:0,3,40	0/0:12,0:8:2.98:0,3,22
chr10	34093565	.	CTCTCTCTT	C	2996.74	PASS	AB=0.992;AC=36;AF=0.643;AN=56;BaseQRankSum=-7.600;DP=484;FS=0.618;HRun=0;HaplotypeScore=109.6498;InbreedingCoeff=-0.0649;MQ=55.07;MQ0=26;MQRankSum=4.714;QD=7.00;ReadPosRankSum=-0.395;VQSLOD=2.1979;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:22:17.83:278,18,0	0/1:9,0:9:31.04:31,0,58	0/0:4,0:3:5.62:0,6,30	0/0:2,0:2:5.93:0,6,54	1/1:14,0:13:26.55:221,27,0	1/1:26,0:24:24.28:304,24,0	0/1:23,0:22:1:225,0,1	0/1:28,0:18:0.57:92,0,1	1/1:14,0:14:5.85:77,6,0	0/1:16,0:15:18.83:134,0,19	0/1:9,0:9:77.54:78,0,136	1/1:26,0:25:7.33:96,7,0	0/1:25,0:22:50.67:153,0,51	1/1:17,0:17:2.16:54,2,0	0/0:22,0:21:0.28:0,0,27	0/1:37,0:36:99:263,0,479	1/1:4,20:21:3.35:83,3,0	0/1:13,0:11:96.09:96,0,129	0/1:10,0:9:1.29:98,0,1	1/1:11,0:11:26.12:223,26,0	1/1:14,0:13:15.91:124,16,0	1/1:7,0:7:0.48:107,0,0	0/1:15,0:15:0.89:7,0,1	1/1:22,0:17:8.07:203,8,0	0/1:14,0:13:28.02:118,0,28	0/1:18,0:13:59.76:60,0,78	0/0:28,0:28:3.27:0,3,14	1/1:10,0:8:2.98:22,3,0
chr10	34093569	.	CTCTT	C	4400.32	PASS	AB=1.000;AC=46;AF=0.821;AN=56;BaseQRankSum=-7.199;DP=487;FS=29.103;HRun=0;HaplotypeScore=84.3399;InbreedingCoeff=-0.0062;MQ=55.63;MQ0=22;MQRankSum=1.821;QD=9.17;ReadPosRankSum=2.470;VQSLOD=2.2551;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:21:13.34:174,0,13	1/1:9,0:9:10.20:69,10,0	0/0:7,0:5:8.62:0,9,57	0/1:2,0:2:3.27:3,0,31	1/1:17,0:16:22.94:244,23,0	1/1:25,0:24:50.06:396,50,0	0/1:20,0:19:26.85:238,0,27	1/1:30,0:21:18.06:165,18,0	0/1:13,0:13:17.86:30,0,18	1/1:19,0:18:42.99:355,43,0	0/1:11,0:10:16.69:101,0,17	0/1:24,0:23:26.60:27,0,28	1/1:24,0:21:43.67:454,44,0	1/1:16,0:16:2.15:29,2,0	1/1:24,0:23:3.55:56,4,0	0/1:37,0:36:72.47:319,0,72	1/1:22,0:19:3.01:36,3,0	0/1:13,0:11:17.10:166,0,17	1/1:10,0:9:17.93:168,18,0	1/1:11,0:11:26.12:223,26,0	1/1:14,0:13:23.95:196,24,0	1/1:9,0:9:23.97:199,24,0	1/1:15,0:15:1.32:32,1,0	1/1:23,0:19:26.95:234,27,0	1/1:11,1:11:20.61:214,21,0	1/1:18,0:13:23.74:215,24,0	1/1:0,29:29:2.22:56,2,0	1/1:9,0:8:0.50:2,0,0
chr10	34093571	.	CTT	C	4922.02	PASS	AB=1.000;AC=51;AF=0.911;AN=56;BaseQRankSum=-5.728;DP=489;FS=19.502;HRun=3;HaplotypeScore=73.1425;InbreedingCoeff=0.2856;MQ=57.28;MQ0=21;MQRankSum=0.437;QD=10.23;ReadPosRankSum=2.546;VQSLOD=0.5367;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:22:50.16:360,50,0	1/1:8,0:8:16.86:144,17,0	0/0:8,0:6:8.62:0,9,57	0/1:2,0:2:1.50:1,0,32	1/1:17,0:16:34.09:245,34,0	1/1:24,0:23:44.57:388,45,0	0/1:21,0:20:21.91:265,0,22	1/1:30,0:21:20.51:171,21,0	1/1:13,0:13:5.77:34,6,0	1/1:19,0:18:48.06:381,48,0	1/1:11,0:10:20.52:169,21,0	0/1:24,0:23:12.48:12,0,84	1/1:24,0:21:24.60:319,25,0	1/1:16,0:16:2.02:12,2,0	1/1:2,21:22:5.98:75,6,0	1/1:38,1:38:51.02:532,51,0	1/1:22,0:19:2.98:22,3,0	1/1:11,0:9:9.46:213,9,0	1/1:10,0:9:18.49:168,18,0	1/1:14,0:14:38.14:323,38,0	1/1:13,0:12:23.96:196,24,0	1/1:9,0:9:23.97:199,24,0	1/1:3,11:15:0.27:2,0,0	1/1:21,0:18:29.30:239,29,0	1/1:13,0:12:12.12:165,12,0	1/1:18,0:13:26.68:216,27,0	1/1:29,0:29:2.71:25,3,0	1/1:3,7:9:3.01:46,3,0
chr10	34093999	.	ATG	A	1327.90	PASS	AB=0.982;AC=34;AF=0.607;AN=56;BaseQRankSum=6.474;DP=260;FS=1.881;HRun=0;HaplotypeScore=52.0514;InbreedingCoeff=0.1114;MQ=82.24;MQ0=1;MQRankSum=-0.626;QD=6.01;ReadPosRankSum=6.962;VQSLOD=2.2384;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:24.45:0,24,211	1/1:2,0:2:2.22:7,2,0	0/0:13,0:11:4.86:0,5,175	0/1:8,0:7:11.73:12,0,42	0/1:13,2:15:14.49:109,0,14	1/1:13,0:13:5.58:64,6,0	1/1:9,1:10:18.13:106,18,0	1/1:14,0:14:22.02:60,22,0	0/1:8,0:8:15.05:15,0,57	0/1:8,0:8:3.72:4,0,90	1/1:6,0:6:13.70:45,14,0	0/0:5,0:5:12.46:0,12,135	0/1:9,0:9:2.15:52,0,2	1/1:2,2:4:4.53:87,5,0	0/1:4,0:4:14.13:26,0,14	1/1:11,1:12:24.17:116,24,0	1/1:19,2:21:1.18:173,1,0	0/1:11,0:11:1.33:65,0,1	0/1:9,0:9:13.36:13,0,59	1/1:7,2:9:22.56:130,23,0	0/1:15,0:15:12.24:79,0,12	1/1:8,0:8:12.51:74,13,0	0/0:4,0:4:9.03:0,9,162	0/0:6,0:6:18:0,18,252	0/1:8,1:9:20.32:88,0,20	0/1:12,0:12:18.11:41,0,18	1/1:11,1:12:27.40:132,27,0	0/1:2,0:2:2.60:3,0,16
chr10	34094000	.	TGG	T	5319.15	PASS	AB=0.762;AC=46;AF=0.821;AN=56;BaseQRankSum=-2.731;DP=261;FS=1.630;HRun=11;HaplotypeScore=39.7306;InbreedingCoeff=0.6459;MQ=82.82;MQ0=1;MQRankSum=-1.067;QD=22.93;ReadPosRankSum=3.667;VQSLOD=3.7124;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:1,1:11:6.20:6,0,52	1/1:0,2:2:3.01:32,3,0	0/0:13,0:11:14.59:0,15,142	0/1:9,0:7:16.45:16,0,23	1/1:4,11:15:31.37:347,31,0	1/1:1,12:13:36.08:383,36,0	1/1:1,9:10:21.05:222,21,0	1/1:2,12:14:36.09:383,36,0	1/1:3,5:8:9:96,9,0	1/1:4,4:8:12:128,12,0	1/1:0,6:6:18.05:192,18,0	0/0:6,0:6:10.26:0,10,119	1/1:1,8:9:24.06:255,24,0	1/1:3,1:4:11.92:109,12,0	1/1:1,3:4:9.02:96,9,0	1/1:1,11:12:30.07:319,30,0	1/1:4,17:21:51.12:542,51,0	1/1:1,10:11:24.06:255,24,0	1/1:3,6:9:15.02:160,15,0	1/1:2,7:9:27.07:287,27,0	1/1:2,13:15:36.09:383,36,0	1/1:0,7:8:14.95:215,15,0	0/0:4,0:4:9.03:0,9,139	0/0:6,0:6:18.06:0,18,265	1/1:2,6:8:18.04:191,18,0	1/1:2,10:12:30.05:319,30,0	1/1:1,11:12:33.08:351,33,0	1/1:1,1:2:3.01:32,3,0
chr10	34094256	.	TG	T	14614.76	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-3.023;DP=590;FS=2.704;HRun=7;HaplotypeScore=59.5815;InbreedingCoeff=0.9590;MQ=88.17;MQ0=0;MQRankSum=-11.161;QD=27.06;ReadPosRankSum=6.555;VQSLOD=4.8656;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,35:38:99:1010,99,0	1/1:0,3:3:9.02:92,9,0	0/0:23,0:23:63.14:0,63,752	0/0:27,0:27:55.12:0,55,862	1/1:2,9:11:24.05:245,24,0	1/1:1,19:20:54.12:551,54,0	1/1:1,22:23:60.13:612,60,0	1/1:2,31:33:90.18:910,90,0	1/1:1,17:18:51.12:520,51,0	1/1:4,14:18:42.09:428,42,0	1/1:0,9:9:27.06:275,27,0	1/1:0,22:22:57.13:581,57,0	1/1:0,23:23:66.15:673,66,0	1/1:2,14:16:36.08:367,36,0	1/1:2,33:35:99:1010,99,0	1/1:3,27:30:75.16:765,75,0	1/1:1,30:31:87.20:888,87,0	1/1:1,16:17:48.11:490,48,0	1/1:0,26:26:78.08:764,78,0	1/1:3,9:12:27.06:275,27,0	1/1:1,36:37:99:1040,102,0	1/1:2,7:9:24.01:233,24,0	1/1:1,16:17:48.11:490,48,0	1/1:3,35:38:93.21:949,93,0	1/1:1,6:7:15.03:153,15,0	1/1:2,19:21:54.02:530,54,0	1/1:1,17:18:51.11:520,51,0	1/1:0,8:8:24.05:245,24,0
chr10	34094753	.	TA	T	3691.73	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=11.452;DP=657;FS=1.726;HRun=5;HaplotypeScore=65.0718;InbreedingCoeff=0.9987;MQ=76.35;MQ0=0;MQRankSum=-2.149;QD=29.53;ReadPosRankSum=0.972;VQSLOD=4.2373;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,123,1645	0/0:7,0:7:21.07:0,21,287	0/0:27,0:23:44.51:0,45,599	0/0:22,0:20:32.28:0,32,457	1/1:1,30:31:87.25:985,87,0	1/1:0,32:32:78.22:885,78,0	1/1:0,17:17:42.12:476,42,0	0/0:50,0:50:99:0,132,1765	1/1:0,20:20:54.15:612,54,0	0/0:33,0:33:93.30:0,93,1250	0/0:18,0:18:51.17:0,51,697	0/0:22,0:22:63.18:0,63,829	0/0:17,0:17:48.16:0,48,656	0/0:18,0:18:48.15:0,48,638	0/0:20,0:20:60.20:0,60,821	0/0:20,0:20:60.20:0,60,821	1/1:0,25:25:66.15:734,66,0	0/0:20,0:20:51.17:0,51,697	0/0:24,0:24:66.19:0,66,858	0/0:23,0:23:66.21:0,66,886	0/0:29,0:29:78.22:0,78,1031	0/0:19,0:19:54.17:0,54,721	0/0:26,0:26:69.17:0,69,905	0/0:15,0:15:45.15:0,45,615	0/0:19,0:19:57.19:0,57,778	0/0:22,0:22:66.19:0,66,860	0/0:29,0:29:81.26:0,81,1096	0/0:9,0:9:27.09:0,27,369
chr10	34096624	.	CAG	C	19530.01	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=4.704;DP=674;FS=2.859;HRun=0;HaplotypeScore=88.9283;InbreedingCoeff=0.9960;MQ=77.83;MQ0=9;MQRankSum=-4.258;QD=35.44;ReadPosRankSum=3.866;VQSLOD=7.3716;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,38:44:99:1469,105,0	1/1:0,13:12:30.10:413,30,0	0/0:17,0:17:33.48:0,33,732	0/0:27,0:24:56.58:0,57,945	1/1:1,22:22:51.17:699,51,0	1/1:2,24:26:63.21:882,63,0	1/1:1,14:16:38.81:546,39,0	1/1:2,26:28:78.26:1092,78,0	1/1:1,20:21:54.18:756,54,0	1/1:0,19:19:57.19:798,57,0	1/1:0,20:20:54.18:750,54,0	0/0:25,0:25:75.26:0,75,1332	1/1:0,16:17:30.10:420,30,0	1/1:1,20:21:57.19:798,57,0	1/1:0,31:31:90.30:1260,90,0	1/1:1,36:37:99:1386,99,0	1/1:4,25:28:60.20:840,60,0	1/1:0,17:17:48.16:672,48,0	1/1:1,14:14:39.13:546,39,0	1/1:0,24:24:69.23:955,69,0	1/1:0,22:21:57.19:798,57,0	1/1:1,31:30:81.16:1093,81,0	0/0:26,0:26:69.22:0,69,1213	0/0:28,0:28:72.25:0,72,1296	1/1:1,22:23:60.20:840,60,0	1/1:5,28:33:84.28:1174,84,0	1/1:1,31:32:81.27:1134,81,0	1/1:0,8:6:15.05:210,15,0
chr10	34098826	.	AACACACACATACAC	A	4909.74	PASS	AB=0.549;AC=43;AF=0.796;AN=54;BaseQRankSum=0.461;DP=481;FS=10.192;HRun=0;HaplotypeScore=148.2319;InbreedingCoeff=0.7074;MQ=63.16;MQ0=8;MQRankSum=-2.554;QD=16.15;ReadPosRankSum=1.919;VQSLOD=3.3470;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:6,0:23:3.01:79,3,0	1/1:0,0:7:6.02:128,6,0	0/0:31,0:18:19.90:0,20,288	0/0:46,0:32:13.98:0,14,442	1/1:5,0:13:5.88:119,6,0	0/1:5,23:28:9.92:236,0,10	1/1:20,0:20:32.70:282,33,0	1/1:19,0:19:32.88:264,33,0	1/1:10,0:10:11.71:97,12,0	1/1:13,0:13:32.28:257,32,0	1/1:13,0:13:16.79:128,17,0	0/0:25,0:26:44.25:0,44,623	1/1:3,11:14:6.02:245,6,0	1/1:16,0:16:26.46:216,26,0	1/1:15,0:16:23.61:232,24,0	1/1:10,6:16:38.79:952,39,0	1/1:17,1:18:32.80:346,33,0	1/1:8,1:8:20.96:266,21,0	1/1:8,0:8:21.87:183,22,0	1/1:4,1:12:5.93:67,6,0	./.	1/1:9,0:9:8.98:72,9,0	0/0:15,0:15:26.39:0,26,690	0/0:22,0:24:19.55:0,20,547	1/1:2,9:12:9.03:313,9,0	1/1:1,10:11:25.79:204,26,0	1/1:1,11:13:6.02:179,6,0	1/1:2,0:2:5.98:46,6,0
chr10	34098836	.	T	TACACAC	355.88	PASS	AB=1.000;AC=20;AF=0.476;AN=42;BaseQRankSum=-5.450;DP=496;FS=17.921;HRun=0;HaplotypeScore=117.2274;InbreedingCoeff=0.4390;MQ=52.32;MQ0=33;MQRankSum=4.166;QD=1.57;ReadPosRankSum=-3.309;VQSLOD=0.1445;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:21:0:0,0,0	0/0:8,0:7:5.98:0,6,47	./.	./.	0/0:9,0:9:3.01:0,3,42	0/0:26,0:25:3.31:0,3,15	1/1:24,0:23:7.24:28,7,0	./.	0/1:15,0:14:6.07:6,0,11	1/1:18,0:15:7.57:35,8,0	1/1:14,0:11:2.88:15,3,0	1/1:29,0:29:13.84:152,14,0	0/0:13,0:12:6.02:0,6,78	1/1:20,0:17:1.82:5,2,0	1/1:19,0:15:1.80:5,2,0	0/0:19,0:14:19.70:0,20,167	0/0:17,0:17:5.93:0,6,59	0/1:13,0:8:0.17:0,0,9	./.	./.	1/1:28,0:26:1.82:5,2,0	./.	1/1:14,0:14:9.03:163,9,0	1/1:16,15:31:4.50:72,5,0	0/0:13,0:12:1.93:0,2,13	0/0:14,0:12:2.60:0,3,10	0/0:17,0:15:4.03:0,4,44	./.
chr10	34100753	.	A	AG	302.05	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.101;DP=566;FS=70.983;HRun=2;HaplotypeScore=117.4218;InbreedingCoeff=0.7742;MQ=69.39;MQ0=1;MQRankSum=-8.281;QD=11.62;ReadPosRankSum=-0.364;VQSLOD=-0.3490;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:14,12:26:31.52:396,32,0	0/0:7,0:7:18.04:0,18,207	0/0:27,0:21:33.96:0,34,370	0/0:18,0:14:25.51:0,26,349	0/0:44,0:44:0.17:0,0,140	0/0:22,0:22:33.74:0,34,143	0/0:25,0:25:32.41:0,32,151	0/0:34,0:34:99:0,99,1181	0/0:25,0:25:40.34:0,40,153	0/0:14,0:14:42.12:0,42,502	0/0:11,0:11:24.06:0,24,277	0/0:15,0:15:23.50:0,24,70	0/0:16,0:16:45.13:0,45,534	0/0:17,0:17:45.05:0,45,499	0/0:21,0:21:57.15:0,57,680	0/0:22,0:22:60.11:0,60,653	0/0:19,0:19:26.22:0,26,122	0/0:21,0:20:54.10:0,54,615	0/0:11,0:10:30.08:0,30,355	0/0:20,0:20:45:0,45,495	0/0:15,0:15:42.11:0,42,488	0/0:15,0:15:33.08:0,33,385	0/0:18,0:18:18.35:0,18,68	0/0:22,0:22:19.68:0,20,69	0/0:19,0:19:45.13:0,45,536	0/0:20,1:21:31.11:0,31,666	0/0:20,0:20:60.14:0,60,686	0/0:21,0:21:57.18:0,57,702
chr10	34100755	.	G	GGT	713.35	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.968;DP=572;FS=53.807;HRun=0;HaplotypeScore=131.9875;InbreedingCoeff=0.9477;MQ=70.02;MQ0=1;MQRankSum=-5.067;QD=21.62;ReadPosRankSum=-3.167;VQSLOD=1.0141;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:18,14:33:59.21:808,59,0	0/0:6,0:6:18.04:0,18,261	0/0:31,0:25:29.94:0,30,506	0/0:17,0:13:25.53:0,26,441	0/0:43,0:43:99:0,112,645	0/0:22,0:22:58.55:0,59,367	0/0:25,0:25:60.71:0,61,388	0/0:36,0:37:72.65:0,73,1501	0/0:25,0:25:58.90:0,59,380	0/0:14,0:14:42.13:0,42,636	0/0:9,0:9:27.03:0,27,364	0/0:14,0:14:35.32:0,35,219	0/0:16,0:16:45.13:0,45,678	0/0:17,0:17:45.06:0,45,621	0/0:21,0:21:60.14:0,60,890	0/0:21,0:21:60.13:0,60,809	0/0:18,0:18:48.80:0,49,302	0/0:21,0:20:57.08:0,57,792	0/0:11,0:10:30.09:0,30,459	0/0:17,0:17:47.99:0,48,640	0/0:15,0:15:45.08:0,45,632	0/0:15,0:15:33.07:0,33,486	0/0:19,0:19:28.40:0,28,246	0/0:22,0:22:12.06:0,12,226	0/0:19,0:19:45.14:0,45,682	0/0:22,0:22:16.33:0,16,829	0/0:20,0:20:60.16:0,60,858	0/0:21,0:21:57.19:0,57,910
chr10	34100756	.	T	TG	1765	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-6.054;DP=570;FS=25.354;HRun=2;HaplotypeScore=118.0375;InbreedingCoeff=0.9957;MQ=69.97;MQ0=1;MQRankSum=-2.558;QD=32.09;ReadPosRankSum=1.994;VQSLOD=1.7832;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:47.50:0,47,168	0/0:6,0:6:18.05:0,18,235	0/0:34,0:25:46.75:0,47,570	0/0:18,0:14:36.44:0,36,411	0/0:44,0:44:26.99:0,27,192	0/0:22,0:22:43.68:0,44,193	0/0:25,0:25:42.38:0,42,175	0/0:38,0:38:93.39:0,93,1343	0/0:25,0:25:45.34:0,45,176	0/0:14,0:14:42.13:0,42,558	0/0:9,0:9:27.07:0,27,344	1/1:0,14:14:36.12:514,36,0	0/0:16,0:16:48.13:0,48,620	0/0:15,0:15:39.11:0,39,511	0/0:21,0:21:60.18:0,60,791	0/0:20,0:20:54.14:0,54,681	0/0:18,0:18:28.39:0,28,134	0/0:19,0:18:57.12:0,57,719	0/0:13,0:12:30.09:0,30,400	0/0:16,0:16:45.06:0,45,567	0/0:15,0:15:45.12:0,45,573	0/0:15,0:15:36.09:0,36,452	1/1:1,18:19:48.14:666,48,0	1/1:0,22:22:51.17:728,51,0	0/0:19,0:19:45.14:0,45,598	0/0:21,0:21:62.53:0,63,781	0/0:20,0:20:60.12:0,60,764	0/0:21,0:21:57.19:0,57,787
chr10	34100760	.	T	TTTTTTG	1530.05	PASS	AB=0.975;AC=4;AF=0.071;AN=56;BaseQRankSum=-1.526;DP=573;FS=25.177;HRun=0;HaplotypeScore=171.4340;InbreedingCoeff=0.4546;MQ=66.73;MQ0=1;MQRankSum=-6.318;QD=23.18;ReadPosRankSum=-1.275;VQSLOD=1.7125;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:17,12:29:65.85:1590,66,0	0/0:6,0:6:15.05:0,15,318	0/0:33,0:24:47.72:0,48,683	0/0:19,0:15:32.68:0,33,513	0/0:48,0:48:99:0,109,1175	0/0:21,0:21:62.85:0,63,664	0/0:27,0:27:62.41:0,62,672	0/0:38,0:38:99:0,101,1818	0/0:24,0:24:57.02:0,57,627	0/0:17,0:17:39.10:0,39,767	0/0:9,0:9:21.07:0,21,446	0/0:15,0:15:17.05:0,17,357	0/0:14,0:14:42.12:0,42,818	0/0:17,0:17:36.10:0,36,682	0/0:22,0:22:60.17:0,60,1130	0/0:20,0:20:45.11:0,45,869	0/1:18,0:18:19.63:20,0,380	0/0:19,0:18:48.14:0,48,947	0/0:13,0:12:36.10:0,36,629	0/0:16,0:16:39.07:0,39,757	0/0:16,0:16:39.10:0,39,719	0/0:13,0:13:32.93:0,33,608	0/0:18,0:18:50.94:0,51,577	0/0:22,0:22:53.92:0,54,597	0/0:22,0:22:45.12:0,45,875	0/1:18,1:19:35.92:36,0,897	0/0:17,0:17:48.12:0,48,957	0/0:21,0:21:57.18:0,57,1156
chr10	34100761	.	T	TG	4827.26	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-12.958;DP=577;FS=3.890;HRun=0;HaplotypeScore=107.5569;InbreedingCoeff=0.9968;MQ=66.84;MQ0=1;MQRankSum=0.048;QD=34.98;ReadPosRankSum=3.345;VQSLOD=4.4926;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:54.86:0,55,226	0/0:6,0:6:18.05:0,18,234	0/0:34,0:25:52.75:0,53,614	0/0:20,0:16:42.10:0,42,499	1/1:0,48:48:99:1673,129,0	1/1:0,21:21:63.08:846,63,0	1/1:0,27:27:63.21:896,63,0	0/0:38,0:38:99:0,111,1432	1/1:0,24:24:57.19:810,57,0	0/0:17,0:17:45.12:0,45,584	0/0:8,0:8:21.07:0,21,292	0/0:15,0:15:35.14:0,35,154	0/0:14,0:14:42.13:0,42,569	0/0:17,0:17:45.08:0,45,558	0/0:22,0:22:63.17:0,63,828	0/0:21,0:21:57.11:0,57,696	1/1:1,17:18:43.96:602,44,0	0/0:21,0:20:54.13:0,54,700	0/0:13,0:12:36.09:0,36,456	0/0:16,0:16:48.02:0,48,585	0/0:16,0:16:48.12:0,48,606	0/0:14,0:14:33.09:0,33,430	0/0:17,0:17:28.66:0,29,132	0/0:22,0:22:36.38:0,36,148	0/0:22,0:22:54.08:0,54,665	0/0:20,0:20:56.38:0,56,729	0/0:17,0:17:51.16:0,51,696	0/0:21,0:21:57.19:0,57,792
chr10	34100773	.	GT	G	9570.80	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-11.956;DP=569;FS=20.400;HRun=3;HaplotypeScore=90.9066;InbreedingCoeff=0.9945;MQ=67.95;MQ0=1;MQRankSum=0.200;QD=32.66;ReadPosRankSum=1.211;VQSLOD=3.0665;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:32:82.48:0,82,1048	1/1:0,7:7:15.05:186,15,0	0/0:30,0:23:42.12:0,42,710	0/0:23,0:21:48:0,48,738	0/0:46,0:46:99:0,124,1724	0/0:18,0:18:54.18:0,54,777	0/0:29,0:29:69.69:0,70,962	1/1:1,36:37:99:1259,102,0	0/0:22,0:22:61.13:0,61,830	1/1:1,18:19:51.16:628,51,0	1/1:0,8:8:24.08:297,24,0	0/0:16,0:16:42.14:0,42,591	1/1:0,14:14:42.13:519,42,0	1/1:0,15:15:36.11:446,36,0	1/1:1,20:21:54.17:669,54,0	1/1:0,23:23:60.19:744,60,0	0/0:18,0:19:50.20:0,50,676	1/1:0,20:20:54.17:669,54,0	1/1:1,13:13:36.10:432,36,0	1/1:0,14:14:39.12:481,39,0	1/1:1,13:14:33.09:409,33,0	1/1:0,13:13:36:419,36,0	0/0:16,0:16:48.16:0,48,688	0/0:23,0:23:60.20:0,60,845	1/1:0,20:20:48.15:595,48,0	1/1:1,18:19:14.10:626,14,0	1/1:1,15:16:39.47:484,39,0	1/1:0,19:19:57.18:706,57,0
chr10	34101099	.	AC	A	1494.04	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-4.368;DP=397;FS=1.071;HRun=2;HaplotypeScore=54.0466;InbreedingCoeff=0.8543;MQ=61.18;MQ0=30;MQRankSum=5.168;QD=7.95;ReadPosRankSum=-0.669;VQSLOD=0.6795;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:41.42:0,41,268	1/1:5,0:5:8.56:46,9,0	0/0:49,0:17:25.29:0,25,228	0/0:52,0:13:19.93:0,20,180	0/0:21,0:21:60.19:0,60,385	0/0:13,0:13:38.61:0,39,279	0/0:8,0:7:20.75:0,21,140	1/1:21,0:20:42.93:316,43,0	0/0:7,0:6:17.79:0,18,118	1/1:16,0:14:25.07:167,25,0	1/1:1,8:9:17:97,17,0	0/0:15,0:15:43.58:0,44,301	1/1:10,0:11:2.61:8,3,0	1/1:7,0:7:14.99:128,15,0	1/1:12,0:10:8.38:32,8,0	1/1:9,0:9:1.82:5,2,0	0/0:8,0:8:17.80:0,18,123	1/1:9,0:6:5.91:38,6,0	1/1:13,0:10:21.94:213,22,0	1/1:14,0:15:28.38:173,28,0	1/1:7,0:6:13.78:100,14,0	1/1:1,10:11:20.77:138,21,0	0/0:10,0:9:26.35:0,26,158	0/0:7,0:5:11.76:0,12,75	1/1:12,0:12:3.85:11,4,0	1/1:15,0:15:28.73:170,29,0	1/1:9,0:9:6.23:18,6,0	1/1:3,0:2:5.98:47,6,0
chr10	34101100	.	C	CAA	4474.24	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-11.115;DP=394;FS=2.310;HRun=36;HaplotypeScore=50.2093;InbreedingCoeff=0.8859;MQ=62.37;MQ0=27;MQRankSum=3.704;QD=24.19;ReadPosRankSum=-1.512;VQSLOD=2.5605;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:42.13:0,42,540	1/1:0,5:5:9.03:126,9,0	0/0:50,0:17:36.59:0,37,376	0/0:51,0:13:24.30:0,24,245	0/0:21,0:21:63.14:0,63,756	0/0:13,0:13:39.13:0,39,551	0/0:9,0:8:21.06:0,21,268	1/1:5,17:22:54.11:794,54,0	0/0:7,0:6:18.06:0,18,235	1/1:6,11:14:29.76:452,30,0	1/1:10,0:10:17.87:145,18,0	0/0:15,0:15:45.13:0,45,589	1/1:2,7:9:6.02:109,6,0	1/1:5,0:5:15.05:244,15,0	1/1:2,10:10:12.04:200,12,0	1/1:2,7:9:3.01:56,3,0	0/0:8,0:8:18.06:0,18,243	1/1:2,5:5:6.02:75,6,0	1/1:17,0:14:35.79:473,36,0	1/1:2,12:14:30.09:384,30,0	1/1:6,1:6:15.05:243,15,0	1/1:11,0:11:21.45:220,21,0	0/0:10,0:10:27.08:0,27,330	0/0:7,0:5:12.02:0,12,131	1/1:3,10:13:6.02:113,6,0	1/1:2,11:13:33.11:557,33,0	1/1:2,6:8:12.01:194,12,0	1/1:3,0:2:6.02:89,6,0
chr10	34101193	.	GTTTCTCAGGAC	G	6018.66	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=11.787;DP=548;FS=0.524;HRun=0;HaplotypeScore=172.7751;InbreedingCoeff=0.9969;MQ=74.70;MQ0=1;MQRankSum=-11.682;QD=48.93;ReadPosRankSum=3.678;VQSLOD=4.6921;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,28:30:24.08:719,24,0	0/0:13,0:13:30.08:0,30,1300	0/0:20,0:19:50.84:0,51,2084	0/0:25,0:24:65.39:0,65,2519	1/1:4,21:25:51.17:1723,51,0	1/1:2,17:19:27.09:919,27,0	1/1:4,14:18:36.12:1226,36,0	0/0:31,0:30:81.27:0,81,3694	1/1:2,15:17:24.08:818,24,0	0/0:18,0:18:48.16:0,48,2214	0/0:24,0:24:57.20:0,57,3038	0/0:24,0:24:57.20:0,57,2990	0/0:14,0:14:36.12:0,36,1550	0/0:12,0:12:33.11:0,33,1655	0/0:22,0:22:60.18:0,60,2620	0/0:13,0:13:30.10:0,30,1622	1/1:2,12:14:18.06:613,18,0	0/0:27,0:27:81.28:0,81,4150	0/0:17,0:17:36.12:0,36,1390	0/0:19,0:19:42.14:0,42,2151	0/0:28,0:28:75.26:0,75,3953	0/0:13,0:13:33.10:0,33,1449	0/0:18,0:18:48.16:0,48,2518	0/0:30,0:30:75.26:0,75,3883	0/0:17,0:17:36.12:0,36,1490	0/0:15,0:15:42.10:0,42,2108	0/0:13,0:13:39.13:0,39,1664	0/0:12,0:12:36.11:0,36,1722
chr10	34101656	.	TAA	T	2139.22	PASS	AC=40;AF=0.833;AN=48;BaseQRankSum=-2.962;DP=333;FS=0.000;HRun=12;HaplotypeScore=36.4069;InbreedingCoeff=0.5325;MQ=23.11;MQ0=158;MQRankSum=0.537;QD=8.63;ReadPosRankSum=3.561;VQSLOD=-0.5830;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:2:3.01:0,3,34	1/1:1,7:8:18:172,18,0	./.	./.	1/1:4,14:20:8.49:124,8,0	1/1:1,13:11:15.03:153,15,0	1/1:1,8:3:3.01:31,3,0	0/0:7,15:1:2.50:0,2,9	1/1:2,8:4:6.01:61,6,0	1/1:1,8:9:23.79:225,24,0	1/1:4,6:10:12.02:122,12,0	0/0:16,0:7:2.67:0,3,13	1/1:2,10:6:9:91,9,0	1/1:3,8:3:3.01:31,3,0	1/1:3,14:10:12.02:122,12,0	1/1:4,6:5:8.49:54,8,0	1/1:2,12:4:6.01:61,6,0	1/1:4,11:3:2.74:12,3,0	1/1:4,9:4:6:61,6,0	1/1:1,12:13:29.94:305,30,0	./.	1/1:1,8:8:9.02:92,9,0	0/0:8,0:8:14.68:0,15,93	./.	1/1:0,11:11:14.81:152,15,0	1/1:2,11:9:18.03:183,18,0	1/1:2,9:6:8.82:91,9,0	1/1:1,12:6:12.02:122,12,0
chr10	34102779	.	TAA	T	914.84	PASS	AC=18;AF=0.900;AN=20;BaseQRankSum=-1.812;DP=239;FS=0.000;HRun=12;HaplotypeScore=21.4816;InbreedingCoeff=0.2998;MQ=17.71;MQ0=148;MQRankSum=-0.107;QD=9.53;ReadPosRankSum=0.817;VQSLOD=-0.3750;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	1/1:0,6:6:15.03:153,15,0	./.	./.	1/1:4,6:6:2.55:30,3,0	./.	./.	./.	./.	1/1:1,6:4:12.03:122,12,0	1/1:1,12:11:12.03:122,12,0	./.	./.	./.	./.	./.	1/1:4,10:1:3.01:31,3,0	./.	./.	1/1:2,14:17:29.79:357,30,0	./.	./.	0/0:10,0:9:3.01:0,3,38	./.	1/1:2,6:4:2.98:30,3,0	1/1:2,11:4:12.03:122,12,0	./.	1/1:0,8:4:3.01:31,3,0
chr10	34106226	.	G	GA	676.62	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=-3.276;DP=482;FS=1.619;HRun=9;HaplotypeScore=60.5741;InbreedingCoeff=0.7399;MQ=77.44;MQ0=1;MQRankSum=-0.804;QD=10.10;ReadPosRankSum=-1.262;VQSLOD=2.0235;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:68.89:0,69,586	0/0:6,0:6:14.98:0,15,127	0/0:27,0:15:0.82:0,1,164	0/1:26,0:16:24.19:24,0,98	0/0:16,0:16:29.95:0,30,254	0/0:26,0:26:56.93:0,57,487	0/0:24,0:24:59.94:0,60,514	0/0:18,0:19:45.53:0,46,364	0/0:10,0:10:23.97:0,24,205	0/0:13,0:13:29.93:0,30,251	0/0:14,0:14:26.95:0,27,229	1/1:1,19:20:33.09:366,33,0	0/0:12,0:12:26.92:0,27,224	0/0:16,0:16:32.92:0,33,279	0/0:21,0:21:44.96:0,45,388	0/0:23,0:23:41.93:0,42,362	0/0:31,0:33:75.98:0,76,624	0/0:19,0:19:50.95:0,51,434	0/0:14,0:16:34.33:0,34,276	0/0:6,0:6:11.96:0,12,99	0/0:24,0:24:56.97:0,57,495	0/0:9,0:9:20.98:0,21,179	1/1:1,10:11:27.07:299,27,0	1/1:2,8:10:12:133,12,0	0/0:11,0:11:17.96:0,18,154	0/0:12,0:12:26.97:0,27,231	0/0:24,0:24:23.75:0,24,424	0/0:5,0:5:11.74:0,12,83
chr10	34106397	.	GGATCC	G	2195.32	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=7.545;DP=627;FS=0.601;HRun=0;HaplotypeScore=111.2491;InbreedingCoeff=0.9962;MQ=58.99;MQ0=9;MQRankSum=0.478;QD=37.21;ReadPosRankSum=0.407;VQSLOD=3.5811;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:42.12:0,42,1145	0/0:14,0:14:39.13:0,39,1168	0/0:24,0:13:39.13:0,39,1104	0/0:33,0:19:56.41:0,56,1545	0/0:22,0:22:60.21:0,60,1807	0/0:18,0:18:54.19:0,54,1566	0/0:28,0:28:84.29:0,84,2347	0/0:28,0:26:57.20:0,57,1588	0/0:20,0:20:54.17:0,54,1489	0/0:19,0:19:57.20:0,57,1687	0/0:12,0:12:33.10:0,33,923	1/1:1,18:18:42.14:842,42,0	0/0:14,0:14:42.14:0,42,1264	0/0:19,0:19:48.16:0,48,1388	0/0:27,0:27:69.24:0,69,2071	0/0:21,0:21:60.21:0,60,1755	0/0:55,0:55:99:0,144,4198	0/0:27,0:27:69.71:0,70,2072	0/0:22,0:20:54.19:0,54,1560	0/0:19,0:19:57.18:0,57,1491	0/0:43,0:43:99:0,111,3182	0/0:10,0:10:27.09:0,27,807	1/1:2,15:15:27.09:519,27,0	1/1:6,17:23:51.32:977,51,0	0/0:27,0:26:66.23:0,66,1982	0/0:13,0:13:36.11:0,36,970	0/0:28,0:28:78.27:0,78,2310	0/0:7,0:7:18.03:0,18,474
chr10	34106472	.	GA	G	5676.49	PASS	AB=0.738;AC=39;AF=0.696;AN=56;BaseQRankSum=9.872;DP=636;FS=1.580;HRun=12;HaplotypeScore=83.6626;InbreedingCoeff=0.7638;MQ=76.22;MQ0=2;MQRankSum=-2.068;QD=12.59;ReadPosRankSum=2.712;VQSLOD=5.1481;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,103,1007	1/1:3,6:9:17.92:139,18,0	0/1:32,3:21:21.76:22,0,58	0/0:20,0:16:19.21:0,19,173	0/0:22,1:23:36.86:0,37,543	0/0:15,0:15:27.05:0,27,274	0/0:27,0:27:65.76:0,66,657	1/1:9,24:33:36.96:451,37,0	0/0:13,1:14:12.78:0,13,294	0/1:8,7:15:3.59:155,0,4	1/1:3,12:15:35.84:279,36,0	1/1:5,0:29:40.72:118,41,0	1/1:3,16:19:41.83:325,42,0	1/1:2,19:22:49.85:377,50,0	1/1:6,23:29:68.70:534,69,0	1/1:2,14:16:14.39:295,14,0	0/0:47,2:49:88.71:0,89,1257	1/1:4,19:23:48.28:372,48,0	1/1:6,13:20:43.86:329,44,0	1/1:4,16:21:49.84:377,50,0	1/1:8,14:23:40.84:308,41,0	1/1:3,13:16:8.40:248,8,0	1/1:6,0:19:24.60:73,25,0	1/1:4,1:37:59.50:186,59,0	1/1:5,20:26:52.78:401,53,0	1/1:6,18:24:26.32:387,26,0	0/1:4,7:11:6.54:139,0,7	1/1:0,8:8:20.92:162,21,0
chr10	34111506	.	A	AG	309.16	PASS	AB=0.783;AC=5;AF=0.089;AN=56;BaseQRankSum=3.829;DP=515;FS=4.685;HRun=1;HaplotypeScore=73.5523;InbreedingCoeff=0.5058;MQ=54.38;MQ0=10;MQRankSum=-1.074;QD=6.44;ReadPosRankSum=0.748;VQSLOD=0.6772;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:30:57.23:0,57,830	0/0:7,0:7:18.04:0,18,217	0/0:12,0:5:14.88:0,15,133	0/1:8,0:4:1.32:1,0,52	0/0:25,0:24:50.09:0,50,514	0/0:12,0:12:20.43:0,20,183	0/0:18,0:17:40.42:0,40,355	0/0:27,0:27:42.85:0,43,649	0/0:18,0:18:38.70:0,39,414	0/0:21,0:21:61.07:0,61,652	0/0:20,0:19:47.60:0,48,489	0/1:9,5:15:0.81:140,0,1	0/0:11,0:11:33.04:0,33,398	0/0:10,0:10:23.90:0,24,234	0/0:29,0:29:75.07:0,75,843	0/0:23,0:21:48.67:0,49,510	0/0:42,0:42:99:0,101,1147	0/0:16,0:16:38.98:0,39,435	0/0:31,0:29:83.24:0,83,888	0/0:13,0:13:37.84:0,38,349	0/0:17,0:17:37.93:0,38,308	0/0:12,0:11:23.93:0,24,256	1/1:3,6:8:12:141,12,0	0/1:7,8:15:40.28:137,0,40	0/0:17,0:17:43.84:0,44,493	0/0:26,0:26:70.89:0,71,763	0/0:21,0:21:60.04:0,60,640	0/0:7,0:6:15.03:0,15,175
chr10	34111909	.	CG	C	1321.19	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.980;DP=642;FS=24.238;HRun=5;HaplotypeScore=77.2116;InbreedingCoeff=0.9982;MQ=81.95;MQ0=0;MQRankSum=-2.473;QD=26.42;ReadPosRankSum=1.392;VQSLOD=1.9505;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,117,1548	0/0:9,0:9:24.07:0,24,310	0/0:27,0:27:74.98:0,75,903	0/0:33,0:33:78.02:0,78,993	0/0:19,0:19:57.09:0,57,737	0/0:18,0:18:51.16:0,51,682	0/0:26,0:26:72.23:0,72,970	0/0:29,0:29:75.22:0,75,969	0/0:28,0:28:84.25:0,84,1115	0/0:20,0:20:57.18:0,57,765	0/0:11,0:11:30.09:0,30,395	1/1:0,14:14:39.11:442,39,0	0/0:28,0:28:78.23:0,78,1034	0/0:22,0:22:63.19:0,63,828	0/0:38,0:38:99:0,105,1419	0/0:31,0:31:90.30:0,90,1231	0/0:23,0:23:63.21:0,63,861	0/0:10,0:10:24.08:0,24,325	0/0:19,0:19:54.16:0,54,708	0/0:20,0:20:60.18:0,60,788	0/0:38,0:38:96.28:0,96,1278	0/0:17,0:17:48.15:0,48,639	1/1:2,14:16:36.57:409,37,0	1/1:0,20:20:54.15:612,54,0	0/0:16,0:16:48.15:0,48,640	0/0:26,0:26:69.21:0,69,914	0/0:29,0:29:84.28:0,84,1145	0/0:14,0:14:36.12:0,36,492
chr10	34113064	.	T	TGG	3837.56	PASS	AB=1.000;AC=22;AF=0.393;AN=56;BaseQRankSum=-11.117;DP=593;FS=0.960;HRun=7;HaplotypeScore=134.3277;InbreedingCoeff=0.2233;MQ=78.62;MQ0=0;MQRankSum=-1.778;QD=10.90;ReadPosRankSum=0.292;VQSLOD=0.1341;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:46:85.28:0,85,1172	0/0:9,0:9:10.03:0,10,44	0/0:23,0:22:44.65:0,45,464	0/0:26,0:25:32.53:0,33,380	1/1:6,15:21:36.04:515,36,0	1/1:5,20:26:50.66:796,51,0	1/1:4,29:33:60.20:984,60,0	0/1:25,0:25:19.51:20,0,91	1/1:2,16:18:30.10:492,30,0	0/1:22,0:22:8.71:9,0,57	0/1:11,0:11:39.84:40,0,89	1/1:10,0:10:4.37:51,4,0	0/1:13,0:13:11.21:11,0,40	0/0:18,0:18:30.51:0,31,183	0/1:25,0:25:14.78:15,0,84	0/0:30,0:31:13.14:0,13,222	1/1:5,20:25:48.16:788,48,0	0/0:14,0:14:5.83:0,6,73	0/0:15,0:15:7.36:0,7,112	0/0:19,0:19:14.68:0,15,81	0/1:41,0:41:37.72:38,0,135	0/1:10,0:10:33.99:34,0,36	0/0:21,0:21:0.87:0,1,3	0/1:21,0:21:0.17:4,0,0	0/0:13,0:13:15.05:0,15,84	0/1:20,0:19:11.15:11,0,49	0/1:31,0:30:31.05:31,0,159	0/0:6,0:6:4.52:0,5,23
chr10	34113074	.	GTGGT	G	725.07	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=7.770;DP=510;FS=1.569;HRun=0;HaplotypeScore=125.0577;InbreedingCoeff=0.9843;MQ=74.28;MQ0=0;MQRankSum=-5.817;QD=15.43;ReadPosRankSum=-3.028;VQSLOD=3.0968;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,135,3459	0/0:9,0:9:23.99:0,24,364	0/0:23,0:21:60.20:0,60,1367	0/0:21,0:22:15.04:0,15,891	0/0:16,0:16:38.01:0,38,1005	0/0:21,0:21:57.20:0,57,1529	0/0:29,0:29:69.16:0,69,1941	0/0:25,0:25:65.88:0,66,1037	0/0:18,0:18:39.13:0,39,1003	0/0:12,0:12:30.02:0,30,671	0/0:11,0:11:31.98:0,32,538	1/1:14,1:16:16.45:175,16,0	0/0:13,0:13:39.13:0,39,758	0/0:18,0:18:54.08:0,54,1105	0/0:22,0:22:61.02:0,61,1265	0/0:25,0:25:75.15:0,75,1716	0/0:20,0:20:51.18:0,51,1378	0/0:11,0:11:28.91:0,29,650	0/0:14,0:14:38.96:0,39,868	0/0:16,0:16:38.40:0,38,715	0/0:28,0:28:51.19:0,51,1352	0/0:6,0:6:18.06:0,18,416	1/1:4,6:12:26.63:329,27,0	1/1:11,6:19:32.42:362,32,0	0/0:13,0:13:32.86:0,33,708	0/0:12,0:11:27.02:0,27,550	0/0:22,0:22:38.90:0,39,1217	0/0:8,0:8:24.07:0,24,508
chr10	34113498	.	T	TAA	3624.62	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-9.877;DP=674;FS=3.641;HRun=3;HaplotypeScore=79.1077;InbreedingCoeff=0.9883;MQ=92.48;MQ0=2;MQRankSum=-1.673;QD=45.31;ReadPosRankSum=1.484;VQSLOD=3.1520;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:75.21:0,75,1025	0/0:14,0:14:39.13:0,39,544	0/0:27,0:27:75.25:0,75,1046	0/0:30,0:30:84.11:0,84,1107	0/0:10,0:10:27.09:0,27,378	0/0:22,0:22:57.17:0,57,779	0/0:19,0:19:54.16:0,54,738	0/0:26,0:26:72.23:0,72,992	0/0:35,0:35:99:0,105,1468	0/0:34,0:34:90.29:0,90,1246	0/0:12,0:12:36.12:0,36,502	1/1:0,27:27:72.25:1314,72,0	0/0:36,0:36:99:0,105,1468	0/0:26,0:26:78.25:0,78,1075	0/0:38,0:38:99:0,108,1511	0/0:37,0:37:99:0,102,1423	0/0:29,0:29:81.26:0,81,1117	0/0:23,0:23:66.21:0,66,905	0/0:15,0:15:45.14:0,45,614	0/0:16,0:16:45.15:0,45,630	0/0:26,0:26:72.22:0,72,990	0/0:15,0:15:36.10:0,36,483	1/1:1,11:11:27.09:495,27,0	1/1:3,37:40:99:1815,99,0	0/0:19,0:19:54.18:0,54,756	0/0:27,0:27:78.26:0,78,1091	0/0:26,0:26:75.22:0,75,1013	0/0:4,0:4:12.04:0,12,168
chr10	34114017	.	AG	A	1118.40	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=6.298;DP=360;FS=4.868;HRun=4;HaplotypeScore=37.3681;InbreedingCoeff=0.9213;MQ=96.50;MQ0=0;MQRankSum=-3.381;QD=28.68;ReadPosRankSum=2.287;VQSLOD=2.9697;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,105,1470	0/0:3,0:3:9.03:0,9,126	0/0:18,0:18:9.42:0,9,443	0/0:17,0:17:45.13:0,45,577	0/0:7,0:7:15.05:0,15,209	0/0:11,0:11:33.11:0,33,462	0/0:17,0:17:48.16:0,48,672	0/0:29,0:29:78.24:0,78,1048	0/0:19,0:19:54.17:0,54,739	0/0:9,0:9:27.09:0,27,378	0/0:6,0:6:15.05:0,15,210	1/1:0,17:17:48.15:576,48,0	0/0:6,0:6:15.05:0,15,210	0/0:13,0:13:36.09:0,36,468	0/0:10,0:10:30.10:0,30,420	0/0:14,0:14:42.14:0,42,588	0/0:8,0:8:21.07:0,21,294	0/0:4,0:4:12.04:0,12,168	0/0:10,0:10:27.09:0,27,378	0/0:9,0:9:27.09:0,27,377	0/0:16,0:16:45.14:0,45,614	0/0:16,0:16:45.14:0,45,612	1/1:2,7:9:21.06:252,21,0	1/1:0,13:13:36.11:432,36,0	0/0:10,0:10:30.10:0,30,420	0/0:10,0:10:30.10:0,30,419	0/0:19,0:18:54.16:0,54,738	0/0:4,0:4:12.04:0,12,168
chr10	34115022	.	TAA	T	7512.95	PASS	AB=0.800;AC=48;AF=0.857;AN=56;BaseQRankSum=-7.628;DP=588;FS=3.811;HRun=14;HaplotypeScore=97.5760;InbreedingCoeff=0.6634;MQ=73.23;MQ0=2;MQRankSum=1.825;QD=14.56;ReadPosRankSum=1.918;VQSLOD=4.2871;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,15:24:44.51:384,45,0	1/1:1,7:8:17.98:166,18,0	0/0:28,0:19:22.45:0,22,172	0/1:17,0:12:9.39:9,0,22	1/1:2,0:25:47.17:223,47,0	1/1:2,0:16:30.31:134,30,0	1/1:8,0:34:60.65:270,61,0	1/1:9,25:34:29.92:590,30,0	1/1:0,0:19:46.66:202,47,0	1/1:5,21:28:56.38:533,56,0	1/1:4,14:19:38.57:339,39,0	0/0:7,1:22:12.65:0,13,103	1/1:6,18:26:20.83:335,21,0	1/1:3,18:21:41.97:382,42,0	1/1:5,15:21:38.75:345,39,0	1/1:6,12:19:1.58:167,2,0	1/1:3,0:30:66.11:291,66,0	1/1:2,13:17:14.78:232,15,0	1/1:3,17:20:49.51:437,50,0	1/1:3,13:16:32.93:299,33,0	1/1:1,21:22:48.05:444,48,0	1/1:1,10:12:28.38:259,28,0	0/0:9,0:21:38.37:0,38,165	0/1:7,2:21:19.27:19,0,104	1/1:1,17:20:38.78:345,39,0	1/1:1,18:19:50.99:471,51,0	1/1:2,20:22:54.05:498,54,0	1/1:1,5:6:15:139,15,0
chr10	34115057	.	A	ATTACT	5417.48	PASS	AB=0.548;AC=5;AF=0.089;AN=56;BaseQRankSum=-4.880;DP=688;FS=3.805;HRun=0;HaplotypeScore=163.7157;InbreedingCoeff=0.7844;MQ=78.23;MQ0=0;MQRankSum=-10.953;QD=74.21;ReadPosRankSum=-1.069;VQSLOD=5.9880;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:63.20:0,63,1282	0/0:11,0:11:30.10:0,30,629	0/0:26,0:26:72.15:0,72,1274	0/0:20,0:19:45:0,45,838	0/0:37,0:37:99:0,108,2152	0/0:16,0:16:45.14:0,45,891	0/0:28,0:28:72.23:0,72,1471	0/0:31,0:31:78.22:0,78,1423	0/0:24,0:24:69.21:0,69,1371	0/0:23,0:23:66.22:0,66,1318	0/0:20,0:20:54.17:0,54,1095	1/1:6,21:28:81.28:2275,81,0	0/0:31,0:31:87.30:0,87,1826	0/0:28,0:28:75.24:0,75,1521	0/0:21,0:21:57.18:0,57,1130	0/0:19,0:19:45.01:0,45,906	0/0:38,0:38:99:0,105,2164	0/0:25,0:25:66.16:0,66,1286	0/0:31,0:31:87.28:0,87,1787	0/0:20,0:20:54.17:0,54,1095	0/0:30,0:30:72.21:0,72,1427	0/0:25,0:25:66.20:0,66,1298	1/1:7,19:28:75.26:2054,75,0	0/1:3,13:17:17.82:1089,0,18	0/0:20,0:20:51.16:0,51,1032	0/0:24,0:24:66.17:0,66,1306	0/0:27,0:27:72.25:0,72,1511	0/0:14,0:14:39.07:0,39,664
chr10	34116286	.	C	CCT	420.77	PASS	AB=0.569;AC=8;AF=0.143;AN=56;BaseQRankSum=-0.429;DP=521;FS=1.928;HRun=0;HaplotypeScore=92.3201;InbreedingCoeff=0.0128;MQ=67.22;MQ0=4;MQRankSum=-0.264;QD=3.97;ReadPosRankSum=-0.314;VQSLOD=2.5972;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:30:48.95:0,49,345	0/1:0,0:5:7.29:7,0,23	0/0:19,0:12:21.40:0,21,218	0/0:12,0:7:20.91:0,21,204	0/0:2,0:16:7.39:0,7,115	0/0:8,0:21:40.81:0,41,256	0/0:5,0:13:24.48:0,24,166	0/0:15,0:27:60.12:0,60,493	0/0:6,0:12:23.41:0,23,139	0/0:5,0:18:36.87:0,37,257	0/0:3,0:14:2.97:0,3,70	0/1:5,3:22:75.14:75,0,89	0/0:3,0:18:25.12:0,25,145	0/0:4,0:11:2.99:0,3,129	0/0:7,0:27:42.12:0,42,226	0/0:3,0:14:14.91:0,15,68	0/0:5,0:31:51.88:0,52,374	0/0:4,0:26:32.76:0,33,151	0/0:9,0:28:59.46:0,59,402	0/0:7,0:19:23.75:0,24,239	0/0:8,0:20:45.06:0,45,333	0/1:3,0:13:26.58:27,0,46	0/1:6,1:22:69:125,0,69	1/1:2,0:21:2.20:283,2,0	0/0:3,0:21:20.76:0,21,156	0/1:5,0:17:24.15:24,0,117	0/0:4,0:13:23.80:0,24,145	0/1:2,0:5:4.52:5,0,24
chr10	34116398	.	CT	C	2969.09	PASS	AB=0.647;AC=35;AF=0.625;AN=56;BaseQRankSum=4.739;DP=374;FS=6.118;HRun=12;HaplotypeScore=43.0591;InbreedingCoeff=0.4175;MQ=66.68;MQ0=5;MQRankSum=0.210;QD=10.68;ReadPosRankSum=1.018;VQSLOD=2.3661;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:4:6:0,6,55	1/1:1,2:3:5.97:46,6,0	0/1:12,1:9:17.23:17,0,19	0/0:13,1:10:8.71:0,9,58	0/0:17,0:18:14.17:0,14,166	0/0:16,1:18:21.69:0,22,387	0/0:10,0:10:21.04:0,21,212	1/1:7,20:28:18.79:309,19,0	0/0:7,0:8:17.99:0,18,167	1/1:2,8:10:17.40:125,17,0	1/1:5,11:15:2.40:198,2,0	1/1:1,10:11:22.74:168,23,0	1/1:3,7:10:17.91:139,18,0	1/1:4,5:9:17.90:138,18,0	1/1:2,6:7:8.95:70,9,0	1/1:2,7:10:11.95:93,12,0	0/0:21,1:23:33.50:0,34,473	0/1:4,14:18:8.08:257,0,8	0/1:9,9:18:19.49:161,0,19	0/1:2,9:11:6.56:132,0,7	0/1:5,8:12:3.55:159,0,4	0/1:3,6:9:12.52:98,0,13	1/1:4,8:11:14.90:116,15,0	1/1:2,17:19:41.82:325,42,0	0/1:7,11:18:28.04:176,0,28	1/1:11,7:17:11.96:150,12,0	1/1:3,6:8:11.94:93,12,0	1/1:4,8:13:25.93:192,26,0
chr10	34117265	.	GAT	G	4997.16	PASS	AC=40;AF=0.741;AN=54;BaseQRankSum=-0.624;DP=403;FS=1.053;HRun=0;HaplotypeScore=61.6110;InbreedingCoeff=0.9091;MQ=76.99;MQ0=3;MQRankSum=-2.975;QD=19.15;ReadPosRankSum=0.312;VQSLOD=4.6959;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:23.49:0,23,351	1/1:9,0:9:14.76:129,15,0	0/0:21,0:9:17.16:0,17,193	0/0:32,0:22:21.38:0,21,443	1/1:14,0:14:6.78:169,7,0	./.	1/1:17,0:17:41.67:292,42,0	1/1:19,0:19:57:510,57,0	0/0:8,0:8:0:0,0,0	1/1:16,0:16:44.91:404,45,0	1/1:17,0:17:44.60:369,45,0	0/0:9,0:9:23.77:0,24,178	1/1:8,0:8:17.96:151,18,0	1/1:7,0:7:20.99:181,21,0	1/1:15,0:15:41.36:349,41,0	1/1:16,0:16:32.57:274,33,0	1/1:15,0:14:30.45:219,30,0	1/1:11,0:11:23.99:207,24,0	1/1:9,0:9:26.61:200,27,0	1/1:12,0:12:32.96:278,33,0	1/1:20,0:20:38.95:325,39,0	1/1:3,10:13:0.36:1,0,0	0/0:14,0:14:35.94:0,36,295	0/0:23,0:22:53.48:0,53,420	1/1:11,0:11:30.47:261,30,0	1/1:10,0:10:26.92:230,27,0	1/1:14,0:14:35.45:261,35,0	1/1:8,0:8:23.89:189,24,0
chr10	34117266	.	ATG	A	1791.48	PASS	AB=0.898;AC=28;AF=0.500;AN=56;BaseQRankSum=-1.215;DP=385;FS=10.290;HRun=0;HaplotypeScore=69.0668;InbreedingCoeff=0.3992;MQ=79.44;MQ0=2;MQRankSum=-0.588;QD=7.28;ReadPosRankSum=-0.727;VQSLOD=2.0495;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:22:12.97:13,0,764	1/1:7,0:7:0.63:21,1,0	0/0:21,0:9:12.08:0,12,367	0/1:32,1:23:15:15,0,746	1/1:13,0:13:35.05:441,35,0	0/1:0,9:9:0:0,0,0	1/1:17,0:17:48.59:713,49,0	1/1:19,0:19:4.98:20,5,0	0/0:0,8:8:0:0,0,0	1/1:16,0:16:11.80:53,12,0	1/1:16,0:16:0.44:15,0,0	0/0:9,0:9:27.05:0,27,384	0/0:8,0:8:1.23:0,1,3	0/0:7,0:7:1.25:0,1,3	1/1:16,0:16:0.39:21,0,0	1/1:14,0:14:3.97:65,4,0	1/1:14,0:14:42.02:542,42,0	0/1:8,0:8:0.24:0,0,0	1/1:9,0:9:2.47:14,2,0	0/0:12,0:12:2.58:0,3,20	0/0:18,0:18:0.88:0,1,5	1/1:10,1:11:0.47:1,0,0	0/0:13,0:13:14.49:0,14,577	0/0:21,0:21:54.18:0,54,871	0/1:11,0:11:1.02:3,0,1	0/1:10,1:11:2.29:6,0,2	0/0:12,0:12:7.68:0,8,21	0/0:10,0:10:7.47:0,7,18
chr10	34120294	.	TA	T	1334.94	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=5.447;DP=517;FS=0.000;HRun=13;HaplotypeScore=59.5296;InbreedingCoeff=0.9521;MQ=69.42;MQ0=2;MQRankSum=1.525;QD=14.51;ReadPosRankSum=4.329;VQSLOD=4.2377;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,21:24:47.69:350,48,0	0/0:5,0:5:6:0,6,53	0/0:29,0:18:15.22:0,15,109	0/0:22,0:14:10.18:0,10,77	0/0:17,0:17:38.89:0,39,360	0/0:17,0:17:51.06:0,51,486	0/0:11,0:12:23.87:0,24,219	0/0:33,0:33:51.20:0,51,610	1/1:1,11:12:32.81:241,33,0	0/0:29,0:29:60.08:0,60,576	0/0:17,0:17:45.05:0,45,428	1/1:1,14:15:35.79:263,36,0	0/0:12,0:12:24.03:0,24,228	0/0:17,1:18:17.12:0,17,313	0/0:24,0:24:49.30:0,49,460	0/0:21,0:21:42.06:0,42,404	0/0:23,1:24:35.11:0,35,486	0/0:19,0:20:56.93:0,57,540	0/0:27,1:28:44.03:0,44,576	0/0:20,0:22:53.74:0,54,486	0/0:12,0:12:30.03:0,30,286	0/0:6,0:6:11.94:0,12,104	1/1:2,10:12:26.84:197,27,0	1/1:0,11:11:26.85:197,27,0	0/0:17,1:18:20.15:0,20,352	1/1:4,14:18:15.51:274,16,0	0/0:24,3:27:22:0,22,599	0/0:11,0:11:21.03:0,21,204
chr10	34120489	.	TGCGTCCAA	T	2261.77	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=8.433;DP=617;FS=1.549;HRun=0;HaplotypeScore=149.0680;InbreedingCoeff=0.9693;MQ=83.34;MQ0=0;MQRankSum=-8.782;QD=64.62;ReadPosRankSum=-0.766;VQSLOD=3.3492;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,33:35:84.25:2357,84,0	0/0:5,0:5:15.05:0,15,679	0/0:23,0:23:66.23:0,66,2740	0/0:14,0:14:42.14:0,42,1744	0/0:20,0:20:57.20:0,57,2546	0/0:21,0:21:63.17:0,63,2605	0/0:32,0:32:96.33:0,96,4204	0/0:29,0:29:84.28:0,84,3400	0/0:17,0:17:51.18:0,51,2273	0/0:27,0:27:81.28:0,81,3516	0/0:16,0:16:48.16:0,48,2144	0/0:23,0:23:66.21:0,66,2840	0/0:22,0:22:66.23:0,66,2895	0/0:32,0:32:96.33:0,96,4266	0/0:26,0:26:78.27:0,78,3365	0/0:17,0:17:51.18:0,51,2253	0/0:33,0:33:96.33:0,96,4242	0/0:21,0:21:63.22:0,63,2816	0/0:22,0:22:66.23:0,66,2831	0/0:19,0:19:57.20:0,57,2504	0/0:22,0:22:66.19:0,66,2711	0/0:18,0:18:54.19:0,54,2365	0/0:13,0:13:36.12:0,36,1604	0/0:31,0:31:93.32:0,93,4111	0/0:19,0:19:54.19:0,54,2352	0/0:24,0:24:72.25:0,72,3092	0/0:31,0:31:93.28:0,93,4037	0/0:5,0:5:15.05:0,15,659
chr10	34122256	.	G	GA	11033.96	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-15.433;DP=583;FS=10.546;HRun=5;HaplotypeScore=57.5195;InbreedingCoeff=0.9943;MQ=76.11;MQ0=0;MQRankSum=-0.099;QD=33.54;ReadPosRankSum=-0.242;VQSLOD=4.6050;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,102,1096	1/1:1,12:13:33.11:434,33,0	0/0:12,0:12:12.34:0,12,265	0/0:14,0:13:25.84:0,26,280	0/0:24,0:24:57.14:0,57,612	0/0:33,0:33:90.22:0,90,967	0/0:29,0:29:78.19:0,78,838	1/1:4,26:30:72.21:930,72,0	0/0:14,0:14:39.10:0,39,418	1/1:1,23:24:69.22:906,69,0	1/1:1,16:17:42.09:533,42,0	0/0:27,0:27:72.18:0,72,773	1/1:1,25:26:69.22:906,69,0	1/1:0,17:17:48.16:631,48,0	1/1:0,24:24:69.22:908,69,0	1/1:3,25:28:75.24:987,75,0	0/0:32,0:32:90.23:0,90,967	1/1:4,12:16:30.10:395,30,0	1/1:5,13:18:39.13:513,39,0	1/1:1,12:13:36.12:473,36,0	1/1:0,11:11:30.10:395,30,0	1/1:4,17:21:45.15:592,45,0	0/0:15,0:15:39.10:0,39,419	0/0:18,0:18:54.11:0,54,570	1/1:1,16:17:42.14:552,42,0	1/1:3,20:23:60.20:790,60,0	1/1:1,21:22:66.20:855,66,0	1/1:1,8:9:18.06:234,18,0
chr10	34123887	.	AT	A	15324.65	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-2.906;DP=649;FS=15.481;HRun=8;HaplotypeScore=85.9460;InbreedingCoeff=0.9984;MQ=80.54;MQ0=0;MQRankSum=-7.748;QD=24.80;ReadPosRankSum=5.279;VQSLOD=3.8235;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,38:45:99:956,99,0	1/1:2,11:13:33.05:319,33,0	0/0:18,0:18:26.11:0,26,467	0/0:13,0:13:25.84:0,26,284	1/1:2,26:28:66.09:637,66,0	1/1:2,15:17:42.07:406,42,0	1/1:2,15:17:39.06:377,39,0	1/1:6,22:28:63.08:603,63,0	1/1:2,17:19:48.07:464,48,0	1/1:3,25:28:77.78:731,78,0	1/1:1,26:27:72.11:695,72,0	1/1:1,20:21:60.10:579,60,0	1/1:1,16:17:45.07:434,45,0	1/1:2,21:23:59.38:578,59,0	1/1:3,22:25:66.10:637,66,0	1/1:1,27:28:78.12:753,78,0	1/1:1,27:28:78.12:753,78,0	1/1:0,26:26:78.13:753,78,0	1/1:4,15:19:45.07:435,45,0	1/1:2,33:35:87.13:840,87,0	1/1:2,16:18:45.07:435,45,0	1/1:1,21:22:57.09:550,57,0	1/1:2,21:22:57.09:550,57,0	1/1:2,22:24:51.08:492,51,0	1/1:1,21:22:57.09:550,57,0	1/1:0,28:28:84.14:811,84,0	1/1:1,23:24:66.10:637,66,0	1/1:1,12:13:36.06:348,36,0
chr10	34124980	.	CT	C	20820.09	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-1.533;DP=597;FS=0.000;HRun=2;HaplotypeScore=121.5138;InbreedingCoeff=0.9684;MQ=76.32;MQ0=0;MQRankSum=-6.784;QD=36.40;ReadPosRankSum=4.546;VQSLOD=4.2678;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,41:43:99:1470,114,0	1/1:1,11:12:33.11:428,33,0	0/0:11,0:12:18.78:0,19,281	0/0:11,1:13:9.56:0,10,243	1/1:0,17:17:48.16:623,48,0	1/1:0,14:14:36.12:467,36,0	1/1:0,27:27:72.23:935,72,0	1/1:0,19:19:57.19:740,57,0	1/1:0,27:27:78.25:1013,78,0	1/1:1,19:20:57.19:740,57,0	1/1:0,11:11:30.09:379,30,0	1/1:0,30:30:78.25:1013,78,0	1/1:0,22:22:63.20:818,63,0	1/1:1,24:25:72.23:935,72,0	1/1:0,28:28:78.25:1013,78,0	1/1:1,19:20:51.17:662,51,0	1/1:1,37:38:99:1402,108,0	1/1:1,25:26:69.22:896,69,0	1/1:0,20:20:60.17:761,60,0	1/1:0,17:17:48.16:623,48,0	1/1:0,27:27:75.24:974,75,0	1/1:2,16:18:51.17:660,51,0	1/1:0,16:16:48.16:623,48,0	1/1:0,17:17:51.17:662,51,0	1/1:0,16:16:48.16:623,48,0	1/1:0,26:26:75.21:956,75,0	1/1:0,20:20:60.20:779,60,0	1/1:0,16:16:48.16:623,48,0
chr10	34124997	.	A	AT	1177.22	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-0.676;DP=595;FS=0.000;HRun=4;HaplotypeScore=201.6241;InbreedingCoeff=0.9941;MQ=74.08;MQ0=0;MQRankSum=-7.469;QD=28.03;ReadPosRankSum=-1.840;VQSLOD=1.5113;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,36:42:99:1272,99,0	0/0:12,0:12:36.10:0,36,408	0/0:10,0:10:24.07:0,24,272	0/0:12,0:12:30.09:0,30,340	0/0:16,0:16:42.12:0,42,476	0/0:11,0:11:27.08:0,27,306	0/0:23,0:23:63.18:0,63,715	0/0:25,0:25:63.16:0,63,704	0/0:28,0:28:81.23:0,81,918	0/0:21,0:21:60.13:0,60,660	0/0:8,0:8:24.07:0,24,272	0/0:32,0:32:75.20:0,75,850	0/0:24,0:24:69.18:0,69,773	0/0:24,0:24:63.18:0,63,715	0/0:24,0:24:66.19:0,66,749	0/0:19,0:19:54.15:0,54,613	0/0:42,0:42:99:0,117,1315	0/0:28,0:28:66.19:0,66,749	0/0:18,0:18:51.14:0,51,579	0/0:13,0:13:36.10:0,36,408	0/0:27,0:27:66.17:0,66,738	0/0:19,0:19:54.11:0,54,599	0/0:17,0:17:45.13:0,45,510	0/0:16,0:16:45.13:0,45,511	0/0:23,0:23:54.15:0,54,613	0/0:25,0:25:66.19:0,66,747	0/0:18,0:18:54.15:0,54,612	0/0:18,0:18:54.15:0,54,613
chr10	34125442	.	C	CA	9171.02	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-13.057;DP=557;FS=22.026;HRun=8;HaplotypeScore=51.6392;InbreedingCoeff=0.9928;MQ=79.64;MQ0=0;MQRankSum=-0.609;QD=29.21;ReadPosRankSum=0.067;VQSLOD=3.1392;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,105,961	1/1:0,5:5:15.04:173,15,0	0/0:9,0:9:14.96:0,15,121	0/0:20,0:20:40.97:0,41,307	0/0:22,0:22:66.04:0,66,604	0/0:25,0:25:69.04:0,69,631	0/0:28,0:28:75.04:0,75,686	1/1:10,25:35:50.76:838,51,0	0/0:20,0:20:57:0,57,511	1/1:2,22:24:66.20:762,66,0	1/1:3,13:16:36.11:416,36,0	0/0:10,0:10:30:0,30,270	1/1:1,15:16:48.14:551,48,0	1/1:1,15:17:48.12:542,48,0	1/1:4,18:22:29.66:581,30,0	1/1:1,17:18:45.13:519,45,0	0/0:34,0:34:90.03:0,90,823	1/1:1,17:18:45.13:519,45,0	1/1:4,17:21:51.14:578,51,0	1/1:3,19:22:54.08:594,54,0	1/1:0,27:27:81.24:935,81,0	1/1:2,10:12:27.08:309,27,0	0/0:20,0:20:51.02:0,51,467	0/0:16,0:16:45.02:0,45,412	1/1:1,18:19:48.10:539,48,0	1/1:0,12:12:36.11:415,36,0	1/1:3,22:25:63.19:727,63,0	1/1:0,5:5:15.04:173,15,0
chr10	34125599	.	G	GTTT	8288.69	PASS	AB=0.725;AC=48;AF=0.857;AN=56;BaseQRankSum=-5.022;DP=474;FS=6.589;HRun=12;HaplotypeScore=78.6652;InbreedingCoeff=0.1852;MQ=70.79;MQ0=1;MQRankSum=0.196;QD=18.22;ReadPosRankSum=-1.037;VQSLOD=3.2456;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:3,0:19:40.93:0,41,243	1/1:0,8:9:21.03:347,21,0	0/1:18,0:11:4.28:4,0,97	0/1:9,0:8:10.17:10,0,52	0/1:7,0:22:25.70:48,0,26	0/1:4,0:17:15.08:32,0,15	0/1:4,0:11:22.09:22,0,23	1/1:11,13:24:35.22:428,35,0	1/1:2,0:13:7.48:17,7,0	1/1:7,12:23:54.04:654,54,0	1/1:3,13:17:41.91:564,42,0	1/1:3,6:12:12:156,12,0	1/1:5,12:17:18.06:314,18,0	1/1:3,9:14:18.04:283,18,0	1/1:3,10:18:30.03:428,30,0	1/1:6,5:12:30:410,30,0	1/1:8,0:24:36.63:185,37,0	1/1:4,11:17:15.58:262,16,0	1/1:5,14:21:51.01:729,51,0	1/1:3,13:17:40.29:530,40,0	1/1:5,6:11:5.98:75,6,0	0/1:3,5:11:9.64:260,0,10	1/1:7,0:13:11.77:111,12,0	1/1:4,0:19:19:140,19,0	1/1:4,20:25:36.10:592,36,0	1/1:5,18:26:66.01:832,66,0	1/1:5,12:19:22.32:363,22,0	1/1:1,9:14:30.08:494,30,0
chr10	34125759	.	G	GC	2013.56	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-7.458;DP=431;FS=4.344;HRun=8;HaplotypeScore=48.3519;InbreedingCoeff=0.9537;MQ=87.65;MQ0=0;MQRankSum=-1.410;QD=23.41;ReadPosRankSum=1.215;VQSLOD=4.3012;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:26.98:0,27,247	0/0:5,0:5:11.99:0,12,105	0/0:22,0:22:39.62:0,40,337	0/0:14,0:14:3.94:0,4,168	1/1:3,22:25:51.15:589,51,0	1/1:3,14:17:36.11:416,36,0	1/1:1,12:13:33.10:381,33,0	0/0:19,0:19:39.01:0,39,357	1/1:2,10:12:24.05:264,24,0	0/0:9,0:9:21:0,21,192	0/0:20,0:20:45:0,45,407	0/0:11,0:11:20.98:0,21,192	0/0:16,0:16:35.97:0,36,325	0/0:12,0:12:33.01:0,33,302	0/0:19,0:19:44.96:0,45,400	0/0:16,0:15:39:0,39,351	1/1:2,16:19:48.10:539,48,0	0/0:21,0:23:61.09:0,61,531	0/0:15,0:15:27:0,27,247	0/0:14,0:14:33.01:0,33,302	0/0:16,0:16:38.95:0,39,344	0/0:10,0:10:21:0,21,192	0/0:11,0:11:27.01:0,27,247	0/0:14,0:14:39.01:0,39,357	0/0:17,0:17:36.01:0,36,329	0/0:24,0:24:57.01:0,57,520	0/0:13,0:13:33.01:0,33,301	0/0:7,0:7:21.01:0,21,192
chr10	34126026	.	AATCT	A	3476.97	PASS	AB=0.925;AC=29;AF=0.580;AN=50;BaseQRankSum=0.319;DP=542;FS=4.514;HRun=0;HaplotypeScore=102.7056;InbreedingCoeff=0.5310;MQ=59.93;MQ0=6;MQRankSum=0.995;QD=11.33;ReadPosRankSum=-1.322;VQSLOD=2.6412;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:25:14.46:17,0,14	1/1:3,0:3:3.01:45,3,0	./.	./.	0/0:23,0:22:33.11:0,33,617	0/0:26,0:25:36.12:0,36,651	0/0:13,0:13:18.04:0,18,265	./.	0/0:12,0:12:9.03:0,9,171	0/0:25,0:25:36.12:0,36,788	0/0:20,0:20:36.11:0,36,725	0/1:18,0:18:27.94:136,0,28	1/1:10,6:16:24.08:364,24,0	1/1:13,9:22:18.06:273,18,0	1/1:6,14:20:30.10:454,30,0	1/1:13,12:25:27.09:409,27,0	0/0:27,0:27:36.05:0,36,577	1/1:21,0:21:8.93:66,9,0	1/1:14,3:16:9.02:114,9,0	0/0:16,0:16:15.04:0,15,303	1/1:8,6:14:12.04:182,12,0	1/1:10,5:15:12:156,12,0	1/1:14,0:14:9.03:103,9,0	0/1:19,0:19:4.27:145,0,4	0/1:15,1:17:30.44:30,0,113	1/1:12,11:23:33.10:475,33,0	0/1:15,13:27:22.83:371,0,23	1/1:5,5:10:9.03:136,9,0
chr10	34126082	.	TATCA	T	1401.39	PASS	AB=1.000;AC=18;AF=0.321;AN=56;BaseQRankSum=10.885;DP=497;FS=2.049;HRun=0;HaplotypeScore=95.6629;InbreedingCoeff=-0.0047;MQ=61.35;MQ0=6;MQRankSum=0.964;QD=5.77;ReadPosRankSum=3.056;VQSLOD=1.8791;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:21.20:0,21,319	0/1:3,0:3:11.49:11,0,45	0/0:20,0:12:33.06:0,33,365	0/0:15,0:11:23.20:0,23,281	0/0:17,0:17:51.11:0,51,829	0/0:19,0:19:57.12:0,57,891	0/0:16,0:16:45.01:0,45,489	0/0:22,0:22:62.95:0,63,564	0/0:7,0:7:21.04:0,21,325	0/0:25,0:25:72.18:0,72,1329	0/0:24,0:24:68.92:0,69,1039	1/1:2,15:17:15.05:283,15,0	0/1:14,0:14:75.23:130,0,75	0/1:17,0:17:77.04:77,0,156	0/1:25,0:24:99:133,0,167	0/1:19,0:19:99:125,0,121	0/0:34,0:34:86.97:0,87,1074	0/0:12,0:12:5.43:0,5,188	0/1:13,0:11:10.99:11,0,195	0/0:17,0:17:47.92:0,48,619	0/1:15,0:15:39.03:39,0,193	0/1:7,0:7:35.12:45,0,35	1/1:0,9:9:9.03:169,9,0	1/1:2,24:26:15.05:283,15,0	0/1:14,0:14:13.46:13,0,256	0/1:23,0:23:99:114,0,239	0/1:31,0:30:99:104,0,356	0/1:10,0:10:38.49:38,0,103
chr10	34127487	.	G	GCAAA	32662.67	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-12.193;DP=725;FS=7.754;HRun=0;HaplotypeScore=84.0034;InbreedingCoeff=0.9962;MQ=77.22;MQ0=0;MQRankSum=-5.644;QD=51.60;ReadPosRankSum=3.689;VQSLOD=5.8551;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,108,1826	1/1:0,7:7:20.99:479,21,0	0/0:29,0:29:60.16:0,60,876	0/0:23,0:23:46.35:0,46,707	1/1:3,25:28:66.11:1446,66,0	1/1:5,27:32:57.20:1445,57,0	1/1:1,25:26:45.15:1155,45,0	1/1:5,25:31:78.17:1482,78,0	1/1:1,28:30:63.22:1606,63,0	1/1:3,22:27:72.16:1522,72,0	1/1:4,20:24:53.97:1205,54,0	1/1:6,29:36:57.20:1443,57,0	1/1:2,21:23:45.15:1156,45,0	1/1:4,23:27:54.19:1387,54,0	1/1:5,21:27:42.14:1079,42,0	1/1:1,34:35:78.27:1986,78,0	1/1:1,21:22:48.16:1232,48,0	1/1:5,12:17:24.08:615,24,0	1/1:1,20:22:63.13:1220,63,0	1/1:4,34:38:96.29:2407,96,0	1/1:2,23:27:63.21:1556,63,0	1/1:2,14:16:42.09:977,42,0	1/1:5,21:27:51.17:1262,51,0	1/1:2,19:21:39.13:1002,39,0	1/1:0,14:14:21.07:539,21,0	1/1:1,20:22:60.17:1347,60,0	1/1:2,33:36:90.31:2265,90,0	1/1:0,16:16:33.11:847,33,0
chr10	34129268	.	AG	A	2864.29	PASS	AB=0.935;AC=19;AF=0.339;AN=56;BaseQRankSum=-3.891;DP=470;FS=14.618;HRun=10;HaplotypeScore=89.6364;InbreedingCoeff=0.6333;MQ=65.14;MQ0=0;MQRankSum=1.833;QD=11.60;ReadPosRankSum=2.747;VQSLOD=1.6345;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:18,4:22:94.18:94,0,187	0/0:2,0:4:2.84:0,3,14	0/1:28,0:22:40.97:41,0,201	0/1:23,1:21:62.52:63,0,111	1/1:4,7:13:23.02:187,23,0	1/1:4,14:18:41.99:364,42,0	1/1:4,18:23:44.02:370,44,0	0/0:5,0:10:11.36:0,11,57	1/1:6,6:13:26.01:214,26,0	0/0:10,0:12:11.82:0,12,100	0/0:4,0:9:8.69:0,9,62	1/1:15,16:32:28.53:463,29,0	0/0:5,0:7:2.92:0,3,17	0/0:5,0:12:23.06:0,23,151	0/0:14,0:23:32.03:0,32,217	0/0:9,0:19:22.90:0,23,134	1/1:10,21:31:68.96:598,69,0	0/0:10,0:19:26.16:0,26,179	0/0:9,0:9:5.97:0,6,48	0/0:11,0:17:20.60:0,21,154	0/0:10,0:17:8.67:0,9,52	0/0:9,0:10:11.74:0,12,105	1/1:6,7:15:23.03:189,23,0	1/1:5,20:27:58.05:481,58,0	0/0:10,0:12:2.84:0,3,14	0/0:13,0:17:22.82:0,23,136	0/0:5,0:12:11.53:0,12,76	0/0:7,0:13:11.66:0,12,81
chr10	34129813	.	G	GA	9427.04	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-16.395;DP=676;FS=1.801;HRun=10;HaplotypeScore=79.9796;InbreedingCoeff=0.9990;MQ=74.26;MQ0=0;MQRankSum=-1.473;QD=23.45;ReadPosRankSum=1.048;VQSLOD=5.4670;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,120,967	1/1:1,14:16:41.94:430,42,0	0/0:23,0:23:31.47:0,31,261	0/0:21,0:18:43.56:0,44,305	0/0:8,0:38:59.06:0,59,171	0/0:5,0:24:34.62:0,35,100	0/0:4,0:24:36.66:0,37,106	1/1:10,20:30:37.50:577,38,0	0/0:0,0:12:22.41:0,22,65	1/1:8,14:22:32.18:407,32,0	1/1:5,15:20:42.07:435,42,0	0/0:25,0:25:59.91:0,60,492	1/1:4,18:22:45.11:480,45,0	1/1:4,17:21:29.49:519,29,0	1/1:6,22:28:35.51:583,36,0	1/1:3,28:33:62.11:836,62,0	0/0:1,0:23:44.82:0,45,130	1/1:3,21:25:48.53:637,49,0	1/1:11,17:29:59.97:613,60,0	1/1:4,20:24:38.48:602,38,0	1/1:1,12:13:30.08:320,30,0	1/1:4,21:25:41.51:639,42,0	0/0:22,0:22:56.93:0,57,468	0/0:17,0:17:41.94:0,42,345	1/1:3,12:15:33.08:352,33,0	1/1:5,30:36:48.77:886,49,0	1/1:4,26:29:78.18:823,78,0	1/1:2,11:13:27.07:288,27,0
chr10	34131637	.	ATGTGTG	A	2686.75	PASS	AB=0.791;AC=37;AF=0.712;AN=52;BaseQRankSum=3.375;DP=666;FS=3.961;HRun=0;HaplotypeScore=155.5251;InbreedingCoeff=0.4072;MQ=67.04;MQ0=11;MQRankSum=-6.186;QD=5.79;ReadPosRankSum=1.877;VQSLOD=2.6060;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:21.04:0,21,593	1/1:5,5:10:6:83,6,0	./.	0/0:40,0:26:0:0,0,0	1/1:8,0:15:3.01:40,3,0	1/1:3,0:15:15.05:209,15,0	1/1:10,0:20:3.01:42,3,0	1/1:29,0:27:1.20:16,1,0	1/1:7,0:24:20.86:286,21,0	0/1:16,2:25:93.81:105,0,94	0/0:15,1:16:5.03:0,5,32	0/0:18,0:25:27.01:0,27,354	1/1:16,8:26:8.98:118,9,0	1/1:11,7:19:11.96:242,12,0	1/1:18,19:38:26.01:459,26,0	1/1:23,13:37:15.94:293,16,0	1/1:8,0:20:6.02:84,6,0	0/1:12,4:16:51.49:51,0,93	./.	1/1:17,4:21:3.84:62,4,0	0/1:33,7:38:15.99:48,0,16	1/1:14,10:24:3.01:37,3,0	0/0:11,0:15:6:0,6,62	0/0:19,1:29:29.76:0,30,390	1/1:12,12:24:6.02:98,6,0	1/1:22,2:25:6.59:157,7,0	1/1:18,5:22:9.03:180,9,0	1/1:7,3:10:12.04:238,12,0
chr10	34131830	.	A	AT	3545.72	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-10.198;DP=809;FS=0.000;HRun=8;HaplotypeScore=173.3873;InbreedingCoeff=0.9989;MQ=71.38;MQ0=0;MQRankSum=-0.219;QD=29.06;ReadPosRankSum=0.551;VQSLOD=1.3622;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,147,1338	0/0:13,0:13:36:0,36,324	0/0:20,0:20:31.96:0,32,378	0/0:14,0:14:21:0,21,191	1/1:0,32:32:90.23:1024,90,0	1/1:2,19:21:54.59:606,55,0	1/1:2,24:26:69.21:796,69,0	0/0:42,0:42:99:0,117,1059	1/1:8,17:25:57.16:648,57,0	0/0:33,0:33:80.95:0,81,741	0/0:22,0:22:50.96:0,51,456	0/0:25,0:25:63.01:0,63,576	0/0:34,0:34:96.05:0,96,876	0/0:22,0:22:63.02:0,63,576	0/0:45,0:45:99:0,129,1180	0/0:47,0:47:99:0,135,1219	1/1:0,18:18:42.09:471,42,0	0/0:15,0:15:42.02:0,42,384	0/0:15,0:15:41.99:0,42,384	0/0:28,0:28:71.98:0,72,654	0/0:53,0:53:99:0,150,1367	0/0:26,0:26:75.02:0,75,681	0/0:23,0:23:49.89:0,50,460	0/0:39,0:39:98.96:0,99,892	0/0:33,0:33:96.05:0,96,878	0/0:41,0:41:99:0,111,1012	0/0:23,0:22:60:0,60,544	0/0:22,0:22:66.04:0,66,604
chr10	34136282	.	A	ATT	4150.30	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-9.821;DP=589;FS=1.405;HRun=7;HaplotypeScore=70.4273;InbreedingCoeff=0.9597;MQ=70.02;MQ0=2;MQRankSum=-0.898;QD=38.79;ReadPosRankSum=2.225;VQSLOD=3.4348;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:84.08:0,84,941	0/0:17,0:17:48.14:0,48,559	0/0:25,0:21:36.31:0,36,363	0/0:12,0:8:3.23:0,3,45	1/1:2,16:19:47.52:728,48,0	1/1:0,17:17:36.12:591,36,0	1/1:2,12:14:36.12:574,36,0	0/0:31,0:31:75.21:0,75,866	1/1:1,20:20:48.16:787,48,0	0/0:27,0:27:75.22:0,75,874	0/0:27,0:27:75.22:0,75,874	0/0:25,0:25:63.16:0,63,723	0/0:15,0:15:39.11:0,39,455	0/0:16,0:16:48.14:0,48,559	0/0:14,0:14:39.11:0,39,454	0/0:23,0:23:66.18:0,66,758	1/1:1,35:36:90.31:1471,90,0	0/0:22,0:22:60.17:0,60,699	0/0:24,0:23:63.19:0,63,733	0/0:27,0:27:69.19:0,69,804	0/0:8,0:8:18.05:0,18,210	0/0:16,0:16:39.10:0,39,454	0/0:24,0:24:65.79:0,66,746	0/0:14,0:14:39.11:0,39,454	0/0:19,0:19:45.13:0,45,524	0/0:26,0:26:69.18:0,69,794	0/0:25,0:25:72.19:0,72,828	0/0:14,0:14:30.09:0,30,349
chr10	34136807	.	TACACAC	T	1723.44	PASS	AB=0.871;AC=40;AF=0.800;AN=50;BaseQRankSum=3.140;DP=512;FS=9.913;HRun=0;HaplotypeScore=101.7280;InbreedingCoeff=0.2253;MQ=58.25;MQ0=17;MQRankSum=-3.533;QD=4.57;ReadPosRankSum=-1.303;VQSLOD=1.2750;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:38:6.49:0,6,182	1/1:4,1:5:3.01:60,3,0	./.	./.	1/1:10,0:17:5.39:59,5,0	1/1:7,0:14:6.02:84,6,0	1/1:19,0:24:2.84:14,3,0	./.	1/1:16,0:19:3.01:42,3,0	1/1:18,1:21:8.33:129,8,0	0/1:9,4:14:0:0,0,0	0/0:11,0:11:13.03:0,13,80	1/1:11,6:16:12.04:241,12,0	1/1:8,1:13:15.03:190,15,0	1/1:21,3:24:6.02:120,6,0	1/1:25,14:39:6.64:405,7,0	1/1:16,0:17:5.99:63,6,0	1/1:15,0:21:0.65:38,1,0	1/1:14,3:17:6.01:87,6,0	1/1:7,0:7:3:27,3,0	1/1:16,3:18:0.47:1,0,0	0/1:11,3:14:41.71:54,0,42	1/1:10,0:18:1.77:4,2,0	0/0:17,0:20:3.20:0,3,75	0/1:11,0:12:16.98:91,0,17	0/1:13,0:13:2.03:22,0,2	1/1:14,9:23:3.01:60,3,0	1/1:3,2:4:3.01:60,3,0
chr10	34138111	.	AGG	A	2691.99	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=1.281;DP=578;FS=6.547;HRun=11;HaplotypeScore=112.6046;InbreedingCoeff=0.9679;MQ=82.64;MQ0=0;MQRankSum=-0.449;QD=13.95;ReadPosRankSum=4.814;VQSLOD=1.9161;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:9,0:27:19.66:93,20,0	0/0:3,0:3:6.02:0,6,69	0/0:20,0:19:25.18:0,25,270	0/0:21,0:20:16.08:0,16,263	1/1:6,14:22:41.57:407,42,0	1/1:3,13:17:41.84:427,42,0	1/1:3,17:20:42.08:447,42,0	0/0:22,0:22:17.63:0,18,194	1/1:2,15:17:39.04:415,39,0	0/0:29,0:29:47.14:0,47,511	0/0:13,0:13:33.10:0,33,381	1/1:4,0:26:52.12:227,52,0	0/0:17,0:17:35.28:0,35,387	0/0:14,0:17:11.90:0,12,258	0/0:29,0:30:74.40:0,74,813	0/0:19,1:21:18.14:0,18,486	1/1:3,21:24:51.12:543,51,0	0/0:22,0:22:57.13:0,57,644	0/0:18,0:22:13.46:0,13,306	0/0:21,0:21:45.13:0,45,509	0/0:29,0:30:73.42:0,73,850	0/0:16,0:17:16.90:0,17,266	1/1:3,0:19:35.42:155,35,0	1/1:3,0:21:43.91:191,44,0	0/0:18,0:18:41.90:0,42,414	0/0:18,0:18:33.08:0,33,353	0/0:27,0:28:72.13:0,72,837	0/0:14,0:14:32.99:0,33,315
chr10	34138847	.	AC	A	12949.45	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=13.109;DP=626;FS=6.804;HRun=4;HaplotypeScore=64.9824;InbreedingCoeff=0.9993;MQ=83.88;MQ0=0;MQRankSum=-3.123;QD=32.21;ReadPosRankSum=2.942;VQSLOD=5.5433;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,39:42:99:1296,108,0	1/1:0,14:14:33.10:396,33,0	0/0:16,0:15:42.03:0,42,547	0/0:22,0:22:54.17:0,54,717	0/0:15,0:15:45.15:0,45,630	0/0:32,0:32:96.31:0,96,1325	0/0:24,0:24:72.21:0,72,973	1/1:2,28:30:87.27:1042,87,0	0/0:26,0:26:75.24:0,75,1027	1/1:1,17:18:48.15:576,48,0	1/1:2,13:15:39.10:454,39,0	0/0:22,0:22:60.18:0,60,804	1/1:1,15:16:42.13:504,42,0	1/1:1,23:24:63.19:756,63,0	1/1:2,20:22:60.18:720,60,0	1/1:2,28:30:39.23:894,39,0	0/0:31,0:31:87.26:0,87,1198	1/1:1,28:29:81.25:972,81,0	1/1:2,17:19:51.15:609,51,0	1/1:1,16:17:48.15:576,48,0	1/1:0,30:30:87.27:1043,87,0	1/1:0,17:17:47.98:557,48,0	0/0:16,0:16:48.16:0,48,670	0/0:20,0:20:54.18:0,54,754	1/1:1,16:17:48.15:576,48,0	1/1:1,22:23:66.20:792,66,0	1/1:1,27:28:78.24:936,78,0	1/1:0,11:11:21.06:252,21,0
chr10	34139295	.	AT	A	9366.30	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=14.542;DP=565;FS=6.596;HRun=8;HaplotypeScore=59.2229;InbreedingCoeff=0.9834;MQ=69.75;MQ0=0;MQRankSum=-0.190;QD=25.18;ReadPosRankSum=0.776;VQSLOD=5.6118;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:51.16:0,51,616	1/1:1,7:8:21.03:203,21,0	0/0:7,0:7:14.93:0,15,151	0/0:5,0:5:6.69:0,7,105	0/0:35,0:35:84.24:0,84,993	0/0:23,0:23:63.18:0,63,750	0/0:17,0:17:51.16:0,51,616	1/1:3,30:33:90.14:869,90,0	0/0:20,0:20:54.15:0,54,639	1/1:2,21:23:63.08:603,63,0	1/1:1,25:26:66.10:637,66,0	0/0:17,0:17:48.13:0,48,568	1/1:1,25:26:75.12:724,75,0	1/1:2,20:22:60.09:579,60,0	1/1:0,26:26:78.13:753,78,0	1/1:1,21:22:57.09:551,57,0	0/0:23,0:23:69.21:0,69,833	1/1:2,22:24:66.10:637,66,0	1/1:3,13:16:39.02:362,39,0	1/1:1,29:30:78.12:753,78,0	1/1:2,11:13:30.05:290,30,0	1/1:2,12:14:30.04:290,30,0	0/0:17,0:17:45.13:0,45,533	0/0:9,0:9:24.07:0,24,290	1/1:1,28:29:78.13:753,78,0	1/1:2,19:21:57.09:550,57,0	1/1:6,19:25:48.06:464,48,0	1/1:0,14:14:36.06:348,36,0
chr10	34139493	.	G	GA	11167.82	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-15.084;DP=596;FS=6.338;HRun=8;HaplotypeScore=53.6164;InbreedingCoeff=0.9701;MQ=76.03;MQ0=0;MQRankSum=-2.237;QD=28.64;ReadPosRankSum=1.511;VQSLOD=5.3678;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,18:20:48.14:554,48,0	1/1:0,11:11:33.10:381,33,0	0/0:16,0:17:33.45:0,33,296	0/0:9,0:9:21:0,21,189	0/0:28,0:28:77.15:0,77,707	0/0:26,0:26:72.04:0,72,659	0/0:21,0:21:57.02:0,57,522	1/1:7,26:34:81.54:916,82,0	0/0:23,0:23:57.02:0,57,517	1/1:0,18:18:54.15:614,54,0	1/1:5,17:22:47.22:563,47,0	0/0:20,0:20:51.03:0,51,467	1/1:2,25:27:69.21:796,69,0	1/1:4,30:34:65.81:1011,66,0	1/1:5,18:23:48.14:554,48,0	1/1:2,24:26:66.20:762,66,0	0/0:29,0:29:53.27:0,53,637	1/1:5,25:30:72.21:829,72,0	1/1:4,18:22:2.21:522,2,0	1/1:2,22:24:41.74:732,42,0	1/1:4,7:11:27.07:302,27,0	1/1:0,17:17:48.14:554,48,0	0/0:11,0:11:33.02:0,33,302	0/0:22,0:22:63.03:0,63,577	1/1:1,13:14:36.11:416,36,0	1/1:3,14:17:42.12:483,42,0	1/1:4,21:25:61.06:694,61,0	1/1:1,14:15:42.12:485,42,0
chr10	34139658	.	A	AT	9570.37	PASS	AB=0.545;AC=33;AF=0.589;AN=56;BaseQRankSum=-14.473;DP=556;FS=14.954;HRun=9;HaplotypeScore=52.8764;InbreedingCoeff=0.9180;MQ=78.66;MQ0=0;MQRankSum=-1.251;QD=27.98;ReadPosRankSum=-0.074;VQSLOD=3.6222;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:56.96:0,57,495	1/1:2,11:13:10.04:339,10,0	0/0:17,0:18:29.51:0,30,247	0/0:13,0:13:2.73:0,3,224	0/0:28,0:28:83.97:0,84,725	0/0:26,0:26:68.94:0,69,590	0/0:16,0:16:38.98:0,39,339	1/1:8,28:36:61.16:893,61,0	0/0:25,0:26:68.01:0,68,579	1/1:4,16:21:50.95:536,51,0	1/1:1,27:28:69.19:763,69,0	0/0:19,0:19:47.97:0,48,413	1/1:1,15:16:45.06:497,45,0	1/1:0,22:22:60.16:664,60,0	1/1:2,20:22:54.15:597,54,0	0/1:3,15:18:0.98:440,0,1	0/0:15,0:15:41.98:0,42,365	1/1:4,21:25:60.16:664,60,0	1/1:1,22:23:66.18:729,66,0	1/1:3,28:31:87.19:947,87,0	1/1:0,5:5:15.04:166,15,0	1/1:2,15:17:39.11:431,39,0	0/0:20,0:20:59.99:0,60,521	0/0:8,0:8:17.99:0,18,156	1/1:1,19:20:57.15:631,57,0	1/1:1,24:26:48.98:742,49,0	1/1:2,12:14:36.10:398,36,0	1/1:0,5:5:12.03:133,12,0
chr10	34141282	.	TGC	T	16743.89	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=14.791;DP=679;FS=8.383;HRun=0;HaplotypeScore=87.2597;InbreedingCoeff=0.9629;MQ=71.33;MQ0=3;MQRankSum=-0.778;QD=36.88;ReadPosRankSum=1.903;VQSLOD=7.1102;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,44:45:99:1634,114,0	1/1:0,10:10:24.08:344,24,0	0/0:10,0:10:0.88:0,1,245	0/0:7,0:8:19.74:0,20,208	0/0:24,0:24:69.20:0,69,1218	0/0:25,0:25:75.22:0,75,1310	0/0:27,0:27:75.26:0,75,1360	1/1:1,18:19:54.17:754,54,0	0/0:18,0:18:51.12:0,51,845	1/1:4,20:23:60.18:841,60,0	1/1:2,11:13:33.11:473,33,0	0/0:37,0:37:99:0,105,1837	1/1:1,18:19:51.17:731,51,0	1/1:0,28:27:72.24:1032,72,0	1/1:1,37:38:90.30:1290,90,0	1/1:1,23:24:63.21:903,63,0	0/0:29,0:29:81.28:0,81,1484	1/1:2,17:19:42.14:602,42,0	1/1:0,19:19:57.19:814,57,0	1/1:0,27:26:69.23:988,69,0	1/1:2,54:56:99:2020,141,0	1/1:0,23:23:63.21:903,63,0	0/0:20,0:20:54.19:0,54,988	0/0:27,0:27:78.27:0,78,1404	1/1:2,15:17:42.14:602,42,0	1/1:2,30:32:90.28:1267,90,0	1/1:0,34:34:87.29:1247,87,0	1/1:0,7:7:21.07:301,21,0
chr10	34142315	.	AAAAAAT	A	45.80	PASS	AC=2;AF=0.042;AN=48;BaseQRankSum=2.610;DP=235;FS=2.590;HRun=0;HaplotypeScore=42.8425;InbreedingCoeff=0.2155;MQ=57.31;MQ0=8;MQRankSum=-0.709;QD=6.54;ReadPosRankSum=-0.567;VQSLOD=1.4097;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:0,7:7:6.02:124,6,0	0/0:1,0:1:3.01:0,3,101	0/0:23,0:8:11.50:0,12,183	0/0:51,0:6:10.06:0,10,129	0/0:4,0:4:9.03:0,9,304	0/0:6,0:6:15.05:0,15,494	0/0:3,0:3:9.03:0,9,233	0/0:38,0:38:90.78:0,91,2401	0/0:3,0:3:3.01:0,3,74	0/0:2,0:2:3.01:0,3,101	0/0:4,0:4:12.04:0,12,364	0/0:2,0:2:6.02:0,6,203	./.	0/0:1,0:1:3.01:0,3,101	0/0:3,0:3:6.02:0,6,202	0/0:4,0:4:12.04:0,12,269	0/0:27,0:27:78.27:0,78,2545	0/0:19,0:19:48.12:0,48,1480	0/0:8,0:7:9.03:0,9,284	0/0:2,0:2:3.01:0,3,101	0/0:1,0:1:3.01:0,3,67	./.	./.	./.	0/0:7,0:7:18.06:0,18,592	0/0:1,0:1:3.01:0,3,78	0/0:4,0:4:9.03:0,9,304	0/0:14,0:14:42.14:0,42,1339
chr10	34142454	.	C	CTG	1379.33	PASS	AB=0.860;AC=40;AF=0.870;AN=46;BaseQRankSum=0.016;DP=453;FS=8.653;HRun=0;HaplotypeScore=78.6442;InbreedingCoeff=0.1291;MQ=65.75;MQ0=11;MQRankSum=-1.453;QD=3.67;ReadPosRankSum=0.359;VQSLOD=1.2632;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:19,9:29:18.65:119,0,19	./.	./.	0/1:38,0:16:0:0,0,0	./.	1/1:8,0:18:3:26,3,0	1/1:21,0:21:8.94:69,9,0	1/1:29,0:29:14.58:97,15,0	1/1:4,0:10:3:26,3,0	1/1:7,0:7:0.47:1,0,0	./.	1/1:5,1:6:8.19:71,8,0	1/1:11,0:10:5.95:61,6,0	1/1:14,0:14:11.85:103,12,0	1/1:16,0:15:8.48:68,8,0	1/1:18,0:18:11.52:133,12,0	1/1:17,0:29:12:104,12,0	1/1:17,2:18:11.04:89,11,0	./.	1/1:9,0:9:3.01:44,3,0	1/1:35,0:35:8.65:75,9,0	0/1:6,0:5:0:0,0,0	1/1:5,0:5:3.01:32,3,0	0/1:17,12:30:50.41:119,0,50	0/0:13,0:13:0.32:0,0,1	1/1:7,0:6:6.02:74,6,0	1/1:14,0:14:14.98:140,15,0	1/1:4,0:4:2.99:24,3,0
chr10	34143236	.	GTC	G	18019.18	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=12.655;DP=687;FS=0.000;HRun=0;HaplotypeScore=87.4891;InbreedingCoeff=0.9985;MQ=65.65;MQ0=6;MQRankSum=1.003;QD=41.52;ReadPosRankSum=3.977;VQSLOD=6.8537;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,42:42:99:1954,120,0	1/1:0,14:14:30.10:488,30,0	0/0:34,0:24:71.20:0,71,1277	0/0:32,0:28:81.28:0,81,1552	0/0:15,0:15:45.15:0,45,881	0/0:27,0:27:81.26:0,81,1593	0/0:27,0:27:81.28:0,81,1629	1/1:0,27:27:78.22:1176,78,0	0/0:25,0:25:75.24:0,75,1484	1/1:0,22:22:66.15:1021,66,0	1/1:0,7:7:18.06:291,18,0	0/0:32,0:32:96.30:0,96,1846	1/1:0,21:21:54.18:874,54,0	1/1:0,34:34:78.27:1270,78,0	1/1:0,39:39:93.32:1515,93,0	1/1:0,37:37:96.06:1562,96,0	0/0:32,0:32:96.33:0,96,1944	1/1:3,28:31:45.78:1189,46,0	1/1:0,13:13:39:506,39,0	1/1:0,18:18:48.16:781,48,0	1/1:0,42:41:99:1612,99,0	1/1:0,15:15:39.13:634,39,0	0/0:10,0:9:27.09:0,27,547	0/0:19,0:19:57.18:0,57,1119	1/1:0,16:15:42.14:682,42,0	1/1:0,18:18:54.16:853,54,0	1/1:0,26:26:69.24:1124,69,0	1/1:0,12:12:30.10:488,30,0
chr10	34143966	.	T	TACAG	27658.52	PASS	AB=0.857;AC=51;AF=0.911;AN=56;BaseQRankSum=-6.272;DP=658;FS=5.854;HRun=0;HaplotypeScore=142.0658;InbreedingCoeff=0.8092;MQ=80.48;MQ0=2;MQRankSum=-10.774;QD=47.61;ReadPosRankSum=6.269;VQSLOD=5.4468;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,27:32:60.16:1540,60,0	1/1:2,5:7:15.05:382,15,0	0/0:35,0:35:78.25:0,78,1288	0/0:41,0:41:93.30:0,93,1589	1/1:4,15:19:27.09:693,27,0	1/1:5,17:23:45.14:1154,45,0	1/1:9,19:28:51.16:1209,51,0	1/1:15,24:41:84.24:1853,84,0	1/1:7,20:27:57.17:1316,57,0	1/1:7,23:31:75.19:1810,75,0	1/1:3,10:13:27.09:691,27,0	1/1:4,23:28:60.16:1422,60,0	1/1:3,15:19:45.14:1007,45,0	1/1:5,15:21:42.13:1023,42,0	1/1:8,19:27:39.13:999,39,0	1/1:13,18:31:54.14:1342,54,0	1/1:3,12:15:33.11:845,33,0	1/1:7,11:18:33.11:846,33,0	1/1:12,10:23:39.10:811,39,0	1/1:10,11:20:27.09:683,27,0	1/1:5,31:37:79.24:1943,79,0	1/1:9,14:23:33.11:833,33,0	1/1:3,11:15:30.10:746,30,0	1/1:3,17:20:42.11:1078,42,0	1/1:2,12:14:33.11:845,33,0	1/1:3,11:13:33.11:847,33,0	1/1:6,22:28:63.22:1586,63,0	0/1:5,1:6:6.14:153,0,6
chr10	34143988	.	TAC	T	2142.95	PASS	AB=0.874;AC=35;AF=0.673;AN=52;BaseQRankSum=0.322;DP=552;FS=6.498;HRun=0;HaplotypeScore=174.7272;InbreedingCoeff=0.3936;MQ=60.56;MQ0=7;MQRankSum=-2.641;QD=5.79;ReadPosRankSum=1.364;VQSLOD=2.9489;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:31:11.88:0,12,96	0/1:5,2:7:33.89:42,0,34	./.	./.	0/0:13,1:13:3.01:0,3,40	0/0:19,0:21:4.89:0,5,130	0/0:19,0:22:18.03:0,18,211	0/1:29,0:28:9.47:66,0,9	0/0:19,0:23:20.83:0,21,209	1/1:21,3:25:20.80:175,21,0	1/1:11,2:13:6.02:65,6,0	1/1:17,3:24:1.61:128,2,0	0/1:9,4:14:23.79:143,0,24	1/1:9,5:15:15.04:163,15,0	1/1:17,7:26:32.44:305,32,0	1/1:13,7:22:26.74:255,27,0	0/0:14,0:14:9.44:0,9,92	0/1:10,1:12:6.21:69,0,6	1/1:20,1:21:11.86:112,12,0	0/1:12,0:12:10.87:11,0,39	1/1:43,3:44:12.45:123,12,0	1/1:8,2:12:8.92:71,9,0	1/1:10,3:14:14.75:115,15,0	1/1:16,1:18:2.82:14,3,0	1/1:12,2:14:5.68:65,6,0	1/1:13,2:15:6.49:66,6,0	1/1:16,5:21:15.04:162,15,0	1/1:2,6:8:15.04:163,15,0
chr10	34144435	.	TA	T	2678.06	PASS	AB=0.800;AC=38;AF=0.679;AN=56;BaseQRankSum=2.572;DP=494;FS=12.581;HRun=15;HaplotypeScore=53.6170;InbreedingCoeff=0.4836;MQ=53.54;MQ0=56;MQRankSum=0.739;QD=6.76;ReadPosRankSum=3.601;VQSLOD=1.3129;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,0:10:14.26:41,14,0	1/1:6,6:13:25.54:155,26,0	0/0:29,0:12:22.73:0,23,142	0/0:16,0:5:5.26:0,5,28	0/1:21,3:23:18.98:19,0,208	0/0:17,0:16:25.86:0,26,193	0/1:10,2:10:20.53:21,0,87	1/1:10,9:17:28.44:171,28,0	0/1:10,2:11:14.86:15,0,119	1/1:6,17:24:37.06:231,37,0	1/1:10,9:19:2.11:130,2,0	0/0:11,0:11:17.94:0,18,146	0/1:6,9:15:3.66:98,0,4	1/1:8,4:8:14.63:92,15,0	1/1:7,8:16:21.26:211,21,0	1/1:5,9:14:31.93:179,32,0	0/1:34,5:28:33.38:33,0,314	1/1:11,15:20:17.48:211,17,0	1/1:8,13:21:16.98:223,17,0	1/1:8,7:13:25.62:159,26,0	1/1:4,7:11:14.05:95,14,0	1/1:1,3:4:8.39:47,8,0	0/0:13,0:11:17.99:0,18,155	0/0:12,0:7:17.78:0,18,139	0/1:6,5:11:2.98:78,0,3	1/1:8,8:17:23.53:151,24,0	1/1:12,15:28:57.12:353,57,0	1/1:8,8:10:23.62:154,24,0
chr10	34144524	.	AAAGCACCTACAGAGG	A	20932.25	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=14.701;DP=474;FS=14.188;HRun=0;HaplotypeScore=202.7996;InbreedingCoeff=0.9693;MQ=71.66;MQ0=0;MQRankSum=-15.059;QD=75.84;ReadPosRankSum=2.282;VQSLOD=3.5049;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,19:21:30.10:1225,30,0	1/1:2,8:10:27.05:1036,27,0	0/0:11,0:10:21.07:0,21,958	0/0:32,0:30:75.25:0,75,4075	0/0:21,0:21:60.21:0,60,3699	0/0:17,0:17:42.14:0,42,2770	0/0:10,0:10:24.08:0,24,1377	1/1:10,6:16:18.04:454,18,0	0/0:8,0:8:24.08:0,24,1714	1/1:6,10:16:45.15:1644,45,0	1/1:4,12:16:24.08:882,24,0	0/0:18,0:18:45.15:0,45,3116	1/1:4,8:12:36.12:1229,36,0	1/1:1,6:7:9.03:388,9,0	1/1:6,14:20:51.17:1964,51,0	1/1:1,13:14:27.09:1165,27,0	0/0:41,0:41:99:0,114,7531	1/1:11,6:16:33.11:982,33,0	1/1:6,7:13:27.09:989,27,0	1/1:3,19:23:45.15:1804,45,0	1/1:5,9:14:6.02:259,6,0	1/1:0,9:9:24.08:947,24,0	0/0:12,0:12:27.09:0,27,1860	0/0:28,0:28:84.29:0,84,5812	1/1:3,13:16:21.07:866,21,0	1/1:2,16:18:45.15:1734,45,0	1/1:2,25:27:63.21:2717,63,0	1/1:2,5:7:15.05:647,15,0
chr10	34144534	.	CA	C	2242.41	PASS	AB=1.000;AC=35;AF=0.625;AN=56;BaseQRankSum=15.878;DP=446;FS=21.385;HRun=1;HaplotypeScore=143.4847;InbreedingCoeff=0.8961;MQ=79.27;MQ0=0;MQRankSum=-15.476;QD=9.67;ReadPosRankSum=4.032;VQSLOD=0.0753;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:19:25.98:143,26,0	1/1:9,0:9:11.10:53,11,0	0/0:16,0:16:38.96:0,39,563	0/0:31,0:30:80.21:0,80,1203	0/0:23,0:23:66.23:0,66,1054	0/0:19,0:19:51.17:0,51,805	0/0:11,0:11:33.10:0,33,504	1/1:6,0:6:14.02:142,14,0	0/0:9,0:9:27.08:0,27,408	1/1:12,3:15:39.49:265,39,0	1/1:12,0:12:6.49:102,6,0	0/0:15,0:15:45.15:0,45,719	1/1:8,4:12:32:238,32,0	1/1:6,0:6:7.49:27,7,0	1/1:14,3:17:43.96:250,44,0	1/1:13,0:13:22.46:80,22,0	0/0:45,0:45:99:0,135,2157	1/1:10,4:13:30.02:259,30,0	1/1:8,2:10:10.89:131,11,0	1/1:20,0:20:39.27:213,39,0	1/1:9,0:9:4.99:18,5,0	1/1:9,0:9:20.48:105,20,0	0/0:11,0:11:30.10:0,30,478	0/0:33,0:33:93.32:0,93,1487	0/1:13,0:13:0.15:35,0,0	1/1:16,0:16:34.96:167,35,0	1/1:25,0:25:53.65:190,54,0	1/1:6,1:7:10.32:41,10,0
chr10	34144777	.	TTG	T	10223.04	PASS	AB=0.545;AC=35;AF=0.625;AN=56;BaseQRankSum=11.981;DP=674;FS=1.522;HRun=0;HaplotypeScore=91.4370;InbreedingCoeff=0.9427;MQ=70.06;MQ0=4;MQRankSum=-1.879;QD=24.00;ReadPosRankSum=1.304;VQSLOD=5.5445;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,0:40:59.66:293,60,0	1/1:1,8:9:18.06:220,18,0	0/0:36,0:27:30.09:0,30,433	0/0:31,0:26:28.56:0,29,393	0/0:41,0:40:99:0,111,1794	0/0:15,0:15:42.13:0,42,658	0/0:23,0:23:60.20:0,60,965	1/1:13,27:40:81.19:931,81,0	0/0:14,0:14:36.12:0,36,583	1/1:3,26:29:75.23:916,75,0	1/1:3,23:26:60.15:716,60,0	0/0:22,0:22:51.17:0,51,827	1/1:2,13:16:29.93:344,30,0	1/1:2,19:21:39.12:477,39,0	1/1:3,29:32:78.24:953,78,0	1/1:2,22:24:60.19:733,60,0	0/0:23,0:23:51.15:0,51,792	0/1:3,15:18:1.79:401,0,2	1/1:7,23:29:66.18:782,66,0	1/1:5,20:25:51.16:623,51,0	1/1:4,21:25:51.16:623,51,0	1/1:4,18:22:42.13:513,42,0	0/0:22,0:22:60.20:0,60,973	0/0:20,0:20:48.15:0,48,754	1/1:4,7:11:18.06:220,18,0	1/1:7,24:30:69.17:817,69,0	1/1:5,15:20:44.97:550,45,0	1/1:2,5:7:9.03:110,9,0
chr10	34145902	.	A	ACTTTCTTTCTTT	1980.78	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=1.627;DP=633;FS=8.688;HRun=0;HaplotypeScore=236.6210;InbreedingCoeff=0.8924;MQ=71.68;MQ0=0;MQRankSum=-3.952;QD=76.18;ReadPosRankSum=-1.531;VQSLOD=1.5764;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:18,8:26:42.13:2076,42,0	0/0:10,0:10:18.05:0,18,553	0/0:17,0:18:21.03:0,21,627	0/0:19,0:17:6.21:0,6,635	0/0:26,0:26:54.17:0,54,1800	0/0:23,0:23:54.18:0,54,1860	0/0:22,0:22:45.12:0,45,1378	0/0:38,0:38:57.14:0,57,1587	0/0:23,0:23:45.14:0,45,1502	0/0:27,0:27:66.22:0,66,2053	0/0:18,0:18:45.15:0,45,1549	0/0:17,0:17:30.10:0,30,995	0/0:23,0:23:42.14:0,42,1395	0/0:18,0:18:24.08:0,24,790	0/0:22,0:22:45.15:0,45,1502	0/0:14,0:14:33.10:0,33,1041	0/0:42,0:42:76.72:0,77,2545	0/0:31,0:31:60.21:0,60,1892	0/0:21,0:21:36.04:0,36,1084	0/0:24,0:24:57.18:0,57,1712	0/0:19,0:19:36.12:0,36,1110	0/0:16,0:16:45.14:0,45,1334	0/0:27,0:27:60.21:0,60,2058	0/0:27,0:27:51.15:0,51,1672	0/0:19,0:19:39.13:0,39,1242	0/0:21,0:21:48.16:0,48,1603	0/0:29,0:27:63.02:0,63,2025	0/0:13,0:13:21.07:0,21,650
chr10	34145925	.	TTG	T	380.47	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=5.094;DP=601;FS=8.497;HRun=0;HaplotypeScore=115.3537;InbreedingCoeff=0.6440;MQ=70.30;MQ0=0;MQRankSum=-1.468;QD=10.01;ReadPosRankSum=-2.901;VQSLOD=2.4179;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:5,11:16:41.84:467,42,0	0/0:8,0:8:21.02:0,21,223	0/0:16,0:14:30.95:0,31,303	0/1:22,0:19:18.79:19,0,148	0/0:26,0:26:78.05:0,78,1064	0/0:24,0:24:72.09:0,72,1041	0/0:24,0:24:65.93:0,66,862	0/0:31,0:31:85.04:0,85,944	0/0:23,0:23:69.21:0,69,1075	0/0:24,0:24:63.28:0,63,682	0/0:24,0:24:51.74:0,52,660	0/0:16,0:16:48.15:0,48,739	0/0:20,0:20:50.95:0,51,501	0/0:15,0:15:38.81:0,39,379	0/0:25,0:25:56.16:0,56,600	0/0:19,0:19:50.98:0,51,538	0/0:32,0:32:93.14:0,93,1334	0/0:26,0:26:66.05:0,66,679	0/0:20,0:20:54.94:0,55,524	0/0:23,0:23:55.37:0,55,605	0/0:12,0:12:23.82:0,24,233	0/0:17,0:17:44.21:0,44,499	0/0:31,0:31:87.29:0,87,1381	0/0:25,0:25:72.10:0,72,1049	0/0:25,0:25:53.98:0,54,519	0/0:20,0:20:55.28:0,55,629	0/0:30,0:28:66.02:0,66,739	0/0:7,0:7:18.03:0,18,184
chr10	34146234	.	TGC	T	768.58	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.672;DP=770;FS=0.000;HRun=0;HaplotypeScore=185.6904;InbreedingCoeff=0.7759;MQ=58.51;MQ0=3;MQRankSum=1.544;QD=19.71;ReadPosRankSum=1.523;VQSLOD=3.6879;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,34:39:69.19:863,69,0	0/0:13,0:13:26.36:0,26,456	0/0:14,0:5:5.82:0,6,36	0/0:13,0:6:3.01:0,3,45	0/0:25,0:25:29.93:0,30,588	0/0:23,0:23:66.17:0,66,1063	0/0:34,0:34:87.20:0,87,1363	0/0:21,0:21:38.68:0,39,566	0/0:16,0:16:48.16:0,48,806	0/0:35,0:35:84.08:0,84,1328	0/0:20,0:20:45.15:0,45,754	0/0:35,0:35:90.14:0,90,1493	0/0:24,0:24:60.19:0,60,988	0/0:39,0:39:99:0,102,1639	0/0:32,0:32:81.25:0,81,1322	0/0:22,0:22:57.15:0,57,912	0/0:38,0:38:96.28:0,96,1586	0/0:31,0:31:84.23:0,84,1393	0/0:20,0:19:42.07:0,42,595	0/0:23,0:23:54.18:0,54,908	0/0:70,0:70:99:0,184,2987	0/0:20,0:20:39.10:0,39,660	0/0:23,0:23:57.07:0,57,876	0/0:40,0:40:99:0,102,1528	0/0:23,0:23:60.21:0,60,1019	0/0:33,0:33:84.24:0,84,1356	0/0:27,0:27:69.24:0,69,1156	0/0:15,0:15:39.12:0,39,633
chr10	34146284	.	ATGTG	A	1656.70	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.077;DP=1027;FS=0.000;HRun=0;HaplotypeScore=200.1812;InbreedingCoeff=0.9960;MQ=55.05;MQ0=19;MQRankSum=-1.292;QD=31.86;ReadPosRankSum=-0.971;VQSLOD=3.2292;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:14,37:52:99:1752,104,0	0/0:8,0:8:21.06:0,21,455	0/0:68,0:28:66.11:0,66,1447	0/0:63,0:22:46.15:0,46,1182	0/0:31,0:31:78.26:0,78,2015	0/0:28,0:28:78.21:0,78,1796	0/0:32,0:31:87.23:0,87,1962	0/0:45,0:42:99:0,114,2509	0/0:29,0:29:84.27:0,84,2141	0/0:31,0:31:87.26:0,87,2181	0/0:24,0:24:66.23:0,66,1676	0/0:44,0:44:99:0,126,3036	0/0:29,0:29:84.23:0,84,1958	0/0:49,0:49:99:0,126,3314	0/0:36,0:36:99:0,105,2768	0/0:29,0:29:84.27:0,84,2057	0/0:34,0:34:93.27:0,93,2248	0/0:27,0:27:71.68:0,72,1841	0/0:27,0:23:63.21:0,63,1545	0/0:23,0:23:57.18:0,57,1391	0/0:95,0:91:99:0,259,6405	0/0:28,0:28:63.20:0,63,1527	0/0:30,0:30:84.12:0,84,2034	0/0:62,0:62:99:0,175,4238	0/0:20,0:20:51.13:0,51,1179	0/0:30,0:30:90.28:0,90,2064	0/0:31,0:31:81.01:0,81,2024	0/0:21,0:21:63.22:0,63,1590
chr10	34146357	.	CGT	C	1037.45	PASS	AB=0.923;AC=5;AF=0.089;AN=56;BaseQRankSum=7.704;DP=849;FS=3.536;HRun=0;HaplotypeScore=115.8443;InbreedingCoeff=0.2869;MQ=54.20;MQ0=16;MQRankSum=-0.481;QD=7.57;ReadPosRankSum=1.570;VQSLOD=3.4818;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,41:55:88.16:1065,88,0	0/0:12,0:12:33.11:0,33,533	0/0:51,1:20:6.41:0,6,454	0/0:36,0:16:24.06:0,24,342	0/0:25,1:26:29.51:0,30,900	0/0:28,1:29:20.56:0,21,809	0/0:30,0:30:60.18:0,60,941	0/0:45,1:46:56.64:0,57,1399	0/0:25,2:27:14.41:0,14,672	0/0:28,0:28:72.24:0,72,1125	0/0:16,0:16:42.14:0,42,681	0/0:28,0:29:69.05:0,69,1041	0/1:22,2:24:16.14:16,0,718	0/0:40,0:40:84.23:0,84,1281	0/1:26,1:27:13.78:14,0,746	0/0:30,0:30:81.26:0,81,1285	0/1:26,4:30:64.17:64,0,538	0/0:24,1:27:23.52:0,24,840	0/0:15,0:15:21.06:0,21,319	0/0:15,0:15:30.10:0,30,485	0/0:55,0:54:99:0,105,1542	0/0:22,0:23:51.17:0,51,813	0/0:31,0:31:75.22:0,75,1153	0/0:46,0:45:83.42:0,83,1445	0/0:22,1:23:20.58:0,21,838	0/0:29,2:32:1.90:0,2,974	0/0:25,0:25:51.17:0,51,824	0/0:19,0:19:39.09:0,39,576
chr10	34146520	.	GCATACATA	G	16387.61	PASS	AC=44;AF=0.815;AN=54;BaseQRankSum=-0.497;DP=644;FS=12.472;HRun=0;HaplotypeScore=193.5617;InbreedingCoeff=0.9097;MQ=52.79;MQ0=3;MQRankSum=-8.465;QD=31.88;ReadPosRankSum=0.966;VQSLOD=3.8259;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:27:36.05:0,36,1185	1/1:3,7:10:24.03:441,24,0	0/0:19,0:15:17.93:0,18,207	./.	1/1:8,21:29:33.02:554,33,0	1/1:16,20:36:42.14:949,42,0	1/1:19,11:30:8.77:113,9,0	1/1:28,0:28:11.93:141,12,0	1/1:8,22:31:51.18:1271,51,0	1/1:13,21:34:87.15:1866,87,0	1/1:8,12:20:48.06:890,48,0	0/0:13,0:29:48.16:0,48,1495	1/1:9,9:18:30.09:682,30,0	1/1:14,14:28:51.07:1128,51,0	1/1:11,12:23:47.96:1024,48,0	1/1:14,10:25:42.06:852,42,0	1/1:8,9:17:8.98:171,9,0	1/1:13,4:17:17.99:294,18,0	1/1:11,2:14:9.03:208,9,0	1/1:12,14:26:63.59:1305,64,0	1/1:7,1:8:3.01:37,3,0	1/1:13,12:25:39.02:787,39,0	0/0:6,0:20:26.01:0,26,808	0/0:13,0:28:38.61:0,39,1058	1/1:10,12:22:42.13:915,42,0	1/1:8,11:19:36.12:863,36,0	1/1:19,17:35:66.03:1308,66,0	1/1:10,8:18:27.04:589,27,0
chr10	34146589	.	CATAT	C	17504.77	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=8.541;DP=676;FS=4.010;HRun=0;HaplotypeScore=186.3376;InbreedingCoeff=0.9887;MQ=57.68;MQ0=0;MQRankSum=-6.660;QD=40.52;ReadPosRankSum=0.370;VQSLOD=5.1334;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:30:61.55:0,62,280	1/1:1,13:14:39.13:682,39,0	0/0:13,0:11:15.05:0,15,309	0/0:16,0:13:8.84:0,9,415	0/0:25,0:25:45.15:0,45,1130	0/0:27,0:27:57.20:0,57,1412	0/0:28,0:28:69.24:0,69,1755	1/1:9,20:29:57.19:989,57,0	0/0:24,0:24:48.16:0,48,1180	1/1:14,30:43:87.30:1505,87,0	1/1:3,15:18:45.15:786,45,0	0/0:25,0:25:60.21:0,60,1479	1/1:3,20:23:57.19:997,57,0	1/1:7,17:24:42.14:736,42,0	1/1:5,21:26:60.21:1048,60,0	1/1:2,29:31:81.28:1414,81,0	0/0:15,0:15:36.12:0,36,891	1/1:3,12:15:33.11:578,33,0	1/1:1,14:15:42.13:681,42,0	1/1:4,28:32:81.28:1413,81,0	1/1:1,18:19:45.15:785,45,0	1/1:6,27:33:71.93:1249,72,0	0/0:26,0:27:72.03:0,72,1767	0/0:14,0:14:24.07:0,24,561	1/1:4,16:20:45.15:785,45,0	1/1:5,31:36:93.28:1596,93,0	1/1:3,26:29:78.27:1366,78,0	1/1:3,21:24:51.17:894,51,0
chr10	34147308	.	T	TTCTC	3565.72	PASS	AB=0.823;AC=33;AF=0.611;AN=54;BaseQRankSum=-2.886;DP=676;FS=4.873;HRun=0;HaplotypeScore=148.5652;InbreedingCoeff=0.7485;MQ=67.19;MQ0=10;MQRankSum=-4.378;QD=7.92;ReadPosRankSum=-4.962;VQSLOD=1.1075;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:20:14.23:0,14,118	1/1:6,0:15:16.90:91,17,0	./.	0/1:39,0:18:0:0,0,0	0/0:15,0:27:19.73:0,20,167	0/0:14,0:26:21.02:0,21,193	0/0:6,0:16:17.89:0,18,154	1/1:34,0:34:29.05:285,29,0	0/0:7,0:19:33.03:0,33,305	0/1:22,8:34:3.47:323,0,3	1/1:8,0:22:3.01:52,3,0	0/0:17,0:19:24.06:0,24,334	1/1:12,6:22:17.72:311,18,0	0/1:13,0:20:35.38:37,0,35	1/1:18,1:31:18.06:322,18,0	1/1:16,1:27:12.04:225,12,0	0/0:19,0:34:30.03:0,30,279	1/1:11,1:19:15.05:280,15,0	1/1:16,3:22:20.93:251,21,0	1/1:15,12:31:11.78:225,12,0	1/1:10,0:11:11.73:85,12,0	1/1:10,8:22:9.03:178,9,0	0/0:12,0:15:12.03:0,12,169	0/0:18,0:18:24.06:0,24,356	1/1:8,12:22:14.79:262,15,0	1/1:12,7:24:35.99:344,36,0	1/1:15,7:22:5.57:141,6,0	1/1:23,4:29:8.77:154,9,0
chr10	34148023	.	A	AT	919.74	PASS	AB=0.937;AC=13;AF=0.241;AN=54;BaseQRankSum=-3.951;DP=459;FS=4.161;HRun=11;HaplotypeScore=103.6251;InbreedingCoeff=0.5204;MQ=66.78;MQ0=4;MQRankSum=-0.133;QD=6.39;ReadPosRankSum=1.465;VQSLOD=2.4001;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:22:26.46:0,26,76	0/0:14,0:13:17.90:0,18,137	0/0:23,0:9:3.11:0,3,32	0/1:32,0:17:0.92:1,0,41	1/1:16,14:28:44.78:420,45,0	0/1:6,4:10:5.20:134,0,5	1/1:5,2:7:8.99:83,9,0	0/0:27,0:27:27.95:0,28,286	1/1:4,1:5:9.02:89,9,0	0/0:26,0:25:43.82:0,44,344	0/0:15,0:13:11.86:0,12,91	0/0:16,0:16:23.84:0,24,186	0/0:17,0:15:8.94:0,9,67	0/0:9,0:10:13.97:0,14,99	0/0:13,0:13:14.91:0,15,112	0/0:18,0:19:19.59:0,20,141	1/1:8,10:15:15.87:330,16,0	0/0:18,0:18:14.85:0,15,107	0/0:18,0:19:43.24:0,43,314	0/1:13,0:12:8.47:8,0,115	./.	0/1:4,0:3:0:0,0,0	0/0:5,0:5:2.97:0,3,23	0/0:8,0:8:14.87:0,15,109	0/0:25,0:25:11.82:0,12,93	0/0:17,0:17:35.82:0,36,276	0/1:22,0:20:9.36:9,0,116	0/0:13,0:12:8.92:0,9,70
chr10	34148040	.	ATTCTTTTT	A	6521.17	PASS	AB=0.771;AC=32;AF=0.593;AN=54;BaseQRankSum=-0.589;DP=452;FS=4.530;HRun=0;HaplotypeScore=116.7886;InbreedingCoeff=0.7225;MQ=54.86;MQ0=16;MQRankSum=-1.958;QD=24.33;ReadPosRankSum=1.068;VQSLOD=4.4227;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:12.19:0,12,247	1/1:3,2:11:16.50:230,16,0	0/1:39,0:7:24:24,0,34	0/0:45,0:14:2.42:0,2,142	0/0:29,0:27:45.26:0,45,1334	0/0:9,0:8:18.06:0,18,351	0/0:8,0:7:18.05:0,18,416	1/1:4,1:19:50.89:645,51,0	0/0:5,0:5:15.04:0,15,355	0/1:4,21:25:64.27:824,0,64	1/1:1,13:13:35.89:645,36,0	0/0:14,0:14:32.87:0,33,769	1/1:0,10:8:3.01:80,3,0	1/1:5,1:7:4.68:150,5,0	1/1:0,9:9:12.04:308,12,0	1/1:2,13:16:16.79:454,17,0	0/0:18,0:15:39.03:0,39,900	1/1:0,13:13:9.03:235,9,0	1/1:15,1:17:30.16:452,30,0	1/1:3,10:11:24:451,24,0	./.	1/1:1,4:3:8.99:165,9,0	0/0:9,0:9:18.06:0,18,594	0/0:12,0:11:24:0,24,672	1/1:3,15:21:30.09:668,30,0	1/1:4,9:14:41.76:657,42,0	1/1:2,14:15:6.73:226,7,0	1/1:2,9:9:12.04:308,12,0
chr10	34148041	.	TTC	T	3195.25	PASS	AB=0.955;AC=39;AF=0.722;AN=54;BaseQRankSum=3.061;DP=448;FS=13.112;HRun=0;HaplotypeScore=95.6338;InbreedingCoeff=0.4046;MQ=54.93;MQ0=16;MQRankSum=-0.786;QD=8.28;ReadPosRankSum=1.088;VQSLOD=2.5357;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:40.85:0,41,240	1/1:12,0:11:16.47:128,16,0	0/1:39,0:7:24.75:25,0,35	0/1:45,0:14:1.63:2,0,54	0/1:27,3:27:99:125,0,173	0/1:8,1:8:26.40:42,0,26	0/0:8,0:7:15.09:0,15,76	1/1:21,0:19:49.34:387,49,0	0/1:5,0:5:2.37:2,0,61	1/1:26,0:25:18.56:468,19,0	1/1:15,0:13:34.87:287,35,0	0/1:12,1:13:4.40:4,0,180	1/1:10,0:8:3.01:32,3,0	1/1:7,0:7:10.47:108,10,0	1/1:9,0:9:12:114,12,0	1/1:15,0:15:17.45:170,17,0	0/1:17,1:15:10.51:11,0,168	1/1:13,0:13:9:89,9,0	1/1:17,0:17:38.69:338,39,0	1/1:13,0:11:23.81:208,24,0	./.	1/1:5,0:3:8.88:68,9,0	0/0:9,0:9:14.38:0,14,125	0/0:12,0:11:20.59:0,21,175	1/1:21,0:20:29.10:289,29,0	1/1:15,0:14:31.42:280,31,0	1/1:17,0:15:6.61:82,7,0	1/1:11,0:9:11.93:113,12,0
chr10	34148042	.	TC	T	2952.81	PASS	AB=0.909;AC=39;AF=0.722;AN=54;BaseQRankSum=2.618;DP=444;FS=10.385;HRun=1;HaplotypeScore=91.0371;InbreedingCoeff=0.3622;MQ=54.99;MQ0=16;MQRankSum=-1.048;QD=8.02;ReadPosRankSum=0.985;VQSLOD=-0.0400;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:51.76:0,52,291	1/1:12,0:11:17.86:120,18,0	0/1:38,1:7:24.75:25,0,35	0/1:44,1:14:4.58:5,0,43	0/1:25,5:27:99:132,0,147	0/1:8,1:8:29.45:47,0,29	0/1:8,0:7:0.51:1,0,30	1/1:20,0:18:50.40:370,50,0	0/1:4,1:5:23.66:24,0,35	1/1:25,1:25:31.13:442,31,0	1/1:15,0:13:35.29:246,35,0	0/0:13,0:13:7.67:0,8,146	1/1:10,0:8:3:25,3,0	1/1:7,0:7:14.49:114,14,0	1/1:9,0:9:11.90:89,12,0	1/1:15,0:15:17.63:134,18,0	0/0:17,1:15:6.24:0,6,176	1/1:13,0:13:8.94:70,9,0	1/1:15,0:15:44.30:357,44,0	1/1:13,0:11:23.73:180,24,0	./.	1/1:5,0:3:8.80:58,9,0	0/1:7,2:9:5.82:6,0,59	0/0:12,0:11:12.47:0,12,105	1/1:21,0:20:29.86:239,30,0	1/1:15,0:14:40:277,40,0	1/1:16,0:14:10.82:75,11,0	1/1:11,0:9:11.84:91,12,0
chr10	34148451	.	CT	C	3843.01	PASS	AB=0.808;AC=32;AF=0.571;AN=56;BaseQRankSum=6.251;DP=490;FS=0.000;HRun=4;HaplotypeScore=157.9212;InbreedingCoeff=0.4926;MQ=41.62;MQ0=12;MQRankSum=-4.962;QD=13.12;ReadPosRankSum=5.435;VQSLOD=1.7479;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:15,9:25:40.90:297,41,0	1/1:4,3:7:14.21:131,14,0	0/1:24,1:6:19.87:20,0,103	0/0:30,2:6:13.10:0,13,138	0/0:30,0:29:42.76:0,43,690	0/0:15,0:15:26.85:0,27,342	0/0:20,0:19:42.61:0,43,459	0/1:19,1:17:26.57:131,0,27	0/0:20,0:20:3.86:0,4,153	0/1:8,11:18:47.55:196,0,48	1/1:6,10:16:15.01:251,15,0	0/0:25,0:25:39.13:0,39,537	1/1:8,9:16:19.87:258,20,0	1/1:4,8:12:33.73:269,34,0	0/1:9,12:21:15.23:284,0,15	1/1:7,5:12:30.46:213,30,0	0/0:12,0:12:23.01:0,23,273	0/1:6,0:7:11.40:65,0,11	1/1:17,5:21:23.08:326,23,0	1/1:7,9:15:12.02:214,12,0	1/1:2,2:4:11.60:83,12,0	1/1:5,5:10:20.65:170,21,0	0/0:28,0:28:48.41:0,48,634	0/0:14,0:13:23.25:0,23,299	0/1:9,9:18:19.18:243,0,19	1/1:8,7:15:14.21:262,14,0	1/1:9,13:22:34.37:355,34,0	1/1:1,4:5:0.04:74,0,0
chr10	34148453	.	T	TTC	7726.12	PASS	AB=0.839;AC=21;AF=0.375;AN=56;BaseQRankSum=1.618;DP=504;FS=7.852;HRun=0;HaplotypeScore=165.9791;InbreedingCoeff=-0.0758;MQ=41.06;MQ0=14;MQRankSum=-4.231;QD=27.59;ReadPosRankSum=7.073;VQSLOD=5.4793;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,11:25:27.35:544,27,0	0/1:6,1:7:58.47:159,0,58	0/0:23,0:6:14.73:0,15,150	0/0:33,0:6:14.88:0,15,194	0/0:31,0:30:78.09:0,78,1054	0/0:17,0:17:48.05:0,48,596	0/0:20,0:19:51.14:0,51,703	0/1:16,5:18:36.67:456,0,37	0/0:19,0:19:23.82:0,24,251	0/1:18,0:17:99:289,0,175	0/1:15,2:18:21.10:512,0,21	0/0:25,0:25:39.13:0,39,590	0/1:14,4:17:3.71:607,0,4	0/1:10,2:12:5.78:315,0,6	0/1:16,5:21:77.86:651,0,78	0/1:9,6:15:3.74:453,0,4	0/0:12,0:12:29.81:0,30,413	1/1:6,1:7:18.02:225,18,0	0/1:15,6:20:31.55:680,0,32	0/1:14,3:16:45.02:439,0,45	1/1:3,2:5:12.04:215,12,0	0/1:8,2:10:52.24:349,0,52	0/0:27,0:27:53.21:0,53,733	0/0:15,0:15:20.51:0,21,349	0/1:14,5:19:87.01:507,0,87	0/1:12,5:17:20.42:531,0,20	0/1:19,5:24:74.51:688,0,75	0/1:5,0:5:26.09:106,0,26
chr10	34148456	.	CTTTTCTT	C	9490.61	PASS	AB=0.936;AC=41;AF=0.732;AN=56;BaseQRankSum=8.105;DP=496;FS=0.000;HRun=0;HaplotypeScore=197.1693;InbreedingCoeff=0.3918;MQ=40.08;MQ0=22;MQRankSum=-6.529;QD=24.72;ReadPosRankSum=4.037;VQSLOD=4.0711;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:11,0:20:0.12:253,0,0	1/1:4,3:7:20.95:312,21,0	0/0:27,0:5:12.45:0,12,146	0/0:35,0:6:11.80:0,12,107	0/1:31,0:30:48.79:49,0,481	0/1:15,0:15:74.98:75,0,212	0/1:20,0:19:0.74:1,0,258	1/1:21,0:18:32.50:224,32,0	0/1:18,0:18:96.39:145,0,96	1/1:7,8:16:34.46:592,34,0	1/1:10,9:20:48.08:793,48,0	0/0:24,0:24:35.40:0,35,712	1/1:8,6:15:39.64:675,40,0	1/1:4,7:12:33.56:604,34,0	1/1:8,8:20:51.26:856,51,0	1/1:11,4:16:35.73:521,36,0	0/1:11,0:12:61.92:71,0,62	1/1:6,0:7:8.15:132,8,0	1/1:14,0:18:38.74:508,39,0	1/1:8,8:16:41.92:644,42,0	1/1:4,1:5:11.95:148,12,0	1/1:6,3:10:29.89:383,30,0	0/0:26,0:26:4.84:0,5,755	0/1:15,0:15:19.81:20,0,412	1/1:11,7:20:46.79:743,47,0	1/1:9,5:16:37.47:634,37,0	1/1:16,7:24:56.64:844,57,0	1/1:1,3:5:15.05:263,15,0
chr10	34148463	.	T	TTC	1537.85	PASS	AB=0.979;AC=19;AF=0.339;AN=56;BaseQRankSum=9.504;DP=505;FS=8.354;HRun=0;HaplotypeScore=198.5955;InbreedingCoeff=-0.1949;MQ=36.24;MQ0=27;MQRankSum=-7.447;QD=5.96;ReadPosRankSum=2.767;VQSLOD=2.5077;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:19:14.36:0,14,285	0/1:7,0:7:9.76:66,0,10	0/0:21,0:3:9.02:0,9,108	0/0:46,0:3:6.02:0,6,88	0/0:31,0:30:72.02:0,72,939	0/0:16,0:16:48.09:0,48,687	0/0:18,0:17:42.61:0,43,632	0/1:12,7:15:2.41:137,0,2	0/0:17,0:17:17.77:0,18,139	1/1:16,0:15:3.84:86,4,0	0/1:23,1:24:4.80:239,0,5	0/0:22,0:22:30.09:0,30,431	0/1:16,0:16:32.87:33,0,128	0/1:14,0:14:62.15:87,0,62	0/1:21,0:21:44.19:44,0,123	0/1:17,0:17:96.70:97,0,99	0/0:13,0:14:18.66:0,19,465	0/1:6,0:7:34.12:90,0,34	0/1:19,0:18:99:166,0,114	1/1:19,0:18:7.43:168,7,0	0/1:4,0:4:12.49:14,0,12	0/1:8,0:8:36.49:42,0,36	0/0:26,0:26:49.50:0,50,692	0/0:14,0:15:2.07:0,2,321	0/1:23,0:23:99:146,0,119	0/1:17,0:17:94.53:96,0,95	0/1:22,0:22:90.01:140,0,90	0/1:5,0:5:15.97:49,0,16
chr10	34148468	.	T	TTC	5640.24	PASS	AB=0.794;AC=20;AF=0.357;AN=56;BaseQRankSum=1.671;DP=513;FS=4.921;HRun=0;HaplotypeScore=189.5249;InbreedingCoeff=-0.4028;MQ=34.98;MQ0=31;MQRankSum=-5.296;QD=19.32;ReadPosRankSum=-0.250;VQSLOD=4.8432;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:18,0:18:37.45:37,0,296	0/1:4,3:7:8.63:221,0,9	0/0:24,0:3:3:0,3,28	0/0:51,0:4:7.25:0,7,74	0/0:29,0:28:62.91:0,63,701	0/0:14,0:14:42.01:0,42,521	0/0:19,0:18:23.37:0,23,529	1/1:12,6:14:13.88:208,14,0	0/0:17,0:17:20.78:0,21,208	0/1:11,5:16:99:385,0,123	0/1:14,11:25:99:644,0,107	0/0:24,0:24:32.82:0,33,415	0/1:12,3:15:99:170,0,211	0/1:10,4:14:99:298,0,170	0/1:16,5:21:99:379,0,210	0/1:9,6:15:36.21:355,0,36	0/0:15,0:15:34.44:0,34,414	0/1:7,1:8:12.87:166,0,13	0/1:14,9:20:99:517,0,137	0/1:11,5:16:96.55:476,0,97	0/1:3,1:4:13.49:14,0,13	0/1:5,2:7:73.11:130,0,73	0/0:26,0:26:45.13:0,45,586	0/1:14,0:14:17.71:18,0,317	0/1:15,9:24:99:615,0,225	0/1:11,5:16:99:299,0,177	0/1:16,8:24:99:611,0,112	0/1:4,1:5:31.05:97,0,31
chr10	34148490	.	CCTTTCCTTTT	C	2349.69	PASS	AB=0.938;AC=24;AF=0.429;AN=56;BaseQRankSum=2.414;DP=654;FS=3.152;HRun=0;HaplotypeScore=368.2279;InbreedingCoeff=-0.7790;MQ=36.49;MQ0=33;MQRankSum=-1.737;QD=4.63;ReadPosRankSum=3.351;VQSLOD=0.7393;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:21,0:22:6.50:7,0,567	0/1:8,0:9:39.85:87,0,40	0/0:41,0:4:2.17:0,2,33	0/0:78,0:13:2.37:0,2,279	0/1:27,0:24:35.56:36,0,327	0/1:17,0:17:15.74:16,0,471	0/0:16,0:15:31.97:0,32,586	0/1:30,0:25:73.42:73,0,106	0/1:18,0:18:99:102,0,303	0/1:24,0:25:99:107,0,148	0/1:30,0:31:99:142,0,217	0/1:14,13:27:99:158,0,165	0/1:15,0:17:9.73:10,0,140	0/1:18,0:19:77.95:130,0,78	0/1:22,0:23:94.40:176,0,94	0/1:24,0:25:99:148,0,215	0/1:13,0:12:49.15:49,0,193	0/0:11,0:10:5.32:0,5,72	0/1:23,0:20:17.26:17,0,147	0/1:18,0:20:67.50:207,0,68	0/1:5,0:5:10.52:67,0,11	0/1:14,0:16:33.53:34,0,65	0/1:14,13:27:99:429,0,146	0/1:18,0:18:99:128,0,149	0/1:36,0:39:40.16:40,0,328	0/1:18,0:17:84.59:85,0,137	0/1:26,0:27:99:181,0,257	0/1:8,0:8:69.88:72,0,70
chr10	34148500	.	TCTTTC	T	5423.97	PASS	AB=0.959;AC=35;AF=0.625;AN=56;BaseQRankSum=-4.883;DP=689;FS=9.169;HRun=0;HaplotypeScore=343.4598;InbreedingCoeff=0.2350;MQ=35.73;MQ0=30;MQRankSum=-1.723;QD=9.81;ReadPosRankSum=5.786;VQSLOD=2.0462;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:22:40.15:40,0,141	1/1:8,2:10:8.75:168,9,0	0/0:46,0:4:6.82:0,7,70	0/1:84,0:13:10.50:10,0,209	0/0:26,0:23:41.08:0,41,573	0/0:16,0:16:11.97:0,12,655	0/0:16,0:16:6.49:0,6,629	1/1:30,0:24:47.72:723,48,0	0/0:18,0:18:34.98:0,35,475	1/1:23,2:24:26.85:331,27,0	1/1:28,3:31:41.69:453,42,0	0/1:24,0:24:6.14:58,0,6	0/1:17,1:17:24.46:111,0,24	1/1:24,3:27:19.18:325,19,0	1/1:21,4:25:6.02:320,6,0	1/1:21,4:25:1.99:414,2,0	0/0:13,0:12:0.47:0,0,303	0/1:11,0:10:30.39:44,0,30	1/1:18,0:16:25.52:273,26,0	1/1:22,4:26:13.22:391,13,0	1/1:6,0:6:14.27:128,14,0	0/1:16,1:17:2.97:142,0,3	1/1:29,0:28:16.61:171,17,0	0/1:19,0:18:42.52:43,0,63	0/1:40,2:42:5.51:352,0,6	1/1:20,2:21:15.67:285,16,0	1/1:28,5:33:33.28:525,33,0	0/1:6,2:8:22.60:117,0,23
chr10	34148505	.	CCT	C	4536.77	PASS	AB=0.812;AC=25;AF=0.446;AN=56;BaseQRankSum=8.351;DP=670;FS=1.551;HRun=0;HaplotypeScore=309.7886;InbreedingCoeff=-0.5231;MQ=35.90;MQ0=26;MQRankSum=-2.375;QD=9.39;ReadPosRankSum=-6.885;VQSLOD=2.4348;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:19,3:22:44.18:44,0,603	0/1:7,3:10:80.59:81,0,120	0/0:46,0:5:11.21:0,11,125	0/0:81,0:14:27.67:0,28,395	0/0:26,0:23:44.32:0,44,801	0/1:17,2:19:36.63:37,0,744	0/1:14,1:15:28.36:28,0,549	0/1:28,0:22:14.78:15,0,190	0/0:20,0:20:38.23:0,38,749	0/1:20,4:23:99:107,0,374	0/1:24,5:29:53.57:54,0,443	1/1:13,11:24:34.82:496,35,0	0/1:10,3:13:95.38:95,0,170	0/1:15,12:27:99:405,0,213	0/1:15,9:24:99:325,0,247	0/1:19,6:25:99:155,0,252	0/0:14,0:13:11.30:0,11,521	0/1:9,1:10:49.93:50,0,101	0/1:13,2:14:46.70:47,0,235	0/1:15,10:25:99:241,0,201	0/1:4,1:5:19.89:47,0,20	0/1:8,8:16:99:273,0,101	1/1:14,15:28:52.05:745,52,0	0/1:13,6:18:99:181,0,228	0/1:28,14:42:99:475,0,545	0/1:12,8:19:99:237,0,167	0/1:22,10:32:99:334,0,366	0/1:6,2:8:64.48:64,0,96
chr10	34148513	.	TTC	T	5426.26	PASS	AB=0.799;AC=25;AF=0.446;AN=56;BaseQRankSum=6.928;DP=642;FS=0.350;HRun=0;HaplotypeScore=305.3405;InbreedingCoeff=-0.5223;MQ=36.71;MQ0=15;MQRankSum=-3.028;QD=11.62;ReadPosRankSum=-4.334;VQSLOD=2.8881;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:21,1:22:57.92:58,0,579	0/1:7,3:10:89.85:96,0,90	0/0:37,0:7:12.91:0,13,233	0/0:63,0:14:21.72:0,22,383	0/0:26,0:23:12.30:0,12,682	0/1:18,1:19:66.44:66,0,697	0/1:13,1:13:17.79:18,0,458	0/0:30,0:25:15.39:0,15,324	0/0:19,0:19:24.18:0,24,526	0/1:18,5:22:99:166,0,339	0/1:21,6:27:70.33:70,0,397	1/1:14,11:25:36.38:540,36,0	0/1:10,3:12:99:110,0,141	0/1:13,13:26:99:510,0,180	0/1:14,9:23:99:352,0,217	0/1:19,8:27:99:298,0,200	0/1:15,0:14:14.20:14,0,406	0/1:8,3:10:72.16:72,0,81	0/1:16,2:16:44.54:45,0,314	0/1:14,10:24:99:291,0,207	0/1:4,1:5:21.42:79,0,21	0/1:8,10:18:57.30:397,0,57	1/1:14,16:29:54.29:795,54,0	0/1:13,7:19:99:214,0,169	0/1:24,15:39:99:530,0,448	0/1:11,8:19:99:257,0,191	0/1:21,11:32:99:382,0,399	0/1:5,2:7:58.88:65,0,59
chr10	34148515	.	C	CTT	8016.32	PASS	AB=0.932;AC=27;AF=0.482;AN=56;BaseQRankSum=4.530;DP=641;FS=2.376;HRun=3;HaplotypeScore=291.7745;InbreedingCoeff=-0.6484;MQ=36.94;MQ0=15;MQRankSum=-6.049;QD=15.04;ReadPosRankSum=-4.170;VQSLOD=0.3205;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:19,2:23:99:264,0,377	0/1:8,0:9:99:182,0,115	0/0:37,0:7:15.05:0,15,214	0/0:57,0:14:26.15:0,26,312	0/1:25,0:22:86.47:86,0,495	0/1:17,5:22:99:274,0,550	0/1:13,1:12:35.26:35,0,361	0/1:38,0:34:99:144,0,420	0/1:19,0:19:89.33:89,0,262	0/1:21,1:22:99:326,0,296	0/1:23,1:25:99:222,0,405	1/1:26,0:26:37.94:318,38,0	0/1:12,2:14:99:325,0,126	0/1:23,1:24:99:687,0,159	0/1:19,1:21:99:544,0,208	0/1:24,2:28:99:653,0,261	0/0:14,0:13:17.03:0,17,330	0/1:8,0:7:84.82:104,0,85	0/1:19,0:17:79.35:79,0,361	0/1:26,0:26:99:432,0,249	0/1:4,1:5:30.23:135,0,30	0/1:14,0:17:70.69:573,0,71	1/1:30,0:29:53.42:474,53,0	0/1:19,1:19:99:102,0,113	0/1:34,1:39:99:1055,0,401	0/1:20,0:20:99:312,0,239	0/1:31,0:31:99:447,0,456	0/1:6,0:7:62.95:153,0,63
chr10	34148547	.	T	TCC	238.28	PASS	AB=0.852;AC=4;AF=0.071;AN=56;BaseQRankSum=-0.800;DP=563;FS=0.661;HRun=0;HaplotypeScore=267.1135;InbreedingCoeff=-0.0779;MQ=38.00;MQ0=6;MQRankSum=-1.815;QD=3.67;ReadPosRankSum=0.414;VQSLOD=2.4435;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:34.02:0,34,317	0/0:9,0:9:26.67:0,27,291	0/0:14,0:5:15.04:0,15,207	0/0:11,0:5:11.99:0,12,151	0/1:16,5:18:99:115,0,132	0/0:22,0:22:8.15:0,8,243	0/0:13,0:11:19.86:0,20,108	0/0:37,0:29:74.42:0,74,911	0/1:14,7:21:99:168,0,125	0/0:17,0:17:28.39:0,28,392	0/0:21,0:21:19.68:0,20,391	0/0:22,0:22:56.55:0,57,704	0/0:19,0:18:35.21:0,35,573	0/0:24,0:24:63.28:0,63,553	0/0:24,0:24:66.27:0,66,677	0/0:29,0:29:64.80:0,65,815	0/1:14,3:16:53.78:54,0,201	0/0:11,0:10:26.96:0,27,303	0/0:24,0:20:50.70:0,51,628	0/0:26,0:26:66.03:0,66,680	0/1:6,0:6:4.09:4,0,94	0/0:18,0:18:52.84:0,53,476	0/0:21,0:20:50.36:0,50,608	0/0:20,0:20:26.21:0,26,584	0/0:42,0:42:49.26:0,49,944	0/0:20,0:20:53.26:0,53,515	0/0:30,0:30:85.59:0,86,815	0/0:4,0:4:10.97:0,11,72
chr10	34148548	.	T	TTCCTTC	2552.55	PASS	AB=0.981;AC=22;AF=0.393;AN=56;BaseQRankSum=8.468;DP=567;FS=15.788;HRun=0;HaplotypeScore=296.6587;InbreedingCoeff=-0.4560;MQ=38.14;MQ0=7;MQRankSum=-3.930;QD=6.05;ReadPosRankSum=10.117;VQSLOD=0.2523;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:20,0:20:15.42:15,0,131	0/1:9,0:9:42.14:42,0,162	0/0:14,0:5:14.63:0,15,243	0/0:10,0:5:9.03:0,9,180	0/1:17,5:19:36.62:408,0,37	0/1:22,0:22:17.21:304,0,17	0/1:13,0:11:23.92:24,0,37	0/0:38,0:30:37.73:0,38,818	1/1:13,7:20:4.62:699,5,0	0/1:17,0:17:60.78:61,0,179	0/1:22,0:22:41.60:42,0,204	0/1:22,0:22:22.08:22,0,542	0/1:19,0:18:15.64:16,0,338	0/1:24,0:24:99:132,0,137	0/1:25,0:25:75.94:76,0,283	0/1:29,0:29:99:103,0,377	0/1:14,2:16:99:175,0,149	0/0:11,0:10:1.98:0,2,158	0/0:25,0:20:18.48:0,18,392	0/1:26,0:26:45.02:45,0,284	0/0:6,0:6:0.08:0,0,75	0/1:18,0:18:99:101,0,144	0/0:22,0:21:1.71:0,2,323	0/0:19,0:19:44.74:0,45,674	0/1:42,0:42:99:259,0,377	0/1:20,0:20:79.81:80,0,248	0/1:30,0:30:60.07:60,0,233	1/1:5,0:5:8.61:46,9,0
chr10	34153154	.	GC	G	1960.45	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=8.978;DP=731;FS=0.000;HRun=1;HaplotypeScore=65.7934;InbreedingCoeff=0.9980;MQ=80.34;MQ0=0;MQRankSum=-4.918;QD=36.99;ReadPosRankSum=1.442;VQSLOD=3.9971;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,53:53:99:2055,147,0	0/0:8,0:8:24.08:0,24,384	0/0:24,0:24:71.45:0,71,1070	0/0:16,0:16:47.77:0,48,677	0/0:25,0:25:75.24:0,75,1176	0/0:22,0:22:66.19:0,66,1006	0/0:21,0:21:63.19:0,63,979	0/0:36,0:36:99:0,108,1726	0/0:22,0:22:66.19:0,66,1004	0/0:30,0:30:90.27:0,90,1411	0/0:22,0:22:66.21:0,66,1031	0/0:23,0:23:69.21:0,69,1074	0/0:34,0:34:99:0,102,1557	0/0:30,0:30:90.31:0,90,1422	0/0:33,0:33:99:0,99,1578	0/0:44,0:44:99:0,132,2078	0/0:27,0:27:81.26:0,81,1268	0/0:20,0:20:60.17:0,60,928	0/0:22,0:22:66.23:0,66,1056	0/0:27,0:27:78.27:0,78,1247	0/0:26,0:26:78.21:0,78,1195	0/0:19,0:19:57.17:0,57,863	0/0:28,0:28:78.27:0,78,1244	0/0:22,0:22:66.23:0,66,1055	0/0:19,0:19:57.17:0,57,865	0/0:35,0:35:99:0,105,1679	0/0:27,0:27:81.26:0,81,1268	0/0:16,0:16:48.16:0,48,763
chr10	34154219	.	ACTC	A	296.26	PASS	AB=1.000;AC=4;AF=0.071;AN=56;BaseQRankSum=4.327;DP=472;FS=3.042;HRun=0;HaplotypeScore=78.3259;InbreedingCoeff=0.5371;MQ=70.72;MQ0=3;MQRankSum=-0.070;QD=4.78;ReadPosRankSum=-0.935;VQSLOD=1.5619;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:5,30:37:17.76:385,18,0	0/0:8,0:8:18.05:0,18,299	0/1:14,0:9:9.86:10,0,232	0/1:11,0:9:0.29:0,0,102	0/0:14,0:16:26.60:0,27,239	0/0:18,0:19:42.98:0,43,212	0/0:30,0:31:42.53:0,43,365	0/0:17,0:17:35.72:0,36,459	0/0:20,0:20:23.29:0,23,206	0/0:9,0:9:23.73:0,24,305	0/0:10,0:10:27.06:0,27,399	0/0:13,0:14:34.30:0,34,485	0/0:13,0:13:34.30:0,34,449	0/0:16,0:16:41.70:0,42,634	0/0:26,0:26:77.61:0,78,1150	0/0:23,0:23:64.70:0,65,1008	0/0:31,0:32:67.27:0,67,343	0/0:27,0:27:75.15:0,75,1218	0/0:14,0:14:42.08:0,42,554	0/0:12,0:12:32.56:0,33,468	0/0:10,0:10:30.04:0,30,393	0/0:7,0:7:21:0,21,309	0/0:12,0:12:36.03:0,36,492	0/0:17,0:17:43.35:0,43,624	0/0:18,0:18:48.12:0,48,766	0/0:17,0:17:42.10:0,42,674	0/0:16,0:16:34.34:0,34,501	0/0:6,0:6:15.03:0,15,226
chr10	34154221	.	TCC	T	2129.97	PASS	AB=0.877;AC=13;AF=0.232;AN=56;BaseQRankSum=4.313;DP=476;FS=12.886;HRun=12;HaplotypeScore=64.2966;InbreedingCoeff=0.6686;MQ=70.64;MQ0=3;MQRankSum=-0.769;QD=12.10;ReadPosRankSum=7.314;VQSLOD=0.2067;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:37,0:37:17.50:73,18,0	0/0:5,0:7:17.51:0,18,190	0/1:14,0:9:9.75:10,0,121	0/0:11,0:9:8.85:0,9,61	0/1:7,10:17:20.55:188,0,21	1/1:6,11:17:39.07:396,39,0	1/1:10,17:30:50.30:533,50,0	0/0:17,0:17:14.75:0,15,181	1/1:6,14:20:36.01:366,36,0	0/1:9,0:9:15.29:15,0,97	0/0:9,0:10:17.51:0,18,174	0/0:14,0:14:23.74:0,24,258	0/0:12,0:13:20.94:0,21,244	0/0:13,0:16:35.06:0,35,406	0/0:26,0:28:65.73:0,66,623	0/0:22,0:22:52.08:0,52,613	1/1:6,26:32:72.13:730,72,0	0/0:25,0:25:68.51:0,69,759	0/0:14,0:17:35.40:0,35,309	0/0:12,0:12:9.55:0,10,191	0/0:11,0:11:17.84:0,18,204	0/0:7,0:8:15.02:0,15,181	0/0:11,0:12:17.51:0,18,189	0/0:17,0:17:37.45:0,37,412	0/0:20,0:20:38.91:0,39,433	0/0:18,0:18:27.07:0,27,362	0/0:12,0:16:31.85:0,32,281	0/0:4,0:6:8.52:0,9,97
chr10	34156009	.	GA	G	6181.38	PASS	AB=0.600;AC=47;AF=0.839;AN=56;BaseQRankSum=1.151;DP=679;FS=4.561;HRun=14;HaplotypeScore=81.5342;InbreedingCoeff=0.1687;MQ=65.24;MQ0=6;MQRankSum=-0.878;QD=10.02;ReadPosRankSum=3.974;VQSLOD=4.6247;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:12,0:29:37.17:109,37,0	1/1:2,5:7:8.89:62,9,0	0/0:34,1:12:0.30:0,0,90	0/0:27,0:10:1.32:0,1,26	1/1:4,20:28:66.45:412,66,0	1/1:5,20:28:23.78:292,24,0	1/1:5,5:11:13.51:88,14,0	1/1:16,20:36:51.42:339,51,0	1/1:4,18:26:40.85:250,41,0	0/1:12,17:29:55.94:220,0,56	1/1:8,15:25:16.82:236,17,0	1/1:4,16:21:46.24:304,46,0	0/1:4,17:21:1.38:205,0,1	1/1:9,8:19:7.32:162,7,0	1/1:6,24:32:59.04:387,59,0	1/1:5,17:24:17.79:251,18,0	1/1:7,15:22:34.93:233,35,0	1/1:8,16:26:39.74:258,40,0	0/1:10,12:22:55.91:175,0,56	1/1:11,14:28:55.44:344,55,0	1/1:8,11:22:39.04:227,39,0	0/1:8,10:21:22.92:128,0,23	1/1:11,18:31:18.17:371,18,0	1/1:6,15:23:17.13:264,17,0	0/1:4,9:16:1.01:114,0,1	1/1:10,9:22:9.99:181,10,0	1/1:8,24:35:65.49:429,65,0	1/1:2,7:9:20.79:144,21,0
chr10	34156934	.	CA	C	11230.57	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=13.771;DP=591;FS=14.057;HRun=1;HaplotypeScore=91.2930;InbreedingCoeff=0.9940;MQ=86.79;MQ0=1;MQRankSum=-4.273;QD=30.94;ReadPosRankSum=2.122;VQSLOD=3.3724;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,52:52:99:1504,108,0	1/1:0,8:8:12.04:167,12,0	0/0:24,0:24:72.20:0,72,1022	0/0:26,0:26:75.04:0,75,1067	0/0:19,0:19:51.12:0,51,732	0/0:31,0:31:93.29:0,93,1440	0/0:25,0:25:74.82:0,75,1080	1/1:1,30:31:89.63:1053,90,0	0/0:24,0:24:72.23:0,72,1124	1/1:0,20:20:59.64:644,60,0	1/1:8,13:21:44.77:535,45,0	0/0:26,0:26:78.21:0,78,1170	1/1:0,18:18:33:459,33,0	1/1:0,25:25:57.14:773,57,0	1/1:7,17:23:71.87:871,72,0	1/1:7,19:26:77.84:932,78,0	0/0:25,0:25:75.23:0,75,1173	1/1:2,10:11:32.97:413,33,0	1/1:2,10:12:32.90:403,33,0	1/1:0,20:20:44.94:594,45,0	1/1:0,13:13:21.07:293,21,0	1/1:0,18:18:33.11:460,33,0	0/0:16,0:16:48.12:0,48,687	0/0:12,0:12:36.11:0,36,548	1/1:0,8:8:24.08:334,24,0	1/1:0,22:22:59.64:640,60,0	1/1:8,16:24:68.95:821,69,0	1/1:0,8:8:24.08:334,24,0
chr10	34157130	.	TAAG	T	592.12	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.916;DP=548;FS=3.741;HRun=0;HaplotypeScore=100.7996;InbreedingCoeff=0.9852;MQ=77.46;MQ0=0;MQRankSum=-5.024;QD=29.61;ReadPosRankSum=1.286;VQSLOD=3.7075;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,17:20:42.14:687,42,0	0/0:8,0:8:18.06:0,18,414	0/0:14,0:15:41.97:0,42,809	0/0:11,0:11:30.10:0,30,665	0/0:25,0:25:66.19:0,66,1420	0/0:30,0:30:87.30:0,87,1974	0/0:16,0:16:45.15:0,45,1037	0/0:35,0:35:99:0,99,2167	0/0:28,0:28:84.29:0,84,1926	0/0:26,0:26:75.26:0,75,1716	0/0:17,0:17:48.16:0,48,1094	0/0:26,0:26:78.27:0,78,1797	0/0:21,0:21:57.20:0,57,1303	0/0:19,0:19:48.16:0,48,1077	0/0:19,0:19:45.15:0,45,1025	0/0:15,0:15:39.13:0,39,899	0/0:28,0:28:84.29:0,84,1937	0/0:13,0:13:33.11:0,33,759	0/0:15,0:15:45.15:0,45,1025	0/0:24,0:24:69.24:0,69,1564	0/0:9,0:9:24.08:0,24,553	0/0:15,0:15:39.13:0,39,897	0/0:23,0:23:66.23:0,66,1506	0/0:20,0:20:60.21:0,60,1357	0/0:10,0:10:24.08:0,24,553	0/0:18,0:18:51.18:0,51,1176	0/0:29,0:29:69.04:0,69,1532	0/0:13,0:13:24.08:0,24,554
chr10	34157188	.	A	AC	6408.16	PASS	AB=0.991;AC=37;AF=0.661;AN=56;BaseQRankSum=-6.161;DP=514;FS=1.742;HRun=7;HaplotypeScore=57.0665;InbreedingCoeff=0.8047;MQ=81.67;MQ0=2;MQRankSum=-1.794;QD=18.36;ReadPosRankSum=0.062;VQSLOD=4.4900;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:5,0:5:0:0,0,0	1/1:1,6:7:14.96:161,15,0	0/1:36,0:25:22.44:22,0,205	0/1:34,0:21:38.35:38,0,86	0/0:16,0:16:39.05:0,39,370	0/0:27,0:27:72.34:0,72,697	0/0:17,0:18:47.05:0,47,426	1/1:7,14:21:42.07:456,42,0	0/0:22,0:22:57.02:0,57,527	1/1:2,16:18:42.11:493,42,0	1/1:2,18:20:48.04:560,48,0	0/0:17,0:17:42.04:0,42,395	1/1:1,16:17:33.10:398,33,0	1/1:1,21:22:45.14:540,45,0	1/1:2,16:18:27.08:326,27,0	1/1:3,13:16:36.11:433,36,0	0/0:30,0:30:81.09:0,81,768	1/1:2,11:13:21.06:253,21,0	1/1:1,13:14:41.97:435,42,0	1/1:1,13:14:35.95:382,36,0	1/1:4,0:18:37.34:189,37,0	1/1:1,14:15:32.93:360,33,0	0/0:18,0:18:45.03:0,45,420	0/0:17,0:17:48.08:0,48,463	1/1:1,5:6:12.04:145,12,0	1/1:4,18:22:56.38:654,56,0	1/1:5,17:22:33.04:380,33,0	1/1:2,8:10:15.05:181,15,0
chr10	34157284	.	T	TA	507.84	PASS	AB=0.983;AC=10;AF=0.179;AN=56;BaseQRankSum=-0.772;DP=303;FS=14.322;HRun=12;HaplotypeScore=44.7946;InbreedingCoeff=0.5162;MQ=80.50;MQ0=0;MQRankSum=4.648;QD=5.71;ReadPosRankSum=-2.458;VQSLOD=-0.0141;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:0,0:3:4.07:0,4,12	0/0:5,0:5:14.90:0,15,108	0/1:15,0:15:11.87:12,0,16	0/1:9,0:7:8.43:19,0,8	0/0:10,0:11:14.88:0,15,130	0/0:19,0:20:43.78:0,44,312	0/0:9,0:10:25.90:0,26,181	0/0:16,0:16:14.85:0,15,108	0/0:17,0:17:26.71:0,27,191	0/0:8,0:8:14.89:0,15,109	0/0:6,0:9:18.03:0,18,105	1/1:9,8:16:27.02:254,27,0	0/1:12,1:14:0.31:0,0,150	0/0:7,0:7:8.94:0,9,66	0/0:7,0:8:10.95:0,11,71	0/1:8,0:8:0.28:0,0,73	0/0:23,0:23:40.62:0,41,282	0/0:5,0:5:8.91:0,9,65	0/0:5,0:5:11.93:0,12,88	0/0:17,0:17:17.84:0,18,131	0/0:4,0:4:5.94:0,6,44	0/0:8,0:8:17.90:0,18,131	1/1:10,4:14:17.96:157,18,0	1/1:3,9:12:9.14:210,9,0	0/0:10,0:11:19.84:0,20,134	0/0:8,0:8:20.88:0,21,153	0/0:12,0:12:20.50:0,20,138	0/0:5,0:6:13.94:0,14,93
chr10	34157339	.	T	TAAA	1893.56	PASS	AB=1.000;AC=24;AF=0.632;AN=38;BaseQRankSum=-3.906;DP=176;FS=5.891;HRun=14;HaplotypeScore=55.7460;InbreedingCoeff=0.4134;MQ=81.03;MQ0=2;MQRankSum=-0.020;QD=12.22;ReadPosRankSum=3.001;VQSLOD=0.5075;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	1/1:1,0:1:2.22:7,2,0	0/0:12,0:6:0.98:0,1,11	0/1:15,0:10:16.35:16,0,20	1/1:25,4:31:72:828,72,0	1/1:5,15:27:33:415,33,0	1/1:3,2:7:8.95:94,9,0	./.	1/1:7,7:16:14.96:170,15,0	./.	0/1:2,0:2:3.58:4,0,5	1/1:6,0:16:9.97:23,10,0	./.	./.	0/0:1,0:1:1.25:0,1,3	0/0:2,0:2:0.84:0,1,2	1/1:8,10:20:27.06:397,27,0	./.	0/0:2,0:2:3.78:0,4,10	0/0:1,0:1:2.50:0,2,9	./.	1/1:1,0:1:0.47:1,0,0	1/1:1,0:12:12.67:43,13,0	1/1:3,0:5:2.49:5,2,0	./.	1/1:2,0:2:1.25:3,1,0	0/0:2,0:2:2.51:0,3,8	./.
chr10	34158281	.	AT	A	6827.94	PASS	AB=0.565;AC=35;AF=0.625;AN=56;BaseQRankSum=13.720;DP=532;FS=2.655;HRun=9;HaplotypeScore=82.0264;InbreedingCoeff=0.8836;MQ=62.31;MQ0=2;MQRankSum=0.608;QD=19.34;ReadPosRankSum=4.780;VQSLOD=5.2001;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,31:34:65.63:604,66,0	1/1:2,7:8:18:165,18,0	0/0:8,0:6:6.15:0,6,150	0/0:4,0:3:3.01:0,3,35	0/0:40,0:40:99:0,104,1163	0/0:11,0:11:29.82:0,30,295	0/0:19,0:19:48.14:0,48,552	1/1:5,21:26:63.02:571,63,0	0/0:17,0:17:45.13:0,45,519	1/1:2,17:18:45:409,45,0	1/1:1,16:17:26.97:243,27,0	0/0:24,0:24:72.21:0,72,831	1/1:0,19:19:48.03:439,48,0	1/1:3,16:19:36.01:329,36,0	1/1:2,19:21:47.68:432,48,0	1/1:2,21:23:39.01:357,39,0	0/0:21,0:21:53.83:0,54,599	0/1:3,10:13:13.61:144,0,14	1/1:5,17:20:48.02:438,48,0	1/1:4,27:30:62.57:627,63,0	1/1:0,15:15:36.02:330,36,0	1/1:3,19:21:44.97:402,45,0	0/0:16,0:16:42.54:0,43,456	0/0:19,0:19:54.15:0,54,613	1/1:2,13:15:24.01:220,24,0	1/1:2,16:17:45.02:412,45,0	1/1:1,14:15:39.01:357,39,0	1/1:2,13:15:39:351,39,0
chr10	34158834	.	AACT	A	13343.47	PASS	AB=0.688;AC=35;AF=0.625;AN=56;BaseQRankSum=15.848;DP=536;FS=20.288;HRun=0;HaplotypeScore=131.3956;InbreedingCoeff=0.9189;MQ=45.06;MQ0=9;MQRankSum=-15.196;QD=40.19;ReadPosRankSum=-1.711;VQSLOD=4.1280;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,28:33:62.89:1063,63,0	1/1:1,11:12:33.10:553,33,0	0/0:29,0:16:45.15:0,45,1030	0/0:22,0:12:33.11:0,33,755	0/0:18,0:18:54.17:0,54,1197	0/0:15,0:15:45.15:0,45,1064	0/0:12,0:12:30.10:0,30,676	1/1:10,19:28:63.14:1043,63,0	0/0:18,0:18:51.15:0,51,1130	1/1:1,23:23:69.24:1207,69,0	1/1:0,26:26:50.87:667,51,0	0/0:27,0:27:78.27:0,78,1788	1/1:0,11:11:32.99:512,33,0	1/1:1,16:17:51.17:894,51,0	1/1:4,17:21:54.18:950,54,0	1/1:2,19:21:57.20:1002,57,0	0/0:28,0:28:78.25:0,78,1716	0/1:6,5:11:40.88:267,0,41	1/1:2,11:12:36.12:621,36,0	1/1:4,21:25:56.48:805,56,0	1/1:2,5:7:14.76:197,15,0	1/1:3,15:18:38.92:522,39,0	0/0:18,0:18:54.19:0,54,1276	0/0:17,0:17:42.12:0,42,945	1/1:0,16:16:39.05:620,39,0	1/1:1,24:25:75.22:1281,75,0	1/1:2,16:18:51.17:891,51,0	1/1:2,3:5:15.05:248,15,0
chr10	34158843	.	CA	C	11410.03	PASS	AB=0.533;AC=35;AF=0.625;AN=56;BaseQRankSum=16.732;DP=551;FS=16.323;HRun=2;HaplotypeScore=128.3717;InbreedingCoeff=0.9165;MQ=56.88;MQ0=4;MQRankSum=-14.662;QD=33.76;ReadPosRankSum=-0.893;VQSLOD=2.7691;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,28:30:72.23:929,72,0	1/1:0,12:12:36.12:462,36,0	0/0:30,0:22:60.13:0,60,788	0/0:22,0:18:51.07:0,51,687	0/0:21,0:21:60.20:0,60,897	0/0:15,0:15:42.13:0,42,610	0/0:11,0:11:33.11:0,33,495	1/1:4,23:27:69.21:881,69,0	0/0:23,0:23:69.18:0,69,954	1/1:2,27:28:81.24:1029,81,0	1/1:0,28:28:60.20:777,60,0	0/0:26,0:26:75.25:0,75,1122	1/1:1,12:13:36.11:455,36,0	1/1:0,19:19:54.17:694,54,0	1/1:0,18:18:51.17:661,51,0	1/1:0,22:22:60.14:770,60,0	0/0:28,0:28:81.21:0,81,1161	0/1:1,7:8:15.07:248,0,15	1/1:2,12:13:36.12:464,36,0	1/1:0,26:26:65.72:855,66,0	1/1:0,7:7:17.91:233,18,0	1/1:0,19:19:48.16:622,48,0	0/0:21,0:21:60.20:0,60,898	0/0:16,0:16:42.14:0,42,628	1/1:1,17:18:45.15:583,45,0	1/1:1,24:25:72.23:930,72,0	1/1:1,19:20:54.18:700,54,0	1/1:0,3:3:9.03:117,9,0
chr10	34159254	.	GA	G	4767.21	PASS	AB=0.692;AC=35;AF=0.625;AN=56;BaseQRankSum=4.740;DP=625;FS=0.418;HRun=14;HaplotypeScore=149.1852;InbreedingCoeff=0.3624;MQ=67.05;MQ0=0;MQRankSum=-1.104;QD=9.91;ReadPosRankSum=4.419;VQSLOD=2.8732;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:34.05:0,34,412	1/1:2,6:9:16.80:109,17,0	0/1:17,1:16:26.09:26,0,91	0/1:8,1:8:11.57:12,0,22	0/0:13,0:43:62.46:0,62,319	0/0:3,0:16:17.04:0,17,86	0/0:3,0:11:15.45:0,15,75	0/1:15,10:26:34.28:84,0,34	0/0:7,0:21:25.86:0,26,147	1/1:8,24:35:14.64:341,15,0	1/1:8,17:27:31.18:265,31,0	1/1:8,11:19:15.69:205,16,0	1/1:9,17:27:46.53:314,47,0	0/1:4,8:12:7.11:102,0,7	0/1:10,19:30:73.73:245,0,74	1/1:6,20:29:59.62:388,60,0	0/0:8,0:26:34.34:0,34,183	1/1:3,7:10:17.79:123,18,0	0/1:9,5:15:43.62:79,0,44	1/1:4,19:26:51.53:340,52,0	1/1:2,11:14:19.01:127,19,0	0/1:8,16:25:8.14:255,0,8	1/1:4,23:27:34.59:383,35,0	1/1:4,13:16:32.67:226,33,0	0/1:6,18:25:6.10:244,0,6	0/1:9,23:33:2.71:362,0,3	1/1:7,22:30:30.63:348,31,0	1/1:4,12:17:28.79:191,29,0
chr10	34160261	.	T	TGTGCATCGTCAACAG	82167.52	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-3.968;DP=650;FS=8.998;HRun=0;HaplotypeScore=221.2468;InbreedingCoeff=0.9995;MQ=79.97;MQ0=2;MQRankSum=-15.026;QD=155.33;ReadPosRankSum=2.298;VQSLOD=3.8051;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:69.24:0,69,2823	1/1:7,3:11:30.10:1820,30,0	0/0:30,0:30:66.18:0,66,2399	0/0:26,0:26:63.22:0,63,2299	1/1:17,13:34:66.23:3664,66,0	1/1:15,9:26:63.22:3904,63,0	1/1:12,5:17:45.15:2414,45,0	1/1:29,1:34:93.32:4990,93,0	1/1:13,10:24:63.22:4107,63,0	1/1:14,9:25:72.25:4259,72,0	1/1:13,12:27:66.23:3871,66,0	0/0:12,0:12:36.12:0,36,1449	1/1:7,10:21:48.16:3261,48,0	1/1:17,10:26:75.26:4386,75,0	1/1:8,14:24:63.22:4184,63,0	1/1:17,16:39:90.31:5980,90,0	1/1:10,6:18:45.15:3150,45,0	1/1:6,4:12:26.88:1801,27,0	1/1:10,11:25:69.24:3766,69,0	1/1:18,14:37:96.24:5933,96,0	1/1:9,3:16:33.11:1835,33,0	1/1:7,10:20:45.15:2592,45,0	0/0:17,0:17:45.15:0,45,1902	0/0:13,0:13:36.12:0,36,1477	1/1:4,10:15:39.13:2603,39,0	1/1:17,13:35:99:6299,105,0	1/1:14,10:27:69.24:4641,69,0	1/1:5,9:13:39.13:2709,39,0
chr10	34163053	.	ATAGCT	A	17429.35	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=17.711;DP=538;FS=1.053;HRun=0;HaplotypeScore=122.1936;InbreedingCoeff=0.9823;MQ=67.67;MQ0=1;MQRankSum=-15.415;QD=55.68;ReadPosRankSum=0.602;VQSLOD=5.3138;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:78.27:0,78,2497	1/1:1,12:13:30.10:668,30,0	0/0:25,0:23:66.23:0,66,2003	0/0:12,0:11:33.11:0,33,900	0/0:32,0:32:93.32:0,93,2997	0/0:29,0:29:87.30:0,87,2714	0/0:8,0:8:24.08:0,24,752	1/1:4,19:23:57.18:1212,57,0	0/0:17,0:17:51.16:0,51,1575	1/1:1,28:28:81.28:1777,81,0	1/1:0,19:19:54.18:1174,54,0	0/0:20,0:20:60.21:0,60,1939	1/1:1,23:24:60.21:1337,60,0	1/1:3,11:15:33.11:735,33,0	1/1:0,13:13:36.12:802,36,0	1/1:1,22:23:60.21:1309,60,0	0/0:18,0:18:54.19:0,54,1724	1/1:1,12:13:36.12:802,36,0	1/1:3,10:13:30.10:626,30,0	1/1:1,18:19:51.11:1043,51,0	1/1:2,3:4:6.02:123,6,0	1/1:0,22:22:57.20:1270,57,0	0/0:22,0:22:66.23:0,66,2099	0/0:15,0:15:42.11:0,42,1255	1/1:0,18:16:45.15:1003,45,0	1/1:2,24:26:72.23:1543,72,0	1/1:5,27:31:75.26:1670,75,0	1/1:0,5:5:15.05:334,15,0
chr10	34163660	.	A	AG	15718.46	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=1.883;DP=689;FS=4.384;HRun=2;HaplotypeScore=93.9476;InbreedingCoeff=0.9962;MQ=72.28;MQ0=0;MQRankSum=-1.507;QD=36.55;ReadPosRankSum=1.705;VQSLOD=5.2967;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,114,1326	1/1:0,9:9:24.03:320,24,0	0/0:18,0:18:34.98:0,35,493	0/0:11,0:10:14.18:0,14,176	0/0:28,0:28:81.20:0,81,934	0/0:25,0:25:69.19:0,69,826	0/0:11,0:11:33.09:0,33,396	1/1:3,29:32:90.29:1277,90,0	0/0:26,0:26:73.41:0,73,853	1/1:2,33:35:99:1305,99,0	1/1:0,34:34:99:1343,99,0	0/0:24,0:24:66.19:0,66,798	1/1:0,27:27:69.23:991,69,0	1/1:1,24:25:60.20:862,60,0	1/1:1,27:28:72.24:1034,72,0	1/1:0,23:23:60.20:862,60,0	0/0:30,0:29:90.24:0,90,1065	1/1:1,21:22:45.15:642,45,0	1/1:6,8:14:30.56:399,31,0	1/1:1,29:30:81.20:1138,81,0	1/1:0,31:31:63.21:905,63,0	1/1:1,24:25:68.98:913,69,0	0/0:26,0:26:78.20:0,78,938	0/0:19,0:19:57.11:0,57,649	1/1:1,18:19:51.17:733,51,0	1/1:1,32:33:93.24:1240,93,0	1/1:3,32:35:99:1452,105,0	1/1:0,8:8:21.07:302,21,0
chr10	34165703	.	A	AT	2780.97	PASS	AB=0.812;AC=17;AF=0.304;AN=56;BaseQRankSum=14.348;DP=634;FS=0.000;HRun=4;HaplotypeScore=101.8487;InbreedingCoeff=-0.4346;MQ=76.57;MQ0=0;MQRankSum=-8.513;QD=7.15;ReadPosRankSum=0.912;VQSLOD=0.1369;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:63.21:0,63,874	0/1:9,4:13:99:137,0,296	0/0:28,0:27:61.82:0,62,801	0/1:22,0:20:6.47:6,0,293	0/0:40,0:41:99:0,113,1667	0/0:31,0:31:93.31:0,93,1296	0/0:12,0:12:33.11:0,33,458	0/1:34,7:41:99:219,0,1117	0/0:19,0:19:57.19:0,57,795	0/1:22,4:26:99:100,0,830	0/1:18,2:20:29.73:30,0,655	0/0:12,0:12:32.29:0,32,458	0/1:19,6:25:99:154,0,685	0/1:19,13:32:99:403,0,702	0/1:16,8:24:99:248,0,561	0/1:11,5:16:99:135,0,400	0/0:20,0:20:57.19:0,57,791	0/1:8,3:11:99:102,0,298	0/0:16,1:17:5.80:0,6,524	0/1:23,12:35:99:398,0,841	0/1:5,1:6:11.93:12,0,114	0/1:19,10:29:99:319,0,712	0/0:33,0:33:99:0,99,1370	0/0:11,0:11:33.11:0,33,462	0/1:18,9:27:99:326,0,654	0/1:17,6:23:99:201,0,643	0/1:24,3:27:51.39:51,0,921	0/1:9,3:12:98.52:99,0,341
chr10	34167221	.	C	CT	860.07	PASS	AB=0.868;AC=23;AF=0.426;AN=54;BaseQRankSum=2.245;DP=335;FS=14.356;HRun=14;HaplotypeScore=51.8065;InbreedingCoeff=0.3154;MQ=53.59;MQ0=13;MQRankSum=-1.086;QD=4.73;ReadPosRankSum=-2.544;VQSLOD=-0.0316;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:10,7:18:12.88:82,13,0	./.	0/1:12,0:7:2.17:2,0,30	0/1:5,0:3:0:0,0,0	1/1:18,10:28:39.71:315,40,0	0/1:4,4:8:7.27:67,0,7	1/1:2,3:5:9:79,9,0	0/0:20,0:18:4.29:0,4,131	0/1:5,4:9:1.31:107,0,1	0/0:12,0:10:5.78:0,6,38	0/0:20,1:22:7.15:0,7,158	1/1:9,0:10:2.84:14,3,0	0/1:9,2:11:11.86:12,0,62	0/0:9,0:7:13.05:0,13,80	0/1:10,1:11:11.63:12,0,62	0/0:13,0:13:29.46:0,29,192	1/1:7,4:7:14.95:124,15,0	0/1:15,0:14:7.35:7,0,50	0/1:8,2:8:34.95:35,0,58	0/1:10,1:12:17.10:17,0,91	0/0:13,1:13:4.66:0,5,98	0/0:7,0:8:10.86:0,11,63	1/1:4,3:8:14.75:105,15,0	1/1:3,1:8:8.47:54,8,0	0/0:15,0:14:26.55:0,27,173	0/0:12,0:11:17.62:0,18,115	0/0:12,0:13:16.37:0,16,101	0/0:9,1:12:4.31:0,4,139
chr10	34168990	.	ATGGGG	A	415.55	PASS	AC=2;AF=0.077;AN=26;BaseQRankSum=5.120;DP=429;FS=2.955;HRun=0;HaplotypeScore=62.8736;InbreedingCoeff=0.6218;MQ=20.65;MQ0=240;MQRankSum=-3.175;QD=25.97;ReadPosRankSum=1.269;VQSLOD=3.3525;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/0:16,0:16:41.95:0,42,1334	./.	./.	0/0:30,0:20:24.08:0,24,794	./.	./.	./.	./.	0/0:21,0:13:39.13:0,39,1265	0/0:29,0:23:27.09:0,27,896	./.	0/0:19,0:1:0:0,0,0	0/0:10,0:1:3.01:0,3,100	./.	./.	./.	./.	./.	0/0:50,0:44:99:0,108,3512	./.	0/0:22,0:17:20.91:0,21,696	1/1:3,13:11:30.10:502,30,0	./.	0/0:18,0:16:39.61:0,40,1274	0/0:12,0:5:15.05:0,15,495	0/0:19,0:3:3.01:0,3,62	0/0:16,0:8:5.86:0,6,199
chr10	34168996	.	ATTG	A	285.82	PASS	AC=4;AF=0.143;AN=28;BaseQRankSum=5.251;DP=420;FS=1.273;HRun=0;HaplotypeScore=58.9031;InbreedingCoeff=0.6454;MQ=20.52;MQ0=239;MQRankSum=-3.246;QD=15.88;ReadPosRankSum=1.407;VQSLOD=3.2520;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	0/0:16,0:16:42.01:0,42,1032	./.	./.	0/0:27,0:18:30.10:0,30,663	./.	./.	./.	./.	0/0:19,0:13:39.13:0,39,961	0/0:27,0:22:30.10:0,30,700	./.	0/0:17,0:1:0:0,0,0	0/0:10,0:1:3.01:0,3,74	./.	./.	./.	./.	./.	0/0:47,0:41:99:0,108,2527	./.	0/0:23,0:18:26.89:0,27,590	1/1:2,13:10:30.09:362,30,0	1/1:2,1:1:2.97:20,3,0	0/0:19,0:17:39.13:0,39,922	0/0:12,0:5:15.05:0,15,369	0/0:18,0:3:3.01:0,3,74	0/0:17,0:8:6.02:0,6,148
chr10	34169880	.	C	CTT	32297.29	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-11.670;DP=746;FS=0.970;HRun=1;HaplotypeScore=72.0700;InbreedingCoeff=0.9999;MQ=79.69;MQ0=1;MQRankSum=-7.963;QD=48.42;ReadPosRankSum=6.753;VQSLOD=4.6553;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:51.13:0,51,734	1/1:1,12:14:33.07:599,33,0	0/0:33,0:33:76.96:0,77,1177	0/0:27,1:28:46.88:0,47,903	1/1:0,28:28:78.05:1316,78,0	1/1:2,27:29:72.25:1391,72,0	1/1:0,15:15:42.14:811,42,0	1/1:2,36:38:99:1911,108,0	1/1:0,25:25:63.22:1216,63,0	1/1:0,29:31:93.28:1698,93,0	1/1:0,29:29:84.24:1581,84,0	1/1:0,35:35:93.32:1796,93,0	1/1:1,24:25:57.03:1101,57,0	1/1:0,20:21:42.14:811,42,0	1/1:0,29:29:75.26:1448,75,0	1/1:0,30:30:63.22:1217,63,0	1/1:0,34:34:87.30:1679,87,0	1/1:0,20:20:51.17:981,51,0	1/1:0,18:18:54.10:874,54,0	1/1:0,30:30:87.18:1567,87,0	1/1:0,27:28:63.22:1216,63,0	1/1:2,20:22:51.13:947,51,0	1/1:0,29:29:78.27:1506,78,0	1/1:0,18:17:42.14:811,42,0	1/1:0,26:25:69.24:1333,69,0	1/1:2,31:33:96.29:1722,96,0	1/1:2,38:40:99:1910,99,0	1/1:1,18:19:45.15:854,45,0
chr10	34172858	.	TA	T	5595.39	PASS	AB=0.963;AC=39;AF=0.696;AN=56;BaseQRankSum=3.839;DP=422;FS=6.271;HRun=10;HaplotypeScore=93.8304;InbreedingCoeff=0.7234;MQ=61.44;MQ0=2;MQRankSum=0.686;QD=18.53;ReadPosRankSum=1.945;VQSLOD=5.3671;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,20:22:50.99:443,51,0	1/1:1,2:3:6:52,6,0	0/1:13,0:6:10.29:10,0,53	0/1:17,0:9:12.53:13,0,79	0/0:22,0:22:48.13:0,48,531	0/0:19,0:19:33.09:0,33,365	0/0:15,0:16:33.49:0,33,361	1/1:4,20:24:65.94:563,66,0	0/0:10,1:11:1.02:0,1,239	1/1:5,11:16:35.95:312,36,0	1/1:2,21:23:59.97:517,60,0	0/0:14,0:14:35.85:0,36,359	1/1:5,12:17:35.81:308,36,0	1/1:1,14:15:38.97:338,39,0	1/1:0,17:17:44.98:390,45,0	1/1:1,12:13:35.99:312,36,0	0/0:29,2:31:61.16:0,61,883	1/1:1,13:14:38.98:338,39,0	1/1:4,8:12:23.91:201,24,0	1/1:1,13:14:38.97:338,39,0	1/1:3,6:9:11.93:104,12,0	1/1:3,7:10:20.99:182,21,0	0/0:6,0:6:12.03:0,12,133	0/1:7,1:8:1.98:2,0,207	1/1:2,4:6:11.96:104,12,0	1/1:4,16:20:47.91:416,48,0	1/1:2,17:19:50.99:443,51,0	1/1:2,8:10:23.99:208,24,0
chr10	34172896	.	CA	C	7383.88	PASS	AB=1.000;AC=51;AF=0.911;AN=56;BaseQRankSum=-4.665;DP=480;FS=9.011;HRun=7;HaplotypeScore=106.6223;InbreedingCoeff=0.6679;MQ=67.46;MQ0=13;MQRankSum=-1.712;QD=19.28;ReadPosRankSum=2.926;VQSLOD=3.6917;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:20,0:20:0.47:61,0,0	1/1:0,4:4:12.03:121,12,0	0/0:57,0:17:22.61:0,23,227	0/0:36,1:15:12.32:0,12,157	1/1:1,0:18:21.21:69,21,0	1/1:1,0:13:20.37:60,20,0	1/1:2,0:13:5.02:38,5,0	1/1:10,21:31:78:724,78,0	1/1:1,0:9:12.18:35,12,0	1/1:4,16:20:60.02:572,60,0	1/1:5,20:25:72.01:700,72,0	1/1:0,0:2:4.59:14,5,0	1/1:2,7:9:21.04:212,21,0	1/1:4,7:11:29.98:278,30,0	1/1:6,8:14:36.06:357,36,0	1/1:4,5:9:27.02:256,27,0	1/1:7,0:32:48.89:144,49,0	1/1:3,9:12:23.83:274,24,0	1/1:2,17:19:51.06:500,51,0	1/1:5,12:17:36.05:352,36,0	1/1:1,7:8:15.03:153,15,0	1/1:1,9:10:27.06:272,27,0	1/1:1,1:2:3.81:19,4,0	1/1:1,1:4:8.17:55,8,0	1/1:0,12:12:33.07:336,33,0	1/1:6,19:24:59.65:602,60,0	1/1:5,16:21:54.08:536,54,0	1/1:4,18:22:66.08:644,66,0
chr10	34174732	.	AACC	A	257.24	PASS	AB=0.950;AC=14;AF=0.250;AN=56;BaseQRankSum=10.210;DP=340;FS=3.407;HRun=0;HaplotypeScore=58.9270;InbreedingCoeff=-0.3616;MQ=82.91;MQ0=1;MQRankSum=-2.330;QD=1.57;ReadPosRankSum=5.824;VQSLOD=1.0344;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:18.94:0,19,217	0/1:6,0:6:29.85:30,0,37	0/0:17,0:12:29.85:0,30,366	0/0:17,0:16:36.12:0,36,439	0/0:12,0:12:35.55:0,36,395	0/0:15,0:15:38.29:0,38,346	0/0:5,0:5:14.88:0,15,125	0/0:25,0:25:0.52:0,1,438	0/0:9,0:9:23.93:0,24,236	0/1:10,0:10:23:23,0,61	0/1:10,1:11:50.48:50,0,68	0/0:5,0:5:14.93:0,15,137	0/1:5,4:9:37.52:38,0,56	0/1:14,0:14:23.31:23,0,111	0/1:10,0:10:12.08:12,0,83	0/1:9,0:9:28.12:28,0,55	0/0:14,0:15:38.85:0,39,436	0/1:14,0:14:8.12:8,0,132	0/1:11,0:11:22.15:22,0,105	0/1:8,0:8:24.33:24,0,78	0/0:16,0:16:4.74:0,5,161	0/1:19,1:20:54.69:55,0,170	0/0:8,0:9:19.58:0,20,150	0/0:21,0:21:47.40:0,47,385	0/1:13,0:14:41.72:42,0,56	0/1:14,1:16:12.46:12,0,149	0/1:11,0:12:39.99:40,0,93	0/0:1,0:1:3:0,3,26
chr10	34175059	.	C	CCAAAACAAAA	2875.95	PASS	AB=1.000;AC=14;AF=0.250;AN=56;BaseQRankSum=-6.052;DP=723;FS=5.876;HRun=0;HaplotypeScore=221.5805;InbreedingCoeff=0.7555;MQ=61.61;MQ0=10;MQRankSum=-1.671;QD=12.95;ReadPosRankSum=-2.650;VQSLOD=1.5690;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:12,0:39:9.42:192,9,0	0/0:9,0:9:24.08:0,24,643	0/1:42,0:21:12.39:12,0,138	0/0:53,0:28:6.56:0,7,232	1/1:3,17:22:29.92:532,30,0	1/1:6,8:16:6.02:300,6,0	1/1:27,0:27:42.11:882,42,0	0/0:40,0:40:72.19:0,72,1108	1/1:3,9:15:15.05:748,15,0	0/0:28,0:28:63.18:0,63,1482	0/0:16,0:16:42.12:0,42,841	0/0:22,0:22:30.12:0,30,772	0/0:15,0:15:21.05:0,21,468	0/0:18,0:18:48.09:0,48,1013	0/0:39,0:39:99:0,99,2293	0/0:30,0:30:60.18:0,60,1543	1/1:10,14:28:14.81:355,15,0	0/0:18,0:18:30.99:0,31,806	0/0:33,0:29:53.13:0,53,1181	0/0:23,0:23:51.07:0,51,952	0/0:13,0:13:21.07:0,21,538	0/0:29,0:29:60.15:0,60,1588	0/0:23,0:23:48.79:0,49,933	0/1:31,0:31:38.13:38,0,995	0/0:23,0:23:45.12:0,45,1098	0/0:31,0:31:57.18:0,57,1348	0/0:32,0:32:81.21:0,81,1902	0/0:5,0:5:15.04:0,15,350
chr10	34176031	.	C	CT	4240.37	PASS	AB=0.614;AC=31;AF=0.554;AN=56;BaseQRankSum=-4.790;DP=561;FS=0.408;HRun=13;HaplotypeScore=74.2997;InbreedingCoeff=0.5667;MQ=72.59;MQ0=2;MQRankSum=0.141;QD=11.98;ReadPosRankSum=-0.775;VQSLOD=4.4972;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,32:42:28.16:665,28,0	0/1:2,4:6:11.61:39,0,12	0/0:20,0:13:11.02:0,11,97	0/0:20,0:11:0.96:0,1,60	0/0:20,0:23:32.04:0,32,200	0/0:17,0:20:41.74:0,42,264	0/0:17,0:19:37.08:0,37,239	0/1:13,25:38:11.13:458,0,11	0/0:18,0:19:37.63:0,38,250	1/1:10,17:27:45.02:408,45,0	1/1:7,9:17:41.25:338,41,0	0/0:18,0:18:38.62:0,39,266	1/1:4,7:12:5.12:69,5,0	1/1:9,5:16:23.58:171,24,0	1/1:4,10:14:23.86:208,24,0	0/1:4,15:19:14.14:168,0,14	0/0:28,0:27:48.94:0,49,330	1/1:4,10:16:9.11:198,9,0	1/1:14,8:25:5.75:221,6,0	1/1:10,10:23:1.88:261,2,0	1/1:5,13:18:27.03:251,27,0	1/1:7,3:13:17.75:135,18,0	0/0:17,0:18:37.68:0,38,252	0/0:19,0:21:40.71:0,41,242	1/1:4,12:16:23.95:212,24,0	0/1:12,20:33:3.35:317,0,3	0/1:9,6:16:2.73:108,0,3	1/1:1,1:3:2.84:14,3,0
chr10	34176465	.	T	TAA	2657.29	PASS	AB=0.922;AC=20;AF=0.357;AN=56;BaseQRankSum=-1.184;DP=548;FS=9.969;HRun=15;HaplotypeScore=90.1758;InbreedingCoeff=0.6265;MQ=81.16;MQ0=2;MQRankSum=-0.034;QD=9.46;ReadPosRankSum=0.032;VQSLOD=1.4181;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:27,1:32:47.71:48,0,206	0/0:4,0:5:8.58:0,9,59	0/1:33,0:24:6.25:6,0,82	0/0:25,0:19:15.95:0,16,108	1/1:8,21:35:26.75:625,27,0	1/1:3,17:21:12.03:358,12,0	1/1:3,11:16:8.36:315,8,0	0/1:29,1:31:10.53:11,0,269	1/1:3,8:13:19.91:207,20,0	0/0:16,0:18:32.22:0,32,235	0/0:25,0:25:38.91:0,39,343	1/1:5,8:16:18:209,18,0	0/0:13,0:13:22.85:0,23,172	0/0:8,0:10:14.47:0,14,106	0/0:13,0:15:9.90:0,10,242	0/0:14,0:17:31.84:0,32,272	1/1:5,12:21:10.55:306,11,0	0/0:12,0:12:8.67:0,9,169	0/1:12,1:15:37.17:37,0,102	0/0:16,0:19:17.54:0,18,208	0/0:13,0:14:17.29:0,17,164	0/0:21,0:22:28.98:0,29,224	1/1:6,17:26:49.14:519,49,0	1/1:5,10:18:22.29:216,22,0	0/0:24,0:24:6.73:0,7,289	0/0:25,0:27:29.60:0,30,366	0/0:8,0:10:11.47:0,11,122	0/0:8,0:9:8.70:0,9,71
chr10	34176665	.	ACTGCTAAGCT	A	13913.20	PASS	AB=0.960;AC=35;AF=0.625;AN=56;BaseQRankSum=14.123;DP=473;FS=0.387;HRun=0;HaplotypeScore=207.6076;InbreedingCoeff=0.9017;MQ=73.08;MQ0=1;MQRankSum=-14.975;QD=56.56;ReadPosRankSum=1.634;VQSLOD=4.5548;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:44:99:0,111,5453	1/1:1,9:10:27.09:873,27,0	0/0:16,0:17:39.13:0,39,1672	0/0:18,0:18:39.97:0,40,1896	0/0:22,0:22:63.18:0,63,2771	0/0:24,0:24:63.22:0,63,3079	0/0:18,0:18:44.82:0,45,2137	1/1:9,8:17:30.09:854,30,0	0/1:23,1:24:33.89:34,0,2851	1/1:8,16:24:51.18:1643,51,0	1/1:5,11:16:33.11:1055,33,0	0/0:12,0:11:27.09:0,27,1206	1/1:3,8:11:24.08:776,24,0	1/1:2,8:10:17.77:581,18,0	1/1:6,11:17:33.11:1067,33,0	1/1:3,7:10:21.07:679,21,0	0/0:32,0:32:90.31:0,90,4680	1/1:4,5:9:18.06:545,18,0	1/1:9,6:14:21.05:605,21,0	1/1:6,6:12:24.08:766,24,0	1/1:6,3:9:6.02:194,6,0	1/1:7,6:13:24.05:633,24,0	0/0:19,0:19:54.19:0,54,2575	0/0:21,0:21:54.19:0,54,2824	1/1:1,13:14:39.12:1188,39,0	1/1:6,11:16:33.11:1060,33,0	1/1:4,9:13:27.09:874,27,0	1/1:0,5:5:15.05:485,15,0
chr10	34176672	.	AGCT	A	3849.24	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=16.222;DP=395;FS=0.000;HRun=0;HaplotypeScore=166.1781;InbreedingCoeff=0.9909;MQ=76.98;MQ0=1;MQRankSum=-15.824;QD=24.21;ReadPosRankSum=0.876;VQSLOD=3.4307;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,123,2911	1/1:9,0:9:26.95:226,27,0	0/0:12,0:12:36.12:0,36,831	0/0:19,0:20:51.82:0,52,1162	0/0:19,0:19:57.18:0,57,1343	0/0:22,0:22:66.19:0,66,1525	0/0:18,0:18:47.91:0,48,1121	1/1:8,1:9:26.95:245,27,0	0/0:22,0:22:33.60:0,34,1308	1/1:17,0:17:50.80:394,51,0	1/1:11,0:11:32.83:248,33,0	0/0:10,0:9:27.07:0,27,615	1/1:8,0:8:23.94:189,24,0	1/1:8,0:8:17.84:141,18,0	1/1:11,0:11:32.92:261,33,0	1/1:7,0:7:20.95:165,21,0	0/0:31,0:31:93.32:0,93,2292	1/1:7,0:7:20.94:192,21,0	1/1:6,4:10:30:361,30,0	1/1:8,0:8:22.95:160,23,0	1/1:3,3:6:15.01:178,15,0	1/1:6,1:7:20.93:163,21,0	0/0:19,0:19:54.19:0,54,1287	0/0:19,0:19:54.19:0,54,1331	1/1:13,0:13:35.91:284,36,0	1/1:13,0:12:32.85:253,33,0	1/1:9,1:10:29.95:269,30,0	1/1:5,0:5:14.97:119,15,0
chr10	34176683	.	CGT	C	13505.84	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=1.879;DP=413;FS=1.683;HRun=0;HaplotypeScore=129.9766;InbreedingCoeff=0.9766;MQ=76.52;MQ0=2;MQRankSum=-8.491;QD=35.17;ReadPosRankSum=4.829;VQSLOD=6.6797;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,36:40:93.31:1278,93,0	1/1:0,10:10:30.10:411,30,0	0/0:13,0:13:36.12:0,36,594	0/0:16,0:16:42.61:0,43,730	1/1:3,14:17:39.13:535,39,0	1/1:0,21:21:63.21:865,63,0	1/1:2,14:16:36.12:495,36,0	1/1:0,12:12:36.12:492,36,0	1/1:1,19:20:51.17:700,51,0	1/1:0,18:18:54.18:737,54,0	1/1:0,15:15:39.13:521,39,0	1/1:1,9:9:21.07:288,21,0	1/1:0,10:10:24.08:328,24,0	1/1:0,11:11:20.63:286,21,0	1/1:0,11:11:33.11:451,33,0	1/1:0,9:9:24.08:328,24,0	1/1:1,33:34:96.32:1319,96,0	1/1:0,9:9:24.08:322,24,0	1/1:0,10:10:30.10:411,30,0	1/1:0,7:7:18.06:246,18,0	1/1:1,15:15:26.86:369,27,0	1/1:0,8:8:21.07:288,21,0	1/1:0,15:15:38.79:535,39,0	1/1:1,19:20:51.17:701,51,0	1/1:0,15:15:39.13:533,39,0	1/1:0,15:14:33.05:452,33,0	1/1:0,10:10:30.10:410,30,0	1/1:0,5:5:15.05:206,15,0
chr10	34177470	.	GAGAC	G	2446.70	PASS	AB=0.987;AC=37;AF=0.661;AN=56;BaseQRankSum=0.770;DP=502;FS=0.579;HRun=0;HaplotypeScore=117.3312;InbreedingCoeff=-0.1452;MQ=43.19;MQ0=38;MQRankSum=5.326;QD=5.14;ReadPosRankSum=-1.750;VQSLOD=1.6144;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:28:30.92:309,31,0	1/1:4,0:3:8.92:65,9,0	0/0:8,0:3:2.97:0,3,21	0/0:7,0:2:2.99:0,3,23	1/1:22,0:21:2.37:54,2,0	1/1:16,0:16:11.45:85,11,0	0/1:23,0:17:13.32:121,0,13	0/1:28,0:23:99:102,0,146	1/1:14,0:14:11.29:80,11,0	0/1:32,0:29:99:115,0,243	0/1:15,0:12:16.36:18,0,16	1/1:23,0:22:11.90:89,12,0	0/1:15,0:13:41.35:88,0,41	0/1:21,0:19:73.20:73,0,107	1/1:20,0:20:14.07:86,14,0	1/1:13,1:13:27.36:228,27,0	0/1:17,0:16:2.61:17,0,3	0/1:9,1:10:9.11:78,0,9	0/1:18,1:18:94.13:94,0,147	1/1:17,0:17:3:26,3,0	1/1:17,0:16:6.91:110,7,0	0/1:14,0:14:24.76:113,0,25	0/1:23,0:22:1.91:79,0,2	0/1:28,1:25:0.60:161,0,1	1/1:11,0:10:6:52,6,0	0/1:24,0:22:31.16:177,0,31	1/1:17,2:19:23.71:181,24,0	0/0:11,0:3:3.01:0,3,68
chr10	34177472	.	GAC	G	3042.96	PASS	AB=0.969;AC=42;AF=0.750;AN=56;BaseQRankSum=1.510;DP=500;FS=1.977;HRun=0;HaplotypeScore=105.2709;InbreedingCoeff=0.0303;MQ=43.21;MQ0=39;MQRankSum=5.121;QD=6.39;ReadPosRankSum=-0.805;VQSLOD=2.6691;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:28,1:28:12.18:177,12,0	1/1:4,0:3:8.96:79,9,0	0/0:6,0:2:2.98:0,3,21	0/0:7,0:2:2.99:0,3,23	1/1:23,0:22:11.66:78,12,0	1/1:14,2:15:11.70:86,12,0	0/1:22,1:17:10.79:113,0,11	0/1:27,0:22:99:106,0,159	1/1:14,1:15:16.17:106,16,0	0/1:33,0:30:99:144,0,235	1/1:15,0:12:5.92:41,6,0	1/1:23,0:22:11.61:80,12,0	1/1:13,1:12:19.60:128,20,0	0/1:18,3:19:36.40:135,0,36	1/1:13,6:19:18.37:184,18,0	1/1:13,1:13:34.09:292,34,0	1/1:8,9:16:2.15:58,2,0	1/1:10,0:10:17.02:175,17,0	0/1:18,1:18:99:117,0,166	1/1:16,1:17:2.84:14,3,0	1/1:17,0:16:8.16:111,8,0	1/1:14,0:14:1.51:138,2,0	0/1:23,0:22:1.91:70,0,2	0/1:27,1:24:6.70:145,0,7	1/1:12,0:11:8.37:74,8,0	0/1:24,0:22:38.54:218,0,39	1/1:14,5:19:34.82:322,35,0	0/0:11,0:3:3.01:0,3,46
chr10	34177486	.	GAC	G	1442.80	PASS	AB=0.973;AC=33;AF=0.635;AN=52;BaseQRankSum=0.573;DP=502;FS=34.734;HRun=0;HaplotypeScore=133.8366;InbreedingCoeff=-0.2320;MQ=46.97;MQ0=31;MQRankSum=3.167;QD=3.42;ReadPosRankSum=-2.470;VQSLOD=0.8930;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:28:30.23:30,0,124	1/1:2,0:2:5.96:52,6,0	./.	./.	1/1:26,0:26:8.62:46,9,0	1/1:9,8:16:5.81:50,6,0	0/1:24,0:18:21.54:41,0,22	0/1:30,0:24:24.40:24,0,388	1/1:15,0:15:18.31:137,18,0	0/0:34,0:33:33.90:0,34,530	0/0:16,0:13:2.92:0,3,17	0/1:22,0:22:28.92:32,0,29	0/1:13,0:11:27.54:50,0,28	0/1:20,0:18:90.80:91,0,126	1/1:10,9:19:7.56:64,8,0	1/1:10,0:9:21.86:147,22,0	1/1:17,0:15:5.55:27,6,0	0/1:10,0:9:19.84:102,0,20	0/1:17,1:16:78.67:79,0,186	1/1:18,0:18:3.04:39,3,0	1/1:15,2:16:1.73:147,2,0	0/1:13,0:13:40.78:89,0,41	0/1:22,0:22:21.55:71,0,22	0/0:28,2:25:3.44:0,3,145	1/1:13,2:14:14.77:106,15,0	0/1:29,0:27:53.10:53,0,53	0/1:21,0:21:6.39:95,0,6	0/1:8,6:7:26.51:27,0,36
chr10	34177490	.	GAGAGAGAGAGAC	G	6695.50	PASS	AB=1.000;AC=49;AF=0.875;AN=56;BaseQRankSum=-3.393;DP=525;FS=4.116;HRun=0;HaplotypeScore=163.1555;InbreedingCoeff=0.1391;MQ=47.73;MQ0=33;MQRankSum=3.041;QD=13.00;ReadPosRankSum=0.593;VQSLOD=3.6997;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:27:15.05:300,15,0	1/1:2,0:2:2.34:64,2,0	0/0:4,0:1:2.98:0,3,21	0/0:6,0:1:0.89:0,1,2	1/1:9,21:30:5.80:84,6,0	1/1:18,0:17:8.30:162,8,0	1/1:21,0:15:2.55:48,3,0	1/1:21,12:25:23.98:275,24,0	1/1:18,0:18:25.64:423,26,0	1/1:5,28:32:73.14:1239,73,0	1/1:8,9:14:3.01:34,3,0	1/1:22,0:22:11.93:204,12,0	1/1:14,0:12:5.90:29,6,0	1/1:20,0:18:21.07:402,21,0	0/1:18,0:18:21.70:117,0,22	1/1:11,0:10:18.06:344,18,0	1/1:18,0:16:8.76:95,9,0	0/1:12,0:11:99:213,0,112	1/1:17,0:15:16.27:250,16,0	1/1:6,14:20:13.33:127,13,0	0/1:18,0:17:3.64:307,0,4	1/1:14,0:14:12.02:189,12,0	1/1:9,10:19:2.46:33,2,0	1/1:30,0:25:29.21:545,29,0	1/1:16,0:15:14.92:239,15,0	1/1:8,20:26:48.12:704,48,0	1/1:23,0:23:5.73:83,6,0	1/1:14,0:7:12.04:184,12,0
chr10	34177502	.	C	CAG	6870.18	PASS	AB=1.000;AC=50;AF=0.893;AN=56;BaseQRankSum=-2.059;DP=553;FS=1.213;HRun=0;HaplotypeScore=110.5267;InbreedingCoeff=0.3420;MQ=47.76;MQ0=35;MQRankSum=4.316;QD=13.91;ReadPosRankSum=1.676;VQSLOD=4.9577;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,21:28:15.05:251,15,0	1/1:3,0:3:5.35:90,5,0	0/0:18,0:6:11.86:0,12,93	0/0:39,0:7:6.26:0,6,48	1/1:28,0:28:6.02:84,6,0	1/1:15,0:14:12.51:186,13,0	1/1:14,5:13:2.64:48,3,0	1/1:27,0:19:21.03:268,21,0	1/1:17,0:17:32.14:450,32,0	1/1:36,0:35:75.02:1114,75,0	1/1:14,0:11:3.01:34,3,0	1/1:5,17:22:12.04:200,12,0	1/1:12,0:10:8.89:52,9,0	1/1:18,0:16:27.05:366,27,0	0/1:18,0:18:18.73:157,0,19	1/1:12,0:11:18.06:266,18,0	1/1:18,0:16:11.88:148,12,0	0/1:10,0:9:19.33:211,0,19	1/1:12,0:11:6.33:177,6,0	1/1:20,0:20:13.52:128,14,0	1/1:22,0:21:32.09:459,32,0	1/1:16,0:16:24.05:323,24,0	1/1:18,0:18:2.95:34,3,0	1/1:26,4:25:30.54:471,31,0	1/1:18,0:17:24.08:379,24,0	1/1:27,0:25:48.14:702,48,0	1/1:8,10:19:6.02:83,6,0	1/1:13,0:6:12.04:188,12,0
chr10	34177506	.	G	GAG	6854.52	PASS	AB=1.000;AC=50;AF=0.893;AN=56;BaseQRankSum=-2.094;DP=575;FS=1.227;HRun=0;HaplotypeScore=110.3986;InbreedingCoeff=0.3327;MQ=48.85;MQ0=37;MQRankSum=4.620;QD=13.99;ReadPosRankSum=1.995;VQSLOD=4.9393;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:32,0:30:15.05:251,15,0	1/1:5,0:5:5.35:90,5,0	0/0:30,0:7:11.85:0,12,93	0/0:55,0:13:5.85:0,6,48	1/1:27,0:27:6.02:84,6,0	1/1:15,0:14:12.51:186,13,0	1/1:19,0:14:2.64:48,3,0	1/1:23,0:15:21.03:268,21,0	1/1:18,0:18:32.14:450,32,0	1/1:36,0:35:76.84:1119,77,0	1/1:15,0:12:3.01:34,3,0	1/1:23,0:23:12.04:200,12,0	1/1:6,5:10:5.90:29,6,0	1/1:20,0:18:27.05:366,27,0	0/1:18,0:18:19.05:157,0,19	1/1:12,0:12:18.06:266,18,0	1/1:17,0:15:12.76:151,13,0	0/1:11,0:10:19.33:211,0,19	1/1:12,0:10:6.33:177,6,0	1/1:18,0:18:13.52:128,14,0	1/1:22,0:21:32.09:459,32,0	1/1:16,0:16:24.05:323,24,0	1/1:19,0:19:2.95:34,3,0	1/1:29,0:24:30.55:471,31,0	1/1:18,0:17:24.08:379,24,0	1/1:26,0:24:48.15:702,48,0	1/1:16,0:16:6.02:83,6,0	1/1:11,0:6:12.04:188,12,0
chr10	34177635	.	G	GCACA	20506.88	PASS	AB=0.895;AC=53;AF=0.946;AN=56;BaseQRankSum=-2.881;DP=762;FS=7.566;HRun=0;HaplotypeScore=114.5932;InbreedingCoeff=0.3363;MQ=53.87;MQ0=15;MQRankSum=3.471;QD=26.91;ReadPosRankSum=2.631;VQSLOD=4.4464;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,6:44:9.62:223,10,0	1/1:2,8:11:14.79:308,15,0	0/1:42,0:17:1.94:2,0,176	0/1:41,0:9:2.47:2,0,109	1/1:11,10:23:55.93:1050,56,0	1/1:13,9:22:30.10:692,30,0	1/1:7,15:25:18.27:382,18,0	1/1:11,16:29:54.11:919,54,0	1/1:18,8:30:53.37:959,53,0	1/1:24,5:31:56.11:908,56,0	1/1:1,10:15:26.56:543,27,0	1/1:16,16:33:62.72:1350,63,0	1/1:4,10:19:32.57:640,33,0	1/1:7,20:27:27.09:639,27,0	1/1:6,18:24:33.11:810,33,0	1/1:4,18:22:30.10:739,30,0	1/1:9,12:21:60.18:1297,60,0	1/1:5,10:15:13.06:257,13,0	1/1:16,8:22:33:516,33,0	1/1:6,23:31:47.90:1121,48,0	1/1:13,37:59:64:1134,64,0	1/1:15,20:40:47.63:1016,48,0	0/1:13,7:24:5.88:612,0,6	1/1:16,15:32:78.27:1789,78,0	1/1:4,7:11:8.77:160,9,0	1/1:7,17:28:68.66:1268,69,0	1/1:5,17:26:47.04:935,47,0	1/1:3,3:6:11.78:233,12,0
chr10	34177654	.	C	CACAA	12398.02	PASS	AB=0.990;AC=32;AF=0.571;AN=56;BaseQRankSum=8.225;DP=723;FS=23.437;HRun=0;HaplotypeScore=139.4978;InbreedingCoeff=-0.4216;MQ=59.19;MQ0=14;MQRankSum=1.603;QD=19.62;ReadPosRankSum=11.256;VQSLOD=2.0374;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:37,0:39:99:116,0,189	1/1:8,0:8:11.90:195,12,0	0/0:47,0:21:42.53:0,43,557	0/0:44,0:25:51.84:0,52,550	0/1:26,0:26:0.54:618,0,1	0/1:21,0:20:8.02:419,0,8	0/1:28,0:29:99:219,0,148	0/1:27,0:26:99:453,0,135	1/1:26,1:27:21.63:624,22,0	1/1:23,0:23:19.86:558,20,0	0/1:17,0:17:17.59:311,0,18	0/1:34,0:34:92.27:857,0,92	1/1:16,0:16:7.51:420,8,0	0/1:22,0:21:33.83:428,0,34	0/1:17,0:17:8.84:520,0,9	0/1:21,0:21:54.78:463,0,55	0/1:24,0:24:6.81:787,0,7	0/1:16,0:15:98.92:140,0,99	0/1:22,0:19:99:276,0,128	0/1:26,0:26:99:677,0,119	0/1:57,0:56:99:632,0,157	0/1:30,1:31:51.19:607,0,51	0/1:26,0:26:99:350,0,150	0/1:35,2:37:10.06:1150,0,10	0/1:12,0:12:77.44:77,0,82	0/1:27,0:28:79.30:749,0,79	1/1:21,0:21:18.29:601,18,0	1/1:5,0:5:9.03:152,9,0
chr10	34177727	.	GCA	G	4840.10	PASS	AB=0.904;AC=24;AF=0.429;AN=56;BaseQRankSum=11.213;DP=706;FS=3.611;HRun=0;HaplotypeScore=102.2181;InbreedingCoeff=0.4147;MQ=66.42;MQ0=2;MQRankSum=1.134;QD=11.42;ReadPosRankSum=3.536;VQSLOD=4.4502;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:46,2:48:9.18:9,0,1322	0/0:10,0:10:24.06:0,24,353	0/1:40,1:28:16.72:17,0,322	0/0:40,0:28:23.90:0,24,298	1/1:4,19:24:47.36:550,47,0	1/1:2,15:17:30.09:362,30,0	1/1:8,12:20:42.13:506,42,0	0/1:22,2:24:27.21:27,0,553	1/1:3,28:31:75.23:904,75,0	0/1:19,3:22:54.34:54,0,667	0/0:14,0:14:30.09:0,30,459	1/1:10,16:27:19.02:392,19,0	0/0:10,0:10:24.08:0,24,378	0/0:27,0:26:72.24:0,72,1124	0/1:26,3:29:27.27:27,0,1070	0/1:22,3:25:26.98:27,0,841	1/1:6,23:30:60.01:701,60,0	0/1:16,3:19:57.95:58,0,500	0/0:17,0:17:26.99:0,27,364	0/0:23,0:23:18.15:0,18,768	0/0:52,1:53:82.96:0,83,1694	0/0:12,0:12:27.09:0,27,430	1/1:3,15:20:35.77:390,36,0	1/1:8,27:36:65.98:774,66,0	0/0:23,1:24:27.07:0,27,924	0/0:34,0:34:51.08:0,51,1252	0/0:16,1:17:8.92:0,9,602	0/1:8,2:10:42.23:42,0,355
chr10	34179581	.	CCAA	C	13088.95	PASS	AB=0.667;AC=51;AF=0.911;AN=56;BaseQRankSum=1.477;DP=612;FS=9.579;HRun=0;HaplotypeScore=85.5711;InbreedingCoeff=0.8170;MQ=60.17;MQ0=4;MQRankSum=4.734;QD=23.41;ReadPosRankSum=4.696;VQSLOD=4.0356;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:9,24:33:46.40:626,46,0	1/1:1,6:7:18.06:252,18,0	0/0:29,0:19:20.56:0,21,356	0/0:24,0:17:21.04:0,21,359	1/1:7,22:29:63.07:796,63,0	1/1:5,30:35:72.24:1008,72,0	1/1:5,5:10:15.05:210,15,0	1/1:17,16:33:48.13:624,48,0	1/1:4,18:22:42.14:588,42,0	1/1:4,18:22:51.14:658,51,0	1/1:3,21:24:60.16:817,60,0	1/1:6,10:16:24.08:336,24,0	1/1:8,16:25:30.07:399,30,0	1/1:10,7:17:21.07:294,21,0	1/1:8,16:24:36.12:504,36,0	1/1:10,15:25:42.14:588,42,0	1/1:9,12:21:30.10:420,30,0	0/1:6,6:12:3.94:153,0,4	1/1:1,10:10:27.09:378,27,0	1/1:11,15:26:42.11:567,42,0	1/1:5,20:25:54.18:756,54,0	1/1:7,11:17:30.10:420,30,0	1/1:6,11:17:27.09:378,27,0	1/1:7,19:26:42.14:587,42,0	1/1:6,9:15:27.09:378,27,0	1/1:17,13:30:39.11:513,39,0	1/1:6,15:21:30.10:420,30,0	1/1:3,12:14:30.10:420,30,0
chr10	34180747	.	C	CA	7082.49	PASS	AB=0.859;AC=34;AF=0.607;AN=56;BaseQRankSum=-6.954;DP=575;FS=1.193;HRun=10;HaplotypeScore=75.1025;InbreedingCoeff=0.7073;MQ=67.93;MQ0=3;MQRankSum=2.209;QD=18.40;ReadPosRankSum=-0.420;VQSLOD=5.2372;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:19:46.17:0,46,372	1/1:2,9:11:20.89:212,21,0	0/1:18,0:14:27.21:27,0,47	0/1:12,0:7:3.04:3,0,32	0/0:23,0:24:52.95:0,53,424	0/0:24,0:24:36.04:0,36,336	0/0:10,0:10:26.96:0,27,222	0/1:16,2:14:8.54:85,0,9	0/0:22,0:22:50.90:0,51,415	1/1:8,24:32:71.96:729,72,0	1/1:4,18:22:51:500,51,0	0/0:14,0:14:35.96:0,36,295	1/1:2,11:13:2.17:231,2,0	1/1:2,15:17:23.81:256,24,0	1/1:3,21:24:57.14:608,57,0	0/1:3,19:22:1.17:400,0,1	0/0:39,0:38:95.85:0,96,785	1/1:4,14:19:14.29:341,14,0	1/1:5,11:14:27.03:270,27,0	1/1:3,26:31:76.55:734,77,0	1/1:0,8:8:21.05:222,21,0	1/1:6,11:17:16.58:322,17,0	0/0:25,0:25:35.63:0,36,443	0/0:12,0:13:26.44:0,26,197	1/1:2,20:22:42.11:448,42,0	1/1:4,22:26:58.29:572,58,0	1/1:9,33:42:46.90:910,47,0	1/1:2,10:13:2.26:214,2,0
chr10	34183103	.	T	TC	396.48	PASS	AB=0.627;AC=5;AF=0.089;AN=56;BaseQRankSum=0.333;DP=459;FS=2.695;HRun=10;HaplotypeScore=58.9510;InbreedingCoeff=0.2717;MQ=84.40;MQ0=0;MQRankSum=0.217;QD=5.66;ReadPosRankSum=-1.820;VQSLOD=0.8279;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:6,10:17:10.24:140,0,10	0/0:7,0:7:14.96:0,15,121	0/0:16,0:17:2.74:0,3,128	0/0:23,0:23:14.45:0,14,238	0/0:22,0:21:44.92:0,45,365	0/0:19,0:20:43.93:0,44,350	0/0:22,1:24:23.76:0,24,391	0/0:13,0:14:16.98:0,17,129	0/0:11,0:13:26:0,26,202	0/0:13,0:13:26.94:0,27,219	0/0:12,0:12:0.98:0,1,214	1/1:6,13:18:14.80:160,15,0	0/0:13,0:13:29.46:0,29,230	0/0:12,0:12:26.94:0,27,219	0/0:17,0:19:37.39:0,37,300	0/0:19,0:19:23.42:0,23,323	0/0:22,0:23:52.95:0,53,424	0/0:14,0:14:38.95:0,39,319	0/0:9,0:9:11.76:0,12,86	0/0:24,0:25:58.58:0,59,472	0/0:19,0:19:23.93:0,24,196	0/0:14,0:14:35.47:0,35,292	0/1:4,5:9:34.24:81,0,34	0/1:9,16:25:46.19:136,0,46	0/0:16,0:16:29.94:0,30,246	0/0:13,0:13:29.95:0,30,246	0/0:18,0:18:38.91:0,39,317	0/0:9,0:10:19.99:0,20,154
chr10	34184159	.	T	TG	485.48	PASS	AB=0.814;AC=11;AF=0.196;AN=56;BaseQRankSum=4.383;DP=422;FS=34.990;HRun=10;HaplotypeScore=61.3678;InbreedingCoeff=0.6729;MQ=68.54;MQ0=0;MQRankSum=-1.195;QD=4.33;ReadPosRankSum=1.208;VQSLOD=-0.4641;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:21.18:0,21,206	0/1:8,2:10:45.94:46,0,79	0/0:7,0:7:11.97:0,12,98	0/0:15,0:13:11.11:0,11,65	0/1:5,2:14:9.83:83,0,10	1/1:14,2:18:14.66:112,15,0	1/1:4,3:20:19.98:135,20,0	0/0:20,0:20:11.43:0,11,98	1/1:4,11:17:17.71:156,18,0	0/0:16,0:16:29.92:0,30,246	0/0:14,0:16:31.01:0,31,231	0/0:17,0:17:35.92:0,36,293	0/0:13,0:14:31.96:0,32,246	0/0:13,0:13:26.92:0,27,219	0/0:23,1:24:33.92:0,34,482	0/0:16,0:16:35.93:0,36,295	1/1:7,3:24:20.05:117,20,0	0/0:8,0:8:20.96:0,21,171	0/0:11,0:14:24.01:0,24,158	0/0:14,0:15:22.97:0,23,178	0/0:11,0:11:29.97:0,30,246	0/0:12,0:12:20.96:0,21,172	0/0:14,0:14:23.70:0,24,197	0/0:16,0:18:37.01:0,37,282	0/0:7,0:7:11.97:0,12,98	0/0:20,0:20:37.62:0,38,317	0/0:18,0:18:41.94:0,42,345	0/1:9,0:9:1.76:2,0,105
chr10	34185165	.	T	TA	8288.85	PASS	AB=1.000;AC=35;AF=0.625;AN=56;BaseQRankSum=-13.666;DP=558;FS=6.013;HRun=8;HaplotypeScore=52.6991;InbreedingCoeff=0.9384;MQ=70.92;MQ0=0;MQRankSum=1.471;QD=24.89;ReadPosRankSum=-2.676;VQSLOD=4.5810;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:86.99:0,87,780	1/1:1,9:10:24.07:277,24,0	0/0:17,0:16:20.17:0,20,252	0/1:9,0:8:1.51:2,0,45	0/0:24,0:24:63.02:0,63,576	0/0:24,0:24:66.01:0,66,595	0/0:16,0:16:45.02:0,45,411	1/1:4,34:39:99:1109,105,0	0/0:20,0:20:57.02:0,57,518	1/1:7,16:22:50.92:539,51,0	1/1:2,16:18:45.07:502,45,0	0/0:24,0:24:69:0,69,617	1/1:1,15:16:33.10:380,33,0	1/1:2,16:18:39.12:449,39,0	1/1:5,20:25:51.15:588,51,0	1/1:3,16:19:36.10:415,36,0	0/0:18,0:18:44.99:0,45,402	1/1:2,12:14:36.11:415,36,0	1/1:8,8:16:27.07:302,27,0	1/1:2,16:19:48.08:526,48,0	1/1:1,4:5:6.02:69,6,0	1/1:4,16:20:39.12:450,39,0	0/0:32,0:32:87.02:0,87,787	0/0:17,0:17:44.99:0,45,402	1/1:3,25:29:75.22:862,75,0	1/1:2,22:24:41.76:712,42,0	1/1:7,15:22:42.12:484,42,0	1/1:0,6:6:18.05:208,18,0
chr10	34185554	.	C	CGTGT	5853	PASS	AB=0.825;AC=29;AF=0.537;AN=54;BaseQRankSum=6.977;DP=615;FS=22.322;HRun=0;HaplotypeScore=152.9820;InbreedingCoeff=0.1959;MQ=64.46;MQ0=4;MQRankSum=-3.701;QD=13.80;ReadPosRankSum=-1.189;VQSLOD=2.8217;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:38:91.54:0,92,1083	1/1:6,10:17:11.84:286,12,0	0/0:24,0:9:23.89:0,24,318	0/0:39,0:32:65.74:0,66,1002	0/1:24,0:23:99:114,0,339	0/1:17,0:17:78.21:78,0,277	0/0:16,0:16:14.76:0,15,211	1/1:26,0:28:45.43:539,45,0	0/1:21,0:21:97.53:98,0,345	1/1:22,4:26:36.36:486,36,0	./.	0/1:18,0:18:52.56:53,0,101	1/1:5,4:15:18.48:299,18,0	0/1:5,6:14:17.75:223,0,18	1/1:13,7:20:33.08:639,33,0	1/1:2,9:15:12.04:283,12,0	0/0:25,0:23:42.51:0,43,596	0/1:5,11:18:33.15:276,0,33	0/1:13,6:22:3:375,0,3	1/1:9,6:18:13.06:302,13,0	0/1:47,3:51:9.25:451,0,9	1/1:5,11:22:17.91:333,18,0	0/0:22,0:22:17.40:0,17,463	0/1:21,0:21:32.42:32,0,148	0/0:4,6:13:2.64:0,3,31	1/1:11,8:25:18.16:696,18,0	0/1:6,1:14:43.39:88,0,43	0/1:6,6:15:0.88:203,0,1
chr10	34185559	.	A	ATGTGTG	6269.13	PASS	AB=0.949;AC=41;AF=0.732;AN=56;BaseQRankSum=-1.368;DP=658;FS=6.239;HRun=0;HaplotypeScore=173.0315;InbreedingCoeff=0.1278;MQ=61.72;MQ0=7;MQRankSum=-0.528;QD=11.26;ReadPosRankSum=-1.417;VQSLOD=3.5452;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:40:12.47:0,12,97	1/1:19,0:19:12.04:196,12,0	0/0:25,0:8:2.82:0,3,74	0/0:35,0:27:17.31:0,17,221	1/1:9,14:29:15.05:323,15,0	1/1:10,7:25:12.04:273,12,0	1/1:6,12:21:0.47:1,0,0	1/1:31,0:30:53.67:544,54,0	1/1:12,10:30:18.06:527,18,0	1/1:24,0:24:38.98:478,39,0	1/1:13,0:13:2.99:23,3,0	0/1:3,2:22:13.96:104,0,14	1/1:14,0:14:18.89:186,19,0	0/1:18,0:18:21.91:204,0,22	1/1:21,0:20:32.76:515,33,0	1/1:15,0:15:12.04:204,12,0	1/1:23,1:24:23.01:285,23,0	0/1:18,0:18:60.71:232,0,61	0/1:22,0:21:13.44:331,0,13	1/1:22,0:21:17.83:233,18,0	0/1:54,0:53:33.78:465,0,34	1/1:19,0:19:23.43:266,23,0	1/1:14,8:26:3.01:38,3,0	1/1:11,10:26:5.82:77,6,0	0/1:14,0:14:14:14,0,38	0/1:22,0:22:0.73:562,0,1	0/1:14,0:14:51.61:52,0,72	0/1:11,0:11:0.92:137,0,1
chr10	34187773	.	A	AC	35720.91	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-10.981;DP=901;FS=0.441;HRun=0;HaplotypeScore=73.0974;InbreedingCoeff=0.9989;MQ=92.81;MQ0=0;MQRankSum=-14.205;QD=43.35;ReadPosRankSum=8.316;VQSLOD=3.8584;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,52:53:99:2206,138,0	1/1:0,19:19:54.18:861,54,0	0/0:43,0:43:99:0,123,1702	0/0:34,0:34:98.14:0,98,1268	1/1:1,30:31:87.30:1391,87,0	1/1:0,27:27:81.01:1258,81,0	1/1:0,27:27:69.24:1103,69,0	1/1:1,46:47:99:2166,138,0	1/1:0,34:34:93.32:1487,93,0	1/1:2,33:35:99:1573,99,0	1/1:0,25:25:63.21:1007,63,0	1/1:0,43:43:99:2014,126,0	1/1:1,37:38:99:1620,102,0	1/1:0,45:45:99:1918,120,0	1/1:1,24:25:69.24:1103,69,0	1/1:2,36:38:96.33:1535,96,0	1/1:1,37:37:99:1699,108,0	1/1:1,15:16:42.14:671,42,0	1/1:0,18:18:54.16:838,54,0	1/1:2,30:32:84.29:1343,84,0	1/1:0,38:38:96.33:1535,96,0	1/1:2,30:32:84.29:1343,84,0	1/1:0,30:30:84.29:1343,84,0	1/1:0,30:30:78.27:1247,78,0	1/1:0,32:32:93.32:1487,93,0	1/1:1,26:27:78.27:1247,78,0	1/1:2,34:36:84.29:1343,84,0	1/1:0,8:8:24.08:383,24,0
chr10	34188702	.	GT	G	14696.14	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-3.603;DP=599;FS=3.589;HRun=7;HaplotypeScore=59.7869;InbreedingCoeff=0.9452;MQ=71.62;MQ0=0;MQRankSum=-7.771;QD=26.01;ReadPosRankSum=5.348;VQSLOD=5.2354;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,40:45:99:1100,108,0	1/1:0,9:9:27.06:275,27,0	0/0:19,0:19:51.15:0,51,621	0/0:15,0:15:12.92:0,13,340	1/1:4,17:21:48.10:488,48,0	1/1:2,22:24:63.14:643,63,0	1/1:1,22:23:60.14:612,60,0	1/1:2,22:24:63.14:642,63,0	1/1:5,13:18:41.98:428,42,0	1/1:0,16:16:45.09:453,45,0	1/1:1,11:12:33.07:337,33,0	1/1:1,29:30:81.18:826,81,0	1/1:1,18:19:51.11:520,51,0	1/1:0,20:20:51.12:520,51,0	1/1:2,31:33:90.20:918,90,0	1/1:0,17:17:51.12:520,51,0	1/1:4,40:43:99:1132,111,0	1/1:2,10:12:24.05:245,24,0	1/1:3,22:25:66.15:672,66,0	1/1:1,8:9:15.03:153,15,0	1/1:6,39:45:99:1128,111,0	1/1:0,8:8:24.05:245,24,0	1/1:2,8:10:21.05:214,21,0	1/1:5,25:29:69.15:703,69,0	1/1:0,18:18:48.11:489,48,0	1/1:1,26:27:72.15:728,72,0	1/1:1,22:23:60.14:612,60,0	1/1:0,3:3:9.02:91,9,0
chr10	34190852	.	CAG	C	1080.06	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.928;DP=695;FS=7.279;HRun=0;HaplotypeScore=86.3169;InbreedingCoeff=0.9877;MQ=68.97;MQ0=0;MQRankSum=-0.865;QD=34.84;ReadPosRankSum=1.926;VQSLOD=5.9130;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,27:31:84.28:1175,84,0	0/0:7,0:7:21.01:0,21,314	0/0:32,0:27:68.37:0,68,1002	0/0:32,0:30:66.60:0,67,1128	0/0:16,0:16:48.16:0,48,864	0/0:29,0:29:84.24:0,84,1449	0/0:24,0:24:60.21:0,60,1072	0/0:33,0:33:84.23:0,84,1316	0/0:37,0:37:99:0,108,1918	0/0:28,0:28:81.28:0,81,1459	0/0:18,0:18:54.19:0,54,968	0/0:37,0:37:99:0,102,1835	0/0:18,0:18:48.15:0,48,835	0/0:21,0:21:60.21:0,60,1072	0/0:31,0:31:90.29:0,90,1581	0/0:28,0:27:78.27:0,78,1404	0/0:23,0:23:69.24:0,69,1242	0/0:12,0:12:33.11:0,33,594	0/0:27,0:27:78.25:0,78,1354	0/0:16,0:16:42.13:0,42,719	0/0:65,0:65:99:0,190,3272	0/0:14,0:14:39.13:0,39,702	0/0:14,0:14:42.14:0,42,756	0/0:26,0:26:72.25:0,72,1263	0/0:20,0:20:60.21:0,60,1080	0/0:29,0:29:84.29:0,84,1501	0/0:21,0:21:63.22:0,63,1134	0/0:6,0:6:18.04:0,18,292
chr10	34191495	.	C	CT	4388.01	PASS	AB=0.717;AC=32;AF=0.571;AN=56;BaseQRankSum=-6.314;DP=489;FS=4.911;HRun=12;HaplotypeScore=60.6965;InbreedingCoeff=0.5655;MQ=71.30;MQ0=0;MQRankSum=-1.640;QD=14.39;ReadPosRankSum=-1.357;VQSLOD=5.0149;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:26:58.67:0,59,422	1/1:0,9:10:21.03:204,21,0	0/1:18,0:16:32.01:69,0,32	0/1:7,0:6:9.21:9,0,14	0/0:25,0:25:50.61:0,51,369	0/0:29,1:33:58.41:0,58,573	0/0:14,0:15:28.79:0,29,197	1/1:12,17:30:6.99:349,7,0	0/0:14,1:17:4.68:0,5,178	1/1:5,15:21:26.07:401,26,0	1/1:5,10:16:26.88:248,27,0	0/0:11,0:12:22.86:0,23,157	0/1:4,9:14:4.92:266,0,5	1/1:0,9:9:21.03:204,21,0	1/1:5,9:14:12.02:117,12,0	1/1:2,9:11:8.14:241,8,0	0/0:27,0:30:65.70:0,66,453	1/1:6,14:20:23.21:387,23,0	1/1:4,6:13:7.65:196,8,0	1/1:9,20:30:38.06:518,38,0	0/1:3,5:9:1.04:140,0,1	1/1:5,7:14:27.96:233,28,0	0/0:19,0:20:34.79:0,35,245	0/0:6,0:6:17.90:0,18,131	1/1:3,13:17:11.50:256,11,0	1/1:8,9:17:8.98:79,9,0	0/1:7,20:28:11.78:369,0,12	0/1:1,5:6:6.89:102,0,7
chr10	34192982	.	T	TTCTC	1764.49	PASS	AB=0.858;AC=43;AF=0.935;AN=46;BaseQRankSum=-1.982;DP=579;FS=19.045;HRun=0;HaplotypeScore=112.9855;InbreedingCoeff=-0.0027;MQ=65.04;MQ0=15;MQRankSum=1.421;QD=3.57;ReadPosRankSum=-2.142;VQSLOD=0.4996;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:16:8.96:131,9,0	./.	./.	./.	1/1:24,0:24:2.99:24,3,0	1/1:20,0:20:5.96:92,6,0	1/1:20,0:18:3.01:64,3,0	1/1:42,0:41:3.43:8,3,0	1/1:11,4:15:5.91:86,6,0	1/1:21,0:21:4.42:51,4,0	./.	1/1:27,0:27:14.94:149,15,0	1/1:18,0:17:0.47:1,0,0	1/1:16,0:16:5.97:136,6,0	1/1:16,0:16:2.96:64,3,0	1/1:16,0:16:3.01:68,3,0	1/1:15,0:15:9.03:175,9,0	0/1:11,4:15:12.16:73,0,12	1/1:26,0:25:10.83:139,11,0	0/1:26,0:25:0:0,0,0	1/1:21,0:20:6.02:106,6,0	1/1:27,0:27:6.01:60,6,0	1/1:23,0:23:2.99:24,3,0	0/1:10,2:13:16.13:62,0,16	1/1:25,0:25:3.01:65,3,0	1/1:28,0:28:3.90:69,4,0	1/1:23,0:23:15.03:212,15,0	./.
chr10	34193732	.	A	ATATT	2145.31	PASS	AB=1.000;AC=29;AF=0.690;AN=42;BaseQRankSum=-2.529;DP=263;FS=8.305;HRun=0;HaplotypeScore=38.8975;InbreedingCoeff=0.4955;MQ=74.45;MQ0=2;MQRankSum=-0.900;QD=13.49;ReadPosRankSum=-0.237;VQSLOD=1.1881;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:8:3.01:0,3,46	0/1:6,0:6:3.94:16,0,4	./.	./.	0/0:12,0:12:6.02:0,6,91	0/0:10,0:10:3.01:0,3,46	./.	1/1:26,0:23:6.02:81,6,0	0/0:7,0:7:6.01:0,6,73	1/1:8,2:10:6.02:140,6,0	./.	./.	1/1:4,1:5:3.01:70,3,0	1/1:5,1:6:3.01:70,3,0	1/1:9,3:12:9:162,9,0	1/1:7,1:8:3.01:70,3,0	0/0:16,0:16:18.06:0,18,275	1/1:10,0:10:15.04:226,15,0	1/1:13,0:12:3.01:52,3,0	1/1:3,0:3:3.01:50,3,0	1/1:6,2:7:3.01:70,3,0	./.	./.	0/0:8,0:8:8.99:0,9,109	1/1:6,4:9:9.03:211,9,0	1/1:2,3:5:9.03:210,9,0	1/1:10,1:10:8.81:159,9,0	1/1:17,8:25:30.10:697,30,0
chr10	34193777	.	T	TA	71.04	PASS	AB=0.945;AC=19;AF=0.432;AN=44;BaseQRankSum=3.973;DP=168;FS=0.000;HRun=0;HaplotypeScore=25.1937;InbreedingCoeff=0.1674;MQ=38.09;MQ0=30;MQRankSum=4.787;QD=0.96;ReadPosRankSum=-0.374;VQSLOD=0.6845;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:8:9.03:0,9,122	0/1:4,0:4:12.96:13,0,67	./.	./.	0/0:5,0:4:9.03:0,9,120	0/0:5,0:5:3.01:0,3,42	./.	0/0:24,0:19:37.06:0,37,665	0/0:4,0:3:9.02:0,9,101	0/0:10,0:6:9.42:0,9,150	./.	./.	1/1:2,0:2:1.36:3,1,0	1/1:2,0:2:0.89:2,1,0	0/0:5,0:5:3.37:0,3,57	1/1:3,0:1:0.89:2,1,0	0/0:15,0:9:18.06:0,18,251	0/1:12,4:11:80.52:81,0,81	0/1:6,0:2:19.19:19,0,24	1/1:2,0:1:3:25,3,0	1/1:4,0:3:0.89:2,1,0	./.	0/0:4,0:2:3.01:0,3,42	0/0:4,0:4:12:0,12,145	1/1:6,0:4:2.66:7,3,0	1/1:3,0:3:2.66:7,3,0	0/1:11,1:7:27.06:27,0,144	0/1:14,0:13:1.61:2,0,89
chr10	34193851	.	C	CT	722.17	PASS	AC=20;AF=0.833;AN=24;BaseQRankSum=-2.331;DP=97;FS=0.000;HRun=0;HaplotypeScore=4.2435;InbreedingCoeff=0.2491;MQ=17.68;MQ0=39;MQRankSum=-1.827;QD=15.37;ReadPosRankSum=0.315;VQSLOD=3.8068;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	1/1:1,3:3:6.02:93,6,0	./.	0/0:2,0:1:1.82:0,2,5	./.	1/1:0,6:6:6.02:93,6,0	./.	1/1:6,6:5:15.05:233,15,0	./.	./.	./.	./.	./.	1/1:2,2:4:3.01:46,3,0	1/1:1,1:1:3.01:46,3,0	1/1:4,1:2:3.01:46,3,0	0/0:4,1:2:3.01:0,3,38	./.	1/1:5,1:1:3.01:47,3,0	./.	./.	./.	./.	1/1:0,1:1:3.01:46,3,0	1/1:2,1:1:3.01:46,3,0	./.	./.	1/1:1,3:3:8.96:111,9,0
chr10	34194406	.	TCAGA	T	3025.21	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=0.032;DP=756;FS=5.747;HRun=0;HaplotypeScore=153.8270;InbreedingCoeff=0.9636;MQ=85.09;MQ0=0;MQRankSum=-3.470;QD=46.54;ReadPosRankSum=3.668;VQSLOD=3.8450;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,129,3286	0/0:11,0:11:33.11:0,33,891	0/0:26,0:26:74.95:0,75,1889	0/0:31,0:31:83.95:0,84,2135	0/0:31,0:31:87.30:0,87,2356	0/0:30,0:30:84.29:0,84,2260	0/0:21,0:21:60.19:0,60,1583	0/0:31,0:31:87.29:0,87,2318	0/0:22,0:22:63.22:0,63,1701	0/0:33,0:33:96.32:0,96,2576	0/0:18,0:18:48.15:0,48,1201	1/1:1,26:27:66.18:1240,66,0	0/0:24,0:24:63.22:0,63,1705	0/0:30,0:30:87.30:0,87,2301	0/0:45,0:45:99:0,123,3239	0/0:29,0:29:84.29:0,84,2288	0/0:32,0:32:93.32:0,93,2536	0/0:24,0:24:72.23:0,72,1900	0/0:22,0:22:66.23:0,66,1792	0/0:30,0:30:87.30:0,87,2350	0/0:33,0:33:93.30:0,93,2475	0/0:33,0:33:90.31:0,90,2338	1/1:0,19:19:53.85:998,54,0	1/1:1,18:19:48.16:930,48,0	0/0:20,0:20:57.18:0,57,1492	0/0:31,0:31:93.32:0,93,2512	0/0:38,0:37:99:0,105,2834	0/0:2,0:2:6.02:0,6,164
chr10	34194688	.	GT	G	5307.70	PASS	AB=0.642;AC=48;AF=0.857;AN=56;BaseQRankSum=-1.501;DP=477;FS=9.593;HRun=13;HaplotypeScore=62.7368;InbreedingCoeff=0.2680;MQ=75.96;MQ0=5;MQRankSum=0.073;QD=13.04;ReadPosRankSum=1.784;VQSLOD=4.7200;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:9,17:26:4.69:296,0,5	1/1:4,4:9:16.43:118,16,0	0/0:38,0:11:4.82:0,5,48	0/0:31,0:18:7.73:0,8,114	1/1:5,17:23:49.49:335,49,0	1/1:6,13:21:30.15:225,30,0	1/1:0,9:9:20.88:153,21,0	1/1:9,25:34:45.31:478,45,0	1/1:1,13:14:35.79:263,36,0	1/1:1,12:14:37.81:267,38,0	1/1:3,14:17:3.51:185,4,0	1/1:0,18:18:47.62:350,48,0	1/1:2,8:10:17.79:131,18,0	1/1:4,7:11:5.95:44,6,0	0/1:4,8:12:7.42:128,0,7	1/1:1,15:16:23.86:175,24,0	0/1:4,13:18:14.57:222,0,15	1/1:3,8:11:20.87:153,21,0	1/1:8,8:17:1.96:149,2,0	1/1:4,21:25:27.20:347,27,0	1/1:0,5:6:13.97:93,14,0	1/1:3,9:12:3.52:144,4,0	1/1:4,16:20:23.64:175,24,0	1/1:2,5:7:14.91:109,15,0	1/1:0,12:12:23.86:175,24,0	1/1:0,16:18:50.64:345,51,0	1/1:6,17:23:10.02:230,10,0	0/1:3,1:4:10.50:19,0,11
chr10	34198528	.	GT	G	2384.29	PASS	AB=0.728;AC=16;AF=0.286;AN=56;BaseQRankSum=10.014;DP=559;FS=1.194;HRun=12;HaplotypeScore=59.9628;InbreedingCoeff=0.7424;MQ=70.40;MQ0=0;MQRankSum=0.119;QD=13.94;ReadPosRankSum=3.597;VQSLOD=4.2260;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:57.04:0,57,560	0/0:13,0:13:25.09:0,25,277	0/0:13,0:10:8.98:0,9,118	0/0:14,0:8:1.65:0,2,43	0/1:4,15:20:10.94:281,0,11	1/1:1,11:15:19.57:207,20,0	1/1:1,11:13:34.91:261,35,0	0/0:27,0:32:59.20:0,59,504	1/1:3,13:17:34.84:258,35,0	0/0:20,1:23:33.66:0,34,485	0/0:20,0:20:33.82:0,34,499	1/1:5,21:27:58.79:447,59,0	0/0:12,0:12:30.03:0,30,295	0/0:19,1:20:21.80:0,22,382	0/0:24,0:24:60.09:0,60,592	0/0:14,1:15:21.84:0,22,398	1/1:3,20:23:56.77:441,57,0	0/0:23,3:26:8.49:0,8,616	0/0:19,2:21:7.56:0,8,418	0/0:26,2:28:42.85:0,43,589	0/0:9,0:9:4.89:0,5,133	0/0:29,1:30:51.91:0,52,703	1/1:3,14:17:14.34:295,14,0	1/1:7,14:21:50.71:385,51,0	0/0:29,0:29:75.06:0,75,732	0/1:15,2:18:1.63:2,0,313	0/0:21,0:21:60.07:0,60,585	0/0:8,0:8:1.01:0,1,190
chr10	34198813	.	TTGTG	T	8992.74	PASS	AB=0.892;AC=49;AF=0.942;AN=52;BaseQRankSum=-1.142;DP=682;FS=0.000;HRun=0;HaplotypeScore=160.8739;InbreedingCoeff=0.2608;MQ=54.78;MQ0=10;MQRankSum=1.332;QD=14.37;ReadPosRankSum=1.302;VQSLOD=4.5351;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:28,16:44:5.42:224,5,0	1/1:6,9:16:4.52:309,5,0	./.	0/0:23,0:10:0:0,0,0	./.	1/1:9,0:22:6:53,6,0	1/1:14,0:21:5.47:40,5,0	1/1:17,7:24:21.02:265,21,0	1/1:12,0:31:21.02:195,21,0	1/1:8,12:22:39.12:571,39,0	1/1:14,5:23:21.07:323,21,0	1/1:8,19:30:60.05:898,60,0	1/1:11,7:19:24.07:339,24,0	1/1:10,13:24:29.96:472,30,0	1/1:11,23:36:32.80:868,33,0	1/1:6,19:27:51.17:784,51,0	1/1:12,0:21:9.01:84,9,0	1/1:12,10:22:18.64:307,19,0	1/1:9,5:14:15.03:213,15,0	1/1:14,12:26:23.63:420,24,0	0/1:29,0:33:5.01:5,0,35	1/1:14,9:22:14.94:205,15,0	1/1:15,5:24:5.55:224,6,0	1/1:14,20:34:51.17:803,51,0	1/1:13,6:19:12.04:189,12,0	1/1:18,10:29:34.36:473,34,0	1/1:10,14:26:36.11:532,36,0	1/1:3,6:9:14.54:198,15,0
chr10	34199907	.	GTCTTTCTCTCTCTCTCTCTC	G	3489.43	PASS	AB=0.592;AC=41;AF=0.820;AN=50;BaseQRankSum=-1.081;DP=465;FS=0.000;HRun=0;HaplotypeScore=185.4837;InbreedingCoeff=0.5695;MQ=46.19;MQ0=13;MQRankSum=3.547;QD=9.67;ReadPosRankSum=3.755;VQSLOD=2.0231;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:22:17.40:183,17,0	1/1:8,0:8:23.81:208,24,0	0/0:17,0:5:10.24:0,10,89	0/0:25,0:5:7.37:0,7,48	0/1:9,0:28:0:0,0,1	1/1:0,22:23:5.95:122,6,0	1/1:9,0:8:17.97:148,18,0	1/1:8,0:28:35.20:459,35,0	1/1:1,0:21:5.77:74,6,0	1/1:4,0:16:21.19:174,21,0	1/1:3,9:12:2.91:25,3,0	1/1:19,0:19:30.06:250,30,0	./.	1/1:8,0:7:7.54:94,8,0	1/1:13,1:12:17.05:140,17,0	1/1:13,0:12:20.71:209,21,0	1/1:3,0:14:12.65:74,13,0	1/1:8,0:7:17.87:182,18,0	1/1:16,0:14:35.80:272,36,0	0/0:1,0:16:0:0,0,0	1/1:20,0:18:26.70:221,27,0	0/0:1,11:11:0.47:0,0,1	1/1:4,0:18:0.94:1,1,0	1/1:20,0:20:2.84:111,3,0	./.	1/1:1,0:18:40.86:394,41,0	1/1:1,17:18:2.52:148,3,0	./.
chr10	34200388	.	G	GT	4776.90	PASS	AB=0.683;AC=30;AF=0.536;AN=56;BaseQRankSum=-8.801;DP=565;FS=1.208;HRun=12;HaplotypeScore=64.6059;InbreedingCoeff=0.5160;MQ=71.59;MQ0=0;MQRankSum=0.126;QD=14.05;ReadPosRankSum=-1.946;VQSLOD=4.7138;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:23:25.50:0,25,309	1/1:1,7:8:2.22:172,2,0	0/0:16,0:15:22.69:0,23,149	0/0:16,0:17:16.40:0,16,113	0/0:28,1:31:14.38:0,14,259	0/0:22,0:24:34.99:0,35,361	0/1:10,1:11:5.34:5,0,129	1/1:13,18:31:31.32:423,31,0	0/0:23,0:23:56.63:0,57,413	1/1:7,19:26:34.98:470,35,0	1/1:5,16:22:31.86:424,32,0	0/0:29,0:31:72.57:0,73,511	1/1:5,14:19:26.63:273,27,0	0/1:5,6:12:19.93:136,0,20	1/1:6,11:17:17.07:317,17,0	1/1:8,12:21:2.43:168,2,0	0/0:14,0:13:38.75:0,39,284	0/1:9,10:20:16.71:177,0,17	1/1:6,5:12:2.34:156,2,0	1/1:4,25:30:42.79:532,43,0	1/1:4,10:14:17.98:165,18,0	0/1:7,9:16:16.59:161,0,17	0/0:17,0:19:39.81:0,40,274	0/0:23,0:26:62.76:0,63,433	1/1:5,15:21:38.89:359,39,0	0/1:8,16:24:6.58:388,0,7	1/1:9,19:30:15.85:430,16,0	0/1:3,3:6:20.23:20,0,35
chr10	34200855	.	A	AT	14241.26	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-5.916;DP=601;FS=19.544;HRun=8;HaplotypeScore=61.9602;InbreedingCoeff=0.9461;MQ=66.28;MQ0=1;MQRankSum=-1.113;QD=26.57;ReadPosRankSum=2.251;VQSLOD=3.4738;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:96.03:0,96,872	1/1:2,4:6:12.03:136,12,0	0/0:19,0:15:23.02:0,23,194	0/0:10,0:10:23.98:0,24,209	1/1:2,19:21:57.08:626,57,0	1/1:2,21:23:51.15:589,51,0	1/1:4,17:21:48.14:554,48,0	1/1:5,31:35:90.25:1024,90,0	1/1:2,16:18:39.12:450,39,0	1/1:6,23:29:72.21:826,72,0	1/1:0,15:15:45.09:505,45,0	1/1:5,18:23:54.16:621,54,0	1/1:5,10:14:27.08:310,27,0	1/1:3,17:20:51.15:587,51,0	1/1:4,19:24:59.91:645,60,0	1/1:1,15:15:33.10:381,33,0	1/1:3,14:16:42.08:468,42,0	1/1:2,23:25:60.14:678,60,0	1/1:6,16:23:26.49:516,26,0	1/1:8,28:36:84.17:938,84,0	1/1:3,10:13:5.63:319,6,0	1/1:5,17:23:20.51:469,21,0	1/1:3,18:21:45.13:519,45,0	1/1:4,8:12:24.07:277,24,0	1/1:6,19:25:54.16:623,54,0	1/1:3,25:28:75.21:855,75,0	1/1:4,29:33:84.11:969,84,0	1/1:3,10:13:32.77:357,33,0
chr10	34201306	.	T	TA	20433.82	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=6.464;DP=554;FS=0.000;HRun=1;HaplotypeScore=138.1193;InbreedingCoeff=0.9236;MQ=62.16;MQ0=0;MQRankSum=-1.648;QD=39.75;ReadPosRankSum=0.210;VQSLOD=4.3063;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:81.26:0,81,1048	1/1:1,6:8:23.92:279,24,0	0/0:3,0:2:2.60:0,3,10	0/0:9,0:8:15.04:0,15,179	1/1:3,31:34:93.23:1351,93,0	1/1:4,22:26:60.20:897,60,0	1/1:2,12:14:36.11:519,36,0	1/1:1,42:43:99:1731,123,0	1/1:1,14:15:39.06:557,39,0	1/1:2,27:29:87.14:1225,87,0	1/1:1,18:19:57.19:838,57,0	1/1:3,23:26:63.14:910,63,0	1/1:0,15:15:39.13:583,39,0	1/1:0,16:16:48.16:707,48,0	1/1:2,25:27:69.30:1062,69,0	1/1:1,16:17:48.09:667,48,0	1/1:1,19:20:54.18:808,54,0	1/1:0,17:17:48.16:707,48,0	1/1:1,24:25:72.24:1072,72,0	1/1:1,25:26:75.09:1040,75,0	1/1:1,20:21:54.18:808,54,0	1/1:0,13:13:33.11:494,33,0	1/1:0,15:15:42.14:627,42,0	1/1:0,10:9:27.09:404,27,0	1/1:2,26:28:78.26:1137,78,0	1/1:4,26:30:86.92:1209,87,0	1/1:0,13:13:33.11:489,33,0	1/1:0,7:7:21.07:314,21,0
chr10	34201369	.	A	AGTGTGTGTGT	43186.37	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=0.994;DP=553;FS=1.367;HRun=0;HaplotypeScore=235.5446;InbreedingCoeff=0.9364;MQ=67.27;MQ0=1;MQRankSum=-9.357;QD=88.50;ReadPosRankSum=3.732;VQSLOD=4.7124;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:54.19:0,54,1652	1/1:6,7:14:29.83:1459,30,0	0/0:22,0:20:33.10:0,33,873	0/0:22,0:16:22.38:0,22,608	1/1:6,0:25:60.21:1775,60,0	1/1:15,0:25:51.15:1405,51,0	1/1:7,0:12:21.96:629,22,0	1/1:30,7:36:92.97:3766,93,0	1/1:3,0:13:36.11:1011,36,0	1/1:19,6:25:57.17:2349,57,0	1/1:10,13:23:51.16:2396,51,0	1/1:8,0:20:45.14:1270,45,0	1/1:7,5:13:24.08:1109,24,0	1/1:4,6:10:30.10:1380,30,0	1/1:9,8:17:30.57:1436,31,0	1/1:11,16:27:72.23:3279,72,0	1/1:13,0:14:24.05:649,24,0	1/1:11,3:14:24.08:995,24,0	1/1:18,8:24:56:2172,56,0	1/1:13,11:26:63.20:2456,63,0	1/1:8,2:10:9.03:412,9,0	1/1:5,7:12:24.08:1212,24,0	1/1:8,0:20:42.14:1229,42,0	1/1:5,0:8:18.06:511,18,0	1/1:14,15:30:69.24:3155,69,0	1/1:20,12:33:81.27:3371,81,0	1/1:15,14:31:81.26:3544,81,0	1/1:2,0:2:6.02:219,6,0
chr10	34201398	.	C	CT	486.58	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=-5.850;DP=472;FS=1.762;HRun=10;HaplotypeScore=176.5050;InbreedingCoeff=0.5451;MQ=66.14;MQ0=2;MQRankSum=5.383;QD=10.35;ReadPosRankSum=0.330;VQSLOD=1.0162;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,20:24:54.14:576,54,0	0/0:11,0:11:26.95:0,27,221	0/0:24,0:19:22.22:0,22,161	0/1:23,0:15:15.02:15,0,72	0/0:20,0:20:38.94:0,39,320	0/0:19,0:20:49.94:0,50,399	0/0:4,0:4:5.01:0,5,31	0/0:29,0:29:56.71:0,57,467	0/0:11,0:11:29.95:0,30,246	0/0:21,0:22:58.95:0,59,473	0/0:31,0:31:74.89:0,75,615	0/0:14,0:14:32.94:0,33,271	0/0:12,0:12:26.96:0,27,222	0/0:11,0:11:29.96:0,30,246	0/0:12,0:12:32.64:0,33,256	0/0:20,0:20:44.91:0,45,365	0/0:15,0:15:41.94:0,42,344	0/0:12,0:12:29.95:0,30,246	0/0:17,0:17:38.91:0,39,320	0/0:22,1:23:30.93:0,31,452	0/0:3,0:3:5.98:0,6,49	0/0:10,0:11:32:0,32,252	0/0:17,0:17:44.90:0,45,363	0/0:10,0:11:26.97:0,27,221	0/0:24,0:24:62.92:0,63,517	0/0:22,0:22:62.80:0,63,517	0/0:24,0:25:55.94:0,56,449	0/0:4,0:4:11.97:0,12,95
chr10	34201904	.	T	TG	26682.17	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-9.484;DP=701;FS=3.831;HRun=0;HaplotypeScore=72.7893;InbreedingCoeff=0.9943;MQ=82.65;MQ0=0;MQRankSum=-7.301;QD=43.60;ReadPosRankSum=4.501;VQSLOD=5.3967;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,117,1636	1/1:0,16:16:45.15:716,45,0	0/0:26,0:26:78.23:0,78,1023	0/0:22,0:22:66.18:0,66,863	1/1:2,16:18:39.13:620,39,0	1/1:1,31:32:90.31:1439,90,0	1/1:0,25:25:66.23:1055,66,0	1/1:1,37:38:99:1704,108,0	1/1:0,21:21:60.20:959,60,0	1/1:0,26:26:78.27:1244,78,0	1/1:0,18:18:45.15:715,45,0	1/1:0,31:31:90.31:1439,90,0	1/1:0,21:21:60.20:959,60,0	1/1:0,19:19:45.15:719,45,0	1/1:1,25:26:66.22:1055,66,0	1/1:1,23:24:63.21:1007,63,0	1/1:0,31:31:90.31:1439,90,0	1/1:1,27:28:81.28:1295,81,0	1/1:0,19:19:57.17:881,57,0	1/1:0,27:27:75.26:1198,75,0	1/1:1,38:39:96.33:1535,96,0	1/1:0,21:21:60.20:958,60,0	1/1:0,23:24:57.14:885,57,0	1/1:1,27:28:78.27:1247,78,0	1/1:0,17:17:51.17:814,51,0	1/1:1,24:25:72.22:1120,72,0	1/1:0,31:30:90.31:1438,90,0	1/1:0,7:7:15.05:240,15,0
chr10	34202249	.	GAACGT	G	26189.30	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=6.606;DP=684;FS=2.753;HRun=0;HaplotypeScore=176.7370;InbreedingCoeff=0.8990;MQ=79.66;MQ0=0;MQRankSum=-11.173;QD=41.77;ReadPosRankSum=5.556;VQSLOD=5.0399;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,47:51:99:2285,114,0	1/1:2,11:12:23.68:473,24,0	0/0:28,0:28:66.23:0,66,1827	0/0:29,0:29:72.03:0,72,1940	1/1:0,23:23:50.76:922,51,0	1/1:4,9:13:24.08:423,24,0	1/1:3,18:20:45.15:880,45,0	1/1:10,25:33:63.19:1174,63,0	1/1:0,25:24:69.24:1428,69,0	1/1:2,28:30:87.28:1739,87,0	1/1:2,11:13:27.09:509,27,0	1/1:6,28:32:66.22:1294,66,0	1/1:2,20:18:42.14:869,42,0	1/1:1,20:20:54.18:1069,54,0	1/1:3,36:36:81.28:1651,81,0	1/1:3,29:30:69.19:1314,69,0	1/1:2,25:26:54.19:1118,54,0	1/1:4,11:14:24.08:496,24,0	1/1:1,22:23:54.17:980,54,0	1/1:4,27:30:66.18:1324,66,0	1/1:5,13:18:24.08:450,24,0	1/1:1,23:24:63.21:1194,63,0	1/1:2,26:28:66.23:1309,66,0	1/1:4,11:14:12.04:248,12,0	1/1:2,16:18:45.15:882,45,0	1/1:5,20:25:60.15:1126,60,0	1/1:6,19:25:48.16:969,48,0	1/1:3,1:4:3.01:62,3,0
chr10	34203305	.	T	TG	3033.60	PASS	AB=0.595;AC=15;AF=0.268;AN=56;BaseQRankSum=-4.140;DP=570;FS=14.051;HRun=3;HaplotypeScore=119.6900;InbreedingCoeff=0.8670;MQ=88.76;MQ0=0;MQRankSum=-1.563;QD=18.06;ReadPosRankSum=-0.772;VQSLOD=2.2520;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:78.24:0,78,936	0/0:13,0:13:28.77:0,29,153	0/0:17,0:17:47.78:0,48,509	0/0:26,0:26:40.04:0,40,568	1/1:15,9:24:18.66:353,19,0	1/1:4,12:16:29.13:356,29,0	1/1:6,15:21:18.06:360,18,0	0/0:19,0:19:13.85:0,14,169	1/1:2,16:18:36.11:448,36,0	0/0:15,0:15:35.92:0,36,202	0/0:22,0:22:48.12:0,48,273	1/1:7,12:19:42.12:514,42,0	0/0:13,0:13:8.92:0,9,141	0/0:8,0:8:20.35:0,20,117	0/0:24,0:24:53.46:0,53,287	0/0:15,1:16:4.89:0,5,160	1/1:3,14:17:33.05:410,33,0	0/0:19,0:19:48.67:0,49,259	0/0:17,0:17:40.89:0,41,220	0/0:38,0:38:86.23:0,86,487	0/0:27,0:27:23.74:0,24,301	0/0:20,0:20:49.80:0,50,287	0/1:7,15:22:16.03:233,0,16	1/1:7,24:31:12.09:555,12,0	0/0:18,0:18:48.78:0,49,257	0/0:20,0:20:46.70:0,47,233	0/0:32,0:32:90.48:0,90,502	0/0:8,0:8:23.36:0,23,135
chr10	34204981	.	GTTT	G	10035.48	PASS	AB=0.678;AC=44;AF=0.786;AN=56;BaseQRankSum=11.401;DP=555;FS=0.000;HRun=4;HaplotypeScore=228.9116;InbreedingCoeff=0.3341;MQ=66.35;MQ0=1;MQRankSum=-8.691;QD=21.26;ReadPosRankSum=4.831;VQSLOD=1.2303;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:93.31:0,93,2075	1/1:0,5:5:15.05:179,15,0	0/0:31,0:28:75.25:0,75,1662	0/0:21,0:19:46.34:0,46,789	0/1:7,8:15:26.73:110,0,27	0/1:9,16:25:5.13:360,0,5	1/1:3,8:11:1.08:244,1,0	1/1:21,17:38:84.37:878,84,0	1/1:8,23:30:69.23:728,69,0	1/1:8,14:21:52.23:610,52,0	1/1:6,10:16:32.51:318,33,0	0/1:5,10:15:22.08:274,0,22	1/1:5,6:11:21.97:236,22,0	1/1:4,19:23:56.61:702,57,0	1/1:11,13:24:48.62:558,49,0	1/1:5,12:17:46.19:528,46,0	0/1:12,4:16:44.17:179,0,44	1/1:6,6:12:6.22:229,6,0	1/1:12,5:17:29.84:277,30,0	1/1:5,18:23:55.84:588,56,0	1/1:10,3:13:9.82:105,10,0	1/1:5,20:25:51.52:505,52,0	0/1:8,11:19:40.12:223,0,40	0/1:12,5:17:10.06:176,0,10	1/1:5,15:20:49.07:547,49,0	1/1:8,12:19:38.15:445,38,0	1/1:8,23:31:72.65:818,73,0	1/1:2,4:6:18.04:216,18,0
chr10	34204986	.	CTTGTT	C	12895.73	PASS	AB=0.650;AC=42;AF=0.750;AN=56;BaseQRankSum=13.581;DP=535;FS=0.863;HRun=0;HaplotypeScore=236.6993;InbreedingCoeff=0.2522;MQ=63.89;MQ0=1;MQRankSum=-10.047;QD=28.91;ReadPosRankSum=6.314;VQSLOD=4.4388;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:74.45:0,74,2588	1/1:0,5:5:15.05:243,15,0	0/0:35,0:31:77.82:0,78,1830	0/0:22,0:20:36.41:0,36,805	0/1:7,8:15:41.93:210,0,42	0/1:7,16:23:10.18:528,0,10	0/1:2,8:10:4.78:333,0,5	1/1:16,17:33:66.74:972,67,0	1/1:4,23:26:70.24:967,70,0	1/1:7,14:20:47.17:741,47,0	1/1:4,10:14:31.60:392,32,0	0/1:4,10:14:29.67:386,0,30	1/1:3,6:9:4.36:267,4,0	1/1:4,19:23:61.11:940,61,0	1/1:8,13:21:49.84:681,50,0	1/1:5,12:17:43.37:658,43,0	0/1:11,4:15:68.97:198,0,69	0/1:5,6:11:4.61:277,0,5	1/1:13,5:18:21.84:334,22,0	1/1:4,18:22:60.38:801,60,0	1/1:8,3:11:14.04:135,14,0	1/1:4,20:24:51.72:688,52,0	0/1:8,11:19:99:285,0,106	0/1:10,5:15:32.87:169,0,33	1/1:7,15:22:56.10:732,56,0	1/1:5,14:18:45.89:601,46,0	1/1:8,23:31:49.69:1055,50,0	1/1:3,4:7:18.53:303,19,0
chr10	34205026	.	CCT	C	7539.70	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=7.431;DP=624;FS=3.930;HRun=0;HaplotypeScore=239.8485;InbreedingCoeff=0.9986;MQ=62.35;MQ0=0;MQRankSum=-4.477;QD=44.09;ReadPosRankSum=4.081;VQSLOD=4.6516;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,111,2207	0/0:12,0:12:36.12:0,36,704	0/0:28,0:26:69.12:0,69,1255	0/0:20,0:16:37.84:0,38,630	1/1:1,17:18:46.56:720,47,0	1/1:0,24:24:69.23:1102,69,0	1/1:0,16:16:45.15:699,45,0	0/0:37,0:37:99:0,111,1989	1/1:0,30:30:90.30:1406,90,0	0/0:19,0:19:57.19:0,57,1120	0/0:19,0:19:54.19:0,54,1083	1/1:0,20:20:60.20:971,60,0	0/0:17,0:17:48.16:0,48,959	0/0:28,0:28:84.29:0,84,1661	0/0:27,0:27:78.27:0,78,1575	0/0:17,0:17:51.17:0,51,991	1/1:0,18:18:48.16:746,48,0	0/0:19,0:19:48.16:0,48,933	0/0:14,0:14:42.10:0,42,805	0/0:20,0:20:51.15:0,51,978	0/0:17,0:17:48.16:0,48,889	0/0:31,0:31:93.28:0,93,1843	1/1:0,23:23:66.22:1033,66,0	1/1:0,22:22:53.69:863,54,0	0/0:26,0:26:78.27:0,78,1555	0/0:25,0:24:69.15:0,69,1296	0/0:34,0:32:96.31:0,96,1906	0/0:6,0:6:18.06:0,18,365
chr10	34205134	.	T	TA	17342.49	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=0.943;DP=689;FS=2.742;HRun=8;HaplotypeScore=135.9480;InbreedingCoeff=0.9351;MQ=76.44;MQ0=1;MQRankSum=-5.617;QD=27.48;ReadPosRankSum=3.339;VQSLOD=3.2242;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,1:25:28.87:0,29,509	1/1:1,6:7:15.04:173,15,0	0/0:18,0:18:41.96:0,42,370	0/0:15,0:15:29.89:0,30,262	1/1:4,29:34:81.20:916,81,0	1/1:3,33:35:96.29:1108,96,0	1/1:1,22:23:60.18:692,60,0	1/1:10,34:44:99:1113,100,0	1/1:1,16:17:45.13:519,45,0	1/1:3,32:36:96.26:1091,96,0	1/1:1,20:23:62.81:672,63,0	1/1:0,20:20:54.16:623,54,0	1/1:4,16:20:51.15:585,51,0	1/1:3,24:28:69.04:776,69,0	1/1:6,1:30:56.82:289,57,0	1/1:4,17:21:48.14:554,48,0	1/1:4,25:29:75.22:860,75,0	1/1:1,25:26:75.22:866,75,0	1/1:3,12:16:41.69:434,42,0	1/1:3,24:27:72.21:828,72,0	1/1:4,22:26:54.16:623,54,0	1/1:0,33:33:93.28:1073,93,0	1/1:4,23:27:66.20:762,66,0	1/1:2,25:27:57.13:643,57,0	1/1:3,18:21:42.12:477,42,0	1/1:3,24:28:72.03:801,72,0	1/1:2,26:28:72.21:831,72,0	1/1:1,2:3:3.01:35,3,0
chr10	34206168	.	AT	A	16998.57	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=2.350;DP=694;FS=2.397;HRun=7;HaplotypeScore=74.0507;InbreedingCoeff=0.9935;MQ=76.69;MQ0=0;MQRankSum=-5.694;QD=27.07;ReadPosRankSum=3.191;VQSLOD=5.6926;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:81.22:0,81,1001	1/1:0,13:13:36.08:367,36,0	0/0:25,0:26:61.43:0,61,744	0/0:11,0:11:23.86:0,24,274	1/1:2,36:38:99:1071,105,0	1/1:2,26:28:69.16:704,69,0	1/1:0,18:18:45.10:459,45,0	1/1:5,31:36:93.17:936,93,0	1/1:1,24:25:69.16:703,69,0	1/1:1,33:34:99:1010,99,0	1/1:2,32:34:90.20:917,90,0	1/1:0,23:23:60.14:612,60,0	1/1:1,20:21:60.14:612,60,0	1/1:1,20:21:51.11:520,51,0	1/1:0,29:29:81.18:826,81,0	1/1:0,20:20:57.13:581,57,0	1/1:2,19:21:57.12:582,57,0	1/1:0,17:17:48.11:490,48,0	1/1:2,17:19:51.11:520,51,0	1/1:0,31:31:87.19:886,87,0	1/1:1,21:22:51.12:520,51,0	1/1:1,18:19:54.12:550,54,0	1/1:3,24:27:60.13:612,60,0	1/1:1,29:30:69.16:704,69,0	1/1:2,22:24:63.14:643,63,0	1/1:4,26:30:78.18:796,78,0	1/1:2,40:42:99:1224,120,0	1/1:1,5:6:15.03:153,15,0
chr10	34206742	.	T	TC	810.81	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-5.978;DP=682;FS=2.479;HRun=7;HaplotypeScore=115.5329;InbreedingCoeff=0.9978;MQ=83.82;MQ0=0;MQRankSum=-0.326;QD=24.57;ReadPosRankSum=-2.247;VQSLOD=2.0473;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,29:33:75.23:906,75,0	0/0:9,0:9:27.04:0,27,261	0/0:24,0:24:41.93:0,42,431	0/0:24,0:25:51.80:0,52,462	0/0:39,0:39:99:0,111,1063	0/0:26,0:26:72.11:0,72,695	0/0:29,0:29:78.12:0,78,753	0/0:33,0:33:68.36:0,68,678	0/0:22,0:22:63.07:0,63,597	0/0:25,0:25:66.09:0,66,630	0/0:30,0:29:78.12:0,78,752	0/0:25,0:25:72.11:0,72,695	0/0:23,0:23:66.11:0,66,637	0/0:12,0:12:30.05:0,30,290	0/0:28,0:27:78.08:0,78,736	0/0:28,0:28:75.11:0,75,724	0/0:35,0:36:99:0,101,954	0/0:19,0:19:57.06:0,57,542	0/0:15,0:15:38.93:0,39,362	0/0:32,0:32:87.04:0,87,822	0/0:27,0:27:63.09:0,63,608	0/0:26,0:26:66.09:0,66,633	0/0:16,0:16:42.04:0,42,396	0/0:18,0:18:51.08:0,51,492	0/0:23,0:23:60.08:0,60,576	0/0:22,0:22:63.10:0,63,608	0/0:26,0:26:78.13:0,78,753	0/0:11,0:11:30.04:0,30,290
chr10	34207109	.	GGTGT	G	1606.13	PASS	AC=16;AF=0.296;AN=54;BaseQRankSum=1.580;DP=639;FS=0.000;HRun=0;HaplotypeScore=144.7592;InbreedingCoeff=0.7895;MQ=61.30;MQ0=3;MQRankSum=-0.077;QD=10.23;ReadPosRankSum=2.498;VQSLOD=2.9834;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:46:50.90:0,51,998	0/0:5,0:10:6.02:0,6,105	./.	0/0:29,0:23:6.02:0,6,85	1/1:13,12:25:24.55:377,25,0	1/1:5,2:7:6.02:94,6,0	1/1:18,12:32:30.08:432,30,0	0/0:26,0:26:12.48:0,12,229	1/1:10,7:18:24.07:357,24,0	0/0:20,0:19:21.07:0,21,426	0/0:14,0:13:6.96:0,7,104	1/1:11,0:18:15.02:140,15,0	0/0:14,0:20:9.02:0,9,165	0/0:19,0:22:9.10:0,9,148	0/0:25,0:33:13.93:0,14,212	0/0:14,0:20:9.03:0,9,156	1/1:15,8:23:18.06:282,18,0	0/0:14,0:27:18.03:0,18,300	0/0:18,0:20:27.56:0,28,486	0/0:11,0:20:20.10:0,20,331	0/0:34,0:42:22.01:0,22,377	0/0:24,0:30:6.49:0,6,120	1/1:9,0:14:9.01:82,9,0	1/1:12,0:20:3:28,3,0	0/0:17,0:20:6.49:0,6,103	0/0:23,0:33:60.68:0,61,1099	0/0:18,0:19:15.95:0,16,283	0/0:10,0:10:3.01:0,3,51
chr10	34207358	.	GAC	G	11893.98	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=12.078;DP=418;FS=3.207;HRun=0;HaplotypeScore=156.9436;InbreedingCoeff=0.9105;MQ=92.53;MQ0=0;MQRankSum=-14.236;QD=37.40;ReadPosRankSum=4.295;VQSLOD=6.3344;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,120,2317	1/1:0,1:1:3.01:44,3,0	0/0:29,0:29:72.48:0,72,1362	0/0:30,0:30:80.84:0,81,1369	1/1:0,6:6:18.05:216,18,0	1/1:0,12:12:36.12:510,36,0	1/1:0,18:18:54.18:747,54,0	1/1:1,16:17:48.16:703,48,0	1/1:0,21:21:60.20:807,60,0	1/1:0,11:12:30.10:431,30,0	1/1:1,6:7:17.97:199,18,0	1/1:2,28:30:90.17:1190,90,0	1/1:1,21:22:62.48:772,62,0	1/1:1,12:13:36.11:473,36,0	1/1:1,19:20:60.09:800,60,0	1/1:1,12:13:36.12:508,36,0	1/1:1,9:10:21.07:294,21,0	1/1:0,7:7:21.07:311,21,0	1/1:0,8:7:21.07:313,21,0	1/1:0,10:10:30.10:409,30,0	1/1:3,18:21:42.14:579,42,0	1/1:0,7:7:21.07:274,21,0	1/1:2,4:6:9.03:122,9,0	1/1:0,12:12:33.05:404,33,0	1/1:0,10:10:30.10:413,30,0	1/1:0,11:13:36.01:497,36,0	1/1:0,13:13:39.10:517,39,0	1/1:3,6:9:24.08:360,24,0
chr10	34207363	.	AGT	A	6652.48	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=12.861;DP=412;FS=0.435;HRun=0;HaplotypeScore=173.1550;InbreedingCoeff=0.9313;MQ=87.63;MQ0=0;MQRankSum=-14.036;QD=21.05;ReadPosRankSum=4.419;VQSLOD=4.7396;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,129,2542	1/1:2,0:2:5.96:43,6,0	0/0:27,0:27:59.38:0,59,1268	0/0:26,0:26:73.02:0,73,1253	1/1:6,1:7:20.63:154,21,0	1/1:12,0:12:35.89:283,36,0	1/1:18,0:18:53.63:408,54,0	1/1:16,0:16:47.82:379,48,0	1/1:20,0:20:58.24:422,58,0	1/1:11,1:12:29.95:244,30,0	1/1:6,1:7:17.24:97,17,0	1/1:29,0:29:78:619,78,0	1/1:22,0:22:58.63:420,59,0	1/1:12,0:12:35.81:278,36,0	1/1:19,0:19:56.78:442,57,0	1/1:12,0:12:35.86:278,36,0	1/1:14,0:14:35.91:336,36,0	1/1:7,0:7:20.94:167,21,0	1/1:8,0:7:20.93:164,21,0	1/1:10,0:10:29.68:213,30,0	1/1:19,0:19:41.69:314,42,0	1/1:7,2:9:20.55:138,21,0	1/1:6,0:6:8.93:64,9,0	1/1:12,0:12:29.36:212,29,0	1/1:11,0:11:32.77:266,33,0	1/1:13,0:13:32.88:259,33,0	1/1:13,0:12:38.86:304,39,0	1/1:6,0:6:17.97:147,18,0
chr10	34207365	.	T	TGAA	23809.06	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=11.067;DP=474;FS=1.419;HRun=0;HaplotypeScore=150.7549;InbreedingCoeff=0.9521;MQ=83.19;MQ0=0;MQRankSum=-13.917;QD=62.82;ReadPosRankSum=2.361;VQSLOD=6.0322;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,126,2332	1/1:2,1:3:8.99:162,9,0	0/0:27,0:27:70.01:0,70,1185	0/0:25,0:25:61.83:0,62,1077	1/1:1,6:7:21.07:419,21,0	1/1:0,12:12:36.12:844,36,0	1/1:2,18:20:60.21:1388,60,0	1/1:9,16:25:75.25:1727,75,0	1/1:7,19:26:78.27:1767,78,0	1/1:3,11:14:36.12:858,36,0	1/1:2,5:7:18.06:363,18,0	1/1:2,29:31:93.32:2122,93,0	1/1:7,21:28:81.28:1777,81,0	1/1:2,12:14:39.09:825,39,0	1/1:5,19:24:72.20:1616,72,0	1/1:4,12:16:42.10:932,42,0	1/1:8,9:17:45.11:929,45,0	1/1:1,7:8:21.07:507,21,0	1/1:4,8:11:30.10:730,30,0	1/1:2,10:12:36.12:831,36,0	1/1:5,18:23:54.66:1256,55,0	1/1:4,7:11:27.09:616,27,0	1/1:3,4:7:9.03:205,9,0	1/1:2,12:14:37.37:813,37,0	1/1:2,10:12:36.12:811,36,0	1/1:5,11:16:39.13:926,39,0	1/1:1,12:12:39.13:879,39,0	1/1:1,6:7:21.07:507,21,0
chr10	34207664	.	CTT	C	1663.73	PASS	AB=0.993;AC=40;AF=0.741;AN=54;BaseQRankSum=-2.123;DP=421;FS=5.413;HRun=3;HaplotypeScore=129.0894;InbreedingCoeff=0.1177;MQ=47.88;MQ0=11;MQRankSum=0.250;QD=4.60;ReadPosRankSum=-1.277;VQSLOD=-0.5108;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:12.20:0,12,343	1/1:4,0:4:0.89:2,1,0	0/1:21,0:7:5.07:5,0,67	0/1:48,0:20:14.54:15,0,131	1/1:10,2:12:5.65:47,6,0	0/0:16,0:16:1.36:0,1,4	1/1:20,0:19:14.69:138,15,0	1/1:9,0:8:15.83:105,16,0	1/1:20,0:18:16.60:119,17,0	1/1:13,0:12:19.94:178,20,0	0/1:6,0:6:0:0,0,0	0/1:18,0:18:28.67:96,0,29	1/1:17,0:17:6.42:99,6,0	1/1:6,0:6:5.87:42,6,0	1/1:21,0:21:2.18:24,2,0	0/1:19,0:19:1.88:27,0,2	0/1:15,0:15:10.56:109,0,11	0/1:8,0:8:7.98:52,0,8	1/1:11,0:10:6.95:135,7,0	0/0:11,0:11:3.46:0,3,24	./.	1/1:14,1:15:3.25:50,3,0	1/1:8,1:8:7.90:71,8,0	1/1:12,1:13:8.10:55,8,0	1/1:12,0:12:0.15:18,0,0	0/1:16,1:17:26.08:155,0,26	1/1:19,0:19:13.19:126,13,0	1/1:9,0:8:20.70:135,21,0
chr10	34207675	.	TCCCC	T	1781.54	PASS	AB=0.954;AC=37;AF=0.712;AN=52;BaseQRankSum=1.872;DP=348;FS=2.977;HRun=5;HaplotypeScore=126.4391;InbreedingCoeff=0.1481;MQ=54.69;MQ0=4;MQRankSum=-4.852;QD=6.55;ReadPosRankSum=-1.229;VQSLOD=-0.6007;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:35.63:0,36,1090	./.	0/0:12,0:10:18.05:0,18,563	0/0:30,0:21:52.60:0,53,1021	1/1:14,0:14:9:92,9,0	1/1:13,0:13:2.36:17,2,0	1/1:17,0:16:6.70:77,7,0	1/1:7,0:7:17.95:173,18,0	1/1:16,0:14:9.65:103,10,0	1/1:9,0:9:8.53:121,9,0	0/1:7,0:7:0:0,0,0	0/1:14,0:14:50.18:50,0,53	0/1:14,0:14:4.03:151,0,4	1/1:8,0:8:2.68:33,3,0	1/1:17,0:17:2.05:24,2,0	0/1:19,0:19:16.40:93,0,16	0/1:14,0:14:0.31:149,0,0	0/1:4,0:4:28.19:36,0,28	1/1:6,0:6:0.32:67,0,0	1/1:8,1:9:5.90:41,6,0	./.	1/1:2,9:11:4.99:24,5,0	1/1:9,0:8:2.54:25,3,0	0/1:3,7:10:0:0,0,0	1/1:12,0:12:5.68:51,6,0	0/1:16,0:16:44.82:246,0,45	0/1:20,0:20:2.34:236,0,2	1/1:6,0:5:9.03:116,9,0
chr10	34207798	.	AATTGGCTC	A	20673.55	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=10.626;DP=439;FS=46.948;HRun=0;HaplotypeScore=154.6859;InbreedingCoeff=0.9360;MQ=92.79;MQ0=0;MQRankSum=-12.874;QD=59.24;ReadPosRankSum=2.929;VQSLOD=2.7232;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,111,4624	1/1:0,10:10:30.10:847,30,0	0/0:25,0:25:63.21:0,63,2454	0/0:26,0:26:69.24:0,69,2458	1/1:2,31:32:56.91:1485,57,0	1/1:3,12:15:27.06:698,27,0	1/1:3,7:10:18.03:445,18,0	1/1:4,13:17:33.11:781,33,0	1/1:1,8:9:21.07:594,21,0	1/1:2,21:23:63.22:1782,63,0	1/1:1,11:13:24.04:582,24,0	1/1:1,19:20:42.14:1185,42,0	1/1:2,12:14:33.06:810,33,0	1/1:0,10:10:27.09:764,27,0	1/1:1,11:12:27.09:764,27,0	1/1:3,16:19:42.14:1188,42,0	1/1:2,11:13:24.08:677,24,0	1/1:1,4:5:12.04:340,12,0	1/1:3,7:10:18.05:449,18,0	1/1:3,18:21:45.15:1196,45,0	1/1:0,9:9:18.02:414,18,0	1/1:0,12:12:30.10:833,30,0	1/1:1,13:14:42.14:1182,42,0	1/1:2,5:7:6.02:170,6,0	1/1:2,13:15:36.08:954,36,0	1/1:1,11:12:33.07:835,33,0	1/1:0,19:19:45.15:1273,45,0	1/1:2,5:7:15.05:424,15,0
chr10	34208917	.	A	AG	14367.97	PASS	AB=0.897;AC=53;AF=0.946;AN=56;BaseQRankSum=4.064;DP=508;FS=22.462;HRun=3;HaplotypeScore=363.3039;InbreedingCoeff=0.5495;MQ=59.53;MQ0=0;MQRankSum=-6.876;QD=29.14;ReadPosRankSum=4.240;VQSLOD=-0.0906;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,28:35:57.19:852,57,0	1/1:1,2:3:5.99:64,6,0	0/1:23,2:17:14.17:14,0,224	0/0:14,0:11:11.09:0,11,97	1/1:2,18:20:33.01:476,33,0	1/1:6,20:26:63.13:866,63,0	1/1:3,12:15:34.67:480,35,0	1/1:1,15:16:48.12:679,48,0	1/1:2,13:15:36.12:525,36,0	1/1:2,27:29:84.20:1210,84,0	1/1:2,18:20:33.11:472,33,0	1/1:3,18:21:48.12:670,48,0	1/1:5,15:20:42.14:599,42,0	1/1:2,14:16:39.05:507,39,0	1/1:3,18:21:51.12:698,51,0	1/1:3,13:16:48.03:625,48,0	1/1:3,10:13:30.10:432,30,0	1/1:3,5:8:12.04:170,12,0	1/1:1,7:8:21.07:313,21,0	1/1:3,13:16:36.12:524,36,0	1/1:2,9:10:11.68:121,12,0	1/1:3,26:29:54.18:760,54,0	1/1:8,22:30:42.09:560,42,0	1/1:3,9:12:14.78:218,15,0	1/1:3,16:19:43.78:634,44,0	1/1:0,18:18:54.18:778,54,0	1/1:5,18:23:60.20:864,60,0	1/1:0,7:7:18.06:258,18,0
chr10	34208922	.	A	AG	6236.16	PASS	AB=0.933;AC=53;AF=0.946;AN=56;BaseQRankSum=6.016;DP=473;FS=19.164;HRun=4;HaplotypeScore=379.7602;InbreedingCoeff=0.4892;MQ=53.36;MQ0=0;MQRankSum=-4.527;QD=13.89;ReadPosRankSum=5.645;VQSLOD=1.1170;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:14,17:31:42.13:528,42,0	1/1:3,0:3:2.94:18,3,0	0/0:24,0:13:37.79:0,38,333	0/1:13,0:9:20.14:20,0,48	1/1:19,0:19:29.69:242,30,0	1/1:23,0:23:51.28:355,51,0	1/1:14,0:14:29.69:220,30,0	1/1:17,0:17:41.63:313,42,0	1/1:15,0:15:27.04:177,27,0	1/1:29,0:29:71.32:475,71,0	1/1:19,0:19:32.38:228,32,0	1/1:17,0:17:41.41:275,41,0	1/1:17,0:17:35.08:219,35,0	1/1:16,0:16:18.50:147,18,0	1/1:20,0:20:47.22:299,47,0	1/1:17,0:17:36.13:265,36,0	1/1:12,0:12:32.53:213,33,0	1/1:4,0:5:5.24:60,5,0	1/1:8,0:8:10.24:88,10,0	1/1:16,0:16:37.16:250,37,0	1/1:9,0:8:8.94:73,9,0	1/1:26,0:26:45.81:287,46,0	1/1:25,0:25:34.55:243,35,0	1/1:11,0:11:11.47:70,11,0	1/1:18,0:18:44.29:284,44,0	1/1:18,0:18:46.87:343,47,0	1/1:23,0:23:55.87:405,56,0	1/1:7,0:7:20.74:137,21,0
chr10	34208924	.	G	GA	11416.71	PASS	AB=1.000;AC=51;AF=0.911;AN=56;BaseQRankSum=6.997;DP=460;FS=28.424;HRun=0;HaplotypeScore=357.0145;InbreedingCoeff=0.6943;MQ=56.36;MQ0=0;MQRankSum=-4.775;QD=27.31;ReadPosRankSum=4.534;VQSLOD=0.3293;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:29:66.94:199,0,67	1/1:3,2:5:7.39:59,7,0	0/0:25,0:13:37.34:0,37,440	0/0:17,0:12:15.15:0,15,139	1/1:0,18:18:33.02:433,33,0	1/1:0,23:23:50.80:663,51,0	1/1:0,13:13:31.04:403,31,0	1/1:5,16:21:51.24:663,51,0	1/1:2,11:13:33.44:383,33,0	1/1:1,26:27:78.19:1008,78,0	1/1:2,15:17:33.10:416,33,0	1/1:0,15:15:42.13:532,42,0	1/1:1,15:16:40.02:458,40,0	1/1:1,14:15:33.24:346,33,0	1/1:2,19:21:49.56:593,50,0	1/1:3,13:16:39.21:466,39,0	1/1:1,11:12:30.09:385,30,0	1/1:1,4:5:9.92:127,10,0	1/1:2,5:7:14.98:179,15,0	1/1:0,16:16:39.08:487,39,0	1/1:0,8:7:11.71:133,12,0	1/1:0,24:24:48.12:576,48,0	1/1:0,23:23:41.96:490,42,0	1/1:1,7:8:8.66:106,9,0	1/1:0,18:18:45.14:554,45,0	1/1:2,16:18:51.11:679,51,0	1/1:3,19:23:65.55:800,66,0	1/1:0,7:7:21.07:279,21,0
chr10	34208942	.	G	GA	7084.31	PASS	AB=0.953;AC=54;AF=0.964;AN=56;BaseQRankSum=3.060;DP=449;FS=5.083;HRun=2;HaplotypeScore=369.4419;InbreedingCoeff=-0.0441;MQ=54.41;MQ0=0;MQRankSum=-2.959;QD=15.78;ReadPosRankSum=2.870;VQSLOD=3.3767;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,26:29:70.68:493,71,0	1/1:0,6:6:17.74:117,18,0	0/1:21,1:14:29.03:29,0,159	0/1:17,1:13:19.85:44,0,20	1/1:0,16:16:29.19:170,29,0	1/1:0,19:19:52.95:348,53,0	1/1:2,13:15:44.15:331,44,0	1/1:4,20:24:65.46:498,65,0	1/1:1,12:13:38.01:221,38,0	1/1:3,22:25:70.63:528,71,0	1/1:2,12:14:29.87:178,30,0	1/1:0,14:14:41.09:256,41,0	1/1:0,15:15:43.98:274,44,0	1/1:0,16:16:41.52:245,42,0	1/1:1,24:25:70.77:452,71,0	1/1:1,17:18:53.15:362,53,0	1/1:0,11:11:26.44:160,26,0	1/1:0,3:3:5.87:34,6,0	1/1:3,8:11:23.94:204,24,0	1/1:1,15:16:40.55:228,41,0	1/1:0,5:4:2.49:18,2,0	1/1:4,19:23:58.62:381,59,0	1/1:0,19:19:42.56:240,43,0	1/1:1,6:7:5.74:34,6,0	1/1:2,17:19:52.11:313,52,0	1/1:0,12:12:35.48:282,35,0	1/1:3,22:25:71.49:478,71,0	1/1:1,7:8:23.77:166,24,0
chr10	34209024	.	C	CCAGGGAGAGATCT	64443.99	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-5.296;DP=589;FS=8.801;HRun=0;HaplotypeScore=220.8938;InbreedingCoeff=0.9313;MQ=69.74;MQ0=0;MQRankSum=-10.618;QD=128.63;ReadPosRankSum=6.298;VQSLOD=3.7407;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:96.29:0,96,3496	1/1:3,3:9:21.07:957,21,0	0/0:27,0:27:75.26:0,75,2517	0/0:21,0:21:63.17:0,63,1844	1/1:4,23:31:66.23:4230,66,0	1/1:2,14:22:42.14:2637,42,0	1/1:8,3:17:30.09:1133,30,0	1/1:21,3:28:72.23:3407,72,0	1/1:4,17:23:63.22:4013,63,0	1/1:9,11:25:75.25:4525,75,0	1/1:7,13:22:48.16:3122,48,0	1/1:7,12:23:51.17:3306,51,0	1/1:5,10:18:36.08:2170,36,0	1/1:5,11:16:39.13:2559,39,0	1/1:8,18:30:63.12:3714,63,0	1/1:6,16:27:59.88:3725,60,0	1/1:2,2:9:15.05:767,15,0	1/1:4,4:14:21.07:1390,21,0	1/1:10,1:14:33.11:1468,33,0	1/1:4,7:15:24.08:1580,24,0	1/1:3,0:6:2.99:24,3,0	1/1:11,15:28:60.21:3802,60,0	1/1:5,12:21:42.14:2615,42,0	1/1:6,10:19:36.12:2260,36,0	1/1:5,12:21:42.14:2763,42,0	1/1:3,14:23:69.24:4063,69,0	1/1:9,10:24:45.15:2626,45,0	1/1:4,7:13:24.08:1589,24,0
chr10	34210271	.	AACT	A	12692.79	PASS	AB=0.630;AC=43;AF=0.768;AN=56;BaseQRankSum=18.639;DP=651;FS=5.637;HRun=0;HaplotypeScore=230.0904;InbreedingCoeff=0.9231;MQ=68.63;MQ0=0;MQRankSum=-16.668;QD=25.18;ReadPosRankSum=7.926;VQSLOD=3.9722;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:87.30:0,87,2011	1/1:3,9:12:17.87:279,18,0	0/0:21,0:21:62.02:0,62,1288	0/0:19,0:19:57.05:0,57,1137	1/1:10,22:32:43.32:603,43,0	1/1:3,16:19:19.29:488,19,0	1/1:6,15:21:29.09:492,29,0	0/1:14,20:34:1.12:631,0,1	1/1:5,19:24:23.29:594,23,0	1/1:5,22:27:62.72:794,63,0	1/1:1,13:14:26.89:373,27,0	0/0:34,0:34:99:0,102,2412	1/1:2,16:18:36.08:514,36,0	1/1:5,16:21:44.95:584,45,0	1/1:11,28:39:46.51:939,47,0	1/1:6,30:35:74.42:978,74,0	1/1:4,14:18:40.35:466,40,0	1/1:2,10:12:30.09:354,30,0	1/1:3,17:20:36.66:582,37,0	1/1:8,21:29:8.53:653,9,0	1/1:9,11:20:25.31:297,25,0	1/1:2,22:24:68.83:713,69,0	0/0:15,0:15:45.15:0,45,1027	0/0:28,0:28:75.26:0,75,1773	1/1:5,21:26:60.90:738,61,0	1/1:5,20:25:47.35:705,47,0	1/1:6,22:28:57.09:742,57,0	1/1:0,5:5:15.04:173,15,0
chr10	34210278	.	AC	A	8736.46	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=17.885;DP=615;FS=9.433;HRun=2;HaplotypeScore=212.3427;InbreedingCoeff=0.9962;MQ=69.11;MQ0=0;MQRankSum=-15.373;QD=18.55;ReadPosRankSum=4.073;VQSLOD=3.7734;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:87.28:0,87,1284	1/1:1,9:10:28.89:186,29,0	0/0:22,0:22:66.22:0,66,989	0/0:16,0:16:47.37:0,47,681	1/1:5,22:27:48.93:364,49,0	1/1:5,16:21:51.48:372,51,0	1/1:6,15:21:48.17:354,48,0	1/1:10,20:30:69.70:549,70,0	1/1:4,19:23:50.43:394,50,0	1/1:1,22:23:68.57:519,69,0	1/1:1,13:14:37.75:244,38,0	0/0:34,0:34:99:0,102,1504	1/1:3,16:19:55.29:380,55,0	1/1:3,16:19:55.75:380,56,0	1/1:6,28:34:78.44:595,78,0	1/1:3,30:33:90:648,90,0	1/1:3,14:17:42.71:310,43,0	1/1:1,10:11:32.10:237,32,0	1/1:3,17:20:51.54:416,52,0	1/1:6,21:27:59.59:452,60,0	1/1:2,11:13:25.59:186,26,0	1/1:4,22:26:76:505,76,0	0/0:16,0:16:48.12:0,48,692	0/0:26,0:26:78.26:0,78,1165	1/1:3,21:24:66.64:450,67,0	1/1:8,20:28:80.69:563,81,0	1/1:4,22:26:74.83:521,75,0	1/1:0,5:5:14.91:111,15,0
chr10	34210537	.	A	AC	1632.67	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-7.782;DP=596;FS=2.062;HRun=2;HaplotypeScore=126.8576;InbreedingCoeff=0.9831;MQ=88.57;MQ0=0;MQRankSum=-2.641;QD=37.97;ReadPosRankSum=-0.615;VQSLOD=3.0079;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,42:43:99:1728,120,0	0/0:5,0:5:15.05:0,15,186	0/0:26,0:26:78.16:0,78,910	0/0:19,0:19:54.13:0,54,619	0/0:14,0:14:42.13:0,42,520	0/0:18,0:18:54.17:0,54,669	0/0:26,0:26:75.24:0,75,929	0/0:28,0:28:84.23:0,84,998	0/0:18,0:18:45.14:0,45,558	0/0:21,0:21:60.18:0,60,742	0/0:11,0:11:33.10:0,33,407	0/0:28,0:28:81.24:0,81,991	0/0:28,0:28:84.26:0,84,1041	0/0:18,0:18:48.15:0,48,595	0/0:21,0:21:60.15:0,60,716	0/0:17,0:17:51.16:0,51,632	0/0:48,0:48:99:0,135,1673	0/0:23,0:23:69.20:0,69,842	0/0:14,0:14:42.13:0,42,521	0/0:12,0:12:30.08:0,30,359	0/0:23,0:23:66.17:0,66,791	0/0:17,0:17:51.16:0,51,632	0/0:15,0:15:42.13:0,42,521	0/0:24,0:24:63.17:0,63,781	0/0:15,0:15:42.12:0,42,508	0/0:20,0:20:57.18:0,57,707	0/0:34,0:34:93.29:0,93,1152	0/0:10,0:10:30.09:0,30,372
chr10	34210798	.	T	TC	170.83	PASS	AB=0.816;AC=5;AF=0.089;AN=56;BaseQRankSum=-2.130;DP=560;FS=0.000;HRun=0;HaplotypeScore=122.2299;InbreedingCoeff=-0.1206;MQ=65.85;MQ0=1;MQRankSum=-6.857;QD=2.06;ReadPosRankSum=-5.865;VQSLOD=0.4808;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,1:34:55.86:0,56,1090	0/1:4,1:5:3.19:3,0,59	0/0:19,0:17:50.50:0,51,615	0/0:14,0:11:31:0,31,364	0/1:17,5:22:51.94:52,0,186	0/0:21,0:21:49.80:0,50,261	0/0:19,0:19:39.69:0,40,221	0/0:42,0:41:22.17:0,22,330	0/0:21,2:23:23.75:0,24,248	0/0:21,1:20:28.19:0,28,161	0/0:14,2:15:39.59:0,40,212	0/1:16,8:24:99:159,0,594	0/0:12,0:12:1.07:0,1,142	0/0:11,3:13:14.66:0,15,145	0/0:26,1:27:64.37:0,64,368	0/1:12,3:15:30.53:31,0,116	0/0:24,1:25:62.69:0,63,371	0/0:25,0:25:70.45:0,70,359	0/0:16,0:16:41.71:0,42,172	0/0:24,1:25:20.42:0,20,194	0/0:17,2:18:30.77:0,31,155	0/0:10,0:10:25.20:0,25,128	0/0:20,0:20:5.07:0,5,350	0/1:14,3:17:36.07:36,0,407	0/0:21,1:22:60.27:0,60,343	0/0:14,1:15:36.68:0,37,161	0/0:18,2:20:3.54:0,4,192	0/0:15,1:16:3.49:0,3,144
chr10	34210837	.	T	TC	2350.04	PASS	AB=0.981;AC=25;AF=0.446;AN=56;BaseQRankSum=4.229;DP=574;FS=19.935;HRun=0;HaplotypeScore=109.7621;InbreedingCoeff=-0.8123;MQ=50.71;MQ0=2;MQRankSum=-5.504;QD=4.30;ReadPosRankSum=4.198;VQSLOD=1.8030;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:28:98.62:99,0,414	0/1:7,0:7:36.74:37,0,67	0/0:10,0:5:1.98:0,2,54	0/0:5,0:3:2.78:0,3,26	0/1:36,1:35:99:108,0,268	0/1:19,0:19:99:135,0,139	0/1:22,0:21:99:108,0,114	0/1:32,0:30:99:181,0,176	0/1:33,0:33:93.05:93,0,297	0/1:28,0:26:99:197,0,125	0/1:25,0:24:89.19:89,0,127	0/1:23,0:23:24.15:116,0,24	0/1:9,0:9:20.81:83,0,21	0/1:20,0:18:87.30:87,0,116	0/1:25,1:24:99:213,0,166	0/1:22,0:21:71.92:72,0,241	0/1:23,0:23:43.80:44,0,184	0/1:18,0:18:61.16:179,0,61	0/0:12,0:12:30.29:0,30,217	0/1:12,14:26:53.15:53,0,126	0/1:18,0:17:66.67:67,0,190	0/1:14,0:14:15.93:67,0,16	0/1:18,0:18:1.41:19,0,1	0/1:17,1:17:22.46:52,0,22	0/1:27,0:27:99:187,0,121	0/1:16,0:16:52.55:53,0,193	0/1:28,0:28:99:122,0,253	0/1:10,0:10:39.11:39,0,80
chr10	34211317	.	A	AC	1170.62	PASS	AB=0.836;AC=14;AF=0.250;AN=56;BaseQRankSum=13.961;DP=762;FS=30.958;HRun=0;HaplotypeScore=265.7421;InbreedingCoeff=-0.3343;MQ=55.48;MQ0=3;MQRankSum=-12.363;QD=2.80;ReadPosRankSum=-6.272;VQSLOD=1.1364;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:81.87:0,82,1029	0/1:8,0:8:4.01:4,0,232	0/0:34,0:25:51.87:0,52,685	0/0:24,0:17:20.99:0,21,381	0/0:25,0:25:29.05:0,29,632	0/1:22,6:28:99:124,0,608	0/1:23,5:28:63.66:64,0,795	0/0:26,0:22:57.13:0,57,728	0/1:28,4:32:19.64:20,0,752	0/0:25,0:25:59.38:0,59,712	0/0:32,4:36:38.01:0,38,1054	0/0:22,0:22:60.05:0,60,798	0/1:29,7:36:55.50:56,0,826	0/1:17,6:22:87.36:87,0,464	0/1:34,7:41:99:123,0,897	0/1:33,11:44:99:202,0,956	0/0:21,0:21:30.51:0,31,505	0/1:21,3:24:30.43:30,0,452	0/1:14,2:16:13.38:13,0,470	0/0:27,0:27:41.39:0,41,809	0/0:4,3:7:4.20:0,4,83	0/0:18,0:18:10.30:0,10,315	0/0:18,0:18:40.28:0,40,518	0/0:31,0:31:64.07:0,64,706	0/1:32,9:41:94.23:94,0,1025	0/1:28,12:40:99:225,0,857	0/1:33,12:45:99:209,0,921	0/1:7,5:12:43.28:73,0,43
chr10	34211328	.	A	AC	3614.73	PASS	AB=0.798;AC=19;AF=0.339;AN=56;BaseQRankSum=12.991;DP=836;FS=41.113;HRun=0;HaplotypeScore=286.8931;InbreedingCoeff=-0.4779;MQ=50.70;MQ0=3;MQRankSum=-11.033;QD=5.96;ReadPosRankSum=-4.233;VQSLOD=1.3816;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:69.72:0,70,1036	0/1:10,0:10:10.74:11,0,189	0/0:27,0:19:44.58:0,45,545	0/0:20,0:14:15.06:0,15,240	0/1:40,0:40:33.82:34,0,538	0/1:20,10:30:99:309,0,573	0/1:22,8:30:99:171,0,603	0/1:32,8:36:76.97:77,0,753	0/1:22,10:32:99:175,0,679	0/1:34,0:34:47.32:47,0,574	0/1:29,8:36:99:207,0,740	0/0:24,0:24:51.04:0,51,708	0/1:21,14:35:99:215,0,707	0/1:13,9:21:99:164,0,382	0/1:35,12:47:99:281,0,843	0/1:27,17:44:99:351,0,848	0/0:18,0:18:1.17:0,1,401	0/1:17,6:23:99:116,0,482	0/1:25,2:27:99:120,0,433	0/0:31,0:31:29.24:0,29,649	0/1:6,4:10:46.97:47,0,69	0/0:29,0:29:9.97:0,10,317	0/0:26,0:26:50.60:0,51,607	0/0:27,0:27:49.51:0,50,603	0/1:29,13:42:99:265,0,921	0/1:28,16:44:99:441,0,759	0/1:30,19:49:99:438,0,857	0/1:4,7:11:0.17:148,0,0
chr10	34211335	.	A	AC	7092.16	PASS	AB=0.664;AC=22;AF=0.393;AN=56;BaseQRankSum=10.361;DP=867;FS=46.692;HRun=0;HaplotypeScore=275.8510;InbreedingCoeff=-0.4979;MQ=48.13;MQ0=2;MQRankSum=-6.153;QD=10.34;ReadPosRankSum=-1.282;VQSLOD=3.2204;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:70.95:0,71,1066	0/1:5,0:17:14.73:15,0,188	0/0:20,0:14:28.23:0,28,397	0/0:19,0:16:31.33:0,31,384	0/1:10,0:46:99:189,0,388	0/1:17,14:31:99:381,0,520	0/1:17,14:31:99:275,0,548	0/1:23,21:40:99:511,0,626	0/1:18,12:31:99:326,0,555	0/1:11,1:45:99:381,0,398	0/1:21,15:35:99:373,0,588	0/0:4,0:27:50.25:0,50,358	0/1:19,15:34:99:349,0,552	0/1:11,10:20:99:271,0,276	0/1:26,15:47:99:601,0,691	0/1:21,17:39:99:506,0,632	0/1:11,1:23:7.36:7,0,372	0/1:10,7:21:99:209,0,376	0/1:12,16:28:99:512,0,319	0/1:12,0:35:19.11:19,0,532	0/1:5,9:14:40.36:131,0,40	0/0:7,0:34:6.17:0,6,313	0/0:4,0:26:49.95:0,50,447	0/0:8,0:28:42.63:0,43,394	0/1:27,17:45:99:398,0,813	0/1:20,24:45:99:784,0,607	0/1:18,26:46:99:651,0,540	1/1:0,7:7:20.99:204,21,0
chr10	34211357	.	AT	A	1374.56	PASS	AB=0.832;AC=13;AF=0.232;AN=56;BaseQRankSum=7.012;DP=782;FS=6.413;HRun=1;HaplotypeScore=287.4882;InbreedingCoeff=-0.3031;MQ=65.93;MQ0=0;MQRankSum=-9.398;QD=3.44;ReadPosRankSum=2.148;VQSLOD=-0.1317;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:81.21:0,81,1205	0/0:17,0:17:24.08:0,24,364	0/0:31,0:28:77.61:0,78,1208	0/0:21,0:20:54.10:0,54,810	0/0:37,0:37:48.12:0,48,713	0/1:18,8:26:99:197,0,634	0/1:20,5:25:89.59:90,0,652	0/0:38,0:37:39.65:0,40,1421	0/1:21,5:26:53.31:53,0,860	0/0:31,0:31:71.45:0,71,1030	0/1:23,7:29:99:139,0,819	0/0:29,0:29:56.12:0,56,476	0/1:25,2:27:34.68:35,0,1016	0/1:15,5:20:85.43:85,0,610	0/1:30,10:40:99:185,0,1041	0/1:33,8:41:99:129,0,1342	0/0:15,0:15:21.03:0,21,284	0/1:16,1:17:29.55:30,0,374	0/1:15,4:19:80.54:81,0,598	0/0:21,0:21:21.07:0,21,318	0/0:19,1:20:37.59:0,38,583	0/0:27,0:27:33.07:0,33,476	0/0:30,0:30:62.52:0,63,683	0/0:22,0:22:22.89:0,23,190	0/1:29,13:42:99:262,0,1070	0/1:32,9:41:99:155,0,1281	0/1:38,8:46:89.33:89,0,1416	0/0:13,0:14:42.02:0,42,572
chr10	34211359	.	ACGG	A	1806.60	PASS	AB=0.839;AC=13;AF=0.232;AN=56;BaseQRankSum=7.756;DP=784;FS=8.453;HRun=0;HaplotypeScore=311.5230;InbreedingCoeff=-0.3000;MQ=67.56;MQ0=0;MQRankSum=-10.112;QD=4.55;ReadPosRankSum=3.218;VQSLOD=0.7124;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:78.27:0,78,1831	0/0:17,0:17:24.08:0,24,566	0/0:30,0:29:81.26:0,81,1760	0/0:22,0:21:54.17:0,54,1162	0/0:37,0:37:48.16:0,48,1090	0/1:17,8:25:99:238,0,972	0/1:19,5:24:99:107,0,992	0/0:38,0:37:76.57:0,77,2218	0/1:21,5:26:90.25:90,0,1376	0/0:32,0:32:73.18:0,73,1663	0/1:23,7:29:99:173,0,1275	0/0:29,0:29:57.18:0,57,1011	0/1:24,2:26:9.60:10,0,1519	0/1:19,2:21:94.94:95,0,997	0/1:31,10:41:99:236,0,1709	0/1:33,8:41:99:174,0,2122	0/0:14,0:14:21.07:0,21,455	0/1:15,1:16:26.94:27,0,669	0/1:14,4:18:95.40:95,0,869	0/0:21,0:21:21.07:0,21,495	0/0:21,1:22:44.94:0,45,1014	0/0:29,0:29:39.13:0,39,917	0/0:31,0:31:66.69:0,67,1335	0/0:22,0:22:24.06:0,24,420	0/1:29,13:42:99:368,0,1714	0/1:32,9:41:99:197,0,2076	0/1:38,8:46:99:151,0,2215	0/0:14,0:14:42.14:0,42,987
chr10	34211366	.	AAT	A	1089.79	PASS	AB=0.835;AC=12;AF=0.214;AN=56;BaseQRankSum=9.141;DP=798;FS=13.049;HRun=0;HaplotypeScore=303.7708;InbreedingCoeff=-0.2712;MQ=69.60;MQ0=0;MQRankSum=-9.257;QD=2.86;ReadPosRankSum=2.307;VQSLOD=0.5870;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:75.26:0,75,1505	0/0:17,0:17:24.08:0,24,487	0/0:30,0:28:78.02:0,78,1427	0/0:23,0:23:60.21:0,60,1187	0/0:39,0:39:51.18:0,51,1023	0/1:17,8:25:99:148,0,890	0/1:20,5:25:79.85:80,0,905	0/0:36,0:36:99:0,105,2084	0/1:22,5:27:55.90:56,0,1255	0/0:34,0:34:80.43:0,80,1509	0/1:22,7:29:99:104,0,1191	0/0:29,0:29:57.15:0,57,1112	0/0:25,2:27:25.44:0,25,1453	0/1:21,2:23:44.50:45,0,954	0/1:34,10:44:99:164,0,1675	0/1:33,8:41:99:100,0,1881	0/0:16,0:16:30.02:0,30,505	0/1:16,1:17:11.16:11,0,606	0/1:14,4:18:64.93:65,0,759	0/0:21,0:21:21.07:0,21,426	0/0:21,1:22:48.16:0,48,968	0/0:31,0:31:45.15:0,45,913	0/0:30,0:30:66.17:0,66,1278	0/0:21,0:21:27.09:0,27,542	0/1:28,13:41:99:244,0,1462	0/1:34,9:43:99:128,0,1886	0/1:40,8:48:96.33:96,0,2041	0/0:14,0:14:42.14:0,42,851
chr10	34212006	.	C	CAAAA	6923.17	PASS	AB=0.793;AC=50;AF=0.893;AN=56;BaseQRankSum=1.064;DP=453;FS=24.476;HRun=17;HaplotypeScore=126.4021;InbreedingCoeff=0.0759;MQ=69.57;MQ0=5;MQRankSum=-3.054;QD=16.44;ReadPosRankSum=-3.104;VQSLOD=-0.1071;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:19:24.11:357,24,0	1/1:5,0:5:9.03:171,9,0	0/0:32,0:15:2.20:0,2,33	0/1:27,0:19:19.79:20,0,20	1/1:18,0:14:10.96:58,11,0	1/1:8,0:16:12.04:178,12,0	1/1:5,1:8:6.02:113,6,0	1/1:24,1:26:35.20:539,35,0	1/1:14,0:15:28.05:421,28,0	1/1:18,2:17:18.06:305,18,0	1/1:14,0:15:23.16:352,23,0	0/1:14,0:15:44.28:211,0,44	1/1:12,0:12:20.76:346,21,0	1/1:7,1:9:18.06:349,18,0	1/1:10,0:9:12.04:221,12,0	1/1:15,1:16:15.05:284,15,0	1/1:10,1:14:15.05:281,15,0	1/1:7,1:7:7.84:120,8,0	1/1:13,2:15:27.09:493,27,0	1/1:13,0:21:29.93:459,30,0	1/1:11,0:11:16.30:276,16,0	1/1:10,1:10:10.85:163,11,0	0/1:6,0:14:26.09:70,0,26	0/1:4,0:9:25.33:43,0,25	1/1:12,1:15:24.01:398,24,0	1/1:10,0:12:18.06:264,18,0	1/1:19,0:19:27:415,27,0	1/1:11,0:11:2.88:16,3,0
chr10	34212475	.	AATACATACATAC	A	3037.46	PASS	AC=6;AF=0.115;AN=52;BaseQRankSum=-2.948;DP=717;FS=1.419;HRun=0;HaplotypeScore=283.5677;InbreedingCoeff=0.9701;MQ=51.76;MQ0=7;MQRankSum=-7.442;QD=37.97;ReadPosRankSum=0.127;VQSLOD=3.0030;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:45:66.23:0,66,3107	0/0:8,0:7:15.03:0,15,614	./.	./.	0/0:35,0:34:72.24:0,72,1825	0/0:18,0:18:27.08:0,27,683	0/0:21,0:22:33.11:0,33,894	0/0:48,0:45:42.14:0,42,1722	0/0:18,0:19:39.13:0,39,1023	0/0:37,0:34:63.22:0,63,3104	0/0:19,0:23:27.09:0,27,1325	1/1:15,23:37:60.16:1974,60,0	0/0:23,0:22:33.11:0,33,1543	0/0:23,0:26:51.18:0,51,2584	0/0:25,0:25:45.15:0,45,2032	0/0:35,0:35:66.20:0,66,2645	0/0:18,0:18:21.07:0,21,1043	0/0:14,0:16:21.07:0,21,973	0/0:14,0:13:18.06:0,18,865	0/0:30,0:31:45.15:0,45,2198	0/0:26,0:26:24.08:0,24,1048	0/0:28,0:24:42.14:0,42,1869	1/1:9,10:19:30.01:852,30,0	1/1:16,7:23:14.97:350,15,0	0/0:28,0:27:48.16:0,48,2134	0/0:27,0:24:42.13:0,42,2021	0/0:30,0:28:54.19:0,54,2418	0/0:3,0:5:12.04:0,12,543
chr10	34212517	.	TACA	T	3106.60	PASS	AB=1.000;AC=25;AF=0.446;AN=56;BaseQRankSum=-2.567;DP=673;FS=1.686;HRun=0;HaplotypeScore=177.8213;InbreedingCoeff=-0.2574;MQ=54.31;MQ0=8;MQRankSum=6.430;QD=6.13;ReadPosRankSum=0.360;VQSLOD=3.0687;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:89.34:0,89,1767	0/1:12,0:10:27.34:27,0,172	0/0:17,0:13:38.99:0,39,447	0/0:11,0:6:18.06:0,18,223	1/1:10,22:29:75.51:994,76,0	1/1:7,7:14:39.15:440,39,0	1/1:15,6:21:58.01:537,58,0	0/1:44,0:37:86.40:86,0,624	1/1:10,8:18:51.03:558,51,0	0/0:38,0:32:11.53:0,12,870	0/1:19,0:17:16.63:17,0,446	0/1:28,0:27:93.81:94,0,157	0/1:26,0:25:52.15:52,0,354	0/1:28,0:28:19.93:20,0,618	0/0:21,0:20:8.72:0,9,522	0/0:26,0:25:3.25:0,3,585	0/1:15,0:15:35.90:36,0,291	0/1:16,0:16:70.75:71,0,259	0/1:25,0:23:61.05:61,0,294	0/1:34,0:34:53.29:53,0,574	0/1:19,0:19:39.51:40,0,264	0/1:34,0:29:54.82:55,0,482	0/1:21,0:21:7.55:8,0,357	0/0:17,0:17:8.42:0,8,306	0/1:27,0:24:26.51:27,0,544	0/1:29,0:24:25.84:26,0,531	0/1:32,0:29:33.48:33,0,619	0/1:13,0:13:47.12:47,0,119
chr10	34212521	.	T	TACA	5085.98	PASS	AB=0.843;AC=16;AF=0.286;AN=56;BaseQRankSum=0.772;DP=675;FS=8.857;HRun=0;HaplotypeScore=178.3829;InbreedingCoeff=-0.4005;MQ=56.26;MQ0=7;MQRankSum=-5.575;QD=12.75;ReadPosRankSum=-1.477;VQSLOD=3.8225;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,99,1597	0/1:11,1:10:99:112,0,126	0/0:18,0:13:38.62:0,39,546	0/0:14,0:9:18.53:0,19,269	0/0:32,0:29:78.15:0,78,817	0/0:15,0:15:44.85:0,45,408	0/0:20,0:20:60:0,60,582	0/0:39,0:34:68.29:0,68,717	0/0:19,0:19:54.08:0,54,551	0/1:26,13:34:99:579,0,316	0/1:19,2:19:99:236,0,175	0/0:29,0:28:72.70:0,73,918	0/1:19,7:25:99:322,0,291	0/1:18,11:29:99:497,0,317	0/1:13,8:20:99:460,0,122	0/1:18,7:25:99:489,0,199	0/0:15,0:15:42.05:0,42,498	0/1:14,1:15:99:166,0,211	0/1:22,1:22:69.72:70,0,391	0/1:24,10:34:99:418,0,424	0/1:17,0:18:99:146,0,165	0/1:25,10:30:99:385,0,367	0/0:21,0:21:53.82:0,54,733	0/0:19,0:19:41.99:0,42,545	0/1:18,7:23:99:362,0,254	0/1:19,9:23:99:356,0,251	0/1:29,3:31:99:413,0,262	0/1:12,0:12:76.22:76,0,175
chr10	34212522	.	T	TA	12618.88	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-6.848;DP=674;FS=0.397;HRun=8;HaplotypeScore=129.8782;InbreedingCoeff=0.9977;MQ=56.54;MQ0=7;MQRankSum=0.316;QD=23.63;ReadPosRankSum=0.696;VQSLOD=3.3678;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:83.95:0,84,759	1/1:4,7:10:24.03:262,24,0	0/0:18,0:13:38.86:0,39,341	0/0:15,0:10:19.99:0,20,170	1/1:25,7:29:66.15:707,66,0	1/1:7,8:15:45.05:476,45,0	1/1:8,12:20:54.14:594,54,0	1/1:8,29:33:78.14:854,78,0	1/1:11,8:19:48.12:516,48,0	1/1:11,16:33:75.20:846,75,0	1/1:7,12:19:38.78:366,39,0	0/0:30,0:29:72.03:0,72,650	1/1:3,15:24:63.19:725,63,0	1/1:4,14:29:69.05:756,69,0	1/1:6,7:20:42.12:483,42,0	1/1:7,12:25:54.09:604,54,0	1/1:2,13:15:38.95:430,39,0	1/1:3,10:14:33.10:380,33,0	1/1:10,15:24:22.71:497,23,0	1/1:4,21:34:84.02:902,84,0	1/1:6,12:18:30.05:330,30,0	1/1:4,20:29:47.44:720,47,0	0/0:21,0:21:57:0,57,509	0/0:20,0:20:41.18:0,41,370	1/1:5,13:22:50.21:568,50,0	1/1:8,12:23:50.17:557,50,0	1/1:11,18:30:63.05:684,63,0	1/1:3,10:13:33.07:360,33,0
chr10	34213143	.	CA	C	17628.98	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=9.296;DP=678;FS=7.069;HRun=2;HaplotypeScore=78.2760;InbreedingCoeff=0.9997;MQ=63.63;MQ0=7;MQRankSum=0.427;QD=33.39;ReadPosRankSum=5.267;VQSLOD=4.6619;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:93.76:0,94,1339	1/1:0,12:12:36.12:467,36,0	0/0:22,0:21:63.17:0,63,875	0/0:19,0:19:51.17:0,51,749	1/1:0,28:28:69.18:877,69,0	1/1:1,24:25:69.22:896,69,0	1/1:1,25:25:57.18:739,57,0	1/1:1,31:17:45.12:551,45,0	1/1:1,24:25:66.21:857,66,0	1/1:2,23:25:69.22:883,69,0	1/1:2,18:19:54.18:700,54,0	0/0:27,0:27:81.25:0,81,1174	1/1:1,20:21:48.16:623,48,0	1/1:1,21:22:54.18:701,54,0	1/1:0,31:31:93.30:1207,93,0	1/1:1,31:32:90.29:1168,90,0	1/1:0,20:20:57.18:736,57,0	1/1:0,13:13:36.12:467,36,0	1/1:0,11:10:30.06:371,30,0	1/1:0,27:26:78.17:974,78,0	1/1:0,51:49:99:1714,132,0	1/1:0,28:27:78.25:1013,78,0	0/0:22,0:22:63.21:0,63,942	0/0:26,1:27:78.20:0,78,1105	1/1:0,19:19:45.15:584,45,0	1/1:1,23:23:66.21:857,66,0	1/1:0,25:25:66.21:856,66,0	1/1:0,11:11:30.10:389,30,0
chr10	34213299	.	TC	T	15542.51	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=16.884;DP=613;FS=0.712;HRun=2;HaplotypeScore=152.9845;InbreedingCoeff=0.9996;MQ=63.74;MQ0=1;MQRankSum=-1.569;QD=35.01;ReadPosRankSum=5.374;VQSLOD=4.1959;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,126,1866	1/1:0,10:10:30.10:389,30,0	0/0:24,0:21:57.15:0,57,801	0/0:16,0:16:45.15:0,45,647	1/1:0,19:19:45.13:561,45,0	1/1:0,19:18:51.17:662,51,0	1/1:0,21:21:60.20:778,60,0	1/1:2,27:24:66.21:857,66,0	1/1:0,22:21:63.20:818,63,0	1/1:0,18:18:54.18:699,54,0	1/1:4,20:24:57.18:735,57,0	0/0:32,0:32:96.32:0,96,1430	1/1:0,18:18:48.16:623,48,0	1/1:1,26:27:66.21:856,66,0	1/1:0,29:29:84.27:1091,84,0	1/1:0,20:20:54.18:701,54,0	1/1:0,21:21:57.19:740,57,0	1/1:0,10:10:27.09:350,27,0	1/1:1,15:16:45.15:584,45,0	1/1:0,16:16:42.14:545,42,0	1/1:0,21:21:57.19:740,57,0	1/1:2,11:13:33.11:428,33,0	0/0:24,0:23:66.21:0,66,968	0/0:28,0:28:84.28:0,84,1251	1/1:0,20:20:60.19:775,60,0	1/1:1,29:29:84.27:1091,84,0	1/1:1,29:28:84.27:1090,84,0	1/1:0,11:11:33.11:428,33,0
chr10	34215832	.	A	ATATCTCTCTC	9924.10	PASS	AB=1.000;AC=37;AF=0.661;AN=56;BaseQRankSum=0.499;DP=661;FS=30.638;HRun=0;HaplotypeScore=213.5240;InbreedingCoeff=0.7520;MQ=65.86;MQ0=6;MQRankSum=-3.477;QD=22.10;ReadPosRankSum=-1.035;VQSLOD=2.8180;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:12.98:0,13,283	1/1:10,0:10:17.70:196,18,0	0/0:22,0:17:41.04:0,41,414	0/0:38,0:22:55.36:0,55,539	0/0:37,0:35:75.03:0,75,583	0/0:21,0:20:17.34:0,17,281	0/1:18,0:16:56.39:56,0,126	1/1:41,0:41:99:1071,110,0	0/0:26,0:26:54.72:0,55,445	1/1:35,0:35:99:1276,100,0	1/1:24,1:26:56.64:564,57,0	0/1:29,0:28:98.75:99,0,383	1/1:24,2:28:68.99:1040,69,0	1/1:23,0:24:44.89:463,45,0	1/1:17,2:20:23.68:253,24,0	1/1:11,1:15:30.01:364,30,0	0/1:18,0:20:99:119,0,452	1/1:13,0:13:32.94:256,33,0	1/1:3,19:25:71.84:917,72,0	1/1:19,1:20:45.33:409,45,0	1/1:12,0:11:18:190,18,0	1/1:22,0:22:32.66:272,33,0	0/0:23,0:23:23.29:0,23,303	0/0:15,0:15:31.45:0,31,277	1/1:26,0:28:71.94:676,72,0	1/1:20,2:23:59.43:768,59,0	1/1:21,0:21:49.67:513,50,0	1/1:16,0:15:41.85:421,42,0
chr10	34215872	.	C	CTGTGTGTGTGTGTGTG	4003.39	PASS	AB=1.000;AC=14;AF=0.250;AN=56;BaseQRankSum=0.995;DP=481;FS=3.038;HRun=0;HaplotypeScore=167.5948;InbreedingCoeff=0.0156;MQ=47.84;MQ0=19;MQRankSum=-7.401;QD=28.39;ReadPosRankSum=4.046;VQSLOD=2.8513;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:40:5.22:0,5,33	0/1:6,0:6:39.74:202,0,40	0/0:34,0:20:47.80:0,48,1399	0/0:33,0:14:23.06:0,23,737	0/0:17,0:15:20.54:0,21,764	0/0:20,0:18:32.74:0,33,1143	0/0:20,0:18:24.04:0,24,850	0/1:19,0:17:80.85:285,0,81	0/0:21,0:21:38.35:0,38,1332	0/1:14,0:13:79.02:369,0,79	0/0:11,3:17:8.97:0,9,71	0/0:23,0:22:29.80:0,30,816	0/1:20,0:20:15.64:1113,0,16	0/0:16,0:15:5.56:0,6,48	0/0:23,0:23:5.44:0,5,48	0/1:12,0:12:48.99:192,0,49	0/0:21,0:20:41.86:0,42,1494	0/1:6,0:6:12.63:248,0,13	0/1:9,0:7:2.63:306,0,3	0/1:11,0:11:12.01:12,0,40	0/1:3,0:3:18.75:58,0,19	1/1:12,0:11:6:121,6,0	0/0:14,0:14:24.06:0,24,730	0/0:21,0:21:27.92:0,28,1147	0/0:13,0:12:3.88:0,4,26	1/1:13,0:13:10.78:908,11,0	0/1:16,0:16:58.97:189,0,59	0/0:6,0:4:11.87:0,12,82
chr10	34215874	.	C	CTGTGTGTGTGTGTGTGTG	9413.25	PASS	AB=0.901;AC=35;AF=0.625;AN=56;BaseQRankSum=0.687;DP=546;FS=0.000;HRun=0;HaplotypeScore=203.8246;InbreedingCoeff=0.5897;MQ=47.39;MQ0=19;MQRankSum=-8.656;QD=26.67;ReadPosRankSum=1.535;VQSLOD=3.8534;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:8,0:48:1.75:140,2,0	1/1:4,2:8:3.01:227,3,0	0/0:33,0:19:54:0,54,1675	0/0:30,0:14:25.78:0,26,830	0/0:18,0:16:20.80:0,21,874	0/0:21,0:19:31.86:0,32,1263	0/1:21,0:19:37.15:37,0,906	1/1:32,0:30:51.16:1612,51,0	0/0:19,0:19:41.34:0,41,1466	1/1:18,0:16:30.10:1180,30,0	0/0:18,0:17:1.25:0,1,3	0/1:22,0:21:15.10:15,0,674	1/1:9,7:27:30.03:1602,30,0	0/1:11,3:18:0:0,0,0	1/1:12,0:27:0.44:1,0,0	1/1:9,6:16:3.01:257,3,0	0/0:20,0:19:36.08:0,36,1574	1/1:6,0:7:9.03:527,9,0	1/1:12,0:9:18.06:814,18,0	1/1:14,0:14:3.01:43,3,0	1/1:3,1:6:3.01:99,3,0	1/1:15,0:14:6.02:170,6,0	0/0:15,0:15:21.54:0,22,684	0/0:19,0:19:19.06:0,19,996	1/1:9,5:18:2.90:16,3,0	1/1:15,0:15:39.11:1677,39,0	1/1:6,5:17:9.03:535,9,0	1/1:9,0:7:9.03:459,9,0
chr10	34216001	.	A	AT	8306.13	PASS	AB=0.846;AC=34;AF=0.607;AN=56;BaseQRankSum=-11.032;DP=571;FS=10.672;HRun=9;HaplotypeScore=59.3635;InbreedingCoeff=0.8636;MQ=74.50;MQ0=0;MQRankSum=-2.444;QD=24.08;ReadPosRankSum=-0.644;VQSLOD=4.9342;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:27:71.88:0,72,611	1/1:4,3:7:15.02:155,15,0	0/0:13,0:13:22.18:0,22,164	0/1:14,0:14:24.25:24,0,87	0/0:26,0:27:74.02:0,74,631	0/0:28,0:27:65.96:0,66,569	0/0:14,0:13:23.94:0,24,201	1/1:6,22:28:40.03:634,40,0	0/0:24,0:24:59.91:0,60,510	1/1:5,16:22:50.97:545,51,0	1/1:2,22:24:63.09:670,63,0	0/0:22,0:22:62.99:0,63,547	1/1:7,17:24:45.09:485,45,0	1/1:0,14:14:39.11:431,39,0	1/1:5,20:25:54.14:595,54,0	1/1:1,12:13:27.07:299,27,0	0/0:19,0:19:44.94:0,45,385	1/1:1,16:17:45.12:498,45,0	0/1:5,4:9:5.02:166,0,5	1/1:2,27:29:72.19:797,72,0	1/1:2,14:16:36.01:382,36,0	1/1:3,24:27:66.18:729,66,0	0/0:30,0:30:71.94:0,72,620	0/0:21,0:21:50.92:0,51,432	1/1:0,21:21:51.14:564,51,0	1/1:1,15:16:45.07:470,45,0	1/1:3,22:25:60.16:664,60,0	1/1:4,10:14:18.05:199,18,0
chr10	34216649	.	GTTTTT	G	7408.03	PASS	AB=0.622;AC=37;AF=0.661;AN=56;BaseQRankSum=3.516;DP=475;FS=22.394;HRun=15;HaplotypeScore=90.2577;InbreedingCoeff=0.8007;MQ=48.53;MQ0=27;MQRankSum=-8.947;QD=24.45;ReadPosRankSum=3.317;VQSLOD=1.9417;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,33:36:84.19:1351,84,0	1/1:0,3:3:6.02:97,6,0	0/0:14,0:3:2.90:0,3,16	0/0:13,0:4:2.05:0,2,66	0/0:5,0:13:27.09:0,27,476	0/0:4,0:16:39.13:0,39,675	0/1:9,1:23:12.15:12,0,510	1/1:17,10:24:23.13:297,23,0	0/0:8,0:24:48.16:0,48,827	1/1:7,8:8:20.52:252,21,0	1/1:4,13:12:12.01:193,12,0	0/0:8,0:21:42.10:0,42,720	1/1:3,11:14:33.07:531,33,0	1/1:3,16:19:36.12:579,36,0	1/1:3,17:19:45.15:724,45,0	1/1:3,14:17:33.08:531,33,0	0/0:10,0:24:51:0,51,844	1/1:3,7:11:11.97:193,12,0	1/1:6,7:9:20.98:312,21,0	1/1:0,10:6:8.95:145,9,0	1/1:3,5:7:5.44:139,5,0	1/1:2,6:7:15.05:240,15,0	0/0:5,0:17:21.01:0,21,360	0/0:8,0:23:51.14:0,51,927	1/1:2,5:8:8.43:105,8,0	1/1:2,18:17:48.12:772,48,0	1/1:2,16:19:40.90:596,41,0	1/1:1,9:8:21.07:338,21,0
chr10	34216903	.	C	CT	7685.93	PASS	AB=0.517;AC=33;AF=0.589;AN=56;BaseQRankSum=7.360;DP=607;FS=1.724;HRun=2;HaplotypeScore=86.7680;InbreedingCoeff=0.9265;MQ=60.41;MQ0=50;MQRankSum=-6.084;QD=23.72;ReadPosRankSum=-1.063;VQSLOD=4.3913;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:8:18.06:0,18,233	1/1:0,5:5:15.05:224,15,0	0/0:34,0:15:29.09:0,29,400	0/0:37,0:15:29.40:0,29,320	0/0:12,0:11:30.08:0,30,373	0/0:20,0:19:42.14:0,42,545	0/0:28,0:27:71.97:0,72,923	1/1:5,9:8:15.05:217,15,0	0/0:21,0:21:60.18:0,60,765	1/1:6,19:22:57.10:760,57,0	1/1:3,15:10:12:154,12,0	0/0:22,0:21:57.19:0,57,740	1/1:1,11:12:15.04:225,15,0	0/1:1,14:12:5.77:415,0,6	1/1:0,18:13:24.08:359,24,0	1/1:0,15:12:27.09:405,27,0	0/0:39,0:37:90.29:0,90,1164	1/1:3,14:13:21.07:315,21,0	1/1:3,11:9:18.06:270,18,0	1/1:7,22:25:61.27:799,61,0	1/1:4,29:22:39.09:552,39,0	1/1:3,16:17:23.86:358,24,0	0/0:18,0:18:36.59:0,37,464	0/0:40,0:36:96.30:0,96,1230	1/1:4,12:15:30.06:423,30,0	1/1:3,26:24:66.19:965,66,0	1/1:3,27:26:45.38:839,45,0	1/1:1,14:11:27.09:404,27,0
chr10	34216906	.	TCA	T	698.80	PASS	AB=0.987;AC=29;AF=0.518;AN=56;BaseQRankSum=6.540;DP=585;FS=15.360;HRun=0;HaplotypeScore=112.9632;InbreedingCoeff=0.6555;MQ=61.63;MQ0=48;MQRankSum=0.135;QD=2.44;ReadPosRankSum=-1.248;VQSLOD=1.2114;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:8:17.95:0,18,174	0/1:7,0:6:0.76:21,0,1	0/0:34,0:15:35:0,35,535	0/0:38,0:15:38.63:0,39,458	0/0:12,0:11:30.10:0,30,527	0/0:19,0:18:45.13:0,45,831	0/0:28,0:27:71.98:0,72,1353	1/1:10,0:5:3.95:20,4,0	0/0:21,0:21:60.21:0,60,1148	1/1:20,1:19:17.94:163,18,0	1/1:17,1:9:2.56:44,3,0	0/0:21,0:21:57.19:0,57,1065	1/1:11,1:12:4.53:25,5,0	0/1:16,0:13:13.60:44,0,14	0/0:18,0:13:3.99:0,4,21	1/1:16,0:13:10.57:48,11,0	0/0:39,0:37:96.29:0,96,1765	1/1:18,0:13:3.54:9,4,0	1/1:12,0:7:2.63:8,3,0	0/1:23,1:21:0.23:59,0,0	1/1:29,0:19:14.93:68,15,0	1/1:18,0:16:16.50:127,16,0	0/0:16,0:16:41.82:0,42,735	0/0:42,0:38:99:0,102,1837	1/1:13,0:12:0.22:41,0,0	1/1:27,0:22:32.83:114,33,0	1/1:30,1:28:14.42:94,14,0	1/1:14,0:10:1.76:5,2,0
chr10	34217831	.	CA	C	7674.53	PASS	AB=0.728;AC=36;AF=0.643;AN=56;BaseQRankSum=12.188;DP=563;FS=2.589;HRun=10;HaplotypeScore=58.7561;InbreedingCoeff=0.8692;MQ=63.17;MQ0=1;MQRankSum=1.211;QD=19.14;ReadPosRankSum=3.535;VQSLOD=5.7448;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:16:14.26:42,14,0	1/1:0,12:12:35.99:313,36,0	0/0:12,0:4:12.03:0,12,128	0/0:11,0:6:15.02:0,15,149	0/0:31,0:31:71.89:0,72,782	0/0:29,0:29:78.15:0,78,835	0/0:14,0:15:38.72:0,39,404	1/1:6,19:24:56.94:485,57,0	0/0:22,0:22:60.15:0,60,656	1/1:3,20:23:59.96:515,60,0	0/1:3,12:15:0.19:227,0,0	0/0:18,1:19:28.14:0,28,530	1/1:2,16:18:38.64:405,39,0	1/1:2,7:9:20.98:182,21,0	1/1:2,12:14:29.99:260,30,0	1/1:1,13:14:32.99:287,33,0	0/0:15,0:15:45.12:0,45,498	1/1:2,14:16:38.98:338,39,0	1/1:3,24:27:68.97:599,69,0	1/1:6,41:47:99:990,114,0	1/1:3,18:21:53.99:469,54,0	1/1:2,19:21:17.71:383,18,0	0/1:24,3:27:18.05:18,0,481	0/0:8,0:8:21.02:0,21,219	1/1:1,20:21:47.99:417,48,0	1/1:7,19:26:56.97:495,57,0	1/1:1,40:41:99:1042,120,0	1/1:0,8:8:24:208,24,0
chr10	34221019	.	TAAAGAAAAAA	T	5652.63	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-0.632;DP=445;FS=52.411;HRun=0;HaplotypeScore=130.3693;InbreedingCoeff=0.9793;MQ=74.02;MQ0=14;MQRankSum=-3.776;QD=25.81;ReadPosRankSum=1.454;VQSLOD=2.5115;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,20:21:15.05:421,15,0	1/1:4,0:4:8.99:109,9,0	0/0:48,0:18:44.57:0,45,1093	0/0:59,0:29:67.24:0,67,1674	0/0:12,0:11:33.10:0,33,1533	0/0:9,0:9:27.02:0,27,923	0/0:8,0:8:24.01:0,24,687	1/1:17,0:16:41.60:403,42,0	0/0:13,0:13:33.10:0,33,1430	1/1:13,0:12:32.94:442,33,0	1/1:18,0:18:44.73:385,45,0	0/0:17,0:17:48.14:0,48,2099	1/1:13,0:13:32.96:334,33,0	1/1:6,0:6:14.90:182,15,0	1/1:7,0:7:21.06:407,21,0	1/1:19,0:19:19.08:477,19,0	0/0:18,0:18:51.15:0,51,1943	1/1:11,0:11:26.93:288,27,0	1/1:11,0:10:29.94:251,30,0	1/1:13,0:13:23.71:298,24,0	1/1:11,0:11:26.14:214,26,0	1/1:9,0:8:14.81:107,15,0	0/0:18,0:17:42.08:0,42,1537	0/0:21,0:21:60.13:0,60,2428	1/1:11,0:10:21.43:259,21,0	1/1:10,0:10:29.48:312,29,0	1/1:16,0:16:41.81:432,42,0	1/1:8,1:9:18.03:332,18,0
chr10	34221033	.	GGAAAAAAAA	G	2461.20	PASS	AB=0.941;AC=27;AF=0.482;AN=56;BaseQRankSum=5.121;DP=459;FS=7.420;HRun=0;HaplotypeScore=114.4636;InbreedingCoeff=0.3006;MQ=68.51;MQ0=20;MQRankSum=-4.808;QD=12.37;ReadPosRankSum=0.906;VQSLOD=1.9552;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:22:40.71:198,0,41	1/1:5,0:5:5.95:74,6,0	0/0:72,0:20:50.85:0,51,1132	0/0:78,0:31:61.90:0,62,1684	0/0:12,0:11:5.66:0,6,1292	0/0:9,0:9:24.08:0,24,868	0/0:6,0:6:18.06:0,18,599	0/1:11,0:10:13.42:108,0,13	0/0:13,0:13:33.10:0,33,1200	1/1:15,0:14:0.24:267,0,0	1/1:14,1:15:4.61:79,5,0	0/0:19,0:19:51.17:0,51,2057	1/1:6,0:6:0.92:74,1,0	1/1:8,0:8:6.02:111,6,0	1/1:12,0:12:16.05:359,16,0	0/1:14,0:14:2.59:236,0,3	0/0:18,0:18:53.77:0,54,1784	1/1:4,4:7:8.98:167,9,0	0/1:9,0:6:13.12:13,0,13	0/1:7,2:8:3.06:154,0,3	0/1:8,1:9:9.53:44,0,10	1/1:9,0:8:3.41:19,3,0	0/0:15,0:14:42.13:0,42,1562	0/0:17,0:17:51.18:0,51,2159	0/1:14,0:12:7.90:101,0,8	0/1:13,0:13:9.99:208,0,10	1/1:14,0:14:15.71:194,16,0	0/1:4,2:6:2.06:232,0,2
chr10	34221042	.	A	AGG	2543.18	PASS	AB=0.841;AC=44;AF=0.786;AN=56;BaseQRankSum=-0.068;DP=466;FS=2.018;HRun=9;HaplotypeScore=83.0441;InbreedingCoeff=0.4416;MQ=74.27;MQ0=20;MQRankSum=-3.985;QD=7.61;ReadPosRankSum=-1.709;VQSLOD=-0.1545;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:15.03:0,15,154	1/1:5,0:6:5.69:47,6,0	0/0:79,0:25:44.84:0,45,410	0/1:77,0:29:4:4,0,197	1/1:6,3:12:3.01:44,3,0	1/1:3,4:11:15:175,15,0	1/1:6,1:9:9.96:106,10,0	1/1:6,1:8:5.69:59,6,0	1/1:4,4:14:15.03:178,15,0	1/1:8,2:10:17.85:181,18,0	1/1:15,1:17:7.06:61,7,0	0/1:14,1:17:46.83:47,0,303	1/1:2,5:7:11.57:118,12,0	1/1:6,0:7:8.20:65,8,0	1/1:11,1:14:24.43:201,24,0	1/1:8,1:10:16.55:126,17,0	1/1:5,10:19:27.71:382,28,0	0/1:5,1:6:3.48:45,0,3	1/1:6,4:7:9.03:122,9,0	1/1:4,1:8:0.08:76,0,0	1/1:3,6:13:11.83:184,12,0	1/1:8,0:8:2.97:36,3,0	0/0:16,0:15:33.06:0,33,342	0/0:17,0:17:48.12:0,48,511	1/1:15,0:14:5.44:24,5,0	1/1:10,1:11:20.41:238,20,0	1/1:8,2:11:16.90:151,17,0	0/1:4,1:6:32.23:42,0,32
chr10	34222245	.	G	GTATA	4442.75	PASS	AB=0.963;AC=45;AF=0.833;AN=54;BaseQRankSum=-3.932;DP=270;FS=0.952;HRun=0;HaplotypeScore=49.4779;InbreedingCoeff=0.2827;MQ=70.47;MQ0=2;MQRankSum=-1.673;QD=20.47;ReadPosRankSum=0.737;VQSLOD=4.0956;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:18:29.36:0,29,590	1/1:1,4:6:5.81:87,6,0	0/0:9,0:2:2.50:0,2,9	0/0:23,0:15:1.82:0,2,54	1/1:9,0:9:2.04:6,2,0	1/1:0,0:5:9.03:157,9,0	1/1:10,0:10:2.99:25,3,0	1/1:15,19:38:65.73:1159,66,0	0/1:7,0:8:11.73:91,0,12	1/1:6,4:11:9:122,9,0	1/1:3,0:3:3:25,3,0	1/1:6,0:6:3:27,3,0	1/1:3,5:9:9.03:222,9,0	1/1:2,3:5:6.02:150,6,0	./.	1/1:3,5:8:6.02:140,6,0	1/1:6,0:19:3.01:53,3,0	1/1:5,4:9:12.04:299,12,0	1/1:3,7:10:20.84:364,21,0	1/1:2,4:6:9.03:225,9,0	1/1:1,3:4:3.01:75,3,0	1/1:1,1:2:3.01:75,3,0	0/1:4,0:4:14.26:21,0,14	0/1:5,0:5:0:0,0,0	1/1:1,9:10:18.06:449,18,0	1/1:2,4:5:9.01:147,9,0	1/1:3,8:11:11.93:299,12,0	1/1:6,6:12:9.03:225,9,0
chr10	34224085	.	CAGTACTGTCATCGTGCTTATCCTG	C	1257.39	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.868;DP=862;FS=3.041;HRun=0;HaplotypeScore=497.5489;InbreedingCoeff=0.9976;MQ=59.70;MQ0=9;MQRankSum=-4.760;QD=29.24;ReadPosRankSum=1.083;VQSLOD=0.0077;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:15,28:38:24.01:1351,24,0	0/0:12,0:12:36.12:0,36,3481	0/0:31,0:14:42.14:0,42,1759	0/0:27,0:16:39.01:0,39,1830	0/0:20,0:20:60.21:0,60,6064	0/0:31,0:31:93.32:0,93,8736	0/0:35,0:35:99:0,105,10114	0/0:32,0:32:93.32:0,93,7031	0/0:43,0:43:99:0,126,12502	0/0:31,0:31:87.30:0,87,9323	0/0:20,0:20:57.18:0,57,4946	0/0:32,0:32:96.33:0,96,9604	0/0:37,0:37:99:0,111,10006	0/0:40,0:40:99:0,117,10766	0/0:53,0:53:99:0,157,15563	0/0:40,0:39:99:0,117,11961	0/0:30,0:30:90.31:0,90,8616	0/0:17,0:17:51.17:0,51,4906	0/0:15,0:13:36.10:0,36,2909	0/0:26,0:26:78.27:0,78,7871	0/0:65,0:65:99:0,196,17271	0/0:25,0:25:72.25:0,72,6467	0/0:17,0:17:48.16:0,48,4687	0/0:38,0:38:99:0,114,11629	0/0:25,0:25:75.25:0,75,7619	0/0:25,0:24:75.26:0,75,7516	0/0:32,0:31:93.30:0,93,7880	0/0:20,0:20:60.21:0,60,6471
chr10	34224601	.	CTT	C	2335.79	PASS	AB=0.713;AC=25;AF=0.446;AN=56;BaseQRankSum=5.757;DP=480;FS=0.885;HRun=15;HaplotypeScore=101.4642;InbreedingCoeff=0.7494;MQ=75.07;MQ0=1;MQRankSum=-0.395;QD=9.34;ReadPosRankSum=4.516;VQSLOD=2.1123;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,11:18:37.78:328,38,0	1/1:0,8:8:21:185,21,0	0/1:39,0:21:8.31:8,0,125	0/0:20,0:15:22.74:0,23,200	0/0:25,0:29:77.44:0,77,883	0/0:21,0:21:55.99:0,56,723	0/0:11,0:11:21.06:0,21,264	0/0:16,0:24:25.83:0,26,132	0/0:10,0:13:26.86:0,27,227	1/1:5,15:21:30.14:337,30,0	1/1:11,10:22:3.54:220,4,0	0/0:9,0:9:19.62:0,20,190	1/1:7,5:13:11.80:147,12,0	1/1:2,10:12:20.98:183,21,0	1/1:4,7:12:23.44:182,23,0	1/1:7,7:14:17.88:158,18,0	0/0:16,0:18:39.11:0,39,482	1/1:3,11:17:31.57:294,32,0	0/0:8,1:18:4.31:0,4,72	0/0:5,0:18:14.75:0,15,150	0/0:1,0:6:4.99:0,5,17	1/1:2,8:12:5.67:141,6,0	0/0:11,0:13:30.04:0,30,345	0/0:10,0:11:26.55:0,27,316	0/1:3,11:17:1.39:119,0,1	0/1:12,2:32:2.32:2,0,188	0/0:7,1:17:6.15:0,6,139	1/1:0,9:9:26.99:238,27,0
chr10	34224795	.	C	CG	12529.76	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-7.216;DP=510;FS=3.988;HRun=1;HaplotypeScore=50.8077;InbreedingCoeff=0.9975;MQ=76.72;MQ0=0;MQRankSum=-3.850;QD=40.42;ReadPosRankSum=-1.069;VQSLOD=4.8676;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,29:30:72.67:1053,73,0	1/1:0,6:6:18.06:270,18,0	0/0:16,0:16:40.94:0,41,501	0/0:13,0:13:29.98:0,30,389	0/0:29,0:29:84.27:0,84,1090	0/0:25,0:25:75.24:0,75,974	0/0:18,0:18:48.16:0,48,623	1/1:1,27:28:81.27:1210,81,0	0/0:18,0:18:54.18:0,54,699	1/1:0,10:10:27.07:381,27,0	1/1:1,11:12:33.11:494,33,0	0/0:20,0:20:60.20:0,60,779	1/1:1,13:14:39.13:583,39,0	1/1:0,16:16:48.16:718,48,0	1/1:2,16:18:42.10:602,42,0	1/1:1,9:10:27.09:397,27,0	0/0:32,0:32:96.31:0,96,1246	1/1:0,12:12:36.12:539,36,0	1/1:2,24:26:72.24:1078,72,0	1/1:0,29:29:81.27:1213,81,0	1/1:0,25:25:66.22:988,66,0	1/1:1,12:13:30.10:449,30,0	0/0:16,0:16:48.16:0,48,623	0/0:13,0:13:39.11:0,39,491	1/1:0,7:7:21.07:315,21,0	1/1:1,26:27:75.25:1121,75,0	1/1:0,18:18:48.16:715,48,0	1/1:0,9:9:27.09:404,27,0
chr10	34224935	.	A	AAAAAC	1219.21	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-1.103;DP=573;FS=8.833;HRun=0;HaplotypeScore=164.1610;InbreedingCoeff=0.8121;MQ=62.93;MQ0=3;MQRankSum=-4.242;QD=43.54;ReadPosRankSum=-1.002;VQSLOD=2.8713;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,16:28:48.16:1314,48,0	0/0:11,0:11:27.09:0,27,488	0/0:29,0:24:27.09:0,27,421	0/0:24,0:14:2.75:0,3,123	0/0:27,0:27:60.19:0,60,1084	0/0:18,0:18:45.15:0,45,837	0/0:21,0:21:45.14:0,45,796	0/0:29,0:29:42.14:0,42,748	0/0:11,0:11:21.05:0,21,351	0/0:22,0:22:54.18:0,54,987	0/0:22,0:21:42.13:0,42,727	0/0:17,0:17:42.12:0,42,713	0/0:19,0:19:39.12:0,39,673	0/0:17,0:17:24.08:0,24,446	0/0:20,0:20:30.10:0,30,549	0/0:13,0:13:27.09:0,27,502	0/0:32,0:32:78.24:0,78,1394	0/0:10,0:10:12.04:0,12,223	0/0:23,0:24:39.10:0,39,614	0/0:25,0:24:36.08:0,36,633	0/0:19,0:19:24.08:0,24,446	0/0:21,0:21:48.11:0,48,780	0/0:17,0:17:36.11:0,36,631	0/0:27,0:27:71.97:0,72,1265	0/0:17,0:17:30.10:0,30,558	0/0:20,0:20:39.13:0,39,725	0/0:21,0:21:45.15:0,45,819	0/0:11,0:10:21.07:0,21,390
chr10	34227070	.	TC	T	733.07	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.756;DP=526;FS=1.813;HRun=4;HaplotypeScore=46.3944;InbreedingCoeff=0.9075;MQ=61.35;MQ0=14;MQRankSum=0.242;QD=23.65;ReadPosRankSum=0.554;VQSLOD=2.5309;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,28:31:69.21:828,69,0	0/0:3,0:3:9.03:0,9,126	0/0:26,0:10:30.03:0,30,377	0/0:11,0:4:12.04:0,12,163	0/0:21,0:21:63.21:0,63,872	0/0:26,0:21:57.18:0,57,781	0/0:18,0:17:39.13:0,39,546	0/0:24,0:24:69.20:0,69,904	0/0:19,0:18:51.17:0,51,714	0/0:22,0:22:66.22:0,66,921	0/0:19,0:19:48.16:0,48,670	0/0:15,0:15:45.15:0,45,630	0/0:9,0:9:24.08:0,24,336	0/0:9,0:9:24.07:0,24,319	0/0:20,0:20:51.17:0,51,714	0/0:21,0:21:60.18:0,60,819	0/0:36,0:36:99:0,108,1490	0/0:17,0:17:51.11:0,51,671	0/0:21,0:20:57.17:0,57,766	0/0:16,0:16:42.13:0,42,569	0/0:19,0:19:54.07:0,54,692	0/0:11,0:11:33.11:0,33,459	0/0:22,0:22:66.21:0,66,903	0/0:28,0:28:78.25:0,78,1076	0/0:7,0:7:18.06:0,18,252	0/0:23,0:23:69.21:0,69,923	0/0:18,0:18:54.18:0,54,756	0/0:14,0:14:42.14:0,42,588
chr10	34227271	.	CATATATATAT	C	2241.12	PASS	AB=0.781;AC=32;AF=0.800;AN=40;BaseQRankSum=3.229;DP=131;FS=13.361;HRun=0;HaplotypeScore=44.5948;InbreedingCoeff=0.1679;MQ=52.46;MQ0=2;MQRankSum=-2.181;QD=22.41;ReadPosRankSum=2.891;VQSLOD=0.1908;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,0:6:6.02:140,6,0	0/1:1,1:2:38.60:85,0,39	./.	0/0:7,0:4:2.80:0,3,16	1/1:6,1:7:3.01:55,3,0	1/1:5,3:8:3.01:91,3,0	1/1:2,1:3:3.01:90,3,0	0/1:15,2:16:75.58:76,0,138	./.	1/1:2,0:3:3.01:70,3,0	1/1:2,2:5:9.03:251,9,0	./.	1/1:0,4:4:12.04:342,12,0	0/0:2,0:2:2.99:0,3,24	1/1:4,2:6:6.02:181,6,0	./.	1/1:5,5:11:9.03:251,9,0	1/1:3,1:3:3.01:90,3,0	1/1:3,1:4:5.23:98,5,0	0/0:6,0:6:3.01:0,3,45	./.	./.	./.	./.	1/1:4,0:4:3:25,3,0	1/1:4,0:6:6.01:59,6,0	1/1:4,1:5:6:113,6,0	1/1:1,3:5:12.04:341,12,0
chr10	34228062	.	T	TTTTA	4968.46	PASS	AC=46;AF=0.958;AN=48;DP=223;FS=0.000;HRun=0;HaplotypeScore=30.4979;InbreedingCoeff=0.0481;MQ=62.22;MQ0=3;QD=24.24;VQSLOD=3.8643;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,0:7:8.68:81,9,0	1/1:2,3:4:9.03:214,9,0	0/0:10,0:9:0:0,0,0	./.	1/1:6,1:7:3.01:71,3,0	1/1:3,4:7:9.03:214,9,0	./.	1/1:20,13:28:26.47:377,26,0	1/1:4,2:6:6.02:143,6,0	1/1:6,4:10:12.04:286,12,0	1/1:6,1:7:3.01:71,3,0	./.	1/1:5,0:5:3.01:69,3,0	1/1:2,5:7:9.03:214,9,0	./.	1/1:4,0:4:2.92:17,3,0	1/1:4,10:13:27.09:642,27,0	1/1:4,10:14:24.08:570,24,0	1/1:8,7:14:21.07:485,21,0	1/1:4,2:6:6.02:143,6,0	1/1:5,3:8:6.02:143,6,0	1/1:4,0:4:3.01:61,3,0	1/1:2,3:5:6.02:143,6,0	1/1:0,2:2:3.01:71,3,0	1/1:5,4:9:6.02:143,6,0	1/1:6,4:10:12.03:240,12,0	1/1:7,2:9:6.02:143,6,0	1/1:4,6:10:18.06:428,18,0
chr10	34228216	.	TC	T	62.47	PASS	AC=8;AF=0.667;AN=12;BaseQRankSum=-2.531;DP=61;FS=2.128;HRun=3;HaplotypeScore=28.9429;MQ=123.40;MQ0=10;MQRankSum=-1.920;QD=8.92;ReadPosRankSum=-1.746;VQSLOD=0.4396;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,0:2:3.01:35,3,0	./.	0/0:12,0:9:23.67:0,24,210	0/0:18,0:11:12.53:0,13,202	./.	./.	./.	./.	./.	./.	./.	./.	./.	1/1:1,1:1:3.01:37,3,0	./.	1/1:0,2:1:3.01:37,3,0	./.	./.	./.	./.	./.	./.	./.	./.	./.	1/1:0,1:1:3.01:37,3,0	./.	./.
chr10	34232946	.	T	TA	6215.69	PASS	AC=50;AF=0.926;AN=54;BaseQRankSum=-2.804;DP=216;FS=16.770;HRun=6;HaplotypeScore=19.2715;InbreedingCoeff=0.5400;MQ=58.71;MQ0=6;MQRankSum=-1.173;QD=30.47;ReadPosRankSum=2.054;VQSLOD=2.7490;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,10:10:21.07:264,21,0	1/1:0,4:4:11.95:130,12,0	0/0:5,0:2:6.01:0,6,61	0/0:4,0:1:3:0,3,29	1/1:0,10:10:27.09:340,27,0	1/1:1,14:15:39.12:491,39,0	1/1:0,4:3:9.03:113,9,0	1/1:0,11:10:27.09:340,27,0	1/1:0,3:3:9.03:113,9,0	1/1:1,15:16:42.13:527,42,0	1/1:1,8:9:24.07:290,24,0	1/1:0,4:4:12.04:151,12,0	1/1:2,9:10:21.07:264,21,0	1/1:0,2:2:3.01:38,3,0	1/1:1,4:5:12.04:151,12,0	1/1:0,5:4:12.04:151,12,0	1/1:2,8:9:24.08:302,24,0	1/1:1,7:7:21.07:264,21,0	1/1:0,4:4:12.04:151,12,0	1/1:1,10:11:30.10:375,30,0	1/1:0,9:9:27.09:340,27,0	1/1:1,1:1:3.01:38,3,0	1/1:1,5:5:5.67:75,6,0	./.	1/1:3,4:6:9.03:113,9,0	1/1:0,17:17:51.15:629,51,0	1/1:2,12:14:27.09:340,27,0	1/1:0,7:7:18.06:226,18,0
chr10	34233204	.	TTCCTC	T	13806.99	PASS	AB=0.518;AC=33;AF=0.589;AN=56;BaseQRankSum=14.671;DP=612;FS=6.518;HRun=0;HaplotypeScore=124.6094;InbreedingCoeff=0.8859;MQ=77.61;MQ0=0;MQRankSum=-7.327;QD=40.61;ReadPosRankSum=2.617;VQSLOD=4.8070;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,138,3997	1/1:0,7:7:15.01:264,15,0	0/0:16,0:17:41.01:0,41,1143	0/0:34,0:31:81.56:0,82,2038	0/0:15,0:14:33.11:0,33,885	0/0:17,0:17:51.17:0,51,1496	0/0:21,0:21:54.19:0,54,1526	1/1:8,14:22:39.13:735,39,0	0/0:27,0:27:78.22:0,78,2182	1/1:4,27:30:75.17:1325,75,0	1/1:2,4:6:5.98:81,6,0	0/0:26,0:26:78.27:0,78,2344	1/1:3,26:29:66.23:1339,66,0	0/1:2,27:29:12.58:1420,0,13	1/1:3,22:25:54.19:1096,54,0	1/1:0,16:16:45.15:914,45,0	0/0:21,0:20:60.21:0,60,1765	1/1:2,10:12:7.24:525,7,0	1/1:6,14:20:39.09:679,39,0	1/1:2,8:10:18.02:324,18,0	1/1:4,34:38:48.16:975,48,0	1/1:3,8:11:29.97:479,30,0	0/0:19,0:19:42.14:0,42,1245	0/0:24,0:24:66.23:0,66,1988	1/1:2,15:16:36.12:731,36,0	1/1:7,25:32:75.21:1459,75,0	1/1:1,30:30:66.23:1340,66,0	1/1:0,4:4:6.02:122,6,0
chr10	34233566	.	GAA	G	666.88	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=10.983;DP=663;FS=10.746;HRun=13;HaplotypeScore=129.9594;InbreedingCoeff=0.7213;MQ=70.74;MQ0=0;MQRankSum=1.781;QD=18.02;ReadPosRankSum=2.922;VQSLOD=1.4951;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,30:37:81.03:761,81,0	0/0:9,0:12:5.63:0,6,171	0/0:13,0:14:11.25:0,11,130	0/0:19,0:19:2.17:0,2,90	0/0:35,0:35:85.95:0,86,841	0/0:28,0:28:68.70:0,69,658	0/0:12,0:13:22.49:0,22,248	0/0:34,0:35:61.90:0,62,652	0/0:20,1:22:23.01:0,23,451	0/0:31,0:32:38.81:0,39,562	0/0:20,0:21:49.54:0,50,526	0/0:35,0:36:78.37:0,78,791	0/0:18,0:18:51.08:0,51,519	0/0:16,0:18:29.08:0,29,357	0/0:22,0:24:35.66:0,36,435	0/0:23,0:23:65.87:0,66,614	0/0:18,0:19:46.53:0,47,489	0/0:12,0:12:27.05:0,27,268	0/0:18,0:18:32.63:0,33,433	0/0:31,0:33:63.48:0,63,644	0/0:22,0:22:47.82:0,48,420	0/0:33,0:35:70.05:0,70,675	0/0:28,0:28:65.91:0,66,601	0/0:19,0:20:54.03:0,54,546	0/0:13,0:14:20.71:0,21,242	0/0:31,0:33:42.83:0,43,593	0/0:26,0:28:57.73:0,58,660	0/0:9,0:11:14.22:0,14,202
chr10	34233579	.	A	AC	5691.67	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-0.998;DP=655;FS=75.699;HRun=1;HaplotypeScore=105.8786;InbreedingCoeff=0.8531;MQ=62.76;MQ0=1;MQRankSum=3.214;QD=9.03;ReadPosRankSum=0.863;VQSLOD=0.3588;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:31,0:31:78.94:474,79,0	1/1:11,0:11:12.20:105,12,0	0/0:11,0:9:16.92:0,17,116	0/0:14,0:11:17.80:0,18,130	1/1:35,1:36:17.88:165,18,0	1/1:29,1:30:49.53:334,50,0	1/1:15,1:16:34.72:228,35,0	1/1:34,1:35:42.03:383,42,0	1/1:26,0:25:35.41:237,35,0	1/1:33,1:34:71.71:454,72,0	1/1:19,3:22:23.64:242,24,0	1/1:35,0:35:40.21:282,40,0	1/1:22,1:23:4.11:141,4,0	1/1:16,0:16:26.28:146,26,0	1/1:22,0:22:38.81:199,39,0	1/1:22,2:24:31.83:237,32,0	1/1:22,0:22:26.31:115,26,0	1/1:10,1:11:16.56:110,17,0	1/1:28,0:25:22.30:251,22,0	1/1:27,1:28:9.45:153,9,0	1/1:20,0:20:41.04:215,41,0	1/1:34,0:34:47.66:322,48,0	1/1:26,0:26:48.70:231,49,0	1/1:21,0:21:25.72:76,26,0	1/1:11,0:11:15.01:64,15,0	1/1:26,2:28:28.26:286,28,0	1/1:31,0:31:24.71:158,25,0	1/1:8,1:9:13.14:81,13,0
chr10	34235193	.	ATTTC	A	660.01	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.467;DP=575;FS=9.999;HRun=0;HaplotypeScore=91.0001;InbreedingCoeff=0.9816;MQ=71.41;MQ0=4;MQRankSum=-0.249;QD=34.74;ReadPosRankSum=2.106;VQSLOD=3.1839;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,18:19:42.14:755,42,0	0/0:5,0:5:15.05:0,15,390	0/0:25,0:22:41.29:0,41,767	0/0:11,0:11:33.11:0,33,753	0/0:32,0:32:93.31:0,93,2351	0/0:26,0:26:72.25:0,72,1859	0/0:12,0:12:33.11:0,33,854	0/0:34,0:33:81.28:0,81,2096	0/0:13,0:13:33.11:0,33,824	0/0:21,0:21:54.19:0,54,1404	0/0:15,0:15:42.14:0,42,1072	0/0:21,0:21:63.20:0,63,1562	0/0:15,0:15:45.15:0,45,1169	0/0:20,0:20:54.17:0,54,1287	0/0:18,0:18:51.17:0,51,1262	0/0:15,0:15:42.14:0,42,1091	0/0:24,0:24:66.18:0,66,1602	0/0:27,0:27:72.22:0,72,1780	0/0:23,0:21:54.18:0,54,1273	0/0:32,0:32:81.28:0,81,2076	0/0:19,0:19:45.15:0,45,1126	0/0:18,0:18:51.16:0,51,1251	0/0:26,0:26:69.24:0,69,1783	0/0:8,0:8:24.08:0,24,624	0/0:15,0:15:45.15:0,45,1170	0/0:24,0:24:57.19:0,57,1465	0/0:31,0:31:84.29:0,84,2147	0/0:26,0:26:66.65:0,67,1472
chr10	34235909	.	C	CAAACAAAACAAAACA	6974.54	PASS	AB=0.889;AC=11;AF=0.196;AN=56;BaseQRankSum=0.587;DP=611;FS=1.296;HRun=0;HaplotypeScore=237.3812;InbreedingCoeff=0.8195;MQ=64.54;MQ0=1;MQRankSum=-8.511;QD=52.44;ReadPosRankSum=-3.507;VQSLOD=3.5403;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:20.78:0,21,544	0/0:8,0:8:12.04:0,12,495	0/0:31,0:16:15.03:0,15,222	0/0:42,0:28:7.56:0,8,60	1/1:30,5:36:45.11:2052,45,0	1/1:13,6:21:24.08:1667,24,0	1/1:15,0:16:18.06:1003,18,0	0/0:29,0:28:21.06:0,21,640	1/1:13,5:21:18.06:1163,18,0	0/0:36,0:35:78.26:0,78,3039	0/0:24,0:24:42.11:0,42,1369	0/0:20,0:20:45.11:0,45,1385	0/0:12,0:12:24.07:0,24,893	0/0:22,0:22:33.11:0,33,1170	0/0:19,0:19:42.14:0,42,1645	0/0:14,0:14:24.08:0,24,827	1/1:11,2:15:18.06:1078,18,0	0/0:16,0:15:33:0,33,1050	0/0:17,0:17:2.07:0,2,242	0/0:29,0:29:57.16:0,57,1925	0/0:10,0:10:21.05:0,21,710	0/0:19,0:19:42.14:0,42,1490	0/0:25,0:25:51.16:0,51,1636	0/0:15,0:15:27.07:0,27,908	0/0:25,0:25:36.12:0,36,1416	0/1:21,0:24:12.64:13,0,899	0/0:34,0:34:72.21:0,72,2426	0/0:13,0:13:36.07:0,36,1189
chr10	34235946	.	TAAA	T	72.82	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.986;DP=629;FS=1.623;HRun=4;HaplotypeScore=100.8549;InbreedingCoeff=0.8908;MQ=62.48;MQ0=3;MQRankSum=-3.833;QD=9.10;ReadPosRankSum=-0.162;VQSLOD=-0.3756;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,5:8:6.37:153,6,0	0/0:9,0:9:27.09:0,27,599	0/0:25,0:16:41.79:0,42,730	0/0:34,0:19:53.86:0,54,917	0/0:32,0:32:90.30:0,90,2042	0/0:20,0:20:54.19:0,54,1210	0/0:17,0:17:51.18:0,51,1160	0/0:34,0:34:99:0,99,2227	0/0:14,0:14:36.09:0,36,789	0/0:31,0:31:93.31:0,93,2156	0/0:21,0:21:63.22:0,63,1489	0/0:19,0:19:57.20:0,57,1327	0/0:19,0:19:54.18:0,54,1225	0/0:22,0:22:66.22:0,66,1515	0/0:20,0:20:60.21:0,60,1420	0/0:20,0:20:60.21:0,60,1361	0/0:12,0:12:27.09:0,27,584	0/0:17,0:17:51.09:0,51,1086	0/0:18,0:17:42.14:0,42,950	0/0:47,0:47:99:0,135,3103	0/0:14,0:14:36.12:0,36,829	0/0:26,0:26:78.25:0,78,1759	0/0:26,0:26:78.24:0,78,1735	0/0:14,0:14:39.13:0,39,919	0/0:24,0:24:69.24:0,69,1578	0/0:24,0:24:69.23:0,69,1583	0/0:38,0:38:99:0,111,2551	0/0:24,0:24:63.19:0,63,1328
chr10	34236090	.	AG	A	323.50	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.814;DP=506;FS=4.084;HRun=2;HaplotypeScore=72.0932;InbreedingCoeff=0.9769;MQ=64.56;MQ0=4;MQRankSum=-3.362;QD=26.96;ReadPosRankSum=-0.264;VQSLOD=3.1874;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:1,11:12:36.11:418,36,0	0/0:7,0:7:21.07:0,21,315	0/0:17,0:13:33.54:0,34,413	0/0:15,0:13:32.96:0,33,451	0/0:19,0:19:54.18:0,54,808	0/0:20,0:20:57.19:0,57,854	0/0:15,0:15:39.13:0,39,583	0/0:29,0:29:75.25:0,75,1107	0/0:21,0:21:57.18:0,57,835	0/0:20,0:20:57.19:0,57,855	0/0:18,0:18:54.17:0,54,791	0/0:20,0:20:60.20:0,60,897	0/0:18,0:18:54.16:0,54,784	0/0:21,0:21:60.18:0,60,876	0/0:21,0:21:60.20:0,60,899	0/0:22,0:22:60.19:0,60,879	0/0:17,0:17:51.15:0,51,740	0/0:8,0:8:24.04:0,24,326	0/0:9,0:9:27.08:0,27,387	0/0:32,0:32:90.28:0,90,1306	0/0:18,0:18:54.18:0,54,809	0/0:15,0:15:45.15:0,45,673	0/0:23,0:23:66.22:0,66,985	0/0:13,0:13:36.12:0,36,539	0/0:16,0:16:45.15:0,45,674	0/0:21,0:21:54.17:0,54,791	0/0:34,0:33:93.30:0,93,1371	0/0:5,0:5:15.05:0,15,225
chr10	34236134	.	TAA	T	7428.19	PASS	AB=0.673;AC=41;AF=0.732;AN=56;BaseQRankSum=-11.275;DP=506;FS=2.308;HRun=12;HaplotypeScore=82.3941;InbreedingCoeff=0.4952;MQ=71.19;MQ0=0;MQRankSum=-0.320;QD=16.73;ReadPosRankSum=1.771;VQSLOD=4.1871;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,13:17:33.06:335,33,0	1/1:3,5:8:15.02:153,15,0	0/1:17,1:21:5.56:6,0,148	0/1:12,0:12:3.21:3,0,180	0/1:8,1:17:6.06:6,0,92	0/1:2,2:22:15.09:15,0,95	0/1:3,1:16:0.06:0,0,66	1/1:5,21:28:56.54:613,57,0	0/1:5,2:27:3.58:4,0,161	1/1:6,14:20:42.06:427,42,0	1/1:3,11:14:27:275,27,0	0/0:4,0:21:39.93:0,40,140	1/1:1,18:19:54.12:549,54,0	1/1:3,18:21:45.07:458,45,0	1/1:2,13:15:36.07:366,36,0	1/1:3,22:25:60.13:610,60,0	0/0:6,1:22:12.89:0,13,121	1/1:0,12:12:36.08:366,36,0	1/1:1,5:6:15.03:153,15,0	1/1:3,25:31:56.28:665,56,0	1/1:0,17:20:41.30:513,41,0	1/1:2,11:15:29.53:339,30,0	0/0:4,0:16:27.45:0,27,97	0/1:2,1:10:7.05:7,0,62	1/1:2,13:15:36.06:366,36,0	1/1:1,18:19:48.07:488,48,0	1/1:6,27:34:71.83:713,72,0	0/0:3,0:3:0:0,0,0
chr10	34237421	.	TGGGGAGGTGGAG	T	2461.12	PASS	AC=28;AF=0.583;AN=48;BaseQRankSum=4.914;DP=255;FS=13.895;HRun=0;HaplotypeScore=59.3592;InbreedingCoeff=0.6647;MQ=38.96;MQ0=45;MQRankSum=-5.964;QD=23.22;ReadPosRankSum=1.699;VQSLOD=0.4313;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,4:21:33.10:0,33,1113	1/1:0,1:1:3.01:111,3,0	0/0:6,0:1:2.99:0,3,23	./.	0/0:14,0:14:27.09:0,27,1204	./.	0/0:17,0:14:14.98:0,15,651	1/1:4,0:2:5.97:46,6,0	0/0:11,0:10:9.03:0,9,428	1/1:8,2:7:12.04:344,12,0	1/1:0,4:3:3.01:107,3,0	0/0:9,0:6:9.03:0,9,367	1/1:2,3:5:6.02:224,6,0	0/0:4,0:4:2.99:0,3,24	./.	1/1:5,1:3:3.01:31,3,0	0/0:20,0:18:30.08:0,30,1302	1/1:1,7:8:6.02:189,6,0	1/1:1,7:7:21.03:559,21,0	1/1:1,3:2:6.02:187,6,0	1/1:31,2:23:6.45:50,6,0	1/1:3,4:4:9.03:325,9,0	0/0:9,0:6:8.99:0,9,381	0/0:16,3:18:18.04:0,18,809	1/1:0,6:5:3.01:109,3,0	1/1:2,6:5:9.03:336,9,0	1/1:2,0:2:2.92:17,3,0	./.
chr10	34237573	.	CAGGGGAGATTATGGTGGG	C	220.06	PASS	AB=1.000;AC=9;AF=0.375;AN=24;BaseQRankSum=1.686;DP=203;FS=25.836;HRun=0;HaplotypeScore=37.9753;InbreedingCoeff=0.3293;MQ=24.85;MQ0=79;MQRankSum=-1.241;QD=7.86;ReadPosRankSum=0.859;VQSLOD=-0.0279;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:15,7:13:3.01:0,3,256	./.	./.	./.	0/0:10,0:6:3.01:0,3,65	0/0:6,0:3:6.02:0,6,268	0/0:10,0:6:3.01:0,3,100	./.	0/0:11,0:8:2.56:0,3,256	./.	./.	0/1:9,0:8:44.82:45,0,406	./.	1/1:5,0:3:5.60:118,6,0	./.	1/1:0,0:1:3.01:111,3,0	0/0:18,0:14:15.05:0,15,991	./.	./.	./.	1/1:9,0:4:2.97:20,3,0	./.	./.	0/0:12,0:12:15.05:0,15,978	./.	./.	1/1:4,0:3:3:27,3,0	./.
chr10	34238240	.	AAAAT	A	10925.38	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=12.318;DP=427;FS=0.879;HRun=0;HaplotypeScore=80.7748;InbreedingCoeff=0.9708;MQ=58.93;MQ0=1;MQRankSum=-4.964;QD=39.02;ReadPosRankSum=0.777;VQSLOD=4.6520;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:6:18.06:0,18,454	1/1:0,10:10:21.07:375,21,0	0/0:6,0:4:5.93:0,6,93	0/0:8,0:6:9.03:0,9,173	0/0:30,0:30:87.29:0,87,2085	0/0:16,0:16:39.12:0,39,896	0/0:11,0:11:33.10:0,33,785	1/1:3,12:14:36.10:550,36,0	0/0:9,0:8:18.06:0,18,455	1/1:3,27:28:75.23:1282,75,0	1/1:1,17:18:51.13:853,51,0	0/0:15,0:15:30.10:0,30,724	1/1:1,15:16:30.07:503,30,0	1/1:0,18:17:36.12:642,36,0	1/1:1,16:17:24.08:428,24,0	1/1:0,18:17:30.10:513,30,0	0/0:19,0:19:45.15:0,45,1123	1/1:0,12:10:18.06:321,18,0	1/1:0,15:12:36.09:542,36,0	1/1:0,15:13:33.11:588,33,0	1/1:2,9:11:23.90:356,24,0	1/1:0,13:13:39.04:604,39,0	0/0:17,0:17:48.15:0,48,1098	0/0:10,0:10:27.09:0,27,560	1/1:3,11:13:36.07:581,36,0	1/1:0,19:19:57.18:968,57,0	1/1:0,30:30:78.27:1390,78,0	1/1:0,9:9:24.08:429,24,0
chr10	34238903	.	A	AC	10083.52	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=14.312;DP=491;FS=1.568;HRun=0;HaplotypeScore=70.9066;InbreedingCoeff=0.9653;MQ=70.78;MQ0=1;MQRankSum=-2.475;QD=35.01;ReadPosRankSum=2.803;VQSLOD=4.6725;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:2.19:0,2,83	1/1:0,7:7:18.04:242,18,0	0/0:24,0:20:47.31:0,47,668	0/0:15,0:12:12.41:0,12,309	0/0:30,0:30:90.28:0,90,1217	0/0:27,0:27:81.25:0,81,1100	0/0:12,0:12:33.06:0,33,403	1/1:1,33:34:98.84:1237,99,0	0/0:14,0:14:42.13:0,42,571	1/1:0,14:14:42.10:531,42,0	1/1:2,12:14:39.58:502,40,0	0/0:16,0:16:48.13:0,48,633	1/1:0,15:15:27.09:355,27,0	1/1:0,8:8:21.07:277,21,0	1/1:1,13:14:42.10:540,42,0	1/1:0,17:17:48.05:635,48,0	0/0:14,0:14:39.13:0,39,537	1/1:4,14:15:39.60:512,40,0	1/1:1,11:11:33.09:427,33,0	1/1:1,31:32:93.24:1201,93,0	1/1:0,13:13:30.10:393,30,0	1/1:1,14:15:42.02:523,42,0	0/0:23,0:23:69.22:0,69,949	0/0:10,0:10:30.10:0,30,415	1/1:0,15:15:45.15:598,45,0	1/1:3,17:20:54.64:710,55,0	1/1:1,24:25:72.15:942,72,0	1/1:4,11:15:35.11:459,35,0
chr10	34238904	.	A	AC	10937.46	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=14.631;DP=488;FS=2.060;HRun=3;HaplotypeScore=67.8177;InbreedingCoeff=0.9975;MQ=70.80;MQ0=1;MQRankSum=-2.006;QD=36.10;ReadPosRankSum=2.287;VQSLOD=5.6109;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,16:18:42.14:576,42,0	1/1:7,0:7:18.06:244,18,0	0/0:24,0:20:47.05:0,47,572	0/0:15,0:12:26.04:0,26,304	0/0:30,0:30:87.23:0,87,1009	0/0:27,0:27:81.16:0,81,931	0/0:12,0:12:36.05:0,36,385	1/1:33,0:33:96.74:1242,97,0	0/0:14,0:14:42.11:0,42,491	1/1:14,0:14:42.10:549,42,0	1/1:13,0:13:36.12:490,36,0	0/0:16,0:16:39.10:0,39,447	1/1:14,0:14:27.09:368,27,0	1/1:8,0:8:21.07:286,21,0	1/1:14,0:14:42.11:550,42,0	1/1:17,0:17:48.05:650,48,0	0/0:14,0:14:36.11:0,36,430	1/1:18,0:15:39.13:531,39,0	1/1:11,0:11:33.08:423,33,0	1/1:32,0:32:96.26:1267,96,0	1/1:13,0:13:30.10:408,30,0	1/1:15,0:15:42.08:539,42,0	0/0:23,0:23:69.20:0,69,817	0/0:10,0:10:27.08:0,27,323	1/1:15,0:15:45.15:606,45,0	1/1:20,0:20:57.18:758,57,0	1/1:25,0:25:72.15:975,72,0	1/1:15,0:15:36.11:477,36,0
chr10	34241914	.	G	GT	548.03	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-3.954;DP=458;FS=2.988;HRun=8;HaplotypeScore=44.0460;InbreedingCoeff=0.9651;MQ=73.60;MQ0=0;MQRankSum=-0.378;QD=28.84;ReadPosRankSum=-0.302;VQSLOD=3.6785;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,19:19:57.13:643,57,0	0/0:11,0:11:21.01:0,21,192	0/0:6,0:6:15.01:0,15,137	0/0:9,0:9:20.88:0,21,176	0/0:29,0:29:59.25:0,59,684	0/0:22,0:22:60.02:0,60,549	0/0:10,0:10:27.01:0,27,247	0/0:32,0:32:84.04:0,84,769	0/0:12,0:12:24:0,24,219	0/0:15,0:15:45:0,45,405	0/0:15,0:15:39.02:0,39,357	0/0:14,0:14:39.01:0,39,352	0/0:12,0:12:32.97:0,33,288	0/0:14,0:14:35.97:0,36,321	0/0:14,0:14:41.97:0,42,366	0/0:18,0:18:42.01:0,42,384	0/0:16,0:16:39:0,39,357	0/0:9,0:9:21.01:0,21,192	0/0:17,0:17:45.01:0,45,408	0/0:23,0:23:66.01:0,66,596	0/0:9,0:9:27.01:0,27,247	0/0:11,0:11:26.98:0,27,239	0/0:21,0:21:60.03:0,60,549	0/0:9,0:9:24.01:0,24,219	0/0:21,0:21:57.02:0,57,522	0/0:19,0:19:48.01:0,48,439	0/0:27,0:26:78.04:0,78,714	0/0:24,0:23:65.94:0,66,596
chr10	34246753	.	CT	C	6725.01	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=11.752;DP=533;FS=3.230;HRun=9;HaplotypeScore=49.3949;InbreedingCoeff=0.9604;MQ=61.95;MQ0=13;MQRankSum=-3.036;QD=19.66;ReadPosRankSum=3.091;VQSLOD=5.2466;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,17:20:42.01:384,42,0	1/1:0,8:6:15.01:137,15,0	0/0:12,0:11:15.51:0,16,160	0/0:10,0:7:8.34:0,8,79	0/0:36,0:36:99:0,102,1177	0/0:24,0:23:63.18:0,63,719	0/0:13,0:13:33.10:0,33,381	1/1:9,6:12:5.93:47,6,0	0/0:13,0:13:36.08:0,36,394	1/1:2,30:24:62.99:569,63,0	1/1:5,21:24:51.02:467,51,0	0/0:29,0:29:81.20:0,81,920	1/1:3,11:14:33.01:302,33,0	1/1:0,17:13:33.02:302,33,0	1/1:4,21:23:51.02:467,51,0	1/1:0,14:11:33.02:302,33,0	0/0:19,0:19:57.16:0,57,649	1/1:1,13:14:38.99:349,39,0	1/1:2,14:12:27.01:247,27,0	1/1:0,24:21:63.03:576,63,0	1/1:2,9:11:27.01:247,27,0	1/1:2,20:21:57.02:522,57,0	0/0:24,0:24:72.20:0,72,821	0/0:11,0:11:24.07:0,24,277	1/1:1,18:17:48.02:439,48,0	1/1:3,18:21:54.01:488,54,0	1/1:2,37:33:87.04:796,87,0	1/1:0,3:3:9:82,9,0
chr10	34248403	.	C	CG	14530.47	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=1.309;DP=772;FS=3.247;HRun=4;HaplotypeScore=92.4407;InbreedingCoeff=0.9987;MQ=59.95;MQ0=16;MQRankSum=1.007;QD=32.43;ReadPosRankSum=-0.456;VQSLOD=4.8836;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,147,1642	1/1:0,6:6:18.06:245,18,0	0/0:18,0:13:30.08:0,30,340	0/0:22,0:18:36.06:0,36,381	0/0:38,0:38:99:0,105,1161	0/0:25,0:25:63.18:0,63,713	0/0:29,0:29:75.17:0,75,834	1/1:5,24:29:35.23:841,35,0	0/0:24,0:24:60.14:0,60,660	1/1:5,32:37:75.93:1230,76,0	1/1:1,24:25:63.21:860,63,0	0/0:34,0:34:84.24:0,84,951	1/1:3,18:19:48.16:655,48,0	1/1:7,26:29:44.39:983,44,0	1/1:6,29:32:78.26:1058,78,0	1/1:8,23:26:66.22:902,66,0	0/0:25,0:25:69.07:0,69,748	1/1:4,22:25:63.21:860,63,0	1/1:4,16:18:48.11:614,48,0	1/1:1,20:21:51.17:694,51,0	1/1:5,31:36:84.28:1147,84,0	1/1:1,29:30:78.26:1065,78,0	0/0:25,0:25:69.14:0,69,759	0/0:31,0:31:87.21:0,87,972	1/1:3,22:25:63.21:854,63,0	1/1:5,27:30:50.23:1010,50,0	1/1:1,27:27:75.25:1021,75,0	1/1:0,13:13:36.12:492,36,0
chr10	34248701	.	T	TA	19868.47	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-2.766;DP=730;FS=3.648;HRun=1;HaplotypeScore=80.7420;InbreedingCoeff=0.9993;MQ=84.46;MQ0=1;MQRankSum=-5.853;QD=43.67;ReadPosRankSum=2.861;VQSLOD=4.9221;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,62:62:99:2782,175,0	1/1:0,12:12:30.10:479,30,0	0/0:35,0:35:96.31:0,96,1296	0/0:23,0:23:66.22:0,66,902	0/0:32,0:32:90.30:0,90,1258	0/0:19,0:19:57.19:0,57,797	0/0:24,0:24:69.16:0,69,946	1/1:1,34:34:99:1624,102,0	0/0:39,0:39:99:0,117,1635	1/1:0,30:30:84.29:1340,84,0	1/1:0,12:12:36.12:575,36,0	0/0:28,0:28:78.26:0,78,1089	1/1:0,19:19:48.16:767,48,0	1/1:1,17:18:48.16:767,48,0	1/1:1,31:32:84.29:1343,84,0	1/1:0,27:27:75.26:1199,75,0	0/0:27,0:27:81.27:0,81,1132	1/1:2,18:20:54.18:863,54,0	1/1:3,25:26:69.16:1029,69,0	1/1:0,20:20:57.19:911,57,0	1/1:0,36:36:96.33:1535,96,0	1/1:0,20:20:54.18:863,54,0	0/0:13,0:13:39.13:0,39,545	0/0:35,0:35:99:0,102,1426	1/1:0,20:20:60.20:959,60,0	1/1:0,31:31:93.32:1488,93,0	1/1:1,24:25:63.21:1007,63,0	1/1:1,7:8:21.07:336,21,0
chr10	34249233	.	A	AT	8669.01	PASS	AB=1.000;AC=37;AF=0.661;AN=56;BaseQRankSum=-11.789;DP=520;FS=1.590;HRun=9;HaplotypeScore=48.7880;InbreedingCoeff=0.8453;MQ=68.53;MQ0=0;MQRankSum=0.404;QD=25.35;ReadPosRankSum=-1.246;VQSLOD=5.0312;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,18:19:45.10:487,45,0	1/1:2,16:19:24.93:486,25,0	0/1:8,0:8:15.49:15,0,87	0/0:4,0:4:3:0,3,26	0/0:25,0:25:68.96:0,69,595	0/0:21,0:21:56.98:0,57,492	0/0:22,0:22:53.98:0,54,469	1/1:7,23:30:26.62:686,27,0	0/0:9,0:9:14.98:0,15,126	1/1:1,20:21:33.63:562,34,0	1/1:3,16:19:42.07:451,42,0	0/0:20,0:20:50.86:0,51,427	1/1:3,13:16:29.87:332,30,0	1/1:2,12:14:36.10:398,36,0	1/1:3,16:19:13.01:359,13,0	1/1:0,16:16:42.11:465,42,0	0/0:32,1:35:63.87:0,64,752	1/1:2,9:11:24.06:265,24,0	1/1:3,8:11:1.06:240,1,0	1/1:2,20:22:63.17:693,63,0	1/1:4,11:15:10.04:339,10,0	1/1:2,18:20:60.05:634,60,0	0/0:24,0:24:62.97:0,63,544	0/0:17,0:18:50.02:0,50,423	1/1:0,19:19:51.14:564,51,0	1/1:7,17:24:51.14:564,51,0	1/1:2,31:33:87.24:962,87,0	1/1:1,5:6:15.04:166,15,0
chr10	34251864	.	GGT	G	5372.96	PASS	AC=10;AF=0.185;AN=54;BaseQRankSum=4.908;DP=807;FS=1.576;HRun=0;HaplotypeScore=111.4738;InbreedingCoeff=1.0000;MQ=69.19;MQ0=1;MQRankSum=1.452;QD=38.11;ReadPosRankSum=2.562;VQSLOD=7.0690;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,126,2309	0/0:13,0:13:39.13:0,39,699	0/0:26,0:25:65.78:0,66,1100	0/0:25,0:25:75.26:0,75,1354	1/1:0,24:24:69.23:988,69,0	1/1:2,18:20:51.17:731,51,0	1/1:0,25:25:66.22:946,66,0	0/0:50,0:50:99:0,138,2498	1/1:1,29:30:78.26:1118,78,0	0/0:31,0:31:90.31:0,90,1646	0/0:17,0:17:36.12:0,36,651	0/0:36,0:36:99:0,108,1970	0/0:31,0:31:93.32:0,93,1698	0/0:39,0:39:99:0,111,2002	0/0:40,0:40:99:0,114,2088	0/0:40,0:40:99:0,114,2089	1/1:0,42:41:99:1591,111,0	0/0:18,0:18:54.19:0,54,982	0/0:20,0:20:51.17:0,51,935	0/0:24,0:24:72.25:0,72,1312	0/0:36,0:36:99:0,105,1911	0/0:27,0:27:81.22:0,81,1417	0/0:22,0:22:60.21:0,60,1097	0/0:23,0:23:66.21:0,66,1169	0/0:37,0:37:99:0,105,1924	0/0:27,0:27:81.27:0,81,1450	0/0:39,0:39:99:0,108,1898	./.
chr10	34253152	.	A	AG	686.36	PASS	AB=0.987;AC=7;AF=0.125;AN=56;BaseQRankSum=-0.480;DP=611;FS=1.493;HRun=6;HaplotypeScore=87.1959;InbreedingCoeff=0.7898;MQ=74.40;MQ0=14;MQRankSum=-1.379;QD=5.72;ReadPosRankSum=-0.013;VQSLOD=-0.1681;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:39.07:0,39,390	0/0:3,0:3:6.01:0,6,61	0/1:73,1:32:4.49:4,0,365	0/0:59,0:33:14.03:0,14,237	0/0:24,0:24:63.03:0,63,603	0/0:20,0:20:51.08:0,51,509	0/0:15,0:15:39.06:0,39,384	0/0:28,0:29:54.92:0,55,508	0/0:18,0:18:45.07:0,45,450	0/0:25,0:25:63.06:0,63,603	0/0:21,0:21:50.90:0,51,457	1/1:1,13:14:21.07:258,21,0	0/0:28,0:28:57.27:0,57,614	0/0:18,0:18:41.76:0,42,420	0/0:21,0:21:54.01:0,54,535	0/0:22,0:22:44.95:0,45,425	0/0:24,0:24:60.06:0,60,589	0/0:20,0:20:48.03:0,48,469	0/0:18,0:18:39.03:0,39,367	0/0:26,0:26:63.04:0,63,612	0/0:8,0:8:21.03:0,21,208	0/0:16,0:16:42.07:0,42,417	1/1:4,14:19:27.06:308,27,0	1/1:5,7:12:21.07:258,21,0	0/0:16,0:16:42.01:0,42,394	0/0:20,0:20:51.09:0,51,509	0/0:22,0:22:55.05:0,55,555	0/0:1,0:1:2.99:0,3,24
chr10	34253221	.	AG	A	10183.58	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=-7.312;DP=443;FS=8.400;HRun=2;HaplotypeScore=60.3318;InbreedingCoeff=0.9788;MQ=68.11;MQ0=1;MQRankSum=0.630;QD=36.24;ReadPosRankSum=3.397;VQSLOD=5.2764;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:48.13:0,48,672	0/0:5,0:5:15.05:0,15,224	0/0:11,0:10:27.08:0,27,360	0/0:15,0:15:36.12:0,36,520	0/0:28,0:28:81.26:0,81,1195	0/0:11,0:11:33.11:0,33,493	0/0:6,0:6:18.06:0,18,270	1/1:0,22:22:63.16:798,63,0	0/0:10,0:10:30.10:0,30,444	1/1:0,12:12:33.09:414,33,0	1/1:0,29:29:81.26:1041,81,0	0/0:20,0:20:45.14:0,45,604	1/1:1,15:16:42.14:545,42,0	1/1:0,21:21:63.20:818,63,0	1/1:0,17:17:48.16:623,48,0	1/1:0,13:13:30.10:390,30,0	0/0:19,0:19:57.19:0,57,853	1/1:1,15:16:45.15:583,45,0	1/1:0,15:15:45.15:584,45,0	1/1:0,18:18:48.16:623,48,0	1/1:0,6:6:18.06:234,18,0	1/1:0,9:9:24.08:312,24,0	0/0:17,0:17:45.07:0,45,553	0/0:4,0:4:5.71:0,6,79	1/1:0,23:23:69.22:895,69,0	1/1:2,20:22:21.23:766,21,0	1/1:1,26:27:75.24:973,75,0	1/1:0,15:15:45.15:584,45,0
chr10	34253237	.	A	AAATAAATG	2628.19	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=-6.788;DP=469;FS=3.673;HRun=0;HaplotypeScore=154.3767;InbreedingCoeff=0.5595;MQ=60.37;MQ0=2;MQRankSum=-2.447;QD=26.28;ReadPosRankSum=0.430;VQSLOD=3.3939;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:42.07:0,42,962	0/0:5,0:5:9.03:0,9,254	0/0:9,0:7:11.92:0,12,189	0/0:10,0:10:17.06:0,17,251	0/1:27,0:27:67.36:67,0,616	0/0:13,0:13:10.55:0,11,466	0/0:6,0:6:15.04:0,15,230	0/0:29,0:29:75.86:0,76,1033	0/1:9,0:9:2.96:3,0,304	0/0:15,0:15:36.01:0,36,499	0/0:30,0:30:83.65:0,84,1231	1/1:15,7:22:51.02:1343,51,0	0/0:17,0:17:48.03:0,48,769	0/0:24,0:24:66.10:0,66,1330	0/0:16,0:16:42.03:0,42,752	0/0:14,0:14:36.04:0,36,618	0/1:22,0:22:7.73:8,0,741	0/0:13,0:13:35.67:0,36,593	0/0:17,0:17:50.94:0,51,737	0/0:23,0:23:63.01:0,63,1050	0/0:7,0:7:18.02:0,18,358	0/0:9,0:9:21:0,21,331	1/1:8,7:15:42.76:1219,43,0	1/1:2,3:5:3.01:132,3,0	0/0:30,0:30:86.95:0,87,1414	0/0:22,0:22:66.07:0,66,1038	0/0:28,0:28:81.10:0,81,1471	0/0:16,0:16:48.05:0,48,1061
chr10	34259228	.	TA	T	2769.49	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=9.040;DP=648;FS=0.454;HRun=1;HaplotypeScore=62.9891;InbreedingCoeff=0.9915;MQ=63.94;MQ0=4;MQRankSum=-2.404;QD=26.89;ReadPosRankSum=0.234;VQSLOD=3.3570;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:87.23:0,87,1306	0/0:11,0:11:33.11:0,33,523	0/0:17,0:11:24.05:0,24,351	0/0:11,0:11:29.46:0,29,340	1/1:0,34:29:81.06:1021,81,0	1/1:0,21:18:48.16:665,48,0	1/1:0,12:8:12.04:168,12,0	0/0:26,0:26:78.24:0,78,1185	1/1:0,10:8:24.08:335,24,0	0/0:28,0:28:84.28:0,84,1319	0/0:26,0:26:78.27:0,78,1242	0/0:24,0:24:72.23:0,72,1125	0/0:29,0:29:87.07:0,87,1324	0/0:20,0:20:60.20:0,60,957	0/0:35,0:35:99:0,99,1577	0/0:26,0:26:78.24:0,78,1197	1/1:0,26:25:54.18:754,54,0	0/0:24,0:24:63.21:0,63,997	0/0:26,0:26:78.23:0,78,1181	0/0:27,0:27:81.23:0,81,1221	0/0:33,0:33:99:0,99,1503	0/0:20,0:20:60.20:0,60,959	0/0:27,0:27:81.26:0,81,1265	0/0:16,0:16:45.15:0,45,716	0/0:19,0:19:57.18:0,57,881	0/0:28,0:28:84.25:0,84,1290	0/0:33,0:33:99:0,99,1544	0/0:10,0:10:30.08:0,30,454
chr10	34262837	.	CATTTATGT	C	1547.72	PASS	AB=1.000;AC=21;AF=0.389;AN=54;BaseQRankSum=6.828;DP=588;FS=0.545;HRun=0;HaplotypeScore=174.6886;InbreedingCoeff=-0.0986;MQ=58.22;MQ0=10;MQRankSum=-5.718;QD=4.62;ReadPosRankSum=5.678;VQSLOD=1.6610;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:59.95:0,60,606	0/0:10,0:10:15.41:0,15,123	0/0:28,0:12:26.10:0,26,253	0/0:25,0:7:5.60:0,6,60	0/0:3,25:29:0.47:0,0,2	1/1:2,24:26:12.19:281,12,0	1/1:13,0:13:36.04:502,36,0	0/0:42,0:41:87.01:0,87,783	1/1:1,13:14:3.01:83,3,0	0/1:22,0:22:99:121,0,204	0/1:22,0:22:95.26:95,0,110	1/1:8,0:8:2.01:31,2,0	0/1:31,0:31:99:197,0,226	0/1:24,0:24:51.95:52,0,66	0/1:19,0:19:73.72:74,0,158	0/1:19,0:19:99:114,0,137	./.	0/1:22,0:22:13.14:13,0,141	0/1:14,0:14:41.58:42,0,154	0/0:27,0:25:12.31:0,12,321	0/0:15,0:14:38.64:0,39,301	0/1:20,0:19:11.92:12,0,136	0/0:13,0:13:16.08:0,16,181	0/0:7,0:7:7.55:0,8,75	0/1:20,0:20:6.29:6,0,218	0/1:20,0:20:64.47:64,0,236	0/1:29,0:29:15.94:16,0,113	0/1:12,0:12:6.57:7,0,146
chr10	34262840	.	TTATGTATGTATGTATG	T	7720.57	PASS	AB=1.000;AC=33;AF=0.589;AN=56;BaseQRankSum=-3.749;DP=583;FS=0.652;HRun=0;HaplotypeScore=207.9678;InbreedingCoeff=0.7491;MQ=57.43;MQ0=10;MQRankSum=1.233;QD=20.92;ReadPosRankSum=0.696;VQSLOD=3.6260;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:31:35.08:0,35,953	0/0:3,0:10:11.75:0,12,144	0/0:25,0:10:2.99:0,3,24	0/0:26,0:7:2.94:0,3,18	0/0:26,0:26:0.47:0,0,1	0/0:25,0:25:11.76:0,12,190	0/0:12,0:12:12.50:0,12,225	1/1:19,23:41:67.76:867,68,0	0/0:14,0:14:3.01:0,3,57	1/1:7,14:21:30.06:946,30,0	1/1:5,16:21:26.88:603,27,0	0/1:8,0:8:0.95:1,0,199	1/1:10,23:33:23.30:939,23,0	1/1:3,21:24:14.92:318,15,0	1/1:6,14:20:12:411,12,0	1/1:6,13:19:12.04:529,12,0	0/0:23,0:23:0.47:0,0,1	1/1:8,16:24:5.93:149,6,0	1/1:3,10:13:27.04:525,27,0	1/1:11,17:26:21.30:255,21,0	1/1:16,0:15:14.93:192,15,0	1/1:5,16:20:17.85:231,18,0	0/0:15,0:15:28.89:0,29,324	0/0:7,0:7:5.93:0,6,63	1/1:9,11:20:5.98:152,6,0	1/1:6,13:19:36.12:981,36,0	1/1:5,23:28:11.93:193,12,0	1/1:12,0:12:21.02:428,21,0
chr10	34262872	.	GTATGTATGTATC	G	3545.20	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=6.560;DP=528;FS=4.959;HRun=0;HaplotypeScore=186.1854;InbreedingCoeff=-0.2156;MQ=55.35;MQ0=8;MQRankSum=-5.406;QD=9.69;ReadPosRankSum=8.306;VQSLOD=0.9616;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:29.36:0,29,522	0/0:11,0:11:8.07:0,8,92	0/0:14,0:3:3.90:0,4,55	0/0:18,0:4:4.85:0,5,35	0/0:26,0:26:20.99:0,21,228	0/1:20,0:20:7.53:8,0,96	0/0:15,0:15:34.75:0,35,390	0/0:37,0:34:47.72:0,48,410	0/0:14,0:14:17.84:0,18,187	0/1:18,0:18:73.78:320,0,74	0/1:17,0:17:73.85:216,0,74	1/1:9,7:16:33.52:435,34,0	0/1:25,0:25:38.32:436,0,38	0/1:26,0:26:99:100,0,142	0/1:15,0:15:26.94:181,0,27	0/1:19,0:19:99:237,0,119	0/1:17,0:17:0:0,0,0	0/1:20,0:20:38.97:56,0,39	0/1:15,0:13:82.86:107,0,83	0/1:21,0:20:33.94:34,0,174	0/1:14,0:13:1.29:1,0,99	0/1:20,0:20:37.78:38,0,155	1/1:12,5:17:42.04:659,42,0	1/1:12,0:12:15.01:366,15,0	0/1:18,0:18:39.98:40,0,167	0/1:15,0:15:71.57:201,0,72	0/1:30,0:30:33.38:33,0,191	0/1:11,0:11:58.65:78,0,59
chr10	34262959	.	TTA	T	1424.39	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=0.033;DP=561;FS=0.000;HRun=0;HaplotypeScore=106.8992;InbreedingCoeff=0.8565;MQ=76.95;MQ0=0;MQRankSum=-0.491;QD=19.25;ReadPosRankSum=-2.806;VQSLOD=3.2216;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:32:93.15:0,93,1563	0/0:12,0:12:36.11:0,36,659	0/0:28,0:18:45.27:0,45,464	0/0:19,0:17:34.88:0,35,377	0/0:23,0:23:69.17:0,69,1228	0/0:15,0:15:42.14:0,42,835	0/0:13,0:13:39.13:0,39,735	0/0:40,0:40:24.39:0,24,818	0/0:12,0:12:36.10:0,36,619	0/0:25,0:25:69.28:0,69,572	0/0:19,0:19:32.26:0,32,444	1/1:0,20:20:42.14:650,42,0	0/0:17,0:17:33.44:0,33,402	0/0:18,0:18:51.85:0,52,451	0/0:20,0:20:42.42:0,42,492	0/0:22,0:22:44.30:0,44,522	0/0:13,0:13:39.09:0,39,690	0/0:21,0:21:13.40:0,13,423	0/0:15,0:15:44.94:0,45,388	0/1:25,0:25:2.59:3,0,472	0/0:8,0:8:24.01:0,24,224	0/0:15,0:15:41.63:0,42,348	1/1:0,12:12:32.98:452,33,0	1/1:0,17:17:30.10:464,30,0	0/0:21,0:21:39.91:0,40,485	0/0:29,0:29:7.09:0,7,542	0/0:36,0:36:99:0,108,949	0/0:13,0:13:38.99:0,39,358
chr10	34264352	.	G	GAA	7606.12	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-0.159;DP=605;FS=12.828;HRun=8;HaplotypeScore=62.9176;InbreedingCoeff=0.8341;MQ=50.70;MQ0=25;MQRankSum=-8.336;QD=15.55;ReadPosRankSum=-0.573;VQSLOD=1.3770;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,0:35:55.85:212,56,0	0/0:6,0:6:15.04:0,15,167	0/0:17,0:4:6.01:0,6,67	0/0:18,0:10:3.40:0,3,86	1/1:2,0:14:22.97:97,23,0	1/1:7,0:25:4.58:91,5,0	1/1:4,0:6:7.36:26,7,0	1/1:10,21:29:63.18:957,63,0	1/1:0,0:12:26.99:92,27,0	1/1:4,15:15:30.09:446,30,0	1/1:1,12:10:20.47:239,20,0	0/0:22,0:20:7.24:0,7,521	1/1:1,24:21:45.15:713,45,0	1/1:2,18:14:27.05:400,27,0	1/1:1,22:19:32.55:456,33,0	1/1:4,25:20:42.14:666,42,0	1/1:3,0:32:52.65:184,53,0	1/1:2,15:13:30.10:475,30,0	1/1:7,7:12:18.06:285,18,0	1/1:6,21:15:32.99:441,33,0	1/1:4,2:6:6.02:95,6,0	1/1:3,15:13:8.99:115,9,0	0/0:26,0:25:51.09:0,51,547	0/0:26,0:26:66.09:0,66,708	1/1:6,18:18:30.10:475,30,0	1/1:5,16:11:24.08:381,24,0	1/1:1,30:27:38.99:618,39,0	1/1:1,10:7:9.03:143,9,0
chr10	34268924	.	C	CA	3526.66	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-11.519;DP=702;FS=5.840;HRun=6;HaplotypeScore=71.4880;InbreedingCoeff=0.9991;MQ=67.48;MQ0=2;MQRankSum=1.733;QD=28.91;ReadPosRankSum=1.995;VQSLOD=4.5079;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,153,1528	0/0:13,0:13:39.09:0,39,397	0/0:31,0:23:47.92:0,48,443	0/0:46,0:33:56.14:0,56,623	1/1:4,23:26:63.20:792,63,0	1/1:3,21:24:51.16:641,51,0	1/1:5,23:27:54.17:677,54,0	0/0:27,0:27:45.04:0,45,439	1/1:0,15:15:42.09:510,42,0	0/0:35,0:35:96.18:0,96,961	0/0:11,0:11:27.06:0,27,275	0/0:32,0:31:84.04:0,84,834	0/0:25,0:25:72.08:0,72,702	0/0:25,0:25:66.13:0,66,667	0/0:25,0:25:74.87:0,75,729	0/0:26,0:25:63.14:0,63,642	1/1:2,26:28:72.23:906,72,0	0/0:18,0:18:45.10:0,45,458	0/0:21,0:21:53.85:0,54,546	0/0:21,0:21:51.11:0,51,520	0/0:31,0:31:87.15:0,87,871	0/0:21,0:21:54.10:0,54,542	0/0:15,0:15:30.01:0,30,295	0/0:26,0:26:75.13:0,75,754	0/0:23,0:23:63.12:0,63,634	0/0:25,0:25:63.12:0,63,633	0/0:18,0:17:36.07:0,36,367	0/0:9,0:9:24.05:0,24,245
chr10	34275777	.	C	CA	4475.96	PASS	AB=0.790;AC=38;AF=0.679;AN=56;BaseQRankSum=-6.320;DP=553;FS=1.607;HRun=13;HaplotypeScore=83.1965;InbreedingCoeff=0.4738;MQ=65.68;MQ0=5;MQRankSum=-1.765;QD=9.99;ReadPosRankSum=-2.305;VQSLOD=3.9057;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:22,1:24:24.35:24,0,203	0/0:7,0:8:19.85:0,20,127	0/0:25,0:13:4.68:0,5,89	0/1:18,0:10:3.92:4,0,63	0/1:14,0:14:2.61:3,0,73	0/0:22,0:22:14.43:0,14,142	0/0:7,0:7:8.63:0,9,45	0/1:8,13:21:26.26:304,0,26	0/0:20,0:18:21.82:0,22,117	1/1:7,17:24:29:389,29,0	1/1:8,10:18:8.10:187,8,0	1/1:11,0:17:17.99:89,18,0	0/1:12,13:23:14.20:152,0,14	1/1:7,16:24:26.86:234,27,0	1/1:4,20:25:16.91:302,17,0	1/1:7,12:20:27.20:243,27,0	0/0:22,0:22:30.29:0,30,168	0/1:2,6:9:5.72:83,0,6	1/1:9,18:30:12.64:488,13,0	1/1:15,17:33:4.73:397,5,0	1/1:3,11:14:12.44:254,12,0	1/1:8,11:19:23.72:184,24,0	1/1:8,0:12:14.24:72,14,0	1/1:10,0:19:20.06:106,20,0	1/1:3,11:13:6.72:203,7,0	1/1:10,11:23:24.26:230,24,0	1/1:6,11:18:3.28:161,3,0	1/1:1,17:18:24.47:369,24,0
chr10	34277073	.	GAAAC	G	1407.46	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=7.734;DP=439;FS=2.558;HRun=0;HaplotypeScore=66.5157;InbreedingCoeff=0.9008;MQ=58.86;MQ0=3;MQRankSum=-0.841;QD=45.40;ReadPosRankSum=-0.841;VQSLOD=3.4956;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:72.25:0,72,1870	0/0:4,0:4:12.04:0,12,298	0/0:13,0:2:6.02:0,6,164	0/0:14,0:4:5.56:0,6,146	0/0:14,0:14:42.14:0,42,1142	0/0:20,0:20:57.18:0,57,1503	0/0:16,0:16:48.16:0,48,1248	0/0:28,0:28:78.27:0,78,2071	0/0:10,0:10:27.09:0,27,739	0/0:20,0:20:57.19:0,57,1502	0/0:16,0:16:45.15:0,45,1187	1/1:0,18:18:48.16:930,48,0	0/0:24,0:24:72.25:0,72,1971	0/0:19,0:19:57.20:0,57,1544	0/0:8,0:8:24.08:0,24,658	0/0:9,0:9:21.07:0,21,543	0/0:19,0:19:51.18:0,51,1368	0/0:15,0:15:45.15:0,45,1224	0/0:26,0:24:72.23:0,72,1864	0/0:17,0:17:48.16:0,48,1315	0/0:19,0:19:57.20:0,57,1539	0/0:8,0:8:24.08:0,24,588	1/1:0,7:8:21.07:383,21,0	1/1:0,5:5:12.04:233,12,0	0/0:19,0:19:57.20:0,57,1554	0/0:22,0:21:63.22:0,63,1690	0/0:15,0:15:42.13:0,42,1067	0/0:8,0:8:24.08:0,24,658
chr10	34277239	.	CATTTATTTATTTATTTATTTATTT	C	3570.62	PASS	AB=0.807;AC=32;AF=0.696;AN=46;BaseQRankSum=4.601;DP=290;FS=0.000;HRun=0;HaplotypeScore=151.3754;InbreedingCoeff=0.3127;MQ=65.15;MQ0=2;MQRankSum=0.409;QD=15.39;ReadPosRankSum=-1.823;VQSLOD=2.1999;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:16:15.02:0,15,358	0/0:2,0:2:6.02:0,6,664	0/1:11,0:9:0:0,0,0	./.	0/0:6,0:10:6:0,6,76	0/1:8,0:16:99:178,0,199	./.	1/1:22,0:21:6.01:81,6,0	0/1:6,0:7:75.42:75,0,133	1/1:8,5:12:15.03:428,15,0	1/1:5,5:10:8.99:115,9,0	0/0:7,0:7:12.04:0,12,382	1/1:8,4:12:3.01:102,3,0	1/1:5,0:5:3.01:52,3,0	1/1:6,4:10:3.01:186,3,0	1/1:2,4:6:3.01:186,3,0	0/1:12,0:22:99:240,0,180	1/1:12,0:12:2.98:21,3,0	1/1:14,6:20:17.48:545,17,0	./.	1/1:7,0:7:5.98:82,6,0	./.	0/0:1,0:1:3.01:0,3,97	./.	1/1:7,8:16:9.03:511,9,0	1/1:6,4:10:12.01:398,12,0	1/1:16,9:25:3.01:184,3,0	1/1:7,1:8:3.01:188,3,0
chr10	34277263	.	T	TC	1341.75	PASS	AB=0.843;AC=12;AF=0.240;AN=50;BaseQRankSum=-0.693;DP=204;FS=0.000;HRun=0;HaplotypeScore=42.0497;InbreedingCoeff=-0.2411;MQ=52.46;MQ0=2;MQRankSum=4.314;QD=14.74;ReadPosRankSum=-2.157;VQSLOD=4.0211;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:15.05:0,15,207	0/0:2,0:2:6.02:0,6,84	1/1:4,0:2:0.89:2,1,0	./.	0/0:7,0:7:10.85:0,11,129	0/0:16,0:16:31.43:0,31,343	./.	0/1:8,15:22:99:612,0,177	0/0:6,0:6:14.54:0,15,176	0/1:7,0:6:30.30:150,0,30	0/1:5,0:5:21.67:86,0,22	0/0:5,0:5:15.05:0,15,208	0/1:7,0:7:35.51:36,0,99	0/1:2,2:4:64.35:83,0,64	0/0:5,0:5:5.38:0,5,43	0/0:4,0:4:2.37:0,2,8	0/0:16,0:16:20.41:0,20,196	0/1:5,1:6:29.61:30,0,159	0/1:12,0:12:99:138,0,153	0/1:3,4:7:87.30:125,0,87	0/1:3,3:6:89.07:119,0,89	./.	0/0:1,0:1:3.01:0,3,42	0/0:1,0:1:3.01:0,3,42	0/0:13,0:13:19.71:0,20,182	0/1:9,0:9:94.25:94,0,131	0/0:19,0:19:32.65:0,33,341	0/0:2,0:2:2.04:0,2,6
chr10	34277917	.	GA	G	14925.31	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-1.968;DP=659;FS=1.293;HRun=6;HaplotypeScore=67.5321;InbreedingCoeff=0.9925;MQ=70.16;MQ0=11;MQRankSum=-2.503;QD=25.47;ReadPosRankSum=5.882;VQSLOD=4.6808;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,44:43:99:1257,117,0	0/0:8,0:8:21.07:0,21,276	0/0:38,0:28:35.42:0,35,652	0/0:27,0:19:18.75:0,19,438	1/1:2,21:23:60.15:645,60,0	1/1:3,18:19:39.10:419,39,0	1/1:1,25:22:57.14:612,57,0	1/1:4,22:18:42.11:451,42,0	1/1:1,23:20:51.13:548,51,0	1/1:0,22:22:66.13:697,66,0	1/1:3,8:11:18.04:193,18,0	1/1:2,15:16:42.10:449,42,0	1/1:3,22:24:57.14:612,57,0	1/1:0,25:24:54.14:580,54,0	1/1:1,26:27:72.18:774,72,0	1/1:3,36:38:99:1096,102,0	1/1:3,31:32:81.20:871,81,0	1/1:1,18:19:51.13:548,51,0	1/1:3,15:15:45.11:484,45,0	1/1:1,21:22:54:580,54,0	1/1:1,25:24:63.16:677,63,0	1/1:2,12:14:27.07:290,27,0	1/1:4,13:17:39.10:419,39,0	1/1:2,15:15:39.10:419,39,0	1/1:1,23:24:66.16:705,66,0	1/1:5,23:27:66.12:696,66,0	1/1:0,24:24:53.90:580,54,0	1/1:0,10:10:30.08:322,30,0
chr10	34279045	.	ACAGT	A	3780.61	PASS	AC=6;AF=0.111;AN=54;BaseQRankSum=11.801;DP=668;FS=0.000;HRun=0;HaplotypeScore=95.9872;InbreedingCoeff=0.9398;MQ=56.14;MQ0=36;MQRankSum=-0.178;QD=42.01;ReadPosRankSum=2.291;VQSLOD=3.6556;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:72.25:0,72,1906	0/0:13,0:12:33.11:0,33,883	./.	0/0:33,0:2:3.01:0,3,82	0/0:15,0:15:36.12:0,36,972	0/0:20,0:20:51.16:0,51,1312	0/0:20,0:20:48.15:0,48,1248	0/0:22,0:18:51.18:0,51,1376	0/0:25,0:25:69.24:0,69,1868	0/0:22,0:22:66.23:0,66,1790	0/0:18,0:18:42.13:0,42,1070	1/1:0,39:37:90.31:1744,90,0	0/0:25,0:25:72.23:0,72,1855	0/0:33,0:33:84.29:0,84,2232	0/0:31,0:31:93.29:0,93,2376	0/0:30,0:30:87.30:0,87,2383	0/0:30,0:30:66.20:0,66,1727	0/0:19,0:19:57.20:0,57,1530	0/0:19,0:15:45.15:0,45,1211	0/0:21,0:21:57.19:0,57,1455	0/0:32,0:29:78.27:0,78,2124	0/0:15,0:15:39.13:0,39,1021	1/1:0,16:16:39.09:699,39,0	1/1:1,34:35:68.96:1337,69,0	0/0:22,0:21:60.20:0,60,1578	0/0:19,0:19:57.20:0,57,1543	0/0:33,0:32:96.31:0,96,2569	0/0:9,0:9:27.03:0,27,513
chr10	34279835	.	CA	C	17658.81	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=0.301;DP=719;FS=6.352;HRun=5;HaplotypeScore=75.9388;InbreedingCoeff=0.9906;MQ=68.85;MQ0=6;MQRankSum=-0.754;QD=28.30;ReadPosRankSum=5.610;VQSLOD=5.0199;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:69.21:0,69,925	0/0:11,0:11:33.11:0,33,449	0/0:33,0:29:81.13:0,81,1019	0/0:22,0:21:60.14:0,60,768	1/1:1,27:28:63.18:714,63,0	1/1:5,19:24:51.14:578,51,0	1/1:2,30:30:75.21:851,75,0	1/1:6,29:32:84.20:930,84,0	1/1:1,29:30:78.22:885,78,0	1/1:1,29:29:84.24:953,84,0	1/1:2,11:12:30.07:331,30,0	1/1:2,29:31:75.21:851,75,0	1/1:1,25:26:66.14:748,66,0	1/1:2,36:38:96.27:1089,96,0	1/1:2,34:36:99:1123,99,0	1/1:5,35:40:96.27:1089,96,0	1/1:0,25:25:69.20:782,69,0	1/1:2,14:16:39.11:442,39,0	1/1:1,8:9:24.07:272,24,0	1/1:2,20:21:54.15:612,54,0	1/1:1,24:25:69.20:783,69,0	1/1:2,26:28:72.07:816,72,0	1/1:1,19:20:48.14:544,48,0	1/1:2,37:39:99:1123,99,0	1/1:2,12:14:33.09:374,33,0	1/1:1,21:22:63.18:714,63,0	1/1:2,31:33:81.23:918,81,0	1/1:1,7:8:12.03:136,12,0
chr10	34281151	.	C	CAAA	5669.16	PASS	AB=0.843;AC=37;AF=0.661;AN=56;BaseQRankSum=-5.592;DP=459;FS=6.435;HRun=13;HaplotypeScore=88.9662;InbreedingCoeff=0.5910;MQ=66.87;MQ0=2;MQRankSum=-1.366;QD=16.53;ReadPosRankSum=-5.799;VQSLOD=2.1516;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:2,5:8:8.99:100,9,0	0/1:4,0:8:18.05:18,0,23	0/1:9,0:11:4.75:5,0,41	0/1:9,0:9:30.85:31,0,50	0/0:3,0:20:40.99:0,41,244	0/0:3,0:21:44.06:0,44,264	0/0:2,0:12:29.37:0,29,176	1/1:12,12:24:39.05:553,39,0	0/0:2,0:7:14.66:0,15,88	1/1:8,12:20:47.11:673,47,0	1/1:3,6:12:29.95:402,30,0	0/1:14,0:16:2.85:3,0,163	1/1:4,1:11:6:76,6,0	1/1:7,8:16:21.07:328,21,0	1/1:3,11:18:15.03:221,15,0	0/1:5,8:17:5.68:119,0,6	0/0:3,0:18:35.24:0,35,212	1/1:2,10:12:12.04:214,12,0	1/1:14,0:15:5.50:330,6,0	1/1:8,18:31:59.97:790,60,0	1/1:0,0:7:2.99:23,3,0	1/1:3,7:10:18.01:269,18,0	0/0:23,0:26:21.59:0,22,411	0/0:8,0:12:11.60:0,12,126	1/1:4,16:24:18.06:318,18,0	1/1:7,11:23:45.04:587,45,0	1/1:10,18:31:22.30:327,22,0	1/1:6,3:10:18.52:282,19,0
chr10	34283168	.	TG	T	1887.56	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.662;DP=673;FS=0.481;HRun=6;HaplotypeScore=66.5564;InbreedingCoeff=0.9980;MQ=76.04;MQ0=0;MQRankSum=-1.958;QD=24.84;ReadPosRankSum=1.702;VQSLOD=3.7133;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,99,1261	0/0:9,0:9:27.09:0,27,353	0/0:19,0:18:51.10:0,51,631	0/0:29,0:29:45.23:0,45,836	0/0:10,0:10:24.08:0,24,314	0/0:24,0:24:69.19:0,69,867	0/0:25,0:25:69.21:0,69,894	0/0:36,0:36:81.23:0,81,1015	0/0:18,0:18:51.17:0,51,671	0/0:20,0:20:57.15:0,57,685	0/0:11,0:11:24.08:0,24,314	1/1:3,26:29:72.18:774,72,0	0/0:16,0:16:45.14:0,45,577	0/0:26,0:26:72.22:0,72,932	0/0:29,0:29:78.24:0,78,1011	0/0:25,0:25:72.18:0,72,915	0/0:37,0:37:99:0,105,1367	0/0:35,0:35:99:0,99,1290	0/0:21,0:21:51.15:0,51,652	0/0:22,0:22:54.15:0,54,675	0/0:47,0:47:99:0,129,1644	0/0:15,0:15:42.11:0,42,523	1/1:3,15:18:42.10:451,42,0	1/1:2,27:29:75.19:806,75,0	0/0:19,0:19:54.08:0,54,659	0/0:30,0:30:90.25:0,90,1111	0/0:26,0:26:72.20:0,72,914	0/0:10,0:10:30.08:0,30,379
chr10	34284663	.	C	CT	11787.33	PASS	AB=0.917;AC=43;AF=0.768;AN=56;BaseQRankSum=-10.386;DP=592;FS=2.036;HRun=10;HaplotypeScore=53.7828;InbreedingCoeff=0.8648;MQ=66.16;MQ0=1;MQRankSum=-0.948;QD=23.86;ReadPosRankSum=-1.261;VQSLOD=5.1286;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:77.87:0,78,640	0/1:10,1:11:8.04:8,0,148	0/0:12,0:10:5.33:0,5,110	0/0:14,0:15:5.37:0,5,100	1/1:6,33:39:76.04:966,76,0	1/1:3,21:25:59.98:622,60,0	1/1:1,14:15:39.10:416,39,0	1/1:8,28:36:84.59:859,85,0	1/1:0,15:15:42.11:448,42,0	1/1:3,20:23:60.11:620,60,0	1/1:4,16:20:55.35:552,55,0	0/0:13,0:13:23.93:0,24,197	1/1:0,18:18:39.10:416,39,0	1/1:3,16:19:39.10:416,39,0	1/1:5,25:30:50.54:743,51,0	1/1:3,13:16:30.08:320,30,0	1/1:1,19:20:54.14:576,54,0	1/1:1,18:20:42.11:447,42,0	1/1:6,16:22:26.58:478,27,0	1/1:0,24:24:68.50:699,69,0	1/1:6,10:16:30.08:320,30,0	1/1:2,18:21:41.89:543,42,0	0/0:16,0:16:35.93:0,36,296	0/0:10,0:10:29.96:0,30,246	1/1:4,21:25:32.61:551,33,0	1/1:4,22:26:66.09:668,66,0	1/1:3,26:29:60.15:640,60,0	1/1:7,17:24:45.11:480,45,0
chr10	34289704	.	CT	C	1721.81	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=10.299;DP=521;FS=1.817;HRun=3;HaplotypeScore=55.7526;InbreedingCoeff=0.9875;MQ=73.38;MQ0=0;MQRankSum=-5.337;QD=29.69;ReadPosRankSum=-1.946;VQSLOD=2.3998;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:7:21.07:0,21,301	0/0:6,0:6:18.06:0,18,259	0/0:12,0:12:30.09:0,30,417	0/0:14,0:14:36.11:0,36,488	0/0:22,0:22:66.22:0,66,950	0/0:28,0:28:75.24:0,75,1061	0/0:12,0:12:33.11:0,33,475	0/0:34,0:34:99:0,99,1426	0/0:15,0:15:45.15:0,45,648	0/0:22,0:22:60.19:0,60,836	0/0:21,0:21:63.21:0,63,905	1/1:1,17:18:51.16:631,51,0	0/0:16,0:16:48.16:0,48,691	0/0:12,0:12:33.11:0,33,475	0/0:23,0:23:66.22:0,66,949	0/0:17,0:17:48.13:0,48,653	0/0:7,0:7:21.07:0,21,302	0/0:26,0:26:72.24:0,72,1034	0/0:20,0:20:51.14:0,51,696	0/0:24,0:24:72.23:0,72,1018	0/0:25,0:25:75.22:0,75,1058	0/0:17,0:17:51.17:0,51,734	1/1:6,21:27:78.21:936,78,0	1/1:3,10:13:24.07:297,24,0	0/0:19,0:19:57.18:0,57,803	0/0:27,0:27:81.27:0,81,1166	0/0:32,0:32:87.29:0,87,1250	0/0:5,0:5:15.02:0,15,177
chr10	34289732	.	CA	C	1132.75	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.825;DP=488;FS=2.790;HRun=8;HaplotypeScore=55.6103;InbreedingCoeff=0.9776;MQ=73.27;MQ0=0;MQRankSum=-5.198;QD=20.98;ReadPosRankSum=1.694;VQSLOD=3.7205;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:6:15.05:0,15,181	0/0:9,0:9:27.06:0,27,312	0/0:8,0:8:21.05:0,21,234	0/0:11,0:11:18.05:0,18,209	0/0:19,0:20:54.03:0,54,631	0/0:23,0:23:63.17:0,63,739	0/0:9,0:9:24.06:0,24,278	0/0:20,0:20:45.13:0,45,534	0/0:16,0:16:48.12:0,48,556	0/0:24,0:24:63.17:0,63,744	0/0:18,0:19:57.04:0,57,667	1/1:0,15:15:42.07:405,42,0	0/0:15,0:15:45.11:0,45,529	0/0:14,0:14:39.12:0,39,471	0/0:27,0:27:75.22:0,75,895	0/0:20,0:20:57.17:0,57,688	0/0:5,0:5:15.03:0,15,168	0/0:23,0:23:45.14:0,45,542	0/0:15,0:15:42.11:0,42,487	0/0:30,0:30:87.27:0,87,1051	0/0:18,0:18:48.11:0,48,544	0/0:19,0:19:54.16:0,54,640	1/1:1,28:29:75.11:724,75,0	1/1:2,8:10:15.02:145,15,0	0/0:17,0:17:48.14:0,48,569	0/0:27,0:27:75.22:0,75,896	0/0:27,0:27:75.23:0,75,901	0/0:12,0:12:36.10:0,36,423
chr10	34291504	.	G	GA	7445.85	PASS	AB=0.604;AC=36;AF=0.643;AN=56;BaseQRankSum=-13.439;DP=485;FS=7.789;HRun=10;HaplotypeScore=56.1573;InbreedingCoeff=0.7905;MQ=72.35;MQ0=1;MQRankSum=-2.569;QD=22.23;ReadPosRankSum=-2.730;VQSLOD=4.6595;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:32.93:0,33,271	0/0:8,0:8:20.97:0,21,172	0/0:16,0:14:4.48:0,4,129	0/0:14,0:10:5.89:0,6,103	0/0:2,0:29:48.86:0,49,142	0/0:3,0:19:28.51:0,29,82	0/0:3,0:10:12.22:0,12,35	1/1:3,16:19:26.45:470,26,0	0/0:2,0:20:34.63:0,35,100	1/1:3,22:26:44.81:649,45,0	1/1:4,15:19:1.81:418,2,0	1/1:5,15:20:42.11:448,42,0	1/1:2,17:19:51.12:539,51,0	1/1:5,11:16:11.45:327,11,0	1/1:1,17:17:45.11:480,45,0	0/1:5,9:14:22.22:197,0,22	0/0:2,0:18:20.37:0,20,59	1/1:0,7:7:12.03:128,12,0	1/1:3,16:19:45.11:479,45,0	1/1:3,21:24:60.15:640,60,0	1/1:1,14:15:24.05:249,24,0	1/1:4,18:22:23.48:455,23,0	0/1:4,8:12:0.58:200,0,1	1/1:1,6:7:15.04:160,15,0	1/1:3,9:13:26.94:271,27,0	1/1:5,19:24:54.14:576,54,0	1/1:4,27:31:38.49:601,38,0	1/1:2,8:10:15.04:160,15,0
chr10	34299026	.	G	GAGAGAC	804.29	PASS	AB=0.977;AC=22;AF=0.524;AN=42;BaseQRankSum=-2.522;DP=266;FS=0.000;HRun=0;HaplotypeScore=52.4711;InbreedingCoeff=0.1333;MQ=31.39;MQ0=58;MQRankSum=1.674;QD=5.00;ReadPosRankSum=0.707;VQSLOD=1.0689;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:4:3:0,3,25	0/0:8,0:7:9.46:0,9,45	./.	0/0:9,0:3:1.47:0,1,18	0/0:12,0:12:2.99:0,3,24	0/1:7,0:7:0.11:0,0,0	0/0:7,0:5:3:0,3,25	1/1:15,0:6:3.88:92,4,0	0/0:13,0:11:5.48:0,5,36	0/1:12,0:8:11.93:12,0,23	1/1:12,0:9:5.97:67,6,0	./.	1/1:6,0:6:1.41:3,1,0	1/1:9,0:9:2.98:24,3,0	1/1:13,1:9:6.46:49,6,0	1/1:8,1:7:5.70:122,6,0	./.	./.	0/1:14,0:10:34.63:100,0,35	0/1:11,0:9:11.07:11,0,13	1/1:10,0:2:2.98:24,3,0	1/1:14,1:12:8.78:119,9,0	./.	./.	0/0:2,7:8:0:0,0,0	0/1:15,0:13:12.65:291,0,13	0/1:9,0:8:9.71:16,0,10	./.
chr10	34299030	.	G	GAC	148.75	PASS	AB=0.952;AC=9;AF=0.196;AN=46;BaseQRankSum=-1.236;DP=279;FS=9.352;HRun=0;HaplotypeScore=46.5656;InbreedingCoeff=-0.1528;MQ=32.63;MQ0=54;MQRankSum=-1.714;QD=1.63;ReadPosRankSum=3.148;VQSLOD=0.0933;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:5:3:0,3,25	0/0:9,0:8:11.27:0,11,61	./.	0/0:14,0:6:7.44:0,7,71	0/0:12,0:12:8.75:0,9,55	0/0:7,0:7:1.55:0,2,5	0/0:9,0:7:7.04:0,7,38	0/1:15,0:7:33.81:34,0,82	0/0:13,0:11:5.11:0,5,37	0/1:6,6:8:23.73:58,0,24	0/0:12,0:9:3.41:0,3,18	./.	1/1:7,0:7:0.45:1,0,0	0/0:11,0:11:3.46:0,3,24	0/0:13,0:10:1.78:0,2,44	0/1:10,0:8:14.63:37,0,15	./.	./.	0/1:13,0:9:16.40:45,0,16	0/0:12,0:9:6.38:0,6,39	0/0:8,0:2:2.73:0,3,24	0/0:16,0:13:5.41:0,5,36	0/0:6,0:5:3:0,3,25	./.	0/1:9,0:8:0:0,0,0	0/1:17,0:14:51.65:66,0,52	0/1:8,0:8:15.85:16,0,19	0/0:7,0:3:2.96:0,3,19
chr10	34300032	.	A	AT	2714.10	PASS	AB=0.975;AC=14;AF=0.250;AN=56;BaseQRankSum=-5.927;DP=600;FS=3.547;HRun=9;HaplotypeScore=66.5113;InbreedingCoeff=0.8743;MQ=69.46;MQ0=0;MQRankSum=-1.382;QD=15.69;ReadPosRankSum=0.717;VQSLOD=3.9635;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,1:40:71.63:367,72,0	0/0:15,0:15:32.99:0,33,286	0/1:15,0:13:0.66:1,0,172	0/0:15,0:15:29.97:0,30,256	1/1:3,16:19:48.09:518,48,0	1/1:2,18:21:50.97:545,51,0	1/1:2,18:20:28.09:538,28,0	0/0:29,0:29:65.93:0,66,573	1/1:4,16:20:39.11:431,39,0	0/0:26,0:26:65.96:0,66,573	0/1:18,1:19:1.96:2,0,336	0/0:20,0:20:44.98:0,45,390	0/0:14,0:14:38.98:0,39,339	0/0:31,0:31:83.95:0,84,725	0/0:25,0:25:65.97:0,66,572	0/0:17,0:17:44.98:0,45,390	1/1:3,16:19:45.12:498,45,0	0/0:16,1:17:8.83:0,9,305	0/0:21,0:21:45.42:0,45,388	0/0:26,0:26:68.96:0,69,598	0/0:35,0:35:77.95:0,78,677	0/0:20,0:20:53.98:0,54,469	0/0:31,0:31:77.89:0,78,677	0/0:23,0:23:62.97:0,63,547	0/0:12,0:12:29.98:0,30,260	0/0:19,0:19:53.99:0,54,469	0/0:22,0:22:50.96:0,51,443	0/0:9,0:9:23.99:0,24,208
chr10	34303189	.	CATATATAT	C	6036.32	PASS	AC=30;AF=0.625;AN=48;BaseQRankSum=-6.154;DP=319;FS=0.717;HRun=0;HaplotypeScore=110.2508;InbreedingCoeff=0.6764;MQ=67.88;MQ0=3;MQRankSum=-3.455;QD=30.49;ReadPosRankSum=-2.656;VQSLOD=4.1056;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:23:26.97:0,27,225	0/0:2,0:3:6.02:0,6,233	1/1:7,0:4:2.03:6,2,0	0/0:15,0:6:3.76:0,4,20	0/0:5,0:13:14.91:0,15,122	0/0:0,0:12:17.98:0,18,150	0/0:2,0:2:3:0,3,25	1/1:7,25:32:75.08:1361,75,0	0/0:2,0:9:14.98:0,15,124	1/1:1,15:16:42.14:1051,42,0	1/1:5,16:21:5.83:158,6,0	1/1:5,3:8:12.01:186,12,0	1/1:1,1:2:3.01:79,3,0	1/1:2,7:9:6.02:158,6,0	1/1:1,5:6:3.01:79,3,0	0/0:3,11:15:2.94:0,3,18	0/0:2,0:9:20.98:0,21,175	1/1:4,5:9:6.02:158,6,0	1/1:3,12:17:45.13:899,45,0	1/1:3,10:13:1.69:76,2,0	./.	./.	1/1:1,4:5:2.91:79,3,0	./.	./.	1/1:3,19:22:56.92:1043,57,0	1/1:3,15:18:12.04:316,12,0	1/1:5,7:12:15.05:388,15,0
chr10	34303301	.	C	CAT	975.49	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=-5.532;DP=510;FS=7.280;HRun=0;HaplotypeScore=60.9627;InbreedingCoeff=0.7772;MQ=61.14;MQ0=5;MQRankSum=0.072;QD=12.84;ReadPosRankSum=1.163;VQSLOD=2.2840;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:93.28:0,93,1168	0/0:6,0:6:12.04:0,12,153	0/0:29,0:10:0.16:0,0,1	0/1:42,0:15:13.25:13,0,134	0/0:21,0:21:51.14:0,51,648	0/0:9,0:9:27.09:0,27,344	0/0:10,0:10:30.10:0,30,382	0/0:44,0:44:99:0,105,1300	0/0:11,0:11:29.96:0,30,380	0/0:19,0:19:48.15:0,48,601	0/0:20,0:20:56.86:0,57,725	1/1:2,11:13:30.10:502,30,0	0/0:14,0:14:30.10:0,30,382	0/0:10,0:10:21.07:0,21,267	0/0:8,0:8:18.03:0,18,202	0/0:13,0:13:39.12:0,39,495	0/0:15,0:15:42.13:0,42,531	0/0:13,0:13:21.07:0,21,263	0/0:17,0:17:45.14:0,45,561	0/0:26,0:26:66.18:0,66,813	0/0:19,0:19:54.17:0,54,687	0/0:11,0:11:30.10:0,30,382	1/1:2,11:13:27.06:452,27,0	1/1:2,5:7:9.03:151,9,0	0/0:25,0:25:66.21:0,66,840	0/0:20,0:20:54.15:0,54,663	0/0:26,0:25:69.18:0,69,847	0/0:12,0:12:36.09:0,36,443
chr10	34305657	.	G	GT	12938.60	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-4.919;DP=471;FS=0.000;HRun=6;HaplotypeScore=74.1006;InbreedingCoeff=0.9771;MQ=86.62;MQ0=0;MQRankSum=-8.253;QD=31.03;ReadPosRankSum=4.831;VQSLOD=5.0667;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,21:21:63.20:792,63,0	0/0:5,0:5:15.03:0,15,153	0/0:27,0:26:63.02:0,63,604	0/0:22,0:18:32.24:0,32,349	1/1:2,16:18:48.08:570,48,0	1/1:2,12:14:36.11:450,36,0	1/1:2,8:10:24.03:284,24,0	1/1:5,20:25:60.19:755,60,0	1/1:1,17:18:45.13:554,45,0	1/1:2,24:26:72.19:867,72,0	1/1:2,14:16:39.12:490,39,0	1/1:2,11:13:30.05:360,30,0	1/1:1,16:17:45.14:566,45,0	1/1:3,14:17:39.12:490,39,0	1/1:1,16:17:42.13:528,42,0	1/1:1,10:11:30.05:359,30,0	1/1:1,14:15:33.11:415,33,0	1/1:0,7:7:21.07:264,21,0	1/1:4,22:26:66.14:774,66,0	1/1:2,17:19:51.10:621,51,0	1/1:3,6:9:18.06:226,18,0	1/1:2,20:22:57.10:681,57,0	1/1:1,9:10:26.59:317,27,0	1/1:1,7:8:15.05:189,15,0	1/1:4,17:21:51.16:641,51,0	1/1:6,18:24:60.17:725,60,0	1/1:3,24:27:66.21:830,66,0	1/1:0,6:6:15.05:189,15,0
chr10	34305685	.	GCTCTCTCTCT	G	5872.76	PASS	AB=0.855;AC=30;AF=0.536;AN=56;BaseQRankSum=4.337;DP=443;FS=0.629;HRun=0;HaplotypeScore=169.6224;InbreedingCoeff=0.6631;MQ=64.78;MQ0=16;MQRankSum=-7.354;QD=25.31;ReadPosRankSum=5.123;VQSLOD=3.8582;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:18,1:20:14:109,0,14	0/0:7,0:7:18.06:0,18,555	0/0:26,0:16:5.03:0,5,29	0/0:30,0:18:5.99:0,6,51	0/0:28,0:29:33.11:0,33,1443	0/0:9,0:11:18.04:0,18,642	0/0:9,0:9:9.50:0,10,374	0/0:21,0:20:0.63:0,1,5	0/0:14,0:20:33.11:0,33,1368	1/1:15,5:20:17.64:421,18,0	1/1:12,3:15:15.05:368,15,0	0/0:12,0:12:3.48:0,3,141	1/1:4,4:8:12.04:357,12,0	1/1:7,8:17:33.11:867,33,0	1/1:11,2:14:9.03:217,9,0	1/1:4,4:11:21.07:567,21,0	0/0:12,0:14:19.62:0,20,710	0/1:6,2:8:13.64:170,0,14	1/1:15,1:16:2.83:89,3,0	1/1:14,3:16:9.03:252,9,0	1/1:6,2:7:6.02:164,6,0	1/1:13,2:14:18:327,18,0	0/0:22,0:20:12.04:0,12,504	0/0:8,0:10:8.06:0,8,260	1/1:9,4:15:18.05:363,18,0	1/1:9,2:14:15.04:348,15,0	1/1:11,10:25:37.46:1165,37,0	1/1:6,1:6:3.01:89,3,0
chr10	34306062	.	A	ACAGAGAC	21054.02	PASS	AB=0.693;AC=27;AF=0.482;AN=56;BaseQRankSum=14.462;DP=432;FS=14.402;HRun=0;HaplotypeScore=246.3136;InbreedingCoeff=-0.5057;MQ=88.92;MQ0=0;MQRankSum=-11.171;QD=57.84;ReadPosRankSum=12.609;VQSLOD=2.8172;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:21.07:0,21,445	0/0:13,0:13:39.13:0,39,1068	0/0:25,0:25:69.24:0,69,1783	0/0:21,0:21:63.18:0,63,1423	0/1:11,10:21:99:698,0,133	0/1:5,14:19:55.01:1547,0,55	0/1:5,6:12:92.93:765,0,93	0/1:21,0:21:99:495,0,274	0/1:12,2:15:99:666,0,188	0/1:17,10:28:99:1885,0,114	0/1:11,4:16:99:518,0,125	1/1:3,6:9:27.09:819,27,0	0/1:6,11:17:74.56:1143,0,75	0/1:10,9:19:99:1270,0,145	0/1:8,7:16:99:798,0,227	0/1:4,7:13:17.14:1032,0,17	0/1:5,4:9:41.73:479,0,42	0/1:1,5:6:33.49:477,0,33	0/1:11,5:16:99:735,0,156	0/1:9,12:21:99:1244,0,216	1/1:2,2:5:15.01:386,15,0	0/1:12,5:18:99:1061,0,184	0/1:9,5:15:99:676,0,209	0/1:3,5:9:40.76:295,0,41	0/1:7,8:15:99:999,0,167	0/1:13,7:20:73.25:1330,0,73	0/1:9,9:19:99:1238,0,194	1/1:0,5:5:15.05:498,15,0
chr10	34306063	.	T	TATGACCTTAC	32774.33	PASS	AB=0.667;AC=47;AF=0.839;AN=56;BaseQRankSum=8.664;DP=438;FS=0.478;HRun=0;HaplotypeScore=232.1954;InbreedingCoeff=0.8380;MQ=89.29;MQ0=0;MQRankSum=-12.014;QD=88.82;ReadPosRankSum=5.131;VQSLOD=4.7373;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:21.07:0,21,535	0/0:13,0:13:39.13:0,39,1243	0/0:25,0:25:72.21:0,72,1931	0/0:22,0:22:46.40:0,46,1406	1/1:11,10:21:42.23:1235,42,0	1/1:5,14:19:56.98:2314,57,0	1/1:6,6:12:11.83:1179,12,0	1/1:23,0:23:57.03:1392,57,0	1/1:14,2:16:42.06:1291,42,0	1/1:18,10:28:53.44:2988,53,0	1/1:12,4:16:14.65:713,15,0	1/1:3,6:9:27.09:1171,27,0	1/1:5,11:16:45.07:1682,45,0	1/1:12,9:21:57.11:2119,57,0	1/1:10,7:17:39.70:1230,40,0	1/1:6,7:13:9.47:1315,9,0	1/1:6,4:10:17.05:838,17,0	1/1:1,5:6:17.95:713,18,0	1/1:10,5:15:42.05:1349,42,0	1/1:9,12:21:59.57:1871,60,0	0/1:2,2:4:12.57:400,0,13	1/1:13,5:18:28.28:1508,28,0	1/1:10,5:15:34.75:954,35,0	1/1:4,5:9:15.44:489,15,0	1/1:7,8:15:45.06:1407,45,0	1/1:14,7:21:57.19:2173,57,0	1/1:10,9:19:54.01:1840,54,0	1/1:0,5:5:15.05:603,15,0
chr10	34306145	.	C	CTTT	16200.05	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=-8.156;DP=469;FS=0.472;HRun=7;HaplotypeScore=76.2133;InbreedingCoeff=0.9937;MQ=71.54;MQ0=1;MQRankSum=-4.654;QD=42.74;ReadPosRankSum=-1.736;VQSLOD=4.3604;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:17:33.34:0,33,562	0/0:10,0:10:24.08:0,24,328	0/0:10,0:10:18.02:0,18,237	0/0:10,0:10:15.87:0,16,186	1/1:3,0:21:53.77:414,54,0	1/1:2,0:16:41.84:325,42,0	1/1:0,0:11:32.89:260,33,0	1/1:3,17:23:66.18:1267,66,0	1/1:2,0:13:26.90:209,27,0	1/1:3,18:22:57.16:1104,57,0	1/1:4,20:24:51.17:1011,51,0	0/0:8,0:8:24.08:0,24,328	1/1:1,16:17:45.15:932,45,0	1/1:3,12:15:32.88:684,33,0	1/1:6,15:22:48.16:995,48,0	1/1:1,8:9:24.08:498,24,0	1/1:2,0:14:32.89:260,33,0	1/1:2,8:13:30.08:563,30,0	1/1:2,18:22:60.15:1163,60,0	1/1:3,18:23:57.17:1119,57,0	1/1:0,13:13:36.08:704,36,0	1/1:3,17:20:48.16:973,48,0	0/0:19,0:19:57.15:0,57,757	0/0:16,0:16:39.13:0,39,532	1/1:5,14:19:45.15:910,45,0	1/1:6,18:25:60.18:1170,60,0	1/1:5,21:28:60.21:1243,60,0	1/1:0,7:8:21.05:396,21,0
chr10	34306792	.	ATT	A	12792.74	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=10.978;DP=529;FS=9.999;HRun=8;HaplotypeScore=126.2186;InbreedingCoeff=0.9974;MQ=78.43;MQ0=1;MQRankSum=-3.898;QD=31.67;ReadPosRankSum=4.228;VQSLOD=3.7248;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:69.15:0,69,1101	0/0:8,0:8:24.07:0,24,374	0/0:18,0:17:33.97:0,34,597	0/0:16,0:15:31.19:0,31,454	1/1:0,26:26:72.22:878,72,0	1/1:0,25:25:57.18:695,57,0	1/1:4,12:16:33.10:403,33,0	1/1:5,20:25:60.14:705,60,0	1/1:0,17:17:45.14:549,45,0	1/1:0,17:17:48.13:574,48,0	1/1:2,29:31:81.24:988,81,0	0/0:14,0:14:39.12:0,39,478	1/1:1,10:11:30.09:366,30,0	1/1:0,15:15:45.14:549,45,0	1/1:0,15:15:42.13:512,42,0	1/1:1,12:13:36.11:439,36,0	1/1:0,11:11:30.09:366,30,0	1/1:3,8:12:24.06:292,24,0	1/1:1,25:26:75.23:914,75,0	1/1:3,29:32:81.24:988,81,0	1/1:1,24:25:66.21:805,66,0	1/1:1,16:17:42.13:512,42,0	0/0:29,0:29:87.26:0,87,1066	0/0:15,0:15:36.11:0,36,438	1/1:2,15:17:42.13:512,42,0	1/1:0,21:21:63.18:756,63,0	1/1:1,23:24:63.20:769,63,0	1/1:2,6:8:18.05:220,18,0
chr10	34307603	.	AGTGTGTGTGT	A	8071.98	PASS	AC=30;AF=0.600;AN=50;BaseQRankSum=3.283;DP=496;FS=33.695;HRun=0;HaplotypeScore=191.3136;InbreedingCoeff=0.8041;MQ=62.30;MQ0=9;MQRankSum=-8.891;QD=30.93;ReadPosRankSum=0.068;VQSLOD=2.9660;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:27:1.61:0,2,148	0/0:4,0:8:2.53:0,3,70	./.	./.	0/0:21,0:21:14.10:0,14,414	0/0:18,0:18:10.27:0,10,378	0/0:18,0:18:6.55:0,7,191	1/1:27,0:27:9.02:148,9,0	0/0:35,0:33:21:0,21,671	1/1:4,7:11:18.06:496,18,0	1/1:5,7:14:9.50:251,10,0	0/0:17,0:20:30.10:0,30,1146	1/1:10,8:17:21.07:631,21,0	1/1:8,12:20:27.09:812,27,0	1/1:8,4:14:15.05:410,15,0	1/1:5,3:8:6.02:180,6,0	0/0:9,0:9:9.03:0,9,302	./.	1/1:10,7:17:17.28:494,17,0	1/1:13,16:29:39.13:1173,39,0	1/1:17,8:24:0.47:1,0,0	1/1:7,11:19:30.10:881,30,0	0/0:13,0:14:30.10:0,30,1206	0/0:19,0:21:42.14:0,42,1606	1/1:2,5:8:15.94:453,16,0	1/1:7,16:23:42.14:1171,42,0	1/1:9,12:22:30.10:880,30,0	1/1:3,2:5:3.01:90,3,0
chr10	34307604	.	G	GTA	4454.67	PASS	AB=1.000;AC=46;AF=0.821;AN=56;BaseQRankSum=1.912;DP=494;FS=1.842;HRun=0;HaplotypeScore=154.5676;InbreedingCoeff=0.4787;MQ=61.13;MQ0=10;MQRankSum=-4.441;QD=10.46;ReadPosRankSum=-0.384;VQSLOD=4.8161;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:26.81:0,27,214	0/1:8,0:8:12.13:12,0,39	0/0:16,0:13:23.07:0,23,247	0/0:23,0:16:28.72:0,29,262	1/1:20,1:21:29.61:242,30,0	1/1:15,4:19:22.35:216,22,0	1/1:16,3:19:29.20:258,29,0	1/1:25,0:25:65.18:589,65,0	1/1:31,2:31:55.70:541,56,0	1/1:11,0:11:24.76:154,25,0	1/1:14,0:14:12.37:83,12,0	0/1:19,0:19:29.57:126,0,30	1/1:18,0:17:26.49:153,26,0	1/1:20,0:20:32.07:194,32,0	1/1:14,0:14:18.21:115,18,0	1/1:8,0:8:10.24:79,10,0	1/1:7,2:9:19.86:171,20,0	1/1:4,0:3:8.92:64,9,0	1/1:19,0:18:31.16:259,31,0	1/1:28,0:28:36.74:192,37,0	1/1:25,0:24:15.27:105,15,0	1/1:17,0:18:19.90:103,20,0	0/1:15,0:15:56.23:69,0,56	0/1:21,0:21:54.47:106,0,54	1/1:8,0:8:9.14:42,9,0	1/1:23,0:23:54.17:288,54,0	1/1:22,0:22:38:214,38,0	1/1:5,0:5:10.80:77,11,0
chr10	34307633	.	T	TG	215.09	PASS	AB=0.668;AC=5;AF=0.089;AN=56;BaseQRankSum=2.641;DP=510;FS=0.000;HRun=1;HaplotypeScore=143.2408;InbreedingCoeff=-0.0763;MQ=43.49;MQ0=25;MQRankSum=-1.291;QD=2.36;ReadPosRankSum=0.468;VQSLOD=-0.7213;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:11.80:0,12,153	0/0:7,0:7:7.24:0,7,79	0/0:27,0:6:11.97:0,12,132	0/0:44,0:5:8.94:0,9,114	0/1:7,12:19:38.67:39,0,47	0/1:8,8:16:35.73:73,0,36	0/1:8,9:15:9.29:47,0,9	0/0:23,0:23:69.22:0,69,871	0/1:13,14:24:96.18:101,0,96	0/0:17,0:16:40.81:0,41,403	0/0:15,0:15:20.26:0,20,175	0/0:25,0:25:60.11:0,60,746	0/0:10,0:10:19.21:0,19,84	0/0:16,0:16:36.74:0,37,261	0/0:15,0:15:25.66:0,26,212	0/0:6,0:6:11.51:0,12,100	0/1:7,2:8:54.94:73,0,55	0/0:6,0:5:15.05:0,15,191	0/0:15,0:13:31.97:0,32,264	0/0:25,0:25:50.73:0,51,345	0/0:26,0:26:20.73:0,21,249	0/0:18,0:18:45.50:0,46,348	0/0:13,0:13:39.04:0,39,481	0/0:25,0:24:56.81:0,57,690	0/0:9,0:9:19.58:0,20,119	0/0:27,0:27:69.09:0,69,584	0/0:23,0:23:51.58:0,52,426	0/0:3,0:3:5.75:0,6,50
chr10	34307796	.	TATATATATATATATACACAC	T	10534.61	PASS	AC=40;AF=0.833;AN=48;BaseQRankSum=1.643;DP=221;FS=3.881;HRun=0;HaplotypeScore=113.1191;InbreedingCoeff=0.6144;MQ=59.61;MQ0=1;MQRankSum=-4.936;QD=57.25;ReadPosRankSum=0.607;VQSLOD=4.3310;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:6:15.05:0,15,997	0/0:4,0:4:12.04:0,12,998	0/0:5,0:3:8.51:0,9,104	0/0:10,0:4:8.48:0,8,43	1/1:1,12:13:15.05:857,15,0	1/1:0,17:17:33.11:1885,33,0	1/1:0,4:4:3.01:171,3,0	1/1:1,25:25:71.97:1080,72,0	1/1:3,0:3:3.01:44,3,0	1/1:1,0:7:12.02:347,12,0	1/1:0,0:13:18.06:704,18,0	1/1:1,6:7:12.04:685,12,0	1/1:1,0:7:6.02:251,6,0	1/1:4,0:4:3.01:47,3,0	./.	1/1:0,0:3:9.03:376,9,0	1/1:0,8:8:6.02:343,6,0	1/1:0,0:3:3.01:128,3,0	1/1:1,0:15:44.26:1038,44,0	1/1:1,0:7:9.03:406,9,0	./.	./.	1/1:1,7:8:6.02:343,6,0	./.	1/1:3,0:10:12.04:530,12,0	1/1:0,0:15:26.62:913,27,0	1/1:1,0:11:9.03:364,9,0	1/1:3,0:3:2.99:23,3,0
chr10	34307810	.	TACACAC	T	2660.16	PASS	AC=36;AF=0.900;AN=40;BaseQRankSum=4.495;DP=202;FS=3.152;HRun=0;HaplotypeScore=101.0269;InbreedingCoeff=0.5782;MQ=50.11;MQ0=0;MQRankSum=-4.523;QD=15.47;ReadPosRankSum=0.035;VQSLOD=2.6975;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:6:15.01:0,15,243	0/0:4,0:4:12.04:0,12,322	1/1:3,0:2:0.47:1,0,0	./.	1/1:12,0:12:15.05:250,15,0	1/1:17,0:17:33.11:550,33,0	1/1:4,0:4:3.01:50,3,0	1/1:30,0:29:41.71:332,42,0	./.	1/1:6,0:6:6.01:64,6,0	1/1:13,0:13:17.95:175,18,0	1/1:6,0:6:12.04:200,12,0	1/1:6,0:6:6.02:69,6,0	./.	./.	1/1:3,0:3:9.03:101,9,0	1/1:8,0:8:6.02:100,6,0	1/1:3,0:3:3.01:32,3,0	1/1:14,0:14:26.96:245,27,0	1/1:7,0:7:9.03:103,9,0	./.	./.	1/1:7,0:7:6.02:100,6,0	./.	1/1:8,0:8:12.03:132,12,0	1/1:15,0:15:17.66:186,18,0	1/1:10,0:10:8.99:86,9,0	./.
chr10	34308092	.	TCACACACACACACA	T	8604.52	PASS	AB=0.734;AC=29;AF=0.518;AN=56;BaseQRankSum=5.528;DP=513;FS=0.000;HRun=0;HaplotypeScore=245.0263;InbreedingCoeff=0.5749;MQ=57.73;MQ0=13;MQRankSum=-8.459;QD=31.29;ReadPosRankSum=-0.461;VQSLOD=3.9082;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:42:57.10:0,57,1736	0/0:3,0:3:9.03:0,9,477	0/0:31,0:17:12.03:0,12,216	0/0:29,0:13:9:0,9,219	0/0:19,0:19:42.13:0,42,2070	0/0:16,0:18:39.13:0,39,2208	0/0:15,0:18:27.09:0,27,1640	1/1:17,0:17:5.49:59,5,0	0/0:31,0:31:67.44:0,67,3614	1/1:7,13:20:26.94:839,27,0	1/1:5,6:11:18.27:243,18,0	0/1:7,0:13:17.01:17,0,135	1/1:6,12:19:20.87:591,21,0	1/1:2,12:14:27.09:792,27,0	1/1:4,14:18:18.06:478,18,0	1/1:6,11:17:15.52:514,16,0	0/0:16,0:16:39.11:0,39,1934	0/1:11,4:14:99:107,0,245	1/1:10,8:18:7.99:546,8,0	1/1:6,10:16:27.05:892,27,0	0/1:20,1:22:99:183,0,122	1/1:7,5:12:20.45:477,20,0	0/0:4,0:12:20.76:0,21,162	0/0:6,0:15:6.02:0,6,79	1/1:2,8:11:27.09:680,27,0	1/1:12,10:22:15:843,15,0	0/1:8,13:23:99:1000,0,123	0/1:3,4:7:78.24:344,0,78
chr10	34308218	.	GACACACACAC	G	792.72	PASS	AB=0.934;AC=11;AF=0.212;AN=52;BaseQRankSum=2.829;DP=541;FS=1.059;HRun=0;HaplotypeScore=158.7426;InbreedingCoeff=0.4506;MQ=64.98;MQ0=6;MQRankSum=-2.889;QD=5.54;ReadPosRankSum=0.596;VQSLOD=2.6444;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:35.70:0,36,1136	0/0:2,0:2:3.01:0,3,145	./.	./.	1/1:12,4:16:0.47:1,0,0	1/1:17,4:21:5.08:84,5,0	0/1:17,3:20:1.13:345,0,1	0/0:27,0:27:17.42:0,17,354	1/1:16,11:26:7.70:348,8,0	0/0:17,0:17:27.09:0,27,854	0/0:14,0:14:24.07:0,24,816	0/0:12,0:14:6.49:0,6,102	0/0:13,0:14:9.03:0,9,387	0/0:18,0:18:18.05:0,18,570	0/0:12,0:16:20.96:0,21,723	0/0:13,0:14:30.10:0,30,1219	1/1:17,2:19:3.01:89,3,0	0/0:8,0:9:9.03:0,9,362	0/1:25,0:25:45.17:45,0,658	0/0:14,0:14:12.04:0,12,414	0/0:58,0:58:57.97:0,58,1783	0/0:17,0:18:30.10:0,30,1064	0/1:13,0:14:11.58:12,0,327	0/0:17,0:21:24.97:0,25,436	0/0:15,0:16:21.07:0,21,713	0/0:18,0:18:36.12:0,36,1248	0/0:21,0:22:36.09:0,36,1145	0/0:4,0:4:3.01:0,3,48
chr10	34308822	.	G	GGTTT	6462.46	PASS	AB=0.679;AC=32;AF=0.571;AN=56;BaseQRankSum=3.234;DP=396;FS=45.153;HRun=0;HaplotypeScore=123.6982;InbreedingCoeff=-0.3139;MQ=72.70;MQ0=2;MQRankSum=-4.352;QD=18.20;ReadPosRankSum=-0.579;VQSLOD=2.6176;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:10,0:27:67.91:308,0,68	0/0:7,0:8:23.99:0,24,321	0/0:17,0:14:27.39:0,27,330	0/0:16,0:14:15.97:0,16,239	1/1:9,0:18:32.40:640,32,0	0/1:5,0:10:15.74:294,0,16	1/1:7,0:13:8.08:343,8,0	0/1:6,0:19:96.41:167,0,96	0/1:14,0:19:35.95:482,0,36	0/1:5,0:13:37.78:152,0,38	0/1:8,0:12:73.18:99,0,73	0/1:1,2:6:15.69:89,0,16	0/1:4,0:7:9.59:86,0,10	1/1:2,0:7:20.87:204,21,0	0/1:10,0:15:10.84:328,0,11	0/1:3,0:5:8.78:134,0,9	0/1:11,0:16:28.32:343,0,28	0/1:3,0:7:26.27:123,0,26	0/1:11,0:13:51.14:142,0,51	1/1:10,0:23:4.89:341,5,0	0/1:6,0:12:72.82:86,0,73	1/1:7,0:14:4.15:272,4,0	0/1:7,0:22:1.35:446,0,1	1/1:2,0:4:6.02:91,6,0	0/1:10,0:16:47.14:192,0,47	0/1:8,0:17:61.13:233,0,61	0/1:6,0:12:8.83:242,0,9	1/1:12,0:19:46.44:627,46,0
chr10	34308871	.	G	GT	10130.67	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=-6.908;DP=447;FS=10.976;HRun=8;HaplotypeScore=72.1365;InbreedingCoeff=0.9830;MQ=93.03;MQ0=1;MQRankSum=-5.243;QD=30.42;ReadPosRankSum=2.539;VQSLOD=4.0544;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:35.99:0,36,323	0/0:6,0:6:18.01:0,18,165	0/0:26,0:26:32.50:0,33,342	0/0:24,0:22:43.53:0,44,349	1/1:1,17:18:51.11:574,51,0	1/1:3,14:17:45.10:504,45,0	1/1:3,4:7:12.04:137,12,0	1/1:4,30:35:68.78:1018,69,0	1/1:1,19:20:54.16:623,54,0	1/1:3,17:20:60.03:657,60,0	1/1:0,19:19:54.16:623,54,0	0/0:9,0:9:18.01:0,18,165	1/1:1,11:11:33.10:381,33,0	1/1:0,11:10:30.09:346,30,0	1/1:0,16:16:48.14:554,48,0	1/1:1,10:10:33.09:373,33,0	1/1:2,15:16:45.13:519,45,0	1/1:1,8:9:24.07:277,24,0	1/1:4,5:9:18.05:204,18,0	1/1:2,19:21:54.15:613,54,0	1/1:1,9:10:24.02:254,24,0	1/1:3,9:12:29.99:318,30,0	0/0:29,0:29:72.14:0,72,639	0/0:4,0:4:12.01:0,12,110	1/1:0,19:19:57.17:658,57,0	1/1:1,15:16:48.06:536,48,0	1/1:1,11:12:27.07:302,27,0	1/1:1,20:21:60.07:661,60,0
chr10	34310601	.	A	AGAAGGG	8172.51	PASS	AC=48;AF=0.889;AN=54;BaseQRankSum=-3.294;DP=167;FS=11.438;HRun=0;HaplotypeScore=27.1854;InbreedingCoeff=0.4508;MQ=35.74;MQ0=5;MQRankSum=-3.965;QD=54.12;ReadPosRankSum=1.507;VQSLOD=3.1028;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:10:4.14:571,4,0	0/0:4,0:4:9.03:0,9,202	0/0:4,0:2:6.02:0,6,135	0/0:6,0:4:11.87:0,12,216	1/1:5,11:13:36.12:1199,36,0	1/1:3,1:4:6.02:204,6,0	1/1:3,0:2:5.92:39,6,0	1/1:5,4:8:18.06:531,18,0	1/1:3,5:7:12.04:412,12,0	1/1:2,4:5:5.98:123,6,0	1/1:2,5:6:12.04:412,12,0	1/1:1,5:5:12.04:413,12,0	1/1:5,3:8:8.90:269,9,0	1/1:0,6:6:9.03:308,9,0	1/1:2,2:4:9.03:307,9,0	1/1:0,4:4:6.02:206,6,0	1/1:1,1:1:3.01:103,3,0	./.	1/1:2,2:4:6.02:206,6,0	1/1:0,5:5:3.01:103,3,0	1/1:2,2:3:3.01:69,3,0	1/1:2,2:4:3.01:101,3,0	1/1:1,15:16:33.11:1133,33,0	1/1:3,1:4:3.01:103,3,0	1/1:3,2:4:12.04:409,12,0	1/1:0,4:4:12.04:413,12,0	1/1:3,5:8:14.51:515,15,0	1/1:1,0:1:2.98:21,3,0
chr10	34310604	.	A	AGGGGAG	6746.65	PASS	AB=1.000;AC=40;AF=0.769;AN=52;BaseQRankSum=-2.979;DP=168;FS=17.661;HRun=0;HaplotypeScore=33.6453;InbreedingCoeff=0.3246;MQ=35.91;MQ0=5;MQRankSum=-2.861;QD=46.21;ReadPosRankSum=4.572;VQSLOD=2.9115;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,7:10:21.07:721,21,0	0/0:4,0:4:9.03:0,9,201	0/0:4,0:2:6.02:0,6,134	0/0:6,0:4:12:0,12,217	1/1:16,0:13:23.14:968,23,0	1/1:4,0:4:6.02:164,6,0	./.	0/1:11,0:10:42.90:369,0,43	1/1:8,0:7:12.04:338,12,0	1/1:6,0:5:3:83,3,0	0/1:7,0:6:2.95:329,0,3	1/1:6,0:5:12.04:336,12,0	1/1:9,0:8:8.77:210,9,0	1/1:6,0:6:9.03:262,9,0	1/1:4,0:4:9.03:253,9,0	1/1:4,0:4:6.02:170,6,0	1/1:2,0:2:3.01:83,3,0	./.	0/1:5,0:4:10.97:155,0,11	1/1:4,0:4:3.01:84,3,0	1/1:3,0:2:3.01:51,3,0	0/1:4,0:4:11.98:76,0,12	1/1:14,0:14:19.13:922,19,0	1/1:4,0:4:3.01:86,3,0	1/1:5,0:4:12.04:336,12,0	1/1:5,0:5:12.04:330,12,0	1/1:8,0:8:14.51:419,15,0	0/0:3,0:3:5.99:0,6,49
chr10	34310696	.	T	TA	285.80	PASS	AB=0.917;AC=8;AF=0.143;AN=56;BaseQRankSum=-1.095;DP=222;FS=5.090;HRun=2;HaplotypeScore=36.7138;InbreedingCoeff=0.5402;MQ=53.93;MQ0=5;MQRankSum=3.052;QD=9.22;ReadPosRankSum=1.217;VQSLOD=1.3221;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:15:42.14:0,42,580	0/0:2,0:2:6.02:0,6,82	0/0:2,0:2:6.02:0,6,82	0/0:2,0:2:6.02:0,6,78	0/0:11,0:10:21.81:0,22,137	0/0:4,0:4:11.70:0,12,67	0/0:4,0:4:9.69:0,10,55	0/0:12,0:10:20.30:0,20,113	0/0:13,0:12:35.06:0,35,201	0/0:8,0:7:20.11:0,20,104	0/0:3,0:3:8.76:0,9,54	1/1:2,6:8:16.29:183,16,0	0/1:4,1:5:16.81:17,0,59	0/0:8,0:7:14.56:0,15,86	0/0:1,0:1:2.84:0,3,14	0/0:5,0:5:14.62:0,15,84	0/0:11,0:11:28.80:0,29,160	0/0:10,0:8:20.54:0,21,121	0/0:10,0:10:25.75:0,26,131	0/0:11,0:11:23.39:0,23,141	0/0:10,0:10:28.98:0,29,167	0/0:4,0:3:5.89:0,6,39	1/1:1,3:4:12.01:121,12,0	1/1:1,3:3:9.02:98,9,0	0/0:13,0:13:34.47:0,34,212	0/0:18,0:16:40.11:0,40,219	0/0:12,0:12:34.75:0,35,199	0/1:10,0:9:7.03:7,0,106
chr10	34311156	.	GC	G	11555	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=4.639;DP=507;FS=2.058;HRun=5;HaplotypeScore=66.4201;InbreedingCoeff=0.8978;MQ=49.45;MQ0=15;MQRankSum=-1.281;QD=27.51;ReadPosRankSum=1.095;VQSLOD=5.0765;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:93.31:0,93,1270	0/0:6,0:4:12.04:0,12,164	0/0:20,0:4:12:0,12,136	0/0:23,0:5:6.02:0,6,73	1/1:1,16:16:21.06:238,21,0	1/1:0,24:24:57.16:647,57,0	1/1:2,14:15:30.09:340,30,0	1/1:2,20:17:45.13:511,45,0	1/1:0,11:11:33.09:374,33,0	1/1:0,26:26:78.22:885,78,0	1/1:1,9:9:24.07:272,24,0	1/1:0,12:12:23.86:271,24,0	1/1:1,18:18:48.14:544,48,0	1/1:0,27:27:69.20:782,69,0	1/1:1,11:12:4.69:312,5,0	1/1:1,12:13:33.09:374,33,0	1/1:1,17:17:45.13:510,45,0	1/1:2,20:22:51.15:579,51,0	1/1:2,15:15:45.13:510,45,0	1/1:1,24:24:63.18:714,63,0	1/1:4,35:37:96.27:1089,96,0	1/1:0,15:15:33.09:374,33,0	1/1:1,13:14:33.09:374,33,0	1/1:1,11:12:33.09:374,33,0	1/1:0,11:11:24.07:272,24,0	1/1:0,19:19:57.14:633,57,0	1/1:0,15:15:42.12:475,42,0	1/1:0,4:4:9.03:102,9,0
chr10	34311419	.	AT	A	5443.41	PASS	AC=46;AF=0.920;AN=50;BaseQRankSum=1.502;DP=330;FS=31.112;HRun=1;HaplotypeScore=28.1473;InbreedingCoeff=0.4931;MQ=26.11;MQ0=35;MQRankSum=-4.470;QD=19.23;ReadPosRankSum=2.143;VQSLOD=3.1770;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:36:42.10:0,42,641	0/0:2,0:2:2.51:0,3,47	./.	./.	1/1:1,8:6:8.93:81,9,0	1/1:0,10:8:15.05:209,15,0	1/1:0,12:7:15.05:209,15,0	1/1:1,8:6:18.02:225,18,0	1/1:0,23:23:36.12:502,36,0	1/1:0,13:11:33.11:460,33,0	1/1:0,3:2:3.01:42,3,0	1/1:0,17:16:27.05:354,27,0	1/1:0,18:15:27.09:376,27,0	1/1:0,21:18:27.05:354,27,0	1/1:0,19:19:36.12:502,36,0	1/1:1,9:7:9.03:125,9,0	1/1:3,8:7:12.04:167,12,0	1/1:3,5:4:3.01:42,3,0	1/1:3,6:6:18.06:251,18,0	1/1:2,5:3:3.01:42,3,0	1/1:6,1:1:3.01:42,3,0	1/1:1,5:4:8.99:104,9,0	1/1:1,5:3:5.93:40,6,0	1/1:0,15:11:11.96:124,12,0	1/1:1,7:4:6.02:84,6,0	1/1:0,17:14:39.13:544,39,0	1/1:1,24:20:42.10:564,42,0	./.
chr10	34313140	.	TAGA	T	295.01	PASS	AB=0.971;AC=12;AF=0.500;AN=24;BaseQRankSum=2.450;DP=894;FS=0.000;HRun=0;HaplotypeScore=38.3451;InbreedingCoeff=0.0713;MQ=8.28;MQ0=785;MQRankSum=-1.282;QD=0.52;ReadPosRankSum=0.165;VQSLOD=0.8211;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/0:12,0:10:27.08:0,27,316	./.	./.	0/1:196,2:26:6.07:6,0,724	./.	./.	./.	./.	1/1:35,3:3:9.03:145,9,0	0/0:106,0:6:9.03:0,9,197	./.	./.	./.	./.	./.	0/1:9,1:2:42.12:42,0,60	./.	./.	1/1:46,4:7:3.01:48,3,0	./.	0/1:113,1:10:24.08:24,0,438	0/1:121,0:4:39.03:39,0,123	./.	0/0:26,0:2:6.02:0,6,132	0/0:27,0:1:3.01:0,3,38	1/1:19,2:1:3.01:48,3,0	1/1:9,1:1:3.01:48,3,0
chr10	34630270	.	CCT	C	12247.80	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=9.237;DP=661;FS=1.651;HRun=0;HaplotypeScore=101.8207;InbreedingCoeff=0.9958;MQ=85.65;MQ0=2;MQRankSum=-5.752;QD=24.40;ReadPosRankSum=5.118;VQSLOD=5.4523;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:28:50.52:161,51,0	0/0:9,0:9:24.08:0,24,385	0/0:37,0:36:86.78:0,87,1281	0/0:29,0:29:71.98:0,72,977	1/1:10,0:10:15.18:48,15,0	1/1:21,0:21:35.02:113,35,0	1/1:29,0:29:56.45:212,56,0	1/1:7,14:21:42.11:525,42,0	1/1:24,0:24:39.96:129,40,0	1/1:3,37:40:99:1418,114,0	1/1:0,13:13:36.02:435,36,0	0/0:32,0:32:96.29:0,96,1551	1/1:6,26:32:75.25:985,75,0	1/1:3,24:26:33.24:690,33,0	1/1:2,30:32:78.22:1029,78,0	1/1:0,24:23:63.21:831,63,0	1/1:25,0:25:48.84:157,49,0	1/1:0,13:13:30.10:396,30,0	1/1:1,14:15:39.08:468,39,0	1/1:4,15:19:48.16:635,48,0	1/1:2,26:28:60.20:792,60,0	1/1:1,22:23:57.19:753,57,0	0/0:16,0:16:45.15:0,45,756	0/0:36,0:36:96.26:0,96,1502	1/1:0,11:11:24.08:317,24,0	1/1:4,17:21:51.14:643,51,0	1/1:3,23:26:66.22:873,66,0	1/1:3,17:20:48.10:635,48,0
chr10	34630271	.	CT	C	7939.80	PASS	AB=1.000;AC=42;AF=0.750;AN=56;BaseQRankSum=12.969;DP=654;FS=0.345;HRun=1;HaplotypeScore=102.5754;InbreedingCoeff=0.7341;MQ=86.25;MQ0=2;MQRankSum=-6.444;QD=16.07;ReadPosRankSum=7.130;VQSLOD=4.8023;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,28:28:69.23:957,69,0	0/0:9,0:9:24.01:0,24,302	0/0:37,0:36:85.93:0,86,1141	0/0:29,0:29:71.29:0,71,916	1/1:0,10:10:21.07:290,21,0	1/1:0,21:21:51.17:702,51,0	1/1:1,28:29:74.99:1015,75,0	0/1:19,0:19:9.69:150,0,10	1/1:0,23:23:57.19:784,57,0	1/1:40,0:40:56.57:458,57,0	1/1:13,0:13:33.37:160,33,0	0/0:32,0:32:96.30:0,96,1334	1/1:30,1:31:0.62:226,1,0	1/1:26,0:25:4.15:168,4,0	1/1:32,0:32:22.70:260,23,0	1/1:24,0:23:57.64:255,58,0	1/1:0,25:25:66.22:919,66,0	1/1:13,0:13:27.45:122,27,0	1/1:14,0:14:36.42:194,36,0	1/1:17,1:18:19.70:169,20,0	1/1:28,0:28:30.64:216,31,0	1/1:22,0:22:52.15:231,52,0	0/0:16,0:16:45.15:0,45,642	0/0:37,0:37:99:0,102,1320	1/1:11,0:11:22.01:98,22,0	0/1:21,0:21:50.05:172,0,50	1/1:25,1:26:36.12:243,36,0	1/1:20,0:20:5.38:151,5,0
chr10	34631201	.	GTTTGT	G	22352.82	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-0.728;DP=474;FS=3.281;HRun=0;HaplotypeScore=168.2345;InbreedingCoeff=0.8603;MQ=63.17;MQ0=0;MQRankSum=-7.293;QD=49.67;ReadPosRankSum=5.733;VQSLOD=5.1775;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,11:12:18.05:346,18,0	1/1:1,4:5:9.03:192,9,0	0/0:18,0:17:41.77:0,42,605	0/0:6,0:6:12:0,12,202	1/1:0,26:26:63.22:1340,63,0	1/1:3,21:24:60.21:1277,60,0	1/1:2,17:19:48.16:1022,48,0	1/1:8,20:28:60.12:1086,60,0	1/1:3,22:25:63.22:1341,63,0	1/1:7,27:34:84.27:1729,84,0	1/1:4,12:16:33.10:663,33,0	1/1:1,18:19:48.16:1022,48,0	1/1:2,15:17:45.15:954,45,0	1/1:2,16:18:42.14:887,42,0	1/1:2,14:16:39.13:830,39,0	1/1:0,13:13:36.12:767,36,0	1/1:2,10:12:21.07:447,21,0	1/1:1,5:6:6.02:128,6,0	1/1:9,8:17:24.08:510,24,0	1/1:2,19:21:54.15:1105,54,0	1/1:2,10:12:24.08:493,24,0	1/1:3,26:29:80.76:1667,81,0	1/1:0,13:13:36.12:766,36,0	1/1:0,4:4:12.04:255,12,0	1/1:2,16:17:39.13:830,39,0	1/1:1,18:19:51.10:970,51,0	1/1:0,24:24:72.25:1533,72,0	1/1:0,3:3:9.03:192,9,0
chr10	34631206	.	T	TG	3925.36	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=0.544;DP=440;FS=1.842;HRun=1;HaplotypeScore=190.4608;InbreedingCoeff=0.8363;MQ=70.16;MQ0=0;MQRankSum=-7.650;QD=9.55;ReadPosRankSum=5.553;VQSLOD=1.6628;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:11:15.79:91,16,0	1/1:4,0:4:7.79:29,8,0	0/0:20,0:20:41.50:0,42,420	0/0:8,0:8:14.92:0,15,160	1/1:26,1:27:52.32:242,52,0	1/1:21,0:21:50.42:185,50,0	1/1:17,0:17:40.52:148,41,0	1/1:21,2:23:53.04:347,53,0	1/1:23,0:23:53.67:198,54,0	1/1:27,1:28:73.15:340,73,0	1/1:13,1:14:26.79:130,27,0	1/1:18,0:18:40.83:150,41,0	1/1:16,0:16:36.93:129,37,0	1/1:17,0:17:34.14:122,34,0	1/1:14,0:14:33.05:121,33,0	1/1:13,0:13:30.70:114,31,0	1/1:10,0:10:18.07:68,18,0	1/1:6,0:6:5.19:20,5,0	1/1:8,0:8:22.19:102,22,0	1/1:20,1:21:45.61:199,46,0	1/1:10,0:10:21.05:112,21,0	1/1:27,1:29:65.90:249,66,0	1/1:13,0:13:30.33:110,30,0	1/1:4,0:4:9.61:32,10,0	1/1:17,1:17:36.06:166,36,0	1/1:18,0:18:44.08:260,44,0	1/1:25,0:25:61.34:229,61,0	1/1:3,0:3:8.04:32,8,0
chr10	34631560	.	T	TACAC	3828.11	PASS	AB=0.754;AC=40;AF=0.769;AN=52;BaseQRankSum=-2.237;DP=489;FS=4.567;HRun=0;HaplotypeScore=137.9255;InbreedingCoeff=0.3063;MQ=59.49;MQ0=8;MQRankSum=-0.175;QD=10.26;ReadPosRankSum=0.025;VQSLOD=3.0875;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:18:8.33:0,8,52	1/1:7,3:10:9.03:198,9,0	./.	./.	0/1:22,2:24:7.63:127,0,8	1/1:13,3:17:3.01:70,3,0	1/1:9,3:13:9.03:212,9,0	1/1:23,0:21:3.01:63,3,0	1/1:12,4:16:10.75:213,11,0	1/1:10,9:20:42.32:676,42,0	1/1:15,2:18:11.57:165,12,0	0/0:18,0:19:14.96:0,15,162	1/1:12,6:19:3.48:71,3,0	1/1:10,4:14:3.01:52,3,0	1/1:15,5:22:8.43:153,8,0	0/1:8,9:18:24.76:341,0,25	1/1:7,6:14:14.76:228,15,0	1/1:6,1:7:6.02:116,6,0	1/1:11,0:10:5.99:61,6,0	1/1:13,5:18:3.01:70,3,0	1/1:18,9:29:2.26:69,2,0	0/1:10,1:16:40.64:64,0,41	0/0:20,0:21:20.92:0,21,222	0/0:14,0:14:15.02:0,15,208	0/1:12,6:20:15.89:193,0,16	1/1:18,1:19:27.53:451,28,0	1/1:12,5:19:9.01:163,9,0	1/1:1,2:3:3.01:70,3,0
chr10	34633049	.	CA	C	2007.86	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=0.776;DP=579;FS=2.583;HRun=9;HaplotypeScore=84.3980;InbreedingCoeff=0.9604;MQ=63.34;MQ0=0;MQRankSum=0.952;QD=19.31;ReadPosRankSum=1.564;VQSLOD=4.2061;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:24:56.97:0,57,624	0/0:2,0:11:9.04:0,9,54	0/0:13,0:11:28.30:0,28,295	0/0:16,1:15:7.01:0,7,287	1/1:3,27:30:66.02:604,66,0	1/1:3,17:20:48.02:439,48,0	1/1:3,16:19:24.62:413,25,0	0/0:35,0:35:96.25:0,96,1094	1/1:1,14:15:36.02:330,36,0	0/0:27,0:27:69.14:0,69,757	0/0:18,0:18:42.08:0,42,469	0/0:1,0:17:28.41:0,28,144	0/0:25,0:25:60.17:0,60,685	0/0:19,0:19:50.98:0,51,568	0/0:8,0:8:21.06:0,21,242	0/0:15,1:16:17.67:0,18,457	1/1:5,15:20:30.53:397,31,0	0/0:25,0:25:66.13:0,66,733	0/0:13,0:13:34.90:0,35,369	0/0:32,0:32:79.12:0,79,899	0/0:13,0:13:39.12:0,39,450	0/0:18,0:18:45:0,45,464	0/0:7,0:26:54.48:0,54,300	0/0:1,0:14:16.29:0,16,96	0/0:24,0:24:69.11:0,69,755	0/0:28,0:28:81.24:0,81,935	0/0:38,0:40:99:0,105,1129	0/0:11,0:11:30.08:0,30,339
chr10	34635650	.	C	CA	1005.71	PASS	AB=0.820;AC=9;AF=0.161;AN=56;BaseQRankSum=-5.832;DP=499;FS=0.000;HRun=9;HaplotypeScore=68.6940;InbreedingCoeff=0.6212;MQ=91.27;MQ0=5;MQRankSum=-0.975;QD=9.67;ReadPosRankSum=1.116;VQSLOD=2.1678;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:71.99:0,72,625	0/1:1,4:5:11.02:118,0,11	0/0:65,0:39:10.18:0,10,206	0/1:50,0:32:43.34:43,0,124	0/0:30,1:31:50.80:0,51,670	0/1:11,1:12:3.15:3,0,204	0/0:13,0:13:26.98:0,27,234	0/0:34,0:34:77.92:0,78,672	0/0:8,0:8:17.99:0,18,156	0/0:26,0:26:65.97:0,66,571	0/0:15,0:15:38.99:0,39,339	1/1:0,10:10:27.07:299,27,0	0/0:8,0:8:21:0,21,182	0/0:11,0:11:26.98:0,27,231	0/0:5,0:5:15:0,15,130	0/0:10,0:10:20.98:0,21,182	0/0:14,0:14:32.99:0,33,286	0/0:12,0:12:29.98:0,30,260	0/0:17,1:18:47.98:0,48,417	0/0:15,0:15:44.99:0,45,391	0/0:5,0:5:14.98:0,15,127	0/0:9,0:9:20.99:0,21,182	1/1:4,15:19:45.12:498,45,0	1/1:0,6:6:18.05:199,18,0	0/0:17,1:18:14.80:0,15,357	0/0:14,0:14:38.99:0,39,339	0/0:31,0:31:74.97:0,75,651	0/0:8,0:8:20.99:0,21,182
chr10	34635665	.	A	AT	2056.84	PASS	AB=1.000;AC=12;AF=0.214;AN=56;BaseQRankSum=-7.010;DP=460;FS=0.515;HRun=6;HaplotypeScore=55.2293;InbreedingCoeff=0.7776;MQ=78.58;MQ0=2;MQRankSum=0.866;QD=14.19;ReadPosRankSum=0.449;VQSLOD=2.6282;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:72.16:0,72,732	0/0:5,0:5:12.03:0,12,122	0/1:34,0:19:14.12:14,0,48	0/1:35,0:25:38.58:39,0,117	1/1:5,25:30:69.22:868,69,0	1/1:2,10:12:27.09:335,27,0	1/1:2,7:9:18.06:226,18,0	0/0:32,0:32:69.13:0,69,692	1/1:0,7:7:18.06:226,18,0	0/0:27,0:27:78.18:0,78,796	0/0:17,0:17:48.11:0,48,490	0/0:12,0:12:30.07:0,30,306	0/0:9,0:9:24.05:0,24,245	0/0:11,0:11:33.06:0,33,329	0/0:7,0:7:18.04:0,18,184	0/0:8,0:8:24.05:0,24,245	1/1:1,16:17:42.13:528,42,0	0/0:12,0:12:33.07:0,33,335	0/0:23,0:23:63.14:0,63,643	0/0:19,0:18:57.11:0,57,574	0/0:8,0:8:21.05:0,21,214	0/0:9,0:9:27.06:0,27,275	0/0:17,0:17:45.07:0,45,448	0/0:7,0:7:21.01:0,21,202	0/0:17,0:17:51.12:0,51,520	0/0:14,0:14:42.10:0,42,428	0/0:28,0:28:75.14:0,75,757	0/0:8,0:8:24.05:0,24,245
chr10	34636936	.	GAC	G	1048.19	PASS	AB=0.952;AC=13;AF=0.232;AN=56;BaseQRankSum=5.404;DP=454;FS=18.097;HRun=0;HaplotypeScore=79.9405;InbreedingCoeff=0.0192;MQ=69.36;MQ0=1;MQRankSum=-1.551;QD=5.16;ReadPosRankSum=8.247;VQSLOD=0.1417;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:26,1:27:3.11:162,3,0	0/1:12,1:13:21.63:71,0,22	0/0:16,0:15:36.82:0,37,413	0/0:19,0:17:32.73:0,33,509	0/1:16,3:19:28.61:142,0,29	1/1:14,1:15:20.40:96,20,0	0/1:18,1:19:11.31:127,0,11	0/0:22,0:22:46.73:0,47,385	0/1:19,2:21:69.66:127,0,70	0/0:17,0:17:5.94:0,6,151	0/0:8,0:8:1.66:0,2,61	0/1:17,0:17:52.90:62,0,53	0/0:19,0:19:30.45:0,30,250	0/0:11,0:11:6.83:0,7,67	0/0:11,0:11:30.75:0,31,166	0/0:22,0:22:36.05:0,36,239	0/1:27,1:28:17.89:200,0,18	0/0:14,0:14:26.17:0,26,150	0/1:10,0:10:6.27:6,0,78	0/0:10,0:9:20.88:0,21,100	0/0:19,0:19:34.82:0,35,210	0/0:11,0:11:17.25:0,17,118	0/1:17,1:18:27.53:136,0,28	0/1:16,0:16:17.01:74,0,17	0/0:5,0:5:4.02:0,4,48	0/0:14,0:14:29.85:0,30,264	0/0:25,0:25:28.94:0,29,193	0/0:7,0:7:16.17:0,16,96
chr10	34636939	.	ACC	A	4169.88	PASS	AB=0.617;AC=27;AF=0.482;AN=56;BaseQRankSum=-11.967;DP=444;FS=2.086;HRun=11;HaplotypeScore=69.4576;InbreedingCoeff=0.4687;MQ=70.53;MQ0=1;MQRankSum=-1.198;QD=14.95;ReadPosRankSum=4.288;VQSLOD=2.1606;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,24:27:53.20:562,53,0	1/1:3,10:13:27.06:287,27,0	0/0:19,0:17:26.25:0,26,269	0/0:16,1:16:21.48:0,21,347	1/1:6,11:17:27.03:286,27,0	1/1:1,13:14:24.05:254,24,0	1/1:3,15:19:39.05:470,39,0	0/1:8,1:23:43.59:44,0,54	1/1:7,14:21:36.07:382,36,0	0/1:3,1:14:35.05:35,0,47	0/1:3,1:8:13.95:14,0,34	1/1:3,13:16:26.98:343,27,0	0/1:9,1:18:16.22:16,0,42	0/1:2,1:10:9.23:24,0,9	0/0:11,0:11:14.34:0,14,46	0/0:6,1:22:3.52:0,4,80	1/1:5,22:28:59.88:618,60,0	0/0:2,0:15:20.27:0,20,73	0/1:6,2:10:38.89:44,0,39	0/0:4,0:10:14.74:0,15,51	0/0:6,0:18:25.38:0,25,94	0/0:4,0:11:14.25:0,14,56	1/1:4,14:18:42.10:447,42,0	1/1:2,15:17:30.07:319,30,0	0/1:2,1:6:9.19:24,0,9	0/0:9,0:10:5.51:0,6,55	0/0:11,0:23:25.05:0,25,89	0/0:4,0:7:12.48:0,12,44
chr10	34637157	.	TATGTAGCA	T	12055.23	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=6.723;DP=279;FS=33.735;HRun=0;HaplotypeScore=90.3196;InbreedingCoeff=0.8272;MQ=50.12;MQ0=1;MQRankSum=-9.359;QD=60.28;ReadPosRankSum=1.703;VQSLOD=2.9640;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,14:14:21.07:635,21,0	0/0:4,0:4:12.04:0,12,447	0/0:17,0:15:45.11:0,45,1564	0/0:18,0:18:51.65:0,52,2053	1/1:0,12:12:3.01:91,3,0	1/1:0,11:11:33.11:999,33,0	1/1:0,16:16:33.11:944,33,0	1/1:0,11:11:33.11:960,33,0	1/1:0,7:7:18.06:544,18,0	1/1:0,10:10:30.08:840,30,0	1/1:0,4:4:3.01:91,3,0	0/0:10,0:10:30.10:0,30,1389	1/1:0,8:8:18.06:544,18,0	1/1:0,6:6:18.06:545,18,0	1/1:0,2:2:6.02:181,6,0	1/1:0,8:8:21.07:636,21,0	1/1:0,16:16:36.12:1089,36,0	1/1:1,11:12:24.08:727,24,0	1/1:0,5:5:15.05:454,15,0	1/1:0,3:3:3.01:91,3,0	1/1:0,25:25:17.71:542,18,0	1/1:0,4:4:9.03:272,9,0	0/0:7,0:7:21.07:0,21,972	0/0:23,0:23:66.23:0,66,3007	1/1:0,6:6:12.04:363,12,0	1/1:0,11:11:33.11:872,33,0	1/1:0,7:7:15.05:454,15,0	1/1:0,2:2:6.02:182,6,0
chr10	34637844	.	A	AT	20000.08	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-8.045;DP=622;FS=18.820;HRun=4;HaplotypeScore=57.5849;InbreedingCoeff=0.9915;MQ=83.27;MQ0=0;MQRankSum=-7.990;QD=34.66;ReadPosRankSum=4.764;VQSLOD=2.9899;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,29:29:72.24:984,72,0	1/1:0,11:11:33.11:451,33,0	0/0:25,0:24:35.60:0,36,535	0/0:20,0:18:36.06:0,36,380	1/1:2,25:27:69.19:922,69,0	1/1:0,23:23:60.20:820,60,0	1/1:0,27:27:66.22:902,66,0	1/1:2,24:26:72.17:930,72,0	1/1:2,21:23:54.17:723,54,0	1/1:3,38:41:99:1478,111,0	1/1:2,21:23:54.14:714,54,0	1/1:0,17:17:51.17:698,51,0	1/1:1,18:19:41.95:574,42,0	1/1:3,15:18:39.13:532,39,0	1/1:2,16:18:51.17:692,51,0	1/1:1,18:19:51.17:698,51,0	1/1:3,17:20:51.17:697,51,0	1/1:0,18:18:45.15:615,45,0	1/1:0,16:16:48.14:627,48,0	1/1:1,28:29:81.04:1001,81,0	1/1:0,7:7:15.05:205,15,0	1/1:2,15:17:36.59:494,37,0	1/1:1,23:24:60.20:820,60,0	1/1:0,15:15:45.15:615,45,0	1/1:2,24:26:60.20:820,60,0	1/1:2,23:25:69.19:898,69,0	1/1:0,38:38:95.98:1310,96,0	1/1:0,21:21:57.19:780,57,0
chr10	34638791	.	T	TACAC	1757.65	PASS	AB=0.829;AC=29;AF=0.558;AN=52;BaseQRankSum=-0.953;DP=420;FS=8.893;HRun=0;HaplotypeScore=88.4768;InbreedingCoeff=0.2322;MQ=60.41;MQ0=9;MQRankSum=0.252;QD=7.23;ReadPosRankSum=-2.582;VQSLOD=0.9982;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:18:11.05:0,11,89	1/1:4,0:8:5.49:24,5,0	./.	./.	0/0:11,0:14:3:0,3,28	0/0:18,0:17:4.53:0,5,15	0/0:15,0:15:9.01:0,9,118	1/1:19,0:17:5.98:58,6,0	0/0:14,0:16:8.99:0,9,80	1/1:19,0:20:23.49:217,23,0	0/1:6,7:15:23.39:64,0,23	0/0:8,0:8:5.97:0,6,50	1/1:8,1:15:5.61:84,6,0	0/1:3,6:11:37.62:74,0,38	0/1:13,0:13:34.35:85,0,34	1/1:6,0:6:6.01:87,6,0	0/1:20,0:22:34.55:35,0,234	0/1:16,0:16:25.38:204,0,25	1/1:13,0:13:12:191,12,0	1/1:18,0:18:9:93,9,0	0/1:9,10:19:40.35:64,0,40	1/1:4,0:4:3.01:49,3,0	0/0:16,0:17:14.99:0,15,131	0/0:20,0:20:6.10:0,6,325	0/1:16,0:16:10.94:153,0,11	1/1:3,4:9:15.51:232,16,0	1/1:11,0:11:11.94:91,12,0	1/1:2,2:7:6.02:126,6,0
chr10	34638874	.	GCACA	G	33.31	PASS	AB=0.794;AC=2;AF=0.036;AN=56;BaseQRankSum=4.524;DP=416;FS=3.751;HRun=0;HaplotypeScore=84.8245;InbreedingCoeff=-0.0394;MQ=80.97;MQ0=0;MQRankSum=4.351;QD=0.95;ReadPosRankSum=-1.421;VQSLOD=1.5760;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:81.28:0,81,2123	0/0:6,0:6:18.06:0,18,467	0/1:5,4:9:95.57:96,0,348	0/1:23,3:25:26.30:26,0,1252	0/0:11,0:11:33.11:0,33,894	0/0:18,0:18:48.16:0,48,1295	0/0:22,0:22:66.23:0,66,1753	0/0:16,0:16:48.16:0,48,1272	0/0:12,0:12:36.12:0,36,968	0/0:12,0:12:36.12:0,36,1007	0/0:8,0:8:24.06:0,24,610	0/0:7,0:7:21.07:0,21,586	0/0:9,0:9:24.08:0,24,633	0/0:12,0:12:30.10:0,30,745	0/0:7,0:7:21:0,21,453	0/0:10,0:10:30.10:0,30,805	0/0:38,0:38:99:0,108,2957	0/0:16,0:16:45.15:0,45,1257	0/0:15,0:15:45.13:0,45,1084	0/0:10,0:10:23.83:0,24,648	0/0:46,0:46:99:0,126,3309	0/0:12,0:12:33.11:0,33,913	0/0:6,0:6:15.05:0,15,407	0/0:16,0:16:45.15:0,45,1219	0/0:11,0:11:33.10:0,33,811	0/0:19,0:19:54.17:0,54,1422	0/0:7,0:7:17.92:0,18,443	0/0:5,0:5:15.05:0,15,384
chr10	34639480	.	CTT	C	12860.38	PASS	AC=42;AF=0.778;AN=54;BaseQRankSum=2.760;DP=488;FS=0.000;HRun=5;HaplotypeScore=63.9683;InbreedingCoeff=0.9913;MQ=62.51;MQ0=3;MQRankSum=-0.721;QD=32.98;ReadPosRankSum=3.050;VQSLOD=4.1788;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,40:39:96.32:1343,96,0	0/0:5,0:5:15.04:0,15,245	0/0:10,0:9:16.01:0,16,393	0/0:17,1:16:42.70:0,43,654	1/1:1,15:15:30.10:420,30,0	1/1:0,20:20:57.19:797,57,0	1/1:0,17:17:30.10:420,30,0	1/1:3,12:13:24.08:336,24,0	1/1:3,17:20:42.14:587,42,0	1/1:2,10:12:36.12:490,36,0	1/1:0,11:11:27.09:377,27,0	0/0:18,0:18:51.17:0,51,934	1/1:1,21:22:45.15:629,45,0	1/1:1,16:17:45.15:629,45,0	1/1:0,19:19:57.19:797,57,0	1/1:0,16:16:42.14:587,42,0	1/1:0,34:33:72.24:1007,72,0	1/1:0,16:16:39.13:546,39,0	1/1:1,12:13:36.09:469,36,0	1/1:1,11:11:27.09:375,27,0	1/1:0,31:31:78.26:1091,78,0	1/1:0,9:9:18.06:252,18,0	0/0:17,0:17:48.16:0,48,851	0/0:27,0:27:78.26:0,78,1395	1/1:1,15:16:39.13:545,39,0	1/1:2,18:17:48.14:654,48,0	1/1:3,11:14:39.09:508,39,0	./.
chr10	34639492	.	G	GC	112.21	PASS	AB=0.831;AC=2;AF=0.036;AN=56;BaseQRankSum=4.179;DP=496;FS=0.000;HRun=0;HaplotypeScore=104.8617;InbreedingCoeff=-0.0443;MQ=62.18;MQ0=1;MQRankSum=0.390;QD=3.30;ReadPosRankSum=-2.542;VQSLOD=2.5651;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:36:93.31:0,93,1289	0/0:5,0:5:15.05:0,15,207	0/1:11,5:14:99:150,0,298	0/1:16,2:15:50.60:51,0,373	0/0:18,0:16:33.07:0,33,460	0/0:19,0:19:57.19:0,57,797	0/0:17,0:17:30.10:0,30,420	0/0:20,0:18:45.13:0,45,592	0/0:17,0:17:45.11:0,45,607	0/0:15,0:15:42.13:0,42,565	0/0:9,0:9:27.09:0,27,378	0/0:19,0:19:54.17:0,54,738	0/0:20,0:20:48.16:0,48,671	0/0:17,0:17:48.16:0,48,671	0/0:24,0:24:72.24:0,72,1001	0/0:15,0:15:42.10:0,42,565	0/0:35,0:34:72.18:0,72,961	0/0:16,0:16:39.13:0,39,545	0/0:14,0:13:36.11:0,36,486	0/0:10,0:10:30.10:0,30,419	0/0:36,0:36:93.14:0,93,1272	0/0:10,0:10:21.07:0,21,293	0/0:17,0:17:51.17:0,51,707	0/0:27,0:27:81.27:0,81,1132	0/0:14,0:14:39.13:0,39,545	0/0:18,0:17:51.16:0,51,698	0/0:12,0:12:33.08:0,33,440	0/0:1,0:1:3.01:0,3,41
chr10	34639866	.	GCA	G	13575.97	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=16.219;DP=671;FS=2.448;HRun=0;HaplotypeScore=82.1746;InbreedingCoeff=0.9975;MQ=86.65;MQ0=0;MQRankSum=-3.022;QD=39.70;ReadPosRankSum=2.065;VQSLOD=7.0284;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:59,0:59:99:0,175,3181	0/0:9,0:9:24.08:0,24,449	0/0:19,0:19:54.18:0,54,990	0/0:29,0:29:74.43:0,74,1309	0/0:22,0:22:60.18:0,60,1083	0/0:13,0:13:36.12:0,36,672	0/0:39,0:39:99:0,111,2049	1/1:2,29:30:87.27:1240,87,0	0/0:17,0:17:51.17:0,51,955	1/1:1,25:26:75.24:1084,75,0	1/1:0,15:15:45.15:662,45,0	0/0:26,0:26:75.26:0,75,1397	1/1:0,22:22:66.22:971,66,0	1/1:1,16:17:45.15:663,45,0	1/1:1,26:27:66.22:972,66,0	1/1:0,17:17:48.16:707,48,0	0/0:53,0:53:99:0,154,2832	1/1:0,20:20:48.16:707,48,0	1/1:1,16:17:48.16:697,48,0	1/1:1,21:21:60.20:883,60,0	1/1:3,34:37:90.30:1325,90,0	1/1:0,21:21:60.20:883,60,0	0/0:16,0:16:48.16:0,48,899	0/0:27,0:27:81.28:0,81,1517	1/1:1,16:17:39.13:574,39,0	1/1:0,17:17:51.17:749,51,0	1/1:0,31:31:84.28:1237,84,0	1/1:0,5:5:15.05:221,15,0
chr10	34640314	.	G	GTC	31306.26	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-8.230;DP=645;FS=2.531;HRun=0;HaplotypeScore=59.7306;InbreedingCoeff=0.9944;MQ=79.05;MQ0=2;MQRankSum=-8.780;QD=50.82;ReadPosRankSum=6.409;VQSLOD=5.6475;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,22:23:53.85:1041,54,0	1/1:0,12:14:30.10:579,30,0	0/0:14,0:14:38.92:0,39,561	0/0:15,0:15:40.72:0,41,490	1/1:1,34:35:99:1840,99,0	1/1:0,24:24:66.23:1274,66,0	1/1:1,18:19:48.16:927,48,0	1/1:1,42:44:99:2245,123,0	1/1:0,24:24:66.23:1274,66,0	1/1:1,33:35:99:1819,99,0	1/1:0,18:18:51.17:964,51,0	1/1:0,16:16:48.16:926,48,0	1/1:0,29:30:84.29:1622,84,0	1/1:1,20:21:60.21:1158,60,0	1/1:1,21:22:57.20:1100,57,0	1/1:0,22:22:63.22:1216,63,0	1/1:2,22:24:57.15:1062,57,0	1/1:0,9:9:24.08:463,24,0	1/1:0,15:15:45.15:851,45,0	1/1:2,36:39:96.33:1848,96,0	1/1:0,20:21:57.20:1100,57,0	1/1:1,28:29:81.27:1515,81,0	1/1:1,31:32:84.29:1611,84,0	1/1:1,6:7:18.06:347,18,0	1/1:2,15:17:42.14:811,42,0	1/1:0,26:26:78.18:1398,78,0	1/1:0,34:34:84.29:1620,84,0	1/1:0,14:14:36.12:694,36,0
chr10	34641472	.	C	CA	22480.34	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=4.838;DP=615;FS=0.554;HRun=0;HaplotypeScore=99.1772;InbreedingCoeff=0.9895;MQ=92.63;MQ0=0;MQRankSum=-11.227;QD=40.00;ReadPosRankSum=5.223;VQSLOD=4.8969;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,33:33:99:1491,99,0	1/1:0,6:6:15.05:225,15,0	0/0:26,0:26:78.19:0,78,1051	0/0:27,0:27:72.21:0,72,956	1/1:0,39:40:93.31:1385,93,0	1/1:0,20:20:54.18:807,54,0	1/1:0,13:13:36.12:544,36,0	1/1:0,27:27:78.25:1152,78,0	1/1:0,14:14:36.12:541,36,0	1/1:1,24:25:72.23:1056,72,0	1/1:2,15:17:42.14:630,42,0	1/1:1,14:15:39.13:584,39,0	1/1:0,26:26:66.22:993,66,0	1/1:0,18:18:48.16:719,48,0	1/1:0,19:19:54.18:809,54,0	1/1:0,18:18:51.17:767,51,0	1/1:0,23:23:66.22:992,66,0	1/1:0,11:11:33.11:493,33,0	1/1:3,12:15:39.12:568,39,0	1/1:0,28:28:72.22:1039,72,0	1/1:0,41:41:99:1579,105,0	1/1:0,16:16:45.15:674,45,0	1/1:0,24:24:54.65:810,55,0	1/1:0,20:20:54.18:812,54,0	1/1:0,20:20:54.18:808,54,0	1/1:1,34:35:99:1469,102,0	1/1:0,30:30:81.27:1218,81,0	1/1:0,8:8:21.07:315,21,0
chr10	34643883	.	G	GACAGACAGAC	171.54	PASS	AB=0.863;AC=9;AF=0.167;AN=54;BaseQRankSum=-2.087;DP=711;FS=2.341;HRun=0;HaplotypeScore=269.1493;InbreedingCoeff=0.4062;MQ=58.56;MQ0=9;MQRankSum=0.377;QD=1.11;ReadPosRankSum=-4.187;VQSLOD=1.6887;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,108,2903	0/0:8,0:10:15.02:0,15,312	0/0:27,0:17:30.28:0,30,531	0/0:27,0:20:31.04:0,31,581	1/1:32,0:32:4.51:39,5,0	0/0:27,0:26:5.67:0,6,78	0/1:25,0:25:41.12:41,0,60	0/0:31,0:29:31.81:0,32,799	0/1:20,0:20:8.26:19,0,8	0/0:41,0:41:89.03:0,89,2074	0/0:24,0:24:8.59:0,9,102	1/1:3,16:25:3.01:119,3,0	0/0:24,0:26:42.02:0,42,811	0/0:18,0:18:8.95:0,9,90	0/0:25,0:25:24.05:0,24,477	0/0:28,0:28:31.33:0,31,601	1/1:22,0:22:0.60:71,1,0	0/0:12,0:12:5.91:0,6,55	0/0:23,0:23:41.66:0,42,685	0/0:31,0:31:20.84:0,21,231	0/0:23,0:23:21.02:0,21,257	0/0:24,0:25:12.51:0,13,163	./.	0/1:9,15:30:4.16:9,0,4	0/0:23,0:23:8.74:0,9,90	0/0:29,0:29:78.26:0,78,1749	0/0:25,0:26:39.02:0,39,643	0/0:9,0:10:12.04:0,12,251
chr10	34643885	.	C	CAGACAG	169.54	PASS	AB=1.000;AC=11;AF=0.204;AN=54;BaseQRankSum=1.393;DP=694;FS=11.097;HRun=0;HaplotypeScore=240.1993;InbreedingCoeff=0.2827;MQ=57.58;MQ0=9;MQRankSum=-2.549;QD=0.86;ReadPosRankSum=-5.529;VQSLOD=0.2209;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,104,2291	0/0:10,0:10:13.05:0,13,215	0/0:25,0:15:30.28:0,30,531	0/0:27,0:19:26.37:0,26,541	1/1:31,0:31:5.01:39,5,0	0/1:27,0:26:11.74:12,0,26	0/1:24,0:24:31.26:42,0,31	0/1:30,0:28:4.37:4,0,632	1/1:20,0:20:4.55:29,5,0	0/0:44,0:44:46.96:0,47,1342	0/0:24,0:24:5.55:0,6,84	0/1:22,0:21:16.94:93,0,17	0/0:25,0:26:39.08:0,39,598	0/0:18,0:18:4.83:0,5,53	0/0:25,0:25:24.05:0,24,366	0/0:26,0:26:16.61:0,17,469	1/1:21,0:21:12.30:87,12,0	0/0:12,0:12:1.09:0,1,36	0/1:22,0:21:2.73:3,0,411	0/0:31,0:31:13.18:0,13,194	0/0:24,0:23:20.87:0,21,274	0/0:25,0:25:12.36:0,12,162	./.	0/0:25,0:25:5.50:0,6,43	0/0:23,0:23:5.98:0,6,72	0/0:30,0:29:71.26:0,71,1249	0/0:27,0:27:17.13:0,17,469	0/0:10,0:10:12.03:0,12,182
chr10	34643899	.	CACACACACAG	C	4854.24	PASS	AB=0.988;AC=30;AF=0.536;AN=56;BaseQRankSum=9.779;DP=690;FS=0.510;HRun=0;HaplotypeScore=243.4633;InbreedingCoeff=0.1830;MQ=52.64;MQ0=12;MQRankSum=-4.659;QD=9.65;ReadPosRankSum=4.033;VQSLOD=3.3292;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,117,3878	0/1:10,0:10:14.68:41,0,15	0/0:9,0:4:2.70:0,3,71	0/0:17,0:11:26.90:0,27,442	0/1:35,0:35:0.14:1,0,0	0/1:29,0:28:32.56:48,0,33	0/0:24,0:24:4.65:0,5,67	0/1:31,0:29:53.01:384,0,53	0/1:21,0:21:9.25:9,0,13	1/1:48,1:49:98.44:1382,98,0	0/1:24,0:24:17.73:51,0,18	0/0:17,0:16:9.03:0,9,250	1/1:25,0:25:24.07:291,24,0	0/1:22,0:22:15.04:55,0,15	0/1:22,0:23:7.94:193,0,8	0/1:21,2:23:4.14:278,0,4	1/1:18,0:18:2.04:6,2,0	1/1:13,0:13:2.60:10,3,0	1/1:23,1:22:13.53:519,14,0	1/1:31,0:31:6.01:62,6,0	0/1:26,0:25:10.16:10,0,268	0/0:26,1:27:2.04:0,2,6	0/0:21,0:20:3.01:0,3,43	0/0:26,0:26:18.90:0,19,352	1/1:25,0:25:3.47:27,3,0	1/1:33,0:31:53.57:956,54,0	1/1:30,0:30:29.89:407,30,0	1/1:11,0:10:9:125,9,0
chr10	34643901	.	CACACACAG	C	8668.09	PASS	AB=0.769;AC=40;AF=0.714;AN=56;BaseQRankSum=7.671;DP=682;FS=1.879;HRun=0;HaplotypeScore=218.9970;InbreedingCoeff=0.5367;MQ=52.84;MQ0=12;MQRankSum=-3.964;QD=15.82;ReadPosRankSum=1.499;VQSLOD=4.1063;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,110,3033	1/1:10,0:10:14.48:132,14,0	0/0:6,0:3:3.01:0,3,50	0/0:18,0:11:16.52:0,17,250	0/1:37,0:37:0.09:0,0,0	1/1:28,1:28:8.81:96,9,0	0/1:25,0:25:10.04:10,0,38	1/1:6,0:28:34.29:818,34,0	1/1:22,0:22:3.01:32,3,0	1/1:4,44:48:99:2258,120,0	1/1:0,23:23:5.46:124,5,0	0/0:18,0:17:12.02:0,12,221	1/1:2,23:25:24.08:646,24,0	1/1:2,19:21:6.02:158,6,0	1/1:4,18:22:12.04:312,12,0	1/1:4,18:22:14.95:335,15,0	1/1:19,0:19:2.94:18,3,0	1/1:1,12:13:3.01:57,3,0	1/1:7,16:21:54.04:946,54,0	1/1:2,29:31:6.02:127,6,0	0/1:3,21:23:10:10,0,197	0/1:4,22:26:0.05:0,0,0	0/0:20,0:19:3.01:0,3,30	0/0:26,0:26:12.74:0,13,231	1/1:1,25:26:3.01:74,3,0	1/1:4,29:31:90.05:1689,90,0	1/1:3,26:29:29.96:658,30,0	1/1:2,8:9:9.03:167,9,0
chr10	34643903	.	CACACAG	C	5414.10	PASS	AB=0.723;AC=39;AF=0.696;AN=56;BaseQRankSum=9.172;DP=654;FS=0.000;HRun=0;HaplotypeScore=211.8489;InbreedingCoeff=0.4923;MQ=51.50;MQ0=10;MQRankSum=-4.614;QD=10.23;ReadPosRankSum=1.443;VQSLOD=3.8312;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:92.38:0,92,2273	1/1:9,0:9:14.88:172,15,0	0/0:2,0:1:3.01:0,3,31	0/0:16,0:9:0.51:0,1,107	0/1:4,34:38:0.32:0,0,0	1/1:6,21:26:8.94:138,9,0	0/1:4,20:24:18.43:30,0,18	1/1:29,0:27:44.01:470,44,0	1/1:0,21:21:3.01:71,3,0	1/1:46,0:46:99:1393,117,0	1/1:23,0:23:5.57:71,6,0	0/0:18,0:17:12.02:0,12,167	1/1:25,0:25:24.08:361,24,0	1/1:19,0:19:5.95:86,6,0	1/1:19,0:19:12.03:190,12,0	1/1:20,0:20:14.94:231,15,0	0/1:3,16:19:0:0,0,0	1/1:13,0:13:2.98:21,3,0	1/1:22,0:20:46.52:534,47,0	1/1:29,0:29:6.02:74,6,0	0/1:24,0:23:10.01:10,0,154	0/1:25,0:25:0.05:0,0,0	0/0:16,0:15:2.97:0,3,20	0/0:25,0:25:12.06:0,12,172	1/1:26,0:26:3.01:38,3,0	1/1:32,0:30:81.93:991,82,0	1/1:29,0:29:29.95:423,30,0	1/1:10,0:9:9.03:109,9,0
chr10	34643907	.	CAG	C	1968.49	PASS	AB=0.973;AC=36;AF=0.667;AN=54;BaseQRankSum=8.067;DP=659;FS=1.435;HRun=0;HaplotypeScore=204.2114;InbreedingCoeff=0.2927;MQ=51.50;MQ0=10;MQRankSum=-4.749;QD=3.84;ReadPosRankSum=2.627;VQSLOD=2.9974;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:46,4:50:17.16:17,0,791	1/1:10,0:10:4.34:25,4,0	0/0:3,0:2:2.96:0,3,19	0/0:14,0:7:3:0,3,25	0/0:37,0:38:0:0,0,0	1/1:23,0:24:5.98:56,6,0	0/0:22,0:23:2.99:0,3,24	1/1:32,0:30:25.28:250,25,0	1/1:21,0:21:2.99:23,3,0	1/1:46,0:46:79.53:598,80,0	1/1:23,0:23:2.12:8,2,0	0/1:20,0:19:8.67:9,0,90	1/1:25,0:25:22.27:136,22,0	1/1:19,0:19:5.41:31,5,0	1/1:19,0:19:11.76:78,12,0	1/1:20,0:20:11.62:92,12,0	0/0:18,0:18:2.96:0,3,22	1/1:13,0:13:1.25:3,1,0	1/1:22,0:20:33.75:228,34,0	1/1:29,0:29:2.68:11,3,0	0/1:24,0:23:9.86:10,0,81	0/0:25,0:25:0:0,0,0	0/0:15,0:14:5.96:0,6,44	0/1:26,1:27:26.68:27,0,90	1/1:26,0:26:2.60:10,3,0	1/1:32,0:30:50:339,50,0	1/1:29,0:29:23.59:163,24,0	./.
chr10	34643919	.	GAGAGAGAGAGAGAGAC	G	1226.88	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=5.179;DP=714;FS=17.892;HRun=0;HaplotypeScore=311.9738;InbreedingCoeff=0.0684;MQ=50.04;MQ0=14;MQRankSum=-5.196;QD=5.60;ReadPosRankSum=2.130;VQSLOD=0.8021;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,124,6563	1/1:0,9:9:8.87:384,9,0	0/0:15,0:7:21.03:0,21,737	0/0:20,0:5:12.04:0,12,525	0/0:42,0:42:15.08:0,15,466	0/0:32,0:31:36.09:0,36,1385	0/0:24,0:24:13.23:0,13,378	0/1:40,0:38:99:201,0,902	0/0:20,0:20:3.01:0,3,76	0/1:44,0:44:99:344,0,2059	0/0:25,0:25:14.74:0,15,491	0/0:25,0:24:36.12:0,36,1775	0/1:27,0:27:51.40:51,0,751	0/0:24,0:24:18.06:0,18,599	0/1:19,0:19:26.08:26,0,111	0/1:21,0:21:33.32:33,0,271	0/0:18,0:18:8.83:0,9,362	0/0:13,0:13:8.99:0,9,137	0/1:20,0:18:69.26:69,0,807	0/0:34,0:34:9.03:0,9,276	0/0:23,0:22:9.50:0,10,366	0/0:30,0:30:14.74:0,15,561	0/0:16,0:15:18.06:0,18,747	0/0:28,0:28:26.37:0,26,1421	0/0:27,0:27:8.99:0,9,277	0/1:31,0:29:99:240,0,1284	0/0:32,0:32:19.09:0,19,945	1/1:8,0:7:2.63:23,3,0
chr10	34644330	.	TATCTATCTATCTATC	T	7106.67	PASS	AB=0.967;AC=36;AF=0.720;AN=50;BaseQRankSum=-2.879;DP=595;FS=11.155;HRun=0;HaplotypeScore=226.6329;InbreedingCoeff=-0.2082;MQ=40.80;MQ0=22;MQRankSum=-0.637;QD=13.18;ReadPosRankSum=-0.442;VQSLOD=2.0712;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:37:8.74:0,9,1433	1/1:7,0:5:15.03:205,15,0	./.	./.	0/1:12,24:36:99:267,0,347	1/1:21,0:21:3.01:60,3,0	1/1:19,0:16:5.05:92,5,0	0/1:31,0:20:99:127,0,261	0/1:32,0:31:0:0,0,0	0/1:26,0:25:99:422,0,436	0/1:24,0:24:99:284,0,186	1/1:21,0:21:3.01:52,3,0	1/1:21,0:21:10.65:147,11,0	0/1:18,0:18:79.97:229,0,80	1/1:20,0:20:19.37:351,19,0	1/1:16,0:16:24.08:397,24,0	1/1:11,0:11:6.02:130,6,0	0/1:14,0:13:42.55:269,0,43	1/1:18,0:11:24.55:478,25,0	0/1:37,0:34:72.73:676,0,73	./.	0/1:23,0:23:63.19:396,0,63	1/1:26,0:26:11.80:172,12,0	0/1:6,0:6:12.77:30,0,13	0/1:30,0:30:50.12:715,0,50	0/1:31,0:27:99:550,0,154	1/1:32,0:29:10.10:758,10,0	1/1:18,0:16:24.09:300,24,0
chr10	34644345	.	C	CT	7071.35	PASS	AB=0.746;AC=41;AF=0.820;AN=50;BaseQRankSum=-0.043;DP=557;FS=15.527;HRun=1;HaplotypeScore=167.9501;InbreedingCoeff=0.1299;MQ=35.12;MQ0=21;MQRankSum=-0.728;QD=15.17;ReadPosRankSum=0.217;VQSLOD=3.4065;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:32:34.20:0,34,481	1/1:1,6:6:15.05:226,15,0	./.	./.	1/1:25,0:29:12.88:224,13,0	1/1:0,0:22:3.01:45,3,0	1/1:1,14:12:4.56:44,5,0	0/1:19,5:13:99:180,0,250	./.	0/1:8,14:22:57.95:634,0,58	1/1:4,15:21:20.41:294,20,0	1/1:0,0:16:3.01:44,3,0	1/1:2,22:24:15.96:255,16,0	1/1:2,14:17:12.93:176,13,0	1/1:2,15:17:19.37:263,19,0	1/1:5,14:18:26.54:365,27,0	1/1:1,8:8:6.02:93,6,0	0/1:6,8:13:17.95:274,0,18	1/1:1,9:9:27.09:398,27,0	1/1:11,25:34:38.83:585,39,0	0/0:2,3:5:0.47:0,0,1	1/1:4,16:20:32.71:412,33,0	1/1:1,23:25:12.02:174,12,0	0/1:4,0:4:10.22:30,0,10	1/1:3,28:31:43.17:650,43,0	0/1:11,16:23:23.79:667,0,24	1/1:10,25:31:15.48:637,15,0	1/1:7,10:12:27.09:403,27,0
chr10	34644424	.	CT	C	1014.88	PASS	AB=0.737;AC=17;AF=0.472;AN=36;BaseQRankSum=-1.910;DP=296;FS=8.757;HRun=1;HaplotypeScore=60.5626;InbreedingCoeff=0.0395;MQ=26.44;MQ0=31;MQRankSum=-0.414;QD=7.25;ReadPosRankSum=-0.030;VQSLOD=-0.0300;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:16:0.94:3,1,0	1/1:0,3:3:3.01:42,3,0	0/0:9,0:2:2.98:0,3,22	./.	./.	0/0:16,0:15:3.01:0,3,46	./.	0/1:16,2:9:78.43:78,0,119	0/0:18,0:17:6.24:0,6,92	0/1:7,10:12:14.45:386,0,14	0/1:3,9:10:0:0,0,0	0/1:7,0:5:0.04:0,0,0	1/1:1,7:7:2.97:20,3,0	./.	./.	0/0:1,13:12:3.10:0,3,15	0/1:6,0:3:0.01:0,0,0	0/1:6,2:6:5.43:5,0,133	0/1:1,5:6:23.95:191,0,24	./.	./.	0/1:2,6:6:0:0,0,0	./.	./.	./.	0/1:4,7:9:19.77:269,0,20	1/1:5,8:9:8.92:125,9,0	0/0:6,1:5:5.38:0,5,52
chr10	34644464	.	C	CT	436.53	PASS	AB=0.901;AC=19;AF=0.500;AN=38;BaseQRankSum=1.813;DP=196;FS=0.000;HRun=1;HaplotypeScore=29.7150;InbreedingCoeff=0.1267;MQ=20.83;MQ0=34;MQRankSum=0.038;QD=4.28;ReadPosRankSum=0.831;VQSLOD=0.2372;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:16,2:15:21.91:39,0,22	0/0:1,1:2:0.47:0,0,1	0/0:47,0:5:15.05:0,15,190	0/1:29,0:2:9.37:9,0,36	0/0:6,0:4:0:0,0,0	./.	./.	0/1:8,4:9:67.41:159,0,67	1/1:9,0:8:3.64:45,4,0	0/0:5,0:2:3.01:0,3,42	1/1:4,0:2:1.25:3,1,0	1/1:2,1:2:3.01:38,3,0	./.	./.	./.	./.	0/1:6,0:3:0:0,0,0	1/1:2,2:4:12.03:162,12,0	0/1:3,1:2:25.11:38,0,25	./.	1/1:0,3:3:0.47:1,0,0	0/1:2,0:2:0.02:0,0,0	./.	0/1:5,1:5:0:0,0,0	./.	0/0:3,1:1:3.01:0,3,41	1/1:1,1:1:3.01:48,3,0	0/0:3,0:1:3.01:0,3,38
chr10	34644490	.	C	CCTAT	1393.85	PASS	AB=0.951;AC=36;AF=0.783;AN=46;BaseQRankSum=2.769;DP=280;FS=6.833;HRun=0;HaplotypeScore=112.8509;InbreedingCoeff=0.1807;MQ=30.54;MQ0=28;MQRankSum=1.404;QD=6.57;ReadPosRankSum=-3.199;VQSLOD=1.1770;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:8,15:20:19.58:137,0,20	1/1:9,0:8:14.71:125,15,0	./.	./.	0/1:8,0:8:0.15:1,0,0	1/1:12,0:12:5.85:49,6,0	0/1:6,0:2:0:0,0,0	0/0:14,0:10:15.01:0,15,183	1/1:12,0:12:5.99:50,6,0	1/1:6,0:3:5.89:39,6,0	0/1:10,0:8:0.15:0,0,0	1/1:7,0:7:9.07:73,9,0	./.	1/1:7,0:7:11.68:94,12,0	1/1:13,0:12:20.28:142,20,0	1/1:14,0:12:26.79:254,27,0	1/1:7,0:4:2.94:18,3,0	0/1:3,0:3:14.97:15,0,30	0/1:6,0:4:11:11,0,71	1/1:14,0:14:5.67:30,6,0	./.	0/1:11,0:11:0.14:0,0,0	1/1:9,0:7:2.47:24,2,0	1/1:9,0:8:2.99:24,3,0	1/1:11,0:9:8.98:97,9,0	1/1:11,0:10:26.90:274,27,0	0/1:4,0:3:5.21:54,0,5	./.
chr10	34644511	.	G	GTATCTATC	7155.56	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=1.652;DP=391;FS=13.015;HRun=0;HaplotypeScore=164.4907;InbreedingCoeff=0.5294;MQ=45.18;MQ0=19;MQRankSum=-0.860;QD=21.88;ReadPosRankSum=0.590;VQSLOD=3.5194;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:27:4.48:0,4,247	1/1:10,1:10:15.04:334,15,0	0/0:20,0:7:18.44:0,18,167	0/0:14,0:4:2.18:0,2,47	1/1:15,0:15:1.11:22,1,0	1/1:19,0:19:16.92:172,17,0	1/1:9,0:7:2.69:25,3,0	1/1:20,0:18:36.04:435,36,0	1/1:20,0:19:14.99:149,15,0	1/1:8,0:6:18.06:339,18,0	1/1:15,0:14:17.33:236,17,0	1/1:9,0:9:12.51:125,13,0	1/1:4,0:4:5.95:67,6,0	1/1:9,2:11:24.04:448,24,0	1/1:18,2:19:33.11:675,33,0	1/1:16,1:15:33.10:793,33,0	1/1:10,0:7:4.87:59,5,0	1/1:8,0:8:12.02:177,12,0	1/1:13,0:13:26.92:312,27,0	1/1:23,2:25:35.88:408,36,0	1/1:8,0:8:6.01:75,6,0	1/1:13,2:15:5.38:58,5,0	1/1:11,0:10:3.52:45,4,0	1/1:10,0:9:5.42:47,5,0	1/1:16,0:14:27.02:473,27,0	1/1:17,0:17:51.14:1086,51,0	1/1:12,0:12:30.03:454,30,0	1/1:4,0:3:9.03:142,9,0
chr10	34644541	.	T	TG	9268.84	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-2.857;DP=560;FS=48.798;HRun=6;HaplotypeScore=159.2601;InbreedingCoeff=0.9900;MQ=64.57;MQ0=3;MQRankSum=-4.790;QD=27.26;ReadPosRankSum=0.125;VQSLOD=0.4958;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:30.05:0,30,299	1/1:0,13:13:32.13:383,32,0	0/0:25,0:20:46.89:0,47,458	0/0:16,0:12:34.89:0,35,340	0/0:33,0:33:77.66:0,78,794	0/0:27,0:27:56.67:0,57,581	0/0:12,0:11:21.05:0,21,214	1/1:2,27:28:75.18:901,75,0	0/0:30,0:29:39.07:0,39,398	1/1:0,18:18:51.16:642,51,0	1/1:2,26:28:57.18:717,57,0	0/0:18,0:18:36.07:0,36,367	1/1:0,7:7:18.06:226,18,0	1/1:0,15:15:37.79:440,38,0	1/1:0,28:28:58.20:673,58,0	1/1:0,18:18:42.09:510,42,0	0/0:9,0:10:14.05:0,14,128	1/1:2,10:12:30.10:377,30,0	1/1:2,12:14:39.11:478,39,0	1/1:0,32:32:58.77:720,59,0	1/1:1,19:20:27.09:339,27,0	1/1:0,25:25:24.08:299,24,0	0/0:18,0:18:38.96:0,39,388	0/0:9,0:9:12.02:0,12,122	1/1:1,21:22:51.12:624,51,0	1/1:2,28:30:84.25:1034,84,0	1/1:1,18:19:48.15:604,48,0	1/1:4,6:10:24.08:301,24,0
chr10	34644866	.	CAACT	C	12187.82	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=10.351;DP=455;FS=6.338;HRun=0;HaplotypeScore=82.7131;InbreedingCoeff=0.9866;MQ=73.83;MQ0=1;MQRankSum=-3.211;QD=42.17;ReadPosRankSum=0.519;VQSLOD=4.9938;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,102,2524	1/1:0,10:10:24.08:441,24,0	0/0:14,0:14:36.12:0,36,858	0/0:5,0:5:15.05:0,15,348	0/0:30,0:29:84.29:0,84,2218	0/0:14,0:14:36.11:0,36,896	0/0:8,0:8:24.07:0,24,572	1/1:6,26:31:78.22:1304,78,0	0/0:13,0:13:39.13:0,39,1000	1/1:1,20:21:60.18:1045,60,0	1/1:3,13:16:27.09:496,27,0	0/0:12,0:12:36.11:0,36,880	1/1:2,8:10:21.07:374,21,0	1/1:4,8:12:24.08:428,24,0	1/1:0,16:15:33.11:607,33,0	1/1:1,14:15:36.12:662,36,0	0/0:17,0:17:48.16:0,48,1267	1/1:0,12:12:24.08:441,24,0	1/1:2,22:24:66.16:1116,66,0	1/1:1,28:29:75.19:1335,75,0	1/1:2,15:17:39.13:717,39,0	1/1:0,13:13:33.11:603,33,0	0/0:9,0:9:21.07:0,21,554	0/0:9,0:9:27.09:0,27,712	1/1:2,12:14:33.11:607,33,0	1/1:1,16:17:48.14:797,48,0	1/1:1,21:22:57.20:1049,57,0	1/1:0,9:9:9.03:166,9,0
chr10	34645802	.	TACAAAGAG	T	815.17	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.820;DP=609;FS=6.304;HRun=0;HaplotypeScore=198.6403;InbreedingCoeff=0.9991;MQ=67.02;MQ0=0;MQRankSum=-5.564;QD=67.93;ReadPosRankSum=0.473;VQSLOD=2.8307;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,148,6451	1/1:1,11:12:33.11:910,33,0	0/0:17,0:16:45.15:0,45,1748	0/0:26,0:25:72.24:0,72,3011	0/0:21,0:21:63.22:0,63,2836	0/0:25,0:25:72.25:0,72,3178	0/0:20,0:20:57.20:0,57,2583	0/0:24,0:24:69.24:0,69,3067	0/0:20,0:20:60.21:0,60,2713	0/0:15,0:15:45.15:0,45,1908	0/0:13,0:13:36.12:0,36,1532	0/0:13,0:13:33.11:0,33,1495	0/0:27,0:27:81.26:0,81,3462	0/0:21,0:21:60.12:0,60,2634	0/0:33,0:33:96.33:0,96,4309	0/0:22,0:22:63.22:0,63,2806	0/0:40,0:40:99:0,114,4972	0/0:18,0:18:54.19:0,54,2445	0/0:16,0:16:45.15:0,45,2010	0/0:23,0:23:69.24:0,69,3018	0/0:19,0:19:51.18:0,51,2257	0/0:24,0:24:72.23:0,72,3152	0/0:13,0:13:36.12:0,36,1600	0/0:23,0:23:66.23:0,66,2941	0/0:16,0:16:48.16:0,48,2175	0/0:24,0:24:72.25:0,72,3083	0/0:22,0:22:63.22:0,63,2738	0/0:12,0:12:36.12:0,36,1631
chr10	34645837	.	G	GA	17785.33	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=2.775;DP=629;FS=1.486;HRun=5;HaplotypeScore=90.8167;InbreedingCoeff=0.9996;MQ=61.78;MQ0=3;MQRankSum=0.747;QD=33.81;ReadPosRankSum=4.376;VQSLOD=4.6723;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,123,1321	1/1:2,13:15:39.13:513,39,0	0/0:27,0:19:42.10:0,42,449	0/0:29,0:26:50.95:0,51,601	1/1:0,16:16:48.16:631,48,0	1/1:4,24:28:63.20:829,63,0	1/1:0,20:20:60.20:790,60,0	1/1:4,28:32:81.24:1049,81,0	1/1:2,19:21:51.17:671,51,0	1/1:0,21:21:60.20:789,60,0	1/1:1,13:14:39.13:513,39,0	1/1:1,15:16:36.12:474,36,0	1/1:3,13:16:39.13:512,39,0	1/1:2,20:22:54.18:711,54,0	1/1:3,29:32:81.26:1066,81,0	1/1:0,24:24:66.21:868,66,0	1/1:1,26:27:46.47:955,46,0	1/1:3,15:18:42.14:553,42,0	1/1:1,16:17:42.12:537,42,0	1/1:2,23:25:69.18:888,69,0	1/1:1,17:18:45.15:592,45,0	1/1:4,20:24:60.19:780,60,0	1/1:1,11:12:30.10:395,30,0	1/1:3,27:30:75.24:987,75,0	1/1:0,17:17:51.17:671,51,0	1/1:2,15:17:42.14:552,42,0	1/1:4,15:19:36.10:474,36,0	1/1:0,25:25:75.24:987,75,0
chr10	34646242	.	CT	C	23422.41	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=4.356;DP=702;FS=0.382;HRun=1;HaplotypeScore=92.8487;InbreedingCoeff=0.9987;MQ=93.92;MQ0=0;MQRankSum=-9.243;QD=39.70;ReadPosRankSum=5.805;VQSLOD=4.8028;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,132,2094	1/1:0,9:9:27.09:378,27,0	0/0:41,0:41:99:0,117,1743	0/0:27,0:25:66.08:0,66,865	1/1:0,29:29:78.26:1091,78,0	1/1:0,19:19:57.19:797,57,0	1/1:1,29:30:84.28:1174,84,0	1/1:0,22:22:66.21:905,66,0	1/1:0,32:32:90.30:1259,90,0	1/1:0,34:34:99:1403,102,0	1/1:0,23:23:69.23:965,69,0	1/1:0,18:18:54.18:755,54,0	1/1:0,20:20:54.18:753,54,0	1/1:0,19:19:54.18:755,54,0	1/1:0,28:28:69.23:965,69,0	1/1:0,24:24:66.22:923,66,0	1/1:0,28:28:72.24:1007,72,0	1/1:0,12:12:36.12:504,36,0	1/1:0,10:10:30.10:420,30,0	1/1:0,26:26:78.26:1090,78,0	1/1:0,36:36:99:1469,105,0	1/1:0,36:36:99:1507,108,0	1/1:0,24:24:63.21:881,63,0	1/1:0,20:20:54.18:755,54,0	1/1:0,21:21:60.20:838,60,0	1/1:0,25:25:75.23:1026,75,0	1/1:0,37:37:99:1468,105,0	1/1:0,8:8:24.08:335,24,0
chr10	34646455	.	G	GA	19348.47	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=9.417;DP=565;FS=13.713;HRun=0;HaplotypeScore=123.8330;InbreedingCoeff=0.9461;MQ=77.50;MQ0=0;MQRankSum=-5.328;QD=38.16;ReadPosRankSum=2.959;VQSLOD=3.1731;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:99:0,99,1378	1/1:0,7:7:21.07:296,21,0	0/0:11,0:11:30.09:0,30,404	0/0:14,0:14:28.98:0,29,379	1/1:0,30:30:87.29:1226,87,0	1/1:1,21:22:54.18:773,54,0	1/1:0,21:21:57.19:793,57,0	1/1:4,26:30:81.65:1129,82,0	1/1:0,30:30:78.26:1108,78,0	1/1:1,28:29:84.22:1175,84,0	1/1:0,11:11:30.10:421,30,0	1/1:1,11:12:33.08:461,33,0	1/1:0,22:22:54.18:761,54,0	1/1:0,18:18:48.16:682,48,0	1/1:0,23:23:63.21:884,63,0	1/1:1,19:20:57.17:809,57,0	1/1:2,21:23:66.20:928,66,0	1/1:1,3:4:4.91:85,5,0	1/1:3,21:24:63.15:856,63,0	1/1:0,30:30:90.30:1265,90,0	1/1:1,8:9:18.06:253,18,0	1/1:1,24:25:63.21:888,63,0	1/1:0,22:22:63.14:894,63,0	1/1:3,19:22:56.66:747,57,0	1/1:2,14:15:41.72:588,42,0	1/1:0,23:23:66.21:932,66,0	1/1:1,28:29:84.25:1184,84,0	1/1:0,5:5:15.05:210,15,0
chr10	34646741	.	GT	G	10531.28	PASS	AB=0.909;AC=51;AF=0.911;AN=56;BaseQRankSum=-2.748;DP=546;FS=5.058;HRun=10;HaplotypeScore=56.4488;InbreedingCoeff=0.6862;MQ=68.22;MQ0=0;MQRankSum=-1.085;QD=20.29;ReadPosRankSum=1.777;VQSLOD=5.9776;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:15:38.87:0,39,386	1/1:2,6:8:17.98:156,18,0	0/0:12,0:11:5.58:0,6,191	0/1:9,1:10:16.53:17,0,94	1/1:3,37:40:99:885,102,0	1/1:1,9:10:20.99:182,21,0	1/1:2,10:12:14.99:130,15,0	1/1:11,18:29:50.95:439,51,0	1/1:3,18:21:53.99:469,54,0	1/1:8,25:33:51.95:614,52,0	1/1:1,16:17:38.97:339,39,0	1/1:1,20:21:53.99:469,54,0	1/1:3,14:17:38.99:338,39,0	1/1:0,15:15:41.99:365,42,0	1/1:1,20:21:56.98:495,57,0	1/1:3,19:22:56.97:495,57,0	1/1:2,16:18:44.99:390,45,0	1/1:1,10:11:26.99:234,27,0	1/1:4,15:19:44.36:372,44,0	1/1:4,39:43:99:955,111,0	1/1:1,10:11:6.30:188,6,0	1/1:0,16:16:38.99:339,39,0	1/1:1,18:19:47.98:417,48,0	1/1:0,15:15:41.99:365,42,0	1/1:2,13:15:35.57:312,36,0	1/1:6,27:33:77.94:672,78,0	1/1:2,19:21:47.86:405,48,0	1/1:1,21:22:56.97:490,57,0
chr10	34647722	.	AAC	A	161.39	PASS	AB=0.750;AC=7;AF=0.389;AN=18;BaseQRankSum=1.977;DP=111;FS=9.549;HRun=0;HaplotypeScore=28.7196;MQ=53.71;MQ0=18;MQRankSum=-1.553;QD=16.14;ReadPosRankSum=2.594;VQSLOD=1.8598;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,3:35:49.23:0,49,1593	./.	0/0:15,0:8:21.07:0,21,371	0/0:14,0:8:24.08:0,24,436	./.	./.	./.	0/0:20,0:17:51.14:0,51,598	./.	0/1:2,1:2:38.16:38,0,39	./.	1/1:1,1:2:6.02:88,6,0	./.	1/1:1,2:3:6.02:88,6,0	./.	./.	./.	1/1:1,1:1:3.01:44,3,0	./.	./.	./.	./.	./.	./.	./.	0/0:1,0:1:3.01:0,3,56	./.	./.
chr10	34649550	.	A	AG	216.13	PASS	AC=4;AF=0.67;AN=6;BaseQRankSum=0.747;DP=516;FS=0.000;HRun=0;HaplotypeScore=8.5454;MQ=4.21;MQ0=480;MQRankSum=-0.747;QD=6.55;ReadPosRankSum=-0.747;VQSLOD=2.6698;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:63,0:1:3.01:0,3,41	./.	./.	./.	./.	./.	./.	./.	./.	1/1:11,5:5:15.04:201,15,0	1/1:15,2:2:6.02:87,6,0	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.
chr10	34650060	.	T	TA	117.85	PASS	AC=6;AF=0.375;AN=16;BaseQRankSum=2.243;DP=98;FS=12.854;HRun=3;HaplotypeScore=25.5939;MQ=78.76;MQ0=9;MQRankSum=-3.512;QD=23.57;ReadPosRankSum=2.186;VQSLOD=1.6476;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:36.11:0,36,431	./.	0/0:21,0:7:18.06:0,18,216	0/0:19,0:6:16.84:0,17,168	0/0:1,0:1:3.01:0,3,36	./.	./.	0/0:27,0:27:81.23:0,81,960	./.	1/1:0,3:3:9.03:126,9,0	1/1:0,1:1:3.01:42,3,0	./.	./.	./.	./.	./.	./.	./.	./.	1/1:0,1:1:3.01:42,3,0	./.	./.	./.	./.	./.	./.	./.	./.
chr10	34650965	.	TG	T	241.60	PASS	AC=2;AF=0.50;AN=4;BaseQRankSum=-0.715;DP=294;FS=0.000;HRun=2;HaplotypeScore=23.0067;MQ=8.75;MQ0=272;MQRankSum=-0.978;QD=7.11;ReadPosRankSum=2.262;VQSLOD=0.8744;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:8:8.96:0,9,108	./.	./.	./.	./.	./.	./.	1/1:15,19:10:24.08:311,24,0	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.
chr10	34651252	.	GGTAGAGCGCTTACCTAGGAA	G	2156.43	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=5.774;DP=253;FS=38.308;HRun=0;HaplotypeScore=131.9405;InbreedingCoeff=0.7768;MQ=43.93;MQ0=5;MQRankSum=-5.798;QD=82.94;ReadPosRankSum=0.637;VQSLOD=1.7007;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:66.23:0,66,5750	0/0:2,0:2:6.02:0,6,582	0/0:6,0:4:7.84:0,8,197	0/0:7,0:5:8.98:0,9,173	1/1:3,2:4:5.99:101,6,0	1/1:0,2:2:6.02:340,6,0	1/1:4,4:4:12.04:679,12,0	0/0:12,0:12:33.11:0,33,2282	1/1:0,2:2:6.02:339,6,0	0/0:8,0:8:24.08:0,24,2272	0/0:10,0:9:15.05:0,15,1262	0/0:6,0:6:9.03:0,9,872	0/0:4,0:4:9.03:0,9,739	0/0:8,0:8:21.07:0,21,1732	0/0:15,0:15:36.12:0,36,3217	0/0:14,0:14:39.13:0,39,3584	1/1:3,6:9:15.05:848,15,0	0/0:3,0:3:3.01:0,3,279	0/0:8,0:6:18.06:0,18,1613	0/0:11,0:11:27.05:0,27,1590	0/0:11,0:10:24.08:0,24,2037	0/0:7,0:7:18.06:0,18,1542	0/0:9,0:9:18.06:0,18,1745	0/0:15,0:15:39.13:0,39,3778	0/0:11,0:11:27.09:0,27,2417	0/0:12,0:12:33.11:0,33,3071	0/0:15,0:15:42.62:0,43,3568	0/0:8,0:8:9.03:0,9,577
chr10	34651301	.	T	TCC	1713.08	PASS	AB=0.982;AC=40;AF=0.833;AN=48;BaseQRankSum=4.446;DP=263;FS=12.139;HRun=9;HaplotypeScore=66.8502;InbreedingCoeff=0.4954;MQ=40.78;MQ0=14;MQRankSum=-4.176;QD=9.31;ReadPosRankSum=0.139;VQSLOD=0.0662;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:66.14:0,66,694	./.	0/0:31,1:5:8.56:0,9,84	0/1:24,0:3:1.03:1,0,27	1/1:5,0:5:3:25,3,0	1/1:10,2:11:12.83:103,13,0	1/1:12,1:9:10.69:88,11,0	1/1:7,3:11:18.03:216,18,0	1/1:1,0:1:2.94:18,3,0	1/1:5,1:6:6:56,6,0	1/1:8,3:10:5.98:63,6,0	1/1:5,0:5:4.72:16,5,0	./.	1/1:3,2:5:8.51:81,9,0	1/1:3,2:5:6:57,6,0	1/1:2,5:7:18.04:204,18,0	1/1:7,1:8:13.07:85,13,0	./.	1/1:6,5:9:23.01:231,23,0	0/1:3,0:3:0:0,0,0	./.	1/1:4,3:7:12.04:160,12,0	0/0:6,0:6:0.46:0,0,1	1/1:14,0:13:7.34:46,7,0	1/1:5,3:8:11.98:104,12,0	1/1:2,4:6:15:170,15,0	1/1:7,3:8:5.99:67,6,0	1/1:0,6:6:3.01:46,3,0
chr10	34651316	.	AAC	A	1333.15	PASS	AC=48;AF=0.889;AN=54;BaseQRankSum=6.752;DP=264;FS=57.831;HRun=0;HaplotypeScore=63.4449;InbreedingCoeff=0.5067;MQ=40.08;MQ0=12;MQRankSum=-6.133;QD=8.28;ReadPosRankSum=-2.103;VQSLOD=0.4667;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:93.08:0,93,1496	./.	0/0:36,0:6:13.58:0,14,149	0/0:30,0:6:12.29:0,12,127	1/1:6,0:5:4.83:18,5,0	1/1:10,1:10:20.34:145,20,0	1/1:6,3:8:16.88:139,17,0	1/1:7,0:6:14.27:85,14,0	1/1:1,0:1:2.84:14,3,0	1/1:2,0:2:5.65:28,6,0	1/1:10,0:10:3.14:37,3,0	1/1:6,2:8:12.01:122,12,0	1/1:3,0:2:2.84:14,3,0	1/1:5,0:5:3.51:35,4,0	1/1:6,1:6:8.90:59,9,0	1/1:7,0:7:11.54:45,12,0	1/1:6,1:7:16.63:126,17,0	1/1:6,0:6:5.27:21,5,0	1/1:12,0:11:26.23:133,26,0	1/1:5,1:4:5.88:56,6,0	1/1:3,0:3:2.97:20,3,0	1/1:6,0:6:8.72:28,9,0	1/1:8,1:9:8.48:46,8,0	1/1:11,3:12:21.40:192,21,0	1/1:3,0:3:1.15:10,1,0	1/1:7,0:6:15.32:63,15,0	1/1:8,0:7:6.96:26,7,0	1/1:4,0:4:2.37:8,2,0
chr10	34651317	.	AC	A	1733.37	PASS	AC=48;AF=0.889;AN=54;BaseQRankSum=7.972;DP=270;FS=37.575;HRun=1;HaplotypeScore=64.3025;InbreedingCoeff=0.5956;MQ=40.43;MQ0=12;MQRankSum=-6.728;QD=10.44;ReadPosRankSum=-1.551;VQSLOD=-0.6548;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:95.82:0,96,1233	./.	0/0:35,0:6:14.59:0,15,140	0/0:30,0:6:11.89:0,12,102	1/1:5,1:5:4.87:17,5,0	1/1:9,3:11:19.23:146,19,0	1/1:9,1:9:16.69:110,17,0	1/1:7,0:6:11.42:76,11,0	1/1:2,0:2:2.69:8,3,0	1/1:1,1:2:5.89:38,6,0	1/1:5,4:9:8.78:55,9,0	1/1:7,2:9:11.05:107,11,0	1/1:1,2:2:3:25,3,0	1/1:4,1:5:12.40:76,12,0	1/1:5,2:6:8.97:80,9,0	1/1:2,4:6:14.88:118,15,0	1/1:8,0:8:19.12:106,19,0	1/1:3,3:6:5.65:32,6,0	1/1:5,6:10:25.75:201,26,0	1/1:5,2:5:8.98:74,9,0	1/1:3,1:4:4.52:24,5,0	1/1:4,3:7:8.29:58,8,0	1/1:7,2:9:8.51:44,9,0	1/1:10,5:14:23.43:211,23,0	1/1:0,3:3:8.74:57,9,0	1/1:4,2:5:14.58:105,15,0	1/1:3,5:7:11.79:95,12,0	1/1:4,0:4:2.80:13,3,0
chr10	34651320	.	AACAAACAAAC	A	4091.99	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=4.930;DP=299;FS=35.826;HRun=0;HaplotypeScore=93.6103;InbreedingCoeff=0.5990;MQ=40.20;MQ0=9;MQRankSum=-6.989;QD=20.46;ReadPosRankSum=-2.850;VQSLOD=0.3467;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,105,3640	1/1:1,0:1:0.47:1,0,0	0/0:32,0:6:7.82:0,8,170	0/0:26,0:6:15.45:0,15,376	1/1:8,0:7:9.03:123,9,0	1/1:13,0:12:8.81:320,9,0	1/1:11,0:10:2.76:286,3,0	1/1:10,0:9:23.86:387,24,0	1/1:3,0:3:4.83:19,5,0	1/1:4,0:4:12:169,12,0	1/1:11,0:11:6.57:74,7,0	1/1:11,0:11:12.29:214,12,0	1/1:5,0:4:6.02:74,6,0	1/1:7,0:7:11.44:162,11,0	1/1:8,0:7:9.10:92,9,0	1/1:8,0:8:19.33:212,19,0	1/1:9,0:9:20.05:172,20,0	1/1:8,0:8:9.02:142,9,0	1/1:13,0:12:28:336,28,0	1/1:7,0:5:9.01:140,9,0	1/1:5,0:5:4.78:44,5,0	1/1:7,0:7:8.71:128,9,0	1/1:3,7:10:9.01:113,9,0	1/1:16,0:14:33.96:400,34,0	1/1:6,0:6:17.08:146,17,0	1/1:7,0:6:15.01:182,15,0	1/1:9,0:8:12.59:110,13,0	1/1:3,0:3:3.01:46,3,0
chr10	34651324	.	AACAAAC	A	5867.25	PASS	AB=1.000;AC=49;AF=0.875;AN=56;BaseQRankSum=4.351;DP=340;FS=30.049;HRun=0;HaplotypeScore=85.5656;InbreedingCoeff=0.6067;MQ=41.22;MQ0=8;MQRankSum=-5.586;QD=24.35;ReadPosRankSum=-4.620;VQSLOD=2.1373;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:79.74:0,80,2185	0/1:4,0:4:14.63:19,0,15	0/0:29,0:5:1.87:0,2,79	0/0:23,0:6:12.48:0,12,209	1/1:3,7:9:12:167,12,0	1/1:11,3:13:23.56:312,24,0	1/1:11,2:13:25.95:412,26,0	1/1:17,0:16:44.54:515,45,0	1/1:4,0:4:8.72:64,9,0	1/1:4,0:4:12:163,12,0	1/1:13,0:13:14.96:153,15,0	1/1:9,2:11:17.07:232,17,0	1/1:5,1:5:8.90:116,9,0	1/1:9,0:9:21.06:308,21,0	1/1:7,0:6:12.04:184,12,0	1/1:7,2:9:24.06:333,24,0	1/1:9,0:10:23.53:215,24,0	1/1:1,8:9:9.03:162,9,0	1/1:16,1:16:47.75:563,48,0	1/1:8,3:9:20.35:281,20,0	1/1:5,0:5:8.87:62,9,0	1/1:8,3:11:22.28:282,22,0	1/1:9,1:10:9:109,9,0	1/1:15,3:16:37.53:406,38,0	1/1:9,1:10:26.93:303,27,0	1/1:7,1:7:21.06:318,21,0	1/1:9,0:8:13:158,13,0	1/1:2,0:2:3:29,3,0
chr10	34651328	.	AAC	A	4104.79	PASS	AB=1.000;AC=49;AF=0.875;AN=56;BaseQRankSum=4.212;DP=353;FS=18.740;HRun=0;HaplotypeScore=72.6479;InbreedingCoeff=0.5582;MQ=44.59;MQ0=8;MQRankSum=-4.599;QD=15.97;ReadPosRankSum=-5.265;VQSLOD=0.9589;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:41.23:0,41,768	0/1:4,0:4:17.69:18,0,26	0/0:26,0:4:5.89:0,6,68	0/0:24,0:7:0.20:0,0,75	1/1:10,0:9:11.84:98,12,0	1/1:12,1:12:21.64:170,22,0	1/1:10,3:13:26.79:270,27,0	1/1:7,12:18:47.20:471,47,0	1/1:4,0:4:8.46:43,8,0	1/1:2,4:6:12.02:147,12,0	1/1:6,8:14:14.73:131,15,0	1/1:7,4:11:15.24:132,15,0	1/1:5,1:5:8.82:91,9,0	1/1:7,3:10:18.37:179,18,0	1/1:7,1:7:11.93:112,12,0	1/1:5,4:9:19.58:197,20,0	1/1:7,1:8:17.06:134,17,0	1/1:9,0:9:9.01:100,9,0	1/1:12,6:17:46.94:422,47,0	1/1:7,5:10:20.34:210,20,0	1/1:7,1:8:9.76:49,10,0	1/1:8,3:11:19.75:180,20,0	1/1:10,0:10:7.95:57,8,0	1/1:15,3:15:34.55:266,35,0	1/1:6,5:11:23.68:202,24,0	1/1:3,8:10:29.94:296,30,0	1/1:7,4:10:10.58:94,11,0	1/1:3,0:3:5.59:35,6,0
chr10	34651330	.	C	CA	1948.97	PASS	AB=1.000;AC=52;AF=0.929;AN=56;BaseQRankSum=-2.968;DP=352;FS=10.785;HRun=11;HaplotypeScore=74.2569;InbreedingCoeff=0.2308;MQ=47.07;MQ0=7;MQRankSum=0.864;QD=5.96;ReadPosRankSum=-2.834;VQSLOD=0.4112;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:12,35:48:24.20:766,24,0	0/1:4,0:4:21.44:21,0,31	0/0:25,0:4:2.99:0,3,23	0/1:23,0:8:2.39:2,0,27	1/1:9,0:9:6.45:35,6,0	1/1:11,1:11:9.22:53,9,0	1/1:12,0:12:12.31:65,12,0	1/1:17,1:16:30.19:161,30,0	1/1:4,0:4:2.43:19,2,0	1/1:6,0:6:14.15:77,14,0	1/1:13,0:14:10.43:49,10,0	1/1:10,1:11:3.04:14,3,0	1/1:7,0:6:7.54:39,8,0	1/1:11,0:12:13.65:58,14,0	1/1:8,0:7:2.48:14,2,0	1/1:9,0:9:13.05:57,13,0	1/1:6,1:7:11.42:71,11,0	1/1:8,0:9:4.47:19,4,0	1/1:18,0:17:13.66:72,14,0	1/1:11,0:10:14.90:111,15,0	1/1:7,1:8:4.78:33,5,0	1/1:11,0:11:9.74:36,10,0	1/1:11,0:11:5.18:27,5,0	1/1:18,0:15:11.17:54,11,0	1/1:10,1:11:12.24:65,12,0	1/1:10,0:10:18.99:89,19,0	1/1:11,0:10:9.25:49,9,0	1/1:2,0:2:0.89:2,1,0
chr10	34653201	.	G	GTGTA	2902.36	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=4.009;DP=709;FS=12.729;HRun=0;HaplotypeScore=131.4735;InbreedingCoeff=-0.0357;MQ=55.90;MQ0=15;MQRankSum=1.713;QD=7.27;ReadPosRankSum=5.575;VQSLOD=1.6881;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:31.55:0,32,251	0/1:8,0:7:28.77:29,0,37	0/0:47,0:19:46.40:0,46,415	0/0:48,0:18:51.04:0,51,508	1/1:4,14:17:7.58:165,8,0	1/1:11,17:31:23.65:490,24,0	1/1:5,14:19:18.22:400,18,0	0/0:32,0:31:74.68:0,75,631	1/1:9,2:25:1.25:499,1,0	0/1:27,0:27:40.97:41,0,291	0/0:24,0:24:6.51:0,7,276	0/1:26,0:26:15.80:16,0,361	0/1:15,0:15:68.42:68,0,136	0/0:20,0:20:25.86:0,26,198	0/1:32,0:32:88.17:88,0,281	0/1:31,0:31:99:249,0,173	1/1:8,21:30:25.29:517,25,0	0/1:12,0:12:73.88:124,0,74	0/1:21,0:18:30.29:30,0,265	0/1:15,0:15:99:116,0,117	0/0:57,0:55:6.03:0,6,376	0/1:12,0:12:79.55:80,0,93	0/0:10,0:10:15.95:0,16,170	0/0:38,0:38:54.63:0,55,408	0/1:22,0:22:18.50:19,0,172	0/1:25,0:23:99:110,0,237	0/1:28,0:27:40.38:40,0,311	0/0:5,0:5:14.84:0,15,106
chr10	34656564	.	T	TC	7252.86	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-1.579;DP=250;FS=0.000;HRun=0;HaplotypeScore=20.6279;InbreedingCoeff=0.6163;MQ=41.39;MQ0=26;MQRankSum=0.804;QD=32.09;ReadPosRankSum=1.677;VQSLOD=4.4900;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,11:8:18.06:287,18,0	1/1:0,3:3:9.03:144,9,0	0/0:12,0:2:5.93:0,6,59	0/0:12,0:3:9.03:0,9,126	1/1:0,15:15:39.05:588,39,0	1/1:0,9:4:12.04:191,12,0	1/1:1,2:1:3.01:48,3,0	1/1:2,7:7:21.07:335,21,0	1/1:0,4:3:9.03:143,9,0	1/1:0,15:13:39.13:622,39,0	1/1:0,13:11:27.09:430,27,0	1/1:0,9:8:21.07:334,21,0	1/1:0,9:7:12.04:191,12,0	1/1:0,5:3:6.02:96,6,0	1/1:0,10:7:18.06:286,18,0	1/1:0,7:5:15.05:237,15,0	1/1:1,8:8:18.06:278,18,0	1/1:0,9:8:12.04:191,12,0	1/1:0,2:2:6.02:96,6,0	1/1:0,12:11:27.09:429,27,0	1/1:0,6:5:9.03:144,9,0	1/1:1,11:10:21.07:332,21,0	1/1:0,10:10:27.09:431,27,0	1/1:0,8:5:12.04:191,12,0	1/1:1,5:6:11.97:161,12,0	1/1:0,10:9:27.08:410,27,0	1/1:0,14:11:26.96:370,27,0	1/1:0,6:6:18.06:288,18,0
chr10	34656993	.	CTTCTGA	C	8930.61	PASS	AB=0.693;AC=35;AF=0.761;AN=46;BaseQRankSum=1.808;DP=344;DS;FS=141.980;HRun=0;HaplotypeScore=84.4698;InbreedingCoeff=0.2800;MQ=51.61;MQ0=36;MQRankSum=-7.695;QD=41.15;ReadPosRankSum=7.030;VQSLOD=2.1298;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,2:4:6.02:142,6,0	./.	0/0:43,0:20:47.85:0,48,1322	0/0:48,0:25:29.80:0,30,1693	1/1:4,8:9:9.03:178,9,0	0/1:5,5:8:8.36:272,0,8	0/1:3,2:3:17.33:133,0,17	./.	1/1:3,6:8:15.05:354,15,0	1/1:3,13:15:39.13:920,39,0	1/1:3,7:9:15.05:320,15,0	1/1:2,13:14:36.12:849,36,0	1/1:6,8:12:1.64:541,2,0	1/1:3,11:11:6.26:613,6,0	0/1:3,6:6:7.61:336,0,8	1/1:3,11:13:10.56:753,11,0	1/1:1,3:3:6.02:142,6,0	./.	0/1:10,2:2:46.94:65,0,47	1/1:1,12:13:3.01:71,3,0	0/0:8,1:6:8.90:0,9,111	1/1:1,13:14:39.13:920,39,0	1/1:1,11:11:30.10:708,30,0	0/1:2,3:5:33.85:200,0,34	./.	1/1:1,4:5:12.04:283,12,0	1/1:1,17:16:48.16:1132,48,0	./.
chr10	34663224	.	T	TGGGG	3996.36	PASS	AB=1.000;AC=51;AF=0.911;AN=56;BaseQRankSum=-2.987;DP=277;FS=13.841;HRun=12;HaplotypeScore=84.7224;InbreedingCoeff=0.2979;MQ=83.39;MQ0=1;MQRankSum=-3.160;QD=15.43;ReadPosRankSum=0.718;VQSLOD=0.0690;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:29:41.85:652,42,0	0/1:1,0:1:0:0,0,0	0/1:21,0:14:3.15:3,0,84	0/0:18,0:13:6.11:0,6,113	0/1:7,0:7:0:0,0,0	1/1:11,0:11:9.48:99,9,0	1/1:20,1:22:25.53:317,26,0	1/1:12,0:12:3.48:13,3,0	1/1:14,0:14:9.89:94,10,0	1/1:4,0:4:3.01:52,3,0	1/1:4,0:4:3.01:41,3,0	1/1:8,0:8:3.01:47,3,0	1/1:7,0:7:6.91:108,7,0	1/1:8,0:8:15.05:267,15,0	1/1:7,0:9:18.06:320,18,0	1/1:15,0:15:24.07:384,24,0	1/1:9,6:16:10.75:152,11,0	1/1:8,0:8:9.03:153,9,0	1/1:7,0:7:9.02:130,9,0	1/1:7,0:7:10.56:113,11,0	1/1:6,0:6:3.01:40,3,0	1/1:9,0:9:16.20:294,16,0	1/1:4,0:4:6:55,6,0	1/1:4,0:4:6.02:96,6,0	1/1:4,0:4:3.01:48,3,0	1/1:8,0:8:3.01:52,3,0	1/1:12,0:12:26.82:390,27,0	1/1:2,0:2:6:75,6,0
chr10	34663227	.	G	GA	92.19	PASS	AB=0.912;AC=13;AF=0.232;AN=56;BaseQRankSum=0.461;DP=268;FS=0.000;HRun=0;HaplotypeScore=69.9953;InbreedingCoeff=-0.0061;MQ=84.21;MQ0=1;MQRankSum=-1.465;QD=1.07;ReadPosRankSum=-2.150;VQSLOD=1.1302;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:65.07:0,65,372	0/0:1,0:1:2.97:0,3,20	0/0:21,0:14:25.44:0,25,271	0/0:19,0:14:21.91:0,22,176	0/0:5,0:5:2.01:0,2,17	0/0:9,0:9:17.82:0,18,125	0/0:24,0:24:36.78:0,37,219	0/1:10,6:16:69.23:69,0,96	0/0:15,0:15:9.60:0,10,59	0/1:6,0:6:11.81:12,0,57	1/1:2,0:2:2.94:18,3,0	0/0:7,0:7:11.81:0,12,80	0/1:6,0:6:2.25:2,0,60	0/0:5,0:7:4.30:0,4,30	0/1:9,0:9:15.46:15,0,24	0/1:13,0:13:24.23:24,0,62	0/0:14,0:14:19.39:0,19,138	0/1:8,0:8:17.16:17,0,100	0/0:6,0:6:2.48:0,2,73	0/1:6,0:6:10.01:14,0,10	0/1:5,1:6:11.31:13,0,11	1/1:9,0:9:6.53:46,7,0	0/0:5,0:5:14.81:0,15,108	0/0:4,0:4:8.89:0,9,59	0/1:2,3:5:0.07:0,0,45	0/0:5,0:5:12.80:0,13,94	0/0:13,0:13:7.25:0,7,86	0/0:2,0:2:3.63:0,4,14
chr10	34663233	.	G	GA	453.18	PASS	AB=0.860;AC=18;AF=0.321;AN=56;BaseQRankSum=3.659;DP=258;FS=24.004;HRun=0;HaplotypeScore=66.1948;InbreedingCoeff=0.1083;MQ=92.51;MQ0=1;MQRankSum=-6.108;QD=4.82;ReadPosRankSum=5.323;VQSLOD=1.4731;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:24:23.22:0,23,114	0/0:3,0:3:8.36:0,8,40	0/0:27,0:19:18.91:0,19,286	0/0:20,0:15:31.30:0,31,227	0/0:3,0:3:2.88:0,3,15	0/0:8,0:8:19.69:0,20,106	0/0:22,0:22:31.39:0,31,178	0/0:16,0:16:19.03:0,19,136	0/0:14,0:14:9.34:0,9,51	0/1:5,1:6:5.74:28,0,6	0/0:2,0:2:2.90:0,3,16	0/0:3,0:3:2.90:0,3,16	0/1:4,1:5:8.70:9,0,18	1/1:2,3:5:8.96:42,9,0	1/1:3,5:8:0.34:56,0,0	0/1:6,6:12:22.70:79,0,23	0/0:13,0:13:18.84:0,19,104	0/1:7,0:7:26.22:26,0,31	0/1:5,0:6:2.07:2,0,33	0/1:5,1:6:18.50:19,0,21	0/0:4,1:5:3.31:0,3,15	0/1:5,4:9:17.98:60,0,18	0/1:6,0:6:3.99:4,0,53	0/0:4,0:4:5.86:0,6,35	0/1:6,0:6:3.37:24,0,3	0/1:4,1:5:3.10:71,0,3	1/1:5,6:11:4.83:165,5,0	1/1:1,1:2:4.96:23,5,0
chr10	34663234	.	G	GGGGGGA	7381.92	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-3.702;DP=260;FS=2.108;HRun=0;HaplotypeScore=76.7873;InbreedingCoeff=0.5612;MQ=92.37;MQ0=1;MQRankSum=-5.016;QD=34.66;ReadPosRankSum=1.055;VQSLOD=4.5134;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,0:22:56.34:921,56,0	1/1:3,0:3:8.97:71,9,0	0/0:25,0:18:29.69:0,30,336	0/0:21,0:16:15.67:0,16,252	1/1:1,0:3:2.94:18,3,0	1/1:8,0:8:21.49:271,21,0	1/1:7,0:23:24.78:378,25,0	1/1:16,0:16:32.09:267,32,0	1/1:4,0:14:9.95:119,10,0	1/1:5,1:6:15.03:263,15,0	1/1:3,0:3:5.95:105,6,0	1/1:0,0:3:3.01:72,3,0	1/1:3,1:4:11.98:202,12,0	1/1:1,3:5:15.05:408,15,0	1/1:3,5:8:24.05:556,24,0	1/1:6,6:12:32.82:662,33,0	1/1:15,0:15:16.42:163,16,0	1/1:6,1:7:17.99:387,18,0	1/1:5,0:6:15.03:281,15,0	1/1:5,1:6:14.83:255,15,0	1/1:5,1:6:2.68:61,3,0	1/1:3,4:9:23.95:499,24,0	1/1:6,0:6:17.91:166,18,0	1/1:0,0:4:6.02:138,6,0	1/1:6,0:6:6.01:114,6,0	1/1:4,1:5:11.97:232,12,0	1/1:5,6:11:32.75:686,33,0	1/1:1,1:2:2.76:88,3,0
chr10	34665624	.	TACGGG	T	20871.95	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=17.332;DP=644;FS=0.299;HRun=0;HaplotypeScore=132.5284;InbreedingCoeff=0.9844;MQ=77.17;MQ0=0;MQRankSum=-5.768;QD=55.51;ReadPosRankSum=2.548;VQSLOD=5.5009;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:84.27:0,84,2591	1/1:1,9:10:21.07:456,21,0	0/0:18,0:18:51.17:0,51,1469	0/0:21,0:21:54.18:0,54,1573	0/0:30,0:30:90.31:0,90,2825	0/0:26,0:26:72.25:0,72,2238	0/0:21,0:21:63.22:0,63,1916	1/1:6,29:35:87.30:1838,87,0	0/0:29,0:29:87.30:0,87,2735	1/1:2,21:23:63.22:1368,63,0	1/1:1,14:15:36.12:769,36,0	0/0:18,0:18:54.19:0,54,1678	1/1:0,28:28:69.24:1499,69,0	1/1:0,27:27:75.26:1628,75,0	1/1:1,31:32:84.29:1823,84,0	1/1:2,26:28:75.26:1621,75,0	0/0:27,0:27:81.28:0,81,2473	1/1:0,3:3:6.02:130,6,0	1/1:1,15:16:42.13:871,42,0	1/1:0,24:24:63.22:1367,63,0	1/1:1,22:23:45.15:977,45,0	1/1:1,24:25:66.23:1423,66,0	0/0:21,0:21:57.20:0,57,1806	0/0:24,0:24:72.20:0,72,2187	1/1:0,11:11:33.11:717,33,0	1/1:0,25:25:75.24:1586,75,0	1/1:2,28:30:69.24:1496,69,0	1/1:1,20:21:60.21:1303,60,0
chr10	34666013	.	A	AT	6988.43	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-11.907;DP=530;FS=9.729;HRun=11;HaplotypeScore=51.8087;InbreedingCoeff=0.9623;MQ=68.76;MQ0=0;MQRankSum=-1.588;QD=22.12;ReadPosRankSum=-1.534;VQSLOD=4.7401;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:28:70.70:0,71,537	1/1:1,7:8:21.04:213,21,0	0/0:8,0:7:11.61:0,12,91	0/0:6,0:6:2.96:0,3,24	0/0:33,0:35:84.68:0,85,638	0/0:22,0:24:66.83:0,67,499	0/0:17,0:17:35.82:0,36,276	1/1:8,20:28:65.85:626,66,0	0/0:17,0:17:41.81:0,42,322	1/1:7,22:29:60.07:588,60,0	1/1:1,22:24:59.91:577,60,0	0/0:15,0:15:41.78:0,42,318	1/1:1,16:17:32.90:335,33,0	1/1:1,15:16:39.08:396,39,0	1/1:1,12:13:27.05:274,27,0	1/1:2,16:19:44.92:441,45,0	0/0:28,0:28:68.70:0,69,534	1/1:2,6:8:18.03:181,18,0	1/1:1,11:12:27.05:274,27,0	1/1:5,25:30:66.09:659,66,0	1/1:1,15:16:39.08:396,39,0	1/1:3,14:17:40.28:388,40,0	0/0:31,0:31:75.51:0,76,579	0/0:5,0:5:11.92:0,12,89	1/1:1,23:24:60.12:609,60,0	1/1:5,14:19:42.05:413,42,0	1/1:4,17:21:24.81:423,25,0	1/1:5,9:15:20.88:197,21,0
chr10	34667307	.	CTTCAAGTTCAAG	C	23652.82	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=16.762;DP=629;FS=8.073;HRun=0;HaplotypeScore=242.0769;InbreedingCoeff=0.9803;MQ=86.70;MQ0=0;MQRankSum=-16.299;QD=65.52;ReadPosRankSum=2.151;VQSLOD=2.8946;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:53.25:0,53,3740	1/1:3,6:8:15.05:539,15,0	0/0:33,0:33:69.20:0,69,3380	0/0:21,0:21:42.12:0,42,1788	0/0:31,0:31:81.23:0,81,4320	0/0:34,0:34:96.33:0,96,5416	0/0:22,0:22:51.18:0,51,2793	1/1:14,15:29:48.12:1387,48,0	0/0:19,0:19:48.15:0,48,2581	1/1:8,23:30:69.23:2396,69,0	1/1:6,13:17:30.10:1006,30,0	0/0:21,0:21:57.18:0,57,3102	1/1:4,15:19:42.14:1508,42,0	1/1:5,17:22:45.15:1615,45,0	1/1:2,26:28:66.23:2370,66,0	1/1:5,19:24:54.19:1939,54,0	0/0:24,0:24:69.22:0,69,3824	1/1:2,8:10:15.05:539,15,0	1/1:11,5:16:15.03:454,15,0	1/1:7,22:28:63.22:2175,63,0	1/1:12,9:21:12.04:380,12,0	1/1:5,11:15:30.10:1023,30,0	0/0:25,0:25:57.20:0,57,3248	0/0:12,0:12:33.11:0,33,1714	1/1:4,20:23:51.18:1828,51,0	1/1:5,18:22:51.16:1695,51,0	1/1:9,25:34:69.24:2477,69,0	1/1:2,5:7:9.03:323,9,0
chr10	34667626	.	TA	T	15494.74	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=4.242;DP=496;FS=5.998;HRun=2;HaplotypeScore=69.6754;InbreedingCoeff=0.9844;MQ=93.81;MQ0=0;MQRankSum=-10.596;QD=34.66;ReadPosRankSum=6.034;VQSLOD=4.9042;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:0,26:26:75.20:954,75,0	1/1:0,6:6:18.06:233,18,0	0/0:29,0:29:68.36:0,68,981	0/0:18,2:20:18.48:0,18,767	1/1:2,20:22:57.19:739,57,0	1/1:1,20:21:54.18:701,54,0	1/1:0,17:17:45.15:584,45,0	1/1:0,40:40:99:1529,120,0	1/1:0,15:15:39.13:506,39,0	1/1:1,25:26:75.22:957,75,0	1/1:1,11:12:24.08:311,24,0	1/1:0,15:15:27.09:351,27,0	1/1:0,7:7:18.06:233,18,0	1/1:1,15:16:42.14:545,42,0	1/1:0,20:20:54.18:700,54,0	1/1:1,13:14:36.12:467,36,0	1/1:0,13:13:36.12:467,36,0	1/1:0,17:17:48.16:623,48,0	1/1:0,19:19:57.17:724,57,0	1/1:0,24:24:66.08:814,66,0	1/1:0,22:22:57.19:740,57,0	1/1:0,14:14:33.11:428,33,0	1/1:0,11:11:33.11:428,33,0	1/1:0,13:13:36.07:448,36,0	1/1:0,9:9:27.09:350,27,0	1/1:2,19:21:57.17:727,57,0	1/1:0,19:19:51.17:662,51,0	1/1:0,8:8:24:274,24,0
chr10	34667777	.	C	CTTT	4549.95	PASS	AB=0.819;AC=50;AF=0.893;AN=56;BaseQRankSum=-3.985;DP=430;FS=0.000;HRun=13;HaplotypeScore=60.2084;InbreedingCoeff=0.2179;MQ=57.29;MQ0=13;MQRankSum=-0.818;QD=11.52;ReadPosRankSum=1.372;VQSLOD=1.2249;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:12,1:13:16.58:206,17,0	1/1:2,1:4:3.01:54,3,0	0/0:17,0:7:2.74:0,3,15	0/0:18,0:12:0.13:0,0,21	1/1:19,10:30:14.16:330,14,0	1/1:3,0:18:12.04:171,12,0	1/1:7,0:6:11.45:83,11,0	1/1:33,6:39:41.76:451,42,0	1/1:10,0:9:6.96:29,7,0	1/1:7,15:23:38.01:491,38,0	1/1:6,11:18:21.52:316,22,0	1/1:8,0:8:5.34:24,5,0	1/1:10,0:7:5.23:61,5,0	1/1:4,0:5:9.20:79,9,0	1/1:10,1:14:10.56:127,11,0	0/1:11,0:12:23.39:31,0,23	1/1:19,2:22:23.07:275,23,0	1/1:17,0:15:21.78:246,22,0	1/1:3,12:16:35.39:338,35,0	1/1:7,8:17:12.58:216,13,0	1/1:1,5:6:3.48:54,3,0	1/1:5,2:9:10.26:133,10,0	1/1:5,0:9:8.97:90,9,0	1/1:5,1:6:3.01:54,3,0	1/1:6,13:19:11.20:162,11,0	1/1:7,10:17:29.43:283,29,0	0/1:15,9:23:2.42:167,0,2	1/1:8,6:16:7.82:81,8,0
chr10	34667900	.	T	TAGATGG	22462.36	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-6.365;DP=425;FS=1.446;HRun=0;HaplotypeScore=82.3028;InbreedingCoeff=0.8390;MQ=84.18;MQ0=0;MQRankSum=-9.677;QD=58.04;ReadPosRankSum=4.589;VQSLOD=5.1562;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,11:16:24.08:793,24,0	1/1:0,8:8:21.03:666,21,0	0/0:16,0:16:45.12:0,45,956	0/0:22,0:22:62.77:0,63,1331	1/1:3,12:16:21:664,21,0	1/1:6,16:27:50.98:1381,51,0	1/1:4,8:15:21.07:704,21,0	1/1:6,3:15:42.07:873,42,0	1/1:1,12:15:27.09:970,27,0	1/1:3,8:13:36.10:985,36,0	1/1:1,15:17:30.10:1077,30,0	1/1:0,8:14:24.08:849,24,0	1/1:2,8:12:18.02:559,18,0	1/1:2,7:11:21.03:666,21,0	1/1:5,15:21:57.11:1727,57,0	1/1:2,13:16:39.09:1216,39,0	1/1:6,11:19:27.09:952,27,0	1/1:1,8:13:18.06:645,18,0	1/1:3,5:18:51.14:1320,51,0	1/1:3,12:21:30.10:937,30,0	1/1:3,12:16:6.02:77,6,0	1/1:2,0:2:3.01:106,3,0	1/1:1,7:10:17.88:643,18,0	1/1:5,13:21:24.03:861,24,0	1/1:0,12:15:27.09:919,27,0	1/1:0,10:12:33.11:1109,33,0	1/1:0,16:18:42.14:1509,42,0	1/1:2,2:5:11.95:256,12,0
chr10	34669320	.	A	AT	829.43	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-5.659;DP=511;FS=0.000;HRun=8;HaplotypeScore=46.8392;InbreedingCoeff=0.9715;MQ=80.12;MQ0=0;MQRankSum=-2.041;QD=24.40;ReadPosRankSum=0.749;VQSLOD=3.9783;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:74.95:0,75,670	0/0:9,0:9:27.01:0,27,247	0/0:15,0:15:32.51:0,33,283	0/0:11,0:11:16.25:0,16,140	0/0:28,0:28:69:0,69,622	0/0:31,0:31:78.01:0,78,709	0/0:12,0:12:36.02:0,36,329	0/0:31,0:31:78:0,78,706	0/0:11,0:11:30.01:0,30,275	0/0:36,0:36:90.03:0,90,823	0/0:24,0:24:69.04:0,69,632	1/1:2,13:15:30.09:346,30,0	0/0:13,0:13:36.02:0,36,329	0/0:17,0:17:48.03:0,48,439	0/0:19,0:19:51.03:0,51,467	0/0:13,0:13:39.02:0,39,357	0/0:28,0:28:75.03:0,75,686	0/0:18,0:18:35.97:0,36,323	0/0:10,0:10:27.01:0,27,247	0/0:29,0:29:74.13:0,74,685	0/0:12,0:12:30:0,30,274	0/0:13,0:13:33.02:0,33,302	1/1:2,14:16:45.13:517,45,0	1/1:0,3:3:9.03:104,9,0	0/0:19,0:19:57.01:0,57,516	0/0:24,0:24:66.03:0,66,601	0/0:20,0:20:60.03:0,60,549	0/0:7,0:7:21.01:0,21,192
chr10	34674956	.	AATG	A	621.22	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.481;DP=658;FS=0.000;HRun=0;HaplotypeScore=88.5172;InbreedingCoeff=0.9965;MQ=82.19;MQ0=0;MQRankSum=-3.620;QD=31.06;ReadPosRankSum=1.788;VQSLOD=3.9862;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,19:20:42.14:716,42,0	0/0:12,0:12:36.12:0,36,820	0/0:18,0:18:51.16:0,51,946	0/0:18,0:18:51.17:0,51,1019	0/0:39,0:39:99:0,117,2625	0/0:28,0:28:81.26:0,81,1798	0/0:16,0:16:48.16:0,48,1080	0/0:38,0:37:99:0,111,2487	0/0:32,0:32:93.32:0,93,2145	0/0:30,0:30:78.27:0,78,1790	0/0:36,0:36:99:0,105,2399	0/0:19,0:19:51.17:0,51,1175	0/0:30,0:30:87.28:0,87,1927	0/0:17,0:17:51.18:0,51,1176	0/0:27,0:27:81.28:0,81,1868	0/0:27,0:27:81.28:0,81,1859	0/0:11,0:11:33.11:0,33,728	0/0:17,0:17:48.16:0,48,1097	0/0:25,0:25:75.26:0,75,1679	0/0:20,0:20:60.19:0,60,1306	0/0:35,0:35:99:0,102,2298	0/0:21,0:21:60.21:0,60,1383	0/0:16,0:16:48.16:0,48,1107	0/0:8,0:8:24.08:0,24,554	0/0:24,0:24:72.25:0,72,1652	0/0:33,0:33:96.31:0,96,2118	0/0:32,0:32:96.33:0,96,2203	0/0:9,0:9:27.09:0,27,604
chr10	34679673	.	T	TA	2732.14	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-12.760;DP=584;FS=2.034;HRun=6;HaplotypeScore=52.7483;InbreedingCoeff=0.9770;MQ=88.39;MQ0=1;MQRankSum=-1.630;QD=32.14;ReadPosRankSum=0.272;VQSLOD=3.9120;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:57.09:0,57,566	0/0:5,0:5:15.03:0,15,153	0/0:28,0:28:25.71:0,26,512	0/0:14,0:14:39.02:0,39,369	1/1:2,20:22:60.19:755,60,0	1/1:2,19:21:57.18:717,57,0	1/1:1,18:19:51.16:642,51,0	0/0:26,0:26:63.13:0,63,637	1/1:0,17:17:48.15:604,48,0	0/0:26,0:26:72.16:0,72,735	0/0:26,0:26:69.13:0,69,693	0/0:19,0:19:57.12:0,57,575	0/0:39,0:39:99:0,111,1118	0/0:16,0:16:45.08:0,45,446	0/0:27,0:27:75.16:0,75,759	0/0:27,0:27:75.16:0,75,765	1/1:0,6:6:15.05:189,15,0	0/0:17,0:17:45.10:0,45,459	0/0:24,0:24:72.16:0,72,735	0/0:31,0:31:87.20:0,87,888	0/0:22,0:21:54.12:0,54,551	0/0:25,0:25:72.16:0,72,734	0/0:23,0:23:66.11:0,66,662	0/0:7,0:7:18.04:0,18,184	0/0:21,0:21:57.13:0,57,582	0/0:24,0:24:57.11:0,57,576	0/0:30,0:29:90.19:0,90,910	0/0:3,0:3:9.02:0,9,92
chr10	34680295	.	TAAG	T	17702.44	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=4.536;DP=491;FS=3.036;HRun=0;HaplotypeScore=106.1367;InbreedingCoeff=0.9822;MQ=71.84;MQ0=0;MQRankSum=-2.316;QD=41.85;ReadPosRankSum=1.899;VQSLOD=6.4034;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,9:9:27.09:434,27,0	1/1:0,14:14:36.12:579,36,0	0/0:10,0:10:27.06:0,27,541	0/0:9,0:9:20.66:0,21,397	1/1:2,23:25:66.23:1061,66,0	1/1:1,15:16:42.14:652,42,0	1/1:2,9:11:24.08:386,24,0	1/1:3,20:23:60.20:962,60,0	1/1:2,14:16:42.14:664,42,0	1/1:2,21:23:63.21:1012,63,0	1/1:2,25:27:75.25:1182,75,0	0/0:19,0:19:54.19:0,54,1193	1/1:4,17:21:42.14:675,42,0	1/1:2,18:20:48.16:771,48,0	1/1:2,18:20:51.17:820,51,0	1/1:0,17:17:51.17:819,51,0	1/1:1,13:14:30.10:482,30,0	1/1:0,6:6:18.06:279,18,0	1/1:0,15:15:45.15:721,45,0	1/1:2,30:32:90.26:1339,90,0	1/1:0,4:4:8.99:116,9,0	1/1:2,20:22:57.19:882,57,0	0/0:20,0:20:60.21:0,60,1296	0/0:10,0:10:30.10:0,30,652	1/1:0,22:22:66.22:1038,66,0	1/1:2,23:25:69.24:1109,69,0	1/1:2,28:30:78.26:1238,78,0	1/1:1,10:11:30.10:482,30,0
chr10	34680363	.	CA	C	176.17	PASS	AB=0.869;AC=15;AF=0.278;AN=54;BaseQRankSum=-1.664;DP=520;FS=24.445;HRun=15;HaplotypeScore=166.7134;InbreedingCoeff=-0.0324;MQ=43.60;MQ0=11;MQRankSum=-4.942;QD=0.69;ReadPosRankSum=4.328;VQSLOD=-0.6658;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:9:16.31:0,16,81	0/1:8,2:10:23.36:27,0,23	./.	0/0:7,0:5:2.99:0,3,24	0/0:20,0:34:68.63:0,69,380	0/0:13,0:21:41.01:0,41,221	0/0:6,0:11:17.96:0,18,86	0/1:23,0:20:51.22:51,0,76	0/0:7,0:11:20.12:0,20,109	0/1:20,4:23:26.55:27,0,90	0/1:21,3:23:17:17,0,96	1/1:7,0:16:13.40:39,13,0	0/0:24,0:25:32.46:0,32,209	0/0:12,2:15:9.41:0,9,85	0/0:21,3:24:13.30:0,13,197	0/0:19,1:20:23.72:0,24,156	0/0:6,0:11:23.02:0,23,126	0/1:10,2:11:17.15:17,0,44	0/1:20,3:22:16.77:17,0,106	0/0:23,2:27:13.50:0,14,178	0/1:4,1:5:10.76:11,0,14	0/1:20,5:27:15.80:16,0,110	1/1:8,1:17:8.71:42,9,0	0/0:5,0:6:0:0,0,0	0/0:19,3:25:9.39:0,9,165	0/1:19,5:24:44.75:45,0,98	0/1:32,5:37:21.74:22,0,162	0/1:11,1:11:3.46:3,0,34
chr10	34680373	.	A	AAAAAC	15299.19	PASS	AB=1.000;AC=39;AF=0.696;AN=56;BaseQRankSum=-10.335;DP=530;FS=0.828;HRun=0;HaplotypeScore=149.3434;InbreedingCoeff=0.6855;MQ=43.76;MQ0=11;MQRankSum=-0.831;QD=36.08;ReadPosRankSum=-0.333;VQSLOD=4.8536;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:10:3.17:0,3,77	1/1:9,2:10:29.83:359,30,0	1/1:11,0:3:0.47:1,0,0	0/0:6,0:3:0.47:0,0,1	0/0:41,0:40:53.18:0,53,463	0/1:23,0:23:1.38:1,0,207	0/1:11,0:11:13.43:13,0,104	1/1:7,17:27:44:1009,44,0	0/0:11,0:11:21.14:0,21,122	1/1:17,7:24:54.78:934,55,0	1/1:14,6:20:50.10:896,50,0	0/0:19,0:20:38.61:0,39,368	1/1:12,6:24:61.47:1213,61,0	1/1:7,5:12:29.95:620,30,0	1/1:13,10:26:58.18:1403,58,0	1/1:11,9:20:55.01:1154,55,0	0/0:11,0:11:10.95:0,11,168	1/1:5,1:8:23.91:384,24,0	1/1:25,4:29:52.11:876,52,0	1/1:13,10:25:53.20:1186,53,0	1/1:5,1:6:14.74:194,15,0	1/1:18,6:24:32.13:949,32,0	0/1:19,0:20:14.35:14,0,191	0/0:6,0:6:10.85:0,11,196	1/1:14,10:25:69.88:1322,70,0	1/1:13,8:23:65.22:1055,65,0	1/1:19,9:32:78.61:1472,79,0	1/1:9,1:10:14.94:244,15,0
chr10	34680379	.	CA	C	133.72	PASS	AB=0.917;AC=12;AF=0.214;AN=56;BaseQRankSum=3.520;DP=525;FS=8.708;HRun=15;HaplotypeScore=138.7033;InbreedingCoeff=0.2147;MQ=49.51;MQ0=11;MQRankSum=-7.841;QD=0.73;ReadPosRankSum=-2.614;VQSLOD=-0.3272;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:9:20.99:0,21,235	0/0:12,0:11:23.99:0,24,290	0/0:14,0:5:5.31:0,5,26	0/1:7,1:5:15.35:15,0,69	0/0:39,0:38:86.83:0,87,978	0/0:21,0:21:52.05:0,52,631	0/0:11,0:11:29.81:0,30,313	0/1:29,0:26:29.71:30,0,609	0/0:13,0:13:34.45:0,34,377	0/0:23,2:24:1.48:0,1,573	0/0:20,0:19:39.73:0,40,528	1/1:9,0:18:22.92:66,23,0	0/0:25,0:24:58.92:0,59,699	0/0:15,1:16:23.86:0,24,414	0/1:26,3:28:12.81:13,0,701	0/0:19,1:19:27.18:0,27,593	0/0:12,0:12:26.88:0,27,254	0/0:9,0:8:17.88:0,18,190	0/0:29,1:28:17.37:0,17,726	0/0:26,1:27:44.44:0,44,829	0/0:6,0:6:12.04:0,12,148	0/1:17,3:20:64.58:65,0,418	1/1:9,0:18:14.78:45,15,0	1/1:4,0:5:1.52:4,2,0	0/1:23,2:24:19.22:19,0,505	0/0:22,2:24:1.52:0,2,604	0/1:27,3:30:29.98:30,0,653	0/0:9,0:8:6.74:0,7,204
chr10	34680390	.	A	AAAC	490.46	PASS	AB=0.812;AC=6;AF=0.107;AN=56;BaseQRankSum=7.222;DP=545;FS=2.216;HRun=0;HaplotypeScore=170.0131;InbreedingCoeff=0.1793;MQ=55.40;MQ0=4;MQRankSum=-7.903;QD=6.81;ReadPosRankSum=-4.210;VQSLOD=2.3452;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:7:20.94:0,21,311	0/0:9,0:9:13.78:0,14,332	0/0:16,0:7:14.94:0,15,190	0/0:9,0:6:8.43:0,8,164	0/0:38,0:38:81.60:0,82,1243	0/0:22,0:22:42.61:0,43,838	0/0:13,0:13:33.02:0,33,433	0/0:30,0:28:78.24:0,78,1143	0/0:15,0:15:39.11:0,39,575	0/0:26,0:25:59.19:0,59,997	0/0:19,0:19:17.44:0,17,666	0/1:11,12:23:37.06:353,0,37	0/0:24,0:24:57.30:0,57,854	0/0:15,0:15:34.60:0,35,526	0/0:32,0:31:72.13:0,72,1132	0/0:20,0:19:55.64:0,56,754	0/1:11,0:12:1.85:2,0,193	0/0:9,0:9:21.88:0,22,286	0/0:24,0:23:33.88:0,34,943	0/0:31,0:31:82.32:0,82,1238	0/0:7,0:7:10.80:0,11,191	0/0:21,0:21:15.40:0,15,554	0/1:10,10:20:22.76:205,0,23	1/1:1,6:8:3.01:34,3,0	0/0:25,0:24:39.72:0,40,678	0/0:26,0:26:24.10:0,24,932	0/0:34,0:34:78.33:0,78,1014	0/1:9,0:8:2.29:2,0,273
chr10	34683041	.	T	TTC	1280.45	PASS	AB=0.938;AC=41;AF=0.759;AN=54;BaseQRankSum=-0.077;DP=591;FS=10.171;HRun=0;HaplotypeScore=111.6154;InbreedingCoeff=0.1860;MQ=70.68;MQ0=17;MQRankSum=-0.870;QD=2.88;ReadPosRankSum=-1.260;VQSLOD=1.4861;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:21:6.69:0,7,35	0/1:8,0:8:25.19:38,0,25	./.	0/0:50,0:22:1.97:0,2,8	1/1:20,0:20:5.87:69,6,0	1/1:17,8:26:3.01:44,3,0	0/1:20,0:18:0.01:0,0,0	1/1:40,0:38:13.22:86,13,0	0/0:16,4:23:2.63:0,3,14	1/1:12,0:12:11.57:82,12,0	0/1:16,0:16:20.63:55,0,21	0/0:14,0:16:2.84:0,3,14	1/1:23,0:21:18.96:152,19,0	1/1:10,0:13:3:26,3,0	1/1:16,1:23:5.46:43,5,0	1/1:13,2:25:12.01:123,12,0	0/1:9,4:14:21.31:73,0,21	1/1:10,0:10:2.74:12,3,0	1/1:20,0:20:13.45:62,13,0	1/1:25,0:25:4.31:14,4,0	1/1:17,0:17:2.98:22,3,0	1/1:24,0:24:7.59:28,8,0	1/1:14,4:18:3.01:44,3,0	0/1:19,1:21:85.34:109,0,85	1/1:32,0:32:6.02:88,6,0	1/1:15,0:15:20.08:165,20,0	1/1:15,0:14:10.21:72,10,0	1/1:6,0:5:3.74:12,4,0
chr10	34683510	.	A	ACACACACCCT	6028.31	PASS	AB=0.990;AC=29;AF=0.518;AN=56;BaseQRankSum=-4.596;DP=392;FS=6.223;HRun=0;HaplotypeScore=158.2603;InbreedingCoeff=-0.0146;MQ=62.04;MQ0=10;MQRankSum=-8.483;QD=21.45;ReadPosRankSum=-1.701;VQSLOD=3.6066;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,0:9:2.07:36,2,0	0/0:4,0:4:9.02:0,9,143	0/0:33,0:12:28.96:0,29,402	0/0:30,0:14:16.79:0,17,477	1/1:9,1:13:24.08:1124,24,0	1/1:11,12:26:42.14:1681,42,0	0/1:16,0:16:34.25:275,0,34	0/1:31,0:30:99:397,0,246	1/1:6,2:13:21.07:781,21,0	0/1:16,0:16:99:147,0,333	0/1:17,0:17:22.05:22,0,463	1/1:8,0:8:20.62:162,21,0	0/1:11,0:11:89.14:89,0,212	0/1:12,0:12:22.61:23,0,326	0/1:21,0:21:96.26:96,0,552	0/0:7,0:7:8.88:0,9,132	1/1:5,0:5:15.05:547,15,0	0/0:4,0:4:5.52:0,6,61	0/1:6,0:7:67.56:131,0,68	0/0:21,0:21:50.99:0,51,754	0/1:11,0:10:42.08:42,0,108	0/1:11,0:11:46.58:47,0,380	1/1:11,0:10:12.04:151,12,0	1/1:9,0:9:5.02:69,5,0	0/0:12,0:12:21.04:0,21,332	0/1:13,0:13:85.36:85,0,299	0/1:16,0:15:77.03:77,0,314	0/1:5,0:5:45.89:46,0,122
chr10	34683511	.	C	CACACA	1191.91	PASS	AB=0.923;AC=9;AF=0.161;AN=56;BaseQRankSum=1.431;DP=359;FS=31.123;HRun=0;HaplotypeScore=132.4036;InbreedingCoeff=0.4615;MQ=65.03;MQ0=10;MQRankSum=-4.371;QD=21.67;ReadPosRankSum=0.757;VQSLOD=1.2475;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:4:3:37,3,0	0/0:4,0:4:9.03:0,9,207	0/0:34,0:13:29.70:0,30,369	0/0:29,0:14:20:0,20,342	1/1:6,1:8:12.03:267,12,0	0/1:12,0:13:7.03:478,0,7	0/1:15,0:16:60.11:60,0,94	0/0:30,0:29:67.50:0,67,903	0/1:8,1:9:22.65:240,0,23	0/0:16,0:16:44.50:0,45,720	0/0:17,0:17:31.64:0,32,593	0/0:7,0:7:14.79:0,15,75	0/0:11,0:11:28.48:0,28,445	0/0:12,0:12:27.09:0,27,461	0/0:21,0:21:53.50:0,54,913	0/0:6,0:6:7.43:0,7,205	1/1:2,2:5:15.03:254,15,0	0/0:4,0:4:2.85:0,3,69	0/0:7,0:7:12.49:0,12,170	0/0:21,0:21:51.65:0,52,1082	0/0:11,0:10:15.01:0,15,239	0/0:11,0:11:29.85:0,30,512	0/0:10,0:10:7.93:0,8,22	0/0:8,0:8:3.85:0,4,11	0/0:12,0:12:21.52:0,22,392	0/0:13,0:13:37.95:0,38,573	0/0:15,0:14:38.91:0,39,612	0/0:5,0:5:14.99:0,15,216
chr10	34683513	.	C	CTTT	11874.96	PASS	AB=0.636;AC=51;AF=0.911;AN=56;BaseQRankSum=0.599;DP=469;FS=7.879;HRun=9;HaplotypeScore=162.9720;InbreedingCoeff=0.6749;MQ=63.89;MQ0=10;MQRankSum=-6.689;QD=29.39;ReadPosRankSum=-0.789;VQSLOD=1.9479;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,1:4:4.37:62,4,0	1/1:6,2:9:21.07:376,21,0	0/0:34,0:15:32.34:0,32,374	0/0:28,0:16:14.89:0,15,155	1/1:8,0:12:25.62:335,26,0	1/1:16,0:19:42.98:529,43,0	1/1:7,0:20:23.64:428,24,0	1/1:21,9:32:51.16:898,51,0	1/1:8,1:12:26.96:389,27,0	1/1:8,5:19:31.33:485,31,0	1/1:13,8:24:54.94:830,55,0	0/1:3,0:7:3.46:3,0,17	1/1:10,5:16:30.10:557,30,0	1/1:13,6:19:38.80:668,39,0	1/1:18,11:33:25.28:991,25,0	1/1:8,3:11:27.09:475,27,0	1/1:5,0:9:18.04:285,18,0	1/1:3,2:5:0.07:90,0,0	1/1:5,3:10:23.42:356,23,0	1/1:15,11:30:69.14:1104,69,0	1/1:9,5:15:36.88:449,37,0	1/1:8,5:14:24.95:432,25,0	1/1:0,0:10:14.27:65,14,0	1/1:2,0:9:6.34:29,6,0	1/1:8,6:15:29.13:477,29,0	1/1:14,6:20:36.12:651,36,0	1/1:8,9:17:14.69:676,15,0	1/1:5,3:8:12.04:235,12,0
chr10	34684352	.	C	CG	350.42	PASS	AB=0.988;AC=8;AF=0.143;AN=56;BaseQRankSum=2.196;DP=521;FS=4.890;HRun=3;HaplotypeScore=103.5799;InbreedingCoeff=0.6288;MQ=58.52;MQ0=22;MQRankSum=-2.685;QD=4.55;ReadPosRankSum=-0.943;VQSLOD=0.0947;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:31:9.07:0,9,259	0/0:13,0:13:27.03:0,27,296	0/0:22,0:6:1.47:0,1,29	0/1:38,0:15:5.36:5,0,75	0/0:35,0:34:66.03:0,66,729	0/0:24,0:20:5.04:0,5,335	0/0:17,0:15:26.91:0,27,258	0/0:19,0:19:47.50:0,47,445	0/0:13,0:11:27.07:0,27,311	0/0:24,0:24:54.10:0,54,584	0/0:18,0:17:30.53:0,31,304	1/1:3,8:11:9.03:125,9,0	0/0:20,0:14:15.33:0,15,131	0/0:14,0:11:14.97:0,15,135	0/0:15,0:13:30.03:0,30,298	0/0:22,0:18:36.03:0,36,382	0/0:21,0:20:48.09:0,48,545	0/0:18,0:15:33.54:0,34,376	0/0:14,0:11:27.06:0,27,303	0/0:23,1:24:51.13:0,51,584	0/0:12,0:11:18.03:0,18,202	0/0:10,0:10:18.01:0,18,191	1/1:2,9:9:17.92:226,18,0	1/1:4,7:11:9.03:125,9,0	0/0:12,0:12:15.02:0,15,158	0/0:20,0:18:45.01:0,45,482	0/0:23,0:19:36.01:0,36,385	0/1:4,0:4:2.93:3,0,45
chr10	34684515	.	CAAGATAG	C	17514.38	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=4.639;DP=485;FS=25.556;HRun=0;HaplotypeScore=121.1790;InbreedingCoeff=0.8070;MQ=78.50;MQ0=0;MQRankSum=-8.999;QD=39.81;ReadPosRankSum=6.497;VQSLOD=2.7126;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,13:17:21.07:452,21,0	1/1:0,6:6:15.05:360,15,0	0/0:20,0:20:45.13:0,45,1366	0/0:25,0:25:44.30:0,44,1421	1/1:0,13:13:27.09:613,27,0	1/1:7,29:35:81.28:1927,81,0	1/1:8,10:18:24.08:575,24,0	1/1:14,19:33:57.07:1040,57,0	1/1:0,11:10:21.07:505,21,0	1/1:3,22:25:51.18:1226,51,0	1/1:1,12:13:27.09:649,27,0	1/1:2,8:10:9.03:216,9,0	1/1:3,14:15:29.97:721,30,0	1/1:2,7:9:18.06:433,18,0	1/1:5,16:19:30.10:721,30,0	1/1:3,11:13:24.08:577,24,0	1/1:5,8:13:18.04:384,18,0	1/1:7,6:13:9.03:216,9,0	1/1:1,6:6:14.96:192,15,0	1/1:6,28:34:66.22:1528,66,0	1/1:8,5:13:6.02:108,6,0	1/1:4,18:22:48.16:1151,48,0	1/1:4,16:20:45.15:1041,45,0	1/1:5,9:14:6.02:144,6,0	1/1:2,12:14:30.10:721,30,0	1/1:5,14:19:36.12:813,36,0	1/1:4,18:21:42.14:985,42,0	1/1:0,4:4:9.03:216,9,0
chr10	34685745	.	C	CTA	30338.26	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-9.775;DP=688;FS=6.701;HRun=0;HaplotypeScore=70.3173;InbreedingCoeff=0.9895;MQ=90.48;MQ0=2;MQRankSum=-11.133;QD=47.85;ReadPosRankSum=6.146;VQSLOD=6.1679;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,35:39:84.29:1618,84,0	1/1:0,8:8:18.06:348,18,0	0/0:21,0:21:42.53:0,43,851	0/0:33,0:33:78.23:0,78,1125	1/1:2,19:21:47.94:927,48,0	1/1:1,17:18:36.12:695,36,0	1/1:1,30:31:63.22:1217,63,0	1/1:1,26:27:75.24:1404,75,0	1/1:0,19:21:51.17:985,51,0	1/1:1,30:31:93.31:1745,93,0	1/1:0,6:6:18.06:348,18,0	1/1:3,33:36:93.32:1777,93,0	1/1:1,36:40:87.30:1679,87,0	1/1:0,38:38:99:2028,105,0	1/1:0,34:34:87.30:1681,87,0	1/1:2,25:27:57.20:1101,57,0	1/1:0,27:27:72.25:1391,72,0	1/1:0,17:17:42.14:811,42,0	1/1:0,14:14:42.14:811,42,0	1/1:0,14:13:33.11:637,33,0	1/1:1,33:34:90.31:1738,90,0	1/1:0,30:31:78.27:1505,78,0	1/1:1,18:20:48.16:886,48,0	1/1:0,21:21:63.22:1217,63,0	1/1:0,19:19:48.16:927,48,0	1/1:1,25:26:75.24:1415,75,0	1/1:1,24:25:54.19:1043,54,0	1/1:1,7:8:21.07:406,21,0
chr10	34687360	.	A	AT	2932.47	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-10.464;DP=536;FS=3.122;HRun=8;HaplotypeScore=46.9591;InbreedingCoeff=0.9826;MQ=74.19;MQ0=0;MQRankSum=-0.078;QD=26.90;ReadPosRankSum=0.896;VQSLOD=4.2946;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,13:13:36.06:400,36,0	0/0:8,0:8:24.01:0,24,220	0/0:6,0:7:15:0,15,137	0/0:11,0:11:8.79:0,9,185	1/1:3,21:24:60.13:677,60,0	1/1:3,13:16:36.11:415,36,0	1/1:1,8:9:21.06:242,21,0	0/0:28,0:28:78.03:0,78,711	1/1:2,21:23:57.17:658,57,0	0/0:27,0:27:69.02:0,69,632	0/0:24,1:25:37.42:0,37,597	0/0:19,0:19:51.03:0,51,466	0/0:14,0:14:36.01:0,36,329	0/0:28,0:28:75.03:0,75,682	0/0:20,0:20:57.02:0,57,517	0/0:24,0:24:69.04:0,69,632	1/1:2,22:24:63.19:727,63,0	0/0:18,0:18:42.02:0,42,384	0/0:15,0:15:42.02:0,42,384	0/0:21,0:21:57.03:0,57,522	0/0:20,0:20:54.02:0,54,494	0/0:10,0:10:27.01:0,27,247	0/0:11,0:11:26.99:0,27,241	0/0:14,0:14:35.74:0,36,309	0/0:48,0:48:99:0,135,1218	0/0:23,0:23:66.02:0,66,600	0/0:25,0:25:69.03:0,69,632	0/0:11,0:11:30.01:0,30,274
chr10	34687779	.	C	CT	2624.93	PASS	AB=0.944;AC=20;AF=0.370;AN=54;BaseQRankSum=-1.645;DP=580;FS=4.841;HRun=10;HaplotypeScore=73.1671;InbreedingCoeff=0.8551;MQ=79.51;MQ0=6;MQRankSum=-1.315;QD=11.72;ReadPosRankSum=1.900;VQSLOD=3.4106;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,3:41:65.65:361,66,0	0/0:13,0:13:29.93:0,30,242	0/1:26,0:23:8.82:9,0,185	0/0:23,0:21:7.83:0,8,212	1/1:4,25:29:63.11:653,63,0	1/1:5,18:23:23.48:455,23,0	1/1:5,10:16:26.94:270,27,0	0/0:37,0:38:78.04:0,78,596	1/1:1,5:7:17.91:175,18,0	0/0:24,0:23:62.67:0,63,504	0/0:19,0:19:47.94:0,48,394	1/1:5,0:14:22.62:118,23,0	0/0:22,0:22:53.92:0,54,443	0/0:19,0:19:51.41:0,51,419	0/0:18,0:18:41.89:0,42,338	0/0:22,0:22:56.91:0,57,467	1/1:2,24:27:38.02:633,38,0	0/0:16,0:15:29.05:0,29,245	0/0:30,0:30:65.31:0,65,515	0/0:26,0:26:74.90:0,75,616	0/0:17,0:17:45.81:0,46,367	0/0:18,0:18:53.94:0,54,443	1/1:7,1:11:19.17:113,19,0	1/1:1,0:4:8.52:43,9,0	0/0:27,1:29:35.96:0,36,491	0/0:18,0:20:48.87:0,49,369	0/1:20,3:24:2:2,0,387	./.
chr10	34689372	.	G	GTA	361.65	PASS	AB=0.879;AC=4;AF=0.071;AN=56;BaseQRankSum=-0.998;DP=586;FS=0.851;HRun=0;HaplotypeScore=135.6255;InbreedingCoeff=-0.1011;MQ=45.95;MQ0=49;MQRankSum=-0.471;QD=3.62;ReadPosRankSum=2.377;VQSLOD=2.4229;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:34:41.55:0,42,336	0/0:4,0:4:8.99:0,9,74	0/0:11,0:3:5.92:0,6,39	0/0:19,0:6:11.92:0,12,101	0/0:11,0:11:1.87:0,2,60	0/1:22,1:20:71.95:108,0,72	0/1:25,1:23:99:168,0,154	0/0:22,0:19:45.70:0,46,318	0/1:9,10:18:95.91:124,0,96	0/0:19,0:17:47.90:0,48,429	0/0:19,0:18:8.68:0,9,71	0/0:29,0:27:38.99:0,39,318	0/0:21,0:21:52.44:0,52,358	0/0:21,0:19:24.25:0,24,181	0/0:24,0:23:30.78:0,31,221	0/0:15,0:15:9.09:0,9,102	0/1:30,2:28:70.22:70,0,103	0/0:15,0:12:29.46:0,29,198	0/0:18,0:14:37.23:0,37,246	0/0:24,0:23:11.51:0,12,96	0/0:35,0:32:40:0,40,324	0/0:21,0:19:35.39:0,35,280	0/0:21,0:21:31.44:0,31,255	0/0:24,0:22:39.81:0,40,321	0/0:24,0:23:47.46:0,47,395	0/0:17,0:17:21.98:0,22,233	0/0:16,0:16:21.93:0,22,237	0/0:14,0:9:12.10:0,12,101
chr10	34689380	.	G	GTA	406.82	PASS	AB=0.961;AC=10;AF=0.192;AN=52;BaseQRankSum=-2.738;DP=550;FS=17.752;HRun=0;HaplotypeScore=140.0618;InbreedingCoeff=-0.0812;MQ=46.94;MQ0=43;MQRankSum=-1.267;QD=2.30;ReadPosRankSum=2.974;VQSLOD=1.6987;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:34:38.54:0,39,309	0/0:5,0:5:5.99:0,6,48	./.	./.	0/0:9,0:9:11.95:0,12,96	0/1:21,0:18:15.91:16,0,104	0/1:25,0:23:99:108,0,197	0/0:17,0:14:33.84:0,34,182	0/1:18,0:17:99:121,0,125	0/0:19,0:17:29.82:0,30,354	0/0:17,0:16:8.82:0,9,70	0/0:27,0:26:44.11:0,44,349	0/0:21,0:21:22.64:0,23,273	0/0:22,0:20:24.51:0,25,174	0/0:24,0:23:21.07:0,21,129	1/1:13,1:14:5.53:76,6,0	0/1:20,10:27:71.85:72,0,94	0/1:16,0:13:41.57:42,0,107	0/1:20,0:16:28.41:28,0,131	0/0:23,0:22:5.51:0,6,44	0/0:38,0:34:2.30:0,2,193	0/0:20,0:18:9.64:0,10,212	0/0:21,0:21:31.50:0,32,263	0/0:24,0:22:39.39:0,39,321	0/0:20,0:19:34.67:0,35,274	0/1:13,0:13:56.50:56,0,86	0/1:17,1:18:27.09:27,0,189	0/0:19,0:13:28.91:0,29,184
chr10	34691898	.	G	GTTT	7549.29	PASS	AB=0.902;AC=47;AF=0.839;AN=56;BaseQRankSum=-4.575;DP=667;FS=7.500;HRun=13;HaplotypeScore=118.9720;InbreedingCoeff=0.5982;MQ=68.32;MQ0=5;MQRankSum=-3.861;QD=12.26;ReadPosRankSum=-0.264;VQSLOD=2.7202;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:7,9:18:21.06:333,21,0	1/1:5,9:16:26.98:377,27,0	0/1:43,0:21:11.83:12,0,183	0/1:30,0:20:0.31:0,0,56	1/1:20,1:35:32.53:401,33,0	1/1:12,0:28:14.70:162,15,0	1/1:10,1:14:12.04:183,12,0	1/1:21,2:28:30.06:400,30,0	1/1:12,0:21:15.05:228,15,0	1/1:18,2:31:36.99:487,37,0	1/1:9,4:25:27.88:622,28,0	0/0:7,0:15:17.50:0,18,120	1/1:17,0:27:7.83:61,8,0	1/1:13,5:20:26.98:398,27,0	1/1:14,2:31:24.06:323,24,0	1/1:13,3:24:26.82:381,27,0	1/1:7,1:18:6.99:163,7,0	1/1:6,1:10:6.02:96,6,0	0/1:13,1:18:8.27:247,0,8	1/1:9,6:32:53.94:711,54,0	1/1:4,2:9:11.99:169,12,0	1/1:6,1:14:15:195,15,0	0/0:8,0:19:32.42:0,32,228	0/0:1,0:17:38.29:0,38,243	1/1:18,3:36:36.10:497,36,0	1/1:14,2:33:50.90:602,51,0	1/1:21,1:40:32.78:448,33,0	1/1:9,0:8:3.01:54,3,0
chr10	34693815	.	C	CTT	29170.22	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-8.761;DP=691;FS=2.216;HRun=3;HaplotypeScore=64.4520;InbreedingCoeff=0.9994;MQ=82.67;MQ0=9;MQRankSum=-9.787;QD=44.81;ReadPosRankSum=6.059;VQSLOD=4.0981;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,23:23:57.20:1045,57,0	1/1:1,16:17:39.13:716,39,0	0/0:23,0:23:56.48:0,56,709	0/0:17,0:17:45.09:0,45,585	1/1:4,27:31:78.18:1345,78,0	1/1:4,22:25:54.19:990,54,0	1/1:3,22:25:54.19:990,54,0	1/1:4,41:45:99:2236,123,0	1/1:0,21:21:51.17:935,51,0	1/1:2,35:37:99:1882,105,0	1/1:2,30:31:78.22:1380,78,0	1/1:1,25:26:60.21:1100,60,0	1/1:0,26:26:54.19:987,54,0	1/1:1,30:32:87.30:1575,87,0	1/1:0,20:20:51.17:935,51,0	1/1:1,32:33:81.28:1486,81,0	1/1:1,17:18:45.15:824,45,0	1/1:4,11:15:33.11:579,33,0	1/1:3,20:23:57.17:1010,57,0	1/1:0,40:39:99:2056,114,0	1/1:0,11:12:30.10:550,30,0	1/1:0,19:19:57.15:1010,57,0	1/1:0,16:15:33.10:605,33,0	1/1:0,17:16:42.14:770,42,0	1/1:2,18:21:48.16:880,48,0	1/1:1,24:25:72.23:1288,72,0	1/1:3,26:30:72.20:1281,72,0	1/1:1,16:17:39.13:714,39,0
chr10	34696879	.	C	CAG	29173.79	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-10.463;DP=689;FS=6.434;HRun=0;HaplotypeScore=67.8402;InbreedingCoeff=0.9965;MQ=88.83;MQ0=3;MQRankSum=-11.493;QD=46.16;ReadPosRankSum=6.763;VQSLOD=6.0240;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,15:17:36.12:648,36,0	1/1:0,9:9:24.08:429,24,0	0/0:30,0:29:72.24:0,72,991	0/0:27,0:27:72.23:0,72,984	1/1:3,25:28:66.23:1188,66,0	1/1:0,26:26:69.24:1243,69,0	1/1:1,15:17:39.13:702,39,0	1/1:2,32:36:96.30:1663,96,0	1/1:0,15:15:39.13:702,39,0	1/1:1,29:30:87.30:1550,87,0	1/1:2,19:22:54.19:972,54,0	1/1:2,18:20:48.16:864,48,0	1/1:2,28:30:81.28:1451,81,0	1/1:0,22:22:63.22:1130,63,0	1/1:1,33:35:93.32:1675,93,0	1/1:1,35:37:99:1783,99,0	1/1:0,18:19:51.17:919,51,0	1/1:0,11:11:30.10:540,30,0	1/1:2,16:18:48.14:832,48,0	1/1:2,29:32:81.28:1459,81,0	1/1:1,30:30:75.26:1351,75,0	1/1:2,25:27:69.24:1243,69,0	1/1:0,21:22:60.21:1081,60,0	1/1:1,20:21:60.21:1081,60,0	1/1:1,32:34:81.28:1457,81,0	1/1:4,31:35:93.32:1665,93,0	1/1:4,24:28:66.14:1170,66,0	1/1:0,7:7:21.07:378,21,0
chr10	34697423	.	TA	T	11715.58	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-3.801;DP=474;FS=5.335;HRun=6;HaplotypeScore=55.5673;InbreedingCoeff=0.9773;MQ=77.00;MQ0=1;MQRankSum=-6.289;QD=27.18;ReadPosRankSum=4.810;VQSLOD=5.2303;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,13:13:39.10:417,39,0	1/1:1,8:9:21.05:226,21,0	0/0:15,0:15:29.98:0,30,333	0/0:28,0:25:23.13:0,23,382	1/1:0,25:25:75.19:803,75,0	1/1:0,25:25:63.16:677,63,0	1/1:0,5:5:15.04:161,15,0	1/1:6,31:37:88.76:931,89,0	1/1:2,7:9:18.04:193,18,0	1/1:1,16:17:48.10:507,48,0	1/1:1,10:11:30.07:318,30,0	1/1:2,12:14:33.08:355,33,0	1/1:1,11:12:30.08:322,30,0	1/1:1,12:13:30.07:322,30,0	1/1:2,25:27:63.16:677,63,0	1/1:1,14:15:36.09:387,36,0	1/1:2,13:15:39.10:419,39,0	1/1:1,9:10:27.07:290,27,0	1/1:1,15:16:45.05:464,45,0	1/1:2,28:30:78.13:822,78,0	1/1:1,7:8:18.04:193,18,0	1/1:1,10:11:27.07:290,27,0	1/1:1,12:13:30.07:322,30,0	1/1:0,14:14:39.10:419,39,0	1/1:3,25:28:75.11:781,75,0	1/1:0,16:16:48.12:516,48,0	1/1:3,25:28:57.14:613,57,0	1/1:1,9:10:27.07:290,27,0
chr10	34697801	.	G	GTA	27053.74	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=0.227;DP=619;FS=16.591;HRun=0;HaplotypeScore=89.3076;InbreedingCoeff=0.9828;MQ=80.61;MQ0=0;MQRankSum=-9.892;QD=46.48;ReadPosRankSum=5.615;VQSLOD=4.8650;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,12:15:33.11:617,33,0	1/1:0,11:11:27.09:504,27,0	0/0:18,0:18:49.72:0,50,700	0/0:19,0:19:52.07:0,52,687	1/1:1,24:25:63.21:1158,63,0	1/1:2,22:26:57.20:1067,57,0	1/1:0,13:13:30.10:562,30,0	1/1:7,43:48:99:2286,141,0	1/1:1,16:17:45.15:843,45,0	1/1:2,31:33:96.29:1745,96,0	1/1:1,20:21:57.20:1064,57,0	1/1:1,21:22:60.21:1123,60,0	1/1:2,23:25:63.21:1157,63,0	1/1:0,20:20:51.17:953,51,0	1/1:1,26:27:72.25:1342,72,0	1/1:1,35:37:93.32:1738,93,0	1/1:0,35:35:93.32:1739,93,0	1/1:3,18:21:57.19:1045,57,0	1/1:2,10:11:30.10:561,30,0	1/1:2,26:27:63.22:1176,63,0	1/1:1,19:20:45.15:841,45,0	1/1:4,12:16:30.10:561,30,0	1/1:0,13:13:36.12:650,36,0	1/1:1,14:15:33.11:618,33,0	1/1:0,18:18:54.19:1009,54,0	1/1:2,23:25:75.24:1353,75,0	1/1:5,19:25:60.21:1118,60,0	1/1:0,4:6:12.04:224,12,0
chr10	34698731	.	C	CA	13622.42	PASS	AB=0.551;AC=49;AF=0.875;AN=56;BaseQRankSum=-6.925;DP=682;FS=0.000;HRun=10;HaplotypeScore=72.6753;InbreedingCoeff=0.5509;MQ=79.66;MQ0=0;MQRankSum=-4.014;QD=20.93;ReadPosRankSum=3.261;VQSLOD=5.6880;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,2:22:28.68:153,29,0	1/1:3,13:16:30.08:320,30,0	0/0:20,0:21:28.49:0,28,221	0/0:9,1:10:14.28:0,14,114	1/1:2,22:26:47.05:627,47,0	1/1:9,24:34:44.37:661,44,0	1/1:3,17:20:42.11:448,42,0	1/1:12,26:38:50.47:716,50,0	1/1:0,20:20:54.14:576,54,0	1/1:9,18:27:48.06:484,48,0	1/1:4,26:30:34.90:762,35,0	1/1:6,23:29:57.14:606,57,0	0/1:4,18:22:1.18:392,0,1	0/1:4,18:23:1.17:400,0,1	1/1:3,31:35:80.86:839,81,0	1/1:4,28:32:66.17:704,66,0	1/1:2,12:14:11.45:327,11,0	1/1:3,19:23:38.27:442,38,0	1/1:5,16:21:48.10:502,48,0	1/1:6,24:30:69.05:699,69,0	1/1:2,8:12:26.73:252,27,0	1/1:4,20:24:60.09:614,60,0	1/1:3,18:22:42.85:432,43,0	1/1:4,17:21:45.11:480,45,0	0/1:6,24:30:7.78:535,0,8	1/1:9,21:31:22.76:637,23,0	1/1:8,32:39:0.67:829,1,0	1/1:3,6:9:18.03:185,18,0
chr10	34699115	.	A	ATT	5330.58	PASS	AB=0.500;AC=43;AF=0.768;AN=56;BaseQRankSum=3.327;DP=561;FS=3.257;HRun=9;HaplotypeScore=87.5414;InbreedingCoeff=0.8994;MQ=74.90;MQ0=1;MQRankSum=-2.389;QD=11.90;ReadPosRankSum=3.108;VQSLOD=2.4280;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:60.09:0,60,629	0/1:0,0:5:1.01:15,0,1	0/0:21,0:18:9.90:0,10,265	0/0:12,0:9:6.90:0,7,170	1/1:1,19:20:57.16:852,57,0	1/1:5,14:19:36.12:553,36,0	1/1:1,11:13:24.08:370,24,0	1/1:9,0:39:75.52:305,76,0	1/1:3,11:14:21.07:323,21,0	1/1:1,0:23:21.77:156,22,0	1/1:2,0:29:49.56:186,50,0	0/0:19,0:19:48.08:0,48,494	1/1:3,0:17:29.82:102,30,0	1/1:2,0:21:39.80:137,40,0	1/1:5,0:27:47.41:163,47,0	1/1:4,0:24:44.92:154,45,0	1/1:6,21:29:63.94:918,64,0	1/1:2,0:12:19.86:68,20,0	1/1:2,0:14:24.67:96,25,0	1/1:4,0:27:40.82:142,41,0	1/1:1,0:12:22.46:77,22,0	1/1:4,0:11:8.94:32,9,0	0/0:24,0:24:63.12:0,63,662	0/0:12,0:12:27.03:0,27,287	1/1:0,1:22:47.93:200,48,0	1/1:5,0:24:48.03:181,48,0	1/1:3,0:34:43.68:232,44,0	1/1:4,0:12:19.96:69,20,0
chr10	34700389	.	CA	C	2997.73	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=10.151;DP=716;FS=2.055;HRun=1;HaplotypeScore=67.4989;InbreedingCoeff=0.9970;MQ=89.93;MQ0=0;MQRankSum=-3.720;QD=37.47;ReadPosRankSum=2.240;VQSLOD=4.3099;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:84.26:0,84,1288	0/0:12,0:12:36.07:0,36,524	0/0:31,0:31:90.26:0,90,1343	0/0:24,0:24:66.19:0,66,963	0/0:28,0:28:84.27:0,84,1304	0/0:28,0:28:84.27:0,84,1316	0/0:21,0:21:63.19:0,63,973	0/0:32,0:32:90.30:0,90,1411	0/0:17,0:17:48.15:0,48,743	0/0:31,0:31:90.30:0,90,1413	0/0:11,0:11:33.11:0,33,521	1/1:0,30:30:90.30:1255,90,0	0/0:26,0:26:78.25:0,78,1222	0/0:17,0:17:45.15:0,45,720	0/0:27,0:27:81.28:0,81,1293	0/0:34,0:34:99:0,102,1631	0/0:18,0:18:54.18:0,54,863	0/0:25,0:25:75.26:0,75,1187	0/0:21,0:21:63.20:0,63,981	0/0:26,0:26:78.27:0,78,1231	0/0:43,0:43:99:0,129,2010	0/0:20,0:20:60.20:0,60,959	1/1:0,18:18:51.13:713,51,0	1/1:0,32:32:84.28:1173,84,0	0/0:36,0:36:99:0,105,1678	0/0:35,0:35:99:0,105,1650	0/0:39,0:39:99:0,117,1854	0/0:6,0:6:18.06:0,18,288
chr10	34701024	.	AACACACACACACACACACACAC	A	9778.87	PASS	AB=0.796;AC=33;AF=0.611;AN=54;BaseQRankSum=8.103;DP=555;FS=11.698;HRun=0;HaplotypeScore=294.6027;InbreedingCoeff=0.1026;MQ=56.07;MQ0=18;MQRankSum=-3.603;QD=22.79;ReadPosRankSum=0.240;VQSLOD=2.0173;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:30:33.11:0,33,1623	1/1:6,1:8:6.02:327,6,0	./.	0/0:23,0:13:11.23:0,11,134	0/1:11,0:23:11.21:328,0,11	0/1:11,4:18:11.09:906,0,11	0/1:17,0:14:16.98:17,0,17	0/1:32,0:32:11.60:181,0,12	0/1:9,0:18:10.94:321,0,11	0/1:14,7:21:34.84:396,0,35	1/1:7,9:17:15.01:713,15,0	0/0:22,0:22:39.13:0,39,2914	0/1:15,6:21:1.82:678,0,2	1/1:12,2:17:24.07:950,24,0	0/1:19,2:20:53.48:400,0,53	1/1:16,12:28:23.81:1384,24,0	0/1:17,0:22:99:101,0,108	1/1:7,0:5:2.97:20,3,0	0/1:12,4:16:35.72:220,0,36	1/1:14,3:17:6.45:192,6,0	1/1:24,0:23:5.79:37,6,0	1/1:16,8:25:15.05:752,15,0	0/0:14,0:14:12.04:0,12,950	0/0:18,0:18:30.08:0,30,2012	0/1:8,8:17:5.47:324,0,5	1/1:18,11:28:28.85:517,29,0	1/1:12,13:25:11.41:861,11,0	1/1:5,0:5:3.01:153,3,0
chr10	34705474	.	CG	C	2178.26	PASS	AB=0.828;AC=31;AF=0.596;AN=52;BaseQRankSum=-0.496;DP=390;FS=38.637;HRun=11;HaplotypeScore=56.2384;InbreedingCoeff=0.5463;MQ=71.61;MQ0=0;MQRankSum=-1.072;QD=8.41;ReadPosRankSum=6.719;VQSLOD=-0.5589;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:24:4.80:0,5,108	1/1:3,1:4:8.98:73,9,0	0/1:9,1:9:32.01:32,0,52	0/0:13,1:13:8.15:0,8,56	./.	0/1:13,0:14:0:0,0,0	0/0:12,0:12:6.39:0,6,40	0/1:10,5:15:17.02:84,0,17	0/0:13,0:17:27.02:0,27,182	1/1:14,3:18:23:176,23,0	1/1:6,0:6:4.06:12,4,0	0/0:24,1:26:11.46:0,11,215	1/1:14,1:15:8.92:74,9,0	1/1:15,3:19:25.01:184,25,0	1/1:11,8:20:31.95:251,32,0	1/1:5,4:11:22.04:159,22,0	0/0:12,0:13:17.78:0,18,136	0/1:8,7:15:1.04:148,0,1	0/1:6,0:8:7.85:34,0,8	1/1:8,1:9:14.96:120,15,0	1/1:27,22:52:68.05:514,68,0	1/1:4,4:8:14.98:123,15,0	./.	0/0:9,0:18:2.84:0,3,14	1/1:8,3:11:18.85:149,19,0	1/1:6,3:10:14:104,14,0	1/1:12,2:14:14.93:118,15,0	0/0:2,0:2:5.97:0,6,44
chr10	34705567	.	ATG	A	8508.78	PASS	AB=0.707;AC=36;AF=0.643;AN=56;BaseQRankSum=7.345;DP=671;FS=2.690;HRun=0;HaplotypeScore=89.1988;InbreedingCoeff=0.7709;MQ=52.68;MQ0=26;MQRankSum=-1.147;QD=19.70;ReadPosRankSum=-1.501;VQSLOD=4.3870;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:93.23:0,93,1457	1/1:0,5:5:15.05:183,15,0	0/0:17,0:8:12.51:0,13,186	0/0:33,0:5:5.75:0,6,61	0/0:7,0:15:25.13:0,25,397	0/0:13,0:21:4.30:0,4,564	0/1:19,0:35:29.01:29,0,509	1/1:15,19:32:32.81:598,33,0	0/1:15,0:23:12.53:13,0,483	1/1:7,20:24:19.91:632,20,0	1/1:1,10:11:24.03:279,24,0	0/0:29,0:28:57.14:0,57,876	1/1:6,21:27:30.10:375,30,0	1/1:15,12:25:51.16:631,51,0	1/1:12,14:26:64.94:790,65,0	1/1:4,26:30:42.44:503,42,0	0/0:19,0:29:4.14:0,4,564	1/1:16,12:20:48.10:567,48,0	1/1:8,7:12:15:170,15,0	1/1:0,9:9:18.06:225,18,0	1/1:22,31:50:99:1661,135,0	1/1:2,11:13:23.94:277,24,0	0/0:22,0:22:16.26:0,16,752	0/0:38,0:38:99:0,108,1690	1/1:1,9:8:24.08:300,24,0	1/1:3,17:19:47.88:565,48,0	1/1:2,27:24:39.12:486,39,0	1/1:0,8:8:18.06:225,18,0
chr10	34705581	.	GTTTA	G	436.40	PASS	AB=0.835;AC=3;AF=0.054;AN=56;BaseQRankSum=5.411;DP=712;FS=3.690;HRun=0;HaplotypeScore=146.3864;InbreedingCoeff=-0.0675;MQ=52.82;MQ0=23;MQRankSum=-7.280;QD=3.76;ReadPosRankSum=-1.589;VQSLOD=2.5336;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,114,2598	0/0:5,0:5:13.86:0,14,172	0/1:19,15:14:99:295,0,248	0/1:35,10:11:99:224,0,103	0/0:17,0:17:38.11:0,38,635	0/0:20,0:20:31.36:0,31,913	0/1:36,0:36:14.98:15,0,856	0/0:36,0:34:73.32:0,73,1143	0/0:23,0:22:21.53:0,22,815	0/0:23,0:22:56.32:0,56,787	0/0:12,0:12:24.96:0,25,378	0/0:25,0:25:72.21:0,72,1669	0/0:28,0:28:47.65:0,48,711	0/0:26,0:24:56.76:0,57,762	0/0:28,0:28:80.96:0,81,1140	0/0:30,0:29:45.49:0,45,637	0/0:27,0:27:28.26:0,28,697	0/0:29,0:21:53.15:0,53,774	0/0:18,0:15:35.22:0,35,523	0/0:11,0:11:18.26:0,18,390	0/0:60,0:58:99:0,160,2164	0/0:14,0:14:32.95:0,33,413	0/0:21,0:21:59.89:0,60,1361	0/0:36,0:36:99:0,105,2755	0/0:13,0:10:32.32:0,32,457	0/0:19,0:18:11.64:0,12,588	0/0:27,0:23:1.32:0,1,399	0/0:8,0:8:18.06:0,18,251
chr10	34705944	.	AT	A	5781.60	PASS	AB=1.000;AC=35;AF=0.625;AN=56;BaseQRankSum=1.776;DP=607;FS=8.562;HRun=13;HaplotypeScore=117.3046;InbreedingCoeff=0.9211;MQ=69.59;MQ0=1;MQRankSum=1.313;QD=13.73;ReadPosRankSum=1.280;VQSLOD=4.0176;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:23:23.97:0,24,118	1/1:1,13:14:38.78:284,39,0	0/0:12,0:10:7.18:0,7,39	0/1:14,0:13:3.14:3,0,12	0/0:13,0:16:24.17:0,24,199	0/0:29,1:30:44.18:0,44,582	0/0:14,1:15:20.14:0,20,351	1/1:10,26:36:74.40:544,74,0	0/0:20,0:20:39.05:0,39,375	1/1:13,25:38:65.52:481,66,0	1/1:6,13:20:40.74:290,41,0	0/0:8,0:20:26.17:0,26,178	1/1:4,17:22:43.76:312,44,0	1/1:5,13:19:37.81:268,38,0	1/1:14,21:35:24.44:342,24,0	1/1:3,20:24:64.67:465,65,0	0/0:11,1:12:8.14:0,8,241	1/1:4,17:21:44.35:324,44,0	1/1:10,10:21:31.76:225,32,0	1/1:5,14:20:31.78:225,32,0	1/1:2,6:8:14.90:109,15,0	1/1:3,12:16:34.42:246,34,0	0/0:7,0:25:37.71:0,38,210	0/0:4,0:13:20:0,20,116	1/1:9,17:26:15.52:277,16,0	1/1:6,24:31:67.55:487,68,0	1/1:5,31:36:83.48:613,83,0	1/1:4,16:20:38.77:285,39,0
chr10	34706759	.	T	TC	2079.43	PASS	AB=0.930;AC=47;AF=0.904;AN=52;BaseQRankSum=-3.238;DP=137;FS=10.985;HRun=6;HaplotypeScore=104.8461;InbreedingCoeff=0.0602;MQ=67.32;MQ0=5;MQRankSum=-1.661;QD=15.63;ReadPosRankSum=-2.060;VQSLOD=2.0664;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,0:4:11.95:108,12,0	1/1:1,0:1:1.25:3,1,0	1/1:3,0:1:0.47:1,0,0	0/1:8,0:7:18.09:18,0,43	0/1:1,0:1:0:0,0,0	1/1:4,0:4:8.05:75,8,0	1/1:8,1:9:7.92:135,8,0	1/1:6,2:9:7.36:102,7,0	1/1:3,0:3:8.90:66,9,0	1/1:1,4:5:4.05:62,4,0	1/1:1,2:3:6.02:71,6,0	1/1:6,0:6:17.07:116,17,0	1/1:5,0:5:10.27:108,10,0	1/1:6,1:9:20.95:223,21,0	1/1:4,0:4:7.46:110,7,0	0/1:6,0:6:5.28:94,0,5	0/1:5,0:5:1.01:44,0,1	1/1:2,2:4:6.01:65,6,0	1/1:1,0:1:3.01:34,3,0	./.	1/1:10,4:16:25.65:254,26,0	1/1:2,0:2:3.01:34,3,0	1/1:4,0:4:9.02:94,9,0	1/1:3,3:6:14.53:148,15,0	0/1:4,2:6:1.79:36,0,2	1/1:2,0:2:6.02:71,6,0	1/1:4,0:4:11.85:98,12,0	./.
chr10	34708072	.	GT	G	9792.30	PASS	AB=0.691;AC=49;AF=0.875;AN=56;BaseQRankSum=3.832;DP=714;FS=5.714;HRun=12;HaplotypeScore=80.6208;InbreedingCoeff=0.4917;MQ=73.10;MQ0=1;MQRankSum=-0.596;QD=15.21;ReadPosRankSum=2.431;VQSLOD=5.8078;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,1:40:69.59:0,70,849	1/1:1,8:9:17.56:139,18,0	0/0:28,1:23:15.32:0,15,169	0/1:11,1:10:7.67:8,0,92	1/1:7,20:28:33.57:397,34,0	0/1:4,11:17:17.95:224,0,18	1/1:0,17:18:49.85:377,50,0	1/1:3,29:34:28.36:535,28,0	1/1:3,15:18:11.40:271,11,0	1/1:9,16:25:42.38:344,42,0	1/1:8,15:25:15.44:283,15,0	1/1:2,25:27:68.71:532,69,0	1/1:4,23:29:63.77:476,64,0	1/1:3,17:20:20.37:341,20,0	1/1:10,35:46:96.66:732,97,0	1/1:5,28:34:34.16:439,34,0	1/1:6,35:41:62.18:666,62,0	0/1:6,15:21:41.43:257,0,41	1/1:4,10:17:32.95:224,33,0	1/1:8,31:39:81.79:661,82,0	1/1:1,17:19:55.83:424,56,0	1/1:2,12:16:6.50:213,6,0	1/1:4,14:19:37.88:284,38,0	1/1:2,22:25:61.79:470,62,0	1/1:4,23:29:56.91:412,57,0	1/1:8,24:33:67.74:493,68,0	1/1:3,27:30:7.84:427,8,0	1/1:0,13:13:20.92:163,21,0
chr10	34709930	.	AAAC	A	19952.47	PASS	AB=0.523;AC=33;AF=0.589;AN=56;BaseQRankSum=14.462;DP=834;FS=7.075;HRun=0;HaplotypeScore=147.2962;InbreedingCoeff=0.9308;MQ=87.86;MQ0=0;MQRankSum=-7.605;QD=45.66;ReadPosRankSum=2.824;VQSLOD=6.7622;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,166,3896	1/1:1,12:13:36.08:602,36,0	0/0:33,0:33:99:0,99,1938	0/0:35,0:35:99:0,102,1978	0/0:14,0:14:39.13:0,39,922	0/0:37,0:37:99:0,108,2486	0/0:40,0:40:99:0,120,2730	1/1:1,15:16:39.13:685,39,0	0/0:36,0:36:99:0,108,2536	1/1:1,35:36:96.31:1656,96,0	1/1:1,20:21:48.16:844,48,0	0/0:50,0:50:99:0,151,3526	1/1:1,40:41:99:1884,108,0	1/1:2,30:32:81.28:1428,81,0	1/1:1,40:41:99:2010,114,0	1/1:1,35:36:96.33:1691,96,0	0/0:38,0:38:99:0,114,2495	1/1:0,14:14:27.09:476,27,0	1/1:0,9:9:24.04:387,24,0	0/1:2,21:23:10.76:945,0,11	1/1:1,40:41:99:1747,99,0	1/1:0,19:19:54.18:952,54,0	0/0:18,0:18:51.17:0,51,1104	0/0:41,0:41:99:0,123,2884	1/1:0,25:25:69.24:1217,69,0	1/1:0,32:32:96.33:1686,96,0	1/1:0,30:30:76.80:1373,77,0	1/1:0,8:8:21.07:370,21,0
chr10	34710841	.	C	CAAAAAAAA	8057.61	PASS	AB=0.775;AC=46;AF=0.821;AN=56;BaseQRankSum=4.410;DP=598;FS=0.987;HRun=11;HaplotypeScore=139.3155;InbreedingCoeff=0.6770;MQ=69.94;MQ0=23;MQRankSum=-8.310;QD=17.71;ReadPosRankSum=-3.045;VQSLOD=1.1058;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,0:20:15.05:353,15,0	1/1:7,0:7:7.99:50,8,0	0/0:58,0:28:1.33:0,1,202	0/1:52,0:23:17.46:17,0,119	1/1:16,0:17:30.07:519,30,0	1/1:4,11:18:12.04:373,12,0	1/1:2,9:14:9:189,9,0	1/1:25,0:21:27.09:479,27,0	1/1:9,0:8:21.04:357,21,0	1/1:16,0:14:28.52:286,29,0	1/1:15,0:15:24.48:266,24,0	0/0:32,0:32:83.19:0,83,1471	1/1:10,0:7:15.49:252,15,0	1/1:18,0:17:24.07:348,24,0	1/1:25,1:24:42:642,42,0	1/1:28,0:24:45.06:500,45,0	1/1:21,0:22:45.14:758,45,0	1/1:14,0:12:16.29:288,16,0	1/1:3,2:20:50.52:1025,51,0	1/1:25,0:18:31:314,31,0	1/1:6,0:5:5.51:63,6,0	1/1:3,1:11:6.02:152,6,0	0/0:25,0:26:51.28:0,51,1127	0/0:25,0:25:69.07:0,69,1353	0/1:4,0:21:0:0,0,0	1/1:24,0:19:45.39:534,45,0	1/1:19,0:16:22.64:192,23,0	1/1:6,0:9:6.02:97,6,0
chr10	34712194	.	C	CCGCGCAG	1039	PASS	AC=2;AF=0.037;AN=54;BaseQRankSum=-1.655;DP=330;FS=7.654;HRun=0;HaplotypeScore=81.5190;InbreedingCoeff=0.5539;MQ=63.36;MQ0=1;MQRankSum=-5.271;QD=45.17;ReadPosRankSum=-0.227;VQSLOD=2.5632;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,13:22:30.10:1133,30,0	0/0:4,0:4:12.04:0,12,253	./.	0/0:3,0:3:6.02:0,6,104	0/0:5,0:5:12.04:0,12,288	0/0:12,0:12:30.10:0,30,720	0/0:16,0:16:30.09:0,30,641	0/0:16,0:16:27.09:0,27,611	0/0:4,0:4:12.04:0,12,288	0/0:7,0:7:12.04:0,12,289	0/0:5,0:5:9.03:0,9,216	0/0:14,0:13:30.09:0,30,658	0/0:10,0:10:27.09:0,27,637	0/0:6,0:6:15.05:0,15,361	0/0:5,0:5:12.03:0,12,241	0/0:11,0:11:27.07:0,27,580	0/0:27,0:27:76.14:0,76,1805	0/0:33,0:33:93.32:0,93,2203	0/0:11,0:11:24.08:0,24,546	0/0:5,0:5:12.04:0,12,289	0/0:39,0:39:99:0,99,2179	0/0:3,0:3:9.03:0,9,192	0/0:2,0:2:2.88:0,3,67	0/0:30,0:30:87.28:0,87,2000	0/0:21,0:21:57.18:0,57,1295	0/0:6,0:6:12.04:0,12,289	0/0:6,0:6:18.06:0,18,432	0/0:4,0:4:6.02:0,6,144
chr10	34712337	.	CG	C	1864.34	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=7.407;DP=457;FS=2.500;HRun=3;HaplotypeScore=45.2814;InbreedingCoeff=0.9836;MQ=79.43;MQ0=0;MQRankSum=-1.006;QD=31.60;ReadPosRankSum=2.088;VQSLOD=3.5350;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:66.21:0,66,931	0/0:5,0:5:15.05:0,15,214	0/0:10,0:10:29.82:0,30,349	0/0:15,0:15:45.14:0,45,614	0/0:21,0:21:63.21:0,63,898	0/0:13,0:13:39.13:0,39,561	0/0:26,0:26:75.24:0,75,1060	0/0:21,0:21:60.19:0,60,842	0/0:10,0:10:27.09:0,27,388	0/0:16,0:16:45.15:0,45,648	0/0:9,0:9:21.06:0,21,283	1/1:0,21:21:51.16:632,51,0	0/0:10,0:10:30.10:0,30,432	0/0:11,0:11:33.11:0,33,475	0/0:17,0:17:51.17:0,51,733	0/0:5,0:5:15.05:0,15,216	0/0:29,0:29:84.28:0,84,1207	0/0:29,0:29:84.28:0,84,1209	0/0:15,0:15:39.13:0,39,561	0/0:14,0:14:42.11:0,42,567	0/0:42,0:42:99:0,120,1684	0/0:14,0:14:42.14:0,42,605	1/1:0,8:8:24.08:297,24,0	1/1:0,30:30:87.27:1078,87,0	0/0:9,0:9:27.09:0,27,388	0/0:19,0:19:51.13:0,51,680	0/0:9,0:9:27.07:0,27,369	0/0:7,0:7:21.07:0,21,302
chr10	34714132	.	T	TA	10413.28	PASS	AB=0.563;AC=33;AF=0.589;AN=56;BaseQRankSum=-14.438;DP=675;FS=4.949;HRun=9;HaplotypeScore=65.7131;InbreedingCoeff=0.9265;MQ=74.38;MQ0=0;MQRankSum=-2.110;QD=24.27;ReadPosRankSum=0.538;VQSLOD=5.7397;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,1:38:64.81:0,65,770	1/1:0,14:14:29.16:314,29,0	0/0:18,0:19:40.28:0,40,306	0/0:11,0:10:5.59:0,6,59	0/0:29,0:30:61.98:0,62,518	0/0:30,0:31:76.99:0,77,650	0/0:13,0:13:35.97:0,36,308	1/1:6,34:40:99:1096,102,0	0/0:17,0:17:41.98:0,42,365	1/1:6,25:31:54.01:798,54,0	1/1:2,17:19:51.14:563,51,0	0/0:25,0:25:59.97:0,60,518	1/1:4,24:28:63.17:697,63,0	1/1:5,18:23:42.11:465,42,0	1/1:9,25:34:37.12:638,37,0	1/1:7,24:31:57.15:631,57,0	0/0:30,0:30:65.93:0,66,568	1/1:3,21:24:51.14:564,51,0	0/1:4,14:18:3.91:409,0,4	1/1:3,30:33:55.95:809,56,0	1/1:2,23:25:63.17:697,63,0	1/1:4,25:29:63.05:712,63,0	0/0:19,0:19:41.93:0,42,357	0/0:13,0:13:32.93:0,33,275	1/1:1,17:18:48.13:531,48,0	1/1:3,24:27:70.11:785,70,0	1/1:2,26:28:31.99:573,32,0	1/1:3,4:7:12.03:133,12,0
chr10	34715533	.	GGGGTACT	G	32362.24	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=14.403;DP=734;FS=4.099;HRun=0;HaplotypeScore=200.9624;InbreedingCoeff=0.9903;MQ=78.83;MQ0=1;MQRankSum=-17.245;QD=56.78;ReadPosRankSum=3.901;VQSLOD=4.8924;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,24:31:66.23:1675,66,0	1/1:0,11:11:24.08:609,24,0	0/0:34,0:34:90.78:0,91,3134	0/0:26,0:26:60.13:0,60,2095	1/1:4,14:18:35.91:912,36,0	1/1:3,21:24:54.19:1370,54,0	1/1:5,16:21:45.15:1141,45,0	1/1:10,31:41:81.25:2250,81,0	1/1:2,24:26:66.23:1675,66,0	1/1:7,17:24:51.12:1186,51,0	1/1:5,17:22:51.18:1293,51,0	0/0:40,1:41:38.33:0,38,4125	1/1:3,23:26:60.21:1522,60,0	1/1:4,24:28:69.24:1735,69,0	1/1:6,43:49:99:2663,105,0	1/1:4,43:47:99:2664,105,0	1/1:3,20:23:48.16:1178,48,0	1/1:5,6:11:15.05:381,15,0	1/1:4,5:9:15.05:381,15,0	1/1:3,21:24:60.16:1461,60,0	1/1:4,19:23:45.15:1142,45,0	1/1:3,21:24:63.22:1597,63,0	0/0:32,0:32:96.30:0,96,3669	0/0:31,0:30:84.29:0,84,3118	1/1:3,33:36:93.32:2359,93,0	1/1:3,20:23:60.21:1493,60,0	1/1:4,17:21:48.16:1218,48,0	1/1:0,7:7:18.06:457,18,0
chr10	34715534	.	GGGTACT	G	17066.98	PASS	AB=0.993;AC=40;AF=0.714;AN=56;BaseQRankSum=18.384;DP=728;FS=3.170;HRun=0;HaplotypeScore=238.3921;InbreedingCoeff=0.4513;MQ=78.45;MQ0=1;MQRankSum=-17.003;QD=30.21;ReadPosRankSum=6.486;VQSLOD=4.0703;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:31,0:31:35.33:893,35,0	1/1:11,0:11:24.08:337,24,0	0/0:33,0:33:93.77:0,94,2952	0/0:26,0:26:66.20:0,66,2040	1/1:17,1:18:6.13:472,6,0	1/1:24,0:24:2.85:701,3,0	1/1:21,0:21:15.95:599,16,0	0/1:40,0:40:72.56:1134,0,73	1/1:26,0:26:28.83:884,29,0	0/1:24,0:24:61.55:570,0,62	0/1:22,0:22:7.21:659,0,7	0/0:41,0:41:75.31:0,75,3851	1/1:27,0:26:29.28:808,29,0	1/1:28,0:28:39.67:926,40,0	1/1:48,0:48:74.43:1441,74,0	1/1:47,0:47:75.57:1442,76,0	1/1:23,0:23:48.07:649,48,0	0/1:11,0:11:75.75:187,0,76	0/1:8,0:8:43.89:190,0,44	0/1:22,1:23:10.93:730,0,11	1/1:22,0:22:45.15:632,45,0	1/1:23,1:24:33.70:852,34,0	0/0:32,0:32:96.33:0,96,3368	0/0:31,0:30:90.31:0,90,2981	1/1:36,0:36:62.62:1273,63,0	1/1:23,0:23:30.38:781,30,0	1/1:20,1:21:31.34:655,31,0	1/1:7,0:7:18.06:253,18,0
chr10	34716587	.	T	TTC	6876.07	PASS	AB=0.693;AC=24;AF=0.429;AN=56;BaseQRankSum=-12.124;DP=610;FS=0.410;HRun=0;HaplotypeScore=97.4056;InbreedingCoeff=0.2804;MQ=68.05;MQ0=5;MQRankSum=0.563;QD=18.14;ReadPosRankSum=-0.972;VQSLOD=4.6560;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:14:22.73:0,23,112	0/0:12,0:12:24.07:0,24,276	0/0:26,1:16:6.06:0,6,95	0/1:28,0:16:1.24:1,0,18	0/0:7,0:18:28.41:0,28,140	0/0:3,0:19:28.41:0,28,140	0/0:10,0:24:34.24:0,34,179	1/1:19,13:32:22.72:558,23,0	0/0:4,0:17:34.09:0,34,168	0/1:5,8:15:4.40:364,0,4	1/1:0,5:5:15.05:233,15,0	0/0:11,1:32:6.46:0,6,195	0/1:9,3:30:15.34:383,0,15	0/1:14,20:36:99:715,0,139	1/1:13,13:27:39.13:601,39,0	0/1:9,23:35:7.89:947,0,8	0/0:8,0:27:36.46:0,36,176	1/1:6,13:20:5.28:491,5,0	0/1:11,1:12:56.94:80,0,57	1/1:4,12:17:33.11:511,33,0	0/1:16,11:27:47.45:324,0,47	0/1:5,10:16:18.54:342,0,19	0/0:5,0:17:25.40:0,25,123	0/0:4,0:23:48.29:0,48,238	0/1:7,8:15:47.92:211,0,48	1/1:13,13:27:14.33:632,14,0	0/1:9,12:21:41.90:298,0,42	1/1:6,8:14:12.04:186,12,0
chr10	34719001	.	AGAG	A	142.71	PASS	AB=1.000;AC=17;AF=0.425;AN=40;BaseQRankSum=5.465;DP=277;FS=11.389;HRun=0;HaplotypeScore=55.8913;InbreedingCoeff=0.6329;MQ=112.89;MQ0=0;MQRankSum=-3.339;QD=8.39;ReadPosRankSum=-4.774;VQSLOD=-0.5306;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,102,2357	./.	0/0:23,0:24:62.61:0,63,1144	0/0:29,0:29:69.24:0,69,1723	0/0:26,0:26:72.25:0,72,1699	0/0:22,0:22:66.23:0,66,1558	0/0:21,0:21:63.19:0,63,1394	./.	0/0:19,0:19:57.18:0,57,1278	1/1:1,0:1:3:27,3,0	1/1:3,0:3:8.97:72,9,0	0/0:18,0:18:54.19:0,54,1255	1/1:0,2:2:3.01:53,3,0	1/1:0,3:3:2.94:18,3,0	./.	0/1:3,0:3:11.98:12,0,44	0/0:32,0:32:93.27:0,93,2058	1/1:1,0:1:2.97:20,3,0	./.	./.	1/1:2,0:2:2.97:20,3,0	./.	0/0:16,0:16:45.15:0,45,1042	0/0:18,0:18:45.15:0,45,1058	1/1:1,0:1:2.96:19,3,0	./.	1/1:1,0:1:3.01:45,3,0	./.
chr10	34719596	.	AT	A	10090.45	PASS	AB=0.766;AC=46;AF=0.821;AN=56;BaseQRankSum=-9.506;DP=677;FS=6.648;HRun=11;HaplotypeScore=79.6764;InbreedingCoeff=0.7463;MQ=75.12;MQ0=3;MQRankSum=0.339;QD=16.99;ReadPosRankSum=4.033;VQSLOD=5.7899;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,28:31:31.13:461,31,0	1/1:1,12:13:29.96:246,30,0	0/1:31,1:22:27.03:27,0,132	0/0:39,0:23:25.64:0,26,240	0/1:9,21:30:5.25:362,0,5	1/1:1,35:36:92.89:764,93,0	1/1:7,18:25:38.94:320,39,0	1/1:12,26:38:77.75:620,78,0	1/1:0,14:14:38.95:320,39,0	1/1:2,19:21:53.92:443,54,0	1/1:2,25:27:74.78:606,75,0	0/0:11,0:11:30:0,30,289	1/1:1,26:27:68.90:566,69,0	1/1:2,16:18:35.95:295,36,0	1/1:2,24:26:50.87:419,51,0	1/1:6,16:22:35.95:296,36,0	1/1:1,17:18:35.96:296,36,0	1/1:2,15:17:38.95:320,39,0	1/1:7,12:19:6.89:253,7,0	1/1:3,33:37:99:800,101,0	1/1:4,19:23:7.48:326,7,0	1/1:1,20:21:53.92:442,54,0	0/0:21,0:21:42.86:0,43,516	0/0:12,0:12:30.08:0,30,319	1/1:3,22:27:61:480,61,0	1/1:2,31:33:86.60:684,87,0	1/1:2,26:29:64.47:522,64,0	1/1:0,9:9:26.97:222,27,0
chr10	34724332	.	AGTGT	A	1163.75	PASS	AB=1.000;AC=30;AF=0.714;AN=42;BaseQRankSum=4.954;DP=552;FS=12.065;HRun=0;HaplotypeScore=105.8403;InbreedingCoeff=0.0819;MQ=60.57;MQ0=10;MQRankSum=-2.646;QD=3.31;ReadPosRankSum=-1.332;VQSLOD=1.0242;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:37:0.91:0,1,41	0/0:12,0:11:3:0,3,25	./.	./.	0/0:12,0:12:3:0,3,25	1/1:16,0:16:3:27,3,0	0/1:27,0:27:14.16:14,0,64	1/1:25,0:24:0.38:0,0,0	0/1:16,0:16:36.89:40,0,37	./.	./.	1/1:15,11:27:24.06:331,24,0	1/1:11,0:11:6:56,6,0	1/1:14,0:14:2.99:24,3,0	1/1:22,0:22:6.01:56,6,0	1/1:25,0:25:6.01:56,6,0	0/1:31,0:31:52.54:64,0,53	1/1:25,0:24:8.62:70,9,0	0/0:18,0:18:0.47:0,0,1	./.	./.	0/1:19,0:19:41.14:41,0,53	1/1:6,5:11:8.27:138,8,0	1/1:9,17:27:0.08:237,0,0	1/1:16,0:16:3:27,3,0	./.	1/1:28,0:28:5.83:56,6,0	1/1:11,0:11:6.42:44,6,0
chr10	34724363	.	GTGTGTGTGTGTGTGTC	G	3922.63	PASS	AB=0.956;AC=39;AF=0.696;AN=56;BaseQRankSum=-0.747;DP=556;FS=13.794;HRun=0;HaplotypeScore=182.5612;InbreedingCoeff=0.1582;MQ=53.18;MQ0=20;MQRankSum=-1.698;QD=8.64;ReadPosRankSum=-1.377;VQSLOD=1.5330;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:42,0:39:96.10:96,0,1295	0/1:12,0:11:10.03:74,0,10	0/0:24,0:10:8.06:0,8,97	0/1:22,0:12:3.16:3,0,252	0/1:12,0:11:70.94:71,0,105	1/1:13,0:13:3.01:77,3,0	0/1:36,0:35:52.69:53,0,127	1/1:19,0:17:12.89:120,13,0	0/1:14,0:14:62.05:62,0,102	1/1:19,0:18:24:239,24,0	1/1:3,5:8:3.01:81,3,0	0/0:24,0:23:36.10:0,36,1205	1/1:4,11:15:5.97:271,6,0	1/1:14,0:14:14.96:119,15,0	1/1:8,15:23:5.98:271,6,0	1/1:7,13:20:8.53:287,9,0	0/1:35,0:35:89.81:108,0,90	0/1:19,1:19:30.10:316,0,30	1/1:14,0:13:15.94:147,16,0	1/1:13,0:13:14.03:143,14,0	1/1:22,0:21:23.95:251,24,0	0/1:9,10:19:99:278,0,153	0/0:14,0:14:27.04:0,27,766	0/0:40,0:39:59.37:0,59,1534	1/1:11,0:10:3.01:77,3,0	1/1:17,0:15:19.50:213,19,0	1/1:11,13:24:8.52:284,9,0	1/1:9,0:9:17.99:282,18,0
chr10	34724365	.	GTGTGTGTGTGTGTC	G	3702.63	PASS	AB=1.000;AC=42;AF=0.750;AN=56;BaseQRankSum=-0.727;DP=550;FS=13.050;HRun=0;HaplotypeScore=166.7547;InbreedingCoeff=0.2702;MQ=53.09;MQ0=20;MQRankSum=-0.147;QD=8.26;ReadPosRankSum=-1.240;VQSLOD=1.9955;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:42,0:40:96.22:96,0,866	1/1:12,0:11:11.91:89,12,0	0/0:25,0:12:7.22:0,7,112	0/1:27,0:12:10.13:10,0,156	0/1:12,0:11:20.57:122,0,21	1/1:5,8:13:3.01:122,3,0	0/1:33,0:32:56.67:125,0,57	1/1:19,0:17:19.30:166,19,0	0/1:14,0:14:33.38:117,0,33	1/1:19,0:18:24:219,24,0	1/1:8,0:8:3.01:52,3,0	0/0:23,0:22:35.68:0,36,948	1/1:15,0:15:5.97:206,6,0	1/1:12,0:12:11.97:95,12,0	1/1:22,0:22:5.97:206,6,0	1/1:20,0:20:7.69:209,8,0	1/1:38,0:38:11.95:233,12,0	1/1:20,0:19:2.27:234,2,0	1/1:12,0:11:20.42:176,20,0	1/1:13,0:13:14.04:119,14,0	1/1:22,0:21:23.95:223,24,0	0/1:16,0:16:99:213,0,132	0/0:14,0:14:27.02:0,27,614	0/0:40,0:39:59.34:0,59,1256	1/1:6,5:10:3.01:122,3,0	1/1:16,0:14:20.51:162,21,0	1/1:23,0:23:6.88:208,7,0	1/1:9,0:9:17.96:179,18,0
chr10	34724367	.	GTGTGTGTGTGTC	G	3860.98	PASS	AB=1.000;AC=45;AF=0.804;AN=56;BaseQRankSum=-2.053;DP=537;FS=6.528;HRun=0;HaplotypeScore=151.5650;InbreedingCoeff=0.4509;MQ=53.48;MQ0=18;MQRankSum=-1.131;QD=8.82;ReadPosRankSum=-1.151;VQSLOD=1.7617;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:42,0:40:99:153,0,466	1/1:11,0:10:11.92:89,12,0	0/0:23,0:12:6.74:0,7,111	0/1:25,0:13:11.38:11,0,124	1/1:12,0:11:17.92:143,18,0	1/1:12,0:12:3.01:89,3,0	1/1:14,19:32:7.05:151,7,0	1/1:18,0:16:23.66:197,24,0	1/1:6,8:14:6.02:215,6,0	1/1:19,0:18:23.99:213,24,0	1/1:8,0:8:3.01:39,3,0	0/0:22,0:21:35.68:0,36,726	1/1:15,0:15:5.94:178,6,0	1/1:12,0:12:11.97:95,12,0	1/1:21,0:21:5.94:178,6,0	1/1:19,0:19:5.61:177,6,0	1/1:15,23:38:11.95:410,12,0	1/1:20,0:19:23.41:250,23,0	1/1:12,0:11:20.93:177,21,0	1/1:13,0:13:14.06:118,14,0	1/1:23,0:22:26.95:227,27,0	0/1:15,0:15:99:185,0,104	0/0:14,0:14:27.02:0,27,490	0/0:40,0:39:56.29:0,56,959	1/1:10,0:9:3.01:89,3,0	1/1:15,0:13:20.84:161,21,0	1/1:23,0:23:5.72:177,6,0	1/1:8,0:8:17.74:137,18,0
chr10	34724924	.	C	CTGTGTG	22751.12	PASS	AB=1.000;AC=35;AF=0.625;AN=56;BaseQRankSum=-9.808;DP=769;FS=0.316;HRun=0;HaplotypeScore=163.7203;InbreedingCoeff=0.9372;MQ=64.29;MQ0=2;MQRankSum=-15.943;QD=50.00;ReadPosRankSum=-3.485;VQSLOD=3.9655;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:56:99:0,111,2672	1/1:4,11:16:24.63:899,25,0	0/0:35,0:30:57.16:0,57,1056	0/0:33,0:26:27.65:0,28,830	0/0:20,0:20:44.80:0,45,752	0/0:35,0:34:87.30:0,87,1856	0/0:22,0:22:57.18:0,57,1172	1/1:24,15:42:84.27:1935,84,0	0/1:23,0:23:6.29:6,0,1084	1/1:9,15:27:60.10:1593,60,0	1/1:3,16:21:33.11:975,33,0	0/0:28,0:28:50.97:0,51,1385	1/1:11,24:40:69.24:2129,69,0	1/1:8,14:26:45.15:1320,45,0	1/1:7,16:25:36.12:1130,36,0	1/1:5,21:28:51.18:1682,51,0	0/0:38,0:42:84.24:0,84,1917	1/1:9,14:25:33.06:1002,33,0	1/1:15,9:25:39.09:1031,39,0	1/1:6,17:28:45.15:1328,45,0	1/1:10,12:22:27.09:898,27,0	1/1:5,13:20:30.10:977,30,0	0/0:19,0:19:39.12:0,39,799	0/0:23,0:24:63.22:0,63,1319	1/1:3,12:18:36.12:1122,36,0	1/1:10,17:29:69.16:1847,69,0	1/1:5,22:27:69.24:2173,69,0	1/1:2,10:12:21.07:703,21,0
chr10	34727053	.	C	CCT	1391.52	PASS	AB=0.947;AC=3;AF=0.054;AN=56;BaseQRankSum=-7.726;DP=568;FS=4.794;HRun=0;HaplotypeScore=66.6895;InbreedingCoeff=0.6756;MQ=70.85;MQ0=0;MQRankSum=-3.294;QD=25.30;ReadPosRankSum=1.580;VQSLOD=4.2680;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,37:36:81.28:1485,81,0	0/0:4,0:4:12.04:0,12,172	0/0:24,0:24:59.50:0,59,773	0/0:24,0:24:57.16:0,57,750	0/0:23,0:23:66.21:0,66,913	0/0:21,0:21:63.20:0,63,886	0/0:16,0:16:45.15:0,45,645	0/0:36,0:36:93.29:0,93,1282	0/0:14,0:14:36.10:0,36,497	0/0:25,0:25:69.22:0,69,957	0/0:12,0:12:36.11:0,36,498	0/0:28,0:28:84.24:0,84,1150	0/0:22,0:22:66.22:0,66,945	0/0:14,0:14:42.14:0,42,601	0/0:33,0:33:96.31:0,96,1358	0/0:21,0:21:63.16:0,63,832	0/1:17,1:18:6.74:7,0,574	0/0:20,0:20:60.14:0,60,816	0/0:18,0:18:42.14:0,42,599	0/0:11,0:11:27.09:0,27,387	0/0:32,0:32:90.30:0,90,1287	0/0:23,0:23:66.20:0,66,910	0/0:19,0:19:54.17:0,54,755	0/0:18,0:18:54.18:0,54,774	0/0:14,0:14:42.14:0,42,602	0/0:16,0:16:42.14:0,42,600	0/0:16,0:16:48.16:0,48,682	0/0:9,0:9:27.09:0,27,387
chr10	34728378	.	A	ATT	33250.31	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-11.820;DP=689;FS=8.293;HRun=0;HaplotypeScore=67.8560;InbreedingCoeff=0.9992;MQ=82.53;MQ0=2;MQRankSum=-6.672;QD=54.96;ReadPosRankSum=3.591;VQSLOD=5.1665;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,120,1928	1/1:1,10:11:33.07:630,33,0	0/0:26,0:26:72.20:0,72,1074	0/0:17,0:17:45.15:0,45,696	1/1:0,23:23:69.24:1402,69,0	1/1:2,19:21:57.20:1158,57,0	1/1:1,17:18:48.16:976,48,0	1/1:3,29:35:99:1911,102,0	1/1:0,29:28:78.27:1584,78,0	1/1:3,24:27:72.25:1461,72,0	1/1:0,23:23:69.24:1354,69,0	1/1:0,20:21:57.20:1157,57,0	1/1:0,30:32:81.09:1646,81,0	1/1:0,28:28:81.28:1646,81,0	1/1:1,38:40:99:2032,102,0	1/1:1,18:19:51.18:1036,51,0	1/1:1,21:23:57.20:1158,57,0	1/1:0,26:27:72.25:1463,72,0	1/1:3,18:22:63.17:1209,63,0	1/1:1,22:22:66.18:1278,66,0	1/1:1,23:25:72.20:1422,72,0	1/1:0,23:24:69.24:1378,69,0	1/1:1,26:28:75.08:1482,75,0	1/1:1,19:20:25.03:1123,25,0	1/1:0,23:25:63.22:1280,63,0	1/1:0,17:17:51.18:1026,51,0	1/1:5,28:33:87.30:1766,87,0	1/1:0,11:11:33.11:671,33,0
chr10	34733544	.	C	CATATAT	5055.51	PASS	AB=1.000;AC=27;AF=0.540;AN=50;BaseQRankSum=-4.493;DP=280;FS=4.602;HRun=0;HaplotypeScore=57.3362;InbreedingCoeff=0.7804;MQ=70.19;MQ0=1;MQRankSum=-1.608;QD=29.74;ReadPosRankSum=-3.663;VQSLOD=3.5455;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:12.02:0,12,199	0/0:1,0:3:0.94:0,1,3	0/1:9,0:7:5.22:6,0,5	0/0:11,0:8:5.61:0,6,27	0/0:17,0:17:39.09:0,39,678	0/0:17,0:17:36.12:0,36,759	0/0:4,0:4:6.02:0,6,130	1/1:8,34:44:99:1742,114,0	0/0:3,0:3:9.02:0,9,135	1/1:1,4:6:14.83:283,15,0	1/1:10,0:10:6.02:143,6,0	0/0:8,0:8:21.03:0,21,333	1/1:0,3:3:9.03:301,9,0	./.	1/1:4,0:4:3.01:74,3,0	1/1:5,0:5:11.98:214,12,0	0/0:23,0:23:57.10:0,57,1025	1/1:13,1:15:24:508,24,0	1/1:3,0:8:18.06:265,18,0	1/1:2,6:8:9.03:302,9,0	./.	./.	0/0:6,0:6:15.02:0,15,231	0/0:4,0:4:11.97:0,12,132	1/1:4,7:12:12.04:340,12,0	1/1:3,6:9:18.03:372,18,0	1/1:5,0:14:12.04:154,12,0	1/1:4,15:20:14.64:351,15,0
chr10	34737231	.	AAGCT	A	22684.77	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=12.130;DP=721;FS=5.358;HRun=0;HaplotypeScore=132.6901;InbreedingCoeff=0.9986;MQ=70.56;MQ0=0;MQRankSum=-4.607;QD=40.36;ReadPosRankSum=3.087;VQSLOD=5.2940;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,37:44:78.22:1345,78,0	1/1:1,14:15:39.13:689,39,0	0/0:10,0:10:20.94:0,21,321	0/0:14,0:14:32.98:0,33,651	0/0:36,0:36:99:0,102,2611	0/0:17,0:17:51.18:0,51,1309	0/0:36,0:36:99:0,102,2614	1/1:5,20:25:57.20:1002,57,0	0/0:17,0:17:45.15:0,45,1138	1/1:5,31:36:96.31:1653,96,0	1/1:2,16:18:42.10:709,42,0	1/1:6,16:22:42.14:742,42,0	1/1:1,22:23:63.22:1113,63,0	1/1:2,25:27:60.21:1060,60,0	1/1:4,31:35:78.04:1346,78,0	1/1:2,39:41:99:1855,105,0	0/0:29,0:29:81.28:0,81,2033	1/1:3,9:12:27.09:477,27,0	1/1:2,10:11:27.09:466,27,0	1/1:4,22:26:63.10:1015,63,0	1/1:2,27:29:57.20:1007,57,0	1/1:1,17:18:45.15:795,45,0	1/1:2,22:24:48.16:848,48,0	1/1:3,31:34:75.26:1325,75,0	1/1:5,28:33:72.25:1272,72,0	1/1:5,34:39:99:1688,99,0	1/1:3,34:37:99:1802,102,0	1/1:2,10:12:27.09:477,27,0
chr10	34737791	.	CCTCTCT	C	680.61	PASS	AB=0.691;AC=13;AF=0.250;AN=52;BaseQRankSum=1.965;DP=424;FS=2.296;HRun=0;HaplotypeScore=118.8067;InbreedingCoeff=0.6335;MQ=38.58;MQ0=38;MQRankSum=-4.166;QD=6.13;ReadPosRankSum=3.234;VQSLOD=2.3437;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:17:27.28:0,27,463	0/0:8,0:7:15.90:0,16,189	./.	./.	0/1:8,5:12:0:0,0,0	0/1:11,10:18:2.12:215,0,2	0/1:6,4:9:0.06:0,0,0	0/0:34,0:31:29.93:0,30,352	1/1:7,6:10:2.59:61,3,0	0/0:13,0:12:14.26:0,14,264	0/0:16,0:15:12.51:0,13,260	1/1:18,0:15:14.21:316,14,0	0/0:14,0:13:24.33:0,24,352	0/0:11,0:11:11.25:0,11,171	0/0:7,0:9:5.94:0,6,97	0/0:17,0:16:12.02:0,12,129	1/1:6,7:13:8.86:162,9,0	0/0:17,0:17:28.51:0,29,428	0/0:15,0:13:15.89:0,16,181	0/0:14,0:14:14.98:0,15,193	0/0:11,0:5:0.47:0,0,1	0/0:12,0:10:3:0,3,44	1/1:4,0:9:0.15:0,0,0	1/1:10,0:7:3.01:58,3,0	0/0:16,0:17:21.06:0,21,388	0/0:23,0:20:42.10:0,42,773	0/0:23,0:22:36.59:0,37,703	0/0:28,0:20:39.12:0,39,751
chr10	34737796	.	CTCTCT	C	191.43	PASS	AB=1.000;AC=10;AF=0.185;AN=54;BaseQRankSum=5.040;DP=464;FS=5.409;HRun=0;HaplotypeScore=116.1383;InbreedingCoeff=0.3883;MQ=39.66;MQ0=40;MQRankSum=-3.380;QD=1.90;ReadPosRankSum=1.854;VQSLOD=2.0323;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:21:35.14:0,35,764	0/0:8,0:7:21.04:0,21,407	./.	0/0:13,0:1:3.01:0,3,47	0/0:15,0:12:2.77:0,3,23	0/1:22,0:19:43.79:44,0,79	0/0:10,0:9:11.76:0,12,140	0/0:35,0:32:81.15:0,81,1099	0/1:13,0:10:16.25:16,0,32	0/0:14,0:13:33.03:0,33,622	0/0:18,0:17:22.01:0,22,499	1/1:12,4:15:3.67:158,4,0	0/0:16,0:15:32.14:0,32,677	0/0:12,0:12:18.51:0,19,372	0/0:16,0:12:14.95:0,15,246	0/0:18,0:17:21.07:0,21,461	0/1:14,0:13:50.12:50,0,131	0/0:18,0:18:39.12:0,39,777	0/0:16,0:14:37.96:0,38,530	0/0:18,0:18:27.09:0,27,586	0/1:13,0:7:0.01:0,0,0	0/0:12,0:10:9.43:0,9,167	1/1:6,2:9:3.35:20,3,0	1/1:10,2:9:7.19:35,7,0	0/0:19,0:18:26.90:0,27,612	0/0:24,0:21:57.03:0,57,1197	0/0:23,0:22:48.98:0,49,1093	0/0:29,0:20:45.09:0,45,1123
chr10	34740006	.	GGGGT	G	2105.75	PASS	AB=0.983;AC=28;AF=0.500;AN=56;BaseQRankSum=4.705;DP=433;FS=10.546;HRun=0;HaplotypeScore=97.9819;InbreedingCoeff=0.5613;MQ=80.05;MQ0=0;MQRankSum=-3.472;QD=7.66;ReadPosRankSum=5.329;VQSLOD=1.2866;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:40.67:0,41,624	0/1:7,0:7:29.10:29,0,36	0/0:21,0:21:51.17:0,51,1136	0/0:13,0:13:26.76:0,27,549	0/0:13,0:13:20.98:0,21,304	0/0:12,0:12:19.29:0,19,274	0/0:13,0:13:14.35:0,14,264	1/1:22,0:22:31.16:293,31,0	0/0:10,0:10:24.55:0,25,484	1/1:19,0:19:9.83:159,10,0	1/1:10,1:11:11.41:123,11,0	0/0:6,0:6:12.02:0,12,195	0/1:15,0:15:31.05:70,0,31	1/1:8,0:8:8.46:43,8,0	1/1:20,1:21:15.68:186,16,0	1/1:16,1:17:35.92:167,36,0	0/0:18,0:18:45.37:0,45,784	1/1:8,0:8:16.68:80,17,0	0/1:14,1:15:35.09:170,0,35	0/1:23,1:22:11.07:197,0,11	1/1:32,0:32:24.86:171,25,0	0/1:15,0:15:5.91:50,0,6	0/0:10,0:10:15.52:0,16,240	0/0:20,0:20:44.39:0,44,621	1/1:22,0:22:41.28:189,41,0	1/1:16,1:17:26.48:152,26,0	1/1:17,0:17:44.29:204,44,0	0/1:5,0:5:11.53:32,0,12
chr10	34740007	.	GGGT	G	7359.95	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-4.098;DP=430;FS=11.878;HRun=0;HaplotypeScore=73.4760;InbreedingCoeff=0.9693;MQ=81.05;MQ0=0;MQRankSum=-3.625;QD=27.46;ReadPosRankSum=4.914;VQSLOD=4.1641;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:43.60:0,44,507	1/1:0,7:7:12.04:184,12,0	0/0:22,0:22:54.16:0,54,934	0/0:13,0:13:24.08:0,24,449	0/0:13,0:13:23.93:0,24,266	0/0:13,0:13:20.98:0,21,222	0/0:12,0:12:15.03:0,15,194	1/1:12,10:22:60.03:711,60,0	0/0:10,0:10:24.07:0,24,367	1/1:5,13:18:45.10:644,45,0	1/1:9,2:11:26.92:320,27,0	0/0:6,0:6:12.01:0,12,149	1/1:3,11:14:24:340,24,0	1/1:1,7:8:8.74:112,9,0	1/1:4,15:19:42.09:600,42,0	1/1:1,16:17:39.05:547,39,0	0/0:19,0:19:45.49:0,45,609	1/1:0,8:8:18.03:250,18,0	1/1:6,9:15:33.01:359,33,0	1/1:8,15:22:38.58:386,39,0	1/1:7,24:31:48.59:713,49,0	1/1:2,13:15:18.06:277,18,0	0/0:10,0:10:15.48:0,15,177	0/0:21,0:21:35.99:0,36,486	1/1:5,17:22:45.07:639,45,0	1/1:8,8:16:32.98:412,33,0	1/1:4,13:17:50.94:679,51,0	1/1:1,4:5:12.04:184,12,0
chr10	34740009	.	GT	G	2683.45	PASS	AB=1.000;AC=35;AF=0.625;AN=56;BaseQRankSum=5.769;DP=406;FS=32.709;HRun=1;HaplotypeScore=72.0745;InbreedingCoeff=0.7434;MQ=81.34;MQ0=0;MQRankSum=-4.192;QD=9.58;ReadPosRankSum=5.132;VQSLOD=-0.5514;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:31.25:0,31,241	0/1:7,0:7:5.34:42,0,5	0/0:22,0:22:55.68:0,56,687	0/0:12,0:12:7.05:0,7,268	0/1:11,0:11:0.04:0,0,146	0/0:14,0:14:8.78:0,9,111	0/0:12,0:12:8.04:0,8,56	1/1:18,2:20:58.40:393,58,0	0/0:10,0:10:22.06:0,22,181	1/1:14,3:17:20.22:205,20,0	1/1:9,2:11:25.85:150,26,0	0/0:7,0:7:14.96:0,15,120	1/1:13,0:13:9.95:101,10,0	1/1:8,0:8:8.63:48,9,0	1/1:16,1:17:40:208,40,0	1/1:17,0:17:37.18:196,37,0	0/1:19,0:19:21.35:21,0,204	1/1:8,0:8:17.14:90,17,0	1/1:12,1:13:8.53:192,9,0	1/1:17,4:19:16.45:192,16,0	1/1:26,2:28:46.05:235,46,0	1/1:14,0:14:17.04:86,17,0	0/0:9,0:9:6.99:0,7,35	0/0:21,0:21:20.59:0,21,234	1/1:17,5:22:43.07:228,43,0	1/1:10,2:12:31.63:177,32,0	1/1:15,2:17:48.74:265,49,0	1/1:5,0:5:11.36:57,11,0
chr10	34741505	.	A	AAAC	22248.48	PASS	AB=0.615;AC=51;AF=0.911;AN=56;BaseQRankSum=-7.523;DP=738;FS=18.703;HRun=0;HaplotypeScore=93.6023;InbreedingCoeff=0.7618;MQ=59.78;MQ0=4;MQRankSum=1.709;QD=32.57;ReadPosRankSum=6.128;VQSLOD=3.2343;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,31:40:70.14:1724,70,0	1/1:3,7:10:24.08:452,24,0	0/0:34,0:26:35.73:0,36,419	0/0:21,0:14:23.91:0,24,296	1/1:14,18:32:48.09:832,48,0	1/1:4,20:24:39.13:782,39,0	1/1:10,10:21:10.73:358,11,0	1/1:16,10:27:33.04:500,33,0	1/1:7,17:25:48.16:962,48,0	1/1:9,16:25:48.09:874,48,0	1/1:3,14:17:33.11:656,33,0	1/1:8,19:26:48.16:960,48,0	1/1:7,11:21:24.55:480,25,0	1/1:3,14:19:42.14:822,42,0	1/1:10,23:33:56.91:1142,57,0	1/1:5,25:31:60.21:1200,60,0	1/1:12,20:34:39.21:1121,39,0	1/1:8,9:17:24.08:482,24,0	1/1:18,6:22:24.08:420,24,0	1/1:10,17:26:51.17:918,51,0	1/1:7,26:37:54.18:1065,54,0	1/1:10,12:23:33.11:628,33,0	1/1:7,18:26:42.61:843,43,0	1/1:10,25:35:74.92:1455,75,0	0/1:9,14:24:48.20:565,0,48	1/1:9,19:29:60.17:1084,60,0	1/1:15,27:42:72.20:1442,72,0	1/1:2,8:10:24.08:481,24,0
chr10	34741648	.	AGT	A	3654.29	PASS	AB=0.797;AC=32;AF=0.571;AN=56;BaseQRankSum=-2.336;DP=655;FS=2.741;HRun=0;HaplotypeScore=94.6298;InbreedingCoeff=0.5232;MQ=67.88;MQ0=11;MQRankSum=2.174;QD=9.42;ReadPosRankSum=2.265;VQSLOD=3.2768;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:40:14.51:0,15,115	1/1:4,3:7:6.02:66,6,0	0/0:27,0:17:0:0,0,0	0/0:29,0:22:3.44:0,3,21	0/0:13,0:17:6.66:0,7,75	0/1:14,1:32:15.05:15,0,131	0/0:23,0:35:27:0,27,252	1/1:25,1:24:6.01:66,6,0	0/0:10,0:17:14.99:0,15,129	1/1:13,12:22:24.06:264,24,0	1/1:13,7:21:17.88:179,18,0	0/0:25,0:30:9.16:0,9,95	1/1:11,11:23:38.53:388,39,0	0/1:22,2:24:20.99:21,0,494	1/1:12,10:22:18.05:198,18,0	1/1:7,9:18:29.74:292,30,0	0/0:11,0:27:30.46:0,30,278	1/1:9,15:24:38.78:429,39,0	1/1:18,6:21:17.16:185,17,0	1/1:11,6:17:25.47:246,25,0	1/1:31,5:37:35.82:348,36,0	0/1:13,10:23:68.97:132,0,69	0/0:7,0:14:6.94:0,7,53	0/0:20,0:28:2.92:0,3,26	0/1:6,12:18:17.97:237,0,18	1/1:6,4:10:6.01:66,6,0	1/1:9,18:28:27.03:486,27,0	1/1:6,2:7:3.01:33,3,0
chr10	34742212	.	C	CA	12899.25	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=10.090;DP=650;FS=1.181;HRun=0;HaplotypeScore=111.1960;InbreedingCoeff=0.9617;MQ=49.69;MQ0=83;MQRankSum=-1.163;QD=32.49;ReadPosRankSum=-0.038;VQSLOD=4.2385;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:6:9.03:0,9,125	1/1:2,10:11:30.10:412,30,0	0/0:24,0:1:3.01:0,3,42	0/0:40,0:16:46.93:0,47,553	0/0:20,0:17:42.14:0,42,587	0/0:19,0:18:45.15:0,45,628	0/0:28,2:22:22.15:0,22,503	1/1:2,19:11:30:326,30,0	0/0:26,1:25:60.20:0,60,832	1/1:2,26:27:75.15:993,75,0	1/1:1,10:11:21.07:293,21,0	0/0:28,0:24:51.12:0,51,673	1/1:1,35:34:91.53:1253,92,0	1/1:0,29:27:78.26:1075,78,0	1/1:2,34:34:84.46:1191,84,0	1/1:3,37:36:96.31:1318,96,0	0/0:15,0:15:33.11:0,33,460	1/1:0,16:16:39.13:535,39,0	1/1:1,11:5:15.02:177,15,0	1/1:0,24:20:57.19:790,57,0	1/1:0,38:37:99:1446,105,0	1/1:0,20:17:36.12:500,36,0	0/0:14,0:12:30.07:0,30,399	0/0:25,0:25:66.22:0,66,921	1/1:3,13:15:41.26:539,41,0	1/1:1,21:20:60.17:807,60,0	1/1:2,28:28:72.24:999,72,0	1/1:0,6:6:18.06:245,18,0
chr10	34742426	.	G	GAGA	1737.06	PASS	AB=0.843;AC=9;AF=0.161;AN=56;BaseQRankSum=8.749;DP=746;FS=17.788;HRun=0;HaplotypeScore=91.8223;InbreedingCoeff=0.0513;MQ=48.14;MQ0=58;MQRankSum=-5.793;QD=8.69;ReadPosRankSum=4.734;VQSLOD=1.6371;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,20:17:45.15:990,45,0	0/0:11,2:11:33.07:0,33,481	0/0:27,0:2:3.01:0,3,47	0/0:33,0:4:9.02:0,9,111	0/0:28,0:28:63.21:0,63,1008	0/0:23,0:17:36.11:0,36,556	0/0:21,0:18:36.12:0,36,577	0/0:29,1:28:75.16:0,75,1075	0/0:27,0:22:54.18:0,54,866	0/1:34,3:34:39.12:39,0,1303	0/0:22,3:21:48.16:0,48,771	0/0:34,0:30:72.20:0,72,1128	0/0:37,1:36:21.19:0,21,1225	0/0:36,2:35:27.24:0,27,1380	0/0:33,1:31:87.21:0,87,1341	0/0:36,1:33:87.23:0,87,1367	0/0:30,0:25:57.15:0,57,883	0/1:9,7:14:99:228,0,350	0/1:15,2:13:96.36:96,0,442	0/1:28,4:30:48:48,0,1120	0/1:24,8:29:99:388,0,764	0/0:25,3:25:72.18:0,72,1126	0/0:16,0:16:45.15:0,45,723	0/0:28,0:26:63.21:0,63,1009	0/0:16,2:16:39.11:0,39,601	0/0:16,2:15:42.14:0,42,654	0/1:34,2:35:41.92:42,0,1228	0/1:4,2:6:51.12:51,0,177
chr10	34743801	.	T	TAC	2129.14	PASS	AB=0.802;AC=29;AF=0.558;AN=52;BaseQRankSum=-4.028;DP=573;FS=0.607;HRun=0;HaplotypeScore=87.8401;InbreedingCoeff=-0.2174;MQ=70.96;MQ0=9;MQRankSum=-0.201;QD=5.03;ReadPosRankSum=-0.076;VQSLOD=2.7853;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:30.01:0,30,289	1/1:4,10:13:8.94:134,9,0	./.	./.	0/1:8,12:19:9.58:122,0,10	0/0:30,0:30:35.93:0,36,364	0/0:25,0:24:23.96:0,24,219	1/1:27,0:27:3.45:22,3,0	0/1:15,2:18:37:157,0,37	1/1:19,0:19:7.82:65,8,0	0/1:9,6:16:29.68:30,0,87	0/1:14,0:14:3.91:4,0,165	0/1:14,1:15:50.34:98,0,50	0/1:11,5:18:17.31:161,0,17	0/1:14,4:19:53.91:157,0,54	0/1:9,10:19:17.19:243,0,17	0/1:18,7:25:32.46:32,0,86	0/1:8,2:10:40.12:40,0,44	0/1:10,1:11:9.18:102,0,9	0/1:18,1:25:23.39:62,0,23	1/1:22,0:21:17.64:138,18,0	0/1:12,4:15:35.67:77,0,36	0/0:16,0:15:3.05:0,3,169	0/1:30,1:33:30.22:30,0,241	1/1:15,13:28:18.06:267,18,0	1/1:28,0:28:21.45:226,21,0	0/1:10,8:19:13.76:80,0,14	1/1:2,3:6:3.01:44,3,0
chr10	34747119	.	C	CCTAT	3780.87	PASS	AB=0.826;AC=38;AF=0.731;AN=52;BaseQRankSum=4.860;DP=734;FS=44.388;HRun=0;HaplotypeScore=149.2962;InbreedingCoeff=0.5394;MQ=51.42;MQ0=44;MQRankSum=-4.054;QD=6.89;ReadPosRankSum=-3.737;VQSLOD=0.2256;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:23:5.81:46,6,0	1/1:4,5:10:6.02:140,6,0	./.	./.	1/1:30,4:34:27.09:590,27,0	0/1:18,8:27:39.94:64,0,40	1/1:20,0:18:1.24:3,1,0	1/1:41,0:30:11.75:73,12,0	0/0:30,0:30:22.95:0,23,603	1/1:31,0:28:33.06:465,33,0	1/1:24,0:21:6.01:69,6,0	0/0:29,0:29:39.11:0,39,556	1/1:31,0:30:15.06:136,15,0	1/1:32,0:30:14.99:130,15,0	0/0:29,0:29:33.08:0,33,444	1/1:29,0:27:27.86:259,28,0	0/1:14,3:17:26.13:309,0,26	0/1:16,0:16:11.85:66,0,12	1/1:23,0:20:13.82:143,14,0	1/1:38,0:32:5.76:51,6,0	1/1:21,0:20:0.47:1,0,0	0/1:15,0:26:0:0,0,0	0/0:22,0:23:20.97:0,21,247	0/0:30,0:31:39.08:0,39,515	1/1:35,1:35:39.01:706,39,0	1/1:23,0:20:5.88:36,6,0	1/1:21,0:20:9.01:102,9,0	1/1:20,0:20:36.03:391,36,0
chr10	34747235	.	C	CGTCT	27498.40	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-3.163;DP=868;FS=3.841;HRun=0;HaplotypeScore=131.2540;InbreedingCoeff=0.8374;MQ=55.35;MQ0=1;MQRankSum=1.904;QD=32.74;ReadPosRankSum=2.400;VQSLOD=5.1137;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,12:23:33.08:613,33,0	1/1:4,11:16:21.07:530,21,0	0/0:19,0:9:12.04:0,12,184	0/0:9,0:6:1.79:0,2,67	1/1:6,31:38:30.09:758,30,0	1/1:3,30:34:48.16:1213,48,0	1/1:11,5:16:30.08:575,30,0	1/1:12,23:30:51:733,51,0	1/1:10,44:55:60.21:1513,60,0	1/1:10,33:45:99:2059,108,0	1/1:5,20:26:11.97:245,12,0	1/1:2,31:35:41.91:1042,42,0	1/1:24,18:42:72.22:1648,72,0	1/1:7,35:45:45.15:1137,45,0	1/1:4,32:37:45:1137,45,0	1/1:3,23:27:42.14:1061,42,0	1/1:8,14:22:51.11:1253,51,0	1/1:7,10:17:36.10:793,36,0	1/1:11,1:10:29.85:517,30,0	1/1:6,45:51:60.18:1516,60,0	1/1:2,16:20:21.07:531,21,0	1/1:24,18:42:69.21:1502,69,0	1/1:1,25:27:38.98:985,39,0	1/1:2,21:24:17.91:455,18,0	1/1:2,30:31:48.16:1212,48,0	1/1:7,42:48:99:2462,117,0	1/1:9,37:47:51.17:1252,51,0	1/1:2,17:19:30.10:758,30,0
chr10	34747338	.	GTATC	G	5722.60	PASS	AB=0.806;AC=32;AF=0.615;AN=52;BaseQRankSum=-1.367;DP=798;FS=4.743;HRun=0;HaplotypeScore=133.1624;InbreedingCoeff=0.6788;MQ=42.88;MQ0=46;MQRankSum=-5.118;QD=11.24;ReadPosRankSum=-4.736;VQSLOD=2.9430;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:30,4:26:2.64:25,3,0	1/1:7,4:9:9.03:145,9,0	./.	./.	0/0:54,0:51:99:0,102,2202	0/0:19,0:18:27.09:0,27,648	0/0:26,1:20:24.03:0,24,373	1/1:35,1:16:29.69:221,30,0	0/0:49,0:44:78.23:0,78,1618	1/1:27,14:36:72.23:1137,72,0	1/1:24,6:27:17.95:234,18,0	0/0:32,0:32:48.14:0,48,1009	0/1:24,9:30:31.45:194,0,31	0/1:27,7:33:17.94:300,0,18	1/1:27,13:37:27.04:366,27,0	1/1:15,8:21:18:215,18,0	0/0:37,0:34:45.87:0,46,975	0/1:23,3:25:35.29:35,0,338	1/1:11,4:14:23.73:343,24,0	1/1:20,22:42:24.08:381,24,0	1/1:13,0:9:9.03:146,9,0	1/1:18,5:22:14.99:214,15,0	0/0:31,0:30:57.10:0,57,1194	0/0:35,0:30:23.10:0,23,452	1/1:13,15:25:18.04:245,18,0	1/1:30,19:38:86.45:1232,86,0	1/1:19,7:25:20.94:291,21,0	0/1:3,2:5:0:0,0,0
chr10	34747454	.	CTATCTATCTATGTATG	C	2048.14	PASS	AB=1.000;AC=12;AF=0.231;AN=52;BaseQRankSum=-2.544;DP=924;FS=10.833;HRun=0;HaplotypeScore=297.5278;InbreedingCoeff=0.7093;MQ=46.37;MQ0=43;MQRankSum=4.340;QD=10.72;ReadPosRankSum=-3.845;VQSLOD=0.6463;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:28:11.35:0,11,221	0/0:19,0:18:51.17:0,51,1774	0/0:14,0:2:6.02:0,6,84	./.	./.	1/1:23,0:22:33.05:441,33,0	1/1:16,0:11:2.44:23,2,0	0/0:69,0:40:99:0,111,1852	1/1:32,0:28:27.07:412,27,0	0/0:72,0:70:99:0,171,6119	0/0:30,0:27:51.14:0,51,1793	1/1:45,0:35:37.33:538,37,0	0/0:50,0:50:93.32:0,93,3261	0/0:46,0:43:67.58:0,68,1899	0/0:40,0:39:57.20:0,57,1721	0/0:36,0:34:56.95:0,57,1818	1/1:21,0:16:15.25:220,15,0	0/0:15,0:13:27.04:0,27,792	0/0:19,0:12:36.08:0,36,1186	0/0:53,0:49:99:0,126,3800	0/0:29,0:29:72.23:0,72,2296	0/0:29,0:26:51.17:0,51,1612	0/1:34,0:32:80.86:488,0,81	0/1:20,0:17:31.28:95,0,31	0/0:28,0:25:69.22:0,69,2548	0/0:48,0:42:99:0,117,3495	0/0:45,0:44:99:0,99,2817	0/0:21,0:19:51.04:0,51,1995
chr10	34747586	.	CTATCTATGTATCTATG	C	1864.76	PASS	AB=1.000;AC=26;AF=0.520;AN=50;BaseQRankSum=-3.338;DP=732;FS=2.140;HRun=0;HaplotypeScore=239.9366;InbreedingCoeff=0.5683;MQ=50.86;MQ0=58;MQRankSum=0.603;QD=4.91;ReadPosRankSum=0.172;VQSLOD=2.7788;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:13:6.02:97,6,0	./.	0/0:36,0:11:0.89:0,1,2	./.	0/0:30,0:26:5.68:0,6,66	0/0:17,0:17:0:0,0,0	0/0:13,0:10:3.73:0,4,16	1/1:48,0:40:11.97:97,12,0	0/0:25,0:20:4.03:0,4,28	1/1:38,0:27:14.96:184,15,0	1/1:20,0:17:9.02:124,9,0	0/0:33,0:26:3.81:0,4,25	0/0:41,0:40:12.47:0,12,80	1/1:29,0:20:8.65:142,9,0	1/1:31,0:23:15.02:200,15,0	1/1:25,0:21:15.04:226,15,0	0/1:18,0:13:0.01:0,0,0	0/1:18,0:13:41.30:53,0,41	1/1:12,6:13:15.05:243,15,0	0/0:44,0:38:0.47:0,0,1	./.	0/0:23,0:20:5.99:0,6,50	0/0:30,0:28:7.50:0,7,51	0/0:11,0:10:3.46:0,3,24	1/1:32,0:25:30.06:427,30,0	1/1:27,0:17:6.01:73,6,0	1/1:29,0:18:8.99:93,9,0	1/1:18,0:16:7.76:65,8,0
chr10	34747622	.	CTATGTATCTATG	C	1644.84	PASS	AB=1.000;AC=15;AF=0.288;AN=52;BaseQRankSum=4.244;DP=668;FS=2.008;HRun=0;HaplotypeScore=160.0522;InbreedingCoeff=-0.2533;MQ=40.38;MQ0=99;MQRankSum=2.444;QD=4.27;ReadPosRankSum=4.584;VQSLOD=2.5660;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:32,0:16:42.49:88,0,42	0/0:10,0:5:6.02:0,6,74	./.	./.	0/0:36,0:31:23.75:0,24,374	0/0:17,0:15:10.80:0,11,158	0/0:10,0:6:2.27:0,2,7	0/1:46,0:17:23.95:77,0,24	0/0:18,0:15:9.68:0,10,132	0/1:43,0:27:99:121,0,807	0/1:16,0:8:39.40:112,0,39	0/1:35,0:25:3.29:3,0,238	0/0:35,0:34:21.33:0,21,234	1/1:28,0:17:12.88:166,13,0	0/1:29,0:21:99:167,0,251	0/1:25,0:19:99:202,0,105	0/0:24,0:16:7.11:0,7,105	0/1:19,0:8:37.33:93,0,37	0/1:19,0:12:99:194,0,225	0/0:14,24:30:15.52:0,16,258	0/0:13,0:10:18.05:0,18,284	0/0:24,0:20:5.99:0,6,50	0/0:28,0:26:27.59:0,28,340	0/0:18,0:13:15.50:0,16,217	0/1:29,0:19:66.83:391,0,67	0/1:25,0:13:62.71:63,0,281	0/1:24,0:12:74.89:75,0,136	0/1:14,0:10:44.41:44,0,167
chr10	34747626	.	GTATCTATGTATC	G	1314.78	PASS	AB=0.978;AC=21;AF=0.404;AN=52;BaseQRankSum=4.680;DP=656;FS=1.777;HRun=0;HaplotypeScore=164.5690;InbreedingCoeff=-0.3932;MQ=40.42;MQ0=98;MQRankSum=1.505;QD=2.57;ReadPosRankSum=6.023;VQSLOD=2.3427;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:16:18.74:41,0,19	0/0:10,0:5:6.02:0,6,118	./.	./.	0/1:38,0:32:99:277,0,178	0/1:16,0:14:94.86:99,0,95	0/1:10,0:5:2.69:19,0,3	1/1:49,0:17:0.05:1,0,0	0/1:15,0:12:30.92:31,0,64	0/0:44,0:28:11.65:0,12,1102	0/1:17,0:9:37.25:37,0,112	0/1:36,0:26:61.64:62,0,163	0/1:38,0:36:99:169,0,139	0/1:28,0:16:1.55:100,0,2	0/1:27,0:19:44.89:45,0,379	0/1:23,0:17:79.61:80,0,140	0/1:25,0:16:5.92:6,0,87	0/1:21,0:10:0.38:186,0,0	0/1:18,0:14:55.99:56,0,462	0/0:38,0:30:18.53:0,19,371	0/0:14,0:11:20.97:0,21,409	0/1:6,16:18:0:0,0,0	0/1:25,0:23:86.68:87,0,192	0/1:19,0:14:9.21:9,0,118	0/1:29,0:19:99:145,0,149	0/0:23,0:11:5.54:0,6,377	0/1:23,0:11:4.94:5,0,291	0/0:13,0:10:6.78:0,7,242
chr10	34747634	.	GTATC	G	146.51	PASS	AB=1.000;AC=6;AF=0.115;AN=52;BaseQRankSum=2.798;DP=668;FS=13.614;HRun=0;HaplotypeScore=119.2516;InbreedingCoeff=0.4587;MQ=40.42;MQ0=102;MQRankSum=-1.302;QD=1.77;ReadPosRankSum=0.984;VQSLOD=1.2315;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:17:3.34:0,3,31	0/0:10,0:5:6.02:0,6,118	./.	./.	0/0:38,0:32:33.05:0,33,331	0/0:17,0:15:13.79:0,14,150	0/0:12,0:6:2.97:0,3,20	0/0:56,0:18:0:0,0,0	0/1:15,0:12:11.91:12,0,52	0/0:45,0:30:78.25:0,78,1480	0/0:17,0:9:8.74:0,9,169	0/0:35,0:26:15.50:0,16,176	0/0:34,0:32:18.02:0,18,170	1/1:12,17:17:5.99:67,6,0	0/0:26,0:18:24.08:0,24,471	0/0:25,0:19:14.63:0,15,297	0/0:27,0:18:23.52:0,24,172	1/1:14,5:8:0.68:169,1,0	0/0:21,0:16:35.58:0,36,583	0/0:39,0:31:21.07:0,21,415	0/0:16,0:13:26.89:0,27,532	0/1:20,0:16:0:0,0,0	0/0:23,0:21:18.06:0,18,225	0/0:18,0:13:11.88:0,12,133	0/0:29,0:19:18.03:0,18,290	0/0:24,0:13:33.10:0,33,608	0/0:27,0:14:24.08:0,24,445	0/0:11,0:9:24.01:0,24,438
chr10	34748720	.	A	ACG	1883.86	PASS	AB=0.790;AC=10;AF=0.179;AN=56;BaseQRankSum=-3.850;DP=660;FS=15.295;HRun=0;HaplotypeScore=88.4605;InbreedingCoeff=0.3221;MQ=56.49;MQ0=14;MQRankSum=4.441;QD=9.66;ReadPosRankSum=5.798;VQSLOD=1.6287;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:44:45.45:0,45,457	0/0:11,0:11:26.61:0,27,301	0/0:20,0:7:17.99:0,18,170	0/0:18,0:11:25.94:0,26,263	1/1:2,20:23:18.06:338,18,0	1/1:1,20:21:27.09:517,27,0	0/1:7,11:18:65.65:199,0,66	0/0:29,0:27:77.86:0,78,698	0/1:5,15:20:4.52:276,0,5	0/0:19,0:19:53.97:0,54,515	0/0:11,0:11:14.48:0,14,164	0/1:26,0:25:99:183,0,125	0/0:21,0:21:31.48:0,31,394	0/0:31,0:30:71.94:0,72,674	0/0:30,0:30:75:0,75,782	0/0:35,0:35:89.86:0,90,896	0/1:6,27:31:9.14:367,0,9	0/0:19,0:19:49.42:0,49,441	0/0:25,0:23:54.58:0,55,528	0/0:18,0:17:40.23:0,40,385	0/0:47,0:44:92.64:0,93,829	0/0:19,0:19:19.47:0,19,312	0/1:14,0:14:71.47:86,0,71	0/1:40,0:39:74.62:75,0,297	0/0:18,0:18:48.01:0,48,486	0/0:20,0:18:50.82:0,51,442	0/0:23,0:22:39.41:0,39,522	0/0:5,0:4:12.01:0,12,139
chr10	34752364	.	A	AGT	2142.84	PASS	AB=0.755;AC=35;AF=0.700;AN=50;BaseQRankSum=-5.679;DP=650;FS=0.717;HRun=0;HaplotypeScore=99.6755;InbreedingCoeff=0.3833;MQ=67.31;MQ0=8;MQRankSum=0.726;QD=4.59;ReadPosRankSum=-2.106;VQSLOD=2.5575;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:12.02:0,12,130	./.	./.	./.	0/0:12,0:19:8.52:0,9,42	0/0:15,0:21:11.36:0,11,56	0/0:12,0:26:19.89:0,20,98	1/1:34,0:34:5.10:25,5,0	0/0:18,0:31:22.73:0,23,112	1/1:18,7:25:15.46:173,15,0	0/1:9,6:17:23.38:80,0,23	0/1:12,7:20:33.85:183,0,34	1/1:9,1:21:6:52,6,0	1/1:16,1:21:9.01:97,9,0	1/1:15,8:25:12.03:159,12,0	1/1:10,5:17:12.02:141,12,0	0/1:25,0:40:10.38:10,0,108	0/1:12,6:21:0.58:146,0,1	1/1:15,0:20:12.01:126,12,0	1/1:13,0:20:9:78,9,0	1/1:23,0:29:3:26,3,0	1/1:9,0:18:6:52,6,0	1/1:9,9:18:9.03:133,9,0	1/1:17,8:27:18.05:247,18,0	0/1:15,0:27:23.41:43,0,23	1/1:15,8:26:3.34:330,3,0	1/1:10,2:17:12.01:123,12,0	1/1:13,1:14:6.02:86,6,0
chr10	34752935	.	C	CA	19733.31	PASS	AB=0.566;AC=45;AF=0.804;AN=56;BaseQRankSum=-2.498;DP=763;FS=13.233;HRun=0;HaplotypeScore=136.4155;InbreedingCoeff=0.4594;MQ=47.78;MQ0=99;MQRankSum=1.711;QD=29.23;ReadPosRankSum=4.175;VQSLOD=3.6562;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:36,35:63:99:1113,0,813	0/0:13,0:9:27.09:0,27,377	0/0:27,0:4:12.03:0,12,151	0/0:47,0:10:30.08:0,30,371	0/1:4,20:24:71.22:572,0,71	1/1:4,24:24:27.31:821,27,0	0/1:5,17:14:9.17:365,0,9	1/1:9,25:22:60.13:792,60,0	1/1:4,12:12:33.08:432,33,0	1/1:2,30:30:84.75:1176,85,0	1/1:2,10:12:30.08:392,30,0	1/1:4,28:29:39.43:1032,39,0	1/1:0,27:24:66.22:904,66,0	1/1:5,22:24:59.10:815,59,0	1/1:0,43:40:99:1377,102,0	1/1:0,26:26:69.23:936,69,0	1/1:7,19:23:57.16:766,57,0	1/1:1,9:10:24.08:327,24,0	1/1:0,21:16:48.14:654,48,0	1/1:2,27:29:64.05:912,64,0	1/1:1,41:42:99:1400,102,0	1/1:1,17:18:45.15:619,45,0	0/1:1,16:17:2.74:457,0,3	0/1:4,26:29:11.42:834,0,11	1/1:1,14:15:32.95:458,33,0	1/1:3,29:31:84.22:1132,84,0	1/1:3,34:35:96.29:1283,96,0	1/1:0,4:4:12.04:169,12,0
chr10	34753149	.	G	GAGA	14302.90	PASS	AB=0.639;AC=34;AF=0.607;AN=56;BaseQRankSum=12.586;DP=703;FS=4.658;HRun=0;HaplotypeScore=115.2552;InbreedingCoeff=0.7776;MQ=39.29;MQ0=54;MQRankSum=-14.057;QD=33.97;ReadPosRankSum=-4.395;VQSLOD=3.8068;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:11,43:47:87.26:1858,87,0	1/1:2,9:10:24.08:529,24,0	0/0:32,0:4:6.02:0,6,88	0/0:27,0:3:2.99:0,3,23	0/0:32,0:32:81.21:0,81,1271	0/0:23,0:20:48.16:0,48,771	0/0:26,0:18:33.04:0,33,468	1/1:13,20:23:6.03:1001,6,0	0/0:17,0:16:36.11:0,36,556	1/1:3,19:17:42.13:871,42,0	1/1:2,27:22:48.16:1054,48,0	0/0:41,0:38:77.18:0,77,1173	1/1:2,25:21:60.17:1273,60,0	1/1:6,22:19:42.14:911,42,0	0/1:8,23:23:5.91:815,0,6	1/1:3,12:11:21.07:462,21,0	0/0:39,0:37:54.12:0,54,837	1/1:1,5:7:12.04:246,12,0	1/1:9,11:17:42.09:764,42,0	1/1:2,20:15:39.13:829,39,0	0/1:11,7:16:36.03:186,0,36	1/1:1,6:7:15.05:330,15,0	0/0:25,0:25:54.17:0,54,843	0/0:20,0:20:39.08:0,39,597	1/1:1,19:16:30.06:613,30,0	1/1:8,25:24:60.17:1178,60,0	1/1:8,26:30:60.21:1317,60,0	1/1:0,2:1:3.01:66,3,0
chr10	34754476	.	TTCTCTC	T	840.74	PASS	AB=0.940;AC=21;AF=0.438;AN=48;BaseQRankSum=-0.358;DP=508;FS=14.731;HRun=0;HaplotypeScore=114.0736;InbreedingCoeff=0.1920;MQ=68.70;MQ0=10;MQRankSum=2.335;QD=3.70;ReadPosRankSum=4.389;VQSLOD=1.2128;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:5.98:0,6,53	1/1:9,0:9:3.01:33,3,0	./.	./.	0/0:20,0:20:2.96:0,3,19	0/0:25,0:25:15.94:0,16,311	0/0:22,0:22:15.05:0,15,325	0/0:27,0:27:0.89:0,1,2	0/0:9,0:9:3:0,3,26	0/1:18,0:18:36.65:99,0,37	0/0:12,0:12:0:0,0,0	0/0:8,0:14:6:0,6,54	0/1:33,0:32:32.80:33,0,56	1/1:20,0:20:0.47:1,0,0	./.	1/1:15,0:15:2.55:94,3,0	0/0:14,0:13:6.02:0,6,154	0/1:7,0:9:44.14:44,0,60	1/1:15,0:15:9.03:150,9,0	1/1:20,0:19:3.01:55,3,0	1/1:28,0:28:2.04:6,2,0	0/1:19,0:18:2.24:59,0,2	0/0:15,5:20:2.97:0,3,20	0/0:19,0:17:1.97:0,2,21	1/1:13,0:13:6.02:119,6,0	1/1:13,0:13:3.87:30,4,0	0/1:13,1:15:34.71:254,0,35	./.
chr10	34754520	.	C	CTGTGTGTG	1610.02	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=7.951;DP=534;FS=6.341;HRun=0;HaplotypeScore=125.1662;InbreedingCoeff=0.0083;MQ=51.61;MQ0=29;MQRankSum=-5.946;QD=7.25;ReadPosRankSum=-0.138;VQSLOD=2.0765;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:13,0:12:29.74:30,0,128	0/0:7,0:7:7.36:0,7,58	0/0:23,0:5:2.24:0,2,50	0/1:37,0:14:14.72:15,0,254	0/0:25,0:25:54.13:0,54,1369	0/0:23,0:23:56.82:0,57,1488	0/0:12,0:12:27.09:0,27,783	0/0:22,0:21:42.86:0,43,889	0/0:16,0:16:29.26:0,29,747	0/1:15,0:15:99:386,0,141	0/0:16,0:15:3:0,3,25	0/0:22,0:21:39.13:0,39,1078	0/1:33,0:28:63.02:63,0,160	0/0:24,0:23:3.01:0,3,42	0/0:21,0:19:0:0,0,0	0/1:18,0:18:28.90:156,0,29	0/0:18,0:17:30.03:0,30,727	0/1:6,0:6:27.23:106,0,27	0/1:10,0:9:41.01:175,0,41	0/0:20,0:18:5.98:0,6,76	1/1:18,0:16:11.31:81,11,0	1/1:10,11:23:0.34:4,0,0	0/0:22,0:22:27.06:0,27,579	0/0:29,0:26:43.92:0,44,1195	0/0:4,8:11:6.02:0,6,98	0/1:23,0:21:99:330,0,181	0/1:19,0:18:99:300,0,206	1/1:5,0:4:6.02:116,6,0
chr10	34754522	.	C	CTGTGTGTGTG	2485.41	PASS	AB=0.945;AC=19;AF=0.352;AN=54;BaseQRankSum=6.046;DP=539;FS=0.606;HRun=0;HaplotypeScore=135.0561;InbreedingCoeff=0.3368;MQ=52.70;MQ0=29;MQRankSum=-3.773;QD=10.76;ReadPosRankSum=-1.104;VQSLOD=2.4924;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:12,0:11:20.83:21,0,88	0/0:6,0:6:6.89:0,7,53	0/0:26,0:6:12.28:0,12,122	0/1:38,0:15:9.64:10,0,388	0/0:24,0:24:57.16:0,57,1584	0/0:23,0:23:54.12:0,54,1557	0/0:14,0:14:30.06:0,30,843	0/0:23,0:22:35.09:0,35,668	0/0:17,0:17:30.99:0,31,845	1/1:15,0:15:18.72:595,19,0	0/0:2,10:14:0:0,0,0	0/0:24,0:23:39.13:0,39,1200	0/1:14,0:27:39.16:82,0,39	0/0:9,13:24:0.47:0,0,1	./.	1/1:18,0:18:10.68:245,11,0	0/0:18,0:17:27.18:0,27,800	0/1:6,0:6:46.65:177,0,47	1/1:11,0:10:18.78:414,19,0	0/0:4,9:21:1.56:0,2,12	1/1:17,0:15:10.20:50,10,0	1/1:23,0:21:4.25:47,4,0	0/0:22,0:22:26.33:0,26,618	0/0:28,0:25:51.12:0,51,1339	0/1:11,0:10:5.35:5,0,6	0/1:21,0:19:99:419,0,107	0/1:21,0:19:58.91:439,0,59	1/1:5,0:4:6.02:152,6,0
chr10	34754528	.	C	CTGTGTGTGTGTGTGTG	5722.40	PASS	AB=1.000;AC=30;AF=0.577;AN=52;BaseQRankSum=-3.085;DP=593;FS=1.235;HRun=0;HaplotypeScore=194.6521;InbreedingCoeff=0.6051;MQ=52.37;MQ0=27;MQRankSum=-7.047;QD=15.14;ReadPosRankSum=-1.888;VQSLOD=3.5417;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:12,0:12:4.80:27,5,0	0/0:7,0:7:3.08:0,3,33	0/0:31,0:10:20.94:0,21,485	0/1:45,0:19:20.33:20,0,620	0/0:26,0:26:51.27:0,51,1658	0/0:25,0:25:44.48:0,44,1260	0/0:16,0:16:23.93:0,24,501	0/1:32,0:31:27.89:763,0,28	0/0:19,0:19:29.49:0,29,895	1/1:20,0:19:37.11:1454,37,0	1/1:14,0:13:3:45,3,0	0/0:26,0:25:44.86:0,45,1153	1/1:35,0:30:10.55:186,11,0	1/1:27,0:26:5.67:35,6,0	0/1:22,0:20:0:0,0,0	1/1:20,0:20:14.63:472,15,0	0/1:18,0:18:0.75:1,0,664	./.	1/1:10,0:9:18.06:706,18,0	1/1:24,0:22:6.02:118,6,0	1/1:14,4:18:2.99:23,3,0	1/1:30,0:28:5.87:40,6,0	0/0:21,0:21:21.42:0,21,672	0/0:28,0:26:45.15:0,45,1368	./.	1/1:20,0:18:26.19:928,26,0	1/1:24,0:22:18.04:646,18,0	1/1:5,0:4:6.02:259,6,0
chr10	34755416	.	CT	C	4749.85	PASS	AB=0.917;AC=19;AF=0.339;AN=56;BaseQRankSum=12.684;DP=743;FS=2.229;HRun=10;HaplotypeScore=78.2291;InbreedingCoeff=0.9482;MQ=71.69;MQ0=3;MQRankSum=-0.373;QD=18.27;ReadPosRankSum=4.184;VQSLOD=5.5813;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:59,0:60:99:0,144,1593	1/1:0,13:13:32.99:286,33,0	0/0:29,1:20:32.66:0,33,282	0/1:19,0:12:2.41:2,0,107	1/1:3,29:32:80.95:703,81,0	1/1:4,23:27:32.79:514,33,0	1/1:4,22:26:56.97:492,57,0	0/0:41,1:42:83.46:0,83,1118	1/1:0,15:15:41.99:365,42,0	0/0:29,0:29:81.21:0,81,889	0/0:23,0:23:53.59:0,54,659	1/1:3,27:30:59.98:521,60,0	0/0:15,0:15:42.10:0,42,456	0/0:22,1:23:24.67:0,25,602	0/0:23,0:23:27.49:0,27,489	0/0:26,0:26:72.19:0,72,789	1/1:1,29:30:74.98:651,75,0	0/0:17,0:17:45.12:0,45,494	0/0:25,0:26:60:0,60,645	0/0:33,0:35:99:0,99,1045	0/0:22,0:22:32.74:0,33,525	0/0:18,0:18:51.13:0,51,556	1/1:7,31:38:50.79:669,51,0	1/1:3,24:27:62.98:546,63,0	0/0:21,1:22:31.08:0,31,561	0/0:22,1:23:45.12:0,45,492	0/0:33,0:33:85.76:0,86,959	0/0:16,0:15:45.09:0,45,484
chr10	34756691	.	GAGCAC	G	4937.49	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=12.395;DP=687;FS=9.556;HRun=0;HaplotypeScore=124.0688;InbreedingCoeff=0.9978;MQ=75.02;MQ0=0;MQRankSum=-4.127;QD=47.94;ReadPosRankSum=4.074;VQSLOD=4.9559;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:93.32:0,93,2950	0/0:12,0:12:33.11:0,33,1019	0/0:28,0:28:66.23:0,66,1951	0/0:15,0:15:42.14:0,42,1245	1/1:1,16:15:33.11:689,33,0	1/1:1,28:27:60.14:1255,60,0	1/1:2,14:15:33.11:715,33,0	0/0:35,0:35:99:0,99,2957	1/1:1,27:28:75.25:1627,75,0	0/0:40,0:40:99:0,102,3153	0/0:30,0:30:87.30:0,87,2609	0/0:30,0:30:90.31:0,90,2852	0/0:23,0:23:69.24:0,69,2160	0/0:29,0:29:81.28:0,81,2569	0/0:30,0:30:84.26:0,84,2547	0/0:15,0:15:45.14:0,45,1356	1/1:2,11:13:30.10:651,30,0	0/0:17,0:17:42.14:0,42,1205	0/0:16,0:16:48.15:0,48,1379	0/0:41,0:41:99:0,117,3584	0/0:33,0:33:93.31:0,93,2834	0/0:26,0:26:72.23:0,72,2191	0/0:25,0:25:69.24:0,69,2117	0/0:23,0:23:69.22:0,69,2065	0/0:22,0:22:63.22:0,63,1996	0/0:26,0:26:78.27:0,78,2382	0/0:30,0:30:90.31:0,90,2793	0/0:6,0:6:18.06:0,18,544
chr10	34758213	.	T	TTTA	138.21	PASS	AB=1.000;AC=4;AF=0.250;AN=16;BaseQRankSum=0.857;DP=61;FS=0.000;HRun=0;HaplotypeScore=30.7266;MQ=99.88;MQ0=13;MQRankSum=-0.694;QD=3.64;ReadPosRankSum=-0.286;VQSLOD=0.6964;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	1/1:3,5:8:11.94:182,12,0	0/1:17,0:9:1.30:1,0,188	0/1:13,0:8:29.05:29,0,61	./.	0/0:2,0:1:0.47:0,0,1	./.	0/0:4,0:3:3.01:0,3,51	./.	./.	./.	./.	./.	./.	0/0:2,0:1:0.47:0,0,1	./.	./.	./.	./.	./.	./.	./.	0/0:2,0:1:0.47:0,0,1	./.	./.	0/0:2,0:1:0:0,0,0	./.	./.
chr10	34758303	.	TCCCCAGCCCC	T	116.40	PASS	AC=2;AF=0.25;AN=8;BaseQRankSum=3.062;DP=36;FS=11.146;HRun=0;HaplotypeScore=66.8697;MQ=83.52;MQ0=6;MQRankSum=-2.479;QD=19.40;ReadPosRankSum=-2.887;VQSLOD=0.2667;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	0/0:10,0:10:27.09:0,27,1470	0/0:5,0:5:15.05:0,15,797	0/0:7,0:7:21.07:0,21,1045	./.	./.	./.	1/1:0,6:6:17.98:193,18,0	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.
chr10	34759949	.	TG	T	1564.87	PASS	AB=0.994;AC=11;AF=0.196;AN=56;BaseQRankSum=3.789;DP=660;FS=2.229;HRun=1;HaplotypeScore=129.9470;InbreedingCoeff=0.4503;MQ=69.99;MQ0=4;MQRankSum=-1.439;QD=9.78;ReadPosRankSum=-3.191;VQSLOD=0.3348;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:99:0,99,1430	0/0:16,0:16:47.62:0,48,519	0/0:26,0:22:44.13:0,44,819	0/0:25,0:21:48.67:0,49,806	0/1:29,1:30:99:112,0,135	0/1:26,0:26:84.09:162,0,84	0/1:20,0:20:55.90:56,0,85	0/0:35,0:35:99:0,101,1202	0/1:16,0:15:57.99:84,0,58	0/0:26,0:26:74.20:0,74,867	0/0:21,0:21:60.12:0,60,906	1/1:16,0:16:39.11:488,39,0	0/0:27,0:27:74.38:0,74,950	0/0:19,0:19:56.89:0,57,777	0/0:25,0:25:74.99:0,75,1041	0/0:28,0:28:82.84:0,83,970	0/1:27,0:27:5.65:6,0,127	0/0:28,0:28:84.06:0,84,1190	0/0:26,0:25:71.37:0,71,794	0/0:27,0:27:74.23:0,74,955	0/0:13,0:13:38.93:0,39,530	0/0:15,0:15:44.85:0,45,609	1/1:11,1:12:33.01:393,33,0	1/1:11,2:13:36.06:429,36,0	0/0:27,0:27:80.80:0,81,1086	0/0:21,0:21:62.54:0,63,763	0/0:45,0:45:99:0,135,1857	0/0:16,0:16:43.21:0,43,437
chr10	34760626	.	CCTAT	C	1968.64	PASS	AB=0.976;AC=24;AF=0.480;AN=50;BaseQRankSum=-1.075;DP=820;FS=4.715;HRun=0;HaplotypeScore=133.1193;InbreedingCoeff=0.5059;MQ=51.29;MQ0=59;MQRankSum=1.352;QD=4.48;ReadPosRankSum=-0.609;VQSLOD=2.0955;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:45,1:46:15.03:197,15,0	0/0:20,0:19:6.02:0,6,118	./.	./.	0/1:22,0:23:13.12:22,0,13	0/0:25,0:25:18.05:0,18,301	0/0:30,0:25:2.92:0,3,17	./.	0/0:26,0:24:21.07:0,21,437	0/1:49,1:48:97.95:253,0,98	1/1:20,1:20:9:92,9,0	0/0:29,0:29:8.80:0,9,128	0/0:31,0:30:33.11:0,33,657	1/1:32,1:33:11.37:139,11,0	1/1:48,1:49:30.04:380,30,0	0/0:32,0:31:24.26:0,24,276	1/1:21,0:20:15.02:195,15,0	0/0:25,0:24:3.15:0,3,12	1/1:17,0:12:3.01:45,3,0	1/1:31,1:31:18.05:244,18,0	0/1:40,0:40:6.53:84,0,7	1/1:29,3:32:18.05:244,18,0	0/0:28,0:28:8.21:0,8,120	0/0:26,0:25:13.82:0,14,152	0/0:27,0:25:3.01:0,3,44	0/1:32,0:31:31.92:32,0,100	1/1:25,1:26:9.03:134,9,0	1/1:15,1:16:6.02:89,6,0
chr10	34760762	.	GTATCTATC	G	5672.35	PASS	AB=0.990;AC=28;AF=0.519;AN=54;BaseQRankSum=-7.376;DP=773;FS=8.273;HRun=0;HaplotypeScore=217.4633;InbreedingCoeff=-0.4954;MQ=49.82;MQ0=11;MQRankSum=2.419;QD=7.86;ReadPosRankSum=-8.454;VQSLOD=-0.2148;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:28:2.69:119,0,3	0/0:19,0:19:48.05:0,48,874	0/0:12,0:3:9:0,9,82	./.	0/1:36,4:38:99:347,0,808	0/1:23,1:23:99:243,0,460	0/0:17,0:16:1.96:0,2,173	1/1:41,0:22:21.33:124,21,0	0/1:29,2:29:73.40:73,0,882	0/1:34,0:33:38.86:335,0,39	0/1:27,0:27:23.61:261,0,24	1/1:4,25:28:0.22:1,0,0	0/1:34,0:34:99:144,0,227	0/1:33,0:33:42.93:234,0,43	0/1:40,0:38:8.40:228,0,8	0/1:29,0:28:14.39:223,0,14	0/1:21,0:21:83.06:83,0,363	0/1:20,0:19:55.56:132,0,56	0/1:20,0:20:23.31:191,0,23	0/1:52,0:52:99:393,0,145	0/1:15,0:15:31.45:128,0,31	0/1:26,0:26:99:205,0,118	1/1:21,4:25:56.09:682,56,0	1/1:15,0:14:27.45:362,27,0	0/1:31,0:31:6.76:264,0,7	0/1:42,0:41:99:419,0,243	0/1:47,0:46:99:393,0,153	0/1:18,0:18:20.64:86,0,21
chr10	34763330	.	CATTTATTTATTTATTTATTTATTTATTT	C	1117.56	PASS	AB=0.950;AC=10;AF=0.227;AN=44;BaseQRankSum=3.232;DP=281;FS=14.454;HRun=0;HaplotypeScore=179.0977;InbreedingCoeff=0.3523;MQ=55.96;MQ0=3;MQRankSum=-2.044;QD=14.15;ReadPosRankSum=0.350;VQSLOD=1.7098;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:15:3.63:0,4,206	0/0:2,0:2:3.01:0,3,131	./.	0/0:2,0:2:0.89:0,1,2	1/1:12,8:20:3.01:90,3,0	1/1:12,10:22:9.03:432,9,0	./.	0/0:37,0:35:39.11:0,39,1142	1/1:9,0:9:6.02:267,6,0	0/0:8,0:11:21.07:0,21,1178	./.	0/1:4,0:4:34.58:35,0,49	0/0:6,0:8:3.01:0,3,205	./.	0/0:6,0:8:3.01:0,3,205	0/1:8,1:9:99:206,0,203	1/1:11,4:15:3.01:215,3,0	0/0:8,0:11:9.03:0,9,520	0/0:15,0:16:21.07:0,21,1107	0/0:6,0:6:3.01:0,3,89	0/0:2,0:3:6.02:0,6,248	./.	0/0:9,0:10:6.02:0,6,111	./.	0/0:11,0:11:12.04:0,12,526	0/0:12,0:15:15.05:0,15,903	0/0:10,0:10:12.04:0,12,654	0/0:8,0:8:8.24:0,8,319
chr10	34763873	.	T	TG	136.44	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.507;DP=641;FS=1.656;HRun=1;HaplotypeScore=60.7069;InbreedingCoeff=0.9542;MQ=86.32;MQ0=0;MQRankSum=-0.245;QD=19.49;ReadPosRankSum=3.308;VQSLOD=4.0806;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:45.15:0,45,583	1/1:1,6:7:15.05:225,15,0	0/0:23,0:23:59.03:0,59,741	0/0:20,0:20:56.72:0,57,668	0/0:29,0:29:84.25:0,84,1073	0/0:29,0:28:87.28:0,87,1129	0/0:20,0:20:54.16:0,54,687	0/0:31,0:31:81.26:0,81,1051	0/0:18,0:18:51.14:0,51,634	0/0:31,0:31:84.27:0,84,1090	0/0:28,0:28:81.26:0,81,1052	0/0:29,0:29:81.26:0,81,1052	0/0:30,0:30:81.26:0,81,1052	0/0:23,0:23:69.22:0,69,896	0/0:23,0:22:69.19:0,69,859	0/0:18,0:18:54.18:0,54,700	0/0:25,0:25:66.21:0,66,853	0/0:12,0:12:36.12:0,36,467	0/0:25,0:25:69.22:0,69,895	0/0:19,0:19:54.17:0,54,695	0/0:31,0:31:90.28:0,90,1153	0/0:24,0:24:72.23:0,72,935	0/0:24,0:24:72.23:0,72,933	0/0:27,0:27:81.26:0,81,1049	0/0:22,0:22:66.21:0,66,857	0/0:25,0:25:75.24:0,75,974	0/0:29,0:29:87.28:0,87,1129	0/0:4,0:4:12.04:0,12,156
chr10	34767258	.	A	ACTCT	10092.47	PASS	AB=0.683;AC=38;AF=0.679;AN=56;BaseQRankSum=-2.115;DP=708;FS=3.124;HRun=0;HaplotypeScore=145.2896;InbreedingCoeff=0.0673;MQ=66.69;MQ0=14;MQRankSum=-1.113;QD=17.31;ReadPosRankSum=-1.093;VQSLOD=4.0727;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:24:3:38,3,0	0/0:4,0:9:17.97:0,18,162	0/0:30,0:16:2.02:0,2,85	0/0:59,0:26:18.03:0,18,210	1/1:16,8:26:8.92:200,9,0	1/1:10,13:28:0.83:576,1,0	1/1:15,0:17:11.62:125,12,0	1/1:35,5:42:35.40:435,35,0	0/1:17,14:33:15.06:666,0,15	1/1:14,11:26:45.15:985,45,0	1/1:13,14:31:41.51:747,42,0	1/1:10,0:23:33.08:572,33,0	1/1:12,21:35:49.35:1099,49,0	0/1:8,4:14:69.66:70,0,107	0/1:12,13:27:60.23:683,0,60	0/1:8,4:15:27.64:292,0,28	0/1:15,9:26:54.22:272,0,54	0/1:5,6:12:9.83:301,0,10	0/1:16,0:21:27.38:262,0,27	0/1:19,20:40:50.54:613,0,51	0/1:8,2:20:36.62:85,0,37	1/1:6,9:18:8.70:156,9,0	1/1:6,0:15:3.01:52,3,0	1/1:8,5:13:3.01:72,3,0	0/0:21,0:25:35.63:0,36,683	1/1:9,13:27:47.88:996,48,0	0/1:16,8:29:1.46:525,0,1	1/1:1,2:16:15.02:271,15,0
chr10	34767291	.	G	GAC	743.85	PASS	AB=0.983;AC=10;AF=0.179;AN=56;BaseQRankSum=7.348;DP=758;FS=3.296;HRun=0;HaplotypeScore=154.6937;InbreedingCoeff=0.0096;MQ=59.21;MQ0=23;MQRankSum=-4.310;QD=2.51;ReadPosRankSum=1.327;VQSLOD=2.5524;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:13:0,13,159	1/1:2,11:13:24.07:302,24,0	0/0:67,0:24:34.17:0,34,360	0/1:96,1:30:56.70:57,0,230	0/1:22,0:22:58.28:58,0,65	0/1:36,0:36:57.10:57,0,118	0/1:20,0:20:82.26:82,0,84	0/1:19,0:21:12.16:12,0,301	0/1:29,0:29:60.37:60,0,134	0/0:29,0:29:63.14:0,63,730	0/0:30,0:30:49.16:0,49,469	0/0:24,0:25:32.85:0,33,376	0/0:34,0:34:64.28:0,64,691	0/0:19,0:19:35.92:0,36,389	0/0:26,0:26:60.18:0,60,712	0/0:20,0:20:53.92:0,54,598	0/1:19,0:19:21.01:21,0,123	0/0:11,0:11:11.16:0,11,198	0/0:13,0:13:5.81:0,6,122	0/1:33,5:37:99:243,0,240	0/0:23,0:23:18.41:0,18,357	0/0:12,0:12:13.58:0,14,131	0/0:18,0:17:18.05:0,18,247	0/0:10,0:10:18:0,18,215	0/0:22,0:22:51.15:0,51,602	0/0:28,0:27:63.51:0,64,715	0/0:28,0:28:47.81:0,48,500	0/0:23,0:23:39.06:0,39,411
chr10	34770130	.	T	TCACA	4058.71	PASS	AB=0.753;AC=45;AF=0.865;AN=52;BaseQRankSum=-0.155;DP=612;FS=0.000;HRun=0;HaplotypeScore=121.4600;InbreedingCoeff=-0.1267;MQ=62.72;MQ0=38;MQRankSum=0.127;QD=8.47;ReadPosRankSum=-0.259;VQSLOD=2.8062;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:28:27.09:382,27,0	1/1:10,0:8:9.03:124,9,0	./.	./.	0/1:14,1:22:0.01:0,0,0	1/1:14,4:23:9.65:133,10,0	1/1:20,0:20:9.01:102,9,0	1/1:26,0:27:15.40:142,15,0	1/1:5,2:10:6.02:104,6,0	0/1:15,0:19:15.22:231,0,15	0/1:12,1:15:43.93:146,0,44	1/1:11,0:11:14.97:173,15,0	0/1:8,7:17:32.29:139,0,32	1/1:6,3:11:5.85:84,6,0	0/1:11,3:14:40.48:65,0,40	0/1:9,8:18:99:329,0,108	1/1:9,6:18:9.91:158,10,0	1/1:9,6:17:14.79:294,15,0	1/1:17,0:16:9.50:142,10,0	1/1:14,0:22:3.01:52,3,0	1/1:24,0:22:9.50:126,10,0	1/1:10,6:18:4.69:164,5,0	1/1:17,0:17:12.04:162,12,0	1/1:18,1:31:6.02:104,6,0	1/1:15,0:14:6.01:96,6,0	1/1:22,0:21:17.83:222,18,0	1/1:5,1:11:10.85:179,11,0	0/1:14,4:19:99:207,0,118
chr10	34771702	.	CTATA	C	12001.86	PASS	AC=44;AF=0.815;AN=54;BaseQRankSum=-5.848;DP=394;FS=0.000;HRun=0;HaplotypeScore=75.2476;InbreedingCoeff=0.9110;MQ=69.30;MQ0=2;MQRankSum=-1.724;QD=34.79;ReadPosRankSum=1.376;VQSLOD=4.1670;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:12:29.84:0,30,684	1/1:1,9:10:27.09:456,27,0	./.	0/0:19,0:15:16.40:0,16,230	1/1:3,14:17:39.08:626,39,0	1/1:3,11:14:27.05:424,27,0	1/1:2,5:7:9.03:152,9,0	1/1:8,17:25:48.12:728,48,0	1/1:1,10:11:24.08:405,24,0	1/1:3,16:19:48.14:761,48,0	1/1:2,19:21:54.18:907,54,0	0/0:1,0:4:8.23:0,8,37	1/1:2,10:12:30.10:505,30,0	1/1:0,10:10:27.09:456,27,0	1/1:2,9:11:24.08:405,24,0	1/1:1,12:13:23.85:405,24,0	1/1:1,15:17:30.10:484,30,0	1/1:2,12:14:33.11:557,33,0	1/1:8,9:16:26.87:361,27,0	1/1:6,14:20:39.13:658,39,0	1/1:2,8:10:21.07:354,21,0	1/1:2,7:9:15.05:253,15,0	0/0:1,0:6:8.23:0,8,37	0/0:2,0:4:4.78:0,5,18	1/1:3,19:24:57.18:917,57,0	1/1:5,10:16:33.10:512,33,0	1/1:4,25:28:66.22:1091,66,0	1/1:4,12:17:36.11:585,36,0
chr10	34772178	.	G	GGGACT	4087.60	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.617;DP=752;FS=9.005;HRun=0;HaplotypeScore=138.8305;InbreedingCoeff=0.9957;MQ=81.31;MQ0=0;MQRankSum=-10.608;QD=63.87;ReadPosRankSum=-0.087;VQSLOD=4.5840;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:13,37:50:99:3016,102,0	1/1:2,12:14:36.12:1072,36,0	0/0:37,0:37:99:0,105,2166	0/0:23,0:23:56.93:0,57,1190	0/0:29,0:29:81.26:0,81,1643	0/0:30,0:30:84.29:0,84,1787	0/0:29,0:29:78.24:0,78,1539	0/0:35,0:35:96.33:0,96,1988	0/0:22,0:22:66.23:0,66,1384	0/0:35,0:35:99:0,102,2086	0/0:12,0:12:36.10:0,36,696	0/0:34,0:34:99:0,99,2042	0/0:33,0:33:96.33:0,96,2042	0/0:18,0:18:48.12:0,48,956	0/0:33,0:33:90.31:0,90,1919	0/0:23,0:23:69.24:0,69,1448	0/0:35,0:35:99:0,105,2053	0/0:24,0:24:66.19:0,66,1330	0/0:20,0:20:57.17:0,57,1115	0/0:28,0:28:81.26:0,81,1638	0/0:30,0:30:87.30:0,87,1783	0/0:29,0:29:81.28:0,81,1704	0/0:18,0:18:51.17:0,51,1066	0/0:18,0:18:48.09:0,48,952	0/0:31,0:31:87.30:0,87,1818	0/0:30,0:30:90.31:0,90,1871	0/0:24,0:24:72.24:0,72,1473	0/0:8,0:8:18.06:0,18,372
chr10	34772367	.	A	AC	18807	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=9.761;DP=712;FS=1.983;HRun=1;HaplotypeScore=138.9201;InbreedingCoeff=0.9959;MQ=80.35;MQ0=0;MQRankSum=-3.752;QD=41.43;ReadPosRankSum=0.536;VQSLOD=4.4116;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,102,1305	0/0:9,0:9:24.06:0,24,296	0/0:24,0:24:69.17:0,69,830	0/0:17,0:17:48.08:0,48,553	0/0:34,0:34:99:0,99,1269	1/1:3,16:19:54.16:770,54,0	1/1:2,18:20:54.18:809,54,0	1/1:3,27:30:81.27:1208,81,0	0/0:30,0:30:90.27:0,90,1150	1/1:3,29:32:93.31:1383,93,0	1/1:2,26:28:81.16:1150,81,0	0/0:38,0:38:99:0,114,1453	1/1:3,35:38:99:1640,114,0	1/1:2,19:21:63.17:916,63,0	1/1:3,37:40:99:1741,120,0	1/1:4,26:30:90.27:1286,90,0	0/0:24,0:24:66.08:0,66,832	1/1:1,10:11:17.36:434,17,0	1/1:1,27:28:81.27:1195,81,0	1/1:4,20:24:66.22:981,66,0	1/1:2,30:32:93.28:1352,93,0	1/1:5,21:26:63.21:939,63,0	0/0:20,0:20:57.19:0,57,740	0/0:26,0:26:78.23:0,78,985	1/1:2,21:23:66.13:919,66,0	1/1:3,19:22:63.21:925,63,0	1/1:6,19:24:69.05:936,69,0	1/1:0,5:5:15.05:225,15,0
chr10	34772431	.	CGT	C	19349.14	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=17.936;DP=760;FS=0.591;HRun=0;HaplotypeScore=151.7523;InbreedingCoeff=0.9852;MQ=86.57;MQ0=0;MQRankSum=-9.955;QD=37.79;ReadPosRankSum=3.265;VQSLOD=6.0605;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,39:41:99:1503,105,0	1/1:1,5:6:12.04:172,12,0	0/0:32,0:33:99:0,99,1610	0/0:28,0:28:75.26:0,75,1347	0/0:35,0:35:99:0,99,1774	1/1:2,23:25:66.22:945,66,0	1/1:2,25:27:69.23:987,69,0	1/1:2,26:28:75.25:1074,75,0	0/0:37,0:37:99:0,108,1978	1/1:3,28:31:84.28:1203,84,0	1/1:2,14:16:36.12:515,36,0	0/0:29,0:29:87.30:0,87,1589	1/1:2,34:36:99:1448,102,0	1/1:1,23:24:69.23:987,69,0	1/1:4,44:48:99:1800,126,0	1/1:2,27:29:81.20:1115,81,0	0/0:37,0:37:99:0,108,1953	1/1:1,18:19:51.17:730,51,0	1/1:3,11:14:39.12:539,39,0	1/1:4,25:29:69.23:985,69,0	1/1:0,30:30:84.28:1203,84,0	1/1:2,22:24:60.20:859,60,0	0/0:25,0:25:72.25:0,72,1320	0/0:24,0:24:69.24:0,69,1265	1/1:2,19:21:51.17:730,51,0	1/1:1,32:33:93.31:1331,93,0	1/1:2,26:28:78.22:1094,78,0	1/1:0,3:3:9.03:129,9,0
chr10	34772836	.	CAG	C	3135.77	PASS	AB=0.826;AC=32;AF=0.593;AN=54;BaseQRankSum=9.347;DP=603;FS=0.000;HRun=0;HaplotypeScore=161.9629;InbreedingCoeff=0.5352;MQ=49.77;MQ0=32;MQRankSum=-1.846;QD=9.47;ReadPosRankSum=0.244;VQSLOD=3.1111;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,22:25:32.48:400,32,0	1/1:3,3:6:9.48:107,9,0	0/0:48,1:14:17.51:0,18,496	0/0:59,0:20:27.64:0,28,558	0/0:14,0:13:20.52:0,21,278	1/1:8,5:13:11.21:82,11,0	0/1:23,1:23:94.02:146,0,94	1/1:12,0:31:63.03:553,63,0	0/0:17,0:17:15.10:0,15,633	1/1:10,3:12:27.73:223,28,0	0/1:1,6:16:0:0,0,0	0/0:25,0:25:51.13:0,51,867	1/1:11,6:17:31.95:232,32,0	0/1:8,0:8:40.83:74,0,41	1/1:13,2:14:19.41:183,19,0	0/1:8,3:11:38.90:99,0,39	0/0:29,0:29:62.73:0,63,1018	0/1:10,2:12:12.20:123,0,12	1/1:21,1:12:7.24:120,7,0	1/1:17,4:20:6.50:147,6,0	1/1:14,15:20:8.95:84,9,0	./.	0/0:25,0:24:43.21:0,43,721	0/0:34,0:34:60.64:0,61,1063	1/1:13,2:14:20.61:172,21,0	0/1:17,4:20:10.99:306,0,11	1/1:13,5:18:32.11:233,32,0	1/1:2,0:2:5.99:48,6,0
chr10	34772842	.	CAG	C	3131.19	PASS	AB=0.854;AC=31;AF=0.574;AN=54;BaseQRankSum=7.721;DP=599;FS=1.503;HRun=0;HaplotypeScore=160.3867;InbreedingCoeff=0.5162;MQ=47.49;MQ0=33;MQRankSum=-2.537;QD=9.43;ReadPosRankSum=0.146;VQSLOD=3.0832;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:25,1:25:25.17:184,25,0	1/1:9,0:9:18.47:180,18,0	0/0:44,0:11:27.09:0,27,442	0/0:54,0:16:10.99:0,11,461	0/0:17,0:16:23.02:0,23,259	1/1:10,4:14:14.18:113,14,0	0/1:14,3:19:85.80:137,0,86	1/1:42,0:31:57.97:466,58,0	0/0:18,0:18:32.11:0,32,591	1/1:12,3:13:31.07:246,31,0	0/1:10,5:15:0:0,0,0	0/0:22,0:23:42.14:0,42,786	1/1:13,5:18:35.09:269,35,0	0/1:6,0:6:42.40:62,0,42	1/1:12,2:14:15.45:181,15,0	0/1:11,2:13:35.22:100,0,35	0/0:30,0:29:40.70:0,41,919	0/1:11,2:13:2.14:136,0,2	0/1:20,1:11:10.66:118,0,11	1/1:16,4:21:22.44:268,22,0	1/1:29,0:20:8.87:83,9,0	./.	0/0:27,0:26:42.22:0,42,623	0/0:33,0:33:54.66:0,55,1022	1/1:11,1:13:17.17:183,17,0	0/1:14,5:19:28.52:311,0,29	1/1:10,5:18:32.71:241,33,0	1/1:2,0:2:5.99:49,6,0
chr10	34772844	.	GACAGAC	G	2013.24	PASS	AB=1.000;AC=25;AF=0.446;AN=56;BaseQRankSum=7.640;DP=600;FS=8.089;HRun=0;HaplotypeScore=188.0051;InbreedingCoeff=0.0825;MQ=46.45;MQ0=32;MQRankSum=-1.800;QD=5.94;ReadPosRankSum=1.302;VQSLOD=2.0958;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:21,5:25:29.43:322,29,0	0/1:9,0:9:8.93:9,0,132	0/0:42,0:9:20.80:0,21,154	0/0:53,0:15:20.08:0,20,182	0/0:19,0:18:23.69:0,24,163	1/1:14,0:14:13.76:127,14,0	0/1:20,0:19:95.43:97,0,95	1/1:42,0:31:48.04:341,48,0	0/0:17,0:17:18.48:0,18,545	0/1:16,0:14:8.07:142,0,8	0/0:15,0:15:0:0,0,0	0/0:23,0:23:42.01:0,42,722	0/1:17,0:17:45.31:45,0,70	0/1:6,0:6:12.09:93,0,12	0/1:16,0:15:6.33:147,0,6	0/1:13,0:13:0.60:1,0,90	0/0:31,0:29:48.11:0,48,780	0/1:13,0:13:51.49:51,0,63	0/1:22,0:12:9.12:81,0,9	0/1:21,0:20:9.20:113,0,9	0/1:27,0:20:11.16:32,0,11	1/1:21,0:19:0.47:1,0,0	0/0:27,0:26:35.27:0,35,348	0/0:33,0:33:54.11:0,54,893	0/1:14,0:13:17.20:154,0,17	1/1:21,0:20:11.11:212,11,0	0/1:19,0:19:11.73:174,0,12	1/1:2,0:2:5.95:43,6,0
chr10	34773944	.	C	CA	736.31	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=0.305;DP=661;FS=15.439;HRun=8;HaplotypeScore=80.9031;InbreedingCoeff=0.8206;MQ=74.46;MQ0=0;MQRankSum=-1.033;QD=26.30;ReadPosRankSum=0.326;VQSLOD=2.6512;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,27:28:72.21:831,72,0	0/0:8,0:8:21:0,21,192	0/0:20,0:20:10.36:0,10,240	0/0:15,0:14:4.49:0,4,159	0/0:35,0:35:90.04:0,90,820	0/0:26,0:26:69:0,69,623	0/0:26,0:26:72.01:0,72,654	0/0:36,0:36:90.02:0,90,822	0/0:20,0:20:54:0,54,486	0/0:31,0:31:84.04:0,84,769	0/0:18,0:18:48.02:0,48,439	0/0:21,0:21:63.03:0,63,577	0/0:22,0:22:60.03:0,60,549	0/0:24,0:24:63.03:0,63,577	0/0:24,0:24:60.01:0,60,545	0/0:20,0:20:57.02:0,57,518	0/0:30,0:30:81.03:0,81,741	0/0:13,0:13:32.97:0,33,295	0/0:21,0:21:51:0,51,464	0/0:37,0:37:96.05:0,96,879	0/0:18,0:18:48.02:0,48,439	0/0:25,0:26:71.07:0,71,637	0/0:23,0:23:57.02:0,57,522	0/0:20,0:20:51.01:0,51,467	0/0:26,0:26:75.02:0,75,681	0/0:22,0:22:53.52:0,54,476	0/0:45,0:45:99:0,114,1038	0/0:5,0:5:12.01:0,12,110
chr10	34774664	.	TG	T	16461.10	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=15.142;DP=611;FS=5.357;HRun=2;HaplotypeScore=89.2203;InbreedingCoeff=0.9989;MQ=82.80;MQ0=0;MQRankSum=-3.107;QD=35.94;ReadPosRankSum=1.876;VQSLOD=5.3771;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,20:20:48.16:623,48,0	1/1:0,12:12:36.12:468,36,0	0/0:20,0:20:54.16:0,54,762	0/0:15,0:15:19.56:0,20,437	0/0:27,0:27:81.27:0,81,1214	1/1:1,21:22:54.18:701,54,0	1/1:0,21:21:51.17:662,51,0	1/1:0,33:33:99:1270,99,0	0/0:21,0:21:63.20:0,63,924	1/1:0,30:30:90.27:1138,90,0	1/1:1,25:26:66.21:851,66,0	0/0:20,0:20:60.20:0,60,899	1/1:1,30:31:84.27:1091,84,0	1/1:0,17:17:45.15:584,45,0	1/1:1,30:31:84.27:1091,84,0	1/1:1,17:18:51.17:662,51,0	0/0:14,0:14:39.13:0,39,578	1/1:0,15:15:42.14:545,42,0	1/1:0,17:17:51.17:662,51,0	1/1:1,24:25:69.22:893,69,0	1/1:0,24:24:69.22:896,69,0	1/1:0,29:29:81.26:1051,81,0	0/0:24,0:24:72.24:0,72,1078	0/0:12,0:12:36.12:0,36,535	1/1:0,16:16:48.16:623,48,0	1/1:0,33:33:99:1286,99,0	1/1:0,27:27:72.23:935,72,0	1/1:0,11:11:33.11:428,33,0
chr10	34776863	.	CA	C	6239.77	PASS	AB=0.726;AC=37;AF=0.661;AN=56;BaseQRankSum=4.693;DP=549;FS=14.067;HRun=11;HaplotypeScore=62.2897;InbreedingCoeff=0.5998;MQ=61.84;MQ0=8;MQRankSum=1.541;QD=13.71;ReadPosRankSum=1.188;VQSLOD=3.4570;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,0:31:44.80:129,45,0	0/0:14,0:14:36.09:0,36,383	0/0:10,0:7:7.14:0,7,77	0/0:7,0:6:11.10:0,11,97	0/0:19,1:19:14.33:0,14,325	1/1:2,14:17:34.97:277,35,0	1/1:2,19:20:41.78:344,42,0	1/1:6,21:27:53.88:437,54,0	0/0:12,0:12:29.99:0,30,296	1/1:7,15:22:41.91:345,42,0	0/1:10,16:26:30.49:314,0,30	0/0:15,0:15:16.25:0,16,331	1/1:4,12:16:9.96:287,10,0	0/1:10,15:25:19.04:275,0,19	1/1:2,17:19:41.93:345,42,0	1/1:1,13:15:29:228,29,0	0/1:19,2:21:1.33:1,0,382	1/1:6,21:25:33.46:485,33,0	1/1:5,16:20:44.89:367,45,0	1/1:3,31:32:71.83:583,72,0	0/1:3,14:17:16.02:297,0,16	1/1:0,17:17:44.95:369,45,0	0/0:15,1:16:5.89:0,6,251	0/1:24,2:25:6.55:7,0,461	1/1:3,15:18:9.95:288,10,0	1/1:4,16:19:44.93:369,45,0	1/1:5,20:25:41.91:345,42,0	1/1:2,6:6:17.98:148,18,0
chr10	34780149	.	AT	A	2737.52	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.445;DP=722;FS=6.377;HRun=3;HaplotypeScore=67.7117;InbreedingCoeff=0.9991;MQ=86.36;MQ0=0;MQRankSum=-2.685;QD=29.76;ReadPosRankSum=2.190;VQSLOD=3.4305;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:42:99:0,123,1711	0/0:11,0:11:33.09:0,33,440	0/0:32,0:32:93.28:0,93,1273	0/0:16,0:16:35.13:0,35,451	1/1:2,30:32:87.21:1059,87,0	0/0:25,0:25:72.24:0,72,1037	0/0:25,0:25:72.23:0,72,1018	0/0:32,0:31:90.28:0,90,1247	1/1:2,27:29:69.22:855,69,0	0/0:28,0:28:84.28:0,84,1210	0/0:19,0:19:54.18:0,54,777	0/0:24,0:24:69.23:0,69,993	0/0:19,0:19:54.18:0,54,775	0/0:28,0:28:78.25:0,78,1105	0/0:32,0:32:96.31:0,96,1364	0/0:30,0:30:90.26:0,90,1224	1/1:0,31:31:78.25:966,78,0	0/0:18,0:18:48.10:0,48,630	0/0:18,0:18:51.17:0,51,733	0/0:27,0:27:78.25:0,78,1107	0/0:28,0:28:84.28:0,84,1204	0/0:25,0:25:75.25:0,75,1079	0/0:26,0:26:75.24:0,75,1061	0/0:31,0:31:90.30:0,90,1293	0/0:26,0:26:78.25:0,78,1103	0/0:25,0:25:75.24:0,75,1060	0/0:34,0:34:99:0,99,1387	0/0:8,0:8:24.08:0,24,343
chr10	34781033	.	TAC	T	365.09	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.607;DP=674;FS=1.175;HRun=0;HaplotypeScore=76.7436;InbreedingCoeff=0.9957;MQ=83.69;MQ0=0;MQRankSum=-2.151;QD=36.51;ReadPosRankSum=2.164;VQSLOD=5.9027;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:51.17:0,51,966	1/1:0,10:10:30.10:460,30,0	0/0:19,0:19:57.14:0,57,962	0/0:21,0:21:57.19:0,57,985	0/0:23,0:23:69.24:0,69,1324	0/0:34,0:34:99:0,99,1901	0/0:13,0:13:39.13:0,39,735	0/0:39,0:39:99:0,105,2018	0/0:23,0:23:66.21:0,66,1241	0/0:26,0:26:78.27:0,78,1503	0/0:28,0:28:84.27:0,84,1588	0/0:23,0:23:69.24:0,69,1332	0/0:31,0:31:90.31:0,90,1738	0/0:24,0:24:72.25:0,72,1388	0/0:18,0:18:54.19:0,54,1043	0/0:25,0:25:75.26:0,75,1449	0/0:19,0:19:54.19:0,54,1042	0/0:9,0:9:24.08:0,24,464	0/0:29,0:29:75.22:0,75,1353	0/0:54,0:54:99:0,163,3120	0/0:15,0:15:45.14:0,45,836	0/0:30,0:30:87.28:0,87,1626	0/0:28,0:28:84.29:0,84,1622	0/0:20,0:20:60.18:0,60,1101	0/0:17,0:17:48.16:0,48,927	0/0:29,0:29:87.29:0,87,1649	0/0:39,0:39:99:0,117,2238	0/0:10,0:11:24.89:0,25,572
chr10	34781344	.	G	GA	17971.16	PASS	AB=1.000;AC=47;AF=0.839;AN=56;BaseQRankSum=-10.391;DP=562;FS=2.914;HRun=4;HaplotypeScore=47.5383;InbreedingCoeff=0.8879;MQ=73.95;MQ0=0;MQRankSum=-3.494;QD=36.16;ReadPosRankSum=2.668;VQSLOD=5.2096;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,21:21:57.19:780,57,0	1/1:0,7:7:18.06:246,18,0	0/1:11,0:11:6.26:6,0,233	0/0:7,0:7:14.53:0,15,145	1/1:0,29:29:87.20:1148,87,0	1/1:0,21:21:54.18:738,54,0	1/1:0,12:12:36.12:493,36,0	1/1:1,22:23:66.21:886,66,0	1/1:0,25:25:63.21:862,63,0	1/1:1,20:21:60.19:805,60,0	1/1:1,35:36:96.32:1313,96,0	0/0:16,0:16:45.11:0,45,501	1/1:0,14:14:36.12:493,36,0	1/1:0,12:12:33.11:452,33,0	1/1:0,20:20:60.20:821,60,0	1/1:3,15:18:42.14:575,42,0	1/1:0,30:30:87.29:1189,87,0	1/1:4,16:20:52.41:694,52,0	1/1:2,17:19:51.16:686,51,0	1/1:4,32:36:96.32:1312,96,0	1/1:1,15:16:39.13:534,39,0	1/1:1,20:21:57.19:780,57,0	0/0:27,0:27:75.19:0,75,832	0/0:15,0:15:42.11:0,42,467	1/1:0,17:17:51.17:698,51,0	1/1:1,23:24:69.23:943,69,0	1/1:3,31:34:81.16:1108,81,0	1/1:0,10:10:30.10:410,30,0
chr10	34782067	.	TCTC	T	2175.53	PASS	AB=0.515;AC=5;AF=0.089;AN=56;BaseQRankSum=8.706;DP=586;FS=5.462;HRun=0;HaplotypeScore=84.4740;InbreedingCoeff=0.7815;MQ=84.80;MQ0=0;MQRankSum=-4.032;QD=41.05;ReadPosRankSum=2.186;VQSLOD=5.0773;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:42.13:0,42,895	0/0:9,0:9:27.09:0,27,622	0/0:21,0:21:59.68:0,60,1258	0/0:22,0:24:68.26:0,68,1329	0/0:25,0:25:75.26:0,75,1726	0/0:30,0:30:90.30:0,90,2032	0/0:14,0:14:39.13:0,39,868	0/0:22,0:22:60.19:0,60,1340	0/0:15,0:15:45.15:0,45,1033	0/0:30,0:30:87.30:0,87,1968	0/0:20,0:20:57.20:0,57,1277	0/1:1,16:17:21.03:719,0,21	0/0:33,0:33:96.27:0,96,2102	0/0:19,0:19:57.20:0,57,1296	0/0:14,0:14:39.13:0,39,881	0/0:22,0:22:66.23:0,66,1461	0/0:24,0:24:63.22:0,63,1453	0/0:13,0:13:39.11:0,39,846	0/0:23,0:23:69.24:0,69,1591	0/0:20,0:20:60.21:0,60,1366	0/0:18,0:18:54.19:0,54,1246	0/0:17,0:17:48.16:0,48,1107	1/1:0,25:25:65.91:1125,66,0	1/1:0,11:11:27.09:461,27,0	0/0:25,0:25:75.26:0,75,1712	0/0:30,0:30:90.31:0,90,2076	0/0:29,0:29:87.30:0,87,2004	0/0:22,0:22:66.23:0,66,1518
chr10	34784715	.	TAA	T	11010.16	PASS	AB=0.938;AC=43;AF=0.768;AN=56;BaseQRankSum=5.399;DP=515;FS=1.502;HRun=11;HaplotypeScore=99.0726;InbreedingCoeff=0.8862;MQ=55.90;MQ0=1;MQRankSum=-5.459;QD=25.49;ReadPosRankSum=1.482;VQSLOD=4.9229;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:15:24.63:0,25,344	0/0:0,0:7:17.47:0,17,60	0/1:14,1:13:18.96:19,0,199	0/0:5,0:5:12.04:0,12,157	1/1:4,24:28:75.16:790,75,0	1/1:5,11:16:36.08:383,36,0	1/1:1,11:12:36.07:374,36,0	1/1:7,16:23:51.08:527,51,0	1/1:1,21:23:68.90:706,69,0	1/1:1,12:13:36.09:383,36,0	1/1:4,30:34:93.22:989,93,0	0/0:11,0:11:33.11:0,33,504	1/1:4,7:11:21.03:223,21,0	1/1:2,15:17:51.13:542,51,0	1/1:2,15:18:47.85:491,48,0	1/1:3,14:17:45.09:471,45,0	1/1:6,16:21:47.97:509,48,0	1/1:1,7:8:21.05:223,21,0	1/1:8,14:23:50.57:519,51,0	1/1:11,30:41:99:1085,105,0	1/1:2,5:7:15.02:160,15,0	1/1:3,9:12:27.06:287,27,0	0/0:37,0:37:95.81:0,96,1434	0/0:8,0:8:18.05:0,18,252	1/1:4,16:20:51.12:543,51,0	1/1:6,19:25:63.11:660,63,0	1/1:4,26:31:83.51:864,84,0	1/1:7,9:16:26.88:262,27,0
chr10	34784750	.	C	CA	13781.49	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=0.975;DP=517;FS=0.970;HRun=6;HaplotypeScore=82.7541;InbreedingCoeff=0.9925;MQ=69.21;MQ0=0;MQRankSum=-7.789;QD=31.75;ReadPosRankSum=2.552;VQSLOD=5.2416;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,13:14:36.07:434,36,0	1/1:2,4:6:15.05:188,15,0	0/0:20,0:20:53.80:0,54,507	0/0:16,0:16:33.08:0,33,406	1/1:3,23:26:57.17:702,57,0	1/1:1,15:16:42.13:528,42,0	1/1:2,13:15:39.12:490,39,0	1/1:4,23:27:72.22:894,72,0	1/1:1,25:26:72.23:900,72,0	1/1:1,7:8:24.07:292,24,0	1/1:7,31:38:81.21:991,81,0	0/0:17,0:17:48.11:0,48,490	1/1:2,12:14:39.12:489,39,0	1/1:0,19:19:51.16:637,51,0	1/1:1,15:16:39.12:481,39,0	1/1:1,20:21:57.14:696,57,0	1/1:2,14:16:42.13:528,42,0	1/1:1,14:15:36.12:453,36,0	1/1:1,15:16:45.13:554,45,0	1/1:2,32:34:93.26:1151,93,0	1/1:0,10:10:18.06:226,18,0	1/1:0,11:11:33.11:415,33,0	0/0:23,0:23:60.12:0,60,605	0/0:7,0:7:21.05:0,21,214	1/1:1,14:15:39.08:473,39,0	1/1:0,22:22:66.21:827,66,0	1/1:4,31:35:87.28:1093,87,0	1/1:5,9:14:27.09:340,27,0
chr10	34787958	.	CA	C	8670.87	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=11.570;DP=506;FS=2.241;HRun=8;HaplotypeScore=48.5138;InbreedingCoeff=0.9686;MQ=71.61;MQ0=0;MQRankSum=-1.539;QD=23.95;ReadPosRankSum=3.006;VQSLOD=5.3987;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:17.87:0,18,217	0/0:6,0:6:18.06:0,18,217	0/0:9,0:9:20.73:0,21,247	0/0:8,0:8:24.07:0,24,289	0/0:27,1:28:49.24:0,49,864	1/1:2,20:22:48.08:464,48,0	1/1:1,12:13:30.05:290,30,0	1/1:2,24:26:72.11:695,72,0	0/0:21,1:22:31.19:0,31,642	1/1:3,19:22:54.06:516,54,0	1/1:1,29:30:81.12:782,81,0	0/0:17,0:17:48.15:0,48,576	1/1:0,9:9:27.04:261,27,0	1/1:1,22:23:57.09:550,57,0	1/1:3,15:19:42.06:406,42,0	1/1:1,12:13:2.82:311,3,0	0/0:11,0:11:30.09:0,30,362	1/1:3,13:16:30.05:290,30,0	1/1:6,14:20:42.06:406,42,0	1/1:4,33:37:99:955,99,0	1/1:2,12:14:36.05:348,36,0	1/1:1,10:11:27.04:261,27,0	0/0:23,0:23:63.19:0,63,761	0/0:9,0:9:21.06:0,21,253	1/1:1,13:14:39.06:377,39,0	1/1:3,20:23:60.08:574,60,0	1/1:1,38:39:99:955,99,0	1/1:1,10:11:24.04:232,24,0
chr10	34788456	.	TA	T	7092.21	PASS	AB=1.000;AC=37;AF=0.661;AN=56;BaseQRankSum=-0.266;DP=528;FS=1.739;HRun=10;HaplotypeScore=62.2870;InbreedingCoeff=0.9156;MQ=70.24;MQ0=0;MQRankSum=1.704;QD=19.07;ReadPosRankSum=1.421;VQSLOD=5.7256;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:44.60:0,45,446	0/0:5,0:5:9.02:0,9,100	0/1:14,0:14:4.13:4,0,178	0/0:10,0:10:8.90:0,9,146	0/0:35,0:36:87:0,87,925	1/1:2,16:18:44.99:391,45,0	1/1:1,10:11:23.99:208,24,0	1/1:4,23:27:68.96:595,69,0	0/0:17,0:17:42.05:0,42,429	1/1:3,29:32:86.96:751,87,0	1/1:3,22:25:26.79:462,27,0	0/0:2,0:19:45.60:0,46,237	1/1:1,10:11:23.99:208,24,0	1/1:1,11:12:29.99:260,30,0	1/1:3,18:21:50.99:443,51,0	1/1:6,11:17:32.98:286,33,0	0/0:13,0:13:10.36:0,10,319	1/1:3,14:17:29.99:260,30,0	1/1:3,14:17:41.98:365,42,0	1/1:7,27:34:74.97:650,75,0	1/1:2,11:13:29.98:260,30,0	1/1:1,13:14:29.97:260,30,0	0/0:3,0:26:59.59:0,60,309	0/0:7,0:13:20.05:0,20,118	1/1:4,20:24:50.92:442,51,0	1/1:4,23:27:68.97:594,69,0	1/1:7,22:29:50.99:443,51,0	1/1:0,9:9:24:208,24,0
chr10	34789070	.	AC	A	3399.58	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=11.395;DP=822;FS=0.000;HRun=2;HaplotypeScore=79.0260;InbreedingCoeff=0.8384;MQ=75.28;MQ0=0;MQRankSum=-1.351;QD=31.19;ReadPosRankSum=0.914;VQSLOD=3.2621;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,160,2379	0/0:5,0:5:15.05:0,15,225	0/0:18,0:18:51.12:0,51,675	0/1:13,0:13:13.57:14,0,376	1/1:1,38:39:99:1361,105,0	0/0:19,0:19:54.18:0,54,809	0/0:33,0:33:96.33:0,96,1438	0/0:26,0:26:72.24:0,72,1060	1/1:0,33:33:90.29:1169,90,0	0/0:40,0:40:99:0,111,1663	0/0:21,0:21:63.21:0,63,944	0/0:27,0:27:81.27:0,81,1214	0/0:33,0:33:99:0,99,1483	0/0:35,0:35:99:0,102,1508	0/0:53,0:53:99:0,160,2365	0/0:24,0:24:72.24:0,72,1079	1/1:0,24:24:66.21:857,66,0	0/0:13,0:13:39.13:0,39,584	0/0:27,0:27:81.18:0,81,1166	0/0:32,0:32:96.32:0,96,1434	0/0:68,0:67:99:0,205,3010	0/0:34,0:34:99:0,102,1509	0/0:22,0:22:66.22:0,66,987	0/0:28,0:28:81.26:0,81,1191	0/0:29,0:29:87.29:0,87,1278	0/0:30,0:30:87.29:0,87,1302	0/0:30,0:29:84.28:0,84,1256	0/0:13,0:13:39.13:0,39,584
chr10	34791099	.	A	AT	21573.68	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-9.053;DP=706;FS=0.000;HRun=6;HaplotypeScore=58.0536;InbreedingCoeff=0.9836;MQ=84.15;MQ0=0;MQRankSum=-10.074;QD=32.49;ReadPosRankSum=5.934;VQSLOD=4.4294;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,42:47:99:1470,117,0	1/1:1,13:14:27.09:340,27,0	0/0:25,0:25:52.76:0,53,614	0/0:17,0:17:45.07:0,45,447	1/1:3,28:31:78.21:963,78,0	1/1:1,26:27:66.21:830,66,0	1/1:3,19:22:54.17:679,54,0	1/1:3,30:33:90.27:1111,90,0	1/1:0,31:31:90.29:1132,90,0	1/1:3,19:22:60.19:753,60,0	1/1:1,31:32:93.30:1170,93,0	1/1:1,21:22:51.16:642,51,0	1/1:3,29:32:81.26:1016,81,0	1/1:1,17:18:48.15:604,48,0	1/1:1,23:24:69.22:868,69,0	1/1:1,25:26:63.20:792,63,0	1/1:2,16:18:45.14:566,45,0	1/1:3,4:7:12.04:151,12,0	1/1:4,20:24:57.17:705,57,0	1/1:1,17:18:51.12:622,51,0	1/1:2,34:36:93.30:1170,93,0	1/1:3,27:30:75.24:943,75,0	1/1:4,21:25:57.18:717,57,0	1/1:1,25:26:75.24:944,75,0	1/1:3,22:25:60.19:755,60,0	1/1:0,28:28:81.25:1007,81,0	1/1:2,33:36:99:1245,99,0	1/1:0,10:10:30.10:377,30,0
chr10	34791513	.	CT	C	6114.36	PASS	AB=0.875;AC=37;AF=0.661;AN=56;BaseQRankSum=-0.808;DP=425;FS=5.400;HRun=9;HaplotypeScore=59.9183;InbreedingCoeff=0.8848;MQ=56.10;MQ0=4;MQRankSum=-1.103;QD=21.68;ReadPosRankSum=0.761;VQSLOD=5.6768;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:45.13:0,45,513	0/0:4,0:4:12.04:0,12,138	0/0:11,0:7:12.04:0,12,137	0/1:6,1:5:13.36:13,0,60	0/0:18,0:18:45.13:0,45,519	1/1:1,12:13:36.01:329,36,0	1/1:3,8:11:4.79:197,5,0	1/1:5,26:29:75.03:686,75,0	0/0:16,0:16:33.06:0,33,372	1/1:3,10:13:33.02:302,33,0	1/1:1,19:16:48.03:438,48,0	0/0:11,0:11:21.05:0,21,234	1/1:1,9:10:27.01:247,27,0	1/1:1,4:5:12:110,12,0	1/1:3,10:13:33:297,33,0	1/1:3,7:10:21:192,21,0	0/0:26,0:26:69.20:0,69,795	1/1:4,11:15:18.58:283,19,0	1/1:5,13:16:38.97:349,39,0	1/1:5,23:26:74.99:677,75,0	1/1:2,7:9:15:137,15,0	1/1:1,15:15:42.02:384,42,0	0/0:23,0:23:60.18:0,60,691	0/0:10,0:10:21.06:0,21,242	1/1:2,8:10:27.01:247,27,0	1/1:7,11:18:35.99:326,36,0	1/1:2,20:22:63.01:571,63,0	1/1:1,12:13:36.02:329,36,0
chr10	34791555	.	C	CT	11041.18	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-2.869;DP=418;FS=30.277;HRun=8;HaplotypeScore=49.5027;InbreedingCoeff=0.9045;MQ=55.55;MQ0=2;MQRankSum=-4.586;QD=27.60;ReadPosRankSum=3.194;VQSLOD=3.1236;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,27:30:77.59:869,78,0	1/1:1,7:6:15.04:173,15,0	0/0:13,0:11:30.01:0,30,272	0/0:5,0:5:8.30:0,8,62	1/1:1,25:25:72.04:808,72,0	1/1:0,13:13:33.10:381,33,0	1/1:2,3:5:12.04:137,12,0	1/1:8,13:21:54.15:608,54,0	1/1:0,12:12:26.98:310,27,0	1/1:3,19:22:57.17:658,57,0	1/1:4,20:20:45.06:491,45,0	1/1:1,11:12:30.09:343,30,0	1/1:0,6:6:18.05:208,18,0	1/1:0,10:10:30.09:344,30,0	1/1:2,10:12:30.08:336,30,0	1/1:1,11:12:33.10:381,33,0	1/1:4,21:25:57.17:656,57,0	1/1:6,5:11:21.04:230,21,0	1/1:5,9:14:27.06:301,27,0	1/1:2,23:23:66.14:737,66,0	1/1:3,4:6:12.91:129,13,0	1/1:2,14:15:39.03:431,39,0	1/1:0,21:21:54.16:621,54,0	1/1:1,4:5:12.04:138,12,0	1/1:0,14:14:30.02:327,30,0	1/1:2,17:19:54.15:615,54,0	1/1:4,14:18:48.11:533,48,0	1/1:3,8:11:24.07:277,24,0
chr10	34792499	.	GT	G	385.65	PASS	AB=0.893;AC=8;AF=0.143;AN=56;BaseQRankSum=2.641;DP=343;FS=1.277;HRun=13;HaplotypeScore=37.3231;InbreedingCoeff=0.6698;MQ=60.79;MQ0=7;MQRankSum=0.762;QD=5.01;ReadPosRankSum=2.704;VQSLOD=0.6208;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:29:63.83:0,64,387	0/0:8,0:10:17.69:0,18,135	0/0:13,0:6:9.46:0,9,80	0/0:13,0:7:8.62:0,9,46	1/1:2,15:17:15.33:220,15,0	0/0:3,0:4:5.85:0,6,43	0/0:10,0:12:17.82:0,18,150	0/1:21,4:24:0.28:0,0,276	1/1:3,9:12:20.63:153,21,0	0/0:15,0:14:24.02:0,24,226	0/0:11,0:11:27.04:0,27,263	0/0:7,0:7:17.96:0,18,160	0/0:10,0:11:20.87:0,21,189	0/0:6,0:5:12.02:0,12,116	0/0:6,0:7:17.86:0,18,160	0/0:8,0:8:18.03:0,18,175	1/1:3,7:11:11.50:145,12,0	0/0:5,0:5:12.02:0,12,117	0/0:11,0:11:21.03:0,21,200	0/0:18,0:19:41.89:0,42,388	0/1:11,1:12:3.93:4,0,112	0/0:11,0:12:14.85:0,15,127	0/0:8,0:7:9.01:0,9,88	0/0:10,0:10:12.02:0,12,117	0/0:11,1:13:13.97:0,14,277	0/0:22,0:21:42.04:0,42,396	0/0:7,0:7:12.02:0,12,117	0/0:13,0:13:30.02:0,30,284
chr10	34792612	.	AT	A	1372.87	PASS	AB=0.761;AC=17;AF=0.315;AN=54;BaseQRankSum=9.404;DP=275;FS=25.393;HRun=6;HaplotypeScore=43.5678;InbreedingCoeff=-0.3923;MQ=37.02;MQ0=56;MQRankSum=-4.867;QD=7.26;ReadPosRankSum=3.875;VQSLOD=-0.3607;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:16,11:19:99:239,0,264	0/1:4,1:4:23.17:23,0,70	0/0:14,0:9:15.04:0,15,186	0/0:24,0:8:23.97:0,24,247	0/1:7,1:5:23.04:23,0,69	0/0:5,0:5:15.05:0,15,197	0/0:6,0:4:12.04:0,12,158	0/1:14,2:12:28.31:28,0,345	0/0:5,0:1:3.01:0,3,39	0/0:7,0:5:15.03:0,15,182	0/0:3,0:2:6.02:0,6,79	./.	0/1:5,3:6:78.54:79,0,100	0/1:6,6:8:97.15:108,0,97	0/1:2,3:5:63.80:81,0,64	0/0:7,0:5:15.05:0,15,197	0/1:17,4:15:60.30:60,0,319	0/0:8,0:3:9.03:0,9,118	0/1:8,2:4:52.41:52,0,67	0/1:4,3:7:75.58:76,0,137	0/1:16,4:18:74.74:75,0,480	0/0:3,0:2:6.02:0,6,78	0/1:5,1:5:17.15:17,0,143	0/1:6,4:8:97.34:108,0,97	0/0:1,0:1:3.01:0,3,39	0/1:3,6:8:18.42:172,0,18	0/1:9,7:15:99:180,0,250	1/1:2,7:8:2.19:204,2,0
chr10	34796304	.	GAA	G	670.61	PASS	AB=0.560;AC=5;AF=0.096;AN=52;BaseQRankSum=3.102;DP=632;FS=0.000;HRun=2;HaplotypeScore=36.3945;InbreedingCoeff=0.5117;MQ=23.18;MQ0=260;MQRankSum=-3.229;QD=12.19;ReadPosRankSum=0.845;VQSLOD=0.5970;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:19:48.16:0,48,908	0/0:12,0:11:30.10:0,30,562	./.	./.	0/1:6,22:23:99:538,0,195	0/0:26,0:9:18.06:0,18,342	0/0:16,0:5:12:0,12,202	0/0:23,0:1:3.01:0,3,61	1/1:7,11:10:12.04:195,12,0	0/0:47,0:13:39.13:0,39,792	0/0:30,0:16:33.10:0,33,625	0/0:22,0:5:12.04:0,12,243	0/0:25,0:11:33.11:0,33,608	0/0:20,0:7:18.06:0,18,349	0/0:27,0:8:21.04:0,21,375	0/0:20,0:4:12.04:0,12,243	1/1:8,1:1:3.01:49,3,0	0/0:12,0:7:21.04:0,21,364	0/0:12,0:6:18.05:0,18,331	0/0:40,0:13:30.10:0,30,584	0/0:19,0:3:9.02:0,9,147	0/0:26,0:12:30.09:0,30,549	0/0:29,0:12:33.11:0,33,669	0/0:18,0:6:12.04:0,12,231	0/0:31,0:14:36.12:0,36,687	0/0:27,0:10:27.08:0,27,490	0/0:41,0:13:39.13:0,39,746	0/0:17,0:4:3.01:0,3,61
chr10	34798478	.	T	TC	282.37	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-3.014;DP=546;FS=0.000;HRun=1;HaplotypeScore=54.3293;InbreedingCoeff=0.9354;MQ=56.82;MQ0=13;MQRankSum=2.884;QD=25.67;ReadPosRankSum=0.468;VQSLOD=3.3407;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:60.19:0,60,775	1/1:0,11:11:26.94:376,27,0	0/0:30,0:7:18.06:0,18,225	0/0:24,0:4:9.01:0,9,99	0/0:35,0:35:81.23:0,81,1022	0/0:19,0:19:54.16:0,54,687	0/0:20,0:20:60.16:0,60,746	0/0:17,0:17:48.16:0,48,622	0/0:27,0:27:78.20:0,78,955	0/0:26,0:26:78.24:0,78,997	0/0:23,0:23:54.18:0,54,700	0/0:10,0:10:30.10:0,30,389	0/0:16,0:16:48.14:0,48,607	0/0:15,0:15:39.13:0,39,502	0/0:23,0:23:69.21:0,69,880	0/0:17,0:17:51.17:0,51,662	0/0:20,0:20:60.19:0,60,774	0/0:14,0:14:42.14:0,42,540	0/0:16,0:15:45.14:0,45,572	0/0:17,0:17:51.12:0,51,637	0/0:18,0:18:51.17:0,51,662	0/0:20,0:20:48.14:0,48,609	0/0:23,0:23:63.20:0,63,814	0/0:12,0:12:30.08:0,30,374	0/0:25,0:25:60.19:0,60,779	0/0:19,0:19:54.18:0,54,701	0/0:16,0:15:42.14:0,42,545	0/0:11,0:10:30.10:0,30,389
chr10	34801018	.	A	AT	9813.36	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=8.592;DP=431;FS=17.977;HRun=6;HaplotypeScore=166.7726;InbreedingCoeff=0.9749;MQ=48.18;MQ0=2;MQRankSum=-11.014;QD=29.21;ReadPosRankSum=0.898;VQSLOD=2.6335;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,6:10:15.05:185,15,0	1/1:0,11:11:32.89:390,33,0	0/0:20,0:16:36.04:0,36,366	0/0:21,0:20:51.09:0,51,520	1/1:5,32:37:77.06:851,77,0	1/1:3,14:17:39.11:474,39,0	1/1:1,8:9:24.03:284,24,0	1/1:6,6:11:24.06:275,24,0	1/1:6,7:13:24.07:291,24,0	1/1:4,20:24:66.20:820,66,0	1/1:0,19:19:50.99:570,51,0	0/0:14,0:14:39.08:0,39,397	1/1:3,12:15:39.11:477,39,0	1/1:3,12:15:33.11:415,33,0	1/1:0,11:11:33.11:415,33,0	1/1:1,12:13:30.10:377,30,0	1/1:0,6:6:15.05:187,15,0	1/1:2,5:7:9.03:113,9,0	1/1:0,10:10:30.10:377,30,0	1/1:2,28:30:78.08:909,78,0	1/1:2,6:8:18.02:209,18,0	1/1:2,17:19:48.15:603,48,0	0/0:28,0:28:78.17:0,78,796	0/0:12,0:12:27.05:0,27,275	1/1:3,11:14:30.05:357,30,0	1/1:2,8:10:27.08:328,27,0	1/1:0,15:14:42.13:528,42,0	1/1:1,10:11:30.10:377,30,0
chr10	34801035	.	C	CCAAGCATTT	37925.70	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=1.724;DP=448;FS=24.775;HRun=0;HaplotypeScore=121.0720;InbreedingCoeff=0.9721;MQ=50.64;MQ0=1;MQRankSum=-11.577;QD=109.93;ReadPosRankSum=1.203;VQSLOD=3.5191;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,5:11:12.04:605,12,0	1/1:5,8:13:39.13:1891,39,0	0/0:21,0:20:54.10:0,54,1460	0/0:18,0:17:48.03:0,48,1165	1/1:13,27:41:99:4497,114,0	1/1:1,11:18:35.99:1710,36,0	1/1:0,6:11:18.06:908,18,0	1/1:0,2:11:30.07:690,30,0	1/1:3,4:7:15.04:632,15,0	1/1:0,19:26:75.22:3226,75,0	1/1:0,14:17:48.08:2156,48,0	0/0:18,0:18:54.17:0,54,1623	1/1:6,5:11:33.11:1424,33,0	1/1:3,11:14:39.13:1836,39,0	1/1:0,11:19:33.11:1664,33,0	1/1:1,9:14:27.09:1362,27,0	1/1:6,3:9:27.08:840,27,0	1/1:4,2:6:12.03:468,12,0	1/1:4,1:5:15:591,15,0	1/1:8,24:32:90.26:4170,90,0	1/1:1,6:8:15.05:756,15,0	1/1:8,9:17:51.15:2021,51,0	0/0:33,0:33:93.28:0,93,2650	0/0:13,0:13:39.13:0,39,1186	1/1:0,11:12:33.11:1664,33,0	1/1:2,7:15:33.11:1487,33,0	1/1:7,9:17:51.15:2097,51,0	1/1:3,7:10:30.10:1230,30,0
chr10	34802410	.	G	GTTTT	4674.97	PASS	AB=1.000;AC=51;AF=0.911;AN=56;BaseQRankSum=-3.476;DP=331;FS=1.519;HRun=13;HaplotypeScore=56.2926;InbreedingCoeff=0.3611;MQ=69.91;MQ0=6;MQRankSum=-2.894;QD=14.75;ReadPosRankSum=0.157;VQSLOD=1.1382;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,1:24:20.95:254,21,0	1/1:3,0:2:3.01:30,3,0	0/1:18,0:11:4.99:5,0,49	0/0:14,0:9:11.08:0,11,146	1/1:15,0:15:18.01:226,18,0	1/1:3,7:11:6.02:123,6,0	1/1:5,3:9:7.27:104,7,0	1/1:10,0:8:8.95:73,9,0	1/1:7,0:6:12:161,12,0	1/1:6,1:15:23.18:350,23,0	1/1:6,1:17:26.80:320,27,0	1/1:6,0:6:8.90:61,9,0	1/1:2,0:7:3.01:57,3,0	1/1:6,0:6:15.04:187,15,0	1/1:15,0:15:29.94:267,30,0	1/1:9,0:8:9.03:138,9,0	0/1:4,0:3:0:0,0,0	0/1:2,0:1:0:0,0,0	1/1:6,2:18:36.01:476,36,0	1/1:8,1:26:26.93:313,27,0	1/1:3,0:6:3.01:37,3,0	1/1:7,0:7:3:27,3,0	1/1:5,4:12:11.95:179,12,0	1/1:1,1:2:3.01:67,3,0	1/1:4,0:18:12.04:205,12,0	1/1:9,14:27:54.04:703,54,0	1/1:8,1:7:6.02:113,6,0	1/1:0,8:8:9.03:199,9,0
chr10	34804622	.	GT	G	365.40	PASS	AC=22;AF=1.000;AN=22;BaseQRankSum=2.109;DP=321;FS=0.000;HRun=2;HaplotypeScore=38.8752;InbreedingCoeff=0.0827;MQ=9.30;MQ0=288;MQRankSum=1.076;QD=4.81;ReadPosRankSum=0.904;VQSLOD=0.4663;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	1/1:3,3:4:0.69:7,1,0	./.	./.	./.	./.	1/1:6,6:6:18.05:200,18,0	1/1:2,1:1:2.50:9,2,0	./.	./.	./.	./.	./.	1/1:15,1:1:2.68:11,3,0	./.	./.	1/1:0,3:3:7.95:32,8,0	./.	1/1:1,3:3:7.87:31,8,0	1/1:2,6:6:5.94:23,6,0	./.	1/1:0,4:4:9.61:35,10,0	1/1:6,1:1:3.01:34,3,0	1/1:8,1:1:2.04:6,2,0	1/1:1,3:3:7.75:47,8,0
chr10	34805036	.	T	TC	3335.22	PASS	AC=52;AF=1.000;AN=52;BaseQRankSum=1.336;DP=128;FS=0.000;HRun=0;HaplotypeScore=78.2558;InbreedingCoeff=-0.0629;MQ=27.48;MQ0=0;MQRankSum=0.907;QD=26.06;ReadPosRankSum=1.699;VQSLOD=4.5559;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,4:5:6.90:69,7,0	1/1:0,2:2:6.02:68,6,0	./.	./.	1/1:0,11:11:26.86:271,27,0	1/1:0,4:4:9.02:100,9,0	1/1:0,3:3:9.02:100,9,0	1/1:0,6:6:18.06:231,18,0	1/1:0,2:2:6.02:66,6,0	1/1:0,4:4:12.04:152,12,0	1/1:0,6:6:17.84:173,18,0	1/1:0,6:6:15.03:158,15,0	1/1:0,7:7:17.94:180,18,0	1/1:0,5:4:12.03:129,12,0	1/1:0,3:3:3.01:33,3,0	1/1:0,1:1:3.01:34,3,0	1/1:0,4:4:3.68:65,4,0	1/1:0,6:6:18.05:213,18,0	1/1:0,1:1:3.01:38,3,0	1/1:0,6:6:12.03:133,12,0	1/1:0,3:3:6.77:50,7,0	1/1:0,6:5:12.03:128,12,0	1/1:0,10:10:26.75:254,27,0	1/1:0,2:2:6.02:64,6,0	1/1:0,7:7:12.03:133,12,0	1/1:0,7:7:21.07:256,21,0	1/1:0,9:9:15.04:165,15,0	1/1:0,2:2:6.02:70,6,0
chr10	34805038	.	T	TC	3103.12	PASS	AC=52;AF=1.000;AN=52;BaseQRankSum=1.392;DP=152;FS=0.000;HRun=0;HaplotypeScore=93.2494;InbreedingCoeff=-0.0561;MQ=27.57;MQ0=0;MQRankSum=-0.247;QD=20.42;ReadPosRankSum=1.701;VQSLOD=5.5447;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,4:6:11.76:105,12,0	1/1:0,2:2:6.01:57,6,0	./.	./.	1/1:1,11:12:26.97:235,27,0	1/1:1,4:5:9:81,9,0	1/1:0,3:3:9.01:82,9,0	1/1:1,6:7:18.05:214,18,0	1/1:2,2:4:6:53,6,0	1/1:1,4:5:15.04:170,15,0	1/1:1,6:7:17.92:157,18,0	1/1:0,6:6:14.99:129,15,0	1/1:3,7:10:21.01:206,21,0	1/1:0,5:4:11.99:102,12,0	1/1:1,3:4:3:27,3,0	1/1:0,1:1:3:28,3,0	1/1:2,4:5:6.68:81,7,0	1/1:0,6:6:18.04:187,18,0	1/1:0,1:1:3.01:35,3,0	1/1:2,6:8:12:107,12,0	1/1:0,3:3:5.89:64,6,0	1/1:0,6:5:11.99:100,12,0	1/1:4,10:14:33.01:317,33,0	1/1:0,2:2:5.99:48,6,0	1/1:1,7:8:12.01:108,12,0	1/1:1,7:8:24.06:260,24,0	1/1:2,9:11:18.01:166,18,0	1/1:0,2:2:6.01:60,6,0
chr10	34805042	.	G	GT	4426.96	PASS	AC=52;AF=1.000;AN=52;BaseQRankSum=0.742;DP=165;FS=0.000;HRun=0;HaplotypeScore=92.4410;InbreedingCoeff=-0.0439;MQ=27.67;MQ0=0;MQRankSum=1.550;QD=26.83;ReadPosRankSum=1.706;VQSLOD=5.3319;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,6:6:15.04:170,15,0	1/1:0,2:2:6.02:68,6,0	./.	./.	1/1:1,12:13:30.08:326,30,0	1/1:0,5:5:12.03:133,12,0	1/1:0,3:3:9.02:100,9,0	1/1:1,7:8:18.06:230,18,0	1/1:2,4:6:17.93:177,18,0	1/1:1,5:6:15.05:190,15,0	1/1:3,6:9:21.02:223,21,0	1/1:1,6:7:18.03:188,18,0	1/1:0,10:10:27.08:308,27,0	1/1:0,5:4:12.03:130,12,0	1/1:0,4:4:6.02:68,6,0	1/1:1,1:2:3.01:34,3,0	1/1:0,6:5:6.69:102,7,0	1/1:0,6:6:18.05:215,18,0	1/1:0,1:1:3.01:38,3,0	1/1:1,8:9:20.99:223,21,0	1/1:0,3:3:9.03:105,9,0	1/1:0,6:5:15.04:161,15,0	1/1:2,14:16:39.10:429,39,0	1/1:0,2:2:6.01:63,6,0	1/1:0,8:8:15.04:167,15,0	1/1:1,8:9:27.04:311,27,0	1/1:0,11:11:18.05:200,18,0	1/1:0,2:2:6.02:70,6,0
chr10	34805052	.	C	CT	5741.23	PASS	AC=52;AF=1.000;AN=52;BaseQRankSum=0.119;DP=196;FS=0.000;HRun=2;HaplotypeScore=96.7351;InbreedingCoeff=-0.0346;MQ=31.42;MQ0=0;MQRankSum=0.830;QD=29.29;ReadPosRankSum=1.708;VQSLOD=4.4830;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,6:7:15.05:215,15,0	1/1:1,1:2:3.01:43,3,0	./.	./.	1/1:1,14:15:30.06:402,30,0	1/1:3,6:9:18.03:222,18,0	1/1:1,3:4:9.03:129,9,0	1/1:2,5:7:12.04:173,12,0	1/1:0,7:7:21.07:301,21,0	1/1:2,4:6:14.84:185,15,0	1/1:2,11:13:36.06:470,36,0	1/1:0,7:7:18.06:258,18,0	1/1:2,10:12:30.06:407,30,0	1/1:1,6:6:17.98:213,18,0	1/1:3,4:7:12.01:136,12,0	1/1:0,3:3:9.03:129,9,0	1/1:1,7:7:6.66:98,7,0	1/1:2,5:7:15.05:216,15,0	1/1:1,0:1:2.98:21,3,0	1/1:3,7:10:15.05:215,15,0	1/1:2,3:5:12.01:135,12,0	1/1:1,6:6:15.05:215,15,0	1/1:1,13:14:36.08:493,36,0	1/1:0,2:2:6.02:86,6,0	1/1:1,9:10:21.04:279,21,0	1/1:2,8:10:29.82:381,30,0	1/1:3,11:14:23.98:275,24,0	1/1:1,1:2:3.01:43,3,0
chr10	34805070	.	T	TC	9580.05	PASS	AC=52;AF=1.000;AN=52;BaseQRankSum=-1.732;DP=270;FS=0.000;HRun=1;HaplotypeScore=74.9583;InbreedingCoeff=-0.0129;MQ=40.95;MQ0=0;MQRankSum=1.337;QD=35.75;ReadPosRankSum=1.716;VQSLOD=5.0827;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,7:8:20.56:278,21,0	1/1:0,5:5:15.05:225,15,0	./.	./.	1/1:0,16:16:39.13:582,39,0	1/1:0,13:13:30.06:424,30,0	1/1:2,5:7:12.04:173,12,0	1/1:1,5:6:15.01:199,15,0	1/1:0,8:8:24.08:359,24,0	1/1:0,8:8:24.08:359,24,0	1/1:1,15:16:35.21:618,35,0	1/1:0,12:12:27.09:404,27,0	1/1:0,16:16:45.15:667,45,0	1/1:0,9:9:21.07:314,21,0	1/1:0,9:9:21.07:313,21,0	1/1:1,4:5:12.04:179,12,0	1/1:0,13:12:27.06:380,27,0	1/1:2,6:8:12.04:180,12,0	1/1:0,4:4:12.04:180,12,0	1/1:0,18:18:45.15:673,45,0	1/1:0,7:7:18.06:269,18,0	1/1:1,11:12:30.10:448,30,0	1/1:0,15:15:39.13:582,39,0	1/1:1,3:4:9.03:135,9,0	1/1:0,12:12:27.09:404,27,0	1/1:0,14:14:42.11:587,42,0	1/1:1,19:20:39.09:559,39,0	1/1:0,3:3:6.02:90,6,0
chr10	34805650	.	CT	C	2022.92	PASS	AB=0.814;AC=35;AF=0.625;AN=56;BaseQRankSum=-0.629;DP=364;FS=0.000;HRun=12;HaplotypeScore=52.9336;InbreedingCoeff=0.2846;MQ=64.95;MQ0=13;MQRankSum=1.293;QD=6.68;ReadPosRankSum=2.544;VQSLOD=1.5706;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:5:0,5,13	1/1:2,1:3:8.78:59,9,0	0/1:30,0:11:3.22:3,0,19	0/1:23,0:12:5.22:5,0,33	0/1:22,0:22:0.78:1,0,187	1/1:14,4:17:34.68:258,35,0	0/1:5,0:5:21.42:36,0,21	1/1:4,14:17:32.49:252,32,0	0/0:14,0:13:20.96:0,21,188	1/1:2,11:12:23.75:176,24,0	0/1:3,11:13:0.60:77,0,1	0/0:9,0:7:3.86:0,4,22	1/1:8,2:10:15.83:106,16,0	0/1:5,7:12:2.56:25,0,3	1/1:3,7:10:2.92:19,3,0	1/1:4,2:6:8.52:86,9,0	0/0:9,0:9:16.11:0,16,136	1/1:0,5:5:5.98:46,6,0	0/1:8,8:14:30.47:154,0,30	0/1:8,11:19:25.32:97,0,25	1/1:8,5:11:15.36:114,15,0	1/1:6,1:7:11.92:89,12,0	0/0:11,0:11:2.22:0,2,16	0/0:6,0:6:2.97:0,3,6	1/1:3,10:12:11.94:91,12,0	1/1:6,18:23:22.39:331,22,0	1/1:3,13:16:20.75:149,21,0	0/1:4,1:5:17.20:17,0,24
chr10	34807246	.	TA	T	8545.20	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=11.204;DP=572;FS=1.516;HRun=9;HaplotypeScore=59.3755;InbreedingCoeff=0.9897;MQ=85.57;MQ0=0;MQRankSum=-3.098;QD=23.41;ReadPosRankSum=2.103;VQSLOD=5.7985;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:39.07:0,39,418	0/0:15,0:15:42.12:0,42,485	0/0:17,0:18:36.34:0,36,372	0/0:19,0:19:29.90:0,30,354	0/0:46,0:46:99:0,132,1488	1/1:1,16:17:45.02:412,45,0	1/1:1,12:13:36.02:330,36,0	1/1:3,25:28:71.98:646,72,0	0/0:25,0:25:72.20:0,72,820	1/1:4,23:27:71.94:643,72,0	1/1:0,27:27:78.04:714,78,0	0/0:13,1:14:8.64:0,9,353	1/1:1,20:21:57.03:522,57,0	1/1:4,13:17:39.02:357,39,0	1/1:2,12:14:36.02:330,36,0	1/1:1,8:9:24.01:220,24,0	0/0:24,0:24:63.19:0,63,727	1/1:1,12:13:24.01:220,24,0	1/1:2,17:19:51.02:467,51,0	1/1:6,21:27:60.02:549,60,0	1/1:2,20:22:59.96:539,60,0	1/1:2,15:17:41.15:383,41,0	0/0:21,0:21:54.15:0,54,615	0/0:11,0:11:27.08:0,27,312	1/1:2,22:24:57.03:522,57,0	1/1:4,20:24:60.03:549,60,0	1/1:1,32:33:90.05:824,90,0	1/1:0,13:13:35.96:320,36,0
chr10	34808261	.	C	CAA	111.08	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-0.126;DP=573;FS=5.363;HRun=8;HaplotypeScore=69.1082;InbreedingCoeff=0.9579;MQ=68.55;MQ0=0;MQRankSum=-0.249;QD=18.51;ReadPosRankSum=1.342;VQSLOD=1.6135;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:37.57:0,38,384	1/1:1,4:6:14.54:199,15,0	0/0:18,0:18:26.94:0,27,284	0/0:15,0:13:23.34:0,23,219	0/0:35,0:35:84.13:0,84,979	0/0:32,0:32:87.20:0,87,957	0/0:9,0:9:21.03:0,21,223	0/0:23,0:23:60.13:0,60,652	0/0:20,0:20:54.14:0,54,601	0/0:29,0:29:78.20:0,78,869	0/0:19,0:19:48.05:0,48,512	0/0:18,0:18:45.10:0,45,501	0/0:18,0:18:48.11:0,48,524	0/0:16,0:16:45.10:0,45,492	0/0:14,0:14:39.10:0,39,433	0/0:23,0:23:63.14:0,63,692	0/0:18,0:19:46.64:0,47,538	0/0:12,0:12:33.09:0,33,367	0/0:26,0:25:63.13:0,63,688	0/0:39,0:39:99:0,108,1203	0/0:17,0:17:45.10:0,45,490	0/0:18,0:18:54.15:0,54,600	0/0:20,0:20:60.14:0,60,658	0/0:13,0:13:36.04:0,36,377	0/0:19,0:19:48.13:0,48,534	0/0:25,0:25:72.19:0,72,794	0/0:47,0:47:99:0,129,1436	0/0:7,0:7:14.81:0,15,167
chr10	34809957	.	G	GT	117.27	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-2.411;DP=318;FS=1.751;HRun=8;HaplotypeScore=54.1478;InbreedingCoeff=0.8680;MQ=74.95;MQ0=0;MQRankSum=-0.321;QD=16.75;ReadPosRankSum=0.773;VQSLOD=3.5145;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:42.02:0,42,384	1/1:0,7:7:18.05:208,18,0	0/0:6,0:5:11.96:0,12,102	0/0:9,0:9:11.94:0,12,100	0/0:14,0:14:38.99:0,39,348	0/0:9,0:9:20.96:0,21,181	0/0:6,0:6:18.01:0,18,165	0/0:31,0:31:75.03:0,75,683	0/0:16,0:16:36.01:0,36,330	0/0:8,0:8:18.01:0,18,165	0/0:7,0:7:18.01:0,18,165	0/0:7,0:7:18.01:0,18,165	0/0:6,0:6:18.01:0,18,165	0/0:8,0:8:18:0,18,165	0/0:12,0:12:36:0,36,324	0/0:7,0:7:18.01:0,18,165	0/0:15,0:15:42.02:0,42,384	0/0:10,0:10:30.02:0,30,274	0/0:16,0:16:27:0,27,247	0/0:17,0:17:42.01:0,42,384	0/0:12,0:12:33:0,33,297	0/0:7,0:7:21.01:0,21,192	0/0:7,0:7:18.01:0,18,165	0/0:10,0:10:30.02:0,30,275	0/0:12,0:12:24:0,24,220	0/0:14,0:14:39.02:0,39,357	0/0:14,0:14:36.02:0,36,329	0/0:13,0:13:35.99:0,36,324
chr10	34810124	.	TATAATATAATATA	T	2410.85	PASS	AB=1.000;AC=27;AF=0.643;AN=42;BaseQRankSum=-2.783;DP=163;FS=12.093;HRun=0;HaplotypeScore=58.8219;InbreedingCoeff=0.3513;MQ=63.41;MQ0=15;MQRankSum=1.403;QD=24.11;ReadPosRankSum=-2.566;VQSLOD=0.2481;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:3,9:12:15.05:536,15,0	1/1:3,0:3:3.01:64,3,0	./.	0/0:30,0:8:10:0,10,66	1/1:3,0:2:6.02:93,6,0	0/0:3,0:3:2.49:0,2,6	./.	0/1:40,0:38:8.81:603,0,9	./.	1/1:2,7:9:21.07:381,21,0	1/1:2,0:2:3.01:92,3,0	1/1:1,0:1:3.01:32,3,0	1/1:2,0:2:3.01:47,3,0	1/1:2,0:2:3.01:47,3,0	0/0:3,0:3:1.55:0,2,4	./.	0/0:7,0:7:1.25:0,1,3	1/1:7,0:6:3.94:90,4,0	1/1:12,0:9:20.73:327,21,0	1/1:1,0:1:3.01:47,3,0	./.	1/1:1,0:1:3.01:47,3,0	./.	./.	0/0:5,0:5:1.25:0,1,3	1/1:5,0:5:7.43:126,7,0	0/0:4,0:4:1:0,1,21	0/0:2,0:2:2.80:0,3,13
chr10	34810129	.	TATAATATA	T	3452.92	PASS	AC=42;AF=0.955;AN=44;BaseQRankSum=-3.497;DP=160;FS=14.580;HRun=0;HaplotypeScore=43.1773;InbreedingCoeff=0.2056;MQ=60.21;MQ0=14;MQRankSum=-2.710;QD=27.19;ReadPosRankSum=1.716;VQSLOD=1.4475;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:11:15.05:289,15,0	1/1:2,0:2:2.80:13,3,0	./.	0/0:28,0:6:15.63:0,16,145	1/1:4,0:3:9.03:129,9,0	1/1:0,3:3:6.02:160,6,0	./.	1/1:34,0:32:51.90:756,52,0	./.	1/1:9,0:9:21.07:328,21,0	1/1:2,0:2:3.01:45,3,0	1/1:1,0:1:3.01:32,3,0	1/1:2,0:2:3.01:47,3,0	1/1:3,0:3:6.02:93,6,0	1/1:0,3:3:3.01:78,3,0	./.	1/1:1,6:7:3.01:80,3,0	1/1:8,0:7:12.04:220,12,0	1/1:14,0:11:26.85:415,27,0	1/1:3,0:3:9.03:134,9,0	1/1:1,0:1:3.01:47,3,0	1/1:2,0:2:6.02:93,6,0	./.	./.	1/1:1,5:6:3.01:80,3,0	1/1:0,7:7:18.06:300,18,0	1/1:3,0:3:3.01:47,3,0	1/1:2,0:2:3.01:68,3,0
chr10	34810134	.	TATA	T	3018.18	PASS	AC=44;AF=0.957;AN=46;BaseQRankSum=-3.552;DP=165;FS=14.176;HRun=0;HaplotypeScore=30.1506;InbreedingCoeff=0.1868;MQ=60.24;MQ0=14;MQRankSum=-2.718;QD=22.87;ReadPosRankSum=1.259;VQSLOD=1.3631;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,0:10:15.01:149,15,0	1/1:3,0:3:5.23:47,5,0	./.	0/0:28,0:6:15.63:0,16,145	1/1:0,5:4:9.03:129,9,0	1/1:3,0:3:6:55,6,0	./.	1/1:15,19:32:59.17:842,59,0	1/1:1,0:1:3.01:46,3,0	1/1:9,0:9:21.06:293,21,0	1/1:3,0:3:3.01:46,3,0	1/1:0,1:1:3.01:32,3,0	1/1:0,1:1:3.01:47,3,0	1/1:1,3:4:6.02:93,6,0	1/1:3,0:3:3.01:43,3,0	./.	1/1:7,0:7:3:27,3,0	1/1:3,4:6:12.04:173,12,0	1/1:4,11:12:29.98:453,30,0	1/1:0,3:3:9.03:134,9,0	1/1:0,2:2:3.01:47,3,0	1/1:0,3:3:6.02:93,6,0	./.	./.	1/1:5,0:5:3:27,3,0	1/1:7,0:7:18.05:248,18,0	1/1:2,2:4:3.01:47,3,0	1/1:2,0:2:3.01:47,3,0
chr10	34810137	.	A	AAT	2765.19	PASS	AB=1.000;AC=39;AF=0.813;AN=48;BaseQRankSum=-5.963;DP=157;FS=7.200;HRun=0;HaplotypeScore=28.7855;InbreedingCoeff=0.3243;MQ=64.29;MQ0=14;MQRankSum=1.566;QD=24.26;ReadPosRankSum=-3.286;VQSLOD=2.2920;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:10,0:10:23.84:34,0,24	1/1:3,0:3:5.23:47,5,0	./.	0/0:24,0:6:15.26:0,15,129	1/1:5,0:4:9.03:129,9,0	0/0:3,0:3:4.59:0,5,15	./.	1/1:31,0:29:58.61:867,59,0	1/1:1,0:1:3.01:46,3,0	1/1:9,0:9:13.59:265,14,0	1/1:0,2:2:3.01:43,3,0	1/1:1,0:1:3.01:32,3,0	1/1:1,0:1:3.01:47,3,0	1/1:3,0:3:6.02:93,6,0	1/1:3,0:3:3.01:43,3,0	./.	0/0:7,0:7:2.37:0,2,8	1/1:7,0:6:12.04:182,12,0	1/1:15,0:12:13.56:433,14,0	1/1:4,0:4:9.03:134,9,0	1/1:2,0:2:3.01:47,3,0	1/1:3,0:3:6.02:93,6,0	./.	1/1:2,0:2:2.83:25,3,0	0/0:5,0:5:2.37:0,2,8	1/1:7,0:7:18.04:242,18,0	1/1:3,0:3:3.01:47,3,0	1/1:0,2:2:3.01:43,3,0
chr10	34814810	.	TCCCATACCCCCTCC	T	2991.49	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=8.184;DP=555;FS=8.674;HRun=0;HaplotypeScore=199.3936;InbreedingCoeff=0.8195;MQ=54.99;MQ0=19;MQRankSum=-7.817;QD=50.70;ReadPosRankSum=3.178;VQSLOD=2.2347;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,108,6615	0/0:9,0:9:27.09:0,27,1827	0/0:22,0:9:26.68:0,27,1213	0/0:14,0:7:21.07:0,21,1302	0/0:22,0:22:60.21:0,60,3798	0/0:15,0:14:42.14:0,42,2660	0/0:18,0:17:48.13:0,48,2473	0/0:27,0:21:54.15:0,54,2748	0/0:18,0:18:45.15:0,45,2965	0/0:17,0:17:51.18:0,51,3087	0/0:26,0:26:75.26:0,75,4988	1/1:7,15:20:36.12:1518,36,0	0/0:22,0:22:60.21:0,60,3690	0/0:17,0:17:51.18:0,51,3432	0/0:24,0:24:72.25:0,72,4733	0/0:14,0:14:42.14:0,42,2847	0/0:25,0:24:69.24:0,69,4354	0/0:23,0:23:69.24:0,69,4485	0/0:17,0:14:42.10:0,42,2476	0/0:17,0:15:39.13:0,39,2673	0/0:19,0:19:54.14:0,54,3479	0/0:15,0:14:42.13:0,42,2663	1/1:3,17:20:33.58:1352,34,0	1/1:5,8:13:6.02:253,6,0	0/0:25,0:24:69.24:0,69,4778	0/0:22,0:22:63.21:0,63,3922	0/0:31,0:30:90.29:0,90,5689	0/1:4,0:4:7.39:7,0,446
chr10	34815431	.	AT	A	10915.56	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-0.196;DP=635;FS=9.119;HRun=7;HaplotypeScore=68.3464;InbreedingCoeff=0.9923;MQ=63.09;MQ0=2;MQRankSum=0.655;QD=26.18;ReadPosRankSum=-0.066;VQSLOD=5.1598;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:38:99:0,111,1347	0/0:11,0:11:24.08:0,24,302	0/0:15,0:12:24.08:0,24,302	0/0:12,0:4:11.97:0,12,128	0/0:2,0:32:76.93:0,77,397	1/1:0,16:16:45.10:459,45,0	1/1:1,21:22:57.13:582,57,0	1/1:3,19:19:48.09:483,48,0	0/0:1,0:15:39.73:0,40,202	1/1:4,21:25:63.14:641,63,0	1/1:4,22:26:63.13:642,63,0	0/0:21,0:21:57.18:0,57,717	1/1:1,17:18:48.11:490,48,0	1/1:2,17:19:48.11:489,48,0	1/1:2,16:18:45.10:459,45,0	1/1:2,18:20:54.12:551,54,0	0/0:1,0:43:99:0,108,551	1/1:3,16:19:45.10:459,45,0	1/1:5,26:31:78.18:796,78,0	1/1:1,33:34:96.21:979,96,0	1/1:4,26:30:66.15:673,66,0	1/1:1,33:34:93.21:949,93,0	0/0:15,0:15:45.14:0,45,566	0/0:15,0:15:42.13:0,42,528	1/1:2,21:23:57.13:581,57,0	1/1:1,26:27:78.17:795,78,0	1/1:2,26:28:71.74:734,72,0	1/1:0,5:5:15.03:153,15,0
chr10	34817237	.	T	TCA	24478.75	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-11.177;DP=714;FS=7.129;HRun=0;HaplotypeScore=81.2338;InbreedingCoeff=0.9724;MQ=79.59;MQ0=1;MQRankSum=-4.712;QD=41.35;ReadPosRankSum=1.969;VQSLOD=6.7843;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,36:38:75.26:1314,75,0	1/1:1,11:12:33.11:578,33,0	0/0:17,0:17:38.80:0,39,503	0/0:20,0:20:42.05:0,42,530	1/1:3,32:35:78.27:1367,78,0	1/1:3,23:26:57.20:999,57,0	1/1:1,18:19:44.95:789,45,0	1/1:8,30:38:90.31:1558,90,0	1/1:1,22:24:57.20:998,57,0	1/1:3,34:38:99:1727,102,0	1/1:2,17:19:48.16:841,48,0	0/0:22,0:22:54.16:0,54,713	1/1:2,24:26:66.23:1145,66,0	1/1:4,17:21:45.15:788,45,0	1/1:4,28:32:75.26:1315,75,0	1/1:2,24:26:60.21:1052,60,0	1/1:3,25:28:60.21:1052,60,0	1/1:1,5:6:15.05:263,15,0	1/1:3,25:28:81.21:1256,81,0	1/1:3,34:37:81.28:1419,81,0	1/1:3,30:33:84.29:1472,84,0	1/1:2,18:20:51.17:891,51,0	0/0:34,0:34:96.32:0,96,1298	0/0:29,0:29:81.27:0,81,1091	1/1:4,16:20:48.16:819,48,0	1/1:1,29:29:84.27:1420,84,0	1/1:2,26:29:75.26:1312,75,0	1/1:3,2:5:6.02:105,6,0
chr10	34817618	.	GTCTA	G	1460.58	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-5.102;DP=763;FS=0.000;HRun=0;HaplotypeScore=278.7468;InbreedingCoeff=0.8190;MQ=53.14;MQ0=4;MQRankSum=5.945;QD=22.82;ReadPosRankSum=2.919;VQSLOD=3.0198;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:16.62:0,17,135	0/0:6,0:6:6.02:0,6,82	0/0:27,0:18:9.43:0,9,488	0/0:26,0:19:30.07:0,30,596	0/0:45,0:45:12.05:0,12,123	0/0:28,0:28:25.78:0,26,237	0/0:17,0:15:3.91:0,4,22	0/0:45,0:40:51.33:0,51,530	0/0:22,0:22:18.46:0,18,213	0/0:35,0:35:73.13:0,73,1053	0/0:25,0:25:15:0,15,176	1/1:6,20:26:42.14:685,42,0	0/0:29,0:29:24.49:0,24,321	0/0:32,0:32:9.01:0,9,125	0/0:34,0:34:27.56:0,28,317	0/0:31,0:31:23.85:0,24,236	0/0:7,0:27:5.91:0,6,38	0/0:12,0:12:18.71:0,19,152	0/0:19,0:19:25.06:0,25,290	0/0:34,0:34:26.48:0,26,265	0/0:27,0:27:24.42:0,24,240	0/0:28,0:28:15.36:0,15,127	1/1:6,21:27:35.99:574,36,0	1/1:1,10:11:21.07:343,21,0	0/0:33,0:33:17.44:0,17,219	0/0:33,0:33:67.36:0,67,817	0/0:38,0:38:34.35:0,34,400	0/0:16,0:16:24.26:0,24,317
chr10	34820508	.	C	CATCTATCT	9152.45	PASS	AB=1.000;AC=42;AF=0.840;AN=50;BaseQRankSum=-2.617;DP=758;FS=6.285;HRun=0;HaplotypeScore=270.8869;InbreedingCoeff=0.5513;MQ=64.03;MQ0=5;MQRankSum=-1.851;QD=14.23;ReadPosRankSum=0.882;VQSLOD=2.8206;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:29:17.85:150,0,18	1/1:11,0:11:12.04:367,12,0	./.	./.	1/1:41,5:46:8.99:114,9,0	1/1:37,0:39:24.05:648,24,0	1/1:21,0:20:2.93:24,3,0	0/1:41,0:39:0:0,0,0	1/1:19,3:22:9.03:362,9,0	1/1:37,0:37:27.09:776,27,0	1/1:33,0:33:3:50,3,0	0/0:12,0:19:9.03:0,9,164	1/1:27,0:27:9.03:271,9,0	1/1:31,0:31:20.99:441,21,0	1/1:30,0:30:24.08:605,24,0	1/1:35,0:35:27.08:660,27,0	1/1:17,1:18:9.03:334,9,0	1/1:10,0:10:6:105,6,0	1/1:22,2:23:15.05:556,15,0	1/1:36,4:41:33.43:843,33,0	./.	1/1:32,0:32:14.79:355,15,0	0/0:13,0:24:4.37:0,4,56	0/0:11,0:16:21.07:0,21,376	1/1:25,0:25:14.95:378,15,0	1/1:38,0:38:36.11:1008,36,0	1/1:37,4:41:33.09:978,33,0	1/1:12,0:12:6.02:129,6,0
chr10	34820515	.	CT	C	255.60	PASS	AB=0.614;AC=1;AF=0.018;AN=56;BaseQRankSum=1.651;DP=720;FS=1.293;HRun=1;HaplotypeScore=186.9726;InbreedingCoeff=-0.0201;MQ=58.21;MQ0=9;MQRankSum=-0.428;QD=9.47;ReadPosRankSum=1.697;VQSLOD=1.5535;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:10,17:27:99:330,0,154	0/0:9,0:9:9.91:0,10,128	0/0:15,0:13:39.13:0,39,550	0/0:16,0:14:42.14:0,42,606	0/0:43,0:43:82.82:0,83,1203	0/0:37,0:37:89.74:0,90,1248	0/0:18,0:17:33.91:0,34,510	0/0:49,0:41:99:0,120,1602	0/0:21,0:21:51.05:0,51,731	0/0:31,0:31:92.31:0,92,1363	0/0:31,0:31:64.76:0,65,966	0/0:16,0:16:28.75:0,29,380	0/0:26,0:26:45.04:0,45,681	0/0:31,0:31:57.19:0,57,869	0/0:29,0:29:45.12:0,45,670	0/0:34,0:34:78.26:0,78,1200	0/0:18,0:18:24.08:0,24,354	0/0:10,0:10:26.59:0,27,397	0/0:27,0:26:74.21:0,74,997	0/0:40,0:40:93.29:0,93,1329	0/0:19,0:19:32.72:0,33,481	0/0:26,0:26:36.59:0,37,542	0/0:20,0:20:28.49:0,28,383	0/0:16,0:16:32.75:0,33,391	0/0:20,0:20:29.85:0,30,448	0/0:36,0:36:99:0,108,1606	0/0:40,0:40:99:0,108,1583	0/0:15,0:15:45.09:0,45,594
chr10	34820577	.	TC	T	17596.32	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=8.190;DP=707;FS=7.773;HRun=2;HaplotypeScore=133.0304;InbreedingCoeff=0.9992;MQ=55.10;MQ0=2;MQRankSum=-0.026;QD=30.76;ReadPosRankSum=2.919;VQSLOD=3.8901;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,26:26:51.06:662,51,0	1/1:2,12:14:24.93:299,25,0	0/0:32,0:28:75.22:0,75,1095	0/0:30,0:27:75.25:0,75,1089	1/1:1,28:29:51.12:662,51,0	1/1:4,25:29:39.34:827,39,0	1/1:0,12:12:27.09:351,27,0	1/1:0,30:30:90.29:1169,90,0	1/1:0,20:20:45.03:584,45,0	1/1:2,30:32:90.29:1168,90,0	1/1:0,20:20:51.15:662,51,0	0/0:24,0:24:69.23:0,69,1034	1/1:0,33:33:87.28:1129,87,0	1/1:2,22:24:50.64:660,51,0	1/1:3,25:28:56.50:739,56,0	1/1:2,27:29:57.10:740,57,0	1/1:1,17:18:41.97:545,42,0	1/1:1,10:11:30.57:391,31,0	1/1:1,22:23:68.93:831,69,0	1/1:1,33:34:81.13:1042,81,0	1/1:2,30:32:81.26:1052,81,0	1/1:1,19:20:41.42:539,41,0	0/0:23,0:23:39.12:0,39,564	0/0:24,0:24:69.19:0,69,1008	1/1:2,18:20:44.81:584,45,0	1/1:1,34:35:99:1285,99,0	1/1:1,39:40:93.30:1208,93,0	1/1:1,12:13:36.12:468,36,0
chr10	34820599	.	A	ATCTG	784.83	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=0.976;DP=748;FS=5.394;HRun=0;HaplotypeScore=196.1083;InbreedingCoeff=0.9580;MQ=55.98;MQ0=12;MQRankSum=-1.202;QD=52.32;ReadPosRankSum=0.156;VQSLOD=4.0639;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:48.02:0,48,672	1/1:7,8:15:39.13:880,39,0	0/0:30,0:13:15.02:0,15,181	0/0:27,0:19:13.55:0,14,137	0/0:27,0:27:60.04:0,60,788	0/0:29,0:29:78.27:0,78,1275	0/0:12,0:12:21.04:0,21,288	0/0:31,0:30:54.11:0,54,781	0/0:23,0:23:60.16:0,60,907	0/0:33,0:33:78.25:0,78,1229	0/0:27,0:27:72.19:0,72,1052	0/0:28,0:28:72.18:0,72,1057	0/0:31,0:31:75.23:0,75,1191	0/0:24,0:24:48.14:0,48,725	0/0:27,0:27:60.02:0,60,885	0/0:33,0:33:69.21:0,69,1055	0/0:24,0:24:48.12:0,48,752	0/0:17,0:17:24.86:0,25,537	0/0:26,0:24:54.04:0,54,683	0/0:33,0:32:66.13:0,66,898	0/0:41,0:41:96.26:0,96,1493	0/0:19,0:19:45.12:0,45,681	0/0:21,0:21:51.16:0,51,791	0/0:31,0:31:78.03:0,78,1151	0/0:23,0:23:54.13:0,54,776	0/0:30,0:30:75.08:0,75,1084	0/0:39,0:39:72.06:0,72,1062	0/0:15,0:13:36.37:0,36,379
chr10	34821343	.	G	GATC	22296.04	PASS	AB=0.958;AC=47;AF=0.839;AN=56;BaseQRankSum=16.196;DP=489;FS=0.000;HRun=0;HaplotypeScore=218.8309;InbreedingCoeff=0.8394;MQ=59.18;MQ0=0;MQRankSum=-15.102;QD=59.30;ReadPosRankSum=3.913;VQSLOD=4.6816;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,16:22:60.18:1214,60,0	1/1:0,2:3:9.03:175,9,0	0/0:31,0:29:77.83:0,78,1326	0/0:27,0:26:72.25:0,72,1279	1/1:1,15:17:51.16:1113,51,0	1/1:2,9:11:30.09:655,30,0	1/1:0,21:25:75.24:1592,75,0	1/1:2,7:15:45.11:750,45,0	1/1:1,17:18:54.19:1261,54,0	1/1:2,19:24:72.22:1492,72,0	1/1:2,22:25:72.22:1549,72,0	0/1:22,1:23:4.84:5,0,1046	1/1:2,14:18:54.18:1175,54,0	1/1:1,20:21:63.22:1465,63,0	1/1:1,16:17:51.16:1149,51,0	1/1:2,18:23:69.20:1439,69,0	1/1:0,5:5:15.05:351,15,0	1/1:0,6:7:21.03:410,21,0	1/1:0,5:5:15.05:353,15,0	1/1:0,12:16:48.16:998,48,0	1/1:0,5:5:15.05:347,15,0	1/1:0,17:17:51.18:1193,51,0	0/0:25,0:25:75.24:0,75,1365	0/0:30,0:30:90.27:0,90,1613	1/1:2,19:25:75.24:1560,75,0	1/1:1,15:18:54.17:1142,54,0	1/1:1,11:13:39.12:837,39,0	1/1:0,1:1:3.01:71,3,0
chr10	34821346	.	ACCTGTTGAT	A	2373.87	PASS	AB=0.876;AC=15;AF=0.268;AN=56;BaseQRankSum=-3.867;DP=480;FS=0.000;HRun=0;HaplotypeScore=333.7888;InbreedingCoeff=-0.3791;MQ=58.86;MQ0=0;MQRankSum=-6.703;QD=9.69;ReadPosRankSum=-7.111;VQSLOD=0.1936;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:17,3:20:99:210,0,896	0/1:2,1:3:68.01:68,0,156	0/0:31,0:28:78.25:0,78,3216	0/0:30,0:29:84.27:0,84,3430	0/1:15,1:16:99:123,0,968	0/0:11,0:11:30.10:0,30,776	0/1:21,4:25:99:304,0,1313	0/1:7,6:13:99:439,0,393	0/0:19,0:19:27.88:0,28,1331	0/1:19,4:23:99:259,0,1428	0/1:23,1:24:44.99:45,0,1347	0/0:22,0:22:66.23:0,66,2993	0/1:15,2:17:99:129,0,989	0/0:20,0:21:55.02:0,55,1550	0/0:16,0:16:39.98:0,40,1152	0/1:18,3:21:99:166,0,1250	0/0:5,0:5:15.03:0,15,350	0/1:7,0:7:42.94:43,0,385	0/0:5,0:5:15.05:0,15,405	0/1:12,4:16:99:310,0,677	0/1:5,0:5:24.70:25,0,222	0/0:17,0:17:51.18:0,51,1348	0/0:26,0:26:78.27:0,78,3604	0/0:30,0:30:90.31:0,90,4557	0/1:21,4:25:99:262,0,1408	0/1:15,2:17:99:105,0,1102	0/1:11,1:12:41.95:42,0,810	0/0:1,0:1:3.01:0,3,82
chr10	34821349	.	T	TAA	12516.81	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=14.125;DP=497;FS=2.169;HRun=0;HaplotypeScore=246.9966;InbreedingCoeff=0.9310;MQ=57.69;MQ0=2;MQRankSum=-14.962;QD=35.46;ReadPosRankSum=6.439;VQSLOD=4.7604;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,16:22:49.46:622,49,0	1/1:1,3:3:8.94:100,9,0	0/0:32,0:29:80.04:0,80,1224	0/0:29,0:28:78.26:0,78,1213	1/1:2,15:17:46.39:604,46,0	1/1:1,10:10:30.09:400,30,0	1/1:5,21:26:63.41:869,63,0	1/1:7,7:14:15.16:306,15,0	1/1:2,17:19:54.18:744,54,0	1/1:6,19:24:51.41:803,51,0	1/1:3,22:25:72.16:943,72,0	0/0:22,1:23:24.37:0,24,936	1/1:2,14:16:48.03:613,48,0	1/1:2,21:22:66.21:883,66,0	1/1:2,16:18:48.16:661,48,0	1/1:3,18:21:58.63:793,59,0	1/1:0,5:5:15.05:205,15,0	1/1:1,6:7:16.87:219,17,0	1/1:0,5:5:15.05:217,15,0	1/1:5,12:17:47.46:590,47,0	1/1:0,5:5:15.05:206,15,0	1/1:0,17:17:51.17:693,51,0	0/0:28,0:28:81.25:0,81,1290	0/0:32,0:32:93.27:0,93,1488	1/1:5,19:24:69.36:886,69,0	1/1:3,15:18:42.56:635,43,0	1/1:2,11:13:36.09:482,36,0	1/1:0,1:1:3.01:42,3,0
chr10	34821350	.	G	GA	11179.97	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=11.802;DP=597;FS=1.078;HRun=0;HaplotypeScore=298.9450;InbreedingCoeff=0.9539;MQ=53.14;MQ0=2;MQRankSum=-13.318;QD=24.63;ReadPosRankSum=3.687;VQSLOD=3.8103;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:15,16:31:47.84:549,48,0	1/1:3,3:5:7.38:109,7,0	0/0:31,0:28:78.11:0,78,1008	0/0:30,0:28:75.15:0,75,963	1/1:6,15:21:43.24:420,43,0	1/1:6,10:15:42.06:404,42,0	1/1:11,21:32:62.11:720,62,0	1/1:19,7:26:29.55:537,30,0	1/1:7,17:24:72.08:703,72,0	1/1:11,20:30:55.96:721,56,0	1/1:4,22:26:67.14:696,67,0	0/0:21,1:22:34.36:0,34,787	1/1:3,14:17:40.56:416,41,0	1/1:4,22:25:74.98:709,75,0	1/1:7,16:23:69.10:691,69,0	1/1:4,18:22:50.13:541,50,0	1/1:1,5:6:17.99:162,18,0	1/1:4,6:10:26.27:252,26,0	1/1:7,5:12:36.07:368,36,0	1/1:13,12:25:51.71:623,52,0	1/1:2,5:7:18.02:168,18,0	1/1:4,17:21:60.06:565,60,0	0/0:27,0:27:81.23:0,81,1081	0/0:33,0:33:96.30:0,96,1321	1/1:10,19:29:52.72:668,53,0	1/1:6,15:21:47.76:557,48,0	1/1:9,11:20:52.50:542,53,0	1/1:1,1:2:6.01:61,6,0
chr10	34822453	.	C	CAA	1540.06	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-8.244;DP=731;FS=3.353;HRun=3;HaplotypeScore=147.6574;InbreedingCoeff=0.8046;MQ=56.65;MQ0=8;MQRankSum=1.636;QD=45.30;ReadPosRankSum=0.523;VQSLOD=3.0740;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,33:34:93.23:1635,93,0	0/0:7,0:7:18.06:0,18,252	0/0:18,0:3:9.03:0,9,121	0/0:23,0:2:5.51:0,6,51	0/0:28,0:28:78.23:0,78,1053	0/0:20,0:20:60.20:0,60,837	0/0:28,0:28:69.20:0,69,927	0/0:31,0:24:69.18:0,69,921	0/0:26,0:26:78.26:0,78,1090	0/0:29,0:28:81.26:0,81,1118	0/0:20,0:20:57.16:0,57,762	0/0:21,0:21:60.17:0,60,818	0/0:28,0:28:78.23:0,78,1052	0/0:33,0:33:90.28:0,90,1230	0/0:25,0:25:72.23:0,72,988	0/0:27,0:27:75.25:0,75,1048	0/0:27,0:27:78.19:0,78,1034	0/0:28,0:28:81.27:0,81,1124	0/0:13,0:10:30.10:0,30,416	0/0:37,0:37:99:0,105,1352	0/0:46,0:46:99:0,129,1784	0/0:29,0:29:84.25:0,84,1134	0/0:24,0:24:69.23:0,69,959	0/0:13,0:13:33.07:0,33,426	0/0:37,0:37:99:0,111,1549	0/0:33,0:33:90.30:0,90,1255	0/0:41,0:41:99:0,108,1473	0/0:5,0:5:9:0,9,106
chr10	34822459	.	CA	C	19246.14	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=8.943;DP=733;FS=8.583;HRun=1;HaplotypeScore=70.2350;InbreedingCoeff=0.9598;MQ=56.65;MQ0=10;MQRankSum=1.513;QD=38.49;ReadPosRankSum=2.127;VQSLOD=5.3149;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,102,1619	0/0:9,0:9:27.09:0,27,429	0/0:22,0:3:9.02:0,9,121	0/0:23,0:2:5.99:0,6,69	0/0:31,0:31:90.28:0,90,1392	1/1:0,20:20:60.20:839,60,0	1/1:0,28:28:72.24:1007,72,0	1/1:2,30:23:69.22:947,69,0	0/0:29,0:29:87.28:0,87,1362	1/1:0,29:28:84.27:1159,84,0	1/1:1,19:20:57.19:797,57,0	0/0:20,0:20:60.19:0,60,936	1/1:0,27:27:78.26:1091,78,0	1/1:0,30:30:90.30:1258,90,0	1/1:0,25:25:66.22:923,66,0	1/1:0,27:27:75.25:1049,75,0	0/0:24,0:24:72.25:0,72,1150	1/1:0,29:29:81.23:1110,81,0	1/1:1,12:11:33.09:442,33,0	1/1:0,33:33:96.32:1342,96,0	1/1:0,48:48:99:1846,132,0	1/1:0,28:28:81.27:1131,81,0	0/0:25,0:25:69.24:0,69,1103	0/0:12,0:12:30.09:0,30,457	1/1:0,37:37:99:1511,108,0	1/1:0,30:30:90.28:1240,90,0	1/1:0,41:41:99:1469,105,0	1/1:0,3:3:6.02:84,6,0
chr10	34822670	.	C	CA	11491.16	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-11.237;DP=707;FS=1.400;HRun=8;HaplotypeScore=68.8387;InbreedingCoeff=0.9971;MQ=57.54;MQ0=11;MQRankSum=1.165;QD=26.42;ReadPosRankSum=2.167;VQSLOD=5.6970;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:72.04:0,72,659	0/0:9,0:9:24.01:0,24,220	0/0:30,0:11:30.01:0,30,271	0/0:27,0:8:18.01:0,18,164	0/0:34,0:34:93:0,93,836	1/1:6,32:39:85.33:953,85,0	1/1:2,16:18:45.09:504,45,0	1/1:11,19:25:48.13:544,48,0	0/0:25,0:25:72.01:0,72,653	1/1:8,25:31:69.18:782,69,0	1/1:3,25:28:75.18:851,75,0	0/0:22,0:22:66.04:0,66,604	1/1:2,15:18:42.12:484,42,0	1/1:7,16:23:61.36:652,61,0	1/1:2,20:21:45.13:519,45,0	1/1:4,18:22:55.05:625,55,0	0/0:34,0:34:93.03:0,93,845	1/1:3,22:24:59.66:665,60,0	1/1:5,10:11:30.07:335,30,0	1/1:3,27:30:75.19:852,75,0	1/1:4,21:25:35.72:665,36,0	1/1:2,24:25:63.19:727,63,0	0/0:30,0:30:78.03:0,78,714	0/0:34,1:35:49.39:0,49,700	1/1:1,21:23:57:638,57,0	1/1:3,21:22:60.18:692,60,0	1/1:2,25:27:69.21:796,69,0	1/1:1,6:7:18.05:208,18,0
chr10	34823319	.	A	AGGGGGAACACCCTT	68912.82	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-4.240;DP=593;FS=0.000;HRun=0;HaplotypeScore=199.2662;InbreedingCoeff=0.9932;MQ=59.57;MQ0=0;MQRankSum=-14.872;QD=148.52;ReadPosRankSum=2.134;VQSLOD=5.1230;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:96.26:0,96,3666	1/1:4,8:12:30.10:2035,30,0	0/0:27,0:26:69.11:0,69,2389	0/0:19,0:19:48.12:0,48,1651	1/1:12,16:33:80.80:3661,81,0	1/1:10,11:22:32.11:3855,32,0	1/1:12,7:20:54.19:3464,54,0	1/1:21,3:21:60.21:2682,60,0	1/1:7,7:18:48.16:3014,48,0	1/1:15,12:32:81.26:4592,81,0	1/1:8,10:20:54.04:2941,54,0	0/0:18,0:18:54.19:0,54,2176	1/1:7,10:19:54.19:3431,54,0	1/1:5,9:20:48.16:2989,48,0	1/1:10,8:22:53.73:3390,54,0	1/1:6,9:18:45.15:2979,45,0	1/1:14,10:27:54.19:3740,54,0	1/1:6,4:13:24.08:1705,24,0	1/1:10,3:17:51.17:2515,51,0	1/1:11,10:22:57.15:3234,57,0	1/1:8,8:16:37.56:2145,38,0	1/1:11,11:25:66.23:3741,66,0	0/0:15,0:15:45.15:0,45,1819	0/0:17,0:17:51.18:0,51,2093	1/1:13,10:29:63.22:3908,63,0	1/1:10,14:24:69.24:4280,69,0	1/1:8,12:24:60.16:3841,60,0	1/1:3,1:4:12.04:771,12,0
chr10	34823899	.	GTCTATCTA	G	2532.14	PASS	AB=0.795;AC=30;AF=0.625;AN=48;BaseQRankSum=0.442;DP=640;FS=1.049;HRun=0;HaplotypeScore=200.3516;InbreedingCoeff=0.3671;MQ=63.07;MQ0=8;MQRankSum=-4.678;QD=6.41;ReadPosRankSum=0.428;VQSLOD=2.6387;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:21:2.85:0,3,55	0/0:10,0:12:2.99:0,3,24	./.	./.	0/1:16,0:23:0:0,0,0	1/1:21,5:26:2.95:73,3,0	1/1:8,4:12:3.01:73,3,0	0/0:53,0:52:0.89:0,1,2	1/1:14,0:31:18.05:296,18,0	1/1:19,0:30:15.94:281,16,0	1/1:6,0:11:0.84:2,1,0	1/1:20,11:31:15.05:366,15,0	0/1:18,8:27:9.27:278,0,9	1/1:13,8:21:3.01:73,3,0	1/1:16,14:30:9.03:220,9,0	1/1:16,17:33:18.06:440,18,0	1/1:15,0:14:2.96:19,3,0	0/1:10,2:12:22.60:67,0,23	0/0:13,0:14:12.02:0,12,317	./.	1/1:19,6:25:3.01:36,3,0	0/0:9,0:16:0:0,0,0	0/0:20,0:25:14.97:0,15,122	0/0:7,0:16:17.46:0,17,130	1/1:10,8:18:6.02:147,6,0	1/1:8,0:12:9.03:165,9,0	0/1:28,9:37:15.27:138,0,15	./.
chr10	34824168	.	C	CTGGAAG	27946.58	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-8.395;DP=481;FS=17.533;HRun=0;HaplotypeScore=84.1971;InbreedingCoeff=0.9422;MQ=69.89;MQ0=0;MQRankSum=-12.849;QD=74.52;ReadPosRankSum=1.464;VQSLOD=4.6210;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:44.97:0,45,918	1/1:1,6:7:21.07:765,21,0	0/0:17,0:17:51.01:0,51,975	0/0:20,0:20:59.93:0,60,1304	1/1:5,22:28:63.15:2065,63,0	1/1:4,23:26:51.17:1856,51,0	1/1:4,7:13:24.08:784,24,0	1/1:6,18:32:87.06:2060,87,0	1/1:2,6:14:15.05:546,15,0	1/1:3,15:19:54.11:1676,54,0	1/1:1,14:17:39.07:1193,39,0	0/0:19,0:19:54.17:0,54,1238	1/1:3,16:19:39.13:1332,39,0	1/1:3,5:10:9.03:312,9,0	1/1:4,9:14:33.11:1187,33,0	1/1:0,9:10:21.07:767,21,0	1/1:4,12:18:36.12:1251,36,0	1/1:2,4:9:6.02:190,6,0	1/1:3,11:14:42.14:1407,42,0	1/1:4,21:27:75.04:2303,75,0	1/1:3,11:18:30.10:942,30,0	1/1:1,12:14:36.12:1173,36,0	0/0:14,0:14:42.14:0,42,999	0/0:18,0:18:51.15:0,51,1131	1/1:1,23:24:63.22:2238,63,0	1/1:0,20:22:66.21:2154,66,0	1/1:2,12:16:42.14:1525,42,0	1/1:0,2:2:6.02:219,6,0
chr10	34824848	.	G	GA	2263.61	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-8.918;DP=692;FS=9.172;HRun=7;HaplotypeScore=58.1464;InbreedingCoeff=0.9213;MQ=56.38;MQ0=14;MQRankSum=1.652;QD=29.02;ReadPosRankSum=1.300;VQSLOD=4.0563;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:69.10:0,69,666	0/0:10,0:10:24.03:0,24,232	0/0:22,0:4:3:0,3,29	0/0:21,0:6:9.01:0,9,86	1/1:6,21:28:69.08:811,69,0	0/0:38,0:38:99:0,102,985	0/0:20,0:20:60.08:0,60,574	0/0:34,0:34:87.11:0,87,831	1/1:1,20:21:57.17:689,57,0	0/0:27,0:27:78.13:0,78,753	0/0:19,0:19:54.07:0,54,517	0/0:26,0:26:69.11:0,69,666	0/0:19,0:19:54.09:0,54,521	0/0:25,0:25:69.11:0,69,666	0/0:30,0:30:81.11:0,81,777	0/0:22,0:22:63.10:0,63,608	1/1:1,28:29:75.23:906,75,0	0/0:21,0:21:57.06:0,57,541	0/0:31,0:29:81.10:0,81,774	0/0:27,0:27:78.11:0,78,747	0/0:18,0:18:51.08:0,51,493	0/0:22,0:22:63.10:0,63,608	0/0:22,0:22:60.08:0,60,573	0/0:25,0:25:66.08:0,66,630	0/0:18,0:18:45.07:0,45,435	0/0:24,0:24:60.09:0,60,580	0/0:41,0:41:99:0,108,1037	0/0:23,0:24:69.11:0,69,666
chr10	34826781	.	AT	A	1844.86	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=11.001;DP=511;FS=3.730;HRun=7;HaplotypeScore=44.4952;InbreedingCoeff=0.9504;MQ=66.41;MQ0=0;MQRankSum=0.502;QD=26.74;ReadPosRankSum=3.754;VQSLOD=4.1389;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:69.22:0,69,864	0/0:8,0:8:24.06:0,24,289	0/0:5,0:5:9.03:0,9,113	0/0:5,0:5:14.72:0,15,162	1/1:0,22:22:66.15:672,66,0	0/0:18,0:18:54.16:0,54,667	0/0:8,0:8:21.05:0,21,250	0/0:37,0:37:99:0,108,1325	1/1:0,20:20:57.13:581,57,0	0/0:32,0:32:87.28:0,87,1095	0/0:29,0:29:81.05:0,81,994	0/0:17,0:17:48.14:0,48,593	0/0:14,0:14:39.12:0,39,491	0/0:12,0:12:36.11:0,36,452	0/0:19,0:19:51.16:0,51,642	0/0:22,0:22:66.20:0,66,818	1/1:1,26:27:72.16:734,72,0	0/0:15,0:15:45.14:0,45,565	0/0:16,0:16:45.14:0,45,566	0/0:24,0:24:69.22:0,69,868	0/0:9,0:9:24.07:0,24,290	0/0:12,0:12:36.10:0,36,441	0/0:25,0:25:63.20:0,63,792	0/0:3,0:3:8.99:0,9,95	0/0:28,0:28:84.27:0,84,1056	0/0:34,0:34:90.28:0,90,1121	0/0:15,0:13:42.13:0,42,528	0/0:8,0:8:24.08:0,24,302
chr10	34829321	.	AAAAAAAAAG	A	6335.43	PASS	AB=0.967;AC=30;AF=0.577;AN=52;BaseQRankSum=8.643;DP=470;FS=16.733;HRun=0;HaplotypeScore=154.8006;InbreedingCoeff=0.3280;MQ=47.33;MQ0=5;MQRankSum=-0.892;QD=17.31;ReadPosRankSum=5.023;VQSLOD=2.5579;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:30:9.78:10,0,293	0/0:12,0:12:30.09:0,30,621	0/0:12,0:4:9.03:0,9,141	0/0:9,0:4:9.50:0,10,331	0/0:25,0:25:60.20:0,60,1314	1/1:17,2:18:23.20:405,23,0	1/1:9,0:8:7.78:259,8,0	1/1:32,0:31:15.42:518,15,0	0/0:15,0:15:30.10:0,30,806	1/1:26,2:27:20.66:580,21,0	0/1:16,2:18:12.22:242,0,12	./.	0/1:13,0:13:5.01:149,0,5	0/1:10,1:11:7.54:145,0,8	0/1:11,0:10:4.65:149,0,5	1/1:13,1:14:32.81:450,33,0	0/0:28,0:28:59.73:0,60,1459	0/1:18,0:18:99:305,0,133	1/1:16,1:17:15.65:397,16,0	0/1:28,0:28:2.90:562,0,3	1/1:8,0:8:2.92:41,3,0	1/1:16,1:16:5.95:294,6,0	./.	0/0:3,0:2:5.93:0,6,40	0/1:20,2:22:42.69:356,0,43	1/1:26,1:26:20.72:559,21,0	1/1:28,2:29:17.69:673,18,0	1/1:11,0:10:0.74:241,1,0
chr10	34829322	.	AAAAAAAAG	A	9574.62	PASS	AB=0.860;AC=36;AF=0.692;AN=52;BaseQRankSum=3.986;DP=464;FS=9.290;HRun=0;HaplotypeScore=134.3777;InbreedingCoeff=0.7343;MQ=49.00;MQ0=5;MQRankSum=0.272;QD=26.74;ReadPosRankSum=4.425;VQSLOD=3.5196;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:30:81.16:81,0,171	0/0:12,0:12:30.03:0,30,530	0/0:13,0:5:12:0,12,164	0/0:9,0:4:9.50:0,10,291	0/0:25,0:25:60.14:0,60,1123	1/1:11,8:18:23.44:497,23,0	1/1:5,4:8:19.36:346,19,0	1/1:8,24:31:65.29:926,65,0	0/0:15,0:15:30.10:0,30,703	1/1:10,18:27:59.42:779,59,0	1/1:10,8:18:22.78:328,23,0	./.	1/1:4,8:12:11.67:274,12,0	1/1:3,8:11:8.83:192,9,0	1/1:4,7:10:11.75:275,12,0	1/1:7,6:13:32.43:633,32,0	0/0:27,0:27:56.72:0,57,1221	0/1:11,7:18:32.27:494,0,32	1/1:11,5:16:37.84:602,38,0	1/1:11,17:28:51.16:891,51,0	1/1:1,7:8:2.93:69,3,0	1/1:4,12:15:27.68:426,28,0	./.	0/0:5,0:4:11.86:0,12,80	1/1:9,13:22:7.32:495,7,0	1/1:5,19:23:59.67:866,60,0	1/1:11,18:28:50.12:1003,50,0	1/1:3,8:10:17.94:394,18,0
chr10	34829323	.	AAAAAAAG	A	7760.39	PASS	AB=0.971;AC=36;AF=0.643;AN=56;BaseQRankSum=5.625;DP=479;FS=2.807;HRun=0;HaplotypeScore=129.2494;InbreedingCoeff=0.7929;MQ=48.92;MQ0=5;MQRankSum=0.508;QD=21.74;ReadPosRankSum=3.700;VQSLOD=4.6456;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:31,2:30:43.92:188,0,44	0/0:12,0:12:26.98:0,27,408	0/0:13,0:5:11.99:0,12,156	0/0:9,0:4:9.50:0,10,258	0/0:26,0:26:60.11:0,60,999	1/1:17,0:16:23.68:384,24,0	1/1:9,0:8:20.36:280,20,0	1/1:31,0:30:65.21:737,65,0	0/0:15,0:15:30.10:0,30,593	1/1:27,1:27:59.14:698,59,0	1/1:17,1:18:23.09:287,23,0	0/0:6,0:6:17.56:0,18,107	1/1:12,0:12:11.59:198,12,0	1/1:11,0:11:8.89:148,9,0	1/1:11,0:10:11.83:198,12,0	1/1:14,0:14:34.52:496,35,0	0/0:28,0:28:53.55:0,54,961	0/1:20,0:20:6.10:390,0,6	1/1:16,0:16:28.77:465,29,0	1/1:28,0:28:51.89:689,52,0	1/1:8,0:8:2.95:50,3,0	1/1:16,0:15:28.24:344,28,0	0/0:7,0:7:20.52:0,21,120	0/0:6,0:5:11.86:0,12,80	1/1:22,0:22:23.51:388,24,0	1/1:23,0:22:59.82:707,60,0	1/1:27,2:28:50.80:844,51,0	1/1:11,0:10:17.95:270,18,0
chr10	34829324	.	AAAAAAG	A	6988.19	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=5.296;DP=471;FS=0.000;HRun=0;HaplotypeScore=123.0743;InbreedingCoeff=0.9195;MQ=49.42;MQ0=5;MQRankSum=-1.447;QD=20.20;ReadPosRankSum=3.434;VQSLOD=3.9321;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:16,17:30:12.10:250,12,0	0/0:12,0:12:21.06:0,21,302	0/0:13,0:5:11.66:0,12,118	0/0:9,0:4:9.03:0,9,219	0/0:28,0:28:62.39:0,62,881	1/1:15,0:14:23.89:337,24,0	1/1:9,0:8:20.04:249,20,0	1/1:29,0:28:64.55:668,65,0	0/0:15,0:15:30.01:0,30,459	1/1:27,0:26:59.63:639,60,0	1/1:16,0:16:21.71:241,22,0	0/0:7,0:7:20.50:0,20,124	1/1:11,0:11:11.89:175,12,0	1/1:10,0:10:8.98:130,9,0	1/1:10,0:9:11.94:175,12,0	1/1:13,0:13:33.05:440,33,0	0/0:28,0:28:44.58:0,45,707	1/1:20,0:20:11.66:350,12,0	1/1:17,0:17:30.01:428,30,0	1/1:28,0:28:52.61:619,53,0	1/1:7,0:7:3.01:44,3,0	1/1:16,0:15:28.84:316,29,0	0/0:7,0:7:20.52:0,21,120	0/0:6,0:5:11.84:0,12,79	1/1:22,0:22:23.71:341,24,0	1/1:23,0:22:59.87:654,60,0	1/1:29,0:28:50.30:702,50,0	1/1:11,0:10:17.49:229,17,0
chr10	34829325	.	A	AAAG	560.24	PASS	AB=0.749;AC=4;AF=0.071;AN=56;BaseQRankSum=-4.954;DP=441;FS=7.715;HRun=0;HaplotypeScore=137.6918;InbreedingCoeff=-0.0992;MQ=51.30;MQ0=5;MQRankSum=1.138;QD=5.05;ReadPosRankSum=-1.282;VQSLOD=2.1482;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:32,0:29:9:9,0,113	0/0:12,0:12:20.99:0,21,188	0/0:13,0:5:6.25:0,6,32	0/0:9,0:4:9.40:0,9,67	0/1:13,1:31:68.35:343,0,68	0/0:11,0:10:17.78:0,18,144	0/0:7,0:7:19.76:0,20,147	0/0:26,0:25:59.99:0,60,460	0/1:9,4:16:99:108,0,104	0/0:25,0:24:46.76:0,47,368	0/0:12,0:12:24.49:0,24,162	0/0:8,0:8:18.39:0,18,137	0/0:9,0:9:4.93:0,5,51	0/0:9,0:9:7.80:0,8,53	0/0:8,0:8:11.45:0,11,76	0/0:12,0:12:32.46:0,32,232	0/1:16,1:32:99:206,0,109	0/0:15,0:15:37.15:0,37,267	0/0:17,0:17:26.31:0,26,246	0/0:25,0:25:42.54:0,43,304	0/0:7,0:7:2.99:0,3,24	0/0:14,0:13:26.75:0,27,192	0/0:7,0:7:20.86:0,21,155	0/0:7,0:6:14.90:0,15,110	0/0:17,0:17:20.73:0,21,156	0/0:21,0:20:57.07:0,57,447	0/0:28,0:28:46.64:0,47,347	0/0:10,0:9:14.68:0,15,103
chr10	34829331	.	AAAGC	A	1843.82	PASS	AB=0.990;AC=28;AF=0.500;AN=56;BaseQRankSum=10.275;DP=435;FS=26.607;HRun=0;HaplotypeScore=122.5739;InbreedingCoeff=0.2759;MQ=55.80;MQ0=3;MQRankSum=-6.788;QD=6.31;ReadPosRankSum=7.193;VQSLOD=0.5608;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:20,1:20:10.89:68,11,0	0/0:12,0:12:33.03:0,33,410	0/0:14,0:6:9.28:0,9,132	0/0:10,0:5:12.04:0,12,272	0/0:32,0:32:62.91:0,63,1010	1/1:13,0:12:3.10:84,3,0	0/1:9,0:8:22.46:71,0,22	0/1:27,1:27:49.20:162,0,49	0/0:17,0:17:20.83:0,21,330	1/1:22,1:22:21.95:127,22,0	0/1:13,0:13:33.30:53,0,33	0/0:11,0:11:33.07:0,33,399	1/1:8,0:8:11.79:82,12,0	1/1:9,0:9:8.76:59,9,0	1/1:7,0:7:11.69:76,12,0	0/1:13,1:14:57.78:118,0,58	0/0:30,0:30:28.43:0,28,467	0/1:14,0:14:23.61:103,0,24	0/1:19,0:19:38.65:133,0,39	1/1:19,1:20:20.21:163,20,0	0/1:8,0:8:8.69:9,0,15	0/1:14,0:13:1.26:68,0,1	0/0:9,0:9:27.07:0,27,315	0/0:8,0:7:18.06:0,18,248	1/1:15,0:15:22.98:143,23,0	0/1:23,0:22:8.76:166,0,9	1/1:24,1:25:18.24:300,18,0	0/1:9,0:9:13.88:51,0,14
chr10	34830273	.	T	TA	4001.69	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=7.141;DP=764;FS=1.350;HRun=1;HaplotypeScore=75.9151;InbreedingCoeff=0.9989;MQ=89.73;MQ0=0;MQRankSum=-3.351;QD=40.42;ReadPosRankSum=2.046;VQSLOD=4.3426;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:83.83:0,84,1043	0/0:13,0:13:39.13:0,39,506	0/0:28,0:28:84.01:0,84,1063	0/0:30,0:30:83.90:0,84,1023	0/0:31,0:31:87.25:0,87,1109	0/0:31,0:31:90.24:0,90,1112	0/0:14,0:14:42.14:0,42,545	0/0:44,0:44:99:0,123,1551	0/0:33,0:33:96.28:0,96,1217	0/0:43,0:43:99:0,126,1613	0/0:31,0:31:87.27:0,87,1112	1/1:0,35:35:93.32:1394,93,0	0/0:24,0:24:66.20:0,66,841	0/0:20,0:20:57.18:0,57,736	0/0:23,0:23:69.19:0,69,867	0/0:18,0:18:54.15:0,54,685	0/0:15,0:15:45.15:0,45,584	0/0:9,0:9:24.08:0,24,312	0/0:19,0:19:51.11:0,51,647	0/0:40,0:40:99:0,117,1494	0/0:23,0:23:69.22:0,69,896	0/0:26,0:26:78.25:0,78,1000	1/1:0,32:32:90.30:1349,90,0	1/1:0,32:32:84.28:1259,84,0	0/0:30,0:30:90.28:0,90,1142	0/0:27,0:27:75.24:0,75,959	0/0:55,0:55:99:0,165,2095	0/0:9,0:9:27.09:0,27,341
chr10	34830424	.	C	CT	2708.94	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-7.446;DP=696;FS=3.539;HRun=2;HaplotypeScore=69.3351;InbreedingCoeff=0.9998;MQ=89.02;MQ0=0;MQRankSum=-2.827;QD=37.11;ReadPosRankSum=3.040;VQSLOD=4.4794;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:93.29:0,93,1149	0/0:16,0:16:48.15:0,48,595	0/0:26,0:26:30.62:0,31,756	0/0:26,0:26:62.33:0,62,679	0/0:29,0:29:78.23:0,78,954	0/0:26,0:26:78.23:0,78,953	0/0:24,0:24:72.23:0,72,893	0/0:35,0:35:93.28:0,93,1141	0/0:22,0:22:60.15:0,60,717	0/0:20,0:20:57.17:0,57,696	0/0:27,0:27:78.24:0,78,967	1/1:0,21:21:60.20:864,60,0	0/0:20,0:20:54.17:0,54,669	0/0:22,0:22:63.20:0,63,781	0/0:21,0:21:63.19:0,63,768	0/0:25,0:25:72.21:0,72,880	0/0:25,0:25:72.23:0,72,892	0/0:14,0:14:42.11:0,42,502	0/0:14,0:14:39.12:0,39,484	0/0:36,0:36:99:0,108,1322	0/0:27,0:27:78.25:0,78,966	0/0:29,0:29:87.27:0,87,1078	1/1:2,21:23:57.19:821,57,0	1/1:0,29:29:81.27:1167,81,0	0/0:26,0:25:72.21:0,72,880	0/0:31,0:31:90.27:0,90,1105	0/0:34,0:34:99:0,99,1199	0/0:16,0:16:48.15:0,48,595
chr10	34831051	.	TA	T	1219.79	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=7.892;DP=468;FS=0.000;HRun=1;HaplotypeScore=76.5359;InbreedingCoeff=0.9744;MQ=50.65;MQ0=6;MQRankSum=0.410;QD=31.28;ReadPosRankSum=0.395;VQSLOD=3.2163;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:37:90.31:0,90,1437	0/0:4,0:4:12.04:0,12,192	0/0:25,0:14:35.43:0,35,543	0/0:24,0:13:33.11:0,33,505	0/0:24,0:24:63.21:0,63,1006	0/0:14,0:14:30.10:0,30,479	0/0:12,0:12:36.12:0,36,574	0/0:25,0:25:72.23:0,72,1128	0/0:10,0:9:27.09:0,27,431	0/0:17,0:17:48.15:0,48,744	0/0:18,0:17:48.16:0,48,767	1/1:0,13:13:39.13:506,39,0	0/0:18,0:18:48.15:0,48,743	0/0:16,0:16:45.15:0,45,719	0/0:13,0:13:36.12:0,36,575	0/0:7,0:7:21.07:0,21,336	0/0:25,0:25:57.19:0,57,910	0/0:17,0:17:25.27:0,25,696	0/0:11,0:11:30.09:0,30,455	0/0:33,0:33:93.27:0,93,1459	0/0:14,0:14:42.14:0,42,671	0/0:8,0:8:24.08:0,24,383	1/1:0,13:12:33.11:428,33,0	1/1:0,13:13:33.11:428,33,0	0/0:15,0:15:30.10:0,30,479	0/0:21,0:21:60.20:0,60,958	0/0:16,0:16:42.14:0,42,666	0/0:4,0:4:12.04:0,12,186
chr10	34831106	.	CAA	C	345.60	PASS	AB=0.885;AC=15;AF=0.278;AN=54;BaseQRankSum=-7.629;DP=352;FS=16.242;HRun=12;HaplotypeScore=132.4095;InbreedingCoeff=-0.4246;MQ=45.76;MQ0=4;MQRankSum=-1.551;QD=1.50;ReadPosRankSum=-2.502;VQSLOD=-0.6466;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:32,3:32:99:138,0,245	0/0:6,0:6:7.76:0,8,89	0/0:5,0:3:5.99:0,6,56	./.	0/0:13,1:13:14.90:0,15,110	0/0:19,3:22:20.54:0,21,358	0/0:3,0:3:2.99:0,3,24	0/1:9,1:14:16.94:17,0,92	0/0:4,0:3:5.74:0,6,36	0/1:14,1:15:10.26:10,0,138	0/1:19,2:20:51.12:51,0,156	0/0:10,0:10:26.91:0,27,211	0/1:7,3:10:1.81:2,0,144	0/1:7,2:9:15.73:16,0,68	0/1:6,1:7:17.14:17,0,49	0/1:2,1:3:21.60:22,0,28	0/1:23,1:24:12.81:13,0,198	0/1:14,1:14:44.05:44,0,113	0/1:11,3:13:65.28:65,0,84	0/1:24,3:27:19.06:19,0,311	0/0:6,0:6:0.46:0,0,40	0/0:5,0:6:5.99:0,6,48	0/0:9,1:9:23.90:0,24,185	0/1:9,0:9:12.53:13,0,87	0/1:14,0:14:22.51:23,0,200	0/0:23,2:25:8.87:0,9,414	0/1:13,1:14:41.11:41,0,130	0/0:6,0:6:11.97:0,12,95
chr10	34831108	.	A	AT	488.74	PASS	AB=1.000;AC=10;AF=0.179;AN=56;BaseQRankSum=1.008;DP=392;FS=19.397;HRun=0;HaplotypeScore=148.0452;InbreedingCoeff=0.3358;MQ=50.13;MQ0=4;MQRankSum=-0.039;QD=5.49;ReadPosRankSum=-3.197;VQSLOD=1.7103;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:35:60.41:0,60,342	0/0:6,0:6:16.58:0,17,86	0/0:8,0:6:0.03:0,0,88	0/0:5,0:2:3:0,3,29	0/1:19,0:18:16.71:17,0,127	0/0:23,0:23:47.58:0,48,249	0/0:3,0:3:8.74:0,9,63	0/0:19,0:19:47.04:0,47,264	0/1:5,0:4:11.65:29,0,12	0/0:15,0:15:23.63:0,24,183	0/0:21,0:20:21.96:0,22,242	1/1:0,9:9:26.98:239,27,0	0/0:10,0:10:22.26:0,22,103	0/0:9,0:9:11.21:0,11,81	0/0:11,0:11:21.08:0,21,144	0/0:5,0:5:11.30:0,11,57	0/0:23,0:23:34.89:0,35,273	0/0:13,0:12:34.23:0,34,188	0/1:21,0:20:12:12,0,119	0/0:29,0:29:71.63:0,72,422	0/0:7,0:7:10.97:0,11,90	0/0:7,0:7:11.33:0,11,71	1/1:3,8:10:29.58:235,30,0	1/1:2,7:9:0.04:95,0,0	0/0:17,0:17:2.05:0,2,141	0/0:28,0:28:65.12:0,65,306	0/1:15,0:15:6.47:6,0,163	0/0:6,0:6:14.12:0,14,69
chr10	34831111	.	A	AT	2133.36	PASS	AB=1.000;AC=41;AF=0.732;AN=56;BaseQRankSum=7.468;DP=386;FS=10.345;HRun=0;HaplotypeScore=137.5390;InbreedingCoeff=-0.0989;MQ=50.05;MQ0=4;MQRankSum=-5.651;QD=5.72;ReadPosRankSum=7.025;VQSLOD=2.4975;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:37,0:34:31.56:139,0,32	0/1:6,0:6:4.46:13,0,4	0/0:8,0:6:14.48:0,14,92	0/0:5,0:2:2.84:0,3,14	0/1:19,0:18:6.66:176,0,7	1/1:25,0:25:7.07:75,7,0	1/1:1,0:1:2.04:6,2,0	0/1:18,0:18:35.58:94,0,36	1/1:7,0:6:12.81:72,13,0	1/1:14,0:14:4.42:45,4,0	0/1:19,0:18:18.62:113,0,19	1/1:1,9:10:29.43:194,29,0	1/1:11,0:11:17.26:64,17,0	1/1:8,0:8:4.63:31,5,0	1/1:10,0:10:3.13:112,3,0	1/1:6,0:6:6.94:73,7,0	0/1:21,0:21:49.83:54,0,50	1/1:13,0:12:0.02:29,0,0	0/1:20,0:19:14.41:143,0,14	0/1:27,0:27:47.30:116,0,47	0/1:7,0:7:14.01:20,0,14	0/1:7,0:7:22.78:23,0,29	1/1:4,8:11:17.80:151,18,0	1/1:2,7:9:15.64:110,16,0	1/1:17,0:17:15.29:130,15,0	1/1:28,0:28:26.46:148,26,0	0/1:14,0:14:3.47:96,0,3	1/1:7,0:7:13.20:61,13,0
chr10	34831112	.	A	AT	4315.56	PASS	AB=0.696;AC=48;AF=0.857;AN=56;BaseQRankSum=4.138;DP=380;FS=20.524;HRun=0;HaplotypeScore=129.5208;InbreedingCoeff=0.2336;MQ=50.09;MQ0=4;MQRankSum=-2.114;QD=11.76;ReadPosRankSum=6.530;VQSLOD=3.2935;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,24:34:34.15:388,34,0	1/1:1,5:6:17.72:115,18,0	0/0:8,0:6:14.48:0,14,96	0/0:5,0:2:2.74:0,3,12	1/1:11,7:17:3.11:127,3,0	0/1:7,17:24:10.73:276,0,11	1/1:0,1:1:2.94:18,3,0	1/1:10,7:17:13.19:183,13,0	0/1:4,3:6:22.06:24,0,22	1/1:4,10:14:26.90:211,27,0	1/1:10,10:19:48.16:283,48,0	1/1:10,0:10:28.12:179,28,0	1/1:4,7:11:25.06:146,25,0	1/1:3,5:8:5.55:67,6,0	1/1:7,3:10:13.73:107,14,0	1/1:4,2:6:4.40:42,4,0	1/1:6,14:20:47:292,47,0	1/1:4,8:11:29.05:189,29,0	0/1:14,7:20:0.13:119,0,0	1/1:7,17:24:41.30:321,41,0	1/1:3,3:6:7.10:39,7,0	0/1:4,2:6:5.62:44,0,6	1/1:13,0:12:3.10:139,3,0	1/1:9,0:9:5:68,5,0	1/1:5,12:17:26.59:229,27,0	1/1:6,22:28:61.45:445,61,0	1/1:4,8:13:35.07:196,35,0	1/1:5,4:9:5.34:69,5,0
chr10	34831115	.	A	ATAAAT	15485.76	PASS	AB=0.708;AC=51;AF=0.911;AN=56;BaseQRankSum=-1.112;DP=390;FS=11.101;HRun=0;HaplotypeScore=111.2011;InbreedingCoeff=0.6337;MQ=53.27;MQ0=4;MQRankSum=-4.716;QD=41.30;ReadPosRankSum=5.105;VQSLOD=4.0122;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:14,16:35:64.03:1310,64,0	1/1:0,5:5:15.05:368,15,0	0/0:10,0:8:14.84:0,15,140	0/0:5,0:2:3.01:0,3,39	1/1:10,0:16:24.52:633,25,0	1/1:8,17:25:68.24:1371,68,0	1/1:1,1:2:6:97,6,0	0/1:10,4:17:5.51:475,0,6	1/1:4,0:6:18.03:242,18,0	1/1:5,8:15:20.92:584,21,0	1/1:10,7:19:51.52:864,52,0	1/1:11,0:11:32.87:287,33,0	1/1:4,7:11:25.90:565,26,0	1/1:3,3:8:17.53:287,18,0	1/1:7,2:10:11.84:395,12,0	1/1:4,1:6:17.53:243,18,0	1/1:5,0:19:39.73:806,40,0	1/1:6,7:13:32.13:538,32,0	1/1:14,3:20:40.99:557,41,0	1/1:7,15:24:53.46:1353,53,0	1/1:3,3:6:11.96:234,12,0	1/1:4,2:6:15:244,15,0	1/1:13,0:12:18.53:250,19,0	1/1:9,0:9:17.57:173,18,0	1/1:6,10:18:36.84:930,37,0	1/1:6,18:28:67.97:1597,68,0	1/1:5,5:14:41.25:701,41,0	1/1:7,4:11:18.06:380,18,0
chr10	34831202	.	A	ATG	1338.36	PASS	AB=0.985;AC=8;AF=0.143;AN=56;BaseQRankSum=-4.524;DP=447;FS=0.687;HRun=0;HaplotypeScore=130.3383;InbreedingCoeff=0.5829;MQ=66.83;MQ0=1;MQRankSum=0.561;QD=15.38;ReadPosRankSum=0.836;VQSLOD=3.5665;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:31,1:30:19.91:20,0,328	0/0:8,0:8:24.04:0,24,266	0/1:7,0:6:11.17:11,0,44	0/0:12,0:12:15.72:0,16,110	0/0:19,0:19:23.82:0,24,172	0/0:21,0:21:5.96:0,6,45	0/0:15,0:15:14.94:0,15,119	0/0:18,0:18:39.06:0,39,410	0/0:13,0:13:32.98:0,33,324	0/0:11,0:11:33:0,33,312	0/0:20,0:20:14.75:0,15,103	1/1:8,2:10:23.91:305,24,0	0/0:13,0:12:14.68:0,15,139	0/0:18,0:18:8.88:0,9,87	0/0:13,0:13:23.96:0,24,206	0/0:12,0:12:20.99:0,21,187	0/0:21,0:22:20.85:0,21,156	0/0:14,0:14:11.92:0,12,108	0/0:15,0:15:38.14:0,38,354	0/0:13,0:13:6:0,6,52	0/0:22,0:22:23.65:0,24,263	0/0:12,0:11:21.03:0,21,229	1/1:17,2:19:42.08:533,42,0	1/1:17,2:19:45.13:620,45,0	0/0:16,0:16:3:0,3,28	0/0:23,0:23:53.96:0,54,559	0/0:16,0:16:20.82:0,21,184	0/0:14,0:14:5.99:0,6,50
chr10	34831216	.	GCACACA	G	2152.71	PASS	AB=0.958;AC=30;AF=0.577;AN=52;BaseQRankSum=0.392;DP=437;FS=2.466;HRun=0;HaplotypeScore=138.6488;InbreedingCoeff=0.4072;MQ=58.24;MQ0=6;MQRankSum=-5.258;QD=8.03;ReadPosRankSum=0.579;VQSLOD=2.8076;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:29:45.27:0,45,1219	0/0:11,0:11:12.04:0,12,304	./.	./.	0/0:17,0:17:12.04:0,12,282	1/1:20,0:20:0.46:1,0,0	1/1:11,0:11:6.02:109,6,0	0/1:20,0:19:15.75:16,0,36	0/1:14,0:14:17.54:18,0,158	1/1:12,0:11:3.75:207,4,0	0/0:22,0:22:1.68:0,2,14	0/0:8,0:8:11.48:0,11,186	1/1:12,0:11:12.04:194,12,0	1/1:20,0:20:8.77:165,9,0	1/1:12,0:12:12.04:221,12,0	0/1:10,0:10:43.06:190,0,43	0/0:23,0:23:24.08:0,24,493	1/1:12,0:12:9.03:158,9,0	0/1:16,0:16:8.97:149,0,9	1/1:14,1:15:3.01:54,3,0	0/1:22,0:21:6.19:6,0,14	0/1:8,4:11:0.07:0,0,0	0/0:20,0:20:21.07:0,21,492	0/0:22,0:22:42.14:0,42,1146	1/1:14,0:14:3.01:55,3,0	1/1:22,0:22:15.47:424,15,0	1/1:13,0:13:13.99:271,14,0	1/1:11,0:11:6.02:87,6,0
chr10	34832295	.	A	AT	2101.24	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=12.110;DP=678;FS=2.990;HRun=7;HaplotypeScore=80.0091;InbreedingCoeff=0.9997;MQ=74.68;MQ0=0;MQRankSum=-3.214;QD=26.60;ReadPosRankSum=1.034;VQSLOD=4.4094;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:90.13:0,90,869	0/0:13,0:13:39.04:0,39,366	0/0:14,0:14:33.03:0,33,313	0/0:13,0:13:36.01:0,36,336	0/0:36,0:36:99:0,99,956	0/0:23,0:23:63.09:0,63,603	0/0:19,0:19:51.08:0,51,493	0/0:29,0:29:75.08:0,75,711	0/0:21,0:21:63.10:0,63,608	0/0:27,0:27:81.12:0,81,778	0/0:34,0:34:90.13:0,90,869	1/1:2,34:36:84.14:1015,84,0	0/0:15,0:15:42.06:0,42,406	0/0:20,0:20:51.08:0,51,492	0/0:27,0:27:66.08:0,66,631	0/0:17,0:17:45.07:0,45,435	0/0:24,0:24:69.08:0,69,659	0/0:14,0:14:42.07:0,42,406	0/0:23,0:23:60.08:0,60,572	0/0:29,0:29:81.11:0,81,777	0/0:19,0:19:45.07:0,45,435	0/0:22,0:22:63.10:0,63,608	1/1:6,23:29:69.21:831,69,0	1/1:1,13:14:33.10:399,33,0	0/0:34,0:34:99:0,99,951	0/0:27,0:27:69.11:0,69,666	0/0:34,0:34:87.12:0,87,835	0/0:26,0:26:75.12:0,75,724
chr10	34835024	.	A	AC	1758.07	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.521;DP=581;FS=1.265;HRun=1;HaplotypeScore=133.4997;InbreedingCoeff=0.9981;MQ=70.40;MQ0=0;MQRankSum=-4.968;QD=35.88;ReadPosRankSum=-0.408;VQSLOD=3.1945;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:90.25:0,90,1137	0/0:10,0:10:30.10:0,30,387	0/0:24,0:24:69.17:0,69,857	0/0:18,0:18:46.69:0,47,577	0/0:25,0:25:72.23:0,72,934	0/0:20,0:20:57.19:0,57,740	0/0:17,0:17:48.16:0,48,623	0/0:27,0:27:75.24:0,75,973	0/0:22,0:22:57.16:0,57,711	0/0:25,0:25:75.24:0,75,974	0/0:17,0:17:51.17:0,51,662	1/1:2,14:16:39.14:614,39,0	0/0:12,0:12:36.12:0,36,467	0/0:21,0:21:54.18:0,54,699	0/0:18,0:18:54.18:0,54,700	0/0:24,0:24:66.20:0,66,843	0/0:29,0:29:84.27:0,84,1090	0/0:21,0:21:51.11:0,51,626	0/0:17,0:16:48.16:0,48,623	0/0:24,0:24:69.22:0,69,896	0/0:26,0:26:72.21:0,72,919	0/0:17,0:17:45.15:0,45,584	1/1:1,10:11:30.10:449,30,0	1/1:2,20:22:52.63:838,53,0	0/0:16,0:16:45.15:0,45,581	0/0:29,0:29:87.28:0,87,1129	0/0:31,0:31:78.25:0,78,1012	0/0:7,0:7:21.07:0,21,273
chr10	34835068	.	CG	C	776.12	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-1.333;DP=492;FS=53.290;HRun=1;HaplotypeScore=147.6472;InbreedingCoeff=0.9811;MQ=85.79;MQ0=0;MQRankSum=-6.141;QD=25.87;ReadPosRankSum=1.495;VQSLOD=-0.4690;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:87.27:0,87,1346	0/0:6,0:6:15.05:0,15,238	0/0:28,0:28:63.42:0,63,1068	0/0:22,0:20:51.14:0,51,714	0/0:19,0:19:57.19:0,57,857	0/0:22,0:22:60.17:0,60,894	0/0:17,0:17:51.17:0,51,792	0/0:26,0:26:75.07:0,75,1114	0/0:16,0:16:42.13:0,42,644	0/0:15,0:15:42.14:0,42,671	0/0:14,0:14:39.12:0,39,598	1/1:0,12:12:36.08:478,36,0	0/0:10,0:10:30.09:0,30,436	0/0:24,0:24:69.24:0,69,1096	0/0:13,0:13:39.13:0,39,619	0/0:20,0:20:57.18:0,57,878	0/0:14,0:14:42.14:0,42,670	0/0:16,0:16:45.15:0,45,716	0/0:15,0:15:42:0,42,589	0/0:14,0:14:39.13:0,39,614	0/0:16,0:16:42.06:0,42,638	0/0:20,0:20:48.16:0,48,748	1/1:0,7:7:21.07:291,21,0	1/1:0,11:11:12:145,12,0	0/0:13,0:13:29.97:0,30,436	0/0:25,0:25:72.25:0,72,1143	0/0:30,0:30:72.18:0,72,1091	0/0:12,0:12:36.12:0,36,574
chr10	34835096	.	TC	T	9229.84	PASS	AC=46;AF=0.920;AN=50;BaseQRankSum=3.313;DP=373;FS=3.597;HRun=3;HaplotypeScore=96.0532;InbreedingCoeff=0.9036;MQ=63.42;MQ0=16;MQRankSum=-4.854;QD=26.91;ReadPosRankSum=4.042;VQSLOD=4.1798;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,24:25:60.19:743,60,0	1/1:0,4:3:6.02:74,6,0	0/0:15,0:14:31.34:0,31,405	0/0:15,0:9:16.83:0,17,208	1/1:1,12:13:18.01:205,18,0	1/1:0,17:16:45.14:550,45,0	1/1:0,17:17:42.12:487,42,0	1/1:2,16:16:42.10:504,42,0	1/1:2,9:10:27.08:328,27,0	1/1:2,14:13:39.12:482,39,0	1/1:0,14:12:14.75:185,15,0	./.	1/1:1,6:7:18.06:223,18,0	1/1:1,17:18:48.15:588,48,0	1/1:0,14:14:42.13:520,42,0	1/1:0,14:14:39.12:477,39,0	1/1:2,13:15:39.12:478,39,0	1/1:2,13:15:33.10:404,33,0	1/1:3,13:13:33.07:392,33,0	1/1:1,7:8:15.05:186,15,0	1/1:3,9:10:12.04:142,12,0	1/1:1,22:18:33.10:408,33,0	./.	./.	1/1:1,14:13:24.08:297,24,0	1/1:0,17:16:48.15:593,48,0	1/1:0,19:17:44.92:518,45,0	1/1:2,13:15:36.11:446,36,0
chr10	34838408	.	T	TA	4926.19	PASS	AB=0.689;AC=37;AF=0.771;AN=48;BaseQRankSum=0.538;DP=213;FS=48.901;HRun=8;HaplotypeScore=47.3801;InbreedingCoeff=0.6269;MQ=44.26;MQ0=4;MQRankSum=-2.086;QD=29.68;ReadPosRankSum=-0.146;VQSLOD=1.6121;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,2:1:3.01:34,3,0	./.	0/0:12,0:8:17.24:0,17,136	0/1:8,0:2:21.45:22,0,21	0/0:11,0:11:30.01:0,30,274	1/1:0,8:8:24.07:277,24,0	1/1:1,7:8:18.05:208,18,0	1/1:1,10:10:30.08:336,30,0	0/0:8,0:8:21.01:0,21,192	1/1:0,19:19:57.17:658,57,0	1/1:0,5:5:15.04:173,15,0	./.	1/1:2,6:8:21.05:234,21,0	0/1:1,8:9:0.37:250,0,0	0/1:1,6:7:6.39:186,0,6	1/1:0,8:8:21.06:242,21,0	0/0:14,0:14:39.02:0,39,357	1/1:0,5:5:12.04:138,12,0	1/1:1,8:9:24.07:277,24,0	1/1:0,14:14:42.12:484,42,0	1/1:0,1:1:3.01:35,3,0	1/1:0,9:9:24.07:277,24,0	./.	./.	1/1:0,7:7:21.06:239,21,0	1/1:0,13:13:39.10:441,39,0	1/1:0,6:6:15.04:173,15,0	1/1:1,7:8:21.06:242,21,0
chr10	34845266	.	AAT	A	8019.36	PASS	AC=46;AF=0.920;AN=50;BaseQRankSum=3.241;DP=265;FS=120.294;HRun=0;HaplotypeScore=91.1980;InbreedingCoeff=0.7768;MQ=49.51;MQ0=8;MQRankSum=-4.063;QD=33.28;ReadPosRankSum=2.047;VQSLOD=1.1870;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,5:7:20.92:209,21,0	1/1:1,4:5:12.04:175,12,0	0/0:13,0:10:23.43:0,23,373	0/0:10,0:7:12.04:0,12,208	1/1:13,0:13:26.91:309,27,0	1/1:3,6:8:21.01:264,21,0	1/1:4,4:7:18.04:229,18,0	1/1:8,15:22:8.43:656,8,0	1/1:10,1:11:29.99:348,30,0	1/1:2,14:16:48.07:638,48,0	1/1:2,13:15:45.13:614,45,0	./.	1/1:4,10:12:36.10:481,36,0	1/1:1,8:9:27.04:345,27,0	1/1:0,5:5:15.05:212,15,0	1/1:2,10:11:33.07:434,33,0	1/1:5,0:5:5.89:59,6,0	1/1:1,3:3:9.03:123,9,0	1/1:5,11:14:33.07:442,33,0	1/1:1,14:15:42.10:588,42,0	1/1:2,3:5:14.99:167,15,0	1/1:1,4:4:5.99:65,6,0	./.	./.	1/1:1,8:9:27.05:370,27,0	1/1:1,14:15:42.05:556,42,0	1/1:1,15:15:45.14:623,45,0	1/1:2,2:3:9.01:112,9,0
chr10	34845267	.	AT	A	4445.64	PASS	AC=46;AF=0.920;AN=50;BaseQRankSum=4.457;DP=253;FS=120.491;HRun=1;HaplotypeScore=100.0814;InbreedingCoeff=0.7940;MQ=50.64;MQ0=1;MQRankSum=-4.023;QD=19.33;ReadPosRankSum=1.723;VQSLOD=0.7705;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,1:8:23.40:155,23,0	1/1:5,0:5:11.86:78,12,0	0/0:13,0:10:23.56:0,24,309	0/0:10,0:7:11.96:0,12,164	1/1:1,11:12:27.04:327,27,0	1/1:8,0:7:20.80:144,21,0	1/1:6,0:6:17.86:132,18,0	1/1:22,0:21:18.83:349,19,0	1/1:3,8:11:29.97:317,30,0	1/1:16,0:16:47.41:322,47,0	1/1:14,1:15:44.35:316,44,0	./.	1/1:11,1:12:35.49:257,35,0	1/1:9,0:9:26.55:178,27,0	1/1:5,0:5:14.64:91,15,0	1/1:12,0:11:32.47:216,32,0	1/1:2,3:5:5.74:58,6,0	1/1:3,0:3:8.72:50,9,0	1/1:14,0:13:32.59:224,33,0	1/1:15,0:15:41.51:274,42,0	1/1:4,1:5:14.70:113,15,0	1/1:5,0:4:5.95:41,6,0	./.	./.	1/1:9,0:9:26.68:176,27,0	1/1:14,0:14:41.09:265,41,0	1/1:16,0:15:44.18:298,44,0	1/1:3,0:3:8.93:64,9,0
chr10	34845276	.	AAT	A	2842.17	PASS	AC=48;AF=0.923;AN=52;BaseQRankSum=4.933;DP=279;FS=132.645;HRun=0;HaplotypeScore=108.6528;InbreedingCoeff=0.7290;MQ=57.32;MQ0=1;MQRankSum=-5.240;QD=11.55;ReadPosRankSum=3.706;VQSLOD=0.8740;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,0:9:21.94:112,22,0	1/1:6,0:6:10.45:43,10,0	0/0:17,0:14:38.99:0,39,565	0/0:13,0:10:18.05:0,18,281	1/1:2,8:10:24.03:315,24,0	1/1:10,0:9:19.27:89,19,0	1/1:8,0:8:17.11:64,17,0	1/1:18,0:17:10.90:132,11,0	1/1:4,8:12:27.09:385,27,0	1/1:19,0:19:50.02:219,50,0	1/1:19,0:19:48.73:236,49,0	./.	1/1:14,0:14:31.22:150,31,0	1/1:8,0:8:18.72:86,19,0	1/1:5,0:5:13.84:73,14,0	1/1:11,0:10:23.79:100,24,0	1/1:3,2:5:9.02:111,9,0	1/1:3,0:3:4.99:18,5,0	1/1:16,0:15:32.86:136,33,0	1/1:16,0:16:37.68:160,38,0	1/1:5,0:5:13.19:68,13,0	1/1:5,0:4:5.49:25,5,0	1/1:1,0:1:2.22:7,2,0	./.	1/1:12,0:12:28.37:113,28,0	1/1:13,0:13:30.46:115,30,0	1/1:18,0:17:37.63:180,38,0	1/1:3,0:3:8.20:36,8,0
chr10	34845277	.	AT	A	8261.52	PASS	AB=1.000;AC=51;AF=0.911;AN=56;BaseQRankSum=3.118;DP=272;FS=114.811;HRun=1;HaplotypeScore=78.9050;InbreedingCoeff=0.7004;MQ=58.01;MQ0=1;MQRankSum=-4.605;QD=34.14;ReadPosRankSum=3.992;VQSLOD=-0.5662;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,8:9:23.73:283,24,0	1/1:1,4:5:12.04:166,12,0	0/0:17,0:14:38.98:0,39,469	0/0:13,0:10:18.04:0,18,240	1/1:9,1:10:24.02:289,24,0	1/1:0,10:9:21.07:291,21,0	1/1:0,8:8:21.03:269,21,0	1/1:5,12:16:17.93:543,18,0	1/1:8,3:11:27.09:347,27,0	1/1:0,19:19:57.13:750,57,0	1/1:0,19:19:54.18:746,54,0	1/1:2,0:2:2.98:21,3,0	1/1:1,12:13:27.17:448,27,0	1/1:1,6:7:21.04:270,21,0	1/1:1,4:5:15.04:193,15,0	1/1:0,10:9:27.09:374,27,0	1/1:2,3:5:9.03:119,9,0	1/1:1,2:3:8.99:103,9,0	1/1:0,16:15:39.11:517,39,0	1/1:0,15:15:42.14:580,42,0	1/1:0,5:5:15.05:200,15,0	1/1:0,5:4:6.02:83,6,0	1/1:0,1:1:2.50:9,2,0	0/1:3,0:3:0:0,0,0	1/1:1,11:12:33.07:435,33,0	1/1:0,12:12:36.12:493,36,0	1/1:0,17:16:45.15:608,45,0	1/1:0,3:3:9.03:125,9,0
chr10	34846611	.	TAGA	T	1838.11	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.180;DP=619;FS=2.832;HRun=0;HaplotypeScore=86.5302;InbreedingCoeff=0.9772;MQ=93.32;MQ0=0;MQRankSum=-2.146;QD=40.85;ReadPosRankSum=0.611;VQSLOD=4.6003;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:51.18:0,51,1123	0/0:8,0:8:21.07:0,21,469	0/0:32,0:32:81.28:0,81,1732	0/0:22,0:22:50.29:0,50,1198	0/0:30,0:30:84.27:0,84,1809	0/0:24,0:24:69.24:0,69,1542	0/0:18,0:18:51.18:0,51,1122	0/0:26,0:26:63.21:0,63,1368	0/0:27,0:27:78.27:0,78,1721	0/0:28,0:28:81.28:0,81,1801	0/0:33,0:33:90.30:0,90,1966	1/1:2,16:18:48.16:772,48,0	0/0:23,0:23:69.22:0,69,1476	0/0:21,0:21:60.21:0,60,1334	0/0:25,0:25:75.26:0,75,1655	0/0:26,0:26:75.26:0,75,1676	0/0:15,0:15:42.10:0,42,891	0/0:12,0:12:36.12:0,36,793	0/0:21,0:21:60.21:0,60,1291	0/0:38,0:38:99:0,102,2277	0/0:10,0:10:30.10:0,30,670	0/0:29,0:29:81.28:0,81,1792	1/1:1,16:17:51.17:819,51,0	1/1:3,7:10:24.08:390,24,0	0/0:20,0:20:60.21:0,60,1341	0/0:27,0:27:78.27:0,78,1743	0/0:35,0:35:99:0,105,2255	0/0:3,0:3:9.03:0,9,201
chr10	34846684	.	TC	T	2584.46	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=11.743;DP=611;FS=9.038;HRun=1;HaplotypeScore=65.2460;InbreedingCoeff=0.9942;MQ=72.31;MQ0=0;MQRankSum=-1.615;QD=34.93;ReadPosRankSum=1.872;VQSLOD=3.3783;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:96.31:0,96,1505	0/0:10,0:10:30.07:0,30,431	0/0:8,0:8:23.43:0,23,248	0/0:10,0:10:18.45:0,18,421	0/0:25,0:25:75.19:0,75,1120	0/0:27,0:27:81.26:0,81,1268	0/0:19,0:19:57.11:0,57,855	0/0:38,0:38:99:0,114,1661	0/0:21,0:21:63.20:0,63,982	0/0:28,0:28:84.29:0,84,1342	0/0:23,0:23:69.17:0,69,1064	1/1:0,30:30:81.20:1102,81,0	0/0:21,0:21:63.17:0,63,918	0/0:34,0:34:99:0,102,1602	0/0:30,0:30:90.28:0,90,1384	0/0:20,0:20:60.16:0,60,889	0/0:15,0:15:45.15:0,45,718	0/0:8,0:8:21.07:0,21,327	0/0:18,0:18:54.18:0,54,863	0/0:34,0:34:99:0,102,1580	0/0:15,0:14:45.10:0,45,627	0/0:27,0:27:81.25:0,81,1238	1/1:2,21:23:69.17:912,69,0	1/1:1,20:21:54.08:713,54,0	0/0:15,0:15:45.14:0,45,694	0/0:28,0:28:84.26:0,84,1276	0/0:23,0:22:69.24:0,69,1102	0/0:8,0:8:24.02:0,24,309
chr10	34847236	.	TA	T	8872.45	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=0.120;DP=441;FS=4.379;HRun=9;HaplotypeScore=119.3979;InbreedingCoeff=0.8191;MQ=70.97;MQ0=0;MQRankSum=-5.644;QD=21.18;ReadPosRankSum=4.105;VQSLOD=4.2291;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,9:10:27.01:247,27,0	1/1:0,8:8:18.01:165,18,0	0/0:15,0:15:17.83:0,18,240	0/0:7,0:7:1.34:0,1,45	1/1:4,24:28:65.98:596,66,0	1/1:1,25:26:72.02:652,72,0	1/1:0,10:10:18.01:165,18,0	1/1:7,11:18:29.86:273,30,0	1/1:2,12:14:36.01:329,36,0	1/1:3,22:25:65.53:579,66,0	1/1:5,23:28:60.02:546,60,0	1/1:1,15:16:44.94:402,45,0	1/1:0,11:11:30.01:273,30,0	1/1:3,10:13:27.01:247,27,0	1/1:4,9:13:21.01:192,21,0	1/1:2,8:10:24.01:219,24,0	1/1:2,12:14:33.01:300,33,0	1/1:2,6:8:18:165,18,0	1/1:4,24:28:68.97:628,69,0	1/1:4,17:21:42:382,42,0	1/1:1,9:10:24.01:219,24,0	1/1:1,8:10:20.04:171,20,0	1/1:3,17:20:44.73:402,45,0	1/1:0,4:4:9:80,9,0	1/1:1,12:13:26.53:245,27,0	1/1:1,22:23:66.03:602,66,0	1/1:5,22:27:57.02:519,57,0	1/1:1,10:11:30.01:274,30,0
chr10	34847412	.	A	AT	1276.30	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=1.939;DP=449;FS=2.120;HRun=6;HaplotypeScore=45.9406;InbreedingCoeff=0.9857;MQ=77.92;MQ0=0;MQRankSum=-3.203;QD=27.16;ReadPosRankSum=1.967;VQSLOD=3.9275;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:51.08:0,51,507	0/0:12,0:12:30.06:0,30,306	0/0:13,0:13:26.36:0,26,295	0/0:9,0:9:27.04:0,27,262	0/0:22,0:22:57.11:0,57,574	0/0:10,0:10:27.06:0,27,275	0/0:10,0:10:27.03:0,27,261	0/0:29,0:29:63.12:0,63,633	0/0:14,0:14:36.08:0,36,367	0/0:22,0:22:63.14:0,63,639	0/0:24,0:24:69.14:0,69,697	1/1:4,17:21:48.15:594,48,0	0/0:15,0:15:42.03:0,42,415	0/0:12,0:12:33.07:0,33,337	0/0:16,0:16:45.06:0,45,439	0/0:6,0:6:18.04:0,18,184	0/0:22,0:22:65.80:0,66,645	0/0:18,0:18:41.42:0,41,394	0/0:19,0:19:42.09:0,42,428	0/0:30,0:30:90.19:0,90,911	0/0:7,0:7:21.05:0,21,214	0/0:9,0:9:24.05:0,24,245	1/1:2,16:18:45.14:561,45,0	1/1:0,8:8:21.07:264,21,0	0/0:10,0:10:27.06:0,27,275	0/0:19,0:19:51.11:0,51,520	0/0:29,0:29:78.17:0,78,796	0/0:8,0:8:15.03:0,15,152
chr10	34847850	.	A	AAGTGATCT	4914.84	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=10.921;DP=688;FS=24.119;HRun=0;HaplotypeScore=235.7709;InbreedingCoeff=0.9736;MQ=88.33;MQ0=0;MQRankSum=-10.445;QD=92.73;ReadPosRankSum=0.247;VQSLOD=3.8571;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,144,4334	0/0:8,0:8:21.07:0,21,634	0/0:31,0:31:89.36:0,89,2384	0/0:21,0:21:57.20:0,57,1497	0/0:41,0:41:99:0,123,3534	0/0:21,0:21:63.20:0,63,1781	0/0:24,0:24:72.21:0,72,1908	0/0:29,0:29:84.26:0,84,2200	0/0:18,0:18:54.19:0,54,1633	0/0:34,0:34:99:0,99,2761	0/0:24,0:24:69.24:0,69,2019	1/1:0,16:16:45.15:1916,45,0	0/0:21,0:21:63.22:0,63,1830	0/0:24,0:24:72.23:0,72,2038	0/0:36,0:36:99:0,108,3073	0/0:22,0:22:66.23:0,66,1933	0/0:28,0:28:81.28:0,81,2353	0/0:7,0:7:21.06:0,21,564	0/0:19,0:19:57.16:0,57,1511	0/0:33,0:33:99:0,99,2776	0/0:24,0:24:72.25:0,72,2178	0/0:27,0:27:78.21:0,78,2018	1/1:12,18:30:62.95:2351,63,0	1/1:1,6:7:17.65:648,18,0	0/0:23,0:23:69.20:0,69,1886	0/0:31,0:31:87.30:0,87,2522	0/0:38,0:38:99:0,111,3294	0/0:3,0:3:9.03:0,9,272
chr10	34847855	.	AT	A	1426.31	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=11.762;DP=667;FS=15.790;HRun=1;HaplotypeScore=142.2339;InbreedingCoeff=0.9744;MQ=87.50;MQ0=0;MQRankSum=-11.723;QD=26.41;ReadPosRankSum=-0.441;VQSLOD=2.0137;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,147,2297	0/0:8,0:8:24.08:0,24,383	0/0:32,0:32:90.27:0,90,1374	0/0:17,0:17:45.15:0,45,697	0/0:40,0:40:99:0,120,1892	0/0:21,0:21:63.21:0,63,1006	0/0:20,0:20:60.20:0,60,959	0/0:27,0:27:81.26:0,81,1253	0/0:18,0:18:54.18:0,54,857	0/0:31,0:31:93.31:0,93,1466	0/0:25,0:25:75.24:0,75,1175	1/1:0,16:16:45.12:491,45,0	0/0:19,0:19:57.19:0,57,906	0/0:22,0:22:66.21:0,66,1020	0/0:34,0:34:99:0,102,1602	0/0:20,0:20:60.20:0,60,958	0/0:26,0:26:78.27:0,78,1240	0/0:7,0:7:21.04:0,21,308	0/0:18,0:18:54.18:0,54,863	0/0:32,0:32:96.31:0,96,1507	0/0:26,0:26:78.23:0,78,1192	0/0:25,0:25:75.21:0,75,1149	1/1:0,31:31:86.83:910,87,0	1/1:0,7:7:17.78:167,18,0	0/0:23,0:23:69.24:0,69,1102	0/0:30,0:30:90.29:0,90,1397	0/0:40,0:40:99:0,120,1862	0/0:3,0:3:9.03:0,9,144
chr10	34847892	.	A	AT	1482.29	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=10.552;DP=656;FS=13.107;HRun=3;HaplotypeScore=115.5834;InbreedingCoeff=0.9367;MQ=87.57;MQ0=0;MQRankSum=-10.489;QD=29.65;ReadPosRankSum=1.306;VQSLOD=2.0116;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,123,1476	0/0:6,0:6:18.06:0,18,216	0/0:24,0:25:65.85:0,66,740	0/0:25,0:25:63.14:0,63,724	0/0:41,0:41:99:0,120,1439	0/0:27,0:27:78.22:0,78,924	0/0:17,0:17:51.16:0,51,612	0/0:36,0:36:96.28:0,96,1142	0/0:20,0:20:60.17:0,60,708	0/0:30,0:30:87.26:0,87,1036	0/0:34,0:34:99:0,102,1200	1/1:1,10:11:30.06:390,30,0	0/0:19,0:19:57.17:0,57,684	0/0:15,0:15:39.12:0,39,468	0/0:26,0:26:75.23:0,75,900	0/0:16,0:16:45.14:0,45,540	0/0:23,0:23:69.16:0,69,801	0/0:8,0:8:21.06:0,21,252	0/0:18,0:18:48.13:0,48,567	0/0:30,0:30:84.26:0,84,1008	0/0:27,0:26:81.25:0,81,972	0/0:35,0:35:99:0,102,1224	1/1:7,29:36:84.28:1145,84,0	1/1:0,3:3:6.02:82,6,0	0/0:17,0:17:51.16:0,51,612	0/0:28,0:28:81.21:0,81,955	0/0:36,0:36:99:0,102,1187	0/0:3,0:3:9.03:0,9,108
chr10	34847940	.	G	GAA	1330.23	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.243;DP=686;FS=0.677;HRun=4;HaplotypeScore=100.7529;InbreedingCoeff=0.9545;MQ=84.81;MQ0=0;MQRankSum=-8.898;QD=27.71;ReadPosRankSum=-2.337;VQSLOD=2.0623;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,129,1703	0/0:9,0:9:24.08:0,24,320	0/0:30,0:30:67.89:0,68,827	0/0:24,0:24:29.28:0,29,469	0/0:35,0:35:96.27:0,96,1234	0/0:27,0:27:75.23:0,75,984	0/0:30,0:30:87.25:0,87,1114	0/0:42,0:42:99:0,114,1463	0/0:17,0:17:51.11:0,51,659	0/0:29,0:29:81.24:0,81,1043	0/0:31,0:31:90.27:0,90,1170	1/1:1,10:11:27.09:485,27,0	0/0:21,0:21:60.18:0,60,783	0/0:13,0:13:39.11:0,39,505	0/0:25,0:24:69.16:0,69,871	0/0:25,0:25:66.19:0,66,850	0/0:26,0:26:75.21:0,75,967	0/0:14,0:14:39.11:0,39,504	0/0:17,0:17:45.13:0,45,575	0/0:31,0:31:81.25:0,81,1064	0/0:28,0:28:81.25:0,81,1064	0/0:38,0:38:99:0,108,1379	1/1:14,20:34:59.94:873,60,0	1/1:0,3:3:6.02:108,6,0	0/0:17,0:17:48.14:0,48,620	0/0:25,0:25:69.22:0,69,904	0/0:33,0:33:90.28:0,90,1176	0/0:5,0:5:15.03:0,15,183
chr10	34847979	.	G	GA	71.24	PASS	AC=4;AF=0.074;AN=54;BaseQRankSum=4.214;DP=649;FS=0.000;HRun=1;HaplotypeScore=70.6276;InbreedingCoeff=0.8677;MQ=81.74;MQ0=0;MQRankSum=-2.830;QD=10.18;ReadPosRankSum=0.922;VQSLOD=1.3334;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:57:99:0,172,2392	0/0:10,0:10:30.10:0,30,420	0/0:19,0:19:49.88:0,50,654	0/0:23,0:23:59.40:0,59,831	0/0:34,0:34:99:0,102,1423	0/0:28,0:28:84.28:0,84,1173	0/0:35,0:35:99:0,105,1450	0/0:32,0:32:96.31:0,96,1328	0/0:16,0:16:48.16:0,48,669	0/0:28,0:28:84.27:0,84,1144	0/0:25,0:25:72.24:0,72,1007	./.	0/0:28,0:28:84.28:0,84,1173	0/0:27,0:27:78.26:0,78,1091	0/0:26,0:25:78.26:0,78,1089	0/0:27,0:27:78.25:0,78,1076	0/0:27,0:27:78.26:0,78,1091	0/0:15,0:15:45.13:0,45,611	0/0:16,0:16:48.16:0,48,672	0/0:29,0:29:85.53:0,86,1176	0/0:35,0:35:99:0,105,1464	0/0:32,0:32:96.32:0,96,1343	1/1:0,6:6:12.03:140,12,0	1/1:0,1:1:3.01:34,3,0	0/0:16,0:16:48.16:0,48,671	0/0:27,0:27:81.27:0,81,1131	0/0:24,0:24:72.24:0,72,1007	0/0:4,0:4:12.04:0,12,168
chr10	34847992	.	TTCCTGA	T	138.34	PASS	AC=4;AF=0.074;AN=54;BaseQRankSum=4.861;DP=643;FS=0.000;HRun=0;HaplotypeScore=135.5609;InbreedingCoeff=0.8668;MQ=85.59;MQ0=0;MQRankSum=-3.651;QD=19.76;ReadPosRankSum=0.584;VQSLOD=3.0692;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:58:99:0,175,6495	0/0:8,0:8:24.08:0,24,904	0/0:19,0:19:30.94:0,31,1688	0/0:24,0:24:54.25:0,54,1801	0/0:34,0:34:99:0,102,3698	0/0:23,0:23:69.22:0,69,2487	0/0:32,0:32:96.33:0,96,3525	0/0:29,0:29:87.29:0,87,2999	0/0:14,0:14:42.13:0,42,1493	0/0:26,0:26:78.27:0,78,2874	0/0:23,0:23:69.24:0,69,2534	./.	0/0:24,0:24:72.25:0,72,2704	0/0:27,0:27:78.27:0,78,2937	0/0:28,0:27:84.29:0,84,3098	0/0:28,0:28:81.28:0,81,3050	0/0:27,0:27:81.28:0,81,3008	0/0:16,0:16:45.15:0,45,1596	0/0:19,0:19:57.18:0,57,1965	0/0:26,0:26:78.26:0,78,2760	0/0:37,0:37:99:0,111,4121	0/0:32,0:32:96.33:0,96,3568	1/1:0,6:6:12.04:194,12,0	1/1:0,1:1:3.01:47,3,0	0/0:19,0:19:57.20:0,57,2123	0/0:28,0:28:84.29:0,84,2922	0/0:29,0:29:87.30:0,87,3213	0/0:4,0:4:12.04:0,12,452
chr10	34848003	.	CAGAT	C	37.89	PASS	AB=0.667;AC=2;AF=0.036;AN=56;BaseQRankSum=4.197;DP=620;FS=0.000;HRun=0;HaplotypeScore=108.6004;InbreedingCoeff=-0.0308;MQ=84.87;MQ0=0;MQRankSum=-2.772;QD=2.71;ReadPosRankSum=1.818;VQSLOD=1.8442;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:62,0:62:99:0,178,4665	0/0:10,0:10:30.09:0,30,780	0/0:19,0:19:57.19:0,57,1517	0/0:21,0:21:50.29:0,50,1342	0/0:29,0:29:81.25:0,81,2055	0/0:21,0:21:63.20:0,63,1701	0/0:33,0:33:99:0,99,2609	0/0:27,0:27:81.26:0,81,2126	0/0:12,0:12:33.11:0,33,923	0/0:24,0:24:60.19:0,60,1513	0/0:24,0:24:66.14:0,66,1472	0/0:1,2:3:3.01:0,3,77	0/0:25,0:25:75.26:0,75,2048	0/0:30,0:30:87.30:0,87,2432	0/0:27,0:26:81.28:0,81,2266	0/0:26,0:26:75.20:0,75,1829	0/0:22,0:22:66.21:0,66,1771	0/0:13,0:13:39.13:0,39,1091	0/0:18,0:18:48.15:0,48,1254	0/0:26,0:26:69.20:0,69,1720	0/0:34,0:34:99:0,102,2785	0/0:30,0:30:81.24:0,81,2040	0/1:6,6:12:58.51:103,0,59	0/1:1,1:2:17.82:23,0,18	0/0:20,0:20:54.17:0,54,1452	0/0:22,0:22:63.19:0,63,1587	0/0:24,0:24:69.24:0,69,1894	0/0:4,0:4:12.04:0,12,318
chr10	34848010	.	ATGAG	A	191.74	PASS	AB=0.667;AC=2;AF=0.036;AN=56;BaseQRankSum=4.157;DP=593;FS=0.000;HRun=0;HaplotypeScore=105.1591;InbreedingCoeff=-0.0268;MQ=87.59;MQ0=0;MQRankSum=-2.776;QD=13.70;ReadPosRankSum=1.589;VQSLOD=2.9601;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:59,0:59:99:0,175,4921	0/0:9,0:9:27.09:0,27,783	0/0:19,0:19:57.17:0,57,1514	0/0:23,0:23:57.43:0,57,1523	0/0:25,0:25:75.22:0,75,2099	0/0:20,0:20:60.21:0,60,1699	0/0:32,0:32:96.33:0,96,2754	0/0:28,0:28:84.29:0,84,2417	0/0:11,0:11:33.11:0,33,939	0/0:24,0:24:69.24:0,69,1979	0/0:17,0:17:48.16:0,48,1376	0/0:2,2:4:6:0,6,66	0/0:23,0:23:69.24:0,69,1991	0/0:30,0:30:90.31:0,90,2594	0/0:28,0:27:84.29:0,84,2364	0/0:25,0:25:72.25:0,72,2047	0/0:22,0:22:60.21:0,60,1739	0/0:14,0:14:42.14:0,42,1165	0/0:20,0:20:60.21:0,60,1720	0/0:20,0:20:57.20:0,57,1582	0/0:34,0:34:96.30:0,96,2710	0/0:23,0:23:69.24:0,69,1986	0/1:6,6:12:58.50:224,0,59	0/1:1,1:2:17.82:56,0,18	0/0:20,0:20:60.21:0,60,1688	0/0:21,0:21:63.22:0,63,1805	0/0:23,0:23:66.23:0,66,1873	0/0:5,0:5:15.05:0,15,435
chr10	34848018	.	T	TGTGCACACAGG	887.94	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=5.160;DP=606;FS=0.000;HRun=0;HaplotypeScore=194.8452;InbreedingCoeff=0.9016;MQ=87.02;MQ0=0;MQRankSum=-4.741;QD=34.15;ReadPosRankSum=-0.677;VQSLOD=3.0158;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:56:99:0,162,5047	0/0:11,0:11:33.09:0,33,993	0/0:20,0:20:57.17:0,57,1713	0/0:22,0:22:62.99:0,63,1620	0/0:25,0:25:74.04:0,74,2326	0/0:17,0:17:51.16:0,51,1621	0/0:34,0:34:99:0,99,3068	0/0:35,0:35:90.19:0,90,2087	0/0:11,0:11:33.09:0,33,971	0/0:25,0:25:72.25:0,72,2482	0/0:17,0:17:48.16:0,48,1692	1/1:4,2:6:8.98:221,9,0	0/0:23,0:23:66.21:0,66,2296	0/0:31,0:31:90.25:0,90,2867	0/0:26,0:25:75.23:0,75,2451	0/0:25,0:25:75.22:0,75,2450	0/0:24,0:24:69.15:0,69,2119	0/0:11,0:11:30.09:0,30,1003	0/0:22,0:22:57.02:0,57,1857	0/0:17,0:17:51.15:0,51,1587	0/0:32,0:32:96.25:0,96,3122	0/0:23,0:23:68.98:0,69,2230	1/1:9,5:15:17.98:642,18,0	1/1:1,1:5:3.01:149,3,0	0/0:21,0:21:63.15:0,63,1801	0/0:24,0:24:66.21:0,66,2166	0/0:23,0:23:66.19:0,66,2103	0/0:5,0:5:15.05:0,15,544
chr10	34848228	.	G	GT	2440.53	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=12.542;DP=702;FS=1.040;HRun=1;HaplotypeScore=78.5710;InbreedingCoeff=0.9997;MQ=84.14;MQ0=0;MQRankSum=-3.612;QD=35.37;ReadPosRankSum=1.336;VQSLOD=3.8579;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:90.27:0,90,1151	0/0:11,0:11:33.09:0,33,414	0/0:20,0:21:59.52:0,60,705	0/0:22,0:23:63.17:0,63,784	0/0:41,0:41:99:0,120,1520	0/0:23,0:23:69.22:0,69,895	0/0:21,0:21:63.19:0,63,802	0/0:35,0:35:99:0,102,1298	0/0:21,0:21:60.16:0,60,736	0/0:33,0:33:90.29:0,90,1157	0/0:32,0:32:93.28:0,93,1178	1/1:1,26:27:72.21:1055,72,0	0/0:14,0:14:42.12:0,42,530	0/0:27,0:27:75.23:0,75,958	0/0:16,0:16:48.16:0,48,623	0/0:24,0:24:72.23:0,72,932	0/0:25,0:25:75.20:0,75,954	0/0:15,0:15:42.14:0,42,544	0/0:28,0:28:78.24:0,78,997	0/0:37,0:37:99:0,105,1360	0/0:29,0:29:78.24:0,78,996	0/0:34,0:34:99:0,99,1283	1/1:1,26:28:71.67:990,72,0	1/1:1,13:14:36.12:539,36,0	0/0:24,0:24:72.23:0,72,934	0/0:18,0:18:54.18:0,54,701	0/0:39,0:38:99:0,114,1443	0/0:10,0:10:30.10:0,30,389
chr10	34848666	.	CTGA	C	520.29	PASS	AB=0.626;AC=3;AF=0.054;AN=56;BaseQRankSum=8.221;DP=578;FS=12.321;HRun=0;HaplotypeScore=101.2422;InbreedingCoeff=0.2462;MQ=88.28;MQ0=0;MQRankSum=-7.758;QD=13.01;ReadPosRankSum=2.216;VQSLOD=2.7512;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:90.29:0,90,2162	0/0:8,0:8:24.08:0,24,591	0/0:21,0:21:60.17:0,60,1382	0/0:24,0:25:67.09:0,67,1420	0/0:20,0:20:51.18:0,51,1231	0/0:22,0:22:66.23:0,66,1625	0/0:20,0:20:60.18:0,60,1373	0/0:30,0:30:87.29:0,87,2078	0/0:23,0:23:69.24:0,69,1701	0/0:29,0:29:87.28:0,87,2048	0/0:14,0:14:36.06:0,36,839	0/1:1,12:14:5.04:317,0,5	0/0:22,0:22:63.22:0,63,1545	0/0:28,0:28:84.29:0,84,2050	0/0:17,0:17:51.16:0,51,1208	0/0:23,0:23:69.22:0,69,1616	0/0:25,0:25:75.26:0,75,1848	0/0:12,0:12:36.12:0,36,884	0/0:28,0:28:84.26:0,84,1965	0/0:23,0:23:66.23:0,66,1584	0/0:26,0:26:78.27:0,78,1897	0/0:16,0:16:45.15:0,45,1100	0/1:3,11:14:4.07:214,0,4	0/1:9,3:12:39.18:89,0,39	0/0:17,0:17:51.18:0,51,1257	0/0:22,0:22:66.23:0,66,1595	0/0:28,0:27:84.29:0,84,2069	0/0:6,0:6:18.03:0,18,361
chr10	34848671	.	GTACATAATGGAGA	G	2293.63	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.473;DP=592;FS=4.443;HRun=0;HaplotypeScore=220.5422;InbreedingCoeff=0.9873;MQ=88.46;MQ0=0;MQRankSum=-9.333;QD=60.36;ReadPosRankSum=1.027;VQSLOD=2.8818;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,111,6741	0/0:8,0:8:24.08:0,24,1543	0/0:23,0:23:66.23:0,66,3368	0/0:26,0:26:69.11:0,69,3456	0/0:20,0:20:57.20:0,57,3500	0/0:23,0:23:69.24:0,69,4511	0/0:19,0:19:57.20:0,57,3600	0/0:31,0:31:90.31:0,90,5140	0/0:24,0:24:72.25:0,72,4513	0/0:28,0:28:78.26:0,78,5003	0/0:15,0:15:42.09:0,42,2638	1/1:1,12:14:42.12:1272,42,0	0/0:22,0:22:63.22:0,63,4152	0/0:28,0:28:84.29:0,84,5218	0/0:17,0:17:51.18:0,51,3280	0/0:21,0:21:63.22:0,63,3891	0/0:27,0:27:78.27:0,78,4965	0/0:12,0:12:33.11:0,33,2014	0/0:30,0:30:90.31:0,90,5365	0/0:27,0:27:81.28:0,81,5059	0/0:25,0:25:75.26:0,75,4670	0/0:15,0:15:45.15:0,45,2976	1/1:0,11:13:29.76:766,30,0	1/1:0,3:11:23.83:398,24,0	0/0:19,0:19:57.20:0,57,3782	0/0:22,0:22:66.23:0,66,4163	0/0:30,0:29:87.30:0,87,5533	0/0:4,0:4:12.04:0,12,702
chr10	34848968	.	T	TC	2055.38	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=12.197;DP=735;FS=0.506;HRun=4;HaplotypeScore=83.3113;InbreedingCoeff=0.9928;MQ=66.27;MQ0=2;MQRankSum=-6.553;QD=32.63;ReadPosRankSum=1.201;VQSLOD=4.1013;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,117,1313	0/0:12,0:12:36.09:0,36,398	0/0:21,0:17:46.57:0,47,536	0/0:29,0:28:56.99:0,57,680	0/0:35,0:35:96.27:0,96,1088	0/0:32,0:32:87.25:0,87,986	0/0:28,0:28:84.18:0,84,928	0/0:35,0:35:93.26:0,93,1047	0/0:34,0:34:99:0,99,1109	0/0:26,0:26:78.21:0,78,871	0/0:17,0:17:51.10:0,51,564	1/1:2,26:28:81.22:1076,81,0	0/0:23,0:23:69.20:0,69,782	0/0:27,0:27:81.21:0,81,898	0/0:31,0:31:90.26:0,90,1021	0/0:30,0:30:87.25:0,87,987	0/0:25,0:25:72.18:0,72,803	0/0:8,0:8:21.02:0,21,223	0/0:14,0:14:39.11:0,39,440	0/0:31,0:31:87.25:0,87,985	0/0:47,0:47:99:0,132,1466	0/0:29,0:29:78.22:0,78,884	1/1:4,16:20:48.06:608,48,0	1/1:1,14:15:39.12:515,39,0	0/0:22,0:21:60.17:0,60,679	0/0:28,0:28:72.19:0,72,809	0/0:41,0:41:99:0,120,1337	0/0:7,0:7:15.01:0,15,148
chr10	34849017	.	G	GA	1962.13	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=11.682;DP=734;FS=0.516;HRun=5;HaplotypeScore=79.6157;InbreedingCoeff=0.9887;MQ=77.20;MQ0=0;MQRankSum=-4.595;QD=28.44;ReadPosRankSum=1.885;VQSLOD=3.9617;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,138,1483	0/0:9,0:9:27.07:0,27,290	0/0:26,0:26:59.04:0,59,592	0/0:21,0:21:54.09:0,54,560	0/0:27,0:27:66.15:0,66,701	0/0:29,0:29:84.21:0,84,903	0/0:27,0:27:75.19:0,75,805	0/0:29,0:29:78.19:0,78,838	0/0:32,0:32:93.23:0,93,999	0/0:29,0:29:75.18:0,75,801	0/0:15,0:15:45.11:0,45,483	1/1:2,20:22:60.19:762,60,0	0/0:24,0:24:63.14:0,63,669	0/0:21,0:21:60.15:0,60,645	0/0:32,0:31:84.21:0,84,902	0/0:27,0:27:72.18:0,72,773	0/0:31,0:31:87.22:0,87,935	0/0:17,0:17:48.09:0,48,504	0/0:19,0:19:51.13:0,51,548	0/0:34,0:34:90.21:0,90,958	0/0:39,0:39:99:0,111,1173	0/0:35,0:35:99:0,99,1063	1/1:3,20:23:53.73:690,54,0	1/1:5,18:24:51.16:653,51,0	0/0:23,0:23:63.12:0,63,660	0/0:26,0:26:72.18:0,72,774	0/0:40,0:40:99:0,105,1119	0/0:4,0:4:12.03:0,12,129
chr10	34849624	.	G	GAA	1169.78	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=6.550;DP=549;FS=26.285;HRun=2;HaplotypeScore=87.0943;InbreedingCoeff=0.9943;MQ=79.57;MQ0=0;MQRankSum=-3.992;QD=46.79;ReadPosRankSum=1.524;VQSLOD=2.1681;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:66.18:0,66,929	0/0:6,0:6:18.06:0,18,264	0/0:13,0:13:39.13:0,39,556	0/0:14,0:14:39.13:0,39,547	0/0:25,0:25:66.21:0,66,951	0/0:22,0:22:60.19:0,60,864	0/0:15,0:15:39.13:0,39,574	0/0:30,0:30:81.26:0,81,1176	0/0:21,0:21:51.16:0,51,730	0/0:20,0:20:57.19:0,57,824	0/0:19,0:19:57.17:0,57,808	1/1:1,9:10:27.09:506,27,0	0/0:19,0:19:48.16:0,48,706	0/0:23,0:23:60.19:0,60,862	0/0:19,0:19:51.14:0,51,711	0/0:19,0:19:51.17:0,51,751	0/0:23,0:23:63.21:0,63,927	0/0:14,0:14:39.13:0,39,574	0/0:11,0:11:30.10:0,30,441	0/0:37,0:37:99:0,111,1634	0/0:18,0:18:54.16:0,54,774	0/0:38,0:38:99:0,114,1676	1/1:0,8:8:24.04:413,24,0	1/1:0,7:7:21.07:393,21,0	0/0:25,0:25:75.22:0,75,1063	0/0:24,0:24:72.24:0,72,1044	0/0:28,0:28:78.26:0,78,1148	0/0:15,0:15:45.15:0,45,663
chr10	34849683	.	GATAT	G	15397.33	PASS	AC=42;AF=0.808;AN=52;BaseQRankSum=0.887;DP=472;FS=0.000;HRun=0;HaplotypeScore=89.4753;InbreedingCoeff=0.7934;MQ=67.10;MQ0=1;MQRankSum=-2.181;QD=34.99;ReadPosRankSum=1.998;VQSLOD=4.6136;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,12:14:21.07:360,21,0	0/0:1,0:4:3.01:0,3,52	0/0:6,0:5:3.01:0,3,38	0/0:7,0:7:2.76:0,3,31	1/1:4,42:47:99:1622,99,0	1/1:2,14:17:33.11:542,33,0	1/1:3,17:20:39.13:669,39,0	1/1:10,31:41:93.27:1505,93,0	1/1:0,17:17:48.16:824,48,0	1/1:4,27:31:75.16:1227,75,0	1/1:5,18:23:42.14:721,42,0	./.	1/1:4,13:17:30.10:515,30,0	1/1:4,15:19:39.13:669,39,0	1/1:2,11:14:27.09:440,27,0	0/0:8,0:8:21.06:0,21,478	1/1:2,12:14:27.09:463,27,0	1/1:4,6:10:12.04:206,12,0	1/1:2,5:7:15.05:258,15,0	1/1:4,32:36:87.30:1477,87,0	1/1:4,9:13:16.30:260,16,0	1/1:8,13:21:30.10:513,30,0	0/0:2,0:2:3.01:0,3,48	./.	1/1:6,17:24:54.18:888,54,0	1/1:5,19:23:57.16:922,57,0	1/1:4,21:26:63.21:1058,63,0	1/1:0,5:5:15.05:258,15,0
chr10	34849715	.	TC	T	276.01	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=4.642;DP=517;FS=12.588;HRun=1;HaplotypeScore=110.6123;InbreedingCoeff=0.8674;MQ=73.99;MQ0=1;MQRankSum=-3.048;QD=23.00;ReadPosRankSum=-2.523;VQSLOD=2.0793;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:42.12:0,42,642	0/0:3,0:3:6.02:0,6,95	0/0:14,0:14:41.16:0,41,576	0/0:6,0:6:18.03:0,18,261	0/0:40,0:40:99:0,111,1675	0/0:16,0:16:42.13:0,42,645	0/0:16,0:16:42.12:0,42,624	0/0:33,0:33:99:0,99,1447	0/0:29,0:29:87.30:0,87,1387	0/0:37,0:37:99:0,105,1542	0/0:25,0:25:75.22:0,75,1145	1/1:0,4:4:9.03:125,9,0	0/0:23,0:23:69.22:0,69,1056	0/0:18,0:18:51.16:0,51,777	0/0:19,0:19:54.09:0,54,783	0/0:10,0:10:30.10:0,30,477	0/0:16,0:16:42.10:0,42,617	0/0:9,0:9:24.07:0,24,356	0/0:14,0:14:39.13:0,39,612	0/0:41,0:41:99:0,123,1934	0/0:9,0:9:24.01:0,24,331	0/0:15,0:15:42.12:0,42,619	1/1:1,5:6:18.05:233,18,0	1/1:0,2:2:3.01:42,3,0	0/0:25,0:25:75.24:0,75,1169	0/0:28,0:27:81.23:0,81,1238	0/0:31,0:31:90.21:0,90,1357	0/0:11,0:11:30.10:0,30,478
chr10	34849847	.	TG	T	1275.30	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=10.398;DP=621;FS=42.614;HRun=6;HaplotypeScore=66.7075;InbreedingCoeff=0.9790;MQ=89.41;MQ0=0;MQRankSum=-3.242;QD=26.57;ReadPosRankSum=2.576;VQSLOD=1.0385;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:69.22:0,69,908	0/0:4,0:4:9.01:0,9,102	0/0:26,1:27:74.99:0,75,903	0/0:24,0:24:49.40:0,49,619	0/0:27,0:27:75.23:0,75,967	0/0:15,0:15:39.12:0,39,499	0/0:29,0:29:81.26:0,81,1062	0/0:42,0:42:99:0,111,1404	0/0:24,0:24:66.21:0,66,866	0/0:23,0:23:54.12:0,54,675	0/0:20,0:20:57.19:0,57,749	1/1:0,20:20:54.14:580,54,0	0/0:19,0:19:54.18:0,54,706	0/0:20,0:20:57.19:0,57,749	0/0:22,0:22:54.11:0,54,659	0/0:18,0:18:51.16:0,51,666	0/0:20,0:20:57.15:0,57,718	0/0:14,0:14:30.05:0,30,375	0/0:14,0:14:33.09:0,33,416	0/0:39,0:39:99:0,111,1450	0/0:23,0:23:66.21:0,66,866	0/0:22,0:22:66.21:0,66,868	1/1:0,10:10:30.08:322,30,0	1/1:2,16:18:48.12:516,48,0	0/0:15,0:15:39.13:0,39,511	0/0:33,0:33:90.26:0,90,1152	0/0:34,0:34:99:0,99,1299	0/0:19,0:19:57.06:0,57,689
chr10	34851305	.	CAA	C	796.54	PASS	AB=0.763;AC=33;AF=0.868;AN=38;BaseQRankSum=-3.152;DP=144;FS=1.868;HRun=2;HaplotypeScore=31.6757;InbreedingCoeff=0.2493;MQ=70.05;MQ0=18;MQRankSum=-2.040;QD=7.18;ReadPosRankSum=0.185;VQSLOD=0.1891;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,5:10:6.22:53,6,0	./.	0/0:21,0:4:8.70:0,9,99	0/1:23,0:8:2.09:2,0,24	./.	0/1:2,1:3:0:0,0,0	1/1:8,0:8:8.94:82,9,0	1/1:4,5:8:23.99:258,24,0	1/1:0,8:8:3:34,3,0	1/1:1,1:1:3.01:39,3,0	./.	./.	1/1:3,1:4:2.64:44,3,0	1/1:3,0:3:8.60:81,9,0	1/1:4,3:7:5.69:88,6,0	1/1:2,2:2:2.22:7,2,0	1/1:0,3:2:3.01:36,3,0	1/1:0,0:1:2.94:18,3,0	1/1:3,1:1:3.01:31,3,0	./.	1/1:6,1:7:2.99:24,3,0	0/1:1,6:6:0:0,0,0	./.	./.	./.	1/1:0,2:2:6.02:73,6,0	1/1:0,3:3:3.45:23,3,0	./.
chr10	34851417	.	TCTCTCTCC	T	832.01	PASS	AB=1.000;AC=27;AF=0.675;AN=40;BaseQRankSum=-2.850;DP=176;FS=19.976;HRun=0;HaplotypeScore=27.1125;InbreedingCoeff=0.3123;MQ=27.10;MQ0=45;MQRankSum=1.717;QD=8.95;ReadPosRankSum=1.571;VQSLOD=0.0560;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:6:0.47:0,0,1	./.	./.	./.	./.	1/1:10,0:8:5.98:79,6,0	0/0:16,0:13:1.18:0,1,2	1/1:11,7:11:17.92:205,18,0	./.	1/1:7,0:4:2.76:65,3,0	1/1:4,0:2:5.93:62,6,0	./.	1/1:4,0:2:3.01:43,3,0	1/1:4,0:3:0.47:1,0,0	1/1:4,0:2:3.01:44,3,0	1/1:2,0:1:2.92:17,3,0	0/0:6,0:3:4.50:0,4,22	0/0:8,0:5:6:0,6,56	0/1:15,0:6:29.23:45,0,29	1/1:3,0:2:3.01:44,3,0	0/0:17,1:10:0.47:0,0,2	1/1:4,0:2:3.01:43,3,0	./.	./.	1/1:5,0:3:6.02:86,6,0	1/1:6,0:2:3.01:58,3,0	1/1:7,0:5:12:151,12,0	0/0:4,0:2:2.97:0,3,20
chr10	34851435	.	TCC	T	1574.25	PASS	AB=0.904;AC=34;AF=0.680;AN=50;BaseQRankSum=-1.074;DP=254;FS=0.000;HRun=3;HaplotypeScore=42.1316;InbreedingCoeff=0.0582;MQ=37.41;MQ0=35;MQRankSum=-0.393;QD=7.03;ReadPosRankSum=2.296;VQSLOD=0.0543;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:6:0.47:0,0,1	1/1:3,0:2:5.63:29,6,0	./.	./.	0/0:10,0:8:0.04:0,0,11	1/1:7,4:9:9.83:121,10,0	0/1:15,3:15:27.32:27,0,29	1/1:22,0:15:1.29:101,1,0	1/1:5,0:3:5.81:46,6,0	1/1:5,7:9:10.95:188,11,0	1/1:2,4:6:8.96:109,9,0	1/1:11,0:8:1.25:3,1,0	1/1:4,2:4:6.01:73,6,0	0/0:3,0:2:3:0,3,29	0/1:7,2:7:32.87:89,0,33	1/1:0,4:3:6.02:90,6,0	0/1:10,0:7:0.12:20,0,0	0/1:11,0:9:0.40:0,0,2	0/1:12,0:7:20.25:20,0,47	1/1:4,2:5:9.02:102,9,0	0/1:16,2:12:3.79:22,0,4	1/1:4,8:11:11.68:146,12,0	./.	1/1:13,0:9:5.94:41,6,0	1/1:7,5:10:18.32:197,18,0	0/1:11,1:9:0.80:68,0,1	0/1:7,4:10:12.74:203,0,13	0/0:5,0:3:0.28:0,0,1
chr10	34851466	.	C	CTG	288.23	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=5.080;DP=388;FS=0.680;HRun=0;HaplotypeScore=80.9507;InbreedingCoeff=0.6474;MQ=51.03;MQ0=12;MQRankSum=1.242;QD=3.95;ReadPosRankSum=2.127;VQSLOD=1.9256;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,0:8:1.25:3,1,0	1/1:4,0:3:5.95:51,6,0	0/0:20,0:8:20.73:0,21,175	0/0:21,0:11:27.96:0,28,260	1/1:19,0:19:23.14:82,23,0	0/0:13,0:13:17.07:0,17,119	0/1:16,0:14:11.49:11,0,62	0/0:20,0:20:27.61:0,28,207	1/1:1,11:13:5.75:62,6,0	0/0:19,0:18:36.25:0,36,204	0/0:10,0:10:16.38:0,16,102	0/0:10,0:9:2.88:0,3,15	0/0:9,0:8:12.39:0,12,80	0/0:7,0:7:14.85:0,15,122	0/0:10,0:9:4.13:0,4,109	0/0:9,0:8:18.91:0,19,110	1/1:13,0:12:13.58:226,14,0	0/0:16,0:15:25.04:0,25,173	0/0:10,0:10:7.09:0,7,57	0/0:14,0:14:23.06:0,23,173	0/0:20,0:18:18.35:0,18,137	0/0:21,0:21:15.43:0,15,186	0/0:5,0:5:5.86:0,6,35	0/0:14,0:12:7.05:0,7,34	0/0:18,0:18:18.98:0,19,153	0/0:23,0:22:41.45:0,41,283	0/0:19,0:19:28.64:0,29,243	0/0:7,0:7:11.90:0,12,96
chr10	34851468	.	C	CTG	5312.42	PASS	AB=1.000;AC=49;AF=0.875;AN=56;BaseQRankSum=-1.124;DP=397;FS=2.527;HRun=0;HaplotypeScore=71.3873;InbreedingCoeff=0.6656;MQ=53.43;MQ0=10;MQRankSum=-0.092;QD=15.40;ReadPosRankSum=1.829;VQSLOD=4.5405;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:8:5.92:0,6,41	1/1:5,0:4:8.94:75,9,0	0/0:21,0:9:26.84:0,27,227	0/0:23,0:13:17.06:0,17,252	1/1:2,0:21:23.78:87,24,0	1/1:14,0:14:23.99:244,24,0	1/1:15,1:15:11.18:137,11,0	1/1:19,0:19:25.42:304,25,0	1/1:14,0:14:8.50:84,8,0	1/1:16,1:17:33.33:488,33,0	1/1:10,0:10:21:203,21,0	1/1:10,0:9:2.94:18,3,0	1/1:8,0:8:20.87:207,21,0	1/1:9,0:9:7.38:134,7,0	1/1:12,0:11:14.95:227,15,0	1/1:9,0:8:21:213,21,0	1/1:14,0:13:26.88:255,27,0	1/1:15,0:14:27.08:199,27,0	1/1:11,0:11:11.72:198,12,0	1/1:15,0:15:30.79:342,31,0	1/1:19,0:18:24.73:223,25,0	1/1:19,2:21:38.63:390,39,0	1/1:5,0:5:6:56,6,0	0/1:14,0:12:6.70:58,0,7	1/1:17,1:18:35.95:395,36,0	1/1:2,20:23:46.46:373,46,0	1/1:19,0:19:34.70:330,35,0	1/1:7,0:7:11.50:72,11,0
chr10	34851471	.	T	TGA	858.57	PASS	AB=0.970;AC=31;AF=0.554;AN=56;BaseQRankSum=4.247;DP=392;FS=0.000;HRun=0;HaplotypeScore=81.0113;InbreedingCoeff=-0.1947;MQ=54.25;MQ0=9;MQRankSum=1.692;QD=2.69;ReadPosRankSum=3.151;VQSLOD=1.3401;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:8:3.01:0,3,44	1/1:5,0:4:2.96:10,3,0	0/0:24,0:10:27.09:0,27,405	0/0:23,0:13:7.61:0,8,414	0/1:20,0:20:4.13:33,0,4	1/1:13,0:13:4.46:45,4,0	0/1:16,0:15:22.12:22,0,41	0/1:20,0:20:10.25:10,0,97	0/1:14,0:14:10.40:27,0,10	0/1:17,0:17:17.29:97,0,17	1/1:9,0:9:6.63:42,7,0	1/1:1,7:9:3.01:36,3,0	1/1:8,0:8:5.81:48,6,0	0/0:11,0:11:7.28:0,7,74	0/1:11,0:10:47.41:57,0,47	1/1:10,0:9:5.36:38,5,0	0/1:11,0:11:16.21:35,0,16	0/1:15,0:15:9.91:10,0,61	0/1:10,0:10:45.99:46,0,61	0/1:14,0:14:34.17:61,0,34	0/1:18,0:18:13.80:23,0,14	1/1:20,0:20:3.54:65,4,0	1/1:0,5:5:6.02:106,6,0	0/1:2,10:11:1.38:95,0,1	0/1:19,0:19:15.08:85,0,15	0/1:23,0:23:19.76:20,0,24	0/1:20,0:20:6.59:7,0,60	0/0:7,0:7:5.18:0,5,34
chr10	34851708	.	C	CTCTT	31080.23	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-11.641;DP=691;FS=5.796;HRun=0;HaplotypeScore=144.8086;InbreedingCoeff=0.9976;MQ=76.28;MQ0=0;MQRankSum=-10.655;QD=64.89;ReadPosRankSum=-0.520;VQSLOD=6.6951;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:81.28:0,81,1485	0/0:6,0:5:15.05:0,15,276	0/0:19,0:19:51.17:0,51,916	0/0:17,0:17:38.60:0,39,611	0/0:22,0:22:57.20:0,57,1036	1/1:4,28:32:87.17:2076,87,0	1/1:5,28:34:99:2381,99,0	1/1:8,20:32:87.26:2036,87,0	0/0:22,0:22:63.18:0,63,1112	1/1:2,31:34:99:2641,102,0	1/1:3,16:19:51.09:1174,51,0	0/0:27,0:27:81.26:0,81,1472	1/1:3,30:35:96.33:2496,96,0	1/1:7,24:31:69.24:1797,69,0	1/1:5,18:23:63.04:1439,63,0	1/1:1,21:22:57.20:1519,57,0	0/0:23,0:23:66.23:0,66,1214	1/1:3,22:25:66.18:1675,66,0	1/1:11,11:22:54.18:1318,54,0	1/1:6,10:17:51.01:1031,51,0	1/1:4,21:25:60.04:1420,60,0	1/1:5,22:31:77.97:1620,78,0	0/0:17,0:17:48.16:0,48,895	0/0:31,0:31:93.31:0,93,1694	1/1:3,14:19:45.11:1076,45,0	1/1:5,24:30:84.27:2085,84,0	1/1:5,31:36:96.24:2436,96,0	1/1:1,10:11:33.11:858,33,0
chr10	34853256	.	T	TG	3072.59	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=12.615;DP=660;FS=0.000;HRun=2;HaplotypeScore=70.6201;InbreedingCoeff=0.9943;MQ=78.10;MQ0=0;MQRankSum=-1.823;QD=38.89;ReadPosRankSum=2.820;VQSLOD=4.1039;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:87.27:0,87,1076	0/0:14,0:14:42.12:0,42,507	0/0:25,0:25:48.14:0,48,662	0/0:16,0:16:39.04:0,39,447	0/0:25,0:25:72.23:0,72,893	0/0:28,0:28:84.26:0,84,1041	0/0:20,0:20:60.19:0,60,744	0/0:25,0:24:72.22:0,72,882	0/0:29,0:29:87.27:0,87,1078	0/0:30,0:29:87.27:0,87,1079	0/0:27,0:27:78.25:0,78,967	1/1:1,27:28:84.28:1209,84,0	0/0:25,0:25:69.22:0,69,855	0/0:25,0:25:75.24:0,75,930	0/0:25,0:25:69.22:0,69,855	0/0:33,0:33:99:0,99,1215	0/0:14,0:14:42.13:0,42,521	0/0:14,0:14:36.11:0,36,445	0/0:20,0:20:54.15:0,54,655	0/0:29,0:29:84.25:0,84,1029	0/0:25,0:25:72.18:0,72,875	0/0:21,0:21:60.18:0,60,731	1/1:2,27:29:81.27:1166,81,0	1/1:0,22:22:60.16:841,60,0	0/0:24,0:24:69.22:0,69,856	0/0:22,0:22:63.20:0,63,781	0/0:28,0:28:84.23:0,84,1014	0/0:6,0:6:15.05:0,15,186
chr10	34853327	.	AAC	A	2167.37	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.767;DP=647;FS=0.514;HRun=0;HaplotypeScore=93.1355;InbreedingCoeff=0.9980;MQ=83.84;MQ0=0;MQRankSum=-4.423;QD=35.53;ReadPosRankSum=0.576;VQSLOD=5.6542;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:69.24:0,69,1247	0/0:14,0:14:42.09:0,42,694	0/0:29,0:29:25.40:0,25,1036	0/0:21,0:21:44.29:0,44,774	0/0:23,0:23:69.22:0,69,1233	0/0:24,0:24:66.17:0,66,1116	0/0:24,0:24:69.22:0,69,1218	0/0:33,0:33:93.31:0,93,1678	0/0:19,0:19:51.16:0,51,905	0/0:30,0:30:84.27:0,84,1480	0/0:28,0:28:72.25:0,72,1309	1/1:4,18:22:63.20:883,63,0	0/0:30,0:30:84.29:0,84,1528	0/0:22,0:22:63.22:0,63,1154	0/0:27,0:27:81.28:0,81,1452	0/0:26,0:26:72.23:0,72,1289	0/0:22,0:22:66.23:0,66,1200	0/0:16,0:16:42.14:0,42,768	0/0:18,0:18:54.18:0,54,963	0/0:25,0:25:72.23:0,72,1270	0/0:22,0:22:60.17:0,60,1010	0/0:23,0:23:57.18:0,57,1014	1/1:6,19:25:63.20:870,63,0	1/1:2,12:14:39.13:558,39,0	0/0:26,0:26:69.22:0,69,1225	0/0:23,0:23:69.24:0,69,1249	0/0:30,0:30:90.31:0,90,1640	0/0:8,0:8:21.07:0,21,384
chr10	34853663	.	C	CTTT	3938.26	PASS	AB=0.941;AC=41;AF=0.732;AN=56;BaseQRankSum=5.087;DP=490;FS=0.000;HRun=12;HaplotypeScore=86.7412;InbreedingCoeff=0.5870;MQ=66.36;MQ0=2;MQRankSum=-2.461;QD=9.51;ReadPosRankSum=-0.847;VQSLOD=0.0935;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,0:26:33.24:233,33,0	0/0:9,0:9:24.03:0,24,260	0/1:25,0:13:16.36:21,0,16	0/1:21,0:19:5.27:5,0,71	0/0:23,0:27:4.24:0,4,241	1/1:6,0:18:25.15:185,25,0	1/1:2,1:11:23.95:231,24,0	1/1:11,0:27:32.32:262,32,0	0/0:12,0:13:19.33:0,19,208	1/1:6,1:18:22.24:227,22,0	1/1:8,0:28:39.77:269,40,0	0/1:7,0:7:0:0,0,0	1/1:5,1:14:23.91:212,24,0	1/1:7,0:19:35.66:276,36,0	1/1:5,0:14:16.18:115,16,0	1/1:3,0:9:5.96:44,6,0	0/0:27,0:26:66.03:0,66,728	1/1:5,0:15:32.54:274,33,0	1/1:5,0:13:19.19:172,19,0	1/1:8,1:31:56.78:483,57,0	1/1:5,0:13:23.40:184,23,0	1/1:2,0:20:29.36:207,29,0	0/1:10,0:10:0:0,0,0	0/1:7,0:7:0:0,0,0	1/1:2,0:18:26.47:188,26,0	0/1:8,0:20:8.97:121,0,9	1/1:4,1:23:23.90:227,24,0	0/1:3,0:3:0:0,0,0
chr10	34853874	.	C	CA	1461.24	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.962;DP=504;FS=0.000;HRun=6;HaplotypeScore=54.2146;InbreedingCoeff=0.9954;MQ=72.69;MQ0=0;MQRankSum=-3.482;QD=28.65;ReadPosRankSum=-0.276;VQSLOD=3.8571;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:48.10:0,48,489	0/0:6,0:6:18.04:0,18,184	0/0:10,0:10:27.06:0,27,271	0/0:22,0:22:48.06:0,48,479	0/0:29,0:29:72.16:0,72,734	0/0:25,0:25:66.15:0,66,673	0/0:16,0:16:39.08:0,39,398	0/0:24,0:24:66.14:0,66,667	0/0:19,0:19:57.13:0,57,582	0/0:25,0:25:69.16:0,69,704	0/0:17,0:17:45.07:0,45,446	1/1:3,13:16:39.12:490,39,0	0/0:15,0:15:39.09:0,39,398	0/0:16,0:16:45.09:0,45,452	0/0:20,0:20:57.13:0,57,582	0/0:10,0:10:27.06:0,27,275	0/0:24,0:24:60.13:0,60,612	0/0:16,0:16:42.06:0,42,417	0/0:22,0:20:54.12:0,54,546	0/0:31,0:31:78.17:0,78,795	0/0:16,0:16:33.07:0,33,337	0/0:11,0:11:30.05:0,30,299	1/1:3,10:13:30.10:377,30,0	1/1:1,21:22:60.15:736,60,0	0/0:16,0:16:48.11:0,48,490	0/0:21,0:21:60.13:0,60,612	0/0:15,0:15:39.09:0,39,398	0/0:10,0:10:27.06:0,27,275
chr10	34855472	.	T	TC	2046.50	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=12.207;DP=667;FS=14.763;HRun=1;HaplotypeScore=127.9459;InbreedingCoeff=0.9872;MQ=74.47;MQ0=0;MQRankSum=-10.786;QD=25.58;ReadPosRankSum=-3.276;VQSLOD=1.7324;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,99,1266	0/0:8,0:8:22.70:0,23,142	0/0:17,0:17:45.14:0,45,567	0/0:18,0:18:33.21:0,33,421	0/0:32,0:32:92.14:0,92,634	0/0:28,0:28:76.50:0,77,990	0/0:25,0:25:75.21:0,75,944	0/0:34,0:34:96.30:0,96,1225	0/0:22,0:22:52.89:0,53,362	0/0:29,0:29:81.25:0,81,1024	0/0:29,0:29:87.27:0,87,1114	1/1:5,26:31:75.17:1022,75,0	0/0:21,0:21:63.17:0,63,784	0/0:24,0:24:72.22:0,72,910	0/0:24,0:24:72.23:0,72,921	0/0:29,0:29:84.27:0,84,1090	0/0:21,0:21:54.68:0,55,405	0/0:16,0:16:45.15:0,45,583	0/0:20,0:20:57.11:0,57,703	0/0:21,0:21:60.20:0,60,779	0/0:21,0:21:63.18:0,63,790	0/0:22,0:22:63.20:0,63,809	1/1:2,26:28:63.06:848,63,0	1/1:1,20:21:23.72:320,24,0	0/0:19,0:19:57.16:0,57,724	0/0:39,0:39:99:0,117,1482	0/0:28,0:27:81.23:0,81,1019	0/0:4,0:4:12.04:0,12,156
chr10	34855476	.	T	TA	3211.13	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=4.399;DP=661;FS=16.413;HRun=8;HaplotypeScore=122.5830;InbreedingCoeff=0.9365;MQ=74.60;MQ0=0;MQRankSum=-5.231;QD=18.04;ReadPosRankSum=-0.290;VQSLOD=2.2837;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:87.02:0,87,790	1/1:1,8:9:21.06:242,21,0	0/0:17,0:17:44.52:0,45,393	0/1:18,0:18:1.84:2,0,209	1/1:6,27:33:81.24:935,81,0	0/0:30,0:30:49.43:0,49,686	0/0:24,0:24:63.01:0,63,571	0/0:34,0:34:87:0,87,781	1/1:1,20:21:49.03:554,49,0	0/0:30,0:30:80.83:0,81,723	0/0:30,0:30:81.03:0,81,737	1/1:29,0:29:20.51:483,21,0	0/0:22,0:22:48.01:0,48,439	0/0:22,0:22:60.03:0,60,549	0/0:23,0:23:60.02:0,60,549	0/0:28,0:28:78.02:0,78,705	1/1:4,16:20:45.13:519,45,0	0/0:17,0:17:25.08:0,25,353	0/0:18,0:18:44.80:0,45,390	0/0:21,0:21:59.97:0,60,536	0/0:22,0:22:53.99:0,54,482	0/0:23,0:23:38.44:0,38,520	1/1:30,0:30:56.93:473,57,0	1/1:18,0:18:24.53:200,25,0	0/0:19,0:19:51.03:0,51,467	0/0:39,0:39:96.03:0,96,875	0/0:26,0:25:63.03:0,63,577	0/0:5,0:5:12.01:0,12,110
chr10	34855839	.	C	CA	2547.98	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-9.767;DP=612;FS=0.000;HRun=4;HaplotypeScore=67.4264;InbreedingCoeff=0.9940;MQ=83.67;MQ0=0;MQRankSum=-0.728;QD=32.25;ReadPosRankSum=3.198;VQSLOD=4.1856;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,102,1139	1/1:2,10:12:30.10:410,30,0	0/0:23,0:23:54.09:0,54,574	0/0:18,0:18:20.18:0,20,385	1/1:0,27:27:72.24:985,72,0	0/0:21,0:21:60.16:0,60,672	0/0:25,0:25:69.19:0,69,775	0/0:29,0:29:87.03:0,87,957	1/1:1,18:19:45.15:616,45,0	0/0:30,0:30:81.21:0,81,902	0/0:23,0:23:63.18:0,63,715	0/0:26,0:26:72.15:0,72,801	0/0:15,0:15:39.11:0,39,442	0/0:19,0:19:48.12:0,48,531	0/0:18,0:18:45.11:0,45,501	0/0:22,0:22:48.13:0,48,544	1/1:2,19:21:51.17:698,51,0	0/0:13,0:13:39.11:0,39,442	0/0:16,0:16:42.11:0,42,468	0/0:20,0:20:51.12:0,51,560	0/0:19,0:19:54.15:0,54,612	0/0:25,0:25:60.15:0,60,671	0/0:24,0:24:54.15:0,54,610	0/0:30,0:30:68.49:0,68,779	0/0:29,0:29:78.21:0,78,876	0/0:26,0:26:72.21:0,72,817	0/0:17,0:17:48.12:0,48,533	0/0:5,0:5:15.04:0,15,170
chr10	34855895	.	T	TTCCCC	3832.31	PASS	AB=0.590;AC=5;AF=0.089;AN=56;BaseQRankSum=-0.918;DP=612;FS=5.820;HRun=0;HaplotypeScore=117.3126;InbreedingCoeff=0.7684;MQ=69.71;MQ0=0;MQRankSum=-6.910;QD=63.87;ReadPosRankSum=2.739;VQSLOD=4.3650;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:72.25:0,72,1546	0/0:8,0:8:21.07:0,21,424	0/0:13,0:13:35.91:0,36,671	0/0:11,0:11:24.04:0,24,423	0/0:33,0:33:96.32:0,96,2028	0/0:29,0:29:78.26:0,78,1654	0/0:20,0:20:54.19:0,54,1157	0/0:35,0:35:99:0,102,2033	0/0:23,0:23:66.23:0,66,1408	0/0:23,0:23:66.23:0,66,1419	0/0:24,0:24:66.23:0,66,1432	1/1:1,9:11:27.09:838,27,0	0/0:33,0:33:96.32:0,96,2043	0/0:18,0:18:51.18:0,51,1107	0/0:19,0:19:51.18:0,51,1107	0/0:21,0:21:63.22:0,63,1368	0/0:21,0:21:60.21:0,60,1302	0/0:10,0:10:30.10:0,30,644	0/0:25,0:25:66.21:0,66,1337	0/0:34,0:34:99:0,99,2108	0/0:16,0:16:48.15:0,48,984	0/0:25,0:25:72.25:0,72,1531	1/1:4,20:25:60.21:1878,60,0	0/1:7,14:23:23.06:1117,0,23	0/0:29,0:29:87.28:0,87,1829	0/0:26,0:26:75.26:0,75,1616	0/0:26,0:26:78.27:0,78,1694	0/0:4,0:4:12.04:0,12,261
chr10	34856041	.	TCA	T	5100.31	PASS	AB=0.929;AC=41;AF=0.732;AN=56;BaseQRankSum=1.416;DP=528;FS=2.684;HRun=0;HaplotypeScore=145.5870;InbreedingCoeff=0.8112;MQ=50.96;MQ0=10;MQRankSum=-0.983;QD=14.37;ReadPosRankSum=1.115;VQSLOD=4.9680;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:20:19.56:184,20,0	0/0:9,0:9:11.40:0,11,73	0/0:40,0:15:11.96:0,12,121	0/0:27,0:10:8.97:0,9,85	0/0:31,0:31:52.13:0,52,553	1/1:9,4:13:8.14:76,8,0	1/1:11,6:17:22.46:274,22,0	1/1:13,4:16:20.97:215,21,0	0/0:20,0:19:27.70:0,28,211	1/1:14,7:20:30.11:300,30,0	1/1:16,7:23:26.81:257,27,0	1/1:15,0:15:2.57:30,3,0	1/1:10,13:23:53.66:623,54,0	1/1:8,6:13:21.06:242,21,0	1/1:12,2:14:26.92:301,27,0	1/1:9,9:18:29.44:408,29,0	0/0:27,0:27:44.38:0,44,479	1/1:9,6:15:29.95:310,30,0	1/1:16,5:21:6.93:185,7,0	1/1:8,7:15:26.29:293,26,0	1/1:6,15:19:3.01:37,3,0	1/1:10,9:19:36.72:401,37,0	0/0:16,2:19:0:0,0,0	0/1:12,1:12:0:0,0,0	1/1:12,12:24:30.68:328,31,0	1/1:9,5:14:29.27:305,29,0	1/1:9,3:12:20.33:223,20,0	1/1:4,1:5:9.03:108,9,0
chr10	34856051	.	ACACACACG	A	7595.62	PASS	AB=1.000;AC=44;AF=0.815;AN=54;BaseQRankSum=5.056;DP=534;FS=1.349;HRun=0;HaplotypeScore=193.2969;InbreedingCoeff=0.2316;MQ=45.09;MQ0=14;MQRankSum=-0.202;QD=16.09;ReadPosRankSum=0.438;VQSLOD=4.2610;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:19:20.14:141,20,0	0/1:8,0:8:27.88:38,0,28	0/0:26,0:7:3:0,3,29	0/0:18,0:4:2.97:0,3,21	0/1:31,0:31:99:104,0,266	1/1:16,0:15:23.77:308,24,0	1/1:17,0:17:25.41:160,25,0	1/1:13,0:12:5.82:96,6,0	0/1:22,0:21:63.16:99,0,63	1/1:23,0:22:43.53:515,44,0	1/1:11,12:23:20.61:402,21,0	0/1:17,0:17:6.42:6,0,20	1/1:25,0:24:58.58:764,59,0	1/1:16,0:15:29.45:446,29,0	1/1:18,0:18:38.24:422,38,0	1/1:19,0:19:43.94:700,44,0	0/1:30,0:29:62.43:62,0,178	1/1:14,0:14:32.16:354,32,0	1/1:17,0:16:24.72:266,25,0	1/1:14,0:14:31.53:404,32,0	1/1:26,0:24:14.16:118,14,0	1/1:20,0:20:44.45:701,44,0	./.	0/1:11,0:12:0.01:0,0,0	1/1:29,0:27:44.07:516,44,0	1/1:19,0:19:35.24:358,35,0	1/1:18,0:18:44.47:461,44,0	1/1:4,0:4:9.03:153,9,0
chr10	34856057	.	ACG	A	4567.93	PASS	AB=1.000;AC=45;AF=0.833;AN=54;BaseQRankSum=4.256;DP=515;FS=9.121;HRun=0;HaplotypeScore=166.5142;InbreedingCoeff=0.2830;MQ=45.87;MQ0=15;MQRankSum=0.647;QD=9.60;ReadPosRankSum=-0.817;VQSLOD=4.0414;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:19:20.24:142,20,0	0/1:8,0:8:17.26:18,0,17	0/0:10,0:5:3:0,3,29	0/0:12,0:3:2.97:0,3,21	0/1:34,0:34:99:103,0,256	1/1:16,0:15:32.38:229,32,0	1/1:16,0:16:25.53:133,26,0	1/1:13,0:12:19.91:146,20,0	0/1:22,0:21:11.69:12,0,78	1/1:22,0:21:52.10:329,52,0	1/1:22,0:22:20.17:122,20,0	1/1:14,2:16:5.57:99,6,0	1/1:22,0:21:57.77:330,58,0	1/1:16,0:15:38.16:255,38,0	1/1:21,0:21:49.68:346,50,0	1/1:21,0:21:49.06:296,49,0	0/1:27,0:26:69.59:70,0,212	1/1:14,0:14:22.28:165,22,0	1/1:16,0:14:28.90:194,29,0	1/1:17,0:16:37.27:222,37,0	1/1:28,0:26:23.64:172,24,0	1/1:19,0:19:42.94:241,43,0	./.	0/1:14,0:13:0.08:0,0,0	1/1:28,0:26:45.95:299,46,0	1/1:19,0:19:41.18:264,41,0	1/1:20,0:20:41.23:317,41,0	1/1:5,0:5:11.53:66,12,0
chr10	34856059	.	GCACACA	G	7065.98	PASS	AB=0.934;AC=44;AF=0.846;AN=52;BaseQRankSum=-1.203;DP=511;FS=2.724;HRun=0;HaplotypeScore=185.8585;InbreedingCoeff=0.3748;MQ=45.81;MQ0=16;MQRankSum=2.869;QD=15.33;ReadPosRankSum=2.368;VQSLOD=4.4674;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:19:0.46:2,0,0	1/1:2,6:8:9.03:179,9,0	./.	./.	1/1:24,7:31:29.38:425,29,0	1/1:15,1:15:24.82:287,25,0	1/1:16,0:16:5.23:43,5,0	1/1:12,0:11:4.83:49,5,0	1/1:8,12:21:23.89:383,24,0	1/1:19,2:20:35.94:461,36,0	1/1:17,3:22:17.95:264,18,0	0/0:15,0:15:9.25:0,9,47	1/1:20,5:24:33.55:520,34,0	1/1:12,4:15:28.64:462,29,0	1/1:20,1:21:11.83:420,12,0	1/1:13,6:20:36.10:531,36,0	1/1:26,1:27:24.94:491,25,0	0/1:11,3:14:20.18:170,0,20	1/1:17,0:15:10.55:160,11,0	1/1:14,3:16:23.84:287,24,0	0/1:28,0:26:0.07:245,0,0	1/1:13,5:19:34.25:468,34,0	0/0:18,0:18:2.37:0,2,8	0/1:14,0:13:0.01:0,0,0	1/1:21,5:25:31.72:415,32,0	0/1:19,1:21:22.76:230,0,23	1/1:19,1:21:35.18:466,35,0	1/1:4,1:5:9:109,9,0
chr10	34856065	.	A	ATG	3724.67	PASS	AB=0.979;AC=26;AF=0.464;AN=56;BaseQRankSum=-2.063;DP=512;FS=46.716;HRun=0;HaplotypeScore=167.6341;InbreedingCoeff=-0.7236;MQ=45.56;MQ0=17;MQRankSum=-0.855;QD=7.73;ReadPosRankSum=0.889;VQSLOD=1.1459;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:18:18.06:0,18,262	0/1:8,0:8:47.12:47,0,70	0/0:2,0:1:3.01:0,3,44	0/0:9,0:2:6.02:0,6,77	0/1:31,0:31:99:111,0,463	0/1:17,1:17:56.06:298,0,56	0/1:11,10:21:10.45:10,0,280	0/1:11,0:10:47.71:48,0,131	0/1:20,0:20:43.02:43,0,139	0/1:20,1:20:99:260,0,217	0/1:22,0:22:22.87:23,0,64	0/1:14,0:14:14.79:18,0,15	0/1:26,0:25:99:336,0,321	0/1:17,0:16:94.41:245,0,94	0/1:25,0:25:99:456,0,260	0/1:21,0:21:99:242,0,167	0/1:28,1:28:99:288,0,392	0/1:15,0:15:44.97:45,0,242	0/1:15,0:13:72.83:73,0,152	0/1:19,0:18:99:157,0,237	0/1:28,0:26:63.36:201,0,63	0/1:17,0:17:99:115,0,277	1/1:16,0:16:0.89:2,1,0	0/1:13,0:12:0:0,0,0	0/1:29,0:27:99:175,0,287	0/1:22,0:22:99:163,0,361	0/1:18,1:19:99:362,0,130	0/1:5,0:5:7.49:7,0,113
chr10	34856072	.	C	CATGCAT	235.54	PASS	AB=0.778;AC=5;AF=0.089;AN=56;BaseQRankSum=0.840;DP=522;FS=2.356;HRun=0;HaplotypeScore=214.0137;InbreedingCoeff=0.7420;MQ=46.16;MQ0=17;MQRankSum=0.277;QD=4.81;ReadPosRankSum=0.602;VQSLOD=2.7988;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:17:15.05:0,15,301	0/0:8,0:8:15.03:0,15,201	0/0:8,0:5:8.99:0,9,126	0/0:13,0:6:15.05:0,15,253	0/0:30,0:30:56.29:0,56,943	0/0:18,0:17:38.70:0,39,502	0/0:22,0:22:20.11:0,20,492	0/0:12,0:11:27.90:0,28,367	0/0:19,0:19:29.99:0,30,499	0/0:22,0:21:53.89:0,54,832	0/0:22,0:22:20.28:0,20,318	1/1:16,0:16:12.04:229,12,0	0/0:23,0:22:62.50:0,63,911	0/0:16,0:16:42.08:0,42,597	0/0:23,0:23:27.70:0,28,599	0/0:21,0:21:53.57:0,54,740	0/0:29,0:28:61.34:0,61,1112	0/0:16,0:16:44.71:0,45,597	0/0:16,0:14:0.93:0,1,388	0/0:15,0:15:29.79:0,30,608	0/0:29,0:27:27.05:0,27,404	0/0:19,0:19:27.33:0,27,786	1/1:19,0:19:7.51:113,8,0	0/1:10,4:13:0.08:0,0,0	0/0:29,0:27:50.55:0,51,756	0/0:19,0:19:49.09:0,49,745	0/0:20,0:20:54.10:0,54,758	0/0:5,0:5:12.04:0,12,231
chr10	34856158	.	T	TA	5075.37	PASS	AB=0.687;AC=48;AF=0.857;AN=56;BaseQRankSum=-2.882;DP=535;FS=1.171;HRun=13;HaplotypeScore=71.3478;InbreedingCoeff=0.1940;MQ=72.81;MQ0=2;MQRankSum=1.822;QD=10.38;ReadPosRankSum=-0.148;VQSLOD=4.3034;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,1:28:33.62:0,34,367	1/1:0,4:8:14.32:84,14,0	0/1:18,1:16:22.32:22,0,33	0/0:18,0:14:3.06:0,3,42	1/1:6,0:25:43.97:236,44,0	0/1:10,14:24:16.89:242,0,17	1/1:3,7:10:7.10:178,7,0	1/1:9,14:23:42.32:359,42,0	1/1:2,3:14:25.91:149,26,0	1/1:7,20:28:35.49:425,35,0	0/1:4,8:13:0.48:157,0,0	1/1:5,2:21:17.31:103,17,0	1/1:11,18:30:7.26:312,7,0	1/1:4,10:14:0.47:147,0,0	0/1:7,19:27:11.32:171,0,11	1/1:3,12:16:23.18:241,23,0	1/1:7,1:27:22.88:125,23,0	1/1:4,10:15:0.28:133,0,0	1/1:6,16:24:7.15:280,7,0	1/1:4,16:21:0.85:280,1,0	1/1:5,14:20:11.87:291,12,0	1/1:8,8:19:8.13:212,8,0	1/1:8,0:9:14.50:90,15,0	1/1:2,0:15:11.36:57,11,0	1/1:5,21:27:15.97:311,16,0	1/1:5,9:15:6.30:189,6,0	1/1:7,13:20:15.35:258,15,0	1/1:3,0:3:2.99:23,3,0
chr10	34856336	.	A	AT	1612.31	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-2.104;DP=579;FS=6.484;HRun=6;HaplotypeScore=63.2619;InbreedingCoeff=0.9847;MQ=69.60;MQ0=0;MQRankSum=-2.341;QD=27.33;ReadPosRankSum=0.629;VQSLOD=4.0739;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:63.01:0,63,611	0/0:8,0:8:21.05:0,21,214	0/0:12,0:12:14.17:0,14,156	0/0:6,0:6:14.77:0,15,118	0/0:35,0:35:99:0,102,1008	0/0:25,0:25:66.08:0,66,645	0/0:20,0:20:57.12:0,57,576	0/0:27,0:27:72.14:0,72,721	0/0:20,0:20:60.14:0,60,612	0/0:28,0:28:78.17:0,78,796	0/0:23,0:23:54.06:0,54,527	1/1:1,13:14:33.11:415,33,0	0/0:26,0:26:72.16:0,72,734	0/0:13,0:13:36.08:0,36,364	0/0:32,0:32:90.19:0,90,910	0/0:22,0:22:60.13:0,60,612	0/0:19,0:19:47.99:0,48,462	0/0:11,0:11:33.08:0,33,337	0/0:24,0:24:63.12:0,63,630	0/0:20,0:20:51.11:0,51,520	0/0:12,0:12:33.07:0,33,337	0/0:19,0:19:54.10:0,54,544	1/1:3,22:25:57.14:699,57,0	1/1:0,20:20:51.16:641,51,0	0/0:34,0:34:75.13:0,75,757	0/0:23,0:23:63.10:0,63,632	0/0:29,0:29:78.17:0,78,793	0/0:8,0:8:24.05:0,24,245
chr10	34856862	.	ATGT	A	2554.20	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.343;DP=725;FS=4.073;HRun=0;HaplotypeScore=132.6322;InbreedingCoeff=0.9990;MQ=77.48;MQ0=0;MQRankSum=-1.367;QD=41.20;ReadPosRankSum=1.739;VQSLOD=4.6693;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:33:99:0,102,2304	0/0:19,0:19:57.17:0,57,1241	0/0:25,0:25:69.03:0,69,1350	0/0:19,0:19:47.86:0,48,907	0/0:37,0:37:99:0,108,2397	0/0:22,0:21:66.23:0,66,1490	0/0:17,0:17:51.18:0,51,1152	0/0:36,0:36:99:0,102,2186	0/0:31,0:31:84.28:0,84,1831	0/0:34,0:34:99:0,102,2300	0/0:29,0:29:84.02:0,84,1836	1/1:1,21:22:57.19:949,57,0	0/0:40,0:40:99:0,114,2570	0/0:26,0:26:78.26:0,78,1684	0/0:33,0:33:87.30:0,87,1965	0/0:32,0:32:90.31:0,90,2007	0/0:30,0:30:90.31:0,90,2005	0/0:11,0:11:33.11:0,33,745	0/0:22,0:22:54.17:0,54,1120	0/0:21,0:21:63.22:0,63,1417	0/0:20,0:20:54.19:0,54,1218	0/0:24,0:24:72.25:0,72,1625	1/1:1,27:28:75.26:1249,75,0	1/1:0,12:12:30.10:499,30,0	0/0:33,0:33:93.30:0,93,2040	0/0:28,0:28:81.28:0,81,1830	0/0:32,0:32:93.31:0,93,1995	0/0:8,0:8:24.08:0,24,542
chr10	34857436	.	T	TACAG	6749.38	PASS	AC=40;AF=0.870;AN=46;BaseQRankSum=2.995;DP=556;FS=1.520;HRun=0;HaplotypeScore=48.7800;InbreedingCoeff=0.6296;MQ=57.65;MQ0=9;MQRankSum=-8.989;QD=15.07;ReadPosRankSum=2.172;VQSLOD=4.3038;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:45.15:0,45,839	./.	0/0:18,0:18:51.16:0,51,873	0/0:23,0:23:56.72:0,57,921	1/1:8,18:14:6.02:158,6,0	1/1:3,24:12:3.01:80,3,0	./.	1/1:11,19:19:36.03:727,36,0	1/1:4,16:8:3.01:80,3,0	1/1:5,13:8:12:228,12,0	1/1:2,6:5:3.01:80,3,0	1/1:6,19:23:29.94:796,30,0	1/1:9,18:22:27.09:676,27,0	1/1:4,17:17:18.06:476,18,0	1/1:2,30:17:6.02:159,6,0	1/1:4,23:21:9.03:239,9,0	1/1:1,10:10:9.03:239,9,0	1/1:2,4:6:3.01:80,3,0	1/1:5,8:7:3.01:80,3,0	1/1:11,21:16:15.05:398,15,0	./.	1/1:4,16:15:9.03:239,9,0	1/1:6,19:18:33.11:875,33,0	1/1:3,8:10:18.06:477,18,0	./.	1/1:13,10:15:23.94:387,24,0	1/1:8,23:21:12.04:275,12,0	./.
chr10	34859625	.	ATCAGTTCAT	A	2423.15	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.202;DP=693;FS=0.707;HRun=0;HaplotypeScore=222.1967;InbreedingCoeff=0.9852;MQ=82.79;MQ0=0;MQRankSum=-8.590;QD=56.35;ReadPosRankSum=2.351;VQSLOD=3.5274;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,111,4976	0/0:7,0:7:21.07:0,21,1029	0/0:22,0:22:66.23:0,66,2567	0/0:32,0:32:84.26:0,84,3375	0/0:28,0:28:81.28:0,81,3628	0/0:26,0:26:78.27:0,78,3598	0/0:25,0:25:72.25:0,72,3360	0/0:33,0:33:96.33:0,96,4229	0/0:27,0:27:78.27:0,78,3735	0/0:24,0:24:72.24:0,72,3379	0/0:17,0:17:51.17:0,51,2278	1/1:0,19:19:51.18:1544,51,0	0/0:22,0:22:66.23:0,66,3078	0/0:30,0:30:90.31:0,90,4169	0/0:31,0:31:93.32:0,93,4466	0/0:23,0:23:66.23:0,66,2890	0/0:26,0:26:72.25:0,72,3430	0/0:20,0:20:60.21:0,60,2501	0/0:24,0:24:69.24:0,69,3164	0/0:34,0:34:99:0,99,4560	0/0:25,0:25:69.24:0,69,3186	0/0:29,0:29:84.29:0,84,3817	1/1:2,6:8:12.04:372,12,0	1/1:6,10:16:23.61:646,24,0	0/0:28,0:28:84.29:0,84,3751	0/0:28,0:28:81.28:0,81,3863	0/0:43,0:43:99:0,126,5726	0/0:8,0:8:21.07:0,21,1027
chr10	34859724	.	C	CA	2453.78	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-7.640;DP=761;FS=12.081;HRun=3;HaplotypeScore=203.3644;InbreedingCoeff=0.9988;MQ=74.51;MQ0=0;MQRankSum=-2.370;QD=33.61;ReadPosRankSum=2.388;VQSLOD=0.7681;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:75.23:0,75,900	0/0:9,0:9:27.08:0,27,323	0/0:28,0:29:72.20:0,72,835	0/0:21,0:21:63.18:0,63,738	0/0:47,0:47:99:0,141,1671	0/0:32,0:31:81.21:0,81,955	0/0:25,0:25:75.17:0,75,861	0/0:34,0:34:93.03:0,93,1019	0/0:34,0:34:99:0,99,1172	0/0:36,0:36:99:0,102,1189	0/0:38,0:38:99:0,111,1296	1/1:1,33:34:93.31:1300,93,0	0/0:29,0:29:75.23:0,75,898	0/0:23,0:23:63.19:0,63,756	0/0:30,0:30:87.20:0,87,1013	0/0:30,0:30:87.25:0,87,1032	0/0:15,0:15:42.13:0,42,503	0/0:9,0:9:24.05:0,24,274	0/0:22,0:22:60.18:0,60,720	0/0:36,0:36:93.28:0,93,1115	0/0:17,0:17:48.08:0,48,545	0/0:38,0:38:99:0,111,1331	1/1:1,19:20:48.14:672,48,0	1/1:0,19:19:45.15:625,45,0	0/0:33,0:33:96.25:0,96,1135	0/0:39,0:39:99:0,111,1313	0/0:24,0:24:63.18:0,63,744	0/0:12,0:12:33.10:0,33,395
chr10	34859845	.	TGTCCTTTA	T	3869.09	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=10.981;DP=684;FS=1.155;HRun=0;HaplotypeScore=192.6511;InbreedingCoeff=0.9778;MQ=87.61;MQ0=0;MQRankSum=-10.776;QD=67.88;ReadPosRankSum=0.453;VQSLOD=3.8170;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:66.23:0,66,2709	0/0:9,0:9:27.09:0,27,956	0/0:25,0:25:66.21:0,66,2416	0/0:32,0:32:90.26:0,90,3229	0/0:29,0:29:84.27:0,84,2798	0/0:30,0:30:84.29:0,84,3574	0/0:32,0:32:90.30:0,90,3709	0/0:31,0:31:84.29:0,84,3555	0/0:34,0:34:99:0,99,3376	0/0:33,0:33:93.32:0,93,4034	0/0:16,0:16:45.15:0,45,1839	1/1:0,28:28:81.28:2239,81,0	0/0:18,0:18:51.16:0,51,2153	0/0:29,0:29:81.26:0,81,3313	0/0:35,0:35:99:0,102,4351	0/0:36,0:36:99:0,105,4490	0/0:23,0:23:66.23:0,66,2401	0/0:23,0:23:66.23:0,66,2868	0/0:18,0:18:54.15:0,54,2203	0/0:22,0:22:60.19:0,60,2344	0/0:29,0:29:84.29:0,84,3549	0/0:21,0:21:60.21:0,60,2647	1/1:4,14:18:42.14:1086,42,0	1/1:3,8:11:21.07:544,21,0	0/0:19,0:19:54.17:0,54,2205	0/0:29,0:29:84.29:0,84,3670	0/0:29,0:28:81.28:0,81,3586	0/0:3,0:3:9.03:0,9,399
chr10	34862347	.	C	CA	1433.85	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=10.311;DP=546;FS=1.236;HRun=6;HaplotypeScore=56.9516;InbreedingCoeff=0.9765;MQ=64.55;MQ0=0;MQRankSum=-2.683;QD=30.51;ReadPosRankSum=1.696;VQSLOD=4.2952;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:42.10:0,42,428	0/0:12,0:12:36.06:0,36,360	0/0:14,0:14:23.38:0,23,271	0/0:9,0:9:12.04:0,12,195	0/0:46,0:46:99:0,129,1307	0/0:15,0:15:36.08:0,36,367	0/0:13,0:13:39.09:0,39,398	0/0:38,0:38:93.14:0,93,919	0/0:18,0:18:45.08:0,45,452	0/0:26,0:26:75.16:0,75,759	0/0:28,0:28:75.17:0,75,765	1/1:0,18:18:51.16:641,51,0	0/0:21,0:21:60.14:0,60,612	0/0:20,0:20:60.12:0,60,605	0/0:20,0:20:51.10:0,51,514	0/0:10,0:10:30.05:0,30,299	0/0:15,0:15:39.06:0,39,388	0/0:21,0:21:48.06:0,48,479	0/0:20,0:20:51.10:0,51,514	0/0:26,0:26:69.14:0,69,697	0/0:11,0:11:30.07:0,30,306	0/0:15,0:15:42.08:0,42,422	1/1:2,21:23:60.19:744,60,0	1/1:0,6:6:15.05:189,15,0	0/0:18,0:18:48.11:0,48,490	0/0:30,0:30:75.13:0,75,751	0/0:30,0:31:82.99:0,83,827	0/0:7,0:7:15.03:0,15,153
chr10	34862633	.	G	GA	425.86	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=10.720;DP=655;FS=2.815;HRun=2;HaplotypeScore=86.0261;InbreedingCoeff=0.9383;MQ=97.61;MQ0=0;MQRankSum=-9.982;QD=7.60;ReadPosRankSum=0.760;VQSLOD=1.0603;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:80.04:0,80,956	0/0:12,0:12:36.11:0,36,446	0/0:36,0:36:93.18:0,93,1165	0/0:33,0:33:84.18:0,84,981	0/0:40,0:40:99:0,120,1475	0/0:17,0:17:51.16:0,51,632	0/0:18,0:18:54.17:0,54,669	0/0:33,0:33:93.28:0,93,1133	0/0:18,0:18:51.16:0,51,632	0/0:32,0:32:90.28:0,90,1116	0/0:22,0:22:66.21:0,66,818	1/1:1,19:20:45.05:215,45,0	0/0:33,0:33:96.29:0,96,1178	0/0:14,0:14:42.13:0,42,520	0/0:31,0:32:92.49:0,92,1110	0/0:25,0:25:72.20:0,72,867	0/0:21,0:21:63.20:0,63,780	0/0:17,0:17:45.12:0,45,558	0/0:19,0:19:48.14:0,48,585	0/0:31,0:31:87.27:0,87,1079	0/0:15,0:15:45.11:0,45,541	0/0:25,0:25:72.23:0,72,893	1/1:3,21:24:49.31:270,49,0	1/1:1,11:12:19.10:83,19,0	0/0:32,0:32:93.27:0,93,1137	0/0:20,0:20:60.19:0,60,744	0/0:26,0:26:75.24:0,75,929	0/0:1,0:1:3.01:0,3,37
chr10	34862637	.	AT	A	415.10	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=10.705;DP=653;FS=2.889;HRun=1;HaplotypeScore=85.4618;InbreedingCoeff=0.9772;MQ=97.68;MQ0=0;MQRankSum=-10.281;QD=7.69;ReadPosRankSum=1.786;VQSLOD=1.0979;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:81.28:0,81,1294	0/0:12,0:12:36.12:0,36,576	0/0:36,0:36:99:0,108,1633	0/0:33,0:33:93.27:0,93,1385	0/0:42,0:42:99:0,122,1962	0/0:17,0:17:51.17:0,51,815	0/0:19,0:19:57.19:0,57,904	0/0:31,0:31:93.29:0,93,1418	0/0:19,0:19:57.18:0,57,888	0/0:31,0:31:93.31:0,93,1467	0/0:23,0:23:66.23:0,66,1055	1/1:0,19:19:44.58:212,45,0	0/0:34,0:34:99:0,101,1560	0/0:17,0:17:51.16:0,51,790	0/0:31,0:31:93.30:0,93,1436	0/0:22,0:22:66.23:0,66,1055	0/0:21,0:21:63.21:0,63,1007	0/0:18,0:18:48.15:0,48,744	0/0:15,0:15:45.15:0,45,718	0/0:30,0:30:90.31:0,90,1439	0/0:16,0:16:48.16:0,48,760	0/0:24,0:24:72.25:0,72,1151	1/1:2,21:23:45.19:234,45,0	1/1:0,12:12:19.04:112,19,0	0/0:30,0:30:90.31:0,90,1431	0/0:21,0:21:63.21:0,63,1008	0/0:26,0:26:78.27:0,78,1247	0/0:3,0:3:9.03:0,9,140
chr10	34863131	.	A	AG	407.46	PASS	AB=0.667;AC=5;AF=0.089;AN=56;BaseQRankSum=7.597;DP=731;FS=9.577;HRun=2;HaplotypeScore=77.0161;InbreedingCoeff=0.7760;MQ=61.84;MQ0=21;MQRankSum=-3.397;QD=11.98;ReadPosRankSum=-0.281;VQSLOD=1.1255;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:54.18:0,54,755	0/0:16,0:16:48.16:0,48,671	0/0:25,0:11:27.07:0,27,344	0/0:35,0:10:27.09:0,27,375	0/0:32,0:32:93.27:0,93,1270	0/0:33,0:33:96.31:0,96,1325	0/0:21,0:21:63.20:0,63,863	0/0:35,0:32:93.31:0,93,1284	0/0:21,0:21:63.21:0,63,879	0/0:33,0:33:96.32:0,96,1341	0/0:27,0:27:81.27:0,81,1128	1/1:4,6:10:26.41:218,26,0	0/0:44,0:44:99:0,123,1682	0/0:26,0:26:78.26:0,78,1090	0/0:36,0:36:99:0,105,1467	0/0:27,0:26:81.27:0,81,1133	0/0:22,0:22:66.21:0,66,906	0/0:14,0:14:36.12:0,36,499	0/0:18,0:18:54.18:0,54,755	0/0:37,0:37:99:0,111,1534	0/0:44,0:44:99:0,129,1804	0/0:23,0:23:69.23:0,69,963	1/1:5,5:9:17.82:188,18,0	0/1:7,7:13:23.14:130,0,23	0/0:28,0:28:84.26:0,84,1153	0/0:34,0:34:99:0,102,1410	0/0:36,0:36:99:0,105,1451	0/0:12,0:12:36.12:0,36,504
chr10	34864311	.	AGC	A	196.90	PASS	AC=6;AF=0.115;AN=52;BaseQRankSum=6.141;DP=637;FS=3.888;HRun=0;HaplotypeScore=121.0479;InbreedingCoeff=0.8548;MQ=51.53;MQ0=51;MQRankSum=-5.614;QD=5.79;ReadPosRankSum=-0.367;VQSLOD=3.0974;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:90.31:0,90,1729	0/0:18,0:18:54.19:0,54,1022	./.	./.	0/0:35,0:34:84.29:0,84,1617	0/0:26,0:26:75.25:0,75,1440	0/0:22,0:22:66.20:0,66,1205	0/0:33,0:31:90.31:0,90,1706	0/0:23,0:23:69.24:0,69,1308	0/0:34,0:33:99:0,99,1870	0/0:20,0:20:48.16:0,48,896	1/1:2,6:4:3:28,3,0	0/0:25,0:25:75.26:0,75,1420	0/0:14,0:14:42.12:0,42,777	0/0:30,0:30:90.29:0,90,1692	0/0:16,0:16:48.16:0,48,922	0/0:24,0:24:66.23:0,66,1253	0/0:15,0:15:45.15:0,45,857	0/0:16,0:15:45.15:0,45,830	0/0:23,0:22:63.22:0,63,1179	0/0:26,0:26:69.24:0,69,1308	0/0:22,0:22:63.22:0,63,1189	1/1:0,21:13:32.71:265,33,0	1/1:0,4:2:2.99:24,3,0	0/0:24,0:23:57.17:0,57,1059	0/0:25,0:25:75.26:0,75,1430	0/0:43,0:43:99:0,126,2388	0/0:8,0:8:15.05:0,15,272
chr10	34864314	.	AGGAC	A	380.90	PASS	AC=6;AF=0.115;AN=52;BaseQRankSum=6.140;DP=635;FS=3.901;HRun=0;HaplotypeScore=143.1566;InbreedingCoeff=0.8577;MQ=51.43;MQ0=52;MQRankSum=-5.607;QD=11.90;ReadPosRankSum=-0.619;VQSLOD=3.2312;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:96.26:0,96,2632	0/0:18,0:18:54.19:0,54,1498	./.	./.	0/0:34,0:33:84.29:0,84,2388	0/0:25,0:25:75.24:0,75,2111	0/0:21,0:21:63.22:0,63,1769	0/0:34,0:32:93.30:0,93,2519	0/0:21,0:21:63.20:0,63,1763	0/0:33,0:32:96.33:0,96,2781	0/0:18,0:18:45.15:0,45,1285	1/1:1,6:4:3.01:41,3,0	0/0:25,0:25:75.26:0,75,2173	0/0:16,0:16:48.15:0,48,1289	0/0:28,0:28:84.29:0,84,2382	0/0:17,0:17:51.18:0,51,1460	0/0:25,0:25:69.24:0,69,1963	0/0:15,0:15:45.15:0,45,1277	0/0:17,0:16:48.16:0,48,1347	0/0:24,0:23:66.23:0,66,1895	0/0:25,0:25:66.19:0,66,1787	0/0:22,0:22:63.17:0,63,1757	1/1:0,21:13:33.10:421,33,0	1/1:0,4:2:3.01:38,3,0	0/0:23,0:22:54.19:0,54,1564	0/0:25,0:25:75.24:0,75,2093	0/0:43,0:43:99:0,129,3696	0/0:9,0:9:18.06:0,18,504
chr10	34865745	.	C	CT	3410.82	PASS	AB=0.986;AC=42;AF=0.750;AN=56;BaseQRankSum=7.894;DP=296;FS=127.653;HRun=1;HaplotypeScore=217.0038;InbreedingCoeff=0.1210;MQ=46.15;MQ0=16;MQRankSum=-6.850;QD=14.51;ReadPosRankSum=-0.122;VQSLOD=-0.2673;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:43:99:0,103,1536	1/1:5,0:4:12.01:126,12,0	0/0:8,0:6:14.12:0,14,99	0/0:5,0:2:3.31:0,3,16	0/1:14,2:16:35.13:309,0,35	1/1:12,0:12:24.09:223,24,0	1/1:2,0:2:2.98:22,3,0	0/1:11,0:9:1.35:63,0,1	1/1:8,0:5:11.98:109,12,0	0/1:19,0:17:76.42:76,0,155	0/1:14,0:14:2.38:279,0,2	1/1:5,0:3:3.48:39,3,0	1/1:14,1:14:18.88:302,19,0	1/1:10,1:8:8.89:78,9,0	1/1:8,0:7:14.16:145,14,0	1/1:9,0:8:16.35:142,16,0	1/1:8,0:5:11.94:109,12,0	1/1:10,0:10:4.16:107,4,0	0/1:7,0:5:28.70:29,0,30	0/1:9,0:8:18.79:125,0,19	1/1:5,0:4:5.86:37,6,0	1/1:5,0:3:8.95:82,9,0	1/1:3,0:3:5.84:78,6,0	1/1:3,0:3:6.01:64,6,0	1/1:10,0:10:16.67:187,17,0	0/1:12,0:11:14.08:159,0,14	0/1:24,0:24:53.42:396,0,53	1/1:4,0:4:11.99:125,12,0
chr10	34876065	.	AT	A	3221.92	PASS	AB=0.977;AC=49;AF=0.907;AN=54;BaseQRankSum=-5.850;DP=292;FS=39.398;HRun=6;HaplotypeScore=51.3946;InbreedingCoeff=0.6496;MQ=84.68;MQ0=5;MQRankSum=-6.760;QD=14.78;ReadPosRankSum=2.287;VQSLOD=1.1281;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:48.06:0,48,562	1/1:4,0:4:11.88:80,12,0	0/0:51,0:25:33.41:0,33,318	0/1:41,1:24:9.22:9,0,106	1/1:11,0:11:17.70:113,18,0	1/1:17,0:16:47.53:321,48,0	1/1:5,0:5:11.85:78,12,0	1/1:4,0:4:11.95:94,12,0	1/1:2,0:2:5.96:42,6,0	1/1:12,0:12:35.76:261,36,0	1/1:8,0:8:17.79:122,18,0	1/1:9,0:9:26.69:176,27,0	1/1:6,0:6:17.83:122,18,0	1/1:6,0:6:17.83:124,18,0	1/1:11,0:11:32.65:224,33,0	1/1:7,0:7:20.77:139,21,0	1/1:5,0:5:14.84:99,15,0	1/1:8,0:8:20.81:142,21,0	1/1:6,0:6:17.86:125,18,0	./.	1/1:2,0:2:5.93:39,6,0	1/1:4,0:4:11.90:84,12,0	1/1:7,0:7:20.77:138,21,0	1/1:2,0:2:5.84:35,6,0	1/1:8,0:8:23.74:161,24,0	1/1:13,0:13:38.63:265,39,0	1/1:10,0:10:29.72:202,30,0	1/1:9,0:9:23.81:165,24,0
chr10	34876253	.	AT	A	1594.69	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.635;DP=616;FS=5.997;HRun=6;HaplotypeScore=68.5331;InbreedingCoeff=0.9830;MQ=69.25;MQ0=0;MQRankSum=-1.218;QD=25.72;ReadPosRankSum=1.823;VQSLOD=4.0624;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:66.19:0,66,842	0/0:5,0:5:12:0,12,138	0/0:15,0:15:27.09:0,27,348	0/0:21,0:20:42.19:0,42,518	0/0:33,0:33:93.28:0,93,1193	0/0:32,0:32:84.27:0,84,1105	0/0:19,0:19:51.17:0,51,671	0/0:25,0:25:69.22:0,69,893	0/0:21,0:21:63.20:0,63,828	0/0:26,0:26:69.22:0,69,906	0/0:21,0:21:57.14:0,57,726	1/1:4,21:25:66.17:707,66,0	0/0:27,0:27:81.24:0,81,1046	0/0:24,0:24:69.22:0,69,908	0/0:28,0:28:84.27:0,84,1103	0/0:15,0:15:45.14:0,45,579	0/0:29,0:29:72.22:0,72,925	0/0:32,0:32:90.24:0,90,1165	0/0:14,0:13:33.11:0,33,434	0/0:30,0:30:87.23:0,87,1094	0/0:17,0:16:51.16:0,51,657	0/0:13,0:13:39.13:0,39,509	1/1:2,19:21:57.14:612,57,0	1/1:3,13:16:39.10:418,39,0	0/0:24,0:24:72.21:0,72,929	0/0:23,0:23:66.21:0,66,868	0/0:26,0:26:75.21:0,75,968	0/0:9,0:9:15.05:0,15,197
chr10	34876322	.	CTTT	C	1770.20	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=7.924;DP=607;FS=1.957;HRun=7;HaplotypeScore=111.2851;InbreedingCoeff=0.9991;MQ=57.86;MQ0=0;MQRankSum=1.025;QD=32.78;ReadPosRankSum=2.224;VQSLOD=2.1172;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:57.20:0,57,1207	0/0:9,0:9:27.09:0,27,603	0/0:15,0:14:33.11:0,33,717	0/0:20,0:19:48.16:0,48,971	0/0:37,0:37:99:0,99,2103	0/0:31,0:31:93.31:0,93,2037	0/0:15,0:15:45.15:0,45,990	0/0:37,0:37:96.32:0,96,2020	0/0:21,0:21:60.21:0,60,1340	0/0:27,0:27:75.26:0,75,1668	0/0:22,0:22:63.21:0,63,1357	1/1:5,19:24:57.17:853,57,0	0/0:21,0:21:51.18:0,51,1108	0/0:19,0:19:54.19:0,54,1205	0/0:32,0:32:93.31:0,93,1983	0/0:16,0:16:45.15:0,45,1006	0/0:21,0:21:60.16:0,60,1287	0/0:29,0:29:69.24:0,69,1436	0/0:16,0:16:42.13:0,42,859	0/0:23,0:23:63.17:0,63,1358	0/0:14,0:14:39.13:0,39,871	0/0:17,0:17:48.16:0,48,1033	1/1:1,12:13:35.88:465,36,0	1/1:3,14:17:39.13:595,39,0	0/0:28,0:28:84.24:0,84,1763	0/0:22,0:22:57.19:0,57,1233	0/0:29,0:29:69.23:0,69,1499	0/0:10,0:10:27.04:0,27,539
chr10	34877810	.	GA	G	2441.72	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=13.984;DP=724;FS=4.036;HRun=5;HaplotypeScore=87.1176;InbreedingCoeff=0.9977;MQ=73.17;MQ0=0;MQRankSum=-2.687;QD=28.07;ReadPosRankSum=1.450;VQSLOD=4.0287;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,150,2034	0/0:7,0:7:21.07:0,21,287	0/0:22,0:22:57.14:0,57,733	0/0:14,0:14:39.11:0,39,486	0/0:35,0:35:99:0,102,1380	0/0:20,0:20:60.20:0,60,821	0/0:27,0:27:69.20:0,69,912	0/0:35,0:35:93.27:0,93,1191	0/0:24,0:24:69.18:0,69,907	0/0:24,0:24:60.20:0,60,817	0/0:26,0:26:69.22:0,69,928	1/1:2,34:36:96.27:1089,96,0	0/0:27,0:27:81.27:0,81,1108	0/0:36,0:36:99:0,99,1352	0/0:36,0:35:99:0,102,1359	0/0:32,0:32:90.30:0,90,1231	0/0:24,0:24:69.23:0,69,944	0/0:12,0:12:33.11:0,33,450	0/0:19,0:19:51.14:0,51,656	0/0:22,0:22:63.21:0,63,862	0/0:32,0:32:93.31:0,93,1272	0/0:25,0:25:75.19:0,75,989	1/1:2,23:25:66.19:747,66,0	1/1:3,23:26:66.19:749,66,0	0/0:26,0:26:78.26:0,78,1067	0/0:26,0:26:78.26:0,78,1061	0/0:27,0:27:81.27:0,81,1107	0/0:8,0:8:24.08:0,24,328
chr10	34878141	.	G	GT	3732.28	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.273;DP=759;FS=0.421;HRun=1;HaplotypeScore=81.0375;InbreedingCoeff=0.9938;MQ=77.77;MQ0=0;MQRankSum=-1.362;QD=38.88;ReadPosRankSum=2.389;VQSLOD=4.2962;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,105,1347	0/0:9,0:9:27.09:0,27,351	0/0:18,0:18:48.06:0,48,546	0/0:17,0:17:16.25:0,16,299	0/0:30,0:30:87.27:0,87,1114	0/0:38,0:38:99:0,114,1480	0/0:31,0:31:84.26:0,84,1076	0/0:30,0:30:84.27:0,84,1091	0/0:25,0:25:75.24:0,75,973	0/0:26,0:26:75.24:0,75,962	0/0:27,0:27:81.26:0,81,1049	1/1:1,33:34:90.30:1349,90,0	0/0:30,0:30:87.28:0,87,1130	0/0:37,0:37:99:0,111,1441	0/0:35,0:35:99:0,105,1346	0/0:26,0:26:78.25:0,78,1013	0/0:28,0:28:81.26:0,81,1052	0/0:9,0:9:21.07:0,21,273	0/0:20,0:20:57.18:0,57,737	0/0:26,0:26:75.22:0,75,945	0/0:49,0:49:99:0,144,1869	0/0:27,0:27:81.26:0,81,1051	1/1:0,28:28:72.24:1079,72,0	1/1:0,34:34:87.29:1304,87,0	0/0:21,0:21:63.20:0,63,818	0/0:28,0:28:84.27:0,84,1091	0/0:30,0:30:87.28:0,87,1122	0/0:11,0:11:33.11:0,33,429
chr10	34878372	.	AC	A	2860.94	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=4.586;DP=671;FS=4.945;HRun=1;HaplotypeScore=82.4206;InbreedingCoeff=0.9984;MQ=71.45;MQ0=0;MQRankSum=-3.021;QD=35.32;ReadPosRankSum=1.068;VQSLOD=3.8130;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,135,2152	1/1:0,9:9:27.09:378,27,0	0/0:24,0:22:62.88:0,63,933	0/0:14,0:13:36.11:0,36,519	1/1:0,29:29:78.26:1091,78,0	0/0:26,0:26:78.25:0,78,1223	0/0:27,0:27:81.28:0,81,1292	0/0:43,0:43:99:0,123,1903	1/1:0,14:14:33.11:462,33,0	0/0:19,0:19:57.19:0,57,911	0/0:26,0:26:75.21:0,75,1171	0/0:26,0:26:75.26:0,75,1197	0/0:37,0:37:99:0,111,1771	0/0:26,0:26:75.26:0,75,1199	0/0:25,0:25:75.26:0,75,1199	0/0:11,0:11:33.11:0,33,528	1/1:0,29:29:78.26:1091,78,0	0/0:21,0:21:63.15:0,63,950	0/0:23,0:23:69.22:0,69,1050	0/0:22,0:22:66.21:0,66,1026	0/0:39,0:39:99:0,117,1846	0/0:23,0:23:69.22:0,69,1081	0/0:21,0:18:54.15:0,54,815	0/0:19,0:19:57.17:0,57,865	0/0:16,0:16:48.16:0,48,768	0/0:18,0:18:54.18:0,54,864	0/0:32,0:32:96.29:0,96,1475	0/0:7,0:7:21.07:0,21,328
chr10	34878399	.	A	AC	2618.17	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-0.661;DP=681;FS=4.547;HRun=1;HaplotypeScore=78.8151;InbreedingCoeff=0.9969;MQ=86.36;MQ0=0;MQRankSum=-4.073;QD=39.08;ReadPosRankSum=-0.522;VQSLOD=3.9784;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,126,1602	0/0:10,0:10:30.10:0,30,389	0/0:24,0:24:66.20:0,66,842	0/0:25,0:25:75.19:0,75,939	0/0:27,0:27:78.24:0,78,998	0/0:22,0:22:66.21:0,66,857	0/0:23,0:23:69.22:0,69,896	0/0:35,0:35:99:0,99,1275	0/0:15,0:15:36.12:0,36,468	0/0:23,0:23:66.20:0,66,836	0/0:25,0:25:69.21:0,69,882	1/1:1,24:25:66.22:989,66,0	0/0:32,0:32:96.31:0,96,1246	0/0:29,0:29:87.26:0,87,1101	0/0:24,0:24:69.21:0,69,882	0/0:20,0:20:57.19:0,57,740	0/0:27,0:27:78.25:0,78,1013	0/0:18,0:18:54.18:0,54,701	0/0:29,0:29:78.72:0,79,1001	0/0:18,0:18:48.63:0,49,624	0/0:43,0:43:99:0,129,1657	0/0:24,0:24:69.21:0,69,882	1/1:1,21:21:60.16:872,60,0	1/1:0,20:20:60.20:899,60,0	0/0:14,0:14:42.12:0,42,531	0/0:26,0:26:72.23:0,72,935	0/0:33,0:33:99:0,99,1285	0/0:6,0:6:18.06:0,18,234
chr10	34880811	.	CT	C	1083.96	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.790;DP=596;FS=2.212;HRun=3;HaplotypeScore=60.6445;InbreedingCoeff=0.9575;MQ=67.94;MQ0=35;MQRankSum=-4.872;QD=24.09;ReadPosRankSum=0.705;VQSLOD=2.9732;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:69.21:0,69,973	0/0:3,0:3:9.02:0,9,113	0/0:19,0:17:42.12:0,42,552	0/0:23,0:21:51.15:0,51,669	0/0:9,0:8:24.08:0,24,346	0/0:25,0:24:69.23:0,69,993	0/0:18,0:18:51.16:0,51,717	0/0:30,0:29:87.29:0,87,1253	0/0:19,0:15:45.14:0,45,630	0/0:27,0:23:66.22:0,66,950	0/0:18,0:17:48.16:0,48,691	1/1:1,12:11:33.10:408,33,0	0/0:30,1:29:50.17:0,50,1169	0/0:16,0:16:48.16:0,48,691	0/0:29,0:28:81.24:0,81,1122	0/0:26,0:26:78.24:0,78,1090	0/0:17,0:16:48.14:0,48,671	0/0:19,0:19:54.16:0,54,742	0/0:34,0:30:90.30:0,90,1296	0/0:27,0:24:72.23:0,72,1020	0/0:29,0:29:73.45:0,73,1155	0/0:19,0:16:48.15:0,48,674	1/1:6,17:19:45.14:557,45,0	1/1:0,9:8:21.07:260,21,0	0/0:23,0:22:63.21:0,63,907	0/0:29,0:29:87.29:0,87,1233	0/0:35,0:32:96.32:0,96,1353	0/0:3,0:3:9.03:0,9,130
chr10	34880925	.	T	TC	290.73	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=6.164;DP=581;FS=0.000;HRun=0;HaplotypeScore=55.9196;InbreedingCoeff=0.9494;MQ=71.84;MQ0=16;MQRankSum=-6.185;QD=13.84;ReadPosRankSum=-0.914;VQSLOD=4.1933;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:16:48.15:0,48,653	0/0:6,0:6:18.06:0,18,251	0/0:18,0:18:53.84:0,54,706	0/0:12,0:12:21.08:0,21,352	0/0:17,3:17:51.17:0,51,712	0/0:26,0:26:78.14:0,78,940	0/0:16,0:16:48.13:0,48,637	0/0:25,0:25:69.22:0,69,937	0/0:10,0:10:30.08:0,30,389	0/0:34,1:34:99:0,99,1326	0/0:29,5:29:82.10:0,82,1082	1/1:0,8:5:11.95:147,12,0	0/0:35,1:36:61.96:0,62,1302	0/0:26,0:26:77.26:0,77,1007	0/0:24,0:24:69.23:0,69,964	0/0:28,0:28:81.24:0,81,1111	0/0:24,1:24:66.17:0,66,884	0/0:12,0:12:36.09:0,36,478	0/0:26,0:26:78.23:0,78,1030	0/0:33,1:33:99:0,99,1359	0/0:15,0:15:45.11:0,45,579	0/0:19,3:19:54.15:0,54,694	1/1:0,9:5:11.97:149,12,0	1/1:0,4:4:9.03:123,9,0	0/0:17,1:17:51.16:0,51,698	0/0:22,0:22:63.14:0,63,788	0/0:45,0:45:99:0,135,1838	0/0:7,1:7:21.06:0,21,277
chr10	34881996	.	CA	C	3087.49	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=12.633;DP=700;FS=5.271;HRun=2;HaplotypeScore=92.4110;InbreedingCoeff=0.9702;MQ=68.49;MQ0=0;MQRankSum=1.885;QD=34.69;ReadPosRankSum=2.697;VQSLOD=4.0635;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:81.22:0,81,1147	1/1:0,7:7:21.07:273,21,0	0/0:18,0:18:48.96:0,49,677	0/0:26,0:25:60.56:0,61,841	1/1:0,43:43:99:1573,123,0	0/0:32,0:32:96.31:0,96,1416	0/0:25,0:25:72.23:0,72,1042	0/0:19,0:19:54.13:0,54,766	1/1:0,26:26:72.23:934,72,0	0/0:34,0:34:96.33:0,96,1439	0/0:31,0:31:93.30:0,93,1372	0/0:26,0:26:72.24:0,72,1078	0/0:36,0:36:99:0,108,1597	0/0:29,0:29:84.22:0,84,1193	0/0:30,0:30:90.30:0,90,1348	0/0:18,0:18:54.18:0,54,809	1/1:1,12:13:36.12:467,36,0	0/0:16,0:16:39.13:0,39,583	0/0:21,0:21:63.17:0,63,884	0/0:40,0:40:99:0,114,1685	0/0:18,0:18:54.17:0,54,788	0/0:33,0:33:99:0,99,1465	0/0:24,0:24:69.23:0,69,1030	0/0:13,0:13:39.13:0,39,584	0/0:35,0:35:99:0,102,1510	0/0:24,0:24:72.24:0,72,1069	0/0:33,0:33:99:0,99,1460	0/0:2,0:2:6.02:0,6,90
chr10	34882707	.	TG	T	1236.16	PASS	AC=6;AF=0.115;AN=52;BaseQRankSum=6.854;DP=736;FS=0.668;HRun=1;HaplotypeScore=70.3265;InbreedingCoeff=0.9847;MQ=44.79;MQ0=89;MQRankSum=-0.332;QD=16.70;ReadPosRankSum=-0.088;VQSLOD=3.6033;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:27:69.19:0,69,1052	0/0:15,0:15:45.14:0,45,680	./.	./.	0/0:32,0:27:48.06:0,48,752	0/0:35,0:33:81.19:0,81,1245	0/0:28,0:24:54.17:0,54,837	0/0:35,0:33:99:0,99,1480	0/0:21,0:21:54.16:0,54,813	0/0:32,0:27:81.27:0,81,1257	0/0:22,0:18:39.01:0,39,588	1/1:1,14:14:24.08:335,24,0	0/0:27,0:25:69.22:0,69,1066	0/0:31,0:30:81.26:0,81,1268	0/0:26,0:26:72.25:0,72,1150	0/0:30,0:29:78.26:0,78,1222	0/0:28,0:25:48.08:0,48,729	0/0:11,0:9:21.07:0,21,335	0/0:24,0:18:54.14:0,54,811	0/0:30,0:28:81.19:0,81,1192	0/0:25,0:24:30.08:0,30,454	0/0:20,0:16:39.12:0,39,598	1/1:6,30:29:51.17:707,51,0	1/1:6,17:20:24.08:335,24,0	0/0:28,0:24:69.22:0,69,1078	0/0:32,0:28:81.27:0,81,1282	0/0:36,0:35:87.28:0,87,1356	0/0:9,0:7:11.57:0,12,185
chr10	34884786	.	T	TC	2493.98	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=6.767;DP=676;FS=2.320;HRun=0;HaplotypeScore=92.5294;InbreedingCoeff=0.9939;MQ=80.25;MQ0=0;MQRankSum=-1.850;QD=36.68;ReadPosRankSum=0.727;VQSLOD=3.5988;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:87.21:0,87,1144	0/0:12,0:12:36.12:0,36,503	0/0:18,0:18:42.13:0,42,545	0/0:20,0:19:44.32:0,44,528	0/0:39,0:39:99:0,111,1489	0/0:25,0:25:72.23:0,72,991	0/0:14,0:14:42.14:0,42,587	0/0:34,0:34:96.17:0,96,1285	0/0:21,0:21:57.17:0,57,767	0/0:22,0:22:66.15:0,66,886	0/0:18,0:18:51.17:0,51,713	1/1:6,15:21:54.15:755,54,0	0/0:26,0:26:78.25:0,78,1067	0/0:36,0:36:99:0,105,1375	0/0:24,0:24:69.23:0,69,964	0/0:35,0:35:99:0,105,1438	0/0:16,0:16:45.10:0,45,591	0/0:12,0:12:36.09:0,36,482	0/0:31,0:31:93.30:0,93,1271	0/0:38,0:38:99:0,111,1517	0/0:15,0:15:42.11:0,42,553	0/0:28,0:28:84.27:0,84,1158	1/1:0,36:36:96.23:1468,96,0	1/1:0,11:11:27.09:413,27,0	0/0:30,0:30:81.26:0,81,1104	0/0:25,0:25:72.23:0,72,991	0/0:35,0:35:99:0,99,1335	0/0:5,0:5:15.05:0,15,210
chr10	34884877	.	TA	T	18186.23	PASS	AB=0.629;AC=47;AF=0.839;AN=56;BaseQRankSum=5.927;DP=709;FS=38.146;HRun=2;HaplotypeScore=94.9287;InbreedingCoeff=0.5737;MQ=85.98;MQ0=0;MQRankSum=-6.607;QD=28.46;ReadPosRankSum=8.148;VQSLOD=2.2072;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:75.23:0,75,1081	1/1:0,15:15:39.13:506,39,0	0/0:25,0:25:62.86:0,63,795	0/0:20,0:20:48.15:0,48,697	0/1:8,18:26:19.75:286,0,20	1/1:4,26:30:51.36:899,51,0	1/1:0,22:22:60.20:779,60,0	1/1:1,25:26:72.16:887,72,0	1/1:0,29:29:81.26:1052,81,0	1/1:8,19:27:35.94:652,36,0	1/1:7,21:28:31.15:586,31,0	1/1:2,19:21:50.99:599,51,0	1/1:0,33:33:96.31:1246,96,0	1/1:0,26:26:66.21:857,66,0	1/1:0,38:38:96.31:1246,96,0	1/1:1,29:30:84.27:1089,84,0	1/1:0,24:24:66.21:857,66,0	1/1:0,5:5:15.05:195,15,0	1/1:1,16:17:33.95:542,34,0	0/1:12,17:29:43.69:455,0,44	1/1:3,24:27:48.16:621,48,0	1/1:11,15:26:4.28:559,4,0	0/1:10,10:20:12.89:245,0,13	1/1:2,9:11:11.69:154,12,0	1/1:4,28:32:69.22:888,69,0	1/1:7,26:33:34.01:686,34,0	1/1:0,47:47:99:1635,126,0	1/1:0,17:17:51.17:662,51,0
chr10	34884879	.	AC	A	6580.60	PASS	AB=1.000;AC=49;AF=0.875;AN=56;BaseQRankSum=9.468;DP=665;FS=6.073;HRun=2;HaplotypeScore=130.5503;InbreedingCoeff=0.8172;MQ=83.73;MQ0=0;MQRankSum=-5.497;QD=10.93;ReadPosRankSum=7.572;VQSLOD=2.8347;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:69.22:0,69,1014	1/1:15,0:15:36.48:178,36,0	0/0:21,0:21:54.14:0,54,757	0/0:17,0:17:48.16:0,48,707	1/1:20,0:20:22.60:111,23,0	1/1:28,1:29:70.74:409,71,0	1/1:22,0:22:56.41:272,56,0	0/1:31,0:31:55.67:224,0,56	1/1:29,0:29:76.06:369,76,0	1/1:22,0:22:24.35:190,24,0	1/1:23,2:25:20.78:204,21,0	1/1:20,0:20:24.38:265,24,0	1/1:35,0:35:46.58:396,47,0	1/1:27,0:27:40:286,40,0	1/1:39,0:39:68.47:418,68,0	1/1:29,0:29:79.07:399,79,0	1/1:24,0:24:62.14:313,62,0	1/1:5,0:5:14.13:70,14,0	1/1:18,0:18:38.48:190,38,0	1/1:21,0:21:36.46:172,36,0	1/1:25,0:24:45.35:239,45,0	1/1:21,0:21:48.63:293,49,0	1/1:13,0:13:20.34:125,20,0	1/1:10,0:10:11.22:68,11,0	1/1:28,1:29:63.86:316,64,0	1/1:28,1:29:43.23:204,43,0	1/1:47,0:46:99:617,120,0	1/1:17,0:17:48.64:251,49,0
chr10	34885270	.	CT	C	9899.07	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=13.622;DP=603;FS=9.090;HRun=7;HaplotypeScore=119.3828;InbreedingCoeff=0.9969;MQ=80.27;MQ0=0;MQRankSum=-2.506;QD=25.65;ReadPosRankSum=3.055;VQSLOD=3.9226;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:39.10:0,39,476	0/0:11,0:11:33.11:0,33,415	0/0:20,0:19:18.50:0,18,478	0/0:17,0:17:42.13:0,42,518	0/0:46,0:46:99:0,120,1483	1/1:2,28:30:81.18:826,81,0	1/1:0,14:14:36.08:367,36,0	1/1:2,26:28:74.85:752,75,0	0/0:22,0:22:63.19:0,63,775	1/1:1,19:20:57.11:575,57,0	1/1:2,24:26:63.14:643,63,0	0/0:22,0:22:66.21:0,66,830	1/1:1,15:16:42.09:428,42,0	1/1:0,18:18:42.10:428,42,0	1/1:1,24:25:60.14:612,60,0	1/1:7,22:29:54.11:551,54,0	0/0:9,0:9:24.06:0,24,288	1/1:0,8:8:24.05:245,24,0	1/1:7,15:22:51.08:506,51,0	1/1:0,40:40:99:1181,117,0	1/1:2,12:15:30.07:306,30,0	1/1:5,12:17:51.09:510,51,0	0/0:27,0:27:78.25:0,78,981	0/0:28,0:28:75.23:0,75,931	1/1:2,21:23:51.12:520,51,0	1/1:0,16:16:48.10:484,48,0	1/1:4,29:33:78.18:796,78,0	1/1:2,4:6:18:168,18,0
chr10	34885366	.	A	AT	9974	PASS	AB=1.000;AC=50;AF=0.893;AN=56;BaseQRankSum=-0.456;DP=515;FS=2.750;HRun=1;HaplotypeScore=97.6483;InbreedingCoeff=0.6425;MQ=66.08;MQ0=0;MQRankSum=-0.904;QD=20.19;ReadPosRankSum=1.168;VQSLOD=5.1521;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:37.33:0,37,436	1/1:11,0:11:29.54:188,30,0	0/0:8,0:7:10.20:0,10,78	0/1:9,0:9:28.71:29,0,53	1/1:31,0:31:85.04:555,85,0	1/1:25,0:25:64.83:400,65,0	1/1:10,0:10:29.30:188,29,0	1/1:30,0:30:85.99:622,86,0	1/1:13,0:13:32.31:215,32,0	1/1:19,0:19:52.61:350,53,0	1/1:20,0:20:43.96:384,44,0	1/1:1,17:18:39.06:545,39,0	1/1:11,0:11:29.55:195,30,0	1/1:20,0:20:59.16:389,59,0	1/1:21,0:21:56.21:387,56,0	1/1:27,0:27:77.10:522,77,0	1/1:13,0:13:37.91:225,38,0	0/1:7,0:7:4.08:84,0,4	1/1:27,0:27:79.05:541,79,0	1/1:30,0:30:88.53:578,89,0	1/1:12,0:12:35.54:240,36,0	1/1:25,0:25:72.79:463,73,0	1/1:1,16:17:39.33:616,39,0	1/1:0,16:16:42.14:624,42,0	1/1:18,0:18:50.29:333,50,0	1/1:19,0:20:59.48:437,59,0	1/1:36,0:36:99:700,103,0	1/1:8,0:8:23.68:164,24,0
chr10	34885367	.	TA	T	8680.35	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-7.965;DP=514;FS=12.611;HRun=11;HaplotypeScore=103.2866;InbreedingCoeff=0.8844;MQ=65.97;MQ0=0;MQRankSum=-0.805;QD=20.05;ReadPosRankSum=0.510;VQSLOD=4.2938;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:13,1:14:5.89:0,6,291	1/1:0,11:11:26.97:222,27,0	0/0:8,0:7:0.54:0,1,89	0/0:7,0:8:6.01:0,6,70	1/1:5,25:30:68.91:567,69,0	1/1:0,24:24:65.92:542,66,0	1/1:1,9:10:26.95:220,27,0	1/1:5,24:29:71.87:584,72,0	1/1:3,10:13:9.18:223,9,0	1/1:1,18:19:53.94:443,54,0	1/1:9,12:21:38.91:317,39,0	0/0:18,0:18:40.70:0,41,240	1/1:2,8:10:26.94:218,27,0	1/1:3,18:21:54.40:445,54,0	1/1:5,16:21:47.93:394,48,0	1/1:3,23:26:68.91:566,69,0	1/1:1,12:13:35.96:296,36,0	1/1:2,5:7:16.54:128,17,0	1/1:4,24:28:74.89:613,75,0	1/1:9,21:31:79.90:639,80,0	1/1:2,10:12:29.95:246,30,0	1/1:3,22:25:62.92:517,63,0	0/0:17,0:17:43.57:0,44,244	0/0:16,0:16:40.64:0,41,221	1/1:3,15:18:44.94:369,45,0	1/1:6,13:20:44.92:369,45,0	1/1:11,25:36:63.54:639,64,0	1/1:3,5:8:14.94:123,15,0
chr10	34885641	.	T	TACATCTACATTATTACA	4492.64	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-5.953;DP=601;FS=0.867;HRun=0;HaplotypeScore=243.4405;InbreedingCoeff=0.9378;MQ=64.04;MQ0=0;MQRankSum=-7.242;QD=70.20;ReadPosRankSum=3.062;VQSLOD=4.0008;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:36.12:0,36,1614	0/0:14,0:14:42.12:0,42,1616	0/0:16,0:16:48.16:0,48,1563	0/0:9,0:10:24.07:0,24,988	0/0:30,0:30:90.27:0,90,3927	0/0:26,0:26:78.27:0,78,3708	0/0:10,0:10:24.08:0,24,883	0/0:43,0:43:99:0,123,4149	0/0:12,0:12:36.10:0,36,1303	0/0:33,0:33:99:0,99,4235	0/0:25,0:25:75.21:0,75,2879	1/1:0,7:20:21.07:1783,21,0	0/0:34,0:34:99:0,102,4197	0/0:20,0:20:60.21:0,60,2841	0/0:25,0:25:75.16:0,75,3468	0/0:24,0:24:72.23:0,72,3202	0/0:13,0:13:36.09:0,36,1497	0/0:14,0:14:42.13:0,42,1788	0/0:20,0:20:60.21:0,60,2686	0/0:37,0:37:99:0,111,4976	0/0:12,0:12:36.12:0,36,1657	0/0:28,0:28:81.24:0,81,3845	1/1:0,10:30:30.10:2329,30,0	1/1:2,2:14:6.02:381,6,0	0/0:17,0:17:51.14:0,51,2130	0/0:25,0:25:69.23:0,69,3078	0/0:34,0:33:99:0,99,4211	0/0:3,0:3:9.03:0,9,353
chr10	34886083	.	CACA	C	3088.64	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=12.448;DP=735;FS=6.166;HRun=0;HaplotypeScore=110.9443;InbreedingCoeff=0.9970;MQ=86.03;MQ0=0;MQRankSum=-1.486;QD=37.21;ReadPosRankSum=4.232;VQSLOD=4.6143;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,132,2972	0/0:6,0:6:18.06:0,18,408	0/0:37,0:37:99:0,105,2282	0/0:31,0:31:77.90:0,78,1516	0/0:17,0:17:48.16:0,48,1044	0/0:25,0:25:69.24:0,69,1561	0/0:22,0:22:60.21:0,60,1335	0/0:26,0:25:75.26:0,75,1688	0/0:24,0:24:72.25:0,72,1580	0/0:22,0:22:63.22:0,63,1423	0/0:12,0:12:33.11:0,33,744	1/1:0,31:31:78.27:1284,78,0	0/0:38,0:38:99:0,114,2492	0/0:22,0:22:66.19:0,66,1447	0/0:33,0:33:96.28:0,96,2066	0/0:29,0:29:87.30:0,87,1969	0/0:26,0:26:78.27:0,78,1748	0/0:14,0:14:39.13:0,39,880	0/0:28,0:28:78.26:0,78,1699	0/0:35,0:35:99:0,105,2316	0/0:41,0:41:99:0,117,2583	0/0:18,0:18:54.17:0,54,1180	1/1:1,22:22:54.18:899,54,0	1/1:4,25:29:62.69:1048,63,0	0/0:21,0:21:63.22:0,63,1406	0/0:36,0:36:99:0,108,2422	0/0:30,0:29:90.31:0,90,2017	0/0:13,0:13:39.13:0,39,884
chr10	34886451	.	TA	T	864.16	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=4.805;DP=586;FS=17.752;HRun=1;HaplotypeScore=110.6966;InbreedingCoeff=0.8602;MQ=29.34;MQ0=45;MQRankSum=-0.584;QD=20.10;ReadPosRankSum=0.715;VQSLOD=2.6089;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:16:36.12:0,36,573	0/0:15,0:15:33.11:0,33,526	0/0:22,0:1:3.01:0,3,48	0/0:17,0:1:3.01:0,3,48	0/0:23,0:22:39.13:0,39,621	0/0:36,0:35:93.32:0,93,1482	0/0:15,0:13:21.07:0,21,334	0/0:34,0:29:87.30:0,87,1389	0/0:20,0:15:39.13:0,39,621	0/0:23,0:23:69.20:0,69,1074	0/0:13,0:13:23.25:0,23,380	1/1:2,15:12:24.08:335,24,0	0/0:23,0:22:57.19:0,57,908	0/0:34,0:30:72.25:0,72,1146	0/0:27,0:26:60.20:0,60,956	0/0:29,0:28:69.23:0,69,1089	0/0:15,0:15:15.05:0,15,239	0/0:8,0:7:18.06:0,18,287	0/0:10,0:7:21.04:0,21,308	0/0:22,0:22:54.18:0,54,860	0/0:9,0:7:12.04:0,12,191	0/0:26,0:25:54.18:0,54,860	1/1:1,10:10:27.09:377,27,0	1/1:1,14:12:21.07:293,21,0	0/0:26,0:26:57.19:0,57,908	0/0:26,0:26:78.27:0,78,1244	0/0:42,0:36:78.27:0,78,1242	0/0:10,0:8:15.05:0,15,239
chr10	34888161	.	TG	T	761.80	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.888;DP=632;FS=3.840;HRun=3;HaplotypeScore=66.9247;InbreedingCoeff=0.9046;MQ=91.86;MQ0=0;MQRankSum=-1.864;QD=28.21;ReadPosRankSum=1.169;VQSLOD=2.9347;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,27:27:72.13:857,72,0	0/0:2,0:2:6.02:0,6,86	0/0:32,0:32:57.19:0,57,1168	0/0:20,0:20:57.13:0,57,725	0/0:29,0:29:84.27:0,84,1190	0/0:33,0:33:96.32:0,96,1381	0/0:19,0:19:57.19:0,57,820	0/0:35,0:34:99:0,102,1451	0/0:22,0:22:66.21:0,66,929	0/0:21,0:21:54.18:0,54,764	0/0:34,0:34:96.32:0,96,1371	0/0:16,0:16:48.16:0,48,691	0/0:23,0:23:66.22:0,66,942	0/0:22,0:22:63.20:0,63,889	0/0:23,0:23:69.21:0,69,970	0/0:20,0:20:60.20:0,60,864	0/0:16,0:16:48.16:0,48,691	0/0:10,0:10:30.07:0,30,410	0/0:26,0:26:78.26:0,78,1122	0/0:28,0:28:84.23:0,84,1166	0/0:19,0:19:57.19:0,57,818	0/0:24,0:24:69.23:0,69,993	0/0:21,0:21:63.18:0,63,862	0/0:12,0:12:33.11:0,33,475	0/0:26,0:26:78.26:0,78,1118	0/0:26,0:26:78.26:0,78,1123	0/0:34,0:34:96.32:0,96,1379	0/0:12,0:12:36.12:0,36,518
chr10	34888461	.	TG	T	2904.29	PASS	AB=1.000;AC=41;AF=0.732;AN=56;BaseQRankSum=2.390;DP=500;FS=21.033;HRun=9;HaplotypeScore=133.3543;InbreedingCoeff=0.2296;MQ=70.16;MQ0=1;MQRankSum=-0.377;QD=6.25;ReadPosRankSum=4.719;VQSLOD=0.1828;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:15:17.47:0,17,120	0/0:7,0:7:15.04:0,15,173	0/1:15,0:14:25.49:25,0,83	0/0:13,0:12:6.34:0,6,95	1/1:5,29:34:87.04:793,87,0	1/1:23,0:22:19.53:49,20,0	1/1:16,0:15:11.88:30,12,0	0/1:17,0:17:7.18:7,0,14	1/1:1,19:20:51.03:467,51,0	0/1:24,0:24:5.26:17,0,5	1/1:26,0:26:0.38:30,0,0	1/1:3,16:19:31.85:347,32,0	1/1:20,0:19:22.06:56,22,0	0/1:10,0:9:5.86:12,0,6	1/1:18,0:17:3.12:16,3,0	0/1:19,0:19:14.63:15,0,15	1/1:1,9:10:12.01:110,12,0	0/1:10,0:10:5.61:12,0,6	0/1:15,0:15:0.48:11,0,0	1/1:30,0:30:19.75:53,20,0	0/1:9,0:9:0.65:8,0,1	1/1:16,0:16:5.78:26,6,0	1/1:2,16:17:36.02:330,36,0	1/1:3,21:24:57.03:522,57,0	1/1:24,0:24:22.27:53,22,0	1/1:17,0:17:16.14:38,16,0	1/1:17,0:13:3.25:17,3,0	0/1:14,0:14:3.28:16,0,3
chr10	34888468	.	G	GA	7721.57	PASS	AB=0.857;AC=37;AF=0.661;AN=56;BaseQRankSum=10.265;DP=487;FS=7.654;HRun=0;HaplotypeScore=122.9911;InbreedingCoeff=0.9102;MQ=67.65;MQ0=1;MQRankSum=-4.431;QD=23.91;ReadPosRankSum=1.716;VQSLOD=5.5075;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:5,1:6:36.63:46,0,37	0/0:6,0:6:18.03:0,18,231	0/0:14,0:13:33.06:0,33,293	0/0:14,0:14:11.86:0,12,207	0/0:34,0:34:93.81:0,94,562	1/1:2,18:19:53.95:590,54,0	1/1:2,13:14:25.65:254,26,0	1/1:8,8:16:41.02:346,41,0	0/0:21,0:21:52.64:0,53,303	1/1:5,21:27:49.38:708,49,0	1/1:3,17:26:45.63:529,46,0	0/0:18,0:18:40.89:0,41,239	1/1:0,17:20:49.99:482,50,0	1/1:3,9:10:29.56:243,30,0	1/1:4,15:18:40.47:486,40,0	1/1:5,14:19:53.40:607,53,0	0/0:10,0:10:14.67:0,15,86	1/1:1,8:9:26.25:266,26,0	1/1:6,6:12:27.36:248,27,0	1/1:11,16:27:56.95:551,57,0	1/1:1,9:10:24.05:280,24,0	1/1:6,11:17:42.52:407,43,0	0/0:21,0:20:38.68:0,39,227	0/0:25,0:25:64.50:0,64,393	1/1:4,19:23:62.93:645,63,0	1/1:1,13:14:37.60:377,38,0	1/1:2,15:13:29.65:288,30,0	1/1:1,10:13:33.51:369,34,0
chr10	34888470	.	GT	G	4722.74	PASS	AB=0.986;AC=45;AF=0.804;AN=56;BaseQRankSum=6.069;DP=472;FS=4.391;HRun=1;HaplotypeScore=130.6466;InbreedingCoeff=0.6571;MQ=65.96;MQ0=1;MQRankSum=-4.067;QD=10.86;ReadPosRankSum=8.354;VQSLOD=2.7202;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:6:16.91:0,17,125	0/0:6,0:6:18.05:0,18,222	0/0:12,0:11:15.69:0,16,195	0/0:13,0:12:28.37:0,28,257	1/1:32,2:34:16.43:181,16,0	1/1:20,0:19:52.46:297,52,0	1/1:15,0:14:38.14:226,38,0	1/1:15,0:15:26.43:196,26,0	1/1:20,0:20:18.24:98,18,0	1/1:25,0:25:53.25:337,53,0	1/1:23,1:24:47.48:279,47,0	1/1:17,1:18:24.13:106,24,0	1/1:21,0:20:49.49:277,49,0	1/1:12,0:10:23.39:138,23,0	1/1:18,0:17:28.10:241,28,0	1/1:18,0:18:30.12:237,30,0	0/1:10,0:10:8.69:17,0,9	1/1:9,1:10:26.27:151,26,0	1/1:11,0:11:15.61:151,16,0	1/1:22,2:24:58.25:330,58,0	1/1:10,0:10:22.10:117,22,0	1/1:15,1:16:43.14:246,43,0	0/1:21,1:21:53.17:53,0,66	0/1:27,0:27:73.95:74,0,82	1/1:22,1:23:67.03:392,67,0	1/1:13,1:14:40.48:223,40,0	1/1:16,0:12:30.54:177,31,0	1/1:12,0:12:31.99:178,32,0
chr10	34888471	.	TGGGC	T	11521.79	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=11.482;DP=471;FS=3.316;HRun=0;HaplotypeScore=132.3587;InbreedingCoeff=0.9595;MQ=65.96;MQ0=1;MQRankSum=-6.504;QD=37.78;ReadPosRankSum=1.952;VQSLOD=5.0972;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:6:18.05:0,18,384	0/0:6,0:6:18.06:0,18,421	0/0:11,0:10:1.03:0,1,380	0/0:13,0:12:29.77:0,30,529	0/0:34,0:34:96.26:0,96,1721	1/1:2,18:19:54.18:884,54,0	1/1:3,11:13:36.03:454,36,0	1/1:2,12:14:36:491,36,0	0/0:20,0:20:54.18:0,54,983	1/1:7,18:25:66.06:989,66,0	1/1:9,16:25:59.42:791,59,0	0/0:17,0:17:41.73:0,42,736	1/1:4,17:20:51.11:743,51,0	1/1:4,8:10:24.07:347,24,0	1/1:8,12:19:51.14:799,51,0	1/1:4,14:18:48.16:756,48,0	0/0:10,0:10:15.05:0,15,277	1/1:3,7:10:27.05:411,27,0	1/1:3,8:11:29.98:403,30,0	1/1:2,21:23:60.08:811,60,0	1/1:3,8:11:27.06:394,27,0	1/1:5,11:16:45.09:632,45,0	0/0:22,0:21:50.80:0,51,913	0/0:27,0:27:75.26:0,75,1382	1/1:4,19:23:69.20:1068,69,0	1/1:1,13:14:42:596,42,0	1/1:3,13:12:30.06:423,30,0	1/1:2,10:12:33.11:533,33,0
chr10	34888473	.	GGC	G	1583.27	PASS	AB=0.963;AC=35;AF=0.625;AN=56;BaseQRankSum=15.612;DP=471;FS=3.900;HRun=0;HaplotypeScore=149.5113;InbreedingCoeff=0.8562;MQ=67.86;MQ0=1;MQRankSum=-7.516;QD=5.19;ReadPosRankSum=3.929;VQSLOD=2.8273;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:7:18.03:0,18,302	0/0:6,0:6:18.06:0,18,327	0/0:13,0:12:11.43:0,11,364	0/0:14,0:13:30.07:0,30,484	0/0:34,0:34:96.31:0,96,1653	1/1:20,0:19:44.12:159,44,0	1/1:13,0:12:21.87:67,22,0	1/1:12,0:12:5.12:39,5,0	0/0:20,0:20:54.18:0,54,961	1/1:25,0:25:30.72:166,31,0	0/1:25,1:26:4.56:98,0,5	0/0:16,0:16:41.50:0,42,679	1/1:22,0:20:41.59:151,42,0	1/1:10,0:8:18.33:62,18,0	1/1:22,0:21:6.64:93,7,0	1/1:20,0:20:22.64:111,23,0	0/0:9,0:9:15.05:0,15,258	1/1:8,1:9:19.36:66,19,0	1/1:10,0:10:5.11:51,5,0	1/1:21,2:23:25.28:125,25,0	1/1:12,0:12:2.94:46,3,0	1/1:14,1:15:29.41:103,29,0	0/0:20,0:20:50.92:0,51,920	0/0:27,0:27:75.26:0,75,1367	1/1:22,1:23:52.44:185,52,0	1/1:14,1:15:30.76:108,31,0	1/1:15,0:11:20.72:70,21,0	1/1:13,0:13:27.05:98,27,0
chr10	34888683	.	C	CT	2614.68	PASS	AB=0.735;AC=36;AF=0.643;AN=56;BaseQRankSum=-2.230;DP=569;FS=7.466;HRun=15;HaplotypeScore=83.1036;InbreedingCoeff=0.0179;MQ=61.70;MQ0=5;MQRankSum=0.609;QD=5.28;ReadPosRankSum=-1.427;VQSLOD=1.9839;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:21,2:22:15.93:65,0,16	1/1:1,8:9:17.53:150,18,0	0/1:25,0:12:8.58:13,0,9	0/0:13,0:4:2.84:0,3,17	1/1:4,14:18:20.82:155,21,0	0/1:10,9:18:35.20:53,0,35	0/1:7,6:11:2.61:83,0,3	0/1:15,14:29:12.15:217,0,12	1/1:6,11:17:8.99:76,9,0	1/1:16,14:31:2.76:238,3,0	1/1:13,15:28:19.25:253,19,0	0/0:18,0:17:13.26:0,13,85	1/1:7,11:17:9.87:75,10,0	1/1:15,0:15:24.88:162,25,0	0/1:11,14:24:9.01:42,0,9	1/1:16,5:20:27.17:198,27,0	1/1:14,1:14:7.45:60,7,0	1/1:4,2:6:0.04:22,0,0	0/1:11,1:14:12.84:88,0,13	1/1:10,20:30:20.73:247,21,0	1/1:11,5:15:5.89:39,6,0	0/1:13,5:19:0.23:91,0,0	0/0:20,0:24:10.87:0,11,101	0/0:15,0:19:7.45:0,7,41	0/1:11,16:28:10.75:187,0,11	0/1:14,10:24:23.34:118,0,23	0/1:12,19:27:3.04:77,0,3	0/1:9,7:16:29.71:69,0,30
chr10	34893623	.	G	GGTGTGT	2554.24	PASS	AB=0.882;AC=30;AF=0.625;AN=48;BaseQRankSum=-3.981;DP=474;FS=9.991;HRun=0;HaplotypeScore=119.3870;InbreedingCoeff=0.6113;MQ=65.37;MQ0=11;MQRankSum=-1.498;QD=8.93;ReadPosRankSum=-4.840;VQSLOD=-0.5649;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:25:2.94:0,3,41	1/1:9,0:9:15.05:232,15,0	./.	./.	0/0:9,0:12:8.39:0,8,92	1/1:14,3:19:3.01:96,3,0	1/1:13,0:11:6.02:104,6,0	1/1:31,0:28:5.05:64,5,0	0/0:9,0:12:9.03:0,9,126	1/1:18,0:20:20.17:314,20,0	1/1:6,2:12:3.01:96,3,0	0/0:3,0:12:21.07:0,21,293	1/1:11,0:17:6.02:134,6,0	1/1:9,0:12:8.75:140,9,0	1/1:10,0:10:12.04:180,12,0	1/1:11,4:19:12.04:269,12,0	0/0:17,0:25:24.06:0,24,355	1/1:14,4:20:20.10:436,20,0	./.	1/1:15,0:19:15.05:321,15,0	1/1:17,0:16:9.85:69,10,0	0/1:16,0:18:32.76:33,0,46	0/0:15,0:19:3.90:0,4,44	0/0:7,0:12:12.04:0,12,167	0/1:16,2:19:0:0,0,0	1/1:19,0:20:12.93:228,13,0	0/0:10,1:11:0.38:0,0,1	./.
chr10	34894406	.	G	GA	1425.34	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-4.923;DP=607;FS=12.396;HRun=7;HaplotypeScore=58.8540;InbreedingCoeff=0.9576;MQ=63.69;MQ0=2;MQRankSum=-0.427;QD=29.09;ReadPosRankSum=1.275;VQSLOD=3.4578;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,46:49:99:1520,129,0	0/0:7,0:7:21.02:0,21,197	0/0:17,0:12:17.94:0,18,155	0/0:14,0:13:32.90:0,33,295	0/0:32,0:32:90.13:0,90,863	0/0:20,0:20:57.09:0,57,550	0/0:16,0:16:45.07:0,45,435	0/0:22,0:22:57.07:0,57,543	0/0:10,0:10:30.04:0,30,284	0/0:29,0:29:72.10:0,72,690	0/0:25,0:25:72.08:0,72,678	0/0:15,0:15:42.06:0,42,400	0/0:14,0:14:36.06:0,36,348	0/0:31,0:31:84.08:0,84,794	0/0:31,0:31:84.12:0,84,806	0/0:17,0:17:51.08:0,51,493	0/0:22,0:23:50.60:0,51,495	0/0:28,0:28:72.01:0,72,676	0/0:24,0:24:72.10:0,72,686	0/0:23,0:23:57.08:0,57,550	0/0:4,0:4:12.02:0,12,116	0/0:23,0:23:66.06:0,66,624	0/0:21,0:21:57.07:0,57,542	0/0:18,0:18:48.05:0,48,457	0/0:16,0:16:42.07:0,42,406	0/0:27,0:27:72.11:0,72,695	0/0:39,0:39:99:0,102,978	0/0:12,0:12:33.05:0,33,319
chr10	34894583	.	CA	C	874.53	PASS	AB=0.923;AC=7;AF=0.125;AN=56;BaseQRankSum=7.271;DP=559;FS=11.115;HRun=9;HaplotypeScore=61.4157;InbreedingCoeff=0.8620;MQ=69.45;MQ0=2;MQRankSum=-1.021;QD=15.34;ReadPosRankSum=1.620;VQSLOD=2.6450;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:28:65.89:0,66,347	0/0:5,0:5:15.04:0,15,173	0/0:16,0:14:15.04:0,15,234	0/0:18,0:16:19.94:0,20,267	0/0:24,0:24:63.12:0,63,694	0/0:18,0:18:48.14:0,48,554	0/0:23,1:24:38.73:0,39,700	0/0:26,0:26:66.20:0,66,761	0/0:13,0:13:33.07:0,33,367	0/0:13,0:13:30.09:0,30,346	0/0:27,0:27:73.05:0,73,801	1/1:2,13:15:7.41:322,7,0	0/0:24,0:24:60.17:0,60,684	0/0:23,0:23:66.20:0,66,762	0/0:30,0:30:78.23:0,78,900	0/0:10,0:10:27.08:0,27,311	0/0:40,0:40:99:0,102,1173	0/0:17,0:17:42.12:0,42,485	0/1:11,1:12:0.40:0,0,241	0/0:26,0:26:72.21:0,72,831	0/0:16,0:16:48.13:0,48,545	0/0:11,0:11:27.06:0,27,301	1/1:4,20:24:60.03:548,60,0	1/1:0,6:6:15.01:137,15,0	0/0:17,0:17:48.14:0,48,554	0/0:28,0:28:78.20:0,78,868	0/0:34,0:34:99:0,99,1142	0/0:14,0:14:33.10:0,33,381
chr10	34898467	.	CA	C	2634.27	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-4.547;DP=621;FS=0.402;HRun=8;HaplotypeScore=88.6191;InbreedingCoeff=0.9920;MQ=70.69;MQ0=0;MQRankSum=-1.500;QD=23.95;ReadPosRankSum=3.129;VQSLOD=4.1502;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,26:28:72.11:695,72,0	1/1:1,14:15:42.06:405,42,0	0/0:17,0:17:32.85:0,33,320	0/0:18,0:18:41.77:0,42,434	1/1:1,26:27:69.10:666,69,0	0/0:32,0:32:75.23:0,75,906	0/0:18,0:18:51.16:0,51,616	0/0:30,0:30:81.23:0,81,959	1/1:2,14:16:39.06:377,39,0	0/0:23,0:23:69.13:0,69,799	0/0:21,0:21:60.18:0,60,725	0/0:20,0:20:57.06:0,57,641	0/0:24,0:24:72.22:0,72,867	0/0:34,0:34:99:0,99,1170	0/0:31,0:31:84.26:0,84,1015	0/0:20,0:20:57.17:0,57,678	1/1:0,23:23:69.11:666,69,0	0/0:16,0:16:42.13:0,42,507	0/0:23,0:23:54.15:0,54,634	0/0:23,0:23:63.19:0,63,761	0/0:34,0:34:90.28:0,90,1087	0/0:25,1:26:43.24:0,43,804	0/0:10,0:10:27.08:0,27,326	0/0:19,0:19:51.16:0,51,616	0/0:8,0:8:24.07:0,24,290	0/0:26,0:26:60.16:0,60,704	0/0:34,0:33:93.29:0,93,1121	0/0:4,0:4:12.04:0,12,145
chr10	34899150	.	AC	A	20061.13	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=4.839;DP=685;FS=7.189;HRun=3;HaplotypeScore=166.7457;InbreedingCoeff=0.9111;MQ=61.29;MQ0=4;MQRankSum=7.042;QD=31.54;ReadPosRankSum=6.112;VQSLOD=3.2560;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,53:55:99:1691,138,0	1/1:1,13:14:36.11:446,36,0	0/0:26,0:21:50.95:0,51,638	0/0:23,0:19:41.32:0,41,634	1/1:1,21:20:54.03:630,54,0	1/1:0,13:13:39.10:468,39,0	1/1:0,30:30:81.25:1003,81,0	1/1:2,22:24:66.13:764,66,0	1/1:1,25:26:66.21:818,66,0	1/1:1,25:26:69.21:848,69,0	1/1:0,7:7:18.06:223,18,0	1/1:3,0:25:71.26:791,71,0	1/1:1,40:41:99:1412,114,0	1/1:0,30:30:78.25:966,78,0	1/1:1,34:35:99:1227,99,0	1/1:1,29:30:84.26:1039,84,0	1/1:1,48:49:99:1635,132,0	1/1:1,27:28:78.25:967,78,0	1/1:3,17:18:45.03:497,45,0	1/1:0,13:11:30.09:371,30,0	1/1:0,40:40:99:1214,99,0	1/1:1,23:23:60.14:714,60,0	1/1:3,0:15:22.11:383,22,0	1/1:1,0:16:31.65:317,32,0	1/1:1,18:17:45.14:558,45,0	1/1:1,18:19:51.11:597,51,0	1/1:1,12:13:36.11:446,36,0	1/1:0,2:2:3.01:37,3,0
chr10	34899156	.	A	AC	8913.49	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=7.532;DP=736;FS=6.189;HRun=3;HaplotypeScore=227.2789;InbreedingCoeff=0.9156;MQ=62.90;MQ0=4;MQRankSum=7.118;QD=13.05;ReadPosRankSum=6.127;VQSLOD=3.8039;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:59,0:59:99:614,125,0	1/1:14,0:14:32.42:140,32,0	0/0:27,0:23:44.76:0,45,562	0/0:26,0:22:46.43:0,46,581	1/1:21,0:20:47.65:238,48,0	1/1:16,0:16:42.24:228,42,0	1/1:35,0:35:78.54:417,79,0	1/1:22,0:22:45:233,45,0	1/1:26,0:26:61.81:303,62,0	1/1:28,0:28:57.67:401,58,0	1/1:11,0:11:28.69:171,29,0	1/1:8,22:30:84.19:987,84,0	1/1:43,0:43:99:511,107,0	1/1:32,0:32:54.42:332,54,0	1/1:35,0:35:89.44:440,89,0	1/1:31,0:31:77.11:372,77,0	1/1:49,0:49:99:635,127,0	1/1:30,0:30:76.60:390,77,0	1/1:22,0:20:36.60:179,37,0	1/1:19,0:16:24.22:103,24,0	1/1:40,0:40:95.10:473,95,0	1/1:25,0:24:51.06:247,51,0	1/1:1,19:20:41.05:469,41,0	1/1:2,18:20:30.08:379,30,0	1/1:22,0:20:46.88:238,47,0	1/1:18,0:18:43.59:219,44,0	1/1:14,0:14:36.23:182,36,0	1/1:1,0:1:2.84:14,3,0
chr10	34900559	.	A	AT	4213.42	PASS	AB=0.762;AC=46;AF=0.821;AN=56;BaseQRankSum=-4.425;DP=349;FS=133.678;HRun=8;HaplotypeScore=61.7079;InbreedingCoeff=0.6826;MQ=54.25;MQ0=33;MQRankSum=-6.829;QD=18.81;ReadPosRankSum=-1.325;VQSLOD=-0.6702;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,3:4:5.98:54,6,0	1/1:0,4:3:9.03:104,9,0	0/0:23,0:22:47.96:0,48,427	0/1:16,0:16:1.89:2,0,215	0/1:2,20:13:0.43:234,0,0	1/1:1,7:5:9.03:104,9,0	1/1:2,4:5:8.98:89,9,0	1/1:0,8:3:9.03:104,9,0	1/1:2,4:5:12.04:138,12,0	1/1:0,14:11:33.09:372,33,0	1/1:3,19:15:36.11:414,36,0	0/0:25,0:38:67.31:0,67,514	1/1:1,7:7:21.06:242,21,0	1/1:0,4:3:9.03:104,9,0	1/1:2,17:13:33.10:381,33,0	1/1:0,9:8:22.31:245,22,0	1/1:0,4:3:6.02:69,6,0	1/1:0,6:5:15.04:173,15,0	1/1:2,4:4:12.04:138,12,0	1/1:0,12:10:27.08:311,27,0	1/1:1,2:3:5.73:69,6,0	1/1:1,15:9:27.08:311,27,0	0/0:23,0:34:71.17:0,71,601	0/0:15,0:26:51.24:0,51,393	1/1:0,9:7:18.05:208,18,0	1/1:1,7:6:18.05:208,18,0	1/1:0,7:3:9.03:104,9,0	1/1:0,2:1:3.01:35,3,0
chr10	34901388	.	AT	A	14617.68	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-4.346;DP=707;FS=35.676;HRun=10;HaplotypeScore=71.8569;InbreedingCoeff=0.9085;MQ=75.37;MQ0=0;MQRankSum=-7.119;QD=21.88;ReadPosRankSum=5.551;VQSLOD=3.3595;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,50:61:99:1276,147,0	1/1:1,12:13:32.99:287,33,0	0/0:18,1:19:16.02:0,16,379	0/0:19,1:19:46.87:0,47,463	1/1:4,22:26:59.98:521,60,0	1/1:2,20:22:53.98:469,54,0	1/1:0,12:11:26.99:234,27,0	1/1:7,35:42:99:882,102,0	1/1:1,9:10:23.98:208,24,0	1/1:4,31:35:92.96:804,93,0	1/1:5,26:31:77.97:677,78,0	1/1:2,37:39:80.80:931,81,0	1/1:3,23:26:68.97:599,69,0	1/1:2,19:21:53.99:469,54,0	1/1:1,32:33:89.98:781,90,0	1/1:0,25:25:71.99:625,72,0	1/1:1,24:25:65.99:573,66,0	1/1:6,28:34:74.97:651,75,0	1/1:6,19:23:53.95:464,54,0	1/1:2,31:33:86.96:755,87,0	1/1:2,20:22:56.98:495,57,0	1/1:0,19:20:53.02:449,53,0	1/1:1,17:18:47.99:417,48,0	1/1:5,29:34:47.79:644,48,0	1/1:0,18:18:47.99:417,48,0	1/1:2,17:19:50.99:443,51,0	1/1:2,20:22:59.98:521,60,0	1/1:1,1:2:3:26,3,0
chr10	34902103	.	A	AT	22158.59	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-4.793;DP=633;FS=4.690;HRun=4;HaplotypeScore=97.6066;InbreedingCoeff=0.9895;MQ=66.79;MQ0=0;MQRankSum=-2.775;QD=36.39;ReadPosRankSum=3.317;VQSLOD=4.4567;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,26:26:78.26:1067,78,0	1/1:1,9:10:27.06:349,27,0	0/0:13,0:13:15.41:0,15,246	0/0:11,0:11:29.91:0,30,295	1/1:2,17:19:48.16:655,48,0	1/1:1,27:28:81.27:1108,81,0	1/1:2,19:21:57.15:759,57,0	1/1:2,27:29:75.25:1023,75,0	1/1:3,16:19:48.16:657,48,0	1/1:0,22:22:66.22:898,66,0	1/1:0,22:22:63.17:839,63,0	1/1:1,19:20:54.18:739,54,0	1/1:2,22:24:63.21:862,63,0	1/1:3,20:23:57.19:780,57,0	1/1:5,24:29:72.24:985,72,0	1/1:1,23:24:63.05:861,63,0	1/1:4,22:26:66.22:903,66,0	1/1:3,16:19:54.16:718,54,0	1/1:2,23:25:69.23:944,69,0	1/1:2,31:33:93.27:1250,93,0	1/1:1,20:21:54.18:739,54,0	1/1:3,23:26:69.19:921,69,0	1/1:2,20:22:51.13:673,51,0	1/1:0,18:18:51.17:698,51,0	1/1:2,24:26:69.15:902,69,0	1/1:3,22:25:66.22:903,66,0	1/1:0,45:45:99:1641,120,0	1/1:0,7:7:21.07:287,21,0
chr10	34903413	.	ATC	A	27658.23	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=4.389;DP=709;FS=0.000;HRun=0;HaplotypeScore=155.4396;InbreedingCoeff=0.9840;MQ=70.99;MQ0=0;MQRankSum=-3.717;QD=41.53;ReadPosRankSum=5.808;VQSLOD=5.4128;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,35:35:99:1515,99,0	1/1:0,14:14:36.09:542,36,0	0/0:23,0:22:66.23:0,66,1221	0/0:20,0:17:48.03:0,48,806	1/1:0,37:37:99:1533,102,0	1/1:0,30:30:87.30:1332,87,0	1/1:0,29:29:87.30:1332,87,0	1/1:0,34:34:99:1493,102,0	1/1:0,25:25:72.24:1102,72,0	1/1:0,30:30:84.27:1266,84,0	1/1:1,17:18:45.15:688,45,0	1/1:0,25:25:63.21:964,63,0	1/1:0,24:24:66.22:1011,66,0	1/1:0,17:17:51.17:781,51,0	1/1:1,33:34:90.31:1378,90,0	1/1:0,26:26:66.22:1011,66,0	1/1:2,17:19:48.16:732,48,0	1/1:0,14:14:42.14:636,42,0	1/1:0,29:29:87.30:1333,87,0	1/1:0,21:21:57.19:871,57,0	1/1:1,18:19:45.15:689,45,0	1/1:0,28:28:78.22:1166,78,0	1/1:0,32:32:72.23:1091,72,0	1/1:0,16:16:45.15:689,45,0	1/1:0,37:37:99:1652,108,0	1/1:1,32:33:93.27:1359,93,0	1/1:2,34:36:90.26:1377,90,0	1/1:3,1:4:11.98:115,12,0
chr10	34903722	.	GTTA	G	11523.12	PASS	AB=0.571;AC=49;AF=0.907;AN=54;BaseQRankSum=7.408;DP=365;FS=176.430;HRun=0;HaplotypeScore=161.1672;InbreedingCoeff=0.6725;MQ=63.94;MQ0=11;MQRankSum=-8.480;QD=37.91;ReadPosRankSum=5.137;VQSLOD=1.1074;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,15:16:36.12:633,36,0	1/1:0,5:5:15.05:264,15,0	0/0:27,0:14:38.90:0,39,693	0/0:32,0:26:47.45:0,47,969	1/1:0,15:15:42.14:669,42,0	1/1:1,15:15:39.13:682,39,0	1/1:6,12:15:26.68:469,27,0	1/1:0,12:9:24.06:394,24,0	1/1:1,10:10:27.09:475,27,0	1/1:1,10:10:24.03:388,24,0	1/1:0,10:10:18.06:316,18,0	1/1:5,12:14:33.11:580,33,0	1/1:0,13:13:30.10:527,30,0	1/1:0,13:11:18.06:316,18,0	1/1:0,12:12:36.12:633,36,0	1/1:0,14:14:39.13:686,39,0	1/1:0,6:6:15.05:261,15,0	1/1:1,3:4:6.02:106,6,0	1/1:5,10:8:21.07:370,21,0	1/1:0,9:9:21.07:367,21,0	1/1:1,2:3:3.01:36,3,0	1/1:0,15:15:36.12:632,36,0	1/1:2,18:19:42.14:736,42,0	0/1:3,9:11:49.72:294,0,50	1/1:0,11:11:27.09:473,27,0	1/1:0,9:9:27.09:475,27,0	1/1:0,17:17:42.14:739,42,0	./.
chr10	34905861	.	A	AG	4830.07	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=1.477;DP=301;FS=3.656;HRun=1;HaplotypeScore=35.5118;InbreedingCoeff=0.5134;MQ=42.22;MQ0=50;MQRankSum=-1.373;QD=18.37;ReadPosRankSum=3.143;VQSLOD=5.2718;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,11:9:21.07:314,21,0	1/1:1,3:1:3.01:45,3,0	0/0:16,0:3:9.03:0,9,114	0/0:22,0:5:12.04:0,12,155	1/1:1,10:5:9.03:135,9,0	1/1:0,17:7:15.05:224,15,0	1/1:0,7:4:6.02:79,6,0	1/1:1,11:1:2.98:21,3,0	1/1:2,7:7:18.02:244,18,0	1/1:2,12:8:21.07:302,21,0	1/1:2,4:3:9.03:134,9,0	1/1:0,17:6:18.06:269,18,0	1/1:1,9:6:12.04:179,12,0	1/1:0,11:6:15.05:224,15,0	1/1:0,15:9:24.08:359,24,0	1/1:1,5:3:6.02:90,6,0	1/1:0,10:4:12.04:179,12,0	1/1:0,4:4:9.03:135,9,0	1/1:1,6:3:9.03:135,9,0	1/1:2,17:9:21.07:314,21,0	1/1:0,4:3:9.03:135,9,0	1/1:3,8:6:11.87:148,12,0	1/1:0,8:6:15.05:224,15,0	1/1:1,7:5:9.03:135,9,0	1/1:0,8:3:6.02:90,6,0	1/1:2,15:10:21.07:314,21,0	1/1:2,11:11:24.08:359,24,0	1/1:0,3:2:3.01:45,3,0
chr10	34907663	.	T	TTG	118.94	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.421;DP=728;FS=13.116;HRun=0;HaplotypeScore=79.5933;InbreedingCoeff=0.9662;MQ=56.59;MQ0=12;MQRankSum=-3.317;QD=6.61;ReadPosRankSum=-0.752;VQSLOD=1.9133;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,14:8:12.04:205,12,0	0/0:8,0:8:24.08:0,24,368	0/0:18,0:17:42.08:0,42,557	0/0:24,0:19:48.11:0,48,657	0/0:25,0:25:75.22:0,75,1101	0/0:34,0:33:96.33:0,96,1468	0/0:16,0:16:42.14:0,42,641	0/0:41,0:41:99:0,123,1870	0/0:31,0:30:87.30:0,87,1325	0/0:38,0:38:99:0,111,1657	0/0:27,0:26:78.24:0,78,1152	0/0:31,3:31:84.25:0,84,1221	0/0:29,0:29:87.23:0,87,1265	0/0:35,0:35:99:0,102,1557	0/0:30,0:30:87.30:0,87,1331	0/0:28,0:28:81.26:0,81,1214	0/0:20,0:19:54.17:0,54,803	0/0:18,0:17:48.13:0,48,710	0/0:20,0:18:51.13:0,51,733	0/0:21,0:21:63.20:0,63,939	0/0:31,0:29:87.26:0,87,1285	0/0:30,0:30:84.29:0,84,1282	0/0:27,0:26:78.25:0,78,1168	0/0:17,1:16:42.11:0,42,601	0/0:27,0:27:81.22:0,81,1173	0/0:38,0:38:99:0,114,1718	0/0:30,0:30:90.31:0,90,1368	0/0:11,0:11:33.11:0,33,505
chr10	34909766	.	CA	C	1740.41	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.804;DP=586;FS=2.710;HRun=1;HaplotypeScore=54.5391;InbreedingCoeff=0.9945;MQ=88.12;MQ0=0;MQRankSum=-0.926;QD=33.47;ReadPosRankSum=2.121;VQSLOD=3.4320;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:66.20:0,66,1007	0/0:6,0:6:18.06:0,18,288	0/0:23,0:23:57.49:0,57,911	0/0:18,0:18:47.84:0,48,661	0/0:21,0:21:63.21:0,63,1007	0/0:25,0:25:75.22:0,75,1149	0/0:7,0:7:21.07:0,21,336	0/0:30,0:30:90.28:0,90,1371	0/0:20,0:20:60.20:0,60,950	0/0:20,0:20:60.20:0,60,939	0/0:26,0:26:78.27:0,78,1233	1/1:0,18:18:45.15:627,45,0	0/0:27,0:27:78.25:0,78,1223	0/0:22,0:22:66.18:0,66,984	0/0:20,0:20:60.19:0,60,935	0/0:23,0:23:69.16:0,69,987	0/0:30,0:30:90.28:0,90,1387	0/0:14,0:14:42.14:0,42,670	0/0:28,0:28:84.25:0,84,1260	0/0:26,0:26:78.25:0,78,1223	0/0:20,0:20:60.18:0,60,931	0/0:12,0:12:36.12:0,36,575	1/1:1,22:23:63.21:878,63,0	1/1:0,11:11:27.09:377,27,0	0/0:25,0:25:75.26:0,75,1183	0/0:26,0:26:78.25:0,78,1198	0/0:35,0:35:99:0,105,1597	0/0:8,0:8:24.08:0,24,383
chr10	34911306	.	GA	G	1566.14	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=11.140;DP=602;FS=5.995;HRun=6;HaplotypeScore=61.2555;InbreedingCoeff=0.9995;MQ=78.25;MQ0=0;MQRankSum=0.132;QD=24.09;ReadPosRankSum=1.921;VQSLOD=3.3440;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:57.12:0,57,714	0/0:13,0:13:39.13:0,39,513	0/0:17,0:17:42.12:0,42,519	0/0:12,0:12:29.50:0,29,325	0/0:23,0:23:69.21:0,69,881	0/0:22,0:22:57.19:0,57,750	0/0:14,0:13:36.12:0,36,474	0/0:31,0:31:87.27:0,87,1132	0/0:29,0:29:69.22:0,69,908	0/0:32,1:33:46.01:0,46,955	0/0:24,0:24:69.22:0,69,894	1/1:2,15:17:42.11:451,42,0	0/0:27,0:27:81.25:0,81,1043	0/0:12,0:12:33.09:0,33,419	0/0:35,0:35:96.31:0,96,1263	0/0:23,0:23:69.22:0,69,907	0/0:24,0:24:69.20:0,69,891	0/0:12,0:12:36.12:0,36,474	0/0:24,0:24:66.21:0,66,868	0/0:26,0:26:72.22:0,72,933	0/0:12,0:12:36.12:0,36,474	0/0:17,0:17:48.16:0,48,629	1/1:1,28:29:75.19:806,75,0	1/1:2,17:19:42.11:451,42,0	0/0:26,0:26:69.20:0,69,891	0/0:25,0:25:72.18:0,72,915	0/0:20,0:20:54.16:0,54,695	0/0:16,0:16:48.16:0,48,632
chr10	34911381	.	A	AACACAC	7319.21	PASS	AB=0.866;AC=43;AF=0.827;AN=52;BaseQRankSum=-5.107;DP=659;FS=0.855;HRun=0;HaplotypeScore=185.1904;InbreedingCoeff=0.4355;MQ=58.99;MQ0=8;MQRankSum=-1.228;QD=12.98;ReadPosRankSum=-2.999;VQSLOD=3.8344;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:17,6:26:4.09:238,4,0	0/0:17,0:17:9.36:0,9,302	./.	0/1:29,0:24:0:0,0,0	1/1:12,7:23:5.88:121,6,0	1/1:8,5:19:15.05:370,15,0	1/1:15,6:24:12.04:205,12,0	1/1:33,0:32:26.78:284,27,0	1/1:9,15:29:15.03:402,15,0	1/1:28,1:28:29.86:528,30,0	0/1:7,9:18:0:0,0,0	0/1:22,0:22:7.30:7,0,142	1/1:12,5:21:8.49:280,8,0	0/1:10,3:16:55.66:83,0,56	1/1:21,14:40:14.14:346,14,0	1/1:14,10:25:9.03:224,9,0	1/1:12,1:26:15:283,15,0	1/1:7,2:10:15.04:269,15,0	1/1:13,5:19:21.54:519,22,0	1/1:17,1:24:17.97:409,18,0	./.	1/1:8,7:19:11.99:300,12,0	0/0:16,0:16:3.19:0,3,135	0/1:22,0:23:0.12:0,0,75	1/1:9,5:17:6.02:126,6,0	1/1:14,12:32:57.13:1211,57,0	1/1:8,12:22:31.46:801,31,0	1/1:7,4:11:12.88:311,13,0
chr10	34911411	.	CACACAT	C	1366.24	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=1.297;DP=710;FS=2.995;HRun=0;HaplotypeScore=180.4360;InbreedingCoeff=0.8167;MQ=49.69;MQ0=12;MQRankSum=1.355;QD=15.53;ReadPosRankSum=0.466;VQSLOD=3.0113;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:31:36.86:0,37,502	0/1:15,0:15:15.87:16,0,433	0/0:24,0:4:11.65:0,12,84	0/0:36,0:11:26.07:0,26,216	0/0:24,0:24:26.99:0,27,326	0/0:20,0:20:18.03:0,18,397	0/0:25,0:24:23.90:0,24,248	0/0:30,0:29:75.20:0,75,964	0/0:46,0:46:68.25:0,68,906	0/0:28,0:27:72.52:0,73,1157	0/0:18,0:18:17.92:0,18,141	1/1:6,19:25:21.05:386,21,0	0/0:28,0:28:51.15:0,51,615	0/0:18,0:17:23.87:0,24,284	0/0:35,0:35:48:0,48,754	0/0:27,0:26:41.86:0,42,396	0/0:26,0:26:32.72:0,33,522	0/0:12,0:12:16.60:0,17,282	0/0:18,0:18:50.97:0,51,844	0/0:29,0:28:46.39:0,46,516	0/0:34,0:34:32.46:0,32,262	0/0:22,0:22:35.70:0,36,562	1/1:10,7:16:35.73:556,36,0	1/1:26,5:31:44.98:556,45,0	0/0:20,0:20:33.01:0,33,505	0/0:34,0:34:72.01:0,72,1324	0/0:26,0:26:41.26:0,41,666	0/0:8,0:8:15.85:0,16,223
chr10	34912321	.	GATGCAGGCTTTTTC	G	4990.57	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=10.835;DP=634;FS=17.923;HRun=0;HaplotypeScore=244.6147;InbreedingCoeff=0.9734;MQ=83.48;MQ0=0;MQRankSum=-10.684;QD=94.16;ReadPosRankSum=0.149;VQSLOD=2.9190;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,108,6955	0/0:7,0:7:21.07:0,21,1380	0/0:17,0:17:48.16:0,48,2807	0/0:22,0:22:63.20:0,63,3300	0/0:19,0:19:57.20:0,57,3930	0/0:22,0:22:60.21:0,60,4182	0/0:20,0:20:57.20:0,57,3888	0/0:33,0:33:96.31:0,96,5501	0/0:24,0:24:72.25:0,72,4852	0/0:27,0:27:78.27:0,78,5132	0/0:33,0:33:87.30:0,87,5653	1/1:2,24:26:75.24:3009,75,0	0/0:24,0:24:72.25:0,72,4765	0/0:27,0:27:81.26:0,81,5218	0/0:25,0:25:72.25:0,72,4536	0/0:21,0:21:63.22:0,63,4245	0/0:18,0:18:54.19:0,54,3489	0/0:13,0:13:39.13:0,39,2508	0/0:20,0:20:60.16:0,60,2947	0/0:29,0:29:87.30:0,87,6054	0/0:19,0:19:57.20:0,57,3938	0/0:31,0:31:90.29:0,90,5628	1/1:0,18:18:47.94:1599,48,0	1/1:4,5:8:8.77:383,9,0	0/0:28,0:28:84.29:0,84,5196	0/0:29,0:29:84.29:0,84,5528	0/0:31,0:31:93.32:0,93,6482	0/0:6,0:6:18.06:0,18,1172
chr10	34912392	.	G	GT	1950.40	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=1.911;DP=613;FS=4.125;HRun=3;HaplotypeScore=71.4873;InbreedingCoeff=0.9778;MQ=81.94;MQ0=0;MQRankSum=-5.165;QD=30.01;ReadPosRankSum=-0.064;VQSLOD=3.1909;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,105,1234	0/0:8,0:8:24.07:0,24,288	0/0:18,0:18:45.04:0,45,496	0/0:18,0:18:51.15:0,51,600	0/0:27,0:27:78.24:0,78,934	0/0:27,0:27:72.22:0,72,863	0/0:17,0:17:45.12:0,45,528	0/0:37,0:37:96.29:0,96,1152	0/0:17,0:17:48.13:0,48,563	0/0:26,0:26:75.22:0,75,892	0/0:16,0:16:48.15:0,48,575	1/1:3,29:32:84.08:1067,84,0	0/0:19,0:19:54.16:0,54,647	0/0:24,0:24:66.20:0,66,791	0/0:39,0:39:99:0,108,1295	0/0:23,0:23:63.19:0,63,756	0/0:26,0:26:78.21:0,78,922	0/0:8,0:8:24.07:0,24,288	0/0:10,0:10:29.92:0,30,324	0/0:28,0:28:84.22:0,84,973	0/0:37,0:37:99:0,111,1330	0/0:14,0:14:36.11:0,36,432	1/1:4,13:17:42.10:564,42,0	1/1:2,14:16:33.11:462,33,0	0/0:17,0:17:42.13:0,42,504	0/0:29,0:29:84.26:0,84,1006	0/0:24,0:24:69.21:0,69,827	0/0:3,0:3:9.03:0,9,108
chr10	34912695	.	GA	G	929.57	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=7.818;DP=572;FS=7.215;HRun=8;HaplotypeScore=59.6072;InbreedingCoeff=0.9615;MQ=64.20;MQ0=0;MQRankSum=-4.375;QD=20.21;ReadPosRankSum=0.875;VQSLOD=3.5918;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:57.17:0,57,685	0/0:11,0:11:28.89:0,29,360	0/0:20,0:20:39.12:0,39,466	0/0:22,0:19:26.97:0,27,465	0/0:32,0:32:93.29:0,93,1123	0/0:19,0:19:37.33:0,37,622	0/0:10,0:10:27.06:0,27,313	0/0:29,0:29:81.24:0,81,967	0/0:22,0:22:51.16:0,51,616	0/0:32,0:32:78.24:0,78,939	0/0:30,0:30:87.27:0,87,1048	1/1:3,14:17:42.06:406,42,0	0/0:15,0:15:42.13:0,42,507	0/0:17,0:17:51.16:0,51,616	0/0:30,0:30:78.24:0,78,942	0/0:14,0:14:36.11:0,36,435	0/0:29,0:29:72.22:0,72,869	0/0:15,0:16:28.55:0,29,379	0/0:21,0:21:51.16:0,51,616	0/0:38,0:38:99:0,108,1305	0/0:10,0:10:30.07:0,30,348	0/0:15,0:15:39.12:0,39,471	1/1:2,15:17:45.07:434,45,0	1/1:2,10:12:24.04:232,24,0	0/0:21,0:21:54.15:0,54,639	0/0:25,0:25:69.21:0,69,834	0/0:25,0:25:72.22:0,72,868	0/0:2,0:2:6.02:0,6,72
chr10	34913960	.	TAA	T	3233.06	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=11.202;DP=692;FS=2.121;HRun=2;HaplotypeScore=82.6941;InbreedingCoeff=0.9957;MQ=94.00;MQ0=0;MQRankSum=-4.100;QD=41.45;ReadPosRankSum=1.217;VQSLOD=3.7870;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:51:99:0,156,3052	0/0:7,0:7:21.07:0,21,427	0/0:34,0:34:99:0,102,2050	0/0:27,0:27:81.22:0,81,1563	0/0:24,0:24:72.25:0,72,1462	0/0:18,0:18:54.19:0,54,1097	0/0:23,0:23:69.24:0,69,1402	0/0:35,0:35:99:0,105,2131	0/0:19,0:19:57.20:0,57,1146	0/0:23,0:23:69.23:0,69,1371	0/0:19,0:19:54.19:0,54,1088	1/1:0,22:22:59.96:979,60,0	0/0:26,0:26:78.25:0,78,1539	0/0:23,0:23:69.24:0,69,1401	0/0:20,0:20:60.19:0,60,1183	0/0:21,0:21:63.22:0,63,1276	0/0:27,0:27:81.28:0,81,1632	0/0:24,0:24:72.14:0,72,1393	0/0:20,0:20:60.21:0,60,1220	0/0:37,0:37:99:0,111,2256	0/0:36,0:36:99:0,108,2195	0/0:26,0:26:78.25:0,78,1544	1/1:0,26:26:66.23:1077,66,0	1/1:0,30:30:81.28:1322,81,0	0/0:15,0:15:45.15:0,45,904	0/0:25,0:25:75.26:0,75,1524	0/0:27,0:27:81.28:0,81,1636	0/0:6,0:6:18.06:0,18,366
chr10	34914346	.	GTA	G	3440.66	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=11.189;DP=577;FS=15.838;HRun=0;HaplotypeScore=64.4917;InbreedingCoeff=0.9958;MQ=75.47;MQ0=0;MQRankSum=-1.227;QD=39.10;ReadPosRankSum=2.177;VQSLOD=4.5511;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,16:17:42.14:643,42,0	0/0:9,0:9:27.09:0,27,508	0/0:13,0:13:36.12:0,36,692	0/0:8,0:8:24.06:0,24,412	1/1:1,24:25:69.23:1055,69,0	0/0:25,0:24:75.24:0,75,1414	0/0:13,0:13:39.13:0,39,752	0/0:36,0:36:99:0,105,1986	1/1:1,19:20:45.15:688,45,0	0/0:24,0:24:72.25:0,72,1384	0/0:17,0:17:51.16:0,51,950	0/0:24,0:24:72.25:0,72,1390	0/0:30,0:30:90.31:0,90,1736	0/0:14,0:14:39.13:0,39,741	0/0:26,0:26:78.25:0,78,1472	0/0:20,1:21:17.29:0,17,1067	1/1:0,26:26:69.23:1055,69,0	0/0:19,0:19:57.14:0,57,1012	0/0:12,0:12:36.12:0,36,684	0/0:34,0:34:99:0,102,1900	0/0:18,0:18:54.19:0,54,1029	0/0:20,0:20:60.21:0,60,1157	0/0:18,0:18:54.16:0,54,997	0/0:8,0:8:24.08:0,24,463	0/0:29,0:29:87.30:0,87,1671	0/0:22,0:22:60.20:0,60,1128	0/0:37,0:37:99:0,111,2108	0/0:12,0:12:36.02:0,36,507
chr10	34915439	.	A	AG	1416.54	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-7.966;DP=585;FS=5.759;HRun=7;HaplotypeScore=59.6846;InbreedingCoeff=0.9874;MQ=81.90;MQ0=0;MQRankSum=-3.653;QD=28.33;ReadPosRankSum=2.258;VQSLOD=4.4883;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:33:0,33,309	0/0:9,0:9:24.02:0,24,226	0/0:18,0:17:44.94:0,45,420	0/0:17,0:17:45.07:0,45,431	0/0:32,0:32:81.10:0,81,769	0/0:23,0:23:66.11:0,66,637	0/0:18,0:18:54.08:0,54,517	0/0:25,0:25:54.07:0,54,521	0/0:18,0:18:51.08:0,51,492	0/0:32,0:32:93.13:0,93,891	0/0:20,0:20:51.06:0,51,485	1/1:1,17:18:48.15:580,48,0	0/0:26,0:26:72.11:0,72,695	0/0:24,0:24:69.11:0,69,666	0/0:23,0:23:66.10:0,66,637	0/0:26,0:26:75.07:0,75,710	0/0:21,0:21:54.07:0,54,515	0/0:5,0:5:15.02:0,15,145	0/0:23,0:23:60.04:0,60,561	0/0:32,0:32:93.12:0,93,881	0/0:24,0:24:60.08:0,60,578	0/0:20,0:20:48.06:0,48,463	1/1:0,24:24:66.03:796,66,0	1/1:3,5:8:15.05:181,15,0	0/0:16,0:16:48.08:0,48,463	0/0:29,0:29:81.13:0,81,782	0/0:30,0:29:87.14:0,87,840	0/0:12,0:12:26.98:0,27,241
chr10	34915701	.	ATGTGTGTGTG	A	6514.52	PASS	AB=0.930;AC=33;AF=0.589;AN=56;BaseQRankSum=4.040;DP=626;FS=15.652;HRun=0;HaplotypeScore=176.4560;InbreedingCoeff=0.6157;MQ=66.12;MQ0=14;MQRankSum=-5.228;QD=16.13;ReadPosRankSum=1.123;VQSLOD=2.9186;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:36:51.17:0,51,2077	0/0:5,0:5:6.02:0,6,286	0/0:27,0:21:6.01:0,6,92	0/0:28,0:19:3.01:0,3,41	0/0:18,0:18:15.02:0,15,458	1/1:7,9:18:21.07:586,21,0	1/1:18,7:26:9.03:230,9,0	0/1:24,0:24:15.77:66,0,16	0/0:13,0:23:24.33:0,24,795	1/1:16,6:22:14.49:343,14,0	1/1:13,7:20:15.05:444,15,0	0/0:13,0:17:6.02:0,6,277	1/1:11,4:18:18.06:477,18,0	1/1:19,8:26:15.05:445,15,0	1/1:9,5:14:3.01:89,3,0	1/1:14,10:25:18.11:516,18,0	0/0:16,0:27:26.68:0,27,1012	0/1:18,1:19:99:255,0,145	1/1:17,3:21:4.61:216,5,0	1/1:20,12:34:27.09:745,27,0	1/1:36,0:34:23.93:328,24,0	1/1:13,8:20:12.04:357,12,0	0/0:8,0:12:6.02:0,6,280	0/0:14,0:28:21.07:0,21,930	1/1:6,1:10:9.03:208,9,0	0/1:21,5:26:15.60:406,0,16	1/1:19,4:25:15.05:407,15,0	1/1:7,7:15:15.05:397,15,0
chr10	34917663	.	A	ATTAC	4315.89	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-9.674;DP=655;FS=1.084;HRun=0;HaplotypeScore=105.5815;InbreedingCoeff=0.9939;MQ=76.66;MQ0=0;MQRankSum=-3.381;QD=56.79;ReadPosRankSum=1.008;VQSLOD=6.0404;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:51.15:0,51,915	0/0:5,0:5:15.05:0,15,285	0/0:21,0:21:60.14:0,60,948	0/0:30,0:29:57.12:0,57,1158	0/0:26,0:26:72.25:0,72,1346	0/0:29,0:28:84.29:0,84,1586	0/0:13,0:13:39.13:0,39,740	0/0:33,0:33:84.29:0,84,1567	0/0:17,0:17:45.09:0,45,745	0/0:30,0:30:87.30:0,87,1622	0/0:35,0:35:99:0,105,1911	1/1:3,19:22:51.17:1292,51,0	0/0:18,0:18:51.17:0,51,957	0/0:20,0:20:60.21:0,60,1128	0/0:17,0:17:48.16:0,48,887	0/0:24,0:24:72.23:0,72,1303	0/0:31,0:31:90.31:0,90,1689	0/0:23,0:23:63.22:0,63,1177	0/0:17,0:17:48.16:0,48,867	0/0:42,0:42:99:0,123,2201	0/0:14,0:14:39.10:0,39,704	0/0:29,0:29:81.28:0,81,1529	1/1:2,30:33:72.16:1809,72,0	1/1:0,20:20:45.63:1215,46,0	0/0:28,0:28:84.29:0,84,1592	0/0:23,0:23:63.22:0,63,1196	0/0:26,0:26:78.27:0,78,1448	0/0:9,0:9:27.09:0,27,513
chr10	34919359	.	A	AT	1686.64	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-11.046;DP=656;FS=1.138;HRun=7;HaplotypeScore=58.7112;InbreedingCoeff=0.9836;MQ=75.75;MQ0=0;MQRankSum=-0.955;QD=29.08;ReadPosRankSum=1.115;VQSLOD=4.2795;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:78.12:0,78,753	0/0:9,0:9:24.04:0,24,232	0/0:17,0:17:31.76:0,32,286	0/0:11,0:11:23.82:0,24,229	0/0:46,0:46:99:0,129,1234	0/0:17,0:17:48.08:0,48,463	0/0:14,0:14:36.06:0,36,348	0/0:45,0:45:99:0,108,1038	0/0:22,0:22:63.09:0,63,603	0/0:31,0:31:87.14:0,87,840	0/0:24,0:24:63.10:0,63,608	1/1:4,18:22:28.20:623,28,0	0/0:27,0:27:78.12:0,78,753	0/0:38,0:38:99:0,108,1037	0/0:27,0:27:81.12:0,81,777	0/0:14,0:14:36.06:0,36,348	0/0:22,0:22:60.07:0,60,572	0/0:21,0:21:48.07:0,48,463	0/0:17,0:17:48.07:0,48,464	0/0:39,0:39:99:0,108,1038	0/0:6,0:6:18.03:0,18,174	0/0:33,0:33:87.13:0,87,840	1/1:0,21:21:63.19:761,63,0	1/1:1,14:15:13.15:442,13,0	0/0:22,0:22:63.09:0,63,603	0/0:28,0:28:81.12:0,81,778	0/0:32,0:31:81.11:0,81,782	0/0:6,0:6:18.03:0,18,173
chr10	34921325	.	GT	G	2244.82	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=11.976;DP=740;FS=2.334;HRun=1;HaplotypeScore=76.6130;InbreedingCoeff=0.9987;MQ=87.63;MQ0=0;MQRankSum=-0.706;QD=33.01;ReadPosRankSum=0.606;VQSLOD=3.4080;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,111,1678	0/0:8,0:8:24.08:0,24,374	0/0:28,0:28:81.22:0,81,1133	0/0:26,0:26:71.06:0,71,1024	0/0:20,0:20:60.19:0,60,909	0/0:26,0:26:78.24:0,78,1175	0/0:21,0:21:63.21:0,63,974	0/0:48,0:48:99:0,141,2024	0/0:38,0:38:99:0,114,1735	0/0:30,0:30:87.29:0,87,1342	0/0:21,0:21:63.18:0,63,937	1/1:0,29:29:84.28:1174,84,0	0/0:26,0:26:75.22:0,75,1126	0/0:30,0:30:90.29:0,90,1381	0/0:30,0:30:90.28:0,90,1384	0/0:36,0:36:99:0,108,1620	0/0:36,0:36:99:0,108,1664	0/0:12,0:12:36.05:0,36,511	0/0:11,0:11:33.10:0,33,494	0/0:29,0:29:87.27:0,87,1317	0/0:39,0:39:99:0,114,1753	0/0:26,0:26:75.24:0,75,1150	1/1:0,19:19:48.16:669,48,0	1/1:0,20:20:39.13:545,39,0	0/0:33,0:33:99:0,99,1527	0/0:33,0:33:99:0,99,1494	0/0:19,0:19:57.13:0,57,801	0/0:9,0:9:27.09:0,27,418
chr10	34922980	.	CT	C	6800.24	PASS	AB=0.609;AC=44;AF=0.786;AN=56;BaseQRankSum=3.805;DP=281;FS=21.273;HRun=3;HaplotypeScore=41.8409;InbreedingCoeff=0.7328;MQ=52.73;MQ0=8;MQRankSum=-1.239;QD=30.22;ReadPosRankSum=0.478;VQSLOD=2.8543;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,10:11:8.13:325,8,0	0/1:5,6:10:55.38:220,0,55	0/0:11,0:4:9.03:0,9,118	0/0:13,0:4:11.97:0,12,137	1/1:2,10:12:33.06:390,33,0	1/1:1,8:8:24.08:297,24,0	1/1:0,10:10:27.08:335,27,0	1/1:1,9:9:27.03:306,27,0	1/1:1,8:9:24.08:296,24,0	1/1:2,9:10:30.09:362,30,0	1/1:2,6:8:18.05:217,18,0	0/0:9,0:9:21.07:0,21,302	1/1:2,5:7:21.04:234,21,0	1/1:0,14:14:42.13:519,42,0	1/1:0,14:14:29.98:370,30,0	1/1:0,7:7:18.06:222,18,0	1/1:1,6:7:17.99:198,18,0	1/1:0,6:6:18.06:223,18,0	1/1:0,6:6:15.05:186,15,0	1/1:2,12:14:36.10:433,36,0	1/1:2,9:11:24.04:270,24,0	0/1:2,6:8:20.18:201,0,20	0/0:16,0:15:42.14:0,42,601	0/0:7,0:7:21.07:0,21,300	1/1:1,13:10:30.09:371,30,0	1/1:3,7:9:24.07:286,24,0	1/1:1,11:12:36.10:433,36,0	1/1:1,3:3:9.03:106,9,0
chr10	34923016	.	T	TC	821.47	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=2.249;DP=268;FS=5.204;HRun=5;HaplotypeScore=50.0543;InbreedingCoeff=0.7545;MQ=62.05;MQ0=5;MQRankSum=-1.805;QD=22.82;ReadPosRankSum=-1.403;VQSLOD=2.2325;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,8:11:24:279,24,0	0/0:10,0:9:15:0,15,149	0/0:12,0:5:2.98:0,3,27	0/0:14,0:6:6.49:0,6,65	1/1:4,11:15:33.42:430,33,0	0/0:7,0:7:21.05:0,21,226	0/0:12,0:12:30.08:0,30,322	0/0:20,1:19:39.09:0,39,413	1/1:3,5:8:18.04:220,18,0	0/0:8,0:7:17.96:0,18,178	0/0:5,0:5:12.03:0,12,129	0/0:6,0:6:18.05:0,18,193	0/0:5,0:5:12.03:0,12,128	0/0:10,0:9:24.06:0,24,258	0/0:12,0:12:14.64:0,15,161	0/0:6,0:6:15.04:0,15,161	1/1:1,1:2:3.01:39,3,0	0/0:4,0:4:12.03:0,12,129	0/0:2,0:1:3.01:0,3,32	0/0:18,0:18:51.13:0,51,548	0/0:12,0:12:27.07:0,27,290	0/0:7,0:7:18.04:0,18,191	0/0:17,0:15:42.09:0,42,443	0/0:9,0:9:21.04:0,21,218	0/0:12,0:11:29.10:0,29,296	0/0:9,0:8:24.06:0,24,258	0/0:10,0:10:30.07:0,30,320	0/0:2,0:1:3.01:0,3,32
chr10	34925229	.	T	TA	1867.20	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=1.211;DP=334;FS=16.240;HRun=0;HaplotypeScore=79.7609;InbreedingCoeff=0.8252;MQ=61.72;MQ0=0;MQRankSum=0.188;QD=26.30;ReadPosRankSum=1.115;VQSLOD=2.9811;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,22:27:59.42:715,59,0	1/1:0,5:5:15.04:169,15,0	0/0:10,0:9:26.99:0,27,299	0/0:6,0:5:4.73:0,5,104	1/1:0,13:13:39.11:440,39,0	0/0:4,0:4:9.66:0,10,53	0/0:8,0:8:21.17:0,21,124	0/0:20,0:20:10.73:0,11,180	1/1:1,7:8:17.99:197,18,0	0/0:11,0:11:25.88:0,26,138	0/0:21,0:21:56.06:0,56,361	0/0:7,0:7:19.56:0,20,107	0/0:17,0:17:22.37:0,22,246	0/0:8,0:8:23.50:0,23,143	0/0:13,0:13:18.40:0,18,107	0/0:15,0:15:38.54:0,39,224	1/1:2,16:18:28.83:517,29,0	0/0:13,0:13:29.28:0,29,171	0/0:9,0:9:23.88:0,24,123	0/0:13,0:13:29.46:0,29,186	0/0:3,0:3:3.86:0,4,23	0/0:4,0:4:5.42:0,5,26	0/0:12,0:12:5.13:0,5,146	0/0:3,0:3:8.81:0,9,52	0/0:20,0:20:41.08:0,41,253	0/0:19,0:19:52.67:0,53,295	0/0:24,0:24:52.17:0,52,326	0/0:3,0:3:5.85:0,6,34
chr10	34925867	.	C	CTG	28951.87	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-13.923;DP=714;FS=0.803;HRun=0;HaplotypeScore=71.9730;InbreedingCoeff=0.9959;MQ=71.46;MQ0=7;MQRankSum=-4.763;QD=48.33;ReadPosRankSum=2.943;VQSLOD=6.2260;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,49:50:99:2424,126,0	1/1:0,12:12:30.10:580,30,0	0/0:18,0:17:36.16:0,36,673	0/0:23,0:23:56.87:0,57,801	1/1:0,24:27:66.23:1264,66,0	1/1:2,22:24:54.19:1043,54,0	1/1:3,28:31:69.71:1334,70,0	1/1:2,25:27:78.22:1407,78,0	1/1:0,27:26:69.24:1333,69,0	1/1:1,36:38:99:2024,111,0	1/1:1,11:12:27.09:522,27,0	0/0:24,0:24:72.23:0,72,1080	1/1:2,24:26:66.23:1272,66,0	1/1:1,27:31:75.26:1448,75,0	1/1:1,29:30:72.25:1391,72,0	1/1:0,23:22:48.16:927,48,0	1/1:0,43:42:99:2202,114,0	1/1:0,20:20:54.19:1043,54,0	1/1:3,16:19:51.17:957,51,0	1/1:2,16:18:39.13:753,39,0	1/1:4,50:52:99:2608,135,0	1/1:1,13:14:36.12:695,36,0	0/0:25,0:25:72.23:0,72,1079	0/0:25,0:25:72.24:0,72,1101	1/1:1,22:23:66.23:1275,66,0	1/1:0,24:25:75.22:1352,75,0	1/1:0,14:15:42.14:810,42,0	1/1:0,7:7:15.05:290,15,0
chr10	34925997	.	T	TG	18460.72	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-8.177;DP=625;FS=0.643;HRun=5;HaplotypeScore=58.9195;InbreedingCoeff=0.9993;MQ=74.96;MQ0=0;MQRankSum=-9.599;QD=31.72;ReadPosRankSum=6.254;VQSLOD=4.7476;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,21:22:54.18:710,54,0	1/1:0,12:12:36.12:474,36,0	0/0:24,0:24:64.14:0,64,643	0/0:19,0:18:45.06:0,45,467	1/1:1,22:23:63.20:828,63,0	1/1:0,16:16:42.14:553,42,0	1/1:0,19:19:47.89:631,48,0	1/1:3,31:34:90.19:1102,90,0	1/1:1,24:25:63.20:829,63,0	1/1:6,20:26:57.17:731,57,0	1/1:2,11:13:33.11:432,33,0	1/1:0,15:15:39.13:513,39,0	1/1:5,21:26:45.15:590,45,0	1/1:1,22:23:48.16:632,48,0	1/1:1,30:31:81.26:1066,81,0	1/1:4,12:16:36.12:474,36,0	1/1:1,19:20:57.19:750,57,0	1/1:2,16:18:45.15:589,45,0	1/1:3,17:20:48.12:600,48,0	1/1:1,29:30:81.26:1065,81,0	1/1:4,28:32:72.23:947,72,0	1/1:2,14:16:36.12:472,36,0	1/1:3,15:18:39.13:513,39,0	1/1:1,25:26:63.20:829,63,0	1/1:1,27:28:66.21:868,66,0	1/1:3,31:34:93.26:1179,93,0	1/1:2,20:22:53.98:689,54,0	1/1:5,12:17:29.72:394,30,0
chr10	34935315	.	GCACACA	G	91.58	PASS	AB=1.000;AC=6;AF=0.111;AN=54;BaseQRankSum=2.864;DP=698;FS=6.728;HRun=0;HaplotypeScore=219.8232;InbreedingCoeff=0.4239;MQ=58.99;MQ0=20;MQRankSum=-1.664;QD=1.55;ReadPosRankSum=0.224;VQSLOD=1.9718;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:13,0:26:18.93:19,0,238	0/0:8,0:8:11.99:0,12,200	0/0:44,0:26:5.38:0,5,69	0/0:58,0:30:19.74:0,20,248	0/0:30,0:29:42.01:0,42,832	0/0:24,0:23:13:0,13,201	0/0:18,0:17:27.52:0,28,619	0/0:29,0:27:42.03:0,42,808	0/0:34,0:34:43.35:0,43,960	0/0:30,0:28:53.96:0,54,1048	0/0:12,0:12:15.02:0,15,294	1/1:0,5:7:9.03:166,9,0	0/0:33,0:33:63.14:0,63,1474	0/0:32,0:32:45.15:0,45,1071	0/0:43,0:43:57.07:0,57,1342	0/0:30,0:29:37.62:0,38,1012	0/0:27,0:26:50.98:0,51,1050	0/1:15,0:14:8.21:8,0,553	0/0:16,0:16:15.01:0,15,327	0/0:32,0:32:31.21:0,31,1017	0/0:30,0:30:72.46:0,72,1294	0/0:24,0:24:27:0,27,510	./.	1/1:4,6:9:0.47:1,0,0	0/0:17,0:17:15.87:0,16,340	0/0:23,0:22:48.11:0,48,1048	0/0:29,0:29:44.97:0,45,871	0/0:10,0:10:27.02:0,27,628
chr10	34937363	.	CAA	C	16638.28	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=2.218;DP=712;FS=5.849;HRun=10;HaplotypeScore=100.0377;InbreedingCoeff=0.9983;MQ=72.33;MQ0=1;MQRankSum=-2.693;QD=27.73;ReadPosRankSum=1.468;VQSLOD=4.8929;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,40:42:99:1204,108,0	1/1:0,10:10:27.07:301,27,0	0/0:17,0:18:26.73:0,27,428	0/0:14,0:16:35.28:0,35,465	1/1:5,31:36:81.18:903,81,0	1/1:0,21:21:63.17:702,63,0	1/1:2,24:26:63.17:702,63,0	1/1:1,27:28:78.21:870,78,0	1/1:4,19:23:48.11:535,48,0	1/1:4,29:33:84.20:936,84,0	1/1:2,21:23:60.15:669,60,0	0/0:26,0:26:69.21:0,69,1053	1/1:1,21:22:60.15:669,60,0	1/1:2,29:30:80.95:881,81,0	1/1:4,26:30:66.17:736,66,0	1/1:3,24:27:69.17:769,69,0	1/1:2,26:28:69.17:769,69,0	1/1:0,11:11:27.07:301,27,0	1/1:5,19:24:57.13:635,57,0	1/1:2,23:25:21.56:686,22,0	1/1:5,23:28:63.16:702,63,0	1/1:3,13:16:39.10:435,39,0	0/0:24,0:24:63.21:0,63,986	0/0:28,0:28:81.28:0,81,1282	1/1:2,26:28:69.18:769,69,0	1/1:2,32:34:96.22:1058,96,0	1/1:2,36:38:90.22:1003,90,0	1/1:0,16:16:36.10:401,36,0
chr10	34937818	.	AT	A	2709.60	PASS	AB=0.962;AC=44;AF=0.786;AN=56;BaseQRankSum=15.619;DP=691;FS=0.737;HRun=2;HaplotypeScore=190.0001;InbreedingCoeff=0.8070;MQ=76.26;MQ0=0;MQRankSum=-6.410;QD=4.69;ReadPosRankSum=5.095;VQSLOD=0.5712;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:44,0:44:17.15:147,17,0	1/1:13,0:13:19.70:68,20,0	0/0:28,0:28:81.18:0,81,1109	0/0:16,0:16:34.48:0,34,500	1/1:33,0:33:51.21:212,51,0	1/1:36,0:36:69.23:245,69,0	1/1:21,0:21:33.88:116,34,0	0/1:27,1:28:0.20:109,0,0	1/1:25,0:25:24.33:93,24,0	1/1:40,0:40:36.99:156,37,0	1/1:19,0:19:28.23:106,28,0	0/0:23,0:23:69.23:0,69,1016	1/1:27,0:27:44.06:147,44,0	1/1:21,0:21:34.60:100,35,0	1/1:33,0:33:59.96:213,60,0	1/1:16,0:16:31.51:100,32,0	1/1:29,0:29:49.40:192,49,0	1/1:15,0:15:26.01:74,26,0	0/1:22,1:23:33.44:64,0,33	1/1:19,1:20:33.40:117,33,0	1/1:31,0:31:38.49:142,38,0	1/1:20,0:20:30.74:122,31,0	0/0:26,0:26:75.23:0,75,1100	0/0:20,0:20:60.16:0,60,866	1/1:21,0:21:31.87:110,32,0	1/1:33,1:34:50.18:165,50,0	1/1:24,0:24:13.19:75,13,0	1/1:5,0:5:5.85:17,6,0
chr10	34937823	.	AC	A	4155.23	PASS	AB=0.960;AC=45;AF=0.804;AN=56;BaseQRankSum=15.561;DP=680;FS=3.232;HRun=1;HaplotypeScore=183.7894;InbreedingCoeff=0.8307;MQ=72.80;MQ0=0;MQRankSum=-6.319;QD=7.28;ReadPosRankSum=4.623;VQSLOD=1.1358;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:44,0:44:59.83:286,60,0	1/1:15,0:15:30.01:119,30,0	0/0:24,0:24:51.38:0,51,947	0/0:15,0:15:32.83:0,33,529	1/1:28,0:28:55.63:207,56,0	1/1:33,0:33:75.72:265,76,0	1/1:21,0:21:38.93:138,39,0	1/1:27,1:28:2.94:177,3,0	1/1:24,0:24:31.37:167,31,0	1/1:39,0:39:61.63:259,62,0	1/1:19,0:19:39.84:166,40,0	0/0:23,0:23:69.21:0,69,1032	1/1:26,1:27:54.37:212,54,0	1/1:23,0:23:43.73:154,44,0	1/1:30,0:30:66.75:241,67,0	1/1:17,0:17:39.26:148,39,0	1/1:29,0:29:50.38:172,50,0	1/1:16,0:16:33.90:133,34,0	0/1:23,1:24:26.69:125,0,27	1/1:20,1:21:49.15:213,49,0	1/1:31,0:31:53.93:199,54,0	1/1:19,0:19:35.97:137,36,0	0/0:26,0:26:78.24:0,78,1165	0/0:21,0:21:63.20:0,63,935	1/1:20,0:20:42.09:155,42,0	1/1:34,1:35:75.45:316,75,0	1/1:23,0:23:12.01:138,12,0	1/1:5,0:5:7.34:26,7,0
chr10	34937824	.	CAA	C	22299.52	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=13.469;DP=676;FS=2.284;HRun=3;HaplotypeScore=131.9453;InbreedingCoeff=0.9864;MQ=72.87;MQ0=0;MQRankSum=-7.306;QD=39.33;ReadPosRankSum=2.358;VQSLOD=4.4139;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,43:43:99:1676,111,0	1/1:0,15:15:39.13:566,39,0	0/0:24,0:24:66.05:0,66,1144	0/0:15,0:15:29.79:0,30,682	1/1:1,27:28:75.17:1095,75,0	1/1:0,33:33:93.32:1420,93,0	1/1:0,21:21:48.16:732,48,0	1/1:3,25:28:78.18:1080,78,0	1/1:0,23:23:63.21:951,63,0	1/1:1,37:38:99:1641,111,0	1/1:2,17:19:48.16:701,48,0	0/0:23,0:23:69.24:0,69,1299	1/1:1,26:27:69.23:1046,69,0	1/1:0,23:23:54.18:826,54,0	1/1:0,30:30:81.28:1238,81,0	1/1:0,17:17:51.04:749,51,0	1/1:0,29:29:66.22:1000,66,0	1/1:0,16:16:42.14:642,42,0	1/1:4,20:24:60.13:860,60,0	1/1:1,20:21:63.12:902,63,0	1/1:1,30:31:72.43:1054,72,0	1/1:0,19:19:50.98:710,51,0	0/0:27,0:27:81.27:0,81,1517	0/0:20,0:20:60.18:0,60,1117	1/1:0,19:19:54.18:807,54,0	1/1:1,34:35:99:1561,105,0	1/1:3,20:23:60.20:907,60,0	1/1:0,5:5:9.03:138,9,0
chr10	34938652	.	ATGTG	A	5822.36	PASS	AB=0.733;AC=31;AF=0.574;AN=54;BaseQRankSum=8.558;DP=538;FS=3.301;HRun=0;HaplotypeScore=198.3699;InbreedingCoeff=-0.4782;MQ=47.67;MQ0=12;MQRankSum=-4.548;QD=12.88;ReadPosRankSum=11.588;VQSLOD=2.9516;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:18,6:24:15.88:142,16,0	0/1:4,2:6:16.54:88,0,17	0/0:26,0:12:30.10:0,30,657	0/0:42,0:32:70.14:0,70,1738	0/1:17,8:26:99:155,0,145	0/1:10,9:19:16.55:252,0,17	0/1:12,4:16:51.78:110,0,52	0/1:16,0:14:44.39:44,0,104	0/1:14,8:22:19.34:337,0,19	0/1:14,10:23:0.45:574,0,0	1/1:15,7:22:6.40:315,6,0	0/1:8,13:21:46.89:276,0,47	0/1:10,7:17:21.88:193,0,22	1/1:8,12:20:22.33:365,22,0	1/1:7,8:15:2.70:125,3,0	1/1:10,7:16:6.28:294,6,0	0/1:10,6:16:86.78:122,0,87	0/1:12,6:18:76.57:307,0,77	0/1:17,4:21:40.94:367,0,41	1/1:11,10:21:0.46:412,0,0	./.	0/1:6,5:11:22.66:55,0,23	0/1:8,16:24:62.12:171,0,62	0/1:13,4:16:17.83:18,0,18	0/1:10,6:16:99:265,0,100	0/1:11,9:20:67.68:360,0,68	0/1:6,11:17:24.44:371,0,24	0/1:4,2:6:25.80:105,0,26
chr10	34938660	.	ATGTG	A	5424.62	PASS	AB=0.721;AC=29;AF=0.518;AN=56;BaseQRankSum=10.549;DP=528;FS=0.429;HRun=0;HaplotypeScore=198.8950;InbreedingCoeff=-0.5155;MQ=48.20;MQ0=12;MQRankSum=-4.596;QD=12.47;ReadPosRankSum=9.348;VQSLOD=3.0466;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:18,6:24:6.61:100,0,7	0/1:5,1:6:16.61:83,0,17	0/0:33,0:15:39:0,39,716	0/0:41,0:30:68.37:0,68,1392	0/1:16,8:24:99:176,0,141	0/1:9,9:18:40.33:229,0,40	0/1:12,4:16:79.71:87,0,80	0/0:19,0:17:10.54:0,11,184	0/1:10,8:18:22.34:316,0,22	0/1:10,10:20:19.84:494,0,20	1/1:14,7:21:6.44:318,6,0	0/1:7,13:20:47.59:259,0,48	0/1:9,7:16:31.15:151,0,31	1/1:6,12:18:19.35:342,19,0	0/1:3,8:11:0.75:101,0,1	1/1:7,7:13:3.30:270,3,0	0/1:11,6:17:97.29:97,0,130	0/1:13,6:19:71.33:326,0,71	0/1:14,4:18:53.26:332,0,53	0/1:14,10:24:16.71:432,0,17	1/1:14,3:15:2.99:24,3,0	0/1:7,5:12:20.28:77,0,20	0/1:18,8:26:83.30:169,0,83	0/1:12,4:16:15.64:16,0,38	0/1:11,6:17:99:262,0,120	0/1:11,9:20:99:330,0,110	0/1:6,11:17:30:332,0,30	0/1:3,2:5:25.37:100,0,25
chr10	34938788	.	G	GGA	1022.70	PASS	AB=0.889;AC=30;AF=0.625;AN=48;BaseQRankSum=-1.171;DP=366;FS=3.929;HRun=0;HaplotypeScore=65.3147;InbreedingCoeff=0.0979;MQ=58.34;MQ0=22;MQRankSum=3.009;QD=3.82;ReadPosRankSum=-1.817;VQSLOD=1.2180;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:22:5.76:106,6,0	0/0:4,0:3:0:0,0,0	./.	./.	1/1:19,0:19:8.74:73,9,0	0/0:8,0:9:5.82:0,6,35	0/1:6,8:15:51.40:120,0,51	0/1:11,0:10:10.38:10,0,27	1/1:17,0:16:2.84:22,3,0	1/1:16,0:15:0.94:2,1,0	0/1:14,2:16:39.19:120,0,39	0/1:16,0:16:37.61:46,0,38	1/1:16,0:15:8.99:91,9,0	0/0:7,0:7:3.01:0,3,33	0/1:5,1:6:18.25:39,0,18	0/0:7,0:7:3.01:0,3,33	1/1:9,0:8:5.97:44,6,0	1/1:3,4:7:3.01:45,3,0	./.	1/1:12,2:14:12:135,12,0	1/1:17,1:13:3.01:42,3,0	./.	0/0:15,0:15:3.01:0,3,33	0/1:29,0:29:31.97:32,0,74	1/1:9,3:11:4.26:48,4,0	1/1:11,0:10:10.26:98,10,0	1/1:8,3:11:6.02:90,6,0	0/0:7,0:6:4.75:0,5,32
chr10	34940029	.	T	TGTGCTTAGACATTCATTTCAACGAGATCCTTTG	201745.87	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=1.055;DP=814;FS=5.268;HRun=0;HaplotypeScore=676.2316;InbreedingCoeff=0.9924;MQ=62.89;MQ0=0;MQRankSum=-9.655;QD=263.03;ReadPosRankSum=5.424;VQSLOD=2.5378;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:31:87.29:8169,87,0	0/0:8,0:8:21.07:0,21,1447	0/0:21,0:21:53.38:0,53,1787	0/0:18,0:18:32.22:0,32,1406	1/1:36,0:39:99:9407,108,0	1/1:26,0:31:81.28:9221,81,0	1/1:28,0:28:75.26:6522,75,0	1/1:37,0:37:99:5991,102,0	1/1:43,0:49:99:12011,132,0	1/1:38,0:39:99:9619,114,0	1/1:29,1:31:87.30:8738,87,0	1/1:35,0:36:99:11653,108,0	1/1:44,0:44:99:11496,123,0	1/1:35,0:37:99:10517,99,0	1/1:37,0:37:99:10281,105,0	1/1:36,0:40:99:11394,105,0	1/1:13,0:13:30.10:2567,30,0	1/1:7,0:7:21.07:1572,21,0	1/1:13,0:13:33.11:2201,33,0	1/1:23,0:23:66.18:7146,66,0	1/1:12,0:12:21.07:1372,21,0	1/1:38,0:38:99:9321,111,0	1/1:25,0:25:72.25:6254,72,0	1/1:15,0:19:48.16:4019,48,0	1/1:32,0:36:96.33:11140,96,0	1/1:41,0:43:99:13191,123,0	1/1:51,0:51:99:15949,148,0	1/1:5,0:7:18.06:1995,18,0
chr10	34942352	.	CAA	C	2156.77	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=3.786;DP=523;FS=7.849;HRun=13;HaplotypeScore=67.4359;InbreedingCoeff=0.8972;MQ=51.22;MQ0=29;MQRankSum=4.974;QD=13.65;ReadPosRankSum=4.987;VQSLOD=2.1090;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,28:32:59.81:565,60,0	0/0:1,0:2:3:0,3,29	0/0:30,0:7:11.01:0,11,118	0/0:31,0:12:2.85:0,3,155	1/1:7,11:17:23.70:232,24,0	0/0:12,0:12:29.90:0,30,319	0/0:18,0:17:41.32:0,41,450	0/0:25,0:24:29.78:0,30,615	1/1:5,11:16:23.98:233,24,0	0/0:20,0:20:38.51:0,39,433	0/0:18,0:19:47.13:0,47,623	1/1:5,9:13:11.97:116,12,0	0/0:15,0:16:35.49:0,35,418	0/0:22,0:22:50.82:0,51,531	0/0:15,0:16:19.88:0,20,355	0/0:9,0:11:29.41:0,29,277	1/1:8,26:32:62.83:594,63,0	0/0:17,1:18:7:0,7,428	0/0:20,0:20:44.79:0,45,499	0/0:17,0:17:44.62:0,45,583	0/0:16,0:13:29.54:0,30,374	0/0:11,0:13:38.02:0,38,447	1/1:2,11:12:30.05:291,30,0	1/1:9,18:24:33.01:320,33,0	0/0:4,0:4:9.01:0,9,97	0/0:12,0:12:27.05:0,27,352	0/0:19,0:17:36.08:0,36,491	0/0:8,0:8:18.04:0,18,227
chr10	34944004	.	T	TC	561.09	PASS	AC=18;AF=0.818;AN=22;BaseQRankSum=-2.216;DP=38;FS=0.000;HRun=3;HaplotypeScore=9.4156;InbreedingCoeff=0.2970;MQ=32.89;MQ0=2;MQRankSum=0.180;QD=24.40;ReadPosRankSum=-0.180;VQSLOD=2.4950;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,1:1:2.92:17,3,0	./.	./.	./.	./.	./.	1/1:1,4:4:5.97:61,6,0	1/1:1,3:4:10.85:130,11,0	0/0:1,0:1:0.89:0,1,2	./.	./.	./.	1/1:0,3:2:5.93:59,6,0	1/1:1,0:1:2.94:18,3,0	./.	./.	0/0:1,0:1:2.97:0,3,20	1/1:1,0:1:2.99:24,3,0	1/1:0,4:4:12.04:168,12,0	./.	./.	./.	./.	./.	./.	1/1:0,3:3:9.03:126,9,0	./.	1/1:0,1:1:3.01:42,3,0
chr10	34945213	.	TAA	T	2823.30	PASS	AB=0.615;AC=31;AF=0.674;AN=46;BaseQRankSum=4.988;DP=283;FS=23.031;HRun=2;HaplotypeScore=29.4450;InbreedingCoeff=0.5703;MQ=21.82;MQ0=69;MQRankSum=-1.573;QD=20.17;ReadPosRankSum=-0.533;VQSLOD=-0.4349;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:5:2.16:0,2,57	0/0:3,0:1:3.01:0,3,59	./.	./.	0/0:28,0:17:12.04:0,12,235	1/1:1,4:3:9.03:142,9,0	1/1:4,2:2:6.02:94,6,0	1/1:10,6:4:12.04:190,12,0	0/0:24,0:9:9.03:0,9,176	1/1:3,7:4:12.04:187,12,0	./.	0/0:8,0:3:3.01:0,3,59	1/1:3,8:6:15.05:236,15,0	1/1:3,8:6:18.06:283,18,0	1/1:1,10:9:21.07:333,21,0	1/1:6,5:5:15.05:234,15,0	0/0:24,0:7:3.01:0,3,59	1/1:4,3:3:9.03:143,9,0	./.	1/1:1,1:1:3.01:47,3,0	1/1:4,4:2:3.01:47,3,0	1/1:2,6:6:18.06:280,18,0	0/0:14,0:7:5.99:0,6,80	./.	1/1:2,2:2:6.02:94,6,0	1/1:3,4:5:15.02:209,15,0	1/1:6,9:6:15.05:239,15,0	0/1:3,5:6:40.71:219,0,41
chr10	34945220	.	GT	G	1803.82	PASS	AB=0.615;AC=31;AF=0.674;AN=46;BaseQRankSum=4.398;DP=289;FS=21.889;HRun=2;HaplotypeScore=30.4297;InbreedingCoeff=0.5407;MQ=21.21;MQ0=80;MQRankSum=-1.331;QD=12.53;ReadPosRankSum=-0.679;VQSLOD=0.4043;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:5:3:0,3,45	0/0:1,0:1:3.01:0,3,45	./.	./.	0/0:26,0:17:12.04:0,12,168	1/1:3,4:3:9.02:96,9,0	1/1:5,2:2:6.02:67,6,0	1/1:13,4:4:12.03:137,12,0	0/0:24,0:9:9.03:0,9,125	1/1:4,7:4:12.03:134,12,0	./.	0/0:9,0:3:3.01:0,3,45	1/1:6,5:5:6.81:126,7,0	1/1:3,8:6:17.99:171,18,0	1/1:2,7:7:11.15:182,11,0	1/1:6,5:5:15.04:165,15,0	0/0:25,0:7:3.01:0,3,45	1/1:6,3:3:9.03:107,9,0	./.	1/1:1,1:1:3.01:33,3,0	1/1:4,4:2:3.01:32,3,0	1/1:2,6:6:18.05:194,18,0	0/0:12,0:7:3.01:0,3,45	./.	1/1:2,2:2:6.02:66,6,0	1/1:2,4:4:12.03:133,12,0	1/1:6,9:6:15.03:158,15,0	0/1:3,5:6:26.71:153,0,27
chr10	34945556	.	TC	T	228.91	PASS	AC=2;AF=0.038;AN=52;BaseQRankSum=2.983;DP=290;FS=0.000;HRun=6;HaplotypeScore=32.5822;InbreedingCoeff=0.4739;MQ=38.87;MQ0=40;MQRankSum=-2.528;QD=11.45;ReadPosRankSum=0.501;VQSLOD=0.3429;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,15:14:30.08:322,30,0	0/0:3,0:3:9.03:0,9,118	./.	./.	0/0:13,0:12:18.06:0,18,237	0/0:5,0:5:3.01:0,3,39	0/0:13,0:9:14.98:0,15,167	0/0:10,0:7:12.04:0,12,151	0/0:12,0:12:21.07:0,21,276	0/0:9,0:9:24.08:0,24,311	0/0:10,0:9:9.03:0,9,118	0/0:13,0:12:20.79:0,21,252	0/0:11,0:11:20.90:0,21,271	0/0:17,0:14:27.07:0,27,328	0/0:9,0:9:15.05:0,15,197	0/0:13,0:12:30.05:0,30,370	0/0:18,0:10:9.03:0,9,118	0/0:10,0:4:6.02:0,6,79	0/0:5,0:4:12.04:0,12,158	0/0:10,0:10:21.07:0,21,271	0/0:28,0:15:18.06:0,18,237	0/0:12,0:12:18.06:0,18,237	0/0:7,0:6:12.04:0,12,158	0/0:14,0:9:12.04:0,12,158	0/0:6,0:5:9.03:0,9,118	0/0:4,0:3:3.01:0,3,39	0/0:12,0:11:30.10:0,30,394	0/0:2,0:2:6.02:0,6,79
chr10	34945989	.	A	ATT	2398.70	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=4.198;DP=549;FS=3.461;HRun=9;HaplotypeScore=71.2746;InbreedingCoeff=0.9526;MQ=75.33;MQ0=0;MQRankSum=-0.258;QD=16.66;ReadPosRankSum=0.579;VQSLOD=1.9299;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,0:19:44.92:154,45,0	0/0:10,0:10:21.05:0,21,223	0/0:13,0:13:17.79:0,18,244	0/0:11,0:11:0.43:0,0,127	1/1:3,25:32:72.92:1005,73,0	0/0:22,0:22:60.14:0,60,639	0/0:17,0:17:45.08:0,45,469	0/0:25,0:26:59.84:0,60,611	1/1:5,13:20:33.06:464,33,0	0/0:17,0:17:39.07:0,39,415	0/0:12,0:13:29.77:0,30,283	1/1:6,0:21:39.76:170,40,0	0/0:28,0:28:81.12:0,81,833	0/0:29,0:30:66.11:0,66,758	0/0:22,0:22:66.13:0,66,692	0/0:11,0:12:35.83:0,36,363	1/1:1,16:18:38.62:563,39,0	0/0:12,0:12:29.99:0,30,307	0/0:21,0:21:54.09:0,54,558	0/0:16,0:16:42.10:0,42,447	0/0:16,0:16:39.05:0,39,404	0/0:23,0:24:51.05:0,51,598	1/1:1,0:11:24.95:86,25,0	1/1:2,0:23:44.92:154,45,0	0/0:12,0:14:26.75:0,27,323	0/0:31,0:32:81.12:0,81,903	0/0:34,0:35:98.96:0,99,1025	0/0:14,0:14:30.05:0,30,319
chr10	34947701	.	G	GA	23508.20	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=2.341;DP=589;FS=9.865;HRun=0;HaplotypeScore=88.7712;InbreedingCoeff=0.9805;MQ=92.91;MQ0=0;MQRankSum=-11.869;QD=43.94;ReadPosRankSum=6.804;VQSLOD=3.8244;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,24:24:69.24:1102,69,0	1/1:0,8:8:15.03:240,15,0	0/0:27,0:27:78.24:0,78,1062	0/0:27,0:27:78.24:0,78,1032	1/1:0,27:27:78.27:1247,78,0	1/1:1,37:38:93.32:1486,93,0	1/1:0,9:9:24.08:384,24,0	1/1:0,17:17:51.17:806,51,0	1/1:1,19:20:54.18:863,54,0	1/1:1,23:24:72.24:1139,72,0	1/1:0,19:19:57.19:911,57,0	1/1:2,25:27:66.22:1055,66,0	1/1:0,19:19:54.18:863,54,0	1/1:2,17:19:54.14:835,54,0	1/1:1,18:19:48.16:767,48,0	1/1:0,24:24:69.24:1103,69,0	1/1:1,34:35:96.33:1535,96,0	1/1:0,5:5:15.05:240,15,0	1/1:0,24:24:69.24:1101,69,0	1/1:0,38:38:99:1631,102,0	1/1:0,15:15:39.13:624,39,0	1/1:1,18:19:51.17:815,51,0	1/1:0,15:15:41.72:671,42,0	1/1:0,16:16:45.15:720,45,0	1/1:0,12:12:30.10:480,30,0	1/1:0,31:31:93.24:1405,93,0	1/1:0,24:24:72.25:1151,72,0	1/1:0,7:7:21.07:336,21,0
chr10	34948686	.	T	TTAA	661.30	PASS	AB=1.000;AC=15;AF=0.375;AN=40;BaseQRankSum=-4.019;DP=206;FS=2.147;HRun=0;HaplotypeScore=56.0395;InbreedingCoeff=0.3733;MQ=61.22;MQ0=0;MQRankSum=-1.231;QD=6.96;ReadPosRankSum=-1.243;VQSLOD=1.5839;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,0:7:3.01:35,3,0	./.	./.	0/0:3,0:3:3.01:0,3,34	1/1:7,1:8:9.01:135,9,0	0/0:6,0:6:14.99:0,15,132	0/0:5,0:5:5.92:0,6,43	0/1:27,0:26:10.06:10,0,73	1/1:2,2:4:6.02:116,6,0	0/0:14,0:14:20.91:0,21,159	0/0:6,0:6:5.80:0,6,47	./.	0/0:8,0:8:18.02:0,18,172	1/1:0,4:4:6.02:116,6,0	./.	./.	1/1:3,8:11:18.06:348,18,0	0/0:11,0:11:0.81:0,1,156	0/1:16,0:16:14.12:14,0,61	./.	0/0:7,0:7:8.94:0,9,70	./.	1/1:3,0:3:2.92:17,3,0	./.	0/0:6,0:6:9:0,9,79	0/0:10,0:10:2.03:0,2,62	0/0:10,0:10:8.75:0,9,55	0/1:15,0:15:9.98:10,0,69
chr10	34948720	.	TAAC	T	1565.57	PASS	AB=1.000;AC=28;AF=0.538;AN=52;BaseQRankSum=-9.937;DP=212;FS=6.766;HRun=0;HaplotypeScore=46.5767;InbreedingCoeff=-0.3287;MQ=72.51;MQ0=0;MQRankSum=-0.881;QD=8.70;ReadPosRankSum=-5.480;VQSLOD=-0.2350;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:8,0:8:24.59:25,0,28	1/1:2,0:2:5.99:50,6,0	0/0:9,0:9:27.02:0,27,262	0/0:4,0:3:8.87:0,9,105	0/1:8,0:8:12.10:77,0,12	0/1:9,0:9:26.47:26,0,168	0/1:6,0:6:39.73:75,0,40	0/1:24,0:23:99:210,0,175	0/1:3,0:3:16.30:16,0,20	0/1:16,0:16:99:191,0,165	0/1:6,0:6:55.92:56,0,75	./.	0/0:6,0:6:18.05:0,18,217	0/1:5,0:5:16.16:16,0,28	1/1:3,0:3:8.92:67,9,0	1/1:3,0:3:8.99:75,9,0	0/1:12,0:12:62.64:63,0,67	0/1:16,0:16:46.06:46,0,247	0/1:12,0:12:99:124,0,109	1/1:2,0:2:5.99:50,6,0	0/1:5,0:5:12.95:13,0,89	1/1:1,0:1:3:25,3,0	0/0:8,0:8:5.97:0,6,63	./.	0/1:5,0:5:34.93:35,0,86	0/1:11,0:11:86.75:108,0,87	1/1:1,6:7:9.03:151,9,0	0/1:16,0:16:75.18:228,0,75
chr10	34948859	.	C	CTAGTACAAAA	27959.96	PASS	AB=0.812;AC=45;AF=0.804;AN=56;BaseQRankSum=-3.394;DP=418;FS=5.507;HRun=0;HaplotypeScore=147.5271;InbreedingCoeff=0.4474;MQ=70.96;MQ0=0;MQRankSum=-6.336;QD=71.51;ReadPosRankSum=4.901;VQSLOD=4.3640;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,8:22:50.20:1455,50,0	0/0:3,0:3:9.03:0,9,201	0/0:11,0:11:26.64:0,27,387	0/0:13,0:13:29.19:0,29,479	1/1:13,3:16:32.80:1020,33,0	0/1:13,6:19:1.04:1240,0,1	0/1:7,4:11:4.92:954,0,5	0/1:42,0:41:99:2344,0,151	0/1:11,6:17:26.75:1035,0,27	1/1:10,3:13:15.86:1032,16,0	1/1:3,12:15:15.78:1664,16,0	1/1:8,3:11:15.84:707,16,0	1/1:7,6:13:38.40:1209,38,0	1/1:6,5:11:10.85:831,11,0	1/1:9,4:13:27.17:854,27,0	1/1:9,3:12:15.17:623,15,0	1/1:9,2:11:25.59:804,26,0	1/1:7,2:9:17.97:549,18,0	0/1:15,3:19:53.17:853,0,53	1/1:12,4:16:18.68:1062,19,0	1/1:6,1:7:17.92:293,18,0	1/1:12,7:19:21.08:1363,21,0	1/1:3,7:10:29.68:1152,30,0	1/1:9,2:11:30.32:658,30,0	1/1:8,9:17:46.85:1536,47,0	1/1:10,6:17:14.15:1103,14,0	1/1:13,6:19:35.67:1427,36,0	1/1:9,11:20:60.10:2195,60,0
chr10	34949858	.	TG	T	16489.57	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=3.135;DP=604;FS=7.029;HRun=5;HaplotypeScore=168.8178;InbreedingCoeff=0.9994;MQ=81.26;MQ0=0;MQRankSum=-10.615;QD=29.60;ReadPosRankSum=7.027;VQSLOD=2.4578;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:3,14:17:45.12:502,45,0	1/1:0,15:15:45.13:509,45,0	0/0:24,0:24:65.90:0,66,772	0/0:23,0:23:60.13:0,60,768	1/1:3,20:23:45.11:496,45,0	1/1:7,23:30:81.13:873,81,0	1/1:1,17:18:36.10:407,36,0	1/1:2,30:32:87.21:959,87,0	1/1:3,14:17:42.12:475,42,0	1/1:5,30:35:99:1123,102,0	1/1:3,25:28:66.17:731,66,0	1/1:0,19:19:57.16:644,57,0	1/1:3,17:20:60.14:658,60,0	1/1:2,18:20:54.14:602,54,0	1/1:3,19:22:60.16:672,60,0	1/1:0,12:12:33.09:373,33,0	1/1:1,17:18:42.12:475,42,0	1/1:2,10:12:33.08:362,33,0	1/1:1,24:25:72.18:798,72,0	1/1:2,27:29:75.20:838,75,0	1/1:1,15:16:33.03:357,33,0	1/1:0,15:15:42.12:475,42,0	1/1:1,16:17:45.13:509,45,0	1/1:2,16:18:41.60:461,42,0	1/1:3,24:27:75.14:832,75,0	1/1:1,30:31:90.24:1011,90,0	1/1:1,27:28:81.22:907,81,0	1/1:0,13:13:39.11:442,39,0
chr10	34949887	.	A	AATGGAACT	42910.26	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=4.390;DP=657;FS=0.000;HRun=0;HaplotypeScore=203.2757;InbreedingCoeff=0.9779;MQ=72.74;MQ0=0;MQRankSum=-9.112;QD=69.89;ReadPosRankSum=4.763;VQSLOD=4.3286;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,8:21:30.10:1206,30,0	1/1:8,8:16:27.08:1053,27,0	0/0:22,0:22:36.11:0,36,789	0/0:21,0:21:54.16:0,54,1288	1/1:8,16:29:45.07:1734,45,0	1/1:8,16:31:60.16:2304,60,0	1/1:11,8:19:42.01:1539,42,0	1/1:21,5:26:39.11:1195,39,0	1/1:11,8:19:39.12:1428,39,0	1/1:14,19:38:69.21:2727,69,0	1/1:11,19:33:51.17:2085,51,0	1/1:13,13:26:57.18:2274,57,0	1/1:5,12:23:39.13:1615,39,0	1/1:9,17:28:48.16:2055,48,0	1/1:7,14:26:42.14:1799,42,0	1/1:9,5:14:24.03:835,24,0	1/1:6,7:13:30.09:1109,30,0	1/1:4,3:8:12.04:515,12,0	1/1:16,4:20:36.10:1227,36,0	1/1:9,17:29:45.15:1927,45,0	1/1:12,4:15:30.02:1017,30,0	1/1:7,17:28:57.20:2360,57,0	1/1:8,13:29:36.10:1435,36,0	1/1:14,2:16:21.53:795,22,0	1/1:7,23:34:72.25:3004,72,0	1/1:15,17:32:84.24:3086,84,0	1/1:12,12:29:48.15:1870,48,0	1/1:7,4:11:21.07:716,21,0
chr10	34951311	.	C	CTTG	25181.68	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=1.377;DP=588;FS=14.443;HRun=0;HaplotypeScore=100.2864;InbreedingCoeff=0.9879;MQ=78.76;MQ0=0;MQRankSum=-8.725;QD=46.12;ReadPosRankSum=6.246;VQSLOD=5.4489;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,25:28:54.18:1143,54,0	1/1:2,6:8:18.06:367,18,0	0/0:26,0:26:60.24:0,60,820	0/0:16,0:14:30.06:0,30,434	1/1:3,20:23:45.07:831,45,0	1/1:0,23:23:63.22:1376,63,0	1/1:0,13:13:24.08:530,24,0	1/1:3,21:27:72.19:1359,72,0	1/1:0,28:28:57.20:1254,57,0	1/1:1,24:26:66.01:1205,66,0	1/1:2,15:19:39.13:859,39,0	1/1:0,13:15:21.07:463,21,0	1/1:2,15:17:36.12:792,36,0	1/1:7,11:18:48.01:889,48,0	1/1:2,32:34:75.26:1654,75,0	1/1:1,12:13:27.09:594,27,0	1/1:2,12:14:30.10:661,30,0	1/1:0,11:11:21.07:463,21,0	1/1:4,16:23:57.14:1069,57,0	1/1:0,19:19:42.08:861,42,0	1/1:1,17:18:45.09:945,45,0	1/1:1,27:28:51.17:1044,51,0	1/1:2,18:20:38.94:859,39,0	1/1:2,12:15:24.08:529,24,0	1/1:0,18:18:39.13:861,39,0	1/1:3,35:39:99:1998,99,0	1/1:3,34:38:90.31:1979,90,0	1/1:0,10:10:27.09:596,27,0
chr10	34952175	.	TG	T	19784.61	PASS	AC=50;AF=0.926;AN=54;BaseQRankSum=10.210;DP=652;FS=5.253;HRun=3;HaplotypeScore=201.2794;InbreedingCoeff=0.9998;MQ=82.08;MQ0=0;MQRankSum=-11.593;QD=32.92;ReadPosRankSum=6.449;VQSLOD=3.2786;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,41:43:99:1339,108,0	./.	0/0:28,0:28:81.23:0,81,1130	0/0:23,0:23:66.22:0,66,946	1/1:2,27:29:78.25:967,78,0	1/1:1,22:23:57.18:707,57,0	1/1:2,21:23:60.19:744,60,0	1/1:3,27:30:81.24:992,81,0	1/1:1,25:26:63.20:781,63,0	1/1:1,38:39:99:1410,114,0	1/1:0,18:18:48.15:595,48,0	1/1:1,19:20:54.17:669,54,0	1/1:3,22:25:63.20:781,63,0	1/1:0,23:23:66.21:818,66,0	1/1:2,25:27:75.24:930,75,0	1/1:1,20:21:51.16:632,51,0	1/1:1,21:22:57.18:707,57,0	1/1:0,14:14:39.12:483,39,0	1/1:0,19:19:57.17:696,57,0	1/1:0,18:18:54.17:669,54,0	1/1:1,32:33:84.74:1042,85,0	1/1:0,21:21:54.17:669,54,0	1/1:1,23:24:57.65:707,58,0	1/1:1,16:17:39.12:483,39,0	1/1:1,22:23:60.19:744,60,0	1/1:0,25:25:75.23:918,75,0	1/1:2,25:27:72.23:892,72,0	1/1:0,11:11:33.10:409,33,0
chr10	34953418	.	GCCCCATAC	G	25062.42	PASS	AC=48;AF=0.923;AN=52;BaseQRankSum=7.344;DP=566;FS=3.397;HRun=0;HaplotypeScore=216.1666;InbreedingCoeff=0.9145;MQ=85.48;MQ0=0;MQRankSum=-11.749;QD=49.24;ReadPosRankSum=6.914;VQSLOD=4.3658;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,24:30:30.10:765,30,0	./.	0/0:31,0:31:87.30:0,87,3457	0/0:26,0:26:70.12:0,70,2334	1/1:2,22:25:30.10:712,30,0	1/1:1,19:20:42.14:1181,42,0	1/1:5,25:30:11.13:788,11,0	1/1:3,19:22:57.10:1348,57,0	1/1:3,26:30:48.03:1238,48,0	1/1:3,18:21:54.14:1451,54,0	1/1:3,15:18:29.76:535,30,0	1/1:0,14:14:39.13:1117,39,0	1/1:2,25:27:63.09:1659,63,0	1/1:1,16:17:36.12:982,36,0	1/1:0,14:14:30.10:859,30,0	1/1:1,19:20:54.19:1546,54,0	1/1:3,14:17:33.11:945,33,0	./.	1/1:5,11:16:32.63:740,33,0	1/1:0,25:25:54.12:1383,54,0	1/1:4,14:18:24.01:572,24,0	1/1:3,25:28:51.09:1391,51,0	1/1:0,23:23:48.08:1160,48,0	1/1:5,12:17:12.04:343,12,0	1/1:1,17:18:38.93:865,39,0	1/1:0,23:23:66.22:1802,66,0	1/1:5,29:33:54.18:1535,54,0	1/1:0,2:2:6.02:145,6,0
chr10	34954753	.	AT	A	4241.03	PASS	AC=48;AF=1.000;AN=48;DP=270;FS=0.000;HRun=2;HaplotypeScore=35.4489;InbreedingCoeff=-0.0478;MQ=28.32;MQ0=111;QD=18.77;VQSLOD=4.5873;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,13:12:27.09:350,27,0	1/1:1,5:5:15.05:192,15,0	./.	./.	1/1:1,15:12:12.04:156,12,0	1/1:0,13:10:24.08:311,24,0	1/1:1,4:3:6.02:78,6,0	1/1:2,11:9:24.04:292,24,0	1/1:0,5:5:12.04:156,12,0	1/1:3,9:2:6.02:78,6,0	1/1:1,9:4:9.03:117,9,0	1/1:1,4:5:9.03:117,9,0	1/1:1,3:2:6.02:78,6,0	1/1:0,4:2:6.02:78,6,0	1/1:0,5:5:15.05:194,15,0	1/1:0,2:2:3.01:39,3,0	1/1:2,12:9:15.05:194,15,0	1/1:0,6:4:9.03:117,9,0	1/1:2,8:4:12.01:139,12,0	1/1:6,11:10:27.09:350,27,0	1/1:0,13:11:24.08:311,24,0	1/1:1,5:1:3.01:39,3,0	./.	./.	1/1:5,7:6:15.05:194,15,0	1/1:0,11:7:18.06:233,18,0	1/1:0,13:8:21.07:272,21,0	1/1:1,6:4:12.04:156,12,0
chr10	34954950	.	C	CT	15080.68	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=7.939;DP=478;FS=6.930;HRun=0;HaplotypeScore=124.8293;InbreedingCoeff=0.8667;MQ=87.97;MQ0=0;MQRankSum=-10.474;QD=34.99;ReadPosRankSum=4.594;VQSLOD=3.9828;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,34:35:84.28:1261,84,0	1/1:0,2:2:6.02:93,6,0	0/0:20,0:20:51.13:0,51,654	0/0:27,0:27:67.79:0,68,984	1/1:2,27:24:63.13:914,63,0	1/1:1,24:25:57.19:847,57,0	1/1:1,11:12:27.02:378,27,0	1/1:2,28:27:65.96:970,66,0	1/1:0,26:26:66.09:919,66,0	1/1:4,14:16:48.12:701,48,0	1/1:2,11:7:21.07:311,21,0	1/1:0,15:15:30.10:437,30,0	1/1:0,9:9:24.08:362,24,0	1/1:2,18:19:51.05:704,51,0	1/1:0,18:18:48.09:686,48,0	1/1:1,12:13:30.10:452,30,0	1/1:0,10:10:24.08:359,24,0	1/1:0,10:10:27.09:396,27,0	1/1:4,10:14:39.05:504,39,0	1/1:0,16:16:45.15:683,45,0	1/1:0,20:20:45.15:674,45,0	1/1:0,9:9:27.09:410,27,0	1/1:3,10:13:36.11:521,36,0	1/1:0,17:17:39.13:588,39,0	1/1:1,18:18:36.12:541,36,0	1/1:3,13:11:33.06:453,33,0	1/1:0,21:21:60.13:872,60,0	1/1:0,1:1:3.01:46,3,0
chr10	34955133	.	C	CA	12015.08	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=7.885;DP=544;FS=6.831;HRun=7;HaplotypeScore=181.0809;InbreedingCoeff=0.8801;MQ=85.18;MQ0=0;MQRankSum=-10.481;QD=24.77;ReadPosRankSum=4.678;VQSLOD=2.8129;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,2:32:51.81:268,52,0	1/1:3,1:12:25.98:153,26,0	0/0:26,0:25:58.24:0,58,535	0/0:33,0:32:67.64:0,68,607	1/1:2,0:25:57.23:297,57,0	1/1:2,23:25:37.25:731,37,0	1/1:1,18:19:54.17:652,54,0	1/1:4,19:23:57.17:688,57,0	1/1:0,1:18:40.35:225,40,0	1/1:3,30:33:90.28:1087,90,0	1/1:1,15:16:45.10:527,45,0	1/1:1,0:7:17.25:88,17,0	1/1:2,15:17:39.12:471,39,0	1/1:3,12:15:36.07:418,36,0	1/1:3,25:28:66.20:796,66,0	1/1:0,19:19:51.16:616,51,0	1/1:1,0:7:8.59:44,9,0	1/1:2,8:10:15.05:181,15,0	1/1:7,14:21:39.12:471,39,0	1/1:5,17:22:51.16:616,51,0	1/1:2,21:23:54.08:619,54,0	1/1:2,21:23:63.15:744,63,0	1/1:0,1:10:28.85:167,29,0	1/1:1,1:10:8.63:44,9,0	1/1:2,16:18:48.11:563,48,0	1/1:2,20:22:51.16:616,51,0	1/1:5,23:28:72.22:861,72,0	1/1:0,2:2:6.02:72,6,0
chr10	34955624	.	TC	T	7932.58	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=9.831;DP=315;FS=0.000;HRun=1;HaplotypeScore=183.6710;InbreedingCoeff=0.8033;MQ=68.06;MQ0=0;MQRankSum=-9.299;QD=28.74;ReadPosRankSum=6.905;VQSLOD=4.1710;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,15:15:41.88:433,42,0	1/1:0,5:5:5.98:55,6,0	0/0:19,0:19:57.19:0,57,911	0/0:20,0:20:54.18:0,54,840	1/1:0,10:10:21.07:259,21,0	1/1:2,10:12:35.92:367,36,0	1/1:0,6:6:14.96:161,15,0	1/1:2,18:18:9.25:571,9,0	1/1:0,8:8:24.01:276,24,0	1/1:0,13:13:36.10:426,36,0	1/1:0,7:7:21:242,21,0	1/1:0,4:4:12.04:147,12,0	1/1:1,11:12:36.04:412,36,0	1/1:0,14:14:41.90:439,42,0	1/1:0,20:20:53.83:570,54,0	1/1:0,14:13:36.11:433,36,0	1/1:0,5:5:14.96:158,15,0	1/1:2,9:11:27.06:312,27,0	1/1:1,9:11:27.03:298,27,0	1/1:0,9:9:21.02:229,21,0	1/1:0,2:2:3.01:38,3,0	1/1:0,11:11:26.89:279,27,0	1/1:0,11:11:27.02:311,27,0	1/1:0,11:11:20.84:199,21,0	1/1:1,8:8:20.86:199,21,0	1/1:1,14:15:39.11:467,39,0	1/1:0,15:16:45.14:542,45,0	1/1:0,5:5:11.92:112,12,0
chr10	34955976	.	A	AT	3750.09	PASS	AB=1.000;AC=51;AF=0.911;AN=56;BaseQRankSum=-1.736;DP=347;FS=3.976;HRun=6;HaplotypeScore=195.0910;InbreedingCoeff=0.3742;MQ=46.46;MQ0=5;MQRankSum=1.292;QD=12.26;ReadPosRankSum=-2.015;VQSLOD=0.7923;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:11,2:12:1.52:47,2,0	1/1:7,0:7:12:131,12,0	0/0:24,0:9:15.02:0,15,147	0/0:17,0:6:12.02:0,12,121	1/1:16,2:18:20.57:263,21,0	1/1:9,1:8:4.85:125,5,0	1/1:11,0:11:8.42:129,8,0	1/1:8,5:12:32.85:345,33,0	0/1:8,0:8:1.08:93,0,1	1/1:10,4:12:4.35:169,4,0	1/1:15,0:15:0.14:144,0,0	1/1:8,0:8:11.62:109,12,0	1/1:6,2:7:3.22:65,3,0	1/1:6,1:7:18.47:173,18,0	1/1:17,0:15:21.06:240,21,0	1/1:10,0:10:15.04:176,15,0	1/1:9,0:8:6.02:73,6,0	1/1:5,0:4:6.02:71,6,0	1/1:10,4:14:23.80:260,24,0	1/1:10,1:10:13.25:120,13,0	1/1:10,0:10:3.01:34,3,0	1/1:9,0:9:6.01:64,6,0	1/1:19,0:19:24.53:262,25,0	1/1:10,0:10:4.26:40,4,0	1/1:11,0:11:12.03:126,12,0	1/1:18,0:18:23.79:253,24,0	1/1:20,0:17:6.48:192,6,0	1/1:10,0:10:6.91:46,7,0
chr10	34955978	.	T	TG	2292.89	PASS	AB=0.982;AC=48;AF=0.857;AN=56;BaseQRankSum=0.957;DP=339;FS=1.434;HRun=0;HaplotypeScore=194.6959;InbreedingCoeff=0.2193;MQ=46.96;MQ0=4;MQRankSum=-3.876;QD=7.72;ReadPosRankSum=3.490;VQSLOD=3.7367;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:12,1:12:1.08:91,0,1	1/1:7,0:7:11.54:65,12,0	0/0:24,0:10:20.70:0,21,224	0/0:18,0:7:20.97:0,21,236	1/1:21,0:21:4.64:129,5,0	1/1:10,0:8:9.76:80,10,0	0/1:11,0:11:3.09:74,0,3	0/1:14,0:13:14.44:91,0,14	1/1:8,0:8:4.03:60,4,0	1/1:14,0:12:5.95:88,6,0	1/1:15,0:16:4.73:99,5,0	1/1:7,0:7:11.24:55,11,0	0/1:7,0:6:10.98:36,0,11	1/1:7,0:7:10.41:49,10,0	1/1:14,0:13:3.90:109,4,0	1/1:9,0:9:23.12:126,23,0	1/1:9,0:8:14.62:85,15,0	1/1:4,0:3:5.69:30,6,0	1/1:13,0:14:6.15:138,6,0	1/1:11,0:10:21.87:107,22,0	1/1:9,0:9:2.49:99,2,0	1/1:8,0:8:0.27:73,0,0	1/1:10,6:17:21.57:109,22,0	1/1:9,0:9:4.20:21,4,0	1/1:10,0:10:25.39:133,25,0	1/1:18,0:18:38.64:234,39,0	1/1:19,1:17:0.92:163,1,0	1/1:10,0:10:15.63:84,16,0
chr10	34956390	.	G	GA	245.16	PASS	AC=18;AF=0.474;AN=38;BaseQRankSum=6.597;DP=206;FS=17.602;HRun=0;HaplotypeScore=55.0255;InbreedingCoeff=0.7551;MQ=130.76;MQ0=0;MQRankSum=-5.510;QD=16.34;ReadPosRankSum=1.634;VQSLOD=4.2053;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:21:63.19:0,63,860	0/0:7,0:7:21.07:0,21,293	0/0:34,0:34:92.30:0,92,1263	0/0:17,0:17:41.01:0,41,621	0/0:29,0:29:72.24:0,72,1002	1/1:0,1:1:3:25,3,0	1/1:0,2:2:6:51,6,0	1/1:0,2:2:6.01:60,6,0	0/0:16,0:15:42.14:0,42,587	1/1:0,1:1:3:29,3,0	1/1:0,3:3:8.98:72,9,0	0/0:12,0:9:27.07:0,27,354	./.	1/1:0,2:2:5.99:49,6,0	./.	./.	0/0:19,0:17:51.17:0,51,713	./.	./.	./.	./.	./.	0/0:19,0:19:54.18:0,54,751	0/0:16,0:16:45.15:0,45,627	1/1:0,1:1:3:26,3,0	1/1:0,1:1:3:29,3,0	1/1:0,2:1:6.01:55,6,0	./.
chr10	34956396	.	AAG	A	256.12	PASS	AC=18;AF=0.474;AN=38;BaseQRankSum=6.428;DP=210;FS=22.904;HRun=0;HaplotypeScore=60.0580;InbreedingCoeff=0.7545;MQ=135.11;MQ0=0;MQRankSum=-6.020;QD=17.07;ReadPosRankSum=2.690;VQSLOD=1.5246;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:19:57.19:0,57,1130	0/0:6,0:6:18.06:0,18,365	0/0:33,0:33:99:0,99,1828	0/0:21,0:21:60.68:0,61,1164	0/0:28,0:28:78.16:0,78,1427	1/1:0,1:1:3:26,3,0	1/1:0,2:2:6:53,6,0	1/1:0,2:2:6.01:63,6,0	0/0:17,0:16:45.15:0,45,873	1/1:0,1:1:3.01:30,3,0	1/1:0,3:3:8.99:76,9,0	0/0:14,0:11:33.11:0,33,646	./.	1/1:0,2:2:6:51,6,0	./.	./.	0/0:20,0:18:54.12:0,54,1031	./.	./.	./.	./.	./.	0/0:20,0:20:57.11:0,57,1052	0/0:15,0:15:42.14:0,42,853	1/1:0,1:1:3:27,3,0	1/1:0,1:1:3.01:30,3,0	1/1:1,1:1:5.99:51,6,0	./.
chr10	34956619	.	CA	C	1771.08	PASS	AC=8;AF=0.148;AN=54;BaseQRankSum=1.044;DP=412;FS=11.785;HRun=3;HaplotypeScore=137.4505;InbreedingCoeff=0.9085;MQ=61.61;MQ0=28;MQRankSum=-1.112;QD=21.87;ReadPosRankSum=2.753;VQSLOD=2.2749;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,21:16:42.13:517,42,0	0/0:4,0:4:9.03:0,9,129	0/0:22,0:11:30.05:0,30,384	0/0:22,0:17:39.04:0,39,500	1/1:1,34:32:69.22:854,69,0	0/0:14,0:13:33.07:0,33,451	0/0:16,0:14:30.10:0,30,428	0/0:22,0:16:48.16:0,48,688	1/1:2,14:15:27.08:334,27,0	0/0:16,0:14:42.09:0,42,560	0/0:12,0:12:18.06:0,18,259	0/0:17,0:15:27.09:0,27,388	0/0:7,0:7:15.05:0,15,216	0/0:14,0:12:33.07:0,33,451	0/0:9,0:8:21.04:0,21,280	0/0:5,0:5:9.03:0,9,129	1/1:0,8:7:18.06:223,18,0	0/0:8,0:8:12.04:0,12,172	0/0:12,0:6:18.06:0,18,259	0/0:35,0:35:81.27:0,81,1158	0/0:16,0:13:12.04:0,12,172	0/0:7,0:7:15.05:0,15,215	0/0:21,0:21:48.03:0,48,620	./.	0/0:16,0:16:36.10:0,36,497	0/0:14,0:12:33.11:0,33,470	0/0:11,0:11:30.06:0,30,408	0/0:6,0:6:6.02:0,6,86
chr10	34956653	.	CATTCTAAAGTATGCT	C	22057.07	PASS	AC=50;AF=0.926;AN=54;BaseQRankSum=5.546;DP=367;FS=69.810;HRun=0;HaplotypeScore=144.4121;InbreedingCoeff=0.8583;MQ=50.44;MQ0=8;MQRankSum=-5.724;QD=70.02;ReadPosRankSum=5.664;VQSLOD=1.6296;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,10:16:27.09:901,27,0	1/1:0,5:5:12.04:457,12,0	0/0:22,0:13:39.13:0,39,2355	0/0:19,0:13:35.96:0,36,2390	1/1:10,21:31:54.16:1980,54,0	1/1:0,12:12:27.09:1214,27,0	1/1:0,21:17:21.07:864,21,0	1/1:3,6:5:15:294,15,0	1/1:1,6:7:21.06:834,21,0	1/1:1,12:12:30.10:1219,30,0	1/1:0,13:13:18.06:800,18,0	1/1:0,13:13:18.06:730,18,0	1/1:0,10:10:21.07:944,21,0	1/1:1,8:8:21.07:944,21,0	1/1:2,10:11:15.52:675,16,0	1/1:0,9:8:12.04:540,12,0	1/1:2,5:7:15.05:675,15,0	1/1:0,7:7:12.04:540,12,0	1/1:2,5:4:9.01:111,9,0	1/1:1,24:25:45.15:1747,45,0	1/1:1,18:16:15.01:460,15,0	1/1:1,7:8:15.05:674,15,0	1/1:0,18:18:36.12:1618,36,0	./.	1/1:1,12:13:30.10:1349,30,0	1/1:0,10:10:30.10:1273,30,0	1/1:0,9:9:15.05:675,15,0	1/1:0,7:7:12.04:540,12,0
chr10	34956947	.	T	TA	18157.85	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=3.629;DP=562;FS=10.454;HRun=5;HaplotypeScore=144.0527;InbreedingCoeff=0.9905;MQ=69.68;MQ0=0;MQRankSum=-3.592;QD=34.00;ReadPosRankSum=3.208;VQSLOD=2.8305;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,18:20:51.17:671,51,0	0/0:7,0:7:21.05:0,21,225	0/0:14,0:14:33.03:0,33,324	0/0:7,0:7:18.05:0,18,193	1/1:1,29:29:63.20:823,63,0	1/1:2,21:23:54.18:708,54,0	1/1:0,8:8:21.07:276,21,0	1/1:4,28:32:84.26:1091,84,0	1/1:3,13:16:45.14:579,45,0	1/1:3,37:39:99:1354,105,0	1/1:4,20:24:60.19:783,60,0	1/1:1,17:18:51.17:671,51,0	1/1:2,17:19:51.17:671,51,0	1/1:2,16:18:48.16:628,48,0	1/1:1,15:16:42.14:553,42,0	1/1:1,15:16:45.15:592,45,0	1/1:0,21:21:54.18:710,54,0	1/1:0,8:8:18.06:237,18,0	1/1:1,14:15:42.11:534,42,0	1/1:2,40:37:99:1359,105,0	1/1:1,16:17:48.16:632,48,0	1/1:1,20:21:60.04:725,60,0	1/1:2,18:20:48.16:631,48,0	1/1:1,10:11:24.08:316,24,0	1/1:1,18:19:51.17:671,51,0	1/1:1,30:31:90.27:1167,90,0	1/1:2,27:28:75.24:987,75,0	1/1:0,20:20:60.20:789,60,0
chr10	34959521	.	CTACTTTGAAGCAGCCTTTAGTAAA	C	28673.88	PASS	AB=0.658;AC=35;AF=0.625;AN=56;BaseQRankSum=11.607;DP=491;FS=0.000;HRun=0;HaplotypeScore=376.6795;InbreedingCoeff=0.8460;MQ=66.13;MQ0=0;MQRankSum=-12.975;QD=98.88;ReadPosRankSum=5.869;VQSLOD=3.5013;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:48.16:0,48,5052	0/0:10,0:10:27.09:0,27,2385	0/0:21,0:21:54.18:0,54,3497	0/0:16,0:16:41.70:0,42,2406	0/0:27,0:27:81.28:0,81,8187	1/1:7,11:18:27.09:1762,27,0	1/1:2,9:11:24.08:1566,24,0	1/1:20,2:22:6.02:246,6,0	0/0:23,0:23:69.24:0,69,6366	1/1:7,8:15:24.08:1566,24,0	1/1:8,5:13:15.05:920,15,0	0/0:20,0:20:60.21:0,60,5547	1/1:7,9:16:27.09:1761,27,0	1/1:2,7:10:18.06:1174,18,0	1/1:6,10:16:30.10:1957,30,0	1/1:5,12:17:33.11:2153,33,0	0/0:20,0:20:57.20:0,57,5731	1/1:3,3:6:5.88:391,6,0	1/1:9,5:14:12.04:487,12,0	1/1:5,21:26:60.21:3777,60,0	1/1:11,5:16:6.02:343,6,0	1/1:3,18:21:51.18:3327,51,0	0/0:23,0:23:66.23:0,66,6225	0/0:25,0:25:66.23:0,66,7158	1/1:6,14:20:39.13:2544,39,0	0/1:12,13:25:55.83:1959,0,56	1/1:6,14:20:39.13:2545,39,0	1/1:3,1:4:3.01:196,3,0
chr10	34961045	.	CAG	C	540.74	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.835;DP=723;FS=1.032;HRun=0;HaplotypeScore=116.0927;InbreedingCoeff=0.9994;MQ=69.54;MQ0=3;MQRankSum=2.605;QD=33.80;ReadPosRankSum=2.257;VQSLOD=5.9529;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:72.18:0,72,1380	1/1:0,16:16:39.13:636,39,0	0/0:35,0:34:98.89:0,99,1765	0/0:39,0:37:99:0,101,1989	0/0:34,0:34:99:0,99,1994	0/0:33,0:33:99:0,99,1829	0/0:16,0:16:48.15:0,48,925	0/0:29,0:29:87.30:0,87,1766	0/0:19,0:19:57.20:0,57,1151	0/0:36,0:36:99:0,108,2113	0/0:34,0:33:99:0,99,1902	0/0:20,0:20:60.19:0,60,1139	0/0:22,0:22:66.23:0,66,1304	0/0:24,0:24:72.25:0,72,1452	0/0:27,0:26:78.27:0,78,1548	0/0:21,0:21:63.20:0,63,1223	0/0:26,0:26:69.21:0,69,1341	0/0:20,0:20:57.12:0,57,1057	0/0:14,0:14:42.14:0,42,788	0/0:41,0:40:99:0,120,2359	0/0:18,0:18:54.19:0,54,1096	0/0:28,0:28:84.26:0,84,1607	0/0:31,0:30:90.30:0,90,1790	0/0:18,0:18:51.17:0,51,1016	0/0:16,0:15:45.15:0,45,913	0/0:32,0:32:96.32:0,96,1910	0/0:37,0:37:99:0,108,2078	0/0:13,0:13:30.07:0,30,555
chr10	34961931	.	CT	C	16360.27	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-2.307;DP=664;FS=9.389;HRun=6;HaplotypeScore=85.4610;InbreedingCoeff=0.9964;MQ=75.60;MQ0=27;MQRankSum=-5.433;QD=26.43;ReadPosRankSum=5.279;VQSLOD=4.7134;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,45:47:99:1354,126,0	1/1:0,10:10:30.08:322,30,0	0/0:19,0:19:48.14:0,48,581	0/0:26,0:26:60.18:0,60,724	1/1:4,20:22:60.12:634,60,0	1/1:1,25:24:63.16:677,63,0	1/1:1,25:24:63.16:677,63,0	1/1:3,30:33:87.17:905,87,0	1/1:1,19:20:48.12:516,48,0	1/1:1,21:22:63.11:658,63,0	1/1:5,32:36:90.18:955,90,0	1/1:4,8:11:21.05:226,21,0	1/1:0,26:21:60.15:645,60,0	1/1:2,12:14:33.08:355,33,0	1/1:2,16:15:27.07:290,27,0	1/1:1,18:17:42.10:451,42,0	1/1:0,16:16:45.11:484,45,0	1/1:0,10:10:27.07:290,27,0	1/1:5,20:25:60.08:622,60,0	1/1:2,31:31:84.18:891,84,0	1/1:2,40:42:99:1225,114,0	1/1:0,17:15:45.11:483,45,0	1/1:3,24:27:72.17:774,72,0	1/1:1,20:21:54.14:580,54,0	1/1:0,22:22:48.12:516,48,0	1/1:5,23:27:63.14:670,63,0	1/1:1,22:20:51.13:548,51,0	1/1:0,21:19:57.14:612,57,0
chr10	34962541	.	TC	T	16785.83	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-0.019;DP=524;FS=25.738;HRun=2;HaplotypeScore=59.2636;InbreedingCoeff=0.9655;MQ=70.82;MQ0=0;MQRankSum=2.129;QD=34.83;ReadPosRankSum=6.608;VQSLOD=2.7224;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,16:16:45.15:584,45,0	1/1:0,6:5:9.03:117,9,0	0/0:22,0:21:60.98:0,61,855	0/0:20,0:19:48.16:0,48,711	1/1:1,15:14:36.12:468,36,0	1/1:0,23:23:66.21:857,66,0	1/1:0,11:11:33.11:429,33,0	1/1:0,28:28:81.26:1051,81,0	1/1:0,21:21:60.20:779,60,0	1/1:0,25:25:72.23:935,72,0	1/1:0,24:21:60.20:779,60,0	1/1:0,14:14:36.12:467,36,0	1/1:0,9:9:27.09:351,27,0	1/1:0,12:12:27.09:351,27,0	1/1:1,21:22:66.21:856,66,0	1/1:0,19:19:57.19:740,57,0	1/1:2,13:15:45.15:583,45,0	1/1:3,9:12:33.11:428,33,0	1/1:0,14:14:42.14:545,42,0	1/1:1,25:20:57.19:740,57,0	1/1:0,17:17:51.17:662,51,0	1/1:2,20:19:54.18:701,54,0	1/1:0,27:25:69.22:896,69,0	1/1:0,16:16:42.14:545,42,0	1/1:0,22:15:42.14:545,42,0	1/1:0,34:34:99:1325,102,0	1/1:0,25:25:63.20:818,63,0	1/1:0,6:6:18.06:234,18,0
chr10	34962661	.	CA	C	13120.97	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-3.659;DP=574;FS=11.735;HRun=9;HaplotypeScore=82.3438;InbreedingCoeff=0.9573;MQ=67.02;MQ0=1;MQRankSum=-4.114;QD=23.60;ReadPosRankSum=3.534;VQSLOD=4.9223;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,17:19:42.02:384,42,0	1/1:2,10:12:30.01:274,30,0	0/0:9,0:8:21.05:0,21,224	0/0:9,0:8:8.85:0,9,82	1/1:2,37:39:99:988,108,0	1/1:2,31:33:87.05:796,87,0	1/1:2,14:16:39.02:357,39,0	1/1:3,15:18:45.02:412,45,0	1/1:2,14:16:42.02:384,42,0	1/1:0,28:28:84.04:765,84,0	1/1:1,22:23:60.02:549,60,0	1/1:1,12:13:29.96:274,30,0	1/1:2,7:9:18:165,18,0	1/1:1,11:12:27.01:247,27,0	1/1:2,27:29:72.04:659,72,0	1/1:2,19:21:51.03:467,51,0	1/1:3,21:24:54.03:494,54,0	1/1:0,10:10:27.01:247,27,0	1/1:2,23:25:69.03:632,69,0	1/1:2,27:29:75.03:686,75,0	1/1:0,10:10:27.01:247,27,0	1/1:6,25:31:50.45:633,50,0	1/1:1,29:30:81.04:741,81,0	1/1:0,7:7:21.01:192,21,0	1/1:2,11:13:33.02:302,33,0	1/1:1,27:28:81.04:741,81,0	1/1:3,38:41:99:1016,111,0	1/1:0,20:20:51.03:467,51,0
chr10	34962850	.	C	CAG	26193.55	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-8.449;DP=632;FS=8.894;HRun=0;HaplotypeScore=63.5498;InbreedingCoeff=0.9462;MQ=83.36;MQ0=16;MQRankSum=-10.265;QD=44.78;ReadPosRankSum=6.185;VQSLOD=6.0931;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,17:21:57.19:1026,57,0	1/1:1,5:5:5.94:112,6,0	0/0:23,0:23:63.06:0,63,807	0/0:24,0:24:51.09:0,51,673	1/1:1,28:30:54.19:1010,54,0	1/1:4,29:30:75.26:1402,75,0	1/1:0,11:12:30.10:561,30,0	1/1:7,33:37:99:1736,99,0	1/1:0,17:17:42.14:785,42,0	1/1:1,21:23:63.22:1165,63,0	1/1:0,25:26:63.22:1178,63,0	1/1:0,14:14:33.11:617,33,0	1/1:3,17:19:42.14:776,42,0	1/1:3,20:21:54.19:1010,54,0	1/1:0,22:22:60.21:1121,60,0	1/1:2,23:24:63.22:1179,63,0	1/1:2,15:16:36.12:672,36,0	1/1:1,18:19:51.17:929,51,0	1/1:3,27:29:81.20:1320,81,0	1/1:2,33:35:93.32:1738,93,0	1/1:0,22:22:60.21:1122,60,0	1/1:1,22:23:54.19:1010,54,0	1/1:1,22:23:51.17:953,51,0	1/1:1,9:9:24.08:449,24,0	1/1:0,20:20:42.14:785,42,0	1/1:0,23:23:69.22:1251,69,0	1/1:5,32:34:90.31:1670,90,0	1/1:0,13:13:33.11:617,33,0
chr10	34963026	.	GA	G	16445.05	PASS	AB=0.647;AC=29;AF=0.518;AN=56;BaseQRankSum=14.527;DP=916;FS=144.703;HRun=1;HaplotypeScore=128.5032;InbreedingCoeff=-0.6450;MQ=60.39;MQ0=43;MQRankSum=1.286;QD=18.73;ReadPosRankSum=4.886;VQSLOD=0.7285;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:35,29:62:99:736,0,1427	0/1:8,14:21:99:480,0,238	0/0:18,0:18:42.25:0,42,601	0/0:20,0:18:36.64:0,37,609	1/1:0,36:36:99:1270,102,0	0/1:10,21:25:99:717,0,138	0/1:15,12:25:99:304,0,594	0/1:29,26:52:99:832,0,870	1/1:1,14:14:37.03:533,37,0	0/1:13,32:44:99:1143,0,441	0/1:26,17:43:99:624,0,724	0/1:15,15:26:99:467,0,493	0/1:13,17:25:99:506,0,403	0/1:19,17:33:99:638,0,529	0/1:10,17:20:99:447,0,187	0/1:17,15:26:99:536,0,400	1/1:0,14:14:36.12:499,36,0	0/1:9,6:14:99:169,0,312	0/1:14,20:30:99:653,0,363	0/1:15,33:47:99:1079,0,479	0/1:21,33:52:99:883,0,792	0/1:9,21:29:99:720,0,248	0/1:13,21:33:99:644,0,435	0/1:25,19:41:99:555,0,778	0/1:9,15:22:50.67:623,0,51	0/1:16,18:30:99:595,0,504	0/1:19,22:35:99:578,0,520	0/1:6,7:13:99:214,0,248
chr10	34963677	.	GCAGA	G	22594.41	PASS	AB=0.633;AC=29;AF=0.518;AN=56;BaseQRankSum=-2.533;DP=742;FS=72.800;HRun=0;HaplotypeScore=187.9864;InbreedingCoeff=-0.6450;MQ=53.52;MQ0=6;MQRankSum=-0.366;QD=32.05;ReadPosRankSum=2.530;VQSLOD=2.3186;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:7,18:25:99:951,0,333	0/1:7,9:16:99:464,0,484	0/0:20,0:20:45.15:0,45,1065	0/0:17,0:17:45.11:0,45,1069	1/1:1,28:29:75.26:1418,75,0	0/1:11,19:30:99:995,0,655	0/1:13,11:23:99:560,0,821	0/1:21,28:45:99:1420,0,509	1/1:0,22:21:63.22:1196,63,0	0/1:13,27:38:99:1317,0,548	0/1:9,17:26:99:842,0,463	0/1:9,13:22:99:623,0,586	0/1:14,15:28:99:670,0,676	0/1:5,22:27:99:1009,0,253	0/1:12,23:35:99:1213,0,575	0/1:5,22:26:95.19:1072,0,95	1/1:1,19:20:48.16:911,48,0	0/1:10,2:12:83.76:84,0,606	0/1:20,13:31:99:696,0,815	0/1:12,21:28:99:1110,0,450	0/1:12,9:21:99:297,0,679	0/1:7,19:26:99:903,0,260	0/1:12,16:25:99:683,0,428	0/1:6,5:11:99:264,0,141	0/1:8,23:30:99:1172,0,322	0/1:17,19:36:99:939,0,1131	0/1:15,26:41:99:1363,0,933	0/1:3,9:12:99:423,0,207
chr10	34963770	.	T	TCTCTCC	2221.74	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-2.689;DP=591;FS=2.357;HRun=0;HaplotypeScore=197.8898;InbreedingCoeff=0.9432;MQ=72.99;MQ0=1;MQRankSum=-4.686;QD=31.74;ReadPosRankSum=-2.180;VQSLOD=3.1533;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:81.28:0,81,1692	0/0:11,0:11:30.07:0,30,576	0/0:23,0:11:9.02:0,9,110	0/0:35,0:31:7.98:0,8,265	1/1:14,11:25:18.03:386,18,0	0/0:27,0:27:66.17:0,66,1251	0/0:16,0:16:39.13:0,39,830	0/0:20,0:20:19.24:0,19,336	1/1:13,10:25:45.15:1274,45,0	0/0:26,0:26:57.19:0,57,1169	0/0:14,0:14:27.08:0,27,537	0/0:23,0:23:54.13:0,54,1005	0/0:16,0:16:33.11:0,33,703	0/0:21,0:21:51.17:0,51,1067	0/0:22,0:22:48.05:0,48,874	0/0:19,0:19:36.11:0,36,713	1/1:16,4:20:27.03:702,27,0	0/0:10,0:10:24.07:0,24,471	0/0:12,0:12:15.02:0,15,277	0/0:32,0:32:69.24:0,69,1423	0/0:19,0:19:42.14:0,42,850	0/0:26,0:26:60.18:0,60,1149	0/0:19,0:19:45.15:0,45,938	0/0:12,0:12:33.10:0,33,625	0/0:22,0:22:48.10:0,48,958	0/0:23,0:23:54.17:0,54,1109	0/0:22,0:22:51.14:0,51,1001	0/0:21,0:21:60.18:0,60,1226
chr10	34964292	.	T	TAAAA	2629.92	PASS	AB=1.000;AC=10;AF=0.179;AN=56;BaseQRankSum=4.137;DP=562;FS=21.568;HRun=0;HaplotypeScore=170.2004;InbreedingCoeff=0.4795;MQ=73.52;MQ0=1;MQRankSum=-11.368;QD=23.48;ReadPosRankSum=-1.490;VQSLOD=1.6997;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:19,0:19:99:255,0,227	0/0:13,0:13:35.78:0,36,302	0/0:19,0:18:53.99:0,54,906	0/0:27,0:25:63.11:0,63,1088	1/1:10,18:28:44.95:1049,45,0	0/0:17,0:17:43.46:0,43,324	0/0:10,0:10:29.82:0,30,254	0/0:23,0:23:65.66:0,66,634	1/1:1,18:18:45.15:1110,45,0	0/0:31,0:31:83.78:0,84,791	0/0:25,0:25:71.67:0,72,593	0/1:14,0:10:28:28,0,158	0/0:19,0:19:50.52:0,51,378	0/0:18,0:18:44.76:0,45,397	0/0:23,0:23:65.75:0,66,558	0/0:21,0:21:56.77:0,57,486	1/1:1,1:2:5.98:93,6,0	0/0:5,0:5:14.94:0,15,116	0/0:13,0:13:37.06:0,37,347	0/0:27,0:27:77.27:0,77,658	0/0:19,0:18:47.85:0,48,477	0/0:28,0:28:80.68:0,81,683	0/1:23,0:22:99:236,0,105	0/1:6,0:4:16.03:16,0,58	0/0:31,0:30:83.64:0,84,691	0/0:41,0:41:99:0,119,1022	0/0:29,0:28:80.81:0,81,649	0/0:11,0:11:26.86:0,27,213
chr10	34964293	.	T	TAA	16226.94	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-1.251;DP=592;FS=0.000;HRun=8;HaplotypeScore=106.2159;InbreedingCoeff=0.7750;MQ=71.31;MQ0=4;MQRankSum=-6.799;QD=29.67;ReadPosRankSum=4.029;VQSLOD=4.5630;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:12,0:21:29.99:273,30,0	1/1:3,10:13:30.10:475,30,0	0/0:19,0:18:29.83:0,30,387	0/0:26,0:24:39.05:0,39,432	1/1:36,0:31:53.94:500,54,0	1/1:3,14:16:42.14:658,42,0	1/1:2,7:10:23.57:342,24,0	1/1:8,14:23:44.64:675,45,0	1/1:22,0:19:51.08:487,51,0	1/1:6,25:30:72.21:1087,72,0	1/1:4,23:25:64.92:1017,65,0	1/1:8,0:10:9.01:86,9,0	1/1:1,18:19:48.16:762,48,0	1/1:4,14:17:5.76:530,6,0	1/1:4,20:22:57.19:905,57,0	1/1:4,17:21:45.15:714,45,0	1/1:3,0:2:3:29,3,0	1/1:0,5:5:15.05:238,15,0	1/1:3,9:13:29.69:433,30,0	1/1:5,23:26:43.58:975,44,0	1/1:6,13:18:30.10:476,30,0	1/1:9,22:28:66.22:1041,66,0	1/1:7,0:22:32.91:291,33,0	1/1:6,0:4:3:29,3,0	1/1:2,28:30:78.27:1238,78,0	1/1:9,34:41:99:1546,99,0	1/1:4,23:26:66.22:1031,66,0	1/1:0,10:11:26.58:390,27,0
chr10	34964642	.	CT	C	7772.93	PASS	AB=0.550;AC=35;AF=0.625;AN=56;BaseQRankSum=1.542;DP=416;FS=3.277;HRun=4;HaplotypeScore=97.8132;InbreedingCoeff=0.8906;MQ=79.94;MQ0=7;MQRankSum=-4.451;QD=28.79;ReadPosRankSum=4.347;VQSLOD=4.5824;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:30.10:0,30,413	0/0:5,0:5:15.05:0,15,210	0/0:30,0:30:82.57:0,83,1081	0/0:25,0:25:61.21:0,61,744	0/0:13,0:12:30.06:0,30,397	1/1:3,15:16:42.13:501,42,0	1/1:0,12:12:30.09:360,30,0	1/1:5,24:26:72.22:863,72,0	0/0:15,0:15:39.13:0,39,545	1/1:2,14:14:42.13:504,42,0	1/1:1,13:13:39.12:460,39,0	0/0:14,0:13:39.01:0,39,476	1/1:3,10:12:27.08:324,27,0	1/1:1,7:7:18.05:216,18,0	1/1:1,13:14:33.10:395,33,0	1/1:1,15:16:42.13:504,42,0	0/0:11,0:11:27.05:0,27,356	0/1:2,9:11:11.34:294,0,11	1/1:0,13:13:36.11:432,36,0	1/1:0,9:9:24.07:288,24,0	1/1:3,24:27:60.18:714,60,0	1/1:6,7:10:4.10:232,4,0	0/0:17,0:14:33.11:0,33,462	0/0:4,0:4:9.03:0,9,126	1/1:2,14:14:42.13:501,42,0	1/1:3,16:18:48.15:576,48,0	1/1:4,13:15:39.12:468,39,0	1/1:1,4:4:12.04:144,12,0
chr10	34964806	.	TTG	T	1067.16	PASS	AB=0.783;AC=13;AF=0.232;AN=56;BaseQRankSum=9.820;DP=392;FS=14.558;HRun=0;HaplotypeScore=74.9512;InbreedingCoeff=-0.3198;MQ=83.75;MQ0=13;MQRankSum=-7.537;QD=4.87;ReadPosRankSum=0.691;VQSLOD=1.2932;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:16,12:26:99:333,0,607	0/0:7,1:7:21.07:0,21,392	0/0:19,0:19:26.28:0,26,677	0/0:17,0:17:9.81:0,10,627	0/0:11,0:11:27.09:0,27,486	0/1:6,6:7:66.45:66,0,259	0/1:8,8:11:60.95:61,0,363	0/0:17,2:16:1.02:0,1,683	0/0:7,0:7:18.06:0,18,336	0/1:11,2:11:11.01:11,0,527	0/0:7,0:6:18.06:0,18,315	0/1:9,2:9:16.93:17,0,403	0/1:11,3:11:60.98:61,0,365	0/1:9,3:11:54.90:55,0,470	0/0:10,3:9:21.07:0,21,391	0/1:11,3:11:33.87:34,0,418	0/0:16,0:16:48.14:0,48,863	0/0:7,1:7:18.06:0,18,337	0/1:12,4:16:99:131,0,534	0/0:12,0:11:30.10:0,30,538	0/1:21,9:25:99:115,0,837	0/0:6,0:6:15.05:0,15,260	0/0:10,2:10:30.10:0,30,559	0/1:14,8:22:99:127,0,595	0/1:9,1:8:23.02:23,0,277	0/1:15,6:19:99:184,0,659	0/0:11,1:9:27.09:0,27,499	0/0:6,0:6:15.05:0,15,280
chr10	34965196	.	A	AT	9142.14	PASS	AB=0.639;AC=44;AF=0.786;AN=56;BaseQRankSum=-8.125;DP=455;FS=24.425;HRun=7;HaplotypeScore=126.1415;InbreedingCoeff=0.1136;MQ=52.33;MQ0=18;MQRankSum=-0.836;QD=21.61;ReadPosRankSum=1.754;VQSLOD=3.2790;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,17:23:48.09:547,48,0	0/1:3,4:6:34.96:127,0,35	0/0:16,0:11:16.34:0,16,209	0/0:16,0:10:15.07:0,15,158	1/1:3,18:18:45.10:526,45,0	1/1:3,12:15:42.09:491,42,0	1/1:2,8:9:24.07:290,24,0	1/1:14,19:32:72.18:839,72,0	1/1:3,15:17:45.14:543,45,0	0/1:11,9:15:99:178,0,156	0/1:11,19:22:99:332,0,152	1/1:1,12:13:36.11:434,36,0	1/1:1,10:11:33.10:397,33,0	1/1:2,10:12:33.06:382,33,0	1/1:4,12:14:36.10:425,36,0	1/1:2,6:7:21.05:244,21,0	1/1:4,3:6:12.01:128,12,0	1/1:2,1:3:3.01:36,3,0	1/1:4,16:20:57.17:675,57,0	0/1:10,17:18:59.08:383,0,59	1/1:4,5:9:11.95:121,12,0	0/1:8,7:15:69.54:234,0,70	0/1:12,9:19:99:245,0,138	1/1:4,5:8:12.04:141,12,0	0/1:6,13:14:66.92:285,0,67	0/1:7,18:19:23.75:522,0,24	1/1:7,11:15:22.61:435,23,0	1/1:2,10:7:15.05:181,15,0
chr10	34965226	.	AT	A	8210.18	PASS	AB=0.637;AC=46;AF=0.821;AN=56;BaseQRankSum=-8.127;DP=464;FS=19.077;HRun=8;HaplotypeScore=108.7524;InbreedingCoeff=0.2316;MQ=54.17;MQ0=0;MQRankSum=0.094;QD=18.83;ReadPosRankSum=0.176;VQSLOD=3.5101;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,25:27:63.09:607,63,0	0/1:4,2:4:17.91:18,0,22	0/0:8,0:8:18.05:0,18,214	0/0:20,0:18:28.88:0,29,347	1/1:1,17:15:36.06:347,36,0	1/1:1,14:15:36.05:347,36,0	1/1:2,9:11:21.03:203,21,0	1/1:4,21:24:57.09:550,57,0	1/1:2,15:17:42.07:405,42,0	1/1:5,22:26:14.18:493,14,0	0/1:0,18:19:43.18:216,0,43	1/1:2,9:11:30.03:284,30,0	1/1:3,13:16:39.06:376,39,0	1/1:0,19:19:51.07:486,51,0	1/1:3,15:17:42.07:405,42,0	1/1:2,11:13:33.05:319,33,0	1/1:0,6:6:18.03:174,18,0	1/1:0,5:5:15.02:145,15,0	1/1:3,21:24:66.10:635,66,0	0/1:1,21:23:25.20:372,0,25	1/1:2,5:7:18.03:174,18,0	0/1:2,12:18:35.40:271,0,35	0/1:9,10:17:22.20:168,0,22	1/1:1,6:7:12.02:116,12,0	0/1:1,8:13:52.22:138,0,52	1/1:8,11:20:0.90:297,1,0	1/1:0,16:16:42.06:404,42,0	1/1:0,14:9:27.04:261,27,0
chr10	34965664	.	T	TC	7812.03	PASS	AB=0.542;AC=48;AF=0.857;AN=56;BaseQRankSum=-5.001;DP=359;FS=9.662;HRun=0;HaplotypeScore=42.9707;InbreedingCoeff=0.2234;MQ=38.54;MQ0=59;MQRankSum=0.088;QD=23.32;ReadPosRankSum=2.058;VQSLOD=5.4546;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,10:9:21.07:304,21,0	1/1:0,2:2:6.02:89,6,0	0/0:15,0:1:2.04:0,2,6	0/0:9,0:1:3:0,3,27	1/1:0,19:17:27.01:372,27,0	1/1:0,13:9:15.05:217,15,0	0/1:1,8:7:6.91:204,0,7	0/1:5,20:12:65.57:305,0,66	1/1:0,14:10:17.78:268,18,0	1/1:2,13:14:27.07:367,27,0	1/1:2,16:16:26.92:336,27,0	1/1:0,7:5:11.99:147,12,0	1/1:0,6:5:12.04:179,12,0	1/1:0,7:4:12.04:178,12,0	1/1:1,13:12:27.03:376,27,0	1/1:0,10:7:18.06:268,18,0	1/1:1,13:10:24.08:359,24,0	1/1:0,7:6:15.05:224,15,0	0/1:2,9:7:4.87:164,0,5	1/1:1,25:25:63.08:883,63,0	0/1:1,7:6:13.94:39,0,14	1/1:2,16:16:23.99:322,24,0	1/1:3,19:20:23.07:615,23,0	1/1:0,5:5:6.02:89,6,0	1/1:1,12:13:21:285,21,0	1/1:0,22:19:54.11:758,54,0	1/1:0,14:8:18.01:242,18,0	1/1:0,5:5:15.05:223,15,0
chr10	34966013	.	GA	G	167.07	PASS	AB=0.841;AC=7;AF=0.146;AN=48;BaseQRankSum=3.913;DP=202;FS=7.653;HRun=2;HaplotypeScore=34.9918;InbreedingCoeff=0.1834;MQ=36.08;MQ0=49;MQRankSum=-0.592;QD=3.89;ReadPosRankSum=0.134;VQSLOD=0.0048;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:9:15:0,15,198	0/0:3,0:2:6.02:0,6,90	0/0:18,0:5:3.08:0,3,156	0/0:15,0:4:8.92:0,9,100	1/1:3,5:7:5.96:45,6,0	0/0:4,0:2:6.02:0,6,82	0/0:4,0:4:6.02:0,6,88	./.	./.	0/0:18,0:11:17.43:0,17,281	0/0:9,0:6:6.90:0,7,80	0/1:8,0:5:13.92:14,0,30	./.	0/0:6,0:5:9.03:0,9,132	0/0:5,0:2:3.01:0,3,44	0/0:7,0:6:5.97:0,6,64	1/1:2,1:2:3.01:33,3,0	0/0:4,0:3:3.01:0,3,40	0/0:6,0:3:6.02:0,6,90	0/0:4,0:2:6.02:0,6,80	0/0:6,0:6:3.01:0,3,43	0/0:12,0:12:23.98:0,24,257	0/1:3,7:8:20.84:145,0,21	0/1:13,1:6:2.07:46,0,2	0/0:8,0:6:15.01:0,15,179	0/0:3,0:3:6.02:0,6,90	0/0:3,0:3:3.48:0,3,35	./.
chr10	34966017	.	GA	G	96.05	PASS	AB=0.588;AC=7;AF=0.159;AN=44;BaseQRankSum=3.812;DP=170;FS=3.795;HRun=2;HaplotypeScore=30.7683;InbreedingCoeff=0.2518;MQ=36.88;MQ0=48;MQRankSum=-1.205;QD=3.00;ReadPosRankSum=1.249;VQSLOD=-0.1388;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:6:12.04:0,12,167	0/0:3,0:2:6.02:0,6,88	0/0:16,0:5:14.72:0,15,170	0/0:15,0:4:8.98:0,9,103	1/1:4,2:5:3:25,3,0	0/0:4,0:2:2.99:0,3,24	0/0:2,0:2:5.98:0,6,59	./.	./.	0/0:16,0:9:9.12:0,9,156	0/0:7,0:4:3.01:0,3,36	./.	./.	0/0:5,0:4:8.93:0,9,78	0/0:4,0:1:2.96:0,3,19	0/0:7,0:5:3.01:0,3,33	1/1:2,0:1:2.90:16,3,0	./.	0/0:5,0:2:6.02:0,6,80	0/0:3,0:2:3.01:0,3,39	0/0:3,0:3:3.01:0,3,43	0/0:11,0:11:2.80:0,3,8	0/1:3,7:8:17.19:145,0,17	1/1:14,0:5:1.92:14,2,0	0/0:5,0:4:5.95:0,6,57	0/0:2,0:2:6.01:0,6,67	0/0:2,0:2:0.47:0,0,1	./.
chr10	34966073	.	GA	G	516.35	PASS	AB=0.843;AC=20;AF=0.667;AN=30;BaseQRankSum=-1.417;DP=110;FS=6.623;HRun=3;HaplotypeScore=67.1771;InbreedingCoeff=0.1878;MQ=20.67;MQ0=37;MQRankSum=-1.314;QD=8.20;ReadPosRankSum=0.256;VQSLOD=0.5183;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:8,3:10:27.48:81,0,27	1/1:1,0:1:3:28,3,0	./.	./.	0/0:8,0:5:0.89:0,1,3	./.	1/1:2,1:2:3.01:30,3,0	./.	./.	1/1:5,1:1:3:28,3,0	./.	./.	./.	./.	./.	0/0:5,0:3:0:0,0,0	./.	0/0:2,0:1:3.01:0,3,43	./.	1/1:1,5:5:15.01:136,15,0	1/1:4,2:6:3.01:30,3,0	1/1:1,1:2:3.01:30,3,0	0/0:7,0:6:5.55:0,6,13	0/1:16,2:8:22.82:23,0,25	1/1:0,2:2:6.01:57,6,0	1/1:2,3:3:9.02:88,9,0	./.	1/1:1,2:3:9.02:89,9,0
chr10	34966081	.	GA	G	1032.81	PASS	AC=30;AF=0.789;AN=38;BaseQRankSum=0.854;DP=130;FS=1.761;HRun=3;HaplotypeScore=74.7831;InbreedingCoeff=0.3211;MQ=21.78;MQ0=35;MQRankSum=0.336;QD=10.33;ReadPosRankSum=3.177;VQSLOD=1.4703;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:10:19.58:195,20,0	1/1:2,0:2:1.83:28,2,0	./.	0/0:4,0:1:3.01:0,3,41	1/1:3,5:5:12:113,12,0	./.	1/1:3,0:2:3:27,3,0	./.	./.	1/1:9,0:4:2.88:31,3,0	0/0:3,0:1:2.04:0,2,6	./.	1/1:5,0:3:3:26,3,0	./.	./.	0/0:5,0:3:0:0,0,0	1/1:3,1:3:2.37:8,2,0	0/0:2,0:1:3.01:0,3,43	./.	1/1:10,0:9:8.25:143,8,0	1/1:9,0:9:3:27,3,0	1/1:4,0:4:0.42:21,0,0	1/1:1,6:6:18.04:183,18,0	1/1:16,0:8:12.26:93,12,0	1/1:3,0:3:0.25:48,0,0	1/1:6,0:4:11.92:106,12,0	./.	1/1:3,0:3:9.01:85,9,0
chr10	34966089	.	GA	G	889.28	PASS	AB=0.954;AC=27;AF=0.675;AN=40;BaseQRankSum=1.945;DP=154;FS=10.863;HRun=3;HaplotypeScore=88.7142;InbreedingCoeff=0.1406;MQ=22.33;MQ0=36;MQRankSum=-3.349;QD=7.23;ReadPosRankSum=3.962;VQSLOD=-0.1125;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:12,0:11:19.80:88,0,20	1/1:2,0:2:0.51:24,1,0	0/0:4,0:2:6.02:0,6,75	0/1:10,0:3:0.57:1,0,74	1/1:8,0:5:12.02:122,12,0	./.	1/1:4,0:3:0.48:21,0,0	./.	./.	1/1:9,0:4:2.95:31,3,0	0/0:4,0:2:2.97:0,3,9	./.	1/1:5,0:3:2.98:22,3,0	./.	./.	0/0:5,0:3:0:0,0,0	1/1:4,0:3:3.01:36,3,0	0/0:2,0:1:3.01:0,3,38	./.	1/1:12,0:11:0.49:138,0,0	0/1:7,3:10:3.97:19,0,4	0/1:5,0:5:2.55:20,0,3	1/1:11,0:10:14.26:172,14,0	1/1:16,0:8:14.13:98,14,0	0/1:5,0:5:8.82:46,0,9	1/1:7,0:5:11.94:107,12,0	./.	1/1:3,0:3:7.56:60,8,0
chr10	34966096	.	AG	A	175.18	PASS	AB=0.765;AC=5;AF=0.125;AN=40;BaseQRankSum=3.559;DP=172;FS=9.592;HRun=2;HaplotypeScore=101.5389;InbreedingCoeff=0.0489;MQ=23.21;MQ0=30;MQRankSum=0.044;QD=4.87;ReadPosRankSum=2.303;VQSLOD=0.0367;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:6,5:11:99:133,0,149	0/0:2,0:2:6.02:0,6,77	0/0:11,0:6:14.72:0,15,190	0/0:12,0:4:12.01:0,12,138	0/0:10,0:7:14.91:0,15,122	./.	0/0:5,0:4:9.03:0,9,122	./.	./.	0/0:8,0:5:15.05:0,15,209	0/0:6,0:4:8.94:0,9,106	./.	1/1:3,1:3:3.01:38,3,0	./.	./.	./.	0/0:3,0:3:2.97:0,3,20	0/0:2,0:1:2.97:0,3,20	0/0:1,0:1:3.01:0,3,44	0/0:14,0:13:35.98:0,36,405	0/0:7,1:10:5.98:0,6,52	0/0:8,0:8:17.92:0,18,226	0/0:12,0:11:32.92:0,33,351	0/1:10,3:7:43.26:81,0,43	0/0:8,0:7:20.82:0,21,246	0/1:5,2:5:26.36:26,0,79	./.	0/0:3,0:3:9.02:0,9,108
chr10	34966111	.	A	AGG	2150.67	PASS	AB=1.000;AC=21;AF=0.477;AN=44;BaseQRankSum=0.627;DP=198;FS=39.227;HRun=2;HaplotypeScore=115.1729;InbreedingCoeff=0.5142;MQ=24.30;MQ0=26;MQRankSum=-0.824;QD=21.29;ReadPosRankSum=0.055;VQSLOD=-0.3021;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:29.07:0,29,376	0/1:6,0:5:11.70:12,0,17	0/0:20,0:6:18.05:0,18,260	0/0:20,0:4:12.04:0,12,186	0/1:18,0:15:11.72:12,0,33	./.	1/1:6,0:6:9.03:127,9,0	./.	./.	1/1:5,0:5:15.05:206,15,0	1/1:4,1:5:12.04:168,12,0	0/0:3,0:3:5.95:0,6,41	0/0:2,0:2:3.01:0,3,45	./.	0/0:2,0:2:3.01:0,3,46	./.	0/0:3,0:3:3.01:0,3,34	0/0:2,0:2:3.01:0,3,35	1/1:2,0:1:3.01:39,3,0	1/1:15,5:19:51.17:714,51,0	1/1:9,1:10:6.02:85,6,0	1/1:4,4:8:24.08:339,24,0	0/0:12,0:11:21.49:0,21,78	0/0:8,0:6:11.24:0,11,118	1/1:7,3:8:24.08:334,24,0	0/1:7,0:5:31.55:110,0,32	./.	1/1:3,1:4:12.04:168,12,0
chr10	34966112	.	A	AG	1271.53	PASS	AB=0.900;AC=20;AF=0.455;AN=44;BaseQRankSum=0.635;DP=198;FS=12.476;HRun=2;HaplotypeScore=115.9146;InbreedingCoeff=0.6249;MQ=24.30;MQ0=26;MQRankSum=0.428;QD=14.96;ReadPosRankSum=1.704;VQSLOD=2.3869;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:9,1:10:14.06:0,14,137	0/0:6,0:5:6.48:0,6,21	0/0:22,0:6:18.05:0,18,209	0/0:20,0:4:12.04:0,12,143	0/0:18,0:15:15.48:0,15,51	./.	1/1:6,0:6:9.01:83,9,0	./.	./.	1/1:5,0:5:14.88:109,15,0	1/1:5,0:5:12.02:115,12,0	0/0:3,0:3:5.87:0,6,35	0/0:2,0:2:2.97:0,3,20	./.	0/0:2,0:2:2.98:0,3,21	./.	0/0:3,0:3:3:0,3,25	0/0:2,0:2:1.82:0,2,5	1/1:2,0:1:2.96:19,3,0	1/1:20,0:19:51.03:464,51,0	1/1:8,2:10:6:56,6,0	1/1:8,0:8:24.01:219,24,0	0/0:12,0:11:20.08:0,20,56	0/1:6,2:6:4.08:4,0,36	1/1:10,0:8:24.01:216,24,0	0/1:7,0:5:4.38:53,0,4	./.	1/1:4,0:4:11.97:97,12,0
chr10	34966114	.	GA	G	1535.90	PASS	AB=1.000;AC=34;AF=0.773;AN=44;BaseQRankSum=4.623;DP=195;FS=14.347;HRun=2;HaplotypeScore=119.4708;InbreedingCoeff=0.4744;MQ=24.26;MQ0=27;MQRankSum=0.989;QD=11.29;ReadPosRankSum=3.269;VQSLOD=0.8775;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:10,0:10:28.44:28,0,88	1/1:6,0:5:12.94:70,13,0	0/0:23,0:6:18.06:0,18,257	0/0:20,0:4:12.04:0,12,180	1/1:18,0:15:26.32:157,26,0	./.	1/1:5,1:6:8.94:65,9,0	./.	./.	1/1:5,0:5:14.90:109,15,0	1/1:4,1:5:11.93:88,12,0	1/1:1,2:3:5.91:51,6,0	1/1:1,0:1:2.60:10,3,0	./.	0/0:2,0:2:0.89:0,1,2	./.	0/0:3,0:3:2.68:0,3,11	1/1:2,0:2:1.82:5,2,0	1/1:1,1:1:2.98:21,3,0	1/1:14,6:19:50.71:378,51,0	1/1:9,1:10:5.96:43,6,0	1/1:4,4:8:23.85:175,24,0	1/1:12,0:11:27.64:110,28,0	0/1:7,0:5:6.77:7,0,20	1/1:7,3:8:23.85:178,24,0	1/1:7,0:5:11.92:85,12,0	./.	1/1:3,1:4:11.93:89,12,0
chr10	34966115	.	A	AGGAGG	6299.81	PASS	AB=0.909;AC=31;AF=0.705;AN=44;BaseQRankSum=0.210;DP=211;FS=32.982;HRun=0;HaplotypeScore=132.7824;InbreedingCoeff=0.6117;MQ=24.59;MQ0=27;MQRankSum=-0.029;QD=43.75;ReadPosRankSum=2.229;VQSLOD=2.6386;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:9,0:10:4.43:4,0,136	1/1:0,0:5:14.99:179,15,0	0/0:24,0:6:18.06:0,18,380	0/0:20,0:4:12.04:0,12,271	1/1:6,0:18:32.82:315,33,0	./.	1/1:4,3:7:9.03:279,9,0	1/1:5,0:3:3.01:60,3,0	./.	1/1:1,5:6:18.06:539,18,0	1/1:4,3:7:14.97:377,15,0	0/0:3,0:3:3.37:0,3,9	0/0:1,0:1:2.84:0,3,14	./.	0/0:2,0:2:2.99:0,3,23	./.	./.	1/1:2,0:2:1.82:5,2,0	1/1:2,1:2:3.01:99,3,0	1/1:8,13:20:51.18:1603,51,0	1/1:7,3:10:6.02:179,6,0	1/1:6,4:10:27.09:785,27,0	1/1:1,0:12:35.96:385,36,0	0/0:7,0:5:7.82:0,8,44	1/1:3,7:8:24.08:754,24,0	1/1:5,3:6:2.76:363,3,0	./.	1/1:2,3:5:12.04:373,12,0
chr10	34966167	.	TTCCTATTTCCTATTTC	T	15301.53	PASS	AC=48;AF=0.923;AN=52;BaseQRankSum=4.183;DP=174;FS=2.887;HRun=0;HaplotypeScore=143.9445;InbreedingCoeff=0.4511;MQ=39.09;MQ0=8;MQRankSum=-4.208;QD=98.72;ReadPosRankSum=3.347;VQSLOD=4.9957;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,0:1:3.01:49,3,0	1/1:0,4:3:9.03:440,9,0	0/0:12,0:4:12.04:0,12,854	0/0:6,0:6:15.94:0,16,649	1/1:0,20:22:60.16:2480,60,0	1/1:0,3:3:6.02:293,6,0	1/1:0,5:7:12.04:518,12,0	1/1:0,0:3:9.03:202,9,0	1/1:0,2:2:3.01:147,3,0	1/1:0,3:4:12.04:518,12,0	1/1:0,10:13:33.11:1383,33,0	1/1:0,4:4:9.03:440,9,0	1/1:0,1:2:6.02:195,6,0	1/1:0,3:3:6.02:293,6,0	1/1:0,1:1:3.01:147,3,0	1/1:0,3:3:6.02:293,6,0	./.	1/1:0,3:3:6.02:293,6,0	1/1:0,2:3:9.03:370,9,0	1/1:1,12:19:51.17:1893,51,0	1/1:0,0:1:3.01:49,3,0	1/1:0,5:9:27.09:1019,27,0	1/1:0,7:14:39.13:1309,39,0	./.	1/1:0,7:10:27.09:1017,27,0	1/1:0,3:4:9.03:342,9,0	1/1:0,5:4:3.01:147,3,0	1/1:1,9:10:30.10:1466,30,0
chr10	34966177	.	C	CA	661.82	PASS	AB=0.844;AC=14;AF=0.280;AN=50;BaseQRankSum=-5.312;DP=180;FS=5.362;HRun=0;HaplotypeScore=141.1623;InbreedingCoeff=-0.0471;MQ=38.41;MQ0=12;MQRankSum=-0.569;QD=5.86;ReadPosRankSum=-6.521;VQSLOD=1.8662;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	./.	0/0:4,0:3:6.66:0,7,20	0/0:15,0:4:12.04:0,12,168	0/0:9,0:6:13.86:0,14,167	0/1:22,2:24:34.29:149,0,34	0/0:3,0:3:4.44:0,4,13	0/1:5,1:6:10.42:38,0,10	1/1:1,2:2:6.02:96,6,0	0/0:2,0:2:2.22:0,2,7	0/1:7,1:8:18.19:36,0,18	0/1:10,2:12:0.79:1,0,26	0/0:5,0:5:9.67:0,10,55	0/0:1,0:1:2.22:0,2,7	0/0:3,1:3:4.44:0,4,13	0/0:2,0:2:2.22:0,2,7	0/0:3,0:3:4.44:0,4,13	./.	0/0:3,0:3:4.44:0,4,14	0/1:2,1:3:5.83:41,0,6	0/1:14,1:15:31.79:40,0,32	./.	0/1:5,3:8:13.23:123,0,13	0/1:7,4:10:18.04:121,0,18	1/1:1,0:1:2.37:8,2,0	0/1:9,4:11:11.23:126,0,11	0/0:4,0:3:4.44:0,4,13	0/1:9,0:8:1.44:18,0,1	0/0:10,0:10:22.20:0,22,66
chr10	34966181	.	TTC	T	1998.24	PASS	AB=0.976;AC=36;AF=0.750;AN=48;BaseQRankSum=4.263;DP=177;FS=7.420;HRun=0;HaplotypeScore=139.3464;InbreedingCoeff=0.1468;MQ=38.61;MQ0=11;MQRankSum=-3.929;QD=13.41;ReadPosRankSum=5.392;VQSLOD=2.7951;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	1/1:4,0:3:8.95:65,9,0	0/0:14,0:4:12.04:0,12,228	0/0:9,0:6:13.29:0,13,230	1/1:22,2:24:34.79:350,35,0	1/1:3,0:3:5.97:43,6,0	0/1:6,0:6:6.71:53,0,7	0/0:2,1:2:5.95:0,6,41	1/1:2,0:2:2.98:22,3,0	1/1:4,4:8:3.71:212,4,0	1/1:12,0:12:26.87:212,27,0	0/1:5,0:5:24.87:53,0,25	1/1:1,0:1:2.98:21,3,0	1/1:4,0:3:5.96:43,6,0	1/1:1,1:2:5.94:40,6,0	1/1:3,0:3:5.97:43,6,0	./.	1/1:3,0:3:5.97:43,6,0	0/1:3,0:3:10.64:34,0,11	1/1:14,1:15:19.95:264,20,0	./.	0/1:8,0:8:31.46:84,0,31	0/1:11,0:10:28.48:103,0,28	./.	0/1:10,2:10:10.87:121,0,11	1/1:3,1:3:8.98:82,9,0	1/1:5,4:8:5.96:42,6,0	1/1:10,0:10:29.83:217,30,0
chr10	34966247	.	A	AT	1999.52	PASS	AB=0.556;AC=33;AF=0.868;AN=38;BaseQRankSum=0.268;DP=107;FS=2.012;HRun=0;HaplotypeScore=41.8200;InbreedingCoeff=0.2240;MQ=58.77;MQ0=19;MQRankSum=-2.914;QD=21.73;ReadPosRankSum=1.234;VQSLOD=5.1292;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,3:3:9.03:136,9,0	./.	0/0:6,0:2:6:0,6,64	0/0:5,0:3:1.87:0,2,6	1/1:0,10:8:24.08:370,24,0	0/1:1,4:2:6.72:41,0,7	./.	./.	./.	1/1:0,8:5:15.05:234,15,0	1/1:1,8:6:12.04:186,12,0	1/1:1,0:1:2.94:18,3,0	1/1:2,2:1:3.01:47,3,0	1/1:0,4:2:6.02:92,6,0	1/1:2,1:3:3.01:47,3,0	1/1:0,2:1:3.01:46,3,0	./.	1/1:0,1:1:3.01:47,3,0	./.	1/1:0,11:7:18.06:278,18,0	./.	./.	1/1:0,2:2:6.02:93,6,0	1/1:0,1:1:3.01:47,3,0	1/1:2,11:7:18.06:279,18,0	1/1:1,6:1:3.01:47,3,0	1/1:0,8:5:6.02:93,6,0	./.
chr10	34967351	.	TA	T	552.78	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.335;DP=566;FS=0.000;HRun=1;HaplotypeScore=163.0259;InbreedingCoeff=0.9952;MQ=87.22;MQ0=0;MQRankSum=-1.825;QD=29.09;ReadPosRankSum=1.477;VQSLOD=3.3548;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,19:19:54.17:648,54,0	0/0:14,0:14:41.84:0,42,321	0/0:25,0:25:65.38:0,65,1055	0/0:14,0:14:36.09:0,36,553	0/0:33,0:33:92.66:0,93,720	0/0:30,0:30:84.18:0,84,655	0/0:10,0:10:26.87:0,27,203	0/0:33,0:33:77.17:0,77,531	0/0:28,0:28:80.72:0,81,629	0/0:18,0:18:53.37:0,53,370	0/0:17,0:17:47.86:0,48,384	0/0:19,0:19:50.82:0,51,398	0/0:16,0:16:44.84:0,45,351	0/0:14,0:14:35.88:0,36,285	0/0:22,0:22:62.76:0,63,494	0/0:9,0:9:26.91:0,27,220	0/0:29,0:29:80.74:0,81,631	0/0:22,0:22:62.74:0,63,482	0/0:16,0:16:38.66:0,39,272	0/0:27,0:27:80.78:0,81,647	0/0:21,0:21:53.80:0,54,417	0/0:25,0:25:71.74:0,72,562	0/0:14,0:14:38.88:0,39,315	0/0:21,0:21:53.81:0,54,424	0/0:12,0:12:35.84:0,36,271	0/0:21,0:21:53.45:0,53,377	0/0:29,0:29:83.80:0,84,686	0/0:8,0:8:23.94:0,24,191
chr10	34967500	.	T	TA	11135.85	PASS	AB=1.000;AC=45;AF=0.804;AN=56;BaseQRankSum=4.072;DP=557;FS=1.311;HRun=9;HaplotypeScore=115.6766;InbreedingCoeff=0.8914;MQ=65.52;MQ0=2;MQRankSum=-1.354;QD=25.25;ReadPosRankSum=0.740;VQSLOD=3.8469;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:80.96:0,81,697	1/1:1,7:8:17.63:198,18,0	0/1:15,0:12:9.65:10,0,159	0/0:8,0:8:20.62:0,21,148	0/0:33,0:33:83.94:0,84,722	1/1:2,20:22:57.15:631,57,0	1/1:3,12:16:32.92:346,33,0	1/1:5,28:33:81.20:887,81,0	0/0:26,0:26:71.97:0,72,625	1/1:2,30:32:81.11:848,81,0	1/1:3,20:22:54.15:597,54,0	1/1:1,10:11:30.08:332,30,0	1/1:3,14:17:39.11:431,39,0	1/1:4,10:14:21.06:232,21,0	1/1:6,17:23:48.13:531,48,0	1/1:2,8:10:21.06:232,21,0	0/0:20,0:20:59.99:0,60,521	1/1:0,8:8:21.06:231,21,0	1/1:3,19:22:57.10:601,57,0	1/1:5,23:27:63.17:697,63,0	1/1:2,16:18:48.13:531,48,0	1/1:3,17:18:42.11:464,42,0	1/1:1,15:15:39.11:431,39,0	1/1:3,25:28:69.19:763,69,0	1/1:1,13:13:30.08:332,30,0	1/1:1,27:29:84:880,84,0	1/1:2,25:26:66.18:730,66,0	1/1:0,7:7:18.05:199,18,0
chr10	34968486	.	CATTG	C	14947.43	PASS	AB=0.642;AC=24;AF=0.462;AN=52;BaseQRankSum=-12.525;DP=764;FS=35.656;HRun=0;HaplotypeScore=152.9346;InbreedingCoeff=-0.7038;MQ=41.92;MQ0=83;MQRankSum=2.835;QD=22.55;ReadPosRankSum=4.672;VQSLOD=2.6998;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:9,15:22:99:397,0,529	0/1:8,11:18:99:392,0,648	./.	./.	0/0:33,0:32:72.25:0,72,2066	0/1:12,21:29:99:802,0,709	0/1:18,10:17:99:391,0,533	0/1:11,15:19:99:675,0,125	0/0:16,0:15:42.13:0,42,1133	0/1:13,16:23:99:718,0,691	0/1:16,19:33:99:625,0,1130	0/1:9,8:12:99:342,0,370	0/1:5,12:15:99:343,0,398	0/1:8,10:18:99:394,0,645	0/1:15,19:31:99:558,0,940	0/1:7,10:16:99:581,0,359	0/0:20,0:19:33.10:0,33,888	0/1:9,17:25:99:632,0,635	0/1:16,16:28:99:742,0,1034	0/1:22,29:46:99:1203,0,1421	0/1:15,21:32:99:522,0,992	0/1:24,29:47:99:1192,0,1409	0/1:18,19:27:99:740,0,711	0/1:9,17:23:99:805,0,376	0/1:11,17:27:99:858,0,866	0/1:14,22:34:99:1149,0,1083	0/1:18,11:25:99:511,0,1056	1/1:2,10:10:18.06:374,18,0
chr10	34968578	.	TA	T	2507.66	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=7.308;DP=453;FS=21.210;HRun=10;HaplotypeScore=61.3653;InbreedingCoeff=0.7833;MQ=47.50;MQ0=41;MQRankSum=-0.735;QD=7.04;ReadPosRankSum=0.181;VQSLOD=0.2619;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,10:15:17.03:136,17,0	0/0:10,0:10:12.03:0,12,133	0/0:9,0:5:9.02:0,9,100	0/0:9,0:9:10.77:0,11,128	0/0:33,0:32:72.19:0,72,796	1/1:5,5:11:12.10:70,12,0	1/1:1,3:6:6.85:37,7,0	1/1:7,1:8:1.54:4,2,0	0/0:21,0:21:54.13:0,54,588	1/1:7,14:15:29.03:240,29,0	1/1:3,14:17:16.71:101,17,0	1/1:3,7:11:16.07:116,16,0	1/1:2,8:12:24.11:174,24,0	1/1:1,11:11:20.03:162,20,0	1/1:5,10:14:14.99:130,15,0	1/1:5,5:10:16.94:127,17,0	0/0:14,0:14:39.10:0,39,424	1/1:3,6:12:15.10:96,15,0	1/1:12,5:22:21.49:154,21,0	1/1:7,15:29:32.03:197,32,0	1/1:0,3:3:2.04:6,2,0	1/1:8,11:17:11.99:104,12,0	1/1:5,9:14:16.07:116,16,0	1/1:1,4:5:2.74:12,3,0	1/1:3,11:13:9:78,9,0	1/1:6,15:19:37.06:299,37,0	1/1:3,28:23:7:302,7,0	1/1:2,2:4:2.99:26,3,0
chr10	34969078	.	TTAACTC	T	4809.27	PASS	AB=0.769;AC=27;AF=0.563;AN=48;BaseQRankSum=3.773;DP=484;FS=15.976;HRun=0;HaplotypeScore=73.3255;InbreedingCoeff=0.1906;MQ=25.05;MQ0=162;MQRankSum=-3.114;QD=15.92;ReadPosRankSum=0.479;VQSLOD=2.6970;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:9,4:4:9.03:230,9,0	0/1:13,3:14:40.67:41,0,1006	./.	./.	0/0:28,0:25:33:0,33,927	1/1:6,6:5:6.02:153,6,0	0/1:6,4:4:99:144,0,103	1/1:17,7:6:18.06:422,18,0	0/0:15,0:10:12.04:0,12,450	0/1:27,6:25:1.60:2,0,2530	0/1:18,4:16:52.64:53,0,664	1/1:6,6:9:17.85:460,18,0	0/1:8,7:9:97.39:292,0,97	1/1:4,6:7:15.05:384,15,0	1/1:5,6:4:9.03:229,9,0	1/1:7,12:12:27.09:691,27,0	0/0:16,0:7:9.03:0,9,338	1/1:3,4:4:12.04:307,12,0	0/1:10,6:6:81.33:364,0,81	0/0:20,3:14:30.10:0,30,980	./.	0/1:19,4:18:43.34:43,0,1092	0/0:18,1:13:18.06:0,18,602	1/1:6,4:4:6.02:153,6,0	0/0:15,1:11:8.95:0,9,337	0/1:11,9:13:99:498,0,638	0/1:18,11:21:99:342,0,840	./.
chr10	34969101	.	TGATAGATA	T	215.43	PASS	AB=0.921;AC=8;AF=0.267;AN=30;BaseQRankSum=3.423;DP=440;FS=6.850;HRun=0;HaplotypeScore=97.7778;InbreedingCoeff=0.2198;MQ=28.29;MQ0=126;MQRankSum=-3.566;QD=2.95;ReadPosRankSum=1.389;VQSLOD=1.1339;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:7:3.01:0,3,94	0/1:13,0:13:46.83:47,0,233	./.	./.	0/0:28,0:27:30.10:0,30,1089	0/0:11,0:4:3.01:0,3,36	0/0:9,0:6:3.01:0,3,46	./.	./.	0/0:34,0:29:24.08:0,24,876	0/0:24,0:19:24.08:0,24,917	./.	./.	./.	./.	./.	0/0:14,1:10:3.01:0,3,39	1/1:6,1:5:3.01:73,3,0	1/1:14,0:6:3.01:54,3,0	0/0:18,0:11:3.01:0,3,34	./.	0/0:15,0:15:6:0,6,145	./.	./.	1/1:10,7:14:3.01:73,3,0	0/1:18,1:12:72.81:73,0,112	0/0:27,0:21:29.94:0,30,1107	./.
chr10	34971164	.	CTGCATAG	C	14435.67	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=11.870;DP=549;FS=7.780;HRun=0;HaplotypeScore=165.8482;InbreedingCoeff=0.9630;MQ=49.15;MQ0=10;MQRankSum=-13.573;QD=42.96;ReadPosRankSum=-0.601;VQSLOD=3.7498;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,43:51:87.25:2095,87,0	0/0:7,0:7:21.07:0,21,819	0/0:26,0:11:30.10:0,30,1010	0/0:34,0:15:33.10:0,33,960	0/0:19,0:19:51.18:0,51,1993	1/1:2,13:15:27.09:700,27,0	1/1:6,14:20:36.12:904,36,0	1/1:3,17:20:51.13:1189,51,0	0/0:21,0:21:63.22:0,63,2422	1/1:3,20:21:48.14:1188,48,0	1/1:1,11:12:15.05:373,15,0	0/0:18,0:18:48.16:0,48,1913	1/1:0,6:6:18.06:467,18,0	1/1:6,12:18:36.12:926,36,0	1/1:1,14:15:27.09:699,27,0	1/1:3,9:12:24.08:622,24,0	0/0:48,0:48:99:0,138,4925	1/1:1,11:12:24.08:623,24,0	1/1:2,14:16:42.10:912,42,0	1/1:2,16:16:18.06:460,18,0	1/1:7,18:25:14.87:303,15,0	1/1:3,23:26:27.05:584,27,0	0/0:19,0:19:42.13:0,42,1551	0/0:21,0:21:57.20:0,57,2202	1/1:2,12:13:24.08:622,24,0	1/1:4,14:18:42.14:1069,42,0	1/1:2,10:12:24.08:622,24,0	1/1:0,2:2:3.01:78,3,0
chr10	34971363	.	A	ACTCAAGAG	36551.94	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=11.004;DP=480;FS=1.830;HRun=0;HaplotypeScore=165.1514;InbreedingCoeff=0.9901;MQ=57.85;MQ0=0;MQRankSum=-14.875;QD=100.42;ReadPosRankSum=-0.740;VQSLOD=5.3442;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,21:27:75.26:3306,75,0	1/1:2,10:12:33.10:1383,33,0	0/0:21,0:21:63.12:0,63,1646	0/0:16,0:16:41.71:0,42,932	0/0:23,0:22:66.23:0,66,1975	1/1:4,7:11:30.10:1131,30,0	1/1:5,17:22:66.23:2785,66,0	1/1:3,11:12:33.08:1229,33,0	0/0:30,0:30:87.28:0,87,2515	1/1:9,10:17:51.11:1893,51,0	1/1:1,15:13:39.13:1611,39,0	1/1:3,12:15:39.13:1686,39,0	1/1:4,4:9:15.05:601,15,0	1/1:8,11:19:48.16:1947,48,0	1/1:7,10:17:45.15:1837,45,0	1/1:10,5:15:36.08:1215,36,0	0/0:26,0:26:75.23:0,75,2079	1/1:1,5:6:18.04:711,18,0	1/1:6,8:14:42.14:1714,42,0	1/1:11,7:12:33.11:1306,33,0	1/1:6,9:15:39.13:1600,39,0	1/1:3,15:14:42.14:1881,42,0	1/1:8,14:19:51.09:1789,51,0	1/1:6,13:19:35.89:1394,36,0	1/1:3,9:11:27.09:1219,27,0	1/1:5,9:12:33.08:1263,33,0	1/1:9,14:23:53.86:2367,54,0	1/1:0,5:5:15.05:684,15,0
chr10	34971369	.	TG	T	10816.16	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=13.675;DP=493;FS=0.405;HRun=2;HaplotypeScore=186.0176;InbreedingCoeff=0.9929;MQ=59.13;MQ0=0;MQRankSum=-14.998;QD=28.54;ReadPosRankSum=0.730;VQSLOD=4.4050;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,32:32:78.23:904,78,0	1/1:0,12:12:33.10:393,33,0	0/0:19,0:19:54.16:0,54,759	0/0:15,0:15:35.83:0,36,418	0/0:25,0:24:72.24:0,72,1075	1/1:0,13:13:33.10:387,33,0	1/1:0,24:24:63.17:719,63,0	1/1:0,16:14:39.13:496,39,0	0/0:30,0:30:90.30:0,90,1345	1/1:0,17:15:45.14:570,45,0	1/1:0,17:14:41.78:441,42,0	1/1:0,18:18:39.12:477,39,0	1/1:0,9:9:21.07:264,21,0	1/1:0,18:18:45.13:531,45,0	1/1:2,16:18:51.16:616,51,0	1/1:0,14:14:39.12:476,39,0	0/0:25,0:25:72.21:0,72,1036	1/1:2,5:6:18.06:224,18,0	1/1:0,14:14:42.13:535,42,0	1/1:0,18:11:30.56:354,31,0	1/1:0,15:15:37.82:363,38,0	1/1:0,21:17:42.12:479,42,0	1/1:1,20:18:50.80:539,51,0	1/1:0,20:20:35.06:407,35,0	1/1:0,13:12:30.09:355,30,0	1/1:0,13:11:33.10:410,33,0	1/1:0,24:24:57.18:689,57,0	1/1:0,5:5:15.05:186,15,0
chr10	34972177	.	TC	T	14984.91	PASS	AB=0.962;AC=47;AF=0.839;AN=56;BaseQRankSum=11.111;DP=575;FS=0.000;HRun=2;HaplotypeScore=96.8155;InbreedingCoeff=0.8645;MQ=63.41;MQ0=2;MQRankSum=-2.199;QD=31.75;ReadPosRankSum=4.757;VQSLOD=4.4341;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,19:20:48.16:623,48,0	1/1:0,12:12:18.06:233,18,0	0/0:34,1:34:51.76:0,52,1154	0/0:26,0:23:44.43:0,44,888	0/0:31,0:31:93.31:0,93,1391	1/1:0,20:20:51.17:662,51,0	1/1:0,18:18:42.14:545,42,0	1/1:1,10:11:30.08:374,30,0	0/0:9,0:9:27.09:0,27,403	1/1:0,24:24:72.23:935,72,0	1/1:0,29:29:63.20:813,63,0	1/1:0,17:17:42.14:545,42,0	1/1:0,16:16:45.15:584,45,0	1/1:0,20:20:54.18:701,54,0	1/1:0,9:9:21.07:273,21,0	1/1:0,15:15:45.15:584,45,0	0/1:23,1:23:26.16:26,0,704	1/1:2,13:15:39.11:490,39,0	1/1:0,11:9:27.09:351,27,0	1/1:0,29:29:75.24:968,75,0	1/1:0,20:20:57.19:740,57,0	1/1:0,20:20:57.19:740,57,0	1/1:0,24:24:48.02:623,48,0	1/1:0,14:14:36.12:467,36,0	1/1:0,23:23:60.20:779,60,0	1/1:0,24:24:72.19:901,72,0	1/1:0,35:34:96.31:1246,96,0	1/1:0,21:21:60.20:779,60,0
chr10	34972877	.	A	ATG	22783.28	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=5.106;DP=594;FS=1.729;HRun=0;HaplotypeScore=100.5015;InbreedingCoeff=0.9954;MQ=67.85;MQ0=2;MQRankSum=-2.133;QD=48.68;ReadPosRankSum=4.420;VQSLOD=5.8195;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,32:34:81.28:1561,81,0	1/1:2,5:7:15.05:289,15,0	0/0:29,0:28:78.13:0,78,1093	0/0:27,0:25:62.33:0,62,913	0/0:31,0:31:84.27:0,84,1254	1/1:1,25:24:63.19:1179,63,0	1/1:2,17:20:48.11:867,48,0	1/1:4,21:24:66.22:1214,66,0	0/0:17,0:17:48.15:0,48,713	1/1:0,33:33:99:1805,99,0	1/1:0,19:19:51.17:981,51,0	1/1:0,8:9:24.08:463,24,0	1/1:0,16:16:48.16:926,48,0	1/1:0,24:25:69.24:1332,69,0	1/1:1,13:14:39.13:753,39,0	1/1:2,22:24:60.21:1158,60,0	0/0:22,0:22:63.21:0,63,964	1/1:6,21:27:66.23:1273,66,0	1/1:1,12:12:33.11:637,33,0	1/1:2,18:20:27.09:519,27,0	1/1:1,22:23:60.21:1155,60,0	1/1:0,19:19:51.17:980,51,0	1/1:0,20:20:51.65:981,52,0	1/1:1,16:17:51.17:964,51,0	1/1:0,18:19:45.15:864,45,0	1/1:0,16:16:45.12:801,45,0	1/1:2,26:28:78.27:1502,78,0	1/1:1,13:14:30.10:579,30,0
chr10	34973151	.	TTA	T	2012.46	PASS	AB=0.760;AC=34;AF=0.654;AN=52;BaseQRankSum=3.369;DP=218;FS=69.909;HRun=0;HaplotypeScore=27.2583;InbreedingCoeff=0.6545;MQ=46.53;MQ0=8;MQRankSum=-5.939;QD=15.97;ReadPosRankSum=2.459;VQSLOD=1.0720;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:11,0:9:1.83:86,0,2	1/1:3,0:3:9.01:81,9,0	./.	0/0:9,0:5:9.99:0,10,116	0/0:23,0:23:60.59:0,61,894	1/1:0,4:4:9.03:133,9,0	1/1:0,2:1:3.01:44,3,0	0/0:3,1:1:0.89:0,1,2	0/0:10,0:11:15.35:0,15,514	1/1:0,5:5:12.04:175,12,0	1/1:1,9:9:15.01:196,15,0	0/0:4,0:5:14.63:0,15,181	./.	1/1:2,4:6:12.04:163,12,0	1/1:0,2:2:6.02:88,6,0	1/1:1,6:7:11.77:143,12,0	0/0:15,0:14:42.05:0,42,579	1/1:2,8:9:9.03:133,9,0	1/1:1,2:3:8.89:85,9,0	1/1:5,11:15:1.12:84,1,0	1/1:0,2:2:3.01:44,3,0	0/1:1,11:13:1.06:136,0,1	0/0:14,0:14:29.95:0,30,437	0/0:5,0:5:8.64:0,9,66	1/1:0,9:9:8.98:132,9,0	1/1:1,8:9:23.59:221,24,0	1/1:2,5:7:11.96:154,12,0	1/1:0,7:7:6.02:89,6,0
chr10	34973629	.	T	TAAA	11066.36	PASS	AC=52;AF=1.000;AN=52;BaseQRankSum=-2.264;DP=509;FS=3.025;HRun=6;HaplotypeScore=90.7905;InbreedingCoeff=-0.0143;MQ=35.55;MQ0=19;MQRankSum=0.755;QD=23.20;ReadPosRankSum=-0.727;VQSLOD=1.7029;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,0:16:23.80:281,24,0	1/1:7,0:8:12.04:164,12,0	./.	./.	1/1:8,0:33:29.87:106,30,0	1/1:6,17:22:27.08:534,27,0	1/1:4,10:13:24.08:480,24,0	1/1:4,12:14:30.10:617,30,0	1/1:5,0:28:23.67:53,24,0	1/1:7,22:27:45.24:1195,45,0	1/1:6,16:18:36.12:637,36,0	1/1:3,0:9:14.68:102,15,0	1/1:4,8:14:12.02:214,12,0	1/1:7,15:21:21.04:379,21,0	1/1:4,9:10:15.05:318,15,0	1/1:1,10:12:24.07:473,24,0	1/1:1,0:17:18.63:42,19,0	1/1:2,6:7:9.03:191,9,0	1/1:1,8:9:27.05:495,27,0	1/1:2,22:23:24.04:438,24,0	1/1:1,3:2:3.01:64,3,0	1/1:3,13:16:27.05:529,27,0	1/1:2,0:19:35.84:287,36,0	1/1:2,0:7:11.93:90,12,0	1/1:2,17:21:21.07:410,21,0	1/1:4,27:31:81.03:1578,81,0	1/1:8,18:28:42.12:803,42,0	1/1:5,13:18:30.10:588,30,0
chr10	34974841	.	CA	C	1656.11	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.090;DP=697;FS=7.287;HRun=4;HaplotypeScore=103.1230;InbreedingCoeff=0.9994;MQ=58.58;MQ0=12;MQRankSum=2.535;QD=25.88;ReadPosRankSum=1.382;VQSLOD=2.3354;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,108,1510	0/0:10,0:10:30.10:0,30,418	0/0:21,0:16:33.07:0,33,427	0/0:19,0:13:28.81:0,29,374	0/0:30,0:30:81.26:0,81,1116	0/0:30,0:30:81.27:0,81,1133	0/0:18,0:18:51.15:0,51,696	0/0:30,0:24:53.85:0,54,741	0/0:25,0:25:75.24:0,75,1033	0/0:23,0:20:57.19:0,57,798	0/0:25,0:24:60.20:0,60,840	1/1:1,17:18:45.14:540,45,0	0/0:26,0:26:78.26:0,78,1091	0/0:21,0:21:63.21:0,63,882	0/0:22,0:21:63.20:0,63,867	0/0:23,0:22:66.22:0,66,922	0/0:23,0:23:60.20:0,60,828	0/0:19,0:19:57.19:0,57,798	0/0:26,0:19:57.18:0,57,772	0/0:33,0:33:96.31:0,96,1327	0/0:26,0:26:78.24:0,78,1061	0/0:37,0:37:96.32:0,96,1343	1/1:2,28:28:69.21:827,69,0	1/1:3,13:16:36.11:432,36,0	0/0:24,0:24:66.22:0,66,924	0/0:31,0:31:90.29:0,90,1232	0/0:37,0:36:99:0,102,1422	0/0:17,0:17:51.17:0,51,714
chr10	34975700	.	TAC	T	13483.60	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=13.903;DP=612;FS=3.358;HRun=0;HaplotypeScore=128.9693;InbreedingCoeff=0.9886;MQ=65.18;MQ0=0;MQRankSum=-3.586;QD=28.51;ReadPosRankSum=4.265;VQSLOD=6.2589;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,30:35:64.26:976,64,0	1/1:0,6:6:15.05:191,15,0	0/0:19,1:20:13.45:0,13,773	0/0:28,0:27:69.18:0,69,1067	0/0:27,0:27:63.19:0,63,1023	1/1:6,21:24:62.69:773,63,0	1/1:1,11:12:30.10:382,30,0	1/1:6,17:22:51.11:617,51,0	0/0:31,0:27:75.26:0,75,1244	1/1:7,25:28:72.21:900,72,0	1/1:1,16:17:48.15:611,48,0	1/1:4,12:14:33.11:420,33,0	1/1:3,16:19:47.64:582,48,0	1/1:2,20:22:44.42:675,44,0	1/1:1,20:21:54.17:687,54,0	1/1:4,14:16:42.13:535,42,0	0/0:33,0:33:93.32:0,93,1540	1/1:4,8:12:21.07:267,21,0	1/1:3,13:15:36.10:441,36,0	1/1:5,21:26:60.19:764,60,0	1/1:0,17:17:42.13:535,42,0	1/1:6,13:16:33.11:420,33,0	1/1:1,19:19:45.59:574,46,0	1/1:4,17:21:45.14:573,45,0	1/1:5,6:11:20.55:238,21,0	1/1:7,34:41:99:1295,105,0	1/1:5,20:22:51.16:649,51,0	1/1:4,12:16:30.10:382,30,0
chr10	34977080	.	C	CT	14671.12	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=13.199;DP=437;FS=3.324;HRun=0;HaplotypeScore=105.6503;InbreedingCoeff=0.9861;MQ=84.22;MQ0=0;MQRankSum=-7.327;QD=42.16;ReadPosRankSum=3.284;VQSLOD=5.0131;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,19:19:51.17:745,51,0	1/1:0,6:6:18.06:270,18,0	0/0:21,0:21:63.17:0,63,842	0/0:11,0:11:23.71:0,24,285	0/0:31,0:31:93.28:0,93,1249	1/1:0,14:14:42.14:621,42,0	1/1:0,11:11:30.10:450,30,0	1/1:0,22:22:66.21:978,66,0	0/0:13,0:13:39.13:0,39,543	1/1:0,24:24:72.23:1060,72,0	1/1:1,25:26:69.06:1023,69,0	1/1:0,14:14:39.13:589,39,0	1/1:0,11:11:33.11:493,33,0	1/1:0,11:11:33.11:497,33,0	1/1:0,14:14:39.13:587,39,0	1/1:0,17:17:45.15:676,45,0	0/0:13,0:13:39.11:0,39,526	1/1:0,5:4:15.05:226,15,0	1/1:0,10:10:30.10:452,30,0	1/1:1,29:30:81.27:1218,81,0	1/1:0,4:4:12.04:179,12,0	1/1:0,11:11:30.10:449,30,0	1/1:0,14:14:36.12:522,36,0	1/1:0,12:12:36.12:538,36,0	1/1:0,10:10:30.10:453,30,0	1/1:0,22:22:66.22:979,66,0	1/1:0,27:27:69.23:1035,69,0	1/1:0,14:14:42.14:631,42,0
chr10	34977656	.	C	CA	441.68	PASS	AB=0.969;AC=34;AF=0.654;AN=52;BaseQRankSum=5.438;DP=300;FS=41.650;HRun=0;HaplotypeScore=59.2602;InbreedingCoeff=0.5041;MQ=28.83;MQ0=86;MQRankSum=-7.206;QD=3.07;ReadPosRankSum=-1.304;VQSLOD=0.3896;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:4:5.94:0,6,41	0/0:8,0:5:4.67:0,5,20	./.	./.	0/0:11,0:10:27.05:0,27,347	1/1:6,0:5:3.01:36,3,0	1/1:5,0:4:0.89:2,1,0	1/1:5,1:4:9.66:64,10,0	0/0:22,0:21:48.09:0,48,617	1/1:5,1:5:4.50:16,4,0	1/1:5,1:4:3.01:34,3,0	0/0:8,0:6:14.78:0,15,97	1/1:7,1:7:7.02:47,7,0	0/1:12,0:11:0.66:1,0,6	1/1:0,3:3:3.01:36,3,0	1/1:9,1:10:7.74:48,8,0	0/0:25,0:25:66.17:0,66,877	1/1:4,0:3:4.56:41,5,0	1/1:11,3:10:4.94:57,5,0	1/1:12,0:8:0.89:2,1,0	1/1:12,1:3:3.01:37,3,0	1/1:4,0:4:7.74:74,8,0	0/0:6,0:5:5.11:0,5,26	0/0:4,0:2:5.94:0,6,41	1/1:10,0:5:1.41:3,1,0	0/1:14,1:11:6.39:81,0,6	1/1:6,0:5:5.01:13,5,0	1/1:4,0:4:4:10,4,0
chr10	34977908	.	G	GC	247.73	PASS	AC=12;AF=0.500;AN=24;BaseQRankSum=3.676;DP=222;FS=2.790;HRun=0;HaplotypeScore=36.7144;InbreedingCoeff=0.6425;MQ=53.58;MQ0=38;MQRankSum=-3.409;QD=24.77;ReadPosRankSum=-0.262;VQSLOD=4.3707;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:37,0:17:36.55:0,37,416	0/0:30,0:15:12.70:0,13,373	0/0:22,0:21:54.18:0,54,755	./.	./.	0/0:7,0:1:3:0,3,26	0/0:28,0:28:63.12:0,63,835	./.	1/1:0,1:1:3.01:45,3,0	./.	./.	./.	./.	./.	0/0:41,0:39:99:0,99,1361	./.	./.	1/1:0,3:3:6.02:91,6,0	./.	1/1:0,2:2:6.02:90,6,0	1/1:1,1:2:3.01:45,3,0	./.	./.	1/1:0,1:1:3.01:44,3,0	1/1:0,1:1:3.01:45,3,0	./.
chr10	34985001	.	A	AT	1925.07	PASS	AB=1.000;AC=40;AF=0.714;AN=56;BaseQRankSum=10.191;DP=242;FS=10.452;HRun=2;HaplotypeScore=67.3256;InbreedingCoeff=0.5307;MQ=53.10;MQ0=3;MQRankSum=-3.236;QD=10.88;ReadPosRankSum=3.505;VQSLOD=0.8803;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,5:4:12.04:162,12,0	0/0:6,0:6:14.98:0,15,159	0/0:15,0:7:21.06:0,21,249	0/0:8,0:5:14.98:0,15,166	0/0:18,0:18:54.17:0,54,669	1/1:12,0:12:14.97:140,15,0	0/1:6,0:6:3.27:53,0,3	0/1:26,0:26:40.27:193,0,40	0/0:4,0:4:12.04:0,12,149	1/1:12,0:12:13.79:138,14,0	0/1:8,0:7:31.59:32,0,50	1/1:10,0:10:11.56:150,12,0	1/1:2,0:2:5.74:38,6,0	1/1:3,0:3:8.55:45,9,0	0/1:3,0:3:10.75:11,0,31	1/1:6,0:6:17.23:94,17,0	0/0:9,0:8:21:0,21,217	1/1:7,0:7:1.69:86,2,0	1/1:6,0:5:10.65:44,11,0	1/1:17,0:16:9.68:196,10,0	1/1:1,0:1:2.98:21,3,0	1/1:5,0:5:14.64:94,15,0	1/1:14,0:13:20.34:172,20,0	1/1:2,0:2:4.15:19,4,0	1/1:8,0:8:19.99:114,20,0	1/1:13,0:13:33.37:162,33,0	1/1:8,0:8:20.10:109,20,0	1/1:3,0:3:8.44:40,8,0
chr10	34985003	.	T	TA	5543.56	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=7.776;DP=249;FS=22.377;HRun=5;HaplotypeScore=62.1777;InbreedingCoeff=0.7718;MQ=55.16;MQ0=2;MQRankSum=-5.597;QD=29.64;ReadPosRankSum=1.647;VQSLOD=3.0451;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,0:6:11.76:82,12,0	0/0:5,0:5:11.64:0,12,71	0/0:16,0:7:21.05:0,21,226	0/0:10,0:6:11.99:0,12,126	0/0:19,0:19:57.13:0,57,604	1/1:2,10:12:33.07:397,33,0	1/1:2,4:6:12.04:150,12,0	1/1:2,24:26:52.60:778,53,0	0/0:4,0:4:12.03:0,12,129	1/1:1,11:12:33.11:415,33,0	1/1:4,4:7:0.03:137,0,0	1/1:3,9:12:30.09:368,30,0	1/1:2,2:4:6.02:75,6,0	1/1:1,3:4:9.03:113,9,0	1/1:2,1:3:1.35:35,1,0	1/1:0,6:6:18.06:222,18,0	0/0:8,0:8:12.03:0,12,129	1/1:1,6:7:18.06:226,18,0	1/1:1,5:5:11.98:150,12,0	1/1:3,14:16:42.13:525,42,0	1/1:0,1:1:3.01:38,3,0	1/1:0,5:5:15.05:187,15,0	1/1:2,12:13:36.12:451,36,0	1/1:0,2:2:5.98:57,6,0	1/1:1,8:9:27.01:308,27,0	1/1:1,13:14:36.12:451,36,0	1/1:1,7:8:21.07:264,21,0	1/1:1,3:4:9.03:114,9,0
chr10	34985052	.	TG	T	5778.39	PASS	AC=44;AF=0.815;AN=54;BaseQRankSum=11.145;DP=310;FS=31.894;HRun=7;HaplotypeScore=107.6538;InbreedingCoeff=0.9202;MQ=76.68;MQ0=0;MQRankSum=-10.645;QD=24.48;ReadPosRankSum=2.534;VQSLOD=3.0087;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,15:15:39.04:366,39,0	1/1:1,7:8:21.03:199,21,0	0/0:16,0:16:5.22:0,5,343	0/0:19,0:18:39.84:0,40,439	0/0:23,0:23:63.19:0,63,776	1/1:3,11:13:36.04:341,36,0	1/1:0,8:8:24.03:227,24,0	1/1:4,9:13:39.07:383,39,0	0/0:8,0:8:21.07:0,21,264	1/1:0,13:13:39.07:378,39,0	1/1:1,8:9:14.98:130,15,0	1/1:0,13:13:39.05:373,39,0	1/1:1,5:6:18.03:174,18,0	1/1:0,9:9:27.03:255,27,0	1/1:0,6:6:18.02:171,18,0	1/1:0,10:10:30.04:284,30,0	0/0:4,0:4:12.04:0,12,151	1/1:0,7:7:21.03:202,21,0	1/1:3,2:5:5.98:59,6,0	1/1:1,13:14:33.04:314,33,0	./.	1/1:0,19:19:48.03:448,48,0	1/1:3,14:17:39.02:362,39,0	1/1:1,4:5:12.02:116,12,0	1/1:0,9:9:27.03:257,27,0	1/1:3,10:13:30.04:285,30,0	1/1:1,9:11:26.47:223,26,0	1/1:3,8:11:24.04:230,24,0
chr10	34985061	.	TA	T	6047.52	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=10.425;DP=321;FS=32.185;HRun=7;HaplotypeScore=109.2057;InbreedingCoeff=0.9428;MQ=74.76;MQ0=0;MQRankSum=-10.255;QD=24.19;ReadPosRankSum=2.053;VQSLOD=2.9729;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,14:14:39.04:367,39,0	1/1:0,7:7:21.03:199,21,0	0/0:16,0:16:20.57:0,21,367	0/0:19,0:18:39.03:0,39,444	0/0:22,0:22:60.19:0,60,747	1/1:2,11:13:36.04:342,36,0	1/1:1,7:8:21.02:198,21,0	1/1:5,13:18:39.02:371,39,0	0/0:9,0:9:24.08:0,24,302	1/1:3,11:14:33.05:318,33,0	1/1:0,10:10:29.86:241,30,0	1/1:1,12:13:36.04:343,36,0	1/1:3,5:8:20.99:190,21,0	1/1:0,9:9:27.03:255,27,0	1/1:1,7:8:18.02:172,18,0	1/1:1,10:11:33.03:309,33,0	0/0:5,0:5:15.04:0,15,176	1/1:0,7:7:21.03:202,21,0	1/1:2,1:2:3:29,3,0	1/1:3,13:16:35.92:316,36,0	1/1:0,6:6:17.89:148,18,0	1/1:1,19:20:54.02:505,54,0	1/1:0,16:16:41.92:363,42,0	1/1:0,5:5:15.02:145,15,0	1/1:2,8:10:23.99:217,24,0	1/1:0,12:12:33.05:321,33,0	1/1:2,11:13:28.86:265,29,0	1/1:0,8:8:24.04:230,24,0
chr10	34986029	.	G	GAGAC	23473.63	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=10.225;DP=611;FS=1.489;HRun=0;HaplotypeScore=113.4020;InbreedingCoeff=0.9912;MQ=61.71;MQ0=0;MQRankSum=-10.322;QD=56.97;ReadPosRankSum=-0.788;VQSLOD=5.9077;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:87.21:0,87,1464	0/0:14,0:14:42.12:0,42,750	0/0:13,0:12:9.38:0,9,357	0/0:9,0:9:22.70:0,23,365	0/0:24,0:24:72.23:0,72,1297	1/1:2,17:19:42.14:1117,42,0	1/1:2,14:16:45.07:1104,45,0	1/1:6,22:29:78.23:1797,78,0	0/0:27,0:27:75.24:0,75,1368	1/1:8,24:33:75.24:1867,75,0	1/1:2,18:21:33.06:867,33,0	0/0:17,0:17:51.12:0,51,829	1/1:0,22:23:57.20:1517,57,0	1/1:4,14:19:42.14:1108,42,0	1/1:1,25:27:54.19:1439,54,0	1/1:6,20:28:60.21:1556,60,0	0/0:30,0:30:78.22:0,78,1389	1/1:0,15:15:33.11:879,33,0	1/1:5,12:17:51.16:1151,51,0	1/1:6,21:27:33.11:877,33,0	1/1:0,22:22:44.83:1199,45,0	1/1:7,23:31:57.20:1491,57,0	0/0:19,0:19:54.17:0,54,976	0/0:17,0:17:48.13:0,48,831	1/1:3,17:20:36.12:959,36,0	1/1:4,29:33:99:2493,99,0	1/1:1,22:23:51.18:1356,51,0	1/1:1,8:9:27.09:697,27,0
chr10	34986205	.	TCA	T	22682.17	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=6.123;DP=696;FS=7.945;HRun=0;HaplotypeScore=89.1347;InbreedingCoeff=0.9950;MQ=69.01;MQ0=7;MQRankSum=-0.963;QD=39.45;ReadPosRankSum=4.603;VQSLOD=6.7752;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,46:47:99:1679,114,0	1/1:0,9:9:24.08:354,24,0	0/0:24,0:20:26.33:0,26,746	0/0:25,0:17:45.69:0,46,705	0/0:29,0:29:87.28:0,87,1584	1/1:0,18:18:51.17:751,51,0	1/1:1,22:23:48.16:707,48,0	1/1:1,30:31:93.31:1365,93,0	0/0:26,0:26:75.26:0,75,1404	1/1:1,33:34:99:1458,99,0	1/1:0,27:27:75.25:1105,75,0	1/1:0,18:18:48.16:707,48,0	1/1:0,21:21:63.21:928,63,0	1/1:0,19:19:48.16:707,48,0	1/1:1,30:30:84.28:1237,84,0	1/1:0,24:23:60.20:883,60,0	0/0:17,0:17:45.15:0,45,841	1/1:0,10:10:24.08:353,24,0	1/1:1,24:25:66.19:945,66,0	1/1:0,29:28:81.27:1189,81,0	1/1:0,41:41:99:1635,111,0	1/1:1,32:32:84.28:1231,84,0	1/1:0,22:22:66.22:972,66,0	1/1:1,28:29:75.25:1105,75,0	1/1:0,20:20:57.19:840,57,0	1/1:0,36:36:99:1543,105,0	1/1:2,20:22:33.21:771,33,0	1/1:0,5:5:15.05:221,15,0
chr10	34987118	.	C	CA	19599.23	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=11.328;DP=633;FS=3.240;HRun=4;HaplotypeScore=99.9590;InbreedingCoeff=0.9755;MQ=71.43;MQ0=0;MQRankSum=-4.667;QD=38.66;ReadPosRankSum=3.496;VQSLOD=3.7277;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,18:22:51.17:734,51,0	1/1:0,10:10:30.10:432,30,0	0/0:30,0:28:78.24:0,78,959	0/0:22,0:21:58.95:0,59,668	0/0:27,0:27:78.21:0,78,939	1/1:1,26:27:75.25:1079,75,0	1/1:0,19:19:54.18:778,54,0	1/1:3,23:26:72.14:948,72,0	0/0:24,0:24:72.23:0,72,891	1/1:2,19:21:60.19:841,60,0	1/1:0,24:24:69.19:970,69,0	1/1:1,18:19:51.17:734,51,0	1/1:2,11:13:33.11:468,33,0	1/1:0,12:12:33.11:475,33,0	1/1:1,21:22:57.19:821,57,0	1/1:4,20:24:26:810,26,0	0/0:23,0:23:68.23:0,68,811	1/1:3,15:18:48.16:687,48,0	1/1:2,21:23:63.13:859,63,0	1/1:1,34:35:99:1397,99,0	1/1:3,34:37:99:1426,99,0	1/1:1,23:24:69.19:960,69,0	1/1:1,29:30:84.28:1210,84,0	1/1:2,14:16:36.12:518,36,0	1/1:0,21:21:63.21:907,63,0	1/1:2,29:31:87.29:1248,87,0	1/1:1,30:31:84.28:1210,84,0	1/1:0,2:2:6.02:86,6,0
chr10	34987984	.	AT	A	967.24	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=4.859;DP=536;FS=2.768;HRun=9;HaplotypeScore=71.1528;InbreedingCoeff=0.9674;MQ=66.54;MQ0=0;MQRankSum=1.550;QD=16.68;ReadPosRankSum=0.753;VQSLOD=3.9376;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:78.20:0,78,880	0/0:15,0:13:39.11:0,39,442	0/0:9,0:9:15.04:0,15,170	0/0:8,0:8:11.11:0,11,120	0/0:38,0:38:99:0,105,1167	0/0:24,0:24:60.17:0,60,683	0/0:7,0:7:21.06:0,21,242	0/0:20,0:20:45.12:0,45,511	0/0:22,0:22:60.16:0,60,681	0/0:25,0:24:57.17:0,57,656	0/0:27,0:22:48.11:0,48,540	1/1:3,18:21:54.02:494,54,0	0/0:13,0:13:30.09:0,30,342	0/0:12,0:12:36.07:0,36,401	0/0:9,0:9:21.05:0,21,233	0/0:14,0:14:39.12:0,39,450	0/0:23,0:23:60.16:0,60,682	0/0:16,0:15:36.11:0,36,415	0/0:22,0:22:48.14:0,48,554	0/0:33,0:25:72.17:0,72,807	0/0:4,0:4:12.04:0,12,138	0/0:18,0:18:48.11:0,48,540	1/1:4,20:18:38.75:357,39,0	1/1:2,10:13:31.08:259,31,0	0/0:24,0:22:66.20:0,66,762	0/0:21,0:21:60.18:0,60,692	0/0:29,1:30:50.77:0,51,838	0/0:16,0:16:48.14:0,48,554
chr10	34990184	.	T	TAAAA	9496.96	PASS	AB=1.000;AC=43;AF=0.768;AN=56;BaseQRankSum=1.046;DP=411;FS=5.973;HRun=10;HaplotypeScore=88.8013;InbreedingCoeff=0.8591;MQ=66.21;MQ0=2;MQRankSum=-5.302;QD=30.34;ReadPosRankSum=-4.175;VQSLOD=2.5666;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:20:29.38:486,29,0	0/0:3,0:3:8.49:0,8,62	0/0:18,0:16:24.86:0,25,311	0/0:16,0:13:3.50:0,3,86	0/0:16,0:16:42.08:0,42,554	1/1:8,4:15:34.67:623,35,0	1/1:2,7:11:27.01:549,27,0	1/1:16,2:18:30.16:526,30,0	0/0:17,0:17:51.16:0,51,704	1/1:12,4:15:22.30:408,22,0	1/1:10,9:22:30.02:556,30,0	1/1:2,0:8:6.02:114,6,0	1/1:7,1:9:9.03:168,9,0	1/1:2,8:12:21.07:450,21,0	1/1:5,3:10:9.03:182,9,0	1/1:1,4:5:8.82:186,9,0	0/0:24,0:25:69.14:0,69,958	1/1:7,6:13:27.04:478,27,0	1/1:18,7:25:38.82:705,39,0	1/1:7,15:26:57.16:1061,57,0	1/1:5,6:11:18.06:390,18,0	1/1:5,7:14:21.07:398,21,0	1/1:9,0:17:18.06:327,18,0	0/1:5,0:5:0:0,0,0	1/1:3,10:15:24.08:519,24,0	1/1:8,8:19:31.90:549,32,0	1/1:3,10:14:24.04:469,24,0	1/1:2,5:7:15.05:353,15,0
chr10	34990288	.	G	GA	6333.80	PASS	AB=0.786;AC=36;AF=0.643;AN=56;BaseQRankSum=-11.349;DP=439;FS=4.298;HRun=9;HaplotypeScore=50.6087;InbreedingCoeff=0.8199;MQ=64.90;MQ0=4;MQRankSum=-0.436;QD=22.70;ReadPosRankSum=-0.194;VQSLOD=5.5501;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:74.70:0,75,650	0/0:13,0:13:29.96:0,30,257	0/1:16,0:10:5.24:5,0,92	0/0:15,0:11:28.84:0,29,235	0/0:13,0:13:38.98:0,39,335	1/1:3,18:21:48.13:531,48,0	1/1:0,6:6:12.03:133,12,0	1/1:5,21:26:66.18:729,66,0	0/0:10,0:10:23.99:0,24,208	1/1:4,10:14:30.04:311,30,0	1/1:4,11:15:27.07:297,27,0	0/0:0,0:7:14.26:0,14,42	1/1:2,9:11:24.06:266,24,0	1/1:0,9:9:15.04:166,15,0	1/1:1,7:8:18.05:199,18,0	0/1:2,6:8:4.45:179,0,4	0/0:37,0:37:77.97:0,78,677	1/1:2,14:16:39.57:425,40,0	1/1:7,18:25:16.02:556,16,0	1/1:8,15:22:51.13:559,51,0	1/1:1,4:6:8.12:127,8,0	1/1:4,9:13:1.49:240,1,0	0/0:0,0:15:30.56:0,31,90	0/0:2,0:16:22.41:0,22,66	1/1:0,19:19:45.12:498,45,0	1/1:2,17:19:48.09:516,48,0	1/1:1,19:19:45.12:498,45,0	1/1:0,3:3:9.02:100,9,0
chr10	34991711	.	TTGGAGG	T	15251.64	PASS	AB=0.947;AC=47;AF=0.839;AN=56;BaseQRankSum=11.119;DP=392;FS=8.813;HRun=0;HaplotypeScore=93.2411;InbreedingCoeff=0.8296;MQ=85.89;MQ0=0;MQRankSum=-12.629;QD=48.88;ReadPosRankSum=0.938;VQSLOD=4.4260;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,12:15:30.10:690,30,0	1/1:1,4:5:12.04:277,12,0	0/0:21,0:21:48.15:0,48,1328	0/0:16,0:16:33.11:0,33,1095	0/0:27,0:27:75.24:0,75,2473	1/1:1,16:17:42.14:968,42,0	1/1:1,15:16:45.12:989,45,0	1/1:5,22:27:66.20:1396,66,0	0/0:16,0:16:39.13:0,39,1290	1/1:2,12:14:39.13:875,39,0	1/1:3,14:17:36.12:824,36,0	1/1:1,17:18:42.14:968,42,0	1/1:1,12:13:33.11:760,33,0	1/1:1,10:11:24.08:553,24,0	1/1:0,12:12:30.10:691,30,0	1/1:1,7:8:18.06:415,18,0	0/1:17,1:18:14.97:15,0,1698	1/1:1,5:6:12.04:277,12,0	1/1:1,9:10:27.07:569,27,0	1/1:0,12:12:21.07:484,21,0	1/1:1,15:16:24.04:504,24,0	1/1:2,10:12:24.08:553,24,0	1/1:0,10:10:24.08:553,24,0	1/1:3,3:6:8.99:158,9,0	1/1:1,6:7:15.05:346,15,0	1/1:1,14:15:42.14:936,42,0	1/1:2,19:20:51.18:1175,51,0	1/1:0,6:6:12.04:277,12,0
chr10	34991849	.	A	AT	19173.52	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=9.589;DP=592;FS=4.729;HRun=1;HaplotypeScore=114.1111;InbreedingCoeff=0.9966;MQ=87.92;MQ0=0;MQRankSum=-6.366;QD=40.11;ReadPosRankSum=2.565;VQSLOD=4.6008;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,30:32:87.29:1302,87,0	1/1:0,7:6:18.06:270,18,0	0/0:22,0:22:65.99:0,66,802	0/0:24,0:24:68.84:0,69,777	0/0:27,0:27:81.26:0,81,1051	1/1:1,20:21:57.16:830,57,0	1/1:0,17:17:45.15:674,45,0	1/1:3,37:40:99:1701,117,0	0/0:17,0:17:48.13:0,48,605	1/1:0,23:24:72.24:1075,72,0	1/1:0,25:24:66.22:989,66,0	1/1:1,25:26:72.24:1079,72,0	1/1:2,17:19:51.17:764,51,0	1/1:1,15:16:36.12:539,36,0	1/1:0,26:26:72.24:1078,72,0	1/1:0,8:8:21.07:315,21,0	0/0:24,0:24:69.22:0,69,896	1/1:0,14:14:36.12:539,36,0	1/1:1,13:14:36.11:519,36,0	1/1:1,23:23:57.19:854,57,0	1/1:1,25:26:69.23:1033,69,0	1/1:1,19:20:54.18:809,54,0	1/1:3,26:29:75.25:1124,75,0	1/1:0,18:18:54.18:809,54,0	1/1:1,17:16:45.15:674,45,0	1/1:0,20:20:60.20:899,60,0	1/1:2,21:23:63.21:936,63,0	1/1:0,11:11:24.08:360,24,0
chr10	34992465	.	A	ATGAGACCCTG	22106.47	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=7.068;DP=404;FS=56.283;HRun=0;HaplotypeScore=167.1852;InbreedingCoeff=0.9059;MQ=76.44;MQ0=0;MQRankSum=-11.841;QD=72.48;ReadPosRankSum=-1.313;VQSLOD=2.6901;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:16,6:22:24.08:1229,24,0	1/1:4,4:8:12.04:529,12,0	0/0:16,0:16:39.05:0,39,902	0/0:22,0:22:26.84:0,27,548	0/0:22,0:22:57.20:0,57,1701	1/1:4,7:11:21.07:1075,21,0	1/1:16,5:21:18.06:920,18,0	1/1:18,1:19:27.09:1128,27,0	0/0:17,0:17:42.13:0,42,1155	1/1:15,10:26:33.11:1678,33,0	1/1:3,3:6:12.04:614,12,0	1/1:5,3:8:18.06:837,18,0	1/1:6,4:10:18.06:871,18,0	1/1:11,6:17:33.11:1354,33,0	1/1:8,7:15:27.09:1301,27,0	1/1:4,6:11:24.08:1144,24,0	0/0:22,0:22:63.19:0,63,1897	1/1:4,0:4:3.01:110,3,0	1/1:12,2:13:9.03:459,9,0	1/1:8,8:17:29.81:1531,30,0	1/1:14,6:20:17.96:854,18,0	1/1:4,5:9:15.05:768,15,0	1/1:3,6:9:18.06:920,18,0	1/1:6,5:12:15.05:765,15,0	1/1:3,11:14:33.11:1688,33,0	1/1:6,5:11:15.05:769,15,0	1/1:7,6:13:21.07:989,21,0	1/1:7,0:7:12.04:573,12,0
chr10	34992551	.	TCC	T	2188.82	PASS	AB=1.000;AC=39;AF=0.722;AN=54;BaseQRankSum=0.390;DP=356;FS=0.000;HRun=3;HaplotypeScore=83.8531;InbreedingCoeff=0.5030;MQ=72.22;MQ0=4;MQRankSum=-1.523;QD=8.32;ReadPosRankSum=1.949;VQSLOD=0.2567;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:6,0:6:0:0,0,0	1/1:6,0:6:14.93:116,15,0	0/0:25,0:16:8.04:0,8,222	0/0:38,0:24:13.90:0,14,395	0/0:8,0:8:11.97:0,12,98	1/1:7,0:7:6.07:70,6,0	1/1:9,0:9:8.89:60,9,0	1/1:13,0:13:10.66:203,11,0	0/0:10,0:9:17.68:0,18,132	0/1:16,0:16:32.50:130,0,33	1/1:17,0:16:13.85:102,14,0	1/1:7,0:7:5.94:44,6,0	1/1:16,0:16:32.77:248,33,0	1/1:16,0:16:11.63:80,12,0	1/1:12,0:12:8.99:76,9,0	1/1:11,0:11:14.33:104,14,0	0/0:9,0:9:22.25:0,22,214	0/1:6,0:5:1.96:56,0,2	1/1:3,8:8:23.92:193,24,0	1/1:21,0:21:15.45:183,15,0	1/1:9,0:9:8.96:69,9,0	1/1:17,0:17:17.05:158,17,0	1/1:10,0:10:2.50:24,2,0	./.	1/1:12,0:12:10.46:97,10,0	0/1:14,0:14:10.01:153,0,10	1/1:19,0:19:14.76:180,15,0	0/1:8,0:8:12.11:16,0,12
chr10	34993397	.	C	CAT	16781.21	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=13.844;DP=519;FS=39.487;HRun=0;HaplotypeScore=289.1086;InbreedingCoeff=0.9750;MQ=61.29;MQ0=0;MQRankSum=-14.021;QD=41.33;ReadPosRankSum=4.211;VQSLOD=1.2015;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,16:22:42.14:782,42,0	1/1:1,11:12:36.12:671,36,0	0/0:14,0:14:24.90:0,25,415	0/0:24,0:22:51.12:0,51,664	0/0:32,0:32:87.27:0,87,1241	1/1:7,17:16:36.12:653,36,0	1/1:1,4:3:9.03:167,9,0	1/1:4,11:14:39.13:728,39,0	0/0:23,1:22:66.18:0,66,945	1/1:2,24:23:66.19:1196,66,0	1/1:3,19:22:60.21:1106,60,0	1/1:4,10:11:30.10:559,30,0	1/1:3,11:14:33.11:615,33,0	1/1:9,14:18:36.12:653,36,0	1/1:8,16:16:39.13:709,39,0	1/1:5,12:13:36.08:635,36,0	0/0:17,1:16:48.16:0,48,707	1/1:3,3:6:15.05:280,15,0	1/1:5,8:9:21.07:392,21,0	1/1:3,21:24:63.22:1155,63,0	1/1:2,4:6:15.05:279,15,0	1/1:7,19:26:69.24:1284,69,0	1/1:5,20:25:69.22:1230,69,0	1/1:4,9:11:21.07:351,21,0	1/1:5,14:18:48.16:876,48,0	1/1:3,20:21:51.17:952,51,0	1/1:5,18:21:63.22:1173,63,0	1/1:3,3:6:18.06:334,18,0
chr10	34993406	.	ATG	A	10645.75	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=12.967;DP=399;FS=63.288;HRun=0;HaplotypeScore=265.8647;InbreedingCoeff=0.9275;MQ=62.86;MQ0=0;MQRankSum=-12.779;QD=35.25;ReadPosRankSum=4.163;VQSLOD=1.4747;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,11:13:27.05:378,27,0	1/1:8,3:11:33.11:483,33,0	0/0:17,0:16:25.59:0,26,525	0/0:15,0:12:10.61:0,11,226	0/0:25,0:25:72.22:0,72,1274	1/1:15,2:11:27.09:395,27,0	1/1:4,0:3:9.03:131,9,0	1/1:2,9:11:33.11:499,33,0	0/0:21,0:20:51.16:0,51,922	1/1:16,8:21:63.21:935,63,0	1/1:16,3:18:51.13:722,51,0	1/1:7,3:7:21.07:310,21,0	1/1:9,2:11:27.09:398,27,0	1/1:9,5:10:30.10:443,30,0	1/1:14,2:9:27.09:392,27,0	1/1:8,4:8:24.08:357,24,0	0/0:17,0:17:48.16:0,48,900	1/1:3,0:3:9.03:132,9,0	1/1:3,5:7:21.07:316,21,0	1/1:13,7:20:57.19:836,57,0	1/1:3,1:4:9.03:133,9,0	1/1:15,4:19:57.19:840,57,0	1/1:17,3:20:60.16:851,60,0	1/1:4,5:7:11.99:151,12,0	1/1:12,2:13:33.11:487,33,0	1/1:14,5:17:45.15:663,45,0	1/1:16,1:15:45.15:662,45,0	1/1:2,1:3:9.03:133,9,0
chr10	34993407	.	TG	T	5953.80	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=12.984;DP=397;FS=64.055;HRun=1;HaplotypeScore=275.5519;InbreedingCoeff=0.9179;MQ=61.46;MQ0=1;MQRankSum=-12.686;QD=19.65;ReadPosRankSum=4.515;VQSLOD=1.0411;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:13,3:13:26.95:222,27,0	1/1:3,8:11:32.91:266,33,0	0/0:15,1:15:8.44:0,8,345	0/0:14,0:11:15.18:0,15,196	0/0:26,0:25:72.17:0,72,993	1/1:2,15:11:26.94:216,27,0	1/1:0,4:3:8.97:71,9,0	1/1:9,2:11:32.96:274,33,0	0/0:19,0:17:51.16:0,51,721	1/1:8,16:21:62.88:522,63,0	1/1:3,16:18:50.88:411,51,0	1/1:4,7:8:20.98:178,21,0	1/1:2,9:11:26.95:218,27,0	1/1:5,9:10:29.95:245,30,0	1/1:2,14:9:26.91:212,27,0	1/1:4,8:8:23.96:197,24,0	0/0:19,0:18:48.16:0,48,702	1/1:0,3:3:8.98:72,9,0	1/1:5,3:7:20.97:174,21,0	1/1:7,13:20:56.87:465,57,0	1/1:1,3:4:8.99:74,9,0	1/1:4,15:19:56.92:472,57,0	1/1:3,17:20:59.88:497,60,0	1/1:6,4:7:11.94:93,12,0	1/1:2,12:13:32.94:271,33,0	1/1:5,14:17:44.91:366,45,0	1/1:1,16:15:44.92:365,45,0	1/1:1,2:3:8.99:74,9,0
chr10	34993412	.	TTAAAAAA	T	11105.86	PASS	AB=0.806;AC=45;AF=0.804;AN=56;BaseQRankSum=13.621;DP=414;FS=44.887;HRun=0;HaplotypeScore=298.6568;InbreedingCoeff=0.6176;MQ=65.28;MQ0=3;MQRankSum=-12.149;QD=33.96;ReadPosRankSum=5.016;VQSLOD=2.9141;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:16,3:16:99:196,0,261	1/1:3,8:11:28.66:463,29,0	0/0:19,0:18:50.65:0,51,998	0/1:15,0:11:14.90:15,0,192	0/0:30,0:28:81.20:0,81,2617	1/1:2,15:11:27.09:563,27,0	0/1:1,4:4:34.08:175,0,34	1/1:9,2:11:26:187,26,0	0/0:18,0:16:48.16:0,48,1717	1/1:8,16:21:56.97:923,57,0	1/1:3,16:18:46.87:890,47,0	1/1:6,7:8:19.79:328,20,0	1/1:2,9:11:25.66:453,26,0	1/1:5,9:10:28.19:461,28,0	1/1:3,14:9:23.91:447,24,0	1/1:4,8:8:21.22:280,21,0	0/0:20,0:19:51.14:0,51,1701	1/1:0,3:3:9.03:188,9,0	1/1:6,3:8:17.12:160,17,0	1/1:7,13:20:51.71:855,52,0	1/1:1,3:4:8.39:133,8,0	1/1:4,15:19:54.35:917,54,0	1/1:4,17:20:55.52:1022,56,0	1/1:7,3:7:8.39:133,8,0	1/1:2,12:13:31.20:524,31,0	1/1:5,14:17:43.09:774,43,0	1/1:1,16:15:44.36:885,44,0	1/1:1,2:3:8.39:133,8,0
chr10	34993436	.	AG	A	11072.91	PASS	AB=0.682;AC=42;AF=0.750;AN=56;BaseQRankSum=11.755;DP=575;FS=2.880;HRun=2;HaplotypeScore=271.4941;InbreedingCoeff=0.4117;MQ=44.02;MQ0=25;MQRankSum=-11.545;QD=23.71;ReadPosRankSum=2.376;VQSLOD=4.2464;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:14,9:13:98.44:293,0,98	1/1:2,13:14:36.12:466,36,0	0/0:19,0:7:17.36:0,17,173	0/1:16,1:6:10.41:13,0,10	0/0:30,0:28:69.22:0,69,998	1/1:1,17:13:36.12:466,36,0	0/1:5,11:12:23.83:212,0,24	0/1:6,16:18:44.77:461,0,45	0/0:25,0:22:60.19:0,60,867	1/1:3,29:29:81.26:1050,81,0	1/1:3,26:24:63.20:813,63,0	1/1:7,7:9:21.07:272,21,0	1/1:1,14:15:33.11:428,33,0	1/1:0,16:11:27.09:350,27,0	1/1:3,26:21:36.12:466,36,0	1/1:2,13:11:24.08:311,24,0	0/0:34,0:29:48.15:0,48,699	1/1:2,4:5:8.99:98,9,0	0/1:4,13:6:29.82:141,0,30	1/1:4,19:18:48.16:622,48,0	0/1:5,4:8:69.81:102,0,70	1/1:2,29:30:78.25:1010,78,0	1/1:4,22:22:63.20:816,63,0	1/1:6,2:5:6.02:78,6,0	1/1:4,17:17:42.14:544,42,0	1/1:2,27:25:69.16:858,69,0	1/1:1,29:28:81.26:1049,81,0	1/1:2,4:5:12.04:156,12,0
chr10	34993949	.	TGC	T	6389.14	PASS	AB=0.529;AC=43;AF=0.796;AN=54;BaseQRankSum=12.807;DP=303;FS=67.576;HRun=0;HaplotypeScore=84.2628;InbreedingCoeff=0.7823;MQ=103.56;MQ0=8;MQRankSum=-11.927;QD=34.72;ReadPosRankSum=2.265;VQSLOD=1.8660;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,5:4:9.03:137,9,0	1/1:0,7:6:18.06:275,18,0	0/0:26,0:26:69.40:0,69,1360	0/0:20,0:20:53.91:0,54,945	0/0:23,0:23:69.24:0,69,1318	1/1:0,14:13:33.11:504,33,0	./.	1/1:1,4:2:3.01:46,3,0	0/0:19,0:19:54.19:0,54,1040	1/1:2,11:13:33.11:498,33,0	1/1:0,9:7:18.06:275,18,0	1/1:0,8:5:15.05:229,15,0	1/1:2,7:9:21.07:321,21,0	1/1:0,8:6:18.06:275,18,0	1/1:0,8:7:21.07:321,21,0	0/1:1,8:8:33.78:297,0,34	0/0:29,0:29:84.23:0,84,1544	1/1:0,4:4:9.03:138,9,0	1/1:0,7:6:18.06:276,18,0	1/1:1,8:6:18.06:275,18,0	1/1:0,8:8:21.07:321,21,0	1/1:0,12:11:27.09:413,27,0	1/1:1,5:5:15.05:228,15,0	1/1:0,3:3:6.02:92,6,0	1/1:1,10:9:24.08:367,24,0	1/1:0,12:9:27.09:413,27,0	1/1:0,13:13:36.12:550,36,0	1/1:0,3:3:9.03:138,9,0
chr10	34994008	.	GTT	G	1406.86	PASS	AC=30;AF=0.750;AN=40;BaseQRankSum=8.863;DP=175;FS=71.947;HRun=3;HaplotypeScore=57.7432;InbreedingCoeff=0.6359;MQ=122.81;MQ0=0;MQRankSum=-8.753;QD=29.31;ReadPosRankSum=2.359;VQSLOD=-0.1157;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	1/1:1,2:2:3.01:46,3,0	0/0:32,0:31:93.28:0,93,1677	0/0:27,0:27:72.21:0,72,1253	0/0:30,0:30:90.31:0,90,1732	./.	./.	./.	0/0:16,0:16:48.09:0,48,852	1/1:0,5:5:15.05:229,15,0	1/1:0,3:2:3.01:46,3,0	1/1:0,3:2:6.02:92,6,0	1/1:2,1:2:3.01:46,3,0	./.	1/1:2,2:4:6.02:91,6,0	./.	0/0:18,0:18:54.10:0,54,936	1/1:0,1:1:3.01:46,3,0	./.	1/1:0,2:1:3.01:46,3,0	1/1:0,1:1:3.01:46,3,0	1/1:1,4:5:12.04:183,12,0	1/1:0,4:4:12.04:183,12,0	./.	1/1:0,2:1:3.01:46,3,0	1/1:0,3:2:6.02:92,6,0	1/1:0,6:5:15.05:229,15,0	1/1:0,3:3:9.03:137,9,0
chr10	34994199	.	GTTAATCACTGT	G	1995.56	PASS	AC=18;AF=0.643;AN=28;BaseQRankSum=8.493;DP=164;FS=4.919;HRun=0;HaplotypeScore=102.8630;InbreedingCoeff=0.8277;MQ=45.30;MQ0=36;MQRankSum=-2.200;QD=35.63;ReadPosRankSum=0.153;VQSLOD=3.0085;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	1/1:2,0:2:5.90:38,6,0	0/0:21,0:15:40.86:0,41,2302	0/0:13,0:8:24.08:0,24,1262	0/0:23,0:23:69.15:0,69,3682	./.	./.	./.	0/0:13,0:13:33.32:0,33,1789	1/1:4,7:8:23.87:540,24,0	1/1:3,7:9:7.26:478,7,0	./.	./.	./.	./.	1/1:1,0:1:2.92:17,3,0	0/0:19,0:19:48.16:0,48,2676	./.	./.	1/1:9,2:9:23.65:272,24,0	./.	1/1:2,2:3:8.84:128,9,0	1/1:2,1:3:8.87:130,9,0	./.	1/1:3,4:6:17.89:413,18,0	1/1:6,1:2:5.98:116,6,0	./.	./.
chr10	34994214	.	AGC	A	622.46	PASS	AC=14;AF=0.583;AN=24;BaseQRankSum=7.379;DP=124;FS=23.458;HRun=0;HaplotypeScore=71.3521;InbreedingCoeff=0.8277;MQ=53.01;MQ0=1;MQRankSum=-2.125;QD=22.23;ReadPosRankSum=2.620;VQSLOD=2.1466;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:20,0:20:60.16:0,60,1155	0/0:16,0:12:36.08:0,36,688	0/0:24,0:23:69.24:0,69,1393	./.	./.	./.	0/0:15,0:15:45.15:0,45,911	1/1:0,9:6:18.05:221,18,0	1/1:0,7:7:18:179,18,0	./.	./.	./.	./.	./.	0/0:21,0:21:63.17:0,63,1233	./.	./.	1/1:0,2:2:5.98:52,6,0	./.	1/1:0,3:2:6.02:82,6,0	1/1:0,2:2:5.98:53,6,0	./.	1/1:0,4:4:12.03:129,12,0	1/1:0,1:1:3.01:33,3,0	./.	./.
chr10	34994368	.	G	GAT	1113.68	PASS	AB=1.000;AC=24;AF=0.571;AN=42;BaseQRankSum=8.115;DP=181;FS=77.002;HRun=0;HaplotypeScore=71.8989;InbreedingCoeff=0.2918;MQ=95.94;MQ0=0;MQRankSum=-8.304;QD=15.05;ReadPosRankSum=2.544;VQSLOD=0.4037;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,7:7:12.04:217,12,0	./.	0/0:16,0:17:45.13:0,45,609	0/0:11,0:11:19.88:0,20,375	0/0:30,0:29:87.28:0,87,1236	0/1:8,0:7:19.85:123,0,20	0/1:5,0:5:24.88:72,0,25	0/1:3,0:3:8.95:47,0,9	0/0:9,0:8:24.08:0,24,353	./.	./.	1/1:1,4:4:5.93:71,6,0	0/1:2,0:2:14.93:23,0,15	0/1:5,0:5:7.93:76,0,8	1/1:4,0:3:9.01:87,9,0	1/1:2,0:2:6.01:56,6,0	0/0:21,0:21:60.19:0,60,865	1/1:3,0:2:6.01:55,6,0	1/1:4,0:2:6.01:56,6,0	1/1:2,0:2:3:29,3,0	./.	./.	./.	1/1:1,3:3:6.02:108,6,0	0/0:7,0:1:2.97:0,3,20	1/1:7,0:5:15.02:144,15,0	0/1:12,0:6:4.93:101,0,5	./.
chr10	34994402	.	C	CTGTTT	2513	PASS	AC=32;AF=0.727;AN=44;BaseQRankSum=8.804;DP=177;FS=21.583;HRun=0;HaplotypeScore=60.5684;InbreedingCoeff=0.7392;MQ=72.91;MQ0=1;MQRankSum=-9.211;QD=33.07;ReadPosRankSum=1.520;VQSLOD=1.7192;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,7:11:24.01:574,24,0	0/0:3,0:3:9.03:0,9,192	0/0:17,0:16:41.79:0,42,822	0/0:13,0:12:30.01:0,30,549	0/0:25,0:25:69.22:0,69,1428	1/1:6,0:5:11.90:131,12,0	1/1:6,0:6:15.02:275,15,0	1/1:5,0:3:9.03:163,9,0	0/0:15,0:15:42.14:0,42,875	./.	./.	1/1:2,1:2:3.01:40,3,0	1/1:1,0:1:3.01:55,3,0	1/1:3,0:3:8.98:133,9,0	1/1:5,0:4:9.03:170,9,0	1/1:4,0:4:11.92:151,12,0	0/0:16,0:16:45.13:0,45,896	1/1:6,0:5:9.03:175,9,0	1/1:6,0:4:9.03:175,9,0	1/1:1,0:1:2.97:20,3,0	1/1:2,0:1:3.01:36,3,0	./.	./.	1/1:2,3:4:9.50:270,10,0	./.	1/1:4,0:4:12.01:194,12,0	1/1:7,0:2:6.02:115,6,0	./.
chr10	34994405	.	T	TTTTG	2628.34	PASS	AB=1.000;AC=29;AF=0.690;AN=42;BaseQRankSum=8.686;DP=186;FS=23.053;HRun=0;HaplotypeScore=57.0754;InbreedingCoeff=0.6690;MQ=71.36;MQ0=4;MQRankSum=-8.874;QD=32.45;ReadPosRankSum=1.570;VQSLOD=1.3424;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:15,0:14:32.74:285,0,33	0/0:3,0:3:9.03:0,9,188	0/0:17,0:15:41.96:0,42,825	0/0:14,0:12:29.13:0,29,541	0/0:26,0:26:69.22:0,69,1406	1/1:5,2:6:11.94:159,12,0	1/1:2,4:6:15.02:334,15,0	1/1:0,5:3:9.03:200,9,0	0/0:15,0:15:42.14:0,42,880	./.	./.	1/1:2,0:2:2.22:7,2,0	1/1:1,1:1:3.01:78,3,0	1/1:3,2:3:9:179,9,0	1/1:1,4:5:9.03:240,9,0	1/1:2,2:4:11.98:202,12,0	0/0:15,0:15:45.13:0,45,896	1/1:1,4:5:9.03:238,9,0	1/1:0,4:5:9.03:237,9,0	./.	1/1:1,1:1:3.01:57,3,0	./.	./.	1/1:5,0:4:10.85:179,11,0	./.	1/1:1,3:3:9.03:236,9,0	1/1:5,2:2:6.02:159,6,0	./.
chr10	34994807	.	T	TC	1342.32	PASS	AB=0.552;AC=21;AF=0.700;AN=30;BaseQRankSum=-4.453;DP=310;FS=11.440;HRun=0;HaplotypeScore=13.3067;InbreedingCoeff=0.5314;MQ=34.17;MQ0=54;MQRankSum=-3.596;QD=11.57;ReadPosRankSum=1.903;VQSLOD=2.4248;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	1/1:1,4:4:3.01:44,3,0	./.	./.	0/0:32,13:41:27.30:0,27,880	./.	./.	1/1:1,13:7:21.07:314,21,0	0/0:19,10:28:36.08:0,36,503	1/1:1,10:9:27.09:405,27,0	1/1:2,8:5:3.01:42,3,0	./.	0/0:1,3:4:2.90:0,3,16	./.	1/1:0,10:9:3.01:45,3,0	./.	0/0:16,8:19:27.06:0,27,357	./.	1/1:2,6:4:9.03:135,9,0	./.	./.	1/1:1,4:3:3.01:45,3,0	0/1:3,13:7:9.63:80,0,10	./.	1/1:1,6:1:3.01:44,3,0	1/1:0,8:3:9.03:135,9,0	1/1:1,21:12:12.04:179,12,0	./.
chr10	34994875	.	A	AC	42.98	PASS	AB=0.545;AC=7;AF=0.389;AN=18;BaseQRankSum=2.560;DP=168;FS=11.787;HRun=0;HaplotypeScore=22.4267;MQ=64.89;MQ0=28;MQRankSum=-2.870;QD=3.31;ReadPosRankSum=-1.060;VQSLOD=1.0094;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	1/1:1,0:1:3.01:36,3,0	0/0:28,0:11:30.10:0,30,398	0/0:14,0:2:5.75:0,6,42	0/0:32,0:32:84.28:0,84,1162	./.	1/1:1,2:2:3.01:48,3,0	1/1:1,2:2:3.01:48,3,0	0/0:22,1:21:63.19:0,63,850	./.	./.	./.	./.	./.	./.	./.	0/0:21,0:21:63.21:0,63,880	./.	./.	./.	./.	./.	./.	./.	./.	./.	0/1:1,5:2:0:0,0,0	./.
chr10	34995121	.	A	AG	155.40	PASS	AB=1.000;AC=15;AF=0.341;AN=44;BaseQRankSum=5.265;DP=282;FS=4.742;HRun=0;HaplotypeScore=45.7309;InbreedingCoeff=0.4568;MQ=41.34;MQ0=23;MQRankSum=-3.903;QD=3.31;ReadPosRankSum=3.462;VQSLOD=2.1656;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:10:5.88:0,6,43	1/1:2,0:1:1.82:5,2,0	0/0:18,0:10:21.06:0,21,279	0/0:25,0:19:51.09:0,51,650	0/0:23,0:22:57.14:0,57,773	0/0:4,1:2:1.41:0,1,13	1/1:4,1:3:4.56:17,5,0	./.	0/0:21,0:22:52.72:0,53,574	0/1:7,0:4:3.71:4,0,8	./.	./.	0/0:10,0:7:0.97:0,1,44	0/0:8,0:3:2.05:0,2,12	1/1:8,0:3:2.84:14,3,0	./.	0/0:37,0:36:73.36:0,73,1065	0/0:2,0:2:2.84:0,3,14	0/0:6,0:3:3.76:0,4,17	1/1:3,3:5:9.78:129,10,0	1/1:5,1:2:4.83:48,5,0	./.	./.	0/0:9,0:5:1.40:0,1,36	1/1:8,1:2:3.01:46,3,0	0/0:4,0:2:2.87:0,3,15	0/0:12,0:5:9.39:0,9,56	1/1:1,0:1:2.99:24,3,0
chr10	34995122	.	AAG	A	1494.63	PASS	AB=0.727;AC=29;AF=0.630;AN=46;BaseQRankSum=6.845;DP=277;FS=4.863;HRun=0;HaplotypeScore=43.8154;InbreedingCoeff=0.1448;MQ=41.16;MQ0=24;MQRankSum=-3.891;QD=8.30;ReadPosRankSum=5.769;VQSLOD=2.4653;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,11:10:18.06:288,18,0	1/1:0,2:1:3.01:48,3,0	0/0:18,0:10:21.04:0,21,280	0/0:24,0:18:45.11:0,45,656	0/0:22,1:22:60.14:0,60,1003	0/1:3,4:3:2.28:88,0,2	1/1:3,2:3:3:48,3,0	./.	0/1:19,7:21:20.86:21,0,357	0/1:2,4:3:12.62:87,0,13	./.	0/0:2,3:3:2.97:0,3,20	1/1:1,7:5:12.04:194,12,0	1/1:0,7:2:6.02:97,6,0	1/1:4,6:3:2.92:17,3,0	./.	0/1:34,4:35:57.72:58,0,1178	1/1:1,1:2:3.01:49,3,0	1/1:4,3:4:6.02:98,6,0	0/1:5,1:5:20.50:106,0,20	0/1:5,3:3:2.30:87,0,2	./.	./.	0/1:3,8:5:38.11:42,0,38	1/1:2,7:2:2.98:22,3,0	1/1:1,3:1:3.01:49,3,0	1/1:0,12:5:15.05:243,15,0	0/0:1,0:1:2.80:0,3,13
chr10	34995177	.	AG	A	281.24	PASS	AB=0.929;AC=21;AF=0.438;AN=48;BaseQRankSum=5.299;DP=223;FS=0.915;HRun=2;HaplotypeScore=50.7751;InbreedingCoeff=0.3538;MQ=28.10;MQ0=51;MQRankSum=-3.933;QD=3.91;ReadPosRankSum=3.500;VQSLOD=0.6191;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,1:2:3:28,3,0	1/1:3,0:2:5.83:33,6,0	./.	./.	0/0:19,0:18:39.13:0,39,566	1/1:6,3:4:1.34:35,1,0	1/1:6,0:4:5.92:43,6,0	./.	0/0:12,0:11:30.10:0,30,430	0/1:3,0:3:2.33:2,0,44	1/1:5,3:4:7.08:40,7,0	0/1:3,1:3:4.80:5,0,17	0/0:6,0:4:7.26:0,7,42	0/1:4,0:2:1.12:6,0,1	0/1:9,2:6:8.37:40,0,8	0/0:4,0:2:2.50:0,2,9	0/0:23,0:23:40.54:0,41,650	0/0:5,0:4:4.41:0,4,15	1/1:7,1:5:2.81:45,3,0	1/1:3,4:6:17.14:120,17,0	0/1:4,0:2:10.14:13,0,10	./.	1/1:3,0:1:2.90:16,3,0	0/0:6,0:1:2.97:0,3,20	0/0:3,0:1:0:0,0,0	0/0:5,0:2:5.31:0,5,26	0/0:11,0:5:11.68:0,12,65	0/0:1,0:1:3.01:0,3,45
chr10	34995179	.	GA	G	121.18	PASS	AB=0.861;AC=12;AF=0.261;AN=46;BaseQRankSum=3.494;DP=222;FS=0.000;HRun=2;HaplotypeScore=52.2993;InbreedingCoeff=0.0735;MQ=28.39;MQ0=52;MQRankSum=-3.809;QD=2.47;ReadPosRankSum=3.553;VQSLOD=-0.7458;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,0:2:2.68:11,3,0	0/0:3,0:2:1.55:0,2,5	./.	./.	0/0:19,0:18:39.13:0,39,565	0/1:8,1:4:14.56:29,0,15	1/1:3,2:4:2.97:10,3,0	./.	0/0:13,0:12:30.10:0,30,439	0/1:2,1:3:22.11:22,0,58	0/0:8,0:4:0.59:0,1,11	0/1:3,1:3:22.30:22,0,29	0/0:7,0:4:8.97:0,9,71	0/1:4,0:2:5.55:9,0,6	0/1:10,1:6:13.38:44,0,13	0/0:4,0:2:2.88:0,3,15	0/0:23,0:23:49.89:0,50,680	0/0:5,0:4:5.24:0,5,31	0/0:8,0:5:2.04:0,2,22	1/1:5,2:6:6.93:85,7,0	0/1:3,1:2:11.82:14,0,12	./.	0/0:2,1:1:0.89:0,1,2	0/0:6,0:1:3.01:0,3,35	./.	0/0:5,0:2:5.93:0,6,41	0/0:11,0:5:14.72:0,15,124	0/0:1,0:1:3.01:0,3,45
chr10	34995187	.	GAAGGAA	G	449.47	PASS	AB=0.912;AC=23;AF=0.548;AN=42;BaseQRankSum=4.833;DP=188;FS=11.167;HRun=0;HaplotypeScore=43.4118;InbreedingCoeff=0.1585;MQ=30.84;MQ0=57;MQRankSum=-5.054;QD=5.42;ReadPosRankSum=2.052;VQSLOD=0.0971;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:2,0:2:3.01:43,3,0	1/1:3,0:2:5.98:50,6,0	./.	./.	0/0:15,0:15:30.10:0,30,629	0/1:6,0:3:6.97:37,0,7	./.	./.	0/1:17,0:17:9.49:9,0,314	0/0:2,0:2:6.01:0,6,88	1/1:6,0:4:11.99:128,12,0	0/0:3,0:2:2.94:0,3,18	0/0:3,0:2:0.47:0,0,1	1/1:0,0:1:2.37:8,2,0	0/1:4,0:4:0.92:60,0,1	1/1:1,0:1:2.99:24,3,0	0/1:14,9:24:40.89:41,0,548	1/1:3,0:2:2.99:24,3,0	./.	0/1:5,0:5:37.49:74,0,37	1/1:4,0:2:2.70:40,3,0	./.	1/1:3,0:1:3.01:32,3,0	0/0:5,0:1:3.01:0,3,39	./.	1/1:3,0:1:1.25:3,1,0	0/0:1,0:1:3.01:0,3,45	0/0:3,0:2:3.01:0,3,48
chr10	34995193	.	A	AAAGG	446.64	PASS	AB=0.960;AC=17;AF=0.472;AN=36;BaseQRankSum=-2.640;DP=202;FS=1.840;HRun=0;HaplotypeScore=48.3336;InbreedingCoeff=0.3508;MQ=31.55;MQ0=53;MQRankSum=1.143;QD=5.65;ReadPosRankSum=-0.894;VQSLOD=1.2660;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:2,0:2:2.88:0,3,15	1/1:3,0:2:1.25:3,1,0	./.	./.	1/1:10,7:18:9.03:201,9,0	0/0:5,0:3:2.88:0,3,15	./.	./.	1/1:7,11:21:8.39:140,8,0	0/0:2,0:2:2.68:0,3,11	0/0:6,0:4:5.06:0,5,16	0/0:3,0:2:2.74:0,3,12	./.	./.	0/0:5,0:4:2.65:0,3,14	1/1:1,0:1:2.74:12,3,0	0/1:23,1:24:24.49:163,0,24	1/1:3,0:2:2.15:7,2,0	./.	0/0:4,0:4:8.69:0,9,48	1/1:3,0:2:0.47:1,0,0	./.	1/1:2,0:1:0.47:1,0,0	0/0:2,0:1:1.25:0,1,3	./.	1/1:2,0:2:5.67:29,6,0	0/0:1,0:1:3:0,3,28	./.
chr10	34995194	.	AAG	A	511.49	PASS	AB=0.646;AC=20;AF=0.476;AN=42;BaseQRankSum=5.426;DP=206;FS=11.853;HRun=0;HaplotypeScore=37.7533;InbreedingCoeff=0.3601;MQ=31.25;MQ0=55;MQRankSum=-4.644;QD=13.82;ReadPosRankSum=2.946;VQSLOD=1.6981;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,1:2:3.01:49,3,0	1/1:1,2:2:6.02:93,6,0	./.	./.	0/0:18,0:18:33.06:0,33,489	0/1:2,3:3:6.37:43,0,6	./.	./.	0/0:21,0:20:5.19:0,5,234	0/0:2,0:2:5.99:0,6,76	1/1:2,2:4:12.03:167,12,0	./.	0/0:3,0:2:2.94:0,3,18	0/0:1,0:1:1.55:0,2,4	1/1:3,2:4:3.39:70,3,0	1/1:1,0:1:2.98:22,3,0	0/0:24,0:24:27.71:0,28,493	1/1:3,0:2:2.98:22,3,0	0/0:4,1:2:0.89:0,1,2	0/1:2,2:4:27.80:86,0,28	1/1:4,0:2:2.98:25,3,0	./.	1/1:1,1:1:3.01:42,3,0	0/0:2,0:1:3.01:0,3,50	./.	1/1:3,0:2:5.18:26,5,0	0/0:1,0:1:3.01:0,3,43	0/0:3,0:2:3.01:0,3,45
chr10	34995228	.	A	AGG	349.63	PASS	AC=24;AF=0.600;AN=40;BaseQRankSum=5.442;DP=206;FS=45.748;HRun=0;HaplotypeScore=40.9222;InbreedingCoeff=0.5603;MQ=36.11;MQ0=25;MQRankSum=-3.557;QD=11.28;ReadPosRankSum=-0.527;VQSLOD=1.3954;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,0:1:2.98:21,3,0	1/1:1,2:2:6.02:108,6,0	0/0:41,0:10:30.10:0,30,480	0/0:53,0:7:15.05:0,15,243	0/0:20,0:18:36.05:0,36,498	1/1:3,0:1:3:25,3,0	./.	1/1:6,0:2:1.25:3,1,0	0/0:21,0:20:26.11:0,26,362	0/0:1,0:1:3.01:0,3,32	1/1:1,1:3:6:84,6,0	./.	./.	./.	1/1:3,0:2:5.79:38,6,0	1/1:1,0:1:3:28,3,0	0/0:26,0:25:39.98:0,40,638	1/1:2,0:2:3:29,3,0	./.	1/1:3,0:2:6:55,6,0	1/1:3,0:1:2.96:19,3,0	./.	1/1:0,1:1:3.01:36,3,0	0/0:1,0:1:3.01:0,3,49	./.	1/1:2,0:2:5.98:46,6,0	0/0:1,0:1:3.01:0,3,49	./.
chr10	34995232	.	A	AGG	128.56	PASS	AB=0.833;AC=10;AF=0.294;AN=34;BaseQRankSum=2.967;DP=192;FS=7.768;HRun=2;HaplotypeScore=37.2457;InbreedingCoeff=0.4058;MQ=36.80;MQ0=23;MQRankSum=-2.450;QD=12.86;ReadPosRankSum=-0.062;VQSLOD=0.1941;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	0/0:3,0:2:1.25:0,1,3	0/0:43,0:11:30.10:0,30,489	0/0:52,0:8:18.03:0,18,258	0/0:19,0:18:39.12:0,39,587	./.	./.	0/0:5,0:2:1.55:0,2,4	0/0:21,0:20:26.88:0,27,402	0/0:1,0:1:3.01:0,3,33	0/0:2,0:2:3.26:0,3,10	./.	./.	./.	1/1:0,1:1:3.01:33,3,0	1/1:0,1:1:3.01:48,3,0	0/0:25,0:24:42.13:0,42,656	1/1:1,1:2:3.01:54,3,0	./.	./.	1/1:3,0:1:3.01:57,3,0	./.	0/1:1,0:1:0:0,0,0	0/0:1,0:1:3.01:0,3,49	./.	0/1:1,1:2:10.09:45,0,10	0/0:1,0:1:3.01:0,3,49	./.
chr10	34995290	.	A	AC	395.37	PASS	AB=0.709;AC=3;AF=0.115;AN=26;BaseQRankSum=-0.844;DP=80;FS=19.910;HRun=0;HaplotypeScore=62.6463;InbreedingCoeff=-0.1059;MQ=42.58;MQ0=6;MQRankSum=-0.844;QD=9.19;ReadPosRankSum=2.224;VQSLOD=1.7364;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:1,0:1:0.47:0,0,1	./.	0/0:6,0:3:5.97:0,6,48	./.	0/1:9,6:11:96.33:96,0,165	./.	./.	0/0:2,0:1:2.04:0,2,6	0/1:7,4:11:99:112,0,207	./.	./.	0/0:1,0:1:2.90:0,3,16	./.	0/0:2,0:2:4.09:0,4,17	0/0:1,0:1:0.89:0,1,2	./.	0/1:9,8:17:99:270,0,107	./.	./.	./.	./.	0/0:2,0:1:3:0,3,25	0/0:3,0:3:8.94:0,9,73	0/0:1,0:1:2.74:0,3,12	./.	./.	./.	0/0:3,0:1:2.94:0,3,18
chr10	34995329	.	GA	G	1112.21	PASS	AB=1.000;AC=39;AF=0.813;AN=48;BaseQRankSum=6.952;DP=163;FS=19.043;HRun=2;HaplotypeScore=88.7971;InbreedingCoeff=0.3709;MQ=41.55;MQ0=13;MQRankSum=-3.379;QD=9.84;ReadPosRankSum=-0.550;VQSLOD=0.1372;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:11,1:12:22.93:122,23,0	1/1:2,1:1:3.01:37,3,0	0/1:17,0:2:0.83:1,0,15	0/0:8,0:4:5.91:0,6,61	0/0:14,0:9:26.55:0,27,185	1/1:2,0:2:5.96:43,6,0	1/1:4,0:4:7.70:61,8,0	1/1:10,0:9:0.76:100,1,0	0/1:13,0:13:38.39:38,0,138	./.	1/1:3,0:3:9.03:109,9,0	1/1:2,0:2:5.21:22,5,0	./.	1/1:3,1:3:8.72:61,9,0	1/1:5,0:4:11.89:83,12,0	1/1:2,1:2:5.98:46,6,0	0/0:23,0:23:29.97:0,30,343	./.	1/1:5,0:4:11.92:87,12,0	1/1:2,0:1:3.01:35,3,0	0/1:3,0:2:0.96:16,0,1	1/1:4,1:3:8.23:67,8,0	1/1:3,0:3:9.03:107,9,0	1/1:4,0:4:4.99:18,5,0	1/1:2,1:1:3.01:36,3,0	./.	1/1:3,1:3:2.98:21,3,0	1/1:4,2:4:12.04:143,12,0
chr10	34995330	.	A	AGGAGG	2839.69	PASS	AB=0.756;AC=27;AF=0.519;AN=52;BaseQRankSum=1.743;DP=180;FS=8.278;HRun=0;HaplotypeScore=101.3955;InbreedingCoeff=0.1043;MQ=40.41;MQ0=13;MQRankSum=-4.282;QD=23.09;ReadPosRankSum=-1.625;VQSLOD=2.4899;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:13:22.64:330,23,0	0/0:3,0:1:2.68:0,3,11	0/0:17,0:2:2:0,2,18	0/0:8,0:4:4.97:0,5,100	0/0:13,0:9:27.08:0,27,536	1/1:2,2:4:8.96:214,9,0	0/1:1,3:4:10.84:282,0,11	0/1:4,6:9:2.01:365,0,2	0/1:8,0:13:99:113,0,357	./.	0/0:3,0:3:7.79:0,8,31	0/1:0,0:2:10.05:28,0,10	0/1:2,0:2:6.17:53,0,6	1/1:3,2:4:3.39:198,3,0	0/1:2,4:5:14.76:377,0,15	1/1:2,1:2:6.02:183,6,0	0/1:23,0:25:10.32:10,0,964	./.	1/1:2,4:5:12.04:396,12,0	0/0:2,1:1:2.22:0,2,7	1/1:1,2:2:3.01:98,3,0	0/1:5,1:4:19.17:75,0,19	0/0:4,0:4:7.65:0,8,30	1/1:1,0:4:5.96:52,6,0	0/0:2,1:1:2.37:0,2,8	1/1:3,4:3:3.01:79,3,0	1/1:1,3:3:3.01:99,3,0	0/1:6,0:4:1.58:42,0,2
chr10	34995382	.	TTCCTATTTC	T	7438.78	PASS	AB=0.861;AC=42;AF=0.840;AN=50;BaseQRankSum=10.758;DP=264;FS=20.171;HRun=0;HaplotypeScore=105.0087;InbreedingCoeff=0.4695;MQ=39.14;MQ0=16;MQRankSum=-9.345;QD=38.74;ReadPosRankSum=2.355;VQSLOD=3.1768;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,7:13:21.03:457,21,0	1/1:0,1:1:3.01:98,3,0	0/0:21,0:7:21.07:0,21,958	0/0:10,0:2:6.02:0,6,298	0/0:28,9:32:69.34:0,69,3999	1/1:0,4:5:15.05:440,15,0	1/1:0,3:4:9.03:244,9,0	1/1:0,4:5:12.04:342,12,0	0/1:13,1:17:99:286,0,1614	1/1:0,7:3:9.03:293,9,0	1/1:0,11:9:21.07:635,21,0	./.	1/1:0,4:5:6.02:176,6,0	./.	1/1:0,2:3:9.03:195,9,0	1/1:0,1:3:9.03:225,9,0	0/1:28,2:30:99:153,0,3554	./.	1/1:0,6:10:27.09:712,27,0	1/1:0,2:2:6.02:195,6,0	1/1:0,0:2:6.02:128,6,0	1/1:0,10:5:9.03:293,9,0	1/1:0,4:4:9.03:293,9,0	1/1:0,3:6:9.03:254,9,0	1/1:0,16:14:24.08:724,24,0	1/1:0,7:6:12.04:387,12,0	1/1:0,7:5:12.04:371,12,0	1/1:0,12:7:18.06:538,18,0
chr10	34995392	.	C	CA	291.07	PASS	AB=0.858;AC=10;AF=0.192;AN=52;BaseQRankSum=2.818;DP=272;FS=1.104;HRun=0;HaplotypeScore=88.7226;InbreedingCoeff=-0.0846;MQ=40.29;MQ0=16;MQRankSum=-4.290;QD=4.34;ReadPosRankSum=-1.204;VQSLOD=3.0390;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:10,2:12:43.14:45,0,43	0/0:1,0:1:2.98:0,3,21	0/0:21,0:7:21.06:0,21,275	0/0:7,0:2:6.02:0,6,84	0/0:39,0:34:90.29:0,90,1228	0/0:6,0:6:17.53:0,18,99	0/0:4,0:4:5.85:0,6,33	0/0:6,0:5:11.71:0,12,83	0/1:14,3:17:95.01:95,0,468	0/0:8,0:4:11.96:0,12,93	0/0:11,0:8:5.51:0,6,89	./.	0/1:5,1:6:10.72:42,0,11	./.	0/0:4,0:3:2.88:0,3,15	0/1:2,1:3:32.46:39,0,32	0/0:39,0:37:57.86:0,58,1266	0/0:1,0:1:3.01:0,3,42	0/1:7,1:7:30.40:30,0,66	0/1:3,0:3:7.29:7,0,16	1/1:1,1:2:3.01:48,3,0	0/0:10,0:5:8.86:0,9,57	0/0:5,0:5:8.91:0,9,62	0/1:4,2:6:6.28:85,0,6	0/0:17,1:14:20.76:0,21,147	0/0:8,0:7:11.76:0,12,80	0/1:9,1:6:32.85:33,0,75	0/0:13,0:7:17.84:0,18,127
chr10	34995760	.	AAAAAT	A	515.13	PASS	AB=0.927;AC=13;AF=0.241;AN=54;BaseQRankSum=3.981;DP=154;FS=2.082;HRun=0;HaplotypeScore=53.7666;InbreedingCoeff=-0.0094;MQ=73.01;MQ0=4;MQRankSum=-3.128;QD=6.96;ReadPosRankSum=-3.229;VQSLOD=1.0241;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:8,0:8:99:100,0,190	0/0:2,0:2:2.97:0,3,20	0/0:4,0:4:12.03:0,12,211	0/0:16,0:13:22.77:0,23,346	0/0:5,0:4:12.04:0,12,377	0/1:6,2:6:32.66:123,0,33	0/0:1,0:1:3.01:0,3,71	0/1:29,0:24:99:175,0,675	0/0:4,0:4:12.04:0,12,358	0/0:2,0:1:3.01:0,3,67	1/1:2,0:1:3:25,3,0	0/0:1,0:1:3.01:0,3,66	./.	0/0:1,0:1:3.01:0,3,66	0/0:1,0:1:3.01:0,3,41	0/0:4,0:4:9:0,9,152	0/0:25,0:25:54.19:0,54,1634	1/1:1,0:1:3.01:42,3,0	0/0:5,0:4:12:0,12,211	0/1:5,0:5:13.45:55,0,13	0/0:4,0:4:12:0,12,211	0/0:1,0:1:3.01:0,3,66	1/1:0,1:1:3.01:34,3,0	0/0:2,0:2:6.01:0,6,84	0/1:3,1:3:13.93:49,0,14	0/1:7,1:8:43.19:43,0,151	0/1:8,0:8:6.75:7,0,109	0/0:1,0:1:3.01:0,3,40
chr10	34995765	.	T	TAATACA	4707.79	PASS	AC=34;AF=0.773;AN=44;BaseQRankSum=2.095;DP=146;FS=1.850;HRun=0;HaplotypeScore=42.3846;InbreedingCoeff=0.5445;MQ=74.40;MQ0=2;MQRankSum=-7.082;QD=58.12;ReadPosRankSum=-0.444;VQSLOD=4.2231;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,7:8:21.07:712,21,0	./.	0/0:4,0:4:9.02:0,9,125	0/0:14,0:12:16.28:0,16,248	0/0:6,0:5:15.05:0,15,326	1/1:2,6:6:15.05:468,15,0	1/1:1,0:1:3.01:49,3,0	1/1:6,21:22:51.17:1599,51,0	0/0:4,0:4:9.03:0,9,209	1/1:3,0:3:3.01:62,3,0	1/1:0,1:1:3.01:105,3,0	1/1:0,1:1:3.01:106,3,0	./.	1/1:0,1:1:3.01:105,3,0	./.	./.	0/0:26,0:26:51.17:0,51,1157	1/1:0,1:1:3.01:79,3,0	1/1:3,3:5:6.02:166,6,0	1/1:0,3:3:9.03:316,9,0	1/1:4,0:4:3.01:49,3,0	1/1:0,1:1:3.01:106,3,0	1/1:2,0:2:3.01:51,3,0	./.	1/1:4,0:2:3.01:72,3,0	1/1:2,4:6:18.06:558,18,0	1/1:3,1:4:3.01:106,3,0	./.
chr10	34995829	.	AGT	A	923.98	PASS	AB=0.800;AC=7;AF=0.184;AN=38;BaseQRankSum=-5.438;DP=123;FS=0.000;HRun=0;HaplotypeScore=63.8854;InbreedingCoeff=0.4927;MQ=62.97;MQ0=0;MQRankSum=5.184;QD=21.49;ReadPosRankSum=3.972;VQSLOD=3.9097;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	0/0:1,0:1:1.25:0,1,3	0/0:4,0:3:6.02:0,6,119	0/1:6,0:6:24.70:25,0,109	1/1:0,10:10:27.09:369,27,0	0/0:9,0:9:13.32:0,13,51	0/0:1,0:1:1.25:0,1,3	0/0:14,0:14:33.14:0,33,216	1/1:1,3:4:10.28:125,10,0	0/0:4,0:4:6.63:0,7,21	0/0:7,0:7:4.05:0,4,10	./.	./.	./.	./.	./.	1/1:0,21:21:39.13:528,39,0	0/0:1,0:1:1.55:0,2,4	0/0:6,0:5:5.95:0,6,46	0/0:10,0:10:8.40:0,8,21	./.	0/0:1,0:1:1.55:0,2,4	0/0:3,0:3:4.36:0,4,11	./.	0/0:6,0:5:7.73:0,8,20	0/0:6,0:6:12.20:0,12,47	0/0:3,0:3:4.17:0,4,20	./.
chr10	34995836	.	ATATATAT	A	3534.15	PASS	AC=26;AF=0.722;AN=36;BaseQRankSum=-0.346;DP=127;FS=3.009;HRun=0;HaplotypeScore=65.6369;InbreedingCoeff=0.7022;MQ=61.53;MQ0=1;MQRankSum=-6.491;QD=50.49;ReadPosRankSum=-1.913;VQSLOD=3.1128;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	1/1:0,1:1:3.01:81,3,0	0/0:4,0:3:6.91:0,7,205	0/0:9,0:6:11.13:0,11,206	0/0:11,0:11:30.10:0,30,626	1/1:2,6:8:18.06:484,18,0	1/1:0,2:2:3.01:81,3,0	1/1:1,18:17:39.05:628,39,0	0/0:5,0:5:15.05:0,15,340	1/1:0,4:4:9.03:242,9,0	1/1:1,6:7:9.03:242,9,0	./.	./.	./.	./.	./.	0/0:19,0:19:42.14:0,42,819	1/1:0,1:1:3.01:81,3,0	./.	1/1:2,8:10:18.06:484,18,0	./.	1/1:0,1:1:3.01:81,3,0	1/1:0,3:3:9.03:242,9,0	./.	1/1:0,6:5:15.05:404,15,0	1/1:0,5:5:15.05:404,15,0	1/1:1,2:3:3.01:81,3,0	./.
chr10	34996040	.	CT	C	4506.41	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=10.245;DP=285;FS=39.449;HRun=3;HaplotypeScore=80.7273;InbreedingCoeff=0.8308;MQ=89.56;MQ0=0;MQRankSum=-10.390;QD=22.76;ReadPosRankSum=-1.871;VQSLOD=2.1044;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,17:22:24.07:292,24,0	1/1:3,4:5:9.03:111,9,0	0/0:16,0:16:48.13:0,48,665	0/0:16,0:16:45.15:0,45,647	0/0:14,0:14:39.09:0,39,506	1/1:0,6:6:18.06:223,18,0	1/1:1,10:11:27.08:332,27,0	1/1:2,12:14:30.09:371,30,0	0/0:19,0:19:54.18:0,54,778	1/1:0,7:7:21.07:259,21,0	1/1:5,6:10:12.04:149,12,0	1/1:1,7:8:21.07:260,21,0	1/1:0,5:5:15.05:186,15,0	1/1:1,8:9:24.07:292,24,0	1/1:2,3:5:9.03:111,9,0	1/1:0,5:5:15.05:181,15,0	0/0:22,0:22:66.20:0,66,930	1/1:0,2:2:3.01:37,3,0	1/1:0,9:9:24.08:297,24,0	1/1:5,7:10:9.03:111,9,0	1/1:2,8:10:12.04:149,12,0	1/1:4,5:9:12.04:149,12,0	1/1:5,4:8:6.02:74,6,0	1/1:0,3:3:9.03:111,9,0	1/1:5,5:10:15.04:183,15,0	1/1:6,5:10:12.04:149,12,0	1/1:0,11:11:33.10:408,33,0	1/1:0,2:2:6.02:72,6,0
chr10	34996080	.	TA	T	4543.92	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=9.591;DP=309;FS=86.073;HRun=8;HaplotypeScore=89.4110;InbreedingCoeff=0.8944;MQ=58.93;MQ0=0;MQRankSum=-10.129;QD=20.20;ReadPosRankSum=-0.081;VQSLOD=-0.4789;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,18:20:39.05:370,39,0	1/1:0,3:3:9.01:86,9,0	0/0:11,0:4:9.02:0,9,93	0/0:11,0:8:21.03:0,21,218	0/0:16,0:16:42.05:0,42,476	1/1:1,11:12:32.95:299,33,0	1/1:0,10:10:27.04:260,27,0	1/1:1,12:13:33.05:318,33,0	0/0:20,0:20:60.18:0,60,724	1/1:1,9:10:21.03:200,21,0	1/1:1,7:8:17.98:164,18,0	1/1:2,9:11:27.03:255,27,0	1/1:1,5:6:15.02:144,15,0	1/1:2,8:10:21.03:202,21,0	1/1:1,5:6:18.02:169,18,0	1/1:1,11:12:30.01:281,30,0	0/0:26,0:26:72.13:0,72,815	1/1:1,5:6:14.96:129,15,0	1/1:4,7:11:14.90:135,15,0	1/1:1,14:15:35.95:322,36,0	1/1:1,10:11:20.90:182,21,0	1/1:0,5:5:9.01:87,9,0	1/1:0,9:9:23.99:222,24,0	1/1:0,5:5:8.60:86,9,0	1/1:1,4:5:15.02:141,15,0	1/1:1,7:8:12.01:116,12,0	1/1:2,18:20:33.05:318,33,0	1/1:0,2:2:6.01:58,6,0
chr10	34996138	.	GT	G	7395.60	PASS	AC=44;AF=0.815;AN=54;BaseQRankSum=12.773;DP=414;FS=29.831;HRun=3;HaplotypeScore=121.6512;InbreedingCoeff=0.9698;MQ=68.70;MQ0=1;MQRankSum=-9.008;QD=22.62;ReadPosRankSum=3.381;VQSLOD=3.0666;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,22:24:57.14:611,57,0	1/1:0,4:4:12.03:128,12,0	0/0:10,0:10:26.45:0,26,350	0/0:13,0:13:36.06:0,36,439	0/0:18,0:18:48.15:0,48,674	1/1:0,18:18:51.13:546,51,0	1/1:3,15:18:36.09:386,36,0	1/1:8,17:24:33.49:354,33,0	0/0:19,0:19:57.16:0,57,783	1/1:1,10:11:21.05:225,21,0	1/1:2,16:18:36.09:386,36,0	1/1:0,9:9:18.04:193,18,0	1/1:0,12:12:30.07:322,30,0	1/1:2,9:11:21.05:225,21,0	1/1:1,13:14:36.09:386,36,0	1/1:2,9:11:24.06:257,24,0	0/0:25,0:25:75.24:0,75,1061	1/1:1,8:9:24.06:257,24,0	1/1:1,12:13:27.07:290,27,0	1/1:2,22:24:51.12:546,51,0	1/1:2,14:16:39.10:419,39,0	1/1:1,14:15:24.06:257,24,0	1/1:3,16:19:33.08:354,33,0	1/1:0,9:9:15.04:161,15,0	1/1:0,6:6:9.02:96,9,0	1/1:1,17:18:48.12:514,48,0	1/1:2,21:23:45.11:482,45,0	./.
chr10	34997175	.	CATTG	C	986.60	PASS	AB=0.798;AC=18;AF=0.375;AN=48;BaseQRankSum=1.163;DP=311;FS=68.432;HRun=0;HaplotypeScore=42.4677;InbreedingCoeff=0.1750;MQ=33.28;MQ0=97;MQRankSum=-5.214;QD=8.36;ReadPosRankSum=0.666;VQSLOD=-0.1898;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:11,1:6:6.02:0,6,173	./.	./.	./.	0/0:37,0:37:93.31:0,93,2621	0/1:12,4:8:46.96:50,0,47	1/1:9,5:5:9.03:185,9,0	0/1:10,3:6:99:124,0,230	0/0:18,0:18:48.16:0,48,1388	0/1:12,2:9:35.54:36,0,546	0/0:8,0:5:6.02:0,6,173	1/1:2,5:2:6.02:123,6,0	0/1:4,4:5:68.58:111,0,69	0/0:5,1:3:3.01:0,3,38	0/1:5,3:6:70.32:173,0,70	0/1:17,2:11:37.70:38,0,390	0/0:28,0:26:63.18:0,63,1656	1/1:1,1:1:3.01:62,3,0	1/1:4,1:2:2.68:62,3,0	0/0:7,0:4:8.85:0,9,198	1/1:4,1:3:3.01:62,3,0	0/0:4,1:3:5.93:0,6,103	0/0:9,1:4:6.02:0,6,91	1/1:4,3:6:6.02:114,6,0	0/0:5,0:4:8.92:0,9,122	0/0:5,0:1:3:0,3,27	0/0:10,4:9:8.96:0,9,172	./.
chr10	34997225	.	C	CA	533.88	PASS	AC=22;AF=0.647;AN=34;BaseQRankSum=5.701;DP=171;FS=25.009;HRun=2;HaplotypeScore=30.2791;InbreedingCoeff=0.5740;MQ=55.11;MQ0=20;MQRankSum=-4.781;QD=17.80;ReadPosRankSum=-0.734;VQSLOD=1.7959;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:21,0:10:5.97:0,6,307	0/0:13,0:10:30.08:0,30,350	0/0:33,0:33:90.28:0,90,1116	./.	1/1:0,2:2:6.02:86,6,0	0/0:1,0:1:0.47:0,0,1	0/0:20,0:20:60.18:0,60,730	./.	./.	1/1:3,1:1:3.01:43,3,0	./.	1/1:0,2:1:3.01:43,3,0	./.	1/1:2,0:2:2.98:21,3,0	0/0:18,0:18:45.14:0,45,558	1/1:1,3:4:9.03:129,9,0	./.	1/1:1,1:1:2.97:20,3,0	1/1:0,1:1:3.01:43,3,0	1/1:0,4:1:3.01:43,3,0	./.	1/1:1,2:3:8.99:106,9,0	./.	1/1:0,3:2:3.01:43,3,0	1/1:1,2:2:6.02:86,6,0	./.
chr10	34997275	.	AT	A	1624.02	PASS	AC=6;AF=0.111;AN=54;BaseQRankSum=-8.223;DP=352;FS=2.146;HRun=1;HaplotypeScore=49.0150;InbreedingCoeff=0.8354;MQ=39.34;MQ0=77;MQRankSum=7.975;QD=29.00;ReadPosRankSum=2.032;VQSLOD=3.4989;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:3:8.98:0,9,102	./.	0/0:7,0:3:8.76:0,9,95	0/0:7,0:5:12.04:0,12,167	1/1:2,20:20:57.19:781,57,0	0/0:17,0:10:21.57:0,22,202	0/0:8,0:8:24.08:0,24,327	0/0:35,0:32:93.31:0,93,1295	1/1:0,13:13:33.11:457,33,0	0/0:17,0:11:23.27:0,23,245	0/0:24,0:14:33.11:0,33,456	0/0:7,0:5:8.39:0,8,91	0/0:10,0:7:17.55:0,18,216	0/0:10,0:5:14.30:0,14,148	0/0:7,0:5:14.54:0,15,174	0/0:11,0:8:16.20:0,16,100	1/1:1,20:18:39.13:527,39,0	0/0:10,0:9:23.71:0,24,282	0/0:12,0:8:21.07:0,21,293	0/0:21,0:13:39.13:0,39,541	0/0:8,0:6:9.03:0,9,125	0/0:13,0:7:12.80:0,13,52	0/0:11,0:6:11.57:0,12,112	0/0:9,0:8:21.07:0,21,291	0/0:13,0:8:20.66:0,21,255	0/0:15,0:5:11.57:0,12,112	0/0:9,0:5:10.47:0,10,68	0/0:5,0:4:12.04:0,12,167
chr10	34997765	.	TTAACTC	T	1737.88	PASS	AB=0.807;AC=17;AF=0.340;AN=50;BaseQRankSum=3.106;DP=391;FS=24.097;HRun=0;HaplotypeScore=41.8556;InbreedingCoeff=0.0023;MQ=22.33;MQ0=182;MQRankSum=-2.963;QD=9.76;ReadPosRankSum=0.598;VQSLOD=0.2862;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:13,6:13:61.69:62,0,328	./.	./.	./.	0/0:30,0:27:26.67:0,27,872	0/1:10,2:8:99:129,0,570	0/0:6,1:3:6.02:0,6,219	0/0:16,0:5:15.02:0,15,472	0/0:24,0:16:9:0,9,338	0/1:4,10:9:99:233,0,427	1/1:7,4:3:3.01:77,3,0	0/0:9,0:3:3.01:0,3,86	0/0:12,0:7:15.05:0,15,552	0/0:6,0:2:6.02:0,6,218	0/1:14,1:12:55.60:56,0,600	0/1:17,1:9:55.84:56,0,470	0/0:16,0:6:6.02:0,6,173	0/0:8,1:5:6.02:0,6,220	0/0:12,0:4:12.04:0,12,451	1/1:12,3:3:6.02:153,6,0	0/0:10,0:3:3.01:0,3,113	1/1:5,11:7:18.06:460,18,0	1/1:5,8:5:9.03:230,9,0	0/0:11,1:2:6.02:0,6,225	0/1:4,5:3:97.53:144,0,98	0/1:14,4:10:86.61:87,0,830	0/1:10,2:11:99:138,0,322	0/1:5,1:3:67.75:68,0,217
chr10	34997788	.	TGATA	T	1733.48	PASS	AB=0.868;AC=20;AF=0.435;AN=46;BaseQRankSum=8.922;DP=437;FS=23.119;HRun=0;HaplotypeScore=61.4752;InbreedingCoeff=0.1357;MQ=28.79;MQ0=153;MQRankSum=-0.587;QD=7.22;ReadPosRankSum=0.443;VQSLOD=-0.0135;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:17,4:17:99:163,0,120	./.	./.	./.	1/1:28,0:24:5.99:49,6,0	0/0:19,0:15:30.10:0,30,690	0/1:11,1:8:27.17:27,0,300	./.	0/1:19,0:13:9.44:9,0,193	0/1:17,5:16:99:196,0,250	1/1:6,3:5:3.01:45,3,0	0/0:14,0:9:15.05:0,15,345	0/0:13,0:11:21.07:0,21,483	0/1:10,2:7:99:121,0,123	0/1:15,2:14:60.65:61,0,390	0/0:22,0:12:18.06:0,18,414	1/1:14,3:10:8.99:110,9,0	1/1:7,3:6:6.02:90,6,0	0/0:11,0:5:3.01:0,3,69	0/0:14,0:5:6.02:0,6,138	0/0:6,0:5:6.02:0,6,138	0/0:19,0:10:15.05:0,15,330	1/1:7,8:11:18.05:254,18,0	0/1:6,2:3:39.21:39,0,63	1/1:6,13:12:33.11:498,33,0	0/1:20,6:19:99:229,0,509	./.	0/0:5,3:3:6.02:0,6,134
chr10	35000738	.	A	AT	11144.55	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=12.311;DP=452;FS=34.393;HRun=4;HaplotypeScore=112.2423;InbreedingCoeff=0.9713;MQ=78.19;MQ0=0;MQRankSum=-14.329;QD=33.27;ReadPosRankSum=-1.124;VQSLOD=2.0716;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,16:18:39.13:531,39,0	1/1:1,14:15:42.14:574,42,0	0/0:13,0:13:36.05:0,36,379	0/0:21,0:21:53.14:0,53,557	0/0:34,0:34:99:0,99,1113	1/1:3,15:18:51.16:675,51,0	1/1:3,11:14:33.07:429,33,0	1/1:4,25:29:69.18:894,69,0	0/0:20,0:20:60.12:0,60,651	1/1:5,24:29:69.03:933,69,0	1/1:2,15:17:45.15:607,45,0	1/1:0,5:5:15.05:205,15,0	1/1:2,7:10:30.01:366,30,0	1/1:1,13:14:39.13:532,39,0	1/1:2,11:13:36.11:478,36,0	1/1:3,9:12:30.09:395,30,0	0/0:29,0:29:81.21:0,81,919	1/1:1,4:5:12.04:164,12,0	1/1:2,10:12:30.10:409,30,0	1/1:4,10:13:33.07:429,33,0	1/1:4,13:17:33.11:449,33,0	1/1:1,17:18:48.12:631,48,0	1/1:4,8:12:27.09:368,27,0	1/1:5,5:9:9.03:123,9,0	1/1:1,9:10:27.09:368,27,0	1/1:2,12:14:36.12:488,36,0	1/1:3,21:24:66.22:891,66,0	1/1:0,5:5:15.05:205,15,0
chr10	35000751	.	TA	T	9974.71	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=12.459;DP=458;FS=32.163;HRun=2;HaplotypeScore=107.6393;InbreedingCoeff=0.9833;MQ=81.57;MQ0=0;MQRankSum=-13.370;QD=30.50;ReadPosRankSum=-0.664;VQSLOD=2.4988;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,16:16:45.15:583,45,0	1/1:4,9:13:33.05:382,33,0	0/0:15,0:15:42.11:0,42,556	0/0:23,0:23:50.82:0,51,675	0/0:38,0:38:99:0,114,1658	1/1:1,18:19:45.10:563,45,0	1/1:0,10:10:30.10:389,30,0	1/1:7,19:26:54.11:646,54,0	0/0:24,0:24:72.22:0,72,1041	1/1:2,19:21:54:699,54,0	1/1:0,16:16:39.13:505,39,0	1/1:1,5:6:14.99:161,15,0	1/1:1,9:10:30.10:388,30,0	1/1:1,13:14:30.05:369,30,0	1/1:2,13:15:39.11:491,39,0	1/1:0,12:12:33.11:423,33,0	0/0:31,0:31:92.79:0,93,1333	1/1:0,8:8:21.03:253,21,0	1/1:1,13:14:36.12:466,36,0	1/1:3,12:15:27.04:330,27,0	1/1:0,15:15:30.10:389,30,0	1/1:1,17:18:39.13:505,39,0	1/1:1,14:15:30.05:370,30,0	1/1:0,10:10:12.04:155,12,0	1/1:1,8:9:27.08:337,27,0	1/1:0,15:15:45.08:561,45,0	1/1:3,22:25:63.20:815,63,0	1/1:0,5:5:15.05:194,15,0
chr10	35000881	.	G	GAACTGGAT	21387.50	PASS	AC=44;AF=0.815;AN=54;BaseQRankSum=-1.298;DP=454;FS=1.387;HRun=0;HaplotypeScore=122.0846;InbreedingCoeff=0.9034;MQ=93.35;MQ0=0;MQRankSum=-14.083;QD=67.47;ReadPosRankSum=-1.047;VQSLOD=4.8939;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,0:10:15.05:552,15,0	1/1:12,0:12:27.09:920,27,0	0/0:33,0:33:84.24:0,84,2058	0/0:23,0:23:48.04:0,48,1075	0/0:31,0:31:84.29:0,84,2238	1/1:3,13:16:21.07:903,21,0	1/1:5,3:8:17.96:453,18,0	1/1:10,17:26:48.09:1643,48,0	0/0:23,0:23:63.19:0,63,1583	1/1:9,21:31:72.25:2839,72,0	1/1:12,11:23:38.94:1449,39,0	1/1:12,0:12:24.08:732,24,0	1/1:2,7:10:8.89:386,9,0	1/1:10,4:14:27.03:824,27,0	1/1:9,4:13:32.92:843,33,0	1/1:7,5:12:24.03:728,24,0	0/0:23,0:22:60.19:0,60,1532	1/1:3,0:3:5.94:43,6,0	1/1:16,3:19:39.03:1049,39,0	1/1:14,15:29:75.02:2373,75,0	1/1:6,0:6:6.02:258,6,0	1/1:15,9:24:50.79:1282,51,0	1/1:8,0:8:15.05:481,15,0	./.	1/1:4,2:6:9.03:296,9,0	1/1:3,12:16:45.11:1661,45,0	1/1:2,12:14:30.10:1286,30,0	1/1:0,4:4:9.03:387,9,0
chr10	35000882	.	A	AACTGGATG	18414.42	PASS	AB=1.000;AC=39;AF=0.750;AN=52;BaseQRankSum=2.861;DP=451;FS=7.988;HRun=0;HaplotypeScore=136.5101;InbreedingCoeff=0.6049;MQ=93.48;MQ0=0;MQRankSum=-13.530;QD=59.02;ReadPosRankSum=1.953;VQSLOD=4.4709;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,5:9:15.05:641,15,0	1/1:4,8:12:30.10:1196,30,0	0/0:33,0:33:78.27:0,78,2019	0/0:23,0:23:45.15:0,45,1051	0/0:31,0:31:84.25:0,84,2146	1/1:14,0:14:3.10:748,3,0	0/1:8,0:8:7.96:315,0,8	1/1:25,0:24:41.59:1309,42,0	0/0:22,0:22:60.21:0,60,1547	1/1:30,0:30:72.19:2348,72,0	0/1:23,0:23:17.82:1173,0,18	1/1:7,6:13:27.09:993,27,0	1/1:9,0:9:8.89:332,9,0	1/1:14,0:14:3.06:628,3,0	1/1:12,0:12:21.07:627,21,0	1/1:12,0:12:18.03:576,18,0	0/0:23,0:22:60.16:0,60,1484	./.	0/1:19,0:19:9.08:749,0,9	1/1:29,0:29:37.21:1856,37,0	1/1:6,0:6:6.02:218,6,0	1/1:25,0:25:27.09:948,27,0	1/1:7,5:12:21.07:782,21,0	./.	1/1:5,0:5:8.99:240,9,0	1/1:17,0:17:22.17:1338,22,0	1/1:14,0:14:13.13:1073,13,0	1/1:4,0:4:9.03:325,9,0
chr10	35000953	.	C	CAAT	16368.92	PASS	AB=0.958;AC=47;AF=0.839;AN=56;BaseQRankSum=14.324;DP=395;FS=11.073;HRun=0;HaplotypeScore=124.3552;InbreedingCoeff=0.8452;MQ=77.39;MQ0=0;MQRankSum=-14.755;QD=57.64;ReadPosRankSum=-1.663;VQSLOD=5.5647;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,2:3:9.03:185,9,0	1/1:0,9:9:27.09:662,27,0	0/0:29,0:27:74.28:0,74,1284	0/0:25,0:25:66.83:0,67,1163	0/0:28,0:28:81.25:0,81,1438	1/1:4,8:11:30.10:630,30,0	1/1:1,8:9:26.94:550,27,0	1/1:5,18:23:63.22:1545,63,0	0/0:29,0:29:87.30:0,87,1610	1/1:2,15:17:48.16:1179,48,0	1/1:1,17:18:48.16:1174,48,0	1/1:2,8:10:27.09:660,27,0	1/1:3,3:6:12.04:259,12,0	1/1:1,10:11:30.10:701,30,0	1/1:2,5:7:21:424,21,0	1/1:0,10:10:30.10:736,30,0	0/1:22,1:23:4.33:4,0,1159	1/1:1,2:3:6.02:147,6,0	1/1:1,10:10:27.09:663,27,0	1/1:3,20:22:66.23:1545,66,0	1/1:0,5:5:11.96:237,12,0	1/1:2,15:17:48.16:1140,48,0	1/1:5,18:23:57.19:1287,57,0	1/1:0,4:5:12.04:294,12,0	1/1:3,10:13:35.95:769,36,0	1/1:1,9:10:27.08:615,27,0	1/1:2,7:9:26.96:551,27,0	1/1:1,6:7:20.99:409,21,0
chr10	35001109	.	A	ATATGAC	16230.13	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-7.293;DP=321;FS=76.198;HRun=0;HaplotypeScore=59.3707;InbreedingCoeff=0.8954;MQ=61.38;MQ0=4;MQRankSum=-12.190;QD=72.78;ReadPosRankSum=1.955;VQSLOD=2.3934;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,10:14:33.11:1160,33,0	1/1:1,2:4:2.31:104,2,0	0/0:15,0:14:39.13:0,39,865	0/0:14,0:14:30.07:0,30,549	0/0:31,0:31:78.25:0,78,1740	1/1:1,12:15:30.10:1055,30,0	1/1:4,6:10:15.05:527,15,0	1/1:9,8:12:14.99:339,15,0	0/0:26,0:26:78.13:0,78,1746	1/1:4,8:13:36.11:1188,36,0	1/1:4,5:9:15.05:524,15,0	1/1:0,4:4:12.04:422,12,0	1/1:4,4:8:21.07:735,21,0	1/1:6,3:9:15.05:525,15,0	1/1:3,10:13:33.11:1160,33,0	1/1:4,6:10:21.07:739,21,0	0/0:12,0:12:36.12:0,36,839	1/1:0,4:4:12.04:423,12,0	1/1:4,5:7:21.07:725,21,0	1/1:4,5:9:18.06:633,18,0	1/1:5,6:11:24.08:844,24,0	1/1:2,4:6:15.05:526,15,0	1/1:3,7:10:24.08:843,24,0	1/1:4,3:7:12.04:422,12,0	1/1:1,4:5:12.04:422,12,0	1/1:2,15:17:45.15:1542,45,0	1/1:2,10:12:30.10:1055,30,0	1/1:0,4:4:9.03:317,9,0
chr10	35001549	.	G	GA	3914	PASS	AB=0.545;AC=43;AF=0.796;AN=54;BaseQRankSum=8.155;DP=220;FS=0.000;HRun=1;HaplotypeScore=60.1226;InbreedingCoeff=0.7417;MQ=83.03;MQ0=1;MQRankSum=-8.847;QD=28.99;ReadPosRankSum=2.735;VQSLOD=3.3688;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:7:8.23:36,8,0	1/1:0,0:2:5.60:26,6,0	0/0:22,0:16:44.72:0,45,590	0/0:22,0:18:39.34:0,39,465	0/0:9,0:9:27.09:0,27,367	1/1:0,6:6:18.06:223,18,0	1/1:0,4:4:12.04:146,12,0	1/1:3,20:23:57.15:682,57,0	0/0:10,0:10:30.10:0,30,417	1/1:0,7:7:21.07:261,21,0	1/1:1,2:3:9.01:96,9,0	1/1:2,0:7:9.46:56,9,0	1/1:0,6:6:18.05:216,18,0	0/1:1,5:6:3.55:167,0,4	1/1:0,6:6:18.06:222,18,0	1/1:0,6:6:18.01:208,18,0	0/0:22,0:22:63.21:0,63,864	1/1:0,4:4:9.03:110,9,0	1/1:1,6:7:18.06:224,18,0	1/1:0,4:4:12.04:149,12,0	./.	1/1:0,3:3:8.97:94,9,0	1/1:2,0:4:7.09:34,7,0	1/1:0,0:1:2.68:11,3,0	1/1:0,3:3:6.02:73,6,0	1/1:0,10:10:30.09:375,30,0	1/1:1,11:12:31.99:399,32,0	1/1:1,3:4:9.03:107,9,0
chr10	35001601	.	T	TC	7765.08	PASS	AB=1.000;AC=43;AF=0.827;AN=52;BaseQRankSum=2.359;DP=255;FS=2.853;HRun=0;HaplotypeScore=54.0396;InbreedingCoeff=0.7114;MQ=76.55;MQ0=0;MQRankSum=-4.018;QD=39.62;ReadPosRankSum=1.768;VQSLOD=5.3643;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,15:15:33.11:527,33,0	1/1:0,3:3:3.01:48,3,0	0/1:11,0:11:19.27:19,0,239	0/0:13,0:10:8.35:0,8,99	0/0:14,0:14:42.14:0,42,588	1/1:0,12:12:36.12:574,36,0	1/1:0,4:4:9.03:144,9,0	1/1:2,29:31:87.30:1381,87,0	0/0:8,0:8:24.08:0,24,336	1/1:1,10:11:30.10:459,30,0	1/1:0,7:7:21.07:335,21,0	1/1:0,4:4:9.03:144,9,0	1/1:0,3:3:9.03:144,9,0	./.	1/1:0,10:10:27.09:431,27,0	1/1:0,3:3:9.03:144,9,0	0/0:21,0:21:63.21:0,63,880	1/1:0,6:6:15.05:240,15,0	1/1:3,11:14:42.01:634,42,0	1/1:0,6:6:15.05:239,15,0	1/1:0,2:2:6.02:96,6,0	1/1:0,3:3:9.03:143,9,0	1/1:0,4:4:12.04:191,12,0	./.	1/1:1,6:7:20.81:299,21,0	1/1:0,15:15:42.14:661,42,0	1/1:1,14:15:30.10:479,30,0	1/1:1,9:10:27.09:431,27,0
chr10	35001695	.	TG	T	4970.68	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=7.978;DP=242;FS=0.690;HRun=5;HaplotypeScore=45.1758;InbreedingCoeff=0.7375;MQ=83.30;MQ0=1;MQRankSum=-3.190;QD=27.31;ReadPosRankSum=0.587;VQSLOD=4.3449;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,11:13:36.10:408,36,0	1/1:0,4:4:3.01:34,3,0	0/0:13,0:10:18.49:0,18,215	0/0:17,0:9:18.06:0,18,246	0/0:11,0:11:30.10:0,30,410	1/1:0,11:11:33.09:374,33,0	1/1:0,7:7:21.06:238,21,0	1/1:4,22:26:66.16:728,66,0	0/0:3,0:3:9.03:0,9,123	1/1:2,8:10:24.07:272,24,0	1/1:1,7:8:6.01:68,6,0	1/1:0,3:3:6.02:68,6,0	1/1:0,11:11:33.09:374,33,0	1/1:0,4:4:12.03:136,12,0	1/1:0,6:6:15.04:170,15,0	1/1:0,3:3:6.02:68,6,0	0/0:16,0:16:48.15:0,48,640	1/1:0,2:2:6.02:68,6,0	1/1:1,10:11:30.09:340,30,0	1/1:0,15:15:27.08:306,27,0	1/1:0,1:1:3.01:34,3,0	1/1:0,2:2:3.01:34,3,0	1/1:0,5:5:12.03:136,12,0	1/1:0,2:2:3.01:34,3,0	1/1:0,6:6:12.03:136,12,0	1/1:4,7:11:27.07:297,27,0	1/1:0,13:13:36.10:408,36,0	1/1:1,7:8:21.06:238,21,0
chr10	35002014	.	GACAAAC	G	193.52	PASS	AB=1.000;AC=10;AF=0.192;AN=52;BaseQRankSum=5.231;DP=493;FS=10.940;HRun=0;HaplotypeScore=185.8257;InbreedingCoeff=0.3857;MQ=65.47;MQ0=6;MQRankSum=2.000;QD=2.42;ReadPosRankSum=0.187;VQSLOD=1.8265;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,16:22:6.24:189,6,0	./.	0/0:28,0:19:47.12:0,47,1490	0/0:49,0:42:99:0,119,3143	0/0:13,0:13:21.06:0,21,316	0/0:17,0:17:12.82:0,13,401	0/0:26,0:25:13.44:0,13,350	0/0:34,0:33:22.93:0,23,493	0/1:18,0:18:47.98:48,0,423	0/0:15,0:13:5.77:0,6,404	1/1:8,0:8:0.47:1,0,0	1/1:5,4:8:6.12:62,6,0	0/0:16,0:16:0.84:0,1,48	0/0:21,0:21:12.19:0,12,384	0/0:21,0:21:22.68:0,23,364	0/0:21,0:21:11.76:0,12,398	0/0:21,0:21:43.18:0,43,1014	0/0:11,0:11:23.08:0,23,379	0/0:18,0:18:0.67:0,1,422	0/0:10,0:10:11.57:0,12,207	0/0:37,0:37:5.13:0,5,222	0/0:9,0:9:5.55:0,6,62	./.	1/1:7,3:9:1.35:4,1,0	0/0:12,0:12:10.64:0,11,129	0/1:13,0:13:2.99:3,0,89	0/0:19,0:19:23.57:0,24,432	0/0:9,0:9:6.51:0,7,118
chr10	35002018	.	AACAGACAGACAG	A	1176.66	PASS	AB=1.000;AC=7;AF=0.146;AN=48;BaseQRankSum=-4.310;DP=485;FS=0.945;HRun=0;HaplotypeScore=215.6029;InbreedingCoeff=0.7028;MQ=63.43;MQ0=8;MQRankSum=-0.144;QD=21.01;ReadPosRankSum=3.993;VQSLOD=2.2666;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:7.26:0,7,43	./.	0/0:30,0:19:31.28:0,31,465	0/0:48,0:40:66.04:0,66,1057	./.	0/0:15,0:15:20.66:0,21,691	0/0:23,0:22:18.06:0,18,424	0/0:33,0:32:69.20:0,69,978	1/1:7,10:17:18.06:565,18,0	0/0:15,0:13:27.05:0,27,768	0/1:9,0:9:0:1,0,0	1/1:9,0:8:3.01:64,3,0	0/0:16,0:16:9.01:0,9,107	0/0:20,0:20:23.93:0,24,678	0/0:22,0:22:23.75:0,24,628	0/0:19,0:19:17.95:0,18,682	1/1:21,0:21:39.13:672,39,0	0/0:11,0:11:27.02:0,27,643	0/0:17,0:17:30.10:0,30,848	0/0:10,0:10:8.80:0,9,319	0/0:38,0:38:11.93:0,12,304	0/0:9,0:9:2.78:0,3,50	./.	./.	0/0:12,0:12:5.80:0,6,193	0/0:12,0:12:9.03:0,9,194	0/0:19,0:19:24.08:0,24,644	0/0:9,0:9:9.03:0,9,133
chr10	35002048	.	CACAG	C	1566.79	PASS	AB=0.968;AC=25;AF=0.463;AN=54;BaseQRankSum=2.910;DP=428;FS=3.520;HRun=0;HaplotypeScore=158.3641;InbreedingCoeff=0.0636;MQ=39.13;MQ0=28;MQRankSum=-5.384;QD=6.53;ReadPosRankSum=-0.629;VQSLOD=2.7739;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:27:14.35:84,14,0	1/1:3,0:3:3.01:38,3,0	0/0:35,0:16:9.26:0,9,585	0/0:38,0:20:51.59:0,52,686	0/0:13,0:13:6.02:0,6,89	0/1:15,0:15:12.31:12,0,68	0/1:18,0:17:19.92:79,0,20	0/1:26,0:25:22.08:384,0,22	0/0:17,0:17:26.88:0,27,336	0/1:17,0:15:32.44:212,0,32	1/1:11,1:12:0.47:1,0,0	1/1:7,0:6:6.01:64,6,0	1/1:11,0:11:3.01:38,3,0	0/1:17,1:18:54.52:69,0,55	0/1:16,2:19:16.15:37,0,16	0/0:15,0:15:9.28:0,9,47	0/0:23,0:23:47.95:0,48,928	0/1:7,0:7:20.12:37,0,20	0/1:8,1:8:16.20:163,0,16	0/0:8,0:7:4.37:0,4,16	0/0:31,0:31:6.04:0,6,21	1/1:8,0:8:0.47:1,0,0	./.	0/1:12,0:11:0.02:0,0,0	0/1:8,1:9:0.21:55,0,0	1/1:13,0:13:30.01:366,30,0	0/1:9,0:9:37.64:83,0,38	0/0:2,0:2:2.68:0,3,11
chr10	35002058	.	G	GC	71.02	PASS	AB=0.913;AC=4;AF=0.074;AN=54;BaseQRankSum=3.071;DP=449;FS=7.623;HRun=0;HaplotypeScore=161.5414;InbreedingCoeff=0.3669;MQ=41.15;MQ0=28;MQRankSum=-0.942;QD=1.29;ReadPosRankSum=-0.179;VQSLOD=1.6057;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:10,14:26:13.41:145,0,13	0/0:4,0:4:6.02:0,6,84	0/0:32,0:14:36.12:0,36,502	0/0:39,0:21:50:0,50,643	0/0:14,0:13:18.06:0,18,248	0/0:16,0:16:18.06:0,18,251	0/0:15,0:15:15.05:0,15,209	0/0:23,0:22:54.32:0,54,557	0/0:18,0:18:36.12:0,36,494	0/0:20,0:18:45.15:0,45,627	0/1:12,0:12:0.03:0,0,0	0/0:8,0:8:9.02:0,9,110	0/0:13,0:13:9.03:0,9,121	0/0:17,0:17:15.05:0,15,205	0/0:18,0:18:15.04:0,15,192	0/0:19,0:19:24.04:0,24,299	0/0:23,0:23:48.25:0,48,670	0/0:8,0:8:18.02:0,18,228	0/0:12,0:11:30.09:0,30,401	0/0:14,0:13:24.08:0,24,336	0/0:30,0:30:9:0,9,125	0/1:7,0:7:0.03:0,0,0	0/0:8,0:7:9.01:0,9,108	0/1:10,0:10:0:0,0,0	0/0:14,0:14:15.05:0,15,206	0/0:17,0:17:45.14:0,45,613	0/0:11,0:11:21.07:0,21,292	./.
chr10	35002079	.	ACAGG	A	7976.69	PASS	AB=0.554;AC=44;AF=0.786;AN=56;BaseQRankSum=8.040;DP=432;FS=37.982;HRun=0;HaplotypeScore=131.8745;InbreedingCoeff=0.7616;MQ=69.81;MQ0=2;MQRankSum=-7.663;QD=25.48;ReadPosRankSum=2.480;VQSLOD=2.6911;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,10:14:3.36:58,3,0	1/1:0,6:6:12.04:228,12,0	0/0:25,0:21:54.19:0,54,1388	0/0:35,0:30:84.27:0,84,2027	0/0:18,0:17:42.14:0,42,1099	1/1:0,18:18:30.10:569,30,0	1/1:3,14:17:18.06:341,18,0	1/1:0,16:16:42.13:720,42,0	0/0:21,0:21:48.15:0,48,1046	1/1:3,19:21:57.20:1072,57,0	1/1:1,10:11:3.48:58,3,0	1/1:1,8:8:12.04:213,12,0	1/1:0,9:10:9.03:170,9,0	1/1:0,13:13:9.03:171,9,0	1/1:1,17:18:18.06:341,18,0	1/1:3,18:21:29.89:505,30,0	0/0:20,0:20:42.14:0,42,1134	1/1:2,5:7:12.04:227,12,0	1/1:2,9:11:24.08:430,24,0	1/1:2,14:15:21.07:399,21,0	0/1:4,16:21:0.15:0,0,0	1/1:0,9:9:0.47:1,0,0	1/1:0,9:9:8.69:170,9,0	0/1:2,8:9:0.10:0,0,0	1/1:1,17:18:33.11:626,33,0	1/1:1,21:22:63.22:1180,63,0	1/1:5,9:14:24.08:455,24,0	1/1:1,0:1:3.01:43,3,0
chr10	35002167	.	GA	G	5826.94	PASS	AB=1.000;AC=47;AF=0.839;AN=56;BaseQRankSum=9.252;DP=360;FS=11.061;HRun=7;HaplotypeScore=64.8766;InbreedingCoeff=0.7627;MQ=73.27;MQ0=1;MQRankSum=-6.237;QD=20.52;ReadPosRankSum=0.662;VQSLOD=3.6509;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,22:24:57.12:578,57,0	1/1:0,4:4:11.98:110,12,0	0/0:19,0:15:9.75:0,10,211	0/1:12,0:11:4.82:5,0,32	0/0:24,0:24:60.16:0,60,738	1/1:3,3:6:6.01:61,6,0	1/1:2,11:13:21.04:213,21,0	1/1:5,9:14:27.06:275,27,0	0/0:12,0:12:36.12:0,36,453	1/1:1,19:20:60.09:599,60,0	1/1:1,12:13:30.06:305,30,0	1/1:1,2:3:3.01:30,3,0	1/1:2,10:12:15.03:151,15,0	1/1:1,7:8:20.98:200,21,0	1/1:1,11:12:24.05:244,24,0	1/1:2,6:8:18.04:182,18,0	0/0:21,0:21:60.19:0,60,755	1/1:0,3:3:6.01:61,6,0	1/1:3,10:12:24.04:239,24,0	1/1:4,19:23:48.09:487,48,0	1/1:4,4:8:12.03:122,12,0	1/1:1,10:11:24.04:243,24,0	1/1:4,9:13:27.06:274,27,0	1/1:1,6:7:18.04:183,18,0	1/1:4,14:18:42.01:413,42,0	1/1:4,16:20:42.09:427,42,0	1/1:1,15:16:36.08:365,36,0	1/1:0,2:2:6.01:61,6,0
chr10	35002176	.	AT	A	4669.07	PASS	AB=1.000;AC=47;AF=0.839;AN=56;BaseQRankSum=8.809;DP=319;FS=12.740;HRun=8;HaplotypeScore=65.7885;InbreedingCoeff=0.7103;MQ=60.64;MQ0=1;MQRankSum=-7.317;QD=19.14;ReadPosRankSum=0.294;VQSLOD=3.5731;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,17:24:50.97:467,51,0	1/1:1,3:4:8.96:77,9,0	0/0:15,0:10:18.81:0,19,191	0/1:4,0:3:12.25:13,0,12	0/0:24,0:24:57.15:0,57,665	1/1:1,4:5:9.01:86,9,0	1/1:3,7:10:17.99:165,18,0	1/1:7,1:8:5.98:52,6,0	0/0:13,0:13:33.09:0,33,387	1/1:4,16:20:48.07:462,48,0	1/1:2,10:12:26.98:245,27,0	1/1:0,2:2:3:29,3,0	1/1:1,10:11:15.02:143,15,0	1/1:3,4:7:15.01:140,15,0	1/1:2,9:11:17.97:164,18,0	1/1:1,6:7:14.99:135,15,0	0/0:23,0:23:66.17:0,66,773	1/1:1,2:3:3:29,3,0	1/1:6,8:13:17.98:164,18,0	1/1:2,19:21:51.07:486,51,0	1/1:2,2:3:8.98:79,9,0	1/1:0,12:12:36.06:346,36,0	1/1:4,6:10:24.01:221,24,0	1/1:1,5:6:17.87:149,18,0	1/1:3,12:15:33:308,33,0	1/1:2,14:16:39.06:375,39,0	1/1:4,11:15:30.02:279,30,0	1/1:1,1:2:6.01:57,6,0
chr10	35003840	.	CCCTAAGAGAACACAA	C	3767.72	PASS	AB=0.840;AC=21;AF=0.700;AN=30;BaseQRankSum=5.897;DP=1938;DS;FS=0.000;HRun=0;HaplotypeScore=63.8592;InbreedingCoeff=-0.0586;MQ=5.46;MQ0=1854;MQRankSum=-0.865;QD=11.05;ReadPosRankSum=1.455;VQSLOD=0.7325;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:20,3:2:6.02:279,6,0	./.	./.	./.	./.	0/1:24,6:11:99:528,0,1128	0/1:6,1:2:99:134,0,223	1/1:0,3:3:9.03:226,9,0	0/1:19,5:13:99:383,0,1701	./.	./.	0/1:5,4:4:99:134,0,104	1/1:6,4:3:3.01:140,3,0	1/1:9,8:4:9.03:419,9,0	1/1:15,3:4:6.02:279,6,0	1/1:7,3:3:9.03:419,9,0	0/0:13,0:2:6.02:0,6,377	0/0:10,0:1:2.97:0,3,20	./.	./.	./.	./.	./.	1/1:5,3:3:3.01:140,3,0	./.	1/1:103,5:3:9.03:419,9,0	0/1:72,2:3:99:270,0,220	./.
chr10	35009760	.	TG	T	83.81	PASS	AC=4;AF=0.40;AN=10;BaseQRankSum=2.068;DP=77;FS=0.000;HRun=1;HaplotypeScore=16.1733;MQ=19.09;MQ0=47;MQRankSum=-0.933;QD=16.76;ReadPosRankSum=-0.284;VQSLOD=3.2937;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	0/0:7,0:6:18.06:0,18,284	./.	./.	./.	0/0:9,0:7:21.07:0,21,333	./.	./.	1/1:1,2:2:6.02:84,6,0	./.	./.	./.	./.	0/0:13,0:7:18.02:0,18,258	./.	./.	./.	./.	./.	1/1:0,2:2:6.02:82,6,0	./.	./.	./.	./.	./.
chr10	35009824	.	TA	T	400.66	PASS	AB=0.733;AC=5;AF=0.313;AN=16;BaseQRankSum=-1.944;DP=88;FS=13.414;HRun=13;HaplotypeScore=26.7574;MQ=70.84;MQ0=23;MQRankSum=0.700;QD=9.54;ReadPosRankSum=1.789;VQSLOD=0.7825;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:3:1.25:0,1,3	./.	0/0:10,0:4:3:0,3,27	0/0:4,0:3:1.25:0,1,3	1/1:5,13:17:12.56:255,13,0	./.	./.	./.	1/1:5,8:13:23.81:175,24,0	./.	./.	0/0:3,0:3:0:0,0,0	./.	./.	./.	./.	0/1:7,4:8:36.21:51,0,36	./.	./.	./.	./.	./.	0/0:2,0:2:0:0,0,0	./.	./.	./.	./.	./.
chr10	35011130	.	AAAAG	A	17616.37	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=8.761;DP=553;FS=2.744;HRun=0;HaplotypeScore=117.2323;InbreedingCoeff=0.9409;MQ=74.53;MQ0=4;MQRankSum=-5.098;QD=39.77;ReadPosRankSum=3.855;VQSLOD=5.3799;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,25:27:42.14:743,42,0	1/1:2,10:12:23.87:392,24,0	0/0:26,0:21:38.42:0,38,861	0/0:29,0:20:40.53:0,41,747	0/0:19,0:18:45.15:0,45,1151	1/1:5,27:32:72.24:1256,72,0	1/1:0,5:5:12.04:216,12,0	1/1:4,26:30:78.26:1297,78,0	0/0:24,0:24:69.24:0,69,1751	1/1:3,28:31:81.25:1393,81,0	1/1:0,26:25:72.24:1248,72,0	1/1:1,14:15:36.12:628,36,0	1/1:0,9:9:15.05:270,15,0	1/1:2,16:18:33.11:593,33,0	1/1:1,17:18:42.14:755,42,0	1/1:2,11:13:29.92:539,30,0	0/0:12,0:12:30.10:0,30,737	1/1:1,23:24:57.20:1024,57,0	1/1:2,12:13:36.12:610,36,0	1/1:5,27:32:75.21:1250,75,0	1/1:0,7:7:12.04:197,12,0	1/1:0,8:8:24.08:412,24,0	1/1:2,14:16:27.08:485,27,0	1/1:1,5:6:2.86:54,3,0	1/1:4,17:21:42.14:755,42,0	1/1:2,31:33:93.28:1560,93,0	1/1:0,35:35:81.28:1456,81,0	1/1:0,11:11:27.09:485,27,0
chr10	35011470	.	TA	T	15141.18	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=9.533;DP=594;FS=1.353;HRun=4;HaplotypeScore=101.5233;InbreedingCoeff=0.9992;MQ=68.44;MQ0=3;MQRankSum=-8.846;QD=31.88;ReadPosRankSum=5.077;VQSLOD=4.6995;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,21:23:57.16:672,57,0	1/1:1,16:17:42.13:504,42,0	0/0:25,0:21:34.42:0,34,665	0/0:29,0:25:53.38:0,53,668	0/0:21,0:21:60.19:0,60,821	1/1:1,21:22:57.17:683,57,0	1/1:0,12:12:36.11:432,36,0	1/1:2,31:33:93.23:1087,93,0	0/0:33,0:33:84.24:0,84,1126	1/1:0,27:27:81.24:960,81,0	1/1:1,21:22:48.15:576,48,0	1/1:2,15:16:42.13:503,42,0	1/1:3,10:13:24.07:288,24,0	1/1:2,10:12:36.09:414,36,0	1/1:1,20:21:60.18:719,60,0	1/1:1,18:19:54.17:647,54,0	0/0:11,0:11:30.09:0,30,403	1/1:0,14:14:42.13:504,42,0	1/1:0,20:20:57.17:684,57,0	1/1:2,29:31:75.23:898,75,0	1/1:0,17:17:51.16:612,51,0	1/1:0,23:23:66.20:790,66,0	1/1:0,22:22:57.17:683,57,0	1/1:1,13:14:36.11:432,36,0	1/1:0,27:27:72.22:863,72,0	1/1:3,26:29:81.23:959,81,0	1/1:3,23:26:66.14:763,66,0	1/1:1,13:14:39.12:468,39,0
chr10	35011549	.	C	CCTT	18012.07	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=9.477;DP=497;FS=19.175;HRun=0;HaplotypeScore=98.9820;InbreedingCoeff=0.9094;MQ=41.87;MQ0=5;MQRankSum=-10.466;QD=48.55;ReadPosRankSum=-2.408;VQSLOD=4.4349;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,9:10:27.02:559,27,0	1/1:1,3:4:12.04:259,12,0	0/0:16,0:6:11.22:0,11,213	0/0:22,0:9:19.03:0,19,288	0/0:29,0:29:60.19:0,60,996	1/1:4,20:23:60.21:1353,60,0	1/1:2,6:8:15.05:338,15,0	1/1:6,18:24:57.19:1255,57,0	0/0:32,0:32:78.18:0,78,1241	1/1:8,8:16:33.07:678,33,0	1/1:2,15:17:45.15:986,45,0	1/1:5,9:14:33.11:711,33,0	1/1:5,18:23:39.13:880,39,0	1/1:1,28:28:51.17:1148,51,0	1/1:4,19:23:48.16:1077,48,0	1/1:3,19:21:48.16:1044,48,0	0/0:27,0:26:57.18:0,57,919	1/1:2,8:9:21.07:422,21,0	1/1:8,12:19:36.04:655,36,0	1/1:4,15:19:42.14:925,42,0	1/1:2,0:2:3.01:45,3,0	1/1:4,16:20:54.18:1174,54,0	1/1:1,18:19:54.12:1135,54,0	1/1:0,2:2:6.02:135,6,0	1/1:2,8:9:24.08:486,24,0	1/1:3,22:24:69.24:1538,69,0	1/1:2,21:22:45.15:1017,45,0	1/1:6,1:7:12.04:189,12,0
chr10	35012247	.	TTGA	T	6334.62	PASS	AC=40;AF=0.800;AN=50;BaseQRankSum=-3.497;DP=359;FS=32.726;HRun=0;HaplotypeScore=102.0670;InbreedingCoeff=0.7448;MQ=65.04;MQ0=1;MQRankSum=1.444;QD=22.15;ReadPosRankSum=4.981;VQSLOD=3.0554;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	1/1:9,0:9:8.98:93,9,0	0/0:17,0:15:1.89:0,2,461	0/0:11,0:10:24.08:0,24,473	0/0:21,0:19:33.05:0,33,672	1/1:11,2:13:21.47:218,21,0	1/1:10,3:13:12.35:240,12,0	1/1:6,16:21:45.15:695,45,0	0/0:14,0:14:24.08:0,24,469	1/1:13,5:18:32.12:379,32,0	1/1:3,13:16:2.91:72,3,0	./.	1/1:12,1:13:19.69:297,20,0	1/1:9,2:11:3.41:115,3,0	1/1:2,13:15:30.10:453,30,0	1/1:9,1:10:18.78:210,19,0	0/0:10,0:9:12.04:0,12,222	1/1:12,2:14:23.40:338,23,0	1/1:16,5:20:50.54:601,51,0	1/1:18,2:20:20.64:339,21,0	1/1:13,1:14:26.57:299,27,0	1/1:7,0:7:4.79:59,5,0	1/1:1,0:1:2.94:18,3,0	./.	1/1:18,5:23:42.58:587,43,0	1/1:22,3:25:66.54:787,67,0	1/1:18,2:20:45.43:519,45,0	1/1:1,0:1:2.92:17,3,0
chr10	35012255	.	GA	G	2465.96	PASS	AB=0.911;AC=35;AF=0.700;AN=50;BaseQRankSum=3.744;DP=379;FS=14.073;HRun=1;HaplotypeScore=113.7219;InbreedingCoeff=0.4364;MQ=57.85;MQ0=4;MQRankSum=-0.684;QD=8.06;ReadPosRankSum=3.783;VQSLOD=-0.2862;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	1/1:1,0:8:1.63:17,2,0	0/0:15,0:12:36.06:0,36,500	0/0:10,0:9:27.09:0,27,417	0/0:19,0:17:33.11:0,33,527	1/1:11,1:12:27.46:169,27,0	1/1:11,4:15:18.50:80,19,0	0/1:21,0:19:40.11:40,0,105	0/0:17,0:17:24.08:0,24,376	0/1:15,5:20:59.77:125,0,60	1/1:15,1:16:8.29:59,8,0	./.	1/1:10,3:13:27.96:149,28,0	1/1:7,3:10:15.32:95,15,0	0/1:14,0:15:4.71:32,0,5	0/1:12,1:13:51.27:120,0,51	0/0:12,0:11:15:0,15,205	1/1:10,2:12:13.82:53,14,0	0/1:21,3:21:25.69:234,0,26	1/1:15,6:20:40.25:185,40,0	1/1:14,1:15:32.23:185,32,0	1/1:6,4:9:14.99:114,15,0	1/1:1,0:1:3:27,3,0	./.	1/1:23,4:27:12.18:238,12,0	1/1:25,4:27:60.47:408,60,0	1/1:21,2:21:42.80:286,43,0	1/1:1,0:1:3:26,3,0
chr10	35012256	.	ATG	A	1743.40	PASS	AB=0.971;AC=35;AF=0.700;AN=50;BaseQRankSum=1.508;DP=377;FS=19.279;HRun=0;HaplotypeScore=122.1707;InbreedingCoeff=0.2240;MQ=57.79;MQ0=4;MQRankSum=3.324;QD=5.52;ReadPosRankSum=4.895;VQSLOD=1.5618;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	1/1:8,0:8:5.55:27,6,0	0/0:15,0:12:24.67:0,25,333	0/0:10,0:9:26.87:0,27,325	0/0:19,0:17:32.47:0,32,443	1/1:12,0:12:22.12:116,22,0	1/1:13,2:15:14.71:99,15,0	0/1:23,0:21:24.20:24,0,132	0/0:17,0:17:22.88:0,23,291	0/1:17,3:20:33.28:85,0,33	1/1:16,0:16:2.46:34,2,0	./.	1/1:12,0:12:14.71:74,15,0	1/1:10,0:10:6.07:59,6,0	0/1:15,0:15:20.63:32,0,21	0/1:13,0:13:13.96:115,0,14	0/1:12,0:11:28.34:28,0,134	1/1:12,0:12:7.62:66,8,0	0/1:23,0:20:18.86:148,0,19	1/1:21,0:20:16.71:83,17,0	1/1:13,2:15:29.69:141,30,0	1/1:10,0:9:6.40:65,6,0	1/1:1,0:1:2.96:19,3,0	./.	0/1:24,2:26:6.11:134,0,6	1/1:26,2:26:55.79:308,56,0	1/1:22,1:21:39.83:234,40,0	1/1:1,0:1:2.94:18,3,0
chr10	35012258	.	G	GA	3601.31	PASS	AB=0.827;AC=34;AF=0.680;AN=50;BaseQRankSum=2.414;DP=400;FS=5.678;HRun=0;HaplotypeScore=122.6244;InbreedingCoeff=0.2083;MQ=56.88;MQ0=5;MQRankSum=-0.381;QD=10.23;ReadPosRankSum=1.953;VQSLOD=3.9633;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/0:8,0:8:5.31:0,5,17	0/0:14,0:11:24.55:0,25,331	0/0:11,0:9:26.87:0,27,326	0/1:17,4:19:17.25:17,0,317	1/1:12,1:13:28.97:215,29,0	1/1:10,4:15:28.65:170,29,0	0/1:25,0:23:93.85:127,0,94	0/1:8,0:19:52.43:52,0,186	0/1:15,5:21:59.53:165,0,60	1/1:15,1:16:9.79:77,10,0	./.	1/1:9,3:12:28.69:164,29,0	1/1:10,2:12:18.49:130,18,0	0/0:15,0:15:19.89:0,20,156	0/1:12,2:14:9.64:207,0,10	0/1:7,5:11:75.51:76,0,110	1/1:10,3:13:10.50:103,11,0	0/1:20,3:20:10.89:258,0,11	1/1:18,6:23:35.91:282,36,0	1/1:13,2:15:32.35:213,32,0	1/1:6,4:9:17.21:151,17,0	1/1:1,0:1:3.01:33,3,0	./.	0/1:23,4:27:4.54:253,0,5	1/1:24,5:27:63.91:477,64,0	1/1:27,2:27:42.93:399,43,0	1/1:1,0:1:3.01:32,3,0
chr10	35012660	.	T	TCC	18338.82	PASS	AB=0.545;AC=37;AF=0.771;AN=48;BaseQRankSum=12.970;DP=432;FS=0.425;HRun=1;HaplotypeScore=121.2488;InbreedingCoeff=0.8798;MQ=79.59;MQ0=0;MQRankSum=-6.765;QD=54.26;ReadPosRankSum=1.174;VQSLOD=4.6987;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	1/1:0,6:6:18.06:352,18,0	0/0:21,0:21:60.09:0,60,871	0/0:14,0:14:34.25:0,34,571	0/0:25,0:25:75.23:0,75,1174	1/1:2,21:23:69.22:1283,69,0	1/1:2,18:21:57.18:1066,57,0	1/1:0,25:25:75.23:1374,75,0	0/0:18,0:18:54.18:0,54,881	1/1:3,26:30:90.29:1642,90,0	1/1:1,17:18:53.97:965,54,0	./.	1/1:1,16:18:54.17:978,54,0	1/1:1,15:16:45.15:865,45,0	1/1:1,15:16:48.15:885,48,0	1/1:0,9:9:27.09:516,27,0	0/0:16,0:16:48.16:0,48,782	0/1:1,5:6:27.57:262,0,28	1/1:0,10:11:33.11:608,33,0	1/1:4,25:29:81.24:1450,81,0	1/1:0,10:11:27.09:519,27,0	1/1:1,22:23:69.24:1325,69,0	./.	./.	1/1:0,14:14:42.14:800,42,0	1/1:2,27:29:87.29:1631,87,0	1/1:3,21:24:72.23:1331,72,0	1/1:1,8:9:27.07:487,27,0
chr10	35012724	.	GT	G	8371.08	PASS	AC=38;AF=0.792;AN=48;BaseQRankSum=9.255;DP=409;FS=4.333;HRun=7;HaplotypeScore=85.7790;InbreedingCoeff=0.9889;MQ=62.37;MQ0=0;MQRankSum=-1.262;QD=26.00;ReadPosRankSum=2.325;VQSLOD=5.5733;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	1/1:2,9:11:27.06:275,27,0	0/0:9,0:9:18.49:0,18,209	0/0:11,0:10:22.97:0,23,237	0/0:34,0:34:96.29:0,96,1183	1/1:2,23:25:66.10:662,66,0	1/1:1,11:12:30.07:305,30,0	1/1:3,18:21:54.11:544,54,0	0/0:17,0:17:51.15:0,51,629	1/1:4,13:17:45.10:456,45,0	1/1:5,13:18:48.10:485,48,0	./.	1/1:3,18:21:57.04:556,57,0	1/1:4,14:18:42.05:417,42,0	1/1:4,10:14:30.06:306,30,0	1/1:0,4:4:12.03:122,12,0	0/0:15,0:15:42.13:0,42,527	1/1:1,13:14:33.48:390,33,0	1/1:1,12:13:36.06:361,36,0	1/1:5,26:31:72.12:724,72,0	1/1:0,11:11:30.07:306,30,0	1/1:1,13:14:39.09:398,39,0	./.	./.	1/1:3,8:11:24.05:245,24,0	1/1:8,20:28:72.15:730,72,0	1/1:5,22:27:72.14:722,72,0	1/1:0,12:12:36.08:367,36,0
chr10	35012951	.	TG	T	257.52	PASS	AC=2;AF=0.042;AN=48;BaseQRankSum=3.436;DP=515;FS=4.988;HRun=2;HaplotypeScore=60.5320;InbreedingCoeff=0.9979;MQ=59.65;MQ0=0;MQRankSum=0.040;QD=23.41;ReadPosRankSum=-1.019;VQSLOD=3.0563;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	1/1:0,11:11:26.72:350,27,0	0/0:17,0:14:42.10:0,42,552	0/0:14,0:12:30.02:0,30,418	0/0:27,0:27:75.24:0,75,1103	0/0:23,0:23:66.22:0,66,989	0/0:18,0:18:54.18:0,54,810	0/0:31,0:31:87.28:0,87,1268	0/0:28,0:28:81.26:0,81,1194	0/0:20,0:20:60.16:0,60,874	0/0:12,0:12:33.11:0,33,495	./.	0/0:19,0:19:51.16:0,51,743	0/0:24,0:24:69.23:0,69,1034	0/0:23,0:23:69.23:0,69,1033	0/0:20,0:20:60.20:0,60,899	0/0:33,0:33:93.31:0,93,1390	0/0:20,0:20:60.20:0,60,899	0/0:21,0:21:57.18:0,57,835	0/0:23,0:23:66.21:0,66,969	0/0:28,0:28:84.27:0,84,1235	0/0:24,0:24:72.24:0,72,1076	./.	./.	0/0:14,0:14:42.14:0,42,629	0/0:31,0:31:90.29:0,90,1327	0/0:22,0:22:66.22:0,66,989	0/0:12,0:12:36.12:0,36,539
chr10	35013250	.	GC	G	17273.81	PASS	AC=36;AF=0.750;AN=48;BaseQRankSum=10.916;DP=566;FS=1.237;HRun=1;HaplotypeScore=109.9677;InbreedingCoeff=0.9997;MQ=74.91;MQ0=0;MQRankSum=-4.119;QD=38.99;ReadPosRankSum=0.200;VQSLOD=4.6539;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/0:10,0:10:30.10:0,30,475	0/0:16,0:14:42.14:0,42,664	0/0:19,1:19:51.15:0,51,752	0/0:22,0:22:60.20:0,60,958	1/1:0,18:18:51.13:691,51,0	1/1:0,32:32:90.30:1256,90,0	1/1:0,26:26:78.25:1069,78,0	0/0:27,0:27:81.26:0,81,1268	1/1:0,36:36:99:1465,105,0	1/1:0,13:13:33.11:460,33,0	./.	1/1:0,19:19:54.18:755,54,0	1/1:3,23:26:69.22:949,69,0	1/1:0,28:28:84.28:1175,84,0	1/1:0,21:21:60.20:839,60,0	0/0:28,0:28:84.29:0,84,1342	1/1:0,14:14:39.13:546,39,0	1/1:0,18:18:54.16:737,54,0	1/1:0,17:17:42.14:587,42,0	1/1:0,79:79:99:3147,226,0	1/1:1,19:20:57.19:795,57,0	./.	./.	1/1:0,17:17:42.14:586,42,0	1/1:0,24:24:69.23:965,69,0	1/1:0,25:25:60.20:839,60,0	1/1:0,10:10:30.10:413,30,0
chr10	35014417	.	A	AACAG	20894.63	PASS	AC=38;AF=0.792;AN=48;BaseQRankSum=7.794;DP=410;FS=13.931;HRun=0;HaplotypeScore=119.8039;InbreedingCoeff=0.9972;MQ=56.26;MQ0=2;MQRankSum=-11.483;QD=63.13;ReadPosRankSum=0.718;VQSLOD=6.1985;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	1/1:4,6:10:24.08:604,24,0	0/0:15,0:14:27.96:0,28,447	0/0:16,0:15:35.47:0,35,581	0/0:20,0:20:57.20:0,57,1063	1/1:3,11:14:36.12:938,36,0	1/1:10,10:20:48.12:1131,48,0	1/1:15,11:26:69.16:1667,69,0	0/0:14,0:14:42.11:0,42,749	1/1:6,9:15:36.12:898,36,0	1/1:7,17:23:54.18:1413,54,0	./.	1/1:4,8:12:33.07:808,33,0	1/1:10,14:24:66.23:1675,66,0	1/1:2,18:20:54.19:1417,54,0	1/1:1,8:9:27.09:705,27,0	0/0:14,0:14:42.12:0,42,733	1/1:0,10:10:30.10:799,30,0	1/1:8,14:23:51.13:1271,51,0	1/1:6,11:17:42.14:1077,42,0	1/1:5,11:16:24.08:625,24,0	1/1:4,13:17:39.13:1008,39,0	./.	./.	1/1:3,12:14:33.11:869,33,0	1/1:4,20:24:66.23:1744,66,0	1/1:8,20:27:66.21:1687,66,0	1/1:3,4:7:21.07:558,21,0
chr10	35014432	.	CAA	C	5387.87	PASS	AB=0.923;AC=39;AF=0.813;AN=48;BaseQRankSum=7.804;DP=398;FS=0.520;HRun=13;HaplotypeScore=147.5183;InbreedingCoeff=0.7726;MQ=60.11;MQ0=0;MQRankSum=-8.207;QD=16.58;ReadPosRankSum=2.747;VQSLOD=2.8360;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	1/1:2,0:9:15.66:77,16,0	0/0:17,0:16:31.45:0,31,254	0/1:11,0:10:29.56:30,0,81	0/0:21,0:21:51.95:0,52,711	1/1:2,10:12:27.11:286,27,0	1/1:2,12:15:29.98:340,30,0	1/1:9,18:27:47.99:465,48,0	0/0:16,1:17:12.25:0,12,488	1/1:1,15:16:36.03:349,36,0	1/1:7,19:26:36.65:451,37,0	./.	1/1:4,8:12:24.01:233,24,0	1/1:2,17:19:51.05:494,51,0	1/1:4,11:15:32.97:320,33,0	1/1:4,3:8:2.91:79,3,0	0/0:17,0:17:42.14:0,42,595	1/1:8,1:9:5.91:58,6,0	1/1:9,11:21:38.40:340,38,0	1/1:0,14:16:28.18:313,28,0	1/1:4,8:12:11.73:113,12,0	1/1:5,12:19:29.68:272,30,0	./.	./.	1/1:7,13:20:35.99:347,36,0	1/1:13,12:25:23.95:315,24,0	1/1:8,13:22:29.92:340,30,0	1/1:4,6:10:12.96:166,13,0
chr10	35014659	.	CT	C	3514.43	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=2.049;DP=674;FS=9.018;HRun=1;HaplotypeScore=91.9767;InbreedingCoeff=0.9996;MQ=66.43;MQ0=0;MQRankSum=1.448;QD=39.94;ReadPosRankSum=3.676;VQSLOD=3.7770;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:63.21:0,63,1006	0/0:13,0:13:39.13:0,39,621	0/0:22,0:21:60.19:0,60,919	0/0:32,0:28:78.23:0,78,1209	1/1:0,26:26:72.24:999,72,0	0/0:12,0:12:33.11:0,33,524	0/0:21,0:21:60.18:0,60,911	0/0:27,0:27:78.26:0,78,1226	1/1:0,25:25:72.24:1006,72,0	0/0:24,0:24:72.25:0,72,1151	0/0:21,0:21:54.18:0,54,863	0/0:14,0:14:30.10:0,30,479	0/0:18,0:18:48.16:0,48,767	0/0:23,0:23:60.19:0,60,935	0/0:31,0:31:75.24:0,75,1177	0/0:14,0:14:42.14:0,42,672	1/1:0,37:37:99:1509,108,0	0/0:16,0:16:45.15:0,45,720	0/0:24,0:23:66.22:0,66,1027	0/0:26,0:26:75.26:0,75,1199	0/0:60,0:60:99:0,172,2708	0/0:26,0:26:69.22:0,69,1081	0/0:21,0:21:54.18:0,54,861	0/0:19,0:19:42.14:0,42,671	0/0:31,0:31:90.29:0,90,1415	0/0:26,0:26:78.27:0,78,1247	0/0:27,0:27:69.22:0,69,1080	0/0:11,0:10:33.11:0,33,527
chr10	35014725	.	A	AG	19309.30	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-2.957;DP=645;FS=7.167;HRun=1;HaplotypeScore=93.6012;InbreedingCoeff=0.9905;MQ=56.03;MQ0=1;MQRankSum=2.264;QD=37.42;ReadPosRankSum=2.550;VQSLOD=5.1815;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,55:57:99:2156,153,0	1/1:0,6:6:18.02:245,18,0	0/0:24,0:14:39.13:0,39,502	0/0:33,0:26:72.07:0,72,846	0/0:21,0:21:60.20:0,60,779	1/1:2,15:17:42.14:630,42,0	1/1:0,32:32:87.23:1276,87,0	1/1:2,21:23:63.20:922,63,0	0/0:19,0:19:54.16:0,54,686	1/1:0,24:24:72.24:1068,72,0	1/1:1,19:20:53.79:694,54,0	1/1:0,20:20:48.09:692,48,0	1/1:0,19:19:51.10:737,51,0	1/1:1,20:21:54.18:809,54,0	1/1:0,25:25:63.21:944,63,0	1/1:0,21:21:60.20:899,60,0	0/0:31,0:31:87.28:0,87,1130	1/1:0,13:13:30.10:450,30,0	1/1:2,8:10:27.09:404,27,0	1/1:0,22:22:57.19:834,57,0	1/1:2,44:46:99:1636,111,0	1/1:3,18:21:48.03:665,48,0	1/1:0,14:14:30.10:442,30,0	1/1:1,22:23:51.17:764,51,0	1/1:0,22:22:57.12:821,57,0	1/1:2,29:31:84.24:1196,84,0	1/1:0,23:23:57.19:848,57,0	1/1:2,4:6:12.04:180,12,0
chr10	35015881	.	CAGAGG	C	13791.04	PASS	AC=46;AF=0.958;AN=48;BaseQRankSum=-2.952;DP=396;FS=9.148;HRun=0;HaplotypeScore=87.8173;InbreedingCoeff=0.6209;MQ=45.12;MQ0=10;MQRankSum=-0.996;QD=36.29;ReadPosRankSum=1.991;VQSLOD=3.7499;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	1/1:0,6:6:15.05:320,15,0	1/1:16,0:5:6.40:42,6,0	0/0:16,0:6:9.03:0,9,182	1/1:1,26:21:33.11:703,33,0	1/1:0,19:17:27.09:575,27,0	1/1:1,8:6:9.03:186,9,0	1/1:0,6:6:18.01:279,18,0	1/1:1,16:16:45.15:959,45,0	1/1:2,17:16:38.70:713,39,0	1/1:1,14:12:21.07:447,21,0	./.	1/1:0,20:18:39.13:831,39,0	1/1:0,11:11:27.09:575,27,0	1/1:0,25:21:48:986,48,0	1/1:0,11:9:18.06:384,18,0	1/1:0,2:1:3.01:64,3,0	1/1:1,9:7:15.05:320,15,0	1/1:1,13:11:33.11:687,33,0	1/1:2,20:18:33.11:697,33,0	1/1:2,3:5:9.03:192,9,0	1/1:1,24:23:51.17:1046,51,0	./.	./.	1/1:0,27:24:54.19:1150,54,0	1/1:1,21:22:51.17:1036,51,0	1/1:1,40:37:63.20:1292,63,0	1/1:0,10:7:15.05:310,15,0
chr10	35016690	.	T	TAAAAAA	8992.62	PASS	AB=1.000;AC=40;AF=0.833;AN=48;BaseQRankSum=6.665;DP=468;FS=6.629;HRun=10;HaplotypeScore=109.2916;InbreedingCoeff=0.6578;MQ=54.85;MQ0=9;MQRankSum=-6.833;QD=23.18;ReadPosRankSum=-3.372;VQSLOD=1.3684;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	1/1:3,5:8:6.02:182,6,0	0/1:15,0:8:1.08:1,0,168	0/1:15,0:10:7.55:8,0,125	0/0:31,0:32:78.06:0,78,1275	1/1:5,0:22:27.09:590,27,0	1/1:2,0:11:12.04:262,12,0	1/1:8,0:15:33.76:437,34,0	0/0:17,0:17:45.01:0,45,728	1/1:11,0:24:45.09:695,45,0	1/1:7,0:24:42.03:773,42,0	./.	1/1:2,0:11:6.02:131,6,0	1/1:0,0:9:3.01:66,3,0	1/1:8,0:18:21.07:388,21,0	1/1:3,0:9:15.05:328,15,0	0/0:31,0:31:78.09:0,78,1269	1/1:8,0:11:19.29:305,19,0	1/1:6,1:13:27.05:517,27,0	1/1:9,1:42:70.35:1229,70,0	1/1:4,0:12:5.98:66,6,0	1/1:10,0:25:39.09:709,39,0	./.	./.	1/1:5,1:20:24.08:472,24,0	1/1:5,0:33:85.16:1288,85,0	1/1:5,0:18:18.01:383,18,0	1/1:10,7:17:6.02:163,6,0
chr10	35017299	.	T	TA	10212.74	PASS	AC=38;AF=0.731;AN=52;BaseQRankSum=10.308;DP=555;FS=5.581;HRun=2;HaplotypeScore=100.0516;InbreedingCoeff=0.9283;MQ=53.11;MQ0=25;MQRankSum=-3.445;QD=23.59;ReadPosRankSum=3.189;VQSLOD=4.6341;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:2:2.99:0,3,23	1/1:7,1:8:8.24:77,8,0	0/0:12,0:10:30.10:0,30,419	0/0:13,0:12:13.27:0,13,270	0/0:30,0:30:84.22:0,84,1132	1/1:9,25:30:54.16:624,54,0	1/1:1,12:13:26.97:295,27,0	1/1:4,14:15:34.91:382,35,0	0/0:17,0:17:51.11:0,51,674	1/1:3,16:18:48:542,48,0	1/1:7,28:31:72.67:816,73,0	./.	1/1:7,18:24:29.06:533,29,0	1/1:4,11:14:30.09:342,30,0	1/1:3,19:20:39.11:451,39,0	1/1:4,12:15:14.59:384,15,0	0/0:24,0:22:51.89:0,52,683	1/1:9,25:31:82.92:931,83,0	1/1:6,15:14:39.12:465,39,0	1/1:11,16:22:54.07:614,54,0	1/1:4,22:25:69.15:784,69,0	1/1:3,14:15:39.11:446,39,0	./.	0/0:13,0:8:6.86:0,7,49	1/1:7,14:20:32.12:514,32,0	1/1:7,28:31:74.58:870,75,0	1/1:9,22:28:68.79:794,69,0	1/1:2,12:14:30.08:348,30,0
chr10	35017544	.	TA	T	3527.42	PASS	AC=38;AF=0.864;AN=44;BaseQRankSum=8.763;DP=420;FS=0.000;HRun=9;HaplotypeScore=38.6813;InbreedingCoeff=0.8722;MQ=38.50;MQ0=29;MQRankSum=-8.619;QD=10.82;ReadPosRankSum=-2.458;VQSLOD=1.1105;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	1/1:0,5:4:12.01:110,12,0	./.	./.	0/0:34,0:30:63.11:0,63,710	1/1:4,19:19:12:110,12,0	1/1:2,9:9:21.01:192,21,0	1/1:19,10:11:17.90:148,18,0	0/0:20,0:19:45.13:0,45,517	1/1:5,20:14:36.02:329,36,0	1/1:5,18:15:33:296,33,0	./.	1/1:2,11:13:17.05:143,17,0	1/1:2,8:9:12.01:110,12,0	1/1:3,13:14:18.01:164,18,0	1/1:1,10:10:18:165,18,0	0/0:29,0:29:72.21:0,72,831	1/1:1,10:10:24.01:220,24,0	1/1:7,5:6:15.01:137,15,0	1/1:2,18:17:30.01:274,30,0	1/1:0,4:4:6:55,6,0	1/1:1,15:14:21.01:192,21,0	./.	./.	1/1:3,15:14:15.01:137,15,0	1/1:6,19:17:41.05:362,41,0	1/1:2,33:29:36.02:329,36,0	1/1:1,10:10:6:55,6,0
chr10	35019019	.	A	AT	10288.85	PASS	AC=38;AF=0.792;AN=48;BaseQRankSum=3.848;DP=454;FS=14.896;HRun=0;HaplotypeScore=53.2643;InbreedingCoeff=0.9701;MQ=49.50;MQ0=9;MQRankSum=-6.337;QD=31.27;ReadPosRankSum=5.223;VQSLOD=3.3702;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	1/1:0,8:6:9.03:140,9,0	0/0:26,0:18:53.95:0,54,650	0/0:17,0:15:42.11:0,42,540	0/0:32,0:32:87.23:0,87,1148	1/1:0,22:18:36.12:561,36,0	1/1:0,5:5:12.04:168,12,0	1/1:1,12:10:30.08:444,30,0	0/0:26,0:26:78.26:0,78,1090	1/1:0,29:25:72.23:1101,72,0	1/1:0,29:28:48.16:747,48,0	./.	1/1:1,10:11:24.08:361,24,0	1/1:0,12:11:24.08:374,24,0	1/1:0,16:16:27.09:420,27,0	1/1:0,11:11:27.09:421,27,0	0/0:22,2:24:19.57:0,20,796	1/1:0,8:7:15.05:234,15,0	1/1:1,11:11:33.01:439,33,0	1/1:0,34:33:75.25:1170,75,0	1/1:0,14:12:33.06:486,33,0	1/1:0,18:18:36.12:559,36,0	./.	./.	1/1:1,25:24:48.16:748,48,0	1/1:0,26:24:63.21:981,63,0	1/1:0,28:24:42.14:653,42,0	1/1:0,6:6:18.06:281,18,0
chr10	35019196	.	C	CG	8982.36	PASS	AC=38;AF=0.792;AN=48;BaseQRankSum=8.023;DP=389;FS=20.891;HRun=0;HaplotypeScore=55.7349;InbreedingCoeff=0.9814;MQ=48.70;MQ0=11;MQRankSum=-5.017;QD=30.66;ReadPosRankSum=2.147;VQSLOD=3.4423;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	1/1:0,8:7:18.06:285,18,0	0/0:21,0:11:26.96:0,27,351	0/0:16,0:7:21.06:0,21,275	0/0:22,0:22:66.22:0,66,921	1/1:0,18:14:33.11:525,33,0	1/1:0,15:13:30.10:476,30,0	1/1:1,16:15:39.12:599,39,0	0/0:19,0:19:54.18:0,54,745	1/1:2,25:24:66.17:991,66,0	1/1:1,18:16:39.13:621,39,0	./.	1/1:1,13:13:21.07:334,21,0	1/1:0,13:12:24.08:380,24,0	1/1:0,19:16:30.10:477,30,0	1/1:0,13:10:18.06:287,18,0	0/0:16,1:17:17.51:0,18,598	1/1:1,8:6:12.04:191,12,0	1/1:1,15:12:27.09:431,27,0	1/1:0,17:14:36.12:571,36,0	1/1:0,10:9:21.07:335,21,0	1/1:0,16:16:36.12:574,36,0	./.	./.	1/1:0,14:12:24.08:383,24,0	1/1:0,18:15:42.09:632,42,0	1/1:0,16:12:29.85:476,30,0	1/1:0,13:9:27.09:415,27,0
chr10	35019478	.	CA	C	5557.70	PASS	AC=38;AF=0.792;AN=48;BaseQRankSum=10.412;DP=347;FS=1.145;HRun=7;HaplotypeScore=88.9912;InbreedingCoeff=0.9529;MQ=47.16;MQ0=11;MQRankSum=-3.757;QD=22.59;ReadPosRankSum=4.005;VQSLOD=4.6367;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	1/1:1,6:6:18.04:183,18,0	0/0:19,2:9:24.06:0,24,285	0/0:19,0:6:15.05:0,15,189	0/0:24,0:24:57.14:0,57,697	1/1:0,10:10:24.01:232,24,0	1/1:0,8:8:18.03:183,18,0	1/1:2,8:9:21.05:213,21,0	0/0:6,0:6:15.05:0,15,189	1/1:4,17:20:51.08:511,51,0	1/1:0,18:16:27.05:275,27,0	./.	1/1:0,10:10:18.04:183,18,0	1/1:2,9:11:21.05:214,21,0	1/1:1,9:10:27.06:273,27,0	1/1:0,9:9:24.05:245,24,0	0/0:31,0:31:81.19:0,81,973	1/1:2,6:8:21.03:207,21,0	1/1:2,2:3:6.01:61,6,0	1/1:2,27:28:69.15:703,69,0	1/1:1,10:11:18.04:184,18,0	1/1:2,25:27:60.13:609,60,0	./.	./.	1/1:3,11:11:27.06:275,27,0	1/1:0,13:13:36.08:363,36,0	1/1:0,18:18:45.10:459,45,0	1/1:0,8:6:18.04:184,18,0
chr10	35019582	.	AAAC	A	986.03	PASS	AC=22;AF=0.647;AN=34;BaseQRankSum=6.889;DP=195;FS=48.605;HRun=0;HaplotypeScore=36.8508;InbreedingCoeff=0.6385;MQ=45.59;MQ0=7;MQRankSum=-6.746;QD=16.16;ReadPosRankSum=-0.413;VQSLOD=1.1256;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:19,0:9:27.09:0,27,656	0/0:12,0:9:24.08:0,24,504	0/0:37,0:37:99:0,105,2419	1/1:0,3:2:3.01:53,3,0	1/1:0,4:4:9.03:158,9,0	1/1:0,6:6:18.02:281,18,0	0/0:16,0:16:42.14:0,42,995	1/1:0,3:2:6.02:105,6,0	1/1:0,10:8:3:52,3,0	./.	./.	./.	./.	1/1:0,3:3:6.02:105,6,0	0/0:27,0:27:75.26:0,75,1792	0/0:1,0:1:1.82:0,2,5	./.	1/1:0,12:10:3.01:53,3,0	./.	./.	./.	./.	1/1:0,9:8:3:53,3,0	1/1:0,5:4:9.03:158,9,0	1/1:0,3:1:3.01:53,3,0	1/1:0,3:2:3.01:53,3,0
chr10	35019706	.	GA	G	1512.08	PASS	AB=0.800;AC=29;AF=0.690;AN=42;BaseQRankSum=7.677;DP=229;FS=12.527;HRun=1;HaplotypeScore=35.2790;InbreedingCoeff=0.5476;MQ=55.54;MQ0=13;MQRankSum=-5.797;QD=20.16;ReadPosRankSum=1.950;VQSLOD=2.2733;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:3,0:3:3.01:0,3,48	1/1:0,2:1:3.01:42,3,0	0/0:38,0:10:29.59:0,30,429	0/0:31,0:14:28.53:0,29,363	0/0:31,0:31:87.30:0,87,1372	1/1:0,2:2:3.01:42,3,0	1/1:0,2:1:3.01:41,3,0	1/1:1,2:1:3.01:42,3,0	0/0:25,0:25:75.22:0,75,1148	1/1:1,8:8:15.05:210,15,0	1/1:0,10:9:21.07:293,21,0	./.	1/1:0,1:1:3.01:42,3,0	./.	1/1:0,3:2:3.01:42,3,0	./.	0/0:23,0:23:54.14:0,54,808	./.	0/1:3,1:2:21.05:36,0,21	1/1:0,8:5:12.04:166,12,0	./.	1/1:0,15:11:27.09:375,27,0	./.	./.	1/1:0,5:3:3.01:42,3,0	1/1:0,1:1:3.01:42,3,0	1/1:0,5:3:3.01:42,3,0	1/1:0,5:5:15.05:209,15,0
chr10	35019914	.	TAAACA	T	1355.79	PASS	AC=30;AF=0.750;AN=40;BaseQRankSum=7.343;DP=186;FS=56.081;HRun=0;HaplotypeScore=48.3408;InbreedingCoeff=0.6147;MQ=50.84;MQ0=9;MQRankSum=-7.571;QD=22.98;ReadPosRankSum=-0.994;VQSLOD=1.2353;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:28,0:3:9.03:0,9,248	0/0:27,0:4:12.04:0,12,396	0/0:24,0:24:69.24:0,69,2296	1/1:1,1:2:3.01:52,3,0	./.	./.	0/0:22,0:22:63.21:0,63,2011	1/1:1,8:9:21.03:346,21,0	1/1:0,4:4:3.01:51,3,0	./.	1/1:0,3:2:6.02:104,6,0	./.	1/1:1,2:2:5.95:70,6,0	1/1:1,1:2:5.95:70,6,0	0/0:23,0:23:60.21:0,60,1955	1/1:2,1:2:3.01:53,3,0	1/1:1,1:1:2.98:21,3,0	1/1:0,5:5:9.03:154,9,0	1/1:4,1:5:11.85:107,12,0	1/1:0,6:6:3.01:51,3,0	./.	./.	1/1:1,4:5:6.02:104,6,0	1/1:1,1:2:3:27,3,0	1/1:0,6:5:15.05:257,15,0	1/1:2,0:2:5.91:38,6,0
chr10	35019920	.	GAACACC	G	1203	PASS	AC=24;AF=0.706;AN=34;BaseQRankSum=6.968;DP=172;FS=39.333;HRun=0;HaplotypeScore=51.9985;InbreedingCoeff=0.6156;MQ=52.03;MQ0=14;MQRankSum=-6.816;QD=29.34;ReadPosRankSum=0.351;VQSLOD=1.2101;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:29,0:3:9.03:0,9,264	0/0:28,0:4:12.04:0,12,382	0/0:24,0:24:69.22:0,69,2228	1/1:0,1:1:3.01:53,3,0	./.	./.	0/0:22,0:22:60.19:0,60,2037	1/1:0,8:8:18.06:333,18,0	1/1:1,2:3:3.01:52,3,0	./.	1/1:0,3:2:6.02:106,6,0	./.	1/1:0,2:1:3.01:53,3,0	1/1:0,1:1:3.01:53,3,0	0/0:24,0:24:60.21:0,60,2097	1/1:0,1:1:3.01:54,3,0	./.	1/1:0,5:5:9.03:158,9,0	1/1:0,1:1:3.01:53,3,0	1/1:4,2:6:3.01:52,3,0	./.	./.	1/1:0,4:4:6.02:106,6,0	./.	1/1:0,6:5:15.05:264,15,0	./.
chr10	35020071	.	A	AG	2037.82	PASS	AC=32;AF=0.762;AN=42;BaseQRankSum=7.618;DP=252;FS=43.065;HRun=2;HaplotypeScore=36.4929;InbreedingCoeff=0.7000;MQ=63.12;MQ0=2;MQRankSum=-7.720;QD=16.98;ReadPosRankSum=1.009;VQSLOD=1.1357;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	1/1:0,6:5:12.04:173,12,0	0/0:19,0:18:54.16:0,54,658	0/0:20,0:14:39.12:0,39,480	0/0:32,0:32:90.27:0,90,1102	1/1:1,17:14:12.04:172,12,0	1/1:0,4:2:3.01:43,3,0	1/1:1,9:8:24.08:345,24,0	0/0:21,0:21:63.19:0,63,768	1/1:2,0:2:2.97:20,3,0	1/1:2,11:11:15.05:216,15,0	./.	1/1:2,5:6:3.01:43,3,0	./.	./.	1/1:1,6:5:2.97:20,3,0	0/0:26,1:27:66.19:0,66,806	1/1:0,4:4:9.03:129,9,0	1/1:0,11:9:18.06:256,18,0	1/1:1,7:8:12.04:172,12,0	1/1:0,4:3:3.01:43,3,0	1/1:1,5:6:9.03:129,9,0	./.	./.	1/1:0,8:8:21.07:302,21,0	./.	1/1:0,10:5:6.02:86,6,0	1/1:0,2:2:3.01:43,3,0
chr10	35021275	.	CA	C	697.06	PASS	AC=22;AF=0.688;AN=32;BaseQRankSum=7.061;DP=128;FS=4.626;HRun=2;HaplotypeScore=54.7229;InbreedingCoeff=0.5586;MQ=66.65;MQ0=0;MQRankSum=-5.995;QD=14.52;ReadPosRankSum=1.294;VQSLOD=3.1954;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	1/1:0,3:3:6.02:71,6,0	0/0:7,0:7:0.47:0,0,154	0/0:11,0:7:1.85:0,2,117	0/0:18,0:18:52.30:0,52,481	./.	1/1:0,2:1:3.01:35,3,0	1/1:1,3:3:6.02:73,6,0	0/0:12,0:12:36.12:0,36,531	1/1:1,6:5:9.03:109,9,0	./.	./.	./.	./.	./.	1/1:0,3:1:3.01:35,3,0	0/0:23,0:22:66.20:0,66,927	./.	1/1:0,1:1:3.01:39,3,0	1/1:1,7:8:6.02:71,6,0	./.	1/1:1,8:9:15.04:175,15,0	./.	./.	1/1:0,5:5:9.03:106,9,0	1/1:0,3:2:3.01:35,3,0	./.	1/1:0,3:3:6.02:73,6,0
chr10	35021278	.	TGG	T	446.83	PASS	AC=18;AF=0.600;AN=30;BaseQRankSum=6.465;DP=134;FS=5.527;HRun=11;HaplotypeScore=60.0640;InbreedingCoeff=0.6461;MQ=73.13;MQ0=0;MQRankSum=-5.904;QD=10.39;ReadPosRankSum=1.310;VQSLOD=1.1929;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	1/1:0,3:3:6.01:57,6,0	0/0:8,0:8:8.27:0,8,105	0/0:11,0:8:4.52:0,5,24	0/0:8,0:19:38.56:0,39,168	./.	1/1:0,2:1:3:28,3,0	1/1:3,1:3:3:29,3,0	0/0:16,0:16:42.07:0,42,532	1/1:0,7:5:9.02:88,9,0	0/0:1,4:5:0:0,0,0	./.	./.	./.	./.	1/1:0,3:1:3:28,3,0	0/0:21,0:22:53.66:0,54,776	./.	./.	1/1:1,6:7:6.01:57,6,0	./.	1/1:1,8:9:15.02:140,15,0	./.	./.	1/1:0,5:5:9.01:86,9,0	./.	./.	1/1:0,3:3:6.01:59,6,0
chr10	35021323	.	GGA	G	1295.40	PASS	AC=18;AF=0.643;AN=28;BaseQRankSum=7.490;DP=129;FS=2.906;HRun=0;HaplotypeScore=66.9370;InbreedingCoeff=0.8065;MQ=70.28;MQ0=0;MQRankSum=-7.259;QD=23.99;ReadPosRankSum=0.370;VQSLOD=3.5990;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	1/1:0,3:3:6.02:93,6,0	0/0:14,0:12:26.61:0,27,403	0/0:8,0:7:18.05:0,18,304	0/0:17,0:17:48.13:0,48,883	./.	1/1:0,1:1:3.01:47,3,0	1/1:0,2:1:2.98:21,3,0	0/0:10,0:10:30.09:0,30,562	1/1:2,4:4:12.03:165,12,0	1/1:0,5:4:9.03:138,9,0	./.	./.	./.	./.	./.	0/0:23,0:22:66.17:0,66,1188	./.	./.	1/1:0,15:15:27.09:405,27,0	./.	1/1:0,9:8:18.02:251,18,0	./.	./.	1/1:0,8:8:15.05:217,15,0	./.	./.	1/1:0,5:4:6.02:93,6,0
chr10	35021502	.	AAGC	A	6937.06	PASS	AB=0.647;AC=37;AF=0.771;AN=48;BaseQRankSum=10.922;DP=244;FS=129.735;HRun=0;HaplotypeScore=75.8926;InbreedingCoeff=0.8229;MQ=86.71;MQ0=0;MQRankSum=-9.484;QD=43.91;ReadPosRankSum=0.794;VQSLOD=1.2808;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	1/1:2,3:5:15.05:251,15,0	0/0:12,0:12:36.12:0,36,792	0/0:17,0:17:51.16:0,51,1002	0/0:28,0:28:78.23:0,78,1686	1/1:1,10:11:30.10:510,30,0	1/1:2,6:8:21:324,21,0	1/1:1,15:16:45.15:766,45,0	0/0:18,0:18:54.19:0,54,1245	1/1:5,12:17:42.09:649,42,0	1/1:0,5:5:12.04:205,12,0	./.	1/1:1,4:5:12.04:204,12,0	1/1:1,4:5:15.04:229,15,0	1/1:1,6:7:18.06:306,18,0	0/1:5,6:11:64.11:333,0,64	0/0:11,0:11:33.08:0,33,659	1/1:1,6:7:21.07:354,21,0	1/1:0,6:6:18.04:274,18,0	1/1:1,6:7:21.03:326,21,0	1/1:2,3:5:9.03:152,9,0	1/1:0,9:9:27.09:446,27,0	./.	./.	1/1:2,6:8:24.08:391,24,0	1/1:2,8:10:27.09:435,27,0	1/1:1,13:14:42.08:681,42,0	1/1:0,2:2:6.02:102,6,0
chr10	35021529	.	T	TA	4540.78	PASS	AB=0.633;AC=33;AF=0.688;AN=48;BaseQRankSum=10.043;DP=279;FS=23.292;HRun=5;HaplotypeScore=95.3216;InbreedingCoeff=0.6794;MQ=90.00;MQ0=0;MQRankSum=-9.074;QD=25.23;ReadPosRankSum=0.306;VQSLOD=3.1152;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	0/0:5,0:5:4.98:0,5,12	0/0:15,0:14:19.73:0,20,255	0/0:21,0:21:47.33:0,47,488	0/0:30,0:30:63.14:0,63,669	1/1:2,9:11:27.56:336,28,0	1/1:1,7:8:21.07:259,21,0	1/1:3,12:15:36.11:447,36,0	0/0:13,0:13:36.06:0,36,377	1/1:6,12:18:40.68:488,41,0	1/1:2,3:5:5.93:40,6,0	./.	1/1:0,5:5:15:168,15,0	1/1:3,5:8:15.49:171,15,0	1/1:1,6:7:18.06:223,18,0	0/1:5,9:14:31.40:302,0,31	0/0:14,0:14:39.10:0,39,418	1/1:2,4:6:12.04:149,12,0	0/1:6,6:12:10.89:235,0,11	0/1:4,6:10:1.65:169,0,2	1/1:3,4:7:9.03:112,9,0	1/1:4,4:8:15.48:169,15,0	./.	./.	1/1:2,7:9:18.01:205,18,0	1/1:3,8:11:26.11:305,26,0	1/1:4,14:18:42.13:518,42,0	1/1:0,8:8:21.03:244,21,0
chr10	35021534	.	AG	A	2170.15	PASS	AB=1.000;AC=37;AF=0.771;AN=48;BaseQRankSum=12.007;DP=285;FS=24.219;HRun=1;HaplotypeScore=102.3562;InbreedingCoeff=0.8046;MQ=93.76;MQ0=0;MQRankSum=-10.790;QD=11.54;ReadPosRankSum=0.715;VQSLOD=0.6991;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	1/1:0,5:5:12.04:167,12,0	0/0:17,0:15:32.20:0,32,468	0/0:22,1:23:47.03:0,47,699	0/0:31,0:31:75.12:0,75,969	1/1:13,0:13:33.88:183,34,0	1/1:8,0:8:19.34:100,19,0	1/1:15,0:15:37.35:190,37,0	0/0:13,0:13:39.12:0,39,538	1/1:17,0:17:38.61:194,39,0	1/1:6,0:6:12.81:82,13,0	./.	1/1:7,0:7:18.18:107,18,0	1/1:7,0:7:14.47:73,14,0	1/1:8,0:8:19.10:87,19,0	0/1:13,0:13:55.48:86,0,55	0/0:13,0:13:39.13:0,39,551	1/1:5,0:5:11.23:55,11,0	1/1:12,0:12:4.60:112,5,0	1/1:11,0:11:16.25:139,16,0	1/1:6,0:6:11.52:66,12,0	1/1:8,0:8:9.08:84,9,0	./.	./.	1/1:11,0:11:25.57:148,26,0	1/1:11,0:11:28.38:159,28,0	1/1:17,0:17:44.57:228,45,0	1/1:8,0:8:17.29:84,17,0
chr10	35022083	.	C	CACAA	16006.43	PASS	AB=0.538;AC=37;AF=0.771;AN=48;BaseQRankSum=11.189;DP=423;FS=17.059;HRun=0;HaplotypeScore=109.5496;InbreedingCoeff=0.8217;MQ=54.88;MQ0=0;MQRankSum=-11.358;QD=52.48;ReadPosRankSum=-0.129;VQSLOD=4.9990;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	1/1:0,0:7:17.76:118,18,0	0/0:16,0:15:29.32:0,29,534	0/0:17,0:17:45.02:0,45,729	0/0:30,0:30:90.22:0,90,1579	1/1:1,7:10:18.06:451,18,0	1/1:2,6:8:17.55:373,18,0	1/1:5,18:21:54.09:1073,54,0	0/0:23,0:23:66.16:0,66,1220	1/1:2,17:21:57.09:1390,57,0	1/1:1,17:20:50.96:1043,51,0	./.	1/1:1,18:19:42.14:1141,42,0	1/1:0,13:14:27.09:751,27,0	1/1:0,9:10:24.08:668,24,0	0/1:2,11:14:23.57:792,0,24	0/0:30,0:30:90.29:0,90,1711	1/1:0,6:6:8.98:186,9,0	1/1:2,11:14:36.05:729,36,0	1/1:6,26:33:84.18:2023,84,0	1/1:4,5:10:6.02:159,6,0	1/1:2,19:22:54.14:1347,54,0	./.	./.	1/1:1,17:20:36.12:944,36,0	1/1:4,14:21:60.07:1148,60,0	1/1:5,20:28:57.20:1524,57,0	1/1:0,3:3:6.02:147,6,0
chr10	35022624	.	C	CAAA	11061.54	PASS	AB=0.889;AC=47;AF=0.839;AN=56;BaseQRankSum=2.884;DP=477;FS=1.055;HRun=10;HaplotypeScore=95.4753;InbreedingCoeff=0.7677;MQ=78.81;MQ0=0;MQRankSum=-4.418;QD=28.44;ReadPosRankSum=-2.100;VQSLOD=3.6233;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,21:26:54.63:952,55,0	1/1:2,0:6:4.98:12,5,0	0/0:20,0:22:26.10:0,26,399	0/1:7,0:8:64.79:65,0,78	0/0:31,0:31:72.06:0,72,857	1/1:5,15:22:36.10:638,36,0	1/1:3,8:13:30.08:490,30,0	1/1:11,10:26:54.07:825,54,0	0/0:20,0:20:45.02:0,45,547	1/1:13,15:30:51.16:878,51,0	1/1:5,12:21:54.08:800,54,0	1/1:5,0:11:18.06:251,18,0	1/1:4,11:16:18.06:322,18,0	1/1:1,2:3:3.01:58,3,0	1/1:4,11:17:17.75:328,18,0	1/1:0,12:16:33.09:536,33,0	0/0:15,0:15:42.11:0,42,498	1/1:1,7:9:12.02:196,12,0	1/1:9,11:21:45.14:771,45,0	1/1:3,14:19:45.12:655,45,0	1/1:3,5:10:9.03:154,9,0	1/1:4,11:17:42.12:577,42,0	1/1:3,0:15:30.10:432,30,0	1/1:3,0:11:12.04:171,12,0	1/1:6,5:12:12.04:194,12,0	1/1:7,3:28:63.10:880,63,0	1/1:5,12:19:24.06:395,24,0	1/1:2,9:12:27.07:484,27,0
chr10	35022923	.	CAAA	C	4241.56	PASS	AB=0.882;AC=37;AF=0.661;AN=56;BaseQRankSum=3.612;DP=395;FS=9.869;HRun=16;HaplotypeScore=81.1138;InbreedingCoeff=0.7002;MQ=74.30;MQ0=1;MQRankSum=-2.677;QD=16.50;ReadPosRankSum=4.576;VQSLOD=3.1982;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:19:27.09:0,27,391	0/0:6,0:6:12.03:0,12,174	0/1:20,0:14:12.47:12,0,120	0/1:21,0:14:12.93:13,0,96	0/0:19,0:30:73.25:0,73,938	1/1:2,9:13:29.99:334,30,0	1/1:2,4:6:12:128,12,0	1/1:11,4:17:13.20:140,13,0	0/0:9,0:13:36.06:0,36,518	1/1:4,6:12:19.21:208,19,0	1/1:2,11:15:30.51:336,31,0	0/0:8,0:8:12.02:0,12,145	1/1:1,11:13:10.18:300,10,0	1/1:7,7:15:25.41:282,25,0	1/1:5,5:11:14.78:188,15,0	1/1:0,2:2:6.02:65,6,0	0/0:32,0:33:75.21:0,75,1217	1/1:4,5:9:17.67:173,18,0	0/1:5,6:11:23.49:209,0,23	1/1:8,9:17:32.85:347,33,0	1/1:2,2:3:5.90:49,6,0	1/1:3,8:11:23.94:258,24,0	0/0:11,0:20:18.04:0,18,239	0/0:7,0:7:12.04:0,12,189	1/1:4,7:13:22.90:282,23,0	1/1:6,11:18:34.53:370,35,0	1/1:5,12:19:40.43:434,40,0	1/1:5,3:8:11.82:113,12,0
chr10	35022989	.	G	GA	6650.81	PASS	AB=0.577;AC=34;AF=0.607;AN=56;BaseQRankSum=-5.780;DP=406;FS=0.874;HRun=9;HaplotypeScore=56.8165;InbreedingCoeff=0.7925;MQ=66.92;MQ0=0;MQRankSum=-0.638;QD=24.27;ReadPosRankSum=-0.700;VQSLOD=5.3212;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:35.99:0,36,313	0/0:10,0:10:26.99:0,27,234	0/0:10,0:7:8.06:0,8,114	0/0:10,0:9:11.65:0,12,92	0/0:27,0:27:65.94:0,66,569	1/1:2,13:15:36.10:398,36,0	1/1:0,12:12:33.09:365,33,0	1/1:5,23:29:35.73:708,36,0	0/0:11,0:11:29.99:0,30,260	1/1:6,14:20:22.04:449,22,0	1/1:2,11:13:30.08:332,30,0	0/0:4,0:4:12:0,12,104	1/1:3,10:13:27.07:299,27,0	1/1:1,14:16:44.95:479,45,0	1/1:0,11:11:27.07:297,27,0	0/1:1,5:6:8.01:148,0,8	0/0:20,0:21:55.98:0,56,465	1/1:0,15:15:42.11:464,42,0	1/1:5,16:21:25.08:498,25,0	1/1:5,11:16:9.99:325,10,0	0/1:5,9:14:68.12:229,0,68	1/1:2,14:16:7.04:306,7,0	0/0:15,0:15:32.97:0,33,286	0/0:9,0:9:20.94:0,21,175	1/1:3,10:13:7.03:306,7,0	1/1:6,16:22:50.93:544,51,0	1/1:4,16:20:19.08:438,19,0	1/1:0,2:2:6.02:66,6,0
chr10	35023726	.	T	TA	52.43	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=1.478;DP=518;FS=3.869;HRun=8;HaplotypeScore=73.5217;InbreedingCoeff=0.9610;MQ=84.99;MQ0=0;MQRankSum=-2.352;QD=13.11;ReadPosRankSum=1.028;VQSLOD=3.3825;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:54.01:0,54,494	1/1:0,4:4:12.04:138,12,0	0/0:22,0:22:37.33:0,37,347	0/0:14,0:15:26.98:0,27,237	0/0:28,1:29:49.42:0,49,701	0/0:23,0:23:60.02:0,60,546	0/0:17,0:17:35.98:0,36,324	0/0:30,0:30:68.99:0,69,625	0/0:21,0:21:56.98:0,57,507	0/0:25,0:25:75.04:0,75,686	0/0:19,0:19:54.03:0,54,494	0/0:11,0:11:33.02:0,33,302	0/0:15,0:15:36.01:0,36,326	0/0:8,0:8:24.01:0,24,220	0/0:28,0:29:77.05:0,77,686	0/0:10,0:10:27.01:0,27,247	0/0:14,0:14:36.02:0,36,329	0/0:18,0:18:45.01:0,45,412	0/0:23,0:23:63.03:0,63,577	0/0:24,0:24:69.02:0,69,625	0/0:15,0:15:39.01:0,39,357	0/0:13,0:13:36.01:0,36,325	0/0:24,0:24:63.02:0,63,574	0/0:19,0:19:48.02:0,48,439	0/0:14,0:14:30:0,30,270	0/0:18,0:18:51.02:0,51,463	0/0:24,0:24:63:0,63,567	0/0:8,0:8:24.01:0,24,219
chr10	35023752	.	TA	T	8658.28	PASS	AB=0.629;AC=44;AF=0.786;AN=56;BaseQRankSum=6.567;DP=532;FS=1.501;HRun=11;HaplotypeScore=55.0572;InbreedingCoeff=0.7854;MQ=66.76;MQ0=0;MQRankSum=-0.160;QD=19.90;ReadPosRankSum=-0.173;VQSLOD=5.7089;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,26:29:65.92:542,66,0	1/1:0,4:4:8.98:74,9,0	0/0:12,0:11:14.91:0,15,165	0/0:6,0:6:11.94:0,12,107	0/0:33,0:33:87.09:0,87,897	1/1:5,19:24:53.93:443,54,0	1/1:2,12:15:35:277,35,0	1/1:4,26:30:77.67:622,78,0	0/0:23,0:23:51.12:0,51,537	1/1:2,32:34:95.86:784,96,0	1/1:0,21:21:59.93:493,60,0	0/1:5,6:11:11.02:127,0,11	1/1:0,19:20:52.98:425,53,0	1/1:0,10:10:23.97:197,24,0	1/1:1,22:23:62.93:517,63,0	0/1:4,7:11:8.02:148,0,8	0/0:23,0:23:63.15:0,63,668	1/1:2,13:15:38.95:320,39,0	1/1:1,25:26:74.29:575,74,0	1/1:4,20:24:59.76:474,60,0	1/1:2,11:13:29.96:246,30,0	1/1:2,14:16:35.91:290,36,0	1/1:2,19:21:53.90:437,54,0	1/1:4,17:21:47.87:387,48,0	1/1:2,15:17:35.95:295,36,0	1/1:4,14:18:41.93:345,42,0	1/1:3,18:21:44.94:369,45,0	1/1:0,11:11:32.96:271,33,0
chr10	35024634	.	CG	C	2156.71	PASS	AB=0.964;AC=14;AF=0.259;AN=54;BaseQRankSum=-4.382;DP=324;FS=30.497;HRun=10;HaplotypeScore=76.2887;InbreedingCoeff=0.6188;MQ=73.98;MQ0=1;MQRankSum=0.473;QD=16.85;ReadPosRankSum=8.179;VQSLOD=2.0781;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,1:33:27.84:0,28,372	0/0:7,0:7:11.98:0,12,99	0/1:12,1:12:8.01:8,0,143	0/0:12,0:11:23.28:0,23,238	1/1:5,19:24:50.96:443,51,0	0/0:11,0:11:20.78:0,21,122	0/0:11,0:17:8.23:0,8,49	0/0:9,0:9:5.72:0,6,30	1/1:0,10:10:29.99:260,30,0	./.	0/0:8,0:8:8.64:0,9,46	1/1:2,5:7:14.99:130,15,0	0/0:5,0:5:2.90:0,3,16	0/0:10,0:10:14.33:0,14,83	0/0:2,0:2:5.75:0,6,29	0/1:7,0:7:8.18:8,0,49	1/1:3,36:39:99:938,108,0	0/0:13,0:13:24:0,24,130	0/0:6,0:8:8.71:0,9,52	0/0:5,0:5:2.84:0,3,14	0/0:6,0:6:4.50:0,4,21	0/0:13,0:13:2.99:0,3,25	1/1:1,12:13:23.85:208,24,0	1/1:2,13:15:38.99:338,39,0	0/0:5,0:5:8.75:0,9,52	0/0:14,0:14:20.58:0,21,132	0/0:9,0:9:14.45:0,14,82	0/0:5,0:5:0.89:0,1,2
chr10	35025085	.	A	AT	2510.01	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=-2.074;DP=363;FS=0.491;HRun=6;HaplotypeScore=73.8178;InbreedingCoeff=0.8124;MQ=78.91;MQ0=0;MQRankSum=-5.892;QD=29.88;ReadPosRankSum=-0.287;VQSLOD=3.9963;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,32:34:96.31:1208,96,0	0/0:4,0:4:9.02:0,9,92	0/0:14,0:13:29.83:0,30,281	0/1:9,0:7:9.27:9,0,115	1/1:2,13:15:45.14:564,45,0	0/0:15,0:15:42.10:0,42,428	0/0:7,0:7:18.04:0,18,184	0/0:25,0:25:69.11:0,69,686	1/1:5,6:11:32.96:364,33,0	0/0:22,0:22:57.13:0,57,581	0/0:16,0:16:42.08:0,42,422	0/0:9,0:9:21.04:0,21,214	0/0:9,0:9:11.98:0,12,122	0/0:7,0:7:18.02:0,18,175	0/0:9,0:9:21.04:0,21,214	0/0:9,0:9:15.03:0,15,153	1/1:1,14:14:42.13:528,42,0	0/0:13,0:12:30.04:0,30,296	0/0:19,0:19:48.09:0,48,483	0/0:10,0:10:30.07:0,30,306	0/0:2,0:2:6.01:0,6,61	0/0:10,0:10:30.07:0,30,306	0/0:10,0:10:27.04:0,27,267	0/0:4,0:4:9.02:0,9,92	0/0:17,0:17:33.06:0,33,337	0/0:10,0:10:18.03:0,18,184	0/0:18,0:18:39.05:0,39,383	0/0:20,0:20:60.14:0,60,612
chr10	35025097	.	C	CA	9856.17	PASS	AB=1.000;AC=47;AF=0.839;AN=56;BaseQRankSum=-9.571;DP=360;FS=1.390;HRun=3;HaplotypeScore=54.2912;InbreedingCoeff=0.5799;MQ=82.33;MQ0=0;MQRankSum=-2.555;QD=29.78;ReadPosRankSum=0.498;VQSLOD=4.2071;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:34,0:34:16.99:17,0,66	0/0:3,0:3:3.18:0,3,16	0/0:16,0:15:27.61:0,28,272	0/0:10,0:8:12.33:0,12,111	1/1:2,13:15:44.88:529,45,0	1/1:0,16:16:45.15:629,45,0	1/1:0,9:9:21.07:294,21,0	1/1:1,24:25:72.19:937,72,0	1/1:2,8:10:24.08:333,24,0	1/1:1,21:22:63.14:785,63,0	1/1:2,17:19:45.15:629,45,0	0/1:7,0:7:11.64:35,0,12	1/1:0,7:7:12.04:168,12,0	1/1:0,6:6:15.05:210,15,0	1/1:0,9:9:24.08:336,24,0	1/1:0,8:8:12.04:168,12,0	1/1:1,15:15:42.14:574,42,0	1/1:1,11:11:27.09:378,27,0	1/1:1,19:20:56.64:708,57,0	1/1:0,14:14:36.12:498,36,0	1/1:0,1:1:3.01:42,3,0	1/1:0,9:9:24.08:336,24,0	1/1:9,0:9:16.01:66,16,0	0/1:4,0:4:0.15:0,0,38	1/1:0,13:13:36.12:503,36,0	1/1:1,9:10:24.06:301,24,0	1/1:0,16:16:38.80:545,39,0	1/1:0,20:20:60.20:839,60,0
chr10	35025100	.	A	AT	4014.45	PASS	AB=0.979;AC=46;AF=0.821;AN=56;BaseQRankSum=-6.480;DP=357;FS=3.417;HRun=8;HaplotypeScore=72.4304;InbreedingCoeff=0.4883;MQ=83.44;MQ0=0;MQRankSum=-2.037;QD=13.16;ReadPosRankSum=2.829;VQSLOD=3.4966;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:90.03:0,90,818	0/0:3,0:3:9:0,9,79	0/0:16,0:15:21.52:0,22,168	0/1:10,1:9:0.57:1,0,65	1/1:16,0:16:10.93:218,11,0	1/1:16,0:16:43.61:244,44,0	1/1:9,0:9:20.44:118,20,0	1/1:24,0:24:58.09:296,58,0	0/1:10,0:10:10.95:133,0,11	1/1:21,0:21:45.94:256,46,0	1/1:18,0:18:24.12:217,24,0	1/1:1,5:6:12.04:138,12,0	1/1:6,0:6:11.65:66,12,0	0/1:7,0:7:4.77:65,0,5	1/1:11,0:11:3.72:101,4,0	1/1:7,0:7:11.61:65,12,0	1/1:16,0:15:41.81:323,42,0	1/1:11,0:10:26.14:146,26,0	0/1:20,0:20:18.37:159,0,18	1/1:14,0:14:17.86:183,18,0	1/1:1,0:1:2.88:15,3,0	1/1:8,0:8:23.40:136,23,0	1/1:1,9:10:26.87:290,27,0	1/1:2,2:4:3.01:35,3,0	1/1:13,0:13:34.83:194,35,0	1/1:9,0:9:13.42:70,13,0	1/1:17,0:17:17.65:202,18,0	1/1:20,0:20:58.57:345,59,0
chr10	35025327	.	GGT	G	268.95	PASS	AB=0.692;AC=5;AF=0.089;AN=56;BaseQRankSum=3.239;DP=396;FS=0.000;HRun=0;HaplotypeScore=88.4191;InbreedingCoeff=0.6457;MQ=66.12;MQ0=2;MQRankSum=0.921;QD=6.40;ReadPosRankSum=0.839;VQSLOD=2.6587;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:33.77:0,34,370	0/0:4,0:4:12.02:0,12,181	0/0:21,0:12:20.75:0,21,366	0/0:15,0:9:9.06:0,9,245	0/0:15,0:15:36.01:0,36,597	0/0:19,0:18:44.98:0,45,565	0/0:18,0:18:45.09:0,45,677	0/0:29,0:29:87.29:0,87,1480	0/0:16,0:16:48.11:0,48,773	0/0:6,0:6:18.05:0,18,283	0/0:9,0:9:9:0,9,148	1/1:14,3:17:17.47:166,17,0	0/0:9,0:9:19.11:0,19,285	0/0:13,0:13:26.92:0,27,409	0/0:12,0:12:36:0,36,485	0/0:7,0:7:14.93:0,15,136	0/0:14,0:14:11.59:0,12,590	0/0:13,0:13:32.51:0,33,431	0/0:14,0:14:41.94:0,42,607	0/0:12,0:12:26.99:0,27,318	0/0:42,0:41:96.04:0,96,1359	0/0:8,0:8:12.34:0,12,168	0/1:5,4:9:41.01:52,0,41	1/1:13,3:16:19.63:177,20,0	0/0:17,0:17:38.74:0,39,533	0/0:13,0:13:38.32:0,38,550	0/0:13,0:13:32.91:0,33,436	0/0:1,0:1:3.01:0,3,48
chr10	35025329	.	TACACACACAC	T	2847.42	PASS	AB=0.865;AC=30;AF=0.625;AN=48;BaseQRankSum=0.445;DP=405;FS=0.000;HRun=0;HaplotypeScore=132.8663;InbreedingCoeff=0.5932;MQ=64.17;MQ0=5;MQRankSum=-5.342;QD=11.48;ReadPosRankSum=0.604;VQSLOD=1.7593;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:12,0:14:3.01:70,3,0	0/0:4,0:4:9.03:0,9,373	./.	./.	0/0:15,0:15:14.69:0,15,632	1/1:14,6:20:14.92:352,15,0	1/1:14,4:18:3.01:89,3,0	1/1:26,0:26:13.42:124,13,0	0/0:17,0:17:24.08:0,24,970	1/1:5,0:6:6.02:102,6,0	./.	0/0:15,0:15:21.07:0,21,594	1/1:6,3:9:12.03:307,12,0	1/1:9,3:12:3.01:89,3,0	1/1:8,4:13:9.50:248,10,0	1/1:1,5:7:12.04:337,12,0	0/0:18,0:19:33.36:0,33,1120	0/1:10,3:13:99:166,0,187	0/0:15,0:15:1.25:0,1,3	1/1:9,5:14:9.03:246,9,0	1/1:46,0:42:15.29:216,15,0	1/1:7,1:8:3.01:86,3,0	0/0:10,0:10:12.04:0,12,414	0/0:17,0:17:27.09:0,27,713	1/1:15,0:17:12.04:239,12,0	0/1:10,1:11:38.62:83,0,39	1/1:10,3:13:9.03:267,9,0	./.
chr10	35025492	.	TG	T	10163.72	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=5.449;DP=539;FS=13.542;HRun=9;HaplotypeScore=57.8404;InbreedingCoeff=0.9787;MQ=73.30;MQ0=1;MQRankSum=-1.715;QD=22.05;ReadPosRankSum=0.979;VQSLOD=4.5214;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,23:26:42.02:384,42,0	1/1:2,9:11:27.01:247,27,0	0/0:16,0:16:10.73:0,11,282	0/0:9,0:10:15.01:0,15,155	1/1:3,23:26:59.95:539,60,0	1/1:1,19:20:45.02:412,45,0	1/1:2,18:20:54.02:494,54,0	1/1:5,29:34:84.04:769,84,0	1/1:6,19:25:51.02:467,51,0	1/1:1,28:29:84.05:767,84,0	1/1:2,17:19:48.02:439,48,0	0/0:14,0:14:42.11:0,42,475	1/1:0,14:14:39.02:357,39,0	1/1:1,12:13:30.02:274,30,0	1/1:3,17:20:48.02:439,48,0	1/1:0,13:13:33.02:302,33,0	1/1:0,29:29:72.04:659,72,0	1/1:1,20:21:57.03:522,57,0	1/1:6,10:16:30.47:269,30,0	1/1:1,26:27:69.03:632,69,0	1/1:1,21:22:60.03:549,60,0	1/1:1,14:15:39.02:357,39,0	0/0:17,0:17:48.13:0,48,544	0/0:21,0:19:57.14:0,57,639	1/1:2,6:8:15.01:137,15,0	1/1:7,18:25:54.01:490,54,0	1/1:0,20:20:57.03:522,57,0	1/1:0,8:8:15.01:137,15,0
chr10	35025870	.	A	AT	952.64	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-3.603;DP=422;FS=2.233;HRun=9;HaplotypeScore=50.0049;InbreedingCoeff=0.9617;MQ=75.79;MQ0=2;MQRankSum=0.809;QD=22.15;ReadPosRankSum=1.567;VQSLOD=4.4852;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:28:44.08:0,44,507	0/0:12,0:12:35.96:0,36,306	0/0:30,0:23:11.45:0,11,254	0/0:17,0:13:15.84:0,16,141	0/0:13,0:13:26.97:0,27,231	0/0:8,0:8:14.98:0,15,130	0/0:12,0:12:26.95:0,27,229	0/0:16,0:16:29.99:0,30,260	0/0:11,0:11:26.98:0,27,232	0/0:25,0:25:59.96:0,60,516	0/0:15,0:15:41.99:0,42,365	1/1:2,15:17:36.10:398,36,0	0/0:14,0:14:32.97:0,33,286	0/0:10,0:10:17.97:0,18,153	0/0:15,0:15:38.97:0,39,335	0/0:11,0:11:29.99:0,30,260	0/0:22,0:22:53.94:0,54,463	0/0:19,0:19:47.98:0,48,417	0/0:17,0:17:38.94:0,39,339	0/0:23,0:23:56.93:0,57,488	0/0:8,0:8:17.96:0,18,151	0/0:10,0:10:26.98:0,27,231	1/1:2,11:13:27.07:299,27,0	1/1:0,13:13:36.10:398,36,0	0/0:10,0:10:20.97:0,21,179	0/0:10,0:10:23.98:0,24,208	0/0:15,0:15:41.95:0,42,357	0/0:8,0:8:14.93:0,15,122
chr10	35026869	.	GGCGA	G	20260.32	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=8.212;DP=639;FS=0.618;HRun=0;HaplotypeScore=133.8273;InbreedingCoeff=0.9994;MQ=78.76;MQ0=0;MQRankSum=-10.037;QD=52.22;ReadPosRankSum=0.917;VQSLOD=5.9997;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,129,3443	0/0:13,0:13:39.13:0,39,1091	0/0:21,0:21:60.16:0,60,1526	0/0:20,0:20:57.19:0,57,1455	0/0:12,0:12:36.12:0,36,1006	1/1:0,14:14:42.14:839,42,0	1/1:1,29:30:78.27:1551,78,0	1/1:0,17:17:51.16:964,51,0	0/0:34,1:35:45.43:0,45,2655	1/1:1,23:24:69.24:1378,69,0	1/1:1,9:10:27.09:537,27,0	0/0:23,0:23:69.24:0,69,1924	1/1:1,21:22:60.21:1197,60,0	1/1:0,31:31:84.29:1677,84,0	1/1:1,18:19:45.15:899,45,0	1/1:0,18:18:51.18:1018,51,0	0/0:29,0:29:87.30:0,87,2422	1/1:2,25:27:66.23:1318,66,0	1/1:0,17:17:51.16:984,51,0	1/1:1,20:21:54.66:1071,55,0	1/1:2,59:61:99:2756,138,0	1/1:1,14:15:36.12:719,36,0	0/0:14,0:14:42.14:0,42,1172	0/0:41,0:41:99:0,117,3189	1/1:2,22:24:60.21:1198,60,0	1/1:0,17:17:51.18:1018,51,0	1/1:0,13:13:33.11:657,33,0	1/1:0,8:8:24.08:479,24,0
chr10	35028338	.	GGTTA	G	661.30	PASS	AB=0.984;AC=18;AF=0.321;AN=56;BaseQRankSum=1.703;DP=529;FS=11.334;HRun=0;HaplotypeScore=109.3686;InbreedingCoeff=-0.4327;MQ=30.85;MQ0=23;MQRankSum=-1.762;QD=1.93;ReadPosRankSum=-4.179;VQSLOD=0.0087;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:11,0:11:3.03:3,0,154	0/0:5,0:4:2.29:0,2,29	0/0:36,0:16:25.01:0,25,249	0/0:26,0:14:25.45:0,25,196	0/0:5,0:4:2.92:0,3,17	0/1:16,0:11:38.20:39,0,38	0/1:35,0:26:77.03:77,0,113	0/1:10,7:14:95.81:96,0,110	0/0:14,0:13:23.93:0,24,354	0/0:17,0:12:19.39:0,19,138	0/1:13,0:12:9.15:9,0,57	0/0:20,0:19:39.75:0,40,369	0/1:14,0:11:6.02:78,0,6	0/1:12,0:10:19.20:19,0,58	0/1:16,0:10:7.16:7,0,42	0/1:18,0:13:35.92:87,0,36	0/1:17,0:14:6.61:7,0,270	0/1:15,0:15:19.13:19,0,74	0/1:19,0:10:38.41:97,0,38	0/1:21,0:19:30.89:31,0,118	0/1:61,0:55:99:161,0,595	0/0:22,0:14:6.76:0,7,91	0/0:6,0:5:11.49:0,11,69	0/0:36,0:35:66.20:0,66,521	0/1:14,0:10:9.21:9,0,115	0/1:23,0:22:5.67:6,0,139	0/1:16,0:14:42.06:57,0,42	0/1:4,0:4:9.06:9,0,14
chr10	35028394	.	GGATC	G	2023.05	PASS	AB=0.874;AC=27;AF=0.482;AN=56;BaseQRankSum=0.581;DP=561;FS=35.496;HRun=0;HaplotypeScore=137.6641;InbreedingCoeff=-0.1259;MQ=33.93;MQ0=47;MQRankSum=-1.137;QD=5.62;ReadPosRankSum=1.231;VQSLOD=1.0170;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:29:25.58:0,26,576	0/1:11,0:8:36.64:37,0,48	0/0:13,0:5:10.19:0,10,161	0/0:10,0:3:9.02:0,9,104	1/1:2,27:25:3.01:52,3,0	0/1:13,1:9:90.92:111,0,91	0/0:35,0:23:21.35:0,21,263	0/1:34,0:12:47.07:47,0,276	0/1:17,0:16:7.01:7,0,256	0/1:5,22:22:17.97:240,0,18	0/1:2,18:20:25.80:76,0,26	0/1:23,0:23:99:202,0,182	1/1:9,0:7:5.35:88,5,0	0/1:9,0:7:23.81:24,0,56	0/1:14,3:8:28.82:44,0,29	0/1:13,1:10:42.64:43,0,349	0/0:28,0:24:32.47:0,32,555	0/1:26,0:25:20.64:21,0,787	1/1:16,5:6:12.03:159,12,0	0/1:14,3:16:7.23:114,0,7	0/0:52,0:38:56.76:0,57,1067	1/1:9,4:10:5.51:54,6,0	1/1:2,0:1:3.01:35,3,0	0/0:32,0:30:8.79:0,9,139	0/1:9,1:6:0.41:77,0,0	0/1:7,27:33:99:508,0,151	1/1:3,2:5:12.03:175,12,0	0/1:8,0:6:71.91:80,0,72
chr10	35028452	.	ATCAT	A	1057.28	PASS	AB=0.961;AC=28;AF=0.500;AN=56;BaseQRankSum=4.443;DP=442;FS=11.730;HRun=0;HaplotypeScore=114.8027;InbreedingCoeff=-0.1463;MQ=33.84;MQ0=27;MQRankSum=-6.229;QD=3.54;ReadPosRankSum=3.396;VQSLOD=1.4005;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:16:35.52:0,36,415	1/1:2,2:3:6.02:97,6,0	0/0:40,1:8:19.17:0,19,337	0/1:32,0:8:15.75:16,0,273	1/1:8,3:10:4.26:45,4,0	0/1:9,0:8:51.95:73,0,52	0/1:17,0:12:15.49:15,0,104	0/1:14,0:6:13.72:14,0,52	0/0:13,1:13:22.81:0,23,214	0/1:14,1:12:44.63:49,0,45	1/1:3,1:4:1.72:4,2,0	0/0:24,0:24:62.02:0,62,1338	1/1:10,1:10:8.66:134,9,0	0/1:10,1:11:57.44:62,0,57	0/1:13,0:10:20.40:30,0,20	0/1:16,1:13:91.55:92,0,101	0/1:20,1:20:18.35:18,0,270	0/1:23,0:22:31.85:32,0,341	0/1:8,0:4:1.31:1,0,38	1/1:10,1:10:13.29:97,13,0	0/1:43,2:35:99:180,0,481	0/1:10,1:8:11.24:105,0,11	0/0:6,0:6:18.06:0,18,423	0/0:39,0:39:71.78:0,72,1649	0/1:4,2:5:8.95:52,0,9	0/1:7,0:6:4.42:4,0,47	1/1:4,1:4:6.02:98,6,0	0/1:4,0:3:4.25:4,0,35
chr10	35028454	.	CATTG	C	782.32	PASS	AB=0.910;AC=22;AF=0.393;AN=56;BaseQRankSum=2.481;DP=440;FS=36.335;HRun=0;HaplotypeScore=116.7706;InbreedingCoeff=-0.3346;MQ=33.91;MQ0=28;MQRankSum=-3.189;QD=3.21;ReadPosRankSum=2.288;VQSLOD=0.3637;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:17:29.80:0,30,183	1/1:4,0:3:6.01:61,6,0	0/0:40,0:8:14.54:0,15,317	0/0:33,0:8:1.07:0,1,228	0/1:10,0:9:13.44:13,0,36	0/1:8,1:8:19.22:69,0,19	0/1:16,0:11:26.37:54,0,26	0/0:14,0:6:0.46:0,0,58	0/0:14,0:13:7.19:0,7,81	0/1:10,3:10:50.46:50,0,173	0/1:3,1:4:11.06:11,0,11	0/0:25,0:25:68.82:0,69,1451	1/1:8,3:10:1.14:143,1,0	0/1:9,2:11:46.52:47,0,93	0/1:10,2:9:21.53:22,0,22	0/1:10,5:12:51.14:108,0,51	0/1:22,0:21:20.89:21,0,88	0/1:13,10:22:31.32:31,0,177	0/1:8,0:4:19.93:20,0,36	0/1:10,1:10:43.70:44,0,51	0/1:45,0:36:82.66:83,0,254	0/1:12,0:9:48.92:49,0,63	0/0:6,0:6:17.99:0,18,415	0/0:39,0:39:77.32:0,77,1741	0/1:6,0:5:27.97:34,0,28	0/1:6,0:5:20.98:24,0,21	1/1:4,1:4:5.97:57,6,0	0/0:4,0:3:5.02:0,5,28
chr10	35028455	.	ATTGG	A	1021.45	PASS	AB=0.935;AC=29;AF=0.558;AN=52;BaseQRankSum=3.605;DP=464;FS=6.651;HRun=0;HaplotypeScore=120.4989;InbreedingCoeff=0.0008;MQ=33.55;MQ0=30;MQRankSum=-1.866;QD=3.52;ReadPosRankSum=2.822;VQSLOD=1.8715;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:16:2.27:38,2,0	1/1:4,0:3:6.02:97,6,0	0/0:42,0:8:9.50:0,10,219	0/0:36,0:9:0.66:0,1,151	1/1:10,0:9:4.56:41,5,0	1/1:8,2:8:9.01:121,9,0	0/1:20,1:16:53.17:53,0,78	0/0:15,0:6:9:0,9,104	0/1:15,0:14:16.90:45,0,17	0/1:15,0:12:28.77:29,0,122	./.	0/0:26,0:26:60.15:0,60,1340	1/1:10,2:11:10.75:142,11,0	0/1:10,1:11:22.01:22,0,72	0/1:14,1:11:37.60:38,0,59	1/1:15,0:12:1.82:61,2,0	1/1:21,1:21:19.92:163,20,0	0/1:23,0:22:12.50:54,0,12	0/1:6,2:4:0.27:44,0,0	1/1:12,0:10:12.53:82,13,0	0/1:48,1:38:44.81:45,0,98	0/1:12,0:9:31.82:32,0,49	0/0:7,0:7:18.06:0,18,414	0/0:40,0:40:63.22:0,63,1471	0/1:6,0:5:14.37:14,0,45	0/1:4,3:6:42.91:43,0,49	1/1:5,0:4:3.45:22,3,0	./.
chr10	35028489	.	G	GGGTT	1711.94	PASS	AB=0.994;AC=23;AF=0.411;AN=56;BaseQRankSum=6.762;DP=551;FS=15.302;HRun=0;HaplotypeScore=132.8667;InbreedingCoeff=-0.0841;MQ=46.07;MQ0=18;MQRankSum=-4.214;QD=5.52;ReadPosRankSum=2.121;VQSLOD=1.9061;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:9,2:11:18.06:405,18,0	0/0:4,0:4:8:0,8,53	0/0:48,0:23:32.68:0,33,357	0/0:37,0:19:16.04:0,16,433	0/0:7,0:7:6.47:0,6,56	0/0:9,0:5:0.72:0,1,47	0/1:28,0:24:46.19:46,0,502	0/1:29,0:15:45.06:45,0,114	1/1:12,1:11:17.29:282,17,0	0/1:14,0:12:84.65:85,0,86	1/1:5,0:4:0.89:2,1,0	0/0:35,0:35:87.19:0,87,1367	0/1:12,0:11:25.62:124,0,26	0/1:16,0:15:69.15:101,0,69	0/1:16,0:11:56.17:72,0,56	0/1:18,0:15:67.13:107,0,67	0/1:21,2:21:4.02:341,0,4	0/1:16,0:14:61.22:61,0,95	0/0:28,0:8:4.93:0,5,105	0/1:14,0:12:26.72:27,0,44	0/1:49,0:39:16.26:16,0,624	0/1:24,0:19:33.09:101,0,33	0/0:10,0:10:24.08:0,24,401	0/0:50,0:50:99:0,107,1707	0/1:8,0:6:13.90:14,0,32	1/1:11,0:9:3.45:23,3,0	0/0:12,0:10:12.01:0,12,172	1/1:3,0:3:5.02:28,5,0
chr10	35028525	.	TGGTG	T	1397.62	PASS	AB=0.834;AC=16;AF=0.286;AN=56;BaseQRankSum=8.648;DP=517;FS=66.435;HRun=0;HaplotypeScore=134.2902;InbreedingCoeff=-0.2435;MQ=45.27;MQ0=11;MQRankSum=-6.918;QD=7.32;ReadPosRankSum=-0.372;VQSLOD=0.3150;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:13:21.07:0,21,501	0/1:2,3:5:68.90:118,0,69	0/0:39,0:27:17.56:0,18,1282	0/0:33,0:25:27.95:0,28,996	1/1:3,5:8:8.98:126,9,0	0/1:7,2:7:82.58:101,0,83	0/0:30,0:27:48.41:0,48,787	0/0:28,0:16:35.50:0,35,877	0/1:13,5:15:99:140,0,328	0/1:12,2:14:99:131,0,332	0/1:2,1:3:45.08:64,0,45	0/0:36,0:36:99:0,99,2456	0/0:10,0:8:7.79:0,8,81	0/1:9,1:10:47.68:48,0,209	0/1:11,0:8:2.74:3,0,170	0/1:12,3:13:99:179,0,374	0/1:18,1:18:27.19:27,0,325	0/0:13,0:10:6.69:0,7,163	0/0:20,0:13:30.53:0,31,667	0/1:16,1:16:20.97:122,0,21	0/0:38,0:30:35.55:0,36,805	0/1:21,5:22:84.95:269,0,85	0/0:11,0:11:33.06:0,33,714	0/0:47,0:47:60.51:0,61,2634	0/1:5,2:7:68.30:100,0,68	0/0:5,0:4:9.03:0,9,243	0/1:10,4:13:81.67:82,0,297	0/1:2,3:5:48.16:48,0,81
chr10	35028527	.	GTGGGTTGT	G	1002.54	PASS	AB=0.956;AC=17;AF=0.304;AN=56;BaseQRankSum=9.852;DP=518;FS=27.987;HRun=0;HaplotypeScore=160.3982;InbreedingCoeff=-0.2622;MQ=45.14;MQ0=12;MQRankSum=-7.076;QD=4.60;ReadPosRankSum=0.946;VQSLOD=0.9268;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:13:21.04:0,21,527	0/1:5,0:5:16.76:17,0,87	0/0:42,0:28:43.57:0,44,1356	0/0:33,0:24:26.26:0,26,1269	1/1:8,0:8:8.89:58,9,0	0/1:10,0:7:42.93:55,0,43	0/0:30,0:26:18.84:0,19,658	0/0:28,0:16:38.13:0,38,1021	0/0:17,0:14:25.88:0,26,331	0/1:13,2:14:95.57:96,0,361	0/1:3,1:3:50.93:133,0,51	0/0:36,0:36:99:0,99,3445	0/1:8,0:7:6.66:7,0,72	0/1:10,0:9:13.14:13,0,215	0/1:12,0:8:90.07:90,0,133	0/1:14,0:13:29.26:29,0,405	0/1:19,0:18:99:125,0,297	0/1:13,0:10:9.05:9,0,135	0/0:20,0:13:4.41:0,4,606	0/1:6,8:16:8.99:139,0,9	0/1:37,0:29:6.74:7,0,587	0/1:26,0:21:56.45:294,0,56	0/0:12,0:12:36.07:0,36,1114	0/0:46,0:46:99:0,110,3887	0/1:11,0:8:62.15:69,0,62	0/0:5,0:4:9.03:0,9,329	0/0:13,1:13:17.61:0,18,350	0/1:6,0:5:21.43:21,0,72
chr10	35028646	.	GCTTC	G	4937.91	PASS	AB=0.800;AC=42;AF=0.808;AN=52;BaseQRankSum=1.288;DP=205;FS=131.975;HRun=0;HaplotypeScore=119.8727;InbreedingCoeff=0.5524;MQ=41.42;MQ0=0;MQRankSum=-2.974;QD=44.09;ReadPosRankSum=1.590;VQSLOD=1.6273;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,7:7:21.07:428,21,0	1/1:1,1:2:6.01:81,6,0	0/1:15,0:9:37.67:38,0,96	0/0:18,0:12:8.83:0,9,291	1/1:0,2:2:6.02:123,6,0	1/1:0,3:3:9.03:184,9,0	1/1:0,4:4:9.03:185,9,0	1/1:5,2:7:20.85:197,21,0	1/1:1,6:7:21.06:396,21,0	1/1:0,3:3:9.03:181,9,0	./.	0/0:32,0:32:75.90:0,76,1254	1/1:0,6:6:18.06:370,18,0	1/1:1,1:2:5.95:80,6,0	1/1:1,5:6:18.05:336,18,0	1/1:0,7:7:18.06:371,18,0	1/1:0,2:2:3.01:62,3,0	1/1:1,3:4:11.97:201,12,0	1/1:0,4:4:12.04:245,12,0	1/1:0,4:4:12.04:239,12,0	1/1:2,7:9:17.90:243,18,0	1/1:0,1:1:3.01:62,3,0	0/0:20,0:19:14.07:0,14,677	0/0:23,0:23:16.82:0,17,733	0/1:2,4:6:16.26:241,0,16	1/1:0,6:6:18.06:368,18,0	1/1:0,5:5:15.05:308,15,0	./.
chr10	35028670	.	GATTA	G	1375.54	PASS	AB=0.972;AC=37;AF=0.712;AN=52;BaseQRankSum=2.524;DP=116;FS=107.827;HRun=0;HaplotypeScore=88.2297;InbreedingCoeff=0.4088;MQ=44.14;MQ0=0;MQRankSum=-1.343;QD=18.59;ReadPosRankSum=-1.815;VQSLOD=-0.6917;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:3,0:3:7.82:14,0,8	0/0:1,0:1:2.80:0,3,13	0/1:5,0:5:22.39:22,0,59	0/0:5,1:4:8.83:0,9,87	1/1:1,0:1:2.94:18,3,0	1/1:2,2:3:9.01:143,9,0	1/1:3,0:2:5.92:39,6,0	1/1:1,1:2:5.99:79,6,0	0/0:3,0:3:4:0,4,27	1/1:2,0:2:5.92:39,6,0	./.	0/0:16,0:16:11.38:0,11,684	1/1:3,1:4:12.01:150,12,0	1/1:1,0:1:2.99:23,3,0	1/1:4,0:4:8.96:70,9,0	1/1:3,1:4:12:132,12,0	0/0:2,0:2:5.38:0,5,60	1/1:4,0:4:11.99:105,12,0	1/1:3,1:4:12.02:140,12,0	1/1:1,1:2:5.97:74,6,0	1/1:7,0:7:17.43:140,17,0	1/1:3,0:2:5.96:53,6,0	0/1:10,1:10:69.17:69,0,155	0/0:14,0:14:6.97:0,7,394	1/1:3,0:3:5.96:45,6,0	1/1:4,1:5:14.82:126,15,0	1/1:2,0:2:6.01:55,6,0	./.
chr10	35028673	.	T	TG	1343.80	PASS	AB=0.798;AC=29;AF=0.580;AN=50;BaseQRankSum=1.560;DP=100;FS=106.443;HRun=0;HaplotypeScore=76.1990;InbreedingCoeff=0.3246;MQ=52.44;MQ0=0;MQRankSum=1.040;QD=17.68;ReadPosRankSum=-0.436;VQSLOD=-0.0482;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:3,0:3:8.91:0,9,63	0/0:1,0:1:2.99:0,3,24	0/0:4,0:5:11.76:0,12,57	0/0:4,0:4:2.84:0,3,14	./.	1/1:3,1:3:9.03:112,9,0	0/0:2,0:1:2.99:0,3,24	1/1:1,0:1:3.01:38,3,0	0/0:3,0:3:8.97:0,9,69	1/1:0,1:1:3.01:45,3,0	./.	0/1:14,1:15:3.39:3,0,233	1/1:1,3:4:12.04:154,12,0	1/1:0,1:1:3.01:43,3,0	1/1:0,2:2:6.02:85,6,0	1/1:1,3:4:12.04:161,12,0	0/0:2,0:2:5.95:0,6,42	1/1:0,3:3:9.03:128,9,0	1/1:1,3:4:12.04:168,12,0	1/1:1,0:1:3.01:36,3,0	0/1:3,4:7:1.74:154,0,2	0/0:2,0:1:2.99:0,3,24	0/1:7,1:7:51.01:71,0,51	0/1:12,1:13:14.75:15,0,152	1/1:0,1:1:3.01:43,3,0	1/1:1,3:4:12.04:171,12,0	0/1:1,2:3:7.51:75,0,8	./.
chr10	35028683	.	GT	G	110.17	PASS	AB=0.833;AC=12;AF=0.400;AN=30;BaseQRankSum=2.981;DP=42;FS=33.185;HRun=2;HaplotypeScore=63.5849;InbreedingCoeff=0.2147;MQ=61.68;MQ0=0;MQRankSum=0.170;QD=9.18;ReadPosRankSum=0.170;VQSLOD=-0.5369;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,0:1:1.55:4,2,0	1/1:0,1:1:3.01:39,3,0	0/0:1,0:1:3.01:0,3,41	0/0:2,0:1:3.01:0,3,33	./.	1/1:1,1:1:3.01:39,3,0	0/0:2,0:1:3:0,3,26	./.	1/1:1,1:2:3:39,3,0	./.	./.	0/0:12,0:12:32.97:0,33,298	./.	./.	./.	./.	0/1:1,1:2:18.19:33,0,18	./.	./.	./.	0/0:1,0:1:2.99:0,3,23	0/0:2,0:1:2.90:0,3,16	0/1:3,0:3:25.94:26,0,33	0/0:9,0:9:19.25:0,19,197	./.	1/1:0,1:1:3.01:37,3,0	0/0:1,0:1:2.98:0,3,22	./.
chr10	35028685	.	T	TG	729	PASS	AC=26;AF=0.867;AN=30;BaseQRankSum=1.204;DP=42;FS=0.000;HRun=1;HaplotypeScore=60.8882;InbreedingCoeff=0.2523;MQ=61.68;MQ0=0;MQRankSum=-0.810;QD=18.69;ReadPosRankSum=2.473;VQSLOD=3.8863;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,1:1:3.01:34,3,0	1/1:1,0:1:2.60:10,3,0	0/0:1,0:1:3.01:0,3,34	0/0:2,0:1:3.01:0,3,39	./.	1/1:2,0:1:2.68:11,3,0	1/1:0,2:1:3.01:34,3,0	./.	1/1:2,0:2:5.27:21,5,0	./.	./.	1/1:4,8:12:26.37:322,26,0	./.	./.	./.	./.	1/1:1,1:2:5.61:47,6,0	./.	./.	./.	1/1:0,1:1:3.01:37,3,0	1/1:1,1:1:3.01:45,3,0	1/1:1,2:3:7.84:85,8,0	1/1:2,7:9:4.18:134,4,0	./.	1/1:1,0:1:1.55:4,2,0	1/1:0,1:1:3.01:38,3,0	./.
chr10	35028692	.	T	TTG	244.16	PASS	AB=0.917;AC=21;AF=0.618;AN=34;BaseQRankSum=-0.805;DP=47;FS=12.503;HRun=0;HaplotypeScore=68.0512;InbreedingCoeff=0.3005;MQ=69.58;MQ0=0;MQRankSum=-0.936;QD=6.60;ReadPosRankSum=2.111;VQSLOD=1.9740;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:1,0:1:0:0,0,0	1/1:0,1:1:3.01:60,3,0	0/0:1,0:1:2.98:0,3,22	0/0:2,0:2:2.85:0,3,48	./.	1/1:1,1:2:3.01:60,3,0	0/1:2,0:1:0:0,0,0	./.	1/1:0,1:1:3.01:60,3,0	./.	./.	1/1:10,0:10:5.04:29,5,0	./.	./.	0/0:2,0:2:5.99:0,6,58	./.	1/1:1,1:2:4.83:65,5,0	./.	./.	./.	1/1:2,0:2:1.82:5,2,0	0/0:2,0:1:3.01:0,3,39	1/1:2,0:3:2.02:18,2,0	1/1:9,0:9:7.01:19,7,0	0/0:1,0:1:3.01:0,3,36	0/1:2,1:3:10.41:30,0,10	1/1:1,0:1:1.55:4,2,0	./.
chr10	35028716	.	G	GTT	623.03	PASS	AC=20;AF=0.833;AN=24;BaseQRankSum=2.627;DP=26;FS=2.629;HRun=0;HaplotypeScore=56.1001;InbreedingCoeff=0.3143;MQ=102.83;MQ0=0;MQRankSum=-2.739;QD=29.67;ReadPosRankSum=2.292;VQSLOD=4.6238;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,1:1:3.01:40,3,0	./.	0/0:1,0:1:3.01:0,3,31	0/0:3,0:3:5.64:0,6,58	./.	1/1:0,1:1:3.01:47,3,0	./.	./.	./.	./.	1/1:0,1:1:3.01:32,3,0	1/1:0,3:3:6.02:93,6,0	./.	1/1:0,2:2:6.02:88,6,0	1/1:0,2:2:6.02:88,6,0	./.	./.	./.	./.	./.	./.	./.	./.	1/1:0,6:6:6.02:88,6,0	1/1:0,1:1:3.01:47,3,0	1/1:0,2:2:6.02:102,6,0	1/1:0,2:2:6.02:92,6,0	./.
chr10	35028718	.	CGAGT	C	427.45	PASS	AC=20;AF=0.833;AN=24;BaseQRankSum=2.627;DP=26;FS=2.772;HRun=0;HaplotypeScore=59.1847;InbreedingCoeff=0.3082;MQ=102.83;MQ0=0;MQRankSum=-2.739;QD=20.35;ReadPosRankSum=2.627;VQSLOD=2.8213;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,1:1:3.01:35,3,0	./.	0/0:0,0:1:3.01:0,3,40	0/0:3,0:3:5.85:0,6,94	./.	1/1:0,1:1:3.01:42,3,0	./.	./.	./.	./.	1/1:0,1:1:3.01:33,3,0	1/1:3,0:3:4.87:17,5,0	./.	1/1:0,2:2:6.02:88,6,0	1/1:0,2:2:6.02:88,6,0	./.	./.	./.	./.	./.	./.	./.	./.	1/1:6,0:6:2.92:9,3,0	1/1:0,1:1:3.01:43,3,0	1/1:0,2:2:6.02:83,6,0	1/1:0,2:2:6.02:83,6,0	./.
chr10	35028730	.	CAT	C	453.13	PASS	AC=22;AF=0.846;AN=26;BaseQRankSum=1.531;DP=28;FS=3.854;HRun=0;HaplotypeScore=54.6547;InbreedingCoeff=0.2532;MQ=87.20;MQ0=0;MQRankSum=-1.735;QD=18.88;ReadPosRankSum=1.123;VQSLOD=3.1315;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,1:1:3:28,3,0	./.	0/0:1,0:1:3.01:0,3,41	0/0:2,0:2:0:0,0,0	./.	1/1:0,1:1:3.01:34,3,0	./.	./.	./.	./.	1/1:1,1:2:3.48:31,3,0	1/1:1,3:4:5.89:65,6,0	1/1:1,0:1:0.47:1,0,0	1/1:0,2:2:6.02:68,6,0	1/1:0,2:2:6.02:68,6,0	./.	./.	./.	./.	./.	./.	./.	./.	1/1:0,6:6:6.01:61,6,0	1/1:0,1:1:3.01:34,3,0	1/1:0,2:2:6.02:76,6,0	1/1:0,2:2:6.02:71,6,0	./.
chr10	35030551	.	CA	C	5659.02	PASS	AB=0.834;AC=47;AF=0.839;AN=56;BaseQRankSum=-4.393;DP=488;FS=4.685;HRun=12;HaplotypeScore=97.8841;InbreedingCoeff=0.3819;MQ=62.93;MQ0=3;MQRankSum=0.619;QD=12.44;ReadPosRankSum=4.266;VQSLOD=4.9273;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,15:24:42.80:392,43,0	1/1:0,2:2:5.98:45,6,0	0/1:37,3:19:31.82:32,0,147	0/1:46,2:17:20.96:21,0,135	1/1:9,19:28:14.45:340,14,0	1/1:5,13:18:49.60:366,50,0	1/1:0,11:11:26.80:195,27,0	1/1:11,9:19:35.56:264,36,0	1/1:4,9:13:35.28:244,35,0	1/1:4,13:17:38.69:284,39,0	1/1:11,16:27:39.09:384,39,0	0/0:6,0:7:4.04:0,4,12	1/1:4,5:9:4.74:108,5,0	1/1:1,7:8:15.76:131,16,0	1/1:7,9:16:35.06:253,35,0	1/1:3,7:11:28.70:209,29,0	0/1:4,7:11:12.56:90,0,13	1/1:8,13:21:33.49:339,33,0	1/1:8,4:11:14.90:114,15,0	1/1:10,20:30:66.08:510,66,0	1/1:8,7:15:12.29:183,12,0	1/1:5,7:13:19.68:137,20,0	0/0:13,0:13:7.93:0,8,70	0/0:12,0:12:1.83:0,2,4	1/1:0,15:15:44.79:336,45,0	1/1:6,14:20:47.76:360,48,0	1/1:10,10:21:37.55:276,38,0	1/1:3,2:5:5.93:45,6,0
chr10	35030563	.	AC	A	5769.63	PASS	AB=0.965;AC=54;AF=0.964;AN=56;BaseQRankSum=1.700;DP=548;FS=14.924;HRun=1;HaplotypeScore=108.6983;InbreedingCoeff=-0.0340;MQ=60.25;MQ0=5;MQRankSum=0.470;QD=10.53;ReadPosRankSum=4.918;VQSLOD=1.5377;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:27:49.24:317,49,0	1/1:3,0:3:8.18:40,8,0	0/1:37,1:14:53.15:53,0,102	0/1:42,2:16:20.70:21,0,157	1/1:32,0:32:46.39:352,46,0	1/1:19,0:19:45.55:240,46,0	1/1:18,0:18:39.58:201,40,0	1/1:24,0:23:42.55:234,43,0	1/1:17,1:18:50.55:276,51,0	1/1:23,0:23:57.75:279,58,0	1/1:26,0:26:58.44:316,58,0	1/1:5,0:5:14.16:99,14,0	1/1:11,0:11:30.02:149,30,0	1/1:12,0:12:32.63:157,33,0	1/1:15,0:15:37.50:195,38,0	1/1:15,0:15:35.50:170,36,0	1/1:17,0:17:27.34:142,27,0	1/1:22,0:22:52.37:292,52,0	1/1:16,0:14:31.89:128,32,0	1/1:34,0:34:85.38:458,85,0	1/1:12,0:12:25.11:139,25,0	1/1:10,0:10:26.09:148,26,0	1/1:16,3:18:47.23:399,47,0	1/1:17,0:17:17.41:142,17,0	1/1:19,0:19:52.57:262,53,0	1/1:25,0:25:46.61:251,47,0	1/1:22,0:22:51.26:253,51,0	1/1:5,0:5:13.16:57,13,0
chr10	35030564	.	CA	C	11154.45	PASS	AB=0.974;AC=47;AF=0.839;AN=56;BaseQRankSum=-3.662;DP=545;FS=0.843;HRun=12;HaplotypeScore=89.2592;InbreedingCoeff=0.7444;MQ=59.33;MQ0=5;MQRankSum=1.248;QD=24.20;ReadPosRankSum=2.641;VQSLOD=4.0402;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,16:27:49.25:671,49,0	1/1:1,2:3:9.02:96,9,0	0/1:36,1:13:8.79:9,0,158	0/0:43,0:16:22.66:0,23,262	1/1:5,25:32:72.11:717,72,0	1/1:4,14:18:48.12:505,48,0	1/1:11,8:19:48.09:489,48,0	1/1:4,20:23:56.88:579,57,0	1/1:9,9:18:53.48:537,53,0	1/1:0,23:23:69.13:709,69,0	1/1:2,23:25:60.13:620,60,0	0/0:5,0:5:3.45:0,3,10	1/1:6,5:11:33.04:335,33,0	1/1:5,7:12:36.09:378,36,0	1/1:5,10:15:42.10:441,42,0	1/1:6,8:14:39.09:410,39,0	1/1:1,16:17:27:265,27,0	1/1:4,17:21:51.75:534,52,0	1/1:3,13:14:39.08:407,39,0	1/1:13,21:34:90.19:928,90,0	1/1:3,8:11:24.06:252,24,0	1/1:0,10:10:27.06:277,27,0	0/0:19,0:18:6.26:0,6,60	0/0:17,0:17:3.79:0,4,27	1/1:5,15:20:60.13:624,60,0	1/1:4,21:25:63.02:648,63,0	1/1:12,12:24:54.12:565,54,0	1/1:3,2:5:15.04:159,15,0
chr10	35030810	.	C	CCT	1094.39	PASS	AB=0.933;AC=39;AF=0.813;AN=48;BaseQRankSum=-0.126;DP=100;FS=73.439;HRun=0;HaplotypeScore=15.8769;InbreedingCoeff=0.3920;MQ=78.75;MQ0=6;MQRankSum=0.211;QD=21.05;ReadPosRankSum=-5.144;VQSLOD=0.5302;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,0:5:8.98:91,9,0	./.	0/1:13,0:7:17.72:18,0,226	0/0:17,0:5:15.05:0,15,233	1/1:1,0:1:3.01:50,3,0	1/1:2,1:3:9.03:142,9,0	1/1:1,1:1:3.01:58,3,0	1/1:1,0:1:3:28,3,0	1/1:2,0:2:6.02:87,6,0	1/1:1,0:1:3.01:34,3,0	./.	0/0:11,0:11:30.10:0,30,482	1/1:1,0:1:3.01:50,3,0	1/1:1,0:1:3.01:49,3,0	1/1:1,0:1:3:28,3,0	1/1:1,0:1:3.01:31,3,0	1/1:2,0:1:2.97:20,3,0	./.	1/1:4,0:4:12.01:150,12,0	1/1:1,0:1:3:27,3,0	1/1:0,3:3:3.01:54,3,0	1/1:2,0:2:5.95:50,6,0	0/0:6,0:6:18.06:0,18,294	0/0:11,0:11:33.07:0,33,509	./.	1/1:2,0:2:6.02:106,6,0	1/1:3,0:3:9.03:140,9,0	1/1:2,0:2:3:28,3,0
chr10	35031069	.	CA	C	10749.35	PASS	AB=0.938;AC=47;AF=0.839;AN=56;BaseQRankSum=6.086;DP=547;FS=6.446;HRun=9;HaplotypeScore=90.8773;InbreedingCoeff=0.8698;MQ=64.12;MQ0=2;MQRankSum=-2.241;QD=22.35;ReadPosRankSum=4.093;VQSLOD=5.3831;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,20:25:45.01:412,45,0	1/1:2,11:13:27.01:247,27,0	0/1:14,1:8:16.28:16,0,115	0/0:27,1:17:27.28:0,27,304	1/1:1,36:37:99:905,99,0	1/1:2,23:25:66.03:603,66,0	1/1:2,15:17:42.02:384,42,0	1/1:1,15:16:44.97:400,45,0	1/1:1,14:15:39.02:357,39,0	1/1:4,18:22:54.02:490,54,0	1/1:0,19:19:54.02:493,54,0	0/0:11,0:11:30.09:0,30,341	1/1:1,14:15:39.02:357,39,0	1/1:2,13:15:39.02:357,39,0	1/1:1,18:19:51.03:467,51,0	1/1:2,19:21:57.03:522,57,0	1/1:2,17:19:45.02:412,45,0	1/1:3,12:15:36.02:329,36,0	1/1:4,21:25:60.01:547,60,0	1/1:3,23:26:31.40:541,31,0	1/1:1,15:16:39.01:357,39,0	1/1:0,19:19:57.03:521,57,0	0/0:10,0:10:30.08:0,30,336	0/0:16,0:16:41.79:0,42,461	1/1:2,19:21:51.02:467,51,0	1/1:0,13:13:39.02:357,39,0	1/1:5,35:40:99:933,102,0	1/1:0,13:13:30.02:274,30,0
chr10	35035972	.	TA	T	32.74	PASS	AC=4;AF=0.333;AN=12;BaseQRankSum=0.566;DP=204;FS=3.090;HRun=3;HaplotypeScore=5.4108;MQ=21.92;MQ0=102;MQRankSum=-2.262;QD=2.98;ReadPosRankSum=-1.106;VQSLOD=-0.6816;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:1:3.01:0,3,43	0/0:5,0:1:3.01:0,3,43	0/0:9,0:4:12.04:0,12,173	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	1/1:1,2:1:3.01:37,3,0	./.	./.	./.	./.	./.	./.	./.	./.	0/0:15,0:5:6.02:0,6,86	./.	./.	1/1:5,3:2:6.02:74,6,0	./.	./.
chr10	35036396	.	T	TC	343.80	PASS	AC=14;AF=1.000;AN=14;DP=199;FS=0.000;HRun=0;HaplotypeScore=3.9922;MQ=7.22;MQ0=156;QD=9.55;VQSLOD=2.5307;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	1/1:6,1:1:3.01:37,3,0	1/1:1,3:2:3.01:48,3,0	./.	./.	./.	1/1:4,3:3:9.03:137,9,0	./.	./.	1/1:1,4:1:3.01:48,3,0	1/1:3,2:1:3.01:48,3,0	./.	./.	./.	./.	./.	./.	./.	1/1:3,1:1:3.01:48,3,0	./.	./.	./.	./.	1/1:2,2:1:3.01:48,3,0	./.
chr10	35048111	.	T	TA	5111.63	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=-3.754;DP=273;FS=26.963;HRun=8;HaplotypeScore=61.8386;InbreedingCoeff=0.8048;MQ=53.98;MQ0=21;MQRankSum=0.257;QD=26.49;ReadPosRankSum=-0.009;VQSLOD=3.1140;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:12:27:0,27,245	0/0:6,0:6:18.01:0,18,164	0/0:8,0:1:3:0,3,27	0/0:7,0:4:0.12:0,0,49	0/0:21,0:20:54.01:0,54,490	1/1:0,8:8:21.06:240,21,0	1/1:2,1:2:3.01:35,3,0	1/1:5,8:12:27.08:310,27,0	0/0:7,0:5:15.01:0,15,137	1/1:4,13:17:17.40:423,17,0	1/1:1,11:12:33.10:378,33,0	1/1:1,3:4:9.03:104,9,0	1/1:3,5:6:18.05:207,18,0	1/1:2,3:5:9.03:102,9,0	1/1:1,8:9:15.04:173,15,0	1/1:0,8:8:24.07:277,24,0	0/0:17,1:17:13.32:0,13,360	1/1:2,6:6:18.05:208,18,0	1/1:4,5:8:15.04:172,15,0	1/1:1,12:11:33.10:377,33,0	1/1:3,4:6:11.73:138,12,0	1/1:0,1:1:3.01:35,3,0	1/1:1,13:13:36.11:415,36,0	1/1:0,4:4:12.04:138,12,0	1/1:0,6:6:18.05:208,18,0	1/1:5,10:14:30.09:344,30,0	1/1:0,12:12:27.08:310,27,0	1/1:2,15:17:45.13:519,45,0
chr10	35049004	.	T	TCTCTCTCC	635.36	PASS	AB=0.702;AC=5;AF=0.089;AN=56;BaseQRankSum=-1.780;DP=503;FS=4.990;HRun=0;HaplotypeScore=155.0024;InbreedingCoeff=0.3318;MQ=42.98;MQ0=14;MQRankSum=1.987;QD=5.94;ReadPosRankSum=0.897;VQSLOD=2.5606;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:43,0:42:99:126,0,175	0/0:3,0:3:5.92:0,6,39	0/0:19,0:7:11.80:0,12,90	0/0:27,0:9:17.81:0,18,166	0/0:19,0:18:8.92:0,9,64	0/0:21,0:19:10.35:0,10,90	0/0:18,0:17:20.99:0,21,180	0/0:25,0:25:52.76:0,53,335	0/0:20,0:19:15.40:0,15,118	0/0:21,0:20:38.41:0,38,282	0/0:13,0:13:8.99:0,9,76	0/1:2,10:13:0:0,0,0	0/0:15,0:15:22.90:0,23,165	0/0:17,0:15:26.90:0,27,213	0/0:7,0:6:8.99:0,9,75	0/0:16,0:15:20.94:0,21,170	0/0:16,0:15:16.45:0,16,113	0/0:9,0:7:10.37:0,10,63	0/0:19,0:18:43.46:0,43,278	0/0:13,0:13:4.81:0,5,63	0/0:15,0:14:8.62:0,9,73	0/0:21,0:21:6.88:0,7,52	1/1:23,0:25:40.23:610,40,0	0/1:6,19:26:9.26:9,0,71	0/0:14,0:13:6:0,6,51	0/0:19,0:16:34.32:0,34,245	0/0:15,0:14:20.30:0,20,156	0/0:13,0:12:19.23:0,19,117
chr10	35049023	.	CTGGG	C	7715.84	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=4.273;DP=428;FS=25.478;HRun=0;HaplotypeScore=107.1828;InbreedingCoeff=0.8165;MQ=57.79;MQ0=6;MQRankSum=-5.273;QD=22.96;ReadPosRankSum=0.519;VQSLOD=2.6088;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:34,4:37:37.36:545,37,0	1/1:0,3:3:6.02:105,6,0	0/0:19,0:9:24.08:0,24,575	0/0:17,0:10:25.90:0,26,491	1/1:16,0:15:15.05:283,15,0	1/1:14,0:13:27.56:350,28,0	1/1:16,0:15:36.12:505,36,0	1/1:23,0:23:51.17:699,51,0	1/1:14,4:17:21.07:351,21,0	1/1:16,0:16:41.64:601,42,0	1/1:12,0:12:15.05:198,15,0	0/0:14,0:14:18.06:0,18,456	1/1:15,0:15:29.12:370,29,0	1/1:16,0:14:36.11:491,36,0	1/1:5,0:4:12.04:179,12,0	1/1:19,0:19:42.12:553,42,0	1/1:7,11:17:6.02:93,6,0	1/1:7,0:5:8.49:64,8,0	1/1:10,0:10:15.05:204,15,0	1/1:12,0:12:30.07:367,30,0	1/1:9,0:7:6.02:94,6,0	1/1:19,0:19:42.13:532,42,0	0/0:29,0:29:3.86:0,4,1243	0/0:13,0:13:3.88:0,4,221	1/1:10,0:9:18.06:220,18,0	1/1:16,0:14:29.36:397,29,0	1/1:14,0:13:24.08:331,24,0	1/1:10,0:10:14.26:182,14,0
chr10	35049024	.	TG	T	4833.83	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=5.622;DP=347;FS=43.160;HRun=3;HaplotypeScore=93.3939;InbreedingCoeff=0.7910;MQ=62.83;MQ0=5;MQRankSum=-4.232;QD=18.74;ReadPosRankSum=0.712;VQSLOD=2.2448;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:25:16.37:53,16,0	1/1:3,0:3:0.82:3,1,0	0/0:19,0:9:24.07:0,24,322	0/0:17,0:10:23.99:0,24,283	1/1:9,0:8:9.58:29,10,0	1/1:0,11:11:23.91:226,24,0	1/1:0,14:13:32.93:333,33,0	1/1:1,18:19:51.12:606,51,0	1/1:15,0:14:0.64:13,1,0	1/1:0,14:14:42.09:487,42,0	1/1:0,9:9:12:130,12,0	0/0:13,0:13:18.06:0,18,259	1/1:0,12:12:30.01:333,30,0	1/1:0,13:12:24.03:275,24,0	1/1:1,4:4:9.03:109,9,0	1/1:0,15:15:42:462,42,0	1/1:13,0:12:0.89:2,1,0	1/1:1,4:5:8.99:94,9,0	1/1:0,5:5:15.05:184,15,0	1/1:0,9:10:23.98:249,24,0	1/1:0,5:4:6.02:73,6,0	1/1:0,16:16:35.77:304,36,0	0/0:27,0:27:56.35:0,56,754	0/0:12,0:13:9.03:0,9,129	1/1:0,8:8:8.90:59,9,0	1/1:0,11:10:30.07:348,30,0	1/1:2,8:11:24.03:277,24,0	1/1:0,6:6:15.05:184,15,0
chr10	35052422	.	TAA	T	6934.99	PASS	AB=0.547;AC=37;AF=0.661;AN=56;BaseQRankSum=-4.102;DP=477;FS=0.000;HRun=11;HaplotypeScore=111.4522;InbreedingCoeff=0.9102;MQ=60.41;MQ0=2;MQRankSum=-4.403;QD=22.66;ReadPosRankSum=0.231;VQSLOD=4.1959;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:6,3:35:23.91:24,0,180	0/0:11,0:11:33.11:0,33,508	0/0:13,0:7:15.03:0,15,200	0/0:17,0:10:14.42:0,14,192	0/0:2,1:31:43.97:0,44,254	1/1:3,18:21:51.12:543,51,0	1/1:3,9:12:30.05:311,30,0	1/1:2,16:16:42.03:433,42,0	0/0:2,0:18:37.43:0,37,128	1/1:7,17:24:51.10:543,51,0	1/1:1,21:22:57.09:594,57,0	0/0:11,0:11:33:0,33,461	1/1:1,10:11:30.07:319,30,0	1/1:3,11:14:33.07:351,33,0	1/1:2,8:10:24.05:255,24,0	1/1:1,7:8:21.05:223,21,0	0/0:2,0:34:74.60:0,75,293	1/1:5,20:25:60.13:638,60,0	1/1:6,9:13:24.02:255,24,0	1/1:1,9:10:27.07:287,27,0	1/1:2,8:9:15.51:160,16,0	1/1:1,6:7:18.04:190,18,0	0/0:18,0:18:45.15:0,45,681	0/0:18,0:18:45.11:0,45,665	1/1:2,21:23:63.10:658,63,0	1/1:2,16:18:48.12:511,48,0	1/1:1,11:12:27.07:287,27,0	1/1:0,11:11:33.08:351,33,0
chr10	35052863	.	CT	C	7046.74	PASS	AB=1.000;AC=50;AF=0.893;AN=56;BaseQRankSum=2.992;DP=441;FS=0.000;HRun=6;HaplotypeScore=114.8256;InbreedingCoeff=0.5995;MQ=72.72;MQ0=0;MQRankSum=-3.887;QD=17.36;ReadPosRankSum=3.247;VQSLOD=3.9068;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,20:24:40.34:540,40,0	1/1:12,0:12:2.89:11,3,0	0/1:11,0:10:7.49:7,0,170	0/0:12,0:10:18.33:0,18,177	1/1:0,0:18:36.55:117,37,0	1/1:0,9:9:24.06:253,24,0	1/1:1,7:9:23.09:228,23,0	1/1:4,15:20:35.46:343,35,0	1/1:0,0:11:20.37:60,20,0	1/1:0,19:19:53.92:473,54,0	1/1:1,18:21:55.60:425,56,0	0/1:15,0:15:11.52:12,0,53	1/1:1,7:10:23.56:201,24,0	1/1:0,7:7:15.04:158,15,0	1/1:0,10:12:25.76:237,26,0	1/1:0,10:10:21.05:220,21,0	1/1:4,0:24:42.78:126,43,0	1/1:4,7:12:23.76:210,24,0	1/1:1,11:14:36.26:298,36,0	1/1:2,23:27:62.09:588,62,0	1/1:0,9:9:18:176,18,0	1/1:0,14:15:44.41:421,44,0	0/0:23,0:23:11.86:0,12,66	1/1:9,0:9:0.26:1,0,0	1/1:4,16:21:47.41:532,47,0	1/1:8,12:21:48.79:420,49,0	1/1:2,24:26:69.53:686,70,0	1/1:7,8:20:35.43:302,35,0
chr10	35052869	.	TA	T	1673.34	PASS	AB=1.000;AC=30;AF=0.536;AN=56;BaseQRankSum=5.942;DP=473;FS=0.000;HRun=10;HaplotypeScore=142.4970;InbreedingCoeff=-0.2047;MQ=70.36;MQ0=0;MQRankSum=0.252;QD=4.09;ReadPosRankSum=8.381;VQSLOD=-0.4045;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:26:50.33:50,0,59	1/1:0,10:10:24:208,24,0	0/1:11,0:10:30.34:30,0,113	0/0:10,1:9:8.88:0,9,91	0/0:18,0:18:42.66:0,43,224	0/1:13,0:13:29.29:29,0,49	0/1:10,0:10:25.36:35,0,25	0/1:20,0:20:36.46:36,0,67	0/0:11,0:11:28.29:0,28,150	0/1:24,0:24:20.75:21,0,76	0/1:22,0:22:36.58:45,0,37	1/1:3,14:17:32.99:286,33,0	0/1:10,0:10:2:14,0,2	1/1:7,0:7:12.22:51,12,0	0/1:15,0:15:14.57:15,0,49	1/1:11,0:11:11.72:40,12,0	0/0:24,0:24:22.90:0,23,275	0/1:14,0:14:2.15:2,0,86	0/1:16,0:16:4.25:4,0,75	0/1:28,0:28:56.73:59,0,57	0/1:12,0:12:6.81:7,0,32	0/1:18,0:18:23.30:53,0,23	1/1:2,20:22:53.87:453,54,0	1/1:0,9:9:26.99:234,27,0	0/1:26,0:26:61.09:61,0,124	0/1:24,0:24:20.18:20,0,113	0/1:27,0:27:10.86:81,0,11	0/1:17,0:17:11.62:12,0,91
chr10	35053619	.	A	ATTATAG	27977.45	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=0.217;DP=594;FS=0.874;HRun=0;HaplotypeScore=96.3832;InbreedingCoeff=0.9644;MQ=44.69;MQ0=3;MQRankSum=-11.696;QD=60.04;ReadPosRankSum=-0.768;VQSLOD=4.8798;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,20:28:45.14:1473,45,0	1/1:0,9:8:15.05:531,15,0	0/0:15,0:7:21.03:0,21,399	0/0:21,0:13:30.09:0,30,603	1/1:2,22:25:36.06:1107,36,0	1/1:2,14:16:30.10:1016,30,0	1/1:3,13:15:21.07:738,21,0	1/1:7,20:25:66.17:1925,66,0	1/1:0,20:23:39.13:1384,39,0	1/1:2,18:21:54.15:1647,54,0	1/1:4,15:19:30.10:1028,30,0	0/0:30,0:30:84.26:0,84,1864	1/1:0,17:22:20.82:727,21,0	1/1:2,22:25:42.14:1487,42,0	1/1:2,30:33:66.23:2261,66,0	1/1:0,19:19:36.12:1278,36,0	1/1:3,17:22:45.15:1554,45,0	1/1:2,5:8:9.03:320,9,0	1/1:4,15:19:54.14:1570,54,0	1/1:1,13:14:33.11:1155,33,0	1/1:3,12:15:17.95:426,18,0	1/1:2,15:18:30.10:1062,30,0	0/0:22,0:22:60.19:0,60,1321	0/0:40,0:40:99:0,111,2497	1/1:2,11:13:27.09:950,27,0	1/1:4,23:29:78.16:2216,78,0	1/1:1,24:29:54.05:1907,54,0	1/1:3,2:7:9.03:217,9,0
chr10	35053822	.	T	TCCCC	8667.13	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=2.828;DP=460;FS=0.580;HRun=6;HaplotypeScore=84.6146;InbreedingCoeff=0.8824;MQ=50.73;MQ0=10;MQRankSum=-4.594;QD=26.59;ReadPosRankSum=-1.867;VQSLOD=0.9144;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,19:27:27.09:604,27,0	0/0:7,0:7:15.05:0,15,239	0/0:26,0:8:9.01:0,9,141	0/0:27,0:13:14.27:0,14,182	1/1:3,0:20:38.96:441,39,0	1/1:4,13:19:12.04:307,12,0	1/1:5,20:27:20.81:528,21,0	1/1:6,8:14:20.93:301,21,0	1/1:2,1:20:36.12:491,36,0	1/1:1,10:14:27.09:564,27,0	1/1:5,5:10:15.01:275,15,0	0/0:29,0:29:81.21:0,81,1207	1/1:3,1:9:6.02:76,6,0	1/1:1,8:12:24.08:613,24,0	1/1:10,8:21:47.98:847,48,0	1/1:1,1:8:18.06:324,18,0	1/1:2,0:18:41.70:528,42,0	1/1:2,0:6:6.02:95,6,0	1/1:7,5:13:31.77:509,32,0	1/1:3,2:15:26.96:363,27,0	1/1:7,19:23:24.08:575,24,0	1/1:3,2:6:6.02:113,6,0	0/0:15,0:15:36.08:0,36,534	0/0:30,0:30:87.17:0,87,1225	1/1:0,9:10:17.81:420,18,0	1/1:2,8:12:23.73:386,24,0	1/1:2,5:9:8.86:223,9,0	1/1:4,0:5:8.98:83,9,0
chr10	35054263	.	AACAC	A	951.78	PASS	AC=12;AF=0.231;AN=52;BaseQRankSum=4.369;DP=602;FS=2.775;HRun=0;HaplotypeScore=106.1972;InbreedingCoeff=0.8176;MQ=73.17;MQ0=13;MQRankSum=-0.507;QD=7.00;ReadPosRankSum=3.232;VQSLOD=2.2974;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:32:12.02:0,12,181	0/0:9,0:9:3.01:0,3,44	./.	./.	1/1:18,3:23:20.83:279,21,0	0/0:30,0:31:41.93:0,42,790	0/0:24,0:25:18.27:0,18,297	0/0:25,0:25:9.92:0,10,144	1/1:17,6:23:8.07:138,8,0	0/0:22,0:22:25.89:0,26,392	0/0:15,0:15:9.03:0,9,205	1/1:18,0:18:6.01:71,6,0	0/0:20,0:22:17.53:0,18,223	0/0:17,0:17:15.05:0,15,324	0/0:24,0:24:26.81:0,27,462	0/0:20,0:21:27.09:0,27,567	1/1:14,9:23:14.18:231,14,0	0/0:21,0:22:33.47:0,33,603	0/0:13,0:13:5.98:0,6,91	0/0:12,0:12:9.03:0,9,208	0/0:22,0:23:35.25:0,35,543	0/0:17,0:17:18.06:0,18,333	1/1:12,6:18:9.38:121,9,0	1/1:17,11:28:18.06:279,18,0	0/0:15,0:20:15.04:0,15,263	0/0:29,0:31:37.64:0,38,561	0/0:14,0:15:14.79:0,15,291	0/0:7,0:6:6.01:0,6,89
chr10	35055129	.	CAAAAAAAAAA	C	19083.11	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=2.301;DP=331;FS=2.884;HRun=10;HaplotypeScore=116.4634;InbreedingCoeff=0.8590;MQ=62.52;MQ0=0;MQRankSum=-7.405;QD=71.47;ReadPosRankSum=3.084;VQSLOD=3.1905;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,6:6:15.05:474,15,0	1/1:0,7:7:21.07:685,21,0	0/0:18,0:16:44.83:0,45,1293	0/0:14,0:12:19.48:0,19,364	1/1:0,18:18:53.80:1594,54,0	1/1:0,17:16:42.14:1372,42,0	1/1:0,7:7:12.04:393,12,0	1/1:0,17:17:45.05:1247,45,0	1/1:0,3:3:6.02:195,6,0	1/1:0,24:24:65.60:1675,66,0	1/1:0,13:13:32.90:940,33,0	0/0:1,0:8:21.06:0,21,779	1/1:0,10:10:27.09:865,27,0	1/1:0,9:9:18.53:587,19,0	1/1:0,11:11:24.08:777,24,0	1/1:0,5:5:9.03:294,9,0	1/1:0,8:8:12.04:393,12,0	1/1:0,10:10:18.06:574,18,0	1/1:0,13:13:38.52:914,39,0	1/1:0,26:26:77.63:2212,78,0	1/1:0,5:4:3.01:98,3,0	1/1:0,13:13:35.91:1026,36,0	0/0:1,0:10:27.09:0,27,1087	0/0:2,0:11:33.11:0,33,1463	1/1:0,7:7:12.04:392,12,0	1/1:0,20:20:56.92:1690,57,0	1/1:0,10:10:18.06:588,18,0	1/1:0,8:8:3.01:98,3,0
chr10	35055240	.	G	GCACA	2515.28	PASS	AB=0.827;AC=43;AF=0.860;AN=50;BaseQRankSum=-1.240;DP=516;FS=0.000;HRun=0;HaplotypeScore=111.2010;InbreedingCoeff=-0.0032;MQ=57.42;MQ0=13;MQRankSum=-0.222;QD=5.61;ReadPosRankSum=-0.044;VQSLOD=1.5197;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:4,0:6:3:0,3,28	./.	0/1:20,0:8:0:0,0,0	1/1:18,0:18:6.02:93,6,0	./.	1/1:19,0:19:9.01:129,9,0	1/1:23,0:20:10.21:85,10,0	1/1:19,0:19:3.01:64,3,0	1/1:14,0:13:17.78:245,18,0	0/1:10,0:11:18.91:77,0,19	1/1:7,9:20:3.01:70,3,0	1/1:17,0:17:9.01:109,9,0	1/1:16,0:16:3.01:70,3,0	1/1:14,0:20:5.75:81,6,0	1/1:10,0:20:8.23:37,8,0	1/1:15,0:14:9:86,9,0	1/1:19,0:19:22.05:269,22,0	1/1:22,0:22:12.03:149,12,0	1/1:2,0:5:2.74:12,3,0	0/1:21,14:45:18.91:99,0,19	1/1:8,0:9:3.01:52,3,0	1/1:5,0:5:3.01:47,3,0	1/1:24,2:36:14.52:224,15,0	1/1:15,5:20:3.01:70,3,0	1/1:18,0:18:13.80:157,14,0	0/1:8,9:17:35.30:116,0,35	0/1:14,3:17:25.40:291,0,25
chr10	35055248	.	A	ACACA	2206.22	PASS	AB=1.000;AC=45;AF=0.865;AN=52;BaseQRankSum=-2.002;DP=531;FS=0.000;HRun=0;HaplotypeScore=95.2607;InbreedingCoeff=0.0173;MQ=51.61;MQ0=17;MQRankSum=-0.174;QD=4.53;ReadPosRankSum=0.567;VQSLOD=1.9222;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:6,0:6:3:0,3,28	1/1:27,0:15:0.89:2,1,0	0/1:25,0:8:0:1,0,0	1/1:17,0:17:6.02:93,6,0	./.	1/1:16,4:21:9.01:129,9,0	1/1:23,0:18:4.88:13,5,0	1/1:19,0:19:3.01:64,3,0	1/1:15,0:14:14.77:207,15,0	0/1:11,0:11:18.91:77,0,19	1/1:23,0:23:3.01:70,3,0	1/1:18,0:18:9.01:109,9,0	1/1:18,0:18:3.01:70,3,0	1/1:23,0:23:5.75:81,6,0	1/1:18,0:18:9.12:38,9,0	1/1:15,0:14:7.83:68,8,0	1/1:18,0:18:16.92:194,17,0	1/1:22,0:22:9.02:111,9,0	1/1:7,0:7:2.74:12,3,0	0/1:49,0:48:18.91:99,0,19	1/1:9,0:9:3.01:52,3,0	1/1:5,0:5:3.01:47,3,0	1/1:35,0:34:14.52:224,15,0	1/1:21,0:21:3.01:70,3,0	1/1:16,0:16:11.71:138,12,0	0/1:17,0:17:38.31:64,0,38	0/1:14,0:13:25.40:291,0,25
chr10	35055254	.	A	ACACA	2207.28	PASS	AB=1.000;AC=45;AF=0.865;AN=52;BaseQRankSum=-1.916;DP=545;FS=0.000;HRun=0;HaplotypeScore=95.1617;InbreedingCoeff=0.0177;MQ=49.81;MQ0=20;MQRankSum=-0.844;QD=4.39;ReadPosRankSum=-0.160;VQSLOD=1.7116;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:5,0:5:3:0,3,28	1/1:27,0:12:0.89:2,1,0	0/1:28,0:7:0:1,0,0	1/1:16,0:16:6.02:93,6,0	./.	1/1:23,0:23:8.85:129,9,0	1/1:25,0:20:4.88:13,5,0	1/1:20,0:20:3.01:64,3,0	1/1:18,0:16:14.77:207,15,0	0/1:10,0:10:18.91:77,0,19	1/1:24,0:24:3.01:70,3,0	1/1:18,0:18:9.01:109,9,0	1/1:10,7:18:3.01:70,3,0	1/1:23,0:23:5.75:81,6,0	1/1:19,0:19:9.12:38,9,0	1/1:15,0:14:7.83:68,8,0	1/1:18,0:18:16.92:194,17,0	1/1:18,0:18:9.02:111,9,0	1/1:8,0:8:2.74:12,3,0	0/1:51,0:50:18.91:99,0,19	1/1:9,0:9:3.01:52,3,0	1/1:5,0:5:3.01:47,3,0	1/1:37,0:36:14.52:224,15,0	1/1:22,0:22:3.01:70,3,0	1/1:16,0:16:12.59:140,13,0	0/1:19,0:19:38.31:64,0,38	0/1:15,0:14:25.40:291,0,25
chr10	35055285	.	C	CAG	641.30	PASS	AB=1.000;AC=13;AF=0.241;AN=54;BaseQRankSum=8.232;DP=540;FS=16.802;HRun=0;HaplotypeScore=98.5943;InbreedingCoeff=0.2252;MQ=65.02;MQ0=17;MQRankSum=-1.509;QD=3.79;ReadPosRankSum=-1.971;VQSLOD=0.7047;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:4,0:4:8.98:0,9,73	0/0:37,0:24:66:0,66,624	0/0:36,0:20:50.26:0,50,459	1/1:12,0:12:6.88:52,7,0	0/0:17,0:16:17.86:0,18,131	0/0:24,0:24:25.53:0,26,297	0/0:21,0:19:42.66:0,43,376	1/1:21,0:21:35.78:281,36,0	0/1:23,0:21:13.11:13,0,254	0/1:6,0:6:18.36:30,0,18	0/0:15,0:15:10.71:0,11,97	0/1:19,0:19:2.66:3,0,151	0/0:17,0:17:15.25:0,15,157	0/0:22,0:22:7.36:0,7,179	0/1:17,0:17:37.98:38,0,129	1/1:17,1:18:36.99:308,37,0	0/1:17,0:17:50.43:50,0,107	0/0:22,0:22:15.90:0,16,392	0/1:7,0:7:11.32:11,0,39	0/0:46,0:44:44.22:0,44,457	0/0:10,0:10:5.36:0,5,86	0/0:7,0:6:5.97:0,6,49	0/1:28,0:28:13.54:14,0,136	0/0:9,0:9:14.30:0,14,124	0/0:21,0:21:8.90:0,9,194	0/0:16,0:16:7.74:0,8,121	0/0:20,0:19:10.65:0,11,275
chr10	35056364	.	TGTCACTAGGGGTGGGCTTTGAG	T	24591.07	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=11.813;DP=389;FS=25.886;HRun=0;HaplotypeScore=242.4551;InbreedingCoeff=0.8621;MQ=48.54;MQ0=0;MQRankSum=-11.970;QD=86.89;ReadPosRankSum=3.730;VQSLOD=2.8632;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:11,13:23:24.08:1313,24,0	1/1:1,3:4:9.03:460,9,0	0/0:20,0:19:52.92:0,53,2556	0/0:23,0:20:53.19:0,53,2578	1/1:8,8:16:21.07:770,21,0	1/1:1,5:6:15.05:920,15,0	1/1:6,2:8:6.02:368,6,0	1/1:13,3:16:9.03:284,9,0	1/1:2,11:13:30.10:1839,30,0	1/1:13,10:23:30.10:1839,30,0	1/1:4,13:17:33.03:1737,33,0	0/0:18,0:18:54.19:0,54,4511	1/1:3,7:10:21.07:1264,21,0	1/1:1,4:5:9.03:552,9,0	1/1:0,9:9:21.07:1287,21,0	1/1:5,9:14:27.09:1655,27,0	1/1:4,2:6:3.48:100,3,0	1/1:2,6:8:18.06:1066,18,0	1/1:7,2:9:6.02:368,6,0	1/1:3,14:17:39.13:2189,39,0	1/1:9,3:12:15.04:572,15,0	1/1:9,8:17:24.08:1459,24,0	0/0:26,0:26:78.27:0,78,7362	0/0:19,0:19:57.20:0,57,5567	1/1:4,10:14:27.09:1648,27,0	1/1:7,8:14:21.05:1127,21,0	1/1:5,7:12:18.06:1040,18,0	1/1:2,6:8:12.04:736,12,0
chr10	35056434	.	CTCTCCTTCCCCT	C	7670.79	PASS	AC=40;AF=0.769;AN=52;BaseQRankSum=6.770;DP=367;FS=14.850;HRun=0;HaplotypeScore=169.5445;InbreedingCoeff=0.7750;MQ=55.52;MQ0=8;MQRankSum=-8.959;QD=33.50;ReadPosRankSum=2.875;VQSLOD=3.6853;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,5:16:27.09:586,27,0	1/1:1,4:5:3.01:106,3,0	0/0:27,0:13:26.44:0,26,511	0/0:44,0:24:24.05:0,24,665	1/1:7,2:9:3:26,3,0	1/1:7,2:8:9.03:252,9,0	1/1:13,0:12:9.03:238,9,0	1/1:11,0:11:12.03:185,12,0	1/1:16,2:19:42.02:953,42,0	1/1:11,2:13:24.04:534,24,0	./.	0/0:19,0:19:51.17:0,51,2006	1/1:9,2:11:18.06:468,18,0	1/1:0,8:8:6.02:212,6,0	1/1:9,5:14:21.07:572,21,0	1/1:12,4:15:33.11:822,33,0	1/1:5,1:6:15.05:290,15,0	./.	1/1:9,1:10:6.02:139,6,0	1/1:8,2:9:15.05:379,15,0	1/1:7,0:7:1.13:16,1,0	1/1:16,5:22:45.06:980,45,0	0/0:10,0:10:30.08:0,30,1402	0/0:24,0:24:54.19:0,54,2510	1/1:8,2:10:12.03:280,12,0	1/1:8,1:9:21:411,21,0	1/1:7,3:10:11.99:222,12,0	0/0:2,0:2:4.23:0,4,26
chr10	35056532	.	TGCGCGAGC	T	2953.12	PASS	AB=0.835;AC=28;AF=0.538;AN=52;BaseQRankSum=4.137;DP=351;FS=12.103;HRun=0;HaplotypeScore=162.0454;InbreedingCoeff=0.2760;MQ=80.71;MQ0=1;MQRankSum=-6.572;QD=14.34;ReadPosRankSum=1.911;VQSLOD=2.0888;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:11,2:13:5.96:61,6,0	0/0:5,0:5:2.68:0,3,11	0/0:17,0:15:14.34:0,14,124	0/0:19,0:14:13.65:0,14,225	1/1:8,1:11:3.45:26,3,0	0/1:8,2:11:21.09:42,0,21	0/1:10,2:12:7.28:19,0,7	1/1:6,9:15:29.98:533,30,0	1/1:8,2:13:14.91:122,15,0	1/1:9,2:11:26.97:375,27,0	0/1:8,2:10:12.17:15,0,12	0/0:23,0:23:60.21:0,60,2063	0/1:11,4:15:48.39:298,0,48	0/1:10,1:11:2.78:3,0,41	0/1:6,1:7:15.66:17,0,16	1/1:9,1:9:4.25:34,4,0	1/1:9,3:13:17.91:245,18,0	1/1:6,1:8:7.09:227,7,0	1/1:9,2:11:14.77:305,15,0	0/1:9,1:9:8.87:19,0,9	./.	./.	0/0:17,0:17:32.68:0,33,1238	0/0:27,0:27:69.16:0,69,2336	0/0:8,4:12:2.68:0,3,14	1/1:11,4:15:33.05:640,33,0	0/1:6,3:10:57.22:147,0,57	0/0:4,0:4:2.84:0,3,14
chr10	35056534	.	CGCGA	C	2025.68	PASS	AB=0.975;AC=37;AF=0.712;AN=52;BaseQRankSum=7.318;DP=339;FS=19.496;HRun=0;HaplotypeScore=143.7892;InbreedingCoeff=0.3388;MQ=76.76;MQ0=2;MQRankSum=-6.898;QD=8.88;ReadPosRankSum=2.022;VQSLOD=1.6891;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,2:15:6.42:43,6,0	1/1:5,0:5:1.82:5,2,0	0/1:14,0:12:7.96:8,0,66	0/0:21,0:13:7.64:0,8,111	1/1:6,5:11:2.95:25,3,0	0/1:11,0:11:6.31:19,0,6	1/1:11,1:12:3.99:27,4,0	1/1:12,1:13:29.97:343,30,0	1/1:8,5:13:15:246,15,0	1/1:9,0:9:17.43:209,17,0	0/1:9,0:9:12.20:15,0,12	0/0:23,0:23:63.08:0,63,1213	1/1:14,1:15:4.30:169,4,0	1/1:11,0:11:2.09:15,2,0	0/1:6,1:7:1.32:20,0,1	1/1:9,0:9:3:38,3,0	1/1:9,4:13:18.06:311,18,0	1/1:8,0:8:5.64:109,6,0	1/1:10,0:10:20.20:230,20,0	1/1:8,1:9:3.81:27,4,0	./.	./.	0/0:18,0:17:33.11:0,33,681	0/0:28,0:28:69.14:0,69,1354	1/1:10,1:11:0.89:2,1,0	1/1:12,1:13:29.76:281,30,0	0/1:10,0:10:26.34:37,0,26	0/0:1,0:1:0.47:0,0,1
chr10	35056536	.	CGA	C	1578.65	PASS	AB=0.864;AC=40;AF=0.769;AN=52;BaseQRankSum=8.063;DP=326;FS=21.259;HRun=0;HaplotypeScore=134.0817;InbreedingCoeff=0.5010;MQ=70.93;MQ0=5;MQRankSum=-8.000;QD=7.63;ReadPosRankSum=1.723;VQSLOD=2.0794;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:11,4:15:6:68,6,0	1/1:4,0:4:2.74:12,3,0	0/0:11,0:9:11.86:0,12,90	0/0:21,0:11:14.85:0,15,154	1/1:10,0:10:2.81:25,3,0	1/1:11,0:11:0.71:21,1,0	1/1:11,0:11:5.48:36,5,0	1/1:11,0:11:29.79:225,30,0	1/1:12,0:12:14.82:97,15,0	1/1:8,1:9:15.72:198,16,0	0/1:5,3:8:6.36:15,0,6	0/0:22,0:22:63.12:0,63,941	1/1:14,1:15:18.25:148,18,0	1/1:9,1:10:5.37:50,5,0	1/1:7,0:7:1.28:26,1,0	1/1:8,1:9:2.98:25,3,0	1/1:13,2:15:23.76:165,24,0	1/1:8,0:8:3.60:85,4,0	1/1:8,1:9:20.66:183,21,0	1/1:8,0:8:5.59:35,6,0	./.	./.	0/0:18,0:17:32.84:0,33,620	0/0:29,0:29:69.12:0,69,1081	1/1:11,0:11:2.60:10,3,0	1/1:12,1:13:38.30:265,38,0	0/1:10,0:10:5.94:45,0,6	1/1:1,0:1:2.22:7,2,0
chr10	35056539	.	G	GCACACA	1858.01	PASS	AB=0.948;AC=32;AF=0.615;AN=52;BaseQRankSum=3.923;DP=303;FS=13.838;HRun=0;HaplotypeScore=143.6946;InbreedingCoeff=0.0566;MQ=66.19;MQ0=5;MQRankSum=-5.244;QD=9.78;ReadPosRankSum=-1.564;VQSLOD=1.3322;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:1.06:0,1,3	1/1:2,1:3:3.01:96,3,0	0/1:10,0:7:12.23:12,0,29	0/1:19,0:9:15.39:15,0,153	1/1:9,0:9:0.23:0,0,0	1/1:10,1:11:5.98:117,6,0	1/1:6,3:9:3.01:97,3,0	0/1:10,0:10:28.78:29,0,36	0/1:11,0:11:5.05:5,0,74	0/1:7,0:7:2.88:115,0,3	0/1:6,1:7:0:0,0,0	0/0:23,0:23:63.22:0,63,1513	1/1:10,3:15:14.63:416,15,0	1/1:7,2:9:5.97:102,6,0	1/1:3,1:5:3.01:98,3,0	1/1:7,1:9:5.99:82,6,0	0/0:16,0:16:2.53:0,3,71	0/1:6,0:8:9.23:195,0,9	0/1:6,0:7:5.14:185,0,5	1/1:4,0:6:3.01:50,3,0	./.	./.	0/0:18,0:17:32.65:0,33,812	0/0:27,0:27:57.15:0,57,1350	1/1:10,1:11:2.99:97,3,0	0/1:12,1:13:33.66:171,0,34	0/1:10,0:10:22.81:23,0,29	1/1:0,1:1:3.01:99,3,0
chr10	35056551	.	GCA	G	1065.01	PASS	AB=1.000;AC=8;AF=0.143;AN=56;BaseQRankSum=-6.537;DP=445;FS=0.784;HRun=0;HaplotypeScore=154.2349;InbreedingCoeff=0.4660;MQ=50.54;MQ0=11;MQRankSum=7.090;QD=11.45;ReadPosRankSum=4.945;VQSLOD=3.5736;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:18,0:18:3.82:4,0,19	0/0:4,0:4:3:0,3,26	0/0:28,0:10:15:0,15,173	0/0:22,0:4:3:0,3,26	0/1:10,0:10:0.12:0,0,0	0/0:15,0:15:5.84:0,6,40	0/0:17,0:15:5.93:0,6,49	0/0:20,0:19:40.16:0,40,253	0/0:15,0:15:14.84:0,15,71	0/0:16,0:14:30.10:0,30,229	0/0:17,0:15:8.65:0,9,50	1/1:4,18:22:43.68:496,44,0	0/0:15,0:15:22.24:0,22,163	0/0:18,0:18:2.61:0,3,46	0/0:11,0:9:5.04:0,5,32	0/0:18,0:17:8.05:0,8,67	0/0:19,0:19:29.17:0,29,168	0/0:9,0:9:18.99:0,19,137	0/0:10,0:8:12.04:0,12,80	0/0:8,0:7:2.73:0,3,26	0/0:18,0:17:8.92:0,9,62	0/0:8,0:8:3.87:0,4,24	1/1:6,13:18:18.05:211,18,0	1/1:6,18:24:1:480,1,0	0/0:19,0:19:9:0,9,77	0/0:19,0:19:36.57:0,37,256	0/0:20,0:20:22.15:0,22,204	0/0:6,0:6:14.88:0,15,107
chr10	35057868	.	G	GTCTC	2801.56	PASS	AB=0.875;AC=46;AF=0.885;AN=52;BaseQRankSum=-0.384;DP=657;FS=17.574;HRun=0;HaplotypeScore=186.2816;InbreedingCoeff=0.2484;MQ=64.59;MQ0=7;MQRankSum=-0.352;QD=5.37;ReadPosRankSum=-2.688;VQSLOD=0.9035;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:22,6:33:16.95:64,0,17	1/1:7,0:7:2.98:21,3,0	./.	./.	1/1:28,0:27:5.52:72,6,0	1/1:17,0:17:6.01:91,6,0	1/1:22,0:22:3.48:67,3,0	1/1:35,0:33:8.12:45,8,0	0/0:17,0:26:11.76:0,12,111	1/1:18,0:17:15.99:249,16,0	1/1:18,0:17:12.03:211,12,0	1/1:15,7:23:3.01:70,3,0	1/1:18,0:18:8.47:56,8,0	1/1:14,0:14:3.01:62,3,0	1/1:25,5:32:2.97:70,3,0	1/1:19,0:20:4.99:26,5,0	0/0:28,0:32:18.15:0,18,291	1/1:19,0:19:15.01:226,15,0	1/1:26,0:25:10.84:155,11,0	1/1:20,0:20:9.01:141,9,0	1/1:24,0:22:9.02:133,9,0	1/1:20,0:20:3:25,3,0	1/1:16,2:18:2.91:70,3,0	1/1:20,0:19:12.04:251,12,0	1/1:26,0:25:6.02:118,6,0	1/1:22,0:22:16.46:296,16,0	0/1:22,0:22:27.42:211,0,27	1/1:19,0:19:15.41:202,15,0
chr10	35057994	.	ACTG	A	24809.97	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=6.677;DP=609;FS=0.376;HRun=0;HaplotypeScore=140.7906;InbreedingCoeff=0.9993;MQ=64.96;MQ0=1;MQRankSum=-8.340;QD=51.58;ReadPosRankSum=4.952;VQSLOD=6.7556;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,24:24:69.24:1286,69,0	0/0:10,0:10:30.10:0,30,739	0/0:17,0:15:37.62:0,38,673	0/0:23,0:20:48.02:0,48,1047	1/1:0,32:32:87.30:1620,87,0	1/1:0,16:16:45.15:838,45,0	1/1:0,20:20:51.17:950,51,0	1/1:0,19:18:51.17:950,51,0	1/1:0,27:27:78.27:1453,78,0	1/1:0,30:30:90.31:1677,90,0	1/1:0,20:20:54.19:1006,54,0	0/0:23,0:23:69.24:0,69,1701	1/1:0,22:22:60.21:1118,60,0	1/1:0,17:17:45.15:838,45,0	1/1:0,24:24:63.22:1173,63,0	1/1:0,19:19:54.19:1006,54,0	1/1:0,32:32:87.30:1620,87,0	1/1:0,12:12:24.08:447,24,0	1/1:0,11:11:30.10:556,30,0	1/1:0,38:38:99:2011,108,0	1/1:0,21:21:54.19:1006,54,0	1/1:0,30:30:87.30:1621,87,0	0/0:21,0:21:60.21:0,60,1478	0/0:34,0:34:99:0,99,2404	1/1:0,16:16:48.16:895,48,0	1/1:0,19:19:57.20:1062,57,0	1/1:0,20:20:57.20:1062,57,0	1/1:0,12:12:33.11:615,33,0
chr10	35059550	.	G	GA	188.06	PASS	AB=0.889;AC=17;AF=0.531;AN=32;BaseQRankSum=-1.581;DP=68;FS=3.905;HRun=0;HaplotypeScore=14.3488;InbreedingCoeff=0.1757;MQ=89.81;MQ0=5;MQRankSum=1.861;QD=5.53;ReadPosRankSum=-2.222;VQSLOD=2.1148;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	0/0:2,0:2:6.02:0,6,84	0/1:18,0:7:5.35:5,0,134	0/0:15,0:7:0.02:0,0,42	1/1:1,0:1:3:25,3,0	1/1:1,0:1:3:25,3,0	0/1:4,0:4:32.88:40,0,33	0/0:3,0:1:3.01:0,3,42	./.	1/1:1,0:1:3:27,3,0	./.	./.	./.	./.	./.	0/1:1,1:2:35.62:40,0,36	./.	1/1:2,0:2:5.97:45,6,0	1/1:1,1:1:3.01:46,3,0	./.	1/1:0,2:2:3.01:46,3,0	1/1:1,0:1:0.47:1,0,0	0/0:2,0:2:6.02:0,6,84	0/0:4,0:4:11.99:0,12,130	./.	0/0:2,0:2:3:0,3,26	./.	./.
chr10	35060315	.	T	TACAC	2860.07	PASS	AB=0.866;AC=35;AF=0.673;AN=52;BaseQRankSum=-2.750;DP=539;FS=10.896;HRun=0;HaplotypeScore=120.7383;InbreedingCoeff=0.1483;MQ=70.49;MQ0=8;MQRankSum=-0.810;QD=7.04;ReadPosRankSum=-2.681;VQSLOD=1.5151;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:28:6.15:6,0,167	0/0:3,0:7:5.98:0,6,49	./.	./.	1/1:14,0:14:6.02:85,6,0	1/1:9,6:17:5.38:79,5,0	1/1:9,4:17:2.84:71,3,0	1/1:21,0:21:3.91:22,4,0	1/1:25,0:24:21.05:325,21,0	0/1:17,0:17:31.84:92,0,32	1/1:10,6:18:6.02:126,6,0	0/0:7,0:14:3:0,3,28	1/1:7,0:7:6.02:116,6,0	0/1:6,7:15:40.58:65,0,41	1/1:18,0:19:11.76:178,12,0	1/1:17,0:17:3:25,3,0	1/1:18,0:18:15.04:271,15,0	0/0:8,0:11:18.04:0,18,223	1/1:13,0:13:9.03:143,9,0	1/1:16,1:18:3.01:70,3,0	1/1:21,9:35:2.25:209,2,0	0/1:21,0:31:34.70:138,0,35	0/0:15,0:16:5.99:0,6,50	0/0:12,0:24:23.86:0,24,223	0/1:20,0:20:16.51:443,0,17	0/1:18,0:18:28.54:260,0,29	0/1:11,3:21:14.21:86,0,14	1/1:9,8:17:9.03:212,9,0
chr10	35061140	.	AGGAC	A	2270.36	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=4.200;DP=410;FS=0.619;HRun=0;HaplotypeScore=102.8769;InbreedingCoeff=0.9379;MQ=89.73;MQ0=1;MQRankSum=-7.148;QD=36.04;ReadPosRankSum=2.188;VQSLOD=3.5271;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,22:23:48.16:930,48,0	1/1:1,4:5:12.04:228,12,0	0/0:19,0:18:48.09:0,48,1073	0/0:18,0:18:42.74:0,43,909	1/1:0,10:10:3.01:58,3,0	0/0:13,0:13:36.12:0,36,936	0/0:28,0:28:69.24:0,69,1758	0/0:13,0:13:36.11:0,36,762	1/1:0,11:11:30.10:581,30,0	0/0:14,0:14:42.14:0,42,1079	0/0:8,0:8:21.07:0,21,556	0/0:17,0:17:51.16:0,51,1285	0/0:9,0:9:24.07:0,24,598	0/0:7,0:7:18.06:0,18,445	0/0:12,0:12:30.10:0,30,775	0/0:9,0:9:24.07:0,24,565	1/1:3,11:14:33.11:638,33,0	0/0:17,0:17:42.14:0,42,1148	0/0:11,0:11:33.11:0,33,877	0/0:6,0:6:12.04:0,12,324	0/0:44,0:44:99:0,114,3024	0/0:17,0:17:45.15:0,45,1102	0/0:10,0:10:30.09:0,30,764	0/0:30,0:30:87.30:0,87,2382	0/0:13,0:13:33.11:0,33,893	0/0:15,0:15:42.14:0,42,1120	0/0:10,0:10:24.08:0,24,595	0/0:7,0:7:21.07:0,21,535
chr10	35061183	.	GCTC	G	6456.90	PASS	AC=44;AF=0.815;AN=54;BaseQRankSum=8.516;DP=282;FS=48.214;HRun=0;HaplotypeScore=66.8108;InbreedingCoeff=0.8084;MQ=86.89;MQ0=0;MQRankSum=-7.613;QD=32.61;ReadPosRankSum=4.005;VQSLOD=3.1458;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,10:14:33.10:500,33,0	./.	0/0:14,0:13:33.11:0,33,685	0/0:17,0:17:36.08:0,36,676	1/1:1,5:6:3.01:48,3,0	1/1:3,11:14:33.11:523,33,0	1/1:2,18:20:45.15:713,45,0	1/1:1,7:8:18.06:277,18,0	1/1:1,2:3:6.02:95,6,0	1/1:1,8:9:24.08:380,24,0	1/1:0,4:4:9.50:144,10,0	0/0:15,0:15:45.15:0,45,966	1/1:0,3:2:6.02:94,6,0	1/1:1,5:6:9.03:143,9,0	1/1:1,9:10:21.07:333,21,0	1/1:0,2:2:3.01:48,3,0	1/1:2,10:12:30.10:475,30,0	1/1:3,14:17:39.13:618,39,0	1/1:2,5:7:12.04:190,12,0	1/1:1,7:8:21.07:333,21,0	1/1:5,20:25:29.76:475,30,0	1/1:0,3:3:9.03:143,9,0	0/0:10,0:10:30.10:0,30,653	0/0:26,0:26:75.26:0,75,1603	1/1:1,5:6:12.04:190,12,0	1/1:3,7:10:21.04:307,21,0	1/1:0,9:9:21:333,21,0	1/1:0,2:2:6.02:95,6,0
chr10	35061315	.	TTC	T	2124.99	PASS	AB=0.933;AC=28;AF=0.519;AN=54;BaseQRankSum=4.842;DP=382;FS=43.390;HRun=0;HaplotypeScore=60.6084;InbreedingCoeff=-0.2566;MQ=47.95;MQ0=20;MQRankSum=-3.379;QD=6.64;ReadPosRankSum=3.976;VQSLOD=1.4018;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:22,2:23:38.42:312,38,0	0/1:5,1:6:35.03:57,0,35	0/0:10,0:3:5.38:0,5,40	./.	0/1:20,0:19:74.18:74,0,86	1/1:7,1:8:10.73:105,11,0	0/1:11,1:9:4.55:97,0,5	0/1:14,0:13:18.30:122,0,18	0/1:11,0:11:4.18:110,0,4	0/1:15,4:19:69.32:161,0,69	0/1:8,0:8:12.13:42,0,12	0/0:13,0:13:14.20:0,14,368	0/1:13,0:10:17.42:81,0,17	0/1:8,0:8:11.06:38,0,11	1/1:13,1:14:6.58:134,7,0	1/1:11,0:11:4.99:69,5,0	0/1:18,4:17:38.86:159,0,39	0/1:19,2:19:2.24:137,0,2	0/1:10,4:13:68.51:130,0,69	1/1:9,0:6:10.73:57,11,0	0/1:8,2:7:1.27:63,0,1	0/1:15,0:14:8.90:88,0,9	0/0:13,0:13:30.10:0,30,495	0/0:24,0:24:26.98:0,27,430	0/1:12,1:13:1.68:99,0,2	0/1:15,2:15:36.38:36,0,53	0/1:24,0:22:66.29:85,0,66	0/1:7,0:4:15.08:26,0,15
chr10	35061317	.	CTT	C	4024.47	PASS	AB=0.684;AC=45;AF=0.833;AN=54;BaseQRankSum=-0.986;DP=376;FS=0.000;HRun=9;HaplotypeScore=54.7734;InbreedingCoeff=0.6235;MQ=47.98;MQ0=19;MQRankSum=-3.571;QD=12.78;ReadPosRankSum=2.129;VQSLOD=0.4050;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,14:23:39.07:447,39,0	1/1:4,2:6:9.02:103,9,0	0/0:8,0:2:3.01:0,3,42	./.	1/1:10,8:17:11.89:140,12,0	1/1:3,4:7:15.04:173,15,0	0/1:7,6:10:21.19:118,0,21	1/1:5,9:13:27.07:314,27,0	1/1:6,5:11:13.99:173,14,0	1/1:10,7:17:23.97:276,24,0	1/1:4,3:7:9.01:104,9,0	0/0:13,0:13:32.42:0,32,431	1/1:8,5:10:5.68:70,6,0	1/1:2,7:9:9:105,9,0	1/1:6,8:14:21:243,21,0	1/1:6,5:11:2.94:35,3,0	1/1:15,6:17:21.12:214,21,0	1/1:9,12:19:5.26:156,5,0	1/1:11,3:13:18.01:206,18,0	1/1:3,6:6:11.97:123,12,0	1/1:8,2:7:9.02:104,9,0	1/1:4,11:14:24.06:279,24,0	0/0:13,0:13:30.09:0,30,461	0/0:24,0:25:27.09:0,27,421	1/1:7,6:13:21.05:243,21,0	1/1:8,8:14:18.02:198,18,0	1/1:11,13:22:6.62:132,7,0	1/1:4,3:4:6.02:70,6,0
chr10	35061594	.	C	CAT	6114.80	PASS	AB=0.628;AC=40;AF=0.714;AN=56;BaseQRankSum=-7.229;DP=704;FS=3.925;HRun=0;HaplotypeScore=89.6489;InbreedingCoeff=0.4277;MQ=68.60;MQ0=7;MQRankSum=0.206;QD=11.08;ReadPosRankSum=-0.379;VQSLOD=4.2237;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:10,1:48:5.53:72,0,6	1/1:0,7:7:3.01:59,3,0	0/0:28,0:14:23.92:0,24,236	0/0:31,0:17:36.64:0,37,327	1/1:17,3:20:39.79:495,40,0	1/1:16,6:24:16.16:318,16,0	1/1:26,2:29:48.98:623,49,0	1/1:20,0:20:36.43:399,36,0	1/1:3,24:28:3.56:410,4,0	1/1:3,11:15:23.64:283,24,0	0/1:2,12:14:1.27:56,0,1	0/0:26,0:30:41.36:0,41,411	1/1:2,14:19:3.94:175,4,0	1/1:9,21:34:15.89:335,16,0	1/1:3,26:30:7.19:316,7,0	1/1:2,24:28:11.60:244,12,0	0/1:8,21:31:21.68:254,0,22	0/1:22,0:22:15.98:222,0,16	1/1:0,15:18:45.27:417,45,0	1/1:8,0:8:11.96:95,12,0	1/1:7,48:62:6.02:84,6,0	0/1:1,11:13:2.15:48,0,2	0/0:12,0:16:12.06:0,12,201	0/0:24,0:47:38.05:0,38,437	0/1:6,10:21:39.27:47,0,39	1/1:1,20:23:50.77:565,51,0	1/1:2,14:16:6.02:121,6,0	1/1:15,3:18:47.84:478,48,0
chr10	35062481	.	C	CA	12618.97	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-9.304;DP=598;FS=5.245;HRun=9;HaplotypeScore=62.5948;InbreedingCoeff=0.9495;MQ=81.93;MQ0=0;MQRankSum=-1.672;QD=25.34;ReadPosRankSum=2.742;VQSLOD=5.7226;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:31:54.60:286,55,0	1/1:0,13:13:36.10:398,36,0	0/0:13,0:14:8.32:0,8,121	0/0:24,0:24:11.89:0,12,243	1/1:6,30:36:90.14:955,90,0	1/1:1,18:19:31.10:571,31,0	1/1:2,15:17:36.10:398,36,0	1/1:4,19:23:57.13:620,57,0	1/1:2,17:19:45.12:498,45,0	1/1:4,22:26:66.18:730,66,0	1/1:5,16:21:42.11:463,42,0	0/0:17,1:18:5.81:0,6,279	1/1:1,12:13:36.10:398,36,0	1/1:4,20:24:57.14:621,57,0	1/1:2,25:27:72.19:796,72,0	1/1:1,12:13:36.10:398,36,0	1/1:4,17:21:45.12:498,45,0	1/1:3,28:31:78.21:863,78,0	1/1:4,19:23:34.10:605,34,0	1/1:1,25:26:75:762,75,0	1/1:6,16:22:42.11:465,42,0	1/1:4,16:20:48.13:531,48,0	0/0:25,0:25:65.96:0,66,569	0/0:19,0:19:50.98:0,51,443	1/1:3,9:12:27.07:299,27,0	1/1:4,22:26:61.05:662,61,0	1/1:4,16:20:39.03:418,39,0	1/1:0,14:15:36.05:384,36,0
chr10	35063450	.	TC	T	12083.27	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=4.374;DP=582;FS=15.154;HRun=7;HaplotypeScore=63.8457;InbreedingCoeff=0.9838;MQ=85.59;MQ0=1;MQRankSum=-5.941;QD=25.07;ReadPosRankSum=5.825;VQSLOD=3.5988;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,31:36:84.17:850,84,0	1/1:0,4:4:12.02:122,12,0	0/0:29,0:27:59.23:0,59,605	0/0:22,1:21:22.54:0,23,375	1/1:0,11:11:33:322,33,0	1/1:1,29:30:84.18:853,84,0	1/1:2,21:23:51.11:519,51,0	1/1:2,22:24:66.11:653,66,0	1/1:1,26:27:69.15:701,69,0	1/1:2,23:25:65.98:643,66,0	1/1:2,8:10:24.01:231,24,0	0/0:20,0:20:54.13:0,54,631	1/1:1,23:24:66.15:672,66,0	1/1:1,15:16:42.09:426,42,0	1/1:2,21:23:39.08:397,39,0	1/1:0,25:25:63.13:640,63,0	1/1:2,34:36:84.18:854,84,0	1/1:0,23:23:63.13:640,63,0	1/1:2,20:22:60.10:597,60,0	1/1:0,11:11:32.91:308,33,0	1/1:2,26:28:26:573,26,0	1/1:3,5:8:18.03:177,18,0	0/0:6,0:6:15.05:0,15,186	0/0:22,0:22:66.17:0,66,780	1/1:1,22:23:66.13:664,66,0	1/1:2,16:18:47.98:451,48,0	1/1:2,26:28:60.12:609,60,0	1/1:0,7:7:18.04:182,18,0
chr10	35063691	.	CATATATATATATAT	C	8604.33	PASS	AC=34;AF=0.680;AN=50;BaseQRankSum=-4.035;DP=226;FS=0.000;HRun=0;HaplotypeScore=91.0894;InbreedingCoeff=0.6324;MQ=66.70;MQ0=3;MQRankSum=-2.240;QD=52.15;ReadPosRankSum=0.782;VQSLOD=4.3721;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:3.01:0,3,44	0/0:1,0:2:3.01:0,3,184	0/0:8,0:4:0:0,0,0	0/0:9,0:5:2.99:0,3,25	0/0:4,0:5:6.02:0,6,242	1/1:7,11:18:21.05:744,21,0	1/1:3,0:3:3.01:104,3,0	1/1:4,7:11:24.05:604,24,0	0/0:3,0:4:6.02:0,6,208	1/1:6,5:11:12.02:384,12,0	1/1:3,2:6:9.03:338,9,0	0/0:2,0:3:2.99:0,3,23	1/1:2,5:7:12.04:481,12,0	1/1:2,6:8:15.05:585,15,0	1/1:2,8:10:15.05:601,15,0	1/1:3,1:4:3.01:120,3,0	0/0:6,0:16:21.07:0,21,529	1/1:5,10:15:15.05:601,15,0	1/1:7,9:15:28.29:680,28,0	1/1:5,0:5:3.01:40,3,0	1/1:2,2:4:3.01:54,3,0	./.	./.	./.	1/1:2,11:16:36.12:1375,36,0	1/1:3,8:11:24.04:739,24,0	1/1:4,6:10:9.03:360,9,0	1/1:2,6:10:21.07:796,21,0
chr10	35063708	.	AT	A	477.65	PASS	AB=0.946;AC=24;AF=0.480;AN=50;BaseQRankSum=7.769;DP=204;FS=0.000;HRun=1;HaplotypeScore=75.7162;InbreedingCoeff=0.1022;MQ=70.32;MQ0=6;MQRankSum=-5.872;QD=3.62;ReadPosRankSum=6.359;VQSLOD=-0.0625;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:3,0:3:6.02:0,6,75	0/0:1,0:1:3:0,3,28	0/0:20,1:9:5.50:0,6,59	0/0:21,0:10:2.74:0,3,40	0/0:2,0:2:3.31:0,3,16	1/1:14,0:13:15.42:78,15,0	0/1:1,3:4:31.70:34,0,32	0/1:14,0:14:65.81:66,0,253	0/0:3,0:2:0.94:0,1,3	0/1:5,0:5:6.99:7,0,64	1/1:3,0:3:6.11:19,6,0	0/0:2,0:2:1.63:0,2,35	0/1:7,0:7:15.14:15,0,26	1/1:6,0:6:11.34:66,11,0	1/1:10,0:10:9.91:31,10,0	1/1:1,0:1:2.04:6,2,0	0/0:17,0:17:14.47:0,14,155	0/1:14,0:14:15.80:16,0,56	0/1:11,0:10:99:111,0,125	1/1:2,0:2:3.01:40,3,0	0/0:2,0:2:3.01:0,3,38	./.	./.	./.	1/1:16,0:16:24.63:77,25,0	0/1:9,0:9:9.95:10,0,126	0/1:8,0:8:10.04:10,0,28	1/1:8,0:8:14.26:45,14,0
chr10	35065684	.	GAGAA	G	1270.79	PASS	AB=0.962;AC=27;AF=0.519;AN=52;BaseQRankSum=4.217;DP=599;FS=1.705;HRun=0;HaplotypeScore=226.5621;InbreedingCoeff=-0.2047;MQ=34.03;MQ0=64;MQRankSum=-1.192;QD=2.67;ReadPosRankSum=3.973;VQSLOD=2.1719;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:24:2.42:0,2,122	1/1:7,0:6:11.28:122,11,0	./.	./.	0/1:28,0:28:6.11:28,0,6	0/1:19,1:19:26.63:143,0,27	0/0:12,0:10:2.69:0,3,32	0/1:27,0:21:25.22:25,0,59	1/1:18,0:18:12.61:76,13,0	0/1:31,0:29:26.83:27,0,105	0/1:21,0:20:27.16:27,0,68	0/0:31,0:24:22.24:0,22,171	0/1:22,12:30:16.26:36,0,16	0/1:18,0:16:27.31:91,0,27	1/1:27,0:26:2.03:90,2,0	0/1:26,0:20:2.26:41,0,2	0/1:18,0:13:6.97:7,0,11	0/1:17,0:15:46.55:47,0,96	0/1:13,0:11:34.15:34,0,35	0/1:21,0:18:14.68:29,0,15	1/1:10,0:8:3.61:17,4,0	0/1:18,0:15:17.59:70,0,18	0/0:18,0:12:8.87:0,9,63	0/0:32,0:26:24:0,24,260	1/1:23,3:24:31.93:269,32,0	0/1:33,0:30:6.37:6,0,172	1/1:38,0:35:14.29:160,14,0	0/1:16,9:24:55.55:84,0,56
chr10	35065686	.	GAA	G	1409.76	PASS	AB=0.967;AC=22;AF=0.407;AN=54;BaseQRankSum=9.495;DP=600;FS=0.000;HRun=3;HaplotypeScore=201.7570;InbreedingCoeff=-0.5832;MQ=35.57;MQ0=64;MQRankSum=-1.539;QD=2.82;ReadPosRankSum=3.763;VQSLOD=-0.2704;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:23,4:23:99:111,0,382	1/1:7,0:6:9.49:36,9,0	./.	0/0:3,0:1:1.82:0,2,5	0/1:23,7:30:40.62:41,0,92	0/1:21,0:20:96.14:100,0,96	0/0:11,0:9:3.14:0,3,94	0/0:26,0:20:18.66:0,19,254	0/1:12,6:18:35.04:90,0,35	0/1:32,0:30:97.75:98,0,179	0/1:21,0:20:35.67:36,0,155	0/1:30,1:24:65.46:65,0,120	0/1:34,0:30:56.60:79,0,57	0/1:18,0:16:21.58:22,0,195	0/1:27,0:26:51.03:157,0,51	0/1:24,0:18:48.74:49,0,122	0/1:17,1:13:29.99:30,0,54	0/0:17,0:15:10.08:0,10,209	0/1:12,0:10:21.23:38,0,21	0/1:21,0:18:34.47:34,0,111	0/0:10,0:8:14.08:0,14,116	0/1:18,0:15:37.96:80,0,38	0/1:19,0:13:23.21:23,0,41	0/0:33,0:27:13.83:0,14,274	0/1:26,0:24:99:137,0,158	0/1:33,0:30:99:100,0,254	0/1:37,0:34:99:115,0,144	0/1:26,0:25:26.92:123,0,27
chr10	35065690	.	G	GAA	4187.29	PASS	AB=0.942;AC=21;AF=0.375;AN=56;BaseQRankSum=10.875;DP=599;FS=8.959;HRun=3;HaplotypeScore=189.6024;InbreedingCoeff=-0.4939;MQ=35.17;MQ0=63;MQRankSum=-1.621;QD=9.22;ReadPosRankSum=1.890;VQSLOD=-0.1542;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:24:45.11:45,0,276	0/0:8,0:7:5.74:0,6,23	0/0:1,0:1:3.01:0,3,32	0/0:3,0:1:1.55:0,2,4	0/0:33,0:33:22.89:0,23,189	0/1:17,3:19:99:225,0,127	0/1:9,2:9:84.66:117,0,85	0/1:30,0:24:99:115,0,297	0/0:19,0:19:7.44:0,7,100	0/1:26,3:27:99:448,0,233	0/1:17,2:18:99:174,0,165	0/0:30,0:23:27.09:0,27,373	0/1:32,0:29:33.71:317,0,34	0/1:17,1:16:86.10:86,0,240	0/1:23,2:24:47.28:442,0,47	0/1:24,1:19:99:247,0,145	0/1:19,0:14:24.16:24,0,83	0/1:15,2:15:82.03:82,0,179	0/1:12,1:11:41.63:250,0,42	0/1:18,2:17:99:209,0,112	0/1:9,1:8:15.55:16,0,164	0/1:16,0:13:26.19:127,0,26	0/0:18,0:13:15.03:0,15,181	0/0:33,0:27:26.57:0,27,344	0/1:26,0:24:91.41:91,0,271	0/1:30,4:31:99:463,0,312	0/1:36,0:33:99:270,0,217	1/1:23,3:25:14.75:437,15,0
chr10	35065698	.	GAAAGAGAGAGAGAA	G	14383.47	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=4.458;DP=604;FS=8.785;HRun=0;HaplotypeScore=252.8467;InbreedingCoeff=-0.3647;MQ=41.99;MQ0=54;MQRankSum=-3.467;QD=27.98;ReadPosRankSum=7.786;VQSLOD=2.0653;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:26:99:844,0,107	1/1:1,7:7:8.82:369,9,0	0/0:4,0:3:7.85:0,8,77	0/1:6,0:4:3.10:3,0,75	1/1:33,0:33:28.73:774,29,0	0/1:23,0:22:39.79:532,0,40	0/1:12,0:10:31.53:303,0,32	0/1:28,0:23:51.08:565,0,51	1/1:18,0:18:27.02:575,27,0	0/1:29,0:27:57.36:1208,0,57	0/1:22,0:21:71.23:661,0,71	0/0:31,0:24:29.41:0,29,905	0/1:26,0:24:10.89:908,0,11	0/1:17,0:16:99:297,0,101	1/1:28,0:27:8.49:1152,8,0	0/1:26,0:22:99:728,0,139	0/1:20,0:15:34.52:227,0,35	0/1:20,0:18:99:211,0,206	0/1:13,0:12:21.14:589,0,21	0/1:22,0:19:48.41:635,0,48	0/1:11,0:9:22.89:23,0,45	1/1:11,0:10:7.48:325,7,0	0/0:20,0:15:29.82:0,30,558	0/0:35,0:29:36.58:0,37,943	0/1:22,0:21:99:340,0,140	0/1:34,0:32:64.90:1288,0,65	0/1:31,0:28:57.69:850,0,58	0/1:24,0:23:16.56:976,0,17
chr10	35065710	.	GAA	G	8964.17	PASS	AB=0.592;AC=37;AF=0.661;AN=56;BaseQRankSum=7.000;DP=564;FS=26.526;HRun=3;HaplotypeScore=154.2948;InbreedingCoeff=0.2710;MQ=54.24;MQ0=43;MQRankSum=-6.099;QD=20.10;ReadPosRankSum=8.347;VQSLOD=0.7234;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:10,17:26:63.52:510,0,64	1/1:8,0:7:11.78:146,12,0	0/0:13,0:10:16.91:0,17,236	0/0:18,0:15:15.61:0,16,317	0/1:9,30:39:83.34:304,0,83	1/1:1,16:16:27.04:298,27,0	1/1:2,12:12:17.96:183,18,0	1/1:4,25:26:75.07:886,75,0	0/1:4,12:16:99:146,0,123	1/1:3,20:21:60.14:766,60,0	1/1:1,19:19:37.83:435,38,0	0/0:34,0:27:41.92:0,42,640	1/1:7,13:19:42.12:503,42,0	0/1:1,7:8:32.94:194,0,33	1/1:2,27:28:54.12:642,54,0	0/1:6,17:20:34.76:423,0,35	0/1:9,11:16:99:116,0,155	0/1:8,11:18:83.74:191,0,84	1/1:3,13:14:21.09:437,21,0	1/1:8,10:16:25.73:462,26,0	1/1:4,2:4:6.01:69,6,0	1/1:1,10:10:18.04:221,18,0	0/0:24,0:19:45.04:0,45,613	0/0:29,0:25:39.08:0,39,673	0/1:3,7:9:63.11:215,0,63	1/1:2,25:26:22.87:874,23,0	1/1:6,19:23:35.93:480,36,0	0/1:7,14:20:6.31:466,0,6
chr10	35067055	.	C	CAA	7842.59	PASS	AB=0.770;AC=23;AF=0.411;AN=56;BaseQRankSum=18.940;DP=728;FS=3.446;HRun=3;HaplotypeScore=174.9487;InbreedingCoeff=-0.5550;MQ=54.05;MQ0=3;MQRankSum=-13.215;QD=13.43;ReadPosRankSum=-5.226;VQSLOD=-0.0984;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:75.25:0,75,1103	0/1:5,0:10:71.97:72,0,150	0/0:25,0:19:39.99:0,40,617	0/0:25,0:17:28.76:0,29,476	0/1:29,5:39:99:307,0,1005	0/1:20,10:32:99:608,0,575	0/1:20,4:24:99:204,0,737	0/1:25,7:26:99:415,0,358	0/1:17,6:26:99:389,0,562	0/1:20,5:31:99:374,0,658	0/1:27,8:41:99:534,0,843	0/0:22,0:22:66.11:0,66,902	0/1:14,7:22:99:366,0,419	0/1:23,6:30:99:328,0,684	0/1:16,9:27:99:493,0,554	0/1:11,6:19:99:352,0,384	0/1:16,1:21:99:122,0,551	0/1:23,6:31:99:337,0,618	0/1:18,2:22:99:207,0,492	0/1:25,5:33:99:297,0,851	0/1:8,1:9:26.71:27,0,304	0/1:18,4:23:99:173,0,660	0/0:27,0:27:81.27:0,81,1187	0/0:16,0:16:48.16:0,48,706	0/1:15,8:23:99:418,0,507	0/1:22,12:36:99:695,0,664	0/1:27,13:47:99:956,0,733	1/1:2,2:5:12:169,12,0
chr10	35067106	.	CT	C	11021.85	PASS	AB=0.542;AC=45;AF=0.804;AN=56;BaseQRankSum=8.360;DP=579;FS=5.139;HRun=9;HaplotypeScore=133.7874;InbreedingCoeff=0.9114;MQ=61.08;MQ0=0;MQRankSum=-4.401;QD=22.63;ReadPosRankSum=1.328;VQSLOD=3.6061;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,31:34:81.04:741,81,0	1/1:0,8:8:21.01:192,21,0	0/0:16,0:14:27.03:0,27,283	0/0:13,0:11:23.09:0,23,241	1/1:2,18:20:54.03:494,54,0	1/1:3,22:25:66.03:604,66,0	1/1:3,16:19:45.02:412,45,0	1/1:4,22:25:63.01:572,63,0	1/1:3,15:18:42.02:384,42,0	1/1:7,25:32:75.03:684,75,0	1/1:5,19:24:60.03:547,60,0	0/0:20,0:20:51.15:0,51,588	1/1:3,14:17:44.97:403,45,0	1/1:2,16:18:45.02:411,45,0	1/1:5,18:23:24.23:437,24,0	1/1:2,14:16:39.02:357,39,0	1/1:4,10:14:20.71:262,21,0	1/1:2,14:16:39.02:357,39,0	1/1:5,24:29:72.01:655,72,0	1/1:2,22:24:66.04:603,66,0	0/1:2,11:13:4.60:217,0,5	1/1:0,14:14:39.02:357,39,0	0/0:24,0:24:60.18:0,60,692	0/0:18,0:18:43.93:0,44,479	1/1:0,24:24:69.04:631,69,0	1/1:0,26:26:78.04:713,78,0	1/1:9,25:34:72.02:658,72,0	1/1:1,12:13:36.02:329,36,0
chr10	35068355	.	G	GA	10754.04	PASS	AB=0.804;AC=38;AF=0.679;AN=56;BaseQRankSum=-14.239;DP=623;FS=10.674;HRun=9;HaplotypeScore=64.6287;InbreedingCoeff=0.8431;MQ=84.41;MQ0=1;MQRankSum=-2.808;QD=24.44;ReadPosRankSum=0.372;VQSLOD=5.1547;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,30:37:58.17:869,58,0	0/0:14,0:14:38.95:0,39,331	0/0:24,0:24:41.46:0,41,339	0/1:14,0:14:9.23:9,0,108	0/0:41,0:41:92.96:0,93,805	1/1:2,14:17:44.92:466,45,0	1/1:2,17:19:48.13:531,48,0	1/1:7,25:32:76.39:797,76,0	0/0:13,0:13:35.98:0,36,313	1/1:1,16:17:51.12:554,51,0	1/1:4,14:18:12.99:345,13,0	0/0:26,0:26:74.95:0,75,643	1/1:3,17:20:39.11:431,39,0	1/1:3,13:16:39.11:431,39,0	1/1:5,20:25:54.15:597,54,0	1/1:6,26:32:69.19:763,69,0	0/0:25,0:25:62.98:0,63,547	1/1:0,19:19:57.15:631,57,0	1/1:5,17:23:53.20:621,53,0	1/1:3,25:28:63.09:670,63,0	0/1:6,11:17:16.01:296,0,16	1/1:1,18:19:51.98:552,52,0	0/0:19,0:19:47.97:0,48,417	0/0:21,0:21:59.86:0,60,510	1/1:7,16:23:22.07:468,22,0	1/1:2,19:21:57.14:622,57,0	1/1:2,17:19:40.65:435,41,0	1/1:1,22:23:60.16:664,60,0
chr10	35073003	.	T	TCTC	39375.79	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-10.263;DP=756;FS=3.259;HRun=0;HaplotypeScore=91.0370;InbreedingCoeff=0.9998;MQ=86.65;MQ0=0;MQRankSum=-11.960;QD=56.49;ReadPosRankSum=6.889;VQSLOD=7.0538;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,35:39:90.24:2049,90,0	1/1:0,16:16:42.14:962,42,0	0/0:33,0:33:77.71:0,78,1187	0/0:26,0:26:75.26:0,75,1244	1/1:5,22:27:63.17:1344,63,0	1/1:2,16:18:45.15:1032,45,0	1/1:3,26:30:69.24:1572,69,0	1/1:6,29:35:93.32:2033,93,0	1/1:5,29:35:75.26:1717,75,0	1/1:2,29:32:93.29:2000,93,0	1/1:1,12:15:33.11:741,33,0	1/1:3,30:34:78.27:1789,78,0	1/1:2,24:27:72.25:1650,72,0	1/1:3,26:30:87.25:1913,87,0	1/1:1,35:36:96.33:2201,96,0	1/1:0,32:32:87.30:1995,87,0	1/1:3,24:26:60.68:1377,61,0	1/1:4,23:27:57.20:1307,57,0	1/1:6,18:26:75.26:1591,75,0	1/1:1,26:27:75.26:1678,75,0	1/1:2,40:42:99:2330,102,0	1/1:3,15:18:39.13:869,39,0	1/1:3,18:23:51.18:1159,51,0	1/1:1,20:21:50.85:1170,51,0	1/1:2,17:19:39.13:894,39,0	1/1:1,16:19:57.20:1273,57,0	1/1:2,24:27:75.26:1698,75,0	1/1:0,15:15:45.15:1032,45,0
chr10	35073005	.	T	TCC	15773.68	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=7.344;DP=732;FS=2.687;HRun=1;HaplotypeScore=156.1742;InbreedingCoeff=0.9543;MQ=87.35;MQ0=0;MQRankSum=-8.750;QD=23.44;ReadPosRankSum=10.037;VQSLOD=2.5344;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:38,0:38:90.10:861,90,0	1/1:16,0:16:42.05:389,42,0	0/0:31,0:31:80.44:0,80,1162	0/0:28,0:28:78.26:0,78,1236	1/1:23,0:24:59.98:570,60,0	1/1:15,1:16:45.06:426,45,0	1/1:27,0:27:23.26:538,23,0	1/1:31,0:31:61.44:885,61,0	1/1:31,0:31:15.37:624,15,0	1/1:33,0:33:41.20:704,41,0	1/1:15,0:15:10:266,10,0	1/1:31,1:32:39.30:679,39,0	1/1:29,1:30:30.27:622,30,0	1/1:30,0:30:50.16:710,50,0	1/1:36,0:36:96.11:912,96,0	1/1:31,0:31:87.10:806,87,0	1/1:26,0:25:35.67:504,36,0	1/1:25,0:25:19.24:484,19,0	1/1:24,0:24:63.21:660,63,0	1/1:26,0:26:75.10:737,75,0	1/1:41,0:41:99:994,102,0	1/1:17,0:17:39.05:418,39,0	1/1:23,0:23:28.23:478,28,0	1/1:21,0:21:27.70:446,28,0	1/1:18,1:19:14.26:334,14,0	1/1:19,0:19:56.96:556,57,0	1/1:27,0:27:72.10:752,72,0	1/1:15,0:15:45.05:418,45,0
chr10	35073749	.	AC	A	2720.59	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=4.880;DP=722;FS=1.237;HRun=9;HaplotypeScore=84.1360;InbreedingCoeff=0.9866;MQ=64.48;MQ0=2;MQRankSum=2.306;QD=18.76;ReadPosRankSum=4.776;VQSLOD=3.9048;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,37:44:85.10:864,85,0	1/1:3,13:16:33.02:302,33,0	0/0:29,0:27:57:0,57,573	0/0:14,0:11:17.88:0,18,166	1/1:5,19:24:50.78:434,51,0	0/0:17,0:17:42.10:0,42,465	0/0:32,0:32:84.19:0,84,925	0/0:24,0:24:39.10:0,39,433	1/1:6,27:33:78.04:714,78,0	0/0:19,1:19:11.71:0,12,381	0/0:21,0:21:45.13:0,45,519	0/0:34,0:34:93.25:0,93,1051	0/0:22,0:22:60.17:0,60,683	0/0:31,0:31:69.20:0,69,794	0/0:28,1:29:53.73:0,54,832	0/0:30,0:29:56.25:0,56,842	1/1:2,25:28:65.06:582,65,0	0/0:22,0:22:54.16:0,54,622	0/0:19,1:19:15.94:0,16,425	0/0:20,0:20:51.12:0,51,568	0/0:42,0:42:99:0,108,1193	0/0:22,0:22:63.16:0,63,702	0/0:23,0:23:66.16:0,66,738	0/0:38,0:38:99:0,105,1179	0/0:18,0:18:48.12:0,48,542	0/0:30,2:32:23.19:0,23,717	0/0:26,0:25:69.18:0,69,777	0/0:11,0:11:30.06:0,30,326
chr10	35073896	.	A	AC	954.81	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.635;DP=721;FS=5.848;HRun=1;HaplotypeScore=105.0017;InbreedingCoeff=0.9971;MQ=78.19;MQ0=0;MQRankSum=-10.164;QD=21.70;ReadPosRankSum=1.492;VQSLOD=3.6946;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:87.26:0,87,1179	0/0:9,0:9:27.09:0,27,378	0/0:14,0:14:39.10:0,39,502	0/0:24,0:24:66.19:0,66,867	0/0:20,0:20:60.17:0,60,818	0/0:27,0:27:78.24:0,78,1071	0/0:30,0:30:87.29:0,87,1217	0/0:31,0:31:90.30:0,90,1259	0/0:29,0:29:87.27:0,87,1199	0/0:33,0:33:93.30:0,93,1288	0/0:17,0:17:48.16:0,48,663	1/1:3,21:25:74.84:697,75,0	0/0:32,0:32:96.31:0,96,1324	0/0:22,0:22:66.22:0,66,922	0/0:34,0:34:99:0,102,1396	0/0:34,0:34:96.32:0,96,1342	0/0:43,0:43:99:0,123,1703	0/0:30,0:30:90.30:0,90,1259	0/0:19,0:19:51.17:0,51,713	0/0:22,0:22:66.19:0,66,874	0/0:38,0:38:99:0,111,1529	0/0:30,0:30:87.28:0,87,1200	1/1:0,10:10:29.99:264,30,0	1/1:0,9:9:19.03:136,19,0	0/0:26,0:26:78.24:0,78,1069	0/0:30,0:30:90.29:0,90,1242	0/0:34,0:34:96.31:0,96,1327	0/0:19,0:19:57.07:0,57,670
chr10	35073897	.	A	AACCCACAGGTT	6879.28	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.395;DP=730;FS=0.538;HRun=0;HaplotypeScore=242.3625;InbreedingCoeff=0.9994;MQ=78.76;MQ0=0;MQRankSum=-11.158;QD=120.69;ReadPosRankSum=0.703;VQSLOD=4.9725;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:84.29:0,84,2823	0/0:9,0:9:27.09:0,27,978	0/0:15,0:15:39.13:0,39,1251	0/0:25,0:25:69.21:0,69,2194	0/0:19,0:19:57.20:0,57,2080	0/0:27,0:27:78.24:0,78,2721	0/0:30,0:30:90.30:0,90,3145	0/0:31,0:31:90.31:0,90,3093	0/0:28,0:28:84.29:0,84,3081	0/0:33,0:33:93.31:0,93,3191	0/0:17,0:17:48.16:0,48,1693	1/1:8,21:30:84.21:3987,84,0	0/0:32,0:32:96.33:0,96,3322	0/0:22,0:22:66.23:0,66,2225	0/0:34,0:34:99:0,102,3541	0/0:34,0:34:99:0,99,3472	0/0:44,0:44:99:0,129,4393	0/0:30,0:30:90.31:0,90,3170	0/0:20,0:20:54.19:0,54,1873	0/0:20,0:20:60.21:0,60,2044	0/0:36,0:36:99:0,108,3936	0/0:29,0:29:84.29:0,84,3000	1/1:1,10:11:33.07:1589,33,0	1/1:9,7:16:33.03:1303,33,0	0/0:26,0:26:78.27:0,78,2643	0/0:30,0:30:90.31:0,90,2970	0/0:34,0:34:99:0,102,3475	0/0:19,0:19:57.20:0,57,1649
chr10	35074385	.	G	GTGTC	1407.02	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-6.782;DP=714;FS=4.484;HRun=0;HaplotypeScore=119.4830;InbreedingCoeff=0.9988;MQ=82.89;MQ0=1;MQRankSum=-5.265;QD=41.38;ReadPosRankSum=0.807;VQSLOD=4.1639;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,27:34:57.20:1502,57,0	0/0:12,0:12:29.84:0,30,551	0/0:29,0:27:75.03:0,75,1141	0/0:28,0:25:52.63:0,53,726	0/0:21,0:21:60.21:0,60,1081	0/0:21,0:21:60.18:0,60,1064	0/0:33,0:33:93.32:0,93,1695	0/0:32,0:32:87.28:0,87,1563	0/0:28,0:28:75.21:0,75,1298	0/0:32,0:32:87.28:0,87,1521	0/0:11,0:11:33.08:0,33,545	0/0:29,0:29:87.30:0,87,1600	0/0:42,0:42:99:0,114,1990	0/0:27,0:27:69.24:0,69,1218	0/0:25,0:25:69.24:0,69,1261	0/0:15,0:15:39.13:0,39,718	0/0:30,0:30:87.26:0,87,1529	0/0:23,0:23:66.15:0,66,1123	0/0:23,0:23:63.22:0,63,1149	0/0:14,0:14:39.12:0,39,687	0/0:40,0:40:99:0,114,2044	0/0:18,0:18:39.13:0,39,702	0/0:20,0:20:57.18:0,57,1004	0/0:37,0:37:99:0,105,1890	0/0:30,0:30:87.27:0,87,1522	0/0:26,0:26:75.25:0,75,1345	0/0:22,0:22:66.23:0,66,1167	0/0:11,0:11:33.08:0,33,573
chr10	35075532	.	C	CT	2941.93	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=5.907;DP=661;FS=1.003;HRun=0;HaplotypeScore=71.9506;InbreedingCoeff=0.9999;MQ=87.53;MQ0=0;MQRankSum=-0.376;QD=40.86;ReadPosRankSum=2.564;VQSLOD=4.3909;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:99:0,99,1363	0/0:11,0:11:33.11:0,33,461	0/0:26,0:26:72.62:0,73,931	0/0:26,0:26:60.70:0,61,806	0/0:32,0:32:96.08:0,96,1279	0/0:16,0:16:45.13:0,45,610	0/0:26,0:26:72.21:0,72,966	0/0:21,0:21:60.18:0,60,794	0/0:26,0:24:69.23:0,69,963	0/0:23,0:23:60.02:0,60,774	0/0:16,0:16:48.14:0,48,650	1/1:0,29:29:84.23:1311,84,0	0/0:25,0:25:72.17:0,72,948	0/0:23,0:23:66.22:0,66,921	0/0:29,0:29:81.22:0,81,1108	0/0:18,0:18:54.15:0,54,714	0/0:31,0:30:90.24:0,90,1216	0/0:16,0:16:42.14:0,42,586	0/0:14,0:14:42.14:0,42,587	0/0:24,0:24:72.24:0,72,1006	0/0:34,0:34:99:0,99,1348	0/0:20,0:20:54.15:0,54,721	1/1:1,15:16:39.60:624,40,0	1/1:0,27:27:72.25:1150,72,0	0/0:32,0:32:96.30:0,96,1303	0/0:28,0:28:78.26:0,78,1090	0/0:22,0:21:54.14:0,54,723	0/0:17,0:17:51.15:0,51,694
chr10	35075651	.	TACACACAC	T	1471.27	PASS	AB=0.980;AC=17;AF=0.315;AN=54;BaseQRankSum=-0.495;DP=488;FS=4.560;HRun=0;HaplotypeScore=151.1623;InbreedingCoeff=0.3272;MQ=71.09;MQ0=7;MQRankSum=-0.495;QD=7.91;ReadPosRankSum=-0.191;VQSLOD=2.3101;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:23,3:30:15.51:279,16,0	0/0:8,0:9:13.55:0,14,275	0/0:36,0:25:0.89:0,1,2	0/0:35,0:25:3.01:0,3,61	1/1:9,3:12:2.99:24,3,0	0/1:20,0:21:16.87:17,0,118	0/0:22,0:22:2.60:0,3,10	0/1:29,0:29:8.95:9,0,81	1/1:12,6:19:33.57:722,34,0	0/1:17,0:17:51.75:52,0,191	0/0:11,0:11:0.06:0,0,0	1/1:8,0:10:9.03:155,9,0	0/1:17,0:18:19.14:19,0,159	0/0:13,0:12:5.98:0,6,107	0/0:20,0:19:20.76:0,21,197	0/0:17,0:17:16.56:0,17,186	1/1:11,3:14:9.03:218,9,0	0/0:16,0:16:18.03:0,18,266	0/0:14,0:14:7.57:0,8,101	0/0:13,0:13:15:0,15,195	0/0:18,0:16:3.01:0,3,70	0/0:18,0:17:5.27:0,5,115	./.	1/1:7,0:10:5.99:54,6,0	0/0:16,0:16:9.03:0,9,149	0/0:23,0:23:2.64:0,3,412	0/0:10,0:10:11.97:0,12,158	0/1:6,0:6:87:87,0,109
chr10	35075683	.	CACACACACAG	C	1353.47	PASS	AB=1.000;AC=15;AF=0.278;AN=54;BaseQRankSum=-0.086;DP=476;FS=0.764;HRun=0;HaplotypeScore=141.5129;InbreedingCoeff=0.4952;MQ=38.90;MQ0=27;MQRankSum=-0.111;QD=9.53;ReadPosRankSum=-0.618;VQSLOD=2.3206;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:27:15.98:244,16,0	0/0:12,0:12:9.78:0,10,396	0/0:25,0:4:8.94:0,9,70	0/0:20,0:2:6.01:0,6,86	1/1:15,4:15:2.99:24,3,0	0/0:19,0:19:1.68:0,2,161	0/0:21,0:20:1.47:0,1,8	0/0:26,0:25:42.39:0,42,705	1/1:18,2:16:35.38:823,35,0	0/1:18,0:18:3.53:4,0,449	0/0:9,0:9:0.04:0,0,0	1/1:9,0:8:5.41:34,5,0	0/1:17,0:14:17.42:17,0,253	0/0:17,0:16:7.03:0,7,119	0/0:28,0:27:24.41:0,24,285	0/0:19,0:19:22.72:0,23,309	1/1:14,1:13:9.03:228,9,0	0/0:14,0:12:23.92:0,24,399	0/0:12,0:11:25.35:0,25,285	0/0:15,0:14:14.65:0,15,257	0/0:20,0:14:3.48:0,3,93	0/0:20,0:18:11.80:0,12,186	./.	1/1:10,0:7:5.55:54,6,0	0/0:18,0:17:8.36:0,8,186	0/0:22,0:22:15.76:0,16,624	0/0:13,0:13:17.68:0,18,340	0/1:5,0:5:87:87,0,156
chr10	35075701	.	GA	G	519.79	PASS	AB=0.941;AC=14;AF=0.259;AN=54;BaseQRankSum=0.892;DP=475;FS=2.307;HRun=1;HaplotypeScore=121.0378;InbreedingCoeff=-0.1575;MQ=31.59;MQ0=41;MQRankSum=-0.880;QD=2.52;ReadPosRankSum=0.259;VQSLOD=-0.4581;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:22:11.87:62,0,12	0/1:10,0:10:19.16:19,0,102	0/0:22,0:3:9.03:0,9,124	0/0:15,0:1:3.01:0,3,43	0/1:11,14:19:18.63:30,0,19	0/0:20,0:17:2.51:0,3,7	0/0:25,0:24:4.41:0,4,28	0/0:27,0:23:30.17:0,30,290	1/1:7,12:15:29.02:315,29,0	0/0:14,0:14:16.37:0,16,173	0/0:4,0:4:0:0,0,0	0/0:12,0:9:14.78:0,15,116	0/1:12,0:9:25.66:26,0,40	0/1:15,0:15:3.57:4,0,21	0/0:27,0:25:9.43:0,9,95	0/1:20,0:19:34.63:35,0,49	0/1:7,8:11:24.34:119,0,24	0/1:10,0:6:5.52:6,0,51	0/0:13,0:12:17.36:0,17,180	0/0:20,0:15:8.28:0,8,101	0/0:21,0:14:3:0,3,25	0/0:23,0:21:4.23:0,4,26	./.	0/1:12,0:9:6.21:6,0,24	0/0:22,0:20:7.84:0,8,47	0/1:23,0:22:10.67:11,0,124	0/1:14,0:14:28.20:28,0,48	0/1:7,0:6:1.90:2,0,33
chr10	35075702	.	A	AG	1109.92	PASS	AB=0.953;AC=32;AF=0.593;AN=54;BaseQRankSum=0.706;DP=480;FS=14.493;HRun=7;HaplotypeScore=136.6340;InbreedingCoeff=0.0631;MQ=30.97;MQ0=43;MQRankSum=0.937;QD=2.94;ReadPosRankSum=1.185;VQSLOD=-0.0439;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:16,7:23:19.29:67,0,19	0/1:11,0:11:2.36:41,0,2	0/0:22,0:3:8.98:0,9,78	0/0:15,0:1:3:0,3,29	0/1:26,1:22:23.19:28,0,23	1/1:20,0:17:2.29:12,2,0	0/1:26,0:25:4.16:4,0,16	0/1:24,0:23:24.42:65,0,24	1/1:20,0:16:23.82:146,24,0	0/1:14,0:14:6.08:70,0,6	0/0:4,0:4:0.32:0,0,1	0/0:12,0:9:11.89:0,12,89	0/1:12,0:9:4.42:30,0,4	1/1:13,1:14:4.52:14,5,0	1/1:26,0:25:12.68:78,13,0	1/1:17,0:17:11.43:89,11,0	0/1:15,0:11:13.05:69,0,13	0/1:8,1:7:14.41:65,0,14	1/1:12,0:11:4.46:116,4,0	0/0:19,0:15:0.70:0,1,25	1/1:21,0:13:2.97:21,3,0	0/0:22,0:21:0.46:0,0,1	./.	0/1:7,0:9:7.48:9,0,7	1/1:21,0:19:8.02:33,8,0	1/1:21,0:22:29.47:210,29,0	1/1:13,0:14:11.70:64,12,0	1/1:6,0:7:6.87:32,7,0
chr10	35075703	.	G	GAGAGA	4067.08	PASS	AB=0.870;AC=35;AF=0.648;AN=54;BaseQRankSum=-4.351;DP=443;FS=5.328;HRun=0;HaplotypeScore=127.2550;InbreedingCoeff=0.3699;MQ=30.97;MQ0=45;MQRankSum=1.745;QD=12.75;ReadPosRankSum=1.009;VQSLOD=2.9282;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:20:19.37:0,19,106	0/1:9,0:9:9.68:10,0,15	0/0:22,0:3:9.03:0,9,208	0/0:15,0:1:3.01:0,3,69	0/1:28,0:22:6.50:7,0,25	0/1:4,7:15:8.74:46,0,9	0/0:6,1:24:3.41:0,3,39	1/1:17,0:17:39.05:581,39,0	0/0:20,0:16:26.16:0,26,288	1/1:0,7:12:28.29:460,28,0	0/0:2,1:3:0:0,0,0	0/0:12,0:8:4.12:0,4,35	0/1:8,0:8:10.44:168,0,10	1/1:2,8:13:3.88:55,4,0	1/1:5,10:21:10.78:196,11,0	1/1:4,11:15:14.59:216,15,0	0/1:15,0:11:23.44:23,0,71	1/1:8,0:6:11.82:241,12,0	1/1:3,9:12:33.06:620,33,0	1/1:13,0:13:9.76:134,10,0	1/1:8,1:11:2.96:19,3,0	1/1:10,0:20:1.71:4,2,0	./.	1/1:12,0:9:6.85:73,7,0	1/1:2,12:16:2.86:67,3,0	1/1:6,9:19:45.59:766,46,0	1/1:5,7:14:17.38:288,17,0	1/1:8,0:6:5.95:93,6,0
chr10	35075706	.	G	GA	246.53	PASS	AB=0.972;AC=24;AF=0.444;AN=54;BaseQRankSum=3.125;DP=430;FS=4.464;HRun=0;HaplotypeScore=121.0220;InbreedingCoeff=-0.1838;MQ=28.20;MQ0=48;MQRankSum=-0.540;QD=0.76;ReadPosRankSum=-0.468;VQSLOD=2.1652;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:22:1.72:2,0,67	0/1:9,0:9:4.81:5,0,57	0/0:22,0:3:9.03:0,9,123	0/0:15,0:1:3.01:0,3,42	0/1:30,0:24:6.42:6,0,18	0/1:12,2:11:11.17:11,0,15	0/1:21,2:22:20.63:24,0,21	0/1:23,0:19:3.09:3,0,139	0/1:21,0:16:3.70:4,0,34	0/1:8,0:8:26.63:29,0,27	0/1:4,0:4:0:0,0,0	0/0:11,0:7:10.28:0,10,60	0/1:8,1:7:7.89:8,0,26	0/1:12,0:11:0.04:7,0,0	1/1:20,1:20:2.25:47,2,0	1/1:15,0:14:5.52:55,6,0	0/1:13,1:10:15.62:24,0,16	0/1:9,0:6:7.83:15,0,8	0/0:13,0:11:10.47:0,10,74	0/0:17,1:13:1.16:0,1,25	0/1:16,0:8:0.02:0,0,0	0/0:22,0:18:5.76:0,6,20	./.	1/1:12,0:9:1.03:4,1,0	0/1:15,0:13:0.89:1,0,5	0/1:19,0:18:27.38:75,0,27	0/1:12,1:14:45.97:54,0,46	0/1:12,0:9:1.49:1,0,57
chr10	35075720	.	G	GA	403.77	PASS	AB=0.933;AC=19;AF=0.365;AN=52;BaseQRankSum=0.666;DP=579;FS=32.909;HRun=0;HaplotypeScore=147.8459;InbreedingCoeff=-0.3355;MQ=36.05;MQ0=57;MQRankSum=4.509;QD=1.13;ReadPosRankSum=-0.364;VQSLOD=1.3464;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:0.16:0,0,54	0/1:10,1:11:26.94:27,0,74	./.	./.	0/0:29,0:25:12.27:0,12,99	0/1:21,2:20:19.96:20,0,46	0/1:21,3:24:14.95:15,0,70	0/0:29,0:24:16.47:0,16,536	0/0:27,0:21:24.30:0,24,255	0/1:14,0:14:63.97:64,0,121	0/1:11,0:11:13.67:31,0,14	0/0:14,0:10:17.83:0,18,136	0/1:15,1:13:28.18:28,0,132	1/1:15,0:15:9.76:62,10,0	0/1:28,1:28:42.66:43,0,73	0/1:17,2:19:21.89:23,0,22	0/1:12,0:9:11.95:21,0,12	0/0:10,0:8:7.40:0,7,82	0/0:16,0:14:31.51:0,32,335	0/1:33,1:29:13.78:76,0,14	0/1:24,0:15:5.10:15,0,5	0/1:36,0:32:18.69:19,0,39	1/1:8,0:7:1.80:5,2,0	0/0:13,0:9:3.22:0,3,13	0/1:22,0:20:19.81:28,0,20	0/1:36,0:35:50.21:50,0,366	0/1:12,4:16:24.18:24,0,143	0/0:20,1:16:0.31:0,0,221
chr10	35075774	.	AT	A	1371.27	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=6.440;DP=610;FS=3.843;HRun=1;HaplotypeScore=108.9469;InbreedingCoeff=0.9990;MQ=80.68;MQ0=3;MQRankSum=-2.727;QD=33.45;ReadPosRankSum=-0.076;VQSLOD=3.2230;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:69.23:0,69,1079	0/0:10,0:9:27.09:0,27,432	0/0:19,0:17:36.12:0,36,566	0/0:34,0:28:44.37:0,44,914	0/0:23,0:23:57.19:0,57,889	0/0:26,0:26:66.23:0,66,1055	0/0:24,0:24:60.20:0,60,940	0/0:46,0:46:99:0,138,2181	0/0:21,0:21:51.17:0,51,815	0/0:20,0:20:60.20:0,60,959	0/0:14,0:14:42.14:0,42,671	1/1:0,15:15:45.15:619,45,0	0/0:18,0:18:48.16:0,48,756	0/0:17,0:17:42.14:0,42,668	0/0:30,0:30:81.28:0,81,1292	0/0:21,0:21:59.88:0,60,949	0/0:18,0:18:48.16:0,48,767	0/0:12,0:12:27.09:0,27,431	0/0:17,0:17:51.17:0,51,805	0/0:18,0:18:54.14:0,54,814	0/0:26,0:24:57.19:0,57,902	0/0:27,0:27:78.25:0,78,1221	1/1:0,15:15:39.13:542,39,0	1/1:0,11:11:29.97:353,30,0	0/0:19,0:19:54.18:0,54,853	0/0:35,0:35:99:0,102,1590	0/0:22,0:22:60.20:0,60,946	0/0:22,0:22:66.22:0,66,1045
chr10	35076554	.	AG	A	1882.69	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=2.019;DP=665;FS=0.000;HRun=2;HaplotypeScore=118.8091;InbreedingCoeff=0.9990;MQ=83.22;MQ0=0;MQRankSum=-2.822;QD=32.46;ReadPosRankSum=3.050;VQSLOD=3.2588;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,117,1725	0/0:9,0:9:23.69:0,24,359	0/0:21,0:21:60.10:0,60,860	0/0:22,0:22:60.25:0,60,826	0/0:15,0:15:45.13:0,45,653	0/0:18,0:18:54.18:0,54,806	0/0:42,0:42:99:0,120,1741	0/0:34,0:34:99:0,102,1491	0/0:26,0:26:75.25:0,75,1119	0/0:22,0:22:66.21:0,66,951	0/0:11,0:11:30.09:0,30,432	1/1:0,21:21:54.18:701,54,0	0/0:25,0:25:75.24:0,75,1099	0/0:19,0:19:54.18:0,54,805	0/0:24,0:24:72.23:0,72,1055	0/0:35,0:35:99:0,105,1568	0/0:25,0:25:72.23:0,72,1058	0/0:27,0:27:81.23:0,81,1159	0/0:21,0:21:63.20:0,63,919	0/0:17,0:17:51.17:0,51,764	0/0:40,0:40:99:0,120,1799	0/0:20,0:20:60.20:0,60,899	1/1:0,14:14:39.13:506,39,0	1/1:1,22:23:63.20:818,63,0	0/0:27,0:26:81.26:0,81,1181	0/0:29,0:29:87.29:0,87,1294	0/0:22,0:22:63.21:0,63,937	0/0:16,0:16:48.16:0,48,693
chr10	35079509	.	G	GA	19941.90	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-11.119;DP=686;FS=2.316;HRun=4;HaplotypeScore=64.9539;InbreedingCoeff=0.9936;MQ=88.56;MQ0=0;MQRankSum=-6.602;QD=35.42;ReadPosRankSum=5.122;VQSLOD=5.1365;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,41:44:99:1558,114,0	0/0:8,0:8:16.45:0,16,89	0/0:25,0:25:54.60:0,55,647	0/0:30,0:30:37.31:0,37,664	0/0:32,0:32:93.23:0,93,1033	1/1:2,15:17:45.15:615,45,0	1/1:2,19:21:45.15:615,45,0	1/1:3,33:36:99:1295,99,0	1/1:2,27:29:75.25:1025,75,0	1/1:1,16:17:45.11:567,45,0	1/1:0,20:20:60.07:774,60,0	1/1:2,27:29:81.27:1106,81,0	1/1:1,31:32:84.28:1146,84,0	1/1:1,22:23:54.18:738,54,0	1/1:1,28:29:78.26:1056,78,0	1/1:0,29:29:75.25:1025,75,0	0/0:28,0:28:69.19:0,69,782	1/1:2,16:18:45.15:615,45,0	1/1:2,16:18:48.15:639,48,0	1/1:1,20:21:60.15:798,60,0	1/1:0,19:19:54.18:738,54,0	1/1:3,27:30:81.27:1102,81,0	1/1:0,18:18:51.17:697,51,0	1/1:3,27:30:72.24:984,72,0	1/1:0,24:24:63.21:861,63,0	1/1:0,20:20:60.15:798,60,0	1/1:5,28:32:72.24:983,72,0	1/1:0,6:6:15.05:205,15,0
chr10	35080300	.	TTCCATCCATCCA	T	22505.51	PASS	AB=1.000;AC=43;AF=0.768;AN=56;BaseQRankSum=7.354;DP=737;FS=6.268;HRun=0;HaplotypeScore=301.0978;InbreedingCoeff=0.4730;MQ=62.41;MQ0=3;MQRankSum=-7.182;QD=39.07;ReadPosRankSum=6.450;VQSLOD=3.0813;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:17.77:0,18,234	1/1:0,0:8:9.03:244,9,0	0/0:41,0:32:42.14:0,42,1462	0/0:50,0:38:47.86:0,48,1761	0/0:25,0:25:20.88:0,21,246	1/1:7,12:19:42.14:1319,42,0	1/1:16,7:23:30.10:791,30,0	1/1:27,0:27:36.12:689,36,0	0/1:32,0:32:99:355,0,206	1/1:20,15:35:72.25:2187,72,0	1/1:12,7:19:30.10:968,30,0	0/1:36,0:36:73.60:414,0,74	1/1:15,15:30:57.18:1676,57,0	1/1:19,13:32:57.20:1674,57,0	1/1:13,17:30:69.24:2023,69,0	1/1:10,17:27:63.21:1905,63,0	0/1:26,0:27:61.08:61,0,152	1/1:9,1:10:12.04:279,12,0	1/1:13,5:18:24.08:700,24,0	1/1:3,6:9:15.05:469,15,0	1/1:26,4:29:8.99:182,9,0	1/1:18,13:31:48.16:1311,48,0	0/1:29,0:29:29.63:293,0,30	0/1:25,0:25:51.36:51,0,62	1/1:17,12:29:42.14:1297,42,0	1/1:10,10:19:45.15:1338,45,0	1/1:7,9:16:39.12:1099,39,0	1/1:4,10:14:42.11:1181,42,0
chr10	35080327	.	CATCCATCTGTCCGTCCATCCATCCATCCATCT	C	6251.99	PASS	AB=0.753;AC=16;AF=0.286;AN=56;BaseQRankSum=-3.006;DP=756;FS=3.364;HRun=0;HaplotypeScore=554.8930;InbreedingCoeff=0.6170;MQ=44.79;MQ0=24;MQRankSum=-2.792;QD=23.16;ReadPosRankSum=-0.115;VQSLOD=1.0540;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:1,45:46:59.77:164,0,60	1/1:8,0:8:9.03:217,9,0	0/0:42,0:15:45.15:0,45,1966	0/0:52,0:30:84.01:0,84,3516	1/1:0,31:31:26.01:439,26,0	0/0:22,0:22:55.18:0,55,1227	0/0:23,0:23:31.80:0,32,1230	0/0:30,0:27:60.87:0,61,1684	1/1:1,35:36:3.85:1788,4,0	0/0:34,0:34:22.10:0,22,1808	0/0:23,0:23:13.36:0,13,1010	1/1:0,31:31:18.06:1521,18,0	0/0:33,0:32:76.60:0,77,1652	0/0:27,0:27:28.48:0,28,1081	0/0:37,0:37:55.70:0,56,1622	0/0:30,0:30:81.62:0,82,1674	0/1:1,34:35:24.35:250,0,24	0/0:10,0:10:15.05:0,15,558	0/0:24,0:21:51.97:0,52,1399	0/0:11,0:11:26.29:0,26,692	0/0:35,0:33:22.41:0,22,805	0/1:21,0:21:7.95:8,0,1105	1/1:0,28:28:20.81:1558,21,0	1/1:1,21:22:6.02:304,6,0	0/0:16,0:16:19.25:0,19,568	0/0:19,0:19:51.43:0,51,922	0/0:17,0:17:47.22:0,47,883	0/1:12,0:12:1.87:2,0,576
chr10	35080344	.	ATC	A	223.43	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=7.492;DP=825;FS=61.596;HRun=0;HaplotypeScore=284.6171;InbreedingCoeff=-0.1832;MQ=54.08;MQ0=20;MQRankSum=-8.765;QD=0.46;ReadPosRankSum=7.439;VQSLOD=0.6316;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:6.02:0,6,103	0/0:13,0:13:19.39:0,19,417	0/0:41,0:15:45.06:0,45,743	0/0:56,0:37:99:0,105,1890	0/0:31,0:31:9.50:0,9,146	0/1:24,0:24:27.38:27,0,66	0/1:29,0:29:19.07:22,0,19	0/0:41,0:38:36.18:0,36,517	0/1:35,0:35:13.68:14,0,100	0/0:33,0:33:33.47:0,33,239	0/1:20,0:20:4.67:5,0,42	1/1:31,0:31:11.68:64,12,0	0/1:40,0:39:17.35:17,0,37	0/1:29,0:29:18.06:21,0,18	0/1:40,0:40:34.27:41,0,34	0/1:37,0:36:2.08:2,0,109	1/1:34,0:34:2.80:13,3,0	1/1:12,1:13:3.60:27,4,0	0/1:24,0:23:30.81:31,0,297	0/0:15,0:15:10.42:0,10,87	0/0:37,3:38:17.94:0,18,99	0/1:23,0:23:5.80:6,0,33	0/1:28,0:28:9.22:9,0,83	0/0:22,0:22:4.56:0,5,45	0/1:20,0:20:11.89:12,0,58	0/1:20,0:20:20.15:20,0,76	0/1:22,0:22:35.24:37,0,35	0/1:18,0:18:12.88:14,0,13
chr10	35080355	.	CATCT	C	17639.93	PASS	AB=1.000;AC=50;AF=0.893;AN=56;BaseQRankSum=4.222;DP=814;FS=29.263;HRun=0;HaplotypeScore=227.6676;InbreedingCoeff=0.6624;MQ=64.81;MQ0=5;MQRankSum=-7.963;QD=23.93;ReadPosRankSum=5.779;VQSLOD=3.0349;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:46,0:46:13.91:14,0,27	0/1:13,0:13:0.16:0,0,160	0/0:28,0:18:33.38:0,33,820	0/0:49,0:42:99:0,102,2325	1/1:31,0:31:15.50:91,16,0	1/1:1,26:27:32.96:913,33,0	1/1:2,28:30:50.68:1044,51,0	1/1:0,46:46:99:1815,131,0	1/1:35,0:35:21.16:178,21,0	1/1:0,34:34:99:1610,99,0	1/1:1,17:18:38.70:768,39,0	1/1:31,0:31:18.02:212,18,0	1/1:0,35:35:68.46:1365,68,0	1/1:0,32:32:45.15:906,45,0	1/1:1,35:37:72.03:1467,72,0	1/1:1,36:37:71.66:1319,72,0	1/1:34,0:34:3.01:37,3,0	1/1:1,13:14:21.03:410,21,0	1/1:2,21:22:56.85:798,57,0	1/1:1,14:15:32.63:465,33,0	1/1:5,37:41:35.60:626,36,0	1/1:2,22:24:44.57:876,45,0	1/1:29,0:29:17.94:152,18,0	1/1:22,0:22:5.71:32,6,0	1/1:1,23:24:16.75:403,17,0	1/1:1,18:19:56.64:890,57,0	1/1:1,19:20:38.49:714,38,0	1/1:0,19:19:30.03:535,30,0
chr10	35081341	.	C	CTGTGTGTGTG	14243.92	PASS	AB=0.933;AC=46;AF=0.852;AN=54;BaseQRankSum=-2.456;DP=705;FS=24.514;HRun=0;HaplotypeScore=249.9602;InbreedingCoeff=0.5190;MQ=56.50;MQ0=7;MQRankSum=-2.937;QD=23.98;ReadPosRankSum=1.524;VQSLOD=2.6437;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:32:11.87:110,0,12	1/1:8,1:10:11.83:539,12,0	0/0:43,0:18:15.02:0,15,359	0/0:38,0:22:9.03:0,9,155	0/0:14,0:14:0.89:0,1,2	1/1:17,2:21:15.05:629,15,0	1/1:32,4:39:34.54:1214,35,0	1/1:28,0:27:29.36:582,29,0	1/1:21,0:21:3.01:56,3,0	1/1:20,7:28:45.14:1459,45,0	1/1:14,0:16:6.49:216,6,0	1/1:36,0:35:12.02:216,12,0	1/1:15,7:23:25.25:929,25,0	1/1:23,1:25:18.06:754,18,0	1/1:26,5:33:15.05:689,15,0	1/1:20,7:29:24.08:1137,24,0	1/1:22,0:22:9.03:307,9,0	1/1:20,6:28:22.63:988,23,0	1/1:26,0:25:18.05:500,18,0	0/1:11,1:13:0:0,0,0	1/1:23,8:33:9.43:183,9,0	1/1:11,6:17:9.03:389,9,0	./.	1/1:24,0:23:2.65:42,3,0	1/1:26,2:31:9.03:380,9,0	1/1:25,0:28:54.19:1976,54,0	1/1:12,4:17:18.06:681,18,0	1/1:8,0:8:6.02:268,6,0
chr10	35081863	.	A	AAGAT	4788.71	PASS	AB=0.799;AC=20;AF=0.400;AN=50;BaseQRankSum=-7.325;DP=601;FS=0.556;HRun=0;HaplotypeScore=104.3920;InbreedingCoeff=0.3343;MQ=67.89;MQ0=11;MQRankSum=-1.092;QD=15.25;ReadPosRankSum=-1.267;VQSLOD=4.2226;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:23,9:34:99:318,0,132	1/1:12,1:15:15.05:267,15,0	./.	./.	1/1:18,12:32:27.09:622,27,0	0/1:11,8:19:63.12:457,0,63	0/0:21,0:22:9.02:0,9,118	./.	1/1:10,10:21:21.07:484,21,0	0/1:21,0:22:52.88:53,0,148	0/0:14,0:14:18.06:0,18,271	0/0:24,0:24:18.05:0,18,250	1/1:11,1:21:24.08:424,24,0	0/0:6,0:10:9.01:0,9,84	0/0:9,0:17:23.94:0,24,210	0/0:21,0:23:30.09:0,30,417	0/1:14,11:24:25.76:327,0,26	0/0:9,0:20:21.02:0,21,194	0/1:11,7:16:21.04:413,0,21	0/1:13,7:20:3.80:394,0,4	1/1:11,6:18:18.06:415,18,0	0/1:22,1:24:33.83:34,0,359	0/0:16,0:16:21.07:0,21,316	0/0:21,0:23:21.06:0,21,298	0/0:26,0:29:51.15:0,51,713	0/1:14,4:18:55.87:184,0,56	1/1:24,2:27:18.06:398,18,0	0/0:17,0:18:27.08:0,27,389
chr10	35087254	.	C	CT	28131.91	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-9.733;DP=757;FS=5.862;HRun=1;HaplotypeScore=67.6612;InbreedingCoeff=0.9902;MQ=86.55;MQ0=0;MQRankSum=-10.738;QD=39.73;ReadPosRankSum=5.495;VQSLOD=5.2321;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,38:40:99:1592,108,0	1/1:0,10:10:27.09:403,27,0	0/0:20,0:20:37.64:0,38,607	0/0:29,0:29:69.16:0,69,834	1/1:2,23:25:66.18:962,66,0	1/1:1,19:20:39.13:584,39,0	1/1:0,44:44:99:1708,114,0	1/1:2,24:26:72.20:1006,72,0	1/1:0,32:32:90.30:1346,90,0	1/1:0,29:29:87.27:1272,87,0	1/1:0,8:8:15.05:225,15,0	1/1:2,41:43:99:1798,120,0	1/1:0,25:25:60.20:899,60,0	1/1:0,30:30:84.28:1259,84,0	1/1:0,27:27:72.24:1079,72,0	1/1:0,22:22:60.20:899,60,0	1/1:1,33:34:93.30:1372,93,0	1/1:4,25:29:78.26:1164,78,0	1/1:1,24:25:72.20:1036,72,0	1/1:0,9:9:27.09:404,27,0	1/1:2,87:89:99:3455,232,0	1/1:0,15:15:36.12:539,36,0	1/1:0,10:10:27.09:405,27,0	1/1:1,36:37:93.32:1393,93,0	1/1:0,19:19:54.11:782,54,0	1/1:0,28:28:84.22:1159,84,0	1/1:0,18:18:54.18:807,54,0	1/1:1,13:14:39.13:584,39,0
chr10	35089689	.	CCCTGA	C	2364.71	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.357;DP=755;FS=23.112;HRun=0;HaplotypeScore=143.1981;InbreedingCoeff=0.9985;MQ=78.77;MQ0=0;MQRankSum=-1.784;QD=33.78;ReadPosRankSum=2.857;VQSLOD=1.6575;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,135,3841	0/0:17,0:17:51.17:0,51,1540	0/0:18,0:18:48.15:0,48,1337	0/0:22,0:22:59.26:0,59,1550	0/0:23,0:23:63.22:0,63,1971	0/0:17,0:17:51.17:0,51,1466	0/0:23,0:23:63.22:0,63,1974	0/0:40,0:40:99:0,108,3243	0/0:26,0:26:75.26:0,75,2340	0/0:31,0:31:90.31:0,90,2794	0/0:22,0:22:66.23:0,66,2042	1/1:5,23:28:66.23:1358,66,0	0/0:27,0:27:81.28:0,81,2514	0/0:25,0:25:69.24:0,69,2132	0/0:22,0:22:66.23:0,66,2059	0/0:30,0:30:87.30:0,87,2655	0/0:40,0:40:99:0,120,3697	0/0:23,0:23:69.24:0,69,2106	0/0:24,0:24:57.17:0,57,1681	0/0:20,0:20:51.16:0,51,1493	0/0:47,0:47:99:0,141,4338	0/0:24,0:24:72.23:0,72,2136	1/1:4,18:22:21.07:445,21,0	1/1:3,17:20:33.11:703,33,0	0/0:23,0:23:69.24:0,69,2151	0/0:44,0:44:99:0,129,3773	0/0:25,0:25:75.26:0,75,2348	0/0:22,0:22:66.23:0,66,1872
chr10	35092082	.	CAGG	C	972.84	PASS	AB=0.992;AC=19;AF=0.339;AN=56;BaseQRankSum=2.710;DP=610;FS=20.842;HRun=0;HaplotypeScore=142.2107;InbreedingCoeff=-0.1724;MQ=76.35;MQ0=4;MQRankSum=-1.707;QD=2.53;ReadPosRankSum=-3.668;VQSLOD=0.0104;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:60.20:0,60,1071	0/0:8,0:8:15.03:0,15,180	0/0:37,0:27:29.39:0,29,674	0/0:17,0:15:26.89:0,27,472	0/0:15,0:15:42.13:0,42,727	0/1:15,0:15:10.69:11,0,42	0/1:23,0:23:2.39:29,0,2	0/1:28,0:28:19.54:20,0,70	0/0:17,0:17:48.15:0,48,781	0/1:27,0:27:31.07:68,0,31	0/1:19,0:19:38.21:38,0,41	0/0:22,0:22:63.21:0,63,1349	0/1:23,0:23:38.21:52,0,38	0/1:24,1:25:13.95:124,0,14	0/1:32,0:32:19.81:20,0,35	0/1:20,0:20:18.11:18,0,128	0/0:23,0:23:69.20:0,69,1097	0/1:25,0:25:19.71:44,0,20	1/1:21,0:21:5.38:116,5,0	0/1:20,0:20:50.60:129,0,51	0/1:25,0:25:53.06:101,0,53	0/1:17,1:18:60.35:76,0,60	0/0:19,0:19:57.18:0,57,1178	0/0:33,0:33:93.27:0,93,1983	1/1:12,2:14:24.63:154,25,0	0/1:29,1:30:55.57:126,0,56	0/1:20,0:19:15.18:15,0,76	0/0:10,0:10:11:0,11,64
chr10	35092088	.	GA	G	4505.55	PASS	AB=0.633;AC=36;AF=0.643;AN=56;BaseQRankSum=7.696;DP=634;FS=0.000;HRun=14;HaplotypeScore=112.3143;InbreedingCoeff=0.1647;MQ=76.66;MQ0=4;MQRankSum=-1.517;QD=9.07;ReadPosRankSum=4.853;VQSLOD=3.9986;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:11,14:26:37.79:153,0,38	1/1:0,1:7:10.70:44,11,0	0/0:36,2:25:3.06:0,3,115	0/0:17,0:15:11.65:0,12,87	0/1:6,9:15:28.97:117,0,29	1/1:5,10:15:23.67:162,24,0	1/1:10,18:29:22.29:269,22,0	0/1:9,20:31:1.30:258,0,1	1/1:7,9:17:0.90:142,1,0	1/1:15,12:27:7.44:162,7,0	0/1:8,12:20:17.35:148,0,17	0/0:22,0:22:40.82:0,41,350	1/1:11,11:23:9.78:202,10,0	1/1:12,15:27:45.51:293,46,0	1/1:14,20:36:59.83:412,60,0	0/1:10,10:21:75.43:131,0,75	1/1:4,17:22:52.29:371,52,0	1/1:5,20:25:47.50:328,47,0	1/1:7,12:21:31.10:246,31,0	0/1:7,8:16:21.87:142,0,22	0/1:10,11:21:22.31:135,0,22	1/1:8,9:17:3.83:160,4,0	0/0:20,0:21:44.87:0,45,398	0/0:38,0:38:88:0,88,749	1/1:7,1:16:16.27:65,16,0	0/1:13,18:32:18.85:273,0,19	0/1:9,10:20:13.78:173,0,14	0/1:5,7:12:4.49:118,0,4
chr10	35094494	.	CAGG	C	2989.92	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=10.918;DP=800;FS=2.173;HRun=0;HaplotypeScore=112.3513;InbreedingCoeff=0.9995;MQ=83.41;MQ0=1;MQRankSum=-1.713;QD=37.37;ReadPosRankSum=4.382;VQSLOD=4.7857;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,138,2989	0/0:16,0:16:45.12:0,45,945	0/0:28,0:28:84.27:0,84,1645	0/0:18,0:18:33.64:0,34,708	0/0:28,0:28:74.78:0,75,1649	0/0:21,0:21:60.21:0,60,1302	0/0:23,0:23:69.24:0,69,1520	0/0:40,0:40:99:0,111,2373	0/0:33,0:33:93.31:0,93,1988	0/0:25,0:25:75.26:0,75,1655	0/0:22,0:22:66.23:0,66,1446	1/1:2,25:27:75.26:1205,75,0	0/0:26,0:26:75.26:0,75,1640	0/0:32,0:32:96.33:0,96,2103	0/0:38,0:38:99:0,108,2380	0/0:22,0:22:63.22:0,63,1390	0/0:35,0:35:96.33:0,96,2111	0/0:25,0:25:60.21:0,60,1296	0/0:38,0:38:99:0,105,2234	0/0:31,0:31:93.32:0,93,2042	0/0:40,0:39:99:0,114,2449	0/0:33,0:33:96.33:0,96,2093	1/1:0,20:20:48.16:771,48,0	1/1:2,31:33:72.25:1157,72,0	0/0:24,0:24:66.23:0,66,1455	0/0:29,0:29:72.25:0,72,1589	0/0:37,0:37:99:0,99,2183	0/0:9,0:9:27.09:0,27,596
chr10	35094645	.	AC	A	8452.41	PASS	AB=0.897;AC=44;AF=0.786;AN=56;BaseQRankSum=-3.017;DP=638;FS=0.871;HRun=10;HaplotypeScore=79.5388;InbreedingCoeff=0.7273;MQ=88.51;MQ0=0;MQRankSum=-3.960;QD=16.61;ReadPosRankSum=4.485;VQSLOD=5.4036;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,2:41:38.09:0,38,851	0/1:5,1:6:11.05:11,0,104	0/0:22,1:22:14.38:0,14,270	0/1:28,2:29:13.83:14,0,348	0/0:14,0:18:32.31:0,32,257	1/1:8,13:22:44.02:370,44,0	1/1:6,21:27:59.98:521,60,0	1/1:15,9:24:0.85:213,1,0	0/0:4,0:19:9.57:0,10,63	1/1:5,14:20:41.01:344,41,0	1/1:3,8:11:23.97:204,24,0	1/1:5,18:24:33.76:449,34,0	1/1:3,20:23:59.99:520,60,0	1/1:5,17:22:50.97:443,51,0	1/1:7,21:28:56.97:495,57,0	1/1:3,25:28:65.95:573,66,0	0/0:12,0:28:58.23:0,58,413	1/1:3,17:21:43.06:350,43,0	1/1:4,17:21:47.98:416,48,0	1/1:5,7:14:25.06:194,25,0	1/1:8,24:32:68.98:597,69,0	1/1:6,9:17:40.04:319,40,0	1/1:4,18:22:44.99:390,45,0	1/1:7,22:31:6.69:492,7,0	1/1:3,18:21:56.99:494,57,0	1/1:8,5:15:22.05:168,22,0	1/1:8,28:38:76.04:637,76,0	1/1:2,9:11:28.55:239,29,0
chr10	35099223	.	C	CT	26881.28	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-10.047;DP=714;FS=2.427;HRun=0;HaplotypeScore=63.5798;InbreedingCoeff=0.9988;MQ=78.92;MQ0=0;MQRankSum=-11.056;QD=40.79;ReadPosRankSum=6.034;VQSLOD=5.1004;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,39:40:84.29:1342,84,0	1/1:0,8:8:24.08:383,24,0	0/0:27,0:27:78.21:0,78,1053	0/0:28,0:28:81.02:0,81,1010	1/1:0,23:23:60.20:958,60,0	1/1:1,25:26:69.24:1102,69,0	1/1:0,31:31:81.28:1294,81,0	1/1:0,25:25:72.17:1013,72,0	1/1:0,37:37:90.31:1436,90,0	1/1:1,28:29:84.23:1266,84,0	1/1:0,16:16:42.14:671,42,0	1/1:1,29:30:81.28:1294,81,0	1/1:0,20:20:54.18:863,54,0	1/1:0,23:23:48.16:766,48,0	1/1:1,38:39:95.63:1621,96,0	1/1:2,31:33:81.28:1294,81,0	1/1:1,29:30:72.25:1150,72,0	1/1:0,23:24:66.22:1038,66,0	1/1:0,22:22:66.22:1026,66,0	1/1:1,22:23:51.12:786,51,0	1/1:0,38:38:99:1678,105,0	1/1:0,24:25:62.96:975,63,0	1/1:0,14:14:38.84:623,39,0	1/1:0,18:18:45.15:719,45,0	1/1:0,23:23:60.20:959,60,0	1/1:0,28:28:84.06:1284,84,0	1/1:0,22:22:48.16:767,48,0	1/1:0,12:12:36.12:575,36,0
chr10	35100666	.	GA	G	115.83	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.802;DP=593;FS=1.221;HRun=1;HaplotypeScore=95.3513;InbreedingCoeff=0.9937;MQ=70.25;MQ0=0;MQRankSum=-1.976;QD=16.55;ReadPosRankSum=-0.172;VQSLOD=3.6987;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:39:95.41:0,95,1619	1/1:1,5:7:21:208,21,0	0/0:27,0:21:53.98:0,54,700	0/0:31,0:25:43.17:0,43,534	0/0:16,0:16:48.16:0,48,726	0/0:19,0:19:57.19:0,57,872	0/0:19,0:19:57.19:0,57,866	0/0:27,0:26:72.20:0,72,1004	0/0:22,0:23:59.32:0,59,931	0/0:12,0:12:36.11:0,36,518	0/0:14,0:14:42.14:0,42,641	0/0:23,0:23:66.21:0,66,988	0/0:23,0:23:66.21:0,66,977	0/0:22,0:22:62.55:0,63,916	0/0:24,0:24:72.24:0,72,1097	0/0:22,0:22:66.22:0,66,1007	0/0:21,0:21:56.70:0,57,848	0/0:21,0:21:57.14:0,57,822	0/0:16,0:16:47.97:0,48,604	0/0:21,0:21:63.13:0,63,910	0/0:24,0:24:66.13:0,66,967	0/0:27,0:27:81.19:0,81,1174	0/0:22,0:22:66.22:0,66,1005	0/0:24,0:24:72.19:0,72,1030	0/0:20,0:20:57.16:0,57,813	0/0:21,0:21:60.19:0,60,897	0/0:19,0:19:57.17:0,57,822	0/0:8,0:8:24.08:0,24,361
chr10	35100668	.	GA	G	63.66	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.218;DP=598;FS=1.381;HRun=4;HaplotypeScore=96.6605;InbreedingCoeff=0.9919;MQ=69.90;MQ0=0;MQRankSum=-2.326;QD=7.96;ReadPosRankSum=-1.524;VQSLOD=-0.1173;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,104,1394	1/1:3,5:8:21.26:156,21,0	0/0:28,0:21:51.09:0,51,655	0/0:34,0:25:41.94:0,42,512	0/0:16,0:16:48.15:0,48,654	0/0:19,0:19:57.18:0,57,781	0/0:19,0:19:51.16:0,51,694	0/0:27,0:26:75.19:0,75,984	0/0:24,0:24:61.57:0,62,895	0/0:12,0:12:36.11:0,36,490	0/0:14,0:14:42.14:0,42,587	0/0:23,0:23:66.21:0,66,907	0/0:24,0:24:72.22:0,72,982	0/0:21,0:21:59.32:0,59,833	0/0:25,0:25:75.24:0,75,1035	0/0:24,0:24:69.19:0,69,904	0/0:21,0:21:56.93:0,57,777	0/0:20,0:20:54.18:0,54,756	0/0:14,0:14:42.12:0,42,558	0/0:22,0:22:63.19:0,63,849	0/0:23,0:24:66.16:0,66,922	0/0:28,0:28:84.22:0,84,1120	0/0:22,0:22:66.22:0,66,923	0/0:25,0:25:68.37:0,68,948	0/0:19,0:19:54.17:0,54,736	0/0:20,0:20:60.20:0,60,837	0/0:19,0:19:54.18:0,54,754	0/0:8,0:8:21.07:0,21,294
chr10	35104487	.	GAGCATTAA	G	41945.93	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-4.207;DP=708;FS=0.725;HRun=0;HaplotypeScore=229.1054;InbreedingCoeff=0.9701;MQ=62.99;MQ0=0;MQRankSum=-8.869;QD=61.96;ReadPosRankSum=6.299;VQSLOD=4.1937;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,30:35:66.23:1889,66,0	1/1:1,14:15:36.12:1033,36,0	0/0:15,0:15:42.10:0,42,1422	0/0:15,0:16:25.42:0,25,1381	1/1:2,12:14:15.05:430,15,0	1/1:3,28:31:69.24:1977,69,0	1/1:3,32:35:75.26:2149,75,0	1/1:8,18:26:54.15:1389,54,0	1/1:2,28:30:69.24:1979,69,0	1/1:2,22:24:66.20:1811,66,0	1/1:2,11:13:18.06:515,18,0	1/1:4,37:41:99:2926,102,0	1/1:2,36:38:99:2836,99,0	1/1:3,40:43:99:2925,102,0	1/1:2,30:32:84.29:2407,84,0	1/1:0,37:37:99:3012,105,0	1/1:0,21:21:41.98:1204,42,0	1/1:3,26:29:63.22:1808,63,0	1/1:6,26:32:81.23:2025,81,0	1/1:1,13:14:33.11:947,33,0	1/1:6,26:32:30.25:860,30,0	1/1:2,22:24:47.99:1376,48,0	1/1:3,17:20:23.51:688,24,0	1/1:2,18:20:36.12:1027,36,0	1/1:0,19:20:54.19:1549,54,0	1/1:2,17:19:51.18:1463,51,0	1/1:3,21:24:48.16:1377,48,0	1/1:0,8:8:12.04:344,12,0
chr10	35105223	.	AAG	A	2393.82	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.512;DP=594;FS=6.670;HRun=0;HaplotypeScore=69.5930;InbreedingCoeff=0.9988;MQ=88.16;MQ0=0;MQRankSum=-3.692;QD=35.73;ReadPosRankSum=2.617;VQSLOD=5.9233;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:63.22:0,63,1154	0/0:10,0:10:27.08:0,27,463	0/0:23,0:23:63.22:0,63,1122	0/0:21,0:21:59.57:0,60,1010	0/0:13,0:13:39.12:0,39,679	0/0:18,0:18:51.17:0,51,935	0/0:37,0:37:99:0,111,2035	0/0:35,0:35:99:0,99,1769	0/0:16,0:16:48.16:0,48,880	0/0:23,0:23:69.24:0,69,1257	0/0:14,0:14:42.14:0,42,770	1/1:1,24:25:60.20:860,60,0	0/0:18,0:18:48.16:0,48,880	0/0:13,0:13:36.10:0,36,627	0/0:25,0:25:75.26:0,75,1365	0/0:16,0:16:48.16:0,48,861	0/0:33,0:33:93.28:0,93,1654	0/0:22,0:22:63.22:0,63,1154	0/0:23,0:23:66.23:0,66,1208	0/0:26,0:26:78.27:0,78,1422	0/0:24,0:24:69.24:0,69,1259	0/0:27,0:27:78.27:0,78,1429	1/1:0,23:23:69.23:989,69,0	1/1:0,19:19:48.16:688,48,0	0/0:17,0:17:51.17:0,51,933	0/0:21,0:21:60.21:0,60,1100	0/0:21,0:21:60.21:0,60,1082	0/0:9,0:9:24.08:0,24,440
chr10	35106544	.	A	AT	2624.05	PASS	AB=0.705;AC=33;AF=0.589;AN=56;BaseQRankSum=-8.743;DP=559;FS=2.236;HRun=14;HaplotypeScore=75.9692;InbreedingCoeff=0.3111;MQ=69.46;MQ0=0;MQRankSum=-0.857;QD=6.12;ReadPosRankSum=-2.725;VQSLOD=2.1451;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:11,6:36:23.76:154,24,0	1/1:4,0:6:5.64:27,6,0	0/0:8,0:8:8.64:0,9,51	0/0:10,0:10:9.33:0,9,46	0/0:6,0:24:34.04:0,34,98	0/1:11,9:20:20.52:88,0,21	1/1:6,13:19:21:185,21,0	0/1:20,14:35:49.98:188,0,50	0/0:8,0:24:28.10:0,28,81	0/1:7,6:13:17.48:108,0,17	0/1:20,3:25:29.11:57,0,29	0/1:10,2:12:8.78:9,0,78	1/1:9,14:23:7.71:170,8,0	0/1:4,12:16:9.34:45,0,9	1/1:6,8:14:8.99:76,9,0	1/1:2,13:17:31.99:295,32,0	0/0:6,0:25:41.38:0,41,129	0/1:12,17:31:1.78:100,0,2	1/1:9,12:21:10.73:218,11,0	0/1:8,11:19:8.91:146,0,9	1/1:6,9:15:12.47:107,12,0	0/1:14,12:26:31.98:110,0,32	0/0:11,0:15:16.87:0,17,81	0/0:24,0:24:22.90:0,23,153	1/1:6,11:19:8.85:177,9,0	1/1:9,8:17:18.43:151,18,0	1/1:8,25:34:9.87:227,10,0	1/1:2,8:11:17.16:179,17,0
chr10	35107367	.	AGGGAGG	A	496.05	PASS	AB=0.993;AC=29;AF=0.558;AN=52;BaseQRankSum=1.230;DP=251;FS=4.864;HRun=0;HaplotypeScore=61.1766;InbreedingCoeff=-0.1080;MQ=24.49;MQ0=14;MQRankSum=0.701;QD=2.80;ReadPosRankSum=-0.075;VQSLOD=0.4696;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:7,0:7:47.82:75,0,48	0/0:5,0:5:0.76:0,1,19	0/0:22,0:2:6.02:0,6,115	0/1:36,0:6:10.73:11,0,113	0/1:17,0:19:0:1,0,0	0/1:11,0:10:33.61:34,0,142	0/1:8,0:5:22.40:23,0,22	0/1:6,0:5:10.92:11,0,33	./.	0/1:8,0:7:11.30:11,0,33	1/1:7,0:6:3.73:22,4,0	1/1:6,1:7:3.39:59,3,0	1/1:2,0:2:2.96:19,3,0	1/1:3,0:2:1.82:5,2,0	0/0:5,0:3:3:0,3,36	0/1:2,0:2:17.80:44,0,18	./.	0/1:4,0:4:17.58:18,0,79	1/1:9,0:4:3.01:48,3,0	0/1:8,0:8:1.04:41,0,1	0/0:16,0:14:5.81:0,6,24	0/1:13,0:13:22.73:30,0,23	1/1:5,2:7:10.57:59,11,0	1/1:8,1:7:8.39:81,8,0	0/0:21,0:18:20.10:0,20,149	0/1:6,0:6:34.91:35,0,51	0/1:3,0:2:0:0,0,0	1/1:2,0:2:2.74:12,3,0
chr10	35107368	.	G	GAA	1150.93	PASS	AB=0.816;AC=21;AF=0.375;AN=56;BaseQRankSum=-2.412;DP=243;FS=3.010;HRun=1;HaplotypeScore=61.4376;InbreedingCoeff=-0.3143;MQ=24.06;MQ0=15;MQRankSum=-0.491;QD=7.67;ReadPosRankSum=1.505;VQSLOD=0.5214;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:4,3:7:79.88:139,0,80	0/1:3,1:4:6.22:6,0,39	0/0:24,0:2:5.85:0,6,62	0/0:37,0:6:2.81:0,3,57	1/1:9,6:15:0.47:1,0,0	0/1:5,6:10:99:272,0,127	0/0:7,1:5:1.31:0,1,45	0/1:5,1:5:26.90:27,0,98	0/0:3,0:3:2.04:0,2,6	0/1:6,2:7:99:106,0,101	0/1:2,2:3:7.08:13,0,7	0/0:9,0:8:9.42:0,9,81	0/0:1,0:1:0:0,0,0	0/0:3,0:2:2.68:0,3,12	0/0:5,0:3:5.05:0,5,43	0/1:1,1:2:38.39:48,0,38	0/0:2,0:1:1.25:0,1,3	0/1:4,0:4:0.90:1,0,91	0/1:8,1:4:30.80:31,0,31	0/1:6,0:6:17.42:25,0,17	0/1:13,3:14:3.75:4,0,78	0/1:7,6:13:66.20:105,0,66	0/1:7,0:7:5.44:39,0,5	0/1:9,0:7:3.57:34,0,4	0/1:13,6:16:93.02:180,0,93	0/1:1,4:5:14.11:221,0,14	0/1:3,0:2:0.38:0,0,0	1/1:1,1:2:3.01:30,3,0
chr10	35107373	.	GGGGA	G	542.03	PASS	AB=0.935;AC=29;AF=0.518;AN=56;BaseQRankSum=2.218;DP=265;FS=2.735;HRun=0;HaplotypeScore=61.5353;InbreedingCoeff=-0.0943;MQ=23.81;MQ0=18;MQRankSum=0.454;QD=3.71;ReadPosRankSum=0.167;VQSLOD=1.6249;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:9,0:8:22.68:25,0,23	0/1:3,2:5:24.36:24,0,28	0/0:28,0:4:9.02:0,9,112	0/0:42,0:6:2:0,2,113	0/0:18,0:17:0:0,0,0	0/1:12,0:10:43.64:73,0,44	0/1:10,0:7:11.72:18,0,12	0/1:6,1:5:15.52:46,0,16	0/0:3,0:3:0.47:0,0,1	0/1:7,1:7:13.26:60,0,13	1/1:4,0:3:3.47:38,3,0	0/1:9,0:8:18.92:19,0,54	1/1:1,0:1:0.89:2,1,0	1/1:3,0:2:2.60:10,3,0	0/0:5,0:3:5.45:0,5,28	1/1:2,1:3:2.98:61,3,0	0/0:3,0:1:2.37:0,2,8	0/0:4,0:4:11.82:0,12,98	1/1:7,0:3:3.01:34,3,0	0/1:6,1:7:17.24:27,0,17	0/0:16,0:14:2.59:0,3,22	0/1:13,1:14:0.85:74,0,1	1/1:7,0:7:0.03:4,0,0	1/1:10,0:8:9.67:45,10,0	0/1:20,0:17:59.67:63,0,60	0/1:5,0:5:30.11:30,0,42	1/1:3,0:2:1.03:3,1,0	1/1:2,0:2:3:27,3,0
chr10	35107379	.	AGAGG	A	513.53	PASS	AB=0.921;AC=26;AF=0.481;AN=54;BaseQRankSum=2.338;DP=288;FS=1.396;HRun=0;HaplotypeScore=70.2003;InbreedingCoeff=-0.0148;MQ=23.99;MQ0=21;MQRankSum=0.604;QD=2.84;ReadPosRankSum=1.977;VQSLOD=1.5793;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:6:0.88:0,1,11	0/1:5,1:6:6.86:7,0,44	0/0:31,0:6:9.50:0,9,182	0/0:49,0:8:23.46:0,23,198	0/1:17,1:18:0:0,0,0	0/1:12,2:11:37.83:38,0,50	0/1:12,0:9:0.96:1,0,21	0/1:7,0:6:13.85:25,0,14	0/0:3,0:3:2.84:0,3,15	1/1:6,0:6:11.84:87,12,0	0/0:4,1:4:1.37:0,1,5	0/1:10,0:9:44.42:58,0,44	0/1:3,0:3:1.98:2,0,18	0/1:2,0:3:15.43:22,0,15	./.	0/1:2,1:3:7:36,0,7	0/0:5,0:3:8.49:0,8,59	0/1:4,0:4:0:0,0,0	1/1:3,1:2:3.01:33,3,0	0/1:5,0:6:17.78:26,0,18	0/1:18,0:14:1.37:1,0,18	1/1:13,1:15:10.94:50,11,0	0/1:8,0:8:8.56:9,0,11	0/1:10,0:9:15.73:40,0,16	1/1:17,0:15:14.82:77,15,0	0/1:5,1:6:0.70:97,0,1	0/1:3,0:2:0.21:0,0,0	1/1:2,1:3:5.97:47,6,0
chr10	35107381	.	AGGGAGGGAGAGG	A	1276.63	PASS	AB=0.920;AC=23;AF=0.411;AN=56;BaseQRankSum=-0.587;DP=296;FS=9.345;HRun=0;HaplotypeScore=87.9548;InbreedingCoeff=-0.2388;MQ=24.37;MQ0=24;MQRankSum=-0.171;QD=7.51;ReadPosRankSum=2.605;VQSLOD=0.1451;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:7,1:7:22.23:79,0,22	0/1:6,0:6:16.62:17,0,29	0/0:29,0:6:15.41:0,15,274	0/0:48,0:8:21.72:0,22,233	0/0:20,0:19:5.29:0,5,104	0/1:14,0:11:11.46:11,0,112	0/1:9,2:9:28.80:179,0,29	0/1:9,0:6:7.03:7,0,30	0/0:3,0:3:3.45:0,3,22	0/1:4,1:5:12.87:111,0,13	0/0:5,0:4:1.40:0,1,8	0/1:10,0:10:44.98:45,0,125	1/1:4,1:4:10.85:239,11,0	0/0:3,0:3:0.93:0,1,20	0/0:6,1:4:3:0,3,31	0/0:3,0:3:0.48:0,0,16	0/0:5,0:3:8.64:0,9,82	1/1:4,0:4:5.89:89,6,0	1/1:6,0:2:3:28,3,0	0/1:6,1:7:3.62:116,0,4	0/1:16,2:14:26.80:128,0,27	0/1:15,1:16:7.47:24,0,7	0/1:8,0:8:2.80:3,0,73	0/1:11,0:10:11.02:65,0,11	0/1:14,2:14:33.36:78,0,33	0/1:6,1:7:57.34:194,0,57	1/1:3,0:2:0.47:1,0,0	0/1:3,0:3:8.63:9,0,26
chr10	35107385	.	AGG	A	204.01	PASS	AB=0.947;AC=18;AF=0.321;AN=56;BaseQRankSum=2.598;DP=329;FS=2.159;HRun=3;HaplotypeScore=74.8613;InbreedingCoeff=-0.2752;MQ=25.18;MQ0=29;MQRankSum=-0.125;QD=1.31;ReadPosRankSum=2.938;VQSLOD=-0.6158;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:9,1:9:7.76:0,8,43	0/1:8,1:9:1.85:2,0,64	0/0:35,0:6:9.03:0,9,158	0/0:56,0:9:23.22:0,23,271	0/0:15,1:15:5.66:0,6,75	0/1:16,0:12:4.06:4,0,49	0/1:12,0:11:4.28:4,0,49	0/1:9,1:8:7.11:41,0,7	0/0:2,1:3:0:0,0,1	0/1:7,0:6:19.19:26,0,19	0/0:4,0:3:3.47:0,3,9	0/1:12,0:11:52.63:53,0,56	0/1:3,0:4:0.35:8,0,0	0/1:7,0:7:10.03:10,0,30	0/0:7,0:4:2.88:0,3,17	0/1:3,1:4:10.60:40,0,11	0/1:6,1:5:18.56:19,0,43	0/1:1,0:3:11.22:11,0,14	0/0:9,0:4:7.71:0,8,43	1/1:6,1:7:5.65:24,6,0	0/0:19,0:15:1.53:0,2,32	0/1:14,1:16:24.37:24,0,28	0/0:8,0:8:4.95:0,5,74	0/1:10,0:9:15.69:35,0,16	0/1:15,0:15:14.73:15,0,32	0/1:8,0:9:18.48:18,0,30	0/0:4,0:3:2.90:0,3,18	0/1:4,0:4:9.32:9,0,11
chr10	35107393	.	GGA	G	522.73	PASS	AB=0.881;AC=15;AF=0.268;AN=56;BaseQRankSum=5.102;DP=372;FS=0.000;HRun=0;HaplotypeScore=81.6809;InbreedingCoeff=0.0196;MQ=30.66;MQ0=34;MQRankSum=-1.266;QD=4.18;ReadPosRankSum=2.779;VQSLOD=2.1748;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:11:11.30:0,11,131	0/1:8,0:9:0.05:0,0,171	0/0:36,0:6:11.63:0,12,164	0/0:57,0:10:10.96:0,11,145	0/0:15,0:15:6.02:0,6,106	0/1:16,0:14:19.32:19,0,188	0/0:12,0:12:21.41:0,21,225	0/0:13,0:11:5.56:0,6,234	0/0:6,0:6:5.85:0,6,73	0/0:12,0:9:9.09:0,9,168	1/1:5,0:5:2.66:13,3,0	1/1:6,9:13:4.93:283,5,0	0/1:8,0:7:22.34:23,0,22	0/0:10,0:10:5.02:0,5,158	0/0:7,0:5:2.97:0,3,52	0/1:5,0:6:0.99:1,0,87	0/0:9,0:7:14.25:0,14,205	0/0:3,0:3:5.38:0,5,48	0/1:10,0:5:18.05:18,0,87	0/1:8,0:6:7.08:7,0,59	0/0:21,0:16:10.94:0,11,78	0/1:15,0:16:36.10:36,0,83	0/1:6,3:9:54.86:55,0,55	1/1:11,4:13:17.96:178,18,0	0/0:16,0:16:7.31:0,7,80	0/0:11,0:12:2.37:0,2,121	0/0:3,0:3:3.01:0,3,36	0/1:2,0:4:34.14:34,0,34
chr10	35107395	.	A	AGG	632.52	PASS	AB=0.983;AC=16;AF=0.286;AN=56;BaseQRankSum=4.106;DP=378;FS=0.000;HRun=3;HaplotypeScore=93.8430;InbreedingCoeff=-0.0065;MQ=31.72;MQ0=35;MQRankSum=-2.550;QD=4.52;ReadPosRankSum=1.382;VQSLOD=-0.4075;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:12:9.53:0,10,113	0/0:10,0:10:4.43:0,4,179	0/0:33,0:6:11.91:0,12,153	0/0:55,0:10:2.53:0,3,118	0/0:15,0:14:6.01:0,6,92	0/0:18,0:14:3.49:0,3,218	0/0:13,0:13:21.43:0,21,218	0/0:14,0:11:20.01:0,20,307	0/0:7,0:7:5.89:0,6,62	0/0:13,0:10:23.57:0,24,225	1/1:7,0:6:5.78:34,6,0	0/1:14,1:13:11.76:268,0,12	1/1:8,0:7:0.89:41,1,0	0/0:10,0:10:8.11:0,8,153	0/1:8,0:6:9.05:9,0,82	0/0:7,0:7:13.02:0,13,130	0/0:10,0:8:9.86:0,10,203	0/1:4,0:3:10.19:10,0,36	0/1:12,0:6:27.34:27,0,108	0/1:8,0:6:3.92:4,0,82	0/1:23,0:18:3.13:3,0,31	0/1:17,0:17:7.94:8,0,87	0/1:7,1:8:54.26:91,0,54	1/1:10,5:13:11.14:234,11,0	0/0:16,0:16:4.10:0,4,143	0/1:11,0:11:0.22:0,0,149	0/0:2,0:2:3.01:0,3,38	0/1:4,0:4:28.97:48,0,29
chr10	35108562	.	GAGACAGAGAC	G	1006.26	PASS	AB=1.000;AC=6;AF=0.107;AN=56;BaseQRankSum=5.621;DP=911;FS=0.000;HRun=0;HaplotypeScore=273.9027;InbreedingCoeff=0.7129;MQ=58.54;MQ0=16;MQRankSum=-4.230;QD=6.89;ReadPosRankSum=-3.711;VQSLOD=1.3069;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:25,8:33:39.41:610,39,0	1/1:7,8:15:20.99:472,21,0	0/0:34,0:16:7.26:0,7,110	0/1:59,0:12:0:0,0,0	0/0:18,0:18:11.29:0,11,138	0/0:23,0:23:48.15:0,48,1791	0/0:29,0:28:48.10:0,48,1488	0/0:54,0:51:73.47:0,73,1334	0/1:39,0:39:51.99:52,0,496	0/0:44,0:44:78.27:0,78,2894	0/0:20,0:18:30.10:0,30,1109	0/0:28,0:28:66.16:0,66,2268	0/0:38,0:38:84.29:0,84,3466	0/0:23,0:23:33.10:0,33,1094	0/0:26,0:26:51.17:0,51,1830	0/0:32,0:32:72.25:0,72,2877	0/0:35,0:35:44.56:0,45,683	0/0:33,0:33:66.23:0,66,2021	0/0:27,0:21:27.09:0,27,849	0/0:30,0:30:60.20:0,60,2123	0/0:62,0:61:99:0,154,5315	0/0:29,0:29:60.19:0,60,2156	0/0:28,0:28:51.17:0,51,1896	0/0:61,0:61:99:0,114,4488	0/0:23,0:21:48.16:0,48,1998	0/0:35,0:34:72.24:0,72,2099	0/0:23,0:23:60.21:0,60,2389	0/0:9,0:9:27.09:0,27,1111
chr10	35108578	.	GAGACAGACAGAGAC	G	566.55	PASS	AB=0.983;AC=7;AF=0.125;AN=56;BaseQRankSum=7.120;DP=872;FS=0.000;HRun=0;HaplotypeScore=345.0465;InbreedingCoeff=0.5664;MQ=57.92;MQ0=14;MQRankSum=-4.391;QD=4.05;ReadPosRankSum=-1.050;VQSLOD=1.3618;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:34:30:0,30,537	0/1:10,0:10:31.74:32,0,90	0/0:18,0:10:5.99:0,6,77	0/1:40,0:10:0.01:0,0,1	1/1:7,12:19:9.15:67,9,0	0/0:20,0:20:39.13:0,39,1778	0/0:30,0:29:54.03:0,54,1772	0/0:55,0:50:58.43:0,58,1249	1/1:12,23:35:29.53:368,30,0	0/0:38,0:38:75.26:0,75,3100	0/0:17,0:15:27.09:0,27,1257	0/0:31,0:31:63.22:0,63,2589	0/0:39,0:39:90.31:0,90,4538	0/0:21,0:21:36.11:0,36,1564	0/0:24,0:24:42.14:0,42,2027	0/0:38,0:38:90.31:0,90,3994	0/1:33,0:34:60.36:230,0,60	0/0:38,0:38:72.25:0,72,2808	0/0:21,0:14:21.07:0,21,736	0/0:31,0:30:60.19:0,60,2595	0/0:62,0:61:99:0,126,4801	0/0:27,0:27:51.18:0,51,2092	0/0:30,0:28:45.13:0,45,1966	0/0:57,0:57:99:0,111,5124	0/0:22,0:21:54.18:0,54,2116	0/0:41,0:40:66.23:0,66,2693	0/0:26,0:26:60.21:0,60,2674	0/0:12,0:12:36.11:0,36,1477
chr10	35108752	.	GAGAC	G	316.21	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.162;DP=1132;FS=5.246;HRun=0;HaplotypeScore=197.7637;InbreedingCoeff=0.9603;MQ=58.84;MQ0=21;MQRankSum=-4.468;QD=22.59;ReadPosRankSum=-1.857;VQSLOD=2.8890;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:74,0:74:99:0,184,4169	1/1:7,7:14:27.08:410,27,0	0/0:33,0:10:17.80:0,18,319	0/0:72,1:18:12.01:0,12,189	0/0:49,0:49:99:0,120,2628	0/0:27,0:27:66.23:0,66,1453	0/0:34,0:34:80.28:0,80,1801	0/0:45,0:43:99:0,99,2070	0/0:51,0:51:99:0,102,2326	0/0:52,0:52:99:0,128,2830	0/0:34,0:34:78.27:0,78,1707	0/0:34,0:34:69.24:0,69,1582	0/0:42,0:42:99:0,105,2521	0/0:29,0:29:80.64:0,81,1798	0/0:34,0:34:87.28:0,87,2016	0/0:39,0:39:84.29:0,84,1912	0/0:55,0:55:64.83:0,65,2360	0/0:40,0:40:99:0,113,2199	0/0:27,0:14:33.11:0,33,814	0/0:35,0:35:87.28:0,87,1910	0/0:67,0:67:99:0,168,3850	0/0:49,0:49:99:0,129,2955	0/0:34,0:32:66.21:0,66,1565	0/0:47,0:47:87.28:0,87,2070	0/0:22,0:22:35.57:0,36,1308	0/0:51,0:50:99:0,129,2931	0/0:30,0:29:78.27:0,78,1803	0/0:10,0:10:30.10:0,30,748
chr10	35108814	.	AACAG	A	498.05	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.158;DP=1106;FS=6.877;HRun=0;HaplotypeScore=208.2651;InbreedingCoeff=0.9968;MQ=62.46;MQ0=15;MQRankSum=-0.803;QD=27.67;ReadPosRankSum=0.210;VQSLOD=2.7635;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:60,0:60:99:0,123,3057	1/1:4,14:18:36.05:593,36,0	0/0:47,0:19:51.09:0,51,919	0/0:75,0:33:22.32:0,22,444	0/0:36,0:36:93.28:0,93,2112	0/0:27,0:27:72.25:0,72,1822	0/0:38,0:38:99:0,102,2439	0/0:43,0:42:99:0,117,2617	0/0:33,0:33:72.22:0,72,1725	0/0:44,0:44:99:0,120,2904	0/0:30,0:30:84.28:0,84,2088	0/0:33,0:33:63.20:0,63,1074	0/0:47,0:47:99:0,129,3082	0/0:28,0:28:78.24:0,78,1864	0/0:39,0:39:99:0,108,2672	0/0:42,0:42:99:0,123,2957	0/0:51,0:51:99:0,121,2805	0/0:41,0:42:99:0,100,2357	0/0:23,0:20:60.19:0,60,1389	0/0:38,0:38:99:0,111,2800	0/0:62,0:62:99:0,153,3569	0/0:38,0:38:99:0,102,2382	0/0:33,0:33:66.21:0,66,1179	0/0:52,0:53:75.20:0,75,1307	0/0:23,0:23:60.19:0,60,1521	0/0:60,0:61:99:0,172,4076	0/0:27,0:26:78.20:0,78,1906	0/0:15,0:15:42.14:0,42,1034
chr10	35108830	.	CAG	C	2888.34	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=10.909;DP=1103;FS=19.255;HRun=0;HaplotypeScore=147.9953;InbreedingCoeff=0.8520;MQ=61.06;MQ0=18;MQRankSum=2.522;QD=14.37;ReadPosRankSum=3.468;VQSLOD=2.2180;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:65,0:64:99:0,147,2593	0/0:18,0:18:45.10:0,45,533	0/0:42,0:16:39.18:0,39,609	0/1:79,0:29:9.29:9,0,217	0/0:30,0:30:84.29:0,84,1546	0/0:28,0:28:81.23:0,81,1380	0/0:40,0:40:99:0,111,1822	0/0:52,0:50:99:0,147,2382	0/0:33,0:33:78.18:0,78,1267	0/0:45,0:45:99:0,135,2416	0/0:27,0:27:78.23:0,78,1397	1/1:0,29:29:54.18:825,54,0	0/0:42,0:42:99:0,120,2230	0/0:29,0:29:84.16:0,84,1477	0/0:37,0:37:99:0,108,1976	0/0:39,0:39:99:0,117,2099	0/0:45,0:45:99:0,128,2261	0/0:38,1:39:65.52:0,66,1864	0/0:24,0:19:57.18:0,57,1037	0/0:39,0:39:99:0,117,2005	0/0:63,0:63:99:0,171,3038	0/0:36,0:36:99:0,105,1772	1/1:0,37:37:69.23:1055,69,0	1/1:4,50:54:75.25:1146,75,0	0/0:25,0:25:75.23:0,75,1370	0/0:56,0:56:99:0,165,2932	0/0:26,0:26:78.24:0,78,1370	0/0:19,0:19:54.17:0,54,972
chr10	35108910	.	GAGAC	G	1346.25	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=2.830;DP=1047;FS=9.476;HRun=0;HaplotypeScore=182.9846;InbreedingCoeff=0.9898;MQ=58.33;MQ0=15;MQRankSum=1.595;QD=12.94;ReadPosRankSum=2.091;VQSLOD=2.2697;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:67,0:67:99:0,130,2916	0/0:8,0:8:24.03:0,24,488	0/0:42,0:10:17.94:0,18,360	0/0:59,0:27:27.23:0,27,534	0/0:29,0:29:63.15:0,63,1387	0/0:25,0:24:54.11:0,54,1147	0/0:37,0:37:84.23:0,84,1768	0/0:53,0:52:99:0,126,2558	0/0:42,0:42:99:0,114,2761	0/0:50,0:50:99:0,126,2960	0/0:22,0:22:63.20:0,63,1444	1/1:12,26:38:51.16:871,51,0	0/0:34,0:34:75.21:0,75,1750	0/0:33,0:33:81.26:0,81,1954	0/0:44,0:44:99:0,123,2740	0/0:26,0:26:69.16:0,69,1455	0/0:44,0:44:98.92:0,99,2036	0/0:33,0:33:90.20:0,90,1930	0/0:32,0:20:45.15:0,45,1016	0/0:38,0:38:99:0,105,2575	0/0:74,0:74:99:0,165,3909	0/0:25,0:25:57.15:0,57,1231	1/1:14,12:26:14.97:167,15,0	1/1:23,17:40:27.08:449,27,0	0/0:31,0:31:78.25:0,78,1798	0/0:54,0:54:99:0,141,3204	0/0:22,0:22:66.20:0,66,1538	0/0:18,0:18:51.16:0,51,1117
chr10	35108946	.	CAGACAGACAG	C	31.83	PASS	AB=0.892;AC=3;AF=0.056;AN=54;BaseQRankSum=4.279;DP=1015;FS=0.000;HRun=0;HaplotypeScore=318.6740;InbreedingCoeff=0.5820;MQ=54.34;MQ0=23;MQRankSum=-3.511;QD=0.50;ReadPosRankSum=-2.777;VQSLOD=1.5958;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:49:88.41:0,88,3792	0/0:6,0:6:11.32:0,11,412	0/0:56,0:18:38.27:0,38,1051	0/0:77,0:21:27.78:0,28,866	0/0:25,0:25:51.11:0,51,1926	0/0:20,0:20:51.18:0,51,2330	0/0:37,0:37:87.16:0,87,3852	0/0:66,0:63:99:0,154,5108	0/0:40,0:40:69.20:0,69,2674	0/0:38,0:38:96.31:0,96,3836	0/0:24,0:24:69.22:0,69,2599	0/1:29,4:33:5:98,0,5	0/0:33,0:33:87.30:0,87,3863	0/0:36,0:36:96.32:0,96,4190	0/0:41,0:41:99:0,108,4687	0/0:35,0:35:99:0,99,4191	0/0:35,0:35:66.17:0,66,2884	0/0:33,0:33:29.52:0,30,3237	0/0:29,0:22:57.19:0,57,2404	0/0:36,0:36:87.28:0,87,3348	0/0:74,0:74:99:0,175,6957	0/0:24,0:24:65.41:0,65,2340	./.	1/1:30,1:31:3:25,3,0	0/0:26,0:26:63.19:0,63,2572	0/0:54,0:54:99:0,147,5865	0/0:24,0:24:57.20:0,57,2449	0/0:8,0:8:18.06:0,18,753
chr10	35108966	.	GACAC	G	110.32	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=6.888;DP=1014;FS=14.937;HRun=0;HaplotypeScore=249.3501;InbreedingCoeff=0.7714;MQ=55.00;MQ0=23;MQRankSum=0.676;QD=1.25;ReadPosRankSum=-5.677;VQSLOD=0.1398;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:51:4.89:0,5,1761	0/1:7,0:6:8.74:9,0,190	0/0:49,0:19:27.73:0,28,546	0/0:80,0:20:34.75:0,35,441	0/0:31,0:31:54.07:0,54,933	0/0:20,0:21:60.21:0,60,1478	0/0:36,0:36:95.76:0,96,1947	0/0:71,0:67:99:0,189,3798	0/0:31,0:30:60.18:0,60,1218	0/0:39,0:39:99:0,111,2288	0/0:24,0:24:63.20:0,63,1341	1/1:20,13:33:15.67:140,16,0	0/0:34,0:34:99:0,99,2327	0/0:33,0:33:96.31:0,96,2227	0/0:43,0:43:99:0,123,2824	0/0:38,0:38:99:0,114,2672	0/0:40,0:40:99:0,103,1824	0/0:32,0:32:63.29:0,63,1779	0/0:29,0:20:57.07:0,57,1133	0/0:32,0:32:81.15:0,81,1817	0/0:78,0:79:99:0,208,4596	0/0:24,0:24:63.16:0,63,1366	1/1:16,7:22:11.47:69,11,0	1/1:19,5:25:7.49:26,7,0	0/0:22,0:22:60.19:0,60,1382	0/0:52,0:52:99:0,141,3135	0/0:25,0:25:75.17:0,75,1764	0/0:8,0:8:20.99:0,21,290
chr10	35108978	.	G	GAC	1389.10	PASS	AB=0.930;AC=11;AF=0.196;AN=56;BaseQRankSum=2.534;DP=982;FS=13.265;HRun=0;HaplotypeScore=219.0600;InbreedingCoeff=0.4208;MQ=53.83;MQ0=35;MQRankSum=3.500;QD=5.79;ReadPosRankSum=-4.095;VQSLOD=1.3407;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:41,6:53:99:370,0,727	0/1:8,0:7:53.81:65,0,54	0/0:42,0:12:19.54:0,20,302	0/0:76,0:15:20.38:0,20,151	0/1:27,1:27:86.19:86,0,230	0/0:25,0:25:69.18:0,69,963	0/0:35,0:35:86.90:0,87,1163	0/0:62,0:56:99:0,145,2267	0/1:26,1:26:67.30:67,0,199	0/0:39,0:38:99:0,108,1466	0/0:20,0:20:48.16:0,48,731	1/1:25,10:36:26.06:358,26,0	0/0:34,0:34:95.31:0,95,1357	0/0:29,0:29:84.27:0,84,1246	0/0:47,0:47:99:0,135,1921	0/0:41,0:41:99:0,117,1714	0/1:34,3:37:99:205,0,290	0/0:31,1:32:44.59:0,45,1111	0/0:25,0:14:42.11:0,42,586	0/0:30,0:30:89.63:0,90,1255	0/0:78,0:77:99:0,210,2939	0/0:26,0:26:72.17:0,72,979	1/1:19,5:23:14.94:205,15,0	1/1:23,2:25:15.03:198,15,0	0/0:25,0:25:66.09:0,66,875	0/0:42,0:42:99:0,117,1732	0/0:27,0:26:81.21:0,81,1176	0/0:7,0:6:14.99:0,15,174
chr10	35108996	.	C	CAG	2472.06	PASS	AB=0.980;AC=10;AF=0.179;AN=56;BaseQRankSum=9.069;DP=969;FS=3.435;HRun=0;HaplotypeScore=208.4367;InbreedingCoeff=0.5257;MQ=53.62;MQ0=31;MQRankSum=0.594;QD=9.36;ReadPosRankSum=3.824;VQSLOD=3.5692;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:54,3:54:99:125,0,678	0/1:13,0:12:50.88:51,0,320	0/0:26,0:5:6.02:0,6,84	0/1:69,0:7:2.28:2,0,34	1/1:7,19:24:26.82:428,27,0	0/0:24,0:24:63.17:0,63,844	0/0:27,0:27:66.67:0,67,921	0/0:54,0:48:99:0,135,1821	1/1:5,21:27:41.22:595,41,0	0/0:30,0:29:78.26:0,78,1101	0/0:22,0:22:51.16:0,51,708	0/0:38,0:38:18.10:0,18,346	0/0:37,0:37:99:0,108,1515	0/0:29,0:29:78.22:0,78,1076	0/0:47,0:47:99:0,135,1887	0/0:46,0:46:99:0,132,1866	1/1:13,22:36:79.39:1415,79,0	0/1:33,1:34:13.36:13,0,976	0/0:25,0:18:45.09:0,45,577	0/0:33,0:32:83.83:0,84,1165	0/0:77,0:76:99:0,208,2873	0/0:28,0:28:72.23:0,72,1007	0/0:22,0:21:24.03:0,24,285	0/0:33,0:33:13.54:0,14,166	0/0:22,0:22:53.98:0,54,707	0/0:35,0:34:93.19:0,93,1231	0/0:33,0:32:93.24:0,93,1252	0/0:17,0:16:30.10:0,30,416
chr10	35109006	.	GAGAC	G	1407.23	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=3.849;DP=992;FS=1.062;HRun=0;HaplotypeScore=241.6294;InbreedingCoeff=0.8918;MQ=52.20;MQ0=32;MQRankSum=3.035;QD=14.81;ReadPosRankSum=1.712;VQSLOD=3.3652;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:53:87.30:0,87,2046	0/0:14,0:13:30.09:0,30,710	0/0:31,0:2:6.02:0,6,122	0/0:74,0:10:4.60:0,5,84	1/1:27,3:28:47.72:592,48,0	0/0:26,0:26:63.08:0,63,1415	0/0:28,0:28:69.21:0,69,1542	0/0:55,0:50:99:0,114,2182	1/1:29,2:31:31.78:509,32,0	0/0:38,0:37:99:0,105,2158	0/0:23,0:23:54.05:0,54,1039	0/0:32,0:32:44.98:0,45,1115	0/0:44,0:44:99:0,126,2577	0/0:31,0:31:87.23:0,87,1850	0/0:49,0:49:99:0,135,2939	0/0:44,0:44:99:0,114,2619	1/1:29,5:34:43.72:449,44,0	0/0:33,1:34:6.80:0,7,1511	0/0:19,0:16:36.10:0,36,658	0/0:34,0:33:84.27:0,84,1820	0/0:75,0:74:99:0,196,4382	0/0:28,0:28:63.22:0,63,1411	0/0:26,0:24:45.12:0,45,931	0/0:37,0:37:33.03:0,33,725	0/0:21,0:21:54.58:0,55,1214	0/0:31,0:30:81.28:0,81,1747	0/0:30,0:29:81.19:0,81,2001	0/0:17,0:16:45.15:0,45,992
chr10	35109412	.	A	AG	914.77	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-4.574;DP=476;FS=9.378;HRun=6;HaplotypeScore=48.4483;InbreedingCoeff=0.9545;MQ=74.31;MQ0=0;MQRankSum=-3.695;QD=19.89;ReadPosRankSum=3.504;VQSLOD=2.3232;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:78.17:0,78,796	0/0:3,0:3:6.01:0,6,61	0/0:10,0:10:30.03:0,30,295	0/0:12,0:11:16.65:0,17,174	0/0:21,0:21:57.13:0,57,580	0/0:24,0:24:69.16:0,69,703	0/0:20,0:20:57.10:0,57,567	0/0:17,0:17:33.06:0,33,335	0/0:10,0:10:27.03:0,27,267	0/0:21,0:21:51.11:0,51,516	0/0:15,0:15:32.86:0,33,317	1/1:2,16:18:21.07:264,21,0	0/0:14,0:14:36.07:0,36,361	0/0:7,0:7:18.04:0,18,184	0/0:21,0:21:51.11:0,51,520	0/0:13,0:13:33.05:0,33,329	0/0:28,0:28:75.17:0,75,765	0/0:11,0:11:30.07:0,30,306	0/0:21,0:21:54.10:0,54,539	0/0:22,0:22:54.11:0,54,551	0/0:14,0:14:36.08:0,36,367	0/0:13,0:13:39.05:0,39,387	1/1:1,13:14:33.11:415,33,0	1/1:1,13:14:30.10:377,30,0	0/0:24,0:24:60.13:0,60,611	0/0:20,0:20:57.13:0,57,581	0/0:22,0:22:63.14:0,63,642	0/0:18,0:18:51.11:0,51,519
chr10	35109711	.	GAC	G	32.14	PASS	AB=0.941;AC=8;AF=0.148;AN=54;BaseQRankSum=3.083;DP=630;FS=19.685;HRun=0;HaplotypeScore=112.3307;InbreedingCoeff=0.0306;MQ=65.98;MQ0=16;MQRankSum=-0.939;QD=0.17;ReadPosRankSum=-0.833;VQSLOD=0.8818;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,1:26:13.69:0,14,651	0/1:2,0:2:0:0,0,0	0/1:57,1:26:21.86:28,0,22	0/0:62,0:28:0.72:0,1,26	0/0:22,0:22:18.92:0,19,447	0/0:17,0:17:35.76:0,36,369	0/1:28,3:30:41.83:42,0,476	0/0:35,1:34:10.30:0,10,281	0/0:18,0:17:36.10:0,36,507	0/0:21,0:21:37.39:0,37,348	0/0:12,0:12:14.87:0,15,144	0/0:4,0:14:2.93:0,3,26	0/0:15,0:15:39.11:0,39,434	0/0:19,0:19:38.43:0,38,388	0/0:23,1:24:19.27:0,19,512	0/0:26,0:26:57.14:0,57,623	0/1:29,2:32:25.92:26,0,662	0/0:20,0:20:42.01:0,42,444	0/1:20,2:22:38.27:38,0,312	0/0:11,0:11:23.34:0,23,220	0/0:35,2:37:50.75:0,51,832	0/0:15,1:15:23.74:0,24,251	./.	1/1:4,0:21:0.47:1,0,0	0/0:14,0:14:29.75:0,30,311	0/0:14,0:14:35.30:0,35,366	0/1:22,2:24:9.03:9,0,493	0/0:5,0:3:9.02:0,9,99
chr10	35110278	.	G	GT	442.68	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.978;DP=518;FS=0.000;HRun=0;HaplotypeScore=94.0162;InbreedingCoeff=0.8174;MQ=71.96;MQ0=0;MQRankSum=-0.405;QD=21.08;ReadPosRankSum=-2.670;VQSLOD=4.0249;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,16:21:34.70:537,35,0	0/0:4,0:4:11.53:0,12,63	0/0:22,0:17:50.52:0,51,633	0/0:23,0:20:43.31:0,43,562	0/0:19,0:19:53.12:0,53,386	0/0:20,0:20:48.32:0,48,280	0/0:7,0:7:14.86:0,15,81	0/0:31,0:31:54.62:0,55,401	0/0:23,0:23:60.94:0,61,343	0/0:20,0:20:51.52:0,52,282	0/0:9,0:9:26.38:0,26,177	0/0:17,0:17:51.06:0,51,650	0/0:20,0:20:45.88:0,46,281	0/0:13,0:13:34.98:0,35,202	0/0:20,0:20:53.81:0,54,305	0/0:19,0:19:47.69:0,48,279	0/0:27,0:27:48.88:0,49,363	0/0:21,0:21:55.10:0,55,310	0/0:22,0:22:5.48:0,5,186	0/0:18,0:18:51.35:0,51,321	0/0:23,0:23:54.20:0,54,332	0/0:11,0:11:28.16:0,28,160	0/0:14,0:14:42.12:0,42,567	0/0:18,0:18:48.12:0,48,647	0/0:15,0:15:40.85:0,41,255	0/0:18,0:18:9.53:0,10,182	0/0:29,0:28:68.20:0,68,478	0/0:14,0:14:35.59:0,36,213
chr10	35110279	.	G	GT	766.59	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=-3.230;DP=512;FS=6.448;HRun=8;HaplotypeScore=89.5853;InbreedingCoeff=0.3279;MQ=71.27;MQ0=0;MQRankSum=-2.006;QD=6.84;ReadPosRankSum=-6.705;VQSLOD=-0.2720;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:21:51.15:584,51,0	1/1:0,4:4:12.04:139,12,0	0/0:22,0:17:35.10:0,35,268	0/0:22,0:19:12.59:0,13,231	0/0:19,0:19:18.51:0,19,162	0/0:20,0:20:17.60:0,18,127	0/1:8,0:8:12.10:15,0,12	0/1:30,0:30:68.92:69,0,119	0/0:23,0:23:25.76:0,26,147	0/1:19,0:19:40.20:40,0,81	0/0:9,0:9:23.24:0,23,105	0/0:18,0:18:18.48:0,18,392	0/0:20,0:20:15.03:0,15,124	0/0:13,0:13:29.42:0,29,109	0/0:20,0:20:44.05:0,44,161	0/0:18,0:18:36.78:0,37,144	0/0:27,0:27:31.83:0,32,177	0/0:21,0:21:7.46:0,7,116	0/1:21,0:21:62.30:62,0,63	0/0:18,0:18:42.74:0,43,189	0/0:23,0:23:25.76:0,26,135	0/1:9,0:9:3.42:3,0,54	0/0:14,0:14:39:0,39,351	0/0:18,0:18:47.92:0,48,419	0/0:15,0:15:13.78:0,14,101	0/0:17,0:17:10.53:0,11,84	0/0:29,0:28:36.12:0,36,242	0/0:14,0:14:11.76:0,12,98
chr10	35112379	.	G	GT	1295.29	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-7.247;DP=654;FS=0.633;HRun=6;HaplotypeScore=61.0886;InbreedingCoeff=0.9997;MQ=86.66;MQ0=0;MQRankSum=-4.422;QD=30.12;ReadPosRankSum=1.632;VQSLOD=4.3219;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,41:43:99:1390,111,0	0/0:11,0:11:33.08:0,33,337	0/0:27,0:27:69.15:0,69,702	0/0:28,0:28:61.80:0,62,579	0/0:23,0:22:63.11:0,63,629	0/0:18,0:18:45.10:0,45,459	0/0:19,0:19:51.11:0,51,520	0/0:24,0:24:63.12:0,63,630	0/0:21,0:21:57.12:0,57,575	0/0:31,0:31:89.94:0,90,917	0/0:16,0:16:48.11:0,48,489	0/0:16,0:16:45.10:0,45,459	0/0:16,0:16:45.10:0,45,459	0/0:21,0:21:60.14:0,60,612	0/0:21,0:21:63.14:0,63,643	0/0:23,0:23:66.15:0,66,673	0/0:26,0:26:72.16:0,72,734	0/0:20,0:20:54.12:0,54,551	0/0:25,0:25:54.09:0,54,544	0/0:27,0:27:66.14:0,66,672	0/0:22,0:22:63.14:0,63,642	0/0:27,0:27:75.16:0,75,765	0/0:21,0:21:57.13:0,57,581	0/0:22,0:22:63.12:0,63,634	0/0:34,0:34:93.17:0,93,938	0/0:27,0:27:72.16:0,72,734	0/0:19,0:19:48.08:0,48,482	0/0:26,0:26:75.17:0,75,765
chr10	35113481	.	G	GT	130.46	PASS	AC=6;AF=0.120;AN=50;BaseQRankSum=-0.134;DP=234;FS=1.415;HRun=0;HaplotypeScore=136.9770;InbreedingCoeff=0.6755;MQ=48.89;MQ0=0;MQRankSum=-0.828;QD=8.70;ReadPosRankSum=-0.200;VQSLOD=3.2975;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:9:8.97:0,9,71	0/0:6,0:6:17.94:0,18,137	0/0:3,0:3:0.24:0,0,32	0/0:3,0:3:5.93:0,6,48	0/0:11,0:11:20.96:0,21,169	0/0:8,0:7:11.89:0,12,88	0/0:10,0:10:23.78:0,24,174	0/0:25,0:25:49.50:0,49,345	0/0:8,0:8:20.95:0,21,166	0/0:19,0:18:53.63:0,54,386	./.	1/1:1,4:5:6.02:87,6,0	0/0:9,0:9:23.94:0,24,189	0/0:13,0:13:19.78:0,20,256	0/0:11,0:11:26.81:0,27,200	0/0:6,0:6:11.89:0,12,89	0/0:6,0:6:8.97:0,9,70	./.	0/0:13,0:13:26.83:0,27,208	0/0:9,0:9:11.95:0,12,94	./.	0/0:8,0:8:20.94:0,21,167	1/1:1,5:6:5.49:79,5,0	1/1:0,4:4:6.02:78,6,0	0/0:8,0:8:20.95:0,21,165	0/0:13,0:13:17.79:0,18,221	0/0:10,0:10:29.88:0,30,227	0/0:4,0:4:11.88:0,12,83
chr10	35113551	.	TC	T	69.69	PASS	AB=0.735;AC=2;AF=0.036;AN=56;BaseQRankSum=-4.587;DP=273;FS=1.624;HRun=3;HaplotypeScore=194.7965;InbreedingCoeff=-0.0493;MQ=67.20;MQ0=0;MQRankSum=4.123;QD=4.10;ReadPosRankSum=-1.970;VQSLOD=-0.5415;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:23:57.62:0,58,416	0/0:4,0:4:11.87:0,12,81	0/1:4,3:7:63.08:111,0,63	0/1:7,3:10:47.38:47,0,60	0/0:8,0:8:14.75:0,15,94	0/0:15,0:15:41.71:0,42,308	0/0:14,0:14:38.73:0,39,285	0/0:8,0:8:14.97:0,15,120	0/0:14,0:14:38.75:0,39,288	0/0:12,0:12:35.98:0,36,326	0/0:5,0:5:14.81:0,15,99	0/0:17,0:17:41.66:0,42,313	0/0:8,0:8:13.71:0,14,87	0/0:10,0:10:23.81:0,24,169	0/0:12,0:12:35.67:0,36,247	0/0:8,0:8:20.36:0,20,137	0/0:12,0:12:23.83:0,24,171	0/0:9,0:9:17.94:0,18,139	0/0:6,0:6:17.82:0,18,143	0/0:5,0:5:14.87:0,15,105	0/0:7,0:7:11.89:0,12,81	0/0:7,0:7:17.79:0,18,118	0/0:6,0:6:14.83:0,15,100	0/0:8,0:8:14.74:0,15,93	0/0:11,0:11:32.54:0,33,227	0/0:16,0:16:44.92:0,45,376	0/0:8,0:8:20.41:0,20,143	0/0:2,0:2:5.98:0,6,46
chr10	35113555	.	AG	A	6877.93	PASS	AB=1.000;AC=54;AF=0.964;AN=56;BaseQRankSum=2.224;DP=271;FS=0.000;HRun=6;HaplotypeScore=170.1084;InbreedingCoeff=-0.0467;MQ=63.82;MQ0=0;MQRankSum=-2.359;QD=25.38;ReadPosRankSum=2.427;VQSLOD=2.6817;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,23:23:63.15:670,63,0	1/1:0,4:4:12.03:129,12,0	0/1:7,0:7:13.52:71,0,14	0/1:8,0:8:10.76:95,0,11	1/1:2,6:8:15.04:161,15,0	1/1:1,14:15:39.10:418,39,0	1/1:1,13:14:36.09:386,36,0	1/1:0,8:8:15.04:161,15,0	1/1:1,13:14:36.09:386,36,0	1/1:3,9:12:27.07:289,27,0	1/1:0,5:5:15.04:161,15,0	1/1:0,17:17:39.09:414,39,0	1/1:0,8:8:15.04:161,15,0	1/1:1,9:10:24.06:256,24,0	1/1:0,12:12:36.09:386,36,0	1/1:0,8:8:21.05:225,21,0	1/1:1,11:12:24.06:257,24,0	1/1:1,8:9:18.04:193,18,0	1/1:1,5:6:15.04:161,15,0	1/1:0,5:5:15.04:161,15,0	1/1:0,7:7:12.03:129,12,0	1/1:0,7:7:18.05:193,18,0	1/1:0,6:6:15.04:161,15,0	1/1:0,8:8:15.04:161,15,0	1/1:0,11:11:33.08:354,33,0	1/1:1,15:16:42.11:451,42,0	1/1:0,8:8:21.05:226,21,0	1/1:0,2:2:6.02:64,6,0
chr10	35115022	.	GTAAATAAATAAATAAATAAA	G	10508.94	PASS	AC=40;AF=0.800;AN=50;BaseQRankSum=3.930;DP=271;FS=10.221;HRun=0;HaplotypeScore=157.0893;InbreedingCoeff=0.6226;MQ=55.19;MQ0=1;MQRankSum=-4.450;QD=48.88;ReadPosRankSum=1.475;VQSLOD=3.1919;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,7:14:24.08:1063,24,0	0/0:5,0:5:9.03:0,9,379	0/0:10,0:10:3.01:0,3,31	0/0:13,0:12:1.82:0,2,5	1/1:7,8:15:6.02:153,6,0	1/1:4,4:8:12.04:644,12,0	1/1:4,6:9:9.03:386,9,0	1/1:8,5:13:15.04:227,15,0	1/1:6,5:11:12.04:596,12,0	1/1:8,5:13:15.04:669,15,0	1/1:5,2:7:6.02:304,6,0	0/0:3,0:2:6.02:0,6,407	1/1:6,2:8:6.02:322,6,0	1/1:3,3:6:9.03:483,9,0	1/1:6,2:8:6.02:322,6,0	1/1:4,5:9:12.04:644,12,0	1/1:6,5:11:9.03:435,9,0	./.	./.	1/1:2,12:14:36.12:1608,36,0	1/1:11,1:12:9.03:261,9,0	1/1:8,5:13:9.03:371,9,0	0/0:9,0:9:9.03:0,9,756	./.	1/1:7,4:11:12.04:643,12,0	1/1:12,5:17:15.05:597,15,0	1/1:6,4:10:12.04:644,12,0	1/1:2,3:5:3.01:137,3,0
chr10	35115069	.	AGAG	A	261.50	PASS	AB=0.769;AC=6;AF=0.111;AN=54;BaseQRankSum=-1.329;DP=257;FS=5.628;HRun=0;HaplotypeScore=107.7937;InbreedingCoeff=0.3199;MQ=43.77;MQ0=6;MQRankSum=0.651;QD=6.88;ReadPosRankSum=1.379;VQSLOD=2.1816;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:13:6.93:158,7,0	0/0:3,0:3:6.02:0,6,104	0/1:8,0:5:4.33:4,0,45	0/0:5,0:3:2.58:0,3,79	0/0:15,0:15:25.90:0,26,505	0/0:10,0:8:5.99:0,6,206	0/0:19,0:14:24.07:0,24,352	0/0:3,0:3:6.02:0,6,95	0/0:10,0:9:21.07:0,21,423	0/0:8,0:7:7.04:0,7,249	0/0:9,0:9:9.42:0,9,124	1/1:4,1:2:3.01:45,3,0	0/0:4,0:4:6:0,6,95	0/0:7,0:6:14.96:0,15,179	0/0:4,0:4:12:0,12,142	0/0:10,0:8:23.97:0,24,275	0/0:24,0:14:24.08:0,24,488	0/0:6,0:5:9:0,9,98	0/0:4,0:3:9.03:0,9,143	0/0:18,0:18:45.08:0,45,549	0/0:8,0:6:8.24:0,8,83	0/0:7,0:7:2.59:0,3,100	0/1:0,6:6:5.86:164,0,6	./.	0/0:11,0:11:20.66:0,21,269	0/0:12,0:9:14.91:0,15,127	0/0:6,0:6:15.02:0,15,195	0/0:2,0:2:3:0,3,26
chr10	35115082	.	GAGA	G	292.99	PASS	AB=0.991;AC=10;AF=0.179;AN=56;BaseQRankSum=-1.420;DP=375;FS=4.665;HRun=0;HaplotypeScore=119.8952;InbreedingCoeff=-0.0103;MQ=33.18;MQ0=25;MQRankSum=0.022;QD=2.20;ReadPosRankSum=0.272;VQSLOD=1.6720;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:13,10:15:4.09:281,4,0	0/0:2,0:2:6.01:0,6,63	0/0:4,0:2:0.27:0,0,20	0/0:5,0:3:4.83:0,5,71	0/0:22,0:21:36.82:0,37,566	0/1:15,0:9:8.92:9,0,140	0/0:21,0:14:8.79:0,9,209	0/0:5,0:3:6:0,6,51	0/0:11,0:10:19.35:0,19,395	0/0:11,0:8:6.13:0,6,167	0/0:14,0:13:15.28:0,15,121	0/1:17,0:6:8.04:8,0,27	0/1:12,0:10:22.89:23,0,81	0/0:19,0:10:16.94:0,17,133	0/0:5,0:5:8.39:0,8,76	0/1:13,0:11:10.18:10,0,128	0/0:32,0:18:27.05:0,27,480	0/0:11,0:7:5.69:0,6,44	0/0:5,0:4:12:0,12,108	0/0:21,0:21:45.66:0,46,342	0/0:12,0:7:11.90:0,12,96	0/1:13,0:9:15.04:15,0,55	0/1:11,0:7:2.89:58,0,3	0/0:29,0:12:0.47:0,0,1	0/1:13,0:13:8.77:9,0,139	0/1:15,0:11:11.25:11,0,29	0/0:8,0:8:17.37:0,17,138	0/0:3,0:3:2.68:0,3,11
chr10	35115094	.	AAGG	A	791.49	PASS	AB=0.988;AC=22;AF=0.393;AN=56;BaseQRankSum=4.132;DP=494;FS=23.840;HRun=0;HaplotypeScore=108.5334;InbreedingCoeff=-0.1751;MQ=29.62;MQ0=63;MQRankSum=-2.339;QD=2.78;ReadPosRankSum=3.742;VQSLOD=0.2365;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:18:15.61:0,16,102	0/0:2,0:2:6:0,6,54	0/0:3,0:1:2.96:0,3,19	0/0:4,0:2:5.23:0,5,74	0/0:25,0:22:39.19:0,39,715	0/1:18,1:11:35.53:79,0,36	0/1:24,0:12:30.97:31,0,31	1/1:5,0:1:3:26,3,0	0/0:13,0:11:27.09:0,27,487	0/1:17,0:11:11.96:12,0,254	0/1:16,1:12:38.59:39,0,89	0/0:28,0:12:9.03:0,9,172	0/1:22,0:15:6.58:7,0,57	0/1:28,0:12:27.73:28,0,40	0/1:9,0:8:32.70:33,0,54	1/1:13,0:10:11.43:125,11,0	0/0:42,0:28:21.03:0,21,386	0/1:15,0:8:14.05:15,0,14	0/1:4,0:2:14.96:15,0,48	0/1:21,0:19:87.17:144,0,87	0/1:19,0:8:14.54:15,0,46	1/1:16,1:11:5.98:67,6,0	0/0:17,0:10:10.09:0,10,219	0/0:48,0:17:9.39:0,9,70	0/1:13,1:13:43.91:179,0,44	0/1:22,0:17:92.84:93,0,221	0/1:13,0:11:28.11:28,0,58	1/1:6,0:4:2.98:22,3,0
chr10	35118617	.	C	CAA	12341.49	PASS	AB=0.583;AC=51;AF=0.911;AN=56;BaseQRankSum=-6.474;DP=570;FS=8.946;HRun=2;HaplotypeScore=81.7992;InbreedingCoeff=0.5806;MQ=67.72;MQ0=8;MQRankSum=-0.639;QD=23.42;ReadPosRankSum=1.078;VQSLOD=2.6237;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,0:28:27.08:328,27,0	0/1:2,0:7:7.85:90,0,8	0/0:26,0:12:16.59:0,17,144	0/0:17,0:9:14.03:0,14,110	1/1:3,22:25:54.67:624,55,0	1/1:3,14:18:0.36:421,0,0	1/1:2,19:21:2.88:227,3,0	1/1:1,24:26:78:846,78,0	1/1:10,5:15:39.51:491,40,0	1/1:3,14:17:36.03:477,36,0	1/1:2,14:16:44.77:516,45,0	1/1:0,2:19:21.07:301,21,0	1/1:1,18:19:27.42:608,27,0	1/1:2,16:18:17.38:489,17,0	1/1:0,12:12:15.05:280,15,0	1/1:2,17:19:33.11:616,33,0	1/1:6,27:34:8.34:635,8,0	1/1:10,12:21:35.65:773,36,0	1/1:2,21:23:65.70:707,66,0	1/1:3,15:19:38.84:446,39,0	1/1:4,12:16:2.43:208,2,0	1/1:1,11:12:29.89:380,30,0	1/1:0,0:24:23.90:284,24,0	1/1:0,2:23:27.08:351,27,0	1/1:2,17:20:24.55:447,25,0	1/1:5,22:27:68.77:827,69,0	1/1:5,19:26:35.32:581,35,0	1/1:3,16:19:21.07:391,21,0
chr10	35120617	.	C	CA	4035.99	PASS	AB=0.758;AC=46;AF=0.821;AN=56;BaseQRankSum=0.114;DP=499;FS=1.690;HRun=13;HaplotypeScore=97.8628;InbreedingCoeff=0.0143;MQ=47.56;MQ0=22;MQRankSum=-1.657;QD=8.22;ReadPosRankSum=0.594;VQSLOD=2.9875;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:31:55.08:301,55,0	0/0:4,0:8:6.08:0,6,18	1/1:9,0:3:0.47:1,0,0	0/1:6,0:6:7.67:8,0,18	1/1:9,0:20:33.07:172,33,0	1/1:7,8:13:19.73:159,20,0	1/1:6,11:17:9.27:211,9,0	0/1:12,9:21:8.20:195,0,8	1/1:18,0:20:18.75:109,19,0	1/1:14,13:26:41.94:368,42,0	0/1:11,5:14:25.37:71,0,25	1/1:10,1:15:8.89:47,9,0	1/1:7,11:18:27.91:253,28,0	1/1:14,8:21:16.89:271,17,0	0/1:12,7:18:18.12:117,0,18	0/1:8,6:15:30.40:152,0,30	1/1:9,1:15:16.87:90,17,0	1/1:9,7:16:25.48:213,25,0	0/1:10,12:20:4.79:207,0,5	1/1:5,9:12:4.38:176,4,0	1/1:11,7:17:3.89:174,4,0	0/1:13,5:18:5.17:86,0,5	1/1:5,0:10:8.99:44,9,0	1/1:16,1:23:14.69:161,15,0	0/1:14,6:18:25.30:61,0,25	1/1:13,1:25:31.99:175,32,0	1/1:10,7:15:11.43:158,11,0	1/1:7,3:8:6.01:56,6,0
chr10	35120654	.	TAC	T	610.52	PASS	AB=0.942;AC=33;AF=0.717;AN=46;BaseQRankSum=2.170;DP=418;FS=0.000;HRun=0;HaplotypeScore=92.8003;InbreedingCoeff=0.2258;MQ=52.46;MQ0=14;MQRankSum=-2.110;QD=2.24;ReadPosRankSum=2.065;VQSLOD=0.9828;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:16:2.83:14,3,0	1/1:3,0:6:5.68:28,6,0	./.	./.	0/0:14,0:14:5.92:0,6,42	0/0:10,0:10:2.99:0,3,24	0/1:19,2:21:51.21:52,0,51	./.	1/1:10,1:13:8.72:71,9,0	1/1:17,0:18:8.13:36,8,0	./.	0/0:14,0:15:16.17:0,16,138	1/1:9,0:10:3.31:15,3,0	1/1:7,1:8:6.01:64,6,0	1/1:13,1:13:3:32,3,0	1/1:9,2:11:11.45:87,11,0	0/1:13,3:13:47.46:111,0,47	1/1:16,0:17:5.58:26,6,0	1/1:18,0:17:2.80:13,3,0	0/1:9,0:9:0:0,0,0	0/1:27,0:26:6.87:7,0,58	1/1:13,1:13:8.93:80,9,0	./.	0/0:28,0:27:9.74:0,10,78	1/1:11,1:12:6.73:48,7,0	0/1:19,0:20:23.86:24,0,31	1/1:12,0:12:1.88:12,2,0	1/1:8,1:9:3:32,3,0
chr10	35120950	.	T	TC	16139.05	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-15.430;DP=759;FS=2.495;HRun=5;HaplotypeScore=79.2662;InbreedingCoeff=0.9938;MQ=77.92;MQ0=0;MQRankSum=-0.245;QD=32.60;ReadPosRankSum=0.829;VQSLOD=5.3858;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,111,1193	0/0:6,0:6:15.04:0,15,161	0/0:15,0:15:36.07:0,36,378	0/0:18,0:18:17.69:0,18,255	0/0:19,0:19:45.11:0,45,482	1/1:1,16:17:48.15:625,48,0	1/1:6,32:38:96.31:1263,96,0	1/1:7,29:35:87.23:1092,87,0	0/0:39,0:39:96.23:0,96,1031	1/1:5,28:33:72.18:894,72,0	1/1:1,12:13:36.12:464,36,0	0/0:45,0:45:99:0,129,1378	1/1:1,37:38:99:1302,99,0	1/1:0,31:31:84.27:1092,84,0	1/1:2,32:34:89.85:1184,90,0	1/1:0,24:24:60.20:790,60,0	0/0:20,0:20:51.12:0,51,547	1/1:2,24:26:72.23:938,72,0	1/1:12,13:25:59.95:731,60,0	1/1:2,11:14:30.10:391,30,0	1/1:3,76:79:99:2645,202,0	1/1:2,16:18:39.13:513,39,0	0/0:10,0:10:18.04:0,18,192	0/0:51,0:51:99:0,150,1602	1/1:2,14:16:36.12:474,36,0	1/1:5,19:24:57.16:722,57,0	1/1:1,22:23:60.19:782,60,0	1/1:0,6:6:18.06:237,18,0
chr10	35122652	.	GA	G	22483.35	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=8.303;DP=745;FS=3.211;HRun=1;HaplotypeScore=77.7228;InbreedingCoeff=0.9984;MQ=82.65;MQ0=0;MQRankSum=-4.644;QD=39.44;ReadPosRankSum=2.151;VQSLOD=5.6535;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,144,2296	0/0:6,0:6:18.06:0,18,288	0/0:21,0:21:60.20:0,60,953	0/0:22,0:22:60.18:0,60,930	1/1:0,36:36:99:1469,105,0	1/1:0,16:16:42.14:587,42,0	1/1:0,31:31:84.24:1153,84,0	1/1:0,35:35:99:1363,99,0	1/1:0,22:22:63.21:881,63,0	1/1:0,30:30:90.27:1224,90,0	1/1:0,19:19:54.18:752,54,0	0/0:21,0:20:54.18:0,54,863	1/1:0,20:20:57.19:797,57,0	1/1:0,24:24:60.20:839,60,0	1/1:0,38:37:99:1511,108,0	1/1:0,26:26:72.24:1007,72,0	1/1:0,31:31:90.30:1259,90,0	1/1:0,28:28:78.26:1091,78,0	1/1:0,23:23:69.23:964,69,0	1/1:0,19:19:54.18:755,54,0	1/1:0,43:43:99:1762,126,0	1/1:0,26:26:72.24:1003,72,0	0/0:19,0:19:57.18:0,57,888	0/0:37,0:37:99:0,111,1701	1/1:0,27:27:75.25:1049,75,0	1/1:0,35:34:99:1426,102,0	1/1:0,30:30:84.28:1171,84,0	1/1:0,11:11:30.10:419,30,0
chr10	35122809	.	C	CTTT	6289.50	PASS	AB=0.590;AC=41;AF=0.732;AN=56;BaseQRankSum=-2.605;DP=606;FS=7.154;HRun=15;HaplotypeScore=115.1490;InbreedingCoeff=0.4765;MQ=69.86;MQ0=5;MQRankSum=-2.689;QD=12.86;ReadPosRankSum=-2.088;VQSLOD=2.3440;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:9,0:22:16.36:26,0,16	0/1:5,0:12:3.44:3,0,45	0/0:40,0:25:25.76:0,26,194	0/0:26,0:15:3.02:0,3,44	0/0:7,0:24:31.05:0,31,210	0/1:2,1:13:5.48:195,0,5	1/1:6,5:15:18.01:232,18,0	1/1:18,1:29:39.51:450,40,0	0/0:2,0:7:11.61:0,12,69	1/1:24,0:27:8.97:401,9,0	1/1:6,11:23:49.11:543,49,0	1/1:1,1:16:27.97:226,28,0	1/1:11,9:23:23.98:319,24,0	1/1:8,8:19:18.87:243,19,0	1/1:9,15:27:22.58:292,23,0	1/1:10,9:21:18.01:246,18,0	0/0:8,0:19:28.86:0,29,176	1/1:7,9:18:12.91:177,13,0	1/1:9,2:19:25.26:283,25,0	1/1:18,2:25:44.82:493,45,0	1/1:1,0:1:3.01:35,3,0	1/1:3,9:14:27.49:367,27,0	0/1:5,0:22:30.45:125,0,30	0/1:6,0:21:22.03:112,0,22	1/1:10,19:34:0.52:286,1,0	1/1:6,3:30:60.01:735,60,0	1/1:13,18:34:24.05:339,24,0	1/1:3,1:12:12.02:160,12,0
chr10	35123657	.	G	GT	384.91	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-3.502;DP=631;FS=1.227;HRun=0;HaplotypeScore=62.5273;InbreedingCoeff=0.9830;MQ=85.43;MQ0=0;MQRankSum=-1.989;QD=38.49;ReadPosRankSum=0.909;VQSLOD=3.8545;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:45.15:0,45,627	1/1:0,10:10:30.10:479,30,0	0/0:24,0:24:69.19:0,69,905	0/0:21,0:21:57.19:0,57,782	0/0:31,0:31:90.28:0,90,1240	0/0:25,0:25:75.23:0,75,1029	0/0:18,0:18:54.18:0,54,755	0/0:42,0:42:99:0,120,1648	0/0:17,0:17:51.11:0,51,673	0/0:26,0:26:72.24:0,72,1005	0/0:21,0:21:57.19:0,57,797	0/0:18,0:18:54.17:0,54,737	0/0:23,0:23:69.23:0,69,965	0/0:23,0:23:69.23:0,69,965	0/0:30,0:30:90.30:0,90,1258	0/0:25,0:25:72.24:0,72,1005	0/0:19,0:19:57.17:0,57,778	0/0:9,0:9:27.09:0,27,378	0/0:25,0:25:72.24:0,72,1005	0/0:34,0:34:99:0,102,1419	0/0:31,0:31:93.31:0,93,1300	0/0:20,0:20:54.17:0,54,738	0/0:24,0:24:69.23:0,69,965	0/0:14,0:14:42.11:0,42,567	0/0:23,0:23:66.21:0,66,907	0/0:33,0:33:99:0,99,1383	0/0:24,0:24:72.22:0,72,985	0/0:5,0:5:15.05:0,15,210
chr10	35123903	.	TACACACACACACACACACAC	T	11108.51	PASS	AB=0.847;AC=35;AF=0.648;AN=54;BaseQRankSum=1.820;DP=583;FS=9.715;HRun=0;HaplotypeScore=297.1374;InbreedingCoeff=0.6084;MQ=55.52;MQ0=5;MQRankSum=-2.899;QD=28.12;ReadPosRankSum=1.670;VQSLOD=2.2595;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:22,7:29:11.71:491,12,0	0/1:5,0:8:38.39:94,0,38	0/0:23,0:15:3.01:0,3,118	0/0:24,0:13:15.05:0,15,396	0/0:21,0:30:24.03:0,24,516	1/1:11,7:18:5.37:788,5,0	1/1:14,2:16:15.02:492,15,0	0/1:18,0:18:1.73:44,0,2	0/0:9,0:15:13.22:0,13,197	1/1:16,6:22:18.06:860,18,0	1/1:8,6:14:23.82:1061,24,0	0/0:13,0:24:41.87:0,42,1054	1/1:8,12:21:27.09:1420,27,0	1/1:18,8:26:6.02:320,6,0	1/1:16,11:27:21.07:1100,21,0	1/1:22,5:27:3.01:160,3,0	0/0:13,0:14:23.19:0,23,497	0/1:14,3:15:98.72:153,0,99	1/1:17,0:18:5.86:230,6,0	1/1:13,10:24:24.08:1029,24,0	1/1:23,0:23:2.99:24,3,0	./.	0/0:9,0:11:9.03:0,9,220	0/0:17,0:26:24.97:0,25,1192	1/1:8,13:20:21.07:1103,21,0	1/1:17,12:29:23.72:617,24,0	1/1:17,13:30:17.57:960,18,0	1/1:2,2:4:3.01:160,3,0
chr10	35124133	.	AGAG	A	536.29	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=-5.351;DP=584;FS=10.224;HRun=0;HaplotypeScore=184.3329;InbreedingCoeff=0.4691;MQ=60.22;MQ0=1;MQRankSum=0.498;QD=28.23;ReadPosRankSum=-5.199;VQSLOD=1.7156;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:25.29:0,25,372	1/1:1,13:14:39.13:624,39,0	0/0:18,0:18:41.25:0,41,768	0/0:22,0:18:23.26:0,23,597	0/0:26,0:26:54.37:0,54,754	0/0:20,0:20:36.06:0,36,462	0/0:20,0:20:33.66:0,34,551	0/0:18,0:18:44.94:0,45,452	0/0:12,0:12:1.91:0,2,203	0/0:25,0:25:75.16:0,75,975	0/0:23,0:23:37.49:0,37,507	0/0:20,0:20:30.09:0,30,377	0/0:21,0:21:42.14:0,42,540	0/0:24,0:24:45.05:0,45,548	0/0:23,0:23:9.85:0,10,497	0/0:27,0:27:24.45:0,24,527	0/0:16,0:17:24.88:0,25,265	0/0:15,0:15:10.05:0,10,184	0/0:21,0:20:29.69:0,30,503	0/0:22,0:21:36.54:0,37,567	0/0:13,0:13:2.31:0,2,144	0/0:20,0:20:50.96:0,51,618	0/0:18,0:18:29.77:0,30,492	0/0:23,0:23:44.92:0,45,508	0/0:19,0:19:25.51:0,26,430	0/0:44,0:44:98.64:0,99,1361	0/0:30,0:30:36.64:0,37,579	0/1:5,0:5:17.01:17,0,78
chr10	35124136	.	G	GGAGGAA	31102.15	PASS	AB=0.750;AC=49;AF=0.875;AN=56;BaseQRankSum=-7.885;DP=650;FS=21.731;HRun=0;HaplotypeScore=114.6736;InbreedingCoeff=0.8644;MQ=58.07;MQ0=1;MQRankSum=-6.588;QD=52.10;ReadPosRankSum=1.045;VQSLOD=3.3941;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,20:30:25.90:768,26,0	0/0:14,0:14:35.98:0,36,421	0/0:18,0:18:29.54:0,30,596	0/0:21,0:17:21.10:0,21,505	1/1:4,21:28:63.11:1461,63,0	1/1:2,18:21:33.11:1107,33,0	1/1:3,18:22:39.13:1223,39,0	1/1:5,17:23:50.44:946,50,0	1/1:2,10:13:21.07:695,21,0	1/1:4,25:31:78.21:2184,78,0	1/1:3,24:27:42.14:1110,42,0	1/1:1,19:21:27.09:926,27,0	1/1:1,23:26:42.14:1420,42,0	1/1:2,23:26:42.14:1359,42,0	1/1:3,23:29:42.14:1417,42,0	1/1:3,21:26:42.14:1434,42,0	1/1:3,11:15:24.04:680,24,0	0/1:10,5:15:4.62:544,0,5	1/1:7,18:25:57.18:1466,57,0	1/1:4,18:25:54.12:1505,54,0	1/1:3,10:13:15.05:437,15,0	1/1:2,20:22:45.15:1447,45,0	1/1:2,16:20:36.12:1081,36,0	1/1:5,19:25:33:977,33,0	1/1:2,20:23:33.11:1115,33,0	1/1:9,41:52:73.41:3846,73,0	1/1:3,24:30:47.99:1587,48,0	1/1:5,2:7:20.74:366,21,0
chr10	35124275	.	A	AAGC	9581.63	PASS	AB=0.606;AC=34;AF=0.607;AN=56;BaseQRankSum=-10.418;DP=624;FS=5.341;HRun=0;HaplotypeScore=99.2973;InbreedingCoeff=0.8028;MQ=60.93;MQ0=7;MQRankSum=-0.985;QD=23.83;ReadPosRankSum=3.038;VQSLOD=4.7356;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:69.15:0,69,882	0/0:6,0:6:8.71:0,9,125	0/0:25,0:16:17.18:0,17,299	0/0:32,0:25:35:0,35,447	0/0:4,0:24:29.76:0,30,210	1/1:9,10:19:24.08:486,24,0	1/1:10,29:39:48.16:950,48,0	1/1:15,5:18:15.52:273,16,0	0/0:3,0:14:17.86:0,18,127	0/1:8,7:16:15.53:392,0,16	1/1:8,5:13:6.01:89,6,0	0/0:22,0:22:54.13:0,54,736	1/1:18,8:26:8.43:820,8,0	1/1:7,19:26:45.15:908,45,0	1/1:5,17:23:29.97:607,30,0	1/1:8,13:22:27.09:546,27,0	0/0:4,0:12:17.86:0,18,127	1/1:5,20:25:39.13:776,39,0	1/1:19,3:22:17.32:457,17,0	1/1:6,9:13:15.52:304,16,0	1/1:15,27:47:48.16:959,48,0	1/1:10,8:18:12.04:213,12,0	0/0:14,0:14:24.07:0,24,320	0/0:41,0:41:78.24:0,78,1082	1/1:8,9:16:15.05:304,15,0	1/1:17,5:22:20.07:508,20,0	1/1:6,12:19:33.11:649,33,0	0/1:2,10:12:21.69:343,0,22
chr10	35124941	.	T	TGTC	2390.60	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-6.581;DP=675;FS=8.961;HRun=0;HaplotypeScore=95.0345;InbreedingCoeff=0.9017;MQ=90.40;MQ0=0;MQRankSum=-4.731;QD=54.33;ReadPosRankSum=-0.149;VQSLOD=5.4381;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,35:44:99:2485,111,0	0/0:7,0:7:21.07:0,21,350	0/0:29,0:29:75.25:0,75,1204	0/0:29,0:28:74.15:0,74,1064	0/0:21,0:21:63.22:0,63,1049	0/0:16,0:16:45.15:0,45,750	0/0:28,0:28:78.27:0,78,1295	0/0:42,0:42:99:0,123,2024	0/0:23,0:23:66.23:0,66,1095	0/0:19,0:19:57.19:0,57,949	0/0:11,0:11:33.11:0,33,549	0/0:28,0:28:78.27:0,78,1299	0/0:37,0:37:99:0,105,1698	0/0:28,0:28:84.28:0,84,1376	0/0:20,0:20:57.19:0,57,946	0/0:25,0:25:72.25:0,72,1199	0/0:44,0:44:99:0,129,2144	0/0:17,0:17:48.16:0,48,800	0/0:26,0:26:69.22:0,69,1110	0/0:14,0:14:39.13:0,39,650	0/0:39,0:39:99:0,111,1799	0/0:14,0:14:42.14:0,42,700	0/0:18,0:18:48.16:0,48,799	0/0:23,0:23:66.23:0,66,1099	0/0:22,0:22:66.21:0,66,1070	0/0:24,0:24:72.22:0,72,1167	0/0:25,0:25:72.25:0,72,1199	0/0:2,0:2:6.02:0,6,100
chr10	35127043	.	C	CGTGTGT	4304.33	PASS	AB=1.000;AC=49;AF=0.942;AN=52;BaseQRankSum=-1.682;DP=542;FS=4.901;HRun=0;HaplotypeScore=182.6187;InbreedingCoeff=0.0853;MQ=61.60;MQ0=8;MQRankSum=0.075;QD=8.37;ReadPosRankSum=1.331;VQSLOD=3.8052;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:28:4.74:60,0,5	./.	./.	0/1:21,0:14:0:0,0,0	1/1:13,0:12:5.51:93,6,0	1/1:25,0:23:6.02:115,6,0	1/1:16,0:15:6.01:112,6,0	1/1:27,0:25:18.04:316,18,0	0/1:14,0:13:0:0,0,0	1/1:16,0:15:12.03:265,12,0	1/1:14,0:14:6.02:94,6,0	1/1:18,0:20:3.01:78,3,0	1/1:19,0:19:12.04:319,12,0	1/1:18,1:17:2.57:77,3,0	1/1:16,0:16:6.02:145,6,0	1/1:17,0:19:6.02:157,6,0	1/1:21,0:20:14.84:290,15,0	1/1:20,0:18:12.04:289,12,0	1/1:19,0:19:11.07:206,11,0	1/1:17,0:17:3.01:67,3,0	1/1:31,0:30:2.97:20,3,0	1/1:26,0:25:12.04:315,12,0	1/1:19,1:22:6.01:176,6,0	1/1:32,0:38:11.44:263,11,0	1/1:13,0:12:6.01:103,6,0	1/1:16,0:14:21.07:498,21,0	1/1:20,0:20:6.91:161,7,0	1/1:3,0:2:3.01:85,3,0
chr10	35130282	.	G	GCC	4444.83	PASS	AB=0.817;AC=36;AF=0.643;AN=56;BaseQRankSum=-6.037;DP=443;FS=1.521;HRun=9;HaplotypeScore=66.8650;InbreedingCoeff=0.7892;MQ=86.60;MQ0=0;MQRankSum=-1.106;QD=17.03;ReadPosRankSum=-2.347;VQSLOD=2.6094;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:26:57.10:0,57,607	0/0:7,0:7:12:0,12,127	0/0:23,0:24:44.10:0,44,392	0/1:19,0:21:29.86:30,0,119	0/0:24,0:24:54.06:0,54,565	1/1:5,11:21:32.01:364,32,0	1/1:5,11:18:32.08:433,32,0	1/1:7,11:20:15.03:205,15,0	0/0:15,0:16:47.86:0,48,491	1/1:1,8:9:20.99:233,21,0	0/1:9,7:17:4.91:174,0,5	0/0:14,0:14:39.08:0,39,415	1/1:3,14:17:33.03:455,33,0	1/1:5,8:14:23.57:331,24,0	1/1:3,14:17:24.08:369,24,0	1/1:7,6:14:20.51:258,21,0	0/0:33,0:34:72.01:0,72,801	1/1:2,10:12:17.27:237,17,0	1/1:3,5:9:17.55:237,18,0	1/1:2,7:9:12.04:176,12,0	1/1:2,11:14:29.59:424,30,0	1/1:5,5:10:1.25:3,1,0	0/0:22,0:22:45.50:0,46,467	0/0:15,0:15:39.03:0,39,404	1/1:1,9:10:9.03:139,9,0	1/1:3,5:9:15.01:184,15,0	1/1:5,11:16:9.03:139,9,0	1/1:0,2:3:5.51:55,6,0
chr10	35131488	.	TCACACA	T	2883.71	PASS	AB=0.800;AC=31;AF=0.705;AN=44;BaseQRankSum=2.951;DP=413;FS=9.718;HRun=0;HaplotypeScore=92.1768;InbreedingCoeff=0.6134;MQ=69.64;MQ0=3;MQRankSum=-3.477;QD=12.43;ReadPosRankSum=-0.006;VQSLOD=1.6474;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:22:12.03:0,12,142	1/1:3,0:8:15.05:209,15,0	./.	./.	0/0:15,0:13:2.70:0,3,22	0/1:12,4:16:26.70:227,0,27	1/1:13,3:16:9.03:182,9,0	./.	0/0:14,0:14:12:0,12,219	1/1:9,3:12:8.99:141,9,0	1/1:12,6:18:12.51:237,13,0	0/0:13,0:13:9.03:0,9,206	1/1:11,5:16:15.05:303,15,0	1/1:10,1:11:3.01:61,3,0	1/1:14,10:24:24.08:484,24,0	1/1:12,0:15:9.03:126,9,0	0/0:11,0:11:11.80:0,12,322	1/1:9,0:11:8.88:125,9,0	./.	1/1:9,8:19:15.05:265,15,0	./.	1/1:7,4:11:6.02:121,6,0	1/1:8,0:10:0.88:2,1,0	1/1:12,0:17:4.43:9,4,0	1/1:8,5:13:15.52:303,16,0	0/0:9,0:9:2.97:0,3,20	1/1:9,5:14:12.04:242,12,0	./.
chr10	35132012	.	ATGTTT	A	3943.02	PASS	AB=0.984;AC=22;AF=0.393;AN=56;BaseQRankSum=10.544;DP=539;FS=65.635;HRun=0;HaplotypeScore=136.4092;InbreedingCoeff=-0.1127;MQ=77.00;MQ0=2;MQRankSum=-6.781;QD=11.98;ReadPosRankSum=8.882;VQSLOD=0.1844;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:59.80:0,60,738	0/0:11,0:11:32.94:0,33,367	0/0:24,0:18:41.37:0,41,684	0/0:26,0:20:36.51:0,37,454	0/0:24,0:24:66.69:0,67,773	0/1:17,0:17:73.30:170,0,73	0/1:20,0:20:99:160,0,119	0/1:24,0:24:99:129,0,128	0/0:22,0:22:49.92:0,50,573	0/1:28,2:30:99:380,0,143	0/1:21,0:21:27.29:264,0,27	0/0:18,0:18:39.80:0,40,384	0/1:17,0:17:45.70:242,0,46	0/1:16,0:16:55.96:192,0,56	0/1:16,2:18:31.77:223,0,32	0/1:15,0:15:58.30:186,0,58	0/0:27,0:28:74.22:0,74,871	0/1:14,1:15:48.82:199,0,49	0/1:14,0:14:68.51:116,0,69	0/1:18,0:18:99:165,0,101	0/1:14,0:14:61.22:61,0,94	1/1:16,0:16:11.84:310,12,0	0/0:11,0:11:29.93:0,30,348	0/0:17,0:17:38.89:0,39,455	1/1:12,0:13:29.75:253,30,0	0/1:20,0:20:61.82:319,0,62	1/1:31,0:31:0.85:429,1,0	1/1:10,0:10:6.70:146,7,0
chr10	35132405	.	GTGCACTATC	G	467.27	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.073;DP=822;FS=0.000;HRun=0;HaplotypeScore=216.8983;InbreedingCoeff=0.9373;MQ=82.69;MQ0=0;MQRankSum=-4.180;QD=58.41;ReadPosRankSum=0.776;VQSLOD=3.1166;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,126,5819	1/1:2,6:8:18.06:558,18,0	0/0:26,0:26:75.26:0,75,3241	0/0:19,0:19:54.19:0,54,2399	0/0:15,0:15:45.14:0,45,1980	0/0:30,0:30:87.30:0,87,4087	0/0:34,0:34:99:0,102,4620	0/0:39,0:39:99:0,111,4641	0/0:30,0:30:90.29:0,90,4115	0/0:38,0:38:99:0,111,4965	0/0:27,0:27:69.24:0,69,2881	0/0:38,0:38:99:0,111,5132	0/0:30,0:30:90.31:0,90,4253	0/0:37,0:37:99:0,108,4968	0/0:46,0:46:99:0,138,6550	0/0:27,0:27:81.28:0,81,3800	0/0:26,0:26:78.27:0,78,3732	0/0:19,0:19:51.17:0,51,2369	0/0:28,0:28:81.28:0,81,3787	0/0:23,0:23:63.20:0,63,2851	0/0:38,0:38:99:0,108,4957	0/0:35,0:35:99:0,102,4801	0/0:30,0:30:87.30:0,87,4197	0/0:43,0:43:99:0,129,6036	0/0:19,0:19:57.20:0,57,2668	0/0:40,0:40:99:0,114,5424	0/0:30,0:30:87.28:0,87,4089	0/0:3,0:3:9.03:0,9,441
chr10	35132915	.	A	AC	289.61	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-1.736;DP=654;FS=4.780;HRun=2;HaplotypeScore=85.4907;InbreedingCoeff=0.9900;MQ=81.77;MQ0=0;MQRankSum=-1.787;QD=32.18;ReadPosRankSum=-0.405;VQSLOD=3.1624;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:90.23:0,90,1186	1/1:1,8:9:24.08:383,24,0	0/0:20,0:20:49.81:0,50,734	0/0:14,0:14:42.08:0,42,547	0/0:30,0:30:90.29:0,90,1234	0/0:26,0:26:75.24:0,75,1031	0/0:30,0:30:87.29:0,87,1215	0/0:31,0:30:90.23:0,90,1152	0/0:22,0:22:66.21:0,66,903	0/0:28,0:28:81.27:0,81,1129	0/0:21,0:21:60.18:0,60,800	0/0:24,0:24:72.23:0,72,990	0/0:27,0:27:78.26:0,78,1090	0/0:23,0:23:66.18:0,66,867	0/0:22,0:22:66.21:0,66,906	0/0:27,0:27:78.26:0,78,1088	0/0:21,0:21:63.21:0,63,880	0/0:32,0:32:93.26:0,93,1243	0/0:21,0:21:60.19:0,60,823	0/0:25,0:25:74.84:0,75,1016	0/0:23,0:23:69.23:0,69,964	0/0:23,0:23:69.21:0,69,946	0/0:33,0:33:99:0,99,1363	0/0:23,0:23:66.22:0,66,922	0/0:20,0:20:57.16:0,57,761	0/0:25,0:24:72.23:0,72,989	0/0:18,0:18:54.17:0,54,735	0/0:6,0:6:18.06:0,18,246
chr10	35132971	.	AT	A	572.23	PASS	AB=0.866;AC=6;AF=0.107;AN=56;BaseQRankSum=7.072;DP=604;FS=2.760;HRun=11;HaplotypeScore=63.7847;InbreedingCoeff=0.5949;MQ=72.23;MQ0=0;MQRankSum=-0.331;QD=8.29;ReadPosRankSum=1.393;VQSLOD=2.4376;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,19:23:52.97:425,53,0	1/1:2,9:12:31.99:252,32,0	0/0:16,0:15:15.27:0,15,235	0/0:16,0:14:20.41:0,20,194	0/0:32,0:33:87.04:0,87,902	0/0:20,0:22:62.82:0,63,630	0/0:27,0:27:60.14:0,60,633	0/0:38,0:38:85.71:0,86,870	0/0:18,1:19:20.43:0,20,411	0/1:24,4:28:20.05:20,0,578	0/0:18,1:19:20.43:0,20,411	0/0:16,0:16:43.89:0,44,440	0/0:18,0:18:48.08:0,48,499	0/0:21,0:21:56.17:0,56,575	0/0:25,0:26:72.01:0,72,744	0/0:21,0:21:51.12:0,51,537	0/0:27,0:27:61.78:0,62,702	0/0:27,0:27:71.52:0,72,725	0/0:15,1:16:5.43:0,5,263	0/0:19,1:20:11.08:0,11,426	0/0:18,1:19:23.33:0,23,430	0/0:18,0:18:44.98:0,45,462	0/0:27,0:27:50.62:0,51,717	0/0:21,0:21:60.15:0,60,639	0/0:17,0:17:39.10:0,39,416	0/0:25,0:24:54.14:0,54,576	0/0:25,1:26:44.31:0,44,652	0/1:5,1:6:9.63:10,0,104
chr10	35134778	.	A	AT	1989.93	PASS	AB=1.000;AC=37;AF=0.661;AN=56;BaseQRankSum=-3.546;DP=277;FS=8.927;HRun=2;HaplotypeScore=35.5253;InbreedingCoeff=0.7254;MQ=57.97;MQ0=6;MQRankSum=-1.495;QD=10.70;ReadPosRankSum=1.206;VQSLOD=0.8878;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:44.62:0,45,356	0/0:1,0:1:2.94:0,3,18	0/1:7,0:3:0.38:0,0,0	0/1:7,0:5:2.64:3,0,31	0/0:13,0:13:4.74:0,5,161	1/1:7,0:6:8.46:56,8,0	1/1:4,2:6:14.28:114,14,0	1/1:16,0:16:38.30:247,38,0	0/0:9,0:9:11.95:0,12,114	1/1:11,0:9:25.54:143,26,0	1/1:12,0:11:27.86:167,28,0	0/0:6,0:6:5.95:0,6,46	1/1:9,0:8:14.50:94,14,0	1/1:12,0:12:24.79:137,25,0	1/1:6,0:6:13.72:70,14,0	1/1:2,3:5:8.20:59,8,0	0/0:21,0:21:33:0,33,292	1/1:13,0:13:21.23:94,21,0	1/1:8,0:8:20.59:147,21,0	1/1:5,0:5:13.92:82,14,0	0/1:5,0:5:19.96:35,0,20	1/1:6,0:4:10.76:50,11,0	0/0:6,0:6:11.79:0,12,80	0/0:13,0:12:21:0,21,201	1/1:15,1:14:38.88:232,39,0	1/1:11,0:10:28.73:202,29,0	1/1:10,1:11:27.85:181,28,0	1/1:10,0:9:16.58:69,17,0
chr10	35135298	.	AG	A	514.89	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.667;DP=430;FS=24.898;HRun=2;HaplotypeScore=50.2855;InbreedingCoeff=0.8148;MQ=89.04;MQ0=0;MQRankSum=-1.462;QD=16.09;ReadPosRankSum=1.709;VQSLOD=2.0969;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,27:32:48.15:610,48,0	0/0:7,0:7:21:0,21,247	0/0:23,0:22:48.64:0,49,571	0/0:24,0:22:38.32:0,38,530	0/0:13,0:13:32.63:0,33,398	0/0:13,0:13:27.05:0,27,345	0/0:30,0:30:84.01:0,84,1072	0/0:19,0:19:45.01:0,45,548	0/0:16,0:16:45.04:0,45,581	0/0:13,0:13:23.07:0,23,248	0/0:16,0:16:33.04:0,33,404	0/0:13,0:13:33.04:0,33,408	0/0:10,0:10:26.98:0,27,310	0/0:13,0:13:30.06:0,30,389	0/0:16,0:16:39.09:0,39,525	0/0:14,0:14:36.08:0,36,479	0/0:21,0:21:59.98:0,60,779	0/0:16,0:16:48.04:0,48,609	0/0:12,0:12:22.14:0,22,317	0/0:8,0:8:14.97:0,15,176	0/0:25,0:25:62.83:0,63,817	0/0:8,0:8:21.06:0,21,293	0/0:11,0:11:14.98:0,15,197	0/0:17,0:17:48.07:0,48,630	0/0:12,0:12:32.93:0,33,373	0/0:16,0:16:33.08:0,33,435	0/0:11,0:11:27.07:0,27,366	0/0:1,0:1:2.99:0,3,24
chr10	35135464	.	G	GA	11729.22	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-14.745;DP=631;FS=6.985;HRun=8;HaplotypeScore=53.2343;InbreedingCoeff=0.9924;MQ=76.17;MQ0=0;MQRankSum=0.029;QD=28.40;ReadPosRankSum=0.786;VQSLOD=5.1884;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:39,1:40:76.44:0,76,943	0/0:11,0:11:27.01:0,27,247	0/0:17,0:16:13.05:0,13,248	0/0:11,0:11:18:0,18,163	0/0:45,0:45:99:0,120,1098	1/1:0,16:16:48.14:554,48,0	1/1:6,21:27:32.88:628,33,0	1/1:3,22:25:66.18:748,66,0	0/0:21,0:21:60.01:0,60,544	1/1:5,25:30:75.17:827,75,0	1/1:0,21:21:53.99:602,54,0	0/0:15,0:15:42.02:0,42,384	1/1:1,18:19:53.92:622,54,0	1/1:2,14:16:30.09:346,30,0	1/1:3,32:35:78.23:900,78,0	1/1:1,24:25:57.17:658,57,0	0/0:21,0:21:57.02:0,57,522	1/1:1,12:13:36.11:415,36,0	1/1:3,23:26:69.18:776,69,0	1/1:2,36:38:80.73:1135,81,0	1/1:1,18:19:45.13:519,45,0	1/1:0,16:16:45.13:519,45,0	0/0:26,0:26:66.01:0,66,599	0/0:11,0:11:30.01:0,30,271	1/1:0,26:26:60.18:692,60,0	1/1:4,21:25:63.17:713,63,0	1/1:3,27:29:78.23:899,78,0	1/1:0,6:6:15.04:173,15,0
chr10	35140581	.	C	CT	366.82	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=-3.101;DP=589;FS=1.913;HRun=8;HaplotypeScore=55.1522;InbreedingCoeff=0.6417;MQ=78.48;MQ0=0;MQRankSum=0.225;QD=12.65;ReadPosRankSum=-1.333;VQSLOD=2.5512;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:76.35:0,76,856	1/1:0,14:14:39.12:450,39,0	0/0:14,0:14:20.96:0,21,179	0/1:15,0:15:22.51:23,0,139	0/0:28,0:28:72.03:0,72,659	0/0:27,0:27:69.02:0,69,631	0/0:12,0:12:27.01:0,27,247	0/0:34,0:34:62.23:0,62,708	0/0:18,0:18:44.30:0,44,428	0/0:29,0:29:81.03:0,81,739	0/0:22,0:22:60.03:0,60,549	0/0:23,0:23:63.03:0,63,577	0/0:31,0:31:78.03:0,78,714	0/0:12,0:12:29.96:0,30,259	0/0:13,0:13:32.99:0,33,297	0/0:14,0:14:42.02:0,42,384	0/0:11,0:11:30.01:0,30,274	0/0:30,0:30:67.70:0,68,675	0/0:21,0:21:48.01:0,48,436	0/0:21,0:21:57.02:0,57,517	0/0:12,0:12:27.01:0,27,247	0/0:20,0:20:60.03:0,60,549	0/0:26,0:26:74.95:0,75,681	0/0:12,0:12:33.02:0,33,302	0/0:26,0:26:63.02:0,63,577	0/0:31,0:31:75.03:0,75,686	0/0:33,0:33:86.90:0,87,779	0/0:6,0:6:18.01:0,18,165
chr10	35141839	.	GT	G	452.54	PASS	AB=0.844;AC=12;AF=0.214;AN=56;BaseQRankSum=-7.180;DP=527;FS=1.254;HRun=16;HaplotypeScore=82.1827;InbreedingCoeff=0.4368;MQ=71.27;MQ0=4;MQRankSum=3.931;QD=3.02;ReadPosRankSum=2.920;VQSLOD=0.0259;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:32:34.60:0,35,202	0/0:4,0:4:6.31:0,6,24	0/0:40,0:19:11.17:0,11,72	0/1:37,0:14:0.69:2,0,1	1/1:17,13:32:2.45:199,2,0	0/0:4,0:22:5.82:0,6,36	0/0:5,0:19:11.57:0,12,67	0/0:21,0:19:14.62:0,15,81	1/1:7,5:12:11.63:72,12,0	0/0:21,0:20:18.19:0,18,83	0/0:1,0:13:14.60:0,15,69	1/1:10,3:14:15.40:82,15,0	0/0:5,0:15:2.80:0,3,13	0/0:18,0:17:5.44:0,5,23	0/0:21,0:20:19.61:0,20,150	0/0:14,0:14:23.35:0,23,139	0/1:10,9:18:18.96:118,0,19	0/0:8,0:8:7.42:0,7,31	0/0:7,0:26:30.09:0,30,144	0/0:23,0:23:37.80:0,38,211	0/1:10,0:10:2.75:3,0,27	0/0:2,0:13:8.64:0,9,29	1/1:4,3:9:8.17:33,8,0	0/1:9,7:16:64.53:93,0,65	0/0:3,0:17:2.84:0,3,14	0/0:19,0:20:31.44:0,31,165	0/0:22,0:21:27.70:0,28,155	0/0:8,0:8:2.96:0,3,19
chr10	35141974	.	T	TA	1389.85	PASS	AB=0.778;AC=32;AF=0.571;AN=56;BaseQRankSum=-3.066;DP=471;FS=0.000;HRun=16;HaplotypeScore=78.7274;InbreedingCoeff=-0.0538;MQ=79.66;MQ0=3;MQRankSum=1.754;QD=3.82;ReadPosRankSum=0.764;VQSLOD=0.6322;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:10,1:12:5.36:5,0,60	0/1:5,4:9:31.39:54,0,31	0/1:42,0:23:7.38:7,0,69	0/0:45,1:26:18.14:0,18,82	0/1:17,1:18:0.85:1,0,91	0/1:8,12:21:28.28:167,0,28	1/1:2,2:6:5.83:38,6,0	0/1:9,1:15:23.27:23,0,31	0/0:15,0:17:26.12:0,26,133	0/1:12,8:20:12.57:99,0,13	0/1:5,9:14:15.43:78,0,15	0/0:11,0:15:12.44:0,12,60	1/1:7,6:14:11.82:86,12,0	1/1:2,4:7:14.80:107,15,0	0/1:9,13:22:26.40:88,0,26	1/1:6,10:17:11.82:86,12,0	0/0:18,1:21:4.48:0,4,99	1/1:9,5:15:5.96:138,6,0	0/1:8,6:13:12.59:94,0,13	1/1:13,9:22:6.64:123,7,0	1/1:6,3:9:5.73:34,6,0	0/1:9,3:12:17.40:55,0,17	0/1:16,0:16:8.34:8,0,44	0/0:5,0:8:10.38:0,10,55	1/1:6,4:15:11.05:102,11,0	0/1:13,6:19:33.11:110,0,33	0/1:8,4:12:31.19:31,0,47	1/1:6,3:9:2.99:24,3,0
chr10	35142247	.	C	CA	6655.19	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-14.423;DP=757;FS=6.362;HRun=1;HaplotypeScore=71.5559;InbreedingCoeff=0.9979;MQ=86.04;MQ0=0;MQRankSum=-6.740;QD=39.61;ReadPosRankSum=2.671;VQSLOD=5.5722;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,108,1386	0/0:9,0:9:24.08:0,24,311	0/0:23,0:23:66.19:0,66,806	0/0:25,0:25:69.21:0,69,847	1/1:0,28:28:78.26:1169,78,0	0/0:29,0:29:87.15:0,87,1106	0/0:30,0:30:90.29:0,90,1169	0/0:30,0:30:81.26:0,81,1052	1/1:2,36:38:96.33:1439,96,0	0/0:31,0:31:84.27:0,84,1080	0/0:27,0:27:78.24:0,78,997	1/1:1,30:31:84.28:1259,84,0	0/0:20,0:20:60.17:0,60,750	0/0:37,0:37:99:0,105,1346	0/0:45,0:45:99:0,132,1714	0/0:26,0:26:78.24:0,78,998	1/1:1,19:20:51.17:765,51,0	0/0:14,0:14:42.14:0,42,545	0/0:13,0:13:33.11:0,33,429	0/0:38,0:38:99:0,102,1310	0/0:34,0:34:99:0,99,1256	0/0:31,0:31:87.28:0,87,1130	1/1:0,27:27:69.05:1034,69,0	1/1:0,24:24:66.22:989,66,0	0/0:23,0:23:63.20:0,63,818	0/0:22,0:22:60.19:0,60,779	0/0:38,0:37:99:0,114,1465	0/0:6,0:6:18.06:0,18,234
chr10	35143036	.	C	CTT	36256.70	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-10.400;DP=858;FS=7.356;HRun=2;HaplotypeScore=94.5741;InbreedingCoeff=0.9996;MQ=95.37;MQ0=3;MQRankSum=-10.438;QD=49.53;ReadPosRankSum=3.774;VQSLOD=4.2008;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,132,1942	1/1:0,14:15:45.15:838,45,0	0/0:39,0:39:99:0,106,1520	0/0:40,0:40:88.72:0,89,1359	1/1:2,23:25:66.14:1148,66,0	1/1:1,30:31:81.28:1514,81,0	1/1:1,22:23:54.19:1012,54,0	1/1:4,38:44:99:2230,126,0	1/1:1,27:29:78.27:1461,78,0	1/1:0,32:32:96.30:1720,96,0	1/1:2,28:30:81.15:1409,81,0	1/1:1,27:28:78.27:1429,78,0	1/1:1,35:36:99:1910,102,0	1/1:1,32:35:93.32:1742,93,0	1/1:3,42:46:99:2045,111,0	1/1:1,42:43:99:2136,114,0	1/1:0,30:31:81.28:1518,81,0	1/1:1,13:14:42.14:770,42,0	1/1:4,18:22:63.22:1166,63,0	1/1:0,38:38:99:2047,114,0	1/1:1,36:37:93.32:1741,93,0	1/1:2,36:38:99:1766,102,0	1/1:1,19:20:54.19:1012,54,0	1/1:0,23:23:66.23:1237,66,0	1/1:2,23:24:60.21:1124,60,0	1/1:0,30:30:90.31:1679,90,0	1/1:2,22:24:60.20:1098,60,0	1/1:2,9:11:27.09:506,27,0
chr10	35144318	.	CA	C	245.32	PASS	AB=0.895;AC=9;AF=0.161;AN=56;BaseQRankSum=2.394;DP=545;FS=6.053;HRun=16;HaplotypeScore=83.7512;InbreedingCoeff=0.1380;MQ=75.01;MQ0=3;MQRankSum=-0.038;QD=1.82;ReadPosRankSum=2.556;VQSLOD=-0.6346;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:8,16:25:28.37:266,28,0	0/1:3,1:9:4.79:34,0,5	0/0:25,0:19:14.98:0,15,98	0/0:26,0:15:4.35:0,4,18	0/0:10,0:25:26.59:0,27,156	0/0:20,2:24:10.15:0,10,321	0/0:14,0:15:17.14:0,17,169	0/0:31,1:32:10.21:0,10,292	0/0:16,0:19:45.19:0,45,252	0/0:18,0:22:10.18:0,10,143	0/0:18,0:21:17.07:0,17,257	0/0:4,0:15:8.51:0,9,43	0/0:25,2:27:31.08:0,31,310	0/0:17,0:17:39.40:0,39,304	0/1:14,0:16:9.54:10,0,158	0/1:18,3:22:43.43:43,0,116	0/0:8,0:21:25.58:0,26,140	0/0:14,1:15:23.87:0,24,294	0/1:18,1:20:4.37:4,0,203	0/1:17,1:18:0.08:0,0,170	0/0:6,0:6:11.73:0,12,87	0/0:10,0:13:11.45:0,11,105	0/0:14,0:14:25.61:0,26,149	0/0:2,0:12:0.40:0,0,10	0/0:26,0:26:37.09:0,37,385	0/1:17,1:18:0.09:0,0,98	0/0:32,0:34:60.97:0,61,450	0/1:7,0:7:14.99:15,0,83
chr10	35144717	.	TAA	T	1755.18	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=-3.956;DP=461;FS=1.656;HRun=12;HaplotypeScore=73.6451;InbreedingCoeff=0.8341;MQ=70.15;MQ0=2;MQRankSum=0.904;QD=18.87;ReadPosRankSum=5.593;VQSLOD=2.9261;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:72.23:0,72,1050	0/0:6,0:6:5.85:0,6,17	0/1:9,0:7:18.99:19,0,44	0/0:13,0:10:2.47:0,2,71	1/1:2,16:18:36:366,36,0	0/0:18,0:18:45.15:0,45,659	0/0:16,0:17:50.66:0,51,723	0/0:24,0:25:41.61:0,42,552	1/1:3,12:15:36.08:366,36,0	0/0:15,0:16:30.09:0,30,403	0/0:19,0:20:51.16:0,51,725	1/1:1,12:13:33.07:336,33,0	0/0:17,0:20:50.14:0,50,669	0/0:24,0:24:60.19:0,60,873	0/0:10,0:10:27.08:0,27,383	0/0:26,0:27:71.73:0,72,1030	1/1:2,17:19:42.09:427,42,0	0/0:13,0:13:39.10:0,39,552	0/0:20,0:21:56.60:0,57,737	0/0:19,0:19:45.11:0,45,606	0/0:8,0:8:18.51:0,19,234	0/0:6,0:6:18.02:0,18,208	1/1:2,3:5:9:91,9,0	1/1:2,12:14:33.04:336,33,0	0/0:11,0:11:30.10:0,30,427	0/0:27,0:27:60.18:0,60,833	0/0:26,0:26:72.20:0,72,1025	0/0:13,0:13:36.12:0,36,534
chr10	35144729	.	ACT	A	82.35	PASS	AB=0.909;AC=3;AF=0.054;AN=56;BaseQRankSum=0.216;DP=448;FS=3.112;HRun=0;HaplotypeScore=83.9257;InbreedingCoeff=0.6236;MQ=74.57;MQ0=2;MQRankSum=1.974;QD=5.88;ReadPosRankSum=-1.293;VQSLOD=2.9473;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:72.18:0,72,1161	1/1:0,4:4:12:167,12,0	0/1:9,0:8:10.30:10,0,137	0/0:14,0:12:18.73:0,19,317	0/0:18,0:18:45.63:0,46,284	0/0:15,0:15:45.15:0,45,765	0/0:22,0:22:60.09:0,60,955	0/0:15,0:15:42.13:0,42,668	0/0:13,0:13:35.72:0,36,241	0/0:12,0:12:33.07:0,33,529	0/0:17,0:17:42.06:0,42,695	0/0:14,0:14:37.37:0,37,292	0/0:20,0:20:57.06:0,57,882	0/0:23,0:23:66.16:0,66,1069	0/0:20,0:20:60.20:0,60,968	0/0:27,0:27:81.28:0,81,1373	0/0:19,0:19:46.46:0,46,329	0/0:15,0:15:45.11:0,45,739	0/0:22,0:22:64.94:0,65,955	0/0:14,0:14:39.12:0,39,647	0/0:7,0:7:17.87:0,18,286	0/0:5,0:5:15.05:0,15,254	0/0:9,0:9:25.04:0,25,244	0/0:12,0:12:25.09:0,25,177	0/0:10,0:10:27.06:0,27,428	0/0:23,0:23:63.18:0,63,1041	0/0:28,0:28:84.27:0,84,1379	0/0:13,0:13:36.12:0,36,620
chr10	35145025	.	TA	T	220.96	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.649;DP=569;FS=4.828;HRun=4;HaplotypeScore=96.8787;InbreedingCoeff=0.8487;MQ=75.64;MQ0=0;MQRankSum=-0.092;QD=24.55;ReadPosRankSum=-0.983;VQSLOD=2.1131;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:96.30:0,96,1307	1/1:0,9:9:27.08:315,27,0	0/0:15,0:15:42.13:0,42,553	0/0:11,0:11:20.41:0,20,303	0/0:29,0:29:81.18:0,81,1088	0/0:25,0:25:74.96:0,75,979	0/0:13,0:13:36.11:0,36,474	0/0:26,0:26:75.24:0,75,1014	0/0:22,0:22:66.15:0,66,880	0/0:27,0:27:78.22:0,78,1047	0/0:36,0:36:99:0,108,1422	0/0:23,0:23:69.22:0,69,927	0/0:20,0:20:60.09:0,60,799	0/0:12,0:12:33:0,33,426	0/0:23,0:23:69.12:0,69,920	0/0:23,0:23:69.22:0,69,934	0/0:28,0:28:78.19:0,78,1032	0/0:17,0:17:42.14:0,42,578	0/0:20,0:20:60.09:0,60,792	0/0:24,0:24:72.24:0,72,988	0/0:3,0:3:9.03:0,9,124	0/0:20,0:20:60.20:0,60,820	0/0:27,0:27:81.23:0,81,1079	0/0:6,0:6:18.05:0,18,230	0/0:23,0:23:63.20:0,63,851	0/0:24,0:24:69.23:0,69,938	0/0:26,0:26:75.14:0,75,1003	0/0:2,0:2:6.02:0,6,80
chr10	35146035	.	GA	G	4122.16	PASS	AB=0.706;AC=45;AF=0.804;AN=56;BaseQRankSum=1.079;DP=448;FS=0.000;HRun=13;HaplotypeScore=81.3158;InbreedingCoeff=-0.1040;MQ=46.48;MQ0=21;MQRankSum=-3.082;QD=9.35;ReadPosRankSum=1.911;VQSLOD=3.0586;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,13:15:30.91:208,31,0	1/1:3,1:8:13.13:51,13,0	0/1:8,1:5:16.13:16,0,42	0/0:5,2:4:2.51:0,3,6	1/1:11,9:21:11.60:234,12,0	1/1:3,12:16:8.66:213,9,0	0/1:10,8:17:76.80:122,0,77	1/1:18,9:27:19.23:210,19,0	1/1:6,8:13:7.78:204,8,0	1/1:13,10:23:35.66:262,36,0	1/1:6,14:22:10.58:223,11,0	0/1:7,5:12:7.55:73,0,8	1/1:6,10:15:23.76:174,24,0	1/1:10,6:18:30.66:197,31,0	1/1:5,9:13:11.58:216,12,0	1/1:11,7:18:28.81:200,29,0	0/1:5,6:10:16.15:108,0,16	1/1:7,6:11:20.83:151,21,0	0/1:7,5:10:10.26:60,0,10	0/1:14,10:24:45.71:185,0,46	0/1:2,1:3:8.39:16,0,8	1/1:4,8:11:17.86:131,18,0	0/1:13,12:26:6.66:238,0,7	1/1:6,7:13:17.63:131,18,0	1/1:8,8:15:5.63:193,6,0	0/1:8,6:14:8.42:107,0,8	1/1:18,9:27:15.32:182,15,0	1/1:5,0:5:2.90:18,3,0
chr10	35146053	.	CA	C	8676.62	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-2.225;DP=499;FS=12.321;HRun=9;HaplotypeScore=77.0455;InbreedingCoeff=0.9547;MQ=57.09;MQ0=10;MQRankSum=-2.218;QD=19.50;ReadPosRankSum=1.662;VQSLOD=4.6667;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:20:44.32:0,44,505	1/1:4,10:13:27.01:247,27,0	0/0:19,1:13:31.32:0,31,291	0/0:12,0:9:16.42:0,16,144	1/1:6,24:30:34.40:569,34,0	1/1:4,14:18:42.02:384,42,0	1/1:3,14:16:36.02:329,36,0	1/1:8,19:27:47.58:439,48,0	1/1:2,12:13:33.02:302,33,0	1/1:4,22:26:66.01:600,66,0	1/1:7,19:26:48.01:439,48,0	1/1:4,7:11:15:137,15,0	1/1:4,13:17:39.02:357,39,0	1/1:3,19:22:45.02:411,45,0	1/1:3,14:16:36.02:329,36,0	1/1:2,15:16:39.02:356,39,0	1/1:3,12:14:30.01:274,30,0	1/1:5,7:10:21:191,21,0	1/1:4,13:16:36:329,36,0	1/1:11,21:31:62.97:568,63,0	1/1:2,2:4:9:82,9,0	1/1:5,9:14:24.01:220,24,0	1/1:5,17:22:48.02:439,48,0	1/1:1,9:10:20.78:192,21,0	1/1:1,21:21:63.03:576,63,0	1/1:4,12:16:36.01:329,36,0	1/1:2,18:20:51.02:466,51,0	1/1:0,5:5:12.01:110,12,0
chr10	35147214	.	A	AT	6203.33	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-13.848;DP=643;FS=0.000;HRun=1;HaplotypeScore=59.7127;InbreedingCoeff=0.9996;MQ=82.14;MQ0=0;MQRankSum=-1.649;QD=41.36;ReadPosRankSum=1.822;VQSLOD=5.3115;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:69.03:0,69,854	0/0:12,0:12:36.12:0,36,467	0/0:20,0:20:57.18:0,57,733	0/0:14,0:14:31.30:0,31,380	1/1:0,40:40:99:1798,120,0	0/0:16,0:16:28.17:0,28,564	0/0:21,0:21:60.19:0,60,779	0/0:32,0:32:93.30:0,93,1196	1/1:1,20:21:57.19:853,57,0	0/0:24,0:24:72.23:0,72,935	0/0:27,0:27:78.25:0,78,1012	1/1:2,17:19:51.17:764,51,0	0/0:26,0:26:78.23:0,78,995	0/0:24,0:24:72.21:0,72,907	0/0:24,0:24:72.22:0,72,921	0/0:19,0:19:57.19:0,57,740	1/1:1,23:24:60.20:899,60,0	0/0:15,0:15:34.31:0,34,535	0/0:23,0:23:63.19:0,63,803	0/0:34,0:34:99:0,102,1310	0/0:15,0:15:45.15:0,45,584	0/0:19,0:19:54.18:0,54,701	1/1:0,32:32:84.28:1259,84,0	1/1:0,14:14:42.14:629,42,0	0/0:32,0:32:96.30:0,96,1233	0/0:31,0:31:87.27:0,87,1117	0/0:29,0:29:87.28:0,87,1129	0/0:11,0:11:33.09:0,33,413
chr10	35148022	.	CTAGG	C	269.05	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.558;DP=578;FS=13.984;HRun=0;HaplotypeScore=98.6393;InbreedingCoeff=0.9892;MQ=84.51;MQ0=0;MQRankSum=-3.323;QD=29.89;ReadPosRankSum=0.515;VQSLOD=2.5024;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:42.14:0,42,1138	1/1:0,9:9:18.06:360,18,0	0/0:16,0:16:45.15:0,45,1214	0/0:22,0:22:60.20:0,60,1552	0/0:25,0:25:75.26:0,75,2098	0/0:22,0:22:66.23:0,66,1847	0/0:16,0:16:48.16:0,48,1343	0/0:35,0:35:99:0,105,2865	0/0:23,0:23:69.24:0,69,1916	0/0:29,0:29:87.30:0,87,2352	0/0:20,0:20:60.21:0,60,1679	0/0:18,0:18:54.19:0,54,1510	0/0:29,0:29:87.30:0,87,2387	0/0:20,0:20:60.21:0,60,1666	0/0:32,0:32:93.32:0,93,2603	0/0:21,0:21:63.22:0,63,1753	0/0:16,0:16:45.15:0,45,1249	0/0:10,0:10:27.09:0,27,755	0/0:24,0:24:66.23:0,66,1747	0/0:24,0:24:72.23:0,72,1906	0/0:28,0:28:84.27:0,84,2231	0/0:9,0:9:27.09:0,27,756	0/0:19,0:19:57.18:0,57,1535	0/0:12,0:12:36.11:0,36,947	0/0:13,0:13:39.13:0,39,1092	0/0:30,0:30:90.31:0,90,2456	0/0:29,0:29:87.30:0,87,2423	0/0:12,0:12:30.10:0,30,839
chr10	35148685	.	A	AC	380.40	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-3.446;DP=674;FS=9.018;HRun=2;HaplotypeScore=76.8957;InbreedingCoeff=0.9988;MQ=75.92;MQ0=0;MQRankSum=-1.011;QD=29.26;ReadPosRankSum=1.671;VQSLOD=2.4568;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:57.15:0,57,690	1/1:0,13:13:33.11:475,33,0	0/0:13,0:14:39.11:0,39,471	0/0:11,0:11:29.80:0,30,326	0/0:30,0:30:87.24:0,87,1052	0/0:27,0:27:81.25:0,81,1004	0/0:14,0:14:42.13:0,42,520	0/0:42,0:42:99:0,123,1507	0/0:19,0:19:57.16:0,57,693	0/0:38,0:37:99:0,108,1339	0/0:16,0:16:48.15:0,48,595	0/0:31,0:31:90.28:0,90,1115	0/0:31,0:31:90.26:0,90,1097	0/0:21,0:21:63.19:0,63,769	0/0:35,0:35:99:0,105,1301	0/0:24,0:24:69.20:0,69,841	0/0:15,0:15:45.06:0,45,525	0/0:19,0:19:54.17:0,54,667	0/0:19,0:19:54.17:0,54,669	0/0:30,0:30:90.27:0,90,1102	0/0:24,0:24:69.22:0,69,855	0/0:24,0:24:72.19:0,72,855	0/0:31,0:31:87.26:0,87,1064	0/0:19,0:19:57.18:0,57,706	0/0:29,0:29:87.26:0,87,1066	0/0:36,0:36:99:0,108,1326	0/0:29,0:29:84.26:0,84,1041	0/0:11,0:11:33.10:0,33,409
chr10	35152771	.	GT	G	10714.97	PASS	AB=0.744;AC=54;AF=0.964;AN=56;BaseQRankSum=-3.842;DP=324;FS=22.585;HRun=2;HaplotypeScore=65.2652;InbreedingCoeff=-0.0283;MQ=60.37;MQ0=0;MQRankSum=-4.458;QD=33.07;ReadPosRankSum=2.886;VQSLOD=3.0751;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,8:8:18.06:233,18,0	1/1:0,6:6:15.05:195,15,0	0/1:6,5:11:99:121,0,106	0/1:6,2:8:17.36:17,0,72	1/1:1,21:22:54.17:700,54,0	1/1:0,15:15:33.11:428,33,0	1/1:0,12:12:30.10:389,30,0	1/1:1,26:27:78.24:997,78,0	1/1:1,13:14:27.09:350,27,0	1/1:0,7:7:21.07:272,21,0	1/1:0,18:18:51.17:661,51,0	1/1:0,8:8:21.07:272,21,0	1/1:0,16:16:48.16:622,48,0	1/1:0,14:14:36.12:467,36,0	1/1:0,17:17:48.16:623,48,0	1/1:0,7:7:18.06:233,18,0	1/1:1,12:13:33.11:428,33,0	1/1:0,7:7:21.07:272,21,0	1/1:0,9:9:27.08:337,27,0	1/1:0,13:13:39.13:506,39,0	1/1:0,7:7:18.06:233,18,0	1/1:0,2:2:6.02:78,6,0	1/1:0,6:6:15.05:194,15,0	1/1:0,6:6:18.06:233,18,0	1/1:0,13:13:39.13:506,39,0	1/1:0,11:11:33.09:414,33,0	1/1:0,17:17:42.14:543,42,0	1/1:0,10:10:30.10:389,30,0
chr10	35153004	.	CTT	C	11113.02	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=7.256;DP=361;FS=11.682;HRun=2;HaplotypeScore=45.9177;InbreedingCoeff=0.9624;MQ=67.45;MQ0=0;MQRankSum=0.496;QD=44.10;ReadPosRankSum=2.327;VQSLOD=3.4097;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:57.20:0,57,1158	0/0:5,0:5:15.02:0,15,257	0/0:8,0:8:24.08:0,24,473	0/0:7,0:6:14.25:0,14,180	0/0:24,0:24:69.20:0,69,1351	1/1:0,23:23:57.19:930,57,0	1/1:0,5:5:12.04:196,12,0	1/1:0,28:28:84.27:1343,84,0	0/0:12,0:12:36.12:0,36,708	1/1:0,9:9:27.09:436,27,0	1/1:0,15:15:39.13:633,39,0	0/0:6,0:6:18.06:0,18,366	1/1:0,10:10:24.08:392,24,0	1/1:0,17:17:39.13:636,39,0	1/1:0,11:11:30.10:490,30,0	1/1:0,9:9:24.08:392,24,0	0/0:19,0:19:51.16:0,51,994	1/1:0,15:15:42.14:685,42,0	1/1:0,15:15:45.15:734,45,0	1/1:0,13:13:33.11:538,33,0	1/1:0,11:11:33.11:538,33,0	1/1:0,2:2:6.02:98,6,0	0/0:6,0:6:18.03:0,18,321	0/0:3,0:3:9.03:0,9,173	1/1:0,18:18:45.15:733,45,0	1/1:0,20:20:60.20:971,60,0	1/1:0,19:19:51.17:831,51,0	1/1:0,12:12:33.11:538,33,0
chr10	35153120	.	T	TA	203.97	PASS	AB=0.955;AC=4;AF=0.071;AN=56;BaseQRankSum=-2.693;DP=384;FS=0.000;HRun=7;HaplotypeScore=35.1751;InbreedingCoeff=0.3743;MQ=64.14;MQ0=1;MQRankSum=-0.604;QD=7.03;ReadPosRankSum=0.051;VQSLOD=-0.6405;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:66.08:0,66,630	1/1:0,8:8:24.07:290,24,0	0/1:11,0:5:14.23:14,0,47	0/0:8,0:4:0.62:0,1,15	0/0:26,0:26:72.12:0,72,695	0/0:20,0:20:54.08:0,54,521	0/0:7,0:7:18.02:0,18,174	0/0:30,0:30:75.04:0,75,693	0/0:7,0:7:21.02:0,21,197	0/0:21,0:21:51.08:0,51,493	0/0:15,0:15:42.07:0,42,405	0/0:8,0:8:24.03:0,24,226	0/0:11,0:11:27.01:0,27,248	0/0:8,0:8:24.02:0,24,226	0/0:6,0:6:18.03:0,18,174	0/0:11,0:11:30.05:0,30,290	0/0:24,0:24:66.08:0,66,630	0/0:17,0:17:51.08:0,51,492	0/0:14,0:14:42.05:0,42,399	0/0:18,0:18:42.05:0,42,400	0/0:9,0:9:24.04:0,24,232	0/0:1,0:1:3:0,3,29	0/1:9,1:10:9.20:9,0,204	0/0:7,0:7:18.03:0,18,174	0/0:14,0:14:36.05:0,36,348	0/0:18,0:18:42.06:0,42,406	0/0:18,0:18:48.07:0,48,464	0/0:13,0:13:36.05:0,36,346
chr10	35153869	.	CT	C	7178.44	PASS	AB=0.561;AC=37;AF=0.661;AN=56;BaseQRankSum=8.817;DP=529;FS=3.407;HRun=11;HaplotypeScore=54.2736;InbreedingCoeff=0.8702;MQ=76.79;MQ0=0;MQRankSum=-1.336;QD=19.19;ReadPosRankSum=1.294;VQSLOD=6.0186;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:75.16:0,75,788	1/1:1,6:7:14.98:123,15,0	0/0:19,0:17:24.43:0,24,224	0/0:9,1:9:0.03:0,0,44	0/0:33,0:33:84.19:0,84,876	1/1:1,21:22:59.92:493,60,0	1/1:2,14:16:38.95:320,39,0	1/1:6,22:28:54.78:524,55,0	0/0:10,0:10:30.04:0,30,308	1/1:4,18:22:53.61:421,54,0	1/1:1,24:26:67.84:539,68,0	0/0:16,0:16:42.10:0,42,441	1/1:1,15:16:35.96:296,36,0	0/1:5,18:23:18.62:275,0,19	1/1:3,17:20:41.95:345,42,0	1/1:0,18:19:46.99:375,47,0	0/0:18,0:18:47.93:0,48,447	1/1:1,16:17:41.64:344,42,0	1/1:0,14:15:44.90:361,45,0	1/1:5,19:24:53.82:435,54,0	1/1:2,9:11:23.95:197,24,0	1/1:1,19:21:52.84:410,53,0	0/0:16,2:18:23.45:0,23,440	0/0:3,0:6:11.86:0,12,110	1/1:4,24:28:62.92:517,63,0	1/1:3,21:24:62.89:513,63,0	1/1:3,25:28:65.90:542,66,0	1/1:0,7:7:17.98:148,18,0
chr10	35154512	.	TAA	T	10829.03	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-10.314;DP=595;FS=11.309;HRun=9;HaplotypeScore=91.8354;InbreedingCoeff=0.9880;MQ=78.23;MQ0=2;MQRankSum=-2.967;QD=28.42;ReadPosRankSum=2.877;VQSLOD=3.8034;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:75.26:0,75,1227	1/1:0,14:14:42.12:484,42,0	0/0:27,0:23:37.05:0,37,575	0/0:16,0:17:33.09:0,33,473	0/0:4,0:33:68.67:0,69,270	1/1:4,27:31:69.20:804,69,0	1/1:2,8:10:24.06:280,24,0	1/1:8,9:17:27.07:314,27,0	0/0:2,0:15:27.32:0,27,96	1/1:0,22:22:66.20:769,66,0	1/1:1,16:16:48.14:555,48,0	0/0:1,0:22:49.91:0,50,176	1/1:1,24:25:66.19:769,66,0	1/1:3,11:14:33.09:385,33,0	1/1:2,18:20:51.15:594,51,0	1/1:2,20:22:54.16:629,54,0	0/0:2,0:38:82.35:0,82,290	1/1:3,20:23:48.14:559,48,0	1/1:3,10:13:8.24:293,8,0	1/1:2,29:31:81.22:944,81,0	1/1:1,11:12:27.08:315,27,0	1/1:2,21:23:57.16:664,57,0	0/0:2,0:22:47.41:0,47,167	0/0:1,0:12:27.45:0,27,97	1/1:3,24:27:69.20:804,69,0	1/1:2,19:21:57.17:664,57,0	1/1:1,25:26:63.17:722,63,0	1/1:0,13:13:24.07:280,24,0
chr10	35154523	.	AG	A	319.62	PASS	AB=0.955;AC=3;AF=0.054;AN=56;BaseQRankSum=5.538;DP=602;FS=3.203;HRun=7;HaplotypeScore=118.8548;InbreedingCoeff=0.6673;MQ=74.15;MQ0=2;MQRankSum=-0.898;QD=8.41;ReadPosRankSum=-0.354;VQSLOD=1.1680;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:78.25:0,78,979	1/1:1,16:17:42.04:412,42,0	0/0:20,0:16:35.46:0,35,401	0/1:20,0:18:10.04:10,0,207	0/0:32,0:32:90.27:0,90,1104	0/0:28,0:28:78.19:0,78,946	0/0:8,0:8:21.07:0,21,265	0/0:23,0:23:48.13:0,48,579	0/0:12,0:12:33.10:0,33,402	0/0:24,0:24:69.22:0,69,867	0/0:21,0:20:59.38:0,59,696	0/0:23,0:23:63.19:0,63,775	0/0:27,0:27:69.22:0,69,868	0/0:13,0:13:39.12:0,39,492	0/0:19,0:19:54.17:0,54,681	0/0:23,0:23:63.20:0,63,794	0/0:41,0:41:99:0,105,1285	0/0:21,0:21:45.11:0,45,540	0/0:13,0:13:39.11:0,39,477	0/0:34,0:34:96.30:0,96,1195	0/0:11,0:11:30.09:0,30,373	0/0:21,0:21:60.19:0,60,747	0/0:22,0:22:57.18:0,57,710	0/0:12,0:12:33.09:0,33,398	0/0:29,0:29:84.27:0,84,1052	0/0:21,0:21:60.19:0,60,755	0/0:27,0:27:65.57:0,66,844	0/0:12,0:12:30.10:0,30,377
chr10	35155191	.	G	GAA	2524.32	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-1.180;DP=565;FS=0.000;HRun=10;HaplotypeScore=82.9082;InbreedingCoeff=0.9768;MQ=79.32;MQ0=0;MQRankSum=-0.787;QD=20.86;ReadPosRankSum=1.378;VQSLOD=2.9246;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:57.13:0,57,580	1/1:1,0:9:19.84:70,20,0	0/0:19,0:20:32.27:0,32,278	0/0:11,0:10:22.83:0,23,203	1/1:2,19:22:59.60:796,60,0	0/0:29,0:29:78.15:0,78,787	0/0:16,0:16:42.07:0,42,420	0/0:33,0:33:63.03:0,63,626	1/1:3,10:14:30:386,30,0	0/0:19,0:19:45.08:0,45,457	0/0:19,0:20:47.83:0,48,463	1/1:6,0:19:30.05:305,30,0	0/0:24,0:24:66.11:0,66,658	0/0:15,0:16:29.77:0,30,357	0/0:19,0:19:48.09:0,48,488	0/0:30,0:31:77.84:0,78,761	1/1:3,22:27:65.19:905,65,0	0/0:21,0:21:54.03:0,54,538	0/0:22,0:22:51.07:0,51,509	0/0:15,0:17:27.91:0,28,362	0/0:8,0:8:21.03:0,21,214	0/0:24,0:24:66.12:0,66,665	1/1:4,2:21:19.24:182,19,0	1/1:1,1:9:6.01:74,6,0	0/0:19,0:21:56.57:0,57,530	0/0:26,0:26:72.14:0,72,726	0/0:33,0:34:51.17:0,51,722	0/0:12,0:12:36.06:0,36,358
chr10	35155610	.	GT	G	2390.33	PASS	AB=0.609;AC=35;AF=0.625;AN=56;BaseQRankSum=-7.344;DP=456;FS=9.628;HRun=15;HaplotypeScore=62.3262;InbreedingCoeff=0.6278;MQ=78.81;MQ0=6;MQRankSum=3.807;QD=9.72;ReadPosRankSum=3.363;VQSLOD=2.5889;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:25:43.55:0,44,276	1/1:0,7:7:17.73:115,18,0	0/0:53,1:21:30.68:0,31,183	0/0:54,1:26:10.05:0,10,77	0/0:5,0:11:7.19:0,7,46	1/1:4,5:9:13.57:82,14,0	1/1:3,3:7:10.88:64,11,0	1/1:14,19:32:7.61:294,8,0	0/0:3,0:9:14.32:0,14,76	1/1:3,12:16:22.55:140,23,0	1/1:4,14:19:36.55:234,37,0	0/0:7,0:7:5.68:0,6,28	1/1:3,4:8:13.83:83,14,0	0/1:3,5:9:2.21:66,0,2	1/1:1,10:12:31.58:198,32,0	0/1:2,5:7:8.60:78,0,9	0/0:10,0:33:55.46:0,55,289	1/1:5,11:17:5.26:152,5,0	1/1:4,17:22:22.89:264,23,0	1/1:1,10:11:26.60:173,27,0	1/1:2,1:3:2.86:19,3,0	1/1:1,4:5:8.85:58,9,0	0/0:4,0:6:2.80:0,3,13	0/0:3,0:7:2.84:0,3,14	1/1:4,5:10:16.78:102,17,0	1/1:6,11:18:8.10:172,8,0	1/1:7,17:24:17.87:242,18,0	0/1:4,5:9:14.55:46,0,15
chr10	35155849	.	TTAAA	T	4403.03	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=10.739;DP=515;FS=9.953;HRun=0;HaplotypeScore=85.6936;InbreedingCoeff=0.9981;MQ=81.10;MQ0=0;MQRankSum=-3.029;QD=47.34;ReadPosRankSum=2.848;VQSLOD=5.2153;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:93.30:0,93,2472	0/0:7,0:7:21.07:0,21,542	0/0:17,0:17:48.14:0,48,1230	0/0:11,0:11:30.06:0,30,718	1/1:0,14:14:33.07:617,33,0	0/0:20,0:20:60.17:0,60,1551	0/0:10,0:10:30.09:0,30,782	0/0:34,0:34:93.25:0,93,2076	1/1:0,21:21:60.21:1175,60,0	0/0:20,0:20:60.19:0,60,1593	0/0:22,0:22:63.18:0,63,1588	1/1:0,11:11:24.08:478,24,0	0/0:14,0:14:39.09:0,39,914	0/0:25,0:25:75.25:0,75,2019	0/0:25,0:25:75.26:0,75,2098	0/0:16,0:16:45.15:0,45,1202	1/1:0,16:16:42.14:838,42,0	0/0:15,0:15:42.14:0,42,1167	0/0:19,0:19:51.15:0,51,1229	0/0:24,0:24:72.23:0,72,1955	0/0:17,0:17:51.14:0,51,1307	0/0:12,0:12:36.12:0,36,1007	1/1:0,14:14:35.95:677,36,0	1/1:0,17:17:33.06:617,33,0	0/0:13,0:13:39.12:0,39,956	0/0:28,0:28:84.28:0,84,2290	0/0:32,0:32:96.33:0,96,2684	0/0:9,0:9:27.08:0,27,658
chr10	35156612	.	AT	A	14349.29	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=15.064;DP=561;FS=8.894;HRun=1;HaplotypeScore=53.2744;InbreedingCoeff=0.9756;MQ=72.59;MQ0=0;MQRankSum=-2.205;QD=39.75;ReadPosRankSum=0.294;VQSLOD=4.8894;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:51.17:0,51,815	0/0:12,0:12:36.12:0,36,571	0/0:15,0:15:42.13:0,42,622	0/0:4,0:4:9.03:0,9,144	0/0:47,0:47:99:0,141,2254	1/1:0,26:26:75.25:1049,75,0	1/1:0,12:12:36.12:504,36,0	1/1:0,35:35:99:1452,105,0	0/0:12,0:12:36.12:0,36,576	1/1:0,31:31:93.31:1299,93,0	1/1:0,21:21:57.19:797,57,0	0/0:26,0:26:78.25:0,78,1224	1/1:0,22:22:63.21:881,63,0	1/1:0,16:16:45.15:629,45,0	1/1:1,17:18:6.21:665,6,0	1/1:0,22:22:63.21:881,63,0	0/0:25,0:25:75.26:0,75,1199	1/1:0,8:8:24.08:335,24,0	1/1:0,11:11:33.11:462,33,0	1/1:0,28:28:78.26:1091,78,0	1/1:0,8:8:24.08:336,24,0	1/1:0,13:13:33.11:462,33,0	0/0:30,0:30:90.31:0,90,1439	0/0:12,0:12:36.12:0,36,576	1/1:0,20:20:57.19:797,57,0	1/1:0,31:31:93.29:1283,93,0	1/1:0,24:24:66.22:923,66,0	1/1:0,15:15:36.12:503,36,0
chr10	35157131	.	C	CAAAAA	16092.51	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=1.554;DP=651;FS=13.523;HRun=16;HaplotypeScore=206.4331;InbreedingCoeff=0.7353;MQ=58.35;MQ0=8;MQRankSum=-4.438;QD=29.15;ReadPosRankSum=-2.435;VQSLOD=0.7593;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:24:5.59:0,6,231	1/1:8,0:8:12.04:264,12,0	0/0:42,0:19:10.48:0,10,306	0/0:31,0:19:4.06:0,4,149	1/1:19,5:28:60.12:1056,60,0	1/1:20,0:27:37.94:800,38,0	1/1:13,0:17:5.80:138,6,0	1/1:39,1:38:61.03:1117,61,0	1/1:16,2:23:24.08:495,24,0	1/1:28,0:28:67.75:1404,68,0	1/1:28,0:30:33.11:698,33,0	1/1:17,1:21:30.10:697,30,0	1/1:22,0:22:45.10:957,45,0	1/1:19,0:19:30.96:633,31,0	1/1:17,1:21:36.12:757,36,0	1/1:20,0:21:24.97:552,25,0	1/1:9,0:12:14.36:178,14,0	1/1:5,0:4:3.01:55,3,0	1/1:14,0:13:15.05:317,15,0	1/1:30,0:30:43.96:898,44,0	1/1:5,0:5:6.02:94,6,0	1/1:17,0:17:21.02:360,21,0	1/1:15,0:20:27.09:606,27,0	1/1:13,0:14:24.91:454,25,0	1/1:26,0:26:40.90:803,41,0	1/1:35,0:44:77.57:1433,78,0	1/1:39,0:38:46.94:959,47,0	1/1:13,0:13:18.01:365,18,0
chr10	35159648	.	A	AC	16750.79	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-17.664;DP=645;FS=4.800;HRun=4;HaplotypeScore=63.0100;InbreedingCoeff=0.9998;MQ=83.60;MQ0=0;MQRankSum=-3.131;QD=38.07;ReadPosRankSum=1.483;VQSLOD=4.7660;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:57.14:0,57,635	0/0:11,0:11:33.08:0,33,364	0/0:21,0:21:57.16:0,57,647	0/0:18,0:18:42.10:0,42,470	0/0:28,0:28:84.22:0,84,942	1/1:1,25:26:75.25:1026,75,0	1/1:4,14:18:39.13:533,39,0	1/1:3,31:34:93.25:1220,93,0	0/0:22,0:22:63.18:0,63,715	1/1:0,29:30:90.26:1206,90,0	1/1:0,22:22:66.22:902,66,0	0/0:20,0:19:57.16:0,57,647	1/1:1,13:14:36.11:480,36,0	1/1:1,28:29:81.27:1108,81,0	1/1:1,30:31:84.03:1148,84,0	1/1:0,23:23:69.23:944,69,0	0/0:13,0:13:33.09:0,33,374	1/1:2,12:14:39.13:525,39,0	1/1:4,21:25:66.22:901,66,0	1/1:3,28:31:81.27:1103,81,0	1/1:0,21:21:60.20:821,60,0	1/1:1,21:22:66.22:900,66,0	0/0:24,0:24:72.19:0,72,806	0/0:29,0:29:81.23:0,81,919	1/1:0,26:26:75.25:1026,75,0	1/1:0,25:25:75.25:1023,75,0	1/1:1,37:38:99:1434,105,0	1/1:0,11:11:33.11:451,33,0
chr10	35161069	.	TTC	T	35.12	PASS	AB=0.950;AC=12;AF=0.214;AN=56;BaseQRankSum=4.854;DP=291;FS=54.003;HRun=0;HaplotypeScore=57.7975;InbreedingCoeff=-0.1363;MQ=81.34;MQ0=4;MQRankSum=-2.398;QD=0.39;ReadPosRankSum=0.124;VQSLOD=-0.6142;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:40.03:0,40,299	0/0:1,0:1:2.94:0,3,18	0/0:41,0:16:0.86:0,1,157	0/0:24,0:14:11.67:0,12,131	0/0:11,0:11:5.95:0,6,49	0/1:12,0:12:11.53:12,0,49	0/0:10,0:9:10.79:0,11,61	0/0:15,0:15:30.47:0,30,214	0/0:4,0:4:5.38:0,5,24	0/1:9,0:9:3.15:3,0,80	0/0:4,0:4:9.30:0,9,64	0/1:2,2:4:30.10:45,0,30	1/1:1,0:1:1.55:4,2,0	0/0:5,1:6:14.64:0,15,102	0/0:6,0:6:10.43:0,10,54	0/0:12,0:12:10.06:0,10,92	0/0:18,0:18:17.10:0,17,163	0/0:10,0:10:20.59:0,21,138	0/1:13,1:13:2.94:3,0,150	0/1:8,0:8:5.70:6,0,18	0/1:2,0:2:6.94:7,0,8	0/0:4,0:4:8:0,8,39	0/1:7,0:7:19.12:44,0,19	0/0:5,1:6:7.47:0,7,60	0/1:13,0:13:22.55:23,0,104	0/0:7,1:8:16.07:0,16,102	0/1:12,0:12:1.86:2,0,41	0/1:8,1:9:11.86:12,0,72
chr10	35161071	.	CT	C	933.02	PASS	AB=0.834;AC=45;AF=0.833;AN=54;BaseQRankSum=0.676;DP=318;FS=2.421;HRun=18;HaplotypeScore=66.6856;InbreedingCoeff=0.0736;MQ=79.42;MQ0=4;MQRankSum=-0.489;QD=3.18;ReadPosRankSum=5.024;VQSLOD=-0.5553;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,4:20:2.81:83,3,0	./.	0/1:43,0:17:4.63:7,0,5	0/0:22,2:13:3.67:0,4,17	1/1:3,0:11:13.95:39,14,0	1/1:3,8:12:19.25:96,19,0	1/1:5,2:8:11.85:47,12,0	1/1:11,4:15:10.03:55,10,0	1/1:2,0:4:3.83:11,4,0	1/1:3,8:12:9.81:50,10,0	1/1:3,2:5:4.32:19,4,0	1/1:4,0:4:4.05:11,4,0	0/1:4,1:5:0.16:22,0,0	1/1:8,2:10:10.76:60,11,0	1/1:4,4:8:5.14:30,5,0	1/1:8,5:15:23.56:118,24,0	1/1:12,0:19:18.23:51,18,0	0/1:13,1:14:8.72:9,0,9	1/1:10,3:13:13.76:50,14,0	1/1:2,2:8:4.60:31,5,0	1/1:0,2:2:5.10:23,5,0	0/1:2,2:4:8.89:20,0,9	1/1:2,1:7:12.32:40,12,0	0/1:5,0:6:1.34:3,0,1	0/1:10,5:16:4.97:60,0,5	0/1:7,2:9:2.60:26,0,3	1/1:9,2:12:5.62:49,6,0	1/1:8,1:9:9.41:35,9,0
chr10	35161140	.	AG	A	1037.45	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=5.337;DP=293;FS=2.381;HRun=5;HaplotypeScore=39.7209;InbreedingCoeff=0.8002;MQ=58.83;MQ0=11;MQRankSum=-3.336;QD=14.41;ReadPosRankSum=0.408;VQSLOD=1.9354;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:20:51.16:0,51,686	0/0:4,0:4:12.04:0,12,164	0/0:16,0:5:12.03:0,12,149	0/1:15,0:7:10.56:11,0,59	1/1:5,11:13:24.07:269,24,0	0/0:6,0:6:12.04:0,12,164	0/0:18,0:16:36.07:0,36,460	0/0:21,0:19:45.15:0,45,616	1/1:1,7:8:12.03:136,12,0	0/0:12,0:12:33.08:0,33,432	0/0:5,0:5:9.03:0,9,123	1/1:0,3:3:3.01:34,3,0	0/0:6,0:6:15.05:0,15,200	0/0:7,0:7:21.07:0,21,287	0/0:5,0:5:12.04:0,12,158	0/0:9,0:9:21.07:0,21,287	1/1:2,18:19:45.13:509,45,0	0/0:16,0:16:30.10:0,30,410	0/0:12,0:8:24.08:0,24,328	0/0:6,0:6:15.05:0,15,204	0/0:7,0:6:15.05:0,15,205	0/0:4,0:4:12.04:0,12,164	1/1:0,4:4:11.98:121,12,0	1/1:0,6:6:12.03:134,12,0	0/0:11,0:10:21.07:0,21,287	0/0:8,0:7:18.06:0,18,246	0/0:7,0:7:18.06:0,18,246	0/0:19,0:19:51.17:0,51,697
chr10	35161230	.	C	CA	1220.90	PASS	AB=0.710;AC=29;AF=0.580;AN=50;BaseQRankSum=-3.795;DP=252;FS=7.180;HRun=14;HaplotypeScore=27.8221;InbreedingCoeff=0.0632;MQ=45.64;MQ0=15;MQRankSum=-0.441;QD=6.36;ReadPosRankSum=-0.480;VQSLOD=0.6620;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:7,15:20:11.59:134,0,12	1/1:3,0:6:11.48:62,11,0	./.	0/0:8,0:3:1.31:0,1,6	0/1:10,2:12:30.81:31,0,62	1/1:4,8:12:6:53,6,0	0/0:4,0:4:7.19:0,7,29	0/1:11,7:10:1.15:109,0,1	0/0:7,0:7:11.78:0,12,77	1/1:1,7:8:15:132,15,0	0/1:6,5:11:10.59:29,0,11	0/0:3,0:3:2.96:0,3,19	1/1:3,1:3:3:26,3,0	1/1:1,3:4:6:53,6,0	1/1:1,3:4:6:53,6,0	1/1:0,1:1:3:26,3,0	0/0:24,0:21:34.50:0,34,215	0/1:6,4:11:11.24:76,0,11	0/1:6,4:7:21.24:69,0,21	1/1:5,4:10:8.95:72,9,0	./.	0/1:3,0:3:0:0,0,0	./.	0/1:1,0:2:0:0,0,0	1/1:3,5:9:11.92:94,12,0	0/1:3,1:5:10.38:32,0,10	0/1:4,9:13:23.47:63,0,23	0/1:6,16:21:12.99:253,0,13
chr10	35161339	.	G	GGAATT	13031.63	PASS	AB=1.000;AC=49;AF=0.907;AN=54;BaseQRankSum=-5.088;DP=280;FS=28.787;HRun=0;HaplotypeScore=49.1741;InbreedingCoeff=0.6148;MQ=48.67;MQ0=3;MQRankSum=-8.085;QD=54.30;ReadPosRankSum=0.510;VQSLOD=2.8642;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:28:12.51:13,0,1427	1/1:0,3:3:9.03:263,9,0	0/0:12,0:7:14.84:0,15,305	0/0:26,0:21:60.21:0,60,1240	1/1:4,5:10:14.98:280,15,0	1/1:3,10:13:30.10:808,30,0	1/1:1,5:8:15.05:469,15,0	1/1:8,4:12:33.04:873,33,0	1/1:1,3:4:12.04:367,12,0	1/1:2,6:9:23.96:697,24,0	1/1:1,4:4:9.03:242,9,0	1/1:2,8:10:21.07:617,21,0	1/1:3,9:12:30.07:864,30,0	1/1:1,4:5:12.04:331,12,0	1/1:0,15:15:39.13:1218,39,0	1/1:1,11:12:33.11:995,33,0	1/1:2,12:13:18.02:489,18,0	1/1:5,6:11:13.29:379,13,0	1/1:3,5:7:18.06:563,18,0	1/1:0,3:3:9.03:244,9,0	./.	1/1:0,1:1:3.01:94,3,0	1/1:0,5:6:15.05:257,15,0	1/1:1,8:10:15.05:428,15,0	1/1:1,8:9:21.07:527,21,0	1/1:3,7:10:30.10:937,30,0	1/1:4,7:12:30.10:797,30,0	1/1:0,7:8:9.03:282,9,0
chr10	35163260	.	CTT	C	141.29	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.382;DP=465;FS=1.853;HRun=3;HaplotypeScore=52.6093;InbreedingCoeff=0.9254;MQ=84.38;MQ0=0;MQRankSum=0.945;QD=28.26;ReadPosRankSum=0.442;VQSLOD=2.5136;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:87.30:0,87,1681	1/1:0,5:5:15.05:230,15,0	0/0:16,0:16:45.15:0,45,867	0/0:17,0:17:32.03:0,32,626	0/0:23,0:23:69.24:0,69,1333	0/0:21,0:21:63.22:0,63,1216	0/0:20,0:20:60.19:0,60,1097	0/0:25,0:25:72.24:0,72,1362	0/0:18,0:18:51.17:0,51,954	0/0:15,0:15:39.13:0,39,724	0/0:18,0:18:54.17:0,54,1009	0/0:21,0:21:60.17:0,60,1122	0/0:13,0:13:36.12:0,36,695	0/0:19,0:19:57.20:0,57,1101	0/0:10,0:10:30.10:0,30,580	0/0:12,0:12:33.11:0,33,631	0/0:20,0:20:57.18:0,57,1067	0/0:14,0:14:42.11:0,42,767	0/0:18,0:18:51.17:0,51,948	0/0:19,0:19:57.18:0,57,1068	0/0:17,0:17:51.16:0,51,935	0/0:9,0:9:27.09:0,27,516	0/0:16,0:16:45.14:0,45,829	0/0:9,0:9:24.08:0,24,464	0/0:13,0:13:36.12:0,36,696	0/0:23,0:23:69.24:0,69,1333	0/0:21,0:21:63.22:0,63,1217	0/0:3,0:3:9.03:0,9,174
chr10	35163348	.	TA	T	4738.77	PASS	AB=0.709;AC=47;AF=0.839;AN=56;BaseQRankSum=-1.991;DP=396;FS=5.597;HRun=13;HaplotypeScore=62.2792;InbreedingCoeff=0.5804;MQ=72.65;MQ0=0;MQRankSum=0.132;QD=13.50;ReadPosRankSum=4.073;VQSLOD=5.3096;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:3,0:20:34:0,34,177	0/0:9,0:9:21:0,21,195	0/0:16,0:14:32.68:0,33,271	0/1:9,1:10:10.93:11,0,89	1/1:8,18:26:50.61:366,51,0	1/1:2,9:11:23.86:175,24,0	1/1:3,9:13:28.11:188,28,0	1/1:8,17:25:28.62:328,29,0	1/1:3,11:14:23.85:175,24,0	1/1:1,11:13:34.81:242,35,0	1/1:2,19:21:30.62:387,31,0	1/1:5,14:19:32.80:241,33,0	1/1:3,4:7:8.93:66,9,0	1/1:4,4:8:8.94:66,9,0	0/1:3,9:13:4.33:95,0,4	1/1:2,10:13:25.78:181,26,0	1/1:5,15:21:48.17:326,48,0	1/1:1,11:14:30.89:209,31,0	1/1:5,8:13:23.82:172,24,0	1/1:7,16:23:25.17:283,25,0	0/1:7,4:11:15.27:55,0,15	1/1:1,4:5:11.90:88,12,0	1/1:4,8:13:25.88:181,26,0	1/1:1,10:12:22.91:159,23,0	1/1:2,7:10:24.93:165,25,0	1/1:2,12:15:37.80:265,38,0	1/1:2,14:16:33.44:292,33,0	1/1:0,1:1:2.98:22,3,0
chr10	35163510	.	C	CCT	3037.82	PASS	AB=0.978;AC=40;AF=0.769;AN=52;BaseQRankSum=-6.935;DP=281;FS=3.741;HRun=0;HaplotypeScore=33.6597;InbreedingCoeff=0.1606;MQ=54.46;MQ0=21;MQRankSum=0.168;QD=12.35;ReadPosRankSum=-4.269;VQSLOD=2.2579;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:16,0:17:75.80:76,0,85	1/1:1,0:4:8.98:106,9,0	0/0:23,0:2:5.86:0,6,35	0/1:20,0:5:1.58:2,0,51	0/1:16,0:16:21.28:21,0,55	1/1:1,2:8:8.75:93,9,0	1/1:2,5:5:3.01:55,3,0	1/1:0,11:11:32.95:382,33,0	0/0:6,0:6:12.79:0,13,42	1/1:1,9:9:21.47:233,21,0	1/1:1,2:4:3.01:54,3,0	0/1:14,0:14:17.90:18,0,48	1/1:1,4:6:8.77:120,9,0	1/1:0,3:4:3.01:55,3,0	0/1:13,2:14:1.69:332,0,2	1/1:1,5:9:3.63:75,4,0	0/1:13,0:13:53.25:67,0,53	1/1:0,14:16:18.06:301,18,0	1/1:3,2:10:26.59:226,27,0	1/1:1,7:9:11.91:132,12,0	./.	1/1:1,1:2:3.01:55,3,0	0/1:11,0:11:0.85:1,0,59	0/1:9,0:9:3.96:4,0,46	1/1:2,8:10:15.05:272,15,0	1/1:1,3:6:12.03:181,12,0	1/1:11,1:12:29.90:325,30,0	./.
chr10	35163770	.	G	GA	3159.88	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-3.841;DP=464;FS=0.000;HRun=3;HaplotypeScore=60.4894;InbreedingCoeff=0.9923;MQ=75.74;MQ0=2;MQRankSum=-0.987;QD=34.35;ReadPosRankSum=1.103;VQSLOD=4.0490;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:78.24:0,78,935	0/0:9,0:9:24.07:0,24,288	0/0:21,0:17:15.93:0,16,373	0/0:24,0:19:32.59:0,33,403	1/1:1,21:22:63.21:874,63,0	0/0:20,0:20:57.17:0,57,684	0/0:13,0:13:36.11:0,36,432	0/0:13,0:12:36.09:0,36,409	1/1:0,12:12:33.11:461,33,0	0/0:16,0:16:48.14:0,48,568	0/0:11,0:11:27.07:0,27,313	1/1:1,18:19:54.18:756,54,0	0/0:25,0:25:75.21:0,75,887	0/0:21,0:21:60.17:0,60,708	0/0:21,0:21:60.18:0,60,720	0/0:23,0:23:60.18:0,60,720	1/1:2,8:11:27.09:373,27,0	0/0:10,0:10:27.04:0,27,308	0/0:21,0:20:57.16:0,57,672	0/0:14,0:14:39.11:0,39,453	0/0:13,0:13:39.12:0,39,468	0/0:10,0:10:30.08:0,30,348	1/1:2,6:8:15.05:210,15,0	1/1:3,17:20:48.16:672,48,0	0/0:10,0:10:30.09:0,30,360	0/0:20,0:20:54.11:0,54,622	0/0:22,0:22:63.19:0,63,756	0/0:8,0:8:24.07:0,24,288
chr10	35165301	.	TA	T	8383.81	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-8.310;DP=492;FS=5.859;HRun=8;HaplotypeScore=62.4347;InbreedingCoeff=0.9901;MQ=69.46;MQ0=1;MQRankSum=0.375;QD=24.23;ReadPosRankSum=0.978;VQSLOD=5.6368;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:51.10:0,51,587	0/0:2,0:6:14.30:0,14,72	0/0:18,1:16:30.90:0,31,295	0/0:11,0:7:14.58:0,15,158	0/0:1,0:26:66.25:0,66,356	1/1:2,13:15:33.05:319,33,0	1/1:4,11:15:27.04:261,27,0	1/1:5,21:26:63.09:608,63,0	0/0:1,0:6:17.37:0,17,98	1/1:4,23:27:63.07:597,63,0	1/1:0,23:22:60.09:579,60,0	0/0:3,0:14:35.10:0,35,187	1/1:0,14:14:42.07:405,42,0	1/1:1,12:13:33.05:319,33,0	1/1:0,16:16:48.08:463,48,0	1/1:1,17:18:42.07:406,42,0	0/0:7,0:24:54.65:0,55,289	1/1:3,18:21:51.08:492,51,0	1/1:0,9:9:27.04:261,27,0	1/1:2,23:25:69.10:666,69,0	1/1:1,12:13:30.05:290,30,0	1/1:2,11:13:33.05:319,33,0	0/0:4,0:11:21.37:0,21,105	0/0:1,0:8:17.72:0,18,88	1/1:1,33:34:90.14:869,90,0	1/1:2,22:24:66.09:633,66,0	1/1:1,30:31:72.11:695,72,0	1/1:0,9:9:21.03:203,21,0
chr10	35165352	.	CA	C	655.65	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=4.036;DP=440;FS=0.707;HRun=8;HaplotypeScore=64.6655;InbreedingCoeff=0.9490;MQ=72.97;MQ0=0;MQRankSum=-2.830;QD=19.87;ReadPosRankSum=-0.042;VQSLOD=3.4382;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:54.16:0,54,642	0/0:3,0:3:9.03:0,9,109	0/0:13,0:13:22.04:0,22,340	0/0:7,0:7:9.78:0,10,128	0/0:19,0:19:51.16:0,51,616	0/0:12,0:13:36.07:0,36,418	0/0:11,0:11:30.09:0,30,362	0/0:33,0:33:87.26:0,87,1042	0/0:6,0:6:18.06:0,18,217	0/0:20,0:20:54.17:0,54,651	0/0:16,0:16:39.08:0,39,455	1/1:3,15:18:48.06:458,48,0	0/0:14,0:14:33.06:0,33,377	0/0:15,0:15:45.14:0,45,543	0/0:15,0:15:42.13:0,42,507	0/0:11,0:11:33.08:0,33,375	0/0:16,0:16:36.11:0,36,435	0/0:26,0:26:72.18:0,72,842	0/0:14,0:14:33.08:0,33,377	0/0:22,0:22:57.17:0,57,688	0/0:14,0:14:33.10:0,33,399	0/0:7,0:7:18.04:0,18,206	1/1:0,6:6:18.03:174,18,0	1/1:2,7:9:17.99:165,18,0	0/0:25,0:25:63.19:0,63,761	0/0:28,0:27:72.22:0,72,869	0/0:32,0:32:78.20:0,78,925	0/0:8,0:8:24.07:0,24,290
chr10	35165586	.	A	AACC	3716.99	PASS	AB=0.841;AC=30;AF=0.536;AN=56;BaseQRankSum=1.806;DP=401;FS=72.429;HRun=0;HaplotypeScore=131.8074;InbreedingCoeff=-0.0392;MQ=36.66;MQ0=16;MQRankSum=0.994;QD=12.23;ReadPosRankSum=2.852;VQSLOD=0.7750;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:22:48.15:0,48,597	0/1:5,0:5:8.22:8,0,103	0/1:30,0:5:2.89:3,0,81	0/0:33,0:9:2.99:0,3,92	0/0:18,0:17:6.73:0,7,170	1/1:3,0:4:9.02:98,9,0	0/1:3,1:5:1.48:110,0,1	0/1:19,3:17:84.29:259,0,84	0/1:6,0:6:15.63:27,0,16	1/1:13,2:16:6.92:240,7,0	0/1:15,2:15:8.80:153,0,9	0/0:12,0:12:22:0,22,200	0/1:9,0:13:54.53:184,0,55	0/1:8,1:11:3.04:157,0,3	1/1:13,2:18:11.47:251,11,0	0/1:4,0:6:24.37:69,0,24	0/1:12,0:11:2.19:2,0,80	0/1:9,3:13:52.59:179,0,53	0/1:15,4:21:99:389,0,116	0/1:11,1:10:25.34:209,0,25	1/1:1,1:3:1.72:64,2,0	1/1:3,3:6:14.40:185,14,0	0/0:5,0:5:10.92:0,11,122	0/0:6,0:4:6.43:0,6,71	1/1:11,3:17:2.85:358,3,0	1/1:7,5:14:4.09:343,4,0	0/1:21,5:29:58.52:298,0,59	1/1:9,1:9:10.65:130,11,0
chr10	35165588	.	A	ACC	734	PASS	AB=0.942;AC=19;AF=0.339;AN=56;BaseQRankSum=-0.058;DP=399;FS=22.023;HRun=0;HaplotypeScore=132.9375;InbreedingCoeff=-0.3665;MQ=36.71;MQ0=16;MQRankSum=1.094;QD=3.22;ReadPosRankSum=6.028;VQSLOD=0.7964;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:22:48.15:0,48,612	0/0:4,0:4:9.03:0,9,113	0/0:30,0:5:10.21:0,10,103	0/0:34,0:9:7.70:0,8,83	0/0:18,0:17:33.59:0,34,291	0/1:4,1:5:19.77:35,0,20	0/1:4,1:5:5.16:61,0,5	0/0:26,0:19:40.29:0,40,274	0/1:6,0:6:3.56:4,0,44	0/1:14,1:14:22.85:23,0,171	0/1:18,0:15:8.68:9,0,193	0/0:13,0:13:12.13:0,12,194	0/1:13,1:13:50.13:50,0,79	0/1:8,0:8:37.16:37,0,48	0/1:18,0:18:49.94:90,0,50	0/1:5,1:6:24.34:24,0,30	0/0:12,0:11:22.97:0,23,174	0/1:15,0:13:40.86:41,0,133	0/1:19,2:20:90.53:91,0,236	0/1:12,1:10:6.64:7,0,112	1/1:3,0:3:2.62:45,3,0	0/1:6,0:6:15.13:63,0,15	0/0:5,0:5:11.70:0,12,103	0/0:6,0:4:5.48:0,5,60	0/1:15,1:16:59.13:91,0,59	0/1:16,1:16:62.55:101,0,63	0/1:30,1:29:94.10:94,0,127	0/1:10,1:9:23.45:23,0,44
chr10	35165595	.	AGACCC	A	5457.43	PASS	AB=0.855;AC=34;AF=0.607;AN=56;BaseQRankSum=2.620;DP=404;FS=17.900;HRun=0;HaplotypeScore=123.8773;InbreedingCoeff=-0.2175;MQ=36.94;MQ0=18;MQRankSum=-1.827;QD=16.54;ReadPosRankSum=2.307;VQSLOD=2.9709;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:20,0:21:77.39:208,0,77	0/1:5,0:5:8:87,0,8	0/0:29,1:5:10.28:0,10,105	0/0:34,1:9:11.65:0,12,173	0/1:16,4:19:99:242,0,131	0/0:4,0:4:8.49:0,8,78	1/1:5,0:5:12.11:128,12,0	0/1:22,7:22:99:186,0,186	0/1:6,0:6:10.84:149,0,11	1/1:13,2:14:20.20:301,20,0	0/1:16,2:15:12.85:205,0,13	1/1:8,1:11:20.35:221,20,0	1/1:10,2:12:5.52:399,6,0	0/1:5,4:9:15.81:204,0,16	0/1:8,9:17:8.52:373,0,9	0/1:3,3:6:5.08:202,0,5	0/1:9,1:10:11.28:215,0,11	0/1:15,1:14:62.92:177,0,63	0/1:19,2:20:99:169,0,123	0/1:11,2:10:46.51:242,0,47	0/1:3,0:2:1.38:12,0,1	1/1:6,0:6:15.17:118,15,0	1/1:2,0:3:1.56:57,2,0	1/1:6,0:5:12.02:139,12,0	1/1:12,2:14:8:343,8,0	0/1:16,1:16:99:260,0,106	0/1:18,14:30:51.88:655,0,52	1/1:11,1:10:8.05:166,8,0
chr10	35165606	.	A	AAAAGAAC	6738.42	PASS	AB=0.941;AC=32;AF=0.571;AN=56;BaseQRankSum=1.091;DP=439;FS=80.007;HRun=0;HaplotypeScore=148.7609;InbreedingCoeff=-0.3393;MQ=40.91;MQ0=19;MQRankSum=-0.287;QD=18.07;ReadPosRankSum=6.111;VQSLOD=1.2162;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:20:32.46:0,32,428	0/1:7,0:7:39.43:39,0,90	0/0:41,0:10:6.22:0,6,125	0/1:53,0:13:18.65:19,0,89	0/1:21,0:21:99:336,0,200	0/1:4,0:4:5.09:19,0,5	0/1:4,0:4:7.85:75,0,8	0/1:30,0:23:99:159,0,215	0/1:4,0:6:17.53:183,0,18	0/1:19,0:19:30.93:724,0,31	0/1:16,0:14:2.74:567,0,3	1/1:11,0:11:26.43:296,26,0	1/1:13,0:12:16.38:335,16,0	0/1:9,0:9:20.88:121,0,21	0/1:14,0:17:43.28:407,0,43	1/1:9,0:9:13.67:226,14,0	0/1:11,0:10:35.20:225,0,35	0/1:14,0:12:94.24:113,0,94	0/1:20,0:17:99:284,0,174	0/1:14,0:10:25.62:260,0,26	0/0:3,0:2:3.01:0,3,38	0/1:3,0:5:64.56:143,0,65	1/1:4,0:3:9.03:163,9,0	1/1:6,0:5:8.91:113,9,0	0/1:16,0:16:40.84:364,0,41	0/1:11,4:17:99:489,0,110	1/1:32,0:30:7.68:731,8,0	1/1:12,0:10:21.06:348,21,0
chr10	35165608	.	A	AAAAACC	6894.78	PASS	AB=0.966;AC=31;AF=0.554;AN=56;BaseQRankSum=1.533;DP=456;FS=64.985;HRun=0;HaplotypeScore=146.1559;InbreedingCoeff=-0.3005;MQ=40.87;MQ0=18;MQRankSum=-0.707;QD=18.14;ReadPosRankSum=6.383;VQSLOD=1.8562;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:20:44.78:0,45,537	0/1:7,0:7:31.41:31,0,99	0/0:47,0:14:7:0,7,96	0/1:51,0:13:19.47:19,0,63	0/1:21,0:21:99:317,0,213	0/0:4,0:4:2.05:0,2,18	1/1:4,0:4:8.74:60,9,0	0/1:33,0:26:99:119,0,275	0/1:6,0:6:20.98:179,0,21	0/1:21,0:21:21.12:622,0,21	0/1:16,0:14:3.36:505,0,3	1/1:8,1:11:27.06:418,27,0	1/1:12,0:11:22.98:422,23,0	0/1:9,0:9:47.04:79,0,47	0/1:19,0:19:40.16:339,0,40	0/1:9,0:9:11.05:188,0,11	0/1:9,1:10:40.45:250,0,40	0/1:13,0:12:91.13:130,0,91	0/1:21,1:19:99:319,0,159	0/1:13,1:12:19.81:343,0,20	0/0:3,0:2:3.01:0,3,38	0/1:5,0:5:55.18:116,0,55	1/1:3,0:3:9.03:179,9,0	1/1:4,1:5:8.98:163,9,0	0/1:15,0:16:46.69:392,0,47	0/1:18,0:19:99:482,0,116	1/1:33,0:32:13.43:779,13,0	1/1:8,0:10:21.06:442,21,0
chr10	35165954	.	A	AC	21224.72	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-9.941;DP=638;FS=1.040;HRun=1;HaplotypeScore=63.3421;InbreedingCoeff=0.8935;MQ=60.38;MQ0=3;MQRankSum=2.989;QD=39.09;ReadPosRankSum=1.802;VQSLOD=5.5124;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,99,1284	1/1:0,10:10:30.10:449,30,0	0/0:28,0:22:10.41:0,10,449	0/0:29,0:19:1.05:0,1,324	1/1:2,24:27:63.21:927,63,0	1/1:0,18:18:48.16:719,48,0	1/1:0,31:31:78.26:1150,78,0	1/1:0,20:20:54.11:730,54,0	1/1:0,27:27:72.24:1076,72,0	1/1:1,15:16:45.15:674,45,0	1/1:0,12:11:30.10:449,30,0	1/1:0,23:23:63.21:940,63,0	1/1:2,22:24:63.20:924,63,0	1/1:2,21:23:57.19:853,57,0	1/1:0,25:25:66.22:988,66,0	1/1:0,16:16:42.14:629,42,0	1/1:0,18:18:51.17:764,51,0	1/1:1,29:30:75.25:1124,75,0	1/1:2,22:24:69.19:997,69,0	1/1:1,23:24:66.22:987,66,0	1/1:3,28:31:78.26:1168,78,0	1/1:0,13:13:39.13:574,39,0	1/1:1,19:20:51.41:804,51,0	1/1:1,39:40:99:1637,111,0	1/1:1,16:17:42.14:620,42,0	1/1:0,20:19:57.18:829,57,0	1/1:0,21:21:51.17:763,51,0	1/1:2,11:12:30.10:449,30,0
chr10	35166342	.	GA	G	8562.96	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-2.526;DP=622;FS=5.128;HRun=10;HaplotypeScore=79.3592;InbreedingCoeff=0.9746;MQ=64.10;MQ0=0;MQRankSum=-3.800;QD=21.14;ReadPosRankSum=0.212;VQSLOD=5.6883;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:40.07:0,40,647	1/1:0,13:13:32.99:286,33,0	0/0:13,1:14:7.02:0,7,299	0/0:16,0:16:12.03:0,12,280	0/0:36,1:37:35.69:0,36,807	1/1:1,19:21:59.02:500,59,0	1/1:2,15:17:41.98:365,42,0	1/1:8,28:36:83.89:718,84,0	0/0:28,1:29:49.15:0,49,770	1/1:7,12:20:41.02:344,41,0	1/1:7,17:24:23.78:431,24,0	0/0:5,0:19:48.74:0,49,276	1/1:4,15:19:47.98:417,48,0	1/1:1,17:18:47.98:417,48,0	1/1:2,32:35:80.02:683,80,0	1/1:0,27:27:80.98:703,81,0	0/0:24,0:24:63.17:0,63,696	1/1:3,15:18:44.95:386,45,0	1/1:3,15:18:14.73:343,15,0	1/1:6,27:33:80.96:703,81,0	1/1:0,7:7:17.91:156,18,0	1/1:4,15:19:41.98:365,42,0	0/0:5,0:34:82.60:0,83,419	0/0:5,0:19:43.02:0,43,235	1/1:4,19:23:59.97:518,60,0	1/1:2,20:23:62.02:527,62,0	1/1:5,22:27:65.98:572,66,0	1/1:0,7:7:14.99:130,15,0
chr10	35168401	.	G	GA	5906.75	PASS	AB=0.900;AC=35;AF=0.625;AN=56;BaseQRankSum=-4.230;DP=552;FS=2.953;HRun=11;HaplotypeScore=117.6049;InbreedingCoeff=0.8442;MQ=52.76;MQ0=18;MQRankSum=-1.101;QD=17.17;ReadPosRankSum=-1.725;VQSLOD=4.0004;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:11.94:0,12,323	0/0:8,0:8:14.90:0,15,111	0/0:19,0:2:5.67:0,6,34	0/0:18,0:3:5.97:0,6,46	0/0:32,0:33:21.80:0,22,300	1/1:16,1:17:10.70:287,11,0	1/1:15,0:15:26.16:196,26,0	1/1:27,2:29:65.71:552,66,0	0/0:15,0:15:18.19:0,18,148	1/1:23,3:27:30.70:443,31,0	1/1:17,1:18:41.94:355,42,0	0/0:14,0:14:10.80:0,11,165	1/1:15,0:15:14.81:258,15,0	1/1:15,0:15:35.71:281,36,0	1/1:22,0:22:50.38:398,50,0	1/1:24,0:24:35.46:428,35,0	0/0:40,0:40:97.92:0,98,673	1/1:19,1:20:38.36:342,38,0	0/1:8,1:7:7.97:87,0,8	1/1:33,1:34:79.48:679,79,0	1/1:3,0:2:2.99:24,3,0	1/1:10,0:9:9.58:120,10,0	0/0:16,0:16:22.39:0,22,144	0/0:16,0:16:30.94:0,31,222	1/1:12,0:12:31.50:220,32,0	1/1:28,1:30:48.81:609,49,0	1/1:32,0:31:58.77:459,59,0	1/1:9,0:9:18.01:169,18,0
chr10	35168414	.	TA	T	6167.50	PASS	AB=0.967;AC=41;AF=0.732;AN=56;BaseQRankSum=-4.745;DP=573;FS=10.802;HRun=11;HaplotypeScore=111.4725;InbreedingCoeff=0.7098;MQ=58.01;MQ0=10;MQRankSum=-0.011;QD=13.44;ReadPosRankSum=-3.475;VQSLOD=2.8320;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,23:30:44.62:362,45,0	0/0:1,0:5:11.02:0,11,52	0/1:22,1:6:9.77:10,0,65	0/0:25,0:8:4.58:0,5,82	0/1:30,2:32:80.89:81,0,150	1/1:14,1:15:28.37:180,28,0	1/1:17,1:18:37.49:267,37,0	1/1:31,1:32:82.07:594,82,0	0/0:12,0:12:23.97:0,24,134	1/1:24,1:25:52.98:399,53,0	1/1:19,0:18:44.36:298,44,0	0/1:17,0:17:1.82:2,0,104	1/1:15,1:16:44.41:312,44,0	1/1:14,0:14:37.55:244,38,0	1/1:25,0:25:64.52:443,65,0	1/1:23,0:23:59.68:396,60,0	0/0:41,0:41:71.09:0,71,450	1/1:22,0:21:41.78:268,42,0	1/1:13,1:12:32.60:250,33,0	1/1:33,0:33:46.28:482,46,0	1/1:2,0:2:5.94:43,6,0	1/1:11,1:11:18.35:186,18,0	0/0:15,0:15:7.87:0,8,84	0/0:16,0:16:32.21:0,32,167	1/1:14,1:15:36.19:250,36,0	1/1:35,0:35:74.57:562,75,0	1/1:21,3:24:56.70:397,57,0	1/1:12,0:12:17.92:142,18,0
chr10	35168707	.	CAT	C	15492.94	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=14.696;DP=641;FS=8.475;HRun=0;HaplotypeScore=79.1190;InbreedingCoeff=0.9999;MQ=87.29;MQ0=2;MQRankSum=-4.631;QD=37.70;ReadPosRankSum=1.379;VQSLOD=6.9208;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,105,1894	0/0:11,0:11:33.11:0,33,605	0/0:24,0:24:65.39:0,65,1171	0/0:20,0:20:57.19:0,57,944	0/0:22,0:22:66.23:0,66,1196	1/1:0,19:19:42.14:602,42,0	1/1:1,20:21:57.19:817,57,0	1/1:4,26:30:72.24:1029,72,0	0/0:25,0:25:72.25:0,72,1312	1/1:0,25:25:75.25:1072,75,0	1/1:3,19:21:47.76:664,48,0	0/0:24,0:24:63.22:0,63,1140	1/1:0,22:22:63.21:903,63,0	1/1:0,22:22:51.17:731,51,0	1/1:4,33:37:90.30:1290,90,0	1/1:1,43:44:99:1720,120,0	0/0:32,0:32:93.32:0,93,1703	1/1:0,17:17:48.16:688,48,0	1/1:3,15:18:45.13:603,45,0	1/1:0,24:24:66.22:946,66,0	1/1:1,24:24:69.23:989,69,0	1/1:0,18:18:54.18:767,54,0	0/0:15,0:15:42.14:0,42,763	0/0:20,0:20:54.18:0,54,961	1/1:0,12:12:36.12:516,36,0	1/1:1,20:21:60.17:824,60,0	1/1:1,21:22:57.19:817,57,0	1/1:0,12:12:36.12:516,36,0
chr10	35169037	.	TTTC	T	381.38	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.758;DP=595;FS=2.627;HRun=0;HaplotypeScore=79.2918;InbreedingCoeff=0.9784;MQ=67.05;MQ0=0;MQRankSum=2.260;QD=38.14;ReadPosRankSum=1.556;VQSLOD=4.2743;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:57.15:0,57,1194	1/1:0,10:10:30.10:476,30,0	0/0:24,0:22:54.18:0,54,1108	0/0:19,0:16:20.01:0,20,668	0/0:28,0:28:75.26:0,75,1625	0/0:37,0:37:99:0,105,2260	0/0:17,0:17:42.14:0,42,888	0/0:29,0:29:72.25:0,72,1555	0/0:20,0:20:45.15:0,45,978	0/0:31,0:31:84.29:0,84,1828	0/0:18,0:18:48.16:0,48,1047	0/0:18,0:18:51.18:0,51,1109	0/0:29,0:29:84.29:0,84,1782	0/0:23,0:23:63.22:0,63,1354	0/0:36,0:36:99:0,99,2155	0/0:19,0:19:57.20:0,57,1247	0/0:18,0:18:45.15:0,45,984	0/0:6,0:6:18.06:0,18,388	0/0:12,0:12:33.11:0,33,705	0/0:29,0:29:81.28:0,81,1762	0/0:17,0:17:48.16:0,48,1029	0/0:18,0:18:54.17:0,54,1119	0/0:22,0:22:63.22:0,63,1368	0/0:15,0:15:39.13:0,39,837	0/0:17,0:17:48.16:0,48,978	0/0:23,0:23:63.22:0,63,1351	0/0:35,0:35:93.30:0,93,1939	0/0:6,0:6:18.06:0,18,394
chr10	35169228	.	G	GA	2745.99	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-10.181;DP=544;FS=0.000;HRun=8;HaplotypeScore=50.5120;InbreedingCoeff=0.9936;MQ=76.81;MQ0=0;MQRankSum=-2.376;QD=24.74;ReadPosRankSum=2.816;VQSLOD=4.2011;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:51.01:0,51,467	0/0:13,0:13:39.02:0,39,357	0/0:15,0:15:19.78:0,20,242	0/0:10,0:10:17.99:0,18,165	1/1:3,20:23:57.14:644,57,0	0/0:23,0:23:69.04:0,69,632	0/0:12,0:12:36:0,36,324	0/0:29,0:29:75.02:0,75,683	1/1:1,14:15:36.11:415,36,0	0/0:30,0:30:84.02:0,84,763	0/0:18,1:19:16.40:0,16,401	1/1:4,15:19:48.10:537,48,0	0/0:21,0:21:60.03:0,60,549	0/0:16,0:17:47.05:0,47,418	0/0:20,0:20:57.03:0,57,522	0/0:19,1:20:25.41:0,25,487	1/1:5,20:25:29.70:596,30,0	0/0:14,0:14:39.02:0,39,357	0/0:11,0:11:33.02:0,33,302	0/0:25,0:25:72.04:0,72,659	0/0:14,0:14:32.99:0,33,297	0/0:28,0:28:75.04:0,75,686	1/1:3,16:20:41.96:465,42,0	1/1:1,8:9:24.07:277,24,0	0/0:25,0:25:72.03:0,72,659	0/0:27,0:27:75.03:0,75,683	0/0:23,0:23:51:0,51,460	0/0:11,0:11:27.01:0,27,247
chr10	35169872	.	T	TA	1922.05	PASS	AB=0.933;AC=15;AF=0.268;AN=56;BaseQRankSum=-8.587;DP=442;FS=6.590;HRun=10;HaplotypeScore=48.4474;InbreedingCoeff=0.8331;MQ=61.09;MQ0=0;MQRankSum=1.093;QD=17.96;ReadPosRankSum=0.797;VQSLOD=4.0684;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:24:49.94:0,50,400	1/1:1,4:5:9.02:96,9,0	0/0:8,0:7:17:0,17,127	0/0:3,0:4:0.45:0,0,1	1/1:2,12:14:11.41:315,11,0	0/0:16,0:16:41.93:0,42,345	0/0:5,0:5:11.99:0,12,99	0/0:45,0:45:99:0,114,931	1/1:5,15:20:42.11:448,42,0	0/0:25,0:25:53.91:0,54,443	0/0:16,0:16:32.94:0,33,271	1/1:5,8:13:23.71:245,24,0	0/0:9,0:9:23.97:0,24,197	0/1:13,1:14:2.04:2,0,192	0/0:20,0:20:53.94:0,54,443	0/0:16,0:16:41.93:0,42,342	1/1:2,23:25:57.14:608,57,0	0/0:31,0:31:77.86:0,78,637	0/0:15,0:15:32.93:0,33,268	0/0:20,0:20:44.89:0,45,363	0/0:5,0:5:14.98:0,15,123	0/0:5,0:5:5.99:0,6,49	1/1:3,8:11:2.43:231,2,0	1/1:0,5:5:15.04:160,15,0	0/0:18,0:19:37.95:0,38,301	0/0:24,0:24:53.89:0,54,441	0/0:15,0:15:41.92:0,42,340	0/0:11,0:11:29.97:0,30,246
chr10	35170783	.	TGA	T	11386.32	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=10.535;DP=544;FS=14.097;HRun=0;HaplotypeScore=71.6889;InbreedingCoeff=0.9734;MQ=77.87;MQ0=1;MQRankSum=-1.323;QD=33.49;ReadPosRankSum=2.890;VQSLOD=6.2899;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:96.33:0,96,1680	0/0:4,0:4:9.03:0,9,158	0/0:17,0:17:36.12:0,36,609	0/0:16,0:16:41.85:0,42,647	0/0:20,0:20:36.12:0,36,625	1/1:1,19:20:51.17:690,51,0	1/1:4,21:25:60.20:812,60,0	1/1:2,23:25:69.20:901,69,0	0/0:19,0:19:54.18:0,54,943	1/1:3,6:9:15.04:187,15,0	1/1:2,19:21:48.16:649,48,0	0/0:24,0:24:69.22:0,69,1170	1/1:1,17:18:45.15:609,45,0	1/1:2,13:15:39.13:527,39,0	1/1:1,18:19:48.16:645,48,0	1/1:2,25:27:69.23:929,69,0	0/0:28,0:28:81.25:0,81,1378	1/1:2,18:20:48.16:645,48,0	1/1:3,14:17:42.14:567,42,0	1/1:2,24:26:69.23:933,69,0	1/1:2,27:28:72.24:974,72,0	1/1:0,11:11:33.11:446,33,0	0/0:15,0:15:36.12:0,36,610	0/0:26,1:27:37.72:0,38,1274	1/1:2,16:18:42.14:568,42,0	1/1:0,18:18:54.15:697,54,0	1/1:5,14:19:39.13:527,39,0	1/1:3,0:3:6.02:81,6,0
chr10	35171672	.	C	CT	22247.43	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-10.046;DP=645;FS=0.531;HRun=1;HaplotypeScore=54.7943;InbreedingCoeff=0.9983;MQ=64.35;MQ0=5;MQRankSum=-2.970;QD=39.52;ReadPosRankSum=1.888;VQSLOD=5.3722;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:93.30:0,93,1205	1/1:1,13:14:39.13:585,39,0	0/0:25,0:14:39.59:0,40,488	0/0:24,0:14:39.08:0,39,466	1/1:0,16:16:42.14:630,42,0	1/1:2,26:28:72.24:1079,72,0	1/1:1,32:33:72.24:1079,72,0	1/1:1,24:23:66.22:979,66,0	1/1:1,15:16:33.11:495,33,0	1/1:0,16:16:45.13:653,45,0	1/1:1,20:21:57.19:854,57,0	1/1:0,30:30:72.24:1079,72,0	1/1:1,23:24:68.77:1018,69,0	1/1:0,25:25:69.23:1034,69,0	1/1:0,29:29:78.26:1169,78,0	1/1:1,32:33:84.28:1259,84,0	1/1:0,31:31:87.29:1304,87,0	1/1:0,20:20:54.18:809,54,0	1/1:2,20:22:51.17:765,51,0	1/1:4,19:23:66.18:940,66,0	1/1:0,34:34:93.32:1394,93,0	1/1:1,19:20:54.14:784,54,0	1/1:0,13:13:35.85:539,36,0	1/1:1,22:23:60.20:899,60,0	1/1:0,16:16:45.15:675,45,0	1/1:0,22:22:66.22:989,66,0	1/1:0,22:22:63.21:944,63,0	1/1:0,7:7:21.04:292,21,0
chr10	35171828	.	AG	A	6842.80	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-4.407;DP=610;FS=0.657;HRun=1;HaplotypeScore=101.2903;InbreedingCoeff=0.7504;MQ=60.16;MQ0=1;MQRankSum=5.339;QD=11.74;ReadPosRankSum=-3.347;VQSLOD=1.9646;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:26,1:26:74.49:566,74,0	1/1:9,0:9:13.73:64,14,0	0/0:16,0:10:10.87:0,11,130	0/0:11,0:8:4.11:0,4,108	1/1:27,1:28:55.09:433,55,0	1/1:26,1:27:47.39:347,47,0	1/1:26,4:30:34.68:368,35,0	1/1:32,0:31:50.80:418,51,0	1/1:18,1:19:9.46:198,9,0	1/1:23,0:23:46.22:308,46,0	1/1:20,2:22:39.59:331,40,0	1/1:23,1:24:24.99:243,25,0	1/1:15,2:17:29.44:248,29,0	1/1:19,1:20:32.65:260,33,0	1/1:36,1:37:53.97:376,54,0	1/1:26,0:26:31.20:223,31,0	1/1:24,0:24:19.32:149,19,0	1/1:14,0:14:1.58:34,2,0	1/1:11,1:12:15.64:112,16,0	1/1:31,2:33:40.13:291,40,0	1/1:12,1:13:17.61:131,18,0	1/1:21,0:21:36.56:213,37,0	1/1:20,0:20:26.90:212,27,0	1/1:17,2:19:26.54:214,27,0	1/1:20,0:20:28.02:162,28,0	1/1:22,0:22:45.06:349,45,0	1/1:30,4:32:38.98:459,39,0	1/1:10,0:10:19.77:136,20,0
chr10	35172614	.	TA	T	2811.41	PASS	AB=0.763;AC=36;AF=0.643;AN=56;BaseQRankSum=-2.114;DP=529;FS=2.873;HRun=15;HaplotypeScore=68.6608;InbreedingCoeff=0.2261;MQ=71.54;MQ0=0;MQRankSum=0.170;QD=6.57;ReadPosRankSum=2.427;VQSLOD=2.9052;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:33.21:0,33,256	1/1:2,1:7:11.54:46,12,0	0/1:18,1:16:17.75:18,0,74	0/1:4,1:5:9.88:10,0,34	0/0:32,0:32:34.38:0,34,265	0/1:11,14:25:33.97:170,0,34	0/1:7,8:16:6.78:38,0,7	1/1:7,15:22:14.52:210,15,0	0/1:17,1:18:3.15:3,0,114	0/1:18,12:30:32.80:137,0,33	1/1:5,9:14:8.09:118,8,0	0/0:6,0:21:22.37:0,22,154	1/1:11,18:29:41.16:269,41,0	1/1:6,10:17:28.37:172,28,0	1/1:3,17:24:29.71:171,30,0	1/1:3,11:15:6.18:166,6,0	0/1:9,1:10:42.37:42,0,71	0/1:5,10:15:8.41:62,0,8	1/1:7,21:28:4.12:306,4,0	0/1:9,14:23:8.02:173,0,8	0/1:6,3:9:26.53:27,0,38	1/1:8,8:17:10.74:63,11,0	0/0:6,0:17:11.84:0,12,74	0/0:3,0:12:11.61:0,12,69	1/1:9,14:23:19.62:120,20,0	1/1:9,15:25:40.12:250,40,0	1/1:3,23:26:53.12:346,53,0	1/1:3,6:10:13.28:78,13,0
chr10	35177108	.	GA	G	6629.08	PASS	AB=0.701;AC=45;AF=0.804;AN=56;BaseQRankSum=5.270;DP=572;FS=15.316;HRun=12;HaplotypeScore=73.7611;InbreedingCoeff=0.6653;MQ=70.69;MQ0=0;MQRankSum=0.064;QD=12.92;ReadPosRankSum=3.174;VQSLOD=3.3511;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,21:24:23.07:402,23,0	1/1:0,0:12:20.37:60,20,0	0/0:21,0:17:15.56:0,16,231	0/0:11,0:9:6.10:0,6,42	1/1:5,0:30:36.14:106,36,0	0/1:10,17:27:7.10:318,0,7	1/1:1,6:7:17.93:139,18,0	1/1:8,22:31:64.75:493,65,0	1/1:0,0:19:32.59:96,33,0	1/1:8,24:33:22.78:458,23,0	1/1:2,19:21:50.76:394,51,0	0/1:23,3:26:23.65:24,0,437	1/1:4,17:21:14.37:295,14,0	1/1:1,9:10:23.91:186,24,0	1/1:3,16:20:10.45:254,10,0	1/1:4,21:25:35.30:457,35,0	1/1:1,0:15:26.48:78,26,0	1/1:4,12:16:35.85:279,36,0	1/1:6,19:25:59.59:452,60,0	1/1:6,0:33:48.86:141,49,0	1/1:1,8:9:23.91:186,24,0	1/1:4,19:23:47.77:371,48,0	0/0:18,0:19:41.91:0,42,404	0/0:7,0:7:15.03:0,15,152	0/1:5,11:16:0.58:179,0,1	1/1:4,24:30:72.78:545,73,0	1/1:2,28:30:77.70:604,78,0	1/1:1,9:10:14.94:116,15,0
chr10	35177487	.	GGAATAT	G	893.65	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.753;DP=427;FS=10.402;HRun=0;HaplotypeScore=86.2352;InbreedingCoeff=0.9649;MQ=80.27;MQ0=0;MQRankSum=-6.194;QD=55.85;ReadPosRankSum=-0.958;VQSLOD=3.1367;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:57.20:0,57,2011	1/1:0,16:16:42.14:988,42,0	0/0:13,0:13:30.10:0,30,1046	0/0:10,0:10:30.10:0,30,976	0/0:30,0:30:87.28:0,87,2932	0/0:10,0:10:27.09:0,27,904	0/0:10,0:10:30.10:0,30,1025	0/0:42,0:42:99:0,120,4019	0/0:11,0:11:33.11:0,33,1140	0/0:20,0:20:60.21:0,60,2095	0/0:19,0:19:57.20:0,57,1998	0/0:8,0:8:21.07:0,21,742	0/0:14,0:14:42.14:0,42,1462	0/0:7,0:7:18.06:0,18,635	0/0:10,0:10:30.10:0,30,1002	0/0:13,0:13:39.13:0,39,1335	0/0:22,0:22:60.18:0,60,2011	0/0:12,0:12:33.11:0,33,1133	0/0:20,0:20:54.19:0,54,1856	0/0:17,0:17:51.18:0,51,1800	0/0:14,0:14:42.14:0,42,1460	0/0:11,0:11:33.11:0,33,1165	0/0:12,0:12:36.12:0,36,1240	0/0:7,0:7:21.07:0,21,734	0/0:11,0:11:30.09:0,30,978	0/0:17,0:17:51.18:0,51,1706	0/0:26,0:25:75.26:0,75,2509	0/0:5,0:5:15.05:0,15,529
chr10	35178019	.	G	GT	2880.38	PASS	AB=0.909;AC=7;AF=0.125;AN=56;BaseQRankSum=-10.668;DP=684;FS=2.747;HRun=4;HaplotypeScore=63.2939;InbreedingCoeff=0.8416;MQ=83.73;MQ0=0;MQRankSum=-2.662;QD=32.00;ReadPosRankSum=1.241;VQSLOD=4.3424;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:96.24:0,96,1067	0/0:8,0:8:24.07:0,24,272	0/0:29,0:29:75.18:0,75,826	0/0:12,0:12:30.05:0,30,324	1/1:3,41:44:99:1641,120,0	0/0:23,0:23:63.18:0,63,714	0/0:17,0:17:45.13:0,45,510	0/0:31,0:31:87.23:0,87,970	1/1:0,15:15:45.11:594,45,0	0/0:28,0:28:78.22:0,78,885	0/0:26,0:26:72.20:0,72,816	0/0:21,0:21:60.17:0,60,681	0/0:19,0:19:57.16:0,57,646	0/0:30,0:30:78.22:0,78,884	0/0:37,0:37:99:0,102,1148	0/0:24,0:24:69.18:0,69,772	1/1:0,21:21:57.19:780,57,0	0/1:9,1:10:13.94:14,0,245	0/0:20,0:20:57.15:0,57,639	0/0:44,0:44:99:0,120,1361	0/0:28,0:28:81.23:0,81,919	0/0:22,0:22:60.17:0,60,680	0/0:37,0:37:99:0,108,1216	0/0:15,0:15:45.09:0,45,496	0/0:15,0:15:42.12:0,42,476	0/0:20,0:20:60.16:0,60,670	0/0:31,0:31:84.21:0,84,933	0/0:22,0:22:66.19:0,66,749
chr10	35178885	.	A	AT	19620.84	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-1.049;DP=729;FS=1.594;HRun=2;HaplotypeScore=104.8693;InbreedingCoeff=0.9992;MQ=88.73;MQ0=0;MQRankSum=-4.605;QD=41.84;ReadPosRankSum=1.711;VQSLOD=4.4581;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,102,1321	1/1:0,9:9:27.09:405,27,0	0/0:33,0:33:90.29:0,90,1152	0/0:20,0:20:60.13:0,60,743	0/0:36,0:36:99:0,105,1362	1/1:1,29:30:78.26:1169,78,0	1/1:0,13:13:39.13:585,39,0	1/1:3,39:42:99:1834,123,0	0/0:23,0:23:69.21:0,69,881	1/1:0,29:29:87.29:1303,87,0	1/1:2,19:21:51.13:739,51,0	0/0:35,0:35:99:0,105,1326	1/1:1,35:38:99:1512,102,0	1/1:1,18:19:54.18:810,54,0	1/1:1,35:36:99:1484,99,0	1/1:1,26:27:75.25:1123,75,0	0/0:31,0:31:87.28:0,87,1130	1/1:0,11:11:33.11:494,33,0	1/1:1,22:23:69.22:1014,69,0	1/1:1,28:29:81.27:1214,81,0	1/1:0,35:35:99:1574,105,0	1/1:2,18:21:48.16:719,48,0	0/0:20,0:20:60.15:0,60,728	0/0:28,0:28:84.26:0,84,1076	1/1:0,18:18:48.16:719,48,0	1/1:0,25:25:75.25:1124,75,0	1/1:1,35:35:99:1484,99,0	1/1:0,7:7:21.07:315,21,0
chr10	35179080	.	TC	T	2520.39	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.476;DP=740;FS=8.522;HRun=4;HaplotypeScore=70.8301;InbreedingCoeff=0.9983;MQ=91.96;MQ0=0;MQRankSum=-2.134;QD=31.50;ReadPosRankSum=2.868;VQSLOD=4.1504;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:72.23:0,72,989	0/0:8,0:8:20.98:0,21,269	0/0:33,0:33:78.25:0,78,1060	0/0:30,0:30:79.78:0,80,1046	1/1:3,30:33:87.27:1044,87,0	0/0:30,0:30:90.30:0,90,1260	0/0:23,0:23:69.21:0,69,934	0/0:35,0:35:99:0,99,1386	1/1:1,22:23:66.20:792,66,0	0/0:29,0:29:84.27:0,84,1162	0/0:26,0:26:69.21:0,69,930	0/0:31,0:31:93.31:0,93,1301	0/0:26,0:26:72.24:0,72,1008	0/0:19,0:19:54.18:0,54,756	0/0:35,0:35:99:0,105,1421	0/0:30,0:30:87.28:0,87,1197	1/1:1,23:24:69.21:828,69,0	0/0:10,0:10:30.10:0,30,420	0/0:27,0:27:78.24:0,78,1060	0/0:35,0:35:99:0,102,1378	0/0:31,0:31:87.28:0,87,1193	0/0:26,0:26:69.23:0,69,966	0/0:30,0:30:87.29:0,87,1211	0/0:18,0:18:54.15:0,54,721	0/0:21,0:21:60.20:0,60,840	0/0:28,0:28:81.27:0,81,1134	0/0:37,0:37:99:0,108,1511	0/0:17,0:17:51.17:0,51,714
chr10	35179158	.	AGT	A	149.18	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.113;DP=672;FS=6.063;HRun=0;HaplotypeScore=81.6168;InbreedingCoeff=0.9838;MQ=86.43;MQ0=0;MQRankSum=-1.800;QD=21.31;ReadPosRankSum=-0.106;VQSLOD=3.7546;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,117,1998	1/1:0,7:7:18.06:240,18,0	0/0:22,0:22:60.20:0,60,993	0/0:23,0:23:60.67:0,61,1002	0/0:27,0:27:75.26:0,75,1299	0/0:33,0:33:90.31:0,90,1555	0/0:18,0:18:51.17:0,51,883	0/0:31,0:31:84.29:0,84,1441	0/0:23,0:23:63.22:0,63,1086	0/0:29,0:29:78.26:0,78,1326	0/0:21,0:21:36.12:0,36,601	0/0:31,0:31:87.30:0,87,1493	0/0:34,0:34:96.30:0,96,1621	0/0:23,0:23:66.23:0,66,1132	0/0:28,0:28:75.26:0,75,1283	0/0:25,0:25:72.25:0,72,1236	0/0:25,0:25:69.24:0,69,1184	0/0:7,0:7:18.06:0,18,312	0/0:18,0:18:42.14:0,42,721	0/0:19,0:19:51.17:0,51,883	0/0:29,0:29:87.28:0,87,1469	0/0:30,0:30:75.26:0,75,1296	0/0:15,0:15:39.13:0,39,675	0/0:26,0:26:78.27:0,78,1351	0/0:16,0:16:42.14:0,42,705	0/0:21,0:21:63.22:0,63,1091	0/0:33,0:33:90.31:0,90,1546	0/0:17,0:17:51.13:0,51,824
chr10	35179503	.	T	TAAA	11811.66	PASS	AB=0.641;AC=47;AF=0.839;AN=56;BaseQRankSum=-1.901;DP=622;FS=16.690;HRun=13;HaplotypeScore=108.9061;InbreedingCoeff=0.0040;MQ=66.15;MQ0=3;MQRankSum=-2.508;QD=19.59;ReadPosRankSum=0.194;VQSLOD=1.9325;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,0:19:14.95:33,15,0	0/1:1,0:9:14.88:15,0,18	0/0:19,0:12:3.24:0,3,99	0/1:15,0:10:10.43:21,0,10	0/1:14,1:33:35:93,0,35	1/1:6,21:33:64.01:946,64,0	1/1:8,3:19:24.02:335,24,0	1/1:13,11:28:56.70:784,57,0	1/1:4,0:21:17.19:71,17,0	1/1:14,6:34:61.25:767,61,0	1/1:7,17:28:60:844,60,0	0/1:7,0:26:29.29:29,0,82	1/1:7,5:14:27.09:444,27,0	1/1:4,17:23:31.28:467,31,0	1/1:5,17:26:45.08:667,45,0	1/1:2,24:31:69.62:1137,70,0	0/1:1,0:14:15.85:46,0,16	1/1:1,5:7:12.04:214,12,0	1/1:7,3:10:10.24:125,10,0	1/1:7,21:30:74.97:1071,75,0	1/1:4,7:13:13.29:217,13,0	1/1:11,12:24:39.61:568,40,0	0/1:8,0:26:37.94:67,0,38	0/1:6,1:14:67.47:67,0,77	1/1:11,14:26:33.01:452,33,0	1/1:15,22:48:99:1554,113,0	1/1:5,12:20:35.11:508,35,0	1/1:1,10:11:15.05:268,15,0
chr10	35180005	.	T	TTTCC	2711.97	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-9.081;DP=731;FS=0.000;HRun=0;HaplotypeScore=117.5961;InbreedingCoeff=0.9878;MQ=69.30;MQ0=2;MQRankSum=-1.138;QD=34.77;ReadPosRankSum=3.025;VQSLOD=3.7650;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:21:54.13:0,54,852	0/0:14,0:14:42.14:0,42,688	0/0:30,0:28:45.07:0,45,615	0/0:20,0:17:17.67:0,18,231	0/0:20,0:20:42.14:0,42,689	0/0:36,0:36:90.29:0,90,1452	0/0:23,0:23:42.10:0,42,614	0/0:29,0:29:33.10:0,33,516	0/0:32,0:32:69.19:0,69,1038	0/0:41,0:40:93.28:0,93,1469	0/0:23,0:23:48.14:0,48,738	1/1:12,18:33:39.13:953,39,0	0/0:28,0:28:66.22:0,66,1062	0/0:30,0:30:60.19:0,60,949	0/0:34,0:34:75.24:0,75,1208	0/0:29,0:29:63.18:0,63,942	0/0:20,0:20:39.09:0,39,587	0/0:9,0:9:15.05:0,15,243	0/0:17,0:17:18.05:0,18,252	0/0:32,0:32:69.21:0,69,1079	0/0:43,0:43:87.26:0,87,1379	0/0:24,0:24:60.17:0,60,912	1/1:7,13:20:37.01:875,37,0	1/1:7,18:25:42.14:1027,42,0	0/0:14,0:14:30.09:0,30,469	0/0:25,0:25:66.22:0,66,1061	0/0:40,0:40:87.26:0,87,1358	0/0:17,0:17:30.05:0,30,416
chr10	35180254	.	A	AGT	2720.83	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-6.715;DP=687;FS=1.039;HRun=0;HaplotypeScore=108.9945;InbreedingCoeff=0.9773;MQ=69.07;MQ0=1;MQRankSum=0.823;QD=39.43;ReadPosRankSum=-0.016;VQSLOD=5.4127;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:54.14:0,54,654	0/0:7,0:7:18.06:0,18,223	0/0:28,0:25:15.34:0,15,355	0/0:15,0:14:12.08:0,12,249	1/1:4,25:29:75.26:1228,75,0	0/0:30,0:30:75.22:0,75,916	0/0:24,0:24:45.13:0,45,544	0/0:39,1:40:29:0,29,871	1/1:2,20:22:60.20:981,60,0	0/0:29,0:29:72.23:0,72,893	0/0:25,0:25:72.21:0,72,880	0/0:30,0:31:84.09:0,84,1017	0/0:36,0:36:93.24:0,93,1112	0/0:19,0:19:45.14:0,45,558	0/0:29,0:29:84.25:0,84,1027	0/0:30,1:32:34.87:0,35,919	1/1:3,15:18:42.01:654,42,0	0/0:9,0:9:24.08:0,24,298	0/0:21,0:21:44.49:0,44,519	0/0:32,0:32:78.24:0,78,967	0/0:8,0:8:18.06:0,18,223	0/0:22,0:22:54.17:0,54,669	0/0:34,0:34:90.28:0,90,1115	0/0:18,0:18:48.15:0,48,594	0/0:25,0:25:69.20:0,69,841	0/0:30,0:30:78.23:0,78,947	0/0:39,0:38:99:0,102,1264	0/0:11,0:11:33.07:0,33,381
chr10	35180603	.	TTTTTG	T	304.79	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.985;DP=574;FS=0.000;HRun=0;HaplotypeScore=103.2739;InbreedingCoeff=0.9412;MQ=69.44;MQ0=3;MQRankSum=-0.748;QD=33.87;ReadPosRankSum=0.145;VQSLOD=3.1326;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:63.22:0,63,1731	1/1:2,7:9:21.07:397,21,0	0/0:19,0:14:14.74:0,15,300	0/0:21,0:11:14.88:0,15,232	0/0:22,0:22:51.16:0,51,1394	0/0:24,0:24:57.19:0,57,1592	0/0:21,0:21:48.16:0,48,1371	0/0:31,0:31:51.18:0,51,1433	0/0:18,0:18:42.14:0,42,1214	0/0:18,0:18:36.09:0,36,952	0/0:25,0:25:60.21:0,60,1728	0/0:19,0:19:48.16:0,48,1329	0/0:20,0:19:42.14:0,42,1164	0/0:18,0:18:48.15:0,48,1294	0/0:31,0:31:66.23:0,66,1893	0/0:21,0:21:48.16:0,48,1336	0/0:20,0:20:30.10:0,30,828	0/0:8,0:8:18.06:0,18,517	0/0:23,0:23:42.14:0,42,1144	0/0:23,0:23:60.21:0,60,1727	0/0:7,0:7:15.03:0,15,322	0/0:21,0:21:51.18:0,51,1474	0/0:21,0:21:57.20:0,57,1607	0/0:17,0:17:42.14:0,42,1134	0/0:23,0:23:54.19:0,54,1562	0/0:20,0:20:45.63:0,46,1301	0/0:31,0:31:81.28:0,81,2323	0/0:16,0:16:45.15:0,45,1210
chr10	35180756	.	TCAAAA	T	9350.73	PASS	AB=1.000;AC=41;AF=0.732;AN=56;BaseQRankSum=6.393;DP=477;FS=0.000;HRun=0;HaplotypeScore=98.7398;InbreedingCoeff=0.6771;MQ=73.69;MQ0=4;MQRankSum=-1.609;QD=26.12;ReadPosRankSum=1.123;VQSLOD=4.6114;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,4:12:27.09:395,27,0	0/1:6,0:6:14.60:15,0,126	0/0:33,0:22:19.95:0,20,634	0/0:31,0:22:20.61:0,21,518	0/1:17,0:17:14.85:15,0,236	1/1:3,11:14:12.04:232,12,0	1/1:6,14:20:15.01:230,15,0	1/1:5,13:18:39.13:689,39,0	0/0:10,0:10:3.58:0,4,311	1/1:7,19:26:57.16:887,57,0	1/1:5,15:21:48.15:703,48,0	0/0:16,0:16:42.08:0,42,1012	1/1:2,12:14:15.05:291,15,0	1/1:2,9:11:18.06:349,18,0	1/1:3,16:19:18.06:349,18,0	1/1:2,10:12:18.06:349,18,0	0/1:13,0:13:74.62:75,0,117	1/1:15,0:15:33.09:442,33,0	1/1:6,13:19:39.12:619,39,0	1/1:3,25:28:72.15:1068,72,0	1/1:11,1:12:27.05:412,27,0	1/1:7,11:18:33.11:569,33,0	0/0:15,0:15:33.11:0,33,896	0/0:14,0:14:36.12:0,36,812	1/1:4,17:21:27.09:523,27,0	1/1:2,15:17:45.10:765,45,0	1/1:3,16:19:12.02:198,12,0	1/1:5,1:6:12.03:178,12,0
chr10	35180772	.	CAAACA	C	2334.94	PASS	AB=1.000;AC=28;AF=0.500;AN=56;BaseQRankSum=9.233;DP=497;FS=3.571;HRun=0;HaplotypeScore=135.9243;InbreedingCoeff=-0.1861;MQ=60.08;MQ0=8;MQRankSum=-5.751;QD=6.54;ReadPosRankSum=10.707;VQSLOD=0.7593;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:12,0:12:37.10:37,0,102	1/1:8,0:8:15.05:268,15,0	0/0:35,0:18:17.88:0,18,237	0/0:35,0:17:9.17:0,9,108	1/1:14,1:15:30.08:430,30,0	0/1:15,0:15:75.46:75,0,137	0/1:17,0:17:36.84:37,0,141	0/1:22,0:22:66.66:67,0,411	1/1:8,1:9:3.01:57,3,0	0/1:20,0:20:33.52:84,0,34	0/1:23,0:23:79.37:79,0,208	0/0:24,0:24:56.84:0,57,1175	1/1:12,0:12:13.78:100,14,0	0/1:12,0:12:73.55:87,0,74	0/1:23,0:23:83.97:84,0,223	0/1:13,0:13:40.23:95,0,40	1/1:6,7:13:13.99:284,14,0	0/0:17,0:17:1.80:0,2,156	0/1:18,0:17:65.63:66,0,115	0/1:34,0:34:99:153,0,218	0/1:10,0:10:13.26:13,0,40	1/1:12,0:12:20.66:153,21,0	0/0:15,0:15:42.12:0,42,836	0/0:13,0:13:27.03:0,27,498	0/1:19,0:19:63:180,0,63	0/1:18,0:18:64.37:134,0,64	0/1:23,0:24:23.12:23,0,175	0/1:8,0:8:3.24:3,0,219
chr10	35180786	.	CA	C	346.29	PASS	AB=0.935;AC=11;AF=0.196;AN=56;BaseQRankSum=4.309;DP=492;FS=0.515;HRun=4;HaplotypeScore=115.4187;InbreedingCoeff=-0.2298;MQ=52.75;MQ0=7;MQRankSum=-2.772;QD=2.32;ReadPosRankSum=0.301;VQSLOD=-0.5071;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:13,0:13:28.08:28,0,121	0/1:6,3:9:39.28:39,0,50	0/0:32,1:15:18.93:0,19,198	0/0:36,0:11:13.57:0,14,127	0/1:13,4:17:9.47:243,0,9	0/0:14,0:14:32.94:0,33,360	0/1:18,0:18:0.06:0,0,333	0/1:26,0:26:33.25:33,0,549	0/1:3,0:3:2.26:2,0,34	0/0:15,0:15:13.01:0,13,231	0/0:25,0:24:26.83:0,27,446	0/0:23,0:22:64.18:0,64,826	0/0:13,0:12:11.13:0,11,113	0/0:16,0:16:0.86:0,1,191	0/0:25,0:25:44.55:0,45,549	0/0:15,0:15:2.70:0,3,219	0/1:16,1:17:49.13:49,0,82	0/1:11,1:12:3.41:3,0,260	0/0:18,0:17:0.93:0,1,257	0/0:33,0:33:58.25:0,58,641	0/1:5,1:6:17.26:17,0,113	0/1:10,0:10:18.57:34,0,19	0/0:19,0:19:51.12:0,51,646	0/0:13,0:13:30.01:0,30,351	0/1:18,0:18:29.19:29,0,265	0/0:16,0:16:13.09:0,13,257	0/0:21,0:21:25.85:0,26,347	0/0:8,0:8:24.07:0,24,319
chr10	35180799	.	C	CA	291.04	PASS	AB=0.965;AC=16;AF=0.286;AN=56;BaseQRankSum=-0.872;DP=516;FS=6.635;HRun=12;HaplotypeScore=131.5831;InbreedingCoeff=-0.2511;MQ=59.84;MQ0=3;MQRankSum=-0.959;QD=1.23;ReadPosRankSum=-3.904;VQSLOD=-0.4694;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:15:6.93:136,7,0	0/0:4,0:10:14.87:0,15,53	0/0:23,2:13:4.59:0,5,59	0/0:39,0:14:20.23:0,20,86	0/1:21,0:21:8.86:9,0,36	0/1:16,1:17:1.98:2,0,93	0/1:15,2:17:23.99:24,0,90	0/1:26,0:25:45.51:46,0,90	0/0:4,0:4:6.66:0,7,36	0/0:18,0:18:0.91:0,1,73	0/0:23,1:23:4.02:0,4,115	0/0:24,0:23:53.71:0,54,377	0/1:16,0:15:18.36:27,0,18	0/1:15,0:15:6.68:7,0,80	0/0:27,0:27:36.38:0,36,209	0/0:17,0:17:15.89:0,16,94	0/1:17,0:17:9.59:10,0,75	0/0:12,0:12:11.03:0,11,69	0/1:20,1:21:59.23:59,0,62	0/0:37,0:37:2.67:0,3,186	0/1:5,0:6:6.31:6,0,11	0/1:9,0:9:7.86:8,0,32	0/1:16,1:17:22.71:23,0,165	0/1:8,0:10:9.21:9,0,56	0/1:20,0:20:67.63:68,0,97	0/0:19,0:19:6.51:0,7,121	0/0:22,0:22:29.03:0,29,129	0/1:9,1:10:3.73:4,0,63
chr10	35180802	.	A	AC	232.42	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=0.035;DP=519;FS=0.805;HRun=0;HaplotypeScore=128.5681;InbreedingCoeff=0.8855;MQ=65.57;MQ0=2;MQRankSum=-0.661;QD=16.60;ReadPosRankSum=2.196;VQSLOD=5.9340;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,11:14:16.80:322,17,0	0/0:10,0:10:29.85:0,30,230	0/0:31,0:17:16.20:0,16,198	0/0:40,0:16:36.89:0,37,327	0/0:22,0:22:51.18:0,51,426	0/0:17,0:17:43.76:0,44,457	0/0:16,0:16:25.80:0,26,423	0/0:26,0:25:68.08:0,68,696	0/0:4,0:4:11.98:0,12,116	0/0:18,0:18:47.54:0,48,478	0/0:25,0:24:65.23:0,65,650	0/0:25,0:24:69.16:0,69,866	0/0:18,0:17:41.10:0,41,360	0/0:15,0:15:26.34:0,26,324	0/0:27,0:27:71.87:0,72,781	0/0:16,0:16:41.98:0,42,418	0/0:17,0:17:20.86:0,21,351	0/0:11,0:11:13.14:0,13,267	0/0:19,0:19:37.06:0,37,405	0/0:36,0:36:99:0,102,951	0/0:6,0:6:14.69:0,15,126	0/0:7,0:7:14.74:0,15,149	0/0:17,0:17:42.45:0,42,502	0/0:10,0:10:20.21:0,20,201	0/0:20,0:20:41.20:0,41,424	0/0:19,0:19:47.70:0,48,576	0/0:23,0:23:60.02:0,60,608	0/0:10,0:10:25.84:0,26,315
chr10	35183021	.	G	GC	398.89	PASS	AB=0.789;AC=10;AF=0.227;AN=44;BaseQRankSum=4.667;DP=166;FS=7.195;HRun=2;HaplotypeScore=47.8466;InbreedingCoeff=-0.3554;MQ=70.97;MQ0=0;MQRankSum=-4.667;QD=5.11;ReadPosRankSum=2.624;VQSLOD=0.6820;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:2,2:4:35.56:36,0,44	./.	0/0:6,0:5:12.10:0,12,165	0/0:4,0:2:9.03:0,9,117	0/0:1,0:1:3.01:0,3,39	./.	0/1:11,5:16:97.55:98,0,295	0/0:2,0:2:6.02:0,6,78	0/1:3,2:5:73.28:74,0,73	0/1:6,3:9:99:106,0,149	./.	0/1:3,1:4:32.78:39,0,33	0/1:5,2:7:71.27:71,0,93	0/0:2,1:3:3.01:0,3,39	0/0:2,0:2:6.02:0,6,78	./.	0/1:13,1:14:2.61:3,0,461	0/0:6,0:6:17.73:0,18,205	0/1:4,1:5:35.70:36,0,63	./.	0/0:35,0:35:57.51:0,58,684	0/1:6,1:7:32.75:33,0,104	0/0:4,0:4:9.03:0,9,114	0/0:19,0:19:39.96:0,40,479	0/0:4,0:4:6.01:0,6,64	0/1:5,1:7:29.16:29,0,109	0/0:1,0:1:3.01:0,3,39	./.
chr10	35183029	.	GCCGC	G	68.58	PASS	AB=0.823;AC=5;AF=0.119;AN=42;BaseQRankSum=3.284;DP=147;FS=7.657;HRun=0;HaplotypeScore=38.3993;InbreedingCoeff=-0.2382;MQ=66.19;MQ0=0;MQRankSum=-2.772;QD=2.02;ReadPosRankSum=-0.024;VQSLOD=0.1025;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:1,1:2:47.95:48,0,73	./.	0/0:4,0:4:9.03:0,9,202	0/0:2,0:1:3.01:0,3,78	0/0:1,0:1:3.01:0,3,79	./.	0/1:13,1:14:18.25:18,0,625	0/0:2,0:2:3.01:0,3,78	0/1:2,1:3:43.59:44,0,147	0/1:7,1:8:33.48:33,0,338	./.	0/0:4,0:4:11.95:0,12,188	0/0:5,0:5:5.57:0,6,158	0/0:1,0:1:3.01:0,3,49	0/0:2,0:2:6.02:0,6,158	./.	0/0:15,0:15:45.11:0,45,1095	0/1:6,1:7:30.77:31,0,354	./.	./.	0/0:32,2:34:54.19:0,54,1398	0/0:7,0:7:5.70:0,6,157	0/0:4,0:4:5.99:0,6,100	0/0:19,0:19:39.13:0,39,929	0/0:3,0:3:9.03:0,9,236	0/0:5,0:5:2.99:0,3,24	0/0:2,0:2:3.01:0,3,78	./.
chr10	35183720	.	GA	G	1327.90	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.528;DP=525;FS=1.105;HRun=10;HaplotypeScore=51.4217;InbreedingCoeff=0.9101;MQ=68.14;MQ0=0;MQRankSum=0.586;QD=20.12;ReadPosRankSum=1.747;VQSLOD=4.5721;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:90.24:0,90,995	0/0:10,0:10:30.05:0,30,314	0/0:6,0:7:11.68:0,12,99	0/0:5,1:6:0.49:0,0,9	0/0:23,0:23:63.15:0,63,681	0/0:24,0:24:60.09:0,60,641	0/0:14,0:14:42.06:0,42,450	0/0:31,0:30:81.20:0,81,882	0/0:13,0:14:41.95:0,42,445	0/0:21,0:21:57.15:0,57,630	0/0:21,0:22:59.98:0,60,636	1/1:2,21:23:48.07:506,48,0	0/0:18,0:18:51.14:0,51,564	0/0:19,0:19:57.15:0,57,628	0/0:19,0:19:48.12:0,48,524	0/0:18,0:18:48.13:0,48,531	0/0:17,0:17:51.14:0,51,564	0/0:24,0:26:65.92:0,66,674	0/0:19,0:19:51.10:0,51,542	0/0:19,0:19:51.11:0,51,548	0/0:20,0:20:54.13:0,54,588	0/0:16,0:16:42.10:0,42,456	1/1:3,24:27:68.98:599,69,0	1/1:1,15:16:41.99:365,42,0	0/0:16,0:16:45.12:0,45,498	0/0:11,0:12:32.91:0,33,332	0/0:27,0:26:78.15:0,78,839	0/0:6,0:5:18.05:0,18,199
chr10	35184089	.	G	GA	16622.81	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-15.059;DP=782;FS=0.610;HRun=6;HaplotypeScore=70.0212;InbreedingCoeff=0.9999;MQ=82.55;MQ0=0;MQRankSum=-5.609;QD=31.36;ReadPosRankSum=1.866;VQSLOD=5.4165;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,46:50:99:1547,123,0	0/0:12,0:12:36.08:0,36,367	0/0:29,0:28:65.67:0,66,662	0/0:16,0:16:39.09:0,39,397	0/0:24,0:24:51.11:0,51,518	1/1:3,20:23:54.17:679,54,0	1/1:1,23:24:63.20:793,63,0	1/1:5,30:35:90.20:1062,90,0	0/0:42,0:42:99:0,111,1116	1/1:3,39:42:99:1358,111,0	1/1:1,22:23:32.66:724,33,0	0/0:42,0:42:99:0,111,1132	1/1:3,16:19:48.15:602,48,0	1/1:2,26:28:75.24:944,75,0	1/1:2,26:28:60.19:755,60,0	1/1:3,25:28:60.19:755,60,0	0/0:35,0:35:99:0,102,1041	1/1:4,21:25:63.20:783,63,0	1/1:3,24:27:75.20:925,75,0	1/1:2,20:22:60.19:752,60,0	1/1:1,28:28:78.25:981,78,0	1/1:2,26:28:78.20:954,78,0	0/0:24,0:24:66.14:0,66,668	0/0:28,0:28:72.16:0,72,734	1/1:2,16:18:45.14:566,45,0	1/1:6,25:31:75.24:938,75,0	1/1:3,26:29:59.95:755,60,0	1/1:0,21:20:60.19:749,60,0
chr10	35184436	.	G	GAAGCTATTCT	74997.37	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-7.199;DP=816;FS=6.595;HRun=0;HaplotypeScore=202.3201;InbreedingCoeff=0.9978;MQ=70.53;MQ0=0;MQRankSum=-16.307;QD=109.33;ReadPosRankSum=-1.474;VQSLOD=3.9199;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,22:43:84.29:3973,84,0	1/1:2,7:10:27.09:1316,27,0	0/0:26,0:26:65.94:0,66,1740	0/0:18,0:18:45.11:0,45,1130	1/1:10,13:25:42.14:1663,42,0	1/1:11,18:30:87.30:4049,87,0	1/1:18,12:34:78.27:3429,78,0	1/1:19,12:37:99:4337,102,0	1/1:14,17:34:87.30:3953,87,0	1/1:14,21:38:99:4766,105,0	1/1:10,8:20:48.16:1677,48,0	0/0:36,0:36:99:0,102,3327	1/1:10,23:37:87.30:4055,87,0	1/1:11,22:37:93.05:4169,93,0	1/1:11,27:43:99:4924,108,0	1/1:9,28:38:99:4964,102,0	1/1:3,7:12:18.06:788,18,0	1/1:7,5:16:33.11:1488,33,0	1/1:17,5:24:69.23:2593,69,0	1/1:7,11:20:42.62:1785,43,0	1/1:11,10:24:45.15:1841,45,0	1/1:12,20:34:93.32:3530,93,0	0/0:20,0:20:57.20:0,57,1760	0/0:30,0:30:78.27:0,78,2536	1/1:14,18:34:81.28:3542,81,0	1/1:11,28:44:99:5572,123,0	1/1:9,26:38:96.80:4615,97,0	1/1:5,9:14:42.14:1969,42,0
chr10	35185850	.	A	AC	20465.34	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-12.451;DP=710;FS=1.334;HRun=5;HaplotypeScore=63.4783;InbreedingCoeff=0.9994;MQ=84.19;MQ0=0;MQRankSum=-4.883;QD=34.22;ReadPosRankSum=5.038;VQSLOD=4.9439;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,42:45:99:1539,117,0	1/1:0,12:12:36.12:474,36,0	0/0:26,0:25:57.08:0,57,585	0/0:17,0:17:33:0,33,328	1/1:2,23:25:60.20:789,60,0	1/1:2,28:30:66.21:868,66,0	1/1:3,15:18:45.15:592,45,0	1/1:2,33:35:99:1287,99,0	1/1:1,27:28:75.24:987,75,0	1/1:2,25:27:78.23:1006,78,0	1/1:4,18:22:48.16:631,48,0	0/0:29,0:29:78.17:0,78,829	1/1:1,20:21:60.20:789,60,0	1/1:2,17:19:42.14:553,42,0	1/1:4,27:31:78.25:1026,78,0	1/1:0,25:25:75.24:987,75,0	1/1:2,30:32:84.27:1105,84,0	1/1:0,16:16:45.15:592,45,0	1/1:1,27:28:81.24:1045,81,0	1/1:1,32:33:90.21:1144,90,0	1/1:5,31:36:90.29:1183,90,0	1/1:1,29:30:81.26:1065,81,0	0/0:20,0:20:54.14:0,54,580	0/0:20,0:20:57.11:0,57,601	1/1:1,26:27:72.23:947,72,0	1/1:3,19:22:57.19:749,57,0	1/1:2,22:24:60.06:789,60,0	1/1:4,8:12:24.08:316,24,0
chr10	35187195	.	CTT	C	6034.25	PASS	AB=1.000;AC=41;AF=0.732;AN=56;BaseQRankSum=4.240;DP=534;FS=20.723;HRun=14;HaplotypeScore=72.1846;InbreedingCoeff=0.8499;MQ=75.06;MQ0=2;MQRankSum=-0.946;QD=14.40;ReadPosRankSum=4.507;VQSLOD=2.0160;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,18:23:35.95:333,36,0	1/1:0,8:8:21.02:194,21,0	0/1:28,0:19:53.83:54,0,129	0/0:9,0:7:6.08:0,6,35	0/0:24,1:25:45:0,45,700	1/1:7,21:28:53.93:497,54,0	1/1:5,12:18:20.82:241,21,0	1/1:8,16:24:25.09:388,25,0	0/0:12,0:12:27.08:0,27,360	1/1:7,7:15:11.61:152,12,0	1/1:7,12:19:26.55:234,27,0	0/0:12,0:13:30.05:0,30,356	1/1:5,10:18:26.39:218,26,0	1/1:6,13:19:23.91:221,24,0	1/1:2,16:20:29.85:320,30,0	1/1:4,11:15:19.24:191,19,0	0/0:15,0:15:39.06:0,39,487	1/1:3,18:23:40.45:379,40,0	1/1:5,15:21:47.28:397,47,0	1/1:7,15:22:15.77:332,16,0	1/1:3,4:8:5.84:102,6,0	1/1:3,15:19:8.44:262,8,0	0/0:23,1:27:31.34:0,31,626	0/0:14,0:14:33.09:0,33,444	1/1:5,17:22:32.94:300,33,0	1/1:10,12:23:32.83:305,33,0	1/1:4,24:29:56.75:512,57,0	1/1:0,15:16:44.79:401,45,0
chr10	35189121	.	C	CT	3120.46	PASS	AB=0.681;AC=35;AF=0.625;AN=56;BaseQRankSum=-3.460;DP=640;FS=0.998;HRun=14;HaplotypeScore=76.4198;InbreedingCoeff=0.0029;MQ=66.85;MQ0=3;MQRankSum=1.515;QD=5.74;ReadPosRankSum=-0.361;VQSLOD=2.4796;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,1:34:14.65:91,15,0	1/1:13,0:13:10.52:86,11,0	0/0:25,0:18:20:0,20,117	0/1:33,0:22:19.45:19,0,77	0/1:15,3:32:19.06:135,0,19	0/1:7,13:20:21.81:202,0,22	0/1:5,12:17:7.26:67,0,7	0/1:20,8:27:11.78:147,0,12	1/1:9,1:27:12.41:71,12,0	1/1:16,14:30:2.80:239,3,0	1/1:12,11:22:4.59:153,5,0	0/0:21,0:25:39.17:0,39,236	1/1:7,13:21:18.72:148,19,0	0/1:12,10:22:29.44:118,0,29	0/1:12,15:26:34.05:186,0,34	0/1:7,14:21:8.53:181,0,9	1/1:17,4:24:48.50:318,49,0	0/1:5,8:14:30.88:114,0,31	1/1:11,4:15:8.97:73,9,0	0/1:10,15:30:15.20:197,0,15	1/1:4,7:11:18:158,18,0	1/1:5,14:19:14.84:120,15,0	0/0:21,0:22:4.89:0,5,151	0/0:22,0:24:37.39:0,37,236	0/1:12,12:24:1.57:93,0,2	1/1:6,12:20:3.73:169,4,0	0/1:11,13:24:0.66:114,0,1	0/1:6,4:10:4.26:91,0,4
chr10	35191525	.	G	GT	13673.07	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-3.369;DP=649;FS=5.190;HRun=8;HaplotypeScore=78.5362;InbreedingCoeff=0.9865;MQ=68.51;MQ0=2;MQRankSum=-4.623;QD=25.95;ReadPosRankSum=0.443;VQSLOD=5.5512;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,27:29:40.32:701,40,0	1/1:0,0:4:11.40:58,11,0	0/0:31,0:23:38.67:0,39,436	0/0:13,0:14:20.17:0,20,183	0/0:32,0:32:87.04:0,87,794	1/1:4,16:20:27.08:311,27,0	1/1:4,16:20:33.10:381,33,0	1/1:6,29:35:87.24:986,87,0	0/0:25,0:25:57:0,57,512	1/1:1,25:26:75.21:855,75,0	1/1:6,22:28:38.71:681,39,0	1/1:2,13:15:36.11:413,36,0	1/1:3,22:25:48.14:554,48,0	1/1:4,28:32:72.13:811,72,0	1/1:2,18:20:36.11:413,36,0	1/1:5,25:29:63.19:727,63,0	0/0:20,0:19:53.98:0,54,486	1/1:2,16:17:42.12:481,42,0	1/1:4,27:31:81.22:923,81,0	1/1:1,19:20:51.15:588,51,0	1/1:1,16:17:42.12:485,42,0	1/1:2,7:9:15.04:170,15,0	1/1:3,15:19:38.95:427,39,0	1/1:0,20:20:48.14:554,48,0	1/1:3,24:27:72.21:830,72,0	1/1:2,35:37:99:1177,102,0	1/1:4,25:29:38.74:698,39,0	1/1:3,13:16:39.12:450,39,0
chr10	35191786	.	AGTGT	A	421.15	PASS	AB=0.722;AC=9;AF=0.180;AN=50;BaseQRankSum=2.490;DP=512;FS=4.395;HRun=0;HaplotypeScore=93.1157;InbreedingCoeff=0.5445;MQ=59.11;MQ0=10;MQRankSum=0.346;QD=4.58;ReadPosRankSum=0.503;VQSLOD=1.7929;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:39:29.93:0,30,505	0/0:9,0:10:9.03:0,9,136	./.	./.	1/1:17,0:18:0.47:1,0,0	0/0:20,0:20:12:0,12,176	0/0:19,0:18:13.87:0,14,189	0/0:18,0:17:2.99:0,3,23	1/1:12,0:14:6.01:56,6,0	0/0:20,0:19:25.02:0,25,471	0/0:17,0:17:15.05:0,15,231	0/1:8,4:13:13.87:83,0,14	0/0:16,0:14:3.48:0,3,51	0/0:19,0:19:12.04:0,12,195	0/0:16,0:17:15.03:0,15,262	0/0:11,0:10:15.05:0,15,278	./.	0/0:12,0:14:6.02:0,6,93	0/0:17,0:16:6.02:0,6,104	0/0:20,0:20:21.04:0,21,300	0/0:17,0:14:21.03:0,21,271	0/0:16,0:15:18.06:0,18,315	1/1:14,1:14:6.02:90,6,0	1/1:22,8:30:21.07:319,21,0	0/0:13,0:16:6.02:0,6,94	0/0:20,0:19:14.98:0,15,237	0/0:16,0:15:15.05:0,15,241	0/0:7,0:10:9.03:0,9,143
chr10	35193936	.	T	TTG	4935.25	PASS	AB=0.986;AC=25;AF=0.446;AN=56;BaseQRankSum=10.324;DP=531;FS=18.795;HRun=0;HaplotypeScore=426.0099;InbreedingCoeff=-0.7026;MQ=42.09;MQ0=1;MQRankSum=-2.563;QD=10.50;ReadPosRankSum=-1.583;VQSLOD=3.2782;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:20,2:21:99:310,0,153	0/1:11,0:11:55.10:123,0,55	0/1:13,0:9:25.63:26,0,87	0/0:10,0:7:8.89:0,9,118	0/0:39,0:39:54.50:0,55,500	0/1:13,1:14:94.90:95,0,303	0/1:8,1:9:99:147,0,112	0/1:23,0:21:99:251,0,277	0/0:8,0:8:19.90:0,20,91	0/1:42,0:42:99:352,0,675	0/1:31,0:31:99:360,0,277	0/1:17,0:17:99:249,0,106	0/1:13,0:13:99:112,0,213	0/1:22,1:23:99:271,0,212	0/1:21,0:21:99:190,0,189	0/1:14,0:14:99:119,0,121	0/0:4,0:4:10.20:0,10,76	0/1:7,0:7:70.31:178,0,70	0/1:12,0:11:99:117,0,102	0/1:35,0:35:99:580,0,189	1/1:2,1:3:2.99:25,3,0	0/1:22,0:22:61.45:342,0,61	0/1:37,0:37:99:424,0,399	0/1:10,0:10:25.51:131,0,26	0/1:20,0:20:97.49:97,0,265	0/1:26,0:26:99:217,0,249	0/1:31,1:32:99:183,0,374	0/1:13,0:13:38.78:39,0,267
chr10	35193951	.	G	GTTTTA	2737.47	PASS	AB=1.000;AC=16;AF=0.286;AN=56;BaseQRankSum=9.041;DP=644;FS=7.330;HRun=0;HaplotypeScore=215.7499;InbreedingCoeff=0.0770;MQ=45.36;MQ0=2;MQRankSum=-2.671;QD=8.86;ReadPosRankSum=-1.904;VQSLOD=1.7444;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:11.25:0,11,386	0/0:12,0:12:18.03:0,18,328	0/0:18,0:13:3.99:0,4,286	0/0:18,0:13:2.96:0,3,416	1/1:23,22:45:17.11:1714,17,0	0/1:19,0:19:70.07:70,0,224	0/0:13,0:13:10.66:0,11,241	0/0:29,0:27:7.11:0,7,575	1/1:1,10:11:21.07:647,21,0	0/1:45,0:45:77.44:77,0,882	0/0:32,0:32:2.04:0,2,612	0/0:20,0:20:17.06:0,17,484	0/1:17,0:17:32.83:33,0,275	0/1:27,0:27:2.59:3,0,569	0/0:29,0:29:30.22:0,30,664	0/0:19,0:19:27.63:0,28,427	1/1:7,3:10:17.92:283,18,0	0/0:11,0:11:1.22:0,1,196	0/1:14,0:13:16.11:16,0,153	0/0:43,0:43:24.98:0,25,1111	0/0:6,0:6:11.60:0,12,107	0/0:26,0:26:57.09:0,57,728	0/1:36,0:36:1.46:1,0,551	0/1:13,0:13:12.86:13,0,127	0/1:22,0:22:9.32:9,0,416	0/0:32,0:32:25.80:0,26,828	0/1:37,0:37:23.67:24,0,719	0/1:13,0:13:9.16:9,0,124
chr10	35194890	.	G	GGTGT	2669.30	PASS	AB=0.661;AC=14;AF=0.250;AN=56;BaseQRankSum=-0.959;DP=692;FS=1.970;HRun=0;HaplotypeScore=163.1218;InbreedingCoeff=0.7250;MQ=64.53;MQ0=9;MQRankSum=-3.012;QD=13.35;ReadPosRankSum=-2.425;VQSLOD=3.2514;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:29,12:48:90.66:324,0,91	1/1:7,7:14:21.06:487,21,0	0/0:30,0:20:9:0,9,99	0/0:32,0:22:6.01:0,6,95	1/1:13,0:13:6.02:115,6,0	0/0:27,0:30:57.18:0,57,868	0/0:22,0:22:38.67:0,39,528	0/0:25,0:27:26.97:0,27,346	1/1:29,0:34:15.69:413,16,0	0/0:42,0:44:50.77:0,51,809	0/0:20,0:22:45.13:0,45,656	0/1:7,11:19:29.69:341,0,30	0/0:21,0:24:42.11:0,42,587	0/0:21,0:20:39.09:0,39,553	0/0:20,0:22:38.66:0,39,598	0/0:23,0:22:45.15:0,45,716	1/1:31,0:30:11.82:184,12,0	0/0:20,0:20:30.04:0,30,426	0/0:16,0:15:5.51:0,6,75	0/0:20,0:20:21.07:0,21,334	0/0:34,0:34:26.67:0,27,409	0/0:17,0:19:31.43:0,31,418	1/1:9,5:14:12.04:262,12,0	1/1:11,12:25:32.77:726,33,0	0/0:20,0:21:37:0,37,555	0/0:30,0:30:41.32:0,41,621	0/0:24,0:24:45.12:0,45,670	0/0:7,0:7:17.97:0,18,189
chr10	35195964	.	AGAG	A	17321.88	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=12.001;DP=849;FS=13.120;HRun=0;HaplotypeScore=164.1704;InbreedingCoeff=0.9605;MQ=68.02;MQ0=6;MQRankSum=-2.376;QD=33.63;ReadPosRankSum=3.673;VQSLOD=4.7042;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:37,0:37:90.28:1343,90,0	0/0:2,0:2:6.02:0,6,128	0/0:51,0:35:29.42:0,29,1019	0/0:59,0:42:74.74:0,75,1328	0/0:33,0:33:84.26:0,84,1711	1/1:6,18:24:44.47:626,44,0	1/1:4,28:32:69.19:1030,69,0	1/1:6,17:22:48.15:716,48,0	0/0:41,0:41:99:0,108,2282	1/1:2,32:34:96.24:1375,96,0	1/1:1,24:25:59.97:811,60,0	0/0:39,0:39:99:0,108,2278	1/1:2,28:30:63.21:966,63,0	1/1:5,21:26:41.83:640,42,0	1/1:1,33:34:93.32:1426,93,0	1/1:5,18:23:45.15:676,45,0	0/0:40,0:40:99:0,108,2116	1/1:5,18:24:4.38:514,4,0	1/1:3,14:17:42.11:592,42,0	1/1:2,20:22:54.15:802,54,0	1/1:0,39:39:90.26:1354,90,0	1/1:7,33:40:87.04:1177,87,0	0/0:28,0:28:79.15:0,79,1653	0/0:38,0:39:96.33:0,96,2023	1/1:2,19:21:51.13:756,51,0	1/1:2,33:35:99:1507,99,0	1/1:3,20:23:47.87:736,48,0	1/1:0,6:6:18.06:276,18,0
chr10	35195976	.	GAA	G	741.36	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.891;DP=861;FS=2.697;HRun=2;HaplotypeScore=199.1987;InbreedingCoeff=0.9732;MQ=66.67;MQ0=6;MQRankSum=-4.738;QD=19.01;ReadPosRankSum=0.445;VQSLOD=1.5423;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,33:39:32.07:836,32,0	0/0:5,0:5:15.04:0,15,256	0/0:51,0:38:72.10:0,72,1334	0/0:56,1:38:92.71:0,93,1543	0/0:31,0:31:90.24:0,90,1745	0/0:20,0:20:33.93:0,34,220	0/0:33,0:33:35.93:0,36,370	0/0:24,0:23:52.54:0,53,505	0/0:40,0:40:99:0,117,2333	0/0:37,0:37:88.44:0,88,646	0/0:27,0:27:56.99:0,57,374	0/0:40,0:40:99:0,120,2389	0/0:29,0:29:58.13:0,58,300	0/0:25,0:25:34.20:0,34,309	0/0:39,0:39:99:0,103,744	0/0:21,0:21:31.12:0,31,294	0/0:33,0:33:99:0,99,1967	0/0:23,0:23:24.30:0,24,253	0/0:17,0:17:18.59:0,19,241	0/0:25,0:25:64.52:0,65,520	0/0:41,0:41:91.09:0,91,503	0/0:36,0:36:76.83:0,77,507	0/0:30,0:30:90.31:0,90,1753	0/0:41,0:41:99:0,123,2386	0/0:24,0:24:55.23:0,55,400	0/0:39,0:39:76.32:0,76,691	0/0:24,0:24:59.40:0,59,431	0/0:9,0:9:25.51:0,26,245
chr10	35196907	.	GA	G	5343.92	PASS	AB=0.672;AC=47;AF=0.839;AN=56;BaseQRankSum=-0.488;DP=572;FS=20.616;HRun=12;HaplotypeScore=94.3605;InbreedingCoeff=0.1339;MQ=46.89;MQ0=29;MQRankSum=-2.131;QD=10.67;ReadPosRankSum=3.532;VQSLOD=2.5698;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:18,26:45:79.55:603,80,0	1/1:3,6:9:14.87:116,15,0	0/0:29,0:3:0:0,0,0	0/0:40,0:6:2.04:0,2,7	1/1:6,22:27:16.36:300,16,0	1/1:13,8:22:39.08:304,39,0	1/1:7,8:14:32.85:255,33,0	1/1:9,11:20:24.91:174,25,0	1/1:9,6:11:17.89:140,18,0	1/1:11,9:24:17.09:227,17,0	1/1:6,4:12:16.95:121,17,0	0/1:7,12:18:28.10:136,0,28	0/1:7,7:14:9.16:196,0,9	1/1:11,8:17:20.87:160,21,0	1/1:16,8:22:41.75:324,42,0	0/1:11,6:16:2.59:154,0,3	1/1:8,17:25:41.82:324,42,0	1/1:13,2:13:14.83:107,15,0	1/1:9,11:19:37.34:282,37,0	0/1:19,9:31:12.27:155,0,12	1/1:4,4:8:11.93:93,12,0	1/1:14,6:20:34.84:260,35,0	0/1:9,14:22:3.68:159,0,4	1/1:4,7:11:17.67:139,18,0	1/1:10,4:13:20.54:161,21,0	1/1:11,8:18:23:184,23,0	1/1:15,8:23:32.22:249,32,0	1/1:1,1:2:2.99:23,3,0
chr10	35196927	.	G	GA	6958.23	PASS	AB=0.913;AC=36;AF=0.667;AN=54;BaseQRankSum=-5.824;DP=626;FS=18.522;HRun=11;HaplotypeScore=98.5986;InbreedingCoeff=0.6393;MQ=60.86;MQ0=8;MQRankSum=-3.221;QD=15.06;ReadPosRankSum=-4.196;VQSLOD=2.8359;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:42:92.47:0,92,719	0/0:12,0:12:31.42:0,31,240	0/1:25,0:12:22.17:22,0,112	0/1:27,0:10:39.52:40,0,73	0/0:31,0:29:44.64:0,45,348	1/1:17,3:21:36.38:350,36,0	1/1:10,8:17:36.07:366,36,0	1/1:15,21:34:54.10:541,54,0	0/0:18,0:14:23.71:0,24,174	1/1:10,17:27:45.09:457,45,0	1/1:6,8:14:26.74:258,27,0	0/0:20,0:19:41.80:0,42,321	1/1:9,5:14:21.04:213,21,0	1/1:12,9:21:15.04:305,15,0	1/1:21,12:31:54.90:727,55,0	0/1:8,8:16:7.58:273,0,8	0/0:26,0:26:56.69:0,57,441	1/1:11,11:20:42.07:420,42,0	1/1:10,18:28:32.43:480,32,0	1/1:17,16:34:53.85:578,54,0	1/1:7,3:11:1.74:101,2,0	1/1:9,14:24:60.07:591,60,0	0/1:19,0:18:14.83:15,0,176	0/0:12,0:11:19.43:0,19,145	1/1:7,7:13:9.32:259,9,0	1/1:9,17:28:52.77:510,53,0	1/1:18,10:27:34.59:452,35,0	./.
chr10	35197898	.	A	ACC	14500.01	PASS	AB=0.999;AC=26;AF=0.464;AN=56;BaseQRankSum=16.230;DP=1371;FS=16.511;HRun=4;HaplotypeScore=345.9580;InbreedingCoeff=0.1482;MQ=61.14;MQ0=4;MQRankSum=3.161;QD=15.26;ReadPosRankSum=6.588;VQSLOD=0.1532;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:63,0:63:20.14:906,0,20	0/0:14,0:14:39.09:0,39,487	0/0:45,0:29:47.45:0,47,681	0/0:75,0:45:73.09:0,73,798	0/0:44,0:44:99:0,120,1536	1/1:29,0:29:10:520,10,0	0/1:54,0:54:99:566,0,241	0/1:50,0:50:99:530,0,196	0/0:46,0:46:99:0,114,1391	0/1:88,0:88:99:1331,0,124	0/1:26,0:26:3.87:284,0,4	0/0:65,0:65:99:0,183,2278	1/1:61,1:61:19.60:1111,20,0	1/1:64,3:68:99:1380,135,0	0/1:66,0:66:99:910,0,199	1/1:60,0:60:99:1352,113,0	0/0:33,0:34:87.17:0,87,1088	1/1:19,0:20:11.25:294,11,0	0/1:22,0:22:24.51:316,0,25	1/1:34,0:34:28.52:540,29,0	0/1:123,1:121:99:1722,0,145	0/1:48,0:48:55.38:626,0,55	0/0:34,0:34:90.28:0,90,1181	0/0:62,0:62:99:0,152,1938	1/1:38,0:38:22.65:591,23,0	0/1:52,0:52:25.15:837,0,25	0/1:28,0:28:64.35:444,0,64	0/1:18,0:18:69.99:240,0,70
chr10	35197901	.	C	CCA	32888.33	PASS	AB=0.604;AC=37;AF=0.661;AN=56;BaseQRankSum=1.997;DP=1403;FS=12.602;HRun=0;HaplotypeScore=291.8407;InbreedingCoeff=0.9060;MQ=60.42;MQ0=6;MQRankSum=-0.180;QD=33.84;ReadPosRankSum=0.461;VQSLOD=2.6579;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:25,41:66:99:2076,135,0	0/0:15,0:15:36.10:0,36,442	0/0:49,0:29:22.76:0,23,492	0/0:78,0:44:47.65:0,48,657	0/0:46,0:46:99:0,114,1424	1/1:9,22:31:34.38:1080,34,0	1/1:19,32:52:90.25:1432,90,0	1/1:30,23:53:29.79:1476,30,0	0/0:47,0:47:99:0,111,1362	1/1:35,50:88:99:3346,214,0	1/1:8,18:26:42.13:668,42,0	0/0:64,0:64:99:0,165,2048	1/1:21,44:64:99:2345,128,0	1/1:20,49:69:99:2666,159,0	1/1:21,45:66:33.83:2065,34,0	1/1:7,55:62:99:2639,131,0	0/0:34,0:34:81.25:0,81,1021	1/1:6,13:20:49.10:665,49,0	1/1:10,14:22:48.11:743,48,0	1/1:12,23:35:80.94:1238,81,0	1/1:49,76:122:99:3985,160,0	1/1:17,32:49:99:1547,99,0	0/0:34,0:34:90.27:0,90,1120	0/0:64,0:64:99:0,150,1841	1/1:9,30:39:75.78:1297,76,0	1/1:17,37:54:99:2150,135,0	0/1:9,19:29:17.46:909,0,17	1/1:10,8:19:6.13:562,6,0
chr10	35197958	.	TAC	T	24486.08	PASS	AB=0.628;AC=37;AF=0.661;AN=56;BaseQRankSum=10.181;DP=1396;FS=1.716;HRun=0;HaplotypeScore=291.6213;InbreedingCoeff=0.9104;MQ=53.75;MQ0=31;MQRankSum=3.402;QD=25.56;ReadPosRankSum=-0.144;VQSLOD=4.4992;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:24,41:63:53.85:1337,54,0	0/0:11,0:11:30.10:0,30,510	0/0:59,0:17:24.69:0,25,382	0/0:52,0:14:28.12:0,28,493	0/0:42,0:42:93.30:0,93,1554	1/1:3,24:27:59.82:758,60,0	1/1:15,24:39:75.24:974,75,0	1/1:7,52:58:99:1869,147,0	0/0:62,0:60:99:0,144,2438	1/1:34,54:87:99:2597,205,0	1/1:8,21:29:28.13:440,28,0	0/0:80,0:80:99:0,220,3639	1/1:5,50:55:99:1558,120,0	1/1:12,55:68:99:1638,126,0	1/1:14,49:63:99:1830,144,0	1/1:10,54:64:99:1755,135,0	0/0:36,0:36:75.85:0,76,1261	0/1:11,16:26:33.16:631,0,33	1/1:9,13:19:39.09:476,39,0	1/1:3,33:36:81.15:1038,81,0	1/1:35,88:121:99:2796,168,0	1/1:10,44:54:96.17:1217,96,0	0/0:24,0:24:57.19:0,57,966	0/0:71,0:71:99:0,165,2737	1/1:8,33:42:40.33:650,40,0	1/1:7,39:45:99:1564,123,0	1/1:7,26:33:66.17:843,66,0	1/1:5,13:18:8.60:515,9,0
chr10	35198033	.	TGCACAC	T	666.37	PASS	AB=0.767;AC=2;AF=0.036;AN=56;BaseQRankSum=7.139;DP=1247;FS=0.803;HRun=0;HaplotypeScore=296.2429;InbreedingCoeff=-0.0403;MQ=55.28;MQ0=17;MQRankSum=-3.996;QD=17.54;ReadPosRankSum=-3.266;VQSLOD=2.0288;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:69,0:67:99:0,155,5452	0/0:13,0:13:39.13:0,39,1414	0/0:56,0:11:23.77:0,24,399	0/0:75,0:23:61.34:0,61,1258	0/0:30,0:30:3.01:0,3,65	0/0:26,0:26:66.21:0,66,2193	0/0:31,0:30:87.28:0,87,2865	0/0:58,0:58:99:0,171,4614	0/1:14,8:22:70.33:264,0,70	0/0:71,0:70:99:0,202,6786	0/0:21,0:21:57.19:0,57,2023	0/0:63,0:63:99:0,180,5741	0/0:46,0:46:99:0,117,3869	0/0:46,0:46:99:0,123,4324	0/0:67,0:67:99:0,186,5871	0/0:48,0:48:99:0,129,4179	0/1:12,4:16:24.23:492,0,24	0/0:29,0:30:78.43:0,78,2610	0/0:24,0:22:66.21:0,66,2090	0/0:28,0:28:81.23:0,81,2728	0/0:134,0:134:99:0,373,12212	0/0:47,0:47:99:0,120,3818	0/0:31,0:31:93.31:0,93,3325	0/0:55,0:55:99:0,153,5164	0/0:45,0:45:99:0,114,3862	0/0:42,0:42:99:0,126,4013	0/0:35,0:35:99:0,102,3321	0/0:12,0:12:36.12:0,36,1250
chr10	35198055	.	A	ATG	264.43	PASS	AB=0.790;AC=2;AF=0.036;AN=56;BaseQRankSum=6.920;DP=1290;FS=13.757;HRun=0;HaplotypeScore=193.3673;InbreedingCoeff=0.0290;MQ=53.45;MQ0=43;MQRankSum=-5.857;QD=6.01;ReadPosRankSum=-0.713;VQSLOD=2.3865;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:65,0:65:99:0,150,2522	0/0:15,0:15:45.15:0,45,730	0/0:76,0:9:24.07:0,24,315	0/0:81,0:14:33.02:0,33,453	0/0:30,0:30:3.01:0,3,49	0/0:23,0:23:66.23:0,66,1070	0/0:38,0:37:99:0,108,1723	0/0:49,0:49:99:0,141,2185	0/1:17,10:27:10.26:192,0,10	0/0:71,0:70:99:0,208,3295	0/0:23,0:23:69.24:0,69,1111	0/0:61,0:61:99:0,176,2763	0/0:44,0:44:99:0,120,1915	0/0:54,0:54:99:0,144,2299	0/0:61,0:61:99:0,172,2725	0/0:55,0:55:99:0,151,2431	0/1:14,3:17:81.42:161,0,81	0/0:34,0:34:93.28:0,93,1427	0/0:25,0:21:60.17:0,60,945	0/0:31,0:31:88.86:0,89,1407	0/0:154,0:151:99:0,418,6606	0/0:37,0:37:99:0,108,1750	0/0:33,0:33:96.33:0,96,1548	0/0:55,0:55:99:0,150,2432	0/0:43,0:43:99:0,120,1950	0/0:44,0:44:99:0,129,2065	0/0:32,0:32:96.33:0,96,1561	0/0:12,0:12:36.12:0,36,587
chr10	35198062	.	T	TCATA	1678.92	PASS	AB=1.000;AC=6;AF=0.107;AN=56;BaseQRankSum=5.404;DP=1281;FS=30.474;HRun=0;HaplotypeScore=232.0489;InbreedingCoeff=0.6369;MQ=53.94;MQ0=35;MQRankSum=-5.372;QD=15.13;ReadPosRankSum=-2.601;VQSLOD=1.7383;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:68,0:68:99:0,168,2934	0/0:17,0:17:51.11:0,51,883	0/0:73,0:13:28.27:0,28,378	0/0:69,0:15:28.76:0,29,531	0/1:32,0:32:20.58:155,0,21	0/0:23,0:23:66.17:0,66,1158	0/0:36,0:36:84.16:0,84,1773	0/0:49,0:48:99:0,134,2181	1/1:7,11:28:42.40:1081,42,0	0/0:68,0:67:99:0,193,3510	0/0:23,0:23:69.21:0,69,1252	0/0:66,0:66:99:0,167,3002	0/0:41,0:41:99:0,120,2181	0/0:55,0:55:99:0,144,2545	0/0:60,0:60:99:0,168,2975	0/0:55,0:55:99:0,144,2731	1/1:10,4:17:17.91:567,18,0	0/1:34,0:34:9.89:10,0,1385	0/0:23,0:20:48.09:0,48,812	0/0:32,0:32:87.28:0,87,1649	0/0:151,0:148:99:0,382,6743	0/0:36,0:36:96.22:0,96,1684	0/0:32,0:32:93.27:0,93,1678	0/0:53,0:53:99:0,141,2456	0/0:51,0:51:99:0,126,2292	0/0:44,0:44:99:0,132,2391	0/0:32,0:32:93.28:0,93,1710	0/0:12,0:12:33.06:0,33,568
chr10	35198063	.	C	CAT	525.21	PASS	AB=0.971;AC=6;AF=0.107;AN=56;BaseQRankSum=8.670;DP=1277;FS=22.076;HRun=0;HaplotypeScore=189.8355;InbreedingCoeff=0.6866;MQ=54.00;MQ0=34;MQRankSum=-3.746;QD=4.77;ReadPosRankSum=-0.971;VQSLOD=1.5031;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:63,1:64:99:0,171,2418	0/0:17,0:17:51.16:0,51,751	0/0:71,0:13:33.02:0,33,374	0/0:70,0:16:39.05:0,39,476	0/1:30,2:32:6.65:55,0,7	0/0:22,0:22:66.17:0,66,941	0/0:37,0:36:53.59:0,54,1389	0/0:48,0:47:99:0,135,1824	1/1:26,1:27:22.03:400,22,0	0/0:69,0:68:99:0,196,2849	0/0:24,0:24:69.21:0,69,1011	0/0:67,0:67:99:0,176,2479	0/0:40,0:40:99:0,120,1762	0/0:57,0:57:99:0,150,2093	0/0:60,0:60:99:0,168,2406	0/0:55,0:55:99:0,144,2172	1/1:16,0:16:15.80:194,16,0	0/1:35,0:35:6.43:6,0,1096	0/0:22,0:19:48.09:0,48,683	0/0:32,0:32:90.28:0,90,1334	0/0:150,0:147:99:0,397,5565	0/0:36,0:36:96.24:0,96,1390	0/0:32,0:32:96.26:0,96,1373	0/0:52,0:52:99:0,144,2004	0/0:50,0:50:99:0,135,1936	0/0:46,0:46:99:0,132,1951	0/0:32,0:32:96.27:0,96,1392	0/0:14,0:14:36.07:0,36,503
chr10	35199067	.	A	ATG	2944.42	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-11.874;DP=774;FS=0.000;HRun=0;HaplotypeScore=87.8382;InbreedingCoeff=0.9983;MQ=82.05;MQ0=0;MQRankSum=-2.995;QD=35.91;ReadPosRankSum=2.842;VQSLOD=5.9952;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:51.17:0,51,656	0/0:12,0:12:33.11:0,33,425	0/0:30,0:30:72.19:0,72,883	0/0:29,0:29:59.80:0,60,726	1/1:5,29:35:78.27:1316,78,0	0/0:39,0:39:99:0,105,1350	0/0:21,0:21:54.17:0,54,695	0/0:34,0:34:90.23:0,90,1111	1/1:9,24:34:72.25:1215,72,0	0/0:33,0:33:81.26:0,81,1042	0/0:29,0:29:81.25:0,81,1028	0/0:32,0:32:81.26:0,81,1042	0/0:27,0:27:78.24:0,78,987	0/0:29,0:29:84.26:0,84,1067	0/0:29,0:29:84.27:0,84,1081	0/0:45,1:47:75.61:0,76,1494	1/1:2,11:13:33.11:557,33,0	0/0:9,0:9:21.07:0,21,270	0/0:21,0:21:48.16:0,48,617	0/0:47,0:47:99:0,135,1723	0/0:31,0:30:81.25:0,81,1027	0/0:26,0:26:69.22:0,69,888	0/0:15,0:15:33.09:0,33,411	0/0:26,0:26:69.21:0,69,872	0/0:27,0:27:72.22:0,72,914	0/0:28,0:28:75.23:0,75,951	0/0:31,0:31:78.25:0,78,1004	0/0:20,0:20:57.19:0,57,733
chr10	35200182	.	TCA	T	797.91	PASS	AB=0.922;AC=18;AF=0.360;AN=50;BaseQRankSum=5.594;DP=613;FS=8.595;HRun=0;HaplotypeScore=80.4983;InbreedingCoeff=-0.0304;MQ=68.24;MQ0=10;MQRankSum=1.936;QD=2.29;ReadPosRankSum=1.588;VQSLOD=0.9991;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:38:1.59:9,0,2	./.	./.	./.	0/0:11,0:11:8.84:0,9,78	0/1:25,0:25:9.28:9,0,94	0/0:15,0:15:18.01:0,18,212	0/0:19,0:18:5.94:0,6,41	0/0:17,0:17:24.08:0,24,347	0/1:19,0:19:1.57:2,0,173	0/1:15,0:15:27.40:27,0,54	1/1:12,6:21:29.56:258,30,0	0/0:13,0:13:6.91:0,7,90	0/0:27,0:26:24.04:0,24,292	0/1:23,1:24:17.13:17,0,139	0/1:14,4:18:51.68:81,0,52	0/1:23,3:26:31.24:31,0,293	0/1:19,2:22:11.11:11,0,204	0/1:15,1:16:14.39:14,0,86	0/0:14,0:19:9.01:0,9,95	0/1:36,4:40:8.36:8,0,199	0/1:15,2:17:17.11:17,0,144	1/1:13,0:15:5.68:28,6,0	1/1:18,19:39:8.14:421,8,0	0/1:10,2:12:17.09:17,0,142	0/0:17,0:17:11.91:0,12,129	0/0:24,0:24:18.04:0,18,243	0/0:10,0:10:12.02:0,12,136
chr10	35203498	.	TATCTTCCTCACTTCCCTCTGG	T	587.33	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.309;DP=705;FS=1.973;HRun=0;HaplotypeScore=369.0398;InbreedingCoeff=0.9667;MQ=81.40;MQ0=0;MQRankSum=-3.411;QD=73.42;ReadPosRankSum=0.586;VQSLOD=2.5110;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,135,11269	1/1:2,6:8:12.04:673,12,0	0/0:34,0:33:57.16:0,57,2981	0/0:30,0:29:50.66:0,51,3202	0/0:31,0:31:72.25:0,72,6438	0/0:30,0:30:75.22:0,75,5998	0/0:23,0:23:59.55:0,60,4459	0/0:35,0:35:72.24:0,72,5157	0/0:30,0:30:63.22:0,63,5927	0/0:23,0:22:51.17:0,51,4377	0/0:22,0:22:39.12:0,39,3364	0/0:18,0:18:45.14:0,45,3970	0/0:21,0:21:51.16:0,51,4310	0/0:29,0:29:66.23:0,66,5992	0/0:25,0:25:48.16:0,48,4622	0/0:24,0:24:48.16:0,48,4049	0/0:19,0:19:42.11:0,42,3076	0/0:17,0:17:36.08:0,36,3071	0/0:24,0:24:27.09:0,27,2272	0/0:28,0:28:69.24:0,69,6220	0/0:36,0:36:75.24:0,75,6289	0/0:19,0:19:42.14:0,42,3941	0/0:20,0:20:48.16:0,48,4278	0/0:30,0:30:78.23:0,78,7057	0/0:14,0:14:36.12:0,36,3417	0/0:19,0:19:51.17:0,51,4496	0/0:29,0:29:51.16:0,51,4398	0/0:13,0:13:30.10:0,30,2826
chr10	35203725	.	CGTGTGTGTGTGTGTGT	C	897.18	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=4.921;DP=589;FS=3.014;HRun=0;HaplotypeScore=232.7738;InbreedingCoeff=0.5870;MQ=65.05;MQ0=17;MQRankSum=-1.149;QD=7.35;ReadPosRankSum=-0.375;VQSLOD=2.5618;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:36:2.10:0,2,274	0/0:7,0:7:5.98:0,6,47	0/0:26,0:20:5.96:0,6,45	0/0:26,0:19:6.01:0,6,68	0/0:5,9:14:0.46:0,0,1	0/0:10,0:10:12.01:0,12,176	0/0:25,0:30:16.10:0,16,381	0/0:27,0:26:11.98:0,12,123	1/1:13,18:32:9.41:279,9,0	0/0:11,0:15:28.79:0,29,426	0/0:10,0:8:6.02:0,6,88	0/1:24,0:23:14.40:14,0,69	0/0:13,0:17:26.64:0,27,471	0/0:19,0:18:15.05:0,15,316	0/0:25,0:28:36.56:0,37,619	1/1:11,11:22:11.91:376,12,0	1/1:14,16:31:11.71:335,12,0	0/0:24,0:25:32.98:0,33,647	0/0:15,0:15:9.02:0,9,143	0/0:12,0:12:6.01:0,6,68	0/0:40,0:37:51.09:0,51,914	0/0:21,0:22:33.08:0,33,614	1/1:13,0:12:5.37:37,5,0	0/0:24,0:23:5.13:0,5,239	0/0:13,0:13:21.04:0,21,458	0/0:21,0:20:39.12:0,39,837	0/0:15,0:22:24.45:0,24,315	0/0:4,0:4:9.03:0,9,135
chr10	35203760	.	G	GTCTGTGTC	964.88	PASS	AB=0.857;AC=7;AF=0.135;AN=52;BaseQRankSum=-0.366;DP=638;FS=14.066;HRun=0;HaplotypeScore=182.2244;InbreedingCoeff=0.4568;MQ=48.35;MQ0=48;MQRankSum=2.024;QD=6.79;ReadPosRankSum=1.749;VQSLOD=1.4428;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:45:23.72:0,24,367	0/0:5,0:3:2.98:0,3,22	./.	./.	0/0:18,0:16:11.86:0,12,126	0/0:15,0:12:21.02:0,21,265	0/0:34,0:33:32.44:0,32,591	0/0:27,0:21:51.11:0,51,370	0/1:30,0:29:0.19:0,0,295	0/0:20,0:16:47.97:0,48,590	0/0:14,0:12:27.05:0,27,353	0/1:9,23:34:45.64:152,0,46	0/0:20,0:19:36.08:0,36,539	0/0:19,0:16:33.10:0,33,474	0/0:28,0:28:43.73:0,44,516	0/0:28,0:25:18.22:0,18,422	0/1:32,0:32:25.07:25,0,281	0/0:34,0:33:27.36:0,27,896	0/0:9,0:8:23.80:0,24,284	0/0:8,0:6:18.03:0,18,217	0/0:55,0:46:92.76:0,93,1176	0/0:33,0:30:39.94:0,40,468	1/1:6,0:13:5.58:163,6,0	1/1:29,0:27:22.85:750,23,0	0/0:19,0:19:33.56:0,34,522	0/0:29,0:23:55.86:0,56,656	0/0:22,0:21:32.92:0,33,415	0/0:6,0:6:17.58:0,18,194
chr10	35205423	.	GAAGAGAGAGAGA	G	487.44	PASS	AB=0.808;AC=9;AF=0.161;AN=56;BaseQRankSum=3.903;DP=598;FS=3.382;HRun=0;HaplotypeScore=199.8131;InbreedingCoeff=0.4408;MQ=63.71;MQ0=11;MQRankSum=-0.808;QD=3.66;ReadPosRankSum=0.053;VQSLOD=2.8682;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:83.96:0,84,1379	0/1:8,0:8:38.92:39,0,78	0/0:15,0:11:29.99:0,30,298	0/0:22,0:13:12.86:0,13,198	1/1:1,20:20:14.58:148,15,0	0/0:14,0:14:35.86:0,36,384	0/0:30,0:30:50.59:0,51,507	0/0:30,0:30:83.79:0,84,891	1/1:0,24:25:8.99:233,9,0	0/0:23,0:22:59.98:0,60,1181	0/0:19,0:20:42.51:0,43,624	0/0:21,0:21:35.65:0,36,590	0/0:25,0:25:49.52:0,50,365	0/1:11,0:11:6.24:6,0,186	0/0:23,0:22:40.46:0,40,274	0/1:2,25:27:63.91:88,0,64	0/1:2,23:24:0.89:112,0,1	0/0:8,0:7:16.13:0,16,132	0/1:16,0:14:0.55:1,0,322	0/0:18,0:18:27.39:0,27,274	0/0:23,0:22:53.90:0,54,590	0/0:32,0:32:80.04:0,80,757	0/0:11,0:11:29.21:0,29,449	0/0:25,0:24:49.50:0,49,1582	0/0:17,0:17:32.35:0,32,301	0/0:19,0:19:24.02:0,24,443	0/0:23,0:23:65.05:0,65,567	0/0:18,0:17:34.10:0,34,348
chr10	35205424	.	AAGAGAGAG	A	2115.41	PASS	AB=1.000;AC=37;AF=0.685;AN=54;BaseQRankSum=4.734;DP=593;FS=26.662;HRun=0;HaplotypeScore=159.4542;InbreedingCoeff=0.4252;MQ=62.82;MQ0=11;MQRankSum=-3.733;QD=5.17;ReadPosRankSum=-1.546;VQSLOD=0.7712;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:48:1.52:0,2,293	1/1:5,3:8:6.02:101,6,0	./.	0/0:21,0:12:0.47:0,0,1	0/1:22,0:21:0.05:0,0,1	1/1:13,0:13:2.90:16,3,0	1/1:24,6:30:9.03:192,9,0	1/1:29,0:29:2.30:8,2,0	1/1:25,0:25:6.02:112,6,0	0/0:20,0:22:27.05:0,27,420	0/0:15,0:20:9.01:0,9,125	0/0:12,0:21:6.02:0,6,113	1/1:16,8:24:12.04:295,12,0	1/1:10,0:11:5.96:130,6,0	1/1:11,12:22:21.03:520,21,0	0/1:27,0:27:11.97:29,0,12	1/1:25,0:24:2.15:54,2,0	0/1:9,0:8:38.92:39,0,69	1/1:14,0:15:7.69:82,8,0	1/1:10,7:17:8.94:115,9,0	1/1:20,0:19:8.70:97,9,0	1/1:22,7:30:0.88:95,1,0	0/0:11,0:11:9.02:0,9,167	0/0:16,0:24:36.09:0,36,657	1/1:10,7:17:5.38:83,5,0	1/1:18,0:21:5.86:82,6,0	1/1:21,2:23:2.59:74,3,0	1/1:13,5:17:6.02:150,6,0
chr10	35206863	.	GTCTA	G	13166.60	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=18.426;DP=577;FS=8.309;HRun=0;HaplotypeScore=194.0607;InbreedingCoeff=0.9945;MQ=63.55;MQ0=0;MQRankSum=-16.121;QD=35.88;ReadPosRankSum=0.129;VQSLOD=4.1294;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,20:21:54.17:692,54,0	1/1:0,9:9:27.08:377,27,0	0/0:10,0:10:21.07:0,21,529	0/0:11,0:11:16.07:0,16,484	0/0:31,0:31:93.32:0,93,2674	1/1:1,16:17:51.16:673,51,0	1/1:2,24:26:72.22:910,72,0	1/1:1,16:17:48.16:665,48,0	0/0:36,0:36:99:0,102,2940	1/1:0,21:21:63.19:882,63,0	1/1:1,16:17:36.06:451,36,0	0/0:27,0:27:78.25:0,78,2170	1/1:2,20:22:60.15:780,60,0	1/1:0,23:24:67.81:852,68,0	1/1:0,26:26:75.24:987,75,0	0/0:30,0:30:90.30:0,90,2544	0/0:24,0:24:72.25:0,72,2076	1/1:1,16:17:45.15:683,45,0	1/1:1,13:14:39.12:546,39,0	1/1:0,23:24:61.97:693,62,0	1/1:3,11:14:27.07:331,27,0	1/1:2,19:22:63.05:722,63,0	0/0:15,0:15:42.14:0,42,1216	0/0:26,0:26:69.24:0,69,1995	1/1:2,12:14:42.10:498,42,0	1/1:0,28:28:81.04:1081,81,0	1/1:1,27:29:84.22:1127,84,0	1/1:0,5:5:15.05:217,15,0
chr10	35206868	.	G	GGA	13874.92	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=18.554;DP=630;FS=10.457;HRun=0;HaplotypeScore=191.2733;InbreedingCoeff=0.9743;MQ=63.14;MQ0=0;MQRankSum=-16.845;QD=33.76;ReadPosRankSum=-0.182;VQSLOD=5.3522;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,20:26:66.20:828,66,0	1/1:3,9:12:33.09:453,33,0	0/0:13,0:13:26.75:0,27,362	0/0:10,0:10:4.17:0,4,259	0/0:34,0:34:99:0,102,1657	1/1:1,16:18:54.16:674,54,0	1/1:6,24:30:81.24:955,81,0	1/1:5,16:21:60.18:800,60,0	0/0:38,0:38:99:0,105,1677	1/1:4,21:25:75.21:997,75,0	1/1:2,16:18:30.09:383,30,0	0/0:25,0:25:72.23:0,72,1149	1/1:2,20:22:60.19:774,60,0	1/1:1,23:25:60.76:830,61,0	1/1:4,26:30:81.25:1045,81,0	0/0:32,0:32:96.31:0,96,1534	0/0:25,0:25:72.25:0,72,1168	1/1:1,16:17:45.15:651,45,0	1/1:2,13:15:42.14:602,42,0	1/1:5,23:28:61.40:708,61,0	1/1:7,11:18:30.09:374,30,0	1/1:4,19:23:60.06:723,60,0	0/0:14,0:14:42.14:0,42,685	0/0:28,0:28:69.24:0,69,1124	1/1:8,12:20:54.13:710,54,0	1/1:3,24:27:78.25:1094,78,0	1/1:2,27:30:81.26:1068,81,0	1/1:1,5:6:15.05:207,15,0
chr10	35206969	.	A	AATACC	44037.85	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-2.531;DP=665;FS=16.732;HRun=0;HaplotypeScore=133.6259;InbreedingCoeff=0.9818;MQ=79.85;MQ0=0;MQRankSum=-11.423;QD=72.31;ReadPosRankSum=4.184;VQSLOD=5.7359;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,19:24:60.21:1748,60,0	1/1:3,12:15:39.13:1137,39,0	0/0:25,0:25:60.20:0,60,1223	0/0:31,0:31:80.45:0,80,1624	1/1:2,20:22:48.64:1475,49,0	1/1:2,15:18:45.09:1414,45,0	1/1:5,11:17:39.13:1152,39,0	1/1:10,12:26:66.17:1762,66,0	1/1:9,20:30:87.24:2432,87,0	1/1:9,17:27:78.24:2291,78,0	1/1:4,15:19:39.09:1113,39,0	1/1:3,21:27:75.08:2209,75,0	1/1:3,18:28:63.22:1859,63,0	1/1:7,13:22:51.13:1427,51,0	1/1:3,31:37:99:3031,99,0	1/1:6,28:36:93.23:2706,93,0	1/1:0,31:30:78.27:2472,78,0	1/1:2,11:13:30.10:950,30,0	1/1:9,9:22:54.06:1267,54,0	1/1:2,14:18:42.14:1286,42,0	1/1:6,11:18:20.85:581,21,0	1/1:3,13:19:42.14:1311,42,0	1/1:5,12:17:36.12:1092,36,0	1/1:4,28:33:72.25:2239,72,0	1/1:5,16:21:48.16:1410,48,0	1/1:3,31:37:99:3103,111,0	1/1:3,24:27:72.25:2194,72,0	1/1:0,4:5:12.04:380,12,0
chr10	35207708	.	TA	T	1170.87	PASS	AB=0.945;AC=10;AF=0.179;AN=56;BaseQRankSum=-4.767;DP=603;FS=21.227;HRun=13;HaplotypeScore=115.7494;InbreedingCoeff=0.4438;MQ=69.12;MQ0=0;MQRankSum=-0.488;QD=8.19;ReadPosRankSum=3.502;VQSLOD=0.9305;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,1:49:86.57:0,87,948	0/0:12,1:14:4.95:0,5,186	0/1:11,0:8:1.57:2,0,58	0/1:14,0:13:29.36:29,0,35	0/1:18,2:20:32.95:33,0,210	0/0:17,1:18:17.14:0,17,324	0/0:14,3:19:0.89:0,1,290	0/0:21,1:25:28.14:0,28,440	0/0:29,1:30:24.53:0,25,326	0/0:25,0:25:51.04:0,51,481	0/1:15,3:19:30.01:30,0,192	1/1:5,16:22:46.73:334,47,0	0/0:12,0:15:23.86:0,24,214	0/0:14,0:14:29.98:0,30,272	0/0:17,2:19:14.15:0,14,299	0/0:18,2:20:9.42:0,9,262	0/0:23,2:26:10.39:0,10,283	0/0:21,1:22:48.54:0,49,462	0/0:18,3:21:4.24:0,4,357	0/0:19,0:19:42.05:0,42,399	0/0:20,0:20:45.05:0,45,428	0/0:22,2:24:19.23:0,19,497	1/1:3,18:21:47.58:350,48,0	1/1:6,24:34:79.72:549,80,0	0/0:20,3:23:13.29:0,13,445	0/0:22,2:24:20.12:0,20,339	0/0:21,0:22:49.46:0,49,480	0/0:11,0:11:24.03:0,24,228
chr10	35208787	.	G	GT	2894.87	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-1.604;DP=576;FS=3.475;HRun=9;HaplotypeScore=81.2380;InbreedingCoeff=0.9872;MQ=68.87;MQ0=0;MQRankSum=0.140;QD=19.43;ReadPosRankSum=1.241;VQSLOD=4.0400;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,21:25:51.14:564,51,0	0/0:11,0:11:29.99:0,30,260	0/0:15,0:14:16.82:0,17,165	0/0:13,0:13:18.36:0,18,117	1/1:1,27:28:76.38:818,76,0	0/0:23,0:23:62.95:0,63,539	0/0:16,0:16:38.97:0,39,335	0/0:39,1:40:65.78:0,66,795	1/1:3,14:17:11.29:342,11,0	0/0:20,0:20:47.97:0,48,414	0/0:23,0:23:62.99:0,63,547	1/1:2,0:12:25.57:128,26,0	0/0:17,0:17:41.97:0,42,362	0/0:17,0:17:33.64:0,34,301	0/0:16,0:16:47.99:0,48,417	1/1:2,16:18:19.07:438,19,0	1/1:3,19:22:26.23:476,26,0	0/0:21,0:21:53.99:0,54,469	0/0:26,0:26:68.44:0,68,573	0/0:28,0:28:77.98:0,78,677	0/0:11,0:11:32.98:0,33,284	0/0:13,0:13:29.97:0,30,255	1/1:1,2:18:45.75:252,46,0	1/1:1,0:8:17:84,17,0	0/0:30,0:30:86.73:0,87,741	0/0:34,1:35:65.82:0,66,793	0/0:33,0:31:89.97:0,90,781	0/0:18,0:18:26.94:0,27,234
chr10	35209209	.	CG	C	939.85	PASS	AB=0.950;AC=7;AF=0.125;AN=56;BaseQRankSum=-6.349;DP=601;FS=1.278;HRun=10;HaplotypeScore=138.3745;InbreedingCoeff=0.8346;MQ=79.47;MQ0=0;MQRankSum=-2.235;QD=12.05;ReadPosRankSum=2.508;VQSLOD=2.4067;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:63.29:0,63,283	0/0:6,0:6:16.47:0,16,74	0/1:17,1:19:7.77:8,0,204	0/0:20,0:19:22.99:0,23,175	0/0:19,0:26:30.70:0,31,194	0/0:15,0:14:30.25:0,30,136	0/0:20,0:20:46.66:0,47,209	0/0:29,0:29:58.36:0,58,272	0/0:14,0:15:12.03:0,12,65	0/0:28,0:27:57.77:0,58,260	0/0:29,0:29:55:0,55,247	1/1:8,13:21:47.91:407,48,0	0/0:23,0:23:49.40:0,49,220	0/0:12,0:12:30.19:0,30,135	0/0:34,0:34:68.61:0,69,307	0/0:13,0:13:11.68:0,12,68	0/0:25,0:30:49.67:0,50,319	0/0:15,0:15:41.39:0,41,192	0/0:16,0:16:27.50:0,27,123	0/0:31,0:31:77.11:0,77,350	0/0:27,0:27:68.61:0,69,307	0/0:22,0:22:52.15:0,52,233	1/1:5,19:25:53.73:438,54,0	1/1:4,9:13:26.99:234,27,0	0/0:19,0:19:46.66:0,47,209	0/0:27,0:27:66.07:0,66,301	0/0:21,0:21:49.58:0,50,225	0/0:14,0:14:30.19:0,30,135
chr10	35209213	.	G	GGC	17905.40	PASS	AB=1.000;AC=41;AF=0.732;AN=56;BaseQRankSum=-13.650;DP=586;FS=1.334;HRun=0;HaplotypeScore=88.2526;InbreedingCoeff=0.7529;MQ=77.73;MQ0=0;MQRankSum=-0.572;QD=38.59;ReadPosRankSum=4.112;VQSLOD=6.6683;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,29:32:69.22:1187,69,0	1/1:0,6:6:18.06:310,18,0	0/0:20,0:20:47.46:0,47,533	0/0:16,0:15:38.83:0,39,423	0/0:25,0:25:42.86:0,43,279	1/1:0,13:12:33.11:554,33,0	1/1:1,21:22:51.17:880,51,0	1/1:1,28:29:81.13:1203,81,0	0/1:9,0:9:8.16:8,0,29	1/1:2,24:26:75.15:1189,75,0	1/1:1,27:28:63.15:1046,63,0	0/0:21,0:21:56.84:0,57,462	1/1:0,21:21:54.18:932,54,0	1/1:0,12:12:33.11:570,33,0	1/1:1,33:34:75.24:1295,75,0	0/1:11,0:11:7.98:8,0,29	0/1:25,0:25:75.01:75,0,144	1/1:2,14:16:41.13:724,41,0	1/1:1,14:16:42.05:609,42,0	1/1:2,32:34:86.90:1423,87,0	1/1:0,26:26:75.26:1295,75,0	1/1:1,21:22:57.19:985,57,0	0/0:26,0:26:71.85:0,72,613	0/0:14,0:14:35.90:0,36,290	1/1:1,18:20:51.17:880,51,0	1/1:0,25:25:75.12:1245,75,0	1/1:1,20:22:54.17:920,54,0	1/1:0,14:14:33.11:569,33,0
chr10	35209271	.	TAC	T	5472.12	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=3.390;DP=616;FS=4.532;HRun=0;HaplotypeScore=100.2690;InbreedingCoeff=0.9458;MQ=89.03;MQ0=0;MQRankSum=-4.495;QD=40.84;ReadPosRankSum=3.368;VQSLOD=6.9728;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,99,1854	0/0:7,0:7:21.07:0,21,405	0/0:22,0:22:66.09:0,66,1148	0/0:25,0:25:67.47:0,67,1212	1/1:1,15:16:42.13:620,42,0	0/0:18,0:18:51.17:0,51,985	0/0:20,0:20:54.16:0,54,991	0/0:25,0:25:75.25:0,75,1410	1/1:0,16:16:42.14:643,42,0	0/0:31,0:31:93.28:0,93,1711	0/0:27,0:27:72.25:0,72,1370	1/1:1,29:30:84.29:1284,84,0	0/0:23,0:23:66.23:0,66,1254	0/0:19,0:19:54.17:0,54,990	0/0:24,0:24:63.22:0,63,1216	1/1:0,18:18:45.15:678,45,0	1/1:0,23:23:66.22:1010,66,0	0/0:16,1:17:2.20:0,2,786	0/0:19,0:19:57.20:0,57,1099	0/0:18,0:18:48.16:0,48,904	0/0:50,0:50:99:0,141,2690	0/0:24,0:24:69.22:0,69,1295	1/1:1,12:13:33.11:505,33,0	1/1:0,18:18:48.16:733,48,0	0/0:31,0:30:84.29:0,84,1605	0/0:23,0:23:69.24:0,69,1317	0/0:20,0:20:54.17:0,54,1008	0/0:2,0:2:6.02:0,6,116
chr10	35211398	.	A	AC	20063.93	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-8.832;DP=546;FS=0.000;HRun=1;HaplotypeScore=47.6294;InbreedingCoeff=0.9584;MQ=71.51;MQ0=0;MQRankSum=-8.085;QD=39.97;ReadPosRankSum=6.143;VQSLOD=4.5342;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,52:53:99:2112,141,0	1/1:0,7:7:21.07:315,21,0	0/0:27,0:27:72.19:0,72,898	0/0:17,0:17:48.03:0,48,557	1/1:0,23:23:60.20:899,60,0	1/1:1,14:15:39.13:584,39,0	1/1:1,20:21:57.19:854,57,0	1/1:1,19:20:60.20:897,60,0	1/1:1,12:13:7.62:421,8,0	1/1:2,15:17:48.13:694,48,0	1/1:1,12:13:36.12:539,36,0	1/1:1,12:13:36.12:540,36,0	1/1:0,14:14:39.13:584,39,0	1/1:1,13:14:39.13:584,39,0	1/1:0,23:23:63.21:944,63,0	1/1:0,15:14:42.14:629,42,0	1/1:1,32:33:93.32:1394,93,0	1/1:0,19:19:51.17:764,51,0	1/1:4,19:23:60.15:845,60,0	1/1:0,17:17:51.10:737,51,0	1/1:2,30:32:75.25:1124,75,0	1/1:0,10:10:27.09:405,27,0	1/1:1,11:12:27.09:405,27,0	1/1:0,24:24:63.21:944,63,0	1/1:1,17:18:48.16:719,48,0	1/1:1,19:20:57.19:851,57,0	1/1:2,17:19:51.15:742,51,0	1/1:0,14:14:36.12:539,36,0
chr10	35213185	.	T	TAA	10849.72	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-14.443;DP=588;FS=1.717;HRun=11;HaplotypeScore=100.7190;InbreedingCoeff=0.9562;MQ=60.78;MQ0=4;MQRankSum=0.305;QD=26.14;ReadPosRankSum=-4.604;VQSLOD=3.6809;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,4:34:54.49:541,54,0	1/1:1,3:5:8.99:107,9,0	0/0:12,0:11:8.90:0,9,69	0/0:13,0:13:19.47:0,19,205	0/0:4,0:18:41.35:0,41,194	1/1:3,0:20:3.85:73,4,0	1/1:1,9:11:24.08:348,24,0	1/1:3,22:27:72.15:924,72,0	0/0:3,0:20:46.02:0,46,197	1/1:3,26:29:78.19:1025,78,0	1/1:6,21:27:33.47:733,33,0	0/0:4,0:14:30.02:0,30,128	1/1:4,13:22:47.75:580,48,0	1/1:1,16:17:36.12:521,36,0	1/1:7,16:26:40.60:503,41,0	0/0:1,0:24:60.26:0,60,260	0/0:2,0:30:63.29:0,63,274	1/1:6,23:29:51.60:715,52,0	1/1:4,15:20:48.13:654,48,0	1/1:5,22:29:54.17:748,54,0	1/1:3,7:12:25.55:286,26,0	1/1:3,12:16:33.06:433,33,0	0/0:0,0:20:52.14:0,52,225	0/0:6,0:19:35.65:0,36,154	1/1:2,21:24:50.93:667,51,0	1/1:3,22:28:71.61:905,72,0	1/1:2,20:23:47.65:660,48,0	1/1:0,11:12:32.58:424,33,0
chr10	35213261	.	TA	T	3787.58	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=13.620;DP=458;FS=14.740;HRun=2;HaplotypeScore=77.0613;InbreedingCoeff=0.9682;MQ=54.33;MQ0=3;MQRankSum=-2.596;QD=34.75;ReadPosRankSum=2.549;VQSLOD=2.6251;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:66.18:0,66,962	0/0:6,0:6:12.04:0,12,180	0/0:2,0:2:6.02:0,6,90	0/0:4,0:4:12.04:0,12,176	1/1:1,22:23:66.04:761,66,0	0/0:22,0:22:63.13:0,63,888	0/0:18,0:18:54.18:0,54,784	0/0:22,0:22:66.21:0,66,968	1/1:1,11:12:36.10:432,36,0	0/0:30,0:30:87.29:0,87,1301	0/0:21,0:20:60.20:0,60,890	1/1:1,8:9:27.07:317,27,0	0/0:15,0:15:39.13:0,39,584	0/0:13,0:13:36.12:0,36,538	0/0:20,0:20:48.12:0,48,694	1/1:3,21:24:72.15:848,72,0	1/1:1,13:13:39.12:483,39,0	0/0:17,0:17:30.04:0,30,402	0/0:15,0:15:45.10:0,45,646	0/0:14,0:14:39.10:0,39,561	0/0:7,0:6:18.06:0,18,269	0/0:15,0:15:45.15:0,45,666	1/1:1,17:18:54.07:633,54,0	1/1:1,8:9:27:313,27,0	0/0:20,0:19:39.13:0,39,584	0/0:27,0:27:81.27:0,81,1191	0/0:17,0:17:45.11:0,45,629	0/0:20,0:20:60.20:0,60,897
chr10	35224626	.	A	ATCTC	5273.51	PASS	AB=0.771;AC=36;AF=0.667;AN=54;BaseQRankSum=-7.465;DP=713;FS=0.000;HRun=0;HaplotypeScore=131.5872;InbreedingCoeff=0.0715;MQ=66.98;MQ0=8;MQRankSum=-0.586;QD=9.77;ReadPosRankSum=-1.227;VQSLOD=3.6740;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:18,5:51:15.05:318,15,0	1/1:5,3:9:3.01:52,3,0	./.	0/0:52,0:29:2.33:0,2,30	0/1:14,0:23:7.82:8,0,119	0/1:11,14:29:20.41:477,0,20	0/1:12,7:24:20.83:349,0,21	0/1:31,0:31:32.21:109,0,32	0/0:13,0:26:38.98:0,39,351	1/1:8,8:16:23.35:381,23,0	0/1:10,9:24:38.99:75,0,39	1/1:23,0:23:24.04:360,24,0	0/1:10,8:24:26.96:230,0,27	1/1:8,4:13:8.43:94,8,0	1/1:14,9:31:23.34:389,23,0	0/0:10,0:22:36.04:0,36,335	0/0:15,0:32:51.05:0,51,471	0/1:9,0:9:35.22:99,0,35	1/1:17,7:25:18:217,18,0	1/1:10,10:22:14.79:297,15,0	0/1:16,4:21:23.42:387,0,23	1/1:20,1:22:20.78:303,21,0	1/1:9,0:20:3.01:52,3,0	1/1:23,1:28:8.73:145,9,0	1/1:7,1:15:5.75:83,6,0	0/1:13,10:26:12.11:411,0,12	0/1:16,9:31:73.74:213,0,74	1/1:14,5:18:11.78:226,12,0
chr10	35224854	.	C	CCTCA	33236.50	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-16.073;DP=750;FS=25.943;HRun=0;HaplotypeScore=104.6715;InbreedingCoeff=0.9999;MQ=82.14;MQ0=1;MQRankSum=-5.998;QD=62.83;ReadPosRankSum=1.243;VQSLOD=4.1306;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,28:30:75.26:1979,75,0	1/1:0,12:12:33.11:870,33,0	0/0:22,0:22:51.16:0,51,879	0/0:27,0:27:72.23:0,72,1246	0/0:32,0:32:87.29:0,87,1557	1/1:7,28:35:81.28:2137,81,0	1/1:4,24:30:63.22:1657,63,0	1/1:19,18:38:72.23:1751,72,0	0/0:22,0:22:60.21:0,60,1104	1/1:6,25:32:84.29:2143,84,0	1/1:2,17:20:51.18:1345,51,0	0/0:22,0:22:66.23:0,66,1215	1/1:2,22:25:69.24:1819,69,0	1/1:7,14:22:48.16:1264,48,0	1/1:1,28:29:81.28:2137,81,0	0/0:23,0:23:63.22:0,63,1159	0/0:21,0:21:54.19:0,54,994	1/1:7,17:24:54.19:1425,54,0	1/1:2,10:13:36.11:878,36,0	1/1:3,26:30:75.26:1976,75,0	1/1:10,43:52:99:2927,111,0	1/1:3,21:26:63.22:1661,63,0	0/0:21,0:21:51.16:0,51,908	0/0:31,0:31:87.30:0,87,1599	1/1:5,13:18:36.12:949,36,0	1/1:2,37:40:99:3073,117,0	1/1:4,25:30:78.27:2057,78,0	1/1:2,19:22:45.15:1188,45,0
chr10	35225137	.	CT	C	6104.44	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=11.727;DP=739;FS=6.438;HRun=1;HaplotypeScore=71.6728;InbreedingCoeff=0.9991;MQ=87.71;MQ0=0;MQRankSum=-4.563;QD=33.73;ReadPosRankSum=6.433;VQSLOD=4.1271;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:90.30:0,90,1362	0/0:10,0:10:30.10:0,30,459	0/0:22,0:22:65.88:0,66,847	0/0:33,0:33:92.28:0,92,1231	1/1:1,27:28:78.19:1060,78,0	0/0:42,0:42:99:0,126,1836	0/0:28,0:28:84.27:0,84,1258	0/0:39,0:39:99:0,117,1740	1/1:0,35:35:81.27:1130,81,0	0/0:35,0:35:99:0,102,1543	0/0:21,0:21:54.16:0,54,782	1/1:0,28:28:60.20:837,60,0	0/0:20,0:20:57.18:0,57,842	0/0:25,0:25:75.21:0,75,1078	0/0:32,0:32:96.27:0,96,1385	1/1:0,24:24:57.19:795,57,0	1/1:0,18:18:42.12:567,42,0	0/0:11,0:11:33.07:0,33,477	0/0:22,0:22:66.22:0,66,1007	0/0:32,0:32:96.08:0,96,1381	0/0:42,0:42:99:0,123,1819	0/0:25,0:25:75.25:0,75,1141	1/1:0,23:23:56.88:794,57,0	1/1:0,25:25:66.22:920,66,0	0/0:21,0:21:63.13:0,63,928	0/0:24,0:24:72.22:0,72,1059	0/0:35,0:35:99:0,102,1517	0/0:7,0:7:20.99:0,21,269
chr10	35226480	.	GA	G	5551.25	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=14.324;DP=733;FS=1.859;HRun=5;HaplotypeScore=68.3845;InbreedingCoeff=0.9998;MQ=84.16;MQ0=0;MQRankSum=-2.330;QD=32.09;ReadPosRankSum=3.578;VQSLOD=5.5335;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,129,1748	0/0:15,0:15:42.13:0,42,557	0/0:23,0:23:60.19:0,60,796	0/0:20,0:20:44.49:0,44,554	1/1:0,27:27:81.23:919,81,0	0/0:31,0:31:93.31:0,93,1272	0/0:25,0:25:69.21:0,69,916	0/0:43,0:43:99:0,123,1670	1/1:0,37:37:99:1225,108,0	0/0:32,0:32:90.29:0,90,1219	0/0:24,0:24:66.21:0,66,886	1/1:0,24:24:66.19:749,66,0	0/0:17,0:17:48.14:0,48,639	0/0:31,0:31:87.29:0,87,1188	0/0:31,0:31:87.29:0,87,1190	1/1:1,16:17:48.14:545,48,0	1/1:0,26:26:72.21:817,72,0	0/0:17,0:17:51.15:0,51,680	0/0:21,0:21:63.21:0,63,861	0/0:38,0:38:99:0,114,1543	0/0:22,0:22:66.22:0,66,903	0/0:27,0:27:78.23:0,78,1022	1/1:1,20:21:58.72:651,59,0	1/1:0,21:21:57.16:647,57,0	0/0:25,0:25:72.24:0,72,985	0/0:29,0:29:78.26:0,78,1067	0/0:35,0:35:99:0,102,1363	0/0:9,0:9:27.09:0,27,369
chr10	35234071	.	TG	T	3909.34	PASS	AB=0.788;AC=44;AF=0.786;AN=56;BaseQRankSum=-8.002;DP=431;FS=8.824;HRun=11;HaplotypeScore=65.6682;InbreedingCoeff=0.5637;MQ=79.13;MQ0=0;MQRankSum=-1.442;QD=11.33;ReadPosRankSum=1.332;VQSLOD=2.5749;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:16,24:40:41.84:338,42,0	1/1:2,2:4:3:25,3,0	0/1:18,0:17:3.62:4,0,132	0/0:17,0:14:0:0,0,102	0/0:14,0:14:16.87:0,17,141	1/1:7,7:14:17.93:147,18,0	1/1:3,13:16:1.16:208,1,0	0/1:5,6:12:7.75:104,0,8	0/0:14,0:14:13.94:0,14,152	1/1:8,12:20:35.02:260,35,0	1/1:3,6:9:14.94:117,15,0	1/1:2,7:9:14.98:123,15,0	1/1:1,7:8:14.21:115,14,0	1/1:1,12:13:0.17:105,0,0	1/1:6,13:19:35.94:295,36,0	0/0:15,0:15:23.03:0,23,148	0/0:25,1:26:1.06:0,1,161	1/1:1,12:13:38.95:319,39,0	1/1:5,8:14:22.96:176,23,0	1/1:4,10:14:18.49:130,18,0	1/1:2,17:19:29.96:246,30,0	1/1:5,11:16:23.69:179,24,0	1/1:4,9:13:17.92:148,18,0	1/1:3,6:9:11.99:98,12,0	1/1:5,9:14:5.94:68,6,0	1/1:6,15:21:44.87:361,45,0	1/1:8,14:22:32.87:268,33,0	1/1:2,4:6:8.98:74,9,0
chr10	35234247	.	AACACACACACACACACACAC	A	820.67	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=4.999;DP=618;FS=0.000;HRun=0;HaplotypeScore=270.8951;InbreedingCoeff=0.7303;MQ=62.43;MQ0=18;MQRankSum=-4.189;QD=10.94;ReadPosRankSum=-1.017;VQSLOD=1.3997;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:47:41.80:0,42,1581	0/0:4,0:4:6.02:0,6,412	0/0:36,0:21:3.01:0,3,44	0/0:33,0:22:3.01:0,3,44	0/0:20,0:19:27.09:0,27,1519	0/0:16,0:16:21.54:0,22,1557	0/0:21,0:19:30.10:0,30,2163	0/0:29,0:27:36.12:0,36,1343	0/0:22,0:21:36.12:0,36,1859	0/0:17,0:17:24.08:0,24,1535	0/0:10,0:13:12.04:0,12,734	1/1:8,10:19:8.75:459,9,0	0/0:18,0:19:28.01:0,28,1720	0/0:6,0:6:9.03:0,9,522	0/0:18,0:27:39.13:0,39,2513	0/0:9,0:14:18.53:0,19,1090	0/0:9,0:18:26.85:0,27,1905	0/0:23,0:23:48.08:0,48,3285	0/0:13,0:12:17.63:0,18,711	0/0:13,0:12:6.49:0,6,537	0/0:50,0:50:61.55:0,62,3168	0/0:19,0:19:36.12:0,36,2758	1/1:15,11:27:8.98:285,9,0	1/1:15,14:27:9.31:200,9,0	0/0:22,0:22:27.56:0,28,1810	0/0:24,0:24:50.32:0,50,2872	0/0:17,0:22:19.30:0,19,1079	0/0:10,0:10:15.05:0,15,826
chr10	35235043	.	T	TA	1406.51	PASS	AB=0.974;AC=12;AF=0.214;AN=56;BaseQRankSum=-2.677;DP=523;FS=4.816;HRun=12;HaplotypeScore=76.5035;InbreedingCoeff=0.5301;MQ=64.60;MQ0=0;MQRankSum=0.051;QD=9.70;ReadPosRankSum=-1.396;VQSLOD=2.7767;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:23.36:0,23,317	0/0:6,0:7:13.96:0,14,93	0/1:17,0:12:20.03:20,0,73	0/1:10,0:8:30.02:30,0,34	1/1:5,20:26:47.93:438,48,0	0/0:22,0:22:32.70:0,33,240	0/0:12,0:12:32.79:0,33,241	0/0:31,1:35:59.40:0,59,411	1/1:1,15:16:39.06:379,39,0	0/0:17,0:17:32.71:0,33,237	0/1:14,2:17:13.52:14,0,166	0/0:2,0:20:34.63:0,35,100	0/0:12,0:12:20.82:0,21,151	0/0:16,0:17:40.80:0,41,290	0/0:18,0:19:40.65:0,41,285	1/1:4,14:18:36.06:351,36,0	1/1:8,16:24:1.26:336,1,0	0/0:23,0:22:43.71:0,44,312	0/0:20,0:21:27.06:0,27,172	0/0:18,1:19:9.51:0,10,229	0/0:5,0:6:13.96:0,14,93	0/0:17,0:17:35.78:0,36,263	0/0:5,0:16:18.97:0,19,62	0/0:2,0:25:42.77:0,43,124	0/0:22,0:22:15.19:0,15,183	0/0:20,0:22:13.59:0,14,245	0/1:15,0:15:1.47:1,0,206	0/0:12,0:12:14.81:0,15,109
chr10	35236221	.	TA	T	4061.61	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=11.929;DP=728;FS=2.443;HRun=9;HaplotypeScore=68.2242;InbreedingCoeff=0.9796;MQ=55.06;MQ0=18;MQRankSum=0.939;QD=21.95;ReadPosRankSum=1.473;VQSLOD=4.5674;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:60,0:60:99:0,162,1844	0/0:7,0:7:21.02:0,21,219	0/0:23,0:7:21.06:0,21,240	0/0:21,0:4:8.05:0,8,76	1/1:5,29:31:72.04:658,72,0	0/0:31,0:31:78.21:0,78,883	0/0:32,0:32:75.21:0,75,855	0/0:45,0:39:99:0,99,1112	1/1:1,21:22:63.03:577,63,0	0/0:29,0:27:72.17:0,72,816	0/0:24,0:24:62.82:0,63,689	1/1:2,18:20:54.03:494,54,0	0/0:17,0:17:39.12:0,39,450	0/0:19,0:19:45.12:0,45,510	0/0:30,0:30:82.20:0,82,897	1/1:1,23:24:63.03:577,63,0	1/1:2,30:32:74.96:686,75,0	0/0:30,1:31:44.75:0,45,761	0/0:19,1:17:11.61:0,12,374	0/0:26,0:26:63.19:0,63,727	0/0:27,1:28:53.76:0,54,862	0/0:17,0:15:39.12:0,39,450	1/1:4,16:20:39.01:356,39,0	1/1:4,29:33:78:714,78,0	0/0:15,0:14:39.12:0,39,450	0/0:26,0:26:69.20:0,69,789	0/0:26,0:26:63.12:0,63,696	0/0:13,0:13:33.10:0,33,381
chr10	35237575	.	A	AGAT	2619.61	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-9.298;DP=653;FS=3.912;HRun=0;HaplotypeScore=98.3011;InbreedingCoeff=0.9903;MQ=91.16;MQ0=0;MQRankSum=0.006;QD=35.89;ReadPosRankSum=2.809;VQSLOD=4.4765;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:42:99:0,126,2037	0/0:11,0:11:30.10:0,30,495	0/0:24,0:24:53.98:0,54,836	0/0:32,0:32:84.12:0,84,1267	1/1:1,16:17:24.08:544,24,0	0/0:24,0:24:60.19:0,60,965	0/0:31,0:31:87.28:0,87,1407	0/0:30,0:30:81.24:0,81,1277	1/1:2,19:21:42.14:951,42,0	0/0:21,0:21:60.20:0,60,973	0/0:13,0:13:32.89:0,33,524	0/0:23,0:23:63.22:0,63,1045	0/0:21,0:21:60.19:0,60,969	0/0:25,0:25:69.24:0,69,1134	0/0:22,0:22:63.22:0,63,1050	1/1:2,9:11:15.05:332,15,0	1/1:3,19:24:42.14:951,42,0	0/0:15,0:15:42.14:0,42,700	0/0:27,0:27:75.26:0,75,1241	0/0:23,0:23:63.20:0,63,1016	0/0:35,0:34:99:0,102,1673	0/0:29,0:29:66.21:0,66,1074	0/0:16,0:16:39.13:0,39,649	0/0:25,0:25:63.21:0,63,1033	0/0:15,0:15:42.13:0,42,669	0/0:25,0:25:69.24:0,69,1141	0/0:42,0:42:99:0,117,1902	0/0:8,0:8:15.05:0,15,246
chr10	35238430	.	G	GC	2098.85	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-8.912;DP=623;FS=16.837;HRun=2;HaplotypeScore=62.2972;InbreedingCoeff=0.9988;MQ=75.61;MQ0=0;MQRankSum=-2.401;QD=36.82;ReadPosRankSum=4.301;VQSLOD=2.1963;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,150,1810	0/0:8,0:8:24.08:0,24,297	0/0:21,0:21:57.11:0,57,656	0/0:25,0:24:40.88:0,41,635	0/0:23,0:22:66.21:0,66,812	0/0:24,0:24:60.19:0,60,743	0/0:18,0:18:54.10:0,54,628	0/0:34,0:34:84.26:0,84,1040	0/0:18,0:18:51.12:0,51,614	0/0:18,0:18:51.15:0,51,613	0/0:12,0:12:33.09:0,33,397	1/1:0,20:20:54.18:776,54,0	0/0:17,0:17:48.15:0,48,595	0/0:23,0:23:69.17:0,69,816	0/0:27,0:27:81.23:0,81,980	0/0:24,0:24:69.20:0,69,832	0/0:32,0:32:96.30:0,96,1189	0/0:27,0:27:75.22:0,75,917	0/0:18,0:18:48.15:0,48,594	0/0:18,0:18:51.15:0,51,619	0/0:28,0:28:81.24:0,81,989	0/0:19,0:19:54.13:0,54,652	1/1:1,18:19:48.01:689,48,0	1/1:0,18:18:54.18:776,54,0	0/0:23,0:23:60.19:0,60,742	0/0:22,0:22:63.16:0,63,763	0/0:23,0:23:66.14:0,66,786	0/0:12,0:12:27.08:0,27,334
chr10	35240057	.	TA	T	6480.48	PASS	AB=0.808;AC=50;AF=0.893;AN=56;BaseQRankSum=-0.187;DP=568;FS=31.361;HRun=12;HaplotypeScore=86.7635;InbreedingCoeff=0.5352;MQ=52.04;MQ0=16;MQRankSum=3.474;QD=12.41;ReadPosRankSum=1.755;VQSLOD=2.5419;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,2:29:68.65:0,69,650	1/1:2,6:7:10.05:129,10,0	0/0:15,0:3:4.37:0,4,58	0/1:13,0:3:8.58:9,0,22	1/1:4,0:20:24.65:83,25,0	1/1:5,13:17:32.67:255,33,0	1/1:2,12:15:34.90:261,35,0	1/1:11,18:26:54.84:406,55,0	1/1:3,0:16:16.57:61,17,0	1/1:11,21:32:33.88:405,34,0	1/1:5,25:31:70.69:535,71,0	1/1:4,0:9:10.64:29,11,0	1/1:0,18:17:44.83:348,45,0	1/1:1,9:11:19.96:145,20,0	1/1:4,24:28:65.74:511,66,0	1/1:5,0:21:32.59:96,33,0	1/1:5,0:23:24.55:85,25,0	1/1:5,20:24:55.76:418,56,0	1/1:7,15:21:32.68:326,33,0	1/1:5,26:31:40.88:498,41,0	1/1:3,3:6:0.90:59,1,0	1/1:1,5:6:11.90:88,12,0	0/1:6,0:15:1.01:28,0,1	1/1:2,0:6:6.07:19,6,0	1/1:4,19:23:52.84:401,53,0	1/1:4,28:32:64.61:603,65,0	1/1:10,24:34:48.04:429,48,0	1/1:8,13:21:32.86:255,33,0
chr10	35240070	.	GAAAGA	G	993.77	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=6.852;DP=573;FS=22.110;HRun=0;HaplotypeScore=143.8387;InbreedingCoeff=0.9577;MQ=55.28;MQ0=11;MQRankSum=-7.182;QD=38.22;ReadPosRankSum=0.776;VQSLOD=1.8058;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:31:78.25:0,78,2002	0/0:11,0:10:27.09:0,27,701	0/0:22,0:6:15.52:0,16,362	0/0:18,0:6:12.01:0,12,230	0/0:23,0:21:57.19:0,57,948	0/0:20,0:19:42.14:0,42,1100	0/0:17,0:17:45.15:0,45,1070	0/0:34,0:33:93.32:0,93,2204	0/0:16,0:16:42.14:0,42,631	0/0:29,0:29:66.13:0,66,1559	0/0:31,0:31:84.26:0,84,1998	1/1:1,6:7:21.07:390,21,0	0/0:19,0:18:51.18:0,51,1267	0/0:12,0:12:27.09:0,27,675	0/0:26,0:26:60.21:0,60,1496	0/0:24,0:24:69.23:0,69,1093	0/0:23,0:23:60.20:0,60,917	0/0:24,0:23:57.18:0,57,1320	0/0:21,0:20:51.16:0,51,1228	0/0:33,0:33:84.29:0,84,2169	0/0:5,0:5:12.04:0,12,303	0/0:8,0:8:21.07:0,21,518	1/1:3,10:12:30.10:562,30,0	1/1:2,4:6:11.71:180,12,0	0/0:23,0:22:60.21:0,60,1515	0/0:33,0:33:80.29:0,80,1941	0/0:29,0:29:69.24:0,69,1699	0/0:13,0:13:33.11:0,33,863
chr10	35240072	.	AAG	A	182.02	PASS	AB=1.000;AC=8;AF=0.143;AN=56;BaseQRankSum=8.491;DP=579;FS=10.688;HRun=0;HaplotypeScore=116.2121;InbreedingCoeff=0.7308;MQ=55.41;MQ0=10;MQRankSum=-7.123;QD=3.71;ReadPosRankSum=-1.619;VQSLOD=1.8406;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,1:33:87.17:0,87,1534	0/0:10,1:10:26.98:0,27,500	0/0:22,0:6:16.82:0,17,242	0/1:18,0:6:1.09:1,0,115	0/0:24,0:22:43.91:0,44,822	0/0:17,1:18:29.05:0,29,791	0/0:17,0:17:48.16:0,48,829	0/0:34,0:33:96.21:0,96,1652	0/0:15,1:16:42.08:0,42,561	0/0:29,0:29:52.38:0,52,1230	0/0:33,0:33:90.29:0,90,1572	1/1:7,0:7:20.15:108,20,0	0/0:19,0:18:51.17:0,51,919	0/0:13,0:13:27.09:0,27,471	0/0:27,0:27:71.91:0,72,1229	0/0:25,0:25:72.22:0,72,1020	0/0:23,0:23:60.20:0,60,829	0/0:24,0:23:63.17:0,63,1035	0/0:21,0:20:53.75:0,54,980	0/0:32,1:33:77.83:0,78,1606	0/1:5,0:5:5.87:6,0,208	0/0:8,0:8:21.07:0,21,384	1/1:13,0:12:31.54:164,32,0	1/1:6,0:6:4.32:39,4,0	0/0:24,0:23:63.21:0,63,1128	0/0:31,1:32:61.44:0,61,1462	0/0:27,2:28:36.91:0,37,1187	0/0:13,0:13:33.11:0,33,594
chr10	35240785	.	T	TC	7461.72	PASS	AB=0.532;AC=13;AF=0.232;AN=56;BaseQRankSum=-13.962;DP=645;FS=5.768;HRun=0;HaplotypeScore=60.0726;InbreedingCoeff=0.8998;MQ=77.00;MQ0=0;MQRankSum=-1.823;QD=42.16;ReadPosRankSum=3.642;VQSLOD=5.4786;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:63.21:0,63,880	0/0:11,0:11:33.09:0,33,443	0/0:20,0:20:54.09:0,54,682	0/0:15,0:16:42.51:0,43,500	1/1:0,21:21:60.20:958,60,0	0/0:32,0:32:96.32:0,96,1342	0/0:17,0:17:51.17:0,51,713	0/0:31,0:31:84.22:0,84,1121	1/1:0,23:23:63.21:1007,63,0	0/0:31,0:31:87.28:0,87,1190	0/0:20,0:20:51.17:0,51,711	1/1:1,24:25:69.24:1103,69,0	0/0:20,0:20:57.18:0,57,782	0/0:28,0:28:81.26:0,81,1116	0/0:28,0:28:84.28:0,84,1174	1/1:0,29:29:84.29:1343,84,0	1/1:1,29:30:81.28:1294,81,0	0/0:27,0:26:75.25:0,75,1048	0/0:18,0:18:51.17:0,51,712	0/0:26,0:26:78.26:0,78,1090	0/0:14,0:14:36.12:0,36,503	0/0:14,0:14:39.13:0,39,545	1/1:0,24:24:60.20:959,60,0	0/1:3,22:25:23.68:798,0,24	0/0:22,0:22:63.21:0,63,881	0/0:27,0:27:81.27:0,81,1132	0/0:36,0:36:99:0,108,1510	0/0:8,0:8:24.04:0,24,296
chr10	35241004	.	CT	C	1748.39	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=10.434;DP=527;FS=0.000;HRun=4;HaplotypeScore=63.0508;InbreedingCoeff=0.9826;MQ=63.15;MQ0=1;MQRankSum=2.778;QD=18.21;ReadPosRankSum=3.836;VQSLOD=2.8607;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:80.63:0,81,1062	0/0:9,0:9:24.08:0,24,343	0/0:14,0:13:33.06:0,33,430	0/0:5,0:3:9.03:0,9,128	1/1:5,26:31:78.27:684,78,0	0/0:16,0:16:48.16:0,48,690	0/0:10,0:10:30.10:0,30,430	0/0:30,0:30:84.24:0,84,1133	1/1:1,12:13:29.94:254,30,0	0/0:24,0:23:60.19:0,60,837	0/0:24,0:24:72.24:0,72,1034	0/0:21,0:21:50.42:0,50,393	0/0:18,0:18:54.17:0,54,750	0/0:13,0:13:39.13:0,39,547	0/0:9,0:9:27.09:0,27,387	1/1:2,20:22:49.61:405,50,0	1/1:2,28:30:66.83:566,67,0	0/0:17,0:17:42.14:0,42,595	0/0:25,0:25:72.22:0,72,1000	0/0:25,0:25:69.22:0,69,975	0/0:14,0:14:39.13:0,39,560	0/0:12,0:12:36.12:0,36,516	0/0:19,0:19:53.83:0,54,461	0/0:14,0:13:32.85:0,33,260	0/0:18,0:18:51.17:0,51,734	0/0:19,0:19:54.18:0,54,777	0/0:31,0:31:81.27:0,81,1159	0/0:15,0:15:45.15:0,45,641
chr10	35241008	.	CT	C	2864.23	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=13.213;DP=536;FS=1.259;HRun=10;HaplotypeScore=59.4727;InbreedingCoeff=0.9596;MQ=62.02;MQ0=2;MQRankSum=3.110;QD=18.84;ReadPosRankSum=3.732;VQSLOD=4.3884;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:57.40:0,57,791	0/0:9,0:9:15.04:0,15,166	0/0:13,0:12:12.02:0,12,123	0/0:5,0:3:3.01:0,3,33	1/1:32,1:33:81.81:688,82,0	0/0:17,0:17:45.12:0,45,498	0/0:13,0:13:33.05:0,33,346	0/0:30,0:30:75.20:0,75,829	1/1:13,0:13:30.45:257,30,0	0/0:20,1:20:25.05:0,25,492	0/0:25,0:25:69.17:0,69,753	1/1:0,22:22:47.99:417,48,0	0/0:18,0:19:29.11:0,29,482	0/0:13,0:13:30.07:0,30,323	0/0:10,0:10:27.03:0,27,278	1/1:22,0:22:48.85:412,49,0	1/1:30,0:30:69.81:585,70,0	0/0:17,0:17:42.09:0,42,454	0/0:22,0:22:57.14:0,57,623	0/0:24,0:24:66.18:0,66,729	0/0:14,0:14:39.09:0,39,423	0/0:13,0:13:33.09:0,33,365	1/1:2,16:18:47.99:417,48,0	1/1:1,13:13:32.99:287,33,0	0/0:18,0:18:48.12:0,48,525	0/0:21,0:21:54.01:0,54,579	0/0:31,0:31:78.15:0,78,828	0/0:16,0:15:42.11:0,42,465
chr10	35243149	.	CT	C	6671.77	PASS	AB=0.559;AC=34;AF=0.607;AN=56;BaseQRankSum=-7.291;DP=516;FS=14.792;HRun=10;HaplotypeScore=74.9039;InbreedingCoeff=0.8143;MQ=66.88;MQ0=0;MQRankSum=5.319;QD=19.86;ReadPosRankSum=3.297;VQSLOD=4.4848;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:31:75.05:0,75,795	1/1:1,9:10:23.99:208,24,0	0/0:20,0:12:23.95:0,24,222	0/0:19,1:14:16.85:0,17,153	0/0:6,0:22:21.96:0,22,126	1/1:2,12:14:32.99:287,33,0	1/1:3,14:17:38.97:339,39,0	0/1:9,22:31:26.90:453,0,27	0/0:4,0:14:8.33:0,8,54	1/1:4,20:24:56.96:495,57,0	1/1:2,19:21:56.98:495,57,0	0/0:7,0:8:16.51:0,17,82	1/1:0,17:17:41.99:365,42,0	1/1:3,22:25:65.98:573,66,0	1/1:2,24:26:59.99:521,60,0	0/0:6,0:11:24.95:0,25,122	0/0:7,1:28:12.17:0,12,149	1/1:3,14:17:32.99:286,33,0	1/1:4,12:16:35.97:307,36,0	1/1:3,18:21:11.79:331,12,0	1/1:1,4:5:12:104,12,0	1/1:4,10:14:29.98:259,30,0	0/0:6,0:14:25.86:0,26,155	0/0:4,0:7:7.36:0,7,38	1/1:1,19:20:59.79:508,60,0	1/1:3,24:27:43.74:565,44,0	1/1:4,19:22:50.99:443,51,0	0/1:1,7:8:12.18:135,0,12
chr10	35243166	.	C	CTTTTT	653.58	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=3.216;DP=532;FS=3.513;HRun=8;HaplotypeScore=137.6780;InbreedingCoeff=0.4813;MQ=70.66;MQ0=0;MQRankSum=-4.457;QD=6.05;ReadPosRankSum=-3.190;VQSLOD=-0.5842;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:69.13:0,69,1090	0/0:9,0:9:21.03:0,21,326	0/1:22,0:14:21.89:22,0,105	0/0:23,0:16:1.57:0,2,58	0/0:28,0:27:1.52:0,2,195	0/0:15,0:15:30.07:0,30,487	0/0:14,0:14:42.09:0,42,632	0/0:24,0:24:40.64:0,41,620	0/0:15,0:15:5.90:0,6,97	0/0:18,0:18:36.06:0,36,616	0/0:19,0:19:45.01:0,45,736	1/1:12,0:10:21.88:287,22,0	0/0:19,0:19:48.09:0,48,778	0/0:28,0:28:69.16:0,69,1095	0/0:23,0:23:54.13:0,54,892	0/1:15,0:15:12.15:12,0,222	0/1:28,0:28:36.03:36,0,429	0/0:16,0:16:36.01:0,36,514	0/0:18,0:18:47.93:0,48,659	0/0:23,0:23:51.04:0,51,752	0/0:5,0:5:12.02:0,12,177	0/0:13,0:13:39.08:0,39,536	1/1:8,9:22:12.51:303,13,0	1/1:7,1:7:9.02:142,9,0	0/0:27,0:27:75.15:0,75,1116	0/0:28,0:29:77.66:0,78,1187	0/0:21,0:20:51.16:0,51,819	0/0:9,0:9:18.04:0,18,295
chr10	35244850	.	C	CATTGGGG	13410.01	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-0.616;DP=710;FS=1.170;HRun=0;HaplotypeScore=166.6427;InbreedingCoeff=0.9912;MQ=73.45;MQ0=0;MQRankSum=-16.911;QD=72.88;ReadPosRankSum=0.332;VQSLOD=4.9683;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,150,3882	0/0:7,0:7:15.02:0,15,304	0/0:16,0:16:35.46:0,35,772	0/0:17,0:17:31.80:0,32,703	1/1:13,23:39:69.06:2286,69,0	0/0:21,0:21:63.18:0,63,1509	0/0:34,0:34:99:0,102,2645	0/0:25,0:25:66.23:0,66,1623	1/1:8,21:33:75.26:2852,75,0	0/0:27,0:27:78.27:0,78,1969	0/0:26,0:26:75.24:0,75,1819	1/1:3,17:23:51.18:2011,51,0	0/0:26,0:26:78.27:0,78,1993	0/0:29,0:29:87.30:0,87,2281	0/0:26,0:26:75.24:0,75,1905	1/1:7,17:25:66.23:2465,66,0	1/1:6,9:18:33.11:1178,33,0	0/0:25,0:25:66.20:0,66,1666	0/0:22,0:22:66.20:0,66,1563	0/0:25,0:25:69.22:0,69,1693	0/0:32,0:32:96.28:0,96,2258	0/0:28,0:28:78.27:0,78,2016	1/1:9,13:23:50.84:1674,51,0	1/1:4,15:23:27.05:943,27,0	0/0:29,0:29:84.29:0,84,2210	0/0:26,0:26:78.27:0,78,1997	0/0:29,0:29:87.28:0,87,2239	0/0:6,0:6:12.04:0,12,279
chr10	35245293	.	TACACACAC	T	3837.64	PASS	AB=0.806;AC=31;AF=0.574;AN=54;BaseQRankSum=-1.547;DP=681;FS=24.714;HRun=0;HaplotypeScore=207.3790;InbreedingCoeff=0.5618;MQ=58.92;MQ0=11;MQRankSum=-0.716;QD=9.55;ReadPosRankSum=1.013;VQSLOD=1.1564;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:49:54.15:0,54,1056	1/1:6,2:8:8.80:111,9,0	0/0:28,0:16:6.02:0,6,103	0/0:26,0:15:9.03:0,9,152	0/0:18,0:18:36.10:0,36,948	1/1:12,2:16:24.05:346,24,0	1/1:30,0:31:1.43:370,1,0	1/1:29,0:29:11.51:118,12,0	0/0:32,0:34:48.14:0,48,1308	1/1:18,9:26:24.01:388,24,0	1/1:5,2:8:3.01:54,3,0	0/0:28,0:27:24.14:0,24,680	1/1:14,12:26:18.50:399,18,0	0/1:10,8:22:0.18:0,0,1	1/1:10,14:24:6.38:75,6,0	0/1:19,0:24:45.52:46,0,357	0/0:27,0:27:48.16:0,48,1453	1/1:14,8:24:3.58:212,4,0	1/1:6,5:11:17.99:322,18,0	1/1:20,2:23:12.39:379,12,0	0/1:56,0:56:45.94:352,0,46	0/1:13,8:21:0:1,0,0	0/0:13,0:13:8.36:0,8,239	0/0:36,0:36:17.73:0,18,526	./.	1/1:20,9:28:26.87:514,27,0	1/1:11,6:17:6.02:103,6,0	0/1:4,0:4:15.94:49,0,16
chr10	35245327	.	C	CATGT	1365.46	PASS	AB=0.941;AC=16;AF=0.286;AN=56;BaseQRankSum=6.990;DP=816;FS=52.139;HRun=0;HaplotypeScore=194.6222;InbreedingCoeff=-0.3970;MQ=49.04;MQ0=33;MQRankSum=-1.081;QD=2.82;ReadPosRankSum=2.887;VQSLOD=1.1226;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:93.17:0,93,1456	0/1:8,0:8:21.36:21,0,202	0/0:41,0:8:9.02:0,9,122	0/0:46,0:12:20.64:0,21,375	0/1:15,10:25:41.79:42,0,579	0/1:20,0:20:52.02:52,0,420	0/1:32,0:32:99:168,0,730	0/1:24,0:19:3.70:4,0,307	0/1:43,0:42:99:621,0,578	0/1:33,0:31:56.10:56,0,847	0/1:9,0:8:14.62:15,0,52	0/0:32,0:31:40.24:0,40,577	0/0:30,0:30:15.68:0,16,687	0/0:28,0:28:41.81:0,42,789	0/1:27,1:28:67.29:67,0,606	0/1:14,15:32:17.62:18,0,259	0/1:25,13:38:67.45:67,0,797	0/1:34,0:32:32.60:33,0,768	0/1:26,0:20:23.43:23,0,470	0/1:23,0:22:99:126,0,290	0/1:78,0:76:99:128,0,1570	0/0:22,0:22:20.47:0,20,406	0/0:14,0:14:29.96:0,30,551	0/0:38,0:38:39:0,39,651	0/0:14,0:14:27.09:0,27,531	0/1:29,0:28:81.62:82,0,884	0/0:14,0:14:27.08:0,27,488	0/0:5,0:3:8.85:0,9,94
chr10	35245737	.	CT	C	2557.76	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=12.750;DP=591;FS=0.477;HRun=1;HaplotypeScore=60.2007;InbreedingCoeff=0.8321;MQ=59.95;MQ0=4;MQRankSum=0.982;QD=31.97;ReadPosRankSum=1.437;VQSLOD=3.3103;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,160,2542	0/0:6,0:6:18.06:0,18,288	0/1:13,0:6:22.02:22,0,153	0/0:15,0:9:18.05:0,18,248	0/0:25,0:25:72.24:0,72,1137	0/0:20,0:20:60.19:0,60,935	0/0:20,0:20:60.20:0,60,957	0/0:39,0:39:99:0,117,1870	0/0:28,0:28:84.29:0,84,1343	0/0:25,0:25:75.26:0,75,1197	0/0:10,0:10:27.08:0,27,408	1/1:0,19:19:57.19:797,57,0	0/0:22,0:22:63.21:0,63,1004	0/0:20,0:20:57.18:0,57,886	0/0:21,0:21:63.21:0,63,1007	0/0:10,0:10:30.10:0,30,480	0/0:22,0:22:66.23:0,66,1054	0/0:16,0:16:48.15:0,48,743	0/0:23,0:22:66.18:0,66,1023	0/0:14,0:14:39.13:0,39,618	0/0:46,0:46:99:0,138,2200	0/0:9,0:9:24.07:0,24,360	1/1:0,17:17:48.16:671,48,0	1/1:0,31:31:87.29:1217,87,0	0/0:18,0:18:54.18:0,54,862	0/0:24,0:24:72.25:0,72,1151	0/0:15,0:15:45.13:0,45,673	0/0:10,0:10:30.10:0,30,480
chr10	35248541	.	TG	T	892.40	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=7.087;DP=461;FS=2.309;HRun=4;HaplotypeScore=50.1309;InbreedingCoeff=0.9740;MQ=83.77;MQ0=1;MQRankSum=-2.346;QD=25.50;ReadPosRankSum=1.110;VQSLOD=2.4104;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:66.17:0,66,861	0/0:4,0:4:12.04:0,12,168	0/0:40,0:32:39.65:0,40,771	0/0:26,0:17:21.67:0,22,297	0/0:24,0:24:66.20:0,66,889	0/0:19,0:19:54.17:0,54,735	0/0:11,0:11:33.11:0,33,460	0/0:24,0:24:45.14:0,45,613	0/0:11,0:11:33.11:0,33,461	0/0:23,0:23:69.16:0,69,939	0/0:24,0:24:72.21:0,72,967	1/1:0,9:9:24.07:288,24,0	0/0:5,0:5:15.05:0,15,210	0/0:10,0:10:30.08:0,30,401	0/0:11,0:11:33.11:0,33,449	0/0:10,0:10:30.10:0,30,417	0/0:22,0:22:63.18:0,63,841	0/0:12,0:12:36.11:0,36,488	0/0:23,0:23:66.11:0,66,831	0/0:25,0:25:68.26:0,68,915	0/0:5,0:5:15.03:0,15,192	0/0:9,0:9:27.07:0,27,359	1/1:1,15:16:39.12:459,39,0	1/1:0,10:10:24.07:287,24,0	0/0:17,0:17:44.99:0,45,636	0/0:18,0:18:51.15:0,51,679	0/0:21,0:20:63.19:0,63,861	0/0:9,0:9:27.09:0,27,377
chr10	35248675	.	CCT	C	463.78	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=6.304;DP=437;FS=19.015;HRun=0;HaplotypeScore=55.5102;InbreedingCoeff=0.9681;MQ=83.96;MQ0=0;MQRankSum=-2.492;QD=28.99;ReadPosRankSum=0.970;VQSLOD=2.6997;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:54.14:0,54,1005	0/0:6,0:6:18.06:0,18,348	0/0:20,0:20:54.18:0,54,998	0/0:18,0:18:50.48:0,50,919	0/0:19,0:19:57.20:0,57,1068	0/0:20,0:20:60.21:0,60,1148	0/0:16,0:16:48.16:0,48,927	0/0:30,0:30:84.29:0,84,1609	0/0:16,0:16:48.16:0,48,926	0/0:13,0:13:39.13:0,39,753	0/0:14,0:14:42.14:0,42,811	1/1:0,5:5:12.04:184,12,0	0/0:19,0:19:57.20:0,57,1092	0/0:18,0:18:54.19:0,54,1042	0/0:25,0:25:75.24:0,75,1416	0/0:16,0:16:48.16:0,48,915	0/0:19,0:19:57.17:0,57,1063	0/0:13,0:13:39.09:0,39,715	0/0:16,0:16:48.15:0,48,889	0/0:14,0:14:42.14:0,42,810	0/0:20,0:20:60.19:0,60,1114	0/0:14,0:14:42.13:0,42,765	1/1:0,5:5:12.04:183,12,0	1/1:0,6:6:15.05:229,15,0	0/0:9,0:9:27.09:0,27,522	0/0:14,0:14:42.14:0,42,811	0/0:25,0:25:69.01:0,69,1299	0/0:9,0:9:27.09:0,27,521
chr10	35251833	.	A	AGAGAAG	6021.42	PASS	AB=1.000;AC=32;AF=0.571;AN=56;BaseQRankSum=6.799;DP=559;FS=0.526;HRun=0;HaplotypeScore=118.2499;InbreedingCoeff=0.6078;MQ=41.32;MQ0=33;MQRankSum=-7.589;QD=24.38;ReadPosRankSum=-3.150;VQSLOD=4.1571;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:25:53.77:0,54,991	1/1:6,0:6:12.04:292,12,0	0/0:72,0:14:35.83:0,36,640	0/0:96,0:24:52.93:0,53,804	0/0:22,0:21:51.17:0,51,1133	1/1:9,0:9:18:383,18,0	1/1:16,0:15:5.07:387,5,0	0/1:13,0:9:4.95:188,0,5	0/0:18,0:17:36.10:0,36,644	1/1:21,0:21:11.15:866,11,0	1/1:21,0:20:13.17:416,13,0	0/0:8,0:8:9:0,9,119	0/1:22,0:21:23.50:206,0,24	0/1:13,0:13:5.99:86,0,6	1/1:13,0:13:12.04:227,12,0	0/0:10,0:10:23.74:0,24,454	0/0:25,0:25:56.37:0,56,1068	1/1:6,0:6:3.01:82,3,0	1/1:11,0:7:9.58:224,10,0	1/1:18,0:17:27.08:480,27,0	1/1:20,0:20:15.05:309,15,0	1/1:3,7:10:12.04:207,12,0	0/0:10,0:10:0.75:0,1,331	0/0:24,0:23:20.20:0,20,716	1/1:10,0:9:6.02:133,6,0	1/1:19,0:19:47.84:967,48,0	0/1:13,0:11:11.51:340,0,12	1/1:5,0:4:9.03:228,9,0
chr10	35251837	.	A	AAGGAGG	8495.90	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-1.287;DP=564;FS=1.121;HRun=0;HaplotypeScore=92.1153;InbreedingCoeff=0.8982;MQ=43.34;MQ0=34;MQRankSum=-6.958;QD=32.43;ReadPosRankSum=-3.497;VQSLOD=3.9338;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:21:57.18:0,57,1124	1/1:1,5:7:15.05:418,15,0	0/0:72,0:14:26.85:0,27,521	0/0:97,0:26:43.31:0,43,653	0/0:21,0:21:57.17:0,57,1135	1/1:2,7:11:18:493,18,0	1/1:3,10:14:20.10:497,20,0	1/1:7,6:12:22.27:384,22,0	0/0:16,0:15:36.12:0,36,726	1/1:2,17:22:51.16:1291,51,0	1/1:5,15:20:27.02:592,27,0	0/0:8,0:8:9.03:0,9,170	1/1:4,14:20:9.02:275,9,0	1/1:1,7:10:6.02:132,6,0	1/1:3,11:16:12.04:299,12,0	0/0:8,0:8:24.08:0,24,501	0/0:23,0:24:57.14:0,57,1117	1/1:1,4:6:3.01:101,3,0	1/1:11,1:8:15.02:329,15,0	1/1:5,12:19:36.05:758,36,0	1/1:3,16:22:18.06:473,18,0	1/1:9,1:10:12.04:275,12,0	0/0:12,0:12:21.06:0,21,415	0/0:20,0:20:37.37:0,37,783	1/1:3,8:11:6.02:157,6,0	1/1:3,14:17:48.16:1298,48,0	1/1:4,9:13:15.05:436,15,0	1/1:1,4:7:9.03:289,9,0
chr10	35255740	.	CAG	C	431.59	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=6.827;DP=639;FS=4.052;HRun=0;HaplotypeScore=158.9117;InbreedingCoeff=0.7118;MQ=59.55;MQ0=20;MQRankSum=-1.918;QD=4.50;ReadPosRankSum=1.532;VQSLOD=3.1363;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:22,6:26:20.73:209,21,0	0/0:7,0:7:5.80:0,6,151	0/0:35,0:19:12.13:0,12,180	0/0:53,0:22:22.51:0,23,318	0/0:31,0:30:6:0,6,70	0/0:23,0:23:48.86:0,49,699	0/0:15,0:15:27.07:0,27,400	0/0:30,0:29:63.67:0,64,942	0/0:26,0:26:8.90:0,9,208	0/0:29,0:29:46.05:0,46,853	0/1:22,0:22:28.48:28,0,76	1/1:7,4:10:4.93:113,5,0	0/0:15,0:15:23.66:0,24,383	0/0:15,0:15:30.20:0,30,430	0/0:15,0:15:14.26:0,14,198	0/0:24,0:24:15.41:0,15,330	0/0:26,0:26:24.48:0,24,316	0/0:18,0:17:34.47:0,34,469	0/0:24,0:22:42.04:0,42,585	0/0:21,0:21:45.09:0,45,638	0/0:19,0:19:17.76:0,18,226	0/0:25,0:25:32.94:0,33,492	1/1:15,3:17:17.87:174,18,0	1/1:15,2:17:5.37:57,5,0	0/0:15,1:16:27.08:0,27,386	0/0:32,0:32:58.99:0,59,980	0/0:33,0:33:16.94:0,17,756	0/0:11,0:11:14.89:0,15,321
chr10	35255744	.	GAGAGAGAGAGAC	G	8613.91	PASS	AB=0.809;AC=42;AF=0.875;AN=48;BaseQRankSum=-5.308;DP=633;FS=2.701;HRun=0;HaplotypeScore=217.8104;InbreedingCoeff=0.5273;MQ=59.11;MQ0=23;MQRankSum=-0.404;QD=18.41;ReadPosRankSum=-1.580;VQSLOD=3.5966;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:26:7.58:0,8,144	1/1:7,1:8:15.05:335,15,0	./.	./.	0/1:11,18:28:0:0,0,0	1/1:23,3:26:30.09:742,30,0	./.	1/1:32,0:30:23.99:249,24,0	1/1:5,20:25:6.02:173,6,0	1/1:24,4:28:38.82:936,39,0	./.	0/1:10,0:9:17.24:17,0,82	1/1:14,2:16:21.07:528,21,0	1/1:13,2:15:15.05:422,15,0	1/1:12,4:16:6.02:191,6,0	1/1:8,14:22:9.03:291,9,0	1/1:12,14:26:6.02:147,6,0	1/1:17,2:18:27.09:652,27,0	1/1:24,0:20:18.03:392,18,0	1/1:20,0:20:17.97:314,18,0	1/1:18,1:19:15.05:331,15,0	1/1:21,5:26:9:218,9,0	1/1:17,0:16:4.18:21,4,0	0/0:17,0:17:8.93:0,9,73	1/1:13,3:16:18.06:372,18,0	1/1:29,2:31:36.11:785,36,0	1/1:26,6:32:45.12:1115,45,0	1/1:10,1:11:21.04:384,21,0
chr10	35255756	.	CAG	C	167.56	PASS	AB=0.888;AC=7;AF=0.130;AN=54;BaseQRankSum=6.729;DP=584;FS=6.014;HRun=0;HaplotypeScore=157.3329;InbreedingCoeff=0.1044;MQ=55.14;MQ0=26;MQRankSum=-2.550;QD=1.35;ReadPosRankSum=1.738;VQSLOD=2.3181;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:27,2:27:16.99:115,0,17	0/0:8,0:8:1.51:0,2,63	0/0:20,0:9:5.90:0,6,82	0/0:36,0:10:6.02:0,6,88	./.	0/0:24,0:24:39.48:0,39,401	0/0:12,0:12:12.04:0,12,166	0/0:27,0:25:31.52:0,32,336	0/1:24,0:24:2.70:3,0,62	0/0:30,0:30:22.40:0,22,423	0/0:18,0:18:2.68:0,3,11	0/1:6,4:9:36.80:37,0,45	0/0:14,0:14:15.63:0,16,196	0/0:17,0:17:28.87:0,29,310	0/0:16,0:16:13.08:0,13,132	0/0:21,0:21:0.37:0,0,168	0/0:24,0:24:13.88:0,14,120	0/0:22,0:21:21.44:0,21,209	0/0:25,0:18:32.51:0,33,355	0/0:22,0:22:31.03:0,31,250	0/0:17,0:17:13.49:0,13,67	0/0:33,0:33:14.87:0,15,170	1/1:10,3:11:11.60:110,12,0	0/1:11,4:15:2.83:3,0,14	0/0:16,0:15:16.78:0,17,100	0/0:27,0:27:19.59:0,20,453	0/1:33,0:33:18.58:19,0,191	0/0:8,0:8:8.89:0,9,101
chr10	35255768	.	CAG	C	2167.27	PASS	AB=0.934;AC=26;AF=0.464;AN=56;BaseQRankSum=4.628;DP=616;FS=23.798;HRun=0;HaplotypeScore=142.3661;InbreedingCoeff=-0.4237;MQ=45.26;MQ0=28;MQRankSum=0.350;QD=4.73;ReadPosRankSum=8.530;VQSLOD=0.9600;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,1:27:7.53:0,8,65	0/1:8,0:8:56.94:57,0,114	0/0:21,1:4:3.01:0,3,45	0/0:38,2:4:2.97:0,3,20	0/0:30,0:29:17.89:0,18,257	0/1:25,0:25:99:152,0,195	0/0:11,0:11:9.02:0,9,123	0/1:20,9:27:99:185,0,639	0/1:27,0:26:26.53:27,0,194	0/1:30,0:30:99:163,0,447	0/0:16,0:16:3.01:0,3,47	0/1:9,0:10:11.55:35,0,12	0/1:10,3:13:99:99,0,106	0/1:16,1:17:57.99:58,0,148	0/1:15,3:18:22.13:22,0,179	1/1:17,0:17:7.97:39,8,0	0/1:22,0:22:9.52:10,0,176	0/1:23,1:23:99:103,0,363	0/1:20,1:15:99:122,0,130	0/1:20,1:21:99:152,0,217	0/1:21,1:21:99:106,0,166	0/1:30,0:30:15.48:15,0,474	1/1:14,0:13:4.19:21,4,0	1/1:18,0:20:2.28:32,2,0	0/1:16,1:16:99:165,0,105	0/1:30,1:31:99:321,0,467	0/1:27,2:29:99:235,0,259	1/1:6,2:8:20.82:208,21,0
chr10	35255780	.	CAG	C	605.63	PASS	AB=0.974;AC=17;AF=0.315;AN=54;BaseQRankSum=8.286;DP=670;FS=30.530;HRun=0;HaplotypeScore=156.7853;InbreedingCoeff=-0.3115;MQ=45.77;MQ0=38;MQRankSum=-0.350;QD=1.95;ReadPosRankSum=2.121;VQSLOD=0.7219;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:22:5.98:0,6,98	0/1:8,0:8:18.83:19,0,140	0/0:56,0:7:14.84:0,15,186	0/0:69,1:10:15.71:0,16,175	0/0:30,0:30:23.92:0,24,405	0/1:17,0:17:99:109,0,241	0/0:14,0:14:28.90:0,29,424	0/0:45,0:42:99:0,102,1646	0/1:29,0:27:12.40:12,0,328	0/1:26,0:25:23.66:24,0,678	0/0:18,0:18:9.01:0,9,123	0/0:12,0:9:11.95:0,12,114	0/1:13,2:15:68.94:69,0,157	0/1:15,0:15:40.18:40,0,206	0/1:22,1:23:5.94:6,0,198	0/1:18,0:18:5.27:5,0,173	0/0:25,0:25:8.39:0,8,320	0/1:21,2:22:45.06:45,0,547	0/1:21,0:16:40.12:40,0,364	0/1:17,1:17:44.88:45,0,284	0/1:24,0:23:26.02:26,0,238	0/0:29,0:28:24.75:0,25,559	./.	0/0:18,0:18:9.01:0,9,85	0/1:16,1:16:77.26:77,0,182	0/1:26,0:26:99:159,0,588	0/1:25,1:25:29.24:29,0,370	1/1:3,2:5:8.36:56,8,0
chr10	35255797	.	A	AGAGT	119.52	PASS	AB=0.986;AC=15;AF=0.268;AN=56;BaseQRankSum=5.754;DP=749;FS=9.260;HRun=0;HaplotypeScore=177.2520;InbreedingCoeff=0.1562;MQ=44.15;MQ0=60;MQRankSum=-0.859;QD=0.51;ReadPosRankSum=-5.167;VQSLOD=0.2984;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:30,1:24:1.66:4,2,0	0/0:8,0:8:14.97:0,15,251	0/0:104,0:10:17.02:0,17,360	0/0:110,0:13:26.15:0,26,350	0/0:30,0:30:36.11:0,36,708	0/1:16,0:16:22.10:22,0,355	0/0:20,0:20:45.15:0,45,941	0/0:46,0:45:99:0,132,2491	0/0:27,0:25:27.09:0,27,534	0/0:31,0:29:28.47:0,28,1239	0/0:15,0:15:12.03:0,12,214	1/1:13,0:10:5.49:83,5,0	0/1:12,0:12:1.12:1,0,216	0/1:13,0:13:18.06:18,0,292	0/0:24,0:23:19:0,19,378	0/1:24,0:24:2.14:2,0,499	0/0:28,0:28:17.69:0,18,616	0/1:19,0:18:51.30:51,0,796	0/0:16,0:15:39.08:0,39,675	0/0:14,0:13:23.75:0,24,437	0/1:22,0:21:23.20:23,0,298	0/1:29,0:28:3.95:4,0,655	0/1:12,2:11:0:0,0,0	1/1:19,2:21:2.62:40,3,0	0/0:13,0:12:12.04:0,12,236	0/0:22,0:21:30.99:0,31,916	0/1:22,0:21:6.06:6,0,588	0/0:3,0:3:5.93:0,6,55
chr10	35255812	.	GAGAGAGACAGAGAC	G	264.03	PASS	AB=1.000;AC=13;AF=0.241;AN=54;BaseQRankSum=7.567;DP=813;FS=15.342;HRun=0;HaplotypeScore=231.6966;InbreedingCoeff=0.1358;MQ=44.45;MQ0=78;MQRankSum=-3.299;QD=1.23;ReadPosRankSum=-4.146;VQSLOD=0.0385;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:19:3.48:45,3,0	0/1:8,0:8:26.94:27,0,269	0/0:123,0:9:10.69:0,11,132	0/0:137,0:13:19.61:0,20,236	0/0:27,0:27:45.15:0,45,2096	0/0:17,0:17:17.85:0,18,408	0/0:19,0:19:45.15:0,45,1254	0/0:42,0:40:87.21:0,87,1557	0/0:25,0:23:36.11:0,36,1703	0/1:34,0:30:88.99:89,0,1074	0/0:12,0:12:12.04:0,12,283	1/1:10,7:14:3.95:33,4,0	0/1:16,0:16:32.29:32,0,224	0/0:15,0:15:11.13:0,11,338	0/0:26,0:25:17.23:0,17,536	0/0:25,0:25:51.17:0,51,2947	0/0:23,0:23:35.21:0,35,1756	0/0:17,0:16:16.33:0,16,841	0/1:18,0:17:48.21:48,0,616	0/1:22,0:20:17.82:18,0,554	0/0:28,0:27:13.30:0,13,445	0/0:28,0:27:36.12:0,36,1072	./.	1/1:22,0:22:2.43:96,2,0	0/0:14,0:13:11.96:0,12,277	0/1:26,0:25:19.52:20,0,1078	0/1:26,0:25:0.88:1,0,674	0/0:9,0:9:3.01:0,3,39
chr10	35255828	.	GAGAGAGACAGAGAC	G	3176.12	PASS	AB=0.593;AC=29;AF=0.659;AN=44;BaseQRankSum=6.504;DP=699;FS=27.904;HRun=0;HaplotypeScore=197.1738;InbreedingCoeff=0.6105;MQ=46.40;MQ0=61;MQRankSum=-0.165;QD=10.21;ReadPosRankSum=-2.161;VQSLOD=1.0522;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:14:0.43:1,0,0	1/1:3,6:9:3.48:119,3,0	./.	./.	0/0:25,0:25:39.13:0,39,1790	./.	1/1:21,0:21:14.97:280,15,0	./.	0/0:27,0:25:42.13:0,42,1422	1/1:19,9:25:24.05:666,24,0	0/0:9,1:10:0:0,0,0	0/0:21,0:18:2.43:0,2,40	1/1:4,14:18:3.01:118,3,0	1/1:4,12:16:0.47:1,0,0	1/1:13,18:30:0.47:1,0,0	0/0:23,0:23:51.18:0,51,2962	0/0:26,0:26:35.19:0,35,1470	1/1:19,0:18:8.99:185,9,0	1/1:10,11:19:26.78:646,27,0	1/1:11,13:22:2.63:114,3,0	0/1:10,22:32:0.14:0,0,0	./.	./.	0/0:24,0:24:8.27:0,8,155	1/1:6,5:11:3.01:52,3,0	1/1:10,18:27:47.54:918,48,0	1/1:9,16:24:3.95:120,4,0	1/1:2,8:10:6.02:98,6,0
chr10	35255842	.	C	CAG	1720.87	PASS	AB=0.927;AC=16;AF=0.286;AN=56;BaseQRankSum=2.896;DP=651;FS=7.002;HRun=0;HaplotypeScore=118.1396;InbreedingCoeff=-0.1858;MQ=52.25;MQ0=38;MQRankSum=3.074;QD=6.72;ReadPosRankSum=-2.775;VQSLOD=2.2772;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:20:6.27:0,6,42	1/1:8,0:8:1.18:4,1,0	0/0:44,0:4:8.74:0,9,57	0/0:66,0:17:24.02:0,24,261	0/0:25,0:25:51.11:0,51,662	0/0:17,0:17:3.01:0,3,40	0/1:15,5:20:99:114,0,363	0/1:13,11:20:37.63:507,0,38	0/0:30,0:28:63.21:0,63,838	0/1:21,0:19:99:115,0,245	0/1:8,0:8:37.85:38,0,55	0/0:22,0:20:16.20:0,16,198	0/1:17,0:17:5.68:6,0,34	0/0:16,0:16:3.01:0,3,40	0/0:25,0:24:12.03:0,12,158	0/0:25,0:25:60.20:0,60,797	0/0:28,0:28:57.11:0,57,737	0/1:12,10:22:79.21:79,0,212	0/1:21,0:15:99:261,0,121	0/1:23,0:22:18.59:19,0,175	0/0:32,0:32:7.05:0,7,81	0/1:25,0:25:33.75:34,0,181	0/0:8,0:7:9.01:0,9,103	0/0:24,0:24:23.98:0,24,283	0/1:7,0:7:42.83:43,0,53	0/1:26,0:25:99:541,0,259	0/1:22,0:21:14.31:14,0,70	1/1:10,0:9:6.02:98,6,0
chr10	35257601	.	GC	G	1096.36	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=-0.285;DP=431;FS=1.864;HRun=9;HaplotypeScore=59.5489;InbreedingCoeff=0.7897;MQ=77.75;MQ0=0;MQRankSum=-1.317;QD=16.36;ReadPosRankSum=1.833;VQSLOD=3.9031;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:43,1:44:89.83:0,90,1245	0/0:3,0:3:5.98:0,6,48	0/1:10,0:10:6.37:6,0,116	0/0:18,0:16:17.94:0,18,237	0/0:11,0:11:30.09:0,30,346	0/0:11,0:11:24.07:0,24,277	0/0:20,0:20:54.16:0,54,623	0/0:18,0:19:21.04:0,21,224	0/0:13,0:13:36.11:0,36,414	0/0:8,0:9:23.90:0,24,256	0/0:7,0:7:21.06:0,21,242	1/1:1,19:20:39.02:357,39,0	0/0:17,0:17:21.68:0,22,493	0/0:14,0:14:36.09:0,36,399	0/0:14,0:14:42.12:0,42,476	0/0:7,0:8:23.90:0,24,257	0/0:26,0:26:72.17:0,72,802	0/0:15,0:15:45.11:0,45,507	0/0:12,0:12:21.05:0,21,233	0/0:5,0:5:6.02:0,6,69	0/0:47,0:47:99:0,123,1400	0/0:9,0:9:27.07:0,27,302	1/1:1,12:13:33.01:302,33,0	1/1:1,23:24:63.03:576,63,0	0/0:10,0:10:27.08:0,27,311	0/0:11,0:11:12.04:0,12,139	0/0:13,0:13:39.10:0,39,441	0/0:8,0:8:24.02:0,24,243
chr10	35258348	.	C	CTGTGTGTG	3968.47	PASS	AB=1.000;AC=40;AF=0.909;AN=44;BaseQRankSum=-1.179;DP=380;FS=0.000;HRun=0;HaplotypeScore=113.4320;InbreedingCoeff=0.0288;MQ=41.36;MQ0=18;MQRankSum=-0.499;QD=11.74;ReadPosRankSum=-0.265;VQSLOD=1.7386;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:23:8.93:110,9,0	./.	./.	./.	1/1:9,0:8:3.01:96,3,0	1/1:16,0:16:9.03:229,9,0	1/1:26,0:26:20.74:488,21,0	1/1:21,0:21:15.94:317,16,0	1/1:13,0:13:3.81:20,4,0	1/1:14,0:11:12.50:236,13,0	./.	0/1:19,0:18:6.42:6,0,41	1/1:8,0:8:6.02:144,6,0	./.	1/1:22,0:21:9.91:239,10,0	./.	1/1:21,0:20:17.98:392,18,0	1/1:20,0:15:12.01:294,12,0	1/1:21,0:20:7.05:116,7,0	0/1:10,0:10:0:0,0,0	1/1:15,1:16:6.02:141,6,0	1/1:9,0:7:3.01:92,3,0	0/1:7,0:7:3.33:15,0,3	0/1:17,0:15:42.01:51,0,42	1/1:12,0:11:10.52:270,11,0	1/1:19,0:17:15.05:346,15,0	1/1:6,0:5:6.02:164,6,0	1/1:7,0:6:9.03:204,9,0
chr10	35258533	.	CT	C	564.65	PASS	AB=0.875;AC=14;AF=0.250;AN=56;BaseQRankSum=5.509;DP=468;FS=1.884;HRun=14;HaplotypeScore=60.7623;InbreedingCoeff=0.2200;MQ=60.07;MQ0=17;MQRankSum=1.235;QD=2.96;ReadPosRankSum=3.181;VQSLOD=-0.7019;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:30:54.74:0,55,478	0/0:6,0:6:9.01:0,9,84	0/1:8,0:4:12.06:12,0,19	0/1:9,1:9:13.33:13,0,32	0/0:19,2:20:4.29:0,4,302	0/1:15,2:16:11.30:11,0,175	0/0:17,2:19:0.84:0,1,283	0/1:19,2:22:0.14:0,0,294	0/0:18,0:18:15.45:0,15,276	0/0:18,0:17:36.04:0,36,334	0/0:8,0:9:14.85:0,15,125	1/1:2,13:15:26.78:185,27,0	0/0:12,0:11:14.24:0,14,230	0/0:11,1:11:9.45:0,9,230	0/0:16,1:17:24.36:0,24,349	0/0:7,0:6:15.02:0,15,139	0/1:24,7:31:72.08:72,0,382	0/1:20,4:23:0.03:0,0,283	0/0:9,0:9:20.86:0,21,182	0/1:13,2:16:18.14:18,0,151	0/0:26,0:27:35.14:0,35,338	0/1:9,1:10:1.24:1,0,114	1/1:3,12:15:32.68:226,33,0	1/1:6,10:16:5.32:177,5,0	0/0:28,1:28:21.30:0,21,327	0/0:17,0:18:44.84:0,45,396	0/0:15,0:10:27.02:0,27,246	0/0:6,0:5:3:0,3,28
chr10	35258824	.	T	TG	4227.42	PASS	AB=0.905;AC=34;AF=0.607;AN=56;BaseQRankSum=-7.818;DP=548;FS=30.162;HRun=2;HaplotypeScore=88.7426;InbreedingCoeff=0.6548;MQ=67.34;MQ0=5;MQRankSum=-1.844;QD=11.78;ReadPosRankSum=4.063;VQSLOD=1.7654;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:37,0:37:74.31:531,74,0	1/1:8,0:8:9.14:86,9,0	0/0:37,0:18:28.35:0,28,330	0/0:28,0:16:19.14:0,19,198	0/0:32,0:32:71.21:0,71,418	1/1:7,0:7:3.01:31,3,0	1/1:24,0:24:55.33:476,55,0	1/1:11,26:37:61.48:535,61,0	0/0:17,0:17:31.65:0,32,220	1/1:21,0:25:7.29:311,7,0	1/1:14,0:14:20.72:183,21,0	0/0:15,0:15:18.54:0,19,260	0/1:15,0:15:5.29:208,0,5	1/1:12,0:12:12.93:160,13,0	1/1:13,0:13:23.37:200,23,0	0/0:9,0:9:23.48:0,23,162	0/0:23,0:23:43.41:0,43,274	1/1:18,0:18:19.37:224,19,0	0/1:23,0:23:4.54:332,0,5	1/1:5,13:18:5.60:94,6,0	1/1:15,0:15:15.33:122,15,0	0/1:5,8:13:10.59:12,0,11	0/0:14,0:14:35.74:0,36,278	0/0:14,0:14:28.59:0,29,216	1/1:15,0:16:0.67:155,1,0	1/1:11,22:33:9.67:226,10,0	1/1:23,0:23:30.99:287,31,0	0/1:7,0:7:5.15:53,0,5
chr10	35258853	.	A	AG	1841.77	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-1.236;DP=427;FS=3.683;HRun=1;HaplotypeScore=63.8563;InbreedingCoeff=0.9946;MQ=81.02;MQ0=1;MQRankSum=-3.909;QD=24.23;ReadPosRankSum=2.312;VQSLOD=3.7935;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,24:31:48.07:663,48,0	0/0:8,0:8:21.07:0,21,270	0/0:29,0:20:37.83:0,38,409	0/0:19,0:14:35.08:0,35,395	0/0:19,0:19:57.11:0,57,702	0/0:9,0:9:21.07:0,21,271	0/0:12,0:12:33.09:0,33,414	0/0:14,0:14:27.09:0,27,350	0/0:14,0:14:42.14:0,42,545	0/0:22,0:22:66.18:0,66,836	0/0:11,0:11:33.11:0,33,428	1/1:1,9:10:30.10:442,30,0	0/0:9,0:9:27.09:0,27,350	0/0:11,0:11:27.09:0,27,350	0/0:14,0:14:42.11:0,42,517	0/0:8,0:8:24.04:0,24,280	0/0:16,0:15:36.09:0,36,441	0/0:11,0:11:27.09:0,27,348	0/0:15,0:15:36.11:0,36,452	0/0:10,0:10:27.09:0,27,350	0/0:15,0:15:36.12:0,36,462	0/0:15,0:15:45.15:0,45,584	1/1:2,15:16:33.11:494,33,0	1/1:3,15:18:27.09:404,27,0	0/0:20,0:20:57.19:0,57,739	0/0:22,0:22:66.19:0,66,822	0/0:16,0:16:42.14:0,42,545	0/0:11,0:11:27.04:0,27,306
chr10	35260683	.	G	GCC	978.48	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-0.665;DP=652;FS=0.000;HRun=9;HaplotypeScore=87.5203;InbreedingCoeff=0.9852;MQ=76.99;MQ0=0;MQRankSum=-3.246;QD=13.59;ReadPosRankSum=1.353;VQSLOD=1.2434;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:30.35:0,30,132	0/0:11,0:12:23.75:0,24,225	0/0:27,0:25:30.58:0,31,434	0/0:23,0:22:42.82:0,43,397	0/0:17,0:18:47.85:0,48,491	0/0:18,0:20:53.58:0,54,526	0/0:24,0:24:63.09:0,63,645	0/0:17,0:18:29.77:0,30,299	0/0:29,0:29:69.14:0,69,734	0/0:29,0:29:63.09:0,63,670	0/0:18,0:19:47.83:0,48,490	1/1:0,19:23:27.92:311,28,0	0/0:28,0:28:69.12:0,69,726	0/0:26,0:26:66.13:0,66,695	0/0:28,0:28:72.14:0,72,766	0/0:22,0:23:47.79:0,48,491	0/0:38,0:42:99:0,110,1083	0/0:25,0:25:54.08:0,54,575	0/0:15,0:15:27.03:0,27,287	0/0:15,0:15:33.52:0,34,344	0/0:28,0:29:71.83:0,72,737	0/0:23,0:23:54.06:0,54,568	1/1:7,10:20:20.56:285,21,0	1/1:6,20:29:38.10:524,38,0	0/0:14,0:14:32.79:0,33,327	0/0:23,0:23:43.29:0,43,450	0/0:22,0:22:51.07:0,51,598	0/0:8,0:8:12.02:0,12,127
chr10	35260691	.	C	CA	1164.84	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-3.707;DP=647;FS=5.860;HRun=0;HaplotypeScore=74.5638;InbreedingCoeff=0.8581;MQ=72.33;MQ0=1;MQRankSum=-1.884;QD=31.48;ReadPosRankSum=2.042;VQSLOD=3.1950;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,36:37:90.22:1260,90,0	0/0:10,0:10:23.94:0,24,299	0/0:23,0:19:27.42:0,27,575	0/0:26,0:23:42.23:0,42,530	0/0:21,0:21:56.89:0,57,706	0/0:19,0:19:56.91:0,57,715	0/0:24,0:24:72.21:0,72,939	0/0:12,0:12:32.96:0,33,417	0/0:26,0:26:78.21:0,78,1034	0/0:27,0:27:78.21:0,78,1000	0/0:20,0:20:57.03:0,57,727	0/0:27,0:27:6.01:0,6,110	0/0:30,0:30:86.82:0,87,1091	0/0:28,0:28:81.19:0,81,1036	0/0:30,0:30:90.03:0,90,1142	0/0:20,0:20:57.01:0,57,716	0/0:39,0:39:99:0,114,1447	0/0:23,0:23:69.13:0,69,870	0/0:20,0:19:47.27:0,47,535	0/0:15,0:15:16.71:0,17,452	0/0:33,0:33:90.09:0,90,1120	0/0:28,0:28:77.21:0,77,917	0/0:17,0:17:12.25:0,12,75	0/0:30,0:30:34.04:0,34,240	0/0:16,0:16:44.95:0,45,518	0/0:20,0:20:54.13:0,54,687	0/0:21,0:20:55.21:0,55,810	0/0:5,0:5:15.04:0,15,192
chr10	35261571	.	CT	C	9709.12	PASS	AB=0.941;AC=37;AF=0.661;AN=56;BaseQRankSum=3.752;DP=616;FS=3.010;HRun=10;HaplotypeScore=68.7440;InbreedingCoeff=0.9207;MQ=74.53;MQ0=0;MQRankSum=-2.593;QD=22.27;ReadPosRankSum=1.259;VQSLOD=5.8905;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:51.13:0,51,556	1/1:0,15:15:41.99:365,42,0	0/1:15,1:16:11.15:11,0,109	0/0:10,0:9:12.02:0,12,120	0/0:23,1:24:37.16:0,37,637	1/1:1,26:27:77.98:677,78,0	1/1:0,20:20:50.99:443,51,0	1/1:4,40:44:99:1060,123,0	0/0:20,0:20:54.15:0,54,597	1/1:2,21:24:65.02:553,65,0	1/1:1,12:13:35.99:313,36,0	0/0:3,0:13:28.41:0,28,142	1/1:3,13:16:38.99:339,39,0	1/1:0,11:11:32.99:287,33,0	1/1:3,20:23:56.98:495,57,0	0/0:25,0:25:23.35:0,23,643	0/0:28,0:28:78.21:0,78,863	1/1:1,25:26:68.98:599,69,0	1/1:2,17:19:50.98:443,51,0	1/1:1,23:24:65.97:573,66,0	1/1:3,12:17:39.09:304,39,0	1/1:2,25:27:59.96:521,60,0	0/0:3,0:22:54.13:0,54,282	0/0:3,0:18:37.09:0,37,195	1/1:3,29:32:86.97:755,87,0	1/1:2,30:32:83.94:724,84,0	1/1:0,20:20:59.99:521,60,0	1/1:1,28:29:83.98:729,84,0
chr10	35262535	.	C	CTCTG	29030.40	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-7.386;DP=596;FS=6.635;HRun=0;HaplotypeScore=83.4721;InbreedingCoeff=0.9957;MQ=72.57;MQ0=1;MQRankSum=-8.287;QD=52.69;ReadPosRankSum=3.368;VQSLOD=5.4322;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,40:50:87.30:2233,87,0	1/1:1,9:10:27.09:706,27,0	0/0:23,0:23:63.18:0,63,1087	0/0:22,0:22:45.13:0,45,697	1/1:2,17:19:36.12:910,36,0	1/1:2,16:18:51.18:1334,51,0	1/1:3,11:14:33.11:863,33,0	1/1:12,18:31:63.14:1373,63,0	1/1:4,12:18:36.12:927,36,0	1/1:6,18:23:60.21:1502,60,0	1/1:3,12:14:24.04:544,24,0	1/1:4,12:16:30.10:779,30,0	1/1:5,15:19:48.16:1216,48,0	1/1:1,13:15:33.11:863,33,0	1/1:2,11:13:30.10:784,30,0	1/1:4,12:17:33.11:818,33,0	1/1:8,28:35:75.05:1946,75,0	1/1:5,19:23:57.20:1452,57,0	1/1:6,16:16:45.12:977,45,0	1/1:5,22:27:48.16:1255,48,0	1/1:3,16:19:27.09:658,27,0	1/1:1,14:16:42.14:1046,42,0	1/1:5,13:18:27.09:663,27,0	1/1:4,23:28:51.15:1335,51,0	1/1:0,16:19:39.13:1021,39,0	1/1:3,20:25:69.20:1714,69,0	1/1:4,17:21:54.19:1405,54,0	1/1:2,11:12:27.09:707,27,0
chr10	35263264	.	A	AACACAAACAC	9716.52	PASS	AB=0.988;AC=48;AF=0.857;AN=56;BaseQRankSum=-4.417;DP=671;FS=9.970;HRun=0;HaplotypeScore=185.2736;InbreedingCoeff=0.6546;MQ=54.84;MQ0=15;MQRankSum=-1.576;QD=16.39;ReadPosRankSum=-2.476;VQSLOD=2.9520;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:26:53.22:600,53,0	1/1:1,0:11:14.91:316,15,0	0/0:22,0:17:31.90:0,32,351	0/0:27,0:20:41.07:0,41,374	1/1:20,0:19:30.23:244,30,0	1/1:2,20:32:9.50:468,10,0	1/1:23,0:23:54.64:591,55,0	1/1:36,0:35:65.51:754,66,0	1/1:29,0:29:72.40:581,72,0	1/1:24,0:23:65.35:641,65,0	1/1:5,0:21:26.69:248,27,0	0/0:29,0:28:19.26:0,19,175	1/1:1,16:27:9.02:405,9,0	1/1:3,11:19:6.02:165,6,0	1/1:33,0:33:55.06:700,55,0	1/1:20,0:19:47.27:422,47,0	1/1:9,14:27:13.99:257,14,0	1/1:23,0:22:11.40:604,11,0	1/1:11,0:10:26.09:204,26,0	1/1:9,21:32:34.11:723,34,0	1/1:36,0:35:33.23:351,33,0	1/1:13,1:14:23.89:190,24,0	0/1:20,0:20:13.35:13,0,153	0/1:38,0:39:3.79:4,0,349	1/1:1,9:14:6.02:239,6,0	1/1:25,0:25:53.76:488,54,0	1/1:4,12:18:12.40:318,12,0	1/1:3,7:10:6.02:188,6,0
chr10	35263266	.	C	CACAA	6528.47	PASS	AB=1.000;AC=42;AF=0.750;AN=56;BaseQRankSum=-0.672;DP=656;FS=9.862;HRun=0;HaplotypeScore=143.5485;InbreedingCoeff=-0.0059;MQ=52.36;MQ0=16;MQRankSum=0.847;QD=10.74;ReadPosRankSum=3.765;VQSLOD=3.8711;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:27:13.04:438,13,0	1/1:11,0:11:11.96:179,12,0	0/0:21,0:16:31.90:0,32,351	0/0:27,0:18:41.08:0,41,374	1/1:18,0:16:15.09:195,15,0	1/1:27,0:27:9.92:181,10,0	1/1:24,0:24:24.06:406,24,0	0/1:38,0:37:17.66:557,0,18	0/1:29,0:29:24.74:314,0,25	1/1:24,0:23:55.42:510,55,0	1/1:19,0:19:23.72:188,24,0	1/1:28,0:28:8.57:179,9,0	0/1:27,0:27:11.88:162,0,12	1/1:19,0:19:4.54:27,5,0	0/1:33,0:33:34.77:473,0,35	1/1:20,0:19:18.24:317,18,0	0/1:24,0:24:23.25:53,0,23	0/1:23,0:22:14.35:319,0,14	1/1:11,0:10:12.02:164,12,0	0/1:31,0:31:7.55:274,0,8	0/1:37,0:36:10.77:281,0,11	1/1:13,0:13:23.89:190,24,0	0/1:20,0:20:1.98:182,0,2	0/1:37,0:37:45.72:293,0,46	1/1:13,0:13:5.98:79,6,0	1/1:7,16:25:0.49:392,0,0	1/1:19,0:19:7.07:112,7,0	1/1:10,0:8:3.90:62,4,0
chr10	35263268	.	C	CAA	6198.87	PASS	AB=0.973;AC=34;AF=0.607;AN=56;BaseQRankSum=-1.325;DP=665;FS=15.794;HRun=1;HaplotypeScore=126.9259;InbreedingCoeff=-0.3949;MQ=51.80;MQ0=16;MQRankSum=0.145;QD=10.03;ReadPosRankSum=4.098;VQSLOD=0.3547;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:27,1:28:39.16:345,0,39	0/1:11,0:11:10.21:73,0,10	0/0:21,0:15:34.83:0,35,368	0/0:26,0:16:44.09:0,44,398	0/1:18,0:16:19.07:176,0,19	1/1:28,0:28:9.91:102,10,0	1/1:24,0:24:2.97:372,3,0	0/1:39,0:38:54.83:528,0,55	0/1:28,0:28:99:285,0,155	1/1:24,0:23:20.06:400,20,0	1/1:19,0:19:3.13:101,3,0	1/1:3,23:27:21.51:458,22,0	0/1:26,0:26:53.79:78,0,54	1/1:17,0:17:2.77:20,3,0	0/1:34,0:34:73.75:370,0,74	0/1:20,0:19:70.02:285,0,70	0/1:23,0:23:26.10:26,0,63	0/1:23,0:22:40.69:215,0,41	0/1:11,0:10:5.58:150,0,6	0/1:30,0:30:28.89:187,0,29	0/1:41,0:40:38.79:270,0,39	1/1:15,0:15:25.70:195,26,0	1/1:2,19:21:7.80:419,8,0	0/1:6,31:39:17.05:776,0,17	0/1:12,0:12:15.96:43,0,16	0/1:27,0:27:35.42:245,0,35	0/1:20,0:20:21.34:53,0,21	0/1:12,0:10:22.10:28,0,22
chr10	35263893	.	CG	C	2385.87	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=12.327;DP=658;FS=6.161;HRun=3;HaplotypeScore=70.2690;InbreedingCoeff=0.9999;MQ=80.95;MQ0=0;MQRankSum=-0.338;QD=32.68;ReadPosRankSum=2.446;VQSLOD=4.2000;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,135,1906	0/0:12,0:12:33.11:0,33,475	0/0:18,0:18:46.69:0,47,638	0/0:17,0:17:45.08:0,45,601	0/0:20,0:20:60.19:0,60,845	0/0:18,0:18:51.14:0,51,678	0/0:18,0:18:54.18:0,54,777	0/0:31,0:31:81.25:0,81,1133	0/0:25,0:25:72.23:0,72,1017	0/0:24,0:24:66.22:0,66,936	0/0:19,0:19:54.18:0,54,776	1/1:0,33:33:99:1227,99,0	0/0:23,0:23:69.21:0,69,971	0/0:26,0:26:72.23:0,72,1016	0/0:24,0:24:69.22:0,69,974	0/0:16,0:16:48.16:0,48,691	0/0:27,0:27:81.23:0,81,1127	0/0:17,0:17:48.16:0,48,691	0/0:15,0:15:42.14:0,42,601	0/0:32,0:32:87.23:0,87,1161	0/0:20,0:20:60.20:0,60,864	0/0:35,0:35:99:0,102,1449	1/1:0,15:15:45.14:558,45,0	1/1:0,25:25:60.19:744,60,0	0/0:23,0:23:69.23:0,69,989	0/0:31,0:31:90.30:0,90,1295	0/0:28,0:28:84.27:0,84,1179	0/0:21,0:21:54.18:0,54,776
chr10	35264057	.	G	GGATT	30755	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-16.268;DP=733;FS=10.299;HRun=0;HaplotypeScore=96.2611;InbreedingCoeff=0.9999;MQ=74.64;MQ0=2;MQRankSum=-5.203;QD=61.88;ReadPosRankSum=0.613;VQSLOD=6.5940;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:93.30:0,93,1647	1/1:2,12:14:33.11:864,33,0	0/0:14,0:14:39.11:0,39,669	0/0:16,0:16:39.13:0,39,696	0/0:28,0:27:75.26:0,75,1354	1/1:2,19:21:51.17:1336,51,0	1/1:4,22:28:63.22:1562,63,0	1/1:10,29:41:99:2447,102,0	0/0:25,0:25:75.26:0,75,1364	1/1:2,25:30:81.23:1899,81,0	1/1:4,28:34:87.26:2192,87,0	0/0:28,0:28:81.28:0,81,1466	1/1:3,22:25:63.22:1633,63,0	1/1:2,20:22:60.21:1565,60,0	1/1:3,26:30:69.24:1806,69,0	0/0:15,0:15:45.15:0,45,804	0/0:30,0:30:81.27:0,81,1445	1/1:2,15:18:39.13:1022,39,0	1/1:5,12:18:42.13:1046,42,0	1/1:6,31:38:96.29:2410,96,0	1/1:6,22:28:60.16:1453,60,0	1/1:1,25:26:69.19:1726,69,0	0/0:26,0:26:78.26:0,78,1396	0/0:20,0:20:51.17:0,51,928	1/1:6,23:30:63.22:1634,63,0	1/1:3,30:34:93.32:2379,93,0	1/1:4,26:31:72.25:1840,72,0	1/1:2,25:27:75.26:1942,75,0
chr10	35264416	.	GA	G	1416.22	PASS	AB=0.754;AC=8;AF=0.143;AN=56;BaseQRankSum=8.419;DP=578;FS=4.458;HRun=10;HaplotypeScore=65.3112;InbreedingCoeff=0.7626;MQ=83.03;MQ0=1;MQRankSum=-1.257;QD=13.75;ReadPosRankSum=1.589;VQSLOD=3.8805;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:72.18:0,72,789	0/0:7,0:7:21.06:0,21,232	0/0:29,0:26:23.73:0,24,350	0/1:22,1:23:18.59:19,0,232	1/1:4,33:37:89.94:774,90,0	0/0:29,0:29:84.21:0,84,914	0/0:14,0:14:39.09:0,39,423	0/0:36,0:36:59.96:0,60,616	1/1:1,13:14:23.99:208,24,0	0/0:24,1:25:31.13:0,31,553	0/0:22,0:22:54.14:0,54,595	0/0:15,1:18:27.72:0,28,487	0/0:16,0:16:45.12:0,45,498	0/0:20,0:19:54.13:0,54,589	0/0:18,0:18:51.14:0,51,564	0/1:2,9:11:3.19:204,0,3	1/1:3,15:18:41.98:365,42,0	0/0:22,0:22:54.42:0,54,626	0/0:15,0:15:42.11:0,42,464	0/0:19,0:19:54.14:0,54,591	0/0:16,0:16:39.11:0,39,430	0/0:13,0:13:30.06:0,30,318	0/0:16,0:16:42.10:0,42,454	0/0:22,0:25:65.68:0,66,673	0/0:14,0:14:36.10:0,36,398	0/0:26,0:26:66.18:0,66,730	0/0:27,0:27:75.15:0,75,808	0/0:23,0:23:66.17:0,66,722
chr10	35264668	.	G	GT	463.96	PASS	AB=0.583;AC=5;AF=0.089;AN=56;BaseQRankSum=-4.760;DP=459;FS=1.816;HRun=10;HaplotypeScore=48.4300;InbreedingCoeff=0.7788;MQ=71.06;MQ0=5;MQRankSum=0.314;QD=17.18;ReadPosRankSum=-0.330;VQSLOD=3.7230;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:68.65:0,69,554	0/0:7,0:8:23.01:0,23,178	0/0:8,0:8:11.88:0,12,96	0/0:13,0:12:17.90:0,18,144	0/0:17,0:17:35.84:0,36,295	0/0:21,0:21:59.76:0,60,479	0/0:15,1:15:28.09:0,28,307	0/0:28,0:25:62.86:0,63,510	0/0:14,0:14:26.94:0,27,222	0/0:17,0:18:40.95:0,41,323	0/0:15,0:15:26.93:0,27,218	0/1:2,5:7:6.60:142,0,7	0/0:16,0:16:30.09:0,30,298	0/0:17,0:17:41.88:0,42,342	0/0:9,0:9:26.97:0,27,221	0/0:10,0:10:26.97:0,27,222	0/0:27,0:27:73.95:0,74,597	0/0:20,0:20:50.90:0,51,412	0/0:24,1:24:19.96:0,20,328	0/0:20,0:20:44.82:0,45,359	0/0:15,0:15:42.44:0,42,306	0/0:5,0:5:10.80:0,11,79	1/1:2,12:14:30.08:320,30,0	1/1:0,6:5:12.03:128,12,0	0/0:15,0:15:38.91:0,39,315	0/0:21,0:21:53.91:0,54,440	0/0:27,0:28:67.93:0,68,544	0/0:14,0:13:29.73:0,30,234
chr10	35266224	.	G	GTC	600.73	PASS	AB=0.942;AC=18;AF=0.346;AN=52;BaseQRankSum=1.370;DP=334;FS=2.890;HRun=0;HaplotypeScore=64.4685;InbreedingCoeff=-0.1749;MQ=38.22;MQ0=31;MQRankSum=-0.317;QD=4.06;ReadPosRankSum=2.747;VQSLOD=1.4895;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:16:3:0,3,25	0/0:3,0:3:2.37:0,2,8	0/0:50,0:5:11.98:0,12,100	0/0:61,0:4:8.96:0,9,69	0/1:9,0:9:3.56:4,0,19	0/1:11,0:8:12.79:37,0,13	0/1:13,2:15:10.76:127,0,11	0/0:2,0:1:2.94:0,3,18	0/0:7,0:6:17.96:0,18,197	0/1:9,0:9:41.98:42,0,67	./.	0/0:5,0:4:5.25:0,5,24	1/1:2,0:2:5.60:44,6,0	0/1:9,1:10:32.33:103,0,32	0/1:10,0:10:17.89:24,0,18	0/0:8,0:8:6.11:0,6,151	0/1:19,0:18:21.73:22,0,76	0/1:10,0:7:11.57:33,0,12	0/1:7,1:7:47.06:71,0,47	1/1:0,1:1:3.01:57,3,0	0/1:21,1:20:28.43:28,0,29	./.	0/0:7,0:6:2.37:0,2,8	0/0:14,0:11:2.31:0,2,10	0/1:3,1:4:26:37,0,26	0/1:9,0:8:7.36:7,0,21	1/1:5,2:6:11.89:110,12,0	0/0:1,0:1:2.96:0,3,19
chr10	35266232	.	GTC	G	849.29	PASS	AB=0.933;AC=33;AF=0.660;AN=50;BaseQRankSum=0.838;DP=316;FS=3.305;HRun=0;HaplotypeScore=56.6673;InbreedingCoeff=0.2554;MQ=36.30;MQ0=32;MQRankSum=1.013;QD=5.62;ReadPosRankSum=1.550;VQSLOD=2.3547;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:16:5.99:50,6,0	1/1:1,1:2:2.94:18,3,0	0/0:58,0:6:7.71:0,8,65	0/0:70,0:5:1.19:0,1,49	1/1:5,1:6:3.90:42,4,0	1/1:9,1:8:6.01:69,6,0	0/1:10,2:12:13.94:90,0,14	./.	0/1:5,1:5:6.25:6,0,33	1/1:3,0:3:6.41:42,6,0	./.	0/0:5,0:4:5.93:0,6,66	1/1:0,2:2:6.02:76,6,0	1/1:7,0:7:10.87:108,11,0	1/1:7,2:9:8.93:67,9,0	0/1:5,0:5:2.90:3,0,79	0/1:18,1:18:1.90:20,0,2	1/1:9,1:7:8.95:76,9,0	0/1:8,0:7:6.75:51,0,7	0/0:1,0:1:2.98:0,3,22	1/1:15,3:16:5.12:47,5,0	./.	0/0:7,0:6:2.99:0,3,23	0/0:12,0:9:0:0,0,0	1/1:3,1:4:6.47:70,6,0	1/1:5,0:5:6.01:63,6,0	1/1:6,0:6:8.96:69,9,0	1/1:1,0:1:2.98:22,3,0
chr10	35266233	.	TCTGTGTCTGCGC	T	2448.22	PASS	AB=1.000;AC=41;AF=0.820;AN=50;BaseQRankSum=-0.533;DP=313;FS=3.970;HRun=0;HaplotypeScore=67.6982;InbreedingCoeff=0.2745;MQ=36.06;MQ0=32;MQRankSum=2.518;QD=15.30;ReadPosRankSum=2.254;VQSLOD=1.4032;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:16:5.99:50,6,0	1/1:2,0:2:2.94:18,3,0	0/0:58,0:6:17.07:0,17,205	0/0:70,0:5:14.51:0,15,191	1/1:6,0:6:6.02:115,6,0	1/1:9,0:7:6.01:88,6,0	1/1:12,0:12:17.67:220,18,0	./.	0/1:6,0:5:33.95:34,0,40	1/1:3,0:3:6.87:100,7,0	./.	0/1:5,0:4:15.86:16,0,19	1/1:2,0:2:6.02:132,6,0	1/1:7,0:7:19.59:378,20,0	1/1:9,0:9:8.95:95,9,0	0/1:5,0:5:13.49:110,0,13	1/1:18,0:17:10.12:210,10,0	1/1:10,0:7:9.01:126,9,0	1/1:2,6:7:14.26:251,14,0	1/1:1,0:1:2.92:17,3,0	1/1:18,0:16:9.03:195,9,0	./.	1/1:6,0:5:0.47:1,0,0	0/0:12,0:9:0.59:0,1,1	1/1:4,0:4:6.47:82,6,0	1/1:5,0:5:6.01:78,6,0	1/1:5,0:5:9.03:201,9,0	1/1:1,0:1:3.01:68,3,0
chr10	35266239	.	TCTGCGC	T	1726.95	PASS	AB=0.875;AC=38;AF=0.826;AN=46;BaseQRankSum=0.755;DP=299;FS=21.338;HRun=0;HaplotypeScore=50.3848;InbreedingCoeff=0.3312;MQ=33.96;MQ0=33;MQRankSum=2.690;QD=14.64;ReadPosRankSum=1.378;VQSLOD=0.8067;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/1:2,0:2:0:0,0,0	0/0:64,0:8:19.91:0,20,207	0/0:79,0:7:15.88:0,16,226	1/1:4,0:4:6:68,6,0	1/1:3,6:8:3.01:45,3,0	1/1:7,3:10:6.99:85,7,0	./.	0/1:2,1:2:27.20:38,0,27	1/1:1,0:1:3.01:59,3,0	./.	1/1:1,3:3:3.01:58,3,0	1/1:2,0:2:6.02:91,6,0	1/1:5,1:6:16.30:264,16,0	1/1:2,5:7:3.01:35,3,0	1/1:3,0:3:9.02:152,9,0	1/1:6,11:15:15.94:294,16,0	1/1:5,5:7:5.97:90,6,0	1/1:7,0:6:12:170,12,0	./.	1/1:14,3:15:9.02:119,9,0	./.	1/1:4,0:3:3:25,3,0	0/0:9,3:9:0.28:0,0,1	1/1:1,3:4:3:27,3,0	1/1:3,0:2:3.47:26,3,0	1/1:0,4:4:9.03:162,9,0	1/1:1,0:1:3.01:42,3,0
chr10	35266280	.	CTGTGTGTGTG	C	2017.52	PASS	AB=1.000;AC=37;AF=0.712;AN=52;BaseQRankSum=-7.825;DP=451;FS=3.560;HRun=0;HaplotypeScore=132.5862;InbreedingCoeff=-0.0836;MQ=39.09;MQ0=64;MQRankSum=0.930;QD=5.19;ReadPosRankSum=-5.255;VQSLOD=0.5323;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:26:35.58:0,36,475	1/1:7,0:3:5.96:45,6,0	./.	./.	1/1:15,0:11:0.94:1,1,0	0/1:15,0:14:59.63:62,0,60	1/1:30,0:25:10.10:97,10,0	1/1:24,5:16:26.17:259,26,0	0/0:6,0:6:0:0,0,0	0/1:24,0:12:99:103,0,140	1/1:8,0:6:7.17:64,7,0	1/1:13,0:12:16.61:130,17,0	1/1:7,0:6:1.74:20,2,0	0/1:18,0:15:44.63:45,0,46	1/1:14,0:13:6.50:71,7,0	0/1:5,0:5:26.16:34,0,26	1/1:16,0:15:25.01:324,25,0	0/1:15,0:15:80.07:80,0,129	1/1:8,0:6:11.93:98,12,0	0/1:9,0:6:33.95:34,0,133	0/1:63,0:54:99:142,0,104	1/1:18,0:16:2.96:19,3,0	1/1:4,4:6:3:25,3,0	1/1:23,0:21:28.51:362,29,0	1/1:16,0:16:4.83:48,5,0	0/1:18,0:11:57.26:57,0,148	0/1:10,0:9:40.50:41,0,44	0/0:5,0:4:0.47:0,0,1
chr10	35267720	.	T	TAC	1914.04	PASS	AB=0.904;AC=27;AF=0.563;AN=48;BaseQRankSum=0.675;DP=482;FS=3.230;HRun=0;HaplotypeScore=78.8799;InbreedingCoeff=-0.0252;MQ=67.19;MQ0=9;MQRankSum=-0.964;QD=5.84;ReadPosRankSum=-2.723;VQSLOD=2.0388;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:21,7:27:17.72:37,0,18	1/1:2,2:5:3.01:44,3,0	./.	./.	0/0:16,0:17:5.80:0,6,34	1/1:18,0:18:7.25:69,7,0	0/1:14,0:14:20.43:64,0,20	1/1:23,0:21:11.82:87,12,0	0/0:12,0:12:11.99:0,12,111	0/1:16,7:23:13.66:147,0,14	1/1:12,7:19:12.04:174,12,0	./.	1/1:13,0:13:20.97:188,21,0	0/1:8,1:10:35.29:35,0,36	0/1:6,5:10:14.34:79,0,14	0/0:7,0:7:2.84:0,3,14	0/0:18,0:18:7.26:0,7,162	1/1:17,0:15:12.50:150,12,0	1/1:9,0:7:5.91:56,6,0	0/1:22,0:21:51.28:149,0,51	0/1:28,0:27:7.04:258,0,7	1/1:8,1:17:3:27,3,0	0/1:13,0:18:0:0,0,0	0/0:12,0:19:0.47:0,0,1	0/1:13,0:13:6.20:171,0,6	0/1:27,0:27:5.30:251,0,5	0/1:13,0:13:15.18:72,0,15	./.
chr10	35267891	.	AG	A	12082.50	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=9.119;DP=591;FS=5.953;HRun=3;HaplotypeScore=59.2196;InbreedingCoeff=0.9997;MQ=95.21;MQ0=0;MQRankSum=-4.108;QD=33.38;ReadPosRankSum=0.873;VQSLOD=5.2969;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,126,1777	1/1:0,11:11:30.09:372,30,0	0/0:31,0:31:53.34:0,53,1073	0/0:23,0:23:60.17:0,60,821	0/0:20,0:20:57.18:0,57,798	1/1:1,18:19:39.12:483,39,0	1/1:1,14:15:39.12:480,39,0	1/1:0,30:30:90.24:1078,90,0	0/0:21,0:21:63.20:0,63,886	1/1:0,27:27:81.25:1000,81,0	1/1:0,15:15:39.12:484,39,0	0/0:24,0:24:72.20:0,72,1013	1/1:0,16:16:42.13:520,42,0	1/1:1,19:20:57.18:707,57,0	1/1:0,16:16:42.13:521,42,0	0/0:12,0:12:30.10:0,30,431	0/0:23,0:23:66.22:0,66,947	1/1:0,12:12:36.11:444,36,0	1/1:1,18:19:57.18:705,57,0	1/1:1,16:17:45.14:554,45,0	1/1:0,35:35:96.30:1190,96,0	1/1:0,25:25:69.22:853,69,0	0/0:13,0:13:39.13:0,39,554	0/0:19,0:19:54.17:0,54,760	1/1:1,19:20:48.15:595,48,0	1/1:1,34:35:99:1241,102,0	1/1:0,20:20:39.12:483,39,0	1/1:0,10:10:30.09:372,30,0
chr10	35268205	.	GCTGCTGCTGTCCCTGCTGCTGTCCCTGCTGCTGTCCCTGCTGCTGTCC	G	3191.43	PASS	AB=1.000;AC=28;AF=0.519;AN=54;BaseQRankSum=-5.184;DP=530;FS=2.546;HRun=0;HaplotypeScore=551.0712;InbreedingCoeff=0.6323;MQ=68.78;MQ0=2;MQRankSum=-0.550;QD=12.04;ReadPosRankSum=0.165;VQSLOD=-0.1555;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:36:31.64:0,32,1288	1/1:5,0:5:9.03:259,9,0	0/0:18,0:15:0.89:0,1,2	0/0:28,0:26:3.01:0,3,53	0/0:12,0:12:9.03:0,9,545	1/1:12,0:12:12.04:324,12,0	1/1:28,0:28:14.54:301,15,0	0/1:16,0:16:0:0,0,0	0/0:12,0:12:6.49:0,6,436	1/1:22,0:22:12.04:299,12,0	./.	0/0:19,0:19:21.07:0,21,879	1/1:9,0:9:3.01:85,3,0	0/1:18,0:18:99:120,0,181	1/1:18,0:18:12.04:244,12,0	0/0:9,0:9:12.04:0,12,928	0/0:33,0:33:66.23:0,66,5722	1/1:17,0:16:12.04:487,12,0	0/0:21,0:21:0:0,0,0	1/1:6,0:6:3.01:60,3,0	1/1:48,0:47:11.53:192,12,0	0/0:18,0:18:1.98:0,2,7	0/0:7,0:7:6.02:0,6,265	0/0:40,0:39:47.37:0,47,2486	1/1:15,0:15:9.03:183,9,0	1/1:22,8:30:21.04:460,21,0	1/1:15,0:15:9.03:298,9,0	1/1:6,0:6:3.01:59,3,0
chr10	35268250	.	G	GGT	2410.25	PASS	AB=0.696;AC=25;AF=0.521;AN=48;BaseQRankSum=2.252;DP=292;FS=9.819;HRun=0;HaplotypeScore=68.5289;InbreedingCoeff=0.5364;MQ=46.82;MQ0=45;MQRankSum=-2.007;QD=24.10;ReadPosRankSum=-4.526;VQSLOD=2.4494;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:17:39.10:0,39,572	1/1:1,3:4:4.51:173,5,0	./.	0/0:26,0:2:3.01:0,3,45	0/0:6,0:3:9.03:0,9,147	1/1:1,3:5:6.92:236,7,0	1/1:4,5:11:14.84:226,15,0	./.	0/0:9,0:9:27.09:0,27,440	1/1:0,4:4:12.04:243,12,0	./.	0/0:19,0:19:51.17:0,51,828	0/1:2,2:4:6.61:53,0,7	0/1:6,2:8:39.52:133,0,40	1/1:2,5:7:17.25:249,17,0	0/0:11,0:11:30.09:0,30,464	0/0:39,0:38:99:0,111,1783	1/1:7,4:10:14.49:265,14,0	0/0:1,0:1:2.37:0,2,8	1/1:2,1:3:6:84,6,0	0/1:7,9:17:34.66:171,0,35	./.	0/0:4,0:4:12.04:0,12,191	0/0:33,0:31:70.04:0,70,1121	1/1:2,3:5:0.43:171,0,0	1/1:8,0:8:18.03:326,18,0	1/1:7,3:10:4.31:196,4,0	1/1:1,1:2:2.32:57,2,0
chr10	35268254	.	C	CAG	562.76	PASS	AB=0.888;AC=13;AF=0.250;AN=52;BaseQRankSum=5.558;DP=303;FS=26.727;HRun=0;HaplotypeScore=63.3447;InbreedingCoeff=0.1808;MQ=46.75;MQ0=44;MQRankSum=-1.588;QD=8.53;ReadPosRankSum=-2.135;VQSLOD=0.9297;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:14:34.32:0,34,479	1/1:2,2:4:5.95:78,6,0	0/0:18,0:1:3.01:0,3,42	0/0:25,0:3:3.01:0,3,33	0/0:5,0:3:9.03:0,9,142	1/1:4,0:4:5.99:81,6,0	0/1:9,2:11:58.66:59,0,59	./.	0/0:9,0:9:27.09:0,27,440	0/1:5,0:5:38.13:47,0,38	./.	0/0:19,0:19:57.09:0,57,879	1/1:5,0:5:2.99:24,3,0	0/0:8,2:10:6.01:0,6,76	1/1:4,1:5:3:25,3,0	0/0:13,0:13:33.11:0,33,535	0/0:40,0:39:99:0,114,1826	0/1:8,4:11:99:213,0,203	0/0:1,0:1:2.98:0,3,21	0/0:2,0:2:3:0,3,25	0/0:19,3:21:18.41:0,18,138	0/0:3,0:3:5.98:0,6,66	0/0:5,0:5:12.02:0,12,170	0/0:32,0:30:68.02:0,68,1079	0/0:8,0:8:5.96:0,6,44	0/1:9,0:9:30.75:80,0,31	0/1:9,2:11:80.82:100,0,81	0/0:2,0:2:3.01:0,3,39
chr10	35268346	.	TTTGCTGGA	T	10743.34	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-1.843;DP=731;FS=2.619;HRun=0;HaplotypeScore=183.4620;InbreedingCoeff=0.8604;MQ=74.52;MQ0=9;MQRankSum=3.905;QD=20.04;ReadPosRankSum=2.039;VQSLOD=4.4909;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:65.95:0,66,834	1/1:12,0:12:17.27:253,17,0	0/0:39,0:32:28.71:0,29,268	0/0:37,0:32:27.71:0,28,351	1/1:7,0:7:6:55,6,0	1/1:21,0:21:38.76:533,39,0	1/1:41,0:40:26.15:678,26,0	1/1:16,7:23:18:176,18,0	1/1:31,0:31:54.16:851,54,0	1/1:12,11:21:33.07:458,33,0	1/1:4,10:14:26.57:251,27,0	0/0:31,0:31:12.32:0,12,84	1/1:21,0:19:33.10:500,33,0	1/1:32,0:32:66.97:932,67,0	1/1:24,0:24:40.94:642,41,0	1/1:13,0:13:21.04:299,21,0	1/1:45,0:45:76.57:1154,77,0	1/1:23,0:23:15.11:417,15,0	1/1:20,4:22:11.39:154,11,0	1/1:6,10:14:24.04:278,24,0	1/1:64,0:62:61.22:996,61,0	1/1:8,16:24:26.80:224,27,0	0/0:15,0:15:3.06:0,3,25	0/0:34,0:33:4.89:0,5,53	1/1:23,0:23:47.58:652,48,0	1/1:11,21:31:60.10:815,60,0	1/1:18,0:17:27.06:379,27,0	1/1:5,0:5:3.01:46,3,0
chr10	35268467	.	TGATTGCTG	T	915.31	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=0.325;DP=619;FS=0.000;HRun=0;HaplotypeScore=136.2480;InbreedingCoeff=0.6976;MQ=53.85;MQ0=39;MQRankSum=0.335;QD=11.89;ReadPosRankSum=2.898;VQSLOD=2.3520;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:32:36.07:0,36,688	0/0:4,0:4:6.01:0,6,87	0/0:28,0:6:1.25:0,1,3	0/1:25,0:6:0.17:1,0,0	0/0:14,0:14:12.04:0,12,250	0/0:23,0:22:39.04:0,39,706	0/0:28,0:27:21.06:0,21,387	0/0:25,0:24:0:0,0,0	0/0:21,0:20:21.04:0,21,404	0/0:30,0:28:39.11:0,39,733	0/0:11,0:11:30.07:0,30,698	1/1:14,0:14:18.03:330,18,0	0/0:28,0:27:59.75:0,60,1437	0/0:16,0:16:21.02:0,21,443	0/0:22,0:20:24.02:0,24,463	0/0:24,0:24:39.12:0,39,970	0/0:42,0:40:69.16:0,69,1399	0/0:24,0:23:30.07:0,30,767	0/0:14,0:12:3.01:0,3,80	0/0:6,0:6:12.02:0,12,311	0/0:53,0:47:66.19:0,66,1442	0/0:17,0:17:21.07:0,21,539	0/0:8,4:11:0.89:0,1,2	1/1:38,0:36:45.05:702,45,0	0/0:15,0:15:30.10:0,30,738	0/0:22,0:22:30.10:0,30,683	0/0:19,0:19:24.08:0,24,572	0/0:7,0:6:9.03:0,9,217
chr10	35269324	.	TACAC	T	3817.57	PASS	AB=0.795;AC=33;AF=0.635;AN=52;BaseQRankSum=-4.621;DP=599;FS=0.647;HRun=0;HaplotypeScore=111.2313;InbreedingCoeff=0.2359;MQ=65.98;MQ0=2;MQRankSum=0.014;QD=9.20;ReadPosRankSum=1.158;VQSLOD=2.9657;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:31:18.04:0,18,327	0/0:7,0:7:3.01:0,3,40	./.	./.	0/1:13,2:22:62.09:70,0,62	1/1:13,7:20:9.03:140,9,0	1/1:22,7:31:6.36:289,6,0	0/0:15,0:15:5.97:0,6,58	0/1:17,1:19:24.43:35,0,24	1/1:21,2:22:9.03:124,9,0	1/1:9,9:19:10.40:274,10,0	0/0:15,0:20:13.41:0,13,227	1/1:7,5:14:1.33:245,1,0	1/1:11,5:16:6.02:94,6,0	1/1:15,12:28:39.12:580,39,0	0/1:14,0:21:22.53:27,0,23	0/1:14,3:25:67.76:121,0,68	1/1:14,8:22:18.06:281,18,0	1/1:6,6:12:15.03:192,15,0	0/1:10,4:14:37.26:172,0,37	0/1:25,12:39:25.03:344,0,25	1/1:11,4:15:9.03:127,9,0	0/0:15,0:21:3.48:0,3,54	0/0:23,0:30:24.48:0,24,391	1/1:16,7:24:15.01:207,15,0	1/1:17,0:17:8.94:108,9,0	1/1:11,8:19:24.07:355,24,0	0/1:13,0:13:27.61:33,0,28
chr10	35272085	.	A	ATG	3392.72	PASS	AB=0.623;AC=8;AF=0.143;AN=56;BaseQRankSum=-10.847;DP=751;FS=0.000;HRun=0;HaplotypeScore=90.1888;InbreedingCoeff=0.0627;MQ=58.52;MQ0=22;MQRankSum=0.871;QD=18.85;ReadPosRankSum=0.785;VQSLOD=3.7484;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:51:95.86:0,96,1024	0/0:12,0:12:30.09:0,30,350	0/0:37,0:11:6.01:0,6,64	0/0:51,0:14:5.97:0,6,45	1/1:6,18:25:7.14:570,7,0	0/0:22,0:24:38.56:0,39,383	0/0:28,0:32:4.34:0,4,290	0/0:32,0:32:44.74:0,45,459	0/1:8,12:21:13.03:434,0,13	0/0:22,0:22:38.93:0,39,418	0/0:19,0:19:44.95:0,45,494	0/1:13,15:28:48.50:519,0,48	0/0:15,0:16:35.56:0,36,325	0/0:11,0:14:23.55:0,24,206	0/0:26,0:27:60:0,60,669	0/1:10,10:21:97.63:252,0,98	0/1:14,21:34:9.80:755,0,10	0/0:34,0:34:65.96:0,66,720	0/0:21,0:17:21.04:0,21,234	0/0:24,0:26:53.95:0,54,577	0/0:33,0:31:53.92:0,54,583	0/0:16,0:19:0.97:0,1,424	0/1:8,16:23:39.06:432,0,39	0/1:7,18:25:65.87:431,0,66	0/0:15,0:14:30.07:0,30,338	0/0:33,0:33:59.84:0,60,658	0/0:25,0:24:42.12:0,42,485	0/0:18,0:18:35.90:0,36,384
chr10	35272624	.	T	TC	2402.23	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-6.444;DP=716;FS=11.276;HRun=5;HaplotypeScore=74.2609;InbreedingCoeff=0.9992;MQ=82.59;MQ0=0;MQRankSum=-0.087;QD=30.41;ReadPosRankSum=-0.276;VQSLOD=3.3141;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,132,1400	0/0:15,0:15:42.11:0,42,451	0/0:29,0:28:62.29:0,62,657	0/0:25,0:25:25.33:0,25,430	0/0:25,0:25:72.18:0,72,773	0/0:23,0:23:63.11:0,63,664	0/0:20,0:20:57.12:0,57,604	0/0:43,0:43:99:0,117,1245	0/0:29,0:29:84.19:0,84,894	0/0:26,0:26:75.18:0,75,802	0/0:20,0:20:54.10:0,54,568	1/1:2,22:24:57.17:730,57,0	0/0:23,0:23:66.16:0,66,708	0/0:14,0:14:36.09:0,36,386	0/0:29,0:29:78.19:0,78,838	0/0:30,0:30:84.21:0,84,903	0/0:36,0:36:99:0,102,1088	0/0:16,0:16:45.11:0,45,481	0/0:26,0:26:75.15:0,75,793	0/0:22,0:22:57.14:0,57,612	0/0:35,0:35:93.21:0,93,990	0/0:19,0:19:57.14:0,57,612	1/1:0,21:21:54.18:710,54,0	1/1:4,30:34:84.27:1105,84,0	0/0:16,0:16:39.10:0,39,419	0/0:21,0:20:54.13:0,54,580	0/0:36,0:36:99:0,105,1127	0/0:12,0:12:30.08:0,30,322
chr10	35273591	.	TTGAAACG	T	3035.99	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=10.742;DP=659;FS=4.427;HRun=0;HaplotypeScore=152.1002;InbreedingCoeff=0.9969;MQ=76.74;MQ0=0;MQRankSum=-11.036;QD=51.46;ReadPosRankSum=-2.353;VQSLOD=3.2084;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,129,5146	0/0:15,0:15:42.14:0,42,1695	0/0:23,0:23:66.04:0,66,2439	0/0:22,0:22:63.05:0,63,2225	0/0:27,0:27:81.26:0,81,3122	0/0:22,0:22:66.23:0,66,2527	0/0:22,0:22:66.23:0,66,2660	0/0:27,0:27:81.28:0,81,3111	0/0:26,0:26:78.25:0,78,2980	0/0:28,0:28:72.20:0,72,2692	0/0:24,0:24:66.21:0,66,2526	1/1:2,23:24:63.22:1656,63,0	0/0:19,0:19:57.20:0,57,2145	0/0:22,0:22:66.23:0,66,2521	0/0:28,0:28:81.26:0,81,3117	0/0:23,0:23:66.23:0,66,2612	0/0:35,0:35:99:0,102,3748	0/0:21,0:21:60.21:0,60,2323	0/0:26,0:26:72.25:0,72,2574	0/0:18,0:18:54.19:0,54,2062	0/0:44,0:44:99:0,129,5088	0/0:17,0:17:48.16:0,48,1936	1/1:4,15:19:44.67:977,45,0	1/1:1,14:15:29.97:545,30,0	0/0:26,0:26:75.26:0,75,2915	0/0:20,0:20:54.19:0,54,2109	0/0:15,0:15:42.14:0,42,1689	0/0:6,0:6:18.06:0,18,726
chr10	35273668	.	T	TAC	1881.79	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=4.798;DP=685;FS=0.000;HRun=0;HaplotypeScore=93.3453;InbreedingCoeff=0.9941;MQ=64.64;MQ0=0;MQRankSum=1.768;QD=32.44;ReadPosRankSum=1.413;VQSLOD=5.6503;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:87.23:0,87,1038	0/0:10,0:10:27.08:0,27,335	0/0:15,0:12:21.02:0,21,238	0/0:22,0:20:23.74:0,24,239	0/0:25,0:25:60.19:0,60,743	0/0:24,0:24:51.15:0,51,620	0/0:36,0:36:87.01:0,87,1053	0/0:47,0:47:93.22:0,93,1152	0/0:36,0:36:99:0,99,1188	0/0:28,0:30:72.01:0,72,868	0/0:26,0:26:60.14:0,60,718	1/1:10,15:24:51.17:833,51,0	0/0:18,0:19:41.96:0,42,496	0/0:17,0:17:42.13:0,42,520	0/0:21,0:22:57:0,57,670	0/0:28,0:28:72.21:0,72,880	0/0:21,0:21:60.16:0,60,728	0/0:18,0:18:45.14:0,45,557	0/0:27,0:27:60.19:0,60,743	0/0:19,0:20:57.01:0,57,683	0/0:35,0:35:75.22:0,75,916	0/0:11,0:11:27.08:0,27,335	1/1:3,18:21:54.18:872,54,0	1/1:6,6:12:20.96:319,21,0	0/0:27,0:27:75.24:0,75,929	0/0:35,0:35:84.26:0,84,1041	0/0:33,0:32:78.24:0,78,966	0/0:9,0:9:21.07:0,21,260
chr10	35273970	.	C	CTGTTT	4059.27	PASS	AB=1.000;AC=8;AF=0.143;AN=56;BaseQRankSum=-4.846;DP=739;FS=8.281;HRun=0;HaplotypeScore=136.3998;InbreedingCoeff=0.6749;MQ=66.20;MQ0=3;MQRankSum=0.036;QD=28.19;ReadPosRankSum=-3.106;VQSLOD=2.4686;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,117,2048	0/0:9,0:9:18.06:0,18,331	0/1:29,0:19:7.78:8,0,158	0/0:35,0:19:1.33:0,1,134	0/0:44,0:44:90.31:0,90,1649	0/0:17,0:17:33.10:0,33,572	0/0:22,0:22:48.13:0,48,848	0/0:32,0:32:33.23:0,33,624	0/0:18,0:18:39.13:0,39,717	0/0:31,0:31:63.22:0,63,1158	0/0:24,0:24:54.18:0,54,978	1/1:8,17:25:39.13:1106,39,0	0/0:17,0:17:33.08:0,33,544	0/0:20,0:20:45.15:0,45,820	0/0:21,0:21:39.13:0,39,717	0/0:14,0:14:36.11:0,36,632	0/0:24,0:24:54.15:0,54,925	0/1:23,0:23:29.24:29,0,831	0/0:24,0:21:33.07:0,33,544	0/0:23,0:23:48.16:0,48,875	0/0:39,0:39:78.24:0,78,1394	0/0:13,0:13:39.13:0,39,717	1/1:12,15:27:46.11:1173,46,0	1/1:12,27:40:63.22:1743,63,0	0/0:30,0:29:39.13:0,39,717	0/0:34,0:34:72.25:0,72,1317	0/0:35,0:34:66.23:0,66,1201	0/0:26,0:26:66.23:0,66,1213
chr10	35274522	.	G	GTTTTGTTTTGT	4047.71	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=-0.722;DP=690;FS=5.761;HRun=0;HaplotypeScore=212.4883;InbreedingCoeff=0.8157;MQ=67.38;MQ0=2;MQRankSum=-6.237;QD=43.06;ReadPosRankSum=-0.107;VQSLOD=2.7910;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,99,3088	0/0:14,0:14:36.07:0,36,975	0/1:22,0:18:18.79:19,0,404	0/0:21,0:19:7.89:0,8,484	0/0:28,0:28:78.22:0,78,2299	0/0:16,0:16:45.14:0,45,1351	0/0:22,0:22:60.21:0,60,1938	0/0:34,0:34:81.21:0,81,2005	0/0:20,0:20:54.17:0,54,1645	0/0:33,0:33:91.57:0,92,2669	0/0:15,0:15:45.07:0,45,1395	1/1:5,14:26:33.58:1789,34,0	0/0:23,0:23:69.18:0,69,1899	0/0:19,0:19:54.15:0,54,1406	0/0:36,0:36:99:0,105,3094	0/0:34,0:34:99:0,102,2754	0/0:36,0:36:99:0,108,3009	0/0:25,0:25:66.97:0,67,1664	0/0:22,0:22:57.11:0,57,1300	0/0:20,0:20:59.98:0,60,1673	0/0:27,0:27:78.24:0,78,2346	0/0:19,0:19:57.19:0,57,1910	1/1:5,10:24:34.25:1295,34,0	1/1:2,8:22:18.06:945,18,0	0/0:25,0:25:72.21:0,72,2098	0/0:23,0:23:66.19:0,66,1903	0/0:38,0:37:99:0,105,2957	0/0:11,0:11:30.08:0,30,814
chr10	35275956	.	C	CTTTT	1072.91	PASS	AB=0.981;AC=31;AF=0.554;AN=56;BaseQRankSum=4.423;DP=447;FS=3.825;HRun=14;HaplotypeScore=87.7168;InbreedingCoeff=0.2378;MQ=49.67;MQ0=10;MQRankSum=-4.393;QD=3.42;ReadPosRankSum=-1.648;VQSLOD=-0.5891;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:26:16.96:0,17,388	0/1:9,0:9:2.60:26,0,3	0/0:17,0:7:1.80:0,2,6	0/0:11,0:4:5.21:0,5,51	0/0:14,0:15:17.50:0,17,193	0/1:13,0:13:4.08:4,0,13	0/1:15,0:16:10.18:10,0,30	0/1:36,0:34:16.48:153,0,16	0/0:10,0:12:14.43:0,14,156	0/1:17,0:16:7.35:79,0,7	1/1:16,0:15:5.55:31,6,0	1/1:3,1:11:14.84:194,15,0	1/1:6,0:7:7.36:26,7,0	1/1:11,0:11:5.71:22,6,0	1/1:14,0:15:16.19:99,16,0	0/0:11,0:11:23.85:0,24,292	0/0:27,0:29:53.30:0,53,612	0/1:25,0:24:25.27:25,0,58	0/1:26,0:25:29.23:119,0,29	1/1:14,0:13:11.94:59,12,0	0/0:10,0:8:1.81:0,2,35	1/1:7,0:6:3.90:22,4,0	1/1:11,4:17:8.93:109,9,0	1/1:3,4:9:6.02:116,6,0	0/1:8,0:9:5.37:35,0,5	0/1:21,0:20:50.76:51,0,52	1/1:24,0:23:7.92:27,8,0	1/1:7,0:6:5.67:42,6,0
chr10	35275970	.	T	TTC	4498.78	PASS	AB=0.792;AC=35;AF=0.625;AN=56;BaseQRankSum=-2.552;DP=429;FS=2.387;HRun=0;HaplotypeScore=64.9161;InbreedingCoeff=0.3898;MQ=46.53;MQ0=16;MQRankSum=-1.510;QD=14.06;ReadPosRankSum=-0.945;VQSLOD=4.4874;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:53.07:0,53,525	1/1:1,11:12:17.27:257,17,0	0/0:8,0:1:2.98:0,3,21	0/0:9,0:4:4.54:0,5,40	0/0:15,0:14:29.72:0,30,267	1/1:0,11:14:11.97:159,12,0	1/1:3,10:18:14.72:180,15,0	1/1:2,22:27:67.65:779,68,0	0/0:12,0:12:29.30:0,29,256	1/1:3,12:16:31.72:388,32,0	1/1:2,5:12:5.97:69,6,0	0/1:14,0:14:16.90:17,0,29	1/1:3,6:9:9.03:150,9,0	1/1:1,11:14:9.03:148,9,0	1/1:4,12:16:23.96:323,24,0	0/0:11,0:11:26.10:0,26,294	0/0:29,0:28:70.66:0,71,705	0/1:10,12:23:78.45:287,0,78	1/1:5,8:17:4.22:455,4,0	1/1:4,8:13:15:203,15,0	0/1:6,4:7:27.25:58,0,27	1/1:3,8:11:8.98:120,9,0	0/1:10,0:9:14.09:14,0,47	0/1:7,0:7:14.35:14,0,18	1/1:2,8:12:20.95:287,21,0	0/1:4,7:14:7.61:248,0,8	1/1:1,17:21:18.53:304,19,0	0/1:7,6:12:3.42:39,0,3
chr10	35276409	.	GTT	G	7698.54	PASS	AB=0.571;AC=43;AF=0.768;AN=56;BaseQRankSum=-2.181;DP=562;FS=1.886;HRun=13;HaplotypeScore=82.8714;InbreedingCoeff=0.8537;MQ=78.48;MQ0=2;MQRankSum=-2.559;QD=17.46;ReadPosRankSum=3.224;VQSLOD=4.3783;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:30:71.15:0,71,882	1/1:5,10:15:21:203,21,0	0/0:20,0:17:29.03:0,29,270	0/0:17,0:19:17.11:0,17,208	0/1:5,2:20:16.62:17,0,116	1/1:3,19:22:51.06:495,51,0	1/1:3,13:18:32.51:286,33,0	1/1:2,27:29:75.06:720,75,0	0/0:5,1:19:9.73:0,10,142	1/1:2,16:19:48.01:455,48,0	1/1:4,17:22:35.85:399,36,0	1/1:4,0:28:58.09:250,58,0	1/1:4,20:24:50.80:477,51,0	1/1:2,16:17:30.03:291,30,0	1/1:5,10:16:29.74:274,30,0	0/0:1,1:17:9.35:0,9,108	0/0:1,0:16:37.92:0,38,142	1/1:2,12:17:38:309,38,0	1/1:3,11:15:29.56:300,30,0	1/1:4,22:27:53.73:504,54,0	1/1:2,16:20:38.01:426,38,0	1/1:1,21:25:59.24:530,59,0	1/1:4,0:23:49.39:214,49,0	1/1:0,0:9:16.47:71,16,0	1/1:6,15:21:42.04:407,42,0	1/1:4,15:20:50.79:473,51,0	1/1:3,16:19:39.03:378,39,0	1/1:2,10:13:5.20:220,5,0
chr10	35276877	.	A	AAAGGAAGG	564.08	PASS	AC=10;AF=0.208;AN=48;BaseQRankSum=2.548;DP=582;FS=9.078;HRun=0;HaplotypeScore=138.5397;InbreedingCoeff=0.8390;MQ=54.85;MQ0=9;MQRankSum=-1.671;QD=4.48;ReadPosRankSum=0.011;VQSLOD=2.1753;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:27:1.55:0,2,4	./.	./.	./.	0/0:20,0:20:18.05:0,18,370	0/0:26,0:25:27.07:0,27,569	0/0:19,0:19:12.02:0,12,226	1/1:24,0:22:1.82:5,2,0	0/0:25,0:25:45.11:0,45,934	0/0:19,0:18:27.09:0,27,618	0/0:19,0:19:27.08:0,27,615	1/1:21,15:39:9.03:364,9,0	1/1:14,0:21:14.46:104,14,0	0/0:23,0:23:39.09:0,39,803	0/0:28,0:28:39.11:0,39,841	0/0:31,0:31:48.12:0,48,865	0/0:17,0:17:27.04:0,27,516	0/0:19,0:19:26.37:0,26,802	0/0:21,0:21:9.02:0,9,173	0/0:18,0:18:14.97:0,15,265	0/0:28,0:27:42.12:0,42,891	1/1:11,0:21:11.88:84,12,0	./.	1/1:15,0:21:7.56:150,8,0	0/0:21,0:20:33.03:0,33,708	0/0:24,0:24:36:0,36,678	0/0:20,0:20:30.08:0,30,623	0/0:8,0:8:18.06:0,18,407
chr10	35277234	.	G	GGA	10231.99	PASS	AB=0.579;AC=41;AF=0.732;AN=56;BaseQRankSum=6.463;DP=402;FS=4.537;HRun=0;HaplotypeScore=65.3182;InbreedingCoeff=0.8784;MQ=52.47;MQ0=13;MQRankSum=-2.188;QD=38.61;ReadPosRankSum=2.013;VQSLOD=7.0220;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:33:93.19:0,93,1386	1/1:1,3:4:12.04:214,12,0	0/0:9,0:6:16.60:0,17,215	0/0:16,0:13:36.12:0,36,557	0/0:24,0:23:66.06:0,66,924	1/1:0,10:10:18.06:362,18,0	0/1:3,8:9:0.88:285,0,1	1/1:5,16:20:0.06:808,0,0	0/0:11,0:11:33.01:0,33,453	1/1:6,11:16:18.37:663,18,0	1/1:1,14:15:41.96:731,42,0	1/1:1,9:9:24.08:480,24,0	1/1:0,12:12:27.09:504,27,0	1/1:2,8:10:20.99:377,21,0	1/1:4,11:13:27.09:545,27,0	0/0:8,0:8:24.08:0,24,386	0/0:33,0:33:99:0,99,1518	1/1:3,10:13:12.22:545,12,0	1/1:4,12:14:36.06:618,36,0	1/1:3,12:15:32.66:564,33,0	1/1:1,7:7:12.04:242,12,0	1/1:0,8:8:18.06:361,18,0	1/1:2,7:8:15.05:279,15,0	1/1:2,10:11:24.08:456,24,0	1/1:4,8:10:24.03:439,24,0	1/1:2,19:23:51.03:785,51,0	1/1:1,9:11:23.97:439,24,0	1/1:2,7:10:30.02:537,30,0
chr10	35277276	.	G	GA	2218.91	PASS	AB=0.799;AC=34;AF=0.607;AN=56;BaseQRankSum=5.500;DP=346;FS=18.916;HRun=11;HaplotypeScore=103.3163;InbreedingCoeff=0.2105;MQ=56.11;MQ0=3;MQRankSum=-7.562;QD=8.81;ReadPosRankSum=-2.635;VQSLOD=0.3195;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:27:30.29:0,30,291	0/1:3,1:5:14.03:33,0,14	0/1:12,0:5:0.73:1,0,20	0/0:14,0:10:5.89:0,6,46	0/1:11,1:13:6.56:7,0,138	0/1:12,3:15:5.11:114,0,5	0/0:4,1:4:2.66:0,3,22	1/1:8,3:7:11.61:102,12,0	0/0:9,0:9:17.83:0,18,133	0/1:7,9:17:14.47:238,0,14	0/1:9,5:14:25.43:131,0,25	1/1:8,4:11:19.28:155,19,0	0/1:7,2:11:4.55:98,0,5	1/1:9,4:13:25.13:184,25,0	1/1:9,4:13:23.64:190,24,0	0/0:11,0:11:17.60:0,18,138	0/0:24,1:27:14.02:0,14,281	1/1:5,3:7:11.24:97,11,0	0/1:12,3:15:11.33:97,0,11	0/1:14,6:21:6.15:276,0,6	1/1:5,1:6:2.84:14,3,0	1/1:8,0:8:7.71:39,8,0	1/1:6,2:8:13.58:94,14,0	1/1:4,1:5:3.01:31,3,0	1/1:3,7:10:20.74:190,21,0	0/1:9,3:12:9.93:81,0,10	1/1:10,2:12:8.11:56,8,0	1/1:5,5:10:0.78:164,1,0
chr10	35277291	.	C	CAAA	3623.09	PASS	AB=0.975;AC=42;AF=0.750;AN=56;BaseQRankSum=2.829;DP=358;FS=1.285;HRun=13;HaplotypeScore=81.5673;InbreedingCoeff=0.7327;MQ=61.80;MQ0=3;MQRankSum=-4.905;QD=14.55;ReadPosRankSum=-1.773;VQSLOD=1.8249;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:26:47.60:0,48,487	1/1:1,3:4:9.03:161,9,0	0/0:16,0:8:9.83:0,10,67	0/1:18,0:12:23.78:24,0,31	0/0:13,0:15:20.74:0,21,189	1/1:10,3:16:38.42:484,38,0	1/1:5,2:6:12:152,12,0	1/1:11,1:11:16.23:135,16,0	0/0:10,0:10:7.42:0,7,108	1/1:14,6:20:33.02:476,33,0	1/1:11,1:12:15.02:177,15,0	1/1:11,0:10:11.98:138,12,0	1/1:8,1:9:11.94:144,12,0	1/1:13,2:15:30.29:259,30,0	1/1:8,0:9:12.85:143,13,0	0/0:11,0:13:19.40:0,19,235	0/0:28,0:29:27.09:0,27,408	1/1:4,0:3:4.97:18,5,0	1/1:14,1:18:25.62:196,26,0	1/1:12,3:17:23.71:305,24,0	1/1:4,0:4:2.22:7,2,0	1/1:5,0:8:12.99:105,13,0	1/1:10,0:9:8.21:52,8,0	0/1:5,0:5:0:0,0,0	1/1:6,6:13:12.04:189,12,0	1/1:11,1:13:20.65:189,21,0	1/1:6,1:7:9.89:84,10,0	1/1:8,5:14:12.04:187,12,0
chr10	35278043	.	A	AACACACACAC	7383.73	PASS	AB=1.000;AC=49;AF=0.980;AN=50;BaseQRankSum=-5.944;DP=503;FS=5.819;HRun=0;HaplotypeScore=200.7797;InbreedingCoeff=-0.1054;MQ=61.02;MQ0=9;MQRankSum=2.029;QD=16.37;ReadPosRankSum=4.139;VQSLOD=3.4750;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:34,0:28:1.09:97,1,0	1/1:7,0:7:3.01:148,3,0	./.	./.	./.	1/1:12,0:12:6.02:164,6,0	1/1:24,0:24:17.60:485,18,0	1/1:19,0:17:7.58:175,8,0	1/1:11,0:11:7.22:389,7,0	1/1:16,0:16:12.92:356,13,0	1/1:15,0:15:2.97:20,3,0	1/1:21,0:24:4.44:231,4,0	1/1:13,0:17:10.94:329,11,0	1/1:13,0:13:14.08:461,14,0	1/1:28,0:28:10.11:474,10,0	1/1:19,0:19:20.24:662,20,0	0/1:25,0:25:24.03:119,0,24	1/1:10,0:9:3.01:131,3,0	1/1:21,0:20:14.41:437,14,0	1/1:17,0:17:12.04:361,12,0	1/1:17,0:17:3.40:108,3,0	1/1:14,0:13:3.01:141,3,0	1/1:17,0:17:14.09:369,14,0	1/1:30,0:26:8.39:304,8,0	1/1:15,0:15:6.02:251,6,0	1/1:19,0:19:22.63:611,23,0	1/1:20,0:19:8:275,8,0	1/1:5,1:6:7.55:286,8,0
chr10	35278321	.	T	TCCCAGG	33972.30	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-5.550;DP=501;FS=10.592;HRun=0;HaplotypeScore=96.4867;InbreedingCoeff=0.9332;MQ=68.77;MQ0=0;MQRankSum=-10.290;QD=75.66;ReadPosRankSum=1.525;VQSLOD=5.6996;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:78.24:0,78,1819	1/1:1,5:8:12:355,12,0	0/0:16,0:16:38.12:0,38,722	0/0:9,0:9:17.22:0,17,447	1/1:3,14:18:33.11:1210,33,0	1/1:0,7:9:12.04:449,12,0	1/1:5,18:26:45.15:1655,45,0	1/1:7,20:30:84.25:2597,84,0	1/1:4,15:22:42.10:1472,42,0	1/1:2,12:19:54.05:1514,54,0	1/1:2,15:18:39.13:1437,39,0	1/1:2,14:20:42.10:1460,42,0	1/1:1,15:17:45.15:1683,45,0	1/1:3,12:15:39.13:1433,39,0	1/1:2,12:15:42.02:1545,42,0	1/1:3,12:17:33.11:1224,33,0	1/1:4,13:18:33.11:1213,33,0	1/1:1,8:10:24.08:890,24,0	1/1:7,17:25:72.22:2300,72,0	1/1:2,15:22:47.90:1330,48,0	1/1:4,8:15:14.90:469,15,0	1/1:1,13:14:36.12:1313,36,0	1/1:0,14:18:32.90:1211,33,0	1/1:4,12:21:36.12:1319,36,0	1/1:1,14:18:39.13:1441,39,0	1/1:3,22:25:72.25:2571,72,0	1/1:3,14:22:45.15:1659,45,0	1/1:0,4:5:6.02:225,6,0
chr10	35278551	.	A	ATGAT	47810.60	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-7.413;DP=743;FS=2.937;HRun=0;HaplotypeScore=105.6768;InbreedingCoeff=0.9976;MQ=78.01;MQ0=2;MQRankSum=-10.332;QD=68.11;ReadPosRankSum=5.135;VQSLOD=6.6603;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,49:56:99:3560,135,0	1/1:2,11:14:33.11:903,33,0	0/0:24,0:24:69.21:0,69,1271	0/0:17,0:17:44.34:0,44,833	1/1:4,23:29:58.31:1247,58,0	1/1:0,15:17:42.14:1149,42,0	1/1:2,23:27:66.23:1806,66,0	1/1:13,22:36:96.30:2454,96,0	1/1:3,21:24:57.20:1546,57,0	1/1:4,15:20:54.19:1436,54,0	1/1:5,27:32:84.29:2268,84,0	1/1:1,40:42:99:2859,105,0	1/1:5,24:29:81.21:2107,81,0	1/1:0,16:17:48.16:1313,48,0	1/1:1,35:36:96.33:2627,96,0	1/1:2,25:28:75.26:2052,75,0	1/1:1,30:31:87.30:2367,87,0	1/1:1,13:17:33.11:904,33,0	1/1:5,16:24:72.20:1728,72,0	1/1:0,24:27:78.18:1962,78,0	1/1:2,16:20:48.16:1289,48,0	1/1:1,25:26:72.25:1928,72,0	1/1:2,19:21:60.21:1570,60,0	1/1:3,25:28:63.22:1717,63,0	1/1:1,20:21:54.19:1447,54,0	1/1:4,27:31:90.31:2366,90,0	1/1:5,29:37:99:2631,99,0	1/1:3,6:8:21.07:575,21,0
chr10	35279488	.	A	AACCCC	12857.09	PASS	AB=1.000;AC=39;AF=0.696;AN=56;BaseQRankSum=-1.131;DP=404;FS=7.558;HRun=0;HaplotypeScore=117.0372;InbreedingCoeff=0.7011;MQ=47.99;MQ0=6;MQRankSum=-6.327;QD=49.64;ReadPosRankSum=3.468;VQSLOD=4.7309;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:42:73.36:0,73,1316	1/1:1,3:4:12.01:257,12,0	0/0:14,0:4:5.36:0,5,33	0/0:7,0:5:2.26:0,2,17	0/1:30,0:28:3.84:4,0,685	1/1:0,14:15:36.12:988,36,0	1/1:0,9:13:21.07:624,21,0	1/1:0,10:13:39.09:1129,39,0	0/1:15,0:16:1.36:1,0,429	1/1:0,8:11:30.10:929,30,0	1/1:1,4:6:18.06:491,18,0	0/0:12,0:14:17.02:0,17,446	1/1:3,8:11:33.11:879,33,0	1/1:2,11:12:36.12:997,36,0	1/1:5,6:11:27.08:669,27,0	0/0:19,0:20:42.13:0,42,556	0/0:26,0:30:69.69:0,70,942	1/1:2,14:18:6.49:1221,6,0	1/1:5,8:13:39.08:990,39,0	1/1:0,10:11:24:527,24,0	1/1:1,4:5:15:302,15,0	1/1:0,11:13:33.11:740,33,0	0/0:13,0:13:8.42:0,8,337	0/1:16,0:16:10.81:11,0,378	1/1:0,8:8:15.05:432,15,0	1/1:5,7:10:30.10:782,30,0	1/1:5,7:12:33.10:799,33,0	1/1:1,1:1:3.01:83,3,0
chr10	35279502	.	A	ACCCCCCC	13225.88	PASS	AB=0.864;AC=34;AF=0.607;AN=56;BaseQRankSum=3.903;DP=462;FS=2.754;HRun=0;HaplotypeScore=179.3996;InbreedingCoeff=0.8190;MQ=50.71;MQ0=9;MQRankSum=-8.513;QD=64.52;ReadPosRankSum=6.481;VQSLOD=4.7709;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:53:99:0,148,3562	1/1:5,0:5:15.05:338,15,0	0/0:34,0:12:29.94:0,30,559	0/0:24,0:9:10.93:0,11,153	0/0:28,0:26:66.21:0,66,1554	1/1:14,0:14:39.02:958,39,0	1/1:9,0:9:23.15:501,23,0	1/1:15,1:15:40.91:1249,41,0	0/0:16,0:15:39.12:0,39,875	1/1:11,1:12:36.12:1009,36,0	1/1:7,1:9:20.58:586,21,0	0/0:19,0:19:54.17:0,54,1266	0/1:14,1:18:28.69:888,0,29	0/1:9,1:10:17.92:465,0,18	1/1:6,1:7:17.27:344,17,0	0/0:19,0:18:39.13:0,39,991	0/0:37,0:36:85.84:0,86,2044	1/1:17,0:16:48.16:1089,48,0	1/1:11,0:11:11.31:760,11,0	1/1:9,1:10:26.94:709,27,0	1/1:8,0:7:14.93:413,15,0	1/1:14,0:14:39.02:1126,39,0	0/0:9,0:9:27.09:0,27,666	0/0:16,0:16:39.61:0,40,959	1/1:10,0:10:26.02:656,26,0	1/1:14,2:17:39.92:1046,40,0	1/1:15,0:15:38.56:937,39,0	1/1:3,0:2:6.02:153,6,0
chr10	35280060	.	CGTGTGTGT	C	436.50	PASS	AB=0.940;AC=10;AF=0.192;AN=52;BaseQRankSum=1.826;DP=646;FS=54.117;HRun=0;HaplotypeScore=157.0400;InbreedingCoeff=0.1090;MQ=63.96;MQ0=18;MQRankSum=-1.179;QD=3.01;ReadPosRankSum=0.273;VQSLOD=0.6221;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:44:24.08:0,24,330	0/1:8,1:9:70.54:71,0,86	./.	./.	0/0:24,0:24:2.99:0,3,24	0/1:17,0:19:56.09:56,0,62	0/1:24,0:23:34.89:52,0,35	0/0:26,0:26:1.25:0,1,3	1/1:17,3:20:2.59:73,3,0	0/0:22,0:22:8.86:0,9,71	0/0:10,0:10:6:0,6,71	0/0:28,0:27:26.86:0,27,337	0/0:9,0:9:9.03:0,9,128	0/0:25,0:29:12.04:0,12,275	0/0:23,0:21:15.03:0,15,287	0/1:18,0:15:6.66:7,0,12	1/1:21,5:26:11.90:232,12,0	0/0:25,0:25:28.57:0,29,311	0/0:31,0:32:12.04:0,12,254	0/0:15,0:15:3.01:0,3,49	0/0:42,0:42:24.98:0,25,337	0/0:13,0:14:11.79:0,12,96	0/1:14,0:14:19.71:20,0,175	0/0:36,0:36:11.95:0,12,148	0/1:12,1:15:62.24:62,0,154	0/0:19,0:19:6.48:0,6,101	0/0:21,0:20:15.87:0,16,206	0/0:9,0:9:12.45:0,12,100
chr10	35280530	.	CG	C	13483.90	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=11.340;DP=677;FS=2.506;HRun=4;HaplotypeScore=71.4795;InbreedingCoeff=0.9992;MQ=78.62;MQ0=0;MQRankSum=-0.495;QD=31.88;ReadPosRankSum=2.541;VQSLOD=5.5854;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,138,1929	1/1:0,12:12:33.10:396,33,0	0/0:22,0:22:30.01:0,30,652	0/0:14,0:14:36.99:0,37,474	0/0:23,0:23:69.22:0,69,947	1/1:0,28:28:81.25:972,81,0	1/1:1,22:23:60.18:720,60,0	1/1:2,22:24:63.18:743,63,0	0/0:27,0:27:81.23:0,81,1106	1/1:1,31:32:48.24:988,48,0	1/1:0,13:13:36.11:432,36,0	0/0:25,0:25:75.25:0,75,1038	1/1:0,26:26:69.18:827,69,0	1/1:2,26:28:66.20:792,66,0	1/1:1,19:20:54.17:648,54,0	0/0:16,0:16:48.16:0,48,661	0/0:36,0:36:99:0,102,1423	1/1:1,22:23:60.18:720,60,0	1/1:4,26:30:78.22:923,78,0	1/1:3,20:23:54.16:648,54,0	1/1:1,45:46:99:1512,126,0	1/1:1,21:22:60.18:720,60,0	0/0:12,0:12:33.11:0,33,461	0/0:29,0:29:78.20:0,78,1052	1/1:0,19:19:51.16:612,51,0	1/1:1,26:27:78.24:935,78,0	1/1:0,20:20:54.17:646,54,0	1/1:0,7:7:21.06:252,21,0
chr10	35281092	.	TCTCTCTCC	T	3749.44	PASS	AB=1.000;AC=47;AF=0.904;AN=52;BaseQRankSum=-4.192;DP=497;FS=0.000;HRun=0;HaplotypeScore=104.5780;InbreedingCoeff=0.1044;MQ=53.22;MQ0=43;MQRankSum=3.131;QD=8.17;ReadPosRankSum=0.759;VQSLOD=2.0254;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:35,0:35:34.29:334,34,0	1/1:2,0:2:3:25,3,0	0/1:19,0:7:10.94:23,0,11	0/1:43,0:11:2.17:2,0,23	./.	1/1:20,0:16:26.86:223,27,0	1/1:29,0:26:0.09:33,0,0	1/1:12,0:11:23.77:171,24,0	0/1:14,0:13:44.95:45,0,74	1/1:26,0:24:42.81:449,43,0	1/1:18,0:17:11.91:93,12,0	1/1:7,0:5:5.03:49,5,0	1/1:19,0:18:37.62:274,38,0	1/1:18,0:17:2.48:15,2,0	1/1:11,0:11:11.83:100,12,0	1/1:13,0:12:4.54:94,5,0	1/1:10,0:9:3.10:86,3,0	1/1:18,0:15:18.85:321,19,0	1/1:7,0:6:12.29:90,12,0	1/1:14,0:13:17.89:134,18,0	1/1:30,0:26:22.70:194,23,0	1/1:17,0:16:20.98:176,21,0	./.	1/1:17,0:14:17.98:151,18,0	1/1:24,0:24:15.98:118,16,0	1/1:21,0:20:5:324,5,0	0/0:2,23:25:0.27:0,0,2	1/1:15,0:11:32.32:225,32,0
chr10	35281094	.	TCTCTCC	T	3897.73	PASS	AB=1.000;AC=48;AF=0.889;AN=54;BaseQRankSum=-3.875;DP=485;FS=0.966;HRun=0;HaplotypeScore=92.0756;InbreedingCoeff=0.0233;MQ=52.94;MQ0=44;MQRankSum=3.841;QD=8.51;ReadPosRankSum=1.047;VQSLOD=2.0323;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:35,0:35:41.40:376,41,0	1/1:2,0:2:3:25,3,0	0/1:15,0:4:10.94:23,0,11	0/1:41,0:10:13.78:14,0,19	1/1:13,0:11:2.97:20,3,0	1/1:20,0:16:26.93:223,27,0	1/1:8,19:24:0.09:29,0,0	1/1:11,0:10:23.83:177,24,0	0/1:15,0:14:45.86:64,0,46	1/1:26,0:24:27.94:455,28,0	1/1:18,0:17:11.89:93,12,0	1/1:6,0:4:8.94:69,9,0	1/1:19,0:18:38.34:285,38,0	1/1:18,0:17:0.88:3,1,0	1/1:11,0:11:11.73:99,12,0	1/1:13,0:12:7.46:118,7,0	1/1:9,0:8:3.52:87,4,0	1/1:18,0:15:24.75:262,25,0	1/1:6,0:5:12.29:90,12,0	1/1:14,0:13:17.89:134,18,0	1/1:29,0:25:23.07:185,23,0	1/1:16,0:15:23.94:195,24,0	./.	1/1:15,0:12:17.98:151,18,0	1/1:24,0:24:18.21:142,18,0	0/1:20,0:19:15.83:323,0,16	0/0:25,0:25:0.26:0,0,1	1/1:17,0:13:37.55:256,38,0
chr10	35281096	.	TCTCC	T	4040.93	PASS	AB=1.000;AC=47;AF=0.870;AN=54;BaseQRankSum=-4.062;DP=479;FS=0.934;HRun=0;HaplotypeScore=83.4357;InbreedingCoeff=0.0060;MQ=53.05;MQ0=45;MQRankSum=4.523;QD=8.90;ReadPosRankSum=0.518;VQSLOD=2.5821;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:36,0:35:40.88:396,41,0	1/1:3,0:3:5.99:48,6,0	0/1:11,0:4:10.94:23,0,11	0/1:40,0:10:6.77:7,0,20	1/1:13,0:11:2.97:20,3,0	1/1:20,0:16:26.91:223,27,0	1/1:26,0:23:0.02:13,0,0	1/1:10,0:9:23.86:180,24,0	0/1:15,0:14:20.36:64,0,20	1/1:27,0:25:33.66:490,34,0	1/1:19,0:18:14.56:117,15,0	0/1:7,0:5:3.95:57,0,4	1/1:19,0:18:38.32:285,38,0	1/1:3,15:17:2.66:22,3,0	1/1:11,0:11:11.45:99,11,0	1/1:11,0:10:7.28:118,7,0	1/1:10,0:9:6.95:110,7,0	1/1:18,0:15:36.27:290,36,0	1/1:7,0:6:6.35:81,6,0	1/1:14,0:13:17.89:134,18,0	1/1:29,0:24:16.24:170,16,0	1/1:17,0:16:26.94:219,27,0	./.	1/1:15,0:13:17.82:150,18,0	1/1:22,0:22:18.21:142,18,0	0/1:19,0:18:4.52:323,0,5	0/0:24,0:24:0.25:0,0,1	1/1:17,0:13:37.57:257,38,0
chr10	35281098	.	TCC	T	4315.97	PASS	AB=0.991;AC=51;AF=0.944;AN=54;BaseQRankSum=-4.165;DP=472;FS=3.200;HRun=3;HaplotypeScore=74.0626;InbreedingCoeff=0.1087;MQ=53.26;MQ0=45;MQRankSum=5.498;QD=9.16;ReadPosRankSum=1.874;VQSLOD=1.8777;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:37,0:36:47.51:424,48,0	1/1:2,0:2:5.99:48,6,0	0/1:9,0:4:10.94:23,0,11	0/1:34,0:10:4.54:5,0,18	1/1:7,6:11:2.97:20,3,0	1/1:19,0:15:26.94:223,27,0	1/1:26,0:23:0.02:13,0,0	1/1:10,0:9:23.87:180,24,0	1/1:17,0:16:4.31:99,4,0	1/1:26,0:24:44.78:503,45,0	1/1:19,0:18:14.87:118,15,0	1/1:9,0:7:2.03:100,2,0	1/1:20,0:19:41.08:297,41,0	1/1:17,0:16:2.51:13,3,0	1/1:11,0:11:14.38:124,14,0	1/1:11,0:10:7.38:119,7,0	1/1:10,0:9:6.42:110,6,0	1/1:18,0:15:36.45:264,36,0	1/1:9,0:8:1.47:73,1,0	1/1:12,0:11:17.89:134,18,0	1/1:28,0:23:19.24:194,19,0	1/1:15,0:14:26.94:219,27,0	./.	1/1:17,0:15:26.94:224,27,0	1/1:22,0:22:24.18:187,24,0	1/1:18,0:17:21.27:344,21,0	0/1:24,0:24:0.20:0,0,1	1/1:17,0:13:37.58:258,38,0
chr10	35281481	.	TG	T	5100.39	PASS	AB=1.000;AC=43;AF=0.768;AN=56;BaseQRankSum=5.467;DP=525;FS=26.015;HRun=12;HaplotypeScore=129.2100;InbreedingCoeff=0.8585;MQ=62.75;MQ0=9;MQRankSum=-1.105;QD=11.67;ReadPosRankSum=8.670;VQSLOD=1.9462;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:30:2.49:2,0,16	1/1:4,11:15:32.24:253,32,0	0/0:24,0:14:13.03:0,13,121	0/0:19,0:16:8.86:0,9,65	0/0:8,0:8:5.12:0,5,28	1/1:3,12:15:34.91:276,35,0	1/1:4,20:23:53.22:415,53,0	1/1:9,12:20:28.81:221,29,0	0/0:5,0:5:5.99:0,6,48	1/1:2,16:19:49.29:355,49,0	1/1:5,9:14:20.20:161,20,0	1/1:4,0:14:20.29:58,20,0	1/1:4,14:22:49.92:380,50,0	1/1:0,12:10:28.93:213,29,0	1/1:6,9:15:20.51:161,21,0	0/0:13,0:13:16.56:0,17,109	0/0:18,0:18:32.97:0,33,264	1/1:7,3:12:10.57:85,11,0	1/1:4,4:11:19.51:130,20,0	1/1:7,10:20:27.39:212,27,0	1/1:11,25:37:66.16:520,66,0	1/1:5,11:13:22.80:183,23,0	1/1:3,0:20:21.86:64,22,0	1/1:5,0:31:45.68:131,46,0	1/1:3,13:18:39.12:283,39,0	1/1:8,19:31:65.99:475,66,0	1/1:6,16:23:51.41:392,51,0	1/1:0,5:10:17.84:128,18,0
chr10	35281482	.	G	GT	6085.05	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=0.469;DP=522;FS=21.654;HRun=1;HaplotypeScore=130.8963;InbreedingCoeff=0.9209;MQ=62.65;MQ0=9;MQRankSum=-0.849;QD=13.99;ReadPosRankSum=7.739;VQSLOD=2.5277;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:17,10:29:53.96:585,54,0	1/1:14,0:14:36.72:203,37,0	0/0:23,0:13:4.57:0,5,163	0/0:19,0:15:21.92:0,22,159	0/0:8,0:8:8.12:0,8,53	1/1:15,1:15:40.71:242,41,0	1/1:25,1:24:60.03:341,60,0	1/1:18,1:17:40.79:257,41,0	0/0:5,0:5:8.99:0,9,74	1/1:20,0:19:55.48:335,55,0	1/1:14,0:14:31.51:183,32,0	1/1:14,0:14:31.34:172,31,0	1/1:22,0:22:56.45:332,56,0	1/1:13,0:10:14.55:147,15,0	1/1:16,0:16:32.50:200,33,0	0/0:14,0:14:19.56:0,20,135	0/0:18,0:18:41.98:0,42,363	1/1:12,0:12:32.35:220,32,0	1/1:13,0:12:7.84:115,8,0	1/1:20,0:20:27.27:235,27,0	1/1:38,0:38:94.47:588,94,0	1/1:15,1:13:37.81:238,38,0	1/1:20,0:20:34.15:185,34,0	1/1:30,0:30:68.37:357,68,0	1/1:18,0:18:19.39:230,19,0	1/1:31,0:31:54.86:488,55,0	1/1:23,1:23:45.50:330,45,0	1/1:10,0:10:17.49:102,17,0
chr10	35281483	.	G	GT	4127.99	PASS	AB=0.791;AC=37;AF=0.661;AN=56;BaseQRankSum=-2.709;DP=522;FS=6.658;HRun=0;HaplotypeScore=136.5529;InbreedingCoeff=0.8609;MQ=61.62;MQ0=9;MQRankSum=-0.853;QD=11.04;ReadPosRankSum=3.150;VQSLOD=4.3193;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:25,9:34:40.43:167,0,40	1/1:14,0:14:33.18:193,33,0	0/0:21,0:11:29.57:0,30,290	0/0:17,0:13:13.47:0,13,126	0/0:8,0:8:10.91:0,11,83	1/1:16,0:15:40.20:224,40,0	1/1:25,0:23:55.17:282,55,0	1/1:20,0:18:27.97:200,28,0	0/0:5,0:5:12:0,12,104	1/1:20,0:19:48.23:271,48,0	1/1:14,0:14:20.07:142,20,0	0/0:15,0:15:27.75:0,28,135	1/1:22,0:22:44.87:240,45,0	1/1:13,0:10:10.86:89,11,0	1/1:14,0:14:26.46:144,26,0	0/0:14,0:14:20.76:0,21,145	0/0:18,0:18:45.35:0,45,392	1/1:12,0:12:27.92:175,28,0	1/1:13,0:12:1.03:78,1,0	1/1:20,0:20:26.64:213,27,0	1/1:38,0:38:70.03:471,70,0	1/1:16,0:13:34.79:204,35,0	0/0:20,0:20:30.85:0,31,147	0/0:30,0:30:67.14:0,67,317	1/1:18,0:18:18.11:209,18,0	1/1:31,0:31:48.63:429,49,0	1/1:24,0:23:44.66:311,45,0	1/1:10,0:10:16.32:84,16,0
chr10	35282245	.	GA	G	8462.79	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=12.682;DP=585;FS=2.774;HRun=8;HaplotypeScore=58.6598;InbreedingCoeff=0.9977;MQ=81.08;MQ0=0;MQRankSum=-1.154;QD=24.89;ReadPosRankSum=2.124;VQSLOD=5.7548;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,117,1411	1/1:1,8:9:21.03:203,21,0	0/0:16,0:16:24.06:0,24,265	0/0:20,0:19:30.14:0,30,378	0/0:20,0:20:54.16:0,54,649	1/1:3,14:17:39.06:377,39,0	1/1:5,13:18:36.05:348,36,0	1/1:3,31:34:93.12:888,93,0	0/0:23,0:23:63.19:0,63,761	1/1:0,19:19:57.09:551,57,0	1/1:0,16:16:45.07:435,45,0	0/0:25,0:25:69.20:0,69,824	1/1:0,18:18:48.08:464,48,0	1/1:3,13:16:36.05:348,36,0	1/1:3,17:20:48.07:464,48,0	0/0:19,0:19:54.15:0,54,641	0/0:36,0:36:99:0,105,1241	1/1:0,13:13:39.06:377,39,0	1/1:1,21:22:63.08:601,63,0	1/1:0,23:23:66.10:637,66,0	1/1:1,19:20:48.07:464,48,0	1/1:3,20:23:54.08:522,54,0	0/0:20,0:20:42.12:0,42,496	0/0:24,0:24:72.22:0,72,869	1/1:3,17:20:45.07:434,45,0	1/1:1,21:22:63.10:608,63,0	1/1:1,23:24:60.06:571,60,0	1/1:0,6:6:18.03:174,18,0
chr10	35283138	.	GA	G	607.96	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-1.728;DP=637;FS=0.621;HRun=10;HaplotypeScore=91.9607;InbreedingCoeff=0.8282;MQ=74.58;MQ0=1;MQRankSum=-1.845;QD=19.61;ReadPosRankSum=0.574;VQSLOD=4.0550;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,31:31:80.98:703,81,0	0/0:19,0:19:45.10:0,45,481	0/0:31,1:23:31.83:0,32,349	0/0:26,0:18:12.95:0,13,345	0/0:30,1:31:77.45:0,77,797	0/0:25,1:28:48.80:0,49,724	0/0:15,0:15:39.11:0,39,431	0/0:37,1:38:57.90:0,58,841	0/0:16,0:16:36.08:0,36,386	0/0:28,2:30:49.12:0,49,757	0/0:14,0:14:36.10:0,36,398	0/0:20,1:21:34.15:0,34,605	0/0:20,0:21:56.99:0,57,611	0/0:10,0:10:18.04:0,18,192	0/0:27,0:27:75.17:0,75,811	0/0:16,0:17:44.95:0,45,478	0/0:38,0:38:87.20:0,87,939	0/0:22,1:23:5:0,5,487	0/0:16,0:16:19.14:0,19,392	0/0:20,0:20:45.58:0,46,490	0/0:12,0:12:11.17:0,11,300	0/0:27,0:27:75.18:0,75,811	0/0:19,1:20:31.13:0,31,562	0/0:10,0:11:23.88:0,24,237	0/0:29,0:29:60.15:0,60,656	0/0:16,0:16:44.15:0,44,470	0/0:31,0:31:93.24:0,93,1019	0/0:18,0:18:54.15:0,54,596
chr10	35287879	.	A	AG	30180.26	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-7.943;DP=735;FS=7.953;HRun=0;HaplotypeScore=69.9613;InbreedingCoeff=0.9996;MQ=88.53;MQ0=0;MQRankSum=-11.072;QD=44.12;ReadPosRankSum=6.036;VQSLOD=4.6839;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,26:27:63.21:1007,63,0	1/1:0,12:12:33.11:527,33,0	0/0:32,0:32:77.32:0,77,1038	0/0:19,0:19:51.15:0,51,671	1/1:0,38:38:99:1724,108,0	1/1:0,40:40:99:1726,108,0	1/1:0,27:27:75.26:1199,75,0	1/1:1,26:27:78.24:1193,78,0	1/1:0,30:30:87.30:1390,87,0	1/1:0,27:27:81.25:1245,81,0	1/1:0,21:21:63.21:1007,63,0	1/1:0,17:17:45.15:719,45,0	1/1:0,26:26:72.25:1150,72,0	1/1:0,29:29:81.28:1294,81,0	1/1:0,32:33:84.29:1331,84,0	1/1:0,24:24:69.24:1103,69,0	1/1:1,24:25:72.25:1150,72,0	1/1:0,28:28:72.25:1151,72,0	1/1:0,25:25:75.23:1154,75,0	1/1:1,26:27:78.14:1178,78,0	1/1:0,33:33:93.32:1486,93,0	1/1:1,26:27:75.17:1167,75,0	1/1:0,34:34:99:1581,99,0	1/1:0,20:20:57.19:911,57,0	1/1:0,22:22:63.21:1007,63,0	1/1:1,29:30:87.27:1345,87,0	1/1:2,22:23:60.20:958,60,0	1/1:0,11:11:30.10:479,30,0
chr10	35289052	.	GA	G	1156.50	PASS	AB=0.749;AC=8;AF=0.143;AN=56;BaseQRankSum=6.616;DP=580;FS=2.258;HRun=11;HaplotypeScore=64.1046;InbreedingCoeff=0.6168;MQ=77.60;MQ0=0;MQRankSum=-1.281;QD=9.33;ReadPosRankSum=2.190;VQSLOD=2.7618;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:15,42:57:87.03:609,0,87	0/0:5,0:5:15.02:0,15,147	0/0:27,1:26:9.10:0,9,286	0/0:13,0:11:11.77:0,12,124	0/1:22,2:24:12.26:12,0,451	0/0:28,1:29:50.55:0,51,742	0/0:30,4:34:40.93:0,41,839	0/0:22,0:26:57.89:0,58,577	0/0:17,0:19:53.81:0,54,519	0/0:24,0:24:54.12:0,54,561	0/0:10,0:11:23.89:0,24,237	1/1:2,14:16:3.97:239,4,0	0/0:17,1:19:26.30:0,26,456	0/0:16,0:17:44.93:0,45,448	0/0:18,1:19:20.45:0,20,409	0/0:20,0:21:47.95:0,48,494	0/0:38,1:39:86.47:0,86,1067	0/0:21,2:23:41.49:0,41,636	0/0:23,1:25:44.27:0,44,626	0/0:17,0:17:42.08:0,42,426	0/0:5,0:5:12.03:0,12,128	0/0:14,1:15:11.52:0,12,321	1/1:7,11:18:32.20:269,32,0	1/1:2,7:9:20.97:172,21,0	0/0:24,0:24:64.27:0,64,632	0/0:17,0:17:26.57:0,27,380	0/0:22,0:22:60.13:0,60,630	0/0:4,0:4:12.03:0,12,128
chr10	35289237	.	C	CG	13335.18	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-13.775;DP=619;FS=0.654;HRun=4;HaplotypeScore=57.6405;InbreedingCoeff=0.9991;MQ=79.72;MQ0=0;MQRankSum=-1.610;QD=34.02;ReadPosRankSum=0.013;VQSLOD=5.1765;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,111,1244	1/1:2,10:13:33.07:422,33,0	0/0:15,0:14:38.75:0,39,438	0/0:15,0:15:45.13:0,45,510	0/0:21,0:21:57.11:0,57,622	1/1:0,22:22:63.21:860,63,0	1/1:3,41:44:99:1433,105,0	1/1:2,25:27:74.91:843,75,0	0/0:19,0:19:54.15:0,54,612	1/1:5,13:17:36.12:490,36,0	1/1:0,13:13:30.10:410,30,0	0/0:22,0:22:66.19:0,66,748	1/1:2,20:22:48.16:656,48,0	1/1:3,16:19:51.17:695,51,0	1/1:2,14:16:42.14:574,42,0	0/0:19,0:18:54.15:0,54,612	0/0:42,0:42:99:0,123,1384	1/1:2,31:33:90.30:1231,90,0	1/1:4,13:17:42.13:558,42,0	1/1:2,11:13:36.02:435,36,0	1/1:2,57:59:99:2162,160,0	1/1:0,22:22:60.20:820,60,0	0/0:8,0:8:24.05:0,24,261	0/0:27,0:27:75.20:0,75,841	1/1:3,13:16:36.12:492,36,0	1/1:3,12:16:39.13:517,39,0	1/1:0,9:9:24.08:328,24,0	1/1:0,13:13:30.10:410,30,0
chr10	35289659	.	TGTGC	T	2452.78	PASS	AB=1.000;AC=33;AF=0.635;AN=52;BaseQRankSum=2.372;DP=411;FS=7.526;HRun=0;HaplotypeScore=79.1234;InbreedingCoeff=0.4504;MQ=62.59;MQ0=11;MQRankSum=-3.911;QD=10.31;ReadPosRankSum=0.914;VQSLOD=1.9200;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:41.79:0,42,398	1/1:3,0:3:8.99:75,9,0	0/0:26,0:18:20.22:0,20,268	0/0:22,0:16:28.54:0,29,270	0/1:9,0:9:17.86:18,0,33	1/1:9,0:8:3.01:44,3,0	0/1:18,0:18:27.22:175,0,27	1/1:13,0:12:17.88:137,18,0	0/0:22,0:20:14.48:0,14,175	1/1:16,0:16:42.02:426,42,0	./.	0/0:6,11:15:0:0,0,1	1/1:8,0:6:14.94:144,15,0	1/1:10,0:9:8.86:64,9,0	0/0:11,0:11:0:0,0,0	0/1:15,0:15:50.13:50,0,117	0/0:27,0:25:24.57:0,25,242	1/1:14,0:14:0.29:1,0,0	1/1:11,0:9:20.83:156,21,0	1/1:6,0:6:2.90:16,3,0	0/1:18,0:15:1.05:121,0,1	./.	1/1:11,0:10:17.96:146,18,0	1/1:25,1:24:44.97:500,45,0	0/1:16,0:15:11.98:12,0,19	1/1:14,0:12:32.98:310,33,0	1/1:8,0:7:14.91:112,15,0	1/1:13,0:12:14.92:116,15,0
chr10	35289663	.	CGTGCGTGTGT	C	2426.96	PASS	AB=0.903;AC=29;AF=0.558;AN=52;BaseQRankSum=-0.505;DP=408;FS=0.524;HRun=0;HaplotypeScore=110.2842;InbreedingCoeff=0.4298;MQ=57.52;MQ0=17;MQRankSum=-3.116;QD=11.18;ReadPosRankSum=-0.063;VQSLOD=2.1928;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:30:43.27:0,43,724	1/1:3,0:3:8.99:75,9,0	0/0:25,0:17:20.07:0,20,269	0/0:20,0:14:28.54:0,29,270	0/0:10,0:9:10.31:0,10,128	1/1:4,6:9:2.82:92,3,0	0/1:19,0:18:85.22:226,0,85	1/1:13,0:12:17.84:135,18,0	0/0:22,0:20:41.25:0,41,260	1/1:16,0:18:41.96:474,42,0	./.	0/0:16,0:14:0.94:0,1,1	1/1:7,0:6:4.61:237,5,0	1/1:9,0:8:8.86:64,9,0	0/0:0,11:11:0.47:0,0,1	0/1:18,0:18:22.29:22,0,156	0/0:26,0:24:39.61:0,40,350	0/0:2,12:14:3.21:0,3,39	1/1:10,0:8:20.74:153,21,0	1/1:2,0:5:2.90:16,3,0	0/1:18,0:15:20.72:121,0,21	./.	1/1:8,0:10:15.44:122,15,0	0/1:25,0:23:77.57:166,0,78	0/1:1,14:15:11.99:12,0,19	1/1:11,2:12:29.14:412,29,0	1/1:5,1:6:14.96:155,15,0	1/1:11,0:10:17.14:123,17,0
chr10	35289748	.	C	CAGAGAA	378.12	PASS	AB=1.000;AC=16;AF=0.308;AN=52;BaseQRankSum=3.383;DP=624;FS=17.259;HRun=0;HaplotypeScore=176.2973;InbreedingCoeff=0.1778;MQ=38.67;MQ0=48;MQRankSum=-1.195;QD=1.54;ReadPosRankSum=1.758;VQSLOD=1.9850;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:29:11.26:11,0,495	./.	0/0:27,0:7:10.96:0,11,105	0/1:35,0:6:9.68:10,0,14	1/1:22,0:18:18.36:184,18,0	0/0:22,0:19:2.91:0,3,24	0/0:31,0:30:2.10:0,2,6	0/0:63,0:59:55:0,55,329	0/1:27,0:23:3.73:110,0,4	0/0:36,0:33:0.70:0,1,147	0/0:11,0:10:5.93:0,6,40	0/0:19,0:17:3.40:0,3,25	1/1:21,0:18:0.56:4,1,0	0/0:18,0:16:0.34:0,0,1	0/0:17,0:17:0.67:0,1,22	1/1:9,10:24:4.32:23,4,0	0/1:21,0:18:29.87:59,0,30	0/0:9,0:7:11.43:0,11,98	0/0:31,0:22:29.64:0,30,176	0/1:10,0:9:0:0,0,0	./.	1/1:12,0:12:2.80:13,3,0	0/0:9,0:7:4.41:0,4,14	0/0:27,0:22:3.59:0,4,26	0/0:26,0:21:4.30:0,4,30	0/1:32,0:29:67.91:86,0,68	0/0:18,0:15:1.71:0,2,10	1/1:12,0:9:2.97:10,3,0
chr10	35289754	.	A	AAGAGAC	3894.41	PASS	AB=0.571;AC=49;AF=0.875;AN=56;BaseQRankSum=0.515;DP=622;FS=3.721;HRun=0;HaplotypeScore=163.1337;InbreedingCoeff=0.5777;MQ=40.96;MQ0=40;MQRankSum=-1.997;QD=7.45;ReadPosRankSum=-0.708;VQSLOD=2.7116;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:56.09:0,56,882	1/1:2,0:1:2.96:19,3,0	0/0:34,0:11:11.59:0,12,133	0/0:38,0:8:11.37:0,11,91	1/1:19,2:17:20.62:331,21,0	1/1:20,0:19:8.98:73,9,0	1/1:29,0:28:21.94:152,22,0	1/1:69,0:65:94.07:649,94,0	1/1:12,14:24:9.92:173,10,0	1/1:31,0:28:4.65:125,5,0	1/1:8,0:8:3.47:26,3,0	1/1:22,0:20:24.34:188,24,0	1/1:21,0:18:20.51:138,21,0	1/1:17,0:15:8.91:65,9,0	1/1:18,0:18:11.97:101,12,0	1/1:25,1:26:11.99:111,12,0	0/1:6,12:22:8.87:208,0,9	1/1:10,0:9:10.29:61,10,0	1/1:30,0:21:24.02:158,24,0	1/1:9,0:9:8.89:65,9,0	1/1:13,0:11:5.99:48,6,0	1/1:11,0:11:9:81,9,0	1/1:7,0:5:8.39:46,8,0	1/1:27,0:21:35.87:281,36,0	1/1:20,0:17:18.38:140,18,0	1/1:31,0:28:51.89:440,52,0	1/1:18,0:16:23.21:166,23,0	1/1:12,0:9:8.53:50,9,0
chr10	35289755	.	A	AGAGG	2064.48	PASS	AB=0.923;AC=9;AF=0.161;AN=56;BaseQRankSum=-0.253;DP=628;FS=2.031;HRun=0;HaplotypeScore=156.0625;InbreedingCoeff=-0.2235;MQ=41.04;MQ0=40;MQRankSum=-7.802;QD=7.70;ReadPosRankSum=0.296;VQSLOD=3.1081;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:60.48:0,60,1095	0/0:2,1:2:3.01:0,3,54	0/0:35,0:11:17.71:0,18,302	0/0:38,0:8:10.78:0,11,168	0/0:21,0:17:19.97:0,20,183	0/0:20,0:19:12.04:0,12,214	0/1:29,0:28:38.08:38,0,320	0/1:69,0:65:99:502,0,1789	0/1:27,0:24:6.90:7,0,116	0/1:29,2:28:99:671,0,540	0/0:7,1:8:9.03:0,9,165	0/0:22,0:20:27.06:0,27,433	0/1:19,2:18:70.95:71,0,301	0/0:13,4:15:8.87:0,9,130	0/1:17,1:18:40.83:41,0,247	0/0:26,0:26:14.73:0,15,204	0/0:24,0:22:11.71:0,12,147	0/0:10,0:9:23.95:0,24,310	0/1:30,0:22:99:152,0,634	0/0:9,0:9:8.94:0,9,98	0/0:11,1:10:6.02:0,6,103	0/0:11,0:11:9.03:0,9,144	0/0:7,0:5:9.03:0,9,167	0/0:29,0:23:39.10:0,39,636	0/0:20,1:18:14.45:0,14,369	0/1:25,6:28:99:649,0,668	0/0:18,2:18:23.77:0,24,347	0/1:6,6:9:69.50:69,0,97
chr10	35290666	.	AGCCCGCCCCGGGGC	A	19112.65	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=11.756;DP=410;FS=0.000;HRun=0;HaplotypeScore=185.3919;InbreedingCoeff=0.9169;MQ=66.97;MQ0=0;MQRankSum=-14.471;QD=79.97;ReadPosRankSum=-1.286;VQSLOD=3.9821;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,99,6194	1/1:1,1:2:5.75:138,6,0	0/0:8,0:8:17.72:0,18,398	0/0:7,0:7:15.01:0,15,225	0/0:5,0:5:15.03:0,15,833	1/1:2,12:13:33.06:1286,33,0	1/1:5,15:20:51.03:1701,51,0	1/1:5,11:16:45.11:1279,45,0	0/0:19,0:19:57.17:0,57,3595	1/1:2,9:10:27.08:979,27,0	1/1:0,2:2:3.01:130,3,0	0/0:15,0:15:42.14:0,42,2785	1/1:4,11:15:27.02:1051,27,0	1/1:4,15:19:54.02:1996,54,0	1/1:0,15:15:39.13:1686,39,0	0/0:6,0:6:18.05:0,18,1095	0/0:41,0:41:99:0,120,7787	1/1:3,16:19:39.09:1374,39,0	1/1:7,8:15:39.03:864,39,0	1/1:1,7:8:17.25:772,17,0	1/1:8,24:32:44.80:1579,45,0	1/1:1,8:9:6.02:259,6,0	0/0:2,0:2:6.02:0,6,427	0/0:33,0:33:99:0,99,6741	1/1:2,7:9:24.08:905,24,0	1/1:0,11:11:33.11:1263,33,0	1/1:5,10:15:42.10:1402,42,0	1/1:3,4:7:17.91:447,18,0
chr10	35290667	.	G	GT	2247.57	PASS	AB=1.000;AC=37;AF=0.661;AN=56;BaseQRankSum=11.612;DP=404;FS=0.000;HRun=0;HaplotypeScore=144.4997;InbreedingCoeff=0.8519;MQ=67.15;MQ0=0;MQRankSum=-14.565;QD=9.29;ReadPosRankSum=-1.006;VQSLOD=3.4104;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:99:0,99,1328	1/1:1,1:2:4.78:18,5,0	0/1:9,0:9:1.53:2,0,123	0/0:5,0:6:13.59:0,14,104	0/0:5,0:5:15.03:0,15,192	1/1:12,2:13:18.64:63,19,0	1/1:15,5:20:37.63:233,38,0	1/1:11,5:16:34.75:329,35,0	0/0:20,0:20:57.17:0,57,764	1/1:9,1:10:19.59:138,20,0	1/1:2,0:2:2.22:7,2,0	0/0:14,0:14:42.14:0,42,587	1/1:11,2:14:15.51:56,16,0	1/1:15,3:18:40.41:230,40,0	1/1:15,0:15:22.78:64,23,0	0/0:6,0:6:18.05:0,18,236	0/0:42,0:42:99:0,120,1653	1/1:16,3:19:33.17:222,33,0	1/1:8,5:13:34.01:339,34,0	1/1:7,1:8:10.90:63,11,0	1/1:24,7:31:27.29:173,27,0	1/1:8,1:9:4.59:16,5,0	0/0:2,0:2:6.02:0,6,84	0/0:34,0:34:99:0,99,1382	1/1:7,2:9:14.23:80,14,0	1/1:11,0:11:17.23:58,17,0	1/1:10,4:14:34.76:278,35,0	1/1:4,3:7:16.57:87,17,0
chr10	35291513	.	C	CA	24333.63	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=5.899;DP=710;FS=4.982;HRun=2;HaplotypeScore=114.2424;InbreedingCoeff=1.0000;MQ=82.59;MQ0=0;MQRankSum=-7.765;QD=39.76;ReadPosRankSum=5.859;VQSLOD=3.9032;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,132,1621	1/1:0,15:15:42.14:605,42,0	0/0:37,0:37:99:0,102,1261	0/0:16,0:16:48.15:0,48,584	1/1:2,22:24:69.23:988,69,0	1/1:2,27:29:78.26:1122,78,0	1/1:2,28:30:81.27:1165,81,0	1/1:3,34:37:99:1467,102,0	1/1:2,24:26:66.22:951,66,0	1/1:2,31:33:93.27:1299,93,0	1/1:1,18:19:48.16:691,48,0	1/1:1,22:23:66.22:950,66,0	1/1:0,20:20:57.19:820,57,0	1/1:0,22:22:66.22:950,66,0	1/1:1,22:23:66.22:950,66,0	1/1:1,19:20:54.18:778,54,0	1/1:0,29:29:78.26:1122,78,0	1/1:0,29:29:84.28:1210,84,0	1/1:5,15:20:51.17:734,51,0	1/1:3,21:24:60.20:864,60,0	1/1:1,33:34:99:1426,99,0	1/1:1,24:25:69.23:993,69,0	1/1:2,20:22:60.20:863,60,0	1/1:0,22:22:66.22:950,66,0	1/1:1,17:18:48.16:691,48,0	1/1:0,21:21:63.20:890,63,0	1/1:4,24:28:72.24:1037,72,0	1/1:0,19:19:57.19:820,57,0
chr10	35291761	.	T	TATTG	37525.54	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=7.440;DP=736;FS=5.172;HRun=0;HaplotypeScore=131.0079;InbreedingCoeff=0.9998;MQ=73.16;MQ0=2;MQRankSum=-10.209;QD=69.36;ReadPosRankSum=0.610;VQSLOD=6.5598;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,102,1903	1/1:1,9:10:30.10:807,30,0	0/0:32,0:31:90.28:0,90,1636	0/0:17,0:17:48.16:0,48,886	0/0:29,0:29:87.29:0,87,1619	1/1:6,18:25:57.19:1379,57,0	1/1:5,36:41:99:2891,114,0	1/1:8,17:26:72.22:1761,72,0	0/0:32,0:32:96.33:0,96,1806	1/1:4,26:29:84.28:2180,84,0	1/1:4,19:24:60.20:1475,60,0	1/1:4,23:28:81.28:2121,81,0	1/1:7,28:36:90.31:2394,90,0	1/1:2,29:31:87.30:2290,87,0	1/1:3,29:32:93.32:2393,93,0	0/0:19,0:19:54.19:0,54,1024	0/0:31,0:31:90.31:0,90,1708	1/1:2,29:31:90.31:2333,90,0	1/1:2,11:13:39.09:988,39,0	1/1:2,19:22:60.21:1491,60,0	1/1:7,22:30:75.26:1837,75,0	1/1:5,24:29:72.25:1912,72,0	1/1:3,23:26:71.95:1829,72,0	1/1:3,22:26:63.22:1674,63,0	1/1:1,21:22:63.22:1672,63,0	1/1:3,20:26:69.22:1747,69,0	1/1:2,18:21:57.20:1491,57,0	1/1:0,11:11:33.11:860,33,0
chr10	35293521	.	G	GGTTT	1419.26	PASS	AB=0.776;AC=18;AF=0.321;AN=56;BaseQRankSum=5.823;DP=499;FS=0.000;HRun=0;HaplotypeScore=96.4837;InbreedingCoeff=-0.3198;MQ=60.68;MQ0=16;MQRankSum=-6.796;QD=5.20;ReadPosRankSum=-4.953;VQSLOD=-0.2718;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:39:74.23:0,74,898	0/1:7,0:7:46.25:73,0,46	0/0:40,0:11:21.38:0,21,144	0/0:24,0:7:6.17:0,6,38	0/1:5,0:9:1.32:1,0,196	0/1:10,0:17:74.86:76,0,75	0/0:9,0:15:5.02:0,5,154	0/1:28,0:27:84.09:84,0,181	0/0:6,0:12:17.66:0,18,149	0/1:6,0:13:78.48:89,0,78	0/1:10,0:13:58.56:59,0,116	0/0:10,0:10:26.80:0,27,303	0/1:4,0:11:28.38:77,0,28	0/1:2,2:13:19.67:36,0,20	0/1:6,0:10:23.61:24,0,91	0/0:9,0:11:22.19:0,22,231	0/0:16,0:34:60.02:0,60,746	0/1:15,0:25:99:103,0,208	0/1:21,0:19:99:122,0,168	0/1:5,0:11:12.64:86,0,13	0/0:8,0:11:16.95:0,17,158	1/1:3,0:3:9.03:100,9,0	0/0:9,0:9:14.93:0,15,198	0/0:16,0:16:21.58:0,22,441	0/1:15,0:15:78.30:229,0,78	0/1:20,0:19:60.73:189,0,61	0/1:16,0:29:99:104,0,132	0/1:12,0:19:99:127,0,103
chr10	35293530	.	T	TG	524.48	PASS	AB=0.529;AC=5;AF=0.089;AN=56;BaseQRankSum=-3.985;DP=473;FS=4.217;HRun=0;HaplotypeScore=48.8506;InbreedingCoeff=0.7261;MQ=62.93;MQ0=9;MQRankSum=2.624;QD=17.48;ReadPosRankSum=4.952;VQSLOD=5.3438;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:37:99:0,105,1045	0/0:6,0:6:16.61:0,17,103	0/0:43,0:13:23.10:0,23,175	0/0:24,0:7:7.54:0,8,52	0/0:9,0:9:19.92:0,20,169	0/0:18,0:17:20.77:0,21,153	0/0:11,0:11:11.95:0,12,93	0/0:31,0:26:49.66:0,50,394	0/0:12,0:12:22.01:0,22,158	0/0:14,0:13:34.72:0,35,248	0/0:13,0:13:29.74:0,30,225	1/1:0,8:8:21.06:236,21,0	0/0:9,0:9:8.80:0,9,54	0/0:14,0:14:11.79:0,12,81	0/0:9,0:9:11.89:0,12,90	0/0:10,0:10:26.20:0,26,241	0/0:31,0:31:59.35:0,59,538	0/0:23,0:21:40.66:0,41,288	0/0:16,0:14:26.89:0,27,215	0/0:13,0:12:16.99:0,17,107	0/0:8,0:8:13.93:0,14,93	0/0:3,0:3:8.88:0,9,57	0/1:1,8:9:4.94:151,0,5	1/1:1,9:13:24.41:266,24,0	0/0:17,0:17:44.08:0,44,327	0/0:18,0:17:44.12:0,44,290	0/0:28,0:28:35.56:0,36,269	0/0:25,0:25:53.63:0,54,403
chr10	35293837	.	T	TGTG	29629.50	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=-14.460;DP=731;FS=3.532;HRun=0;HaplotypeScore=103.0982;InbreedingCoeff=0.9971;MQ=83.82;MQ0=0;MQRankSum=-5.837;QD=57.20;ReadPosRankSum=2.646;VQSLOD=7.0600;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,129,2158	1/1:1,6:7:15.05:345,15,0	0/0:25,0:25:57.18:0,57,936	0/0:26,0:25:72.25:0,72,1208	0/0:30,0:30:84.26:0,84,1364	1/1:2,18:20:48.16:1106,48,0	1/1:3,29:33:78.27:1798,78,0	1/1:5,34:39:99:2393,111,0	0/0:24,0:24:69.24:0,69,1163	1/1:3,24:28:37.71:1572,38,0	1/1:2,18:20:51.13:1084,51,0	1/1:2,30:33:87.30:1972,87,0	1/1:3,15:20:48.16:1085,48,0	1/1:0,20:21:57.15:1263,57,0	1/1:2,24:25:60.21:1384,60,0	0/0:32,0:32:93.29:0,93,1518	0/0:32,0:32:93.28:0,93,1526	1/1:0,26:26:78.27:1798,78,0	1/1:3,14:19:54.14:1120,54,0	1/1:1,21:21:51.17:1139,51,0	1/1:0,43:43:99:2281,99,0	1/1:2,18:20:51.17:1135,51,0	1/1:0,15:15:36.03:824,36,0	1/1:2,25:27:63.22:1453,63,0	1/1:0,23:23:51.18:1174,51,0	1/1:2,27:29:84.27:1881,84,0	1/1:2,25:28:78.26:1718,78,0	1/1:1,16:17:48.16:1105,48,0
chr10	35298892	.	T	TGGG	2125.30	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=5.046;DP=627;FS=0.000;HRun=7;HaplotypeScore=135.4972;InbreedingCoeff=0.9406;MQ=86.20;MQ0=0;MQRankSum=-6.988;QD=29.52;ReadPosRankSum=-3.266;VQSLOD=0.6698;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,102,1389	0/0:9,0:9:13.96:0,14,192	0/0:27,0:27:62.75:0,63,752	0/0:18,0:18:44.78:0,45,517	1/1:7,1:8:3.01:62,3,0	0/0:14,0:14:33.05:0,33,398	0/0:24,0:24:66.17:0,66,839	0/0:34,0:34:78.19:0,78,976	1/1:6,5:11:29.93:512,30,0	0/0:16,0:16:39.11:0,39,511	0/0:9,0:9:22.97:0,23,318	0/0:22,0:22:60.13:0,60,795	0/0:26,0:26:28.48:0,28,783	0/0:26,0:26:68.98:0,69,870	0/0:16,0:16:45.14:0,45,604	1/1:12,10:23:55.67:935,56,0	1/1:11,17:30:45.85:767,46,0	0/0:28,0:28:66.68:0,67,889	0/0:15,0:14:27.13:0,27,473	0/0:22,0:22:59.68:0,60,800	0/0:40,0:40:93.25:0,93,1224	0/0:18,0:18:54.15:0,54,694	0/0:20,0:20:51.14:0,51,674	0/0:37,0:37:99:0,111,1498	0/0:32,0:32:87.24:0,87,1151	0/0:24,0:25:62.97:0,63,823	0/0:28,0:28:75.20:0,75,968	0/0:7,0:7:18.52:0,19,218
chr10	35299663	.	CCTCTCTCT	C	751.60	PASS	AB=0.967;AC=23;AF=0.605;AN=38;BaseQRankSum=5.159;DP=405;FS=8.906;HRun=0;HaplotypeScore=125.1353;InbreedingCoeff=0.3942;MQ=53.25;MQ0=41;MQRankSum=-2.793;QD=3.83;ReadPosRankSum=0.612;VQSLOD=2.0279;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:19:30.09:0,30,815	0/1:8,0:9:32.82:50,0,33	./.	./.	0/0:10,0:9:7.05:0,7,122	1/1:15,0:15:3:28,3,0	1/1:20,0:20:2.37:8,2,0	0/1:18,0:14:0:0,0,0	0/0:9,0:8:12.04:0,12,249	1/1:14,0:12:3.91:80,4,0	./.	./.	1/1:5,0:6:3.89:34,4,0	1/1:7,0:8:3.01:56,3,0	./.	0/0:7,0:6:3.01:0,3,68	0/1:33,0:27:2.33:2,0,468	1/1:24,0:23:6.49:113,6,0	1/1:13,0:10:12.04:218,12,0	./.	0/0:23,0:19:3.01:0,3,80	./.	1/1:10,0:8:5.95:92,6,0	0/0:13,10:22:2.04:0,2,6	./.	1/1:15,0:15:9.03:141,9,0	1/1:6,0:7:3.01:59,3,0	./.
chr10	35299689	.	TCTCTCTCTCTCTCTCTCTCACACACACACACACACA	T	6810.37	PASS	AB=0.860;AC=26;AF=0.500;AN=52;BaseQRankSum=6.512;DP=449;FS=2.148;HRun=0;HaplotypeScore=244.4865;InbreedingCoeff=0.5620;MQ=40.01;MQ0=51;MQRankSum=-4.302;QD=30.40;ReadPosRankSum=-0.452;VQSLOD=3.6463;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:27:51.16:0,51,4796	0/1:6,1:7:99:557,0,275	0/0:5,0:3:9.03:0,9,176	0/0:17,0:7:15.05:0,15,284	0/0:12,0:11:12.04:0,12,878	1/1:3,11:13:6.49:402,6,0	1/1:21,0:17:15.38:339,15,0	1/1:15,0:11:7.06:93,7,0	0/0:8,0:7:15.52:0,16,1432	1/1:6,12:16:17.60:807,18,0	./.	0/0:17,0:16:17.96:0,18,1303	1/1:7,0:6:12.03:366,12,0	1/1:19,0:18:8.86:511,9,0	1/1:12,0:11:8.06:142,8,0	0/0:11,0:9:18.06:0,18,1706	0/0:40,0:33:79.01:0,79,6107	1/1:11,20:29:8.38:700,8,0	1/1:6,9:12:29.84:1107,30,0	0/0:12,0:11:2.24:0,2,5	0/1:21,0:16:47.26:47,0,313	1/1:10,0:8:5.93:162,6,0	0/0:19,0:16:15.05:0,15,1040	0/0:23,0:20:7.94:0,8,805	./.	1/1:3,13:16:32.60:1196,33,0	0/1:3,10:13:26.88:241,0,27	0/1:5,0:2:10.98:140,0,11
chr10	35299707	.	TCACACACACACACACACA	T	4080.43	PASS	AB=0.786;AC=27;AF=0.540;AN=50;BaseQRankSum=6.095;DP=398;FS=9.010;HRun=0;HaplotypeScore=159.8140;InbreedingCoeff=0.4645;MQ=40.52;MQ0=32;MQRankSum=-6.899;QD=19.34;ReadPosRankSum=-0.730;VQSLOD=1.8284;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:23:35.94:0,36,2413	0/1:4,1:6:81.83:414,0,82	./.	0/0:3,0:1:2.98:0,3,22	0/0:12,0:11:7.27:0,7,401	1/1:12,0:12:6.91:293,7,0	1/1:8,8:13:5.45:129,5,0	1/1:10,0:10:13.85:67,14,0	0/0:10,0:9:6.49:0,6,502	1/1:15,0:16:17.99:486,18,0	./.	0/0:15,0:15:18.06:0,18,1332	1/1:2,4:6:3.01:136,3,0	1/1:5,13:17:9.03:386,9,0	1/1:6,5:10:2.65:57,3,0	0/0:11,0:10:21.13:0,21,1324	0/0:35,0:31:57.67:0,58,3442	1/1:25,0:24:9.25:409,9,0	1/1:12,0:12:23.81:531,24,0	0/1:4,8:12:0:0,0,0	0/1:19,2:18:52.76:53,0,94	1/1:4,5:7:3.01:145,3,0	0/0:17,0:15:15.05:0,15,868	0/0:29,0:27:26.69:0,27,1891	./.	1/1:14,0:14:23.56:738,24,0	0/1:13,0:13:26.96:94,0,27	0/1:2,1:2:10.98:140,0,11
chr10	35300041	.	A	AT	3195.28	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-12.915;DP=635;FS=5.385;HRun=5;HaplotypeScore=65.6971;InbreedingCoeff=0.9980;MQ=77.88;MQ0=0;MQRankSum=0.787;QD=32.28;ReadPosRankSum=2.115;VQSLOD=4.4610;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:96.24:0,96,1032	0/0:9,0:9:27.05:0,27,277	0/0:17,0:17:42.05:0,42,415	0/0:12,0:12:20.41:0,20,196	1/1:1,16:17:48.16:631,48,0	0/0:26,0:26:69.16:0,69,733	0/0:30,0:30:84.19:0,84,894	0/0:34,0:34:84.18:0,84,879	1/1:2,28:30:78.25:1026,78,0	0/0:19,0:19:45.11:0,45,484	0/0:14,0:14:36.09:0,36,386	0/0:24,0:24:60.12:0,60,628	0/0:21,0:21:54.14:0,54,580	0/0:15,0:15:45.11:0,45,483	0/0:38,0:38:99:0,105,1105	1/1:0,24:24:63.20:829,63,0	1/1:1,27:28:66.69:869,67,0	0/0:18,0:18:51.10:0,51,537	0/0:23,0:23:57.11:0,57,591	0/0:22,0:22:57.12:0,57,597	0/0:24,0:24:69.15:0,69,733	0/0:16,0:16:42.06:0,42,432	0/0:19,0:19:48.07:0,48,494	0/0:29,0:29:84.10:0,84,861	0/0:20,0:20:57.14:0,57,613	0/0:29,0:29:87.22:0,87,935	0/0:34,0:33:96.20:0,96,1014	0/0:9,0:9:27.04:0,27,279
chr10	35301760	.	A	AG	25816.74	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-12.333;DP=753;FS=3.684;HRun=2;HaplotypeScore=66.0788;InbreedingCoeff=0.9996;MQ=90.18;MQ0=0;MQRankSum=-9.003;QD=39.66;ReadPosRankSum=4.383;VQSLOD=5.3766;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,123,1510	1/1:0,11:11:33.03:449,33,0	0/0:26,0:26:72.20:0,72,855	0/0:32,0:33:67.15:0,67,862	1/1:0,19:19:57.08:772,57,0	1/1:0,13:13:33.11:475,33,0	1/1:0,27:27:69.23:993,69,0	1/1:0,29:29:87.27:1216,87,0	1/1:0,30:30:90.30:1296,90,0	1/1:2,28:30:84.28:1207,84,0	1/1:0,18:18:51.17:734,51,0	1/1:0,26:26:72.24:1037,72,0	1/1:1,38:39:96.32:1381,96,0	1/1:0,24:24:69.23:993,69,0	1/1:1,32:33:90.30:1296,90,0	1/1:1,26:27:72.24:1037,72,0	1/1:0,35:35:99:1468,102,0	1/1:0,23:23:66.22:946,66,0	1/1:4,28:32:84.18:1094,84,0	1/1:1,29:30:84.20:1173,84,0	1/1:1,50:51:99:2116,147,0	1/1:1,26:27:69.23:992,69,0	1/1:0,20:20:57.19:821,57,0	1/1:1,25:26:69.23:994,69,0	1/1:0,13:13:39.13:562,39,0	1/1:0,27:27:81.25:1144,81,0	1/1:1,30:31:84.28:1209,84,0	1/1:1,9:10:30.08:413,30,0
chr10	35302200	.	T	TACATTAC	37420.92	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=16.306;DP=644;FS=6.892;HRun=0;HaplotypeScore=170.3530;InbreedingCoeff=0.9947;MQ=70.21;MQ0=0;MQRankSum=-18.557;QD=93.55;ReadPosRankSum=-0.313;VQSLOD=5.5065;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,120,3214	1/1:4,6:10:30.10:1047,30,0	0/0:21,0:21:54.19:0,54,1321	0/0:17,0:17:48.16:0,48,1084	0/0:30,0:30:90.27:0,90,2266	1/1:3,24:29:69.24:2744,69,0	1/1:11,12:23:51.18:1762,51,0	1/1:17,9:28:69.19:2299,69,0	0/0:22,0:22:63.20:0,63,1571	1/1:9,18:32:93.27:3141,93,0	1/1:10,20:30:84.29:2969,84,0	0/0:18,0:18:51.14:0,51,1243	1/1:6,11:17:45.15:1638,45,0	1/1:7,18:28:69.24:2618,69,0	1/1:9,18:29:72.24:2686,72,0	0/0:23,0:23:69.24:0,69,1780	0/0:35,0:35:99:0,105,2710	1/1:9,7:17:39.13:1477,39,0	1/1:8,6:14:36.12:1298,36,0	1/1:11,15:26:72.24:2580,72,0	1/1:4,4:8:21.07:774,21,0	1/1:8,11:20:57.20:1964,57,0	0/0:23,0:23:69.21:0,69,1647	0/0:15,0:15:45.15:0,45,1200	1/1:6,24:31:75.26:2972,75,0	1/1:11,17:31:84.21:2841,84,0	1/1:6,13:22:57.19:2120,57,0	1/1:0,4:4:12.04:490,12,0
chr10	35302494	.	C	CT	9779.23	PASS	AB=0.571;AC=35;AF=0.625;AN=56;BaseQRankSum=7.625;DP=588;FS=1.517;HRun=9;HaplotypeScore=84.8592;InbreedingCoeff=0.9003;MQ=78.08;MQ0=0;MQRankSum=-2.596;QD=26.57;ReadPosRankSum=1.573;VQSLOD=5.0385;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:56.92:0,57,487	0/1:3,9:12:0.19:178,0,0	0/0:22,0:21:34.42:0,34,243	0/0:13,0:13:3.18:0,3,85	0/0:31,0:33:91:0,91,759	1/1:4,25:29:72.19:796,72,0	1/1:2,8:10:18.05:199,18,0	1/1:4,30:35:64.72:876,65,0	0/0:18,0:18:41.96:0,42,361	1/1:2,23:26:68.97:728,69,0	1/1:2,24:27:71.86:741,72,0	0/0:18,0:18:53.97:0,54,465	1/1:2,13:15:39.11:431,39,0	1/1:2,10:12:1.02:239,1,0	1/1:2,12:14:33.09:365,33,0	0/0:15,0:15:35.98:0,36,312	0/0:41,0:41:98.89:0,99,844	1/1:1,24:25:57.15:630,57,0	1/1:3,18:21:54.15:597,54,0	1/1:1,17:18:42.11:463,42,0	1/1:2,9:11:24.06:266,24,0	1/1:1,20:21:48.05:514,48,0	0/0:26,0:26:65.97:0,66,571	0/0:10,0:10:26.98:0,27,231	1/1:2,26:28:72.19:796,72,0	1/1:2,28:30:73.48:897,73,0	1/1:1,19:20:54.15:596,54,0	1/1:0,14:14:42.11:465,42,0
chr10	35302903	.	T	TCCACTACTGGCAGAACGTTTAATTA	95500.23	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-3.602;DP=442;FS=6.320;HRun=0;HaplotypeScore=240.5988;InbreedingCoeff=0.8690;MQ=81.97;MQ0=0;MQRankSum=-9.941;QD=236.97;ReadPosRankSum=5.999;VQSLOD=3.7152;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:27,6:37:99:9932,99,0	1/1:2,2:5:12.04:1172,12,0	0/0:23,0:23:66.23:0,66,2758	0/0:16,0:16:45.15:0,45,2449	1/1:10,2:16:33.07:1905,33,0	1/1:9,4:14:36.12:3378,36,0	1/1:14,0:14:39.13:2542,39,0	1/1:19,0:19:54.19:4119,54,0	1/1:8,6:16:42.14:4459,42,0	1/1:13,1:17:51.17:3704,51,0	1/1:10,1:13:36.12:2866,36,0	1/1:12,12:26:72.25:6810,72,0	1/1:13,7:26:63.05:6404,63,0	1/1:12,5:17:51.18:5382,51,0	1/1:12,6:20:54.19:5219,54,0	1/1:20,4:27:72.25:6852,72,0	1/1:6,2:9:21.07:1696,21,0	1/1:4,3:10:21.07:2386,21,0	1/1:20,0:20:54.19:4280,54,0	1/1:10,0:9:27.09:3000,27,0	1/1:14,0:14:42.11:2789,42,0	1/1:4,3:8:21.07:1967,21,0	1/1:7,2:11:27.09:2696,27,0	1/1:3,2:7:9.03:828,9,0	1/1:5,2:8:18.06:1229,18,0	1/1:13,5:19:51.18:5445,51,0	1/1:9,4:16:35.33:4082,35,0	1/1:2,1:4:3.01:359,3,0
chr10	35303224	.	G	GGTGTGT	3856.50	PASS	AB=1.000;AC=35;AF=0.700;AN=50;BaseQRankSum=0.329;DP=587;FS=0.000;HRun=0;HaplotypeScore=142.9752;InbreedingCoeff=0.6601;MQ=70.61;MQ0=16;MQRankSum=-3.524;QD=10.80;ReadPosRankSum=-4.090;VQSLOD=1.5764;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:25:19.10:375,19,0	./.	./.	./.	0/0:17,0:17:12.51:0,13,231	1/1:12,0:13:8.59:168,9,0	1/1:25,0:24:19.60:245,20,0	1/1:24,0:23:14.95:146,15,0	0/1:20,0:20:10.65:11,0,149	1/1:15,0:20:20.53:347,21,0	0/0:10,0:10:0:0,0,0	0/0:28,0:29:12.92:0,13,185	1/1:13,5:19:9.49:175,9,0	1/1:18,0:21:3.01:70,3,0	1/1:15,5:23:9.03:230,9,0	0/0:17,0:19:18.40:0,18,362	0/0:19,0:23:12.30:0,12,425	1/1:13,10:26:16.77:457,17,0	1/1:12,0:12:3.01:84,3,0	1/1:5,1:8:3.01:96,3,0	1/1:23,0:29:11.97:201,12,0	1/1:9,0:8:3.01:48,3,0	0/0:6,0:9:12.04:0,12,200	0/0:21,0:21:11.88:0,12,241	1/1:13,1:24:11.12:256,11,0	1/1:12,0:20:33.07:579,33,0	1/1:19,1:26:6.02:133,6,0	1/1:6,0:9:12:237,12,0
chr10	35304104	.	CT	C	5093.27	PASS	AB=0.630;AC=34;AF=0.607;AN=56;BaseQRankSum=-4.258;DP=557;FS=0.383;HRun=12;HaplotypeScore=73.6309;InbreedingCoeff=0.7312;MQ=81.36;MQ0=3;MQRankSum=0.879;QD=14.31;ReadPosRankSum=2.503;VQSLOD=5.5270;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:45.05:0,45,446	1/1:2,8:10:17.93:139,18,0	0/0:27,1:20:6.66:0,7,213	0/0:32,0:24:7.64:0,8,204	0/0:13,0:29:58.01:0,58,370	1/1:7,24:31:59.73:462,60,0	0/1:2,12:15:0.76:220,0,1	1/1:7,23:30:62.68:480,63,0	0/0:4,0:20:34.31:0,34,184	1/1:6,16:23:25.41:361,25,0	1/1:0,9:9:23.78:174,24,0	0/0:14,0:15:41.89:0,42,396	1/1:2,13:15:23.83:186,24,0	1/1:2,7:9:11.95:93,12,0	1/1:2,14:17:37.90:285,38,0	0/0:2,0:14:19.89:0,20,100	0/0:5,0:32:64.50:0,64,353	0/1:6,21:27:3.43:297,0,3	1/1:7,12:21:21.39:264,21,0	1/1:6,18:24:50.72:388,51,0	1/1:3,2:6:11:74,11,0	1/1:1,12:13:32.87:255,33,0	0/1:21,3:24:35.26:35,0,337	0/0:11,0:11:30.05:0,30,299	1/1:1,13:14:29.89:232,30,0	1/1:2,24:26:71.58:541,72,0	1/1:6,28:34:65.65:505,66,0	0/1:1,6:8:5.51:102,0,6
chr10	35305712	.	GCA	G	3087.73	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-2.651;DP=686;FS=1.557;HRun=0;HaplotypeScore=130.5543;InbreedingCoeff=0.9984;MQ=87.26;MQ0=0;MQRankSum=-1.750;QD=42.30;ReadPosRankSum=3.485;VQSLOD=4.8635;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,123,2496	0/0:12,0:12:36.12:0,36,731	0/0:27,0:27:73.80:0,74,1418	0/0:22,0:22:66.21:0,66,1287	0/0:13,0:13:36.12:0,36,731	0/0:18,0:18:54.19:0,54,1084	0/0:33,0:33:99:0,99,1992	0/0:29,0:29:84.28:0,84,1634	0/0:23,0:23:66.23:0,66,1328	0/0:29,0:29:87.30:0,87,1768	0/0:14,0:14:36.11:0,36,669	1/1:0,29:29:81.28:1321,81,0	0/0:29,0:29:84.29:0,84,1705	0/0:30,0:30:81.28:0,81,1644	0/0:31,0:31:84.29:0,84,1687	0/0:27,0:27:81.25:0,81,1607	0/0:38,0:38:99:0,111,2213	0/0:17,0:17:51.18:0,51,1035	0/0:18,0:18:54.14:0,54,1031	0/0:17,0:17:51.18:0,51,1026	0/0:36,0:36:93.32:0,93,1885	0/0:18,0:18:51.17:0,51,1022	1/1:0,8:8:21.07:343,21,0	1/1:0,36:36:96.33:1566,96,0	0/0:21,0:21:63.22:0,63,1247	0/0:19,0:19:57.18:0,57,1089	0/0:34,0:34:99:0,99,2010	0/0:15,0:15:42.14:0,42,853
chr10	35305724	.	G	GAC	18670.37	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-17.614;DP=693;FS=3.894;HRun=0;HaplotypeScore=87.6412;InbreedingCoeff=0.9949;MQ=90.09;MQ0=2;MQRankSum=-3.909;QD=44.67;ReadPosRankSum=2.079;VQSLOD=6.5099;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,99,1360	1/1:2,7:9:24.08:411,24,0	0/0:29,0:29:78.23:0,78,1020	0/0:25,0:25:71.53:0,72,912	0/0:13,0:13:36.12:0,36,494	1/1:2,19:21:51.17:905,51,0	1/1:3,31:34:87.30:1543,87,0	1/1:1,32:34:99:1683,99,0	0/0:23,0:23:69.23:0,69,946	1/1:1,23:24:69.18:1163,69,0	1/1:0,11:11:27.09:471,27,0	0/0:32,0:32:84.28:0,84,1154	1/1:3,27:31:81.28:1422,81,0	1/1:1,27:28:73.49:1275,73,0	1/1:3,32:34:81.28:1434,81,0	0/0:25,0:25:72.24:0,72,990	0/0:46,0:46:99:0,126,1730	1/1:1,17:18:48.16:851,48,0	1/1:6,15:21:45.13:768,45,0	1/1:1,15:16:39.13:692,39,0	1/1:0,34:34:90.31:1597,90,0	1/1:2,12:14:33.11:585,33,0	0/0:6,0:6:12.04:0,12,165	0/0:35,0:35:93.27:0,93,1257	1/1:4,16:20:51.16:868,51,0	1/1:2,16:18:48.15:820,48,0	1/1:4,27:32:75.17:1329,75,0	1/1:0,17:17:48.16:851,48,0
chr10	35305887	.	TA	T	1541.11	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.469;DP=759;FS=2.058;HRun=1;HaplotypeScore=72.1255;InbreedingCoeff=0.9999;MQ=87.16;MQ0=0;MQRankSum=-3.941;QD=38.53;ReadPosRankSum=3.460;VQSLOD=4.4057;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,40:40:99:1636,117,0	0/0:17,0:17:51.17:0,51,815	0/0:31,0:31:90.28:0,90,1361	0/0:21,0:21:60.16:0,60,875	0/0:24,0:24:72.22:0,72,1102	0/0:22,0:22:63.21:0,63,1000	0/0:25,0:25:75.26:0,75,1199	0/0:34,0:34:99:0,102,1568	0/0:34,0:34:99:0,102,1628	0/0:31,0:31:93.30:0,93,1444	0/0:21,0:21:63.21:0,63,1001	0/0:32,0:32:96.31:0,96,1507	0/0:26,0:26:78.27:0,78,1245	0/0:19,0:19:57.19:0,57,911	0/0:32,0:32:96.31:0,96,1509	0/0:29,0:29:87.30:0,87,1389	0/0:30,0:30:90.29:0,90,1409	0/0:26,0:26:78.27:0,78,1241	0/0:15,0:15:45.15:0,45,717	0/0:32,0:32:96.33:0,96,1531	0/0:16,0:16:48.16:0,48,767	0/0:30,0:30:87.28:0,87,1359	0/0:21,0:21:60.20:0,60,959	0/0:25,0:25:75.26:0,75,1199	0/0:33,0:33:96.32:0,96,1506	0/0:38,0:38:99:0,114,1821	0/0:41,0:41:99:0,123,1914	0/0:14,0:14:42.14:0,42,664
chr10	35306430	.	TCACACACA	T	2946.98	PASS	AB=0.718;AC=38;AF=0.731;AN=52;BaseQRankSum=5.703;DP=496;FS=3.824;HRun=0;HaplotypeScore=130.6132;InbreedingCoeff=0.5361;MQ=56.08;MQ0=16;MQRankSum=-6.656;QD=9.54;ReadPosRankSum=-0.202;VQSLOD=2.5226;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:39:16.88:0,17,269	1/1:3,1:5:6.02:126,6,0	./.	0/0:35,0:14:3.01:0,3,43	0/0:12,0:12:15.05:0,15,492	1/1:10,3:14:15.04:306,15,0	1/1:15,7:22:3.01:69,3,0	1/1:20,0:20:3.78:43,4,0	0/0:10,0:10:27.09:0,27,864	1/1:13,2:14:8.24:146,8,0	1/1:8,1:9:0.47:1,0,0	1/1:9,11:21:18.06:423,18,0	1/1:4,9:13:18.06:410,18,0	1/1:4,15:19:15.05:373,15,0	1/1:11,3:15:12.04:282,12,0	0/0:19,0:19:31.26:0,31,1028	0/0:23,0:25:42.11:0,42,1398	1/1:10,6:16:4.82:148,5,0	1/1:5,0:8:6.88:35,7,0	0/1:8,1:11:6.86:7,0,72	./.	1/1:10,5:16:0.47:1,0,0	1/1:4,6:10:6.11:92,6,0	1/1:18,10:29:3.36:76,3,0	1/1:12,10:22:12.04:259,12,0	1/1:13,1:15:6.49:132,6,0	0/1:13,1:23:42.31:129,0,42	1/1:4,0:4:3.01:57,3,0
chr10	35307332	.	CGTGA	C	2561.04	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=9.712;DP=806;FS=34.183;HRun=0;HaplotypeScore=125.0020;InbreedingCoeff=0.9998;MQ=90.03;MQ0=0;MQRankSum=-7.442;QD=39.40;ReadPosRankSum=3.664;VQSLOD=1.8589;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,60:65:99:2656,141,0	0/0:13,0:13:36.12:0,36,962	0/0:38,0:38:99:0,108,2794	0/0:24,0:24:72.25:0,72,1746	0/0:27,0:27:75.26:0,75,1956	0/0:30,0:30:90.29:0,90,2287	0/0:28,0:28:78.27:0,78,2089	0/0:41,0:41:99:0,105,2650	0/0:20,0:20:60.18:0,60,1519	0/0:29,0:29:87.30:0,87,2346	0/0:20,0:20:57.16:0,57,1415	0/0:29,0:29:81.28:0,81,2120	0/0:26,0:26:75.26:0,75,2024	0/0:35,0:35:96.33:0,96,2507	0/0:29,0:29:84.27:0,84,2177	0/0:17,0:17:51.18:0,51,1374	0/0:39,0:39:99:0,114,2998	0/0:31,0:31:87.30:0,87,2298	0/0:20,0:20:51.17:0,51,1300	0/0:27,0:27:72.25:0,72,1869	0/0:40,0:40:99:0,117,3047	0/0:22,0:22:63.22:0,63,1690	0/0:28,0:27:84.29:0,84,2233	0/0:44,0:44:99:0,129,3381	0/0:22,0:22:66.23:0,66,1781	0/0:25,0:25:75.24:0,75,1874	0/0:23,0:23:69.24:0,69,1827	0/0:14,0:14:42.14:0,42,1133
chr10	35308382	.	GGAGAGAGAGAGAGAGAGAGAGA	G	231.10	PASS	AB=1.000;AC=7;AF=0.219;AN=32;BaseQRankSum=2.643;DP=181;FS=10.742;HRun=0;HaplotypeScore=72.8076;InbreedingCoeff=0.2655;MQ=35.08;MQ0=33;MQRankSum=-0.579;QD=3.08;ReadPosRankSum=-0.076;VQSLOD=0.2958;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:18,0:14:14.15:14,0,21	./.	./.	./.	./.	./.	./.	0/0:16,0:13:39.07:0,39,1034	0/0:8,0:5:3.01:0,3,219	0/0:2,0:2:6.02:0,6,528	./.	1/1:16,8:20:3.01:174,3,0	0/0:4,0:3:3.01:0,3,241	./.	./.	./.	0/0:6,0:3:3.01:0,3,43	0/0:4,0:4:9.03:0,9,526	0/0:5,0:2:3.01:0,3,71	./.	0/0:10,0:6:3.01:0,3,121	0/0:2,0:1:3.01:0,3,160	1/1:9,0:9:3.01:35,3,0	1/1:12,12:24:3.48:107,3,0	./.	0/0:6,0:6:13.60:0,14,427	0/0:4,0:2:0:0,0,0	0/0:3,0:1:2.99:0,3,23
chr10	35309111	.	GA	G	2291.29	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=7.408;DP=777;FS=3.614;HRun=2;HaplotypeScore=78.7220;InbreedingCoeff=0.9999;MQ=83.28;MQ0=1;MQRankSum=0.436;QD=32.27;ReadPosRankSum=2.573;VQSLOD=3.6303;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,129,1890	0/0:12,0:12:36.09:0,36,515	0/0:25,0:25:72.23:0,72,1042	0/0:22,0:22:54.19:0,54,863	0/0:32,0:32:93.14:0,93,1286	0/0:22,0:22:63.19:0,63,910	0/0:31,0:31:93.27:0,93,1333	0/0:30,0:30:90.29:0,90,1314	0/0:19,0:19:57.18:0,57,829	0/0:40,0:40:99:0,120,1763	0/0:26,0:26:78.26:0,78,1160	1/1:0,23:23:60.15:760,60,0	0/0:43,0:42:99:0,123,1781	0/0:22,0:22:66.22:0,66,989	0/0:20,0:20:60.20:0,60,897	0/0:26,0:26:78.26:0,78,1169	0/0:37,0:37:99:0,105,1531	0/0:22,0:22:66.16:0,66,937	0/0:16,0:16:48.15:0,48,682	0/0:39,0:39:99:0,111,1638	0/0:45,0:45:99:0,132,1953	0/0:27,0:27:78.22:0,78,1142	1/1:0,18:18:51.17:661,51,0	1/1:1,29:30:78.25:1013,78,0	0/0:21,0:21:63.15:0,63,895	0/0:29,0:29:87.29:0,87,1285	0/0:25,0:25:69.17:0,69,1005	0/0:32,0:32:90.30:0,90,1349
chr10	35309611	.	CCT	C	118.55	PASS	AB=1.000;AC=22;AF=0.647;AN=34;BaseQRankSum=-0.289;DP=73;FS=0.000;HRun=0;HaplotypeScore=29.9925;InbreedingCoeff=0.3263;MQ=95.08;MQ0=0;MQRankSum=-2.684;QD=1.91;ReadPosRankSum=-0.289;VQSLOD=1.1074;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:7,6:12:18.35:131,18,0	./.	0/1:9,0:7:3.10:3,0,104	0/0:9,0:6:10.99:0,11,87	./.	1/1:3,0:3:2.96:20,3,0	0/1:8,0:8:0:2,0,0	1/1:1,0:1:2.50:9,2,0	./.	./.	./.	./.	1/1:2,0:2:2.96:19,3,0	./.	1/1:3,0:3:2.84:15,3,0	./.	0/1:1,0:1:0:0,0,0	0/1:1,0:1:0:0,0,0	0/1:2,0:2:0:0,0,0	0/1:2,0:2:0:0,0,0	0/1:9,0:9:0.02:2,0,0	0/1:1,0:1:0:0,0,0	./.	0/1:3,0:3:0:0,0,0	0/1:1,0:1:0:0,0,0	1/1:2,0:2:0.47:1,0,0	./.	./.
chr10	35310531	.	GCA	G	954.71	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.588;DP=723;FS=6.570;HRun=0;HaplotypeScore=164.6862;InbreedingCoeff=0.9957;MQ=73.47;MQ0=0;MQRankSum=-3.355;QD=29.83;ReadPosRankSum=1.880;VQSLOD=5.3857;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,31:32:75.01:1050,75,0	0/0:8,0:8:21.07:0,21,378	0/0:30,0:30:90.26:0,90,1502	0/0:26,0:25:65.49:0,65,1101	0/0:29,0:29:75.26:0,75,1350	0/0:22,0:22:60.19:0,60,1050	0/0:37,0:37:99:0,105,1787	0/0:24,0:24:60.19:0,60,1033	0/0:27,0:27:78.27:0,78,1395	0/0:30,0:30:87.30:0,87,1552	0/0:18,0:18:51.16:0,51,888	0/0:39,0:39:99:0,114,2052	0/0:23,0:23:60.21:0,60,1065	0/0:16,0:16:45.15:0,45,810	0/0:27,0:27:81.28:0,81,1451	0/0:22,0:22:63.22:0,63,1134	0/0:35,0:35:96.30:0,96,1675	0/0:20,0:20:57.20:0,57,1026	0/0:16,0:16:42.11:0,42,723	0/0:28,0:28:78.27:0,78,1384	0/0:44,0:44:99:0,126,2201	0/0:15,0:15:42.14:0,42,755	0/0:22,0:22:60.19:0,60,1050	0/0:38,0:38:99:0,102,1795	0/0:19,0:19:54.18:0,54,965	0/0:27,0:27:81.26:0,81,1429	0/0:36,0:36:99:0,108,1939	0/0:13,0:13:33.01:0,33,495
chr10	35310724	.	G	GT	18972.42	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=5.248;DP=669;FS=4.256;HRun=7;HaplotypeScore=137.2599;InbreedingCoeff=0.9977;MQ=80.72;MQ0=0;MQRankSum=-9.378;QD=30.16;ReadPosRankSum=5.781;VQSLOD=2.9017;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,21:23:51.16:616,51,0	1/1:0,8:8:21.06:253,21,0	0/0:25,0:25:63.01:0,63,589	0/0:15,0:15:38.73:0,39,357	1/1:4,37:41:99:1343,114,0	1/1:0,17:17:42.13:507,42,0	1/1:5,24:29:60.18:723,60,0	1/1:3,23:26:66.14:768,66,0	1/1:1,19:20:54.17:652,54,0	1/1:2,26:28:78.20:916,78,0	1/1:1,21:22:63.19:761,63,0	1/1:3,19:22:48.15:580,48,0	1/1:2,19:21:54.16:643,54,0	1/1:3,19:22:54.17:652,54,0	1/1:3,26:29:72.15:851,72,0	1/1:3,22:25:66.20:797,66,0	1/1:3,27:30:78.24:942,78,0	1/1:3,25:28:54.17:652,54,0	1/1:3,20:24:39.66:722,40,0	1/1:2,14:16:42.13:507,42,0	1/1:3,13:16:36.11:435,36,0	1/1:3,22:25:66.16:781,66,0	1/1:3,17:20:48.06:560,48,0	1/1:2,18:20:45.14:544,45,0	1/1:2,27:29:78.24:942,78,0	1/1:0,25:23:72.22:865,72,0	1/1:2,34:36:93.29:1123,93,0	1/1:3,23:26:69.21:834,69,0
chr10	35311253	.	AGCTGT	A	26041.77	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-2.879;DP=601;FS=0.000;HRun=0;HaplotypeScore=137.8386;InbreedingCoeff=0.9299;MQ=71.48;MQ0=0;MQRankSum=-8.568;QD=45.61;ReadPosRankSum=4.577;VQSLOD=4.6923;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,24:24:51.11:957,51,0	1/1:2,6:7:12.04:251,12,0	0/0:11,0:11:30.06:0,30,754	0/0:19,0:19:48.13:0,48,1272	1/1:0,5:5:9:162,9,0	1/1:1,19:20:51.17:1044,51,0	1/1:8,18:26:42.14:847,42,0	1/1:4,25:29:75.16:1402,75,0	1/1:1,18:19:48.16:1005,48,0	1/1:3,28:30:81.25:1620,81,0	1/1:3,6:9:12.04:243,12,0	1/1:2,19:21:48.16:1001,48,0	1/1:5,24:29:42.14:880,42,0	1/1:1,25:27:72.25:1485,72,0	1/1:1,27:28:63.22:1321,63,0	1/1:2,23:25:66.23:1382,66,0	1/1:5,20:25:44.66:871,45,0	1/1:0,18:18:48.16:999,48,0	1/1:1,25:26:75.25:1516,75,0	1/1:1,14:14:24.08:478,24,0	1/1:1,64:65:99:3223,163,0	1/1:3,12:15:24.08:503,24,0	1/1:1,9:9:21.07:396,21,0	1/1:0,25:25:60.16:1258,60,0	1/1:1,26:27:57.19:1162,57,0	1/1:4,17:21:45.14:902,45,0	1/1:0,17:17:39.61:819,40,0	1/1:1,5:6:15.05:314,15,0
chr10	35312436	.	T	TA	6073.01	PASS	AB=0.625;AC=35;AF=0.625;AN=56;BaseQRankSum=-10.210;DP=586;FS=3.983;HRun=12;HaplotypeScore=68.8943;InbreedingCoeff=0.9066;MQ=72.63;MQ0=0;MQRankSum=-0.285;QD=16.78;ReadPosRankSum=-3.197;VQSLOD=4.8372;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:37,3:41:60.21:0,60,603	1/1:2,6:8:12.02:117,12,0	0/0:12,0:13:12.05:0,12,98	0/0:9,0:7:4.83:0,5,41	0/0:28,1:29:36.36:0,36,428	1/1:7,14:21:36.06:350,36,0	1/1:4,20:24:36.06:350,36,0	1/1:12,22:35:63.35:580,63,0	0/0:14,0:14:22.90:0,23,173	1/1:7,16:23:42.04:399,42,0	1/1:8,12:20:9.33:230,9,0	0/0:2,0:21:32.58:0,33,94	1/1:5,15:20:44.99:418,45,0	0/1:6,9:15:3.79:119,0,4	1/1:7,20:27:50.64:483,51,0	0/0:26,0:26:56.58:0,57,413	0/0:29,0:31:69.59:0,70,493	1/1:9,6:15:25.58:231,26,0	1/1:7,15:23:25.91:372,26,0	1/1:11,11:22:36.90:341,37,0	1/1:5,16:21:48.08:467,48,0	1/1:6,9:15:21.51:205,22,0	0/0:7,0:20:19.53:0,20,69	0/0:2,0:20:34.62:0,35,100	1/1:4,12:16:30.05:292,30,0	1/1:9,21:30:63.05:594,63,0	1/1:4,12:16:32.95:321,33,0	1/1:2,9:11:21.03:204,21,0
chr10	35313526	.	T	TA	10603.68	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-4.036;DP=667;FS=10.360;HRun=9;HaplotypeScore=104.8535;InbreedingCoeff=0.9844;MQ=72.45;MQ0=0;MQRankSum=0.005;QD=25.19;ReadPosRankSum=-2.457;VQSLOD=3.3541;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:2,0:55:93.44:0,93,277	1/1:1,7:8:18.05:199,18,0	0/0:14,0:14:19.03:0,19,142	0/0:7,0:7:8.87:0,9,67	0/0:32,0:32:71.91:0,72,612	1/1:1,24:25:72.19:796,72,0	1/1:6,22:29:42.96:685,43,0	1/1:5,21:26:40.12:671,40,0	0/0:29,0:29:80.98:0,81,703	1/1:5,21:26:60.14:654,60,0	1/1:5,20:25:28.05:524,28,0	0/0:18,0:18:41.98:0,42,365	1/1:2,10:12:30.08:332,30,0	1/1:2,17:19:51.14:564,51,0	1/1:5,18:23:51.14:564,51,0	0/0:26,0:26:68.93:0,69,592	0/0:17,0:17:44.98:0,45,391	1/1:1,26:27:69.19:763,69,0	1/1:9,13:22:13.03:363,13,0	1/1:5,23:28:47.39:740,47,0	1/1:3,13:16:33.09:365,33,0	1/1:4,19:24:24.28:532,24,0	0/0:21,0:21:44.96:0,45,391	0/0:26,0:26:62.98:0,63,547	1/1:4,22:26:60.16:664,60,0	1/1:5,27:33:34.95:825,35,0	1/1:2,22:24:25.08:505,25,0	1/1:0,27:28:74.26:857,74,0
chr10	35313828	.	ATG	A	10484.32	PASS	AB=0.900;AC=39;AF=0.696;AN=56;BaseQRankSum=0.627;DP=833;FS=0.370;HRun=0;HaplotypeScore=119.5725;InbreedingCoeff=0.8388;MQ=58.27;MQ0=12;MQRankSum=0.309;QD=17.89;ReadPosRankSum=1.402;VQSLOD=4.7949;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,32:43:74.70:819,75,0	1/1:4,12:19:44:444,44,0	0/0:25,0:14:5.75:0,6,59	0/0:25,0:13:8.02:0,8,59	0/0:14,1:32:15.63:0,16,435	1/1:1,18:21:47.97:544,48,0	1/1:6,22:29:35.43:423,35,0	1/1:16,7:22:22.40:227,22,0	0/0:9,0:27:50.98:0,51,478	1/1:8,20:29:60.01:679,60,0	1/1:7,14:23:35.94:402,36,0	0/0:20,1:21:3.82:0,4,524	1/1:7,17:23:33.57:389,34,0	1/1:9,33:42:78.06:897,78,0	1/1:10,16:28:41.79:452,42,0	0/0:8,0:21:30.02:0,30,301	0/0:14,0:44:59.30:0,59,697	1/1:9,30:40:61.77:674,62,0	1/1:10,13:23:35.17:374,35,0	1/1:5,12:17:24.07:281,24,0	1/1:26,69:97:99:1796,147,0	1/1:5,13:19:29.92:332,30,0	0/1:16,2:18:31.54:32,0,457	0/0:51,1:50:79.05:0,79,1682	1/1:7,21:29:47.81:522,48,0	1/1:9,21:31:62.60:692,63,0	1/1:4,13:17:38.70:434,39,0	1/1:4,2:6:6.02:71,6,0
chr10	35315450	.	CTG	C	984.16	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=-3.471;DP=798;FS=8.302;HRun=0;HaplotypeScore=128.2540;InbreedingCoeff=0.3982;MQ=56.96;MQ0=29;MQRankSum=3.436;QD=5.93;ReadPosRankSum=2.567;VQSLOD=2.8244;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:32:15.47:0,15,135	0/0:9,0:9:3.15:0,3,15	0/0:74,0:18:6.02:0,6,71	0/0:81,0:24:13.72:0,14,135	0/0:11,0:10:5.64:0,6,47	0/1:17,0:17:4.08:4,0,23	0/0:32,0:32:21.34:0,21,207	0/0:35,0:34:5.61:0,6,43	0/0:16,0:14:7.67:0,8,50	0/0:30,0:30:17.89:0,18,232	0/0:18,0:17:12.44:0,12,116	1/1:11,22:35:7.88:491,8,0	0/0:33,0:33:10.31:0,10,178	0/0:34,0:33:8.36:0,8,95	0/1:32,0:32:5.24:5,0,154	0/0:17,0:16:9.37:0,9,70	0/1:22,0:21:7.74:8,0,61	0/0:37,0:37:18.20:0,18,193	0/0:26,0:25:17.13:0,17,142	0/0:16,0:16:0.80:0,1,113	0/0:29,0:26:1.45:0,1,74	0/0:21,0:21:3.04:0,3,43	1/1:6,10:17:12.03:136,12,0	1/1:12,22:35:44.94:477,45,0	0/0:30,0:30:18.15:0,18,160	0/0:27,0:27:24.75:0,25,268	0/0:22,0:21:13.14:0,13,170	1/1:8,0:8:0.69:2,1,0
chr10	35315482	.	GTC	G	4750.82	PASS	AB=0.990;AC=34;AF=0.607;AN=56;BaseQRankSum=-3.375;DP=725;FS=2.235;HRun=0;HaplotypeScore=121.9250;InbreedingCoeff=-0.2172;MQ=47.65;MQ0=31;MQRankSum=1.776;QD=7.79;ReadPosRankSum=-3.685;VQSLOD=3.5317;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:36:9.25:0,9,355	1/1:6,0:6:11.75:82,12,0	0/0:28,0:2:5.91:0,6,38	0/0:46,0:9:1.30:0,1,97	0/1:25,0:24:61.37:61,0,159	1/1:14,1:15:7.03:70,7,0	1/1:41,0:40:22.55:463,23,0	0/1:24,0:17:52.26:175,0,52	0/1:20,0:17:83.65:84,0,179	0/1:25,0:24:6.99:330,0,7	0/1:16,0:15:4.12:71,0,4	0/1:39,0:39:94.45:94,0,261	0/1:25,0:25:15.43:237,0,15	1/1:34,0:33:47.73:378,48,0	0/1:25,2:27:5.55:296,0,6	0/1:25,0:24:45.62:46,0,141	0/1:26,1:25:99:128,0,125	1/1:37,0:36:6.80:408,7,0	0/1:18,0:18:42.54:167,0,43	0/1:15,1:16:8.98:195,0,9	1/1:38,0:34:44.77:418,45,0	1/1:20,0:19:12.53:203,13,0	0/1:22,0:22:1.80:2,0,162	0/1:37,0:37:86.67:87,0,209	1/1:24,0:24:23.65:248,24,0	0/1:24,0:24:47.55:287,0,48	0/1:19,0:18:19.41:156,0,19	1/1:6,0:5:8.92:65,9,0
chr10	35316851	.	G	GT	8100.34	PASS	AB=0.559;AC=50;AF=0.893;AN=56;BaseQRankSum=-4.655;DP=510;FS=12.305;HRun=9;HaplotypeScore=69.5958;InbreedingCoeff=0.5252;MQ=63.07;MQ0=12;MQRankSum=-1.350;QD=18.79;ReadPosRankSum=4.927;VQSLOD=4.4096;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,1:25:56.48:298,56,0	1/1:1,4:5:12:120,12,0	0/0:40,0:17:20.04:0,20,220	0/0:37,0:17:23.59:0,24,193	1/1:11,0:20:41.58:212,42,0	1/1:0,10:10:24.06:263,24,0	1/1:2,9:11:21.06:232,21,0	1/1:11,24:35:69.11:722,69,0	1/1:8,0:10:16.23:74,16,0	1/1:6,10:16:30.08:332,30,0	1/1:1,13:14:30.04:316,30,0	1/1:4,14:18:4.11:273,4,0	1/1:4,8:12:4.15:263,4,0	0/1:3,11:14:2.25:236,0,2	1/1:3,9:12:0.90:239,1,0	1/1:3,0:19:48.39:245,48,0	1/1:2,2:25:48.91:290,49,0	1/1:1,20:21:48.13:531,48,0	1/1:2,16:17:46.92:492,47,0	1/1:3,15:19:46.58:473,47,0	1/1:6,5:11:9.02:100,9,0	1/1:2,6:9:11.87:114,12,0	0/1:4,15:19:6.34:296,0,6	1/1:0,16:16:33.09:365,33,0	1/1:0,22:22:54.15:597,54,0	1/1:3,20:23:57.13:619,57,0	1/1:3,14:17:27.07:299,27,0	1/1:4,3:7:9.02:99,9,0
chr10	35316874	.	CT	C	494.78	PASS	AB=0.855;AC=13;AF=0.241;AN=54;BaseQRankSum=4.392;DP=447;FS=5.319;HRun=13;HaplotypeScore=82.2896;InbreedingCoeff=0.4492;MQ=55.78;MQ0=14;MQRankSum=-7.520;QD=3.13;ReadPosRankSum=2.930;VQSLOD=0.2902;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:11,10:21:4.14:110,0,4	0/0:6,0:6:11.98:0,12,108	0/1:40,1:13:11.01:11,0,32	0/0:36,0:15:1.23:0,1,42	1/1:9,5:14:11.79:85,12,0	0/1:10,2:12:28.83:29,0,59	0/0:8,0:9:2.21:0,2,43	0/0:19,1:21:13.29:0,13,305	1/1:5,6:10:17.88:131,18,0	0/1:13,1:14:0.87:1,0,149	0/0:10,0:9:6.01:0,6,58	0/0:14,0:15:13.99:0,14,155	0/1:7,1:10:4.03:4,0,113	0/0:11,1:12:17.92:0,18,149	0/0:11,0:12:17.21:0,17,190	1/1:7,9:16:23.46:175,23,0	1/1:12,7:19:14.77:109,15,0	0/0:23,1:24:26.14:0,26,403	0/0:16,0:14:14.45:0,14,165	0/0:15,1:18:38.63:0,39,325	./.	0/0:10,0:8:9.01:0,9,88	0/0:21,1:21:20:0,20,326	0/0:13,0:13:18.01:0,18,166	0/0:22,0:23:20.22:0,20,205	0/0:14,0:14:33.03:0,33,309	0/0:13,0:13:26.95:0,27,239	0/0:6,1:7:2.96:0,3,20
chr10	35317525	.	GTC	G	15569.83	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=12.744;DP=751;FS=0.637;HRun=0;HaplotypeScore=143.8656;InbreedingCoeff=0.9793;MQ=74.69;MQ0=4;MQRankSum=-1.883;QD=34.91;ReadPosRankSum=5.479;VQSLOD=6.4625;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:93.05:0,93,1636	1/1:0,8:8:24.08:325,24,0	0/0:37,0:33:89.64:0,90,1497	0/0:42,0:34:87.21:0,87,1519	0/0:37,0:37:48.16:0,48,859	1/1:0,20:19:54.18:773,54,0	1/1:1,28:29:72.24:1031,72,0	1/1:3,47:50:99:1907,141,0	0/0:27,0:27:51.17:0,51,928	1/1:0,31:31:93.31:1319,93,0	1/1:0,17:17:27.09:387,27,0	0/0:28,0:28:78.25:0,78,1380	1/1:1,26:27:66.22:943,66,0	1/1:0,28:28:63.21:902,63,0	1/1:1,32:32:69.23:988,69,0	0/0:30,0:30:45.14:0,45,781	0/0:13,0:13:18.06:0,18,312	1/1:1,12:13:4.89:441,5,0	1/1:3,17:20:45.11:603,45,0	1/1:1,18:19:51.17:730,51,0	1/1:2,30:32:63.21:902,63,0	1/1:0,15:15:30.10:430,30,0	0/0:18,0:18:48.16:0,48,865	0/0:37,0:37:84.23:0,84,1438	1/1:0,16:16:42.14:602,42,0	1/1:0,35:35:99:1441,105,0	1/1:0,32:32:84.28:1202,84,0	1/1:2,19:21:45.15:644,45,0
chr10	35317555	.	CTCTCTCTCTG	C	824.39	PASS	AB=1.000;AC=9;AF=0.173;AN=52;BaseQRankSum=1.478;DP=661;FS=0.000;HRun=0;HaplotypeScore=276.1347;InbreedingCoeff=0.8638;MQ=52.72;MQ0=8;MQRankSum=-5.473;QD=6.06;ReadPosRankSum=-1.655;VQSLOD=1.5796;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:87.30:0,87,3017	0/0:9,0:9:18.05:0,18,378	./.	0/1:26,0:14:0:0,0,0	1/1:6,27:33:0.25:1,0,0	0/0:21,0:20:33.07:0,33,602	0/0:28,0:27:32.83:0,33,670	0/0:51,0:51:99:0,102,1747	1/1:7,17:24:11.76:281,12,0	0/0:28,0:27:61.53:0,62,1407	./.	0/0:28,0:28:66.21:0,66,2383	0/0:24,0:24:28.64:0,29,624	0/0:23,0:23:39.13:0,39,821	0/0:31,0:31:45.13:0,45,995	1/1:6,27:33:18.02:494,18,0	1/1:5,15:20:9.03:177,9,0	0/0:14,0:14:21.19:0,21,593	0/0:17,0:15:36.07:0,36,705	0/0:17,0:16:30.10:0,30,787	0/0:25,0:24:39.05:0,39,683	0/0:22,0:22:17.49:0,17,427	0/0:14,0:14:39.13:0,39,1569	0/0:29,0:29:54.17:0,54,2158	0/0:13,0:13:30.09:0,30,598	0/0:32,0:31:74.96:0,75,1527	0/0:28,0:28:48.16:0,48,1034	0/0:15,0:15:39.13:0,39,835
chr10	35317581	.	CTG	C	977.60	PASS	AB=0.822;AC=10;AF=0.200;AN=50;BaseQRankSum=5.387;DP=566;FS=6.125;HRun=0;HaplotypeScore=208.2857;InbreedingCoeff=-0.2628;MQ=47.25;MQ0=11;MQRankSum=-6.911;QD=4.96;ReadPosRankSum=-1.486;VQSLOD=1.7979;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,99,1688	0/1:5,1:6:30.61:31,0,98	./.	./.	0/0:33,0:33:15.04:0,15,248	0/0:15,6:19:23.91:0,24,242	0/1:17,3:19:99:122,0,141	0/0:28,0:26:73:0,73,751	0/0:21,0:21:19.70:0,20,256	0/1:17,6:22:99:214,0,471	./.	0/0:29,0:29:69.21:0,69,1270	0/1:14,6:20:99:108,0,136	0/0:15,0:15:29.98:0,30,324	0/1:21,10:31:30.82:31,0,314	0/0:34,0:34:23.91:0,24,288	0/0:24,0:24:26.71:0,27,428	0/1:12,2:14:78.18:78,0,244	0/1:12,3:13:99:131,0,220	0/0:14,3:16:29.96:0,30,307	0/0:18,3:20:0.04:0,0,215	0/0:16,4:19:17.93:0,18,227	0/0:20,0:20:54.15:0,54,934	0/0:27,0:27:60.07:0,60,1140	0/0:10,3:13:17.97:0,18,166	0/1:27,5:30:99:234,0,414	0/1:13,8:21:99:157,0,236	0/1:13,2:15:6.76:7,0,333
chr10	35317607	.	GTC	G	248.15	PASS	AB=0.895;AC=11;AF=0.196;AN=56;BaseQRankSum=3.364;DP=523;FS=7.402;HRun=0;HaplotypeScore=156.8826;InbreedingCoeff=-0.2106;MQ=58.18;MQ0=11;MQRankSum=-0.906;QD=1.17;ReadPosRankSum=2.439;VQSLOD=2.2286;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:29,4:32:16.91:17,0,681	0/0:3,0:3:9.01:0,9,102	0/0:20,0:10:23.25:0,23,289	0/0:44,0:23:10.35:0,10,153	0/1:20,1:21:8.45:8,0,345	0/1:11,0:10:0.09:0,0,0	0/0:18,1:18:29.17:0,29,497	0/0:23,2:22:19.11:0,19,682	0/1:25,2:27:28.96:29,0,492	0/1:10,1:11:4.93:5,0,364	0/0:9,0:9:18.06:0,18,279	0/0:26,3:29:9.57:0,10,598	0/1:10,4:14:99:111,0,195	0/0:8,0:8:6.92:0,7,174	0/0:23,3:26:1.12:0,1,408	0/1:33,4:38:40.65:41,0,591	0/1:24,2:27:72.44:72,0,516	0/1:10,0:10:8.10:8,0,279	0/0:19,0:18:41.53:0,42,535	0/0:12,0:12:21.07:0,21,310	0/0:13,3:16:6.02:0,6,93	0/0:7,0:6:5.92:0,6,89	0/0:20,0:20:36.12:0,36,569	0/0:24,4:28:3.59:0,4,506	0/0:6,0:7:9.03:0,9,136	0/0:17,0:16:45.14:0,45,645	0/1:13,3:16:29.63:30,0,388	0/1:2,1:3:26.91:61,0,27
chr10	35317805	.	C	CAA	10491.24	PASS	AB=0.557;AC=51;AF=0.911;AN=56;BaseQRankSum=-1.983;DP=553;FS=8.530;HRun=11;HaplotypeScore=84.8571;InbreedingCoeff=0.5729;MQ=75.27;MQ0=0;MQRankSum=-4.074;QD=19.87;ReadPosRankSum=0.781;VQSLOD=3.7108;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:7,2:34:8.39:166,0,8	1/1:1,4:6:15.04:197,15,0	0/0:14,0:14:4.73:0,5,43	0/0:9,1:10:1.82:0,2,26	1/1:10,24:36:66.37:741,66,0	1/1:3,11:14:15.05:213,15,0	1/1:5,13:21:30.06:396,30,0	1/1:12,13:26:38.53:489,39,0	1/1:6,8:19:25:229,25,0	1/1:4,12:18:30.07:401,30,0	1/1:2,11:14:36.80:387,37,0	1/1:3,12:15:24.08:342,24,0	1/1:3,12:16:12.03:154,12,0	1/1:3,7:13:12:145,12,0	1/1:5,17:25:31.92:384,32,0	1/1:1,22:23:39.13:564,39,0	1/1:3,25:29:45.15:637,45,0	1/1:4,16:22:38.07:469,38,0	1/1:7,20:29:71.07:844,71,0	1/1:15,0:17:31.94:264,32,0	1/1:1,8:11:23.56:298,24,0	1/1:0,9:12:17.85:216,18,0	1/1:14,2:16:18.04:207,18,0	1/1:5,14:20:35.61:487,36,0	1/1:2,16:19:30.10:435,30,0	1/1:1,18:21:57.50:726,58,0	1/1:7,19:28:29.54:366,30,0	1/1:4,17:24:53.66:735,54,0
chr10	35318809	.	C	CAG	26343.22	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-7.105;DP=590;FS=3.113;HRun=0;HaplotypeScore=65.4107;InbreedingCoeff=0.8549;MQ=78.25;MQ0=8;MQRankSum=-6.144;QD=47.38;ReadPosRankSum=5.088;VQSLOD=6.4096;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,30:29:75.26:1373,75,0	1/1:0,10:10:30.10:550,30,0	0/0:18,0:18:0.40:0,0,347	0/0:16,0:16:30.52:0,31,370	1/1:2,20:22:45.15:825,45,0	1/1:1,35:37:90.31:1649,90,0	1/1:0,17:17:48.16:880,48,0	1/1:4,26:30:78.23:1345,78,0	1/1:1,16:17:45.15:825,45,0	1/1:0,19:19:57.20:1030,57,0	1/1:0,21:21:54.19:990,54,0	1/1:1,13:13:39.13:714,39,0	1/1:2,17:18:45.15:825,45,0	1/1:2,22:23:54.19:990,54,0	1/1:1,26:26:69.24:1263,69,0	1/1:3,17:20:48.16:879,48,0	1/1:2,23:25:69.24:1264,69,0	1/1:1,23:24:66.23:1194,66,0	1/1:3,14:17:42.14:763,42,0	1/1:1,23:24:69.24:1261,69,0	1/1:1,19:20:54.19:990,54,0	1/1:2,18:20:54.19:989,54,0	1/1:1,18:20:57.20:1042,57,0	1/1:0,16:16:48.16:879,48,0	1/1:2,19:21:51.17:915,51,0	1/1:3,23:26:69.24:1262,69,0	1/1:2,14:16:39.13:714,39,0	1/1:0,17:17:51.17:933,51,0
chr10	35318930	.	T	TGAGAGA	293.70	PASS	AB=0.951;AC=11;AF=0.220;AN=50;BaseQRankSum=3.418;DP=377;FS=0.000;HRun=0;HaplotypeScore=93.2074;InbreedingCoeff=0.5009;MQ=46.53;MQ0=23;MQRankSum=-1.217;QD=3.30;ReadPosRankSum=-2.819;VQSLOD=1.1905;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:17:3.01:0,3,54	0/0:10,0:10:1.04:0,1,38	./.	./.	0/1:15,0:14:0.08:0,0,0	0/0:20,0:19:12.04:0,12,219	0/0:17,0:16:5.97:0,6,80	0/1:11,0:9:0:0,0,0	1/1:4,0:4:0.25:0,0,0	0/0:15,0:16:9.77:0,10,153	0/0:14,0:14:24.08:0,24,404	1/1:13,0:12:12.51:268,13,0	0/0:10,0:10:5.75:0,6,103	0/0:15,0:12:5.75:0,6,105	0/0:16,0:15:11.56:0,12,181	1/1:6,0:5:2.84:32,3,0	0/0:8,0:7:2.10:0,2,19	0/0:22,0:19:6.84:0,7,186	0/0:5,0:5:6.02:0,6,112	0/0:14,0:13:11.71:0,12,180	0/0:24,0:23:12.51:0,13,207	0/0:21,0:21:18.06:0,18,341	1/1:16,1:15:6.02:104,6,0	0/1:19,2:19:0:0,0,0	0/0:12,0:12:17.94:0,18,254	0/0:11,0:11:12.04:0,12,191	0/0:17,0:17:11.69:0,12,143	./.
chr10	35319792	.	TC	T	683.69	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.813;DP=546;FS=2.973;HRun=2;HaplotypeScore=50.0637;InbreedingCoeff=0.9974;MQ=85.98;MQ0=0;MQRankSum=-2.911;QD=32.56;ReadPosRankSum=0.666;VQSLOD=3.3343;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,21:21:60.20:779,60,0	0/0:9,0:9:27.09:0,27,405	0/0:19,0:19:51.16:0,51,742	0/0:16,0:16:48.13:0,48,680	0/0:25,0:25:75.25:0,75,1124	0/0:28,0:28:84.24:0,84,1198	0/0:17,0:17:48.16:0,48,719	0/0:31,0:31:93.31:0,93,1392	0/0:20,0:20:57.19:0,57,852	0/0:27,0:27:75.25:0,75,1105	0/0:25,0:25:75.25:0,75,1121	0/0:11,0:11:30.10:0,30,447	0/0:17,0:17:45.15:0,45,668	0/0:11,0:11:33.11:0,33,494	0/0:18,0:18:54.17:0,54,787	0/0:17,0:17:51.17:0,51,764	0/0:12,0:12:36.12:0,36,539	0/0:14,0:14:42.10:0,42,601	0/0:20,0:20:54.17:0,54,790	0/0:31,0:31:90.30:0,90,1348	0/0:17,0:17:48.15:0,48,698	0/0:12,0:12:30.09:0,30,429	0/0:13,0:13:39.13:0,39,581	0/0:22,0:22:66.18:0,66,961	0/0:24,0:24:72.24:0,72,1079	0/0:33,0:33:99:0,99,1482	0/0:20,0:20:60.20:0,60,892	0/0:16,0:16:48.16:0,48,719
chr10	35320150	.	TA	T	2237.46	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=9.178;DP=636;FS=9.211;HRun=1;HaplotypeScore=65.5151;InbreedingCoeff=0.9981;MQ=71.17;MQ0=1;MQRankSum=-2.199;QD=24.32;ReadPosRankSum=2.175;VQSLOD=2.8473;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,22:26:49.95:656,50,0	0/0:14,0:14:37.51:0,38,472	0/0:20,0:17:19.57:0,20,488	0/0:16,0:15:32.09:0,32,381	0/0:27,0:27:77.92:0,78,896	0/0:16,0:16:43.51:0,44,533	0/0:34,0:34:99:0,102,1204	0/0:31,0:31:93.28:0,93,1168	0/0:17,0:17:51.15:0,51,646	0/0:15,0:15:45.05:0,45,491	0/0:22,0:22:66.10:0,66,802	1/1:8,13:21:57.11:704,57,0	0/0:15,0:15:45.12:0,45,553	0/0:18,0:18:54.12:0,54,642	0/0:28,0:28:84.22:0,84,1030	0/0:31,0:31:93.19:0,93,1126	0/0:28,0:28:84.10:0,84,961	0/0:19,0:19:54.03:0,54,661	0/0:23,0:23:69.02:0,69,779	0/0:30,0:30:89.82:0,90,1085	0/0:27,0:27:81.21:0,81,1001	0/0:13,0:13:39.10:0,39,475	1/1:3,19:22:32.59:376,33,0	1/1:10,13:23:54.19:661,54,0	0/0:29,0:29:84.17:0,84,1015	0/0:33,0:33:99:0,99,1215	0/0:27,0:27:81.25:0,81,1031	0/0:11,0:11:31.31:0,31,360
chr10	35321206	.	TC	T	19126.86	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=14.393;DP=855;FS=1.436;HRun=2;HaplotypeScore=83.9800;InbreedingCoeff=1.0000;MQ=83.34;MQ0=1;MQRankSum=-3.085;QD=36.09;ReadPosRankSum=1.475;VQSLOD=5.4199;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,108,1597	1/1:0,16:16:45.15:584,45,0	0/0:27,0:27:77.87:0,78,1093	0/0:25,0:24:62.79:0,63,849	0/0:32,0:32:93.30:0,93,1372	1/1:0,19:19:51.17:662,51,0	1/1:0,25:25:72.23:935,72,0	1/1:0,41:41:99:1584,123,0	0/0:41,0:41:99:0,120,1797	1/1:0,38:38:99:1448,114,0	1/1:1,21:22:60.20:779,60,0	0/0:30,0:30:90.30:0,90,1322	1/1:1,26:27:81.26:1045,81,0	1/1:0,33:33:99:1285,99,0	1/1:0,54:54:99:1870,144,0	0/0:40,0:39:99:0,120,1797	0/0:38,0:38:99:0,108,1615	1/1:0,28:28:75.24:974,75,0	1/1:1,23:24:69.20:870,69,0	1/1:0,37:37:99:1324,108,0	1/1:0,34:34:90.29:1169,90,0	1/1:1,21:22:51.64:663,52,0	0/0:23,0:23:66.22:0,66,989	0/0:33,0:33:96.31:0,96,1419	1/1:0,27:27:72.23:935,72,0	1/1:0,29:29:87.28:1130,87,0	1/1:1,34:35:96.31:1246,96,0	1/1:0,19:19:48.16:623,48,0
chr10	35323533	.	CT	C	3468.51	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=4.551;DP=551;FS=2.619;HRun=1;HaplotypeScore=75.4593;InbreedingCoeff=0.9836;MQ=75.64;MQ0=0;MQRankSum=-1.926;QD=37.70;ReadPosRankSum=3.889;VQSLOD=4.3161;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,30:30:84.28:1174,84,0	0/0:7,0:7:21.07:0,21,336	0/0:16,0:16:48.15:0,48,745	0/0:14,0:14:39.11:0,39,547	0/0:7,0:7:18.05:0,18,265	0/0:15,0:15:42.14:0,42,671	0/0:24,0:24:72.17:0,72,1098	0/0:25,0:25:72.17:0,72,1054	0/0:21,0:21:63.21:0,63,1002	0/0:17,0:17:51.17:0,51,813	0/0:18,0:18:51.16:0,51,790	1/1:0,28:28:81.27:1125,81,0	0/0:19,0:19:57.19:0,57,909	0/0:26,0:26:75.23:0,75,1172	0/0:25,0:25:75.22:0,75,1142	0/0:20,0:20:60.20:0,60,956	0/0:28,0:28:84.29:0,84,1342	0/0:27,0:27:78.23:0,78,1220	0/0:18,0:18:54.17:0,54,819	0/0:17,0:17:48.16:0,48,767	0/0:54,0:54:99:0,141,2200	0/0:12,0:12:36.12:0,36,575	1/1:0,8:8:15:210,15,0	1/1:0,26:26:69.23:960,69,0	0/0:14,0:14:39.13:0,39,622	0/0:15,0:15:45.15:0,45,719	0/0:16,0:16:48.15:0,48,744	0/0:4,0:4:12.04:0,12,192
chr10	35323590	.	GA	G	10842.59	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-8.991;DP=437;FS=24.811;HRun=1;HaplotypeScore=75.3988;InbreedingCoeff=0.9630;MQ=72.92;MQ0=0;MQRankSum=-3.149;QD=38.18;ReadPosRankSum=-1.668;VQSLOD=2.5883;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:8.96:0,9,203	1/1:1,1:2:5.99:63,6,0	0/0:13,0:12:33.07:0,33,483	0/0:10,0:10:30.08:0,30,427	0/0:7,0:7:20.26:0,20,121	1/1:1,12:13:39.13:539,39,0	1/1:3,20:23:69.19:927,69,0	1/1:0,14:14:41.98:490,42,0	0/0:22,0:22:64.08:0,64,374	1/1:1,12:13:38.86:510,39,0	1/1:2,6:8:18.06:243,18,0	0/0:25,0:25:20.97:0,21,323	1/1:2,12:14:42.14:584,42,0	1/1:1,26:27:78.24:1070,78,0	1/1:2,23:24:75.23:1022,75,0	0/0:17,0:17:49.52:0,50,283	0/0:15,0:15:40.90:0,41,242	1/1:0,13:13:36.12:503,36,0	1/1:1,10:11:29.77:382,30,0	1/1:1,14:15:36.12:503,36,0	1/1:2,41:43:99:1475,108,0	1/1:0,8:8:24.08:335,24,0	0/0:7,0:7:11.65:0,12,71	0/0:20,0:20:53.60:0,54,306	1/1:2,13:15:42.10:547,42,0	1/1:1,16:17:51.16:689,51,0	1/1:0,19:19:57.19:795,57,0	1/1:0,4:4:12.04:168,12,0
chr10	35323654	.	AG	A	7488.83	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=4.471;DP=329;FS=13.716;HRun=1;HaplotypeScore=49.8974;InbreedingCoeff=0.9589;MQ=68.91;MQ0=2;MQRankSum=-2.680;QD=37.63;ReadPosRankSum=-1.008;VQSLOD=3.3576;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:51.15:0,51,789	1/1:0,3:3:9.03:126,9,0	0/0:14,0:11:30.07:0,30,453	0/0:13,0:11:30.10:0,30,462	0/0:9,0:9:27.08:0,27,407	1/1:0,12:12:33.11:461,33,0	1/1:6,14:20:57.19:789,57,0	1/1:1,11:11:33.10:443,33,0	0/0:13,0:13:39.13:0,39,616	1/1:0,7:7:21.07:294,21,0	1/1:0,8:8:15.05:210,15,0	0/0:21,0:21:63.21:0,63,999	1/1:0,16:16:42.14:586,42,0	1/1:1,19:20:60.20:837,60,0	1/1:1,19:20:60.19:816,60,0	0/0:15,0:15:42.14:0,42,664	0/0:7,0:7:21.07:0,21,336	1/1:0,6:6:15.05:209,15,0	1/1:3,4:6:15.05:208,15,0	1/1:0,4:4:9.03:126,9,0	1/1:0,23:23:60.20:836,60,0	1/1:0,7:7:21.07:293,21,0	0/0:4,0:4:9.03:0,9,144	0/0:17,0:17:51.17:0,51,815	1/1:1,6:7:18.06:251,18,0	1/1:1,7:8:24.08:333,24,0	1/1:0,13:13:36.12:503,36,0	1/1:0,5:5:12.04:168,12,0
chr10	35324935	.	C	CT	3585.10	PASS	AB=0.665;AC=29;AF=0.518;AN=56;BaseQRankSum=-10.942;DP=640;FS=0.791;HRun=14;HaplotypeScore=90.7400;InbreedingCoeff=0.3530;MQ=78.00;MQ0=3;MQRankSum=2.614;QD=8.74;ReadPosRankSum=-1.870;VQSLOD=2.5763;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,4:36:14.16:0,14,337	1/1:1,5:7:14.81:113,15,0	0/1:34,0:24:1.77:2,0,132	0/0:31,0:20:9.73:0,10,63	0/0:6,0:30:48.69:0,49,141	1/1:6,14:24:23.62:298,24,0	0/1:5,16:23:9.06:256,0,9	1/1:17,14:31:17.31:225,17,0	0/0:5,0:18:24.19:0,24,70	0/1:11,15:26:8.19:243,0,8	0/1:10,13:24:2.95:192,0,3	0/0:13,0:15:28.49:0,28,176	1/1:4,13:18:20.02:187,20,0	0/1:2,10:12:4.27:90,0,4	0/1:7,9:16:36.72:85,0,37	0/0:3,0:31:54.86:0,55,158	0/0:3,0:32:54.86:0,55,158	1/1:12,9:21:1.61:158,2,0	0/1:11,8:20:9.39:126,0,9	0/1:17,17:33:7.91:265,0,8	1/1:3,5:8:10.61:70,11,0	1/1:8,10:18:7.57:180,8,0	0/0:12,1:13:0.23:0,0,127	0/0:23,0:23:50.07:0,50,321	0/1:7,15:23:11.08:260,0,11	1/1:12,15:28:6.46:304,6,0	1/1:7,26:33:24.30:451,24,0	1/1:2,5:7:10.24:82,10,0
chr10	35325152	.	A	AAACT	6943.58	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-13.664;DP=586;FS=0.889;HRun=0;HaplotypeScore=87.4267;InbreedingCoeff=0.9980;MQ=72.76;MQ0=2;MQRankSum=-1.602;QD=62.55;ReadPosRankSum=0.472;VQSLOD=6.7117;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,102,1836	0/0:11,0:11:33.11:0,33,597	0/0:17,0:16:36.06:0,36,619	0/0:17,0:15:36.07:0,36,583	1/1:1,26:29:66.18:1683,66,0	0/0:15,0:15:39.13:0,39,711	0/0:20,0:20:48.16:0,48,858	0/0:29,0:29:66.21:0,66,1143	1/1:1,29:30:78.27:2059,78,0	0/0:14,0:14:42.14:0,42,770	0/0:15,0:15:39.11:0,39,657	0/0:13,0:13:33.11:0,33,607	0/0:23,0:23:66.23:0,66,1214	0/0:21,0:21:48.16:0,48,861	0/0:21,0:21:54.19:0,54,989	1/1:2,17:20:45.15:1188,45,0	1/1:2,30:32:78.27:2013,78,0	0/0:19,0:19:51.17:0,51,921	0/0:22,0:20:48.16:0,48,857	0/0:25,0:25:72.25:0,72,1319	0/0:35,0:35:99:0,99,1791	0/0:9,0:9:21.07:0,21,354	0/0:12,0:12:27.09:0,27,497	0/0:19,0:19:48.16:0,48,883	0/0:16,0:16:48.16:0,48,883	0/0:27,0:27:78.27:0,78,1432	0/0:30,0:30:78.24:0,78,1369	0/0:9,0:9:27.09:0,27,497
chr10	35325754	.	TC	T	1838.77	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=7.751;DP=510;FS=3.401;HRun=8;HaplotypeScore=58.5656;InbreedingCoeff=0.9778;MQ=79.24;MQ0=1;MQRankSum=-0.942;QD=23.28;ReadPosRankSum=3.100;VQSLOD=4.4545;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:84.20:0,84,971	0/0:6,0:6:15.05:0,15,181	0/0:23,0:21:44.86:0,45,517	0/0:25,0:23:27.40:0,27,284	1/1:1,22:23:66.11:637,66,0	0/0:11,0:11:24.07:0,24,286	0/0:17,0:17:51.13:0,51,592	0/0:23,0:23:54.14:0,54,626	1/1:1,10:11:30.05:290,30,0	0/0:14,0:14:42.13:0,42,507	0/0:22,0:22:60.18:0,60,723	0/0:15,0:15:39.12:0,39,471	0/0:16,0:16:48.13:0,48,566	0/0:15,0:15:37.73:0,38,458	0/0:19,0:19:51.14:0,51,605	1/1:3,17:20:51.08:493,51,0	1/1:1,24:25:60.10:579,60,0	0/0:14,0:14:39.12:0,39,471	0/0:19,0:19:39.10:0,39,458	0/0:18,1:19:28.19:0,28,617	0/0:21,0:21:60.17:0,60,707	0/0:8,0:8:24.07:0,24,290	0/0:14,0:14:42.13:0,42,507	0/0:23,0:23:69.21:0,69,832	0/0:22,0:22:57.16:0,57,674	0/0:23,0:23:66.20:0,66,797	0/0:27,1:28:55.28:0,55,949	0/0:3,0:3:9.03:0,9,109
chr10	35325896	.	AAAAAG	A	1900.75	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=6.743;DP=610;FS=2.086;HRun=0;HaplotypeScore=119.5213;InbreedingCoeff=0.8322;MQ=65.17;MQ0=3;MQRankSum=0.466;QD=21.60;ReadPosRankSum=1.594;VQSLOD=3.5515;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:81.01:0,81,2158	0/0:6,0:6:15.05:0,15,411	0/1:27,0:19:16.94:17,0,397	0/0:22,0:14:18.94:0,19,287	0/0:20,0:20:48.14:0,48,1239	0/0:14,0:14:39.13:0,39,1073	0/0:24,0:24:51.17:0,51,1370	0/0:30,0:30:49.22:0,49,1323	0/0:17,0:17:51.16:0,51,1382	0/0:26,0:26:66.23:0,66,1873	0/0:15,0:15:36.12:0,36,956	1/1:2,16:18:39.13:689,39,0	0/0:21,0:21:57.20:0,57,1517	0/0:26,0:26:66.23:0,66,1843	0/0:25,0:25:63.20:0,63,1686	0/0:27,0:27:81.26:0,81,2176	0/0:38,0:38:93.32:0,93,2529	0/0:18,0:17:46.31:0,46,1101	0/0:12,0:11:27.09:0,27,737	0/0:28,0:28:75.23:0,75,1972	0/0:18,0:18:42.11:0,42,946	0/0:9,0:9:24.08:0,24,681	1/1:2,15:17:28.30:522,28,0	1/1:6,20:26:45.15:822,45,0	0/0:16,0:16:45.15:0,45,1121	0/0:27,0:27:54.18:0,54,1487	0/0:31,0:31:75.26:0,75,2089	0/0:16,0:16:42.13:0,42,983
chr10	35326479	.	T	TTTG	8031.63	PASS	AB=0.958;AC=39;AF=0.696;AN=56;BaseQRankSum=-8.385;DP=753;FS=10.839;HRun=0;HaplotypeScore=113.6248;InbreedingCoeff=0.7606;MQ=66.54;MQ0=4;MQRankSum=7.604;QD=14.87;ReadPosRankSum=0.965;VQSLOD=4.1559;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:12,0:23:0.89:2,1,0	1/1:3,7:10:8.95:134,9,0	0/0:30,0:23:12.04:0,12,156	0/0:19,0:14:9:0,9,99	0/0:11,0:38:2.94:0,3,21	1/1:9,11:20:15.05:292,15,0	1/1:8,10:18:6.02:117,6,0	1/1:43,0:43:29.93:310,30,0	0/0:4,0:27:23.57:0,24,151	1/1:17,13:32:48.15:762,48,0	1/1:10,7:17:17.97:234,18,0	0/0:11,0:27:14.88:0,15,105	1/1:12,22:34:12.04:233,12,0	1/1:15,18:34:36.12:698,36,0	1/1:12,18:30:21.07:409,21,0	0/0:6,0:23:17.19:0,17,107	0/0:6,0:26:11.73:0,12,76	1/1:17,18:35:18.04:624,18,0	1/1:17,1:34:29.79:308,30,0	1/1:10,22:32:46.43:715,46,0	1/1:6,14:20:24.08:454,24,0	1/1:7,15:22:12.44:585,12,0	0/0:7,0:21:0.75:0,1,2	0/1:5,1:23:15.11:52,0,15	1/1:11,12:24:24.08:467,24,0	1/1:14,21:35:62.75:994,63,0	1/1:16,19:34:17.71:350,18,0	1/1:10,8:18:15.05:292,15,0
chr10	35327853	.	A	ACACACACACT	7875.33	PASS	AB=0.615;AC=44;AF=0.786;AN=56;BaseQRankSum=1.472;DP=674;FS=16.986;HRun=0;HaplotypeScore=166.7188;InbreedingCoeff=0.1464;MQ=64.62;MQ0=11;MQRankSum=-4.821;QD=13.15;ReadPosRankSum=2.116;VQSLOD=3.0911;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:6,0:40:6.02:171,6,0	1/1:1,0:6:3.01:62,3,0	0/0:34,0:21:46.32:0,46,512	0/0:41,0:28:60.31:0,60,693	1/1:12,0:12:11.99:100,12,0	0/1:7,0:21:35.24:142,0,35	0/1:2,0:21:12.45:51,0,12	1/1:28,0:28:75.11:796,75,0	0/1:11,0:25:4.50:341,0,4	1/1:7,0:23:63.44:842,63,0	0/1:1,0:7:0:0,0,0	1/1:7,2:37:13.36:507,13,0	1/1:5,0:21:18.53:359,19,0	0/1:4,0:22:16.45:66,0,16	1/1:6,0:34:24.68:448,25,0	0/1:4,0:35:27.29:178,0,27	1/1:23,0:27:62.77:887,63,0	0/1:3,0:25:37.93:136,0,38	1/1:7,0:24:15.75:444,16,0	1/1:2,0:10:6:92,6,0	1/1:4,0:46:7.82:73,8,0	1/1:3,0:15:18.06:341,18,0	1/1:6,0:15:6.38:258,6,0	1/1:2,24:33:3.01:17,3,0	1/1:6,0:17:8.67:148,9,0	1/1:6,0:24:67.51:858,68,0	1/1:4,0:23:29.99:500,30,0	0/1:5,0:5:32.97:56,0,33
chr10	35328095	.	GT	G	9740.55	PASS	AB=1.000;AC=45;AF=0.804;AN=56;BaseQRankSum=-3.599;DP=608;FS=10.697;HRun=8;HaplotypeScore=87.4338;InbreedingCoeff=0.8790;MQ=66.94;MQ0=8;MQRankSum=-2.624;QD=19.68;ReadPosRankSum=1.407;VQSLOD=4.2283;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,33:42:78.01:743,78,0	1/1:4,1:5:15.02:145,15,0	0/1:21,0:15:8.11:8,0,222	0/0:18,0:11:14.95:0,15,162	0/0:21,0:20:48.12:0,48,545	1/1:11,5:16:47.15:416,47,0	1/1:17,10:27:64.88:601,65,0	1/1:9,32:40:89.27:828,89,0	0/0:20,0:20:51.16:0,51,615	1/1:5,23:27:69.08:656,69,0	1/1:15,9:23:52.02:468,52,0	1/1:11,12:23:8.23:332,8,0	1/1:6,5:11:31.27:285,31,0	1/1:13,5:18:38.41:355,38,0	1/1:14,11:24:61.64:583,62,0	0/0:28,0:28:69.18:0,69,804	0/0:26,0:25:63.17:0,63,746	1/1:9,5:14:32.54:298,33,0	1/1:11,10:21:48.06:460,48,0	1/1:13,9:21:45.89:453,46,0	1/1:10,1:10:15.19:194,15,0	1/1:9,12:21:49.28:455,49,0	1/1:5,16:20:51.07:488,51,0	1/1:7,10:17:30.04:286,30,0	1/1:24,9:32:51.09:624,51,0	1/1:9,8:17:38.65:357,39,0	1/1:11,9:20:44.35:385,44,0	1/1:8,7:15:28.66:318,29,0
chr10	35328103	.	TG	T	1935.77	PASS	AB=0.991;AC=34;AF=0.607;AN=56;BaseQRankSum=3.910;DP=630;FS=7.800;HRun=1;HaplotypeScore=119.6026;InbreedingCoeff=0.0655;MQ=60.34;MQ0=8;MQRankSum=-2.347;QD=3.74;ReadPosRankSum=5.655;VQSLOD=0.2358;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:45,1:46:79.82:111,0,80	0/1:7,0:7:12.81:15,0,13	0/1:17,1:11:22.90:23,0,149	0/0:16,1:9:19.93:0,20,188	0/0:23,0:22:59.79:0,60,613	0/1:19,0:19:1.95:125,0,2	1/1:23,0:23:12.83:85,13,0	0/1:38,0:37:5.33:103,0,5	0/0:21,0:21:54.14:0,54,644	0/1:30,0:29:26.52:77,0,27	1/1:24,2:25:9.71:161,10,0	1/1:22,0:21:34.73:151,35,0	1/1:12,1:13:6.92:111,7,0	1/1:19,0:19:4.04:87,4,0	0/1:28,0:27:41.30:110,0,41	0/0:25,0:25:69:0,69,808	0/0:26,0:25:72.13:0,72,826	1/1:14,0:14:0.53:34,1,0	0/1:19,0:19:27.53:67,0,28	0/1:27,0:26:19.83:96,0,20	0/1:15,0:14:24.71:33,0,25	1/1:23,0:23:37.18:143,37,0	0/1:23,1:22:30.15:65,0,30	1/1:21,0:21:5.71:41,6,0	1/1:32,0:30:18.14:162,18,0	0/1:18,0:18:33.39:40,0,33	1/1:21,0:21:16.65:134,17,0	1/1:14,0:14:31.33:141,31,0
chr10	35328111	.	G	GT	4518.57	PASS	AB=0.870;AC=38;AF=0.679;AN=56;BaseQRankSum=-3.743;DP=626;FS=3.015;HRun=14;HaplotypeScore=108.2939;InbreedingCoeff=0.3759;MQ=56.00;MQ0=8;MQRankSum=-2.083;QD=9.34;ReadPosRankSum=-2.966;VQSLOD=3.3786;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:43:55.75:0,56,407	1/1:4,2:6:11.99:103,12,0	0/1:18,0:9:9.99:24,0,10	0/1:15,0:6:0:0,0,0	0/0:4,0:23:27.23:0,27,78	0/1:16,2:20:12.28:237,0,12	0/1:18,2:20:18.83:189,0,19	0/1:30,4:34:5.94:283,0,6	0/0:2,0:22:32.59:0,33,94	0/1:27,4:32:48.91:132,0,49	0/1:20,6:26:18.23:259,0,18	1/1:13,0:19:34.81:221,35,0	1/1:9,3:12:6.09:150,6,0	1/1:18,3:21:19.08:286,19,0	1/1:22,3:27:8.06:235,8,0	0/0:8,0:24:30.31:0,30,88	0/0:6,0:28:32.55:0,33,94	1/1:11,3:15:10.55:200,11,0	1/1:12,3:15:17.99:154,18,0	1/1:23,5:28:6.09:300,6,0	1/1:10,3:12:11.83:166,12,0	1/1:22,3:25:27.72:225,28,0	1/1:16,2:24:20.31:218,20,0	1/1:8,0:24:18.55:107,19,0	1/1:28,3:29:45.93:403,46,0	1/1:6,12:18:29.97:256,30,0	1/1:16,5:21:18.06:225,18,0	0/1:7,5:12:12.32:146,0,12
chr10	35329247	.	AT	A	5744.33	PASS	AB=0.810;AC=38;AF=0.679;AN=56;BaseQRankSum=9.152;DP=640;FS=8.504;HRun=12;HaplotypeScore=105.1678;InbreedingCoeff=0.6992;MQ=83.22;MQ0=4;MQRankSum=-0.553;QD=13.84;ReadPosRankSum=3.805;VQSLOD=4.5136;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,1:42:84.12:0,84,959	1/1:1,10:11:23.90:186,24,0	0/0:70,0:43:17.25:0,17,295	0/0:40,0:26:7.83:0,8,174	0/1:18,3:21:38.65:39,0,367	1/1:2,23:26:70.77:540,71,0	1/1:4,13:18:37.87:284,38,0	1/1:6,16:23:25.69:366,26,0	0/0:31,0:31:81.12:0,81,798	1/1:3,15:18:41.81:324,42,0	1/1:4,18:23:37.80:284,38,0	0/1:14,2:16:4.52:5,0,290	1/1:4,13:17:40.58:322,41,0	1/1:5,14:20:46.81:351,47,0	1/1:5,16:21:47.80:371,48,0	0/0:14,0:14:33.06:0,33,329	0/1:15,2:17:6.55:7,0,270	1/1:3,17:20:20.31:335,20,0	1/1:4,16:21:19.38:321,19,0	1/1:7,23:30:7.81:426,8,0	1/1:3,13:19:36.86:260,37,0	0/1:4,9:14:4.51:142,0,5	0/0:9,0:12:26.35:0,26,241	0/0:14,0:15:38.90:0,39,373	1/1:5,13:18:29.84:231,30,0	1/1:11,20:31:19.76:449,20,0	1/1:6,20:26:29.27:407,29,0	1/1:1,4:5:11.95:93,12,0
chr10	35331514	.	A	ATCG	3949.72	PASS	AB=0.933;AC=7;AF=0.125;AN=56;BaseQRankSum=-0.526;DP=723;FS=0.482;HRun=0;HaplotypeScore=106.6892;InbreedingCoeff=0.8259;MQ=85.55;MQ0=0;MQRankSum=-4.600;QD=39.11;ReadPosRankSum=-1.613;VQSLOD=4.2359;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,156,2513	0/0:13,0:13:39.13:0,39,665	0/0:30,0:31:46.53:0,47,1234	0/0:23,0:23:47.09:0,47,770	0/0:24,0:24:72.22:0,72,1199	0/0:25,0:25:72.20:0,72,1186	0/0:26,0:26:75.19:0,75,1172	0/0:29,0:29:84.28:0,84,1380	0/0:32,0:32:90.28:0,90,1481	0/0:30,0:30:84.29:0,84,1417	0/0:8,0:8:24.08:0,24,409	1/1:8,25:33:93.25:1962,93,0	0/0:23,0:23:69.24:0,69,1169	0/0:33,0:33:99:0,99,1657	0/0:38,0:38:99:0,108,1831	0/0:29,0:29:87.28:0,87,1457	0/1:26,2:28:62.91:63,0,1089	0/0:29,1:30:18.68:0,19,1287	0/0:16,0:16:48.13:0,48,734	0/0:20,0:20:54.18:0,54,914	0/0:41,0:41:99:0,117,1925	0/0:21,0:21:63.22:0,63,1062	1/1:2,12:15:36.12:823,36,0	1/1:2,23:25:48.03:1102,48,0	0/0:19,0:19:51.17:0,51,864	0/0:22,0:22:63.21:0,63,1034	0/0:30,0:30:90.31:0,90,1529	0/0:4,0:4:12.04:0,12,204
chr10	35331559	.	AGATT	A	2526.45	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=10.855;DP=690;FS=2.465;HRun=0;HaplotypeScore=122.3628;InbreedingCoeff=0.9878;MQ=94.52;MQ0=0;MQRankSum=-7.068;QD=43.56;ReadPosRankSum=1.979;VQSLOD=4.4124;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,147,3723	0/0:16,0:16:48.16:0,48,1212	0/0:28,0:28:75.15:0,75,1670	0/0:36,0:36:86.25:0,86,1781	0/0:23,0:23:69.24:0,69,1781	0/0:26,0:26:63.20:0,63,1577	0/0:27,0:27:78.27:0,78,2075	0/0:15,0:15:39.13:0,39,999	0/0:35,0:35:96.33:0,96,2531	0/0:24,0:24:69.23:0,69,1752	0/0:14,0:14:42.14:0,42,1087	1/1:2,27:29:81.26:1459,81,0	0/0:20,0:20:57.20:0,57,1481	0/0:28,0:28:81.28:0,81,2121	0/0:33,0:33:99:0,99,2641	0/0:35,0:35:99:0,102,2552	0/0:20,0:20:60.21:0,60,1592	0/0:25,1:25:22.26:0,22,1869	0/0:25,0:25:69.19:0,69,1768	0/0:19,0:19:54.18:0,54,1330	0/0:48,0:48:99:0,138,3613	0/0:15,0:15:42.14:0,42,1062	1/1:0,13:13:39.13:648,39,0	1/1:2,14:15:33.10:563,33,0	0/0:15,0:15:39.13:0,39,1028	0/0:21,0:21:60.20:0,60,1514	0/0:27,0:27:75.26:0,75,1939	0/0:4,0:4:12.04:0,12,320
chr10	35331908	.	GAGAGAA	G	222.03	PASS	AC=6;AF=0.111;AN=54;BaseQRankSum=3.248;DP=284;FS=2.062;HRun=0;HaplotypeScore=57.6988;InbreedingCoeff=0.7787;MQ=78.18;MQ0=0;MQRankSum=-2.699;QD=17.08;ReadPosRankSum=-1.786;VQSLOD=2.1902;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:19:41.84:0,42,1255	0/0:6,0:6:18.06:0,18,557	0/0:22,0:17:21.86:0,22,754	0/0:21,0:11:29.54:0,30,788	0/0:8,0:8:24.08:0,24,732	0/0:16,0:16:45.15:0,45,1363	0/0:12,0:12:29.94:0,30,905	0/0:11,0:12:33.11:0,33,1021	0/0:7,0:7:21.07:0,21,659	0/0:8,0:8:24.08:0,24,760	0/0:9,0:9:18.06:0,18,499	1/1:1,9:10:9.03:199,9,0	0/0:7,0:7:21.07:0,21,645	0/0:10,0:10:30.10:0,30,888	0/0:10,0:11:26.34:0,26,855	0/0:18,0:18:41.44:0,41,1307	0/0:19,0:19:47.85:0,48,1486	0/0:4,0:4:12.04:0,12,390	0/0:4,0:4:12.04:0,12,343	0/0:15,0:15:41.40:0,41,1256	0/0:7,0:7:18.06:0,18,566	0/0:4,0:4:9.03:0,9,280	1/1:1,0:1:3.01:67,3,0	1/1:0,2:2:3.01:69,3,0	0/0:7,0:7:21.03:0,21,558	0/0:12,0:13:30.10:0,30,938	0/0:11,0:11:24.05:0,24,742	./.
chr10	35333285	.	C	CAAAGTT	31499.30	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-6.482;DP=477;FS=2.236;HRun=0;HaplotypeScore=82.7337;InbreedingCoeff=0.9535;MQ=60.92;MQ0=0;MQRankSum=-12.397;QD=79.34;ReadPosRankSum=-0.423;VQSLOD=5.7310;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:13,10:24:45.15:1338,45,0	1/1:1,5:6:15.05:462,15,0	0/0:10,0:10:14.81:0,15,399	0/0:6,0:6:15.05:0,15,318	0/0:14,0:14:39.13:0,39,891	1/1:1,14:17:39.13:1327,39,0	1/1:5,7:12:24.08:804,24,0	1/1:29,26:56:99:4916,154,0	0/0:2,0:2:6.02:0,6,137	1/1:4,17:24:63.20:2026,63,0	1/1:6,11:17:51.17:1540,51,0	1/1:5,8:15:33.11:1011,33,0	1/1:0,12:14:36.12:1231,36,0	1/1:8,11:20:42.14:1366,42,0	1/1:4,20:27:72.25:2399,72,0	0/0:24,0:24:69.20:0,69,1409	0/0:24,0:24:60.21:0,60,1327	1/1:6,4:10:27.09:910,27,0	1/1:5,11:16:45.12:1376,45,0	1/1:1,19:20:57.20:1861,57,0	1/1:5,5:10:18.06:560,18,0	1/1:3,5:9:27.05:766,27,0	1/1:0,5:5:12.04:417,12,0	1/1:5,4:11:12.04:353,12,0	1/1:2,19:26:60.21:1996,60,0	1/1:3,17:21:60.19:1943,60,0	1/1:7,18:26:60.21:1984,60,0	1/1:1,9:10:27.09:913,27,0
chr10	35334119	.	A	AT	2012.32	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=-4.377;DP=493;FS=6.332;HRun=12;HaplotypeScore=60.0922;InbreedingCoeff=0.8859;MQ=68.23;MQ0=1;MQRankSum=2.996;QD=13.51;ReadPosRankSum=-0.259;VQSLOD=3.5989;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:3,0:34:59.07:0,59,171	0/0:7,0:7:11.92:0,12,88	0/0:11,0:9:0.64:0,1,72	0/1:8,0:7:0:0,0,0	1/1:4,15:19:33:311,33,0	0/0:15,0:18:38.85:0,39,258	0/0:18,0:19:39.81:0,40,270	0/0:27,0:32:59.27:0,59,397	1/1:3,17:20:51.08:496,51,0	0/0:12,0:14:30.88:0,31,208	0/0:10,0:10:29.80:0,30,215	1/1:1,1:8:20.52:116,21,0	0/0:9,0:9:23.45:0,23,175	0/0:19,0:18:32.05:0,32,239	0/0:16,0:18:34.70:0,35,239	1/1:9,15:25:3.42:388,3,0	1/1:5,26:31:19.28:511,19,0	0/0:22,1:25:35.02:0,35,400	0/0:14,0:17:35.07:0,35,217	0/0:14,0:17:29.69:0,30,192	0/0:18,0:19:40.72:0,41,290	0/0:10,0:10:20.82:0,21,153	1/1:5,0:12:17.38:99,17,0	1/1:4,0:26:50.46:278,50,0	0/0:13,0:15:27.90:0,28,187	0/0:15,0:17:36.86:0,37,252	0/0:18,1:20:14.56:0,15,261	0/0:12,0:12:26.81:0,27,197
chr10	35334365	.	C	CTTTGG	1466.27	PASS	AC=10;AF=0.217;AN=46;BaseQRankSum=-5.265;DP=614;FS=4.965;HRun=0;HaplotypeScore=116.9869;InbreedingCoeff=0.5991;MQ=65.37;MQ0=10;MQRankSum=0.539;QD=11.19;ReadPosRankSum=0.053;VQSLOD=2.1462;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:18:8.96:0,9,69	0/0:8,0:8:3.01:0,3,52	./.	./.	1/1:22,0:22:0.47:1,0,0	0/0:16,0:16:12.04:0,12,205	0/0:22,0:22:3.01:0,3,52	./.	1/1:24,0:24:12.04:295,12,0	0/0:37,0:37:12.04:0,12,195	0/0:11,0:11:3.01:0,3,52	0/0:10,0:13:5.22:0,5,32	0/0:16,0:16:12.04:0,12,206	0/0:20,0:30:23.88:0,24,246	0/0:23,0:23:27.08:0,27,437	1/1:22,10:32:21.07:572,21,0	1/1:24,9:34:27.09:726,27,0	0/0:30,0:29:27.07:0,27,409	0/0:24,0:21:3.01:0,3,52	0/0:23,0:23:12.04:0,12,202	0/0:7,0:7:6.02:0,6,103	./.	1/1:19,0:19:0.47:1,0,0	0/0:20,0:24:3.01:0,3,35	0/0:22,0:22:18.06:0,18,305	0/0:28,0:28:11.99:0,12,173	0/0:16,0:15:18.04:0,18,273	./.
chr10	35336282	.	C	CT	12127.26	PASS	AB=0.774;AC=52;AF=0.929;AN=56;BaseQRankSum=-5.720;DP=678;FS=0.000;HRun=11;HaplotypeScore=75.0939;InbreedingCoeff=0.2968;MQ=63.92;MQ0=2;MQRankSum=0.195;QD=18.21;ReadPosRankSum=1.973;VQSLOD=5.8081;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,33:40:71.97:711,72,0	1/1:4,9:13:24.05:244,24,0	0/1:20,0:12:18.88:19,0,42	0/0:11,0:7:2.87:0,3,65	1/1:13,11:25:18.54:341,19,0	1/1:4,18:24:27.54:432,28,0	1/1:4,17:22:41.92:410,42,0	1/1:12,16:29:7.26:386,7,0	1/1:0,10:10:24.05:244,24,0	1/1:6,26:32:60.11:599,60,0	1/1:9,14:23:33.45:310,33,0	1/1:7,18:26:23.92:455,24,0	1/1:2,22:24:48.94:479,49,0	1/1:12,11:23:18.66:331,19,0	1/1:6,24:30:42.89:612,43,0	1/1:6,21:29:56.74:545,57,0	1/1:5,18:23:57.10:573,57,0	1/1:3,18:21:24.86:433,25,0	1/1:6,22:27:63.11:632,63,0	1/1:7,21:29:19.74:506,20,0	1/1:3,13:16:36.07:365,36,0	1/1:3,26:30:65.85:622,66,0	1/1:2,21:23:28.33:465,28,0	1/1:1,18:19:45.09:457,45,0	1/1:4,22:26:36.88:555,37,0	1/1:9,26:35:51.83:679,52,0	1/1:7,20:28:10.35:455,10,0	0/1:3,14:17:10.40:269,0,10
chr10	35336412	.	CCCA	C	3520.90	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=7.547;DP=614;FS=3.492;HRun=0;HaplotypeScore=130.0972;InbreedingCoeff=0.9975;MQ=72.08;MQ0=0;MQRankSum=-0.943;QD=40.01;ReadPosRankSum=3.179;VQSLOD=4.7262;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:81.07:0,81,1659	0/0:10,0:10:30.08:0,30,617	0/0:20,0:18:54.03:0,54,986	0/0:18,0:18:47.95:0,48,907	1/1:2,23:24:54.18:913,54,0	0/0:25,0:25:69.22:0,69,1449	0/0:30,0:30:90.29:0,90,1830	0/0:23,0:23:63.18:0,63,1191	1/1:0,17:17:36.12:613,36,0	0/0:26,0:25:68.03:0,68,1404	0/0:12,0:12:36.09:0,36,722	0/0:25,0:25:69.23:0,69,1463	0/0:23,0:23:66.23:0,66,1433	0/0:25,0:25:72.23:0,72,1513	0/0:38,0:38:99:0,114,2438	1/1:2,26:27:71.90:1151,72,0	1/1:1,17:18:51.16:844,51,0	0/0:19,0:19:57.19:0,57,1187	0/0:22,0:22:57.19:0,57,1185	0/0:18,0:18:51.16:0,51,1067	0/0:29,0:29:81.26:0,81,1686	0/0:18,0:18:51.17:0,51,1035	0/0:23,0:23:69.10:0,69,1436	0/0:16,0:16:48.16:0,48,1034	0/0:22,0:22:66.23:0,66,1402	0/0:28,0:28:75.22:0,75,1450	0/0:22,0:22:57.17:0,57,1106	0/0:6,0:6:18.04:0,18,355
chr10	35336857	.	GA	G	4292.41	PASS	AB=0.701;AC=35;AF=0.625;AN=56;BaseQRankSum=-10.120;DP=599;FS=0.000;HRun=11;HaplotypeScore=83.9733;InbreedingCoeff=0.4911;MQ=51.49;MQ0=24;MQRankSum=5.606;QD=10.22;ReadPosRankSum=6.505;VQSLOD=3.9327;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,28:37:4.98:451,5,0	1/1:5,3:7:5.99:49,6,0	0/0:23,0:3:2.73:0,3,25	0/1:32,3:8:14.53:19,0,15	0/0:32,0:31:19.33:0,19,151	1/1:5,9:14:1.21:171,1,0	1/1:8,12:19:32.94:269,33,0	1/1:13,12:25:29.75:234,30,0	0/0:14,0:14:12.10:0,12,80	1/1:6,11:15:23.90:194,24,0	1/1:8,14:22:29.93:246,30,0	0/0:25,0:24:11.74:0,12,104	0/1:8,14:21:1.82:192,0,2	1/1:4,9:14:19.88:153,20,0	1/1:6,15:19:33.34:271,33,0	0/0:27,0:27:28.78:0,29,191	0/0:24,0:22:12.73:0,13,93	1/1:2,19:19:47.93:393,48,0	1/1:7,14:18:1.07:211,1,0	1/1:4,19:23:32.86:265,33,0	0/1:8,4:10:11.23:62,0,11	1/1:4,10:13:22.99:178,23,0	0/0:19,0:19:23.38:0,23,132	0/0:13,0:13:5.10:0,5,53	1/1:4,17:21:32.94:271,33,0	0/1:14,19:31:23.08:394,0,23	0/1:10,18:26:57.17:195,0,57	1/1:3,4:4:8.99:74,9,0
chr10	35336867	.	AAG	A	690.90	PASS	AB=0.953;AC=9;AF=0.161;AN=56;BaseQRankSum=4.068;DP=679;FS=0.951;HRun=0;HaplotypeScore=99.9999;InbreedingCoeff=-0.0087;MQ=55.77;MQ0=29;MQRankSum=-5.076;QD=3.11;ReadPosRankSum=-5.764;VQSLOD=0.2357;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:37:55.96:0,56,307	0/0:5,0:4:7.60:0,8,33	0/0:48,0:7:11.07:0,11,95	0/1:63,1:20:15.97:16,0,71	0/1:34,3:36:15.66:243,0,16	0/0:14,0:14:33.17:0,33,184	0/0:17,0:16:30.16:0,30,164	0/0:21,0:21:18.42:0,18,226	1/1:12,0:12:3.30:41,3,0	0/0:23,0:21:43.97:0,44,314	0/0:21,0:21:4.40:0,4,97	0/1:21,2:22:38.12:146,0,38	0/0:24,0:23:20.65:0,21,192	0/0:17,0:17:22.22:0,22,147	0/0:24,0:23:51.27:0,51,296	0/1:24,1:25:47.43:58,0,47	0/1:27,2:27:15.05:185,0,15	0/0:30,0:28:51.91:0,52,318	0/0:22,0:19:38.75:0,39,248	0/0:27,0:27:44.04:0,44,280	0/0:10,0:8:15.56:0,16,82	0/0:16,0:14:13.58:0,14,106	0/1:17,1:18:31.42:66,0,31	0/1:12,0:11:27.64:73,0,28	0/0:21,0:21:37.32:0,37,188	0/0:36,0:34:56.52:0,57,459	0/0:33,0:31:49.41:0,49,337	0/0:9,0:7:19.10:0,19,125
chr10	35336879	.	G	GGA	363.31	PASS	AB=0.740;AC=9;AF=0.161;AN=56;BaseQRankSum=9.016;DP=760;FS=24.758;HRun=0;HaplotypeScore=119.1529;InbreedingCoeff=-0.0735;MQ=59.29;MQ0=30;MQRankSum=-0.494;QD=1.10;ReadPosRankSum=-1.266;VQSLOD=0.0854;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:40:99:0,102,1480	0/0:5,0:5:13.86:0,14,188	0/1:71,0:11:2.80:3,0,211	0/1:96,0:29:34.71:35,0,306	0/1:12,0:36:31.81:32,0,106	0/0:17,0:17:51.07:0,51,783	0/0:18,0:18:48.07:0,48,713	0/0:26,0:26:72.14:0,72,1057	0/1:5,5:13:31.94:39,0,32	0/0:27,0:25:72.20:0,72,1106	0/0:18,0:18:51.05:0,51,723	0/1:15,0:23:60.94:109,0,61	0/0:24,0:23:57.06:0,57,773	0/0:20,0:20:51.08:0,51,715	0/0:24,0:23:59.89:0,60,849	0/1:20,0:29:42.37:81,0,42	0/1:6,0:23:25.92:26,0,46	0/0:30,0:29:81.28:0,81,1288	0/0:27,0:26:75.23:0,75,1149	0/0:27,0:27:54.65:0,55,1034	0/0:7,0:6:18.06:0,18,287	0/0:19,0:17:41.95:0,42,549	0/1:6,0:21:0.54:133,0,1	0/1:11,0:13:29.23:43,0,29	0/0:19,0:19:54.06:0,54,807	0/0:37,0:36:99:0,102,1426	0/0:32,0:30:66.09:0,66,949	0/0:9,0:7:21.07:0,21,338
chr10	35339591	.	T	TATGGGTCTG	15954.95	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-9.510;DP=779;FS=10.270;HRun=0;HaplotypeScore=202.8574;InbreedingCoeff=0.9993;MQ=78.94;MQ0=0;MQRankSum=-15.734;QD=77.83;ReadPosRankSum=1.873;VQSLOD=3.9751;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,135,3850	0/0:11,0:11:30.10:0,30,838	0/0:16,0:16:42.14:0,42,1206	0/0:28,0:28:66.20:0,66,1857	1/1:3,20:28:29.85:1109,30,0	0/0:19,0:19:48.15:0,48,1407	0/0:41,0:41:99:0,117,3319	0/0:33,0:33:87.28:0,87,2384	1/1:5,16:24:42.14:1995,42,0	0/0:24,0:24:72.24:0,72,2031	0/0:12,0:12:36.11:0,36,1026	1/1:9,33:45:95.91:4611,96,0	0/0:27,0:27:81.25:0,81,2207	0/0:35,0:35:99:0,102,2963	0/0:47,0:47:99:0,135,3890	1/1:2,26:34:66.23:3079,66,0	1/1:12,10:27:45.15:2039,45,0	0/0:31,0:31:87.27:0,87,2522	0/0:30,0:30:81.23:0,81,2145	0/0:20,0:20:60.21:0,60,1816	0/0:42,0:42:99:0,117,3532	0/0:16,0:16:48.16:0,48,1359	1/1:2,13:15:33.11:1523,33,0	1/1:5,21:30:33.11:1598,33,0	0/0:21,0:21:60.21:0,60,1662	0/0:35,0:35:99:0,99,2901	0/0:27,0:26:66.19:0,66,2000	0/0:10,0:10:24.08:0,24,688
chr10	35340066	.	T	TGGTGTGCATGTGC	22315.14	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=4.723;DP=944;FS=0.332;HRun=0;HaplotypeScore=356.4619;InbreedingCoeff=0.9794;MQ=61.28;MQ0=0;MQRankSum=-14.501;QD=96.60;ReadPosRankSum=-0.807;VQSLOD=3.5445;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,114,3733	0/0:13,0:13:24.08:0,24,764	0/0:29,0:25:21.67:0,22,1204	0/0:28,0:27:42.02:0,42,1049	1/1:10,7:16:32.95:2031,33,0	0/0:28,0:28:5.93:0,6,2361	0/0:34,0:34:72.20:0,72,2111	0/0:55,0:55:99:0,102,2731	1/1:24,10:34:72.23:3798,72,0	0/0:29,0:29:75.25:0,75,2696	0/0:21,0:21:51.15:0,51,1521	1/1:35,17:52:99:6149,111,0	0/0:28,0:28:66.23:0,66,2269	0/0:37,0:37:72.13:0,72,2271	0/0:49,0:49:99:0,114,3760	1/1:39,12:51:99:5570,120,0	1/1:23,3:26:42.12:1362,42,0	0/0:22,0:22:60.14:0,60,1935	0/0:31,0:31:45.11:0,45,1069	0/0:31,0:31:81.14:0,81,2436	0/0:102,0:102:99:0,253,7522	0/0:20,0:20:42.11:0,42,1258	1/1:8,5:13:23.90:1034,24,0	1/1:32,6:38:51.11:2372,51,0	0/0:24,0:24:60.16:0,60,1840	0/0:39,0:39:90.28:0,90,2853	0/0:27,0:26:63.18:0,63,1905	0/0:16,0:16:45.11:0,45,1362
chr10	35340111	.	G	GT	9517.32	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=18.393;DP=1031;FS=0.918;HRun=1;HaplotypeScore=172.3498;InbreedingCoeff=0.9999;MQ=62.50;MQ0=2;MQRankSum=-9.887;QD=38.85;ReadPosRankSum=0.546;VQSLOD=4.3797;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,159,2206	0/0:15,0:15:42.14:0,42,585	0/0:45,0:39:99:0,108,1401	0/0:53,0:45:99:0,102,1526	1/1:1,25:25:48.36:737,48,0	0/0:29,0:29:84.25:0,84,1150	0/0:44,0:44:99:0,123,1741	0/0:42,0:42:99:0,123,1689	1/1:2,29:31:90.78:1430,91,0	0/0:38,0:38:99:0,111,1516	0/0:12,0:12:36.12:0,36,502	1/1:3,50:53:99:2256,144,0	0/0:31,0:31:90.30:0,90,1253	0/0:39,0:39:99:0,114,1555	0/0:53,0:54:99:0,147,2076	1/1:1,48:49:99:2155,135,0	1/1:3,23:26:35.66:883,36,0	0/0:28,0:27:81.25:0,81,1113	0/0:23,0:23:66.20:0,66,889	0/0:30,0:30:87.28:0,87,1200	0/0:111,0:111:99:0,322,4434	0/0:19,0:19:57.19:0,57,796	1/1:1,17:18:43.03:673,43,0	1/1:4,38:42:92.96:1383,93,0	0/0:35,0:35:99:0,99,1380	0/0:36,0:36:99:0,108,1481	0/0:25,0:24:75.25:0,75,1043	0/0:23,0:23:69.23:0,69,965
chr10	35340869	.	A	ACGCGCGCGCG	9438.92	PASS	AB=0.829;AC=38;AF=0.679;AN=56;BaseQRankSum=-3.105;DP=563;FS=2.488;HRun=0;HaplotypeScore=198.4817;InbreedingCoeff=0.1683;MQ=64.26;MQ0=3;MQRankSum=-3.476;QD=18.92;ReadPosRankSum=-2.419;VQSLOD=3.3569;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:30:5.32:83,5,0	1/1:7,6:15:6.02:274,6,0	0/0:14,0:9:0.89:0,1,2	0/0:14,0:10:1.47:0,1,20	0/1:18,0:18:4.97:5,0,86	1/1:9,9:23:6.18:262,6,0	1/1:11,8:20:3.78:144,4,0	1/1:24,0:24:30.89:493,31,0	0/1:9,0:12:2.72:63,0,3	1/1:15,7:27:51.15:1498,51,0	0/1:8,3:15:0:1,0,0	0/1:22,0:27:54.33:157,0,54	1/1:7,7:15:12.04:501,12,0	1/1:8,6:18:3.01:152,3,0	0/0:8,4:13:0.29:0,0,0	0/1:18,0:18:12.14:16,0,12	1/1:9,0:11:17.70:286,18,0	1/1:11,16:30:39.13:1654,39,0	1/1:7,9:18:35.29:1177,35,0	0/1:12,8:23:0.34:1,0,0	0/0:13,6:22:0.47:0,0,1	0/1:15,7:23:0.07:0,0,0	0/1:20,0:23:18.14:18,0,20	0/1:17,0:17:5.80:11,0,6	0/1:17,16:35:0.17:1,0,0	1/1:14,15:33:66.14:1875,66,0	1/1:6,4:11:6.02:190,6,0	1/1:7,5:12:12.03:577,12,0
chr10	35340904	.	G	GAGAC	174.20	PASS	AB=0.594;AC=10;AF=0.179;AN=56;BaseQRankSum=4.688;DP=630;FS=7.048;HRun=0;HaplotypeScore=173.1700;InbreedingCoeff=0.5741;MQ=47.56;MQ0=15;MQRankSum=-5.245;QD=1.03;ReadPosRankSum=-1.201;VQSLOD=2.0315;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:23,1:43:3.67:4,0,49	0/0:12,0:12:23.67:0,24,385	0/0:13,0:4:9.03:0,9,159	0/0:35,0:17:28.78:0,29,406	0/1:3,14:17:0.08:0,0,0	0/0:27,0:27:38.38:0,38,673	0/0:23,0:23:38.93:0,39,733	0/0:42,0:42:99:0,114,1956	1/1:4,8:11:2.46:34,2,0	0/0:33,0:33:76.32:0,76,1456	0/0:21,0:21:35.57:0,36,679	0/1:13,10:24:3.09:162,0,3	0/0:17,0:17:38.34:0,38,609	0/0:23,0:23:35.36:0,35,615	0/0:14,0:14:26.87:0,27,478	0/1:2,12:14:0.30:0,0,0	1/1:8,6:14:7.25:83,7,0	0/0:27,0:27:29.60:0,30,728	0/0:22,0:16:38.16:0,38,535	0/0:21,0:21:24.24:0,24,506	0/0:35,0:34:75.24:0,75,1373	0/0:15,0:14:17.98:0,18,305	0/1:6,13:20:0.11:1,0,0	0/1:3,15:22:0:0,0,0	0/0:30,0:30:31.59:0,32,609	0/0:30,0:29:70.89:0,71,1231	0/0:10,0:10:24.08:0,24,437	0/0:11,0:11:29.10:0,29,454
chr10	35342154	.	GC	G	7164.40	PASS	AB=0.929;AC=17;AF=0.304;AN=56;BaseQRankSum=13.657;DP=682;FS=7.657;HRun=4;HaplotypeScore=71.1853;InbreedingCoeff=0.9464;MQ=79.82;MQ0=1;MQRankSum=-0.710;QD=30.36;ReadPosRankSum=3.087;VQSLOD=5.2490;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,36:39:96.29:1152,96,0	0/0:10,0:10:30.10:0,30,419	0/1:12,1:12:2.17:2,0,359	0/0:30,0:30:87.24:0,87,1149	1/1:0,21:21:63.19:756,63,0	0/0:25,0:25:72.24:0,72,1008	0/0:26,0:26:72.22:0,72,981	0/0:35,0:35:99:0,99,1387	1/1:0,22:22:60.17:720,60,0	0/0:16,0:16:45.15:0,45,630	0/0:11,0:11:33.11:0,33,458	1/1:1,44:45:99:1440,120,0	0/0:29,0:29:84.27:0,84,1145	0/0:28,0:28:84.28:0,84,1174	0/0:37,0:37:99:0,108,1510	1/1:1,32:33:87.05:1044,87,0	1/1:1,30:31:81.25:972,81,0	0/0:25,0:25:72.14:0,72,946	0/0:11,0:11:27.09:0,27,374	0/0:15,0:15:42.14:0,42,587	0/0:45,0:44:99:0,123,1703	0/0:15,0:15:45.15:0,45,630	1/1:0,10:10:30.09:360,30,0	1/1:1,21:22:60.18:720,60,0	0/0:30,0:30:84.28:0,84,1173	0/0:22,0:22:63.21:0,63,881	0/0:24,0:24:69.23:0,69,965	0/0:12,0:12:36.11:0,36,486
chr10	35343214	.	TTGGTTCCTGCCTGC	T	2207.60	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.124;DP=771;FS=0.000;HRun=0;HaplotypeScore=286.2169;InbreedingCoeff=0.9986;MQ=74.29;MQ0=0;MQRankSum=-7.313;QD=78.84;ReadPosRankSum=1.115;VQSLOD=2.8246;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,20:28:57.20:2302,57,0	0/0:12,0:12:30.10:0,30,1985	0/0:36,0:36:81.28:0,81,3738	0/0:28,0:28:63.18:0,63,3154	0/0:18,0:18:48.16:0,48,2714	0/0:31,0:31:78.27:0,78,4570	0/0:26,0:26:69.24:0,69,4184	0/0:42,0:42:99:0,105,5903	0/0:31,0:31:78.25:0,78,4358	0/0:28,0:28:75.26:0,75,4920	0/0:14,0:14:39.13:0,39,2492	0/0:36,0:36:99:0,102,6250	0/0:30,0:30:84.25:0,84,5123	0/0:23,0:23:60.19:0,60,3713	0/0:40,0:40:99:0,105,6642	0/0:39,0:39:87.28:0,87,5160	0/0:34,0:34:78.25:0,78,4762	0/0:25,0:25:63.22:0,63,3963	0/0:23,0:23:45.15:0,45,2496	0/0:24,0:24:60.21:0,60,3387	0/0:46,0:46:99:0,123,7373	0/0:15,0:15:30.10:0,30,2056	0/0:23,0:23:54.17:0,54,2839	0/0:35,0:35:81.23:0,81,4960	0/0:26,0:26:69.24:0,69,4292	0/0:22,0:22:54.17:0,54,3349	0/0:22,0:22:54.19:0,54,3512	0/0:14,0:14:33.11:0,33,1881
chr10	35345977	.	TA	T	3986.48	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=14.314;DP=620;FS=3.042;HRun=8;HaplotypeScore=55.9770;InbreedingCoeff=0.8923;MQ=70.45;MQ0=0;MQRankSum=-0.522;QD=22.65;ReadPosRankSum=3.190;VQSLOD=4.2351;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:81.25:0,81,979	0/0:9,0:9:27.08:0,27,326	0/0:4,0:5:6.01:0,6,62	0/1:10,0:10:4.67:5,0,108	1/1:1,23:24:63.06:600,63,0	0/0:25,0:25:72.19:0,72,838	0/0:19,0:19:54.15:0,54,640	0/0:31,0:31:72.22:0,72,869	1/1:1,15:16:42.06:406,42,0	0/0:28,0:28:81.24:0,81,969	0/0:25,0:25:66.10:0,66,765	1/1:5,29:34:75.11:724,75,0	0/0:27,0:27:72.21:0,72,858	0/0:24,0:24:63.19:0,63,761	0/0:30,0:30:87.24:0,87,1029	1/1:1,24:25:69.11:666,69,0	1/1:2,27:29:75.11:724,75,0	0/0:13,0:13:39.12:0,39,471	0/0:15,0:15:45.12:0,45,523	0/0:32,1:33:67.31:0,67,1083	0/0:15,0:15:45.14:0,45,544	0/0:24,0:24:69.20:0,69,824	1/1:4,19:23:54.08:521,54,0	1/1:1,14:15:5.83:340,6,0	0/0:23,0:23:66.17:0,66,773	0/0:28,0:28:78.23:0,78,933	0/0:35,0:35:99:0,99,1185	0/0:7,0:6:18.06:0,18,217
chr10	35346394	.	C	CG	6651.96	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=17.460;DP=665;FS=2.334;HRun=0;HaplotypeScore=85.9745;InbreedingCoeff=0.9995;MQ=73.56;MQ0=0;MQRankSum=-0.455;QD=35.01;ReadPosRankSum=3.687;VQSLOD=4.5765;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,117,1530	0/0:9,0:9:27.08:0,27,360	0/0:9,0:9:26.76:0,27,300	0/0:13,0:13:30.44:0,30,307	1/1:2,21:23:63.21:877,63,0	0/0:19,0:19:54.13:0,54,686	0/0:24,0:24:72.16:0,72,948	0/0:25,0:25:72.23:0,72,977	1/1:0,24:24:51.17:712,51,0	0/0:23,0:23:66.21:0,66,900	0/0:19,0:19:57.18:0,57,777	1/1:0,32:32:75.24:1024,75,0	0/0:23,0:23:69.20:0,69,913	0/0:32,0:32:93.23:0,93,1223	0/0:30,0:30:87.28:0,87,1189	1/1:0,27:27:69.23:955,69,0	1/1:0,39:39:99:1363,99,0	0/0:26,1:27:34.96:0,35,926	0/0:24,0:24:69.20:0,69,903	0/0:23,0:23:66.22:0,66,915	0/0:19,0:19:57.14:0,57,727	0/0:26,0:26:78.24:0,78,1055	1/1:1,14:15:42.02:528,42,0	1/1:0,30:30:87.29:1193,87,0	0/0:24,0:23:72.22:0,72,984	0/0:23,0:23:69.23:0,69,963	0/0:24,0:24:69.20:0,69,919	0/0:19,0:19:51.11:0,51,652
chr10	35348133	.	T	TC	30921.43	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-8.509;DP=825;FS=1.105;HRun=1;HaplotypeScore=77.7888;InbreedingCoeff=0.9976;MQ=87.42;MQ0=0;MQRankSum=-12.040;QD=40.16;ReadPosRankSum=6.818;VQSLOD=4.6837;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,47:49:99:1933,129,0	1/1:0,12:12:33.11:495,33,0	0/0:33,0:33:93.04:0,93,1133	0/0:22,0:22:62.55:0,63,753	1/1:2,31:33:87.18:1276,87,0	1/1:0,21:21:60.20:899,60,0	1/1:4,33:37:93.32:1394,93,0	1/1:0,30:30:87.17:1191,87,0	1/1:4,33:37:93.30:1373,93,0	1/1:0,27:27:81.27:1213,81,0	1/1:0,17:17:51.10:737,51,0	1/1:0,40:40:99:1528,102,0	1/1:1,39:40:99:1707,114,0	1/1:2,33:35:90.30:1346,90,0	1/1:3,49:52:99:1977,132,0	1/1:2,46:48:99:1887,126,0	1/1:0,22:22:63.21:944,63,0	1/1:0,12:12:33.08:470,33,0	1/1:3,22:25:69.20:989,69,0	1/1:1,27:28:84.24:1229,84,0	1/1:1,33:34:93.32:1394,93,0	1/1:0,19:19:54.18:809,54,0	1/1:0,27:27:75.25:1124,75,0	1/1:2,39:41:99:1529,102,0	1/1:0,24:24:72.24:1079,72,0	1/1:1,17:18:51.15:724,51,0	1/1:0,32:32:93.15:1362,93,0	1/1:1,9:10:21.07:315,21,0
chr10	35352055	.	GGCAA	G	8201.44	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-13.836;DP=657;FS=0.354;HRun=0;HaplotypeScore=152.1693;InbreedingCoeff=0.9984;MQ=83.26;MQ0=0;MQRankSum=-4.380;QD=52.24;ReadPosRankSum=2.570;VQSLOD=5.9664;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:90.27:0,90,1627	0/0:16,0:16:48.16:0,48,875	0/0:22,0:22:66.23:0,66,1779	0/0:19,0:19:57.12:0,57,1264	1/1:0,26:26:69.24:1424,69,0	0/0:22,0:22:66.21:0,66,1202	0/0:21,0:21:63.20:0,63,1116	0/0:25,0:25:75.23:0,75,1289	1/1:0,15:15:36.12:753,36,0	0/0:30,0:30:90.30:0,90,1560	0/0:25,0:25:75.24:0,75,1389	1/1:0,22:22:60.21:1252,60,0	0/0:23,0:23:69.21:0,69,1268	0/0:16,0:16:48.16:0,48,918	0/0:36,0:36:99:0,108,1934	1/1:0,28:28:69.24:1446,69,0	1/1:0,34:34:84.29:1758,84,0	0/0:27,0:27:81.26:0,81,1422	0/0:13,0:13:39.12:0,39,671	0/0:26,0:26:72.22:0,72,1286	0/0:15,0:15:45.14:0,45,814	0/0:28,0:28:84.29:0,84,1563	1/1:0,23:23:57.20:1191,57,0	1/1:0,9:9:18.06:377,18,0	0/0:25,0:25:75.16:0,75,1296	0/0:29,0:29:87.30:0,87,1532	0/0:40,0:40:99:0,120,2228	0/0:11,0:11:33.11:0,33,628
chr10	35355269	.	CTTAG	C	19288.13	PASS	AB=0.559;AC=35;AF=0.625;AN=56;BaseQRankSum=14.065;DP=610;FS=2.770;HRun=0;HaplotypeScore=111.2049;InbreedingCoeff=0.9085;MQ=82.75;MQ0=0;MQRankSum=-7.061;QD=47.63;ReadPosRankSum=1.303;VQSLOD=5.8024;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:42.14:0,42,1133	1/1:1,10:11:24.08:455,24,0	0/0:27,0:27:69.18:0,69,1571	0/0:13,0:13:29.89:0,30,661	0/0:34,0:34:99:0,99,2654	1/1:0,28:28:75.26:1423,75,0	1/1:1,16:17:42.14:797,42,0	1/1:4,30:34:90.28:1626,90,0	0/0:16,0:16:45.15:0,45,1137	1/1:3,21:24:63.19:1151,63,0	1/1:2,26:28:75.21:1300,75,0	0/0:24,0:24:72.25:0,72,1900	1/1:0,14:14:33.11:626,33,0	1/1:0,22:22:60.21:1138,60,0	1/1:0,27:27:72.25:1361,72,0	0/0:26,0:26:75.26:0,75,2012	0/0:14,0:14:42.14:0,42,1133	1/1:2,4:6:6.02:104,6,0	1/1:3,12:15:36.12:683,36,0	1/1:2,28:30:84.29:1569,84,0	1/1:4,24:28:57.20:1081,57,0	1/1:2,17:19:48.16:885,48,0	0/0:14,0:14:39.12:0,39,995	0/0:21,0:21:60.21:0,60,1613	1/1:1,20:21:51.17:961,51,0	1/1:1,23:24:69.22:1276,69,0	1/1:2,36:38:99:2048,108,0	0/1:4,15:18:34.18:803,0,34
chr10	35355682	.	C	CAT	2443.25	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=6.519;DP=690;FS=6.487;HRun=0;HaplotypeScore=133.0666;InbreedingCoeff=0.8840;MQ=60.45;MQ0=2;MQRankSum=-6.767;QD=23.72;ReadPosRankSum=-1.633;VQSLOD=3.8304;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:51.10:0,51,639	0/0:14,0:14:42.12:0,42,543	0/0:6,0:6:6.41:0,6,57	0/0:8,0:6:2.99:0,3,23	1/1:8,22:30:24.01:407,24,0	0/0:36,0:36:93.29:0,93,1219	0/0:11,0:11:30.10:0,30,399	0/0:43,0:43:96.31:0,96,1265	1/1:6,19:25:45.12:712,45,0	0/0:39,0:39:99:0,105,1367	0/0:28,0:28:75.25:0,75,998	0/0:35,0:35:90.28:0,90,1182	0/0:21,0:21:57.19:0,57,758	0/0:20,0:20:51.17:0,51,678	0/0:33,0:33:96.32:0,96,1277	1/1:5,38:43:84.26:1423,84,0	1/1:3,2:4:3.90:53,4,0	0/0:16,0:16:45.15:0,45,598	0/0:14,0:13:33.10:0,33,425	0/0:34,0:34:90.28:0,90,1180	0/0:32,0:32:78.15:0,78,1036	0/0:16,0:16:48.16:0,48,638	0/0:25,0:25:72.22:0,72,942	0/0:14,0:14:36.08:0,36,459	0/0:28,0:28:78.21:0,78,992	0/0:36,0:36:99:0,105,1378	0/0:41,0:41:96.27:0,96,1244	0/0:18,0:18:42.11:0,42,541
chr10	35355699	.	AC	A	5049.39	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=12.867;DP=639;FS=2.179;HRun=1;HaplotypeScore=109.7902;InbreedingCoeff=0.9228;MQ=60.46;MQ0=2;MQRankSum=-5.392;QD=29.53;ReadPosRankSum=-4.202;VQSLOD=3.5321;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:51.17:0,51,815	0/0:15,0:15:45.15:0,45,719	0/0:2,0:2:5.22:0,5,32	0/0:5,0:4:8.41:0,8,99	1/1:0,32:32:41.06:499,41,0	0/0:25,0:25:75.26:0,75,1199	0/0:11,0:11:33.11:0,33,528	0/0:43,0:43:99:0,129,2018	1/1:0,19:19:44.99:542,45,0	0/0:38,0:38:99:0,111,1743	0/0:29,0:29:84.25:0,84,1273	1/1:0,31:31:84.28:1174,84,0	0/0:19,0:19:54.18:0,54,863	0/0:18,0:18:54.17:0,54,840	0/0:35,0:35:99:0,102,1621	1/1:0,42:42:99:1229,102,0	1/1:2,3:4:0.90:54,1,0	0/0:16,0:16:45.15:0,45,719	0/0:11,0:10:30.06:0,30,411	0/0:32,0:32:92.97:0,93,1456	0/0:22,0:22:63.21:0,63,1007	0/0:15,0:15:45.14:0,45,696	1/1:0,28:28:74.86:1048,75,0	1/1:0,14:14:36.12:504,36,0	0/0:29,0:29:87.30:0,87,1391	0/0:35,0:35:99:0,105,1679	0/0:34,0:34:96.80:0,97,1536	0/0:17,0:17:51.17:0,51,815
chr10	35359703	.	TTGTGTG	T	22823.06	PASS	AB=0.639;AC=51;AF=0.911;AN=56;BaseQRankSum=-2.166;DP=747;FS=0.642;HRun=0;HaplotypeScore=189.5516;InbreedingCoeff=0.7111;MQ=54.65;MQ0=2;MQRankSum=-6.688;QD=33.42;ReadPosRankSum=3.869;VQSLOD=4.6381;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:17,22:39:39.75:675,0,40	1/1:1,6:7:9.03:163,9,0	0/0:35,0:28:36.82:0,37,1337	0/0:29,0:23:55.74:0,56,1493	1/1:3,25:28:57.11:929,57,0	1/1:5,21:26:48.13:927,48,0	1/1:10,22:32:57.19:1109,57,0	1/1:18,21:39:60.20:1236,60,0	1/1:2,23:26:56.90:1169,57,0	1/1:10,22:32:63.20:1318,63,0	1/1:4,10:14:27.05:467,27,0	1/1:8,26:34:69.19:1379,69,0	1/1:4,25:29:72.24:1435,72,0	1/1:10,21:32:58.44:1107,58,0	1/1:6,41:49:99:2294,112,0	1/1:13,25:39:72.20:1442,72,0	1/1:5,24:29:42.14:767,42,0	1/1:2,3:5:6.02:129,6,0	1/1:11,9:20:27.09:549,27,0	1/1:5,13:18:36.55:665,37,0	1/1:14,12:26:17.97:281,18,0	1/1:8,15:23:36.12:714,36,0	1/1:5,18:24:42.14:730,42,0	1/1:12,16:28:16.46:298,16,0	1/1:7,20:27:48.12:864,48,0	1/1:7,15:22:45.10:885,45,0	1/1:4,21:25:54.18:1039,54,0	1/1:6,4:10:12.04:253,12,0
chr10	35362068	.	C	CT	3136.79	PASS	AB=0.703;AC=29;AF=0.518;AN=56;BaseQRankSum=-6.491;DP=581;FS=2.062;HRun=13;HaplotypeScore=77.3935;InbreedingCoeff=0.1985;MQ=71.55;MQ0=0;MQRankSum=0.716;QD=7.71;ReadPosRankSum=-2.687;VQSLOD=2.2867;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:43.68:0,44,305	1/1:2,4:6:6:56,6,0	0/0:17,0:15:3.71:0,4,90	0/1:17,0:14:7.21:28,0,7	0/1:20,2:23:12.14:12,0,207	1/1:7,9:17:12.29:245,12,0	0/1:9,14:23:2.11:268,0,2	1/1:12,22:34:47.93:414,48,0	0/0:21,0:22:1.85:0,2,126	1/1:9,11:20:10.79:227,11,0	1/1:11,10:21:12.44:104,12,0	0/0:13,0:14:19.80:0,20,129	0/1:11,10:21:43.70:63,0,44	0/1:10,11:21:15.25:45,0,15	0/1:10,20:30:2.33:245,0,2	0/0:28,0:28:17:0,17,241	0/0:22,0:22:35.56:0,36,244	0/1:11,6:18:20.40:93,0,20	1/1:15,12:27:18.44:307,18,0	1/1:9,13:22:24.84:209,25,0	0/1:8,12:20:7.65:218,0,8	1/1:3,3:6:5.96:47,6,0	0/0:13,0:13:17.61:0,18,123	0/0:21,0:23:43.56:0,44,293	1/1:11,18:30:19.17:298,19,0	0/1:8,9:17:14.08:162,0,14	0/1:12,11:23:48.20:151,0,48	0/1:3,7:11:17.28:130,0,17
chr10	35366368	.	GA	G	12889.88	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-4.200;DP=575;FS=18.168;HRun=8;HaplotypeScore=78.4154;InbreedingCoeff=0.9929;MQ=62.36;MQ0=1;MQRankSum=-2.565;QD=23.78;ReadPosRankSum=3.888;VQSLOD=3.6883;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,28:30:71.98:695,72,0	1/1:0,10:10:30.05:289,30,0	0/0:18,0:14:41.80:0,42,439	0/0:14,0:11:18.03:0,18,194	1/1:2,26:28:78.12:752,78,0	1/1:1,21:22:51.08:493,51,0	1/1:1,17:18:48.07:460,48,0	1/1:3,29:32:81.11:776,81,0	1/1:4,16:20:45.07:434,45,0	1/1:3,16:19:48.06:458,48,0	1/1:0,12:12:33.05:318,33,0	1/1:2,15:17:45.07:434,45,0	1/1:2,18:20:36.05:348,36,0	1/1:1,13:14:36.06:348,36,0	1/1:3,24:27:63.10:608,63,0	1/1:5,31:36:78.12:753,78,0	1/1:0,24:24:63.10:608,63,0	1/1:2,19:21:54.09:521,54,0	1/1:2,17:19:48.06:457,48,0	1/1:1,17:18:51.08:492,51,0	1/1:6,17:23:51.08:493,51,0	1/1:2,7:9:21.03:203,21,0	1/1:0,14:14:39.06:377,39,0	1/1:3,26:29:63.10:608,63,0	1/1:1,21:22:51.08:492,51,0	1/1:2,27:29:78.11:748,78,0	1/1:0,14:13:33.05:319,33,0	1/1:0,15:15:42.07:406,42,0
chr10	35366562	.	T	TA	4829.36	PASS	AB=0.900;AC=47;AF=0.839;AN=56;BaseQRankSum=3.037;DP=469;FS=8.484;HRun=12;HaplotypeScore=67.6085;InbreedingCoeff=0.2369;MQ=44.30;MQ0=39;MQRankSum=-0.690;QD=11.36;ReadPosRankSum=-0.180;VQSLOD=3.8559;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:22:51.71:0,52,347	1/1:4,6:8:15.02:144,15,0	0/1:30,0:6:13.18:13,0,20	0/0:21,0:4:2.29:0,2,6	1/1:34,2:35:60.61:491,61,0	1/1:15,6:21:5.03:187,5,0	1/1:5,1:4:3:29,3,0	1/1:16,9:19:42.85:382,43,0	0/1:9,0:8:11.93:12,0,49	1/1:15,6:20:44.69:374,45,0	1/1:13,7:18:21.23:232,21,0	1/1:6,1:6:6.47:25,6,0	1/1:3,8:10:14.70:127,15,0	1/1:5,4:8:12.01:111,12,0	0/1:8,3:8:2.57:48,0,3	1/1:17,2:19:26.26:213,26,0	1/1:23,0:22:42.86:277,43,0	1/1:8,12:16:33.02:309,33,0	1/1:2,15:15:26.97:246,27,0	1/1:14,10:25:31.93:365,32,0	1/1:2,2:4:5.79:58,6,0	1/1:2,1:3:3:29,3,0	0/1:11,0:9:0.98:92,0,1	1/1:7,0:6:13.35:72,13,0	1/1:10,6:14:24.03:229,24,0	1/1:16,12:28:33.93:462,34,0	1/1:9,5:11:19.99:196,20,0	0/1:12,5:17:12.99:109,0,13
chr10	35366575	.	G	GA	4209.96	PASS	AB=0.817;AC=36;AF=0.643;AN=56;BaseQRankSum=-5.044;DP=502;FS=5.977;HRun=12;HaplotypeScore=75.0757;InbreedingCoeff=0.7282;MQ=53.88;MQ0=34;MQRankSum=-2.441;QD=13.89;ReadPosRankSum=-0.640;VQSLOD=3.8189;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,1:28:30.02:0,30,392	1/1:5,4:8:15.33:135,15,0	0/0:49,0:13:2.44:0,2,80	0/0:25,0:5:2.01:0,2,17	0/0:36,0:36:62.61:0,63,242	1/1:5,12:22:23.71:205,24,0	1/1:1,5:6:6:54,6,0	1/1:14,14:26:37.82:468,38,0	0/0:6,0:6:6.66:0,7,22	1/1:8,11:20:40.42:359,40,0	0/1:8,10:17:2.12:232,0,2	0/0:8,0:7:10.18:0,10,54	1/1:6,5:11:13.84:126,14,0	1/1:7,3:9:15.99:119,16,0	1/1:7,8:12:5.37:85,5,0	0/0:16,0:17:37.52:0,38,177	0/0:20,0:19:29.33:0,29,151	1/1:7,12:16:29.85:283,30,0	1/1:11,5:14:17.94:160,18,0	1/1:7,18:25:44.98:483,45,0	1/1:2,3:5:11.76:91,12,0	1/1:0,4:4:6.01:59,6,0	0/1:9,0:7:8.75:9,0,19	0/0:6,0:6:9.59:0,10,48	1/1:8,8:14:17.04:286,17,0	1/1:6,19:30:66.96:644,67,0	1/1:5,8:11:24.04:236,24,0	1/1:9,11:20:16.95:177,17,0
chr10	35366839	.	TAA	T	3771.55	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=10.090;DP=585;FS=4.576;HRun=11;HaplotypeScore=74.8535;InbreedingCoeff=0.9978;MQ=70.88;MQ0=0;MQRankSum=-1.222;QD=26.37;ReadPosRankSum=4.259;VQSLOD=3.9592;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:57.19:0,57,877	0/0:9,0:9:21.05:0,21,299	0/0:21,0:21:40.32:0,40,546	0/0:11,0:11:27.05:0,27,371	1/1:3,24:29:65.49:662,65,0	0/0:18,0:19:50.66:0,51,748	0/0:16,0:20:43.60:0,44,562	0/0:39,0:41:99:0,105,1495	1/1:2,17:19:45.11:479,45,0	0/0:33,0:33:90.31:0,90,1372	0/0:7,0:9:24.01:0,24,284	1/1:1,24:25:72.18:766,72,0	0/0:22,0:22:63.20:0,63,947	0/0:20,0:20:42.14:0,42,647	0/0:35,0:35:87.28:0,87,1293	1/1:2,26:28:72.17:766,72,0	1/1:3,16:19:45.10:479,45,0	0/0:18,0:18:39.11:0,39,576	0/0:16,0:16:45.15:0,45,684	0/0:22,0:22:60.10:0,60,849	0/0:17,0:20:48.12:0,48,662	0/0:12,0:12:33.11:0,33,507	1/1:2,12:14:38.83:395,39,0	1/1:1,8:9:21.05:224,21,0	0/0:15,0:15:39.13:0,39,594	0/0:28,0:28:78.21:0,78,1144	0/0:31,0:32:95.79:0,96,1392	0/0:14,0:14:39.09:0,39,564
chr10	35368442	.	C	CTCCA	3531.30	PASS	AB=1.000;AC=38;AF=0.679;AN=56;BaseQRankSum=1.904;DP=444;FS=0.000;HRun=0;HaplotypeScore=91.8033;InbreedingCoeff=0.2539;MQ=64.86;MQ0=20;MQRankSum=-1.570;QD=11.04;ReadPosRankSum=1.022;VQSLOD=2.2342;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:20:20.14:0,20,224	0/1:7,0:7:5.01:59,0,5	0/0:38,0:16:40.66:0,41,627	0/0:46,0:20:50.04:0,50,725	1/1:13,0:13:20.74:174,21,0	0/1:15,0:14:39.75:40,0,71	1/1:20,0:20:23.79:174,24,0	1/1:12,0:10:6.07:33,6,0	1/1:8,0:8:9.03:165,9,0	0/1:14,0:13:3.47:112,0,3	1/1:6,0:6:4.36:31,4,0	1/1:11,4:17:10.86:168,11,0	1/1:10,0:10:9.92:154,10,0	1/1:15,0:15:9.03:198,9,0	1/1:19,0:19:21.75:363,22,0	0/1:9,0:9:11.13:114,0,11	0/1:36,0:35:1.21:437,0,1	0/1:14,0:14:19.81:41,0,20	1/1:9,0:9:9.68:121,10,0	1/1:8,0:7:14.81:142,15,0	0/1:17,0:16:1.89:20,0,2	0/0:8,0:8:0.66:0,1,3	0/0:11,0:11:0.47:0,0,1	1/1:17,0:17:14.69:308,15,0	1/1:12,0:12:5.99:78,6,0	0/1:18,0:18:32.61:126,0,33	1/1:11,0:10:11.74:202,12,0	1/1:11,0:11:15:273,15,0
chr10	35368443	.	T	TCCAC	7123.65	PASS	AB=0.788;AC=48;AF=0.857;AN=56;BaseQRankSum=-1.254;DP=520;FS=3.112;HRun=0;HaplotypeScore=113.3728;InbreedingCoeff=0.4856;MQ=61.86;MQ0=20;MQRankSum=-0.476;QD=16.76;ReadPosRankSum=1.600;VQSLOD=4.7873;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:26:56.36:56,0,90	1/1:8,0:9:16.82:170,17,0	0/0:38,0:16:40.27:0,40,389	0/0:46,0:20:50.19:0,50,438	1/1:1,12:16:20.81:219,21,0	1/1:17,0:15:4.58:234,5,0	1/1:20,0:22:47.28:488,47,0	1/1:16,0:13:35.81:293,36,0	1/1:1,7:9:9.03:234,9,0	1/1:19,0:18:44.36:501,44,0	1/1:8,0:9:9:103,9,0	1/1:20,0:19:28.79:372,29,0	1/1:3,0:15:11.93:226,12,0	1/1:0,14:17:9.03:250,9,0	1/1:6,10:21:23.77:479,24,0	1/1:1,8:10:8.25:187,8,0	1/1:6,31:41:10.45:641,10,0	0/1:4,0:15:10:85,0,10	1/1:13,0:15:28.97:384,29,0	1/1:7,1:16:14.47:176,14,0	1/1:21,0:19:30.10:234,30,0	1/1:8,0:10:5.89:46,6,0	0/0:0,11:11:0.47:0,0,1	1/1:0,16:18:14.69:430,15,0	1/1:3,0:14:6.02:127,6,0	1/1:19,0:19:26.79:507,27,0	1/1:3,1:13:14.96:319,15,0	1/1:2,0:12:15.05:362,15,0
chr10	35368492	.	A	ACC	5293.65	PASS	AB=1.000;AC=34;AF=0.607;AN=56;BaseQRankSum=4.207;DP=448;FS=1.447;HRun=0;HaplotypeScore=109.4417;InbreedingCoeff=0.7863;MQ=58.07;MQ0=6;MQRankSum=1.146;QD=18.01;ReadPosRankSum=-0.876;VQSLOD=4.9319;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:26:25.90:0,26,298	1/1:4,1:5:8.50:74,9,0	0/0:14,0:12:29.03:0,29,350	0/0:10,0:5:10.58:0,11,131	0/0:13,0:13:24.55:0,25,358	1/1:20,0:18:28.28:253,28,0	1/1:9,2:11:13.94:252,14,0	1/1:32,0:31:72.36:686,72,0	0/0:14,0:14:39.13:0,39,591	0/1:26,0:24:36.59:389,0,37	1/1:10,0:11:26.77:256,27,0	0/0:15,0:15:20.35:0,20,234	1/1:17,1:18:36.67:296,37,0	1/1:11,1:12:20.50:187,21,0	1/1:15,2:17:38.17:393,38,0	0/0:12,0:12:24.08:0,24,372	0/0:30,0:30:63.21:0,63,912	1/1:13,1:14:24.31:341,24,0	1/1:19,0:19:29.53:247,30,0	1/1:18,2:19:38.62:387,39,0	1/1:16,0:15:26.95:221,27,0	1/1:3,9:12:3.01:38,3,0	0/0:8,0:8:15.52:0,16,246	0/0:10,0:10:18.06:0,18,228	1/1:9,0:9:16.05:146,16,0	0/1:25,0:25:27.17:442,0,27	1/1:15,2:17:34.98:443,35,0	1/1:7,3:10:6.06:242,6,0
chr10	35369315	.	T	TGTCCGTCCGTCC	11783.54	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=3.321;DP=634;FS=0.879;HRun=0;HaplotypeScore=210.7258;InbreedingCoeff=0.9682;MQ=66.79;MQ0=1;MQRankSum=-12.810;QD=56.38;ReadPosRankSum=-3.974;VQSLOD=3.9117;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:93.32:0,93,2896	0/0:8,0:8:15.05:0,15,447	0/0:13,0:11:18.02:0,18,408	0/0:10,0:10:15.01:0,15,325	1/1:11,18:32:9.03:369,9,0	0/0:14,0:14:33.08:0,33,781	0/0:16,0:16:39.12:0,39,1071	0/0:19,0:19:39.12:0,39,949	1/1:13,13:27:24.04:974,24,0	0/0:34,0:34:72.25:0,72,2324	0/0:9,0:9:27.09:0,27,810	1/1:40,0:40:99:4043,108,0	0/0:22,0:22:54.17:0,54,1515	0/0:26,0:26:45.15:0,45,1468	0/0:30,0:30:66.20:0,66,2024	1/1:39,0:39:99:3658,102,0	1/1:10,11:23:10.91:879,11,0	0/0:6,0:6:15.05:0,15,439	0/0:13,0:13:39.13:0,39,1005	0/0:13,0:13:33.09:0,33,993	0/0:42,0:42:66.19:0,66,1826	0/0:21,0:21:51.16:0,51,1602	1/1:22,0:22:30.05:1266,30,0	1/1:10,12:26:15.05:595,15,0	0/0:20,0:20:45.13:0,45,1206	0/0:25,0:25:54.19:0,54,1831	0/0:21,0:21:41.52:0,42,1385	0/0:22,0:22:42.14:0,42,1138
chr10	35369329	.	T	TCCGTCCGT	5417.72	PASS	AB=0.966;AC=8;AF=0.143;AN=56;BaseQRankSum=3.915;DP=615;FS=10.225;HRun=0;HaplotypeScore=175.7848;InbreedingCoeff=-0.1819;MQ=59.82;MQ0=4;MQRankSum=-7.842;QD=24.29;ReadPosRankSum=4.492;VQSLOD=3.6372;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:94.53:0,95,2181	0/0:9,0:9:18.01:0,18,338	0/0:10,0:6:15.04:0,15,261	0/0:6,0:5:12.04:0,12,239	0/1:23,0:23:63.42:260,0,63	0/0:13,0:13:24.06:0,24,532	0/0:16,0:16:6.49:0,6,718	0/0:22,0:20:42.11:0,42,811	0/1:25,0:25:99:181,0,383	0/0:32,0:32:26.18:0,26,1721	0/0:11,0:11:24.08:0,24,592	0/1:47,0:47:99:1924,0,408	0/0:28,0:28:34.40:0,34,1064	0/0:21,0:21:45.14:0,45,1091	0/0:32,0:32:60.20:0,60,1476	0/1:39,0:39:99:1996,0,188	0/1:18,0:18:84.43:287,0,84	0/0:7,0:7:1.63:0,2,308	0/0:15,0:14:39.10:0,39,729	0/0:13,0:13:7.40:0,7,694	0/0:31,0:31:57.16:0,57,1265	0/0:22,0:22:47.68:0,48,1198	0/1:13,6:21:99:713,0,158	0/1:24,0:24:51.66:52,0,269	0/0:20,0:20:42.11:0,42,841	0/1:26,0:26:4.98:5,0,1346	0/0:21,0:21:38.34:0,38,1036	0/0:21,0:20:39.12:0,39,804
chr10	35369345	.	TCCTC	T	5183.30	PASS	AB=1.000;AC=37;AF=0.712;AN=52;BaseQRankSum=-13.599;DP=585;FS=14.254;HRun=0;HaplotypeScore=126.9842;InbreedingCoeff=0.8040;MQ=55.54;MQ0=6;MQRankSum=8.809;QD=13.82;ReadPosRankSum=2.770;VQSLOD=3.4509;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,31:45:33.11:540,33,0	1/1:4,3:7:2.94:49,3,0	./.	./.	0/0:26,0:26:13.87:0,14,234	1/1:4,6:10:6.02:98,6,0	1/1:17,0:17:39.01:395,39,0	1/1:16,5:19:11.85:83,12,0	0/0:27,0:27:57.02:0,57,787	1/1:10,18:28:51.07:649,51,0	1/1:2,9:11:23.21:194,23,0	0/0:48,0:48:99:0,120,1244	1/1:6,18:24:18.06:293,18,0	1/1:9,10:19:15.05:245,15,0	1/1:10,25:35:24.08:393,24,0	0/0:37,0:37:82.92:0,83,881	0/0:22,0:21:33.67:0,34,298	0/1:4,0:4:19.76:84,0,20	1/1:8,4:10:11.99:121,12,0	1/1:5,6:11:18.02:215,18,0	1/1:8,18:26:18.06:295,18,0	1/1:8,14:22:29.75:330,30,0	0/0:20,0:20:36.37:0,36,352	0/0:23,0:23:27.88:0,28,510	1/1:5,14:19:12.04:196,12,0	1/1:11,16:26:38.77:611,39,0	1/1:5,18:23:20.09:343,20,0	1/1:7,7:13:3.01:49,3,0
chr10	35372045	.	TG	T	7414.03	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=20.533;DP=875;FS=0.624;HRun=1;HaplotypeScore=147.6621;InbreedingCoeff=1.0000;MQ=86.05;MQ0=0;MQRankSum=-5.530;QD=38.22;ReadPosRankSum=4.675;VQSLOD=4.2976;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,153,2372	0/0:13,0:13:39.13:0,39,618	0/0:32,0:32:90.29:0,90,1353	0/0:25,1:26:57.18:0,57,997	1/1:0,30:30:78.26:1071,78,0	0/0:19,0:19:57.18:0,57,884	0/0:31,0:31:93.29:0,93,1440	0/0:46,0:46:99:0,135,2077	1/1:0,24:24:72.24:995,72,0	0/0:39,0:39:99:0,108,1706	0/0:20,0:20:60.20:0,60,959	1/1:0,31:31:87.29:1211,87,0	0/0:35,0:35:99:0,102,1578	0/0:39,0:39:99:0,117,1824	0/0:46,0:46:99:0,138,2178	1/1:0,24:24:69.22:948,69,0	1/1:0,27:27:75.25:1038,75,0	0/0:18,0:18:54.13:0,54,812	0/0:24,0:24:72.23:0,72,1108	0/0:33,0:33:93.29:0,93,1438	0/0:48,0:48:99:0,144,2223	0/0:34,0:34:99:0,102,1630	1/1:0,15:15:42.09:585,42,0	1/1:0,43:43:99:1566,114,0	0/0:27,0:27:81.28:0,81,1295	0/0:55,0:55:99:0,160,2542	0/0:25,0:24:75.24:0,75,1176	0/0:19,0:19:57.19:0,57,911
chr10	35372949	.	T	TTTTTTGG	7806.93	PASS	AB=0.964;AC=25;AF=0.446;AN=56;BaseQRankSum=-12.866;DP=713;FS=0.722;HRun=0;HaplotypeScore=173.9704;InbreedingCoeff=0.1054;MQ=62.21;MQ0=9;MQRankSum=-8.390;QD=15.68;ReadPosRankSum=-6.177;VQSLOD=2.2140;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:93.72:0,94,2086	0/1:21,0:21:26.69:27,0,675	0/0:24,0:18:27.96:0,28,416	0/0:24,0:14:21.10:0,21,303	1/1:7,19:26:36.03:1021,36,0	0/0:19,0:19:31.11:0,31,557	0/1:24,0:24:51.87:52,0,691	0/1:23,0:23:99:211,0,309	0/1:2,8:15:1.90:546,0,2	0/1:31,0:31:33.19:33,0,930	0/1:35,0:35:12.73:13,0,1085	1/1:3,25:30:42.06:1578,42,0	0/1:20,0:20:95.77:96,0,564	0/1:28,0:28:22.78:23,0,884	0/1:30,0:30:52.54:53,0,855	1/1:3,28:32:42.14:1572,42,0	1/1:3,20:23:14.95:319,15,0	0/1:35,0:33:99:217,0,770	0/0:23,0:22:13.19:0,13,701	0/0:29,0:29:32.60:0,33,1001	0/1:17,0:16:5.91:6,0,496	0/1:21,0:21:14.83:15,0,603	1/1:4,19:28:16.12:1263,16,0	1/1:2,16:19:21.07:763,21,0	0/0:22,0:21:18.21:0,18,748	0/0:23,0:23:38.21:0,38,900	0/1:34,0:34:1.01:1,0,1138	0/0:15,0:15:2.15:0,2,495
chr10	35373253	.	ATT	A	10980.37	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-0.525;DP=596;FS=28.471;HRun=13;HaplotypeScore=158.2689;InbreedingCoeff=0.9866;MQ=60.89;MQ0=0;MQRankSum=-5.515;QD=19.47;ReadPosRankSum=3.498;VQSLOD=1.7982;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,23:25:63.03:611,63,0	1/1:1,14:15:42.06:407,42,0	0/0:19,0:17:17.95:0,18,229	0/0:13,0:10:17.74:0,18,203	1/1:2,0:24:51.82:230,52,0	1/1:2,13:17:41.55:374,42,0	1/1:5,9:14:27.01:262,27,0	1/1:11,22:33:44.18:608,44,0	1/1:1,0:17:43.41:183,43,0	1/1:5,27:32:81.09:786,81,0	1/1:3,23:27:63:650,63,0	1/1:3,0:28:60.59:259,61,0	1/1:1,21:22:63.09:611,63,0	1/1:1,12:13:24.03:233,24,0	1/1:3,24:28:63.01:661,63,0	1/1:2,0:23:51.87:221,52,0	1/1:6,0:28:54.41:234,54,0	1/1:3,12:15:33.02:320,33,0	1/1:5,15:20:45.05:436,45,0	1/1:4,23:27:69.07:669,69,0	1/1:5,10:16:20.91:253,21,0	1/1:3,18:21:51.05:495,51,0	1/1:2,0:14:30.18:131,30,0	1/1:3,0:15:27.68:129,28,0	1/1:5,22:27:63.08:611,63,0	1/1:2,21:24:62.79:594,63,0	1/1:3,20:24:62.81:594,63,0	1/1:0,14:15:44.81:419,45,0
chr10	35373303	.	A	AAAT	31680.95	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=9.634;DP=618;FS=8.310;HRun=0;HaplotypeScore=247.2760;InbreedingCoeff=0.9974;MQ=77.81;MQ0=0;MQRankSum=-10.689;QD=55.19;ReadPosRankSum=4.536;VQSLOD=4.1870;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,18:23:56.91:1082,57,0	1/1:3,13:16:48.16:932,48,0	0/0:25,0:25:72.25:0,72,1226	0/0:19,0:19:51.16:0,51,801	1/1:3,32:35:99:1894,102,0	1/1:1,16:17:51.17:1041,51,0	1/1:4,8:12:33.11:608,33,0	1/1:14,21:35:99:2013,102,0	1/1:5,15:20:54.14:1047,54,0	1/1:6,23:29:81.28:1654,81,0	1/1:5,26:31:87.02:1665,87,0	1/1:6,18:24:69.24:1312,69,0	1/1:7,18:24:72.25:1340,72,0	1/1:0,17:17:51.17:981,51,0	1/1:8,23:31:93.32:1767,93,0	1/1:3,18:21:63.22:1199,63,0	1/1:3,16:19:54.19:1013,54,0	1/1:2,14:16:48.16:936,48,0	1/1:6,7:13:36.12:762,36,0	1/1:7,25:32:93.32:1785,93,0	1/1:2,7:9:27.09:520,27,0	1/1:4,17:21:60.21:1129,60,0	1/1:1,22:23:69.23:1273,69,0	1/1:3,8:11:21.54:371,22,0	1/1:6,21:27:78.25:1513,78,0	1/1:10,21:31:87.29:1716,87,0	1/1:4,18:22:66.23:1315,66,0	1/1:4,10:14:42.14:813,42,0
chr10	35373308	.	GGT	G	18893.24	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=10.211;DP=525;FS=5.934;HRun=0;HaplotypeScore=225.0052;InbreedingCoeff=0.9881;MQ=81.81;MQ0=2;MQRankSum=-10.623;QD=39.12;ReadPosRankSum=6.827;VQSLOD=4.5946;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:1,19:20:48.14:652,48,0	1/1:1,13:14:42.14:569,42,0	0/0:25,0:25:75.22:0,75,1376	0/0:17,0:17:48.14:0,48,893	1/1:3,32:35:99:1452,105,0	1/1:2,16:18:54.18:758,54,0	1/1:1,8:9:24.07:289,24,0	1/1:0,21:21:63.20:840,63,0	1/1:0,16:16:48.15:630,48,0	1/1:1,23:24:72.24:1032,72,0	1/1:2,27:29:83.25:1080,83,0	1/1:0,18:18:54.16:699,54,0	1/1:0,19:18:54.17:714,54,0	1/1:1,17:18:53.75:713,54,0	1/1:1,26:26:78.25:1096,78,0	1/1:1,18:19:57.18:747,57,0	1/1:2,16:18:45.61:569,46,0	1/1:1,14:15:42.14:622,42,0	1/1:3,8:10:27.09:395,27,0	1/1:0,26:26:78.25:1072,78,0	1/1:0,7:7:21.07:290,21,0	1/1:0,17:17:51.14:643,51,0	1/1:0,22:22:66.21:859,66,0	1/1:0,8:8:15.04:168,15,0	1/1:0,21:21:63.20:878,63,0	1/1:0,21:21:63.21:888,63,0	1/1:1,18:19:57.18:788,57,0	1/1:0,11:11:33.11:449,33,0
chr10	35373944	.	GT	G	13941.78	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=1.800;DP=602;FS=20.731;HRun=7;HaplotypeScore=104.6162;InbreedingCoeff=0.9562;MQ=69.94;MQ0=0;MQRankSum=-7.736;QD=24.94;ReadPosRankSum=4.708;VQSLOD=3.4300;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:11,28:39:43.37:730,43,0	1/1:1,6:7:21.05:214,21,0	0/0:26,0:26:69.08:0,69,825	0/0:17,0:17:13.37:0,13,358	1/1:3,20:23:60.13:606,60,0	1/1:2,30:32:75.17:764,75,0	1/1:3,19:22:59.99:585,60,0	1/1:12,19:31:66.13:668,66,0	1/1:2,23:25:72.16:734,72,0	1/1:3,29:32:83.93:848,84,0	1/1:1,16:17:48.09:481,48,0	1/1:3,20:23:57.12:579,57,0	1/1:1,21:22:66.15:672,66,0	1/1:3,15:18:48.11:487,48,0	1/1:3,14:17:36.08:367,36,0	1/1:0,18:18:48.11:489,48,0	1/1:7,22:28:59.75:611,60,0	1/1:2,14:16:30.07:306,30,0	1/1:2,23:25:69.14:692,69,0	1/1:0,22:22:63.06:620,63,0	1/1:6,23:29:47.79:487,48,0	1/1:2,17:19:48.10:487,48,0	1/1:0,11:11:33.08:336,33,0	1/1:1,12:13:32.99:322,33,0	1/1:2,13:15:36.08:367,36,0	1/1:1,18:19:54.10:538,54,0	1/1:6,26:32:84.19:856,84,0	1/1:0,3:3:9.02:92,9,0
chr10	35374490	.	ATAGC	A	19932.79	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=15.057;DP=632;FS=4.259;HRun=0;HaplotypeScore=114.5198;InbreedingCoeff=0.9968;MQ=72.62;MQ0=0;MQRankSum=-4.113;QD=46.90;ReadPosRankSum=0.349;VQSLOD=5.3642;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:51.16:0,51,1321	1/1:0,8:8:21.07:399,21,0	0/0:14,0:14:33.10:0,33,803	0/0:9,0:9:20.55:0,21,353	0/0:42,0:42:99:0,123,3253	1/1:3,25:28:66.23:1238,66,0	1/1:1,15:16:42.14:797,42,0	1/1:5,34:39:99:1839,102,0	0/0:19,0:19:57.20:0,57,1507	1/1:3,32:35:96.33:1807,96,0	1/1:2,16:18:33.11:606,33,0	0/0:20,0:20:60.21:0,60,1619	1/1:2,20:22:51.17:968,51,0	1/1:1,25:26:63.22:1161,63,0	1/1:1,28:29:78.27:1481,78,0	0/0:31,0:31:87.30:0,87,2349	0/0:23,0:23:66.17:0,66,1720	1/1:1,9:10:24.08:456,24,0	1/1:3,19:22:54.17:981,54,0	1/1:5,30:35:87.30:1581,87,0	1/1:2,9:11:24.08:456,24,0	1/1:0,29:29:81.23:1462,81,0	0/0:18,0:18:51.18:0,51,1376	0/0:13,0:13:39.13:0,39,1053	1/1:1,29:30:81.28:1538,81,0	1/1:1,21:22:63.18:1129,63,0	1/1:2,32:34:90.31:1694,90,0	1/1:0,11:11:18.06:342,18,0
chr10	35375366	.	TA	T	4575.05	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=12.026;DP=548;FS=5.217;HRun=3;HaplotypeScore=50.4958;InbreedingCoeff=0.9990;MQ=78.46;MQ0=0;MQRankSum=-1.985;QD=33.39;ReadPosRankSum=3.765;VQSLOD=5.2093;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:27.07:0,27,369	0/0:9,0:9:24.08:0,24,342	0/0:13,0:13:38.99:0,39,522	0/0:16,0:15:39.08:0,39,463	1/1:0,15:15:45.14:558,45,0	0/0:18,0:18:54.16:0,54,758	0/0:13,0:13:36.12:0,36,518	0/0:28,0:28:78.26:0,78,1120	1/1:0,24:24:51.16:632,51,0	0/0:30,0:30:84.28:0,84,1195	0/0:22,0:22:66.20:0,66,931	1/1:0,29:29:84.26:1041,84,0	0/0:20,0:20:60.20:0,60,864	0/0:21,0:21:63.21:0,63,907	0/0:23,0:23:69.23:0,69,994	1/1:0,21:21:63.20:781,63,0	1/1:1,14:15:36.11:446,36,0	0/0:13,0:13:36.08:0,36,495	0/0:20,0:20:57.19:0,57,821	0/0:21,0:21:63.21:0,63,902	0/0:21,0:21:63.21:0,63,906	0/0:9,0:9:27.09:0,27,385	1/1:0,17:17:48.15:595,48,0	1/1:0,16:16:42.13:521,42,0	0/0:25,0:25:75.22:0,75,1028	0/0:18,0:18:48.15:0,48,673	0/0:49,0:48:99:0,141,2002	0/0:10,0:10:27.09:0,27,389
chr10	35375963	.	ATT	A	7163.89	PASS	AB=0.593;AC=46;AF=0.821;AN=56;BaseQRankSum=-8.813;DP=534;FS=9.588;HRun=14;HaplotypeScore=72.8453;InbreedingCoeff=0.6047;MQ=72.75;MQ0=7;MQRankSum=-1.461;QD=16.36;ReadPosRankSum=2.521;VQSLOD=3.4487;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,26:36:82.68:686,83,0	1/1:2,3:5:2.97:75,3,0	0/0:33,0:19:32.64:0,33,281	0/0:17,0:8:5.98:0,6,49	0/0:6,2:31:3.43:0,3,202	1/1:2,18:20:39.02:361,39,0	1/1:3,14:18:35.77:317,36,0	1/1:10,19:30:38.18:440,38,0	0/1:5,1:16:6.83:7,0,50	1/1:6,16:22:35.68:397,36,0	1/1:1,18:19:54.04:499,54,0	1/1:1,14:15:36.03:333,36,0	1/1:3,12:15:29.98:278,30,0	1/1:3,16:19:26.60:281,27,0	1/1:1,14:16:29.98:277,30,0	0/0:3,1:13:1.77:0,2,141	0/1:6,2:19:15.20:15,0,119	1/1:7,21:28:53.80:485,54,0	1/1:6,18:24:50.94:465,51,0	1/1:1,14:16:37.60:327,38,0	1/1:5,9:14:20.96:194,21,0	1/1:3,6:10:11.86:158,12,0	1/1:3,8:11:15.18:124,15,0	1/1:4,15:19:42.03:387,42,0	1/1:4,7:10:14.97:132,15,0	1/1:6,15:23:35.22:352,35,0	1/1:3,9:12:27.02:250,27,0	1/1:4,12:17:29.84:324,30,0
chr10	35377632	.	GCCCCT	G	5316.31	PASS	AB=0.524;AC=13;AF=0.232;AN=56;BaseQRankSum=11.248;DP=591;FS=6.098;HRun=0;HaplotypeScore=118.7599;InbreedingCoeff=0.8935;MQ=70.66;MQ0=1;MQRankSum=-0.840;QD=39.38;ReadPosRankSum=5.016;VQSLOD=4.3401;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:63.21:0,63,1752	0/0:8,0:8:15.05:0,15,437	0/0:20,0:14:28.33:0,28,537	0/0:34,0:26:47.33:0,47,1008	1/1:3,17:20:33.11:633,33,0	0/0:28,0:28:75.23:0,75,1978	0/0:29,0:29:66.18:0,66,1798	0/0:21,0:21:33.11:0,33,964	1/1:2,8:10:18.06:346,18,0	0/0:22,0:22:51.17:0,51,1425	0/0:10,0:10:24.08:0,24,701	1/1:6,19:25:51.17:979,51,0	0/0:26,0:26:60.16:0,60,1536	0/0:18,0:18:48.16:0,48,1345	0/0:21,0:20:48.10:0,48,1174	1/1:2,15:17:36.07:653,36,0	1/1:3,25:28:63.21:1210,63,0	0/0:25,1:25:66.23:0,66,1886	0/0:23,0:23:48.15:0,48,1223	0/0:13,0:13:26.81:0,27,650	0/0:44,0:44:99:0,108,2917	0/0:11,0:11:27.08:0,27,728	1/1:1,12:13:30.10:569,30,0	0/1:2,20:22:33.49:926,0,33	0/0:14,0:14:39.12:0,39,1034	0/0:31,0:31:69.23:0,69,1949	0/0:19,0:18:45.15:0,45,1313	0/0:8,0:8:21.07:0,21,612
chr10	35378847	.	GCACA	G	7821.92	PASS	AB=0.659;AC=50;AF=0.926;AN=54;BaseQRankSum=-0.538;DP=709;FS=0.000;HRun=0;HaplotypeScore=173.5253;InbreedingCoeff=0.2941;MQ=56.14;MQ0=9;MQRankSum=2.500;QD=12.13;ReadPosRankSum=2.202;VQSLOD=4.1928;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:31,0:47:11.93:304,12,0	1/1:6,7:13:19.31:288,19,0	./.	0/0:37,0:21:4.53:0,5,25	1/1:8,0:25:21.02:195,21,0	1/1:18,3:26:18.04:226,18,0	1/1:14,12:27:30.09:435,30,0	1/1:26,0:27:18.43:171,18,0	1/1:8,0:22:18.63:236,19,0	1/1:16,10:25:33.02:447,33,0	1/1:6,11:18:24.03:332,24,0	1/1:16,0:33:16.02:236,16,0	1/1:6,9:21:9.69:341,10,0	1/1:13,12:25:24.08:380,24,0	1/1:16,14:33:45.03:633,45,0	1/1:14,0:38:45.68:400,46,0	1/1:10,0:23:17.86:154,18,0	1/1:8,9:18:29.99:455,30,0	1/1:8,2:11:20.63:214,21,0	0/1:10,9:20:13.87:177,0,14	1/1:25,13:40:24.07:341,24,0	1/1:14,6:21:21.06:295,21,0	1/1:10,0:16:6.01:56,6,0	0/1:13,0:28:25.32:97,0,25	1/1:9,2:16:14.90:166,15,0	1/1:21,9:33:35.13:487,35,0	1/1:10,5:19:39:443,39,0	1/1:3,7:10:21.06:313,21,0
chr10	35381310	.	AG	A	7593.06	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=14.373;DP=771;FS=4.030;HRun=1;HaplotypeScore=72.3027;InbreedingCoeff=0.9807;MQ=82.89;MQ0=0;MQRankSum=-7.539;QD=39.96;ReadPosRankSum=4.991;VQSLOD=5.4288;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:90.31:0,90,1439	0/0:8,0:8:24.08:0,24,376	0/0:34,0:34:99:0,102,1442	0/0:24,0:24:66.22:0,66,1000	1/1:0,29:29:78.26:1091,78,0	0/0:28,0:28:84.29:0,84,1343	0/0:25,0:25:75.26:0,75,1199	0/0:35,0:35:99:0,105,1617	1/1:0,24:24:69.23:965,69,0	0/0:42,0:42:99:0,123,1966	0/0:20,0:20:60.20:0,60,957	1/1:0,34:34:99:1427,102,0	0/0:26,0:26:78.27:0,78,1244	0/0:28,2:30:6.44:0,6,1232	0/0:43,0:43:99:0,129,1992	1/1:0,31:31:90.30:1258,90,0	1/1:0,34:34:90.30:1259,90,0	0/0:34,0:34:99:0,99,1555	0/0:23,0:23:69.24:0,69,1103	0/0:33,0:33:99:0,99,1534	0/0:29,0:29:87.30:0,87,1389	0/0:23,0:23:69.22:0,69,1079	1/1:0,22:22:66.22:923,66,0	1/1:0,16:16:48.16:671,48,0	0/0:37,0:37:99:0,111,1773	0/0:23,0:23:69.24:0,69,1099	0/0:28,0:28:84.24:0,84,1309	0/0:6,0:6:18.06:0,18,288
chr10	35382140	.	C	CACAG	27671.55	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-15.436;DP=693;FS=12.578;HRun=0;HaplotypeScore=100.1837;InbreedingCoeff=0.9845;MQ=81.95;MQ0=0;MQRankSum=-7.684;QD=65.42;ReadPosRankSum=1.984;VQSLOD=6.2514;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,129,2385	1/1:1,13:15:39.13:1031,39,0	0/0:28,0:28:80.61:0,81,1312	0/0:26,0:26:69.23:0,69,1198	0/0:25,0:25:75.26:0,75,1397	1/1:3,22:25:60.21:1577,60,0	1/1:2,18:21:57.20:1517,57,0	1/1:11,19:31:87.25:1976,87,0	0/0:17,0:17:51.17:0,51,944	1/1:1,20:21:63.20:1596,63,0	1/1:3,20:23:48.07:1276,48,0	0/0:29,0:29:87.30:0,87,1621	1/1:5,29:37:85.33:2386,85,0	1/1:1,26:28:75.26:1999,75,0	1/1:2,24:27:60.21:1600,60,0	0/0:19,0:19:51.17:0,51,930	0/0:36,0:36:99:0,102,1897	1/1:1,22:23:54.19:1440,54,0	1/1:4,17:22:63.22:1591,63,0	1/1:6,22:28:63.22:1678,63,0	1/1:3,21:24:51.65:1359,52,0	1/1:4,26:30:69.24:1829,69,0	0/0:17,0:17:48.16:0,48,896	0/0:24,0:24:72.25:0,72,1322	1/1:0,15:15:42.14:1119,42,0	1/1:4,24:29:81.28:2123,81,0	1/1:2,19:21:54.19:1413,54,0	1/1:0,3:3:6.02:160,6,0
chr10	35382267	.	A	ATT	3218.15	PASS	AB=0.952;AC=17;AF=0.304;AN=56;BaseQRankSum=-7.595;DP=510;FS=2.024;HRun=10;HaplotypeScore=64.2530;InbreedingCoeff=0.7745;MQ=68.07;MQ0=2;MQRankSum=-0.675;QD=19.39;ReadPosRankSum=-0.060;VQSLOD=2.4373;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:3,0:27:70.90:0,71,321	0/1:5,1:6:35.69:36,0,52	0/1:19,0:13:6.39:6,0,130	0/1:13,0:8:0.27:0,0,104	1/1:6,13:20:38.62:546,39,0	0/0:23,0:25:56.53:0,57,535	0/0:16,0:18:47.78:0,48,459	0/0:27,0:27:68.98:0,69,667	1/1:5,7:13:17.55:233,18,0	0/0:17,0:17:36.05:0,36,366	0/0:24,0:24:51.04:0,51,513	1/1:5,20:26:51.13:734,51,0	0/0:16,0:16:39.03:0,39,388	0/0:21,0:21:30.62:0,31,332	0/0:10,0:10:27.06:0,27,275	1/1:2,10:12:27.09:403,27,0	1/1:8,21:29:50.66:724,51,0	0/0:28,0:28:75.13:0,75,754	0/0:19,0:19:42.04:0,42,421	0/0:19,0:20:51.08:0,51,511	0/0:6,0:6:18.04:0,18,183	0/0:19,0:19:22.25:0,22,432	1/1:3,10:15:35.05:436,35,0	1/1:3,9:12:5.73:295,6,0	0/0:15,0:17:32.51:0,33,363	0/0:20,0:21:39.06:0,39,420	0/0:18,0:19:41.79:0,42,473	0/0:9,0:10:23.76:0,24,225
chr10	35382662	.	T	TAACA	3119.03	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-8.946;DP=691;FS=5.756;HRun=0;HaplotypeScore=107.9388;InbreedingCoeff=0.9378;MQ=89.51;MQ0=0;MQRankSum=-5.861;QD=55.70;ReadPosRankSum=2.644;VQSLOD=4.8293;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,49:56:99:3214,126,0	0/0:8,0:8:18.05:0,18,297	0/0:31,0:31:81.17:0,81,1259	0/0:25,0:25:60.08:0,60,903	0/0:16,0:16:42.13:0,42,734	0/0:24,0:24:63.18:0,63,1076	0/0:32,0:32:87.26:0,87,1487	0/0:28,0:28:75.24:0,75,1302	0/0:25,0:25:66.20:0,66,1135	0/0:31,0:31:72.22:0,72,1249	0/0:18,0:18:51.17:0,51,927	0/0:20,0:20:54.17:0,54,948	0/0:17,0:17:39.12:0,39,678	0/0:35,0:35:93.27:0,93,1622	0/0:35,0:34:99:0,102,1727	0/0:12,0:12:33.11:0,33,600	0/0:37,0:37:99:0,102,1817	0/0:24,0:24:63.17:0,63,1060	0/0:21,0:21:48.16:0,48,844	0/0:20,0:20:48.15:0,48,842	0/0:28,0:28:81.23:0,81,1376	0/0:20,0:20:54.19:0,54,980	0/0:26,0:26:73.79:0,74,1283	0/0:22,0:21:54.19:0,54,981	0/0:18,0:18:54.17:0,54,945	0/0:34,0:34:99:0,99,1738	0/0:25,0:25:63.18:0,63,1085	0/0:3,0:3:9.03:0,9,163
chr10	35388605	.	A	ATGTG	46489.24	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-7.531;DP=731;FS=7.424;HRun=0;HaplotypeScore=104.8285;InbreedingCoeff=0.9943;MQ=67.76;MQ0=0;MQRankSum=-7.267;QD=65.85;ReadPosRankSum=5.208;VQSLOD=7.0216;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,49:52:99:3612,132,0	1/1:0,7:7:18.06:493,18,0	0/0:10,0:10:24.06:0,24,400	0/0:15,0:15:36.09:0,36,583	1/1:5,14:20:42.14:1136,42,0	1/1:6,30:35:96.29:2559,96,0	1/1:8,24:35:78.27:2133,78,0	1/1:11,14:26:66.23:1761,66,0	1/1:8,24:34:84.29:2271,84,0	1/1:1,22:23:66.23:1739,66,0	1/1:5,12:18:32.77:901,33,0	1/1:3,28:32:84.29:2298,84,0	1/1:11,16:28:60.21:1587,60,0	1/1:1,22:25:66.23:1805,66,0	1/1:9,24:33:81.28:2188,81,0	1/1:7,23:31:75.26:2040,75,0	1/1:2,27:29:72.25:1971,72,0	1/1:3,15:19:42.14:1150,42,0	1/1:3,12:17:51.15:1270,51,0	1/1:1,21:22:63.22:1722,63,0	1/1:5,36:43:81.28:2217,81,0	1/1:0,24:24:66.23:1805,66,0	1/1:7,16:23:42.14:1148,42,0	1/1:0,22:22:54.19:1478,54,0	1/1:4,19:24:54.15:1477,54,0	1/1:7,27:34:86.58:2552,87,0	1/1:6,28:36:87.26:2354,87,0	1/1:2,9:11:30.10:821,30,0
chr10	35388907	.	GAA	G	3738.44	PASS	AB=0.734;AC=41;AF=0.732;AN=56;BaseQRankSum=-7.344;DP=396;FS=4.858;HRun=12;HaplotypeScore=58.6773;InbreedingCoeff=-0.0406;MQ=41.72;MQ0=16;MQRankSum=-2.702;QD=9.66;ReadPosRankSum=2.359;VQSLOD=1.3961;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:12,14:25:29.54:360,0,30	1/1:1,6:6:6:59,6,0	0/0:2,0:1:3.01:0,3,38	0/0:7,0:1:3.01:0,3,36	1/1:6,0:7:6.81:23,7,0	0/1:1,14:16:2.80:280,0,3	1/1:5,15:19:39.08:395,39,0	1/1:11,10:20:3.62:189,4,0	0/1:16,0:20:19.92:20,0,49	1/1:10,10:17:23.97:237,24,0	1/1:2,3:4:2.97:30,3,0	0/1:8,0:18:17.28:17,0,62	0/1:8,6:14:20.63:115,0,21	1/1:0,6:7:11.76:103,12,0	1/1:9,7:15:18.70:184,19,0	0/1:6,0:12:1.22:1,0,39	0/1:15,0:16:11.46:11,0,76	1/1:3,7:9:12.02:122,12,0	1/1:7,6:11:14.97:152,15,0	0/1:6,7:13:19.46:159,0,19	1/1:4,6:8:6:61,6,0	1/1:1,10:11:18.02:182,18,0	0/1:6,0:15:5.24:10,0,5	0/1:17,0:17:10.27:10,0,49	1/1:6,10:16:18:182,18,0	1/1:8,18:26:53.76:515,54,0	1/1:3,11:14:24.03:238,24,0	0/1:9,3:9:32.98:79,0,33
chr10	35388915	.	A	AG	1029.79	PASS	AB=0.770;AC=9;AF=0.161;AN=56;BaseQRankSum=-0.350;DP=483;FS=26.135;HRun=0;HaplotypeScore=87.0878;InbreedingCoeff=0.0426;MQ=41.42;MQ0=19;MQRankSum=-3.492;QD=8.05;ReadPosRankSum=3.081;VQSLOD=1.7831;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:75.18:0,75,528	0/0:9,0:9:17.84:0,18,131	0/1:8,0:3:1.47:1,0,20	0/0:14,0:5:8.69:0,9,48	0/1:3,6:9:36.12:87,0,36	0/0:19,0:19:40.67:0,41,272	0/0:19,0:18:40.81:0,41,236	0/0:26,0:24:55.82:0,56,362	0/1:9,11:20:18.92:305,0,19	0/0:23,0:20:53.17:0,53,383	0/0:10,0:9:23.65:0,24,172	0/1:20,3:23:82.93:114,0,83	0/0:17,0:17:12.20:0,12,187	0/0:12,0:12:26.46:0,26,181	0/0:16,0:15:28.89:0,29,182	1/1:10,1:10:5.02:62,5,0	0/1:13,7:19:62.86:219,0,63	0/0:15,0:13:23.50:0,24,161	0/0:18,0:16:40.65:0,41,260	0/0:13,0:13:29.64:0,30,227	0/0:9,0:7:11.70:0,12,72	0/0:18,0:18:44:0,44,292	0/1:15,4:19:12.73:119,0,13	0/1:10,8:18:34.75:257,0,35	0/0:19,0:18:35.29:0,35,236	0/0:32,0:30:84.96:0,85,564	0/0:19,0:19:41.29:0,41,275	0/0:17,0:14:35.79:0,36,296
chr10	35388928	.	AAG	A	1410.93	PASS	AB=0.951;AC=18;AF=0.321;AN=56;BaseQRankSum=4.547;DP=484;FS=0.427;HRun=0;HaplotypeScore=84.5688;InbreedingCoeff=0.5687;MQ=48.01;MQ0=11;MQRankSum=-0.592;QD=6.98;ReadPosRankSum=-3.407;VQSLOD=2.4197;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:60.73:0,61,700	0/0:9,0:9:23.79:0,24,257	0/1:12,0:4:6.76:7,0,45	0/1:19,0:9:9.04:9,0,79	0/1:7,5:12:13.13:45,0,13	0/0:19,0:19:28.54:0,29,364	0/0:25,0:24:40.85:0,41,416	0/0:27,0:26:28.08:0,28,403	1/1:18,2:20:38.18:325,38,0	0/0:22,0:20:21.47:0,21,592	0/0:9,0:9:20.93:0,21,235	1/1:20,3:23:40.47:319,40,0	0/1:19,0:19:15.17:15,0,209	0/0:10,0:10:22.43:0,22,183	0/1:13,0:13:2.95:3,0,155	1/1:12,1:12:19.96:170,20,0	1/1:21,2:22:18.08:313,18,0	0/0:13,0:11:25.02:0,25,299	0/0:16,0:14:25.54:0,26,281	0/1:15,0:15:2.11:2,0,244	0/0:7,0:5:11.94:0,12,117	0/0:15,0:15:17.30:0,17,244	1/1:13,4:17:12.62:148,13,0	1/1:14,2:16:27.20:244,27,0	0/0:18,0:17:35.87:0,36,431	0/0:32,0:31:60.30:0,60,738	0/0:19,0:19:47.36:0,47,516	0/0:15,0:14:35.92:0,36,448
chr10	35388929	.	AG	A	1364.40	PASS	AB=0.985;AC=17;AF=0.304;AN=56;BaseQRankSum=6.298;DP=484;FS=12.398;HRun=1;HaplotypeScore=77.8372;InbreedingCoeff=0.5402;MQ=48.45;MQ0=11;MQRankSum=-1.317;QD=7.38;ReadPosRankSum=-1.453;VQSLOD=-0.7516;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:39.78:0,40,512	0/0:9,0:9:20.84:0,21,191	0/1:11,1:4:33.51:34,0,35	0/1:19,0:9:3.57:4,0,51	0/1:11,0:11:24.30:36,0,24	0/0:19,0:19:18.06:0,18,257	0/0:25,0:24:44.56:0,45,384	0/0:28,0:27:33.48:0,33,390	1/1:17,2:19:40.71:310,41,0	0/0:22,0:20:28.14:0,28,427	0/0:9,0:9:16.70:0,17,142	1/1:23,1:24:41.57:291,42,0	0/1:19,0:19:8.51:9,0,170	0/0:10,0:10:23.19:0,23,148	0/1:12,0:12:8.73:9,0,120	1/1:14,0:13:22.95:191,23,0	1/1:18,4:21:9.11:280,9,0	0/0:13,0:11:24.53:0,25,235	0/0:16,0:14:23.64:0,24,248	0/0:15,0:15:2.67:0,3,199	0/0:7,0:5:11.91:0,12,99	0/0:15,0:15:3.64:0,4,143	1/1:17,0:17:9.17:137,9,0	1/1:16,0:16:30.01:252,30,0	0/0:18,0:17:35.86:0,36,333	0/0:32,0:31:55.72:0,56,601	0/0:19,0:19:47.17:0,47,414	0/0:14,0:14:34.08:0,34,325
chr10	35390445	.	G	GTTAGTTAA	4670.63	PASS	AB=0.536;AC=15;AF=0.268;AN=56;BaseQRankSum=-5.046;DP=485;FS=4.002;HRun=0;HaplotypeScore=107.2560;InbreedingCoeff=0.7977;MQ=62.13;MQ0=0;MQRankSum=-2.638;QD=42.46;ReadPosRankSum=1.074;VQSLOD=4.6785;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:60.14:0,60,1409	0/1:2,0:15:11.19:220,0,11	0/0:7,0:7:0.91:0,1,59	0/0:3,0:3:6:0,6,55	1/1:2,26:32:68.28:1380,68,0	0/0:23,0:23:69.15:0,69,1475	0/0:10,0:10:30.09:0,30,721	0/0:35,0:35:66.07:0,66,993	1/1:1,13:16:21.07:923,21,0	0/0:20,0:20:57.10:0,57,976	0/0:26,0:27:75.11:0,75,1440	1/1:1,7:9:6.02:264,6,0	0/0:17,0:17:45.08:0,45,957	0/0:11,0:11:27:0,27,403	0/0:12,0:12:36.06:0,36,718	1/1:0,10:11:12.04:528,12,0	1/1:1,13:14:15.05:628,15,0	0/0:17,0:17:44.98:0,45,839	0/0:29,0:29:75.05:0,75,951	0/0:22,0:22:66.13:0,66,1433	0/0:24,0:24:66.04:0,66,1280	0/0:7,0:7:21.04:0,21,416	1/1:2,10:12:21.07:713,21,0	1/1:0,1:1:2.90:16,3,0	0/0:17,0:17:51.09:0,51,1024	0/0:22,0:22:66.15:0,66,1361	0/0:26,0:27:75.09:0,75,1447	0/0:23,0:23:69.07:0,69,1492
chr10	35390906	.	TC	T	5871.93	PASS	AB=1.000;AC=48;AF=0.857;AN=56;BaseQRankSum=-4.279;DP=356;FS=4.313;HRun=10;HaplotypeScore=45.8763;InbreedingCoeff=0.2969;MQ=71.75;MQ0=0;MQRankSum=-2.631;QD=17.27;ReadPosRankSum=3.149;VQSLOD=5.2529;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,15:18:35.98:312,36,0	1/1:1,2:3:6:52,6,0	0/0:10,0:10:8.20:0,8,100	0/0:6,0:5:5.96:0,6,58	0/1:6,0:6:12.72:13,0,26	1/1:1,24:25:65.99:573,66,0	1/1:0,18:18:47.99:417,48,0	1/1:3,17:20:38.95:335,39,0	0/1:9,0:9:15.44:22,0,15	1/1:1,16:16:44.96:385,45,0	1/1:3,20:23:53.84:451,54,0	1/1:11,0:11:4.43:19,4,0	1/1:3,9:12:20.99:182,21,0	1/1:2,5:7:15:130,15,0	1/1:0,13:13:35.99:312,36,0	0/1:12,0:12:16.48:16,0,49	0/1:7,0:7:16.46:16,0,25	1/1:0,5:5:12:104,12,0	1/1:3,15:18:47.97:412,48,0	1/1:2,17:19:53.94:461,54,0	1/1:2,8:10:20.99:182,21,0	1/1:1,6:7:12:104,12,0	1/1:9,0:9:2.79:14,3,0	1/1:7,0:7:11.49:60,11,0	1/1:2,11:13:32.99:286,33,0	1/1:5,14:19:44.98:387,45,0	1/1:0,20:20:44.99:391,45,0	1/1:2,10:12:26.99:234,27,0
chr10	35392409	.	C	CTTT	5901.93	PASS	AB=0.587;AC=49;AF=0.875;AN=56;BaseQRankSum=-1.740;DP=577;FS=2.171;HRun=13;HaplotypeScore=106.8913;InbreedingCoeff=0.4159;MQ=76.86;MQ0=0;MQRankSum=-2.384;QD=10.75;ReadPosRankSum=0.953;VQSLOD=2.6490;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:9,20:34:42.41:536,42,0	1/1:4,1:12:20.88:190,21,0	0/0:19,0:17:15.61:0,16,127	0/0:9,0:9:3.66:0,4,46	0/1:10,0:32:51.04:51,0,61	1/1:2,1:23:43.13:370,43,0	1/1:5,6:21:31.19:335,31,0	1/1:13,1:30:20.11:384,20,0	1/1:3,0:19:17.20:72,17,0	1/1:6,0:18:23.43:183,23,0	1/1:3,1:22:46.31:367,46,0	1/1:8,0:18:11.11:29,11,0	1/1:5,7:17:25.41:388,25,0	1/1:4,0:18:31.06:255,31,0	1/1:9,1:29:25.51:235,26,0	0/1:5,0:21:12.35:12,0,17	0/1:8,0:24:38.46:64,0,38	1/1:3,0:16:23.91:182,24,0	1/1:11,1:18:20.10:154,20,0	1/1:10,1:31:54.86:474,55,0	1/1:5,0:15:27.37:206,27,0	1/1:7,2:22:32.95:350,33,0	1/1:5,0:17:13.08:31,13,0	1/1:3,0:11:3.74:8,4,0	1/1:6,0:25:37.08:273,37,0	1/1:7,1:26:49.59:450,50,0	1/1:2,0:21:20.89:156,21,0	1/1:3,1:9:14.96:145,15,0
chr10	35393662	.	G	GAAAA	11692.42	PASS	AB=0.751;AC=41;AF=0.732;AN=56;BaseQRankSum=-6.602;DP=631;FS=1.787;HRun=11;HaplotypeScore=130.7039;InbreedingCoeff=0.5380;MQ=75.61;MQ0=0;MQRankSum=-4.109;QD=22.44;ReadPosRankSum=-5.572;VQSLOD=1.7812;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:39:21.65:0,22,62	1/1:3,7:11:21.07:473,21,0	0/1:25,0:22:29.17:29,0,236	0/1:17,0:17:3.81:4,0,182	0/1:6,0:42:48.20:110,0,48	1/1:6,7:19:15.05:271,15,0	1/1:7,8:16:27.51:517,28,0	1/1:22,13:37:67.58:1170,68,0	0/1:9,0:23:8.38:8,0,13	1/1:10,20:33:66.15:1204,66,0	1/1:8,10:25:39.03:592,39,0	0/0:10,0:10:24.07:0,24,327	1/1:3,5:8:12.51:247,13,0	1/1:7,12:20:21.03:377,21,0	1/1:5,10:19:32.32:637,32,0	0/0:4,0:19:0.77:0,1,21	0/1:6,0:19:14.05:14,0,50	1/1:6,11:19:21.07:394,21,0	1/1:12,6:20:39.07:705,39,0	1/1:5,19:26:66.10:1152,66,0	1/1:6,17:27:28.45:583,28,0	1/1:8,6:17:24.05:405,24,0	0/0:23,0:25:55.22:0,55,686	0/0:15,0:17:45.03:0,45,558	1/1:3,17:25:33.11:553,33,0	1/1:15,14:31:59.85:978,60,0	1/1:15,6:23:29.31:471,29,0	1/1:5,10:17:39.10:796,39,0
chr10	35395187	.	CTTT	C	6211.49	PASS	AB=0.590;AC=37;AF=0.661;AN=56;BaseQRankSum=2.223;DP=502;FS=2.189;HRun=15;HaplotypeScore=108.4903;InbreedingCoeff=0.7862;MQ=63.69;MQ0=9;MQRankSum=-2.417;QD=19.29;ReadPosRankSum=0.671;VQSLOD=4.0355;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:40:6.48:0,6,76	1/1:2,4:6:8.96:101,9,0	0/0:19,0:8:6.02:0,6,90	0/0:24,0:13:15.03:0,15,177	0/0:1,0:10:9.03:0,9,21	1/1:7,14:20:39.05:437,39,0	1/1:5,13:19:35.96:388,36,0	1/1:14,3:17:8.65:85,9,0	0/0:7,0:17:11.73:0,12,74	1/1:8,9:18:29.85:320,30,0	1/1:3,9:12:24.01:269,24,0	0/1:7,2:23:30.44:42,0,30	1/1:4,14:20:36.91:406,37,0	1/1:7,8:15:26.97:292,27,0	1/1:4,22:27:57.02:623,57,0	0/0:5,0:13:7.48:0,7,17	0/0:3,0:24:7.81:0,8,47	1/1:2,19:21:51.13:571,51,0	1/1:7,3:9:8.91:101,9,0	1/1:2,7:9:21.04:235,21,0	1/1:1,8:9:14.99:168,15,0	1/1:1,7:8:14.98:168,15,0	0/0:5,0:8:3.44:0,3,21	0/0:5,0:23:19.94:0,20,44	1/1:4,11:15:26.93:303,27,0	1/1:9,21:30:62.96:690,63,0	1/1:4,20:27:62.68:658,63,0	1/1:3,10:13:32.97:354,33,0
chr10	35396621	.	TTC	T	130.06	PASS	AB=0.868;AC=9;AF=0.161;AN=56;BaseQRankSum=2.093;DP=476;FS=21.663;HRun=0;HaplotypeScore=79.0991;InbreedingCoeff=-0.2086;MQ=67.00;MQ0=2;MQRankSum=-6.274;QD=0.88;ReadPosRankSum=-2.108;VQSLOD=-0.4624;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,1:25:33.52:0,34,717	0/1:5,3:8:72.11:72,0,180	0/0:9,0:7:18.06:0,18,311	0/0:25,0:18:32.38:0,32,511	0/0:24,0:23:63.21:0,63,1177	0/0:15,1:16:0.08:0,0,760	0/0:7,1:8:21.07:0,21,358	0/1:27,3:30:36:36,0,1330	0/0:13,0:13:39.13:0,39,745	0/0:19,1:20:12.24:0,12,997	0/0:17,2:16:45.15:0,45,844	0/0:16,0:16:48.16:0,48,904	0/1:12,2:14:5.94:6,0,639	0/1:12,2:14:47.90:48,0,651	0/1:13,2:15:5.99:6,0,654	0/0:17,0:17:42.14:0,42,782	0/0:36,0:36:99:0,105,1880	0/1:9,2:10:38.28:38,0,377	0/1:21,2:23:16.08:16,0,1102	0/1:11,2:13:8.95:9,0,576	0/0:16,0:16:44.98:0,45,793	0/0:3,1:4:9.03:0,9,174	0/0:10,0:10:27.09:0,27,521	0/0:15,0:14:39.12:0,39,685	0/0:15,0:15:9.38:0,9,718	0/0:19,1:19:57.20:0,57,1095	0/0:15,3:16:1.51:0,2,738	0/1:18,2:20:30.55:31,0,902
chr10	35396976	.	TC	T	6901.14	PASS	AB=0.906;AC=54;AF=0.964;AN=56;BaseQRankSum=-2.331;DP=382;FS=3.502;HRun=3;HaplotypeScore=88.1629;InbreedingCoeff=-0.0483;MQ=55.84;MQ0=6;MQRankSum=2.179;QD=18.07;ReadPosRankSum=2.216;VQSLOD=4.5725;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,15:21:53.36:471,53,0	1/1:3,3:6:15:149,15,0	0/1:15,0:10:37.13:37,0,107	0/1:10,3:6:29.05:29,0,47	1/1:12,3:22:38.75:355,39,0	1/1:3,14:16:47.91:423,48,0	1/1:1,16:15:41.80:362,42,0	1/1:2,10:22:55.39:519,55,0	1/1:8,5:10:23.99:221,24,0	1/1:6,8:18:45.02:471,45,0	1/1:3,1:4:9.02:96,9,0	1/1:7,4:10:12.01:113,12,0	1/1:3,5:8:18.01:176,18,0	1/1:2,5:6:9:83,9,0	1/1:3,8:10:24.02:235,24,0	1/1:7,1:8:21.03:212,21,0	1/1:12,2:11:23.40:220,23,0	1/1:5,8:12:29.99:280,30,0	1/1:9,5:11:20.41:241,20,0	1/1:6,2:10:21.02:207,21,0	1/1:11,4:8:8.69:79,9,0	1/1:5,2:6:9.02:97,9,0	1/1:8,4:10:21.02:219,21,0	1/1:16,0:16:35.62:366,36,0	1/1:12,5:15:36.07:369,36,0	1/1:4,10:18:50.71:463,51,0	1/1:1,5:8:15:137,15,0	1/1:3,9:10:26.98:271,27,0
chr10	35396977	.	C	CCT	7910.39	PASS	AB=0.933;AC=54;AF=0.964;AN=56;BaseQRankSum=-2.754;DP=375;FS=0.000;HRun=0;HaplotypeScore=89.2916;InbreedingCoeff=-0.0482;MQ=54.19;MQ0=6;MQRankSum=2.555;QD=21.09;ReadPosRankSum=2.718;VQSLOD=4.8238;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:21,1:21:50.38:411,50,0	1/1:3,3:6:14.93:148,15,0	0/1:11,2:8:95.33:95,0,134	0/1:14,0:7:26:26,0,40	1/1:11,12:22:39.12:588,39,0	1/1:14,3:16:45.54:406,46,0	1/1:16,1:15:40.05:361,40,0	1/1:23,0:22:49.72:556,50,0	1/1:5,8:10:24.07:369,24,0	1/1:16,4:18:40.94:400,41,0	1/1:1,3:4:9.02:95,9,0	1/1:6,3:9:11.98:189,12,0	1/1:6,1:8:17.27:158,17,0	1/1:6,0:6:8.88:71,9,0	1/1:11,0:10:22.53:171,23,0	1/1:1,6:7:21.06:337,21,0	1/1:7,7:11:24.07:383,24,0	1/1:12,2:12:29.14:303,29,0	1/1:7,5:9:19.94:206,20,0	1/1:5,5:10:21.05:241,21,0	1/1:4,8:5:8.28:99,8,0	1/1:4,3:6:9.02:96,9,0	1/1:6,6:10:21.07:338,21,0	1/1:3,13:16:29.62:588,30,0	1/1:8,8:15:38.95:396,39,0	1/1:17,3:18:50.70:589,51,0	1/1:7,1:8:13.47:89,13,0	1/1:10,2:10:22.51:201,23,0
chr10	35396978	.	C	CT	5726.53	PASS	AB=1.000;AC=54;AF=0.964;AN=56;BaseQRankSum=-1.697;DP=373;FS=1.414;HRun=0;HaplotypeScore=89.9268;InbreedingCoeff=0.0556;MQ=54.06;MQ0=8;MQRankSum=1.366;QD=15.35;ReadPosRankSum=1.839;VQSLOD=6.6497;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:22,1:20:51.33:307,51,0	1/1:6,0:6:14.68:91,15,0	0/1:15,0:8:10.37:10,0,109	0/1:14,0:7:9.61:10,0,34	1/1:23,0:22:38.72:403,39,0	1/1:17,0:16:46.19:322,46,0	1/1:17,0:15:40.66:338,41,0	1/1:22,0:21:52.72:325,53,0	1/1:13,0:10:24.07:322,24,0	1/1:22,0:18:41.11:257,41,0	1/1:4,0:4:8.84:54,9,0	1/1:9,0:9:11.73:166,12,0	1/1:7,1:8:17.55:149,18,0	1/1:7,0:6:8.93:75,9,0	1/1:11,0:10:22.91:149,23,0	1/1:7,0:7:21.05:265,21,0	1/1:13,1:10:23.97:317,24,0	1/1:12,2:12:28.93:210,29,0	1/1:12,0:9:1.05:131,1,0	1/1:9,0:9:20.69:134,21,0	1/1:12,0:5:8.26:43,8,0	1/1:6,0:5:8.83:54,9,0	1/1:12,0:10:20.58:208,21,0	1/1:16,0:16:39.47:489,39,0	1/1:16,0:14:35.45:246,35,0	1/1:20,0:18:49.88:393,50,0	1/1:9,0:8:14.18:98,14,0	1/1:12,0:10:23.56:162,24,0
chr10	35396980	.	TC	T	6222.02	PASS	AB=0.915;AC=54;AF=0.964;AN=56;BaseQRankSum=-3.325;DP=371;FS=0.000;HRun=3;HaplotypeScore=88.6286;InbreedingCoeff=0.2777;MQ=52.19;MQ0=9;MQRankSum=2.258;QD=16.77;ReadPosRankSum=1.413;VQSLOD=4.4729;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,16:18:47.62:397,48,0	1/1:0,6:6:15:149,15,0	0/1:15,1:7:6.39:6,0,106	0/1:14,2:7:3.26:3,0,51	1/1:8,15:22:37.28:336,37,0	1/1:0,17:16:47.89:423,48,0	1/1:0,17:15:41.80:362,42,0	1/1:12,10:21:53.17:465,53,0	1/1:0,13:10:23.99:221,24,0	1/1:11,11:18:35.90:357,36,0	1/1:0,4:4:9.02:96,9,0	1/1:3,7:9:12.01:113,12,0	1/1:1,6:7:15:140,15,0	1/1:2,5:6:9:83,9,0	1/1:3,8:10:19.25:165,19,0	1/1:0,7:7:21.03:212,21,0	1/1:5,9:10:23.30:203,23,0	1/1:3,10:12:25.45:239,25,0	1/1:3,10:9:21.04:212,21,0	1/1:2,7:9:20.99:203,21,0	1/1:0,12:5:8.69:78,9,0	1/1:1,5:5:9.02:97,9,0	1/1:2,10:10:18.01:182,18,0	1/1:2,13:15:32.63:343,33,0	1/1:3,13:14:36.07:369,36,0	1/1:9,11:18:50.56:447,51,0	1/1:3,6:8:15:137,15,0	1/1:1,11:10:20.85:184,21,0
chr10	35397012	.	CCGT	C	580.15	PASS	AB=0.958;AC=28;AF=0.560;AN=50;BaseQRankSum=2.327;DP=316;FS=1.756;HRun=0;HaplotypeScore=73.0634;InbreedingCoeff=0.0126;MQ=41.22;MQ0=20;MQRankSum=-4.420;QD=2.49;ReadPosRankSum=-1.010;VQSLOD=1.4989;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:14,2:13:13.76:167,14,0	1/1:2,0:2:0.89:2,1,0	0/0:34,0:5:11.80:0,12,112	0/1:25,0:4:17.58:18,0,41	0/1:14,0:13:8.09:8,0,217	0/1:16,0:14:8.30:30,0,8	1/1:17,0:15:21.55:163,22,0	0/1:26,0:22:53.96:130,0,54	0/1:10,5:14:25.70:26,0,185	0/0:15,0:8:3.92:0,4,51	./.	0/0:8,0:8:5.38:0,5,99	1/1:5,0:5:2.88:15,3,0	0/1:5,0:4:0.81:1,0,12	1/1:4,0:4:3.87:24,4,0	0/0:5,1:6:7.71:0,8,203	0/1:14,1:11:20.04:20,0,102	0/0:7,0:6:7.25:0,7,41	0/0:6,0:4:8.04:0,8,55	./.	1/1:13,1:8:2.70:13,3,0	1/1:4,0:4:0.89:2,1,0	0/1:10,0:10:5.55:6,0,150	0/1:15,2:15:22.57:23,0,257	./.	0/1:16,0:12:52.28:52,0,53	1/1:4,0:3:3.43:19,3,0	1/1:7,0:3:2.23:7,2,0
chr10	35397040	.	CTCCTCTTCTTCTTCTTCT	C	1143.66	PASS	AB=0.990;AC=27;AF=0.563;AN=48;BaseQRankSum=-0.764;DP=428;FS=0.000;HRun=0;HaplotypeScore=88.1272;InbreedingCoeff=-0.0103;MQ=26.43;MQ0=75;MQRankSum=1.066;QD=3.64;ReadPosRankSum=2.818;VQSLOD=1.2816;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:11:11.11:11,0,31	1/1:5,0:3:5.27:138,5,0	./.	0/0:17,0:2:3.45:0,3,23	0/1:16,0:12:56.63:57,0,96	1/1:11,7:11:2.14:57,2,0	1/1:20,0:10:1.92:50,2,0	0/1:27,0:17:8.33:8,0,48	0/0:13,0:8:4.83:0,5,40	0/1:37,0:15:64.04:123,0,64	./.	0/0:11,0:7:5.61:0,6,68	1/1:5,1:4:2.69:124,3,0	1/1:14,0:10:2.79:14,3,0	0/1:10,0:8:0.71:14,0,1	0/0:7,0:5:5.80:0,6,40	0/0:21,0:9:10.51:0,11,123	0/0:14,0:8:2.51:0,3,7	1/1:31,0:13:12.88:198,13,0	./.	0/1:22,0:12:29.83:63,0,30	1/1:12,0:9:2.76:34,3,0	0/1:14,0:9:31.43:31,0,33	0/1:17,0:14:3.28:3,0,61	1/1:9,0:5:2.08:118,2,0	0/1:22,0:14:78.70:79,0,311	./.	1/1:9,0:5:5.99:161,6,0
chr10	35400776	.	AT	A	2324.74	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.186;DP=1175;FS=3.532;HRun=1;HaplotypeScore=183.8195;InbreedingCoeff=0.9992;MQ=57.64;MQ0=7;MQRankSum=-0.221;QD=31.42;ReadPosRankSum=0.096;VQSLOD=3.2072;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:64,0:62:99:0,126,2014	0/0:11,0:11:27.09:0,27,431	0/0:63,5:36:95.98:0,96,1342	0/0:68,5:36:50.07:0,50,1146	0/0:26,0:26:57.16:0,57,864	0/0:21,1:22:57.18:0,57,887	0/0:44,0:43:99:0,112,1692	0/0:44,1:44:85.07:0,85,1923	0/0:39,0:39:65.24:0,65,1273	1/1:2,54:56:99:2055,153,0	1/1:2,16:17:29.53:391,30,0	0/0:53,0:53:99:0,105,1674	0/0:34,0:34:81.07:0,81,1269	0/0:40,0:40:99:0,105,1649	0/0:51,0:51:99:0,114,1750	0/0:45,0:44:90.03:0,90,1433	0/0:32,0:32:64.78:0,65,1151	0/0:25,0:25:69.20:0,69,1071	0/0:28,0:28:81.25:0,81,1269	0/0:31,0:31:81.26:0,81,1271	0/0:123,0:123:99:0,304,4760	0/0:47,0:47:99:0,114,1817	0/0:30,0:30:71.77:0,72,1127	0/0:50,1:50:80.73:0,81,1267	0/0:30,0:30:80.79:0,81,1270	0/0:42,0:42:99:0,126,1968	0/0:26,0:26:72.21:0,72,1091	0/0:20,0:20:60.20:0,60,958
chr10	35403517	.	G	GT	2604.45	PASS	AB=0.510;AC=25;AF=0.833;AN=30;BaseQRankSum=-2.408;DP=172;FS=0.000;HRun=0;HaplotypeScore=37.1470;InbreedingCoeff=0.4889;MQ=42.02;MQ0=1;MQRankSum=0.407;QD=17.13;ReadPosRankSum=-0.237;VQSLOD=4.8257;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:0,7:7:0.94:0,1,3	./.	./.	./.	0/1:0,2:2:0:0,0,0	./.	1/1:0,19:19:8.10:141,8,0	1/1:0,3:4:9.03:144,9,0	./.	1/1:0,5:5:15.05:238,15,0	0/1:0,1:1:0:0,0,0	./.	1/1:0,4:4:6.02:84,6,0	0/1:1,8:9:0:0,0,0	./.	./.	1/1:1,12:14:27.05:400,27,0	1/1:0,11:11:30.57:479,31,0	1/1:0,7:7:18.06:287,18,0	./.	1/1:0,39:37:21.07:335,21,0	./.	./.	1/1:0,26:26:17.90:286,18,0	1/1:1,6:7:6.02:96,6,0	1/1:0,4:4:12.04:191,12,0	./.	./.
chr10	35405681	.	T	TC	11001.80	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-12.838;DP=513;FS=1.133;HRun=5;HaplotypeScore=44.6519;InbreedingCoeff=0.9864;MQ=83.68;MQ0=0;MQRankSum=-1.606;QD=32.94;ReadPosRankSum=-1.603;VQSLOD=4.5178;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:87.15:0,87,920	1/1:0,10:10:30.10:395,30,0	0/0:16,0:16:38.31:0,38,433	0/0:14,0:14:27.03:0,27,279	0/0:15,0:15:45.11:0,45,484	1/1:2,22:24:57.19:750,57,0	1/1:1,14:15:33.11:434,33,0	1/1:3,20:23:60.20:788,60,0	0/0:12,0:12:36.09:0,36,387	1/1:0,14:14:42.12:534,42,0	1/1:0,16:16:39.06:491,39,0	0/0:22,1:23:29.70:0,30,669	1/1:1,19:20:51.17:671,51,0	1/1:1,12:13:36.12:474,36,0	1/1:2,17:19:45.15:592,45,0	0/0:20,0:20:60.15:0,60,645	0/0:21,0:20:63.13:0,63,666	1/1:1,24:25:66.21:868,66,0	1/1:5,18:23:54.16:694,54,0	1/1:0,18:18:45.15:589,45,0	1/1:2,20:22:57.19:750,57,0	1/1:0,4:4:12.04:158,12,0	0/0:13,0:13:38.98:0,39,391	0/0:13,0:13:39.04:0,39,398	1/1:0,15:15:45.15:587,45,0	1/1:4,27:31:81.19:1003,81,0	1/1:1,32:32:84.27:1105,84,0	1/1:4,5:9:9.03:118,9,0
chr10	35406778	.	AGTTT	A	3184.92	PASS	AB=0.958;AC=9;AF=0.161;AN=56;BaseQRankSum=10.824;DP=735;FS=1.521;HRun=0;HaplotypeScore=119.7770;InbreedingCoeff=0.8459;MQ=65.11;MQ0=1;MQRankSum=2.055;QD=23.95;ReadPosRankSum=2.368;VQSLOD=3.1946;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:35:47.58:0,48,727	0/0:19,0:19:39.13:0,39,935	0/0:28,0:22:30.10:0,30,655	0/0:19,0:18:30.10:0,30,650	1/1:7,22:29:57.19:931,57,0	0/0:18,0:18:39.13:0,39,949	0/1:22,1:23:3.82:4,0,968	0/0:42,0:42:69.22:0,69,1503	1/1:6,20:26:54.18:882,54,0	0/0:34,0:35:59.33:0,59,1981	0/0:15,0:15:42.14:0,42,1013	0/0:25,0:25:60.21:0,60,1458	0/0:19,0:19:42.13:0,42,957	0/0:17,0:17:36.12:0,36,865	0/0:40,0:40:90.31:0,90,2150	1/1:6,18:24:39.13:637,39,0	1/1:8,22:31:22.21:893,22,0	0/0:27,1:28:5.19:0,5,1119	0/0:19,0:19:27.09:0,27,644	0/0:28,0:28:66.23:0,66,1596	0/0:36,0:36:90.30:0,90,2103	0/0:24,0:24:5.20:0,5,1190	0/0:23,0:23:57.20:0,57,1385	0/0:23,0:23:51.17:0,51,1218	0/0:31,0:30:69.24:0,69,1644	0/0:36,0:36:78.27:0,78,1891	0/0:26,0:26:60.21:0,60,1433	0/0:16,0:16:42.02:0,42,871
chr10	35407412	.	TTG	T	4484.03	PASS	AC=50;AF=0.926;AN=54;BaseQRankSum=4.921;DP=230;FS=16.163;HRun=0;HaplotypeScore=101.1907;InbreedingCoeff=0.7350;MQ=79.37;MQ0=0;MQRankSum=-4.801;QD=20.95;ReadPosRankSum=3.310;VQSLOD=4.4382;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,15:17:44.67:311,45,0	./.	0/0:9,0:9:24.19:0,24,203	0/0:7,0:7:17.94:0,18,147	1/1:0,6:6:10.18:36,10,0	1/1:0,5:5:13.88:89,14,0	1/1:2,10:12:33.22:204,33,0	1/1:0,16:15:41.01:285,41,0	1/1:1,8:9:20.01:177,20,0	1/1:0,5:5:11.62:80,12,0	1/1:0,5:5:10.79:38,11,0	1/1:3,10:13:17.04:320,17,0	1/1:1,7:8:23.71:268,24,0	1/1:2,7:9:23.74:240,24,0	1/1:1,12:13:37.22:402,37,0	1/1:2,3:5:1.65:51,2,0	1/1:2,12:14:37.41:360,37,0	1/1:0,4:4:12.04:164,12,0	1/1:0,4:4:11.91:107,12,0	1/1:0,8:8:14.02:112,14,0	1/1:1,13:14:30.74:233,31,0	1/1:2,1:3:5.98:62,6,0	1/1:0,7:7:16.33:79,16,0	1/1:1,9:10:28.30:291,28,0	1/1:3,6:9:24.33:193,24,0	1/1:0,4:4:11.64:67,12,0	1/1:1,8:9:26.04:196,26,0	1/1:3,2:5:11.95:118,12,0
chr10	35407416	.	A	ACT	7535.79	PASS	AC=50;AF=0.926;AN=54;BaseQRankSum=2.388;DP=255;FS=5.974;HRun=0;HaplotypeScore=97.2985;InbreedingCoeff=0.7336;MQ=79.49;MQ0=0;MQRankSum=-4.503;QD=31.80;ReadPosRankSum=1.551;VQSLOD=6.8973;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,15:19:50.92:524,51,0	./.	0/0:11,0:11:3.10:0,3,80	0/0:7,0:7:17.49:0,17,100	1/1:1,6:7:17.39:136,17,0	1/1:0,5:5:14.97:148,15,0	1/1:4,10:14:35.93:346,36,0	1/1:3,16:18:53.63:598,54,0	1/1:1,8:9:24.01:322,24,0	1/1:1,5:6:15.02:187,15,0	1/1:2,5:7:20.55:161,21,0	1/1:3,10:13:28.68:454,29,0	1/1:3,7:10:24.06:364,24,0	1/1:2,7:9:27.07:397,27,0	1/1:2,12:14:42.01:595,42,0	1/1:1,3:4:7.48:72,7,0	1/1:3,12:15:42:548,42,0	1/1:1,4:5:12.04:212,12,0	1/1:2,4:6:12.03:154,12,0	1/1:2,8:10:28.46:288,28,0	1/1:2,13:15:35.96:391,36,0	1/1:2,1:3:6.02:110,6,0	1/1:0,7:7:20.78:189,21,0	1/1:3,9:12:29.98:410,30,0	1/1:2,6:9:26.82:338,27,0	1/1:2,4:6:15.03:176,15,0	1/1:1,8:9:27.02:303,27,0	1/1:2,2:4:9.03:112,9,0
chr10	35407604	.	GA	G	2045.07	PASS	AB=0.657;AC=52;AF=0.929;AN=56;BaseQRankSum=-1.964;DP=320;FS=1.309;HRun=13;HaplotypeScore=46.9880;InbreedingCoeff=0.1701;MQ=47.86;MQ0=30;MQRankSum=0.676;QD=6.64;ReadPosRankSum=2.216;VQSLOD=1.8024;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,0:25:32.09:92,32,0	1/1:1,1:1:2.98:22,3,0	1/1:14,0:2:2.04:6,2,0	0/0:12,0:3:5.87:0,6,35	0/1:5,0:11:0.32:20,0,0	1/1:3,4:8:16.73:102,17,0	0/1:4,4:7:0.55:54,0,1	1/1:8,7:16:10.70:160,11,0	1/1:2,0:3:6.67:21,7,0	1/1:4,6:8:17.86:128,18,0	1/1:5,2:5:4.99:28,5,0	1/1:4,0:10:10.18:29,10,0	1/1:1,4:5:11.93:87,12,0	1/1:5,3:7:10.70:70,11,0	1/1:4,11:14:0.52:167,1,0	1/1:3,0:3:3.85:11,4,0	1/1:10,1:31:39.40:127,39,0	1/1:8,9:16:2.64:171,3,0	1/1:4,8:13:22.86:159,23,0	1/1:4,4:7:12.81:89,13,0	1/1:7,6:10:8.94:66,9,0	1/1:0,4:4:8.94:65,9,0	1/1:1,0:9:16.07:47,16,0	1/1:7,0:9:8.15:24,8,0	1/1:2,3:6:5.72:35,6,0	1/1:10,6:14:2.57:149,3,0	1/1:6,8:15:0.40:96,0,0	1/1:3,6:7:16.95:115,17,0
chr10	35407674	.	A	AATAAAAAAT	10889.45	PASS	AB=0.725;AC=34;AF=0.607;AN=56;BaseQRankSum=-5.021;DP=473;FS=0.880;HRun=0;HaplotypeScore=143.0230;InbreedingCoeff=0.7505;MQ=56.91;MQ0=11;MQRankSum=-5.716;QD=45.37;ReadPosRankSum=6.425;VQSLOD=4.3492;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,103,1208	1/1:0,3:4:5.95:262,6,0	0/0:49,0:10:16.65:0,17,161	0/0:27,0:12:2.02:0,2,108	0/0:27,0:27:69.16:0,69,645	1/1:10,2:12:28.10:646,28,0	1/1:4,1:5:13.56:253,14,0	1/1:4,11:22:4.81:1033,5,0	0/0:8,0:8:23.05:0,23,149	0/1:12,2:14:17.65:487,0,18	1/1:4,0:11:11.59:331,12,0	0/0:14,0:14:29.97:0,30,321	1/1:9,1:11:33.10:891,33,0	1/1:4,0:5:15.05:254,15,0	1/1:17,0:16:44.99:1066,45,0	0/0:13,0:13:30.33:0,30,340	0/0:21,0:20:51.83:0,52,441	0/1:5,8:19:18.42:555,0,18	1/1:19,1:20:36.82:919,37,0	1/1:2,7:11:15:385,15,0	1/1:7,0:8:7.88:254,8,0	1/1:5,0:5:15.02:194,15,0	0/0:19,0:19:50.11:0,50,396	0/0:13,0:13:38.26:0,38,355	1/1:11,8:20:32.23:802,32,0	1/1:27,1:29:6.51:1052,7,0	1/1:15,1:16:45.38:821,45,0	1/1:8,1:10:27.04:684,27,0
chr10	35408735	.	CTT	C	5933.66	PASS	AB=0.918;AC=46;AF=0.821;AN=56;BaseQRankSum=-4.412;DP=571;FS=17.203;HRun=14;HaplotypeScore=90.6551;InbreedingCoeff=0.2603;MQ=72.43;MQ0=2;MQRankSum=-2.673;QD=11.37;ReadPosRankSum=4.621;VQSLOD=2.0312;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:5,3:35:41.43:41,0,91	1/1:3,8:11:14.90:133,15,0	0/0:26,0:21:33.57:0,34,341	0/0:21,0:16:9.97:0,10,60	0/1:29,0:29:31.32:143,0,31	1/1:0,13:14:26.90:297,27,0	1/1:3,13:17:32.75:289,33,0	1/1:14,14:30:29.71:324,30,0	0/1:11,0:11:7.48:48,0,7	1/1:4,18:24:53.72:480,54,0	1/1:4,18:24:30.81:264,31,0	0/1:18,0:18:4.97:89,0,5	1/1:4,3:10:23.21:168,23,0	1/1:3,9:14:11.57:141,12,0	1/1:1,7:10:10.33:140,10,0	1/1:15,0:15:27.23:129,27,0	0/1:31,0:32:6.55:177,0,7	1/1:3,17:20:41.98:388,42,0	1/1:6,15:23:28.71:389,29,0	1/1:3,13:17:26.77:294,27,0	1/1:8,13:24:23.35:238,23,0	1/1:4,10:15:20.83:241,21,0	1/1:25,0:25:14.10:129,14,0	0/1:28,0:28:99:169,0,148	1/1:0,10:11:24.01:222,24,0	1/1:10,22:35:47.20:505,47,0	1/1:6,19:26:50.73:456,51,0	1/1:0,1:3:5.70:40,6,0
chr10	35408748	.	TTC	T	3448.89	PASS	AB=1.000;AC=25;AF=0.446;AN=56;BaseQRankSum=4.033;DP=581;FS=31.858;HRun=0;HaplotypeScore=101.6803;InbreedingCoeff=0.2699;MQ=65.91;MQ0=5;MQRankSum=2.251;QD=9.20;ReadPosRankSum=9.161;VQSLOD=1.1466;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:44.77:0,45,373	0/1:10,0:10:7.77:8,0,59	0/0:18,0:13:29.84:0,30,288	0/0:15,0:9:2.73:0,3,56	1/1:2,25:27:18.85:638,19,0	0/1:18,0:18:0.90:1,0,66	0/1:21,0:21:4.94:5,0,92	0/0:31,0:29:16.62:0,17,223	1/1:2,9:11:14.99:178,15,0	0/1:26,0:26:3.06:3,0,146	0/1:27,0:27:6.11:6,0,154	1/1:3,16:18:17.13:228,17,0	0/1:10,0:10:1:1,0,34	0/1:14,0:14:8.04:8,0,34	0/0:13,0:13:11.17:0,11,118	1/1:1,14:15:33:389,33,0	1/1:13,18:31:74.95:820,75,0	0/1:21,0:21:18.30:18,0,50	0/0:21,0:21:5.58:0,6,100	0/1:20,0:20:8.38:8,0,140	0/0:21,0:21:5.97:0,6,77	0/0:22,0:21:25.95:0,26,248	1/1:2,20:22:38.29:435,38,0	1/1:15,15:30:30.59:681,31,0	0/0:20,0:20:6.61:0,7,198	0/1:30,0:30:10.56:11,0,141	0/1:23,0:23:10.31:10,0,43	0/0:5,0:5:7.84:0,8,59
chr10	35408749	.	TC	T	1751.79	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=-1.558;DP=577;FS=1.867;HRun=3;HaplotypeScore=99.5420;InbreedingCoeff=0.8919;MQ=64.26;MQ0=5;MQRankSum=1.916;QD=10.88;ReadPosRankSum=3.280;VQSLOD=1.9018;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:45.98:0,46,237	0/0:10,0:10:25.93:0,26,153	0/0:16,1:12:9.46:0,9,100	0/1:13,0:7:17.48:17,0,19	1/1:26,1:27:45:385,45,0	0/0:20,0:20:45.27:0,45,300	0/0:21,0:21:46.77:0,47,295	0/0:31,0:29:69.42:0,69,453	1/1:10,0:10:14.69:90,15,0	0/0:26,0:26:68.09:0,68,479	0/0:27,0:27:53.34:0,53,338	1/1:18,0:17:17.57:107,18,0	0/0:10,0:10:25.59:0,26,147	0/0:16,0:16:24.72:0,25,160	0/0:13,0:13:31.65:0,32,215	1/1:15,0:15:29.40:181,29,0	1/1:29,2:31:73.78:504,74,0	0/0:21,0:21:52.54:0,53,316	0/0:23,0:23:59.01:0,59,388	0/0:20,0:20:51.28:0,51,337	0/0:21,0:21:37.07:0,37,240	0/0:22,0:21:59.81:0,60,416	1/1:21,1:22:38.05:252,38,0	1/1:25,0:25:62.83:414,63,0	0/0:20,0:20:52.95:0,53,361	0/0:30,0:30:71.48:0,71,455	0/0:23,0:23:58.88:0,59,365	0/0:5,0:5:11.89:0,12,85
chr10	35409467	.	G	GTTTCA	3504.91	PASS	AB=0.758;AC=14;AF=0.250;AN=56;BaseQRankSum=-2.868;DP=663;FS=3.362;HRun=0;HaplotypeScore=160.6330;InbreedingCoeff=0.7344;MQ=72.61;MQ0=4;MQRankSum=3.534;QD=17.44;ReadPosRankSum=-0.825;VQSLOD=3.0818;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:34,0:35:99:227,0,519	0/0:14,0:14:30.09:0,30,450	0/0:40,0:26:37.44:0,37,601	0/0:64,0:36:6.45:0,6,468	1/1:8,23:34:57.16:759,57,0	0/0:21,0:21:51.07:0,51,708	0/0:21,0:21:42.13:0,42,616	0/0:28,0:28:51.14:0,51,761	1/1:2,12:14:9.03:265,9,0	0/0:22,0:22:54.07:0,54,811	0/0:7,0:7:15.05:0,15,235	1/1:16,0:16:10.83:368,11,0	0/0:16,0:16:33.08:0,33,480	0/0:17,0:17:45.15:0,45,667	0/0:19,0:19:36.12:0,36,577	1/1:2,17:20:12.04:353,12,0	0/1:2,29:32:9.74:543,0,10	0/0:17,0:17:39.09:0,39,569	0/0:20,0:20:51.17:0,51,816	0/0:27,0:27:75.23:0,75,1110	0/0:10,0:10:24.06:0,24,309	0/0:28,0:28:69.20:0,69,955	1/1:22,0:22:24.91:522,25,0	1/1:28,0:28:2.31:468,2,0	0/0:27,0:27:66.17:0,66,961	0/0:29,0:29:82.82:0,83,1290	0/0:21,0:21:51.09:0,51,685	0/0:11,0:11:24.08:0,24,379
chr10	35409481	.	C	CGTTTT	1120.41	PASS	AB=1.000;AC=7;AF=0.146;AN=48;BaseQRankSum=-6.343;DP=693;FS=18.178;HRun=0;HaplotypeScore=185.2231;InbreedingCoeff=0.3626;MQ=66.27;MQ0=7;MQRankSum=4.096;QD=7.67;ReadPosRankSum=3.692;VQSLOD=1.3740;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:16,24:42:24.08:661,24,0	0/0:17,0:17:8.85:0,9,94	./.	./.	0/1:33,0:33:78.59:79,0,208	0/0:20,0:20:18.04:0,18,191	0/0:19,0:19:3:0,3,28	./.	0/1:16,0:15:99:113,0,103	0/0:22,0:22:23.53:0,24,230	0/0:6,0:6:5.98:0,6,47	0/0:16,0:16:21.07:0,21,352	0/0:18,0:18:21.02:0,21,214	0/0:17,0:17:12.03:0,12,132	0/0:18,0:18:23.99:0,24,218	1/1:18,0:18:12.04:175,12,0	0/1:37,0:37:99:225,0,141	0/0:19,0:19:6.01:0,6,63	0/0:25,0:23:11.44:0,11,94	0/0:34,0:34:15.03:0,15,151	./.	0/0:30,0:30:20.99:0,21,188	0/0:21,0:21:18.95:0,19,299	0/0:30,0:30:51.17:0,51,797	0/0:25,0:25:30.02:0,30,287	0/0:31,0:31:10.38:0,10,225	0/0:21,0:21:18.04:0,18,187	0/0:13,0:13:9.02:0,9,96
chr10	35409522	.	GTTTTGTTTTGTT	G	15812.12	PASS	AB=0.511;AC=33;AF=0.611;AN=54;BaseQRankSum=3.886;DP=605;FS=12.398;HRun=0;HaplotypeScore=175.4686;InbreedingCoeff=0.8366;MQ=54.79;MQ0=29;MQRankSum=-4.496;QD=48.06;ReadPosRankSum=1.022;VQSLOD=3.9100;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:69.24:0,69,2388	1/1:0,15:15:24:653,24,0	0/0:14,0:1:3.01:0,3,52	0/0:25,0:2:5.50:0,6,46	0/0:32,0:32:84.29:0,84,3251	1/1:0,11:11:21.07:811,21,0	1/1:0,23:23:3.01:119,3,0	1/1:21,0:20:60.20:967,60,0	0/0:19,0:18:42.14:0,42,1694	1/1:1,26:27:78.27:1838,78,0	1/1:1,9:9:24.08:511,24,0	0/0:19,0:19:57.20:0,57,1721	1/1:0,16:16:24.38:924,24,0	1/1:0,18:18:11.49:473,11,0	1/1:1,18:19:24.08:933,24,0	0/0:17,0:17:27.56:0,28,1089	0/0:40,0:39:93.32:0,93,3169	0/1:1,22:23:32.31:228,0,32	1/1:2,13:13:39.06:844,39,0	1/1:0,29:29:78.27:1885,78,0	./.	1/1:1,26:27:63.13:1525,63,0	0/0:19,0:19:57.20:0,57,1651	0/0:35,0:34:99:0,100,3172	1/1:0,20:20:30.10:1178,30,0	1/1:3,23:25:72.25:1760,72,0	1/1:0,15:15:21.07:807,21,0	1/1:1,13:13:9.03:356,9,0
chr10	35409532	.	GTT	G	8016.82	PASS	AB=1.000;AC=33;AF=0.611;AN=54;BaseQRankSum=10.828;DP=604;FS=12.233;HRun=4;HaplotypeScore=123.7497;InbreedingCoeff=0.8764;MQ=54.19;MQ0=27;MQRankSum=-4.853;QD=24.15;ReadPosRankSum=0.527;VQSLOD=2.5298;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:42:72.19:0,72,1126	1/1:15,0:15:23.90:334,24,0	0/0:17,0:3:9.03:0,9,140	0/0:28,0:5:14.54:0,15,199	0/0:28,0:28:66.23:0,66,1211	1/1:11,0:11:21.05:229,21,0	1/1:23,0:23:3.01:30,3,0	1/1:1,25:25:75.25:1183,75,0	0/0:19,0:19:51.15:0,51,898	1/1:26,1:27:75.19:1083,75,0	1/1:9,0:9:24.08:355,24,0	0/0:18,0:18:54.11:0,54,915	1/1:16,0:16:23.85:283,24,0	1/1:18,0:18:11.70:120,12,0	1/1:18,0:18:24.06:280,24,0	0/0:16,0:16:36.12:0,36,641	0/0:37,0:36:99:0,102,1811	0/1:23,0:23:9.93:51,0,10	1/1:14,1:13:36.04:462,36,0	1/1:29,0:29:78.24:1152,78,0	./.	1/1:27,0:27:63.10:875,63,0	0/0:18,0:18:52.24:0,52,878	0/0:35,0:34:97.08:0,97,1481	1/1:20,0:20:30.06:314,30,0	1/1:24,2:25:66.20:938,66,0	1/1:15,0:15:20.80:237,21,0	1/1:14,0:13:9.02:90,9,0
chr10	35410551	.	AACACACACACACAC	A	1921.30	PASS	AB=0.824;AC=27;AF=0.614;AN=44;BaseQRankSum=2.477;DP=473;FS=0.953;HRun=0;HaplotypeScore=178.0393;InbreedingCoeff=0.5556;MQ=68.43;MQ0=14;MQRankSum=-1.440;QD=9.37;ReadPosRankSum=0.204;VQSLOD=2.5044;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:30:18.06:0,18,813	1/1:2,5:8:19.31:515,19,0	./.	0/0:49,0:32:5.96:0,6,43	0/0:12,0:12:2.99:0,3,24	./.	1/1:19,0:19:6:103,6,0	0/0:25,0:25:3.86:0,4,23	./.	1/1:13,2:12:9.03:305,9,0	1/1:10,0:10:8.05:85,8,0	./.	1/1:10,2:11:3.01:74,3,0	./.	1/1:15,5:20:6.02:206,6,0	0/0:9,0:12:6.16:0,6,138	0/0:15,0:17:21.04:0,21,417	0/1:11,1:13:18.76:19,0,195	1/1:14,0:14:0.89:18,1,0	1/1:14,3:17:5.97:64,6,0	1/1:21,0:19:1.24:3,1,0	1/1:14,4:18:6.01:64,6,0	0/0:19,0:20:26.90:0,27,373	0/0:25,0:29:8.93:0,9,97	./.	1/1:19,1:20:9.01:177,9,0	1/1:12,1:12:7.43:209,7,0	1/1:1,2:3:6.02:235,6,0
chr10	35410604	.	GGACAGACAGACA	G	6768.77	PASS	AB=0.734;AC=36;AF=0.643;AN=56;BaseQRankSum=-0.481;DP=488;FS=20.555;HRun=0;HaplotypeScore=182.0880;InbreedingCoeff=0.4416;MQ=45.79;MQ0=15;MQRankSum=-3.146;QD=21.98;ReadPosRankSum=3.896;VQSLOD=2.7042;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:13,1:22:33.61:34,0,124	1/1:4,8:12:12.04:370,12,0	0/0:29,0:9:13.69:0,14,751	0/0:40,0:14:30.46:0,30,1142	0/0:3,0:15:6.78:0,7,52	1/1:0,6:6:9.03:220,9,0	1/1:7,6:12:5.81:117,6,0	0/1:11,1:9:53.88:67,0,54	0/0:7,0:13:11.66:0,12,83	1/1:7,9:15:30.10:1029,30,0	1/1:1,7:8:2.97:20,3,0	0/0:4,1:18:1.61:0,2,24	1/1:5,10:15:8.81:284,9,0	1/1:5,11:16:3.01:58,3,0	1/1:6,10:16:18.06:416,18,0	0/0:4,0:15:2.97:0,3,38	0/1:7,0:22:3.23:3,0,85	0/1:12,7:18:99:608,0,128	1/1:8,7:13:24.08:704,24,0	1/1:3,15:18:11.95:189,12,0	1/1:12,10:19:6.02:169,6,0	1/1:12,9:21:5.93:40,6,0	0/0:2,0:11:2.73:0,3,16	0/0:17,0:38:4.28:0,4,27	1/1:4,12:16:12.04:186,12,0	1/1:3,18:21:51.17:1698,51,0	1/1:2,11:13:12.04:347,12,0	1/1:1,2:3:6.02:210,6,0
chr10	35410761	.	T	TGAGAGAGA	1921.89	PASS	AB=0.919;AC=37;AF=0.804;AN=46;BaseQRankSum=-1.572;DP=286;FS=0.000;HRun=0;HaplotypeScore=115.2299;InbreedingCoeff=0.0738;MQ=30.52;MQ0=42;MQRankSum=-1.669;QD=8.78;ReadPosRankSum=0.314;VQSLOD=1.8319;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:11:2.22:0,2,7	1/1:3,2:5:5.98:58,6,0	./.	./.	1/1:13,0:12:1.86:23,2,0	1/1:11,2:8:3.01:75,3,0	1/1:16,0:11:2.80:16,3,0	1/1:21,0:15:8.66:52,9,0	./.	1/1:12,3:15:19.62:577,20,0	1/1:8,2:9:3.01:113,3,0	0/0:5,0:5:0.14:0,0,0	1/1:10,0:7:3.90:97,4,0	./.	1/1:13,0:9:3.01:50,3,0	1/1:3,0:7:9.03:198,9,0	1/1:3,0:5:6.02:133,6,0	1/1:9,0:8:10.58:149,11,0	0/1:8,0:9:40.17:40,0,64	0/1:12,0:12:18.47:18,0,29	1/1:5,0:1:3:25,3,0	./.	0/0:20,0:17:3.01:0,3,74	1/1:9,0:6:0.47:1,0,0	1/1:17,0:16:5.40:142,5,0	0/1:12,0:11:90.66:121,0,91	1/1:7,0:8:3.01:47,3,0	1/1:3,0:1:3.01:100,3,0
chr10	35411498	.	AT	A	8043.28	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-2.858;DP=509;FS=1.175;HRun=7;HaplotypeScore=61.6008;InbreedingCoeff=0.9604;MQ=67.86;MQ0=0;MQRankSum=-1.162;QD=24.67;ReadPosRankSum=-0.266;VQSLOD=5.0784;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,111,1347	1/1:1,11:12:24.05:245,24,0	0/0:6,0:6:9.02:0,9,96	0/0:3,0:3:6.01:0,6,59	0/0:24,0:24:69.15:0,69,824	1/1:2,19:21:57.13:582,57,0	1/1:1,16:17:39.09:398,39,0	1/1:5,32:37:96.19:971,96,0	0/0:17,0:17:45.14:0,45,557	1/1:2,23:25:69.10:686,69,0	1/1:3,12:15:33.07:337,33,0	0/0:13,0:13:30.10:0,30,377	1/1:2,9:11:27.06:275,27,0	1/1:2,8:10:18.04:183,18,0	1/1:3,19:22:54.12:551,54,0	0/0:17,0:17:51.15:0,51,629	0/0:19,0:19:48.14:0,48,591	1/1:3,15:18:42.09:428,42,0	1/1:2,17:18:48.07:471,48,0	1/1:5,19:24:60:597,60,0	1/1:2,10:12:27.06:275,27,0	1/1:0,5:5:9.02:92,9,0	0/0:31,0:31:81.26:0,81,1019	0/0:14,0:14:42.13:0,42,527	1/1:1,6:7:12.03:122,12,0	1/1:5,24:29:72.14:728,72,0	1/1:2,24:26:69.16:704,69,0	1/1:2,14:16:39.09:398,39,0
chr10	35412442	.	A	AGTCCTCC	2255.71	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=1.128;DP=488;FS=2.796;HRun=0;HaplotypeScore=117.5847;InbreedingCoeff=0.9524;MQ=53.44;MQ0=6;MQRankSum=-7.614;QD=75.19;ReadPosRankSum=-0.654;VQSLOD=3.6346;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,21:30:72.41:2351,72,0	0/0:4,0:4:12.04:0,12,328	0/0:29,0:6:18.05:0,18,378	0/0:25,0:9:18.06:0,18,474	0/0:20,0:20:51.18:0,51,1425	0/0:15,0:15:42.11:0,42,1051	0/0:16,0:15:42.14:0,42,1125	0/0:23,0:23:66.20:0,66,1537	0/0:13,0:13:36.11:0,36,909	0/0:17,0:16:48.16:0,48,1243	0/0:16,0:15:45.14:0,45,1129	0/0:16,0:16:42.14:0,42,1108	0/0:13,0:13:36.11:0,36,901	0/0:16,0:16:42.14:0,42,1119	0/0:18,0:18:51.14:0,51,1258	0/0:13,0:13:39.12:0,39,1028	0/0:18,0:17:51.15:0,51,1362	0/0:25,0:25:75.19:0,75,1983	0/0:20,0:18:48.16:0,48,1300	0/0:9,0:9:24.08:0,24,656	0/0:19,0:19:39.11:0,39,1008	0/0:12,0:12:30.10:0,30,804	0/0:14,0:14:39.06:0,39,906	0/0:18,0:18:39.09:0,39,967	0/0:16,0:16:39.13:0,39,1012	0/0:17,0:17:51.16:0,51,1366	0/0:20,0:20:54.17:0,54,1444	0/0:16,0:16:45.15:0,45,1255
chr10	35412476	.	T	TG	1978.59	PASS	AB=0.766;AC=26;AF=0.481;AN=54;BaseQRankSum=-1.990;DP=464;FS=3.447;HRun=3;HaplotypeScore=114.8044;InbreedingCoeff=-0.0340;MQ=70.16;MQ0=2;MQRankSum=-3.709;QD=6.18;ReadPosRankSum=-1.341;VQSLOD=0.0388;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:24,1:27:11.23:123,11,0	0/1:3,4:7:6.01:50,0,6	0/0:20,0:16:45.05:0,45,514	0/0:27,0:28:34.04:0,34,710	0/0:16,0:15:2.11:0,2,17	0/1:13,4:17:26.58:92,0,27	0/1:11,13:23:19.94:190,0,20	1/1:10,6:17:0.15:92,0,0	0/0:8,0:8:6.51:0,7,18	0/0:13,1:14:7.72:0,8,42	0/1:14,1:14:24.97:50,0,25	0/0:12,0:12:4.30:0,4,12	1/1:9,4:13:6.02:70,6,0	1/1:14,5:19:1.03:143,1,0	1/1:5,11:16:3.04:167,3,0	0/1:13,0:13:12.26:32,0,12	0/0:21,0:20:21.71:0,22,61	0/1:11,20:31:1.26:372,0,1	0/1:13,3:16:13.08:108,0,13	0/1:8,3:11:7.81:29,0,8	0/1:12,10:22:14.98:95,0,15	0/1:12,3:15:32.74:80,0,33	./.	0/0:17,0:17:4.32:0,4,11	0/1:11,6:17:27.58:90,0,28	1/1:11,1:11:6.31:54,6,0	1/1:10,8:18:2.10:166,2,0	0/1:5,5:10:0.91:131,0,1
chr10	35412479	.	GC	G	4217.83	PASS	AB=1.000;AC=51;AF=0.911;AN=56;BaseQRankSum=0.764;DP=411;FS=0.000;HRun=1;HaplotypeScore=66.3533;InbreedingCoeff=0.5123;MQ=73.70;MQ0=0;MQRankSum=-3.329;QD=11.62;ReadPosRankSum=-3.875;VQSLOD=1.5386;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:21:34.94:200,35,0	1/1:7,0:7:5.99:60,6,0	0/0:18,0:17:40.55:0,41,563	0/0:29,1:29:62.42:0,62,913	1/1:11,4:14:27.44:209,27,0	1/1:14,0:14:10.05:127,10,0	1/1:22,1:23:20.03:227,20,0	1/1:19,0:19:32.30:257,32,0	1/1:4,4:8:18:161,18,0	1/1:14,0:14:6.69:153,7,0	1/1:11,0:11:5.52:121,6,0	1/1:0,13:13:11.90:115,12,0	1/1:10,0:10:14.92:122,15,0	1/1:15,1:16:23.44:196,23,0	1/1:14,0:14:13.23:106,13,0	1/1:7,7:14:37.20:307,37,0	1/1:7,14:21:55.23:483,55,0	1/1:27,0:27:26.37:206,26,0	1/1:16,0:16:24.66:226,25,0	1/1:8,0:8:4.40:53,4,0	1/1:18,0:18:10.29:116,10,0	0/1:15,0:15:11.89:85,0,12	1/1:0,4:4:2.97:20,3,0	1/1:0,13:13:14.98:162,15,0	1/1:13,0:13:4.50:104,4,0	1/1:11,0:10:26.86:221,27,0	1/1:12,0:12:15.52:125,16,0	1/1:6,0:6:6.64:58,7,0
chr10	35412485	.	GGA	G	1383.42	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=1.350;DP=404;FS=2.750;HRun=0;HaplotypeScore=79.9107;InbreedingCoeff=0.9440;MQ=77.46;MQ0=0;MQRankSum=-1.864;QD=15.54;ReadPosRankSum=1.004;VQSLOD=3.6009;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:50.49:0,50,527	0/0:8,0:8:18.03:0,18,229	0/0:19,0:18:41.71:0,42,718	0/0:32,0:31:74.17:0,74,1150	1/1:12,0:11:25.22:231,25,0	0/0:13,0:13:35.85:0,36,480	0/0:21,0:21:42.06:0,42,483	0/0:19,0:19:44.13:0,44,479	1/1:6,2:8:14.53:156,15,0	0/0:12,0:12:30.02:0,30,388	0/0:9,0:9:21.67:0,22,281	1/1:16,0:16:12.65:94,13,0	0/0:9,0:9:14.76:0,15,158	0/0:15,0:15:33.05:0,33,391	0/0:16,0:16:30.04:0,30,331	1/1:13,0:13:33.04:380,33,0	1/1:18,3:20:54.07:633,54,0	0/0:28,0:28:56.15:0,56,547	0/0:17,0:17:48.11:0,48,598	0/0:10,0:10:24.02:0,24,289	0/0:19,0:19:36.06:0,36,444	0/0:12,0:12:32.34:0,32,444	1/1:5,0:5:5:26,5,0	1/1:14,0:14:8.63:53,9,0	0/0:11,0:11:24.02:0,24,310	0/0:7,0:6:15.03:0,15,167	0/0:10,0:10:26.54:0,27,289	0/0:6,0:6:15.03:0,15,170
chr10	35412486	.	GA	G	1280.72	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=1.821;DP=392;FS=4.256;HRun=1;HaplotypeScore=72.0779;InbreedingCoeff=0.9570;MQ=79.35;MQ0=0;MQRankSum=-0.624;QD=14.89;ReadPosRankSum=1.477;VQSLOD=3.3954;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:49.02:0,49,392	0/0:8,0:8:17.33:0,17,162	0/0:17,0:17:24.12:0,24,553	0/0:31,0:30:77.59:0,78,953	1/1:7,4:10:26.16:218,26,0	0/0:13,0:13:24.91:0,25,351	0/0:20,0:20:41.16:0,41,342	0/0:18,0:18:45.16:0,45,404	1/1:6,2:8:15.54:134,16,0	0/0:12,0:12:27.51:0,28,301	0/0:9,0:9:21.78:0,22,194	1/1:14,1:15:19.79:175,20,0	0/0:9,0:9:14.68:0,15,111	0/0:15,0:15:26.75:0,27,245	0/0:16,0:16:29.61:0,30,247	1/1:5,7:12:32.95:280,33,0	1/1:9,11:19:53.93:462,54,0	0/0:26,0:26:43.77:0,44,334	0/0:16,0:16:47.28:0,47,460	0/0:10,0:10:23.93:0,24,237	0/0:20,0:20:41.55:0,42,350	0/0:11,0:11:32.78:0,33,314	1/1:6,0:6:5:26,5,0	1/1:14,0:14:17.93:179,18,0	0/0:12,0:12:23.11:0,23,224	0/0:7,0:6:14.98:0,15,130	0/0:10,0:10:20.72:0,21,184	0/0:6,0:6:14.62:0,15,110
chr10	35413433	.	A	AT	1175.46	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-7.482;DP=643;FS=7.121;HRun=4;HaplotypeScore=67.5015;InbreedingCoeff=0.9938;MQ=66.62;MQ0=0;MQRankSum=4.429;QD=32.65;ReadPosRankSum=-0.206;VQSLOD=3.9916;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,31:36:93.31:1270,93,0	0/0:7,0:7:21.06:0,21,238	0/0:18,0:18:42.08:0,42,446	0/0:15,0:15:39.07:0,39,424	0/0:19,0:19:54.11:0,54,597	0/0:26,0:26:78.22:0,78,881	0/0:26,0:26:77.88:0,78,851	0/0:29,0:29:78.20:0,78,874	0/0:26,0:26:75.20:0,75,840	0/0:40,0:40:99:0,114,1280	0/0:23,0:23:63.03:0,63,668	0/0:28,0:28:81.23:0,81,918	0/0:28,0:28:81.19:0,81,903	0/0:19,0:19:57.09:0,57,625	0/0:28,0:28:84.07:0,84,917	0/0:19,0:19:54.15:0,54,609	0/0:21,0:21:60.13:0,60,666	0/0:20,0:20:54.11:0,54,589	0/0:20,0:20:60.17:0,60,681	0/0:15,0:15:42.12:0,42,474	0/0:26,0:26:75.20:0,75,840	0/0:22,0:22:63:0,63,660	0/0:23,0:23:68.92:0,69,748	0/0:25,0:25:72.06:0,72,762	0/0:20,0:20:54.15:0,54,610	0/0:20,0:20:60.17:0,60,680	0/0:33,0:32:99:0,99,1117	0/0:11,0:11:24:0,24,246
chr10	35413990	.	G	GCA	5763.36	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-14.273;DP=686;FS=3.371;HRun=0;HaplotypeScore=106.8318;InbreedingCoeff=0.9815;MQ=76.27;MQ0=5;MQRankSum=-0.126;QD=33.31;ReadPosRankSum=3.497;VQSLOD=7.3931;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:60,0:60:99:0,126,1545	0/0:7,0:7:21.07:0,21,265	0/0:27,0:27:43.74:0,44,533	0/0:26,0:26:27.47:0,27,535	1/1:2,12:13:33.11:535,33,0	0/0:26,0:26:60.19:0,60,756	0/0:23,0:24:50.98:0,51,605	0/0:21,0:21:39.12:0,39,492	1/1:4,31:36:69.24:1146,69,0	0/0:17,0:17:48.15:0,48,594	0/0:12,0:12:30.08:0,30,364	1/1:5,21:25:7.18:659,7,0	0/0:15,0:15:42.12:0,42,515	0/0:30,0:30:78.25:0,78,975	0/0:38,0:38:96.26:0,96,1184	1/1:2,11:13:27.09:448,27,0	1/1:5,26:31:75.26:1246,75,0	0/0:25,0:25:66.17:0,66,813	0/0:19,0:19:42.09:0,42,499	0/0:8,0:8:18.05:0,18,215	0/0:40,0:40:99:0,102,1179	0/0:15,0:15:42.13:0,42,529	1/1:4,10:14:24.08:383,24,0	1/1:4,35:36:81.28:1346,81,0	0/0:21,0:21:51.16:0,51,643	0/0:23,0:23:66.19:0,66,804	0/0:30,0:30:77.85:0,78,896	0/0:28,0:28:72.21:0,72,887
chr10	35414044	.	C	CT	1791.61	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.432;DP=560;FS=2.847;HRun=1;HaplotypeScore=70.1624;InbreedingCoeff=0.8762;MQ=89.63;MQ0=3;MQRankSum=-3.458;QD=35.83;ReadPosRankSum=2.632;VQSLOD=4.0375;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,50:50:99:1886,126,0	0/0:5,0:5:12.04:0,12,156	0/0:19,0:19:54.14:0,54,660	0/0:29,0:29:75.16:0,75,908	0/0:12,0:12:33.11:0,33,428	0/0:25,0:25:66.20:0,66,842	0/0:25,0:25:72.23:0,72,932	0/0:31,0:30:81.25:0,81,1027	0/0:22,0:22:54.16:0,54,681	0/0:21,0:21:60.19:0,60,779	0/0:11,0:11:33.11:0,33,428	0/0:12,0:12:27.09:0,27,350	0/0:11,0:11:33.11:0,33,424	0/0:10,0:10:27.04:0,27,330	0/0:27,0:27:81.07:0,81,963	0/0:11,0:11:30.10:0,30,389	0/0:27,0:27:72.22:0,72,918	0/0:24,0:24:66.14:0,66,817	0/0:15,0:15:45.13:0,45,568	0/0:2,0:2:6.02:0,6,78	0/0:41,0:41:99:0,111,1427	0/0:12,0:12:36.12:0,36,460	0/0:8,0:8:24.06:0,24,296	0/0:39,0:36:90.22:0,90,1117	0/0:14,0:14:42.11:0,42,517	0/0:16,0:16:48.15:0,48,610	0/0:26,0:25:72.23:0,72,927	0/0:15,0:15:42.11:0,42,526
chr10	35414421	.	CAGACA	C	863.77	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.980;DP=617;FS=10.875;HRun=0;HaplotypeScore=111.8108;InbreedingCoeff=0.9867;MQ=84.60;MQ0=0;MQRankSum=-6.904;QD=25.40;ReadPosRankSum=0.760;VQSLOD=2.7344;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,25:34:50.64:959,51,0	0/0:10,0:10:30.10:0,30,911	0/0:23,0:23:57.19:0,57,1590	0/0:24,0:24:63.19:0,63,1807	0/0:19,0:19:54.63:0,55,1505	0/0:24,0:24:66.18:0,66,1878	0/0:18,0:18:54.17:0,54,1573	0/0:27,0:27:78.27:0,78,2306	0/0:27,0:27:81.28:0,81,2489	0/0:17,0:17:51.16:0,51,1515	0/0:10,0:10:30.10:0,30,928	0/0:22,0:22:63.20:0,63,1875	0/0:18,0:18:48.15:0,48,1399	0/0:21,0:21:57.20:0,57,1722	0/0:13,0:13:39.13:0,39,1208	0/0:13,0:13:39.13:0,39,1209	0/0:43,0:43:99:0,126,3865	0/0:35,0:35:93.32:0,93,2884	0/0:18,0:18:54.14:0,54,1428	0/0:16,0:16:48.16:0,48,1453	0/0:69,0:69:99:0,187,5547	0/0:13,0:13:39.13:0,39,1163	0/0:7,0:7:18.06:0,18,555	0/0:31,0:31:84.29:0,84,2564	0/0:12,0:12:33.11:0,33,1020	0/0:26,0:26:72.25:0,72,2065	0/0:20,0:20:60.16:0,60,1697	0/0:7,0:7:21.07:0,21,651
chr10	35415370	.	C	CGTGT	5920.43	PASS	AB=0.630;AC=43;AF=0.796;AN=54;BaseQRankSum=-3.947;DP=719;FS=4.050;HRun=0;HaplotypeScore=164.2385;InbreedingCoeff=0.7132;MQ=63.54;MQ0=7;MQRankSum=-1.722;QD=10.65;ReadPosRankSum=-3.974;VQSLOD=3.6184;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:37,0:38:17.63:109,18,0	1/1:7,4:11:4.83:174,5,0	0/0:26,0:19:3:0,3,27	./.	0/0:14,0:24:21.02:0,21,193	1/1:9,15:26:15.05:356,15,0	1/1:38,0:37:26.20:742,26,0	1/1:19,0:17:11.95:108,12,0	0/0:15,0:22:15.49:0,15,140	1/1:35,0:35:56.55:703,57,0	0/1:7,8:17:33.52:65,0,34	1/1:20,3:33:8.91:108,9,0	1/1:8,6:15:8.77:214,9,0	1/1:7,10:21:11.51:168,12,0	1/1:8,15:24:11.47:226,11,0	0/0:12,0:25:31.43:0,31,269	0/0:22,0:35:37.82:0,38,479	1/1:9,8:19:17.42:219,17,0	1/1:27,0:27:35.39:345,35,0	1/1:18,0:20:23.52:323,24,0	1/1:37,0:54:26.78:344,27,0	1/1:8,10:19:12.04:286,12,0	1/1:17,0:17:8.77:74,9,0	1/1:30,0:29:20.98:226,21,0	1/1:8,10:19:9.03:214,9,0	1/1:31,0:30:28.85:372,29,0	1/1:13,5:18:4.71:95,5,0	1/1:18,1:19:29.55:450,30,0
chr10	35415403	.	GTC	G	319.38	PASS	AB=0.978;AC=9;AF=0.161;AN=56;BaseQRankSum=0.738;DP=680;FS=1.656;HRun=0;HaplotypeScore=138.4783;InbreedingCoeff=0.0229;MQ=50.01;MQ0=21;MQRankSum=1.134;QD=1.83;ReadPosRankSum=-1.030;VQSLOD=2.2308;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:7,23:30:14.72:94,15,0	0/1:10,1:11:2.45:2,0,165	0/0:33,0:15:20.95:0,21,206	0/0:27,0:10:14.82:0,15,136	0/1:17,0:17:50.96:51,0,67	0/0:22,0:22:27:0,27,252	0/0:36,1:36:5.63:0,6,421	0/0:24,0:14:3.63:0,4,238	0/1:14,0:12:27.48:41,0,27	0/0:26,0:26:20.04:0,20,517	0/0:15,0:15:14.98:0,15,163	0/0:33,0:32:38.84:0,39,259	0/0:9,0:9:5.98:0,6,120	0/0:25,0:25:41.15:0,41,365	0/1:22,0:21:20.52:21,0,237	0/1:25,2:27:99:143,0,118	0/1:37,0:37:93.03:93,0,193	0/0:17,0:17:23.69:0,24,264	0/0:31,1:28:7.45:0,7,400	0/1:17,0:17:12.59:13,0,268	0/0:50,0:49:57.71:0,58,471	0/0:20,0:20:33.01:0,33,314	0/0:18,0:18:21.64:0,22,169	0/0:28,0:27:2.18:0,2,194	0/0:19,0:19:35.57:0,36,334	0/0:29,0:26:48.23:0,48,545	0/0:22,0:21:41.73:0,42,339	0/0:17,2:19:17.72:0,18,301
chr10	35415502	.	CTGTGTGTGTGTGTGTGTGTGTGTGTG	C	1546.64	PASS	AB=0.867;AC=11;AF=0.229;AN=48;BaseQRankSum=4.453;DP=515;FS=15.115;HRun=0;HaplotypeScore=260.1537;InbreedingCoeff=0.1440;MQ=37.63;MQ0=55;MQRankSum=-3.680;QD=10.82;ReadPosRankSum=-2.350;VQSLOD=0.9443;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:64,0:56:6.91:0,7,168	./.	./.	./.	0/0:20,0:21:20.34:0,20,853	0/1:16,6:18:57.51:183,0,58	0/0:21,0:12:0.89:0,1,2	0/0:14,0:8:0:0,0,0	0/0:21,0:16:15.03:0,15,434	0/1:21,1:22:10.25:320,0,10	1/1:7,1:5:0.89:2,1,0	0/0:28,0:26:20.77:0,21,1195	0/1:13,0:15:13.18:329,0,13	0/0:11,1:11:1.98:0,2,16	0/0:15,2:16:2.22:0,2,7	0/0:19,0:18:12.04:0,12,695	0/0:23,0:16:24.08:0,24,1223	0/0:7,0:6:10.25:0,10,90	1/1:18,1:17:2.56:50,3,0	0/0:12,0:11:0:0,0,0	0/0:20,0:11:3.41:0,3,19	0/0:16,4:18:5.59:0,6,65	./.	0/0:28,0:25:20.41:0,20,973	0/0:13,1:14:1.55:0,2,4	0/1:22,2:22:82.59:205,0,83	0/1:21,4:24:48.31:380,0,48	1/1:6,0:3:3.01:199,3,0
chr10	35417430	.	C	CTTGTGGACATGATCCAA	60509.76	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-3.076;DP=552;FS=6.744;HRun=0;HaplotypeScore=226.8553;InbreedingCoeff=0.9913;MQ=98.12;MQ0=0;MQRankSum=-18.704;QD=186.18;ReadPosRankSum=2.259;VQSLOD=4.5478;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:9,5:17:39.05:2087,39,0	1/1:4,7:12:33.07:2389,33,0	0/0:32,0:32:96.22:0,96,3674	0/0:37,0:37:99:0,108,4296	0/0:25,0:25:72.25:0,72,3369	1/1:9,9:22:54.18:4057,54,0	1/1:10,1:13:33.04:1525,33,0	1/1:23,0:23:66.22:3832,66,0	0/0:19,0:19:57.20:0,57,2871	1/1:4,11:18:57.18:4029,57,0	1/1:6,16:22:60.21:4877,60,0	0/0:27,0:27:81.28:0,81,3537	1/1:10,8:19:54.19:3541,54,0	1/1:8,4:16:36.08:2293,36,0	1/1:2,16:21:54.19:4587,54,0	0/0:22,0:22:60.21:0,60,2975	0/0:26,0:26:75.23:0,75,3330	1/1:0,4:5:12.04:1021,12,0	1/1:13,4:20:54.08:2637,54,0	1/1:6,14:21:57.20:4614,57,0	1/1:5,0:5:14.99:539,15,0	1/1:5,13:19:57.11:4257,57,0	0/0:22,0:22:66.21:0,66,3141	0/0:17,0:17:51.13:0,51,2370	1/1:4,12:18:48.12:3843,48,0	1/1:8,14:23:66.23:4710,66,0	1/1:13,5:22:54.19:4341,54,0	1/1:1,5:8:18.06:1332,18,0
chr10	35418781	.	T	TTC	2003.16	PASS	AB=1.000;AC=50;AF=0.962;AN=52;BaseQRankSum=-2.390;DP=601;FS=5.312;HRun=0;HaplotypeScore=164.7117;InbreedingCoeff=0.0791;MQ=64.96;MQ0=11;MQRankSum=0.628;QD=3.66;ReadPosRankSum=-0.481;VQSLOD=2.6305;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:34,0:31:3.97:26,4,0	1/1:14,0:14:6.02:77,6,0	0/1:40,0:22:0:0,0,0	./.	1/1:4,3:7:9.03:135,9,0	1/1:22,0:22:5.98:66,6,0	1/1:24,0:23:5.22:33,5,0	1/1:25,0:25:14.93:102,15,0	1/1:10,4:14:9.03:134,9,0	1/1:23,0:23:26.77:210,27,0	./.	1/1:17,0:16:16.91:106,17,0	1/1:24,0:24:9.81:125,10,0	1/1:17,0:16:1.34:4,1,0	1/1:23,0:20:11.98:112,12,0	1/1:15,0:26:5.98:53,6,0	1/1:17,11:29:18.06:270,18,0	1/1:14,0:11:11.38:65,11,0	1/1:17,0:16:9.84:64,10,0	1/1:11,0:11:2.98:21,3,0	1/1:29,0:29:2.98:21,3,0	1/1:25,0:23:2.37:8,2,0	1/1:11,0:11:6.02:78,6,0	1/1:30,0:30:14.10:102,14,0	1/1:14,0:14:2.97:20,3,0	1/1:16,0:15:10.09:70,10,0	1/1:18,0:18:8.51:55,9,0	0/1:23,0:22:11.44:130,0,11
chr10	35421390	.	T	TAC	561.50	PASS	AB=0.976;AC=12;AF=0.300;AN=40;BaseQRankSum=4.019;DP=915;FS=15.833;HRun=0;HaplotypeScore=147.9003;InbreedingCoeff=-0.1995;MQ=24.10;MQ0=63;MQRankSum=-4.603;QD=1.22;ReadPosRankSum=5.843;VQSLOD=1.3395;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:45,1:34:4:30,4,0	0/0:5,0:2:3.01:0,3,37	./.	./.	./.	0/0:21,0:18:2.74:0,3,12	./.	0/1:63,1:12:24.81:119,0,25	0/0:37,1:28:15.47:0,15,181	0/1:69,2:43:99:193,0,249	./.	0/0:45,0:26:5.61:0,6,77	0/1:42,2:30:9.95:10,0,28	./.	1/1:52,2:39:0.89:2,1,0	0/1:37,0:22:9.32:9,0,86	0/0:26,0:22:11.09:0,11,265	0/1:29,1:23:89.10:89,0,102	0/1:29,0:10:40.01:40,0,47	./.	0/0:66,4:49:10.26:0,10,106	0/0:23,0:12:3:0,3,25	0/0:34,1:28:9.67:0,10,124	0/0:44,2:28:5.95:0,6,78	0/0:12,0:10:2.97:0,3,20	0/1:55,0:29:99:119,0,209	0/1:23,0:18:68.63:69,0,94	./.
chr10	35421394	.	CACAT	C	425.59	PASS	AB=0.995;AC=14;AF=0.318;AN=44;BaseQRankSum=2.891;DP=984;FS=25.861;HRun=0;HaplotypeScore=169.7211;InbreedingCoeff=0.0721;MQ=24.35;MQ0=69;MQRankSum=-5.317;QD=0.91;ReadPosRankSum=4.840;VQSLOD=0.8533;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:47,1:37:0.10:0,0,3	0/0:5,0:2:3.01:0,3,59	./.	./.	./.	1/1:22,0:19:2.60:10,3,0	1/1:44,1:21:0.47:1,0,0	1/1:68,0:12:9.59:223,10,0	0/0:41,0:30:15.76:0,16,344	0/1:77,1:47:99:127,0,540	./.	0/0:52,0:33:2.15:0,2,235	0/0:47,0:31:1.62:0,2,68	./.	1/1:58,0:42:1.82:5,2,0	0/0:39,1:23:16.29:0,16,275	0/0:28,1:25:18.60:0,19,564	0/1:32,0:24:36.97:37,0,266	0/1:31,0:10:13:13,0,148	./.	0/0:83,0:58:10.70:0,11,233	0/0:26,0:15:3.01:0,3,73	0/0:34,2:28:9.03:0,9,273	0/0:48,0:29:6.02:0,6,152	0/0:14,0:12:2.96:0,3,51	0/1:59,0:31:62.51:63,0,522	0/1:23,0:18:68.22:68,0,206	0/0:4,0:4:1.82:0,2,5
chr10	35421396	.	CAT	C	271.84	PASS	AB=0.970;AC=10;AF=0.217;AN=46;BaseQRankSum=2.956;DP=1032;FS=19.502;HRun=0;HaplotypeScore=173.5108;InbreedingCoeff=-0.1679;MQ=24.58;MQ0=82;MQRankSum=-5.379;QD=0.57;ReadPosRankSum=3.900;VQSLOD=1.3611;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:46,2:40:17.91:35,0,18	0/0:5,0:2:3.01:0,3,55	./.	./.	./.	0/0:22,1:20:0.74:0,1,2	0/0:42,6:23:0:0,0,0	0/1:70,7:12:17.39:96,0,17	0/0:41,1:31:18.76:0,19,314	0/1:80,1:49:63.82:64,0,531	./.	0/1:54,0:34:1.33:1,0,175	0/0:45,2:30:1.38:0,1,56	./.	1/1:55,4:43:1.82:5,2,0	0/0:39,1:23:5.51:0,6,191	0/0:27,2:25:22.39:0,22,432	0/1:34,1:26:33.13:33,0,295	0/1:33,1:10:60.12:60,0,113	0/0:16,0:14:3:0,3,25	0/0:84,3:61:13.16:0,13,200	0/0:28,0:16:3.01:0,3,58	0/0:38,0:30:8.51:0,9,247	0/0:51,0:33:12:0,12,163	0/0:15,0:12:2.97:0,3,54	0/1:56,3:32:66.16:66,0,449	0/1:23,0:18:26.94:27,0,158	0/0:5,0:5:4.81:0,5,30
chr10	35421398	.	T	TAC	572.94	PASS	AB=0.948;AC=13;AF=0.283;AN=46;BaseQRankSum=6.487;DP=1060;FS=19.726;HRun=0;HaplotypeScore=182.7712;InbreedingCoeff=-0.2306;MQ=24.59;MQ0=87;MQRankSum=-6.701;QD=0.90;ReadPosRankSum=1.757;VQSLOD=1.5322;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:48,3:41:13.35:13,0,32	0/0:5,0:2:3:0,3,25	./.	./.	./.	0/0:19,4:20:2.74:0,3,12	0/0:49,0:23:0.47:0,0,1	0/1:78,1:13:4.24:124,0,4	0/0:39,4:31:18.93:0,19,226	0/1:80,4:50:99:199,0,304	./.	0/0:53,0:34:6.66:0,7,150	0/1:44,2:30:6.61:7,0,12	./.	1/1:51,8:44:0.47:1,0,0	0/0:40,1:24:15.03:0,15,188	0/1:25,2:25:3.87:4,0,288	0/1:33,1:26:76.95:77,0,140	0/1:36,0:11:2.60:3,0,69	0/0:17,0:15:3.01:0,3,39	0/1:91,3:65:15.79:16,0,137	0/1:26,1:17:0.92:1,0,34	0/0:36,2:29:12.69:0,13,181	0/0:47,5:34:12.02:0,12,158	0/0:14,0:12:2.98:0,3,22	0/1:55,6:34:99:194,0,218	0/1:22,1:18:52.29:52,0,76	0/0:7,0:7:2.99:0,3,25
chr10	35421400	.	C	CAT	131.10	PASS	AB=0.983;AC=12;AF=0.261;AN=46;BaseQRankSum=5.506;DP=1108;FS=15.701;HRun=0;HaplotypeScore=186.1644;InbreedingCoeff=-0.2298;MQ=24.45;MQ0=106;MQRankSum=-5.496;QD=0.21;ReadPosRankSum=0.829;VQSLOD=1.8556;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:55,0:42:0.04:0,0,42	0/1:7,0:4:6.14:6,0,37	./.	./.	./.	0/0:23,0:20:2.74:0,3,12	0/0:50,0:23:0.47:0,0,1	0/1:86,1:13:50.79:51,0,60	0/0:46,0:33:22.61:0,23,302	0/1:86,1:52:89.58:90,0,443	./.	0/0:53,1:34:15.32:0,15,233	0/1:42,4:29:1.63:2,0,40	./.	1/1:62,1:46:0.47:1,0,0	0/0:43,0:26:20.86:0,21,266	0/0:29,0:25:1.08:0,1,371	0/1:33,0:26:18.10:18,0,261	0/1:44,0:11:18.49:18,0,83	0/0:18,0:15:3.01:0,3,45	0/1:102,0:72:6.33:6,0,166	0/0:29,0:17:3.01:0,3,46	0/0:39,0:30:12.97:0,13,223	0/0:55,0:36:20.91:0,21,241	0/0:15,0:12:3.01:0,3,39	0/1:67,0:35:46.10:46,0,354	0/1:21,1:17:3.85:4,0,175	0/0:8,0:8:3.01:0,3,43
chr10	35421402	.	CACAT	C	551.86	PASS	AB=0.991;AC=15;AF=0.313;AN=48;BaseQRankSum=5.471;DP=1158;FS=35.537;HRun=0;HaplotypeScore=201.4342;InbreedingCoeff=-0.1088;MQ=24.79;MQ0=111;MQRankSum=-6.362;QD=0.79;ReadPosRankSum=0.927;VQSLOD=1.3856;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:53,2:44:47.99:48,0,55	0/0:8,0:5:3.01:0,3,77	./.	./.	./.	1/1:23,0:20:2.60:10,3,0	1/1:52,1:24:0.47:1,0,0	0/1:90,0:13:8.10:127,0,8	0/0:46,3:35:25.50:0,26,541	0/1:89,0:54:99:196,0,633	0/0:10,0:8:0.47:0,0,1	0/0:53,1:35:7.17:0,7,348	0/0:46,1:31:7.06:0,7,65	./.	1/1:67,0:49:2.69:8,3,0	0/0:45,1:29:21.07:0,21,437	0/0:30,0:26:30.60:0,31,726	0/1:37,0:28:47.64:48,0,418	0/1:46,0:12:34.22:34,0,181	0/0:17,0:14:3:0,3,25	0/1:107,0:77:23.77:24,0,183	0/1:31,0:19:9.36:9,0,44	0/0:41,0:32:12.13:0,12,355	0/0:55,1:37:21.07:0,21,404	0/0:17,0:14:2.90:0,3,19	0/1:69,0:36:99:148,0,551	0/1:23,0:18:29.46:29,0,236	0/0:9,0:9:4.79:0,5,48
chr10	35421404	.	CAT	C	392.01	PASS	AB=0.973;AC=16;AF=0.333;AN=48;BaseQRankSum=4.468;DP=1197;FS=12.511;HRun=0;HaplotypeScore=201.9009;InbreedingCoeff=-0.2255;MQ=24.88;MQ0=116;MQRankSum=-3.219;QD=0.54;ReadPosRankSum=-0.321;VQSLOD=1.1832;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:56,2:45:50.77:57,0,51	0/1:9,0:6:15.61:16,0,50	./.	./.	./.	0/0:24,0:21:0.73:0,1,2	0/0:49,4:24:0:0,0,0	0/1:95,3:13:35.21:68,0,35	0/0:51,0:37:25.45:0,25,423	0/1:87,3:56:97.68:98,0,580	1/1:11,0:9:3:25,3,0	0/0:53,2:35:3.70:0,4,291	0/1:48,1:31:4.77:5,0,56	./.	1/1:65,3:51:5.37:24,5,0	0/0:43,2:29:20.97:0,21,353	0/0:30,0:26:16.04:0,16,535	0/1:38,1:29:26.92:27,0,381	0/1:45,4:13:37.74:38,0,144	0/0:19,0:16:3.01:0,3,47	0/1:101,4:78:38.59:39,0,192	0/1:33,1:21:21.55:22,0,39	0/0:42,1:34:6.31:0,6,278	0/0:51,6:37:21.07:0,21,351	0/0:17,0:14:2.97:0,3,41	0/1:67,3:37:94.68:95,0,474	0/1:26,0:21:12.63:13,0,163	0/1:10,0:10:1.97:2,0,40
chr10	35421406	.	T	TAC	1515.65	PASS	AB=0.955;AC=27;AF=0.563;AN=48;BaseQRankSum=1.866;DP=1235;FS=0.922;HRun=0;HaplotypeScore=208.3864;InbreedingCoeff=0.1089;MQ=24.84;MQ0=131;MQRankSum=-4.640;QD=1.73;ReadPosRankSum=0.649;VQSLOD=2.7361;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:56,0:46:29.18:43,0,29	1/1:8,1:6:5.70:34,6,0	./.	./.	./.	0/0:20,2:19:2.74:0,3,12	1/1:50,4:25:1.82:5,2,0	0/1:98,5:12:9.77:227,0,10	0/0:50,0:37:24.86:0,25,320	0/1:87,7:56:33.59:471,0,34	1/1:12,0:10:0.47:1,0,0	0/0:52,3:35:16.23:0,16,224	1/1:42,4:31:6.81:54,7,0	./.	1/1:63,5:50:3.23:17,3,0	0/0:45,2:30:20.95:0,21,278	0/1:30,1:28:10.40:10,0,374	0/1:39,2:30:82.10:150,0,82	0/1:51,1:13:13.36:54,0,13	1/1:16,2:15:1.24:3,1,0	1/1:100,8:81:17.85:84,18,0	1/1:29,4:22:6.89:33,7,0	0/0:41,2:34:13.75:0,14,197	0/0:56,1:39:21.05:0,21,272	1/1:17,1:15:2.73:15,3,0	0/1:62,7:37:20.80:382,0,21	0/1:26,0:21:2.26:76,0,2	0/1:10,0:10:3.86:4,0,10
chr10	35421408	.	C	CAT	791.42	PASS	AB=0.961;AC=14;AF=0.280;AN=50;BaseQRankSum=4.933;DP=1279;FS=36.148;HRun=0;HaplotypeScore=229.1273;InbreedingCoeff=-0.0999;MQ=25.20;MQ0=140;MQRankSum=-3.745;QD=0.98;ReadPosRankSum=0.420;VQSLOD=1.5382;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:54,3:45:33.22:33,0,51	0/0:7,2:6:1.88:0,2,5	./.	./.	./.	0/0:22,1:19:2.74:0,3,12	1/1:58,1:26:2.51:10,3,0	0/1:109,0:12:26.93:90,0,27	0/0:53,0:37:25.64:0,26,371	0/1:95,5:58:99:308,0,303	0/0:11,2:11:2.99:0,3,23	0/0:53,1:35:27.14:0,27,323	0/1:51,0:32:9.28:24,0,9	0/1:48,0:37:0:0,0,0	1/1:72,1:53:2.95:39,3,0	0/0:46,0:31:24:0,24,340	0/0:32,0:28:3.84:0,4,464	0/0:43,0:32:4.15:0,4,290	0/1:53,2:13:63.68:64,0,86	0/0:21,1:19:2.95:0,3,21	0/1:109,5:84:60.78:71,0,61	0/1:33,5:24:9.28:93,0,9	0/0:44,0:35:17.36:0,17,248	0/0:60,0:40:21.05:0,21,321	0/0:16,4:16:1.25:0,1,3	0/1:73,2:41:99:178,0,201	0/1:27,2:24:13.46:13,0,26	0/0:8,3:10:5.75:0,6,51
chr10	35421412	.	CAT	C	673.15	PASS	AB=0.977;AC=18;AF=0.360;AN=50;BaseQRankSum=3.084;DP=1369;FS=5.606;HRun=0;HaplotypeScore=240.5696;InbreedingCoeff=-0.2594;MQ=25.91;MQ0=156;MQRankSum=-4.323;QD=0.71;ReadPosRankSum=-3.360;VQSLOD=1.7766;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:58,1:45:0.76:1,0,80	0/1:10,0:8:14.53:15,0,22	./.	./.	./.	0/0:26,0:21:0.73:0,1,2	1/1:60,2:26:2.68:11,3,0	0/1:112,2:12:18.05:104,0,18	0/0:56,1:38:28.46:0,28,490	0/1:100,5:63:99:152,0,543	0/1:14,0:12:16.21:16,0,18	0/0:58,1:37:28.25:0,28,434	0/1:50,2:34:3.15:3,0,34	0/0:48,1:37:2.99:0,3,25	1/1:70,4:54:5.74:31,6,0	0/0:48,0:31:23.98:0,24,441	0/1:37,0:31:0.61:1,0,652	0/1:46,1:34:40.19:40,0,369	0/1:65,0:13:36.09:36,0,86	0/1:28,0:26:38.66:39,0,63	0/1:121,2:92:89.89:207,0,90	0/1:40,1:27:29.03:38,0,29	0/0:47,1:39:21.59:0,22,389	0/0:57,6:45:21.07:0,21,404	0/0:21,0:17:2.92:0,3,19	0/1:76,5:46:92.50:92,0,455	0/1:29,0:24:25.10:25,0,83	0/0:13,0:12:4.41:0,4,76
chr10	35421414	.	T	TAC	3551.91	PASS	AB=0.870;AC=22;AF=0.440;AN=50;BaseQRankSum=-2.223;DP=1405;FS=2.082;HRun=0;HaplotypeScore=245.9457;InbreedingCoeff=-0.0220;MQ=26.17;MQ0=161;MQRankSum=-5.398;QD=4.08;ReadPosRankSum=3.439;VQSLOD=2.6530;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:59,0:47:8.25:0,8,96	1/1:11,1:10:5.85:92,6,0	./.	./.	./.	0/0:22,5:22:2.64:0,3,11	1/1:64,2:29:0.81:1,1,0	1/1:112,1:12:6.55:76,7,0	0/0:58,1:41:30.65:0,31,372	0/1:101,12:69:99:727,0,210	0/1:14,3:15:32.42:41,0,32	0/0:57,2:37:11.81:0,12,332	1/1:34,16:33:0.39:105,0,0	0/0:33,14:36:3.01:0,3,38	0/0:62,13:54:4.46:0,4,54	0/0:47,2:32:26.96:0,27,340	0/1:37,1:32:0.68:1,0,488	0/1:37,8:34:99:356,0,105	0/1:61,3:13:35.45:199,0,35	0/1:24,6:27:64.57:126,0,65	0/1:97,22:95:45.63:505,0,46	0/1:29,9:26:81.18:81,0,122	0/0:46,2:40:5.50:0,6,311	0/0:60,6:46:21.05:0,21,279	1/1:15,5:17:2.91:52,3,0	0/1:65,14:46:99:807,0,234	1/1:22,7:24:20.34:309,20,0	0/1:11,3:13:30.14:74,0,30
chr10	35421416	.	C	CAT	1591.57	PASS	AB=0.965;AC=17;AF=0.340;AN=50;BaseQRankSum=-4.073;DP=1435;FS=0.000;HRun=0;HaplotypeScore=258.5854;InbreedingCoeff=-0.1828;MQ=26.32;MQ0=164;MQRankSum=-4.261;QD=2.15;ReadPosRankSum=4.898;VQSLOD=2.0207;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:60,0:47:2.58:0,3,100	0/1:12,1:10:33.56:41,0,34	./.	./.	./.	0/0:27,0:22:2.64:0,3,11	1/1:62,3:29:0.22:1,0,0	0/0:118,0:14:7.41:0,7,118	0/0:60,0:41:31.39:0,31,428	0/1:117,2:73:99:335,0,557	0/1:18,2:18:14.19:14,0,62	0/0:58,0:37:26.25:0,26,405	0/1:52,1:34:34.92:48,0,35	0/0:47,2:37:3.01:0,3,45	0/0:75,1:55:7.35:0,7,92	0/0:52,0:33:31.31:0,31,438	0/0:38,0:32:27.15:0,27,643	0/1:46,1:34:99:190,0,268	0/1:64,1:13:62.06:158,0,62	0/1:30,1:27:46.47:46,0,110	0/1:130,1:99:99:229,0,111	0/1:41,1:28:27.23:27,0,199	0/0:49,0:40:20.91:0,21,400	0/0:64,0:45:21.05:0,21,321	1/1:20,1:17:2.79:34,3,0	0/1:84,2:48:99:415,0,382	1/1:28,1:24:5.23:174,5,0	0/1:13,1:13:23.98:24,0,88
chr10	35421418	.	C	CAT	1574.08	PASS	AB=0.991;AC=18;AF=0.360;AN=50;BaseQRankSum=-1.140;DP=1481;FS=1.930;HRun=0;HaplotypeScore=277.5479;InbreedingCoeff=-0.1903;MQ=26.59;MQ0=168;MQRankSum=-4.785;QD=1.76;ReadPosRankSum=4.596;VQSLOD=2.1028;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:62,0:49:12.28:0,12,145	0/1:12,0:10:32.58:41,0,33	./.	./.	./.	0/0:27,0:22:2.74:0,3,12	1/1:67,0:29:0.22:1,0,0	0/1:120,0:17:25.61:26,0,97	0/0:61,0:42:31.61:0,32,442	0/1:121,2:78:99:294,0,624	0/1:21,0:19:8.26:8,0,103	0/0:59,0:37:27.29:0,27,409	0/1:56,0:37:34.27:48,0,34	0/0:51,0:39:2.69:0,3,45	0/0:77,0:56:4.15:0,4,82	0/0:53,0:34:30.06:0,30,433	0/0:39,0:32:30.96:0,31,671	0/1:48,0:35:99:183,0,210	0/1:68,1:14:77.31:114,0,77	0/1:36,0:31:45.48:45,0,110	0/1:137,0:104:99:225,0,149	0/1:43,0:30:27.24:27,0,185	0/0:50,0:41:14.46:0,14,393	0/0:63,1:45:21.05:0,21,321	1/1:23,1:20:2.78:34,3,0	0/1:87,1:51:99:426,0,371	1/1:29,0:24:22.75:178,23,0	0/1:14,1:14:71.55:72,0,86
chr10	35421419	.	A	ACG	1257.25	PASS	AB=0.995;AC=14;AF=0.280;AN=50;BaseQRankSum=-3.675;DP=1511;FS=0.580;HRun=0;HaplotypeScore=283.9821;InbreedingCoeff=-0.2525;MQ=26.96;MQ0=171;MQRankSum=-2.048;QD=1.75;ReadPosRankSum=5.039;VQSLOD=1.4005;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:63,0:49:15.81:0,16,173	0/1:13,0:10:33.58:41,0,34	./.	./.	./.	0/0:29,0:23:6.11:0,6,32	0/0:67,0:30:0.47:0,0,2	0/0:127,0:22:11.52:0,12,142	0/0:62,0:43:31.61:0,32,442	0/1:124,1:78:99:230,0,836	0/1:21,0:19:7.25:7,0,104	0/0:59,0:37:27.29:0,27,406	0/1:56,0:37:47.12:47,0,55	0/0:51,0:39:2.69:0,3,45	0/0:80,0:58:9.06:0,9,101	0/0:53,1:35:32.97:0,33,460	0/0:37,0:32:40.33:0,40,661	0/1:48,0:35:99:184,0,300	0/1:68,0:14:59.61:60,0,105	0/1:36,0:31:40.53:41,0,128	0/1:138,1:108:99:212,0,155	0/1:48,0:34:28.11:28,0,188	0/0:51,0:42:18.22:0,18,397	0/0:67,0:47:20.16:0,20,320	1/1:26,0:22:2.65:33,3,0	0/1:92,1:53:99:381,0,448	0/1:29,0:24:12.21:118,0,12	0/1:15,0:14:18.12:18,0,127
chr10	35421422	.	T	TAC	1140.11	PASS	AB=0.963;AC=19;AF=0.380;AN=50;BaseQRankSum=5.613;DP=1555;FS=10.407;HRun=0;HaplotypeScore=281.3854;InbreedingCoeff=-0.2331;MQ=26.99;MQ0=183;MQRankSum=-3.666;QD=1.24;ReadPosRankSum=2.195;VQSLOD=0.7154;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:50:6.71:0,7,69	0/1:12,0:10:18.64:19,0,30	./.	./.	./.	0/0:27,0:23:5.67:0,6,47	0/0:64,1:30:1.98:0,2,18	0/0:134,0:24:47.01:0,47,525	0/0:61,0:43:33.96:0,34,440	0/1:111,7:80:99:365,0,515	0/1:22,0:20:3.43:3,0,32	0/0:53,5:37:28.37:0,28,362	0/1:61,1:41:40.95:41,0,57	1/1:53,1:40:1.71:4,2,0	1/1:76,3:58:2.84:7,3,0	0/0:53,2:36:36:0,36,477	0/1:32,5:33:17.92:18,0,555	0/1:45,3:35:98.11:98,0,207	0/1:71,2:14:61.08:69,0,61	0/1:39,0:34:19.96:20,0,34	0/1:133,7:111:74.11:74,0,171	0/1:48,0:34:21.14:21,0,62	0/0:49,1:41:11.48:0,11,393	0/0:55,3:48:26.16:0,26,340	1/1:28,0:24:7.40:26,7,0	0/1:86,4:55:69.87:404,0,70	0/1:27,2:24:23.55:101,0,24	0/1:15,0:14:16.09:16,0,96
chr10	35421430	.	T	TAC	3643.97	PASS	AB=0.875;AC=16;AF=0.308;AN=52;BaseQRankSum=1.125;DP=1662;FS=23.707;HRun=0;HaplotypeScore=291.2144;InbreedingCoeff=-0.3353;MQ=27.38;MQ0=198;MQRankSum=-1.611;QD=3.59;ReadPosRankSum=-4.020;VQSLOD=1.1605;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:55,9:50:29.05:79,0,29	0/0:12,2:12:7.75:0,8,78	0/0:8,0:1:3.01:0,3,36	./.	./.	0/0:28,2:25:6.16:0,6,53	0/1:75,2:34:11.56:12,0,50	0/0:127,0:27:65.87:0,66,784	0/0:61,3:44:33.54:0,34,418	0/1:125,14:92:99:867,0,903	0/1:18,6:22:61.44:190,0,61	0/0:58,2:37:12.71:0,13,280	0/0:62,6:49:9.01:0,9,98	1/1:50,6:42:3.47:53,3,0	0/1:76,9:61:23.29:126,0,23	0/0:53,2:36:35.99:0,36,442	0/0:38,0:32:27.16:0,27,570	0/1:45,4:36:99:166,0,423	0/1:75,6:15:99:186,0,138	0/1:34,6:35:99:216,0,261	0/1:132,22:121:99:216,0,560	0/1:38,12:37:99:373,0,123	0/0:50,0:40:14.19:0,14,368	0/0:64,3:50:29.15:0,29,352	0/1:24,8:28:52.54:225,0,53	0/1:85,14:63:99:655,0,586	0/1:26,4:24:8.02:8,0,182	0/1:17,5:21:99:274,0,155
chr10	35421436	.	CAT	C	1244	PASS	AB=0.987;AC=13;AF=0.241;AN=54;BaseQRankSum=2.496;DP=1779;FS=19.711;HRun=0;HaplotypeScore=318.4486;InbreedingCoeff=0.7320;MQ=28.67;MQ0=187;MQRankSum=4.709;QD=2.79;ReadPosRankSum=3.700;VQSLOD=0.9277;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:64,1:52:2.65:0,3,151	0/0:17,0:14:14.01:0,14,231	0/0:10,0:2:5.99:0,6,79	0/0:17,0:1:3:0,3,25	./.	0/0:33,0:25:3.90:0,4,59	0/0:81,0:38:7.61:0,8,121	0/0:128,0:30:64.56:0,65,909	1/1:69,1:49:38.22:204,38,0	0/0:155,1:104:89.36:0,89,2575	0/0:28,0:25:22.81:0,23,244	1/1:66,2:45:41.64:256,42,0	0/0:76,0:52:16.81:0,17,243	0/0:65,0:49:2.60:0,3,28	0/0:91,1:68:9.17:0,9,111	1/1:62,1:41:43.29:243,43,0	1/1:41,0:34:13.66:257,14,0	0/0:54,1:41:27.91:0,28,875	0/1:77,1:16:16.92:17,0,330	0/0:47,0:41:50.95:0,51,664	0/0:165,0:132:70.36:0,70,1237	0/0:58,1:47:38.80:0,39,464	1/1:50,1:41:37.39:241,37,0	1/1:74,0:55:27.06:207,27,0	0/0:36,1:31:29.61:0,30,332	0/0:103,3:68:91.38:0,91,1737	0/0:29,0:23:24.49:0,24,399	0/0:25,0:24:52.72:0,53,579
chr10	35421438	.	TAC	T	3437.98	PASS	AC=12;AF=0.222;AN=54;BaseQRankSum=-1.683;DP=1803;FS=15.405;HRun=0;HaplotypeScore=315.6057;InbreedingCoeff=0.8451;MQ=28.91;MQ0=187;MQRankSum=6.004;QD=9.24;ReadPosRankSum=4.158;VQSLOD=2.2438;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:67,0:53:17.79:0,18,203	0/0:17,0:14:15.52:0,16,254	0/0:10,0:2:6.02:0,6,95	0/0:19,0:2:3.01:0,3,44	./.	0/0:33,0:25:3.90:0,4,53	0/0:81,0:39:9.22:0,9,137	0/0:127,0:33:71.31:0,71,980	1/1:50,22:51:45.39:563,45,0	0/0:155,1:105:97.68:0,98,3033	0/0:28,0:26:23.11:0,23,326	1/1:50,18:44:28.71:574,29,0	0/0:77,0:53:15.79:0,16,259	0/0:66,0:50:2.61:0,3,49	0/0:91,1:68:14.03:0,14,182	1/1:41,23:42:48.02:623,48,0	1/1:26,17:36:22.20:712,22,0	0/0:55,0:41:32.43:0,32,919	0/0:78,0:16:11.07:0,11,380	0/0:49,0:43:54.14:0,54,814	0/0:166,0:133:99:0,107,1526	0/0:63,0:51:44.79:0,45,664	1/1:32,18:40:32.98:470,33,0	1/1:61,14:56:24.95:497,25,0	0/0:38,0:32:33.07:0,33,525	0/0:110,1:73:82.75:0,83,2065	0/0:29,0:23:9.97:0,10,337	0/0:26,0:25:54.21:0,54,790
chr10	35421446	.	CAT	C	1087.68	PASS	AB=0.983;AC=9;AF=0.167;AN=54;BaseQRankSum=4.264;DP=1920;FS=28.607;HRun=0;HaplotypeScore=349.3826;InbreedingCoeff=0.2356;MQ=29.78;MQ0=177;MQRankSum=5.349;QD=2.37;ReadPosRankSum=5.230;VQSLOD=1.0495;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:67,1:54:19.61:0,20,284	0/0:19,0:15:14.96:0,15,288	0/0:22,0:5:14.98:0,15,206	0/0:27,0:3:5.78:0,6,80	./.	0/0:36,1:29:4.24:0,4,78	0/0:81,3:42:11.71:0,12,183	0/0:145,0:45:99:0,129,1707	1/1:66,4:51:20.36:226,20,0	0/0:158,1:111:84.44:0,84,3482	0/0:34,0:32:29.09:0,29,455	1/1:64,5:46:8.68:207,9,0	0/0:70,7:53:17.18:0,17,322	0/0:67,1:52:2.61:0,3,57	0/0:95,3:71:5.88:0,6,209	0/1:65,1:46:42.83:198,0,43	0/1:47,1:42:47.42:253,0,47	0/0:52,4:42:40.45:0,40,1129	0/1:70,0:18:27.25:27,0,419	0/0:53,0:47:60.17:0,60,1033	0/0:176,6:150:99:0,125,2049	0/0:71,0:60:53.70:0,54,887	0/1:53,1:44:64.15:153,0,64	0/1:76,1:58:13.43:167,0,13	0/0:43,0:37:38.52:0,39,648	0/0:118,1:80:62.71:0,63,2608	0/0:29,1:24:27.05:0,27,428	0/0:29,0:28:64.88:0,65,1048
chr10	35421552	.	TACAC	T	2903.16	PASS	AB=0.938;AC=18;AF=0.346;AN=52;BaseQRankSum=-4.920;DP=2985;DS;FS=0.000;HRun=0;HaplotypeScore=418.9195;InbreedingCoeff=-0.3063;MQ=25.48;MQ0=499;MQRankSum=-0.356;QD=1.52;ReadPosRankSum=-6.052;VQSLOD=-0.1338;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:111,3:81:48.63:49,0,172	0/1:30,0:17:49.37:73,0,49	./.	./.	0/0:80,0:51:27.09:0,27,611	0/0:66,2:46:3.48:0,3,53	0/1:144,6:65:26.95:27,0,155	0/1:212,2:31:99:103,0,491	0/0:143,0:99:99:0,107,2289	0/1:209,7:113:99:609,0,2986	0/1:45,5:29:0.06:19,0,0	0/0:138,0:89:55.80:0,56,1179	0/1:114,8:74:79.54:80,0,222	0/1:105,10:78:38.07:38,0,152	0/0:155,6:100:12.04:0,12,225	0/0:118,0:64:43.05:0,43,1021	0/0:96,0:70:99:0,116,2499	0/1:100,1:69:58.12:58,0,1682	0/1:91,3:32:99:133,0,515	0/1:52,10:51:99:218,0,337	0/1:207,7:152:99:180,0,196	1/1:77,4:52:17.69:195,18,0	0/0:86,0:59:29.68:0,30,622	0/0:175,0:137:99:0,117,2484	0/1:61,5:43:3.58:4,0,108	0/1:162,5:79:99:445,0,1468	0/1:33,6:29:80.49:465,0,80	0/1:42,5:42:99:365,0,580
chr10	35421611	.	ACACATAC	A	333.47	PASS	AB=0.985;AC=17;AF=0.315;AN=54;BaseQRankSum=8.475;DP=1230;DS;FS=2.333;HRun=0;HaplotypeScore=200.1339;InbreedingCoeff=0.2203;MQ=32.43;MQ0=168;MQRankSum=-6.482;QD=0.69;ReadPosRankSum=-0.496;VQSLOD=2.6358;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:24,1:16:0.08:0,0,0	./.	0/0:70,0:12:33.10:0,33,627	0/0:59,0:9:27.09:0,27,611	0/0:24,0:21:27.09:0,27,843	1/1:27,0:20:2.15:8,2,0	0/1:38,2:18:2.58:3,0,3	0/0:90,0:24:38.96:0,39,618	0/0:67,1:56:99:0,120,3585	0/1:47,0:22:43.02:43,0,115	0/1:14,0:9:0.03:0,0,0	0/0:68,0:53:99:0,100,3431	0/1:37,0:24:29.67:34,0,30	1/1:42,1:30:2.09:8,2,0	0/0:50,2:25:8.67:0,9,119	0/0:65,0:55:96.88:0,97,3105	0/0:66,1:58:99:0,115,3595	0/1:40,1:32:99:128,0,371	0/1:40,0:12:9.45:9,0,226	0/0:20,0:15:11.70:0,12,110	0/1:87,2:55:3.79:4,0,101	1/1:25,0:13:0.47:1,0,0	0/0:31,0:24:35.68:0,36,1091	0/0:83,0:73:99:0,112,3804	0/0:25,0:17:2.88:0,3,15	0/1:47,0:26:99:136,0,199	0/0:13,0:6:5.93:0,6,57	1/1:11,0:11:14.28:96,14,0
chr10	35421624	.	ATAC	A	1045.11	PASS	AB=0.957;AC=24;AF=0.462;AN=52;BaseQRankSum=8.331;DP=892;FS=7.014;HRun=0;HaplotypeScore=133.9615;InbreedingCoeff=0.2402;MQ=35.67;MQ0=82;MQRankSum=-5.872;QD=2.74;ReadPosRankSum=-3.668;VQSLOD=0.2419;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:8:2.44:29,2,0	./.	0/0:83,0:20:57.03:0,57,1205	0/0:74,0:11:26.61:0,27,538	0/0:20,0:19:21.07:0,21,517	1/1:15,2:9:3.01:48,3,0	0/1:21,0:12:38.13:38,0,46	0/1:39,0:22:1.99:2,0,306	0/0:55,0:49:99:0,125,2928	0/1:21,4:13:99:225,0,102	0/0:7,1:5:0:0,0,0	0/0:55,0:49:99:0,118,2725	1/1:16,6:13:5.95:44,6,0	1/1:25,1:20:2.96:49,3,0	0/1:34,2:17:0:0,0,0	0/0:44,0:39:99:0,105,2379	0/0:55,0:49:99:0,105,2584	0/1:18,1:13:70.68:71,0,127	0/1:30,1:10:99:123,0,174	1/1:9,3:5:5.99:50,6,0	0/1:55,1:32:34.05:34,0,65	./.	0/0:27,0:24:47.67:0,48,1012	0/0:68,1:61:99:0,118,2697	1/1:12,0:8:2.41:24,2,0	0/1:33,2:23:99:369,0,101	1/1:5,2:5:2.99:23,3,0	1/1:8,1:9:4.86:74,5,0
chr10	35421625	.	TACC	T	773.68	PASS	AB=0.843;AC=21;AF=0.404;AN=52;BaseQRankSum=9.306;DP=876;FS=14.716;HRun=0;HaplotypeScore=129.8162;InbreedingCoeff=0.2308;MQ=35.62;MQ0=85;MQRankSum=-7.097;QD=2.32;ReadPosRankSum=-3.427;VQSLOD=0.6511;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:8,6:8:2.18:12,2,0	./.	0/0:83,1:20:54.10:0,54,1137	0/0:72,0:11:10.16:0,10,402	0/0:17,0:17:21.07:0,21,478	1/1:14,0:8:2.89:24,3,0	0/1:15,4:10:14.15:14,0,70	0/0:37,0:20:12:0,12,220	0/0:54,1:49:99:0,119,2668	0/1:22,2:12:99:151,0,105	0/0:5,1:5:0:0,0,0	0/0:54,0:48:99:0,115,2494	1/1:21,0:13:4.11:31,4,0	1/1:18,2:19:2.94:24,3,0	1/1:28,3:17:0.47:1,0,0	0/0:43,0:38:99:0,102,2191	0/0:48,5:47:59.65:0,60,2321	0/1:9,7:12:99:112,0,119	0/1:32,0:11:53.61:54,0,163	0/1:11,0:4:0:0,0,0	0/1:41,8:31:59.36:65,0,59	./.	0/0:27,0:24:39.13:0,39,898	0/0:64,5:62:99:0,118,2557	0/1:9,0:8:0.03:0,0,1	0/1:25,4:23:91.06:380,0,91	0/1:5,0:4:0:0,0,0	1/1:7,1:9:4.80:49,5,0
chr10	35421687	.	CAT	C	1711.44	PASS	AB=0.991;AC=21;AF=0.375;AN=56;BaseQRankSum=-2.517;DP=1792;FS=1.147;HRun=0;HaplotypeScore=333.7563;InbreedingCoeff=-0.2875;MQ=28.32;MQ0=162;MQRankSum=6.062;QD=1.32;ReadPosRankSum=3.229;VQSLOD=1.5978;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:63,1:44:11.90:0,12,124	0/1:22,0:13:8.22:14,0,8	0/0:29,0:5:11.93:0,12,89	0/1:31,0:3:0.89:1,0,13	0/0:52,0:34:3.01:0,3,32	0/1:46,1:32:11.82:12,0,74	1/1:63,0:41:8.02:51,8,0	0/0:123,1:59:26.22:0,26,1006	0/1:90,1:68:90.01:265,0,90	0/1:94,3:53:99:107,0,907	0/0:38,1:27:6.93:0,7,57	0/1:94,2:70:99:396,0,188	0/1:84,1:61:17.47:17,0,459	0/0:68,0:46:21.85:0,22,255	0/1:104,0:78:7.58:8,0,85	0/1:69,0:40:78.75:184,0,79	0/1:77,3:63:99:289,0,248	0/1:66,0:41:22.42:22,0,244	0/1:59,0:23:10.52:11,0,257	0/0:45,0:29:5.14:0,5,60	0/1:110,2:75:30.08:30,0,64	0/0:54,0:32:5.07:0,5,27	1/1:54,2:33:22.29:111,22,0	0/1:90,1:74:11.60:331,0,12	0/0:22,1:17:5.02:0,5,61	0/1:88,0:54:11.13:11,0,725	0/1:22,0:16:3.70:4,0,237	0/1:13,0:12:6.41:6,0,187
chr10	35421689	.	TAC	T	5328.79	PASS	AB=0.925;AC=28;AF=0.538;AN=52;BaseQRankSum=-8.860;DP=1799;FS=47.804;HRun=0;HaplotypeScore=329.1661;InbreedingCoeff=-0.1402;MQ=28.26;MQ0=167;MQRankSum=9.560;QD=3.68;ReadPosRankSum=4.547;VQSLOD=2.7141;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:62,0:44:6.34:0,6,141	0/1:20,3:14:6.80:7,0,7	./.	./.	0/0:48,7:38:2.96:0,3,33	0/1:44,2:32:6.78:7,0,55	1/1:60,5:42:17.87:193,18,0	0/1:124,2:59:99:170,0,553	1/1:59,29:68:68.53:882,69,0	0/1:95,3:54:87.74:88,0,749	0/1:38,0:27:24.13:24,0,28	1/1:75,15:68:54.40:822,54,0	0/0:78,5:61:2.75:0,3,511	0/0:62,4:46:26.28:0,26,246	0/1:97,5:78:93.73:100,0,94	1/1:46,16:40:7.32:548,7,0	0/1:56,20:62:99:792,0,141	0/1:60,4:41:85.61:86,0,243	0/1:57,3:23:23.43:23,0,160	0/1:44,4:32:9.12:9,0,31	0/1:107,2:74:36.64:37,0,128	1/1:51,3:34:4.60:22,5,0	1/1:48,8:34:16.33:362,16,0	1/1:65,26:75:74.87:946,75,0	0/1:20,2:17:22.89:23,0,42	0/1:83,6:55:99:174,0,584	0/0:20,2:16:17.14:0,17,209	0/1:12,1:12:14.03:14,0,238
chr10	35421699	.	CACAT	C	199.32	PASS	AB=0.997;AC=16;AF=0.308;AN=52;BaseQRankSum=3.183;DP=1806;FS=16.992;HRun=0;HaplotypeScore=387.6217;InbreedingCoeff=-0.2421;MQ=28.65;MQ0=180;MQRankSum=-1.561;QD=0.19;ReadPosRankSum=-4.227;VQSLOD=0.6199;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:66,0:46:13.29:0,13,290	0/0:23,0:13:2.67:0,3,33	./.	./.	0/0:54,2:38:2.96:0,3,20	0/1:50,0:34:2.83:3,0,154	1/1:72,1:43:8.54:52,9,0	0/1:128,0:42:25.53:26,0,722	0/0:89,1:68:68.69:0,69,559	0/0:105,1:58:55.72:0,56,1398	0/1:42,0:29:17.18:17,0,65	0/1:90,0:64:77.13:77,0,358	0/1:89,0:67:9.82:10,0,899	0/1:71,0:49:3.48:3,0,409	0/1:104,2:81:20.79:21,0,193	0/0:65,0:38:26.34:0,26,316	0/0:79,0:62:64.49:0,64,873	0/1:59,0:40:35.35:35,0,400	0/1:59,0:19:25.17:25,0,230	0/1:50,0:35:2.30:2,0,71	0/1:101,0:72:10.94:11,0,204	0/0:61,1:38:11.45:0,11,117	0/0:61,0:38:35.14:0,35,243	0/0:89,3:75:51.37:0,51,454	0/1:26,0:20:1.97:2,0,139	0/1:89,1:59:42.59:43,0,925	0/1:23,0:17:15.53:16,0,284	0/0:16,0:15:25.48:0,25,395
chr10	35421701	.	CAT	C	1677.19	PASS	AB=0.973;AC=20;AF=0.385;AN=52;BaseQRankSum=-7.228;DP=1798;FS=4.187;HRun=0;HaplotypeScore=361.5058;InbreedingCoeff=-0.2522;MQ=28.70;MQ0=180;MQRankSum=6.318;QD=1.29;ReadPosRankSum=0.662;VQSLOD=1.4831;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:61,5:46:13.28:0,13,211	0/0:24,0:14:1.88:0,2,16	./.	./.	0/0:56,2:39:2.91:0,3,20	0/1:50,1:35:22.15:22,0,136	1/1:72,1:42:11.42:56,11,0	0/1:125,0:41:67.35:67,0,636	0/1:80,6:64:26.97:315,0,27	0/1:100,5:57:11.10:11,0,919	0/1:42,0:29:1.81:2,0,55	0/1:82,7:63:31.23:322,0,31	0/1:85,5:67:16.69:17,0,599	0/0:64,7:49:28.92:0,29,313	0/1:103,3:81:17.45:17,0,139	1/1:61,4:37:10.24:181,10,0	0/1:79,2:64:99:233,0,304	0/1:59,2:39:92.06:92,0,334	0/1:59,1:17:26.42:26,0,213	0/0:50,1:35:5.10:0,5,59	0/0:99,3:73:12.25:0,12,227	0/0:61,1:38:10.32:0,10,82	0/1:60,1:38:26.37:108,0,26	1/1:92,2:77:2.56:298,3,0	0/0:24,1:19:13.68:0,14,118	0/1:87,1:58:46.12:46,0,709	0/1:23,0:17:16.39:16,0,156	0/0:16,0:15:1.32:0,1,297
chr10	35421703	.	T	TAC	1025.12	PASS	AB=0.993;AC=26;AF=0.500;AN=52;BaseQRankSum=1.455;DP=1793;FS=14.653;HRun=0;HaplotypeScore=374.3957;InbreedingCoeff=-0.0855;MQ=28.91;MQ0=180;MQRankSum=-1.063;QD=0.79;ReadPosRankSum=-2.487;VQSLOD=0.6207;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:60,6:46:10.41:28,10,0	1/1:24,0:14:8.35:68,8,0	./.	./.	0/1:56,1:40:6.15:6,0,14	1/1:50,0:36:11.58:51,12,0	1/1:71,0:41:4.59:17,5,0	0/1:119,0:39:53.94:54,0,202	0/0:83,0:63:72.72:0,73,933	0/1:103,2:58:37.83:38,0,421	0/1:42,0:29:26.78:27,0,29	0/0:88,2:64:51.81:0,52,707	0/1:89,1:67:99:198,0,240	0/1:71,0:49:15.59:16,0,90	0/1:104,2:82:7.12:63,0,7	0/0:62,0:36:11.75:0,12,525	0/0:76,0:61:91.14:0,91,1181	0/1:61,1:40:85.56:175,0,86	0/1:58,0:16:36.62:37,0,55	0/1:51,0:36:5.43:5,0,34	0/1:100,1:72:15.29:15,0,21	1/1:64,0:41:9.30:44,9,0	0/0:64,1:42:45.28:0,45,500	0/0:90,4:77:80.46:0,80,963	0/1:26,0:20:14.59:15,0,41	0/1:88,0:57:99:222,0,229	0/1:24,0:18:24.90:48,0,25	1/1:16,0:15:9.41:68,9,0
chr10	35421711	.	T	TAC	5903.80	PASS	AB=0.923;AC=30;AF=0.577;AN=52;BaseQRankSum=-2.593;DP=1796;FS=23.758;HRun=0;HaplotypeScore=355.8592;InbreedingCoeff=0.0320;MQ=29.71;MQ0=173;MQRankSum=-2.543;QD=4.22;ReadPosRankSum=-2.448;VQSLOD=2.4935;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:54,6:49:21.18:304,21,0	1/1:20,2:14:8.52:108,9,0	./.	./.	0/0:62,0:45:5.41:0,5,49	1/1:36,9:36:24.91:356,25,0	1/1:55,8:39:9.11:107,9,0	0/1:122,7:38:3.96:547,0,4	0/0:76,0:68:74.50:0,74,907	0/1:73,10:59:99:629,0,233	0/1:32,5:28:26.81:60,0,27	0/1:76,0:60:34.01:34,0,583	0/1:58,16:70:99:680,0,102	0/1:41,14:50:52.42:314,0,52	1/1:76,10:80:17.13:184,17,0	0/1:57,1:36:40.37:40,0,424	0/0:71,0:62:76.81:0,77,1252	0/1:49,4:40:41.47:353,0,41	0/1:51,2:18:13.98:139,0,14	0/1:47,4:39:5.37:5,0,33	1/1:77,19:75:2.26:435,2,0	1/1:52,9:42:15.54:148,16,0	0/0:58,0:41:42.13:0,42,502	0/0:86,0:78:86.82:0,87,1091	0/1:21,4:22:29.06:129,0,29	0/1:74,5:57:52.49:568,0,52	1/1:16,6:21:29.65:375,30,0	1/1:7,8:15:27.85:387,28,0
chr10	35421713	.	C	CAT	2371.60	PASS	AB=0.993;AC=21;AF=0.404;AN=52;BaseQRankSum=-2.245;DP=1810;FS=22.524;HRun=0;HaplotypeScore=383.9365;InbreedingCoeff=-0.4254;MQ=29.88;MQ0=171;MQRankSum=-1.604;QD=1.74;ReadPosRankSum=1.822;VQSLOD=0.6504;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:68,0:50:0.68:131,0,1	0/1:24,0:14:4:53,0,4	./.	./.	0/0:66,0:47:5.74:0,6,80	0/1:52,1:37:33.38:174,0,33	1/1:69,0:38:11.60:69,12,0	0/1:134,0:37:99:247,0,140	0/0:86,0:68:90.95:0,91,1319	0/1:107,0:63:99:228,0,457	0/1:41,0:29:19.84:20,0,39	0/1:81,0:60:22.85:23,0,880	0/1:93,0:70:99:268,0,243	0/1:70,0:50:88.74:146,0,89	0/1:100,2:82:39.79:140,0,40	0/1:61,2:36:43.82:44,0,613	0/0:77,0:61:99:0,104,1617	0/1:63,1:42:99:182,0,156	0/1:56,0:18:25.46:25,0,84	0/0:56,0:39:4.99:0,5,55	0/1:97,3:75:14.93:191,0,15	0/1:65,0:42:31.67:37,0,32	0/0:62,1:40:45.07:0,45,631	0/0:93,1:80:99:0,100,1424	0/1:29,0:23:32.92:33,0,62	0/1:92,0:60:99:177,0,306	0/1:26,0:21:12.29:133,0,12	0/1:19,0:18:1.02:203,0,1
chr10	35421717	.	C	CAT	2096.60	PASS	AB=0.989;AC=19;AF=0.365;AN=52;BaseQRankSum=-0.368;DP=1794;FS=13.964;HRun=0;HaplotypeScore=377.5849;InbreedingCoeff=-0.4532;MQ=30.41;MQ0=168;MQRankSum=-2.653;QD=1.75;ReadPosRankSum=4.583;VQSLOD=0.7783;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:66,2:51:25.81:128,0,26	1/1:23,0:13:5.89:61,6,0	./.	./.	0/0:68,1:50:5.74:0,6,80	0/1:52,0:37:29.98:138,0,30	0/1:64,0:37:16.98:33,0,17	0/1:128,0:34:99:248,0,139	0/0:84,0:67:84.76:0,85,1293	0/1:105,1:63:99:219,0,706	0/1:40,0:29:11.76:12,0,70	0/0:81,1:59:38.32:0,38,963	0/1:92,1:70:99:341,0,239	0/1:67,0:48:99:150,0,109	0/1:97,2:80:46.20:53,0,46	0/0:64,4:41:1.32:0,1,691	0/0:78,0:61:84.08:0,84,1619	0/1:62,0:42:99:169,0,220	0/1:55,0:18:1.76:2,0,143	0/0:55,0:39:4.35:0,4,50	0/1:98,0:75:93.66:175,0,94	0/1:63,1:42:35.21:37,0,35	0/0:61,0:38:42.27:0,42,614	0/0:93,1:79:95.89:0,96,1398	0/1:31,0:25:31.87:32,0,67	0/1:92,0:62:99:141,0,533	0/1:27,0:22:52.71:126,0,53	0/1:20,0:19:44.51:183,0,45
chr10	35421928	.	AC	A	11890.17	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=8.551;DP=601;FS=1.924;HRun=3;HaplotypeScore=69.7202;InbreedingCoeff=0.9974;MQ=76.38;MQ0=0;MQRankSum=-3.804;QD=30.41;ReadPosRankSum=1.635;VQSLOD=4.6417;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,51:54:99:1784,144,0	1/1:0,8:8:21.07:260,21,0	0/0:21,0:21:60.20:0,60,846	0/0:22,0:22:57.16:0,57,782	0/0:14,0:13:39.13:0,39,560	1/1:0,12:12:36.11:446,36,0	1/1:0,30:30:72.23:892,72,0	1/1:0,35:35:99:1218,102,0	0/0:14,0:14:36.12:0,36,517	1/1:0,27:25:66.21:818,66,0	1/1:0,13:10:18.06:223,18,0	0/0:21,0:21:51.08:0,51,674	1/1:1,18:19:48.15:592,48,0	1/1:2,21:22:54.17:668,54,0	1/1:1,14:15:33.10:409,33,0	0/0:11,0:11:33.11:0,33,475	0/0:49,0:49:99:0,126,1773	1/1:0,12:12:30.09:372,30,0	1/1:2,16:18:45.11:541,45,0	1/1:0,16:14:27.08:335,27,0	1/1:0,15:15:45.14:558,45,0	1/1:1,25:22:54.17:669,54,0	0/0:21,0:21:57.19:0,57,817	0/0:37,0:37:84.26:0,84,1187	1/1:0,16:16:39.12:483,39,0	1/1:0,25:25:75.22:916,75,0	1/1:0,9:9:24.08:297,24,0	1/1:2,16:17:33.10:409,33,0
chr10	35422053	.	A	ATGTGCG	18787.15	PASS	AB=0.625;AC=49;AF=0.907;AN=54;BaseQRankSum=-6.424;DP=697;FS=4.499;HRun=0;HaplotypeScore=273.9500;InbreedingCoeff=0.6211;MQ=49.41;MQ0=5;MQRankSum=-2.842;QD=30.06;ReadPosRankSum=3.339;VQSLOD=4.3942;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:18,20:43:8.64:283,9,0	1/1:4,6:10:6.02:135,6,0	0/0:17,0:12:25.62:0,26,479	0/0:31,0:20:19.94:0,20,432	1/1:12,8:19:3.35:25,3,0	1/1:12,5:17:7.92:256,8,0	1/1:15,23:44:21.91:628,22,0	1/1:16,20:43:99:2709,102,0	1/1:8,15:24:35.96:858,36,0	1/1:7,16:23:54.19:1839,54,0	0/1:6,9:15:0.15:0,0,0	1/1:12,22:34:36.09:1040,36,0	1/1:13,19:32:42.57:1322,43,0	1/1:10,17:27:8.40:409,8,0	1/1:12,13:25:15.96:420,16,0	1/1:3,16:19:6.59:211,7,0	1/1:15,12:28:48.64:1479,49,0	1/1:11,7:17:30.57:899,31,0	1/1:14,8:22:60.16:1697,60,0	1/1:9,7:16:2.04:103,2,0	1/1:27,19:44:14.81:335,15,0	./.	1/1:9,9:19:9:153,9,0	1/1:16,17:33:10.18:110,10,0	1/1:3,8:12:6:76,6,0	1/1:7,16:25:59.94:1824,60,0	1/1:7,8:15:36.11:1051,36,0	1/1:5,10:15:27.09:926,27,0
chr10	35422078	.	T	TACAC	5061.64	PASS	AB=0.750;AC=37;AF=0.685;AN=54;BaseQRankSum=2.684;DP=666;FS=12.324;HRun=0;HaplotypeScore=260.6747;InbreedingCoeff=-0.1117;MQ=42.62;MQ0=16;MQRankSum=-1.808;QD=8.88;ReadPosRankSum=1.620;VQSLOD=2.2356;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:26.92:0,27,426	1/1:6,1:7:2.74:12,3,0	./.	0/0:41,0:10:6.02:0,6,78	0/1:10,0:17:15.37:15,0,41	1/1:8,2:15:7.01:29,7,0	1/1:35,4:44:33.27:426,33,0	0/1:20,0:19:31.38:110,0,31	0/1:12,0:24:40.35:79,0,40	1/1:20,1:20:27.31:411,27,0	1/1:9,1:11:8.39:126,8,0	0/1:18,0:30:95.51:96,0,105	0/1:27,7:35:5.63:645,0,6	1/1:11,10:27:23.10:339,23,0	1/1:9,6:16:11.05:98,11,0	0/1:14,0:17:33.86:34,0,92	0/1:8,0:23:52.22:93,0,52	1/1:10,9:22:20.98:437,21,0	1/1:13,3:17:29.36:415,29,0	0/1:14,5:18:34.98:113,0,35	0/1:38,14:62:58.06:221,0,58	0/1:8,11:21:0.11:0,0,0	0/1:8,0:22:65.01:78,0,65	1/1:17,0:28:7.29:44,7,0	0/1:14,4:21:27.49:292,0,27	0/1:20,2:22:8.92:395,0,9	1/1:5,7:10:21.07:465,21,0	1/1:9,0:10:8.76:89,9,0
chr10	35423665	.	ACAT	A	1605.03	PASS	AB=0.984;AC=34;AF=0.630;AN=54;BaseQRankSum=3.917;DP=572;FS=1.641;HRun=0;HaplotypeScore=164.1547;InbreedingCoeff=0.2473;MQ=38.44;MQ0=29;MQRankSum=-1.870;QD=5.40;ReadPosRankSum=3.917;VQSLOD=2.2375;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:22,2:23:12.90:13,0,19	1/1:8,0:8:6.32:57,6,0	0/0:96,0:11:25.59:0,26,309	0/0:105,0:13:28.39:0,28,291	0/1:18,0:18:0:0,0,0	0/0:15,0:15:1.82:0,2,5	0/1:28,0:28:15.19:69,0,15	1/1:11,0:11:22.73:284,23,0	1/1:17,0:17:1.11:3,1,0	1/1:13,0:13:24.57:302,25,0	0/1:9,0:9:4.25:4,0,18	1/1:23,0:20:15.82:82,16,0	1/1:14,1:15:11.53:111,12,0	0/1:17,1:18:15.04:32,0,15	0/0:19,0:19:3.63:0,4,9	1/1:16,1:16:7.40:25,7,0	1/1:6,0:6:10.32:71,10,0	0/1:7,0:7:8.80:109,0,9	1/1:3,0:3:9.03:124,9,0	0/0:9,1:10:2.31:0,2,23	0/1:20,0:17:10.27:10,0,32	1/1:11,0:11:0.57:15,1,0	./.	0/0:14,0:11:0:0,0,0	0/1:15,0:14:0:0,0,0	1/1:14,1:15:3.80:235,4,0	1/1:13,1:13:7.19:136,7,0	1/1:4,1:5:4.70:72,5,0
chr10	35423666	.	CATG	C	2347.78	PASS	AB=0.979;AC=45;AF=0.833;AN=54;BaseQRankSum=2.064;DP=572;FS=2.346;HRun=0;HaplotypeScore=161.7675;InbreedingCoeff=0.5141;MQ=41.08;MQ0=30;MQRankSum=0.456;QD=6.97;ReadPosRankSum=2.385;VQSLOD=2.8141;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:23,1:23:8.87:83,9,0	1/1:7,1:8:8.95:79,9,0	0/0:95,0:11:25.55:0,26,239	0/0:108,0:15:22.70:0,23,285	0/1:17,0:17:0:0,0,0	1/1:12,2:14:2.68:11,3,0	1/1:28,0:28:18.95:182,19,0	1/1:11,0:11:29.35:215,29,0	1/1:16,1:17:2.84:20,3,0	1/1:12,1:13:32.73:286,33,0	1/1:7,1:8:5.88:41,6,0	1/1:23,0:20:17.74:163,18,0	1/1:15,0:15:22.95:202,23,0	1/1:18,0:18:8.77:67,9,0	1/1:17,2:19:9.97:49,10,0	0/1:17,0:16:3.42:28,0,3	1/1:5,1:6:11.94:117,12,0	1/1:7,0:7:17.62:132,18,0	1/1:3,0:3:8.97:69,9,0	1/1:9,0:9:5.85:36,6,0	1/1:20,0:17:5.85:57,6,0	1/1:11,0:11:8.75:73,9,0	./.	0/0:12,2:11:0:0,0,0	0/1:13,1:14:0:0,0,0	1/1:15,0:15:39.43:278,39,0	1/1:14,0:13:25.43:238,25,0	1/1:5,0:5:5.72:50,6,0
chr10	35423667	.	AT	A	3421.27	PASS	AB=0.563;AC=46;AF=0.852;AN=54;BaseQRankSum=1.389;DP=559;FS=4.034;HRun=1;HaplotypeScore=151.8290;InbreedingCoeff=0.5757;MQ=41.07;MQ0=30;MQRankSum=1.233;QD=10.66;ReadPosRankSum=2.365;VQSLOD=2.0522;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,13:22:8.92:87,9,0	1/1:2,4:8:9.03:121,9,0	0/0:98,0:13:28.56:0,29,313	0/0:110,0:15:23.53:0,24,253	0/1:0,16:16:0:0,0,0	1/1:2,6:14:2.97:20,3,0	1/1:1,18:25:18.63:225,19,0	1/1:0,8:11:30:355,30,0	1/1:3,13:16:3.01:35,3,0	1/1:1,7:13:38.91:431,39,0	1/1:1,2:8:6.01:64,6,0	1/1:6,16:19:17.46:178,17,0	1/1:1,7:14:20.50:190,21,0	1/1:1,6:17:9:98,9,0	1/1:2,7:19:8.87:76,9,0	1/1:1,15:15:11.62:167,12,0	1/1:1,5:6:12.04:164,12,0	1/1:0,2:6:17.74:161,18,0	1/1:0,3:3:9.03:124,9,0	1/1:2,2:9:5.98:48,6,0	1/1:5,7:14:5.96:44,6,0	1/1:2,6:11:9:98,9,0	./.	0/0:7,7:11:0:0,0,0	0/1:2,9:14:0:0,0,1	1/1:2,7:14:38.91:419,39,0	1/1:2,7:13:26.57:250,27,0	1/1:1,2:4:8.93:64,9,0
chr10	35423668	.	T	TA	2800.65	PASS	AB=1.000;AC=41;AF=0.820;AN=50;BaseQRankSum=-0.538;DP=559;FS=3.633;HRun=1;HaplotypeScore=152.1306;InbreedingCoeff=0.5869;MQ=40.78;MQ0=30;MQRankSum=0.606;QD=10.41;ReadPosRankSum=-0.252;VQSLOD=1.5942;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:21:5.02:63,5,0	1/1:7,0:7:5.24:58,5,0	0/0:101,0:14:31.27:0,31,298	0/0:111,0:15:19.07:0,19,216	0/1:16,0:16:0:0,0,0	1/1:14,0:14:3.01:46,3,0	1/1:25,0:25:12.23:173,12,0	1/1:11,0:11:29.96:302,30,0	0/0:14,2:16:1.82:0,2,5	1/1:13,0:13:33.96:388,34,0	1/1:7,0:7:6.02:89,6,0	1/1:17,5:19:16.65:119,17,0	1/1:14,0:14:16.94:244,17,0	1/1:17,0:17:8.99:102,9,0	1/1:19,0:19:10.73:141,11,0	0/0:16,0:15:3.38:0,3,9	1/1:6,0:6:7.17:58,7,0	1/1:6,0:6:13.73:152,14,0	1/1:3,0:3:8.94:65,9,0	1/1:8,0:8:6.02:90,6,0	1/1:16,0:13:5.98:65,6,0	1/1:11,0:11:8.87:59,9,0	./.	./.	./.	1/1:14,0:14:30.18:375,30,0	1/1:14,0:13:23.53:283,24,0	1/1:4,0:4:4.16:61,4,0
chr10	35423674	.	AT	A	2194.59	PASS	AB=0.713;AC=39;AF=0.750;AN=52;BaseQRankSum=4.384;DP=546;FS=7.751;HRun=1;HaplotypeScore=146.3462;InbreedingCoeff=0.4233;MQ=39.66;MQ0=34;MQRankSum=-0.139;QD=8.34;ReadPosRankSum=4.875;VQSLOD=0.9963;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,17:17:0.83:2,1,0	1/1:0,7:7:9.02:94,9,0	0/0:112,0:15:29.75:0,30,374	0/0:118,0:16:30.38:0,30,363	0/1:16,0:17:0:0,0,0	0/1:1,11:12:0:0,0,0	1/1:4,20:24:10.01:101,10,0	0/1:1,9:10:20.75:259,0,21	1/1:14,2:16:2.84:14,3,0	1/1:1,13:13:39.09:437,39,0	1/1:0,5:6:3.01:36,3,0	1/1:15,5:19:16.28:121,16,0	1/1:0,13:13:17.68:177,18,0	1/1:1,15:16:6.01:66,6,0	0/1:1,14:15:0.12:0,0,0	0/1:15,0:14:4.62:5,0,22	1/1:6,0:6:7.67:65,8,0	1/1:0,5:5:15.02:153,15,0	1/1:2,3:4:9.02:93,9,0	1/1:0,7:7:3.01:35,3,0	./.	1/1:0,8:9:3:28,3,0	./.	0/0:7,5:11:0:0,0,0	0/0:1,14:14:0.47:0,0,1	1/1:1,12:13:35.43:346,35,0	1/1:1,12:12:23.62:232,24,0	1/1:0,3:3:6.01:62,6,0
chr10	35423675	.	T	TA	874.79	PASS	AB=0.937;AC=33;AF=0.717;AN=46;BaseQRankSum=3.086;DP=547;FS=1.721;HRun=1;HaplotypeScore=148.3503;InbreedingCoeff=0.2049;MQ=39.33;MQ0=40;MQRankSum=0.291;QD=3.47;ReadPosRankSum=1.005;VQSLOD=0.2164;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:18,0:17:0:0,0,0	0/1:7,0:7:2.63:17,0,3	0/0:112,0:15:35.43:0,35,291	0/0:120,0:16:19.21:0,19,278	0/1:1,15:16:0:0,0,0	./.	0/1:21,2:23:5.53:8,0,6	0/1:12,0:11:33.22:33,0,38	1/1:2,12:14:3.01:40,3,0	1/1:14,0:13:10.97:81,11,0	1/1:7,0:6:2.96:19,3,0	1/1:5,12:17:18.47:221,18,0	1/1:13,0:13:7.04:64,7,0	1/1:17,0:17:5.37:34,5,0	0/1:16,0:15:0.01:0,0,0	1/1:2,12:14:4.45:93,4,0	1/1:1,4:5:12.04:188,12,0	1/1:5,0:5:2.82:18,3,0	0/1:7,0:4:3.20:14,0,3	1/1:7,0:7:2.68:11,3,0	./.	1/1:9,0:9:3.01:41,3,0	./.	./.	./.	0/1:13,0:12:9.99:13,0,10	1/1:13,0:12:13.87:92,14,0	0/1:3,0:3:0.46:10,0,0
chr10	35423676	.	GAC	G	1226.88	PASS	AB=0.833;AC=28;AF=0.667;AN=42;BaseQRankSum=1.579;DP=565;FS=26.777;HRun=0;HaplotypeScore=149.6675;InbreedingCoeff=0.4741;MQ=37.43;MQ0=45;MQRankSum=-0.536;QD=6.67;ReadPosRankSum=3.968;VQSLOD=1.6379;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:3,15:17:2.04:6,2,0	1/1:3,5:7:8.97:74,9,0	0/0:110,0:14:32.34:0,32,363	0/0:118,0:16:36.70:0,37,452	./.	./.	1/1:7,17:24:8.02:77,8,0	0/1:7,7:13:27.41:142,0,27	0/0:17,0:16:1.25:0,1,3	1/1:8,7:14:4:222,4,0	1/1:5,3:6:2.99:23,3,0	0/1:18,0:17:2.79:3,0,46	1/1:1,12:13:12.18:94,12,0	1/1:4,13:17:5.75:39,6,0	./.	0/0:16,0:14:2.51:0,3,30	0/0:6,0:5:8.28:0,8,49	1/1:2,3:5:13.40:94,13,0	1/1:4,3:4:9.01:86,9,0	1/1:1,7:8:3:27,3,0	./.	0/0:2,7:9:0.47:0,0,1	./.	./.	./.	1/1:4,9:12:32.82:294,33,0	1/1:1,12:12:13:128,13,0	1/1:0,3:3:6.01:56,6,0
chr10	35423682	.	CAG	C	449.41	PASS	AB=0.985;AC=30;AF=0.652;AN=46;BaseQRankSum=4.239;DP=594;FS=15.325;HRun=0;HaplotypeScore=151.5053;InbreedingCoeff=0.0910;MQ=37.17;MQ0=51;MQRankSum=-1.539;QD=1.58;ReadPosRankSum=3.455;VQSLOD=1.6100;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:22:2.90:16,3,0	1/1:10,0:9:7.66:31,8,0	0/0:90,1:12:16.04:0,16,278	0/0:105,1:16:36.09:0,36,385	./.	./.	1/1:24,0:24:6.37:25,6,0	0/1:21,0:19:19.33:19,0,151	1/1:16,0:15:2.22:7,2,0	0/1:13,1:13:51.17:115,0,51	1/1:11,0:8:2.04:6,2,0	0/1:16,1:16:15.17:15,0,23	1/1:14,0:14:7.90:26,8,0	1/1:20,0:20:4.87:17,5,0	0/1:17,0:16:0:0,0,0	0/1:21,0:18:11.68:12,0,13	0/1:7,0:5:6.19:6,0,7	0/1:5,0:5:1.88:23,0,2	0/1:16,0:11:21.92:22,0,29	1/1:13,0:12:2.49:9,2,0	./.	0/0:11,1:10:0.47:0,0,1	./.	./.	0/0:16,0:14:0:0,0,0	1/1:12,2:12:27.67:156,28,0	1/1:14,0:13:1.96:37,2,0	1/1:6,0:5:7.78:37,8,0
chr10	35423684	.	GAC	G	105.52	PASS	AB=0.940;AC=17;AF=0.386;AN=44;BaseQRankSum=3.690;DP=598;FS=3.294;HRun=0;HaplotypeScore=152.4765;InbreedingCoeff=0.2990;MQ=37.29;MQ0=53;MQRankSum=0.840;QD=0.56;ReadPosRankSum=1.975;VQSLOD=2.8434;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:22:3:25,3,0	0/1:9,0:8:4.52:5,0,24	0/0:83,0:12:20.93:0,21,271	0/0:99,0:16:25.77:0,26,321	./.	./.	0/0:24,0:24:7.66:0,8,26	0/0:23,0:19:33.63:0,34,387	1/1:13,4:16:2.99:24,3,0	0/1:15,0:13:2.96:3,0,113	0/0:12,0:9:2.50:0,2,9	0/1:14,4:17:3.39:31,0,3	0/0:14,0:14:10.67:0,11,46	0/1:19,1:20:3.60:11,0,4	0/1:19,1:18:0:0,0,0	1/1:16,5:18:3.13:36,3,0	1/1:6,1:5:11.07:63,11,0	0/0:5,0:5:7.13:0,7,38	0/0:20,0:14:30.76:0,31,224	1/1:13,0:12:1.25:3,1,0	./.	./.	./.	./.	0/0:15,1:14:0:0,0,0	0/1:16,0:14:3.93:4,0,72	0/0:14,0:13:14.30:0,14,78	0/1:5,1:5:15.68:29,0,16
chr10	35423688	.	C	CAG	292.31	PASS	AB=0.976;AC=12;AF=0.261;AN=46;BaseQRankSum=3.370;DP=586;FS=0.957;HRun=0;HaplotypeScore=152.2884;InbreedingCoeff=0.5458;MQ=37.73;MQ0=53;MQRankSum=1.112;QD=2.15;ReadPosRankSum=0.463;VQSLOD=2.7428;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:21:2.37:0,2,8	0/0:11,0:9:12.04:0,12,167	0/0:72,0:11:20.93:0,21,264	0/0:91,0:15:21:0,21,329	0/1:17,2:17:0:0,0,0	./.	0/0:24,0:24:7.73:0,8,62	0/0:26,0:21:41.50:0,41,505	1/1:12,4:15:3.01:40,3,0	0/0:16,0:13:27.83:0,28,412	0/0:12,0:9:3.01:0,3,45	1/1:13,4:16:14.24:153,14,0	0/0:14,0:14:11.76:0,12,130	0/1:19,0:19:10.97:11,0,21	0/1:20,0:18:0:0,0,0	1/1:15,6:18:3.95:38,4,0	1/1:6,2:6:17.61:180,18,0	0/0:5,0:5:2.77:0,3,88	0/0:22,0:16:32.71:0,33,320	0/0:14,0:13:2.10:0,2,7	./.	./.	./.	./.	0/1:16,0:14:0:0,0,0	0/0:20,0:17:38.83:0,39,403	0/0:15,0:14:19.08:0,19,206	0/0:6,0:5:11.62:0,12,93
chr10	35423692	.	GACAC	G	104.17	PASS	AB=0.958;AC=11;AF=0.220;AN=50;BaseQRankSum=3.210;DP=562;FS=4.544;HRun=0;HaplotypeScore=146.2424;InbreedingCoeff=0.3950;MQ=38.44;MQ0=53;MQRankSum=0.821;QD=0.54;ReadPosRankSum=1.001;VQSLOD=2.6131;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:21:1.82:0,2,5	0/0:11,0:9:12.04:0,12,184	0/0:59,0:10:9.03:0,9,171	0/1:81,0:13:6.68:7,0,116	0/1:16,2:16:0:0,0,0	./.	0/0:23,0:24:3.44:0,3,51	0/0:26,0:20:43.64:0,44,875	1/1:15,2:16:3.01:35,3,0	0/0:16,0:13:36.05:0,36,539	0/0:12,0:9:3.01:0,3,51	1/1:16,1:16:1.51:63,2,0	0/0:13,0:13:8.86:0,9,125	0/0:15,0:15:2.94:0,3,18	0/1:17,0:15:0.02:0,0,0	0/1:21,0:19:1.04:1,0,1	1/1:8,0:6:6.69:103,7,0	0/0:5,0:5:11.92:0,12,124	0/0:24,0:18:47.45:0,47,639	0/0:13,0:12:3.01:0,3,34	./.	./.	0/1:13,1:13:0:0,0,0	0/0:15,0:12:0:0,0,0	0/0:16,0:14:0:0,0,0	0/0:22,0:19:44.93:0,45,633	0/0:13,0:12:1.91:0,2,188	0/0:7,0:5:12.04:0,12,211
chr10	35423696	.	C	CAG	316.34	PASS	AB=1.000;AC=14;AF=0.292;AN=48;BaseQRankSum=3.680;DP=550;FS=12.200;HRun=0;HaplotypeScore=140.1444;InbreedingCoeff=0.4130;MQ=35.88;MQ0=52;MQRankSum=-0.325;QD=1.44;ReadPosRankSum=-0.844;VQSLOD=1.9500;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:23:3:0,3,26	0/0:13,0:11:12.04:0,12,172	0/0:48,0:6:9.03:0,9,138	0/1:66,0:12:10.23:10,0,93	0/1:19,0:17:0:0,0,0	./.	0/0:23,0:23:2.96:0,3,42	0/0:24,0:17:45.85:0,46,584	1/1:16,1:16:3.01:57,3,0	0/0:16,0:13:39.06:0,39,518	0/0:12,0:9:3.01:0,3,43	1/1:19,1:18:7.30:132,7,0	0/0:14,0:14:11.93:0,12,129	0/0:14,0:14:2.94:0,3,18	0/1:17,0:15:0:0,0,0	1/1:18,3:18:8.64:36,9,0	1/1:6,1:6:5.75:193,6,0	0/0:4,0:4:11.92:0,12,123	0/0:24,0:18:23.29:0,23,423	0/0:13,0:12:3:0,3,33	./.	./.	./.	0/1:19,0:15:0:0,0,0	0/1:17,0:15:0:0,0,0	0/0:23,0:20:49.30:0,49,538	0/1:13,0:12:15.50:16,0,139	0/0:7,0:5:11.96:0,12,136
chr10	35423700	.	CACAG	C	204.08	PASS	AB=0.968;AC=15;AF=0.300;AN=50;BaseQRankSum=3.925;DP=524;FS=1.038;HRun=0;HaplotypeScore=128.8382;InbreedingCoeff=0.4404;MQ=35.17;MQ0=52;MQRankSum=-0.442;QD=1.06;ReadPosRankSum=0.189;VQSLOD=2.2095;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:24:2.74:12,3,0	0/0:13,0:11:12.03:0,12,142	0/0:37,0:5:9.03:0,9,156	0/1:53,0:9:8.61:9,0,71	0/1:17,2:17:0:0,0,0	0/0:18,0:15:0.47:0,0,1	0/0:21,0:21:6.26:0,6,80	0/0:26,0:18:47.98:0,48,848	1/1:15,2:16:2.94:18,3,0	0/0:16,0:13:33.68:0,34,476	0/0:13,0:10:5.50:0,6,47	1/1:13,5:17:11.23:117,11,0	0/0:14,0:14:6.81:0,7,109	./.	1/1:16,0:14:0.47:1,0,0	1/1:18,2:17:3.45:38,3,0	1/1:7,1:6:15.20:125,15,0	0/0:4,0:4:2.79:0,3,83	0/0:26,0:20:41.90:0,42,496	0/0:13,0:12:3.01:0,3,37	./.	./.	0/0:14,3:16:0:0,0,0	0/0:18,2:16:0:0,0,1	0/0:17,0:15:0.89:0,1,2	0/0:20,0:17:44.12:0,44,574	0/1:12,0:11:18.18:18,0,173	0/0:7,0:5:11.98:0,12,177
chr10	35423734	.	CAT	C	1570.68	PASS	AB=0.931;AC=36;AF=0.692;AN=52;BaseQRankSum=-2.736;DP=386;FS=1.485;HRun=0;HaplotypeScore=75.0057;InbreedingCoeff=0.3424;MQ=31.61;MQ0=58;MQRankSum=-0.279;QD=5.12;ReadPosRankSum=-1.561;VQSLOD=2.2261;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:20,0:17:0:0,0,0	0/1:8,0:6:7.44:13,0,7	./.	./.	0/0:17,0:16:0.47:0,0,1	1/1:14,0:11:7.12:42,7,0	1/1:12,1:13:8.96:86,9,0	1/1:18,0:8:17.06:115,17,0	0/1:23,0:21:3.13:71,0,3	1/1:13,0:11:21.70:191,22,0	0/0:9,0:6:0.89:0,1,2	1/1:15,0:14:8.11:38,8,0	1/1:5,6:10:6.38:65,6,0	1/1:12,0:12:5.85:45,6,0	1/1:16,0:12:9:89,9,0	0/0:19,0:17:2.21:0,2,15	1/1:8,2:8:4.75:31,5,0	0/1:10,1:9:16.12:171,0,16	0/0:9,0:4:4.97:0,5,19	1/1:12,1:11:11.48:95,11,0	1/1:9,19:21:3.01:45,3,0	0/1:8,8:12:0:0,0,0	0/1:17,0:15:0:0,0,0	0/0:25,0:19:2.87:0,3,23	1/1:14,1:14:14.91:176,15,0	1/1:19,1:12:27.17:230,27,0	1/1:8,0:7:12.72:108,13,0	1/1:5,1:4:8.91:82,9,0
chr10	35423740	.	C	CAT	337.73	PASS	AB=0.975;AC=9;AF=0.173;AN=52;BaseQRankSum=0.387;DP=412;FS=8.241;HRun=0;HaplotypeScore=92.2500;InbreedingCoeff=0.3495;MQ=33.67;MQ0=59;MQRankSum=0.560;QD=2.70;ReadPosRankSum=2.026;VQSLOD=1.1095;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:20,0:16:0:0,0,0	0/0:8,0:5:3:0,3,29	./.	./.	0/0:16,0:15:2.97:0,3,20	0/0:14,0:11:6.48:0,6,37	0/0:16,0:16:11.88:0,12,85	0/0:15,0:8:17.52:0,18,114	1/1:23,2:23:15.19:244,15,0	0/0:18,0:15:38.65:0,39,273	0/0:8,0:5:3.01:0,3,34	0/1:15,0:14:5.56:6,0,8	0/0:10,0:9:6.42:0,6,51	0/0:14,0:14:5.15:0,5,30	0/0:17,0:13:10.22:0,10,74	0/1:18,3:19:32.50:93,0,32	1/1:12,1:11:8.30:111,8,0	0/0:12,0:10:21.74:0,22,185	0/0:12,0:7:7.66:0,8,38	0/0:12,0:10:1.01:0,1,48	0/0:32,0:25:2.70:0,3,30	0/1:15,0:11:0:0,0,0	0/1:16,0:14:0:0,0,0	0/0:20,7:24:5.49:0,5,48	0/0:15,0:14:16.45:0,16,145	0/0:18,0:11:27.43:0,27,190	0/0:9,0:8:12.80:0,13,93	0/0:7,0:5:8.90:0,9,66
chr10	35423830	.	ACACAC	A	6565.93	PASS	AC=48;AF=0.889;AN=54;BaseQRankSum=-1.632;DP=289;FS=1.230;HRun=0;HaplotypeScore=65.4446;InbreedingCoeff=0.5337;MQ=76.79;MQ0=0;MQRankSum=-5.398;QD=25.65;ReadPosRankSum=2.414;VQSLOD=4.0508;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:16,1:17:6.02:72,6,0	1/1:2,0:2:3.01:46,3,0	0/0:14,0:12:27.09:0,27,595	0/0:12,0:12:35.22:0,35,581	1/1:12,0:12:9.36:146,9,0	1/1:1,11:12:5.59:103,6,0	1/1:11,5:17:42.03:723,42,0	1/1:12,0:12:30.03:423,30,0	1/1:16,0:16:20.94:333,21,0	1/1:1,6:7:11.87:188,12,0	0/0:5,0:5:0.47:0,0,1	1/1:9,0:9:21.54:339,22,0	1/1:0,9:9:2.75:66,3,0	1/1:0,0:4:3.01:49,3,0	1/1:0,10:11:5.75:115,6,0	1/1:8,0:8:15.05:232,15,0	1/1:22,2:24:44.18:739,44,0	1/1:8,4:13:38.60:645,39,0	1/1:1,5:6:18.06:275,18,0	1/1:5,0:5:9.84:121,10,0	1/1:19,1:20:26.65:432,27,0	1/1:0,8:10:14.20:255,14,0	./.	1/1:16,3:21:41.64:677,42,0	1/1:2,3:5:2.17:15,2,0	1/1:11,0:11:24.08:376,24,0	1/1:1,0:1:3.01:49,3,0	1/1:0,0:4:9.03:146,9,0
chr10	35423831	.	CACA	C	4833.52	PASS	AC=48;AF=0.889;AN=54;BaseQRankSum=-0.860;DP=288;FS=2.675;HRun=0;HaplotypeScore=65.1985;InbreedingCoeff=0.5444;MQ=79.78;MQ0=0;MQRankSum=-5.435;QD=19.10;ReadPosRankSum=2.882;VQSLOD=4.0455;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,14:17:6.02:72,6,0	1/1:1,0:1:3.01:46,3,0	0/0:15,0:13:27.08:0,27,527	0/0:13,0:13:38.20:0,38,561	1/1:12,0:12:9.22:59,9,0	1/1:11,1:12:5.59:74,6,0	1/1:16,1:17:42.03:566,42,0	1/1:1,11:12:30.04:423,30,0	1/1:17,0:17:20.35:130,20,0	1/1:7,0:7:12.51:161,13,0	0/0:0,5:5:0.47:0,0,1	1/1:9,0:9:20.96:135,21,0	1/1:9,0:9:3.01:38,3,0	1/1:4,0:4:3.01:37,3,0	1/1:11,0:11:5.72:74,6,0	1/1:8,0:8:14.53:87,15,0	1/1:23,0:23:43.26:303,43,0	1/1:14,0:14:39.05:528,39,0	1/1:5,1:6:18.06:246,18,0	1/1:0,5:5:9.84:120,10,0	1/1:16,2:18:27.07:410,27,0	1/1:10,0:10:14.10:185,14,0	./.	1/1:14,6:20:42.61:597,43,0	1/1:5,0:5:2.02:8,2,0	1/1:0,11:11:24.08:376,24,0	1/1:1,0:1:3.01:49,3,0	1/1:4,0:4:9.03:111,9,0
chr10	35423832	.	ACACCC	A	5021.98	PASS	AC=46;AF=0.852;AN=54;BaseQRankSum=1.107;DP=283;FS=8.654;HRun=0;HaplotypeScore=69.4496;InbreedingCoeff=0.5662;MQ=78.81;MQ0=0;MQRankSum=-4.943;QD=20.58;ReadPosRankSum=4.433;VQSLOD=3.2454;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:17:4.92:31,5,0	1/1:1,0:1:2.98:21,3,0	0/0:14,0:12:30.06:0,30,466	0/0:13,0:13:38.75:0,39,498	1/1:0,11:11:14.89:231,15,0	1/1:12,0:12:5.57:66,6,0	1/1:15,0:15:35.92:412,36,0	1/1:12,0:12:23.83:180,24,0	1/1:1,15:16:21.07:458,21,0	1/1:7,0:7:10.43:105,10,0	0/0:5,0:5:0.47:0,0,1	1/1:3,7:10:24.05:483,24,0	1/1:9,0:9:2.60:39,3,0	1/1:4,0:4:2.91:32,3,0	1/1:11,0:11:5.88:80,6,0	1/1:1,7:8:15.05:298,15,0	1/1:3,20:23:48.08:997,48,0	1/1:14,0:14:18.56:328,19,0	1/1:6,0:6:17.93:154,18,0	1/1:5,0:5:8.97:60,9,0	1/1:17,0:17:25.04:213,25,0	1/1:10,0:10:14.14:164,14,0	./.	1/1:20,0:20:39.40:368,39,0	0/0:5,0:5:0.44:0,0,1	1/1:11,0:11:23.89:181,24,0	1/1:1,0:1:2.99:23,3,0	1/1:4,0:4:9.02:97,9,0
chr10	35424677	.	ACCTCACT	A	8085.32	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=15.166;DP=617;FS=4.054;HRun=0;HaplotypeScore=159.2309;InbreedingCoeff=0.9991;MQ=90.21;MQ0=0;MQRankSum=-15.088;QD=63.66;ReadPosRankSum=2.652;VQSLOD=5.1912;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,129,5070	0/0:17,0:17:48.15:0,48,1843	0/0:33,0:33:93.16:0,93,3075	0/0:30,0:29:37:0,37,2371	1/1:0,26:26:69.24:1791,69,0	0/0:18,0:18:54.17:0,54,2020	0/0:29,0:29:81.26:0,81,3134	0/0:25,0:25:72.24:0,72,2777	1/1:4,17:21:57.16:1387,57,0	0/0:32,0:32:93.31:0,93,3630	0/0:15,0:15:45.15:0,45,1769	1/1:2,15:17:45.15:1174,45,0	0/0:27,0:27:72.23:0,72,2788	0/0:19,0:19:57.20:0,57,2280	0/0:25,0:25:69.24:0,69,2786	1/1:1,15:17:45.15:1174,45,0	1/1:5,12:17:37.36:887,37,0	0/0:19,0:19:57.20:0,57,2191	0/0:15,0:15:45.15:0,45,1664	0/0:14,0:14:42.13:0,42,1600	0/0:40,0:40:99:0,120,4537	0/0:16,0:16:45.15:0,45,1728	1/1:2,12:14:30.10:790,30,0	1/1:4,11:15:36.58:883,37,0	0/0:20,0:19:60.21:0,60,2261	0/0:26,0:26:78.27:0,78,3101	0/0:19,0:18:57.18:0,57,2180	0/0:8,0:8:21.07:0,21,848
chr10	35424769	.	CA	C	1015.52	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=14.172;DP=585;FS=5.353;HRun=1;HaplotypeScore=74.8761;InbreedingCoeff=0.8898;MQ=80.26;MQ0=0;MQRankSum=-3.455;QD=7.36;ReadPosRankSum=4.740;VQSLOD=1.1420;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:93.25:0,93,1312	0/0:9,0:9:27.09:0,27,391	0/0:15,0:15:42.03:0,42,483	0/0:16,0:16:41.08:0,41,609	1/1:12,2:14:25.05:137,25,0	0/0:20,0:20:60.18:0,60,858	0/0:24,0:24:66.18:0,66,953	0/0:24,0:24:69.20:0,69,976	1/1:27,0:27:47.53:252,48,0	0/0:21,0:21:60.20:0,60,888	0/0:12,0:12:36.09:0,36,498	1/1:21,3:24:8.33:215,8,0	0/0:16,0:16:45.12:0,45,619	0/0:29,0:29:84.23:0,84,1180	0/0:25,0:25:72.21:0,72,1023	0/1:14,0:14:13.45:76,0,13	1/1:26,1:27:28.60:218,29,0	0/0:22,0:22:63.13:0,63,872	0/0:16,0:16:45.08:0,45,591	0/0:13,0:13:36.11:0,36,518	0/0:52,0:52:99:0,141,2033	0/0:16,0:16:48.15:0,48,679	1/1:12,1:13:28.77:125,29,0	1/1:19,0:19:39.45:180,39,0	0/0:21,0:21:63.20:0,63,904	0/0:26,0:26:75.22:0,75,1065	0/0:28,0:28:78.24:0,78,1132	0/0:10,0:10:30.08:0,30,428
chr10	35424770	.	AC	A	3814.36	PASS	AB=0.520;AC=13;AF=0.232;AN=56;BaseQRankSum=10.841;DP=591;FS=4.014;HRun=6;HaplotypeScore=66.5939;InbreedingCoeff=0.9484;MQ=80.05;MQ0=0;MQRankSum=-2.559;QD=27.05;ReadPosRankSum=4.234;VQSLOD=4.1745;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:87.27:0,87,1130	0/0:9,0:9:27.09:0,27,351	0/0:15,0:15:36.10:0,36,439	0/0:16,0:16:44.32:0,44,538	1/1:11,7:18:33.06:344,33,0	0/0:20,0:20:57.15:0,57,716	0/0:24,0:24:66.19:0,66,840	0/0:25,0:25:66.17:0,66,803	1/1:1,26:27:75.19:805,75,0	0/0:22,0:22:63.19:0,63,794	0/0:13,0:13:33.11:0,33,433	1/1:6,18:24:63.15:675,63,0	0/0:16,0:16:45.13:0,45,564	0/0:29,0:29:84.25:0,84,1076	0/0:25,0:25:69.22:0,69,895	0/1:1,12:13:0.38:348,0,0	1/1:3,24:27:72.18:773,72,0	0/0:22,0:22:63.18:0,63,801	0/0:16,0:16:42.09:0,42,509	0/0:12,0:12:33.11:0,33,434	0/0:52,0:52:99:0,144,1821	0/0:16,0:16:48.16:0,48,629	1/1:2,11:13:36.09:386,36,0	1/1:0,19:19:45.11:482,45,0	0/0:22,0:22:60.17:0,60,772	0/0:26,0:26:66.21:0,66,867	0/0:27,0:27:78.24:0,78,1009	0/0:10,0:10:27.09:0,27,355
chr10	35425087	.	TA	T	2558.74	PASS	AB=0.888;AC=18;AF=0.321;AN=56;BaseQRankSum=7.075;DP=552;FS=2.227;HRun=12;HaplotypeScore=65.9726;InbreedingCoeff=0.8522;MQ=82.11;MQ0=0;MQRankSum=1.058;QD=13.19;ReadPosRankSum=3.609;VQSLOD=4.0522;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,23:28:59.76:464,60,0	0/0:6,0:6:18.04:0,18,183	0/0:23,0:20:9.83:0,10,129	0/1:18,3:18:11.24:11,0,66	1/1:3,17:21:43.61:330,44,0	0/0:20,0:20:48.08:0,48,480	0/0:13,0:15:42.08:0,42,426	0/0:29,1:30:60.07:0,60,586	1/1:3,15:18:41.82:325,42,0	0/0:26,0:26:51.08:0,51,510	0/0:6,0:6:15.01:0,15,145	1/1:6,13:19:46.72:344,47,0	0/0:16,0:16:40.11:0,40,347	0/1:8,1:9:2.23:2,0,151	0/0:16,0:17:38.80:0,39,360	1/1:2,13:15:38.85:302,39,0	1/1:4,20:25:46.85:354,47,0	0/0:27,2:30:28.49:0,28,625	0/0:32,0:32:84.13:0,84,835	0/0:23,1:24:39.88:0,40,580	0/0:14,2:16:12.82:0,13,304	0/0:12,1:14:18.63:0,19,343	1/1:5,15:21:40.87:308,41,0	1/1:0,17:17:41.84:325,42,0	0/0:6,0:21:51.82:0,52,305	0/0:21,1:22:27.85:0,28,457	0/0:33,0:33:76.52:0,77,783	0/0:6,0:6:15.03:0,15,152
chr10	35426072	.	G	GCACACA	2763.87	PASS	AC=36;AF=0.692;AN=52;BaseQRankSum=-5.555;DP=489;FS=0.845;HRun=0;HaplotypeScore=137.1102;InbreedingCoeff=0.6415;MQ=66.10;MQ0=12;MQRankSum=-0.622;QD=9.09;ReadPosRankSum=-4.863;VQSLOD=1.0137;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:25:6.49:0,6,84	1/1:10,0:10:3.01:89,3,0	./.	./.	0/0:10,0:12:3.48:0,3,43	1/1:16,0:16:10.70:193,11,0	1/1:21,0:20:3.53:45,4,0	1/1:23,0:22:12:169,12,0	0/0:10,0:15:18.95:0,19,253	1/1:20,0:20:15.52:342,16,0	1/1:7,2:11:3.01:38,3,0	0/0:7,0:16:23.63:0,24,311	1/1:10,1:12:5.83:116,6,0	1/1:14,2:19:12.04:269,12,0	1/1:10,3:17:5.14:133,5,0	0/0:4,0:9:12.04:0,12,168	0/0:22,0:26:6.02:0,6,84	1/1:9,1:18:12:212,12,0	1/1:11,0:10:6.02:89,6,0	1/1:15,1:16:6.02:190,6,0	1/1:19,0:22:3.01:70,3,0	1/1:23,0:23:2.96:96,3,0	0/0:7,0:9:5.51:0,6,51	0/0:9,0:17:21.05:0,21,275	1/1:13,2:21:14.84:306,15,0	1/1:19,0:17:21.33:290,21,0	1/1:13,4:16:9.03:249,9,0	1/1:5,0:5:3.01:43,3,0
chr10	35426766	.	TG	T	1829.28	PASS	AB=0.970;AC=16;AF=0.286;AN=56;BaseQRankSum=-2.894;DP=568;FS=87.955;HRun=1;HaplotypeScore=96.4320;InbreedingCoeff=0.6818;MQ=78.64;MQ0=3;MQRankSum=-1.122;QD=10.11;ReadPosRankSum=-5.947;VQSLOD=-0.5248;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:78.35:0,78,412	0/0:12,0:12:32.88:0,33,170	0/1:44,3:23:3.57:4,0,219	0/0:36,0:21:1.14:0,1,191	1/1:18,1:19:44.38:321,44,0	0/0:16,0:16:1.86:0,2,96	0/0:17,0:17:35.66:0,36,221	0/0:20,0:20:7.05:0,7,211	1/1:15,0:15:36.93:281,37,0	0/0:19,0:19:27.40:0,27,250	0/0:24,0:24:2.13:0,2,167	1/1:4,6:10:20.04:195,20,0	0/0:18,0:18:3.60:0,4,118	0/0:20,0:20:28.28:0,28,200	0/0:9,0:9:15.81:0,16,91	1/1:11,1:11:34.47:270,34,0	1/1:20,0:20:53.26:328,53,0	0/0:18,0:18:30.92:0,31,136	0/0:20,0:20:31.40:0,31,261	0/0:27,0:27:45.42:0,45,309	0/0:8,0:8:12.77:0,13,51	0/0:16,0:16:34.04:0,34,193	1/1:14,3:17:47.47:431,47,0	1/1:2,15:17:15.03:169,15,0	0/0:25,0:25:2.24:0,2,197	0/0:29,0:29:42.63:0,43,332	0/1:24,0:23:19.76:20,0,115	0/0:13,0:13:26.43:0,26,115
chr10	35426767	.	GTT	G	5451.56	PASS	AB=0.884;AC=40;AF=0.714;AN=56;BaseQRankSum=-8.634;DP=574;FS=4.812;HRun=15;HaplotypeScore=94.9662;InbreedingCoeff=0.6238;MQ=78.92;MQ0=3;MQRankSum=-2.489;QD=13.01;ReadPosRankSum=8.326;VQSLOD=3.7247;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:9,27:40:80.49:647,80,0	1/1:3,8:12:23.55:196,24,0	0/0:48,0:24:46.17:0,46,400	0/0:36,0:21:6.80:0,7,145	0/0:19,0:19:42.28:0,42,403	1/1:4,9:16:23.29:219,23,0	1/1:6,10:17:10.94:148,11,0	1/1:9,7:20:25.34:196,25,0	0/0:15,0:15:20.81:0,21,198	1/1:5,14:19:32.66:308,33,0	1/1:5,15:24:45.49:399,45,0	0/1:9,1:10:14.62:54,0,15	1/1:4,13:18:23.75:255,24,0	1/1:7,12:20:17.64:247,18,0	1/1:2,7:9:17.96:158,18,0	0/0:13,0:12:25.93:0,26,250	0/0:20,0:20:48.09:0,48,542	1/1:2,14:18:35.46:288,35,0	1/1:6,10:20:22.55:270,23,0	1/1:7,16:27:43.78:433,44,0	1/1:0,7:8:5.86:97,6,0	0/1:8,12:20:7.58:198,0,8	0/1:15,0:15:17.55:42,0,18	0/1:17,0:17:14.24:27,0,14	1/1:8,14:25:28.89:264,29,0	1/1:6,17:27:54.83:460,55,0	1/1:7,15:23:29.44:338,29,0	1/1:1,10:13:26.47:209,26,0
chr10	35430714	.	GTCCA	G	4867.03	PASS	AC=14;AF=0.269;AN=52;BaseQRankSum=-13.123;DP=801;FS=0.438;HRun=0;HaplotypeScore=197.4636;InbreedingCoeff=0.9253;MQ=74.70;MQ0=4;MQRankSum=0.902;QD=21.25;ReadPosRankSum=4.491;VQSLOD=4.4663;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:56:54.18:0,54,887	0/0:16,0:16:17.63:0,18,294	./.	./.	1/1:30,0:30:35.95:508,36,0	0/0:14,0:14:18.06:0,18,295	0/0:27,0:27:5.97:0,6,68	0/0:21,0:21:6.01:0,6,60	1/1:39,0:39:54.16:806,54,0	0/0:32,0:32:51.10:0,51,742	0/0:8,0:8:9.03:0,9,132	1/1:15,22:37:54.18:830,54,0	0/0:30,0:29:39:0,39,638	0/0:37,0:37:53.17:0,53,804	0/0:32,0:32:39.13:0,39,650	1/1:19,0:19:42.14:646,42,0	1/1:41,0:41:54.13:785,54,0	0/0:15,0:14:21.07:0,21,355	0/0:21,0:21:9.03:0,9,148	0/0:21,0:21:33.11:0,33,532	0/0:61,0:61:70.08:0,70,1074	0/0:21,0:20:24.55:0,25,350	1/1:7,12:19:27.09:415,27,0	1/1:18,26:44:57.15:876,57,0	0/0:26,0:25:21.07:0,21,348	0/0:26,0:25:45.15:0,45,736	0/0:26,0:25:32.61:0,33,516	0/0:6,0:6:9.03:0,9,145
chr10	35430722	.	A	ATCCG	14608.39	PASS	AB=0.626;AC=33;AF=0.589;AN=56;BaseQRankSum=-13.527;DP=865;FS=1.869;HRun=0;HaplotypeScore=169.0490;InbreedingCoeff=0.6742;MQ=68.21;MQ0=10;MQRankSum=-2.494;QD=25.95;ReadPosRankSum=1.194;VQSLOD=4.9736;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,54:59:54.19:1447,54,0	1/1:0,16:16:20.78:500,21,0	0/0:40,0:21:56.87:0,57,588	0/0:31,0:16:45:0,45,452	0/0:31,0:31:77.53:0,78,736	1/1:1,16:17:18.06:483,18,0	0/1:3,26:29:13.42:121,0,13	0/1:28,0:27:96.95:263,0,97	0/0:37,0:37:99:0,108,1070	1/1:6,31:39:54.33:1333,54,0	1/1:2,7:9:11.66:187,12,0	0/0:37,0:37:84.09:0,84,885	1/1:5,26:30:39.12:1030,39,0	1/1:0,40:41:50.97:1338,51,0	1/1:3,33:41:13.16:930,13,0	0/0:20,0:20:60.11:0,60,654	0/0:43,0:43:99:0,117,1118	0/1:1,15:16:5.11:462,0,5	1/1:6,14:20:44.61:539,45,0	1/1:0,23:24:54.06:919,54,0	1/1:5,63:70:69.17:1795,69,0	1/1:1,27:29:21.07:560,21,0	0/0:18,0:18:45:0,45,460	0/0:45,0:45:99:0,102,1030	0/1:4,23:29:4.90:454,0,5	1/1:0,27:27:78.62:1314,79,0	0/1:5,22:26:2.65:694,0,3	1/1:0,5:6:9.03:239,9,0
chr10	35430739	.	TCCA	T	1622.61	PASS	AB=0.831;AC=7;AF=0.125;AN=56;BaseQRankSum=4.297;DP=863;FS=0.377;HRun=0;HaplotypeScore=196.1850;InbreedingCoeff=-0.1411;MQ=60.32;MQ0=12;MQRankSum=-1.155;QD=6.79;ReadPosRankSum=9.074;VQSLOD=1.6776;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:57:93.31:0,93,1698	0/0:14,0:14:26.19:0,26,516	0/0:35,0:15:38.91:0,39,475	0/0:33,0:14:41.79:0,42,496	0/1:20,14:35:99:274,0,172	0/0:18,0:18:33:0,33,571	0/0:30,0:30:42.14:0,42,629	0/0:37,0:36:99:0,108,1545	0/1:19,15:34:92.21:521,0,92	0/0:39,0:39:99:0,109,1902	0/0:8,0:8:18.06:0,18,330	0/1:34,0:34:53.31:53,0,378	0/0:32,0:31:60.03:0,60,1089	0/0:46,0:46:74.28:0,74,1414	0/0:37,0:37:51.17:0,51,1025	0/1:9,12:21:21.50:403,0,21	0/1:34,13:47:99:454,0,186	0/0:21,0:20:36.12:0,36,669	0/0:12,0:12:36.12:0,36,589	0/0:26,0:26:74.21:0,74,1243	0/0:69,0:68:99:0,114,2101	0/0:28,0:27:46.49:0,46,665	0/1:22,0:22:11.56:12,0,355	0/1:46,0:46:36.15:36,0,641	0/0:22,0:22:24.08:0,24,518	0/0:31,0:30:87.29:0,87,1614	0/0:23,0:22:51.64:0,52,954	0/0:6,0:6:12.04:0,12,233
chr10	35430743	.	TC	T	622.01	PASS	AB=0.705;AC=4;AF=0.071;AN=56;BaseQRankSum=3.395;DP=877;FS=1.023;HRun=2;HaplotypeScore=177.8872;InbreedingCoeff=-0.0779;MQ=60.82;MQ0=12;MQRankSum=1.782;QD=4.54;ReadPosRankSum=5.602;VQSLOD=0.5879;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,99,1298	0/0:14,0:14:26.55:0,27,352	0/0:31,1:15:35.10:0,35,420	0/0:32,0:15:41.74:0,42,486	0/1:21,14:35:99:119,0,288	0/0:19,0:19:36.08:0,36,456	0/0:33,0:33:60.17:0,60,809	0/0:40,0:39:99:0,117,1636	0/1:18,15:33:99:219,0,228	0/0:38,0:38:99:0,108,1509	0/0:9,0:9:21.06:0,21,274	0/0:34,0:34:58.54:0,59,546	0/0:33,0:32:63.18:0,63,766	0/0:45,0:45:80.83:0,81,1020	0/0:38,0:38:51.16:0,51,664	0/1:10,12:22:89.30:176,0,89	0/1:33,14:47:99:218,0,429	0/0:24,0:23:45.06:0,45,565	0/0:10,0:10:30.10:0,30,411	0/0:26,0:26:71.77:0,72,898	0/0:70,0:69:99:0,123,1590	0/0:31,0:30:58.21:0,58,545	0/0:23,0:23:44.32:0,44,490	0/0:48,0:48:87.35:0,87,934	0/0:22,0:22:24.08:0,24,319	0/0:30,0:29:87.26:0,87,1147	0/0:27,0:26:64.07:0,64,828	0/0:7,0:7:15.05:0,15,192
chr10	35431530	.	GT	G	14994.27	PASS	AB=0.545;AC=51;AF=0.911;AN=56;BaseQRankSum=-1.904;DP=624;FS=49.721;HRun=5;HaplotypeScore=134.9657;InbreedingCoeff=0.6919;MQ=59.53;MQ0=5;MQRankSum=-4.895;QD=26.73;ReadPosRankSum=10.816;VQSLOD=0.5222;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,21:25:68.68:750,69,0	1/1:1,7:8:16.78:201,17,0	0/0:28,2:21:50.83:0,51,593	0/0:33,0:23:58.67:0,59,749	1/1:13,33:46:2.93:1017,3,0	1/1:3,12:15:39.11:441,39,0	1/1:2,13:15:30.17:435,30,0	1/1:5,28:32:62.25:905,62,0	1/1:8,18:26:38.46:713,38,0	1/1:8,20:27:35.47:758,35,0	1/1:4,21:25:65.41:739,65,0	1/1:2,20:22:46.37:513,46,0	1/1:3,15:18:19.80:509,20,0	1/1:3,19:22:36.79:632,37,0	1/1:4,18:22:48.86:664,49,0	1/1:0,20:20:51.08:577,51,0	1/1:3,12:14:30.08:338,30,0	1/1:9,20:27:7.02:617,7,0	1/1:5,9:14:36.08:397,36,0	1/1:6,29:35:65.74:1017,66,0	1/1:2,6:8:6.75:189,7,0	1/1:8,16:24:38.47:618,38,0	1/1:0,16:16:48.14:544,48,0	1/1:4,13:17:34.63:406,35,0	1/1:6,19:25:17.81:654,18,0	1/1:3,14:17:27.69:459,28,0	1/1:8,22:30:52.10:749,52,0	0/1:1,5:6:6.23:152,0,6
chr10	35431541	.	TG	T	3738.72	PASS	AB=0.862;AC=23;AF=0.411;AN=56;BaseQRankSum=8.015;DP=632;FS=7.734;HRun=1;HaplotypeScore=176.7250;InbreedingCoeff=-0.6968;MQ=59.73;MQ0=5;MQRankSum=-11.203;QD=7.36;ReadPosRankSum=6.198;VQSLOD=0.6338;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:27,1:28:99:110,0,350	0/1:6,1:7:56.40:56,0,63	0/0:31,0:20:31.77:0,32,515	0/0:39,0:25:67.59:0,68,732	0/1:33,9:42:99:411,0,384	0/1:15,0:15:93.97:94,0,106	0/1:13,3:16:91.64:92,0,252	0/1:26,5:30:99:181,0,639	0/1:18,4:22:99:184,0,263	0/1:21,2:22:99:157,0,274	0/1:22,4:25:99:133,0,264	0/0:20,0:20:28.33:0,28,582	0/1:17,3:20:99:170,0,153	0/1:19,4:23:99:144,0,280	0/1:18,4:22:99:233,0,208	0/1:17,0:17:56.92:57,0,209	0/1:13,0:12:30.39:30,0,154	0/1:21,11:32:99:228,0,266	0/1:15,1:16:99:126,0,167	0/1:29,8:37:99:398,0,203	0/1:9,1:10:71.97:96,0,72	0/1:17,5:22:99:183,0,205	0/0:20,0:20:59.67:0,60,609	0/0:14,0:14:32.87:0,33,486	0/1:19,9:28:99:238,0,305	0/1:14,7:21:99:213,0,235	0/1:22,6:27:99:181,0,415	0/1:5,4:9:23.77:24,0,139
chr10	35431542	.	G	GTTTGT	20590.23	PASS	AB=1.000;AC=47;AF=0.839;AN=56;BaseQRankSum=-2.281;DP=646;FS=11.940;HRun=0;HaplotypeScore=167.0536;InbreedingCoeff=0.8455;MQ=58.95;MQ0=5;MQRankSum=-7.267;QD=36.77;ReadPosRankSum=0.269;VQSLOD=4.2505;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:16,15:35:24.08:642,24,0	1/1:4,3:7:17.97:387,18,0	0/0:32,0:21:24.76:0,25,326	0/1:38,0:24:18.84:19,0,294	1/1:28,15:43:81.09:1708,81,0	1/1:6,9:15:33.03:751,33,0	1/1:12,4:16:12.62:556,13,0	1/1:31,0:30:51.13:742,51,0	1/1:14,9:23:42.06:1013,42,0	1/1:13,10:22:45.11:1083,45,0	1/1:17,9:26:48.09:1024,48,0	0/0:19,0:19:38.33:0,38,685	1/1:12,8:20:42.07:955,42,0	1/1:16,7:23:47.92:935,48,0	1/1:12,10:22:54.09:1216,54,0	1/1:10,8:18:41.91:814,42,0	1/1:10,3:12:28.20:424,28,0	1/1:24,8:32:35.40:1125,35,0	1/1:8,4:16:27.09:628,27,0	1/1:22,17:39:93:2157,93,0	1/1:6,3:10:23.79:424,24,0	1/1:14,7:22:39.05:905,39,0	0/0:21,0:21:36.12:0,36,621	0/0:13,0:14:25.66:0,26,617	1/1:21,7:28:29.10:1072,29,0	1/1:15,6:21:45.10:922,45,0	1/1:23,5:27:51.04:988,51,0	1/1:10,0:10:8.94:101,9,0
chr10	35431798	.	CA	C	8671.86	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=10.369;DP=496;FS=2.649;HRun=1;HaplotypeScore=195.3201;InbreedingCoeff=0.8853;MQ=55.16;MQ0=1;MQRankSum=-10.312;QD=19.94;ReadPosRankSum=4.629;VQSLOD=5.1007;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,24:25:45.93:353,46,0	1/1:1,5:6:17.99:169,18,0	0/0:25,0:22:63.18:0,63,962	0/0:36,0:33:88.79:0,89,1389	1/1:2,13:15:20.91:164,21,0	1/1:0,14:14:31.64:234,32,0	1/1:2,21:23:52.67:467,53,0	1/1:0,22:22:62.10:567,62,0	1/1:0,11:11:29.01:230,29,0	1/1:1,22:22:62.58:550,63,0	1/1:0,17:17:37.71:287,38,0	1/1:0,21:21:50.22:451,50,0	1/1:0,16:16:41.70:340,42,0	1/1:0,19:19:46.26:349,46,0	1/1:0,24:24:58.85:515,59,0	1/1:2,14:16:43.48:332,43,0	1/1:2,16:18:40.54:324,41,0	1/1:1,10:11:30:270,30,0	1/1:2,17:19:54:498,54,0	1/1:2,15:17:44.97:429,45,0	1/1:0,18:18:11.79:83,12,0	1/1:0,10:10:14.92:116,15,0	1/1:0,13:13:26.37:220,26,0	1/1:0,6:6:3.01:42,3,0	1/1:0,19:19:50.63:391,51,0	1/1:2,16:19:53.01:432,53,0	1/1:1,26:27:78.95:708,79,0	1/1:0,6:6:17.97:150,18,0
chr10	35431800	.	GGCAC	G	12186.59	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=9.400;DP=490;FS=3.642;HRun=0;HaplotypeScore=207.5919;InbreedingCoeff=0.8604;MQ=54.85;MQ0=1;MQRankSum=-10.099;QD=28.47;ReadPosRankSum=5.326;VQSLOD=4.3554;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,21:25:37.61:423,38,0	1/1:2,4:6:15.05:204,15,0	0/0:27,0:24:69.09:0,69,1489	0/0:35,0:31:76.44:0,76,1716	1/1:1,13:14:15.03:193,15,0	1/1:0,14:14:33.07:401,33,0	1/1:3,18:21:54.10:643,54,0	1/1:4,17:21:63.14:766,63,0	1/1:1,10:11:25.61:305,26,0	1/1:5,17:21:63.10:749,63,0	1/1:2,15:17:36.08:421,36,0	1/1:3,19:22:51.12:645,51,0	1/1:1,15:16:40.68:520,41,0	1/1:3,15:18:45.09:535,45,0	1/1:3,21:24:54.11:666,54,0	1/1:2,13:15:30.06:371,30,0	1/1:4,15:19:42.09:532,42,0	1/1:0,10:10:30.10:421,30,0	1/1:1,16:17:51.16:701,51,0	1/1:5,13:18:45.11:578,45,0	1/1:4,14:18:9.02:109,9,0	1/1:1,9:10:11.96:157,12,0	1/1:1,12:13:27.07:357,27,0	1/1:2,4:6:2.99:24,3,0	1/1:1,18:19:48.15:621,48,0	1/1:3,16:19:56.48:665,56,0	1/1:4,23:27:75.16:939,75,0	1/1:0,6:6:18.06:241,18,0
chr10	35431804	.	C	CG	4874.10	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=9.547;DP=531;FS=4.762;HRun=1;HaplotypeScore=228.3694;InbreedingCoeff=0.8526;MQ=54.25;MQ0=1;MQRankSum=-10.682;QD=10.35;ReadPosRankSum=6.646;VQSLOD=3.1258;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:24,2:26:24.65:262,25,0	1/1:4,1:5:14.15:112,14,0	0/0:27,0:24:72.11:0,72,877	0/0:33,0:29:66.99:0,67,883	1/1:15,4:19:18.28:137,18,0	1/1:16,0:16:28.59:180,29,0	1/1:24,0:24:26:214,26,0	1/1:26,0:26:15.67:291,16,0	1/1:10,0:11:23.73:162,24,0	1/1:22,0:21:20.98:135,21,0	1/1:18,0:19:25.28:166,25,0	1/1:22,2:24:28.90:237,29,0	1/1:17,0:17:38.67:204,39,0	1/1:19,0:19:42.50:288,42,0	1/1:26,0:26:17.41:194,17,0	1/1:16,3:19:30.07:224,30,0	1/1:19,2:21:42.75:311,43,0	1/1:11,0:11:30.62:156,31,0	1/1:18,0:18:47.26:252,47,0	1/1:17,4:21:14.63:190,15,0	1/1:18,0:18:6.14:21,6,0	1/1:12,1:13:13.05:85,13,0	1/1:14,0:14:25.01:144,25,0	1/1:10,0:10:5.98:64,6,0	1/1:20,0:20:42.53:197,43,0	1/1:20,0:20:32.53:201,33,0	1/1:26,0:26:36.80:381,37,0	1/1:6,0:6:15.86:66,16,0
chr10	35432267	.	CA	C	6012.86	PASS	AB=0.660;AC=49;AF=0.875;AN=56;BaseQRankSum=1.878;DP=494;FS=0.000;HRun=12;HaplotypeScore=60.0647;InbreedingCoeff=0.0941;MQ=71.84;MQ0=0;MQRankSum=-1.558;QD=12.42;ReadPosRankSum=2.582;VQSLOD=4.7352;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,22:30:26.34:387,26,0	1/1:2,4:6:11.95:93,12,0	0/1:10,0:10:8.18:8,0,106	0/0:9,0:9:5.80:0,6,32	1/1:4,0:17:22.38:65,22,0	1/1:2,13:15:8.41:248,8,0	0/1:3,11:14:28.02:176,0,28	1/1:7,17:24:0.38:327,0,0	1/1:3,0:12:18.32:53,18,0	1/1:3,12:15:35.86:279,36,0	1/1:3,18:22:25.40:370,25,0	1/1:0,0:11:20.37:59,20,0	1/1:2,19:21:53.75:418,54,0	1/1:1,11:12:26.89:209,27,0	0/1:5,11:16:19.60:196,0,20	1/1:2,0:14:25.39:88,25,0	1/1:7,0:26:36.65:106,37,0	1/1:3,17:20:41.83:325,42,0	1/1:7,10:18:4.45:208,4,0	1/1:7,17:24:32.07:353,32,0	1/1:3,11:14:5.43:225,5,0	0/1:4,12:16:11.25:217,0,11	1/1:3,1:21:35.36:117,35,0	1/1:2,0:21:36.67:106,37,0	1/1:4,17:23:7.98:309,8,0	1/1:2,20:22:59.76:464,60,0	0/1:8,22:31:20.59:399,0,21	1/1:0,9:9:26.90:209,27,0
chr10	35433470	.	G	GCCCACATTC	33457.76	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-8.512;DP=693;FS=2.060;HRun=0;HaplotypeScore=190.8194;InbreedingCoeff=0.9718;MQ=84.12;MQ0=0;MQRankSum=-13.625;QD=59.64;ReadPosRankSum=2.169;VQSLOD=4.9636;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:36,0:55:31.35:1106,31,0	1/1:2,2:5:6.02:277,6,0	0/0:36,0:36:54.16:0,54,1240	0/0:25,0:25:32.86:0,33,658	1/1:31,0:31:61.45:2382,61,0	1/1:13,11:29:30.10:1282,30,0	1/1:21,6:34:24.08:1096,24,0	1/1:24,4:35:33.10:1039,33,0	1/1:16,0:16:33.11:1359,33,0	1/1:15,12:30:47.98:2027,48,0	1/1:9,10:23:30.10:1379,30,0	0/0:30,0:30:75.19:0,75,1951	1/1:8,13:24:42.14:1926,42,0	1/1:4,12:23:36.12:1658,36,0	1/1:3,14:17:36.12:1653,36,0	1/1:22,0:22:54.19:2216,54,0	1/1:15,0:15:24.08:868,24,0	1/1:7,9:17:33.11:1423,33,0	1/1:19,1:20:27.06:769,27,0	1/1:5,10:18:30.10:1383,30,0	1/1:20,8:33:25.33:1056,25,0	1/1:7,10:17:30.10:1335,30,0	0/0:22,0:22:51.14:0,51,1217	0/0:19,0:19:51.15:0,51,1352	1/1:9,10:22:31.35:1386,31,0	1/1:11,17:30:60.21:2654,60,0	1/1:10,17:33:51.18:2352,51,0	1/1:5,7:12:18.06:831,18,0
chr10	35433479	.	C	CCCCACATTA	28612.14	PASS	AB=1.000;AC=28;AF=0.500;AN=56;BaseQRankSum=-8.742;DP=701;FS=3.832;HRun=0;HaplotypeScore=196.0315;InbreedingCoeff=-0.2744;MQ=82.16;MQ0=0;MQRankSum=-14.097;QD=50.02;ReadPosRankSum=12.366;VQSLOD=3.1107;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:56,0:55:99:798,0,284	0/1:6,0:6:38.96:226,0,39	0/0:32,0:32:75.19:0,75,1654	0/0:25,0:25:47.98:0,48,843	1/1:4,28:34:63.15:2739,63,0	0/1:28,0:28:99:926,0,112	0/1:31,0:31:99:767,0,212	0/1:32,0:32:99:708,0,333	1/1:0,21:22:33.11:1561,33,0	0/1:22,0:22:20.02:1571,0,20	1/1:22,0:22:8.11:1173,8,0	0/0:30,0:30:90.25:0,90,2253	0/1:24,0:24:51.73:1604,0,52	0/1:25,0:25:42.78:1392,0,43	0/1:20,0:20:50.70:1381,0,51	1/1:1,23:25:54.19:2549,54,0	1/1:2,15:18:21.07:956,21,0	0/1:18,0:18:3.87:1148,0,4	0/1:17,0:17:96.12:239,0,96	0/1:19,0:19:40.78:1153,0,41	0/1:36,0:36:99:629,0,105	0/1:19,0:19:51.83:1124,0,52	0/0:21,0:21:57.17:0,57,1426	0/0:21,0:21:57.17:0,57,1514	0/1:24,0:24:83.73:1144,0,84	0/1:30,0:30:92.41:2180,0,92	0/1:31,0:31:43.61:1967,0,44	0/1:13,0:13:85.75:681,0,86
chr10	35434669	.	CGTGTGTGTGT	C	1263.03	PASS	AC=8;AF=0.160;AN=50;BaseQRankSum=5.085;DP=398;FS=10.458;HRun=0;HaplotypeScore=121.8817;InbreedingCoeff=0.7406;MQ=59.04;MQ0=9;MQRankSum=-6.044;QD=18.04;ReadPosRankSum=0.164;VQSLOD=1.8921;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:10,1:11:5.89:0,6,39	0/0:1,0:1:3.01:0,3,133	./.	./.	1/1:7,3:10:6.49:178,6,0	0/0:19,0:20:23.79:0,24,843	0/0:13,0:13:21.06:0,21,881	0/0:25,0:24:15.47:0,15,332	1/1:10,8:17:24.08:692,24,0	0/0:8,0:7:9.03:0,9,263	0/0:9,0:9:12.04:0,12,513	0/0:8,0:17:43.15:0,43,658	0/0:10,0:10:18.06:0,18,759	0/0:10,0:10:21.07:0,21,883	0/0:7,0:8:15.05:0,15,544	1/1:7,7:14:12.04:355,12,0	1/1:26,2:28:5.90:177,6,0	0/0:17,0:19:36.09:0,36,1339	0/0:12,0:11:12.51:0,13,417	0/0:11,0:10:15.05:0,15,722	0/0:43,0:42:51.16:0,51,1865	./.	0/0:6,0:9:8.90:0,9,121	0/0:10,0:15:11.18:0,11,170	0/0:13,0:13:24.07:0,24,921	0/0:12,0:12:12.04:0,12,539	0/0:19,0:19:30.09:0,30,1015	0/0:6,0:6:3.01:0,3,149
chr10	35436432	.	GA	G	308.49	PASS	AB=0.821;AC=16;AF=0.364;AN=44;BaseQRankSum=-0.900;DP=117;FS=5.341;HRun=1;HaplotypeScore=25.9467;InbreedingCoeff=-0.0884;MQ=28.12;MQ0=4;MQRankSum=-0.454;QD=3.63;ReadPosRankSum=1.549;VQSLOD=0.2659;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:7,7:9:11.67:84,0,12	0/0:2,0:1:0.89:0,1,2	./.	./.	0/1:2,0:2:0:0,0,0	0/0:4,2:5:4.78:0,5,38	0/1:6,1:6:13.94:14,0,46	0/1:9,2:9:15.09:15,0,168	0/0:1,0:1:0:0,0,0	0/1:5,3:7:49.25:69,0,49	1/1:0,2:2:2.74:12,3,0	./.	0/0:2,0:2:3.01:0,3,37	0/1:4,0:4:12.44:12,0,28	0/0:3,0:3:2.55:0,3,24	./.	0/1:1,0:1:0:0,0,0	0/0:1,0:1:2.90:0,3,16	0/1:5,3:7:99:100,0,130	./.	./.	1/1:3,3:6:4.95:55,5,0	0/1:1,2:3:0:0,0,0	0/1:5,0:5:0:0,0,0	0/1:3,2:3:0:0,0,0	0/1:5,4:7:50.05:50,0,79	0/0:3,2:5:2.95:0,3,22	0/0:4,0:2:1.48:0,1,21
chr10	35437579	.	TC	T	2348.71	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.096;DP=732;FS=0.468;HRun=3;HaplotypeScore=73.0411;InbreedingCoeff=0.9942;MQ=82.37;MQ0=0;MQRankSum=-0.947;QD=31.74;ReadPosRankSum=2.865;VQSLOD=3.7966;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:60,0:59:99:0,175,2463	0/0:5,0:5:15.05:0,15,212	0/0:21,0:21:63.20:0,63,884	0/0:20,0:20:54.18:0,54,770	0/0:27,0:27:81.26:0,81,1147	0/0:16,0:16:48.16:0,48,691	0/0:27,0:27:78.26:0,78,1123	0/0:32,0:32:93.28:0,93,1290	0/0:27,0:27:75.24:0,75,1049	0/0:32,0:32:96.32:0,96,1367	0/0:13,0:13:39.13:0,39,562	1/1:2,27:29:78.24:967,78,0	0/0:30,0:30:84.23:0,84,1136	0/0:26,0:26:72.24:0,72,1033	0/0:20,0:20:60.20:0,60,864	0/0:21,0:21:60.19:0,60,846	0/0:41,0:41:99:0,123,1753	0/0:23,0:23:60.20:0,60,864	0/0:19,0:19:54.15:0,54,755	0/0:18,0:18:54.18:0,54,778	0/0:32,0:32:93.29:0,93,1302	0/0:33,0:33:99:0,99,1373	1/1:0,23:23:60.19:744,60,0	1/1:0,22:22:63.20:781,63,0	0/0:24,0:24:72.24:0,72,1035	0/0:41,0:41:99:0,117,1685	0/0:40,0:40:99:0,120,1720	0/0:10,0:10:30.10:0,30,432
chr10	35438370	.	TC	T	4671.26	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=3.948;DP=680;FS=12.601;HRun=1;HaplotypeScore=94.2642;InbreedingCoeff=0.9951;MQ=75.74;MQ0=2;MQRankSum=-3.011;QD=39.59;ReadPosRankSum=5.342;VQSLOD=4.0236;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:66.22:0,66,1051	0/0:5,0:5:15.05:0,15,240	0/0:24,0:21:62.85:0,63,892	0/0:24,0:19:41.84:0,42,568	1/1:0,29:29:87.20:1170,87,0	0/0:22,0:22:57.19:0,57,905	0/0:17,0:17:45.15:0,45,719	0/0:23,0:23:69.24:0,69,1104	1/1:0,34:34:90.30:1258,90,0	0/0:28,0:28:81.23:0,81,1248	0/0:10,0:10:30.09:0,30,456	0/0:31,0:31:90.31:0,90,1436	0/0:22,0:22:60.20:0,60,955	0/0:24,0:24:57.19:0,57,911	0/0:39,0:38:87.25:0,87,1321	1/1:0,25:25:72.24:1007,72,0	1/1:0,30:30:90.27:1237,90,0	0/0:19,0:19:51.17:0,51,807	0/0:11,0:11:33.11:0,33,518	0/0:24,0:24:72.25:0,72,1151	0/0:37,0:37:99:0,108,1722	0/0:26,0:25:63.15:0,63,978	0/0:21,0:21:57.18:0,57,887	0/0:34,0:33:84.27:0,84,1307	0/0:21,0:21:51.16:0,51,792	0/0:29,0:29:84.29:0,84,1343	0/0:27,0:27:69.20:0,69,1052	0/0:12,0:12:27.55:0,28,396
chr10	35438392	.	G	GCA	7921.09	PASS	AB=0.673;AC=25;AF=0.463;AN=54;BaseQRankSum=-14.501;DP=766;FS=1.712;HRun=0;HaplotypeScore=120.0121;InbreedingCoeff=-0.2240;MQ=63.18;MQ0=9;MQRankSum=-0.076;QD=14.35;ReadPosRankSum=-2.898;VQSLOD=4.4539;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:20,27:49:49.18:680,0,49	0/1:2,4:7:19.14:170,0,19	./.	0/1:43,0:16:5.07:5,0,71	0/0:26,0:27:43.80:0,44,617	0/1:11,16:28:50.73:466,0,51	0/1:11,13:24:66.05:379,0,66	0/1:15,10:26:35.24:334,0,35	0/1:31,0:33:4.31:4,0,486	0/1:10,12:24:28.04:437,0,28	0/1:2,9:11:20.52:169,0,21	0/0:8,0:31:55.22:0,55,268	1/1:11,12:25:33.11:508,33,0	0/1:8,12:20:10.11:295,0,10	1/1:13,24:36:10.96:612,11,0	0/0:27,0:29:65.51:0,66,678	0/0:36,0:36:75.17:0,75,830	0/1:8,12:20:37.36:439,0,37	1/1:12,5:17:5.56:234,6,0	0/1:9,11:21:38.18:321,0,38	0/1:26,16:43:70.53:736,0,71	1/1:14,14:28:30.08:462,30,0	0/0:7,0:18:13.15:0,13,88	0/0:9,0:34:53.04:0,53,253	0/1:8,21:31:3.42:536,0,3	0/1:14,10:25:26.98:416,0,27	0/1:11,18:31:76.85:635,0,77	0/1:2,5:8:24.69:83,0,25
chr10	35438860	.	AG	A	1751.90	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=9.121;DP=492;FS=0.995;HRun=8;HaplotypeScore=48.7566;InbreedingCoeff=0.9781;MQ=79.38;MQ0=0;MQRankSum=-1.176;QD=23.36;ReadPosRankSum=2.254;VQSLOD=4.1527;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:63.19:0,63,761	0/0:9,0:9:21.05:0,21,241	0/0:17,0:16:12.06:0,12,353	0/0:16,0:16:34.87:0,35,374	1/1:2,19:21:51.08:492,51,0	0/0:19,0:19:54.17:0,54,652	0/0:23,0:23:60.15:0,60,690	0/0:25,0:25:67.73:0,68,771	1/1:1,11:12:30.05:290,30,0	0/0:14,0:14:36.10:0,36,426	0/0:18,1:19:16.16:0,16,476	0/0:14,0:14:39.08:0,39,447	0/0:13,0:13:33.10:0,33,399	0/0:18,0:18:51.16:0,51,615	0/0:19,0:19:51.16:0,51,616	1/1:1,13:14:39.06:377,39,0	1/1:0,28:28:78.13:753,78,0	0/0:22,1:23:34.17:0,34,678	0/0:18,0:18:48.15:0,48,580	0/0:19,0:19:45.14:0,45,543	0/0:16,0:16:48.12:0,48,552	0/0:16,0:16:39.12:0,39,469	0/0:6,0:6:12.04:0,12,145	0/0:15,0:15:45.14:0,45,544	0/0:15,0:15:45.14:0,45,544	0/0:22,1:23:34.22:0,34,685	0/0:22,0:22:59.93:0,60,682	0/0:12,0:12:36.11:0,36,435
chr10	35439186	.	ATGTG	A	9256.33	PASS	AB=0.760;AC=39;AF=0.696;AN=56;BaseQRankSum=1.378;DP=609;FS=5.212;HRun=0;HaplotypeScore=110.3232;InbreedingCoeff=0.7057;MQ=55.81;MQ0=23;MQRankSum=0.267;QD=20.17;ReadPosRankSum=1.519;VQSLOD=4.5040;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:12,26:38:29.38:656,29,0	1/1:1,4:5:9.03:148,9,0	0/1:40,0:15:2.97:3,0,123	0/0:35,0:10:3.01:0,3,74	0/0:6,0:16:24.69:0,25,111	1/1:4,12:16:30.10:485,30,0	1/1:7,10:17:15.05:247,15,0	1/1:5,10:14:30.10:472,30,0	0/0:8,1:21:21.95:0,22,99	0/1:15,9:22:11.13:462,0,11	1/1:2,12:14:18.05:297,18,0	0/0:26,0:26:60.20:0,60,1406	1/1:3,16:19:42.14:683,42,0	1/1:8,13:21:36.12:576,36,0	1/1:5,12:17:29.22:493,29,0	0/0:2,0:9:12.23:0,12,58	0/1:5,2:26:71.01:71,0,71	1/1:4,20:25:42.08:612,42,0	1/1:11,8:14:15.79:264,16,0	1/1:4,17:21:39.13:643,39,0	1/1:19,30:47:39.13:643,39,0	1/1:6,16:22:33.58:545,34,0	0/0:6,0:7:20.81:0,21,417	0/0:34,0:33:86.81:0,87,1832	1/1:3,15:18:27.56:446,28,0	1/1:7,21:28:69.20:1065,69,0	1/1:4,13:17:24.08:396,24,0	1/1:4,2:6:3.01:49,3,0
chr10	35440753	.	A	AC	3720.69	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=14.353;DP=705;FS=3.208;HRun=1;HaplotypeScore=87.8332;InbreedingCoeff=0.9853;MQ=68.09;MQ0=0;MQRankSum=-1.837;QD=39.17;ReadPosRankSum=2.978;VQSLOD=4.3293;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:96.28:0,96,1290	0/0:6,0:6:18.06:0,18,252	0/0:32,0:31:93.17:0,93,1253	0/0:23,0:23:69.17:0,69,901	1/1:1,13:14:27.09:387,27,0	0/0:8,0:8:18.05:0,18,232	0/0:37,0:38:99:0,111,1531	0/0:5,0:5:15.04:0,15,196	1/1:0,27:27:75.21:1071,75,0	0/0:13,0:13:39.13:0,39,545	0/0:7,0:7:21.07:0,21,293	0/0:41,0:41:99:0,123,1720	0/0:37,0:37:99:0,108,1507	0/0:31,0:31:93.31:0,93,1300	0/0:42,0:42:99:0,126,1746	1/1:0,20:20:60.20:886,60,0	1/1:1,33:34:93.31:1376,93,0	0/0:38,0:38:99:0,111,1524	0/0:23,0:23:69.21:0,69,930	0/0:18,0:18:54.18:0,54,746	0/0:52,0:52:99:0,156,2148	0/0:11,0:11:33.11:0,33,462	0/0:7,0:7:15.05:0,15,210	0/0:42,0:42:99:0,123,1633	0/0:19,0:19:57.17:0,57,766	0/0:29,0:29:81.26:0,81,1116	0/0:39,0:38:99:0,114,1523	0/0:15,0:15:39.13:0,39,545
chr10	35441297	.	C	CA	3601.50	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-7.034;DP=713;FS=5.648;HRun=6;HaplotypeScore=65.7177;InbreedingCoeff=0.9748;MQ=74.61;MQ0=0;MQRankSum=-4.444;QD=31.59;ReadPosRankSum=1.350;VQSLOD=4.3019;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,102,1009	0/0:8,0:8:21.05:0,21,214	0/0:18,0:17:33.10:0,33,408	0/0:19,0:18:6.99:0,7,317	1/1:2,34:36:99:1225,99,0	0/0:29,0:29:78.17:0,78,791	0/0:23,0:23:63.14:0,63,643	0/0:20,0:20:51.11:0,51,516	1/1:2,18:20:48.15:604,48,0	0/0:32,0:32:87.19:0,87,887	0/0:23,0:23:69.16:0,69,704	0/0:37,0:37:99:0,105,1055	0/0:27,0:27:78.14:0,78,781	0/0:26,0:26:72.16:0,72,734	0/0:25,0:25:72.15:0,72,728	1/1:3,15:18:42.13:528,42,0	1/1:1,39:40:99:1244,99,0	0/0:28,0:28:69.11:0,69,694	0/0:17,0:17:39:0,39,384	0/0:23,0:23:69.15:0,69,702	0/0:23,0:23:66.13:0,66,665	0/0:34,0:34:96.18:0,96,964	0/0:36,0:36:96.19:0,96,966	0/0:21,0:21:51.05:0,51,497	0/0:33,0:33:93.19:0,93,936	0/0:29,0:29:81.18:0,81,822	0/0:20,0:20:57.11:0,57,574	0/0:10,0:10:30.07:0,30,306
chr10	35443065	.	GGCTCTTAAGATCGGTAT	G	5747.25	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=10.656;DP=667;FS=2.808;HRun=0;HaplotypeScore=295.0992;InbreedingCoeff=0.9958;MQ=89.74;MQ0=0;MQRankSum=-9.175;QD=78.73;ReadPosRankSum=2.947;VQSLOD=4.3428;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,129,9502	0/0:9,0:9:27.09:0,27,2079	0/0:23,0:23:57.19:0,57,3412	0/0:30,0:30:53.37:0,53,4170	1/1:1,16:17:33.11:1512,33,0	0/0:29,0:29:75.26:0,75,5865	0/0:31,0:31:87.30:0,87,6417	0/0:29,0:29:69.24:0,69,5088	1/1:4,10:14:18.06:876,18,0	0/0:20,0:20:57.20:0,57,4453	0/0:20,0:20:57.20:0,57,4634	0/0:23,0:23:66.23:0,66,5202	0/0:23,0:23:69.24:0,69,5508	0/0:24,0:24:72.25:0,72,5353	0/0:29,0:29:81.28:0,81,6250	1/1:2,17:19:48.16:2336,48,0	1/1:10,13:23:21.54:1023,22,0	0/0:30,0:30:87.30:0,87,6699	0/0:26,0:26:72.21:0,72,5024	0/0:13,0:13:39.13:0,39,2770	0/0:41,0:41:99:0,123,9461	0/0:27,0:27:81.28:0,81,6138	0/0:9,0:9:24.08:0,24,1704	0/0:29,0:29:81.28:0,81,5876	0/0:22,0:22:63.22:0,63,4742	0/0:29,0:29:84.28:0,84,6278	0/0:20,0:20:60.18:0,60,4019	0/0:13,0:13:39.13:0,39,3225
chr10	35444399	.	T	TGAGA	7395.19	PASS	AB=0.965;AC=34;AF=0.630;AN=54;BaseQRankSum=-8.949;DP=691;FS=23.453;HRun=0;HaplotypeScore=142.9641;InbreedingCoeff=0.1273;MQ=72.59;MQ0=29;MQRankSum=1.397;QD=13.35;ReadPosRankSum=5.642;VQSLOD=2.3271;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,25:39:20.01:268,20,0	0/1:17,0:19:22.08:303,0,22	0/0:38,0:18:8.05:0,8,106	0/1:51,0:26:15.82:16,0,79	0/0:30,0:30:0.89:0,1,2	1/1:20,0:20:9.87:433,10,0	1/1:22,0:23:29.44:355,29,0	1/1:39,0:37:63.22:654,63,0	0/0:20,0:20:7.25:0,7,57	1/1:17,0:18:21.28:287,21,0	0/1:21,0:21:1.96:315,0,2	1/1:10,0:12:22.22:184,22,0	0/1:20,0:22:67.09:272,0,67	0/1:20,0:20:40.10:374,0,40	0/1:23,0:23:30:451,0,30	./.	0/0:22,0:22:3.47:0,3,29	1/1:14,0:13:12.77:325,13,0	0/1:16,0:16:2.03:195,0,2	1/1:24,0:23:24.08:365,24,0	1/1:37,0:38:27.87:647,28,0	1/1:33,0:33:13.05:477,13,0	1/1:14,0:15:14.50:121,15,0	0/1:19,0:20:18.34:58,0,18	1/1:20,0:22:13.07:432,13,0	0/1:28,0:28:19.84:555,0,20	0/1:29,0:29:38.99:309,0,39	0/0:6,0:5:11.52:0,12,69
chr10	35444406	.	GAGAGAGAGAGAGAGACAGAGACAGAGACAGAGAC	G	1404.63	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=4.006;DP=737;FS=0.000;HRun=0;HaplotypeScore=452.9480;InbreedingCoeff=0.8314;MQ=67.01;MQ0=30;MQRankSum=-3.183;QD=12.32;ReadPosRankSum=0.851;VQSLOD=0.8065;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:54.17:0,54,5598	0/0:17,0:17:45.14:0,45,3031	0/0:35,0:15:29.92:0,30,402	0/0:47,0:22:36.97:0,37,439	1/1:4,31:35:3.01:190,3,0	0/0:26,0:25:49.40:0,49,3323	0/0:27,0:26:37.91:0,38,1464	0/0:41,0:38:99:0,108,2662	1/1:1,24:25:12.04:878,12,0	0/0:19,0:19:46.93:0,47,2177	0/0:20,0:20:33.10:0,33,1874	0/0:13,0:12:29.30:0,29,1088	0/0:20,0:20:54.15:0,54,5199	0/0:19,0:19:39.12:0,39,2767	0/0:28,0:27:54.14:0,54,3601	1/1:0,27:27:3.01:196,3,0	1/1:2,25:27:4.83:270,5,0	0/0:16,0:15:30.05:0,30,1551	0/0:16,0:15:38.60:0,39,2613	0/0:26,0:25:36.10:0,36,1004	0/0:43,0:41:77.62:0,78,4129	0/0:34,0:34:45.14:0,45,2039	0/0:15,0:16:21:0,21,277	0/0:20,0:20:33.01:0,33,958	0/0:24,0:24:52.98:0,53,3663	0/0:28,0:28:84.21:0,84,4507	0/0:33,0:32:57.65:0,58,3895	0/0:9,0:8:12.04:0,12,1548
chr10	35444420	.	GAC	G	10227.40	PASS	AB=0.757;AC=46;AF=0.821;AN=56;BaseQRankSum=-0.739;DP=691;FS=8.024;HRun=0;HaplotypeScore=110.4207;InbreedingCoeff=0.5512;MQ=58.87;MQ0=33;MQRankSum=1.241;QD=17.97;ReadPosRankSum=2.187;VQSLOD=4.3826;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:15.92:0,16,381	1/1:2,14:16:41.61:573,42,0	0/0:23,0:6:8.07:0,8,106	0/1:35,0:12:10.79:11,0,81	0/0:31,0:31:0.89:0,1,2	1/1:16,10:25:53.80:630,54,0	1/1:7,19:25:29.44:356,29,0	1/1:21,16:33:46.11:554,46,0	1/1:24,0:24:3.67:25,4,0	1/1:2,12:14:37.02:411,37,0	1/1:2,16:18:30.10:452,30,0	1/1:13,3:15:34.16:279,34,0	1/1:3,17:20:50.59:663,51,0	0/1:1,18:19:11.63:465,0,12	1/1:3,25:27:47.84:634,48,0	0/0:27,0:27:2.80:0,3,13	1/1:28,0:28:2.84:14,3,0	1/1:2,14:15:26.25:341,26,0	1/1:5,13:15:38.75:432,39,0	1/1:3,17:19:24.08:365,24,0	1/1:6,34:37:59.39:790,59,0	1/1:3,33:36:39.13:594,39,0	1/1:17,2:19:29.93:243,30,0	1/1:16,3:19:7.24:181,7,0	1/1:9,13:22:56.39:678,56,0	1/1:5,27:32:29.29:823,29,0	1/1:2,26:27:41.76:554,42,0	1/1:2,9:10:12.01:158,12,0
chr10	35444649	.	TC	T	2028.41	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=10.557;DP=591;FS=0.460;HRun=7;HaplotypeScore=59.2152;InbreedingCoeff=0.9694;MQ=85.72;MQ0=0;MQRankSum=-3.254;QD=24.15;ReadPosRankSum=3.625;VQSLOD=4.0321;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,138,1708	0/0:8,0:8:24.08:0,24,302	0/0:23,0:23:57.09:0,57,664	0/0:20,0:20:43.58:0,44,537	1/1:4,24:28:65.19:659,65,0	0/0:26,0:26:66.21:0,66,830	0/0:20,0:20:54.17:0,54,679	0/0:32,0:32:90.27:0,90,1108	1/1:1,18:19:48.11:489,48,0	0/0:16,0:16:45.14:0,45,553	0/0:22,0:22:63.20:0,63,790	0/0:16,1:17:20.54:0,21,562	0/0:16,0:16:48.14:0,48,589	0/0:15,0:15:45.14:0,45,555	0/0:20,0:20:60.19:0,60,754	1/1:1,16:17:48.11:490,48,0	1/1:0,20:20:54.12:551,54,0	0/0:21,0:21:57.14:0,57,698	0/0:19,0:19:45.12:0,45,543	0/0:22,0:22:66.21:0,66,827	0/0:23,0:23:63.20:0,63,793	0/0:22,0:22:60.19:0,60,751	0/0:10,0:10:30.10:0,30,377	0/0:26,0:26:60.19:0,60,754	0/0:20,0:20:51.16:0,51,640	0/0:26,0:26:66.21:0,66,831	0/0:28,0:28:78.25:0,78,980	0/0:4,0:4:6.01:0,6,62
chr10	35445725	.	GA	G	2402.17	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.270;DP=620;FS=3.968;HRun=1;HaplotypeScore=59.8906;InbreedingCoeff=0.9785;MQ=85.90;MQ0=0;MQRankSum=-0.924;QD=34.32;ReadPosRankSum=1.653;VQSLOD=3.6043;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,117,1761	0/0:9,0:9:27.09:0,27,410	0/0:23,0:23:66.20:0,66,998	0/0:17,0:17:51.17:0,51,797	0/0:20,0:20:57.18:0,57,869	0/0:32,0:32:96.31:0,96,1479	0/0:19,0:19:57.19:0,57,892	0/0:21,0:21:63.20:0,63,962	0/0:26,0:26:78.27:0,78,1216	0/0:25,0:25:72.24:0,72,1093	0/0:8,0:8:24.08:0,24,375	1/1:0,29:29:81.27:1128,81,0	0/0:18,0:18:54.17:0,54,820	0/0:19,0:19:57.17:0,57,845	0/0:23,0:23:66.20:0,66,1008	0/0:13,0:13:39.13:0,39,608	0/0:33,0:32:99:0,99,1499	0/0:32,0:31:93.29:0,93,1398	0/0:21,0:21:60.19:0,60,916	0/0:13,0:13:39.13:0,39,608	0/0:40,0:40:99:0,120,1827	0/0:21,0:21:57.11:0,57,838	1/1:0,17:17:42.14:580,42,0	1/1:0,24:24:60.20:837,60,0	0/0:19,0:19:54.16:0,54,820	0/0:32,0:32:93.26:0,93,1389	0/0:23,0:23:69.23:0,69,1079	0/0:4,0:4:9.03:0,9,141
chr10	35446695	.	T	TG	24439.78	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=2.257;DP=716;FS=5.801;HRun=3;HaplotypeScore=111.4280;InbreedingCoeff=0.9978;MQ=88.61;MQ0=0;MQRankSum=-12.267;QD=37.43;ReadPosRankSum=6.672;VQSLOD=3.6979;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,30:34:71.27:1160,71,0	1/1:0,14:14:42.14:587,42,0	0/0:34,0:34:90.27:0,90,1067	0/0:29,0:29:75.22:0,75,884	1/1:0,24:24:69.23:966,69,0	1/1:1,16:17:48.16:671,48,0	1/1:2,35:37:99:1378,99,0	1/1:2,33:35:99:1334,99,0	1/1:3,23:26:69.23:966,69,0	1/1:1,24:25:72.23:992,72,0	1/1:0,15:15:36.12:504,36,0	1/1:1,30:31:84.28:1176,84,0	1/1:4,24:28:69.23:966,69,0	1/1:0,24:24:66.22:924,66,0	1/1:0,28:28:78.26:1092,78,0	1/1:1,21:22:60.20:840,60,0	1/1:3,40:43:99:1639,117,0	1/1:2,23:25:69.23:966,69,0	1/1:2,15:17:45.11:593,45,0	1/1:0,20:20:45.15:629,45,0	1/1:0,44:44:99:1723,123,0	1/1:3,16:19:45.15:630,45,0	1/1:0,18:18:51.17:714,51,0	1/1:0,29:29:75.25:1050,75,0	1/1:1,26:27:78.26:1092,78,0	1/1:4,18:22:54.18:756,54,0	1/1:0,20:20:57.19:798,57,0	1/1:0,9:9:21.07:294,21,0
chr10	35447144	.	GGGCT	G	10686.99	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=4.453;DP=337;FS=23.087;HRun=0;HaplotypeScore=70.9727;InbreedingCoeff=0.8164;MQ=61.74;MQ0=32;MQRankSum=-7.370;QD=36.47;ReadPosRankSum=5.153;VQSLOD=3.0644;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,16:17:27.09:523,27,0	1/1:0,5:5:15.05:291,15,0	0/0:24,0:19:51.17:0,51,1299	0/0:20,0:15:36.11:0,36,899	1/1:1,13:13:18.06:348,18,0	1/1:3,5:6:15.05:291,15,0	1/1:3,4:7:15.05:290,15,0	1/1:4,11:12:33.11:639,33,0	1/1:2,5:5:15.05:291,15,0	1/1:5,9:12:24.08:465,24,0	1/1:4,10:11:15.05:290,15,0	1/1:2,10:10:21.07:407,21,0	1/1:0,4:4:12.04:232,12,0	1/1:1,12:13:30.10:581,30,0	1/1:1,13:14:36.12:697,36,0	1/1:1,10:10:30.10:581,30,0	1/1:4,10:13:27.09:523,27,0	1/1:4,3:5:9.03:174,9,0	1/1:0,8:8:21.07:407,21,0	1/1:2,10:12:24.08:465,24,0	1/1:3,8:10:18.06:349,18,0	1/1:2,8:10:21.07:407,21,0	1/1:0,8:8:18.06:349,18,0	1/1:4,7:9:3.93:59,4,0	1/1:2,14:14:30.10:581,30,0	1/1:5,11:14:33.11:633,33,0	1/1:5,14:17:33.11:639,33,0	1/1:0,3:3:9.03:174,9,0
chr10	35447583	.	C	CCA	14731.96	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-4.819;DP=426;FS=3.195;HRun=0;HaplotypeScore=85.4077;InbreedingCoeff=0.8501;MQ=68.47;MQ0=4;MQRankSum=-2.624;QD=38.77;ReadPosRankSum=4.395;VQSLOD=7.1934;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,13:15:36.12:639,36,0	1/1:0,2:2:3.01:55,3,0	0/0:20,0:11:22.60:0,23,293	0/0:26,0:15:25.35:0,25,270	1/1:1,7:8:12.04:214,12,0	1/1:0,14:14:36.12:656,36,0	1/1:2,19:21:37.38:824,37,0	1/1:4,18:18:44.89:554,45,0	1/1:1,9:11:27.09:486,27,0	1/1:2,8:10:18.04:298,18,0	1/1:1,5:6:18.06:324,18,0	1/1:1,19:20:57.20:1027,57,0	1/1:0,12:12:26.78:489,27,0	1/1:2,21:23:56.91:1007,57,0	1/1:2,9:11:18.06:322,18,0	1/1:0,17:16:39.13:711,39,0	1/1:3,27:30:72.24:1315,72,0	1/1:0,16:15:36.10:624,36,0	1/1:4,11:14:26.15:599,26,0	1/1:0,6:6:15.05:274,15,0	1/1:3,35:37:65.25:1169,65,0	1/1:0,7:7:18.06:328,18,0	1/1:1,10:12:24.03:432,24,0	1/1:1,14:15:33.11:602,33,0	1/1:2,4:6:17.99:281,18,0	1/1:0,18:18:51.16:902,51,0	1/1:0,9:9:24.08:436,24,0	1/1:1,6:6:9.03:164,9,0
chr10	35448604	.	TC	T	14348.32	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=7.258;DP=705;FS=1.003;HRun=6;HaplotypeScore=73.1038;InbreedingCoeff=0.9974;MQ=88.11;MQ0=0;MQRankSum=-5.710;QD=28.36;ReadPosRankSum=3.294;VQSLOD=5.5108;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,44:47:99:1322,123,0	1/1:1,4:5:15.04:161,15,0	0/0:26,0:26:66.21:0,66,844	0/0:24,0:24:60.18:0,60,769	0/0:24,0:24:69.22:0,69,907	1/1:2,22:24:66.16:709,66,0	1/1:4,22:26:66.16:709,66,0	1/1:4,28:32:84.18:887,84,0	0/0:12,0:12:33.11:0,33,434	1/1:1,25:26:75.16:791,75,0	1/1:1,14:15:39.10:419,39,0	0/0:21,0:21:63.20:0,63,828	1/1:3,35:38:99:1128,105,0	1/1:0,16:16:48.12:516,48,0	1/1:1,31:32:78.20:838,78,0	0/0:22,0:22:66.19:0,66,841	0/0:28,0:28:81.26:0,81,1064	1/1:1,27:28:69.17:742,69,0	1/1:4,24:28:72.18:774,72,0	1/1:1,13:14:33.08:354,33,0	1/1:3,56:59:99:1548,144,0	1/1:0,22:22:60.15:645,60,0	0/0:17,0:17:48.16:0,48,631	0/0:25,0:25:75.24:0,75,985	1/1:2,25:27:75.19:806,75,0	1/1:0,22:22:66.17:709,66,0	1/1:0,27:27:69.17:742,69,0	1/1:1,17:18:51.13:548,51,0
chr10	35449516	.	GAGGGAATCC	G	2274.48	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=7.799;DP=630;FS=4.880;HRun=0;HaplotypeScore=181.1923;InbreedingCoeff=0.9960;MQ=82.68;MQ0=0;MQRankSum=-8.685;QD=45.49;ReadPosRankSum=1.657;VQSLOD=3.4383;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,138,6316	0/0:12,0:12:33.11:0,33,1495	0/0:20,0:20:54.19:0,54,2327	0/0:18,0:18:51.18:0,51,2074	0/0:16,0:16:45.15:0,45,2010	0/0:18,0:18:51.18:0,51,2246	0/0:26,0:26:66.23:0,66,3076	0/0:29,0:29:66.23:0,66,3119	0/0:25,0:25:66.23:0,66,3015	0/0:17,0:17:45.15:0,45,2109	0/0:17,0:17:51.18:0,51,2275	1/1:1,18:19:39.13:1171,39,0	0/0:31,0:31:81.28:0,81,3615	0/0:24,0:24:66.23:0,66,3019	0/0:25,0:25:72.25:0,72,3262	0/0:12,0:12:36.12:0,36,1577	0/0:35,0:35:99:0,105,4467	0/0:21,0:21:54.19:0,54,2538	0/0:25,0:25:72.25:0,72,3263	0/0:18,0:18:45.15:0,45,2105	0/0:48,0:48:99:0,141,6404	0/0:21,0:21:51.18:0,51,2277	1/1:2,8:10:18.06:532,18,0	1/1:5,16:21:23.98:713,24,0	0/0:21,0:21:63.22:0,63,2979	0/0:21,0:21:60.20:0,60,2758	0/0:23,0:23:69.24:0,69,3216	0/0:10,0:10:30.10:0,30,1415
chr10	35450205	.	G	GTT	12409.47	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-12.677;DP=536;FS=3.406;HRun=7;HaplotypeScore=65.2381;InbreedingCoeff=0.9831;MQ=76.31;MQ0=6;MQRankSum=-1.826;QD=36.82;ReadPosRankSum=-0.128;VQSLOD=4.6094;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,29:33:78.27:1280,78,0	1/1:0,6:6:15.05:246,15,0	0/0:38,0:22:13.43:0,13,183	0/0:21,0:15:25:0,25,182	0/0:25,0:25:72.17:0,72,814	1/1:2,16:18:42.14:689,42,0	1/1:4,23:29:69.23:1107,69,0	1/1:5,17:23:51.14:779,51,0	0/0:13,0:13:36.08:0,36,408	1/1:4,14:18:39.13:630,39,0	1/1:1,10:11:27.09:443,27,0	0/0:22,0:22:66.20:0,66,769	1/1:3,5:8:12.04:195,12,0	1/1:2,9:11:24.08:394,24,0	1/1:3,20:23:54.18:886,54,0	0/0:24,0:24:54.14:0,54,619	0/0:24,0:24:63.17:0,63,734	1/1:3,17:23:50.66:779,51,0	1/1:7,15:21:39.60:621,40,0	1/1:3,17:21:54.06:789,54,0	1/1:0,9:9:24.08:394,24,0	1/1:4,5:9:12.04:197,12,0	0/0:14,0:14:30.08:0,30,349	0/0:17,0:17:42.10:0,42,478	1/1:2,22:25:57.19:935,57,0	1/1:1,19:20:57.17:903,57,0	1/1:0,14:15:42.10:650,42,0	1/1:2,10:13:30.10:492,30,0
chr10	35450891	.	CATA	C	877.26	PASS	AB=0.910;AC=9;AF=0.161;AN=56;BaseQRankSum=2.019;DP=723;FS=17.253;HRun=0;HaplotypeScore=184.5572;InbreedingCoeff=-0.1859;MQ=62.13;MQ0=18;MQRankSum=-5.332;QD=3.52;ReadPosRankSum=-3.707;VQSLOD=0.4785;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:33:28.44:28,0,466	0/1:5,1:6:40.34:40,0,280	0/0:58,0:30:86.95:0,87,1741	0/0:56,0:40:88.85:0,89,2180	0/0:24,0:24:72.23:0,72,1661	0/0:11,0:11:9.03:0,9,156	0/1:27,12:38:99:258,0,1361	0/1:31,6:34:99:355,0,1530	0/0:25,0:24:66.23:0,66,1615	0/1:24,0:24:1.85:2,0,857	0/0:8,0:7:9.03:0,9,206	0/1:34,0:34:5.72:6,0,691	0/0:17,0:17:21.07:0,21,396	0/0:24,0:24:26.45:0,26,578	0/0:23,0:23:20.59:0,21,464	0/0:28,0:28:84.29:0,84,2017	0/0:40,0:40:99:0,114,2769	0/0:20,0:21:25.79:0,26,490	0/1:25,8:30:99:275,0,1209	0/0:8,0:8:18.06:0,18,396	0/0:48,0:44:17.98:0,18,288	0/0:18,0:17:20.84:0,21,380	0/1:13,1:14:28.86:29,0,388	0/1:28,1:28:16.35:16,0,263	0/0:17,1:18:12.04:0,12,251	0/0:24,0:24:63.07:0,63,1168	0/0:15,0:15:29.97:0,30,542	0/0:7,0:7:11.51:0,12,138
chr10	35450894	.	A	ACACACACACCACAC	22356.97	PASS	AB=0.574;AC=42;AF=0.750;AN=56;BaseQRankSum=-1.140;DP=889;FS=7.537;HRun=0;HaplotypeScore=249.6108;InbreedingCoeff=0.6174;MQ=57.77;MQ0=19;MQRankSum=-9.112;QD=34.55;ReadPosRankSum=-1.986;VQSLOD=2.9641;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:13,34:52:17.72:801,0,18	1/1:5,0:6:12:228,12,0	0/0:60,0:28:41.98:0,42,865	0/0:60,0:38:0.50:0,1,1043	0/0:23,0:23:54.18:0,54,1816	1/1:1,11:16:9.03:613,9,0	1/1:39,0:38:80.24:2429,80,0	1/1:37,0:35:75.23:2232,75,0	0/0:26,0:25:66.01:0,66,2371	1/1:4,21:30:56.60:2296,57,0	1/1:5,5:11:6.02:188,6,0	1/1:9,31:46:30.10:1938,30,0	1/1:4,18:26:9.50:614,10,0	1/1:9,19:32:13.22:1014,13,0	1/1:8,20:32:12.04:818,12,0	0/0:30,0:30:78.24:0,78,2668	0/0:42,0:42:99:0,105,3741	1/1:10,13:26:2.94:405,3,0	1/1:34,0:32:51.14:1687,51,0	1/1:4,10:16:6.02:269,6,0	1/1:21,28:59:13.94:679,14,0	1/1:3,15:25:9.01:526,9,0	1/1:7,7:17:8.97:359,9,0	0/1:11,24:40:59.80:707,0,60	1/1:7,16:25:6.02:245,6,0	1/1:8,25:42:71.12:3237,71,0	1/1:8,11:20:8.90:459,9,0	1/1:1,6:7:9.03:614,9,0
chr10	35450908	.	CA	C	1833.66	PASS	AB=0.945;AC=18;AF=0.321;AN=56;BaseQRankSum=10.369;DP=858;FS=3.203;HRun=1;HaplotypeScore=173.3695;InbreedingCoeff=-0.4680;MQ=55.23;MQ0=22;MQRankSum=-8.102;QD=3.75;ReadPosRankSum=1.828;VQSLOD=0.5408;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:48,0:48:14.05:14,0,231	0/1:7,1:8:61.74:62,0,159	0/0:80,0:33:87.15:0,87,1224	0/0:67,0:35:94.93:0,95,1256	0/0:27,0:27:69.23:0,69,1091	0/1:14,0:14:28.87:29,0,129	0/1:24,17:40:99:583,0,451	0/1:27,17:40:99:402,0,877	0/0:29,0:28:62.69:0,63,1183	0/1:26,0:26:78.01:78,0,355	0/1:10,0:9:32.83:33,0,87	0/1:44,0:44:72.13:72,0,419	0/1:23,0:23:23.82:24,0,196	0/1:26,0:26:34.93:35,0,110	0/1:26,0:26:3.40:3,0,222	0/0:28,0:28:84.29:0,84,1343	0/0:43,0:43:99:0,126,1962	0/0:21,0:21:30:0,30,410	0/1:17,9:23:99:319,0,442	0/1:17,0:17:65.66:66,0,155	0/0:50,1:47:31.61:0,32,456	0/1:28,0:27:59.75:60,0,317	0/1:13,0:13:42.34:42,0,127	0/1:35,2:36:93.71:94,0,114	0/1:19,0:19:13.48:13,0,130	0/1:39,0:39:63.54:64,0,799	0/0:15,0:15:5.11:0,5,288	0/0:8,0:8:17.87:0,18,198
chr10	35451196	.	A	AACACACACACAT	4828.73	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=1.360;DP=665;FS=6.786;HRun=0;HaplotypeScore=263.7752;InbreedingCoeff=0.9934;MQ=72.09;MQ0=2;MQRankSum=-8.517;QD=68.01;ReadPosRankSum=0.421;VQSLOD=3.5415;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:81.26:0,81,2671	0/0:8,0:8:21.07:0,21,688	0/0:28,0:20:45.14:0,45,1330	0/0:28,0:26:54.18:0,54,1537	0/0:22,0:22:57.11:0,57,1707	0/0:22,0:22:46.27:0,46,1196	0/0:24,0:24:57.15:0,57,1936	0/0:33,0:33:87.29:0,87,2721	0/0:22,0:22:45.07:0,45,1234	0/0:29,0:28:59.93:0,60,2016	0/0:14,0:14:32.98:0,33,954	1/1:17,12:29:51.17:2624,51,0	0/0:16,0:16:39.07:0,39,1211	0/0:18,0:18:48.12:0,48,1556	0/0:38,0:36:79.17:0,79,2289	0/0:30,0:30:75.26:0,75,2601	0/0:53,0:52:77.90:0,78,3484	0/0:17,0:17:33.16:0,33,1153	0/0:22,0:22:60.18:0,60,1791	0/0:14,0:14:36.08:0,36,1024	0/0:31,0:30:68.79:0,69,2154	0/0:24,0:22:47.78:0,48,1250	1/1:4,6:18:21.07:1155,21,0	1/1:17,7:22:20.30:1050,20,0	0/0:14,0:12:20.75:0,21,768	0/0:21,0:19:42.14:0,42,1411	0/0:17,0:16:41.96:0,42,1015	0/0:12,0:12:33.11:0,33,1102
chr10	35451201	.	ACAG	A	314.02	PASS	AB=0.875;AC=5;AF=0.089;AN=56;BaseQRankSum=8.466;DP=647;FS=1.577;HRun=0;HaplotypeScore=155.6075;InbreedingCoeff=0.6518;MQ=65.70;MQ0=3;MQRankSum=-8.095;QD=5.23;ReadPosRankSum=-1.870;VQSLOD=2.3812;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:81.26:0,81,1776	0/0:9,0:9:21.04:0,21,462	0/0:31,0:19:51.08:0,51,974	0/0:27,0:24:60.12:0,60,1219	0/0:21,0:21:57.64:0,58,1207	0/0:20,0:20:51.06:0,51,1090	0/0:24,0:24:57.14:0,57,1284	0/0:34,0:34:93.31:0,93,2012	0/0:20,0:20:54.17:0,54,1168	0/0:25,0:24:63.21:0,63,1394	0/0:14,0:14:33.10:0,33,695	0/1:24,4:28:99:168,0,175	0/0:16,0:16:39.08:0,39,853	0/0:19,0:19:23.16:0,23,1054	0/0:37,0:35:36.19:0,36,1719	0/0:30,0:30:78.27:0,78,1752	0/0:53,0:52:99:0,134,2818	0/0:15,0:15:41.70:0,42,920	0/0:22,0:22:45.89:0,46,1361	0/0:14,0:14:36.08:0,36,715	0/0:34,0:33:68.56:0,69,1586	0/0:24,0:22:48.04:0,48,1098	1/1:8,0:8:3.22:114,3,0	1/1:19,5:22:14.13:146,14,0	0/0:14,0:12:21.07:0,21,484	0/0:19,0:17:17.05:0,17,960	0/0:17,0:16:8.23:0,8,807	0/0:13,0:13:36.12:0,36,795
chr10	35451211	.	TGCTCTAA	T	336.34	PASS	AB=0.974;AC=11;AF=0.196;AN=56;BaseQRankSum=8.323;DP=596;FS=0.724;HRun=0;HaplotypeScore=182.1702;InbreedingCoeff=0.1219;MQ=60.86;MQ0=9;MQRankSum=-7.196;QD=1.96;ReadPosRankSum=-4.354;VQSLOD=1.4915;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:68.25:0,68,2327	0/0:7,0:7:19.60:0,20,572	0/0:34,0:16:48.16:0,48,1563	0/0:33,0:23:63.17:0,63,1858	0/0:22,0:22:56.69:0,57,1826	0/0:18,0:18:5.94:0,6,1238	0/0:22,0:22:53.93:0,54,1696	0/0:31,0:30:87.30:0,87,3247	0/0:19,0:19:54.18:0,54,1721	0/1:19,1:19:26.96:27,0,1794	0/0:12,0:12:30.93:0,31,824	0/1:22,4:26:99:129,0,283	0/0:14,0:14:37.19:0,37,1147	0/1:17,0:17:7.75:8,0,1405	0/1:32,0:30:33.36:33,0,2128	0/0:31,0:31:84.27:0,84,2787	0/0:47,0:46:99:0,118,3529	0/0:17,0:15:43.18:0,43,1391	0/1:21,0:20:23.16:23,0,1858	0/0:10,0:10:24.07:0,24,826	0/0:32,0:34:68.10:0,68,2330	0/0:21,0:19:45.69:0,46,1244	1/1:8,0:8:12.68:100,13,0	1/1:12,5:18:1.38:62,1,0	0/0:13,0:11:21.04:0,21,747	0/1:18,0:16:74.19:74,0,1278	0/1:12,0:11:28.15:28,0,972	0/0:10,0:10:30.10:0,30,992
chr10	35451218	.	AAC	A	1036.67	PASS	AB=1.000;AC=13;AF=0.250;AN=52;BaseQRankSum=0.196;DP=648;FS=4.791;HRun=0;HaplotypeScore=155.7065;InbreedingCoeff=0.6758;MQ=53.40;MQ0=14;MQRankSum=3.188;QD=6.40;ReadPosRankSum=1.738;VQSLOD=3.1567;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:33:14.98:0,15,127	0/1:10,0:10:0.38:0,0,1	./.	./.	1/1:14,7:22:14.49:143,14,0	0/0:19,0:18:5.95:0,6,56	0/0:23,0:23:12.01:0,12,121	0/0:34,0:33:18.68:0,19,143	1/1:10,9:20:23.58:243,24,0	0/0:20,0:19:18.27:0,18,119	0/0:13,0:13:0:0,0,0	1/1:22,7:29:20.85:217,21,0	0/0:17,0:17:5.96:0,6,62	0/0:19,0:22:2.38:0,2,12	0/0:39,0:37:7.63:0,8,33	0/0:17,0:28:29.79:0,30,280	1/1:25,22:48:54.11:535,54,0	0/0:19,0:17:8.92:0,9,78	0/0:24,0:23:18.38:0,18,147	0/0:11,0:11:3.01:0,3,37	0/0:41,0:39:16.71:0,17,134	0/0:24,0:22:5.80:0,6,57	1/1:6,2:8:5.91:38,6,0	1/1:20,3:20:2.72:19,3,0	0/0:15,0:13:3:0,3,26	0/0:18,0:16:17.80:0,18,120	0/0:14,0:13:8.67:0,9,67	0/0:11,0:13:11.90:0,12,86
chr10	35451263	.	TGGAGCCCA	T	1597.24	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=5.399;DP=531;FS=2.616;HRun=0;HaplotypeScore=173.7977;InbreedingCoeff=0.9240;MQ=71.79;MQ0=15;MQRankSum=-8.818;QD=38.96;ReadPosRankSum=-2.411;VQSLOD=2.9529;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:30:78.27:0,78,3330	0/0:3,0:3:9.03:0,9,339	0/0:27,0:19:48.16:0,48,2028	0/0:30,0:20:54.19:0,54,2150	0/0:18,0:17:42.14:0,42,1774	0/0:15,0:14:32.79:0,33,1434	0/0:26,0:25:75.26:0,75,3147	0/0:31,0:31:87.30:0,87,3619	0/0:23,0:23:55.71:0,56,2191	0/0:15,0:15:39.13:0,39,1620	0/0:7,0:7:18.06:0,18,780	1/1:2,24:26:59.25:1314,59,0	0/0:9,0:9:14.98:0,15,595	0/0:24,0:24:56.21:0,56,2352	0/0:29,0:27:70.86:0,71,2777	0/0:17,0:17:42.14:0,42,1687	0/0:43,0:42:99:0,102,4197	0/0:10,0:10:27.08:0,27,1173	0/0:17,0:16:48.16:0,48,2015	0/0:11,0:10:27.09:0,27,1163	0/0:40,0:38:78.42:0,78,3508	0/0:15,0:14:36:0,36,1556	1/1:2,3:5:6.02:114,6,0	1/1:2,8:10:15.02:303,15,0	0/0:16,0:15:29.73:0,30,1237	0/0:14,0:14:39.13:0,39,1546	0/0:9,0:9:21.07:0,21,778	0/0:10,0:10:27.09:0,27,1027
chr10	35451782	.	G	GTA	2485.60	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=10.727;DP=690;FS=6.122;HRun=0;HaplotypeScore=123.6908;InbreedingCoeff=0.9861;MQ=90.90;MQ0=0;MQRankSum=-3.404;QD=29.59;ReadPosRankSum=2.838;VQSLOD=5.5538;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,135,2042	0/0:11,0:11:33.09:0,33,467	0/0:29,0:29:81.24:0,81,1173	0/0:27,0:27:72.24:0,72,1082	0/0:14,0:14:42.13:0,42,621	0/0:16,0:16:45.15:0,45,684	0/0:28,0:28:84.29:0,84,1285	0/0:23,0:23:63.21:0,63,944	0/0:27,0:27:78.24:0,78,1169	0/0:29,0:29:81.27:0,81,1220	0/0:8,0:8:18.06:0,18,276	1/1:4,22:26:75.23:977,75,0	0/0:19,0:19:54.18:0,54,827	0/0:27,0:27:81.25:0,81,1215	0/0:23,0:23:69.21:0,69,1032	0/0:29,0:29:87.30:0,87,1331	0/0:30,0:30:90.31:0,90,1376	0/0:32,0:32:90.31:0,90,1375	0/0:29,0:29:87.28:0,87,1290	0/0:14,0:14:39.13:0,39,596	0/0:43,0:43:99:0,123,1875	0/0:16,0:16:45.12:0,45,646	1/1:5,11:16:15.41:395,15,0	1/1:9,33:42:57.27:1254,57,0	0/0:22,0:22:60.20:0,60,918	0/0:26,0:26:75.25:0,75,1148	0/0:30,0:29:90.31:0,90,1370	0/0:6,0:6:15.05:0,15,230
chr10	35451784	.	G	GTA	2763.45	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.529;DP=694;FS=7.808;HRun=0;HaplotypeScore=122.7787;InbreedingCoeff=0.9941;MQ=89.35;MQ0=0;MQRankSum=-2.887;QD=34.54;ReadPosRankSum=2.021;VQSLOD=6.0130;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,138,2174	0/0:11,0:11:33.10:0,33,513	0/0:28,0:28:81.17:0,81,1214	0/0:25,0:25:72.24:0,72,1145	0/0:14,0:14:42.13:0,42,662	0/0:16,0:16:45.14:0,45,706	0/0:29,0:29:84.27:0,84,1345	0/0:23,0:23:66.17:0,66,955	0/0:27,0:27:78.25:0,78,1244	0/0:28,0:28:81.27:0,81,1299	0/0:8,0:8:18.06:0,18,286	1/1:3,22:25:71.96:977,72,0	0/0:21,0:21:57.18:0,57,905	0/0:28,0:28:81.25:0,81,1253	0/0:24,0:24:72.23:0,72,1123	0/0:31,0:31:90.29:0,90,1441	0/0:31,0:31:90.30:0,90,1444	0/0:32,0:32:90.29:0,90,1441	0/0:29,0:29:87.27:0,87,1343	0/0:14,0:14:39.12:0,39,612	0/0:43,0:43:99:0,126,2013	0/0:16,0:16:45.13:0,45,680	1/1:4,11:15:42.06:492,42,0	1/1:7,33:40:98.56:1437,99,0	0/0:23,0:23:60.20:0,60,978	0/0:26,0:26:78.26:0,78,1248	0/0:31,0:30:93.31:0,93,1481	0/0:6,0:6:18.05:0,18,269
chr10	35451842	.	AG	A	12640.12	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-14.702;DP=617;FS=3.412;HRun=5;HaplotypeScore=84.4422;InbreedingCoeff=0.9920;MQ=79.82;MQ0=0;MQRankSum=-0.310;QD=29.88;ReadPosRankSum=2.272;VQSLOD=5.4628;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,46:47:99:1429,126,0	1/1:1,6:7:15.04:170,15,0	0/0:15,0:15:39.03:0,39,464	0/0:19,0:18:31.29:0,31,362	0/0:17,0:17:45.15:0,45,615	1/1:1,19:20:54.15:613,54,0	1/1:1,21:22:63.18:715,63,0	1/1:3,27:30:81.23:917,81,0	0/0:22,0:22:66.21:0,66,889	1/1:4,20:24:60.17:680,60,0	1/1:1,6:7:12.03:136,12,0	0/0:22,0:22:60.20:0,60,816	1/1:1,21:22:57.16:640,57,0	1/1:2,34:36:99:1123,99,0	1/1:1,15:16:45.13:511,45,0	0/0:28,0:28:78.26:0,78,1064	0/0:30,0:30:84.27:0,84,1121	1/1:1,25:26:69.20:783,69,0	1/1:1,19:20:57.12:616,57,0	1/1:1,15:16:42.12:477,42,0	1/1:2,28:29:78.05:851,78,0	1/1:0,16:16:42.12:476,42,0	0/0:15,0:15:39.13:0,39,533	0/0:26,0:26:69.07:0,69,847	1/1:2,17:19:36.10:407,36,0	1/1:0,29:29:87.23:974,87,0	1/1:2,27:29:78.22:885,78,0	1/1:0,7:7:21.06:238,21,0
chr10	35452187	.	TAAA	T	18276.64	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-1.598;DP=540;FS=0.721;HRun=7;HaplotypeScore=94.6976;InbreedingCoeff=0.9564;MQ=73.19;MQ0=0;MQRankSum=-7.346;QD=36.19;ReadPosRankSum=5.364;VQSLOD=3.4524;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,33:37:81.74:1241,82,0	1/1:2,8:10:21.07:322,21,0	0/0:22,0:22:54.12:0,54,962	0/0:13,0:13:30.10:0,30,645	1/1:1,12:13:30.10:460,30,0	1/1:0,11:11:33.11:506,33,0	1/1:3,22:25:57.19:874,57,0	1/1:4,24:28:69.21:1036,69,0	1/1:4,22:26:66.22:1012,66,0	1/1:0,14:14:32.84:505,33,0	1/1:0,10:10:21.07:322,21,0	1/1:0,22:22:66.22:1012,66,0	1/1:0,20:20:54.18:828,54,0	1/1:0,22:22:57.19:874,57,0	1/1:1,15:16:42.14:644,42,0	1/1:1,20:21:57.19:874,57,0	1/1:5,33:38:84.28:1288,84,0	1/1:0,18:18:48.16:736,48,0	1/1:4,10:14:27.08:414,27,0	1/1:0,10:10:24.08:368,24,0	1/1:2,23:25:36.92:595,37,0	1/1:0,6:6:15.05:230,15,0	1/1:2,15:17:39.13:598,39,0	1/1:5,25:30:60.19:920,60,0	1/1:4,10:14:27.09:413,27,0	1/1:1,26:27:78.26:1196,78,0	1/1:2,25:27:57.19:873,57,0	1/1:1,3:4:9.03:137,9,0
chr10	35453153	.	TA	T	8914.82	PASS	AB=1.000;AC=39;AF=0.696;AN=56;BaseQRankSum=-13.468;DP=662;FS=5.718;HRun=10;HaplotypeScore=80.4161;InbreedingCoeff=0.9243;MQ=73.21;MQ0=0;MQRankSum=-1.526;QD=19.38;ReadPosRankSum=0.929;VQSLOD=5.7372;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,32:38:85.33:752,85,0	1/1:1,6:7:18:156,18,0	0/0:15,0:16:32.90:0,33,330	0/1:6,0:7:8.50:8,0,112	0/0:9,0:36:82.95:0,83,442	1/1:2,27:29:65.98:573,66,0	1/1:2,18:20:41.99:365,42,0	1/1:10,25:35:74.79:626,75,0	0/0:5,0:22:54.59:0,55,319	1/1:4,16:20:47.65:397,48,0	1/1:2,15:17:38.98:338,39,0	0/0:22,0:22:60.11:0,60,635	1/1:1,23:24:68.99:599,69,0	1/1:1,17:19:44.02:371,44,0	1/1:1,24:25:65.98:573,66,0	0/0:5,0:30:68.45:0,68,376	0/0:3,0:20:48.63:0,49,278	1/1:4,19:24:41.91:427,42,0	1/1:4,19:24:58.96:489,59,0	1/1:6,28:35:55.78:695,56,0	1/1:2,23:26:56.02:475,56,0	1/1:5,22:27:56.93:488,57,0	0/0:30,0:30:69.19:0,69,763	0/0:26,0:26:72.14:0,72,774	1/1:3,19:22:41.99:365,42,0	1/1:4,21:25:62.97:543,63,0	1/1:4,22:26:56.97:495,57,0	1/1:1,9:10:21:182,21,0
chr10	35453965	.	C	CTTCTTTTTTTTT	12149.29	PASS	AB=1.000;AC=46;AF=0.821;AN=56;BaseQRankSum=4.984;DP=419;FS=6.515;HRun=0;HaplotypeScore=157.2367;InbreedingCoeff=0.2900;MQ=61.96;MQ0=1;MQRankSum=-5.681;QD=31.15;ReadPosRankSum=-2.012;VQSLOD=3.7781;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:21:17.43:700,17,0	1/1:4,0:3:9.03:179,9,0	0/0:14,0:11:16.16:0,16,255	0/0:12,0:10:3.85:0,4,97	1/1:16,0:15:11.39:126,11,0	0/1:18,0:18:23.73:964,0,24	1/1:14,0:10:18.21:448,18,0	0/1:34,0:28:40.31:828,0,40	1/1:7,0:6:9.02:256,9,0	0/1:24,0:23:43.59:334,0,44	1/1:14,0:13:26.60:347,27,0	1/1:5,0:5:6:117,6,0	1/1:11,0:11:18.05:485,18,0	1/1:11,0:10:12.01:194,12,0	1/1:12,0:12:15.04:425,15,0	1/1:22,0:22:54.15:1069,54,0	0/1:26,0:24:30.58:373,0,31	1/1:11,0:10:15.03:547,15,0	1/1:22,0:20:13.16:703,13,0	1/1:18,0:15:27.05:379,27,0	0/0:3,0:3:0:0,0,0	1/1:12,0:12:6.54:712,7,0	1/1:8,0:8:15.05:301,15,0	1/1:8,0:8:21.06:464,21,0	1/1:13,0:12:24.05:469,24,0	1/1:29,0:27:32.53:962,33,0	1/1:14,6:20:15.01:581,15,0	1/1:6,0:5:9.02:183,9,0
chr10	35453968	.	C	CTTTTTTTTTTTT	15788.08	PASS	AB=1.000;AC=53;AF=0.946;AN=56;BaseQRankSum=-2.154;DP=416;FS=4.220;HRun=13;HaplotypeScore=131.2357;InbreedingCoeff=0.3330;MQ=57.11;MQ0=4;MQRankSum=-3.436;QD=37.95;ReadPosRankSum=-0.819;VQSLOD=2.3552;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:22:40.51:923,41,0	1/1:4,0:3:9.03:244,9,0	0/1:12,0:9:0.31:0,0,133	0/1:11,0:9:23.76:24,0,28	1/1:5,9:22:11.07:185,11,0	1/1:18,0:18:42.14:1324,42,0	1/1:14,0:10:24.05:615,24,0	1/1:33,0:25:34.93:965,35,0	1/1:7,0:6:11.99:336,12,0	1/1:22,0:21:30.08:529,30,0	1/1:14,0:13:24.97:506,25,0	1/1:5,0:5:6.02:158,6,0	1/1:9,0:8:18.06:614,18,0	1/1:9,0:8:12.04:280,12,0	1/1:10,0:10:15.05:525,15,0	1/1:20,0:20:54.19:1455,54,0	1/1:27,0:24:24.93:567,25,0	1/1:11,0:10:15.05:448,15,0	1/1:23,0:21:30.10:871,30,0	1/1:18,0:15:27.09:577,27,0	0/1:3,0:3:0:0,0,0	1/1:12,0:12:30.10:742,30,0	1/1:8,0:8:15.05:303,15,0	1/1:8,0:8:21.07:606,21,0	1/1:13,0:11:24.08:645,24,0	1/1:28,0:26:57.15:1411,57,0	1/1:24,0:20:15.94:689,16,0	1/1:6,0:5:9.03:247,9,0
chr10	35454325	.	C	CCTGTCTGCAAT	63909.62	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-6.863;DP=742;FS=1.865;HRun=0;HaplotypeScore=181.3588;InbreedingCoeff=0.9916;MQ=80.37;MQ0=3;MQRankSum=-11.415;QD=93.85;ReadPosRankSum=3.808;VQSLOD=5.0197;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:13,14:32:51.13:2140,51,0	1/1:3,5:11:24.08:968,24,0	0/0:34,0:34:90.22:0,90,2313	0/0:27,0:27:54.17:0,54,1607	1/1:14,10:25:42.10:1688,42,0	1/1:10,14:26:45.11:2051,45,0	1/1:5,16:25:33.08:1419,33,0	1/1:37,19:60:99:6244,156,0	1/1:8,22:30:66.19:3377,66,0	1/1:12,14:33:75.24:3240,75,0	1/1:5,9:16:27.09:1108,27,0	1/1:10,20:34:63.17:3299,63,0	1/1:7,15:22:54.11:2520,54,0	1/1:12,13:30:57.11:2578,57,0	1/1:8,29:41:99:4962,102,0	1/1:5,19:26:60.21:3245,60,0	1/1:9,12:23:36.04:1662,36,0	1/1:8,7:16:30.10:1371,30,0	1/1:10,14:25:69.24:3057,69,0	1/1:10,11:25:48.16:1622,48,0	1/1:12,5:19:21.03:654,21,0	1/1:10,15:27:59.98:2704,60,0	1/1:5,9:15:39.09:1793,39,0	1/1:11,14:23:39.09:1794,39,0	1/1:6,5:12:21.07:914,21,0	1/1:11,26:39:99:5358,105,0	1/1:5,16:25:54.19:3021,54,0	1/1:3,11:16:21.07:1120,21,0
chr10	35455482	.	C	CT	1954.68	PASS	AB=0.922;AC=42;AF=0.750;AN=56;BaseQRankSum=1.482;DP=420;FS=0.000;HRun=8;HaplotypeScore=164.6962;InbreedingCoeff=0.0932;MQ=56.22;MQ0=4;MQRankSum=-2.528;QD=5.16;ReadPosRankSum=-3.428;VQSLOD=-0.6446;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:24,1:23:32.83:38,0,33	1/1:4,3:7:18.67:156,19,0	0/1:15,1:10:10:10,0,141	0/0:8,0:4:3:0,3,27	1/1:23,2:26:1.66:104,2,0	1/1:11,5:15:4.85:136,5,0	1/1:8,2:9:5.98:53,6,0	0/1:17,1:18:4.57:90,0,5	1/1:12,0:10:14.15:81,14,0	1/1:13,1:13:9.19:79,9,0	1/1:21,5:26:8.77:227,9,0	0/0:0,0:13:8.26:0,8,32	1/1:9,2:11:8.61:66,9,0	1/1:8,2:9:11.84:89,12,0	1/1:9,1:10:10.11:57,10,0	0/1:11,0:10:4.26:21,0,4	1/1:16,0:15:10.02:56,10,0	1/1:14,2:15:5.67:108,6,0	1/1:18,2:20:10.96:162,11,0	1/1:21,1:23:14.93:181,15,0	1/1:5,0:4:1.25:3,1,0	1/1:10,1:11:2.27:105,2,0	0/0:2,0:15:7.66:0,8,43	1/1:10,0:10:0.19:22,0,0	0/1:11,0:11:6.66:45,0,7	0/1:21,2:23:1.53:95,0,2	0/1:13,2:15:16.12:59,0,16	0/1:6,2:8:7.25:58,0,7
chr10	35455512	.	GTTGGTTTT	G	6998.65	PASS	AB=0.900;AC=31;AF=0.554;AN=56;BaseQRankSum=-4.760;DP=390;FS=8.634;HRun=0;HaplotypeScore=144.3766;InbreedingCoeff=-0.0906;MQ=44.35;MQ0=10;MQRankSum=-2.617;QD=22.50;ReadPosRankSum=5.232;VQSLOD=3.5652;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:17,1:15:79.65:162,0,80	0/1:6,0:6:5.70:37,0,6	0/0:17,0:6:14.97:0,15,215	0/0:12,0:4:8.40:0,8,76	0/1:25,1:25:56.63:597,0,57	1/1:15,1:14:26.68:313,27,0	1/1:11,0:10:1.53:186,2,0	0/1:9,13:22:22.99:736,0,23	0/1:10,0:9:15.11:219,0,15	1/1:11,0:10:2.45:253,2,0	0/1:26,2:28:72.25:648,0,72	0/0:11,0:8:24.08:0,24,374	0/1:4,3:6:1.87:290,0,2	1/1:8,0:7:15:160,15,0	0/1:8,7:14:25.54:392,0,26	0/1:7,0:6:0.83:81,0,1	0/1:12,0:10:8.68:304,0,9	0/1:12,0:10:0.51:32,0,1	1/1:5,11:16:26.57:645,27,0	1/1:12,11:21:0.79:420,1,0	1/1:4,0:3:3.01:45,3,0	0/1:7,0:7:69.34:105,0,69	0/0:22,0:21:61.04:0,61,884	0/0:16,0:14:24.64:0,25,292	0/1:7,0:7:24.55:126,0,25	0/1:19,0:18:18.68:546,0,19	0/1:6,7:13:29.95:207,0,30	1/1:6,6:10:26.82:495,27,0
chr10	35455516	.	GTTTT	G	6950.63	PASS	AB=0.761;AC=43;AF=0.768;AN=56;BaseQRankSum=-3.630;DP=397;FS=43.213;HRun=13;HaplotypeScore=120.5284;InbreedingCoeff=0.0607;MQ=41.77;MQ0=15;MQRankSum=-1.700;QD=18.99;ReadPosRankSum=2.168;VQSLOD=0.2610;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:9,11:16:58.98:196,0,59	1/1:2,3:5:5.99:88,6,0	0/0:16,0:6:13.85:0,14,178	0/0:15,0:3:8.63:0,9,65	1/1:9,16:26:25.44:642,25,0	1/1:3,13:14:27.09:392,27,0	1/1:2,10:11:18.04:263,18,0	1/1:21,2:22:45.06:637,45,0	1/1:8,4:10:20.52:290,21,0	1/1:5,7:11:18.03:262,18,0	0/1:11,18:28:26.14:621,0,26	0/1:12,0:8:1.33:1,0,39	1/1:4,2:6:15.04:211,15,0	1/1:2,6:7:15.05:206,15,0	0/1:12,3:13:15.85:273,0,16	1/1:2,5:6:9.01:132,9,0	1/1:10,2:10:5.17:218,5,0	1/1:4,8:11:3.87:46,4,0	1/1:15,0:13:36.09:473,36,0	1/1:17,6:21:33.08:454,33,0	1/1:1,4:4:2.99:44,3,0	0/1:4,3:7:29.92:113,0,30	0/1:19,0:18:24.07:24,0,160	1/1:16,0:13:2.56:81,3,0	0/1:4,2:7:23.91:162,0,24	0/1:2,15:16:7.29:562,0,7	1/1:10,3:13:16.28:217,16,0	0/1:10,3:12:51.60:345,0,52
chr10	35455529	.	TA	T	753.68	PASS	AB=1.000;AC=8;AF=0.143;AN=56;BaseQRankSum=-2.689;DP=395;FS=0.787;HRun=3;HaplotypeScore=114.5178;InbreedingCoeff=0.5221;MQ=41.13;MQ0=36;MQRankSum=-2.037;QD=10.77;ReadPosRankSum=0.701;VQSLOD=1.5603;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:14:5.94:0,6,52	0/0:4,0:3:8.55:0,9,44	0/0:16,0:6:5.74:0,6,36	0/0:11,1:3:5.33:0,5,20	0/0:30,0:29:51.91:0,52,276	0/0:15,0:14:25.18:0,25,114	0/0:14,0:10:16.79:0,17,76	0/0:27,0:19:52.23:0,52,302	0/0:13,0:9:22.06:0,22,108	0/0:12,0:12:25.88:0,26,155	0/0:28,0:27:57.17:0,57,297	1/1:2,9:7:21:227,21,0	0/0:7,0:5:13.99:0,14,64	0/0:7,0:7:14.19:0,14,76	0/0:12,0:11:22.59:0,23,116	0/0:9,0:7:11.42:0,11,58	0/0:9,0:8:16.20:0,16,76	0/1:11,0:9:17.61:18,0,24	0/0:16,0:12:34.78:0,35,202	0/0:22,0:19:36.53:0,37,186	0/0:8,0:6:5.77:0,6,32	0/0:8,0:7:8.48:0,8,52	1/1:7,14:19:2.30:451,2,0	1/1:2,11:9:18.04:191,18,0	0/0:10,0:8:7.28:0,7,97	0/0:16,0:15:42.20:0,42,212	0/0:13,0:13:16.95:0,17,80	0/1:14,0:12:3.42:3,0,55
chr10	35455713	.	GT	G	937.98	PASS	AB=0.967;AC=42;AF=0.750;AN=56;BaseQRankSum=5.686;DP=442;FS=4.838;HRun=15;HaplotypeScore=131.0673;InbreedingCoeff=0.6185;MQ=38.06;MQ0=47;MQRankSum=-4.481;QD=3.55;ReadPosRankSum=2.840;VQSLOD=1.1490;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:10:7.62:38,8,0	1/1:5,1:8:19.41:80,19,0	0/0:40,1:7:16.51:0,17,104	0/0:47,1:9:7.35:0,7,34	0/0:21,0:22:33.22:0,33,150	1/1:6,1:5:4.97:25,5,0	1/1:4,1:6:8.33:25,8,0	1/1:8,1:5:8.49:49,8,0	0/0:8,0:5:7.54:0,8,35	1/1:6,3:11:19.96:97,20,0	1/1:10,1:11:10.23:46,10,0	1/1:12,0:11:0.99:5,1,0	1/1:5,1:5:9.22:37,9,0	1/1:5,0:4:4.06:12,4,0	1/1:7,0:2:1.95:6,2,0	0/0:11,0:12:27.55:0,28,123	0/0:36,0:38:41.58:0,42,227	1/1:13,4:10:15.20:63,15,0	1/1:8,3:6:12.45:67,12,0	1/1:11,5:17:21.42:116,21,0	1/1:10,3:9:4.37:15,4,0	1/1:8,0:11:23.12:91,23,0	0/1:13,1:14:7.93:24,0,8	1/1:12,1:13:4.51:24,5,0	1/1:13,1:13:20.61:81,21,0	1/1:17,2:21:37.59:131,38,0	1/1:12,2:16:20.13:79,20,0	0/1:9,0:9:7.89:8,0,14
chr10	35455718	.	TTTTTTTTTTTG	T	9093.57	PASS	AB=0.868;AC=39;AF=0.696;AN=56;BaseQRankSum=2.963;DP=459;FS=3.946;HRun=0;HaplotypeScore=147.9863;InbreedingCoeff=0.4878;MQ=38.57;MQ0=58;MQRankSum=-3.838;QD=35.80;ReadPosRankSum=3.091;VQSLOD=4.1402;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:11,6:11:27.06:301,0,27	1/1:3,5:8:24.08:585,24,0	0/0:55,0:8:4.72:0,5,314	0/0:61,0:12:21.83:0,22,291	0/0:22,0:21:51.18:0,51,2286	1/1:4,2:4:9.03:196,9,0	1/1:4,4:6:17.58:359,18,0	1/1:8,1:5:8.94:146,9,0	0/0:8,0:5:9.03:0,9,378	1/1:8,3:11:30.08:597,30,0	1/1:7,6:11:25.50:387,26,0	0/1:11,0:10:8.05:139,0,8	1/1:2,4:5:14.97:343,15,0	1/1:1,4:4:8.65:196,9,0	1/1:4,3:2:2.56:92,3,0	0/0:14,0:13:36.12:0,36,1553	0/0:45,0:40:80.95:0,81,2952	1/1:11,5:8:18.06:577,18,0	0/1:9,1:6:17.86:217,0,18	1/1:8,7:15:34.07:628,34,0	1/1:12,0:9:11.58:169,12,0	1/1:4,7:11:30.06:743,30,0	0/1:13,0:13:8.24:202,0,8	1/1:13,0:13:6.02:90,6,0	1/1:7,8:14:17.17:756,17,0	1/1:12,10:18:51.13:1318,51,0	1/1:11,6:16:35.46:701,35,0	0/1:5,4:9:99:350,0,158
chr10	35455719	.	TTTTTTTTTTG	T	6299.37	PASS	AB=0.888;AC=40;AF=0.714;AN=56;BaseQRankSum=6.099;DP=466;FS=5.793;HRun=0;HaplotypeScore=154.6011;InbreedingCoeff=0.5582;MQ=38.30;MQ0=59;MQRankSum=-4.280;QD=24.70;ReadPosRankSum=3.272;VQSLOD=4.0401;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:17,0:11:15.87:201,0,16	1/1:8,0:8:23.66:377,24,0	0/0:56,0:8:9.30:0,9,247	0/0:66,0:14:19.55:0,20,271	0/0:21,0:20:51.18:0,51,2097	1/1:6,0:4:8.70:118,9,0	1/1:8,0:6:17.58:261,18,0	1/1:9,0:5:4.01:68,4,0	0/0:8,0:5:9.03:0,9,336	1/1:10,0:10:24.17:337,24,0	1/1:13,0:11:13.05:219,13,0	0/1:2,9:10:7.81:239,0,8	1/1:6,0:5:5.60:213,6,0	1/1:5,0:4:8.66:144,9,0	0/1:8,0:3:4.88:62,0,5	0/0:14,0:13:36.12:0,36,1399	0/0:45,0:40:80.23:0,80,2670	1/1:17,0:9:17.72:432,18,0	1/1:11,0:7:17.52:168,18,0	1/1:15,0:15:25.42:370,25,0	1/1:11,0:8:4.62:106,5,0	1/1:11,0:11:30.06:483,30,0	1/1:5,8:13:14.20:333,14,0	1/1:2,11:13:5.51:93,6,0	1/1:15,0:14:25.07:514,25,0	1/1:22,0:18:51.05:875,51,0	1/1:16,1:16:26.76:441,27,0	0/1:9,0:9:99:246,0,128
chr10	35455724	.	T	TTG	1684.71	PASS	AB=0.556;AC=7;AF=0.125;AN=56;BaseQRankSum=-7.895;DP=449;FS=3.569;HRun=0;HaplotypeScore=133.5036;InbreedingCoeff=0.5945;MQ=37.44;MQ0=52;MQRankSum=2.845;QD=20.30;ReadPosRankSum=-0.582;VQSLOD=3.7751;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:10:6.57:0,7,39	0/0:8,0:8:17.19:0,17,91	0/0:60,0:8:3.39:0,3,107	0/0:73,0:15:17.31:0,17,121	1/1:6,16:21:50.43:611,50,0	0/0:6,0:4:3.18:0,3,17	0/0:8,0:6:11.76:0,12,71	0/0:9,0:6:5.48:0,5,32	0/1:1,3:4:0:83,0,0	0/0:9,0:9:8.46:0,8,68	0/0:11,0:9:7.38:0,7,45	0/0:11,0:10:11.43:0,11,63	0/0:6,0:5:12.20:0,12,69	0/0:4,0:3:5.87:0,6,35	0/0:6,0:2:5.91:0,6,37	1/1:5,6:13:27.37:381,27,0	1/1:17,21:40:42.13:754,42,0	0/0:18,0:9:8.27:0,8,98	0/0:9,0:6:7.65:0,8,41	0/0:15,0:15:6.54:0,7,50	0/0:9,0:6:8.38:0,8,40	0/0:10,0:10:17.35:0,17,123	0/0:12,0:12:12.29:0,12,78	0/0:12,0:12:2.92:0,3,17	0/0:11,0:11:21.62:0,22,132	0/0:20,0:17:44.72:0,45,280	0/0:15,0:15:23.41:0,23,146	0/0:8,0:8:20.76:0,21,187
chr10	35455729	.	GT	G	122.11	PASS	AB=0.972;AC=23;AF=0.411;AN=56;BaseQRankSum=7.701;DP=464;FS=3.468;HRun=15;HaplotypeScore=146.3513;InbreedingCoeff=-0.1160;MQ=38.86;MQ0=37;MQRankSum=-2.530;QD=0.46;ReadPosRankSum=3.340;VQSLOD=-0.0367;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:15,1:10:16.91:47,0,17	1/1:9,0:9:3.15:33,3,0	0/0:62,0:9:7.22:0,7,115	0/1:77,0:16:0.91:1,0,89	0/0:24,0:24:58.40:0,58,712	0/1:4,1:4:0.99:1,0,14	0/0:10,0:8:1.94:0,2,39	0/1:7,0:6:2.83:3,0,15	0/0:6,0:5:9.03:0,9,105	0/0:12,0:12:11.67:0,12,67	0/0:13,0:11:0.75:0,1,52	0/1:10,0:9:0.81:4,0,1	1/1:5,0:4:2.79:10,3,0	0/1:6,0:4:5.12:5,0,11	0/1:5,0:2:0.59:1,0,19	0/0:13,0:13:33.10:0,33,422	0/0:42,0:39:69.02:0,69,841	1/1:16,1:10:2.13:24,2,0	0/1:6,2:7:9.02:39,0,9	0/1:16,0:16:9.62:10,0,43	1/1:8,0:6:0.86:5,1,0	0/1:13,0:13:14.66:15,0,26	0/1:12,0:12:5.42:5,0,30	0/0:13,0:12:0.01:0,0,12	0/1:14,0:14:19:19,0,22	0/1:18,0:17:25.31:25,0,30	0/1:15,0:15:3.32:3,0,47	0/1:7,0:7:7.35:7,0,93
chr10	35455747	.	TG	T	2191.92	PASS	AB=0.815;AC=37;AF=0.661;AN=56;BaseQRankSum=5.120;DP=485;FS=1.622;HRun=2;HaplotypeScore=145.9351;InbreedingCoeff=0.4470;MQ=38.37;MQ0=37;MQRankSum=-1.285;QD=8.66;ReadPosRankSum=-0.395;VQSLOD=1.0239;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:12,6:13:14.41:84,14,0	0/1:2,5:7:1.07:91,0,1	0/0:60,0:12:10.77:0,11,238	0/0:85,0:16:20.42:0,20,270	0/0:25,0:25:61.30:0,61,816	1/1:6,2:7:5.92:34,6,0	1/1:10,4:12:10.35:142,10,0	1/1:8,2:9:13.50:70,14,0	0/0:6,0:5:8.94:0,9,105	0/1:9,3:12:29.08:134,0,29	1/1:8,7:13:32.82:178,33,0	0/1:10,0:9:4.71:5,0,12	1/1:2,4:5:8.87:67,9,0	1/1:7,4:9:20.34:129,20,0	1/1:6,3:7:4.83:45,5,0	0/0:14,0:14:35.95:0,36,470	0/0:40,0:38:61.89:0,62,967	1/1:7,8:11:13.77:127,14,0	1/1:3,2:4:11.89:87,12,0	1/1:7,7:14:36.82:212,37,0	1/1:8,0:6:10.80:58,11,0	0/1:7,7:14:11.96:129,0,12	0/1:9,0:9:9.53:10,0,44	0/1:13,0:12:3.37:3,0,29	1/1:6,8:14:31.08:217,31,0	0/1:9,10:19:18.26:237,0,18	1/1:11,7:18:7.24:207,7,0	1/1:0,4:4:12.01:113,12,0
chr10	35455750	.	TTTTTG	T	5967.35	PASS	AB=1.000;AC=44;AF=0.786;AN=56;BaseQRankSum=3.127;DP=492;FS=4.558;HRun=0;HaplotypeScore=156.5952;InbreedingCoeff=0.7109;MQ=39.23;MQ0=29;MQRankSum=-1.464;QD=19.44;ReadPosRankSum=-0.422;VQSLOD=4.1640;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,5:13:17.87:186,18,0	1/1:3,4:7:15.05:218,15,0	0/0:59,0:12:16.80:0,17,273	0/0:80,0:17:11.98:0,12,181	0/0:26,0:26:43.23:0,43,1018	1/1:7,2:8:12:123,12,0	1/1:10,4:12:30.01:391,30,0	1/1:12,0:11:17.84:198,18,0	0/0:6,0:5:9.03:0,9,145	0/1:12,0:12:6.99:240,0,7	1/1:11,5:14:35.96:412,36,0	1/1:11,0:10:13.54:142,14,0	1/1:5,3:7:12:155,12,0	1/1:8,4:10:21.04:276,21,0	1/1:8,1:7:15.51:179,16,0	0/0:13,0:13:29.88:0,30,577	0/1:43,0:40:21.73:22,0,1129	1/1:10,5:11:23.98:346,24,0	1/1:4,1:4:12:143,12,0	1/1:9,5:14:36.06:451,36,0	1/1:9,0:7:14.96:198,15,0	1/1:11,3:14:24.07:323,24,0	1/1:9,0:9:16.06:137,16,0	1/1:14,0:13:3.01:48,3,0	1/1:8,6:14:37.36:487,37,0	1/1:14,5:19:39.12:546,39,0	1/1:12,7:19:42.05:548,42,0	1/1:0,4:4:12.04:196,12,0
chr10	35455754	.	TG	T	4239.61	PASS	AB=0.787;AC=34;AF=0.607;AN=56;BaseQRankSum=-0.223;DP=489;FS=6.513;HRun=1;HaplotypeScore=141.6718;InbreedingCoeff=0.2811;MQ=41.24;MQ0=21;MQRankSum=0.107;QD=15.31;ReadPosRankSum=1.866;VQSLOD=4.8168;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,11:14:17.87:179,18,0	0/1:6,3:9:19.05:81,0,19	0/0:47,1:11:17.48:0,17,234	0/0:71,1:18:24.61:0,25,280	0/0:26,0:26:51.38:0,51,661	1/1:3,8:10:12:141,12,0	1/1:7,7:12:12.29:311,12,0	1/1:8,6:14:29.32:284,29,0	0/0:7,0:6:8.84:0,9,67	0/1:7,6:13:40.77:234,0,41	1/1:10,6:14:35.04:400,35,0	1/1:12,0:11:11.48:74,11,0	0/1:5,3:7:2.68:69,0,3	1/1:4,9:11:20.96:244,21,0	0/1:4,6:8:18.50:148,0,18	0/0:13,0:13:32.67:0,33,340	0/0:42,0:39:38.73:0,39,828	0/1:11,5:12:0.99:139,0,1	1/1:3,2:4:9.87:105,10,0	1/1:7,8:15:36.07:458,36,0	1/1:4,6:9:4.18:137,4,0	0/1:10,4:14:42.12:185,0,42	0/1:9,0:9:7.27:28,0,7	0/1:13,0:12:4.67:8,0,5	1/1:9,5:14:13.29:290,13,0	0/1:16,3:19:99:208,0,126	0/1:10,9:19:23.74:434,0,24	1/1:4,0:4:11.90:84,12,0
chr10	35455755	.	G	GTTTTGT	3768.55	PASS	AB=0.923;AC=26;AF=0.464;AN=56;BaseQRankSum=-10.732;DP=487;FS=0.588;HRun=0;HaplotypeScore=173.9380;InbreedingCoeff=-0.1808;MQ=41.80;MQ0=20;MQRankSum=2.932;QD=11.81;ReadPosRankSum=-5.220;VQSLOD=1.2705;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:18,0:13:34.75:54,0,35	0/0:9,0:9:8.73:0,9,61	0/0:46,0:11:7.54:0,8,48	0/0:70,0:18:7.05:0,7,69	1/1:13,13:27:36.12:921,36,0	0/1:11,0:10:29.75:67,0,30	0/1:13,0:12:15.43:15,0,82	1/1:14,0:14:15.64:274,16,0	1/1:7,0:6:6.02:193,6,0	0/1:9,0:12:29.44:50,0,29	0/1:15,0:14:11.61:12,0,76	0/1:10,0:11:16.23:117,0,16	0/0:8,0:7:8.59:0,9,60	0/0:13,0:11:20.26:0,20,127	0/1:10,0:9:24.97:25,0,87	1/1:7,6:15:21.07:586,21,0	1/1:39,4:40:53.80:1042,54,0	0/1:14,0:13:37.73:69,0,38	0/1:5,0:5:26.47:26,0,37	0/1:15,0:15:77.87:78,0,94	0/1:10,0:9:9.92:31,0,10	0/1:12,0:13:21.61:22,0,56	0/1:8,0:9:47.40:81,0,47	0/1:13,0:12:15.75:82,0,16	0/0:14,0:15:12.27:0,12,124	0/1:13,0:18:16.32:16,0,152	0/1:18,0:18:6.83:7,0,162	0/0:4,0:4:11.97:0,12,94
chr10	35456339	.	TG	T	1792.49	PASS	AB=0.947;AC=10;AF=0.179;AN=56;BaseQRankSum=7.102;DP=544;FS=3.266;HRun=10;HaplotypeScore=62.5043;InbreedingCoeff=0.7820;MQ=79.20;MQ0=0;MQRankSum=1.057;QD=13.28;ReadPosRankSum=3.712;VQSLOD=3.7110;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:33.09:0,33,364	0/0:13,0:13:36.06:0,36,374	0/1:27,0:22:1.87:2,0,169	0/0:18,0:16:18.25:0,18,209	1/1:5,23:28:65.93:566,66,0	0/0:24,1:25:31.20:0,31,612	0/0:23,1:24:31.11:0,31,571	0/0:18,0:20:26.57:0,27,227	1/1:2,19:21:53.98:469,54,0	0/0:23,0:23:41.98:0,42,444	0/0:22,1:23:20.10:0,20,400	0/1:15,2:17:6.81:7,0,386	0/0:23,0:23:51.11:0,51,547	0/0:17,0:17:39.09:0,39,419	0/0:14,0:14:36.08:0,36,389	1/1:3,23:26:62.98:547,63,0	1/1:2,14:16:41.99:365,42,0	0/0:13,0:13:33.07:0,33,355	0/0:17,0:17:45:0,45,456	0/0:13,1:15:3.85:0,4,245	0/0:25,1:26:37.09:0,37,620	0/0:16,0:16:36.10:0,36,397	0/0:22,0:22:51.07:0,51,530	0/0:16,0:18:47.96:0,48,512	0/0:13,0:13:36.02:0,36,368	0/0:15,0:15:39.07:0,39,407	0/0:22,0:21:55.94:0,56,592	0/0:17,0:17:48.09:0,48,518
chr10	35456783	.	AT	A	11373.52	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=7.652;DP=586;FS=14.875;HRun=8;HaplotypeScore=86.2520;InbreedingCoeff=0.9966;MQ=77.43;MQ0=0;MQRankSum=0.084;QD=24.25;ReadPosRankSum=2.056;VQSLOD=4.1363;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,20:22:23.91:488,24,0	1/1:3,10:13:30.04:290,30,0	0/0:12,0:12:33.08:0,33,369	0/0:15,0:14:24.49:0,24,261	0/0:28,0:28:75.22:0,75,894	1/1:2,26:28:75.12:724,75,0	1/1:0,10:10:24.04:232,24,0	1/1:1,18:19:54.08:521,54,0	0/0:16,0:16:39.12:0,39,471	1/1:2,24:26:72.10:691,72,0	1/1:3,32:35:93.15:898,93,0	1/1:5,12:17:27.03:261,27,0	1/1:2,13:15:39.06:376,39,0	1/1:1,19:20:48.08:463,48,0	1/1:1,23:24:66.11:637,66,0	0/0:23,0:23:54.17:0,54,652	0/0:23,0:23:66.20:0,66,797	1/1:5,17:22:18.75:397,19,0	1/1:2,10:12:30.05:289,30,0	1/1:4,28:32:84.09:802,84,0	1/1:2,18:20:51.08:492,51,0	1/1:2,22:24:62.69:608,63,0	1/1:2,27:29:78.02:753,78,0	1/1:1,13:13:29.96:277,30,0	1/1:2,19:21:45.07:435,45,0	1/1:1,22:23:66.10:637,66,0	1/1:1,32:33:87.14:840,87,0	1/1:1,9:10:27.04:261,27,0
chr10	35456844	.	G	GACACACAC	7534.32	PASS	AB=0.833;AC=51;AF=0.944;AN=54;BaseQRankSum=-1.045;DP=530;FS=0.000;HRun=0;HaplotypeScore=201.3860;InbreedingCoeff=0.2564;MQ=53.87;MQ0=3;MQRankSum=-0.342;QD=15.44;ReadPosRankSum=-0.108;VQSLOD=3.9083;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:20:5.14:70,5,0	1/1:10,2:13:12.04:333,12,0	0/0:20,0:12:3.01:0,3,49	./.	1/1:21,0:21:6.02:176,6,0	1/1:27,0:27:15.52:301,16,0	1/1:14,0:14:9.02:217,9,0	1/1:31,0:30:11.25:125,11,0	1/1:11,0:16:9.03:313,9,0	1/1:17,2:19:27.09:768,27,0	1/1:15,1:17:9.03:177,9,0	1/1:13,2:17:21.02:606,21,0	0/1:8,1:10:6.33:136,0,6	1/1:17,1:18:6.47:97,6,0	1/1:22,5:26:12.03:344,12,0	1/1:19,1:22:6.02:227,6,0	1/1:20,0:21:9.50:295,10,0	1/1:16,0:17:18.02:317,18,0	1/1:9,0:9:0.89:2,1,0	1/1:20,3:22:27.05:629,27,0	1/1:10,0:10:5.98:84,6,0	1/1:24,0:25:9:98,9,0	1/1:19,0:20:8.89:119,9,0	1/1:15,0:15:6:94,6,0	1/1:19,3:22:24.07:635,24,0	1/1:16,1:17:10.59:291,11,0	1/1:20,3:22:22.39:680,22,0	1/1:10,2:13:12.74:401,13,0
chr10	35458196	.	T	TCC	16346.53	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-16.992;DP=600;FS=4.878;HRun=6;HaplotypeScore=84.5897;InbreedingCoeff=0.9757;MQ=80.77;MQ0=0;MQRankSum=-6.049;QD=39.58;ReadPosRankSum=-0.972;VQSLOD=4.0880;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,29:31:72.25:1218,72,0	1/1:0,7:7:15.05:254,15,0	0/0:19,0:20:44.48:0,44,509	0/0:20,0:20:45.08:0,45,522	0/0:17,0:17:9.82:0,10,67	1/1:1,11:12:30.10:507,30,0	1/1:4,28:34:75.26:1256,75,0	1/1:5,21:26:63.19:1037,63,0	0/0:25,0:25:52.80:0,53,180	1/1:2,13:17:44.64:717,45,0	1/1:0,13:13:39.13:660,39,0	0/0:25,0:26:47.73:0,48,181	1/1:2,26:28:69.23:1150,69,0	1/1:5,19:25:45.15:761,45,0	1/1:0,24:25:74.74:1226,75,0	0/0:21,0:21:36.93:0,37,132	0/0:18,0:18:40.53:0,41,138	1/1:2,14:16:39.13:660,39,0	1/1:2,16:19:45.13:719,45,0	1/1:2,13:15:30.06:477,30,0	1/1:3,51:54:99:2334,138,0	1/1:1,14:15:36.12:609,36,0	0/0:13,0:13:7.99:0,8,46	0/0:27,0:27:56.27:0,56,189	1/1:2,15:19:33.11:558,33,0	1/1:1,19:21:54.18:906,54,0	1/1:5,22:28:63.21:1045,63,0	1/1:0,8:8:15.05:254,15,0
chr10	35458200	.	C	CT	5855.24	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-15.538;DP=603;FS=0.361;HRun=0;HaplotypeScore=109.9568;InbreedingCoeff=0.9924;MQ=79.93;MQ0=0;MQRankSum=-3.710;QD=38.52;ReadPosRankSum=3.504;VQSLOD=4.6945;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:80.09:0,80,439	0/0:7,0:7:14.20:0,14,70	0/0:20,0:20:53.99:0,54,689	0/0:17,0:17:51.15:0,51,686	1/1:0,18:18:51.05:716,51,0	0/0:11,0:11:28.18:0,28,143	0/0:34,0:34:84.43:0,84,492	0/0:25,0:25:70.96:0,71,420	1/1:0,23:23:69.23:1056,69,0	0/0:17,0:17:37.93:0,38,254	0/0:14,0:14:40.21:0,40,220	1/1:2,27:29:69.23:1046,69,0	0/0:28,0:28:66.65:0,67,347	0/0:24,0:24:55.06:0,55,331	0/0:26,0:26:58.93:0,59,350	1/1:1,20:21:27.21:668,27,0	1/1:1,18:19:51.17:781,51,0	0/0:15,0:15:40.28:0,40,220	0/0:20,0:20:45.79:0,46,258	0/0:14,0:14:33.22:0,33,179	0/0:55,0:55:99:0,140,733	0/0:16,0:16:37.25:0,37,200	1/1:0,14:15:33.11:487,33,0	1/1:2,25:27:72.24:1102,72,0	0/0:19,0:19:31.63:0,32,167	0/0:22,0:22:63.19:0,63,369	0/0:26,0:26:56.43:0,56,300	0/0:8,0:8:14.11:0,14,69
chr10	35458641	.	TA	T	10458.33	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-5.231;DP=564;FS=1.163;HRun=10;HaplotypeScore=67.4758;InbreedingCoeff=0.9850;MQ=66.28;MQ0=1;MQRankSum=-0.972;QD=21.04;ReadPosRankSum=2.708;VQSLOD=5.8638;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,29:35:83.90:716,84,0	1/1:1,11:12:29.83:260,30,0	0/0:10,0:8:14.59:0,15,119	0/0:8,0:7:11.86:0,12,107	1/1:2,19:21:53.93:462,54,0	1/1:5,16:21:41.98:365,42,0	1/1:0,16:16:38.99:338,39,0	1/1:4,25:29:74.77:628,75,0	1/1:6,17:23:44.97:391,45,0	1/1:2,22:24:65.99:573,66,0	1/1:1,16:17:47.99:416,48,0	0/0:24,0:24:60.14:0,60,654	1/1:3,20:23:23.60:366,24,0	1/1:3,15:18:41.98:365,42,0	1/1:3,23:26:65.95:567,66,0	1/1:2,22:24:65.98:573,66,0	1/1:7,29:36:47.77:638,48,0	1/1:5,23:27:62.96:541,63,0	1/1:2,15:17:44.97:387,45,0	1/1:0,11:11:32.89:271,33,0	1/1:1,14:15:41.99:365,42,0	1/1:1,8:9:17.99:156,18,0	0/0:14,0:14:35.93:0,36,358	0/0:11,0:11:24:0,24,251	1/1:2,27:29:74.98:651,75,0	1/1:4,17:21:50.98:443,51,0	1/1:1,32:33:86.40:755,86,0	1/1:0,9:9:26.99:234,27,0
chr10	35458881	.	T	TA	3514.02	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-3.628;DP=632;FS=4.450;HRun=6;HaplotypeScore=77.0604;InbreedingCoeff=0.9971;MQ=75.96;MQ0=0;MQRankSum=-0.026;QD=30.82;ReadPosRankSum=2.129;VQSLOD=4.3181;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,37:44:96.31:1209,96,0	0/0:18,0:18:51.02:0,51,497	0/0:23,0:23:19.33:0,19,412	0/0:10,0:11:22.88:0,23,187	0/0:24,0:24:66.13:0,66,666	0/0:19,0:18:41.72:0,42,398	0/0:31,0:31:84.14:0,84,836	0/0:30,0:30:84.14:0,84,829	0/0:16,0:16:45.09:0,45,457	0/0:23,0:23:60.13:0,60,608	0/0:22,0:22:57.12:0,57,579	1/1:0,28:28:75.24:945,75,0	0/0:19,0:19:54.10:0,54,540	0/0:16,0:16:42.02:0,42,408	0/0:27,0:27:69.15:0,69,701	0/0:21,0:21:63.08:0,63,625	0/0:32,0:32:81.13:0,81,807	0/0:23,0:23:66.07:0,66,648	0/0:13,0:13:39.07:0,39,386	0/0:16,0:16:48.09:0,48,482	0/0:10,0:10:30.06:0,30,302	0/0:20,0:20:60.11:0,60,598	1/1:1,9:10:27.09:341,27,0	1/1:6,26:32:84.23:1019,84,0	0/0:29,0:29:75.17:0,75,765	0/0:39,0:39:99:0,102,1014	0/0:20,0:20:57.12:0,57,580	0/0:16,0:16:42.09:0,42,427
chr10	35459003	.	T	TCTC	3617.24	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-7.498;DP=685;FS=4.022;HRun=0;HaplotypeScore=164.7681;InbreedingCoeff=0.9965;MQ=83.58;MQ0=0;MQRankSum=-1.238;QD=44.66;ReadPosRankSum=-0.472;VQSLOD=4.8772;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:96.31:0,96,1546	0/0:10,0:10:27.97:0,28,397	0/0:24,0:24:60.04:0,60,867	0/0:27,0:27:56.55:0,57,861	0/0:25,0:25:63.21:0,63,1024	0/0:22,0:22:55.07:0,55,860	0/0:31,0:31:71.53:0,72,1075	0/0:32,0:32:73.18:0,73,1107	0/0:17,0:17:51.17:0,51,850	0/0:14,0:14:32.85:0,33,519	0/0:9,0:9:21.20:0,21,336	1/1:3,26:30:66.23:1494,66,0	0/0:30,0:30:75.24:0,75,1137	0/0:25,0:25:60.95:0,61,952	0/0:28,0:28:78.25:0,78,1217	0/0:25,0:25:66.21:0,66,1075	0/0:30,0:30:87.26:0,87,1397	0/0:18,0:18:48.12:0,48,697	0/0:20,0:20:44.01:0,44,646	0/0:15,0:15:45.14:0,45,690	0/0:46,0:46:99:0,127,1931	0/0:20,0:20:52.98:0,53,782	1/1:4,13:17:24.05:492,24,0	1/1:2,32:34:72.25:1631,72,0	0/0:23,0:23:65.09:0,65,1002	0/0:39,0:39:99:0,115,1770	0/0:32,0:31:86.40:0,86,1311	0/0:10,0:10:22.98:0,23,375
chr10	35465712	.	GACGTAC	G	9120.96	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=5.967;DP=659;FS=1.620;HRun=0;HaplotypeScore=183.2942;InbreedingCoeff=0.9960;MQ=69.14;MQ0=0;MQRankSum=-16.954;QD=50.67;ReadPosRankSum=0.933;VQSLOD=5.0993;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,35:42:90.31:2153,90,0	0/0:11,0:11:27.09:0,27,915	0/0:28,0:27:72.19:0,72,2278	0/0:23,0:22:62.60:0,63,1985	1/1:0,16:16:21.07:504,21,0	0/0:15,0:15:45.15:0,45,1595	0/0:33,0:33:93.28:0,93,3216	0/0:27,0:27:78.26:0,78,2678	1/1:1,20:21:41.68:1008,42,0	0/0:32,0:32:90.31:0,90,3213	0/0:13,0:13:39.12:0,39,1322	1/1:1,25:26:72.25:1712,72,0	0/0:30,0:30:87.30:0,87,3129	0/0:30,0:30:90.31:0,90,3238	0/0:32,0:32:96.33:0,96,3459	1/1:1,22:23:63.22:1510,63,0	1/1:5,19:24:39.13:937,39,0	0/0:31,0:31:90.31:0,90,3158	0/0:19,0:19:54.19:0,54,1946	0/0:11,0:11:33.11:0,33,1189	0/0:59,0:59:99:0,172,5933	0/0:13,0:13:33.11:0,33,1173	1/1:2,5:7:15.05:360,15,0	1/1:2,19:21:39.13:937,39,0	0/0:14,0:14:42.14:0,42,1484	0/0:31,0:31:87.30:0,87,2979	0/0:18,0:18:54.17:0,54,1833	0/0:9,0:9:24.08:0,24,865
chr10	35467027	.	GGTTTTTTTTT	G	431.37	PASS	AB=0.579;AC=5;AF=0.089;AN=56;BaseQRankSum=-0.815;DP=562;FS=5.676;HRun=0;HaplotypeScore=163.5312;InbreedingCoeff=0.7622;MQ=53.07;MQ0=50;MQRankSum=0.502;QD=9.18;ReadPosRankSum=-0.315;VQSLOD=2.2152;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:26:71.59:0,72,1592	0/0:9,0:8:24.02:0,24,739	0/0:36,0:11:8.23:0,8,205	0/0:36,0:12:9.28:0,9,133	0/0:27,0:26:50.35:0,50,695	0/0:14,0:14:41.97:0,42,1297	0/0:13,0:12:35.99:0,36,801	0/0:34,0:32:93.14:0,93,2273	0/0:15,0:14:39.07:0,39,561	0/0:24,0:21:62.91:0,63,1537	0/0:25,0:25:66.04:0,66,1783	1/1:13,2:15:19.72:432,20,0	0/0:13,0:12:27.82:0,28,733	0/0:19,0:16:45.13:0,45,1551	0/0:11,0:10:24.54:0,25,724	0/0:17,0:16:41.05:0,41,551	0/0:29,0:25:49.53:0,50,670	0/0:26,0:27:72.04:0,72,2302	0/0:18,0:16:47.65:0,48,914	0/0:17,0:17:51.12:0,51,1636	0/0:11,0:8:16.91:0,17,449	0/0:12,0:11:30.09:0,30,845	0/1:3,0:9:0.43:25,0,0	1/1:5,15:16:3.01:91,3,0	0/0:25,0:22:66.04:0,66,1665	0/0:20,0:19:57.16:0,57,2056	0/0:25,0:22:62.74:0,63,1197	0/0:8,0:6:15.04:0,15,589
chr10	35467357	.	G	GAAAC	4346.23	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=10.117;DP=612;FS=2.526;HRun=0;HaplotypeScore=105.4932;InbreedingCoeff=0.9686;MQ=69.20;MQ0=1;MQRankSum=-1.712;QD=24.42;ReadPosRankSum=-0.616;VQSLOD=4.7235;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,19:29:11.34:996,11,0	0/0:9,0:9:17.92:0,18,237	0/0:20,0:17:17.92:0,18,229	0/0:23,0:19:10.17:0,10,284	1/1:11,9:21:33.03:627,33,0	0/0:33,0:33:68.95:0,69,1058	0/0:16,0:16:45.13:0,45,701	0/0:39,0:39:75.24:0,75,1083	1/1:8,11:21:32.87:774,33,0	0/0:19,0:19:39.13:0,39,602	0/0:22,0:22:45.15:0,45,700	1/1:20,0:20:39.93:145,40,0	0/0:14,0:14:30.10:0,30,492	0/0:26,0:26:54.18:0,54,848	0/0:25,0:25:57.18:0,57,899	1/1:5,16:20:39.13:951,39,0	1/1:8,17:27:30.05:678,30,0	0/0:27,0:26:9.64:0,10,841	0/0:18,0:18:39.12:0,39,552	0/0:19,0:18:36.10:0,36,540	0/0:18,0:18:42.14:0,42,690	0/0:14,0:14:12.04:0,12,197	1/1:16,0:16:25.42:92,25,0	1/1:21,0:21:20.13:83,20,0	0/0:14,0:14:33.09:0,33,491	0/0:30,0:30:57.19:0,57,899	0/0:29,0:29:54.14:0,54,820	0/0:19,0:19:48.14:0,48,710
chr10	35467373	.	C	CAA	2551.14	PASS	AB=0.993;AC=11;AF=0.196;AN=56;BaseQRankSum=10.325;DP=604;FS=1.380;HRun=3;HaplotypeScore=83.3191;InbreedingCoeff=0.4287;MQ=63.38;MQ0=3;MQRankSum=-1.478;QD=14.17;ReadPosRankSum=7.003;VQSLOD=0.3918;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:26:99:158,0,194	0/0:8,0:8:24.08:0,24,333	0/0:22,0:18:45.14:0,45,595	0/0:19,0:15:11.27:0,11,487	0/1:23,0:22:45.53:46,0,362	0/0:31,0:31:87.28:0,87,1199	0/0:17,0:17:51.17:0,51,712	0/0:38,0:38:99:0,105,1440	0/1:21,0:21:99:101,0,197	0/0:21,0:21:57.15:0,57,772	0/0:20,0:20:57.17:0,57,775	1/1:1,20:21:48.16:880,48,0	0/0:14,0:14:39.11:0,39,526	0/0:22,0:22:66.22:0,66,918	0/0:23,0:23:63.21:0,63,880	0/1:19,0:18:68.94:154,0,69	0/1:26,0:27:99:142,0,159	0/0:31,0:31:77.59:0,78,1087	0/0:20,0:20:54.18:0,54,742	0/0:21,0:20:48.16:0,48,667	0/0:18,0:19:34.51:0,35,713	0/0:13,0:13:30.03:0,30,385	1/1:2,17:17:33.09:605,33,0	1/1:6,17:21:36.12:633,36,0	0/0:14,0:14:39.11:0,39,525	0/0:26,0:26:75.23:0,75,1027	0/0:24,0:24:66.22:0,66,907	0/0:21,0:21:63.21:0,63,875
chr10	35468979	.	G	GCTGA	8699.93	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-12.875;DP=746;FS=3.401;HRun=0;HaplotypeScore=122.9691;InbreedingCoeff=0.9662;MQ=74.76;MQ0=0;MQRankSum=-1.449;QD=34.66;ReadPosRankSum=5.404;VQSLOD=5.0609;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:20,29:50:60.17:1413,60,0	0/0:8,0:8:21.07:0,21,342	0/0:22,0:21:30.70:0,31,538	0/0:31,0:30:28.41:0,28,486	1/1:16,16:34:39.13:945,39,0	0/0:17,0:17:33.08:0,33,472	0/0:18,0:18:36.11:0,36,565	0/0:36,0:36:75.19:0,75,1094	1/1:9,21:30:48.16:1155,48,0	0/0:35,0:35:60.19:0,60,924	0/0:11,0:11:15.02:0,15,197	1/1:10,21:34:48.16:1172,48,0	0/0:33,0:33:78.26:0,78,1255	0/0:29,0:29:69.21:0,69,1061	0/0:40,0:40:99:0,105,1673	1/1:7,20:27:51.18:1246,51,0	1/1:7,16:23:45.15:1099,45,0	0/0:18,0:18:42.13:0,42,656	0/0:26,0:26:33.07:0,33,448	0/0:22,0:22:45.14:0,45,709	0/0:40,0:42:87.22:0,87,1325	0/0:27,0:27:39.12:0,39,608	1/1:14,9:23:18.06:440,18,0	1/1:7,23:30:51.17:1230,51,0	0/0:20,0:20:36.10:0,36,541	0/0:28,0:28:57.19:0,57,934	0/0:26,0:26:48.15:0,48,761	0/0:6,0:6:2.99:0,3,24
chr10	35469282	.	T	TACAC	14900.75	PASS	AB=0.626;AC=41;AF=0.732;AN=56;BaseQRankSum=-10.514;DP=909;FS=3.692;HRun=0;HaplotypeScore=158.4224;InbreedingCoeff=0.6786;MQ=60.01;MQ0=8;MQRankSum=3.320;QD=21.75;ReadPosRankSum=1.644;VQSLOD=4.8527;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:45:81.17:0,81,1166	1/1:3,5:9:8.77:158,9,0	0/0:42,0:25:20.06:0,20,222	0/0:40,0:25:10.52:0,11,128	0/1:9,0:19:83.92:84,0,134	1/1:7,16:24:26.83:589,27,0	1/1:14,15:31:20.81:450,21,0	1/1:20,13:35:41.47:522,41,0	1/1:13,0:42:3.12:135,3,0	1/1:12,33:47:47.40:1785,47,0	1/1:7,11:20:26.83:560,27,0	0/0:6,0:32:41.43:0,41,410	1/1:8,20:28:30.10:729,30,0	1/1:10,20:32:35.86:812,36,0	1/1:7,27:36:56.93:1325,57,0	0/1:17,0:41:99:133,0,217	0/1:8,0:29:58.89:109,0,59	1/1:7,12:21:23.81:458,24,0	1/1:12,15:26:46.39:787,46,0	1/1:10,11:22:23.40:461,23,0	1/1:31,48:82:79.65:1776,80,0	1/1:7,21:29:44.30:1100,44,0	0/0:4,0:15:20.39:0,20,192	0/0:14,0:50:77.64:0,78,744	1/1:5,19:27:33.11:803,33,0	1/1:8,24:35:65.84:1159,66,0	1/1:10,18:29:30.09:661,30,0	1/1:5,8:15:17.53:305,18,0
chr10	35471764	.	AAC	A	365.54	PASS	AB=0.943;AC=13;AF=0.232;AN=56;BaseQRankSum=5.681;DP=494;FS=1.537;HRun=0;HaplotypeScore=133.7170;InbreedingCoeff=0.3496;MQ=53.88;MQ0=7;MQRankSum=-4.182;QD=2.09;ReadPosRankSum=-3.428;VQSLOD=1.8107;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:32,1:33:3.80:4,0,557	0/1:8,1:9:2.49:2,0,122	0/0:24,0:13:18:0,18,459	0/0:24,0:15:39.12:0,39,590	0/0:16,1:17:15.56:0,16,280	0/1:15,1:15:3.36:3,0,220	0/0:12,0:12:29.09:0,29,231	0/1:17,1:18:1.41:1,0,338	0/1:12,1:13:60.89:61,0,129	0/0:25,0:22:12.62:0,13,376	0/0:15,1:16:11.58:0,12,203	1/1:20,0:20:25.89:124,26,0	0/1:10,0:10:8.21:8,0,136	0/0:17,0:17:47.98:0,48,415	0/0:19,0:19:36.66:0,37,295	0/0:21,0:21:27.28:0,27,247	0/1:20,2:21:40.48:40,0,266	0/0:13,0:13:34.48:0,34,295	0/0:11,0:11:9.97:0,10,196	0/0:16,0:15:13.73:0,14,266	0/0:10,0:10:1.26:0,1,113	0/0:20,0:20:49.76:0,50,356	1/1:15,1:16:38.02:163,38,0	1/1:18,0:17:33.67:115,34,0	0/0:18,0:16:37.95:0,38,277	0/0:22,1:23:30.98:0,31,412	0/0:17,0:16:32.56:0,33,369	0/0:16,0:16:43.37:0,43,362
chr10	35471765	.	AC	A	1740.90	PASS	AB=0.965;AC=9;AF=0.161;AN=56;BaseQRankSum=1.025;DP=495;FS=0.000;HRun=1;HaplotypeScore=123.6037;InbreedingCoeff=0.5809;MQ=53.79;MQ0=8;MQRankSum=-1.508;QD=16.90;ReadPosRankSum=-2.009;VQSLOD=3.1281;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:41.97:0,42,433	0/0:8,1:9:10.41:0,10,99	0/0:24,0:13:33.50:0,33,394	0/0:24,0:15:39.11:0,39,490	0/1:15,1:16:15.74:16,0,183	0/0:16,0:15:31.36:0,31,205	0/0:12,0:12:33.62:0,34,187	0/0:18,0:18:37.78:0,38,296	0/1:13,0:13:24.45:24,0,78	0/0:24,1:22:50.81:0,51,330	0/0:16,0:16:39.98:0,40,220	1/1:7,13:20:41.17:630,41,0	0/0:9,0:9:7.35:0,7,111	0/0:17,0:17:46.62:0,47,276	0/0:23,0:23:38.76:0,39,260	0/1:19,1:20:22.77:23,0,144	0/0:23,0:21:25.44:0,25,215	0/0:13,0:13:34.83:0,35,237	0/0:11,0:11:27.83:0,28,200	0/0:16,0:15:35.85:0,36,241	0/0:9,0:9:17.16:0,17,102	0/0:20,0:20:54.89:0,55,318	1/1:6,10:16:45.13:591,45,0	1/1:4,14:17:48.10:615,48,0	0/0:18,0:16:41.75:0,42,230	0/0:23,0:23:56.32:0,56,364	0/0:17,0:16:42.07:0,42,314	0/0:16,0:16:43.34:0,43,263
chr10	35471766	.	C	CA	8672.20	PASS	AB=0.841;AC=46;AF=0.821;AN=56;BaseQRankSum=-3.900;DP=509;FS=11.769;HRun=8;HaplotypeScore=114.1951;InbreedingCoeff=0.7750;MQ=52.98;MQ0=8;MQRankSum=-3.046;QD=20.85;ReadPosRankSum=0.727;VQSLOD=3.6361;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:14,17:32:62.10:792,62,0	1/1:2,7:9:26.74:276,27,0	0/0:24,0:13:17.72:0,18,164	0/0:25,0:16:23.96:0,24,220	1/1:6,12:18:41.29:436,41,0	1/1:2,11:13:38.61:395,39,0	1/1:6,8:14:35.92:375,36,0	1/1:7,12:19:38.82:435,39,0	1/1:13,2:16:34.92:314,35,0	1/1:8,18:23:56.80:592,57,0	1/1:4,12:16:36.54:377,37,0	0/0:22,0:22:23.94:0,24,71	1/1:4,4:8:9.71:180,10,0	1/1:2,15:18:45.13:517,45,0	1/1:17,7:24:29:283,29,0	1/1:16,0:20:23.13:104,23,0	1/1:15,9:22:33.10:380,33,0	1/1:5,8:13:21.06:237,21,0	1/1:3,8:11:21.01:236,21,0	1/1:7,10:16:33.08:358,33,0	1/1:3,6:9:15.04:173,15,0	1/1:3,17:20:51.14:565,51,0	0/1:17,0:16:3.87:4,0,24	0/0:22,0:21:17.82:0,18,50	1/1:3,14:15:39.11:434,39,0	1/1:7,16:23:45.11:503,45,0	0/1:8,7:14:19.12:268,0,19	1/1:1,15:16:17.62:438,18,0
chr10	35471770	.	AAAAAC	A	7345.70	PASS	AB=0.995;AC=37;AF=0.661;AN=56;BaseQRankSum=-5.581;DP=515;FS=0.789;HRun=0;HaplotypeScore=151.3591;InbreedingCoeff=0.2710;MQ=50.84;MQ0=9;MQRankSum=0.697;QD=17.96;ReadPosRankSum=0.525;VQSLOD=4.5395;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:30:99:220,0,361	1/1:10,0:10:4.18:288,4,0	0/0:22,0:9:22.28:0,22,238	0/0:24,0:14:22.55:0,23,325	0/1:20,0:20:96.39:96,0,279	1/1:16,0:15:44.13:544,44,0	0/1:14,0:14:3.86:303,0,4	1/1:23,0:22:24.31:228,24,0	0/1:16,0:16:59.91:60,0,318	1/1:24,0:21:55.97:634,56,0	1/1:16,0:16:25.11:479,25,0	0/0:21,0:21:54.28:0,54,886	1/1:9,0:9:2.96:184,3,0	1/1:21,0:21:15.40:363,15,0	1/1:7,11:18:23.50:296,24,0	0/1:20,0:20:24.80:25,0,168	0/1:23,0:21:99:191,0,231	1/1:11,0:11:15.68:150,16,0	0/1:17,0:17:53.92:265,0,54	1/1:17,0:16:37.88:440,38,0	1/1:8,0:8:17.84:171,18,0	1/1:20,0:20:34.50:642,35,0	0/0:16,0:15:36:0,36,520	0/0:23,0:22:60.17:0,60,1118	1/1:19,0:17:44.23:535,44,0	1/1:20,0:20:38.59:579,39,0	0/1:19,1:19:5.51:386,0,6	0/1:17,0:16:89.81:266,0,90
chr10	35471787	.	C	CAA	4276.04	PASS	AB=0.975;AC=29;AF=0.518;AN=56;BaseQRankSum=-8.476;DP=526;FS=32.684;HRun=11;HaplotypeScore=146.2344;InbreedingCoeff=-0.0613;MQ=48.42;MQ0=19;MQRankSum=-1.477;QD=10.64;ReadPosRankSum=-0.226;VQSLOD=0.6573;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:31:66.84:545,67,0	0/1:14,1:15:62.09:152,0,62	0/0:24,0:8:2.95:0,3,43	0/0:29,0:10:13.09:0,13,71	1/1:11,9:19:38.77:493,39,0	0/1:18,0:15:70.91:113,0,71	0/1:12,0:12:17.06:82,0,17	0/1:24,1:24:38.42:137,0,38	1/1:9,5:15:40.92:450,41,0	0/1:23,1:21:63.35:224,0,63	0/1:16,0:16:29.57:125,0,30	0/0:21,0:21:41.37:0,41,200	0/0:9,0:9:17.59:0,18,69	0/1:13,0:13:0.08:46,0,0	1/1:19,0:19:6.98:164,7,0	1/1:6,7:15:11.51:108,12,0	1/1:9,13:21:34.14:440,34,0	0/1:14,0:14:32.65:57,0,33	0/1:18,0:18:24.52:174,0,25	0/1:15,0:14:55.15:55,0,70	0/1:10,0:8:18.82:41,0,19	1/1:16,2:18:6.99:291,7,0	0/0:15,0:15:15.35:0,15,123	0/0:24,0:23:44.20:0,44,194	0/1:19,0:17:12.17:256,0,12	0/1:21,0:22:80.07:116,0,80	0/1:18,0:19:54.18:54,0,61	0/1:16,0:15:0.66:154,0,1
chr10	35471793	.	AAAAAAC	A	9554.83	PASS	AB=1.000;AC=40;AF=0.714;AN=56;BaseQRankSum=-8.450;DP=522;FS=2.334;HRun=0;HaplotypeScore=158.1505;InbreedingCoeff=0.6385;MQ=48.43;MQ0=18;MQRankSum=-0.301;QD=24.07;ReadPosRankSum=-3.935;VQSLOD=4.1800;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:34,0:33:19.26:19,0,883	1/1:12,3:15:18.09:526,18,0	0/0:26,0:8:7.12:0,7,126	0/0:24,0:8:13.40:0,13,104	0/1:18,0:18:32.10:32,0,526	1/1:15,4:15:40.94:596,41,0	1/1:11,3:14:36.08:505,36,0	1/1:22,0:21:34.59:527,35,0	0/0:15,0:15:38.70:0,39,653	1/1:19,5:21:60.66:918,61,0	1/1:9,7:16:43:640,43,0	0/0:20,0:20:49.93:0,50,1041	1/1:9,1:10:18.87:221,19,0	1/1:11,0:11:22.31:237,22,0	1/1:15,2:17:28.90:383,29,0	0/1:18,0:18:5.93:6,0,347	0/1:24,0:22:79.66:80,0,403	1/1:14,1:15:42.60:464,43,0	1/1:20,2:21:8.59:544,9,0	1/1:11,4:14:36.08:534,36,0	1/1:9,1:8:20.98:249,21,0	1/1:10,7:17:47.72:730,48,0	0/0:15,0:14:39.05:0,39,618	0/0:25,0:24:63.08:0,63,1213	1/1:12,5:16:47.63:732,48,0	1/1:16,6:22:56.55:816,57,0	1/1:19,1:20:41.91:422,42,0	1/1:15,1:15:26.85:372,27,0
chr10	35471794	.	AAAAAC	A	6781.26	PASS	AB=1.000;AC=40;AF=0.714;AN=56;BaseQRankSum=-6.554;DP=517;FS=1.773;HRun=0;HaplotypeScore=157.4141;InbreedingCoeff=0.5881;MQ=47.15;MQ0=17;MQRankSum=0.248;QD=17.17;ReadPosRankSum=-4.487;VQSLOD=4.0044;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:34,0:33:99:127,0,637	1/1:15,0:15:0.11:290,0,0	0/0:25,0:7:4.20:0,4,106	0/0:24,0:8:13.45:0,13,109	0/1:18,0:17:34.92:35,0,447	1/1:17,1:15:37.42:400,37,0	1/1:13,0:13:35.98:423,36,0	1/1:21,1:21:26.67:345,27,0	0/0:15,0:15:41.82:0,42,603	1/1:25,0:22:62.72:594,63,0	1/1:14,1:15:42.13:436,42,0	0/0:20,0:20:50.81:0,51,884	1/1:9,1:10:23.52:232,24,0	1/1:10,1:11:29.27:306,29,0	1/1:18,0:18:33.45:296,33,0	0/1:18,0:18:6.50:6,0,292	0/1:24,0:22:50.71:51,0,361	1/1:15,0:15:41.97:343,42,0	1/1:22,0:21:11.90:367,12,0	1/1:16,0:15:38.68:350,39,0	1/1:10,0:8:20.61:175,21,0	1/1:17,0:17:45.65:460,46,0	0/0:15,0:14:39.08:0,39,555	0/0:23,0:22:63.02:0,63,1009	1/1:17,0:16:45.26:467,45,0	1/1:21,0:21:51.84:485,52,0	1/1:20,0:19:10.14:372,10,0	1/1:16,0:15:24.38:221,24,0
chr10	35471797	.	AAC	A	4233.60	PASS	AB=0.996;AC=41;AF=0.732;AN=56;BaseQRankSum=-2.564;DP=514;FS=7.121;HRun=0;HaplotypeScore=141.7193;InbreedingCoeff=0.4342;MQ=48.49;MQ0=16;MQRankSum=-0.198;QD=9.60;ReadPosRankSum=-4.363;VQSLOD=3.2954;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:32,1:32:98.77:99,0,274	1/1:14,1:15:14.40:175,14,0	0/1:24,0:7:4.34:4,0,77	0/1:23,0:8:14.68:15,0,45	0/1:18,0:17:28.22:28,0,194	1/1:18,0:15:26.13:215,26,0	1/1:13,0:13:34.53:256,35,0	1/1:23,0:22:27.78:203,28,0	0/0:15,0:15:38.39:0,38,298	1/1:25,0:22:57.77:363,58,0	1/1:16,0:16:42.80:301,43,0	0/0:20,0:20:53.43:0,53,398	1/1:9,0:9:18.17:113,18,0	1/1:10,0:10:28.87:190,29,0	1/1:18,0:18:30.49:169,30,0	0/1:17,0:17:6.99:7,0,112	0/1:24,0:22:30.34:30,0,164	1/1:17,0:17:44.34:252,44,0	1/1:22,0:21:29.23:284,29,0	1/1:15,1:15:35.82:230,36,0	0/1:10,0:8:1.47:50,0,1	1/1:18,0:18:42.77:331,43,0	0/0:14,0:14:38.82:0,39,326	0/0:23,0:22:62.07:0,62,412	1/1:15,2:16:41.85:249,42,0	1/1:22,0:22:44.59:305,45,0	1/1:20,0:19:9.82:191,10,0	1/1:13,0:12:24.54:172,25,0
chr10	35471798	.	A	AC	1402.12	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=-2.772;DP=512;FS=4.573;HRun=1;HaplotypeScore=146.2144;InbreedingCoeff=0.7733;MQ=48.84;MQ0=16;MQRankSum=1.686;QD=17.10;ReadPosRankSum=1.998;VQSLOD=4.0809;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:31:59.96:0,60,325	0/0:15,0:15:42.74:0,43,305	0/1:22,0:6:18.42:18,0,37	0/0:21,0:8:14.94:0,15,101	0/0:17,0:16:26.64:0,27,118	0/0:17,0:15:33.26:0,33,208	0/0:13,0:13:23.58:0,24,140	0/0:22,0:21:53.84:0,54,419	0/0:15,0:15:5.72:0,6,87	0/0:25,0:23:58.94:0,59,355	0/0:16,0:16:45.02:0,45,268	1/1:6,14:20:47.82:533,48,0	0/0:9,0:9:23.62:0,24,126	0/0:10,0:10:20.32:0,20,120	0/0:18,0:18:34.45:0,34,216	0/0:18,0:18:6.18:0,6,90	0/0:24,0:23:22.84:0,23,107	0/0:17,0:17:44.31:0,44,328	0/0:21,0:20:50.55:0,51,330	0/0:16,0:15:29.30:0,29,209	0/0:10,0:8:20.12:0,20,165	0/0:19,0:19:37.88:0,38,180	1/1:7,8:14:30.77:314,31,0	1/1:13,11:23:60.05:685,60,0	0/0:17,0:16:34.73:0,35,230	0/0:22,0:22:32.34:0,32,345	0/0:18,0:19:41.18:0,41,350	0/0:10,0:10:22.46:0,22,119
chr10	35471807	.	CA	C	763.56	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=0.759;DP=478;FS=4.015;HRun=9;HaplotypeScore=134.5670;InbreedingCoeff=0.9465;MQ=52.51;MQ0=14;MQRankSum=3.377;QD=14.14;ReadPosRankSum=2.248;VQSLOD=2.7950;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:57.02:0,57,597	0/0:11,0:11:33.04:0,33,354	0/0:26,0:10:13.61:0,14,210	0/0:21,0:7:11.66:0,12,96	0/0:16,0:15:30.59:0,31,295	0/0:16,0:13:31.13:0,31,297	0/0:13,0:13:38.42:0,38,395	0/0:19,0:19:37.74:0,38,430	0/0:16,0:16:39.02:0,39,406	0/0:21,0:20:54.58:0,55,589	0/0:15,0:15:42.10:0,42,333	1/1:10,11:21:44.07:327,44,0	0/0:9,0:9:26.96:0,27,272	0/0:9,0:9:12.02:0,12,114	0/0:17,0:17:20.66:0,21,200	0/0:20,0:20:30.56:0,31,343	0/0:22,0:20:30.08:0,30,337	0/0:18,0:18:45:0,45,469	0/0:17,0:17:45.13:0,45,509	0/0:14,0:14:34.34:0,34,374	0/0:10,0:8:15.04:0,15,169	0/0:15,0:15:25.79:0,26,201	1/1:5,7:11:11.21:153,11,0	1/1:9,12:21:50.43:423,50,0	0/0:15,0:14:32.61:0,33,300	0/0:22,0:22:55.21:0,55,532	0/0:20,0:19:41.24:0,41,426	0/0:11,0:11:20.65:0,21,216
chr10	35472131	.	A	AAAAT	6607.11	PASS	AB=0.836;AC=48;AF=0.889;AN=54;BaseQRankSum=-2.929;DP=314;FS=3.360;HRun=0;HaplotypeScore=50.9293;InbreedingCoeff=0.0018;MQ=58.85;MQ0=0;MQRankSum=2.844;QD=21.95;ReadPosRankSum=-0.447;VQSLOD=3.9378;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:8,6:14:8.84:270,0,9	1/1:2,0:6:6.02:105,6,0	./.	0/0:5,0:3:2.99:0,3,23	0/1:10,0:10:23.89:34,0,24	1/1:10,11:22:18.06:431,18,0	1/1:2,1:4:3.01:72,3,0	1/1:34,0:34:33.02:372,33,0	0/1:7,0:7:20.81:133,0,21	1/1:6,5:11:17.89:315,18,0	1/1:2,9:11:15.05:359,15,0	1/1:6,0:6:6.02:123,6,0	1/1:10,0:10:3:25,3,0	1/1:3,3:6:9.03:215,9,0	1/1:1,4:5:12.04:287,12,0	1/1:7,0:7:11.92:138,12,0	1/1:16,0:16:30.77:318,31,0	0/1:9,11:20:29.68:341,0,30	1/1:4,9:14:30.03:572,30,0	1/1:5,0:5:6.02:110,6,0	1/1:7,4:11:9.03:215,9,0	1/1:4,0:5:3.01:52,3,0	1/1:6,0:5:3.01:56,3,0	1/1:6,0:6:3.01:63,3,0	1/1:4,7:11:15.05:359,15,0	1/1:6,8:16:30.04:500,30,0	1/1:5,2:8:6.02:141,6,0	1/1:9,17:30:42.14:1000,42,0
chr10	35472687	.	C	CA	1675.17	PASS	AB=0.698;AC=38;AF=0.679;AN=56;BaseQRankSum=-0.283;DP=599;FS=0.724;HRun=16;HaplotypeScore=85.8737;InbreedingCoeff=-0.0619;MQ=67.10;MQ0=0;MQRankSum=-0.461;QD=3.13;ReadPosRankSum=-1.390;VQSLOD=0.0168;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:14,3:34:17.88:33,0,18	1/1:5,9:13:11.97:96,12,0	0/0:25,0:17:3.85:0,4,49	0/0:22,0:16:7.33:0,7,30	1/1:13,2:25:4.25:106,4,0	1/1:7,12:19:20.91:163,21,0	1/1:6,14:21:11.21:114,11,0	0/1:13,10:25:19.22:145,0,19	1/1:9,12:23:10.92:62,11,0	0/1:13,4:17:18.57:55,0,19	1/1:9,10:20:15.33:110,15,0	1/1:18,0:17:26.83:166,27,0	1/1:12,3:23:4.17:20,4,0	0/0:5,10:15:2.81:0,3,17	0/1:9,16:28:9.88:118,0,10	1/1:9,0:15:11.62:67,12,0	0/1:8,1:28:9.10:10,0,9	0/1:12,22:35:9.45:20,0,9	0/1:14,5:18:8.44:50,0,8	0/1:8,7:16:4.03:52,0,4	0/1:7,9:17:4.93:50,0,5	0/1:11,8:19:28.27:64,0,28	1/1:6,1:11:12.08:66,12,0	1/1:4,15:21:8.74:55,9,0	1/1:13,13:27:8.72:64,9,0	1/1:16,8:24:9.45:74,9,0	0/1:10,5:24:23.22:26,0,23	0/1:8,0:8:4.42:48,0,4
chr10	35473810	.	G	GGA	2351.35	PASS	AB=0.977;AC=36;AF=0.667;AN=54;BaseQRankSum=-4.821;DP=357;FS=9.974;HRun=0;HaplotypeScore=57.3393;InbreedingCoeff=0.1304;MQ=41.92;MQ0=32;MQRankSum=0.318;QD=9.52;ReadPosRankSum=0.248;VQSLOD=1.9091;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:12,0:12:2.96:45,3,0	1/1:7,0:6:9.03:133,9,0	0/0:26,0:3:2.88:0,3,15	0/0:43,0:9:6:0,6,57	0/1:15,0:15:14.20:14,0,31	1/1:13,1:13:15.05:227,15,0	1/1:14,1:13:7.67:85,8,0	1/1:15,0:14:13.53:131,14,0	0/1:11,0:11:12.51:61,0,13	1/1:9,1:9:18.92:210,19,0	0/1:11,0:10:13.42:63,0,13	0/0:9,0:9:2.96:0,3,78	1/1:10,1:10:6.02:94,6,0	1/1:3,7:10:3.01:47,3,0	1/1:6,8:13:3.01:47,3,0	1/1:6,0:5:11.51:105,12,0	0/1:10,0:9:14.36:14,0,31	0/1:9,0:6:0.20:125,0,0	1/1:11,0:7:8.92:82,9,0	1/1:7,1:8:5.49:71,5,0	./.	1/1:4,5:9:9.03:136,9,0	0/0:10,0:10:8.94:0,9,66	0/0:13,0:9:8.96:0,9,73	0/1:18,0:15:25.03:302,0,25	1/1:8,0:7:8.98:122,9,0	0/1:15,1:16:20.29:349,0,20	0/1:6,1:5:16.45:46,0,16
chr10	35473833	.	GAA	G	274.61	PASS	AB=0.906;AC=20;AF=0.357;AN=56;BaseQRankSum=1.877;DP=310;FS=2.446;HRun=3;HaplotypeScore=63.4150;InbreedingCoeff=0.0469;MQ=38.10;MQ0=31;MQRankSum=-2.469;QD=1.83;ReadPosRankSum=2.736;VQSLOD=-0.7374;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:13,0:12:2.78:3,0,6	1/1:5,1:5:2.04:23,2,0	0/0:16,0:1:3.01:0,3,55	0/0:29,0:2:4.26:0,4,60	0/1:16,0:16:2.25:2,0,64	0/1:6,2:8:15.67:16,0,31	0/1:10,0:7:4.85:5,0,29	0/0:20,0:17:30.94:0,31,249	0/1:11,0:11:12.89:36,0,13	1/1:9,0:8:4.10:89,4,0	0/0:7,1:7:8.20:0,8,63	0/1:5,0:5:23.56:24,0,77	0/0:7,2:8:9.54:0,10,41	0/1:13,0:13:13.19:30,0,13	0/0:12,0:11:5.44:0,5,25	1/1:7,0:6:5.81:52,6,0	0/0:15,0:13:15.98:0,16,84	0/1:8,1:6:2.59:21,0,3	0/0:9,0:8:12.32:0,12,109	0/1:2,0:6:14.08:14,0,25	0/0:7,0:6:9.79:0,10,46	1/1:7,0:7:7.99:43,8,0	0/0:9,0:9:8.99:0,9,76	0/0:10,0:6:8.31:0,8,49	0/0:10,6:14:21.70:0,22,153	0/1:8,0:7:26.33:37,0,26	0/1:11,4:14:22.63:23,0,142	0/1:5,0:5:0.07:14,0,0
chr10	35473837	.	GGA	G	291.68	PASS	AB=0.881;AC=12;AF=0.214;AN=56;BaseQRankSum=3.399;DP=278;FS=1.920;HRun=0;HaplotypeScore=58.6109;InbreedingCoeff=-0.0118;MQ=36.99;MQ0=27;MQRankSum=-1.574;QD=3.51;ReadPosRankSum=-0.635;VQSLOD=1.8432;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:5,7:11:6.47:11,0,6	0/0:4,0:3:3.48:0,3,37	0/0:16,0:1:3.01:0,3,54	0/0:29,0:2:4.57:0,5,65	0/1:13,1:14:51.12:51,0,118	0/0:8,0:8:16.16:0,16,133	0/0:9,0:6:13.83:0,14,72	0/0:19,0:16:42.04:0,42,571	1/1:6,3:9:0.80:82,1,0	0/1:4,1:4:13.19:45,0,13	0/0:4,1:5:5.68:0,6,41	0/0:5,0:5:11.42:0,11,93	0/0:5,1:5:8.79:0,9,65	0/1:9,2:11:44.63:45,0,79	0/0:10,0:9:8.70:0,9,56	1/1:1,4:5:5.91:62,6,0	0/0:14,0:12:2:0,2,179	0/0:7,0:5:0.63:0,1,74	0/0:10,0:9:24.41:0,24,333	0/1:7,0:7:24.78:25,0,28	0/0:7,0:6:11.71:0,12,80	0/1:5,0:5:7.28:7,0,9	0/0:9,0:9:8.99:0,9,94	0/0:10,0:6:9.47:0,9,96	0/0:12,1:13:30.85:0,31,296	0/1:6,2:7:61.71:62,0,77	0/0:12,2:13:1.72:0,2,322	0/1:7,0:5:6.11:41,0,6
chr10	35474493	.	ATGGGG	A	236.23	PASS	AC=4;AF=0.095;AN=42;BaseQRankSum=2.489;DP=209;FS=0.000;HRun=0;HaplotypeScore=42.1555;InbreedingCoeff=0.4457;MQ=86.79;MQ0=6;MQRankSum=-2.026;QD=11.81;ReadPosRankSum=0.824;VQSLOD=1.6752;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:24.07:0,24,623	0/0:2,0:2:3.01:0,3,85	./.	0/0:27,0:15:14.96:0,15,189	0/0:3,0:3:3.01:0,3,79	./.	0/0:7,0:7:3:0,3,26	0/0:7,0:7:3:0,3,27	0/0:8,0:8:21.07:0,21,578	./.	./.	1/1:9,4:13:15.05:280,15,0	0/0:3,0:3:6.02:0,6,171	0/0:7,0:7:18.06:0,18,503	0/0:5,0:5:9.03:0,9,258	0/0:10,0:10:9.03:0,9,241	0/0:14,0:14:27.07:0,27,663	0/0:10,0:10:15.05:0,15,352	./.	0/0:3,0:3:3.01:0,3,84	0/0:6,0:6:12.04:0,12,343	0/0:7,0:7:6.02:0,6,172	./.	1/1:5,2:7:3.01:56,3,0	0/0:10,0:10:18.04:0,18,448	0/0:6,0:6:12.04:0,12,343	0/0:7,0:7:12.03:0,12,270	./.
chr10	35475063	.	G	GA	9221.79	PASS	AB=1.000;AC=47;AF=0.839;AN=56;BaseQRankSum=-9.027;DP=454;FS=12.919;HRun=9;HaplotypeScore=42.4194;InbreedingCoeff=0.8486;MQ=70.19;MQ0=4;MQRankSum=0.297;QD=23.59;ReadPosRankSum=3.224;VQSLOD=4.5573;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,34:35:78.23:898,78,0	1/1:0,3:3:9.03:104,9,0	0/0:26,0:11:22.83:0,23,163	0/1:14,0:9:3.72:4,0,68	1/1:2,26:29:72.11:795,72,0	1/1:4,18:22:39.11:447,39,0	1/1:2,11:13:24.07:277,24,0	1/1:4,23:27:66.13:721,66,0	1/1:1,10:11:30.06:333,30,0	1/1:1,16:17:45.11:505,45,0	1/1:5,18:23:51.11:574,51,0	0/0:14,0:14:36.02:0,36,329	1/1:4,4:7:6.02:69,6,0	1/1:2,4:6:15.02:162,15,0	1/1:3,10:13:18.05:208,18,0	1/1:1,11:12:24.07:277,24,0	1/1:2,28:31:60.18:691,60,0	1/1:2,16:18:33.03:381,33,0	1/1:0,17:17:51.15:587,51,0	1/1:4,17:21:45.07:498,45,0	1/1:1,9:10:21.06:242,21,0	1/1:1,9:10:23.99:259,24,0	0/0:14,0:14:39.02:0,39,356	0/0:9,0:9:24.01:0,24,220	1/1:3,9:12:21.06:242,21,0	1/1:2,18:20:57.13:634,57,0	1/1:3,10:13:18.05:208,18,0	1/1:1,5:6:9.03:104,9,0
chr10	35475345	.	G	GA	619.02	PASS	AB=0.964;AC=4;AF=0.071;AN=56;BaseQRankSum=2.574;DP=559;FS=7.066;HRun=10;HaplotypeScore=60.2036;InbreedingCoeff=0.4357;MQ=56.83;MQ0=18;MQRankSum=-0.835;QD=8.48;ReadPosRankSum=0.807;VQSLOD=1.7022;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:11,31:41:48.01:711,48,0	0/0:11,0:10:14.91:0,15,119	0/0:22,0:8:13.73:0,14,153	0/1:18,0:5:9.67:10,0,42	0/0:26,0:26:62.71:0,63,516	0/0:11,0:11:29.97:0,30,246	0/0:27,0:27:64.94:0,65,523	0/0:33,0:29:71.57:0,72,590	0/0:10,0:11:3.98:0,4,114	0/0:19,0:18:44.93:0,45,369	0/0:16,1:17:9.96:0,10,287	0/0:24,0:24:44.86:0,45,368	0/0:12,0:12:23.93:0,24,194	0/0:14,0:13:26.94:0,27,221	0/0:13,0:13:29.94:0,30,245	0/0:16,0:16:35.95:0,36,295	0/0:40,0:39:98.84:0,99,811	0/0:24,1:24:15.86:0,16,327	0/0:18,0:17:41.94:0,42,344	0/0:20,0:18:41.93:0,42,342	0/0:17,0:17:41.95:0,42,345	0/1:12,1:13:1.18:1,0,188	0/0:16,0:16:38.94:0,39,320	0/0:22,0:21:46.97:0,47,375	0/0:12,0:11:23.95:0,24,197	0/0:32,0:31:47.53:0,48,571	0/0:19,1:20:15.87:0,16,330	0/0:7,0:7:5.97:0,6,49
chr10	35476746	.	CT	C	1848.97	PASS	AB=0.667;AC=30;AF=0.536;AN=56;BaseQRankSum=2.746;DP=533;FS=2.788;HRun=15;HaplotypeScore=69.1636;InbreedingCoeff=0.4579;MQ=73.41;MQ0=6;MQRankSum=-0.247;QD=5.96;ReadPosRankSum=2.210;VQSLOD=2.8644;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:30:56.30:0,56,478	0/1:1,7:8:2.64:111,0,3	0/0:20,0:14:4.97:0,5,49	0/0:17,0:15:5.67:0,6,25	0/0:26,0:30:47.98:0,48,426	1/1:9,9:18:5.62:136,6,0	0/1:13,4:17:11.55:45,0,12	1/1:15,14:30:16.77:220,17,0	0/0:16,1:17:16.25:0,16,148	1/1:4,5:9:8.65:54,9,0	1/1:5,7:14:21.71:127,22,0	0/0:5,0:12:8.64:0,9,48	1/1:7,6:15:3.38:107,3,0	1/1:4,7:11:8.75:57,9,0	0/1:7,11:19:21.25:128,0,21	0/0:18,1:20:8.06:0,8,201	0/0:27,1:31:49.38:0,49,532	1/1:7,14:22:17.21:165,17,0	0/1:16,6:22:33.86:113,0,34	1/1:9,10:20:22.49:140,22,0	1/1:5,14:20:31.50:198,32,0	1/1:9,6:15:11.37:69,11,0	0/0:11,0:20:18.22:0,18,101	0/0:9,0:24:8.56:0,9,44	0/1:8,5:16:34.19:34,0,37	1/1:8,5:14:5.79:38,6,0	0/1:9,14:25:24.27:178,0,24	1/1:2,5:10:22.56:125,23,0
chr10	35477241	.	A	AT	1230.57	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=4.741;DP=504;FS=0.571;HRun=9;HaplotypeScore=53.9753;InbreedingCoeff=0.8682;MQ=79.44;MQ0=0;MQRankSum=-4.542;QD=22.79;ReadPosRankSum=0.002;VQSLOD=4.1787;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:80.98:0,81,703	0/0:7,0:7:21:0,21,182	0/0:19,0:17:21.05:0,21,241	0/0:10,0:10:8.94:0,9,118	0/0:23,0:23:62.95:0,63,539	0/0:16,1:17:11.79:0,12,331	0/0:20,0:20:56.99:0,57,495	0/0:16,0:16:38.97:0,39,336	0/0:15,0:15:41.96:0,42,357	0/0:31,0:31:74.96:0,75,651	0/0:12,0:12:29.99:0,30,260	1/1:4,8:12:1.02:239,1,0	0/0:18,0:18:47.97:0,48,412	0/0:16,0:16:47.99:0,48,417	0/0:16,0:16:44.99:0,45,391	0/0:16,0:16:41.98:0,42,364	0/0:17,0:18:44.02:0,44,370	0/0:19,0:19:50.98:0,51,443	0/0:18,0:18:44.99:0,45,391	0/0:25,0:25:71.95:0,72,619	0/0:22,0:22:59.99:0,60,521	0/0:23,0:23:65.99:0,66,573	1/1:4,17:21:25.03:491,25,0	1/1:1,20:21:57.15:631,57,0	0/0:16,0:16:14.87:0,15,354	0/0:14,0:14:32.98:0,33,286	0/0:24,0:24:65.98:0,66,572	0/0:6,0:6:18:0,18,156
chr10	35478218	.	CAGAGACAGAGAGAG	C	692.66	PASS	AB=0.857;AC=5;AF=0.089;AN=56;BaseQRankSum=5.024;DP=505;FS=1.911;HRun=0;HaplotypeScore=193.6412;InbreedingCoeff=0.6631;MQ=68.36;MQ0=4;MQRankSum=-4.990;QD=18.72;ReadPosRankSum=1.130;VQSLOD=2.5868;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:60.04:0,60,2305	0/0:4,0:4:12.01:0,12,281	0/0:26,0:17:44.54:0,45,483	0/0:28,0:18:13.48:0,13,175	0/0:17,0:17:23.97:0,24,513	0/0:16,0:16:38.96:0,39,608	0/0:19,0:19:44.92:0,45,723	0/0:30,0:30:74.87:0,75,1057	0/0:23,0:21:30.48:0,30,647	0/0:27,0:27:71.75:0,72,1451	0/0:21,0:21:30.04:0,30,889	1/1:10,0:13:5.88:201,6,0	0/0:16,0:16:32.89:0,33,997	0/0:9,0:9:21.04:0,21,592	0/0:5,0:5:9:0,9,104	0/0:20,0:20:36.44:0,36,709	0/0:21,0:21:42.79:0,43,868	0/0:15,0:15:12.25:0,12,830	0/0:19,0:19:53.91:0,54,1615	0/0:18,0:18:44.99:0,45,1096	0/0:21,0:20:42.53:0,43,1123	0/0:12,0:12:24.52:0,25,634	1/1:0,10:12:12.43:388,12,0	0/1:10,0:12:22.50:219,0,22	0/0:13,0:13:27.02:0,27,598	0/0:26,0:26:69.64:0,70,1624	0/0:25,0:25:60.10:0,60,1831	0/0:14,0:14:39.05:0,39,1083
chr10	35478224	.	CAGAG	C	1264.81	PASS	AB=0.886;AC=25;AF=0.500;AN=50;BaseQRankSum=0.249;DP=515;FS=10.849;HRun=0;HaplotypeScore=106.7648;InbreedingCoeff=0.1338;MQ=65.31;MQ0=4;MQRankSum=-0.643;QD=4.45;ReadPosRankSum=1.873;VQSLOD=1.2943;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:38.09:0,38,561	1/1:3,1:4:3.01:46,3,0	./.	./.	0/0:17,0:17:6:0,6,76	0/1:14,1:17:5.91:169,0,6	0/1:15,4:19:11.59:83,0,12	0/0:24,0:24:0:0,0,0	0/0:24,0:22:6.02:0,6,127	0/1:25,0:26:6.41:64,0,6	1/1:16,6:22:6.02:93,6,0	1/1:13,0:13:9.01:86,9,0	1/1:8,4:12:9.03:139,9,0	0/1:10,0:10:23.63:56,0,24	./.	0/0:20,0:20:12.02:0,12,177	0/0:19,0:19:9.46:0,9,127	0/1:15,3:18:0.23:77,0,0	0/1:21,0:20:42.64:43,0,65	0/0:20,0:20:2.81:0,3,58	0/0:23,0:22:10.55:0,11,121	0/1:11,3:14:18.93:40,0,19	1/1:12,0:12:12.40:112,12,0	1/1:10,0:10:6.01:56,6,0	1/1:10,3:13:5.60:92,6,0	0/1:24,6:30:28.59:136,0,29	0/1:22,0:28:36.39:36,0,42	1/1:11,4:15:6.02:93,6,0
chr10	35478543	.	T	TA	3116.57	PASS	AB=0.895;AC=17;AF=0.304;AN=56;BaseQRankSum=-3.722;DP=591;FS=6.666;HRun=10;HaplotypeScore=68.3886;InbreedingCoeff=0.8610;MQ=70.63;MQ0=0;MQRankSum=-0.376;QD=15.13;ReadPosRankSum=1.765;VQSLOD=3.9175;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,32:39:87.22:927,87,0	0/0:9,0:10:26.01:0,26,203	0/0:13,0:13:4.09:0,4,146	0/0:7,0:7:8.82:0,9,58	1/1:4,21:25:23.44:442,23,0	0/0:22,0:22:53.90:0,54,443	0/0:21,0:21:53.92:0,54,443	0/0:24,0:25:64.94:0,65,521	1/1:4,21:25:51.13:544,51,0	0/0:35,0:35:83.84:0,84,684	0/0:22,2:25:0.99:0,1,410	1/1:3,0:16:31.25:157,31,0	0/0:17,0:17:41.94:0,42,345	0/0:22,0:22:59.91:0,60,492	0/0:24,0:24:65.92:0,66,542	1/1:4,21:25:32.50:551,32,0	1/1:3,9:12:27.07:288,27,0	0/0:16,0:16:41.94:0,42,345	0/0:19,0:19:53.93:0,54,442	0/0:24,0:24:21.21:0,21,384	0/0:23,1:25:29.98:0,30,442	0/0:16,0:17:28.96:0,29,227	1/1:6,1:27:37.06:191,37,0	1/1:3,0:20:42.61:213,43,0	0/0:20,0:20:50.93:0,51,419	0/1:15,2:17:6.54:7,0,294	0/0:23,2:26:32.98:0,33,467	0/0:16,0:16:26.89:0,27,221
chr10	35478790	.	CGTGTGTGTGTGT	C	1235.94	PASS	AB=1.000;AC=7;AF=0.130;AN=54;BaseQRankSum=5.471;DP=617;FS=0.989;HRun=0;HaplotypeScore=202.7352;InbreedingCoeff=0.6744;MQ=64.36;MQ0=4;MQRankSum=-4.255;QD=15.26;ReadPosRankSum=0.281;VQSLOD=2.4988;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:40:35.95:0,36,1293	0/0:9,0:9:3.01:0,3,75	0/0:28,0:23:17.61:0,18,277	0/0:27,0:19:6.02:0,6,135	0/0:16,0:16:3.46:0,3,25	0/0:27,0:26:23.66:0,24,716	0/0:28,0:27:30.41:0,30,1041	0/0:18,0:18:21.07:0,21,907	0/0:27,0:27:25.56:0,26,1046	0/0:27,0:27:54.14:0,54,2271	0/1:11,0:11:0:0,0,0	1/1:10,18:30:33.74:1066,34,0	0/0:22,0:20:12.46:0,12,320	0/0:21,0:18:12.85:0,13,450	0/0:14,0:22:11.80:0,12,366	0/0:20,0:19:17.73:0,18,818	0/0:26,0:25:28.58:0,29,655	0/0:19,0:18:30.05:0,30,1113	0/0:27,0:27:29.99:0,30,1075	0/0:18,0:16:15.02:0,15,404	0/0:37,0:36:20.14:0,20,803	0/0:15,0:15:0.89:0,1,2	1/1:8,7:15:8.63:117,9,0	1/1:15,9:25:6.02:177,6,0	0/0:24,0:23:2.84:0,3,51	0/0:21,0:21:36.59:0,37,1738	0/0:14,0:12:21.07:0,21,1058	./.
chr10	35479166	.	A	AC	1745.27	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=-9.035;DP=603;FS=0.528;HRun=7;HaplotypeScore=58.7372;InbreedingCoeff=0.8055;MQ=82.69;MQ0=0;MQRankSum=-1.153;QD=23.27;ReadPosRankSum=1.744;VQSLOD=3.8251;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:87.10:0,87,829	0/0:8,0:8:24.04:0,24,232	0/0:24,0:23:35.27:0,35,394	0/1:14,0:14:8.65:9,0,193	0/0:29,0:29:78.12:0,78,752	0/0:32,0:32:93.15:0,93,898	0/0:13,0:13:30.01:0,30,277	0/0:21,0:21:51.04:0,51,480	0/0:25,0:25:66.06:0,66,629	0/0:27,0:27:78.12:0,78,750	0/0:19,0:19:57.09:0,57,550	1/1:2,26:28:78.24:942,78,0	0/0:32,0:32:87.08:0,87,824	0/0:10,0:10:27.04:0,27,261	0/0:27,0:27:75.08:0,75,710	0/0:24,0:24:66.09:0,66,628	0/0:22,0:22:60.10:0,60,579	0/0:13,0:13:30.05:0,30,290	0/0:21,0:21:48.02:0,48,446	0/0:24,0:24:57.05:0,57,539	0/0:17,0:17:42.05:0,42,397	0/0:29,0:29:69.09:0,69,666	1/1:0,24:24:50.89:615,51,0	1/1:0,9:9:27.08:326,27,0	0/0:18,0:18:45.03:0,45,422	0/0:34,0:34:96.12:0,96,914	0/0:23,0:23:63.09:0,63,608	0/0:1,0:1:3:0,3,29
chr10	35479599	.	CT	C	573.23	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=6.320;DP=603;FS=4.668;HRun=12;HaplotypeScore=63.2657;InbreedingCoeff=0.8175;MQ=56.96;MQ0=16;MQRankSum=1.485;QD=10.42;ReadPosRankSum=0.841;VQSLOD=3.0460;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:50.66:0,51,656	0/0:9,1:11:3.63:0,4,193	0/0:10,1:1:2.60:0,3,10	0/0:12,0:4:8.97:0,9,78	0/0:43,2:44:78.84:0,79,948	0/0:25,2:26:16.65:0,17,532	0/0:16,0:15:35.84:0,36,333	0/0:41,1:33:33.86:0,34,518	0/0:15,0:15:20.66:0,21,176	0/0:17,1:17:27.05:0,27,274	0/0:23,1:25:39.66:0,40,547	1/1:3,16:18:8.41:248,8,0	0/0:17,1:18:15.84:0,16,342	0/0:11,0:12:21:0,21,202	0/0:28,0:28:33.01:0,33,485	0/0:22,0:21:48.04:0,48,465	0/0:28,0:28:63.10:0,63,627	0/0:15,0:14:32.86:0,33,298	0/0:24,1:20:20.17:0,20,414	0/0:24,0:23:68.26:0,68,640	0/0:9,0:9:12.02:0,12,122	0/0:14,2:16:12.83:0,13,312	1/1:9,19:28:20.31:341,20,0	1/1:0,8:8:14.94:117,15,0	0/0:25,0:25:56.95:0,57,563	0/0:34,0:33:70.21:0,70,748	0/0:24,0:23:33.87:0,34,518	0/0:13,0:13:33.07:0,33,335
chr10	35481276	.	T	TATCCTCTAGATGACTA	9397.09	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-6.760;DP=569;FS=3.458;HRun=0;HaplotypeScore=307.8835;InbreedingCoeff=0.9950;MQ=76.96;MQ0=0;MQRankSum=-9.789;QD=136.19;ReadPosRankSum=0.039;VQSLOD=4.3284;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:43:99:0,129,5624	0/0:10,0:10:21.06:0,21,864	0/0:12,0:12:33.08:0,33,1137	0/0:15,0:15:39.10:0,39,1375	0/0:15,0:15:45.15:0,45,1985	0/0:16,0:16:48.16:0,48,2168	0/0:24,0:24:69.24:0,69,2885	0/0:29,0:29:84.27:0,84,3334	0/0:19,0:19:54.17:0,54,2184	0/0:16,0:16:45.15:0,45,1961	0/0:17,0:17:48.14:0,48,1871	1/1:15,9:24:66.10:3989,66,0	0/0:18,0:18:54.19:0,54,2422	0/0:15,0:15:45.14:0,45,1896	0/0:20,0:20:60.21:0,60,2560	0/0:14,0:14:39.13:0,39,1673	0/0:23,0:23:69.22:0,69,2897	0/0:10,0:10:30.10:0,30,1222	0/0:24,0:24:66.23:0,66,2643	0/0:20,0:20:60.21:0,60,2767	0/0:39,0:39:99:0,114,4994	0/0:19,0:19:54.19:0,54,2134	1/1:17,12:29:60.60:4001,61,0	1/1:12,4:16:27.01:1407,27,0	0/0:24,0:24:69.24:0,69,3078	0/0:24,0:24:69.23:0,69,3029	0/0:27,0:27:72.23:0,72,2953	0/0:6,0:6:18.06:0,18,852
chr10	35481367	.	A	AC	1593.12	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=7.178;DP=449;FS=1.237;HRun=5;HaplotypeScore=67.6197;InbreedingCoeff=0.9361;MQ=74.45;MQ0=1;MQRankSum=-2.456;QD=26.55;ReadPosRankSum=1.902;VQSLOD=3.4347;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:51.13:0,51,548	0/0:2,0:2:6.02:0,6,64	0/0:14,0:12:21.97:0,22,208	0/0:11,0:10:17.98:0,18,183	0/0:12,0:12:33.08:0,33,353	0/0:11,0:11:30.08:0,30,322	0/0:18,0:18:45.09:0,45,475	0/0:17,0:17:36.08:0,36,387	0/0:17,0:17:48.12:0,48,515	0/0:17,0:17:42.10:0,42,446	0/0:8,0:8:24.05:0,24,249	1/1:0,21:21:54.18:710,54,0	0/0:12,0:12:27.05:0,27,281	0/0:18,0:18:42.07:0,42,439	0/0:17,0:17:48.12:0,48,516	0/0:15,0:15:42.08:0,42,442	0/0:33,0:33:96.18:0,96,1004	0/0:11,0:11:33.08:0,33,355	0/0:7,0:7:18.05:0,18,193	0/0:14,0:14:27.06:0,27,290	0/0:43,0:43:99:0,111,1192	0/0:21,0:21:51.12:0,51,546	1/1:1,15:16:33.11:433,33,0	1/1:3,20:23:45.14:592,45,0	0/0:13,0:13:36.09:0,36,387	0/0:17,0:17:48.11:0,48,507	0/0:16,0:16:42.10:0,42,451	0/0:3,0:3:9.02:0,9,97
chr10	35485561	.	CAA	C	4117.45	PASS	AB=0.625;AC=51;AF=0.911;AN=56;BaseQRankSum=-3.399;DP=523;FS=6.185;HRun=16;HaplotypeScore=76.5323;InbreedingCoeff=0.4009;MQ=54.31;MQ0=22;MQRankSum=-1.531;QD=8.20;ReadPosRankSum=4.905;VQSLOD=0.9514;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:10,1:39:63.45:288,63,0	1/1:3,3:7:0.94:28,1,0	0/0:8,0:3:5.47:0,5,30	0/0:12,0:9:11.88:0,12,129	1/1:10,10:22:29.05:223,29,0	1/1:7,16:26:36.84:344,37,0	1/1:7,10:16:26.31:240,26,0	1/1:15,7:24:17.36:178,17,0	1/1:2,6:9:11.69:87,12,0	1/1:15,8:24:17.43:192,17,0	1/1:3,6:10:20.66:162,21,0	1/1:8,0:19:24.38:104,24,0	0/1:8,11:19:34.74:167,0,35	1/1:7,9:15:17.75:150,18,0	1/1:13,9:20:28.87:215,29,0	1/1:8,8:17:8.72:117,9,0	1/1:22,8:28:4.36:163,4,0	1/1:10,11:23:28.70:252,29,0	1/1:8,10:20:26.10:198,26,0	1/1:7,7:14:8.81:75,9,0	1/1:5,8:14:8.88:159,9,0	1/1:7,4:13:2.85:67,3,0	1/1:7,0:14:7.86:35,8,0	1/1:10,1:29:38.03:162,38,0	1/1:8,8:17:6.68:152,7,0	1/1:6,9:18:20.10:203,20,0	1/1:8,5:13:1.68:107,2,0	1/1:4,2:4:5.97:50,6,0
chr10	35486657	.	GGC	G	1561.88	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=11.601;DP=721;FS=0.529;HRun=0;HaplotypeScore=101.9000;InbreedingCoeff=0.9995;MQ=82.73;MQ0=0;MQRankSum=-1.325;QD=23.66;ReadPosRankSum=3.479;VQSLOD=4.4189;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:48.16:0,48,952	0/0:11,0:11:33.11:0,33,670	0/0:21,0:21:60.21:0,60,1204	0/0:35,0:35:95.09:0,95,1865	0/0:30,0:30:90.30:0,90,1778	0/0:27,0:26:81.28:0,81,1629	0/0:24,0:24:72.25:0,72,1463	0/0:44,0:44:99:0,132,2539	0/0:36,0:36:99:0,108,2179	0/0:46,0:46:99:0,135,2645	0/0:23,0:23:66.21:0,66,1251	1/1:1,27:28:81.12:880,81,0	0/0:29,0:29:87.30:0,87,1731	0/0:18,0:18:54.19:0,54,1081	0/0:34,0:34:99:0,102,1986	0/0:25,0:25:75.26:0,75,1502	0/0:20,0:20:60.19:0,60,1149	0/0:14,0:14:42.14:0,42,837	0/0:14,0:14:42.14:0,42,853	0/0:23,0:23:66.23:0,66,1312	0/0:56,0:56:99:0,160,3158	0/0:22,0:22:66.22:0,66,1298	1/1:4,15:19:30.04:329,30,0	1/1:0,19:19:42.13:496,42,0	0/0:14,0:14:36.12:0,36,703	0/0:33,0:33:99:0,99,1908	0/0:26,0:26:78.27:0,78,1560	0/0:12,0:12:30.10:0,30,610
chr10	35486660	.	TAC	T	1589.42	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=11.549;DP=705;FS=1.767;HRun=0;HaplotypeScore=99.9076;InbreedingCoeff=0.9993;MQ=83.27;MQ0=0;MQRankSum=-3.103;QD=23.72;ReadPosRankSum=2.964;VQSLOD=4.3959;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:45.13:0,45,843	0/0:11,0:11:33.10:0,33,623	0/0:20,0:20:57.20:0,57,1140	0/0:34,0:34:99:0,102,1929	0/0:29,0:29:84.15:0,84,1409	0/0:27,0:26:81.17:0,81,1389	0/0:24,0:24:72.25:0,72,1448	0/0:41,0:41:99:0,123,2458	0/0:36,0:36:99:0,108,2192	0/0:45,0:45:99:0,132,2572	0/0:22,0:22:63.14:0,63,1071	1/1:1,27:28:81.12:880,81,0	0/0:29,0:29:87.28:0,87,1673	0/0:19,0:19:57.17:0,57,1119	0/0:33,0:33:99:0,99,1987	0/0:23,0:23:69.24:0,69,1389	0/0:19,0:19:57.20:0,57,1155	0/0:14,0:14:39.13:0,39,792	0/0:15,0:15:45.15:0,45,913	0/0:22,0:22:63.14:0,63,1098	0/0:53,0:53:99:0,156,3056	0/0:21,0:21:60.18:0,60,1132	1/1:2,16:18:27.08:308,27,0	1/1:2,19:21:48.11:544,48,0	0/0:14,0:14:36.08:0,36,623	0/0:31,0:31:93.27:0,93,1672	0/0:26,0:26:78.27:0,78,1564	0/0:12,0:12:30.09:0,30,572
chr10	35487248	.	GA	G	4454.87	PASS	AB=0.681;AC=40;AF=0.714;AN=56;BaseQRankSum=-5.314;DP=424;FS=11.690;HRun=11;HaplotypeScore=76.7927;InbreedingCoeff=0.7264;MQ=64.56;MQ0=11;MQRankSum=-4.242;QD=16.87;ReadPosRankSum=0.379;VQSLOD=4.9724;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:38:78.09:0,78,792	1/1:6,9:14:29.61:242,30,0	0/0:22,0:12:17.05:0,17,179	0/0:15,1:7:12.46:0,12,103	0/0:26,0:26:48.98:0,49,495	1/1:1,11:12:32.94:271,33,0	1/1:5,7:12:23.96:196,24,0	1/1:4,6:11:25.94:192,26,0	0/0:10,0:10:18.02:0,18,178	1/1:5,8:13:29.92:239,30,0	1/1:0,10:11:32:252,32,0	1/1:0,10:10:23.97:197,24,0	1/1:4,8:12:26.90:215,27,0	1/1:4,5:9:17.92:142,18,0	1/1:5,8:13:26.81:206,27,0	0/0:9,0:9:0.90:0,1,143	0/0:36,1:38:70.47:0,70,915	1/1:8,8:16:4.35:224,4,0	1/1:9,11:16:0.95:212,1,0	1/1:7,14:20:47.90:390,48,0	0/1:8,5:13:24.90:120,0,25	1/1:3,5:8:17.91:140,18,0	1/1:1,9:10:23.97:197,24,0	1/1:1,16:17:47.93:394,48,0	1/1:0,8:8:23.97:197,24,0	0/1:7,9:15:5.73:141,0,6	1/1:6,6:11:20.88:165,21,0	1/1:0,5:5:14.98:123,15,0
chr10	35487268	.	T	TAA	7222.82	PASS	AB=0.889;AC=47;AF=0.839;AN=56;BaseQRankSum=-3.419;DP=467;FS=1.844;HRun=11;HaplotypeScore=92.1395;InbreedingCoeff=0.8278;MQ=72.93;MQ0=2;MQRankSum=-2.941;QD=18.57;ReadPosRankSum=-0.920;VQSLOD=3.9748;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,1:41:70.90:305,71,0	1/1:4,5:9:11.92:228,12,0	0/0:25,0:18:23.26:0,23,174	0/0:22,0:14:17.64:0,18,144	1/1:9,0:24:37.41:130,37,0	1/1:3,10:14:27.08:366,27,0	1/1:2,5:10:11.44:253,11,0	1/1:3,12:18:46.59:548,47,0	1/1:0,0:7:15.32:51,15,0	1/1:7,16:24:51.16:700,51,0	1/1:6,8:14:24.07:320,24,0	0/0:10,0:11:20.76:0,21,186	1/1:3,7:11:17.55:226,18,0	1/1:3,4:7:12.04:173,12,0	1/1:5,10:15:24.08:345,24,0	1/1:1,1:10:22.97:112,23,0	1/1:11,0:39:27.94:237,28,0	1/1:13,7:21:41.49:495,41,0	1/1:5,12:21:44.94:592,45,0	1/1:6,10:16:39.04:494,39,0	1/1:4,4:9:21.39:238,21,0	1/1:2,7:10:18.06:256,18,0	0/1:14,0:16:13.56:14,0,252	0/0:19,0:19:48.06:0,48,465	1/1:5,3:9:20.54:237,21,0	1/1:6,15:23:49.09:578,49,0	1/1:3,7:12:20.49:224,20,0	1/1:4,1:6:11.51:105,12,0
chr10	35487394	.	T	TAAA	1513.64	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-3.922;DP=519;FS=0.000;HRun=9;HaplotypeScore=73.2018;InbreedingCoeff=0.9459;MQ=68.97;MQ0=0;MQRankSum=-0.390;QD=38.81;ReadPosRankSum=1.438;VQSLOD=3.3916;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,126,1559	0/0:5,0:5:15.05:0,15,190	0/0:14,0:14:13.03:0,13,185	0/0:7,0:7:7.30:0,7,111	0/0:19,0:19:41.55:0,42,528	0/0:17,0:17:45.09:0,45,554	0/0:26,0:26:72.20:0,72,910	0/0:26,0:26:60.13:0,60,735	0/0:15,0:15:42.09:0,42,516	0/0:13,0:13:30.06:0,30,369	0/0:7,0:7:15.01:0,15,189	1/1:2,13:16:30.10:592,30,0	0/0:21,0:22:55.72:0,56,717	0/0:15,0:15:33.09:0,33,417	0/0:18,0:18:45.10:0,45,555	0/0:13,0:13:30.04:0,30,351	0/0:56,0:56:99:0,153,1903	0/0:25,0:25:67.71:0,68,851	0/0:19,0:18:39.07:0,39,482	0/0:13,0:13:39.11:0,39,479	0/0:34,0:35:76.72:0,77,982	0/0:8,0:8:18.04:0,18,227	1/1:2,7:9:21.07:413,21,0	1/1:1,13:14:33.11:651,33,0	0/0:12,0:12:30.08:0,30,374	0/0:22,0:22:39.03:0,39,493	0/0:16,0:16:45.12:0,45,554	0/0:11,0:11:21.05:0,21,265
chr10	35492672	.	A	ACACACATG	4976.63	PASS	AB=0.679;AC=9;AF=0.161;AN=56;BaseQRankSum=-0.995;DP=701;FS=2.824;HRun=0;HaplotypeScore=192.7290;InbreedingCoeff=0.9467;MQ=66.48;MQ0=1;MQRankSum=-9.750;QD=41.13;ReadPosRankSum=-1.476;VQSLOD=4.2040;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:16,16:37:24.08:998,24,0	0/0:9,0:9:15.02:0,15,300	0/0:36,0:29:35.83:0,36,617	0/0:32,0:26:32.95:0,33,825	0/1:10,8:19:0:0,0,0	0/0:17,0:17:45.15:0,45,1159	0/0:31,0:30:45.53:0,46,1159	0/0:28,0:28:36.10:0,36,700	1/1:6,16:24:48.16:1965,48,0	0/0:25,0:25:57.19:0,57,1412	0/0:13,0:13:30.08:0,30,666	0/0:29,0:29:63.22:0,63,1524	0/0:25,0:25:30.10:0,30,739	0/0:26,0:26:45.15:0,45,1127	0/0:26,0:26:51.17:0,51,1254	1/1:5,14:20:27:1123,27,0	1/1:11,9:21:20.32:891,20,0	0/0:21,0:21:37.07:0,37,841	0/0:12,0:12:21.06:0,21,461	0/0:26,0:26:60.18:0,60,1439	0/0:42,0:42:42.56:0,43,1133	0/0:30,0:30:66.04:0,66,1496	0/0:21,0:21:42.13:0,42,979	0/0:47,0:47:65.27:0,65,2224	0/0:18,0:18:36.12:0,36,891	0/0:39,0:39:84.28:0,84,2077	0/0:18,0:18:48.16:0,48,1171	0/0:9,0:9:24.08:0,24,586
chr10	35492733	.	GAC	G	702.80	PASS	AB=1.000;AC=12;AF=0.231;AN=52;BaseQRankSum=-1.923;DP=669;FS=16.707;HRun=0;HaplotypeScore=167.8983;InbreedingCoeff=0.3024;MQ=46.63;MQ0=35;MQRankSum=1.794;QD=2.75;ReadPosRankSum=3.376;VQSLOD=1.8587;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:31,0:29:1.37:1,0,89	0/0:6,0:6:5.98:0,6,47	./.	./.	0/0:13,0:13:11.83:0,12,88	0/0:20,0:19:20.90:0,21,179	0/1:47,0:44:18.78:19,0,137	0/0:47,0:45:29.57:0,30,164	0/1:28,0:28:3.63:4,0,166	0/0:27,0:26:17.42:0,17,264	0/0:17,0:17:5.95:0,6,49	1/1:17,12:28:12.44:190,12,0	0/0:23,0:21:8.96:0,9,68	0/1:18,0:17:2.57:3,0,29	0/0:26,0:26:8.45:0,8,84	0/0:17,0:16:15.02:0,15,171	0/0:15,0:15:1.80:0,2,94	0/1:14,0:9:0.52:1,0,40	0/0:21,0:18:10.86:0,11,128	0/1:13,0:13:0.03:0,0,0	0/0:43,0:40:14.43:0,14,141	0/0:23,0:23:1.97:0,2,29	1/1:11,0:10:2.84:14,3,0	1/1:31,32:61:8.26:597,8,0	0/0:19,0:18:16.75:0,17,152	0/0:29,0:28:7.83:0,8,184	0/0:23,0:21:13.18:0,13,106	0/0:9,0:9:4.25:0,4,36
chr10	35492735	.	C	CAG	3138.34	PASS	AB=0.961;AC=26;AF=0.481;AN=54;BaseQRankSum=0.033;DP=678;FS=27.624;HRun=0;HaplotypeScore=167.6380;InbreedingCoeff=-0.4363;MQ=45.52;MQ0=38;MQRankSum=0.601;QD=5.21;ReadPosRankSum=2.647;VQSLOD=1.6965;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:32,0:30:5.17:5,0,56	0/1:6,0:6:15.03:15,0,38	0/0:14,0:1:2.98:0,3,21	./.	0/0:13,0:13:8.54:0,9,62	0/1:19,0:18:48.14:48,0,120	0/1:49,0:46:99:332,0,106	0/1:47,0:45:87.51:246,0,88	0/1:26,0:26:1.12:1,0,118	0/1:26,1:26:59.25:423,0,59	0/1:17,0:17:19.07:159,0,19	0/1:31,0:29:7.20:7,0,316	0/1:8,16:23:30.16:30,0,37	0/1:18,0:17:10.52:181,0,11	1/1:26,0:26:2.07:257,2,0	0/0:17,0:16:11.56:0,12,92	0/1:16,0:15:4.72:5,0,98	0/1:14,0:9:29.27:69,0,29	0/1:21,0:18:16.22:188,0,16	1/1:14,0:14:23.73:188,24,0	0/1:24,21:44:23.43:23,0,132	1/1:23,0:23:13.46:291,13,0	0/0:12,0:11:17.85:0,18,147	0/1:63,1:61:46.78:47,0,506	0/1:19,0:18:79.04:164,0,79	0/1:28,0:26:25.96:320,0,26	0/1:24,0:22:52.25:191,0,52	0/1:9,0:9:1.80:101,0,2
chr10	35493021	.	CT	C	6068.68	PASS	AB=0.941;AC=37;AF=0.661;AN=56;BaseQRankSum=5.086;DP=470;FS=4.689;HRun=10;HaplotypeScore=59.0747;InbreedingCoeff=0.9182;MQ=68.04;MQ0=0;MQRankSum=-1.570;QD=19.90;ReadPosRankSum=1.092;VQSLOD=5.8515;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,1:38:75.13:0,75,1020	1/1:0,5:5:15:130,15,0	0/1:15,1:15:12:12,0,168	0/0:17,0:12:23.51:0,24,185	0/0:13,0:13:21.94:0,22,234	1/1:2,11:13:35.98:310,36,0	1/1:3,16:19:50.97:438,51,0	1/1:4,15:19:14.78:354,15,0	0/0:22,0:22:55.03:0,55,599	1/1:3,18:20:47.99:417,48,0	1/1:0,11:11:23.99:208,24,0	0/0:13,0:13:36.08:0,36,388	1/1:4,17:21:41.20:344,41,0	1/1:1,15:16:29.99:260,30,0	1/1:2,9:11:26.98:234,27,0	0/0:14,0:14:39.09:0,39,421	0/0:21,0:21:57.13:0,57,612	1/1:5,26:31:74.96:651,75,0	1/1:5,14:19:44.98:391,45,0	1/1:1,12:13:35.99:312,36,0	1/1:0,15:15:35.98:313,36,0	1/1:3,9:12:29.98:260,30,0	0/0:10,0:10:24.06:0,24,258	0/0:17,0:17:45.11:0,45,487	1/1:1,12:13:26.99:234,27,0	1/1:1,18:19:53.95:464,54,0	1/1:3,15:18:50.35:423,50,0	1/1:1,12:13:35.99:312,36,0
chr10	35493226	.	CTCTTTCTTTCCTTCTTTCTT	C	10215.13	PASS	AB=0.938;AC=31;AF=0.554;AN=56;BaseQRankSum=-10.246;DP=489;FS=0.000;HRun=0;HaplotypeScore=309.9674;InbreedingCoeff=-0.5396;MQ=55.81;MQ0=7;MQRankSum=2.998;QD=22.70;ReadPosRankSum=8.677;VQSLOD=1.8181;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:29:99:154,0,461	0/1:7,0:7:99:312,0,117	0/0:19,0:12:29.94:0,30,446	0/0:20,0:13:23.57:0,24,353	0/1:9,0:9:7.10:7,0,18	0/1:24,0:24:99:861,0,352	1/1:22,0:22:50.96:940,51,0	1/1:12,10:22:48.12:707,48,0	0/1:21,0:21:42.49:42,0,574	0/1:22,0:21:59.04:1045,0,59	0/1:8,4:12:99:126,0,138	0/1:11,0:11:99:111,0,235	1/1:10,0:10:30.06:489,30,0	0/1:10,5:15:99:314,0,234	0/1:14,9:23:99:284,0,488	0/1:22,0:22:60.48:60,0,508	0/1:22,0:22:25.62:26,0,245	1/1:14,1:15:8.84:417,9,0	0/1:15,8:23:99:709,0,195	0/1:11,0:11:99:133,0,230	1/1:11,0:11:0.58:306,1,0	0/1:15,0:15:99:334,0,171	0/1:12,0:12:42.31:72,0,42	0/1:19,0:19:99:522,0,148	0/1:16,0:16:99:282,0,228	0/1:13,7:20:99:681,0,119	0/1:23,0:23:61.87:1005,0,62	0/1:14,0:13:39.71:275,0,40
chr10	35493233	.	TTTCC	T	7745.56	PASS	AB=0.864;AC=50;AF=0.893;AN=56;BaseQRankSum=1.318;DP=459;FS=95.536;HRun=0;HaplotypeScore=178.6511;InbreedingCoeff=0.5649;MQ=51.96;MQ0=7;MQRankSum=-3.145;QD=18.35;ReadPosRankSum=-0.352;VQSLOD=1.0017;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:27:2.13:334,2,0	1/1:7,0:7:20.84:162,21,0	0/0:19,0:12:29.92:0,30,266	0/0:18,0:11:26.48:0,26,224	0/1:5,3:8:0.98:92,0,1	0/1:24,0:24:90.37:192,0,90	1/1:18,0:18:1.10:262,1,0	1/1:19,0:19:44.88:373,45,0	1/1:20,0:20:37.22:373,37,0	1/1:21,0:20:47.30:360,47,0	1/1:11,0:11:17.98:184,18,0	1/1:8,5:13:32.84:409,33,0	1/1:11,0:11:29.92:254,30,0	1/1:14,0:14:26.83:245,27,0	1/1:22,0:22:40.95:397,41,0	1/1:23,0:23:35.61:318,36,0	1/1:20,1:21:27.32:233,27,0	1/1:13,0:13:13.38:194,13,0	1/1:21,0:21:26.95:451,27,0	1/1:10,0:10:26.93:279,27,0	1/1:9,0:9:20.64:135,21,0	1/1:15,0:15:26.94:263,27,0	1/1:1,8:9:14.97:242,15,0	1/1:14,3:17:41.73:429,42,0	1/1:12,0:12:32.86:309,33,0	1/1:20,0:20:35.78:425,36,0	1/1:23,0:23:64.81:513,65,0	1/1:14,0:13:38.84:318,39,0
chr10	35493250	.	T	TCC	577.57	PASS	AB=0.976;AC=16;AF=0.286;AN=56;BaseQRankSum=-5.162;DP=450;FS=13.904;HRun=0;HaplotypeScore=190.8820;InbreedingCoeff=-0.2677;MQ=35.57;MQ0=14;MQRankSum=5.234;QD=2.56;ReadPosRankSum=-1.416;VQSLOD=1.7604;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:46.60:0,47,766	0/1:7,0:7:12:22,0,12	0/0:14,0:5:12.04:0,12,189	0/0:19,0:5:14.91:0,15,182	0/0:9,0:9:15.05:0,15,203	0/1:23,1:24:45.82:46,0,107	0/1:21,0:19:60.34:98,0,60	0/1:13,0:13:88.91:148,0,89	0/0:24,0:24:35.59:0,36,416	0/1:24,1:24:58.73:213,0,59	0/0:9,0:9:7.36:0,7,22	0/0:15,0:15:18.79:0,19,143	0/1:7,0:7:12.95:13,0,17	0/0:20,0:20:27.58:0,28,230	0/0:24,0:24:13.33:0,13,129	0/0:22,0:22:33.11:0,33,451	0/0:22,0:22:15.18:0,15,282	0/0:10,0:10:5.39:0,5,96	0/1:19,0:18:95.21:95,0,109	0/1:11,0:11:1.73:2,0,54	0/1:6,2:8:23.95:24,0,89	0/1:13,0:13:17.96:18,0,58	1/1:6,0:6:1.88:2,2,0	0/1:17,1:18:2.70:3,0,117	0/0:12,0:12:10.71:0,11,87	0/1:23,0:23:15.54:16,0,203	0/1:24,0:24:9.92:10,0,207	0/1:7,0:7:15.28:15,0,43
chr10	35493267	.	TCTTCCTCC	T	11276.74	PASS	AB=0.907;AC=40;AF=0.714;AN=56;BaseQRankSum=0.722;DP=450;FS=10.440;HRun=0;HaplotypeScore=188.6877;InbreedingCoeff=0.1105;MQ=36.26;MQ0=13;MQRankSum=1.170;QD=27.98;ReadPosRankSum=1.362;VQSLOD=3.7290;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:20:28.14:503,28,0	1/1:4,0:4:12.04:181,12,0	0/0:9,0:2:5.05:0,5,84	0/0:17,0:2:5.75:0,6,90	1/1:1,9:10:9.03:178,9,0	0/1:23,0:23:13.52:739,0,14	0/1:14,0:12:99:305,0,114	0/1:25,0:25:99:406,0,362	1/1:2,20:22:33.11:841,33,0	0/1:6,10:15:23.79:523,0,24	1/1:11,0:11:18.05:259,18,0	0/1:22,0:22:5.11:5,0,394	1/1:9,0:9:24.01:374,24,0	1/1:17,0:17:6.11:588,6,0	1/1:29,0:29:66.20:1040,66,0	1/1:2,20:22:27.09:687,27,0	0/1:5,17:22:29.83:364,0,30	0/1:12,0:12:32.77:444,0,33	0/1:24,0:23:99:597,0,120	1/1:6,4:10:21.06:254,21,0	0/1:7,0:8:91.62:187,0,92	1/1:8,6:14:18.05:219,18,0	0/1:6,0:6:4.34:4,0,104	0/0:21,0:21:24.65:0,25,436	1/1:12,0:12:36.11:524,36,0	1/1:25,0:25:57.11:835,57,0	1/1:19,0:19:57.17:929,57,0	1/1:7,0:6:18.06:291,18,0
chr10	35493275	.	C	CCTTT	1777.85	PASS	AB=0.938;AC=26;AF=0.464;AN=56;BaseQRankSum=-8.438;DP=439;FS=3.292;HRun=0;HaplotypeScore=185.3110;InbreedingCoeff=0.0020;MQ=36.51;MQ0=11;MQRankSum=0.277;QD=5.59;ReadPosRankSum=-5.895;VQSLOD=0.1957;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:16,0:16:0.44:115,0,0	0/0:4,0:4:3.33:0,3,12	0/0:9,0:3:6.02:0,6,91	0/0:16,0:3:6.02:0,6,78	0/0:9,0:9:3.37:0,3,27	0/1:21,0:21:46.30:51,0,46	1/1:13,0:11:11.58:109,12,0	1/1:24,0:24:24.32:229,24,0	0/0:22,0:22:24.35:0,24,168	0/1:15,0:14:4.24:71,0,4	0/1:12,0:12:21.03:41,0,21	0/1:8,15:23:64.17:571,0,64	0/0:8,0:8:1.11:0,1,3	0/1:17,0:17:11.42:11,0,25	0/1:29,0:29:24.53:25,0,55	0/0:21,0:21:20.97:0,21,171	0/0:22,0:22:11.98:0,12,99	1/1:12,0:12:3.12:27,3,0	0/1:21,0:20:20.33:101,0,20	0/0:10,0:10:9.70:0,10,42	1/1:7,0:7:2.37:8,2,0	0/1:12,0:12:11.17:11,0,23	1/1:6,1:7:9.03:180,9,0	0/1:11,13:24:72.95:134,0,73	0/1:12,0:12:30.05:31,0,30	0/1:27,0:27:3.80:100,0,4	1/1:19,0:19:0.66:75,1,0	1/1:7,0:6:2.94:49,3,0
chr10	35493405	.	CAG	C	1232.84	PASS	AB=0.800;AC=37;AF=0.771;AN=48;BaseQRankSum=1.040;DP=519;FS=11.397;HRun=0;HaplotypeScore=91.2341;InbreedingCoeff=0.1746;MQ=44.25;MQ0=21;MQRankSum=-1.596;QD=3.63;ReadPosRankSum=3.402;VQSLOD=1.3163;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:23,1:23:28.99:29,0,103	1/1:3,3:6:9.02:99,9,0	./.	./.	1/1:15,0:18:8.42:46,8,0	1/1:14,7:23:11.69:94,12,0	1/1:12,3:14:12.02:124,12,0	1/1:11,0:10:2.68:11,3,0	1/1:10,0:14:5.68:28,6,0	1/1:19,1:19:11.67:81,12,0	./.	0/0:12,0:11:3.01:0,3,35	1/1:3,3:6:3.01:33,3,0	0/1:8,1:11:34.96:35,0,53	1/1:11,7:17:5.91:66,6,0	1/1:16,0:18:8.52:42,9,0	1/1:16,0:22:3.35:34,3,0	1/1:15,2:17:9.01:95,9,0	1/1:6,2:7:6.02:66,6,0	0/1:13,0:12:8.52:16,0,9	0/1:11,9:20:14.06:54,0,14	1/1:12,0:12:3:27,3,0	0/0:19,0:20:5.91:0,6,120	0/0:21,0:21:30.05:0,30,345	0/1:8,6:16:3.26:138,0,3	1/1:14,6:21:17.88:177,18,0	1/1:12,4:16:8.86:80,9,0	./.
chr10	35494638	.	TTTG	T	1431.12	PASS	AB=0.997;AC=31;AF=0.554;AN=56;BaseQRankSum=1.080;DP=439;FS=20.179;HRun=0;HaplotypeScore=84.9725;InbreedingCoeff=-0.0055;MQ=40.51;MQ0=26;MQRankSum=-2.377;QD=4.63;ReadPosRankSum=-3.521;VQSLOD=-0.3958;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:14,2:14:13.46:133,13,0	1/1:8,0:7:11.38:69,11,0	0/0:31,0:8:13.82:0,14,120	0/0:52,0:5:4.01:0,4,44	0/1:34,0:27:99:114,0,101	1/1:18,1:19:3.77:63,4,0	0/1:14,0:13:30.72:61,0,31	0/1:23,1:20:24.88:191,0,25	0/1:7,0:7:15.64:18,0,16	1/1:25,0:21:30.34:201,30,0	0/1:15,0:15:30.55:54,0,31	0/0:11,0:11:13.26:0,13,399	0/1:6,0:6:9.38:27,0,9	0/1:12,0:10:20.36:60,0,20	1/1:12,0:12:10.97:110,11,0	0/0:11,0:10:4.99:0,5,114	0/1:16,0:15:20.85:61,0,21	1/1:6,0:6:0.69:69,1,0	0/1:10,0:7:12.10:46,0,12	0/1:8,0:8:4.64:5,0,33	1/1:3,0:2:0.74:1,1,0	0/1:7,0:7:3.48:34,0,3	0/0:16,0:15:36.11:0,36,667	0/0:9,0:9:17.99:0,18,267	1/1:17,0:13:5.06:37,5,0	1/1:19,0:18:14.66:172,15,0	0/1:19,0:15:11.62:43,0,12	0/1:12,0:11:3.43:31,0,3
chr10	35494639	.	TTG	T	3050.46	PASS	AB=0.982;AC=39;AF=0.696;AN=56;BaseQRankSum=1.026;DP=435;FS=21.558;HRun=0;HaplotypeScore=73.5450;InbreedingCoeff=0.4110;MQ=40.07;MQ0=28;MQRankSum=-2.477;QD=10.00;ReadPosRankSum=-1.987;VQSLOD=1.2345;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,10:14:15.01:163,15,0	1/1:7,1:7:11.91:108,12,0	0/0:30,0:8:13.71:0,14,100	0/0:50,0:4:3.53:0,4,61	0/1:33,1:27:13.74:224,0,14	1/1:18,0:18:23.84:227,24,0	1/1:14,0:13:6.70:127,7,0	1/1:22,0:18:13.79:265,14,0	0/1:7,0:7:1.95:50,0,2	1/1:25,0:21:55.55:365,56,0	0/1:14,1:15:19.52:145,0,20	0/0:11,0:11:12.72:0,13,309	0/1:6,0:6:3.35:33,0,3	1/1:12,0:10:4.26:84,4,0	1/1:11,0:11:24.97:200,25,0	0/0:13,0:10:2.34:0,2,55	0/1:16,0:15:9.93:85,0,10	1/1:6,0:6:3.21:71,3,0	1/1:8,2:7:1.09:125,1,0	1/1:8,0:8:3.28:72,3,0	1/1:3,0:2:2.45:16,2,0	1/1:7,0:7:14.33:116,14,0	0/0:16,0:14:36.09:0,36,524	0/0:9,0:9:17.17:0,17,199	1/1:17,0:13:16.74:98,17,0	1/1:17,2:18:39.37:373,39,0	1/1:17,1:14:11.29:140,11,0	1/1:11,1:11:18.71:136,19,0
chr10	35494640	.	TG	T	4908.19	PASS	AB=0.842;AC=45;AF=0.804;AN=56;BaseQRankSum=2.315;DP=434;FS=6.665;HRun=1;HaplotypeScore=64.5431;InbreedingCoeff=0.7167;MQ=39.81;MQ0=29;MQRankSum=-2.030;QD=15.48;ReadPosRankSum=0.345;VQSLOD=4.3409;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:13:14.69:105,15,0	1/1:7,1:7:11.98:106,12,0	0/0:30,1:8:11.12:0,11,56	0/0:46,3:4:3.51:0,4,51	1/1:31,3:27:46.64:356,47,0	1/1:16,2:18:33.35:326,33,0	1/1:12,2:13:26.40:266,26,0	1/1:8,14:18:40.23:437,40,0	1/1:6,1:7:7.83:68,8,0	1/1:21,4:21:58.98:604,59,0	0/1:13,3:16:8.04:226,0,8	0/0:11,0:11:8.51:0,9,210	1/1:5,0:6:5.85:43,6,0	1/1:11,2:10:17.42:149,17,0	1/1:9,2:11:28.34:263,28,0	1/1:13,0:10:10.28:76,10,0	1/1:15,1:15:20.92:140,21,0	1/1:5,1:6:13.45:87,13,0	1/1:5,4:6:13.31:152,13,0	1/1:1,7:8:16.24:180,16,0	1/1:3,0:2:2.57:41,3,0	1/1:4,3:7:17.99:178,18,0	0/0:17,0:15:35.95:0,36,391	0/0:9,0:9:8.71:0,9,133	1/1:7,8:11:17.61:177,18,0	1/1:13,6:18:49.77:484,50,0	1/1:16,2:14:22.10:221,22,0	1/1:11,1:11:20.99:223,21,0
chr10	35496649	.	AC	A	1829.15	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.131;DP=626;FS=0.000;HRun=1;HaplotypeScore=59.9787;InbreedingCoeff=0.9991;MQ=89.69;MQ0=0;MQRankSum=-2.733;QD=38.11;ReadPosRankSum=0.982;VQSLOD=4.0623;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,117,1790	0/0:14,0:14:42.14:0,42,671	0/0:27,0:27:81.27:0,81,1268	0/0:20,0:20:53.41:0,53,743	0/0:35,0:35:99:0,102,1606	0/0:23,0:23:69.24:0,69,1103	0/0:28,0:28:84.29:0,84,1343	0/0:32,0:32:96.31:0,96,1489	0/0:27,0:27:81.28:0,81,1295	0/0:30,0:30:87.30:0,87,1385	0/0:18,0:18:54.18:0,54,863	1/1:0,16:16:45.15:629,45,0	0/0:20,0:20:60.20:0,60,957	0/0:23,0:23:69.24:0,69,1099	0/0:23,0:23:69.20:0,69,1052	0/0:29,0:29:87.30:0,87,1391	0/0:19,0:19:57.18:0,57,885	0/0:8,0:8:24.05:0,24,357	0/0:17,0:17:51.17:0,51,816	0/0:26,0:26:72.25:0,72,1150	0/0:32,0:32:96.29:0,96,1485	0/0:18,0:18:54.18:0,54,860	1/1:0,15:15:45.15:629,45,0	1/1:0,17:17:51.17:713,51,0	0/0:20,0:20:60.20:0,60,956	0/0:21,0:21:63.21:0,63,1008	0/0:19,0:19:57.19:0,57,911	0/0:10,0:10:30.10:0,30,475
chr10	35496924	.	A	AT	9010	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-13.037;DP=480;FS=0.817;HRun=7;HaplotypeScore=43.3520;InbreedingCoeff=0.9842;MQ=78.50;MQ0=1;MQRankSum=-2.007;QD=30.13;ReadPosRankSum=-0.450;VQSLOD=4.7256;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:69.10:0,69,666	1/1:1,15:16:39.12:471,39,0	0/0:17,0:14:11.85:0,12,194	0/0:15,0:14:25.43:0,25,225	0/0:28,0:28:78.13:0,78,753	1/1:0,16:16:48.15:578,48,0	1/1:0,12:12:30.09:362,30,0	1/1:2,30:32:90.19:1042,90,0	0/0:11,0:12:26.07:0,26,238	1/1:2,14:16:42.12:496,42,0	1/1:1,16:17:48.06:560,48,0	0/0:11,0:11:24.02:0,24,226	1/1:1,9:10:24.07:290,24,0	1/1:1,8:9:18.06:217,18,0	1/1:0,23:23:57.17:689,57,0	0/0:18,0:18:42.06:0,42,406	0/0:23,0:23:63.08:0,63,601	1/1:2,19:20:51.16:616,51,0	1/1:2,13:15:13.15:441,13,0	1/1:1,13:14:39.12:471,39,0	1/1:2,12:14:30.09:362,30,0	1/1:3,5:8:15.05:179,15,0	0/0:18,0:18:45.03:0,45,419	0/0:9,0:9:24.04:0,24,232	1/1:0,15:15:45.14:544,45,0	1/1:5,22:27:66.19:785,66,0	1/1:1,22:23:60.18:725,60,0	1/1:3,8:11:15.05:181,15,0
chr10	35497258	.	CGTGTGTGTGTGTGTGTGT	C	6023.34	PASS	AB=0.943;AC=31;AF=0.554;AN=56;BaseQRankSum=4.275;DP=543;FS=26.416;HRun=0;HaplotypeScore=247.4019;InbreedingCoeff=0.5264;MQ=60.73;MQ0=15;MQRankSum=-3.639;QD=20.08;ReadPosRankSum=0.004;VQSLOD=2.4886;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:28:49.39:0,49,2576	1/1:6,1:6:9.03:265,9,0	0/0:35,0:21:6.02:0,6,199	0/0:39,0:27:9.03:0,9,223	0/0:18,0:19:26.91:0,27,1650	1/1:8,3:11:9.03:426,9,0	0/1:13,0:13:91.81:92,0,208	0/1:33,0:32:99:122,0,106	0/0:17,0:17:27.09:0,27,1236	1/1:19,2:21:9.02:320,9,0	1/1:12,4:17:18.06:646,18,0	0/0:11,0:11:18.06:0,18,1304	1/1:16,3:19:15.03:550,15,0	1/1:10,3:13:12:363,12,0	1/1:19,6:25:26.99:853,27,0	0/0:27,0:28:45.14:0,45,3260	0/0:23,0:21:33.09:0,33,2122	0/1:15,0:15:10.43:10,0,237	1/1:16,1:15:6.01:173,6,0	0/1:14,5:19:3.89:508,0,4	0/1:22,1:22:99:131,0,181	1/1:10,1:11:3.01:140,3,0	0/0:18,0:18:12.04:0,12,786	0/0:25,0:24:24.45:0,24,1234	1/1:11,5:16:21.06:712,21,0	1/1:10,5:15:6.01:204,6,0	1/1:15,2:16:12.01:365,12,0	1/1:6,1:7:3.01:145,3,0
chr10	35498668	.	CA	C	1893.67	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.028;DP=649;FS=0.508;HRun=5;HaplotypeScore=64.0430;InbreedingCoeff=0.9993;MQ=64.86;MQ0=0;MQRankSum=-0.599;QD=29.13;ReadPosRankSum=2.409;VQSLOD=4.2006;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,108,1554	0/0:12,0:12:36.12:0,36,514	0/0:29,0:25:67.45:0,67,917	0/0:20,0:19:54.06:0,54,702	0/0:21,0:21:63.21:0,63,900	0/0:23,0:23:69.23:0,69,979	0/0:16,0:16:48.16:0,48,679	0/0:24,0:24:63.20:0,63,887	0/0:22,0:22:66.22:0,66,950	0/0:33,0:33:96.31:0,96,1340	0/0:25,0:25:72.23:0,72,1017	1/1:0,19:19:51.16:632,51,0	0/0:22,0:22:63.21:0,63,906	0/0:18,0:18:54.16:0,54,740	0/0:29,0:29:84.27:0,84,1190	0/0:23,0:23:69.23:0,69,994	0/0:22,0:22:59.50:0,60,901	0/0:18,0:17:51.17:0,51,728	0/0:26,0:26:69.23:0,69,992	0/0:27,0:27:78.26:0,78,1122	0/0:14,0:14:36.12:0,36,517	0/0:31,0:31:93.31:0,93,1334	1/1:0,18:18:48.15:592,48,0	1/1:1,27:28:29.02:812,29,0	0/0:31,0:31:90.30:0,90,1296	0/0:22,0:22:60.20:0,60,864	0/0:29,0:28:87.29:0,87,1248	0/0:9,0:9:27.09:0,27,387
chr10	35499180	.	GAC	G	2736.38	PASS	AB=0.756;AC=39;AF=0.750;AN=52;BaseQRankSum=-1.983;DP=569;FS=1.091;HRun=0;HaplotypeScore=101.2126;InbreedingCoeff=0.4913;MQ=65.20;MQ0=6;MQRankSum=0.642;QD=6.72;ReadPosRankSum=1.206;VQSLOD=3.0828;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:40:5.99:0,6,49	1/1:7,0:10:14.54:106,15,0	./.	./.	0/0:14,0:17:6.37:0,6,42	1/1:11,3:14:14.24:130,14,0	1/1:17,8:28:29.17:251,29,0	1/1:24,0:22:8.81:79,9,0	0/0:18,0:16:6:0,6,52	1/1:13,9:21:24.04:251,24,0	0/1:12,0:16:30.60:66,0,31	1/1:8,0:19:25.57:126,26,0	1/1:10,5:15:5.81:66,6,0	1/1:7,8:17:17.71:161,18,0	1/1:13,11:25:26.60:259,27,0	0/0:8,0:13:2.99:0,3,26	0/0:18,0:26:12.89:0,13,98	1/1:6,10:17:17.88:179,18,0	1/1:10,0:11:5.85:46,6,0	1/1:10,5:18:17.55:141,18,0	0/1:24,4:32:16.14:192,0,16	1/1:13,10:24:14.33:146,14,0	1/1:11,0:15:16.46:82,16,0	1/1:15,0:29:8.56:43,9,0	1/1:11,8:20:17.83:179,18,0	1/1:13,7:20:12:121,12,0	0/1:12,10:24:19.34:176,0,19	1/1:0,6:6:9.02:99,9,0
chr10	35500845	.	C	CTAACATTTCCCCTGAAGAAG	119309.79	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-5.577;DP=644;FS=1.507;HRun=0;HaplotypeScore=283.6522;InbreedingCoeff=0.9866;MQ=69.49;MQ0=0;MQRankSum=-9.221;QD=196.23;ReadPosRankSum=5.696;VQSLOD=4.5552;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:17,9:28:63.22:5482,63,0	1/1:7,0:7:18.03:1152,18,0	0/0:18,0:18:45.13:0,45,1841	0/0:18,0:18:45.12:0,45,1789	1/1:15,6:25:63.21:3701,63,0	1/1:15,6:26:63.22:4400,63,0	1/1:14,8:24:66.23:4859,66,0	1/1:39,0:38:99:6279,108,0	1/1:10,4:17:42.14:3494,42,0	1/1:20,11:35:99:6874,102,0	1/1:18,10:29:78.27:6134,78,0	1/1:9,7:17:48.16:3274,48,0	1/1:13,4:18:45.15:3945,45,0	1/1:17,4:24:57.20:4506,57,0	1/1:26,6:33:81.28:5980,81,0	1/1:13,7:20:60.21:4980,60,0	1/1:15,4:19:51.17:4054,51,0	1/1:12,4:16:45.15:3990,45,0	1/1:10,2:13:39.12:2263,39,0	1/1:12,10:23:66.22:4248,66,0	1/1:10,0:10:18.06:931,18,0	1/1:8,10:22:51.17:3988,51,0	1/1:15,9:28:69.24:5181,69,0	1/1:9,2:11:24.08:1991,24,0	1/1:28,14:45:99:10559,120,0	1/1:27,6:33:90.31:7299,90,0	1/1:26,8:38:99:8206,102,0	1/1:3,2:6:18.06:1540,18,0
chr10	35501115	.	T	TGGG	2493.30	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-6.018;DP=675;FS=0.561;HRun=8;HaplotypeScore=103.5181;InbreedingCoeff=0.9970;MQ=85.69;MQ0=0;MQRankSum=-1.057;QD=20.78;ReadPosRankSum=-1.135;VQSLOD=0.9831;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:16,14:33:30.10:562,30,0	0/0:12,0:12:30.09:0,30,394	0/0:29,0:29:64.65:0,65,784	0/0:21,0:21:36.04:0,36,407	1/1:4,13:19:20.92:386,21,0	0/0:22,0:22:66.21:0,66,867	0/0:20,0:20:48.11:0,48,611	0/0:18,0:18:39.10:0,39,512	1/1:8,10:21:24.06:447,24,0	0/0:27,0:27:66.18:0,66,852	0/0:22,0:23:47.15:0,47,677	0/0:24,0:24:57.14:0,57,749	0/0:15,0:15:42.13:0,42,548	0/0:24,0:24:66.20:0,66,867	0/0:36,0:36:96.28:0,96,1247	1/1:4,14:20:21.07:424,21,0	1/1:9,17:27:42.14:848,42,0	0/0:27,0:27:57.14:0,57,731	0/0:15,0:15:39.08:0,39,495	0/0:26,0:26:57.12:0,57,726	0/0:46,0:47:99:0,125,1633	0/0:24,0:24:63.18:0,63,828	0/0:25,0:25:60.15:0,60,787	0/0:32,0:32:90.26:0,90,1167	0/0:17,0:17:45.12:0,45,591	0/0:27,0:27:75.24:0,75,986	0/0:30,0:30:78.22:0,78,1024	0/0:14,0:14:27.08:0,27,355
chr10	35501762	.	CG	C	2306.89	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.624;DP=584;FS=6.587;HRun=1;HaplotypeScore=60.2386;InbreedingCoeff=0.9984;MQ=89.88;MQ0=0;MQRankSum=-2.326;QD=33.43;ReadPosRankSum=2.339;VQSLOD=3.1816;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,105,1583	0/0:13,0:13:39.10:0,39,582	0/0:24,0:24:65.18:0,65,988	0/0:23,0:23:66.13:0,66,899	0/0:24,0:24:69.14:0,69,1000	0/0:21,0:21:63.15:0,63,933	0/0:20,0:20:60.17:0,60,888	0/0:22,0:22:63.16:0,63,929	0/0:17,0:17:51.17:0,51,791	0/0:30,0:30:90.29:0,90,1350	0/0:15,0:15:42.12:0,42,613	1/1:0,17:17:45.15:629,45,0	0/0:18,0:18:48.16:0,48,749	0/0:20,0:20:60.19:0,60,897	0/0:20,0:20:60.17:0,60,891	0/0:13,0:13:36.07:0,36,513	0/0:27,0:27:75.26:0,75,1169	0/0:13,0:13:39.10:0,39,582	0/0:21,1:22:21.24:0,21,829	0/0:12,0:12:33.11:0,33,510	0/0:32,0:32:93.29:0,93,1427	0/0:21,0:21:63.18:0,63,947	1/1:0,25:25:62.93:879,63,0	1/1:0,27:27:69.20:943,69,0	0/0:24,0:24:72.23:0,72,1097	0/0:22,0:22:66.12:0,66,976	0/0:13,0:12:39.13:0,39,606	0/0:14,0:14:42.06:0,42,609
chr10	35503191	.	GAGAAAGAGTCAGGCCCTTTAAGTT	G	3181.20	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=6.846;DP=533;FS=8.136;HRun=0;HaplotypeScore=317.1006;InbreedingCoeff=0.9121;MQ=78.84;MQ0=0;MQRankSum=-6.967;QD=83.72;ReadPosRankSum=1.873;VQSLOD=2.1287;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,129,11322	0/0:8,0:8:24.08:0,24,2466	0/0:13,0:13:39.13:0,39,2469	0/0:30,0:30:82.48:0,82,4039	0/0:19,0:19:54.19:0,54,5179	0/0:22,0:22:66.23:0,66,6619	0/0:19,0:19:57.18:0,57,5031	0/0:32,0:32:87.30:0,87,6778	0/0:20,0:20:57.20:0,57,5652	0/0:15,0:15:42.14:0,42,3030	0/0:22,0:22:63.22:0,63,5534	1/1:2,14:16:27.09:1781,27,0	0/0:16,0:16:48.15:0,48,4385	0/0:22,0:22:60.21:0,60,5038	0/0:10,0:10:30.10:0,30,3377	0/0:11,0:11:33.11:0,33,2717	0/0:31,0:31:93.32:0,93,9678	0/0:15,0:15:45.15:0,45,3903	0/0:16,0:16:42.14:0,42,3045	0/0:20,0:20:54.17:0,54,4876	0/0:24,0:24:66.23:0,66,6392	0/0:18,0:18:54.17:0,54,4787	1/1:0,11:11:24.55:1334,25,0	1/1:1,10:11:3.01:198,3,0	0/0:20,0:20:60.18:0,60,5233	0/0:21,0:21:60.21:0,60,5887	0/0:24,0:24:69.24:0,69,6293	0/0:3,0:3:9.03:0,9,778
chr10	35503851	.	G	GTTT	1906.82	PASS	AB=0.715;AC=15;AF=0.268;AN=56;BaseQRankSum=4.162;DP=527;FS=2.639;HRun=12;HaplotypeScore=98.7635;InbreedingCoeff=0.7115;MQ=73.33;MQ0=9;MQRankSum=-0.419;QD=12.30;ReadPosRankSum=2.246;VQSLOD=1.6828;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:10,0:22:27.08:370,27,0	0/0:7,0:8:14.35:0,14,165	0/0:40,0:18:8.85:0,9,167	0/0:24,0:10:2.02:0,2,8	1/1:6,8:16:25.28:381,25,0	0/0:19,0:21:38.95:0,39,460	0/0:21,0:22:53.79:0,54,559	0/0:40,0:42:83.57:0,84,855	1/1:3,8:13:24.06:380,24,0	0/0:22,0:22:38.79:0,39,414	0/0:15,0:15:39.07:0,39,425	0/1:2,0:13:6.12:6,0,23	0/0:6,0:6:17.79:0,18,179	0/1:6,0:7:3.55:4,0,127	0/0:14,0:15:30.96:0,31,313	1/1:2,7:12:17.80:264,18,0	1/1:8,25:33:32.90:564,33,0	0/0:12,0:12:23.94:0,24,251	0/0:35,0:36:23.13:0,23,782	0/0:16,0:16:33.92:0,34,371	0/0:7,0:9:7.40:0,7,94	0/0:9,0:9:23.93:0,24,244	1/1:2,1:13:18.62:107,19,0	0/1:9,0:25:18.88:19,0,75	0/0:22,0:23:45.11:0,45,466	0/0:18,0:19:31.09:0,31,379	0/0:19,0:20:44.79:0,45,478	0/0:10,0:11:22.50:0,23,255
chr10	35504763	.	GA	G	7263.95	PASS	AB=0.633;AC=37;AF=0.661;AN=56;BaseQRankSum=3.680;DP=605;FS=17.237;HRun=11;HaplotypeScore=64.5135;InbreedingCoeff=0.9166;MQ=65.21;MQ0=8;MQRankSum=0.215;QD=17.42;ReadPosRankSum=1.940;VQSLOD=4.2086;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,31:38:52.92:635,53,0	1/1:1,8:10:26:203,26,0	0/0:28,1:17:14.29:0,14,265	0/0:17,0:10:20.75:0,21,168	0/0:25,1:26:48.04:0,48,682	1/1:3,15:18:35.94:296,36,0	1/1:3,10:13:23.96:197,24,0	1/1:13,26:42:60.48:653,60,0	0/0:12,0:12:33.08:0,33,351	1/1:1,20:21:53.90:439,54,0	1/1:0,18:18:50.93:418,51,0	0/0:14,0:17:26.89:0,27,262	1/1:5,12:18:37.98:299,38,0	1/1:6,12:18:37.76:300,38,0	1/1:1,24:25:56.93:467,57,0	0/0:16,0:17:32.24:0,32,378	0/0:34,0:34:84.21:0,84,892	1/1:6,17:21:17.18:339,17,0	1/1:9,13:22:37.87:291,38,0	1/1:3,13:16:40.99:326,41,0	1/1:1,14:16:43.98:350,44,0	0/1:8,11:19:2.04:192,0,2	0/0:19,0:19:54.14:0,54,576	0/0:15,1:15:11.44:0,11,322	1/1:4,20:24:47.95:394,48,0	1/1:2,31:33:86.85:711,87,0	1/1:4,23:27:62.91:517,63,0	1/1:3,11:14:3.97:239,4,0
chr10	35505275	.	C	CGG	2348.78	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-5.487;DP=591;FS=3.384;HRun=6;HaplotypeScore=83.0328;InbreedingCoeff=0.9938;MQ=77.24;MQ0=2;MQRankSum=-0.132;QD=32.62;ReadPosRankSum=-0.004;VQSLOD=3.5010;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:90.11:0,90,1043	0/0:13,0:13:39.12:0,39,475	0/0:15,0:15:39.12:0,39,470	0/0:16,0:16:45.12:0,45,526	0/0:26,0:26:66.20:0,66,803	0/0:22,0:22:54.15:0,54,644	0/0:21,0:21:53.98:0,54,594	0/0:23,0:23:51.15:0,51,620	0/0:15,0:15:39.12:0,39,470	0/0:21,0:21:48.14:0,48,583	0/0:19,0:19:45.12:0,45,536	1/1:7,14:21:54.08:821,54,0	0/0:14,0:14:33.08:0,33,387	0/0:16,0:16:36.10:0,36,438	0/0:16,0:16:38.94:0,39,421	0/0:20,0:20:54.05:0,54,622	0/0:33,0:33:78.23:0,78,937	0/0:31,0:31:90.26:0,90,1083	0/0:16,0:16:39.11:0,39,475	0/0:22,0:22:48.13:0,48,583	0/0:31,0:31:81.17:0,81,945	0/0:14,0:14:33.09:0,33,402	1/1:4,15:19:39.13:658,39,0	1/1:3,29:30:60.21:1013,60,0	0/0:19,0:19:45.12:0,45,548	0/0:17,0:17:33.08:0,33,392	0/0:26,0:26:60.18:0,60,730	0/0:10,0:10:15.01:0,15,165
chr10	35505652	.	TTTCTTTTTCTTC	T	5506.35	PASS	AB=1.000;AC=31;AF=0.554;AN=56;BaseQRankSum=-2.354;DP=605;FS=5.001;HRun=0;HaplotypeScore=214.7006;InbreedingCoeff=-0.5090;MQ=64.69;MQ0=2;MQRankSum=-0.881;QD=9.58;ReadPosRankSum=1.232;VQSLOD=3.3626;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:4,29:33:11.95:203,12,0	0/1:13,0:13:51.76:52,0,945	0/0:14,0:9:17.56:0,18,129	0/0:16,0:8:10.96:0,11,90	1/1:3,23:26:56.51:559,57,0	0/1:19,0:19:94.87:95,0,1023	0/1:15,0:15:99:157,0,719	0/1:28,0:28:99:300,0,106	1/1:3,15:18:18.06:633,18,0	0/1:27,0:27:99:328,0,986	0/1:21,0:21:81.83:82,0,1681	0/1:20,0:20:99:121,0,983	0/1:16,0:16:94.85:95,0,1112	0/1:16,0:16:99:117,0,1250	0/1:25,0:25:99:148,0,2008	1/1:5,21:26:24.01:744,24,0	1/1:9,27:35:15.94:528,16,0	0/1:21,0:21:99:111,0,1181	0/1:31,0:30:99:222,0,1270	0/1:18,0:18:21.82:22,0,1802	0/1:10,0:10:25.10:25,0,510	0/1:8,0:8:12.96:13,0,402	0/1:15,0:15:5.75:6,0,1223	0/1:29,0:29:99:194,0,1682	0/1:33,0:33:99:190,0,2595	0/1:22,0:22:99:175,0,1063	0/1:34,0:33:99:275,0,2217	0/1:15,0:15:99:115,0,893
chr10	35505658	.	TTTCTTC	T	5839.74	PASS	AB=0.984;AC=32;AF=0.571;AN=56;BaseQRankSum=-5.845;DP=591;FS=4.830;HRun=0;HaplotypeScore=144.8377;InbreedingCoeff=-0.4719;MQ=63.17;MQ0=4;MQRankSum=-0.473;QD=10.39;ReadPosRankSum=-3.479;VQSLOD=2.3018;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:32,0:32:11.91:108,12,0	0/1:11,0:11:56.53:57,0,385	0/0:13,0:7:17.58:0,18,130	0/0:16,0:8:10.91:0,11,88	1/1:24,0:24:56.51:441,57,0	0/1:17,0:17:99:145,0,403	0/1:15,0:15:99:189,0,248	1/1:10,20:30:80.19:593,80,0	1/1:15,0:15:18.06:278,18,0	0/1:25,0:25:99:410,0,330	0/1:22,0:22:99:190,0,656	0/1:17,0:17:99:227,0,377	0/1:16,0:16:99:124,0,392	0/1:17,0:17:99:142,0,478	0/1:26,0:26:99:256,0,790	1/1:24,0:24:23.94:328,24,0	1/1:33,0:32:18.02:250,18,0	0/1:21,0:21:99:179,0,431	0/1:31,0:29:99:276,0,479	0/1:20,0:20:99:101,0,712	0/1:8,0:8:51.01:51,0,206	0/1:6,0:6:37.95:38,0,164	0/1:17,0:17:82.58:83,0,482	0/1:33,0:33:99:392,0,614	0/1:32,0:32:99:222,0,1005	0/1:11,10:21:99:251,0,306	0/1:33,0:32:99:325,0,923	0/1:16,0:16:99:186,0,292
chr10	35505806	.	CT	C	895.27	PASS	AB=0.867;AC=10;AF=0.179;AN=56;BaseQRankSum=5.734;DP=524;FS=1.622;HRun=12;HaplotypeScore=62.2302;InbreedingCoeff=0.4773;MQ=73.67;MQ0=1;MQRankSum=1.156;QD=8.14;ReadPosRankSum=2.678;VQSLOD=2.5224;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,2:38:53.44:0,53,839	0/0:11,0:11:24.05:0,24,243	0/0:13,1:12:5.73:0,6,102	0/1:12,1:12:20.98:21,0,62	0/0:22,0:24:47.35:0,47,424	0/0:19,1:21:27.62:0,28,410	0/0:8,0:10:26.84:0,27,240	0/0:32,1:33:39.84:0,40,571	0/0:14,0:14:33:0,33,307	0/0:17,0:17:31.28:0,31,293	0/0:20,0:21:56.82:0,57,517	1/1:3,10:13:32.80:250,33,0	0/0:13,0:13:38.96:0,39,365	0/0:15,0:15:36.03:0,36,344	0/0:18,2:20:7.59:0,8,418	0/0:17,1:20:27.70:0,28,448	0/0:32,1:33:63.83:0,64,792	0/1:10,3:13:16.37:16,0,213	0/0:19,1:21:15.66:0,16,321	0/0:19,0:23:56.78:0,57,509	0/1:15,2:17:21.83:22,0,279	0/0:13,0:13:27.05:0,27,269	1/1:7,19:27:49.64:377,50,0	1/1:0,16:17:46.87:354,47,0	0/0:18,0:18:48.02:0,48,453	0/0:9,1:11:9.65:0,10,257	0/0:20,1:24:30.70:0,31,472	0/1:7,2:10:16.58:17,0,198
chr10	35511909	.	C	CG	21131.09	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-11.705;DP=814;FS=0.000;HRun=5;HaplotypeScore=77.3516;InbreedingCoeff=0.9861;MQ=79.22;MQ0=0;MQRankSum=-4.467;QD=31.31;ReadPosRankSum=4.278;VQSLOD=5.2519;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,45:53:99:1460,111,0	1/1:1,11:12:27.08:343,27,0	0/0:25,0:25:69.11:0,69,718	0/0:23,0:23:51.07:0,51,520	1/1:0,24:24:63.18:789,63,0	1/1:1,24:25:69.22:908,69,0	1/1:1,27:28:57.19:750,57,0	1/1:7,34:41:99:1207,99,0	1/1:3,38:41:87.28:1143,87,0	1/1:3,27:30:78.07:951,78,0	1/1:2,23:25:57.18:730,57,0	0/0:41,0:41:99:0,117,1243	1/1:0,28:28:72.22:944,72,0	1/1:4,16:20:39.12:504,39,0	1/1:2,44:46:99:1650,126,0	1/1:1,29:30:78.25:1026,78,0	1/1:0,34:34:99:1303,99,0	1/1:3,26:29:27.95:718,28,0	1/1:4,12:16:36.05:438,36,0	1/1:4,26:30:69.09:832,69,0	1/1:7,32:39:99:1334,108,0	1/1:6,29:35:77.98:910,78,0	0/0:18,0:18:44.91:0,45,450	0/0:32,0:32:78.11:0,78,806	1/1:0,21:21:57.19:749,57,0	1/1:2,32:34:93.26:1182,93,0	1/1:1,29:30:87.28:1145,87,0	1/1:1,3:4:9.03:118,9,0
chr10	35685041	.	C	CGTGGGTAAGGAGGACTTGAAATGC	27818.38	PASS	AB=0.822;AC=51;AF=0.944;AN=54;BaseQRankSum=-4.060;DP=211;FS=15.546;HRun=0;HaplotypeScore=224.7697;InbreedingCoeff=-0.0921;MQ=76.41;MQ0=0;MQRankSum=-1.229;QD=131.84;ReadPosRankSum=0.398;VQSLOD=3.3737;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:11:15.01:1271,15,0	1/1:5,0:5:12.04:766,12,0	0/1:7,1:9:24.36:1406,0,24	0/1:7,0:7:10.50:1159,0,11	1/1:6,0:6:15.05:1119,15,0	1/1:8,0:8:15.05:1191,15,0	1/1:3,0:3:6.02:531,6,0	1/1:13,0:13:36.09:2523,36,0	1/1:4,0:4:12.04:822,12,0	1/1:5,0:5:15.01:1074,15,0	1/1:9,0:9:15.01:1250,15,0	1/1:11,0:11:13.69:1057,14,0	1/1:11,0:11:6.90:1895,7,0	1/1:4,0:4:6:359,6,0	1/1:18,0:18:36.11:2145,36,0	1/1:10,0:9:21.07:1290,21,0	1/1:8,0:8:23.82:809,24,0	1/1:7,0:7:6.02:444,6,0	1/1:4,0:4:1.70:360,2,0	1/1:7,0:7:15.04:941,15,0	1/1:4,0:4:6.02:152,6,0	1/1:4,0:4:12.03:532,12,0	0/1:11,0:11:4.82:945,0,5	1/1:7,0:7:18.02:1030,18,0	1/1:8,0:8:21.07:1295,21,0	1/1:4,0:4:12.03:728,12,0	1/1:7,0:7:17.29:723,17,0	./.
chr10	35685062	.	A	AG	6619.44	PASS	AB=0.764;AC=34;AF=0.630;AN=54;BaseQRankSum=-7.748;DP=390;FS=1.548;HRun=5;HaplotypeScore=64.2835;InbreedingCoeff=0.8471;MQ=94.16;MQ0=0;MQRankSum=-3.505;QD=26.27;ReadPosRankSum=0.923;VQSLOD=4.3657;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:32.96:0,33,319	1/1:0,10:10:30.10:394,30,0	0/1:44,1:35:25.70:26,0,293	0/0:34,0:25:18.50:0,18,436	0/0:11,0:11:27.07:0,27,287	1/1:0,9:9:24.08:315,24,0	1/1:0,9:9:27.09:354,27,0	1/1:1,26:27:77.99:879,78,0	0/0:6,0:6:15.04:0,15,160	1/1:0,11:11:33.10:419,33,0	1/1:3,13:16:35.95:425,36,0	0/0:17,0:17:42:0,42,421	1/1:0,14:14:33.11:431,33,0	1/1:2,6:8:18.06:236,18,0	1/1:0,28:28:60.19:785,60,0	0/0:18,0:17:44.89:0,45,438	0/0:14,0:14:29.98:0,30,291	0/1:2,9:11:5.01:288,0,5	1/1:1,9:10:27.08:342,27,0	1/1:1,9:10:21.07:275,21,0	1/1:0,5:5:12.04:157,12,0	1/1:0,7:7:20.98:253,21,0	0/0:14,0:14:33.08:0,33,352	0/0:10,0:10:21.01:0,21,213	1/1:0,11:11:27.09:354,27,0	1/1:0,10:10:30.09:379,30,0	1/1:6,5:11:29.77:308,30,0	./.
chr10	35685989	.	TA	T	6156.78	PASS	AB=0.562;AC=50;AF=0.893;AN=56;BaseQRankSum=-4.361;DP=610;FS=0.000;HRun=14;HaplotypeScore=73.5363;InbreedingCoeff=0.5167;MQ=75.67;MQ0=6;MQRankSum=-2.848;QD=11.84;ReadPosRankSum=5.341;VQSLOD=4.6704;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:6,20:26:26.97:272,0,27	1/1:0,9:9:26.77:185,27,0	0/0:41,0:20:11.09:0,11,178	0/0:47,0:25:18.09:0,18,151	1/1:10,25:36:4.19:381,4,0	1/1:4,26:30:56.48:390,56,0	1/1:5,16:22:18.71:230,19,0	1/1:10,18:29:55.69:387,56,0	1/1:1,11:12:20.83:144,21,0	1/1:14,7:21:17.73:122,18,0	1/1:9,16:25:14.83:230,15,0	1/1:4,17:21:49.76:334,50,0	1/1:4,5:9:17.80:123,18,0	1/1:6,16:22:44.60:308,45,0	0/1:4,14:19:10.22:174,0,10	1/1:5,15:20:7.82:198,8,0	1/1:2,17:19:41.64:287,42,0	1/1:5,12:17:10.69:183,11,0	1/1:9,6:15:17.74:120,18,0	1/1:13,19:32:32.33:311,32,0	1/1:3,5:8:8.92:62,9,0	1/1:3,12:15:35.69:247,36,0	1/1:4,23:27:61.89:421,62,0	1/1:3,7:10:11.90:82,12,0	1/1:4,17:22:46.65:314,47,0	1/1:8,20:28:52.01:343,52,0	1/1:2,9:11:11.90:82,12,0	1/1:4,11:15:32.65:226,33,0
chr10	35686907	.	G	GT	1475.28	PASS	AB=0.991;AC=31;AF=0.554;AN=56;BaseQRankSum=5.788;DP=655;FS=1.388;HRun=0;HaplotypeScore=389.5491;InbreedingCoeff=-0.3326;MQ=49.50;MQ0=0;MQRankSum=-7.860;QD=2.40;ReadPosRankSum=12.465;VQSLOD=-0.0684;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:33:69:69,0,116	1/1:6,0:6:9.81:27,10,0	0/0:11,0:11:17.40:0,17,143	0/0:8,0:8:16.52:0,17,78	1/1:24,0:24:17.52:81,18,0	0/1:28,1:29:10.48:96,0,10	0/1:31,0:31:86.68:87,0,89	0/1:37,0:37:21.19:21,0,67	0/1:20,0:20:0.36:58,0,0	0/1:24,1:25:29.08:50,0,29	0/1:16,0:16:37.96:38,0,43	1/1:51,0:51:42.57:176,43,0	0/1:21,0:21:32.18:63,0,32	1/1:31,0:31:4.62:93,5,0	0/1:37,0:37:10.02:131,0,10	0/1:32,0:32:39.69:66,0,40	0/1:18,0:18:11.48:11,0,115	0/1:17,0:17:8.33:8,0,64	0/0:22,0:22:6.76:0,7,166	1/1:26,0:26:40.45:124,40,0	0/1:25,1:26:6.57:49,0,7	1/1:12,0:12:19.27:57,19,0	0/1:13,1:14:39.67:92,0,40	0/1:17,0:17:18.44:18,0,131	0/1:19,0:19:33.59:58,0,34	0/1:39,0:38:16.52:121,0,17	0/1:23,0:23:38.06:38,0,75	0/1:10,0:10:8.25:8,0,59
chr10	35687353	.	CT	C	2491.20	PASS	AB=0.785;AC=16;AF=0.286;AN=56;BaseQRankSum=14.394;DP=515;FS=105.682;HRun=1;HaplotypeScore=107.8534;InbreedingCoeff=-0.3909;MQ=67.40;MQ0=0;MQRankSum=-9.599;QD=7.69;ReadPosRankSum=5.628;VQSLOD=-0.0981;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:54.17:0,54,822	0/1:5,8:13:99:244,0,121	0/0:14,0:14:39.11:0,39,617	0/0:13,0:13:25.76:0,26,392	0/1:19,10:29:71.80:72,0,426	0/1:9,3:12:68.77:69,0,383	0/0:14,1:15:7.07:0,7,510	0/0:24,0:24:72.22:0,72,1089	0/0:18,1:19:22.23:0,22,813	0/1:13,6:19:99:287,0,320	0/1:13,11:24:99:293,0,342	0/1:10,3:13:65.64:66,0,438	0/1:15,3:18:53.57:54,0,586	0/0:15,0:15:39.13:0,39,619	0/1:23,2:25:0.77:1,0,868	0/0:16,1:17:13.18:0,13,659	0/1:10,1:11:13.93:14,0,219	0/0:12,0:12:30.10:0,30,478	0/0:13,0:13:35.41:0,35,537	0/1:17,6:23:99:251,0,449	0/0:10,0:10:27.09:0,27,427	0/1:16,8:24:99:356,0,338	0/1:13,10:23:99:205,0,220	0/0:14,0:14:18.05:0,18,253	0/1:23,7:30:99:339,0,606	0/1:21,10:31:99:225,0,881	0/1:20,5:25:99:149,0,546	0/1:3,1:4:22.94:23,0,131
chr10	35689253	.	GT	G	4217.62	PASS	AB=0.668;AC=52;AF=0.929;AN=56;BaseQRankSum=2.736;DP=376;FS=6.991;HRun=1;HaplotypeScore=212.5458;InbreedingCoeff=0.1690;MQ=63.45;MQ0=4;MQRankSum=-3.907;QD=11.22;ReadPosRankSum=3.963;VQSLOD=3.3014;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,17:18:29.69:203,30,0	1/1:0,8:8:17.86:128,18,0	0/1:26,3:15:62.26:62,0,75	0/1:33,7:23:99:160,0,225	0/1:0,10:10:0:0,0,0	1/1:1,10:12:23.80:169,24,0	1/1:0,13:13:23.78:167,24,0	1/1:0,9:12:35.53:243,36,0	1/1:0,14:16:38.19:261,38,0	1/1:0,18:19:51.84:371,52,0	1/1:0,5:5:2.96:20,3,0	1/1:0,19:19:47.58:334,48,0	1/1:0,13:13:35.49:240,35,0	1/1:1,13:14:25.16:182,25,0	1/1:0,14:14:35.61:243,36,0	1/1:0,5:5:14.88:105,15,0	1/1:0,10:11:29.22:196,29,0	1/1:0,8:8:17.58:120,18,0	1/1:0,8:8:23.90:186,24,0	1/1:1,4:5:8.04:52,8,0	1/1:0,18:19:17.76:125,18,0	1/1:0,6:6:5.92:39,6,0	0/1:0,13:13:0.02:0,0,0	1/1:0,11:11:11.60:79,12,0	1/1:1,14:15:17.84:127,18,0	1/1:1,7:8:3.33:132,3,0	1/1:0,8:9:25.35:169,25,0	1/1:1,5:6:15.29:102,15,0
chr10	35689255	.	GT	G	4162.63	PASS	AB=0.710;AC=52;AF=0.929;AN=56;BaseQRankSum=3.327;DP=386;FS=10.407;HRun=1;HaplotypeScore=214.2866;InbreedingCoeff=0.1764;MQ=66.32;MQ0=4;MQRankSum=-3.623;QD=10.78;ReadPosRankSum=4.872;VQSLOD=1.1600;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,17:18:29.69:202,30,0	1/1:0,8:8:20.84:147,21,0	0/1:34,3:17:63.85:64,0,177	0/1:47,4:25:99:145,0,277	0/1:0,10:10:0:0,0,0	1/1:1,10:11:20.80:144,21,0	1/1:0,13:13:20.82:146,21,0	1/1:3,9:12:35.53:242,36,0	1/1:3,13:16:41.16:280,41,0	1/1:1,18:19:51.07:369,51,0	1/1:0,5:5:2.96:20,3,0	1/1:0,19:19:50.04:351,50,0	1/1:0,13:13:34.98:239,35,0	1/1:1,13:14:23.39:164,23,0	1/1:0,14:14:35.60:242,36,0	1/1:0,5:5:14.88:105,15,0	1/1:1,10:11:29.22:195,29,0	1/1:0,8:8:17.58:119,18,0	1/1:0,8:8:23.90:186,24,0	1/1:1,4:5:8.04:52,8,0	1/1:1,18:19:17.76:124,18,0	1/1:0,6:6:8.89:59,9,0	0/1:0,13:13:0.02:0,0,0	1/1:1,11:11:11.60:79,12,0	1/1:0,14:14:13.75:102,14,0	1/1:1,7:8:4.32:133,4,0	1/1:2,7:9:25.35:169,25,0	1/1:3,3:6:14.71:82,15,0
chr10	35689270	.	GA	G	8237.66	PASS	AB=0.667;AC=51;AF=0.911;AN=56;BaseQRankSum=1.277;DP=483;FS=14.233;HRun=2;HaplotypeScore=216.1394;InbreedingCoeff=0.5807;MQ=69.09;MQ0=13;MQRankSum=-4.980;QD=20.29;ReadPosRankSum=5.292;VQSLOD=2.5484;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,16:17:30.09:385,30,0	1/1:0,9:9:24.08:304,24,0	0/1:61,4:21:6.04:6,0,380	0/0:75,0:27:27.28:0,27,384	0/1:1,8:9:0:0,0,0	1/1:1,11:12:18.04:219,18,0	1/1:5,15:19:24.03:278,24,0	1/1:5,7:12:21.07:272,21,0	1/1:1,18:19:45.15:583,45,0	1/1:0,19:19:54.17:696,54,0	1/1:0,8:8:4.82:44,5,0	1/1:0,25:25:57.18:733,57,0	1/1:0,20:20:54.17:692,54,0	1/1:2,15:17:30.09:380,30,0	1/1:1,14:14:36.12:464,36,0	1/1:0,8:8:12.04:155,12,0	1/1:0,10:10:27.09:349,27,0	1/1:0,5:5:12.04:155,12,0	1/1:2,11:12:33.11:427,33,0	1/1:0,4:4:8.64:103,9,0	1/1:1,18:19:18.06:232,18,0	1/1:0,6:6:9.03:117,9,0	0/1:1,8:9:0.01:0,0,0	1/1:2,10:11:12.03:155,12,0	1/1:3,14:17:21.01:253,21,0	1/1:0,14:14:42.14:543,42,0	1/1:1,13:14:33.11:423,33,0	1/1:2,6:8:21.07:269,21,0
chr10	35689277	.	AG	A	9591.53	PASS	AB=0.930;AC=53;AF=0.946;AN=56;BaseQRankSum=-0.656;DP=503;FS=6.690;HRun=2;HaplotypeScore=209.2511;InbreedingCoeff=0.3598;MQ=69.03;MQ0=13;MQRankSum=-4.656;QD=22.62;ReadPosRankSum=3.326;VQSLOD=4.2665;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,14:17:27.07:340,27,0	1/1:0,9:9:24.08:307,24,0	0/1:61,5:21:31.33:31,0,356	0/0:78,1:28:8.19:0,8,378	1/1:0,8:8:3.01:37,3,0	1/1:0,12:12:30.07:357,30,0	1/1:1,18:18:36.06:429,36,0	1/1:2,11:13:30.07:389,30,0	1/1:0,19:19:57.18:727,57,0	1/1:2,18:20:54.16:696,54,0	1/1:1,8:9:4.25:41,4,0	1/1:1,29:30:78.22:973,78,0	1/1:1,21:22:57.18:734,57,0	1/1:1,17:18:39.12:492,39,0	1/1:0,13:12:33.11:423,33,0	1/1:0,10:10:27.09:338,27,0	1/1:2,9:11:27.07:336,27,0	1/1:2,3:5:8.99:113,9,0	1/1:3,13:15:42.13:531,42,0	1/1:1,2:3:5.64:77,6,0	1/1:7,17:24:22.28:260,22,0	1/1:1,6:7:12.03:141,12,0	1/1:1,7:8:2.84:34,3,0	1/1:1,10:10:14.97:194,15,0	1/1:0,16:16:27.07:346,27,0	1/1:3,12:15:39.09:500,39,0	1/1:0,13:13:33.11:427,33,0	1/1:2,8:10:27.05:317,27,0
chr10	35693548	.	CTTGTTTATTTGT	C	16866.67	PASS	AB=1.000;AC=39;AF=0.696;AN=56;BaseQRankSum=6.433;DP=566;FS=7.354;HRun=0;HaplotypeScore=210.6985;InbreedingCoeff=0.7055;MQ=73.33;MQ0=2;MQRankSum=-6.413;QD=39.22;ReadPosRankSum=0.276;VQSLOD=3.4482;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:35,0:35:66.68:67,0,3198	1/1:2,8:10:14.84:360,15,0	0/0:31,0:27:62.28:0,62,1603	0/0:17,0:15:36.01:0,36,706	0/1:31,0:31:68.68:69,0,3141	1/1:2,19:21:30.10:1095,30,0	1/1:3,12:15:6.02:220,6,0	1/1:4,25:29:74.21:792,74,0	0/0:15,0:15:15.14:0,15,1740	1/1:6,27:33:74.98:1727,75,0	1/1:2,18:20:41.69:1071,42,0	0/0:17,0:17:39.13:0,39,869	1/1:1,19:21:29.93:1003,30,0	1/1:0,18:18:33.11:1205,33,0	1/1:1,23:24:35.85:1318,36,0	0/0:21,0:21:7.20:0,7,2474	0/0:21,0:21:10.20:0,10,2366	1/1:0,11:11:18.06:660,18,0	1/1:2,18:20:53.92:879,54,0	1/1:2,22:24:53.91:1447,54,0	1/1:0,5:5:9.03:169,9,0	1/1:1,20:22:50.78:1378,51,0	0/1:23,0:23:1.70:2,0,768	0/0:14,0:14:27.09:0,27,609	1/1:2,19:21:21.07:769,21,0	1/1:4,20:24:57.10:1511,57,0	1/1:1,21:22:29.60:1099,30,0	1/1:1,0:1:3:25,3,0
chr10	35693551	.	GTTTA	G	8090.05	PASS	AB=1.000;AC=46;AF=0.821;AN=56;BaseQRankSum=9.359;DP=548;FS=8.164;HRun=0;HaplotypeScore=162.7256;InbreedingCoeff=0.4281;MQ=72.09;MQ0=3;MQRankSum=-6.681;QD=16.89;ReadPosRankSum=2.105;VQSLOD=3.6291;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:35,0:35:99:130,0,856	1/1:9,0:9:14.83:131,15,0	0/0:32,0:27:58.47:0,58,961	0/0:17,0:13:36.01:0,36,473	0/1:30,0:30:99:119,0,849	1/1:20,0:20:30.08:332,30,0	1/1:13,0:13:6.02:68,6,0	1/1:28,0:28:61.81:441,62,0	0/1:15,0:15:6.87:7,0,497	1/1:29,0:29:71.92:684,72,0	1/1:19,0:20:41.67:384,42,0	1/1:1,16:17:21.15:663,21,0	1/1:21,0:21:29.92:316,30,0	1/1:18,0:18:33.09:365,33,0	1/1:24,0:24:36.02:402,36,0	0/0:20,0:20:5.06:0,5,671	0/1:22,0:22:72.78:73,0,641	1/1:11,0:11:18.05:202,18,0	1/1:19,0:19:50.89:456,51,0	1/1:23,0:23:50.74:475,51,0	1/1:5,0:5:2.52:19,3,0	1/1:21,0:21:50.38:455,50,0	1/1:1,21:22:44.75:727,45,0	1/1:0,14:14:27.09:511,27,0	1/1:19,0:19:21.06:234,21,0	1/1:21,0:21:54.01:536,54,0	1/1:22,0:22:29.65:336,30,0	1/1:1,0:1:3:25,3,0
chr10	35695030	.	TC	T	5436.30	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=13.154;DP=709;FS=0.690;HRun=4;HaplotypeScore=67.2807;InbreedingCoeff=0.9759;MQ=84.00;MQ0=0;MQRankSum=-1.923;QD=33.15;ReadPosRankSum=1.477;VQSLOD=5.4764;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,52:53:99:1800,150,0	0/0:10,0:10:30.10:0,30,420	0/0:22,0:22:56.40:0,56,759	0/0:20,0:20:55.06:0,55,725	1/1:2,18:20:48.15:576,48,0	0/0:19,0:19:57.19:0,57,798	0/0:27,0:27:78.25:0,78,1077	0/0:34,0:34:96.31:0,96,1329	1/1:1,21:22:60.18:720,60,0	0/0:29,0:29:84.27:0,84,1160	0/0:18,0:18:51.17:0,51,714	0/0:33,0:33:96.32:0,96,1343	0/0:25,0:25:75.22:0,75,1016	0/0:19,0:19:54.18:0,54,756	0/0:30,0:30:87.28:0,87,1201	1/1:0,37:37:99:1260,105,0	1/1:1,31:32:90.28:1080,90,0	0/0:21,0:20:63.21:0,63,882	0/0:19,0:19:51.17:0,51,712	0/0:23,0:23:69.21:0,69,931	0/0:41,0:41:99:0,117,1621	0/0:27,0:27:81.26:0,81,1116	0/0:21,0:21:63.20:0,63,864	0/0:23,0:23:63.21:0,63,882	0/0:30,0:30:87.27:0,87,1187	0/0:30,0:30:84.26:0,84,1157	0/0:21,0:21:63.21:0,63,881	0/0:3,0:3:6.02:0,6,84
chr10	35698868	.	TTACCC	T	7752.29	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=15.166;DP=690;FS=1.605;HRun=0;HaplotypeScore=128.7159;InbreedingCoeff=0.9027;MQ=81.99;MQ0=0;MQRankSum=-5.268;QD=46.98;ReadPosRankSum=1.553;VQSLOD=5.0219;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,34:35:84.25:1719,84,0	0/0:6,0:6:18.05:0,18,491	0/0:25,0:25:69.23:0,69,1834	0/1:14,0:14:7.05:7,0,848	1/1:0,26:26:75.21:1521,75,0	0/0:19,0:19:51.18:0,51,1561	0/0:24,0:24:72.23:0,72,2087	0/0:38,0:38:99:0,105,3001	1/1:4,16:20:42.14:854,42,0	0/0:32,0:32:87.30:0,87,2663	0/0:20,0:20:60.21:0,60,1816	0/0:24,0:24:72.25:0,72,2220	0/0:28,0:28:81.28:0,81,2489	0/0:29,0:29:84.29:0,84,2602	0/0:26,0:26:75.26:0,75,2223	1/1:1,32:33:78.27:1636,78,0	1/1:1,36:37:96.33:2015,96,0	0/0:23,0:23:69.24:0,69,2130	0/0:24,0:24:60.20:0,60,1733	0/0:27,0:27:75.25:0,75,2230	0/0:26,0:26:75.26:0,75,2285	0/0:19,0:19:57.18:0,57,1677	0/0:21,0:21:54.19:0,54,1631	0/0:23,0:23:66.21:0,66,1956	0/0:28,0:28:81.26:0,81,2429	0/0:26,0:26:75.24:0,75,2186	0/0:23,0:23:69.23:0,69,2070	0/0:14,0:14:42.14:0,42,1212
chr10	35700081	.	G	GCC	12305.87	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-13.740;DP=625;FS=6.266;HRun=7;HaplotypeScore=76.8551;InbreedingCoeff=0.9888;MQ=78.50;MQ0=0;MQRankSum=-1.371;QD=33.62;ReadPosRankSum=-3.280;VQSLOD=4.1000;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:75.20:0,75,873	1/1:0,5:6:17.55:255,18,0	0/0:16,0:16:45.11:0,45,511	0/0:11,0:11:29.83:0,30,339	0/0:20,0:20:45.09:0,45,502	1/1:2,24:26:63.22:1032,63,0	1/1:7,26:36:78.26:1239,78,0	1/1:7,27:36:84.22:1260,84,0	0/0:29,0:29:81.24:0,81,944	1/1:3,16:19:48.10:691,48,0	1/1:3,0:3:9.01:99,9,0	0/0:35,0:35:96.28:0,96,1119	1/1:3,11:15:24.08:390,24,0	1/1:0,20:20:42.14:689,42,0	1/1:4,18:22:54.18:885,54,0	0/0:25,0:25:72.21:0,72,839	0/0:33,0:33:96.20:0,96,1071	1/1:1,18:20:45.15:739,45,0	1/1:5,10:15:30.08:453,30,0	1/1:2,14:16:26.94:400,27,0	1/1:9,35:48:69.52:1133,70,0	1/1:1,13:14:36.12:591,36,0	0/0:18,0:18:23.96:0,24,269	0/0:40,0:40:99:0,114,1316	1/1:5,13:18:33.11:541,33,0	1/1:6,18:25:57.19:926,57,0	1/1:2,9:11:27.09:441,27,0	1/1:4,12:16:33.11:542,33,0
chr10	35701107	.	T	TA	20042.91	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-17.511;DP=780;FS=10.833;HRun=1;HaplotypeScore=68.6283;InbreedingCoeff=0.9997;MQ=82.60;MQ0=0;MQRankSum=-3.636;QD=41.41;ReadPosRankSum=0.540;VQSLOD=4.6421;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,144,1869	1/1:0,12:12:36.12:540,36,0	0/0:28,0:28:80.27:0,80,987	0/0:16,0:16:24.82:0,25,475	0/0:18,0:18:54.16:0,54,687	1/1:1,17:18:48.16:719,48,0	1/1:1,23:24:54.18:809,54,0	1/1:0,30:30:90.28:1306,90,0	0/0:27,0:27:78.25:0,78,1011	1/1:0,28:28:84.26:1237,84,0	1/1:0,16:16:48.16:720,48,0	0/0:44,0:44:99:0,129,1674	1/1:1,38:39:99:1664,111,0	1/1:1,33:34:93.31:1388,93,0	1/1:2,35:37:96.33:1439,96,0	0/0:39,0:39:99:0,117,1518	0/0:26,1:27:36.27:0,36,953	1/1:0,25:25:75.25:1124,75,0	1/1:0,26:26:78.22:1126,78,0	1/1:0,23:23:60.16:874,60,0	1/1:1,43:44:99:1708,114,0	1/1:0,26:26:66.22:989,66,0	0/0:20,0:20:57.17:0,57,726	0/0:28,0:28:84.26:0,84,1076	1/1:0,26:26:75.25:1124,75,0	1/1:0,33:33:99:1480,99,0	1/1:0,23:23:63.21:942,63,0	1/1:0,20:20:57.19:852,57,0
chr10	35706913	.	C	CT	28275.84	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-8.153;DP=722;FS=8.743;HRun=1;HaplotypeScore=65.0372;InbreedingCoeff=0.9960;MQ=77.24;MQ0=0;MQRankSum=-9.237;QD=41.40;ReadPosRankSum=4.362;VQSLOD=5.0295;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,32:32:84.28:1259,84,0	1/1:0,8:8:24.08:359,24,0	0/0:20,0:20:57.18:0,57,720	0/0:19,0:19:19.58:0,20,374	1/1:1,25:26:66.09:914,66,0	1/1:1,20:21:54.18:809,54,0	1/1:0,16:16:48.16:720,48,0	1/1:1,31:32:96.32:1432,96,0	1/1:0,27:27:78.26:1168,78,0	1/1:2,32:34:96.33:1437,96,0	1/1:0,25:25:75.21:1099,75,0	1/1:0,28:28:75.25:1124,75,0	1/1:0,40:40:99:1664,111,0	1/1:1,21:22:60.20:900,60,0	1/1:0,33:33:93.32:1394,93,0	1/1:0,33:33:96.33:1439,96,0	1/1:0,23:23:57.19:854,57,0	1/1:0,24:24:72.24:1079,72,0	1/1:1,20:21:63.20:915,63,0	1/1:1,27:28:72.24:1079,72,0	1/1:0,32:32:93.32:1394,93,0	1/1:2,18:20:54.18:809,54,0	1/1:0,22:22:54.04:809,54,0	1/1:0,26:26:72.24:1079,72,0	1/1:1,26:27:78.26:1169,78,0	1/1:2,36:38:99:1619,108,0	1/1:3,25:28:72.14:1029,72,0	1/1:1,16:17:48.16:720,48,0
chr10	35707929	.	C	CT	5690.75	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-12.455;DP=769;FS=2.952;HRun=3;HaplotypeScore=71.9108;InbreedingCoeff=0.9999;MQ=85.16;MQ0=0;MQRankSum=-1.022;QD=36.95;ReadPosRankSum=3.505;VQSLOD=5.4307;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,36:41:99:1386,99,0	0/0:11,0:11:33.10:0,33,395	0/0:26,0:26:57.17:0,57,676	0/0:22,0:22:51.71:0,52,598	1/1:0,15:15:45.11:608,45,0	0/0:20,0:20:54.15:0,54,637	0/0:28,0:28:78.24:0,78,936	0/0:30,0:30:78.21:0,78,907	1/1:2,30:32:90.30:1260,90,0	0/0:31,0:31:84.26:0,84,1008	0/0:16,0:16:42.13:0,42,504	0/0:39,0:39:99:0,117,1392	0/0:27,0:27:81.24:0,81,960	0/0:29,0:29:84.24:0,84,995	0/0:31,0:31:87.25:0,87,1032	1/1:2,27:29:75.25:1051,75,0	1/1:2,35:37:99:1387,99,0	0/0:28,0:28:81.23:0,81,957	0/0:19,0:19:54.17:0,54,648	0/0:15,0:15:42.12:0,42,493	0/0:62,0:62:99:0,178,2123	0/0:25,0:25:66.20:0,66,792	0/0:17,0:17:48.15:0,48,575	0/0:36,0:36:99:0,102,1223	0/0:25,0:25:75.23:0,75,900	0/0:39,0:39:99:0,99,1188	0/0:24,0:24:72.22:0,72,860	0/0:15,0:15:45.14:0,45,540
chr10	35709386	.	AC	A	5241.68	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=11.961;DP=792;FS=11.172;HRun=3;HaplotypeScore=73.7469;InbreedingCoeff=0.9996;MQ=83.39;MQ0=0;MQRankSum=-2.176;QD=30.30;ReadPosRankSum=4.061;VQSLOD=4.0259;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,50:53:99:1376,111,0	0/0:9,0:9:27.09:0,27,389	0/0:28,0:28:75.22:0,75,1043	0/0:17,0:17:48.13:0,48,652	1/1:1,27:28:81.25:1004,81,0	0/0:27,0:27:81.25:0,81,1141	0/0:40,0:40:99:0,117,1650	0/0:32,0:32:96.32:0,96,1366	1/1:0,24:24:60.19:744,60,0	0/0:37,0:37:99:0,108,1511	0/0:19,0:19:57.18:0,57,797	0/0:29,0:29:84.28:0,84,1206	0/0:36,0:36:99:0,105,1449	0/0:27,0:27:81.25:0,81,1140	0/0:35,0:35:96.28:0,96,1326	1/1:0,37:37:96.30:1189,96,0	1/1:2,29:31:75.23:929,75,0	0/0:21,0:21:57.19:0,57,816	0/0:21,0:21:60.17:0,60,825	0/0:19,0:19:57.17:0,57,801	0/0:49,0:49:99:0,141,1991	0/0:25,0:25:75.25:0,75,1078	0/0:16,0:16:48.16:0,48,690	0/0:30,0:30:90.26:0,90,1210	0/0:28,0:28:81.25:0,81,1131	0/0:27,0:27:81.26:0,81,1147	0/0:37,0:36:99:0,111,1561	0/0:10,0:10:30.10:0,30,430
chr10	35711207	.	TTTTG	T	5202.78	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=13.109;DP=728;FS=6.361;HRun=0;HaplotypeScore=118.3031;InbreedingCoeff=0.9978;MQ=72.90;MQ0=0;MQRankSum=-2.838;QD=36.38;ReadPosRankSum=4.342;VQSLOD=4.9502;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,47:54:99:1982,114,0	0/0:7,0:7:18.06:0,18,457	0/0:30,0:28:60.19:0,60,1223	0/0:31,0:31:73.92:0,74,1815	1/1:3,16:19:42.06:666,42,0	0/0:24,0:24:69.22:0,69,1670	0/0:26,0:26:66.21:0,66,1593	0/0:33,0:33:69.23:0,69,1701	1/1:1,19:20:48.16:834,48,0	0/0:23,0:23:60.20:0,60,1419	0/0:15,0:15:39.13:0,39,965	0/0:27,0:27:69.23:0,69,1692	0/0:17,0:17:51.18:0,51,1260	0/0:27,0:27:75.26:0,75,1824	0/0:33,0:33:84.29:0,84,2086	1/1:4,15:19:39.13:678,39,0	1/1:4,27:31:60.21:1043,60,0	0/0:48,0:48:99:0,123,3006	0/0:19,0:19:39.13:0,39,974	0/0:18,0:18:39.13:0,39,990	0/0:51,0:51:99:0,117,2869	0/0:25,0:25:66.23:0,66,1647	0/0:23,0:23:57.18:0,57,1395	0/0:39,0:39:99:0,105,2810	0/0:14,0:14:33.11:0,33,838	0/0:27,0:27:72.25:0,72,1763	0/0:19,0:18:51.17:0,51,1275	0/0:9,0:9:27.09:0,27,645
chr10	35711362	.	GGGTTCGGTTGCCCA	G	19485.95	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=1.153;DP=542;FS=10.342;HRun=0;HaplotypeScore=200.8182;InbreedingCoeff=0.7417;MQ=75.97;MQ0=0;MQRankSum=-5.892;QD=38.51;ReadPosRankSum=5.113;VQSLOD=2.9947;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,11:24:12.04:330,12,0	1/1:5,5:10:6.49:238,6,0	0/0:21,0:21:15.05:0,15,623	0/0:15,0:15:26.75:0,27,905	1/1:9,14:23:21.07:705,21,0	1/1:6,10:15:27.09:1070,27,0	1/1:9,24:33:30.10:1189,30,0	1/1:28,0:28:23.77:178,24,0	1/1:6,16:22:39.13:1545,39,0	1/1:13,7:20:29.79:891,30,0	1/1:2,8:10:15.05:531,15,0	1/1:12,18:30:42.14:1664,42,0	1/1:6,8:14:18.06:713,18,0	1/1:8,22:30:45.15:1783,45,0	1/1:3,20:23:48.16:1820,48,0	1/1:10,16:26:30.10:1189,30,0	1/1:14,13:27:24.08:870,24,0	1/1:15,7:22:8.96:256,9,0	1/1:6,6:12:16.46:418,16,0	1/1:2,3:5:9.03:357,9,0	1/1:18,18:36:11.72:410,12,0	1/1:3,7:10:12.04:475,12,0	1/1:6,2:8:6.02:238,6,0	1/1:11,15:26:11.71:475,12,0	1/1:7,8:15:9.03:276,9,0	1/1:6,9:15:27.07:917,27,0	1/1:7,9:16:11.81:475,12,0	1/1:1,4:5:12.04:475,12,0
chr10	35713395	.	C	CTCA	33488.13	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=-15.853;DP=838;FS=3.958;HRun=0;HaplotypeScore=128.9373;InbreedingCoeff=0.9989;MQ=83.12;MQ0=0;MQRankSum=-9.194;QD=53.67;ReadPosRankSum=3.106;VQSLOD=7.0902;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,102,1690	1/1:2,9:12:24.08:543,24,0	0/0:32,0:32:80.88:0,81,1291	0/0:25,0:25:66.21:0,66,1035	0/0:30,0:30:81.26:0,81,1320	1/1:0,17:17:39.13:883,39,0	1/1:0,31:31:84.29:1899,84,0	1/1:3,26:31:78.21:1667,78,0	0/0:38,0:38:99:0,111,1795	1/1:5,24:29:81.28:1829,81,0	1/1:4,9:13:24.08:539,24,0	1/1:3,33:37:78.15:1765,78,0	1/1:7,32:41:99:2356,105,0	1/1:3,35:38:99:2293,102,0	1/1:2,43:47:99:2649,117,0	0/0:21,0:21:60.21:0,60,999	0/0:30,0:30:90.29:0,90,1468	1/1:2,40:42:99:2377,105,0	1/1:5,10:16:39.12:831,39,0	1/1:1,13:15:27.09:610,27,0	1/1:12,68:80:99:3798,168,0	1/1:1,20:21:60.21:1357,60,0	1/1:3,23:26:54.19:1222,54,0	1/1:4,35:39:81.11:1828,81,0	1/1:2,18:22:51.18:1155,51,0	1/1:4,20:27:75.18:1520,75,0	1/1:4,26:30:78.27:1756,78,0	1/1:0,9:9:27.09:612,27,0
chr10	35713522	.	GTA	G	4733.10	PASS	AB=0.991;AC=34;AF=0.607;AN=56;BaseQRankSum=-12.042;DP=722;FS=2.621;HRun=0;HaplotypeScore=125.4176;InbreedingCoeff=-0.2320;MQ=52.86;MQ0=18;MQRankSum=3.287;QD=7.52;ReadPosRankSum=-8.617;VQSLOD=2.1407;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,38:39:15.05:228,15,0	0/0:6,0:6:3.80:0,4,10	0/0:44,0:15:10.52:0,11,200	0/0:43,0:14:17.82:0,18,268	1/1:1,15:16:2.68:45,3,0	0/1:28,0:28:10.32:178,0,10	0/1:23,0:23:35.39:138,0,35	0/1:17,0:16:37.98:181,0,38	1/1:1,24:25:11.69:161,12,0	0/1:26,0:26:96.87:266,0,97	0/1:13,0:13:24.49:54,0,24	0/1:26,1:26:33.83:236,0,34	0/1:28,0:28:6.91:180,0,7	0/1:36,1:37:36.54:180,0,37	0/1:40,0:39:62.47:266,0,62	1/1:2,24:26:17.85:229,18,0	1/1:24,3:27:56.66:621,57,0	0/1:32,0:31:12.96:135,0,13	0/1:8,0:7:3.59:69,0,4	1/1:19,0:19:9.49:225,9,0	0/1:47,0:45:5.40:325,0,5	0/1:17,0:17:6.79:160,0,7	0/1:10,1:11:49.71:50,0,55	1/1:0,32:31:15.05:228,15,0	1/1:21,0:21:4.22:78,4,0	0/1:30,0:30:37.67:284,0,38	1/1:25,0:25:11.78:142,12,0	0/1:14,0:14:40.09:74,0,40
chr10	35714891	.	GTT	G	10415.34	PASS	AB=0.797;AC=52;AF=0.929;AN=56;BaseQRankSum=-2.706;DP=710;FS=8.766;HRun=15;HaplotypeScore=104.8652;InbreedingCoeff=0.4621;MQ=68.97;MQ0=1;MQRankSum=1.471;QD=15.09;ReadPosRankSum=4.164;VQSLOD=3.5508;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,31:39:81.25:700,81,0	1/1:4,8:14:5.63:141,6,0	0/0:20,0:14:24.05:0,24,267	0/1:12,0:10:6.42:6,0,55	1/1:2,18:22:40.34:363,40,0	1/1:4,14:19:38.70:328,39,0	1/1:5,21:29:21.15:420,21,0	1/1:9,11:21:35.59:302,36,0	1/1:7,23:31:62.91:550,63,0	1/1:5,20:25:56.88:496,57,0	1/1:1,6:7:8.86:79,9,0	1/1:4,23:28:47.73:467,48,0	1/1:4,14:19:11.78:252,12,0	1/1:5,19:24:48.36:445,48,0	1/1:11,26:37:44.85:396,45,0	1/1:8,25:35:70.77:580,71,0	1/1:11,28:41:79.94:679,80,0	1/1:5,18:25:56.42:472,56,0	1/1:5,17:24:46.34:372,46,0	1/1:3,15:19:44.38:367,44,0	1/1:7,23:34:28.51:322,29,0	1/1:4,19:24:41.56:355,42,0	1/1:5,21:29:40.14:397,40,0	1/1:6,23:33:56.08:557,56,0	1/1:6,20:31:10.15:376,10,0	1/1:5,16:22:47.56:404,48,0	1/1:8,17:27:32.18:305,32,0	0/1:6,12:19:19.97:284,0,20
chr10	35717022	.	TC	T	2712.09	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=7.243;DP=745;FS=3.105;HRun=5;HaplotypeScore=150.6457;InbreedingCoeff=0.9936;MQ=80.72;MQ0=1;MQRankSum=0.534;QD=28.25;ReadPosRankSum=0.562;VQSLOD=1.6019;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,111,1453	0/0:8,0:8:24.08:0,24,325	0/0:28,0:28:71.38:0,71,897	0/0:39,0:35:56.16:0,56,907	0/0:30,0:30:90.28:0,90,1202	0/0:25,0:25:69.23:0,69,935	0/0:26,0:26:69.19:0,69,915	0/0:31,0:31:90.29:0,90,1213	0/0:25,0:25:69:0,69,822	0/0:20,0:19:54.14:0,54,710	0/0:28,0:28:78.26:0,78,1064	1/1:4,36:40:99:1262,114,0	0/0:30,0:30:87.27:0,87,1167	0/0:26,0:26:72.24:0,72,974	0/0:29,0:28:75.25:0,75,1019	0/0:32,0:32:84.24:0,84,1123	0/0:23,0:23:54.07:0,54,694	0/0:24,0:24:63.21:0,63,850	0/0:31,0:31:84.23:0,84,1116	0/0:23,0:23:63.20:0,63,844	0/0:20,0:20:51.15:0,51,679	0/0:28,0:28:81.23:0,81,1077	1/1:3,21:24:69.17:764,69,0	1/1:7,25:32:74.85:828,75,0	0/0:20,0:20:57.11:0,57,735	0/0:22,0:22:57.14:0,57,744	0/0:28,0:27:78.22:0,78,1035	0/0:5,0:5:15.05:0,15,205
chr10	35717075	.	A	AAGATGAAAAGCTACTT	73486.97	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-6.832;DP=599;FS=7.450;HRun=0;HaplotypeScore=314.1883;InbreedingCoeff=0.9956;MQ=77.71;MQ0=1;MQRankSum=-12.780;QD=179.24;ReadPosRankSum=2.019;VQSLOD=4.2271;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:47:99:0,118,3214	1/1:3,2:5:15.02:622,15,0	0/0:28,0:29:77.13:0,77,3232	0/0:15,0:15:36.11:0,36,1268	1/1:5,16:25:72.18:4372,72,0	1/1:6,16:24:66.19:4842,66,0	1/1:10,6:18:48.16:3247,48,0	1/1:29,0:29:84.28:4424,84,0	1/1:6,13:22:60.21:4582,60,0	1/1:12,11:23:66.23:4557,66,0	1/1:5,8:13:36.11:2411,36,0	0/0:4,0:36:88.85:0,89,2457	1/1:15,13:28:81.21:5032,81,0	1/1:5,6:11:33.10:2302,33,0	1/1:12,9:21:57.15:3810,57,0	1/1:12,8:25:56.91:3838,57,0	1/1:6,8:18:39.13:2745,39,0	1/1:5,5:10:21.03:1376,21,0	1/1:9,8:17:48.16:3036,48,0	1/1:9,10:19:54.15:3816,54,0	1/1:8,7:15:30.04:1619,30,0	1/1:7,9:17:51.09:3196,51,0	0/0:2,0:26:51.65:0,52,1563	0/0:1,0:36:85.48:0,85,2445	1/1:10,11:21:57.20:4108,57,0	1/1:5,9:14:42.14:2725,42,0	1/1:9,14:24:69.23:4935,69,0	1/1:5,5:10:30.06:1895,30,0
chr10	35717097	.	A	AT	15216	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=9.020;DP=663;FS=11.683;HRun=0;HaplotypeScore=284.1469;InbreedingCoeff=0.9992;MQ=82.01;MQ0=0;MQRankSum=-11.418;QD=42.15;ReadPosRankSum=1.222;VQSLOD=1.1231;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,41:42:99:1667,105,0	1/1:0,7:7:21.07:335,21,0	0/0:31,0:31:87.09:0,87,1109	0/0:23,0:23:63.18:0,63,859	0/0:29,0:29:75.24:0,75,1027	0/0:24,0:24:57.19:0,57,795	0/0:24,0:24:60.09:0,60,790	1/1:2,39:41:99:1897,120,0	0/0:22,0:22:66.17:0,66,896	1/1:0,26:26:75.20:1166,75,0	1/1:0,11:11:27.08:422,27,0	0/0:39,0:39:99:0,111,1511	1/1:3,23:26:68.94:1084,69,0	1/1:0,17:17:42.14:666,42,0	1/1:3,21:24:63.21:988,63,0	0/0:27,0:27:75.23:0,75,1046	0/0:22,0:22:56.67:0,57,771	1/1:0,11:11:30.10:479,30,0	1/1:3,23:26:75.26:1191,75,0	1/1:1,16:17:45.15:711,45,0	1/1:0,18:18:38.34:564,38,0	1/1:0,19:19:54.18:857,54,0	0/0:22,0:22:57.19:0,57,796	0/0:39,0:39:93.24:0,93,1276	1/1:1,19:20:51.17:811,51,0	1/1:2,11:14:36.12:565,36,0	1/1:2,24:26:75.21:1143,75,0	1/1:0,16:16:42.14:669,42,0
chr10	35718691	.	G	GT	2701.50	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-2.202;DP=655;FS=10.886;HRun=11;HaplotypeScore=101.6603;InbreedingCoeff=0.9557;MQ=78.91;MQ0=3;MQRankSum=-0.378;QD=14.45;ReadPosRankSum=1.251;VQSLOD=2.9610;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,23:35:8.47:593,8,0	0/0:8,0:8:17.93:0,18,139	0/0:42,0:27:12.80:0,13,173	0/0:36,0:25:15.20:0,15,140	1/1:6,25:31:43.27:593,43,0	0/0:24,1:27:28.25:0,28,378	0/0:19,0:19:26.55:0,27,385	0/0:39,0:40:50.25:0,50,491	1/1:5,13:18:9.66:261,10,0	0/0:21,0:21:53.76:0,54,415	0/0:14,0:14:29.87:0,30,232	1/1:1,2:23:40.14:233,40,0	0/0:20,0:21:26.99:0,27,351	0/0:18,1:19:10.90:0,11,256	0/0:28,0:28:23.24:0,23,419	1/1:4,17:21:27.81:464,28,0	1/1:3,18:23:47.76:455,48,0	0/0:17,0:17:44.80:0,45,348	0/0:20,1:20:20.25:0,20,330	0/0:25,0:25:59.26:0,59,450	0/0:16,0:16:32.85:0,33,254	0/0:19,3:22:17.30:0,17,318	1/1:6,0:17:23.02:135,23,0	1/1:9,0:18:34.09:170,34,0	0/0:22,2:24:29.30:0,29,410	0/0:26,2:28:53.69:0,54,415	0/0:27,0:28:30.30:0,30,451	0/0:10,1:11:11.48:0,11,170
chr10	35720907	.	A	AACC	11236.37	PASS	AB=0.543;AC=44;AF=0.786;AN=56;BaseQRankSum=6.042;DP=332;FS=8.812;HRun=0;HaplotypeScore=58.4590;InbreedingCoeff=0.3060;MQ=44.60;MQ0=11;MQRankSum=-4.591;QD=41.16;ReadPosRankSum=-1.105;VQSLOD=5.3147;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,111,2062	1/1:1,6:7:18.06:404,18,0	0/0:9,0:7:21.07:0,21,369	0/0:12,0:7:17.42:0,17,279	1/1:1,17:16:5.26:689,5,0	1/1:0,12:11:30.10:646,30,0	0/1:2,7:6:44.60:121,0,45	1/1:0,4:2:3.01:69,3,0	1/1:0,11:10:21.07:472,21,0	1/1:0,9:11:33.11:689,33,0	1/1:1,6:6:12.04:271,12,0	1/1:0,0:8:24.08:407,24,0	1/1:0,17:17:51.18:1150,51,0	1/1:0,6:5:12.04:271,12,0	1/1:0,13:12:24.08:538,24,0	0/1:1,6:5:37.50:324,0,37	1/1:1,15:8:21.07:477,21,0	0/1:2,12:13:34.65:383,0,35	1/1:3,6:7:18.06:403,18,0	1/1:0,8:8:24.08:524,24,0	0/1:4,12:13:99:490,0,134	1/1:0,7:6:18.06:406,18,0	1/1:0,0:10:27.56:442,28,0	0/1:1,0:10:34.30:277,0,34	1/1:0,8:7:21.07:457,21,0	0/1:2,17:12:25.83:575,0,26	1/1:0,9:8:21.07:478,21,0	1/1:2,6:6:12.04:276,12,0
chr10	35721661	.	C	CAA	2326.90	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-3.294;DP=660;FS=6.914;HRun=10;HaplotypeScore=82.3559;InbreedingCoeff=0.9767;MQ=64.10;MQ0=15;MQRankSum=0.786;QD=25.85;ReadPosRankSum=1.221;VQSLOD=3.4753;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:46.83:0,47,477	0/0:15,0:15:33.04:0,33,336	0/0:29,0:11:8.75:0,9,96	0/0:39,0:18:20.12:0,20,120	1/1:5,28:34:80.52:1048,81,0	0/0:36,0:35:71.59:0,72,827	0/0:19,0:20:29.63:0,30,408	0/0:28,0:29:51.58:0,52,549	1/1:2,9:11:21.86:354,22,0	0/0:24,0:24:62.67:0,63,603	0/0:26,0:26:62.89:0,63,610	0/0:11,0:11:33.06:0,33,329	0/0:20,0:21:53.83:0,54,524	0/0:21,0:21:45.07:0,45,452	0/0:21,0:22:59.85:0,60,590	1/1:3,10:15:20.04:241,20,0	1/1:3,25:30:59.56:843,60,0	0/0:31,0:33:59.32:0,59,765	0/0:28,0:28:50.50:0,50,536	0/0:27,0:27:75.14:0,75,763	0/0:7,0:7:18.02:0,18,176	0/0:21,0:22:47.83:0,48,540	0/0:24,0:24:54.01:0,54,528	0/0:14,0:14:33.07:0,33,335	0/0:20,0:20:48.09:0,48,488	0/0:31,0:31:77.89:0,78,765	0/0:22,0:21:41.81:0,42,426	0/0:19,0:18:39.05:0,39,397
chr10	35721747	.	GTC	G	13146.46	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=11.967;DP=698;FS=1.069;HRun=0;HaplotypeScore=98.2594;InbreedingCoeff=0.9775;MQ=82.16;MQ0=3;MQRankSum=-0.874;QD=29.68;ReadPosRankSum=4.349;VQSLOD=6.5535;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:87.18:0,87,1359	1/1:1,7:8:9.03:116,9,0	0/0:49,0:40:79.12:0,79,1052	0/0:46,0:36:39.14:0,39,922	0/0:23,0:23:54.16:0,54,879	1/1:3,29:31:78.25:1002,78,0	1/1:4,22:26:51.34:689,51,0	1/1:6,26:32:78.23:974,78,0	0/0:9,0:9:24.08:0,24,396	1/1:4,19:23:60.12:711,60,0	1/1:4,15:19:39.13:501,39,0	0/0:15,0:15:45.14:0,45,730	1/1:2,22:24:6.95:608,7,0	1/1:5,23:27:54.18:694,54,0	1/1:0,24:24:66.21:848,66,0	0/0:24,0:24:68.91:0,69,1163	0/0:22,0:22:63.19:0,63,1033	1/1:3,28:30:66.11:848,66,0	1/1:3,23:26:60.10:708,60,0	1/1:3,26:29:69.22:887,69,0	1/1:1,24:25:66.21:848,66,0	1/1:2,22:23:63.20:810,63,0	0/0:14,0:14:36.09:0,36,550	0/0:16,0:16:48.15:0,48,779	1/1:0,23:23:63.20:810,63,0	1/1:0,22:22:66.18:819,66,0	1/1:0,29:29:78.25:1002,78,0	1/1:7,11:18:21.07:270,21,0
chr10	35722733	.	CT	C	2014.99	PASS	AB=0.737;AC=30;AF=0.536;AN=56;BaseQRankSum=-7.476;DP=462;FS=18.770;HRun=13;HaplotypeScore=92.7980;InbreedingCoeff=0.4850;MQ=61.61;MQ0=13;MQRankSum=2.106;QD=7.96;ReadPosRankSum=5.078;VQSLOD=0.8526;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:27:32.18:0,32,180	1/1:4,5:10:19.90:135,20,0	0/0:25,0:6:8.83:0,9,57	0/0:34,0:17:17.44:0,17,109	0/0:18,0:34:56.05:0,56,324	0/1:9,6:15:2.44:143,0,2	1/1:8,5:14:10.86:71,11,0	1/1:15,10:22:0.40:159,0,0	0/0:11,0:14:20.85:0,21,130	1/1:5,16:22:46.71:334,47,0	0/1:18,9:28:19.79:131,0,20	0/0:9,0:12:13.02:0,13,61	1/1:3,3:6:2.98:22,3,0	1/1:9,2:11:8.58:63,9,0	0/1:9,3:12:17.32:54,0,17	0/0:16,0:17:22.50:0,22,128	0/0:12,0:18:22.50:0,23,136	0/1:8,5:13:9.32:91,0,9	0/1:10,2:12:17.20:54,0,17	1/1:3,12:15:29.75:218,30,0	1/1:2,3:4:8.95:66,9,0	0/1:4,9:13:21.76:127,0,22	0/0:6,0:12:25.16:0,25,129	0/0:9,0:11:5.80:0,6,34	1/1:5,4:9:14.87:109,15,0	1/1:12,7:20:22.66:160,23,0	1/1:7,10:18:31.12:224,31,0	1/1:1,4:5:8.43:53,8,0
chr10	35722748	.	ATTCTT	A	553.06	PASS	AB=0.961;AC=19;AF=0.339;AN=56;BaseQRankSum=2.371;DP=532;FS=28.908;HRun=0;HaplotypeScore=115.1958;InbreedingCoeff=-0.3294;MQ=47.83;MQ0=35;MQRankSum=-5.679;QD=1.67;ReadPosRankSum=-2.399;VQSLOD=-0.4253;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:21.71:0,22,588	0/0:11,0:11:12.93:0,13,123	0/0:40,0:4:2.42:0,2,54	0/1:43,0:14:26.87:27,0,97	0/0:31,0:31:62.96:0,63,720	0/1:13,0:13:31.27:31,0,133	0/0:11,0:10:7.11:0,7,84	0/1:28,0:25:1.52:2,0,301	0/0:14,0:14:23.67:0,24,408	0/0:25,0:25:40.77:0,41,421	0/1:24,0:24:17.71:18,0,217	1/1:7,6:12:20.56:210,21,0	0/1:11,0:10:11.54:12,0,15	0/1:10,0:9:17.64:18,0,32	0/1:12,0:14:3.98:4,0,125	0/0:17,0:14:33.32:0,33,440	0/0:16,0:15:30.43:0,30,404	0/1:14,0:15:29.58:30,0,64	0/1:16,0:17:2.09:2,0,176	0/1:17,0:17:11.62:12,0,182	0/1:7,0:5:29.46:32,0,29	0/1:17,0:17:6.53:7,0,187	0/1:9,2:11:83.76:123,0,84	0/1:12,0:12:14.07:23,0,14	0/1:17,0:18:35.55:36,0,116	0/1:27,0:29:72.88:73,0,247	0/1:28,0:28:51.69:52,0,237	0/0:8,0:6:1.03:0,1,49
chr10	35722770	.	TTTG	T	577.54	PASS	AB=0.983;AC=20;AF=0.357;AN=56;BaseQRankSum=9.987;DP=510;FS=35.433;HRun=0;HaplotypeScore=88.3861;InbreedingCoeff=-0.3743;MQ=37.91;MQ0=44;MQRankSum=-6.308;QD=1.86;ReadPosRankSum=5.625;VQSLOD=-0.1485;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:26:34.69:0,35,392	0/1:8,0:7:12.14:28,0,12	1/1:24,0:1:1.25:3,1,0	0/1:28,0:5:17.16:17,0,62	0/0:26,0:25:46.84:0,47,457	0/1:12,1:12:58.10:58,0,83	0/1:13,0:10:25.80:48,0,26	0/0:35,0:26:4.59:0,5,212	0/0:12,0:12:22.48:0,22,260	0/1:17,0:16:21.30:21,0,130	0/1:17,0:16:24.15:24,0,60	0/1:15,0:15:19.15:19,0,71	1/1:10,0:9:1.16:2,1,0	0/1:7,1:7:22.32:26,0,22	0/1:20,0:20:28:28,0,185	0/0:23,0:20:39.51:0,40,450	0/0:19,0:13:24.11:0,24,286	0/1:16,0:14:38.79:39,0,150	0/0:25,1:22:6.08:0,6,262	0/1:24,0:22:84.21:125,0,84	0/0:7,0:6:5.76:0,6,58	0/1:13,0:12:32.32:32,0,49	0/0:15,0:14:16.34:0,16,179	0/0:9,0:9:8.05:0,8,60	0/1:14,1:15:52.64:59,0,53	0/1:28,0:26:69.34:69,0,85	0/1:31,1:32:99:116,0,212	0/1:9,0:6:14.61:15,0,30
chr10	35725660	.	GTTTC	G	681.10	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=-2.467;DP=591;FS=3.090;HRun=0;HaplotypeScore=128.9241;InbreedingCoeff=0.8424;MQ=65.63;MQ0=1;MQRankSum=-0.411;QD=13.90;ReadPosRankSum=0.006;VQSLOD=3.4554;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:61.39:0,61,1224	0/0:12,0:12:24.07:0,24,471	0/0:17,0:10:7.01:0,7,106	0/1:16,0:12:3.27:3,0,284	0/0:25,0:25:54.03:0,54,843	0/0:21,0:21:54.14:0,54,1024	0/0:16,0:16:30.10:0,30,659	0/0:45,0:45:93.22:0,93,1520	0/0:16,0:16:36.08:0,36,542	0/0:29,0:29:72.22:0,72,1434	0/0:23,0:23:57.10:0,57,1181	1/1:5,11:15:21.07:345,21,0	0/0:21,0:21:51.16:0,51,1101	0/0:13,0:13:30.08:0,30,585	0/0:27,0:27:72.20:0,72,1438	0/0:20,0:20:38.87:0,39,594	0/0:21,0:21:45.15:0,45,763	0/0:19,0:19:36.08:0,36,715	0/0:22,0:22:48.14:0,48,893	0/0:28,0:28:69.22:0,69,1511	0/0:20,0:20:27.02:0,27,532	0/0:10,0:10:27.08:0,27,554	1/1:1,8:9:18.06:294,18,0	1/1:5,3:7:12.03:178,12,0	0/0:25,0:25:63.19:0,63,1262	0/0:31,0:31:78.23:0,78,1483	0/0:34,0:34:90.29:0,90,1918	0/0:22,0:21:57.18:0,57,1227
chr10	35725679	.	T	TC	3493.84	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=-12.183;DP=609;FS=10.619;HRun=0;HaplotypeScore=92.1462;InbreedingCoeff=0.3377;MQ=64.40;MQ0=7;MQRankSum=-0.298;QD=9.37;ReadPosRankSum=-5.270;VQSLOD=1.5760;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:72.11:0,72,866	0/1:10,0:10:21.37:56,0,21	0/0:38,0:10:14.79:0,15,175	0/0:27,0:15:40.93:0,41,342	1/1:2,20:22:59.85:693,60,0	0/1:23,0:22:19.10:60,0,19	0/0:11,0:11:10.52:0,11,35	1/1:47,0:47:21.91:288,22,0	1/1:0,13:13:30.10:398,30,0	1/1:28,0:29:20.09:151,20,0	0/0:21,0:21:25.49:0,25,90	0/0:17,0:16:32.73:0,33,271	0/0:25,0:25:8.75:0,9,63	0/1:15,0:15:16.68:28,0,17	0/1:30,0:30:25.93:64,0,26	1/1:0,18:18:39.04:498,39,0	1/1:1,26:27:62.40:836,62,0	0/1:18,0:18:21.22:21,0,22	1/1:23,0:23:14.67:125,15,0	0/0:26,0:26:33.40:0,33,139	0/1:11,0:11:10.99:14,0,11	0/0:9,0:9:9.66:0,10,33	0/0:13,0:13:29.79:0,30,281	0/0:5,0:4:11.83:0,12,77	0/1:26,0:26:11.63:127,0,12	0/1:27,0:27:0.23:90,0,0	0/1:34,0:34:44.98:45,0,87	0/0:19,0:19:2.01:0,2,44
chr10	35725940	.	C	CTGTGTGTG	6316.07	PASS	AB=0.735;AC=51;AF=0.981;AN=52;BaseQRankSum=-2.427;DP=703;FS=0.000;HRun=0;HaplotypeScore=197.5425;InbreedingCoeff=0.0704;MQ=62.58;MQ0=19;MQRankSum=-0.237;QD=9.98;ReadPosRankSum=2.156;VQSLOD=3.3918;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:36:0:0,0,0	1/1:12,0:10:3.01:72,3,0	./.	./.	1/1:14,0:20:6.02:117,6,0	1/1:16,0:16:6.02:134,6,0	1/1:34,0:31:23.86:453,24,0	1/1:26,0:23:17.98:254,18,0	1/1:11,7:21:18.04:605,18,0	1/1:27,0:24:30.56:677,31,0	1/1:16,0:15:8.94:163,9,0	1/1:24,0:24:9.01:153,9,0	1/1:19,0:18:14.26:268,14,0	1/1:25,0:24:6.49:141,6,0	1/1:34,0:34:5.99:94,6,0	1/1:28,8:46:15.04:488,15,0	1/1:21,6:30:7.42:150,7,0	1/1:9,0:10:5.91:89,6,0	1/1:16,0:15:12.03:292,12,0	1/1:19,0:19:2.79:23,3,0	1/1:51,0:50:23.58:406,24,0	1/1:11,0:11:3:25,3,0	1/1:6,0:5:3.01:63,3,0	1/1:43,0:41:20.10:321,20,0	1/1:19,0:17:3:25,3,0	1/1:30,0:29:39.11:850,39,0	1/1:27,0:27:15.77:294,16,0	1/1:12,0:12:6.02:160,6,0
chr10	35726142	.	TACCTCCA	T	4273.81	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=11.193;DP=639;FS=1.710;HRun=0;HaplotypeScore=146.8811;InbreedingCoeff=0.9814;MQ=90.28;MQ0=1;MQRankSum=-11.619;QD=50.28;ReadPosRankSum=0.931;VQSLOD=4.6985;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,153,5723	0/0:15,0:15:45.15:0,45,1759	0/0:31,0:31:93.29:0,93,3184	0/0:29,0:29:84.29:0,84,3138	1/1:1,10:11:17.74:426,18,0	0/0:18,0:17:51.18:0,51,2045	0/0:21,0:21:63.22:0,63,2544	0/0:30,0:30:87.30:0,87,3450	1/1:1,19:20:42.14:1101,42,0	0/0:19,0:19:57.20:0,57,2247	0/0:15,0:15:39.13:0,39,1366	0/0:19,0:19:57.20:0,57,2242	0/0:24,0:24:72.25:0,72,2715	0/0:24,0:24:69.24:0,69,2707	0/0:29,0:29:81.27:0,81,3092	1/1:0,31:30:72.25:1870,72,0	1/1:4,19:23:36.12:877,36,0	0/0:15,0:15:45.15:0,45,1754	0/0:14,0:14:39.13:0,39,1479	0/0:19,0:19:54.19:0,54,2071	0/0:42,0:41:99:0,126,4903	0/0:13,0:13:39.13:0,39,1491	0/0:14,0:14:39.13:0,39,1490	0/0:38,0:37:99:0,105,4124	0/0:19,0:19:57.20:0,57,2151	0/0:28,0:28:78.27:0,78,2998	0/0:21,0:21:63.22:0,63,2497	0/0:3,0:3:9.01:0,9,266
chr10	35731493	.	TA	T	3210.78	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=10.951;DP=637;FS=3.216;HRun=1;HaplotypeScore=62.2450;InbreedingCoeff=0.9999;MQ=72.38;MQ0=1;MQRankSum=-1.059;QD=35.68;ReadPosRankSum=2.985;VQSLOD=4.0098;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:87.28:0,87,1365	0/0:12,0:12:36.10:0,36,550	0/0:20,0:17:51.17:0,51,771	0/0:24,0:21:51.16:0,51,777	1/1:1,20:21:60.12:795,60,0	0/0:22,0:21:66.20:0,66,995	0/0:14,0:14:42.14:0,42,671	0/0:35,0:35:99:0,105,1654	1/1:0,18:17:45.15:628,45,0	0/0:22,0:22:66.23:0,66,1055	0/0:20,0:20:57.18:0,57,888	0/0:18,0:18:54.18:0,54,862	0/0:16,0:16:48.15:0,48,741	0/0:20,0:20:60.20:0,60,956	0/0:42,0:42:99:0,120,1891	1/1:0,30:30:84.28:1174,84,0	1/1:1,20:21:60.11:774,60,0	0/0:14,0:14:42.01:0,42,579	0/0:18,0:18:51.16:0,51,787	0/0:23,0:23:66.20:0,66,1029	0/0:29,0:29:87.28:0,87,1366	0/0:23,0:23:66.21:0,66,1029	0/0:35,0:34:99:0,99,1553	0/0:22,0:22:66.19:0,66,1006	0/0:16,0:16:45.14:0,45,695	0/0:20,0:20:57.19:0,57,911	0/0:32,0:32:96.33:0,96,1530	0/0:20,0:20:54.16:0,54,833
chr10	35731535	.	G	GA	1249.75	PASS	AB=0.633;AC=6;AF=0.107;AN=56;BaseQRankSum=1.873;DP=610;FS=1.040;HRun=11;HaplotypeScore=74.9557;InbreedingCoeff=0.5650;MQ=65.69;MQ0=1;MQRankSum=-2.119;QD=14.04;ReadPosRankSum=-2.181;VQSLOD=3.4587;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:69.18:0,69,535	0/0:11,0:12:31.91:0,32,235	0/0:24,0:14:10.19:0,10,136	0/0:18,0:14:2.81:0,3,71	1/1:10,12:22:12.83:306,13,0	0/0:23,0:23:50.75:0,51,394	0/0:8,0:8:20.91:0,21,162	0/0:24,0:25:33.42:0,33,392	0/1:9,10:19:3.77:283,0,4	0/0:26,1:27:26.32:0,26,387	0/0:23,0:25:43.75:0,44,367	0/0:15,1:16:5.33:0,5,216	0/0:17,0:18:40.86:0,41,308	0/0:19,0:19:38.80:0,39,296	0/0:32,0:32:71.44:0,71,540	1/1:13,10:24:41.20:439,41,0	0/1:8,13:23:42.83:354,0,43	0/0:12,0:12:28.88:0,29,211	0/0:15,0:15:35.80:0,36,275	0/0:18,1:20:16.40:0,16,296	0/0:27,0:27:64.78:0,65,493	0/0:19,1:21:13.34:0,13,271	0/0:30,4:34:34.33:0,34,439	0/0:16,0:16:32.84:0,33,255	0/0:17,0:18:40.84:0,41,305	0/0:19,0:19:47.80:0,48,369	0/0:30,0:31:76.70:0,77,581	0/0:20,2:26:4.84:0,5,365
chr10	35731653	.	CA	C	2173.74	PASS	AB=0.674;AC=41;AF=0.732;AN=56;BaseQRankSum=0.858;DP=480;FS=9.433;HRun=16;HaplotypeScore=62.0797;InbreedingCoeff=0.1013;MQ=54.21;MQ0=7;MQRankSum=2.747;QD=4.74;ReadPosRankSum=2.503;VQSLOD=1.2326;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:28,2:30:20.94:21,0,275	0/0:3,0:3:0:0,0,0	0/0:12,0:5:5.19:0,5,36	0/0:6,0:1:2.98:0,3,21	1/1:11,7:19:8.41:103,8,0	1/1:6,9:16:18.16:91,18,0	0/1:11,9:20:2.20:61,0,2	1/1:7,15:20:37.19:221,37,0	0/1:5,11:16:4.75:87,0,5	1/1:9,7:17:4.38:118,4,0	0/1:9,4:16:1.37:53,0,1	1/1:0,0:12:18.22:53,18,0	0/1:7,3:10:9.52:10,0,26	1/1:2,2:6:6.99:30,7,0	1/1:14,10:24:18.80:116,19,0	0/1:8,15:23:8.16:144,0,8	1/1:17,15:36:21.65:226,22,0	1/1:11,13:24:5.11:137,5,0	0/1:2,12:16:0.88:141,0,1	1/1:8,8:19:23.40:124,23,0	1/1:7,6:15:14.85:72,15,0	1/1:8,3:12:13.60:77,14,0	1/1:10,0:15:9.91:29,10,0	1/1:4,0:15:22.38:65,22,0	0/1:6,8:17:4.44:69,0,4	1/1:9,7:16:19.74:124,20,0	0/1:11,10:22:4.39:61,0,4	1/1:7,4:12:13.56:77,14,0
chr10	35733028	.	A	ATTATATTATCCAGTTGGTGCTCATGCT	2821.71	PASS	AB=0.708;AC=36;AF=0.947;AN=38;BaseQRankSum=-2.754;DP=49;FS=2.690;HRun=0;HaplotypeScore=39.3885;InbreedingCoeff=-0.1846;MQ=122.47;MQ0=1;MQRankSum=-0.306;QD=62.70;ReadPosRankSum=-1.085;VQSLOD=1.7858;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	1/1:3,0:3:9.03:277,9,0	0/1:3,1:6:17.43:623,0,17	0/1:4,0:6:2.25:432,0,2	1/1:1,0:1:3.01:96,3,0	./.	./.	1/1:2,0:2:6.02:110,6,0	1/1:2,0:2:6.02:173,6,0	1/1:3,0:2:3:29,3,0	./.	./.	./.	1/1:2,0:2:3.01:67,3,0	./.	1/1:2,0:2:6.02:79,6,0	1/1:1,0:1:2.98:22,3,0	1/1:2,0:2:3.01:152,3,0	1/1:2,0:2:6.01:93,6,0	1/1:2,0:2:6.02:223,6,0	1/1:2,0:2:6:156,6,0	1/1:1,0:1:3.01:131,3,0	./.	1/1:3,0:2:6:76,6,0	./.	1/1:1,0:1:3.01:40,3,0	1/1:3,0:3:6.02:104,6,0	1/1:1,0:1:2.99:24,3,0
chr10	35733106	.	G	GGTTT	4360.42	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-5.019;DP=614;FS=0.000;HRun=0;HaplotypeScore=173.6500;InbreedingCoeff=0.9649;MQ=65.99;MQ0=0;MQRankSum=-7.397;QD=45.42;ReadPosRankSum=1.872;VQSLOD=5.3313;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:23:48.11:0,48,760	0/0:8,0:8:12.04:0,12,206	0/0:27,0:25:59.95:0,60,862	0/0:21,0:16:51.17:0,51,868	1/1:6,6:14:18.52:313,19,0	0/0:18,0:17:48.12:0,48,792	0/0:16,0:16:42.02:0,42,599	0/0:38,0:38:84.18:0,84,1317	1/1:6,19:27:60.21:1457,60,0	0/0:24,0:24:57.20:0,57,978	0/0:9,0:9:9.03:0,9,154	0/0:24,0:24:45.07:0,45,709	0/0:28,0:28:63.13:0,63,1002	0/0:21,0:21:51.13:0,51,843	0/0:33,0:33:66.11:0,66,1016	1/1:11,23:36:66.23:1643,66,0	1/1:9,10:19:42.09:948,42,0	0/0:15,0:15:27.09:0,27,459	0/0:17,0:17:45.13:0,45,744	0/0:19,0:19:39.09:0,39,636	0/0:14,0:14:33.04:0,33,505	0/0:27,0:27:38.96:0,39,668	0/0:24,0:23:36.12:0,36,613	0/0:21,0:21:32.73:0,33,566	0/0:19,0:18:39.08:0,39,636	0/0:27,0:27:63.21:0,63,1056	0/0:39,0:39:93.26:0,93,1509	0/0:5,0:5:12.04:0,12,206
chr10	35733321	.	GACAA	G	2664.74	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=11.120;DP=808;FS=2.458;HRun=0;HaplotypeScore=143.1639;InbreedingCoeff=0.9992;MQ=61.83;MQ0=0;MQRankSum=-1.503;QD=34.61;ReadPosRankSum=1.860;VQSLOD=4.0747;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,129,3190	0/0:18,0:18:45.13:0,45,1020	0/0:25,0:25:51.17:0,51,1126	0/0:16,0:16:25.32:0,25,505	0/0:34,0:33:87.77:0,88,2043	0/0:27,0:27:78.27:0,78,1932	0/0:27,0:27:72.20:0,72,1710	0/0:32,0:32:72.25:0,72,1845	0/0:22,0:22:60.17:0,60,1461	0/0:38,0:38:99:0,108,2736	0/0:17,0:17:42.11:0,42,972	1/1:1,23:22:51.17:900,51,0	0/0:41,0:41:99:0,111,2598	0/0:33,0:33:81.24:0,81,2019	0/0:52,0:52:99:0,141,3541	0/0:33,0:33:96.33:0,96,2330	0/0:34,0:34:84.24:0,84,2028	0/0:15,0:15:39.13:0,39,940	0/0:16,0:16:45.15:0,45,1101	0/0:29,0:29:84.29:0,84,2110	0/0:56,0:56:99:0,138,3540	0/0:20,0:20:54.18:0,54,1344	1/1:4,16:20:42.14:741,42,0	1/1:7,26:33:66.23:1166,66,0	0/0:15,0:15:39.12:0,39,949	0/0:31,0:31:75.26:0,75,1921	0/0:42,0:42:99:0,126,3077	0/0:10,0:10:30.10:0,30,770
chr10	35733911	.	TC	T	3401.21	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=8.220;DP=737;FS=0.402;HRun=2;HaplotypeScore=75.3923;InbreedingCoeff=0.9990;MQ=69.47;MQ0=0;MQRankSum=0.938;QD=29.58;ReadPosRankSum=2.521;VQSLOD=3.3296;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,135,1769	0/0:9,0:9:27.04:0,27,316	0/0:15,0:15:35.15:0,35,388	0/0:13,0:13:34.61:0,35,398	1/1:0,21:21:48.04:554,48,0	0/0:30,0:30:90.19:0,90,1107	0/0:22,0:22:50.61:0,51,796	0/0:33,0:33:93.24:0,93,1151	1/1:0,29:29:78.25:998,78,0	0/0:41,0:41:99:0,120,1420	0/0:17,0:17:48.08:0,48,582	0/0:33,0:32:90.22:0,90,1129	0/0:29,0:29:75.74:0,76,1053	0/0:21,0:21:60.10:0,60,743	0/0:50,0:50:99:0,135,1724	1/1:3,32:35:50.77:843,51,0	1/1:0,30:30:78.25:1007,78,0	0/0:27,0:27:78.20:0,78,998	0/0:22,0:22:63.09:0,63,716	0/0:30,0:30:84.98:0,85,1002	0/0:22,0:22:66.18:0,66,850	0/0:19,0:19:54.14:0,54,684	0/0:20,0:20:51.07:0,51,606	0/0:28,0:28:81.19:0,81,1019	0/0:22,0:22:66.15:0,66,840	0/0:30,0:30:87.14:0,87,1053	0/0:33,0:33:93.16:0,93,1165	0/0:8,0:8:24.05:0,24,293
chr10	35739558	.	A	AG	6061.45	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-9.532;DP=517;FS=0.881;HRun=0;HaplotypeScore=65.3409;InbreedingCoeff=0.9499;MQ=64.17;MQ0=8;MQRankSum=2.400;QD=20.27;ReadPosRankSum=4.198;VQSLOD=6.6094;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:73.49:0,73,795	1/1:0,10:10:14.72:161,15,0	0/0:38,0:16:28.61:0,29,229	0/0:26,0:9:5.07:0,5,99	0/0:34,0:34:67.01:0,67,458	1/1:0,16:17:30.02:325,30,0	1/1:1,9:10:13.28:149,13,0	1/1:6,15:19:34.25:356,34,0	0/0:10,0:10:12.81:0,13,125	1/1:1,24:25:59.08:599,59,0	1/1:3,10:13:30.55:271,31,0	0/0:7,0:7:17.87:0,18,135	1/1:7,3:10:27.01:268,27,0	1/1:0,8:9:11.88:123,12,0	1/1:0,23:23:42.12:502,42,0	0/0:18,0:18:17.85:0,18,135	0/0:31,0:31:26.54:0,27,172	1/1:13,13:25:19.06:545,19,0	1/1:6,19:22:50.51:552,51,0	1/1:0,14:15:41.90:425,42,0	1/1:1,8:9:27.06:305,27,0	1/1:1,5:6:7.65:69,8,0	0/0:13,0:13:23.70:0,24,164	0/0:13,0:13:32.14:0,32,239	1/1:1,12:13:20.97:254,21,0	1/1:3,13:17:37.94:385,38,0	1/1:3,28:31:41.46:481,41,0	1/1:3,15:16:24.07:291,24,0
chr10	35739854	.	C	CA	8416.89	PASS	AB=1.000;AC=42;AF=0.750;AN=56;BaseQRankSum=-7.964;DP=525;FS=5.722;HRun=10;HaplotypeScore=56.6011;InbreedingCoeff=0.7309;MQ=74.05;MQ0=2;MQRankSum=0.794;QD=21.47;ReadPosRankSum=2.829;VQSLOD=5.9348;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:95.28:0,95,968	1/1:0,8:8:18.06:226,18,0	0/1:40,0:20:35.14:35,0,111	0/0:15,0:8:6.79:0,7,22	0/0:22,0:22:56.93:0,57,542	1/1:0,25:25:57.18:716,57,0	1/1:3,16:19:42.12:516,42,0	1/1:1,26:27:75.20:910,75,0	0/0:16,0:16:42.05:0,42,408	1/1:2,20:22:63.13:737,63,0	1/1:2,27:29:60.08:709,60,0	1/1:15,0:15:7.72:105,8,0	1/1:4,7:11:12.04:151,12,0	1/1:2,8:10:6.02:75,6,0	1/1:0,21:21:39.12:491,39,0	0/0:18,0:18:51.11:0,51,520	0/0:25,0:25:72.16:0,72,733	1/1:6,25:31:44.30:552,44,0	1/1:2,14:16:42.06:469,42,0	1/1:2,14:16:39.07:447,39,0	1/1:0,10:10:21.07:264,21,0	1/1:1,7:8:21.05:247,21,0	0/1:7,0:7:9.52:34,0,10	1/1:13,0:13:2:67,2,0	1/1:3,14:17:27.09:338,27,0	1/1:1,16:17:48.13:573,48,0	1/1:2,14:16:27.09:339,27,0	1/1:0,14:13:33.11:415,33,0
chr10	35739860	.	A	AT	2833.11	PASS	AB=1.000;AC=36;AF=0.643;AN=56;BaseQRankSum=10.042;DP=522;FS=8.783;HRun=7;HaplotypeScore=74.1729;InbreedingCoeff=0.3672;MQ=73.94;MQ0=2;MQRankSum=-0.644;QD=7.19;ReadPosRankSum=5.386;VQSLOD=0.0065;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:96.09:0,96,910	0/1:9,0:9:17.47:61,0,17	0/1:39,0:20:6.23:6,0,84	0/0:14,0:6:5.34:0,5,29	0/0:22,0:22:50.98:0,51,475	1/1:27,0:27:11.79:215,12,0	1/1:17,0:17:21.15:148,21,0	1/1:27,0:27:21.69:217,22,0	0/0:14,0:14:33.05:0,33,318	1/1:22,0:22:40.94:172,41,0	0/1:29,0:29:27.17:173,0,27	1/1:1,14:15:33.10:398,33,0	0/1:13,0:13:25.67:26,0,118	1/1:9,0:9:5.60:25,6,0	1/1:22,0:22:34.99:144,35,0	0/0:18,0:18:51.08:0,51,492	0/0:25,0:25:75.06:0,75,708	0/1:27,0:27:1.06:121,0,1	1/1:17,0:17:27.28:119,27,0	1/1:15,0:15:10.32:110,10,0	0/1:12,0:12:24.13:63,0,24	1/1:8,0:8:15.54:80,16,0	1/1:1,6:7:15:164,15,0	1/1:3,11:14:27.04:309,27,0	0/1:17,0:17:35.85:105,0,36	0/1:18,0:18:6.69:123,0,7	1/1:15,0:15:3.30:91,3,0	1/1:14,0:13:31.12:152,31,0
chr10	35740282	.	CT	C	1145.64	PASS	AB=0.748;AC=28;AF=0.500;AN=56;BaseQRankSum=0.571;DP=524;FS=2.346;HRun=17;HaplotypeScore=65.7419;InbreedingCoeff=0.0466;MQ=72.82;MQ0=9;MQRankSum=1.634;QD=3.00;ReadPosRankSum=3.677;VQSLOD=-0.5927;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:28,2:30:2.06:2,0,239	0/0:3,0:3:2.99:0,3,24	0/0:28,1:17:0.24:0,0,54	0/1:21,0:15:0.28:0,0,0	0/0:9,1:22:37.16:0,37,211	0/1:10,5:16:5.48:60,0,5	1/1:4,7:12:19.22:106,19,0	0/1:13,19:33:9.49:207,0,9	0/0:5,0:13:11.77:0,12,79	1/1:11,6:18:0.83:70,1,0	1/1:9,15:24:27.67:159,28,0	0/0:14,3:16:13.23:0,13,185	0/1:5,6:12:3.36:51,0,3	0/1:3,4:8:12.53:28,0,13	1/1:9,8:18:13.53:72,14,0	0/0:10,1:28:21.03:0,21,113	0/0:20,0:29:61.76:0,62,386	1/1:8,9:17:19.41:106,19,0	0/1:17,2:19:42.19:42,0,48	0/1:10,7:18:4.72:67,0,5	1/1:13,3:16:10.78:56,11,0	0/1:7,4:11:13.11:24,0,13	0/1:13,2:16:9.40:9,0,98	0/1:15,4:19:0.90:1,0,78	0/1:11,12:23:44.73:45,0,53	1/1:11,9:22:0.18:86,0,0	0/1:7,9:17:23.10:79,0,23	0/1:4,5:9:9.94:38,0,10
chr10	35741662	.	CGAACGCGA	C	2199.13	PASS	AB=1.000;AC=37;AF=0.661;AN=56;BaseQRankSum=7.540;DP=402;FS=11.504;HRun=0;HaplotypeScore=122.1277;InbreedingCoeff=-0.1184;MQ=62.58;MQ0=6;MQRankSum=-3.196;QD=7.00;ReadPosRankSum=0.390;VQSLOD=1.7494;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:65.80:0,66,2373	1/1:7,0:7:11.77:66,12,0	0/0:20,0:11:24.55:0,25,799	0/0:40,0:17:18.85:0,19,977	1/1:17,0:17:33.71:228,34,0	0/1:12,0:12:35.62:57,0,36	0/1:16,0:16:15.68:80,0,16	0/1:25,0:25:99:251,0,149	0/1:18,0:18:20.55:21,0,110	0/1:13,0:13:84.48:97,0,84	1/1:4,0:4:2.90:16,3,0	1/1:0,11:11:24.08:506,24,0	1/1:11,0:11:24.34:151,24,0	0/1:9,0:9:14.58:15,0,38	0/1:13,0:13:4.40:65,0,4	0/1:18,0:18:36.41:45,0,36	0/1:20,0:20:43.70:87,0,44	1/1:14,0:14:1.92:25,2,0	0/1:17,0:17:91.56:92,0,155	1/1:8,0:8:6.85:43,7,0	0/1:20,0:20:39.06:89,0,39	1/1:10,0:9:14.98:85,15,0	1/1:0,3:3:3.01:47,3,0	1/1:1,13:14:3.01:35,3,0	0/1:9,0:9:19.85:20,0,33	0/1:11,0:10:26.94:121,0,27	1/1:6,0:6:5.05:36,5,0	1/1:8,0:8:15.71:91,16,0
chr10	35741666	.	CGCGA	C	8759.32	PASS	AB=0.771;AC=50;AF=0.893;AN=56;BaseQRankSum=5.647;DP=400;FS=18.713;HRun=0;HaplotypeScore=74.5938;InbreedingCoeff=0.5317;MQ=65.60;MQ0=6;MQRankSum=-6.565;QD=24.88;ReadPosRankSum=0.592;VQSLOD=2.5030;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:66.18:0,66,1607	1/1:0,7:7:15.05:261,15,0	0/0:20,0:11:17.43:0,17,439	0/1:42,0:19:2.61:3,0,619	1/1:3,14:17:30.06:457,30,0	1/1:1,10:11:18.06:313,18,0	1/1:4,11:15:27.09:462,27,0	1/1:3,21:24:57.20:993,57,0	1/1:2,12:14:12.04:206,12,0	1/1:4,9:13:10.44:452,10,0	1/1:0,7:7:3.01:48,3,0	1/1:11,0:11:24.08:365,24,0	1/1:2,9:11:27.09:466,27,0	1/1:1,7:8:8.77:157,9,0	1/1:0,14:14:24.08:403,24,0	1/1:4,10:14:36.12:619,36,0	1/1:6,13:19:21.07:361,21,0	1/1:2,13:15:21.03:335,21,0	1/1:3,15:18:42.10:692,42,0	1/1:1,7:8:12.01:171,12,0	1/1:6,14:20:30.05:507,30,0	1/1:1,11:11:18.06:303,18,0	1/1:3,0:3:3.01:47,3,0	1/1:14,0:14:3.01:35,3,0	1/1:2,7:9:9.03:154,9,0	0/1:2,11:12:9.28:435,0,9	1/1:0,5:5:12.04:198,12,0	1/1:1,7:8:18.06:315,18,0
chr10	35742567	.	T	TA	1191.10	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-6.437;DP=565;FS=1.282;HRun=8;HaplotypeScore=58.4752;InbreedingCoeff=0.9798;MQ=79.37;MQ0=2;MQRankSum=0.545;QD=20.19;ReadPosRankSum=2.922;VQSLOD=3.7617;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:72.02:0,72,658	0/0:14,0:14:41.98:0,42,376	0/0:28,0:23:32.74:0,33,273	0/0:18,0:13:15.79:0,16,139	0/0:28,0:28:71.99:0,72,648	0/0:18,0:18:42.01:0,42,384	0/0:24,0:24:65.98:0,66,588	0/0:22,0:22:51.01:0,51,460	0/0:12,0:12:29.81:0,30,260	0/0:19,0:19:39.01:0,39,353	0/0:19,0:19:44.99:0,45,407	1/1:1,14:15:33.07:371,33,0	0/0:17,0:17:42.01:0,42,384	0/0:19,0:19:51.01:0,51,462	0/0:23,0:23:54.01:0,54,494	0/0:29,0:29:66.02:0,66,603	0/0:17,0:17:45.02:0,45,411	0/0:19,0:19:48.02:0,48,439	0/0:22,0:22:57.91:0,58,523	0/0:24,0:24:60.03:0,60,548	0/0:9,0:9:27:0,27,242	0/0:20,0:20:57.02:0,57,517	1/1:6,19:25:17.04:454,17,0	1/1:2,17:19:36.07:508,36,0	0/0:21,0:21:60.03:0,60,549	0/0:28,0:28:66.02:0,66,604	0/0:20,0:20:56.79:0,57,494	0/0:5,0:5:12.01:0,12,110
chr10	35742657	.	CGAAAAAAA	C	1629.80	PASS	AB=0.947;AC=7;AF=0.130;AN=54;BaseQRankSum=3.986;DP=563;FS=3.559;HRun=0;HaplotypeScore=148.8959;InbreedingCoeff=0.7602;MQ=54.77;MQ0=23;MQRankSum=-6.175;QD=27.16;ReadPosRankSum=0.740;VQSLOD=3.0306;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:36:81.28:0,81,2814	0/0:7,0:7:12.04:0,12,189	0/0:20,0:1:3.01:0,3,86	./.	0/0:25,0:24:57.19:0,57,1889	0/0:19,0:19:39.13:0,39,1471	0/0:25,0:24:39.13:0,39,1442	0/0:19,0:17:39.13:0,39,1184	0/0:15,0:15:39.12:0,39,1251	0/0:17,0:16:42.14:0,42,1616	0/0:27,0:26:42.14:0,42,1435	1/1:8,3:11:27.07:517,27,0	0/0:21,0:21:39.60:0,40,1410	0/1:17,1:17:39.97:40,0,1075	0/0:19,0:19:42.14:0,42,1620	0/0:31,0:31:66.22:0,66,2363	0/0:40,0:40:99:0,103,3655	0/0:28,0:26:48.16:0,48,1698	0/0:13,0:10:12.04:0,12,403	0/0:22,0:22:45.14:0,45,1351	0/0:9,0:9:15.05:0,15,611	0/0:17,0:17:36.12:0,36,1355	1/1:11,11:22:42.13:885,42,0	1/1:5,4:9:15.04:332,15,0	0/0:19,0:19:45.15:0,45,1369	0/0:25,0:25:57.18:0,57,2015	0/0:20,0:19:33.11:0,33,1272	0/0:6,0:5:15.05:0,15,611
chr10	35742666	.	GA	G	354.67	PASS	AB=0.971;AC=7;AF=0.125;AN=56;BaseQRankSum=5.928;DP=575;FS=2.392;HRun=7;HaplotypeScore=84.1003;InbreedingCoeff=0.9072;MQ=54.48;MQ0=18;MQRankSum=-6.216;QD=4.93;ReadPosRankSum=1.181;VQSLOD=0.0122;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:34:87.28:0,87,1092	0/0:6,0:6:15.05:0,15,183	0/0:20,0:4:8.10:0,8,57	0/1:33,1:2:0:0,0,0	0/0:26,0:24:63.20:0,63,791	0/0:21,0:21:48.14:0,48,592	0/0:20,0:20:42.13:0,42,524	0/0:23,0:20:54.17:0,54,678	0/0:14,0:14:39.11:0,39,478	0/0:20,0:19:54.13:0,54,647	0/0:23,0:23:42.13:0,42,528	1/1:6,4:10:24.33:167,24,0	0/0:21,0:21:42.11:0,42,513	0/0:15,0:14:28.10:0,28,406	0/0:21,0:21:51.16:0,51,641	0/0:32,0:32:81.25:0,81,1006	0/0:41,1:42:99:0,111,1366	0/0:27,0:25:51.16:0,51,640	0/0:13,0:11:24.02:0,24,271	0/0:20,0:20:54.16:0,54,663	0/0:10,0:10:18.06:0,18,226	0/0:15,0:15:39.12:0,39,490	1/1:17,3:20:20.80:246,21,0	1/1:6,2:8:13.91:80,14,0	0/0:23,0:22:57.17:0,57,704	0/0:28,0:28:84.24:0,84,1024	0/0:19,0:19:45.14:0,45,565	0/0:8,0:7:21.05:0,21,250
chr10	35742691	.	GA	G	6606.79	PASS	AB=0.598;AC=47;AF=0.839;AN=56;BaseQRankSum=-5.704;DP=617;FS=17.454;HRun=11;HaplotypeScore=78.4072;InbreedingCoeff=0.5685;MQ=60.08;MQ0=24;MQRankSum=0.613;QD=14.36;ReadPosRankSum=2.630;VQSLOD=3.6799;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:35:62.82:0,63,338	1/1:0,5:5:6.88:51,7,0	0/0:59,0:16:32.25:0,32,250	0/0:62,0:9:6.94:0,7,53	1/1:2,0:19:36:104,36,0	1/1:8,12:20:26.66:221,27,0	1/1:0,13:14:38:301,38,0	1/1:6,17:23:55.76:437,56,0	1/1:5,0:9:9.96:29,10,0	1/1:5,17:22:50.93:419,51,0	0/1:4,9:13:7.43:168,0,7	1/1:2,6:8:23.96:195,24,0	1/1:2,15:17:35.94:295,36,0	1/1:3,16:19:41.83:336,42,0	1/1:2,17:20:18.03:343,18,0	1/1:3,0:32:58.94:199,59,0	1/1:9,0:42:60.31:174,60,0	1/1:2,20:22:41.95:345,42,0	1/1:5,14:19:22.23:272,22,0	0/1:3,11:15:14.72:235,0,15	1/1:2,12:14:23.97:197,24,0	1/1:1,15:16:29.17:305,29,0	1/1:4,15:19:33.53:346,34,0	1/1:2,8:10:26.73:204,27,0	1/1:2,16:17:43.99:351,44,0	1/1:2,28:30:54.93:653,55,0	1/1:3,14:17:38.95:320,39,0	0/1:5,6:10:12.46:105,0,12
chr10	35746128	.	C	CTGTGTG	1656.61	PASS	AB=1.000;AC=36;AF=0.818;AN=44;BaseQRankSum=-1.644;DP=460;FS=0.000;HRun=0;HaplotypeScore=120.6413;InbreedingCoeff=0.2870;MQ=63.25;MQ0=25;MQRankSum=-0.375;QD=5.62;ReadPosRankSum=-1.182;VQSLOD=1.7031;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:21,6:31:6.02:134,6,0	0/1:3,0:3:0:0,0,0	./.	./.	./.	1/1:14,0:13:3:82,3,0	0/0:23,0:23:0.40:0,0,0	1/1:25,0:24:26.56:357,27,0	1/1:17,0:17:8.86:86,9,0	1/1:16,0:15:10.79:171,11,0	./.	0/0:7,0:8:2.74:0,3,12	1/1:13,0:13:6.02:114,6,0	1/1:16,0:15:6.02:94,6,0	1/1:21,0:19:6.47:75,6,0	1/1:16,0:14:2.94:18,3,0	1/1:14,0:14:3.01:56,3,0	1/1:12,0:14:3.01:74,3,0	1/1:19,0:18:6.01:77,6,0	1/1:9,0:7:2.97:20,3,0	1/1:26,0:24:2.86:39,3,0	0/1:9,0:9:0:0,0,0	./.	0/0:17,0:18:2.68:0,3,42	./.	1/1:16,0:15:15.94:283,16,0	1/1:11,0:11:2.99:24,3,0	1/1:5,0:5:3.01:48,3,0
chr10	35746170	.	G	GCGCGCGCA	1231.43	PASS	AB=1.000;AC=26;AF=0.542;AN=48;BaseQRankSum=1.570;DP=313;FS=19.259;HRun=0;HaplotypeScore=98.4598;InbreedingCoeff=0.0576;MQ=64.88;MQ0=14;MQRankSum=-2.239;QD=7.60;ReadPosRankSum=4.578;VQSLOD=0.3201;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:30:29.31:0,29,740	1/1:5,0:5:8.83:70,9,0	0/0:27,0:12:21.11:0,21,810	0/0:35,0:14:21.12:0,21,367	./.	1/1:9,0:8:2.98:22,3,0	0/1:14,0:14:0.02:0,0,0	0/1:16,0:14:11.79:12,0,190	0/1:16,0:16:41.22:41,0,61	0/1:6,0:5:4.98:162,0,5	./.	1/1:5,0:4:5.60:28,6,0	1/1:10,0:10:5.82:79,6,0	0/0:12,0:11:11.99:0,12,126	0/0:13,0:11:5.99:0,6,50	1/1:11,0:9:1.66:5,2,0	1/1:9,0:9:14.64:335,15,0	0/1:7,0:7:42.06:60,0,42	0/1:11,0:10:79.68:108,0,80	0/1:8,0:6:13.99:21,0,14	0/1:9,0:8:24.86:25,0,25	1/1:5,0:5:2.59:31,3,0	./.	1/1:6,0:5:2.43:15,2,0	./.	0/1:10,0:9:52.51:285,0,53	0/0:11,0:11:6.84:0,7,38	0/1:5,0:5:10.19:82,0,10
chr10	35746171	.	T	TGCGCGCGC	3123.56	PASS	AB=0.825;AC=30;AF=0.625;AN=48;BaseQRankSum=-3.489;DP=331;FS=3.387;HRun=0;HaplotypeScore=96.2750;InbreedingCoeff=0.3210;MQ=63.91;MQ0=13;MQRankSum=-3.482;QD=16.88;ReadPosRankSum=3.519;VQSLOD=2.2760;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:25.37:0,25,673	1/1:5,0:5:9.03:202,9,0	0/0:26,0:12:36.07:0,36,839	0/0:35,0:14:21.41:0,21,390	./.	1/1:7,1:7:2.76:67,3,0	0/1:4,11:19:0:0,0,0	0/1:16,0:14:26.99:262,0,27	0/1:10,0:17:13.90:63,0,14	1/1:2,4:6:9.48:318,9,0	./.	0/0:8,0:7:1.25:0,1,3	1/1:3,8:11:5.73:171,6,0	0/0:7,5:12:5.37:0,5,33	0/1:8,4:13:0:0,0,0	1/1:9,0:11:1.55:5,2,0	1/1:5,0:9:14.85:460,15,0	1/1:4,1:5:9.01:205,9,0	0/1:12,0:11:20.77:346,0,21	1/1:7,0:5:3.01:72,3,0	0/1:9,0:8:6.87:71,0,7	1/1:2,2:4:2.59:80,3,0	./.	0/0:8,0:7:0.89:0,1,2	./.	1/1:6,5:11:8.24:620,8,0	1/1:3,8:11:5.40:40,5,0	1/1:5,0:5:11.99:287,12,0
chr10	35746249	.	CCCCTCT	C	505.03	PASS	AB=1.000;AC=11;AF=0.212;AN=52;BaseQRankSum=3.002;DP=198;FS=3.011;HRun=0;HaplotypeScore=53.5814;InbreedingCoeff=0.4433;MQ=67.68;MQ0=0;MQRankSum=-0.628;QD=5.94;ReadPosRankSum=0.835;VQSLOD=1.5074;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:18:47.94:0,48,531	0/1:3,0:3:2.21:2,0,14	0/1:23,0:11:28.86:29,0,77	0/1:22,0:9:17.07:17,0,19	1/1:1,12:13:6.02:65,6,0	0/0:5,0:5:11.95:0,12,123	0/0:8,0:8:14.88:0,15,113	0/0:6,0:5:15.05:0,15,224	1/1:4,0:4:5.94:41,6,0	0/0:9,0:9:20.02:0,20,218	0/0:3,0:3:3.01:0,3,43	0/0:5,0:5:12.04:0,12,153	0/0:6,0:6:8.97:0,9,86	0/0:7,0:7:15.91:0,16,187	0/0:3,0:3:5.97:0,6,47	1/1:13,2:15:35.87:397,36,0	1/1:5,0:4:11.95:102,12,0	0/0:3,0:3:6.46:0,6,64	./.	0/0:2,0:2:3.01:0,3,42	0/0:1,0:1:2.97:0,3,20	0/0:3,0:3:8.96:0,9,98	0/0:9,0:9:17.69:0,18,167	0/0:4,0:4:5.97:0,6,58	0/0:4,0:4:11.66:0,12,87	0/0:10,0:10:24.06:0,24,322	0/0:5,0:5:9.01:0,9,117	./.
chr10	35753239	.	CT	C	3152.53	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.690;DP=825;FS=0.887;HRun=1;HaplotypeScore=81.0071;InbreedingCoeff=0.9890;MQ=81.65;MQ0=0;MQRankSum=-1.167;QD=36.24;ReadPosRankSum=3.396;VQSLOD=4.0021;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,150,2336	0/0:14,0:14:42.12:0,42,624	0/0:26,0:26:71.38:0,71,1100	0/0:20,0:20:57.12:0,57,854	0/0:26,0:26:75.24:0,75,1172	0/0:22,0:22:63.21:0,63,1003	0/0:40,0:40:99:0,120,1888	0/0:30,0:30:90.27:0,90,1319	0/0:40,0:40:99:0,120,1809	0/0:34,0:34:99:0,102,1578	0/0:18,0:18:54.16:0,54,808	1/1:0,40:40:99:1546,111,0	0/0:35,0:35:99:0,105,1504	0/0:32,0:32:96.27:0,96,1414	0/0:39,0:39:99:0,117,1758	0/0:44,0:44:99:0,132,1945	0/0:36,0:36:99:0,108,1698	0/0:12,0:12:36.11:0,36,542	0/0:29,0:29:85.83:0,86,1238	0/0:16,0:16:48.16:0,48,767	0/0:52,0:52:99:0,153,2350	0/0:24,0:24:66.23:0,66,1052	1/1:1,18:19:51.12:690,51,0	1/1:0,28:28:78.09:1060,78,0	0/0:22,0:22:66.19:0,66,983	0/0:38,0:38:99:0,114,1756	0/0:33,0:33:99:0,99,1470	0/0:4,0:4:12:0,12,143
chr10	35753447	.	TGACAG	T	17202.27	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-7.300;DP=887;FS=2.187;HRun=0;HaplotypeScore=218.5623;InbreedingCoeff=0.9493;MQ=85.34;MQ0=8;MQRankSum=-0.301;QD=27.18;ReadPosRankSum=7.455;VQSLOD=4.1896;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:39:39.12:454,39,0	1/1:3,8:11:20.77:384,21,0	0/0:69,0:50:51.91:0,52,911	0/0:85,0:55:21.15:0,21,755	1/1:12,11:23:27.09:496,27,0	1/1:9,15:24:39.13:717,39,0	1/1:14,20:34:39.13:716,39,0	1/1:18,5:23:12.03:176,12,0	1/1:9,10:19:33.11:606,33,0	1/1:15,16:31:45.15:819,45,0	1/1:6,5:11:6.02:110,6,0	0/0:17,0:39:69:0,69,1326	1/1:15,25:40:65.76:1213,66,0	1/1:5,22:27:57.20:1047,57,0	1/1:5,26:31:69.24:1269,69,0	1/1:7,30:37:69.24:1268,69,0	1/1:18,38:56:99:1931,105,0	1/1:9,24:33:63.22:1157,63,0	1/1:13,8:21:21.06:357,21,0	1/1:9,8:17:18.06:331,18,0	1/1:24,26:50:60.21:1103,60,0	1/1:14,13:27:38.11:678,38,0	0/0:11,0:21:21.07:0,21,461	0/0:30,0:39:21.41:0,21,320	1/1:6,11:17:27.09:496,27,0	1/1:11,13:24:39.13:714,39,0	1/1:10,23:33:54.06:993,54,0	1/1:2,3:5:9.03:165,9,0
chr10	35756065	.	ACCG	A	6440.45	PASS	AB=1.000;AC=45;AF=0.804;AN=56;BaseQRankSum=-0.975;DP=426;FS=3.424;HRun=0;HaplotypeScore=81.5806;InbreedingCoeff=0.3925;MQ=60.82;MQ0=7;MQRankSum=2.417;QD=17.04;ReadPosRankSum=1.734;VQSLOD=4.4458;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:24.02:0,24,355	1/1:3,0:3:8.99:75,9,0	0/0:17,0:10:17.92:0,18,139	0/0:22,0:18:41.79:0,42,351	1/1:10,0:10:9.37:158,9,0	1/1:0,12:12:3.01:51,3,0	1/1:1,19:20:12.04:181,12,0	1/1:22,0:20:50.93:446,51,0	0/1:17,0:17:34.43:113,0,34	1/1:1,6:7:17.88:163,18,0	1/1:0,9:9:17.98:272,18,0	0/1:11,0:10:12.18:80,0,12	1/1:3,20:22:35.91:586,36,0	1/1:2,30:31:35.35:560,35,0	1/1:1,19:20:33.11:557,33,0	0/1:17,0:17:4.19:205,0,4	1/1:11,0:11:8.33:158,8,0	1/1:2,27:29:33.07:529,33,0	1/1:1,8:9:23.90:213,24,0	1/1:1,7:7:17.68:140,18,0	1/1:2,39:40:39.07:621,39,0	1/1:1,8:9:8.95:116,9,0	0/1:6,0:5:8.88:40,0,9	0/1:19,0:19:10.95:110,0,11	1/1:1,11:12:18.06:306,18,0	1/1:0,15:15:40.37:492,40,0	1/1:0,11:11:9.03:152,9,0	1/1:5,0:5:14.94:115,15,0
chr10	35756093	.	C	CCACCAA	4349.34	PASS	AB=0.972;AC=34;AF=0.630;AN=54;BaseQRankSum=-10.302;DP=430;FS=26.808;HRun=0;HaplotypeScore=118.9072;InbreedingCoeff=-0.3025;MQ=58.98;MQ0=16;MQRankSum=-0.750;QD=10.93;ReadPosRankSum=-7.594;VQSLOD=-0.2419;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:29.90:0,30,343	0/1:3,0:3:13.02:37,0,13	./.	0/0:12,0:7:6.43:0,6,49	1/1:0,8:10:20.77:221,21,0	1/1:18,0:18:5.04:128,5,0	1/1:25,0:25:45.41:370,45,0	1/1:11,0:9:23.53:186,24,0	1/1:3,8:11:9.01:290,9,0	0/1:11,0:10:11.08:124,0,11	0/1:12,0:12:39.67:97,0,40	0/1:2,0:11:15.42:170,0,15	0/1:27,0:26:99:238,0,127	0/1:27,0:26:46.85:47,0,139	0/1:24,0:24:99:117,0,116	1/1:0,10:13:9.03:284,9,0	1/1:12,0:13:29.86:355,30,0	0/1:27,0:26:99:153,0,121	0/1:10,0:9:6.38:43,0,6	0/1:12,0:12:7.58:134,0,8	0/1:47,0:46:56.43:448,0,56	0/1:8,0:8:25.53:28,0,26	1/1:1,0:9:2.37:16,2,0	1/1:19,1:20:22.33:524,22,0	0/1:11,0:11:25.71:125,0,26	0/1:21,0:19:99:116,0,117	0/1:12,0:12:24.27:84,0,24	0/1:4,0:4:14.01:14,0,16
chr10	35756781	.	G	GTTGTT	23072.25	PASS	AB=1.000;AC=49;AF=0.875;AN=56;BaseQRankSum=4.889;DP=672;FS=2.021;HRun=0;HaplotypeScore=206.9412;InbreedingCoeff=0.8738;MQ=48.01;MQ0=11;MQRankSum=-8.284;QD=41.95;ReadPosRankSum=1.186;VQSLOD=4.5806;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,121,2366	1/1:5,1:7:20.42:372,20,0	0/0:35,0:19:45.30:0,45,661	0/0:39,0:16:34.98:0,35,494	1/1:4,0:20:41.89:685,42,0	1/1:8,8:21:60.02:1336,60,0	1/1:15,5:17:51.57:877,52,0	1/1:30,6:32:69.98:1212,70,0	1/1:12,0:18:42.48:493,42,0	1/1:13,7:21:60.19:1258,60,0	1/1:11,3:14:42.13:785,42,0	1/1:26,0:24:34.99:520,35,0	1/1:12,10:21:58.06:1290,58,0	1/1:13,5:21:50.45:1087,50,0	1/1:17,10:28:70.75:1572,71,0	1/1:12,0:32:56.11:862,56,0	1/1:5,0:20:35.45:614,35,0	1/1:7,4:12:28.37:512,28,0	1/1:22,2:25:38.23:730,38,0	1/1:16,8:23:42.73:1110,43,0	1/1:13,4:17:44.87:841,45,0	1/1:12,8:20:41.84:936,42,0	0/1:21,0:21:4.27:406,0,4	1/1:21,0:21:28.73:368,29,0	1/1:14,11:25:74.53:1543,75,0	1/1:16,14:29:81.57:1640,82,0	1/1:16,12:31:57.28:1650,57,0	1/1:5,2:7:20.88:374,21,0
chr10	35756782	.	T	TTG	11677.16	PASS	AB=0.942;AC=40;AF=0.714;AN=56;BaseQRankSum=0.314;DP=674;FS=4.282;HRun=0;HaplotypeScore=209.6311;InbreedingCoeff=0.1244;MQ=48.71;MQ0=11;MQRankSum=-5.121;QD=21.27;ReadPosRankSum=7.772;VQSLOD=4.4644;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,128,1814	1/1:4,3:7:8.22:223,8,0	0/0:37,0:20:47.45:0,47,564	0/0:41,0:17:35.36:0,35,429	1/1:21,0:20:34.91:352,35,0	1/1:20,1:21:48.12:612,48,0	1/1:20,2:17:10:454,10,0	1/1:17,21:32:40.67:911,41,0	0/1:18,0:18:6.99:184,0,7	1/1:15,6:21:59.71:741,60,0	1/1:8,7:15:40.32:536,40,0	0/1:26,0:24:4.68:228,0,5	1/1:21,2:22:12.52:604,13,0	1/1:17,3:20:8.21:502,8,0	1/1:24,5:29:5.70:734,6,0	0/1:33,0:30:12.59:328,0,13	0/1:21,0:20:1.32:256,0,1	0/1:11,1:12:27.08:172,0,27	1/1:22,3:25:2.62:425,3,0	0/1:19,4:22:18.57:588,0,19	1/1:11,6:17:42.89:567,43,0	1/1:19,1:19:3.54:393,4,0	0/1:21,0:21:44.05:200,0,44	0/1:20,0:20:24.11:181,0,24	1/1:20,6:25:46.20:800,46,0	1/1:28,2:29:34.73:757,35,0	0/1:28,5:33:25.62:764,0,26	0/1:5,2:7:2.71:166,0,3
chr10	35756788	.	TG	T	4522.43	PASS	AB=1.000;AC=48;AF=0.857;AN=56;BaseQRankSum=8.912;DP=661;FS=4.631;HRun=1;HaplotypeScore=216.0125;InbreedingCoeff=0.6689;MQ=44.76;MQ0=13;MQRankSum=-6.010;QD=8.48;ReadPosRankSum=2.224;VQSLOD=2.5645;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:93.36:0,93,1554	1/1:7,0:7:18.77:98,19,0	0/0:40,1:17:41.66:0,42,472	0/0:42,0:15:28.25:0,28,297	1/1:17,2:18:30.26:121,30,0	1/1:20,1:21:29.96:150,30,0	1/1:20,1:16:28.19:156,28,0	1/1:34,0:28:37.66:241,38,0	1/1:16,0:16:31.73:163,32,0	1/1:20,0:20:41.60:186,42,0	1/1:15,0:15:32.03:173,32,0	1/1:21,4:25:65.78:461,66,0	1/1:21,1:21:35.61:171,36,0	1/1:19,1:20:22.96:148,23,0	1/1:28,0:28:42.55:209,43,0	1/1:30,3:30:47.07:201,47,0	1/1:20,0:19:5.65:68,6,0	0/1:13,0:13:7.48:58,0,7	1/1:19,2:21:48.24:314,48,0	1/1:22,1:22:2.97:122,3,0	1/1:14,1:15:34.52:171,35,0	1/1:18,2:19:12.58:92,13,0	1/1:15,4:19:44.22:272,44,0	1/1:20,1:22:42.99:318,43,0	1/1:29,0:28:47.15:249,47,0	1/1:29,0:28:39.48:160,39,0	1/1:32,0:32:2.73:180,3,0	0/1:7,0:7:0.51:40,0,1
chr10	35756789	.	G	GT	9711.09	PASS	AB=1.000;AC=47;AF=0.839;AN=56;BaseQRankSum=4.736;DP=675;FS=1.966;HRun=7;HaplotypeScore=206.7797;InbreedingCoeff=0.5773;MQ=43.97;MQ0=15;MQRankSum=-7.983;QD=17.69;ReadPosRankSum=-0.465;VQSLOD=2.4034;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,1:42:78.94:0,79,1300	1/1:5,3:8:23.62:237,24,0	0/0:41,0:17:43.75:0,44,436	0/0:42,0:15:2:0,2,179	1/1:19,0:18:34.67:247,35,0	1/1:6,15:21:47.38:594,47,0	1/1:7,15:17:41.58:459,42,0	1/1:19,16:29:56.76:459,57,0	1/1:16,0:16:9.50:182,9,0	1/1:9,12:21:54.06:503,54,0	1/1:10,6:16:40.44:319,40,0	0/1:28,0:26:56.90:57,0,66	1/1:10,12:21:50.27:555,50,0	1/1:8,10:20:51.99:463,52,0	1/1:16,13:29:58.67:624,59,0	1/1:34,0:31:47.93:350,48,0	1/1:20,0:19:22.06:210,22,0	1/1:6,8:14:20.02:262,20,0	1/1:10,12:21:48.82:456,49,0	1/1:15,12:26:18.50:485,18,0	1/1:9,7:16:30.02:287,30,0	1/1:8,13:20:36.48:397,36,0	0/1:19,0:19:35.07:35,0,99	0/1:21,0:21:3.27:3,0,58	1/1:9,19:27:70.86:693,71,0	1/1:8,21:28:69.63:819,70,0	1/1:13,21:34:58.85:877,59,0	1/1:3,4:7:18.98:136,19,0
chr10	35756800	.	TGTTTTG	T	687.42	PASS	AB=0.956;AC=6;AF=0.107;AN=56;BaseQRankSum=-4.411;DP=681;FS=1.675;HRun=0;HaplotypeScore=269.6392;InbreedingCoeff=0.2945;MQ=42.92;MQ0=17;MQRankSum=-2.385;QD=7.39;ReadPosRankSum=-4.613;VQSLOD=1.1117;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,105,2735	0/0:9,0:9:22.35:0,22,353	0/0:48,0:17:29.07:0,29,718	0/0:43,0:14:25.36:0,25,517	0/0:24,0:22:23.97:0,24,602	0/0:20,0:20:55.54:0,56,1055	0/0:22,0:17:44.03:0,44,672	0/0:40,0:34:37.04:0,37,504	0/0:15,0:16:21.17:0,21,457	0/0:22,0:22:10.31:0,10,852	0/0:16,0:16:30.62:0,31,469	0/1:24,0:24:85.21:226,0,85	0/0:21,0:20:34.30:0,34,586	0/0:19,0:19:6.56:0,7,847	0/0:34,0:34:20.73:0,21,784	0/0:34,0:31:49:0,49,1095	0/0:17,0:16:39.74:0,40,673	0/1:14,0:14:3.16:3,0,548	0/0:18,0:15:30.92:0,31,496	0/0:30,0:29:53.34:0,53,943	0/1:14,0:14:0.09:0,0,238	0/0:19,0:18:32.56:0,33,695	0/1:15,0:17:45.52:237,0,46	1/1:12,9:22:30.51:338,31,0	0/0:30,0:29:63.41:0,63,898	0/0:28,0:27:76.94:0,77,1371	0/0:33,0:33:89.50:0,90,1510	0/0:6,0:6:17.64:0,18,287
chr10	35756807	.	G	GT	543.57	PASS	AB=0.889;AC=25;AF=0.446;AN=56;BaseQRankSum=0.630;DP=648;FS=63.333;HRun=0;HaplotypeScore=202.0376;InbreedingCoeff=-0.1382;MQ=45.40;MQ0=16;MQRankSum=-1.198;QD=1.25;ReadPosRankSum=4.371;VQSLOD=0.6202;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,101,1285	0/1:6,4:10:25.05:25,0,30	0/0:48,0:12:29.30:0,29,301	0/1:44,0:14:1.70:2,0,149	0/1:25,0:26:4.32:34,0,4	0/0:16,1:18:1.52:0,2,33	0/1:15,5:16:6.69:37,0,7	1/1:26,2:26:1.52:61,2,0	1/1:16,0:16:3.50:40,3,0	0/1:24,1:25:6.04:43,0,6	0/1:11,3:16:5.93:39,0,6	0/0:25,0:24:30.92:0,31,131	1/1:16,2:19:10.42:65,10,0	0/1:16,2:18:7.77:51,0,8	0/1:27,4:32:28.49:28,0,71	0/1:30,0:30:12.84:46,0,13	0/0:13,0:13:3.45:0,3,12	0/1:11,2:15:35.25:37,0,35	0/1:14,1:12:16.17:16,0,29	0/1:23,3:26:30.28:30,0,41	1/1:8,2:10:0.04:35,0,0	0/1:20,1:20:7.54:8,0,27	0/0:12,0:14:12.93:0,13,36	0/0:19,0:23:22.61:0,23,84	0/1:18,1:21:13.28:13,0,17	0/1:27,2:29:5.36:46,0,5	0/0:28,6:34:1.87:0,2,74	1/1:2,2:4:4.86:41,5,0
chr10	35756808	.	GT	G	48.51	PASS	AB=0.873;AC=4;AF=0.071;AN=56;BaseQRankSum=-0.279;DP=660;FS=15.138;HRun=17;HaplotypeScore=203.6805;InbreedingCoeff=0.2839;MQ=46.42;MQ0=16;MQRankSum=2.586;QD=0.64;ReadPosRankSum=3.315;VQSLOD=-0.5408;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:26,6:36:4.27:92,0,4	0/0:10,0:10:26.35:0,26,168	0/0:50,0:13:0.79:0,1,17	0/0:44,0:14:7.01:0,7,41	0/0:29,0:27:37.35:0,37,192	0/0:19,0:19:1.71:0,2,101	0/0:21,0:16:14.86:0,15,109	0/0:29,0:26:40.46:0,40,231	0/0:16,0:16:34.34:0,34,185	0/0:26,0:26:37.17:0,37,210	0/0:16,0:16:18.15:0,18,158	0/1:25,1:25:11.05:34,0,11	0/0:20,0:19:40.59:0,41,231	0/0:18,0:18:35.09:0,35,212	0/0:32,0:32:24.38:0,24,265	0/0:33,0:30:33.93:0,34,251	0/0:17,0:16:26.27:0,26,157	0/0:15,0:15:8.16:0,8,119	0/0:15,0:12:8.80:0,9,105	0/0:28,0:27:36.83:0,37,225	0/0:10,0:10:9.11:0,9,48	0/0:21,0:20:35.49:0,35,236	1/1:14,0:14:7.32:28,7,0	0/0:23,0:23:0.10:0,0,62	0/0:22,0:21:3.24:0,3,108	0/0:29,0:29:41.75:0,42,311	0/0:35,0:35:31.28:0,31,255	0/0:5,0:5:11.61:0,12,68
chr10	35758827	.	T	TA	5603.19	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-3.613;DP=574;FS=9.009;HRun=14;HaplotypeScore=77.3271;InbreedingCoeff=0.8428;MQ=64.56;MQ0=3;MQRankSum=-1.104;QD=12.29;ReadPosRankSum=-0.189;VQSLOD=4.2154;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:70.85:0,71,458	1/1:2,5:7:9:79,9,0	0/0:22,0:12:11.18:0,11,66	0/0:20,0:13:22.12:0,22,131	1/1:7,1:23:34.58:190,35,0	1/1:5,13:18:32.99:290,33,0	1/1:7,12:19:4.88:279,5,0	1/1:14,23:37:31.32:481,31,0	1/1:4,1:11:11.52:69,12,0	1/1:15,7:25:19.09:247,19,0	1/1:9,10:19:7.64:177,8,0	0/0:14,2:16:6.14:0,6,166	1/1:3,13:16:26.73:237,27,0	1/1:5,14:18:16.57:258,17,0	1/1:4,16:22:41.67:345,42,0	1/1:7,2:26:37.25:208,37,0	1/1:4,6:30:69.33:420,69,0	1/1:5,18:23:46.48:417,46,0	1/1:11,10:24:32.74:268,33,0	1/1:8,8:20:29.51:225,30,0	1/1:3,14:17:35.66:298,36,0	1/1:0,7:7:18:158,18,0	0/0:9,0:9:20.66:0,21,133	0/0:21,0:21:50.22:0,50,326	1/1:4,7:12:14.83:117,15,0	1/1:9,13:22:3.32:263,3,0	1/1:9,17:27:3.39:243,3,0	1/1:10,18:28:38.92:334,39,0
chr10	35761506	.	GAT	G	6621.92	PASS	AB=0.941;AC=47;AF=0.839;AN=56;BaseQRankSum=1.734;DP=463;FS=4.804;HRun=0;HaplotypeScore=86.6327;InbreedingCoeff=0.5835;MQ=72.11;MQ0=1;MQRankSum=0.103;QD=16.64;ReadPosRankSum=0.747;VQSLOD=4.1648;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:21,1:24:24.06:24,0,260	1/1:9,1:10:18:175,18,0	1/1:8,0:8:0.47:1,0,0	0/1:13,1:10:1.64:8,0,2	0/0:31,0:31:42.14:0,42,682	1/1:17,2:19:38.34:350,38,0	1/1:8,4:12:27.06:332,27,0	1/1:16,8:27:59.61:646,60,0	0/1:9,0:9:12.22:12,0,135	1/1:14,5:19:30.09:357,30,0	1/1:15,2:18:25.29:286,25,0	1/1:8,4:12:12.01:132,12,0	1/1:12,2:15:12.78:207,13,0	1/1:11,3:14:5.29:301,5,0	1/1:14,4:19:23.66:274,24,0	0/0:20,0:20:30.31:0,30,451	0/0:14,0:14:21.07:0,21,338	1/1:17,2:19:21.91:420,22,0	1/1:13,4:17:11.46:380,11,0	1/1:9,4:13:8.81:237,9,0	1/1:8,9:17:18.06:221,18,0	1/1:15,0:15:30.07:335,30,0	1/1:13,1:15:23.67:249,24,0	1/1:5,2:7:9.01:98,9,0	1/1:22,3:25:56.33:548,56,0	1/1:12,2:14:21.24:297,21,0	1/1:12,6:18:30.06:339,30,0	1/1:17,1:18:38.54:393,39,0
chr10	35761529	.	A	ATGTG	2227.26	PASS	AB=0.994;AC=39;AF=0.722;AN=54;BaseQRankSum=0.819;DP=435;FS=2.869;HRun=0;HaplotypeScore=129.2904;InbreedingCoeff=-0.1058;MQ=51.94;MQ0=7;MQRankSum=-0.133;QD=5.39;ReadPosRankSum=-2.169;VQSLOD=2.4222;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:18.03:0,18,236	1/1:8,0:8:5.10:17,5,0	./.	0/0:9,0:1:3.01:0,3,44	1/1:21,0:26:6.41:44,6,0	0/1:20,0:20:9.87:54,0,10	1/1:16,0:16:13.78:62,14,0	1/1:40,0:39:9.03:140,9,0	1/1:4,0:6:3.01:35,3,0	0/1:16,0:16:34.72:35,0,75	0/1:13,0:13:14.90:37,0,15	1/1:6,0:13:7.84:78,8,0	0/1:14,0:14:23.63:24,0,76	0/1:20,0:19:14.84:15,0,95	0/1:20,0:20:17.26:17,0,27	1/1:10,0:15:14.38:160,14,0	1/1:12,0:13:9.01:128,9,0	0/1:19,0:19:42.76:43,0,43	1/1:13,2:14:17.95:276,18,0	1/1:12,4:16:8.01:324,8,0	1/1:8,2:10:11.78:211,12,0	0/1:12,0:13:8.13:8,0,33	1/1:14,0:14:6.49:94,6,0	1/1:2,0:5:0.89:2,1,0	0/1:19,0:19:35.19:35,0,88	0/1:18,0:18:25.18:53,0,25	1/1:13,6:19:23.19:425,23,0	0/1:22,0:22:66.10:66,0,79
chr10	35761598	.	T	TA	5081.34	PASS	AB=0.779;AC=44;AF=0.815;AN=54;BaseQRankSum=-2.718;DP=403;FS=1.254;HRun=12;HaplotypeScore=68.9321;InbreedingCoeff=0.7244;MQ=66.16;MQ0=2;MQRankSum=-0.480;QD=15.08;ReadPosRankSum=-1.548;VQSLOD=5.1970;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:16:37.78:0,38,268	1/1:3,4:7:12.02:117,12,0	0/0:21,0:12:19.46:0,19,109	0/1:10,0:4:4.20:7,0,4	1/1:6,0:15:29.91:148,30,0	1/1:8,8:18:35.71:311,36,0	1/1:7,1:9:11.84:97,12,0	1/1:12,9:21:16.25:294,16,0	1/1:3,1:7:17.36:109,17,0	1/1:10,11:21:36.05:347,36,0	1/1:5,20:26:16.11:463,16,0	0/0:14,0:14:26.82:0,27,197	1/1:6,3:10:11.86:102,12,0	1/1:4,10:15:24.75:215,25,0	1/1:8,7:16:26.87:243,27,0	1/1:8,0:15:31.69:183,32,0	1/1:2,1:8:17.21:100,17,0	1/1:3,13:17:23.57:369,24,0	1/1:3,15:18:26.17:416,26,0	1/1:7,7:14:8.97:229,9,0	1/1:0,1:1:3:29,3,0	1/1:3,9:12:5.02:187,5,0	0/0:13,0:13:29.72:0,30,217	./.	0/1:4,13:19:2.08:278,0,2	1/1:5,18:23:48.08:467,48,0	1/1:12,6:18:11.02:246,11,0	1/1:9,6:16:14.84:124,15,0
chr10	35761672	.	G	GGGGGGC	19232.53	PASS	AB=1.000;AC=51;AF=0.911;AN=56;BaseQRankSum=-4.744;DP=383;FS=21.372;HRun=0;HaplotypeScore=88.7970;InbreedingCoeff=0.7115;MQ=72.20;MQ0=1;MQRankSum=-9.273;QD=55.75;ReadPosRankSum=-0.152;VQSLOD=2.9149;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:75.26:0,75,1609	1/1:2,3:5:12.04:404,12,0	0/0:11,0:11:28.74:0,29,455	0/1:15,0:15:13.88:14,0,610	1/1:1,10:11:9.03:303,9,0	1/1:3,7:10:24.08:676,24,0	1/1:4,8:14:15.05:424,15,0	1/1:8,9:17:27.09:869,27,0	1/1:4,10:14:30.10:991,30,0	1/1:3,15:18:42.14:1408,42,0	1/1:7,9:17:24.05:782,24,0	1/1:5,10:17:30.10:1006,30,0	1/1:7,8:15:42.14:1297,42,0	1/1:3,4:7:18.06:569,18,0	1/1:8,10:19:33.05:1021,33,0	1/1:8,12:21:35.82:1157,36,0	1/1:10,7:18:33.11:1057,33,0	1/1:9,4:13:21.01:501,21,0	1/1:3,6:9:21.07:706,21,0	1/1:2,8:11:24.08:711,24,0	1/1:4,6:10:12.47:269,12,0	1/1:7,3:10:18.02:522,18,0	1/1:4,10:15:21.07:636,21,0	1/1:2,4:6:15.05:425,15,0	1/1:8,9:17:39.13:1087,39,0	1/1:13,9:22:39.13:1296,39,0	1/1:1,8:9:24.08:807,24,0	1/1:2,2:4:9.03:295,9,0
chr10	35763266	.	T	TACTAAGACTGAGATTCCTCAC	10313.65	PASS	AB=0.771;AC=50;AF=0.962;AN=52;BaseQRankSum=-0.365;DP=80;FS=0.000;HRun=0;HaplotypeScore=115.3573;InbreedingCoeff=-0.1524;MQ=92.73;MQ0=0;MQRankSum=-0.261;QD=128.92;ReadPosRankSum=0.643;VQSLOD=4.3415;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,0:3:6.02:273,6,0	1/1:1,0:1:3.01:264,3,0	1/1:1,0:3:9.03:306,9,0	0/1:3,1:6:27.10:836,0,27	1/1:1,0:1:3.01:232,3,0	1/1:2,0:2:6.02:470,6,0	1/1:1,0:1:3.01:47,3,0	1/1:2,0:2:6.01:82,6,0	1/1:1,0:1:3.01:271,3,0	1/1:6,0:6:14.99:258,15,0	1/1:1,0:1:3:25,3,0	1/1:8,0:8:23.76:806,24,0	1/1:3,0:3:6.02:345,6,0	0/1:6,0:7:10.58:1315,0,11	1/1:3,0:3:9.03:756,9,0	1/1:7,0:7:21.07:1338,21,0	1/1:2,0:2:6:251,6,0	./.	1/1:3,0:4:12.04:532,12,0	1/1:2,0:2:3.01:230,3,0	1/1:3,0:3:3.01:192,3,0	1/1:2,0:2:6.01:73,6,0	1/1:1,0:1:3.01:45,3,0	1/1:3,0:3:6.02:487,6,0	1/1:3,0:3:6.02:498,6,0	1/1:1,0:1:3.01:66,3,0	1/1:4,0:4:12.03:318,12,0	./.
chr10	35763342	.	TAC	T	3463.57	PASS	AB=0.687;AC=37;AF=0.740;AN=50;BaseQRankSum=-2.336;DP=542;FS=0.649;HRun=0;HaplotypeScore=221.4713;InbreedingCoeff=0.5523;MQ=49.03;MQ0=15;MQRankSum=0.292;QD=10.13;ReadPosRankSum=0.832;VQSLOD=3.2239;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:35:41.59:0,42,596	1/1:2,4:6:5.98:53,6,0	./.	./.	0/0:15,0:17:2.16:0,2,20	1/1:11,9:21:33.50:343,33,0	0/1:8,9:18:12.54:254,0,13	1/1:26,2:30:0.67:206,1,0	0/0:19,0:20:16.73:0,17,120	1/1:12,9:21:27.07:299,27,0	1/1:4,6:10:9.02:94,9,0	1/1:14,0:20:14:75,14,0	0/1:5,8:14:21.39:188,0,21	1/1:12,8:20:26.74:297,27,0	1/1:15,10:28:44.31:400,44,0	0/0:31,0:35:32.09:0,32,211	0/0:18,0:18:23.58:0,24,159	1/1:6,10:16:27.01:284,27,0	./.	1/1:7,2:9:6.02:67,6,0	0/1:21,5:26:0.43:132,0,0	1/1:7,7:16:11.87:114,12,0	1/1:10,1:13:5.68:28,6,0	1/1:12,0:19:16.91:84,17,0	1/1:11,5:17:14.90:127,15,0	1/1:10,5:16:23.73:226,24,0	1/1:6,5:12:17.67:146,18,0	1/1:1,2:4:5.85:47,6,0
chr10	35763838	.	CA	C	902.92	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.994;DP=714;FS=0.764;HRun=1;HaplotypeScore=68.2229;InbreedingCoeff=0.9984;MQ=80.66;MQ0=0;MQRankSum=-1.713;QD=31.14;ReadPosRankSum=1.680;VQSLOD=3.3847;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,29:29:72.24:998,72,0	0/0:11,0:11:30.09:0,30,456	0/0:38,0:37:94.61:0,95,1359	0/0:23,0:22:66.02:0,66,856	0/0:40,0:40:99:0,120,1839	0/0:20,0:20:60.11:0,60,825	0/0:17,0:17:51.16:0,51,791	0/0:45,0:45:99:0,129,1941	0/0:17,0:17:51.13:0,51,743	0/0:32,0:32:87.29:0,87,1352	0/0:23,0:23:69.20:0,69,1053	0/0:23,0:23:69.18:0,69,1000	0/0:19,0:19:57.16:0,57,863	0/0:20,0:20:60.17:0,60,911	0/0:27,0:27:81.25:0,81,1248	0/0:35,0:35:99:0,102,1577	0/0:30,0:30:90.27:0,90,1385	0/0:20,0:20:60.19:0,60,926	0/0:15,0:15:45.10:0,45,633	0/0:27,0:27:81.23:0,81,1228	0/0:38,0:38:99:0,111,1642	0/0:21,0:21:63.17:0,63,914	0/0:27,0:27:81.26:0,81,1268	0/0:21,0:21:63.17:0,63,927	0/0:24,0:24:72.23:0,72,1126	0/0:30,0:30:90.25:0,90,1327	0/0:33,0:32:99:0,99,1510	0/0:9,0:9:27.06:0,27,383
chr10	35768340	.	T	TAA	8332.27	PASS	AB=0.704;AC=48;AF=0.857;AN=56;BaseQRankSum=-0.546;DP=618;FS=2.695;HRun=13;HaplotypeScore=91.4649;InbreedingCoeff=0.3150;MQ=75.57;MQ0=0;MQRankSum=-0.787;QD=14.80;ReadPosRankSum=-0.957;VQSLOD=3.9422;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:41:46.40:0,46,730	1/1:1,11:13:30.09:395,30,0	0/1:22,0:20:19.51:20,0,116	0/0:13,0:12:2.68:0,3,46	1/1:5,1:21:28.84:230,29,0	1/1:0,18:18:24.08:326,24,0	1/1:3,11:16:28.39:327,28,0	1/1:9,18:31:53.77:562,54,0	0/1:5,0:18:7.92:65,0,8	1/1:8,21:35:75.78:765,76,0	1/1:4,15:21:35.36:388,35,0	1/1:6,1:24:4.52:101,5,0	1/1:5,16:23:25.32:316,25,0	1/1:3,19:22:30.10:407,30,0	1/1:10,21:34:33.44:640,33,0	1/1:6,0:27:9.52:118,10,0	1/1:4,0:26:1.01:122,1,0	1/1:2,13:16:29.58:375,30,0	1/1:9,10:22:22.15:468,22,0	1/1:4,12:21:38.93:396,39,0	1/1:0,5:5:3.01:41,3,0	1/1:6,17:23:48.43:553,48,0	0/1:7,1:20:6.20:68,0,6	1/1:2,2:24:45.95:220,46,0	0/1:7,8:17:0.81:247,0,1	1/1:8,14:24:41.56:474,42,0	1/1:8,13:23:35.58:414,36,0	1/1:4,12:16:23.57:294,24,0
chr10	35768540	.	AACACACACACACACACACACACACACACAC	A	9194.35	PASS	AB=0.786;AC=31;AF=0.620;AN=50;BaseQRankSum=7.502;DP=442;FS=14.226;HRun=0;HaplotypeScore=282.0741;InbreedingCoeff=0.5890;MQ=60.12;MQ0=12;MQRankSum=-5.920;QD=36.63;ReadPosRankSum=2.865;VQSLOD=2.2234;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:30.10:0,30,2647	./.	0/0:25,0:13:9.03:0,9,330	0/0:31,0:19:21.06:0,21,1073	0/0:12,0:14:3.01:0,3,114	1/1:13,6:19:9.03:694,9,0	./.	1/1:6,3:9:9.03:177,9,0	0/0:13,0:13:21.04:0,21,1218	0/1:8,3:11:35.12:166,0,35	1/1:13,0:13:3.01:48,3,0	1/1:10,1:23:0.97:1157,1,0	1/1:7,9:16:21.07:1619,21,0	1/1:8,9:18:20.69:1481,21,0	1/1:17,10:27:15.05:1156,15,0	0/0:22,0:22:39.13:0,39,3103	0/0:16,0:24:36.12:0,36,3607	0/0:10,0:10:5.75:0,6,49	1/1:12,0:12:2.97:21,3,0	./.	1/1:17,0:17:1.24:3,1,0	1/1:6,0:5:3:25,3,0	0/0:7,0:7:3:0,3,25	1/1:16,0:21:4.12:172,4,0	1/1:12,0:12:2.99:23,3,0	1/1:14,5:19:15.03:601,15,0	1/1:15,8:22:21.07:1619,21,0	1/1:0,5:5:3.01:231,3,0
chr10	35768843	.	AT	A	3553.53	PASS	AB=0.727;AC=47;AF=0.979;AN=48;BaseQRankSum=-1.389;DP=239;FS=0.000;HRun=1;HaplotypeScore=119.0149;InbreedingCoeff=-0.0743;MQ=22.02;MQ0=98;MQRankSum=0.359;QD=15.79;ReadPosRankSum=0.765;VQSLOD=3.6035;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,4:5:12.03:139,12,0	1/1:1,0:1:3.01:33,3,0	./.	./.	1/1:11,9:11:24.03:264,24,0	1/1:9,9:9:24.07:281,24,0	1/1:4,1:2:6.02:69,6,0	1/1:6,1:2:3:25,3,0	1/1:0,6:8:24.07:276,24,0	1/1:1,1:2:6.01:65,6,0	1/1:2,3:4:12.03:139,12,0	1/1:3,5:8:18.87:196,19,0	1/1:14,0:7:2.96:19,3,0	1/1:2,5:6:18.05:210,18,0	1/1:7,4:6:9.91:105,10,0	1/1:5,10:10:28.32:316,28,0	1/1:9,4:5:11.99:125,12,0	./.	1/1:8,3:10:21.50:219,22,0	1/1:0,11:12:27.08:314,27,0	./.	1/1:2,1:2:4.25:38,4,0	1/1:1,3:5:12.03:138,12,0	1/1:2,1:2:2.93:35,3,0	0/1:5,3:4:33.21:93,0,33	1/1:2,5:6:18.05:207,18,0	1/1:5,4:4:12.04:141,12,0	1/1:5,3:3:9.03:105,9,0
chr10	35768845	.	A	AC	1029.56	PASS	AB=0.949;AC=39;AF=0.813;AN=48;BaseQRankSum=0.860;DP=242;FS=0.000;HRun=0;HaplotypeScore=139.6369;InbreedingCoeff=0.1089;MQ=22.20;MQ0=97;MQRankSum=-0.468;QD=5.07;ReadPosRankSum=4.089;VQSLOD=3.1853;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,0:5:10.99:49,11,0	1/1:1,0:1:2.60:10,3,0	./.	./.	1/1:20,1:11:19.27:81,19,0	1/1:18,0:9:20.82:92,21,0	1/1:5,0:2:2.60:12,3,0	0/0:9,0:2:1.25:0,1,3	1/1:8,0:8:18.96:84,19,0	1/1:4,0:3:4.66:21,5,0	1/1:6,0:4:10.73:44,11,0	0/1:6,2:8:0.58:76,0,1	0/0:14,1:7:2.37:0,2,8	1/1:8,0:6:15.44:66,15,0	0/1:12,0:6:10.19:20,0,10	1/1:15,0:10:8.62:113,9,0	1/1:12,0:4:9.11:38,9,0	./.	0/1:16,1:10:10.03:83,0,10	1/1:14,0:13:20.30:99,20,0	./.	0/1:3,0:2:6.13:6,0,14	1/1:5,0:5:10.73:45,11,0	1/1:4,0:2:2.58:11,3,0	0/1:9,0:5:25.68:26,0,31	1/1:10,0:8:15.40:75,15,0	1/1:9,0:4:11.28:54,11,0	1/1:8,0:3:8.39:40,8,0
chr10	35768847	.	TA	T	3184.86	PASS	AB=1.000;AC=47;AF=0.979;AN=48;BaseQRankSum=4.569;DP=239;FS=0.000;HRun=3;HaplotypeScore=123.3889;InbreedingCoeff=-0.0874;MQ=21.96;MQ0=99;MQRankSum=1.129;QD=14.15;ReadPosRankSum=4.945;VQSLOD=2.7499;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,0:5:12.03:127,12,0	1/1:1,0:1:3.01:30,3,0	./.	./.	1/1:21,0:11:18.15:221,18,0	1/1:18,0:9:22.94:262,23,0	1/1:4,0:2:6.02:65,6,0	1/1:11,0:2:2.99:24,3,0	1/1:8,0:8:24.06:258,24,0	1/1:4,0:3:4.89:61,5,0	1/1:6,0:4:12.03:128,12,0	1/1:8,0:8:16.94:193,17,0	1/1:9,6:7:1.89:35,2,0	1/1:8,0:6:18.04:193,18,0	1/1:12,0:6:5.48:89,5,0	1/1:16,0:10:27.07:289,27,0	1/1:11,0:4:9.02:98,9,0	./.	1/1:14,0:7:21.02:206,21,0	1/1:14,0:13:24.29:288,24,0	./.	1/1:3,0:2:3.01:32,3,0	1/1:5,0:5:12.03:128,12,0	1/1:4,0:2:2.93:33,3,0	0/1:9,0:5:23.90:86,0,24	1/1:10,0:8:16.40:197,16,0	1/1:9,0:4:12.03:130,12,0	1/1:8,0:3:9.02:99,9,0
chr10	35769969	.	C	CTT	1234.13	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=2.244;DP=606;FS=8.514;HRun=13;HaplotypeScore=89.2462;InbreedingCoeff=0.8635;MQ=74.88;MQ0=2;MQRankSum=-0.364;QD=10.37;ReadPosRankSum=-0.758;VQSLOD=1.8493;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:41:44.71:0,45,537	0/0:8,0:8:11.25:0,11,149	0/0:24,0:16:10.28:0,10,70	0/1:19,0:16:3.06:36,0,3	1/1:6,9:20:37.56:318,38,0	0/0:23,0:23:37.61:0,38,386	0/0:10,0:11:23.68:0,24,197	0/0:28,0:30:59.44:0,59,537	1/1:5,10:16:6.75:52,7,0	0/0:24,0:26:38.35:0,38,373	0/0:15,0:15:23.80:0,24,211	0/0:24,0:24:50.81:0,51,444	0/0:14,0:16:21.96:0,22,218	0/0:17,0:17:32.78:0,33,286	0/0:22,0:22:50.70:0,51,437	1/1:7,20:28:39.12:504,39,0	1/1:6,24:35:41.57:483,42,0	0/0:19,0:19:48.74:0,49,415	0/0:22,0:23:37.28:0,37,349	0/0:15,0:15:38.97:0,39,342	0/0:16,0:16:26.81:0,27,233	0/0:15,0:18:14.32:0,14,172	0/0:22,0:22:35.55:0,36,301	0/0:14,0:16:32.29:0,32,255	0/0:13,0:16:19.27:0,19,206	0/0:22,0:23:38.57:0,39,329	0/0:35,0:36:74.42:0,74,637	0/0:25,0:26:62.70:0,63,562
chr10	35771276	.	A	AGTTAT	12998.82	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-12.308;DP=723;FS=2.998;HRun=0;HaplotypeScore=142.0438;InbreedingCoeff=0.9968;MQ=79.60;MQ0=0;MQRankSum=-8.004;QD=73.03;ReadPosRankSum=3.404;VQSLOD=6.6228;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,141,2917	0/0:5,0:5:15.05:0,15,299	0/0:21,0:21:57.20:0,57,1170	0/0:24,0:24:60.16:0,60,1142	1/1:8,20:28:63.22:1846,63,0	0/0:34,0:34:93.31:0,93,1914	0/0:31,0:31:81.26:0,81,1660	0/0:40,0:40:99:0,111,2276	1/1:2,17:19:48.15:1487,48,0	0/0:27,0:27:72.22:0,72,1459	0/0:29,0:29:81.26:0,81,1661	1/1:4,26:31:87.30:2574,87,0	0/0:16,0:16:48.16:0,48,1000	0/0:20,0:20:57.18:0,57,1145	0/0:29,0:29:84.29:0,84,1750	1/1:9,34:43:99:3488,114,0	1/1:5,12:19:38.96:1088,39,0	0/0:26,0:26:71.95:0,72,1511	0/0:14,0:14:39.13:0,39,819	0/0:20,0:20:57.20:0,57,1197	0/0:34,0:34:84.27:0,84,1710	0/0:23,0:23:66.23:0,66,1385	1/1:3,19:23:63.22:1851,63,0	1/1:3,11:15:24.55:665,25,0	0/0:28,0:28:81.25:0,81,1623	0/0:27,0:27:75.26:0,75,1575	0/0:26,0:26:69.22:0,69,1394	0/0:22,0:22:66.23:0,66,1372
chr10	35771590	.	C	CT	8255.27	PASS	AB=0.794;AC=50;AF=0.893;AN=56;BaseQRankSum=-5.780;DP=513;FS=2.757;HRun=10;HaplotypeScore=65.6571;InbreedingCoeff=0.5848;MQ=73.34;MQ0=0;MQRankSum=-1.740;QD=18.18;ReadPosRankSum=0.116;VQSLOD=5.3954;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:87.10:0,87,703	1/1:1,4:6:11.86:110,12,0	0/0:17,0:14:8.53:0,9,95	0/1:22,0:19:13.33:13,0,68	1/1:1,2:23:54.63:309,55,0	1/1:3,19:22:32.86:552,33,0	1/1:3,12:16:29.94:302,30,0	1/1:11,21:33:41.22:590,41,0	1/1:2,2:12:28.81:179,29,0	1/1:10,22:33:34.82:582,35,0	1/1:5,12:17:36.01:363,36,0	1/1:3,13:16:29.94:303,30,0	1/1:3,14:19:41.97:430,42,0	1/1:1,8:9:21.05:224,21,0	1/1:2,13:15:8.44:295,8,0	1/1:1,2:14:31.54:180,32,0	1/1:4,3:26:48.90:296,49,0	0/1:5,13:20:0.94:369,0,1	1/1:4,16:21:47.94:476,48,0	1/1:5,6:11:15.04:160,15,0	1/1:2,11:14:35.92:366,36,0	1/1:1,5:6:15.04:160,15,0	1/1:4,15:19:8.44:295,8,0	1/1:1,8:9:21.05:224,21,0	1/1:1,11:13:29.94:302,30,0	1/1:5,26:31:68.99:689,69,0	1/1:5,9:14:5.44:263,5,0	1/1:6,7:13:21.05:224,21,0
chr10	35771729	.	T	TAA	6713.55	PASS	AB=0.844;AC=50;AF=0.893;AN=56;BaseQRankSum=-3.882;DP=412;FS=8.459;HRun=7;HaplotypeScore=54.8659;InbreedingCoeff=0.2309;MQ=59.54;MQ0=12;MQRankSum=2.791;QD=16.78;ReadPosRankSum=2.157;VQSLOD=1.5303;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:8.11:0,8,97	1/1:2,3:6:9.03:138,9,0	0/1:20,0:8:1.97:2,0,45	0/1:18,0:6:9.45:9,0,45	1/1:6,1:18:4:66,4,0	1/1:7,17:21:49.67:710,50,0	1/1:2,6:9:20.56:304,21,0	0/1:12,7:11:48.87:187,0,49	1/1:1,0:9:12.48:44,12,0	1/1:3,16:15:36.08:534,36,0	1/1:3,8:10:22.84:307,23,0	1/1:11,1:12:9.03:117,9,0	1/1:5,4:9:18.06:273,18,0	1/1:3,5:8:14.41:205,14,0	1/1:0,10:11:18.06:295,18,0	1/1:2,0:11:14.29:49,14,0	1/1:5,0:29:33.93:156,34,0	1/1:4,15:20:36.12:578,36,0	1/1:11,9:19:36.09:528,36,0	1/1:12,7:18:15.04:224,15,0	1/1:3,7:9:3.01:49,3,0	1/1:1,3:5:5.93:40,6,0	1/1:3,0:3:6.02:78,6,0	1/1:3,10:13:12.04:197,12,0	1/1:2,11:13:9.03:148,9,0	0/1:9,10:19:30.78:449,0,31	1/1:7,15:21:36.59:556,37,0	1/1:2,17:19:30.10:472,30,0
chr10	35771736	.	A	AAAG	3622.57	PASS	AB=0.939;AC=35;AF=0.625;AN=56;BaseQRankSum=-3.280;DP=400;FS=8.737;HRun=0;HaplotypeScore=61.4555;InbreedingCoeff=-0.0600;MQ=55.37;MQ0=17;MQRankSum=2.258;QD=10.38;ReadPosRankSum=1.573;VQSLOD=1.7313;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:12,0:13:5.14:5,0,85	1/1:5,0:5:5.99:49,6,0	0/1:16,0:5:6.14:6,0,31	0/1:19,0:6:3.75:4,0,55	0/1:18,0:17:35.80:36,0,47	0/1:21,2:21:1.70:344,0,2	0/1:9,0:9:5.51:125,0,6	0/1:23,0:12:99:134,0,115	0/0:9,0:9:11.09:0,11,35	1/1:21,0:17:8.34:383,8,0	1/1:11,0:10:4.29:141,4,0	1/1:1,9:11:9.03:148,9,0	0/1:8,0:8:22.54:97,0,23	0/1:7,0:8:3.79:112,0,4	1/1:10,0:10:17.98:148,18,0	0/0:12,0:12:11.14:0,11,52	0/0:30,0:30:56.50:0,57,235	1/1:16,0:16:35.97:301,36,0	0/1:16,0:15:15.10:252,0,15	1/1:12,0:11:14.99:126,15,0	0/1:13,0:9:12.75:13,0,51	1/1:4,0:4:4.21:23,4,0	0/1:1,3:5:12.77:101,0,13	0/1:11,0:11:7.57:84,0,8	0/1:12,0:12:4.32:62,0,4	0/1:17,0:15:80.63:306,0,81	1/1:19,1:19:26.56:293,27,0	1/1:22,1:22:32.98:330,33,0
chr10	35772545	.	TA	T	6336.55	PASS	AB=0.752;AC=36;AF=0.643;AN=56;BaseQRankSum=-4.917;DP=522;FS=7.548;HRun=11;HaplotypeScore=55.3255;InbreedingCoeff=0.6864;MQ=55.52;MQ0=27;MQRankSum=0.958;QD=16.59;ReadPosRankSum=-1.361;VQSLOD=4.9602;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:17:45.11:0,45,479	1/1:3,11:14:9.32:201,9,0	0/1:3,0:3:0.72:1,0,27	0/0:4,0:2:6.01:0,6,61	0/0:26,0:23:42.30:0,42,246	1/1:3,22:24:50.93:419,51,0	1/1:1,11:11:26.91:215,27,0	1/1:13,28:33:77.18:608,77,0	0/0:17,1:18:42.45:0,42,251	1/1:2,19:23:61.01:480,61,0	1/1:1,27:29:70.95:572,71,0	0/1:11,2:13:22.18:22,0,197	1/1:2,15:16:32.96:271,33,0	0/1:3,10:13:5.02:170,0,5	1/1:3,22:25:44.94:369,45,0	0/0:21,0:21:31.53:0,32,271	0/0:23,0:18:30.95:0,31,283	1/1:4,15:18:41.94:345,42,0	1/1:5,9:15:28.99:228,29,0	1/1:4,23:25:56.81:452,57,0	1/1:0,11:11:26.97:222,27,0	1/1:0,4:4:11.99:99,12,0	0/0:11,1:12:5.42:0,5,255	0/0:14,1:15:8.42:0,8,285	0/1:4,11:14:34.02:167,0,34	1/1:4,31:34:92.85:758,93,0	1/1:2,25:27:62.91:517,63,0	1/1:4,9:9:26.97:222,27,0
chr10	35773065	.	GGTGTGT	G	1742.48	PASS	AB=0.983;AC=33;AF=0.660;AN=50;BaseQRankSum=0.313;DP=522;FS=7.047;HRun=0;HaplotypeScore=123.1153;InbreedingCoeff=0.2520;MQ=69.81;MQ0=34;MQRankSum=2.219;QD=5.19;ReadPosRankSum=-0.128;VQSLOD=1.6170;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:25:3.01:0,3,73	1/1:6,0:6:9.03:173,9,0	./.	0/0:30,0:19:0:0,0,0	./.	1/1:25,0:24:20.81:184,21,0	1/1:20,0:20:5.93:41,6,0	1/1:20,0:18:2.96:26,3,0	./.	0/1:18,0:16:62.74:63,0,75	0/0:9,0:9:0.47:0,0,1	0/0:10,0:10:9.36:0,9,198	1/1:17,0:17:24.07:412,24,0	0/1:12,0:12:5.37:59,0,5	0/1:22,0:22:9.10:9,0,31	1/1:11,0:13:3.01:42,3,0	1/1:27,0:25:6.91:102,7,0	1/1:19,0:19:16.46:151,16,0	1/1:13,3:15:4.75:106,5,0	1/1:11,0:15:2.97:20,3,0	1/1:38,0:31:3.01:60,3,0	1/1:9,9:17:3.01:55,3,0	0/0:26,0:25:12.58:0,13,292	0/0:35,0:31:20.98:0,21,445	0/1:11,0:11:25.22:25,0,38	1/1:13,7:18:10.96:189,11,0	0/1:10,1:11:13.26:54,0,13	1/1:6,0:4:9.01:119,9,0
chr10	35773136	.	GAGAGAGAGAGAA	G	147.54	PASS	AB=0.889;AC=5;AF=0.093;AN=54;BaseQRankSum=0.096;DP=556;FS=4.016;HRun=0;HaplotypeScore=184.2641;InbreedingCoeff=0.1490;MQ=49.09;MQ0=29;MQRankSum=-0.448;QD=1.87;ReadPosRankSum=-4.148;VQSLOD=1.8071;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:19:27.79:0,28,531	0/0:11,0:11:24.02:0,24,544	0/0:10,0:4:1:0,1,57	0/0:21,0:7:13.92:0,14,150	./.	0/0:14,0:14:27.48:0,27,1054	0/0:16,0:15:24.44:0,24,608	0/0:37,0:36:77.77:0,78,1437	0/1:5,5:10:42.89:90,0,43	0/0:20,0:17:45.15:0,45,1813	0/0:13,0:12:27.85:0,28,841	0/0:17,0:16:5.89:0,6,162	0/0:24,0:23:53.63:0,54,1472	0/0:18,0:17:22.08:0,22,1036	0/0:34,0:33:67.35:0,67,2534	0/1:26,0:25:99:120,0,383	1/1:26,0:25:2.67:11,3,0	0/0:20,0:20:47.49:0,47,1703	0/0:14,0:13:25.59:0,26,724	0/0:21,0:20:26.10:0,26,601	0/0:21,0:17:28.49:0,28,635	0/0:17,0:17:21.48:0,21,901	0/1:17,0:16:33.36:33,0,228	0/0:22,0:17:15.05:0,15,613	0/0:22,0:21:26.95:0,27,735	0/0:27,0:26:69.19:0,69,2771	0/0:27,0:26:45.19:0,45,1837	0/0:13,0:12:33.05:0,33,1047
chr10	35773140	.	GAGAGAGAA	G	400.95	PASS	AB=1.000;AC=10;AF=0.185;AN=54;BaseQRankSum=3.185;DP=569;FS=12.748;HRun=0;HaplotypeScore=161.1569;InbreedingCoeff=0.3679;MQ=50.92;MQ0=26;MQRankSum=0.655;QD=2.93;ReadPosRankSum=-3.155;VQSLOD=1.2345;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:22:32.63:0,33,450	0/0:10,0:10:24.01:0,24,395	0/0:15,0:8:5.91:0,6,107	0/0:24,0:10:19.91:0,20,185	./.	0/0:13,0:13:27:0,27,709	0/0:16,0:15:24.38:0,24,410	0/0:35,0:34:39.05:0,39,950	1/1:9,0:9:8.39:127,8,0	0/0:20,0:18:34.01:0,34,1177	0/0:14,0:13:32.53:0,33,642	0/0:18,0:17:6.36:0,6,112	0/1:25,0:24:8.69:9,0,786	0/0:19,0:18:28.08:0,28,801	0/0:34,0:33:47.43:0,47,1802	1/1:24,1:24:1.31:272,1,0	1/1:30,0:29:3.48:51,3,0	0/0:20,0:20:31.14:0,31,1126	0/0:15,0:14:29:0,29,570	0/0:21,0:21:27.01:0,27,478	0/0:23,0:19:33.84:0,34,547	0/0:15,0:15:21.01:0,21,657	0/1:15,0:14:61.65:62,0,125	0/1:21,0:16:8.92:9,0,369	0/0:22,0:21:31.60:0,32,591	0/0:29,0:28:74.58:0,75,1913	0/0:27,0:26:47.31:0,47,1236	0/1:12,0:12:3.62:4,0,628
chr10	35773142	.	GAGAGAA	G	707.58	PASS	AB=1.000;AC=10;AF=0.185;AN=54;BaseQRankSum=2.402;DP=570;FS=25.295;HRun=0;HaplotypeScore=146.0929;InbreedingCoeff=0.4283;MQ=51.12;MQ0=25;MQRankSum=0.844;QD=5.16;ReadPosRankSum=-3.203;VQSLOD=0.4137;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:22:11.91:0,12,378	0/0:10,0:10:10.43:0,10,337	0/0:16,0:9:8.52:0,9,126	0/0:24,0:10:19.91:0,20,185	./.	0/0:13,0:13:13.54:0,14,520	0/0:17,0:16:27.23:0,27,361	0/0:36,0:35:34.72:0,35,800	1/1:9,0:9:9.03:159,9,0	0/0:19,0:18:15.80:0,16,843	0/0:14,0:13:32.72:0,33,524	0/0:18,0:17:6.36:0,6,87	0/1:24,0:23:26.16:26,0,586	0/0:19,0:18:28.08:0,28,685	0/0:34,0:33:47.31:0,47,1460	1/1:26,0:25:44.04:525,44,0	1/1:4,26:29:3.48:67,3,0	0/0:20,0:20:8.69:0,9,834	0/0:15,0:14:33.65:0,34,505	0/0:22,0:22:28.57:0,29,429	0/0:24,0:20:37.31:0,37,503	0/0:15,0:15:21.01:0,21,536	0/1:15,0:14:61.64:62,0,76	0/1:21,0:16:8.95:9,0,271	0/0:21,0:20:31.61:0,32,493	0/0:28,0:27:74.53:0,75,1484	0/0:27,0:26:47.02:0,47,966	0/1:12,0:12:1.43:1,0,512
chr10	35773148	.	A	AAG	429.48	PASS	AB=1.000;AC=7;AF=0.130;AN=54;BaseQRankSum=3.630;DP=564;FS=0.000;HRun=0;HaplotypeScore=115.6040;InbreedingCoeff=0.6609;MQ=53.61;MQ0=20;MQRankSum=-2.264;QD=5.51;ReadPosRankSum=-1.807;VQSLOD=2.2544;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:21:32.16:0,32,338	0/0:11,0:11:27.08:0,27,327	0/0:17,0:10:7.05:0,7,205	0/0:24,0:10:22.52:0,23,238	./.	0/0:14,0:14:26.96:0,27,259	0/0:16,0:15:29.88:0,30,305	0/0:36,0:35:57.35:0,57,711	0/0:8,0:8:6.79:0,7,28	0/0:21,0:20:16.61:0,17,300	0/0:15,0:14:33:0,33,361	1/1:5,13:17:2.75:50,3,0	0/0:26,0:25:39.22:0,39,423	0/0:18,0:17:40.66:0,41,454	0/0:33,0:32:70.96:0,71,714	0/1:28,0:27:25.58:26,0,53	0/0:26,0:25:2.80:0,3,13	0/0:17,0:17:31.98:0,32,386	0/0:16,0:16:38.97:0,39,426	0/0:20,0:20:32.55:0,33,368	0/0:26,0:24:44.51:0,45,441	0/0:16,0:16:29.63:0,30,326	1/1:11,1:12:20.90:288,21,0	1/1:9,11:16:12.04:199,12,0	0/0:19,0:18:29.29:0,29,306	0/0:30,0:29:59.93:0,60,678	0/0:25,0:24:13.09:0,13,295	0/0:13,0:13:35.09:0,35,367
chr10	35774532	.	A	ATG	1412.91	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-6.257;DP=598;FS=9.690;HRun=0;HaplotypeScore=71.3992;InbreedingCoeff=0.9804;MQ=62.43;MQ0=2;MQRankSum=0.296;QD=27.17;ReadPosRankSum=1.752;VQSLOD=4.3320;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:96.25:0,96,1146	0/0:9,0:9:24.04:0,24,270	0/0:16,0:14:11.16:0,11,146	0/0:14,0:11:18.76:0,19,226	0/0:23,0:23:54.16:0,54,657	0/0:22,0:22:45.13:0,45,545	0/0:25,0:25:48.12:0,48,569	0/0:29,0:29:54.14:0,54,627	0/0:29,0:29:69.13:0,69,835	0/0:23,0:23:57.16:0,57,687	0/0:15,0:15:33.09:0,33,396	1/1:5,15:20:33.11:539,33,0	0/0:20,0:20:39.10:0,39,470	0/0:21,0:21:45.12:0,45,544	0/0:25,0:25:66.16:0,66,779	0/0:36,0:36:90.26:0,90,1091	0/0:29,0:30:72.03:0,72,854	0/0:13,0:13:36.06:0,36,416	0/0:20,0:20:45.09:0,45,508	0/0:15,0:15:42.13:0,42,521	0/0:29,0:29:69.15:0,69,802	0/0:12,0:12:30.08:0,30,358	1/1:2,5:7:18.06:277,18,0	1/1:4,20:24:45.15:738,45,0	0/0:21,0:21:51.10:0,51,580	0/0:24,0:24:57.18:0,57,706	0/0:21,0:21:51.07:0,51,591	0/0:16,0:16:45.14:0,45,557
chr10	35775679	.	CG	C	5437.20	PASS	AB=0.500;AC=47;AF=0.904;AN=52;BaseQRankSum=1.160;DP=222;FS=1.923;HRun=4;HaplotypeScore=131.5848;InbreedingCoeff=0.5424;MQ=47.65;MQ0=0;MQRankSum=-3.415;QD=25.53;ReadPosRankSum=3.041;VQSLOD=3.3451;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,12:16:21.06:251,21,0	1/1:0,4:4:9.03:107,9,0	0/0:4,0:4:7.94:0,8,100	0/0:2,0:2:2.60:0,3,10	0/1:0,2:2:0:0,0,0	1/1:1,6:7:15.04:177,15,0	1/1:3,22:25:54.16:646,54,0	1/1:1,7:8:21.06:250,21,0	1/1:0,3:3:9.03:107,9,0	1/1:3,8:11:24.07:280,24,0	./.	1/1:0,9:9:24.07:286,24,0	1/1:0,6:6:18.06:215,18,0	1/1:0,9:9:27.08:320,27,0	1/1:0,6:6:15.05:179,15,0	1/1:0,2:2:6.02:72,6,0	1/1:0,13:13:30.09:355,30,0	1/1:2,18:20:54.11:624,54,0	1/1:0,10:10:30.09:358,30,0	1/1:1,1:2:3.01:33,3,0	1/1:0,27:27:24.68:286,25,0	1/1:0,3:3:6.02:72,6,0	1/1:0,3:3:6.02:71,6,0	1/1:3,9:12:21.06:251,21,0	1/1:1,1:2:3.01:36,3,0	1/1:0,8:8:24.07:283,24,0	1/1:0,5:5:15.05:179,15,0	./.
chr10	35775696	.	CG	C	3993.22	PASS	AB=0.800;AC=47;AF=0.940;AN=50;BaseQRankSum=1.449;DP=217;FS=2.015;HRun=4;HaplotypeScore=130.1662;InbreedingCoeff=0.2953;MQ=54.37;MQ0=0;MQRankSum=-3.291;QD=19.02;ReadPosRankSum=1.204;VQSLOD=2.5306;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,11:14:30.07:316,30,0	1/1:0,4:4:9.02:93,9,0	0/0:4,0:4:9.03:0,9,118	0/1:3,0:4:2.37:9,0,2	1/1:2,3:5:2.99:30,3,0	1/1:2,1:3:3.01:31,3,0	1/1:3,18:21:54.08:565,54,0	1/1:4,3:7:9.01:90,9,0	1/1:2,2:4:8.96:81,9,0	1/1:0,7:7:18.03:187,18,0	./.	1/1:2,8:10:27.02:268,27,0	1/1:2,2:4:6.01:62,6,0	1/1:3,3:6:12.03:126,12,0	1/1:2,3:5:9.01:84,9,0	./.	1/1:6,9:16:30.08:331,30,0	1/1:5,13:18:33.09:366,33,0	1/1:7,6:13:17.51:159,18,0	1/1:0,1:1:3:25,3,0	1/1:12,18:30:33.86:360,34,0	1/1:1,3:5:6.01:62,6,0	1/1:0,2:2:6.01:64,6,0	1/1:3,12:15:30.08:324,30,0	./.	1/1:4,7:11:24.03:240,24,0	1/1:1,3:4:9.01:87,9,0	1/1:0,1:1:3.01:33,3,0
chr10	35775703	.	CG	C	5278.27	PASS	AC=48;AF=0.923;AN=52;BaseQRankSum=0.455;DP=194;FS=0.000;HRun=1;HaplotypeScore=101.7140;InbreedingCoeff=0.4132;MQ=57.00;MQ0=0;MQRankSum=-3.801;QD=28.38;ReadPosRankSum=0.609;VQSLOD=4.5256;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,11:12:33.10:410,33,0	1/1:1,4:5:11.97:129,12,0	0/0:3,0:3:5.42:0,5,26	0/0:4,0:4:4.45:0,4,13	1/1:0,4:4:2.99:36,3,0	1/1:0,1:1:3.01:36,3,0	1/1:0,21:21:60.02:742,60,0	1/1:1,3:4:12.03:131,12,0	1/1:0,3:3:9.02:105,9,0	1/1:1,7:8:21.04:234,21,0	./.	1/1:0,9:9:27.09:340,27,0	1/1:0,2:2:6.02:74,6,0	1/1:1,4:5:15.05:190,15,0	1/1:0,3:3:9.02:103,9,0	1/1:0,1:1:3.01:38,3,0	1/1:1,13:14:27.56:351,28,0	1/1:2,13:15:38.94:455,39,0	1/1:0,11:11:31.28:346,31,0	1/1:0,1:1:3:27,3,0	1/1:1,30:31:36.22:415,36,0	1/1:3,2:5:6.02:74,6,0	1/1:0,2:2:6.02:75,6,0	1/1:0,13:13:33.10:424,33,0	./.	1/1:0,11:11:30.09:365,30,0	1/1:1,3:4:12.04:142,12,0	1/1:0,1:1:3.01:39,3,0
chr10	35776234	.	A	AG	14135.09	PASS	AB=0.759;AC=54;AF=0.964;AN=56;BaseQRankSum=-2.409;DP=448;FS=2.645;HRun=5;HaplotypeScore=42.2317;InbreedingCoeff=-0.0469;MQ=75.25;MQ0=0;MQRankSum=-2.402;QD=31.55;ReadPosRankSum=1.762;VQSLOD=5.2096;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,28:30:72.23:942,72,0	1/1:1,3:5:9.03:118,9,0	0/1:4,5:9:7.14:125,0,7	0/1:6,1:7:21.53:67,0,22	1/1:0,7:7:15.05:197,15,0	1/1:2,15:17:39.13:513,39,0	1/1:5,28:33:78.25:1026,78,0	1/1:2,6:8:12.04:156,12,0	1/1:0,20:21:60.19:781,60,0	1/1:1,13:13:39.13:512,39,0	1/1:1,7:8:18.03:218,18,0	1/1:4,15:19:39.13:513,39,0	1/1:2,14:16:39.13:513,39,0	1/1:0,12:12:36.12:473,36,0	1/1:0,8:8:24.08:316,24,0	1/1:3,16:19:48.15:618,48,0	1/1:0,31:31:90.29:1184,90,0	1/1:1,18:19:51.17:668,51,0	1/1:3,17:20:51.11:621,51,0	1/1:0,8:8:24.08:315,24,0	1/1:7,50:57:99:1776,135,0	1/1:0,10:10:21.07:274,21,0	1/1:0,2:2:3.01:39,3,0	1/1:2,24:26:66.21:868,66,0	1/1:1,10:11:27.09:355,27,0	1/1:2,13:15:36.12:472,36,0	1/1:4,9:13:27.09:355,27,0	1/1:0,3:3:9.03:118,9,0
chr10	35787434	.	AGAGGC	A	6130.19	PASS	AC=34;AF=0.654;AN=52;BaseQRankSum=-0.357;DP=369;FS=10.761;HRun=0;HaplotypeScore=111.9028;InbreedingCoeff=0.8723;MQ=73.06;MQ0=0;MQRankSum=-9.443;QD=27.74;ReadPosRankSum=-1.677;VQSLOD=3.2737;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:39.13:0,39,997	1/1:2,3:5:6.02:118,6,0	0/0:8,0:8:15.02:0,15,238	0/0:9,0:10:24.08:0,24,623	0/0:4,0:4:6.02:0,6,102	1/1:7,2:9:6.02:118,6,0	1/1:18,30:48:99:1754,99,0	1/1:1,6:7:18.05:303,18,0	0/0:14,0:14:39.12:0,39,1093	1/1:8,4:12:21.06:336,21,0	1/1:1,2:3:2.97:20,3,0	0/0:15,0:15:39.13:0,39,1072	1/1:2,3:6:12.04:236,12,0	1/1:4,4:8:12.03:202,12,0	1/1:4,2:6:9.03:166,9,0	0/0:15,0:15:33.08:0,33,816	0/0:32,0:32:81.28:0,81,2402	1/1:7,13:20:42.07:729,42,0	1/1:7,5:12:15.05:296,15,0	1/1:1,2:3:8.94:88,9,0	1/1:25,22:46:41.77:469,42,0	./.	./.	0/0:28,0:28:72.25:0,72,1977	1/1:5,6:11:21.06:381,21,0	1/1:5,7:12:30.10:556,30,0	1/1:4,2:6:9.02:143,9,0	1/1:3,3:6:12.04:214,12,0
chr10	35787485	.	CA	C	2137.83	PASS	AB=0.986;AC=45;AF=0.804;AN=56;BaseQRankSum=2.332;DP=473;FS=1.634;HRun=1;HaplotypeScore=132.2760;InbreedingCoeff=0.1142;MQ=67.65;MQ0=0;MQRankSum=1.274;QD=4.68;ReadPosRankSum=9.309;VQSLOD=-0.1034;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:20,2:22:30.49:118,0,30	1/1:5,0:5:8.33:23,8,0	0/0:9,0:9:27.07:0,27,351	0/0:7,0:7:18:0,18,233	1/1:2,0:2:2.22:7,2,0	1/1:9,0:9:2.33:46,2,0	0/1:48,0:48:99:146,0,103	1/1:14,0:14:19.62:54,20,0	1/1:14,0:14:8.16:76,8,0	0/1:16,0:16:31.25:55,0,31	1/1:8,0:8:12.45:63,12,0	1/1:31,0:31:22.85:192,23,0	1/1:11,0:11:2.13:52,2,0	1/1:18,0:18:27.29:177,27,0	1/1:5,0:5:12.41:46,12,0	1/1:11,1:12:4.49:88,4,0	0/1:30,0:30:47.17:129,0,47	1/1:27,0:27:23.01:178,23,0	0/1:21,0:21:30.89:31,0,83	1/1:4,1:5:13.13:64,13,0	0/1:78,1:79:11.01:268,0,11	1/1:4,0:4:8.70:65,9,0	0/1:3,0:3:10.31:10,0,17	1/1:27,0:27:34.90:164,35,0	1/1:13,1:14:7.97:91,8,0	1/1:18,0:18:11.39:60,11,0	1/1:7,0:7:10.99:36,11,0	1/1:7,0:7:16.47:57,16,0
chr10	35787486	.	AC	A	11014.86	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-2.814;DP=475;FS=5.222;HRun=7;HaplotypeScore=103.8421;InbreedingCoeff=0.8019;MQ=67.70;MQ0=0;MQRankSum=-4.514;QD=24.00;ReadPosRankSum=2.981;VQSLOD=4.8380;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,18:22:51.11:520,51,0	1/1:0,5:5:12.03:122,12,0	0/0:9,0:9:21.06:0,21,247	0/0:7,0:7:18.06:0,18,220	1/1:1,1:2:3:31,3,0	1/1:2,8:10:24.05:244,24,0	1/1:9,38:47:96.20:979,96,0	1/1:0,14:14:39.07:391,39,0	1/1:2,13:15:39.09:398,39,0	1/1:4,12:16:36.06:359,36,0	1/1:2,6:8:15.03:153,15,0	1/1:2,29:31:87.19:886,87,0	1/1:2,9:11:20.97:214,21,0	1/1:1,17:18:51.11:519,51,0	1/1:1,5:6:18.04:183,18,0	1/1:2,10:12:33.07:336,33,0	1/1:5,25:30:66.15:673,66,0	1/1:2,25:27:72.16:732,72,0	1/1:5,15:20:22.18:391,22,0	1/1:1,4:5:15.03:152,15,0	1/1:11,69:80:99:1691,150,0	1/1:0,4:4:8.54:91,9,0	1/1:1,2:3:6.01:61,6,0	1/1:1,26:27:72.16:734,72,0	1/1:3,11:14:27.06:275,27,0	1/1:2,17:19:51.09:512,51,0	1/1:0,6:6:15.03:153,15,0	1/1:0,7:7:21.05:213,21,0
chr10	35791714	.	TA	T	5714.26	PASS	AB=0.674;AC=40;AF=0.714;AN=56;BaseQRankSum=5.800;DP=609;FS=0.000;HRun=13;HaplotypeScore=68.0884;InbreedingCoeff=0.7196;MQ=72.58;MQ0=1;MQRankSum=-0.686;QD=12.34;ReadPosRankSum=2.902;VQSLOD=4.9834;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:84.98:0,85,801	0/1:2,10:12:2.33:148,0,2	0/0:27,0:16:15.92:0,16,96	0/1:20,1:13:9.91:10,0,60	0/0:20,0:20:25.63:0,26,374	0/1:4,11:15:0.10:184,0,0	1/1:4,20:25:37.48:268,37,0	1/1:10,22:35:42.43:440,42,0	0/0:15,0:15:23.82:0,24,213	1/1:7,18:25:50.31:357,50,0	1/1:5,17:22:42.82:317,43,0	1/1:6,14:20:26.71:190,27,0	1/1:5,11:18:10.68:223,11,0	1/1:8,13:22:37.82:268,38,0	0/1:7,11:18:5.32:129,0,5	0/0:21,0:22:50.91:0,51,476	0/0:22,0:25:48.79:0,49,564	1/1:4,12:16:30.71:221,31,0	1/1:6,21:27:62.54:452,63,0	1/1:7,19:27:61.33:427,61,0	1/1:5,14:19:38.77:284,39,0	1/1:10,6:17:13.90:93,14,0	1/1:7,11:18:16.13:146,16,0	1/1:1,15:16:35.76:260,36,0	1/1:7,19:26:27.49:365,27,0	1/1:9,21:30:62.43:448,62,0	1/1:3,22:25:56.66:416,57,0	1/1:2,7:9:8.94:66,9,0
chr10	35792355	.	GA	G	344.43	PASS	AB=0.667;AC=7;AF=0.125;AN=56;BaseQRankSum=-4.891;DP=512;FS=4.118;HRun=17;HaplotypeScore=164.1668;InbreedingCoeff=0.6235;MQ=46.35;MQ0=12;MQRankSum=8.295;QD=3.96;ReadPosRankSum=8.618;VQSLOD=-0.5908;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:46.36:0,46,243	0/0:10,0:9:9.41:0,9,45	0/0:10,0:4:4.63:0,5,16	0/0:5,0:2:4.31:0,4,14	0/1:16,14:31:15.67:92,0,16	0/0:19,0:19:44.32:0,44,237	0/0:20,0:20:34.79:0,35,198	0/0:32,0:26:53.07:0,53,290	1/1:7,7:15:19.40:106,19,0	0/0:17,0:17:29.45:0,29,139	0/0:29,0:27:43.91:0,44,217	0/0:15,0:14:20.69:0,21,112	0/0:18,0:17:23.92:0,24,128	0/0:10,0:10:10.95:0,11,63	0/0:17,0:17:23.28:0,23,136	1/1:8,7:16:0.55:84,1,0	1/1:8,9:24:40.62:198,41,0	0/0:21,0:18:27.72:0,28,149	0/0:23,0:23:43.39:0,43,250	0/0:22,0:20:29.59:0,30,156	0/0:16,0:16:17.05:0,17,82	0/0:16,0:16:18.43:0,18,93	0/0:16,0:16:17.35:0,17,92	0/0:12,0:11:5.64:0,6,26	0/0:18,0:18:29.79:0,30,151	0/0:20,0:22:49.05:0,49,272	0/0:20,0:19:45.83:0,46,264	0/0:10,0:8:11.79:0,12,57
chr10	35793351	.	A	AAC	18170.39	PASS	AB=1.000;AC=46;AF=0.821;AN=56;BaseQRankSum=-12.594;DP=702;FS=14.073;HRun=0;HaplotypeScore=118.3780;InbreedingCoeff=0.8021;MQ=66.23;MQ0=7;MQRankSum=-2.742;QD=32.33;ReadPosRankSum=1.678;VQSLOD=6.5960;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:49:24.34:0,24,329	1/1:0,7:8:17.43:296,17,0	0/0:36,0:22:37.44:0,37,663	0/0:29,0:19:20.44:0,20,580	1/1:2,0:28:50.16:325,50,0	1/1:0,20:20:60.21:1115,60,0	1/1:2,21:24:45.63:837,46,0	1/1:0,36:42:99:1770,123,0	1/1:1,0:25:40.25:283,40,0	1/1:1,20:21:54.64:982,55,0	1/1:1,18:20:47.11:820,47,0	0/0:25,0:26:53.71:0,54,197	1/1:0,27:29:66.22:1177,66,0	1/1:0,22:23:54.05:961,54,0	1/1:2,23:27:54.18:984,54,0	1/1:1,0:26:51.68:267,52,0	1/1:3,0:41:68.11:440,68,0	1/1:0,17:18:48.03:848,48,0	1/1:1,14:20:56.18:852,56,0	1/1:0,16:16:48.03:783,48,0	1/1:0,22:25:65.96:1124,66,0	1/1:0,17:21:54.07:903,54,0	0/1:20,0:20:13.82:14,0,107	0/1:22,0:23:3.28:3,0,113	1/1:2,11:15:33.11:574,33,0	1/1:0,23:26:61.72:1088,62,0	1/1:1,21:22:60.62:1077,61,0	1/1:0,14:18:36.12:648,36,0
chr10	35794780	.	CT	C	4530.13	PASS	AB=1.000;AC=49;AF=0.907;AN=54;BaseQRankSum=5.965;DP=515;FS=72.669;HRun=3;HaplotypeScore=117.0081;InbreedingCoeff=0.5231;MQ=57.05;MQ0=78;MQRankSum=-3.330;QD=10.23;ReadPosRankSum=3.493;VQSLOD=0.3083;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:14,20:19:21.03:231,21,0	1/1:4,3:4:6.02:74,6,0	0/0:28,0:18:51.16:0,51,660	0/0:36,0:26:67.46:0,67,821	1/1:6,15:12:14.95:183,15,0	1/1:0,18:16:21.06:257,21,0	1/1:2,11:11:6.02:74,6,0	1/1:3,17:10:24.07:292,24,0	1/1:8,11:11:27.07:318,27,0	1/1:4,13:10:26.07:328,26,0	1/1:6,6:8:2.91:37,3,0	1/1:6,12:11:17.98:204,18,0	1/1:8,9:13:29.88:296,30,0	0/1:19,0:18:10.52:29,0,11	1/1:4,15:10:5.96:56,6,0	1/1:9,14:13:23.99:260,24,0	1/1:5,18:13:24.07:293,24,0	./.	1/1:1,6:4:11.98:129,12,0	1/1:3,13:11:9.03:110,9,0	1/1:4,9:5:9.01:110,9,0	1/1:17,0:15:2.93:35,3,0	1/1:1,9:7:9.03:110,9,0	1/1:9,12:11:15.05:184,15,0	1/1:5,17:14:15.04:184,15,0	1/1:5,15:14:39.02:442,39,0	1/1:26,1:24:8.76:57,9,0	1/1:1,8:9:21.01:237,21,0
chr10	35794781	.	TTTGTGTGTGTGTGTGTGTGTGTGTG	T	7433.50	PASS	AB=0.967;AC=46;AF=0.852;AN=54;BaseQRankSum=4.702;DP=511;FS=69.115;HRun=0;HaplotypeScore=218.7479;InbreedingCoeff=0.2738;MQ=54.71;MQ0=79;MQRankSum=-3.518;QD=16.86;ReadPosRankSum=2.289;VQSLOD=1.2635;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:19:99:273,0,198	1/1:6,0:3:6.02:124,6,0	0/0:28,0:18:51.16:0,51,660	0/0:34,0:24:54.87:0,55,869	1/1:21,0:13:14.73:159,15,0	1/1:18,0:16:21.06:282,21,0	1/1:13,0:11:6.02:74,6,0	1/1:20,0:10:24.07:292,24,0	0/1:18,0:11:15.36:221,0,15	1/1:17,0:10:25.70:411,26,0	1/1:9,3:8:9.03:239,9,0	0/1:17,0:11:99:141,0,153	1/1:12,4:11:30.10:1044,30,0	1/1:3,16:18:6.02:412,6,0	1/1:19,0:10:6.02:242,6,0	1/1:21,0:13:23.74:329,24,0	1/1:22,0:12:7.11:158,7,0	./.	1/1:7,1:5:11.82:316,12,0	1/1:16,0:11:9.02:110,9,0	1/1:14,0:5:9.03:110,9,0	1/1:2,15:15:5.94:235,6,0	1/1:10,0:7:9.03:110,9,0	0/1:20,0:10:99:109,0,129	1/1:22,0:14:15.04:184,15,0	1/1:18,2:13:38.74:815,39,0	1/1:6,21:24:9.03:618,9,0	1/1:8,1:9:21.07:424,21,0
chr10	35794867	.	C	CT	16373.88	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-5.406;DP=564;FS=32.419;HRun=0;HaplotypeScore=81.7929;InbreedingCoeff=0.9879;MQ=76.98;MQ0=6;MQRankSum=-6.252;QD=32.81;ReadPosRankSum=5.066;VQSLOD=2.9730;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,34:35:72.24:1043,72,0	1/1:0,6:6:15.05:218,15,0	0/0:32,0:24:54.59:0,55,649	0/0:33,0:27:52.24:0,52,679	1/1:1,21:22:51.17:740,51,0	1/1:1,18:19:48.11:676,48,0	1/1:1,12:13:27.09:394,27,0	1/1:4,21:25:53.50:619,54,0	1/1:1,14:15:33.09:462,33,0	1/1:1,21:22:60.11:779,60,0	1/1:2,23:25:45.15:658,45,0	1/1:0,15:15:30.09:407,30,0	1/1:0,25:26:60.19:846,60,0	1/1:3,10:13:36.03:480,36,0	1/1:0,25:25:57.15:828,57,0	1/1:0,21:21:56.87:824,57,0	1/1:0,18:19:42.07:584,42,0	1/1:0,7:7:21.03:282,21,0	1/1:1,12:13:39.10:506,39,0	1/1:2,22:23:63.02:845,63,0	1/1:0,27:27:54.18:789,54,0	1/1:2,13:15:42.13:592,42,0	1/1:0,14:14:36.12:517,36,0	1/1:1,25:25:59.98:789,60,0	1/1:0,18:18:42.14:611,42,0	1/1:1,28:29:82.76:1085,83,0	1/1:3,7:10:27.08:364,27,0	1/1:0,15:15:30.10:436,30,0
chr10	35795746	.	TA	T	14277.12	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-3.715;DP=647;FS=0.932;HRun=9;HaplotypeScore=78.0380;InbreedingCoeff=0.9970;MQ=69.39;MQ0=0;MQRankSum=-5.611;QD=23.18;ReadPosRankSum=5.398;VQSLOD=5.2278;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,31:33:81.04:741,81,0	1/1:0,8:8:23.97:211,24,0	0/0:15,0:13:24.04:0,24,253	0/0:15,1:14:26.03:0,26,235	1/1:1,32:33:84.02:769,84,0	1/1:0,19:19:54.03:494,54,0	1/1:1,15:16:39.02:357,39,0	1/1:7,22:29:63:573,63,0	1/1:1,26:27:72.04:659,72,0	1/1:1,16:17:48.02:438,48,0	1/1:2,14:16:36.01:329,36,0	1/1:1,23:24:57.03:522,57,0	1/1:0,20:20:54.03:494,54,0	1/1:2,18:20:42.02:384,42,0	1/1:1,38:39:99:988,108,0	1/1:4,26:30:78.03:714,78,0	1/1:1,23:24:66.04:604,66,0	1/1:4,20:24:57.02:522,57,0	1/1:3,25:28:74.93:665,75,0	1/1:3,24:27:68.87:611,69,0	1/1:3,18:21:54.03:494,54,0	1/1:1,22:23:65.96:593,66,0	1/1:4,21:25:59.18:547,59,0	1/1:3,20:23:43.18:529,43,0	1/1:2,14:17:44.06:390,44,0	1/1:6,29:35:87.04:796,87,0	1/1:5,19:24:54.02:494,54,0	1/1:0,14:14:39.02:357,39,0
chr10	35796761	.	TCCTGGAACTCTCTCTGTAGACCAGGCTGG	T	1156.69	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.200;DP=666;FS=1.571;HRun=0;HaplotypeScore=416.4083;InbreedingCoeff=0.9756;MQ=54.68;MQ0=27;MQRankSum=-3.924;QD=26.29;ReadPosRankSum=1.786;VQSLOD=0.9427;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:11,33:44:18.06:1247,18,0	0/0:8,0:8:24.08:0,24,2677	0/0:30,0:10:24.08:0,24,1204	0/0:37,0:13:34.36:0,34,2143	0/0:25,0:25:72.25:0,72,6930	0/0:22,0:22:66.23:0,66,7480	0/0:26,0:26:78.25:0,78,7813	0/0:35,0:33:93.32:0,93,6972	0/0:28,0:28:84.29:0,84,8952	0/0:13,0:13:39.13:0,39,4759	0/0:13,0:13:39.13:0,39,4132	0/0:17,0:17:51.16:0,51,5820	0/0:18,0:17:51.18:0,51,4831	0/0:26,0:26:78.25:0,78,9258	0/0:31,0:30:93.32:0,93,10024	0/0:28,0:28:81.28:0,81,9066	0/0:39,0:38:99:0,117,12668	0/0:24,0:24:72.25:0,72,8189	0/0:21,0:21:57.19:0,57,4731	0/0:18,0:18:51.18:0,51,5323	0/0:32,0:32:90.31:0,90,9319	0/0:13,0:13:33.10:0,33,3223	0/0:8,0:7:21.07:0,21,1571	0/0:47,0:47:99:0,135,14850	0/0:15,0:15:42.14:0,42,4657	0/0:21,0:21:63.22:0,63,6467	0/0:20,0:20:60.21:0,60,6785	0/0:7,0:7:18.06:0,18,2338
chr10	35799468	.	A	AT	13290.61	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-16.866;DP=703;FS=7.223;HRun=7;HaplotypeScore=64.0724;InbreedingCoeff=0.9976;MQ=74.13;MQ0=0;MQRankSum=-3.558;QD=31.64;ReadPosRankSum=-0.959;VQSLOD=4.4013;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,132,1275	1/1:1,9:10:18.06:217,18,0	0/0:30,0:29:56.23:0,56,598	0/0:17,0:16:39.06:0,39,375	0/0:33,0:33:96.15:0,96,927	1/1:1,29:30:84.26:1015,84,0	1/1:1,34:35:96.29:1160,96,0	1/1:4,30:34:93.23:1106,93,0	0/0:26,0:26:54.08:0,54,521	1/1:3,18:21:54.12:636,54,0	1/1:2,14:16:36.11:435,36,0	0/0:30,0:30:81.11:0,81,777	1/1:3,23:26:69.21:829,69,0	1/1:0,18:18:51.16:616,51,0	1/1:2,29:30:72.22:870,72,0	0/0:19,0:19:54.07:0,54,516	0/0:34,0:34:87.12:0,87,834	1/1:1,22:23:57.17:689,57,0	1/1:0,16:16:48.15:579,48,0	1/1:2,20:22:60.18:720,60,0	1/1:1,26:27:72.22:870,72,0	1/1:2,27:29:78.24:942,78,0	0/0:16,0:16:45.06:0,45,429	0/0:31,0:31:90.14:0,90,869	1/1:2,24:26:72.22:870,72,0	1/1:2,24:26:72.22:869,72,0	1/1:4,18:23:54.17:652,54,0	1/1:1,6:7:18.06:217,18,0
chr10	35800116	.	GTGT	G	19852.86	PASS	AB=0.619;AC=43;AF=0.768;AN=56;BaseQRankSum=5.986;DP=699;FS=3.340;HRun=0;HaplotypeScore=127.1210;InbreedingCoeff=0.8978;MQ=75.45;MQ0=1;MQRankSum=-2.586;QD=38.85;ReadPosRankSum=2.584;VQSLOD=5.5385;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:49:99:0,114,1410	1/1:2,8:10:27.09:421,27,0	0/0:23,0:23:59.98:0,60,1134	0/0:26,0:26:57.28:0,57,992	1/1:5,17:22:54.15:796,54,0	1/1:3,14:17:48.16:727,48,0	1/1:4,25:29:60.16:902,60,0	1/1:4,13:17:39.13:607,39,0	1/1:6,24:30:78.24:1191,78,0	1/1:5,20:25:60.20:936,60,0	1/1:1,6:7:18.05:251,18,0	0/0:39,0:39:99:0,114,2394	1/1:3,21:24:60.19:905,60,0	1/1:4,23:27:69.23:1076,69,0	1/1:0,32:32:96.33:1501,96,0	1/1:10,27:37:84.27:1287,84,0	1/1:5,20:25:57.17:866,57,0	1/1:3,15:18:51.13:770,51,0	1/1:11,18:29:66.22:996,66,0	0/1:5,8:13:28.81:453,0,29	1/1:1,36:37:99:1536,99,0	1/1:6,18:24:60.20:937,60,0	0/0:8,0:8:24.07:0,24,481	0/0:42,0:41:99:0,120,2566	1/1:3,14:17:42.13:637,42,0	1/1:7,22:30:87.26:1308,87,0	1/1:3,25:28:78.26:1201,78,0	1/1:2,11:13:36.12:549,36,0
chr10	35800199	.	A	AT	20911.35	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-8.804;DP=741;FS=3.416;HRun=5;HaplotypeScore=83.5993;InbreedingCoeff=0.9993;MQ=66.94;MQ0=0;MQRankSum=-3.076;QD=34.11;ReadPosRankSum=1.498;VQSLOD=5.0861;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,58:58:99:2210,169,0	1/1:2,14:16:39.13:513,39,0	0/0:17,0:16:22.82:0,23,328	0/0:23,0:22:39.09:0,39,496	1/1:4,19:23:51.08:626,51,0	1/1:1,24:25:72.23:947,72,0	1/1:2,24:26:60.20:789,60,0	1/1:3,32:35:96.30:1248,96,0	1/1:3,31:34:90.29:1184,90,0	1/1:4,26:30:81.22:1046,81,0	1/1:3,13:16:36.12:474,36,0	0/0:34,0:34:84.17:0,84,887	1/1:6,17:23:60.17:757,60,0	1/1:1,21:22:60.20:790,60,0	1/1:7,21:28:66.21:868,66,0	1/1:5,24:29:84.25:1077,84,0	1/1:5,27:32:75.24:982,75,0	1/1:2,21:23:63.20:828,63,0	1/1:7,18:25:60.18:775,60,0	1/1:3,18:21:48.16:631,48,0	1/1:4,21:25:66.20:853,66,0	1/1:3,21:24:69.21:882,69,0	0/0:14,0:14:36.09:0,36,387	0/0:39,0:39:99:0,114,1225	1/1:2,20:22:57.19:750,57,0	1/1:2,35:37:99:1401,108,0	1/1:4,18:23:63.17:787,63,0	1/1:3,13:16:42.07:496,42,0
chr10	35802095	.	GCAGGCGAATCTCTGAGTTCGAGGT	G	8424.31	PASS	AB=0.588;AC=7;AF=0.125;AN=56;BaseQRankSum=10.686;DP=512;FS=7.032;HRun=0;HaplotypeScore=283.7686;InbreedingCoeff=0.7998;MQ=52.31;MQ0=6;MQRankSum=-9.410;QD=105.30;ReadPosRankSum=6.323;VQSLOD=3.4463;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,100,6469	0/0:3,0:3:9.03:0,9,1006	0/0:25,0:16:41.51:0,42,2128	0/0:22,0:16:48.16:0,48,3593	1/1:4,15:19:30.03:1785,30,0	0/0:26,0:25:66.12:0,66,4946	0/0:11,0:11:27.08:0,27,2261	0/0:16,0:16:36.04:0,36,2322	1/1:2,17:19:33.11:2158,33,0	0/0:24,0:24:51.06:0,51,2288	0/0:7,0:7:21.01:0,21,1449	0/0:17,0:17:45.09:0,45,4011	0/0:16,0:16:42.12:0,42,3310	0/0:15,0:15:42.59:0,43,3430	0/0:28,0:28:84.24:0,84,7295	1/1:1,21:22:50.87:3340,51,0	0/1:6,14:19:73.10:1142,0,73	0/0:18,0:18:54.17:0,54,5523	0/0:23,0:22:57.11:0,57,2804	0/0:18,0:18:32.12:0,32,2005	0/0:19,0:19:45.11:0,45,2331	0/0:13,0:13:15.09:0,15,198	0/0:9,0:9:9.03:0,9,732	0/0:16,0:16:45.13:0,45,4232	0/0:16,0:16:35.56:0,36,920	0/0:18,0:18:48.05:0,48,2999	0/0:21,0:21:60.11:0,60,3837	0/0:14,0:14:42.13:0,42,4452
chr10	35803916	.	G	GAA	239.09	PASS	AB=0.667;AC=13;AF=0.464;AN=28;BaseQRankSum=1.521;DP=147;FS=30.965;HRun=0;HaplotypeScore=22.0465;InbreedingCoeff=0.5476;MQ=98.09;MQ0=21;MQRankSum=-2.987;QD=9.20;ReadPosRankSum=-5.116;VQSLOD=0.9441;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:3,1:1:2.92:17,3,0	./.	0/0:14,0:14:22.78:0,23,532	0/0:14,0:14:34.72:0,35,558	1/1:2,0:2:2.90:16,3,0	./.	./.	1/1:4,0:4:8.44:53,8,0	./.	./.	./.	0/0:24,0:22:66.21:0,66,1050	./.	0/0:3,0:3:3.01:0,3,44	./.	1/1:3,1:4:5.93:55,6,0	./.	1/1:4,0:2:2.97:20,3,0	./.	0/1:1,1:2:41.92:49,0,42	0/0:1,0:1:3.01:0,3,37	./.	0/0:19,0:18:51.17:0,51,830	0/0:20,0:19:51.17:0,51,825	1/1:4,1:4:9.03:150,9,0	./.	./.	./.
chr10	35805546	.	TC	T	165.23	PASS	AC=10;AF=1.00;AN=10;DP=261;FS=0.000;HRun=1;HaplotypeScore=13.3545;MQ=6.75;MQ0=217;QD=4.24;VQSLOD=0.1675;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	1/1:0,4:2:3.01:42,3,0	./.	./.	1/1:7,0:2:2.22:7,2,0	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	1/1:6,4:4:11.91:101,12,0	./.	./.	1/1:7,1:1:3.01:42,3,0	./.	1/1:9,1:1:3.01:41,3,0
chr10	35805730	.	GTATAA	G	150.12	PASS	AB=0.921;AC=3;AF=0.150;AN=20;BaseQRankSum=2.750;DP=414;FS=0.000;HRun=0;HaplotypeScore=14.1178;InbreedingCoeff=0.1218;MQ=8.05;MQ0=343;MQRankSum=-0.349;QD=3.19;ReadPosRankSum=0.194;VQSLOD=0.6300;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	./.	1/1:10,2:1:3.01:65,3,0	./.	0/0:14,0:4:12.04:0,12,324	0/0:3,0:1:3.01:0,3,95	./.	./.	0/0:16,0:5:12.04:0,12,380	./.	0/0:11,0:2:6.02:0,6,190	./.	0/0:12,0:1:3.01:0,3,95	0/1:32,3:7:99:165,0,175	./.	./.	./.	./.	./.	./.	0/0:32,0:3:6.02:0,6,189	./.	0/0:10,0:1:3.01:0,3,95	0/0:5,0:3:9.03:0,9,285	./.
chr10	35805876	.	G	GTA	987.17	PASS	AB=0.733;AC=8;AF=0.174;AN=46;BaseQRankSum=1.545;DP=245;FS=1.726;HRun=0;HaplotypeScore=63.0888;InbreedingCoeff=0.0654;MQ=42.83;MQ0=13;MQRankSum=-1.988;QD=10.73;ReadPosRankSum=-0.307;VQSLOD=3.3098;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:2,0:2:6.02:0,6,73	0/0:5,0:3:6.02:0,6,73	0/0:3,0:2:0:0,0,0	0/0:6,0:2:5.19:0,5,20	0/1:8,4:12:61.27:61,0,194	0/0:9,0:8:18.06:0,18,218	0/1:13,1:13:27.18:27,0,197	0/0:25,1:23:17.64:0,18,654	0/1:10,5:14:66.51:67,0,261	./.	./.	0/0:17,0:16:24.07:0,24,291	0/0:10,0:9:5.88:0,6,73	0/0:8,0:8:14.98:0,15,163	./.	0/1:1,2:3:27.24:88,0,27	0/1:23,5:27:99:172,0,551	./.	0/0:10,0:4:12.02:0,12,134	0/0:8,0:6:15.05:0,15,182	0/0:11,0:11:23.80:0,24,291	0/0:7,0:6:15.05:0,15,182	0/0:9,0:9:17.97:0,18,185	0/0:12,0:12:21.06:0,21,254	./.	1/1:3,9:10:27.09:435,27,0	0/0:10,0:10:18.05:0,18,218	0/1:1,6:7:15.33:269,0,15
chr10	35807439	.	T	TC	377.96	PASS	AB=0.923;AC=13;AF=0.929;AN=14;BaseQRankSum=-1.065;DP=377;FS=0.000;HRun=1;HaplotypeScore=14.0743;MQ=8.82;MQ0=258;MQRankSum=0.694;QD=4.91;ReadPosRankSum=-2.361;VQSLOD=-0.5465;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	./.	0/1:11,1:6:3.95:9,0,4	1/1:9,1:2:3.01:45,3,0	./.	1/1:5,0:4:1.32:29,1,0	./.	./.	1/1:12,2:4:12:150,12,0	1/1:6,1:1:3.01:45,3,0	1/1:12,2:3:6.02:89,6,0	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	1/1:14,1:3:8.92:82,9,0	./.
chr10	35811457	.	A	AC	26609.36	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=12.577;DP=731;FS=0.000;HRun=1;HaplotypeScore=138.7346;InbreedingCoeff=0.9990;MQ=73.92;MQ0=0;MQRankSum=-4.807;QD=42.17;ReadPosRankSum=2.642;VQSLOD=4.3174;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,54:57:99:2382,160,0	1/1:0,8:8:21.07:314,21,0	0/0:17,0:17:51.15:0,51,642	0/0:25,0:25:47.03:0,47,863	1/1:1,32:33:90.26:1320,90,0	1/1:0,35:35:99:1528,102,0	1/1:1,20:21:60.20:899,60,0	1/1:3,38:40:99:1773,120,0	1/1:0,27:27:78.26:1169,78,0	1/1:1,20:21:60.20:900,60,0	1/1:1,25:26:72.20:1051,72,0	0/0:15,0:15:42.14:0,42,545	1/1:3,23:26:66.22:989,66,0	1/1:0,21:21:57.19:854,57,0	1/1:1,34:35:93.32:1394,93,0	1/1:0,21:21:63.21:944,63,0	1/1:0,35:35:99:1527,102,0	1/1:1,22:23:63.21:944,63,0	1/1:1,21:22:66.22:989,66,0	1/1:1,19:20:57.15:827,57,0	1/1:1,25:26:69.23:1034,69,0	1/1:1,25:26:75.25:1123,75,0	0/0:21,0:21:60.19:0,60,778	0/0:22,0:22:66.21:0,66,857	1/1:1,24:25:69.23:1034,69,0	1/1:0,39:39:99:1732,117,0	1/1:1,29:30:87.29:1298,87,0	1/1:0,13:13:39.13:584,39,0
chr10	35811794	.	C	CTGT	15666.03	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-5.933;DP=395;FS=0.000;HRun=0;HaplotypeScore=65.7504;InbreedingCoeff=0.9098;MQ=41.56;MQ0=0;MQRankSum=-2.583;QD=44.76;ReadPosRankSum=1.364;VQSLOD=6.2401;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,18:20:41.93:789,42,0	1/1:0,9:10:27.09:577,27,0	0/0:8,0:7:8.24:0,8,114	0/0:5,0:5:14.78:0,15,176	1/1:0,0:31:71.80:723,72,0	1/1:0,17:17:36.12:805,36,0	1/1:0,12:12:24.08:538,24,0	1/1:0,13:14:39.06:661,39,0	1/1:0,0:5:6.01:56,6,0	1/1:0,18:19:54.10:992,54,0	1/1:1,21:22:59.95:1170,60,0	0/0:1,0:12:33.76:0,34,190	1/1:0,5:5:11.83:198,12,0	1/1:0,11:11:24.08:514,24,0	1/1:1,13:14:29.97:671,30,0	1/1:0,0:16:42.09:459,42,0	1/1:0,0:16:33.05:326,33,0	1/1:0,9:9:21.07:468,21,0	1/1:0,14:16:48.07:802,48,0	1/1:0,22:26:68.94:1234,69,0	1/1:0,4:4:6.02:134,6,0	1/1:1,16:19:48.16:987,48,0	0/0:1,0:12:30.55:0,31,149	0/0:2,0:8:21:0,21,119	1/1:0,23:24:69.24:1537,69,0	1/1:1,18:20:54.10:1017,54,0	1/1:0,16:16:36.12:806,36,0	1/1:1,3:4:9.03:202,9,0
chr10	35814762	.	C	CAG	16219.29	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-16.372;DP=679;FS=0.000;HRun=0;HaplotypeScore=81.0399;InbreedingCoeff=0.9987;MQ=77.64;MQ0=3;MQRankSum=-2.929;QD=39.46;ReadPosRankSum=-0.649;VQSLOD=6.3459;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:64,0:64:99:0,156,1991	1/1:1,8:9:21.07:354,21,0	0/0:15,0:15:35.79:0,36,412	0/0:18,0:17:38.56:0,39,437	0/0:28,0:28:75.24:0,75,961	1/1:1,27:29:78.27:1316,78,0	1/1:3,17:20:45.15:752,45,0	1/1:5,28:34:87.27:1409,87,0	0/0:25,0:25:69.22:0,69,888	1/1:6,7:14:24.06:356,24,0	1/1:5,17:22:39.13:657,39,0	0/0:16,0:16:45.15:0,45,579	1/1:4,17:22:51.17:851,51,0	1/1:5,17:22:60.20:996,60,0	1/1:0,24:24:66.23:1114,66,0	0/0:35,0:35:49.91:0,50,1052	0/0:30,0:30:84.25:0,84,1064	1/1:1,27:28:75.26:1265,75,0	1/1:5,10:15:30.10:505,30,0	1/1:2,21:23:60.21:1012,60,0	1/1:3,33:35:84.29:1417,84,0	1/1:2,13:15:30.10:506,30,0	0/0:13,0:13:33.11:0,33,425	0/0:24,0:24:60.19:0,60,771	1/1:2,21:22:57.20:962,57,0	1/1:7,24:32:69.21:1127,69,0	1/1:2,25:27:69.24:1164,69,0	1/1:2,14:15:27.09:456,27,0
chr10	35819511	.	CGTGT	C	309.05	PASS	AB=1.000;AC=10;AF=0.313;AN=32;BaseQRankSum=0.272;DP=516;FS=0.000;HRun=0;HaplotypeScore=103.2532;InbreedingCoeff=0.4976;MQ=59.46;MQ0=10;MQRankSum=-1.619;QD=2.47;ReadPosRankSum=1.189;VQSLOD=1.3163;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:28:0:0,0,0	./.	./.	./.	./.	0/0:9,0:9:0.47:0,0,1	0/1:22,0:22:0.20:0,0,0	0/0:29,0:27:1.25:0,1,3	1/1:16,4:22:4.26:163,4,0	0/0:15,0:15:0.94:0,1,2	./.	0/0:16,0:22:17.75:0,18,184	./.	0/0:17,0:17:2.15:0,2,7	1/1:25,0:25:3:28,3,0	1/1:18,5:24:5.52:187,6,0	0/0:15,0:20:20.37:0,20,130	./.	./.	0/1:14,0:14:0:0,0,0	./.	./.	0/0:17,0:17:15.05:0,15,296	0/0:20,0:23:14.68:0,15,236	./.	./.	1/1:18,0:17:2.83:28,3,0	0/0:19,0:18:0:0,0,0
chr10	35819565	.	TGC	T	1927.93	PASS	AB=1.000;AC=31;AF=0.596;AN=52;BaseQRankSum=-3.406;DP=445;FS=35.627;HRun=0;HaplotypeScore=86.4090;InbreedingCoeff=0.6982;MQ=45.73;MQ0=25;MQRankSum=0.519;QD=8.49;ReadPosRankSum=1.568;VQSLOD=1.6723;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:22:17.91:0,18,138	1/1:4,0:4:11.98:99,12,0	0/0:39,0:5:14.82:0,15,115	0/0:48,0:8:20.47:0,20,146	0/0:11,0:11:17.82:0,18,137	1/1:15,0:14:14.93:123,15,0	1/1:12,0:12:14.94:119,15,0	1/1:2,14:14:41.77:320,42,0	0/0:21,0:21:6.40:0,6,98	1/1:8,9:17:42.96:315,43,0	1/1:7,0:7:8.99:75,9,0	0/0:18,0:18:3.65:0,4,83	./.	1/1:14,0:14:2.89:18,3,0	1/1:20,0:20:3.89:31,4,0	0/0:18,0:18:12.18:0,12,86	0/1:18,0:16:3.03:3,0,74	./.	1/1:2,7:9:23.83:176,24,0	1/1:11,0:11:8.70:58,9,0	0/1:15,0:14:6.78:76,0,7	0/1:12,0:10:0:0,0,0	0/0:11,0:11:15:0,15,217	0/0:16,0:15:21.05:0,21,236	1/1:20,0:20:23.89:206,24,0	1/1:16,0:15:44.74:348,45,0	1/1:14,0:14:2.94:29,3,0	1/1:7,0:6:17.78:121,18,0
chr10	35821625	.	AGAAT	A	11482.50	PASS	AB=0.958;AC=47;AF=0.839;AN=56;BaseQRankSum=7.825;DP=728;FS=16.504;HRun=0;HaplotypeScore=137.7374;InbreedingCoeff=0.8024;MQ=65.94;MQ0=4;MQRankSum=-0.037;QD=17.67;ReadPosRankSum=0.219;VQSLOD=3.7353;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:49:29.51:254,30,0	1/1:4,12:16:22.72:376,23,0	0/0:16,0:13:9.02:0,9,105	0/0:14,0:13:3.01:0,3,31	1/1:8,0:21:24.03:221,24,0	1/1:2,12:14:21.07:331,21,0	1/1:13,12:25:18.06:284,18,0	1/1:35,0:35:29.95:308,30,0	1/1:6,0:14:24.02:221,24,0	1/1:6,23:29:69.22:1067,69,0	1/1:6,13:19:39.13:616,39,0	0/1:22,1:23:11.26:11,0,652	1/1:5,24:29:39.13:616,39,0	1/1:8,16:24:33.11:521,33,0	1/1:9,14:23:15.05:237,15,0	1/1:11,0:37:57.07:531,57,0	1/1:14,0:28:24.03:223,24,0	1/1:8,18:26:42.14:654,42,0	1/1:23,16:38:45.04:648,45,0	1/1:8,23:30:59.98:833,60,0	1/1:6,19:24:30.10:473,30,0	1/1:13,16:29:38.89:552,39,0	0/0:28,0:28:54.14:0,54,1127	0/0:20,0:20:30.09:0,30,659	1/1:20,10:30:30.10:473,30,0	1/1:17,17:33:45.15:708,45,0	1/1:9,17:26:36.12:568,36,0	1/1:6,18:24:48.16:758,48,0
chr10	35823957	.	TAC	T	16374.43	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=13.803;DP=649;FS=3.696;HRun=0;HaplotypeScore=82.0207;InbreedingCoeff=0.9977;MQ=65.05;MQ0=2;MQRankSum=-0.923;QD=40.73;ReadPosRankSum=0.492;VQSLOD=6.2974;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,144,2708	1/1:1,11:12:30.10:459,30,0	0/0:16,0:15:36.15:0,36,734	0/0:12,0:12:26.74:0,27,461	0/0:23,0:23:69.24:0,69,1323	1/1:0,22:22:54.18:826,54,0	1/1:0,20:20:51.17:780,51,0	1/1:1,39:40:99:1681,114,0	0/0:22,1:23:20.33:0,20,1160	1/1:1,20:21:57.17:830,57,0	1/1:0,29:30:78.26:1193,78,0	0/0:25,0:25:75.26:0,75,1439	1/1:0,19:19:54.18:826,54,0	1/1:1,14:15:36.12:551,36,0	1/1:0,23:23:60.20:918,60,0	0/0:21,0:21:63.19:0,63,1181	0/0:30,0:30:87.27:0,87,1616	1/1:2,23:25:63.13:964,63,0	1/1:2,13:13:39.06:545,39,0	1/1:0,26:26:75.25:1139,75,0	1/1:0,28:28:72.24:1093,72,0	1/1:0,19:19:57.19:872,57,0	0/0:25,0:25:72.23:0,72,1345	0/0:22,0:22:63.22:0,63,1212	1/1:0,16:16:39.13:597,39,0	1/1:1,28:29:29.33:1226,29,0	1/1:1,35:36:99:1599,105,0	1/1:0,6:6:18.06:275,18,0
chr10	35824460	.	A	AT	4559.96	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=-9.471;DP=601;FS=16.032;HRun=9;HaplotypeScore=67.2671;InbreedingCoeff=0.8921;MQ=81.63;MQ0=0;MQRankSum=-0.001;QD=21.11;ReadPosRankSum=2.187;VQSLOD=4.0634;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,33:37:78.04:844,78,0	0/0:3,0:3:6:0,6,52	0/0:34,0:26:46.05:0,46,346	0/1:33,0:27:39.45:39,0,144	1/1:2,27:29:78.11:829,78,0	0/0:24,0:24:65.97:0,66,569	0/0:13,0:13:32.01:0,32,263	0/0:21,1:22:35.93:0,36,310	1/1:3,15:18:33.09:365,33,0	0/0:23,0:23:65.98:0,66,570	0/0:23,0:23:53.96:0,54,464	1/1:1,20:21:51.10:551,51,0	0/0:16,0:16:44.95:0,45,382	0/0:21,1:22:20.81:0,21,410	0/0:30,0:30:83.96:0,84,724	1/1:4,19:23:19.07:439,19,0	1/1:1,29:30:75.20:830,75,0	0/0:14,0:14:35.99:0,36,313	0/0:17,0:17:32.93:0,33,278	0/0:22,0:22:56.97:0,57,495	0/0:20,1:21:11.78:0,12,331	0/0:21,0:21:56.99:0,57,494	1/1:1,11:12:29.91:332,30,0	1/1:1,12:13:30.08:332,30,0	0/0:15,0:15:41.99:0,42,364	0/0:24,0:24:68.98:0,69,599	0/0:19,0:17:47.95:0,48,413	0/0:21,0:22:59.03:0,59,501
chr10	35824703	.	TTCTCTCTCTCTCTC	T	3443.60	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=7.378;DP=656;FS=3.166;HRun=0;HaplotypeScore=231.2829;InbreedingCoeff=0.9006;MQ=70.23;MQ0=13;MQRankSum=-8.644;QD=44.15;ReadPosRankSum=3.148;VQSLOD=3.1278;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:34:42.59:0,43,1990	0/0:9,0:9:9.03:0,9,565	0/0:16,0:11:3.01:0,3,40	0/0:41,0:24:11.47:0,11,134	1/1:6,4:10:11.99:121,12,0	0/0:15,0:24:27.09:0,27,1681	0/0:17,0:23:27.09:0,27,1497	0/0:42,0:42:43.38:0,43,1701	1/1:8,12:21:36.12:1055,36,0	0/0:14,0:19:45.15:0,45,2462	0/0:8,0:14:12.04:0,12,471	0/0:21,0:31:51.18:0,51,2674	0/0:13,0:22:52.37:0,52,2562	0/0:21,0:33:36.12:0,36,1740	0/0:15,0:21:30.10:0,30,1636	1/1:8,19:27:53.82:1837,54,0	1/1:13,7:20:15.05:431,15,0	0/0:15,0:26:42.14:0,42,2237	0/0:17,0:17:15.05:0,15,939	0/0:15,0:19:24.08:0,24,1177	0/0:19,0:25:36.11:0,36,1493	0/0:26,0:26:40.78:0,41,2470	0/0:11,0:14:17.95:0,18,978	0/0:12,0:22:27.09:0,27,1271	0/0:12,0:16:27.09:0,27,1321	0/0:13,0:22:42.14:0,42,2270	0/0:24,0:28:42.14:0,42,2120	0/0:23,0:27:42.10:0,42,1529
chr10	35829362	.	G	GTTC	34359.07	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-8.964;DP=742;FS=29.215;HRun=0;HaplotypeScore=96.5504;InbreedingCoeff=0.9959;MQ=73.02;MQ0=0;MQRankSum=-8.438;QD=52.86;ReadPosRankSum=1.736;VQSLOD=3.8371;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,150,2374	1/1:3,9:12:33.11:684,33,0	0/0:18,0:18:42.14:0,42,670	0/0:20,0:19:51.11:0,51,714	1/1:7,22:30:60.20:1233,60,0	1/1:0,27:27:75.26:1642,75,0	1/1:2,17:20:51.17:1085,51,0	1/1:9,22:31:75.23:1572,75,0	1/1:1,22:23:63.22:1362,63,0	1/1:4,24:30:84.25:1749,84,0	1/1:5,6:11:27.08:468,27,0	1/1:5,30:35:90.31:1958,90,0	1/1:5,19:25:63.22:1330,63,0	1/1:5,25:30:72.25:1525,72,0	1/1:3,29:33:84.29:1775,84,0	1/1:6,27:33:81.28:1734,81,0	1/1:5,26:32:69.24:1493,69,0	1/1:5,21:26:57.19:1255,57,0	1/1:5,12:16:48.16:1057,48,0	1/1:2,18:20:57.19:1198,57,0	1/1:5,43:49:99:2224,105,0	1/1:2,22:25:69.24:1439,69,0	1/1:2,23:25:75.26:1596,75,0	1/1:3,11:16:24.08:500,24,0	1/1:3,15:18:36.12:753,36,0	1/1:5,39:44:99:2639,120,0	1/1:2,26:29:78.27:1691,78,0	1/1:1,6:8:18.06:396,18,0
chr10	35830694	.	C	CT	4316.79	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-13.119;DP=778;FS=3.499;HRun=1;HaplotypeScore=74.8950;InbreedingCoeff=0.9994;MQ=83.07;MQ0=0;MQRankSum=-0.987;QD=40.72;ReadPosRankSum=3.016;VQSLOD=5.6227;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,147,1873	0/0:9,0:9:24.08:0,24,311	0/0:19,0:19:56.54:0,57,615	0/0:24,0:24:69.01:0,69,781	1/1:0,18:19:50.87:745,51,0	0/0:15,0:15:45.15:0,45,583	0/0:18,0:18:54.12:0,54,645	0/0:33,0:33:99:0,99,1238	1/1:0,21:21:54.18:799,54,0	0/0:38,0:38:99:0,108,1366	0/0:26,0:26:75.22:0,75,934	0/0:29,0:29:84.22:0,84,1043	0/0:31,0:31:90.28:0,90,1152	0/0:25,0:25:75.21:0,75,934	0/0:39,0:39:99:0,111,1408	1/1:0,40:40:99:1751,120,0	1/1:2,24:26:69.23:1021,69,0	0/0:12,0:12:36.10:0,36,451	0/0:26,0:26:69.20:0,69,862	0/0:31,0:31:87.27:0,87,1111	0/0:41,0:41:99:0,117,1443	0/0:27,0:27:78.16:0,78,913	0/0:26,0:26:75.16:0,75,895	0/0:42,0:42:99:0,126,1573	0/0:20,0:20:57.15:0,57,709	0/0:37,0:37:99:0,105,1314	0/0:29,0:28:87.24:0,87,1094	0/0:22,0:22:66.18:0,66,826
chr10	35832101	.	ACCTACCTT	A	10337.36	PASS	AB=1.000;AC=39;AF=0.696;AN=56;BaseQRankSum=-4.430;DP=676;FS=8.295;HRun=0;HaplotypeScore=193.9037;InbreedingCoeff=0.7416;MQ=59.01;MQ0=7;MQRankSum=-0.407;QD=22.09;ReadPosRankSum=-2.394;VQSLOD=3.1392;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:44:93.41:0,93,2643	1/1:5,2:7:14.74:161,15,0	0/0:21,0:18:46.36:0,46,755	0/0:24,0:20:41.68:0,42,527	0/0:18,0:18:23.42:0,23,815	1/1:3,19:22:17.20:238,17,0	1/1:1,27:27:17.73:174,18,0	1/1:5,31:34:89.85:949,90,0	0/0:41,0:40:73.08:0,73,2403	1/1:3,24:26:71.71:1348,72,0	1/1:9,0:9:23.63:405,24,0	0/1:30,0:30:12.81:13,0,1439	1/1:14,1:15:11.97:160,12,0	1/1:25,4:28:44.53:643,45,0	1/1:27,7:34:56.02:836,56,0	0/0:33,0:33:85.97:0,86,1999	0/0:25,0:25:10.02:0,10,1461	1/1:17,1:18:26.97:300,27,0	1/1:13,2:11:29.94:463,30,0	1/1:9,3:12:22.10:426,22,0	1/1:51,2:51:67.11:1623,67,0	1/1:16,6:22:47.92:736,48,0	0/1:16,0:16:7.90:8,0,775	0/1:30,0:30:16.84:17,0,1459	1/1:6,14:20:15.99:259,16,0	1/1:19,1:19:39.93:767,40,0	1/1:14,5:19:36.34:559,36,0	1/1:2,4:6:13.86:254,14,0
chr10	35832131	.	CTTCT	C	3427.87	PASS	AB=0.820;AC=28;AF=0.500;AN=56;BaseQRankSum=10.559;DP=792;FS=1.549;HRun=0;HaplotypeScore=199.8165;InbreedingCoeff=-0.0773;MQ=51.67;MQ0=29;MQRankSum=2.805;QD=6.00;ReadPosRankSum=-1.510;VQSLOD=2.5310;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:44:50:0,50,539	0/1:2,5:7:9.92:35,0,10	0/0:48,0:7:17.95:0,18,271	0/0:38,0:6:17.55:0,18,238	0/1:17,3:20:60.47:60,0,314	1/1:20,2:22:18.26:121,18,0	0/1:33,4:35:30.78:192,0,31	0/0:39,0:31:43.81:0,44,320	0/1:37,1:37:61.33:61,0,898	1/1:25,2:25:41.87:309,42,0	0/1:10,1:11:0.75:101,0,1	0/1:32,0:32:38.96:39,0,920	1/1:1,17:18:11.73:89,12,0	0/1:9,24:32:34.75:157,0,35	1/1:9,25:34:38.68:313,39,0	0/1:34,4:38:99:142,0,847	0/1:26,5:31:99:139,0,608	0/1:5,22:26:14.77:92,0,15	0/1:20,1:19:99:118,0,132	0/1:6,9:14:18.14:108,0,18	0/1:52,4:54:77.49:381,0,77	1/1:22,5:27:30.32:320,30,0	0/0:16,4:20:45.46:0,45,618	0/0:29,0:29:38.84:0,39,1146	0/1:19,1:20:8.67:96,0,9	0/1:8,15:21:9.38:202,0,9	1/1:6,18:24:38.51:299,39,0	0/1:9,1:10:5.30:52,0,5
chr10	35832396	.	A	ACC	4179.17	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-10.069;DP=721;FS=0.000;HRun=7;HaplotypeScore=87.1284;InbreedingCoeff=0.9910;MQ=84.77;MQ0=0;MQRankSum=-1.274;QD=37.99;ReadPosRankSum=0.752;VQSLOD=3.1358;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,123,1411	0/0:17,0:17:39.04:0,39,437	0/0:22,0:22:48.31:0,48,587	0/0:23,2:25:11.83:0,12,586	1/1:2,25:28:77.58:1118,78,0	0/0:22,0:22:54.12:0,54,615	0/0:28,0:28:60.14:0,60,688	0/0:29,0:29:57.13:0,57,653	1/1:0,27:28:69.24:1132,69,0	0/0:17,0:16:36.10:0,36,419	0/0:17,0:17:48.12:0,48,539	0/0:32,0:32:84.10:0,84,942	0/0:25,0:25:72.21:0,72,838	0/0:29,0:29:72.19:0,72,838	0/0:24,0:24:63.09:0,63,687	1/1:1,28:29:66.04:1083,66,0	1/1:2,22:25:53.67:846,54,0	0/0:15,0:15:42.12:0,42,489	0/0:20,0:20:45.13:0,45,524	0/0:15,0:15:45.13:0,45,523	0/0:46,0:46:99:0,123,1433	0/0:18,0:18:54.13:0,54,616	0/0:23,0:23:69.19:0,69,790	0/0:28,0:28:81.24:0,81,943	0/0:22,0:22:57.14:0,57,653	0/0:35,0:35:96.27:0,96,1117	0/0:32,0:32:87.25:0,87,1009	0/0:15,0:15:45.13:0,45,524
chr10	35839063	.	CA	C	1972.43	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.208;DP=738;FS=3.112;HRun=3;HaplotypeScore=68.8872;InbreedingCoeff=0.9998;MQ=97.93;MQ0=0;MQRankSum=-3.244;QD=31.31;ReadPosRankSum=1.261;VQSLOD=3.9047;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:75.23:0,75,1056	0/0:10,0:10:30.10:0,30,432	0/0:37,0:37:99:0,102,1386	0/0:38,0:38:99:0,105,1471	0/0:29,0:29:87.29:0,87,1252	0/0:21,0:21:63.21:0,63,906	0/0:24,0:24:69.22:0,69,975	0/0:41,0:41:99:0,120,1727	0/0:24,0:24:69.23:0,69,994	0/0:29,0:29:81.27:0,81,1152	0/0:23,0:23:66.20:0,66,914	1/1:1,25:26:72.23:893,72,0	0/0:28,0:28:84.28:0,84,1208	0/0:21,0:21:63.21:0,63,907	0/0:33,0:33:96.31:0,96,1362	0/0:38,0:38:99:0,111,1599	0/0:38,0:38:99:0,114,1638	0/0:26,0:26:75.24:0,75,1062	0/0:15,0:15:45.13:0,45,627	0/0:27,0:27:78.22:0,78,1065	0/0:32,0:32:96.32:0,96,1381	0/0:22,0:22:57.19:0,57,821	1/1:1,19:20:54.16:665,54,0	1/1:2,15:17:45.14:558,45,0	0/0:20,0:20:60.19:0,60,846	0/0:37,0:37:99:0,105,1494	0/0:20,0:20:60.20:0,60,863	0/0:15,0:15:42.12:0,42,583
chr10	35839411	.	A	AT	4224.99	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=5.071;DP=894;FS=2.320;HRun=1;HaplotypeScore=91.2253;InbreedingCoeff=0.9992;MQ=79.57;MQ0=0;MQRankSum=-2.575;QD=43.11;ReadPosRankSum=1.734;VQSLOD=4.8941;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,150,1932	0/0:12,0:12:36.12:0,36,467	0/0:37,0:37:99:0,99,1281	0/0:33,0:33:75.77:0,76,1108	0/0:30,0:29:90.28:0,90,1153	0/0:25,0:25:75.24:0,75,973	0/0:37,0:37:99:0,108,1372	0/0:32,0:32:93.30:0,93,1208	0/0:51,0:51:99:0,153,1985	0/0:32,0:32:96.30:0,96,1235	0/0:17,0:17:51.15:0,51,648	1/1:1,37:38:99:1529,102,0	0/0:42,0:42:99:0,120,1543	0/0:40,0:40:99:0,117,1519	0/0:55,0:54:99:0,163,2087	0/0:37,0:37:99:0,105,1363	0/0:19,0:19:54.18:0,54,701	0/0:21,0:21:54.14:0,54,683	0/0:16,0:16:48.16:0,48,623	0/0:24,0:24:69.21:0,69,878	0/0:74,0:74:99:0,214,2733	0/0:19,0:19:54.18:0,54,701	1/1:0,26:26:78.26:1168,78,0	1/1:0,34:34:99:1528,102,0	0/0:24,0:24:72.23:0,72,935	0/0:40,0:40:99:0,120,1545	0/0:19,0:19:57.19:0,57,739	0/0:10,0:10:24.08:0,24,312
chr10	35839621	.	T	TA	1856.97	PASS	AB=0.563;AC=7;AF=0.125;AN=56;BaseQRankSum=-6.324;DP=683;FS=0.000;HRun=12;HaplotypeScore=81.1142;InbreedingCoeff=0.7589;MQ=70.20;MQ0=2;MQRankSum=1.243;QD=15.10;ReadPosRankSum=0.609;VQSLOD=4.3265;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:34:85.46:0,85,618	0/0:13,0:13:14.32:0,14,182	0/0:29,0:23:7.39:0,7,115	0/0:13,0:9:12.41:0,12,75	1/1:6,24:30:28.17:566,28,0	0/0:22,1:23:18.18:0,18,288	0/0:27,0:28:70.60:0,71,509	0/0:33,0:33:53.45:0,53,386	0/1:6,20:27:11.58:372,0,12	0/0:31,3:35:6.19:0,6,363	0/0:20,0:21:46.71:0,47,331	0/0:23,0:23:24.91:0,25,303	0/0:19,0:20:40.73:0,41,288	0/0:21,0:21:50.84:0,51,366	0/0:31,0:32:79.19:0,79,561	1/1:8,22:30:53.92:511,54,0	1/1:6,30:36:41.18:557,41,0	0/0:13,0:14:34.79:0,35,244	0/0:13,0:14:37.80:0,38,267	0/0:44,1:48:62.13:0,62,609	0/0:19,0:19:38.74:0,39,284	0/0:25,0:25:42.54:0,43,307	0/0:22,0:22:44.61:0,45,323	0/0:3,0:3:5.96:0,6,44	0/0:20,0:20:50.64:0,51,367	0/0:26,1:30:21.46:0,21,290	0/0:29,0:29:65.13:0,65,481	0/0:11,0:11:23.85:0,24,175
chr10	35842358	.	GGTGT	G	1740.74	PASS	AB=0.944;AC=36;AF=0.692;AN=52;BaseQRankSum=1.387;DP=596;FS=1.644;HRun=0;HaplotypeScore=104.2278;InbreedingCoeff=0.5814;MQ=69.94;MQ0=5;MQRankSum=-0.771;QD=4.77;ReadPosRankSum=-0.654;VQSLOD=2.2923;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:37:9.46:0,9,112	1/1:4,3:7:6.49:94,6,0	./.	./.	0/0:20,0:21:8.95:0,9,153	1/1:13,2:17:8.57:120,9,0	1/1:18,2:20:6.05:93,6,0	1/1:24,0:24:2.90:19,3,0	0/0:22,0:22:20.79:0,21,345	1/1:11,9:20:14.41:185,14,0	1/1:10,4:14:7.79:71,8,0	0/1:14,0:16:3.51:65,0,4	1/1:12,3:15:3.01:47,3,0	1/1:19,5:24:9.50:141,10,0	1/1:15,5:21:9.02:121,9,0	0/0:20,0:29:20.41:0,20,393	0/0:27,0:27:32.86:0,33,499	1/1:13,3:16:8.94:110,9,0	1/1:24,2:26:6.89:72,7,0	1/1:17,1:18:6.48:76,6,0	1/1:30,1:31:5.81:58,6,0	1/1:20,1:21:8.98:112,9,0	0/0:14,0:19:5.49:0,5,25	0/0:19,0:28:16.61:0,17,132	1/1:13,9:23:11.04:285,11,0	1/1:31,1:33:4.78:142,5,0	1/1:11,3:13:6.02:93,6,0	0/1:3,0:3:11.97:12,0,14
chr10	35843119	.	C	CTT	1138.77	PASS	AB=0.708;AC=12;AF=0.214;AN=56;BaseQRankSum=7.675;DP=476;FS=1.600;HRun=12;HaplotypeScore=70.0809;InbreedingCoeff=0.5575;MQ=68.50;MQ0=0;MQRankSum=-0.443;QD=7.69;ReadPosRankSum=-0.134;VQSLOD=0.5765;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:41.98:0,42,383	0/0:9,0:9:17.95:0,18,167	0/0:10,1:5:5.93:0,6,43	0/0:10,0:10:1.55:0,2,33	1/1:7,0:26:12.75:110,13,0	0/0:22,0:22:57:0,57,527	0/0:9,0:9:24.03:0,24,222	0/0:26,0:29:54.38:0,54,508	0/1:6,0:16:4.69:46,0,5	0/0:21,0:22:52.58:0,53,494	0/1:18,1:20:3.23:3,0,336	1/1:3,14:18:33.06:426,33,0	0/0:20,0:21:47.85:0,48,431	0/0:9,0:9:14.98:0,15,139	0/0:16,0:16:45.01:0,45,411	0/1:7,0:12:15.72:16,0,17	0/1:9,0:27:36.83:83,0,37	0/0:11,0:11:20.97:0,21,194	0/0:14,0:14:17.89:0,18,166	0/0:30,0:30:78.01:0,78,707	0/0:4,0:4:5.94:0,6,55	0/0:14,0:15:41.78:0,42,373	1/1:5,13:20:33.05:411,33,0	1/1:1,7:9:15.52:211,16,0	0/0:26,0:29:59.67:0,60,539	0/0:17,0:17:42.01:0,42,388	0/0:19,0:21:29.67:0,30,324	0/0:8,0:8:23.93:0,24,210
chr10	35844450	.	A	ATG	5854.71	PASS	AB=0.706;AC=31;AF=0.554;AN=56;BaseQRankSum=-7.856;DP=768;FS=5.523;HRun=0;HaplotypeScore=97.7107;InbreedingCoeff=-0.2770;MQ=58.01;MQ0=16;MQRankSum=0.179;QD=8.53;ReadPosRankSum=-1.392;VQSLOD=3.8387;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:26,19:42:46.64:210,0,47	1/1:3,3:6:3.01:46,3,0	0/0:14,0:11:3.01:0,3,34	0/0:19,0:13:6.01:0,6,60	1/1:12,0:30:3:26,3,0	0/1:14,9:24:78.48:204,0,78	0/1:21,0:23:0.90:1,0,268	1/1:26,0:26:24.06:309,24,0	0/1:12,0:39:10.82:66,0,11	1/1:15,13:26:2.29:409,2,0	1/1:4,14:17:15.05:231,15,0	0/1:13,0:31:0.21:0,0,182	0/1:20,7:27:17.94:489,0,18	0/1:9,10:18:18.66:170,0,19	0/1:15,24:39:62.39:593,0,62	1/1:15,0:31:3:26,3,0	0/1:8,0:28:6.17:20,0,6	0/1:16,13:29:99:300,0,116	0/1:27,6:32:15.96:373,0,16	0/1:8,9:14:26.12:125,0,26	0/1:19,22:40:35.31:379,0,35	0/1:8,11:19:29.67:197,0,30	0/0:12,0:23:4.95:0,5,73	0/0:8,0:26:29.06:0,29,171	0/1:9,15:24:95.14:370,0,95	1/1:14,21:31:46.86:613,47,0	0/1:19,25:45:85.93:508,0,86	0/1:9,9:18:8.96:191,0,9
chr10	35844478	.	GTC	G	1102.64	PASS	AB=0.952;AC=18;AF=0.321;AN=56;BaseQRankSum=0.679;DP=686;FS=11.950;HRun=0;HaplotypeScore=96.6957;InbreedingCoeff=-0.0522;MQ=54.55;MQ0=31;MQRankSum=2.178;QD=2.78;ReadPosRankSum=-0.827;VQSLOD=0.5283;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,5:34:28.46:0,28,320	0/0:7,0:7:15:0,15,149	0/0:20,0:4:12:0,12,112	0/0:26,0:9:14.29:0,14,177	1/1:21,0:21:11.20:131,11,0	0/0:21,1:21:38.62:0,39,420	0/0:22,0:22:36.89:0,37,613	0/1:20,7:25:99:182,0,285	0/1:25,0:25:42.90:69,0,43	0/1:17,0:17:99:113,0,339	0/0:19,1:19:26.74:0,27,220	0/1:32,0:29:99:115,0,187	0/1:18,4:21:60.37:60,0,383	0/0:18,0:17:12.06:0,12,315	0/0:34,1:34:52.01:0,52,534	1/1:18,0:18:6.21:94,6,0	1/1:21,0:20:4.38:98,4,0	0/0:30,1:30:59.95:0,60,600	0/1:23,3:25:69.75:70,0,369	0/0:15,0:12:25.26:0,25,268	0/1:38,2:38:29.46:29,0,422	0/0:18,0:18:31.55:0,32,317	0/1:17,0:17:41.64:66,0,42	0/1:35,0:35:57.23:57,0,299	0/1:24,0:24:29.03:29,0,496	0/1:27,2:25:99:104,0,406	0/1:42,0:42:54.70:55,0,534	0/0:16,0:16:26.18:0,26,267
chr10	35845267	.	CGT	C	1500.62	PASS	AB=0.781;AC=10;AF=0.179;AN=56;BaseQRankSum=6.419;DP=793;FS=3.988;HRun=0;HaplotypeScore=167.1899;InbreedingCoeff=0.5014;MQ=50.84;MQ0=13;MQRankSum=1.177;QD=7.58;ReadPosRankSum=0.263;VQSLOD=3.2121;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:9,1:46:8.21:0,8,83	0/0:8,0:8:24.08:0,24,451	0/0:16,3:9:19.30:0,19,317	0/1:23,2:11:10.07:10,0,370	0/0:15,7:22:30.08:0,30,371	0/0:19,0:19:18.06:0,18,326	0/0:46,0:44:99:0,111,1874	0/0:28,0:27:75.07:0,75,1218	0/1:18,9:27:53.44:53,0,130	0/0:31,0:30:84.08:0,84,1522	0/0:20,0:20:23.80:0,24,383	1/1:24,9:33:44.04:606,44,0	0/0:27,0:26:40.09:0,40,854	0/0:25,0:25:38.84:0,39,688	0/0:28,0:28:29.99:0,30,550	0/1:18,13:30:77.38:77,0,437	0/1:17,7:24:99:160,0,371	0/0:20,0:19:48.02:0,48,799	0/0:21,0:17:51.14:0,51,907	0/0:26,0:25:29.57:0,30,494	0/0:83,0:81:99:0,183,3194	0/0:28,0:27:32.39:0,32,596	1/1:7,5:12:16.60:211,17,0	1/1:38,7:45:54.44:544,54,0	0/0:20,0:20:39.11:0,39,702	0/0:43,0:43:99:0,113,1814	0/0:26,0:24:37.01:0,37,603	0/0:9,0:9:17.26:0,17,194
chr10	35845269	.	T	TACAC	1178.16	PASS	AB=0.727;AC=13;AF=0.232;AN=56;BaseQRankSum=5.658;DP=817;FS=4.775;HRun=0;HaplotypeScore=195.5367;InbreedingCoeff=0.7566;MQ=50.48;MQ0=16;MQRankSum=2.018;QD=5.83;ReadPosRankSum=-1.644;VQSLOD=2.4260;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:10.38:0,10,66	0/0:9,0:9:17.73:0,18,274	0/0:19,0:9:13.83:0,14,154	0/0:31,0:10:13.74:0,14,153	1/1:21,1:23:12.97:238,13,0	0/0:17,0:17:11.94:0,12,217	0/0:46,0:44:99:0,99,1201	0/0:31,0:30:53.72:0,54,766	1/1:19,1:27:13.08:181,13,0	0/0:30,0:29:63.62:0,64,838	0/0:22,0:22:20.91:0,21,314	1/1:34,0:34:4.46:173,4,0	0/0:27,0:26:3.42:0,3,575	0/0:27,0:27:29.85:0,30,441	0/0:28,0:28:17.93:0,18,293	1/1:24,2:29:7.10:313,7,0	0/1:20,7:32:2.18:347,0,2	0/0:20,0:19:46.30:0,46,557	0/0:21,0:17:41.97:0,42,555	0/0:26,0:25:18.06:0,18,310	0/0:86,0:84:99:0,164,2037	0/0:29,0:28:20.89:0,21,328	1/1:12,0:12:5.85:35,6,0	1/1:44,0:44:4.51:55,5,0	0/0:20,0:20:29.61:0,30,481	0/0:43,0:43:99:0,101,1128	0/0:26,0:24:9.76:0,10,261	0/0:9,0:9:7.57:0,8,113
chr10	35845273	.	CACGT	C	3460.05	PASS	AB=0.969;AC=27;AF=0.482;AN=56;BaseQRankSum=5.736;DP=826;FS=3.209;HRun=0;HaplotypeScore=179.2404;InbreedingCoeff=-0.4807;MQ=50.86;MQ0=17;MQRankSum=-0.334;QD=4.71;ReadPosRankSum=-2.764;VQSLOD=2.4245;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:43,3:46:9.64:175,10,0	0/1:9,0:9:24.66:25,0,203	0/0:20,0:9:12.73:0,13,214	0/1:35,0:10:27.53:28,0,147	0/1:23,0:23:5.60:286,0,6	0/0:17,0:17:11.96:0,12,189	0/1:47,2:47:39.71:40,0,772	0/1:28,3:30:99:197,0,338	1/1:25,1:26:13.50:187,14,0	0/1:30,1:30:99:134,0,860	0/1:19,2:21:89.18:89,0,274	0/1:34,0:34:58.71:305,0,59	0/1:26,1:26:81.05:81,0,488	0/1:27,0:27:9.53:10,0,401	0/1:25,1:26:40.01:40,0,199	1/1:31,0:30:12.95:381,13,0	0/1:33,0:33:29.67:348,0,30	0/1:17,3:19:73.24:73,0,481	0/1:22,0:18:99:104,0,261	0/0:23,3:25:23.94:0,24,343	0/1:85,4:87:56.22:56,0,1432	0/0:27,1:27:15.85:0,16,356	0/1:13,0:13:4.26:165,0,4	0/1:43,0:43:99:160,0,128	0/1:17,1:18:24.92:25,0,396	0/1:47,2:49:99:504,0,624	0/1:22,2:22:26.38:26,0,338	0/1:8,0:8:19.97:20,0,141
chr10	35845275	.	CGT	C	6930.44	PASS	AB=0.856;AC=30;AF=0.536;AN=56;BaseQRankSum=7.253;DP=821;FS=6.246;HRun=0;HaplotypeScore=149.2420;InbreedingCoeff=-0.0168;MQ=50.31;MQ0=16;MQRankSum=1.224;QD=10.21;ReadPosRankSum=2.221;VQSLOD=4.2228;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:46,1:47:12.64:99,13,0	0/1:7,1:8:28.27:28,0,189	0/0:19,0:9:15.08:0,15,194	0/1:30,1:7:28.59:29,0,106	1/1:16,7:23:27.75:362,28,0	0/0:18,0:18:12.04:0,12,189	0/1:26,24:48:99:605,0,702	0/1:19,12:30:99:347,0,351	1/1:18,8:26:19.39:243,19,0	0/1:30,0:30:99:278,0,720	0/1:21,0:21:21.32:21,0,243	1/1:29,4:33:45.84:648,46,0	0/1:26,1:26:15.85:16,0,460	0/0:27,1:28:13.77:0,14,376	0/1:25,0:25:6.07:6,0,199	1/1:22,11:32:50.24:603,50,0	1/1:25,7:32:37.08:457,37,0	0/1:13,8:20:99:209,0,369	0/1:14,8:18:99:323,0,261	0/0:26,0:25:26.03:0,26,296	0/1:49,39:86:99:778,0,1198	0/0:27,0:26:9.27:0,9,286	1/1:11,2:13:16.43:213,16,0	1/1:39,3:42:46.52:463,47,0	0/1:18,0:18:33.46:33,0,359	0/1:18,29:47:99:1160,0,494	0/0:24,0:22:7.37:0,7,272	0/1:10,0:10:10.45:10,0,106
chr10	35845277	.	T	TACACAC	8579.46	PASS	AB=0.863;AC=47;AF=0.870;AN=54;BaseQRankSum=-4.320;DP=861;FS=0.966;HRun=0;HaplotypeScore=200.6272;InbreedingCoeff=0.2467;MQ=50.32;MQ0=17;MQRankSum=0.951;QD=10.85;ReadPosRankSum=-2.330;VQSLOD=3.1744;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:48,0:48:11.98:97,12,0	1/1:9,0:9:3.48:47,3,0	0/0:18,0:8:3.49:0,3,59	0/0:31,0:7:2.27:0,2,36	1/1:21,0:21:5.31:41,5,0	./.	1/1:44,0:44:12.56:845,13,0	1/1:32,0:31:45.02:518,45,0	1/1:25,0:26:18.03:207,18,0	1/1:14,21:36:60.16:1041,60,0	1/1:8,13:23:5.98:48,6,0	1/1:33,0:33:7.06:313,7,0	1/1:20,8:27:9:103,9,0	1/1:11,16:35:8.98:116,9,0	1/1:8,19:27:2.65:24,3,0	1/1:34,0:33:28.59:335,29,0	1/1:34,0:34:14.38:343,14,0	0/1:21,0:21:24.53:396,0,25	1/1:24,0:19:30.10:455,30,0	0/1:13,16:30:0.10:0,0,1	1/1:88,0:89:87.04:1553,87,0	1/1:6,19:27:2.31:33,2,0	1/1:13,0:13:8.31:80,8,0	0/1:41,0:41:10.06:106,0,10	1/1:11,7:20:9.01:161,9,0	1/1:49,0:50:99:1493,101,0	1/1:9,15:26:9.29:178,9,0	1/1:3,7:11:3.01:48,3,0
chr10	35846553	.	CAAA	C	4684.83	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=3.339;DP=576;FS=6.397;HRun=17;HaplotypeScore=104.1524;InbreedingCoeff=0.9142;MQ=63.69;MQ0=5;MQRankSum=-2.510;QD=14.92;ReadPosRankSum=4.106;VQSLOD=3.3350;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:38:57.52:0,58,441	1/1:1,4:5:9.02:92,9,0	0/0:44,0:14:13.44:0,13,137	0/0:34,0:14:9.95:0,10,103	0/0:7,0:31:34.12:0,34,505	1/1:2,13:18:37.55:364,38,0	1/1:4,0:11:14.54:87,15,0	1/1:6,15:25:47.53:445,48,0	0/0:17,0:24:41.44:0,41,381	1/1:3,11:16:16.82:299,17,0	1/1:5,11:20:29.21:241,29,0	0/0:13,0:16:35.96:0,36,443	1/1:6,6:14:20.71:189,21,0	1/1:1,8:11:20.78:177,21,0	1/1:11,7:22:23.52:206,24,0	0/0:7,1:25:2.16:0,2,243	0/0:7,0:22:17.06:0,17,244	1/1:5,10:17:25.35:246,25,0	1/1:10,11:22:9.05:343,9,0	1/1:10,18:29:31.42:386,31,0	1/1:5,7:14:5.85:99,6,0	1/1:4,9:15:29.74:281,30,0	0/0:14,0:19:39.36:0,39,551	0/0:8,0:7:12.92:0,13,163	1/1:3,8:12:20.92:202,21,0	1/1:6,12:20:38.64:373,39,0	1/1:9,18:28:38.41:373,38,0	1/1:2,10:14:29.78:281,30,0
chr10	35847744	.	G	GA	3783.25	PASS	AB=0.670;AC=30;AF=0.536;AN=56;BaseQRankSum=-5.005;DP=510;FS=4.015;HRun=12;HaplotypeScore=60.3457;InbreedingCoeff=0.1004;MQ=48.49;MQ0=15;MQRankSum=-1.808;QD=10.12;ReadPosRankSum=-1.633;VQSLOD=2.5646;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:7,19:28:11.14:190,0,11	0/1:6,3:8:10.86:54,0,11	1/1:12,1:2:1.55:4,2,0	0/1:12,0:4:20.49:20,0,28	0/0:26,1:26:38.31:0,38,284	1/1:2,7:8:20.06:180,20,0	0/1:10,13:24:24.13:175,0,24	0/1:17,19:37:26.22:366,0,26	0/0:6,0:7:10.95:0,11,72	1/1:12,6:20:7.38:247,7,0	0/1:9,10:18:0.35:259,0,0	0/0:18,0:20:35.93:0,36,235	0/1:9,9:18:23.79:252,0,24	0/1:9,8:18:14.31:205,0,14	0/1:10,15:22:10.81:220,0,11	0/0:12,1:14:1.72:0,2,158	0/0:37,1:38:53.25:0,53,544	1/1:11,4:15:11.09:140,11,0	1/1:7,8:14:24.04:233,24,0	1/1:4,10:13:11.97:107,12,0	0/1:5,6:10:25.76:99,0,26	1/1:5,5:11:17.81:149,18,0	0/0:11,0:13:28.89:0,29,187	0/0:13,0:13:26.81:0,27,197	0/1:5,11:16:16.47:175,0,16	1/1:10,19:29:32.18:474,32,0	0/1:7,12:19:16.71:175,0,17	1/1:2,5:6:6.01:58,6,0
chr10	35848019	.	TA	T	1490.21	PASS	AB=0.784;AC=32;AF=0.571;AN=56;BaseQRankSum=0.420;DP=536;FS=7.789;HRun=17;HaplotypeScore=83.6230;InbreedingCoeff=0.2644;MQ=66.82;MQ0=1;MQRankSum=0.281;QD=4.07;ReadPosRankSum=2.199;VQSLOD=0.8264;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,6:37:8:0,8,299	1/1:3,2:6:10.69:53,11,0	0/0:32,0:22:25.86:0,26,194	0/1:24,1:16:10.74:11,0,16	0/1:23,3:27:8.51:9,0,214	1/1:16,8:25:6.88:130,7,0	0/1:5,7:15:14.85:59,0,15	0/1:16,10:27:13.92:98,0,14	0/0:16,2:20:21.91:0,22,243	1/1:9,5:14:22.71:125,23,0	1/1:11,3:15:10.35:55,10,0	0/0:22,1:23:16.08:0,16,209	1/1:10,9:20:35.98:193,36,0	1/1:11,3:14:12.07:67,12,0	1/1:7,12:21:28.10:144,28,0	0/1:18,1:19:13.91:14,0,185	0/0:28,0:29:28.95:0,29,334	1/1:10,10:21:42.75:236,43,0	0/1:15,2:17:47.20:51,0,47	1/1:11,6:18:1.16:95,1,0	1/1:2,1:4:6.99:28,7,0	0/1:4,3:8:11.40:28,0,11	0/0:12,0:12:20.73:0,21,146	0/0:15,1:16:24.77:0,25,186	0/1:5,3:9:10.70:38,0,11	1/1:19,5:24:21.23:117,21,0	0/1:12,5:20:1.06:76,0,1	0/1:12,4:16:7.19:52,0,7
chr10	35848084	.	G	GTA	9935.97	PASS	AB=0.756;AC=35;AF=0.625;AN=56;BaseQRankSum=-14.151;DP=575;FS=3.543;HRun=0;HaplotypeScore=100.5630;InbreedingCoeff=0.4881;MQ=91.21;MQ0=2;MQRankSum=0.637;QD=23.66;ReadPosRankSum=-1.501;VQSLOD=5.2220;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:54.14:0,54,643	1/1:3,4:7:15.05:243,15,0	0/1:31,0:24:30.11:30,0,67	0/1:50,0:35:25:30,0,25	0/0:4,0:39:73.86:0,74,363	1/1:5,17:22:51.16:811,51,0	1/1:8,5:13:12.04:185,12,0	1/1:14,22:36:10.49:979,10,0	0/0:3,0:15:22.73:0,23,112	1/1:3,15:18:45.13:688,45,0	1/1:5,17:22:11.01:701,11,0	0/1:13,2:15:57.39:57,0,335	1/1:5,9:14:30.09:466,30,0	0/1:6,9:15:4.40:420,0,4	1/1:3,9:12:27.09:443,27,0	0/0:1,0:16:39.77:0,40,195	0/0:5,0:29:53.97:0,54,265	0/1:8,16:24:99:514,0,101	1/1:11,14:25:13.94:656,14,0	0/1:8,15:23:1.06:502,0,1	1/1:2,4:6:12.04:197,12,0	1/1:1,1:2:3.01:49,3,0	0/0:16,0:16:48.08:0,48,561	0/0:11,0:11:27.08:0,27,335	1/1:2,17:20:7.96:629,8,0	1/1:7,19:26:26.06:896,26,0	1/1:2,22:24:57.19:934,57,0	0/1:4,11:14:1.05:505,0,1
chr10	35850222	.	T	TG	8817.47	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-11.839;DP=489;FS=0.000;HRun=6;HaplotypeScore=50.7143;InbreedingCoeff=0.9633;MQ=89.41;MQ0=0;MQRankSum=-2.328;QD=29.59;ReadPosRankSum=-0.925;VQSLOD=4.8834;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:66.05:0,66,657	1/1:0,3:3:6.02:75,6,0	0/0:16,0:16:39.08:0,39,394	0/0:23,0:23:44.15:0,44,443	0/0:10,0:10:21.04:0,21,214	1/1:3,11:14:33.11:415,33,0	1/1:4,33:37:87.28:1094,87,0	1/1:1,6:7:18.06:226,18,0	0/0:19,0:19:51.10:0,51,515	1/1:4,6:10:18.05:208,18,0	1/1:4,10:14:33.04:389,33,0	0/0:25,0:25:69.15:0,69,703	1/1:1,9:10:27.09:339,27,0	1/1:1,24:25:60.19:755,60,0	1/1:3,20:23:45.14:566,45,0	0/0:13,0:13:33.07:0,33,336	0/0:30,0:30:84.19:0,84,856	1/1:2,32:34:93.30:1168,93,0	1/1:4,14:18:42.07:484,42,0	1/1:1,8:9:21.07:261,21,0	1/1:3,37:40:93.30:1170,93,0	1/1:0,8:8:18.06:226,18,0	0/0:9,0:9:20.90:0,21,187	0/0:20,0:20:60.14:0,60,612	1/1:1,9:10:27.09:340,27,0	1/1:2,14:16:42.09:510,42,0	1/1:0,18:18:42.13:528,42,0	1/1:2,0:2:6.01:63,6,0
chr10	35850569	.	C	CTG	1471.20	PASS	AB=0.714;AC=15;AF=0.268;AN=56;BaseQRankSum=9.331;DP=577;FS=8.693;HRun=0;HaplotypeScore=94.9965;InbreedingCoeff=0.8353;MQ=65.65;MQ0=2;MQRankSum=-8.562;QD=15.17;ReadPosRankSum=-6.805;VQSLOD=0.4096;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:11,2:13:3.70:151,4,0	0/0:9,0:9:27.09:0,27,414	0/0:25,0:20:57.19:0,57,826	0/0:27,0:23:59.22:0,59,847	1/1:10,5:15:5.57:92,6,0	0/0:33,0:33:96.33:0,96,1470	0/0:20,0:20:60.17:0,60,875	0/0:39,0:39:99:0,117,1768	1/1:9,0:9:21.78:233,22,0	0/0:29,0:29:87.30:0,87,1332	0/0:21,0:21:63.21:0,63,962	1/1:12,4:16:25.31:374,25,0	0/0:22,0:22:63.21:0,63,964	0/0:33,0:33:96.31:0,96,1448	0/0:35,0:35:99:0,102,1541	1/1:19,0:19:42.22:518,42,0	1/1:7,0:7:2.82:131,3,0	0/0:14,0:14:39.13:0,39,597	0/0:19,0:19:52.38:0,52,815	0/0:30,0:30:90.31:0,90,1376	0/0:16,0:16:42.14:0,42,643	0/0:15,0:15:42.14:0,42,641	1/1:13,0:13:11.21:103,11,0	0/1:3,2:5:6.24:52,0,6	0/0:24,0:24:69.22:0,69,1036	0/0:27,0:27:78.26:0,78,1175	0/0:30,0:30:90.31:0,90,1376	0/0:12,0:12:33.11:0,33,505
chr10	35851736	.	T	TA	15164.40	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-15.443;DP=645;FS=1.425;HRun=5;HaplotypeScore=54.9035;InbreedingCoeff=0.9991;MQ=78.10;MQ0=0;MQRankSum=-1.276;QD=34.46;ReadPosRankSum=-0.623;VQSLOD=4.8880;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:69.17:0,69,741	1/1:2,12:14:36.12:474,36,0	0/0:14,0:14:32.94:0,33,353	0/0:13,0:13:22.01:0,22,270	0/0:29,0:29:75.18:0,75,806	1/1:1,19:20:54.18:711,54,0	1/1:3,13:16:36.12:473,36,0	1/1:5,29:34:84.23:1061,84,0	0/0:27,0:27:75.19:0,75,806	1/1:0,33:34:99:1337,102,0	1/1:3,18:21:48.16:632,48,0	0/0:19,0:19:54.13:0,54,580	1/1:3,34:37:96.28:1245,96,0	1/1:0,18:18:45.15:592,45,0	1/1:1,27:27:81.26:1066,81,0	0/0:29,0:29:84.20:0,84,895	0/0:15,0:15:39.07:0,39,409	1/1:3,14:17:42.14:553,42,0	1/1:3,30:33:90.26:1153,90,0	1/1:2,29:31:81.26:1066,81,0	1/1:0,21:21:57.19:750,57,0	1/1:3,20:23:60.20:789,60,0	0/0:28,0:28:72.17:0,72,774	0/0:8,0:8:24.06:0,24,258	1/1:1,19:20:54.18:710,54,0	1/1:2,22:24:66.21:869,66,0	1/1:1,36:38:96.30:1250,96,0	1/1:0,11:11:33.11:434,33,0
chr10	35856152	.	T	TTA	839.12	PASS	AB=0.615;AC=11;AF=0.220;AN=50;BaseQRankSum=8.101;DP=336;FS=70.255;HRun=0;HaplotypeScore=56.7627;InbreedingCoeff=0.8090;MQ=51.27;MQ0=16;MQRankSum=-6.784;QD=27.07;ReadPosRankSum=-4.160;VQSLOD=1.0392;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,5:5:12.04:151,12,0	0/0:4,0:4:9.03:0,9,147	./.	0/0:10,0:7:12.03:0,12,182	./.	0/0:14,0:14:39.12:0,39,606	0/0:24,0:20:48.16:0,48,776	0/0:16,0:14:39.12:0,39,613	1/1:0,3:3:9.03:117,9,0	0/0:21,0:19:54.16:0,54,829	0/0:13,0:13:33.11:0,33,538	1/1:0,5:5:15.05:212,15,0	0/0:15,0:13:36.12:0,36,585	0/0:24,0:24:69.24:0,69,1120	0/0:24,0:24:66.23:0,66,1073	1/1:0,2:2:6.02:80,6,0	0/1:3,5:7:73.30:250,0,73	0/0:16,0:16:45.15:0,45,734	0/0:17,0:17:48.12:0,48,754	0/0:9,0:9:27.09:0,27,440	0/0:20,0:17:47.67:0,48,780	0/0:14,0:14:42.14:0,42,682	./.	1/1:1,7:6:15.05:190,15,0	0/0:12,0:12:36.12:0,36,587	0/0:15,0:15:45.11:0,45,703	0/0:20,0:18:51.17:0,51,832	0/0:9,0:7:21.07:0,21,334
chr10	35856209	.	AGAACC	A	2446.48	PASS	AB=0.936;AC=19;AF=0.500;AN=38;BaseQRankSum=-0.554;DP=322;FS=17.860;HRun=0;HaplotypeScore=79.6827;InbreedingCoeff=-0.8455;MQ=39.30;MQ0=20;MQRankSum=-1.664;QD=8.02;ReadPosRankSum=-1.747;VQSLOD=0.1178;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:4,1:5:6.02:0,6,91	1/1:5,0:3:1.94:16,2,0	./.	./.	0/1:15,0:16:99:201,0,607	0/1:16,5:16:77.54:78,0,520	0/1:25,2:23:99:318,0,568	./.	0/1:15,0:14:65.18:65,0,440	0/1:20,0:19:33.50:34,0,315	./.	0/1:17,0:14:99:196,0,487	0/1:14,0:14:99:302,0,197	0/1:17,0:17:99:104,0,813	./.	./.	0/1:16,0:16:34.37:34,0,466	0/1:12,6:18:99:265,0,565	0/1:14,1:14:99:150,0,416	0/1:6,0:4:12.85:13,0,125	0/1:5,3:8:76.35:76,0,260	./.	./.	0/1:12,1:13:22.55:23,0,277	0/1:18,0:16:99:339,0,453	0/1:25,1:23:99:238,0,790	0/1:28,0:23:99:117,0,801
chr10	35856214	.	C	CAAAAAA	5130.16	PASS	AB=1.000;AC=37;AF=0.974;AN=38;BaseQRankSum=-1.379;DP=332;FS=0.000;HRun=18;HaplotypeScore=102.7732;InbreedingCoeff=0.0967;MQ=40.73;MQ0=21;MQRankSum=-1.732;QD=16.23;ReadPosRankSum=1.158;VQSLOD=0.6250;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	1/1:1,0:6:6.02:157,6,0	0/1:13,0:5:0.29:8,0,0	./.	./.	1/1:16,0:16:38.78:386,39,0	1/1:19,0:14:16.99:141,17,0	1/1:27,0:23:41.97:537,42,0	./.	1/1:16,0:15:24.08:378,24,0	1/1:6,17:21:14.87:197,15,0	./.	1/1:16,0:13:26.17:299,26,0	1/1:15,0:15:28.99:373,29,0	1/1:16,0:16:26.80:227,27,0	./.	./.	1/1:17,0:17:39.36:353,39,0	1/1:15,0:15:26.95:312,27,0	1/1:14,0:14:25.75:244,26,0	1/1:8,0:6:10.73:67,11,0	1/1:8,0:8:9.03:120,9,0	./.	./.	1/1:4,8:12:6.02:121,6,0	1/1:19,0:17:38.39:397,38,0	1/1:26,0:23:33.01:393,33,0	1/1:29,0:23:41.77:422,42,0
chr10	35857163	.	AAC	A	4336.42	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=10.832;DP=662;FS=4.206;HRun=0;HaplotypeScore=93.7290;InbreedingCoeff=0.9995;MQ=76.93;MQ0=1;MQRankSum=-3.800;QD=40.53;ReadPosRankSum=1.945;VQSLOD=6.7734;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,126,2332	0/0:10,0:10:30.10:0,30,563	0/0:27,0:27:51.97:0,52,1349	0/0:18,0:16:45.15:0,45,844	1/1:5,21:26:78.25:1148,78,0	0/0:33,0:33:96.31:0,96,1808	0/0:21,0:21:60.21:0,60,1158	0/0:37,0:37:99:0,108,2055	1/1:1,20:21:60.20:918,60,0	0/0:28,0:28:84.28:0,84,1579	0/0:18,0:18:51.17:0,51,961	0/0:22,0:22:66.21:0,66,1226	0/0:17,0:17:48.16:0,48,918	0/0:15,0:15:45.12:0,45,793	0/0:21,0:21:63.19:0,63,1142	1/1:2,31:33:87.21:1261,87,0	1/1:0,27:27:66.22:1010,66,0	0/0:13,0:13:36.12:0,36,694	0/0:20,0:20:57.18:0,57,1018	0/0:26,0:26:78.24:0,78,1424	0/0:30,0:30:90.28:0,90,1686	0/0:18,0:18:51.11:0,51,945	0/0:22,0:22:60.21:0,60,1126	0/0:30,0:30:87.28:0,87,1620	0/0:22,0:22:66.21:0,66,1228	0/0:32,0:32:96.30:0,96,1739	0/0:22,0:22:66.23:0,66,1254	0/0:9,0:9:27.09:0,27,508
chr10	35857208	.	G	GAC	2427.90	PASS	AB=0.638;AC=6;AF=0.107;AN=56;BaseQRankSum=1.609;DP=705;FS=4.072;HRun=0;HaplotypeScore=112.2758;InbreedingCoeff=0.6287;MQ=66.93;MQ0=11;MQRankSum=-4.537;QD=25.03;ReadPosRankSum=-0.163;VQSLOD=4.5304;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:84.25:0,84,1023	0/0:11,0:11:30.09:0,30,371	0/0:60,0:42:56.70:0,57,607	0/0:63,0:39:34.40:0,34,509	0/1:9,21:30:17.14:764,0,17	0/0:32,0:32:63.20:0,63,779	0/0:15,0:15:33.08:0,33,393	0/0:37,0:37:68.05:0,68,820	1/1:5,16:22:42.14:686,42,0	0/0:27,0:26:60.18:0,60,733	0/0:13,0:13:30.08:0,30,359	0/0:24,0:25:66.04:0,66,793	0/0:15,0:15:42.13:0,42,519	0/0:18,0:18:42.13:0,42,517	0/0:20,0:20:54.15:0,54,656	1/1:10,13:23:39.13:638,39,0	0/1:12,10:22:35.23:477,0,35	0/0:16,0:16:36.11:0,36,446	0/0:21,0:20:36.11:0,36,444	0/0:14,0:14:36.11:0,36,446	0/0:37,0:37:90.09:0,90,1067	0/0:14,0:15:36.11:0,36,445	0/0:20,0:20:48.15:0,48,593	0/0:25,0:25:51.16:0,51,631	0/0:24,0:24:60.19:0,60,743	0/0:29,0:29:64.94:0,65,806	0/0:20,0:20:48.13:0,48,580	0/0:10,0:10:18.06:0,18,223
chr10	35857589	.	TGGGGTG	T	4394.30	PASS	AC=16;AF=0.296;AN=54;BaseQRankSum=7.935;DP=256;FS=21.249;HRun=0;HaplotypeScore=60.8155;InbreedingCoeff=0.7620;MQ=80.47;MQ0=3;MQRankSum=-9.311;QD=31.39;ReadPosRankSum=2.150;VQSLOD=2.7341;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,17:22:30.10:627,30,0	0/0:1,0:1:3.01:0,3,101	0/0:13,0:13:18.04:0,18,328	0/0:8,0:8:6:0,6,111	1/1:1,25:26:48.16:1010,48,0	0/0:4,0:4:6.02:0,6,201	0/0:10,0:10:15.05:0,15,503	0/0:9,0:9:6.02:0,6,201	1/1:3,14:17:27.09:576,27,0	0/0:9,0:9:15.05:0,15,399	0/0:6,0:6:15.05:0,15,481	1/1:8,12:18:24.08:514,24,0	0/0:2,0:2:6.02:0,6,175	0/0:3,0:3:6.02:0,6,175	0/0:7,0:7:18.05:0,18,464	1/1:1,14:15:39.13:835,39,0	1/1:10,10:19:14.06:320,14,0	0/0:2,0:2:3.01:0,3,101	0/0:3,0:3:6.02:0,6,201	0/0:2,0:2:6.02:0,6,193	0/0:9,0:9:21.07:0,21,703	0/0:8,0:8:24.08:0,24,761	1/1:5,9:14:18.06:385,18,0	1/1:2,4:6:6.02:128,6,0	0/0:6,0:6:6.02:0,6,201	0/0:7,0:7:9.02:0,9,226	0/0:5,0:5:9.01:0,9,194	./.
chr10	35858123	.	A	AT	5249.68	PASS	AB=0.933;AC=17;AF=0.304;AN=56;BaseQRankSum=6.082;DP=639;FS=1.494;HRun=2;HaplotypeScore=75.3562;InbreedingCoeff=0.9326;MQ=67.30;MQ0=2;MQRankSum=-0.396;QD=26.12;ReadPosRankSum=3.686;VQSLOD=4.6822;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,17:19:32.25:610,32,0	0/0:6,0:6:18.05:0,18,211	0/1:12,1:10:1.24:1,0,39	0/0:7,0:7:5.91:0,6,52	1/1:35,3:37:99:1030,105,0	0/0:26,0:25:63.65:0,64,849	0/0:19,0:19:48.02:0,48,564	0/0:41,0:41:99:0,120,1376	1/1:20,0:20:45.03:441,45,0	0/0:23,0:23:63.17:0,63,742	0/0:22,0:22:54.12:0,54,621	1/1:1,14:16:39.02:511,39,0	0/0:11,0:11:33.06:0,33,367	0/0:36,0:36:99:0,108,1206	0/0:21,0:21:48.10:0,48,542	1/1:29,1:29:74.83:757,75,0	1/1:24,0:24:63.13:638,63,0	0/0:19,0:19:53.17:0,53,607	0/0:28,0:28:76.07:0,76,833	0/0:31,0:31:90.21:0,90,1037	0/0:16,0:16:45.04:0,45,474	0/0:29,0:29:76.77:0,77,945	1/1:1,21:22:54.13:748,54,0	1/1:0,18:18:36.12:514,36,0	0/0:24,0:24:69.16:0,69,791	0/0:28,0:28:84.18:0,84,935	0/0:27,0:27:75.13:0,75,827	0/0:24,0:24:69.17:0,69,810
chr10	35858338	.	A	ATTGGTAC	15406.14	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-6.534;DP=643;FS=8.719;HRun=0;HaplotypeScore=138.2229;InbreedingCoeff=0.9941;MQ=87.15;MQ0=0;MQRankSum=-17.126;QD=88.54;ReadPosRankSum=-0.340;VQSLOD=5.2431;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,16:26:51.18:1925,51,0	0/0:6,0:6:12.02:0,12,261	0/0:21,0:21:57.20:0,57,1433	0/0:30,0:30:75.22:0,75,1825	1/1:12,15:30:57.20:2191,57,0	0/0:33,0:33:87.30:0,87,2294	0/0:18,0:18:51.17:0,51,1278	0/0:25,0:25:72.25:0,72,1832	1/1:5,13:21:54.19:2142,54,0	0/0:35,0:35:99:0,102,2549	0/0:19,0:19:48.16:0,48,1266	1/1:4,13:22:48.16:1910,48,0	0/0:22,0:22:66.20:0,66,1685	0/0:24,0:24:72.20:0,72,1769	0/0:35,0:35:99:0,99,2551	1/1:4,23:29:75.26:3007,75,0	1/1:5,11:18:48.16:1890,48,0	0/0:13,0:13:39.10:0,39,971	0/0:23,0:23:60.21:0,60,1517	0/0:27,0:27:78.27:0,78,1996	0/0:20,0:20:45.15:0,45,1159	0/0:21,0:21:57.20:0,57,1470	1/1:0,15:16:39.13:1558,39,0	1/1:1,8:11:21.07:783,21,0	0/0:28,0:28:84.29:0,84,2197	0/0:22,0:22:63.22:0,63,1630	0/0:24,0:23:66.23:0,66,1733	0/0:23,0:23:60.21:0,60,1583
chr10	35859500	.	ATTTT	A	1509.35	PASS	AB=0.796;AC=8;AF=0.143;AN=56;BaseQRankSum=9.811;DP=516;FS=14.699;HRun=4;HaplotypeScore=103.4978;InbreedingCoeff=-0.1642;MQ=71.47;MQ0=3;MQRankSum=-7.613;QD=12.37;ReadPosRankSum=1.190;VQSLOD=-0.4792;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:9,0:14:99:234,0,674	0/0:10,0:10:27.09:0,27,742	0/0:35,0:18:35:0,35,472	0/0:34,0:24:35.26:0,35,761	0/1:20,14:34:99:512,0,1445	0/0:15,0:15:45.15:0,45,1213	0/0:15,0:15:45.15:0,45,1237	0/0:32,0:32:96.32:0,96,2523	0/1:5,3:7:41.77:42,0,395	0/0:23,0:23:69.24:0,69,1910	0/0:18,0:18:54.19:0,54,1425	0/1:9,0:9:33.01:33,0,507	0/0:13,0:13:38.72:0,39,1016	0/0:15,0:15:45.15:0,45,1205	0/0:18,0:18:54.19:0,54,1459	0/1:12,10:22:99:432,0,924	0/1:11,5:18:99:246,0,667	0/0:23,0:23:69.24:0,69,1877	0/0:18,0:18:54.19:0,54,1441	0/0:30,0:30:87.30:0,87,2319	0/0:8,0:8:24.08:0,24,663	0/0:5,0:4:12.04:0,12,309	0/1:9,1:10:99:138,0,449	0/1:6,0:7:5.39:5,0,369	0/0:21,0:21:63.22:0,63,1708	0/0:23,0:23:69.23:0,69,1850	0/0:32,0:31:93.32:0,93,2526	0/0:4,0:4:12.02:0,12,272
chr10	35860080	.	G	GA	1578.97	PASS	AB=0.848;AC=19;AF=0.339;AN=56;BaseQRankSum=1.967;DP=453;FS=0.453;HRun=13;HaplotypeScore=97.3556;InbreedingCoeff=0.5468;MQ=55.17;MQ0=9;MQRankSum=-7.887;QD=7.55;ReadPosRankSum=-2.740;VQSLOD=2.2295;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:21,13:34:15.38:344,15,0	0/0:9,0:9:23.78:0,24,163	0/0:10,0:3:7.96:0,8,45	0/0:9,0:5:10.74:0,11,67	1/1:6,1:15:25.09:149,25,0	0/0:17,0:17:41.60:0,42,287	0/1:9,3:13:58.74:74,0,59	0/0:24,1:22:16.60:0,17,260	1/1:8,0:16:34.79:192,35,0	0/1:12,1:13:7.06:7,0,102	0/0:8,1:11:0.60:0,1,128	1/1:11,8:20:13.29:251,13,0	0/1:10,2:13:23.88:24,0,135	0/0:17,0:17:23.75:0,24,164	0/0:14,0:13:29.68:0,30,202	1/1:11,3:19:37.56:226,38,0	1/1:14,0:22:32.93:209,33,0	0/0:24,0:25:52.52:0,53,353	0/0:21,2:22:0.77:0,1,266	0/0:13,0:13:11.54:0,12,162	0/1:14,1:15:3.23:3,0,100	0/0:9,1:10:14.69:0,15,101	1/1:5,6:11:20.85:177,21,0	0/1:9,7:16:5.39:114,0,5	0/0:16,0:18:29.15:0,29,190	0/0:15,0:17:28.07:0,28,187	0/0:20,0:20:34.68:0,35,232	0/0:4,0:4:5.93:0,6,41
chr10	35860103	.	A	AG	14108.37	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-4.762;DP=469;FS=3.406;HRun=3;HaplotypeScore=60.5554;InbreedingCoeff=0.9219;MQ=56.25;MQ0=4;MQRankSum=-0.924;QD=32.43;ReadPosRankSum=3.662;VQSLOD=5.1253;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,31:32:66.22:923,66,0	1/1:0,7:7:21.07:294,21,0	0/0:18,0:11:21.01:0,21,231	0/0:14,0:11:12.82:0,13,277	1/1:6,13:19:33.10:445,33,0	1/1:0,19:18:54.18:756,54,0	1/1:2,12:14:21.07:294,21,0	1/1:2,30:33:90.29:1241,90,0	1/1:2,10:12:33.11:461,33,0	1/1:0,16:16:45.15:628,45,0	1/1:2,16:18:39.13:546,39,0	1/1:2,12:14:36.12:503,36,0	1/1:0,11:11:30.10:419,30,0	1/1:2,15:17:36.12:504,36,0	1/1:0,13:13:36.12:504,36,0	1/1:2,13:15:33.08:461,33,0	1/1:4,16:20:42.10:565,42,0	1/1:1,20:21:51.17:714,51,0	1/1:5,21:26:60.15:824,60,0	1/1:0,14:14:36.12:504,36,0	1/1:0,20:20:42.14:588,42,0	1/1:1,9:10:21.07:294,21,0	1/1:2,11:13:17.68:230,18,0	1/1:2,14:16:30.10:419,30,0	1/1:2,19:21:54.17:738,54,0	1/1:0,12:12:33.11:457,33,0	1/1:2,17:19:51.17:711,51,0	1/1:1,2:3:6.02:84,6,0
chr10	35860279	.	TA	T	1345.31	PASS	AB=0.925;AC=20;AF=0.357;AN=56;BaseQRankSum=7.939;DP=488;FS=2.921;HRun=14;HaplotypeScore=67.7186;InbreedingCoeff=0.6899;MQ=66.71;MQ0=1;MQRankSum=2.039;QD=5.87;ReadPosRankSum=4.805;VQSLOD=2.5942;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,0:24:36.44:105,36,0	0/1:4,1:5:8.57:9,0,67	0/1:23,2:22:6.80:7,0,147	0/0:12,0:8:8.72:0,9,64	1/1:6,23:31:42.70:406,43,0	0/1:13,1:16:2.45:2,0,237	0/0:10,0:10:8.03:0,8,198	0/0:20,0:20:41.94:0,42,369	1/1:4,16:20:44.61:308,45,0	0/0:25,0:25:60.06:0,60,553	0/0:22,0:25:40.40:0,40,444	1/1:3,0:21:36.44:107,36,0	0/0:11,0:12:29.87:0,30,265	0/0:13,0:13:20.95:0,21,220	0/0:14,0:13:36.04:0,36,334	1/1:7,15:22:29.21:307,29,0	1/1:5,14:20:11.08:188,11,0	0/0:20,0:20:21.65:0,22,381	0/0:9,0:11:25.25:0,25,196	0/0:13,0:13:30.03:0,30,279	0/0:12,0:12:29.98:0,30,269	0/0:10,0:10:24:0,24,215	1/1:3,0:21:28.52:84,29,0	1/1:1,0:5:3.86:12,4,0	0/0:18,0:20:44.66:0,45,376	0/0:25,0:26:50.43:0,50,402	0/0:16,0:16:35.71:0,36,373	0/1:19,0:18:11.05:11,0,139
chr10	35861316	.	T	TA	2139.86	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=-8.863;DP=615;FS=2.777;HRun=9;HaplotypeScore=57.8398;InbreedingCoeff=0.8691;MQ=79.38;MQ0=0;MQRankSum=-1.205;QD=21.61;ReadPosRankSum=-0.469;VQSLOD=4.1239;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:26:71.01:0,71,605	0/0:10,0:10:20.99:0,21,182	0/0:20,0:21:35.87:0,36,292	0/1:13,0:13:8.86:9,0,92	1/1:7,23:31:72.02:771,72,0	0/0:20,0:20:36.37:0,36,464	0/0:26,0:26:59.96:0,60,521	0/0:29,0:29:77.88:0,78,667	1/1:2,19:21:51.14:564,51,0	0/0:28,0:28:71.88:0,72,615	0/0:18,0:17:44.99:0,45,391	0/0:20,0:21:59.02:0,59,501	0/0:36,0:36:92.94:0,93,803	0/0:27,0:27:65.94:0,66,567	0/0:25,0:25:62.97:0,63,547	1/1:2,14:16:42.11:465,42,0	1/1:2,16:18:45.12:495,45,0	0/0:20,0:20:50.96:0,51,443	0/0:14,1:16:11.75:0,12,309	0/0:28,0:28:74.98:0,75,651	0/0:19,0:19:53.99:0,54,469	0/0:17,0:17:41.98:0,42,364	0/0:20,0:21:53.26:0,53,468	0/0:18,0:18:39.45:0,39,339	0/0:13,0:13:32.98:0,33,286	0/0:32,0:32:83.98:0,84,729	0/0:38,0:38:99:0,102,873	0/0:7,0:7:14.98:0,15,130
chr10	35862435	.	CA	C	3746.61	PASS	AB=0.835;AC=46;AF=0.885;AN=52;BaseQRankSum=-6.340;DP=337;FS=39.000;HRun=9;HaplotypeScore=64.5845;InbreedingCoeff=0.0386;MQ=35.14;MQ0=27;MQRankSum=0.221;QD=11.42;ReadPosRankSum=4.675;VQSLOD=0.2998;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:19,3:15:12.16:12,0,33	1/1:2,3:5:12:108,12,0	0/0:2,0:1:0:0,0,0	./.	1/1:6,9:14:18:165,18,0	1/1:3,9:11:21:192,21,0	1/1:6,5:11:16.81:142,17,0	1/1:7,9:16:29.96:269,30,0	1/1:2,8:10:14.99:137,15,0	1/1:7,8:13:24.92:241,25,0	1/1:3,9:12:15:137,15,0	0/1:6,2:6:16.90:17,0,19	1/1:1,8:9:9:82,9,0	1/1:8,10:16:27.01:247,27,0	1/1:3,14:17:32.94:293,33,0	1/1:8,7:14:14.89:137,15,0	1/1:10,8:13:20.98:192,21,0	1/1:4,2:6:8.60:81,9,0	1/1:4,9:11:27.01:247,27,0	1/1:12,9:20:26.94:247,27,0	./.	1/1:1,9:10:24.01:219,24,0	0/1:10,3:12:17.42:18,0,17	0/1:9,2:8:16.15:19,0,16	1/1:4,4:8:12:109,12,0	1/1:4,10:13:30:274,30,0	1/1:15,8:23:14.33:136,14,0	1/1:5,0:2:2.99:25,3,0
chr10	35863094	.	G	GTTTT	4420.08	PASS	AB=0.600;AC=15;AF=0.300;AN=50;BaseQRankSum=9.673;DP=242;FS=7.141;HRun=1;HaplotypeScore=45.0741;InbreedingCoeff=0.8171;MQ=37.83;MQ0=39;MQRankSum=-6.491;QD=51.40;ReadPosRankSum=2.766;VQSLOD=3.4284;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,8:9:21.07:567,21,0	0/0:4,0:3:9.03:0,9,177	./.	./.	0/1:5,10:14:25.29:705,0,25	0/0:10,0:8:18.06:0,18,350	0/0:4,0:3:9.03:0,9,158	0/0:14,0:13:36.08:0,36,667	1/1:2,3:4:9.03:243,9,0	0/0:14,0:10:27.56:0,28,528	0/0:12,0:11:27.09:0,27,530	1/1:2,4:5:15.05:385,15,0	0/0:7,0:6:18.06:0,18,353	0/0:4,0:4:12.04:0,12,235	0/0:7,0:7:21.07:0,21,413	1/1:0,6:6:15.05:398,15,0	1/1:9,18:24:66.19:1647,66,0	0/0:10,0:7:15.05:0,15,295	0/0:12,0:10:27.09:0,27,529	0/0:10,0:8:21.54:0,22,413	0/0:13,0:12:27.09:0,27,529	./.	1/1:2,1:3:9.03:230,9,0	1/1:4,4:4:9.03:245,9,0	0/0:7,0:7:14.70:0,15,294	0/0:7,0:6:18.06:0,18,348	0/0:9,0:7:21.07:0,21,411	0/0:8,0:3:9.03:0,9,177
chr10	35863112	.	AAG	A	172.30	PASS	AB=0.956;AC=12;AF=0.222;AN=54;BaseQRankSum=1.309;DP=331;FS=2.809;HRun=0;HaplotypeScore=54.8749;InbreedingCoeff=-0.1557;MQ=31.74;MQ0=40;MQRankSum=-1.493;QD=1.14;ReadPosRankSum=-3.162;VQSLOD=0.8273;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:21:8.05:0,8,190	0/0:8,0:6:15.13:0,15,107	./.	0/1:10,0:4:2:8,0,2	0/1:15,1:15:15.01:15,0,76	0/0:11,0:8:14.96:0,15,104	0/0:5,0:4:2.14:0,2,18	0/1:31,0:24:2.31:2,0,125	0/1:3,1:3:24.87:31,0,25	0/0:14,0:8:2.08:0,2,52	0/0:14,0:13:22.98:0,23,145	0/0:4,0:2:2.88:0,3,19	0/0:8,0:7:1.25:0,1,121	0/0:5,0:5:6.73:0,7,71	0/0:10,0:10:7.38:0,7,127	0/1:9,1:10:30.50:30,0,41	0/1:28,3:25:99:130,0,148	0/1:11,0:7:8.42:8,0,37	0/0:12,0:11:8.60:0,9,115	0/0:14,0:9:10.44:0,10,81	0/0:11,0:9:7.03:0,7,77	1/1:2,0:2:1.25:3,1,0	0/1:11,0:10:42.85:57,0,43	0/0:9,0:5:7.90:0,8,36	0/1:12,0:9:10.93:11,0,62	0/0:13,0:10:9.86:0,10,85	0/0:12,0:9:22.64:0,23,152	0/1:13,0:5:0.59:1,0,53
chr10	35863131	.	AAG	A	48.87	PASS	AB=0.958;AC=8;AF=0.143;AN=56;BaseQRankSum=3.157;DP=362;FS=22.312;HRun=0;HaplotypeScore=52.6276;InbreedingCoeff=-0.0561;MQ=48.70;MQ0=23;MQRankSum=-3.924;QD=0.69;ReadPosRankSum=2.375;VQSLOD=0.0944;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:25:28.58:0,29,381	1/1:4,0:3:2.57:33,3,0	0/0:15,0:5:5.01:0,5,63	0/0:18,0:10:15.95:0,16,151	0/1:16,1:16:54.60:55,0,115	0/0:10,0:7:11.24:0,11,135	0/0:7,0:6:9.45:0,9,75	0/0:33,1:27:12.78:0,13,327	0/0:5,0:5:3.79:0,4,45	0/0:18,0:14:10.39:0,10,224	0/1:8,0:8:12.84:13,0,99	0/0:12,0:10:20.83:0,21,155	0/0:6,0:5:1.64:0,2,31	0/1:6,1:7:15.57:16,0,54	0/0:11,0:11:13.97:0,14,217	0/1:11,0:11:31.19:31,0,72	0/0:25,0:21:5.94:0,6,238	0/0:12,0:9:7.67:0,8,58	0/0:15,0:14:26.06:0,26,270	0/0:17,0:12:27.39:0,27,191	0/0:10,0:8:7.71:0,8,61	0/0:6,0:6:10.48:0,10,86	0/1:11,0:11:11.98:12,0,70	0/0:5,0:4:2.88:0,3,17	0/0:9,0:6:10.89:0,11,84	0/0:14,0:10:20.78:0,21,216	0/0:16,0:14:7.82:0,8,275	0/1:12,1:9:15.90:16,0,77
chr10	35863248	.	GCGCGCTTTCT	G	604.93	PASS	AB=1.000;AC=6;AF=0.107;AN=56;BaseQRankSum=5.004;DP=448;FS=1.736;HRun=0;HaplotypeScore=140.3130;InbreedingCoeff=0.3255;MQ=64.46;MQ0=7;MQRankSum=2.158;QD=5.65;ReadPosRankSum=0.571;VQSLOD=2.7784;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,22:25:9.03:211,9,0	0/0:3,0:3:9.03:0,9,200	0/0:18,0:10:20.96:0,21,358	0/0:22,0:10:7.85:0,8,70	0/1:16,0:16:16.50:24,0,17	0/0:15,0:15:36.12:0,36,960	0/0:15,0:15:39.10:0,39,926	0/0:26,0:25:54.18:0,54,1332	0/1:13,0:13:0:0,0,0	0/0:14,0:14:37.92:0,38,892	0/0:7,0:7:21.02:0,21,421	0/0:11,0:11:17.93:0,18,478	0/0:17,0:17:45.58:0,46,1119	0/0:11,0:11:28.81:0,29,579	0/0:12,0:12:28.83:0,29,734	0/1:22,0:22:99:179,0,358	0/1:31,0:31:99:306,0,495	0/0:9,0:8:24.08:0,24,812	0/0:13,0:13:36.09:0,36,899	0/0:8,0:8:21.07:0,21,469	0/0:33,0:32:67.75:0,68,1542	0/0:13,0:13:30.10:0,30,730	0/0:12,0:12:25.72:0,26,512	0/0:24,0:22:31.75:0,32,728	0/0:23,0:22:51.18:0,51,1187	0/0:15,0:15:45.10:0,45,1122	0/0:8,0:8:20.93:0,21,331	0/0:12,0:11:27.09:0,27,592
chr10	35863251	.	CGCTT	C	1843.84	PASS	AB=1.000;AC=10;AF=0.179;AN=56;BaseQRankSum=6.600;DP=427;FS=8.353;HRun=0;HaplotypeScore=94.1729;InbreedingCoeff=0.6518;MQ=59.38;MQ0=7;MQRankSum=1.043;QD=15.37;ReadPosRankSum=1.501;VQSLOD=2.6875;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:24:9.03:105,9,0	0/0:3,0:3:9.03:0,9,141	0/0:15,0:7:17.97:0,18,233	0/1:18,0:6:5.04:8,0,5	1/1:2,13:15:5.99:59,6,0	0/0:14,0:14:36.12:0,36,617	0/0:15,0:15:38.61:0,39,546	0/0:23,0:22:53.94:0,54,797	0/0:4,11:15:0.40:0,0,1	0/0:13,0:13:37.29:0,37,530	0/0:6,0:6:18.05:0,18,264	0/0:12,0:12:0.88:0,1,96	0/0:16,0:16:44.67:0,45,653	0/0:10,0:10:15.40:0,15,291	0/0:11,0:11:28.67:0,29,468	1/1:23,0:23:52.99:811,53,0	1/1:29,1:30:72.75:987,73,0	0/0:9,0:8:24.01:0,24,402	0/0:12,0:12:33.09:0,33,505	0/0:8,0:8:21.07:0,21,320	0/0:29,0:28:60.73:0,61,896	0/0:13,0:13:30.07:0,30,472	0/1:10,0:10:27.84:28,0,88	0/0:24,0:22:5.42:0,5,204	0/0:23,0:22:53.66:0,54,816	0/0:14,0:14:38.59:0,39,581	0/0:9,0:9:17.77:0,18,205	0/0:13,0:12:27.06:0,27,401
chr10	35863323	.	CACAT	C	2766.78	PASS	AB=1.000;AC=32;AF=0.615;AN=52;BaseQRankSum=1.040;DP=560;FS=2.628;HRun=0;HaplotypeScore=140.9826;InbreedingCoeff=0.3365;MQ=50.36;MQ0=30;MQRankSum=2.624;QD=7.32;ReadPosRankSum=-4.416;VQSLOD=1.3336;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:32:18.17:0,18,661	1/1:12,0:11:26.78:193,27,0	0/0:15,0:6:8.16:0,8,96	0/1:21,0:9:20.12:20,0,98	0/0:25,0:22:31.85:0,32,387	0/1:24,0:23:11.65:87,0,12	1/1:20,0:17:7.30:209,7,0	0/1:24,0:23:28.19:236,0,28	0/0:23,0:23:45.04:0,45,685	0/1:17,0:13:8.34:63,0,8	./.	0/1:41,0:39:99:264,0,159	1/1:22,0:21:29.95:299,30,0	1/1:28,0:28:38.01:323,38,0	1/1:22,0:22:6.08:198,6,0	0/0:28,0:28:57.13:0,57,934	0/0:32,0:30:32.16:0,32,938	1/1:10,0:10:5.82:209,6,0	0/1:21,0:19:42.89:186,0,43	./.	1/1:26,0:25:41.71:304,42,0	0/0:9,0:9:0:0,0,0	1/1:13,0:11:2.68:11,3,0	1/1:31,0:28:3.45:24,3,0	1/1:11,0:10:3.55:39,4,0	1/1:15,0:13:10.16:164,10,0	1/1:3,8:11:1.07:6,1,0	1/1:9,0:6:14.89:105,15,0
chr10	35863325	.	CAT	C	3711.51	PASS	AB=0.809;AC=34;AF=0.654;AN=52;BaseQRankSum=0.972;DP=565;FS=2.589;HRun=0;HaplotypeScore=123.5006;InbreedingCoeff=0.4816;MQ=50.69;MQ0=30;MQRankSum=1.959;QD=9.74;ReadPosRankSum=-2.456;VQSLOD=3.2018;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:31:18.17:0,18,472	1/1:12,0:11:26.94:279,27,0	0/0:17,0:8:14.13:0,14,141	0/1:23,0:9:13.09:13,0,104	0/0:26,0:23:37.99:0,38,365	1/1:24,0:23:12.89:126,13,0	1/1:20,0:17:26.48:233,26,0	0/1:8,16:23:21.37:252,0,21	0/0:24,0:24:48.01:0,48,524	1/1:6,11:13:0.59:121,1,0	./.	1/1:37,4:39:1.88:293,2,0	1/1:22,0:21:49.84:397,50,0	1/1:28,0:28:38.60:399,39,0	1/1:23,0:23:41.83:396,42,0	0/0:27,0:27:57.11:0,57,678	0/0:31,0:29:16.86:0,17,627	1/1:10,0:10:8.81:187,9,0	0/1:9,12:19:40.76:226,0,41	./.	1/1:27,0:26:41.75:327,42,0	0/0:1,8:9:0:0,0,0	1/1:12,0:10:2.68:11,3,0	1/1:29,0:26:5.98:47,6,0	0/1:12,0:11:13.05:52,0,13	1/1:15,0:13:20.84:217,21,0	1/1:11,0:11:1.06:6,1,0	1/1:10,0:7:17.88:129,18,0
chr10	35863327	.	T	TAC	5719.75	PASS	AB=1.000;AC=33;AF=0.635;AN=52;BaseQRankSum=-3.895;DP=565;FS=0.975;HRun=0;HaplotypeScore=119.7085;InbreedingCoeff=0.7155;MQ=51.12;MQ0=29;MQRankSum=0.831;QD=17.07;ReadPosRankSum=-1.318;VQSLOD=4.8072;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:31:44.38:0,44,419	1/1:12,0:11:26.31:262,26,0	0/0:18,0:8:8.86:0,9,187	0/0:23,0:9:22.57:0,23,230	0/0:26,0:23:42.09:0,42,471	1/1:26,0:25:20.54:254,21,0	0/1:19,0:16:8.48:321,0,8	1/1:23,0:22:27.96:374,28,0	0/0:24,0:24:48.15:0,48,580	1/1:18,0:14:13.94:156,14,0	./.	1/1:30,10:39:69.17:986,69,0	1/1:23,0:22:47.87:629,48,0	1/1:26,0:26:24.60:395,25,0	1/1:23,0:23:44.92:500,45,0	0/0:26,0:27:60.17:0,60,713	0/0:29,0:28:39.83:0,40,573	1/1:10,0:10:23.93:263,24,0	1/1:21,0:19:26.64:330,27,0	./.	1/1:26,0:25:42.11:584,42,0	0/1:9,0:9:0:0,0,0	1/1:5,7:10:2.90:28,3,0	0/0:15,16:28:2.83:0,3,20	0/1:12,0:11:24.16:126,0,24	1/1:14,0:12:12.79:253,13,0	1/1:11,0:11:3.21:13,3,0	1/1:10,0:7:18.04:246,18,0
chr10	35864820	.	TC	T	874.47	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=8.611;DP=690;FS=2.490;HRun=1;HaplotypeScore=66.1325;InbreedingCoeff=0.9700;MQ=81.03;MQ0=0;MQRankSum=-2.747;QD=28.21;ReadPosRankSum=0.241;VQSLOD=3.4153;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,30:30:82.13:969,82,0	0/0:13,0:13:39.13:0,39,621	0/0:28,0:28:84.24:0,84,1206	0/0:24,0:24:68.93:0,69,986	0/0:33,0:33:87.29:0,87,1352	0/0:24,0:24:72.24:0,72,1137	0/0:20,0:20:60.18:0,60,933	0/0:29,0:29:87.30:0,87,1380	0/0:26,0:26:78.27:0,78,1245	0/0:29,0:29:84.28:0,84,1306	0/0:15,0:15:45.15:0,45,720	0/0:32,0:32:96.30:0,96,1466	0/0:23,0:23:66.20:0,66,997	0/0:26,0:26:78.27:0,78,1233	0/0:40,0:40:99:0,120,1867	0/0:31,0:31:93.32:0,93,1474	0/0:17,0:17:51.17:0,51,791	0/0:12,1:13:34.03:0,34,572	0/0:18,0:18:54.17:0,54,842	0/0:25,0:25:69.24:0,69,1101	0/0:36,0:36:99:0,102,1588	0/0:21,0:21:63.20:0,63,961	0/0:26,0:26:78.25:0,78,1218	0/0:18,0:18:54.18:0,54,860	0/0:15,0:15:45.15:0,45,697	0/0:36,0:36:99:0,108,1693	0/0:37,0:36:99:0,111,1731	0/0:4,0:4:12.04:0,12,192
chr10	35865803	.	CAAACA	C	7516.60	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=15.031;DP=637;FS=14.672;HRun=0;HaplotypeScore=120.3105;InbreedingCoeff=0.9946;MQ=65.82;MQ0=0;MQRankSum=-3.863;QD=43.20;ReadPosRankSum=4.762;VQSLOD=4.2674;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,32:34:72.25:1427,72,0	0/0:11,0:11:30.10:0,30,859	0/0:23,0:20:41.39:0,41,1220	0/0:26,0:24:43.65:0,44,1643	1/1:3,30:33:69.23:1292,69,0	0/0:36,0:36:96.33:0,96,2747	0/0:17,0:17:51.17:0,51,1406	0/0:38,0:38:99:0,99,2497	1/1:1,16:17:42.14:852,42,0	0/0:28,0:28:75.26:0,75,2175	0/0:26,0:26:69.24:0,69,1820	1/1:1,18:19:39.13:792,39,0	0/0:25,0:25:69.20:0,69,1824	0/0:25,0:25:72.25:0,72,2138	0/0:15,0:15:42.14:0,42,1252	1/1:1,24:25:63.22:1268,63,0	1/1:1,20:21:45.15:913,45,0	0/0:18,0:18:47.96:0,48,1403	0/0:19,0:19:48.16:0,48,1397	0/0:31,0:31:87.30:0,87,2509	0/0:21,0:21:57.13:0,57,1578	0/0:10,0:10:30.10:0,30,853	1/1:1,16:17:35.87:731,36,0	1/1:3,5:8:12.04:241,12,0	0/0:23,0:23:66.23:0,66,1967	0/0:22,0:22:63.22:0,63,1785	0/0:33,0:33:90.29:0,90,2506	0/0:16,0:16:42.14:0,42,1090
chr10	35867176	.	CT	C	286.46	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=6.122;DP=482;FS=5.855;HRun=2;HaplotypeScore=80.8173;InbreedingCoeff=0.9461;MQ=77.79;MQ0=0;MQRankSum=-3.940;QD=11.02;ReadPosRankSum=1.310;VQSLOD=1.8000;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:60.07:0,60,866	0/0:4,0:4:12.01:0,12,140	0/0:23,0:21:47.85:0,48,733	0/0:20,0:13:30.02:0,30,394	0/0:25,0:25:72.17:0,72,1013	0/0:9,0:9:21.07:0,21,291	0/0:20,0:20:60.20:0,60,877	0/0:27,0:26:69.21:0,69,1006	0/0:11,0:11:33.11:0,33,486	0/0:21,0:21:63.18:0,63,894	0/0:20,0:20:51.17:0,51,760	1/1:3,4:7:12.04:144,12,0	0/0:16,0:16:48.16:0,48,716	0/0:14,0:14:42.10:0,42,602	0/0:22,0:22:54.18:0,54,794	0/0:22,0:21:63.21:0,63,923	0/0:30,0:30:78.25:0,78,1135	0/0:21,0:21:63.19:0,63,921	0/0:23,0:23:69.20:0,69,979	0/0:19,0:19:57.18:0,57,818	0/0:17,0:17:45.02:0,45,633	0/0:10,0:10:30.10:0,30,448	1/1:9,5:14:15.05:181,15,0	1/1:0,5:5:8.94:92,9,0	0/0:22,0:22:54.18:0,54,798	0/0:9,0:9:24.05:0,24,327	0/0:18,0:18:51.06:0,51,719	0/0:7,0:7:21.07:0,21,315
chr10	35867180	.	TTTTTCAGCAAGG	T	1196.37	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=5.093;DP=478;FS=4.271;HRun=0;HaplotypeScore=175.4923;InbreedingCoeff=0.9479;MQ=80.56;MQ0=0;MQRankSum=-5.089;QD=85.45;ReadPosRankSum=1.869;VQSLOD=3.7052;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:66.21:0,66,3637	0/0:4,0:4:12.04:0,12,752	0/0:23,0:24:60.21:0,60,3150	0/0:18,0:13:30.07:0,30,1313	0/0:25,0:25:72.25:0,72,3728	0/0:10,0:10:24.01:0,24,1167	0/0:20,0:20:60.13:0,60,2672	0/0:26,0:25:75.22:0,75,4150	0/0:13,0:13:39.09:0,39,2190	0/0:23,0:23:69.20:0,69,3503	0/0:18,0:18:48.15:0,48,2402	1/1:0,4:4:12.04:448,12,0	0/0:18,0:18:54.16:0,54,2882	0/0:15,0:15:45.15:0,45,2663	0/0:22,0:22:57.15:0,57,3132	0/0:25,0:24:66.23:0,66,4076	0/0:28,0:28:78.22:0,78,4495	0/0:22,0:22:66.23:0,66,4104	0/0:22,0:22:63.18:0,63,3448	0/0:20,0:20:57.11:0,57,3207	0/0:18,0:18:51.13:0,51,2651	0/0:12,0:12:36.12:0,36,1756	1/1:0,5:5:15.05:560,15,0	1/1:0,5:5:8.97:319,9,0	0/0:20,0:20:51.13:0,51,2863	0/0:10,0:10:24.08:0,24,1450	0/0:17,0:17:48.12:0,48,2273	0/0:8,0:8:24.08:0,24,1498
chr10	35868257	.	AGACCC	A	996.43	PASS	AB=0.961;AC=22;AF=0.423;AN=52;BaseQRankSum=1.856;DP=282;FS=32.893;HRun=0;HaplotypeScore=82.4536;InbreedingCoeff=-0.6027;MQ=38.84;MQ0=5;MQRankSum=-3.675;QD=4.47;ReadPosRankSum=1.344;VQSLOD=-0.2323;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:11:21.41:0,21,247	0/1:6,0:5:21.04:21,0,105	./.	./.	0/1:13,0:13:22.23:22,0,82	0/1:11,0:11:99:138,0,140	0/1:11,0:10:12.43:12,0,251	0/1:20,0:20:20.82:21,0,483	1/1:8,0:8:6.68:18,7,0	0/1:6,0:5:80.45:88,0,80	0/1:15,0:16:24.48:24,0,248	0/1:12,1:10:73.05:73,0,257	0/1:10,0:9:49.41:49,0,157	0/1:5,0:5:26.31:26,0,108	0/1:12,0:12:99:125,0,140	0/1:13,0:13:12.19:12,0,72	0/0:14,0:14:18.51:0,19,212	0/0:12,0:9:15.48:0,15,254	0/1:13,0:12:37.74:38,0,315	0/1:9,0:9:35.25:35,0,160	0/0:8,0:8:9.44:0,9,207	0/1:8,0:8:20.85:21,0,62	0/1:9,3:12:99:110,0,112	0/1:2,3:5:68.41:81,0,68	0/1:8,0:8:31.37:31,0,125	0/1:10,1:11:99:154,0,147	0/1:13,0:13:47.76:48,0,160	0/0:8,0:8:7.41:0,7,95
chr10	35868290	.	AAG	A	441.79	PASS	AB=1.000;AC=10;AF=0.179;AN=56;BaseQRankSum=1.615;DP=416;FS=9.064;HRun=0;HaplotypeScore=73.4137;InbreedingCoeff=0.5885;MQ=54.15;MQ0=32;MQRankSum=-3.120;QD=5.74;ReadPosRankSum=-3.553;VQSLOD=0.4274;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:4,12:14:15.50:155,15,0	0/0:9,0:8:9.13:0,9,123	0/0:25,0:8:9.92:0,10,132	0/0:27,0:7:4.04:0,4,40	0/0:10,0:10:6.41:0,6,70	0/0:14,0:14:23.64:0,24,219	0/0:12,0:12:10.17:0,10,110	0/0:39,0:36:24.47:0,24,428	0/0:10,0:10:4.62:0,5,10	0/0:16,0:13:35.91:0,36,365	0/0:17,0:17:32.99:0,33,365	1/1:8,0:8:20.60:138,21,0	0/0:11,0:10:20.40:0,20,176	0/0:6,0:4:7.85:0,8,69	0/0:7,0:7:17.71:0,18,191	0/0:15,0:15:21.98:0,22,123	0/0:16,0:15:1.81:0,2,24	0/1:15,0:10:2.69:3,0,96	0/0:29,0:25:54.71:0,55,490	0/1:15,0:15:2.45:2,0,239	0/0:15,0:13:10.99:0,11,119	0/0:5,0:5:8.86:0,9,84	1/1:16,0:15:32.17:248,32,0	1/1:7,0:5:5.85:45,6,0	0/0:11,0:10:18.61:0,19,182	0/0:25,0:23:12.05:0,12,465	0/0:15,0:13:25.57:0,26,283	0/0:5,0:4:2.27:0,2,70
chr10	35869516	.	CA	C	622.89	PASS	AB=0.939;AC=13;AF=0.232;AN=56;BaseQRankSum=5.623;DP=562;FS=0.548;HRun=12;HaplotypeScore=69.9762;InbreedingCoeff=0.3652;MQ=76.26;MQ0=7;MQRankSum=0.262;QD=3.39;ReadPosRankSum=2.309;VQSLOD=-0.2233;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,17:19:24.31:205,24,0	0/0:10,0:10:27.03:0,27,261	0/1:41,0:17:8.10:8,0,34	0/0:42,1:20:1.54:0,2,76	0/1:37,0:37:40.71:63,0,41	0/0:19,0:21:47.71:0,48,422	0/0:11,0:11:17.94:0,18,151	0/0:27,0:29:53.69:0,54,468	0/0:21,0:21:11.05:0,11,80	0/0:23,0:23:42.05:0,42,403	0/0:30,0:30:62.92:0,63,601	1/1:5,11:16:29.86:232,30,0	0/0:10,0:10:29.99:0,30,280	0/0:22,0:23:56.83:0,57,509	0/0:13,0:13:24.03:0,24,230	0/1:16,0:16:0.43:0,0,65	0/1:15,0:15:7.85:8,0,17	0/1:7,0:7:11.20:11,0,72	0/0:19,0:19:48.02:0,48,452	0/0:35,1:36:57.71:0,58,709	0/0:9,0:9:17.07:0,17,158	0/1:11,0:11:2.20:2,0,154	0/1:3,9:12:5.11:126,0,5	1/1:5,5:10:17.61:127,18,0	0/0:27,2:28:42.84:0,43,578	0/0:24,0:25:58.54:0,59,596	0/0:19,1:21:17.07:0,17,312	0/0:4,0:4:8.85:0,9,75
chr10	35869528	.	AT	A	1005.72	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=5.260;DP=569;FS=1.098;HRun=11;HaplotypeScore=69.6098;InbreedingCoeff=0.9023;MQ=76.19;MQ0=10;MQRankSum=2.635;QD=11.69;ReadPosRankSum=0.996;VQSLOD=3.3869;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:19.10:0,19,98	0/0:9,0:9:21.05:0,21,218	0/0:52,1:18:17.12:0,17,184	0/0:52,0:23:15.07:0,15,109	1/1:8,30:38:91.33:635,91,0	0/0:20,0:20:47.99:0,48,444	0/0:11,0:11:25.83:0,26,228	0/0:30,0:30:57.01:0,57,529	1/1:4,14:18:15.31:143,15,0	0/0:20,0:20:54.03:0,54,516	0/0:28,0:28:72.68:0,73,656	0/0:14,0:14:18.50:0,18,78	0/0:14,0:14:38.76:0,39,344	0/0:25,0:25:60.60:0,61,527	0/0:11,0:11:29.81:0,30,271	1/1:3,12:15:26.96:220,27,0	1/1:2,13:15:20.90:164,21,0	0/0:7,0:7:10.02:0,10,113	0/0:23,0:23:51.03:0,51,482	0/0:32,0:32:76:0,76,750	0/0:8,0:8:21.02:0,21,205	0/0:9,0:9:22.84:0,23,209	0/0:13,0:13:13.02:0,13,105	0/0:8,0:8:3.18:0,3,46	0/0:28,0:27:69.82:0,70,648	0/0:26,1:27:47.17:0,47,629	0/0:17,0:17:47.38:0,47,417	0/0:3,0:3:8.98:0,9,82
chr10	35869797	.	CAGA	C	6572.14	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=13.583;DP=617;FS=1.163;HRun=0;HaplotypeScore=90.0082;InbreedingCoeff=0.9980;MQ=73.63;MQ0=0;MQRankSum=-2.647;QD=40.32;ReadPosRankSum=5.120;VQSLOD=6.0623;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,23:23:54.18:921,54,0	0/0:7,0:7:21.07:0,21,485	0/0:21,0:20:54.19:0,54,1199	0/0:25,0:24:63.21:0,63,1370	1/1:1,34:35:81.19:1319,81,0	0/0:33,0:33:99:0,99,2282	0/0:20,0:20:60.21:0,60,1384	0/0:39,0:39:99:0,111,2491	1/1:0,12:12:27.09:460,27,0	0/0:22,0:22:66.23:0,66,1522	0/0:25,0:25:75.26:0,75,1730	1/1:0,22:22:57.20:972,57,0	0/0:23,0:23:66.23:0,66,1522	0/0:20,0:20:60.21:0,60,1384	0/0:23,0:23:66.23:0,66,1504	1/1:1,19:20:45.15:752,45,0	1/1:1,18:19:41.79:715,42,0	0/0:8,0:8:24.08:0,24,553	0/0:25,0:25:72.25:0,72,1610	0/0:28,0:28:84.29:0,84,1914	0/0:26,0:26:75.26:0,75,1730	0/0:17,0:17:51.18:0,51,1174	1/1:1,19:20:54.18:921,54,0	1/1:0,12:12:30.10:512,30,0	0/0:20,0:20:60.18:0,60,1335	0/0:24,0:24:69.24:0,69,1591	0/0:41,0:41:99:0,120,2678	0/0:7,0:7:21.07:0,21,484
chr10	35871165	.	TC	T	2844.44	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=7.930;DP=577;FS=2.430;HRun=1;HaplotypeScore=68.8631;InbreedingCoeff=0.9940;MQ=65.82;MQ0=5;MQRankSum=-1.557;QD=17.14;ReadPosRankSum=-5.585;VQSLOD=2.0450;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:28:32.40:229,32,0	0/0:7,0:7:21.07:0,21,264	0/0:21,0:18:30.66:0,31,431	0/0:16,0:11:26.75:0,27,264	1/1:10,8:18:45.15:522,45,0	0/0:23,0:23:69.19:0,69,841	0/0:21,0:21:63.14:0,63,729	0/0:21,0:21:59.86:0,60,693	1/1:8,10:18:51.47:568,51,0	0/0:31,0:31:87.27:0,87,1088	0/0:20,0:20:60.12:0,60,735	1/1:15,0:15:13.13:106,13,0	0/0:22,0:22:66.13:0,66,761	0/0:11,0:11:33.09:0,33,402	0/0:33,0:33:94.58:0,95,1129	1/1:16,7:23:57.36:621,57,0	1/1:10,9:18:47.69:549,48,0	0/0:16,0:16:48.06:0,48,545	0/0:23,0:22:63.12:0,63,754	0/0:29,0:29:85.09:0,85,991	0/0:16,0:16:48.14:0,48,591	0/0:16,0:16:22.29:0,22,511	1/1:18,2:19:31.19:311,31,0	1/1:25,0:25:24.70:147,25,0	0/0:16,0:16:48.13:0,48,577	0/0:28,0:28:81.20:0,81,952	0/0:25,0:25:72.12:0,72,846	0/0:16,0:16:47.97:0,48,522
chr10	35871280	.	TG	T	5919.62	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=13.021;DP=532;FS=1.137;HRun=1;HaplotypeScore=53.5513;InbreedingCoeff=0.9802;MQ=64.85;MQ0=0;MQRankSum=-2.475;QD=34.42;ReadPosRankSum=3.831;VQSLOD=4.5951;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,38:38:90.30:1255,90,0	0/0:8,0:8:24.08:0,24,350	0/0:12,0:12:28.06:0,28,398	0/0:10,0:9:5.60:0,6,231	1/1:1,24:25:74.80:861,75,0	0/0:20,0:20:60.20:0,60,862	0/0:28,0:28:84.24:0,84,1159	0/0:34,0:34:99:0,99,1297	1/1:0,16:16:45.15:628,45,0	0/0:21,0:21:60.19:0,60,844	0/0:13,0:13:39.13:0,39,564	1/1:0,12:12:24.08:335,24,0	0/0:21,0:21:63.16:0,63,878	0/0:18,0:18:54.12:0,54,710	0/0:22,0:22:66.19:0,66,925	1/1:0,14:14:36.12:503,36,0	1/1:1,34:35:90.30:1254,90,0	0/0:16,0:16:48.16:0,48,686	0/0:20,0:20:60.14:0,60,797	0/0:16,0:16:41.56:0,42,636	0/0:23,0:23:69.18:0,69,948	0/0:11,0:11:33.06:0,33,452	1/1:0,16:16:39.03:499,39,0	1/1:0,16:16:42.14:586,42,0	0/0:12,0:12:36.11:0,36,509	0/0:17,0:17:51.17:0,51,746	0/0:28,0:28:84.21:0,84,1146	0/0:10,0:10:30.04:0,30,393
chr10	35871567	.	C	CA	341.62	PASS	AB=0.797;AC=7;AF=0.130;AN=54;BaseQRankSum=6.208;DP=340;FS=51.559;HRun=0;HaplotypeScore=46.5912;InbreedingCoeff=-0.1712;MQ=38.63;MQ0=60;MQRankSum=-4.783;QD=3.45;ReadPosRankSum=2.230;VQSLOD=1.3082;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:12,4:7:23.75:24,0,85	0/0:4,0:3:6.02:0,6,69	0/0:6,0:1:2.92:0,3,17	./.	0/1:10,4:12:99:136,0,135	0/0:15,0:14:27.06:0,27,347	0/0:13,0:6:12.04:0,12,156	0/0:29,0:27:78:0,78,1001	0/0:7,3:7:18.06:0,18,232	0/0:15,0:13:30.10:0,30,407	0/0:10,0:10:17.97:0,18,250	0/1:6,6:11:99:146,0,179	0/0:13,0:11:30.07:0,30,412	0/0:11,0:11:29.13:0,29,376	0/0:8,0:8:15.05:0,15,209	0/1:12,2:13:34.53:35,0,371	0/1:17,4:18:30.93:31,0,458	0/0:8,0:8:21.03:0,21,271	0/0:17,0:10:30.06:0,30,386	0/0:10,0:9:24.08:0,24,325	0/0:13,0:11:27.08:0,27,351	0/0:7,0:7:18.06:0,18,245	0/1:8,1:6:19.50:20,0,60	0/1:8,5:11:78.18:78,0,136	0/0:14,0:11:24.08:0,24,323	0/0:14,0:11:30.10:0,30,408	0/0:11,0:11:23.99:0,24,294	0/0:7,0:1:3.01:0,3,42
chr10	35871575	.	AGAACC	A	789.47	PASS	AB=0.920;AC=13;AF=0.232;AN=56;BaseQRankSum=4.174;DP=373;FS=3.243;HRun=0;HaplotypeScore=66.9231;InbreedingCoeff=-0.2667;MQ=39.25;MQ0=59;MQRankSum=-1.551;QD=3.99;ReadPosRankSum=-1.078;VQSLOD=1.4784;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:13,4:8:44.50:44,0,100	0/1:3,0:2:0:0,0,0	0/0:9,0:2:3.48:0,3,57	0/0:12,0:1:3.01:0,3,31	0/1:12,1:11:89.33:89,0,156	0/0:13,0:12:22.03:0,22,486	0/1:12,0:8:21.93:22,0,252	0/1:29,0:25:37.84:38,0,1140	0/0:5,3:5:12.04:0,12,280	0/0:14,0:14:23.12:0,23,765	0/1:11,0:11:5.97:6,0,421	0/1:10,4:13:99:193,0,313	0/0:11,0:9:25.09:0,25,459	0/1:13,0:12:52.79:53,0,412	0/0:10,0:10:23.95:0,24,464	0/1:11,2:12:99:121,0,363	0/1:19,4:18:99:147,0,440	0/1:18,0:18:9.33:9,0,491	0/0:15,0:11:14.95:0,15,570	0/0:13,0:13:32.73:0,33,550	0/0:9,0:7:18.10:0,18,293	0/0:8,0:8:23.76:0,24,421	0/0:9,0:6:12.17:0,12,179	0/1:8,5:11:99:148,0,187	0/0:16,0:13:32.48:0,32,565	0/1:19,0:16:62.26:62,0,724	0/0:15,0:15:33.91:0,34,494	0/0:11,0:2:1.76:0,2,41
chr10	35871590	.	A	ACC	188.66	PASS	AB=0.909;AC=6;AF=0.107;AN=56;BaseQRankSum=0.252;DP=467;FS=24.748;HRun=0;HaplotypeScore=79.9049;InbreedingCoeff=0.1138;MQ=50.93;MQ0=65;MQRankSum=4.441;QD=1.85;ReadPosRankSum=-3.152;VQSLOD=-0.5833;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:18:18.76:19,0,190	0/0:7,0:6:12.04:0,12,175	0/0:35,0:8:14.07:0,14,126	0/0:36,0:10:8.35:0,8,53	0/1:14,0:10:15.09:15,0,46	0/0:14,0:13:33.06:0,33,402	0/0:10,0:7:18.05:0,18,215	0/0:28,0:24:60.67:0,61,808	1/1:3,1:6:3.01:44,3,0	0/0:15,0:15:39.12:0,39,537	0/0:11,0:10:25.29:0,25,325	0/0:15,0:13:22.09:0,22,218	0/0:13,0:11:32.58:0,33,384	0/0:13,0:11:27.03:0,27,288	0/0:12,0:12:27.08:0,27,350	0/1:13,1:12:59.03:141,0,59	0/1:23,8:35:88.46:88,0,243	0/0:20,0:20:47.77:0,48,561	0/0:15,0:14:36.11:0,36,471	0/0:11,0:10:29.62:0,30,323	0/0:6,0:4:8.33:0,8,98	0/0:8,0:8:21.01:0,21,251	0/0:14,0:11:28.30:0,28,291	0/0:11,0:9:9.74:0,10,75	0/0:20,0:18:45.15:0,45,590	0/0:26,0:25:73.85:0,74,926	0/0:13,0:13:31.97:0,32,404	0/0:12,0:3:7.54:0,8,53
chr10	35872006	.	T	TACACACAC	5606.78	PASS	AB=0.929;AC=50;AF=0.926;AN=54;BaseQRankSum=-1.338;DP=647;FS=0.000;HRun=0;HaplotypeScore=217.2210;InbreedingCoeff=0.2428;MQ=56.19;MQ0=24;MQRankSum=-0.286;QD=10.72;ReadPosRankSum=2.209;VQSLOD=3.2868;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:27:3.24:9,3,0	1/1:8,2:10:6.02:230,6,0	0/0:60,0:24:2.74:0,3,12	./.	1/1:19,0:19:4.81:29,5,0	1/1:14,0:18:3.34:29,3,0	1/1:19,3:25:9.97:245,10,0	1/1:19,0:19:18.06:456,18,0	1/1:19,0:19:15.05:323,15,0	1/1:12,3:16:21.05:568,21,0	1/1:13,4:17:3.01:52,3,0	1/1:22,0:22:6.89:100,7,0	1/1:23,1:24:8.86:276,9,0	1/1:16,1:22:12.04:410,12,0	1/1:15,1:21:6.70:201,7,0	1/1:23,0:22:9.50:185,10,0	1/1:16,0:14:5.05:101,5,0	1/1:12,1:20:18.05:464,18,0	1/1:11,0:11:10.03:162,10,0	1/1:12,0:17:2.56:103,3,0	1/1:33,0:32:4.26:89,4,0	0/1:20,0:24:0:0,0,0	1/1:16,0:16:3.01:65,3,0	0/1:26,0:26:0.18:1,0,0	1/1:15,2:18:6.02:187,6,0	1/1:17,0:17:27.09:806,27,0	1/1:22,0:29:6.02:184,6,0	1/1:5,3:8:12.04:332,12,0
chr10	35874245	.	GAA	G	1264.60	PASS	AB=0.833;AC=17;AF=0.304;AN=56;BaseQRankSum=8.374;DP=522;FS=1.538;HRun=16;HaplotypeScore=67.1375;InbreedingCoeff=0.8574;MQ=53.97;MQ0=14;MQRankSum=1.965;QD=7.53;ReadPosRankSum=6.986;VQSLOD=0.2094;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,3:27:35.23:191,35,0	0/0:7,0:7:11.47:0,11,106	0/0:7,0:4:3.01:0,3,37	0/1:4,0:2:2.02:7,0,2	1/1:6,11:19:29.47:235,29,0	0/0:18,0:16:42.68:0,43,431	0/0:18,0:17:27.70:0,28,326	0/0:20,2:27:6.91:0,7,449	1/1:9,10:20:17.57:137,18,0	0/0:21,0:20:44.34:0,44,422	0/0:17,0:19:18.33:0,18,287	1/1:7,0:18:24.60:106,25,0	0/0:14,0:15:26.96:0,27,276	0/0:25,0:25:51.01:0,51,594	0/0:18,2:23:2.56:0,3,424	1/1:6,11:15:26.78:226,27,0	1/1:6,13:17:38.89:322,39,0	0/0:21,0:18:35.35:0,35,405	0/0:19,0:22:39.65:0,40,390	0/0:20,0:23:41.46:0,41,407	0/0:12,0:13:19.75:0,20,193	0/0:14,0:16:23.98:0,24,251	1/1:5,0:13:8.11:42,8,0	1/1:6,0:23:46.61:200,47,0	0/0:8,0:11:13.76:0,14,120	0/0:20,1:22:18.70:0,19,372	0/0:24,0:23:39.93:0,40,460	0/0:10,1:10:14.37:0,14,146
chr10	35874649	.	CT	C	909.16	PASS	AB=0.882;AC=18;AF=0.321;AN=56;BaseQRankSum=4.340;DP=497;FS=1.702;HRun=15;HaplotypeScore=61.9076;InbreedingCoeff=0.1917;MQ=68.92;MQ0=7;MQRankSum=2.155;QD=3.58;ReadPosRankSum=2.268;VQSLOD=0.0877;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,19:29:22.32:251,22,0	0/0:7,0:8:17.84:0,18,146	0/0:19,0:11:5.98:0,6,46	0/1:16,0:11:23.42:23,0,29	0/0:10,1:24:20.43:0,20,173	0/0:16,1:18:9.89:0,10,239	0/1:15,3:18:11.15:11,0,134	0/0:30,0:29:21.08:0,21,183	0/1:7,1:15:6.50:7,0,32	0/0:17,1:19:16.52:0,17,249	0/1:6,1:9:1.43:1,0,102	1/1:7,3:12:18.05:95,18,0	0/0:15,1:17:8.45:0,8,183	0/1:8,3:12:25.03:25,0,72	0/1:11,2:13:36.31:36,0,76	0/0:8,0:17:20.35:0,20,132	0/0:15,0:22:43.54:0,44,264	0/0:13,0:14:17.04:0,17,123	0/1:19,2:22:8.79:9,0,153	0/0:12,1:14:17.08:0,17,167	0/1:11,1:13:18.65:19,0,74	0/1:11,3:14:10.28:10,0,42	1/1:8,11:20:30.41:184,30,0	1/1:10,24:35:60.46:379,60,0	0/0:14,0:11:17.91:0,18,143	0/0:16,1:16:9.05:0,9,185	0/1:17,4:21:35.53:36,0,171	0/0:8,0:8:14.80:0,15,110
chr10	35875528	.	A	AG	3935.25	PASS	AB=0.979;AC=41;AF=0.732;AN=56;BaseQRankSum=-5.098;DP=499;FS=66.218;HRun=0;HaplotypeScore=64.5427;InbreedingCoeff=-0.0353;MQ=62.94;MQ0=39;MQRankSum=5.873;QD=8.52;ReadPosRankSum=4.780;VQSLOD=0.7736;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,16:19:19.07:354,19,0	1/1:5,0:5:7.28:21,7,0	0/0:22,0:8:13.60:0,14,89	0/0:14,0:7:5.81:0,6,85	1/1:4,18:20:37.04:377,37,0	0/1:13,0:12:7.74:28,0,8	0/1:9,0:9:3.83:55,0,4	0/1:27,0:21:13.83:197,0,14	1/1:2,14:14:36.03:370,36,0	0/1:14,0:12:6.40:27,0,6	0/1:17,0:16:45.39:82,0,45	1/1:3,12:16:17.35:248,17,0	0/1:19,1:19:26.52:27,0,58	0/1:21,1:22:12.20:100,0,12	0/1:23,0:22:11.94:63,0,12	1/1:1,20:21:36.49:392,36,0	1/1:8,21:24:46.75:538,47,0	0/1:21,0:16:31.03:31,0,38	1/1:22,0:20:28.62:198,29,0	1/1:20,0:19:16.15:77,16,0	1/1:16,0:10:6.98:55,7,0	0/1:5,1:6:7.81:66,0,8	1/1:1,8:10:11.91:121,12,0	1/1:3,7:8:4.42:92,4,0	1/1:15,1:15:25.32:130,25,0	1/1:18,0:15:6.56:149,7,0	0/1:29,0:26:74.19:97,0,74	1/1:17,0:14:11.91:40,12,0
chr10	35875744	.	G	GAAA	5186.21	PASS	AB=0.591;AC=35;AF=0.625;AN=56;BaseQRankSum=-4.262;DP=576;FS=48.571;HRun=14;HaplotypeScore=72.9999;InbreedingCoeff=0.7989;MQ=56.11;MQ0=13;MQRankSum=-1.161;QD=16.36;ReadPosRankSum=-1.049;VQSLOD=-0.3360;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:48.67:0,49,426	1/1:7,3:10:19.11:260,19,0	0/0:54,0:8:7.18:0,7,42	0/0:45,0:7:3.07:0,3,21	0/0:22,0:26:55.78:0,56,473	1/1:2,6:10:8.99:97,9,0	1/1:7,7:17:14.92:176,15,0	1/1:11,14:28:50.73:566,51,0	0/0:16,0:16:40.46:0,40,373	1/1:11,16:28:41.11:515,41,0	1/1:6,12:23:31.26:373,31,0	0/0:8,0:23:23.54:0,24,163	1/1:2,8:12:15.03:204,15,0	1/1:6,15:21:12.04:209,12,0	1/1:8,10:20:18.06:294,18,0	0/0:24,0:26:44.67:0,45,568	0/0:17,0:22:46.90:0,47,467	1/1:4,8:12:15.05:232,15,0	1/1:33,0:34:72.24:790,72,0	1/1:4,12:16:25.90:377,26,0	0/1:4,2:13:4.92:143,0,5	1/1:2,0:2:3.01:32,3,0	0/0:7,0:12:0.22:0,0,40	0/0:4,0:11:23.35:0,23,139	1/1:3,0:9:8.97:68,9,0	1/1:9,16:25:16.79:456,17,0	1/1:14,2:26:21.50:271,22,0	1/1:4,0:9:9.01:122,9,0
chr10	35878940	.	TA	T	10251.94	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-0.839;DP=470;FS=5.010;HRun=9;HaplotypeScore=59.8234;InbreedingCoeff=0.8744;MQ=60.89;MQ0=6;MQRankSum=-2.123;QD=22.29;ReadPosRankSum=3.143;VQSLOD=5.8506;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,29:34:60.74:668,61,0	1/1:1,4:5:14.98:131,15,0	0/0:2,0:1:3.01:0,3,35	0/0:8,0:7:17.85:0,18,163	1/1:0,21:21:59.90:530,60,0	1/1:1,19:20:57.02:521,57,0	1/1:2,12:14:35.93:318,36,0	1/1:9,23:30:31.53:535,32,0	1/1:1,14:15:33.02:302,33,0	1/1:4,24:28:75.03:684,75,0	1/1:5,17:21:54.01:490,54,0	1/1:1,14:15:39.02:357,39,0	1/1:1,13:14:39.02:356,39,0	1/1:0,12:12:36.02:329,36,0	1/1:3,12:15:39.01:353,39,0	1/1:4,11:15:29.99:270,30,0	1/1:2,16:18:42.01:384,42,0	1/1:3,12:15:33.01:298,33,0	1/1:5,13:15:39.02:357,39,0	1/1:6,15:20:53.91:475,54,0	1/1:2,6:8:15:137,15,0	1/1:1,6:6:18.01:165,18,0	1/1:2,16:18:45.02:412,45,0	1/1:1,10:11:24.01:220,24,0	1/1:4,22:26:66.03:604,66,0	1/1:5,24:28:80.99:726,81,0	1/1:3,15:18:45.01:412,45,0	1/1:1,8:8:24.01:220,24,0
chr10	35879007	.	GT	G	13064.83	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=6.535;DP=515;FS=3.015;HRun=1;HaplotypeScore=66.0505;InbreedingCoeff=0.9847;MQ=75.43;MQ0=0;MQRankSum=-4.022;QD=39.95;ReadPosRankSum=0.151;VQSLOD=5.3959;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:69.22:0,69,1075	1/1:1,9:10:27.09:367,27,0	0/0:15,0:14:36.12:0,36,562	0/0:8,0:8:6.55:0,7,207	0/0:30,0:30:90.31:0,90,1438	1/1:2,18:20:54.15:730,54,0	1/1:0,15:15:45.15:629,45,0	1/1:0,24:24:72.23:984,72,0	0/0:15,0:15:36.12:0,36,575	1/1:2,24:26:78.25:1074,78,0	1/1:1,28:29:87.29:1208,87,0	0/0:10,0:10:27.09:0,27,431	1/1:2,13:15:45.15:625,45,0	1/1:1,14:15:42.14:585,42,0	1/1:0,16:16:48.16:662,48,0	0/0:23,0:23:66.23:0,66,1053	0/0:22,0:22:63.21:0,63,1006	1/1:0,14:14:42.14:580,42,0	1/1:0,15:15:42.11:537,42,0	1/1:0,29:29:84.21:1148,84,0	1/1:1,7:8:21.07:293,21,0	1/1:0,12:12:33.07:439,33,0	0/0:25,0:25:72.09:0,72,1116	0/0:13,0:13:33.10:0,33,494	1/1:0,26:26:75.25:1047,75,0	1/1:0,23:23:69.21:943,69,0	1/1:0,20:20:57.19:796,57,0	1/1:0,10:10:30.10:419,30,0
chr10	35879915	.	G	GA	1459.27	PASS	AB=0.590;AC=13;AF=0.232;AN=56;BaseQRankSum=-0.851;DP=445;FS=13.593;HRun=8;HaplotypeScore=56.2267;InbreedingCoeff=0.5780;MQ=62.34;MQ0=30;MQRankSum=0.241;QD=11.77;ReadPosRankSum=-0.011;VQSLOD=1.0894;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:13,21:29:99:411,0,105	0/0:3,0:3:3:0,3,27	0/0:28,0:14:16.68:0,17,177	0/0:35,0:12:18.73:0,19,136	1/1:3,14:11:24.03:262,24,0	0/0:13,0:13:29.93:0,30,265	0/0:6,0:6:14.99:0,15,132	0/0:47,0:39:99:0,99,899	1/1:3,3:3:6.02:69,6,0	0/0:13,0:12:27:0,27,242	0/0:18,0:18:39:0,39,352	1/1:7,9:12:27.03:285,27,0	0/0:7,0:7:14.94:0,15,133	0/0:14,0:13:27.01:0,27,247	0/0:14,0:14:32.96:0,33,292	1/1:3,5:4:8.98:82,9,0	0/1:9,19:25:31.22:425,0,31	0/0:22,0:21:45.02:0,45,412	0/0:21,0:18:45.02:0,45,411	0/0:17,0:17:21.94:0,22,312	0/0:10,0:9:24.01:0,24,220	0/0:4,0:4:12.01:0,12,110	1/1:3,7:5:3.01:35,3,0	0/1:1,4:3:18.43:60,0,18	0/0:6,0:6:14.98:0,15,133	0/0:22,0:22:62.97:0,63,564	0/0:12,0:12:20.97:0,21,187	0/0:6,0:6:18.01:0,18,165
chr10	35879942	.	TA	T	2740.40	PASS	AB=0.683;AC=40;AF=0.714;AN=56;BaseQRankSum=-5.815;DP=469;FS=1.810;HRun=13;HaplotypeScore=66.8988;InbreedingCoeff=0.7158;MQ=70.61;MQ0=11;MQRankSum=-0.784;QD=9.89;ReadPosRankSum=1.390;VQSLOD=3.1676;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:32:37.21:0,37,306	0/1:1,1:2:15.91:16,0,18	0/0:47,0:17:8.50:0,9,63	0/0:45,0:22:16.36:0,16,155	0/0:21,0:19:49.11:0,49,430	1/1:4,14:17:26.76:191,27,0	1/1:4,5:8:13.96:93,14,0	1/1:18,20:36:54.73:403,55,0	0/0:8,0:7:11.80:0,12,91	1/1:2,8:11:22.90:158,23,0	1/1:9,6:15:17.46:118,17,0	1/1:6,7:12:26.68:188,27,0	0/1:4,3:7:20.44:25,0,20	1/1:4,9:13:20.87:153,21,0	1/1:6,8:13:14.90:109,15,0	0/0:6,0:5:9.01:0,9,87	0/0:26,1:26:13.30:0,13,375	1/1:7,10:17:13.16:170,13,0	1/1:11,9:20:18.90:175,19,0	1/1:9,10:18:9.41:209,9,0	1/1:7,3:9:12.56:79,13,0	1/1:2,1:3:2.98:22,3,0	1/1:3,2:3:5.97:44,6,0	1/1:3,3:5:8.91:65,9,0	1/1:5,4:8:19.02:126,19,0	1/1:8,18:25:48.90:338,49,0	1/1:7,5:11:19.51:136,20,0	1/1:2,6:9:16.93:115,17,0
chr10	35880049	.	G	GAAGCGC	6823.82	PASS	AB=0.867;AC=25;AF=0.463;AN=54;BaseQRankSum=-0.197;DP=538;FS=28.285;HRun=0;HaplotypeScore=137.8089;InbreedingCoeff=-0.7427;MQ=43.05;MQ0=57;MQRankSum=-7.824;QD=14.64;ReadPosRankSum=-5.122;VQSLOD=1.1127;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:29,5:32:99:384,0,1232	0/0:7,0:7:9.03:0,9,213	./.	0/0:28,0:3:3.01:0,3,32	0/1:14,6:18:99:173,0,735	0/1:16,1:17:99:125,0,717	0/1:18,4:21:99:204,0,870	0/1:23,2:21:99:180,0,551	0/1:10,0:10:89.23:89,0,356	0/1:21,4:23:99:543,0,800	0/1:14,5:17:99:283,0,602	1/1:6,9:16:30.10:1027,30,0	0/1:7,3:10:99:292,0,396	0/1:16,5:23:99:168,0,808	0/1:26,0:25:99:124,0,1163	0/1:11,2:14:70.26:70,0,743	0/1:14,5:19:99:271,0,873	0/1:17,3:20:99:233,0,874	0/1:13,1:15:99:221,0,529	0/1:19,2:19:99:355,0,664	0/1:15,1:15:99:219,0,738	0/1:12,1:13:88.28:88,0,537	0/1:8,2:11:99:148,0,333	0/0:10,2:12:24.01:0,24,518	0/1:13,8:22:99:630,0,590	0/1:21,0:22:99:121,0,672	0/1:23,7:30:99:417,0,1225	0/1:14,0:11:99:458,0,186
chr10	35880939	.	T	TA	285.72	PASS	AB=1.000;AC=4;AF=0.077;AN=52;BaseQRankSum=-2.068;DP=257;FS=32.546;HRun=6;HaplotypeScore=26.7888;InbreedingCoeff=0.3049;MQ=66.81;MQ0=3;MQRankSum=1.994;QD=12.99;ReadPosRankSum=0.621;VQSLOD=0.6245;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,13:13:30.10:377,30,0	0/0:4,0:4:12.01:0,12,116	0/1:4,0:4:2.18:2,0,25	0/1:4,0:4:2.53:3,0,51	0/0:6,0:6:15.03:0,15,153	0/0:24,0:23:60.13:0,60,612	0/0:3,0:3:9.01:0,9,86	0/0:35,0:35:93.19:0,93,941	0/0:4,0:3:9.02:0,9,89	0/0:8,0:8:18.04:0,18,184	0/0:3,0:3:6.01:0,6,61	0/0:3,0:1:3.01:0,3,31	0/0:3,0:3:6.01:0,6,61	0/0:6,0:6:15.03:0,15,153	0/0:3,0:3:6.01:0,6,61	0/0:5,0:4:12.03:0,12,122	0/0:24,0:22:57.12:0,57,581	0/0:17,0:17:48.04:0,48,469	0/0:19,0:19:42.09:0,42,427	0/0:4,0:4:3:0,3,31	0/0:2,0:2:6.01:0,6,61	./.	./.	0/0:4,0:4:9.02:0,9,92	0/0:18,0:18:51.11:0,51,519	0/0:12,0:9:24.04:0,24,239	0/0:7,0:6:12.02:0,12,122	0/0:20,0:20:54.12:0,54,550
chr10	35881131	.	GA	G	4947.61	PASS	AB=0.625;AC=45;AF=0.833;AN=54;BaseQRankSum=-5.543;DP=362;FS=17.606;HRun=9;HaplotypeScore=48.0164;InbreedingCoeff=0.0566;MQ=72.08;MQ0=18;MQRankSum=1.545;QD=14.95;ReadPosRankSum=3.802;VQSLOD=3.2848;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:4,17:19:24.19:312,0,24	1/1:0,4:2:3:27,3,0	0/1:17,1:11:15.26:15,0,122	0/0:31,0:21:36.02:0,36,295	0/1:1,10:10:4.60:217,0,5	1/1:0,18:13:39.02:357,39,0	1/1:1,3:4:9:82,9,0	1/1:5,17:12:26.99:243,27,0	0/1:2,11:12:1.57:241,0,2	1/1:2,10:8:18.01:164,18,0	1/1:1,4:3:9:82,9,0	1/1:2,9:8:18.01:165,18,0	1/1:1,18:14:42.02:384,42,0	1/1:1,8:9:24.01:220,24,0	1/1:2,9:10:24.01:220,24,0	0/1:2,18:16:24.15:312,0,24	0/1:4,18:20:94.68:300,0,95	1/1:2,13:13:33.02:302,33,0	1/1:4,5:6:9:82,9,0	1/1:3,13:11:18:165,18,0	1/1:3,9:12:21:192,21,0	./.	1/1:0,2:2:6:55,6,0	0/1:6,4:9:19.59:95,0,20	1/1:0,10:10:21.01:192,21,0	1/1:2,12:10:21:192,21,0	1/1:2,13:9:24.01:220,24,0	1/1:0,6:6:12.01:110,12,0
chr10	35884501	.	T	TAAA	3171.63	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-5.886;DP=585;FS=4.933;HRun=8;HaplotypeScore=85.1291;InbreedingCoeff=0.9887;MQ=72.11;MQ0=0;MQRankSum=-4.110;QD=44.05;ReadPosRankSum=1.973;VQSLOD=3.8075;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,14:22:48.12:889,48,0	0/0:4,0:4:12.04:0,12,157	0/0:17,0:17:33.07:0,33,427	0/0:15,0:15:35.36:0,35,381	0/0:27,0:27:63.19:0,63,828	0/0:25,0:26:72.20:0,72,929	0/0:22,0:22:57.12:0,57,716	0/0:35,0:35:75.18:0,75,960	0/0:21,0:21:51.12:0,51,641	0/0:21,0:21:63.20:0,63,828	0/0:18,0:18:36.10:0,36,473	1/1:4,13:19:51.15:961,51,0	0/0:26,0:26:63.18:0,63,826	0/0:23,0:23:60.18:0,60,786	0/0:24,0:24:60.16:0,60,788	0/0:24,0:24:69.22:0,69,903	0/0:24,0:24:63.20:0,63,828	0/0:23,0:23:57.17:0,57,747	0/0:19,0:19:48.13:0,48,631	0/0:14,0:14:36.11:0,36,473	0/0:14,0:14:39.12:0,39,512	0/0:23,0:22:51.13:0,51,670	1/1:2,20:22:57.20:1118,57,0	1/1:2,7:9:18.06:363,18,0	0/0:19,0:19:54.17:0,54,708	0/0:35,0:35:75.17:0,75,970	0/0:30,0:30:81.24:0,81,1064	0/0:9,0:9:27.09:0,27,354
chr10	35884745	.	TACACAC	T	925.57	PASS	AC=18;AF=0.900;AN=20;DP=168;FS=0.000;HRun=0;HaplotypeScore=39.6531;InbreedingCoeff=0.0628;MQ=24.18;MQ0=68;QD=13.41;VQSLOD=1.7394;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	1/1:3,1:5:3.01:63,3,0	./.	./.	./.	./.	1/1:4,1:3:3.01:63,3,0	./.	./.	1/1:5,2:8:9.03:175,9,0	1/1:1,2:5:6.02:126,6,0	./.	./.	./.	./.	./.	./.	./.	./.	1/1:3,6:14:9.03:190,9,0	./.	1/1:5,2:9:3.01:63,3,0	0/0:7,0:7:0:0,0,1	./.	1/1:1,3:7:9.03:190,9,0	1/1:5,2:8:3.01:63,3,0	1/1:6,1:7:3.01:63,3,0	./.
chr10	35885332	.	TACACAC	T	266.35	PASS	AB=0.895;AC=11;AF=0.786;AN=14;BaseQRankSum=-0.573;DP=114;FS=0.000;HRun=0;HaplotypeScore=36.1089;MQ=17.78;MQ0=76;MQRankSum=1.203;QD=9.51;ReadPosRankSum=1.203;VQSLOD=1.3375;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	0/0:6,0:7:2.04:0,2,6	./.	./.	./.	./.	1/1:1,1:1:3.01:36,3,0	./.	./.	./.	./.	./.	./.	0/1:15,2:6:54.23:54,0,129	1/1:2,1:1:3.01:63,3,0	./.	./.	./.	./.	./.	./.	1/1:0,1:1:3.01:63,3,0	1/1:2,1:2:3.01:63,3,0	./.	1/1:1,1:2:3.01:63,3,0
chr10	35885406	.	ACGCGCG	A	1796.87	PASS	AB=1.000;AC=30;AF=0.938;AN=32;BaseQRankSum=1.636;DP=127;FS=0.000;HRun=0;HaplotypeScore=48.4950;InbreedingCoeff=0.2278;MQ=35.92;MQ0=26;MQRankSum=1.444;QD=18.72;ReadPosRankSum=1.636;VQSLOD=2.1310;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	1/1:1,0:1:0.47:1,0,0	./.	./.	./.	./.	1/1:10,1:11:14.96:204,15,0	1/1:4,0:2:3.01:63,3,0	./.	1/1:8,0:7:15.01:240,15,0	./.	./.	0/1:5,0:3:0:0,0,0	1/1:5,0:2:6.02:106,6,0	1/1:3,0:2:3.01:54,3,0	./.	1/1:7,3:8:9.03:174,9,0	1/1:10,2:10:18.04:319,18,0	1/1:6,0:4:3.66:115,4,0	1/1:4,0:4:3.01:54,3,0	./.	1/1:5,1:6:9.03:189,9,0	0/1:5,0:4:0:0,0,0	./.	./.	1/1:7,0:5:6.02:115,6,0	1/1:4,0:3:6.02:115,6,0	1/1:2,1:3:6.02:119,6,0
chr10	35885423	.	CGCGCGCGTGTGTGTGT	C	2345.26	PASS	AB=0.897;AC=28;AF=0.778;AN=36;BaseQRankSum=0.375;DP=140;FS=17.346;HRun=0;HaplotypeScore=54.6228;InbreedingCoeff=0.2088;MQ=37.94;MQ0=20;MQRankSum=0.408;QD=22.34;ReadPosRankSum=3.343;VQSLOD=-0.0237;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:1,0:1:0.47:0,0,1	./.	./.	./.	./.	0/1:11,1:12:54.30:186,0,54	1/1:1,0:1:3.01:63,3,0	0/1:3,0:3:0:0,0,0	1/1:3,8:9:15.84:422,16,0	./.	./.	1/1:1,5:5:0.47:1,0,0	1/1:4,0:2:6.02:106,6,0	1/1:0,3:3:3.01:143,3,0	./.	0/1:11,0:9:10.45:123,0,10	1/1:13,0:11:20.84:405,21,0	1/1:8,0:7:6.63:157,7,0	1/1:2,3:4:3.01:143,3,0	0/1:3,3:4:0:0,0,0	1/1:7,1:7:9.03:213,9,0	0/0:6,0:5:2.64:0,3,58	./.	./.	1/1:0,5:5:9:226,9,0	1/1:5,1:4:8.99:135,9,0	1/1:3,0:2:6.02:119,6,0
chr10	35885544	.	C	CAA	8802.74	PASS	AB=1.000;AC=53;AF=0.946;AN=56;BaseQRankSum=-3.543;DP=348;FS=17.382;HRun=10;HaplotypeScore=47.8784;InbreedingCoeff=0.4391;MQ=73.45;MQ0=1;MQRankSum=-4.236;QD=26.20;ReadPosRankSum=1.514;VQSLOD=2.8109;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:13:3.01:34,3,0	1/1:0,1:1:3.01:45,3,0	0/0:11,0:12:19.60:0,20,174	0/1:8,0:8:10.45:10,0,49	1/1:4,15:20:44.55:573,45,0	1/1:0,8:9:27.08:386,27,0	1/1:1,10:13:26.12:306,26,0	1/1:4,11:17:10.45:462,10,0	1/1:0,6:6:12.04:179,12,0	1/1:3,15:18:48.12:673,48,0	1/1:0,7:8:20.56:277,21,0	1/1:6,0:9:9.01:86,9,0	1/1:1,7:11:20.55:254,21,0	1/1:1,5:7:12.04:172,12,0	1/1:1,14:16:27.09:402,27,0	1/1:0,10:10:27.09:394,27,0	1/1:6,20:31:62.66:847,63,0	1/1:5,17:24:53.65:734,54,0	1/1:4,12:16:37.33:516,37,0	1/1:1,7:10:26.02:300,26,0	1/1:2,9:14:31.57:384,32,0	1/1:0,6:7:20.66:279,21,0	1/1:5,0:13:9:80,9,0	1/1:3,0:14:15.02:143,15,0	1/1:1,4:5:6.02:89,6,0	1/1:1,9:11:28.28:342,28,0	1/1:0,11:13:35.60:484,36,0	1/1:0,7:9:26.57:351,27,0
chr10	35886236	.	C	CT	1790.46	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-8.684;DP=578;FS=6.894;HRun=1;HaplotypeScore=55.2171;InbreedingCoeff=0.9973;MQ=82.05;MQ0=0;MQRankSum=-3.133;QD=36.54;ReadPosRankSum=0.695;VQSLOD=3.5746;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:51.11:0,51,616	0/0:7,0:7:21.07:0,21,273	0/0:21,0:21:48.62:0,49,617	0/0:23,0:23:60.19:0,60,777	0/0:26,0:26:78.24:0,78,997	0/0:26,0:26:72.22:0,72,920	0/0:16,0:16:48.16:0,48,623	0/0:28,0:28:81.24:0,81,1017	0/0:11,0:11:33.09:0,33,413	0/0:24,0:24:66.20:0,66,836	0/0:16,0:17:45.14:0,45,573	1/1:0,28:28:78.26:1169,78,0	0/0:15,0:15:45.15:0,45,584	0/0:20,0:20:60.19:0,60,767	0/0:22,0:22:66.20:0,66,842	0/0:35,0:35:99:0,102,1324	0/0:22,0:22:60.19:0,60,779	0/0:12,0:12:36.10:0,36,451	0/0:22,0:22:66.19:0,66,830	0/0:15,0:15:42.14:0,42,545	0/0:19,0:19:57.18:0,57,738	0/0:18,0:18:51.15:0,51,648	1/1:1,11:12:26.74:404,27,0	1/1:1,8:9:24.08:359,24,0	0/0:19,0:19:54.18:0,54,701	0/0:27,0:27:81.26:0,81,1052	0/0:37,0:37:99:0,111,1426	0/0:29,0:29:78.25:0,78,1013
chr10	35886845	.	AT	A	2270.82	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=10.982;DP=562;FS=0.000;HRun=8;HaplotypeScore=61.5365;InbreedingCoeff=0.9977;MQ=75.70;MQ0=0;MQRankSum=-1.021;QD=20.83;ReadPosRankSum=2.268;VQSLOD=3.7854;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,47:51:99:1100,114,0	0/0:8,0:8:24.07:0,24,290	0/0:12,1:13:27.08:0,27,317	0/0:13,1:14:29.65:0,30,314	0/0:20,0:20:60.17:0,60,713	0/0:21,0:21:55.41:0,55,655	0/0:20,0:20:57.05:0,57,639	0/0:24,0:24:66.20:0,66,797	0/0:27,0:27:75.22:0,75,891	0/0:23,0:23:63.19:0,63,760	0/0:18,0:18:48.14:0,48,571	1/1:2,21:23:60.10:579,60,0	0/0:21,0:21:51.16:0,51,616	0/0:25,0:25:72.16:0,72,841	0/0:23,0:23:66.19:0,66,787	0/0:13,0:13:33.02:0,33,356	0/0:22,0:22:54.16:0,54,646	0/0:8,0:8:24.07:0,24,287	0/0:25,0:25:63.19:0,63,760	0/0:16,0:16:45.14:0,45,543	0/0:23,0:23:60.18:0,60,725	0/0:16,0:16:48.15:0,48,577	1/1:1,9:10:23.78:232,24,0	1/1:3,22:25:54.08:521,54,0	0/0:13,0:13:36.11:0,36,435	0/0:25,0:25:72.22:0,72,870	0/0:21,0:21:60.13:0,60,687	0/0:14,0:14:39.10:0,39,458
chr10	35886952	.	CAG	C	988.22	PASS	AB=1.000;AC=6;AF=0.107;AN=56;BaseQRankSum=3.601;DP=745;FS=7.354;HRun=0;HaplotypeScore=165.5967;InbreedingCoeff=0.4640;MQ=53.86;MQ0=7;MQRankSum=2.429;QD=8.30;ReadPosRankSum=1.034;VQSLOD=3.0579;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,39:48:26.75:801,27,0	0/0:14,0:13:17.92:0,18,143	0/0:25,0:19:8.98:0,9,421	0/0:31,0:19:37.22:0,37,434	0/0:27,0:26:32.96:0,33,293	0/0:29,0:29:29.78:0,30,290	0/0:39,0:39:49.20:0,49,446	0/0:31,0:31:72.49:0,72,762	0/0:24,0:24:47.99:0,48,457	0/0:22,0:22:36.88:0,37,411	0/0:20,0:20:11.30:0,11,132	0/1:25,0:25:29.24:86,0,29	0/0:29,0:29:47.77:0,48,461	0/0:26,0:25:29.93:0,30,295	0/0:44,0:44:65.90:0,66,631	0/0:33,0:33:63.01:0,63,673	0/0:32,0:32:60.28:0,60,618	0/0:10,0:10:15.02:0,15,186	0/0:22,0:22:39.48:0,39,408	0/0:17,0:14:9:0,9,105	0/0:45,0:45:77.75:0,78,619	0/0:26,0:25:29.95:0,30,250	1/1:19,0:19:0.20:104,0,0	0/1:27,0:27:9.05:120,0,9	0/0:15,0:13:5.47:0,5,34	0/0:30,0:28:39.03:0,39,468	0/0:22,0:21:23.94:0,24,270	0/0:13,0:12:20.96:0,21,182
chr10	35887354	.	C	CCA	1334.26	PASS	AB=0.839;AC=5;AF=0.089;AN=56;BaseQRankSum=5.249;DP=646;FS=9.931;HRun=0;HaplotypeScore=144.1173;InbreedingCoeff=0.6988;MQ=53.20;MQ0=14;MQRankSum=-4.991;QD=17.33;ReadPosRankSum=0.076;VQSLOD=3.1038;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:23,6:28:5.34:523,5,0	0/0:5,0:5:9.03:0,9,138	0/0:43,0:23:49.19:0,49,670	0/0:33,0:22:42.32:0,42,571	0/0:16,0:16:30.10:0,30,459	0/0:15,0:15:10.25:0,10,261	0/0:36,0:36:77.22:0,77,1344	0/0:42,0:36:65.36:0,65,1387	0/0:26,0:25:24.25:0,24,388	0/0:22,0:22:50.95:0,51,828	0/0:11,0:11:21.03:0,21,292	1/1:12,10:22:9.85:453,10,0	0/0:18,0:17:38.98:0,39,544	0/0:22,0:21:36.11:0,36,548	0/0:35,0:35:65.35:0,65,915	0/0:30,0:30:48.02:0,48,681	0/0:15,0:15:26.12:0,26,371	0/0:11,0:11:21.07:0,21,301	0/0:31,0:27:50.96:0,51,1030	0/0:13,0:13:18:0,18,390	0/0:52,0:52:57.07:0,57,972	0/0:24,0:23:41.92:0,42,617	0/0:5,0:5:1.71:0,2,6	0/1:20,5:26:1.62:471,0,2	0/0:15,0:15:8.49:0,8,178	0/0:26,0:25:66.21:0,66,1051	0/0:13,0:11:33.03:0,33,450	0/0:10,0:10:17.99:0,18,188
chr10	35887363	.	ACC	A	51.02	PASS	AB=0.819;AC=2;AF=0.036;AN=56;BaseQRankSum=5.409;DP=638;FS=15.009;HRun=5;HaplotypeScore=160.5609;InbreedingCoeff=-0.0599;MQ=51.96;MQ0=14;MQRankSum=-4.010;QD=0.93;ReadPosRankSum=-1.857;VQSLOD=-0.6281;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,3:26:8.27:0,8,273	0/0:5,0:5:11.96:0,12,181	0/0:37,1:21:25.08:0,25,365	0/0:27,0:16:12.61:0,13,487	0/0:14,0:14:23.97:0,24,400	0/0:17,0:17:17.11:0,17,257	0/0:36,2:38:22.81:0,23,1327	0/0:39,0:33:90.25:0,90,1518	0/0:28,0:27:28.12:0,28,439	0/0:21,1:22:9.78:0,10,780	0/0:11,1:12:20.83:0,21,375	0/1:15,11:26:99:120,0,126	0/0:19,0:18:29.94:0,30,501	0/0:20,0:19:32.68:0,33,568	0/0:36,0:36:60.12:0,60,1016	0/0:27,0:27:44.92:0,45,718	0/0:17,0:17:23.60:0,24,352	0/0:16,0:16:2.97:0,3,251	0/1:27,2:24:17.25:17,0,811	0/0:12,0:12:14.78:0,15,321	0/0:55,0:55:54.32:0,54,835	0/0:21,0:20:26.80:0,27,526	0/0:6,0:6:5.94:0,6,45	0/0:20,3:23:17.24:0,17,145	0/0:15,1:16:20.93:0,21,252	0/0:29,0:28:71.90:0,72,1169	0/0:12,0:10:28.91:0,29,491	0/0:7,0:7:6.02:0,6,93
chr10	35887377	.	CCCATT	C	125.56	PASS	AB=0.936;AC=8;AF=0.143;AN=56;BaseQRankSum=7.535;DP=618;FS=1.505;HRun=0;HaplotypeScore=181.3661;InbreedingCoeff=-0.1910;MQ=49.73;MQ0=14;MQRankSum=-6.197;QD=0.63;ReadPosRankSum=-1.819;VQSLOD=2.6253;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,6:22:23.28:0,23,569	0/0:5,0:6:3.39:0,3,196	0/1:35,1:21:36.64:37,0,1352	0/0:28,1:17:36:0,36,1038	0/0:14,0:14:20.77:0,21,669	0/0:17,0:17:10.43:0,10,348	0/0:30,1:36:56.65:0,57,2025	0/0:28,2:24:69.24:0,69,2259	0/1:37,0:36:30.26:30,0,344	0/1:15,0:17:31.11:31,0,720	0/0:9,0:9:18.14:0,18,391	0/1:27,2:29:5.54:6,0,584	0/0:17,0:16:23.72:0,24,527	0/0:24,0:23:24.91:0,25,654	0/0:36,0:36:26.61:0,27,808	0/0:29,0:29:38.88:0,39,650	0/1:17,1:18:46.89:47,0,410	0/1:14,1:15:68.10:68,0,311	0/1:24,1:21:21.62:22,0,1381	0/0:8,0:8:8.23:0,8,261	0/0:46,0:46:31.44:0,31,850	0/0:26,0:25:6.20:0,6,651	0/0:4,1:5:5.97:0,6,106	0/1:14,8:22:16.21:16,0,158	0/0:18,0:18:15.09:0,15,314	0/0:26,0:25:50.75:0,51,1268	0/0:12,0:10:22.29:0,22,693	0/0:7,0:7:5.04:0,5,32
chr10	35887381	.	TTAC	T	237.76	PASS	AB=0.915;AC=12;AF=0.214;AN=56;BaseQRankSum=6.617;DP=589;FS=3.296;HRun=0;HaplotypeScore=163.5738;InbreedingCoeff=-0.2765;MQ=49.44;MQ0=12;MQRankSum=-6.891;QD=0.98;ReadPosRankSum=-2.012;VQSLOD=2.2115;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:21:26.41:0,26,148	0/1:3,2:5:23.91:24,0,136	0/0:37,0:25:29.93:0,30,1248	0/0:31,0:17:38.71:0,39,737	0/0:15,0:15:20.74:0,21,455	0/1:17,0:17:64.10:64,0,180	0/1:25,9:34:73.21:73,0,1375	0/0:28,0:24:69.24:0,69,1551	0/1:34,2:35:66.62:67,0,197	0/1:9,4:13:36.19:36,0,442	0/0:8,1:9:14.51:0,15,212	0/1:22,0:22:18.56:19,0,89	0/0:17,0:16:19.48:0,19,291	0/1:18,2:19:3.92:4,0,387	0/1:32,1:33:1.78:2,0,436	0/0:25,0:25:27.26:0,27,385	0/1:16,0:16:11.57:12,0,237	0/1:15,0:15:37.13:37,0,198	0/1:20,3:20:32.46:32,0,1025	0/1:9,0:9:8.32:8,0,174	0/0:48,0:48:26.34:0,26,573	0/0:26,0:25:14.23:0,14,416	0/0:5,0:5:5.54:0,6,27	0/0:21,0:21:6.88:0,7,45	0/0:19,0:19:15.76:0,16,210	0/0:25,0:24:53.73:0,54,892	0/0:10,2:10:1.66:0,2,495	0/0:6,0:6:2.74:0,3,12
chr10	35887382	.	TAC	T	701.17	PASS	AB=0.994;AC=19;AF=0.339;AN=56;BaseQRankSum=8.390;DP=597;FS=2.610;HRun=0;HaplotypeScore=159.2180;InbreedingCoeff=0.1452;MQ=48.16;MQ0=12;MQRankSum=-8.797;QD=2.79;ReadPosRankSum=-2.187;VQSLOD=2.3718;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:14,9:22:12.80:193,13,0	0/1:5,0:5:27.77:28,0,78	0/0:39,0:25:59.66:0,60,904	0/0:29,0:16:29.59:0,30,464	0/0:15,0:15:14.95:0,15,256	0/1:17,0:17:62.06:62,0,78	0/1:34,0:34:81.72:82,0,892	0/0:28,0:24:54.18:0,54,891	0/1:36,0:35:49.30:49,0,53	0/1:14,0:14:45.45:45,0,345	0/0:8,0:8:5.77:0,6,102	1/1:11,12:23:38.95:268,39,0	0/0:18,0:17:7.08:0,7,99	0/0:20,0:19:11.37:0,11,242	0/0:33,0:33:4.71:0,5,192	0/0:25,0:25:19.31:0,19,210	0/0:17,0:17:8.29:0,8,100	0/1:15,0:15:19:19,0,87	0/1:23,0:20:16.52:17,0,669	0/1:9,0:9:9.18:9,0,90	0/0:49,0:49:23.12:0,23,343	0/0:26,0:25:7.21:0,7,247	1/1:1,4:5:5.89:37,6,0	1/1:15,7:22:7.48:45,7,0	0/1:18,1:19:8.48:8,0,110	0/0:24,1:24:14.44:0,14,502	0/0:12,0:10:4.76:0,5,315	1/1:6,0:6:2.68:11,3,0
chr10	35887395	.	T	TACACACACCCTAC	18021.07	PASS	AB=0.533;AC=51;AF=0.911;AN=56;BaseQRankSum=-3.318;DP=733;FS=4.508;HRun=0;HaplotypeScore=201.5624;InbreedingCoeff=0.5447;MQ=52.01;MQ0=6;MQRankSum=-1.166;QD=26.86;ReadPosRankSum=2.933;VQSLOD=4.0163;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:18:39.07:938,39,0	1/1:3,0:5:8.71:310,9,0	0/0:35,0:27:46.77:0,47,702	0/0:26,0:17:40.18:0,40,594	1/1:3,13:20:14.15:168,14,0	1/1:2,17:20:15.05:763,15,0	1/1:23,0:43:84.17:2204,84,0	1/1:18,0:25:63.04:936,63,0	1/1:8,25:45:26.37:991,26,0	1/1:8,0:19:47.47:1252,47,0	1/1:7,0:14:8.58:124,9,0	1/1:4,0:23:45.05:1051,45,0	1/1:3,19:27:12.04:571,12,0	1/1:6,19:32:5.74:290,6,0	1/1:6,27:44:21.06:934,21,0	1/1:5,21:31:15.52:822,16,0	1/1:3,13:21:12:272,12,0	0/1:3,12:24:25.31:384,0,25	1/1:17,0:27:57.02:1457,57,0	1/1:0,11:13:14.98:428,15,0	1/1:11,38:79:9.90:104,10,0	1/1:4,23:33:6.07:155,6,0	1/1:0,0:5:8.65:206,9,0	1/1:9,0:21:39.06:805,39,0	1/1:1,22:26:5.64:647,6,0	1/1:3,18:26:28.51:1556,29,0	1/1:11,0:14:18.02:460,18,0	1/1:0,4:7:3.01:193,3,0
chr10	35887401	.	C	CA	452.95	PASS	AB=0.992;AC=21;AF=0.375;AN=56;BaseQRankSum=5.493;DP=691;FS=4.035;HRun=1;HaplotypeScore=173.1593;InbreedingCoeff=-0.3319;MQ=52.91;MQ0=6;MQRankSum=-3.275;QD=1.08;ReadPosRankSum=5.192;VQSLOD=-0.6662;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:21:1.19:0,1,125	0/0:4,0:4:0.88:0,1,12	0/0:38,0:28:60.61:0,61,774	0/0:30,0:21:52.71:0,53,572	0/1:18,0:18:5.88:6,0,79	1/1:17,0:16:11.26:38,11,0	0/0:41,0:41:20.36:0,20,358	0/1:22,0:22:43.09:166,0,43	0/1:38,1:38:40.30:40,0,56	0/1:18,0:18:44.09:44,0,77	0/1:15,0:15:8.61:9,0,78	0/0:25,0:25:18.90:0,19,177	0/1:27,0:26:12.12:12,0,31	0/1:31,1:31:3.55:4,0,21	0/1:43,0:43:29.71:30,0,69	0/1:24,1:25:22.50:47,0,22	0/1:21,0:21:27.18:34,0,27	0/1:20,0:21:10.42:12,0,10	0/1:24,0:23:22.78:23,0,226	0/1:15,0:15:25.49:25,0,83	0/0:67,0:68:3.53:0,4,139	0/0:29,0:28:5.65:0,6,71	0/1:6,0:6:0.13:0,0,28	0/1:24,0:24:56.30:56,0,140	0/1:25,0:25:8.65:9,0,106	0/1:22,1:23:39.78:40,0,141	0/0:15,0:13:15.40:0,15,199	1/1:4,0:4:2.60:10,3,0
chr10	35887414	.	C	CCCCCT	2335.35	PASS	AB=0.985;AC=18;AF=0.321;AN=56;BaseQRankSum=8.116;DP=750;FS=10.280;HRun=0;HaplotypeScore=197.6967;InbreedingCoeff=-0.3483;MQ=54.84;MQ0=6;MQRankSum=-7.027;QD=5.46;ReadPosRankSum=1.691;VQSLOD=1.9136;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:25:55.35:0,55,1046	0/1:4,0:4:10.31:10,0,132	0/0:40,0:28:74.03:0,74,1375	0/0:29,0:21:60.18:0,60,1204	0/0:18,0:18:20.74:0,21,481	0/1:18,0:17:59.59:60,0,143	0/1:41,0:41:99:482,0,999	0/0:20,0:20:30.20:0,30,1157	0/1:36,0:36:99:169,0,373	0/1:24,1:25:99:225,0,888	0/0:13,1:14:21.07:0,21,480	0/0:28,0:28:56.53:0,57,1223	0/1:29,0:29:90.14:90,0,255	0/1:32,0:32:40.02:40,0,486	0/1:44,0:44:99:148,0,613	0/1:24,0:24:99:164,0,284	0/1:29,0:29:99:116,0,575	0/1:27,0:27:99:155,0,346	0/1:27,0:25:99:137,0,1145	0/1:18,0:18:75.57:76,0,402	0/0:71,0:71:35.53:0,36,794	0/0:36,0:35:20.05:0,20,705	0/0:10,0:10:27.09:0,27,557	0/0:30,0:30:48.87:0,49,1264	0/1:25,0:25:99:129,0,428	0/1:26,0:26:99:262,0,1025	0/1:11,3:14:99:187,0,475	1/1:3,0:3:3.01:46,3,0
chr10	35889304	.	A	AT	11316.45	PASS	AB=0.967;AC=45;AF=0.804;AN=56;BaseQRankSum=-9.940;DP=623;FS=4.525;HRun=8;HaplotypeScore=71.3641;InbreedingCoeff=0.8905;MQ=80.58;MQ0=0;MQRankSum=-2.107;QD=23.38;ReadPosRankSum=0.562;VQSLOD=5.5294;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,0:20:48.37:246,48,0	1/1:0,10:10:27.08:312,27,0	0/0:31,0:30:29.62:0,30,308	0/1:28,1:26:6.97:7,0,218	0/0:29,0:29:72.02:0,72,659	1/1:1,21:21:51.15:589,51,0	1/1:1,23:24:63.19:727,63,0	1/1:7,26:34:78.05:870,78,0	0/0:25,0:25:72.02:0,72,655	1/1:5,27:32:75.22:866,75,0	1/1:2,19:21:57.13:643,57,0	1/1:1,0:8:17.15:90,17,0	1/1:1,18:19:45.13:519,45,0	1/1:3,22:25:57.17:658,57,0	1/1:4,22:26:60.18:693,60,0	0/0:28,0:28:84.05:0,84,769	0/0:24,0:24:69.04:0,69,631	1/1:2,16:18:45.13:519,45,0	1/1:6,11:17:8.61:341,9,0	1/1:2,23:25:66.20:762,66,0	1/1:2,24:26:60.18:691,60,0	1/1:2,16:18:48.14:554,48,0	1/1:2,0:14:22.83:119,23,0	1/1:2,0:14:34.01:174,34,0	1/1:1,16:17:39.12:450,39,0	1/1:4,17:21:51.15:589,51,0	1/1:2,29:31:57.17:658,57,0	1/1:3,10:13:21.06:242,21,0
chr10	35889818	.	A	AGG	8797.10	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-8.072;DP=500;FS=0.000;HRun=8;HaplotypeScore=83.7449;InbreedingCoeff=0.9542;MQ=83.75;MQ0=0;MQRankSum=-2.770;QD=23.09;ReadPosRankSum=-0.758;VQSLOD=3.7472;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,0:17:8.98:77,9,0	1/1:0,4:4:12.04:190,12,0	0/0:13,0:14:31.97:0,32,297	0/0:16,0:17:33.89:0,34,340	0/0:23,0:23:57.12:0,57,623	1/1:4,25:30:65.37:999,65,0	1/1:4,11:16:33.58:525,34,0	1/1:12,12:25:30.10:473,30,0	0/0:18,0:18:48.08:0,48,521	1/1:4,14:19:40.02:618,40,0	1/1:2,7:10:14.54:199,15,0	1/1:5,16:23:39.13:619,39,0	1/1:4,9:14:29.59:422,30,0	1/1:4,12:18:29.07:398,29,0	1/1:6,14:20:36.59:563,37,0	0/0:21,0:21:60.16:0,60,669	0/0:25,0:25:57.10:0,57,623	1/1:2,11:15:21.07:333,21,0	1/1:8,4:15:20.55:266,21,0	1/1:6,9:16:20.51:266,21,0	1/1:11,14:29:34.58:454,35,0	1/1:3,17:22:35.09:493,35,0	1/1:1,9:12:14.42:198,14,0	1/1:5,10:16:17.55:247,18,0	1/1:6,4:11:8.52:104,9,0	1/1:6,10:16:30.06:448,30,0	1/1:2,24:26:42.14:666,42,0	1/1:0,7:7:15.05:238,15,0
chr10	35890758	.	T	TTG	1015.62	PASS	AB=0.924;AC=17;AF=0.370;AN=46;BaseQRankSum=-2.451;DP=556;FS=4.254;HRun=0;HaplotypeScore=84.1203;InbreedingCoeff=-0.1704;MQ=72.27;MQ0=12;MQRankSum=1.093;QD=3.40;ReadPosRankSum=-1.446;VQSLOD=1.9605;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:29:12.78:0,13,67	./.	./.	./.	0/1:18,0:18:25.90:38,0,26	./.	0/1:24,1:26:20.45:20,0,184	1/1:36,0:35:3.48:40,3,0	1/1:9,4:13:12.03:159,12,0	1/1:25,0:25:3.01:44,3,0	0/0:8,0:8:1.16:0,1,29	0/1:11,4:15:2.11:121,0,2	0/0:14,0:14:3.01:0,3,33	0/0:19,0:18:6.01:0,6,65	0/0:20,0:20:9.02:0,9,97	0/1:17,1:18:20.29:116,0,20	0/1:23,5:29:74.12:74,0,109	0/1:20,1:26:72.08:72,0,131	./.	0/0:13,0:13:8.84:0,9,70	0/1:27,0:27:12.93:13,0,85	0/1:12,0:15:52.43:52,0,63	0/1:2,0:2:17.36:18,0,17	0/1:21,11:32:31.54:357,0,32	0/0:13,0:15:20.70:0,21,181	0/0:18,0:21:9.32:0,9,79	0/1:11,1:14:29.64:30,0,69	0/0:7,0:7:2.98:0,3,22
chr10	35890964	.	CT	C	5659.75	PASS	AB=0.769;AC=51;AF=0.911;AN=56;BaseQRankSum=-4.676;DP=396;FS=26.767;HRun=11;HaplotypeScore=44.2422;InbreedingCoeff=0.2902;MQ=73.77;MQ0=2;MQRankSum=-3.107;QD=15.01;ReadPosRankSum=2.991;VQSLOD=3.3381;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,17:19:38.95:320,39,0	1/1:0,6:6:14.98:123,15,0	0/0:19,0:8:8.81:0,9,72	0/1:23,0:10:6.25:6,0,116	1/1:6,17:23:26.69:369,27,0	1/1:3,20:23:50.94:419,51,0	1/1:3,5:8:11.98:98,12,0	1/1:12,21:33:46.21:467,46,0	1/1:2,3:5:5.99:49,6,0	1/1:6,12:18:35.86:288,36,0	1/1:2,8:10:17.96:148,18,0	1/1:2,9:11:23.97:197,24,0	1/1:2,4:6:8.99:74,9,0	1/1:4,9:13:20.97:172,21,0	1/1:0,9:9:17.98:148,18,0	1/1:2,8:10:20.97:172,21,0	1/1:3,17:20:38.95:320,39,0	1/1:2,14:16:38.95:320,39,0	1/1:3,12:16:5.48:228,5,0	0/1:6,3:9:21.72:41,0,22	1/1:3,4:7:14.92:117,15,0	1/1:2,2:4:5.99:49,6,0	1/1:2,6:8:17.98:148,18,0	1/1:1,5:6:14.98:123,15,0	1/1:4,10:14:38.81:306,39,0	1/1:4,23:27:65.83:531,66,0	0/1:3,11:15:8.22:131,0,8	1/1:1,16:17:35.96:296,36,0
chr10	35891569	.	AT	A	10916.03	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-3.373;DP=597;FS=4.925;HRun=10;HaplotypeScore=77.9029;InbreedingCoeff=0.8970;MQ=80.88;MQ0=2;MQRankSum=-5.286;QD=20.79;ReadPosRankSum=4.731;VQSLOD=5.6534;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,30:33:83.98:729,84,0	1/1:3,9:12:17.97:156,18,0	0/0:33,0:21:19.93:0,20,218	0/0:39,0:29:46.94:0,47,436	1/1:4,18:22:23.81:436,24,0	1/1:1,23:24:65.98:573,66,0	1/1:1,10:11:23.99:208,24,0	1/1:5,22:27:56.88:495,57,0	1/1:3,17:20:14.81:358,15,0	1/1:4,30:34:79.69:675,80,0	1/1:1,20:21:56.98:495,57,0	1/1:2,18:20:47.99:417,48,0	1/1:2,9:11:26.99:234,27,0	1/1:4,12:16:29.98:261,30,0	1/1:0,32:32:77.95:677,78,0	1/1:0,19:19:56.99:495,57,0	1/1:1,22:23:65.99:573,66,0	1/1:3,11:14:25.65:232,26,0	1/1:3,17:20:50.96:436,51,0	1/1:2,18:20:53.95:463,54,0	1/1:4,12:16:2.81:253,3,0	1/1:1,17:18:50.95:436,51,0	1/1:1,16:17:41.99:365,42,0	1/1:0,12:12:29.99:260,30,0	1/1:2,17:19:41.99:365,42,0	1/1:1,17:18:50.95:434,51,0	1/1:3,27:30:58.19:631,58,0	1/1:4,12:16:29.97:260,30,0
chr10	35891872	.	CTTT	C	6454.01	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-8.409;DP=404;FS=22.054;HRun=13;HaplotypeScore=63.1180;InbreedingCoeff=0.8659;MQ=64.00;MQ0=0;MQRankSum=-2.064;QD=20.82;ReadPosRankSum=-0.095;VQSLOD=1.6807;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:21:31.13:0,31,231	1/1:1,4:6:11.90:127,12,0	0/0:12,0:9:8.56:0,9,82	0/0:13,0:9:11.95:0,12,134	1/1:0,10:10:20.73:222,21,0	1/1:0,10:10:21.06:255,21,0	1/1:3,12:15:21:255,21,0	1/1:11,36:48:99:1150,102,0	1/1:3,11:14:27.03:328,27,0	1/1:0,8:8:23.95:260,24,0	1/1:2,11:13:20.87:210,21,0	0/0:1,0:4:5.98:0,6,46	1/1:1,7:7:12.03:146,12,0	1/1:1,5:6:12.03:143,12,0	1/1:0,11:11:15.05:182,15,0	1/1:2,8:11:11.95:127,12,0	1/1:5,18:23:29.67:364,30,0	1/1:1,11:12:18.03:219,18,0	1/1:1,19:20:53.19:613,53,0	1/1:2,10:12:26.71:298,27,0	1/1:5,18:23:33:400,33,0	1/1:2,9:11:23.95:259,24,0	0/0:4,0:18:29.24:0,29,214	0/0:2,0:22:39.73:0,40,298	1/1:0,10:10:27.08:323,27,0	1/1:3,9:13:22.39:265,22,0	1/1:4,11:15:2.16:233,2,0	1/1:7,4:11:5.97:73,6,0
chr10	35891982	.	CT	C	457.91	PASS	AB=0.930;AC=13;AF=0.232;AN=56;BaseQRankSum=6.662;DP=296;FS=3.739;HRun=12;HaplotypeScore=36.9069;InbreedingCoeff=0.3884;MQ=69.71;MQ0=8;MQRankSum=2.399;QD=5.09;ReadPosRankSum=1.457;VQSLOD=0.6697;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,21:25:53.77:417,54,0	0/0:2,0:2:5.97:0,6,51	0/0:12,0:6:9.21:0,9,63	0/1:19,0:14:28.09:28,0,77	0/0:12,0:12:27.04:0,27,269	0/0:8,0:6:15.03:0,15,152	0/0:4,0:4:12.02:0,12,122	0/0:42,0:42:80.88:0,81,781	0/0:7,0:8:14.86:0,15,136	0/0:8,0:8:15.03:0,15,152	0/0:12,1:13:1.26:0,1,180	1/1:1,2:3:2.99:23,3,0	0/0:3,0:3:6.01:0,6,58	0/0:3,0:2:3.01:0,3,30	0/0:12,0:10:21.04:0,21,213	0/0:7,0:7:9.02:0,9,91	0/0:29,0:28:34.07:0,34,503	0/1:19,3:21:21.62:22,0,348	0/1:9,1:9:5.21:5,0,129	0/0:7,0:7:15.02:0,15,147	0/0:4,0:2:3.01:0,3,30	1/1:2,0:2:2.98:21,3,0	1/1:4,3:7:8.96:69,9,0	1/1:0,1:1:2.99:23,3,0	0/0:5,0:5:12.02:0,12,122	0/0:6,0:5:6.01:0,6,61	0/0:11,1:12:0.81:0,1,190	0/0:8,0:8:24.05:0,24,244
chr10	35892431	.	ATCTCTC	A	418.17	PASS	AB=0.958;AC=12;AF=0.300;AN=40;BaseQRankSum=3.873;DP=513;FS=28.085;HRun=0;HaplotypeScore=103.4352;InbreedingCoeff=0.4091;MQ=66.40;MQ0=12;MQRankSum=-2.666;QD=2.73;ReadPosRankSum=3.133;VQSLOD=0.2389;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:28:3.01:42,3,0	0/0:8,0:7:3.01:0,3,59	./.	./.	1/1:25,1:25:2.94:18,3,0	0/1:22,0:22:0:0,0,0	0/0:18,0:19:2.12:0,2,94	0/0:33,0:31:0.94:0,1,2	0/1:20,2:21:0.92:55,0,1	0/0:23,0:21:3.90:0,4,81	0/0:9,0:8:3.01:0,3,89	./.	./.	0/0:17,0:18:14.16:0,14,406	0/0:22,0:22:12.04:0,12,367	1/1:19,7:26:11.73:238,12,0	1/1:12,3:14:3.01:60,3,0	./.	0/0:16,0:16:0.94:0,1,2	0/0:14,0:14:0.47:0,0,1	0/0:29,0:29:6.02:0,6,175	0/0:14,0:14:3.01:0,3,43	./.	1/1:12,2:14:6.02:119,6,0	./.	0/0:17,0:17:0:0,0,0	0/0:15,0:15:3.01:0,3,64	./.
chr10	35892666	.	GT	G	4516.06	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=11.261;DP=729;FS=14.790;HRun=2;HaplotypeScore=71.6329;InbreedingCoeff=0.9927;MQ=78.93;MQ0=0;MQRankSum=-2.943;QD=34.47;ReadPosRankSum=2.007;VQSLOD=3.7689;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,58:58:99:1966,153,0	0/0:14,0:14:39.10:0,39,544	0/0:26,0:26:75.25:0,75,1099	0/0:17,0:17:14.51:0,15,461	0/0:26,0:26:72.19:0,72,1035	0/0:13,0:13:39.13:0,39,584	0/0:23,0:23:69.21:0,69,996	0/0:36,0:36:99:0,105,1570	0/0:34,0:34:99:0,102,1470	0/0:14,0:14:42.14:0,42,626	0/0:20,0:20:60.19:0,60,878	1/1:0,20:20:51.12:642,51,0	0/0:22,0:22:66.22:0,66,982	0/0:25,0:25:75.25:0,75,1124	0/0:36,0:36:99:0,105,1554	0/0:37,0:37:99:0,108,1590	0/0:27,0:27:81.27:0,81,1213	0/0:11,0:11:33.11:0,33,486	0/0:23,0:23:69.23:0,69,1030	0/0:24,0:24:72.22:0,72,1039	0/0:52,0:52:99:0,156,2211	0/0:21,0:21:63.21:0,63,944	1/1:0,23:23:63.20:817,63,0	1/1:0,30:30:84.27:1090,84,0	0/0:20,0:20:60.19:0,60,880	0/0:36,0:36:99:0,108,1617	0/0:35,0:35:99:0,105,1527	0/0:6,0:6:18.06:0,18,270
chr10	35892850	.	A	AGACTACT	16113.76	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-9.291;DP=675;FS=4.741;HRun=0;HaplotypeScore=154.3658;InbreedingCoeff=0.9992;MQ=84.13;MQ0=0;MQRankSum=-17.351;QD=89.03;ReadPosRankSum=1.518;VQSLOD=5.5172;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,10:22:33.11:1230,33,0	0/0:8,0:8:24.08:0,24,617	0/0:24,0:24:69.24:0,69,1729	0/0:26,0:26:56.24:0,56,1421	1/1:2,12:16:27.09:1069,27,0	0/0:27,0:27:81.28:0,81,2167	0/0:28,0:28:84.29:0,84,2235	0/0:23,0:23:57.18:0,57,1387	1/1:9,28:38:99:3987,102,0	0/0:26,0:26:78.27:0,78,2051	0/0:24,0:24:66.23:0,66,1775	1/1:5,16:21:57.20:2172,57,0	0/0:21,0:21:60.19:0,60,1559	0/0:20,0:20:60.19:0,60,1528	0/0:35,0:35:99:0,102,2678	1/1:6,22:30:78.27:3089,78,0	1/1:2,7:11:27.09:1071,27,0	0/0:20,0:20:43.88:0,44,1389	0/0:20,0:20:60.21:0,60,1563	0/0:39,0:39:99:0,114,2918	0/0:23,0:23:69.22:0,69,1700	0/0:35,0:35:99:0,102,2616	1/1:9,15:23:54.02:2064,54,0	1/1:2,16:18:36.59:1431,37,0	0/0:13,0:13:39.13:0,39,1024	0/0:38,0:38:99:0,111,2963	0/0:34,0:34:99:0,102,2653	0/0:10,0:10:30.09:0,30,750
chr10	35893599	.	TACACACAC	T	3653.47	PASS	AB=0.888;AC=42;AF=0.778;AN=54;BaseQRankSum=5.397;DP=575;FS=1.648;HRun=0;HaplotypeScore=155.0974;InbreedingCoeff=0.4235;MQ=53.03;MQ0=6;MQRankSum=-5.526;QD=8.72;ReadPosRankSum=1.528;VQSLOD=2.8648;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:43,0:46:2.39:238,2,0	1/1:2,0:4:6.02:111,6,0	./.	0/0:31,0:16:0.47:0,0,1	0/0:14,0:23:12.04:0,12,441	1/1:15,7:22:12.04:296,12,0	0/1:16,2:17:85.44:85,0,88	1/1:23,0:23:0.46:1,0,0	0/0:19,0:28:24.07:0,24,811	1/1:15,5:20:1.08:167,1,0	1/1:7,4:12:6.02:130,6,0	1/1:17,0:22:6.02:112,6,0	1/1:10,0:13:6.02:127,6,0	1/1:13,3:16:15.04:320,15,0	1/1:18,12:31:21.07:468,21,0	0/0:22,0:22:29.65:0,30,1102	0/0:16,0:27:30.10:0,30,955	0/1:12,1:13:99:143,0,109	1/1:10,0:10:2.98:21,3,0	1/1:17,2:22:17.93:327,18,0	1/1:24,0:24:5.99:94,6,0	1/1:16,6:22:3.01:74,3,0	1/1:8,0:10:6.01:77,6,0	1/1:17,0:25:2.50:15,3,0	1/1:10,6:16:12.04:298,12,0	1/1:18,3:21:7.98:144,8,0	1/1:16,6:22:15.05:330,15,0	1/1:4,1:4:3.01:75,3,0
chr10	35894214	.	TC	T	1564.41	PASS	AC=8;AF=0.154;AN=52;BaseQRankSum=5.817;DP=648;FS=13.236;HRun=2;HaplotypeScore=93.8612;InbreedingCoeff=0.9801;MQ=38.29;MQ0=149;MQRankSum=2.969;QD=18.62;ReadPosRankSum=2.346;VQSLOD=2.5938;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,26:27:57.14:707,57,0	0/0:9,0:9:27.09:0,27,404	./.	./.	0/0:24,0:20:29.80:0,30,447	0/0:17,0:13:30.10:0,30,449	0/0:23,0:15:39.09:0,39,559	0/0:26,0:21:63.21:0,63,943	0/0:32,0:28:75.25:0,75,1120	0/0:21,0:20:57.19:0,57,852	0/0:20,0:13:24.08:0,24,357	1/1:1,21:21:42.14:545,42,0	0/0:19,0:15:33.58:0,34,494	0/0:21,0:15:45.15:0,45,674	0/0:34,0:26:66.22:0,66,978	0/0:26,0:24:72.24:0,72,1078	0/0:36,0:25:60.19:0,60,872	0/0:27,0:17:45.12:0,45,650	0/0:56,0:11:30.10:0,30,434	0/0:21,0:20:54.18:0,54,800	0/0:49,0:37:96.28:0,96,1406	0/0:24,0:21:42.10:0,42,602	1/1:2,6:4:12.04:156,12,0	1/1:7,17:16:24.08:311,24,0	0/0:12,0:12:24.04:0,24,334	0/0:32,0:26:78.26:0,78,1168	0/0:26,0:24:63.21:0,63,942	0/0:9,0:4:12.04:0,12,180
chr10	35894370	.	AAATAAATC	A	6799.95	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-1.767;DP=493;FS=17.243;HRun=0;HaplotypeScore=123.9360;InbreedingCoeff=0.5436;MQ=48.94;MQ0=5;MQRankSum=-2.640;QD=15.35;ReadPosRankSum=3.678;VQSLOD=2.7904;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:23:26.53:203,27,0	1/1:4,3:7:6.02:150,6,0	0/0:29,0:19:13.26:0,13,260	0/0:21,0:7:9.03:0,9,220	1/1:10,13:23:18.56:241,19,0	1/1:9,7:15:5.88:36,6,0	1/1:6,5:11:11.87:184,12,0	1/1:30,0:27:6.02:127,6,0	1/1:13,3:16:5.95:93,6,0	1/1:14,9:23:24.03:543,24,0	1/1:9,12:21:23.81:365,24,0	1/1:13,0:13:8.93:83,9,0	1/1:8,3:11:6.02:148,6,0	1/1:8,8:16:17.95:338,18,0	1/1:7,7:14:14.95:264,15,0	1/1:9,12:21:17.93:336,18,0	1/1:8,8:16:12.04:300,12,0	1/1:8,2:9:6.02:128,6,0	1/1:7,5:10:15.01:320,15,0	1/1:14,14:28:35.92:568,36,0	1/1:11,4:15:2.78:20,3,0	1/1:8,4:12:8.95:164,9,0	1/1:21,0:21:18.85:189,19,0	1/1:10,0:10:6.02:82,6,0	1/1:7,16:23:35.88:664,36,0	1/1:14,14:26:33.04:716,33,0	1/1:9,6:15:14.97:314,15,0	1/1:3,4:7:9.03:225,9,0
chr10	35894406	.	AAATCAAT	A	4326.21	PASS	AB=1.000;AC=28;AF=0.500;AN=56;BaseQRankSum=10.929;DP=450;FS=18.407;HRun=0;HaplotypeScore=113.9311;InbreedingCoeff=-0.4509;MQ=56.32;MQ0=4;MQRankSum=-8.866;QD=11.38;ReadPosRankSum=7.706;VQSLOD=1.3607;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:1,27:27:27.09:500,27,0	0/1:7,0:7:67.32:80,0,67	0/0:26,0:17:40.24:0,40,480	0/0:17,0:12:27.51:0,28,357	0/1:23,0:23:99:113,0,254	0/0:12,0:11:17.20:0,17,129	0/1:10,0:10:71.68:72,0,108	0/1:23,0:23:62.69:63,0,363	0/1:12,0:12:14.92:15,0,224	0/1:20,0:20:99:282,0,205	0/1:17,0:17:99:141,0,186	1/1:2,10:12:9.03:187,9,0	0/1:14,0:14:63.45:63,0,190	0/1:16,0:16:99:149,0,195	0/1:19,0:19:95.91:96,0,271	0/1:14,0:14:50.69:167,0,51	0/1:16,0:15:99:160,0,135	0/1:7,0:6:78.05:78,0,92	0/1:12,0:11:99:161,0,115	0/1:28,0:28:99:308,0,316	0/0:15,0:15:23.22:0,23,199	0/1:9,0:9:72.80:73,0,100	1/1:1,17:18:24.98:497,25,0	1/1:0,13:13:6.02:116,6,0	0/1:20,0:20:74.97:329,0,75	0/1:22,0:21:99:394,0,171	0/1:14,0:14:99:155,0,142	0/1:6,0:6:39.89:128,0,40
chr10	35894552	.	AACAC	A	916	PASS	AB=0.889;AC=30;AF=0.625;AN=48;BaseQRankSum=-0.284;DP=457;FS=4.456;HRun=0;HaplotypeScore=80.4692;InbreedingCoeff=0.5063;MQ=65.10;MQ0=12;MQRankSum=0.853;QD=4.13;ReadPosRankSum=1.652;VQSLOD=0.9122;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:10.78:0,11,237	1/1:2,1:3:0.50:42,1,0	./.	./.	0/0:15,0:17:8.73:0,9,104	1/1:10,8:18:6.02:93,6,0	1/1:15,3:18:6.02:93,6,0	0/0:24,0:23:4.26:0,4,40	0/0:15,0:17:11.24:0,11,77	0/1:13,0:13:1.62:39,0,2	1/1:9,1:11:3:28,3,0	./.	1/1:7,3:10:6.07:134,6,0	1/1:5,0:6:6:53,6,0	1/1:9,5:14:5.98:92,6,0	0/0:13,0:18:13.74:0,14,114	0/0:19,0:23:10.98:0,11,49	1/1:14,0:13:6:57,6,0	./.	0/1:10,3:14:6.74:103,0,7	1/1:24,1:24:6.49:83,6,0	1/1:12,1:14:2.95:19,3,0	0/0:13,0:15:14.20:0,14,97	0/0:16,0:17:11.49:0,11,155	1/1:8,2:10:3.01:46,3,0	1/1:33,0:32:6.41:77,6,0	1/1:10,1:11:5.13:72,5,0	1/1:3,2:5:3.01:46,3,0
chr10	35894605	.	T	TA	2059.94	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-6.628;DP=527;FS=5.868;HRun=7;HaplotypeScore=70.2386;InbreedingCoeff=0.9923;MQ=65.53;MQ0=19;MQRankSum=-0.435;QD=24.82;ReadPosRankSum=1.201;VQSLOD=4.2916;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,28:31:78.24:942,78,0	0/0:6,0:6:18.03:0,18,174	0/0:24,0:13:36.05:0,36,343	0/0:26,0:11:26.98:0,27,243	0/0:21,0:21:45.02:0,45,425	0/0:16,0:16:36.04:0,36,343	0/0:19,0:19:39.06:0,39,376	0/0:28,0:27:72.08:0,72,678	0/0:18,0:17:39.04:0,39,370	0/0:19,0:19:45.05:0,45,424	0/0:19,0:18:45.06:0,45,434	1/1:1,13:13:27.08:326,27,0	0/0:19,0:19:45.95:0,46,436	0/0:17,0:15:35.97:0,36,335	0/0:37,0:36:89.64:0,90,868	0/0:22,0:22:41.57:0,42,405	0/0:17,0:17:48.01:0,48,452	0/0:12,0:12:29.96:0,30,271	0/0:18,0:17:42.06:0,42,400	0/0:15,0:15:45.06:0,45,429	0/0:19,0:19:47.99:0,48,446	0/0:16,0:16:39.04:0,39,370	1/1:6,11:15:36.58:436,37,0	1/1:5,16:21:45.20:517,45,0	0/0:12,0:12:33.05:0,33,318	0/0:21,0:17:45.02:0,45,421	0/0:16,0:16:45.07:0,45,434	0/0:7,0:7:15.02:0,15,145
chr10	35895390	.	TA	T	3041.88	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=4.511;DP=646;FS=1.356;HRun=4;HaplotypeScore=74.1792;InbreedingCoeff=0.9997;MQ=84.67;MQ0=0;MQRankSum=-1.587;QD=31.04;ReadPosRankSum=2.510;VQSLOD=4.2228;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,41:44:99:1403,117,0	0/0:12,0:12:36.11:0,36,488	0/0:25,0:25:39.57:0,40,776	0/0:18,0:18:51.16:0,51,687	0/0:28,0:27:81.27:0,81,1134	0/0:23,0:23:66.16:0,66,884	0/0:26,0:26:75.24:0,75,1032	0/0:29,0:29:81.24:0,81,1100	0/0:22,0:22:63.21:0,63,882	0/0:26,0:26:75.19:0,75,1011	0/0:27,0:27:78.26:0,78,1092	1/1:1,14:15:39.12:468,39,0	0/0:23,0:23:69.23:0,69,961	0/0:22,0:22:66.19:0,66,903	0/0:23,0:23:66.22:0,66,924	0/0:27,0:27:81.27:0,81,1133	0/0:32,0:32:96.30:0,96,1324	0/0:15,0:15:39.13:0,39,540	0/0:22,0:22:63.20:0,63,867	0/0:20,0:20:54.18:0,54,756	0/0:28,0:28:81.27:0,81,1134	0/0:25,0:25:75.24:0,75,1025	1/1:1,27:28:81.25:972,81,0	1/1:0,11:11:30.09:360,30,0	0/0:24,0:24:69.23:0,69,965	0/0:17,0:17:48.16:0,48,672	0/0:23,0:23:66.22:0,66,923	0/0:11,0:11:33.11:0,33,462
chr10	35895504	.	T	TC	380.35	PASS	AB=0.725;AC=2;AF=0.036;AN=56;BaseQRankSum=3.398;DP=524;FS=3.539;HRun=1;HaplotypeScore=77.6691;InbreedingCoeff=-0.0553;MQ=62.72;MQ0=39;MQRankSum=-0.744;QD=7.92;ReadPosRankSum=-0.769;VQSLOD=0.5821;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:29,11:33:99:401,0,99	0/0:5,0:5:8.99:0,9,86	0/0:33,0:13:33.08:0,33,388	0/0:50,0:19:44.07:0,44,484	0/0:22,0:21:51.04:0,51,613	0/0:24,0:24:52.02:0,52,570	0/0:17,0:17:39.10:0,39,477	0/0:26,0:23:65.03:0,65,746	0/0:13,0:13:32.63:0,33,341	0/0:23,0:22:61.75:0,62,684	0/0:8,0:8:8.62:0,9,87	0/1:4,4:7:64.46:68,0,64	0/0:18,0:17:30.42:0,30,368	0/0:12,0:12:28.88:0,29,331	0/0:9,0:9:18:0,18,197	0/0:10,0:10:27.09:0,27,344	0/0:27,0:27:62.28:0,62,706	0/0:17,0:17:42.87:0,43,473	0/0:19,0:18:49.39:0,49,603	0/0:14,0:14:34.85:0,35,384	0/0:22,0:18:26.31:0,26,283	0/0:14,0:14:29.76:0,30,355	0/0:6,11:14:2.93:0,3,38	0/0:7,4:9:2.89:0,3,38	0/0:15,0:14:27.99:0,28,378	0/0:19,0:19:53.30:0,53,617	0/0:21,0:20:54.11:0,54,641	0/0:10,0:10:24.08:0,24,305
chr10	35895861	.	GT	G	22456.78	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=5.192;DP=670;FS=8.246;HRun=2;HaplotypeScore=121.9494;InbreedingCoeff=0.9994;MQ=91.86;MQ0=1;MQRankSum=-11.954;QD=36.52;ReadPosRankSum=7.374;VQSLOD=3.1960;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:0,36:36:99:1323,102,0	1/1:0,10:10:30.10:390,30,0	0/0:26,0:26:75.25:0,75,1097	0/0:29,0:29:69.14:0,69,1142	1/1:0,17:17:51.17:662,51,0	1/1:0,25:25:69.22:896,69,0	1/1:1,22:22:66.21:857,66,0	1/1:0,14:14:39.13:506,39,0	1/1:0,24:24:63.20:818,63,0	1/1:0,29:29:87.28:1129,87,0	1/1:0,12:12:30.10:389,30,0	1/1:0,26:26:75.24:973,75,0	1/1:1,24:25:60.20:779,60,0	1/1:0,25:25:69.22:896,69,0	1/1:0,41:41:99:1402,108,0	1/1:1,27:28:78.25:1013,78,0	1/1:1,25:26:69.22:896,69,0	1/1:0,19:19:54.18:701,54,0	1/1:0,19:19:57.17:726,57,0	1/1:0,23:23:69.22:896,69,0	1/1:0,29:29:81.26:1052,81,0	1/1:1,24:25:72.23:933,72,0	1/1:0,22:22:60.20:779,60,0	1/1:0,18:18:48.16:623,48,0	1/1:0,20:20:60.20:779,60,0	1/1:0,34:34:99:1325,102,0	1/1:1,32:33:96.31:1246,96,0	1/1:0,12:12:36.12:467,36,0
chr10	35896168	.	T	TGGGGG	5628.20	PASS	AB=0.963;AC=7;AF=0.125;AN=56;BaseQRankSum=11.470;DP=780;FS=1.945;HRun=5;HaplotypeScore=145.9670;InbreedingCoeff=0.8341;MQ=83.57;MQ0=0;MQRankSum=-5.426;QD=45.39;ReadPosRankSum=1.536;VQSLOD=1.6588;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:45,1:46:72.35:2095,72,0	0/0:13,0:13:36.12:0,36,653	0/0:31,0:31:86.55:0,87,1411	0/0:17,0:17:45.14:0,45,801	0/0:18,0:18:45.15:0,45,834	0/0:28,0:28:81.27:0,81,1489	0/0:32,0:32:87.29:0,87,1592	0/0:25,0:25:69.19:0,69,1188	0/0:25,0:25:69.23:0,69,1292	0/0:22,0:22:48.14:0,48,894	0/0:25,0:25:66.20:0,66,1196	1/1:36,2:38:74.35:2085,74,0	0/0:27,0:27:72.20:0,72,1261	0/0:34,0:34:90.24:0,90,1595	0/0:23,0:23:48.13:0,48,898	0/0:29,0:29:78.26:0,78,1447	0/0:44,0:44:99:0,123,2238	0/0:31,0:31:81.27:0,81,1487	0/0:16,0:16:45.08:0,45,801	0/0:26,0:26:63.19:0,63,1161	0/0:91,0:91:99:0,256,4572	0/0:18,0:18:54.18:0,54,973	1/1:14,0:14:27.09:585,27,0	0/1:25,1:26:88.10:863,0,88	0/0:22,0:22:51.16:0,51,944	0/0:31,0:31:81.25:0,81,1456	0/0:22,0:22:60.17:0,60,1075	0/0:6,0:6:18.06:0,18,337
chr10	35896169	.	G	GGGGGT	7996.13	PASS	AB=0.565;AC=7;AF=0.125;AN=56;BaseQRankSum=-5.541;DP=791;FS=0.000;HRun=0;HaplotypeScore=143.2392;InbreedingCoeff=0.8341;MQ=84.45;MQ0=0;MQRankSum=-7.340;QD=60.12;ReadPosRankSum=0.631;VQSLOD=5.4285;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:16,35:53:99:3219,111,0	0/0:14,0:14:36.12:0,36,727	0/0:32,0:32:84.24:0,84,1430	0/0:19,0:19:45.14:0,45,829	0/0:18,0:18:45.15:0,45,846	0/0:28,0:28:81.20:0,81,1553	0/0:32,0:32:87.23:0,87,1719	0/0:25,0:25:63.16:0,63,1216	0/0:24,0:24:72.24:0,72,1426	0/0:22,0:22:48.16:0,48,936	0/0:25,0:25:66.21:0,66,1283	1/1:9,30:39:96.33:2850,96,0	0/0:28,0:28:72.10:0,72,1359	0/0:33,0:33:84.27:0,84,1657	0/0:21,0:21:48.16:0,48,974	0/0:29,0:29:81.23:0,81,1567	0/0:44,0:44:99:0,117,2374	0/0:31,0:31:81.24:0,81,1602	0/0:17,0:17:45.13:0,45,869	0/0:26,0:26:66.18:0,66,1230	0/0:92,0:92:99:0,253,4807	0/0:18,0:18:53.84:0,54,1010	1/1:4,10:15:27.09:793,27,0	0/1:6,20:26:76.56:1134,0,77	0/0:21,0:21:51.18:0,51,1034	0/0:31,0:31:78.25:0,78,1502	0/0:22,0:22:63.19:0,63,1206	0/0:6,0:6:18.06:0,18,326
chr10	35896481	.	C	CA	12644.51	PASS	AB=0.968;AC=54;AF=0.964;AN=56;BaseQRankSum=-4.905;DP=554;FS=7.554;HRun=7;HaplotypeScore=84.2659;InbreedingCoeff=0.1687;MQ=76.20;MQ0=5;MQRankSum=-5.012;QD=22.82;ReadPosRankSum=4.355;VQSLOD=4.6811;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:9,0:36:85.49:603,85,0	1/1:1,3:4:12.04:145,12,0	0/1:40,1:23:12.36:12,0,159	0/1:43,0:23:5.37:5,0,265	1/1:3,19:22:48.15:579,48,0	1/1:2,19:21:54.17:652,54,0	1/1:4,16:20:42.13:507,42,0	1/1:4,17:21:54.10:606,54,0	1/1:1,12:13:36.11:432,36,0	1/1:3,13:16:39.12:467,39,0	1/1:5,11:16:33.10:393,33,0	1/1:2,0:13:35.64:297,36,0	1/1:0,21:21:60.18:725,60,0	1/1:1,20:21:51.16:616,51,0	1/1:2,12:14:30.09:362,30,0	1/1:3,22:25:69.21:833,69,0	1/1:3,23:25:69.21:825,69,0	1/1:4,20:23:54.17:652,54,0	1/1:2,12:14:36.10:426,36,0	1/1:1,12:13:33.10:399,33,0	1/1:3,24:27:63.19:761,63,0	1/1:4,11:15:33.03:368,33,0	1/1:0,0:8:23.74:208,24,0	1/1:6,0:15:26.76:214,27,0	1/1:1,9:10:24.07:290,24,0	1/1:5,21:26:63.19:759,63,0	1/1:5,16:21:39.12:471,39,0	1/1:2,1:3:3.01:36,3,0
chr10	35896491	.	AT	A	1781.79	PASS	AB=0.965;AC=9;AF=0.161;AN=56;BaseQRankSum=9.387;DP=551;FS=3.000;HRun=1;HaplotypeScore=118.9270;InbreedingCoeff=0.8264;MQ=71.37;MQ0=11;MQRankSum=-5.139;QD=14.97;ReadPosRankSum=0.093;VQSLOD=3.4863;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,24:31:89.86:1004,90,0	0/0:5,0:5:15.05:0,15,220	0/0:55,2:22:47.12:0,47,472	0/1:52,2:22:15.71:16,0,186	0/0:23,0:23:60.15:0,60,851	0/0:21,0:21:59.95:0,60,821	0/0:19,0:19:54.14:0,54,780	0/0:26,0:26:72.21:0,72,1049	0/0:15,0:15:45.13:0,45,645	0/0:15,0:15:45.14:0,45,644	0/0:14,0:14:39.09:0,39,516	1/1:1,11:12:33.10:391,33,0	0/0:24,0:24:66.14:0,66,896	0/0:19,0:19:50.95:0,51,734	0/0:13,0:13:33.11:0,33,503	0/0:24,0:24:72.22:0,72,1054	0/0:24,0:23:69.14:0,69,980	0/0:20,0:20:54.14:0,54,802	0/0:13,0:13:39.09:0,39,531	0/0:11,0:11:33.09:0,33,469	0/0:22,0:22:63.21:0,63,992	0/0:12,0:12:33.11:0,33,482	1/1:0,8:8:20.92:215,21,0	1/1:2,11:12:29.85:321,30,0	0/0:11,0:11:30.03:0,30,443	0/0:24,1:25:34.42:0,34,1069	0/0:18,0:18:48:0,48,674	0/0:1,0:1:3.01:0,3,48
chr10	35896518	.	C	CA	2055.13	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=-1.516;DP=538;FS=0.000;HRun=8;HaplotypeScore=95.7903;InbreedingCoeff=0.8142;MQ=66.57;MQ0=11;MQRankSum=-4.136;QD=14.08;ReadPosRankSum=0.351;VQSLOD=3.5009;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:34:32.90:0,33,103	0/0:6,0:6:18.01:0,18,164	0/0:64,0:26:20.97:0,21,289	0/1:54,0:15:6.64:7,0,68	1/1:1,21:22:47.92:502,48,0	0/0:17,0:17:44.99:0,45,402	0/0:18,0:18:38.99:0,39,352	0/0:28,0:28:63.01:0,63,572	1/1:2,14:16:39.12:450,39,0	0/0:16,0:16:39:0,39,353	0/0:14,0:14:33.01:0,33,301	0/0:1,0:11:21.92:0,22,74	0/0:18,0:19:53.07:0,53,473	0/0:14,0:14:4.53:0,5,222	0/0:14,0:14:29.94:0,30,259	1/1:4,23:27:57.17:658,57,0	1/1:7,19:26:54.13:601,54,0	0/0:14,0:14:36.02:0,36,330	0/0:11,0:11:20.27:0,20,259	0/0:7,0:7:18.01:0,18,165	0/0:22,0:22:51.01:0,51,466	0/0:9,0:9:24.01:0,24,220	0/0:1,0:5:6.11:0,6,18	0/0:1,0:16:18.33:0,18,54	0/0:14,0:14:33.02:0,33,302	0/0:19,0:20:44.05:0,44,390	0/0:16,0:16:45.02:0,45,411	0/0:3,0:3:9:0,9,82
chr10	35897163	.	AT	A	3557.53	PASS	AB=0.609;AC=15;AF=0.268;AN=56;BaseQRankSum=-14.913;DP=622;FS=1.147;HRun=11;HaplotypeScore=134.0476;InbreedingCoeff=0.8962;MQ=68.23;MQ0=1;MQRankSum=-0.798;QD=18.63;ReadPosRankSum=3.512;VQSLOD=2.7280;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,33:38:83.88:689,84,0	0/0:11,0:11:17.63:0,18,123	0/0:16,1:16:9.51:0,10,256	0/0:5,0:5:5.14:0,5,56	1/1:3,29:32:80.82:660,81,0	0/0:21,0:21:41.53:0,42,231	0/0:21,0:21:55.45:0,55,336	0/0:32,0:32:76.47:0,76,503	0/1:5,9:14:4.71:170,0,5	0/0:25,0:25:57.46:0,57,334	0/0:23,0:23:63.96:0,64,371	1/1:3,17:20:44.93:369,45,0	0/0:16,0:16:29.19:0,29,182	0/0:29,0:29:78.29:0,78,461	0/0:29,0:29:78.37:0,78,505	1/1:3,11:15:32:252,32,0	1/1:4,21:25:30.93:461,31,0	0/0:21,1:22:33.60:0,34,289	0/0:26,0:25:54.76:0,55,330	0/0:25,0:25:64.03:0,64,394	0/0:15,0:15:23.35:0,23,137	0/0:18,0:19:52.12:0,52,292	1/1:2,23:25:62.91:517,63,0	1/1:1,19:22:55.85:439,56,0	0/0:22,0:22:46.66:0,47,290	0/0:29,0:29:61.90:0,62,353	0/0:37,0:37:75.26:0,75,428	0/0:6,0:6:11.63:0,12,76
chr10	35897174	.	T	TC	11336.17	PASS	AB=0.786;AC=36;AF=0.643;AN=56;BaseQRankSum=-12.633;DP=630;FS=1.436;HRun=1;HaplotypeScore=115.9126;InbreedingCoeff=0.8821;MQ=66.31;MQ0=1;MQRankSum=-0.959;QD=27.12;ReadPosRankSum=-0.182;VQSLOD=4.6105;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:90.87:0,91,552	1/1:10,1:11:11.95:131,12,0	0/0:23,0:19:10.47:0,10,318	0/1:7,0:7:0.16:0,0,88	0/0:35,0:35:93.42:0,93,582	1/1:1,21:23:42.11:519,42,0	1/1:3,19:22:43.13:601,43,0	1/1:3,28:31:86.49:965,86,0	0/0:10,0:10:26.41:0,26,175	1/1:11,14:26:55.72:728,56,0	1/1:1,22:24:69.06:819,69,0	0/0:18,0:18:46.84:0,47,280	1/1:2,12:14:27.02:341,27,0	1/1:6,22:29:79.08:936,79,0	1/1:10,20:30:68.82:855,69,0	0/0:16,0:16:38.17:0,38,241	0/0:25,0:25:70.49:0,70,456	1/1:1,22:23:42.90:704,43,0	1/1:5,23:27:70.11:746,70,0	1/1:4,21:26:22.66:674,23,0	1/1:0,13:13:24.08:301,24,0	1/1:2,21:23:56.89:677,57,0	0/0:27,0:27:70.39:0,70,436	0/0:22,0:22:58.54:0,59,349	1/1:1,17:18:23.90:515,24,0	1/1:3,26:29:61.75:846,62,0	1/1:5,29:37:69.08:871,69,0	0/1:1,3:4:7.80:107,0,8
chr10	35897176	.	A	AG	11253.25	PASS	AB=1.000;AC=35;AF=0.625;AN=56;BaseQRankSum=-11.967;DP=623;FS=4.787;HRun=1;HaplotypeScore=112.8806;InbreedingCoeff=0.8685;MQ=66.96;MQ0=1;MQRankSum=0.409;QD=27.65;ReadPosRankSum=-0.160;VQSLOD=4.4837;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:61.79:0,62,374	1/1:1,10:11:14.84:170,15,0	0/0:23,0:20:23.04:0,23,402	0/0:8,0:7:0.98:0,1,137	0/0:35,0:35:99:0,105,1319	1/1:22,0:22:42.12:520,42,0	1/1:22,0:22:46.62:631,47,0	1/1:33,0:33:72.60:987,73,0	0/0:9,0:9:27.09:0,27,350	1/1:27,0:27:61.80:715,62,0	1/1:26,0:26:71.79:796,72,0	0/0:17,0:17:44:0,44,228	1/1:13,0:13:26.02:343,26,0	1/1:27,0:27:77.54:925,78,0	1/1:30,0:30:70.92:828,71,0	0/0:15,0:15:45.15:0,45,584	0/0:25,0:25:72.23:0,72,934	1/1:24,0:24:2.35:670,2,0	1/1:26,0:25:67.67:689,68,0	1/1:26,0:26:26.78:648,27,0	1/1:15,0:15:27.07:336,27,0	1/1:23,0:23:53.97:647,54,0	0/0:28,0:28:68.57:0,69,380	0/0:21,0:21:54.06:0,54,270	1/1:18,0:18:45.12:550,45,0	1/1:28,0:28:75.70:845,76,0	1/1:32,0:32:54.75:865,55,0	0/1:4,0:4:7.96:89,0,8
chr10	35897877	.	TCAG	T	161.53	PASS	AB=0.842;AC=2;AF=0.036;AN=56;BaseQRankSum=5.117;DP=360;FS=14.765;HRun=0;HaplotypeScore=96.0728;InbreedingCoeff=-0.0475;MQ=70.47;MQ0=0;MQRankSum=-3.124;QD=5.05;ReadPosRankSum=0.113;VQSLOD=1.1894;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:24.08:0,24,425	0/0:4,0:4:12.04:0,12,213	0/0:19,0:16:38.14:0,38,793	0/0:12,0:8:6.47:0,6,303	0/0:19,0:19:54.17:0,54,1246	0/0:11,0:12:29.45:0,29,597	0/0:4,0:4:12.04:0,12,219	0/1:12,6:18:99:236,0,447	0/0:7,0:7:18.06:0,18,415	0/0:19,0:20:17.09:0,17,399	0/0:17,0:17:15.05:0,15,236	0/0:11,0:11:30.10:0,30,548	0/0:11,0:11:33.10:0,33,590	0/0:6,0:6:15.05:0,15,265	0/0:13,0:14:32.46:0,32,653	0/0:9,0:9:24.08:0,24,572	0/0:26,0:26:72.25:0,72,1734	0/0:4,0:4:9.03:0,9,155	0/1:13,1:14:3.37:3,0,555	0/0:21,0:21:21.02:0,21,297	0/0:6,0:6:18.06:0,18,311	0/0:8,0:8:9.03:0,9,133	0/0:13,0:13:39.12:0,39,708	0/0:6,0:6:12.04:0,12,190	0/0:13,0:13:39.12:0,39,650	0/0:19,0:20:29.13:0,29,654	0/0:24,0:23:15:0,15,224	0/0:8,0:8:9:0,9,95
chr10	35897881	.	T	TTG	1394.01	PASS	AB=1.000;AC=32;AF=0.571;AN=56;BaseQRankSum=7.732;DP=333;FS=28.614;HRun=0;HaplotypeScore=79.6938;InbreedingCoeff=0.4828;MQ=69.00;MQ0=0;MQRankSum=-7.111;QD=6.37;ReadPosRankSum=1.122;VQSLOD=1.0980;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:11,0:11:0.92:1,0,176	1/1:4,0:4:11.53:60,12,0	0/0:17,0:14:36.06:0,36,468	0/0:12,0:8:21.50:0,22,247	0/0:17,0:17:44.94:0,45,652	0/1:11,0:11:25.05:108,0,25	1/1:4,0:4:11.46:61,11,0	1/1:15,0:15:30.69:207,31,0	0/0:7,0:7:4.13:0,4,214	1/1:20,0:19:6.37:103,6,0	0/1:16,0:16:4.04:4,0,15	0/0:10,0:10:2.08:0,2,199	1/1:10,0:10:21.45:138,21,0	1/1:6,0:6:11.27:54,11,0	1/1:14,0:14:18.98:159,19,0	0/0:9,0:9:24.08:0,24,367	0/0:25,0:25:69.23:0,69,1054	0/1:4,0:4:7.82:8,0,36	1/1:11,0:11:32.11:187,32,0	1/1:18,0:18:4.55:29,5,0	0/1:6,0:6:9.57:29,0,10	1/1:8,0:8:5.94:42,6,0	0/0:12,0:12:36.04:0,36,348	0/0:5,0:5:7.23:0,7,54	1/1:12,0:12:26.18:148,26,0	0/1:20,0:20:38.20:140,0,38	1/1:23,0:21:8.60:64,9,0	1/1:0,6:6:3.01:44,3,0
chr10	35897884	.	T	TGG	3456.64	PASS	AB=1.000;AC=37;AF=0.661;AN=56;BaseQRankSum=3.634;DP=313;FS=30.953;HRun=3;HaplotypeScore=69.1771;InbreedingCoeff=0.6601;MQ=63.95;MQ0=0;MQRankSum=-5.751;QD=16.94;ReadPosRankSum=0.848;VQSLOD=-0.4264;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:21.07:0,21,257	1/1:4,0:4:12.04:145,12,0	0/0:14,0:11:23.94:0,24,282	0/0:11,0:7:18.11:0,18,196	0/0:16,0:16:41.12:0,41,382	1/1:11,0:11:6.56:282,7,0	1/1:4,0:4:12.04:144,12,0	1/1:6,7:13:33.53:349,34,0	0/1:7,0:7:18.76:19,0,126	1/1:2,18:19:1.24:244,1,0	1/1:2,12:15:1.32:25,1,0	0/0:8,0:8:24.07:0,24,287	1/1:10,0:10:30.03:351,30,0	1/1:5,0:5:12.04:142,12,0	1/1:14,0:14:18.48:425,18,0	0/0:9,0:9:27.09:0,27,370	0/0:25,0:25:65.90:0,66,583	1/1:4,0:4:3.01:40,3,0	1/1:1,10:11:33.09:407,33,0	1/1:2,14:16:2.99:24,3,0	1/1:5,0:5:9.03:104,9,0	1/1:1,5:7:3.01:37,3,0	0/0:12,0:12:36.11:0,36,442	0/0:4,0:4:6.02:0,6,76	1/1:11,0:11:19.98:325,20,0	1/1:4,16:20:4.05:322,4,0	1/1:2,19:19:2.41:35,2,0	1/1:6,0:6:3.01:36,3,0
chr10	35897887	.	G	GT	1046.49	PASS	AB=1.000;AC=24;AF=0.545;AN=44;BaseQRankSum=-1.697;DP=298;FS=4.152;HRun=10;HaplotypeScore=67.4849;InbreedingCoeff=0.4832;MQ=64.81;MQ0=2;MQRankSum=-2.172;QD=4.82;ReadPosRankSum=1.353;VQSLOD=1.0335;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:10,0:10:0:0,0,0	0/1:4,0:4:0:0,0,0	0/0:14,0:11:6.01:0,6,72	0/0:10,1:7:5.56:0,6,35	1/1:3,12:15:10.67:302,11,0	0/1:9,0:9:0:0,0,0	0/1:4,0:4:0:0,0,0	1/1:13,0:13:15.83:67,16,0	1/1:2,4:6:12.03:128,12,0	0/1:20,0:19:0.12:0,0,0	./.	0/1:8,0:8:0:0,0,0	0/1:10,0:10:0:0,0,0	0/1:5,0:5:0:0,0,0	0/1:14,0:14:0:0,0,0	0/0:9,0:9:23.96:0,24,197	1/1:1,24:25:41.50:634,41,0	./.	1/1:12,0:11:2.88:15,3,0	./.	0/1:4,0:4:0:0,0,0	./.	0/1:12,0:12:0:0,0,0	./.	0/1:9,0:9:0:0,0,0	0/1:17,0:17:0:0,0,0	0/1:20,0:19:0:0,0,0	./.
chr10	35898083	.	T	TTTG	2891.77	PASS	AB=0.816;AC=17;AF=0.304;AN=56;BaseQRankSum=8.757;DP=275;FS=12.481;HRun=0;HaplotypeScore=186.7692;InbreedingCoeff=-0.2208;MQ=54.41;MQ0=4;MQRankSum=-1.423;QD=19.41;ReadPosRankSum=-4.883;VQSLOD=1.3867;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:7:18.06:0,18,267	0/0:2,0:2:6.02:0,6,78	0/0:21,0:12:5.74:0,6,301	0/0:19,0:7:18.02:0,18,221	0/0:9,0:9:21.03:0,21,350	0/1:9,4:13:99:290,0,125	0/1:7,1:8:36.95:144,0,37	0/1:6,0:6:66.65:67,0,76	0/0:9,0:9:21.06:0,21,322	0/1:12,9:21:99:613,0,119	0/1:7,4:11:63.06:238,0,63	0/0:12,0:12:20.77:0,21,402	0/1:7,1:8:91.65:97,0,92	0/1:9,3:12:81.47:147,0,81	0/1:8,5:13:94.87:348,0,95	0/0:11,0:11:30.10:0,30,499	0/0:14,0:14:39.13:0,39,629	0/0:3,1:3:5.69:0,6,51	0/1:8,0:8:17.24:17,0,148	0/0:8,0:8:18.51:0,19,208	1/1:2,1:2:3.01:69,3,0	0/1:7,4:11:86.02:278,0,86	0/0:4,0:4:11.95:0,12,124	0/0:6,0:5:7.15:0,7,137	0/1:8,1:9:99:106,0,162	0/1:7,4:11:84.02:252,0,84	0/1:9,5:14:99:314,0,107	1/1:0,1:1:3.01:69,3,0
chr10	35898098	.	GC	G	2077.89	PASS	AB=0.837;AC=34;AF=0.607;AN=56;BaseQRankSum=-4.848;DP=252;FS=5.581;HRun=1;HaplotypeScore=183.5806;InbreedingCoeff=0.3636;MQ=46.11;MQ0=1;MQRankSum=0.046;QD=11.29;ReadPosRankSum=3.159;VQSLOD=2.2781;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:7,0:7:1.86:10,0,2	1/1:0,2:2:6.02:79,6,0	0/1:7,1:6:7.74:8,0,24	0/0:15,0:6:16.64:0,17,147	0/0:10,0:10:26.46:0,26,187	1/1:7,5:12:7.60:163,8,0	0/1:6,3:9:17.27:80,0,17	1/1:3,2:5:4:77,4,0	0/0:10,0:10:29.94:0,30,241	1/1:13,6:19:6.07:142,6,0	0/1:7,4:11:4.29:116,0,4	0/1:10,0:13:19.01:26,0,19	1/1:3,5:8:10.21:163,10,0	1/1:6,6:12:2.59:160,3,0	1/1:6,6:12:2.96:107,3,0	0/0:10,0:10:28.92:0,29,222	0/0:16,0:16:27.29:0,27,259	1/1:1,3:3:7.57:87,8,0	1/1:1,4:5:11.36:161,11,0	1/1:0,8:8:11.95:232,12,0	0/0:2,0:2:1.77:0,2,4	1/1:7,4:11:1.06:109,1,0	0/0:2,0:4:0.24:0,0,4	1/1:5,0:5:5.02:14,5,0	1/1:3,6:9:12.69:197,13,0	1/1:6,5:11:13.32:156,13,0	0/1:6,6:13:0.80:158,0,1	0/0:1,0:1:0.47:0,0,1
chr10	35898102	.	TGA	T	4396.18	PASS	AB=0.881;AC=42;AF=0.750;AN=56;BaseQRankSum=5.046;DP=246;FS=11.575;HRun=0;HaplotypeScore=180.4846;InbreedingCoeff=0.6237;MQ=46.54;MQ0=1;MQRankSum=-1.006;QD=24.02;ReadPosRankSum=4.704;VQSLOD=4.7274;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:4,1:6:0.56:28,0,1	1/1:2,0:2:6.02:76,6,0	0/1:9,0:7:5.51:6,0,66	0/0:14,0:6:11.89:0,12,148	0/0:12,0:12:29.85:0,30,355	1/1:4,7:12:36.08:390,36,0	1/1:2,5:8:24.02:237,24,0	1/1:1,2:4:10.56:90,11,0	0/0:10,0:10:30.10:0,30,387	1/1:4,12:19:52.66:581,53,0	1/1:5,5:11:26.68:263,27,0	0/1:12,0:12:4.59:62,0,5	1/1:4,2:8:20.12:179,20,0	1/1:4,5:11:30.02:307,30,0	1/1:4,6:11:27.04:273,27,0	0/0:11,0:11:32.46:0,32,380	0/0:16,0:16:44.93:0,45,475	0/1:2,1:3:0.49:40,0,0	1/1:4,1:5:15.05:178,15,0	1/1:6,0:8:23.09:263,23,0	1/1:0,2:2:6.01:61,6,0	1/1:3,7:11:32.94:324,33,0	1/1:3,0:3:2.11:17,2,0	1/1:3,0:4:8.56:55,9,0	1/1:5,3:9:27.05:302,27,0	1/1:5,4:10:25.40:247,25,0	1/1:6,5:13:38.80:386,39,0	1/1:0,1:1:3.01:32,3,0
chr10	35898103	.	GA	G	1853.29	PASS	AB=0.952;AC=41;AF=0.732;AN=56;BaseQRankSum=4.399;DP=245;FS=8.622;HRun=1;HaplotypeScore=186.7351;InbreedingCoeff=0.5971;MQ=46.64;MQ0=1;MQRankSum=-1.275;QD=10.65;ReadPosRankSum=3.838;VQSLOD=1.5552;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:6,0:6:1.04:10,0,1	1/1:0,2:2:6.02:67,6,0	0/0:8,0:6:4.43:0,4,35	0/0:14,1:7:0.62:0,1,64	0/0:12,0:12:29.57:0,30,238	1/1:8,4:12:26.92:175,27,0	1/1:6,2:8:8.22:75,8,0	1/1:4,0:4:8.03:25,8,0	0/0:10,0:10:29.97:0,30,251	1/1:16,3:19:39.69:174,40,0	1/1:8,3:11:12.31:115,12,0	0/1:7,2:12:23.71:29,0,24	1/1:6,2:8:12.25:90,12,0	1/1:7,4:11:20.09:154,20,0	1/1:8,3:11:18.69:98,19,0	0/0:11,0:11:25:0,25,236	0/0:15,0:15:43.77:0,44,314	1/1:3,1:3:3.02:37,3,0	1/1:1,4:5:14.26:149,14,0	1/1:2,6:8:8.74:188,9,0	1/1:2,0:2:4.07:11,4,0	1/1:8,3:11:20.86:129,21,0	0/1:1,0:3:1.93:2,0,3	1/1:3,1:4:5.28:15,5,0	1/1:4,5:9:20.60:178,21,0	1/1:7,3:10:20.88:116,21,0	1/1:9,4:13:27.73:183,28,0	1/1:1,0:1:2.04:6,2,0
chr10	35898106	.	TGA	T	4340.57	PASS	AB=0.941;AC=40;AF=0.714;AN=56;BaseQRankSum=4.069;DP=252;FS=9.886;HRun=0;HaplotypeScore=187.0434;InbreedingCoeff=0.5589;MQ=40.40;MQ0=1;MQRankSum=-1.515;QD=23.09;ReadPosRankSum=4.583;VQSLOD=4.5465;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:6,1:7:12.67:13,0,22	1/1:2,0:2:6.02:76,6,0	0/0:5,0:4:3.88:0,4,40	0/1:15,0:6:30.81:34,0,31	0/0:13,0:13:35.86:0,36,419	1/1:12,0:12:36.07:389,36,0	1/1:8,0:8:24.02:241,24,0	1/1:3,0:3:8.99:82,9,0	0/0:11,0:11:33.10:0,33,427	1/1:19,0:19:54.01:578,54,0	1/1:10,1:11:29.54:266,30,0	0/1:14,2:16:45.63:46,0,107	1/1:7,0:7:16.46:170,16,0	1/1:11,0:11:29.96:319,30,0	1/1:11,0:11:19.82:265,20,0	0/0:11,0:11:32.13:0,32,394	0/0:19,0:19:37.02:0,37,546	0/1:4,0:3:2.75:32,0,3	1/1:5,0:5:15.05:180,15,0	1/1:8,0:8:22.61:271,23,0	1/1:2,0:2:6.01:61,6,0	1/1:11,0:11:32.91:329,33,0	0/0:5,0:5:10.12:0,10,65	1/1:3,1:4:5.42:39,5,0	1/1:9,0:9:27.06:312,27,0	1/1:9,0:9:21.52:229,22,0	1/1:13,0:13:38.63:379,39,0	1/1:1,0:1:3.01:32,3,0
chr10	35898107	.	G	GT	3085.03	PASS	AB=0.877;AC=34;AF=0.607;AN=56;BaseQRankSum=9.698;DP=251;FS=0.646;HRun=2;HaplotypeScore=187.0482;InbreedingCoeff=0.3906;MQ=40.45;MQ0=1;MQRankSum=-0.176;QD=17.94;ReadPosRankSum=2.220;VQSLOD=3.6870;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:4,3:7:3.86:115,0,4	0/0:2,0:2:3.63:0,4,10	0/0:5,0:5:10.10:0,10,50	0/0:14,0:5:3.44:0,3,12	0/0:12,0:12:32.89:0,33,257	1/1:12,0:12:11.91:256,12,0	1/1:8,0:8:7.90:149,8,0	1/1:3,0:3:9.03:104,9,0	0/0:11,0:11:32.92:0,33,262	1/1:19,0:19:42.17:547,42,0	1/1:11,0:11:9.10:178,9,0	0/1:10,6:16:43.13:291,0,43	1/1:7,0:7:8.60:117,9,0	1/1:11,0:11:8.01:192,8,0	1/1:10,0:11:12.18:221,12,0	0/0:11,0:11:29.84:0,30,230	0/0:19,0:19:52.89:0,53,373	0/0:4,0:3:1.11:0,1,5	0/1:5,0:5:10.31:25,0,10	0/1:8,0:8:15.90:25,0,16	1/1:2,0:2:6.02:71,6,0	1/1:11,0:11:13.71:242,14,0	0/1:4,1:5:27.81:88,0,28	1/1:2,2:4:5.91:38,6,0	0/1:9,0:9:5.56:110,0,6	1/1:8,0:9:10.35:172,10,0	1/1:12,1:13:12.50:292,12,0	1/1:1,0:1:3.01:35,3,0
chr10	35898111	.	G	GTTT	6036.29	PASS	AB=1.000;AC=45;AF=0.804;AN=56;BaseQRankSum=5.146;DP=307;FS=10.585;HRun=6;HaplotypeScore=230.7581;InbreedingCoeff=0.7865;MQ=35.85;MQ0=1;MQRankSum=-1.025;QD=24.44;ReadPosRankSum=0.145;VQSLOD=0.6317;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,0:8:8.31:79,8,0	1/1:5,0:5:8.85:73,9,0	0/0:5,0:4:8.79:0,9,74	0/1:14,0:5:7.02:11,0,7	0/0:12,0:12:23.99:0,24,291	1/1:5,7:12:24.08:377,24,0	1/1:4,4:9:19.81:244,20,0	1/1:6,2:8:21.04:303,21,0	0/0:11,0:11:33.09:0,33,448	1/1:10,13:23:60.17:962,60,0	1/1:7,5:13:26.23:309,26,0	1/1:20,1:21:43.80:316,44,0	1/1:8,2:10:23.78:288,24,0	1/1:8,5:13:21.07:311,21,0	1/1:7,6:13:29.89:428,30,0	0/0:10,0:10:27.08:0,27,380	0/0:22,0:22:53.82:0,54,614	1/1:5,1:5:9:100,9,0	1/1:6,1:7:9.01:112,9,0	1/1:12,0:12:14.94:143,15,0	1/1:1,2:3:8.98:116,9,0	1/1:7,7:14:33.07:460,33,0	1/1:7,0:7:14.59:109,15,0	1/1:5,0:5:5.95:44,6,0	1/1:11,3:14:26.78:334,27,0	1/1:8,5:13:30:428,30,0	1/1:10,5:15:32.86:421,33,0	1/1:1,1:2:5.98:70,6,0
chr10	35898122	.	T	TAG	6679.95	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=0.702;DP=255;FS=14.289;HRun=0;HaplotypeScore=191.4699;InbreedingCoeff=0.7621;MQ=36.81;MQ0=0;MQRankSum=-4.508;QD=27.83;ReadPosRankSum=2.017;VQSLOD=5.3767;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,5:5:11.93:99,12,0	1/1:0,4:4:12.02:115,12,0	0/0:7,0:5:11.53:0,12,134	0/0:8,0:4:6.02:0,6,79	1/1:0,11:11:26.97:252,27,0	1/1:0,8:8:24.04:235,24,0	1/1:1,7:8:24.04:231,24,0	1/1:1,8:9:24.07:280,24,0	1/1:0,10:10:30.04:284,30,0	1/1:0,22:22:66.09:731,66,0	1/1:0,10:11:29.98:259,30,0	1/1:0,17:17:51.02:467,51,0	1/1:1,8:9:23.03:222,23,0	1/1:0,10:10:24.73:200,25,0	1/1:0,12:12:36.04:340,36,0	1/1:0,9:9:27.05:268,27,0	1/1:0,16:16:48.06:467,48,0	1/1:0,4:4:12:118,12,0	1/1:0,4:4:12.04:156,12,0	1/1:0,7:7:21.01:189,21,0	1/1:0,4:4:9.01:86,9,0	1/1:0,13:13:39.01:349,39,0	1/1:0,7:7:20.99:181,21,0	1/1:0,5:5:8.96:101,9,0	1/1:0,9:9:26.70:233,27,0	1/1:0,11:11:33.09:368,33,0	1/1:0,13:13:38.65:380,39,0	1/1:0,2:2:6.02:69,6,0
chr10	35898124	.	AAG	A	3048.55	PASS	AB=0.750;AC=52;AF=0.929;AN=56;BaseQRankSum=0.789;DP=258;FS=11.222;HRun=0;HaplotypeScore=204.4021;InbreedingCoeff=0.3254;MQ=36.66;MQ0=0;MQRankSum=-2.078;QD=12.24;ReadPosRankSum=1.138;VQSLOD=2.6765;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:0,5:5:1.59:27,0,2	1/1:0,4:4:11.31:55,11,0	0/1:8,0:5:10.32:10,0,123	0/0:9,0:4:6.02:0,6,101	1/1:0,11:11:23.26:93,23,0	1/1:0,8:8:22.82:116,23,0	1/1:1,7:8:22.62:112,23,0	1/1:1,8:9:23.75:161,24,0	1/1:0,10:10:28.17:135,28,0	1/1:0,22:22:62.22:402,62,0	1/1:1,10:11:18.83:82,19,0	1/1:0,17:17:46.48:214,46,0	1/1:1,8:9:6.91:86,7,0	1/1:0,10:10:4.59:59,5,0	1/1:0,12:12:33.69:161,34,0	1/1:0,9:9:25.76:134,26,0	1/1:1,16:17:47.85:263,48,0	1/1:0,4:4:11.11:59,11,0	1/1:0,4:4:11.97:97,12,0	1/1:0,7:7:19.20:85,19,0	1/1:0,4:4:8.43:41,8,0	1/1:0,13:13:35.48:156,35,0	1/1:0,7:7:18.65:77,19,0	1/1:0,5:5:7.78:30,8,0	1/1:0,9:9:20.68:100,21,0	1/1:0,11:11:32.41:202,32,0	1/1:0,13:13:31.39:162,31,0	1/1:0,2:2:5.91:39,6,0
chr10	35898576	.	AAAAAC	A	12826.62	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=13.600;DP=682;FS=3.062;HRun=0;HaplotypeScore=111.9539;InbreedingCoeff=0.9521;MQ=58.55;MQ0=8;MQRankSum=0.333;QD=25.20;ReadPosRankSum=1.972;VQSLOD=4.6356;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,29:35:48.16:904,48,0	1/1:1,4:5:12.04:199,12,0	0/0:16,0:10:18.06:0,18,341	0/0:23,0:10:6.08:0,6,278	0/0:40,0:39:84.27:0,84,2106	1/1:4,18:22:18.06:340,18,0	1/1:11,16:27:12.04:221,12,0	1/1:15,19:33:57:768,57,0	0/0:32,0:32:81.27:0,81,2018	1/1:5,21:26:63.21:1092,63,0	1/1:2,12:14:26.99:349,27,0	1/1:7,28:35:36.04:652,36,0	1/1:1,16:17:24.08:452,24,0	1/1:1,10:11:15.05:284,15,0	1/1:4,23:27:39.13:737,39,0	0/0:26,0:26:63.18:0,63,1486	0/0:36,0:36:78.25:0,78,1837	1/1:5,21:25:27.09:510,27,0	1/1:10,21:28:63.14:929,63,0	1/1:7,11:18:29.97:424,30,0	1/1:7,11:18:12.04:227,12,0	1/1:3,18:21:54.05:814,54,0	1/1:6,11:15:27.04:462,27,0	1/1:5,15:20:24.08:445,24,0	1/1:7,26:33:33.07:583,33,0	1/1:7,24:31:72.20:1231,72,0	1/1:8,19:27:31.93:581,32,0	1/1:0,14:14:33.11:624,33,0
chr10	35899090	.	CAA	C	1429.75	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-11.228;DP=550;FS=5.903;HRun=13;HaplotypeScore=174.6594;InbreedingCoeff=0.9510;MQ=52.31;MQ0=13;MQRankSum=3.297;QD=16.43;ReadPosRankSum=1.279;VQSLOD=0.8809;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:83.51:0,84,1091	0/0:15,0:15:32.88:0,33,256	0/0:3,0:2:6.02:0,6,82	0/0:8,0:7:8.81:0,9,116	1/1:6,12:18:23.58:263,24,0	0/0:14,0:14:32.89:0,33,257	0/0:28,0:28:62.76:0,63,490	0/0:23,0:20:53.69:0,54,407	1/1:5,8:11:20.96:204,21,0	0/0:33,0:32:89.66:0,90,698	0/0:27,0:26:56.84:0,57,463	0/0:8,0:16:30.04:0,30,323	0/0:17,0:17:26.91:0,27,211	0/0:18,0:18:29.93:0,30,253	0/0:29,0:28:71.73:0,72,559	1/1:4,13:17:41.79:390,42,0	1/1:8,27:35:65.79:733,66,0	0/0:18,0:17:35.89:0,36,285	0/0:20,0:16:35.88:0,36,282	0/0:28,0:27:62.04:0,62,483	0/0:15,0:14:29.93:0,30,261	0/0:14,0:14:23.92:0,24,188	0/0:5,0:16:39.06:0,39,436	0/0:4,0:10:21.04:0,21,217	0/0:14,0:14:38.89:0,39,313	0/0:21,0:21:50.82:0,51,397	0/0:21,0:20:53.82:0,54,424	0/0:15,0:14:35.86:0,36,280
chr10	35899095	.	A	AC	10292.34	PASS	AB=0.691;AC=35;AF=0.625;AN=56;BaseQRankSum=9.050;DP=555;FS=1.676;HRun=0;HaplotypeScore=138.1057;InbreedingCoeff=0.7727;MQ=53.36;MQ0=12;MQRankSum=0.983;QD=26.73;ReadPosRankSum=3.663;VQSLOD=4.9661;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:35:95.51:0,96,1118	1/1:0,13:13:33.11:426,33,0	0/0:3,0:2:5.98:0,6,61	0/0:10,0:8:22.14:0,22,184	0/0:21,0:20:47.60:0,48,341	1/1:1,14:15:33.08:424,33,0	1/1:0,29:29:63.20:808,63,0	0/1:2,21:22:11.99:612,0,12	0/0:12,0:10:29.75:0,30,211	1/1:0,32:31:90.08:1129,90,0	1/1:4,23:26:27.98:617,28,0	0/0:16,0:16:9.44:0,9,135	1/1:1,14:15:27.07:347,27,0	1/1:2,15:17:27.06:341,27,0	1/1:4,27:30:72.18:930,72,0	0/0:17,0:16:47.46:0,47,330	0/0:38,0:36:98.19:0,98,699	1/1:3,17:19:29.15:420,29,0	1/1:4,14:15:42.01:498,42,0	1/1:3,25:27:63.14:789,63,0	0/1:3,13:15:11.59:298,0,12	1/1:0,15:15:24.08:308,24,0	0/0:16,0:16:5.13:0,5,152	0/1:10,0:9:0.67:1,0,28	1/1:0,15:15:39.06:480,39,0	1/1:0,20:20:60.02:713,60,0	1/1:4,21:24:54.12:689,54,0	1/1:1,15:15:36.12:465,36,0
chr10	35900880	.	C	CTTT	4750.14	PASS	AB=0.865;AC=44;AF=0.786;AN=56;BaseQRankSum=0.227;DP=421;FS=26.091;HRun=17;HaplotypeScore=110.3887;InbreedingCoeff=0.5583;MQ=59.09;MQ0=7;MQRankSum=-6.871;QD=13.46;ReadPosRankSum=-4.083;VQSLOD=-0.2003;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:17:35.03:349,35,0	1/1:2,1:6:10.55:105,11,0	0/1:15,0:12:1.92:2,0,43	0/1:10,0:7:0.16:0,0,1	0/0:3,0:16:32.25:0,32,201	0/1:10,4:17:3.05:181,0,3	1/1:9,0:15:13.70:201,14,0	1/1:33,1:36:47.19:460,47,0	0/0:5,0:7:5.57:0,6,36	1/1:5,0:5:3.01:35,3,0	1/1:3,5:8:9.94:106,10,0	1/1:18,1:19:41.78:463,42,0	1/1:12,0:13:23.47:190,23,0	1/1:14,0:16:12.97:194,13,0	1/1:8,6:18:31.84:282,32,0	0/0:8,0:12:12.62:0,13,86	0/0:16,0:32:28.25:0,28,187	1/1:16,1:17:11.30:203,11,0	1/1:19,1:22:6.24:347,6,0	1/1:2,2:9:12.01:164,12,0	1/1:7,4:11:3.48:35,3,0	0/1:6,2:7:17.84:86,0,18	1/1:18,2:21:44.81:476,45,0	1/1:10,0:11:9.11:60,9,0	1/1:4,1:6:9:103,9,0	1/1:10,7:19:32.98:385,33,0	1/1:16,0:15:29.30:273,29,0	1/1:6,0:8:6.86:50,7,0
chr10	35901049	.	TCA	T	3679.75	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=10.033;DP=629;FS=7.071;HRun=0;HaplotypeScore=90.5365;InbreedingCoeff=0.9988;MQ=59.14;MQ0=4;MQRankSum=0.515;QD=34.39;ReadPosRankSum=3.231;VQSLOD=5.7357;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,40:41:99:1455,99,0	0/0:10,0:10:27.09:0,27,505	0/0:29,0:25:68.10:0,68,1142	0/0:30,0:28:79.57:0,80,1310	0/0:17,0:17:45.12:0,45,779	0/0:19,0:19:51.16:0,51,921	0/0:41,0:41:99:0,114,2063	0/0:22,0:22:63.22:0,63,1179	0/0:28,0:28:69.22:0,69,1248	0/0:17,0:17:51.17:0,51,935	0/0:14,0:14:36.11:0,36,641	1/1:2,17:19:36.12:529,36,0	0/0:23,0:23:63.20:0,63,1138	0/0:26,0:25:75.24:0,75,1360	0/0:22,0:22:60.16:0,60,1055	0/0:27,0:27:63.22:0,63,1179	0/0:29,0:29:72.25:0,72,1320	0/0:34,0:34:99:0,102,1874	0/0:14,0:14:39.11:0,39,670	0/0:14,0:14:42.14:0,42,785	0/0:46,0:46:99:0,130,2364	0/0:15,0:15:39.13:0,39,729	1/1:0,13:13:36.12:530,36,0	1/1:2,32:31:81.22:1166,81,0	0/0:8,0:8:24.08:0,24,448	0/0:13,0:13:39.13:0,39,730	0/0:13,0:13:39.13:0,39,728	0/0:11,0:11:30.10:0,30,559
chr10	35901116	.	CGTGTGTGTGTGTGTGTGTGTGTGT	C	2664.98	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=4.832;DP=647;FS=0.000;HRun=0;HaplotypeScore=315.0655;InbreedingCoeff=0.7323;MQ=55.27;MQ0=20;MQRankSum=-4.291;QD=29.94;ReadPosRankSum=1.445;VQSLOD=1.7134;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:35:24.97:0,25,1315	0/0:5,0:5:12.04:0,12,807	0/0:37,0:21:19.65:0,20,226	0/0:42,0:25:36.12:0,36,644	1/1:4,9:13:3.70:190,4,0	0/0:9,0:18:12.04:0,12,635	0/0:32,0:31:28.51:0,29,669	0/0:24,0:22:39.12:0,39,960	1/1:11,19:29:16.66:951,17,0	0/0:14,0:14:27.09:0,27,1289	0/0:11,0:11:5.69:0,6,361	0/0:12,0:21:36.12:0,36,1246	0/0:27,0:27:51.65:0,52,2634	0/0:11,0:21:24.55:0,25,1203	0/0:18,0:18:21.07:0,21,1053	1/1:9,17:27:24.08:1467,24,0	1/1:9,9:18:5.51:198,6,0	0/0:24,0:24:36.12:0,36,1862	0/0:15,0:15:24.08:0,24,1360	0/0:12,0:12:3.01:0,3,97	0/0:62,0:59:43.66:0,44,2568	0/0:8,0:13:2.96:0,3,46	0/0:13,0:15:12.04:0,12,445	0/0:26,0:27:24:0,24,828	0/0:10,0:14:3.48:0,3,334	0/0:24,0:23:39.13:0,39,2232	0/0:22,0:21:45.15:0,45,2844	0/0:17,0:15:12.04:0,12,450
chr10	35901511	.	CAGTT	C	16813.63	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=12.475;DP=628;FS=1.368;HRun=0;HaplotypeScore=115.7399;InbreedingCoeff=0.9585;MQ=76.64;MQ0=1;MQRankSum=-7.805;QD=49.02;ReadPosRankSum=3.170;VQSLOD=5.9010;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:57:99:0,157,4273	1/1:1,3:4:6.02:116,6,0	0/0:15,0:15:30.72:0,31,1025	0/0:21,0:21:62.88:0,63,1544	0/0:32,0:32:87.25:0,87,2274	1/1:1,20:21:48.16:931,48,0	1/1:0,21:21:51.17:987,51,0	1/1:4,26:30:81.27:1535,81,0	0/0:21,0:21:63.22:0,63,1718	1/1:2,16:18:48.15:896,48,0	1/1:2,15:17:33.11:639,33,0	0/0:22,0:22:63.19:0,63,1610	1/1:0,20:20:48.02:930,48,0	1/1:0,15:15:42.14:814,42,0	1/1:3,40:43:99:2093,108,0	0/0:38,0:38:99:0,114,2971	0/0:28,0:28:81.28:0,81,2206	1/1:1,14:15:39.13:756,39,0	1/1:2,13:15:36.12:667,36,0	1/1:0,11:11:33.11:639,33,0	1/1:1,32:32:84.29:1628,84,0	1/1:0,16:16:42.14:814,42,0	0/0:21,0:21:60.21:0,60,1607	0/0:30,0:30:90.27:0,90,2386	1/1:0,8:8:24.08:465,24,0	1/1:0,21:21:60.21:1162,60,0	1/1:3,31:34:87.30:1684,87,0	1/1:0,1:1:3.01:57,3,0
chr10	35901776	.	TC	T	2015.98	PASS	AB=1.000;AC=46;AF=0.852;AN=54;BaseQRankSum=0.855;DP=234;FS=2.221;HRun=2;HaplotypeScore=36.4269;InbreedingCoeff=-0.1056;MQ=38.03;MQ0=38;MQRankSum=-2.642;QD=8.65;ReadPosRankSum=0.819;VQSLOD=1.2024;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:8,0:7:9.60:15,0,10	1/1:3,1:4:8.95:79,9,0	./.	0/1:3,0:1:0:0,0,0	0/1:14,0:12:15.21:23,0,15	1/1:3,11:11:10.86:165,11,0	1/1:1,6:6:11.98:119,12,0	1/1:10,3:12:23.86:193,24,0	0/1:8,0:8:13.31:28,0,13	1/1:4,4:6:12:116,12,0	1/1:4,2:4:5.85:34,6,0	0/1:14,0:11:21.06:42,0,21	1/1:6,2:6:14.97:130,15,0	1/1:5,7:9:8.97:77,9,0	1/1:2,11:13:6.02:68,6,0	0/1:9,0:9:3.81:46,0,4	0/1:10,0:9:6.63:23,0,7	0/1:12,0:5:0:41,0,0	1/1:9,2:8:17.88:151,18,0	1/1:2,1:3:2.97:20,3,0	1/1:1,3:3:5.98:55,6,0	1/1:5,0:2:5.96:45,6,0	1/1:9,0:7:10.42:60,10,0	1/1:3,0:3:2.72:15,3,0	1/1:4,1:3:8.98:83,9,0	1/1:8,3:10:17.69:164,18,0	1/1:9,5:14:22.89:273,23,0	1/1:2,3:3:6.02:70,6,0
chr10	35901778	.	CG	C	2945.23	PASS	AB=1.000;AC=53;AF=0.981;AN=54;BaseQRankSum=-2.101;DP=225;FS=1.668;HRun=2;HaplotypeScore=32.0575;InbreedingCoeff=0.1021;MQ=37.75;MQ0=38;MQRankSum=-1.042;QD=13.21;ReadPosRankSum=-2.246;VQSLOD=1.7712;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,3:8:13.09:96,13,0	1/1:4,0:4:8.95:79,9,0	./.	0/1:2,0:1:0:0,0,0	1/1:11,2:11:23.85:194,24,0	1/1:14,0:11:10.87:165,11,0	1/1:7,0:6:11.98:119,12,0	1/1:13,0:12:23.86:193,24,0	1/1:6,2:8:17.58:181,18,0	1/1:7,0:5:12:116,12,0	1/1:5,1:4:5.85:34,6,0	1/1:7,6:10:14.99:148,15,0	1/1:8,0:6:14.97:130,15,0	1/1:12,0:9:8.97:77,9,0	1/1:11,0:11:6.02:68,6,0	1/1:6,2:8:24.02:228,24,0	1/1:9,1:9:14.99:134,15,0	1/1:11,0:4:0.03:41,0,0	1/1:10,0:7:17.88:151,18,0	1/1:3,0:3:2.97:20,3,0	1/1:4,0:3:5.98:55,6,0	1/1:5,0:2:5.96:45,6,0	1/1:5,3:6:12.02:125,12,0	1/1:1,1:2:3.01:34,3,0	1/1:5,0:3:8.98:83,9,0	1/1:9,0:8:17.69:164,18,0	1/1:15,0:15:22.92:273,23,0	1/1:5,0:3:6.02:70,6,0
chr10	35901779	.	GGA	G	1418.63	PASS	AB=0.970;AC=30;AF=0.556;AN=54;BaseQRankSum=3.903;DP=274;FS=52.969;HRun=0;HaplotypeScore=44.0025;InbreedingCoeff=-0.5906;MQ=40.63;MQ0=39;MQRankSum=-4.322;QD=5.31;ReadPosRankSum=8.466;VQSLOD=0.4226;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:14,1:13:45.35:45,0,96	0/1:4,0:4:5.54:26,0,6	./.	0/0:4,0:1:1.82:0,2,5	1/1:13,0:12:17.41:142,17,0	0/1:16,0:13:21.74:22,0,26	0/1:8,0:7:10.03:28,0,10	0/1:16,1:16:61.64:105,0,62	0/1:9,0:9:1.03:92,0,1	0/1:7,0:5:11.17:50,0,11	0/1:7,1:6:23.22:23,0,53	0/1:10,1:8:6.22:88,0,6	0/1:8,2:8:7.18:89,0,7	0/1:15,1:13:33.19:33,0,74	0/1:14,0:14:5:5,0,32	1/1:8,1:9:22.96:194,23,0	1/1:9,1:8:14.45:127,14,0	0/1:13,0:6:32.24:32,0,63	0/1:13,0:10:47.86:72,0,48	0/1:3,0:3:10.91:11,0,36	0/1:5,0:4:14.85:20,0,15	0/1:6,1:4:35.31:52,0,35	0/1:10,0:8:46.79:51,0,47	1/1:1,0:1:2.37:8,2,0	0/1:7,0:5:32.78:42,0,33	0/1:10,0:9:17.54:82,0,18	0/1:24,0:24:99:116,0,196	0/1:6,0:4:9.29:9,0,15
chr10	35902060	.	G	GAAAAAC	16880.03	PASS	AB=0.842;AC=48;AF=0.889;AN=54;BaseQRankSum=-3.833;DP=490;FS=14.675;HRun=0;HaplotypeScore=92.8527;InbreedingCoeff=0.4496;MQ=41.21;MQ0=55;MQRankSum=-1.953;QD=38.36;ReadPosRankSum=1.336;VQSLOD=3.8439;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:16,9:24:36.12:1142,36,0	1/1:4,3:6:12.04:383,12,0	0/0:28,0:10:21.02:0,21,360	0/0:13,0:4:6.02:0,6,98	1/1:15,9:24:36.12:1051,36,0	1/1:9,8:12:21.07:677,21,0	1/1:13,5:14:18.06:587,18,0	1/1:27,2:11:12.03:346,12,0	1/1:4,9:14:24.08:783,24,0	1/1:11,6:15:30.10:874,30,0	1/1:13,6:16:24.08:766,24,0	1/1:7,5:11:18.06:587,18,0	1/1:5,8:12:27.09:838,27,0	1/1:12,6:14:24.08:772,24,0	1/1:12,9:18:30.10:897,30,0	0/1:17,5:22:52.32:688,0,52	0/1:18,2:19:53.73:469,0,54	1/1:12,1:12:12.04:339,12,0	1/1:9,1:6:9.03:266,9,0	1/1:13,8:19:30.09:937,30,0	./.	1/1:6,1:7:9.03:231,9,0	1/1:17,9:24:39.13:1200,39,0	1/1:9,1:10:6.02:196,6,0	1/1:13,7:19:24.08:775,24,0	1/1:15,10:24:3.18:1129,3,0	1/1:14,4:16:21.07:654,21,0	1/1:2,3:5:9.03:294,9,0
chr10	35902141	.	A	AAATTTAC	24914.07	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-4.921;DP=440;FS=0.515;HRun=0;HaplotypeScore=99.8129;InbreedingCoeff=0.9674;MQ=56.41;MQ0=3;MQRankSum=-10.981;QD=74.15;ReadPosRankSum=-2.471;VQSLOD=4.3322;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,3:13:18.06:576,18,0	1/1:3,6:10:24.08:899,24,0	0/0:15,0:11:27.09:0,27,669	0/0:9,0:7:12.51:0,13,263	0/0:29,0:29:63.22:0,63,1580	1/1:6,8:13:30.10:1071,30,0	1/1:3,9:11:21.07:779,21,0	1/1:12,0:9:21.03:274,21,0	0/0:16,0:16:42.14:0,42,1045	1/1:9,13:27:69.21:2451,69,0	1/1:4,5:13:27.05:802,27,0	1/1:5,10:16:42.14:1501,42,0	1/1:3,10:16:39.13:1499,39,0	1/1:3,11:12:36.12:1324,36,0	1/1:5,9:14:36.12:1361,36,0	0/0:19,0:19:51.16:0,51,1200	0/0:16,0:16:36.12:0,36,911	1/1:3,5:8:18.02:611,18,0	1/1:8,7:17:42.11:1199,42,0	1/1:3,11:17:42.14:1311,42,0	1/1:5,4:11:12.01:340,12,0	1/1:4,15:20:54.19:1856,54,0	1/1:9,9:18:45.14:1230,45,0	1/1:4,2:8:9.03:307,9,0	1/1:1,6:9:18.06:614,18,0	1/1:7,11:22:60.21:2069,60,0	1/1:8,13:24:63.09:2134,63,0	1/1:0,6:10:18.06:708,18,0
chr10	35903203	.	TA	T	7086.21	PASS	AB=0.571;AC=51;AF=0.911;AN=56;BaseQRankSum=0.902;DP=424;FS=26.781;HRun=11;HaplotypeScore=87.3053;InbreedingCoeff=0.4877;MQ=54.25;MQ0=6;MQRankSum=-0.707;QD=17.08;ReadPosRankSum=1.572;VQSLOD=3.9031;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,28:28:77.87:634,78,0	1/1:4,8:12:23.97:197,24,0	0/0:6,0:4:9.02:0,9,94	0/0:3,0:1:0.89:0,1,2	1/1:4,23:26:36.83:510,37,0	1/1:7,18:25:21.94:387,22,0	1/1:1,9:10:23.97:197,24,0	1/1:7,24:29:62.90:517,63,0	1/1:2,8:10:17.98:148,18,0	1/1:2,13:14:38.95:318,39,0	1/1:6,13:18:32.92:271,33,0	1/1:2,8:10:26.97:221,27,0	1/1:1,10:10:26.97:222,27,0	0/1:2,6:8:14.01:105,0,14	1/1:2,8:10:23.97:197,24,0	1/1:4,8:12:23.97:197,24,0	1/1:4,21:24:47.84:381,48,0	1/1:7,17:22:38.95:320,39,0	1/1:5,14:18:12.97:307,13,0	1/1:2,14:16:38.90:315,39,0	1/1:0,4:4:8.99:74,9,0	1/1:1,4:5:8.94:68,9,0	1/1:0,7:7:20.98:172,21,0	1/1:1,3:3:5.99:49,6,0	1/1:3,13:16:2.74:218,3,0	1/1:7,18:25:55.95:449,56,0	1/1:2,14:16:32.93:267,33,0	1/1:5,17:21:41.93:345,42,0
chr10	35903224	.	ACCCTACAC	A	3727.97	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=4.938;DP=442;FS=2.842;HRun=0;HaplotypeScore=157.6769;InbreedingCoeff=0.8816;MQ=68.82;MQ0=1;MQRankSum=-9.816;QD=63.19;ReadPosRankSum=1.744;VQSLOD=3.6897;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,22:25:63.22:1841,63,0	0/0:10,0:10:30.10:0,30,1359	0/0:11,0:9:24.08:0,24,931	0/1:8,0:6:2.12:2,0,546	0/0:29,0:29:87.30:0,87,3939	0/0:22,0:22:63.22:0,63,2699	0/0:12,0:12:33.11:0,33,1473	0/0:33,0:32:96.30:0,96,3775	0/0:12,0:12:27.09:0,27,1223	0/0:15,0:15:45.15:0,45,1986	0/0:17,0:17:51.18:0,51,2251	1/1:2,10:12:30.10:849,30,0	0/0:11,0:11:30.10:0,30,1275	0/0:7,0:7:18.06:0,18,725	0/0:15,0:15:45.15:0,45,2039	0/0:11,0:11:30.10:0,30,1359	0/0:25,0:25:66.23:0,66,2957	0/0:22,0:22:60.21:0,60,2718	0/0:16,0:16:48.16:0,48,1885	0/0:20,0:19:57.20:0,57,2453	0/0:10,0:10:27.09:0,27,1209	0/0:10,0:10:30.10:0,30,1358	1/1:1,10:11:30.10:861,30,0	1/1:1,2:3:6.02:176,6,0	0/0:15,0:15:42.14:0,42,1897	0/0:24,0:24:69.24:0,69,3036	0/0:15,0:14:42.14:0,42,1882	0/0:21,0:21:50.99:0,51,2178
chr10	35903331	.	A	AT	7853.38	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-1.842;DP=526;FS=4.519;HRun=9;HaplotypeScore=71.6441;InbreedingCoeff=0.9900;MQ=80.77;MQ0=0;MQRankSum=-0.614;QD=24.93;ReadPosRankSum=0.329;VQSLOD=5.6220;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:79.43:0,79,830	1/1:1,4:5:12.03:133,12,0	0/0:26,0:22:31.41:0,31,303	0/0:23,0:19:24.89:0,25,254	0/0:25,0:26:73.99:0,74,622	1/1:3,27:30:54.15:597,54,0	1/1:1,10:11:21.06:232,21,0	1/1:4,32:36:93.52:990,94,0	0/0:5,0:5:15:0,15,130	1/1:0,14:14:42.11:465,42,0	1/1:2,15:17:42.11:462,42,0	0/0:14,0:14:32.98:0,33,286	1/1:2,10:12:24.06:266,24,0	1/1:1,14:15:36.10:398,36,0	1/1:3,15:18:33.09:365,33,0	0/0:16,0:16:35.99:0,36,313	0/0:26,0:26:59.98:0,60,520	1/1:3,17:19:45.12:496,45,0	1/1:3,18:21:33.38:573,33,0	1/1:6,14:20:42.01:435,42,0	1/1:4,14:18:39.11:431,39,0	1/1:0,15:15:39.11:431,39,0	0/0:17,0:17:50.99:0,51,442	0/0:20,0:20:56.97:0,57,490	1/1:2,10:12:19:318,19,0	1/1:7,19:26:57.15:630,57,0	1/1:1,16:17:36.10:398,36,0	1/1:0,7:7:21.06:232,21,0
chr10	35903463	.	AT	A	1471.23	PASS	AB=0.917;AC=9;AF=0.161;AN=56;BaseQRankSum=2.868;DP=553;FS=3.700;HRun=10;HaplotypeScore=70.7664;InbreedingCoeff=0.8206;MQ=68.65;MQ0=0;MQRankSum=1.755;QD=15.17;ReadPosRankSum=2.811;VQSLOD=4.2329;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:48:99:0,104,571	0/0:4,0:3:9.02:0,9,99	0/1:10,1:9:14.49:14,0,82	0/0:12,0:11:13.84:0,14,101	1/1:2,18:20:38.97:339,39,0	0/0:20,1:21:34.11:0,34,604	0/0:21,2:23:5.03:0,5,503	0/0:39,0:39:99:0,100,1082	1/1:4,13:17:32.98:286,33,0	0/0:17,0:17:48.13:0,48,531	0/0:16,0:16:39.11:0,39,431	0/0:2,0:20:48.57:0,49,244	0/0:20,0:20:57.13:0,57,616	0/0:19,0:19:48.12:0,48,523	0/0:15,0:15:42.10:0,42,457	1/1:2,22:24:56.98:495,57,0	1/1:3,21:25:59.02:501,59,0	0/0:18,0:18:19.27:0,19,438	0/0:27,0:27:75.17:0,75,807	0/0:9,0:9:24.05:0,24,257	0/0:18,0:18:54.15:0,54,597	0/0:15,0:15:42.10:0,42,455	0/0:3,0:17:38.68:0,39,200	0/0:1,0:27:60.33:0,60,309	0/0:8,0:8:15.04:0,15,166	0/0:28,0:28:72.19:0,72,796	0/0:18,0:18:45.12:0,45,493	0/0:17,0:17:36.10:0,36,398
chr10	35903639	.	G	GGC	2550.58	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-7.858;DP=604;FS=0.556;HRun=0;HaplotypeScore=74.0414;InbreedingCoeff=0.9977;MQ=70.50;MQ0=0;MQRankSum=-0.465;QD=34.01;ReadPosRankSum=2.048;VQSLOD=5.8844;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:84.26:0,84,1262	0/0:7,0:7:21.07:0,21,321	0/0:24,0:23:54.24:0,54,814	0/0:24,0:23:51.11:0,51,679	1/1:0,24:24:56.95:963,57,0	0/0:22,0:22:66.12:0,66,916	0/0:31,0:29:78.18:0,78,1083	0/0:34,0:34:93.20:0,93,1253	1/1:1,17:19:30.07:543,30,0	0/0:22,0:22:60.20:0,60,917	0/0:18,0:18:50.37:0,50,721	0/0:16,0:16:45.15:0,45,688	0/0:15,0:15:45.15:0,45,688	0/0:10,0:10:30.10:0,30,459	0/0:22,0:22:63.15:0,63,897	1/1:2,11:13:27.09:493,27,0	1/1:1,18:19:39.13:712,39,0	0/0:9,0:9:24.04:0,24,341	0/0:24,0:24:69.23:0,69,1056	0/0:26,0:26:72.23:0,72,1079	0/0:39,0:39:99:0,114,1597	0/0:16,0:16:48.16:0,48,734	0/0:24,0:24:63.19:0,63,924	0/0:30,0:30:87.20:0,87,1311	0/0:15,0:15:39.13:0,39,597	0/0:31,0:31:87.15:0,87,1251	0/0:25,0:25:66.15:0,66,941	0/0:14,0:14:42.13:0,42,621
chr10	35903828	.	ACCC	A	5090.72	PASS	AB=0.858;AC=35;AF=0.625;AN=56;BaseQRankSum=1.208;DP=664;FS=3.840;HRun=3;HaplotypeScore=85.6355;InbreedingCoeff=-0.3664;MQ=27.89;MQ0=134;MQRankSum=-2.282;QD=9.73;ReadPosRankSum=0.561;VQSLOD=1.4098;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:29,3:24:95.59:159,0,96	0/1:7,0:4:10.62:37,0,11	0/0:67,0:4:11.76:0,12,107	0/0:73,0:6:5.60:0,6,98	1/1:13,8:16:7.82:391,8,0	1/1:7,10:15:18.52:462,19,0	0/1:12,3:8:15.65:35,0,16	0/1:27,3:21:80.85:81,0,100	1/1:14,3:9:16.73:194,17,0	0/1:22,3:15:25.84:219,0,26	0/1:17,5:17:49.82:180,0,50	0/1:17,0:14:37.23:95,0,37	1/1:6,4:8:16.73:200,17,0	0/1:4,6:11:14.58:153,0,15	0/1:9,4:8:3.84:115,0,4	1/1:9,1:9:25.78:244,26,0	1/1:29,17:37:4.72:1087,5,0	0/1:21,6:17:83.75:152,0,84	1/1:19,5:14:3.88:262,4,0	0/1:14,5:17:11.45:156,0,11	0/1:11,2:8:25.53:58,0,26	1/1:8,2:8:0:104,0,0	0/1:21,0:13:15.33:15,0,54	0/1:18,0:10:6.47:21,0,6	1/1:6,4:7:2.61:36,3,0	0/1:21,8:19:34.83:350,0,35	0/1:13,13:18:31.11:252,0,31	0/1:23,2:9:31.17:31,0,70
chr10	35903830	.	CCAAA	C	1030.21	PASS	AB=0.960;AC=27;AF=0.482;AN=56;BaseQRankSum=1.837;DP=665;FS=28.623;HRun=0;HaplotypeScore=105.7283;InbreedingCoeff=-0.2527;MQ=29.60;MQ0=130;MQRankSum=-2.971;QD=2.28;ReadPosRankSum=-1.658;VQSLOD=0.3440;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:23:2.72:3,0,261	0/0:7,0:5:2.81:0,3,115	0/0:70,0:6:14.84:0,15,158	0/0:78,0:8:9.26:0,9,120	0/1:20,0:15:7.66:93,0,8	0/1:17,0:15:1.84:2,0,98	0/1:14,0:8:2.65:3,0,67	0/1:30,0:22:61.64:62,0,183	1/1:17,0:10:17:67,17,0	0/1:24,0:15:59.03:59,0,77	0/0:19,0:17:4.45:0,4,232	0/1:9,6:13:5.56:246,0,6	1/1:9,0:7:2.08:8,2,0	0/1:12,0:11:20.65:53,0,21	0/1:12,0:8:7.05:7,0,39	1/1:13,0:9:23.66:101,24,0	1/1:47,0:36:9.51:188,10,0	0/1:28,0:17:22.60:23,0,184	0/1:22,0:14:36.59:37,0,65	0/1:17,0:17:8.48:8,0,111	0/1:13,0:7:23.54:24,0,37	0/0:9,0:8:2.81:0,3,88	0/1:13,8:13:25.91:108,0,26	1/1:12,4:10:0.17:43,0,0	0/1:9,0:7:6.53:7,0,42	0/1:29,0:20:34.36:34,0,215	0/1:27,0:18:8.65:9,0,156	0/0:24,0:9:0.36:0,0,120
chr10	35903843	.	A	ACC	56.34	PASS	AB=0.939;AC=12;AF=0.214;AN=56;BaseQRankSum=6.145;DP=601;FS=19.968;HRun=0;HaplotypeScore=115.9669;InbreedingCoeff=-0.2671;MQ=42.72;MQ0=88;MQRankSum=-2.894;QD=0.29;ReadPosRankSum=2.239;VQSLOD=0.3385;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:30:64.19:0,64,855	0/0:7,0:4:8.92:0,9,88	0/0:74,0:9:16.69:0,17,212	0/0:80,0:15:26.63:0,27,331	0/0:14,0:10:18.61:0,19,164	0/1:16,2:16:30.35:30,0,139	0/1:12,1:8:36.63:37,0,57	0/1:28,0:24:15.58:16,0,467	0/0:10,0:6:6.85:0,7,57	0/0:20,0:15:19.08:0,19,272	0/1:19,1:18:3.36:3,0,264	0/0:12,0:11:25.81:0,26,241	0/1:4,2:5:5.38:5,0,12	0/1:10,0:9:20.78:21,0,86	0/1:8,1:8:23.45:23,0,34	0/0:6,0:6:18.06:0,18,246	0/0:40,0:33:74.20:0,74,922	0/0:22,0:15:3.97:0,4,272	0/0:19,0:15:23.17:0,23,241	0/1:20,0:20:8.39:8,0,168	0/1:15,0:10:1.22:1,0,98	0/1:13,0:11:20.07:20,0,101	0/0:10,0:8:11.90:0,12,124	0/0:15,0:9:6.01:0,6,70	0/1:11,0:8:15.75:16,0,68	0/1:28,1:20:12.11:12,0,381	0/0:21,0:14:1.52:0,2,187	0/0:22,0:9:15.45:0,15,193
chr10	35903850	.	C	CAAAAA	5227.18	PASS	AB=1.000;AC=35;AF=0.625;AN=56;BaseQRankSum=-1.595;DP=503;FS=8.458;HRun=10;HaplotypeScore=109.7519;InbreedingCoeff=0.8383;MQ=47.76;MQ0=49;MQRankSum=-5.898;QD=21.96;ReadPosRankSum=-1.484;VQSLOD=1.8273;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:27:40.88:0,41,642	1/1:4,0:5:3.01:77,3,0	0/0:66,0:9:21:0,21,283	0/0:64,0:15:22.44:0,22,307	0/0:14,0:11:12.10:0,12,84	1/1:11,6:16:41.47:805,41,0	1/1:14,0:11:12.48:185,12,0	1/1:11,3:14:22.62:476,23,0	0/0:11,0:8:7.23:0,7,55	1/1:10,1:14:18.04:390,18,0	1/1:8,8:17:21.07:549,21,0	0/0:12,0:12:20.30:0,20,332	1/1:6,0:5:11.95:215,12,0	1/1:6,1:7:10.28:181,10,0	1/1:7,0:6:6.49:126,6,0	0/0:7,0:7:17.91:0,18,145	0/0:37,0:31:53.61:0,54,461	1/1:17,1:13:11.16:108,11,0	1/1:10,2:11:22.94:336,23,0	1/1:12,1:15:29.62:476,30,0	1/1:11,2:10:19.90:257,20,0	1/1:7,6:12:12.04:307,12,0	0/0:10,0:8:5.79:0,6,91	0/0:13,0:8:5.66:0,6,96	1/1:9,0:6:5.85:94,6,0	1/1:19,5:18:17.56:360,18,0	1/1:13,2:13:25.13:286,25,0	0/1:9,0:8:0:0,0,0
chr10	35903860	.	A	AC	1103.14	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=-3.072;DP=367;FS=1.500;HRun=2;HaplotypeScore=83.6342;InbreedingCoeff=0.7883;MQ=63.94;MQ0=12;MQRankSum=0.300;QD=15.11;ReadPosRankSum=3.029;VQSLOD=3.6499;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:56.89:0,57,593	0/1:3,0:3:0:0,0,0	0/0:38,0:12:23.95:0,24,244	0/0:47,0:17:32.48:0,32,308	1/1:3,13:15:32.60:300,33,0	0/0:11,0:11:21.01:0,21,76	0/0:10,0:10:20.74:0,21,144	0/0:19,0:19:44.10:0,44,302	1/1:3,5:8:9.03:114,9,0	0/0:12,0:12:22.90:0,23,154	0/0:16,0:16:17.08:0,17,80	0/0:12,0:12:29.58:0,30,335	0/0:5,0:5:13.69:0,14,86	0/0:5,0:5:8.63:0,9,47	0/0:4,0:3:5.31:0,5,26	1/1:1,10:11:18.06:240,18,0	1/1:9,26:33:45.62:601,46,0	0/0:8,0:7:14.56:0,15,104	0/0:12,0:12:31.35:0,31,233	0/0:13,0:13:23:0,23,133	0/0:11,0:9:10.56:0,11,84	0/0:6,0:6:10.78:0,11,50	0/0:8,0:8:17.97:0,18,167	0/0:13,0:12:23.92:0,24,211	0/0:3,0:3:5.84:0,6,40	0/0:6,0:5:13.68:0,14,76	0/0:7,0:6:9.44:0,9,74	0/0:2,0:2:2.22:0,2,7
chr10	35904086	.	T	TGGG	10887.34	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-6.148;DP=501;FS=6.446;HRun=8;HaplotypeScore=89.5641;InbreedingCoeff=0.7859;MQ=84.35;MQ0=0;MQRankSum=-7.291;QD=23.57;ReadPosRankSum=4.783;VQSLOD=2.1859;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:30:30.90:67,31,0	1/1:4,0:4:3.01:49,3,0	0/0:13,0:13:33:0,33,380	0/0:26,0:25:53.56:0,54,618	1/1:7,6:17:15.02:264,15,0	1/1:5,12:19:15.04:303,15,0	1/1:4,13:21:42.10:742,42,0	1/1:9,8:18:36.12:671,36,0	1/1:9,16:27:47.96:923,48,0	1/1:8,9:18:21.05:367,21,0	1/1:8,14:25:22.11:426,22,0	1/1:3,0:24:24.14:52,24,0	1/1:7,6:16:27.05:449,27,0	1/1:5,14:20:23.97:440,24,0	1/1:5,22:28:69.21:1310,69,0	1/1:3,19:22:57.20:1151,57,0	1/1:4,20:26:42.14:848,42,0	1/1:5,9:14:15.05:283,15,0	1/1:3,9:13:24.06:446,24,0	1/1:8,5:13:9.03:178,9,0	1/1:13,12:27:24.08:470,24,0	1/1:5,5:11:15.05:303,15,0	1/1:1,0:15:15.84:34,16,0	1/1:0,0:17:15.84:35,16,0	1/1:3,6:9:12.04:242,12,0	1/1:4,3:8:12.02:204,12,0	1/1:2,11:12:27.09:510,27,0	1/1:1,3:5:6.02:121,6,0
chr10	35904798	.	GAGTTCC	G	4185.09	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=11.262;DP=653;FS=25.853;HRun=0;HaplotypeScore=139.1860;InbreedingCoeff=0.9920;MQ=82.10;MQ0=0;MQRankSum=-12.009;QD=43.15;ReadPosRankSum=0.921;VQSLOD=1.9184;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,30:35:72.25:1694,72,0	0/0:5,0:5:15.05:0,15,541	0/0:22,0:21:60.21:0,60,1784	0/0:24,0:24:62.43:0,62,1896	0/0:22,0:22:66.23:0,66,2374	0/0:18,0:18:54.19:0,54,1865	0/0:29,0:29:87.30:0,87,3017	0/0:24,0:24:69.24:0,69,2242	0/0:20,0:20:60.21:0,60,2121	0/0:20,0:20:57.20:0,57,1980	0/0:17,0:17:51.18:0,51,1781	1/1:3,27:30:62.72:1512,63,0	0/0:16,0:16:45.14:0,45,1481	0/0:27,0:27:81.28:0,81,2780	0/0:42,0:42:99:0,120,4272	0/0:25,0:25:75.24:0,75,2500	0/0:35,0:35:99:0,102,3575	0/0:17,0:17:51.15:0,51,1670	0/0:15,0:15:42.11:0,42,1332	0/0:21,0:20:60.18:0,60,2061	0/0:40,0:40:99:0,117,4161	0/0:23,0:23:69.24:0,69,2415	1/1:3,8:11:16.30:364,16,0	1/1:4,17:21:27.98:615,28,0	0/0:19,0:19:57.20:0,57,1997	0/0:36,0:36:99:0,102,3579	0/0:23,0:21:66.23:0,66,2341	0/0:16,0:16:48.16:0,48,1729
chr10	35904933	.	C	CT	4797.90	PASS	AB=0.799;AC=36;AF=0.643;AN=56;BaseQRankSum=-5.212;DP=574;FS=4.802;HRun=14;HaplotypeScore=89.1908;InbreedingCoeff=0.5221;MQ=65.47;MQ0=0;MQRankSum=0.659;QD=10.71;ReadPosRankSum=-3.562;VQSLOD=3.3637;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:17,14:33:17.30:478,17,0	1/1:3,9:12:15:132,15,0	0/1:24,0:18:6.75:7,0,34	0/0:15,1:9:4.68:0,5,25	0/0:23,0:25:39.24:0,39,242	0/1:7,13:21:51.27:184,0,51	1/1:9,19:29:18.40:399,18,0	1/1:8,6:15:15.44:127,15,0	0/0:20,1:23:24.89:0,25,274	1/1:9,14:23:32.96:282,33,0	1/1:6,9:15:18:158,18,0	0/1:18,1:19:8.34:8,0,77	1/1:7,17:24:35.98:310,36,0	1/1:9,13:22:10.72:202,11,0	0/1:16,11:27:5.41:301,0,5	0/0:12,0:12:11.70:0,12,77	0/0:21,0:23:42.03:0,42,261	1/1:4,13:18:10.57:206,11,0	0/1:9,7:18:8.59:188,0,9	1/1:10,14:27:29.82:339,30,0	0/1:10,2:12:13.27:21,0,13	1/1:4,13:19:32.13:303,32,0	0/0:18,0:20:32.52:0,33,189	0/0:7,0:7:11.82:0,12,77	1/1:3,16:20:6.90:212,7,0	1/1:14,17:31:30.60:362,31,0	1/1:14,10:24:17.17:370,17,0	1/1:1,12:13:24:211,24,0
chr10	35905013	.	GA	G	6917.65	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=10.428;DP=569;FS=7.242;HRun=1;HaplotypeScore=60.8548;InbreedingCoeff=0.9998;MQ=81.62;MQ0=0;MQRankSum=-2.350;QD=37.60;ReadPosRankSum=4.107;VQSLOD=5.2053;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,40:41:99:1527,111,0	0/0:17,0:17:51.11:0,51,777	0/0:20,0:20:60.13:0,60,829	0/0:14,0:14:41.98:0,42,564	1/1:0,22:22:62.97:800,63,0	0/0:17,0:17:51.16:0,51,788	0/0:28,0:28:84.27:0,84,1315	0/0:17,0:17:51.16:0,51,770	1/1:0,11:11:30.10:418,30,0	0/0:21,0:21:63.21:0,63,970	0/0:23,0:23:69.24:0,69,1096	1/1:0,26:26:75.25:1039,75,0	0/0:15,0:15:45.15:0,45,718	0/0:15,0:15:39.01:0,39,565	0/0:22,0:22:66.21:0,66,1024	1/1:0,22:22:57.19:795,57,0	1/1:0,26:26:69.23:962,69,0	0/0:18,0:18:54.18:0,54,847	0/0:14,0:14:42.14:0,42,669	0/0:24,0:24:69.23:0,69,1089	0/0:23,0:23:66.22:0,66,1050	0/0:11,0:11:33.11:0,33,524	1/1:0,23:23:63.19:877,63,0	1/1:0,13:13:36.12:500,36,0	0/0:25,0:25:75.26:0,75,1191	0/0:23,0:23:69.24:0,69,1101	0/0:26,0:25:78.23:0,78,1192	0/0:12,0:12:36.12:0,36,558
chr10	35905173	.	C	CAG	1518.20	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=10.748;DP=732;FS=0.000;HRun=0;HaplotypeScore=104.1194;InbreedingCoeff=0.9970;MQ=76.64;MQ0=0;MQRankSum=-10.054;QD=23.00;ReadPosRankSum=-0.552;VQSLOD=3.6472;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:57:99:0,169,2690	0/0:6,0:6:18.06:0,18,294	0/0:28,0:28:78.09:0,78,1206	0/0:24,0:25:65.62:0,66,1099	0/0:24,0:24:72.23:0,72,1148	0/0:21,0:21:63.22:0,63,1028	0/0:31,0:31:90.31:0,90,1469	0/0:33,0:33:99:0,99,1592	0/0:25,0:25:75.26:0,75,1221	0/0:27,0:27:75.25:0,75,1195	0/0:27,0:27:78.24:0,78,1215	1/1:4,17:21:52.52:726,53,0	0/0:25,0:25:75.26:0,75,1223	0/0:29,0:29:84.27:0,84,1340	0/0:30,0:30:87.28:0,87,1392	0/0:35,0:35:99:0,105,1687	0/0:24,0:24:72.25:0,72,1174	0/0:17,0:17:51.15:0,51,799	0/0:16,0:16:48.15:0,48,739	0/0:18,0:18:54.17:0,54,857	0/0:38,0:38:99:0,111,1808	0/0:31,0:31:93.30:0,93,1481	1/1:7,17:24:45.11:571,45,0	1/1:7,14:21:30.60:363,31,0	0/0:18,0:18:54.18:0,54,881	0/0:33,0:33:96.31:0,96,1541	0/0:31,0:31:93.30:0,93,1491	0/0:17,0:17:51.17:0,51,832
chr10	35905174	.	T	TCTA	2066.94	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=10.968;DP=731;FS=0.000;HRun=0;HaplotypeScore=116.8902;InbreedingCoeff=0.9970;MQ=76.54;MQ0=0;MQRankSum=-10.184;QD=31.32;ReadPosRankSum=-0.272;VQSLOD=3.5097;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,166,3049	0/0:6,0:6:18.06:0,18,335	0/0:30,0:30:81.23:0,81,1347	0/0:25,0:25:68.74:0,69,1197	0/0:24,0:24:69.24:0,69,1269	0/0:21,0:21:63.22:0,63,1163	0/0:31,0:31:93.30:0,93,1701	0/0:33,0:33:99:0,99,1808	0/0:25,0:25:75.26:0,75,1380	0/0:27,0:27:78.25:0,78,1378	0/0:27,0:27:78.23:0,78,1345	1/1:1,17:20:57.19:974,57,0	0/0:25,0:25:75.26:0,75,1397	0/0:28,0:28:81.28:0,81,1463	0/0:31,0:31:90.29:0,90,1608	0/0:35,0:35:99:0,102,1883	0/0:24,0:24:72.25:0,72,1339	0/0:17,0:17:51.14:0,51,896	0/0:15,0:15:45.15:0,45,821	0/0:17,0:17:51.17:0,51,951	0/0:38,0:38:99:0,114,2076	0/0:31,0:31:93.29:0,93,1664	1/1:8,17:25:44.99:741,45,0	1/1:7,14:21:33.08:495,33,0	0/0:18,0:18:54.19:0,54,1007	0/0:33,0:33:99:0,99,1783	0/0:32,0:32:93.32:0,93,1716	0/0:17,0:17:51.17:0,51,950
chr10	35907733	.	T	TA	12437.12	PASS	AB=0.567;AC=43;AF=0.768;AN=56;BaseQRankSum=-9.318;DP=600;FS=11.286;HRun=9;HaplotypeScore=58.2706;InbreedingCoeff=0.7375;MQ=68.33;MQ0=2;MQRankSum=-2.290;QD=24.24;ReadPosRankSum=1.403;VQSLOD=5.1675;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,35:39:87.24:962,87,0	1/1:0,7:7:20.73:210,21,0	0/0:16,0:13:23.87:0,24,191	0/0:18,0:15:17.55:0,18,141	1/1:2,20:22:57.11:615,57,0	1/1:5,16:21:25:489,25,0	1/1:0,14:14:33.09:365,33,0	1/1:9,27:37:80.99:842,81,0	1/1:3,13:16:13.06:371,13,0	1/1:7,19:26:31.10:571,31,0	1/1:1,22:23:63.10:679,63,0	0/0:17,0:17:47.96:0,48,412	1/1:0,13:13:36.08:389,36,0	1/1:1,13:14:30.04:332,30,0	1/1:1,29:30:63.17:697,63,0	1/1:2,22:24:51.14:564,51,0	1/1:4,37:41:75.47:1008,75,0	1/1:2,19:21:48.13:531,48,0	1/1:11,19:27:30.11:569,30,0	1/1:3,17:20:51.06:538,51,0	1/1:2,10:12:24.06:265,24,0	0/1:3,6:9:1.72:207,0,2	0/0:18,0:18:50.96:0,51,435	0/0:17,0:17:41.97:0,42,362	0/1:3,11:16:10.16:333,0,10	1/1:6,29:35:87.22:951,87,0	1/1:1,23:24:57.15:624,57,0	0/1:3,14:17:12.99:326,0,13
chr10	35907849	.	T	TAAAC	27793.25	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=0.791;DP=552;FS=0.532;HRun=0;HaplotypeScore=99.1109;InbreedingCoeff=0.9886;MQ=72.28;MQ0=0;MQRankSum=-7.062;QD=56.61;ReadPosRankSum=1.460;VQSLOD=5.7855;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,29:39:84.24:2086,84,0	1/1:3,10:14:30.10:782,30,0	0/0:19,0:18:46.71:0,47,810	0/0:7,0:7:11.02:0,11,161	1/1:3,25:30:75.22:1803,75,0	1/1:2,23:25:60.21:1517,60,0	1/1:3,14:17:33.11:862,33,0	1/1:13,15:33:75.13:1649,75,0	1/1:1,10:12:24.08:640,24,0	1/1:0,19:20:60.21:1486,60,0	1/1:1,18:19:51.17:1190,51,0	0/0:10,0:10:27.09:0,27,504	1/1:4,8:13:21.07:516,21,0	1/1:2,16:19:33.11:872,33,0	1/1:4,20:25:54.19:1383,54,0	1/1:0,19:19:45.15:1177,45,0	1/1:8,17:25:61.05:1498,61,0	1/1:3,21:26:60.21:1550,60,0	1/1:5,15:19:54.19:1382,54,0	1/1:2,17:19:54.05:1209,54,0	1/1:4,9:14:27.09:559,27,0	1/1:7,17:27:42.06:1027,42,0	0/0:12,0:12:33.11:0,33,605	0/0:13,0:13:39.13:0,39,727	1/1:2,11:14:30.10:751,30,0	1/1:3,22:27:78.25:1875,78,0	1/1:1,17:19:45.15:1182,45,0	1/1:1,11:13:30.10:799,30,0
chr10	35908417	.	GGT	G	3116.57	PASS	AB=0.984;AC=32;AF=0.571;AN=56;BaseQRankSum=11.293;DP=561;FS=0.817;HRun=0;HaplotypeScore=144.2484;InbreedingCoeff=0.0417;MQ=73.89;MQ0=0;MQRankSum=-1.099;QD=6.58;ReadPosRankSum=10.689;VQSLOD=2.0802;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:32,1:33:2.82:275,0,3	1/1:9,0:9:18.28:78,18,0	0/0:19,0:14:25.42:0,25,303	0/0:20,0:17:11.01:0,11,224	0/1:14,0:14:48.01:57,0,48	1/1:21,0:21:46.82:203,47,0	0/1:23,1:24:21.22:156,0,21	0/1:20,0:20:51.11:51,0,114	1/1:20,0:20:17.71:146,18,0	1/1:12,0:12:5.43:90,5,0	0/1:11,0:11:1.69:69,0,2	0/0:20,0:20:18.33:0,18,411	1/1:17,0:17:37.74:200,38,0	1/1:26,0:26:30.08:255,30,0	0/1:29,0:29:22.35:194,0,22	1/1:34,0:34:14.81:200,15,0	0/1:29,0:29:51.38:123,0,51	0/1:21,0:21:35.93:108,0,36	0/1:14,1:14:75.17:75,0,89	0/1:11,0:11:31.46:35,0,31	0/1:38,0:38:0.79:215,0,1	0/1:18,1:19:4.67:198,0,5	0/0:7,0:7:14.55:0,15,198	0/0:21,0:21:55.35:0,55,606	0/1:23,0:23:9.22:174,0,9	1/1:19,0:19:11.95:152,12,0	0/1:21,1:22:27.05:156,0,27	1/1:6,1:7:13.70:85,14,0
chr10	35908419	.	TGG	T	11261.27	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=6.630;DP=550;FS=3.298;HRun=10;HaplotypeScore=116.9350;InbreedingCoeff=0.9813;MQ=73.43;MQ0=0;MQRankSum=-2.383;QD=24.32;ReadPosRankSum=5.134;VQSLOD=4.2754;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,29:33:74.64:800,75,0	1/1:0,10:10:21.01:234,21,0	0/0:19,0:14:15.05:0,15,216	0/0:18,0:16:23.41:0,23,284	1/1:2,12:14:27.02:287,27,0	1/1:0,21:21:54.15:600,54,0	1/1:4,19:23:45.12:500,45,0	1/1:6,13:19:36.03:378,36,0	1/1:1,19:20:45.12:501,45,0	1/1:1,10:11:27.07:300,27,0	1/1:2,8:10:18.04:200,18,0	0/0:19,0:20:43.10:0,43,502	1/1:0,17:17:41.97:467,42,0	1/1:2,22:24:53.92:600,54,0	1/1:4,25:29:63.13:694,63,0	1/1:2,32:34:90.23:1003,90,0	1/1:3,24:28:64.98:707,65,0	1/1:4,17:21:42.09:468,42,0	1/1:8,7:14:18.29:220,18,0	1/1:2,10:12:18.03:201,18,0	1/1:5,32:37:84.20:936,84,0	1/1:5,13:18:42.11:465,42,0	0/0:7,0:7:15.01:0,15,207	0/0:22,0:22:59.64:0,60,774	1/1:7,16:23:51.58:567,52,0	1/1:3,15:18:45.12:500,45,0	1/1:4,15:19:42.11:468,42,0	1/1:1,6:7:15.04:166,15,0
chr10	35909264	.	T	TC	15580.16	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=11.199;DP=687;FS=2.205;HRun=1;HaplotypeScore=103.7148;InbreedingCoeff=0.9920;MQ=70.09;MQ0=6;MQRankSum=-8.563;QD=27.92;ReadPosRankSum=6.398;VQSLOD=4.6146;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,44:46:99:1457,110,0	1/1:2,8:10:20.76:265,21,0	0/0:34,0:33:80.82:0,81,954	0/0:21,0:21:57.12:0,57,683	1/1:2,13:14:36.10:462,36,0	1/1:1,23:21:48.16:641,48,0	1/1:1,27:26:60.20:786,60,0	1/1:3,15:13:18.50:219,18,0	1/1:1,28:26:72.21:923,72,0	1/1:4,21:19:35.78:474,36,0	1/1:1,19:19:47.30:621,47,0	0/0:40,0:40:99:0,120,1526	1/1:3,24:27:62.82:831,63,0	1/1:3,31:31:84.27:1105,84,0	1/1:4,27:26:63.67:816,64,0	1/1:3,30:29:84.74:1095,85,0	1/1:1,29:29:69.22:904,69,0	1/1:0,31:31:78.25:1026,78,0	1/1:1,14:7:14.63:179,15,0	1/1:3,11:13:27.27:352,27,0	1/1:1,30:28:65.32:829,65,0	1/1:5,14:16:40:499,40,0	0/0:20,0:20:57.19:0,57,739	0/0:14,0:14:42.14:0,42,544	1/1:2,18:20:50.27:651,50,0	1/1:4,20:18:43.98:550,44,0	1/1:0,22:22:48.15:615,48,0	1/1:0,8:7:21.07:280,21,0
chr10	35910473	.	G	GGAA	583.10	PASS	AB=0.644;AC=22;AF=0.393;AN=56;BaseQRankSum=8.199;DP=508;FS=13.257;HRun=0;HaplotypeScore=95.2271;InbreedingCoeff=-0.3808;MQ=76.13;MQ0=1;MQRankSum=1.351;QD=1.53;ReadPosRankSum=2.798;VQSLOD=1.0360;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:9,0:27:22.47:22,0,98	0/1:2,0:4:9.73:10,0,13	0/0:31,0:21:32.85:0,33,424	0/0:10,0:6:12.23:0,12,126	0/1:4,0:13:53.64:54,0,81	0/0:4,0:25:4.68:0,5,130	0/1:5,0:10:18.93:19,0,79	0/1:11,0:33:99:152,0,152	0/1:5,0:22:43.38:43,0,66	0/1:12,0:23:9.99:10,0,179	0/1:16,0:24:35.93:36,0,245	0/0:16,0:16:31.98:0,32,437	0/1:2,0:21:18.93:19,0,44	0/1:8,0:18:17.76:18,0,86	0/1:9,0:25:30.25:30,0,172	0/1:15,0:17:40.42:40,0,135	0/1:7,0:20:2.87:3,0,124	0/0:6,0:19:19.14:0,19,173	0/1:7,0:18:80.62:81,0,157	0/1:19,0:23:99:140,0,130	1/1:0,0:14:4.90:11,5,0	0/0:0,0:4:0.17:0,0,1	0/0:12,0:12:21.40:0,21,256	0/0:8,0:10:29.71:0,30,404	0/1:5,1:20:7.60:8,0,115	0/1:10,0:20:10.49:10,0,218	0/1:4,0:23:18.54:19,0,69	1/1:1,0:1:2.80:13,3,0
chr10	35911239	.	A	AT	887.36	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=-6.426;DP=513;FS=0.000;HRun=6;HaplotypeScore=46.5234;InbreedingCoeff=0.6987;MQ=70.57;MQ0=0;MQRankSum=1.275;QD=20.17;ReadPosRankSum=0.264;VQSLOD=2.7051;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,30:32:78.25:981,78,0	0/0:9,0:9:27.05:0,27,270	0/0:7,0:7:18.04:0,18,184	0/1:12,0:12:5.42:5,0,167	0/0:32,0:32:90.21:0,90,918	0/0:22,0:22:63.14:0,63,643	0/0:12,0:12:36.05:0,36,355	0/0:30,0:30:81.17:0,81,820	0/0:13,0:13:36.08:0,36,367	0/0:22,0:22:60.13:0,60,607	0/0:13,0:13:36.08:0,36,367	0/0:18,0:18:51.08:0,51,506	0/0:17,0:17:48.11:0,48,489	0/0:17,0:17:48.10:0,48,483	0/0:22,0:22:66.11:0,66,657	0/0:23,0:23:57.12:0,57,581	0/0:21,0:21:54.11:0,54,545	0/0:23,0:23:63.11:0,63,633	0/0:17,0:17:48.10:0,48,485	0/0:15,0:15:42.10:0,42,428	0/0:9,0:9:27.06:0,27,275	0/0:9,0:9:24.05:0,24,245	0/0:14,0:14:33.07:0,33,336	0/0:13,0:13:36.08:0,36,367	0/0:22,0:22:57.01:0,57,557	0/0:15,0:15:39.07:0,39,388	0/0:28,0:28:78.11:0,78,772	0/0:26,0:26:54.10:0,54,543
chr10	35911638	.	T	TA	5449.25	PASS	AB=0.621;AC=39;AF=0.696;AN=56;BaseQRankSum=-1.747;DP=471;FS=0.000;HRun=0;HaplotypeScore=69.9553;InbreedingCoeff=0.5723;MQ=59.01;MQ0=24;MQRankSum=4.356;QD=14.45;ReadPosRankSum=4.802;VQSLOD=5.5327;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:21:37.91:0,38,234	1/1:2,6:8:0.98:51,1,0	0/0:22,0:10:9.90:0,10,161	0/0:9,0:3:5.50:0,5,36	0/1:8,13:23:20.32:165,0,20	1/1:4,11:14:34.51:296,35,0	1/1:3,13:15:26.96:247,27,0	1/1:3,23:25:68.78:624,69,0	0/1:1,5:6:3.75:82,0,4	1/1:4,14:16:41.26:357,41,0	1/1:1,18:19:34.56:298,35,0	0/0:11,0:10:24.80:0,25,206	1/1:10,5:15:29.95:255,30,0	1/1:2,10:10:18.03:176,18,0	1/1:1,16:17:17.75:145,18,0	1/1:11,3:12:12.65:181,13,0	1/1:25,13:33:33.12:462,33,0	0/1:21,4:19:3.78:70,0,4	1/1:2,13:15:39.49:328,39,0	1/1:5,15:21:41.99:359,42,0	1/1:2,15:16:14.98:145,15,0	1/1:5,7:12:32.22:278,32,0	0/0:11,0:11:24.58:0,25,221	0/0:17,0:16:23.50:0,24,235	0/1:3,10:13:23.76:126,0,24	1/1:1,23:24:62.53:546,63,0	1/1:1,12:12:17.83:179,18,0	0/1:1,8:9:2.57:77,0,3
chr10	35911642	.	T	TA	4498.89	PASS	AB=0.899;AC=33;AF=0.589;AN=56;BaseQRankSum=-1.798;DP=490;FS=0.870;HRun=0;HaplotypeScore=75.7275;InbreedingCoeff=0.7243;MQ=54.24;MQ0=30;MQRankSum=3.842;QD=14.51;ReadPosRankSum=3.675;VQSLOD=6.4252;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:22:36.92:0,37,243	1/1:8,0:8:4.98:72,5,0	0/0:20,0:8:17.21:0,17,164	0/0:9,0:3:6.01:0,6,59	0/0:23,0:22:47.79:0,48,298	1/1:16,0:15:34.14:300,34,0	1/1:17,0:15:29.07:249,29,0	1/1:25,0:24:45.37:540,45,0	0/0:7,0:7:14.31:0,14,85	1/1:20,0:17:43.52:373,44,0	1/1:21,0:19:34.04:269,34,0	0/0:11,0:10:23.75:0,24,187	1/1:14,0:14:23.50:221,23,0	1/1:15,0:13:3.40:178,3,0	1/1:19,0:18:23.04:180,23,0	0/0:17,0:15:39.58:0,40,302	0/0:39,0:33:74.35:0,74,528	0/1:17,13:23:39.06:51,0,39	1/1:16,0:16:40.65:349,41,0	1/1:22,0:22:47.97:441,48,0	1/1:18,0:17:16.80:156,17,0	1/1:11,0:11:11.37:199,11,0	0/0:11,0:11:29.46:0,29,237	0/0:18,0:17:24.10:0,24,262	0/1:13,0:13:33.46:126,0,33	1/1:24,0:24:62.47:544,62,0	1/1:12,0:11:19.53:174,20,0	0/1:9,0:9:6.50:77,0,6
chr10	35912441	.	A	AT	11430.80	PASS	AB=0.978;AC=48;AF=0.857;AN=56;BaseQRankSum=-6.741;DP=594;FS=5.254;HRun=10;HaplotypeScore=62.3730;InbreedingCoeff=0.7392;MQ=78.40;MQ0=1;MQRankSum=-0.688;QD=20.67;ReadPosRankSum=2.255;VQSLOD=6.0117;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,2:36:88.47:477,88,0	1/1:1,6:7:15.04:160,15,0	0/1:20,0:16:1.90:2,0,105	0/1:19,0:16:25.67:26,0,57	1/1:1,18:19:48.05:497,48,0	1/1:1,23:24:48.12:511,48,0	1/1:2,16:18:39.10:416,39,0	1/1:12,28:40:90:915,90,0	1/1:3,12:16:18.82:334,19,0	1/1:3,20:24:62.99:653,63,0	1/1:6,19:26:53.93:544,54,0	0/0:9,0:9:23.97:0,24,196	1/1:2,24:26:63.16:671,63,0	1/1:6,19:25:41.61:429,42,0	1/1:3,19:22:54.14:576,54,0	1/1:2,17:19:42.11:448,42,0	1/1:4,22:26:4.88:463,5,0	1/1:2,20:22:54.14:575,54,0	1/1:6,19:25:35.49:575,35,0	1/1:3,18:22:56.91:564,57,0	1/1:2,8:10:21.05:224,21,0	1/1:3,12:16:29.91:302,30,0	0/0:22,0:22:53.93:0,54,443	0/0:10,0:10:29.96:0,30,246	1/1:0,21:21:51.13:544,51,0	1/1:7,22:30:46.58:665,47,0	1/1:2,24:28:62.83:636,63,0	1/1:0,9:9:21.05:224,21,0
chr10	35913245	.	T	TA	2406.08	PASS	AB=0.741;AC=30;AF=0.556;AN=54;BaseQRankSum=-5.025;DP=446;FS=0.535;HRun=15;HaplotypeScore=50.3315;InbreedingCoeff=0.4056;MQ=51.18;MQ0=16;MQRankSum=-1.021;QD=6.99;ReadPosRankSum=-1.110;VQSLOD=1.9470;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:2,0:17:18.28:0,18,53	0/1:3,6:8:18.08:76,0,18	0/1:14,0:4:2.50:2,0,13	0/0:9,0:4:5.30:0,5,27	0/1:24,2:28:23.24:23,0,84	1/1:8,11:19:14.98:126,15,0	1/1:5,4:8:8.99:76,9,0	1/1:13,22:36:19.27:400,19,0	0/0:10,0:10:8.72:0,9,52	1/1:6,6:12:11.99:101,12,0	0/1:16,10:25:21.85:118,0,22	0/0:10,0:10:8.64:0,9,54	1/1:3,7:10:11.99:101,12,0	1/1:9,4:13:10.24:79,10,0	0/1:6,3:10:3.19:75,0,3	0/0:18,0:18:16.92:0,17,185	0/0:21,0:21:20.79:0,21,180	1/1:8,15:20:32.96:277,33,0	1/1:12,17:29:32.95:274,33,0	0/1:4,6:10:0.38:74,0,0	0/1:3,7:10:6.03:64,0,6	./.	0/0:9,1:10:20.49:0,20,125	0/0:5,0:5:8.75:0,9,54	1/1:3,9:12:2.96:133,3,0	1/1:12,12:23:32.92:271,33,0	1/1:7,21:27:22.13:280,22,0	0/1:9,4:12:12.38:40,0,12
chr10	35913677	.	CTT	C	3676.46	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=14.722;DP=647;FS=16.472;HRun=3;HaplotypeScore=103.1733;InbreedingCoeff=0.9976;MQ=74.73;MQ0=0;MQRankSum=-14.108;QD=37.14;ReadPosRankSum=2.724;VQSLOD=2.5201;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,102,1927	0/0:11,0:11:33.11:0,33,631	0/0:21,0:21:61.45:0,61,1123	0/0:19,0:19:51.17:0,51,951	1/1:3,13:16:41.91:550,42,0	0/0:19,0:19:57.20:0,57,1086	0/0:21,0:21:60.18:0,60,1081	0/0:33,0:33:96.32:0,96,1812	1/1:3,16:19:54.17:731,54,0	0/0:24,0:24:72.25:0,72,1383	0/0:18,0:18:42.14:0,42,793	0/0:22,0:22:66.22:0,66,1223	0/0:28,0:28:84.29:0,84,1585	0/0:28,0:28:81.28:0,81,1523	0/0:32,0:32:96.32:0,96,1822	1/1:3,34:37:99:1443,105,0	1/1:4,23:27:69.23:952,69,0	0/0:20,0:20:60.21:0,60,1131	0/0:28,0:28:84.29:0,84,1610	0/0:14,0:14:42.14:0,42,811	0/0:37,0:37:99:0,111,2123	0/0:17,0:17:51.17:0,51,979	0/0:14,0:14:39.13:0,39,754	0/0:30,0:30:90.29:0,90,1705	0/0:20,0:20:57.20:0,57,1094	0/0:27,0:27:81.26:0,81,1531	0/0:24,0:24:72.24:0,72,1353	0/0:6,0:6:18.06:0,18,345
chr10	35913683	.	GGGAC	G	4879.81	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=14.930;DP=637;FS=13.117;HRun=0;HaplotypeScore=121.5338;InbreedingCoeff=0.9977;MQ=78.81;MQ0=0;MQRankSum=-14.430;QD=55.45;ReadPosRankSum=3.196;VQSLOD=6.0602;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,108,3060	0/0:12,0:12:36.12:0,36,966	0/0:25,0:25:70.26:0,70,1874	0/0:20,0:20:57.19:0,57,1439	1/1:1,13:14:42.14:778,42,0	0/0:20,0:20:60.20:0,60,1619	0/0:18,0:18:51.18:0,51,1477	0/0:34,0:34:99:0,102,2848	1/1:0,16:16:48.16:901,48,0	0/0:24,0:24:72.25:0,72,2040	0/0:14,0:14:42.14:0,42,1217	0/0:23,0:23:69.23:0,69,1862	0/0:25,0:25:75.26:0,75,2173	0/0:25,0:25:72.25:0,72,2020	0/0:33,0:33:99:0,99,2846	1/1:0,34:34:99:1936,102,0	1/1:1,23:24:66.23:1265,66,0	0/0:19,0:19:57.20:0,57,1651	0/0:28,0:28:84.29:0,84,2261	0/0:14,0:14:42.14:0,42,1208	0/0:35,0:35:99:0,105,3005	0/0:16,0:16:48.16:0,48,1349	0/0:15,0:15:42.14:0,42,1216	0/0:32,0:32:96.33:0,96,2682	0/0:23,0:23:69.22:0,69,1880	0/0:28,0:28:84.28:0,84,2332	0/0:23,0:23:69.24:0,69,1951	0/0:6,0:6:18.06:0,18,521
chr10	35914588	.	CA	C	17086.85	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=7.065;DP=580;FS=3.729;HRun=1;HaplotypeScore=60.2526;InbreedingCoeff=0.9920;MQ=85.97;MQ0=0;MQRankSum=-5.638;QD=38.83;ReadPosRankSum=2.601;VQSLOD=5.6057;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:93.32:0,93,1486	1/1:0,7:7:12.04:168,12,0	0/0:22,0:22:66.23:0,66,1053	0/0:19,0:19:57.12:0,57,816	1/1:0,22:22:57.12:771,57,0	1/1:0,20:20:45.15:629,45,0	1/1:0,22:22:60.20:839,60,0	1/1:0,16:16:48.12:633,48,0	1/1:0,18:18:54.18:755,54,0	1/1:0,16:16:48.16:669,48,0	1/1:0,13:13:39.13:545,39,0	0/0:29,0:29:87.28:0,87,1362	1/1:0,23:23:66.22:922,66,0	1/1:0,20:20:60.20:839,60,0	1/1:0,16:16:48.16:671,48,0	1/1:0,16:16:42.11:587,42,0	1/1:0,46:46:99:1720,123,0	1/1:0,23:23:63.21:881,63,0	1/1:0,12:12:36.12:503,36,0	1/1:0,24:24:63.21:880,63,0	1/1:0,43:43:99:1718,123,0	1/1:0,7:7:21.07:293,21,0	0/0:13,0:13:33.11:0,33,527	0/0:26,0:26:78.27:0,78,1240	1/1:0,21:21:63.21:881,63,0	1/1:0,23:23:66.22:923,66,0	1/1:0,23:23:69.23:964,69,0	1/1:0,9:9:21.07:294,21,0
chr10	35915512	.	ATCCGAGG	A	24824.16	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=18.771;DP=735;FS=5.904;HRun=0;HaplotypeScore=186.3439;InbreedingCoeff=0.9873;MQ=77.91;MQ0=0;MQRankSum=-18.557;QD=57.87;ReadPosRankSum=3.019;VQSLOD=4.2195;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,123,4815	1/1:1,16:17:45.11:1109,45,0	0/0:29,0:29:49.08:0,49,3043	0/0:17,0:17:39.88:0,40,1340	0/0:28,0:28:75.26:0,75,2831	1/1:1,26:27:63.22:1634,63,0	1/1:8,30:38:72.25:1866,72,0	1/1:5,25:30:75.19:1550,75,0	0/0:33,0:33:90.30:0,90,3388	1/1:3,22:25:63.22:1624,63,0	1/1:1,14:15:18.06:467,18,0	0/0:36,0:36:99:0,105,4083	1/1:3,20:23:57.20:1478,57,0	1/1:3,26:30:69.24:1789,69,0	1/1:1,46:47:99:3034,117,0	0/0:50,0:50:99:0,138,5319	0/0:20,0:20:60.19:0,60,2251	1/1:2,10:12:15.05:384,15,0	1/1:4,12:16:36.10:799,36,0	1/1:1,20:21:54.19:1391,54,0	1/1:4,8:12:12.04:311,12,0	1/1:1,28:29:69.24:1779,69,0	0/0:24,0:24:69.24:0,69,2744	0/0:23,0:23:66.23:0,66,2541	1/1:0,18:18:45.15:1167,45,0	1/1:4,28:32:87.29:2112,87,0	1/1:4,27:31:78.27:2020,78,0	1/1:1,5:6:12.04:311,12,0
chr10	35916921	.	AAG	A	643.48	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.475;DP=508;FS=4.270;HRun=0;HaplotypeScore=94.5619;InbreedingCoeff=0.9513;MQ=65.35;MQ0=0;MQRankSum=-1.785;QD=29.25;ReadPosRankSum=-0.498;VQSLOD=4.7151;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,16:22:60.07:738,60,0	0/0:5,0:5:15.04:0,15,224	0/0:5,0:4:12.02:0,12,165	0/0:9,0:9:20.93:0,21,238	0/0:16,0:16:48.08:0,48,715	0/0:22,0:22:66.23:0,66,1107	0/0:16,0:16:48.07:0,48,722	0/0:28,0:28:78.24:0,78,1239	0/0:16,0:16:48.15:0,48,781	0/0:24,0:24:72.13:0,72,1052	0/0:22,0:22:63.14:0,63,977	0/0:17,0:17:51.15:0,51,839	0/0:18,0:18:54.17:0,54,844	0/0:17,0:17:51.16:0,51,808	0/0:24,0:24:72.23:0,72,1146	0/0:25,0:25:75.16:0,75,1170	0/0:15,0:15:45.07:0,45,671	0/0:27,0:27:75.16:0,75,1125	0/0:22,0:22:63.15:0,63,939	0/0:20,0:20:41.99:0,42,851	0/0:14,0:14:39.02:0,39,550	0/0:12,0:12:36.10:0,36,552	0/0:14,0:14:42.13:0,42,682	0/0:15,0:15:45.07:0,45,643	0/0:13,0:13:39.13:0,39,655	0/0:30,0:30:89.93:0,90,1347	0/0:24,0:24:64.36:0,64,965	0/0:15,0:15:39.09:0,39,604
chr10	35917065	.	G	GA	14066.83	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=5.168;DP=560;FS=10.355;HRun=7;HaplotypeScore=76.1615;InbreedingCoeff=0.9581;MQ=79.54;MQ0=0;MQRankSum=-1.868;QD=29.49;ReadPosRankSum=2.053;VQSLOD=5.0455;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,28:31:72.22:870,72,0	1/1:0,6:6:15.05:181,15,0	0/0:13,0:13:28.29:0,28,264	0/0:11,0:12:18.93:0,19,224	1/1:1,15:16:42.09:491,42,0	1/1:5,22:27:60.18:725,60,0	1/1:2,13:15:39.12:471,39,0	1/1:6,18:24:54.15:641,54,0	1/1:2,13:15:30.09:362,30,0	1/1:3,29:32:90.24:1053,90,0	1/1:4,18:22:51.05:579,51,0	0/0:20,0:20:60.10:0,60,579	1/1:2,20:22:54.17:652,54,0	1/1:0,23:23:57.17:689,57,0	1/1:1,21:22:45.14:543,45,0	1/1:2,28:30:72.15:870,72,0	1/1:2,18:20:54.17:652,54,0	1/1:3,16:19:42.13:507,42,0	1/1:4,21:26:72.02:798,72,0	1/1:1,14:15:42.04:474,42,0	1/1:0,7:7:18.06:217,18,0	1/1:2,10:13:4.12:332,4,0	0/0:16,0:16:44.99:0,45,417	0/0:21,1:22:20.81:0,21,485	1/1:2,15:17:42.13:507,42,0	1/1:4,34:38:99:1219,102,0	1/1:1,27:28:78.24:941,78,0	1/1:1,8:9:24.07:290,24,0
chr10	35917165	.	A	AT	2330.32	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-7.492;DP=622;FS=5.911;HRun=8;HaplotypeScore=102.5199;InbreedingCoeff=0.9622;MQ=73.75;MQ0=0;MQRankSum=-0.504;QD=25.89;ReadPosRankSum=0.333;VQSLOD=3.5280;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:53.76:0,54,661	0/0:9,0:9:27.01:0,27,247	0/0:26,0:22:20.36:0,20,358	0/0:18,0:17:4.74:0,5,153	1/1:3,18:21:48.09:529,48,0	0/0:22,0:22:54.01:0,54,489	0/0:19,0:19:51.01:0,51,462	0/0:29,0:29:63.01:0,63,569	1/1:2,9:11:33.09:371,33,0	0/0:30,0:30:78.03:0,78,709	0/0:14,0:14:30.01:0,30,274	0/0:39,0:39:99:0,105,956	0/0:15,0:15:35.98:0,36,319	0/0:22,0:22:62.99:0,63,568	0/0:28,0:28:75.02:0,75,686	1/1:8,18:26:60.18:691,60,0	1/1:0,32:32:78.23:900,78,0	0/0:15,0:15:42.02:0,42,384	0/0:23,0:23:41.96:0,42,376	0/0:18,0:17:48.01:0,48,435	0/0:24,0:24:66.03:0,66,604	0/0:18,0:18:51.03:0,51,466	0/0:24,0:24:57:0,57,517	0/0:30,0:30:84.05:0,84,768	0/0:17,0:17:39.01:0,39,356	0/0:26,0:26:68.98:0,69,620	0/0:25,0:25:63.03:0,63,576	0/0:11,0:11:27:0,27,247
chr10	35917278	.	ACT	A	3665.74	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=10.442;DP=682;FS=16.511;HRun=0;HaplotypeScore=90.1650;InbreedingCoeff=0.9900;MQ=74.74;MQ0=0;MQRankSum=0.966;QD=36.29;ReadPosRankSum=4.064;VQSLOD=4.8335;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,123,2250	0/0:6,0:6:12.04:0,12,225	0/0:18,0:16:48.15:0,48,803	0/0:25,1:22:43.46:0,43,585	1/1:1,11:12:27.09:398,27,0	0/0:24,0:24:63.22:0,63,1171	0/0:27,0:27:78.27:0,78,1431	0/0:32,0:32:93.31:0,93,1678	1/1:0,15:15:32.84:485,33,0	0/0:18,0:18:54.19:0,54,1010	0/0:20,0:20:60.21:0,60,1123	0/0:37,0:37:93.31:0,93,1704	0/0:17,0:17:48.15:0,48,854	0/0:25,0:25:66.23:0,66,1220	0/0:23,0:23:63.22:0,63,1172	1/1:1,34:35:84.28:1237,84,0	1/1:1,38:39:99:1546,105,0	0/0:15,0:15:45.15:0,45,841	0/0:22,0:22:57.18:0,57,1001	0/0:16,0:16:45.14:0,45,811	0/0:70,0:70:99:0,205,3704	0/0:7,0:7:21.07:0,21,390	0/0:15,0:15:45.14:0,45,799	0/0:53,0:53:99:0,160,2877	0/0:16,0:16:48.13:0,48,835	0/0:17,0:17:51.17:0,51,927	0/0:14,0:14:39.13:0,39,722	0/0:20,0:20:60.21:0,60,1123
chr10	35917426	.	G	GC	19328.66	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-11.999;DP=543;FS=13.594;HRun=0;HaplotypeScore=51.4083;InbreedingCoeff=0.9922;MQ=94.07;MQ0=0;MQRankSum=-8.199;QD=44.23;ReadPosRankSum=3.659;VQSLOD=3.8949;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,27:26:75.26:1198,75,0	1/1:0,4:4:12.04:192,12,0	0/0:28,0:28:78.25:0,78,1072	0/0:25,0:25:68.99:0,69,918	1/1:0,16:16:48.16:767,48,0	1/1:1,21:22:60.20:959,60,0	1/1:0,19:19:51.17:815,51,0	1/1:1,31:31:87.26:1344,87,0	1/1:0,9:9:24.08:383,24,0	1/1:0,21:21:63.17:979,63,0	1/1:0,17:17:51.17:815,51,0	0/0:23,0:23:66.19:0,66,889	1/1:0,16:16:45.15:719,45,0	1/1:0,16:16:45.15:720,45,0	1/1:0,12:12:36.12:575,36,0	1/1:0,14:14:36.12:575,36,0	1/1:6,21:27:72.23:1127,72,0	1/1:0,27:27:75.26:1199,75,0	1/1:0,16:17:48.14:743,48,0	1/1:0,14:14:39.13:624,39,0	1/1:0,31:31:87.30:1389,87,0	1/1:0,19:19:51.17:815,51,0	0/0:12,0:12:33.11:0,33,460	0/0:18,0:18:51.17:0,51,713	1/1:0,19:19:51.17:815,51,0	1/1:1,26:27:78.27:1231,78,0	1/1:1,18:18:48.16:767,48,0	1/1:0,12:12:36.12:575,36,0
chr10	35917538	.	AAAAAAAAAAG	A	1915.29	PASS	AB=0.585;AC=7;AF=0.125;AN=56;BaseQRankSum=3.910;DP=492;FS=0.000;HRun=0;HaplotypeScore=132.6908;InbreedingCoeff=0.7199;MQ=52.46;MQ0=33;MQRankSum=-5.353;QD=23.94;ReadPosRankSum=4.649;VQSLOD=2.7843;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:18:29.46:0,29,1131	0/0:12,0:12:12.61:0,13,215	0/0:41,0:9:18.56:0,19,353	0/0:14,0:2:3.01:0,3,81	1/1:4,17:21:44.45:723,44,0	0/0:17,0:16:29.71:0,30,308	0/0:17,0:15:23.34:0,23,486	0/0:32,0:30:75.81:0,76,953	1/1:8,7:15:35.56:642,36,0	0/0:19,0:19:34.09:0,34,529	0/0:11,0:11:32.99:0,33,468	0/0:13,0:13:33.07:0,33,903	0/0:12,0:11:18.08:0,18,201	0/0:12,0:12:17.89:0,18,191	0/0:11,0:10:17.98:0,18,203	1/1:2,18:19:13.90:402,14,0	0/1:7,17:24:99:294,0,104	0/0:14,0:13:33.02:0,33,551	0/0:22,0:22:47.92:0,48,688	0/0:17,0:16:35.85:0,36,433	0/0:3,0:3:3.01:0,3,58	0/0:16,0:15:18.98:0,19,371	0/0:22,0:20:55.58:0,56,1842	0/0:16,0:14:30.05:0,30,1107	0/0:18,0:18:31.32:0,31,542	0/0:19,0:18:48.03:0,48,696	0/0:19,0:17:15.05:0,15,480	0/0:11,0:10:20.51:0,21,260
chr10	35917542	.	AAAAAAG	A	2754.32	PASS	AB=0.984;AC=24;AF=0.429;AN=56;BaseQRankSum=12.335;DP=480;FS=0.000;HRun=0;HaplotypeScore=96.8061;InbreedingCoeff=-0.2279;MQ=57.36;MQ0=32;MQRankSum=-7.326;QD=8.45;ReadPosRankSum=10.093;VQSLOD=0.3482;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:18:27.56:0,28,613	0/1:13,0:13:53.15:167,0,53	0/0:44,0:12:5.25:0,5,169	0/0:14,0:2:3.01:0,3,39	1/1:18,0:18:47.77:487,48,0	0/1:17,1:17:99:109,0,155	0/1:16,1:15:67.70:68,0,144	0/1:31,0:30:99:210,0,291	1/1:16,0:16:41.89:446,42,0	0/1:19,0:19:69.85:188,0,70	0/1:11,0:11:3.28:3,0,133	0/0:13,0:13:20.02:0,20,340	0/1:10,0:9:27.42:73,0,27	0/1:11,0:11:74.95:90,0,75	0/1:11,0:10:31.47:87,0,31	1/1:18,0:17:14.31:220,14,0	0/1:19,0:19:51.07:162,0,51	0/1:13,0:12:27.37:27,0,102	0/1:18,4:22:53.58:54,0,252	0/1:16,0:15:77.36:77,0,86	0/0:5,0:5:8.93:0,9,67	0/1:15,0:14:97.63:133,0,98	0/0:23,0:21:46.68:0,47,920	0/0:16,0:14:26.97:0,27,611	0/0:15,0:15:0.43:0,0,143	0/1:18,0:17:99:100,0,167	0/1:20,0:18:65.23:134,0,65	1/1:10,0:9:10.65:91,11,0
chr10	35918381	.	AT	A	17912.23	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=9.017;DP=620;FS=1.950;HRun=3;HaplotypeScore=94.5944;InbreedingCoeff=0.9997;MQ=76.08;MQ0=0;MQRankSum=-3.314;QD=34.18;ReadPosRankSum=3.670;VQSLOD=5.2127;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,49:50:99:1673,135,0	1/1:0,15:15:45.14:558,45,0	0/0:14,0:13:36.09:0,36,456	0/0:18,0:18:38.61:0,39,484	1/1:0,30:30:90.21:1082,90,0	1/1:0,24:24:66.21:818,66,0	1/1:0,20:20:54.17:669,54,0	1/1:2,33:35:99:1216,99,0	1/1:3,17:20:48.15:595,48,0	1/1:0,25:25:75.20:903,75,0	1/1:0,21:21:57.18:707,57,0	0/0:19,0:19:54.18:0,54,776	1/1:1,21:22:60.19:744,60,0	1/1:2,10:12:30.09:371,30,0	1/1:0,22:22:60.19:743,60,0	1/1:1,21:22:51.16:632,51,0	1/1:0,12:12:36.11:446,36,0	1/1:0,13:13:36.11:446,36,0	1/1:2,27:29:81.25:1004,81,0	1/1:0,21:21:63.20:781,63,0	1/1:0,14:14:39.12:483,39,0	1/1:1,14:15:39.12:483,39,0	0/0:25,0:25:69.23:0,69,993	0/0:20,0:20:60.05:0,60,757	1/1:1,26:27:78.25:967,78,0	1/1:0,18:18:54.16:658,54,0	1/1:0,33:33:90.28:1115,90,0	1/1:1,23:24:66.21:818,66,0
chr10	35918957	.	A	AC	31342.25	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=7.919;DP=831;FS=6.972;HRun=0;HaplotypeScore=137.5253;InbreedingCoeff=0.9997;MQ=84.79;MQ0=0;MQRankSum=-6.846;QD=44.65;ReadPosRankSum=3.685;VQSLOD=3.4869;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,41:42:99:1915,120,0	1/1:0,9:9:27.09:427,27,0	0/0:24,0:24:38.86:0,39,802	0/0:27,0:27:56.62:0,57,965	1/1:0,32:32:93.32:1485,93,0	1/1:0,39:39:99:1820,114,0	1/1:1,24:25:72.18:1120,72,0	1/1:3,47:50:99:2172,147,0	1/1:1,24:25:69.24:1099,69,0	1/1:1,34:35:99:1628,102,0	1/1:0,37:37:99:1580,99,0	0/0:23,0:23:69.23:0,69,964	1/1:0,31:31:87.30:1375,87,0	1/1:0,40:40:99:1915,120,0	1/1:1,40:41:99:1819,114,0	1/1:0,37:37:99:1581,99,0	1/1:2,15:17:42.14:671,42,0	1/1:0,17:17:45.15:718,45,0	1/1:0,21:21:63.21:997,63,0	1/1:0,33:33:93.32:1483,93,0	1/1:0,19:19:54.18:862,54,0	1/1:3,31:34:81.17:1262,81,0	0/0:35,0:35:99:0,105,1451	0/0:20,0:20:60.18:0,60,820	1/1:0,32:32:96.33:1533,96,0	1/1:0,28:28:84.29:1340,84,0	1/1:0,45:44:99:1916,120,0	1/1:0,13:13:39.13:623,39,0
chr10	35919739	.	GACC	G	23636.87	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=13.266;DP=727;FS=1.192;HRun=0;HaplotypeScore=159.7548;InbreedingCoeff=0.9988;MQ=69.24;MQ0=0;MQRankSum=-5.774;QD=39.73;ReadPosRankSum=2.778;VQSLOD=6.0157;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,34:39:99:1486,99,0	1/1:1,10:11:27.09:428,27,0	0/0:17,0:17:39.59:0,40,729	0/0:17,0:16:35.86:0,36,701	1/1:7,22:29:75.23:1122,75,0	1/1:2,27:29:75.26:1180,75,0	1/1:2,14:16:30.10:467,30,0	1/1:6,28:34:81.24:1227,81,0	1/1:5,26:31:75.26:1180,75,0	1/1:2,23:25:69.20:1039,69,0	1/1:1,18:19:54.14:828,54,0	0/0:38,0:38:99:0,111,2396	1/1:3,36:39:93.32:1458,93,0	1/1:1,29:30:81.28:1276,81,0	1/1:0,41:41:99:1748,111,0	1/1:5,30:35:99:1514,99,0	1/1:7,29:36:96.31:1477,96,0	1/1:2,30:32:78.27:1237,78,0	1/1:6,9:15:24.06:356,24,0	1/1:5,18:23:60.20:941,60,0	1/1:1,16:17:42.14:666,42,0	1/1:2,24:26:72.24:1131,72,0	0/0:24,0:24:72.18:0,72,1384	0/0:36,0:36:99:0,99,2058	1/1:0,15:15:36.12:570,36,0	1/1:1,24:25:72.24:1127,72,0	1/1:1,17:18:48.16:751,48,0	1/1:0,9:9:27.09:428,27,0
chr10	35919744	.	CCA	C	9081.51	PASS	AB=1.000;AC=42;AF=0.750;AN=56;BaseQRankSum=16.770;DP=716;FS=3.429;HRun=0;HaplotypeScore=194.9663;InbreedingCoeff=0.5834;MQ=68.70;MQ0=0;MQRankSum=-3.904;QD=15.50;ReadPosRankSum=6.014;VQSLOD=4.8547;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:40,0:39:68.57:555,69,0	1/1:11,0:11:25.90:139,26,0	0/0:16,0:16:39.59:0,40,648	0/0:17,0:16:31.76:0,32,609	1/1:28,2:30:64.95:772,65,0	0/1:30,0:30:14.69:306,0,15	0/1:17,0:17:29.22:122,0,29	0/1:31,0:31:17.56:324,0,18	1/1:26,1:27:74.70:750,75,0	1/1:25,0:25:38.06:343,38,0	1/1:18,1:19:51.95:284,52,0	0/0:39,0:39:99:0,117,2118	1/1:39,3:42:5.16:391,5,0	1/1:30,0:30:48.64:386,49,0	1/1:43,0:43:47.92:496,48,0	1/1:34,0:34:98.87:991,99,0	1/1:34,0:34:78.52:969,79,0	1/1:30,0:30:74.75:399,75,0	0/1:11,0:11:35.03:101,0,35	1/1:20,1:21:57.84:326,58,0	1/1:17,0:17:11.13:182,11,0	1/1:24,1:25:69.17:373,69,0	0/0:24,0:24:72.18:0,72,1195	0/0:34,0:34:99:0,102,1832	1/1:16,0:16:5.75:152,6,0	1/1:25,0:25:39.51:332,40,0	1/1:19,0:19:46.14:250,46,0	1/1:9,0:9:25.88:138,26,0
chr10	35919753	.	T	TA	3830.27	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-4.789;DP=747;FS=1.690;HRun=8;HaplotypeScore=208.1298;InbreedingCoeff=0.9986;MQ=66.46;MQ0=0;MQRankSum=0.963;QD=29.02;ReadPosRankSum=1.158;VQSLOD=0.9679;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:41:53.60:0,54,163	0/0:11,0:11:27.01:0,27,247	0/0:14,0:15:22.78:0,23,170	0/0:15,0:14:29.60:0,30,251	1/1:3,27:30:81.15:905,81,0	0/0:32,0:32:86.98:0,87,780	0/0:17,0:17:39:0,39,351	0/0:37,0:37:96.02:0,96,866	1/1:9,21:30:53.72:848,54,0	0/0:24,0:24:63.03:0,63,573	0/0:21,0:21:48:0,48,431	0/0:41,0:41:99:0,108,988	0/0:40,0:40:96.02:0,96,868	0/0:31,0:31:66.03:0,66,602	0/0:46,0:46:99:0,105,949	1/1:3,33:36:90.20:1014,90,0	1/1:2,34:36:93.27:1063,93,0	0/0:33,0:33:80.97:0,81,726	0/0:13,0:13:35.97:0,36,317	0/0:22,0:22:48.02:0,48,438	0/0:18,0:18:51.03:0,51,466	0/0:29,0:29:65.97:0,66,592	0/0:21,0:21:51:0,51,463	0/0:35,0:35:93.03:0,93,846	0/0:16,0:16:39.02:0,39,356	0/0:26,0:26:60.01:0,60,544	0/0:20,0:20:45.02:0,45,411	0/0:10,0:10:30.01:0,30,271
chr10	35920679	.	G	GA	13194.04	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-7.038;DP=541;FS=13.140;HRun=7;HaplotypeScore=57.1355;InbreedingCoeff=0.9713;MQ=81.72;MQ0=0;MQRankSum=-4.117;QD=29.00;ReadPosRankSum=2.056;VQSLOD=4.5226;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,36:39:81.25:978,81,0	1/1:0,8:8:12.03:145,12,0	0/0:14,0:14:35.98:0,36,330	0/0:18,0:18:34.99:0,35,310	1/1:2,12:14:39.08:447,39,0	1/1:1,28:29:63.19:760,63,0	1/1:2,22:24:48.13:568,48,0	1/1:5,19:24:54.15:640,54,0	1/1:2,10:12:30.09:360,30,0	1/1:0,17:17:51.14:600,51,0	1/1:1,14:15:45.14:539,45,0	0/0:19,0:19:45.04:0,45,427	1/1:2,17:19:48.15:580,48,0	1/1:1,27:28:69.21:834,69,0	1/1:1,16:17:48.15:580,48,0	1/1:0,21:21:51.11:597,51,0	1/1:5,27:32:72.22:861,72,0	1/1:3,18:21:51.16:616,51,0	1/1:3,11:14:7.06:330,7,0	1/1:3,7:10:21.02:237,21,0	1/1:2,20:22:54.17:652,54,0	1/1:0,16:16:48.15:580,48,0	0/0:12,0:12:30.05:0,30,289	0/0:23,0:23:60.02:0,60,559	1/1:2,13:15:36.11:435,36,0	1/1:4,16:20:22.18:551,22,0	1/1:0,23:23:63.19:761,63,0	1/1:0,15:15:45.14:544,45,0
chr10	35921601	.	CGGGCGGGGCG	C	2392.06	PASS	AB=1.000;AC=25;AF=0.658;AN=38;BaseQRankSum=1.283;DP=177;FS=4.297;HRun=0;HaplotypeScore=56.5043;InbreedingCoeff=0.5155;MQ=76.65;MQ0=0;MQRankSum=-3.992;QD=21.17;ReadPosRankSum=1.212;VQSLOD=1.6343;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,4:10:6.02:185,6,0	1/1:1,4:5:6.02:175,6,0	0/1:12,0:8:9.61:10,0,33	0/0:24,0:7:6.84:0,7,98	./.	./.	1/1:8,13:21:30.10:915,30,0	1/1:2,4:6:9.88:127,10,0	0/0:1,0:3:3.01:0,3,31	./.	./.	0/0:3,0:3:6.02:0,6,112	./.	1/1:3,2:5:3.01:92,3,0	1/1:4,1:5:6.02:185,6,0	./.	0/0:9,0:13:14.88:0,15,166	1/1:5,7:12:11.95:370,12,0	1/1:2,0:2:3.01:54,3,0	0/0:1,0:1:0:0,0,0	1/1:8,15:23:8.75:120,9,0	./.	./.	0/0:4,0:4:9.03:0,9,263	1/1:0,2:2:5.97:56,6,0	1/1:3,3:6:6.88:53,7,0	1/1:1,3:4:6.02:185,6,0	./.
chr10	35922069	.	AC	A	16116.93	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=5.595;DP=560;FS=7.830;HRun=3;HaplotypeScore=55.8617;InbreedingCoeff=0.9893;MQ=84.46;MQ0=0;MQRankSum=-5.584;QD=33.37;ReadPosRankSum=4.136;VQSLOD=5.0566;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,14:14:30.09:371,30,0	1/1:0,6:6:18.06:223,18,0	0/0:24,0:24:71.88:0,72,939	0/0:9,0:9:21.07:0,21,297	1/1:2,32:34:90.09:1058,90,0	1/1:1,38:39:99:1301,105,0	1/1:0,18:18:45.14:558,45,0	1/1:2,33:35:96.26:1144,96,0	1/1:0,20:20:57.18:706,57,0	1/1:0,29:29:87.18:1044,87,0	1/1:1,13:14:39.12:483,39,0	0/0:23,0:23:66.20:0,66,912	1/1:0,12:12:33.10:409,33,0	1/1:0,13:13:30.09:372,30,0	1/1:0,21:21:57.18:706,57,0	1/1:0,30:30:84.26:1041,84,0	1/1:0,17:17:48.15:594,48,0	1/1:0,16:16:45.14:557,45,0	1/1:1,19:20:57.12:646,57,0	1/1:0,25:25:75.13:894,75,0	1/1:0,19:19:48.15:595,48,0	1/1:0,11:11:30.05:354,30,0	0/0:16,0:16:48.14:0,48,654	0/0:5,0:5:12.04:0,12,173	1/1:0,20:20:57.18:706,57,0	1/1:1,27:28:78.22:942,78,0	1/1:0,31:31:87.27:1078,87,0	1/1:0,11:11:27.08:334,27,0
chr10	35922643	.	G	GTTTAGTC	32914.93	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-2.974;DP=631;FS=14.538;HRun=0;HaplotypeScore=213.9680;InbreedingCoeff=0.9303;MQ=78.38;MQ0=0;MQRankSum=-12.243;QD=65.57;ReadPosRankSum=1.227;VQSLOD=3.5154;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,5:12:4.39:512,4,0	1/1:3,10:13:26.75:1027,27,0	0/0:31,0:25:30.08:0,30,665	0/0:31,0:23:7.09:0,7,633	1/1:11,14:24:32.90:1235,33,0	1/1:10,16:26:54.19:1926,54,0	1/1:10,8:18:33.11:1173,33,0	1/1:26,7:33:57.11:1742,57,0	1/1:11,8:19:24.08:820,24,0	1/1:13,22:35:81.28:2902,81,0	1/1:3,10:13:27.09:967,27,0	0/0:23,0:23:51.63:0,52,1180	1/1:5,3:8:18.06:584,18,0	1/1:9,11:20:33.11:1258,33,0	1/1:12,18:30:54.19:2023,54,0	1/1:10,14:24:42.14:1583,42,0	1/1:12,5:17:15.05:572,15,0	1/1:5,3:8:15.05:554,15,0	1/1:15,7:22:42.14:1497,42,0	1/1:17,17:34:66.23:2327,66,0	1/1:4,4:8:12.04:399,12,0	1/1:16,18:34:66.23:2208,66,0	0/0:22,0:22:48.15:0,48,1112	0/0:19,0:19:45.15:0,45,1079	1/1:9,19:28:54.19:1984,54,0	1/1:8,21:29:69.19:2476,69,0	1/1:16,15:31:66.70:2343,67,0	1/1:5,9:14:21.07:802,21,0
chr10	35922666	.	T	TCTTTTTG	8547.08	PASS	AB=0.975;AC=29;AF=0.518;AN=56;BaseQRankSum=12.808;DP=698;FS=14.271;HRun=0;HaplotypeScore=421.0803;InbreedingCoeff=-0.2389;MQ=49.81;MQ0=3;MQRankSum=-4.910;QD=15.15;ReadPosRankSum=-0.004;VQSLOD=2.1749;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:17,0:17:99:187,0,100	0/1:12,0:12:17.03:180,0,17	0/0:38,0:15:28.43:0,28,396	0/0:22,0:8:4.59:0,5,99	1/1:30,0:29:4.77:534,5,0	1/1:23,0:24:9.85:487,10,0	0/1:19,0:19:21.84:197,0,22	0/1:44,0:43:76.07:579,0,76	1/1:21,0:21:14.87:548,15,0	0/1:39,0:39:65.56:452,0,66	1/1:24,0:24:13.23:500,13,0	0/0:28,0:28:76.34:0,76,1224	0/1:4,1:12:6.14:98,0,6	0/1:20,0:20:25.59:249,0,26	0/1:26,0:26:79.18:419,0,79	0/1:28,0:28:5.51:470,0,6	0/1:10,0:10:36.38:54,0,36	1/1:15,0:15:17.08:320,17,0	0/1:26,0:25:54.92:168,0,55	0/1:39,0:39:99:628,0,109	0/1:6,0:6:5.49:33,0,5	0/1:40,0:40:28.70:831,0,29	0/0:27,0:27:68.70:0,69,1093	0/0:19,0:19:51.10:0,51,774	1/1:43,0:43:3.54:893,4,0	0/1:34,0:35:26.16:561,0,26	0/1:26,0:26:99:143,0,157	0/1:8,0:8:16.39:16,0,43
chr10	35922672	.	T	TGTTTTTTTGTTTTTTTTTGTTTTTG	96549.99	PASS	AB=1.000;AC=47;AF=0.839;AN=56;BaseQRankSum=6.397;DP=688;FS=1.914;HRun=0;HaplotypeScore=485.7809;InbreedingCoeff=0.8093;MQ=51.91;MQ0=3;MQRankSum=-11.729;QD=165.33;ReadPosRankSum=9.767;VQSLOD=4.0752;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:16:31.53:2802,32,0	1/1:13,0:13:35.90:2311,36,0	0/0:39,0:16:28.66:0,29,465	0/0:22,0:8:3.17:0,3,126	1/1:28,0:32:63.80:3718,64,0	1/1:20,2:23:69.07:5431,69,0	1/1:19,0:19:56.90:2668,57,0	1/1:46,0:45:99:5708,124,0	1/1:15,0:21:57.26:3218,57,0	1/1:33,2:35:99:6885,105,0	1/1:22,1:24:71.64:4651,72,0	0/1:27,0:27:23.62:24,0,1262	1/1:8,1:10:12.04:1266,12,0	1/1:20,0:20:60.05:4474,60,0	1/1:18,4:22:57.44:4484,57,0	1/1:25,0:27:75.09:4655,75,0	1/1:8,0:8:23.96:1129,24,0	1/1:17,0:17:46:3276,46,0	1/1:21,0:21:58.03:3139,58,0	1/1:36,2:38:99:7343,111,0	1/1:6,0:6:17.89:777,18,0	1/1:36,2:38:99:8784,114,0	0/0:27,0:27:45.37:0,45,1183	0/0:16,0:16:48.10:0,48,939	1/1:39,4:43:99:7848,123,0	1/1:31,1:32:96.07:6109,96,0	1/1:16,2:37:58.61:3984,59,0	1/1:7,0:7:21.04:1863,21,0
chr10	35922673	.	T	TTTTTTTGTTTTTTTTGTTTTTG	70377.31	PASS	AB=1.000;AC=46;AF=0.821;AN=56;BaseQRankSum=10.222;DP=691;FS=6.018;HRun=0;HaplotypeScore=548.0619;InbreedingCoeff=0.7065;MQ=52.84;MQ0=3;MQRankSum=-11.778;QD=119.69;ReadPosRankSum=12.478;VQSLOD=3.3655;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:17:42.41:2538,42,0	1/1:13,0:13:8.07:1563,8,0	0/0:40,0:17:21.01:0,21,467	0/0:21,0:8:13.67:0,14,129	1/1:28,5:32:87.04:4123,87,0	1/1:23,0:23:49.21:3706,49,0	1/1:19,0:19:17.32:1677,17,0	1/1:49,0:48:52.50:3425,52,0	1/1:16,5:21:45.21:3619,45,0	1/1:35,0:35:67.17:4593,67,0	1/1:24,0:24:6.41:3075,6,0	0/1:26,0:26:29.42:29,0,1017	1/1:10,0:10:12.04:938,12,0	1/1:20,0:20:41.78:3101,42,0	1/1:22,0:22:58.16:3037,58,0	1/1:25,2:27:68.90:4929,69,0	1/1:8,0:8:20.82:1136,21,0	0/1:18,0:18:0.13:2093,0,0	1/1:23,0:22:37.73:2057,38,0	1/1:38,0:38:86.36:4974,86,0	1/1:6,0:6:0.97:469,1,0	1/1:38,0:38:94.70:5952,95,0	0/0:27,0:27:26.19:0,26,920	0/0:15,0:15:36:0,36,739	1/1:43,0:43:64.86:5130,65,0	1/1:34,0:34:86.47:4081,86,0	1/1:34,0:34:27.13:2806,27,0	1/1:7,0:7:11.19:1325,11,0
chr10	35924514	.	C	CT	12076.53	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-10.340;DP=482;FS=3.865;HRun=7;HaplotypeScore=42.6231;InbreedingCoeff=0.9822;MQ=82.24;MQ0=0;MQRankSum=-3.315;QD=29.67;ReadPosRankSum=2.335;VQSLOD=5.2776;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,9:9:24.07:290,24,0	1/1:0,7:7:18.06:217,18,0	0/0:14,0:14:35.85:0,36,308	0/0:14,0:14:12.89:0,13,202	1/1:2,20:22:57.17:689,57,0	1/1:0,15:15:42.13:507,42,0	1/1:1,9:10:18.06:217,18,0	1/1:4,30:34:87.22:1015,87,0	1/1:0,11:11:24.07:290,24,0	1/1:0,13:13:39.12:471,39,0	1/1:4,24:28:69.14:802,69,0	0/0:21,0:21:54.07:0,54,516	1/1:2,15:17:13.17:442,13,0	1/1:2,14:16:33.10:399,33,0	1/1:0,29:30:84.12:993,84,0	1/1:3,21:24:60.18:725,60,0	1/1:8,11:19:27.08:326,27,0	1/1:2,12:14:39.12:467,39,0	1/1:4,14:18:42.13:507,42,0	1/1:4,30:34:96.23:1126,96,0	1/1:2,11:13:30.09:362,30,0	1/1:2,8:10:27.08:326,27,0	0/0:10,0:10:24.02:0,24,226	0/0:16,0:16:48.08:0,48,464	1/1:1,12:13:30.09:362,30,0	1/1:1,17:18:51.12:583,51,0	1/1:1,19:21:54.17:652,54,0	1/1:4,7:11:27.04:309,27,0
chr10	35925010	.	T	TA	22337.15	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-12.687;DP=621;FS=1.437;HRun=1;HaplotypeScore=51.3770;InbreedingCoeff=0.9958;MQ=79.42;MQ0=0;MQRankSum=-4.047;QD=41.75;ReadPosRankSum=2.318;VQSLOD=5.2864;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,25:25:69.19:1009,69,0	1/1:1,8:9:18.06:270,18,0	0/0:18,0:18:47.30:0,47,546	0/0:10,0:10:27.09:0,27,340	1/1:0,28:29:87.29:1293,87,0	1/1:0,24:24:69.23:1034,69,0	1/1:0,13:13:36.12:540,36,0	1/1:2,26:28:78.26:1168,78,0	1/1:0,16:16:48.16:720,48,0	1/1:1,35:36:99:1554,105,0	1/1:1,30:31:84.28:1259,84,0	0/0:30,0:30:87.26:0,87,1100	1/1:1,21:23:60.20:894,60,0	1/1:0,21:21:63.21:944,63,0	1/1:0,18:18:48.16:720,48,0	1/1:0,29:29:84.27:1259,84,0	1/1:1,14:14:42.14:620,42,0	1/1:0,19:19:54.18:809,54,0	1/1:0,13:13:39.13:584,39,0	1/1:0,30:30:84.28:1259,84,0	1/1:0,12:12:30.10:450,30,0	1/1:0,24:24:72.24:1079,72,0	0/0:22,0:22:60.19:0,60,779	0/0:6,0:6:18.06:0,18,234	1/1:2,20:23:60.18:877,60,0	1/1:0,25:25:75.25:1117,75,0	1/1:2,36:38:92.94:1394,93,0	1/1:0,34:34:99:1484,99,0
chr10	35925387	.	C	CT	14199.40	PASS	AB=0.786;AC=46;AF=0.821;AN=56;BaseQRankSum=-12.147;DP=630;FS=1.367;HRun=8;HaplotypeScore=55.1946;InbreedingCoeff=0.8127;MQ=75.24;MQ0=0;MQRankSum=-2.749;QD=26.34;ReadPosRankSum=1.344;VQSLOD=5.5953;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,20:24:57.13:643,57,0	1/1:2,9:11:27.08:312,27,0	0/0:10,0:11:17.73:0,18,144	0/1:12,0:12:6.29:6,0,135	1/1:3,23:26:63.12:711,63,0	0/1:3,9:12:3.40:218,0,3	1/1:6,20:26:26.69:561,27,0	1/1:8,22:30:63.16:706,63,0	1/1:1,20:21:57.17:658,57,0	1/1:7,16:23:23.67:517,24,0	1/1:0,27:27:75.22:866,75,0	0/0:31,0:31:87.01:0,87,786	1/1:4,18:22:54.16:618,54,0	1/1:2,23:25:63.19:727,63,0	1/1:5,24:29:44.75:769,45,0	1/1:6,23:29:63.19:727,63,0	1/1:2,21:23:60.18:692,60,0	1/1:1,17:18:45.13:519,45,0	1/1:4,18:22:29.71:596,30,0	1/1:6,24:30:41.70:719,42,0	1/1:1,21:22:54.16:623,54,0	1/1:4,17:21:42.12:484,42,0	0/0:22,0:23:62.06:0,62,555	0/0:26,0:26:75.02:0,75,680	1/1:1,16:17:42.12:485,42,0	1/1:4,25:29:75.22:866,75,0	1/1:3,24:25:63.19:727,63,0	1/1:0,13:13:39.12:450,39,0
chr10	35925615	.	TTTG	T	2935.62	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=10.331;DP=567;FS=0.000;HRun=0;HaplotypeScore=91.8000;InbreedingCoeff=0.9835;MQ=71.80;MQ0=1;MQRankSum=-10.289;QD=40.21;ReadPosRankSum=1.560;VQSLOD=4.7926;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:72.25:0,72,1574	0/0:3,0:3:9.03:0,9,204	0/0:25,0:15:45.05:0,45,784	0/0:24,0:20:47.71:0,48,708	1/1:3,23:26:66.12:1031,66,0	0/0:24,0:24:72.23:0,72,1530	0/0:11,0:11:33.11:0,33,720	0/0:39,0:39:99:0,105,2307	1/1:3,12:15:45.10:691,45,0	0/0:16,0:16:45.15:0,45,949	0/0:18,0:18:51.17:0,51,1089	0/0:17,0:17:51.18:0,51,1157	0/0:26,0:26:78.27:0,78,1744	0/0:20,0:20:54.13:0,54,1057	0/0:24,0:24:72.22:0,72,1546	1/1:3,13:16:42.10:684,42,0	1/1:1,15:16:42.13:689,42,0	0/0:13,0:12:36.12:0,36,792	0/0:15,0:15:45.15:0,45,891	0/0:29,0:29:81.26:0,81,1783	0/0:10,0:10:30.09:0,30,576	0/0:18,0:18:54.17:0,54,1155	0/0:16,0:16:42.13:0,42,874	0/0:10,0:10:30.10:0,30,661	0/0:14,0:13:42.14:0,42,955	0/0:25,0:25:69.24:0,69,1524	0/0:43,0:43:99:0,123,2589	0/0:27,0:27:78.27:0,78,1764
chr10	35925629	.	C	CT	1391.21	PASS	AB=0.860;AC=10;AF=0.179;AN=56;BaseQRankSum=6.523;DP=591;FS=12.076;HRun=11;HaplotypeScore=79.5111;InbreedingCoeff=0.5253;MQ=67.96;MQ0=1;MQRankSum=-4.806;QD=7.95;ReadPosRankSum=-0.281;VQSLOD=1.0254;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:27:70.76:0,71,540	0/0:3,0:3:8.97:0,9,70	0/0:25,0:13:15.16:0,15,95	0/0:26,0:18:14.84:0,15,89	1/1:9,19:29:40.86:433,41,0	0/0:18,0:22:53.51:0,54,386	0/0:14,0:15:38.75:0,39,293	0/1:37,3:42:6.60:7,0,481	1/1:4,15:20:41.85:397,42,0	0/0:13,0:14:28.93:0,29,215	0/0:20,0:21:58.80:0,59,444	0/0:22,0:22:50.76:0,51,391	0/0:28,0:29:45.40:0,45,489	0/0:17,0:17:44.78:0,45,344	0/0:25,1:26:38.26:0,38,477	1/1:4,16:20:4.54:396,5,0	0/1:10,11:21:7.40:295,0,7	0/0:14,0:14:30.92:0,31,216	0/1:9,1:10:6.55:7,0,137	0/1:29,2:33:5.73:6,0,424	0/0:8,0:8:20.92:0,21,162	0/0:15,0:15:41.32:0,41,309	0/0:17,0:17:38.83:0,39,302	0/0:8,0:8:14.91:0,15,114	0/0:14,0:14:43.86:0,44,328	0/0:26,0:27:62.73:0,63,487	0/0:33,1:39:52.36:0,52,550	0/0:22,1:23:20.30:0,20,337
chr10	35926722	.	C	CATCA	34866.05	PASS	AB=0.546;AC=44;AF=0.786;AN=56;BaseQRankSum=-10.842;DP=676;FS=0.429;HRun=0;HaplotypeScore=94.2859;InbreedingCoeff=0.8501;MQ=59.66;MQ0=3;MQRankSum=-2.581;QD=61.17;ReadPosRankSum=0.322;VQSLOD=6.5667;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,15:22:57.01:1144,57,0	1/1:1,8:10:21.07:560,21,0	0/0:24,0:15:45.13:0,45,768	0/0:26,0:19:53.99:0,54,960	1/1:3,29:34:75.21:1935,75,0	1/1:4,22:27:63.22:1676,63,0	1/1:4,16:22:48.16:1265,48,0	1/1:13,28:44:99:2851,117,0	1/1:3,13:16:36.12:940,36,0	1/1:7,32:39:99:2802,111,0	1/1:4,16:20:45.08:1045,45,0	0/0:30,0:30:87.30:0,87,1624	1/1:0,32:32:90.31:2398,90,0	1/1:4,19:23:51.18:1352,51,0	1/1:3,22:26:57.20:1494,57,0	0/1:3,17:21:1.71:1262,0,2	1/1:3,15:18:42.10:1045,42,0	0/1:4,17:21:4.78:1227,0,5	1/1:5,16:21:54.12:1208,54,0	1/1:2,19:23:56.95:1159,57,0	1/1:3,24:28:69.24:1820,69,0	1/1:3,23:27:66.18:1689,66,0	0/0:14,0:14:39.11:0,39,668	0/0:11,0:11:30.10:0,30,560	1/1:4,13:18:42.14:1056,42,0	1/1:2,18:20:54.19:1421,54,0	1/1:1,31:32:78.27:2079,78,0	1/1:1,22:24:54.19:1439,54,0
chr10	35926736	.	T	TTA	660.55	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=1.779;DP=657;FS=2.214;HRun=0;HaplotypeScore=178.0650;InbreedingCoeff=0.9939;MQ=63.62;MQ0=3;MQRankSum=-3.739;QD=31.45;ReadPosRankSum=-1.461;VQSLOD=4.1176;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,16:21:45.13:755,45,0	0/0:11,0:11:27.09:0,27,378	0/0:20,1:15:35.96:0,36,389	0/0:19,0:15:32.59:0,33,369	0/0:34,0:34:90.26:0,90,1238	0/0:33,0:33:81.22:0,81,1097	0/0:19,0:19:48.16:0,48,671	0/0:43,0:43:99:0,117,1607	0/0:15,0:15:45.15:0,45,628	0/0:39,0:39:99:0,108,1495	0/0:19,0:19:45.11:0,45,608	0/0:32,0:32:90.27:0,90,1215	0/0:32,0:32:93.31:0,93,1302	0/0:20,0:20:51.17:0,51,713	0/0:25,0:25:60.20:0,60,840	0/0:20,0:20:51.17:0,51,714	0/0:16,0:16:42.14:0,42,588	0/0:21,0:21:54.13:0,54,717	0/0:25,0:24:60.17:0,60,819	0/0:20,0:20:33.11:0,33,462	0/0:28,0:28:60.16:0,60,840	0/0:28,0:28:66.22:0,66,924	0/0:19,0:19:57.19:0,57,798	0/0:11,0:11:33.10:0,33,445	0/0:11,0:11:21.03:0,21,272	0/0:23,0:23:69.23:0,69,966	0/0:32,0:32:81.25:0,81,1116	0/0:20,0:20:57.19:0,57,796
chr10	35926905	.	GTTA	G	13231.67	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=13.326;DP=522;FS=5.084;HRun=0;HaplotypeScore=146.2279;InbreedingCoeff=0.9923;MQ=66.96;MQ0=0;MQRankSum=-6.630;QD=31.81;ReadPosRankSum=6.067;VQSLOD=4.9403;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,17:19:52.80:628,53,0	1/1:3,7:10:20.98:302,21,0	0/0:22,0:19:54.17:0,54,1241	0/0:27,0:22:63.22:0,63,1451	1/1:2,11:13:32.18:369,32,0	1/1:1,23:24:57.18:757,57,0	1/1:1,10:11:33.06:385,33,0	1/1:7,29:36:71.13:1050,71,0	1/1:2,8:11:32.31:382,32,0	1/1:4,15:21:59.86:771,60,0	1/1:2,19:21:44.31:591,44,0	0/0:19,0:19:57.20:0,57,1405	1/1:2,17:19:32.38:592,32,0	1/1:2,5:6:12.70:188,13,0	1/1:1,13:14:41.71:470,42,0	1/1:3,10:13:38.71:465,39,0	1/1:6,20:26:66.47:898,66,0	1/1:5,16:21:29.96:632,30,0	1/1:4,15:19:49.15:615,49,0	1/1:3,17:20:50.52:606,51,0	1/1:3,13:16:31.68:353,32,0	1/1:2,13:15:33.10:403,33,0	0/0:23,0:23:69.22:0,69,1616	0/0:15,0:15:45.15:0,45,1098	1/1:2,16:18:54.16:683,54,0	1/1:3,20:23:63.93:805,64,0	1/1:4,19:23:62.74:760,63,0	1/1:3,13:16:46.06:525,46,0
chr10	35926910	.	GA	G	7505.94	PASS	AB=0.580;AC=45;AF=0.804;AN=56;BaseQRankSum=14.998;DP=535;FS=1.234;HRun=1;HaplotypeScore=143.1291;InbreedingCoeff=0.7814;MQ=63.52;MQ0=1;MQRankSum=-3.475;QD=17.54;ReadPosRankSum=8.874;VQSLOD=4.7159;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,17:21:27.51:328,28,0	1/1:1,7:8:9.24:146,9,0	0/0:22,0:18:51.17:0,51,811	0/0:28,1:21:60.20:0,60,915	1/1:2,12:14:29.47:264,29,0	1/1:2,23:25:56.88:478,57,0	1/1:2,10:12:14.67:170,15,0	0/1:11,29:40:12.56:498,0,13	1/1:2,8:10:10.11:177,10,0	1/1:6,14:20:34.99:417,35,0	1/1:2,19:21:38.19:383,38,0	0/0:21,0:21:63.21:0,63,1003	1/1:2,17:19:35.25:332,35,0	1/1:4,5:8:6.67:125,7,0	1/1:2,13:15:41.55:301,42,0	1/1:4,10:14:6.37:225,6,0	1/1:3,20:23:49.26:509,49,0	1/1:4,16:20:24.93:357,25,0	1/1:4,15:18:28.17:349,28,0	1/1:3,17:20:29.27:340,29,0	1/1:6,13:19:30.55:269,31,0	1/1:3,13:16:1.62:214,2,0	0/0:20,0:20:60.17:0,60,911	0/0:15,0:15:45.14:0,45,696	1/1:1,16:17:50.82:417,51,0	1/1:5,20:25:41.66:503,42,0	1/1:4,19:23:42.12:422,42,0	1/1:5,13:18:9.01:281,9,0
chr10	35928596	.	CAG	C	2288.28	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=10.451;DP=571;FS=3.995;HRun=0;HaplotypeScore=73.4747;InbreedingCoeff=0.9897;MQ=76.35;MQ0=1;MQRankSum=-7.648;QD=36.91;ReadPosRankSum=-0.792;VQSLOD=5.2577;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:39.07:0,39,661	0/0:5,0:5:12.04:0,12,225	0/0:10,0:10:27.08:0,27,476	0/0:15,0:15:38.49:0,38,639	1/1:0,22:22:57.19:837,57,0	0/0:20,0:20:57.20:0,57,1067	0/0:16,0:15:45.11:0,45,733	0/0:40,0:40:99:0,117,2073	1/1:1,15:16:48.15:685,48,0	0/0:27,0:27:78.26:0,78,1427	0/0:25,0:25:75.24:0,75,1371	0/0:14,0:14:36.12:0,36,667	0/0:25,0:25:72.25:0,72,1334	0/0:16,0:16:45.15:0,45,842	0/0:28,0:28:84.24:0,84,1478	1/1:3,13:16:45.13:639,45,0	1/1:3,5:8:21.06:287,21,0	0/0:25,0:25:69.24:0,69,1292	0/0:16,0:16:45.15:0,45,839	0/0:32,0:32:96.32:0,96,1757	0/0:16,0:16:45.13:0,45,810	0/0:20,0:20:48.15:0,48,867	0/0:20,0:20:57.20:0,57,1067	0/0:16,0:16:48.16:0,48,899	0/0:17,0:17:42.10:0,42,692	0/0:36,0:36:99:0,105,1938	0/0:40,0:40:99:0,111,1980	0/0:10,0:10:27.09:0,27,505
chr10	35928619	.	TG	T	2144.39	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=12.244;DP=570;FS=6.516;HRun=2;HaplotypeScore=70.1821;InbreedingCoeff=0.9877;MQ=80.60;MQ0=1;MQRankSum=-11.041;QD=32.49;ReadPosRankSum=-1.070;VQSLOD=2.8226;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:36.12:0,36,537	0/0:5,0:5:15.05:0,15,225	0/0:18,0:18:51.10:0,51,684	0/0:15,0:15:13.22:0,13,541	1/1:3,19:22:57.15:703,57,0	0/0:20,0:20:57.18:0,57,833	0/0:15,0:14:39.13:0,39,585	0/0:38,0:38:99:0,114,1700	1/1:1,19:20:60.18:758,60,0	0/0:21,0:21:63.21:0,63,941	0/0:26,0:26:69.23:0,69,1029	0/0:16,0:16:48.14:0,48,697	0/0:21,0:21:57.19:0,57,853	0/0:15,0:15:39.13:0,39,583	0/0:25,0:25:75.25:0,75,1106	1/1:1,14:15:45.14:578,45,0	1/1:1,8:9:21.07:265,21,0	0/0:27,0:27:75.23:0,75,1101	0/0:15,0:15:45.15:0,45,675	0/0:33,0:33:96.31:0,96,1401	0/0:19,0:19:54.18:0,54,795	0/0:15,0:15:36.12:0,36,535	0/0:19,0:19:54.18:0,54,798	0/0:18,0:18:54.17:0,54,789	0/0:17,0:17:42.14:0,42,629	0/0:33,0:33:99:0,99,1480	0/0:44,0:44:99:0,120,1770	0/0:12,0:12:36.12:0,36,539
chr10	35928677	.	G	GT	11692.62	PASS	AB=1.000;AC=47;AF=0.839;AN=56;BaseQRankSum=-7.447;DP=595;FS=8.595;HRun=9;HaplotypeScore=68.5586;InbreedingCoeff=0.8271;MQ=77.43;MQ0=2;MQRankSum=-4.003;QD=23.57;ReadPosRankSum=-0.087;VQSLOD=5.3921;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,25:26:60.16:664,60,0	1/1:0,6:6:18.05:199,18,0	0/0:42,0:30:6.44:0,6,287	0/1:16,0:11:26.59:27,0,53	1/1:5,15:20:47.90:494,48,0	1/1:2,20:22:54.15:597,54,0	1/1:1,12:13:33.09:363,33,0	1/1:8,32:40:73.19:1026,73,0	1/1:2,14:18:47.80:493,48,0	1/1:9,14:23:39.11:430,39,0	1/1:6,20:26:51.14:564,51,0	0/0:17,0:17:38.97:0,39,338	1/1:2,17:19:45.12:498,45,0	1/1:3,14:17:42.11:462,42,0	1/1:9,19:29:47.55:512,48,0	1/1:2,25:27:63.17:697,63,0	1/1:5,11:16:33.09:362,33,0	1/1:9,16:26:61.51:635,62,0	1/1:3,10:13:9.91:320,10,0	1/1:3,19:22:51.14:564,51,0	1/1:1,16:17:39.11:431,39,0	1/1:2,13:15:30.08:329,30,0	0/0:24,0:24:53.95:0,54,469	0/0:16,0:16:44.97:0,45,386	1/1:0,15:16:33.09:365,33,0	1/1:5,18:23:54.08:561,54,0	1/1:3,33:37:78.04:844,78,0	1/1:0,7:8:24.05:255,24,0
chr10	35928945	.	C	CTT	21097.35	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=6.245;DP=536;FS=1.543;HRun=4;HaplotypeScore=112.0868;InbreedingCoeff=0.9929;MQ=69.07;MQ0=1;MQRankSum=-10.109;QD=46.88;ReadPosRankSum=-0.966;VQSLOD=3.2825;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,13:20:45.11:746,45,0	1/1:3,5:8:21.03:343,21,0	0/0:16,0:16:39.09:0,39,505	0/0:9,0:9:18.05:0,18,232	1/1:7,14:20:45.10:742,45,0	1/1:7,19:26:66.17:1122,66,0	1/1:1,6:7:21.07:377,21,0	1/1:3,30:33:99:1752,99,0	1/1:6,11:16:42.14:719,42,0	1/1:5,13:19:48.16:846,48,0	1/1:3,19:22:57.17:968,57,0	0/0:17,0:17:42.13:0,42,560	1/1:3,19:23:66.23:1185,66,0	1/1:2,11:13:36.12:637,36,0	1/1:6,26:32:87.28:1521,87,0	1/1:5,17:22:60.19:1051,60,0	1/1:2,6:8:21.07:378,21,0	1/1:2,7:9:24.08:432,24,0	1/1:4,13:17:51.17:877,51,0	1/1:7,27:34:90.31:1608,90,0	1/1:3,12:15:42.10:717,42,0	1/1:2,17:19:54.18:957,54,0	0/0:22,0:22:63.16:0,63,820	0/0:22,0:22:54.17:0,54,720	1/1:5,21:26:75.21:1314,75,0	1/1:7,16:22:66.20:1085,66,0	1/1:4,24:28:81.25:1399,81,0	1/1:2,6:8:18.06:324,18,0
chr10	35928961	.	C	CT	15005.13	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=6.702;DP=547;FS=2.098;HRun=4;HaplotypeScore=121.1690;InbreedingCoeff=0.9879;MQ=67.03;MQ0=0;MQRankSum=-9.781;QD=32.48;ReadPosRankSum=0.205;VQSLOD=3.7306;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,21:21:60.20:817,60,0	1/1:0,8:8:24.05:308,24,0	0/0:14,0:14:29.11:0,29,310	0/0:8,0:8:15.22:0,15,199	1/1:2,20:22:47.92:634,48,0	1/1:1,24:25:69.10:865,69,0	1/1:1,6:7:15.05:205,15,0	1/1:6,28:34:84.28:1148,84,0	1/1:3,12:15:33.10:437,33,0	1/1:3,17:20:22.67:647,23,0	1/1:2,19:21:51.13:675,51,0	0/0:17,0:17:48.14:0,48,545	1/1:4,25:29:60.16:799,60,0	1/1:1,17:18:45.15:614,45,0	1/1:4,25:29:78.26:1057,78,0	1/1:3,20:23:60.19:805,60,0	1/1:2,9:10:24.08:328,24,0	1/1:0,9:9:27.09:369,27,0	1/1:5,17:22:51.17:697,51,0	1/1:1,29:30:78.03:945,78,0	1/1:4,11:15:18.02:225,18,0	1/1:3,17:20:42.01:510,42,0	0/0:22,0:22:63.18:0,63,715	0/0:24,0:24:69.20:0,69,782	1/1:0,29:29:84.19:1105,84,0	1/1:2,18:20:51.17:697,51,0	1/1:3,22:26:63.16:831,63,0	1/1:1,7:8:21.07:287,21,0
chr10	35930534	.	G	GCTAGTTAAATGTGCTGTGT	1260.22	PASS	AB=0.690;AC=12;AF=0.857;AN=14;BaseQRankSum=-1.143;DP=29;FS=19.071;HRun=0;HaplotypeScore=31.6901;MQ=196.58;MQ0=0;MQRankSum=-3.207;QD=52.51;ReadPosRankSum=-1.585;VQSLOD=0.7568;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	1/1:1,0:1:2.98:22,3,0	0/1:2,1:9:28.20:710,0,28	0/1:7,0:9:58.27:502,0,58	./.	./.	./.	1/1:1,0:1:3:27,3,0	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	1/1:1,0:1:3:25,3,0	./.	./.	./.	./.	1/1:2,0:2:3:25,3,0	1/1:1,0:1:3:27,3,0	./.	./.
chr10	35931180	.	AT	A	4569.39	PASS	AB=0.990;AC=25;AF=0.446;AN=56;BaseQRankSum=0.283;DP=596;FS=4.637;HRun=1;HaplotypeScore=112.0521;InbreedingCoeff=-0.1072;MQ=70.41;MQ0=0;MQRankSum=-0.202;QD=10.96;ReadPosRankSum=-6.892;VQSLOD=0.2399;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:26.48:0,26,112	0/1:12,0:12:1.93:2,0,32	0/0:21,0:21:37.75:0,38,493	0/0:18,2:19:3.46:0,3,421	1/1:0,15:15:36.01:424,36,0	0/0:27,1:28:12.07:0,12,116	0/1:21,0:21:41.31:41,0,57	0/1:26,1:27:8.50:219,0,8	1/1:0,25:25:69.23:959,69,0	0/1:18,0:18:43.24:43,0,56	0/1:17,0:17:28.70:29,0,66	0/0:24,0:24:72.24:0,72,1000	0/1:11,0:11:27.09:32,0,27	0/1:29,1:30:66.98:118,0,67	0/1:23,0:23:27.49:109,0,27	1/1:0,32:32:81.27:1125,81,0	1/1:0,24:24:69.18:959,69,0	0/1:10,1:11:29.36:45,0,29	1/1:12,2:14:0.83:129,1,0	0/1:15,0:15:21.38:21,0,74	0/1:31,0:31:69.69:117,0,70	0/1:21,0:21:71.79:72,0,80	0/0:26,0:26:78.15:0,78,989	0/0:24,0:24:72.18:0,72,946	0/1:12,0:12:28.37:52,0,28	0/1:26,0:26:13.98:14,0,78	0/1:32,0:32:58.41:58,0,89	0/0:7,0:7:16.65:0,17,59
chr10	35931405	.	TAATGTAATAAACCTGTCTATTGGGCTA	T	30487.46	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=12.420;DP=397;FS=14.563;HRun=0;HaplotypeScore=320.0583;InbreedingCoeff=0.9266;MQ=99.14;MQ0=0;MQRankSum=-14.701;QD=112.09;ReadPosRankSum=3.810;VQSLOD=3.2165;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,15:25:65.88:2544,66,0	1/1:6,2:8:20.80:568,21,0	0/0:27,0:27:81.27:0,81,5350	0/0:25,0:25:72.24:0,72,5019	1/1:2,5:7:14.16:894,14,0	1/1:3,5:8:23.93:1178,24,0	1/1:0,13:12:18.06:1251,18,0	1/1:17,0:18:53.52:444,54,0	1/1:8,11:18:41.92:2312,42,0	1/1:3,5:8:23.98:1181,24,0	1/1:7,8:16:44.71:1412,45,0	0/0:26,0:26:71.88:0,72,7469	1/1:5,6:10:26.96:1238,27,0	1/1:3,9:12:32.89:1738,33,0	1/1:4,11:15:42.01:2530,42,0	1/1:13,13:26:65.76:3121,66,0	1/1:5,4:9:17.79:519,18,0	1/1:0,7:7:9.03:567,9,0	1/1:0,8:8:20.98:789,21,0	1/1:2,5:7:17.99:916,18,0	1/1:5,1:7:11.99:325,12,0	1/1:3,10:13:38.89:2164,39,0	0/0:22,0:22:63.19:0,63,5906	0/0:25,0:25:69.24:0,69,7133	1/1:3,4:7:17.93:658,18,0	1/1:4,7:11:29.97:1622,30,0	1/1:5,11:16:47.93:2469,48,0	1/1:1,0:1:3.01:48,3,0
chr10	35931563	.	C	CTTTT	30303.31	PASS	AB=0.955;AC=47;AF=0.839;AN=56;BaseQRankSum=10.350;DP=579;FS=3.352;HRun=2;HaplotypeScore=118.6406;InbreedingCoeff=0.8655;MQ=83.87;MQ0=0;MQRankSum=-14.538;QD=64.89;ReadPosRankSum=3.296;VQSLOD=5.2256;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:9,34:47:88.37:2738,88,0	1/1:4,8:13:33.11:858,33,0	0/0:27,0:27:69.18:0,69,1218	0/0:21,0:21:59.91:0,60,1022	1/1:6,12:20:48.16:1257,48,0	1/1:5,14:20:57.20:1511,57,0	1/1:6,6:13:33.58:902,34,0	1/1:7,10:21:63.16:1575,63,0	1/1:2,22:24:72.25:1929,72,0	1/1:8,21:28:75.26:1959,75,0	1/1:2,12:14:33.11:838,33,0	0/1:20,1:21:19.01:19,0,1060	1/1:5,14:20:42.14:1082,42,0	1/1:1,16:19:48.16:1310,48,0	1/1:3,16:19:45.15:1185,45,0	1/1:7,16:24:69.21:1731,69,0	1/1:5,24:30:75.26:2025,75,0	1/1:2,10:13:24.08:658,24,0	1/1:7,3:10:24.08:634,24,0	1/1:2,16:18:54.19:1429,54,0	1/1:3,9:13:36.12:916,36,0	1/1:1,16:19:48.16:1312,48,0	0/0:22,0:22:57.19:0,57,1067	0/0:42,0:42:99:0,123,2270	1/1:4,4:8:21.07:524,21,0	1/1:5,23:28:81.28:2188,81,0	1/1:2,14:16:45.02:1232,45,0	1/1:0,7:7:18.06:493,18,0
chr10	35931709	.	GGC	G	4512.16	PASS	AB=1.000;AC=45;AF=0.804;AN=56;BaseQRankSum=11.569;DP=381;FS=6.843;HRun=0;HaplotypeScore=101.3057;InbreedingCoeff=0.8425;MQ=70.51;MQ0=0;MQRankSum=-10.256;QD=15.83;ReadPosRankSum=-4.588;VQSLOD=3.3214;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:11:1.11:69,1,0	1/1:6,0:6:8.70:57,9,0	0/0:21,0:21:43.41:0,43,700	0/0:18,0:17:47.99:0,48,622	1/1:10,0:10:20.78:149,21,0	1/1:10,1:11:28.12:210,28,0	1/1:16,1:17:42.94:341,43,0	1/1:14,0:14:38.72:294,39,0	1/1:17,1:18:49.20:329,49,0	1/1:12,0:12:35.72:263,36,0	1/1:9,0:9:11.71:84,12,0	0/0:10,0:10:30.07:0,30,468	1/1:13,1:14:33.97:214,34,0	1/1:7,1:8:21.19:153,21,0	1/1:11,1:12:21.10:159,21,0	1/1:21,0:21:44.90:348,45,0	1/1:19,0:19:42.27:279,42,0	1/1:10,1:11:23.46:190,23,0	1/1:9,0:9:23.42:168,23,0	0/1:4,0:4:2.59:27,0,3	1/1:17,0:16:26:170,26,0	1/1:4,1:5:8.95:89,9,0	0/0:18,0:18:48.10:0,48,781	0/0:29,0:29:87.20:0,87,1381	1/1:12,0:12:26.65:189,27,0	1/1:14,1:15:38.40:296,38,0	1/1:23,1:24:36.11:310,36,0	1/1:6,0:6:17.76:123,18,0
chr10	35931710	.	GC	G	7260.43	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=11.420;DP=376;FS=11.234;HRun=1;HaplotypeScore=84.5052;InbreedingCoeff=0.9498;MQ=69.46;MQ0=0;MQRankSum=-10.083;QD=25.75;ReadPosRankSum=-4.460;VQSLOD=2.6892;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:11:27.35:171,27,0	1/1:4,2:6:9.02:105,9,0	0/0:19,0:19:33.06:0,33,565	0/0:18,0:17:35.14:0,35,433	1/1:4,5:9:21:247,21,0	1/1:3,8:11:28.79:314,29,0	1/1:6,12:18:50.91:554,51,0	1/1:13,2:15:41.71:352,42,0	1/1:2,16:18:51.10:660,51,0	1/1:10,2:12:35.82:302,36,0	1/1:10,0:10:11.97:100,12,0	0/0:10,0:10:30.06:0,30,363	1/1:7,7:14:38.85:385,39,0	1/1:6,2:8:23.91:218,24,0	1/1:7,3:10:23.81:199,24,0	1/1:8,13:21:55.15:635,55,0	1/1:7,11:18:45.05:548,45,0	1/1:7,4:11:24.02:265,24,0	1/1:4,5:9:24.04:279,24,0	1/1:4,0:4:9.83:71,10,0	1/1:13,4:16:26.94:277,27,0	1/1:3,1:4:8.99:84,9,0	0/0:18,0:18:48.09:0,48,614	0/0:29,0:29:87.19:0,87,1090	1/1:9,4:13:26.94:269,27,0	1/1:10,4:14:38.82:352,39,0	1/1:13,10:23:58.24:657,58,0	1/1:2,4:6:18.04:216,18,0
chr10	35931763	.	A	AAC	14144.59	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-0.653;DP=385;FS=62.559;HRun=0;HaplotypeScore=72.5739;InbreedingCoeff=0.9677;MQ=88.96;MQ0=0;MQRankSum=-9.876;QD=48.44;ReadPosRankSum=1.110;VQSLOD=0.8678;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,13:14:39.13:694,39,0	1/1:0,2:2:6.02:110,6,0	0/0:28,0:28:75.24:0,75,1037	0/0:12,0:12:32.77:0,33,416	1/1:1,6:7:21.07:357,21,0	1/1:0,13:13:39.13:694,39,0	1/1:2,18:20:54.18:950,54,0	1/1:4,29:33:87.30:1564,87,0	1/1:3,7:10:24.06:373,24,0	1/1:1,14:15:42.14:769,42,0	1/1:1,12:13:33.11:603,33,0	0/0:15,0:15:45.15:0,45,645	1/1:1,9:10:27.09:494,27,0	1/1:1,11:12:33.11:604,33,0	1/1:2,12:14:36.12:622,36,0	1/1:2,15:17:48.16:861,48,0	1/1:1,10:11:30.10:549,30,0	1/1:1,6:7:15.05:275,15,0	1/1:2,12:14:36.11:629,36,0	1/1:0,7:7:21.07:384,21,0	1/1:2,12:13:36.12:622,36,0	1/1:1,6:7:21.07:351,21,0	0/0:18,0:18:51.17:0,51,731	0/0:20,0:20:60.16:0,60,837	1/1:2,7:9:24.08:420,24,0	1/1:2,15:17:51.17:916,51,0	1/1:3,15:18:51.17:880,51,0	1/1:0,8:8:24.08:422,24,0
chr10	35931824	.	G	GGTTTTGTT	19759.48	PASS	AB=1.000;AC=45;AF=0.804;AN=56;BaseQRankSum=-3.174;DP=329;FS=184.801;HRun=0;HaplotypeScore=93.9486;InbreedingCoeff=0.7899;MQ=83.74;MQ0=0;MQRankSum=-11.316;QD=86.66;ReadPosRankSum=0.587;VQSLOD=1.0654;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,4:6:9.03:387,9,0	1/1:1,2:3:9.03:382,9,0	0/0:17,0:16:42.14:0,42,1021	0/0:18,0:17:28.73:0,29,831	1/1:2,4:6:15.05:614,15,0	1/1:8,5:13:30.10:1162,30,0	1/1:4,11:15:39.13:1653,39,0	1/1:8,5:17:48.12:1439,48,0	1/1:4,5:9:27.09:984,27,0	1/1:4,2:6:9.03:387,9,0	1/1:7,5:12:24.07:876,24,0	0/0:14,0:14:39.13:0,39,1029	1/1:3,1:4:9.03:387,9,0	1/1:3,0:3:6.02:194,6,0	1/1:9,6:15:30.10:1110,30,0	1/1:5,7:12:30.09:1102,30,0	1/1:5,3:8:10.71:462,11,0	0/1:3,0:3:13.81:58,0,14	1/1:9,3:12:24.08:815,24,0	1/1:10,5:15:36.12:1394,36,0	1/1:9,2:11:15.05:568,15,0	1/1:1,6:8:24.08:1005,24,0	0/0:25,0:25:72.25:0,72,1927	0/0:27,0:27:63.07:0,63,1711	1/1:3,5:9:18.04:667,18,0	1/1:11,8:19:50.91:2016,51,0	1/1:4,12:18:45.15:1839,45,0	1/1:0,4:4:6.02:258,6,0
chr10	35932689	.	T	TATAAAAGTACTCAGATAGGGGGCTGG	74348.39	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=3.068;DP=588;FS=69.660;HRun=0;HaplotypeScore=317.8556;InbreedingCoeff=0.9744;MQ=64.83;MQ0=9;MQRankSum=-14.432;QD=158.86;ReadPosRankSum=-0.326;VQSLOD=2.2170;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:18,2:24:36.12:2344,36,0	1/1:12,3:15:36.12:3598,36,0	0/0:23,0:18:54.16:0,54,2344	0/0:25,0:19:54.19:0,54,2571	1/1:26,2:30:50.24:2661,50,0	1/1:18,1:21:45.15:3077,45,0	1/1:18,0:18:39.09:2347,39,0	1/1:22,0:22:63.19:3281,63,0	1/1:23,0:22:57.19:3756,57,0	1/1:31,6:40:99:9249,105,0	1/1:20,2:24:54.18:2704,54,0	0/0:31,0:31:93.32:0,93,5659	1/1:15,2:22:48.10:2817,48,0	1/1:18,4:25:51.11:3971,51,0	1/1:20,5:27:66.18:5671,66,0	1/1:13,3:25:39.08:3550,39,0	1/1:10,0:9:27.09:1674,27,0	1/1:8,1:9:24.08:2247,24,0	1/1:6,1:9:27.07:1590,27,0	1/1:10,0:10:24.08:1023,24,0	1/1:13,2:21:35.98:1920,36,0	1/1:25,5:31:75.18:5393,75,0	0/0:15,0:15:39.13:0,39,2481	0/0:26,0:25:69.17:0,69,3934	1/1:18,3:22:60.12:4261,60,0	1/1:14,3:17:45.10:4039,45,0	1/1:13,1:17:32.46:2685,32,0	1/1:1,1:3:6.02:490,6,0
chr10	35932690	.	AGAGATGGCTCAGAGGT	A	185.29	PASS	AB=0.899;AC=3;AF=0.054;AN=56;BaseQRankSum=3.431;DP=388;FS=13.487;HRun=0;HaplotypeScore=196.4890;InbreedingCoeff=-0.0724;MQ=74.23;MQ0=12;MQRankSum=1.124;QD=5.79;ReadPosRankSum=-3.970;VQSLOD=0.6651;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:9:23.96:0,24,675	0/0:11,0:11:29.81:0,30,882	0/0:23,0:18:54.16:0,54,2624	0/0:24,0:18:54.19:0,54,3160	0/0:16,0:16:20.22:0,20,169	0/0:11,0:11:21.07:0,21,809	0/0:10,0:10:23.87:0,24,334	0/1:9,7:16:99:230,0,1399	0/1:11,0:10:27.89:28,0,447	0/0:23,0:23:66.23:0,66,4141	0/0:15,0:15:21.02:0,21,427	0/0:31,0:31:93.32:0,93,6491	0/0:11,0:11:27.09:0,27,1174	0/0:18,0:18:35.91:0,36,1310	0/0:16,0:16:42.01:0,42,1298	0/0:13,0:13:33.11:0,33,1561	0/1:5,0:4:26.62:27,0,137	0/0:8,0:7:21.07:0,21,1144	0/0:6,0:6:15.05:0,15,672	0/0:4,0:4:11.95:0,12,279	0/0:8,0:7:1.07:0,1,196	0/0:21,0:21:44.94:0,45,899	0/0:14,0:14:39.13:0,39,3030	0/0:27,0:26:72.25:0,72,5173	0/0:10,0:10:23.78:0,24,452	0/0:11,0:10:30.10:0,30,1807	0/0:11,0:11:24.08:0,24,1335	0/0:2,0:2:6.02:0,6,307
chr10	35932844	.	AAAAT	A	11876.62	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=9.988;DP=446;FS=10.512;HRun=0;HaplotypeScore=101.5602;InbreedingCoeff=0.9073;MQ=40.71;MQ0=47;MQRankSum=-7.980;QD=33.08;ReadPosRankSum=-0.097;VQSLOD=4.4474;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,10:12:24.08:424,24,0	1/1:0,4:4:9.03:160,9,0	0/0:19,0:6:18.06:0,18,451	0/0:9,0:3:9.03:0,9,185	1/1:2,23:25:60.16:1033,60,0	1/1:1,14:15:39.13:687,39,0	1/1:3,6:8:18.06:316,18,0	1/1:8,13:16:36.12:625,36,0	1/1:1,14:15:33.11:587,33,0	1/1:6,24:27:60.21:1067,60,0	1/1:3,12:15:29.60:466,30,0	0/0:20,0:20:45.15:0,45,1105	1/1:0,12:12:24.08:426,24,0	1/1:1,11:11:18.06:320,18,0	1/1:3,7:9:15.05:267,15,0	1/1:2,7:8:18.06:320,18,0	1/1:3,8:10:6.81:157,7,0	1/1:4,4:4:6.02:107,6,0	1/1:4,8:11:24.08:410,24,0	1/1:4,35:39:87.22:1481,87,0	1/1:4,8:10:15.05:267,15,0	1/1:4,22:26:51.09:840,51,0	0/0:23,0:23:48.16:0,48,1221	0/0:16,0:12:30.10:0,30,768	1/1:3,20:23:45.15:801,45,0	1/1:6,11:16:33.11:581,33,0	1/1:2,8:10:15.05:267,15,0	1/1:0,6:6:15.05:267,15,0
chr10	35933063	.	C	CA	2514.67	PASS	AB=0.981;AC=49;AF=0.875;AN=56;BaseQRankSum=5.979;DP=492;FS=7.815;HRun=17;HaplotypeScore=206.2874;InbreedingCoeff=0.3025;MQ=51.79;MQ0=2;MQRankSum=-6.228;QD=5.20;ReadPosRankSum=-1.411;VQSLOD=0.0285;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:18:18.05:90,18,0	1/1:9,0:9:19.65:94,20,0	0/1:17,0:9:0.65:1,0,25	0/0:8,0:6:5.31:0,5,28	1/1:22,0:22:16.04:71,16,0	1/1:20,0:20:31.30:160,31,0	1/1:22,0:22:26.55:124,27,0	1/1:31,0:30:50.65:242,51,0	1/1:22,0:22:29.60:144,30,0	1/1:11,0:10:10.52:42,11,0	0/1:12,0:12:0:1,0,0	0/1:11,0:11:10.07:10,0,21	1/1:9,0:9:8.52:42,9,0	1/1:12,0:11:25.38:123,25,0	1/1:25,0:25:50.84:246,51,0	1/1:27,0:27:39.73:198,40,0	1/1:13,2:15:7.18:45,7,0	1/1:14,0:14:14.12:69,14,0	1/1:26,0:26:24.66:116,25,0	1/1:21,0:21:33.93:166,34,0	1/1:8,0:8:8.76:38,9,0	1/1:13,0:13:5.68:29,6,0	0/1:16,1:20:25.59:26,0,38	0/1:18,1:21:15.11:15,0,76	1/1:17,0:17:11.27:56,11,0	1/1:23,0:23:27.93:146,28,0	1/1:27,0:26:53.48:255,53,0	1/1:10,0:10:19.75:96,20,0
chr10	35933067	.	A	AAAAC	6185.90	PASS	AB=0.940;AC=26;AF=0.464;AN=56;BaseQRankSum=16.017;DP=511;FS=3.230;HRun=0;HaplotypeScore=227.0528;InbreedingCoeff=-0.2967;MQ=51.77;MQ0=2;MQRankSum=-7.436;QD=14.83;ReadPosRankSum=2.510;VQSLOD=4.2112;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:20,0:19:99:108,0,174	1/1:9,0:9:14.18:272,14,0	0/0:21,0:11:1.63:0,2,116	0/0:8,0:6:5.67:0,6,74	0/1:20,0:20:99:119,0,126	0/1:21,0:21:75.71:300,0,76	0/1:22,0:22:99:339,0,133	0/1:33,0:32:99:628,0,100	0/1:21,0:21:99:228,0,121	0/1:9,0:20:68.67:219,0,69	0/0:11,0:11:26.72:0,27,184	0/0:12,0:12:30.86:0,31,310	0/1:5,5:16:5.20:125,0,5	1/1:12,0:11:30.05:372,30,0	1/1:25,0:25:30.13:590,30,0	0/1:28,0:28:99:366,0,127	0/1:14,0:14:69.65:85,0,70	0/1:13,0:13:99:131,0,116	0/1:26,0:27:99:255,0,267	0/1:18,0:18:56.55:347,0,57	0/1:10,0:10:3.81:197,0,4	0/1:10,0:16:33.86:34,0,137	0/0:21,0:21:49.92:0,50,510	0/0:21,0:21:61.15:0,61,702	0/1:15,0:15:80.53:141,0,81	0/1:19,0:19:72.76:396,0,73	1/1:27,0:26:66.10:793,66,0	0/1:10,0:10:42.39:144,0,42
chr10	35933075	.	A	AC	339.18	PASS	AB=0.884;AC=11;AF=0.196;AN=56;BaseQRankSum=-0.748;DP=537;FS=9.097;HRun=0;HaplotypeScore=131.2589;InbreedingCoeff=-0.2210;MQ=58.63;MQ0=2;MQRankSum=-4.834;QD=1.60;ReadPosRankSum=2.609;VQSLOD=2.0869;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:20:56.59:0,57,385	0/1:9,1:10:7.70:8,0,123	0/0:24,0:14:6.27:0,6,110	0/0:11,0:9:14.41:0,14,115	0/0:20,0:20:41.38:0,41,272	0/1:20,3:23:43.71:44,0,163	0/1:25,1:26:82.33:82,0,198	0/1:36,0:35:5.34:5,0,405	0/0:20,0:20:56.17:0,56,374	0/1:18,1:18:0.93:1,0,157	0/1:12,0:12:36.59:45,0,37	0/0:13,0:13:33.01:0,33,320	0/0:14,1:15:9.61:0,10,85	0/0:10,3:12:19.01:0,19,146	0/0:22,5:27:18.46:0,18,265	0/0:30,0:30:84.91:0,85,547	0/0:15,0:15:38.10:0,38,263	0/1:12,1:13:50.24:76,0,50	0/1:19,11:30:99:113,0,246	0/1:9,7:16:3.07:3,0,124	0/0:11,0:11:19.33:0,19,167	0/1:16,1:17:28.85:29,0,61	0/0:20,0:20:53.96:0,54,454	0/0:23,0:23:60.85:0,61,572	0/0:8,5:14:11.72:0,12,72	0/0:19,0:20:48.07:0,48,308	0/0:28,0:27:68.05:0,68,469	0/1:6,4:10:17.46:69,0,17
chr10	35933077	.	A	AAAAAAACAAAAAAAAAC	48109.82	PASS	AB=1.000;AC=45;AF=0.804;AN=56;BaseQRankSum=-0.421;DP=539;FS=51.926;HRun=0;HaplotypeScore=270.3661;InbreedingCoeff=0.8714;MQ=60.72;MQ0=2;MQRankSum=-8.383;QD=107.15;ReadPosRankSum=4.030;VQSLOD=2.7588;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:21:99:227,0,210	1/1:10,1:11:29.89:1005,30,0	0/0:25,0:15:25.93:0,26,262	0/0:12,0:10:10.18:0,10,145	1/1:20,0:20:53.12:1967,53,0	1/1:19,3:22:62.99:3007,63,0	1/1:24,1:26:72.15:3252,72,0	1/1:37,0:36:99:4397,99,0	1/1:21,0:23:62.58:2652,63,0	1/1:18,0:17:35.90:1205,36,0	1/1:11,0:11:17.97:758,18,0	0/0:13,0:13:29.62:0,30,495	1/1:13,1:15:27.49:1154,27,0	1/1:10,2:12:33.10:1759,33,0	1/1:22,5:28:69.56:3674,70,0	1/1:25,0:30:79.12:3748,79,0	1/1:16,0:17:25.20:923,25,0	1/1:10,1:12:33.10:1771,33,0	1/1:26,0:27:72.15:2970,72,0	1/1:9,5:16:42.14:2770,42,0	1/1:12,0:12:35.91:536,36,0	1/1:14,1:16:24.03:1222,24,0	0/0:19,0:19:23.48:0,23,871	0/0:21,0:21:23.10:0,23,1112	1/1:12,2:14:27.06:1319,27,0	1/1:19,0:21:57.13:2771,57,0	1/1:27,0:27:75.16:3650,75,0	1/1:6,4:10:27.08:1375,27,0
chr10	35933654	.	A	AGT	24197.77	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=9.609;DP=610;FS=9.952;HRun=0;HaplotypeScore=120.2812;InbreedingCoeff=0.9965;MQ=81.58;MQ0=0;MQRankSum=-5.709;QD=46.80;ReadPosRankSum=3.734;VQSLOD=5.6608;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,44:53:99:2459,132,0	1/1:0,15:15:42.14:783,42,0	0/0:19,0:19:54.16:0,54,766	0/0:16,0:16:23.78:0,24,567	1/1:1,7:8:18.06:337,18,0	1/1:3,13:16:33.11:618,33,0	1/1:8,21:29:69.24:1286,69,0	1/1:4,24:28:78.23:1364,78,0	1/1:1,22:24:60.21:1107,60,0	1/1:3,14:17:45.09:774,45,0	1/1:2,13:15:33.11:609,33,0	0/0:24,0:24:69.19:0,69,974	1/1:1,21:22:51.13:916,51,0	1/1:0,25:25:72.25:1344,72,0	1/1:2,25:27:72.25:1343,72,0	1/1:2,30:32:81.28:1513,81,0	1/1:3,34:38:96.25:1796,96,0	1/1:0,24:24:66.23:1236,66,0	1/1:2,10:12:33.10:557,33,0	1/1:0,14:14:30.10:558,30,0	1/1:3,27:30:71.75:1344,72,0	1/1:3,20:23:54.19:1006,54,0	0/0:9,0:9:27.04:0,27,370	0/0:25,0:25:75.23:0,75,1082	1/1:1,10:11:30.10:562,30,0	1/1:0,16:17:51.14:891,51,0	1/1:2,27:29:72.25:1347,72,0	1/1:0,8:8:24.08:449,24,0
chr10	35934308	.	T	TC	21712.15	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=12.545;DP=686;FS=5.545;HRun=1;HaplotypeScore=122.1933;InbreedingCoeff=0.9916;MQ=87.68;MQ0=0;MQRankSum=-4.779;QD=39.77;ReadPosRankSum=2.423;VQSLOD=4.3792;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,35:36:96.32:1427,96,0	1/1:0,7:7:21.07:315,21,0	0/0:20,0:20:57:0,57,656	0/0:27,0:27:68.97:0,69,822	1/1:0,6:7:21.07:304,21,0	1/1:1,18:19:48.16:719,48,0	1/1:3,29:32:81.27:1214,81,0	1/1:2,27:29:84.24:1234,84,0	1/1:0,29:29:87.29:1301,87,0	1/1:0,24:24:69.23:1034,69,0	1/1:0,8:8:15.05:224,15,0	0/0:35,0:35:99:0,105,1363	1/1:0,19:19:53.99:809,54,0	1/1:1,32:33:93.31:1388,93,0	1/1:3,33:36:93.32:1393,93,0	1/1:1,29:30:78.21:1169,78,0	1/1:0,25:25:72.24:1079,72,0	1/1:0,15:15:42.14:630,42,0	1/1:3,20:23:66.19:927,66,0	1/1:0,11:11:21.03:289,21,0	1/1:0,39:39:99:1484,99,0	1/1:2,26:28:69.19:1003,69,0	0/0:18,0:18:48.16:0,48,622	0/0:40,0:40:99:0,114,1480	1/1:2,24:26:63.21:944,63,0	1/1:2,32:34:99:1432,99,0	1/1:1,28:28:75.25:1123,75,0	1/1:0,7:7:18.06:270,18,0
chr10	35934619	.	GTGGACT	G	3191.88	PASS	AB=0.993;AC=30;AF=0.536;AN=56;BaseQRankSum=10.205;DP=563;FS=0.824;HRun=0;HaplotypeScore=234.7162;InbreedingCoeff=-0.7217;MQ=81.85;MQ0=0;MQRankSum=-12.247;QD=5.81;ReadPosRankSum=12.827;VQSLOD=0.3673;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:25:99:120,0,183	0/1:13,0:13:22.68:123,0,23	0/1:22,1:23:86.31:86,0,459	0/1:22,4:26:99:253,0,365	1/1:7,0:7:8.46:67,8,0	1/1:8,0:8:19:96,19,0	0/1:26,0:26:89.16:89,0,222	0/0:14,0:14:1.84:0,2,295	0/1:24,0:24:83.44:163,0,83	0/1:22,0:22:95.40:122,0,95	0/1:7,0:7:32.62:33,0,37	0/1:19,0:19:29.93:206,0,30	0/1:26,0:26:99:185,0,136	1/1:38,0:38:16.29:417,16,0	0/1:43,0:42:99:373,0,193	0/1:26,0:26:89.72:191,0,90	0/1:27,0:27:46.36:134,0,46	0/1:14,0:14:15.14:15,0,425	0/1:13,0:12:0.08:0,0,329	0/1:11,0:11:77.78:78,0,125	0/1:37,0:37:63.54:64,0,399	0/1:10,0:10:28.68:29,0,63	0/1:13,0:13:64.83:65,0,125	0/1:26,0:26:64.36:87,0,64	0/1:12,0:12:61.46:61,0,96	0/1:19,0:19:99:103,0,293	0/1:27,0:27:20.29:149,0,20	0/1:7,0:7:37.36:37,0,54
chr10	35934713	.	GT	G	22265.72	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=10.726;DP=863;FS=6.036;HRun=4;HaplotypeScore=170.6139;InbreedingCoeff=0.9997;MQ=75.52;MQ0=0;MQRankSum=-3.385;QD=32.18;ReadPosRankSum=5.115;VQSLOD=2.7215;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,43:45:99:1404,117,0	1/1:0,13:13:36.11:432,36,0	0/0:38,0:35:98.69:0,99,1281	0/0:32,0:32:83.16:0,83,1102	1/1:2,30:32:87.27:1040,87,0	1/1:0,26:26:72.22:864,72,0	1/1:3,36:39:99:1220,102,0	1/1:0,36:36:99:1280,108,0	1/1:1,23:24:66.20:791,66,0	1/1:0,28:28:84.23:994,84,0	1/1:3,22:25:63.19:753,63,0	0/0:34,0:34:99:0,99,1386	1/1:2,25:27:66.20:792,66,0	1/1:0,35:35:96.29:1151,96,0	1/1:2,32:34:96.28:1136,96,0	1/1:1,31:32:81.25:969,81,0	1/1:1,32:33:87.27:1044,87,0	1/1:2,31:33:52.20:1037,52,0	1/1:2,20:22:39.23:637,39,0	1/1:1,17:18:48.15:576,48,0	1/1:1,55:56:99:1655,138,0	1/1:1,30:31:87.27:1042,87,0	0/0:22,0:22:63.20:0,63,864	0/0:45,0:45:99:0,126,1736	1/1:2,24:26:69.21:828,69,0	1/1:2,31:33:93.29:1115,93,0	1/1:2,33:35:99:1182,99,0	1/1:0,9:9:27.08:324,27,0
chr10	35935547	.	T	TAAAAA	1884.50	PASS	AB=0.895;AC=25;AF=0.463;AN=54;BaseQRankSum=4.170;DP=329;FS=1.474;HRun=0;HaplotypeScore=84.8107;InbreedingCoeff=0.1555;MQ=53.24;MQ0=7;MQRankSum=-2.825;QD=8.81;ReadPosRankSum=-1.648;VQSLOD=2.1697;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:15,0:17:6.54:49,0,7	0/0:2,0:3:0.82:0,1,2	0/0:12,0:6:10.87:0,11,173	0/0:8,0:7:4.36:0,4,49	0/0:16,0:15:1.75:0,2,67	1/1:17,0:18:0.71:113,1,0	1/1:6,1:7:0.42:87,0,0	0/1:15,0:14:57.97:70,0,58	0/0:13,0:12:21.07:0,21,279	1/1:14,2:16:10.89:244,11,0	1/1:8,0:10:2.55:92,3,0	0/0:17,0:17:48.14:0,48,937	0/1:8,2:8:0.75:142,0,1	1/1:5,1:6:2.60:79,3,0	0/1:7,0:8:7.40:38,0,7	0/1:17,0:16:84.25:84,0,202	0/0:15,0:13:16.96:0,17,180	0/1:12,0:12:5.88:78,0,6	1/1:6,0:6:1.82:11,2,0	0/1:13,1:14:6.22:69,0,6	0/0:2,0:2:2.49:0,2,6	./.	0/0:13,0:13:39.09:0,39,789	0/0:14,0:13:36.11:0,36,718	0/1:11,5:17:52.96:407,0,53	1/1:7,3:12:14.94:321,15,0	0/1:12,2:14:12.73:62,0,13	1/1:6,0:10:10.43:96,10,0
chr10	35935548	.	T	TAAAA	6403.46	PASS	AB=1.000;AC=42;AF=0.778;AN=54;BaseQRankSum=5.664;DP=412;FS=12.256;HRun=13;HaplotypeScore=129.3090;InbreedingCoeff=0.6415;MQ=49.58;MQ0=7;MQRankSum=-7.991;QD=18.19;ReadPosRankSum=-4.292;VQSLOD=0.7561;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:21:18.75:217,19,0	1/1:4,0:4:3.01:57,3,0	0/0:13,0:6:14.93:0,15,152	0/1:9,0:7:2.53:3,0,36	1/1:16,1:18:15.10:182,15,0	1/1:26,0:24:30.09:551,30,0	1/1:10,0:10:12.02:201,12,0	0/1:17,0:16:25.97:134,0,26	1/1:13,2:14:6.02:119,6,0	1/1:24,0:23:33.11:635,33,0	1/1:18,0:18:28.80:438,29,0	0/0:17,0:18:32.65:0,33,402	1/1:13,0:11:12.04:218,12,0	1/1:10,0:10:17.27:300,17,0	1/1:12,0:12:17.27:310,17,0	1/1:12,4:18:21.07:436,21,0	1/1:12,1:16:16.21:227,16,0	1/1:14,0:13:6.02:124,6,0	0/1:7,0:6:0:0,0,0	1/1:15,0:15:9.01:132,9,0	0/1:3,0:3:0:0,0,0	./.	0/0:13,0:13:32.88:0,33,396	0/0:14,0:14:23.81:0,24,289	1/1:24,0:24:6.36:735,6,0	1/1:17,0:17:27.09:525,27,0	1/1:23,0:23:30.10:553,30,0	1/1:13,0:13:20.28:306,20,0
chr10	35935886	.	T	TGG	3836.26	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-0.180;DP=738;FS=12.521;HRun=7;HaplotypeScore=128.4596;InbreedingCoeff=0.9955;MQ=74.59;MQ0=1;MQRankSum=-1.642;QD=36.19;ReadPosRankSum=4.682;VQSLOD=2.3979;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:81.21:0,81,933	0/0:6,0:6:18.05:0,18,210	0/0:36,0:33:65.80:0,66,726	0/0:42,0:40:62.81:0,63,750	1/1:2,17:19:39.13:638,39,0	0/0:17,0:17:48.10:0,48,544	0/0:23,0:23:63.14:0,63,719	0/0:22,0:22:51.13:0,51,578	1/1:3,23:27:57.19:896,57,0	0/0:31,0:31:84.25:0,84,978	0/0:10,0:10:18.05:0,18,207	0/0:29,0:29:81.22:0,81,932	0/0:28,0:28:75.22:0,75,874	0/0:39,0:39:99:0,108,1258	0/0:25,0:25:66.10:0,66,739	1/1:4,21:25:60.20:976,60,0	1/1:4,29:35:81.28:1327,81,0	0/0:26,0:26:66.15:0,66,754	0/0:26,0:26:57.13:0,57,653	0/0:22,0:22:45.12:0,45,513	0/0:58,1:60:99:0,103,1627	0/0:15,0:15:42.10:0,42,469	0/0:18,0:18:42.08:0,42,475	0/0:35,0:35:90.25:0,90,1049	0/0:19,0:19:39.09:0,39,440	0/0:22,0:22:63.18:0,63,725	0/0:21,0:20:51.10:0,51,579	0/0:25,0:24:57.14:0,57,664
chr10	35936090	.	T	TA	387.09	PASS	AB=0.862;AC=11;AF=0.196;AN=56;BaseQRankSum=5.186;DP=350;FS=1.875;HRun=1;HaplotypeScore=138.4917;InbreedingCoeff=-0.2525;MQ=62.27;MQ0=1;MQRankSum=-4.437;QD=3.55;ReadPosRankSum=-2.196;VQSLOD=-0.5371;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:7,2:9:65.53:66,0,199	0/0:3,0:3:9.03:0,9,111	0/0:32,0:29:87.26:0,87,1090	0/0:39,0:29:83.73:0,84,1016	0/0:5,1:6:9.87:0,10,86	0/0:20,1:21:12.13:0,12,596	0/0:10,0:10:21.07:0,21,260	0/1:5,0:5:35.48:35,0,65	0/0:8,0:8:24.08:0,24,297	0/1:8,2:10:60.24:60,0,233	0/1:4,1:5:32.76:33,0,99	0/0:21,0:19:57.19:0,57,739	0/1:14,2:16:44.55:45,0,438	0/0:16,0:16:45.14:0,45,557	0/0:12,0:12:36.11:0,36,445	0/0:16,0:15:42.13:0,42,520	0/0:2,0:2:5.98:0,6,57	0/1:9,4:13:99:143,0,224	0/1:7,1:6:46.74:47,0,131	0/0:5,0:5:15:0,15,168	0/1:13,1:13:11.70:12,0,339	0/1:7,1:8:18.66:19,0,181	0/0:13,0:13:27.09:0,27,350	0/0:21,0:21:38.71:0,39,460	0/0:4,2:6:12.04:0,12,146	0/0:10,0:10:21.07:0,21,260	0/1:13,1:14:5.78:6,0,404	0/1:4,3:7:67.29:67,0,131
chr10	35936138	.	TA	T	3451.52	PASS	AC=44;AF=1.000;AN=44;DP=157;FS=0.000;HRun=2;HaplotypeScore=62.8169;InbreedingCoeff=-0.0078;MQ=37.57;MQ0=2;QD=24.83;VQSLOD=3.2846;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,1:3:3.01:35,3,0	./.	1/1:1,9:1:2.74:12,3,0	./.	1/1:0,2:2:1.72:6,2,0	1/1:0,3:3:9.03:117,9,0	./.	1/1:3,1:4:3.01:39,3,0	1/1:0,10:10:24.08:307,24,0	1/1:0,2:2:6.02:75,6,0	1/1:0,2:2:3.01:39,3,0	1/1:2,23:22:54.18:700,54,0	1/1:0,5:5:15.05:191,15,0	1/1:0,4:4:9.03:117,9,0	1/1:0,2:1:3.01:38,3,0	1/1:0,15:14:30.10:388,30,0	1/1:0,3:2:3.01:39,3,0	1/1:1,4:5:14.98:170,15,0	1/1:1,2:2:6.02:78,6,0	./.	./.	1/1:1,1:2:6.02:71,6,0	1/1:0,9:9:24.08:306,24,0	1/1:0,20:20:41.42:457,41,0	1/1:0,2:2:3.01:39,3,0	./.	1/1:2,3:5:9.03:117,9,0	1/1:0,3:3:9.03:112,9,0
chr10	35936413	.	T	TC	24222.29	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=12.036;DP=809;FS=4.044;HRun=1;HaplotypeScore=174.2197;InbreedingCoeff=0.9990;MQ=73.94;MQ0=7;MQRankSum=-7.577;QD=38.03;ReadPosRankSum=2.343;VQSLOD=4.3951;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,35:35:99:1358,99,0	1/1:0,7:7:21.07:315,21,0	0/0:46,0:32:81.24:0,81,1015	0/0:42,0:35:98.67:0,99,1195	1/1:1,27:28:51.16:764,51,0	1/1:1,25:25:66.22:989,66,0	1/1:4,32:36:90.30:1348,90,0	1/1:5,19:21:48.16:719,48,0	1/1:7,38:44:99:1643,111,0	1/1:3,27:29:81.26:1195,81,0	1/1:1,13:14:42.13:609,42,0	0/0:31,0:31:90.29:0,90,1165	1/1:3,25:28:66.22:989,66,0	1/1:1,33:34:90.30:1348,90,0	1/1:1,26:27:72.24:1078,72,0	1/1:4,35:38:99:1525,102,0	1/1:4,38:42:99:1638,111,0	1/1:0,34:34:81.27:1214,81,0	1/1:1,15:15:42.07:581,42,0	1/1:1,21:22:51.17:764,51,0	1/1:3,39:42:99:1709,115,0	1/1:1,26:27:78.26:1162,78,0	0/0:14,0:14:39.13:0,39,506	0/0:39,0:39:99:0,111,1412	1/1:2,16:18:48.12:694,48,0	1/1:4,23:27:69.23:1034,69,0	1/1:0,25:24:72.20:1052,72,0	1/1:0,11:11:33.11:494,33,0
chr10	35936528	.	T	TG	19102.62	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=13.679;DP=766;FS=28.615;HRun=4;HaplotypeScore=198.3841;InbreedingCoeff=0.9988;MQ=72.04;MQ0=0;MQRankSum=-5.640;QD=31.06;ReadPosRankSum=1.945;VQSLOD=1.5019;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,40:45:99:1393,102,0	1/1:0,17:17:41.35:540,41,0	0/0:33,0:33:75.19:0,75,835	0/0:18,0:18:39.10:0,39,436	1/1:4,19:23:33.09:424,33,0	1/1:7,23:30:72.21:952,72,0	1/1:5,27:32:84.28:1138,84,0	1/1:4,20:24:42.14:573,42,0	1/1:2,28:30:84.28:1142,84,0	1/1:5,32:37:93.26:1212,93,0	1/1:3,13:16:21.07:285,21,0	0/0:41,0:41:99:0,105,1178	1/1:2,20:22:50.97:695,51,0	1/1:2,25:27:38.20:909,38,0	1/1:4,26:30:69.23:942,69,0	1/1:8,20:28:69.21:914,69,0	1/1:5,34:39:93.28:1240,93,0	1/1:3,15:18:48.10:619,48,0	1/1:2,20:22:63.21:846,63,0	1/1:4,13:17:36.12:491,36,0	1/1:3,28:31:66.18:881,66,0	1/1:3,31:34:69.19:921,69,0	0/0:19,0:19:31.14:0,31,381	0/0:40,0:40:99:0,99,1092	1/1:3,27:30:69.19:921,69,0	1/1:5,20:25:69.22:917,69,0	1/1:3,20:22:51.17:697,51,0	1/1:1,14:15:33.11:451,33,0
chr10	35936979	.	G	GGC	6577.73	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=12.224;DP=936;FS=5.629;HRun=0;HaplotypeScore=415.5854;InbreedingCoeff=0.8740;MQ=37.47;MQ0=39;MQRankSum=-7.770;QD=9.41;ReadPosRankSum=1.223;VQSLOD=3.7068;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:24,7:30:5.70:96,6,0	1/1:9,5:14:27.93:215,28,0	0/0:55,0:12:22.26:0,22,244	0/0:61,0:19:28.84:0,29,338	1/1:14,0:13:4.47:20,4,0	1/1:15,3:18:25.32:187,25,0	1/1:35,8:44:23.14:146,23,0	1/1:43,0:43:87.31:629,87,0	1/1:38,0:37:70.14:445,70,0	1/1:34,3:36:50.97:425,51,0	1/1:11,4:14:8.48:64,8,0	0/0:35,0:43:99:0,108,1146	1/1:22,10:32:41.60:373,42,0	1/1:34,21:54:81.42:555,81,0	1/1:27,10:36:43.53:286,44,0	1/1:32,0:32:67.94:493,68,0	1/1:28,0:28:36.53:284,37,0	1/1:20,3:24:15.98:287,16,0	1/1:24,4:25:55.91:411,56,0	1/1:12,2:15:8.76:51,9,0	1/1:76,1:76:21.98:305,22,0	1/1:13,5:18:10.71:87,11,0	0/0:17,0:16:5.71:0,6,446	0/0:55,0:58:99:0,140,1717	1/1:17,11:28:32.89:220,33,0	1/1:29,6:34:69.67:488,70,0	1/1:10,5:15:14.51:174,15,0	1/1:12,5:17:47.71:336,48,0
chr10	35936984	.	G	GCA	2559.96	PASS	AB=0.808;AC=22;AF=0.393;AN=56;BaseQRankSum=12.625;DP=973;FS=0.000;HRun=0;HaplotypeScore=439.6217;InbreedingCoeff=-0.3839;MQ=35.34;MQ0=56;MQRankSum=-6.194;QD=4.43;ReadPosRankSum=6.519;VQSLOD=0.6605;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,7:29:0.63:0,1,148	0/1:10,4:14:67.04:99,0,67	0/0:58,0:14:27.13:0,27,506	0/0:58,0:17:45.13:0,45,654	1/1:8,5:12:4.47:20,4,0	0/1:14,3:17:44.88:60,0,45	0/1:41,8:48:68.70:69,0,191	0/0:42,0:42:1.34:0,1,659	0/1:24,14:37:52.56:384,0,53	0/1:37,2:35:59.07:59,0,289	0/1:11,4:13:4.28:14,0,4	0/0:45,0:43:99:0,108,1558	0/1:27,10:35:99:179,0,144	0/1:39,21:57:99:208,0,130	0/1:30,10:38:99:117,0,110	1/1:21,14:35:3.58:450,4,0	0/1:15,11:26:63.83:326,0,64	0/1:25,3:28:72.23:72,0,287	0/1:24,4:25:99:120,0,330	0/1:13,3:15:19.29:23,0,19	0/0:79,1:72:34.49:0,34,397	0/1:13,5:18:3.68:51,0,4	0/0:20,0:17:44.87:0,45,650	0/0:59,0:59:99:0,146,2216	0/1:20,11:31:47.46:47,0,88	0/1:29,6:34:99:131,0,231	0/1:12,5:17:9.52:167,0,10	0/1:16,5:17:53.26:121,0,53
chr10	35936988	.	GTGTGTGT	G	8941.40	PASS	AB=0.819;AC=22;AF=0.393;AN=56;BaseQRankSum=6.537;DP=897;FS=22.851;HRun=0;HaplotypeScore=422.6173;InbreedingCoeff=-0.5184;MQ=35.04;MQ0=57;MQRankSum=-8.147;QD=15.21;ReadPosRankSum=8.160;VQSLOD=1.7358;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:18,5:22:1.26:385,0,1	0/1:10,1:11:65.63:66,0,220	0/0:56,0:13:36:0,36,545	0/0:58,0:17:48.16:0,48,951	0/0:11,1:11:3.06:0,3,8	0/1:13,3:16:99:245,0,122	0/1:36,9:44:99:553,0,131	0/1:27,4:30:99:183,0,527	0/1:26,10:35:99:1037,0,242	0/1:28,10:34:99:472,0,298	0/1:14,2:14:22.46:22,0,41	0/0:39,0:37:93.20:0,93,2520	0/1:19,12:30:99:849,0,209	0/1:48,7:55:99:925,0,492	0/1:22,14:36:99:881,0,243	0/1:28,6:34:99:683,0,314	0/1:17,6:24:99:411,0,213	0/1:24,3:27:99:274,0,474	0/1:22,3:21:99:181,0,306	1/1:15,2:16:2.15:53,2,0	0/0:61,2:55:4.02:0,4,195	0/1:12,5:17:40.68:111,0,41	0/0:20,0:17:45.14:0,45,1558	0/0:59,0:58:99:0,141,4720	0/1:22,8:30:99:440,0,150	0/1:19,12:30:99:849,0,221	0/1:12,5:17:99:168,0,171	0/1:18,2:16:99:154,0,322
chr10	35936989	.	T	TGGC	8320.34	PASS	AB=0.825;AC=30;AF=0.536;AN=56;BaseQRankSum=13.053;DP=928;FS=0.000;HRun=0;HaplotypeScore=408.5616;InbreedingCoeff=-0.1657;MQ=34.94;MQ0=58;MQRankSum=-9.801;QD=11.95;ReadPosRankSum=3.281;VQSLOD=3.1218;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:21,7:26:5.56:150,0,6	0/1:7,5:12:28.73:273,0,29	0/0:54,0:12:36.08:0,36,521	0/0:58,0:17:45.15:0,45,771	1/1:9,4:13:2.92:8,3,0	1/1:14,3:17:20.76:219,21,0	0/1:37,8:44:99:473,0,117	0/1:34,0:33:99:256,0,792	0/1:26,11:37:50.63:612,0,51	0/1:36,3:34:99:404,0,136	0/1:12,4:14:22.77:28,0,23	0/0:39,0:37:78.21:0,78,1255	1/1:23,10:31:16.03:733,16,0	0/1:37,21:56:34.06:986,0,34	0/1:28,10:36:6.92:418,0,7	0/1:24,11:35:20.51:739,0,21	0/1:13,6:24:91.85:361,0,92	0/1:24,3:27:99:391,0,197	0/1:23,4:22:99:377,0,164	1/1:14,3:16:7.37:73,7,0	0/1:72,1:63:35.48:35,0,158	1/1:12,6:19:6.59:139,7,0	0/0:19,0:16:42.13:0,42,688	0/0:61,0:59:99:0,156,2575	1/1:20,11:31:19.83:301,20,0	0/1:25,6:30:20.03:621,0,20	1/1:14,5:19:28.83:368,29,0	0/1:15,4:16:35.24:355,0,35
chr10	35936991	.	T	TGGC	5933.17	PASS	AB=0.956;AC=24;AF=0.429;AN=56;BaseQRankSum=10.812;DP=924;FS=5.362;HRun=0;HaplotypeScore=421.0149;InbreedingCoeff=-0.3739;MQ=34.15;MQ0=57;MQRankSum=-6.902;QD=9.73;ReadPosRankSum=3.792;VQSLOD=2.9068;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:26:70.36:74,0,70	0/1:10,1:12:39.28:240,0,39	0/0:54,0:12:21.06:0,21,331	0/0:56,0:17:45.15:0,45,766	1/1:14,0:13:2.92:8,3,0	0/1:15,2:17:19.25:183,0,19	0/1:42,1:43:99:128,0,242	0/1:35,0:34:95.67:96,0,557	0/1:39,0:38:47.04:517,0,47	0/1:40,0:36:99:400,0,103	0/0:16,0:14:5.32:0,5,31	0/0:34,0:32:75.20:0,75,1212	0/1:34,0:32:99:363,0,145	0/1:55,2:56:99:656,0,154	0/1:37,1:36:99:251,0,165	0/1:35,0:35:27.83:600,0,28	0/1:22,0:22:21.83:367,0,22	0/1:24,1:27:99:370,0,235	0/1:26,1:22:99:256,0,176	0/1:18,1:18:26.85:27,0,35	0/0:65,3:63:22.12:0,22,250	0/1:16,2:18:16.72:44,0,17	0/0:20,0:17:42.13:0,42,688	0/0:60,0:58:99:0,146,2491	0/1:30,0:30:67.42:148,0,67	0/1:30,1:31:94.85:484,0,95	1/1:18,1:19:5.08:263,5,0	1/1:20,0:16:21.75:460,22,0
chr10	35936994	.	GT	G	3711.78	PASS	AB=0.907;AC=25;AF=0.446;AN=56;BaseQRankSum=12.928;DP=877;FS=1.362;HRun=1;HaplotypeScore=379.4152;InbreedingCoeff=-0.2124;MQ=34.82;MQ0=56;MQRankSum=-9.095;QD=5.96;ReadPosRankSum=5.635;VQSLOD=0.3748;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:23,5:26:60.29:130,0,60	0/1:11,2:13:29.51:135,0,30	0/0:47,0:8:21.07:0,21,272	0/0:55,0:17:51.16:0,51,674	0/1:10,3:12:1.12:15,0,1	1/1:11,4:15:18.57:155,19,0	0/1:35,7:41:83.41:83,0,242	0/0:27,0:26:13.45:0,13,455	1/1:31,5:35:47.05:457,47,0	0/1:34,4:33:91.31:251,0,91	0/0:10,3:11:5.18:0,5,34	0/0:34,0:32:72.22:0,72,978	0/1:32,1:31:74.41:141,0,74	0/1:52,5:54:99:267,0,181	0/1:34,3:35:38.24:234,0,38	1/1:30,4:34:9.93:467,10,0	0/1:20,1:21:54.95:168,0,55	0/1:23,2:25:99:158,0,271	0/1:24,1:20:89.32:89,0,129	0/1:14,3:16:24.18:34,0,24	0/1:66,6:62:11.44:11,0,175	0/1:17,1:18:15.39:15,0,73	0/0:20,0:17:43.96:0,44,626	0/0:55,1:55:99:0,125,1974	0/1:27,4:32:36.03:247,0,36	0/1:27,4:30:21.45:296,0,21	0/1:18,0:18:31.90:49,0,32	1/1:11,7:14:24.16:308,24,0
chr10	35938662	.	GCA	G	18290.59	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=14.220;DP=749;FS=0.900;HRun=0;HaplotypeScore=127.3522;InbreedingCoeff=0.9907;MQ=92.37;MQ0=2;MQRankSum=-5.548;QD=39.25;ReadPosRankSum=3.212;VQSLOD=6.5143;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,35:35:93.31:1370,93,0	1/1:0,4:4:9.03:132,9,0	0/0:40,0:40:99:0,111,1994	0/0:33,0:32:87.25:0,87,1539	0/0:21,0:21:57.20:0,57,1067	1/1:1,26:27:69.23:1016,69,0	1/1:0,27:27:75.25:1104,75,0	1/1:1,30:31:90.27:1285,90,0	0/0:39,0:39:99:0,111,2078	1/1:1,29:29:87.29:1271,87,0	1/1:0,16:16:42.14:618,42,0	0/0:32,0:32:96.33:0,96,1798	1/1:1,26:27:63.21:928,63,0	1/1:0,30:30:84.28:1237,84,0	1/1:0,36:36:99:1590,108,0	0/0:35,0:35:99:0,105,1967	0/0:30,0:30:87.30:0,87,1618	1/1:0,21:21:48.16:699,48,0	1/1:1,23:24:69.23:1009,69,0	1/1:1,15:16:39.13:574,39,0	1/1:1,40:41:99:1636,112,0	1/1:1,12:13:27.09:397,27,0	0/0:17,0:17:51.17:0,51,955	0/0:36,0:36:99:0,105,1967	1/1:0,18:18:42.14:618,42,0	1/1:0,30:29:87.28:1260,87,0	1/1:0,24:24:69.23:1015,69,0	1/1:3,13:16:36.12:530,36,0
chr10	35938854	.	TC	T	21481.11	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=9.280;DP=629;FS=6.431;HRun=3;HaplotypeScore=106.5277;InbreedingCoeff=0.9999;MQ=73.93;MQ0=0;MQRankSum=-4.614;QD=39.56;ReadPosRankSum=2.854;VQSLOD=3.8918;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,36:36:99:1444,105,0	1/1:0,16:16:48.16:671,48,0	0/0:13,0:13:39.07:0,39,567	0/0:21,0:20:54.18:0,54,809	1/1:0,26:26:75.21:1027,75,0	1/1:0,16:16:42.11:566,42,0	1/1:0,24:24:57.19:797,57,0	1/1:0,38:38:99:1537,114,0	1/1:0,27:27:81.20:1108,81,0	1/1:1,32:33:96.32:1342,96,0	1/1:0,12:12:36.12:500,36,0	0/0:17,0:17:51.11:0,51,762	1/1:0,16:16:45.15:623,45,0	1/1:0,17:17:51.17:713,51,0	1/1:0,19:19:57.07:744,57,0	1/1:0,24:24:66.22:918,66,0	1/1:0,25:25:75.25:1048,75,0	1/1:0,19:19:51.17:713,51,0	1/1:0,12:12:36.12:500,36,0	1/1:0,26:26:72.20:984,72,0	1/1:0,52:52:99:2013,144,0	1/1:0,15:15:45.15:629,45,0	0/0:18,0:18:54.17:0,54,832	0/0:17,0:17:51.16:0,51,790	1/1:1,15:16:36.12:503,36,0	1/1:0,25:25:75.25:1047,75,0	1/1:0,27:27:81.27:1132,81,0	1/1:0,22:22:66.22:922,66,0
chr10	35939170	.	G	GAAA	14009.52	PASS	AB=1.000;AC=47;AF=0.839;AN=56;BaseQRankSum=4.060;DP=378;FS=1.977;HRun=6;HaplotypeScore=77.4369;InbreedingCoeff=0.8205;MQ=63.07;MQ0=0;MQRankSum=-6.549;QD=40.14;ReadPosRankSum=2.916;VQSLOD=4.0955;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,16:19:39.13:784,39,0	1/1:0,8:8:18.06:375,18,0	0/1:14,0:12:3.06:3,0,172	0/0:9,0:6:6.02:0,6,76	1/1:3,0:21:45.11:618,45,0	1/1:1,13:14:36.12:726,36,0	1/1:3,12:15:36.12:746,36,0	1/1:5,18:26:62.84:772,63,0	1/1:3,0:17:48.12:670,48,0	1/1:3,11:14:36.12:744,36,0	1/1:1,15:18:36.07:702,36,0	0/0:5,0:5:15.04:0,15,195	1/1:1,10:12:30.07:583,30,0	1/1:2,10:12:27.09:563,27,0	1/1:0,6:8:18.06:356,18,0	1/1:2,1:14:27.09:391,27,0	1/1:1,1:19:30.10:450,30,0	1/1:0,12:12:30.10:625,30,0	1/1:1,8:13:32.97:489,33,0	1/1:0,13:12:30.10:624,30,0	1/1:1,2:4:3.01:62,3,0	1/1:0,7:7:18.06:377,18,0	0/0:7,0:7:17.64:0,18,222	0/0:8,0:8:21.07:0,21,298	1/1:2,22:25:66.14:1289,66,0	1/1:3,15:21:57.10:1010,57,0	1/1:2,14:17:42.14:864,42,0	1/1:0,4:6:9.03:188,9,0
chr10	35939424	.	A	AC	21827.08	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=10.246;DP=712;FS=4.740;HRun=1;HaplotypeScore=117.1006;InbreedingCoeff=0.9969;MQ=80.45;MQ0=0;MQRankSum=-5.170;QD=37.12;ReadPosRankSum=1.507;VQSLOD=4.5732;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,38:39:99:1442,107,0	1/1:0,9:9:24.08:323,24,0	0/0:18,0:18:23.93:0,24,438	0/0:20,0:20:42.25:0,42,464	1/1:2,16:18:30.10:402,30,0	1/1:0,18:18:45.15:628,45,0	1/1:0,26:26:72.24:1008,72,0	1/1:3,31:34:87.72:1180,88,0	1/1:0,25:25:72.24:997,72,0	1/1:0,30:30:90.30:1263,90,0	1/1:1,8:9:18.06:254,18,0	0/0:34,0:34:96.31:0,96,1244	1/1:3,25:28:81.23:1100,81,0	1/1:0,38:38:99:1405,102,0	1/1:1,31:32:87.29:1216,87,0	1/1:0,24:24:60.20:835,60,0	1/1:0,31:31:84.28:1173,84,0	1/1:2,21:23:60.20:840,60,0	1/1:0,26:26:78.21:1048,78,0	1/1:1,21:22:60.16:821,60,0	1/1:2,50:52:99:1921,138,0	1/1:0,16:16:48.16:677,48,0	0/0:13,0:13:33.06:0,33,409	0/0:37,2:39:63.34:0,63,1280	1/1:0,18:18:48.12:650,48,0	1/1:1,33:34:96.27:1305,96,0	1/1:0,25:25:62.57:875,63,0	1/1:0,11:11:33.11:462,33,0
chr10	35940733	.	C	CTTCT	6322.09	PASS	AB=0.954;AC=40;AF=0.714;AN=56;BaseQRankSum=8.614;DP=484;FS=135.008;HRun=0;HaplotypeScore=138.3162;InbreedingCoeff=0.4403;MQ=49.92;MQ0=10;MQRankSum=-6.646;QD=21.88;ReadPosRankSum=-1.231;VQSLOD=1.8351;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:23:50.94:609,51,0	1/1:5,0:4:5.92:70,6,0	0/0:43,0:24:64.94:0,65,1009	0/0:47,0:29:25.06:0,25,1051	0/1:11,0:11:2.33:239,0,2	1/1:8,0:8:3.92:226,4,0	1/1:11,0:11:27.91:297,28,0	0/1:32,0:32:99:447,0,294	1/1:13,0:13:14.42:419,14,0	0/1:14,0:14:8.90:300,0,9	1/1:3,0:3:8.94:87,9,0	0/0:53,0:51:99:0,144,2736	1/1:9,0:9:26.87:349,27,0	1/1:12,0:12:11.94:105,12,0	1/1:21,0:21:35.10:351,35,0	1/1:15,1:16:41.66:540,42,0	1/1:8,0:8:14.05:303,14,0	0/1:10,0:10:30.90:57,0,31	0/1:8,4:9:26.38:279,0,26	1/1:10,0:10:21.06:262,21,0	1/1:8,0:8:8.95:70,9,0	1/1:14,0:13:18:184,18,0	0/0:25,0:25:57.17:0,57,1037	0/0:27,0:27:44.67:0,45,1014	1/1:13,0:13:34.24:390,34,0	0/1:15,0:14:99:375,0,108	1/1:14,0:14:20.78:279,21,0	1/1:6,0:6:8.97:84,9,0
chr10	35940745	.	CTTCA	C	3476.89	PASS	AB=0.909;AC=39;AF=0.722;AN=54;BaseQRankSum=11.304;DP=415;FS=85.568;HRun=0;HaplotypeScore=122.6796;InbreedingCoeff=0.4200;MQ=43.74;MQ0=14;MQRankSum=-7.440;QD=16.32;ReadPosRankSum=2.412;VQSLOD=0.0894;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:12,3:15:29.78:286,30,0	0/1:1,2:3:6.49:52,0,6	0/0:43,0:19:30.25:0,30,798	0/0:46,1:28:33.33:0,33,894	1/1:9,0:9:17.79:190,18,0	1/1:5,1:6:3.79:100,4,0	1/1:6,0:6:9.74:69,10,0	0/1:22,0:22:77.41:268,0,77	1/1:6,1:7:17.92:180,18,0	1/1:9,1:10:16.27:201,16,0	1/1:2,0:2:2.94:18,3,0	0/0:51,0:49:81.55:0,82,3161	1/1:6,2:8:23.79:270,24,0	1/1:1,9:10:2.84:58,3,0	1/1:0,15:15:18.06:325,18,0	1/1:13,1:14:14.97:295,15,0	1/1:8,0:8:5.53:144,6,0	1/1:2,7:9:2.06:54,2,0	0/1:17,1:12:29.38:77,0,29	0/1:10,0:10:0.34:188,0,0	./.	1/1:2,8:9:6.02:105,6,0	0/0:31,0:32:36.86:0,37,1300	0/0:28,0:28:6.11:0,6,1018	1/1:8,1:9:20.81:216,21,0	0/1:8,0:7:4.75:122,0,5	1/1:0,10:10:9.03:148,9,0	1/1:0,4:4:6.02:111,6,0
chr10	35940769	.	CTTCA	C	2110.25	PASS	AB=0.992;AC=40;AF=0.769;AN=52;BaseQRankSum=11.315;DP=303;FS=60.839;HRun=0;HaplotypeScore=101.5013;InbreedingCoeff=0.3606;MQ=48.54;MQ0=6;MQRankSum=-7.416;QD=14.97;ReadPosRankSum=2.340;VQSLOD=0.7222;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,0:7:16.03:128,16,0	1/1:1,0:1:3.01:58,3,0	0/0:44,0:25:57.11:0,57,1157	0/0:39,0:27:42.59:0,43,997	1/1:4,0:4:1.78:5,2,0	1/1:3,0:3:9.03:120,9,0	1/1:4,0:4:11.88:102,12,0	0/1:12,0:12:78.12:78,0,95	1/1:5,1:6:14.91:144,15,0	1/1:3,0:3:9:117,9,0	./.	0/0:49,0:47:74.43:0,74,2939	1/1:6,0:6:17.85:197,18,0	1/1:7,0:7:5.75:68,6,0	1/1:9,0:9:18.06:323,18,0	1/1:8,2:10:3.08:187,3,0	1/1:2,0:2:2.94:18,3,0	1/1:3,0:4:5.52:73,6,0	0/1:4,0:4:10.97:80,0,11	0/1:7,0:7:19.19:40,0,19	./.	1/1:7,0:7:6.02:107,6,0	0/0:29,0:29:45.51:0,46,1868	0/1:29,1:30:27.36:27,0,1259	1/1:3,0:3:5.97:73,6,0	1/1:4,0:3:8.38:74,8,0	1/1:4,0:4:9.03:146,9,0	1/1:4,0:4:6.02:111,6,0
chr10	35940869	.	CTTCA	C	2338.57	PASS	AB=0.987;AC=24;AF=0.429;AN=56;BaseQRankSum=6.563;DP=576;FS=0.937;HRun=0;HaplotypeScore=210.8322;InbreedingCoeff=-0.2186;MQ=39.24;MQ0=29;MQRankSum=-5.152;QD=6.12;ReadPosRankSum=-1.933;VQSLOD=2.6394;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:7.69:0,8,116	0/1:9,0:9:70.76:78,0,71	0/0:29,0:6:11.51:0,12,227	0/0:39,0:20:6.85:0,7,219	0/1:17,1:18:20.53:106,0,21	0/1:11,0:9:28.57:44,0,29	0/1:12,0:10:25.54:26,0,29	0/0:6,0:1:3.01:0,3,41	1/1:4,1:5:12.03:133,12,0	0/1:43,0:40:99:329,0,117	0/1:19,0:19:28.45:103,0,28	0/1:63,0:62:33.26:33,0,758	0/1:11,0:10:34.80:35,0,47	0/0:16,0:15:1.54:0,2,54	0/1:20,0:17:2.54:54,0,3	1/1:11,2:13:20.46:217,20,0	1/1:4,0:4:2.88:36,3,0	0/1:6,1:6:26.15:26,0,27	1/1:7,0:4:7.91:100,8,0	0/1:40,0:41:58.43:527,0,58	0/1:8,0:7:21.43:32,0,21	0/1:27,0:27:19.96:201,0,20	0/0:37,0:37:46.68:0,47,807	0/0:46,0:46:76.95:0,77,1404	0/1:35,0:35:11.71:346,0,12	0/1:23,0:21:45.44:76,0,45	0/0:10,0:9:18.40:0,18,108	0/1:6,0:5:2.46:2,0,10
chr10	35940870	.	TTCAA	T	3502.01	PASS	AB=0.874;AC=23;AF=0.411;AN=56;BaseQRankSum=7.566;DP=585;FS=39.345;HRun=0;HaplotypeScore=212.2691;InbreedingCoeff=-0.0866;MQ=37.62;MQ0=29;MQRankSum=-3.007;QD=8.93;ReadPosRankSum=-1.315;VQSLOD=1.6351;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:20.35:0,20,220	0/1:8,1:9:67.87:68,0,91	0/0:27,1:5:10.22:0,10,149	0/1:37,1:19:48.91:49,0,61	0/1:13,6:19:15.22:212,0,15	0/1:11,0:9:16.47:16,0,29	0/1:12,0:10:14.49:14,0,34	0/0:6,0:1:2.98:0,3,21	1/1:5,0:5:11.21:80,11,0	0/1:18,24:40:87.54:539,0,88	0/1:17,4:21:36.21:164,0,36	0/1:62,2:63:58.50:59,0,529	0/0:11,0:10:5.45:0,5,104	0/0:16,0:15:24.31:0,24,130	0/0:21,0:18:22.23:0,22,145	1/1:13,2:15:7.49:169,7,0	1/1:1,3:4:2.61:57,3,0	1/1:6,1:6:3.35:59,3,0	1/1:2,5:4:11.95:115,12,0	0/1:29,13:42:47.39:899,0,47	0/1:8,0:7:16.03:16,0,27	0/1:22,6:28:30.24:229,0,30	0/0:36,1:37:33.35:0,33,455	0/0:47,0:47:99:0,108,965	0/1:27,7:35:20.28:555,0,20	0/1:21,3:22:38.85:203,0,39	0/0:10,0:9:23.45:0,23,156	0/0:6,0:5:5.61:0,6,28
chr10	35940878	.	A	ATCCT	1106.16	PASS	AB=0.987;AC=18;AF=0.321;AN=56;BaseQRankSum=1.397;DP=700;FS=55.908;HRun=0;HaplotypeScore=277.7413;InbreedingCoeff=-0.3763;MQ=37.17;MQ0=34;MQRankSum=-2.720;QD=2.67;ReadPosRankSum=-2.509;VQSLOD=0.5337;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:13.05:0,13,101	0/1:12,0:11:56.59:57,0,161	0/0:34,0:7:8.24:0,8,114	0/0:42,0:19:29.93:0,30,324	0/1:29,0:29:28.37:28,0,160	0/1:16,0:14:35.81:36,0,190	0/1:17,0:12:28.47:28,0,109	0/0:7,0:2:4.83:0,5,49	0/1:6,0:6:5.34:5,0,33	0/1:50,0:44:99:181,0,563	0/1:30,0:29:32.01:32,0,217	0/0:72,0:70:30.71:0,31,760	0/1:11,0:10:47.85:48,0,195	0/1:17,1:17:51.75:52,0,173	0/1:22,0:19:99:117,0,156	0/1:15,2:16:39.12:224,0,39	0/0:4,0:4:4.83:0,5,19	0/0:7,0:6:7.84:0,8,98	0/1:9,0:4:14.30:20,0,14	0/1:52,1:53:99:143,0,759	1/1:8,0:7:2.76:20,3,0	0/1:38,1:39:60.92:61,0,246	0/0:42,0:41:50.58:0,51,839	0/0:47,0:47:85.61:0,86,1202	0/1:41,0:41:99:143,0,458	0/1:36,0:32:68.14:68,0,428	0/0:13,0:11:29.95:0,30,340	0/0:6,0:5:8.90:0,9,76
chr10	35940891	.	TCCTTCCTTCCAC	T	4345.52	PASS	AB=0.984;AC=32;AF=0.571;AN=56;BaseQRankSum=0.040;DP=830;FS=0.759;HRun=0;HaplotypeScore=373.0159;InbreedingCoeff=-0.3098;MQ=33.09;MQ0=55;MQRankSum=-1.376;QD=6.23;ReadPosRankSum=3.154;VQSLOD=2.4819;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:11:20.79:129,21,0	0/1:16,0:15:99:113,0,174	0/0:48,0:6:14.95:0,15,188	0/0:45,0:14:14.63:0,15,155	0/0:39,0:39:33.34:0,33,535	0/1:16,0:14:8.04:105,0,8	1/1:21,0:15:22:196,22,0	0/1:18,0:6:27.09:82,0,27	1/1:8,0:8:17.70:271,18,0	0/1:53,0:46:99:373,0,250	0/1:38,0:37:55.50:191,0,55	0/1:79,0:77:25.29:25,0,1324	0/1:11,0:10:12.27:61,0,12	1/1:18,0:17:29.45:214,29,0	1/1:22,0:19:36.94:271,37,0	0/1:11,8:18:99:174,0,243	0/1:4,0:4:11.85:12,0,56	0/1:8,0:7:11.07:11,0,26	0/1:13,0:6:21.57:22,0,62	0/1:71,0:71:99:403,0,664	1/1:9,0:6:9.80:51,10,0	0/1:49,0:48:99:403,0,208	0/1:50,0:49:99:283,0,596	0/1:49,0:49:91.56:92,0,1386	0/1:50,0:50:99:450,0,270	0/1:46,0:42:99:268,0,146	0/1:13,0:11:87.55:106,0,88	1/1:6,0:5:7.94:40,8,0
chr10	35940895	.	TCCTTCCAC	T	5808.52	PASS	AB=0.986;AC=33;AF=0.589;AN=56;BaseQRankSum=-1.827;DP=852;FS=19.534;HRun=0;HaplotypeScore=338.3262;InbreedingCoeff=-0.4409;MQ=32.89;MQ0=56;MQRankSum=-0.590;QD=7.27;ReadPosRankSum=2.947;VQSLOD=2.0229;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:11,0:11:12.52:29,0,13	0/1:18,0:17:99:142,0,231	0/0:49,0:6:14.42:0,14,137	0/1:49,0:14:8.26:8,0,53	0/1:45,0:44:9.68:10,0,395	1/1:16,0:14:16.81:125,17,0	1/1:21,0:15:8.31:175,8,0	0/1:15,6:7:2.81:125,0,3	1/1:8,0:8:14.85:216,15,0	0/1:53,0:46:76.75:620,0,77	0/1:38,0:37:45.12:209,0,45	0/1:81,0:79:99:127,0,1207	0/1:11,0:10:8.33:79,0,8	1/1:18,0:17:22.14:275,22,0	0/1:22,0:19:5.60:145,0,6	0/1:19,0:18:99:170,0,216	0/0:4,0:3:2.99:0,3,24	1/1:8,0:7:1.38:81,1,0	0/1:11,0:5:33.45:33,0,41	0/1:73,0:73:99:688,0,515	1/1:8,0:5:0.87:13,1,0	0/1:49,1:49:99:549,0,198	0/1:52,1:52:99:514,0,509	0/1:46,0:46:99:278,0,1024	0/1:50,0:50:99:537,0,223	0/1:50,0:45:99:408,0,124	0/1:13,0:11:34.57:208,0,35	1/1:6,0:5:6.47:43,6,0
chr10	35940899	.	TCCAC	T	4160.51	PASS	AB=0.930;AC=35;AF=0.625;AN=56;BaseQRankSum=-1.134;DP=867;FS=10.717;HRun=0;HaplotypeScore=313.3673;InbreedingCoeff=-0.3341;MQ=32.54;MQ0=62;MQRankSum=-0.140;QD=5.11;ReadPosRankSum=4.832;VQSLOD=0.9027;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:12,0:12:23.62:149,24,0	0/1:17,1:17:86.86:87,0,177	0/0:49,0:6:8.16:0,8,75	0/1:48,0:12:15.49:15,0,30	0/1:43,1:44:28.11:28,0,264	1/1:16,0:14:22.77:134,23,0	1/1:21,0:15:20.60:127,21,0	1/1:19,0:6:14.59:80,15,0	0/1:9,1:10:2.05:121,0,2	0/1:56,0:49:71.45:346,0,71	0/1:38,0:40:28.05:241,0,28	0/1:42,40:80:22.08:22,0,864	1/1:11,0:10:12.61:75,13,0	1/1:18,1:17:30.81:217,31,0	1/1:22,0:19:39.06:234,39,0	0/1:20,0:19:74.55:75,0,181	0/0:4,0:3:2.99:0,3,24	0/1:8,0:7:9.81:41,0,10	0/1:12,0:6:14.72:15,0,20	0/1:70,0:73:99:503,0,342	1/1:9,0:5:8.56:47,9,0	0/1:47,0:49:91.33:342,0,91	0/1:53,1:53:99:312,0,273	0/1:47,0:47:99:105,0,652	0/1:49,1:51:99:405,0,182	0/1:21,28:45:75.02:330,0,75	0/1:12,1:11:16.33:74,0,16	1/1:6,0:5:4.90:38,5,0
chr10	35940954	.	T	TTTAA	391.08	PASS	AB=0.967;AC=7;AF=0.140;AN=50;BaseQRankSum=1.107;DP=556;FS=0.915;HRun=0;HaplotypeScore=225.8675;InbreedingCoeff=0.0452;MQ=29.26;MQ0=30;MQRankSum=-1.368;QD=2.61;ReadPosRankSum=-1.979;VQSLOD=2.4843;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,0:8:2.74:14,3,0	0/0:13,0:12:33.11:0,33,593	0/0:24,0:6:18.04:0,18,283	0/0:22,0:3:9.03:0,9,180	0/0:38,0:36:40.92:0,41,514	0/0:11,0:10:14.26:0,14,186	0/0:11,0:10:8.89:0,9,72	./.	0/0:7,0:7:17.74:0,18,261	0/1:8,0:6:23.60:24,0,95	0/0:26,0:24:27.74:0,28,331	0/0:81,0:80:99:0,171,3030	0/0:6,0:5:6.02:0,6,82	0/0:5,0:5:11.96:0,12,135	0/0:3,0:2:5.98:0,6,56	0/0:9,0:9:17.25:0,17,269	0/0:3,0:3:0.47:0,0,1	0/0:5,0:4:6.49:0,6,88	./.	0/1:45,3:46:99:241,0,795	./.	0/1:32,1:33:51:51,0,698	0/0:43,0:38:71.27:0,71,1120	0/0:72,0:71:99:0,118,2084	0/1:32,1:33:99:132,0,787	0/1:19,1:17:48.59:49,0,303	0/0:11,0:9:26.88:0,27,272	0/0:3,0:3:5.93:0,6,54
chr10	35941032	.	CCATG	C	434.53	PASS	AB=1.000;AC=14;AF=0.350;AN=40;BaseQRankSum=5.033;DP=196;FS=7.033;HRun=0;HaplotypeScore=60.5993;InbreedingCoeff=0.3575;MQ=49.17;MQ0=17;MQRankSum=-2.603;QD=6.69;ReadPosRankSum=0.530;VQSLOD=0.8692;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:6,0:6:4.08:18,4,0	1/1:4,1:5:0.78:122,1,0	0/0:21,0:4:7.21:0,7,75	0/0:22,0:8:0.17:0,0,65	./.	0/0:1,0:1:0.47:0,0,1	./.	./.	0/1:3,0:2:0:0,0,0	0/0:5,0:5:8.83:0,9,57	0/0:2,0:1:0:0,0,0	0/0:29,0:27:22.35:0,22,490	./.	0/0:2,0:1:0.47:0,0,1	0/0:2,0:1:2.60:0,3,10	./.	1/1:2,1:3:7.57:87,8,0	0/0:1,0:1:2.98:0,3,22	./.	1/1:5,1:6:9.85:117,10,0	./.	0/1:8,0:8:3.71:4,0,49	0/0:14,0:13:27.86:0,28,316	0/1:27,0:27:2.64:3,0,232	1/1:0,4:4:12:195,12,0	0/1:3,0:3:9.10:9,0,29	0/0:2,0:2:5.93:0,6,40	./.
chr10	35941200	.	TTCCTTCCTTCCA	T	705.83	PASS	AB=1.000;AC=18;AF=0.321;AN=56;BaseQRankSum=8.672;DP=370;FS=26.642;HRun=0;HaplotypeScore=166.3231;InbreedingCoeff=-0.2054;MQ=36.64;MQ0=15;MQRankSum=-5.712;QD=3.48;ReadPosRankSum=5.783;VQSLOD=1.1047;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:4,13:16:6.02:192,6,0	0/1:5,0:5:25:44,0,25	0/0:4,0:3:9.01:0,9,87	0/0:10,0:5:15.01:0,15,150	0/0:9,0:9:14.71:0,15,94	0/0:12,0:11:17.69:0,18,114	0/0:11,0:11:2.74:0,3,102	0/0:8,0:3:8.87:0,9,62	0/1:9,0:9:21.93:22,0,62	0/1:14,0:12:36.97:37,0,97	0/1:7,0:7:10.41:10,0,77	0/1:51,0:48:19.66:20,0,1588	0/1:14,0:13:35.20:35,0,51	0/1:11,0:11:13.20:96,0,13	0/1:14,0:14:93.28:106,0,93	0/0:19,0:19:14.22:0,14,187	1/1:4,0:4:5.98:53,6,0	0/0:8,0:7:7.83:0,8,118	0/1:11,0:7:65.96:78,0,66	0/1:6,0:6:3.11:3,0,71	0/0:5,0:4:5.92:0,6,42	0/1:7,0:6:10.98:27,0,11	0/0:25,0:24:53.81:0,54,950	0/0:55,0:49:7.51:0,8,1437	0/1:6,0:5:25.03:25,0,42	0/1:17,0:15:68.56:104,0,69	0/1:10,0:9:9.16:9,0,60	0/0:1,0:1:0.47:0,0,1
chr10	35941558	.	TACACACACAC	T	8106.56	PASS	AB=0.664;AC=38;AF=0.731;AN=52;BaseQRankSum=7.657;DP=625;FS=4.035;HRun=0;HaplotypeScore=194.5443;InbreedingCoeff=0.4887;MQ=53.06;MQ0=19;MQRankSum=-7.469;QD=19.12;ReadPosRankSum=1.887;VQSLOD=3.8473;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:30:27.07:0,27,861	1/1:4,8:12:12.04:338,12,0	./.	./.	1/1:10,0:28:16.71:354,17,0	1/1:11,9:20:18.06:517,18,0	0/0:16,3:19:2.59:0,3,66	1/1:32,0:30:8.77:125,9,0	1/1:11,0:20:8.75:209,9,0	1/1:9,13:23:39.93:1048,40,0	1/1:4,7:11:3.01:90,3,0	0/0:15,1:18:33.11:0,33,1414	0/1:8,9:17:13.77:512,0,14	1/1:5,10:17:21.07:607,21,0	1/1:7,16:24:27.09:786,27,0	1/1:17,0:30:12.04:279,12,0	1/1:12,0:20:9.03:194,9,0	0/1:13,8:22:46.48:401,0,46	1/1:11,0:12:3.60:134,4,0	1/1:5,5:10:8.99:182,9,0	1/1:30,0:28:3.47:26,3,0	0/1:10,10:20:0:0,0,0	0/0:10,0:10:21.07:0,21,855	0/0:26,0:29:48.16:0,48,2183	1/1:6,6:12:3.01:90,3,0	1/1:13,1:24:33.58:689,34,0	1/1:10,15:25:42.14:1196,42,0	0/1:4,0:10:53.92:331,0,54
chr10	35942076	.	C	CAGGTG	2061.66	PASS	AB=0.753;AC=24;AF=0.429;AN=56;BaseQRankSum=-5.080;DP=721;FS=3.044;HRun=0;HaplotypeScore=190.7993;InbreedingCoeff=-0.1638;MQ=61.80;MQ0=0;MQRankSum=-6.429;QD=3.53;ReadPosRankSum=-3.298;VQSLOD=2.2524;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:16,0:36:99:159,0,519	0/0:11,0:12:14.85:0,15,366	0/0:8,0:8:24.08:0,24,525	0/0:10,0:10:24.08:0,24,502	1/1:1,0:17:3.01:65,3,0	0/1:19,0:30:99:105,0,668	0/1:53,0:68:99:282,0,1716	0/1:18,0:30:6.63:7,0,543	1/1:1,1:36:8.61:193,9,0	0/1:19,0:30:1.04:1,0,736	0/0:9,0:9:12.04:0,12,183	0/0:27,0:27:80.38:0,80,1639	0/1:17,0:25:99:111,0,549	0/1:30,0:40:99:103,0,974	0/1:19,0:31:99:162,0,637	1/1:0,0:25:12.02:259,12,0	1/1:1,1:28:12.04:258,12,0	0/1:12,0:18:63.98:64,0,444	0/1:11,0:19:52.92:53,0,423	0/1:8,0:12:1.31:1,0,177	0/1:53,0:78:99:189,0,1170	0/0:14,0:20:13.30:0,13,412	0/0:10,0:10:30.06:0,30,643	0/0:41,0:41:99:0,123,2732	0/1:7,0:13:31.36:31,0,240	0/1:13,0:17:62.39:62,0,410	0/1:18,0:23:95.23:95,0,532	0/1:6,0:7:29.81:30,0,193
chr10	35943662	.	TTTC	T	1308.20	PASS	AB=0.646;AC=12;AF=0.231;AN=52;BaseQRankSum=5.443;DP=218;FS=3.661;HRun=0;HaplotypeScore=42.3404;InbreedingCoeff=0.2041;MQ=92.45;MQ0=1;MQRankSum=-7.710;QD=21.45;ReadPosRankSum=-1.932;VQSLOD=2.8521;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,13:13:24.08:408,24,0	0/0:1,1:2:3.01:0,3,74	0/0:33,0:27:67.21:0,67,1482	0/0:28,0:22:49.52:0,50,1146	./.	0/0:3,0:3:0.04:0,0,69	0/1:5,5:10:90.51:91,0,348	0/0:8,0:6:15.51:0,16,307	1/1:0,9:10:20.64:342,21,0	0/1:1,3:4:61.66:148,0,62	0/0:3,0:2:6.02:0,6,142	0/0:14,0:14:42.14:0,42,1033	0/1:3,2:5:43.79:44,0,208	0/0:5,0:5:15.04:0,15,298	0/1:2,1:3:41.97:42,0,139	1/1:0,8:9:12.02:190,12,0	0/1:1,3:4:7.84:99,0,8	./.	0/0:6,0:6:18.04:0,18,349	0/0:2,0:2:6.02:0,6,148	0/0:10,4:14:30.10:0,30,676	0/0:1,1:2:3.01:0,3,74	0/0:13,0:13:39.13:0,39,938	0/0:16,0:16:48.16:0,48,1125	0/0:2,1:3:6.02:0,6,146	0/1:1,2:3:44.12:100,0,44	0/0:2,0:2:6.02:0,6,148	0/0:1,0:1:3.01:0,3,74
chr10	35944203	.	A	ATCTG	30217.82	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=6.035;DP=557;FS=7.306;HRun=0;HaplotypeScore=152.7360;InbreedingCoeff=0.9944;MQ=66.18;MQ0=0;MQRankSum=-11.799;QD=63.89;ReadPosRankSum=3.384;VQSLOD=6.6718;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,28:37:72.25:1841,72,0	1/1:0,10:10:27.09:683,27,0	0/0:12,0:12:35.15:0,35,613	0/0:14,0:14:39.05:0,39,595	1/1:4,21:25:45.07:1227,45,0	1/1:3,21:25:69.24:1856,69,0	1/1:2,16:19:51.18:1393,51,0	1/1:14,16:31:84.28:2100,84,0	1/1:4,14:18:48.16:1283,48,0	1/1:9,17:27:63.21:1545,63,0	1/1:3,8:11:21.06:573,21,0	0/0:17,0:17:48.16:0,48,922	1/1:5,9:16:36.12:968,36,0	1/1:2,17:19:51.18:1363,51,0	1/1:1,15:16:45.15:1202,45,0	1/1:3,21:24:69.24:1857,69,0	1/1:2,17:21:47.96:1302,48,0	1/1:0,5:5:15.05:410,15,0	1/1:7,19:29:84.24:2085,84,0	1/1:4,20:25:51.18:1392,51,0	1/1:1,15:16:29.29:791,29,0	1/1:4,15:19:39.13:1063,39,0	0/0:14,0:14:39.01:0,39,689	0/0:27,0:27:75.24:0,75,1386	1/1:4,20:25:54.19:1419,54,0	1/1:2,20:22:63.22:1686,63,0	1/1:2,19:22:57.20:1547,57,0	1/1:2,9:11:24.08:630,24,0
chr10	35944535	.	T	TA	1758.76	PASS	AC=34;AF=0.773;AN=44;BaseQRankSum=7.636;DP=269;FS=17.846;HRun=0;HaplotypeScore=35.5557;InbreedingCoeff=0.6168;MQ=30.05;MQ0=15;MQRankSum=-4.491;QD=10.79;ReadPosRankSum=-5.899;VQSLOD=0.7767;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:1,2:3:3.01:48,3,0	./.	0/0:19,0:6:18.06:0,18,251	0/0:20,0:10:30.09:0,30,389	1/1:1,6:5:3.01:48,3,0	1/1:1,8:3:3.01:48,3,0	./.	1/1:2,18:10:30.02:422,30,0	1/1:1,6:5:3.01:48,3,0	1/1:0,7:4:12.04:192,12,0	1/1:2,7:3:6.02:86,6,0	0/0:16,0:15:45.15:0,45,629	1/1:2,5:5:9.03:124,9,0	./.	1/1:0,11:3:3.01:48,3,0	1/1:2,5:3:3.01:48,3,0	1/1:2,3:4:6.02:85,6,0	./.	1/1:0,11:5:12.04:186,12,0	1/1:1,14:6:5.95:66,6,0	./.	1/1:1,8:2:2.94:18,3,0	0/0:10,0:10:30.10:0,30,420	0/0:20,0:19:57.19:0,57,797	1/1:2,16:8:17.99:257,18,0	1/1:0,6:2:6.02:95,6,0	1/1:0,12:5:6.02:96,6,0	./.
chr10	35944680	.	T	TGA	22754.60	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=0.120;DP=562;FS=0.903;HRun=0;HaplotypeScore=104.3676;InbreedingCoeff=0.9974;MQ=53.19;MQ0=0;MQRankSum=-3.851;QD=50.57;ReadPosRankSum=1.025;VQSLOD=5.4795;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,21:25:66.23:1252,66,0	1/1:1,7:8:21.07:406,21,0	0/0:17,0:13:39.13:0,39,559	0/0:21,0:17:42.06:0,42,574	1/1:0,13:14:36.12:687,36,0	1/1:1,17:18:54.19:1038,54,0	1/1:3,15:18:48.12:888,48,0	1/1:0,25:25:75.17:1354,75,0	1/1:3,21:24:38.41:1237,38,0	1/1:2,10:12:36.12:669,36,0	1/1:3,10:13:30.10:578,30,0	0/0:33,0:33:96.32:0,96,1450	1/1:0,18:18:54.19:1042,54,0	1/1:2,19:21:57.20:1096,57,0	1/1:4,25:29:75.26:1447,75,0	1/1:1,30:31:75.13:1447,75,0	1/1:3,23:26:63.22:1206,63,0	1/1:2,16:18:51.17:968,51,0	1/1:3,20:23:63.16:1145,63,0	1/1:2,15:17:45.15:868,45,0	1/1:2,30:33:84.29:1621,84,0	1/1:0,8:8:24.08:463,24,0	0/0:15,0:15:45.14:0,45,668	0/0:26,0:26:78.25:0,78,1166	1/1:4,7:11:21.07:405,21,0	1/1:2,9:13:36.09:627,36,0	1/1:2,24:27:75.26:1443,75,0	1/1:0,15:15:45.15:868,45,0
chr10	35944851	.	CT	C	18948.89	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=8.571;DP=696;FS=0.386;HRun=3;HaplotypeScore=87.0649;InbreedingCoeff=0.9909;MQ=59.42;MQ0=1;MQRankSum=-3.488;QD=32.78;ReadPosRankSum=3.936;VQSLOD=5.1327;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,50:53:99:1640,138,0	1/1:0,4:4:12.04:149,12,0	0/0:26,0:23:54.16:0,54,716	0/0:24,3:23:18.67:0,19,779	1/1:1,14:15:32.60:388,33,0	1/1:2,20:22:63.19:768,63,0	1/1:0,31:31:81.20:985,81,0	1/1:1,24:23:63.13:728,63,0	1/1:3,30:33:90.23:1083,90,0	1/1:2,27:29:87.24:1045,87,0	1/1:0,13:13:33.10:408,33,0	0/0:24,0:24:72.22:0,72,1001	1/1:1,27:28:72.14:856,72,0	1/1:0,20:20:57.18:705,57,0	1/1:3,35:38:99:1303,108,0	1/1:1,29:30:87.22:1057,87,0	1/1:2,34:36:99:1272,105,0	1/1:3,29:32:90.26:1099,90,0	1/1:4,13:17:37.67:536,38,0	1/1:4,16:20:48.15:593,48,0	1/1:3,41:43:99:1419,117,0	1/1:2,19:21:49.05:616,49,0	0/0:21,0:21:60.20:0,60,863	0/0:20,0:20:60.20:0,60,863	1/1:1,13:14:36.11:434,36,0	1/1:1,16:17:51.16:630,51,0	1/1:2,24:26:72.19:863,72,0	1/1:1,9:10:30.09:371,30,0
chr10	35944925	.	TTAC	T	1311.55	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-2.899;DP=592;FS=4.242;HRun=0;HaplotypeScore=193.2233;InbreedingCoeff=0.8988;MQ=62.37;MQ0=0;MQRankSum=-1.723;QD=39.74;ReadPosRankSum=-5.495;VQSLOD=2.5871;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:9,24:33:87.21:1406,87,0	0/0:9,0:9:18.15:0,18,72	0/0:21,0:21:63.19:0,63,1176	0/0:10,0:9:24.07:0,24,360	0/0:15,0:15:34.34:0,34,159	0/0:22,0:22:54.63:0,55,245	0/0:14,0:14:33.02:0,33,171	0/0:28,0:28:18.16:0,18,246	0/0:24,0:24:55.68:0,56,235	0/0:22,0:22:24.53:0,25,186	0/0:18,0:18:26.63:0,27,127	0/0:20,0:20:60.21:0,60,1265	0/0:13,0:13:21.83:0,22,91	0/0:17,0:17:33.51:0,34,133	0/0:28,0:28:62.06:0,62,288	0/0:24,0:24:42.76:0,43,213	0/0:34,0:34:63.34:0,63,306	0/0:27,0:27:41.98:0,42,209	0/0:29,0:29:21.02:0,21,154	0/0:26,0:26:31.55:0,32,177	0/0:18,0:18:16.04:0,16,115	0/0:16,0:16:8.13:0,8,71	0/0:20,0:20:54.09:0,54,1039	0/0:15,0:15:45.13:0,45,898	0/0:13,0:13:31.96:0,32,140	0/0:21,0:21:55.10:0,55,237	0/0:42,0:42:98.32:0,98,426	0/0:13,0:13:31.22:0,31,123
chr10	35944927	.	AC	A	17575.84	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=10.382;DP=592;FS=3.894;HRun=1;HaplotypeScore=113.9875;InbreedingCoeff=0.9969;MQ=62.44;MQ0=0;MQRankSum=-3.277;QD=34.87;ReadPosRankSum=1.957;VQSLOD=4.6293;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:36,0:36:46.17:182,46,0	1/1:1,8:9:24.07:314,24,0	0/0:22,0:22:60.05:0,60,839	0/0:10,0:9:17.21:0,17,268	1/1:0,12:12:33.11:457,33,0	1/1:3,19:22:66.13:841,66,0	1/1:3,11:14:28.73:498,29,0	1/1:10,18:28:68.44:898,68,0	1/1:2,21:23:69.18:915,69,0	1/1:3,19:22:66.16:852,66,0	1/1:2,16:18:51.07:651,51,0	0/0:20,0:20:60.17:0,60,905	1/1:4,9:13:36.06:443,36,0	1/1:4,13:17:51.11:652,51,0	1/1:4,23:27:78.20:1020,78,0	1/1:3,21:24:72.21:943,72,0	1/1:4,30:34:99:1319,102,0	1/1:8,20:28:78.19:1014,78,0	1/1:2,27:29:87.15:1068,87,0	1/1:2,23:25:66.19:873,66,0	1/1:2,16:18:54.15:707,54,0	1/1:6,10:16:48.05:560,48,0	0/0:20,0:20:54.14:0,54,795	0/0:16,0:16:45.13:0,45,688	1/1:1,12:13:36.11:478,36,0	1/1:0,21:21:62.42:837,62,0	1/1:7,34:41:99:1548,120,0	1/1:1,13:14:39.10:507,39,0
chr10	35945324	.	C	CAT	1022.57	PASS	AB=0.759;AC=4;AF=0.071;AN=56;BaseQRankSum=8.161;DP=706;FS=19.105;HRun=0;HaplotypeScore=98.7300;InbreedingCoeff=-0.0850;MQ=52.71;MQ0=69;MQRankSum=-1.552;QD=9.83;ReadPosRankSum=0.147;VQSLOD=1.6887;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:36:87.29:0,87,1319	0/0:13,0:13:23.88:0,24,339	0/0:64,0:9:5.42:0,5,111	0/0:79,0:18:18.11:0,18,272	0/1:10,13:22:51.64:199,0,52	0/0:19,0:19:36.81:0,37,528	0/0:24,0:24:35.71:0,36,545	0/0:32,0:29:79.67:0,80,1045	0/1:20,0:24:99:400,0,181	0/0:18,0:15:41.81:0,42,587	0/0:17,0:16:24.07:0,24,346	0/0:16,0:16:42.14:0,42,630	0/0:13,0:13:30.53:0,31,388	0/0:14,0:12:18.06:0,18,275	0/0:9,0:8:12.04:0,12,186	0/1:27,2:29:99:404,0,267	0/1:11,15:26:99:129,0,235	0/0:13,0:10:27.09:0,27,375	0/0:21,0:18:54.18:0,54,787	0/0:29,0:26:48.11:0,48,714	0/0:45,0:43:89.15:0,89,1219	0/0:21,0:21:29.64:0,30,442	0/0:15,0:14:27.09:0,27,414	0/0:29,0:28:63.01:0,63,956	0/0:10,0:10:11.88:0,12,183	0/0:22,0:21:63.20:0,63,916	0/0:25,0:23:45.10:0,45,611	0/0:14,0:14:35.82:0,36,450
chr10	35945724	.	C	CTTTG	25432.90	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=10.233;DP=507;FS=3.137;HRun=0;HaplotypeScore=113.1659;InbreedingCoeff=0.9936;MQ=75.84;MQ0=0;MQRankSum=-12.372;QD=63.27;ReadPosRankSum=0.004;VQSLOD=6.9211;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,21:29:72.25:1780,72,0	1/1:1,9:10:27.09:679,27,0	0/0:19,0:19:54.18:0,54,966	0/0:12,0:12:30.10:0,30,522	1/1:7,18:27:51.17:1156,51,0	1/1:3,15:18:48.16:1176,48,0	1/1:8,14:22:54.16:1369,54,0	1/1:12,11:24:60.21:1521,60,0	1/1:5,6:11:33.08:794,33,0	1/1:0,13:13:39.13:1039,39,0	1/1:2,17:21:60.21:1463,60,0	0/0:19,0:19:54.11:0,54,908	1/1:2,12:14:42.14:1108,42,0	1/1:3,9:12:30.10:757,30,0	1/1:2,19:22:57.19:1388,57,0	1/1:5,12:17:51.18:1285,51,0	1/1:5,11:18:39.13:988,39,0	1/1:4,5:9:15.05:400,15,0	1/1:7,8:17:45.14:1107,45,0	1/1:3,14:19:45.15:1094,45,0	1/1:4,22:27:63.21:1575,63,0	1/1:1,16:17:48.16:1234,48,0	0/0:26,0:26:69.24:0,69,1288	0/0:29,0:28:84.29:0,84,1568	1/1:0,9:10:27.09:719,27,0	1/1:3,13:18:45.15:1122,45,0	1/1:4,14:19:45.15:1199,45,0	1/1:2,6:8:18.06:480,18,0
chr10	35945808	.	TTG	T	265.41	PASS	AB=0.988;AC=20;AF=0.400;AN=50;BaseQRankSum=5.574;DP=533;FS=5.716;HRun=0;HaplotypeScore=161.0212;InbreedingCoeff=0.2131;MQ=57.42;MQ0=17;MQRankSum=-1.246;QD=1.04;ReadPosRankSum=-2.089;VQSLOD=1.7307;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:35,1:34:8.72:63,9,0	0/0:9,0:9:2.98:0,3,22	./.	./.	1/1:18,0:18:2.13:15,2,0	0/0:20,0:19:3.32:0,3,59	0/0:28,0:27:5.99:0,6,50	0/0:16,0:13:5.12:0,5,24	0/0:18,0:18:2.65:0,3,39	0/0:30,0:29:26.88:0,27,234	0/0:12,0:11:2.97:0,3,20	1/1:12,2:15:11.46:63,11,0	0/1:16,0:16:9.52:10,0,37	0/1:15,0:15:13.63:15,0,14	0/1:20,0:20:4.66:5,0,37	0/1:16,2:17:4.89:66,0,5	0/0:22,0:21:8.53:0,9,58	0/1:13,0:10:1.90:2,0,83	0/0:26,0:25:7.19:0,7,44	0/1:10,0:10:4.40:4,0,18	./.	0/1:31,0:29:0.84:1,0,30	1/1:14,0:14:11.71:75,12,0	1/1:28,0:28:10.90:81,11,0	0/0:25,0:25:2.59:0,3,87	0/0:21,0:21:23.83:0,24,199	0/1:19,0:18:4.59:5,0,47	1/1:3,0:2:2.37:8,2,0
chr10	35945854	.	GCGCGCGCGCGCGTGCGCGTGCACA	G	8565.84	PASS	AB=0.871;AC=31;AF=0.620;AN=50;BaseQRankSum=4.003;DP=356;FS=4.750;HRun=0;HaplotypeScore=171.3504;InbreedingCoeff=0.2017;MQ=46.07;MQ0=17;MQRankSum=-5.806;QD=35.40;ReadPosRankSum=2.059;VQSLOD=3.2422;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:9,1:10:0.94:186,1,0	./.	0/0:3,0:2:6.02:0,6,128	0/0:7,0:2:1.01:0,1,59	1/1:5,3:8:6.96:196,7,0	1/1:12,1:11:9.01:378,9,0	1/1:14,3:16:6.42:216,6,0	0/0:11,0:8:8.88:0,9,54	1/1:7,1:8:12.93:403,13,0	0/1:10,5:14:99:985,0,173	./.	0/0:13,0:13:30.10:0,30,2216	0/1:11,3:14:12.29:745,0,12	0/1:8,2:10:13.10:546,0,13	1/1:14,0:14:9.49:522,9,0	1/1:8,2:9:9.03:433,9,0	1/1:4,7:10:3.48:198,3,0	0/1:13,0:10:40.20:569,0,40	0/1:6,1:5:16.79:193,0,17	1/1:22,0:21:9.02:391,9,0	./.	1/1:22,0:21:9.03:473,9,0	0/0:14,0:14:30.10:0,30,1799	0/0:38,0:38:11.70:0,12,1015	0/1:18,1:19:9.42:370,0,9	0/1:11,2:13:99:444,0,216	1/1:9,3:11:10.39:937,10,0	1/1:3,1:3:6.49:380,6,0
chr10	35945855	.	CGCGCGCGCGCGTGCGCGTGCACATGTGT	C	8907.35	PASS	AB=0.958;AC=31;AF=0.620;AN=50;BaseQRankSum=5.368;DP=339;FS=8.606;HRun=0;HaplotypeScore=178.7080;InbreedingCoeff=0.2096;MQ=48.03;MQ0=17;MQRankSum=-5.080;QD=39.59;ReadPosRankSum=2.526;VQSLOD=3.3367;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:7,1:8:6.02:257,6,0	./.	0/0:5,0:4:12.04:0,12,364	0/0:8,0:3:1.47:0,1,59	1/1:7,0:7:6.02:127,6,0	1/1:7,6:11:6.02:304,6,0	1/1:16,0:15:6.02:267,6,0	0/0:11,0:8:0:0,0,0	0/1:7,0:7:4.79:214,0,5	0/1:11,0:10:99:1068,0,153	./.	0/0:13,0:13:30.10:0,30,2467	1/1:13,0:13:12.04:769,12,0	1/1:8,0:8:9.03:572,9,0	1/1:6,8:14:9.03:592,9,0	1/1:6,3:8:11.99:609,12,0	1/1:11,0:10:3.01:216,3,0	0/1:12,0:9:24.90:585,0,25	0/1:7,0:5:16.74:207,0,17	1/1:6,16:21:6.02:418,6,0	./.	1/1:10,11:20:9.03:545,9,0	0/0:14,0:14:27.56:0,28,1977	0/0:37,0:37:11.66:0,12,1206	0/1:11,8:19:10.34:368,0,10	0/1:11,0:11:99:413,0,127	0/1:12,0:11:5.98:982,0,6	1/1:4,0:3:6.49:395,6,0
chr10	35945869	.	CGCGTGCACATGTGT	C	4781.77	PASS	AC=38;AF=0.792;AN=48;BaseQRankSum=8.197;DP=230;FS=29.685;HRun=0;HaplotypeScore=116.2536;InbreedingCoeff=0.6516;MQ=64.39;MQ0=5;MQRankSum=-7.875;QD=38.88;ReadPosRankSum=5.800;VQSLOD=2.5586;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,0:2:3.01:104,3,0	./.	0/0:10,0:9:26.45:0,26,682	0/0:12,0:7:14.18:0,14,566	1/1:6,0:6:5.65:175,6,0	1/1:7,1:8:6.02:173,6,0	1/1:3,0:3:3.01:109,3,0	./.	1/1:5,0:5:9.50:295,10,0	1/1:5,0:5:15.05:507,15,0	./.	0/0:21,0:21:54.19:0,54,2722	1/1:3,3:6:12.04:429,12,0	1/1:2,2:4:9.03:310,9,0	1/1:8,2:10:9.03:324,9,0	1/1:8,0:7:11.98:268,12,0	1/1:9,0:9:3.01:108,3,0	1/1:4,0:3:9.03:283,9,0	1/1:1,0:1:3.01:100,3,0	1/1:16,1:17:6.02:209,6,0	./.	1/1:12,2:14:8.52:219,9,0	0/0:17,0:17:42.14:0,42,2105	0/0:34,0:34:17.96:0,18,968	1/1:9,2:11:6.02:218,6,0	1/1:2,0:2:6.02:200,6,0	1/1:3,3:6:15.05:538,15,0	1/1:1,1:2:6.02:212,6,0
chr10	35945874	.	GCACA	G	1837.57	PASS	AC=38;AF=0.792;AN=48;BaseQRankSum=8.688;DP=230;FS=31.794;HRun=0;HaplotypeScore=101.1190;InbreedingCoeff=0.6279;MQ=71.92;MQ0=3;MQRankSum=-8.165;QD=15.06;ReadPosRankSum=6.882;VQSLOD=0.8826;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,0:2:3.01:47,3,0	./.	0/0:13,0:12:33.11:0,33,790	0/0:14,0:9:20.86:0,21,552	1/1:3,3:6:6.02:94,6,0	1/1:8,0:8:3.48:33,3,0	1/1:3,0:3:3.01:56,3,0	./.	1/1:1,4:5:9.03:149,9,0	1/1:5,0:5:15.05:263,15,0	./.	0/0:21,0:21:53.92:0,54,1444	1/1:6,0:6:12.04:172,12,0	1/1:4,0:4:9.03:124,9,0	1/1:10,0:10:9.02:88,9,0	1/1:6,1:7:6.01:58,6,0	1/1:7,2:9:3.01:50,3,0	1/1:2,3:4:9.03:172,9,0	1/1:1,0:1:3.01:48,3,0	1/1:17,0:17:6.02:67,6,0	./.	1/1:13,0:13:6.02:87,6,0	0/0:16,0:16:45.15:0,45,1246	0/0:32,0:32:20.84:0,21,542	1/1:11,0:11:6.02:95,6,0	1/1:2,0:2:6.02:102,6,0	1/1:6,0:6:15.04:210,15,0	1/1:2,0:2:6.02:82,6,0
chr10	35945883	.	T	TGC	1555.69	PASS	AB=1.000;AC=40;AF=0.741;AN=54;BaseQRankSum=2.435;DP=350;FS=2.064;HRun=0;HaplotypeScore=120.2629;InbreedingCoeff=0.6730;MQ=74.63;MQ0=1;MQRankSum=-6.924;QD=7.14;ReadPosRankSum=-0.089;VQSLOD=3.4599;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:16:13.82:164,14,0	1/1:5,0:5:5.92:42,6,0	0/0:16,0:15:45.14:0,45,588	0/0:20,0:15:38.68:0,39,450	1/1:7,1:8:5.29:68,5,0	0/1:8,0:8:0:0,0,0	1/1:10,1:11:5.90:38,6,0	1/1:2,11:13:32.79:384,33,0	1/1:10,1:11:16.27:140,16,0	1/1:11,0:11:26.29:146,26,0	./.	0/0:22,0:22:63.14:0,63,863	1/1:11,0:11:9.32:71,9,0	1/1:4,4:8:5.61:72,6,0	0/1:12,0:12:1.65:2,0,3	1/1:14,0:14:11.04:67,11,0	1/1:11,0:11:5.88:41,6,0	1/1:9,0:9:4.78:68,5,0	1/1:7,0:7:14.50:91,14,0	0/0:18,0:18:2.13:0,2,7	1/1:2,8:10:3.01:56,3,0	1/1:13,0:13:2.22:7,2,0	0/0:15,0:15:45.15:0,45,656	0/0:33,0:33:30.08:0,30,420	1/1:11,0:11:4.63:15,5,0	1/1:7,0:7:17.26:100,17,0	1/1:11,0:11:16.64:88,17,0	1/1:10,0:10:12.46:65,12,0
chr10	35946485	.	AAC	A	15113.72	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=14.611;DP=776;FS=2.758;HRun=0;HaplotypeScore=174.5931;InbreedingCoeff=0.9998;MQ=87.84;MQ0=0;MQRankSum=-1.052;QD=33.96;ReadPosRankSum=1.486;VQSLOD=6.0715;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,135,2258	1/1:3,9:12:27.09:365,27,0	0/0:40,0:40:59.25:0,59,1414	0/0:32,0:32:85.50:0,86,1322	0/0:23,0:23:66.21:0,66,1128	1/1:2,24:26:63.21:852,63,0	1/1:3,21:24:51.17:690,51,0	1/1:5,21:26:63.18:832,63,0	0/0:28,0:28:69.22:0,69,1179	1/1:6,26:32:75.22:983,75,0	1/1:1,17:18:42.14:568,42,0	0/0:29,0:29:81.26:0,81,1379	1/1:1,17:18:45.15:604,45,0	1/1:2,22:24:60.20:812,60,0	1/1:3,27:30:84.28:1136,84,0	0/0:29,0:29:63.22:0,63,1099	0/0:39,0:39:96.30:0,96,1634	1/1:4,29:33:34.69:1084,35,0	1/1:3,24:27:69.21:915,69,0	1/1:1,29:30:81.20:1068,81,0	1/1:4,27:31:72.24:974,72,0	1/1:0,22:22:66.22:893,66,0	0/0:25,0:25:69.22:0,69,1171	0/0:32,0:32:90.31:0,90,1570	1/1:1,24:25:72.24:973,72,0	1/1:2,23:25:69.10:865,69,0	1/1:6,22:28:69.23:932,69,0	1/1:0,14:14:42.14:568,42,0
chr10	35946576	.	C	CTGGCAA	41856.14	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=9.766;DP=666;FS=3.980;HRun=0;HaplotypeScore=189.7648;InbreedingCoeff=0.9988;MQ=78.83;MQ0=0;MQRankSum=-16.156;QD=77.37;ReadPosRankSum=0.536;VQSLOD=5.1371;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,29:37:87.14:2867,87,0	1/1:4,6:11:30.10:938,30,0	0/0:36,0:36:91.19:0,91,1963	0/0:20,0:19:53.91:0,54,1059	1/1:4,12:16:36.03:997,36,0	1/1:6,18:25:63.17:1999,63,0	1/1:3,20:23:66.18:2184,66,0	1/1:24,12:36:63.17:1927,63,0	1/1:8,18:29:75.19:2390,75,0	1/1:6,14:20:57.15:1788,57,0	1/1:6,10:17:45.15:1340,45,0	0/0:23,0:23:66.21:0,66,1514	1/1:7,15:22:63.16:1959,63,0	1/1:8,13:21:54.16:1638,54,0	1/1:4,23:27:81.24:2659,81,0	1/1:6,25:32:87.30:2982,87,0	1/1:10,21:32:66.23:2227,66,0	1/1:9,11:20:43.77:1684,44,0	1/1:14,6:22:45.11:1203,45,0	1/1:12,9:21:57.11:1354,57,0	1/1:17,6:23:33.91:713,34,0	1/1:4,14:18:45.07:1508,45,0	0/0:16,0:16:48.16:0,48,1135	0/0:30,0:30:87.30:0,87,2057	1/1:6,12:18:47.98:1372,48,0	1/1:11,14:27:75.15:2359,75,0	1/1:7,25:37:99:3326,99,0	1/1:4,3:7:20.95:444,21,0
chr10	35946903	.	C	CA	19026.64	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=8.834;DP=646;FS=0.799;HRun=1;HaplotypeScore=137.8564;InbreedingCoeff=0.9844;MQ=75.00;MQ0=2;MQRankSum=-12.689;QD=36.31;ReadPosRankSum=0.057;VQSLOD=4.4062;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,31:37:81.25:1256,81,0	1/1:2,9:11:27.09:423,27,0	0/0:21,0:21:63.18:0,63,809	0/0:20,0:20:54.16:0,54,695	1/1:2,17:19:36.09:548,36,0	1/1:2,14:16:33.10:502,33,0	1/1:6,29:35:75.20:1135,75,0	1/1:4,22:26:72.24:1122,72,0	1/1:2,14:17:39.13:615,39,0	1/1:0,23:23:69.22:1059,69,0	1/1:0,14:14:18.06:288,18,0	0/0:33,0:33:93.31:0,93,1296	1/1:3,26:30:84.25:1271,84,0	1/1:1,20:21:57.18:887,57,0	1/1:5,35:41:99:1512,99,0	1/1:3,29:32:81.28:1292,81,0	1/1:1,19:20:51.17:813,51,0	1/1:0,17:17:45.15:718,45,0	1/1:2,16:18:51.17:814,51,0	1/1:4,17:22:51.17:807,51,0	1/1:9,22:32:44.98:645,45,0	1/1:2,17:19:39.12:593,39,0	0/0:15,0:15:38.92:0,39,538	0/0:33,0:33:96.26:0,96,1299	1/1:9,10:19:39.11:563,39,0	1/1:3,24:27:75.26:1183,75,0	1/1:1,20:21:54.17:838,54,0	1/1:1,3:4:9.03:144,9,0
chr10	35946915	.	G	GT	16010.99	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=13.014;DP=590;FS=10.116;HRun=1;HaplotypeScore=139.4611;InbreedingCoeff=0.9877;MQ=73.69;MQ0=0;MQRankSum=-12.650;QD=33.57;ReadPosRankSum=-1.266;VQSLOD=2.9644;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,29:34:71.98:888,72,0	1/1:1,11:12:30.06:411,30,0	0/0:14,0:14:37.52:0,38,444	0/0:23,0:23:60.19:0,60,758	1/1:0,17:17:30.06:423,30,0	1/1:1,17:18:45.12:640,45,0	1/1:3,35:38:84.20:1202,84,0	1/1:2,21:23:69.22:999,69,0	1/1:0,19:19:48.16:718,48,0	1/1:1,13:14:42.14:628,42,0	1/1:3,5:8:11.98:135,12,0	0/0:33,0:33:96.30:0,96,1231	1/1:1,21:22:57.19:845,57,0	1/1:1,20:21:57.19:851,57,0	1/1:1,36:37:84.28:1238,84,0	1/1:4,28:32:75.21:1090,75,0	1/1:3,19:22:57.09:753,57,0	1/1:0,17:17:39.13:584,39,0	1/1:5,16:21:57.14:811,57,0	1/1:4,12:17:38.99:491,39,0	1/1:4,28:32:62.62:683,63,0	1/1:0,12:12:29.98:364,30,0	0/0:10,0:10:18.05:0,18,233	0/0:33,0:33:96.29:0,96,1228	1/1:2,7:9:21.05:292,21,0	1/1:3,17:20:51.17:762,51,0	1/1:1,24:25:63.21:933,63,0	1/1:1,6:7:18.06:270,18,0
chr10	35947661	.	AAACC	A	1371.21	PASS	AB=1.000;AC=33;AF=0.635;AN=52;BaseQRankSum=1.122;DP=251;FS=14.130;HRun=0;HaplotypeScore=44.3078;InbreedingCoeff=0.5853;MQ=78.86;MQ0=6;MQRankSum=-1.370;QD=8.79;ReadPosRankSum=3.699;VQSLOD=0.2732;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:48,0:47:99:414,0,101	1/1:1,3:4:3.01:51,3,0	0/0:30,0:21:35.29:0,35,323	0/0:22,0:16:13.87:0,14,174	0/0:0,0:1:3.01:0,3,53	1/1:1,4:5:3.01:51,3,0	1/1:3,2:5:3.01:51,3,0	1/1:20,0:20:15.02:140,15,0	0/0:5,0:5:9.02:0,9,129	1/1:10,0:10:6.01:57,6,0	./.	0/0:6,0:6:15:0,15,132	1/1:3,0:3:5.99:49,6,0	1/1:6,4:10:6.02:99,6,0	1/1:5,0:5:9:92,9,0	0/0:9,0:9:15.01:0,15,141	0/0:2,0:6:5.95:0,6,71	1/1:3,0:3:5.99:50,6,0	1/1:5,0:4:3:26,3,0	1/1:1,3:4:5.95:67,6,0	1/1:11,0:11:11.99:102,12,0	1/1:3,2:5:3.01:51,3,0	0/0:6,0:6:15.01:0,15,180	0/0:6,0:6:8.98:0,9,74	1/1:5,0:5:5.99:50,6,0	1/1:4,4:8:12.02:152,12,0	1/1:5,0:5:5.99:48,6,0	./.
chr10	35947678	.	AACCC	A	1053.21	PASS	AB=1.000;AC=17;AF=0.447;AN=38;BaseQRankSum=0.423;DP=162;FS=13.624;HRun=0;HaplotypeScore=32.3889;InbreedingCoeff=0.4281;MQ=67.85;MQ0=6;MQRankSum=-0.509;QD=15.05;ReadPosRankSum=4.607;VQSLOD=1.0281;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,35:42:54.18:907,54,0	1/1:3,0:3:3:26,3,0	0/0:22,0:15:8.96:0,9,81	0/0:15,0:10:14.60:0,15,141	0/0:1,0:1:3.01:0,3,59	1/1:6,0:6:3:25,3,0	1/1:2,0:2:3.01:30,3,0	0/0:8,0:8:2.94:0,3,18	0/0:5,0:5:11.98:0,12,132	./.	./.	./.	./.	1/1:4,0:4:6.01:59,6,0	0/1:3,0:3:8.06:12,0,8	0/0:5,0:5:3.01:0,3,58	0/0:5,0:5:3.01:0,3,59	./.	0/0:3,0:2:3:0,3,27	1/1:3,0:3:3.01:43,3,0	0/0:6,0:6:0:0,0,0	1/1:2,0:2:3:27,3,0	0/0:4,0:4:3.01:0,3,75	./.	./.	1/1:4,0:4:5.99:54,6,0	./.	./.
chr10	35948110	.	ACG	A	17819.05	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=9.222;DP=708;FS=7.852;HRun=0;HaplotypeScore=112.1028;InbreedingCoeff=0.9975;MQ=84.86;MQ0=0;MQRankSum=-3.625;QD=43.89;ReadPosRankSum=2.332;VQSLOD=6.2839;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,135,2549	1/1:0,12:12:30.10:459,30,0	0/0:18,0:18:48.10:0,48,829	0/0:27,0:27:81.25:0,81,1479	0/0:28,0:28:81.28:0,81,1548	1/1:1,19:20:57.19:871,57,0	1/1:0,26:26:78.26:1192,78,0	1/1:1,28:29:81.25:1213,81,0	0/0:31,0:31:87.30:0,87,1672	1/1:1,24:25:75.23:1118,75,0	1/1:0,12:12:36.09:526,36,0	0/0:32,0:32:96.33:0,96,1843	1/1:0,23:23:69.23:1056,69,0	1/1:0,27:27:78.26:1194,78,0	1/1:0,31:31:90.31:1378,90,0	0/0:32,0:32:93.32:0,93,1793	0/0:31,0:31:90.31:0,90,1736	1/1:0,19:19:57.19:873,57,0	1/1:1,21:22:63.21:964,63,0	1/1:2,23:25:72.24:1098,72,0	1/1:0,38:38:99:1699,111,0	1/1:0,17:17:48.16:735,48,0	0/0:24,0:24:72.25:0,72,1365	0/0:32,0:32:93.31:0,93,1761	1/1:1,12:13:36.12:548,36,0	1/1:1,31:32:93.32:1424,93,0	1/1:0,30:30:81.28:1240,81,0	1/1:0,5:5:15.05:230,15,0
chr10	35948111	.	CG	C	2499.74	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=20.592;DP=705;FS=7.216;HRun=1;HaplotypeScore=149.7664;InbreedingCoeff=0.9935;MQ=85.45;MQ0=0;MQRankSum=-4.400;QD=6.22;ReadPosRankSum=2.726;VQSLOD=0.6416;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,138,2145	1/1:12,0:12:22.20:70,22,0	0/0:18,0:18:51.10:0,51,734	0/0:28,0:28:84.26:0,84,1299	0/0:27,0:27:81.28:0,81,1282	1/1:19,1:20:42.87:142,43,0	1/1:26,0:26:57.06:179,57,0	1/1:28,0:28:57.06:179,57,0	0/0:31,0:31:90.29:0,90,1412	1/1:24,1:25:53.17:176,53,0	1/1:12,0:12:24.42:77,24,0	0/0:32,0:32:96.33:0,96,1533	1/1:23,0:23:51.06:160,51,0	1/1:27,0:27:57.73:182,58,0	1/1:31,0:31:66.61:209,67,0	0/0:33,0:33:96.32:0,96,1510	0/0:31,0:31:93.28:0,93,1458	1/1:19,0:19:42.18:133,42,0	1/1:21,0:21:46.44:146,46,0	1/1:23,1:24:54.27:177,54,0	1/1:38,0:38:82.15:258,82,0	1/1:17,0:17:35.52:112,36,0	0/0:24,0:24:72.24:0,72,1136	0/0:32,0:32:93.30:0,93,1463	1/1:12,1:13:26.79:85,27,0	1/1:31,0:31:68.83:217,69,0	1/1:30,0:30:59.95:189,60,0	1/1:5,0:5:11.10:35,11,0
chr10	35949032	.	G	GAGGCC	12218.33	PASS	AB=0.664;AC=19;AF=0.339;AN=56;BaseQRankSum=15.384;DP=552;FS=12.616;HRun=0;HaplotypeScore=223.8125;InbreedingCoeff=-0.3670;MQ=72.70;MQ0=1;MQRankSum=-14.304;QD=43.64;ReadPosRankSum=3.939;VQSLOD=3.5666;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,156,3439	0/1:4,5:9:73:366,0,73	0/0:27,0:27:78.27:0,78,1759	0/0:25,0:25:42.76:0,43,1372	0/0:25,0:25:72.25:0,72,1667	0/1:8,17:27:99:1506,0,202	0/1:8,6:14:99:388,0,283	0/1:15,1:16:80.99:81,0,590	0/0:20,0:20:60.21:0,60,1391	0/1:6,10:16:99:997,0,163	0/1:7,7:14:99:530,0,233	0/0:24,0:24:69.24:0,69,1606	0/1:5,9:16:99:732,0,207	0/1:5,15:20:76.05:1287,0,76	0/1:9,16:25:99:1443,0,276	0/0:26,0:25:78.27:0,78,1785	0/0:30,0:30:87.30:0,87,2016	0/1:5,5:10:99:526,0,130	0/1:7,6:13:99:536,0,285	0/1:10,4:15:99:314,0,178	0/1:4,9:13:99:203,0,127	0/1:7,5:12:99:267,0,212	0/0:14,0:14:42.14:0,42,969	0/0:28,0:28:81.22:0,81,1762	0/1:8,5:13:99:305,0,277	0/1:7,11:18:99:990,0,273	0/1:5,17:22:99:1462,0,112	1/1:0,4:4:9.03:284,9,0
chr10	35949034	.	A	AATCCTAAGC	29214.92	PASS	AB=0.737;AC=35;AF=0.625;AN=56;BaseQRankSum=17.404;DP=593;FS=5.123;HRun=0;HaplotypeScore=234.0258;InbreedingCoeff=0.9154;MQ=69.10;MQ0=1;MQRankSum=-18.568;QD=91.01;ReadPosRankSum=0.515;VQSLOD=4.4401;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,157,4567	1/1:5,5:10:30.10:969,30,0	0/0:26,0:26:77.89:0,78,2010	0/0:24,0:24:64.39:0,64,1640	0/0:25,0:25:75.26:0,75,2253	1/1:11,17:29:87.29:3072,87,0	1/1:11,6:17:51.17:1502,51,0	1/1:19,1:20:60.20:1282,60,0	0/0:21,0:21:60.17:0,60,1761	1/1:12,9:20:56.71:1958,57,0	1/1:8,7:15:42.14:1173,42,0	0/0:24,0:24:69.24:0,69,2196	1/1:9,10:20:54.18:1777,54,0	1/1:6,15:21:60.21:2434,60,0	1/1:10,16:26:74.05:2691,74,0	0/0:26,0:25:78.25:0,78,2393	0/0:30,0:30:87.28:0,87,2635	1/1:7,4:12:34:1226,34,0	1/1:12,6:18:51.17:1559,51,0	0/1:9,5:14:61.73:927,0,62	1/1:8,9:17:42.14:1209,42,0	1/1:10,5:15:40.69:954,41,0	0/0:15,0:15:45.14:0,45,1355	0/0:27,0:27:78.21:0,78,2225	1/1:10,5:15:42.09:1113,42,0	1/1:10,11:21:63.17:2237,63,0	1/1:8,17:24:69.22:2692,69,0	1/1:0,4:4:9.03:439,9,0
chr10	35949226	.	AGT	A	42.70	PASS	AB=0.955;AC=14;AF=0.304;AN=46;BaseQRankSum=4.867;DP=562;FS=15.382;HRun=0;HaplotypeScore=102.2786;InbreedingCoeff=0.2944;MQ=71.56;MQ0=12;MQRankSum=-2.650;QD=0.24;ReadPosRankSum=0.888;VQSLOD=1.1139;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	0/0:6,0:6:5.52:0,6,47	./.	./.	1/1:19,0:19:2.84:14,3,0	0/0:21,0:21:0:0,0,0	0/0:24,0:23:2.52:0,3,23	0/0:26,0:25:1.25:0,1,3	1/1:20,0:20:5.68:28,6,0	0/0:15,0:15:0.94:0,1,3	0/0:4,0:4:2.99:0,3,24	0/1:22,0:21:21.01:21,0,83	./.	0/0:28,0:28:21.43:0,21,171	0/0:20,0:20:3:0,3,25	1/1:18,0:18:8.52:42,9,0	1/1:32,0:32:8.99:42,9,0	0/0:21,0:20:6.24:0,6,126	0/0:15,0:15:3.47:0,3,28	./.	0/0:47,0:47:6.20:0,6,51	0/0:13,0:13:5.03:0,5,31	0/1:13,1:13:15.19:15,0,134	0/1:27,4:31:2.15:2,0,255	1/1:9,0:9:0.47:1,0,0	0/1:13,0:13:0:0,0,0	0/0:20,0:19:13.31:0,13,95	0/0:5,0:4:4.23:0,4,26
chr10	35949260	.	TGTGTGTGTGTGTGTGAGTGTGTGTGA	T	3218.01	PASS	AB=1.000;AC=20;AF=0.357;AN=56;BaseQRankSum=4.785;DP=556;FS=14.423;HRun=0;HaplotypeScore=283.1567;InbreedingCoeff=-0.0057;MQ=51.30;MQ0=25;MQRankSum=0.572;QD=9.78;ReadPosRankSum=-5.790;VQSLOD=0.3415;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:29:79.95:80,0,938	0/0:10,0:10:18.05:0,18,981	0/0:24,0:10:30.05:0,30,854	0/0:34,0:17:43.96:0,44,909	1/1:5,18:21:3.01:213,3,0	0/0:12,0:12:18.93:0,19,972	0/1:18,0:16:53.57:54,0,966	0/1:12,0:11:99:150,0,691	1/1:4,13:17:6.02:426,6,0	0/1:19,0:18:90.59:91,0,1197	0/0:9,0:9:3:0,3,201	0/0:22,0:21:43.09:0,43,3889	0/1:7,0:7:31.46:31,0,773	0/0:19,0:19:13.56:0,14,2272	0/1:19,0:18:99:109,0,1220	1/1:17,1:17:33.11:1025,33,0	1/1:5,25:30:9.02:640,9,0	0/1:27,0:26:99:184,0,2598	0/1:14,0:12:99:142,0,972	0/0:13,0:13:5.99:0,6,247	0/1:54,0:53:37.07:37,0,3318	0/0:14,0:14:20.86:0,21,1049	0/0:18,0:17:48.16:0,48,4043	0/0:36,0:36:78.27:0,78,6044	0/0:16,0:15:15.04:0,15,655	0/1:16,0:16:99:197,0,803	0/1:17,0:17:4.44:4,0,2109	0/1:8,0:7:4.85:5,0,851
chr10	35949274	.	TGAGTGTGTGTGAGA	T	8899.12	PASS	AB=0.997;AC=34;AF=0.607;AN=56;BaseQRankSum=4.874;DP=521;FS=89.171;HRun=0;HaplotypeScore=172.5235;InbreedingCoeff=0.1151;MQ=58.59;MQ0=19;MQRankSum=-1.976;QD=23.48;ReadPosRankSum=0.182;VQSLOD=0.4294;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:21:0.89:157,0,1	0/1:8,0:8:47.14:118,0,47	0/0:28,0:13:39:0,39,998	0/0:42,0:25:53.17:0,53,1631	1/1:20,0:18:3.01:92,3,0	0/1:15,0:15:25.21:372,0,25	0/1:19,0:17:1.18:659,0,1	1/1:13,0:13:39.13:842,39,0	1/1:14,0:14:6.02:185,6,0	1/1:21,0:21:22.08:598,22,0	0/1:11,0:11:16:31,0,16	0/0:20,0:19:38.94:0,39,2023	0/1:4,0:4:65.87:90,0,66	0/1:20,0:20:94.74:214,0,95	1/1:15,0:15:5.81:544,6,0	1/1:16,0:15:35.99:496,36,0	1/1:26,0:26:9.03:271,9,0	0/1:25,0:26:86.91:933,0,87	1/1:12,0:11:9.61:398,10,0	1/1:14,0:14:17.84:124,18,0	0/1:38,0:37:18.35:1230,0,18	0/1:13,0:13:8.09:8,0,78	0/0:18,0:17:45.14:0,45,2177	0/0:34,0:34:72.25:0,72,3152	1/1:15,0:14:23.39:323,23,0	1/1:1,17:18:39.02:758,39,0	0/1:12,0:12:66.46:367,0,66	0/1:6,0:5:10.65:90,0,11
chr10	35949278	.	TGTGTGTGAGA	T	7106.03	PASS	AB=1.000;AC=44;AF=0.786;AN=56;BaseQRankSum=10.310;DP=477;FS=35.870;HRun=0;HaplotypeScore=146.8426;InbreedingCoeff=0.7198;MQ=63.18;MQ0=18;MQRankSum=-1.669;QD=21.60;ReadPosRankSum=-0.357;VQSLOD=2.5052;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:22:8.61:9,0,60	1/1:6,0:6:14.86:131,15,0	0/0:28,0:13:39:0,39,651	0/0:45,0:28:68.48:0,68,1169	1/1:20,0:18:3.01:55,3,0	1/1:11,0:11:26.96:368,27,0	1/1:15,0:13:36.02:503,36,0	1/1:16,0:16:45.08:594,45,0	1/1:14,0:14:6.02:110,6,0	1/1:21,0:21:41.85:469,42,0	1/1:9,0:9:5.93:40,6,0	0/0:20,0:20:41.57:0,42,1445	0/1:8,0:8:2.98:176,0,3	1/1:8,0:8:17.97:224,18,0	1/1:13,0:12:30.10:488,30,0	1/1:16,0:15:20.19:193,20,0	1/1:25,0:25:9.03:161,9,0	1/1:16,0:16:48.11:786,48,0	1/1:1,9:9:24.06:352,24,0	1/1:14,0:14:20.81:144,21,0	1/1:30,0:29:63.22:1090,63,0	1/1:10,0:10:5.93:40,6,0	0/0:17,0:16:42.14:0,42,1500	0/0:38,0:38:84.20:0,84,2294	1/1:13,0:12:20.94:270,21,0	1/1:17,0:17:39.06:493,39,0	1/1:8,0:8:18.03:296,18,0	1/1:6,0:5:8.98:114,9,0
chr10	35949284	.	TGAGA	T	7532.02	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=8.728;DP=494;FS=21.263;HRun=0;HaplotypeScore=116.1185;InbreedingCoeff=0.8615;MQ=69.97;MQ0=13;MQRankSum=-3.822;QD=23.61;ReadPosRankSum=-0.155;VQSLOD=3.1451;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:15.75:0,16,125	1/1:6,0:6:14.72:123,15,0	0/0:32,0:17:44.06:0,44,1144	0/0:48,0:31:87.18:0,87,2087	1/1:19,0:18:2.92:17,3,0	1/1:11,0:11:29.97:413,30,0	1/1:17,0:15:42:575,42,0	1/1:0,20:20:57.11:771,57,0	1/1:14,0:14:5.87:35,6,0	1/1:0,21:21:41.71:495,42,0	1/1:0,10:10:5.93:40,6,0	0/0:19,0:19:48.14:0,48,1225	1/1:8,0:8:20.94:268,21,0	1/1:10,0:10:23.99:335,24,0	1/1:13,0:13:33.11:535,33,0	1/1:18,0:17:6.60:47,7,0	1/1:25,0:25:8.64:46,9,0	1/1:18,0:18:54.17:853,54,0	1/1:10,0:9:22.32:319,22,0	1/1:0,14:14:20.81:144,21,0	1/1:32,0:31:69.71:1168,70,0	1/1:0,10:10:5.93:40,6,0	0/0:15,0:15:39.13:0,39,1098	0/0:36,0:36:75.26:0,75,2105	1/1:12,0:12:23.91:295,24,0	1/1:17,0:17:39.10:565,39,0	1/1:7,0:7:18.06:293,18,0	1/1:7,0:6:11.99:153,12,0
chr10	35949756	.	C	CT	24676.66	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=13.607;DP=705;FS=2.068;HRun=0;HaplotypeScore=174.1496;InbreedingCoeff=0.9953;MQ=83.69;MQ0=0;MQRankSum=-14.269;QD=43.22;ReadPosRankSum=1.882;VQSLOD=4.0934;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,47:52:99:2159,141,0	1/1:2,18:20:57.18:886,57,0	0/0:26,0:26:78.23:0,78,1056	0/0:35,0:35:82.77:0,83,1127	1/1:0,30:30:84.22:1312,84,0	1/1:1,16:17:48.16:755,48,0	1/1:3,20:23:66.16:996,66,0	1/1:3,24:27:81.27:1266,81,0	1/1:0,23:23:63.21:1007,63,0	1/1:3,32:35:99:1600,102,0	1/1:0,17:17:45.15:713,45,0	0/0:33,0:33:93.31:0,93,1298	1/1:3,23:26:69.24:1097,69,0	1/1:0,29:29:78.27:1239,78,0	1/1:1,26:27:81.28:1287,81,0	1/1:0,34:34:96.33:1534,96,0	1/1:0,31:30:87.30:1388,87,0	1/1:2,6:8:18.06:287,18,0	1/1:3,19:22:60.08:901,60,0	1/1:3,29:32:90.30:1409,90,0	1/1:4,7:11:21.07:332,21,0	1/1:3,22:25:63.21:993,63,0	0/0:18,0:18:54.18:0,54,754	0/0:22,0:22:63.21:0,63,880	1/1:4,19:23:66.21:991,66,0	1/1:6,20:26:72.19:1091,72,0	1/1:2,24:26:72.25:1146,72,0	1/1:0,7:7:18.06:287,18,0
chr10	35949772	.	T	TA	18325.19	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=6.154;DP=662;FS=0.300;HRun=0;HaplotypeScore=173.1075;InbreedingCoeff=0.9972;MQ=85.40;MQ0=0;MQRankSum=-17.024;QD=43.12;ReadPosRankSum=0.178;VQSLOD=4.0719;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,42:42:99:1768,111,0	1/1:1,18:19:54.18:861,54,0	0/0:31,0:31:90.27:0,90,1217	0/0:25,0:25:69.26:0,69,929	0/0:25,0:25:75.25:0,75,1043	1/1:0,17:17:45.15:718,45,0	1/1:0,25:25:69.24:1100,69,0	1/1:0,20:20:57.19:909,57,0	0/0:23,0:23:63.21:0,63,881	1/1:1,34:35:99:1580,99,0	1/1:0,18:18:41.32:668,41,0	0/0:31,0:31:93.30:0,93,1284	1/1:0,27:27:69.23:1094,69,0	1/1:2,19:21:60.19:929,60,0	1/1:1,20:21:54.18:860,54,0	0/0:34,0:34:96.32:0,96,1343	0/0:24,0:24:69.23:0,69,965	1/1:0,12:12:33.11:527,33,0	1/1:0,23:23:66.22:1050,66,0	1/1:0,31:31:87.30:1387,87,0	1/1:1,13:14:24.08:383,24,0	1/1:1,26:27:72.25:1148,72,0	0/0:21,0:21:60.18:0,60,807	0/0:23,0:23:69.22:0,69,947	1/1:0,21:21:57.19:909,57,0	1/1:0,25:25:72.25:1150,72,0	1/1:0,22:22:66.22:1047,66,0	1/1:0,5:5:15.05:239,15,0
chr10	35951319	.	AC	A	3643.85	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=10.599;DP=775;FS=0.820;HRun=3;HaplotypeScore=74.5131;InbreedingCoeff=1.0000;MQ=81.40;MQ0=0;MQRankSum=-4.070;QD=34.70;ReadPosRankSum=2.240;VQSLOD=4.3293;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,138,1987	0/0:14,0:14:39.13:0,39,561	0/0:20,0:20:54.11:0,54,706	0/0:22,0:21:54.14:0,54,731	1/1:1,31:32:90.28:1115,90,0	0/0:26,0:26:78.26:0,78,1122	0/0:27,0:27:81.26:0,81,1146	0/0:27,0:27:78.24:0,78,1075	1/1:1,28:29:81.25:1004,81,0	0/0:43,0:43:99:0,129,1842	0/0:18,0:18:54.16:0,54,758	0/0:31,0:31:93.31:0,93,1339	0/0:32,0:32:96.31:0,96,1359	0/0:31,0:31:93.30:0,93,1319	0/0:28,0:28:84.28:0,84,1207	1/1:0,22:22:60.19:744,60,0	1/1:0,22:22:63.20:781,63,0	0/0:18,0:18:54.15:0,54,741	0/0:27,0:27:72.23:0,72,1019	0/0:22,0:22:63.20:0,63,888	0/0:46,0:46:99:0,138,1929	0/0:28,0:28:81.26:0,81,1149	0/0:34,0:34:99:0,102,1453	0/0:22,0:22:66.21:0,66,931	0/0:32,0:32:90.28:0,90,1273	0/0:30,0:30:87.28:0,87,1236	0/0:31,0:31:93.31:0,93,1337	0/0:13,0:13:39.13:0,39,561
chr10	35951779	.	TCTCTG	T	3226.07	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=7.997;DP=745;FS=0.000;HRun=0;HaplotypeScore=162.1437;InbreedingCoeff=0.9951;MQ=85.78;MQ0=0;MQRankSum=-9.971;QD=40.33;ReadPosRankSum=1.862;VQSLOD=3.3499;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,132,4188	0/0:6,0:6:18.06:0,18,560	0/0:27,0:27:78.27:0,78,2263	0/0:28,0:28:77.38:0,77,2178	1/1:0,12:12:18.84:160,19,0	0/0:24,0:24:72.25:0,72,2147	0/0:32,0:32:93.32:0,93,2929	0/0:36,0:36:99:0,102,3257	1/1:0,27:27:51.17:1134,51,0	0/0:29,0:28:81.23:0,81,2443	0/0:12,0:12:30.10:0,30,968	0/0:35,0:35:99:0,99,3122	0/0:27,0:27:78.27:0,78,2487	0/0:35,0:35:99:0,102,3171	0/0:34,0:33:99:0,102,3246	1/1:2,17:19:48.16:1025,48,0	1/1:0,22:22:48.16:1068,48,0	0/0:38,0:38:99:0,108,3431	0/0:17,0:17:51.13:0,51,1256	0/0:21,0:21:63.22:0,63,1945	0/0:73,0:73:99:0,215,6796	0/0:14,0:14:39.13:0,39,1223	0/0:13,0:13:37.37:0,37,1164	0/0:42,0:42:99:0,120,3729	0/0:15,0:15:42.14:0,42,1334	0/0:28,0:28:84.25:0,84,2533	0/0:26,0:26:72.25:0,72,2251	0/0:8,0:8:24.08:0,24,672
chr10	35952012	.	TGAGA	T	85.05	PASS	AB=0.972;AC=11;AF=0.275;AN=40;BaseQRankSum=0.538;DP=574;FS=5.565;HRun=0;HaplotypeScore=167.4834;InbreedingCoeff=0.2954;MQ=57.49;MQ0=17;MQRankSum=-0.932;QD=0.54;ReadPosRankSum=0.745;VQSLOD=2.5439;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:7.35:0,7,52	1/1:7,0:7:0.13:0,0,0	./.	./.	./.	0/1:19,0:17:0:0,0,0	1/1:23,0:20:0.34:0,0,0	0/0:24,0:21:5.60:0,6,28	0/1:15,2:17:8.56:87,0,9	0/0:32,0:29:30.46:0,30,169	./.	0/0:24,0:24:23.73:0,24,361	0/1:21,0:20:0.93:1,0,2	0/0:19,0:18:3.01:0,3,33	0/1:22,0:21:0:0,0,0	1/1:21,2:23:4.70:52,5,0	0/1:25,1:26:14.59:37,0,15	0/0:19,0:18:5.83:0,6,33	0/0:21,0:17:2.77:0,3,42	./.	./.	0/0:14,0:13:0:0,0,0	./.	0/0:19,0:19:17.51:0,18,215	./.	0/0:19,0:16:12.52:0,13,95	0/0:20,0:18:8.54:0,9,50	0/0:5,0:5:0.89:0,1,2
chr10	35952029	.	G	GAC	1858.29	PASS	AB=0.876;AC=25;AF=0.463;AN=54;BaseQRankSum=6.128;DP=575;FS=13.627;HRun=0;HaplotypeScore=133.9823;InbreedingCoeff=0.2935;MQ=43.47;MQ0=36;MQRankSum=-0.638;QD=5.47;ReadPosRankSum=1.498;VQSLOD=2.5320;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:25:35.07:0,35,272	1/1:8,0:7:4.98:32,5,0	0/0:11,0:4:6.01:0,6,57	0/0:14,0:10:14.92:0,15,124	0/0:17,0:15:14.93:0,15,116	1/1:17,0:15:26.92:215,27,0	0/1:22,0:17:5.32:63,0,5	0/1:28,0:22:99:105,0,108	0/0:20,0:18:17.89:0,18,135	0/1:34,4:31:18.53:445,0,19	./.	0/0:29,0:28:56.94:0,57,553	1/1:4,12:15:6.02:90,6,0	0/1:4,11:14:5.79:25,0,6	1/1:23,1:19:23.95:204,24,0	0/0:20,0:19:29.83:0,30,215	0/0:26,0:26:46.03:0,46,315	0/1:20,0:16:30.59:174,0,31	0/1:13,1:11:21.67:78,0,22	0/1:8,17:25:9.56:13,0,10	1/1:23,0:15:5.99:50,6,0	1/1:14,0:12:8.21:57,8,0	0/0:22,0:21:29.94:0,30,243	0/0:22,0:17:29.94:0,30,288	1/1:20,4:20:9.46:77,9,0	0/1:22,1:17:28.74:174,0,29	0/1:12,1:12:8.89:142,0,9	1/1:14,0:10:14.51:98,15,0
chr10	35952057	.	GAC	G	644.03	PASS	AB=1.000;AC=29;AF=0.690;AN=42;BaseQRankSum=5.068;DP=411;FS=10.914;HRun=0;HaplotypeScore=96.4914;InbreedingCoeff=0.1607;MQ=31.45;MQ0=34;MQRankSum=-3.250;QD=2.50;ReadPosRankSum=-1.580;VQSLOD=0.9122;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:15:12.85:97,13,0	1/1:7,1:7:0.13:5,0,0	./.	./.	./.	0/0:9,0:8:2.92:0,3,17	1/1:14,0:9:2.39:9,2,0	0/0:23,0:15:4.75:0,5,123	1/1:19,0:16:5.79:31,6,0	1/1:24,1:20:22.51:224,23,0	./.	0/0:32,0:32:27.02:0,27,493	1/1:13,0:13:6.42:51,6,0	1/1:9,0:8:3.45:22,3,0	1/1:17,0:12:2.94:18,3,0	1/1:14,0:13:8.80:58,9,0	1/1:16,0:16:2.56:38,3,0	0/1:18,0:14:11.86:53,0,12	0/1:11,0:8:9.72:37,0,10	./.	./.	./.	0/0:11,0:11:0.98:0,1,57	0/1:22,0:19:12.03:12,0,173	0/1:16,0:14:0.03:0,0,0	0/1:19,0:13:14.64:77,0,15	1/1:8,0:7:1.89:17,2,0	1/1:10,0:6:2.97:20,3,0
chr10	35952063	.	GAC	G	566.59	PASS	AB=0.976;AC=23;AF=0.479;AN=48;BaseQRankSum=6.107;DP=395;FS=7.850;HRun=0;HaplotypeScore=85.6720;InbreedingCoeff=0.3452;MQ=31.00;MQ0=33;MQRankSum=-3.967;QD=2.78;ReadPosRankSum=-0.693;VQSLOD=0.4259;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:11:6.87:49,7,0	1/1:8,0:7:4.35:26,4,0	0/0:4,0:1:2.98:0,3,22	./.	0/0:9,1:7:0.89:0,1,2	0/0:2,7:8:2.94:0,3,18	1/1:13,1:9:0.43:1,0,0	0/0:22,0:14:17.51:0,18,158	1/1:16,0:13:5.24:21,5,0	1/1:22,0:17:17.38:180,17,0	./.	0/0:29,0:29:45.95:0,46,994	1/1:12,1:13:2.05:44,2,0	1/1:8,1:8:3.45:22,3,0	0/1:15,0:10:0:0,0,0	1/1:14,0:13:5.84:40,6,0	1/1:16,0:15:14.81:79,15,0	0/1:18,0:14:46.26:51,0,46	0/1:12,0:8:13.61:57,0,14	./.	0/0:21,0:13:0.47:0,0,1	./.	0/0:14,0:14:4.93:0,5,196	0/0:24,0:21:28.25:0,28,407	0/1:13,1:12:0.03:0,0,0	0/1:17,1:14:48.71:137,0,49	0/0:6,0:5:1.57:0,2,6	0/0:5,2:5:2.22:0,2,7
chr10	35952071	.	GAC	G	824.22	PASS	AB=0.943;AC=23;AF=0.523;AN=44;BaseQRankSum=5.743;DP=396;FS=2.688;HRun=0;HaplotypeScore=75.8581;InbreedingCoeff=0.4110;MQ=30.34;MQ0=36;MQRankSum=-7.200;QD=4.46;ReadPosRankSum=-1.760;VQSLOD=2.2770;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:7,1:4:0:0,0,0	1/1:7,1:7:2.91:33,3,0	0/0:8,0:2:6.01:0,6,83	./.	0/0:11,0:8:0.89:0,1,2	./.	1/1:15,0:9:2.92:19,3,0	1/1:17,1:9:14.12:112,14,0	1/1:16,0:13:2.36:18,2,0	1/1:21,1:17:35.87:268,36,0	./.	0/0:36,0:36:75.07:0,75,1273	1/1:10,1:11:2.20:43,2,0	1/1:7,0:6:2.97:20,3,0	./.	0/1:11,0:10:0.03:0,0,0	1/1:15,0:14:7.51:69,8,0	0/1:14,2:13:77.15:77,0,77	1/1:8,2:7:16.93:150,17,0	./.	0/0:13,10:16:0.47:0,0,1	./.	0/0:14,0:14:20.87:0,21,307	0/0:23,0:20:22.50:0,22,468	0/1:13,0:11:0.03:0,0,0	0/1:14,1:12:8.34:145,0,8	0/0:5,0:4:0.49:0,0,2	0/0:6,1:5:2.22:0,2,7
chr10	35952077	.	GAC	G	502.86	PASS	AB=1.000;AC=22;AF=0.550;AN=40;BaseQRankSum=6.553;DP=382;FS=4.102;HRun=0;HaplotypeScore=77.4571;InbreedingCoeff=0.4609;MQ=29.83;MQ0=34;MQRankSum=-7.041;QD=3.49;ReadPosRankSum=-2.499;VQSLOD=1.5908;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	1/1:8,0:7:1.93:6,2,0	0/0:11,0:2:6.02:0,6,116	./.	./.	./.	1/1:14,0:10:2.90:18,3,0	1/1:11,0:4:8.14:46,8,0	1/1:9,6:12:5.85:57,6,0	1/1:21,0:16:7.96:181,8,0	./.	0/0:35,0:35:69.23:0,69,1317	1/1:7,0:7:3.50:46,4,0	1/1:6,0:5:2.98:21,3,0	./.	1/1:8,2:9:0.05:1,0,0	1/1:12,3:14:13.92:90,14,0	0/0:14,0:11:0.70:0,1,75	1/1:8,0:6:6.69:44,7,0	./.	0/0:23,0:16:0.47:0,0,1	./.	0/0:14,0:14:26.93:0,27,486	0/0:23,0:20:22.37:0,22,508	0/1:14,0:12:0.03:0,0,0	0/1:15,0:12:27.02:124,0,27	0/0:5,0:4:2.65:0,3,16	0/0:8,0:6:2.22:0,2,7
chr10	35952097	.	GACACAC	G	246.06	PASS	AB=0.951;AC=20;AF=0.455;AN=44;BaseQRankSum=5.897;DP=360;FS=24.403;HRun=0;HaplotypeScore=64.4889;InbreedingCoeff=0.3257;MQ=31.10;MQ0=31;MQRankSum=-5.815;QD=2.02;ReadPosRankSum=-1.787;VQSLOD=-0.1025;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	1/1:3,2:4:4.83:44,5,0	0/0:22,0:5:10.55:0,11,238	0/0:54,0:1:3.01:0,3,31	./.	1/1:5,0:4:0.47:1,0,0	0/1:10,0:9:0:0,0,0	1/1:15,0:11:18.61:106,19,0	1/1:7,5:9:2.99:23,3,0	0/1:11,1:11:14:48,0,14	./.	0/0:37,0:37:86.83:0,87,2452	0/0:5,0:4:5.05:0,5,19	1/1:3,0:2:0.89:2,1,0	./.	1/1:3,2:4:3.22:13,3,0	1/1:9,2:9:7.73:71,8,0	0/1:13,0:11:0.13:0,0,58	0/1:8,0:6:6.40:6,0,32	./.	0/0:18,3:16:0.89:0,1,2	./.	0/0:19,0:18:44.90:0,45,1359	0/0:25,0:24:33.11:0,33,939	0/1:9,0:7:0:0,0,0	0/1:11,1:9:56.37:56,0,59	0/0:2,0:2:1.75:0,2,5	0/0:6,2:6:3.28:0,3,9
chr10	35952109	.	G	GAC	85.67	PASS	AB=0.985;AC=9;AF=0.237;AN=38;BaseQRankSum=3.042;DP=350;FS=5.889;HRun=0;HaplotypeScore=51.5701;InbreedingCoeff=0.0632;MQ=31.34;MQ0=33;MQRankSum=-3.151;QD=0.85;ReadPosRankSum=-2.057;VQSLOD=0.1515;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/0:4,0:3:5.42:0,5,23	0/0:20,0:5:11.57:0,12,95	0/0:48,0:1:3:0,3,27	./.	0/0:4,1:4:0:0,0,0	./.	0/1:20,0:15:50.68:85,0,51	1/1:10,0:7:2.96:19,3,0	0/1:11,1:11:61.67:62,0,66	./.	0/0:35,0:35:66.11:0,66,936	0/0:6,0:5:3.22:0,3,13	./.	./.	0/0:4,0:3:0:0,0,0	0/1:13,0:10:3.73:4,0,13	0/1:9,0:8:9.62:10,0,14	0/1:12,0:6:8.42:8,0,26	./.	1/1:22,3:17:0.47:1,0,0	./.	0/0:23,0:21:47.31:0,47,604	0/0:22,0:21:33.02:0,33,431	./.	0/0:11,0:6:12.69:0,13,117	0/0:2,0:2:2.97:0,3,20	0/0:8,0:6:5.88:0,6,36
chr10	35952175	.	GACACACACAC	G	540.55	PASS	AB=0.910;AC=21;AF=0.500;AN=42;BaseQRankSum=4.753;DP=323;FS=3.292;HRun=0;HaplotypeScore=53.6544;InbreedingCoeff=0.1414;MQ=32.50;MQ0=58;MQRankSum=-4.903;QD=4.50;ReadPosRankSum=-2.412;VQSLOD=1.1305;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	1/1:2,0:4:0.22:1,0,0	0/0:15,0:2:6.02:0,6,262	./.	0/0:5,0:4:3.48:0,3,69	1/1:11,0:10:5.23:42,5,0	./.	0/1:7,0:5:9.99:10,0,351	./.	0/1:17,0:16:99:149,0,197	0/0:6,0:3:3.01:0,3,63	0/0:28,0:27:51.18:0,51,1928	0/1:3,0:7:48.08:48,0,86	./.	./.	0/1:6,0:4:29.68:78,0,30	1/1:6,0:4:3.01:48,3,0	0/0:7,0:3:2.52:0,3,49	1/1:7,0:2:1.50:19,1,0	0/0:8,0:4:3.90:0,4,53	1/1:9,0:5:2.50:9,2,0	1/1:6,0:4:2.70:17,3,0	0/0:23,0:21:48.16:0,48,1850	0/0:31,0:27:54.18:0,54,2198	./.	0/1:13,1:11:99:128,0,203	1/1:2,8:9:2.98:63,3,0	1/1:7,6:10:6.01:61,6,0
chr10	35952177	.	C	CAG	179.81	PASS	AB=0.907;AC=13;AF=0.283;AN=46;BaseQRankSum=4.921;DP=311;FS=0.000;HRun=0;HaplotypeScore=36.7022;InbreedingCoeff=0.2140;MQ=33.10;MQ0=56;MQRankSum=-4.023;QD=1.98;ReadPosRankSum=-1.706;VQSLOD=1.0679;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:8,0:2:0:0,0,0	0/1:4,1:4:0.72:1,0,1	0/0:15,0:2:5.97:0,6,64	./.	0/0:5,0:4:2.81:0,3,18	0/0:9,0:8:0.99:0,1,3	1/1:12,0:8:2.92:17,3,0	0/0:7,0:5:9.03:0,9,132	./.	0/1:14,1:14:75.30:78,0,75	0/0:6,0:3:2.94:0,3,18	0/0:26,0:25:50.32:0,50,644	0/1:7,1:7:14.74:15,0,28	./.	./.	0/0:7,0:5:5.21:0,5,34	0/0:3,0:2:2.98:0,3,21	0/0:7,0:3:2.99:0,3,23	0/0:5,0:1:2.50:0,2,9	0/0:8,0:4:1.63:0,2,5	1/1:9,0:5:0.47:1,0,0	1/1:7,0:4:2.22:7,2,0	0/0:23,0:21:48.12:0,48,648	0/0:32,0:27:51:0,51,668	./.	0/1:12,2:11:74.75:98,0,75	0/0:10,0:9:0.26:0,0,1	1/1:12,1:10:6.01:75,6,0
chr10	35952395	.	AT	A	12018.98	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=7.743;DP=565;FS=3.121;HRun=8;HaplotypeScore=62.3618;InbreedingCoeff=0.9791;MQ=66.30;MQ0=0;MQRankSum=-0.710;QD=24.23;ReadPosRankSum=2.243;VQSLOD=5.7476;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,26:33:69.10:666,69,0	1/1:0,5:5:15.02:145,15,0	0/0:10,0:10:21.06:0,21,244	0/0:3,0:3:8.84:0,9,68	1/1:0,26:26:69.11:666,69,0	1/1:2,22:24:60.10:579,60,0	1/1:3,13:16:36.05:348,36,0	1/1:2,26:28:78.07:734,78,0	1/1:0,17:17:48.08:464,48,0	1/1:3,22:25:66.04:622,66,0	1/1:2,21:23:60.09:579,60,0	0/0:17,0:17:51.11:0,51,600	1/1:1,11:12:33.05:319,33,0	1/1:2,7:9:17.99:165,18,0	1/1:1,24:25:66.11:637,66,0	1/1:2,16:18:48.08:464,48,0	1/1:1,30:31:87.14:840,87,0	1/1:3,15:18:39.06:377,39,0	1/1:2,14:16:39.04:370,39,0	1/1:1,21:22:57.09:550,57,0	1/1:4,24:28:60.09:579,60,0	1/1:2,24:26:66.10:637,66,0	0/0:26,0:26:60.13:0,60,706	0/0:13,0:13:36.11:0,36,435	1/1:1,21:22:60.09:579,60,0	1/1:4,18:22:54.03:511,54,0	1/1:3,29:31:78.12:753,78,0	1/1:0,18:18:45.07:435,45,0
chr10	35954556	.	A	AT	1525.06	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-6.865;DP=701;FS=3.674;HRun=4;HaplotypeScore=71.5883;InbreedingCoeff=0.9226;MQ=83.56;MQ0=0;MQRankSum=-3.037;QD=34.66;ReadPosRankSum=-0.304;VQSLOD=4.0666;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,43:44:99:1620,120,0	0/0:7,0:7:21.06:0,21,238	0/0:23,0:21:32.85:0,33,408	0/0:23,0:23:13.67:0,14,373	0/0:23,0:23:66.19:0,66,748	0/0:22,0:22:60.17:0,60,681	0/0:29,0:29:75.21:0,75,850	0/0:38,0:38:93.23:0,93,1029	0/0:29,0:29:84.24:0,84,952	0/0:25,0:24:60.17:0,60,681	0/0:18,0:18:48.14:0,48,545	0/0:33,0:33:93.22:0,93,1025	0/0:29,0:29:87.25:0,87,986	0/0:28,0:28:81.23:0,81,919	0/0:31,0:31:93.25:0,93,1045	0/0:20,0:20:51.14:0,51,579	0/0:28,0:28:81.21:0,81,908	0/0:21,0:21:57.16:0,57,645	0/0:21,0:21:54.14:0,54,602	0/0:21,0:21:60.17:0,60,681	0/0:51,0:51:99:0,147,1667	0/0:19,0:19:51.13:0,51,567	0/0:18,0:18:51.15:0,51,578	0/0:22,0:22:63.18:0,63,714	0/0:18,0:18:45.13:0,45,510	0/0:35,0:35:99:0,99,1115	0/0:20,0:20:57.16:0,57,647	0/0:5,0:5:9.03:0,9,102
chr10	35955626	.	AAAAAG	A	295.72	PASS	AB=0.961;AC=18;AF=0.321;AN=56;BaseQRankSum=6.519;DP=425;FS=0.667;HRun=0;HaplotypeScore=72.1927;InbreedingCoeff=-0.3627;MQ=53.19;MQ0=36;MQRankSum=-5.389;QD=1.18;ReadPosRankSum=4.399;VQSLOD=1.2572;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:19:35.30:0,35,578	0/1:3,0:3:13.16:13,0,18	0/0:46,0:7:5.37:0,5,131	0/1:72,0:17:27.22:27,0,121	0/0:23,0:22:44.69:0,45,381	0/1:9,0:9:15.29:15,0,38	0/1:4,2:6:26.52:31,0,27	0/1:32,1:31:41.82:42,0,312	0/0:3,0:2:5.95:0,6,51	0/1:13,0:11:8.71:9,0,136	0/1:14,0:14:49.25:49,0,72	0/0:13,0:11:22.23:0,22,429	0/1:5,0:5:7.85:8,0,18	0/1:4,0:4:15.58:20,0,16	1/1:4,0:4:2.52:16,3,0	0/0:8,0:8:17.65:0,18,144	0/0:24,0:22:24.52:0,25,313	0/1:19,0:16:10.02:10,0,101	0/0:21,0:20:11.81:0,12,251	0/1:17,1:18:59.31:59,0,162	0/0:4,1:5:5.97:0,6,45	0/0:1,0:1:2.74:0,3,12	0/1:6,0:6:7.45:7,0,45	0/0:8,0:8:11.30:0,11,105	0/1:13,0:12:38.88:65,0,39	0/1:12,0:11:37.41:37,0,109	0/1:6,4:9:28.36:28,0,45	0/1:9,0:8:10.79:11,0,57
chr10	35956635	.	A	AG	1114.82	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-7.301;DP=634;FS=25.113;HRun=2;HaplotypeScore=59.9304;InbreedingCoeff=0.9980;MQ=68.49;MQ0=1;MQRankSum=-2.789;QD=32.79;ReadPosRankSum=1.230;VQSLOD=1.7651;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,30:34:84.28:1210,84,0	0/0:9,0:9:27.07:0,27,321	0/0:19,0:17:42.13:0,42,520	0/0:27,0:27:75.71:0,76,930	0/0:33,0:33:93.29:0,93,1151	0/0:14,0:14:33.10:0,33,409	0/0:20,0:20:60.19:0,60,744	0/0:37,0:37:99:0,102,1253	0/0:31,0:31:87.24:0,87,1051	0/0:33,0:33:96.30:0,96,1188	0/0:18,0:18:51.16:0,51,632	0/0:15,0:15:45.14:0,45,557	0/0:11,0:11:30.09:0,30,371	0/0:23,0:23:69.20:0,69,841	0/0:22,0:21:51.16:0,51,632	0/0:25,0:25:69.22:0,69,853	0/0:25,0:25:69.22:0,69,854	0/0:14,0:14:39.12:0,39,481	0/0:21,0:20:57.18:0,57,705	0/0:16,0:16:48.15:0,48,595	0/0:54,0:54:99:0,162,1971	0/0:14,0:14:42.13:0,42,521	0/0:18,0:18:54.17:0,54,669	0/0:16,0:16:45.14:0,45,557	0/0:16,0:15:45.14:0,45,556	0/0:27,0:27:81.25:0,81,1005	0/0:23,0:23:66.19:0,66,804	0/0:18,0:18:54.17:0,54,669
chr10	35957540	.	A	AG	148.50	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=0.389;DP=591;FS=2.787;HRun=0;HaplotypeScore=67.3713;InbreedingCoeff=0.7439;MQ=38.49;MQ0=73;MQRankSum=-3.397;QD=5.94;ReadPosRankSum=2.683;VQSLOD=3.4861;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:14,11:18:12.38:235,12,0	0/0:9,0:7:17.94:0,18,182	0/0:41,0:5:7.64:0,8,49	0/0:22,0:4:2.68:0,3,11	0/0:27,0:21:42.12:0,42,316	0/0:20,0:19:45.39:0,45,419	0/0:15,0:13:20.88:0,21,172	0/0:26,0:23:64.97:0,65,529	0/0:10,0:7:11.87:0,12,81	0/0:23,0:20:53.26:0,53,485	0/0:24,0:20:44.33:0,44,431	0/0:15,0:15:35.71:0,36,278	0/0:11,0:8:20.85:0,21,157	0/0:12,0:12:29.64:0,30,222	0/0:24,0:19:47.03:0,47,353	0/0:18,0:14:38.78:0,39,304	0/0:40,0:33:32.63:0,33,239	0/0:22,0:18:38.92:0,39,310	0/0:27,0:22:54.63:0,55,461	0/0:20,0:17:47.02:0,47,374	0/0:23,0:22:39.79:0,40,429	0/0:14,0:11:23.42:0,23,207	0/0:11,0:10:22.99:0,23,160	0/0:24,0:16:26.76:0,27,201	0/0:23,0:22:47.26:0,47,399	0/0:20,0:17:44.07:0,44,343	0/0:23,0:20:50.17:0,50,401	0/0:22,0:18:52.91:0,53,427
chr10	35957791	.	T	TACACAC	5616.63	PASS	AB=1.000;AC=43;AF=0.827;AN=52;BaseQRankSum=-0.788;DP=526;FS=0.800;HRun=0;HaplotypeScore=134.2838;InbreedingCoeff=0.4428;MQ=66.42;MQ0=5;MQRankSum=-2.212;QD=12.79;ReadPosRankSum=-1.736;VQSLOD=3.5762;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:26:2.17:0,2,279	1/1:8,0:8:2.99:24,3,0	./.	./.	0/1:13,0:13:0:0,0,0	1/1:12,3:20:15.51:283,16,0	1/1:38,0:41:13.90:474,14,0	1/1:25,0:23:4.03:142,4,0	1/1:10,0:10:6.49:144,6,0	1/1:14,0:13:20.94:317,21,0	1/1:14,1:15:18.05:350,18,0	0/0:11,0:11:12.02:0,12,206	1/1:8,3:11:15.03:377,15,0	1/1:11,0:11:8.01:139,8,0	1/1:9,4:19:6.49:193,6,0	1/1:15,0:17:15.02:231,15,0	1/1:27,0:27:29.11:561,29,0	1/1:12,2:25:18.06:461,18,0	1/1:13,0:13:6.89:83,7,0	1/1:9,0:13:8.17:113,8,0	1/1:39,0:40:29.29:438,29,0	0/1:15,0:15:49.82:111,0,50	0/0:12,0:12:11.83:0,12,231	0/1:27,0:27:13.71:14,0,462	1/1:12,1:14:15.02:276,15,0	1/1:24,0:23:38.90:514,39,0	1/1:23,0:25:26.83:296,27,0	1/1:4,0:10:6.02:77,6,0
chr10	35957854	.	GGT	G	2471.10	PASS	AB=0.952;AC=45;AF=0.865;AN=52;BaseQRankSum=-0.354;DP=539;FS=1.598;HRun=0;HaplotypeScore=102.6045;InbreedingCoeff=0.4786;MQ=59.15;MQ0=7;MQRankSum=-0.169;QD=5.63;ReadPosRankSum=0.354;VQSLOD=2.8013;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:31:6.47:28,6,0	1/1:4,0:5:5.84:39,6,0	./.	./.	1/1:10,1:20:11.68:85,12,0	1/1:10,1:10:5.98:53,6,0	1/1:25,7:34:26.40:219,26,0	0/0:18,0:18:0.22:0,0,0	1/1:9,0:15:11.36:56,11,0	1/1:13,4:17:12.01:120,12,0	1/1:10,2:14:19.66:169,20,0	0/0:9,0:12:6.01:0,6,71	1/1:9,4:18:23.19:210,23,0	1/1:9,8:18:14.87:145,15,0	1/1:11,2:13:6.49:66,6,0	1/1:9,0:13:11.36:56,11,0	1/1:9,0:19:8.99:42,9,0	1/1:17,4:26:35.19:274,35,0	1/1:19,1:18:3.01:33,3,0	1/1:15,2:20:14.69:118,15,0	1/1:28,11:40:14.86:145,15,0	1/1:15,4:19:24.04:252,24,0	0/0:11,0:11:11.98:0,12,131	0/1:14,1:19:23.74:24,0,43	1/1:10,6:17:11.70:110,12,0	1/1:14,1:16:11.75:87,12,0	1/1:9,4:15:13.87:106,14,0	1/1:12,3:17:17.68:158,18,0
chr10	35958947	.	C	CTTT	2243.97	PASS	AB=0.981;AC=38;AF=0.679;AN=56;BaseQRankSum=-0.104;DP=342;FS=6.140;HRun=15;HaplotypeScore=67.6923;InbreedingCoeff=0.3896;MQ=68.61;MQ0=12;MQRankSum=-4.237;QD=8.10;ReadPosRankSum=-2.194;VQSLOD=-0.7095;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:15:1.84:0,2,17	1/1:7,0:10:12.04:170,12,0	0/0:19,0:11:0.31:0,0,16	0/1:14,0:11:8.15:8,0,58	1/1:15,0:14:0.47:1,0,0	1/1:8,7:17:4.09:90,4,0	1/1:1,0:1:3.01:51,3,0	1/1:14,6:13:17.09:105,17,0	1/1:11,0:11:0.47:1,0,0	0/1:14,0:14:3.85:201,0,4	1/1:3,4:8:9.03:141,9,0	0/0:10,0:10:4.17:0,4,147	0/0:4,0:6:2.80:0,3,14	1/1:11,0:11:12.86:67,13,0	1/1:2,4:6:4.57:55,5,0	0/1:11,0:11:0:1,0,0	0/1:14,0:14:0:1,0,0	1/1:11,0:13:15.89:174,16,0	1/1:8,3:15:23.96:259,24,0	1/1:9,0:8:14.96:160,15,0	0/1:3,0:2:0:0,0,0	1/1:6,1:7:6:74,6,0	0/0:6,0:8:5.35:0,5,58	0/0:5,0:4:5.83:0,6,59	1/1:8,13:24:24.15:271,24,0	0/1:14,1:15:11.82:254,0,12	1/1:19,0:17:18.01:153,18,0	1/1:3,5:14:10.59:148,11,0
chr10	35959454	.	A	AG	4320.52	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-2.822;DP=521;FS=3.053;HRun=3;HaplotypeScore=54.9836;InbreedingCoeff=0.9797;MQ=89.66;MQ0=1;MQRankSum=-2.302;QD=34.84;ReadPosRankSum=3.218;VQSLOD=5.4643;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,45:47:99:1762,126,0	0/0:5,0:5:15.03:0,15,168	0/0:24,0:24:63.17:0,63,735	0/0:16,0:16:42.12:0,42,494	1/1:0,21:21:38.69:544,39,0	0/0:20,0:20:57.16:0,57,671	0/0:18,0:18:51.16:0,51,612	0/0:33,0:33:90.25:0,90,1060	1/1:0,17:17:45.15:630,45,0	0/0:19,0:19:54.14:0,54,621	0/0:16,0:16:36.10:0,36,420	0/0:17,0:17:51.13:0,51,591	0/0:13,0:13:39.12:0,39,468	0/0:16,0:16:42.12:0,42,492	0/0:15,0:15:45.13:0,45,528	1/1:0,13:13:27.09:378,27,0	1/1:1,25:26:72.24:1006,72,0	0/0:13,0:13:36.11:0,36,431	0/0:32,0:32:90.25:0,90,1060	0/0:11,0:11:33.10:0,33,395	0/0:49,0:49:99:0,141,1666	0/0:4,0:4:12.04:0,12,144	0/0:6,0:6:18.06:0,18,216	0/0:22,0:22:63.12:0,63,714	0/0:10,0:10:27.07:0,27,313	0/0:17,0:17:45.12:0,45,529	0/0:17,0:16:45.11:0,45,516	0/0:4,0:4:12.04:0,12,144
chr10	35959799	.	CGTGTGT	C	3087.15	PASS	AB=0.823;AC=33;AF=0.635;AN=52;BaseQRankSum=4.358;DP=531;FS=9.738;HRun=0;HaplotypeScore=114.1526;InbreedingCoeff=0.4870;MQ=60.62;MQ0=6;MQRankSum=-6.189;QD=9.44;ReadPosRankSum=-0.261;VQSLOD=1.9394;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:40:24.55:336,25,0	1/1:3,1:4:2.24:60,2,0	./.	./.	0/0:13,0:13:2.84:0,3,77	0/1:14,6:20:28.64:229,0,29	1/1:18,13:31:2.96:405,3,0	0/0:22,0:22:1.55:0,2,4	0/0:2,0:18:6.02:0,6,156	1/1:3,6:9:12.04:233,12,0	0/1:7,1:7:0:0,0,0	0/0:17,0:17:24.05:0,24,521	1/1:6,4:10:15.05:305,15,0	1/1:12,0:13:6.02:103,6,0	1/1:11,5:16:12.04:225,12,0	0/0:1,0:14:2.95:0,3,77	0/0:1,0:30:6.49:0,6,133	1/1:12,5:20:17.92:328,18,0	1/1:26,0:26:1.73:40,2,0	1/1:5,2:7:6.02:122,6,0	0/1:36,11:47:47.77:48,0,84	1/1:10,1:14:12.01:151,12,0	0/0:7,0:7:12.03:0,12,206	0/0:26,0:29:62.35:0,62,1464	1/1:2,4:6:9.03:183,9,0	1/1:25,3:28:4.73:120,5,0	1/1:11,9:20:14.84:305,15,0	1/1:6,0:6:2.75:61,3,0
chr10	35960245	.	A	ATG	6954.90	PASS	AB=0.786;AC=36;AF=0.720;AN=50;BaseQRankSum=-7.666;DP=287;FS=0.000;HRun=0;HaplotypeScore=34.9196;InbreedingCoeff=0.5668;MQ=63.73;MQ0=5;MQRankSum=0.017;QD=28.86;ReadPosRankSum=3.293;VQSLOD=5.5962;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:4:2.99:0,3,23	1/1:0,5:4:9.03:150,9,0	0/1:4,0:3:17.34:24,0,17	0/0:10,0:3:1.30:0,1,8	./.	1/1:3,19:20:16.80:577,17,0	1/1:0,4:3:9.03:151,9,0	1/1:4,19:23:56.99:689,57,0	./.	1/1:10,6:16:28.74:492,29,0	1/1:2,8:11:11.90:339,12,0	0/0:4,0:4:12.02:0,12,137	1/1:0,8:8:15.05:251,15,0	1/1:3,7:10:18.04:274,18,0	1/1:3,9:12:14.91:389,15,0	./.	0/0:10,0:10:0:0,0,0	1/1:1,24:24:42.14:701,42,0	1/1:4,9:12:23.96:268,24,0	1/1:2,16:18:30.10:500,30,0	1/1:0,3:3:3.01:50,3,0	1/1:1,3:4:9.03:151,9,0	0/0:7,0:7:18.04:0,18,213	0/0:4,0:4:9.01:0,9,99	1/1:0,9:9:21.07:351,21,0	0/1:5,15:20:18.64:633,0,19	1/1:5,21:27:11.76:663,12,0	1/1:0,7:7:18.06:301,18,0
chr10	35961143	.	AGGAGAG	A	4608.97	PASS	AB=0.900;AC=9;AF=0.161;AN=56;BaseQRankSum=10.521;DP=720;FS=0.935;HRun=0;HaplotypeScore=154.3248;InbreedingCoeff=0.8675;MQ=70.13;MQ0=3;MQRankSum=-12.906;QD=34.92;ReadPosRankSum=0.402;VQSLOD=4.8346;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,126,3660	0/0:19,0:19:51.18:0,51,1680	0/0:27,0:22:48.03:0,48,1289	0/0:37,0:31:54.32:0,54,1454	1/1:9,29:37:69.15:1246,69,0	0/0:15,0:15:36.12:0,36,1178	0/0:25,0:25:66.23:0,66,2173	0/0:32,0:32:72.25:0,72,2331	1/1:5,32:37:75.22:1572,75,0	0/0:24,0:24:54.19:0,54,1818	0/0:22,0:22:60.21:0,60,1854	0/0:22,0:22:57.20:0,57,1870	0/0:22,0:22:60.21:0,60,1891	0/0:19,0:19:42.14:0,42,1426	0/0:28,0:28:78.25:0,78,2346	1/1:7,23:29:48.16:1052,48,0	1/1:5,13:18:33.11:697,33,0	0/1:8,1:9:41.70:42,0,667	0/0:19,0:19:48.15:0,48,1436	0/0:30,0:30:81.26:0,81,2650	0/0:41,0:41:99:0,111,3453	0/0:33,0:33:87.27:0,87,2684	0/0:16,0:16:39.13:0,39,1319	0/0:17,0:17:45.15:0,45,1438	0/0:17,0:16:51.16:0,51,1634	0/0:40,0:40:93.31:0,93,2987	0/0:21,0:21:51.17:0,51,1718	0/0:16,0:16:42.14:0,42,1390
chr10	35962646	.	G	GT	67.82	PASS	AB=0.619;AC=1;AF=0.018;AN=56;BaseQRankSum=1.254;DP=262;FS=11.044;HRun=10;HaplotypeScore=37.6395;InbreedingCoeff=0.0716;MQ=68.56;MQ0=4;MQRankSum=-1.514;QD=5.22;ReadPosRankSum=1.826;VQSLOD=0.1018;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:5,8:13:6.60:142,0,7	0/0:4,0:4:5.96:0,6,49	0/0:20,0:8:1.31:0,1,35	0/0:10,0:5:8.66:0,9,49	0/0:9,0:10:22.98:0,23,175	0/0:7,0:7:20.96:0,21,169	0/0:9,0:9:23.97:0,24,197	0/0:31,0:29:65.90:0,66,542	0/0:8,0:8:23.96:0,24,194	0/0:6,0:6:14.97:0,15,123	0/0:1,0:1:3:0,3,25	0/0:8,0:8:20.97:0,21,172	0/0:7,0:7:11.95:0,12,98	0/0:7,0:7:20.98:0,21,172	0/0:6,0:6:11.98:0,12,98	0/0:9,0:9:23.35:0,23,180	0/0:17,0:18:40.98:0,41,326	0/0:16,0:17:37.97:0,38,299	0/0:16,0:16:38.94:0,39,319	0/0:5,0:5:2.96:0,3,25	0/0:5,0:5:14.98:0,15,123	0/0:6,0:6:11.94:0,12,94	0/0:7,0:7:17.96:0,18,148	0/0:6,0:6:17.98:0,18,148	0/0:7,0:7:14.97:0,15,123	0/0:6,0:6:14.87:0,15,114	0/0:6,0:6:14.97:0,15,123	0/0:6,0:6:17.98:0,18,148
chr10	35962784	.	A	ATCTC	263.67	PASS	AB=1.000;AC=9;AF=0.214;AN=42;BaseQRankSum=3.377;DP=149;FS=7.851;HRun=0;HaplotypeScore=51.0134;InbreedingCoeff=0.4793;MQ=102.98;MQ0=0;MQRankSum=-0.658;QD=5.38;ReadPosRankSum=1.009;VQSLOD=0.4052;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:15:2.57:22,3,0	0/0:1,0:1:3.01:0,3,39	0/1:13,0:9:0.35:0,0,113	0/0:26,0:16:4.58:0,5,300	0/0:4,1:6:0:0,0,0	0/0:1,0:1:3.01:0,3,59	0/0:4,0:4:12.04:0,12,229	0/0:14,0:13:33.10:0,33,553	1/1:2,0:2:3:25,3,0	./.	./.	0/0:6,0:6:18.04:0,18,303	./.	0/0:1,0:1:3.01:0,3,50	./.	1/1:1,2:3:3.01:69,3,0	1/1:9,6:16:13.89:263,14,0	0/0:7,0:7:9.03:0,9,179	0/0:6,0:6:18.06:0,18,329	0/0:3,0:3:9:0,9,110	./.	./.	0/0:4,0:4:12.03:0,12,205	0/0:5,0:5:12.04:0,12,229	./.	0/0:3,0:3:6.02:0,6,120	0/0:2,0:2:3.01:0,3,49	0/0:8,0:8:24.08:0,24,391
chr10	35962804	.	G	GTA	162.17	PASS	AB=1.000;AC=16;AF=0.533;AN=30;BaseQRankSum=0.348;DP=114;FS=1.556;HRun=0;HaplotypeScore=48.9311;InbreedingCoeff=0.5269;MQ=106.76;MQ0=0;MQRankSum=-2.213;QD=3.00;ReadPosRankSum=-0.599;VQSLOD=1.2766;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:5:0.53:0,1,1	./.	0/1:13,0:5:0.01:0,0,1	0/0:29,0:20:27.04:0,27,182	./.	./.	1/1:3,0:3:0.94:2,1,0	1/1:7,0:6:2.41:26,2,0	./.	./.	./.	0/0:3,0:3:9.03:0,9,138	./.	./.	./.	1/1:0,2:2:3.01:45,3,0	1/1:5,7:12:13.76:144,14,0	1/1:8,0:8:3.02:24,3,0	1/1:3,0:3:0.37:0,0,0	./.	./.	./.	0/0:6,0:6:15.05:0,15,227	0/0:6,0:6:18.03:0,18,230	./.	0/0:2,0:2:0.47:0,0,1	0/1:2,0:2:0:0,0,0	1/1:4,0:4:3.46:24,3,0
chr10	35962815	.	TGC	T	170.76	PASS	AB=0.758;AC=7;AF=0.219;AN=32;BaseQRankSum=2.375;DP=119;FS=14.406;HRun=0;HaplotypeScore=49.9759;InbreedingCoeff=0.1442;MQ=84.94;MQ0=1;MQRankSum=-3.094;QD=4.88;ReadPosRankSum=-0.369;VQSLOD=0.1707;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:4:1.21:0,1,3	./.	0/0:13,0:4:1.31:0,1,4	0/0:21,0:12:3.64:0,4,108	0/0:10,0:9:12.50:0,13,147	./.	./.	0/1:5,1:6:69.71:74,0,70	0/0:1,0:1:3.01:0,3,47	./.	./.	0/0:5,0:5:15.05:0,15,279	./.	./.	./.	0/0:5,0:5:2.90:0,3,16	0/1:14,2:16:70.64:71,0,99	0/1:1,8:9:9:32,0,9	1/1:1,1:2:5.98:59,6,0	./.	./.	./.	0/0:8,0:8:15:0,15,302	0/0:6,0:6:18.06:0,18,354	0/0:2,0:2:2.71:0,3,12	1/1:1,1:2:3.01:38,3,0	0/0:2,1:3:2.62:0,3,17	./.
chr10	35963730	.	T	TC	1126.11	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=0.215;DP=457;FS=4.896;HRun=1;HaplotypeScore=79.8557;InbreedingCoeff=0.8302;MQ=66.05;MQ0=10;MQRankSum=1.118;QD=12.51;ReadPosRankSum=4.897;VQSLOD=2.5603;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:16,0:15:0.20:0,0,33	0/0:3,0:3:9.01:0,9,94	0/0:23,0:12:17.36:0,17,178	0/0:12,0:6:8.95:0,9,81	1/1:6,12:18:29.90:342,30,0	0/0:22,0:22:50.67:0,51,599	0/0:10,0:10:26.90:0,27,238	0/0:27,0:22:47.36:0,47,462	1/1:2,17:18:7.87:272,8,0	0/0:21,0:20:39.80:0,40,413	0/0:21,0:21:48.03:0,48,544	0/0:14,0:14:29.99:0,30,334	0/0:11,0:11:26.97:0,27,281	0/0:12,0:12:11.98:0,12,101	0/0:25,0:25:44.83:0,45,461	1/1:1,12:13:26.84:317,27,0	1/1:8,16:22:29.72:348,30,0	0/0:21,0:21:28.96:0,29,322	0/0:18,0:17:38.75:0,39,357	0/0:6,0:6:8.66:0,9,137	0/0:7,0:6:15.46:0,15,128	0/0:9,0:9:20.99:0,21,222	0/0:7,0:7:9.01:0,9,94	0/0:9,0:9:13.37:0,13,165	0/0:29,0:27:55.74:0,56,531	0/0:26,0:25:55.21:0,55,509	0/0:21,0:21:45.36:0,45,462	0/0:13,0:12:21.91:0,22,267
chr10	35965638	.	GAGAGAT	G	727.26	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=4.899;DP=632;FS=0.608;HRun=0;HaplotypeScore=190.4430;InbreedingCoeff=0.9030;MQ=54.40;MQ0=11;MQRankSum=-6.411;QD=8.36;ReadPosRankSum=0.716;VQSLOD=2.7724;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:39.22:0,39,605	0/0:9,0:9:20.97:0,21,194	0/0:16,0:9:8.44:0,8,185	0/0:28,0:11:22.21:0,22,198	1/1:20,0:20:25.56:216,26,0	0/0:22,0:22:50.59:0,51,549	0/0:20,0:20:38.98:0,39,429	0/0:41,0:38:99:0,107,928	1/1:28,1:28:1.43:138,1,0	0/0:30,0:27:69.63:0,70,890	0/0:18,0:17:20.96:0,21,286	0/0:17,0:16:42.11:0,42,1080	0/0:22,0:21:56.11:0,56,679	0/0:13,0:10:23.98:0,24,249	0/0:18,0:16:38.96:0,39,432	1/1:18,3:21:32.26:428,32,0	1/1:17,0:16:11.56:92,12,0	0/0:21,0:20:55.81:0,56,600	0/0:28,0:24:67.58:0,68,649	0/0:20,0:20:35.85:0,36,357	0/0:17,0:16:27.18:0,27,347	0/0:23,0:21:50.65:0,51,490	0/0:15,0:15:29.82:0,30,611	0/0:28,0:28:63.58:0,64,1408	0/0:24,0:23:56.58:0,57,606	0/0:25,0:24:67.90:0,68,958	0/0:34,0:32:68.71:0,69,805	0/0:20,0:18:42.43:0,42,470
chr10	35965640	.	GAGAT	G	1760.58	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=2.296;DP=626;FS=0.000;HRun=0;HaplotypeScore=166.3811;InbreedingCoeff=0.9722;MQ=54.76;MQ0=10;MQRankSum=-4.990;QD=20.24;ReadPosRankSum=-0.126;VQSLOD=3.2334;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:36.05:0,36,509	0/0:10,0:10:23.95:0,24,195	0/0:16,0:9:11.95:0,12,189	0/0:28,0:11:19.15:0,19,147	1/1:4,16:20:26.83:425,27,0	0/0:23,0:23:52.57:0,53,465	0/0:19,0:19:32.81:0,33,343	0/0:40,0:38:95.86:0,96,822	1/1:4,25:29:26.98:464,27,0	0/0:30,0:27:67.32:0,67,733	0/0:17,0:17:20.94:0,21,236	0/0:18,0:17:42.10:0,42,889	0/0:22,0:21:56.17:0,56,564	0/0:13,0:10:17.90:0,18,165	0/0:18,0:16:41.86:0,42,364	1/1:16,5:21:59.78:841,60,0	1/1:2,14:15:11.95:188,12,0	0/0:22,0:21:52.89:0,53,517	0/0:26,0:22:56.44:0,56,553	0/0:19,0:19:35.17:0,35,314	0/0:17,0:16:26.65:0,27,299	0/0:21,0:19:44.28:0,44,387	0/0:15,0:15:16.07:0,16,458	0/0:27,0:27:60.55:0,61,1140	0/0:24,0:23:56.32:0,56,509	0/0:25,0:24:66.83:0,67,782	0/0:34,0:32:65.49:0,65,644	0/0:20,0:18:41.90:0,42,415
chr10	35965643	.	ATAT	A	118.48	PASS	AB=0.960;AC=11;AF=0.196;AN=56;BaseQRankSum=6.214;DP=567;FS=24.813;HRun=0;HaplotypeScore=142.4320;InbreedingCoeff=-0.0950;MQ=58.10;MQ0=10;MQRankSum=-8.385;QD=0.53;ReadPosRankSum=-4.197;VQSLOD=-0.2961;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:29.24:0,29,901	0/0:10,0:10:24.08:0,24,559	0/0:16,0:9:21.23:0,21,527	0/0:29,0:12:28.97:0,29,422	0/1:19,0:19:20.30:20,0,33	0/0:20,0:20:35.59:0,36,1151	0/0:14,0:14:35.94:0,36,845	0/0:31,0:29:10.30:0,10,1718	0/1:28,1:28:23.66:32,0,24	0/1:26,0:24:34.84:35,0,1332	0/0:14,5:19:23.90:0,24,598	0/0:16,0:15:39.13:0,39,946	0/0:21,0:20:57.20:0,57,1283	0/0:12,0:11:7.93:0,8,463	0/0:19,0:17:10.32:0,10,998	0/1:18,2:20:41.18:41,0,125	1/1:14,0:13:3.59:9,4,0	0/1:22,0:21:15.08:15,0,1026	0/0:23,0:21:18.35:0,18,1243	0/0:15,0:15:4.23:0,4,662	0/0:15,1:15:30.11:0,30,746	0/1:21,0:19:33.69:34,0,913	0/0:13,0:13:26.93:0,27,623	0/0:24,0:24:63.22:0,63,1460	0/1:20,1:20:56.67:57,0,1010	0/1:22,0:21:10.45:10,0,1127	0/1:23,7:29:7.02:7,0,1235	0/0:18,0:16:42.14:0,42,959
chr10	35966000	.	CTA	C	16824.58	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=12.586;DP=627;FS=4.568;HRun=0;HaplotypeScore=79.1249;InbreedingCoeff=0.9998;MQ=94.60;MQ0=1;MQRankSum=-4.897;QD=42.70;ReadPosRankSum=2.604;VQSLOD=6.2833;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:51.17:0,51,961	1/1:0,15:15:42.14:643,42,0	0/0:32,0:32:90.21:0,90,1671	0/0:24,0:24:69.07:0,69,1253	0/0:30,0:30:87.30:0,87,1671	1/1:0,27:27:78.26:1195,78,0	1/1:2,19:21:54.18:827,54,0	1/1:1,37:38:99:1652,111,0	0/0:26,0:26:78.27:0,78,1497	1/1:1,20:21:60.19:896,60,0	1/1:0,18:18:48.16:735,48,0	0/0:20,0:20:57.20:0,57,1093	1/1:0,19:19:54.18:827,54,0	1/1:0,13:13:33.11:505,33,0	1/1:0,20:20:54.18:827,54,0	0/0:22,0:22:66.23:0,66,1275	0/0:27,0:27:81.28:0,81,1565	1/1:0,28:28:84.29:1286,84,0	1/1:0,23:23:69.23:1047,69,0	1/1:0,28:28:75.25:1148,75,0	1/1:0,24:23:69.23:1057,69,0	1/1:0,23:23:60.20:918,60,0	0/0:20,0:20:60.21:0,60,1147	0/0:14,0:14:42.14:0,42,811	1/1:0,17:17:48.16:735,48,0	1/1:0,26:26:78.26:1195,78,0	1/1:1,22:23:60.20:919,60,0	1/1:0,10:10:27.09:413,27,0
chr10	35966229	.	G	GCACA	8198.31	PASS	AB=0.781;AC=32;AF=0.571;AN=56;BaseQRankSum=2.248;DP=755;FS=0.000;HRun=0;HaplotypeScore=166.2889;InbreedingCoeff=0.2421;MQ=55.77;MQ0=25;MQRankSum=-4.046;QD=15.35;ReadPosRankSum=-0.834;VQSLOD=4.4802;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:30:9.32:157,9,0	1/1:3,5:10:14.97:271,15,0	0/0:62,0:10:1.31:0,1,49	0/1:84,0:18:25.88:34,0,26	0/0:24,0:24:26.96:0,27,521	0/1:6,13:22:20.23:291,0,20	0/1:20,6:27:50.73:287,0,51	0/1:19,3:23:3.34:502,0,3	0/0:20,0:19:15.06:0,15,441	1/1:9,10:22:39.04:722,39,0	1/1:9,2:16:11.99:189,12,0	0/0:31,0:32:81.25:0,81,1264	1/1:12,10:26:38.91:767,39,0	0/1:8,8:22:17.34:313,0,17	0/1:11,11:23:17.16:360,0,17	0/0:31,0:30:66:0,66,774	0/1:17,0:17:17.03:17,0,287	1/1:7,9:18:30.03:619,30,0	0/1:21,0:20:54.33:225,0,54	0/1:10,15:30:23.66:270,0,24	0/1:21,7:32:18.60:329,0,19	1/1:8,12:24:23.86:456,24,0	0/0:26,0:29:44.56:0,45,819	0/0:20,0:23:45.14:0,45,681	1/1:9,17:27:18.06:435,18,0	1/1:13,12:32:43.47:1217,43,0	1/1:7,10:19:26.99:497,27,0	1/1:0,5:7:12.01:239,12,0
chr10	35966254	.	CAT	C	2648.18	PASS	AB=0.986;AC=26;AF=0.464;AN=56;BaseQRankSum=-5.216;DP=755;FS=5.124;HRun=0;HaplotypeScore=174.2491;InbreedingCoeff=-0.4915;MQ=64.55;MQ0=20;MQRankSum=1.276;QD=4.81;ReadPosRankSum=-7.721;VQSLOD=0.0806;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:26:5.24:160,5,0	0/1:8,0:8:3.81:4,0,29	0/0:47,0:18:18.16:0,18,366	0/0:69,0:28:7.48:0,7,541	0/1:18,3:21:99:137,0,267	0/1:22,0:22:29.12:103,0,29	0/1:29,1:30:66.04:216,0,66	0/1:37,0:36:99:333,0,177	0/1:18,2:19:99:117,0,217	0/1:22,0:21:74.66:75,0,144	1/1:19,0:19:3.69:113,4,0	0/0:35,0:35:87.91:0,88,1702	0/1:23,0:23:73.84:74,0,78	0/1:25,0:25:33.42:155,0,33	0/1:23,0:23:63.45:92,0,63	0/1:32,1:32:88.69:89,0,516	0/1:20,0:20:99:101,0,212	0/1:14,0:14:20.92:21,0,30	0/1:17,0:17:79.60:80,0,111	0/1:37,0:37:36.35:187,0,36	0/1:30,0:29:33.38:148,0,33	0/1:23,0:23:23.90:93,0,24	0/0:28,0:28:62.37:0,62,1224	0/0:24,0:24:45.23:0,45,917	0/1:27,0:27:17.44:125,0,17	0/1:39,0:39:99:171,0,195	0/1:23,0:23:24.60:133,0,25	1/1:12,0:11:3.92:81,4,0
chr10	35967102	.	TC	T	982.48	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.621;DP=586;FS=4.606;HRun=3;HaplotypeScore=106.5312;InbreedingCoeff=0.9880;MQ=88.22;MQ0=0;MQRankSum=-2.850;QD=23.96;ReadPosRankSum=-1.100;VQSLOD=2.4786;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,37:41:87.27:1077,87,0	0/0:11,0:11:33.11:0,33,474	0/0:25,0:25:55.28:0,55,683	0/0:30,0:30:77.16:0,77,1113	0/0:21,0:21:57.19:0,57,819	0/0:13,0:13:24.08:0,24,345	0/0:25,0:24:66.05:0,66,856	0/0:28,0:28:75.24:0,75,1057	0/0:31,0:31:57.19:0,57,820	0/0:23,0:22:66.22:0,66,948	0/0:13,0:12:36.12:0,36,517	0/0:22,0:22:57.19:0,57,821	0/0:15,0:14:30.10:0,30,432	0/0:28,0:23:63.09:0,63,836	0/0:19,0:19:42.10:0,42,581	0/0:18,0:18:48.16:0,48,690	0/0:27,0:27:66.18:0,66,926	0/0:25,0:24:66.22:0,66,950	0/0:15,0:13:30.10:0,30,421	0/0:12,0:12:33.11:0,33,475	0/0:42,0:41:99:0,108,1534	0/0:13,0:13:36.12:0,36,517	0/0:11,0:11:33.02:0,33,428	0/0:21,0:21:60.19:0,60,845	0/0:16,0:16:48.12:0,48,667	0/0:19,0:18:54.17:0,54,759	0/0:16,0:15:45.15:0,45,647	0/0:6,0:6:18.06:0,18,259
chr10	35967150	.	CGCCT	C	3993.48	PASS	AB=0.706;AC=23;AF=0.426;AN=54;BaseQRankSum=7.849;DP=486;FS=14.387;HRun=0;HaplotypeScore=86.6707;InbreedingCoeff=0.0046;MQ=46.34;MQ0=83;MQRankSum=-9.330;QD=12.44;ReadPosRankSum=-2.400;VQSLOD=1.4851;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,16:19:33.03:561,33,0	./.	0/1:23,0:3:0.42:2,0,0	0/0:32,0:4:8.87:0,9,58	0/0:20,0:14:21.01:0,21,334	1/1:6,4:8:8.93:74,9,0	0/1:5,14:13:99:262,0,148	0/1:16,8:14:99:143,0,190	0/0:17,0:17:42.08:0,42,840	0/1:13,9:15:61.88:330,0,62	0/1:10,10:12:67.12:215,0,67	0/0:20,0:20:49.38:0,49,1192	1/1:6,5:8:14.99:206,15,0	0/1:12,17:21:99:427,0,123	0/1:3,5:7:70.88:165,0,71	0/0:13,0:13:30.03:0,30,556	0/0:13,0:13:27.05:0,27,531	0/1:7,11:14:58.66:318,0,59	0/1:10,11:13:39.86:406,0,40	0/1:11,5:7:72.48:109,0,72	0/1:14,6:18:72.78:80,0,73	1/1:14,10:13:17.56:242,18,0	0/0:8,0:4:11.91:0,12,271	0/0:33,0:31:62.97:0,63,1709	0/1:8,4:9:99:111,0,154	0/1:8,8:7:67.96:217,0,68	1/1:4,3:6:8.96:127,9,0	0/0:4,0:4:2.99:0,3,86
chr10	35967193	.	C	CA	1217.02	PASS	AB=0.655;AC=19;AF=0.475;AN=40;BaseQRankSum=7.284;DP=225;FS=18.860;HRun=0;HaplotypeScore=33.5703;InbreedingCoeff=0.2383;MQ=44.41;MQ0=11;MQRankSum=-7.513;QD=17.39;ReadPosRankSum=-0.885;VQSLOD=2.8782;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,3:3:9.03:105,9,0	./.	0/0:26,0:2:6.02:0,6,75	./.	./.	./.	./.	1/1:1,4:4:12.04:192,12,0	1/1:2,3:5:6.02:95,6,0	0/1:2,2:4:29.94:105,0,30	0/1:1,3:3:26.65:27,0,36	0/0:22,0:22:51.08:0,51,687	0/1:2,2:2:28.61:29,0,36	0/1:5,8:8:70.51:71,0,72	0/0:3,1:3:3.01:0,3,42	./.	./.	1/1:4,4:7:6.02:96,6,0	1/1:1,3:2:6.02:96,6,0	0/0:2,0:1:3.01:0,3,37	1/1:5,10:14:30.10:472,30,0	1/1:1,1:1:3.01:35,3,0	0/0:6,0:6:9.03:0,9,126	0/0:43,0:40:66.22:0,66,921	0/0:2,0:2:6.02:0,6,84	0/1:2,1:2:35.91:42,0,36	./.	0/0:1,0:1:3.01:0,3,42
chr10	35967224	.	CGCCT	C	284.05	PASS	AB=0.798;AC=6;AF=0.158;AN=38;BaseQRankSum=4.302;DP=293;FS=2.360;HRun=0;HaplotypeScore=38.8046;InbreedingCoeff=0.0198;MQ=41.71;MQ0=40;MQRankSum=-2.915;QD=5.07;ReadPosRankSum=-0.313;VQSLOD=1.3640;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:3,0:3:3.01:0,3,85	0/0:24,0:2:2.84:0,3,30	0/0:25,0:1:3.01:0,3,86	./.	./.	0/0:14,2:6:12.04:0,12,340	0/0:13,0:7:21.05:0,21,457	0/0:6,0:6:3.01:0,3,69	0/1:7,2:5:39.43:39,0,329	./.	0/0:25,0:25:27.05:0,27,771	0/0:9,3:8:2.99:0,3,24	0/0:12,0:6:3.01:0,3,85	./.	0/0:4,0:4:6.02:0,6,136	./.	./.	0/1:6,1:3:45.50:45,0,127	./.	1/1:11,14:16:12.04:218,12,0	0/0:7,1:5:2.89:0,3,29	0/0:13,0:12:19.32:0,19,597	0/0:35,0:32:29.66:0,30,856	./.	0/1:4,3:4:42.49:42,0,225	0/1:6,2:4:48.69:49,0,79	0/0:2,0:2:0:0,0,0
chr10	35967267	.	C	CA	1212.65	PASS	AB=0.853;AC=24;AF=0.522;AN=46;BaseQRankSum=5.560;DP=454;FS=5.389;HRun=0;HaplotypeScore=39.8702;InbreedingCoeff=0.0065;MQ=34.87;MQ0=51;MQRankSum=-5.258;QD=4.95;ReadPosRankSum=2.269;VQSLOD=2.5452;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,6:3:9.03:143,9,0	0/0:5,0:5:3.01:0,3,42	./.	0/1:36,0:2:6.05:6,0,12	./.	./.	0/0:28,2:10:15.05:0,15,209	0/1:23,5:13:99:200,0,278	1/1:0,8:8:6.02:95,6,0	0/1:16,1:6:32.87:33,0,152	1/1:8,1:7:3.01:48,3,0	0/0:29,0:27:23.85:0,24,306	0/1:13,5:11:35.91:42,0,36	./.	1/1:11,6:12:9.03:143,9,0	1/1:1,6:7:6.02:96,6,0	1/1:0,1:1:3.01:48,3,0	0/0:15,4:8:3.01:0,3,42	0/1:8,3:7:77.82:78,0,148	0/1:8,2:6:32.73:33,0,138	0/1:25,11:26:17.59:272,0,18	1/1:11,2:10:3.01:48,3,0	0/0:16,0:14:18.50:0,19,230	0/0:36,1:35:23.83:0,24,314	./.	0/1:9,2:5:32.89:33,0,152	0/1:8,5:6:30.40:42,0,30	0/1:4,0:3:0:0,0,0
chr10	35967298	.	CGCCT	C	352.45	PASS	AB=0.869;AC=11;AF=0.275;AN=40;BaseQRankSum=3.732;DP=445;FS=3.356;HRun=0;HaplotypeScore=29.1147;InbreedingCoeff=0.2735;MQ=26.78;MQ0=132;MQRankSum=-2.441;QD=4.05;ReadPosRankSum=0.772;VQSLOD=1.1255;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:4,7:3:6.02:109,6,0	./.	./.	./.	./.	./.	0/0:15,0:5:6.02:0,6,171	0/0:25,1:2:5.92:0,6,41	0/0:7,0:7:5.95:0,6,103	0/0:20,0:3:6.02:0,6,169	1/1:8,1:4:3.01:54,3,0	0/0:36,0:33:11.84:0,12,323	0/1:13,3:9:48.37:48,0,80	./.	1/1:8,4:8:6.02:109,6,0	0/0:6,0:6:6.02:0,6,158	0/0:1,0:1:3.01:0,3,66	0/0:15,1:6:3.01:0,3,86	0/0:15,0:1:3.01:0,3,85	1/1:10,1:4:3.01:54,3,0	0/0:31,3:19:3.01:0,3,77	0/1:11,1:4:0:0,0,0	0/0:11,0:8:5.95:0,6,108	0/0:47,0:45:23.83:0,24,686	./.	0/1:13,3:4:96.80:97,0,159	0/0:8,1:5:3.01:0,3,86	./.
chr10	35967341	.	C	CA	449.57	PASS	AC=12;AF=0.545;AN=22;BaseQRankSum=4.319;DP=262;FS=0.000;HRun=0;HaplotypeScore=17.3888;InbreedingCoeff=0.5950;MQ=29.89;MQ0=68;MQRankSum=-4.157;QD=13.22;ReadPosRankSum=-0.426;VQSLOD=3.5971;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,7:6:15.05:239,15,0	./.	./.	./.	./.	./.	./.	./.	./.	0/0:8,0:2:3.01:0,3,36	1/1:0,1:1:3.01:33,3,0	0/0:32,0:32:20.79:0,21,293	1/1:1,1:2:3.01:48,3,0	0/0:9,1:3:3.01:0,3,42	1/1:7,4:7:6.02:95,6,0	./.	./.	./.	./.	./.	1/1:7,3:6:6.02:95,6,0	./.	0/0:10,0:6:9.03:0,9,120	0/0:41,0:39:20.60:0,21,293	./.	1/1:1,1:1:3.01:48,3,0	./.	./.
chr10	35967372	.	CGCCT	C	711.97	PASS	AB=0.871;AC=12;AF=0.375;AN=32;BaseQRankSum=2.140;DP=535;FS=5.795;HRun=0;HaplotypeScore=22.6403;InbreedingCoeff=0.3447;MQ=23.51;MQ0=213;MQRankSum=-1.643;QD=5.12;ReadPosRankSum=0.842;VQSLOD=-0.1905;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:5,14:12:9.03:165,9,0	./.	./.	./.	0/0:14,0:8:2.75:0,3,75	./.	./.	./.	0/0:16,0:14:9.03:0,9,239	0/1:30,5:8:99:194,0,235	1/1:6,4:7:6.02:109,6,0	0/0:26,0:24:15.05:0,15,429	./.	0/0:19,5:11:3.01:0,3,85	./.	0/0:8,0:6:6.02:0,6,170	0/0:13,0:8:3.01:0,3,65	1/1:29,5:13:6.02:103,6,0	0/0:11,0:1:3.01:0,3,47	0/1:11,2:9:76.13:100,0,76	0/0:42,0:10:5.81:0,6,97	./.	./.	0/0:43,0:36:8.94:0,9,107	1/1:16,1:3:3.01:54,3,0	./.	./.	1/1:9,2:9:6.02:109,6,0
chr10	35967447	.	CGCCT	C	1949.30	PASS	AB=0.885;AC=17;AF=0.340;AN=50;BaseQRankSum=1.828;DP=1358;FS=14.094;HRun=0;HaplotypeScore=62.8085;InbreedingCoeff=-0.3775;MQ=20.52;MQ0=418;MQRankSum=-1.917;QD=2.35;ReadPosRankSum=3.058;VQSLOD=0.2264;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:66,1:11:3.01:0,3,69	0/1:26,5:13:99:248,0,129	./.	./.	0/1:31,0:21:15.22:15,0,488	0/1:36,6:18:47.34:47,0,79	0/1:77,19:27:36.28:36,0,332	0/0:31,1:1:3.01:0,3,33	0/0:35,0:16:12.04:0,12,280	0/1:72,7:21:99:218,0,578	0/1:25,5:12:22.84:202,0,23	0/0:31,0:21:2.50:0,2,83	./.	0/0:65,5:24:3.01:0,3,77	1/1:60,5:20:6.02:109,6,0	0/0:39,0:13:12.04:0,12,276	0/0:54,0:24:3.01:0,3,35	0/1:72,12:37:93.54:104,0,94	0/1:26,3:9:81.48:81,0,195	0/1:35,14:20:99:424,0,132	0/1:110,16:36:78.76:79,0,509	0/1:42,7:15:96.71:97,0,134	0/0:16,0:4:3.01:0,3,85	0/0:37,0:25:3.01:0,3,85	0/1:49,6:21:99:291,0,257	0/1:45,3:9:82.77:83,0,384	0/0:42,5:12:3.01:0,3,85	1/1:15,1:2:3.01:54,3,0
chr10	35967597	.	ACCTC	A	1966.69	PASS	AB=0.879;AC=17;AF=0.386;AN=44;BaseQRankSum=4.790;DP=767;FS=0.000;HRun=0;HaplotypeScore=46.3987;InbreedingCoeff=0.0863;MQ=27.78;MQ0=98;MQRankSum=2.274;QD=4.95;ReadPosRankSum=3.955;VQSLOD=1.1798;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	1/1:18,1:11:3.01:55,3,0	0/0:24,0:3:9.03:0,9,202	./.	./.	./.	0/1:50,16:54:99:655,0,113	0/0:51,0:18:27.09:0,27,700	0/0:16,0:6:0:0,0,0	0/0:37,3:16:42.14:0,42,1104	./.	0/0:28,0:22:14.90:0,15,216	0/0:21,1:12:2.59:0,3,73	0/1:27,7:20:52.91:258,0,53	0/0:29,4:16:11.77:0,12,205	0/0:11,0:7:3.01:0,3,74	./.	0/1:32,6:23:99:147,0,176	0/1:40,1:17:22.04:22,0,737	1/1:20,2:9:3.01:55,3,0	0/1:41,13:30:54.55:362,0,55	1/1:23,4:16:3.01:55,3,0	0/0:12,0:8:2.96:0,3,19	0/0:41,0:37:63.18:0,63,1503	1/1:20,3:19:9.03:165,9,0	0/1:30,2:18:65.18:65,0,965	0/1:26,2:15:49.17:49,0,73	1/1:9,4:9:12.04:221,12,0
chr10	35967674	.	CTCCG	C	428.16	PASS	AB=0.988;AC=10;AF=0.714;AN=14;BaseQRankSum=1.423;DP=763;FS=4.393;HRun=0;HaplotypeScore=19.7365;MQ=9.83;MQ0=520;MQRankSum=-1.739;QD=1.85;ReadPosRankSum=-0.158;VQSLOD=0.3684;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	0/1:21,0:2:0:0,0,0	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	0/1:38,1:6:0:1,0,0	1/1:40,4:9:2.96:20,3,0	1/1:40,9:12:15.05:268,15,0	./.	./.	1/1:32,6:11:9.03:162,9,0	./.	./.	./.	./.	./.	0/0:42,0:6:3.01:0,3,78	./.	./.	1/1:38,3:7:3.01:54,3,0	./.
chr10	35967749	.	CTCCG	C	141.96	PASS	AC=6;AF=0.75;AN=8;BaseQRankSum=0.720;DP=443;FS=0.000;HRun=0;HaplotypeScore=12.5235;MQ=5.00;MQ0=366;MQRankSum=0.000;QD=1.87;ReadPosRankSum=1.380;VQSLOD=0.7084;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	1/1:22,3:1:3.01:54,3,0	0/0:19,0:2:6.02:0,6,98	./.	./.	1/1:27,8:5:6.02:108,6,0	./.	./.	./.	./.	./.	./.	./.	./.	1/1:15,1:1:3.01:54,3,0	./.
chr10	35968124	.	CTCCG	C	256.43	PASS	AC=10;AF=0.833;AN=12;DP=233;FS=0.000;HRun=0;HaplotypeScore=17.3392;MQ=7.06;MQ0=220;QD=18.32;VQSLOD=2.4648;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	0/0:2,0:2:0:0,0,0	./.	./.	./.	./.	./.	1/1:0,2:2:3.01:54,3,0	./.	./.	./.	./.	./.	./.	./.	./.	1/1:0,4:4:6.49:108,6,0	./.	1/1:1,2:2:3.01:54,3,0	./.	./.	1/1:2,1:2:3.01:54,3,0	./.	./.	1/1:1,1:1:3.01:54,3,0
chr10	35968274	.	CTCCG	C	198.22	PASS	AC=8;AF=1.00;AN=8;DP=215;FS=0.000;HRun=0;HaplotypeScore=15.2478;MQ=7.17;MQ0=200;QD=6.39;VQSLOD=0.5476;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	1/1:0,5:5:0.17:0,0,0	./.	./.	./.	1/1:2,2:1:3.01:54,3,0	./.	./.	./.	./.	./.	./.	1/1:5,5:4:9.03:156,9,0	1/1:5,7:2:3.01:54,3,0	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.
chr10	35970063	.	G	GGAAA	14167.97	PASS	AB=0.525;AC=43;AF=0.768;AN=56;BaseQRankSum=12.836;DP=594;FS=9.171;HRun=0;HaplotypeScore=196.3611;InbreedingCoeff=0.8385;MQ=69.93;MQ0=0;MQRankSum=-14.825;QD=36.05;ReadPosRankSum=0.349;VQSLOD=4.3294;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,99,1652	1/1:0,9:9:3.01:78,3,0	0/0:34,0:27:70.52:0,71,1171	0/0:29,0:25:63.21:0,63,1116	1/1:22,0:22:39.65:541,40,0	1/1:20,0:20:54.07:851,54,0	1/1:18,0:18:48.14:781,48,0	1/1:27,0:27:60.20:1200,60,0	1/1:18,0:18:45.14:713,45,0	1/1:26,0:26:60.18:1104,60,0	1/1:20,0:20:54.03:851,54,0	0/0:36,0:36:96.25:0,96,1601	1/1:17,0:17:51.09:737,51,0	0/1:2,19:21:24.34:73,0,24	1/1:12,0:12:27.09:444,27,0	1/1:20,0:20:45.15:692,45,0	1/1:2,16:18:3.01:39,3,0	1/1:20,0:20:48.08:790,48,0	1/1:24,0:24:54.18:1070,54,0	1/1:12,0:12:33.11:591,33,0	1/1:12,0:12:27.46:332,27,0	1/1:12,0:12:33.11:598,33,0	0/0:17,0:17:51.17:0,51,917	0/0:44,0:44:99:0,120,2038	1/1:22,0:22:45.10:652,45,0	1/1:19,0:19:51.16:840,51,0	1/1:11,0:11:30.97:489,31,0	1/1:13,0:13:39.13:701,39,0
chr10	35970070	.	ATCCATCC	A	1838.99	PASS	AB=0.990;AC=19;AF=0.339;AN=56;BaseQRankSum=12.709;DP=544;FS=0.000;HRun=0;HaplotypeScore=260.2791;InbreedingCoeff=-0.3677;MQ=65.90;MQ0=4;MQRankSum=-11.467;QD=6.62;ReadPosRankSum=7.659;VQSLOD=1.0278;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,108,2491	0/0:9,0:9:3.01:0,3,75	0/0:35,0:24:72.16:0,72,926	0/0:28,0:24:70.78:0,71,1292	1/1:20,1:20:12.26:205,12,0	0/1:18,0:18:99:149,0,134	0/1:17,0:16:48:107,0,48	0/0:19,0:19:51.23:0,51,256	0/1:12,3:15:8.64:319,0,9	0/1:19,0:19:85.45:85,0,111	0/1:17,0:17:31.44:31,0,88	0/0:35,0:35:99:0,105,2736	0/1:16,0:16:6.72:179,0,7	0/0:19,0:19:6.02:0,6,163	0/1:10,0:10:61.54:62,0,136	0/1:15,0:15:35.42:124,0,35	0/0:15,0:15:3.01:0,3,66	0/1:19,0:19:84.84:156,0,85	0/1:19,0:19:72.88:73,0,221	0/1:11,0:11:41.81:42,0,80	0/1:10,0:10:68.32:68,0,78	0/1:12,0:12:43.25:43,0,119	0/0:19,0:19:54.18:0,54,1386	0/0:46,0:46:99:0,138,3645	0/1:19,0:19:87.11:87,0,511	0/1:17,0:17:99:125,0,120	0/1:10,0:10:54.02:54,0,112	0/1:13,0:13:66.46:91,0,66
chr10	35971551	.	TACAC	T	1021.17	PASS	AB=0.860;AC=8;AF=0.160;AN=50;BaseQRankSum=3.130;DP=529;FS=11.372;HRun=0;HaplotypeScore=93.1576;InbreedingCoeff=0.6181;MQ=70.50;MQ0=4;MQRankSum=-0.074;QD=9.20;ReadPosRankSum=1.585;VQSLOD=1.9284;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:28:27.05:0,27,410	./.	./.	./.	1/1:12,1:12:8.82:106,9,0	0/0:17,0:17:13.99:0,14,340	0/0:14,0:13:21.07:0,21,489	0/0:16,0:15:3.47:0,3,26	1/1:13,10:24:18.05:261,18,0	0/0:19,0:19:25.63:0,26,345	0/0:21,0:21:17.87:0,18,382	0/0:19,0:20:27.08:0,27,493	0/0:13,0:13:18.03:0,18,361	0/0:10,0:10:18.06:0,18,314	0/0:16,0:16:21.05:0,21,426	1/1:13,7:20:29.31:426,29,0	0/1:19,8:28:38.25:365,0,38	0/0:17,0:22:39.13:0,39,703	0/0:9,0:9:9.03:0,9,206	0/1:25,1:26:0.28:0,0,501	0/0:16,0:17:23.79:0,24,377	0/0:13,0:13:18.06:0,18,327	0/0:12,0:18:12.04:0,12,203	0/0:21,0:36:38.81:0,39,654	0/0:7,0:8:5.75:0,6,83	0/0:21,0:21:22.30:0,22,298	0/0:21,0:23:38.59:0,39,667	0/0:15,0:15:6.02:0,6,107
chr10	35971650	.	T	TA	16038.57	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-11.713;DP=503;FS=6.864;HRun=1;HaplotypeScore=45.8518;InbreedingCoeff=0.9921;MQ=89.93;MQ0=0;MQRankSum=-4.500;QD=40.30;ReadPosRankSum=2.954;VQSLOD=5.1485;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:63.20:0,63,801	1/1:0,4:4:12.04:180,12,0	0/0:22,0:22:59.36:0,59,791	0/0:20,0:19:52.67:0,53,695	1/1:2,22:24:66.15:955,66,0	1/1:1,20:20:51.17:764,51,0	1/1:1,12:13:33.11:494,33,0	1/1:0,22:22:63.16:862,63,0	1/1:1,20:21:60.20:890,60,0	1/1:1,17:18:51.17:764,51,0	1/1:0,13:13:39.09:559,39,0	0/0:9,0:9:24.08:0,24,311	1/1:0,16:16:48.16:719,48,0	1/1:0,12:12:30.10:449,30,0	1/1:0,22:22:60.20:899,60,0	1/1:0,17:17:48.16:719,48,0	1/1:1,31:32:84.28:1257,84,0	1/1:0,10:10:24.08:359,24,0	1/1:0,16:16:48.14:675,48,0	1/1:0,16:16:45.10:642,45,0	1/1:0,27:27:75.25:1124,75,0	1/1:1,9:10:24.08:360,24,0	0/0:9,0:9:27.09:0,27,347	0/0:21,0:21:60.20:0,60,779	1/1:0,16:16:45.15:674,45,0	1/1:1,27:28:81.27:1209,81,0	1/1:0,26:26:69.23:1034,69,0	1/1:3,11:14:30.10:449,30,0
chr10	35972298	.	G	GGT	2169.78	PASS	AB=0.967;AC=14;AF=0.269;AN=52;BaseQRankSum=2.675;DP=594;FS=0.000;HRun=0;HaplotypeScore=91.9309;InbreedingCoeff=0.5269;MQ=63.02;MQ0=10;MQRankSum=0.732;QD=11.30;ReadPosRankSum=-0.342;VQSLOD=2.8696;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:28:2.18:0,2,57	0/0:10,0:10:24.07:0,24,268	./.	./.	1/1:20,0:20:39.10:432,39,0	1/1:12,13:26:27.09:410,27,0	1/1:19,16:37:3.90:499,4,0	0/0:34,0:34:17.25:0,17,167	1/1:15,0:15:33.09:366,33,0	0/0:27,0:27:20.17:0,20,220	0/0:18,0:18:24.05:0,24,258	0/0:13,0:13:14.64:0,15,157	0/0:8,0:9:20.87:0,21,203	0/0:14,0:14:21.06:0,21,235	0/0:20,0:21:38.78:0,39,398	0/1:20,0:21:14.65:262,0,15	1/1:23,0:23:19.27:264,19,0	0/0:22,0:22:7.20:0,7,234	0/1:8,0:7:18.66:19,0,58	0/0:22,0:24:20.86:0,21,196	0/0:30,0:33:44.42:0,44,406	0/0:10,0:11:14.86:0,15,140	0/0:19,0:19:27.06:0,27,291	0/0:25,0:30:42.03:0,42,604	0/0:15,0:16:32.91:0,33,340	0/0:26,0:26:30.07:0,30,326	0/1:20,2:22:55.12:55,0,228	0/1:18,1:18:37.27:37,0,258
chr10	35972313	.	G	GTA	2426.84	PASS	AB=0.891;AC=10;AF=0.179;AN=56;BaseQRankSum=-1.273;DP=629;FS=0.998;HRun=0;HaplotypeScore=80.3462;InbreedingCoeff=0.6176;MQ=55.34;MQ0=13;MQRankSum=3.496;QD=14.11;ReadPosRankSum=7.405;VQSLOD=3.2661;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:31:43.80:0,44,303	0/0:10,0:10:30.07:0,30,413	0/0:23,0:10:26.99:0,27,256	0/0:26,0:12:32.67:0,33,274	1/1:2,22:24:39.13:740,39,0	0/1:30,0:29:99:123,0,246	0/1:45,0:45:99:137,0,454	0/0:36,0:36:86.37:0,86,956	1/1:0,17:17:33.11:634,33,0	0/0:29,0:29:85.77:0,86,869	0/0:23,0:23:54.02:0,54,606	0/0:12,0:12:27.03:0,27,322	0/0:12,0:11:30.03:0,30,364	0/0:12,0:12:30.04:0,30,389	0/0:21,0:21:60.07:0,60,736	0/1:5,17:22:1.41:491,0,1	1/1:1,17:18:24.04:459,24,0	0/0:18,0:18:29.37:0,29,513	0/0:10,0:9:18.85:0,19,217	0/0:27,0:27:71.93:0,72,706	0/0:41,0:40:99:0,111,1123	0/0:11,0:11:30:0,30,324	0/0:16,0:16:45.06:0,45,554	0/0:31,0:31:78.06:0,78,979	0/0:21,0:21:53.88:0,54,645	0/0:26,0:26:77.64:0,78,844	0/1:16,0:16:0.38:0,0,410	0/0:20,0:19:27.11:0,27,526
chr10	35972440	.	C	CTT	10137.57	PASS	AB=0.575;AC=43;AF=0.768;AN=56;BaseQRankSum=-4.705;DP=662;FS=9.337;HRun=11;HaplotypeScore=82.7165;InbreedingCoeff=0.6175;MQ=69.48;MQ0=8;MQRankSum=0.911;QD=21.94;ReadPosRankSum=0.659;VQSLOD=3.6767;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:10,1:27:54.77:55,0,76	1/1:0,6:7:17.55:226,18,0	0/0:69,0:28:27.33:0,27,247	0/0:66,0:29:4.72:0,5,140	0/1:5,0:22:63.48:90,0,63	1/1:1,12:16:35.09:452,35,0	1/1:2,9:12:23.56:298,24,0	1/1:10,16:29:30.15:691,30,0	1/1:3,0:18:29.94:103,30,0	1/1:3,25:30:77.73:1070,78,0	1/1:8,11:23:40.01:489,40,0	0/0:22,0:22:57.08:0,57,553	1/1:2,14:17:35.61:479,36,0	1/1:1,21:23:47.65:660,48,0	1/1:1,11:14:32.08:408,32,0	0/1:4,0:21:19.70:73,0,20	1/1:4,1:32:26.76:185,27,0	1/1:4,13:18:10.07:491,10,0	1/1:5,11:16:3.47:345,3,0	1/1:7,35:44:99:1495,114,0	1/1:2,1:3:5.51:52,6,0	1/1:3,10:15:32.60:443,33,0	0/0:25,0:25:39.09:0,39,535	0/0:17,0:17:42.06:0,42,407	1/1:3,14:17:27.09:391,27,0	1/1:2,18:22:53.64:723,54,0	1/1:3,17:21:42.14:608,42,0	1/1:2,9:12:23.57:313,24,0
chr10	35973096	.	ACTGATATTATCCCCAGCTGTATGCTCCG	A	6895.75	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-2.054;DP=667;FS=2.614;HRun=0;HaplotypeScore=444.3353;InbreedingCoeff=0.9381;MQ=75.69;MQ0=2;MQRankSum=-1.442;QD=14.07;ReadPosRankSum=4.345;VQSLOD=1.9028;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:98.93:0,99,4754	1/1:7,0:7:5.99:50,6,0	0/0:28,0:24:8.13:0,8,97	0/0:35,0:31:31.57:0,32,245	1/1:8,14:22:20.66:155,21,0	1/1:16,0:16:23.77:173,24,0	1/1:18,0:19:29.99:306,30,0	1/1:44,0:39:39.04:362,39,0	1/1:22,0:22:35.71:357,36,0	1/1:26,0:26:51.02:524,51,0	1/1:13,4:17:23.73:196,24,0	0/0:29,0:29:66:0,66,3453	1/1:26,0:26:32.40:269,32,0	1/1:20,0:20:32.14:313,32,0	1/1:30,0:30:53.82:577,54,0	1/1:23,0:23:56.68:539,57,0	1/1:17,0:17:20.94:274,21,0	1/1:7,0:7:8.92:64,9,0	1/1:16,0:15:9.01:82,9,0	1/1:21,0:21:29.87:296,30,0	1/1:60,0:59:74.24:702,74,0	1/1:19,0:19:32.61:315,33,0	0/0:21,0:21:41.96:0,42,1896	0/0:17,0:17:38.97:0,39,1598	1/1:14,0:14:29.80:230,30,0	1/1:11,15:26:44.77:563,45,0	1/1:23,0:23:35.85:354,36,0	1/1:15,0:15:23.95:193,24,0
chr10	35975057	.	AAAACAAAC	A	15419.61	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=11.963;DP=705;FS=6.021;HRun=0;HaplotypeScore=185.3933;InbreedingCoeff=0.9563;MQ=56.17;MQ0=6;MQRankSum=-12.213;QD=37.79;ReadPosRankSum=1.276;VQSLOD=4.0120;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:34:65.99:0,66,641	1/1:1,11:12:27.09:685,27,0	0/0:43,0:30:24.06:0,24,663	0/0:42,0:28:27.08:0,27,726	0/0:34,0:34:66.23:0,66,2566	1/1:9,11:20:30.10:761,30,0	1/1:11,12:24:27.09:665,27,0	1/1:15,8:23:23.52:461,24,0	0/0:17,0:18:39.12:0,39,1514	1/1:10,22:32:69.20:1610,69,0	1/1:3,15:18:45.15:1067,45,0	0/0:24,0:24:45.15:0,45,1758	1/1:7,15:22:36.12:913,36,0	1/1:11,13:24:36.12:913,36,0	1/1:14,20:34:48.16:1217,48,0	0/0:18,0:18:30.10:0,30,1216	0/0:39,0:39:81.28:0,81,3046	1/1:12,6:18:17.33:435,17,0	1/1:12,13:25:39.08:837,39,0	1/1:9,12:21:33.11:837,33,0	1/1:12,8:20:0.01:71,0,0	1/1:10,18:29:51.13:1216,51,0	0/0:13,0:13:27.09:0,27,1044	0/0:32,0:32:75.26:0,75,2985	1/1:7,15:22:30.10:761,30,0	1/1:11,21:33:63.22:1532,63,0	1/1:4,16:20:42.14:1058,42,0	1/1:3,7:10:15.05:380,15,0
chr10	35975470	.	GGGGTGTGTGT	G	3666.19	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=9.852;DP=572;FS=4.044;HRun=0;HaplotypeScore=159.0856;InbreedingCoeff=-0.1127;MQ=73.68;MQ0=16;MQRankSum=-5.054;QD=9.88;ReadPosRankSum=1.339;VQSLOD=2.2251;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:23:69.31:356,0,69	0/1:13,0:13:99:149,0,214	0/0:32,0:24:58.09:0,58,567	0/0:30,0:22:49.01:0,49,521	1/1:21,7:28:59.69:483,60,0	0/1:27,0:26:99:106,0,281	0/1:24,0:23:11.68:12,0,310	0/0:15,0:15:41.70:0,42,353	1/1:0,11:12:9.03:271,9,0	0/1:24,0:21:37.69:38,0,363	0/0:18,0:18:24.76:0,25,255	0/0:19,0:18:47.14:0,47,762	0/1:18,0:17:99:231,0,200	0/1:9,0:9:58.91:124,0,59	0/1:24,0:24:99:342,0,306	1/1:0,12:13:14.83:396,15,0	1/1:0,18:19:9.03:283,9,0	0/1:12,0:11:4.76:5,0,214	0/1:18,0:18:61.94:62,0,300	0/1:13,0:13:99:243,0,127	0/0:40,0:40:91.48:0,91,775	0/1:24,0:23:21.37:21,0,339	0/0:15,0:13:35.99:0,36,440	0/0:26,0:26:41.91:0,42,645	0/1:22,0:22:99:246,0,177	0/1:23,0:22:62.03:62,0,368	0/1:24,0:23:99:236,0,297	0/0:6,0:5:14.98:0,15,126
chr10	35975472	.	GGTGTGTGTGT	G	4202.89	PASS	AB=0.758;AC=37;AF=0.771;AN=48;BaseQRankSum=4.857;DP=586;FS=6.496;HRun=0;HaplotypeScore=160.9670;InbreedingCoeff=0.5077;MQ=69.79;MQ0=20;MQRankSum=-3.099;QD=11.24;ReadPosRankSum=0.512;VQSLOD=2.1515;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:30:18.06:0,18,608	1/1:10,2:13:9.03:246,9,0	./.	./.	1/1:27,0:27:2.95:19,3,0	1/1:15,9:24:8.13:204,8,0	1/1:19,8:25:3.01:77,3,0	0/0:17,0:17:2.44:0,2,5	1/1:14,0:14:9.03:227,9,0	1/1:19,6:22:2.63:150,3,0	1/1:13,6:19:2.99:24,3,0	0/0:16,0:17:20.66:0,21,438	1/1:11,4:16:15.05:364,15,0	1/1:3,5:8:6.02:177,6,0	1/1:17,3:25:21.07:543,21,0	1/1:13,0:13:11.80:322,12,0	1/1:21,0:20:9:236,9,0	1/1:12,0:11:3.01:65,3,0	1/1:15,3:18:4.23:152,4,0	1/1:8,6:14:12.04:353,12,0	./.	1/1:20,4:23:3.01:88,3,0	0/0:16,0:14:6.02:0,6,146	0/0:16,0:27:14.64:0,15,325	0/1:17,7:25:16.74:364,0,17	1/1:18,5:21:12:191,12,0	1/1:21,1:23:18.06:401,18,0	./.
chr10	35976022	.	G	GA	1075.20	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-7.321;DP=646;FS=6.945;HRun=6;HaplotypeScore=60.6505;InbreedingCoeff=0.9900;MQ=73.25;MQ0=0;MQRankSum=-0.512;QD=29.06;ReadPosRankSum=4.232;VQSLOD=4.2571;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,35:37:93.30:1170,93,0	0/0:8,0:8:24.05:0,24,245	0/0:14,0:15:29.05:0,29,270	0/0:17,0:16:18.81:0,19,276	0/0:32,0:32:90.20:0,90,918	0/0:15,0:15:36.08:0,36,367	0/0:18,0:18:45.10:0,45,458	0/0:30,0:30:78.14:0,78,783	0/0:22,0:22:60.13:0,60,612	0/0:26,0:26:57.12:0,57,577	0/0:31,0:31:84.18:0,84,856	0/0:22,0:22:63.14:0,63,643	0/0:20,0:20:57.12:0,57,575	0/0:20,0:20:60.14:0,60,612	0/0:39,0:39:99:0,111,1133	0/0:27,0:27:72.16:0,72,734	0/0:33,0:33:93.19:0,93,941	0/0:19,0:19:51.11:0,51,520	0/0:12,0:12:36.08:0,36,367	0/0:30,0:30:87.20:0,87,887	0/0:24,0:24:69.16:0,69,704	0/0:18,0:18:51.12:0,51,520	0/0:25,0:25:66.13:0,66,666	0/0:13,0:13:33.07:0,33,336	0/0:12,0:12:36.08:0,36,367	0/0:35,0:35:99:0,99,1010	0/0:33,0:33:90.20:0,90,918	0/0:13,0:13:39.09:0,39,398
chr10	35978212	.	CT	C	485.26	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=5.057;DP=483;FS=2.766;HRun=8;HaplotypeScore=49.6192;InbreedingCoeff=0.7120;MQ=74.18;MQ0=1;MQRankSum=-2.423;QD=12.77;ReadPosRankSum=0.384;VQSLOD=2.6405;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,21:22:60.10:579,60,0	0/0:10,0:10:30.09:0,30,362	0/1:16,0:15:4:4,0,275	0/0:16,0:16:36.11:0,36,432	0/0:14,0:14:42.12:0,42,496	0/0:15,0:15:42.13:0,42,507	0/0:16,0:16:42.10:0,42,493	0/0:22,1:23:25.66:0,26,588	0/0:14,0:14:39.12:0,39,467	0/0:24,0:24:66.20:0,66,789	0/0:12,0:12:33.10:0,33,398	0/0:11,0:11:33.09:0,33,388	0/0:16,0:16:45.13:0,45,532	0/0:16,0:16:42.13:0,42,507	0/0:14,0:14:42.13:0,42,507	0/0:10,0:10:27.08:0,27,326	0/0:30,0:30:84.24:0,84,1001	0/0:33,0:33:96.26:0,96,1134	0/0:22,0:22:60.13:0,60,670	0/0:15,0:15:39.12:0,39,471	0/0:5,0:5:15.03:0,15,169	0/0:14,0:14:42.09:0,42,491	0/0:12,0:12:33.10:0,33,399	0/0:20,0:20:54.17:0,54,652	0/0:17,0:16:35.90:0,36,411	0/0:21,0:21:60.18:0,60,720	0/0:30,0:30:87.25:0,87,1031	0/0:15,0:15:39.12:0,39,471
chr10	35978966	.	GGTGT	G	2013.45	PASS	AB=0.797;AC=34;AF=0.654;AN=52;BaseQRankSum=1.029;DP=627;FS=0.000;HRun=0;HaplotypeScore=113.5977;InbreedingCoeff=0.5659;MQ=73.50;MQ0=15;MQRankSum=-0.065;QD=5.75;ReadPosRankSum=2.136;VQSLOD=1.5608;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:27:13.99:0,14,84	1/1:4,3:8:6.01:75,6,0	./.	./.	0/0:27,0:27:3.17:0,3,24	1/1:13,0:14:9.01:93,9,0	1/1:20,0:20:5.98:57,6,0	1/1:30,0:30:0.51:32,1,0	0/0:9,0:13:5.74:0,6,67	1/1:16,11:27:24.07:348,24,0	0/1:15,4:20:3.72:77,0,4	0/0:19,0:19:11.97:0,12,237	1/1:8,2:10:6.02:94,6,0	1/1:15,1:16:6.01:75,6,0	1/1:14,8:23:21.06:309,21,0	0/0:15,0:17:9.03:0,9,156	0/0:23,0:32:18.03:0,18,263	1/1:13,4:18:9.02:122,9,0	1/1:11,1:11:2.35:114,2,0	1/1:14,2:16:11.73:164,12,0	1/1:34,1:35:3.01:47,3,0	1/1:18,5:22:5.81:67,6,0	0/0:18,0:19:2.67:0,3,129	0/0:33,0:37:55.87:0,56,982	1/1:13,6:18:6.02:94,6,0	1/1:18,6:24:12.50:147,13,0	0/1:17,5:23:1.39:129,0,1	1/1:6,5:11:9.03:141,9,0
chr10	35980571	.	ACTCTCTCTCTCTCT	A	6637.46	PASS	AB=0.670;AC=29;AF=0.558;AN=52;BaseQRankSum=5.024;DP=642;FS=3.527;HRun=0;HaplotypeScore=266.4011;InbreedingCoeff=0.7408;MQ=77.56;MQ0=7;MQRankSum=-6.391;QD=20.11;ReadPosRankSum=2.122;VQSLOD=3.1582;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:19:9.03:0,9,325	1/1:2,5:7:6.77:239,7,0	0/0:32,0:23:18.06:0,18,646	0/0:62,0:48:36.84:0,37,1317	0/0:16,0:20:33.11:0,33,2033	./.	0/1:13,7:21:99:335,0,173	1/1:33,0:33:18.04:318,18,0	0/0:21,0:23:26.93:0,27,1535	1/1:9,16:26:54.15:1808,54,0	0/1:3,8:11:0:0,0,0	0/0:17,0:18:36.12:0,36,2149	1/1:7,9:17:12.04:454,12,0	1/1:7,14:21:3.01:119,3,0	1/1:8,21:31:3:101,3,0	0/0:20,0:27:45.15:0,45,2511	0/0:20,0:31:69.21:0,69,3846	1/1:15,2:17:11.67:280,12,0	1/1:14,11:25:32.84:1085,33,0	1/1:5,9:14:3.48:103,3,0	1/1:30,3:32:11.99:149,12,0	0/1:7,5:12:0:0,0,0	0/0:18,0:18:30.10:0,30,1910	0/0:23,0:24:42.14:0,42,2680	./.	1/1:8,10:19:12.16:718,12,0	1/1:16,12:28:15.05:572,15,0	1/1:5,10:15:9.03:356,9,0
chr10	35980648	.	A	ATG	3872.41	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-2.651;DP=971;FS=2.576;HRun=0;HaplotypeScore=201.0042;InbreedingCoeff=0.9996;MQ=50.88;MQ0=25;MQRankSum=1.686;QD=31.48;ReadPosRankSum=5.280;VQSLOD=4.5395;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:54.17:0,54,694	0/0:11,0:11:27.06:0,27,334	0/0:39,0:25:44.91:0,45,516	0/0:30,0:17:38.95:0,39,447	1/1:10,15:25:39.11:663,39,0	0/0:20,0:20:39.09:0,39,476	0/0:22,0:22:44.82:0,45,583	0/0:88,0:67:85.73:0,86,1512	1/1:9,18:26:54.18:899,54,0	0/0:60,0:53:99:0,132,1631	0/0:24,0:23:45.13:0,45,571	0/0:27,0:27:72.22:0,72,915	0/0:30,0:30:63.19:0,63,804	0/0:27,0:26:51.17:0,51,662	0/0:39,0:39:63.20:0,63,818	1/1:10,33:40:78.26:1306,78,0	1/1:8,20:28:60.20:1004,60,0	0/0:26,0:26:56.97:0,57,728	0/0:36,0:26:54.12:0,54,650	0/0:30,0:30:66.20:0,66,844	0/0:71,0:66:99:0,114,1533	0/0:30,0:29:63.20:0,63,819	0/0:27,0:27:72.20:0,72,902	0/0:48,0:48:99:0,114,1463	0/0:30,0:30:57.04:0,57,712	0/0:44,0:42:99:0,111,1422	0/0:36,0:36:84.21:0,84,1050	0/0:27,0:27:63.20:0,63,813
chr10	35980683	.	TTGTGTATA	T	721.32	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=8.318;DP=1083;FS=3.734;HRun=0;HaplotypeScore=306.7326;InbreedingCoeff=0.9840;MQ=53.24;MQ0=18;MQRankSum=0.946;QD=5.91;ReadPosRankSum=-1.320;VQSLOD=1.9755;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:26:55.98:0,56,2067	0/0:13,0:13:36.11:0,36,1167	0/0:80,0:33:22.04:0,22,671	0/0:60,0:27:44.49:0,44,1033	1/1:9,15:24:11.74:93,12,0	0/0:22,0:22:45.09:0,45,1499	0/0:20,0:20:33.09:0,33,866	0/0:65,0:62:90.04:0,90,1598	1/1:15,12:27:17.97:215,18,0	0/0:54,0:54:99:0,114,4044	0/0:21,0:21:51.13:0,51,1624	0/0:38,0:38:80.61:0,81,2893	0/0:28,0:28:45.14:0,45,1529	0/0:36,0:35:75.18:0,75,2371	0/0:46,0:46:99:0,102,3376	1/1:18,22:40:26.85:277,27,0	1/1:18,13:31:16.66:292,17,0	0/0:27,0:27:45.08:0,45,1500	0/0:46,0:37:61.78:0,62,2047	0/0:32,0:32:81.20:0,81,2386	0/0:101,0:101:99:0,190,7019	0/0:30,0:30:54.14:0,54,1791	0/0:22,0:22:48.06:0,48,1334	0/0:57,0:57:99:0,123,4050	0/0:28,0:28:69.20:0,69,2324	0/0:43,0:42:96.27:0,96,2975	0/0:38,0:38:96.29:0,96,3420	0/0:27,0:27:66.17:0,66,2338
chr10	35980769	.	A	ATGTGTG	5824.92	PASS	AB=0.645;AC=38;AF=0.731;AN=52;BaseQRankSum=1.689;DP=902;FS=3.438;HRun=0;HaplotypeScore=175.2421;InbreedingCoeff=0.6307;MQ=50.44;MQ0=18;MQRankSum=1.097;QD=8.47;ReadPosRankSum=-1.396;VQSLOD=3.5104;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:45,0:44:26.29:581,26,0	./.	0/0:24,0:9:3.01:0,3,37	./.	0/0:21,0:21:21.05:0,21,374	1/1:16,0:15:14.94:219,15,0	1/1:33,0:34:33.96:711,34,0	1/1:59,0:41:28.44:283,28,0	0/0:21,0:20:27.07:0,27,495	1/1:29,1:29:29.49:535,29,0	1/1:12,3:19:3.01:38,3,0	1/1:28,0:45:21.07:269,21,0	1/1:15,11:29:8.85:65,9,0	1/1:16,19:39:3.93:41,4,0	1/1:18,10:32:2.23:37,2,0	0/0:25,0:27:43.47:0,43,813	0/0:43,0:45:92.25:0,92,1679	1/1:21,0:22:16.87:444,17,0	1/1:26,1:21:28.36:279,28,0	0/1:13,10:25:0:0,0,0	1/1:64,2:94:14.47:377,14,0	0/0:14,6:22:0.35:0,0,1	1/1:9,1:23:12.04:187,12,0	0/1:15,0:46:71.09:696,0,71	1/1:14,7:22:6.02:136,6,0	1/1:36,0:33:35.92:552,36,0	1/1:14,9:26:12.02:331,12,0	1/1:10,0:10:3.48:45,3,0
chr10	35982145	.	GCA	G	2115.56	PASS	AB=0.785;AC=26;AF=0.500;AN=52;BaseQRankSum=0.243;DP=611;FS=2.794;HRun=0;HaplotypeScore=86.2380;InbreedingCoeff=0.1794;MQ=63.46;MQ0=14;MQRankSum=-0.239;QD=6.11;ReadPosRankSum=0.955;VQSLOD=2.6481;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:2.74:0,3,12	1/1:6,3:8:2.57:33,3,0	./.	./.	0/0:14,0:26:16.08:0,16,133	1/1:8,11:20:17.88:178,18,0	0/1:18,5:28:57.51:188,0,58	0/0:18,0:16:1.82:0,2,5	0/0:15,0:28:8.23:0,8,122	0/1:13,1:17:24.99:51,0,25	1/1:6,3:10:8.86:80,9,0	0/0:14,0:14:9.03:0,9,135	1/1:10,8:19:11.86:111,12,0	0/1:7,5:12:0.22:169,0,0	1/1:13,10:25:29.75:291,30,0	0/0:8,0:23:27.01:0,27,252	0/0:20,0:32:25.82:0,26,234	0/0:18,0:18:13.82:0,14,154	1/1:13,1:15:5.84:47,6,0	1/1:9,6:16:23.73:226,24,0	0/1:39,4:41:72.30:151,0,72	0/1:6,6:12:5.32:96,0,5	0/1:20,0:21:19.02:19,0,204	0/1:23,2:25:26.77:27,0,445	0/1:9,6:17:2.24:139,0,2	1/1:14,5:20:23.42:202,23,0	0/1:10,7:19:20.10:196,0,20	0/1:12,4:16:74.87:84,0,75
chr10	35982319	.	A	ATCTG	6291.76	PASS	AB=1.000;AC=26;AF=0.464;AN=56;BaseQRankSum=-0.984;DP=666;FS=8.215;HRun=0;HaplotypeScore=156.2386;InbreedingCoeff=0.3345;MQ=68.92;MQ0=10;MQRankSum=-0.525;QD=15.20;ReadPosRankSum=3.855;VQSLOD=3.6705;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:19:14.70:0,15,181	0/1:18,0:18:99:148,0,134	0/0:28,0:23:3.04:0,3,273	0/0:18,0:15:30.04:0,30,296	0/0:30,0:30:71.99:0,72,708	0/1:21,0:21:25.56:220,0,26	1/1:14,0:14:25.91:228,26,0	1/1:50,0:50:99:822,104,0	0/0:27,0:26:35.90:0,36,333	0/1:30,0:30:99:302,0,103	1/1:23,0:23:13.66:373,14,0	0/0:21,0:20:48.05:0,48,579	0/1:29,0:29:99:131,0,213	0/1:21,0:21:29.96:182,0,30	0/1:21,0:21:81.19:129,0,81	0/0:22,0:22:47.47:0,47,464	0/0:22,0:22:34.20:0,34,377	0/0:20,0:19:8.33:0,8,163	1/1:15,1:13:33.78:361,34,0	1/1:17,8:25:51.51:790,52,0	1/1:20,2:22:44.68:514,45,0	0/1:15,0:15:31.92:165,0,32	0/0:24,0:23:57.03:0,57,637	0/0:19,0:18:30.03:0,30,377	0/1:23,0:23:49.21:295,0,49	1/1:35,0:35:2.34:542,2,0	1/1:29,3:32:71.92:842,72,0	1/1:19,0:19:2.66:249,3,0
chr10	35982331	.	GTCTA	G	1750.43	PASS	AB=0.989;AC=20;AF=0.385;AN=52;BaseQRankSum=-8.184;DP=638;FS=1.099;HRun=0;HaplotypeScore=169.5877;InbreedingCoeff=0.0304;MQ=57.41;MQ0=17;MQRankSum=2.565;QD=4.78;ReadPosRankSum=-4.494;VQSLOD=1.5073;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:17:11.85:0,12,119	0/1:19,0:19:11.86:12,0,393	./.	./.	1/1:23,7:30:44:529,44,0	0/1:21,0:21:42.94:43,0,189	0/1:16,0:16:60.86:61,0,80	0/0:52,0:44:0:0,0,0	1/1:12,11:22:12.04:186,12,0	0/0:29,0:29:20.79:0,21,555	0/0:22,0:22:6.02:0,6,98	0/1:21,1:20:13.52:14,0,509	0/0:28,0:28:13.09:0,13,661	0/0:17,0:17:15.05:0,15,246	0/0:20,0:20:10.57:0,11,429	1/1:19,5:24:45.03:560,45,0	1/1:15,4:19:27.01:325,27,0	0/0:18,0:17:27.49:0,27,393	0/1:19,0:16:29.96:30,0,96	0/1:24,0:24:6.86:7,0,308	0/0:20,0:19:12.02:0,12,123	0/1:16,0:16:28.22:28,0,176	0/1:25,1:25:4.53:5,0,612	0/0:17,0:16:24.03:0,24,426	0/1:22,0:22:3.91:4,0,248	0/1:36,0:36:44.35:44,0,269	0/1:30,0:29:28.71:29,0,211	0/1:18,1:18:40.81:41,0,202
chr10	35982390	.	CATCT	C	7126.63	PASS	AB=0.959;AC=38;AF=0.760;AN=50;BaseQRankSum=6.886;DP=646;FS=1.114;HRun=0;HaplotypeScore=140.7408;InbreedingCoeff=0.7237;MQ=59.05;MQ0=14;MQRankSum=0.485;QD=15.07;ReadPosRankSum=-3.294;VQSLOD=4.2606;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:5:0.28:0,0,0	./.	./.	./.	1/1:12,14:27:39.05:542,39,0	1/1:8,19:28:26.98:367,27,0	1/1:8,13:21:18.05:281,18,0	1/1:32,0:31:20.97:182,21,0	0/1:20,1:20:7.82:8,0,720	1/1:9,8:17:24.05:329,24,0	1/1:6,9:15:17.85:281,18,0	0/0:26,0:24:39.12:0,39,855	1/1:15,17:32:29.19:467,29,0	1/1:7,19:26:45.15:695,45,0	1/1:8,19:28:48.16:732,48,0	0/0:10,0:25:16.87:0,17,267	0/0:17,0:17:24.05:0,24,517	1/1:21,5:24:24.98:381,25,0	1/1:11,6:17:19.67:228,20,0	1/1:11,16:27:36.01:499,36,0	1/1:8,10:16:9.03:141,9,0	1/1:5,9:14:15.05:235,15,0	0/1:26,1:26:13.85:14,0,627	0/0:26,0:25:48:0,48,839	1/1:7,10:18:24.01:347,24,0	1/1:13,12:25:36.08:503,36,0	1/1:13,22:35:47.93:676,48,0	1/1:8,10:18:11.45:219,11,0
chr10	35983502	.	TC	T	847.83	PASS	AB=0.981;AC=7;AF=0.125;AN=56;BaseQRankSum=4.294;DP=417;FS=7.813;HRun=1;HaplotypeScore=46.3544;InbreedingCoeff=0.4574;MQ=65.26;MQ0=5;MQRankSum=-2.423;QD=9.86;ReadPosRankSum=-3.247;VQSLOD=-0.3454;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,19:22:53.63:664,54,0	0/0:7,0:7:21.06:0,21,270	0/0:22,0:12:31.91:0,32,335	0/0:10,0:5:8.57:0,9,70	1/1:17,2:19:4.01:200,4,0	0/0:10,0:10:30.10:0,30,407	0/0:15,0:15:33.09:0,33,441	0/0:23,0:23:68.49:0,68,820	0/1:17,0:17:40.97:41,0,47	0/0:21,0:21:63.17:0,63,803	0/0:9,0:9:27.09:0,27,367	0/0:10,0:10:30.09:0,30,392	0/0:10,0:10:27.08:0,27,352	0/0:10,0:10:27.09:0,27,367	0/0:13,0:13:39.12:0,39,514	0/1:11,0:11:8.98:59,0,9	0/1:16,1:16:17.29:17,0,32	0/0:16,0:16:33.08:0,33,420	0/0:13,0:13:39.09:0,39,487	0/0:26,0:26:75.22:0,75,980	0/0:7,0:7:18.03:0,18,226	0/0:15,0:15:45.10:0,45,561	0/0:11,0:11:33.11:0,33,449	0/0:15,0:14:39.11:0,39,506	0/0:14,0:14:42.13:0,42,555	0/0:17,0:17:51.16:0,51,682	0/0:25,0:24:66.19:0,66,880	0/0:12,0:12:33.08:0,33,425
chr10	35984528	.	CTGGG	C	497.59	PASS	AB=0.957;AC=14;AF=0.269;AN=52;BaseQRankSum=4.517;DP=401;FS=12.941;HRun=0;HaplotypeScore=59.9955;InbreedingCoeff=-0.1284;MQ=36.14;MQ0=133;MQRankSum=-7.033;QD=2.37;ReadPosRankSum=-0.499;VQSLOD=-0.2277;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:8:19.31:0,19,330	0/1:4,1:5:45.53:58,0,46	./.	./.	0/0:5,0:4:12.03:0,12,189	0/1:16,0:14:63.75:64,0,349	0/0:24,0:7:7.17:0,7,187	1/1:18,0:3:1.01:35,1,0	0/0:11,0:7:21.07:0,21,382	0/1:9,0:6:42.91:43,0,158	0/0:7,0:4:6.02:0,6,109	0/0:13,0:8:24.08:0,24,458	0/0:11,0:5:12.04:0,12,226	0/0:14,1:9:13.23:0,13,239	0/0:18,0:14:39.81:0,40,650	0/0:13,0:9:24.06:0,24,365	0/0:26,0:14:30.08:0,30,526	0/1:31,1:19:91.10:91,0,555	0/1:22,0:12:91.90:92,0,401	1/1:3,1:3:3.48:54,3,0	0/1:50,1:22:14.83:15,0,610	0/1:13,2:12:31.27:31,0,251	0/0:6,0:3:6.02:0,6,109	0/0:18,0:9:21.07:0,21,365	0/1:8,0:5:44.80:45,0,146	0/1:16,1:9:87.09:87,0,269	0/0:6,0:3:9.03:0,9,157	0/1:12,0:9:30.82:31,0,303
chr10	35984536	.	CTGGG	C	593.46	PASS	AB=0.943;AC=14;AF=0.269;AN=52;BaseQRankSum=5.133;DP=393;FS=8.279;HRun=0;HaplotypeScore=57.5049;InbreedingCoeff=-0.2723;MQ=33.41;MQ0=144;MQRankSum=-6.709;QD=3.12;ReadPosRankSum=-2.159;VQSLOD=-0.7561;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:7:14.08:0,14,224	0/1:2,1:3:45.53:83,0,46	./.	./.	0/0:6,0:4:9.03:0,9,158	0/1:18,0:14:63.51:64,0,259	0/1:25,1:5:44.18:44,0,103	0/0:13,0:2:4.44:0,4,13	0/0:11,0:6:18.06:0,18,322	0/1:7,0:4:45.57:49,0,46	0/0:6,1:4:6.02:0,6,102	0/0:14,0:9:27.09:0,27,520	0/1:10,1:5:12.10:12,0,158	0/1:11,1:6:64.28:64,0,97	0/0:18,0:13:0.12:0,0,452	0/0:10,0:5:15.05:0,15,277	0/0:24,0:11:30.10:0,30,552	0/1:29,1:17:40.35:40,0,600	0/1:23,1:12:97.73:98,0,338	1/1:6,0:3:6.02:99,6,0	0/0:47,0:19:15.06:0,15,449	0/1:15,1:11:34.82:35,0,177	0/0:7,0:3:6.02:0,6,108	0/0:21,0:11:23.87:0,24,407	0/1:9,0:5:14.53:15,0,68	0/1:19,0:8:92.57:93,0,170	0/0:8,0:3:2.46:0,2,47	0/1:8,1:6:44.75:45,0,131
chr10	35984544	.	CTGGG	C	929.88	PASS	AB=0.910;AC=18;AF=0.360;AN=50;BaseQRankSum=3.555;DP=398;FS=5.227;HRun=0;HaplotypeScore=55.1362;InbreedingCoeff=-0.3214;MQ=31.28;MQ0=155;MQRankSum=-5.644;QD=3.69;ReadPosRankSum=-0.297;VQSLOD=1.0362;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:6:17.09:0,17,257	0/1:3,0:3:28:28,0,49	./.	./.	0/0:6,0:4:3.01:0,3,59	0/1:14,3:11:99:105,0,255	0/1:29,1:7:89.30:89,0,112	./.	0/0:13,0:7:18.06:0,18,338	0/1:4,1:2:45.55:52,0,46	0/0:6,0:3:3.01:0,3,55	0/0:15,0:10:30.09:0,30,551	0/1:9,1:3:15.11:15,0,114	0/1:12,3:7:90.66:104,0,91	0/1:13,3:10:34.09:34,0,311	0/0:10,0:5:15.05:0,15,279	0/0:28,0:13:27.09:0,27,497	0/1:27,1:15:15.42:15,0,610	0/1:21,0:11:99:190,0,150	1/1:4,2:3:6.02:105,6,0	0/1:44,2:17:32.71:33,0,141	0/1:14,0:9:37.73:38,0,129	0/0:8,0:4:9.03:0,9,167	0/0:24,0:13:29.13:0,29,488	0/1:7,3:5:45.45:107,0,45	0/1:18,1:7:85.94:86,0,92	1/1:5,1:1:3.01:58,3,0	0/1:5,1:3:20.90:21,0,100
chr10	35984552	.	CTGGG	C	290.45	PASS	AB=0.947;AC=9;AF=0.173;AN=52;BaseQRankSum=1.820;DP=418;FS=2.159;HRun=0;HaplotypeScore=59.4558;InbreedingCoeff=-0.0769;MQ=31.31;MQ0=159;MQRankSum=-5.097;QD=1.95;ReadPosRankSum=2.420;VQSLOD=1.4272;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:7:19.31:0,19,349	0/0:4,0:3:9.03:0,9,137	./.	./.	0/0:5,0:4:3.01:0,3,60	0/1:19,1:12:91.16:91,0,299	0/1:31,1:7:7.81:8,0,92	0/0:23,1:2:5.70:0,6,29	0/0:12,0:6:18.05:0,18,309	0/0:9,0:5:14.26:0,14,214	0/0:6,0:3:3.01:0,3,55	0/0:13,0:9:27.09:0,27,520	0/1:12,1:6:9.08:9,0,212	0/0:15,0:6:8.56:0,9,146	0/1:16,0:9:36.32:36,0,261	0/0:9,0:4:12.04:0,12,224	0/0:27,0:12:27.09:0,27,506	0/0:27,1:14:4.84:0,5,457	0/1:22,2:11:99:150,0,230	1/1:5,1:3:3.01:52,3,0	0/0:42,0:17:8.98:0,9,340	0/1:14,1:10:34.20:34,0,163	0/0:7,0:4:6.02:0,6,113	0/0:23,0:12:30.10:0,30,562	0/0:12,0:5:7.60:0,8,68	0/1:21,2:8:37.69:38,0,221	0/0:6,0:1:1.55:0,2,4	0/0:7,0:4:12.04:0,12,191
chr10	35986218	.	C	CTCTCTG	1968.14	PASS	AC=6;AF=0.111;AN=54;BaseQRankSum=-3.001;DP=681;FS=12.456;HRun=0;HaplotypeScore=148.6383;InbreedingCoeff=0.9279;MQ=63.60;MQ0=4;MQRankSum=-7.403;QD=22.89;ReadPosRankSum=-1.651;VQSLOD=2.3057;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:38:60.09:0,60,1191	0/0:4,0:4:6.02:0,6,130	0/0:14,0:10:21:0,21,302	0/0:20,0:14:27.09:0,27,517	./.	0/0:21,0:20:54.19:0,54,1141	0/0:35,0:34:84.15:0,84,1570	0/0:38,0:37:72.24:0,72,1237	1/1:2,26:28:27.09:874,27,0	0/0:21,0:21:30.94:0,31,765	0/0:16,0:16:9.03:0,9,159	0/0:19,0:19:39.12:0,39,795	0/0:24,0:24:69.24:0,69,1484	0/0:31,0:30:81.28:0,81,1635	0/0:21,0:20:51.16:0,51,1017	1/1:8,30:39:30.08:928,30,0	1/1:2,17:17:12.04:304,12,0	0/0:18,0:18:47.83:0,48,876	0/0:35,0:35:45.14:0,45,797	0/0:19,0:19:36.12:0,36,714	0/0:45,0:44:72.25:0,72,1446	0/0:19,0:19:48.16:0,48,997	0/0:13,0:13:18.05:0,18,303	0/0:51,0:51:99:0,111,2198	0/0:21,0:21:39.06:0,39,759	0/0:22,0:22:54.17:0,54,979	0/0:18,0:17:48.16:0,48,993	0/0:13,0:13:39.13:0,39,843
chr10	35986268	.	CTCTGTCTCTGTCTG	C	3423.31	PASS	AB=0.895;AC=11;AF=0.212;AN=52;BaseQRankSum=2.061;DP=680;FS=1.173;HRun=0;HaplotypeScore=237.2259;InbreedingCoeff=-0.2780;MQ=45.65;MQ0=29;MQRankSum=-4.369;QD=11.53;ReadPosRankSum=1.433;VQSLOD=2.5239;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:34:24.87:0,25,280	0/0:3,3:6:6.19:0,6,139	./.	./.	0/0:15,0:14:27.09:0,27,761	0/1:24,4:27:99:147,0,1012	0/0:30,0:27:16.07:0,16,321	0/0:31,0:23:59.91:0,60,687	0/0:27,0:27:36.21:0,36,952	0/1:13,13:25:99:788,0,448	0/1:11,2:13:98.86:99,0,300	0/0:21,0:21:57.20:0,57,1906	0/1:21,6:25:72.53:73,0,1099	0/0:16,9:25:27.09:0,27,632	0/0:25,2:24:27.07:0,27,626	0/0:22,0:22:36.07:0,36,998	0/0:17,0:16:19.06:0,19,573	0/1:24,0:24:99:398,0,784	0/1:17,6:13:99:317,0,272	0/0:11,12:22:16.87:0,17,415	0/1:53,0:49:78.12:78,0,1113	0/0:14,9:21:14.37:0,14,269	0/0:6,0:6:18.06:0,18,656	0/0:49,0:49:99:0,108,3616	0/1:21,0:18:81.65:82,0,267	0/1:38,1:34:99:747,0,1113	0/1:24,5:26:99:634,0,966	0/1:14,0:13:61.38:61,0,608
chr10	35986274	.	C	CTCTG	171.41	PASS	AB=0.949;AC=13;AF=0.241;AN=54;BaseQRankSum=7.701;DP=669;FS=0.000;HRun=0;HaplotypeScore=158.9862;InbreedingCoeff=-0.1483;MQ=44.84;MQ0=28;MQRankSum=-2.832;QD=0.54;ReadPosRankSum=-1.620;VQSLOD=2.5087;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:16,20:35:4.26:77,4,0	0/0:5,0:5:3.01:0,3,50	0/0:9,0:1:3.01:0,3,49	./.	0/0:17,0:15:27.09:0,27,451	0/1:25,0:26:1.80:2,0,265	0/0:27,0:24:8.31:0,8,145	0/1:36,0:30:5.86:6,0,507	0/0:25,0:25:20.72:0,21,349	0/1:27,0:24:51.58:52,0,210	0/1:15,0:16:14.98:15,0,102	0/0:21,0:21:48.16:0,48,790	0/0:25,0:23:6.60:0,7,343	0/0:20,0:20:15.04:0,15,220	0/1:26,0:25:7.50:7,0,154	0/0:21,0:21:24.07:0,24,359	0/0:17,0:16:19.30:0,19,271	0/1:23,0:24:6.99:7,0,288	0/1:17,0:13:14.25:14,0,60	0/0:22,0:21:13.99:0,14,195	0/0:56,0:52:32.56:0,33,578	0/0:19,0:18:6.02:0,6,95	0/0:7,0:7:18.06:0,18,296	0/0:42,0:42:87.30:0,87,1432	0/1:19,0:18:0.73:1,0,60	0/1:36,0:34:13.83:14,0,589	0/1:29,0:29:99:99,0,348	0/1:12,0:13:11.68:12,0,225
chr10	35986322	.	GTC	G	503.11	PASS	AB=0.707;AC=7;AF=0.125;AN=56;BaseQRankSum=8.330;DP=787;FS=8.041;HRun=0;HaplotypeScore=157.5594;InbreedingCoeff=0.6786;MQ=60.34;MQ0=32;MQRankSum=-0.660;QD=6.37;ReadPosRankSum=-2.190;VQSLOD=2.1646;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,1:30:2.32:0,2,311	0/0:6,0:6:8.71:0,9,164	0/0:81,0:26:55.33:0,55,865	0/0:93,0:50:61.16:0,61,1279	0/1:17,12:28:40.95:179,0,41	0/0:19,0:19:26.70:0,27,468	0/0:25,0:23:45.13:0,45,818	0/0:45,0:42:51.72:0,52,1725	1/1:2,12:14:20.97:195,21,0	0/0:27,0:25:70.19:0,70,1117	0/0:28,0:28:32.52:0,33,923	0/0:17,0:17:51.17:0,51,934	0/0:21,0:19:3.13:0,3,587	0/0:29,0:29:57.18:0,57,1006	0/0:24,0:21:32.41:0,32,603	1/1:13,10:23:30.96:234,31,0	1/1:5,8:13:5.37:35,5,0	0/0:15,0:15:15.92:0,16,520	0/0:17,0:14:21.21:0,21,575	0/0:30,0:30:49.90:0,50,909	0/0:42,0:38:16.83:0,17,672	0/0:13,0:13:21:0,21,385	0/0:22,0:21:63.20:0,63,1069	0/0:39,0:39:99:0,101,1794	0/0:14,0:12:21.07:0,21,378	0/0:33,0:33:54.70:0,55,1226	0/0:27,0:25:40.86:0,41,875	0/0:10,0:10:24.08:0,24,439
chr10	35986333	.	TCTGA	T	1024.65	PASS	AB=0.788;AC=7;AF=0.125;AN=56;BaseQRankSum=8.860;DP=821;FS=1.132;HRun=0;HaplotypeScore=181.5315;InbreedingCoeff=0.5282;MQ=65.39;MQ0=26;MQRankSum=-1.014;QD=8.99;ReadPosRankSum=-2.204;VQSLOD=2.2057;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:34,0:34:99:117,0,241	0/0:7,0:7:11.58:0,12,295	0/0:97,0:37:42.59:0,43,1218	0/0:108,0:64:84.26:0,84,1667	1/1:20,10:29:17.04:406,17,0	0/0:19,0:19:32.91:0,33,834	0/0:24,0:22:47.84:0,48,1265	0/0:39,0:39:99:0,105,2369	1/1:6,10:16:20.96:263,21,0	0/0:28,0:27:76.95:0,77,1765	0/0:30,0:30:68.64:0,69,1567	0/0:18,0:18:54.19:0,54,1343	0/0:19,0:17:39.12:0,39,915	0/0:29,0:29:65.87:0,66,1566	0/0:23,0:20:35.96:0,36,965	0/1:14,8:22:10.61:319,0,11	0/1:5,6:12:11.81:62,0,12	0/0:18,0:18:33.30:0,33,868	0/0:16,0:14:42.12:0,42,884	0/0:28,0:28:60.04:0,60,1442	0/0:37,0:34:48.14:0,48,1095	0/0:16,0:16:32.62:0,33,668	0/0:22,0:21:60.19:0,60,1483	0/0:38,0:38:70.45:0,70,2375	0/0:16,0:14:28.04:0,28,678	0/0:29,0:29:75.99:0,76,1950	0/0:31,0:29:51.60:0,52,1381	0/0:14,0:14:36.12:0,36,905
chr10	35986483	.	G	GT	1140.99	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=0.554;DP=546;FS=0.689;HRun=1;HaplotypeScore=54.6447;InbreedingCoeff=0.8690;MQ=73.64;MQ0=0;MQRankSum=-1.735;QD=32.60;ReadPosRankSum=0.842;VQSLOD=3.2643;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,35:35:84.28:1236,84,0	0/0:9,0:9:27.09:0,27,350	0/0:16,0:16:23.58:0,24,381	0/0:7,0:8:4.47:0,4,122	0/0:27,0:27:75.21:0,75,939	0/0:17,0:17:48.14:0,48,606	0/0:19,0:19:57.12:0,57,701	0/0:21,0:21:60.15:0,60,736	0/0:21,0:21:60.04:0,60,716	0/0:27,0:27:81.21:0,81,985	0/0:24,0:24:69.17:0,69,837	0/0:17,0:17:51.15:0,51,646	0/0:16,0:16:42.12:0,42,528	0/0:13,0:13:39.07:0,39,484	0/0:18,0:18:54.05:0,54,642	0/0:14,0:14:42.12:0,42,524	0/0:19,0:19:57.07:0,57,681	0/0:18,0:18:54.12:0,54,664	0/0:15,0:15:45.12:0,45,548	0/0:24,0:24:71.99:0,72,867	0/0:10,0:10:27.07:0,27,323	0/0:30,0:30:77.21:0,77,1055	0/0:13,0:13:39.09:0,39,462	0/0:27,0:27:75.10:0,75,888	0/0:24,0:24:72.21:0,72,916	0/0:29,0:29:87.23:0,87,1084	0/0:28,0:28:81.20:0,81,1012	0/0:7,0:7:18.06:0,18,233
chr10	35986579	.	AGAGAGAGAGGGG	A	1216.81	PASS	AB=0.979;AC=18;AF=0.360;AN=50;BaseQRankSum=-0.041;DP=614;FS=1.273;HRun=0;HaplotypeScore=161.9196;InbreedingCoeff=-0.0620;MQ=55.87;MQ0=25;MQRankSum=-0.519;QD=3.67;ReadPosRankSum=-3.418;VQSLOD=1.9813;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:34,0:33:65.35:283,0,65	0/1:8,0:11:48.26:48,0,70	0/0:17,0:5:4.24:0,4,125	0/0:33,0:11:11.77:0,12,83	1/1:3,31:34:3.01:36,3,0	0/1:26,0:26:44.26:44,0,79	0/1:16,0:14:41.08:61,0,41	1/1:25,0:23:0.59:153,1,0	1/1:22,0:22:7.79:68,8,0	0/1:20,0:19:37.26:37,0,125	0/0:18,0:16:3.01:0,3,53	0/0:19,0:19:48.16:0,48,1953	0/0:16,0:14:8.23:0,8,95	0/0:19,0:18:5.08:0,5,45	0/1:26,0:25:4.69:5,0,71	./.	1/1:26,0:24:43.74:461,44,0	0/0:20,0:20:3.01:0,3,32	0/1:12,0:12:36.49:36,0,147	0/0:30,0:30:14.99:0,15,140	./.	./.	0/0:22,0:22:39.65:0,40,1536	0/0:26,0:24:45.63:0,46,1481	0/1:24,0:23:58.44:58,0,64	0/1:24,0:24:66.63:67,0,293	0/1:32,0:32:9.11:9,0,185	0/0:13,0:8:1.83:0,2,30
chr10	35986581	.	AGAGAGAGGGG	A	2284.70	PASS	AB=0.977;AC=19;AF=0.380;AN=50;BaseQRankSum=0.826;DP=622;FS=24.662;HRun=0;HaplotypeScore=150.0762;InbreedingCoeff=0.1184;MQ=59.38;MQ0=25;MQRankSum=-1.515;QD=6.90;ReadPosRankSum=-1.358;VQSLOD=0.8529;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:34,0:33:50.39:597,50,0	0/1:11,0:11:24.16:118,0,24	0/0:23,0:8:0.51:0,1,137	0/0:32,0:11:15.90:0,16,95	1/1:34,0:34:3.01:36,3,0	0/1:26,0:26:32.02:83,0,32	0/1:16,0:16:1.25:105,0,1	1/1:25,0:23:18.10:196,18,0	1/1:21,1:22:9.03:164,9,0	0/1:18,0:17:45.63:63,0,46	0/0:17,0:15:3.01:0,3,35	0/0:21,0:21:54.18:0,54,1841	0/0:18,0:16:8.32:0,8,40	0/0:20,0:19:2.67:0,3,11	0/1:27,0:26:4.57:5,0,35	./.	1/1:24,0:22:52.36:662,52,0	0/0:20,0:20:2.37:0,2,8	0/1:12,0:12:84.37:84,0,97	0/0:31,0:31:17.95:0,18,134	./.	./.	0/0:22,0:22:35.93:0,36,1373	0/0:26,0:24:45.63:0,46,1335	0/1:24,0:23:26.90:27,0,35	0/1:22,0:24:74.70:224,0,75	0/1:31,0:32:52.86:77,0,53	0/0:13,0:8:1.05:0,1,5
chr10	35986583	.	AGAGAGG	A	5114.84	PASS	AB=0.865;AC=39;AF=0.722;AN=54;BaseQRankSum=4.664;DP=618;FS=1.744;HRun=0;HaplotypeScore=117.3620;InbreedingCoeff=0.2402;MQ=59.16;MQ0=24;MQRankSum=-4.485;QD=9.91;ReadPosRankSum=0.180;VQSLOD=3.1305;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:34,0:33:10.50:223,0,10	1/1:8,2:10:17.04:278,17,0	0/1:25,0:8:17.22:17,0,26	0/1:35,0:12:7.77:8,0,35	0/1:34,0:34:11.96:12,0,19	1/1:4,22:26:8.56:247,9,0	1/1:5,13:16:17.99:286,18,0	1/1:4,21:23:57.16:436,57,0	1/1:1,0:21:9.03:108,9,0	1/1:16,2:17:22.84:437,23,0	0/1:4,13:15:5.96:32,0,6	0/0:22,0:22:60.09:0,60,1330	1/1:5,12:15:1.54:103,2,0	1/1:1,18:18:8.52:161,9,0	1/1:3,23:25:11.93:179,12,0	./.	0/1:24,0:22:47.90:178,0,48	0/1:1,19:20:14.96:67,0,15	1/1:0,12:12:34.10:320,34,0	1/1:3,26:29:11.87:101,12,0	0/0:3,18:18:2.97:0,3,20	1/1:0,14:14:2.95:19,3,0	0/0:21,0:21:11.91:0,12,998	0/0:26,0:24:28.60:0,29,904	1/1:3,21:23:7.99:224,8,0	1/1:18,5:23:67.59:974,68,0	1/1:5,27:32:34.09:634,34,0	1/1:6,6:7:1.77:71,2,0
chr10	35988455	.	A	ACATG	7663.38	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-11.890;DP=765;FS=0.000;HRun=0;HaplotypeScore=116.2288;InbreedingCoeff=0.9999;MQ=63.88;MQ0=1;MQRankSum=-0.626;QD=47.90;ReadPosRankSum=6.284;VQSLOD=5.1960;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,36:46:69:1804,69,0	0/0:12,0:12:36.11:0,36,631	0/0:25,0:20:39.59:0,40,663	0/0:34,0:31:72.20:0,72,1391	1/1:2,21:23:48.16:1257,48,0	0/0:18,0:18:54.10:0,54,877	0/0:26,0:26:72.20:0,72,1221	0/0:37,0:37:99:0,99,1725	1/1:2,32:36:72.25:1892,72,0	0/0:34,0:34:93.32:0,93,1730	0/0:23,0:23:69.24:0,69,1270	0/0:33,0:33:96.32:0,96,1732	0/0:24,0:24:66.17:0,66,1113	0/0:26,0:26:78.23:0,78,1348	0/0:24,0:24:66.17:0,66,1092	1/1:3,18:22:42.14:1111,42,0	1/1:5,28:33:60.21:1599,60,0	0/0:30,0:30:87.30:0,87,1621	0/0:16,0:16:48.16:0,48,878	0/0:21,0:21:60.19:0,60,1081	0/0:23,0:23:66.21:0,66,1191	0/0:25,0:25:66.20:0,66,1141	0/0:28,0:28:78.26:0,78,1425	0/0:30,0:30:78.25:0,78,1414	0/0:26,0:26:75.26:0,75,1356	0/0:39,0:39:99:0,114,2083	0/0:35,0:34:99:0,102,1763	0/0:16,0:16:39.11:0,39,694
chr10	35989137	.	CT	C	1205.90	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.465;DP=650;FS=13.665;HRun=1;HaplotypeScore=72.4790;InbreedingCoeff=0.9998;MQ=78.90;MQ0=0;MQRankSum=-4.276;QD=35.47;ReadPosRankSum=0.930;VQSLOD=2.5195;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,34:34:93.31:1301,93,0	0/0:13,0:13:39.12:0,39,601	0/0:19,0:19:53.18:0,53,786	0/0:23,0:22:53.98:0,54,880	0/0:25,0:25:72.25:0,72,1151	0/0:18,0:18:54.17:0,54,840	0/0:17,0:17:51.15:0,51,770	0/0:35,0:35:99:0,105,1658	0/0:30,0:30:90.31:0,90,1438	0/0:21,0:21:63.21:0,63,985	0/0:15,0:15:42.14:0,42,672	0/0:30,0:30:90.30:0,90,1416	0/0:16,0:16:48.16:0,48,763	0/0:16,0:16:48.12:0,48,717	0/0:26,0:26:78.27:0,78,1243	0/0:35,0:35:99:0,105,1652	0/0:27,0:27:81.25:0,81,1243	0/0:13,0:13:39.13:0,39,621	0/0:15,0:15:45.15:0,45,719	0/0:27,0:27:81.26:0,81,1251	0/0:40,0:40:99:0,120,1919	0/0:22,0:22:66.23:0,66,1053	0/0:24,0:24:72.23:0,72,1128	0/0:19,0:18:57.19:0,57,908	0/0:24,0:24:72.24:0,72,1129	0/0:30,0:30:90.31:0,90,1440	0/0:20,0:20:60.20:0,60,949	0/0:16,0:16:48.16:0,48,767
chr10	35989322	.	A	AAC	5903.37	PASS	AB=0.530;AC=9;AF=0.161;AN=56;BaseQRankSum=-13.591;DP=956;FS=11.043;HRun=0;HaplotypeScore=111.1188;InbreedingCoeff=0.8732;MQ=71.17;MQ0=4;MQRankSum=-1.068;QD=30.59;ReadPosRankSum=5.403;VQSLOD=6.5410;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,46:56:80.20:1834,80,0	0/0:10,0:10:24.07:0,24,289	0/0:61,1:44:10.23:0,10,704	0/0:67,0:48:39.03:0,39,742	1/1:5,26:31:63.21:1016,63,0	0/0:26,0:26:63.17:0,63,763	0/0:40,0:40:81.20:0,81,982	0/0:36,0:36:84.25:0,84,1020	1/1:3,28:31:69.24:1139,69,0	0/0:36,0:37:78.05:0,78,924	0/0:20,0:21:53.99:0,54,638	0/0:20,0:20:48.14:0,48,587	0/0:26,0:26:75.22:0,75,922	0/0:20,0:20:54.16:0,54,664	0/0:37,0:37:93.27:0,93,1136	0/1:4,30:35:8.84:924,0,9	1/1:2,35:39:60.21:990,60,0	0/0:26,0:26:56.52:0,57,727	0/0:28,0:27:51.15:0,51,616	0/0:43,0:44:99:0,114,1376	0/0:63,0:63:99:0,147,1813	0/0:30,0:30:78.18:0,78,924	0/0:22,0:24:63:0,63,736	0/0:43,0:43:99:0,111,1358	0/0:24,0:24:66.21:0,66,825	0/0:33,0:33:87.23:0,87,1032	0/0:25,0:24:66.21:0,66,826	0/0:18,0:18:48.15:0,48,598
chr10	35989850	.	A	AT	1319.77	PASS	AB=0.840;AC=14;AF=0.250;AN=56;BaseQRankSum=-2.760;DP=546;FS=7.136;HRun=14;HaplotypeScore=55.7663;InbreedingCoeff=0.3584;MQ=63.81;MQ0=0;MQRankSum=-0.026;QD=5.69;ReadPosRankSum=0.694;VQSLOD=1.8860;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,1:42:48.33:243,48,0	0/1:10,1:12:3.68:4,0,97	0/0:6,0:7:12.55:0,13,62	0/0:8,0:4:2.94:0,3,19	0/1:14,13:29:7.53:236,0,8	0/1:15,5:20:37.63:38,0,170	0/0:14,0:15:11.58:0,12,139	0/0:20,0:20:32.45:0,32,211	1/1:5,17:23:35.83:304,36,0	0/0:27,0:27:46.95:0,47,305	0/0:13,0:15:18.16:0,18,105	0/1:24,1:27:24.08:24,0,83	0/0:22,0:22:14.21:0,14,95	0/0:10,0:10:14.68:0,15,95	0/0:18,0:18:7.35:0,7,151	1/1:3,18:21:38.92:329,39,0	1/1:3,15:19:26.84:225,27,0	0/0:18,0:18:29.30:0,29,189	0/1:17,4:22:60.22:60,0,106	0/1:14,3:17:29.12:29,0,137	0/0:14,1:15:0.20:0,0,127	0/0:16,0:16:23.48:0,23,153	0/0:22,2:24:32.74:0,33,338	0/0:20,0:21:43.19:0,43,273	0/0:16,0:18:4.83:0,5,136	0/0:25,0:27:60.14:0,60,377	0/0:17,0:18:34.41:0,34,214	0/0:12,2:14:5.71:0,6,154
chr10	35991152	.	CATTTATTTATTT	C	1287	PASS	AB=0.800;AC=25;AF=0.893;AN=28;BaseQRankSum=0.857;DP=285;FS=0.000;HRun=0;HaplotypeScore=92.7167;InbreedingCoeff=0.0562;MQ=61.42;MQ0=4;MQRankSum=-1.085;QD=7.85;ReadPosRankSum=0.057;VQSLOD=1.6389;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:31:3.01:55,3,0	1/1:9,0:9:3.01:102,3,0	./.	./.	1/1:4,0:6:0.63:80,1,0	1/1:13,6:19:12.04:407,12,0	./.	0/0:32,0:27:0:0,0,0	1/1:8,0:9:3.01:84,3,0	./.	./.	./.	./.	./.	./.	1/1:4,0:6:3.01:84,3,0	1/1:21,0:22:5.81:97,6,0	1/1:16,2:18:6.02:203,6,0	1/1:8,1:8:3.01:46,3,0	./.	./.	./.	1/1:3,0:4:1.55:4,2,0	./.	1/1:7,1:8:3.01:102,3,0	0/1:9,0:12:3.40:3,0,35	1/1:10,1:11:3.01:102,3,0	./.
chr10	35993205	.	CTGGAG	C	2258.13	PASS	AC=8;AF=0.148;AN=54;BaseQRankSum=5.473;DP=287;FS=13.463;HRun=0;HaplotypeScore=60.0308;InbreedingCoeff=0.8445;MQ=76.70;MQ0=0;MQRankSum=-2.927;QD=49.09;ReadPosRankSum=2.522;VQSLOD=2.9363;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:57.20:0,57,1785	0/0:7,0:7:21.07:0,21,679	0/0:11,0:11:30.57:0,31,786	0/0:11,0:11:30.10:0,30,869	1/1:1,15:16:36.12:801,36,0	0/0:16,0:16:48.16:0,48,1472	0/0:5,0:5:15.05:0,15,485	0/0:33,0:33:93.32:0,93,2892	1/1:0,2:2:6.02:134,6,0	0/0:11,0:11:33.11:0,33,1032	0/0:11,0:11:30.09:0,30,891	0/0:3,0:3:9.03:0,9,262	0/0:4,0:4:12.04:0,12,388	0/0:1,0:1:3.01:0,3,97	0/0:2,0:2:6.02:0,6,194	1/1:0,8:8:12.04:268,12,0	1/1:0,20:20:54.19:1204,54,0	0/0:12,0:12:33.09:0,33,957	0/0:12,0:12:36.11:0,36,1093	0/0:6,0:6:15.05:0,15,485	0/0:5,0:5:12.04:0,12,388	./.	0/0:6,0:6:18.04:0,18,509	0/0:6,0:6:18.06:0,18,582	0/0:16,0:16:48.16:0,48,1509	0/0:11,0:11:33.11:0,33,1048	0/0:21,0:20:63.20:0,63,1896	0/0:12,0:12:36.12:0,36,1163
chr10	35994344	.	CTTT	C	4579.91	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=11.194;DP=543;FS=2.312;HRun=10;HaplotypeScore=80.6614;InbreedingCoeff=0.9977;MQ=65.59;MQ0=0;MQRankSum=-2.451;QD=32.03;ReadPosRankSum=4.581;VQSLOD=4.3105;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,39:41:93.28:1265,93,0	0/0:10,0:10:27.09:0,27,559	0/0:13,0:13:18.97:0,19,507	0/0:14,0:12:33.11:0,33,672	1/1:3,25:28:72.21:982,72,0	0/0:16,0:16:48.14:0,48,923	0/0:23,0:23:60.21:0,60,1225	0/0:33,0:35:81.24:0,81,1594	1/1:0,21:21:51.17:695,51,0	0/0:18,0:18:51.17:0,51,998	0/0:16,0:16:48.16:0,48,981	0/0:16,0:16:33.11:0,33,684	0/0:11,0:12:36.10:0,36,698	0/0:13,0:13:36.11:0,36,676	0/0:15,0:15:45.15:0,45,920	1/1:4,20:24:54.16:737,54,0	1/1:1,28:29:66.08:901,66,0	0/0:16,0:16:45.15:0,45,893	0/0:15,0:15:39.13:0,39,794	0/0:26,0:26:75.24:0,75,1489	0/0:22,0:23:57.16:0,57,1090	0/0:20,0:20:51.12:0,51,973	0/0:21,0:21:57.18:0,57,1142	0/0:18,0:19:48.16:0,48,977	0/0:7,0:9:27.05:0,27,482	0/0:22,0:22:57.18:0,57,1095	0/0:14,0:14:36.12:0,36,745	0/0:13,0:14:36.05:0,36,619
chr10	35995166	.	G	GATC	6046.94	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-10.341;DP=725;FS=2.422;HRun=0;HaplotypeScore=100.2452;InbreedingCoeff=0.9999;MQ=88.41;MQ0=0;MQRankSum=-4.196;QD=53.04;ReadPosRankSum=1.679;VQSLOD=7.1328;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,117,1945	0/0:13,0:13:39.11:0,39,617	0/0:31,0:31:53.49:0,53,955	0/0:26,0:26:60.16:0,60,883	1/1:4,25:29:51.18:1154,51,0	0/0:15,0:15:42.13:0,42,675	0/0:31,0:31:90.31:0,90,1499	0/0:26,0:26:78.26:0,78,1274	1/1:2,18:21:57.19:1248,57,0	0/0:29,0:29:87.29:0,87,1428	0/0:23,0:23:66.19:0,66,1071	0/0:26,0:26:75.26:0,75,1245	0/0:20,0:20:54.18:0,54,887	0/0:23,0:23:66.18:0,66,1064	0/0:30,0:30:87.28:0,87,1419	1/1:4,24:28:69.24:1539,69,0	1/1:3,32:36:93.32:2106,93,0	0/0:20,0:20:57.19:0,57,945	0/0:23,0:23:63.18:0,63,993	0/0:20,0:20:57.19:0,57,949	0/0:33,0:33:90.29:0,90,1463	0/0:27,0:27:75.26:0,75,1244	0/0:31,0:31:90.31:0,90,1499	0/0:37,0:37:99:0,111,1795	0/0:18,0:18:54.18:0,54,891	0/0:28,0:28:84.28:0,84,1372	0/0:27,0:27:65.73:0,66,1095	0/0:12,0:12:36.12:0,36,600
chr10	35996484	.	CTT	C	1700.34	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=7.285;DP=510;FS=21.628;HRun=12;HaplotypeScore=64.6116;InbreedingCoeff=0.9107;MQ=70.13;MQ0=2;MQRankSum=-0.469;QD=18.89;ReadPosRankSum=2.541;VQSLOD=0.9361;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:29:50.80:0,51,227	0/0:7,0:7:15.05:0,15,223	0/1:11,0:9:1.05:1,0,72	0/0:13,0:12:23.51:0,24,299	1/1:2,22:24:60.10:609,60,0	0/0:14,0:16:29.48:0,29,454	0/0:12,0:12:33.10:0,33,474	0/0:29,0:31:75.68:0,76,1032	1/1:0,14:14:33.08:336,33,0	0/0:32,0:33:74.71:0,75,1028	0/0:11,0:13:29.58:0,30,395	0/0:13,0:13:36.12:0,36,537	0/0:16,0:18:53.15:0,53,733	0/0:8,0:8:21.07:0,21,313	0/0:14,0:14:35.99:0,36,461	1/1:1,13:15:19.66:365,20,0	1/1:3,22:24:54.09:549,54,0	0/0:20,0:21:53.65:0,54,725	0/0:21,0:23:50.63:0,51,668	0/0:18,0:20:53.64:0,54,705	0/0:9,0:10:27.05:0,27,377	0/0:10,0:11:26.54:0,27,342	0/0:18,0:18:42.11:0,42,586	0/0:5,0:5:15.04:0,15,191	0/0:21,0:21:54.16:0,54,738	0/0:29,0:29:78.23:0,78,1087	0/0:33,0:34:93.31:0,93,1370	0/0:19,0:21:59.69:0,60,859
chr10	35996983	.	G	GGA	3440.87	PASS	AB=0.981;AC=48;AF=0.889;AN=54;BaseQRankSum=-2.425;DP=364;FS=26.948;HRun=0;HaplotypeScore=332.5184;InbreedingCoeff=0.1034;MQ=35.84;MQ0=2;MQRankSum=-1.277;QD=9.58;ReadPosRankSum=-0.678;VQSLOD=2.2872;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,0:7:3.11:8,3,0	1/1:5,0:5:6.48:62,6,0	./.	0/0:4,0:2:3.01:0,3,37	0/1:15,0:15:6.50:6,0,12	1/1:20,1:20:24.08:286,24,0	1/1:15,0:15:14.30:137,14,0	1/1:22,0:22:13.55:276,14,0	1/1:13,0:12:3.78:21,4,0	1/1:21,0:21:26.94:281,27,0	1/1:11,0:11:5.62:24,6,0	1/1:14,0:14:13.10:96,13,0	1/1:11,2:13:13.68:135,14,0	0/1:14,0:13:13.16:89,0,13	1/1:22,0:22:6.48:124,6,0	1/1:12,0:12:12.52:87,13,0	1/1:8,0:8:0.84:34,1,0	1/1:3,1:4:9.50:124,9,0	1/1:15,0:13:13.98:101,14,0	1/1:17,0:17:3.08:248,3,0	1/1:6,0:6:1.51:47,2,0	1/1:11,1:12:18.53:170,19,0	1/1:14,0:14:8.05:43,8,0	0/1:8,0:8:7.52:8,0,13	1/1:10,0:10:17.55:218,18,0	0/1:22,2:24:5.47:260,0,5	1/1:21,0:21:19.57:209,20,0	1/1:14,1:15:27.16:348,27,0
chr10	35997012	.	A	ATT	757.15	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=4.529;DP=406;FS=0.000;HRun=0;HaplotypeScore=165.4458;InbreedingCoeff=0.8399;MQ=69.73;MQ0=5;MQRankSum=-5.183;QD=11.83;ReadPosRankSum=-6.453;VQSLOD=2.1522;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:10,0:10:6.12:46,6,0	0/0:7,0:7:15.04:0,15,177	0/0:23,0:18:35.66:0,36,383	0/0:24,0:11:29.67:0,30,295	1/1:10,5:14:23.58:270,24,0	0/0:22,0:23:17.03:0,17,440	0/0:10,0:10:10.53:0,11,220	0/0:26,0:26:61.64:0,62,805	1/1:8,3:11:17.05:229,17,0	0/0:22,0:22:43.94:0,44,486	0/0:7,0:7:13.28:0,13,156	0/1:9,0:9:1.81:2,0,61	0/0:14,0:14:8.51:0,9,178	0/0:10,0:9:21.01:0,21,227	0/0:23,0:23:28.16:0,28,337	1/1:9,2:11:12.12:140,12,0	1/1:8,0:8:18.03:235,18,0	0/0:5,0:5:13.28:0,13,151	0/0:15,0:13:35.12:0,35,403	0/0:20,0:20:44.08:0,44,567	0/0:6,0:6:15.03:0,15,185	0/0:16,0:16:20.06:0,20,357	0/0:14,0:14:11.37:0,11,114	0/0:10,0:10:14.37:0,14,126	0/0:15,0:15:32.46:0,32,392	0/0:17,0:17:43.04:0,43,500	0/0:19,0:19:31.94:0,32,385	0/0:16,0:16:37.93:0,38,464
chr10	35997014	.	T	TGG	937.03	PASS	AB=1.000;AC=12;AF=0.214;AN=56;BaseQRankSum=2.004;DP=366;FS=1.525;HRun=1;HaplotypeScore=90.4376;InbreedingCoeff=0.7740;MQ=73.29;MQ0=4;MQRankSum=-2.652;QD=14.42;ReadPosRankSum=-2.036;VQSLOD=0.0975;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,6:8:3.01:36,3,0	0/0:7,0:7:14.94:0,15,119	0/0:23,0:18:44.41:0,44,343	0/0:24,0:11:28.98:0,29,215	1/1:15,0:14:24.06:323,24,0	0/0:20,0:20:35.51:0,36,264	0/0:8,0:8:17.86:0,18,131	0/0:28,0:28:64.80:0,65,563	1/1:7,1:8:18.06:254,18,0	0/0:19,0:19:31.78:0,32,291	0/0:6,0:6:11.91:0,12,91	0/0:8,0:8:5.90:0,6,42	0/0:8,0:8:14.19:0,14,94	0/0:10,0:9:18.77:0,19,139	0/0:20,0:20:26.80:0,27,201	1/1:7,0:7:18.06:238,18,0	1/1:7,0:7:18.06:247,18,0	0/0:5,0:5:14.32:0,14,91	0/0:13,0:12:34.07:0,34,260	0/0:20,0:20:44.67:0,45,341	0/0:6,0:6:14.90:0,15,109	0/0:15,0:15:30.41:0,30,201	0/1:11,0:11:3.66:4,0,57	0/1:9,0:9:0.26:0,0,62	0/0:14,0:14:31.40:0,31,238	0/0:15,0:15:40.10:0,40,281	0/0:17,0:17:32.43:0,32,236	0/0:15,0:15:35.42:0,35,250
chr10	35997538	.	T	TTG	1199.04	PASS	AB=0.872;AC=28;AF=0.583;AN=48;BaseQRankSum=-2.361;DP=388;FS=0.000;HRun=0;HaplotypeScore=57.1360;InbreedingCoeff=0.1643;MQ=60.55;MQ0=8;MQRankSum=-1.925;QD=4.59;ReadPosRankSum=-1.400;VQSLOD=2.0440;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:25:11.36:0,11,56	1/1:4,2:6:3.01:44,3,0	./.	./.	0/0:13,0:13:5.98:0,6,47	0/1:14,1:15:21:68,0,21	1/1:3,6:9:9.03:132,9,0	0/1:18,0:18:0:0,0,0	0/0:12,0:12:15.02:0,15,153	1/1:16,0:16:18.42:177,18,0	1/1:13,3:16:6.01:70,6,0	./.	1/1:11,0:11:3:25,3,0	1/1:6,0:6:1.82:5,2,0	0/1:5,8:14:52.61:77,0,53	0/0:8,0:8:5.97:0,6,46	0/1:17,1:20:20.49:20,0,166	0/1:20,4:25:99:109,0,137	1/1:10,0:9:5.99:54,6,0	0/1:10,0:10:23.31:59,0,23	1/1:7,3:10:3.01:42,3,0	./.	0/0:9,0:10:11.86:0,12,111	0/0:16,0:18:29.72:0,30,278	0/1:13,6:19:49.58:118,0,50	1/1:24,0:24:19.74:206,20,0	0/1:17,2:19:19.11:100,0,19	1/1:10,0:9:5.99:48,6,0
chr10	35997543	.	T	TGTGT	771.70	PASS	AB=1.000;AC=28;AF=0.583;AN=48;BaseQRankSum=-1.241;DP=398;FS=0.000;HRun=0;HaplotypeScore=72.1893;InbreedingCoeff=0.2953;MQ=58.22;MQ0=8;MQRankSum=0.065;QD=3.19;ReadPosRankSum=-0.980;VQSLOD=1.1225;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:14.85:0,15,126	1/1:7,0:7:2.74:12,3,0	./.	./.	0/0:14,0:14:5.99:0,6,48	0/1:14,0:14:34.43:48,0,34	1/1:11,0:11:8.40:44,8,0	1/1:17,0:17:0.47:1,0,0	0/0:12,0:12:15.03:0,15,209	1/1:13,4:18:23.33:296,23,0	1/1:17,0:16:5.75:82,6,0	./.	1/1:12,0:12:2.99:25,3,0	1/1:7,0:7:2.99:23,3,0	0/1:13,0:13:12.85:13,0,81	0/0:8,0:8:5.98:0,6,47	0/0:20,0:20:11.69:0,12,252	0/1:24,0:24:13.35:13,0,180	1/1:10,0:10:6.02:65,6,0	0/1:9,0:9:34.88:35,0,37	1/1:10,0:9:2.60:10,3,0	./.	0/0:11,0:11:12.01:0,12,142	0/0:21,0:21:30.07:0,30,399	0/1:18,0:17:22.30:22,0,78	1/1:25,0:25:18.86:137,19,0	0/1:18,0:18:0.05:55,0,0	1/1:11,0:10:5.99:48,6,0
chr10	35997877	.	T	TA	6702.82	PASS	AB=1.000;AC=38;AF=0.704;AN=54;BaseQRankSum=-11.136;DP=378;FS=1.133;HRun=4;HaplotypeScore=46.2653;InbreedingCoeff=0.4300;MQ=69.38;MQ0=1;MQRankSum=1.900;QD=20.75;ReadPosRankSum=1.333;VQSLOD=3.9243;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:28:21.36:21,0,38	1/1:1,10:11:27.09:353,27,0	0/0:17,0:10:20.77:0,21,159	0/0:14,0:5:2.99:0,3,23	0/1:25,0:25:8.37:8,0,26	1/1:2,18:20:48.16:629,48,0	0/1:9,0:9:31.28:52,0,31	1/1:1,22:23:66.14:780,66,0	0/1:9,0:9:10.34:10,0,19	1/1:2,12:14:28.42:431,28,0	1/1:1,6:7:17.97:213,18,0	0/0:14,0:14:36.08:0,36,388	1/1:0,14:14:30.10:393,30,0	1/1:0,5:5:15.05:197,15,0	1/1:4,8:12:9.03:118,9,0	0/1:8,0:8:8.04:8,0,19	0/1:22,0:22:31.08:43,0,31	1/1:1,16:17:42.05:528,42,0	1/1:2,8:10:24.06:299,24,0	1/1:0,3:3:8.98:98,9,0	1/1:4,3:7:9.03:118,9,0	./.	0/0:5,0:5:12.01:0,12,119	0/0:5,0:5:12.03:0,12,135	1/1:2,13:15:29.99:393,30,0	1/1:2,31:33:96.13:1128,96,0	1/1:2,18:20:45.08:567,45,0	1/1:0,11:11:24.08:314,24,0
chr10	35997881	.	A	AT	1897.05	PASS	AB=1.000;AC=30;AF=0.536;AN=56;BaseQRankSum=-3.611;DP=363;FS=3.287;HRun=3;HaplotypeScore=58.1968;InbreedingCoeff=0.7006;MQ=68.67;MQ0=1;MQRankSum=-0.197;QD=8.70;ReadPosRankSum=4.118;VQSLOD=1.1131;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:72.89:0,73,660	1/1:10,0:10:25.51:135,26,0	0/0:16,0:10:8.95:0,9,132	0/0:14,0:5:9.02:0,9,93	0/0:22,0:22:60.43:0,60,519	1/1:18,0:18:25.67:187,26,0	1/1:3,6:9:12.04:168,12,0	0/1:25,0:25:1.90:153,0,2	0/0:9,0:9:15.84:0,16,130	0/1:14,0:14:4:93,0,4	1/1:6,0:6:11.98:60,12,0	0/0:13,0:13:33.09:0,33,386	1/1:14,0:14:28.14:138,28,0	1/1:5,0:5:14.11:70,14,0	1/1:7,0:7:8.20:37,8,0	0/0:10,0:10:19.85:0,20,174	0/0:22,0:22:54.72:0,55,458	1/1:19,0:19:20.80:167,21,0	0/1:10,0:10:1.61:73,0,2	1/1:3,0:3:5.10:28,5,0	0/1:4,0:4:15.02:31,0,15	0/0:1,0:1:3:0,3,25	0/0:5,0:5:15.04:0,15,170	0/0:4,0:4:12.04:0,12,142	1/1:13,0:13:27.75:138,28,0	1/1:32,0:32:59.28:326,59,0	1/1:18,0:18:16.03:177,16,0	1/1:11,0:11:22.87:122,23,0
chr10	35998542	.	ACC	A	919.78	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.318;DP=567;FS=6.885;HRun=4;HaplotypeScore=67.0205;InbreedingCoeff=0.9985;MQ=60.54;MQ0=1;MQRankSum=-1.121;QD=36.79;ReadPosRankSum=-0.477;VQSLOD=2.7748;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,24:25:69.23:1015,69,0	0/0:12,0:12:36.11:0,36,644	0/0:17,0:14:38.06:0,38,575	0/0:20,0:17:45.15:0,45,826	0/0:17,0:17:51.17:0,51,952	0/0:12,0:12:33.10:0,33,587	0/0:29,0:29:75.24:0,75,1368	0/0:40,0:40:99:0,108,1945	0/0:21,0:21:60.20:0,60,1093	0/0:13,0:13:36.12:0,36,673	0/0:14,0:14:39.13:0,39,712	0/0:18,0:18:48.13:0,48,834	0/0:14,0:14:42.14:0,42,785	0/0:11,0:11:33.11:0,33,616	0/0:16,0:16:48.16:0,48,898	0/0:13,0:13:33.11:0,33,617	0/0:38,0:38:99:0,108,1990	0/0:26,0:26:75.26:0,75,1403	0/0:14,0:13:39.12:0,39,691	0/0:13,0:13:39.13:0,39,694	0/0:22,0:22:63.22:0,63,1179	0/0:14,0:14:36.12:0,36,671	0/0:13,0:13:39.13:0,39,727	0/0:40,0:40:99:0,120,2247	0/0:23,0:22:60.17:0,60,1034	0/0:33,0:33:99:0,99,1826	0/0:18,0:18:54.18:0,54,994	0/0:21,0:21:57.20:0,57,1065
chr10	35998640	.	CT	C	197.44	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.406;DP=635;FS=15.351;HRun=2;HaplotypeScore=66.2700;InbreedingCoeff=0.8805;MQ=51.32;MQ0=91;MQRankSum=-4.448;QD=9.87;ReadPosRankSum=-0.972;VQSLOD=-0.0761;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,9:11:24.54:291,25,0	0/0:7,0:6:18.06:0,18,245	0/0:15,0:6:18.05:0,18,228	0/0:17,0:11:12.47:0,12,252	0/0:15,0:15:35.50:0,36,429	0/0:19,0:17:46.97:0,47,621	0/0:20,0:18:48.11:0,48,618	0/0:31,0:26:69.22:0,69,922	0/0:28,0:26:74.05:0,74,1002	0/0:28,0:19:54.18:0,54,726	0/0:19,0:19:48.16:0,48,644	0/0:18,0:16:48.16:0,48,653	0/0:21,0:19:56.40:0,56,732	0/0:13,0:10:27.02:0,27,319	0/0:30,0:22:63.16:0,63,810	0/0:29,0:24:66.22:0,66,914	0/0:38,0:34:91.51:0,92,1209	0/0:23,0:21:47.02:0,47,796	0/0:14,0:10:6.98:0,7,300	0/0:15,0:14:34.91:0,35,428	0/0:38,0:34:97.18:0,97,1245	0/0:15,0:12:36.12:0,36,484	0/0:18,0:14:36.11:0,36,472	0/0:53,0:40:88.05:0,88,1186	0/0:19,0:18:49.87:0,50,624	0/0:28,0:22:66.04:0,66,843	0/0:23,0:21:62.24:0,62,827	0/0:21,0:14:35.66:0,36,490
chr10	35998646	.	CT	C	151.83	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.114;DP=642;FS=15.959;HRun=2;HaplotypeScore=64.6104;InbreedingCoeff=0.9563;MQ=48.74;MQ0=119;MQRankSum=-4.394;QD=8.43;ReadPosRankSum=0.089;VQSLOD=-0.3725;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,8:9:21.01:244,21,0	0/0:7,0:6:15.05:0,15,204	0/0:14,0:5:15.05:0,15,198	0/0:16,0:10:22.31:0,22,283	0/0:16,0:15:39.37:0,39,469	0/0:18,0:16:41.97:0,42,542	0/0:19,0:16:45.15:0,45,610	0/0:29,0:23:57.19:0,57,776	0/0:29,0:26:75.25:0,75,1040	0/0:30,0:19:57.16:0,57,757	0/0:20,0:19:42.14:0,42,572	0/0:17,0:15:45.15:0,45,613	0/0:23,0:20:57.18:0,57,759	0/0:13,0:10:25.33:0,25,330	0/0:30,0:21:60.20:0,60,819	0/0:31,0:24:62.88:0,63,874	0/0:40,0:31:84.01:0,84,1088	0/0:28,0:22:56.61:0,57,794	0/0:12,0:7:20.98:0,21,262	0/0:13,0:12:33.10:0,33,429	0/0:36,0:32:86.38:0,86,1139	0/0:16,0:13:34.89:0,35,434	0/0:17,0:12:34.93:0,35,454	0/0:52,0:38:86.60:0,87,1149	0/0:19,0:17:49.96:0,50,643	0/0:31,0:24:72.22:0,72,954	0/0:24,0:21:63.21:0,63,862	0/0:23,0:15:32.64:0,33,427
chr10	35998652	.	CT	C	140.46	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.128;DP=633;FS=15.734;HRun=2;HaplotypeScore=62.3462;InbreedingCoeff=0.8672;MQ=46.13;MQ0=141;MQRankSum=-4.378;QD=7.39;ReadPosRankSum=-0.397;VQSLOD=-0.6374;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,8:8:20.78:232,21,0	0/0:6,0:5:15.02:0,15,185	0/0:11,0:3:6.02:0,6,75	0/0:12,1:8:15.05:0,15,198	0/0:17,0:16:43.95:0,44,564	0/0:16,0:14:36.12:0,36,493	0/0:19,0:16:45.15:0,45,613	0/0:28,0:21:54.14:0,54,715	0/0:29,0:25:72.22:0,72,982	0/0:28,0:17:51.13:0,51,671	0/0:18,0:17:42.11:0,42,527	0/0:16,0:14:42.14:0,42,572	0/0:24,0:19:55:0,55,699	0/0:13,0:10:27.09:0,27,368	0/0:31,0:22:63.20:0,63,845	0/0:33,0:24:63.21:0,63,874	0/0:36,0:26:69.23:0,69,948	0/0:30,0:22:53.58:0,54,768	0/0:12,0:6:18.06:0,18,246	0/0:14,0:12:33.11:0,33,452	0/0:37,0:33:88.36:0,88,1147	0/0:16,0:12:33.11:0,33,450	0/0:17,0:11:33.11:0,33,445	0/0:54,0:36:85.88:0,86,1063	0/0:19,0:16:48.15:0,48,641	0/0:31,0:23:63.21:0,63,859	0/0:23,0:19:57.19:0,57,780	0/0:23,0:13:29.60:0,30,388
chr10	35998728	.	T	TC	1591.22	PASS	AB=0.983;AC=26;AF=0.500;AN=52;BaseQRankSum=2.928;DP=476;FS=2.178;HRun=1;HaplotypeScore=97.6400;InbreedingCoeff=0.0713;MQ=28.90;MQ0=131;MQRankSum=3.899;QD=4.28;ReadPosRankSum=3.822;VQSLOD=0.6648;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:20,1:6:2.22:7,2,0	0/0:4,0:3:2.49:0,2,6	./.	./.	0/0:10,0:8:1.91:0,2,5	0/1:15,0:14:14.32:74,0,14	0/0:14,0:13:4.79:0,5,10	1/1:29,0:22:6.06:79,6,0	0/1:20,0:17:99:120,0,121	1/1:17,0:12:10.71:99,11,0	0/1:10,0:7:2.20:38,0,2	0/0:12,3:11:2.21:0,2,4	1/1:18,2:16:5.71:95,6,0	0/0:9,0:7:0.43:0,0,2	0/1:24,0:18:2.73:143,0,3	0/1:30,0:21:99:200,0,101	0/1:15,0:5:24.88:25,0,65	1/1:18,0:8:2.19:45,2,0	1/1:11,0:5:3.74:50,4,0	0/1:10,0:9:2.25:37,0,2	0/0:16,1:9:3.13:0,3,7	0/0:21,2:19:8.13:0,8,19	0/0:9,3:12:6.76:0,7,16	0/1:43,6:24:0.82:89,0,1	0/1:19,0:14:0.25:82,0,0	1/1:25,0:19:9.49:137,9,0	0/1:17,0:12:17.49:273,0,17	1/1:21,0:9:8.15:134,8,0
chr10	35998800	.	C	CTCACTGTTCAAT	2634.99	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=1.192;DP=446;FS=46.363;HRun=0;HaplotypeScore=157.8850;InbreedingCoeff=0.9328;MQ=74.86;MQ0=3;MQRankSum=-7.453;QD=114.56;ReadPosRankSum=-4.319;VQSLOD=1.0446;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:15,8:22:60.20:2730,60,0	0/0:5,0:5:12.04:0,12,430	0/0:36,0:35:63.21:0,63,1766	0/0:19,0:19:45.15:0,45,1530	0/0:16,0:16:42.14:0,42,1504	0/0:10,0:10:24.08:0,24,805	0/0:15,0:15:36.12:0,36,1158	0/0:15,0:15:36.11:0,36,1123	0/0:12,0:12:27.09:0,27,964	0/0:21,0:21:57.20:0,57,2026	0/0:11,0:11:33.11:0,33,1144	0/0:13,0:13:32.85:0,33,1123	0/0:14,0:14:39.13:0,39,1342	0/0:14,0:14:33.11:0,33,1129	0/0:23,0:23:63.20:0,63,2025	0/0:13,0:13:27.09:0,27,861	0/0:24,0:24:72.23:0,72,2464	0/0:14,0:14:42.13:0,42,1383	0/0:9,0:9:24.07:0,24,742	0/0:10,0:10:27.09:0,27,930	0/0:22,0:21:63.22:0,63,2185	0/0:16,0:15:39.13:0,39,1396	0/0:14,0:14:42.12:0,42,1338	0/0:31,0:31:66.23:0,66,2358	0/0:6,0:6:12.02:0,12,340	0/0:14,0:14:36.12:0,36,1107	0/0:18,0:18:39.11:0,39,1221	0/0:8,0:8:24.07:0,24,778
chr10	35999053	.	C	CTTT	992.02	PASS	AB=0.688;AC=7;AF=0.125;AN=56;BaseQRankSum=-2.965;DP=385;FS=5.350;HRun=12;HaplotypeScore=56.6684;InbreedingCoeff=0.6930;MQ=66.25;MQ0=1;MQRankSum=0.260;QD=22.04;ReadPosRankSum=-0.115;VQSLOD=2.0133;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:47.69:0,48,515	0/0:5,0:5:15.04:0,15,168	0/0:17,0:8:4.02:0,4,28	0/0:11,0:8:2.51:0,3,27	1/1:1,8:12:33.05:478,33,0	0/0:11,0:11:17.91:0,18,202	0/0:12,0:13:29.93:0,30,320	0/0:37,0:40:74.78:0,75,801	1/1:3,2:12:14.99:177,15,0	0/0:19,0:19:42.04:0,42,463	0/0:9,0:9:17.98:0,18,202	0/0:11,0:12:20.90:0,21,219	0/0:11,0:11:17.89:0,18,201	0/0:8,0:8:11.98:0,12,135	0/0:18,0:19:38.90:0,39,421	1/1:1,8:10:15.05:275,15,0	0/1:6,5:11:15.56:205,0,16	0/0:8,0:8:14.99:0,15,168	0/0:21,0:23:47.90:0,48,502	0/0:5,0:8:17.79:0,18,154	0/0:11,0:11:24.02:0,24,269	0/0:2,0:2:6.02:0,6,67	0/0:9,0:9:24.06:0,24,268	0/0:5,0:5:15.04:0,15,168	0/0:8,0:8:21.04:0,21,236	0/0:17,0:20:46.36:0,46,504	0/0:22,0:23:53.92:0,54,579	0/0:26,0:27:55.47:0,55,621
chr10	36000524	.	CTGGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	C	3041.44	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=-2.882;DP=430;FS=50.112;HRun=0;HaplotypeScore=237.3464;InbreedingCoeff=0.0686;MQ=67.18;MQ0=46;MQRankSum=0.408;QD=13.52;ReadPosRankSum=-1.015;VQSLOD=1.0183;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:16:9.03:0,9,179	0/1:5,0:4:12.50:13,0,48	0/0:41,0:15:28.10:0,28,741	0/0:47,0:15:41.90:0,42,1202	1/1:21,0:19:57.19:982,57,0	0/1:13,0:13:99:171,0,385	0/0:9,0:9:14.63:0,15,178	0/1:24,0:23:99:252,0,414	1/1:13,0:11:15.05:245,15,0	0/1:19,0:17:99:229,0,286	0/1:14,0:13:99:155,0,152	0/0:11,0:10:29.89:0,30,1120	0/0:17,0:15:3.01:0,3,56	0/0:9,0:8:3.01:0,3,31	1/1:12,0:11:3.01:133,3,0	1/1:3,10:11:6.90:327,7,0	1/1:15,0:11:12.04:208,12,0	0/0:13,0:11:6.02:0,6,396	0/1:11,0:7:59.41:59,0,75	0/1:14,0:12:73.21:73,0,238	0/1:7,0:6:3.39:3,0,139	0/1:7,0:6:29.73:30,0,140	0/0:15,0:16:17.49:0,17,389	0/0:8,0:6:16.25:0,16,542	0/1:14,0:10:86.09:181,0,86	0/0:15,0:13:28.52:0,29,464	1/1:15,0:10:0.89:2,1,0	0/1:8,0:6:9.24:151,0,9
chr10	36000525	.	TGG	T	5276.55	PASS	AB=0.761;AC=48;AF=0.857;AN=56;BaseQRankSum=-4.389;DP=431;FS=24.675;HRun=3;HaplotypeScore=62.3630;InbreedingCoeff=0.3573;MQ=66.95;MQ0=52;MQRankSum=-0.439;QD=14.66;ReadPosRankSum=1.049;VQSLOD=0.6601;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,15:16:9.03:111,9,0	1/1:1,4:4:6.02:75,6,0	0/1:41,0:15:17.73:18,0,209	0/0:45,0:15:18.93:0,19,309	1/1:3,0:19:57.11:612,57,0	1/1:9,4:13:36.12:492,36,0	1/1:0,9:9:15.05:187,15,0	1/1:3,20:22:11.77:760,12,0	1/1:2,0:11:15.04:165,15,0	1/1:17,2:18:39.60:549,40,0	1/1:13,1:13:18.06:219,18,0	1/1:12,0:10:0.76:4,1,0	1/1:2,14:14:3.01:37,3,0	1/1:1,7:8:3.01:37,3,0	1/1:11,0:11:3.01:37,3,0	1/1:12,0:11:6.38:49,6,0	1/1:6,0:9:12.03:134,12,0	0/1:2,10:10:32.73:33,0,48	1/1:3,8:7:21.07:311,21,0	1/1:1,13:13:36.04:421,36,0	1/1:7,0:6:18.06:260,18,0	1/1:1,5:6:15.52:187,16,0	0/0:1,0:16:2.78:0,3,6	0/0:8,0:6:3.28:0,3,27	1/1:12,2:10:9.03:111,9,0	1/1:5,10:13:28:355,28,0	1/1:5,10:10:3.01:39,3,0	1/1:9,0:6:6.02:74,6,0
chr10	36000526	.	GGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	G	6067.99	PASS	AB=1.000;AC=45;AF=0.804;AN=56;BaseQRankSum=0.106;DP=431;FS=11.717;HRun=0;HaplotypeScore=197.9668;InbreedingCoeff=0.4237;MQ=65.65;MQ0=55;MQRankSum=1.151;QD=17.49;ReadPosRankSum=4.053;VQSLOD=2.9774;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:16:7.52:61,8,0	1/1:5,0:4:5.99:57,6,0	0/1:41,0:14:15.23:15,0,413	0/0:47,0:15:37.56:0,38,959	1/1:21,0:19:57.11:610,57,0	1/1:13,1:13:28.48:575,28,0	1/1:9,0:9:14.99:167,15,0	0/1:23,0:22:99:743,0,244	1/1:13,0:11:15.04:165,15,0	1/1:5,14:17:34.42:729,34,0	1/1:3,11:13:18:423,18,0	0/0:12,0:10:14.69:0,15,770	1/1:17,0:14:2.94:18,3,0	1/1:9,0:8:3.01:37,3,0	1/1:1,0:11:3.01:210,3,0	1/1:13,0:11:6.49:263,6,0	1/1:15,0:9:12.03:131,12,0	0/1:12,0:10:13.24:13,0,312	1/1:11,0:7:21.06:291,21,0	1/1:14,0:12:34.91:349,35,0	1/1:7,0:6:18.04:239,18,0	1/1:7,0:6:5.35:156,5,0	0/0:17,0:17:15.92:0,16,326	0/0:8,0:6:11.39:0,11,311	1/1:6,0:9:8.98:306,9,0	1/1:15,0:12:1.38:204,1,0	1/1:15,0:10:3.01:39,3,0	1/1:6,0:6:6.02:268,6,0
chr10	36000699	.	G	GC	2091.98	PASS	AB=0.529;AC=9;AF=0.161;AN=56;BaseQRankSum=2.007;DP=503;FS=8.753;HRun=7;HaplotypeScore=53.9703;InbreedingCoeff=0.9136;MQ=89.77;MQ0=0;MQRankSum=-1.761;QD=29.46;ReadPosRankSum=0.499;VQSLOD=3.9437;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,20:21:54.17:652,54,0	0/0:10,0:10:30.05:0,30,290	0/0:22,0:21:37.52:0,38,331	0/0:23,0:22:39.98:0,40,388	1/1:2,20:22:57.17:687,57,0	0/0:28,0:28:78.10:0,78,747	0/0:20,0:20:57.08:0,57,545	0/0:25,0:25:60.09:0,60,579	0/1:1,8:9:1.89:263,0,2	0/0:23,0:23:60.09:0,60,579	0/0:20,0:20:57.08:0,57,546	0/0:21,0:21:60.10:0,60,579	0/0:22,0:22:60.10:0,60,579	0/0:19,0:19:57.06:0,57,542	0/0:18,0:18:51.08:0,51,492	1/1:0,4:4:12.04:145,12,0	1/1:0,15:15:42.13:507,42,0	0/0:12,0:12:36.06:0,36,348	0/0:16,0:16:42.06:0,42,405	0/0:24,0:24:69.11:0,69,666	0/0:15,0:15:45.07:0,45,434	0/0:19,0:19:57.09:0,57,550	0/0:13,0:13:39.06:0,39,377	0/0:8,0:8:24.04:0,24,232	0/0:17,0:17:48.08:0,48,464	0/0:14,0:14:42.07:0,42,405	0/0:27,0:27:78.13:0,78,753	0/0:16,0:16:45.07:0,45,434
chr10	36001289	.	C	CA	17389.07	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-16.415;DP=605;FS=1.028;HRun=0;HaplotypeScore=68.0127;InbreedingCoeff=0.9993;MQ=81.82;MQ0=0;MQRankSum=-4.048;QD=43.91;ReadPosRankSum=1.574;VQSLOD=5.3495;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,99,1384	1/1:0,8:8:21.07:336,21,0	0/0:21,0:21:57.16:0,57,761	0/0:12,0:12:36.11:0,36,486	0/0:21,0:21:60.17:0,60,744	1/1:0,19:19:51.17:815,51,0	1/1:0,18:18:42.14:672,42,0	1/1:0,27:27:81.26:1273,81,0	0/0:22,0:22:66.20:0,66,836	1/1:1,20:21:63.21:1005,63,0	1/1:0,21:21:60.20:959,60,0	0/0:23,0:23:69.22:0,69,944	1/1:1,19:20:48.16:767,48,0	1/1:0,17:17:42.14:672,42,0	1/1:0,14:14:36.12:575,36,0	0/0:18,0:18:48.16:0,48,623	0/0:22,0:22:66.21:0,66,853	1/1:1,35:36:96.28:1507,96,0	1/1:1,16:17:51.16:792,51,0	1/1:0,26:26:75.26:1199,75,0	1/1:0,31:31:84.29:1343,84,0	1/1:0,17:17:51.17:815,51,0	0/0:15,0:14:45.15:0,45,626	0/0:20,0:20:60.20:0,60,839	1/1:0,20:20:48.16:768,48,0	1/1:1,30:31:90.29:1416,90,0	1/1:1,27:28:81.27:1277,81,0	1/1:0,25:25:75.26:1199,75,0
chr10	36001403	.	A	AT	2252.72	PASS	AB=0.933;AC=9;AF=0.161;AN=56;BaseQRankSum=-7.620;DP=481;FS=4.461;HRun=8;HaplotypeScore=49.7282;InbreedingCoeff=0.8667;MQ=67.80;MQ0=0;MQRankSum=1.553;QD=23.71;ReadPosRankSum=3.509;VQSLOD=4.3404;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:81.01:0,81,730	0/0:10,0:10:24.01:0,24,220	0/0:12,0:10:3.05:0,3,95	0/0:11,0:9:14.27:0,14,137	1/1:7,21:28:63.15:713,63,0	0/0:19,0:19:48.02:0,48,439	0/0:13,0:13:39.01:0,39,353	0/0:25,0:25:56.96:0,57,505	1/1:1,17:18:51.15:589,51,0	0/0:17,0:17:42.02:0,42,382	0/1:13,1:14:1.55:2,0,241	0/0:11,0:11:33.02:0,33,302	0/0:17,0:17:41.98:0,42,377	0/0:16,0:16:38.93:0,39,346	0/0:19,0:19:51.03:0,51,467	1/1:1,5:6:15.04:173,15,0	1/1:1,28:29:81.24:935,81,0	0/0:24,0:23:63:0,63,570	0/0:16,0:16:33:0,33,302	0/0:20,1:21:22.41:0,22,459	0/0:9,0:9:26.97:0,27,239	0/0:10,0:10:30:0,30,266	0/0:15,0:15:36.01:0,36,326	0/0:11,0:11:30.01:0,30,274	0/0:24,0:24:66.03:0,66,604	0/0:24,0:24:69.01:0,69,621	0/0:19,0:19:53.99:0,54,486	0/0:15,0:15:45.02:0,45,412
chr10	36001510	.	AGT	A	1030.17	PASS	AB=0.953;AC=31;AF=0.554;AN=56;BaseQRankSum=12.045;DP=599;FS=5.123;HRun=0;HaplotypeScore=189.0108;InbreedingCoeff=0.4446;MQ=61.06;MQ0=0;MQRankSum=2.313;QD=2.67;ReadPosRankSum=3.751;VQSLOD=2.4512;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:35,1:36:3.33:66,3,0	1/1:4,0:4:4.62:11,5,0	0/0:19,0:17:42.09:0,42,681	0/0:19,0:19:50.57:0,51,948	0/0:31,0:31:87.74:0,88,1626	1/1:24,1:25:15.85:84,16,0	0/1:18,0:18:16.03:38,0,16	0/1:21,2:23:11.38:85,0,11	0/0:22,0:22:63.22:0,63,1217	0/1:17,2:19:1.29:70,0,1	1/1:12,0:12:0.02:6,0,0	0/0:25,0:25:69.24:0,69,1330	1/1:20,0:20:7:68,7,0	0/1:20,2:21:8:48,0,8	1/1:27,0:27:7.87:114,8,0	0/0:17,0:17:51.17:0,51,968	0/0:45,0:45:99:0,131,2495	1/1:26,0:26:27.94:148,28,0	0/1:10,0:10:4.47:4,0,7	1/1:16,1:17:7.82:27,8,0	1/1:26,4:30:28.23:147,28,0	1/1:17,2:19:5.72:47,6,0	0/0:12,0:12:33.11:0,33,633	0/0:23,0:23:63.20:0,63,1182	1/1:12,3:15:8.38:39,8,0	0/1:25,2:26:22.14:75,0,22	0/1:20,0:20:2.93:53,0,3	1/1:16,0:16:3.56:89,4,0
chr10	36001511	.	G	GC	10653.10	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=16.049;DP=581;FS=1.913;HRun=0;HaplotypeScore=144.1893;InbreedingCoeff=0.9676;MQ=62.71;MQ0=0;MQRankSum=-5.919;QD=28.79;ReadPosRankSum=4.157;VQSLOD=4.7222;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,34:38:90.03:1019,90,0	1/1:0,4:4:12.04:147,12,0	0/0:19,0:17:39.11:0,39,499	0/0:20,0:20:24.39:0,24,679	0/0:30,0:30:89.07:0,89,1199	1/1:2,22:24:66.05:773,66,0	1/1:2,14:16:21.56:438,22,0	1/1:3,14:17:24.76:499,25,0	0/0:22,0:22:63.21:0,63,881	1/1:2,16:18:46.58:584,47,0	1/1:0,11:11:7.18:251,7,0	0/0:24,0:24:69.23:0,69,965	1/1:1,18:19:57.16:667,57,0	1/1:2,19:20:57.11:629,57,0	1/1:3,24:27:78.11:869,78,0	0/0:17,0:17:51.17:0,51,712	0/0:43,1:44:99:0,102,1774	1/1:0,24:24:69.15:843,69,0	1/1:0,9:9:27.06:294,27,0	1/1:2,16:18:39.11:459,39,0	1/1:5,26:31:40.17:655,40,0	1/1:2,15:18:7.09:240,7,0	0/0:12,0:12:33.11:0,33,459	0/0:23,0:23:63.19:0,63,862	1/1:4,11:15:36.06:431,36,0	1/1:2,22:23:69.14:767,69,0	1/1:1,19:20:48.07:521,48,0	1/1:2,14:16:48.14:567,48,0
chr10	36001512	.	T	TGG	14328.38	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=16.304;DP=608;FS=0.688;HRun=1;HaplotypeScore=154.5940;InbreedingCoeff=0.9948;MQ=63.09;MQ0=0;MQRankSum=-7.322;QD=35.91;ReadPosRankSum=2.332;VQSLOD=5.1673;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,34:41:99:1377,100,0	1/1:0,4:4:12.04:187,12,0	0/0:17,0:15:35.23:0,35,475	0/0:21,0:21:52.68:0,53,787	0/0:29,0:29:81.75:0,82,1237	1/1:2,22:24:69.17:1007,69,0	1/1:5,14:19:52.56:691,53,0	1/1:6,14:20:48.62:685,49,0	0/0:21,0:21:63.21:0,63,963	1/1:5,16:21:59.70:876,60,0	1/1:1,11:12:27.04:370,27,0	0/0:24,0:24:72.20:0,72,1038	1/1:3,18:21:59.19:857,59,0	1/1:5,17:21:57.19:825,57,0	1/1:3,24:27:72.16:1050,72,0	0/0:17,0:17:48.16:0,48,734	0/0:44,1:45:92.16:0,92,1934	1/1:1,24:25:74.06:1060,74,0	1/1:1,9:10:30.10:424,30,0	1/1:2,16:18:39.13:590,39,0	1/1:7,26:33:66.05:902,66,0	1/1:2,15:18:29.91:362,30,0	0/0:12,0:12:33.11:0,33,503	0/0:23,0:23:63.20:0,63,940	1/1:5,11:16:42.08:594,42,0	1/1:6,21:26:69.85:1007,70,0	1/1:5,19:24:60.14:807,60,0	1/1:3,14:17:42.04:658,42,0
chr10	36003146	.	GT	G	14084.43	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=7.553;DP=632;FS=3.870;HRun=1;HaplotypeScore=69.4190;InbreedingCoeff=0.9995;MQ=79.91;MQ0=0;MQRankSum=-2.243;QD=38.69;ReadPosRankSum=1.646;VQSLOD=5.6401;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,151,2334	1/1:0,10:10:27.05:355,27,0	0/0:19,0:19:44.20:0,44,640	0/0:17,0:17:43.83:0,44,572	0/0:30,0:30:87.30:0,87,1350	1/1:0,28:28:78.26:1090,78,0	1/1:0,21:21:54.18:755,54,0	1/1:0,22:22:63.14:842,63,0	0/0:24,0:24:72.23:0,72,1101	1/1:0,19:19:57.19:795,57,0	1/1:0,15:15:42.14:587,42,0	0/0:23,0:23:69.21:0,69,1033	1/1:0,22:22:63.21:873,63,0	1/1:0,16:16:42.14:587,42,0	1/1:0,26:26:75.25:1048,75,0	0/0:23,0:23:69.21:0,69,1035	0/0:35,0:35:99:0,105,1587	1/1:0,26:26:72.24:1006,72,0	1/1:1,16:17:48.15:639,48,0	1/1:0,15:15:39.13:545,39,0	1/1:0,39:39:99:1594,114,0	1/1:0,23:23:60.20:838,60,0	0/0:23,0:23:69.18:0,69,1029	0/0:24,0:24:69.22:0,69,1057	1/1:0,21:21:54.18:753,54,0	1/1:0,21:21:63.20:856,63,0	1/1:0,15:15:42.14:587,42,0	1/1:0,8:8:24.08:335,24,0
chr10	36005219	.	TTTTTTTTG	T	1442.48	PASS	AB=0.989;AC=31;AF=0.554;AN=56;BaseQRankSum=-1.089;DP=463;FS=0.000;HRun=0;HaplotypeScore=112.4309;InbreedingCoeff=-0.1551;MQ=55.98;MQ0=28;MQRankSum=-2.664;QD=4.00;ReadPosRankSum=-3.700;VQSLOD=0.3033;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,0:5:0.47:1,0,0	1/1:7,0:6:6.87:50,7,0	0/0:30,0:7:13.94:0,14,238	0/0:28,0:13:14.77:0,15,153	1/1:1,0:1:0.47:1,0,0	0/1:15,0:14:5.61:17,0,6	1/1:21,0:21:11.36:94,11,0	0/1:19,0:18:58.24:73,0,58	1/1:4,0:3:2.24:5,2,0	0/1:20,1:19:64.19:100,0,64	0/1:19,0:19:40.89:41,0,105	0/0:10,0:10:24.08:0,24,724	1/1:16,0:16:0.59:115,1,0	1/1:19,0:19:4.36:94,4,0	0/1:22,0:22:26.68:119,0,27	1/1:3,0:2:2.13:5,2,0	0/1:8,0:4:0:0,0,0	0/1:20,0:18:61.01:61,0,109	0/1:23,0:22:13.55:105,0,14	0/1:19,3:21:56.23:251,0,56	0/1:9,0:7:13.86:14,0,17	0/1:21,0:19:57.92:58,0,78	0/0:13,0:12:30.04:0,30,896	0/0:21,0:20:38.62:0,39,1168	0/1:30,0:28:44.49:172,0,44	0/1:24,0:24:27.35:136,0,27	0/1:24,0:22:19.87:36,0,20	0/1:7,0:6:6.39:48,0,6
chr10	36005220	.	TTTTTTTG	T	3047.90	PASS	AB=0.975;AC=40;AF=0.714;AN=56;BaseQRankSum=-1.850;DP=459;FS=6.291;HRun=0;HaplotypeScore=99.2186;InbreedingCoeff=0.4471;MQ=55.85;MQ0=28;MQRankSum=-3.925;QD=8.56;ReadPosRankSum=-5.246;VQSLOD=-0.3202;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:5,0:4:0.89:2,1,0	1/1:7,0:6:8.99:96,9,0	0/0:30,0:7:13.64:0,14,236	0/0:28,0:13:14.36:0,14,125	1/1:1,0:1:0.89:2,1,0	1/1:15,0:14:6.45:55,6,0	1/1:20,1:21:13.09:143,13,0	0/1:19,0:18:24.47:138,0,24	1/1:4,0:3:3.02:7,3,0	1/1:21,0:19:10.72:162,11,0	0/1:19,0:19:1.39:202,0,1	0/0:10,0:10:24.08:0,24,622	1/1:15,1:16:29.72:212,30,0	1/1:19,0:19:26.28:182,26,0	1/1:23,0:23:40.88:285,41,0	1/1:3,0:2:2.44:7,2,0	0/1:7,0:3:0:0,0,0	0/1:19,1:18:20.79:134,0,21	1/1:21,0:20:36.34:278,36,0	1/1:20,1:20:4.75:277,5,0	0/1:8,1:7:12.67:15,0,13	0/1:20,0:18:3.83:145,0,4	0/0:13,0:12:30.03:0,30,770	0/0:22,0:21:37.94:0,38,1040	1/1:28,1:27:23.35:425,23,0	1/1:23,1:24:15.18:288,15,0	1/1:22,1:21:4.02:81,4,0	1/1:9,0:8:11.88:82,12,0
chr10	36005221	.	TTTTTTG	T	5001.85	PASS	AB=0.821;AC=44;AF=0.786;AN=56;BaseQRankSum=-2.710;DP=465;FS=8.130;HRun=0;HaplotypeScore=87.7673;InbreedingCoeff=0.7343;MQ=54.11;MQ0=33;MQRankSum=-3.327;QD=13.86;ReadPosRankSum=-4.912;VQSLOD=0.9215;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:5,0:4:1.25:3,1,0	1/1:2,5:6:8.99:139,9,0	0/0:30,0:7:13.05:0,13,216	0/0:26,0:12:12.43:0,12,99	1/1:1,0:1:1.25:3,1,0	1/1:14,1:14:8.89:105,9,0	1/1:20,1:21:13.22:186,13,0	1/1:18,1:18:3.38:204,3,0	1/1:4,0:3:4.05:9,4,0	1/1:20,1:19:32.46:269,32,0	1/1:18,1:19:29.71:332,30,0	0/0:12,0:11:27.02:0,27,534	1/1:16,0:16:44.11:307,44,0	1/1:18,1:19:38.79:334,39,0	1/1:24,1:24:58.33:485,58,0	1/1:3,0:2:3.28:8,3,0	0/1:7,0:2:0:0,0,0	1/1:20,0:18:27.27:215,27,0	1/1:21,0:20:49.45:395,49,0	1/1:23,0:22:36.71:458,37,0	0/1:4,5:7:0.78:31,0,1	1/1:18,2:18:39.93:332,40,0	0/0:14,0:13:30.91:0,31,665	0/0:22,0:21:38.49:0,38,907	1/1:24,5:26:55.19:588,55,0	1/1:24,0:23:47.40:382,47,0	1/1:23,0:21:11.39:109,11,0	1/1:10,0:9:16.12:108,16,0
chr10	36005222	.	TTTTTG	T	5555.40	PASS	AB=1.000;AC=45;AF=0.804;AN=56;BaseQRankSum=-1.879;DP=464;FS=4.942;HRun=0;HaplotypeScore=78.3286;InbreedingCoeff=0.7680;MQ=54.00;MQ0=35;MQRankSum=-3.621;QD=15.43;ReadPosRankSum=-4.587;VQSLOD=2.4483;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,0:4:1.25:3,1,0	1/1:7,0:6:8.99:111,9,0	0/0:30,0:7:12.88:0,13,195	0/0:25,0:11:8.71:0,9,85	1/1:2,0:1:1.25:3,1,0	1/1:14,1:14:9.02:121,9,0	1/1:4,16:20:13.11:175,13,0	1/1:16,2:17:5.96:202,6,0	1/1:3,0:2:2.80:7,3,0	1/1:6,15:19:35.42:298,35,0	1/1:16,3:19:50.55:440,51,0	0/0:12,0:11:27.01:0,27,440	1/1:15,1:16:45.25:317,45,0	1/1:18,1:19:40.48:347,40,0	1/1:24,1:24:62.05:553,62,0	1/1:3,0:2:3.28:8,3,0	0/1:8,0:2:0:0,0,0	1/1:18,2:18:35.23:267,35,0	1/1:5,16:20:54.79:462,55,0	1/1:21,2:22:42.64:485,43,0	1/1:9,0:7:7.75:45,8,0	1/1:20,0:18:49.45:383,49,0	0/0:14,0:13:30.91:0,31,571	0/0:23,0:22:37.13:0,37,771	1/1:28,1:26:70.35:616,70,0	1/1:21,3:23:54.56:437,55,0	1/1:9,14:21:11.25:156,11,0	1/1:10,0:9:17.76:121,18,0
chr10	36005223	.	TTTTG	T	5553.98	PASS	AB=1.000;AC=43;AF=0.796;AN=54;BaseQRankSum=-1.850;DP=461;FS=4.089;HRun=0;HaplotypeScore=70.4080;InbreedingCoeff=0.7746;MQ=52.37;MQ0=39;MQRankSum=-3.755;QD=15.78;ReadPosRankSum=-5.150;VQSLOD=2.4999;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	1/1:7,0:6:8.99:98,9,0	0/0:30,0:7:10.45:0,10,157	0/0:24,0:10:2.58:0,3,69	1/1:3,0:1:1.25:3,1,0	1/1:3,11:13:9.03:121,9,0	1/1:20,0:19:13.15:141,13,0	1/1:18,0:17:17.64:218,18,0	1/1:2,0:1:1.55:4,2,0	1/1:21,0:19:27.79:271,28,0	1/1:20,0:19:51.84:417,52,0	0/0:12,0:11:26.69:0,27,346	1/1:15,0:15:44.19:328,44,0	1/1:19,0:19:40.50:327,40,0	1/1:25,1:25:65.02:565,65,0	1/1:2,0:1:2.04:6,2,0	0/1:7,0:1:0:0,0,0	1/1:20,0:18:38.76:299,39,0	1/1:19,0:18:53.64:429,54,0	1/1:24,0:23:58.31:503,58,0	1/1:9,0:7:8.92:63,9,0	1/1:20,0:18:50.28:398,50,0	0/0:15,0:14:23.44:0,23,454	0/0:24,0:22:31.98:0,32,611	1/1:29,0:26:71.61:616,72,0	1/1:23,1:23:59.49:471,59,0	1/1:22,1:21:11.68:154,12,0	1/1:10,0:9:17.83:124,18,0
chr10	36006942	.	CTA	C	430.30	PASS	AB=0.904;AC=10;AF=0.179;AN=56;BaseQRankSum=7.013;DP=647;FS=1.824;HRun=0;HaplotypeScore=172.8146;InbreedingCoeff=0.5902;MQ=56.87;MQ0=17;MQRankSum=-6.147;QD=3.10;ReadPosRankSum=-1.791;VQSLOD=2.7433;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:13,8:21:8.27:92,8,0	0/0:7,0:7:20.81:0,21,322	0/0:11,0:9:18.02:0,18,246	0/0:13,0:9:21.05:0,21,291	1/1:10,5:16:3:25,3,0	0/0:24,0:21:39.41:0,39,564	0/0:15,0:15:21:0,21,345	0/0:34,0:33:84.26:0,84,1216	1/1:9,8:24:15.03:171,15,0	0/1:30,0:26:99:103,0,921	0/0:28,0:26:63.21:0,63,982	0/0:22,0:22:60.19:0,60,972	0/0:24,0:23:42.14:0,42,683	0/0:21,0:21:39.13:0,39,646	0/0:37,0:33:57.84:0,58,869	1/1:7,12:24:2.78:72,3,0	0/1:14,5:18:42.79:113,0,43	0/0:8,0:8:2.78:0,3,263	0/0:19,0:17:15.56:0,16,500	0/0:31,0:26:63.15:0,63,945	0/0:20,0:17:36.11:0,36,559	0/0:24,0:21:42.14:0,42,682	0/0:24,0:24:51.14:0,51,766	0/0:27,1:25:32.91:0,33,533	0/0:23,0:21:56.11:0,56,868	0/0:29,0:27:72.25:0,72,1201	0/0:31,0:26:64.10:0,64,1048	0/0:34,0:34:93.32:0,93,1510
chr10	36006944	.	A	ATC	832.81	PASS	AB=0.978;AC=14;AF=0.250;AN=56;BaseQRankSum=9.461;DP=687;FS=2.623;HRun=0;HaplotypeScore=192.1984;InbreedingCoeff=0.3487;MQ=54.36;MQ0=19;MQRankSum=-9.607;QD=3.95;ReadPosRankSum=-7.037;VQSLOD=0.5378;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:17:7.55:90,8,0	0/1:9,0:9:3.17:3,0,215	0/0:10,0:8:18.02:0,18,246	0/0:13,0:9:21.05:0,21,291	1/1:18,0:16:3:25,3,0	0/0:25,1:23:16.34:0,16,397	0/0:15,0:15:20.63:0,21,301	0/1:40,0:39:85.73:86,0,1089	1/1:22,0:21:15.04:225,15,0	0/1:28,5:29:99:286,0,542	0/0:27,2:28:63.09:0,63,937	0/0:26,0:26:16.16:0,16,556	0/0:24,1:24:37.30:0,37,464	0/0:23,0:23:40.30:0,40,502	0/0:32,6:34:42.24:0,42,715	1/1:22,0:22:4.84:93,5,0	0/1:19,0:16:33.62:129,0,34	0/1:9,0:8:15.79:16,0,251	0/1:21,0:18:41.19:41,0,411	0/0:30,3:28:56.22:0,56,835	0/0:21,0:17:36.09:0,36,478	0/0:25,4:26:44.46:0,44,584	0/0:24,1:25:51.13:0,51,682	0/0:30,0:28:30.39:0,30,445	0/0:27,1:26:33.21:0,33,589	0/0:31,2:31:36.68:0,37,865	0/0:30,5:30:36.03:0,36,725	0/0:35,0:35:92.76:0,93,1213
chr10	36006968	.	C	CTG	217.94	PASS	AB=0.867;AC=6;AF=0.120;AN=50;BaseQRankSum=7.187;DP=721;FS=2.073;HRun=0;HaplotypeScore=234.7127;InbreedingCoeff=0.5658;MQ=39.41;MQ0=33;MQRankSum=-4.464;QD=2.72;ReadPosRankSum=-3.423;VQSLOD=2.1785;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:19:5.75:55,6,0	0/0:18,0:16:11.97:0,12,348	./.	./.	./.	0/0:27,0:24:5.75:0,6,280	0/0:15,0:15:13.77:0,14,189	0/0:50,0:49:99:0,135,1796	1/1:14,7:19:11.99:171,12,0	0/0:37,0:32:89.28:0,89,1184	0/0:31,0:29:32.85:0,33,460	0/0:32,0:32:67.60:0,68,809	0/0:23,0:22:39.12:0,39,552	0/0:25,0:21:32.70:0,33,493	0/0:46,0:41:35.87:0,36,695	0/1:13,5:18:5.54:44,0,6	0/1:19,1:16:46.18:70,0,46	0/0:10,0:9:26.24:0,26,313	0/0:24,0:18:47.97:0,48,625	0/0:34,0:27:36:0,36,547	0/0:19,0:14:21.07:0,21,320	0/0:37,0:33:31.94:0,32,459	0/0:26,0:25:29.66:0,30,403	0/0:29,0:25:23.49:0,23,336	0/0:30,0:27:22.47:0,22,548	0/0:35,0:32:90.12:0,90,1306	0/0:40,0:31:81.23:0,81,1175	0/0:32,0:32:66.15:0,66,951
chr10	36006972	.	C	CTG	128.10	PASS	AB=0.870;AC=7;AF=0.140;AN=50;BaseQRankSum=7.044;DP=704;FS=3.816;HRun=0;HaplotypeScore=241.8033;InbreedingCoeff=0.5690;MQ=37.57;MQ0=34;MQRankSum=-4.531;QD=1.66;ReadPosRankSum=-3.750;VQSLOD=2.0190;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:17:0.69:3,1,0	0/0:18,0:16:11.96:0,12,328	./.	./.	./.	0/0:27,0:24:2.74:0,3,236	0/0:17,0:17:14.95:0,15,209	0/0:47,0:45:99:0,134,1788	1/1:18,1:18:9.50:109,9,0	0/0:37,0:32:87.26:0,87,1207	0/0:30,0:28:26.82:0,27,348	0/0:31,0:31:64.93:0,65,822	0/0:25,0:23:39.07:0,39,521	0/0:24,0:20:29.69:0,30,449	0/0:46,0:41:32.86:0,33,649	1/1:17,1:18:1.83:34,2,0	0/1:16,3:16:37.37:92,0,37	0/0:8,0:9:23.12:0,23,292	0/0:25,0:19:47.46:0,47,590	0/0:35,0:27:35.85:0,36,497	0/0:19,0:14:21.03:0,21,272	0/0:34,0:30:25.94:0,26,388	0/0:27,0:26:29.77:0,30,452	0/0:26,0:22:20.51:0,21,297	0/0:29,0:26:19.46:0,19,504	0/0:34,0:31:87.28:0,87,1294	0/0:41,0:32:81.24:0,81,1154	0/0:28,0:28:64.76:0,65,931
chr10	36008161	.	G	GCTGCTTCCCGCCCCCCCCCCGAAA	7747.54	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=7.542;DP=504;FS=6.749;HRun=0;HaplotypeScore=298.9531;InbreedingCoeff=0.9940;MQ=82.96;MQ0=0;MQRankSum=-11.010;QD=127.01;ReadPosRankSum=-4.454;VQSLOD=2.4763;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:23:48:2115,48,0	0/0:10,0:10:30.10:0,30,1643	0/0:14,0:14:33.11:0,33,1410	0/0:16,0:16:37.31:0,37,1286	1/1:8,0:8:15.52:252,16,0	0/0:15,0:15:42.14:0,42,2473	0/0:33,0:33:96.33:0,96,5313	0/0:20,0:20:54.18:0,54,2749	1/1:13,0:13:36.11:2111,36,0	0/0:27,0:27:78.27:0,78,4428	0/0:12,0:12:36.12:0,36,2134	0/0:31,0:31:93.32:0,93,5515	0/0:21,0:21:63.22:0,63,3918	0/0:34,0:34:99:0,99,6155	0/0:22,0:22:66.21:0,66,3693	1/1:5,0:9:21.07:1724,21,0	1/1:6,1:8:21.07:1546,21,0	0/0:19,0:19:54.19:0,54,2943	0/0:16,0:16:45.15:0,45,2638	0/0:12,0:12:30.10:0,30,1560	0/0:35,0:35:99:0,102,5773	0/0:12,0:12:36.12:0,36,2110	0/0:13,0:13:39.09:0,39,2136	0/0:19,0:19:54.19:0,54,2869	0/0:15,0:15:39.13:0,39,2427	0/0:28,0:28:81.28:0,81,4687	0/0:10,0:10:30.10:0,30,1761	0/0:9,0:9:27.09:0,27,1781
chr10	36009249	.	GGT	G	269.79	PASS	AB=0.969;AC=9;AF=0.173;AN=52;BaseQRankSum=-0.512;DP=595;FS=0.000;HRun=0;HaplotypeScore=133.8401;InbreedingCoeff=0.0115;MQ=56.89;MQ0=18;MQRankSum=0.873;QD=1.72;ReadPosRankSum=0.243;VQSLOD=2.3146;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:22,6:25:19.14:256,19,0	0/0:10,0:8:6.41:0,6,57	./.	./.	0/0:27,0:28:11.44:0,11,110	0/1:11,0:11:30.82:31,0,113	0/0:24,0:24:10.29:0,10,71	0/0:27,0:24:7.22:0,7,50	0/0:19,0:25:18.12:0,18,179	0/0:19,0:17:26.81:0,27,237	0/0:14,0:14:2.88:0,3,15	0/1:19,4:23:72.77:73,0,211	0/1:19,0:18:3.67:4,0,141	0/1:16,0:15:2.79:3,0,66	0/0:28,0:27:17.84:0,18,189	0/1:15,0:18:1.85:2,0,32	0/1:25,0:26:14.67:15,0,102	0/0:21,0:21:12.10:0,12,80	0/0:25,0:21:8.83:0,9,64	0/0:19,0:19:1.09:0,1,55	0/0:18,0:17:9:0,9,87	0/0:12,0:12:19.77:0,20,167	0/1:12,1:13:12.24:12,0,213	0/0:32,1:33:1.93:0,2,615	0/0:16,0:16:9.81:0,10,82	0/0:27,0:25:30.92:0,31,244	0/0:24,0:21:35.93:0,36,423	0/0:11,0:9:16.25:0,16,165
chr10	36009286	.	GTC	G	471.26	PASS	AB=0.985;AC=14;AF=0.250;AN=56;BaseQRankSum=-1.049;DP=595;FS=4.820;HRun=0;HaplotypeScore=187.8436;InbreedingCoeff=-0.1713;MQ=40.74;MQ0=22;MQRankSum=-0.369;QD=1.58;ReadPosRankSum=-2.943;VQSLOD=2.1783;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:42,0:39:36.63:37,0,325	0/1:8,0:6:16.82:17,0,25	0/0:5,0:3:8.96:0,9,75	0/0:11,0:4:5.80:0,6,32	0/1:25,1:26:5.64:41,0,6	0/1:19,1:18:44.01:44,0,174	0/1:21,0:20:0.15:0,0,98	0/0:29,0:15:18.71:0,19,237	0/1:30,0:30:54.01:60,0,54	0/0:28,1:25:44.83:0,45,367	0/0:19,0:19:18.85:0,19,146	0/0:24,0:24:20.34:0,20,402	0/1:17,1:17:55.83:56,0,127	0/0:15,0:14:25.58:0,26,162	0/0:23,1:23:15.95:0,16,214	1/1:20,1:20:2.68:100,3,0	0/1:24,1:24:16:140,0,16	0/1:17,0:16:14.62:15,0,127	0/0:16,0:13:9.54:0,10,160	0/1:21,0:20:36.70:37,0,89	0/0:24,0:23:2.83:0,3,15	0/0:13,0:13:8.70:0,9,69	0/0:13,0:12:19.32:0,19,350	0/0:43,0:42:97.05:0,97,1196	0/1:16,0:16:8.23:8,0,95	0/0:21,0:19:12.11:0,12,250	0/1:33,0:28:65.25:65,0,285	0/0:10,0:9:15.17:0,15,113
chr10	36009330	.	G	GTGTC	22302.99	PASS	AB=0.667;AC=45;AF=0.804;AN=56;BaseQRankSum=-1.231;DP=645;FS=1.231;HRun=0;HaplotypeScore=155.7589;InbreedingCoeff=0.8790;MQ=55.92;MQ0=2;MQRankSum=-10.248;QD=46.76;ReadPosRankSum=-0.614;VQSLOD=4.9155;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,38:44:93.25:2272,93,0	1/1:0,7:7:15.05:395,15,0	0/0:33,0:25:57.12:0,57,971	0/0:43,0:33:73.57:0,74,1194	1/1:4,10:14:14.71:185,15,0	1/1:3,18:23:42.13:925,42,0	1/1:3,20:23:54.18:1279,54,0	1/1:8,20:31:78.15:1684,78,0	1/1:4,17:23:39.13:960,39,0	1/1:5,24:29:75.15:1763,75,0	1/1:4,15:19:30.06:538,30,0	0/0:26,0:26:72.17:0,72,1233	1/1:2,9:12:21.54:538,22,0	0/1:8,8:16:25.08:599,0,25	1/1:0,22:22:54.18:1212,54,0	1/1:5,14:22:35.68:858,36,0	1/1:6,17:23:48.15:1185,48,0	1/1:2,14:17:29.74:936,30,0	1/1:3,11:15:36.04:794,36,0	1/1:2,15:17:41.34:854,41,0	1/1:3,29:33:66.18:1334,66,0	1/1:6,9:15:24.08:465,24,0	0/0:15,0:15:39.11:0,39,658	0/0:51,0:51:99:0,138,2343	1/1:1,17:19:39.11:888,39,0	1/1:3,12:16:36.02:814,36,0	1/1:2,15:18:45.14:1034,45,0	1/1:2,13:15:30.10:791,30,0
chr10	36009332	.	G	GTC	4423.39	PASS	AB=1.000;AC=33;AF=0.589;AN=56;BaseQRankSum=7.265;DP=641;FS=1.095;HRun=0;HaplotypeScore=198.6134;InbreedingCoeff=0.1484;MQ=56.19;MQ0=2;MQRankSum=-6.752;QD=9.68;ReadPosRankSum=8.982;VQSLOD=4.0164;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:44,0:44:30.04:528,30,0	1/1:7,0:7:14.88:106,15,0	0/0:34,0:26:63.19:0,63,848	0/0:41,1:34:58:0,58,897	0/0:13,1:14:14.99:0,15,73	0/1:22,0:22:23.76:170,0,24	1/1:25,0:24:5.32:253,5,0	0/1:28,0:28:30.73:253,0,31	1/1:23,1:24:21.48:225,21,0	0/1:30,0:30:3.12:349,0,3	0/1:17,0:17:51.92:52,0,84	0/0:26,0:26:72.21:0,72,1001	1/1:11,1:12:23.81:184,24,0	0/1:15,0:15:31.14:122,0,31	0/1:23,0:23:24.48:216,0,24	1/1:22,0:22:16.99:179,17,0	1/1:22,1:23:45.11:300,45,0	1/1:17,0:17:3.72:214,4,0	0/1:14,0:14:31.11:151,0,31	0/1:19,0:19:50.55:126,0,51	0/1:33,0:33:68.47:197,0,68	0/1:14,0:14:37.73:61,0,38	0/0:15,0:15:39.11:0,39,523	0/0:51,0:51:99:0,141,1921	0/1:18,0:18:10.90:173,0,11	1/1:16,0:16:6.55:171,7,0	1/1:18,0:17:7.24:203,7,0	1/1:16,0:15:10.81:191,11,0
chr10	36009586	.	AT	A	623.10	PASS	AB=0.829;AC=17;AF=0.304;AN=56;BaseQRankSum=5.448;DP=437;FS=0.000;HRun=15;HaplotypeScore=66.0649;InbreedingCoeff=0.1010;MQ=91.52;MQ0=0;MQRankSum=0.548;QD=3.01;ReadPosRankSum=2.468;VQSLOD=-0.5970;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:31:37.09:0,37,191	0/0:5,0:5:6:0,6,53	0/1:39,1:25:15.35:15,0,45	0/0:25,1:20:7.87:0,8,68	0/1:6,4:11:3.16:50,0,3	0/0:12,0:13:14.11:0,14,146	0/1:11,3:14:11.54:12,0,158	0/0:23,1:28:34.17:0,34,382	1/1:1,13:14:24.95:201,25,0	0/1:16,4:20:18.19:18,0,209	0/0:7,0:7:15:0,15,132	0/0:9,0:9:8.98:0,9,75	0/0:7,0:11:3.69:0,4,101	0/1:8,4:12:17.55:18,0,107	0/0:12,1:13:19.73:0,20,297	1/1:8,12:20:23.13:143,23,0	1/1:0,12:12:32.52:211,33,0	0/0:21,1:22:5.67:0,6,266	0/1:12,3:17:60.66:61,0,118	0/1:7,1:8:4.40:4,0,77	0/0:15,0:17:26.21:0,26,207	0/1:8,1:9:1.26:1,0,114	0/1:9,2:11:14.03:14,0,129	0/1:5,2:7:10.27:10,0,44	0/1:8,3:11:33.80:34,0,104	0/0:20,0:20:32.95:0,33,283	0/0:14,0:17:41.68:0,42,345	0/0:9,0:9:23.98:0,24,207
chr10	36009788	.	C	CAT	502.48	PASS	AC=8;AF=0.148;AN=54;BaseQRankSum=5.832;DP=265;FS=3.902;HRun=0;HaplotypeScore=43.1924;InbreedingCoeff=0.7161;MQ=75.86;MQ0=1;MQRankSum=-2.742;QD=20.10;ReadPosRankSum=-2.551;VQSLOD=2.7793;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:45.10:0,45,559	0/0:11,0:11:30.10:0,30,384	0/0:14,0:8:4.92:0,5,90	0/0:16,0:9:9.37:0,9,82	1/1:3,5:8:12.04:200,12,0	0/0:17,0:17:45.15:0,45,578	0/0:5,0:5:15.03:0,15,178	0/0:23,0:23:48.16:0,48,617	1/1:0,1:1:3.01:51,3,0	0/0:12,0:12:24.08:0,24,309	0/0:10,0:10:27.09:0,27,347	./.	0/0:5,0:5:9.03:0,9,116	0/0:4,0:4:12.04:0,12,154	0/0:3,0:3:9.03:0,9,116	1/1:0,3:3:9.03:151,9,0	1/1:6,7:11:14.72:239,15,0	0/0:14,0:14:33.11:0,33,424	0/0:19,0:19:33.11:0,33,425	0/0:7,0:7:21.04:0,21,242	0/0:4,0:4:12.04:0,12,154	0/0:2,0:2:6.02:0,6,77	0/0:1,0:1:3.01:0,3,39	0/0:4,0:4:3.01:0,3,39	0/0:13,0:13:24.06:0,24,293	0/0:9,0:9:27.09:0,27,347	0/0:14,0:14:42.14:0,42,540	0/0:12,0:12:33.11:0,33,424
chr10	36009807	.	C	CATAT	742.95	PASS	AB=0.990;AC=10;AF=0.179;AN=56;BaseQRankSum=5.932;DP=312;FS=1.038;HRun=0;HaplotypeScore=59.8331;InbreedingCoeff=0.5117;MQ=80.67;MQ0=7;MQRankSum=-5.316;QD=7.08;ReadPosRankSum=-0.974;VQSLOD=1.8951;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:33.09:0,33,548	0/0:11,0:11:27.09:0,27,475	0/1:30,0:14:13.54:14,0,62	0/1:49,0:20:37.20:37,0,143	1/1:3,3:6:5.84:153,6,0	0/0:17,0:17:48.11:0,48,759	0/0:7,0:7:21.05:0,21,334	0/0:29,0:29:66.20:0,66,1082	1/1:1,1:2:3.01:77,3,0	0/0:9,0:9:27.09:0,27,476	0/0:8,0:8:21.07:0,21,371	0/0:1,0:1:3.01:0,3,53	0/0:4,0:4:12.02:0,12,183	0/0:5,0:5:12.03:0,12,184	0/0:3,0:3:9.03:0,9,159	1/1:1,1:2:6.02:153,6,0	1/1:7,7:12:18.06:454,18,0	0/0:16,0:16:39.10:0,39,614	0/0:14,0:13:33.09:0,33,528	0/0:8,0:8:21.05:0,21,341	0/0:5,0:5:12.04:0,12,212	0/0:2,0:2:6:0,6,77	0/0:1,0:1:3.01:0,3,53	0/0:2,0:2:3.01:0,3,53	0/0:11,0:11:30.10:0,30,522	0/0:9,0:9:27.09:0,27,477	0/0:16,0:16:39.12:0,39,659	0/0:13,0:13:36.12:0,36,633
chr10	36009822	.	CAT	C	136.16	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=5.315;DP=334;FS=2.674;HRun=0;HaplotypeScore=57.8966;InbreedingCoeff=0.7712;MQ=82.58;MQ0=7;MQRankSum=-4.778;QD=5.67;ReadPosRankSum=-1.645;VQSLOD=2.5195;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:36.11:0,36,559	0/0:11,0:11:30.07:0,30,470	0/0:30,0:14:17.89:0,18,96	0/0:58,0:24:17.71:0,18,189	1/1:0,4:4:6.41:42,6,0	0/0:17,0:17:51.14:0,51,804	0/0:9,0:9:21.07:0,21,358	0/0:36,0:36:99:0,105,1719	1/1:0,3:3:8.95:74,9,0	0/0:11,0:11:30.10:0,30,478	0/0:8,0:8:18.06:0,18,294	0/0:2,0:2:6.02:0,6,104	0/0:4,0:4:12.04:0,12,208	0/0:6,0:6:18.04:0,18,283	0/0:6,0:6:18.05:0,18,279	1/1:0,3:3:6:58,6,0	1/1:8,6:12:11.95:99,12,0	0/0:15,0:15:42.14:0,42,720	0/0:10,0:9:24.08:0,24,416	0/0:10,0:10:27.09:0,27,465	0/0:8,0:8:24.08:0,24,410	0/0:2,0:2:6.02:0,6,104	0/0:2,0:2:6.02:0,6,104	0/0:2,0:2:3.01:0,3,52	0/0:13,0:13:39.13:0,39,669	0/0:11,0:11:24.08:0,24,394	0/0:12,0:12:33.11:0,33,563	0/0:12,0:12:36.12:0,36,611
chr10	36009839	.	C	CAT	487.73	PASS	AB=0.982;AC=9;AF=0.161;AN=56;BaseQRankSum=4.786;DP=388;FS=2.280;HRun=0;HaplotypeScore=60.9610;InbreedingCoeff=0.8099;MQ=80.32;MQ0=6;MQRankSum=-3.776;QD=5.54;ReadPosRankSum=-1.640;VQSLOD=2.3729;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:1,0:19:28.41:0,28,139	0/0:7,0:7:18.06:0,18,232	0/0:27,0:17:5.05:0,5,104	0/1:55,0:22:3.03:3,0,43	1/1:1,5:6:8.92:129,9,0	0/0:21,0:21:54.17:0,54,681	0/0:9,0:9:27.07:0,27,333	0/0:40,0:40:87.27:0,87,1106	1/1:0,4:4:12.04:153,12,0	0/0:15,0:15:45.14:0,45,568	0/0:9,0:9:24.08:0,24,307	0/0:5,0:5:15.04:0,15,179	0/0:6,0:6:12.04:0,12,154	0/0:8,0:8:24.08:0,24,308	0/0:8,0:8:21.07:0,21,270	1/1:0,5:5:9.03:119,9,0	1/1:3,14:16:18.05:231,18,0	0/0:17,0:17:44.97:0,45,574	0/0:14,0:14:42.12:0,42,519	0/0:12,0:12:36.10:0,36,449	0/0:13,0:13:30.03:0,30,353	0/0:9,0:9:24.05:0,24,279	0/0:6,0:6:18.04:0,18,215	0/0:6,0:6:12.02:0,12,139	0/0:16,0:16:48.14:0,48,603	0/0:11,0:11:30.10:0,30,382	0/0:10,0:10:30.07:0,30,358	0/0:11,0:11:30.10:0,30,386
chr10	36011065	.	ACTCACAGTGATC	A	5992.12	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=10.044;DP=685;FS=0.000;HRun=0;HaplotypeScore=232.2125;InbreedingCoeff=0.9990;MQ=59.38;MQ0=1;MQRankSum=-10.994;QD=80.97;ReadPosRankSum=1.925;VQSLOD=4.5340;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,135,7832	0/0:10,0:10:30.10:0,30,1847	0/0:19,0:15:45.15:0,45,2641	0/0:31,0:26:69.24:0,69,3554	1/1:5,7:12:24.08:740,24,0	0/0:23,0:23:60.21:0,60,3549	0/0:30,0:30:87.30:0,87,5045	0/0:33,0:32:87.29:0,87,4819	1/1:5,19:24:60.21:2210,60,0	0/0:27,0:27:78.26:0,78,4488	0/0:15,0:15:39.13:0,39,2219	0/0:23,0:23:69.24:0,69,3903	0/0:33,0:33:96.33:0,96,5821	0/0:33,0:33:90.31:0,90,5418	0/0:38,0:38:99:0,114,6767	1/1:9,10:19:36.12:1247,36,0	1/1:3,16:19:48.16:1795,48,0	0/0:31,0:31:90.31:0,90,5085	0/0:25,0:24:66.23:0,66,3662	0/0:20,0:20:51.17:0,51,3018	0/0:21,0:21:54.19:0,54,3099	0/0:13,0:13:39.13:0,39,2121	0/0:11,0:11:29.90:0,30,1835	0/0:38,0:38:99:0,112,6466	0/0:14,0:14:39.13:0,39,2404	0/0:23,0:23:63.22:0,63,3593	0/0:21,0:21:54.19:0,54,3205	0/0:28,0:28:84.29:0,84,4494
chr10	36011151	.	C	CA	1699.58	PASS	AB=0.990;AC=7;AF=0.125;AN=56;BaseQRankSum=-0.446;DP=756;FS=76.660;HRun=1;HaplotypeScore=162.9710;InbreedingCoeff=0.5015;MQ=82.44;MQ0=0;MQRankSum=-2.646;QD=10.56;ReadPosRankSum=1.133;VQSLOD=-0.1294;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,45:46:99:1751,124,0	0/0:8,0:8:15.50:0,15,56	0/0:31,0:31:93.28:0,93,1268	0/0:25,0:25:72:0,72,940	0/0:24,0:24:0.45:0,0,53	0/0:23,0:23:20.41:0,20,75	0/0:37,0:37:35.37:0,35,136	0/0:40,0:40:56.87:0,57,258	0/1:23,0:23:5.32:5,0,41	0/0:32,0:32:48.34:0,48,269	0/0:16,0:16:22.39:0,22,136	0/0:29,0:29:81.26:0,81,1110	0/0:27,0:27:33.68:0,34,166	0/0:37,0:37:35.55:0,36,196	0/0:33,0:33:63.24:0,63,230	0/1:32,0:32:6.22:6,0,150	1/1:28,0:28:11.73:59,12,0	0/0:26,0:26:33.51:0,34,139	0/0:23,0:23:36.37:0,36,170	0/1:31,0:32:5.29:5,0,160	0/0:20,0:20:19.85:0,20,84	0/0:18,0:18:20.94:0,21,87	0/0:22,0:22:60.20:0,60,829	0/0:29,0:29:87.27:0,87,1196	0/0:18,0:18:20.50:0,21,154	0/0:28,0:28:28.80:0,29,118	0/0:41,0:41:19.94:0,20,125	0/0:8,0:8:13.89:0,14,46
chr10	36011154	.	G	GA	25429.39	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-8.439;DP=782;FS=2.507;HRun=1;HaplotypeScore=83.4795;InbreedingCoeff=0.9990;MQ=81.59;MQ0=0;MQRankSum=-7.544;QD=39.67;ReadPosRankSum=3.225;VQSLOD=5.5354;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:47,0:47:99:1806,126,0	1/1:0,8:8:24.08:360,24,0	0/0:32,0:31:90.29:0,90,1168	0/0:24,0:24:48.69:0,49,800	1/1:0,24:24:69.19:1007,69,0	1/1:0,24:24:60.20:899,60,0	1/1:3,38:41:99:1483,99,0	1/1:0,44:44:99:1756,123,0	1/1:1,23:24:66.22:988,66,0	1/1:1,31:32:90.28:1307,90,0	1/1:1,17:18:45.08:647,45,0	0/0:29,0:29:78.23:0,78,985	1/1:1,27:28:75.25:1123,75,0	1/1:0,39:39:99:1483,99,0	1/1:0,36:36:96.33:1439,96,0	1/1:2,29:31:81.23:1186,81,0	1/1:0,29:29:75.25:1118,75,0	1/1:0,25:25:72.24:1079,72,0	1/1:1,24:25:75.22:1058,75,0	1/1:4,29:34:87.29:1281,87,0	1/1:0,18:18:45.15:674,45,0	1/1:0,18:18:51.13:739,51,0	0/0:25,0:25:66.17:0,66,814	0/0:31,0:31:90.24:0,90,1134	1/1:2,16:18:39.13:584,39,0	1/1:1,28:29:87.27:1279,87,0	1/1:0,41:41:99:1797,120,0	1/1:0,8:8:24.06:338,24,0
chr10	36012400	.	A	AC	4340.54	PASS	AB=0.758;AC=20;AF=0.357;AN=56;BaseQRankSum=-1.315;DP=563;FS=15.315;HRun=1;HaplotypeScore=162.2954;InbreedingCoeff=-0.4101;MQ=63.51;MQ0=12;MQRankSum=-3.480;QD=14.05;ReadPosRankSum=-1.779;VQSLOD=2.7772;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:8,5:14:99:155,0,216	1/1:1,3:4:9.03:143,9,0	0/0:54,0:34:59.66:0,60,1051	0/0:64,0:27:38.39:0,38,596	0/0:15,0:16:19.88:0,20,257	0/1:9,5:16:99:289,0,184	0/1:9,4:15:99:131,0,260	0/1:13,9:22:99:339,0,472	0/0:18,0:22:55.94:0,56,667	0/1:9,13:26:99:538,0,323	0/1:11,4:17:99:106,0,198	0/0:14,0:14:42.14:0,42,585	0/1:4,9:14:54.41:325,0,54	0/1:13,5:19:99:265,0,254	0/1:5,13:18:71.79:591,0,72	0/0:26,0:27:76.56:0,77,998	0/0:18,0:19:40.68:0,41,622	0/1:6,2:7:77.38:77,0,117	0/1:10,6:15:99:186,0,231	0/1:7,2:9:69.25:69,0,227	0/1:7,2:8:76.61:77,0,127	0/1:7,1:10:23.44:23,0,234	0/0:14,0:14:40.69:0,41,549	0/0:22,0:22:66.19:0,66,887	0/1:17,4:22:99:189,0,374	0/1:17,10:27:99:430,0,397	0/1:9,12:21:99:394,0,213	0/1:11,3:13:12.75:13,0,328
chr10	36012410	.	GGC	G	1873.41	PASS	AB=0.955;AC=24;AF=0.429;AN=56;BaseQRankSum=7.829;DP=544;FS=52.092;HRun=0;HaplotypeScore=170.5755;InbreedingCoeff=-0.5847;MQ=62.44;MQ0=11;MQRankSum=-4.666;QD=5.05;ReadPosRankSum=-3.794;VQSLOD=0.4996;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:11,0:11:30.32:78,0,30	1/1:3,0:2:3:25,3,0	0/0:55,0:27:29.02:0,29,715	0/0:67,1:25:3.64:0,4,276	0/1:19,1:20:1.01:1,0,274	0/1:17,0:17:48.75:168,0,49	0/1:12,1:13:86.87:87,0,137	0/1:15,0:15:51.82:52,0,356	0/1:20,3:22:27.25:27,0,370	0/1:13,4:17:99:137,0,357	0/1:16,3:19:74.90:127,0,75	0/0:13,0:13:39.13:0,39,769	0/1:10,0:10:52.44:101,0,52	0/1:18,0:17:6.64:86,0,7	0/1:14,0:13:10.05:174,0,10	0/1:28,1:28:33.79:34,0,672	0/1:20,2:22:24.80:25,0,397	0/1:7,0:7:14.87:64,0,15	0/1:10,0:10:4.94:5,0,343	0/1:13,0:13:37.03:37,0,115	0/1:8,0:7:17.54:18,0,31	0/1:13,1:14:77.07:165,0,77	0/0:17,0:16:39.19:0,39,674	0/0:19,0:19:54.03:0,54,922	0/1:24,2:24:99:144,0,149	0/1:21,1:20:99:137,0,452	0/1:20,0:20:99:193,0,199	0/1:17,3:18:99:143,0,336
chr10	36012413	.	A	AAG	766.27	PASS	AB=0.982;AC=15;AF=0.268;AN=56;BaseQRankSum=8.183;DP=578;FS=9.950;HRun=0;HaplotypeScore=197.1891;InbreedingCoeff=-0.0964;MQ=62.33;MQ0=12;MQRankSum=-6.567;QD=2.79;ReadPosRankSum=-4.838;VQSLOD=0.2028;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:12,0:12:4.68:72,5,0	0/0:4,0:3:2.95:0,3,40	0/0:54,0:25:38.15:0,38,676	0/1:72,0:25:2.36:2,0,335	0/0:20,0:20:21:0,21,288	0/1:19,0:19:77.11:89,0,77	0/0:13,0:13:4.78:0,5,169	0/0:22,0:22:25.88:0,26,368	0/0:24,0:23:27.93:0,28,342	0/1:20,0:20:87.24:87,0,404	0/1:22,0:22:17.80:18,0,143	0/0:12,0:12:36.12:0,36,585	0/1:9,1:10:67.58:68,0,72	0/1:19,0:18:78.64:79,0,104	0/1:13,1:13:19.79:193,0,20	0/0:29,0:28:44.88:0,45,553	0/0:22,0:22:26.17:0,26,286	0/0:8,0:7:6.63:0,7,100	0/0:13,1:14:29.51:0,30,375	0/1:15,0:15:60.46:60,0,61	1/1:8,0:7:3.01:36,3,0	0/1:16,0:16:12.06:12,0,220	0/0:15,0:14:39.09:0,39,552	0/0:19,0:19:53.87:0,54,811	0/1:26,1:25:65.57:91,0,66	0/0:22,0:20:22.37:0,22,591	0/1:21,0:21:99:113,0,267	0/0:25,0:23:39.16:0,39,492
chr10	36012430	.	GA	G	343.61	PASS	AB=0.939;AC=4;AF=0.071;AN=56;BaseQRankSum=4.492;DP=592;FS=0.853;HRun=1;HaplotypeScore=155.9708;InbreedingCoeff=0.0162;MQ=63.64;MQ0=10;MQRankSum=-2.896;QD=3.54;ReadPosRankSum=0.105;VQSLOD=0.0121;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:7.28:0,7,104	0/0:11,0:10:23.62:0,24,306	0/0:40,1:18:42.22:0,42,440	0/0:58,0:18:29.88:0,30,425	0/1:21,0:21:26.04:26,0,32	0/0:21,0:21:34.90:0,35,452	0/0:12,0:12:24.08:0,24,332	0/0:35,0:35:99:0,100,1308	0/1:27,0:26:77.21:77,0,199	0/0:20,0:20:53.59:0,54,686	0/0:20,0:20:20.31:0,20,271	0/0:15,0:15:45.12:0,45,653	0/0:12,0:12:23.80:0,24,293	0/0:19,0:18:14.90:0,15,198	0/0:12,0:11:2.32:0,2,47	0/1:24,0:23:79.31:79,0,223	0/1:17,8:25:99:269,0,218	0/0:7,0:6:15.03:0,15,222	0/0:15,0:15:39.13:0,39,524	0/0:25,0:25:48.14:0,48,613	0/0:8,0:7:0:0,0,0	0/0:15,0:15:21.07:0,21,297	0/0:14,0:13:31.65:0,32,453	0/0:19,0:19:49.70:0,50,699	0/0:32,0:30:36.07:0,36,478	0/0:23,0:21:57.19:0,57,860	0/0:23,0:23:49.71:0,50,683	0/0:25,0:23:63.19:0,63,917
chr10	36012431	.	A	AG	507.24	PASS	AB=0.701;AC=4;AF=0.074;AN=54;BaseQRankSum=4.708;DP=597;FS=0.847;HRun=1;HaplotypeScore=157.1582;InbreedingCoeff=-0.0875;MQ=62.80;MQ0=9;MQRankSum=-2.885;QD=4.88;ReadPosRankSum=1.006;VQSLOD=0.3402;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:6.43:0,6,79	0/0:11,0:10:24.46:0,24,284	0/0:38,0:15:32.28:0,32,348	0/0:56,0:18:38.09:0,38,381	0/1:1,1:26:18.78:38,0,19	0/0:21,0:21:33.68:0,34,378	0/0:14,0:14:24.03:0,24,264	0/0:35,0:35:98.19:0,98,1136	0/1:14,13:26:84.92:85,0,130	0/0:21,0:21:52.38:0,52,575	0/0:20,0:20:18.17:0,18,186	0/0:14,0:14:42.12:0,42,530	0/0:12,0:12:23.79:0,24,268	0/0:19,0:18:14.89:0,15,167	0/0:11,0:10:3.01:0,3,37	0/1:18,7:24:99:148,0,127	0/1:21,5:26:99:345,0,143	0/0:7,0:6:15.02:0,15,163	0/0:15,0:15:39.10:0,39,472	0/0:25,0:25:48.11:0,48,581	./.	0/0:14,0:14:21.03:0,21,231	0/0:15,0:14:36.54:0,37,413	0/0:18,0:18:47.95:0,48,592	0/0:33,0:31:35.50:0,36,389	0/0:25,0:23:57.12:0,57,681	0/0:24,0:24:49.03:0,49,584	0/0:24,0:22:62.85:0,63,698
chr10	36012723	.	G	GGT	6704	PASS	AB=0.733;AC=31;AF=0.554;AN=56;BaseQRankSum=-6.415;DP=739;FS=6.654;HRun=0;HaplotypeScore=120.9634;InbreedingCoeff=-0.0571;MQ=67.89;MQ0=18;MQRankSum=-1.195;QD=11.95;ReadPosRankSum=0.359;VQSLOD=4.1723;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:41:28.41:0,28,140	0/1:4,1:7:24.66:57,0,25	0/0:48,0:24:1.84:0,2,29	0/1:48,0:28:2.24:2,0,96	0/1:12,0:11:0:0,0,0	0/1:13,2:15:19.34:38,0,19	0/1:15,16:37:33.29:535,0,33	1/1:20,4:24:13.82:190,14,0	1/1:17,0:16:20.54:149,21,0	0/1:16,11:30:97.57:455,0,98	0/1:9,12:21:40.10:292,0,40	0/0:26,0:33:68.51:0,69,685	0/1:12,15:29:31.05:420,0,31	0/1:14,12:28:7.05:288,0,7	1/1:6,16:24:3.36:618,3,0	1/1:21,0:21:23.67:193,24,0	1/1:22,0:22:16.62:124,17,0	0/1:11,16:27:50.17:588,0,50	1/1:12,2:14:9.02:118,9,0	0/1:10,10:22:17.66:325,0,18	0/1:25,17:46:29.83:588,0,30	0/1:10,8:18:83.33:119,0,83	0/0:17,0:19:26.74:0,27,262	0/0:36,0:36:63.07:0,63,689	0/1:11,6:17:21.61:125,0,22	0/1:20,11:34:45.52:452,0,46	1/1:14,11:26:31.01:618,31,0	1/1:9,12:20:27.09:410,27,0
chr10	36012755	.	T	TGTGTGTGTGC	4034.03	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=2.020;DP=752;FS=6.219;HRun=0;HaplotypeScore=223.7160;InbreedingCoeff=0.6285;MQ=58.40;MQ0=21;MQRankSum=-6.064;QD=26.19;ReadPosRankSum=0.133;VQSLOD=2.2150;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:68.87:0,69,1053	0/0:11,0:11:15.92:0,16,237	0/0:54,0:19:53.84:0,54,524	0/0:59,0:24:57.55:0,58,780	1/1:7,0:14:5.31:264,5,0	0/0:12,0:12:26.99:0,27,254	0/0:36,0:37:77.88:0,78,1051	0/1:17,0:17:61.10:61,0,309	1/1:8,1:25:30.10:1093,30,0	0/0:28,0:28:56.15:0,56,1085	0/0:21,0:21:35.99:0,36,549	0/0:33,0:33:90.20:0,90,2250	0/1:27,0:27:32.32:32,0,680	0/0:28,0:28:62.70:0,63,692	0/0:31,0:31:78.53:0,79,1004	1/1:6,16:31:29.88:1445,30,0	1/1:23,1:24:44.66:1122,45,0	0/0:25,0:25:69.13:0,69,1082	0/1:14,0:14:15.43:15,0,275	0/0:22,0:22:32.63:0,33,610	0/0:41,0:41:93.08:0,93,1164	0/0:21,0:21:46.57:0,47,604	0/0:13,0:13:36.08:0,36,899	0/0:38,0:37:93.16:0,93,2313	0/0:20,0:19:33.01:0,33,399	0/0:32,0:32:32.18:0,32,967	0/0:27,0:27:78.06:0,78,930	0/0:11,0:11:27.09:0,27,374
chr10	36013106	.	AG	A	16696.63	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=13.271;DP=723;FS=0.601;HRun=2;HaplotypeScore=84.5336;InbreedingCoeff=0.9999;MQ=81.21;MQ0=0;MQRankSum=-5.439;QD=34.86;ReadPosRankSum=3.013;VQSLOD=5.2591;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,53:54:99:1908,147,0	1/1:0,11:11:33.11:428,33,0	0/0:22,0:22:66.22:0,66,980	0/0:29,0:29:65.56:0,66,999	0/0:22,0:21:57.16:0,57,783	1/1:1,23:24:66.21:848,66,0	1/1:1,22:23:60.19:779,60,0	1/1:0,27:27:81.24:1023,81,0	0/0:29,0:29:84.28:0,84,1257	1/1:0,31:31:90.27:1141,90,0	1/1:0,19:19:45.15:583,45,0	0/0:38,0:38:99:0,114,1667	1/1:2,25:27:75.24:967,75,0	1/1:0,23:23:51.17:662,51,0	1/1:0,30:30:75.24:974,75,0	0/0:29,0:29:87.28:0,87,1284	0/0:38,0:38:99:0,114,1679	1/1:0,20:20:60.20:779,60,0	1/1:0,20:20:57.17:725,57,0	1/1:1,29:30:75.24:973,75,0	1/1:0,29:29:78.25:1013,78,0	1/1:1,19:20:42.14:545,42,0	0/0:17,0:17:48.12:0,48,641	0/0:20,0:20:57.15:0,57,828	1/1:0,18:18:48.16:623,48,0	1/1:0,31:31:93.30:1206,93,0	1/1:0,21:21:54.18:701,54,0	1/1:0,21:21:63.20:818,63,0
chr10	36013907	.	G	GGCTAAGTAAACTGTC	80759.06	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=1.305;DP=726;FS=2.970;HRun=0;HaplotypeScore=305.5429;InbreedingCoeff=0.9993;MQ=85.82;MQ0=0;MQRankSum=-20.166;QD=163.48;ReadPosRankSum=1.683;VQSLOD=4.3323;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,16:34:84.29:5229,84,0	1/1:7,4:11:33.11:2108,33,0	0/0:40,0:40:99:0,108,4008	0/0:26,0:26:69.20:0,69,2587	0/0:14,0:14:39.13:0,39,1477	1/1:11,10:21:60.21:3556,60,0	1/1:24,12:36:99:7064,108,0	1/1:43,1:46:99:7909,135,0	0/0:25,0:25:72.23:0,72,3005	1/1:21,10:32:93.17:5240,93,0	1/1:13,4:20:45.15:2276,45,0	0/0:22,0:22:63.21:0,63,2555	1/1:20,15:37:99:6894,105,0	1/1:13,11:27:66.23:4528,66,0	1/1:24,13:37:96.33:5935,96,0	0/0:28,0:27:78.27:0,78,3399	0/0:30,0:30:90.29:0,90,3629	1/1:6,2:9:21.07:1420,21,0	1/1:19,6:26:69.24:3787,69,0	1/1:12,10:24:51.17:3534,51,0	1/1:12,3:19:36.12:2057,36,0	1/1:9,4:16:35.93:2190,36,0	0/0:21,0:21:57.18:0,57,2085	0/0:26,0:26:72.25:0,72,3018	1/1:14,9:23:69.24:3512,69,0	1/1:18,15:34:99:6402,99,0	1/1:20,9:30:84.29:4856,84,0	1/1:9,3:12:36.12:2261,36,0
chr10	36016547	.	A	AT	4764.81	PASS	AB=0.992;AC=12;AF=0.214;AN=56;BaseQRankSum=-5.703;DP=790;FS=52.761;HRun=0;HaplotypeScore=150.3263;InbreedingCoeff=0.5280;MQ=88.45;MQ0=0;MQRankSum=-4.260;QD=19.29;ReadPosRankSum=2.909;VQSLOD=1.7075;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:19.55:0,20,80	0/1:14,0:14:21.70:22,0,40	0/0:27,0:27:75.21:0,75,1001	0/0:28,0:28:78.21:0,78,996	1/1:0,31:31:86.13:1172,86,0	0/0:31,0:31:22.12:0,22,58	0/0:19,0:19:28.09:0,28,69	0/0:26,0:26:15.25:0,15,171	1/1:1,32:33:86.86:1192,87,0	0/0:33,0:33:24.69:0,25,134	0/0:19,0:19:12.77:0,13,53	0/0:26,0:26:78.26:0,78,1087	0/0:22,0:22:3.51:0,4,51	0/0:24,0:24:2.45:0,2,55	0/0:42,0:42:31.79:0,32,94	1/1:3,32:35:80.11:1113,80,0	1/1:4,32:36:89.87:1231,90,0	0/0:16,0:16:21.17:0,21,53	0/0:24,0:24:39.65:0,40,195	0/0:17,0:17:17.52:0,18,41	0/0:42,0:42:37.20:0,37,124	0/0:32,0:32:11.24:0,11,87	0/0:25,0:25:75.25:0,75,1048	0/0:26,0:26:75.22:0,75,1028	0/1:29,1:30:9.24:9,0,62	0/1:32,0:32:6.48:6,0,71	0/1:36,0:35:19.95:20,0,50	0/0:15,0:15:12.67:0,13,42
chr10	36016548	.	C	CG	25137.93	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-8.637;DP=787;FS=2.070;HRun=2;HaplotypeScore=80.8305;InbreedingCoeff=1.0000;MQ=88.97;MQ0=0;MQRankSum=-7.759;QD=38.44;ReadPosRankSum=4.140;VQSLOD=5.3980;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,46:48:99:1847,132,0	1/1:1,13:14:39.13:560,39,0	0/0:27,0:27:72.22:0,72,881	0/0:28,0:29:72.14:0,72,816	1/1:30,0:30:87.25:1202,87,0	1/1:0,32:32:84.28:1209,84,0	1/1:0,19:19:57.19:821,57,0	1/1:4,20:24:54.17:757,54,0	1/1:34,0:34:87.29:1221,87,0	1/1:0,34:34:96.25:1317,96,0	1/1:1,18:19:57.19:805,57,0	0/0:26,0:26:78.23:0,78,953	1/1:1,22:23:57.19:820,57,0	1/1:1,23:24:60.20:863,60,0	1/1:0,42:42:99:1725,120,0	1/1:33,0:33:83.92:1162,84,0	1/1:36,0:36:93.30:1291,93,0	1/1:1,15:16:45.15:648,45,0	1/1:2,20:22:60.17:824,60,0	1/1:0,18:18:51.13:711,51,0	1/1:3,39:43:99:1711,120,0	1/1:1,31:32:87.29:1241,87,0	0/0:25,0:25:75.24:0,75,929	0/0:26,0:26:75.24:0,75,928	1/1:2,28:30:78.26:1122,78,0	1/1:0,31:31:93.28:1297,93,0	1/1:2,33:34:96.32:1380,96,0	1/1:1,14:15:42.14:604,42,0
chr10	36017675	.	T	TA	1073.94	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-7.142;DP=634;FS=0.000;HRun=6;HaplotypeScore=60.4045;InbreedingCoeff=0.9968;MQ=70.69;MQ0=0;MQRankSum=-4.135;QD=29.03;ReadPosRankSum=1.658;VQSLOD=4.2398;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,32:37:93.30:1169,93,0	0/0:14,0:14:30.06:0,30,305	0/0:15,0:15:36.94:0,37,356	0/0:16,0:16:40.88:0,41,391	0/0:27,0:27:69.14:0,69,697	0/0:30,0:30:87.17:0,87,874	0/0:16,0:16:42.09:0,42,428	0/0:34,0:34:78.16:0,78,794	0/0:25,0:25:66.14:0,66,673	0/0:35,0:35:99:0,99,1004	0/0:21,0:21:57.11:0,57,575	0/0:22,0:22:60.13:0,60,612	0/0:21,0:21:57.13:0,57,581	0/0:19,0:19:40.66:0,41,507	0/0:30,0:30:90.19:0,90,911	0/0:13,0:13:33.07:0,33,337	0/0:13,0:13:39.09:0,39,398	0/0:10,0:10:24.05:0,24,243	0/0:30,0:30:78.16:0,78,790	0/0:32,0:32:93.19:0,93,940	0/0:12,0:12:36.05:0,36,357	0/0:22,0:22:60.08:0,60,594	0/0:21,0:21:60.13:0,60,612	0/0:19,0:19:54.12:0,54,551	0/0:21,0:21:63.14:0,63,643	0/0:26,0:26:72.16:0,72,735	0/0:28,0:28:66:0,66,650	0/0:25,0:25:75.13:0,75,749
chr10	36018809	.	CTGTGTG	C	5046.84	PASS	AB=0.686;AC=38;AF=0.704;AN=54;BaseQRankSum=6.459;DP=568;FS=1.370;HRun=0;HaplotypeScore=130.7308;InbreedingCoeff=0.4787;MQ=62.18;MQ0=12;MQRankSum=-4.162;QD=12.55;ReadPosRankSum=-1.881;VQSLOD=3.7929;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:11.85:0,12,82	1/1:0,5:5:6.02:125,6,0	./.	0/0:31,0:21:8.33:0,8,53	0/1:3,0:11:5.82:6,0,23	1/1:8,15:23:21.04:384,21,0	1/1:9,10:20:12.04:225,12,0	0/1:24,0:22:7.83:61,0,8	0/1:6,0:24:7.89:25,0,8	1/1:12,11:23:27.75:458,28,0	1/1:3,7:10:17.89:259,18,0	0/0:19,0:21:29.63:0,30,687	1/1:6,9:15:23.95:449,24,0	1/1:5,14:20:24.85:455,25,0	1/1:2,16:18:17.65:362,18,0	0/1:8,0:22:1.84:2,0,21	1/1:5,1:23:6.77:70,7,0	1/1:11,10:19:12.04:249,12,0	1/1:8,5:13:21.06:388,21,0	1/1:9,5:13:11.89:151,12,0	0/1:20,15:35:9.21:50,0,9	0/1:8,9:15:5:182,0,5	0/0:12,0:12:15.03:0,15,335	0/0:36,0:37:69.20:0,69,1903	1/1:0,9:9:9.03:175,9,0	1/1:11,11:22:4.52:451,5,0	1/1:10,5:17:19.38:282,19,0	1/1:6,8:13:12.04:239,12,0
chr10	36020356	.	A	AG	2665.24	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=8.361;DP=750;FS=0.944;HRun=4;HaplotypeScore=101.4627;InbreedingCoeff=0.9988;MQ=83.48;MQ0=0;MQRankSum=-11.041;QD=29.95;ReadPosRankSum=0.154;VQSLOD=3.1679;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,123,1384	0/0:11,0:11:24.07:0,24,272	0/0:22,0:22:57.38:0,57,584	0/0:24,0:24:54.01:0,54,607	1/1:0,17:18:36.06:452,36,0	0/0:17,0:17:48.14:0,48,544	0/0:34,0:34:93.22:0,93,1041	0/0:28,0:28:72.17:0,72,791	1/1:2,18:20:57.15:756,57,0	0/0:35,0:35:96.26:0,96,1069	0/0:17,0:17:45.10:0,45,490	0/0:35,0:35:99:0,102,1157	0/0:27,0:27:78.22:0,78,885	0/0:29,0:29:84.22:0,84,943	0/0:33,0:33:84.24:0,84,952	1/1:2,18:20:57.15:757,57,0	1/1:6,25:31:69.08:860,69,0	0/0:27,0:27:75.21:0,75,851	0/0:36,0:36:99:0,99,1113	0/0:15,0:15:42.12:0,42,476	0/0:76,0:76:99:0,214,2386	0/0:17,0:17:48.14:0,48,544	0/0:15,0:15:42.12:0,42,476	0/0:37,0:37:99:0,102,1156	0/0:24,0:24:66.15:0,66,729	0/0:34,0:34:96.26:0,96,1081	0/0:16,0:16:45.11:0,45,499	0/0:8,0:8:24.07:0,24,272
chr10	36020371	.	GGGGACATGGGT	G	4927.94	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=12.084;DP=746;FS=3.960;HRun=0;HaplotypeScore=244.1838;InbreedingCoeff=0.9982;MQ=84.82;MQ0=0;MQRankSum=-10.694;QD=64.00;ReadPosRankSum=1.291;VQSLOD=4.1914;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,144,7853	0/0:10,0:10:27.09:0,27,1352	0/0:27,0:26:60.09:0,60,2554	0/0:24,0:24:60.94:0,61,3249	1/1:4,8:12:20.80:608,21,0	0/0:16,0:16:39.13:0,39,2204	0/0:37,0:37:99:0,108,5731	0/0:28,0:28:78.27:0,78,4230	1/1:3,19:22:57.18:1897,57,0	0/0:32,0:32:84.29:0,84,4523	0/0:13,0:13:39.13:0,39,2029	0/0:33,0:33:96.30:0,96,4904	0/0:24,0:24:60.19:0,60,3211	0/0:26,0:26:78.27:0,78,4259	0/0:34,0:34:96.32:0,96,5112	1/1:6,17:23:45.11:1477,45,0	1/1:9,11:20:39:945,39,0	0/0:30,0:29:78.27:0,78,4334	0/0:34,0:34:87.29:0,87,4306	0/0:17,0:17:45.15:0,45,2321	0/0:76,0:76:99:0,208,10698	0/0:18,0:18:51.18:0,51,2793	0/0:17,0:17:45.15:0,45,2447	0/0:39,0:39:99:0,102,5244	0/0:20,0:20:57.20:0,57,3042	0/0:34,0:34:87.30:0,87,4708	0/0:21,0:21:60.21:0,60,3318	0/0:9,0:9:27.09:0,27,1522
chr10	36021324	.	G	GA	2254.54	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=7.305;DP=588;FS=0.479;HRun=6;HaplotypeScore=74.0034;InbreedingCoeff=0.9963;MQ=85.69;MQ0=0;MQRankSum=-3.945;QD=30.88;ReadPosRankSum=1.418;VQSLOD=4.2308;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:93.18:0,93,940	0/0:13,0:13:36.06:0,36,360	0/0:15,0:15:33.04:0,33,324	0/0:26,1:27:25.73:0,26,553	1/1:0,17:17:51.12:622,51,0	0/0:19,0:19:36.08:0,36,367	0/0:20,0:20:54.08:0,54,536	0/0:36,0:36:99:0,102,1036	1/1:0,26:26:72.23:900,72,0	0/0:12,0:12:36.07:0,36,358	0/0:22,0:22:54.12:0,54,550	0/0:28,0:28:81.14:0,81,815	0/0:19,0:19:36.08:0,36,367	0/0:10,0:10:18.03:0,18,177	0/0:21,0:21:51.05:0,51,485	1/1:1,12:13:30.10:377,30,0	1/1:3,14:17:42.12:515,42,0	0/0:22,0:22:60.08:0,60,594	0/0:18,0:18:45.07:0,45,446	0/0:22,0:22:60.13:0,60,612	0/0:13,0:13:33.07:0,33,336	0/0:18,0:18:48.11:0,48,489	0/0:22,0:22:66.12:0,66,660	0/0:23,0:23:66.15:0,66,673	0/0:25,0:25:63.14:0,63,642	0/0:33,0:33:90.19:0,90,913	0/0:23,0:23:54.11:0,54,550	0/0:9,0:9:24.03:0,24,237
chr10	36021374	.	A	AT	810.99	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-6.409;DP=555;FS=1.515;HRun=7;HaplotypeScore=70.2987;InbreedingCoeff=0.9898;MQ=90.51;MQ0=1;MQRankSum=-2.476;QD=24.58;ReadPosRankSum=0.660;VQSLOD=4.1089;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,31:33:75.23:906,75,0	0/0:13,0:13:30.02:0,30,282	0/0:24,0:22:40.97:0,41,392	0/0:34,0:33:56.41:0,56,506	0/0:21,0:21:60.07:0,60,572	0/0:20,0:20:50.75:0,51,474	0/0:16,0:16:42.03:0,42,393	0/0:32,0:32:72.06:0,72,681	0/0:22,0:22:59.89:0,60,563	0/0:17,0:17:42.06:0,42,402	0/0:16,0:16:42.07:0,42,405	0/0:22,0:22:63.09:0,63,602	0/0:10,0:10:30.02:0,30,278	0/0:15,0:15:38.91:0,39,367	0/0:20,0:20:54.03:0,54,505	0/0:15,0:15:41.74:0,42,387	0/0:20,0:20:54.07:0,54,521	0/0:21,0:21:60.06:0,60,571	0/0:24,0:24:54.04:0,54,510	0/0:20,0:20:51.08:0,51,491	0/0:16,0:16:42.06:0,42,406	0/0:14,0:14:42.07:0,42,405	0/0:11,0:11:33.01:0,33,305	0/0:26,0:26:55.17:0,55,654	0/0:23,0:23:63.07:0,63,599	0/0:21,0:21:54.04:0,54,512	0/0:17,1:18:17.83:0,18,451	0/0:11,0:11:33.02:0,33,311
chr10	36022075	.	CTGTGGGGCT	C	3059.14	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=9.287;DP=608;FS=0.000;HRun=0;HaplotypeScore=165.2483;InbreedingCoeff=0.9980;MQ=84.88;MQ0=0;MQRankSum=-10.068;QD=39.22;ReadPosRankSum=1.899;VQSLOD=3.4178;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,114,5300	0/0:14,0:14:39.13:0,39,1517	0/0:21,0:21:48.16:0,48,1961	0/0:19,0:19:48.16:0,48,2031	1/1:9,10:19:24.08:694,24,0	0/0:21,0:21:51.18:0,51,2241	0/0:23,0:23:63.22:0,63,2944	0/0:16,0:16:36.11:0,36,1465	1/1:6,10:16:24.08:696,24,0	0/0:20,0:20:54.19:0,54,2442	0/0:15,0:15:30.10:0,30,1298	0/0:23,0:23:66.23:0,66,2813	0/0:16,0:16:45.13:0,45,1995	0/0:15,0:15:39.13:0,39,1823	0/0:23,0:23:66.23:0,66,2982	1/1:5,14:19:39.13:1132,39,0	1/1:9,15:24:24.08:697,24,0	0/0:24,0:24:69.24:0,69,3117	0/0:22,0:22:54.17:0,54,2113	0/0:25,0:25:69.24:0,69,3149	0/0:44,0:44:99:0,123,5582	0/0:20,0:20:57.18:0,57,2546	0/0:17,0:17:48.16:0,48,2155	0/0:31,0:31:75.26:0,75,3496	0/0:19,0:19:51.17:0,51,2172	0/0:24,0:24:60.21:0,60,2644	0/0:19,0:19:48.12:0,48,2082	0/0:11,0:11:33.11:0,33,1552
chr10	36023332	.	AC	A	3104.91	PASS	AB=0.981;AC=36;AF=0.750;AN=48;BaseQRankSum=5.265;DP=477;FS=8.432;HRun=1;HaplotypeScore=71.5914;InbreedingCoeff=0.6383;MQ=37.59;MQ0=26;MQRankSum=-5.850;QD=8.37;ReadPosRankSum=-1.831;VQSLOD=-0.1721;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:42,0:40:12.09:12,0,35	1/1:6,0:5:10.48:70,10,0	0/0:25,0:5:1.93:0,2,38	0/1:25,1:11:8.76:9,0,47	./.	1/1:12,0:11:17.82:83,18,0	1/1:13,0:11:18.82:109,19,0	1/1:34,1:30:71.14:453,71,0	0/0:1,0:1:0:0,0,0	1/1:25,0:22:54.99:345,55,0	1/1:18,1:17:33.83:183,34,0	0/0:25,0:25:5.25:0,5,264	1/1:12,0:10:20.11:117,20,0	1/1:13,0:9:19.12:111,19,0	1/1:23,0:19:28.31:165,28,0	./.	./.	1/1:11,0:9:23.79:172,24,0	1/1:15,0:12:27.95:168,28,0	1/1:17,0:16:33.95:159,34,0	./.	1/1:6,0:6:10.63:58,11,0	0/0:21,0:21:22.07:0,22,320	0/0:24,0:24:52.42:0,52,502	1/1:28,0:25:42.01:268,42,0	1/1:27,0:25:63.34:412,63,0	1/1:28,1:25:43.43:258,43,0	1/1:12,0:10:18.09:105,18,0
chr10	36023342	.	AAC	A	2533.51	PASS	AB=1.000;AC=28;AF=0.583;AN=48;BaseQRankSum=0.739;DP=488;FS=46.997;HRun=0;HaplotypeScore=85.6797;InbreedingCoeff=0.2120;MQ=42.28;MQ0=13;MQRankSum=-0.655;QD=6.94;ReadPosRankSum=-7.334;VQSLOD=-0.6873;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:6,34:38:26.74:304,27,0	1/1:6,0:6:1.62:74,2,0	0/0:20,0:4:11.44:0,11,94	0/0:20,0:13:14.04:0,14,213	./.	0/1:14,0:13:40.14:53,0,40	1/1:12,0:12:9.68:95,10,0	1/1:39,0:34:40.94:380,41,0	0/0:1,0:1:0.47:0,0,1	1/1:25,0:24:9.10:259,9,0	1/1:22,0:21:6.90:178,7,0	0/0:28,0:28:62.90:0,63,885	0/1:10,0:9:19.51:20,0,39	0/1:15,0:11:5.16:93,0,5	1/1:27,0:23:3.27:132,3,0	./.	./.	1/1:13,0:10:24.56:157,25,0	0/1:18,0:15:8.01:145,0,8	0/1:19,0:18:56.32:93,0,56	./.	0/1:6,0:6:14.60:40,0,15	0/0:21,0:21:45.58:0,46,629	0/0:22,0:22:56.18:0,56,816	0/1:26,0:24:21.54:132,0,22	1/1:32,0:30:29.72:337,30,0	0/1:30,0:26:47.61:104,0,48	1/1:11,0:9:14.78:102,15,0
chr10	36023343	.	AC	A	3956.07	PASS	AC=36;AF=0.750;AN=48;BaseQRankSum=6.004;DP=483;FS=0.000;HRun=1;HaplotypeScore=75.2347;InbreedingCoeff=0.9211;MQ=42.91;MQ0=13;MQRankSum=-5.433;QD=10.90;ReadPosRankSum=-2.401;VQSLOD=0.5914;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:37,2:37:26.90:235,27,0	1/1:7,0:7:16.17:120,16,0	0/0:19,0:5:14.79:0,15,108	0/0:18,0:12:8.53:0,9,149	./.	1/1:13,0:12:19.72:124,20,0	1/1:12,0:12:21.14:119,21,0	1/1:39,0:34:75.26:512,75,0	0/0:1,0:1:0:0,0,0	1/1:25,0:24:46.36:357,46,0	1/1:21,1:21:32.94:244,33,0	0/0:29,0:29:44.80:0,45,683	1/1:10,0:9:14.12:87,14,0	1/1:15,0:11:22.79:151,23,0	1/1:25,0:21:35.72:228,36,0	./.	./.	1/1:13,0:10:26.38:178,26,0	1/1:19,0:16:30.06:248,30,0	1/1:20,0:19:37.88:218,38,0	./.	1/1:6,0:6:11.63:81,12,0	0/0:20,0:20:50.37:0,50,518	0/0:22,0:22:54.36:0,54,618	1/1:26,0:24:34.42:209,34,0	1/1:32,0:30:75.25:513,75,0	1/1:29,0:25:36.93:204,37,0	1/1:10,1:9:16.45:129,16,0
chr10	36025221	.	TCTGGC	T	1989.98	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.952;DP=755;FS=0.000;HRun=0;HaplotypeScore=139.7512;InbreedingCoeff=0.9994;MQ=66.70;MQ0=0;MQRankSum=-2.322;QD=47.38;ReadPosRankSum=2.415;VQSLOD=3.8386;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,41:42:96.33:2085,96,0	0/0:10,0:10:30.10:0,30,952	0/0:22,0:20:57.20:0,57,1552	0/0:24,0:24:62.65:0,63,1624	0/0:30,0:30:87.30:0,87,2703	0/0:24,0:24:72.25:0,72,2206	0/0:25,0:25:75.24:0,75,2239	0/0:33,0:33:93.29:0,93,2691	0/0:24,0:24:72.25:0,72,2284	0/0:28,0:28:78.27:0,78,2463	0/0:29,0:29:81.28:0,81,2550	0/0:19,0:19:54.19:0,54,1648	0/0:23,0:23:66.23:0,66,1991	0/0:24,0:24:72.25:0,72,2221	0/0:29,0:29:84.29:0,84,2616	0/0:26,0:26:78.27:0,78,2447	0/0:30,0:30:90.29:0,90,2707	0/0:30,0:30:87.30:0,87,2722	0/0:17,0:16:45.15:0,45,1345	0/0:31,0:31:93.32:0,93,2835	0/0:45,0:45:99:0,132,4055	0/0:22,0:22:63.20:0,63,1880	0/0:29,0:29:84.27:0,84,2527	0/0:16,0:16:42.14:0,42,1332	0/0:25,0:25:75.26:0,75,2319	0/0:35,0:35:99:0,105,3196	0/0:36,0:36:99:0,108,3158	0/0:26,0:26:66.23:0,66,2066
chr10	36026990	.	TG	T	1829.10	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=11.944;DP=533;FS=10.202;HRun=8;HaplotypeScore=64.0903;InbreedingCoeff=0.9814;MQ=78.19;MQ0=0;MQRankSum=0.174;QD=21.52;ReadPosRankSum=1.781;VQSLOD=3.5417;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:57.17:0,57,688	0/0:8,0:8:18.06:0,18,217	0/0:10,0:10:24.07:0,24,288	0/0:24,0:24:46.95:0,47,450	1/1:4,12:16:39.06:376,39,0	0/0:19,0:20:47.98:0,48,558	0/0:31,0:31:87.24:0,87,1026	0/0:24,1:25:28.19:0,28,612	1/1:3,12:15:33.05:318,33,0	0/0:16,0:16:42.13:0,42,507	0/0:6,0:6:18.06:0,18,217	0/0:22,0:22:63.18:0,63,749	0/0:23,0:24:72.07:0,72,837	0/0:12,0:12:33.10:0,33,398	0/0:21,0:21:59.33:0,59,722	1/1:0,19:19:54.05:513,54,0	1/1:6,29:35:81.12:782,81,0	0/0:22,0:22:57.17:0,57,688	0/0:15,0:15:39.98:0,40,452	0/0:14,0:14:39.12:0,39,471	0/0:38,0:38:95.95:0,96,1119	0/0:20,0:20:57.17:0,57,678	0/0:19,0:19:51.14:0,51,604	0/0:23,1:24:43.22:0,43,782	0/0:11,0:11:30.09:0,30,358	0/0:13,1:14:10.14:0,10,406	0/0:22,0:22:66.18:0,66,768	0/0:9,0:9:27.07:0,27,314
chr10	36027385	.	G	GCACACACACACA	2877.38	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=4.725;DP=787;FS=0.675;HRun=0;HaplotypeScore=258.6230;InbreedingCoeff=0.9587;MQ=64.44;MQ0=7;MQRankSum=-5.619;QD=26.40;ReadPosRankSum=-2.412;VQSLOD=2.5199;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:48.61:0,49,2659	0/0:3,0:3:9.03:0,9,342	0/0:30,0:19:42.13:0,42,682	0/0:40,0:24:55.75:0,56,827	1/1:27,0:26:27.10:326,27,0	0/0:17,0:17:45.08:0,45,1000	0/0:29,0:29:83.92:0,84,1775	0/0:26,0:26:72.15:0,72,1270	1/1:15,12:30:12.01:1271,12,0	0/0:22,0:21:63.21:0,63,1755	0/0:12,0:12:30.08:0,30,731	0/0:43,0:42:99:0,120,3147	0/0:31,0:31:90.21:0,90,2244	0/0:27,0:27:78.22:0,78,2320	0/0:38,0:38:99:0,105,2926	1/1:6,14:24:9.50:482,10,0	1/1:10,2:27:24.51:952,25,0	0/0:26,0:26:75.22:0,75,2074	0/0:17,0:16:42.03:0,42,855	0/0:19,0:19:51:0,51,1372	0/0:87,0:87:99:0,238,6388	0/0:16,0:16:45.12:0,45,1190	0/0:19,0:19:51.11:0,51,1375	0/0:44,0:44:99:0,129,3368	0/0:20,0:20:54.19:0,54,1749	0/0:23,0:22:59.90:0,60,1350	0/0:28,0:27:81.24:0,81,2227	0/0:8,0:8:24.08:0,24,839
chr10	36027388	.	TAC	T	557.34	PASS	AB=0.919;AC=8;AF=0.143;AN=56;BaseQRankSum=6.801;DP=810;FS=3.652;HRun=0;HaplotypeScore=107.5843;InbreedingCoeff=0.1035;MQ=61.90;MQ0=7;MQRankSum=5.835;QD=2.73;ReadPosRankSum=1.799;VQSLOD=1.8338;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:24,29:55:13.19:594,13,0	0/0:4,0:4:12.04:0,12,187	0/0:30,0:17:9.03:0,9,141	0/0:39,0:22:18.42:0,18,243	0/0:28,0:27:12.86:0,13,99	0/0:19,0:19:4.61:0,5,455	0/0:28,0:29:21.08:0,21,651	0/1:27,1:28:0.33:0,0,369	0/0:31,0:30:23.50:0,23,190	0/1:23,4:27:44.53:45,0,648	0/0:15,0:15:36.05:0,36,487	0/0:40,1:41:52.41:0,52,1190	0/0:33,0:33:69.14:0,69,966	0/0:24,1:25:28.39:0,28,901	0/0:39,0:39:78.23:0,78,1169	0/0:20,0:20:9.01:0,9,97	0/0:26,0:26:11.57:0,12,84	0/0:26,0:26:52.84:0,53,832	0/0:17,0:16:24.01:0,24,337	0/1:20,2:22:15.48:15,0,641	0/0:82,5:87:11.38:0,11,2252	0/1:17,0:18:10.48:10,0,365	0/0:14,3:18:1.28:0,1,436	0/1:41,3:45:2.49:2,0,1021	0/0:19,0:21:34.03:0,34,686	0/0:26,1:26:19.67:0,20,632	0/0:30,0:29:60.15:0,60,883	0/1:7,1:8:13.74:14,0,260
chr10	36027655	.	TTA	T	3765.69	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=-3.989;DP=567;FS=2.306;HRun=0;HaplotypeScore=113.8960;InbreedingCoeff=0.8197;MQ=73.48;MQ0=0;MQRankSum=1.654;QD=31.64;ReadPosRankSum=-0.626;VQSLOD=5.4299;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,108,1994	0/0:4,0:4:11.93:0,12,88	0/0:17,0:11:9.18:0,9,142	0/0:10,0:10:8.06:0,8,112	1/1:0,32:32:93.05:1273,93,0	0/0:15,0:14:35.65:0,36,242	0/0:12,0:12:32.77:0,33,237	0/0:25,0:25:32.19:0,32,451	1/1:0,23:23:57.19:844,57,0	0/0:21,0:20:42.72:0,43,405	0/1:23,0:23:2.40:2,0,322	0/0:23,0:23:68.17:0,68,1104	0/0:13,0:13:19.77:0,20,226	0/0:14,0:14:29.70:0,30,204	0/0:29,0:29:71.12:0,71,509	1/1:0,20:20:48.16:712,48,0	1/1:0,21:21:63.21:934,63,0	0/0:21,0:21:27.66:0,28,270	0/0:20,0:20:0.73:0,1,344	0/0:35,0:35:63:0,63,622	0/0:17,0:17:50.58:0,51,353	0/0:12,0:12:32.69:0,33,229	0/0:19,0:19:57.16:0,57,1006	0/0:11,0:11:33.08:0,33,559	0/0:22,0:22:59.60:0,60,442	0/0:30,0:30:55.35:0,55,648	0/0:18,0:18:53.37:0,53,368	0/0:24,0:24:53.50:0,53,387
chr10	36027665	.	AT	A	11762.63	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-1.730;DP=553;FS=11.382;HRun=1;HaplotypeScore=73.1876;InbreedingCoeff=0.9614;MQ=76.53;MQ0=0;MQRankSum=1.160;QD=34.09;ReadPosRankSum=0.284;VQSLOD=3.5269;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,111,1523	1/1:0,3:3:9.03:125,9,0	0/0:18,0:13:14.24:0,14,225	0/0:6,0:7:3:0,3,29	0/0:30,0:30:52.58:0,53,201	1/1:0,15:15:36.12:492,36,0	1/1:0,10:10:24.08:333,24,0	1/1:0,26:26:75.18:966,75,0	0/0:23,0:23:48.82:0,49,201	1/1:0,25:25:72.17:909,72,0	1/1:1,22:23:58.93:782,59,0	0/0:25,0:25:62.16:0,62,901	1/1:1,13:14:30.57:413,31,0	1/1:0,13:13:27.09:374,27,0	1/1:0,26:26:54.18:745,54,0	0/0:20,0:20:45.35:0,45,201	0/0:23,0:23:57.44:0,57,237	1/1:0,23:23:48.16:659,48,0	1/1:0,20:21:60.17:779,60,0	1/1:0,30:30:84.20:1111,84,0	1/1:0,17:17:48.16:666,48,0	1/1:0,12:12:30.01:382,30,0	0/0:16,0:16:48.16:0,48,682	0/0:9,0:9:24.08:0,24,343	1/1:1,20:21:43.01:659,43,0	1/1:0,28:28:84.26:1130,84,0	1/1:0,19:19:48.15:658,48,0	1/1:0,19:19:42.14:579,42,0
chr10	36028315	.	CACGTGGATATATATATATATAT	C	2383.88	PASS	AC=2;AF=0.038;AN=52;BaseQRankSum=5.211;DP=184;FS=39.971;HRun=0;HaplotypeScore=95.0660;InbreedingCoeff=0.3808;MQ=79.25;MQ0=0;MQRankSum=-4.881;QD=85.14;ReadPosRankSum=3.594;VQSLOD=1.3925;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,24:28:42.14:2477,42,0	./.	0/0:9,0:7:18.06:0,18,424	0/0:17,0:11:14.47:0,14,311	./.	0/0:8,0:8:21.06:0,21,936	0/0:3,0:3:9.01:0,9,302	0/0:6,0:6:18.06:0,18,808	0/0:4,0:4:3.01:0,3,50	0/0:3,0:3:9.03:0,9,343	0/0:8,0:8:21.06:0,21,656	0/0:1,0:1:3.01:0,3,102	0/0:7,0:7:21.05:0,21,750	0/0:1,0:1:3.01:0,3,102	0/0:6,0:6:18.06:0,18,538	0/0:10,0:10:21.07:0,21,507	0/0:15,0:15:15.03:0,15,312	0/0:8,0:8:18.06:0,18,646	0/0:7,0:7:12.04:0,12,656	0/0:3,0:3:6.02:0,6,242	0/0:6,0:6:15.05:0,15,586	0/0:4,0:4:12.04:0,12,566	0/0:6,0:6:18.06:0,18,679	0/0:9,0:9:24.08:0,24,1115	0/0:2,0:2:6.02:0,6,220	0/0:3,0:3:9.02:0,9,396	0/0:1,0:1:3.01:0,3,132	0/0:2,0:2:6.02:0,6,375
chr10	36028787	.	C	CCACA	3733.35	PASS	AB=0.812;AC=30;AF=0.556;AN=54;BaseQRankSum=-4.399;DP=753;FS=19.112;HRun=0;HaplotypeScore=171.4632;InbreedingCoeff=0.4147;MQ=67.50;MQ0=15;MQRankSum=-0.931;QD=7.96;ReadPosRankSum=-1.413;VQSLOD=1.6800;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:40:5.85:0,6,56	1/1:8,0:12:11.75:123,12,0	./.	0/1:40,0:26:0:0,0,0	0/0:11,0:20:17.82:0,18,167	0/1:21,5:33:32.24:358,0,32	0/1:27,7:39:34.58:83,0,35	1/1:26,0:24:5.95:54,6,0	0/0:13,0:20:18.02:0,18,168	1/1:13,10:26:39.56:677,40,0	1/1:11,4:22:1.03:219,1,0	0/0:26,0:31:21.02:0,21,243	1/1:14,2:20:11.66:198,12,0	1/1:16,6:25:13.01:310,13,0	1/1:20,16:36:17.80:363,18,0	0/0:10,0:19:29.94:0,30,274	0/0:19,0:31:32.89:0,33,307	1/1:8,5:18:11.51:165,12,0	0/1:15,0:15:18.91:74,0,19	1/1:11,1:14:2.64:70,3,0	0/1:24,0:41:51.88:63,0,52	0/0:17,6:26:5.83:0,6,40	0/0:15,0:16:15.52:0,16,196	0/0:28,0:32:48.06:0,48,577	0/1:13,2:26:58.20:140,0,58	1/1:20,8:30:0.84:579,1,0	1/1:13,6:24:6.91:119,7,0	1/1:7,5:12:6.02:140,6,0
chr10	36032091	.	C	CA	4415.41	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-6.869;DP=746;FS=0.811;HRun=1;HaplotypeScore=76.0380;InbreedingCoeff=0.9998;MQ=90.61;MQ0=0;MQRankSum=-0.622;QD=39.78;ReadPosRankSum=2.702;VQSLOD=5.5509;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:37:99:0,105,1349	0/0:11,0:11:33.11:0,33,428	0/0:29,0:29:78.20:0,78,925	0/0:34,0:34:80.12:0,80,1029	1/1:1,23:24:69.17:1006,69,0	0/0:21,0:21:54.18:0,54,701	0/0:33,0:33:96.30:0,96,1232	0/0:34,0:34:99:0,99,1248	1/1:0,30:30:78.26:1168,78,0	0/0:35,0:35:99:0,99,1266	0/0:17,0:17:48.16:0,48,623	0/0:23,0:23:57.19:0,57,739	0/0:25,0:25:57.16:0,57,711	0/0:32,0:32:72.23:0,72,934	0/0:31,0:31:81.25:0,81,1037	1/1:0,26:26:66.22:988,66,0	1/1:1,30:31:87.21:1254,87,0	0/0:19,0:19:51.15:0,51,647	0/0:17,0:17:48.16:0,48,623	0/0:19,0:19:54.16:0,54,687	0/0:36,0:36:99:0,108,1387	0/0:30,0:30:81.22:0,81,1002	0/0:11,0:11:30.10:0,30,389	0/0:22,0:22:54.18:0,54,701	0/0:27,0:27:81.26:0,81,1051	0/0:29,0:29:84.25:0,84,1055	0/0:37,0:37:96.26:0,96,1241	0/0:25,0:25:75.22:0,75,957
chr10	36032534	.	CTCCCAGG	C	3662.10	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=9.990;DP=680;FS=3.403;HRun=0;HaplotypeScore=154.7006;InbreedingCoeff=0.9975;MQ=84.80;MQ0=0;MQRankSum=-11.376;QD=44.66;ReadPosRankSum=1.662;VQSLOD=3.3110;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,123,4601	0/0:11,0:11:30.10:0,30,1079	0/0:29,0:29:70.79:0,71,2414	0/0:24,0:24:63.05:0,63,1982	1/1:1,10:11:18.06:449,18,0	0/0:28,0:28:63.22:0,63,2390	0/0:25,0:25:72.23:0,72,2607	0/0:34,0:34:93.32:0,93,3476	1/1:1,15:16:39.13:972,39,0	0/0:26,0:26:72.25:0,72,2740	0/0:20,0:20:54.17:0,54,1911	0/0:26,0:26:57.20:0,57,2212	0/0:18,0:18:51.18:0,51,1948	0/0:28,0:28:81.28:0,81,3103	0/0:35,0:35:83.86:0,84,3217	1/1:3,24:27:57.20:1418,57,0	1/1:10,18:28:32.78:823,33,0	0/0:14,0:13:36.12:0,36,1360	0/0:25,0:25:72.25:0,72,2630	0/0:31,0:31:72.25:0,72,2757	0/0:26,0:26:72.23:0,72,2631	0/0:19,0:19:42.14:0,42,1515	0/0:25,0:25:60.21:0,60,2307	0/0:22,0:22:60.21:0,60,2285	0/0:21,0:21:54.19:0,54,2100	0/0:25,0:25:75.26:0,75,2833	0/0:28,0:28:72.25:0,72,2776	0/0:14,0:14:39.13:0,39,1513
chr10	36036223	.	G	GT	10051.81	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-9.839;DP=571;FS=2.738;HRun=11;HaplotypeScore=55.6173;InbreedingCoeff=0.8406;MQ=71.94;MQ0=1;MQRankSum=-0.472;QD=20.68;ReadPosRankSum=1.510;VQSLOD=5.9113;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,17:23:21.85:403,22,0	1/1:5,8:13:0.86:190,1,0	0/0:20,0:15:11.93:0,12,138	0/0:7,0:7:0.33:0,0,7	1/1:6,28:35:40.47:747,40,0	1/1:4,20:26:50.77:485,51,0	1/1:0,6:6:15.03:152,15,0	1/1:13,28:41:60.91:788,61,0	1/1:1,8:9:18.04:183,18,0	1/1:5,26:30:81.10:805,81,0	1/1:7,26:35:24.35:700,24,0	0/0:23,0:23:62.65:0,63,475	1/1:4,16:20:45.09:457,45,0	1/1:2,14:16:18.85:373,19,0	1/1:7,7:14:6.61:223,7,0	1/1:2,10:13:23.88:227,24,0	1/1:2,27:29:26.45:597,26,0	1/1:2,10:14:12.50:279,13,0	1/1:8,18:27:32.13:521,32,0	1/1:5,20:25:60.07:592,60,0	1/1:1,10:11:21.04:213,21,0	1/1:1,7:9:23.88:227,24,0	0/0:20,0:21:52.82:0,53,401	0/0:14,0:14:26.87:0,27,209	1/1:4,19:23:24.86:433,25,0	1/1:4,24:28:13.25:652,13,0	1/1:6,15:22:24.70:417,25,0	1/1:2,13:16:39.04:386,39,0
chr10	36037839	.	CT	C	961.64	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=5.805;DP=342;FS=0.000;HRun=1;HaplotypeScore=38.8386;InbreedingCoeff=0.9448;MQ=88.64;MQ0=0;MQRankSum=-0.472;QD=27.48;ReadPosRankSum=1.069;VQSLOD=3.2991;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:69.19:0,69,909	0/0:9,0:9:27.08:0,27,360	0/0:18,0:18:25.53:0,26,474	0/0:13,0:13:20.88:0,21,234	1/1:1,18:19:42.07:552,42,0	0/0:22,0:22:66.17:0,66,868	0/0:8,0:8:24.08:0,24,335	0/0:24,0:24:54.08:0,54,642	1/1:0,4:4:12.04:167,12,0	0/0:8,0:8:24.08:0,24,323	0/0:17,0:17:48.14:0,48,653	0/0:8,0:8:24.07:0,24,318	0/0:6,0:6:17.97:0,18,184	0/0:6,0:6:18.05:0,18,234	0/0:9,0:9:27.09:0,27,376	1/1:0,4:4:9.03:126,9,0	1/1:0,8:8:21:269,21,0	0/0:28,0:28:84.28:0,84,1168	0/0:14,0:14:42.12:0,42,557	0/0:11,0:11:30.10:0,30,419	0/0:18,0:18:54.18:0,54,750	0/0:3,0:3:9.03:0,9,126	0/0:6,0:6:18.06:0,18,250	0/0:7,0:7:21.07:0,21,293	0/0:11,0:11:33.05:0,33,422	0/0:14,0:14:42.14:0,42,586	0/0:16,0:16:48.15:0,48,650	0/0:8,0:8:21.07:0,21,293
chr10	36038327	.	TATCC	T	7336.31	PASS	AB=0.731;AC=49;AF=0.942;AN=52;BaseQRankSum=-0.559;DP=715;FS=5.760;HRun=0;HaplotypeScore=163.2470;InbreedingCoeff=0.1666;MQ=71.46;MQ0=12;MQRankSum=0.805;QD=12.03;ReadPosRankSum=-1.631;VQSLOD=3.5244;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:24:6.01:56,6,0	0/1:12,7:19:12.05:100,0,12	./.	./.	1/1:17,0:35:12:112,12,0	1/1:16,9:26:21.54:322,22,0	1/1:17,4:21:6.02:92,6,0	0/0:33,0:33:0:0,0,0	1/1:9,0:22:15.02:140,15,0	1/1:21,14:34:42.11:580,42,0	1/1:13,5:19:6.49:86,6,0	1/1:16,16:32:39.13:596,39,0	1/1:15,17:32:45.13:664,45,0	1/1:17,12:29:33.11:505,33,0	1/1:11,14:24:30.10:459,30,0	1/1:8,0:26:23.52:204,24,0	1/1:13,0:16:8.04:62,8,0	1/1:6,7:13:15.05:226,15,0	1/1:15,6:20:18.06:275,18,0	1/1:6,12:18:27.05:369,27,0	1/1:16,11:27:27.09:413,27,0	1/1:16,12:28:14.96:171,15,0	1/1:9,6:15:18.02:241,18,0	1/1:11,11:22:6.13:302,6,0	1/1:22,10:32:18.05:257,18,0	1/1:12,12:24:33.05:464,33,0	1/1:17,9:26:24.08:367,24,0	1/1:14,8:22:18.06:275,18,0
chr10	36038716	.	C	CACAT	2573.60	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=7.814;DP=925;FS=1.809;HRun=0;HaplotypeScore=154.1961;InbreedingCoeff=0.9950;MQ=70.93;MQ0=6;MQRankSum=2.824;QD=18.92;ReadPosRankSum=-1.492;VQSLOD=3.2443;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:42:99:0,101,765	0/0:6,0:6:18:0,18,182	0/0:56,0:43:99:0,104,969	0/0:46,0:33:74.54:0,75,754	1/1:3,24:27:28.58:324,29,0	0/0:47,0:47:99:0,135,1551	0/0:27,0:27:74.64:0,75,744	0/0:36,0:36:99:0,99,899	1/1:7,33:42:18.56:876,19,0	0/0:34,0:34:96.09:0,96,981	0/0:19,0:19:53.83:0,54,625	0/0:29,0:29:74.72:0,75,961	0/0:35,0:35:99:0,102,1301	0/0:52,0:51:99:0,141,1717	0/0:35,0:35:99:0,102,1198	1/1:2,31:35:27.09:672,27,0	1/1:6,25:32:30.53:861,31,0	0/0:33,0:33:85.83:0,86,861	0/0:18,0:18:51.32:0,51,513	0/0:36,0:36:99:0,102,1248	0/0:61,0:59:99:0,156,1801	0/0:27,0:27:75.01:0,75,870	0/0:15,0:15:39.02:0,39,454	0/0:38,0:38:99:0,104,1261	0/0:29,0:29:86.89:0,87,947	0/0:38,0:38:99:0,113,1203	0/0:17,0:17:51:0,51,578	0/0:12,0:12:35.99:0,36,473
chr10	36038717	.	ACATC	A	428.64	PASS	AB=0.967;AC=5;AF=0.100;AN=50;BaseQRankSum=3.777;DP=921;FS=0.000;HRun=0;HaplotypeScore=154.4301;InbreedingCoeff=0.2910;MQ=69.80;MQ0=9;MQRankSum=0.550;QD=2.57;ReadPosRankSum=0.655;VQSLOD=2.5187;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:43,0:41:8.85:9,0,11	0/0:6,0:6:3.01:0,3,70	./.	./.	0/0:27,0:26:6.02:0,6,102	0/0:46,1:47:8.66:0,9,1104	0/0:27,0:27:21.07:0,21,453	./.	0/0:39,0:39:33.09:0,33,526	0/0:35,0:35:21.04:0,21,371	0/0:19,0:19:21.07:0,21,484	0/0:28,0:28:39.13:0,39,866	0/0:35,0:35:48.16:0,48,1060	0/0:51,0:50:69.24:0,69,1556	0/0:35,0:35:45.14:0,45,943	0/0:34,0:34:27.04:0,27,392	0/0:30,0:30:33.11:0,33,548	1/1:22,12:34:33.09:501,33,0	0/0:19,0:19:9.03:0,9,209	0/0:36,0:36:51.17:0,51,1116	0/1:61,2:61:24.83:25,0,1259	0/1:25,2:27:9.40:9,0,696	0/0:16,0:15:12.04:0,12,278	0/0:37,0:37:48.16:0,48,1052	0/0:29,0:29:24.08:0,24,553	0/0:38,0:38:27.08:0,27,572	0/0:17,0:17:21.07:0,21,480	0/0:12,0:12:18.06:0,18,417
chr10	36039390	.	G	GGAA	674.43	PASS	AB=0.950;AC=3;AF=0.054;AN=56;BaseQRankSum=-0.242;DP=554;FS=4.500;HRun=0;HaplotypeScore=203.4319;InbreedingCoeff=0.4825;MQ=47.31;MQ0=9;MQRankSum=-0.305;QD=8.43;ReadPosRankSum=1.425;VQSLOD=3.2092;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:32,10:42:28.52:767,29,0	0/0:5,0:5:8.01:0,8,37	0/0:34,0:8:5.33:0,5,40	0/1:36,0:7:5.43:5,0,17	0/0:25,0:25:19.55:0,20,199	0/0:18,0:18:36.71:0,37,192	0/0:11,0:11:9.71:0,10,87	0/0:18,0:16:30.67:0,31,192	0/0:20,0:20:41.65:0,42,501	0/0:22,0:22:50.40:0,50,315	0/0:17,0:16:20.35:0,20,100	0/0:25,0:25:59.52:0,60,352	0/0:12,0:12:28.51:0,29,170	0/0:21,0:21:32.40:0,32,215	0/0:12,0:11:11.12:0,11,113	0/0:18,0:18:37.84:0,38,411	0/0:26,0:26:35.83:0,36,364	0/0:12,0:11:21.21:0,21,121	0/0:13,0:13:29.55:0,30,152	0/0:21,0:21:5.89:0,6,66	0/0:20,0:20:14.28:0,14,92	0/0:22,0:21:23.68:0,24,117	0/0:14,0:14:23.81:0,24,143	0/0:26,0:26:28.04:0,28,197	0/0:23,0:23:32:0,32,223	0/0:20,0:19:27.61:0,28,166	0/0:8,0:8:9.08:0,9,69	0/0:11,0:11:6.24:0,6,123
chr10	36039396	.	GGTAGA	G	12034.28	PASS	AB=0.919;AC=46;AF=0.821;AN=56;BaseQRankSum=-2.444;DP=498;FS=32.392;HRun=0;HaplotypeScore=157.5065;InbreedingCoeff=0.0961;MQ=47.75;MQ0=9;MQRankSum=-1.941;QD=25.82;ReadPosRankSum=-0.469;VQSLOD=2.8979;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:22,19:41:0.16:536,0,0	0/1:5,0:5:3.11:64,0,3	0/0:31,0:9:14.06:0,14,228	0/1:39,0:7:3.18:3,0,115	1/1:2,21:23:21.03:380,21,0	1/1:16,0:17:31.08:740,31,0	1/1:11,0:11:21.07:424,21,0	0/1:13,0:11:35.59:303,0,36	1/1:0,19:19:42.14:975,42,0	1/1:22,0:22:5.40:825,5,0	1/1:17,0:16:23.99:467,24,0	1/1:23,0:23:53.59:715,54,0	1/1:11,0:11:4.90:476,5,0	1/1:20,0:20:51.87:1034,52,0	1/1:12,0:11:21.53:361,22,0	1/1:0,15:15:36.12:831,36,0	1/1:2,20:22:28.44:624,28,0	1/1:11,0:10:15.19:211,15,0	0/1:5,5:10:13.53:259,0,14	0/1:15,0:15:1.31:154,0,1	1/1:13,0:13:2.33:14,2,0	1/1:19,0:19:13.29:248,13,0	1/1:10,0:10:22.08:339,22,0	1/1:23,0:24:35.45:514,35,0	0/1:20,0:20:36.91:531,0,37	0/1:16,0:15:7.48:413,0,7	1/1:9,0:9:6.50:284,6,0	1/1:9,0:9:9.41:308,9,0
chr10	36039397	.	GT	G	6587.77	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=0.261;DP=472;FS=1.377;HRun=1;HaplotypeScore=151.0865;InbreedingCoeff=0.8628;MQ=48.41;MQ0=9;MQRankSum=-3.451;QD=16.43;ReadPosRankSum=2.535;VQSLOD=5.2749;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:32,3:38:45.56:308,46,0	1/1:2,1:3:5.60:41,6,0	0/0:31,1:9:12.59:0,13,145	0/0:38,0:7:8.74:0,9,95	1/1:21,1:23:17.03:88,17,0	1/1:4,10:14:40.95:366,41,0	1/1:4,7:11:25.92:255,26,0	1/1:2,6:6:17.91:177,18,0	1/1:19,0:19:32.85:122,33,0	1/1:6,15:21:56.59:527,57,0	1/1:2,13:14:22.58:204,23,0	1/1:3,20:23:66.02:776,66,0	1/1:3,7:10:23.73:234,24,0	1/1:5,15:20:56.56:554,57,0	1/1:6,5:11:26.85:267,27,0	1/1:15,0:15:28.83:136,29,0	1/1:20,1:21:22.10:101,22,0	1/1:7,4:10:20.49:145,20,0	1/1:8,1:9:23.58:194,24,0	1/1:6,8:14:22.79:142,23,0	1/1:7,6:13:12.55:82,13,0	1/1:8,9:17:24.99:169,25,0	1/1:0,9:10:24.07:288,24,0	1/1:7,17:24:31.37:374,31,0	1/1:9,10:20:37.33:303,37,0	1/1:7,7:13:38.04:354,38,0	1/1:3,6:9:23.31:186,23,0	1/1:3,5:8:23.53:193,24,0
chr10	36039400	.	GA	G	5475.62	PASS	AB=0.977;AC=53;AF=0.946;AN=56;BaseQRankSum=1.668;DP=469;FS=2.572;HRun=3;HaplotypeScore=157.0779;InbreedingCoeff=0.4709;MQ=50.93;MQ0=8;MQRankSum=-2.964;QD=12.56;ReadPosRankSum=3.087;VQSLOD=3.8925;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:33,3:37:43.73:246,44,0	1/1:2,1:3:5.50:37,5,0	0/0:33,0:9:15.91:0,16,214	0/1:42,1:10:13.51:14,0,64	1/1:23,0:23:14.03:74,14,0	1/1:4,10:14:27.57:275,28,0	1/1:4,6:10:22.88:186,23,0	1/1:1,7:6:17.78:151,18,0	1/1:19,0:19:38.72:176,39,0	1/1:7,13:20:55.03:466,55,0	1/1:4,11:14:22.42:177,22,0	1/1:3,20:23:65.79:665,66,0	1/1:2,7:9:23.69:202,24,0	1/1:4,15:19:50.25:424,50,0	1/1:5,5:10:20.67:160,21,0	1/1:15,0:15:33.50:172,33,0	1/1:21,0:21:25.16:144,25,0	1/1:6,4:10:17.96:119,18,0	1/1:9,0:9:20.48:153,20,0	1/1:7,8:15:19.05:123,19,0	1/1:8,5:13:7.98:37,8,0	1/1:11,8:19:2.37:129,2,0	1/1:1,9:10:18.02:177,18,0	1/1:10,14:24:34.27:337,34,0	1/1:7,10:17:37.21:285,37,0	1/1:7,6:12:34.86:270,35,0	1/1:5,4:9:9:137,9,0	1/1:4,4:8:19.54:141,20,0
chr10	36039401	.	A	AG	8347.32	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-3.257;DP=508;FS=2.553;HRun=1;HaplotypeScore=167.7448;InbreedingCoeff=0.6585;MQ=50.24;MQ0=8;MQRankSum=-2.607;QD=19.32;ReadPosRankSum=-1.264;VQSLOD=4.5861;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:27,11:38:50.36:580,50,0	1/1:1,2:3:6.02:79,6,0	0/0:35,0:10:17.08:0,17,217	0/0:40,0:10:0.77:0,1,95	1/1:23,0:23:9.55:49,10,0	1/1:12,3:15:44.97:494,45,0	1/1:8,3:11:27.08:336,27,0	1/1:11,1:10:24.06:287,24,0	1/1:19,0:19:14.15:93,14,0	1/1:18,6:24:66.05:728,66,0	1/1:18,2:19:24.06:286,24,0	1/1:21,2:23:64.23:544,64,0	1/1:8,2:10:24.06:272,24,0	1/1:17,4:21:54.15:648,54,0	1/1:7,4:11:21.06:251,21,0	1/1:16,0:16:15.54:100,16,0	1/1:21,0:21:8.93:80,9,0	1/1:5,6:11:21.53:295,22,0	1/1:6,3:9:21.50:256,22,0	1/1:11,9:20:24.07:337,24,0	1/1:9,7:16:11.95:191,12,0	1/1:11,9:20:4.26:358,4,0	1/1:13,0:13:11.44:167,11,0	1/1:18,6:24:29.98:262,30,0	1/1:12,6:18:39.11:497,39,0	1/1:10,5:14:42.12:541,42,0	1/1:8,3:11:30:361,30,0	1/1:6,2:8:23.42:257,23,0
chr10	36039402	.	A	AGG	3742.39	PASS	AB=0.971;AC=46;AF=0.821;AN=56;BaseQRankSum=0.547;DP=512;FS=43.375;HRun=0;HaplotypeScore=190.7136;InbreedingCoeff=0.0572;MQ=50.29;MQ0=8;MQRankSum=-4.103;QD=7.85;ReadPosRankSum=3.305;VQSLOD=1.7282;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:38,0:38:47.97:301,48,0	1/1:3,0:3:5.42:23,5,0	0/0:35,0:10:21.62:0,22,248	0/1:40,0:10:19.75:20,0,66	0/1:22,1:23:9.05:9,0,25	1/1:15,0:15:34.89:178,35,0	1/1:9,1:10:23.57:113,24,0	1/1:12,0:10:15.45:155,15,0	0/1:19,0:19:8.38:8,0,14	1/1:22,2:24:64.63:458,65,0	0/1:19,2:20:49.85:61,0,50	1/1:22,1:23:30.65:374,31,0	1/1:10,0:10:9.06:74,9,0	1/1:22,0:22:43.22:218,43,0	1/1:11,0:11:7.48:117,7,0	0/1:16,0:16:0.68:55,0,1	1/1:20,0:21:7.32:56,7,0	1/1:11,0:11:18.17:102,18,0	1/1:9,0:9:11.24:104,11,0	0/1:21,0:21:70.52:111,0,71	0/1:16,1:17:12.24:28,0,12	0/1:19,1:20:71.03:71,0,75	1/1:13,0:13:16.68:101,17,0	1/1:21,2:23:35.01:283,35,0	1/1:18,0:18:25.72:224,26,0	1/1:14,1:14:38.48:278,38,0	1/1:11,1:12:10.41:104,10,0	1/1:8,1:9:21.34:117,21,0
chr10	36039410	.	GGGA	G	4411.17	PASS	AB=0.987;AC=37;AF=0.661;AN=56;BaseQRankSum=2.628;DP=544;FS=7.076;HRun=0;HaplotypeScore=197.0068;InbreedingCoeff=-0.3023;MQ=52.49;MQ0=5;MQRankSum=-0.397;QD=8.39;ReadPosRankSum=2.881;VQSLOD=3.6990;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:34,0:35:12.62:127,0,13	1/1:3,0:3:2.98:22,3,0	0/1:31,0:12:1.16:1,0,187	0/1:44,0:14:16.18:27,0,16	0/1:24,1:25:6.72:183,0,7	0/1:14,1:15:8.26:207,0,8	0/1:11,0:11:2.45:139,0,2	0/1:18,0:16:10.84:301,0,11	1/1:21,0:21:31.88:168,32,0	0/1:26,0:26:4.67:396,0,5	0/1:20,0:19:77.75:78,0,96	1/1:24,0:24:36.53:286,37,0	1/1:13,0:13:14.58:248,15,0	1/1:27,0:27:25.87:400,26,0	0/1:14,1:15:0.54:231,0,1	1/1:18,0:18:20.39:121,20,0	1/1:20,1:22:24.78:209,25,0	0/1:11,0:11:21.92:137,0,22	1/1:10,0:10:3.14:100,3,0	0/1:21,0:21:15.41:15,0,148	0/0:18,0:18:4.90:0,5,51	0/1:23,0:23:96.99:141,0,97	0/1:14,0:14:16.08:173,0,16	1/1:22,0:22:30.12:169,30,0	1/1:19,1:20:1.47:192,1,0	0/1:14,1:15:20.30:171,0,20	0/1:12,0:12:21.25:54,0,21	0/1:10,0:10:8.55:115,0,9
chr10	36042235	.	A	ATGCTGTGTGTCATT	79972.92	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=2.828;DP=722;FS=1.076;HRun=0;HaplotypeScore=282.9854;InbreedingCoeff=0.9990;MQ=79.34;MQ0=0;MQRankSum=-17.764;QD=144.62;ReadPosRankSum=-0.181;VQSLOD=4.6324;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,141,5605	1/1:4,6:12:30.10:1984,30,0	0/0:29,0:29:76.50:0,77,2598	0/0:27,0:28:72.24:0,72,2451	1/1:15,3:21:48.05:1694,48,0	1/1:8,12:22:60.12:3618,60,0	1/1:17,15:38:87.25:5118,87,0	1/1:24,2:27:75.26:4133,75,0	1/1:16,13:35:90.18:5275,90,0	1/1:18,7:31:87.26:4339,87,0	1/1:9,7:16:36.08:2012,36,0	0/0:23,0:23:66.23:0,66,2741	1/1:15,11:28:78.27:4795,78,0	1/1:16,12:29:72.16:4380,72,0	1/1:18,24:46:99:6832,108,0	1/1:13,16:32:66.23:4322,66,0	1/1:12,8:21:54.18:3483,54,0	1/1:10,5:15:42.10:2593,42,0	1/1:17,5:23:60.16:2924,60,0	1/1:10,9:21:54.06:2891,54,0	1/1:16,5:26:39.13:2479,39,0	1/1:14,6:21:51.04:2389,51,0	0/0:21,0:21:57.18:0,57,2036	0/0:20,0:20:54.19:0,54,2084	1/1:6,12:21:45.15:2852,45,0	1/1:16,13:33:93.28:5293,93,0	1/1:9,16:27:78.27:5084,78,0	1/1:2,5:7:21.07:1481,21,0
chr10	36044324	.	GTC	G	435.79	PASS	AC=2;AF=0.037;AN=54;BaseQRankSum=4.307;DP=644;FS=2.079;HRun=0;HaplotypeScore=106.0029;InbreedingCoeff=0.9417;MQ=61.56;MQ0=17;MQRankSum=0.184;QD=17.43;ReadPosRankSum=1.684;VQSLOD=3.9128;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,23:24:41.15:530,41,0	./.	0/0:30,0:17:18.49:0,18,225	0/0:56,0:25:13.79:0,14,253	0/0:24,0:24:60.15:0,60,912	0/0:23,0:23:33.11:0,33,549	0/0:17,0:17:39.12:0,39,606	0/0:46,0:46:95.65:0,96,1659	0/0:19,0:19:36.12:0,36,598	0/0:29,0:29:67.99:0,68,1075	0/0:18,0:18:26.91:0,27,387	0/0:30,1:31:40.07:0,40,1160	0/0:10,0:10:21.06:0,21,326	0/0:17,0:17:27.08:0,27,426	0/0:19,0:19:30.09:0,30,471	0/0:18,0:18:39.13:0,39,631	0/0:20,0:20:50.52:0,51,800	0/0:17,0:17:36.12:0,36,559	0/0:12,0:11:24.08:0,24,350	0/0:26,0:25:42.11:0,42,674	0/0:19,0:17:18.06:0,18,294	0/0:25,0:25:42.14:0,42,691	0/0:24,0:23:51.11:0,51,772	0/0:32,0:31:78.21:0,78,1232	0/0:24,0:24:33.10:0,33,516	0/0:26,0:25:67.07:0,67,1021	0/0:19,0:18:38.64:0,39,521	0/0:12,0:11:15.05:0,15,226
chr10	36044377	.	TGC	T	4077.89	PASS	AB=0.746;AC=31;AF=0.574;AN=54;BaseQRankSum=9.407;DP=666;FS=30.833;HRun=0;HaplotypeScore=132.1872;InbreedingCoeff=0.3305;MQ=50.99;MQ0=30;MQRankSum=-3.945;QD=10.09;ReadPosRankSum=-2.141;VQSLOD=1.5285;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:30,1:30:15.45:180,0,15	0/1:4,8:12:8.79:111,0,9	0/0:30,0:5:9.39:0,9,81	0/0:53,0:18:19.82:0,20,218	0/0:22,15:34:33.09:0,33,481	0/1:2,21:22:0:0,0,0	1/1:1,15:16:0.34:1,0,0	1/1:14,11:23:6.61:532,7,0	0/1:16,8:24:11.74:12,0,301	1/1:4,22:26:1.02:599,1,0	./.	0/0:25,0:25:48.14:0,48,1241	0/1:7,5:11:0.68:181,0,1	1/1:10,8:17:21.06:278,21,0	1/1:4,18:21:2.99:32,3,0	0/1:18,8:26:26.98:27,0,482	0/1:9,1:9:34.01:34,0,233	1/1:11,3:14:6.18:291,6,0	1/1:2,12:12:10.24:331,10,0	0/0:3,25:27:0.88:0,1,4	0/0:5,9:12:2.98:0,3,22	1/1:2,28:28:3:32,3,0	0/0:25,0:24:57.17:0,57,951	0/0:27,0:26:75.25:0,75,1320	1/1:4,24:27:3.01:32,3,0	1/1:2,37:36:68.43:1077,68,0	1/1:2,21:22:18.25:252,18,0	1/1:1,10:8:6.02:75,6,0
chr10	36044413	.	CCTCT	C	9106.18	PASS	AB=0.944;AC=37;AF=0.661;AN=56;BaseQRankSum=0.400;DP=651;FS=16.656;HRun=0;HaplotypeScore=143.9659;InbreedingCoeff=0.3825;MQ=72.71;MQ0=15;MQRankSum=-1.228;QD=21.84;ReadPosRankSum=-1.548;VQSLOD=2.9980;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:49.81:0,50,926	1/1:7,1:8:24.07:343,24,0	0/0:46,0:28:52.78:0,53,1016	0/0:69,0:32:1.48:0,1,492	1/1:27,0:25:31.80:360,32,0	1/1:23,0:22:44.44:586,44,0	1/1:16,0:16:32.98:430,33,0	0/1:13,24:37:50.14:952,0,50	1/1:20,0:20:41.77:384,42,0	1/1:23,0:23:4.29:739,4,0	1/1:12,0:11:17.43:161,17,0	0/0:32,0:32:81.25:0,81,1756	0/1:16,0:14:19.45:361,0,19	1/1:20,0:19:50.93:615,51,0	1/1:19,0:19:23.63:354,24,0	0/1:23,0:23:80.39:270,0,80	0/1:12,0:11:59.16:160,0,59	0/1:16,0:16:99:205,0,112	0/1:15,0:13:10.63:410,0,11	1/1:15,0:14:32.90:417,33,0	1/1:17,0:17:39.02:590,39,0	1/1:27,0:25:38.04:504,38,0	0/0:25,0:24:54.11:0,54,1054	0/0:34,0:33:81.67:0,82,1679	1/1:20,0:19:29.69:377,30,0	1/1:24,0:24:27.88:483,28,0	0/1:16,0:14:5.71:143,0,6	1/1:11,0:9:3.35:261,3,0
chr10	36044656	.	AC	A	1578.48	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=9.871;DP=693;FS=5.620;HRun=3;HaplotypeScore=71.6720;InbreedingCoeff=0.9976;MQ=87.62;MQ0=0;MQRankSum=-2.866;QD=30.95;ReadPosRankSum=0.662;VQSLOD=3.5033;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,48:51:99:1673,135,0	0/0:8,0:8:24.08:0,24,345	0/0:29,0:29:81.10:0,81,1108	0/0:29,0:29:81.18:0,81,1071	0/0:32,0:32:84.26:0,84,1186	0/0:23,0:23:69.23:0,69,992	0/0:31,0:31:90.30:0,90,1294	0/0:29,0:29:75.25:0,75,1072	0/0:31,0:31:90.29:0,90,1276	0/0:16,0:16:48.15:0,48,673	0/0:14,0:14:39.13:0,39,553	0/0:28,0:28:81.27:0,81,1166	0/0:28,0:28:78.24:0,78,1086	0/0:23,0:23:69.23:0,69,988	0/0:30,0:30:84.28:0,84,1205	0/0:22,0:22:66.22:0,66,950	0/0:19,0:19:57.16:0,57,792	0/0:14,0:14:42.14:0,42,605	0/0:26,0:26:72.24:0,72,1033	0/0:27,0:27:81.27:0,81,1157	0/0:26,0:26:78.21:0,78,1077	0/0:27,0:27:75.25:0,75,1075	0/0:30,0:30:90.30:0,90,1293	0/0:33,0:33:96.30:0,96,1361	0/0:13,0:13:36.12:0,36,518	0/0:27,0:27:78.24:0,78,1080	0/0:15,0:14:45.15:0,45,647	0/0:12,0:12:36.12:0,36,514
chr10	36047098	.	TTCTC	T	364.93	PASS	AB=0.940;AC=10;AF=0.185;AN=54;BaseQRankSum=3.775;DP=516;FS=10.167;HRun=0;HaplotypeScore=104.5918;InbreedingCoeff=0.1223;MQ=70.66;MQ0=23;MQRankSum=-0.876;QD=2.72;ReadPosRankSum=0.211;VQSLOD=0.7667;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:21,0:22:43.08:74,0,43	0/1:12,0:12:18.74:28,0,19	./.	0/0:34,0:16:4.22:0,4,24	0/0:16,1:17:14.68:0,15,89	0/1:22,0:22:2.06:2,0,121	0/0:24,0:22:10.60:0,11,155	0/0:39,0:38:17.64:0,18,124	1/1:10,7:16:22.25:310,22,0	0/1:21,0:20:5.18:5,0,93	0/0:14,0:14:5.99:0,6,50	0/0:14,0:15:26.82:0,27,464	0/0:8,0:8:2.65:0,3,100	0/0:7,0:7:3.01:0,3,31	0/0:24,0:22:30.37:0,30,399	0/1:7,9:12:23.94:55,0,24	1/1:6,8:12:4.97:18,5,0	0/0:14,0:11:8.26:0,8,56	0/0:14,0:11:0.25:0,0,95	0/0:10,0:9:13.28:0,13,112	0/0:16,0:16:4.33:0,4,15	0/0:22,0:22:10.27:0,10,136	0/0:10,0:10:14.76:0,15,173	0/0:27,3:28:39.07:0,39,680	0/0:15,0:15:7.82:0,8,117	0/0:12,0:14:21.39:0,21,214	0/1:10,0:8:7.37:7,0,102	0/0:18,0:18:17.86:0,18,151
chr10	36047143	.	TCC	T	2166.15	PASS	AB=0.969;AC=23;AF=0.411;AN=56;BaseQRankSum=4.858;DP=512;FS=22.182;HRun=3;HaplotypeScore=91.4490;InbreedingCoeff=0.0880;MQ=45.54;MQ0=56;MQRankSum=2.548;QD=6.73;ReadPosRankSum=1.598;VQSLOD=-0.7471;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:22:9.22:9,0,44	1/1:7,1:8:14.40:110,14,0	0/0:4,0:1:2.99:0,3,23	0/0:8,0:3:5.72:0,6,79	0/0:18,0:15:14.90:0,15,244	1/1:25,1:22:38.62:301,39,0	0/1:25,0:19:64.74:65,0,117	0/1:25,0:15:58.52:90,0,59	0/0:16,0:15:32.80:0,33,465	0/1:10,11:16:16.06:208,0,16	0/0:7,10:15:0.47:0,0,1	0/0:26,0:23:57.03:0,57,871	0/1:10,0:10:55.94:68,0,56	1/1:13,0:11:20.47:144,20,0	0/1:25,0:24:99:165,0,276	0/0:25,0:19:35.21:0,35,547	0/0:22,0:18:35.83:0,36,572	1/1:16,0:11:23.30:178,23,0	0/1:9,0:7:39.80:108,0,40	1/1:21,0:19:1.99:135,2,0	1/1:24,0:19:23.14:175,23,0	0/1:16,0:15:44.76:102,0,45	0/0:10,1:9:4.92:0,5,30	0/0:33,0:31:69.17:0,69,1139	0/0:9,0:9:4.53:0,5,49	0/1:23,0:22:99:194,0,205	0/1:20,0:17:7.77:202,0,8	0/1:14,0:12:60.30:91,0,60
chr10	36047918	.	T	TG	712.79	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-7.659;DP=668;FS=0.763;HRun=8;HaplotypeScore=68.5073;InbreedingCoeff=0.9785;MQ=85.72;MQ0=0;MQRankSum=-4.308;QD=17.39;ReadPosRankSum=1.504;VQSLOD=3.6871;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,30:41:52.15:808,52,0	0/0:11,0:11:21.01:0,21,192	0/0:22,1:23:41.60:0,42,384	0/0:26,0:26:41.87:0,42,374	0/0:16,0:16:29.99:0,30,275	0/0:21,0:21:54:0,54,488	0/0:38,0:39:99:0,110,989	0/0:21,0:21:33:0,33,302	0/0:23,0:23:66.02:0,66,599	0/0:21,0:21:57.02:0,57,519	0/0:15,0:15:33.01:0,33,302	0/0:36,0:36:90.04:0,90,823	0/0:21,0:21:50.99:0,51,461	0/0:24,0:24:53.95:0,54,481	0/0:32,0:32:71.98:0,72,649	0/0:16,0:16:45.02:0,45,412	0/0:23,0:23:54.01:0,54,494	0/0:22,0:22:59.97:0,60,541	0/0:14,0:14:30:0,30,274	0/0:26,0:26:59.99:0,60,540	0/0:47,0:47:98.95:0,99,895	0/0:23,2:25:31.40:0,31,537	0/0:25,0:25:50.99:0,51,462	0/0:29,0:29:72.03:0,72,659	0/0:18,0:18:51.02:0,51,466	0/0:22,0:22:60.03:0,60,549	0/0:26,0:26:53.97:0,54,489	0/0:5,0:5:15.01:0,15,137
chr10	36048758	.	TGC	T	4301.50	PASS	AB=0.541;AC=42;AF=0.778;AN=54;BaseQRankSum=6.258;DP=474;FS=3.684;HRun=0;HaplotypeScore=69.5938;InbreedingCoeff=0.7228;MQ=75.25;MQ0=6;MQRankSum=-1.294;QD=12.25;ReadPosRankSum=1.375;VQSLOD=4.3614;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:2,24:26:0:0,0,0	1/1:1,0:1:2.99:24,3,0	0/0:27,0:16:9.32:0,9,209	0/0:26,0:17:15.64:0,16,220	1/1:9,0:9:23.94:192,24,0	1/1:1,12:14:11.87:134,12,0	1/1:30,0:29:74.49:603,74,0	1/1:0,0:14:41.90:338,42,0	1/1:1,16:18:8.90:98,9,0	1/1:0,1:12:35.87:299,36,0	./.	0/0:16,0:16:22.51:0,23,192	1/1:7,2:9:21.34:192,21,0	1/1:0,20:21:17.93:224,18,0	0/1:4,13:17:10.27:75,0,10	1/1:3,12:15:14.88:181,15,0	1/1:0,19:20:11.87:140,12,0	1/1:15,1:18:31.90:362,32,0	1/1:1,0:16:44.88:361,45,0	1/1:3,12:15:8.86:98,9,0	1/1:5,36:40:3.01:41,3,0	1/1:12,0:12:26.95:221,27,0	0/0:10,0:10:13:0,13,138	0/0:32,0:32:53.56:0,54,477	1/1:0,12:12:9.03:125,9,0	1/1:9,1:10:23.95:212,24,0	1/1:15,0:16:37.91:293,38,0	1/1:3,0:3:9:88,9,0
chr10	36049355	.	TGCGCGC	T	6312.27	PASS	AB=0.790;AC=43;AF=0.796;AN=54;BaseQRankSum=1.280;DP=368;FS=6.665;HRun=0;HaplotypeScore=115.3111;InbreedingCoeff=0.4575;MQ=50.66;MQ0=9;MQRankSum=0.050;QD=21.04;ReadPosRankSum=-0.502;VQSLOD=3.4793;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:36,3:38:50.21:762,50,0	1/1:11,2:13:11.43:299,11,0	./.	0/0:13,0:5:2.58:0,3,15	1/1:15,2:17:15.05:322,15,0	1/1:20,1:21:35.89:669,36,0	1/1:23,2:22:26.59:530,27,0	1/1:1,11:11:30.06:468,30,0	1/1:5,0:5:3.76:48,4,0	1/1:8,2:10:4.24:218,4,0	1/1:7,2:9:3.48:70,3,0	0/0:13,0:13:36.12:0,36,900	1/1:6,1:7:12.04:272,12,0	1/1:3,1:4:3.01:67,3,0	1/1:5,1:6:12.03:231,12,0	1/1:2,0:2:3.01:48,3,0	0/1:14,2:17:11.52:238,0,12	0/1:5,7:12:33.35:48,0,33	1/1:5,7:10:19.36:278,19,0	1/1:15,2:17:7.47:205,7,0	1/1:15,0:14:18.06:390,18,0	1/1:14,2:14:12.93:275,13,0	0/0:18,0:18:48.16:0,48,1338	0/0:20,0:20:48.12:0,48,1286	1/1:10,2:12:13.74:167,14,0	1/1:8,0:6:7.81:144,8,0	1/1:10,2:12:14.08:254,14,0	0/1:7,1:7:3.80:311,0,4
chr10	36051735	.	TG	T	1912.55	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=9.755;DP=733;FS=0.501;HRun=5;HaplotypeScore=71.3770;InbreedingCoeff=0.9989;MQ=78.40;MQ0=0;MQRankSum=-5.099;QD=30.85;ReadPosRankSum=0.179;VQSLOD=4.1096;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,60:62:99:2007,178,0	0/0:10,0:10:30.10:0,30,408	0/0:21,0:21:53.53:0,54,674	0/0:21,0:21:40.02:0,40,505	0/0:29,0:29:75.23:0,75,1006	0/0:20,0:20:60.19:0,60,804	0/0:21,0:21:60.18:0,60,801	0/0:28,0:28:75.23:0,75,995	0/0:38,0:38:99:0,105,1431	0/0:25,0:25:66.20:0,66,862	0/0:19,0:19:57.19:0,57,779	0/0:35,0:35:99:0,105,1422	0/0:30,0:30:84.24:0,84,1123	0/0:29,0:29:78.23:0,78,1029	0/0:37,0:37:99:0,111,1499	0/0:24,0:24:72.23:0,72,966	0/0:27,0:27:81.27:0,81,1108	0/0:18,0:18:54.16:0,54,718	0/0:25,0:25:75.22:0,75,989	0/0:21,0:21:60.17:0,60,786	0/0:30,0:30:90.29:0,90,1214	0/0:27,0:27:78.26:0,78,1054	0/0:23,0:23:69.23:0,69,940	0/0:26,0:26:78.26:0,78,1063	0/0:22,0:22:57.17:0,57,761	0/0:23,0:23:69.21:0,69,915	0/0:32,0:32:96.32:0,96,1304	0/0:10,0:10:30.10:0,30,410
chr10	36054231	.	ACAACAGCAG	A	5124.93	PASS	AB=1.000;AC=27;AF=0.482;AN=56;BaseQRankSum=-4.460;DP=672;FS=3.552;HRun=0;HaplotypeScore=167.3962;InbreedingCoeff=-0.2283;MQ=60.06;MQ0=26;MQRankSum=-0.252;QD=9.51;ReadPosRankSum=-5.106;VQSLOD=1.6673;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:22:99:206,0,237	0/1:10,0:10:22.77:23,0,522	0/0:21,0:16:45.12:0,45,730	0/0:22,0:17:24.12:0,24,661	1/1:1,10:11:4.27:66,4,0	0/1:19,0:15:99:103,0,487	0/1:26,0:25:85.86:86,0,1152	0/1:33,0:23:99:231,0,314	1/1:3,43:46:57.10:1623,57,0	0/1:15,0:11:99:116,0,148	0/1:9,0:7:24.40:82,0,24	0/0:33,0:33:96.24:0,96,3051	0/1:38,0:38:38.53:39,0,2551	0/1:22,0:22:6.63:7,0,1545	0/1:36,0:36:99:126,0,2078	1/1:1,33:34:39.13:1112,39,0	1/1:2,40:42:12.04:307,12,0	0/1:26,0:26:23.65:24,0,1753	0/1:21,0:18:99:177,0,186	1/1:14,0:13:29.90:240,30,0	0/1:41,0:39:99:181,0,1193	0/1:16,0:16:99:181,0,266	0/0:18,0:18:42.25:0,42,677	0/0:31,0:30:87.19:0,87,2979	0/1:11,0:11:31.82:32,0,198	0/1:12,0:11:34.05:136,0,34	0/1:33,0:33:29.02:29,0,1874	0/0:8,0:8:24.08:0,24,843
chr10	36054510	.	G	GAAA	9349.98	PASS	AB=0.581;AC=42;AF=0.750;AN=56;BaseQRankSum=-0.889;DP=589;FS=1.672;HRun=13;HaplotypeScore=100.8195;InbreedingCoeff=0.5910;MQ=61.64;MQ0=2;MQRankSum=-3.829;QD=19.64;ReadPosRankSum=0.628;VQSLOD=4.0094;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,30:50:81:1086,81,0	0/1:4,4:11:12.38:170,0,12	0/0:27,0:17:23.54:0,24,205	0/0:17,0:9:15.40:0,15,149	1/1:8,0:19:9.95:80,10,0	1/1:6,15:27:54.06:794,54,0	1/1:5,8:17:24:323,24,0	1/1:18,15:34:54.60:803,55,0	1/1:6,0:19:21.56:68,22,0	1/1:13,9:22:27.31:549,27,0	1/1:6,7:17:33.05:502,33,0	0/0:16,0:18:37.35:0,37,399	1/1:6,12:19:15.66:271,16,0	1/1:6,7:14:15.05:250,15,0	1/1:6,1:10:6:77,6,0	0/1:2,0:12:20.04:20,0,63	0/1:6,0:31:28.05:63,0,28	1/1:4,5:19:27.01:359,27,0	1/1:5,12:20:51.33:669,51,0	1/1:4,11:21:44.91:575,45,0	0/1:3,7:10:23.28:98,0,23	1/1:4,1:24:49.88:575,50,0	0/0:20,0:22:35.90:0,36,414	0/0:24,0:27:57.55:0,58,625	1/1:4,15:23:42.12:705,42,0	1/1:4,11:19:39.07:560,39,0	1/1:11,9:25:40.19:484,40,0	1/1:3,4:7:15.05:267,15,0
chr10	36055041	.	ACT	A	2963.01	PASS	AB=0.956;AC=31;AF=0.554;AN=56;BaseQRankSum=11.010;DP=785;FS=57.949;HRun=0;HaplotypeScore=278.9360;InbreedingCoeff=0.6580;MQ=56.72;MQ0=14;MQRankSum=-11.137;QD=6.78;ReadPosRankSum=-7.426;VQSLOD=0.1234;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:33:71.90:0,72,1173	0/1:16,0:15:17.32:77,0,17	0/0:36,0:18:28:0,28,391	0/0:71,1:32:46.22:0,46,503	0/0:23,0:23:69.24:0,69,1186	1/1:23,2:25:38.33:364,38,0	1/1:24,3:23:0.44:74,0,0	1/1:50,7:47:36.80:465,37,0	0/0:30,0:30:81.28:0,81,1387	1/1:38,1:38:39.57:410,40,0	0/1:18,1:19:2.35:31,0,2	0/0:40,0:40:99:0,117,2011	1/1:30,1:31:27:377,27,0	1/1:14,0:13:3.48:130,3,0	1/1:20,1:21:10.09:106,10,0	0/0:29,0:29:75.26:0,75,1293	0/0:22,0:22:57.19:0,57,962	0/0:5,0:5:2.60:0,3,6	0/1:20,2:16:14.73:71,0,15	1/1:23,3:26:12.53:140,13,0	1/1:22,1:22:2.69:20,3,0	1/1:26,2:29:12.98:106,13,0	0/0:23,0:23:63.17:0,63,1050	0/0:34,0:34:81.26:0,81,1358	1/1:26,2:28:27.74:248,28,0	1/1:23,4:26:39:361,39,0	1/1:22,1:22:3.53:119,4,0	1/1:8,1:8:5.12:65,5,0
chr10	36055043	.	T	TCA	3406.51	PASS	AB=0.850;AC=21;AF=0.375;AN=56;BaseQRankSum=15.245;DP=795;FS=15.788;HRun=0;HaplotypeScore=288.5723;InbreedingCoeff=-0.1165;MQ=55.43;MQ0=14;MQRankSum=-14.036;QD=7.60;ReadPosRankSum=-1.368;VQSLOD=1.9697;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,1:32:80.71:0,81,1113	0/1:15,3:17:20.76:108,0,21	0/0:40,0:20:37.24:0,37,499	0/0:73,0:33:46.15:0,46,470	0/0:23,0:23:69.23:0,69,1053	0/1:19,6:25:79.53:230,0,80	0/1:23,4:23:30.51:98,0,31	0/1:54,2:46:99:110,0,431	0/0:30,0:30:87.27:0,87,1281	0/1:25,15:40:39.04:785,0,39	0/1:15,3:19:7.62:8,0,40	0/0:39,0:39:99:0,117,1780	0/1:24,9:33:7.64:499,0,8	0/1:9,5:13:5.96:198,0,6	1/1:17,5:22:15.67:132,16,0	0/0:29,0:29:78.25:0,78,1168	0/0:22,0:22:63.18:0,63,916	1/1:6,0:6:4.05:30,4,0	0/1:20,0:14:48.36:120,0,48	0/1:20,7:27:23.07:23,0,73	0/1:22,0:21:1.79:2,0,41	0/1:30,1:31:10.22:30,0,10	0/0:23,0:23:62.91:0,63,936	0/0:35,0:35:84.25:0,84,1238	0/1:18,8:26:5.84:197,0,6	0/1:18,9:26:36.52:559,0,37	1/1:20,4:23:2.16:237,2,0	0/1:8,1:8:40.50:41,0,69
chr10	36055045	.	T	TCTCA	9757.21	PASS	AB=0.686;AC=33;AF=0.589;AN=56;BaseQRankSum=13.067;DP=787;FS=33.951;HRun=0;HaplotypeScore=288.2036;InbreedingCoeff=0.7599;MQ=56.13;MQ0=13;MQRankSum=-12.283;QD=22.23;ReadPosRankSum=-2.749;VQSLOD=3.0575;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:72.21:0,72,1297	1/1:8,10:17:30.28:678,30,0	0/0:42,0:22:29.06:0,29,443	0/0:74,0:34:43.13:0,43,511	0/0:24,0:24:69.24:0,69,1293	1/1:16,8:24:34.50:518,34,0	1/1:19,9:23:13.76:127,14,0	1/1:49,6:45:99:1505,103,0	0/0:28,0:28:81.28:0,81,1511	1/1:26,12:37:83.18:1402,83,0	1/1:10,8:19:5.42:156,5,0	0/0:39,0:39:99:0,117,2184	1/1:21,10:32:63.69:1000,64,0	1/1:10,3:12:15.65:86,16,0	1/1:14,7:22:2.27:304,2,0	0/0:29,0:29:78.25:0,78,1438	0/0:23,0:23:60.16:0,60,1070	0/1:2,4:6:4.62:305,0,5	0/1:15,3:14:14.34:331,0,14	1/1:16,11:27:22.71:338,23,0	0/1:7,14:20:3.55:73,0,4	1/1:14,18:32:6.60:412,7,0	0/0:23,0:23:63.17:0,63,1140	0/0:36,0:36:93.16:0,93,1561	1/1:14,11:25:25.39:480,25,0	1/1:21,7:27:65.84:879,66,0	1/1:13,11:23:27.67:784,28,0	1/1:6,3:8:20.56:380,21,0
chr10	36055047	.	TCTCA	T	1987.19	PASS	AB=0.956;AC=16;AF=0.286;AN=56;BaseQRankSum=11.176;DP=794;FS=65.175;HRun=0;HaplotypeScore=314.5328;InbreedingCoeff=-0.2079;MQ=55.61;MQ0=14;MQRankSum=-11.637;QD=5.39;ReadPosRankSum=-0.390;VQSLOD=0.3412;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:69:0,69,1785	0/1:19,0:18:70.69:71,0,141	0/0:40,0:19:38.37:0,38,672	0/0:77,0:35:38.98:0,39,624	0/0:25,0:25:75.09:0,75,1868	1/1:21,2:23:5.71:167,6,0	0/1:28,0:23:3.34:20,0,3	0/1:41,10:42:99:632,0,187	0/0:29,0:29:84.26:0,84,2101	0/1:39,2:40:99:213,0,442	0/0:18,1:19:7.80:0,8,24	0/0:42,0:42:99:0,126,3159	0/1:28,3:31:84.66:223,0,85	0/1:11,2:12:10.60:71,0,11	0/1:22,1:23:25.89:26,0,56	0/0:29,0:29:81.26:0,81,2075	0/0:23,0:23:60.21:0,60,1507	0/1:6,0:6:7.89:8,0,57	0/1:18,0:14:71.39:71,0,77	0/1:26,2:28:34.09:46,0,34	0/0:19,0:18:3.43:0,3,9	0/0:31,2:33:10.57:0,11,57	0/0:24,0:24:60.21:0,60,1568	0/0:35,0:35:96.27:0,96,2253	0/1:27,0:27:17.91:82,0,18	0/1:27,1:27:99:146,0,227	0/1:21,1:22:99:261,0,133	0/1:9,0:8:72.40:110,0,72
chr10	36055054	.	C	CA	5598.15	PASS	AB=0.697;AC=27;AF=0.482;AN=56;BaseQRankSum=13.305;DP=771;FS=65.184;HRun=0;HaplotypeScore=274.5792;InbreedingCoeff=0.2933;MQ=59.28;MQ0=12;MQRankSum=-13.690;QD=13.79;ReadPosRankSum=-2.337;VQSLOD=1.9654;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,1:28:75.14:0,75,1048	0/1:11,7:17:84.72:149,0,85	0/0:43,0:21:41.61:0,42,545	0/0:85,0:41:61.30:0,61,694	0/0:27,0:27:75.24:0,75,1032	1/1:10,10:22:8.52:414,9,0	1/1:11,11:18:11.90:171,12,0	1/1:21,23:34:69.80:910,70,0	0/0:29,0:29:84.19:0,84,1131	0/1:17,22:38:80.73:938,0,81	1/1:11,7:18:0.98:37,1,0	0/0:45,0:45:99:0,135,1870	1/1:16,13:29:33.29:575,33,0	1/1:6,5:11:14.43:203,14,0	1/1:13,10:23:22.76:255,23,0	0/0:29,0:29:84.28:0,84,1174	0/0:21,0:21:60.20:0,60,832	0/1:5,1:6:21.16:51,0,21	0/1:4,6:11:23.44:269,0,23	0/1:14,12:26:14.40:107,0,14	1/1:13,2:15:4.23:26,4,0	0/1:22,10:32:8.30:82,0,8	0/0:22,0:22:63.12:0,63,855	0/0:33,0:33:93.30:0,93,1282	1/1:12,12:25:3.77:273,4,0	0/1:12,16:28:51.31:653,0,51	0/1:14,8:21:13.95:392,0,14	0/1:4,4:7:6.80:92,0,7
chr10	36055070	.	ATT	A	1231.83	PASS	AB=0.803;AC=13;AF=0.232;AN=56;BaseQRankSum=9.368;DP=779;FS=0.000;HRun=2;HaplotypeScore=295.1180;InbreedingCoeff=-0.3093;MQ=66.84;MQ0=6;MQRankSum=-8.701;QD=4.63;ReadPosRankSum=3.016;VQSLOD=-0.7129;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,1:29:72.14:0,72,1404	0/1:12,4:16:63.41:63,0,303	0/0:42,0:25:43.01:0,43,694	0/0:86,0:50:70.12:0,70,988	0/0:26,0:26:78.16:0,78,1449	0/1:14,8:22:33.06:33,0,622	0/0:25,4:23:15.65:0,16,640	0/1:36,8:37:99:266,0,1330	0/0:32,0:32:96.21:0,96,1780	0/1:28,6:33:99:227,0,1128	0/0:12,5:17:8.03:0,8,66	0/0:46,0:46:99:0,138,2589	0/1:19,8:27:99:176,0,838	0/1:9,4:13:27.94:28,0,345	0/1:19,5:24:19.12:19,0,652	0/0:39,0:39:99:0,117,1984	0/0:19,0:19:44.53:0,45,907	0/1:1,1:2:31.35:31,0,55	0/1:11,4:15:99:157,0,424	0/0:23,3:26:15.34:0,15,625	0/1:8,1:9:23.50:23,0,66	0/0:22,11:33:50.66:0,51,785	0/0:25,0:25:75.21:0,75,1355	0/0:35,0:35:99:0,105,2033	0/0:19,6:25:12.29:0,12,525	0/1:25,3:27:99:109,0,941	0/1:17,5:21:99:138,0,590	0/1:7,3:9:99:113,0,205
chr10	36055088	.	ACT	A	9880.90	PASS	AB=0.682;AC=34;AF=0.607;AN=56;BaseQRankSum=10.700;DP=768;FS=24.855;HRun=0;HaplotypeScore=267.1176;InbreedingCoeff=0.6834;MQ=68.57;MQ0=6;MQRankSum=-10.328;QD=20.54;ReadPosRankSum=-2.010;VQSLOD=3.2477;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:33:69.13:0,69,1198	0/1:3,11:14:17.79:369,0,18	0/0:40,0:26:45.51:0,46,590	0/1:70,1:45:0.01:0,0,314	0/0:21,0:21:56.93:0,57,958	1/1:6,13:19:23.67:485,24,0	1/1:5,24:24:48.16:643,48,0	1/1:9,38:46:69.29:1357,69,0	0/0:30,0:30:87.30:0,87,1521	1/1:6,27:33:67.59:966,68,0	1/1:5,12:17:8.92:121,9,0	0/0:40,0:40:99:0,108,1801	1/1:9,20:29:47.93:769,48,0	1/1:4,13:17:6.22:295,6,0	1/1:5,25:30:43.30:713,43,0	0/0:35,0:35:96.29:0,96,1597	0/0:22,0:22:64.19:0,64,970	1/1:1,2:3:6.49:81,6,0	0/1:6,12:18:11.09:329,0,11	1/1:5,20:25:52.74:713,53,0	1/1:2,7:8:6.32:183,6,0	1/1:11,23:33:56.84:748,57,0	0/0:23,0:23:60.15:0,60,1040	0/0:42,0:42:99:0,117,1982	1/1:4,21:25:48.16:648,48,0	0/1:8,21:28:12.96:781,0,13	1/1:7,15:21:6.55:483,7,0	1/1:3,6:9:10.66:196,11,0
chr10	36055093	.	CTCTT	C	341.70	PASS	AB=0.888;AC=9;AF=0.161;AN=56;BaseQRankSum=9.305;DP=774;FS=1.223;HRun=0;HaplotypeScore=320.4844;InbreedingCoeff=-0.2192;MQ=66.46;MQ0=9;MQRankSum=-4.796;QD=1.41;ReadPosRankSum=-3.416;VQSLOD=1.0738;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,1:32:75.17:0,75,1858	0/0:12,2:14:1.80:0,2,156	0/0:35,0:23:45.22:0,45,812	0/1:73,0:43:8.61:9,0,442	0/0:19,0:19:57.20:0,57,1499	0/1:19,2:21:23.38:23,0,202	0/0:27,0:22:52.79:0,53,322	0/0:41,1:41:46.30:0,46,604	0/0:32,0:32:96.32:0,96,2414	0/1:33,4:37:75.19:75,0,457	0/0:15,4:19:35.17:0,35,218	0/0:38,0:38:99:0,108,2684	0/1:26,5:31:99:126,0,308	0/1:13,3:16:29.77:30,0,164	0/0:28,4:32:9.92:0,10,434	0/0:34,0:34:99:0,102,2560	0/0:24,0:24:41.84:0,42,1368	0/1:2,1:3:26.02:37,0,26	0/0:15,0:15:7.90:0,8,173	0/0:27,2:29:7.56:0,8,331	0/0:10,0:9:1.09:0,1,91	0/0:33,3:35:70.20:0,70,428	0/0:23,0:23:63.22:0,63,1652	0/0:42,0:42:99:0,120,3000	0/0:25,0:25:61.63:0,62,375	0/1:27,2:28:29.31:29,0,375	0/1:21,3:23:99:121,0,244	0/1:8,1:9:28.21:28,0,68
chr10	36055143	.	ACTCTTTCTCACT	A	6629.95	PASS	AB=0.992;AC=37;AF=0.661;AN=56;BaseQRankSum=6.811;DP=668;FS=5.613;HRun=0;HaplotypeScore=253.8117;InbreedingCoeff=0.8050;MQ=58.02;MQ0=14;MQRankSum=-7.849;QD=19.85;ReadPosRankSum=0.008;VQSLOD=3.3970;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:77.24:0,77,2673	1/1:7,0:7:8.20:83,8,0	0/0:74,0:20:39.77:0,40,807	0/1:117,0:31:23.22:23,0,363	0/0:25,0:25:58.41:0,58,2008	1/1:7,3:10:27.50:471,27,0	1/1:15,0:11:12:141,12,0	1/1:18,0:16:22.97:179,23,0	0/0:41,0:41:95.43:0,95,3425	1/1:18,5:23:53.10:1220,53,0	1/1:5,6:11:17.95:311,18,0	0/0:32,0:32:87.24:0,87,3839	1/1:8,5:13:20.77:589,21,0	1/1:6,3:9:21:429,21,0	1/1:15,5:20:33.10:556,33,0	0/0:49,0:49:99:0,109,3576	0/0:22,0:21:39.31:0,39,1996	1/1:0,1:1:3.01:55,3,0	1/1:12,1:12:3.90:109,4,0	1/1:5,4:9:18.06:357,18,0	1/1:7,0:6:3:25,3,0	1/1:12,5:16:33.81:524,34,0	0/0:19,0:19:52.42:0,52,2794	0/0:39,0:39:99:0,99,4332	1/1:7,4:11:24.06:379,24,0	1/1:13,4:15:35.84:564,36,0	1/1:9,4:12:25.37:596,25,0	1/1:2,0:2:2.96:19,3,0
chr10	36055161	.	T	TCA	2665.45	PASS	AB=0.993;AC=30;AF=0.600;AN=50;BaseQRankSum=5.602;DP=581;FS=1.813;HRun=0;HaplotypeScore=175.6447;InbreedingCoeff=0.5621;MQ=61.47;MQ0=16;MQRankSum=-5.780;QD=8.46;ReadPosRankSum=-2.547;VQSLOD=3.2070;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,36:38:75.05:1435,75,0	0/1:5,0:5:5.92:44,0,6	0/0:68,0:23:0.38:0,0,194	0/1:109,0:32:37.17:37,0,126	0/0:28,0:28:13.19:0,13,692	1/1:8,0:8:20.51:122,21,0	1/1:3,0:3:5.87:34,6,0	./.	0/0:42,0:42:45.96:0,46,1119	0/1:15,0:15:30.39:59,0,30	1/1:11,0:11:20.53:122,21,0	0/0:36,0:36:99:0,99,1251	1/1:7,0:7:20.19:113,20,0	1/1:7,0:7:17.37:102,17,0	1/1:14,0:14:32.21:190,32,0	0/1:48,0:48:5.85:6,0,1278	0/0:23,0:22:25.53:0,26,745	0/0:2,0:2:3.38:0,3,11	1/1:3,0:3:2.68:12,3,0	1/1:7,0:7:18.88:110,19,0	./.	1/1:10,0:9:23.43:138,23,0	0/0:24,0:24:69.09:0,69,897	0/0:33,0:33:63.71:0,64,1151	1/1:8,0:8:20.54:125,21,0	1/1:11,0:10:5.62:100,6,0	1/1:8,0:8:18.71:99,19,0	./.
chr10	36055174	.	CAT	C	512.52	PASS	AB=0.942;AC=21;AF=0.457;AN=46;BaseQRankSum=6.302;DP=477;FS=9.859;HRun=0;HaplotypeScore=161.7587;InbreedingCoeff=0.5913;MQ=66.70;MQ0=9;MQRankSum=-4.820;QD=3.85;ReadPosRankSum=0.099;VQSLOD=2.2435;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:89.91:0,90,1646	0/0:1,0:1:3.01:0,3,35	0/0:49,1:20:9.42:0,9,419	0/1:76,1:24:49.43:49,0,166	0/0:28,0:28:61.79:0,62,962	1/1:3,0:3:2.37:8,2,0	./.	./.	0/0:43,0:43:53.53:0,54,1500	1/1:6,1:7:18.87:136,19,0	0/0:6,0:6:0:0,0,0	0/0:40,0:40:99:0,100,2175	1/1:5,1:6:14.70:152,15,0	1/1:3,2:5:6.02:81,6,0	0/1:6,1:7:0:0,0,0	0/0:45,0:45:73.28:0,73,1728	0/0:27,0:26:72.16:0,72,1200	1/1:2,0:2:3:30,3,0	0/1:3,0:3:3.94:4,0,14	1/1:5,0:5:0.52:2,1,0	1/1:4,0:3:2.04:6,2,0	./.	0/0:22,0:22:63.22:0,63,1275	0/0:33,0:33:87.26:0,87,1643	./.	1/1:5,1:4:8.66:80,9,0	1/1:5,0:5:11.42:118,11,0	./.
chr10	36055193	.	ACT	A	136.90	PASS	AB=0.972;AC=17;AF=0.354;AN=48;BaseQRankSum=5.865;DP=443;FS=1.024;HRun=0;HaplotypeScore=153.3346;InbreedingCoeff=0.4554;MQ=60.36;MQ0=2;MQRankSum=-3.428;QD=1.30;ReadPosRankSum=-1.827;VQSLOD=2.5625;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:75.26:0,75,1283	0/0:1,0:2:0.47:0,0,1	0/0:31,0:17:26.42:0,26,343	0/1:57,1:17:2.58:3,0,97	0/0:26,0:26:16.66:0,17,349	0/0:3,0:3:2.22:0,2,7	./.	1/1:3,1:2:3.01:36,3,0	0/0:40,0:40:56.10:0,56,851	0/0:6,0:6:7.20:0,7,29	0/1:6,0:6:0:0,0,0	0/0:45,0:45:93.22:0,93,1908	0/1:6,1:7:9.74:37,0,10	1/1:4,0:4:3:29,3,0	0/1:3,0:3:0:0,0,0	0/0:41,0:41:59.11:0,59,917	0/0:32,0:31:55.80:0,56,827	1/1:2,1:3:3.01:38,3,0	1/1:2,0:2:3:28,3,0	1/1:6,1:7:5.93:66,6,0	0/0:4,0:4:2.37:0,2,8	./.	0/0:27,0:27:78.26:0,78,1329	0/0:33,0:34:82.48:0,82,1325	./.	1/1:4,1:4:2.60:18,3,0	0/1:5,0:5:4.77:17,0,5	./.
chr10	36055199	.	T	TCA	317.08	PASS	AB=0.981;AC=26;AF=0.481;AN=54;BaseQRankSum=7.781;DP=454;FS=11.289;HRun=0;HaplotypeScore=155.3400;InbreedingCoeff=0.4655;MQ=53.94;MQ0=8;MQRankSum=-5.962;QD=2.31;ReadPosRankSum=-4.088;VQSLOD=0.7148;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:86.45:0,86,1217	1/1:5,0:5:2.94:18,3,0	0/0:26,0:16:25.59:0,26,320	0/1:50,0:9:6.40:6,0,120	0/0:26,0:26:36.64:0,37,447	0/0:3,0:3:2.60:0,3,10	0/0:2,0:2:0:0,0,0	1/1:5,0:2:3.01:38,3,0	0/0:35,0:35:68.24:0,68,856	0/1:9,0:9:29.15:35,0,29	1/1:3,1:4:1.55:4,2,0	0/0:45,0:45:99:0,129,1812	0/1:7,1:8:4.11:51,0,4	1/1:3,1:4:2.98:39,3,0	0/1:9,0:8:0.11:0,0,0	0/0:43,0:44:69.18:0,69,945	0/0:32,0:31:60.70:0,61,953	1/1:3,1:4:5.85:55,6,0	1/1:4,0:3:5.85:58,6,0	1/1:6,2:8:5.86:91,6,0	1/1:7,0:6:2.04:6,2,0	0/1:7,0:7:0:0,0,0	0/0:29,0:29:84.26:0,84,1240	0/0:34,0:34:84.52:0,85,1199	./.	1/1:5,0:5:10.56:44,11,0	0/1:2,0:2:4.93:8,0,5	1/1:5,0:5:5.49:24,5,0
chr10	36055201	.	TCA	T	106.39	PASS	AB=0.957;AC=23;AF=0.411;AN=56;BaseQRankSum=6.893;DP=434;FS=2.643;HRun=0;HaplotypeScore=147.0728;InbreedingCoeff=0.1505;MQ=53.40;MQ0=8;MQRankSum=-2.537;QD=0.57;ReadPosRankSum=-3.342;VQSLOD=1.6137;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:83.97:0,84,1483	0/1:5,0:5:0.38:4,0,0	0/0:20,0:11:14.96:0,15,206	0/1:45,0:8:0.26:0,0,51	0/1:27,0:27:24.75:25,0,448	1/1:2,0:2:2.60:11,3,0	0/1:2,0:2:0.17:0,0,0	1/1:4,0:2:2.74:12,3,0	0/1:35,0:35:14.43:14,0,930	0/1:10,0:10:10.51:11,0,63	0/0:4,0:4:2.74:0,3,12	0/0:43,0:43:99:0,110,2093	0/1:6,1:7:12.74:41,0,13	0/1:5,0:5:0.33:7,0,0	0/1:8,1:8:0.07:0,0,0	0/0:43,0:43:60.42:0,60,1053	0/0:32,0:31:31.80:0,32,989	0/1:4,0:4:11.39:11,0,12	0/1:2,0:2:7.10:7,0,13	1/1:7,0:7:5.54:29,6,0	0/1:7,0:6:0:1,0,0	0/1:6,0:6:0:0,0,0	0/0:29,0:29:84.23:0,84,1465	0/0:35,0:35:87.10:0,87,1453	0/1:2,0:2:0:0,0,0	0/1:4,1:4:27.38:27,0,39	1/1:1,1:2:3.01:42,3,0	0/0:5,0:5:7.90:0,8,43
chr10	36055209	.	TCA	T	125.47	PASS	AB=0.908;AC=22;AF=0.393;AN=56;BaseQRankSum=6.692;DP=415;FS=13.729;HRun=0;HaplotypeScore=133.7053;InbreedingCoeff=0.4117;MQ=50.96;MQ0=8;MQRankSum=-6.424;QD=1.67;ReadPosRankSum=-2.613;VQSLOD=1.3648;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,105,1737	1/1:4,2:6:0.03:28,0,0	0/0:14,0:6:3.54:0,4,74	0/0:32,1:7:7.97:0,8,54	0/0:27,0:27:44.66:0,45,751	0/1:1,0:1:0:0,0,0	0/1:4,0:4:0.19:0,0,0	0/0:4,0:2:3.01:0,3,32	0/0:34,0:34:68.88:0,69,1235	1/1:6,1:7:11.69:58,12,0	0/0:0,1:1:2.84:0,3,14	0/0:44,0:44:99:0,129,2263	0/1:5,1:6:10.84:12,0,11	1/1:1,4:4:5.88:44,6,0	0/1:7,2:8:0.07:0,0,0	0/0:46,0:46:77.96:0,78,1359	0/0:30,0:29:83.46:0,83,1360	0/1:3,1:4:1.69:2,0,16	1/1:2,1:2:5.20:28,5,0	0/1:2,4:6:5.05:10,0,5	0/1:7,0:6:0:0,0,0	0/1:3,0:3:0:0,0,0	0/0:25,0:25:72.21:0,72,1334	0/0:39,0:39:99:0,103,1778	0/1:2,0:2:0:0,0,0	0/1:6,0:5:23.41:23,0,34	1/1:1,0:1:1.82:5,2,0	1/1:5,0:5:9.01:57,9,0
chr10	36055213	.	TC	T	337.64	PASS	AB=0.864;AC=24;AF=0.444;AN=54;BaseQRankSum=7.949;DP=419;FS=3.798;HRun=1;HaplotypeScore=129.0922;InbreedingCoeff=0.5113;MQ=49.92;MQ0=9;MQRankSum=-7.710;QD=4.63;ReadPosRankSum=-2.318;VQSLOD=-0.3208;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:44:99:0,111,1762	1/1:5,1:6:5.37:34,5,0	0/0:11,0:4:9.50:0,10,125	0/0:33,0:6:2.55:0,3,22	0/0:27,0:27:44.62:0,45,686	0/1:1,0:1:0:0,0,0	1/1:2,2:4:5.94:41,6,0	0/0:3,0:2:2.99:0,3,24	0/0:33,0:33:71.51:0,72,1133	1/1:6,1:7:13.48:68,13,0	0/0:0,1:1:2.84:0,3,14	0/0:46,0:46:99:0,135,2126	1/1:4,1:5:5.11:46,5,0	1/1:1,4:4:8.97:80,9,0	1/1:6,2:7:2.86:21,3,0	0/0:48,0:48:87.19:0,87,1366	0/0:30,0:29:84.18:0,84,1272	0/1:4,1:5:4.90:5,0,17	1/1:1,0:2:5.60:41,6,0	0/1:2,4:6:6.74:48,0,7	1/1:7,0:7:2.92:20,3,0	0/1:2,1:3:0:0,0,0	0/0:23,0:23:65.92:0,66,1055	0/0:44,0:44:99:0,117,1819	0/1:2,0:2:0:0,0,0	0/1:5,0:4:22.73:23,0,29	./.	1/1:5,0:5:10.87:77,11,0
chr10	36055214	.	C	CT	782.53	PASS	AB=0.689;AC=23;AF=0.426;AN=54;BaseQRankSum=7.649;DP=424;FS=3.650;HRun=1;HaplotypeScore=127.9097;InbreedingCoeff=0.4859;MQ=49.81;MQ0=9;MQRankSum=-7.683;QD=10.87;ReadPosRankSum=-2.187;VQSLOD=1.0379;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,112,1547	1/1:2,4:6:6.02:75,6,0	0/0:12,0:5:8.69:0,9,98	0/0:36,0:6:1.17:0,1,15	0/0:26,0:26:41.43:0,41,559	0/0:0,1:1:0:0,0,0	1/1:3,1:4:5.94:41,6,0	0/0:4,0:2:3.01:0,3,33	0/0:34,0:34:74.50:0,74,1018	1/1:1,6:7:15.05:223,15,0	0/0:2,0:2:2.98:0,3,21	0/0:46,0:46:99:0,132,1835	1/1:1,4:5:4.67:82,5,0	1/1:4,1:4:8.98:89,9,0	1/1:4,4:7:2.79:21,3,0	0/0:48,0:48:87.05:0,87,1200	0/0:30,0:29:84.11:0,84,1074	0/1:3,2:5:25.37:39,0,25	1/1:2,1:2:6.02:84,6,0	0/1:5,1:6:8.59:48,0,9	1/1:6,2:7:2.80:20,3,0	0/1:2,1:3:0:0,0,0	0/0:23,0:23:65.92:0,66,923	0/0:44,0:44:99:0,116,1605	0/1:0,2:2:0.01:0,0,0	0/1:2,3:4:30.78:78,0,31	./.	1/1:0,5:5:12.03:151,12,0
chr10	36055217	.	T	TCA	92.24	PASS	AB=0.979;AC=14;AF=0.250;AN=56;BaseQRankSum=7.703;DP=473;FS=1.378;HRun=0;HaplotypeScore=156.7166;InbreedingCoeff=0.3390;MQ=52.65;MQ0=9;MQRankSum=-7.398;QD=0.94;ReadPosRankSum=-5.699;VQSLOD=0.4526;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,111,1662	0/0:9,0:9:6.03:0,6,49	0/0:15,0:7:12.40:0,12,126	0/1:39,0:9:1.88:2,0,3	0/0:26,0:26:42.14:0,42,637	1/1:1,0:1:0.89:2,1,0	1/1:5,0:5:0.93:3,1,0	1/1:7,0:5:3:45,3,0	0/0:35,0:35:78.12:0,78,1150	0/0:12,0:12:22.28:0,22,113	0/0:7,0:7:0.30:0,0,19	0/0:46,0:46:99:0,135,2039	0/0:7,0:7:9.46:0,9,58	0/0:7,0:6:5.54:0,6,39	1/1:8,1:8:3.44:8,3,0	0/0:48,0:48:87.29:0,87,1319	0/0:31,0:30:30.18:0,30,1119	0/1:5,0:5:25.57:43,0,26	0/0:3,0:2:5.78:0,6,31	0/1:11,0:11:3.06:50,0,3	1/1:8,2:9:2.93:25,3,0	0/0:6,0:6:3.07:0,3,46	0/0:23,0:23:66.22:0,66,1006	0/0:44,0:44:99:0,118,1729	0/0:4,0:4:0.27:0,0,5	0/1:10,1:10:39.50:40,0,48	0/0:1,0:1:0:0,0,0	0/0:6,0:6:9.54:0,10,39
chr10	36055259	.	T	TCA	123.90	PASS	AB=0.892;AC=4;AF=0.071;AN=56;BaseQRankSum=5.310;DP=694;FS=1.116;HRun=0;HaplotypeScore=212.3562;InbreedingCoeff=-0.0794;MQ=55.17;MQ0=8;MQRankSum=-4.605;QD=1.67;ReadPosRankSum=-2.888;VQSLOD=2.0280;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,138,2055	0/0:14,0:14:33.11:0,33,502	0/0:28,0:13:34.93:0,35,505	0/0:67,0:27:33.81:0,34,410	0/0:22,0:22:63.19:0,63,923	0/0:5,0:5:6.02:0,6,92	0/0:21,0:21:8.21:0,8,551	0/0:34,0:34:90.76:0,91,1350	0/0:33,0:33:84.27:0,84,1283	0/0:30,0:30:83.77:0,84,1245	0/0:14,0:14:18.65:0,19,317	0/0:41,0:41:99:0,113,1673	0/0:23,0:23:48.14:0,48,723	0/0:17,0:16:30.05:0,30,455	0/0:18,0:18:24.49:0,24,356	0/0:31,0:31:90.27:0,90,1331	0/0:37,0:37:45.20:0,45,1179	0/1:8,4:12:99:172,0,159	0/1:16,1:13:15.07:15,0,507	0/1:17,0:17:5.57:6,0,339	0/1:24,4:28:34.20:34,0,315	0/0:17,0:17:29.97:0,30,461	0/0:17,0:17:48.16:0,48,733	0/0:47,0:47:99:0,111,1695	0/0:14,0:14:30.10:0,30,448	0/0:21,0:20:57.05:0,57,848	0/0:12,0:12:30.10:0,30,458	0/0:7,0:6:18.06:0,18,275
chr10	36055283	.	ACTCTCTCACTCT	A	6300.60	PASS	AB=0.995;AC=34;AF=0.607;AN=56;BaseQRankSum=7.617;DP=737;FS=10.817;HRun=0;HaplotypeScore=343.9034;InbreedingCoeff=0.4255;MQ=46.39;MQ0=9;MQRankSum=-7.017;QD=12.99;ReadPosRankSum=0.112;VQSLOD=2.0926;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:46:92.47:0,92,1475	0/1:17,0:17:12.77:229,0,13	0/0:9,0:5:3.01:0,3,36	0/0:33,0:12:0.47:0,0,1	0/0:18,0:18:19.05:0,19,403	1/1:15,0:13:2.58:105,3,0	1/1:28,0:25:3.54:398,4,0	1/1:13,20:32:28.44:422,28,0	0/0:31,0:30:51.01:0,51,618	1/1:40,0:38:12.75:1070,13,0	1/1:25,0:24:8.78:164,9,0	0/0:39,0:39:77.53:0,78,1261	1/1:28,0:28:4.73:476,5,0	1/1:23,0:22:24.56:370,25,0	1/1:20,0:19:23.39:358,23,0	0/1:29,0:29:40.07:40,0,552	0/1:29,0:31:57.65:58,0,357	0/1:14,0:14:6.80:152,0,7	0/1:20,0:12:9.10:183,0,9	1/1:23,0:24:13.17:135,13,0	1/1:31,0:31:21.40:354,21,0	1/1:23,0:23:27.36:296,27,0	0/0:21,0:20:39.13:0,39,695	0/0:52,0:53:85.39:0,85,1348	1/1:26,0:26:23.75:350,24,0	0/1:31,0:31:47.66:607,0,48	1/1:17,0:16:12.60:422,13,0	1/1:10,0:10:10.32:112,10,0
chr10	36055291	.	ACTCT	A	3098.73	PASS	AB=0.959;AC=28;AF=0.519;AN=54;BaseQRankSum=9.160;DP=722;FS=17.393;HRun=0;HaplotypeScore=273.7841;InbreedingCoeff=0.1546;MQ=46.29;MQ0=12;MQRankSum=-6.101;QD=6.30;ReadPosRankSum=0.249;VQSLOD=1.2098;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:44:94.20:0,94,1784	0/1:15,1:16:9.52:94,0,10	0/0:4,0:3:3.01:0,3,39	./.	0/0:19,0:19:45.08:0,45,797	0/1:11,4:13:9.08:65,0,9	1/1:34,0:29:14.51:215,15,0	0/1:29,0:28:36.79:213,0,37	0/1:32,0:31:3.52:4,0,936	0/1:37,2:37:64.04:503,0,64	1/1:22,1:22:10.15:84,10,0	0/0:39,0:39:77.85:0,78,1721	1/1:20,6:26:43.34:473,43,0	1/1:19,4:22:23.18:185,23,0	1/1:20,1:20:13.03:150,13,0	0/0:27,0:27:26.24:0,26,1152	0/1:29,0:30:33.72:34,0,827	0/1:12,0:12:4.68:5,0,77	0/1:15,0:7:8.24:69,0,8	1/1:24,1:25:9.25:57,9,0	0/1:32,0:30:2.11:156,0,2	0/1:21,1:22:3.07:147,0,3	0/0:25,0:24:42.10:0,42,926	0/0:51,0:51:90.12:0,90,1811	1/1:28,2:30:25.32:168,25,0	0/1:33,4:35:99:422,0,121	1/1:17,3:18:1.75:212,2,0	0/1:11,0:11:18.69:19,0,41
chr10	36055303	.	ACTCT	A	2761.04	PASS	AB=0.967;AC=24;AF=0.444;AN=54;BaseQRankSum=8.932;DP=706;FS=27.412;HRun=0;HaplotypeScore=275.6201;InbreedingCoeff=0.0653;MQ=44.37;MQ0=16;MQRankSum=-5.170;QD=6.29;ReadPosRankSum=-1.029;VQSLOD=1.1885;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:43:76.41:0,76,672	1/1:11,0:11:4.98:120,5,0	0/0:2,0:1:2.99:0,3,23	./.	0/0:15,0:15:33.03:0,33,443	0/1:13,3:15:8.74:67,0,9	0/1:34,0:29:35.93:140,0,36	0/1:30,0:26:90.41:105,0,90	0/0:25,0:24:41.18:0,41,387	0/1:41,2:41:99:480,0,148	1/1:27,0:26:9.76:80,10,0	0/0:39,0:39:55.50:0,56,673	1/1:27,0:27:46.56:502,47,0	1/1:19,2:21:22.54:163,23,0	1/1:26,1:25:6.79:144,7,0	0/0:25,0:25:51.06:0,51,660	0/0:30,0:30:51.03:0,51,881	0/1:12,0:12:29.33:40,0,29	0/1:11,0:6:20.69:80,0,21	0/1:26,0:24:27.20:46,0,27	0/1:31,0:29:12.99:117,0,13	0/1:23,0:23:31.29:123,0,31	0/0:26,0:25:24.84:0,25,311	0/0:52,0:53:49.76:0,50,576	1/1:30,1:31:22.36:177,22,0	0/1:40,2:38:99:362,0,196	0/1:15,3:16:12.47:187,0,12	0/1:9,0:8:6.67:7,0,54
chr10	36055307	.	T	TCTCA	1931.90	PASS	AB=0.989;AC=24;AF=0.462;AN=52;BaseQRankSum=0.630;DP=702;FS=11.828;HRun=0;HaplotypeScore=292.5833;InbreedingCoeff=0.1329;MQ=44.37;MQ0=17;MQRankSum=-2.768;QD=3.87;ReadPosRankSum=0.243;VQSLOD=0.9671;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:44,0:45:69.39:185,0,69	1/1:10,0:10:6.02:87,6,0	./.	./.	0/0:15,0:15:15.04:0,15,205	0/1:17,0:16:15.08:31,0,15	1/1:31,0:27:1.05:7,1,0	0/0:35,0:28:1.77:0,2,26	0/0:25,0:24:11.94:0,12,139	0/1:39,0:38:26.42:189,0,26	0/1:26,0:26:0.43:0,0,1	1/1:19,21:42:21.07:463,21,0	0/1:26,0:26:4.40:88,0,4	0/1:22,0:22:0.10:0,0,0	0/0:27,0:25:1.74:0,2,16	0/0:24,0:24:23.89:0,24,324	0/0:31,0:31:51.08:0,51,638	0/0:12,0:12:3:0,3,29	1/1:10,0:6:2.96:19,3,0	0/1:25,0:23:16.15:23,0,16	0/1:32,0:30:4.07:4,0,22	0/0:23,0:23:0.23:0,0,2	1/1:28,0:27:6.02:138,6,0	1/1:21,28:50:7.95:481,8,0	1/1:31,0:32:9.66:56,10,0	0/1:40,0:36:99:230,0,100	0/1:17,0:15:22.84:79,0,23	0/0:7,0:6:5.92:0,6,38
chr10	36055311	.	A	ACTCA	1931.49	PASS	AB=1.000;AC=24;AF=0.462;AN=52;BaseQRankSum=0.602;DP=711;FS=13.386;HRun=0;HaplotypeScore=300.6167;InbreedingCoeff=0.1377;MQ=44.29;MQ0=19;MQRankSum=-2.999;QD=3.87;ReadPosRankSum=0.790;VQSLOD=0.7438;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:46,0:44:75.76:183,0,76	1/1:12,0:12:6.49:88,6,0	./.	./.	0/0:15,0:14:15.04:0,15,205	0/1:17,0:16:15.08:31,0,15	1/1:35,0:30:1.05:7,1,0	0/0:42,0:34:1.77:0,2,26	0/0:25,0:25:11.94:0,12,139	0/1:40,0:37:26.42:189,0,26	0/1:26,0:25:0.43:0,0,1	1/1:38,0:38:21.07:463,21,0	0/1:29,0:29:4.40:88,0,4	0/1:22,0:22:0.10:0,0,0	0/0:28,0:26:1.74:0,2,16	0/0:24,0:24:23.89:0,24,324	0/0:32,0:32:51.08:0,51,638	0/0:12,0:12:3:0,3,29	1/1:15,0:9:3.90:21,4,0	0/1:24,0:22:16.15:23,0,16	0/1:31,0:29:4.15:4,0,22	0/0:23,0:23:0.23:0,0,2	1/1:14,12:27:6.02:138,6,0	1/1:48,0:48:7.95:481,8,0	1/1:32,0:32:9.66:56,10,0	0/1:40,0:35:99:230,0,100	0/1:17,0:15:22.84:79,0,23	0/0:7,0:6:5.92:0,6,38
chr10	36056239	.	G	GT	14284.19	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-9.719;DP=730;FS=0.289;HRun=6;HaplotypeScore=90.7928;InbreedingCoeff=0.9999;MQ=78.82;MQ0=0;MQRankSum=-5.566;QD=32.10;ReadPosRankSum=1.378;VQSLOD=4.6664;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,129,1271	1/1:1,11:12:36.11:449,36,0	0/0:25,0:25:54.15:0,54,562	0/0:23,0:23:39.14:0,39,381	0/0:41,0:41:99:0,114,1160	1/1:3,25:28:69.22:868,69,0	1/1:2,23:25:66.21:830,66,0	1/1:7,28:35:84.25:1038,84,0	0/0:25,0:25:72.14:0,72,726	1/1:3,18:21:57.14:699,57,0	1/1:3,19:22:60.15:737,60,0	0/0:24,0:24:72.13:0,72,720	1/1:4,19:23:54.17:679,54,0	1/1:2,32:35:90.20:1092,90,0	1/1:1,19:20:51.16:642,51,0	0/0:32,0:32:90.21:0,90,918	0/0:26,0:26:66.15:0,66,673	1/1:2,12:14:30.10:377,30,0	1/1:1,33:34:99:1275,102,0	1/1:5,22:27:72.20:879,72,0	1/1:3,35:38:96.31:1208,96,0	1/1:3,21:24:57.18:717,57,0	0/0:21,0:21:60.14:0,60,611	0/0:22,0:22:54.09:0,54,543	1/1:3,16:19:48.15:604,48,0	1/1:1,16:17:48.14:590,48,0	1/1:4,34:38:90.29:1126,90,0	1/1:2,11:13:39.09:474,39,0
chr10	36056327	.	GTTT	G	11024.82	PASS	AB=0.938;AC=39;AF=0.696;AN=56;BaseQRankSum=3.483;DP=722;FS=1.817;HRun=17;HaplotypeScore=230.4425;InbreedingCoeff=0.9347;MQ=53.07;MQ0=5;MQRankSum=-9.132;QD=20.57;ReadPosRankSum=0.621;VQSLOD=1.2707;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:38:46.39:291,46,0	1/1:6,6:12:22.48:224,22,0	0/0:14,0:5:6.02:0,6,69	0/1:14,0:10:0:0,0,26	0/0:5,0:24:20.83:0,21,63	1/1:6,18:24:66.01:663,66,0	1/1:10,14:24:55.88:552,56,0	1/1:13,15:28:55.36:494,55,0	0/0:4,0:24:15.90:0,16,51	1/1:3,28:31:77.92:774,78,0	1/1:16,21:37:69.32:719,69,0	0/0:22,0:21:44.09:0,44,576	1/1:13,16:29:74.23:696,74,0	1/1:7,17:24:56.96:577,57,0	1/1:16,19:35:76.61:766,77,0	0/0:3,0:19:24.60:0,25,83	0/0:3,0:29:15.28:0,15,61	1/1:9,10:18:38.55:382,39,0	1/1:21,9:29:57.54:542,58,0	1/1:10,38:48:99:1038,100,0	1/1:7,7:14:20.62:200,21,0	1/1:10,19:29:61.98:639,62,0	0/0:29,0:29:68.53:0,69,763	0/0:23,0:23:51.08:0,51,672	1/1:6,16:22:56.02:566,56,0	1/1:6,18:24:59.54:606,60,0	1/1:13,24:37:95.52:932,96,0	1/1:3,11:14:35.82:362,36,0
chr10	36056329	.	T	TG	6254	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=10.954;DP=718;FS=2.635;HRun=0;HaplotypeScore=224.0144;InbreedingCoeff=0.9944;MQ=52.72;MQ0=8;MQRankSum=-9.949;QD=13.39;ReadPosRankSum=1.426;VQSLOD=5.0213;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:36:57.88:0,58,678	1/1:10,2:12:28.34:161,28,0	0/0:18,0:5:11.93:0,12,105	0/0:17,0:11:20.83:0,21,156	0/0:24,0:24:62.74:0,63,570	1/1:20,4:24:58.31:290,58,0	1/1:19,5:23:57.41:334,57,0	1/1:22,4:26:72.22:525,72,0	0/0:25,0:25:68.16:0,68,591	1/1:29,1:30:73.77:399,74,0	1/1:33,5:38:87.15:478,87,0	0/0:22,0:21:57.69:0,58,532	1/1:20,8:28:67.22:369,67,0	1/1:20,3:23:45.91:204,46,0	1/1:29,4:33:80.29:460,80,0	0/0:22,0:22:58.92:0,59,484	0/0:30,0:29:81.07:0,81,750	1/1:15,4:18:44.16:258,44,0	1/1:20,7:26:74.36:528,74,0	1/1:46,1:47:99:512,106,0	1/1:9,5:14:28.30:193,28,0	1/1:26,1:27:57.44:281,57,0	0/0:30,0:30:69.54:0,70,684	0/0:25,0:24:56.89:0,57,591	1/1:20,2:22:56.71:278,57,0	1/1:23,1:24:64.39:328,64,0	1/1:28,7:35:84:477,84,0	1/1:13,1:14:37.52:179,38,0
chr10	36057464	.	G	GT	16654.66	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=11.796;DP=840;FS=0.582;HRun=1;HaplotypeScore=161.9130;InbreedingCoeff=0.9995;MQ=74.55;MQ0=3;MQRankSum=-3.862;QD=36.05;ReadPosRankSum=3.608;VQSLOD=4.4490;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:79.62:0,80,1108	1/1:0,9:9:24.55:385,25,0	0/0:63,0:44:99:0,119,1587	0/0:60,0:42:74.37:0,74,1187	0/0:22,0:22:66.22:0,66,915	1/1:1,18:19:35.90:575,36,0	1/1:1,22:22:48.14:767,48,0	1/1:4,37:39:99:1778,117,0	0/0:31,0:31:87.29:0,87,1209	1/1:4,26:30:79.50:1206,80,0	1/1:2,14:16:34.36:531,34,0	0/0:37,0:37:96.32:0,96,1324	1/1:2,20:21:57.18:887,57,0	1/1:2,30:32:68.55:1099,69,0	1/1:0,32:32:75.71:1288,76,0	0/0:28,0:28:84.28:0,84,1172	0/0:32,0:33:83.12:0,83,1131	1/1:0,14:14:27.09:431,27,0	1/1:2,18:20:54.17:808,54,0	1/1:4,26:30:62.01:964,62,0	1/1:1,57:56:99:1725,107,0	1/1:2,26:26:63.07:1007,63,0	0/0:12,0:12:36.12:0,36,498	0/0:48,0:47:99:0,132,1830	1/1:3,19:21:38.02:622,38,0	1/1:2,29:31:84.24:1286,84,0	1/1:2,19:21:47.32:741,47,0	1/1:2,10:12:36.12:555,36,0
chr10	36057482	.	TCG	T	5080.88	PASS	AB=0.860;AC=25;AF=0.446;AN=56;BaseQRankSum=9.801;DP=796;FS=19.610;HRun=0;HaplotypeScore=187.5193;InbreedingCoeff=-0.0527;MQ=58.78;MQ0=16;MQRankSum=-1.470;QD=10.00;ReadPosRankSum=-0.075;VQSLOD=3.0546;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:44:70.84:0,71,741	0/1:7,1:9:20.75:90,0,21	0/0:48,0:23:46.72:0,47,410	0/0:43,0:20:8.96:0,9,186	0/0:23,0:23:17.13:0,17,322	0/1:11,5:18:0.68:170,0,1	1/1:14,6:20:24.74:342,25,0	1/1:28,6:33:87.19:724,87,0	0/1:32,0:32:2.92:3,0,294	0/1:16,5:25:36.67:326,0,37	0/1:17,0:18:99:151,0,102	0/0:34,0:34:63.83:0,64,740	1/1:16,2:20:1.91:270,2,0	0/1:14,7:25:58.95:280,0,59	1/1:20,6:29:40.79:452,41,0	0/0:29,0:29:55.49:0,55,1039	0/1:40,0:40:10.06:10,0,364	1/1:7,1:11:11.29:154,11,0	0/1:16,2:20:23.85:219,0,24	0/1:19,5:27:19.45:252,0,19	0/1:44,12:55:8.37:513,0,8	0/1:18,9:26:22.49:298,0,22	0/0:13,0:13:26.86:0,27,204	0/0:52,0:50:99:0,111,1329	0/1:18,3:23:78.55:145,0,79	0/1:24,8:35:85.51:406,0,86	0/1:12,2:18:35.89:172,0,36	0/1:5,3:11:41.06:103,0,41
chr10	36057483	.	C	CGT	3595.28	PASS	AB=0.960;AC=30;AF=0.577;AN=52;BaseQRankSum=2.067;DP=816;FS=0.000;HRun=0;HaplotypeScore=204.4259;InbreedingCoeff=-0.1127;MQ=57.40;MQ0=16;MQRankSum=-1.975;QD=5.91;ReadPosRankSum=-4.208;VQSLOD=2.4056;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:26,2:50:24.02:243,24,0	0/1:9,0:9:35.17:35,0,38	./.	./.	0/0:18,0:22:8.52:0,9,42	1/1:18,0:18:15.03:182,15,0	1/1:21,0:20:9.02:104,9,0	1/1:36,0:34:3.91:22,4,0	0/0:17,0:32:25.53:0,26,144	1/1:29,0:28:24.49:259,24,0	0/1:19,0:19:8.31:172,0,8	0/1:24,8:32:86.49:152,0,86	0/1:20,0:19:12.28:142,0,12	0/1:24,0:26:25.26:230,0,25	1/1:33,0:33:22.87:201,23,0	0/0:25,0:28:50.63:0,51,494	0/0:23,0:40:39.03:0,39,208	1/1:12,0:12:9.02:110,9,0	0/1:22,0:22:27.41:77,0,27	0/1:29,0:29:28.23:159,0,28	0/1:62,0:58:48.38:189,0,48	0/1:31,0:28:3.78:154,0,4	1/1:14,0:14:3.01:42,3,0	0/1:31,22:51:99:437,0,142	0/1:26,0:25:28.28:159,0,28	0/1:35,0:35:32.05:193,0,32	0/1:19,0:19:3.15:212,0,3	0/1:11,0:11:9.51:121,0,10
chr10	36058347	.	T	TTCTCTCTCTCTC	237.03	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-3.482;DP=781;FS=0.998;HRun=0;HaplotypeScore=301.9630;InbreedingCoeff=0.7037;MQ=58.32;MQ0=8;MQRankSum=0.616;QD=2.76;ReadPosRankSum=-3.990;VQSLOD=0.8997;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:30:27.43:0,27,809	0/0:15,0:15:34.67:0,35,817	0/0:35,0:23:21.05:0,21,405	0/0:37,0:29:27.09:0,27,874	1/1:16,0:17:0.47:1,0,0	0/0:20,0:20:26.96:0,27,651	0/0:34,0:34:10.25:0,10,1424	0/0:49,0:48:8.61:0,9,951	1/1:26,12:36:6.02:193,6,0	0/0:36,0:35:68.58:0,69,1525	0/0:19,0:19:22.90:0,23,633	0/0:19,0:19:24.07:0,24,756	0/0:23,0:23:39.13:0,39,958	0/0:30,0:30:25.14:0,25,1572	0/0:28,0:28:62.93:0,63,1638	1/1:12,7:18:0.47:1,0,0	1/1:8,4:12:3.01:141,3,0	0/0:22,0:22:25.66:0,26,1156	0/0:18,0:16:20.50:0,21,494	0/0:36,0:36:37.71:0,38,1464	0/0:46,0:46:68.68:0,69,1710	0/0:33,0:34:65.82:0,66,1583	0/0:22,0:22:39.12:0,39,1259	0/0:42,0:42:37.36:0,37,2554	0/0:21,0:21:7.67:0,8,779	0/0:32,0:32:29.70:0,30,1073	0/0:25,0:25:33.35:0,33,1324	0/0:20,0:20:39.13:0,39,949
chr10	36058366	.	T	TCACA	656.63	PASS	AB=0.691;AC=10;AF=0.192;AN=52;BaseQRankSum=2.173;DP=768;FS=10.235;HRun=0;HaplotypeScore=209.5139;InbreedingCoeff=0.7231;MQ=52.98;MQ0=14;MQRankSum=-3.370;QD=4.59;ReadPosRankSum=-1.815;VQSLOD=1.0725;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:18,17:37:29.15:42,0,29	0/0:17,0:18:30.08:0,30,378	./.	./.	1/1:7,0:15:0.47:1,0,0	0/0:22,0:23:34.05:0,34,446	0/0:29,0:32:24.04:0,24,278	0/0:44,0:42:24.87:0,25,249	1/1:28,0:29:28.33:373,28,0	0/0:35,0:33:32.89:0,33,354	0/0:16,0:16:21.32:0,21,266	0/1:15,0:23:0:0,0,0	0/0:21,0:22:33.09:0,33,409	0/0:35,0:36:48.35:0,48,624	0/0:28,0:30:60.18:0,60,812	1/1:17,0:17:14.78:188,15,0	1/1:12,0:13:15.48:194,15,0	0/0:23,0:24:33.10:0,33,446	0/0:16,0:15:9.03:0,9,131	0/0:27,0:28:24.01:0,24,309	0/0:52,0:53:33.43:0,33,771	0/0:35,0:36:47.80:0,48,587	0/0:24,0:24:23.93:0,24,320	0/0:47,0:47:52.01:0,52,789	0/0:19,0:19:21.05:0,21,277	0/0:32,0:32:4.54:0,5,401	0/0:29,0:30:38.18:0,38,512	0/0:18,0:17:24.06:0,24,344
chr10	36059199	.	G	GAAAC	12141.06	PASS	AB=0.978;AC=27;AF=0.482;AN=56;BaseQRankSum=-7.689;DP=792;FS=56.899;HRun=0;HaplotypeScore=165.5983;InbreedingCoeff=-0.4089;MQ=50.05;MQ0=25;MQRankSum=0.799;QD=21.23;ReadPosRankSum=0.155;VQSLOD=2.3172;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:42,0:41:67.89:903,0,68	1/1:15,0:15:2.16:412,2,0	0/0:61,0:17:30.93:0,31,283	0/0:91,0:24:55.57:0,56,773	1/1:29,1:29:8.66:800,9,0	0/1:25,0:24:99:421,0,132	0/1:26,0:25:99:393,0,126	0/1:40,0:40:99:753,0,413	0/1:4,8:13:42.89:72,0,43	0/1:25,0:24:74.88:748,0,75	0/1:15,0:15:8.64:504,0,9	0/0:18,0:18:48.15:0,48,814	0/1:27,0:26:97.26:491,0,97	1/1:31,0:28:13.04:778,13,0	0/1:22,0:22:99:611,0,112	0/1:30,0:30:99:873,0,102	0/1:20,0:16:85.62:220,0,86	0/1:19,0:18:99:452,0,157	0/1:38,0:32:99:649,0,218	1/1:16,0:16:2.04:346,2,0	0/1:36,0:35:99:535,0,137	0/1:19,0:16:7.40:387,0,7	0/0:16,0:16:42.14:0,42,709	0/0:34,0:34:83.24:0,83,1477	0/1:18,0:15:82.24:418,0,82	0/1:25,0:24:99:708,0,128	0/1:25,0:25:99:304,0,310	0/1:15,0:15:37.66:365,0,38
chr10	36060704	.	A	ACAAACCACATCGAAC	56233.99	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-4.193;DP=609;FS=3.760;HRun=0;HaplotypeScore=183.2074;InbreedingCoeff=0.9675;MQ=72.09;MQ0=0;MQRankSum=-14.361;QD=115.00;ReadPosRankSum=2.276;VQSLOD=5.0084;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:16,11:41:60.21:3903,60,0	1/1:4,1:7:8.69:522,9,0	0/0:24,0:24:57.19:0,57,2089	0/0:24,0:24:62.95:0,63,2033	1/1:12,0:12:30.10:1978,30,0	1/1:5,6:17:21.07:1373,21,0	1/1:11,8:33:48.16:3176,48,0	1/1:36,0:36:93.25:4528,93,0	1/1:26,0:26:69.24:4581,69,0	1/1:4,8:19:48.16:2996,48,0	1/1:6,11:20:45.15:3022,45,0	0/0:22,0:22:60.19:0,60,2349	1/1:6,8:21:39.13:2529,39,0	1/1:3,9:23:39.13:2809,39,0	1/1:1,12:24:36.12:2637,36,0	1/1:19,0:19:54.19:3472,54,0	1/1:16,0:16:42.14:2738,42,0	1/1:6,6:19:27.09:1975,27,0	1/1:10,1:22:48.01:1783,48,0	1/1:6,3:24:23.95:1347,24,0	1/1:7,4:28:18.06:1260,18,0	1/1:4,1:7:12.04:870,12,0	0/0:15,0:15:42.14:0,42,1821	0/0:35,0:35:90.27:0,90,3629	1/1:2,6:19:24.08:1551,24,0	1/1:19,7:27:78.26:4386,78,0	1/1:4,5:20:30.10:2180,30,0	1/1:8,0:8:12.02:618,12,0
chr10	36060711	.	A	ACATCGAACCAAACCG	38958.58	PASS	AB=1.000;AC=35;AF=0.625;AN=56;BaseQRankSum=-7.452;DP=515;FS=10.833;HRun=0;HaplotypeScore=151.4124;InbreedingCoeff=0.1745;MQ=76.41;MQ0=0;MQRankSum=-14.995;QD=100.15;ReadPosRankSum=7.111;VQSLOD=3.6020;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:31,0:31:3.18:2817,3,0	1/1:3,0:3:2.67:201,3,0	0/0:26,0:26:75.24:0,75,2450	0/0:26,0:26:66.57:0,67,2234	1/1:0,7:13:29.64:1610,30,0	0/1:15,0:14:26.93:989,0,27	0/1:23,0:23:27.88:1587,0,28	0/1:27,0:31:11.65:2934,0,12	1/1:0,15:26:51.03:3859,51,0	0/1:18,0:18:0.86:2260,0,1	0/1:16,0:16:11.86:2177,0,12	0/0:23,0:23:66.20:0,66,2592	1/1:15,0:15:27.09:1829,27,0	0/1:21,0:21:13.88:1979,0,14	1/1:23,0:23:15.13:2405,15,0	1/1:0,10:15:30.10:2278,30,0	1/1:0,8:19:24.08:1823,24,0	1/1:13,0:13:21.07:1400,21,0	1/1:11,0:11:27.52:1209,28,0	0/1:15,0:15:7.06:591,0,7	0/1:16,0:16:6.94:954,0,7	0/1:3,0:3:10.98:197,0,11	0/0:14,0:14:42.14:0,42,1954	0/0:37,0:37:99:0,102,3956	1/1:15,0:15:18.06:1211,18,0	1/1:21,0:22:7.61:2865,8,0	0/1:16,0:16:19.91:1371,0,20	0/1:9,0:9:11.98:413,0,12
chr10	36060809	.	TCCTTCC	T	15440.24	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=15.434;DP=548;FS=8.611;HRun=0;HaplotypeScore=131.7937;InbreedingCoeff=0.9966;MQ=84.08;MQ0=0;MQRankSum=-16.288;QD=55.14;ReadPosRankSum=-0.048;VQSLOD=4.7258;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,157,5488	1/1:0,7:7:18.06:425,18,0	0/0:22,0:22:57.06:0,57,1821	0/0:23,0:23:59.46:0,59,1757	0/0:23,0:23:66.23:0,66,2393	1/1:0,14:14:36.12:885,36,0	1/1:1,13:13:27.09:664,27,0	1/1:1,13:14:39.13:896,39,0	0/0:22,0:22:66.23:0,66,2277	1/1:2,21:23:60.21:1459,60,0	1/1:1,15:16:29.94:737,30,0	0/0:13,0:13:39.12:0,39,1278	1/1:0,11:11:27.09:664,27,0	1/1:1,12:13:27.09:664,27,0	1/1:1,14:15:32.78:812,33,0	0/0:23,0:22:69.20:0,69,2371	0/0:35,0:35:99:0,105,3773	1/1:2,6:8:21.03:463,21,0	1/1:5,15:20:45.15:1049,45,0	1/1:0,17:17:30.10:738,30,0	1/1:4,20:24:26.88:625,27,0	1/1:0,14:14:36.12:886,36,0	0/0:22,0:22:66.19:0,66,2308	0/0:29,0:29:84.29:0,84,2802	1/1:2,24:26:69.24:1697,69,0	1/1:0,23:23:66.23:1594,66,0	1/1:2,7:9:21.07:517,21,0	1/1:0,12:12:27.09:665,27,0
chr10	36061650	.	T	TG	1487.63	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-4.592;DP=675;FS=6.641;HRun=0;HaplotypeScore=68.1384;InbreedingCoeff=0.9804;MQ=92.90;MQ0=0;MQRankSum=-5.141;QD=38.14;ReadPosRankSum=0.343;VQSLOD=3.6526;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:1,38:39:99:1583,99,0	0/0:7,0:7:21.07:0,21,294	0/0:38,0:38:88.79:0,89,1389	0/0:31,0:31:90.29:0,90,1224	0/0:24,0:24:72.23:0,72,989	0/0:28,0:28:81.23:0,81,1096	0/0:31,0:31:93.31:0,93,1301	0/0:26,0:26:78.24:0,78,1048	0/0:23,0:23:66.22:0,66,922	0/0:28,0:28:81.27:0,81,1133	0/0:14,0:14:39.13:0,39,545	0/0:15,0:15:42.13:0,42,570	0/0:21,0:21:63.21:0,63,881	0/0:30,0:30:90.30:0,90,1258	0/0:29,0:29:84.28:0,84,1175	0/0:27,0:27:75.24:0,75,1032	0/0:24,0:24:72.24:0,72,1007	0/0:22,0:22:60.20:0,60,839	0/0:22,0:22:66.22:0,66,922	0/0:32,0:32:93.30:0,93,1284	0/0:31,0:31:90.30:0,90,1258	0/0:22,0:22:66.22:0,66,923	0/0:19,0:19:57.18:0,57,780	0/0:20,0:20:60.20:0,60,839	0/0:14,0:14:42.13:0,42,571	0/0:23,0:22:66.22:0,66,918	0/0:29,0:29:84.25:0,84,1139	0/0:6,0:6:15.03:0,15,192
chr10	36061953	.	A	ATC	15468.46	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=19.919;DP=585;FS=5.049;HRun=0;HaplotypeScore=138.5741;InbreedingCoeff=0.9902;MQ=93.46;MQ0=0;MQRankSum=-10.849;QD=50.39;ReadPosRankSum=3.100;VQSLOD=5.2363;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,117,1873	1/1:0,10:10:30.10:544,30,0	0/0:29,0:29:87.26:0,87,1378	0/0:28,0:28:81.17:0,81,1183	0/0:23,0:23:69.24:0,69,1126	1/1:0,17:18:48.16:875,48,0	1/1:0,18:18:54.19:982,54,0	1/1:1,7:8:23.11:387,23,0	0/0:25,0:25:75.26:0,75,1224	1/1:1,27:28:84.29:1495,84,0	1/1:0,14:14:33.11:559,33,0	0/0:32,0:32:96.33:0,96,1561	1/1:0,23:23:66.23:1204,66,0	1/1:1,20:21:60.12:1054,60,0	1/1:0,17:17:51.17:917,51,0	0/0:21,0:21:63.22:0,63,1028	0/0:33,0:33:99:0,99,1585	1/1:0,22:23:63.22:1134,63,0	1/1:1,18:19:54.19:973,54,0	1/1:0,18:18:48.16:864,48,0	1/1:2,25:27:73.49:1291,73,0	1/1:0,15:16:45.15:792,45,0	0/0:23,0:23:69.24:0,69,1126	0/0:24,1:25:20.59:0,21,1094	1/1:0,15:15:42.14:763,42,0	1/1:0,16:16:48.16:871,48,0	1/1:0,12:12:33.11:603,33,0	1/1:0,4:4:9.03:161,9,0
chr10	36062581	.	T	TAA	3689.01	PASS	AB=0.583;AC=35;AF=0.625;AN=56;BaseQRankSum=11.838;DP=379;FS=5.376;HRun=8;HaplotypeScore=88.2917;InbreedingCoeff=0.8650;MQ=59.44;MQ0=6;MQRankSum=-6.246;QD=22.36;ReadPosRankSum=-7.576;VQSLOD=0.8764;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:21:32.65:0,33,396	1/1:2,2:5:12.01:155,12,0	0/0:22,0:10:16.33:0,16,235	0/0:22,0:19:35.27:0,35,480	0/0:23,0:24:48.04:0,48,581	1/1:1,8:10:14.95:181,15,0	1/1:7,5:12:13.76:177,14,0	1/1:2,7:10:23.90:310,24,0	0/0:17,0:16:17.95:0,18,369	1/1:1,6:8:18.06:282,18,0	1/1:5,1:8:16.28:157,16,0	0/0:12,0:12:17.87:0,18,200	1/1:6,0:6:7.15:82,7,0	1/1:0,2:2:6.02:95,6,0	1/1:3,7:11:22.23:263,22,0	0/0:14,0:13:21.82:0,22,279	0/0:31,0:31:56.43:0,56,656	1/1:5,3:8:21.07:293,21,0	1/1:3,1:3:5.89:60,6,0	1/1:3,7:10:26.97:316,27,0	1/1:7,9:17:31.30:347,31,0	1/1:4,4:8:12.04:162,12,0	0/0:24,0:23:46.32:0,46,532	0/0:23,0:23:50.94:0,51,568	1/1:7,4:12:24.82:222,25,0	0/1:4,7:13:3.41:340,0,3	1/1:5,4:10:15.77:152,16,0	1/1:0,4:4:6.02:95,6,0
chr10	36062671	.	ACAGAGG	A	898.21	PASS	AB=1.000;AC=23;AF=0.523;AN=44;BaseQRankSum=4.808;DP=527;FS=2.160;HRun=0;HaplotypeScore=115.8149;InbreedingCoeff=0.5182;MQ=54.22;MQ0=53;MQRankSum=-5.293;QD=4.06;ReadPosRankSum=0.640;VQSLOD=2.0347;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:23:33.10:0,33,909	./.	./.	0/1:22,0:17:0:0,0,0	0/0:24,0:23:6.02:0,6,108	1/1:9,3:9:3.01:53,3,0	1/1:25,0:23:11.84:185,12,0	0/0:19,0:14:3.01:0,3,33	0/0:13,0:11:18.06:0,18,503	1/1:23,0:16:5.99:52,6,0	./.	0/0:20,0:19:21.06:0,21,533	1/1:9,2:9:3.01:61,3,0	1/1:11,0:10:6.02:114,6,0	0/1:8,0:6:30.40:49,0,30	0/0:16,0:14:18.05:0,18,392	0/0:40,0:38:58.44:0,58,1474	1/1:10,1:11:9.03:184,9,0	./.	1/1:16,2:17:3.01:50,3,0	0/1:40,0:36:46.48:46,0,56	1/1:11,1:9:3.01:53,3,0	0/0:28,0:22:15.03:0,15,260	0/0:39,0:36:55.07:0,55,1408	./.	1/1:14,2:12:9:143,9,0	1/1:7,1:6:3.01:61,3,0	./.
chr10	36062702	.	C	CAG	377.90	PASS	AB=0.924;AC=11;AF=0.220;AN=50;BaseQRankSum=4.121;DP=500;FS=0.000;HRun=0;HaplotypeScore=60.4731;InbreedingCoeff=-0.0023;MQ=36.32;MQ0=129;MQRankSum=-2.449;QD=2.55;ReadPosRankSum=-1.994;VQSLOD=1.3182;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:19:42.47:0,42,480	0/0:11,0:8:8.24:0,8,85	./.	0/0:23,0:4:5.42:0,5,118	0/0:15,0:13:9.03:0,9,125	0/1:12,0:5:30.10:47,0,30	0/1:26,2:21:74.49:74,0,265	0/0:20,0:12:1.96:0,2,142	0/0:15,0:10:24.08:0,24,336	0/0:24,0:12:15.32:0,15,172	./.	0/0:12,0:10:30.10:0,30,420	0/0:7,0:4:2.88:0,3,15	1/1:2,1:2:6.02:98,6,0	0/1:4,2:3:19.78:31,0,20	0/0:14,0:12:30.07:0,30,385	0/0:40,0:36:83.76:0,84,1107	0/1:6,2:6:6.91:86,0,7	0/0:39,0:4:5.93:0,6,50	0/1:12,0:10:20.50:20,0,75	0/1:52,1:35:37.87:38,0,94	1/1:12,0:8:1.73:51,2,0	0/0:10,0:7:15.04:0,15,193	0/0:40,0:35:72.60:0,73,978	0/0:17,0:8:3:0,3,26	0/1:14,0:9:67.97:68,0,89	0/0:5,0:1:2.90:0,3,16	./.
chr10	36062726	.	GAGAGGC	G	909.23	PASS	AB=0.900;AC=24;AF=0.571;AN=42;BaseQRankSum=5.247;DP=389;FS=13.266;HRun=0;HaplotypeScore=58.6869;InbreedingCoeff=0.4821;MQ=36.98;MQ0=74;MQRankSum=-5.122;QD=5.35;ReadPosRankSum=0.029;VQSLOD=-0.2786;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:16,0:12:10.23:10,0,23	1/1:3,1:3:3.01:63,3,0	0/0:37,0:3:2.37:0,2,8	./.	0/0:12,0:9:9.03:0,9,262	./.	1/1:19,5:16:11.93:178,12,0	1/1:6,1:4:3.01:63,3,0	0/0:12,0:8:15.05:0,15,484	1/1:16,2:9:6.02:126,6,0	./.	0/0:12,0:11:27.09:0,27,752	./.	1/1:2,1:3:3.01:63,3,0	./.	0/0:10,0:9:21.07:0,21,506	0/0:32,0:31:63.22:0,63,1789	0/1:6,2:5:53.90:54,0,92	1/1:20,1:3:6.02:126,6,0	1/1:5,1:5:3.01:63,3,0	1/1:33,6:31:2.98:63,3,0	1/1:4,5:7:3.01:63,3,0	0/0:11,0:6:13.29:0,13,286	0/0:33,0:31:57.18:0,57,1622	./.	1/1:9,2:6:6.02:126,6,0	1/1:4,0:3:3.01:63,3,0	./.
chr10	36062732	.	C	CAG	662.91	PASS	AB=0.971;AC=19;AF=0.365;AN=52;BaseQRankSum=4.898;DP=406;FS=4.832;HRun=0;HaplotypeScore=59.3334;InbreedingCoeff=-0.0883;MQ=38.84;MQ0=67;MQRankSum=-4.083;QD=3.01;ReadPosRankSum=-4.611;VQSLOD=-0.1018;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:10,0:8:20.44:68,0,20	0/1:3,1:3:39.65:42,0,40	0/0:49,0:4:2.74:0,3,13	0/1:40,0:7:1.71:2,0,37	0/0:9,0:7:9.03:0,9,126	0/0:6,0:4:2.97:0,3,20	0/1:25,1:18:58.48:58,0,167	0/1:12,0:9:99:128,0,131	0/0:12,0:8:18.06:0,18,251	0/1:18,0:10:79.51:81,0,80	./.	0/0:12,0:11:33.10:0,33,445	0/1:6,0:4:0.93:1,0,37	1/1:3,1:4:6.02:98,6,0	1/1:3,2:3:6.02:97,6,0	0/0:12,0:12:24.08:0,24,336	0/0:33,0:32:87.23:0,87,1178	0/1:8,0:5:28.92:29,0,110	0/1:14,1:2:8.50:47,0,9	0/1:6,0:5:35.93:36,0,47	0/1:41,1:36:17.12:17,0,35	1/1:8,0:7:3.01:41,3,0	0/0:11,0:7:14.61:0,15,191	0/0:30,0:29:69.20:0,69,931	0/1:10,0:6:0:0,0,0	0/0:8,0:4:11.72:0,12,95	0/1:5,0:4:32.97:67,0,33	./.
chr10	36062785	.	A	AGG	337.29	PASS	AB=0.950;AC=4;AF=0.074;AN=54;BaseQRankSum=3.107;DP=420;FS=6.797;HRun=2;HaplotypeScore=91.9135;InbreedingCoeff=0.4598;MQ=54.14;MQ0=29;MQRankSum=0.034;QD=12.05;ReadPosRankSum=-1.772;VQSLOD=-0.1156;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,12:13:21.07:387,21,0	0/0:2,0:2:6.02:0,6,86	0/0:52,0:22:43.91:0,44,522	0/0:39,0:19:18.74:0,19,407	0/0:9,0:9:24.07:0,24,333	0/0:11,0:9:24.05:0,24,310	0/0:17,0:14:30.10:0,30,429	0/0:6,0:6:15.05:0,15,214	0/0:17,0:17:42.10:0,42,592	0/0:12,0:11:27.09:0,27,386	0/1:3,0:2:0:0,0,0	0/0:14,0:14:39.13:0,39,572	0/0:13,0:10:21.03:0,21,277	0/0:17,0:14:23.77:0,24,302	0/0:7,0:5:9.03:0,9,129	0/0:10,0:10:27.09:0,27,403	0/0:24,0:23:64.77:0,65,935	0/1:8,1:8:53.68:54,0,231	0/0:21,0:6:15.05:0,15,212	0/0:4,0:3:6.02:0,6,86	0/0:41,0:34:23.16:0,23,420	0/0:2,0:2:3.01:0,3,35	0/0:9,0:7:21.06:0,21,289	0/0:43,0:43:99:0,108,1521	0/0:3,0:3:5.55:0,6,85	0/0:11,0:10:27.53:0,28,364	0/0:8,0:8:18.06:0,18,258	./.
chr10	36062804	.	CAG	C	203.13	PASS	AB=0.800;AC=8;AF=0.160;AN=50;BaseQRankSum=4.846;DP=443;FS=23.087;HRun=0;HaplotypeScore=101.5205;InbreedingCoeff=-0.1875;MQ=55.91;MQ0=12;MQRankSum=-5.438;QD=2.14;ReadPosRankSum=-3.796;VQSLOD=-0.5088;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:17:18.53:0,19,312	0/1:1,3:3:31.49:31,0,47	0/0:49,0:30:49.75:0,50,911	0/0:41,0:22:47.33:0,47,524	0/0:11,0:10:21.07:0,21,368	0/0:15,1:15:3.88:0,4,337	0/1:16,4:18:4.73:5,0,380	0/1:6,0:5:28.39:28,0,145	0/0:16,0:16:36.02:0,36,586	0/1:11,1:11:1.50:2,0,434	./.	0/0:18,0:17:48.15:0,48,808	0/1:11,6:14:91.99:92,0,239	0/0:14,2:14:17.72:0,18,315	0/1:8,6:12:99:137,0,183	0/0:14,0:13:27.09:0,27,461	0/0:27,0:26:64.76:0,65,1013	0/0:11,0:10:20.10:0,20,321	0/0:8,0:5:15.04:0,15,214	0/0:5,0:5:9.03:0,9,148	0/0:31,2:27:30.10:0,30,522	./.	0/0:6,0:5:15.05:0,15,263	0/0:49,0:49:99:0,108,1865	0/0:5,0:5:9.03:0,9,153	0/1:9,2:11:13.91:14,0,312	0/1:8,3:11:16.14:16,0,288	./.
chr10	36062824	.	C	CAG	344.26	PASS	AB=0.889;AC=4;AF=0.074;AN=54;BaseQRankSum=-0.079;DP=570;FS=3.572;HRun=0;HaplotypeScore=124.3750;InbreedingCoeff=-0.0428;MQ=44.94;MQ0=53;MQRankSum=-1.379;QD=4.10;ReadPosRankSum=-2.319;VQSLOD=2.1170;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:20:29.82:0,30,383	0/0:10,0:8:9.03:0,9,115	0/0:22,0:18:33.55:0,34,355	0/1:18,0:11:27:50,0,27	0/0:14,0:13:15.05:0,15,203	0/0:23,0:21:34:0,34,347	0/0:25,0:19:28.32:0,28,357	0/0:13,0:9:20.90:0,21,241	0/1:19,2:19:99:101,0,388	0/0:28,0:25:48.12:0,48,585	0/0:7,0:6:1.25:0,1,3	0/0:23,0:21:50.66:0,51,689	0/0:23,0:18:36.10:0,36,447	0/0:18,0:14:20.90:0,21,279	0/0:19,0:14:20.88:0,21,250	0/1:10,6:15:99:138,0,238	0/1:27,1:26:99:162,0,510	0/0:13,0:14:23.77:0,24,277	0/0:42,0:19:47.98:0,48,552	0/0:12,0:10:4.59:0,5,20	0/0:46,0:35:32.62:0,33,441	0/0:6,0:5:3.01:0,3,35	0/0:4,0:3:9.03:0,9,122	0/0:49,0:48:99:0,117,1582	0/0:11,0:9:1.28:0,1,29	0/0:29,0:26:58.05:0,58,686	0/0:18,0:16:33.10:0,33,408	./.
chr10	36062848	.	CAG	C	3233.06	PASS	AB=0.782;AC=22;AF=0.393;AN=56;BaseQRankSum=3.625;DP=601;FS=13.130;HRun=0;HaplotypeScore=92.5231;InbreedingCoeff=-0.4658;MQ=38.18;MQ0=73;MQRankSum=3.029;QD=6.86;ReadPosRankSum=2.114;VQSLOD=2.4870;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:22:37.54:0,38,660	0/1:6,3:7:10.05:113,0,10	0/0:11,0:4:6.02:0,6,83	0/0:8,0:2:2.03:0,2,5	0/1:11,4:13:41.30:114,0,41	0/1:17,6:19:63.50:63,0,158	0/1:15,7:16:63.40:63,0,154	0/1:16,2:15:48.84:49,0,409	0/1:10,10:18:99:330,0,160	0/1:22,6:24:99:114,0,411	0/1:7,3:8:4.87:71,0,5	0/0:20,0:18:45.15:0,45,804	0/1:14,9:18:99:235,0,144	0/1:10,8:14:29.67:181,0,30	0/1:19,5:19:98.81:99,0,119	0/1:13,7:17:99:265,0,186	0/1:19,15:31:99:413,0,346	0/1:7,8:13:96.62:262,0,97	0/1:56,2:21:39.28:39,0,410	0/1:8,0:7:2.71:25,0,3	0/1:31,9:28:99:174,0,180	0/0:11,0:9:11.54:0,12,97	0/0:6,0:6:15.05:0,15,256	0/0:49,1:49:99:0,108,1909	0/1:15,3:11:14.69:72,0,15	0/1:33,12:37:99:227,0,542	0/1:8,11:17:29.87:356,0,30	1/1:1,3:3:9.03:126,9,0
chr10	36064115	.	TTG	T	4084.23	PASS	AB=1.000;AC=46;AF=0.821;AN=56;BaseQRankSum=8.889;DP=568;FS=4.492;HRun=0;HaplotypeScore=157.6336;InbreedingCoeff=0.7527;MQ=59.76;MQ0=3;MQRankSum=-7.426;QD=8.78;ReadPosRankSum=1.779;VQSLOD=3.1657;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:27:45.40:205,45,0	1/1:8,0:8:14.16:70,14,0	0/1:42,0:24:3.83:4,0,149	0/0:41,0:20:11.06:0,11,231	1/1:11,13:23:30.55:349,31,0	1/1:14,0:14:26.04:127,26,0	1/1:17,0:17:29.77:149,30,0	1/1:21,0:21:17.22:83,17,0	1/1:14,10:22:45.11:519,45,0	1/1:25,0:25:51.83:246,52,0	1/1:11,0:11:22.20:110,22,0	0/0:20,0:20:6.63:0,7,390	1/1:8,0:8:13.55:68,14,0	1/1:14,0:14:22.73:112,23,0	1/1:14,0:14:23.93:114,24,0	1/1:6,11:17:42.13:503,42,0	1/1:10,10:19:39.11:456,39,0	1/1:16,0:16:13.34:89,13,0	0/1:22,0:21:1.46:106,0,1	1/1:13,0:13:9.73:44,10,0	1/1:33,0:33:19.08:82,19,0	1/1:13,0:13:15.91:70,16,0	0/0:23,0:23:54.18:0,54,856	0/0:16,0:16:27.02:0,27,401	1/1:21,0:21:41.56:210,42,0	1/1:29,0:29:41.51:194,42,0	1/1:24,0:24:29.12:145,29,0	1/1:7,0:7:5.68:28,6,0
chr10	36064128	.	TGTGTG	T	4157.74	PASS	AB=0.986;AC=21;AF=0.375;AN=56;BaseQRankSum=12.205;DP=585;FS=3.697;HRun=0;HaplotypeScore=198.7270;InbreedingCoeff=-0.1141;MQ=48.65;MQ0=6;MQRankSum=-8.289;QD=13.03;ReadPosRankSum=7.601;VQSLOD=2.1332;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,18:26:66.44:1198,66,0	0/1:7,0:8:1.64:157,0,2	0/0:65,0:25:51.26:0,51,1050	0/0:59,0:21:50.55:0,51,964	0/0:19,0:19:44.69:0,45,683	0/1:17,0:17:18.53:182,0,19	0/1:16,0:16:67.78:177,0,68	0/1:28,0:25:46.05:46,0,326	0/0:22,0:20:57.18:0,57,797	0/1:24,0:25:99:351,0,109	1/1:11,0:11:24.66:225,25,0	0/0:16,0:16:42.12:0,42,1171	0/1:13,0:12:54.88:85,0,55	0/1:11,0:11:27.22:211,0,27	0/1:13,0:13:49.95:216,0,50	0/0:16,0:16:48.15:0,48,626	0/0:23,0:22:63.21:0,63,891	0/1:12,0:12:52.36:81,0,52	0/1:20,0:19:99:130,0,241	0/1:10,0:10:52.36:65,0,52	0/1:27,0:27:99:111,0,115	0/1:14,0:15:83.35:148,0,83	0/0:23,0:21:60.21:0,60,1878	0/0:15,0:15:33.11:0,33,974	1/1:20,0:21:39.46:377,39,0	0/1:24,0:23:99:196,0,101	0/1:22,0:22:98.02:200,0,98	0/0:5,0:5:5.80:0,6,61
chr10	36064130	.	TG	T	2000.07	PASS	AB=0.697;AC=26;AF=0.464;AN=56;BaseQRankSum=9.181;DP=562;FS=8.496;HRun=1;HaplotypeScore=170.8784;InbreedingCoeff=0.1911;MQ=48.18;MQ0=8;MQRankSum=-6.768;QD=6.80;ReadPosRankSum=3.572;VQSLOD=0.5523;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:26:6.19:84,6,0	0/1:2,5:8:14.43:72,0,14	0/0:69,0:25:48.81:0,49,646	0/0:59,0:20:48.03:0,48,570	0/0:19,1:19:27.13:0,27,201	0/1:7,10:17:15.59:113,0,16	0/1:5,9:14:5.04:145,0,5	0/1:20,4:20:83.95:84,0,266	0/0:22,0:20:33.83:0,34,216	0/1:5,17:22:37.29:194,0,37	1/1:4,7:11:20.81:112,21,0	0/0:17,0:17:41.91:0,42,588	0/1:9,4:12:20.67:48,0,21	0/1:1,9:10:5.77:82,0,6	1/1:4,7:11:26.38:135,26,0	0/0:17,0:17:23.28:0,23,80	0/0:23,0:22:41.23:0,41,290	0/1:4,7:11:8.69:93,0,9	0/1:15,5:19:99:105,0,116	0/1:5,5:9:3.23:54,0,3	1/1:13,7:20:28.88:152,29,0	0/1:9,2:13:43.82:51,0,44	0/0:25,0:23:63.20:0,63,963	0/0:16,0:16:33.11:0,33,506	1/1:8,13:22:44.38:238,44,0	1/1:4,14:19:13.33:198,13,0	1/1:8,10:18:19.62:189,20,0	0/1:3,0:3:20.94:41,0,21
chr10	36064132	.	TGTG	T	6159.88	PASS	AB=0.783;AC=37;AF=0.661;AN=56;BaseQRankSum=8.754;DP=547;FS=7.774;HRun=0;HaplotypeScore=168.8607;InbreedingCoeff=0.9090;MQ=43.04;MQ0=11;MQRankSum=-7.989;QD=21.54;ReadPosRankSum=-0.663;VQSLOD=3.8563;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:25:64.85:557,65,0	1/1:2,5:7:20.89:189,21,0	0/0:67,0:22:35.63:0,36,484	0/0:57,0:18:38.05:0,38,520	0/0:18,0:17:30.21:0,30,189	1/1:7,10:17:42.31:353,42,0	1/1:6,9:15:43.52:385,44,0	1/1:19,4:19:51.76:405,52,0	0/0:22,0:20:43.85:0,44,241	1/1:5,17:22:65.15:603,65,0	1/1:4,7:11:29.10:261,29,0	0/0:18,0:18:37.74:0,38,743	1/1:8,4:11:25.29:199,25,0	1/1:2,9:11:30.51:273,31,0	1/1:3,7:10:29.70:278,30,0	0/0:17,0:17:40.66:0,41,173	0/0:22,0:21:52.86:0,53,312	1/1:3,7:10:28.81:247,29,0	0/1:13,5:17:20.96:314,0,21	1/1:4,5:8:16.74:132,17,0	1/1:12,7:18:29.74:260,30,0	1/1:11,2:13:33.15:239,33,0	0/0:24,0:22:60.20:0,60,1329	0/0:16,0:15:30.10:0,30,630	1/1:9,13:22:55.81:533,56,0	1/1:7,14:19:51.90:467,52,0	1/1:6,10:16:42.72:387,43,0	1/1:4,0:4:8.89:79,9,0
chr10	36064138	.	TTTTG	T	713.18	PASS	AB=0.984;AC=20;AF=0.357;AN=56;BaseQRankSum=10.938;DP=583;FS=6.147;HRun=0;HaplotypeScore=198.7132;InbreedingCoeff=0.0512;MQ=37.25;MQ0=14;MQRankSum=-5.354;QD=2.57;ReadPosRankSum=5.269;VQSLOD=1.3191;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:19,6:24:1.98:363,0,2	1/1:12,0:11:2.82:44,3,0	0/0:59,0:15:26.77:0,27,440	0/0:50,0:13:18.97:0,19,132	0/0:18,0:17:42.88:0,43,396	0/1:17,0:17:27.62:28,0,45	0/1:17,0:17:18.04:30,0,18	0/0:21,0:18:8.60:0,9,102	0/0:23,0:21:45.71:0,46,511	0/1:28,0:28:18.28:67,0,18	0/1:14,0:14:9.82:45,0,10	0/0:16,0:16:36.02:0,36,717	0/1:11,0:10:12.31:13,0,12	1/1:14,0:14:7.06:48,7,0	1/1:14,0:13:13.78:74,14,0	0/0:19,0:19:42.34:0,42,542	0/0:23,0:22:58.31:0,58,625	0/0:13,0:13:3.71:0,4,66	0/1:19,0:18:31.35:31,0,79	0/1:14,0:13:12.11:12,0,24	0/1:17,0:16:21.06:21,0,24	0/1:13,0:13:15.71:16,0,39	0/0:31,0:29:56.09:0,56,1388	0/0:23,0:22:38.96:0,39,746	1/1:22,0:22:13.27:65,13,0	0/1:23,0:20:11.69:12,0,39	0/1:17,0:16:18.12:18,0,27	0/0:9,0:9:16.01:0,16,78
chr10	36064142	.	GT	G	5535.64	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=7.295;DP=581;FS=4.889;HRun=6;HaplotypeScore=157.2202;InbreedingCoeff=0.9148;MQ=36.37;MQ0=16;MQRankSum=-6.802;QD=18.96;ReadPosRankSum=0.748;VQSLOD=3.1540;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:31.96:0,32,267	1/1:5,7:11:28.10:235,28,0	0/0:55,0:13:5.10:0,5,181	0/0:47,0:11:4.06:0,4,47	0/0:18,0:17:44.36:0,44,390	1/1:3,13:16:39.20:365,39,0	1/1:7,9:16:32.81:287,33,0	1/1:4,17:17:37.98:370,38,0	0/0:22,0:20:50.43:0,50,455	1/1:4,24:28:74.54:704,75,0	1/1:2,11:13:28.19:276,28,0	0/0:16,0:16:35.38:0,35,380	1/1:3,9:11:23.96:224,24,0	1/1:2,13:15:39.26:344,39,0	1/1:4,11:14:35.77:321,36,0	0/0:20,0:20:44.11:0,44,470	0/0:25,0:24:59.90:0,60,556	1/1:5,8:13:4.86:245,5,0	1/1:11,8:18:7.42:257,7,0	1/1:5,9:13:13.72:176,14,0	1/1:7,9:15:17.06:154,17,0	1/1:4,9:12:12.87:219,13,0	0/0:34,0:31:46.08:0,46,754	0/0:22,0:21:30.05:0,30,353	1/1:2,21:23:52.54:481,53,0	1/1:11,12:20:35.55:366,36,0	1/1:1,15:15:41.90:392,42,0	1/1:2,5:7:12.02:119,12,0
chr10	36064143	.	T	TG	2655.76	PASS	AB=0.953;AC=32;AF=0.571;AN=56;BaseQRankSum=9.252;DP=596;FS=4.428;HRun=1;HaplotypeScore=168.5818;InbreedingCoeff=0.5260;MQ=36.20;MQ0=17;MQRankSum=-6.290;QD=7.34;ReadPosRankSum=5.157;VQSLOD=1.1121;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:71.27:0,71,590	0/1:12,1:12:10.40:97,0,10	0/1:55,0:13:3.92:4,0,218	0/0:46,0:10:13.84:0,14,104	0/0:19,0:18:44.81:0,45,565	1/1:17,0:17:10.56:203,11,0	0/1:18,1:19:13.23:152,0,13	1/1:22,0:18:3.95:264,4,0	0/0:22,0:20:54.13:0,54,682	1/1:30,0:30:34.57:338,35,0	1/1:13,0:13:15.30:131,15,0	0/0:16,0:16:37.37:0,37,439	1/1:11,0:10:23.08:157,23,0	1/1:16,0:16:25.70:179,26,0	1/1:16,0:15:20.06:136,20,0	0/0:18,0:18:45.13:0,45,607	0/0:27,0:26:60.20:0,60,824	0/1:13,1:13:44.88:115,0,45	0/1:18,1:18:62.78:124,0,63	1/1:16,0:15:7.02:84,7,0	1/1:16,0:15:4.65:78,5,0	1/1:14,0:13:11.92:157,12,0	0/0:34,0:31:70.97:0,71,897	0/0:22,0:21:38.91:0,39,471	1/1:24,0:24:41.20:254,41,0	0/1:22,1:20:13.23:145,0,13	1/1:16,0:15:36.66:186,37,0	1/1:8,0:8:10.10:56,10,0
chr10	36064146	.	TTTG	T	6694.42	PASS	AB=0.981;AC=41;AF=0.732;AN=56;BaseQRankSum=8.682;DP=599;FS=10.685;HRun=0;HaplotypeScore=165.8590;InbreedingCoeff=0.4719;MQ=36.10;MQ0=19;MQRankSum=-6.411;QD=15.50;ReadPosRankSum=2.798;VQSLOD=4.2459;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:31,0:29:10.55:194,0,11	1/1:12,1:12:31.76:327,32,0	0/0:52,0:13:6.18:0,6,196	0/0:45,0:10:3.93:0,4,60	0/1:20,0:18:26.90:138,0,27	1/1:15,3:18:34.39:404,34,0	1/1:18,1:19:45.45:392,45,0	1/1:23,0:19:43.80:455,44,0	0/1:21,1:20:40.90:151,0,41	1/1:29,1:30:81.17:692,81,0	1/1:15,0:14:29.29:214,29,0	0/0:16,0:16:40.50:0,40,451	1/1:11,0:10:23.92:254,24,0	1/1:16,0:16:37.97:387,38,0	1/1:14,1:14:38.33:414,38,0	0/1:18,1:19:90.38:90,0,116	1/1:29,0:28:8.05:210,8,0	1/1:14,0:13:28.21:194,28,0	1/1:20,0:19:27.97:249,28,0	1/1:14,1:14:13.04:170,13,0	1/1:16,0:15:20.23:196,20,0	0/1:15,0:14:10.67:232,0,11	0/0:34,0:31:52.24:0,52,776	0/0:20,0:19:26.55:0,27,361	1/1:23,0:23:51.59:439,52,0	1/1:22,0:19:35.47:377,35,0	1/1:18,0:17:43.23:404,43,0	1/1:7,1:8:5.50:114,6,0
chr10	36064149	.	GTT	G	4232.08	PASS	AB=0.678;AC=43;AF=0.768;AN=56;BaseQRankSum=7.267;DP=584;FS=2.565;HRun=15;HaplotypeScore=161.8737;InbreedingCoeff=0.6106;MQ=35.89;MQ0=22;MQRankSum=-3.155;QD=10.00;ReadPosRankSum=3.847;VQSLOD=2.3664;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:29:35.27:174,35,0	1/1:5,8:12:26.76:200,27,0	0/0:49,0:13:17.28:0,17,139	0/0:41,0:8:4.34:0,4,34	1/1:8,0:18:27.38:129,27,0	1/1:9,8:17:7.63:192,8,0	1/1:5,10:17:40.91:293,41,0	1/1:6,12:18:16.27:248,16,0	1/1:8,0:19:32.77:140,33,0	1/1:15,13:29:36.47:357,36,0	1/1:6,5:14:12.32:114,12,0	0/0:16,0:18:29:0,29,307	1/1:6,5:10:20.86:159,21,0	1/1:7,9:17:33.22:234,33,0	1/1:3,9:14:35.03:248,35,0	1/1:9,0:19:22.02:99,22,0	1/1:6,1:28:48.21:217,48,0	1/1:10,4:13:3.99:116,4,0	0/1:11,5:16:18.64:132,0,19	1/1:4,7:13:9.19:122,9,0	1/1:7,6:13:9.86:121,10,0	0/1:7,8:16:11.94:141,0,12	0/0:31,0:31:45.94:0,46,513	0/0:13,0:17:21.03:0,21,251	1/1:9,12:23:23.33:240,23,0	1/1:12,9:17:23.28:236,23,0	1/1:7,10:17:35.67:262,36,0	0/1:4,3:9:28.27:58,0,28
chr10	36064154	.	T	TTG	367.76	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=1.270;DP=577;FS=6.397;HRun=0;HaplotypeScore=174.6113;InbreedingCoeff=0.6683;MQ=33.88;MQ0=21;MQRankSum=-1.315;QD=10.51;ReadPosRankSum=1.742;VQSLOD=2.8944;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:21,13:32:3.83:446,4,0	0/0:13,0:12:31.67:0,32,247	0/0:42,0:10:29.35:0,29,229	0/0:37,0:8:4.33:0,4,78	0/0:20,0:19:27.96:0,28,292	0/0:16,0:17:37.41:0,37,324	0/0:18,0:18:50.52:0,51,395	0/0:23,0:19:53.12:0,53,425	0/0:18,0:16:29.13:0,29,266	0/0:27,0:27:75.31:0,75,575	0/0:17,0:16:39.56:0,40,265	0/0:16,0:16:38.86:0,39,423	0/0:10,0:9:20.74:0,21,158	0/0:21,0:21:47.46:0,47,358	0/0:15,0:14:38.69:0,39,310	0/0:16,0:16:35.62:0,36,300	0/0:31,0:30:66.95:0,67,573	0/0:13,0:11:28.80:0,29,197	0/0:17,0:17:41.08:0,41,325	0/0:14,0:13:23.94:0,24,205	0/0:14,0:13:12.41:0,12,136	0/0:17,0:16:21.14:0,21,236	0/0:33,0:29:71.73:0,72,773	0/0:18,0:17:27.39:0,27,349	0/0:22,0:22:36.07:0,36,328	0/0:22,0:18:44.38:0,44,345	0/0:20,0:19:42.38:0,42,293	0/0:11,0:11:17.43:0,17,105
chr10	36064162	.	TTTG	T	875.84	PASS	AB=0.967;AC=18;AF=0.321;AN=56;BaseQRankSum=8.401;DP=519;FS=22.533;HRun=0;HaplotypeScore=148.6571;InbreedingCoeff=-0.3631;MQ=35.67;MQ0=18;MQRankSum=-3.733;QD=2.92;ReadPosRankSum=3.243;VQSLOD=1.2877;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:27:32.23:0,32,161	0/1:11,1:11:33.07:33,0,42	0/1:31,0:8:10.77:11,0,110	0/0:24,0:5:8.75:0,9,59	0/1:23,2:24:95.44:107,0,95	0/1:13,0:13:27.61:28,0,36	0/1:16,0:16:21.45:21,0,99	0/0:22,0:18:14.08:0,14,186	0/1:17,1:18:30.97:160,0,31	0/1:21,0:21:4.13:4,0,115	0/0:15,0:14:1.96:0,2,95	0/0:14,0:14:33.08:0,33,498	0/1:11,1:11:45.14:79,0,45	0/1:19,0:19:64.69:65,0,94	1/1:15,0:14:3.46:55,3,0	0/1:15,1:16:65.07:93,0,65	0/1:26,1:27:9.48:190,0,9	0/1:11,0:9:14.34:14,0,76	0/0:14,0:13:6.72:0,7,161	0/0:14,0:13:14.84:0,15,98	0/1:10,0:9:5.28:5,0,22	0/1:16,1:16:47.03:47,0,106	0/0:33,0:29:68.99:0,69,958	0/0:18,0:17:23.75:0,24,451	0/1:17,0:17:27.64:28,0,64	0/0:22,0:19:0.08:0,0,123	0/1:18,2:18:83.52:88,0,84	0/0:13,0:13:13.36:0,13,111
chr10	36064163	.	TTG	T	553.47	PASS	AB=0.958;AC=19;AF=0.339;AN=56;BaseQRankSum=9.541;DP=519;FS=37.958;HRun=0;HaplotypeScore=143.4406;InbreedingCoeff=-0.2851;MQ=35.85;MQ0=18;MQRankSum=-4.840;QD=1.91;ReadPosRankSum=3.541;VQSLOD=1.3141;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:27:37.37:0,37,169	0/1:13,0:12:5.07:28,0,5	0/1:27,0:8:12.82:13,0,78	0/1:22,0:5:10.73:11,0,32	0/0:25,0:24:25.43:0,25,198	0/1:12,1:13:39.24:52,0,39	0/1:17,0:17:29.36:29,0,48	0/0:24,0:20:4.31:0,4,139	0/0:18,0:18:10.79:0,11,102	0/1:20,1:21:54.14:54,0,82	0/0:14,0:13:1.45:0,1,65	0/0:14,0:14:32.91:0,33,384	0/1:10,2:11:43.17:65,0,43	0/1:17,2:19:65.21:79,0,65	1/1:15,0:14:6.67:35,7,0	0/0:16,0:16:12.96:0,13,136	0/0:27,0:27:21.41:0,21,110	0/1:11,1:10:42.29:42,0,77	0/1:15,1:15:33.82:34,0,141	0/1:14,0:13:21.23:21,0,31	1/1:10,0:9:1.17:21,1,0	0/1:17,0:16:39.49:39,0,84	0/0:30,0:28:68.85:0,69,783	0/0:18,0:17:24.44:0,24,344	0/1:16,1:17:35.18:58,0,35	0/1:20,1:18:45.31:45,0,79	0/1:21,0:19:80.35:85,0,80	0/0:13,0:13:3.11:0,3,87
chr10	36066080	.	AGT	A	1513.48	PASS	AB=0.900;AC=9;AF=0.161;AN=56;BaseQRankSum=9.363;DP=437;FS=0.000;HRun=0;HaplotypeScore=77.6282;InbreedingCoeff=0.8569;MQ=59.76;MQ0=3;MQRankSum=-0.292;QD=20.18;ReadPosRankSum=3.010;VQSLOD=3.6336;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,1:21:16.30:0,16,784	0/1:8,1:9:10.79:11,0,347	0/0:13,0:9:24.04:0,24,348	0/0:23,0:11:21.35:0,21,460	1/1:4,19:23:45.14:568,45,0	0/0:13,0:13:23.62:0,24,398	0/0:7,0:7:18.06:0,18,299	0/0:28,1:29:34.36:0,34,1083	1/1:2,11:13:27.09:341,27,0	0/0:18,0:18:48.16:0,48,796	0/0:16,0:16:48.16:0,48,788	0/0:12,0:12:36.12:0,36,595	0/0:7,0:7:21.07:0,21,346	0/0:14,0:14:42.14:0,42,695	0/0:15,0:15:42.14:0,42,692	1/1:0,9:9:18.06:227,18,0	1/1:2,19:21:42.13:530,42,0	0/0:43,0:43:99:0,111,1813	0/0:22,0:22:57.19:0,57,925	0/0:6,0:6:18.06:0,18,296	0/0:9,0:9:27.09:0,27,439	0/0:11,0:11:24.08:0,24,396	0/0:10,0:10:30.10:0,30,494	0/0:7,0:7:11.94:0,12,199	0/0:16,0:16:42.14:0,42,693	0/0:27,0:27:66.23:0,66,1092	0/0:13,0:12:39.12:0,39,613	0/0:10,0:10:30.10:0,30,497
chr10	36066368	.	C	CGTTT	4975.85	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-12.401;DP=616;FS=2.841;HRun=0;HaplotypeScore=134.3167;InbreedingCoeff=0.9854;MQ=72.54;MQ0=0;MQRankSum=-1.827;QD=44.43;ReadPosRankSum=-1.939;VQSLOD=4.5349;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:87.09:0,87,810	0/0:9,0:9:18.01:0,18,168	0/0:20,0:20:24.55:0,25,378	0/0:16,0:15:20.99:0,21,287	1/1:10,20:32:17.27:1213,17,0	0/0:30,0:30:75.09:0,75,698	0/0:24,0:24:47.95:0,48,435	0/0:24,0:24:36.03:0,36,332	1/1:5,14:22:42.14:985,42,0	0/0:26,0:26:48.03:0,48,447	0/0:10,0:10:27.03:0,27,251	0/0:21,0:21:48.16:0,48,761	0/0:15,0:15:30.03:0,30,279	0/0:27,0:27:51.02:0,51,467	0/0:22,0:22:42.03:0,42,391	1/1:6,13:20:45.15:1029,45,0	1/1:10,27:38:72.25:1748,72,0	0/0:16,0:16:27.03:0,27,251	0/0:20,0:20:27.02:0,27,251	0/0:12,0:12:17.84:0,18,140	0/0:19,0:19:36.03:0,36,335	0/0:19,0:19:36.03:0,36,335	0/0:14,0:14:39.13:0,39,637	0/0:33,0:33:75.26:0,75,1224	0/0:15,0:15:30.03:0,30,279	0/0:28,0:28:51.04:0,51,475	0/0:31,0:31:66.08:0,66,615	0/0:6,0:6:15.02:0,15,140
chr10	36066388	.	TG	T	14978.15	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=1.728;DP=670;FS=4.471;HRun=1;HaplotypeScore=78.5516;InbreedingCoeff=0.9970;MQ=63.59;MQ0=0;MQRankSum=-1.651;QD=36.44;ReadPosRankSum=1.761;VQSLOD=5.3793;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,41:41:99:1508,108,0	1/1:0,8:8:24.08:334,24,0	0/0:29,0:24:62.06:0,62,777	0/0:22,0:18:45.38:0,45,620	0/0:35,0:35:92.32:0,92,849	1/1:0,33:33:93.31:1297,93,0	1/1:1,25:26:29:726,29,0	1/1:0,25:25:75.18:961,75,0	0/0:24,0:24:56.89:0,57,522	1/1:1,26:27:81.26:1116,81,0	1/1:0,17:17:50.71:658,51,0	0/0:20,0:20:60.17:0,60,826	1/1:0,14:14:33.11:461,33,0	1/1:0,23:23:54.18:754,54,0	1/1:0,27:27:66.22:922,66,0	0/0:24,0:24:68.94:0,69,681	0/0:41,0:41:99:0,108,1028	1/1:0,17:17:45.15:628,45,0	1/1:0,23:21:60.17:793,60,0	1/1:0,10:10:29.99:354,30,0	1/1:0,20:20:48.16:670,48,0	1/1:0,17:17:48.16:669,48,0	0/0:24,0:24:72.20:0,72,982	0/0:40,0:40:99:0,120,1629	1/1:0,17:17:42.14:587,42,0	1/1:0,30:30:87.22:1158,87,0	1/1:0,31:31:84.28:1171,84,0	1/1:0,5:5:15.05:210,15,0
chr10	36067033	.	ATAATATATTTAAAT	A	283.75	PASS	AC=8;AF=0.444;AN=18;BaseQRankSum=0.811;DP=58;FS=6.513;HRun=0;HaplotypeScore=59.9263;MQ=99.87;MQ0=5;MQRankSum=-0.066;QD=20.27;ReadPosRankSum=-0.066;VQSLOD=0.9291;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:4,0:1:0:0,0,0	0/0:28,0:13:2.96:0,3,201	./.	1/1:1,0:1:3.01:48,3,0	./.	1/1:0,7:7:18.05:260,18,0	./.	1/1:1,0:1:3:29,3,0	./.	0/0:1,0:1:3.01:0,3,111	./.	./.	./.	./.	0/0:9,0:9:20.06:0,20,655	1/1:5,0:4:5.38:40,5,0	./.	./.	./.	./.	./.	0/0:1,0:1:3.01:0,3,212	./.	./.	./.	./.
chr10	36067034	.	TA	T	108.01	PASS	AB=1.000;AC=7;AF=0.389;AN=18;BaseQRankSum=0.258;DP=59;FS=6.965;HRun=2;HaplotypeScore=40.8645;MQ=104.39;MQ0=5;MQRankSum=0.818;QD=4.91;ReadPosRankSum=-1.635;VQSLOD=-0.1963;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/1:4,0:1:0:0,0,0	0/0:29,0:14:16.98:0,17,193	./.	1/1:0,1:1:2.99:23,3,0	./.	0/1:7,0:7:46.30:126,0,46	./.	1/1:1,0:1:3:29,3,0	./.	0/0:1,0:1:3.01:0,3,45	./.	./.	./.	./.	0/1:9,0:9:14.21:14,0,267	0/0:2,3:4:2.03:0,2,43	./.	./.	./.	./.	./.	0/0:1,0:1:3.01:0,3,45	./.	./.	./.	./.
chr10	36067755	.	GC	G	13000.52	PASS	AB=0.900;AC=47;AF=0.839;AN=56;BaseQRankSum=6.887;DP=616;FS=0.960;HRun=8;HaplotypeScore=65.9000;InbreedingCoeff=0.8623;MQ=72.24;MQ0=0;MQRankSum=-1.065;QD=24.25;ReadPosRankSum=1.902;VQSLOD=5.6443;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,27:32:72.11:695,72,0	1/1:3,6:9:15.02:145,15,0	0/1:8,1:9:35.97:36,0,92	0/0:10,0:10:23.98:0,24,236	1/1:2,7:9:24.03:232,24,0	1/1:3,18:21:51.08:493,51,0	1/1:0,23:23:66.11:637,66,0	1/1:2,15:17:42.04:399,42,0	1/1:1,18:19:51.08:492,51,0	1/1:4,27:31:81.12:777,81,0	1/1:3,12:15:30.05:290,30,0	0/0:24,0:24:69.20:0,69,823	1/1:2,23:25:65.96:637,66,0	1/1:5,30:35:84.13:811,84,0	1/1:1,20:21:57.09:550,57,0	1/1:2,21:23:57.09:551,57,0	1/1:1,37:38:99:985,102,0	1/1:1,27:28:81.13:782,81,0	1/1:1,13:14:39.06:376,39,0	1/1:3,18:21:48.07:463,48,0	1/1:3,65:68:99:1710,155,0	1/1:0,18:18:45.05:434,45,0	0/0:19,0:19:51.16:0,51,616	0/0:27,0:27:72.18:0,72,843	1/1:1,13:14:39.06:376,39,0	1/1:1,20:21:57.09:550,57,0	1/1:3,13:16:36.06:348,36,0	1/1:1,8:9:24.04:232,24,0
chr10	36068462	.	TGTGC	T	4518.11	PASS	AB=1.000;AC=48;AF=0.857;AN=56;BaseQRankSum=3.224;DP=599;FS=4.500;HRun=0;HaplotypeScore=127.2616;InbreedingCoeff=0.4292;MQ=57.61;MQ0=14;MQRankSum=-0.300;QD=8.31;ReadPosRankSum=-0.319;VQSLOD=3.8973;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,27:34:5.68:76,6,0	1/1:7,0:7:14.55:118,15,0	0/1:35,0:14:5.24:5,0,32	0/1:32,0:15:5.14:5,0,66	1/1:23,0:22:5.58:144,6,0	1/1:14,0:14:23.34:209,23,0	1/1:31,0:31:71.37:591,71,0	1/1:24,0:23:48.20:391,48,0	1/1:12,1:13:21.44:200,21,0	1/1:30,0:29:60.75:535,61,0	0/1:15,0:15:0:0,0,0	0/0:22,0:21:18.68:0,19,432	1/1:12,0:12:12:129,12,0	1/1:17,0:17:0.08:1,0,0	1/1:4,12:16:3.01:52,3,0	1/1:15,0:15:14.02:120,14,0	1/1:22,0:22:27.63:333,28,0	1/1:34,0:33:20.88:180,21,0	1/1:17,0:17:23.07:228,23,0	1/1:14,0:13:2.75:24,3,0	1/1:35,0:33:53.66:452,54,0	1/1:14,0:13:21:206,21,0	0/1:14,0:13:12.69:13,0,319	0/0:33,0:32:66.83:0,67,793	1/1:29,0:29:2.63:37,3,0	1/1:22,0:22:42.38:365,42,0	1/1:14,0:12:5.67:30,6,0	1/1:10,0:9:6.02:74,6,0
chr10	36068470	.	CGTGCGT	C	5634.78	PASS	AB=0.916;AC=43;AF=0.768;AN=56;BaseQRankSum=0.828;DP=588;FS=8.745;HRun=0;HaplotypeScore=133.7730;InbreedingCoeff=0.3134;MQ=54.87;MQ0=18;MQRankSum=-1.811;QD=10.82;ReadPosRankSum=0.294;VQSLOD=3.3375;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:35,1:34:24.18:67,0,24	1/1:10,0:10:15.65:186,16,0	0/1:29,0:9:5.11:5,0,32	0/1:28,0:11:5.14:5,0,66	0/1:20,1:20:54.39:77,0,54	1/1:12,3:16:7.25:249,7,0	1/1:34,2:36:68.13:945,68,0	1/1:22,0:21:52.46:403,52,0	0/1:11,0:11:28.87:75,0,29	1/1:7,21:29:60.02:765,60,0	0/1:1,14:15:0:0,0,0	0/0:24,0:22:47.97:0,48,666	1/1:0,13:14:12.04:242,12,0	1/1:2,15:17:0.17:1,0,0	1/1:13,1:13:2.93:20,3,0	1/1:3,1:13:14.84:231,15,0	0/1:25,0:24:72.05:227,0,72	1/1:8,25:32:15.70:262,16,0	1/1:13,0:13:23.05:294,23,0	1/1:14,0:13:2.98:33,3,0	1/1:38,0:36:19.10:645,19,0	1/1:9,1:10:20.99:217,21,0	0/0:15,0:14:29.94:0,30,590	0/0:28,0:27:68.90:0,69,1214	1/1:0,26:27:2.64:70,3,0	1/1:3,0:22:43.92:387,44,0	1/1:2,11:11:5.75:63,6,0	1/1:1,9:9:9.02:166,9,0
chr10	36068472	.	TGC	T	4552.48	PASS	AB=0.969;AC=44;AF=0.786;AN=56;BaseQRankSum=2.940;DP=575;FS=11.900;HRun=0;HaplotypeScore=110.8501;InbreedingCoeff=0.3484;MQ=54.58;MQ0=19;MQRankSum=-1.867;QD=8.89;ReadPosRankSum=1.392;VQSLOD=3.7965;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:34,2:33:21.64:41,0,22	1/1:9,1:10:14.94:121,15,0	0/1:28,0:7:5.21:5,0,32	0/1:27,0:11:5.14:5,0,66	0/1:17,3:19:10.34:180,0,10	1/1:16,0:16:4.46:177,4,0	1/1:34,3:36:74.71:620,75,0	1/1:21,0:20:48.20:390,48,0	1/1:9,1:10:10.37:155,10,0	1/1:28,0:27:65.29:540,65,0	0/1:14,0:14:0:0,0,0	0/0:24,0:22:47.52:0,48,506	1/1:14,0:14:12:129,12,0	1/1:18,0:17:0.34:0,0,0	1/1:13,0:12:2.65:19,3,0	1/1:13,0:13:14.95:119,15,0	1/1:20,6:25:54.09:611,54,0	1/1:31,0:30:15.59:137,16,0	1/1:11,2:13:23.06:246,23,0	0/0:4,10:13:2.21:0,2,7	1/1:34,3:35:23.08:434,23,0	1/1:10,1:10:20.87:182,21,0	0/1:16,0:15:17.92:18,0,313	0/0:25,0:24:36.04:0,36,801	1/1:27,0:27:2.99:23,3,0	1/1:22,0:22:40.16:302,40,0	1/1:14,0:12:5.75:43,6,0	1/1:10,0:9:8.47:55,8,0
chr10	36068474	.	CGT	C	1151.25	PASS	AB=0.959;AC=35;AF=0.700;AN=50;BaseQRankSum=6.063;DP=580;FS=5.663;HRun=0;HaplotypeScore=123.5500;InbreedingCoeff=-0.1247;MQ=53.99;MQ0=20;MQRankSum=-1.012;QD=2.43;ReadPosRankSum=1.945;VQSLOD=2.2197;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:35,1:33:26.97:27,0,46	1/1:10,1:11:5.75:60,6,0	./.	./.	0/1:20,0:19:11.52:12,0,37	0/1:16,0:16:9.18:9,0,22	0/1:29,9:37:1.88:291,0,2	1/1:17,0:19:4.71:13,5,0	0/1:10,0:10:16.23:16,0,27	1/1:26,0:27:19.23:175,19,0	./.	0/1:22,3:23:13.63:14,0,215	1/1:15,0:15:5.97:74,6,0	1/1:18,0:17:0.23:0,0,0	0/1:15,0:14:15.51:17,0,16	1/1:13,0:13:6.49:32,6,0	0/1:27,0:27:46.50:121,0,46	0/1:30,0:30:13.15:47,0,13	1/1:12,0:12:5.95:48,6,0	1/1:14,0:13:2.50:9,2,0	0/1:34,4:36:15.15:160,0,15	1/1:11,0:10:3.85:21,4,0	0/0:15,0:15:11.91:0,12,256	0/0:26,1:26:24.14:0,24,553	1/1:27,0:27:2.94:18,3,0	0/1:21,0:21:13.63:36,0,14	1/1:15,0:13:2.80:33,3,0	1/1:11,0:9:8.88:62,9,0
chr10	36068568	.	T	TG	1462.76	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=-8.513;DP=533;FS=16.625;HRun=8;HaplotypeScore=68.5030;InbreedingCoeff=0.9441;MQ=83.35;MQ0=0;MQRankSum=-0.370;QD=20.60;ReadPosRankSum=1.148;VQSLOD=2.3661;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:75.02:0,75,686	0/1:2,0:2:0:0,0,0	0/0:16,0:16:30.25:0,30,246	0/0:19,0:20:32.21:0,32,297	1/1:3,5:8:11.99:124,12,0	0/0:11,0:11:30.01:0,30,274	0/0:31,0:31:69.01:0,69,631	0/0:28,0:27:54.01:0,54,494	1/1:3,14:17:39.12:450,39,0	0/0:24,0:24:62.90:0,63,564	0/0:13,0:13:33.01:0,33,302	0/0:24,0:25:59.05:0,59,527	0/0:18,0:18:42:0,42,379	0/0:20,0:20:39.01:0,39,357	0/0:17,0:17:42.01:0,42,384	1/1:3,9:12:24.07:277,24,0	1/1:5,27:32:44.75:769,45,0	0/0:20,0:20:60.03:0,60,549	0/0:18,0:19:41.05:0,41,363	0/0:16,0:16:42.02:0,42,384	0/0:29,0:29:72.04:0,72,657	0/0:16,0:16:39.01:0,39,357	0/0:12,0:12:30.01:0,30,274	0/0:24,0:24:57.02:0,57,521	0/0:21,0:21:60.03:0,60,549	0/0:17,0:17:45.02:0,45,412	0/0:23,0:23:63.03:0,63,577	0/0:9,0:9:17.97:0,18,159
chr10	36069418	.	T	TAAAC	35420.83	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=10.757;DP=618;FS=7.938;HRun=0;HaplotypeScore=142.1753;InbreedingCoeff=0.9927;MQ=87.10;MQ0=0;MQRankSum=-14.904;QD=74.57;ReadPosRankSum=2.623;VQSLOD=6.7172;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,22:29:75.26:2118,75,0	1/1:0,11:14:33.11:953,33,0	0/0:34,0:34:93.28:0,93,1811	0/0:27,0:27:56.67:0,57,1362	1/1:0,18:19:51.18:1469,51,0	1/1:1,12:15:39.13:1126,39,0	1/1:4,11:16:45.15:1229,45,0	1/1:5,19:24:69.24:1979,69,0	1/1:2,27:30:87.30:2485,87,0	1/1:3,17:22:60.20:1603,60,0	1/1:3,14:19:45.15:1203,45,0	0/0:31,0:31:93.31:0,93,1895	1/1:5,24:29:84.29:2359,84,0	1/1:1,13:18:36.12:995,36,0	1/1:2,20:23:66.23:1904,66,0	1/1:6,14:22:51.18:1473,51,0	1/1:2,12:14:33.11:913,33,0	1/1:0,14:14:39.13:1128,39,0	1/1:2,18:22:64.07:1692,64,0	1/1:3,14:17:51.17:1394,51,0	1/1:8,17:25:60.21:1599,60,0	1/1:5,16:23:66.23:1832,66,0	0/0:16,0:16:45.15:0,45,930	0/0:35,0:35:99:0,102,2096	1/1:1,16:17:48.16:1387,48,0	1/1:2,15:21:54.17:1441,54,0	1/1:3,29:33:99:2792,99,0	1/1:0,6:6:12.04:347,12,0
chr10	36069839	.	CCAAA	C	224.74	PASS	AB=0.969;AC=16;AF=0.286;AN=56;BaseQRankSum=8.974;DP=353;FS=43.594;HRun=0;HaplotypeScore=68.8397;InbreedingCoeff=-0.2813;MQ=43.22;MQ0=31;MQRankSum=1.835;QD=1.20;ReadPosRankSum=-0.435;VQSLOD=-0.1567;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:24:39.42:0,39,422	0/1:7,0:7:5.58:6,0,64	1/1:8,0:1:2.80:13,3,0	0/1:13,0:7:6.55:7,0,84	0/1:17,0:15:18.12:18,0,82	0/1:13,0:12:6.48:6,0,122	0/1:18,0:12:37.33:37,0,73	0/1:21,1:16:28.63:29,0,142	0/1:5,0:5:23.16:36,0,23	0/0:10,0:10:2.48:0,2,73	0/1:10,0:10:28.41:28,0,34	0/0:10,0:10:27.05:0,27,320	0/1:7,1:7:6.73:7,0,85	0/1:12,0:11:4.24:4,0,139	0/1:17,0:17:36.89:37,0,177	0/0:4,0:4:10.75:0,11,70	0/0:26,0:21:6.68:0,7,185	0/0:14,0:12:3.39:0,3,170	0/0:11,0:8:5.89:0,6,98	0/0:15,0:13:16.34:0,16,187	0/0:8,0:6:12.35:0,12,94	0/0:6,0:6:14.06:0,14,118	0/0:10,0:9:23.92:0,24,243	0/0:9,0:10:24:0,24,302	0/1:8,0:8:49.89:50,0,55	0/1:12,3:13:46.97:47,0,161	0/1:13,1:13:47.99:48,0,157	0/0:12,0:9:21.32:0,21,195
chr10	36069969	.	G	GAA	8370.94	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-8.537;DP=543;FS=19.828;HRun=9;HaplotypeScore=70.3515;InbreedingCoeff=0.9725;MQ=69.35;MQ0=8;MQRankSum=-1.293;QD=25.44;ReadPosRankSum=0.184;VQSLOD=2.7163;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:75.14:0,75,789	1/1:1,6:7:5.69:82,6,0	0/0:32,0:15:38.98:0,39,371	0/0:24,0:14:33.07:0,33,331	0/0:14,0:14:33.06:0,33,349	1/1:1,10:11:21.07:323,21,0	1/1:2,13:14:21.07:324,21,0	1/1:7,16:21:47.60:626,48,0	0/0:13,0:13:27.03:0,27,287	1/1:6,20:28:65.04:883,65,0	1/1:5,11:18:29.54:379,30,0	0/0:8,0:8:18.02:0,18,191	1/1:5,6:11:18.06:277,18,0	1/1:5,17:21:35.99:523,36,0	1/1:6,12:17:26.96:385,27,0	0/0:10,0:11:17.97:0,18,239	0/0:35,0:34:87.19:0,87,926	1/1:6,21:28:54.17:796,54,0	1/1:2,24:27:77.59:1092,78,0	1/1:5,11:18:33.11:490,33,0	1/1:2,11:11:21.07:323,21,0	1/1:4,11:16:27.67:325,28,0	0/0:18,0:18:33.02:0,33,345	0/0:26,0:26:45.07:0,45,478	1/1:6,14:22:27.84:386,28,0	1/1:4,15:20:46.33:629,46,0	1/1:6,8:16:24.04:343,24,0	1/1:1,11:12:12.04:185,12,0
chr10	36070984	.	G	GA	22652.66	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-9.880;DP=665;FS=0.000;HRun=1;HaplotypeScore=74.7931;InbreedingCoeff=0.9953;MQ=80.39;MQ0=0;MQRankSum=-4.009;QD=40.67;ReadPosRankSum=2.581;VQSLOD=5.3725;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,48:51:99:2068,138,0	1/1:0,13:13:39.13:580,39,0	0/0:19,0:19:48.13:0,48,584	0/0:21,0:20:54.17:0,54,693	1/1:1,23:24:66.22:988,66,0	1/1:0,19:18:51.17:764,51,0	1/1:1,16:17:48.13:695,48,0	1/1:2,28:30:84.28:1260,84,0	1/1:1,23:24:69.23:1033,69,0	1/1:3,22:25:63.21:944,63,0	1/1:1,9:10:21.07:314,21,0	0/0:16,0:16:45.13:0,45,569	1/1:0,22:22:54.18:809,54,0	1/1:4,15:19:45.15:673,45,0	1/1:0,29:29:84.28:1259,84,0	1/1:0,23:23:57.19:854,57,0	1/1:0,35:35:96.32:1439,96,0	1/1:0,27:27:81.27:1208,81,0	1/1:1,18:19:57.19:848,57,0	1/1:0,17:17:48.12:694,48,0	1/1:2,45:47:99:1934,129,0	1/1:2,21:23:63.21:938,63,0	0/0:22,0:22:60.19:0,60,775	0/0:30,0:30:84.27:0,84,1089	1/1:0,17:17:48.16:719,48,0	1/1:0,27:27:81.25:1192,81,0	1/1:1,29:31:81.27:1214,81,0	1/1:0,8:8:15.05:225,15,0
chr10	36071334	.	CAAAAA	C	4341.92	PASS	AB=1.000;AC=41;AF=0.820;AN=50;BaseQRankSum=2.591;DP=252;FS=0.000;HRun=9;HaplotypeScore=125.6396;InbreedingCoeff=0.1738;MQ=75.82;MQ0=2;MQRankSum=-2.022;QD=19.56;ReadPosRankSum=4.859;VQSLOD=1.2408;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,6:12:6.01:116,6,0	1/1:3,1:4:3.01:52,3,0	0/1:17,0:8:83.43:83,0,192	0/1:18,0:12:99:197,0,124	0/1:11,0:11:0.15:8,0,0	1/1:4,3:7:6.01:103,6,0	1/1:13,3:16:21.06:384,21,0	./.	1/1:10,0:10:11.36:213,11,0	1/1:9,1:10:24.08:447,24,0	./.	1/1:14,0:13:17.98:225,18,0	1/1:3,2:5:12.04:219,12,0	./.	1/1:11,1:12:6:107,6,0	1/1:8,0:8:15.04:250,15,0	1/1:7,1:8:9.03:162,9,0	1/1:4,1:5:12.01:189,12,0	1/1:12,2:14:32.01:603,32,0	0/0:6,0:6:0:0,0,0	0/0:8,2:10:3.11:0,3,8	0/0:4,3:7:0:0,0,0	1/1:10,0:11:5.94:70,6,0	1/1:6,1:7:3.01:40,3,0	1/1:11,0:11:3:58,3,0	1/1:14,0:14:27.08:484,27,0	1/1:3,3:6:12.04:218,12,0	1/1:0,2:2:6.02:116,6,0
chr10	36071337	.	AAAAAAAT	A	5423.56	PASS	AB=0.748;AC=42;AF=0.875;AN=48;BaseQRankSum=1.656;DP=206;FS=1.326;HRun=0;HaplotypeScore=111.3848;InbreedingCoeff=-0.0180;MQ=78.04;MQ0=3;MQRankSum=-2.378;QD=28.10;ReadPosRankSum=4.435;VQSLOD=4.6267;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,3:9:6:67,6,0	1/1:1,3:4:3.01:47,3,0	0/1:14,3:8:99:137,0,228	0/1:12,4:10:99:301,0,199	0/1:0,9:9:1.63:10,0,2	1/1:3,4:7:6.01:99,6,0	1/1:3,8:11:21.06:407,21,0	./.	1/1:0,8:8:11.69:296,12,0	1/1:1,7:8:24.08:581,24,0	./.	1/1:0,12:12:18.05:341,18,0	1/1:2,3:5:12.04:231,12,0	./.	1/1:1,6:7:6.01:118,6,0	1/1:0,8:8:15.04:330,15,0	1/1:1,5:6:9.03:226,9,0	1/1:1,4:5:12.04:256,12,0	1/1:2,10:12:31.56:770,32,0	./.	0/1:4,1:5:4.32:13,0,4	0/0:3,3:6:0:0,0,0	1/1:1,6:8:8.21:90,8,0	1/1:1,4:6:3.01:68,3,0	1/1:0,11:11:3:56,3,0	1/1:0,10:10:27.09:630,27,0	1/1:3,2:5:12.04:235,12,0	1/1:2,0:2:6.02:115,6,0
chr10	36071356	.	TGC	T	561.09	PASS	AB=1.000;AC=35;AF=0.795;AN=44;BaseQRankSum=-1.672;DP=239;FS=16.873;HRun=0;HaplotypeScore=118.3459;InbreedingCoeff=0.2575;MQ=64.83;MQ0=4;MQRankSum=-1.755;QD=2.74;ReadPosRankSum=-1.849;VQSLOD=1.3165;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:4.59:0,5,19	0/0:2,0:2:0.89:0,1,2	0/1:33,0:9:5.19:5,0,40	0/1:28,0:13:13.06:13,0,33	1/1:6,0:6:2.04:6,2,0	1/1:10,1:10:0.48:3,0,0	1/1:12,1:12:7.57:28,8,0	./.	1/1:7,1:8:11.41:78,11,0	1/1:7,0:6:12.38:63,12,0	./.	1/1:14,0:13:3.33:53,3,0	1/1:4,0:4:1.73:18,2,0	./.	0/0:5,2:7:0.83:0,1,2	1/1:7,1:8:9.20:41,9,0	1/1:7,0:6:8.89:60,9,0	1/1:3,0:3:5.45:28,5,0	1/1:11,0:10:16.18:101,16,0	./.	./.	./.	0/1:11,0:11:1.53:7,0,2	1/1:14,0:11:5.94:42,6,0	1/1:12,0:12:0.89:2,1,0	1/1:9,0:8:14.84:84,15,0	1/1:4,0:4:4.77:32,5,0	1/1:2,0:2:1.77:4,2,0
chr10	36071367	.	GTTT	G	1231.76	PASS	AB=0.785;AC=33;AF=0.750;AN=44;BaseQRankSum=6.423;DP=239;FS=11.465;HRun=4;HaplotypeScore=110.0771;InbreedingCoeff=0.3066;MQ=64.56;MQ0=6;MQRankSum=-1.822;QD=9.93;ReadPosRankSum=4.011;VQSLOD=-0.5514;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:7:8.96:0,9,109	1/1:1,1:2:2.96:19,3,0	0/0:41,1:9:12.03:0,12,335	0/0:46,0:22:60.09:0,60,879	1/1:1,3:5:3.01:38,3,0	1/1:4,6:9:8.50:61,9,0	1/1:4,7:10:12.80:126,13,0	./.	1/1:2,4:6:8.89:143,9,0	1/1:3,1:4:7.27:88,7,0	./.	0/1:8,8:15:51.10:157,0,51	1/1:3,0:3:8.85:64,9,0	./.	1/1:1,2:3:2.96:19,3,0	1/1:3,5:8:10.02:122,10,0	1/1:3,1:4:3.90:55,4,0	1/1:3,1:4:2.16:23,2,0	1/1:5,3:7:17.78:219,18,0	./.	./.	./.	0/1:9,3:12:46.22:46,0,119	0/1:14,2:13:31.79:32,0,124	0/0:3,6:9:1.25:0,1,3	1/1:4,1:4:6.91:91,7,0	1/1:3,0:3:6.80:67,7,0	1/1:2,0:2:0.89:2,1,0
chr10	36071368	.	T	TG	1114.56	PASS	AB=0.889;AC=29;AF=0.690;AN=42;BaseQRankSum=5.109;DP=222;FS=12.178;HRun=1;HaplotypeScore=105.3160;InbreedingCoeff=0.3635;MQ=66.53;MQ0=4;MQRankSum=-2.585;QD=11.37;ReadPosRankSum=3.767;VQSLOD=0.8802;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:5:6.85:0,7,60	1/1:1,0:2:3.01:43,3,0	0/0:43,0:9:11.57:0,12,199	0/0:45,0:22:59.03:0,59,673	1/1:4,1:5:3.01:30,3,0	1/1:7,1:8:1.12:79,1,0	1/1:7,3:9:11.90:134,12,0	./.	1/1:5,0:5:8.70:90,9,0	1/1:2,1:2:6.02:75,6,0	./.	0/1:16,0:15:28.26:28,0,28	1/1:0,2:3:9.03:130,9,0	./.	1/1:2,0:3:3.01:43,3,0	1/1:6,2:8:9.11:74,9,0	1/1:3,0:3:5.91:40,6,0	0/1:2,2:4:0.92:39,0,1	1/1:5,2:7:18.04:212,18,0	./.	./.	./.	0/1:11,0:11:43.93:51,0,44	0/0:14,1:13:5.87:0,6,78	0/0:9,0:9:0:0,0,0	1/1:3,1:3:6.90:70,7,0	1/1:0,1:3:9.03:112,9,0	./.
chr10	36071376	.	GTGTGAGCGTTT	G	1111.78	PASS	AB=1.000;AC=34;AF=0.739;AN=46;BaseQRankSum=6.171;DP=252;FS=4.305;HRun=0;HaplotypeScore=142.3267;InbreedingCoeff=0.2706;MQ=61.08;MQ0=8;MQRankSum=-2.243;QD=7.67;ReadPosRankSum=-0.491;VQSLOD=2.0368;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,0:5:3.01:57,3,0	1/1:2,0:2:3.01:50,3,0	0/0:43,0:9:22.75:0,23,319	0/0:49,0:22:28.27:0,28,670	1/1:6,0:6:3:27,3,0	1/1:9,1:9:6.65:119,7,0	1/1:9,1:9:6.02:139,6,0	./.	1/1:11,0:11:12.42:110,12,0	1/1:4,0:3:9.03:148,9,0	./.	0/1:17,0:16:46.67:76,0,47	0/1:3,0:3:4.67:34,0,5	./.	1/1:1,2:3:3.01:47,3,0	1/1:11,0:11:5.30:66,5,0	1/1:5,0:5:9.90:132,10,0	1/1:3,0:4:3.85:23,4,0	1/1:8,0:7:8.55:96,9,0	./.	0/0:1,0:1:0:0,0,0	1/1:2,0:2:2.80:13,3,0	0/1:12,0:12:0.45:0,0,209	0/1:23,0:20:5.69:6,0,344	0/0:9,0:8:1.25:0,1,3	1/1:3,0:2:2.37:8,2,0	1/1:5,0:5:6:92,6,0	./.
chr10	36071379	.	TGAGC	T	895.27	PASS	AB=0.884;AC=26;AF=0.591;AN=44;BaseQRankSum=2.328;DP=241;FS=11.343;HRun=0;HaplotypeScore=124.3509;InbreedingCoeff=0.2474;MQ=60.26;MQ0=10;MQRankSum=-1.277;QD=7.22;ReadPosRankSum=-2.360;VQSLOD=1.5405;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:5,0:5:2.04:6,2,0	0/0:2,0:2:0:0,0,0	0/0:45,0:10:22.55:0,23,377	0/0:46,0:21:61.13:0,61,760	1/1:5,0:5:2.96:26,3,0	1/1:10,0:9:0.82:7,1,0	1/1:8,0:7:4.91:21,5,0	./.	1/1:11,0:11:13.82:142,14,0	1/1:4,0:3:9.02:89,9,0	./.	0/1:10,5:15:21.26:181,0,21	0/0:3,0:3:0.19:0,0,3	./.	0/0:3,0:3:0.89:0,1,2	1/1:8,1:9:7.56:68,8,0	1/1:6,0:5:7.06:92,7,0	1/1:4,0:4:3.90:39,4,0	0/1:6,0:5:1.45:5,0,1	./.	0/0:2,0:1:0:0,0,0	1/1:2,0:2:3:26,3,0	0/1:9,2:11:28.64:29,0,129	0/1:24,1:22:29.71:283,0,30	./.	1/1:2,0:2:2.03:6,2,0	0/0:5,0:5:3.93:0,4,17	./.
chr10	36071380	.	GAGCGTTT	G	1096.64	PASS	AB=0.938;AC=31;AF=0.738;AN=42;BaseQRankSum=6.055;DP=222;FS=2.911;HRun=0;HaplotypeScore=119.2387;InbreedingCoeff=0.4023;MQ=62.24;MQ0=10;MQRankSum=-2.804;QD=13.21;ReadPosRankSum=-0.053;VQSLOD=2.7902;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:0,3:4:3.01:57,3,0	1/1:1,1:2:3.01:50,3,0	0/0:45,0:10:22.61:0,23,404	0/0:48,0:21:59.35:0,59,817	1/1:2,0:3:3:28,3,0	1/1:3,6:8:8.93:102,9,0	1/1:1,4:4:6.02:118,6,0	./.	1/1:9,2:11:13.45:110,13,0	1/1:0,4:3:9.03:233,9,0	./.	0/1:14,1:14:64.99:74,0,65	1/1:3,0:3:6.83:32,7,0	./.	1/1:3,0:3:3.01:47,3,0	1/1:6,0:6:3.48:58,3,0	1/1:6,0:5:9.88:164,10,0	1/1:2,1:3:5.85:43,6,0	1/1:3,0:2:5.98:54,6,0	./.	0/0:2,0:1:0:0,0,0	1/1:0,1:2:1.55:4,2,0	0/0:10,0:11:0.11:0,0,266	0/0:21,0:22:6.02:0,6,290	./.	./.	1/1:2,2:4:5.12:55,5,0	./.
chr10	36071382	.	GCGT	G	422.35	PASS	AB=1.000;AC=23;AF=0.575;AN=40;BaseQRankSum=3.333;DP=219;FS=3.319;HRun=0;HaplotypeScore=114.5551;InbreedingCoeff=0.4891;MQ=62.61;MQ0=9;MQRankSum=-2.540;QD=7.28;ReadPosRankSum=0.082;VQSLOD=2.7725;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:4:2.96:19,3,0	1/1:2,0:2:2.84:14,3,0	0/0:44,0:10:23.93:0,24,420	0/0:49,0:22:60.35:0,60,924	1/1:3,0:3:2.97:20,3,0	1/1:9,0:8:1.01:24,1,0	1/1:5,0:4:5.80:42,6,0	./.	1/1:10,1:11:8.21:105,8,0	1/1:4,0:3:9.03:124,9,0	./.	0/0:14,1:14:1.17:0,1,64	0/0:3,0:3:8.47:0,8,59	./.	1/1:3,0:3:2.68:11,3,0	1/1:4,2:6:2.92:17,3,0	1/1:5,1:5:10.27:117,10,0	0/1:3,0:3:15.08:15,0,19	1/1:2,0:2:5.38:56,5,0	./.	./.	0/0:2,0:2:2.37:0,2,8	0/0:11,0:11:17.46:0,17,248	0/0:23,1:21:21.56:0,22,157	./.	./.	0/0:4,0:4:2.70:0,3,12	./.
chr10	36071384	.	GT	G	84.90	PASS	AB=0.880;AC=15;AF=0.375;AN=40;BaseQRankSum=2.258;DP=224;FS=20.757;HRun=4;HaplotypeScore=114.4800;InbreedingCoeff=0.2675;MQ=62.19;MQ0=11;MQRankSum=-1.070;QD=1.85;ReadPosRankSum=0.483;VQSLOD=-0.7142;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:4,0:4:0:0,0,0	1/1:2,0:2:0.47:1,0,0	0/0:44,0:11:0.19:0,0,238	0/0:51,0:22:57.84:0,58,661	1/1:3,0:3:0.89:2,1,0	0/0:9,0:8:4.21:0,4,25	0/1:5,0:4:1.51:7,0,2	./.	0/1:7,4:11:10.78:48,0,11	1/1:4,0:3:8.94:66,9,0	./.	0/0:16,0:15:5.68:0,6,52	0/0:3,0:3:8.99:0,9,88	./.	1/1:3,0:3:0.47:1,0,0	1/1:5,1:6:0.32:1,0,0	0/1:3,2:5:3.81:54,0,4	0/0:3,0:3:5.85:0,6,47	0/1:2,0:2:9.53:10,0,13	./.	./.	0/0:2,0:2:2.22:0,2,7	0/0:12,0:12:18.04:0,18,222	0/0:24,0:21:28.13:0,28,269	./.	./.	0/0:4,0:4:5.82:0,6,49	./.
chr10	36071387	.	TTGTGTG	T	85.86	PASS	AB=0.971;AC=12;AF=0.240;AN=50;BaseQRankSum=3.568;DP=290;FS=0.000;HRun=0;HaplotypeScore=120.4338;InbreedingCoeff=0.2285;MQ=56.27;MQ0=13;MQRankSum=-0.093;QD=0.58;ReadPosRankSum=0.711;VQSLOD=2.1397;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:8,0:8:0.09:0,0,0	./.	0/1:46,1:11:7.95:8,0,44	0/1:52,1:22:77.48:117,0,77	0/0:3,0:3:0:0,0,0	1/1:11,0:10:3.27:9,3,0	1/1:5,0:4:1.55:4,2,0	0/0:9,0:6:15.04:0,15,212	0/0:14,0:13:5.43:0,5,52	0/0:5,0:4:11.43:0,11,84	0/0:3,0:3:0.47:0,0,1	0/1:15,1:15:7.80:8,0,60	0/0:6,0:6:5.36:0,5,21	1/1:2,0:1:0.89:2,1,0	0/0:6,0:6:0:0,0,0	1/1:6,0:6:3.01:44,3,0	0/0:7,0:6:5.23:0,5,26	0/0:3,0:3:3.35:0,3,16	0/0:2,0:2:3:0,3,29	./.	0/0:12,0:9:2.84:0,3,30	0/0:6,0:6:2.44:0,2,10	0/0:14,1:15:26.93:0,27,606	0/0:23,1:21:23.48:0,23,937	./.	0/0:6,0:4:5.61:0,6,59	0/0:5,0:5:3.90:0,4,71	0/0:3,0:3:6.28:0,6,68
chr10	36071408	.	T	TG	765.35	PASS	AB=0.977;AC=26;AF=0.500;AN=52;BaseQRankSum=1.922;DP=328;FS=14.444;HRun=1;HaplotypeScore=86.2711;InbreedingCoeff=0.4404;MQ=34.29;MQ0=22;MQRankSum=-3.555;QD=6.77;ReadPosRankSum=1.478;VQSLOD=-0.5835;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:5:0.94:0,1,2	1/1:4,0:3:3:25,3,0	0/0:45,0:7:14.54:0,15,178	0/0:61,0:12:17.93:0,18,142	1/1:4,0:3:2.54:38,3,0	0/1:9,1:9:0.21:0,0,1	0/1:6,0:6:0.01:0,0,0	1/1:8,3:7:18.05:221,18,0	0/1:14,0:13:8.63:23,0,9	0/1:9,0:8:42.95:84,0,43	0/0:2,3:5:0.32:0,0,0	0/0:16,0:15:15.12:0,15,157	1/1:6,1:7:14.89:147,15,0	./.	0/0:6,1:7:0:0,0,0	1/1:7,0:7:2.67:15,3,0	1/1:7,0:8:0.49:36,0,0	1/1:1,0:1:3.01:31,3,0	0/0:8,0:6:5.75:0,6,50	0/0:4,1:5:0.47:0,0,1	1/1:12,3:12:0.47:1,0,0	0/0:4,4:8:2.95:0,3,23	0/0:15,0:15:33.49:0,33,396	0/0:32,0:29:57.87:0,58,718	./.	1/1:4,3:5:4.53:68,5,0	1/1:4,1:5:6.02:76,6,0	1/1:1,3:4:12.04:146,12,0
chr10	36071410	.	TTG	T	243.23	PASS	AB=0.969;AC=12;AF=0.231;AN=52;BaseQRankSum=2.507;DP=360;FS=0.000;HRun=0;HaplotypeScore=89.1582;InbreedingCoeff=0.4599;MQ=31.16;MQ0=25;MQRankSum=-0.190;QD=3.80;ReadPosRankSum=0.181;VQSLOD=2.2380;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:5:0:0,0,0	1/1:2,0:4:2.74:12,3,0	0/0:46,0:7:16.70:0,17,183	0/0:59,0:9:8.93:0,9,69	0/1:4,0:3:3.76:11,0,4	0/1:12,0:11:0.01:0,0,0	0/0:10,0:9:0:0,0,0	0/0:18,0:11:20.07:0,20,107	1/1:12,4:15:20.58:167,21,0	0/0:14,0:11:11.03:0,11,54	0/0:5,0:5:0.47:0,0,1	0/0:18,0:17:17.45:0,17,174	0/0:8,0:7:1.12:0,1,4	1/1:3,0:2:0.89:2,1,0	0/1:9,0:9:0:0,0,0	0/1:6,1:7:3.10:39,0,3	1/1:8,0:7:12.03:133,12,0	./.	0/0:8,0:6:3.93:0,4,12	0/0:5,0:5:0:0,0,0	0/0:16,0:13:0.21:0,0,0	0/0:9,0:9:1.65:0,2,5	0/0:15,0:15:26.34:0,26,288	0/0:33,0:31:55.83:0,56,831	./.	0/0:11,0:9:0.84:0,1,18	0/0:5,0:5:4.47:0,4,23	0/0:4,0:4:7.38:0,7,34
chr10	36071418	.	GTGTGTGTTTTTTT	G	989.63	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=-0.617;DP=400;FS=1.616;HRun=0;HaplotypeScore=111.9579;InbreedingCoeff=0.3150;MQ=30.55;MQ0=31;MQRankSum=-2.441;QD=8.39;ReadPosRankSum=1.185;VQSLOD=2.1010;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:7:8.17:0,8,25	1/1:5,0:4:2.90:16,3,0	0/0:44,0:7:18.94:0,19,421	0/0:60,0:8:12.04:0,12,221	0/0:4,0:3:2.70:0,3,7	0/0:10,0:10:3.80:0,4,9	0/0:13,0:11:4.51:0,5,13	0/1:24,0:14:34.73:182,0,35	0/1:18,0:17:2.03:2,0,248	1/1:16,0:12:13.16:219,13,0	0/0:5,0:5:4.26:0,4,18	0/0:17,0:16:26.01:0,26,600	0/1:11,0:9:18.16:100,0,18	1/1:4,0:2:3.01:30,3,0	0/0:9,0:8:0.89:0,1,2	1/1:10,0:10:8.90:115,9,0	0/0:10,0:9:5.34:0,5,165	0/0:1,0:1:3.01:0,3,60	0/1:13,0:8:57:64,0,57	0/0:5,0:5:0.47:0,0,1	0/0:18,0:14:11.11:0,11,44	0/0:11,0:10:12.46:0,12,56	0/0:15,0:15:28.45:0,28,924	0/0:37,0:31:78.42:0,78,3370	0/0:6,0:5:2.68:0,3,11	1/1:9,4:11:15.39:383,15,0	0/0:10,0:8:12.37:0,12,140	0/1:4,0:4:32.89:33,0,109
chr10	36071422	.	GTGTTTT	G	479.44	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=2.182;DP=406;FS=2.634;HRun=0;HaplotypeScore=90.6414;InbreedingCoeff=0.2399;MQ=30.41;MQ0=40;MQRankSum=-0.748;QD=4.36;ReadPosRankSum=2.607;VQSLOD=1.2615;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:7:6.72:0,7,31	1/1:6,0:4:0.47:1,0,0	0/0:46,0:9:24.52:0,25,489	0/0:62,0:8:17.99:0,18,333	1/1:3,1:3:1.40:14,1,0	0/0:10,0:10:2.19:0,2,6	0/0:12,0:10:2.29:0,2,5	0/1:26,0:15:16.38:16,0,156	1/1:15,2:17:19.90:218,20,0	0/1:16,0:13:28.67:62,0,29	0/0:5,0:5:2.50:0,2,6	0/0:17,0:14:25.74:0,26,547	0/0:11,0:9:8.36:0,8,31	0/0:4,0:2:2.37:0,2,8	0/0:8,0:7:0.47:0,0,1	0/1:10,0:10:3.93:55,0,4	1/1:10,1:10:7.71:139,8,0	0/0:1,0:1:3:0,3,25	0/0:14,0:8:2.05:0,2,57	0/0:5,0:5:0:0,0,0	0/0:16,0:12:7.37:0,7,19	0/0:12,0:11:5.63:0,6,14	0/0:12,0:12:30.03:0,30,728	0/0:39,0:31:82.43:0,82,2287	0/0:5,0:4:1.55:0,2,4	0/1:13,0:11:10.83:99,0,11	0/0:10,0:8:4.89:0,5,85	0/1:6,0:4:11.76:12,0,67
chr10	36071721	.	G	GCACA	3987.77	PASS	AB=0.824;AC=36;AF=0.750;AN=48;BaseQRankSum=-1.699;DP=518;FS=0.000;HRun=0;HaplotypeScore=101.4138;InbreedingCoeff=0.1373;MQ=61.53;MQ0=11;MQRankSum=-0.384;QD=9.87;ReadPosRankSum=-3.021;VQSLOD=2.2138;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:35,0:36:15.67:74,0,16	1/1:8,0:8:6:66,6,0	./.	./.	0/0:18,0:18:1.24:0,1,3	./.	1/1:22,4:26:24.08:465,24,0	1/1:25,0:25:12.66:125,13,0	1/1:13,0:21:7.92:88,8,0	1/1:9,8:21:32.85:485,33,0	0/1:6,2:8:34.21:95,0,34	0/0:17,0:18:24.07:0,24,336	0/1:9,3:15:33.26:182,0,33	1/1:8,6:16:11.50:165,12,0	0/1:10,0:15:77.40:77,0,122	1/1:9,0:17:10.59:161,11,0	1/1:16,0:16:4.52:24,5,0	1/1:10,10:22:26.83:576,27,0	1/1:18,1:19:18.05:275,18,0	1/1:6,0:8:2.74:12,3,0	0/1:21,1:35:34.82:83,0,35	1/1:7,1:9:8.77:151,9,0	0/0:10,0:10:3.01:0,3,46	0/1:29,0:32:6.57:7,0,434	1/1:7,5:13:3.01:71,3,0	1/1:6,1:18:29.23:453,29,0	1/1:9,9:22:25.75:351,26,0	./.
chr10	36072938	.	C	CCACCATCAT	4908.49	PASS	AB=0.953;AC=36;AF=0.667;AN=54;BaseQRankSum=4.265;DP=440;FS=14.131;HRun=0;HaplotypeScore=209.7749;InbreedingCoeff=0.1025;MQ=41.95;MQ0=11;MQRankSum=-3.146;QD=15.10;ReadPosRankSum=0.688;VQSLOD=2.9804;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:15:10.20:172,10,0	0/1:10,0:10:27.59:215,0,28	0/0:19,0:6:10.55:0,11,85	0/0:21,0:13:5.96:0,6,100	./.	1/1:14,0:14:0.19:140,0,0	1/1:19,0:19:2.79:94,3,0	1/1:23,0:22:1.03:518,1,0	0/1:4,6:10:11.63:300,0,12	0/1:26,0:26:99:370,0,109	1/1:13,0:12:1.95:49,2,0	0/0:19,0:18:3.04:0,3,582	0/1:20,0:20:12.94:469,0,13	1/1:12,0:12:20.85:362,21,0	1/1:18,0:18:11.41:229,11,0	1/1:14,0:14:26.33:395,26,0	1/1:5,0:5:7.25:71,7,0	1/1:8,0:8:3.01:94,3,0	1/1:11,0:8:9.33:124,9,0	0/1:19,0:19:19.16:188,0,19	1/1:16,0:14:6.02:118,6,0	0/1:8,0:8:11.77:12,0,22	0/0:15,0:15:26.85:0,27,491	0/0:31,0:31:26.01:0,26,569	0/1:20,0:20:14.27:187,0,14	0/1:19,0:19:99:341,0,116	1/1:19,0:19:26.58:361,27,0	1/1:4,0:3:2.90:99,3,0
chr10	36072941	.	CCACCACCACCACCACCGACAACAT	C	8464.67	PASS	AB=0.833;AC=34;AF=0.630;AN=54;BaseQRankSum=1.033;DP=433;FS=48.795;HRun=0;HaplotypeScore=266.1799;InbreedingCoeff=-0.1783;MQ=41.15;MQ0=12;MQRankSum=-1.455;QD=22.88;ReadPosRankSum=0.934;VQSLOD=2.3692;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:16:17.53:205,18,0	0/1:5,4:9:37.93:385,0,38	0/0:18,0:5:12.02:0,12,182	0/1:22,0:10:15.26:15,0,112	./.	0/1:4,10:14:70.45:330,0,70	1/1:5,14:19:8.55:208,9,0	1/1:6,17:20:42.52:874,43,0	0/1:9,0:9:52.01:52,0,105	0/1:26,0:26:99:407,0,405	1/1:5,8:12:6.49:87,6,0	0/0:21,0:20:48.03:0,48,1829	1/1:12,8:20:33.93:1941,34,0	0/1:6,5:11:67.35:720,0,67	1/1:3,14:18:18.84:492,19,0	0/1:14,0:14:99:196,0,342	0/1:5,0:5:45.99:46,0,158	1/1:1,6:7:3.01:197,3,0	0/1:6,0:6:40.88:102,0,41	1/1:16,3:19:9.84:255,10,0	1/1:5,10:13:6.01:222,6,0	1/1:8,0:8:4.20:19,4,0	0/0:14,0:14:29.32:0,29,1183	0/1:31,0:31:11.22:11,0,1470	0/1:8,10:18:36.51:262,0,37	0/1:16,2:18:99:612,0,252	0/1:7,13:20:99:639,0,270	0/1:3,1:3:50.72:187,0,51
chr10	36072956	.	CCGACAA	C	5317.31	PASS	AB=0.934;AC=46;AF=0.852;AN=54;BaseQRankSum=3.859;DP=393;FS=33.775;HRun=0;HaplotypeScore=186.3499;InbreedingCoeff=0.2458;MQ=40.27;MQ0=9;MQRankSum=-4.519;QD=14.77;ReadPosRankSum=0.436;VQSLOD=2.8416;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,6:12:11.97:169,12,0	1/1:7,0:9:18.05:214,18,0	0/0:15,0:3:5.74:0,6,114	0/1:22,0:5:12.09:12,0,41	./.	0/1:13,2:16:1.66:84,0,2	1/1:14,3:17:9.03:179,9,0	1/1:20,0:18:17.91:185,18,0	1/1:7,0:7:18.50:162,18,0	1/1:5,7:15:38.77:644,39,0	1/1:12,2:13:5.50:85,6,0	0/1:23,0:22:99:280,0,108	1/1:10,3:16:31.99:539,32,0	1/1:9,2:13:28.01:468,28,0	1/1:16,2:18:15.48:213,15,0	1/1:13,0:13:21.73:241,22,0	1/1:4,0:4:11.87:171,12,0	1/1:7,0:7:2.91:42,3,0	1/1:5,0:5:3.01:46,3,0	1/1:11,1:16:18.30:159,18,0	1/1:15,0:13:3:35,3,0	1/1:4,2:8:7.52:100,8,0	0/0:8,1:9:17.71:0,18,137	0/1:28,2:30:99:121,0,173	1/1:12,2:19:2.03:69,2,0	1/1:6,6:15:35.97:582,36,0	1/1:14,2:20:26.49:421,26,0	1/1:2,0:3:8.96:96,9,0
chr10	36072957	.	CG	C	748.45	PASS	AB=0.936;AC=38;AF=0.704;AN=54;BaseQRankSum=1.544;DP=377;FS=3.225;HRun=1;HaplotypeScore=180.3233;InbreedingCoeff=-0.0641;MQ=40.77;MQ0=8;MQRankSum=0.455;QD=2.19;ReadPosRankSum=3.977;VQSLOD=-0.2841;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:8,1:9:2.13:2,0,5	0/1:9,0:9:9.34:9,0,11	0/1:13,2:3:32.73:33,0,57	0/1:20,4:5:26.62:52,0,27	./.	1/1:15,0:15:0.33:9,0,0	1/1:17,0:17:5.78:17,6,0	0/1:19,0:17:1.26:5,0,1	1/1:4,3:7:0.54:39,1,0	1/1:13,1:13:14.31:70,14,0	0/0:13,1:13:4.36:0,4,17	1/1:18,4:21:20.05:144,20,0	1/1:16,0:16:12.40:51,12,0	1/1:13,0:13:1.43:30,1,0	0/1:17,1:18:9.10:16,0,9	1/1:4,7:11:8.42:101,8,0	1/1:0,4:4:10.16:55,10,0	1/1:7,0:7:2.12:7,2,0	1/1:3,1:4:2.80:13,3,0	0/1:13,2:15:10.11:13,0,10	0/0:12,2:13:2.04:0,2,6	0/1:7,0:7:3.47:3,0,4	1/1:8,1:9:8.09:23,8,0	0/1:30,1:31:13.88:29,0,14	0/1:19,0:19:8.72:42,0,9	0/1:13,0:13:8.63:34,0,9	1/1:20,0:20:21.85:79,22,0	0/1:3,1:3:1.57:7,0,2
chr10	36073028	.	TCAC	T	98.14	PASS	AB=0.932;AC=7;AF=0.125;AN=56;BaseQRankSum=3.021;DP=393;FS=46.349;HRun=0;HaplotypeScore=158.1120;InbreedingCoeff=-0.0232;MQ=37.95;MQ0=9;MQRankSum=-1.600;QD=1.15;ReadPosRankSum=-1.569;VQSLOD=1.2062;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:18:3.45:0,3,248	0/0:5,0:5:5.81:0,6,143	0/0:31,0:6:12.27:0,12,102	0/0:20,0:4:5.33:0,5,68	0/0:6,0:6:8.95:0,9,136	0/1:9,2:10:29.71:30,0,238	0/0:18,0:16:35.62:0,36,451	0/0:15,0:15:28.25:0,28,433	0/0:7,0:7:17.96:0,18,309	0/1:22,0:22:32.81:33,0,506	0/0:8,0:8:3.01:0,3,54	0/0:25,0:25:59.53:0,60,1089	0/0:15,1:16:21.15:0,21,424	0/1:17,2:18:57.11:57,0,536	0/0:17,0:16:27.05:0,27,562	0/0:13,0:13:21.34:0,21,303	0/0:7,0:6:8.96:0,9,93	1/1:4,1:5:3.01:40,3,0	0/0:13,0:11:29.91:0,30,352	0/1:18,0:18:22.81:23,0,241	0/0:13,0:11:1.88:0,2,16	0/0:17,0:17:20.72:0,21,279	0/0:11,0:10:3.37:0,3,52	0/0:13,0:13:6.02:0,6,138	0/0:15,0:13:10.36:0,10,306	0/1:9,1:9:39.44:39,0,104	0/0:14,1:14:23.70:0,24,425	0/0:3,0:2:5.94:0,6,41
chr10	36073050	.	CTTTTTCTTT	C	1612.22	PASS	AB=0.914;AC=26;AF=0.619;AN=42;BaseQRankSum=-3.936;DP=103;FS=1.442;HRun=0;HaplotypeScore=82.8981;InbreedingCoeff=-0.2732;MQ=29.34;MQ0=0;MQRankSum=1.983;QD=17.15;ReadPosRankSum=-5.026;VQSLOD=0.5416;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:2,0:2:3.01:0,3,41	1/1:1,0:1:3.01:35,3,0	0/0:3,0:1:2.80:0,3,13	./.	./.	1/1:4,0:4:9.43:105,9,0	0/1:2,0:3:12.01:76,0,12	1/1:2,0:2:5.85:53,6,0	0/1:4,0:4:18.15:102,0,18	./.	./.	0/1:19,1:21:30.29:473,0,30	0/1:3,1:4:26.90:28,0,27	0/1:5,2:7:44.19:44,0,59	0/1:8,1:9:39.06:248,0,39	1/1:1,0:1:3.01:35,3,0	1/1:1,0:1:2.96:19,3,0	./.	0/1:2,0:2:10.60:16,0,11	1/1:2,0:2:6.02:93,6,0	./.	1/1:5,0:5:11.77:113,12,0	1/1:4,1:6:5.03:81,5,0	0/1:11,0:11:22.54:92,0,23	0/1:4,0:4:23.33:49,0,23	0/0:2,1:3:0.47:0,0,1	0/1:7,0:7:74.93:77,0,75	./.
chr10	36073091	.	CTATCAT	C	924.96	PASS	AB=0.890;AC=26;AF=0.500;AN=52;BaseQRankSum=6.456;DP=259;FS=32.509;HRun=0;HaplotypeScore=111.1180;InbreedingCoeff=0.3399;MQ=29.88;MQ0=9;MQRankSum=-2.677;QD=7.97;ReadPosRankSum=0.840;VQSLOD=0.3844;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:7,0:6:8.89:91,9,0	1/1:5,0:5:5.69:55,6,0	0/0:25,0:2:3.48:0,3,52	0/0:16,0:2:5.42:0,5,23	1/1:11,0:12:3.81:16,4,0	0/0:10,0:10:1.70:0,2,63	0/0:5,0:3:2.80:0,3,13	0/0:4,0:1:3.01:0,3,43	1/1:5,0:4:5.60:28,6,0	0/1:15,0:16:42.36:110,0,42	1/1:5,1:6:3.90:55,4,0	0/0:25,0:25:63:0,63,1283	0/1:3,1:5:19.94:149,0,20	1/1:4,0:4:2.78:18,3,0	1/1:4,0:4:5.74:38,6,0	0/0:1,0:1:0.89:0,1,2	0/1:3,0:3:1.60:11,0,2	1/1:3,1:4:3.48:76,3,0	1/1:7,2:5:12.01:196,12,0	0/1:3,1:3:0:0,0,0	./.	0/1:13,0:12:0.33:0,0,30	0/0:11,0:11:15.65:0,16,256	0/0:30,1:31:27.16:0,27,799	0/0:10,0:10:14.06:0,14,72	0/1:12,1:13:37.17:162,0,37	./.	1/1:3,0:3:8.26:76,8,0
chr10	36073115	.	CCAT	C	594.61	PASS	AB=0.967;AC=26;AF=0.464;AN=56;BaseQRankSum=5.316;DP=419;FS=29.232;HRun=0;HaplotypeScore=146.6957;InbreedingCoeff=0.0072;MQ=30.88;MQ0=32;MQRankSum=-2.945;QD=2.22;ReadPosRankSum=0.988;VQSLOD=1.2444;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:15,0:12:5.01:29,0,5	1/1:8,0:8:13.59:56,14,0	0/1:15,0:2:0.83:1,0,20	0/0:15,0:2:2.50:0,2,10	0/1:19,1:19:2.09:7,0,2	1/1:14,0:13:6.66:28,7,0	1/1:8,1:7:5.76:37,6,0	0/1:17,2:15:94.25:94,0,173	0/1:9,0:8:6.53:7,0,18	0/1:30,2:28:99:126,0,106	0/1:14,0:13:2.57:40,0,3	0/0:31,0:30:76.73:0,77,1327	0/1:6,0:6:8.12:28,0,8	0/0:13,0:12:3.41:0,3,19	1/1:6,0:4:8.51:71,9,0	0/0:5,0:5:4.39:0,4,28	0/1:9,0:8:7.28:41,0,7	0/1:4,1:4:30.85:33,0,31	0/1:22,1:13:62.62:65,0,63	0/0:12,0:11:5.08:0,5,23	1/1:9,0:4:1.82:5,2,0	0/0:20,0:19:8.50:0,9,68	0/0:13,0:11:20.72:0,21,408	0/0:41,1:42:61.61:0,62,1340	0/1:15,1:15:1.81:2,0,94	0/1:28,0:25:58.92:59,0,202	1/1:7,0:5:1.36:3,1,0	0/1:4,0:3:4.02:19,0,4
chr10	36073168	.	A	ATCAT	6630.60	PASS	AB=0.789;AC=44;AF=0.786;AN=56;BaseQRankSum=1.209;DP=450;FS=22.183;HRun=0;HaplotypeScore=147.3595;InbreedingCoeff=0.5992;MQ=69.60;MQ0=2;MQRankSum=-5.126;QD=20.59;ReadPosRankSum=-3.479;VQSLOD=2.6875;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:1,1:32:8.96:148,9,0	1/1:2,0:5:0.34:126,0,0	0/1:15,0:15:30.54:31,0,191	0/0:29,0:25:38.35:0,38,396	0/0:3,8:13:0.22:0,0,1	1/1:2,0:12:3.83:20,4,0	1/1:5,0:23:44.97:593,45,0	1/1:11,0:22:59.26:681,59,0	1/1:0,13:14:18.06:499,18,0	1/1:5,0:18:32.16:532,32,0	1/1:4,0:10:19.07:188,19,0	0/0:28,0:28:52.37:0,52,906	1/1:3,0:16:11.25:368,11,0	1/1:2,1:15:8.97:118,9,0	1/1:0,0:4:6.02:76,6,0	1/1:0,10:10:21.07:585,21,0	1/1:2,15:19:17.99:408,18,0	1/1:3,0:11:30.02:344,30,0	1/1:5,0:17:42.11:470,42,0	1/1:4,0:12:23.66:264,24,0	1/1:6,0:19:27.77:272,28,0	1/1:1,0:4:8.94:120,9,0	0/0:11,0:10:17.91:0,18,289	0/0:47,0:47:99:0,99,1543	1/1:0,0:5:12:134,12,0	1/1:5,0:17:42:498,42,0	1/1:2,0:11:8.88:85,9,0	0/1:3,0:7:12.52:72,0,13
chr10	36073849	.	G	GTA	8667.76	PASS	AB=0.674;AC=33;AF=0.589;AN=56;BaseQRankSum=-6.926;DP=729;FS=6.961;HRun=0;HaplotypeScore=91.3252;InbreedingCoeff=0.0553;MQ=61.39;MQ0=33;MQRankSum=3.695;QD=15.53;ReadPosRankSum=2.122;VQSLOD=4.5471;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:9,0:40:24.10:71,0,24	0/1:2,12:13:3.88:318,0,4	0/0:51,0:15:31.21:0,31,254	0/0:49,0:13:27.16:0,27,246	0/1:2,1:19:9.90:123,0,10	1/1:3,17:20:7.54:277,8,0	1/1:4,2:29:9.15:349,9,0	1/1:3,30:36:66.32:732,66,0	0/1:4,2:24:16.85:294,0,17	0/1:6,18:23:8.96:574,0,9	1/1:4,16:19:27.56:493,28,0	0/0:17,0:17:48.05:0,48,599	0/1:17,0:16:66.51:67,0,107	0/1:23,5:29:9.46:486,0,9	1/1:3,24:27:10.39:601,10,0	1/1:0,2:14:24.07:321,24,0	1/1:4,2:31:21.04:270,21,0	0/1:18,12:29:11.99:732,0,12	1/1:6,9:15:4.70:244,5,0	0/1:19,7:25:9.10:634,0,9	0/1:11,38:46:31.95:367,0,32	0/1:11,0:11:58.02:67,0,58	0/0:21,0:21:41.96:0,42,448	0/0:33,0:33:90.02:0,90,1040	1/1:1,18:20:21.07:402,21,0	1/1:4,24:28:47.76:838,48,0	0/1:5,14:20:16.86:303,0,17	0/1:2,9:10:13.16:105,0,13
chr10	36074399	.	C	CCAAGAG	29911.82	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=4.512;DP=772;FS=1.361;HRun=0;HaplotypeScore=163.0654;InbreedingCoeff=0.9798;MQ=76.25;MQ0=0;MQRankSum=-13.320;QD=47.94;ReadPosRankSum=-1.536;VQSLOD=4.4931;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,31:47:88.18:2833,88,0	1/1:3,7:12:18.06:535,18,0	0/0:33,0:31:48.13:0,48,914	0/0:23,0:23:39.13:0,39,759	1/1:10,0:19:21:420,21,0	1/1:7,11:20:33.11:1101,33,0	1/1:6,15:28:42.14:1400,42,0	1/1:15,11:37:66.12:1448,66,0	1/1:9,0:36:63.22:1638,63,0	1/1:8,24:35:78.18:2232,78,0	1/1:4,5:10:18.06:593,18,0	0/0:31,0:31:84.25:0,84,1674	1/1:5,17:25:42.14:1396,42,0	1/1:7,20:33:60.21:1988,60,0	1/1:10,18:33:40.02:1302,40,0	1/1:7,0:34:39.13:1014,39,0	1/1:8,1:33:45.15:1146,45,0	1/1:7,14:23:33.11:1040,33,0	1/1:17,13:38:63.13:1610,63,0	1/1:9,14:24:39.13:1298,39,0	1/1:22,21:50:52.42:1516,52,0	1/1:5,12:18:33.11:1036,33,0	0/0:16,0:16:33.10:0,33,659	0/0:45,0:45:99:0,102,2107	1/1:0,6:8:18.06:600,18,0	1/1:7,18:29:66.21:1867,66,0	1/1:4,18:25:48.16:1600,48,0	1/1:2,4:7:9.03:300,9,0
chr10	36075018	.	G	GT	20970.82	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-9.199;DP=667;FS=2.226;HRun=1;HaplotypeScore=67.3581;InbreedingCoeff=0.9891;MQ=88.56;MQ0=0;MQRankSum=-6.809;QD=38.69;ReadPosRankSum=3.001;VQSLOD=5.6301;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,37:38:87.29:1303,87,0	1/1:0,13:13:39.09:559,39,0	0/0:20,0:20:53.61:0,54,620	0/0:32,0:32:74.63:0,75,890	1/1:1,21:22:54.13:763,54,0	1/1:1,17:18:42.10:586,42,0	1/1:0,18:18:45.15:674,45,0	1/1:1,33:34:99:1400,99,0	1/1:0,24:24:72.24:1068,72,0	1/1:2,25:27:78.24:1146,78,0	1/1:1,19:20:54.18:808,54,0	0/0:22,0:22:63.20:0,63,816	1/1:1,23:24:57.19:843,57,0	1/1:1,21:22:54.18:800,54,0	1/1:1,27:28:69.23:1033,69,0	1/1:0,15:15:36.12:539,36,0	1/1:0,31:31:87.29:1289,87,0	1/1:0,29:29:75.25:1119,75,0	1/1:1,21:22:63.18:918,63,0	1/1:0,26:26:75.21:1099,75,0	1/1:1,47:48:99:1753,117,0	1/1:1,17:18:36.12:539,36,0	0/0:20,0:20:54.18:0,54,700	0/0:31,0:31:93.30:0,93,1201	1/1:0,6:6:15.05:225,15,0	1/1:0,27:27:81.27:1213,81,0	1/1:0,28:27:75.25:1113,75,0	1/1:0,4:4:12.04:180,12,0
chr10	36076932	.	CAGAG	C	207.11	PASS	AB=0.964;AC=12;AF=0.261;AN=46;BaseQRankSum=2.943;DP=575;FS=1.301;HRun=0;HaplotypeScore=102.6245;InbreedingCoeff=0.5029;MQ=58.59;MQ0=10;MQRankSum=-1.490;QD=1.33;ReadPosRankSum=0.427;VQSLOD=1.2364;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:27:3:28,3,0	0/0:15,0:15:12.03:0,12,200	./.	./.	0/0:25,0:25:6.01:0,6,93	./.	1/1:23,0:25:5.97:49,6,0	0/0:33,0:33:9.48:0,9,98	0/0:16,0:15:3.01:0,3,39	0/0:19,0:19:22.93:0,23,260	0/0:16,0:16:6.01:0,6,67	1/1:16,1:20:9.02:102,9,0	0/0:9,0:10:11.77:0,12,164	0/0:14,0:14:9:0,9,143	0/1:23,0:26:19.36:19,0,323	0/0:20,0:18:6.02:0,6,93	0/0:19,0:20:22.32:0,22,365	0/0:24,0:26:11.47:0,11,114	./.	0/0:19,0:19:2.99:0,3,23	0/0:24,0:22:3.01:0,3,51	0/1:21,0:21:0:0,0,0	1/1:16,0:17:6:53,6,0	1/1:13,6:20:6.02:92,6,0	./.	0/0:19,0:19:8.99:0,9,83	0/0:14,0:13:18.04:0,18,236	0/0:12,0:11:6.49:0,6,82
chr10	36078264	.	TG	T	2851.74	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=10.221;DP=696;FS=1.740;HRun=8;HaplotypeScore=70.3088;InbreedingCoeff=0.9951;MQ=68.43;MQ0=0;MQRankSum=-0.640;QD=24.58;ReadPosRankSum=4.491;VQSLOD=4.3586;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:78.18:0,78,912	0/0:12,0:12:30.09:0,30,362	0/0:24,0:25:54.20:0,54,563	0/0:21,0:20:28.94:0,29,354	1/1:1,20:21:56.68:550,57,0	0/0:23,0:23:66.19:0,66,785	0/0:29,0:29:75.20:0,75,882	0/0:27,0:27:48.04:0,48,510	1/1:2,31:33:87.14:840,87,0	0/0:29,0:29:72.21:0,72,858	0/0:24,0:24:62.39:0,62,719	0/0:29,0:29:75.22:0,75,894	0/0:25,0:25:69.20:0,69,821	0/0:29,0:29:81.25:0,81,979	0/0:29,0:29:75.20:0,75,890	1/1:2,31:33:87.14:840,87,0	1/1:2,27:29:81.13:782,81,0	0/0:21,1:22:34.21:0,34,694	0/0:25,0:25:48.98:0,49,599	0/0:20,0:20:48.15:0,48,580	0/0:32,0:31:87.21:0,87,1002	0/0:17,0:17:39.12:0,39,471	0/0:26,0:26:54.17:0,54,652	0/0:45,0:45:99:0,120,1437	0/0:22,0:22:60.17:0,60,714	0/0:15,0:15:36.10:0,36,425	0/0:17,0:17:48.12:0,48,555	0/0:8,0:8:15.05:0,15,181
chr10	36079715	.	G	GC	2856.95	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-10.461;DP=588;FS=4.003;HRun=6;HaplotypeScore=60.3131;InbreedingCoeff=0.9839;MQ=69.90;MQ0=0;MQRankSum=-2.139;QD=32.47;ReadPosRankSum=1.303;VQSLOD=4.1020;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:90.13:0,90,893	0/0:6,0:6:18.04:0,18,184	0/0:22,0:19:20.85:0,21,345	0/0:15,0:14:15.98:0,16,183	1/1:0,21:21:63.20:791,63,0	0/0:18,0:18:45.10:0,45,459	0/0:27,0:27:69.15:0,69,704	0/0:19,0:19:50.32:0,50,490	1/1:0,12:12:33.11:415,33,0	0/0:15,0:15:42.10:0,42,429	0/0:17,0:17:51.06:0,51,509	0/0:25,0:25:69.15:0,69,703	0/0:13,0:13:39.09:0,39,398	0/0:27,0:27:78.18:0,78,795	0/0:18,0:19:45.10:0,45,459	1/1:0,15:15:36.12:453,36,0	1/1:2,38:40:99:1358,108,0	0/0:29,0:29:81.18:0,81,826	0/0:19,0:19:48.09:0,48,483	0/0:31,0:31:83.20:0,83,826	0/0:29,0:30:69.15:0,69,704	0/0:32,0:32:96.21:0,96,972	0/0:23,0:23:54.10:0,54,545	0/0:18,0:18:48.11:0,48,489	0/0:17,0:17:48.11:0,48,490	0/0:21,0:21:60.14:0,60,612	0/0:18,0:18:54.12:0,54,551	0/0:4,0:4:11.77:0,12,104
chr10	36080354	.	TTCTC	T	1346.68	PASS	AB=0.841;AC=18;AF=0.346;AN=52;BaseQRankSum=2.007;DP=595;FS=3.866;HRun=0;HaplotypeScore=114.5190;InbreedingCoeff=0.4951;MQ=65.97;MQ0=20;MQRankSum=1.547;QD=4.66;ReadPosRankSum=0.555;VQSLOD=2.2714;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:18,0:36:0:0,0,0	0/0:4,0:4:2.50:0,2,9	./.	0/0:41,0:21:0.47:0,0,1	1/1:16,0:16:9.03:128,9,0	0/0:11,0:11:15.05:0,15,258	0/1:33,0:33:39.55:40,0,128	./.	1/1:29,0:29:16.12:440,16,0	0/0:24,0:24:18.55:0,19,323	0/0:13,0:12:3.01:0,3,65	1/1:26,1:26:3.01:46,3,0	0/0:22,0:22:15.03:0,15,226	0/0:10,0:9:3.48:0,3,47	0/0:19,0:19:11.48:0,11,169	1/1:20,1:25:39.10:503,39,0	1/1:15,0:18:22.26:246,22,0	0/0:15,0:15:3.91:0,4,22	0/0:22,0:22:2.42:0,2,9	1/1:25,0:24:2.76:44,3,0	0/1:20,0:18:0:0,0,0	0/0:12,0:12:9.29:0,9,156	0/1:11,8:19:0.01:0,0,0	1/1:17,19:38:4.56:51,5,0	0/0:5,0:5:3.01:0,3,71	0/0:18,0:18:3.48:0,3,11	0/0:20,0:19:9.02:0,9,116	0/0:11,0:11:2.99:0,3,25
chr10	36080393	.	T	TCACACACACACACA	1324.31	PASS	AB=1.000;AC=15;AF=0.288;AN=52;BaseQRankSum=0.129;DP=462;FS=6.793;HRun=0;HaplotypeScore=149.7370;InbreedingCoeff=-0.1975;MQ=43.79;MQ0=47;MQRankSum=0.395;QD=5.99;ReadPosRankSum=-2.832;VQSLOD=1.6566;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:37:24.04:0,24,751	0/0:4,0:4:2.50:0,2,9	./.	./.	1/1:17,0:12:8.68:79,9,0	0/1:16,0:15:99:121,0,171	0/1:20,0:17:93.50:93,0,235	0/1:17,0:11:99:102,0,136	0/1:24,0:23:99:252,0,692	0/1:12,0:12:74.41:74,0,382	0/0:6,0:5:3.01:0,3,99	0/0:12,0:16:21.21:0,21,654	0/1:13,0:13:99:140,0,260	0/0:12,5:12:4.90:0,5,83	0/0:20,0:18:19.93:0,20,318	0/1:31,0:29:50.26:50,0,1387	0/0:23,0:20:2.35:0,2,429	0/1:9,0:9:99:159,0,135	0/0:6,0:5:4.88:0,5,57	1/1:23,0:19:2.76:44,3,0	0/0:18,0:10:3.48:0,3,42	0/0:10,0:10:9.29:0,9,187	0/0:19,0:19:21.72:0,22,705	0/0:40,0:38:40.63:0,41,1552	0/1:10,0:10:91.29:120,0,91	0/1:16,0:13:72.74:73,0,93	0/1:12,0:8:84.85:163,0,85	0/0:5,5:8:5.95:0,6,43
chr10	36080395	.	T	TCACACACACACACA	1671.48	PASS	AB=0.976;AC=20;AF=0.385;AN=52;BaseQRankSum=-0.285;DP=456;FS=12.672;HRun=0;HaplotypeScore=146.7166;InbreedingCoeff=-0.2291;MQ=44.07;MQ0=46;MQRankSum=2.065;QD=6.71;ReadPosRankSum=-4.353;VQSLOD=-0.4846;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:37:27.04:0,27,747	0/0:5,0:5:2.97:0,3,20	./.	./.	1/1:16,0:11:8.22:51,8,0	0/1:16,0:15:50.87:192,0,51	0/1:23,0:20:61.77:169,0,62	0/1:17,0:11:49.77:50,0,79	0/1:22,0:21:73.90:74,0,659	0/1:11,0:11:99:134,0,113	0/0:6,0:6:2.96:0,3,50	0/0:20,0:18:27.12:0,27,735	0/1:13,0:13:99:224,0,102	0/1:17,0:12:16.98:17,0,69	0/1:19,0:17:70.13:70,0,74	0/0:32,0:29:17.40:0,17,1445	0/0:22,0:19:20.34:0,20,471	0/1:9,0:9:86.87:222,0,87	0/1:8,0:6:22.09:37,0,22	1/1:22,0:19:8.96:69,9,0	0/0:16,0:8:0.47:0,0,1	0/1:11,0:11:22.94:23,0,61	0/0:19,0:19:24.74:0,25,769	0/0:39,0:37:40.43:0,40,1549	0/1:10,0:10:40.87:119,0,41	0/1:14,0:11:25:139,0,25	0/1:6,5:8:14.96:195,0,15	1/1:9,0:7:5.96:43,6,0
chr10	36080397	.	T	TCACACACACA	4240.40	PASS	AB=0.950;AC=31;AF=0.620;AN=50;BaseQRankSum=-0.394;DP=534;FS=10.419;HRun=0;HaplotypeScore=168.4889;InbreedingCoeff=0.5715;MQ=43.20;MQ0=49;MQRankSum=-3.813;QD=13.55;ReadPosRankSum=-3.618;VQSLOD=2.2834;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:38:29.64:0,30,473	1/1:6,0:6:5.99:111,6,0	./.	./.	0/1:18,0:13:0:0,0,0	1/1:18,0:17:9.01:214,9,0	1/1:33,0:29:20.69:314,21,0	1/1:26,0:19:21.54:550,22,0	0/0:22,0:21:22.80:0,23,420	1/1:17,0:17:29.51:905,30,0	1/1:8,0:8:2.98:22,3,0	0/0:21,0:19:27.05:0,27,559	0/1:14,0:14:1.95:262,0,2	0/1:17,0:12:34.69:35,0,62	1/1:22,0:19:1.55:4,2,0	0/0:33,0:30:50.83:0,51,973	0/0:24,0:21:12.05:0,12,340	0/1:8,0:8:53.88:118,0,54	1/1:19,0:15:27.54:619,28,0	0/1:18,8:24:0:0,0,0	1/1:22,0:13:8.33:51,8,0	1/1:12,0:12:3:25,3,0	0/0:20,0:20:24.66:0,25,634	0/0:40,0:38:41.97:0,42,1100	1/1:10,0:10:3.01:90,3,0	1/1:17,0:14:15.99:409,16,0	1/1:19,0:14:15.99:511,16,0	./.
chr10	36080417	.	ACACTCT	A	622.28	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=5.326;DP=619;FS=1.602;HRun=0;HaplotypeScore=150.0433;InbreedingCoeff=0.5662;MQ=47.51;MQ0=57;MQRankSum=-1.280;QD=6.76;ReadPosRankSum=2.509;VQSLOD=2.5278;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:42:56.93:0,57,1442	0/0:4,0:4:9.03:0,9,183	0/0:27,0:4:12.04:0,12,176	0/0:29,0:7:7.95:0,8,87	1/1:7,12:15:2.99:31,3,0	0/0:16,0:15:9.89:0,10,134	0/0:39,0:34:54.17:0,54,1177	0/0:42,0:33:92.75:0,93,1628	1/1:20,0:19:10.47:175,10,0	0/0:23,0:23:57.09:0,57,1116	0/0:11,0:11:15.05:0,15,280	0/0:24,0:22:34.54:0,35,1136	0/0:19,0:19:42.12:0,42,855	0/0:20,0:15:18.06:0,18,350	0/0:21,0:18:5.74:0,6,46	1/1:29,0:26:12.26:345,12,0	0/1:24,0:21:81.62:202,0,82	0/0:3,0:3:3.01:0,3,80	0/0:25,0:20:53.69:0,54,856	0/0:24,0:22:18.53:0,19,324	0/0:26,0:17:22.05:0,22,537	0/0:12,0:12:9.47:0,9,100	0/0:21,0:21:41.95:0,42,1148	0/0:36,0:34:53.86:0,54,1495	0/0:11,0:11:6.01:0,6,95	0/0:21,0:18:51.60:0,52,873	0/0:18,0:13:27:0,27,378	0/0:12,0:9:6.02:0,6,100
chr10	36080419	.	ACTCTCT	A	1026.22	PASS	AB=0.676;AC=9;AF=0.161;AN=56;BaseQRankSum=2.413;DP=631;FS=2.889;HRun=0;HaplotypeScore=149.6742;InbreedingCoeff=0.6172;MQ=47.58;MQ0=56;MQRankSum=-1.886;QD=9.08;ReadPosRankSum=3.221;VQSLOD=2.7339;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:41:57.06:0,57,1721	0/0:7,0:7:18.06:0,18,461	0/0:30,0:5:15.05:0,15,283	0/0:32,0:7:6.89:0,7,121	1/1:18,0:15:2.78:13,3,0	0/0:9,0:17:8.06:0,8,171	0/0:38,0:34:51.18:0,51,1438	0/0:40,0:32:81.28:0,81,2162	1/1:5,12:19:14.83:252,15,0	0/0:24,0:24:48.16:0,48,1388	0/0:11,0:11:15.05:0,15,381	0/0:24,0:22:42.14:0,42,1292	0/0:19,0:19:36.12:0,36,991	0/0:21,0:16:21.07:0,21,535	1/1:8,0:21:0.94:1,1,0	1/1:24,1:24:22.68:588,23,0	0/1:12,10:20:55.50:305,0,56	0/0:2,0:4:6.02:0,6,118	0/0:23,0:21:36.12:0,36,997	0/0:24,0:23:18.53:0,19,469	0/0:27,0:18:27.52:0,28,711	0/0:7,0:13:9.50:0,10,234	0/0:21,0:21:45.09:0,45,1370	0/0:32,0:30:57.17:0,57,1695	0/0:1,0:10:3.01:0,3,86	0/0:22,0:19:36.12:0,36,1102	0/0:18,0:13:21.07:0,21,442	0/0:13,0:10:9.03:0,9,221
chr10	36081740	.	GC	G	3034.18	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=10.490;DP=602;FS=3.135;HRun=3;HaplotypeScore=57.3890;InbreedingCoeff=0.9920;MQ=74.27;MQ0=0;MQRankSum=0.982;QD=29.75;ReadPosRankSum=3.937;VQSLOD=3.1462;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,114,1621	0/0:11,0:11:33.11:0,33,474	0/0:10,0:10:27.09:0,27,388	0/0:13,0:13:35.99:0,36,460	1/1:0,16:16:39.12:480,39,0	0/0:12,0:12:36.12:0,36,518	0/0:36,0:36:99:0,108,1512	0/0:12,0:12:33.10:0,33,459	1/1:1,25:26:60.19:744,60,0	0/0:16,0:16:42.14:0,42,591	0/0:10,0:10:18.06:0,18,259	0/0:41,0:41:99:0,111,1588	0/0:17,0:17:45.14:0,45,628	0/0:28,0:28:81.27:0,81,1164	0/0:12,0:12:33.11:0,33,475	1/1:0,18:18:51.16:632,51,0	1/1:3,39:42:99:1339,108,0	0/0:35,0:35:99:0,105,1506	0/0:23,0:23:69.21:0,69,944	0/0:9,0:9:27.08:0,27,371	0/0:72,1:73:99:0,176,2946	0/0:11,0:11:30.10:0,30,431	0/0:9,0:9:27.09:0,27,387	0/0:35,0:35:99:0,102,1467	0/0:12,0:12:36.12:0,36,517	0/0:15,0:15:45.15:0,45,643	0/0:15,0:15:45.15:0,45,648	0/0:5,0:5:15.05:0,15,214
chr10	36082637	.	T	TGTGTGTGTGCGTGTGTGTGTATGC	24916.25	PASS	AB=0.818;AC=41;AF=0.732;AN=56;BaseQRankSum=1.627;DP=764;FS=2.087;HRun=0;HaplotypeScore=399.0536;InbreedingCoeff=0.5696;MQ=49.19;MQ0=21;MQRankSum=-5.658;QD=39.99;ReadPosRankSum=0.417;VQSLOD=1.7866;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:40,0:39:22.46:955,0,22	0/1:3,6:16:5.49:329,0,5	0/0:28,0:13:26.94:0,27,353	0/0:29,0:16:33.05:0,33,466	0/1:19,0:19:1.78:478,0,2	1/1:21,0:21:14.96:231,15,0	1/1:37,0:36:58.27:1918,58,0	1/1:45,0:41:37.88:1498,38,0	1/1:39,0:38:3.35:1664,3,0	1/1:24,0:23:51.93:1648,52,0	1/1:29,0:29:17.93:720,18,0	0/0:22,0:22:55.03:0,55,1981	1/1:26,0:26:29.31:807,29,0	0/1:18,0:18:11.85:944,0,12	1/1:30,0:30:35.65:1598,36,0	1/1:17,0:18:27.03:720,27,0	1/1:26,0:25:45.51:1261,46,0	1/1:12,0:12:27.01:1256,27,0	1/1:27,0:25:44.03:842,44,0	1/1:29,0:29:29.60:891,30,0	1/1:39,0:39:31.91:634,32,0	1/1:6,11:25:9.03:816,9,0	0/0:20,0:18:30.05:0,30,807	0/0:42,0:40:93.62:0,94,2959	1/1:29,0:29:33.09:1920,33,0	1/1:29,0:29:66.15:2229,66,0	0/1:5,14:34:7.64:719,0,8	1/1:11,0:10:26.96:839,27,0
chr10	36082643	.	T	TGTGCGTGTGTGTGTATGC	19440.92	PASS	AB=1.000;AC=31;AF=0.554;AN=56;BaseQRankSum=2.724;DP=754;FS=6.468;HRun=0;HaplotypeScore=334.5472;InbreedingCoeff=-0.0687;MQ=44.79;MQ0=22;MQRankSum=-5.261;QD=32.03;ReadPosRankSum=5.275;VQSLOD=2.4921;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:5,23:54:6.73:1273,7,0	0/1:15,0:15:51.50:228,0,52	0/0:31,0:12:26.94:0,27,353	0/0:29,0:15:36.06:0,36,526	0/1:22,0:22:99:371,0,112	1/1:21,0:21:14.96:231,15,0	1/1:38,0:37:55.96:1475,56,0	0/1:39,0:35:99:1105,0,159	0/1:36,0:35:48.10:1368,0,48	0/1:22,0:21:3.60:1230,0,4	1/1:27,0:27:17.80:524,18,0	0/0:23,0:23:57.63:0,58,1806	0/1:25,0:25:87.20:601,0,87	0/1:20,0:20:99:782,0,106	0/1:29,0:29:52.28:1223,0,52	1/1:18,0:18:17.79:528,18,0	0/1:25,0:24:25.39:1085,0,25	1/1:10,0:10:28.33:898,28,0	0/1:25,0:23:61.59:654,0,62	0/1:27,0:27:63.85:447,0,64	0/1:35,0:35:58.75:591,0,59	0/1:24,0:24:92.74:620,0,93	0/0:21,0:19:33.09:0,33,814	0/0:43,0:41:99:0,99,2812	0/1:29,0:29:12.75:1347,0,13	1/1:26,0:26:41.75:1612,42,0	0/1:27,0:27:8.36:521,0,8	1/1:12,0:11:25.98:725,26,0
chr10	36085699	.	CATATACATATACATAT	C	441.52	PASS	AB=0.579;AC=5;AF=0.096;AN=52;BaseQRankSum=5.555;DP=629;FS=3.106;HRun=0;HaplotypeScore=270.7979;InbreedingCoeff=0.6097;MQ=48.44;MQ0=23;MQRankSum=-4.532;QD=8.03;ReadPosRankSum=-3.816;VQSLOD=2.0490;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:34:18.23:0,18,956	0/0:17,0:17:37.48:0,37,1409	./.	./.	0/0:5,10:15:2.33:0,2,14	0/0:24,0:23:35.82:0,36,1708	0/0:23,0:20:23.77:0,24,812	0/0:52,0:23:45.21:0,45,1037	0/1:6,14:22:9.68:134,0,10	0/0:38,0:36:71.85:0,72,4306	0/0:25,0:25:38.15:0,38,1936	0/0:13,0:12:36.11:0,36,691	0/0:22,0:21:43.67:0,44,1939	0/0:22,0:20:49.03:0,49,2730	0/0:24,0:23:45.14:0,45,2043	1/1:10,1:11:5.61:66,6,0	1/1:21,0:21:15.66:357,16,0	0/0:21,0:20:1.13:0,1,2299	0/0:21,0:12:21.89:0,22,625	0/0:35,0:30:54.61:0,55,2154	0/0:27,0:27:51.06:0,51,2128	0/0:13,0:13:16.82:0,17,462	0/0:19,0:19:48.16:0,48,1392	0/0:17,0:17:45.14:0,45,1477	0/0:32,0:29:56:0,56,2389	0/0:25,0:25:56.81:0,57,2899	0/0:22,0:22:57.87:0,58,2534	0/0:23,0:22:19.22:0,19,1194
chr10	36085711	.	CATAT	C	283.32	PASS	AB=0.926;AC=5;AF=0.096;AN=52;BaseQRankSum=4.925;DP=615;FS=11.589;HRun=0;HaplotypeScore=175.4324;InbreedingCoeff=0.2616;MQ=45.86;MQ0=21;MQRankSum=-2.083;QD=3.73;ReadPosRankSum=-1.118;VQSLOD=1.3008;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,4:28:21.26:0,21,283	0/0:18,0:18:26.18:0,26,450	./.	./.	0/0:17,0:17:2.70:0,3,15	0/0:24,0:23:17.71:0,18,617	0/0:25,0:21:20.97:0,21,317	0/0:52,0:23:42.15:0,42,810	0/1:20,0:20:9.68:32,0,10	0/0:39,0:37:63.88:0,64,1740	0/0:25,0:25:34.75:0,35,737	0/0:11,0:10:14.56:0,15,271	0/1:23,0:22:0.19:0,0,748	0/0:22,0:20:26.60:0,27,997	0/0:30,0:31:41.51:0,42,777	1/1:8,4:12:6.49:86,6,0	0/1:15,6:20:32.64:269,0,33	0/0:19,0:19:42.97:0,43,926	0/0:19,0:13:24.83:0,25,370	0/0:32,0:27:43.90:0,44,782	0/0:29,0:29:44.83:0,45,817	0/0:13,0:13:11:0,11,70	0/0:13,0:13:12.60:0,13,297	0/0:18,0:18:51.13:0,51,833	0/0:35,0:32:47.86:0,48,853	0/0:21,1:22:8.07:0,8,945	0/0:20,0:20:50.51:0,51,991	0/0:21,0:19:2.57:0,3,337
chr10	36085717	.	CATAT	C	3715.78	PASS	AB=0.956;AC=22;AF=0.423;AN=52;BaseQRankSum=2.954;DP=622;FS=1.333;HRun=0;HaplotypeScore=171.1746;InbreedingCoeff=-0.4368;MQ=45.98;MQ0=15;MQRankSum=1.730;QD=7.26;ReadPosRankSum=0.271;VQSLOD=2.9097;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:27:6.18:0,6,74	0/1:14,0:15:99:132,0,201	./.	./.	0/0:21,0:20:2.25:0,2,14	0/1:25,0:24:99:163,0,319	0/1:24,1:22:89.38:189,0,89	0/1:42,1:24:7.23:7,0,577	0/1:20,0:20:9.52:32,0,10	0/1:37,2:38:99:236,0,1056	0/1:25,0:25:99:137,0,390	0/0:10,0:9:13.27:0,13,285	0/1:23,1:23:99:223,0,410	0/1:21,0:20:99:249,0,465	0/1:18,13:30:56.85:57,0,383	1/1:15,0:15:6.49:87,6,0	0/1:25,0:24:2.04:295,0,2	0/1:22,0:21:99:164,0,451	0/0:17,0:14:9.51:0,10,203	0/1:28,1:24:97.38:97,0,317	0/1:32,1:33:99:355,0,371	1/1:14,2:16:19.61:308,20,0	0/0:15,0:15:6.33:0,6,193	0/0:18,0:18:51.14:0,51,775	0/1:35,1:34:99:322,0,414	0/1:19,2:21:99:195,0,624	0/1:20,0:20:40.27:40,0,466	0/1:24,0:22:99:428,0,170
chr10	36085719	.	T	TAC	3994.39	PASS	AB=0.852;AC=24;AF=0.462;AN=52;BaseQRankSum=1.871;DP=627;FS=0.861;HRun=0;HaplotypeScore=157.8573;InbreedingCoeff=-0.5641;MQ=45.96;MQ0=15;MQRankSum=1.140;QD=7.25;ReadPosRankSum=1.831;VQSLOD=3.3662;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:25:1.71:0,2,43	0/1:11,4:15:72.66:135,0,73	./.	./.	0/0:21,0:20:2.60:0,3,15	0/1:18,9:26:99:219,0,296	0/1:22,4:22:99:187,0,105	0/1:44,0:28:0.07:0,0,633	0/1:20,0:20:6.43:6,0,10	0/1:36,4:39:99:243,0,814	0/1:17,9:26:99:133,0,303	0/0:10,0:9:21.49:0,21,320	0/1:19,4:22:99:210,0,318	0/1:17,5:20:99:288,0,377	0/1:27,2:28:58.12:58,0,298	1/1:17,0:17:8.63:107,9,0	0/1:24,0:23:21.60:290,0,22	0/1:17,7:23:99:144,0,411	0/1:17,1:15:31.08:31,0,229	0/1:21,7:23:98.69:99,0,280	0/1:21,11:32:99:384,0,247	1/1:9,7:16:10.01:338,10,0	0/1:14,0:14:33.71:34,0,143	0/0:18,0:18:51.15:0,51,755	0/1:21,16:34:99:346,0,341	0/1:21,2:23:99:166,0,436	0/1:17,3:20:87.04:87,0,461	0/1:11,15:24:92.06:488,0,92
chr10	36086305	.	T	TA	9253.27	PASS	AB=0.685;AC=44;AF=0.786;AN=56;BaseQRankSum=-8.148;DP=501;FS=4.202;HRun=10;HaplotypeScore=53.3316;InbreedingCoeff=0.6045;MQ=75.95;MQ0=1;MQRankSum=-0.590;QD=21.08;ReadPosRankSum=1.049;VQSLOD=5.8872;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,25:28:66.17:703,66,0	1/1:0,6:6:12.92:130,13,0	0/1:24,0:18:1.29:1,0,72	0/0:21,0:19:3.93:0,4,125	1/1:4,21:25:32.38:514,32,0	1/1:4,16:20:33.84:495,34,0	1/1:4,20:25:38.35:597,38,0	1/1:8,18:26:56.34:575,56,0	1/1:4,11:15:30.08:320,30,0	1/1:6,19:25:57.12:593,57,0	1/1:4,15:19:23.48:455,23,0	0/0:13,0:13:32.96:0,33,271	1/1:2,14:17:35.92:366,36,0	0/1:2,8:10:22.26:185,0,22	1/1:1,10:12:32.95:334,33,0	0/1:3,10:13:13.20:284,0,13	1/1:2,22:24:51.13:544,51,0	1/1:4,12:17:11.28:310,11,0	1/1:9,12:25:44.60:438,45,0	0/1:5,8:13:0.58:200,0,1	1/1:0,3:3:6.02:64,6,0	1/1:2,11:13:33.08:352,33,0	0/0:8,0:8:17.97:0,18,147	0/0:18,0:18:35.90:0,36,295	1/1:2,16:20:44.78:444,45,0	1/1:7,16:23:45.11:480,45,0	1/1:3,19:22:47.74:511,48,0	1/1:2,12:14:14.45:359,14,0
chr10	36090437	.	AGTGTATGTGTGTGTGTGTGTGTGTGTGTGTGTGT	A	6041.30	PASS	AB=0.990;AC=40;AF=0.714;AN=56;BaseQRankSum=-0.130;DP=386;FS=14.349;HRun=0;HaplotypeScore=273.9915;InbreedingCoeff=0.4376;MQ=65.04;MQ0=11;MQRankSum=-0.882;QD=23.33;ReadPosRankSum=-3.723;VQSLOD=1.1536;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:22:29.88:234,30,0	1/1:3,0:3:3.01:72,3,0	0/0:36,0:15:29.96:0,30,750	0/0:30,0:19:38.52:0,39,872	0/1:17,0:17:99:110,0,1139	1/1:2,12:14:6.02:530,6,0	1/1:11,0:11:23.91:253,24,0	1/1:10,0:10:26.96:303,27,0	0/0:9,0:9:2.09:0,2,1706	0/1:17,0:17:99:333,0,232	1/1:1,14:15:8.99:323,9,0	0/0:10,0:10:26.96:0,27,1851	1/1:9,0:9:11.91:89,12,0	1/1:0,7:7:3.01:265,3,0	1/1:3,0:3:5.98:46,6,0	0/1:3,0:3:15.93:16,0,525	0/1:22,0:22:82.48:82,0,2658	1/1:9,0:9:7.39:180,7,0	1/1:3,14:17:44.95:1169,45,0	1/1:1,9:10:6.02:304,6,0	1/1:13,0:11:17.94:141,18,0	1/1:0,12:12:6.01:290,6,0	0/0:19,0:19:50.48:0,50,4154	0/0:23,0:23:37.16:0,37,6143	1/1:0,6:6:3.01:264,3,0	1/1:0,19:19:50.65:683,51,0	1/1:9,0:9:11.91:90,12,0	1/1:0,9:9:3.01:265,3,0
chr10	36090829	.	TA	T	8345.36	PASS	AB=1.000;AC=43;AF=0.768;AN=56;BaseQRankSum=5.637;DP=350;FS=0.510;HRun=4;HaplotypeScore=54.8737;InbreedingCoeff=0.8652;MQ=75.25;MQ0=0;MQRankSum=-1.532;QD=30.13;ReadPosRankSum=3.574;VQSLOD=4.9224;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:83.93:0,84,1136	1/1:0,7:7:18.06:250,18,0	0/0:14,0:11:23.86:0,24,249	0/0:10,0:8:20.74:0,21,235	1/1:18,0:18:31.31:102,31,0	1/1:0,21:21:51.17:709,51,0	1/1:0,9:9:18.06:251,18,0	1/1:0,24:24:72.24:1000,72,0	0/1:15,0:15:0.19:30,0,0	1/1:0,19:19:54.10:684,54,0	1/1:0,12:12:30.05:394,30,0	0/0:9,0:9:27.02:0,27,294	1/1:0,8:8:21.07:293,21,0	1/1:0,8:8:24.08:334,24,0	1/1:0,15:15:42.14:586,42,0	1/1:8,0:8:3.20:27,3,0	1/1:9,0:9:15.52:42,16,0	1/1:0,9:9:24.08:334,24,0	1/1:0,18:18:53.99:581,54,0	1/1:0,13:13:33.11:458,33,0	1/1:0,10:10:30.10:418,30,0	1/1:0,1:1:3.01:42,3,0	0/0:5,0:5:15.05:0,15,213	0/0:6,0:6:18:0,18,215	1/1:0,16:16:36.12:499,36,0	1/1:0,15:15:45.08:560,45,0	1/1:0,17:17:42.14:585,42,0	1/1:0,5:5:12.04:167,12,0
chr10	36090830	.	AT	A	4049.89	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=6.592;DP=352;FS=0.574;HRun=8;HaplotypeScore=70.0304;InbreedingCoeff=0.9239;MQ=75.09;MQ0=0;MQRankSum=-0.590;QD=14.57;ReadPosRankSum=2.084;VQSLOD=3.6638;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:78.18:0,78,914	1/1:7,0:7:17.45:102,17,0	0/0:14,0:11:11.29:0,11,90	0/0:11,0:8:14.26:0,14,148	1/1:0,17:17:48.07:459,48,0	1/1:21,0:21:49.17:266,49,0	1/1:9,0:9:17.18:87,17,0	1/1:25,0:25:68.44:350,68,0	1/1:1,14:15:39.06:377,39,0	1/1:20,0:20:19.91:227,20,0	1/1:12,0:12:25.93:142,26,0	0/0:9,0:9:12.02:0,12,133	1/1:8,0:8:20.05:102,20,0	1/1:8,0:8:22.93:117,23,0	1/1:15,0:15:39.98:200,40,0	1/1:1,7:8:15.02:145,15,0	1/1:0,9:9:27.04:261,27,0	1/1:9,0:9:23.04:120,23,0	1/1:18,0:18:25.36:124,25,0	1/1:13,0:13:31.86:177,32,0	1/1:10,0:10:28.80:150,29,0	1/1:1,0:1:2.88:15,3,0	0/0:5,0:5:15.05:0,15,181	0/0:6,0:6:15.05:0,15,180	1/1:16,0:16:34.70:197,35,0	1/1:15,0:15:33.69:160,34,0	1/1:17,0:17:40.39:214,40,0	1/1:5,0:5:11.50:59,12,0
chr10	36093855	.	G	GTA	10304.65	PASS	AB=0.959;AC=45;AF=0.804;AN=56;BaseQRankSum=-6.939;DP=407;FS=2.931;HRun=0;HaplotypeScore=57.0977;InbreedingCoeff=0.6467;MQ=87.19;MQ0=5;MQRankSum=-1.052;QD=30.31;ReadPosRankSum=1.707;VQSLOD=6.3199;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:72.19:0,72,892	1/1:3,5:8:9.03:152,9,0	0/0:26,0:15:0.31:0,0,41	0/1:45,0:25:35.13:35,0,57	1/1:8,10:18:27.08:432,27,0	1/1:3,24:27:63.22:1061,63,0	1/1:0,4:4:6.02:101,6,0	1/1:5,37:43:99:1826,114,0	1/1:4,7:11:18.06:302,18,0	1/1:0,15:15:45.14:704,45,0	1/1:3,7:10:18.06:286,18,0	0/0:10,0:10:30.08:0,30,369	1/1:1,7:8:9.03:152,9,0	1/1:1,6:7:18.06:303,18,0	1/1:1,14:15:39.13:657,39,0	1/1:0,4:4:9.03:151,9,0	1/1:8,7:15:27.05:399,27,0	1/1:0,2:2:6.02:101,6,0	1/1:3,12:14:33.56:520,34,0	1/1:1,8:9:18.06:303,18,0	1/1:2,3:5:6.02:101,6,0	1/1:2,2:3:3.01:51,3,0	0/0:2,0:2:6.02:0,6,77	0/0:2,0:2:6:0,6,62	1/1:2,19:21:57.20:961,57,0	1/1:5,15:20:45.11:697,45,0	1/1:2,12:14:30.10:505,30,0	1/1:6,12:18:30.10:506,30,0
chr10	36093870	.	C	CAT	1261.20	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=1.511;DP=405;FS=0.000;HRun=0;HaplotypeScore=88.5335;InbreedingCoeff=0.8114;MQ=89.02;MQ0=4;MQRankSum=-6.103;QD=31.53;ReadPosRankSum=-0.801;VQSLOD=4.9923;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:72.16:0,72,879	0/0:6,0:6:15.05:0,15,193	0/0:25,0:16:10.42:0,10,74	0/0:47,0:26:11.14:0,11,131	1/1:6,9:15:27.09:419,27,0	0/0:29,0:29:66.21:0,66,848	0/0:4,0:4:6.02:0,6,77	0/0:45,0:45:99:0,99,1262	1/1:1,9:11:27.09:441,27,0	0/0:15,0:15:42.14:0,42,540	0/0:9,0:9:21.07:0,21,270	0/0:9,0:9:24.08:0,24,309	0/0:9,0:9:9.01:0,9,101	0/0:7,0:7:21.07:0,21,270	0/0:15,0:15:30.10:0,30,386	1/1:1,2:3:9.03:152,9,0	1/1:3,8:11:24.08:403,24,0	0/0:4,0:4:12:0,12,136	0/0:20,0:19:47.93:0,48,605	0/0:14,0:14:39.11:0,39,488	0/0:4,0:4:9.03:0,9,116	0/0:1,0:1:3.01:0,3,39	0/0:4,0:4:9.03:0,9,116	0/0:2,0:2:6.02:0,6,77	0/0:17,0:17:36.12:0,36,463	0/0:15,0:15:33.10:0,33,412	0/0:17,0:17:36.12:0,36,463	0/0:14,0:14:36.12:0,36,463
chr10	36094190	.	G	GT	12594.31	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-7.398;DP=525;FS=8.233;HRun=7;HaplotypeScore=53.9978;InbreedingCoeff=0.9435;MQ=79.04;MQ0=0;MQRankSum=-5.591;QD=28.62;ReadPosRankSum=1.167;VQSLOD=5.3740;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,20:23:57.17:689,57,0	1/1:3,14:18:36.11:435,36,0	0/0:22,0:22:51.57:0,52,423	0/0:14,0:13:8.41:0,8,187	1/1:4,24:28:69.09:783,69,0	1/1:4,25:29:63.19:761,63,0	1/1:2,12:14:29.96:341,30,0	1/1:2,17:20:54.47:606,54,0	1/1:3,19:22:54.17:652,54,0	1/1:2,15:17:45.10:519,45,0	1/1:4,10:15:32.88:344,33,0	0/0:13,0:13:33.03:0,33,311	1/1:1,16:17:45.14:544,45,0	1/1:1,13:14:36.11:435,36,0	1/1:4,22:26:57.17:689,57,0	1/1:1,22:23:51.14:616,51,0	1/1:2,15:17:27.08:326,27,0	1/1:0,1:1:3.01:36,3,0	1/1:2,20:22:60.14:697,60,0	1/1:0,17:17:48.11:564,48,0	1/1:4,12:16:33.10:399,33,0	1/1:1,19:20:54.12:636,54,0	0/0:15,0:15:42.07:0,42,405	0/0:20,0:20:60.05:0,60,570	1/1:0,8:8:21.06:254,21,0	1/1:4,17:21:51.10:587,51,0	1/1:1,33:35:96.16:1138,96,0	1/1:1,16:17:45.14:544,45,0
chr10	36094360	.	GT	G	8872.45	PASS	AB=0.929;AC=45;AF=0.804;AN=56;BaseQRankSum=6.246;DP=521;FS=2.702;HRun=10;HaplotypeScore=73.9014;InbreedingCoeff=0.8548;MQ=73.93;MQ0=2;MQRankSum=-3.233;QD=20.59;ReadPosRankSum=2.134;VQSLOD=5.9297;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:35:62.75:0,63,324	1/1:1,1:2:2.99:26,3,0	0/1:12,1:12:2:2,0,192	0/0:8,0:8:13.78:0,14,113	1/1:1,12:13:35.99:313,36,0	1/1:2,24:26:62.98:547,63,0	1/1:2,7:9:20.99:182,21,0	1/1:0,24:24:71.95:616,72,0	1/1:3,19:23:22.84:416,23,0	1/1:0,24:24:68.94:593,69,0	1/1:2,24:26:68.97:599,69,0	0/0:16,0:16:45.12:0,45,498	1/1:2,11:13:32.99:287,33,0	1/1:2,14:16:11.81:331,12,0	1/1:3,13:16:35.99:313,36,0	1/1:1,19:20:50.98:443,51,0	1/1:2,21:23:53.99:469,54,0	1/1:4,12:16:32.98:286,33,0	1/1:5,12:17:32.94:281,33,0	1/1:6,25:31:77.89:667,78,0	1/1:1,9:10:3.49:185,3,0	1/1:2,16:18:44.98:391,45,0	0/0:19,0:19:54.13:0,54,582	0/0:11,0:11:30.08:0,30,332	1/1:2,11:13:29.99:260,30,0	1/1:2,21:23:62.99:547,63,0	1/1:4,27:31:74.97:651,75,0	1/1:2,22:24:53.98:469,54,0
chr10	36094498	.	G	GAA	7224.31	PASS	AB=0.604;AC=43;AF=0.768;AN=56;BaseQRankSum=-1.041;DP=491;FS=8.652;HRun=13;HaplotypeScore=74.4791;InbreedingCoeff=0.6816;MQ=62.79;MQ0=10;MQRankSum=-1.512;QD=17.16;ReadPosRankSum=-2.288;VQSLOD=2.9846;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,4:35:54.95:564,55,0	1/1:5,5:12:12.03:151,12,0	0/0:14,0:8:11.94:0,12,98	0/0:12,0:4:5.74:0,6,39	1/1:11,8:23:32.32:285,32,0	1/1:7,9:21:23.04:242,23,0	1/1:5,11:17:30.15:362,30,0	1/1:7,11:19:6.06:278,6,0	1/1:1,11:12:24.08:322,24,0	1/1:7,11:19:44.60:539,45,0	1/1:10,7:19:20.13:164,20,0	0/0:11,0:13:17.23:0,17,183	0/1:7,9:17:5.32:175,0,5	1/1:3,9:13:21.07:278,21,0	1/1:5,15:20:0.49:300,0,0	0/1:2,10:12:1.11:256,0,1	1/1:3,11:16:38.10:466,38,0	1/1:6,7:15:24.05:295,24,0	1/1:10,9:19:29.95:338,30,0	1/1:16,7:26:47.60:464,48,0	1/1:5,10:16:21.05:269,21,0	0/1:9,10:20:2.89:214,0,3	0/0:15,0:15:17.78:0,18,158	0/0:16,0:16:35.90:0,36,317	1/1:4,5:11:19.99:200,20,0	1/1:11,10:24:33.36:343,33,0	1/1:4,14:20:32.54:395,33,0	1/1:2,9:12:24.08:325,24,0
chr10	36094915	.	GTCTCTCTC	G	7718.06	PASS	AB=0.875;AC=34;AF=0.630;AN=54;BaseQRankSum=0.307;DP=533;FS=0.568;HRun=0;HaplotypeScore=171.8367;InbreedingCoeff=0.8302;MQ=69.44;MQ0=8;MQRankSum=-6.654;QD=23.68;ReadPosRankSum=0.553;VQSLOD=4.0013;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:21:9.03:0,9,333	1/1:5,7:13:14.33:358,14,0	0/0:36,0:23:9.03:0,9,185	0/1:36,0:16:2.40:2,0,35	0/0:18,0:33:29.80:0,30,1019	1/1:4,7:14:21.07:471,21,0	1/1:8,5:13:20.96:391,21,0	1/1:20,4:25:14.67:249,15,0	0/0:12,0:19:14.35:0,14,521	1/1:13,9:22:18.05:419,18,0	1/1:8,10:20:30.10:715,30,0	0/0:4,0:12:21.07:0,21,671	1/1:12,6:17:18.06:435,18,0	1/1:5,8:16:24.08:532,24,0	1/1:9,9:19:30.10:739,30,0	0/0:9,0:24:32.84:0,33,1058	0/0:15,0:19:15.05:0,15,467	0/1:4,2:6:1.68:71,0,2	1/1:10,3:14:8.92:167,9,0	1/1:9,6:16:15.05:333,15,0	./.	1/1:9,9:20:30.10:655,30,0	0/0:9,0:17:18.06:0,18,651	0/0:8,0:15:30.10:0,30,1002	1/1:8,6:17:4.12:499,4,0	1/1:13,9:23:27.08:645,27,0	1/1:11,10:24:33.11:752,33,0	1/1:2,4:9:12.04:284,12,0
chr10	36095256	.	TA	T	10522.93	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=7.802;DP=560;FS=0.000;HRun=9;HaplotypeScore=102.5092;InbreedingCoeff=0.8575;MQ=67.99;MQ0=2;MQRankSum=-3.774;QD=22.98;ReadPosRankSum=3.786;VQSLOD=4.7936;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,33:35:99:906,99,0	1/1:0,5:5:15.01:137,15,0	0/0:30,1:17:1.74:0,2,138	0/0:19,0:11:4.67:0,5,34	1/1:4,20:24:60.03:549,60,0	1/1:2,19:21:54.03:494,54,0	1/1:1,8:9:18.01:165,18,0	1/1:7,25:32:75:680,75,0	1/1:3,16:19:48.02:439,48,0	1/1:4,25:29:75.04:685,75,0	1/1:2,13:15:36.02:329,36,0	0/0:21,0:21:60.18:0,60,692	1/1:1,15:16:33.01:302,33,0	1/1:1,14:16:38.94:337,39,0	1/1:0,15:15:33.02:302,33,0	1/1:1,22:23:63.03:577,63,0	1/1:4,23:27:63.02:576,63,0	1/1:1,10:11:27.01:247,27,0	1/1:5,18:23:54.02:494,54,0	1/1:2,21:23:60.02:548,60,0	1/1:1,6:7:20.93:182,21,0	1/1:2,8:10:18:165,18,0	0/0:9,1:10:2.61:0,3,274	0/0:20,0:20:60.17:0,60,682	1/1:1,23:24:57.03:521,57,0	1/1:2,25:27:44.40:653,44,0	1/1:1,23:24:65.32:603,65,0	1/1:0,23:23:69.04:632,69,0
chr10	36097059	.	T	TTGGTCAGAGGAAGAGCCACT	2287.16	PASS	AB=0.713;AC=36;AF=0.947;AN=38;BaseQRankSum=-1.570;DP=49;FS=6.140;HRun=0;HaplotypeScore=30.2054;InbreedingCoeff=-0.1833;MQ=115.66;MQ0=0;MQRankSum=-2.274;QD=53.19;ReadPosRankSum=-1.678;VQSLOD=1.1629;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:4:8.90:60,9,0	./.	0/1:2,1:5:17.26:705,0,17	0/1:3,0:4:7.63:215,0,8	./.	1/1:2,0:2:5.98:70,6,0	1/1:2,0:2:5.94:41,6,0	1/1:2,0:2:3.01:55,3,0	1/1:1,0:1:2.97:20,3,0	1/1:2,0:1:6.02:215,6,0	./.	1/1:2,0:2:6.01:107,6,0	1/1:2,0:2:6.01:98,6,0	1/1:1,0:1:3.01:104,3,0	1/1:3,0:3:5.93:40,6,0	1/1:1,0:1:3:26,3,0	./.	1/1:2,0:2:5.99:115,6,0	1/1:1,0:1:3.01:76,3,0	./.	./.	1/1:2,0:2:6.02:237,6,0	./.	1/1:2,0:2:3.01:50,3,0	./.	1/1:3,0:3:6:103,6,0	1/1:2,0:2:5.93:40,6,0	./.
chr10	36098396	.	A	AG	17455.90	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=2.566;DP=582;FS=20.763;HRun=4;HaplotypeScore=111.3630;InbreedingCoeff=0.9920;MQ=93.31;MQ0=0;MQRankSum=-6.347;QD=36.44;ReadPosRankSum=2.931;VQSLOD=2.9108;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,40:44:99:1416,99,0	1/1:0,7:7:11.84:164,12,0	0/0:23,0:23:59.31:0,59,666	0/0:29,0:29:84.10:0,84,986	1/1:2,17:19:39.02:559,39,0	1/1:0,12:12:36.12:517,36,0	1/1:0,21:21:54.18:769,54,0	1/1:3,29:32:87.28:1227,87,0	1/1:0,24:24:60.20:864,60,0	1/1:2,22:25:66.21:921,66,0	1/1:1,12:13:36.12:507,36,0	0/0:17,0:17:48.08:0,48,574	1/1:2,25:27:63.21:898,63,0	1/1:0,15:15:36.12:518,36,0	1/1:1,24:25:75.24:1055,75,0	1/1:0,13:13:30.10:432,30,0	1/1:1,23:24:60.20:853,60,0	1/1:1,15:16:36.12:518,36,0	1/1:3,19:22:63.12:859,63,0	1/1:0,16:17:45.15:645,45,0	1/1:3,30:33:96.28:1327,96,0	1/1:1,19:20:54.18:758,54,0	0/0:10,0:10:30.09:0,30,372	0/0:24,0:24:69.22:0,69,854	1/1:0,13:13:33.11:475,33,0	1/1:1,16:17:45.15:645,45,0	1/1:4,25:29:78.22:1097,78,0	1/1:1,10:11:30.10:432,30,0
chr10	36098717	.	CGTGT	C	3436.01	PASS	AB=0.821;AC=35;AF=0.673;AN=52;BaseQRankSum=0.874;DP=365;FS=3.199;HRun=0;HaplotypeScore=67.7062;InbreedingCoeff=0.5164;MQ=69.13;MQ0=5;MQRankSum=-1.081;QD=15.00;ReadPosRankSum=0.569;VQSLOD=3.1570;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:21:20.42:0,20,360	1/1:0,2:2:6.02:95,6,0	./.	./.	0/0:8,0:13:8.73:0,9,159	1/1:6,6:12:12.04:190,12,0	1/1:3,6:9:5.85:95,6,0	0/1:20,5:25:17.55:149,0,18	0/0:2,0:6:6.02:0,6,104	1/1:6,8:14:17.87:339,18,0	1/1:4,3:9:12.03:151,12,0	0/1:10,1:11:23.49:23,0,458	1/1:3,2:5:6.02:95,6,0	1/1:2,1:5:11.94:120,12,0	1/1:5,4:9:6.02:95,6,0	0/0:9,0:12:15.05:0,15,272	0/0:18,0:35:47.89:0,48,853	1/1:7,10:17:24.08:372,24,0	1/1:19,5:23:14.71:175,15,0	1/1:2,3:6:6.02:95,6,0	1/1:13,3:16:0.99:88,1,0	1/1:4,2:6:3.01:48,3,0	0/0:4,0:4:3.01:0,3,72	0/0:10,0:11:26.83:0,27,495	1/1:0,7:7:15.05:238,15,0	0/1:11,3:20:49.41:202,0,49	1/1:7,5:13:15.04:218,15,0	1/1:4,14:19:42.13:647,42,0
chr10	36099385	.	C	CTT	10446.22	PASS	AB=0.564;AC=45;AF=0.804;AN=56;BaseQRankSum=-4.305;DP=520;FS=0.000;HRun=12;HaplotypeScore=79.3014;InbreedingCoeff=0.8386;MQ=69.02;MQ0=2;MQRankSum=-0.991;QD=23.32;ReadPosRankSum=-2.965;VQSLOD=3.8588;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:5,0:22:24.10:56,0,24	1/1:2,5:9:23:247,23,0	0/0:21,0:20:27.38:0,27,208	0/0:9,0:8:5.53:0,6,37	1/1:9,7:17:35.56:410,36,0	1/1:12,8:22:21.95:527,22,0	1/1:7,10:20:14.97:311,15,0	1/1:9,23:36:74.18:933,74,0	1/1:7,7:14:33.09:438,33,0	1/1:12,10:25:53.09:602,53,0	1/1:11,6:19:35.57:422,36,0	0/0:18,0:20:44.40:0,44,384	1/1:2,17:20:8.34:421,8,0	1/1:8,7:15:40.51:431,41,0	1/1:6,9:17:43.59:512,44,0	1/1:7,8:18:46.09:511,46,0	1/1:19,6:26:51.08:613,51,0	1/1:10,4:14:32.43:315,32,0	1/1:9,6:16:32.57:393,33,0	1/1:8,11:20:44.58:529,45,0	1/1:5,9:14:21.07:289,21,0	1/1:8,7:15:32.56:389,33,0	0/0:10,0:10:20.69:0,21,178	0/0:9,0:9:20.98:0,21,194	1/1:12,7:21:47.58:554,48,0	1/1:14,15:31:65.07:759,65,0	1/1:13,6:18:39.08:489,39,0	1/1:2,12:14:21.07:294,21,0
chr10	36099460	.	CT	C	6249.86	PASS	AB=0.736;AC=41;AF=0.732;AN=56;BaseQRankSum=3.371;DP=543;FS=4.424;HRun=12;HaplotypeScore=71.9397;InbreedingCoeff=0.5175;MQ=71.89;MQ0=3;MQRankSum=-0.237;QD=13.62;ReadPosRankSum=5.103;VQSLOD=5.3311;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:42.08:0,42,426	0/1:4,12:16:22.05:217,0,22	0/0:26,0:17:24.54:0,25,194	0/1:26,0:17:8.42:8,0,26	1/1:7,20:29:60.78:451,61,0	1/1:3,15:18:41.83:325,42,0	1/1:5,11:17:28.90:215,29,0	1/1:14,14:27:14.27:284,14,0	1/1:3,14:18:43.87:331,44,0	1/1:7,20:29:61.76:470,62,0	1/1:3,16:20:49.82:377,50,0	0/0:13,0:13:33.04:0,33,325	1/1:5,8:14:28.93:214,29,0	1/1:4,9:15:6.15:173,6,0	1/1:4,13:18:40.85:308,41,0	1/1:6,8:14:11.82:171,12,0	1/1:8,17:26:10.37:250,10,0	1/1:4,13:18:40.88:308,41,0	1/1:8,15:23:14.40:294,14,0	1/1:4,16:21:48.86:360,49,0	0/1:3,2:5:45.93:54,0,46	0/1:9,11:20:21.90:216,0,22	0/0:18,1:19:21.82:0,22,380	0/0:6,0:7:20.88:0,21,197	1/1:5,17:22:7.13:305,7,0	1/1:6,21:29:36.36:446,36,0	1/1:1,19:24:58.94:418,59,0	0/1:6,3:9:18.49:58,0,18
chr10	36100580	.	G	GA	5467.64	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-14.211;DP=670;FS=0.774;HRun=2;HaplotypeScore=61.7138;InbreedingCoeff=0.9972;MQ=83.06;MQ0=1;MQRankSum=-0.392;QD=43.74;ReadPosRankSum=4.238;VQSLOD=4.0717;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,126,1743	0/0:9,0:9:27.09:0,27,378	0/0:36,0:34:99:0,102,1283	0/0:22,0:23:66.21:0,66,891	1/1:1,23:24:69.24:1103,69,0	0/0:24,0:24:72.23:0,72,989	0/0:29,0:29:84.26:0,84,1157	0/0:25,0:25:75.23:0,75,1018	1/1:0,26:26:72.25:1151,72,0	0/0:24,0:24:72.24:0,72,1006	0/0:21,0:21:60.20:0,60,837	0/0:19,0:19:57.19:0,57,797	0/0:20,0:20:60.20:0,60,838	0/0:26,0:26:75.23:0,75,1028	0/0:27,0:27:81.25:0,81,1113	1/1:0,27:27:75.26:1199,75,0	1/1:1,47:48:99:2014,126,0	0/0:18,0:17:51.13:0,51,688	0/0:19,0:18:51.17:0,51,712	0/0:20,0:20:60.20:0,60,839	0/0:30,0:30:87.29:0,87,1214	0/0:21,0:21:63.20:0,63,864	0/0:18,0:18:54.18:0,54,754	0/0:31,0:31:90.30:0,90,1258	0/0:9,0:9:27.09:0,27,375	0/0:23,0:23:69.19:0,69,915	0/0:21,0:20:57.19:0,57,796	0/0:6,0:6:18.06:0,18,252
chr10	36100810	.	ATGTTAAAACCCCCTCCCTAGT	A	2165.60	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.874;DP=510;FS=4.101;HRun=0;HaplotypeScore=266.8338;InbreedingCoeff=0.9888;MQ=89.29;MQ0=0;MQRankSum=-6.059;QD=86.62;ReadPosRankSum=0.923;VQSLOD=3.1195;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:3,22:25:39.13:2260,39,0	0/0:11,0:11:33.09:0,33,2723	0/0:24,0:24:72.25:0,72,3812	0/0:16,0:16:47.83:0,48,2479	0/0:26,0:26:78.27:0,78,6944	0/0:17,0:17:48.16:0,48,4313	0/0:18,0:18:51.17:0,51,3818	0/0:32,0:32:90.29:0,90,6538	0/0:25,0:25:72.23:0,72,6492	0/0:18,0:18:54.18:0,54,4683	0/0:13,0:13:36.12:0,36,3471	0/0:20,0:20:60.18:0,60,5246	0/0:18,0:18:51.16:0,51,3860	0/0:13,0:13:39.13:0,39,3627	0/0:24,0:24:72.23:0,72,6691	0/0:21,0:21:63.20:0,63,5837	0/0:24,0:24:72.20:0,72,5834	0/0:10,0:10:27.09:0,27,2622	0/0:12,0:12:27.07:0,27,2179	0/0:12,0:12:36.11:0,36,3236	0/0:23,0:23:66.23:0,66,6201	0/0:12,0:12:36.12:0,36,3054	0/0:14,0:14:42.14:0,42,4155	0/0:15,0:15:45.15:0,45,4252	0/0:11,0:11:30.10:0,30,2944	0/0:19,0:19:57.20:0,57,5427	0/0:31,0:31:90.31:0,90,8153	0/0:6,0:6:18.06:0,18,1583
chr10	36101056	.	TTTATTA	T	1065.95	PASS	AB=0.684;AC=25;AF=0.833;AN=30;BaseQRankSum=0.137;DP=211;FS=1.654;HRun=0;HaplotypeScore=48.5592;InbreedingCoeff=0.2918;MQ=72.55;MQ0=1;MQRankSum=-2.917;QD=7.84;ReadPosRankSum=-0.319;VQSLOD=1.1296;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:7,0:7:3.01:60,3,0	1/1:1,2:3:3.01:60,3,0	./.	./.	1/1:7,0:11:3.01:40,3,0	1/1:3,4:7:6.02:121,6,0	1/1:2,0:2:3.01:60,3,0	1/1:32,0:31:5.64:28,6,0	1/1:3,0:5:3:25,3,0	1/1:5,4:9:12.04:241,12,0	1/1:2,3:5:8.99:141,9,0	./.	./.	./.	./.	./.	1/1:11,0:18:3.01:42,3,0	0/1:7,5:13:9.31:112,0,9	./.	./.	./.	./.	0/0:2,0:2:6.02:0,6,193	./.	0/0:6,0:10:11.77:0,12,73	./.	1/1:8,0:12:9.03:122,9,0	1/1:9,0:12:9.03:120,9,0
chr10	36103276	.	A	AT	11438.56	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=2.071;DP=617;FS=0.000;HRun=9;HaplotypeScore=115.9160;InbreedingCoeff=0.9576;MQ=80.91;MQ0=0;MQRankSum=-4.479;QD=26.18;ReadPosRankSum=0.604;VQSLOD=3.5700;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,23:28:63:678,63,0	1/1:1,12:13:36.10:398,36,0	0/0:14,0:14:29.99:0,30,260	0/0:23,0:23:44.38:0,44,353	0/0:22,0:22:56.98:0,57,495	1/1:3,17:20:51.14:564,51,0	1/1:4,13:17:39.11:431,39,0	1/1:6,32:37:44.21:934,44,0	0/0:13,0:13:35.99:0,36,312	1/1:4,20:24:37.09:624,37,0	1/1:1,21:22:66.10:703,66,0	0/0:24,0:24:68.89:0,69,584	1/1:4,21:25:60.16:663,60,0	1/1:2,18:20:42.11:465,42,0	1/1:1,27:27:75.20:830,75,0	0/0:22,0:22:50.94:0,51,437	0/0:24,0:24:65.99:0,66,573	1/1:5,12:19:1.19:380,1,0	1/1:2,19:22:62.59:654,63,0	1/1:6,21:27:40.16:634,40,0	1/1:2,24:26:60.16:664,60,0	1/1:2,16:18:28.99:479,29,0	0/0:15,0:15:32.99:0,33,286	0/0:23,0:23:56.93:0,57,485	1/1:2,13:15:10.04:339,10,0	1/1:3,22:26:65.98:691,66,0	1/1:5,27:33:75.04:811,75,0	1/1:1,15:16:45.12:498,45,0
chr10	36106106	.	G	GACAA	23113.99	PASS	AB=0.596;AC=42;AF=0.750;AN=56;BaseQRankSum=-10.165;DP=798;FS=3.132;HRun=0;HaplotypeScore=109.2606;InbreedingCoeff=0.6479;MQ=58.46;MQ0=13;MQRankSum=2.185;QD=36.00;ReadPosRankSum=-0.294;VQSLOD=4.9610;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:41,0:40:85.69:1297,86,0	1/1:6,8:14:18.06:431,18,0	0/0:26,0:18:20.16:0,20,289	0/0:37,0:19:30.01:0,30,452	1/1:10,19:31:51.14:1185,51,0	1/1:3,15:19:21.07:511,21,0	1/1:9,18:27:18.06:440,18,0	0/1:16,14:30:5.28:598,0,5	0/1:6,18:25:13.67:839,0,14	1/1:4,27:31:69.71:1585,70,0	1/1:7,21:29:66.08:1371,66,0	0/0:35,0:35:78.25:0,78,1260	1/1:6,17:23:45.15:1100,45,0	1/1:7,18:26:42.14:1027,42,0	0/1:3,23:26:7.35:912,0,7	1/1:6,19:27:48.16:1174,48,0	1/1:8,33:42:72.21:1661,72,0	1/1:5,26:30:35.82:1370,36,0	1/1:11,18:30:57.13:1189,57,0	1/1:7,25:33:63.12:1391,63,0	1/1:5,15:20:30.10:734,30,0	1/1:4,16:20:36.12:872,36,0	0/0:24,0:24:54.15:0,54,841	0/0:34,0:34:58.25:0,58,1227	1/1:8,22:30:33.11:807,33,0	1/1:7,26:32:69.19:1564,69,0	0/1:10,14:24:25.41:471,0,25	1/1:5,14:16:24.08:587,24,0
chr10	36106124	.	CAAAAAGA	C	1372.85	PASS	AB=1.000;AC=8;AF=0.143;AN=56;BaseQRankSum=3.181;DP=796;FS=6.991;HRun=0;HaplotypeScore=221.3118;InbreedingCoeff=0.1009;MQ=60.51;MQ0=17;MQRankSum=0.199;QD=6.76;ReadPosRankSum=-6.242;VQSLOD=0.1469;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:24,15:38:83.33:1256,83,0	0/1:12,0:12:36.42:36,0,386	0/0:28,0:19:37.79:0,38,1204	0/0:35,0:19:38.38:0,38,830	0/0:27,0:27:21.67:0,22,1878	0/0:21,0:20:33.11:0,33,1047	0/0:24,0:24:19.82:0,20,1038	0/1:27,0:24:76.27:76,0,1600	0/0:29,0:29:66.23:0,66,2040	0/1:39,0:38:99:100,0,2450	0/1:28,0:29:3.09:3,0,2134	0/0:31,0:31:93.32:0,93,3412	0/0:22,0:22:57.20:0,57,1772	0/0:25,0:24:54.19:0,54,1659	0/0:30,0:29:57.20:0,57,1836	0/0:28,0:27:57.20:0,57,1728	0/0:43,0:43:99:0,99,3063	0/0:30,0:29:69.24:0,69,2156	0/0:34,0:34:0.73:0,1,2044	0/1:37,0:37:17.14:17,0,2079	0/0:19,0:19:39.13:0,39,1213	0/1:20,0:19:20.24:20,0,1227	0/0:22,0:22:66.21:0,66,2435	0/0:35,0:35:99:0,105,3719	0/0:28,0:27:51.16:0,51,1548	0/0:35,0:34:62.45:0,62,2709	0/0:22,0:21:2.98:0,3,1030	0/0:19,0:16:42.14:0,42,1292
chr10	36106130	.	GAAAACAAAACAA	G	752.44	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.145;DP=763;FS=2.077;HRun=0;HaplotypeScore=289.3511;InbreedingCoeff=0.9729;MQ=60.57;MQ0=17;MQRankSum=-5.999;QD=22.13;ReadPosRankSum=0.232;VQSLOD=2.4313;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:27,7:34:44.95:847,45,0	0/0:8,0:8:13.81:0,14,708	0/0:29,0:21:45:0,45,1350	0/0:36,0:18:18.81:0,19,396	0/0:26,0:26:67.11:0,67,3509	0/0:20,0:19:36.12:0,36,2069	0/0:20,0:20:39.13:0,39,1770	0/0:25,0:23:58.14:0,58,2839	0/0:30,0:30:69.24:0,69,3863	0/0:36,0:35:84.76:0,85,4711	0/0:28,0:28:75.21:0,75,4012	0/0:34,0:34:96.33:0,96,5089	0/0:22,0:22:63.22:0,63,3555	0/0:25,0:24:60.68:0,61,3422	0/0:30,0:29:66.23:0,66,3757	0/0:26,0:25:60.21:0,60,3199	0/0:39,0:40:97.58:0,98,5469	0/0:25,0:24:69.24:0,69,3654	0/0:33,0:33:78.21:0,78,3314	0/0:34,0:34:81.75:0,82,4294	0/0:19,0:19:48.16:0,48,2464	0/0:21,0:20:45.15:0,45,2342	0/0:22,0:22:63.22:0,63,3558	0/0:35,0:35:93.32:0,93,5164	0/0:28,0:27:57.20:0,57,3015	0/0:33,0:32:90.30:0,90,4778	0/0:21,0:20:39.13:0,39,2160	0/0:21,0:18:48.16:0,48,2704
chr10	36106139	.	AC	A	424	PASS	AB=0.968;AC=3;AF=0.054;AN=56;BaseQRankSum=6.298;DP=764;FS=8.564;HRun=1;HaplotypeScore=140.2590;InbreedingCoeff=0.4857;MQ=60.79;MQ0=17;MQRankSum=-5.095;QD=7.19;ReadPosRankSum=-1.150;VQSLOD=-0.1802;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,16:29:3.45:498,3,0	0/0:7,0:7:15.01:0,15,192	0/0:28,0:19:22.41:0,22,467	0/1:29,1:17:15.68:16,0,207	0/0:28,0:28:76.12:0,76,1022	0/0:22,0:21:45.12:0,45,590	0/0:20,0:20:48.12:0,48,616	0/0:28,0:26:75.17:0,75,989	0/0:30,0:30:72.24:0,72,1000	0/0:38,0:37:99:0,102,1384	0/0:27,0:27:81.17:0,81,1081	0/0:33,0:33:99:0,99,1359	0/0:24,0:24:69.23:0,69,960	0/0:27,0:26:72.21:0,72,957	0/0:29,0:28:75.25:0,75,1045	0/0:25,0:24:63.21:0,63,878	0/0:41,0:41:88.77:0,89,1403	0/0:28,0:27:77.90:0,78,1042	0/0:32,0:32:74.26:0,74,1041	0/0:35,0:35:87.66:0,88,1173	0/0:20,0:20:51.17:0,51,700	0/0:18,0:17:48.15:0,48,652	0/0:23,0:23:69.23:0,69,961	0/0:33,0:33:99:0,99,1344	0/0:30,0:29:69.13:0,69,900	0/0:36,0:35:99:0,102,1354	0/0:22,0:21:51.13:0,51,673	0/0:21,0:18:51.17:0,51,710
chr10	36107793	.	TA	T	5960.82	PASS	AB=0.675;AC=41;AF=0.732;AN=56;BaseQRankSum=3.306;DP=612;FS=6.976;HRun=14;HaplotypeScore=69.2412;InbreedingCoeff=0.1556;MQ=72.74;MQ0=0;MQRankSum=-1.553;QD=10.98;ReadPosRankSum=3.575;VQSLOD=4.5262;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,31:35:67.44:458,67,0	0/1:3,10:13:28.93:117,0,29	0/0:23,0:13:8.25:0,8,77	0/0:17,0:13:0.86:0,1,101	1/1:5,19:24:31.50:275,32,0	0/1:10,24:38:51.77:320,0,52	1/1:7,15:22:21.35:264,21,0	0/1:7,12:19:34.46:164,0,34	0/1:7,8:16:26.92:121,0,27	1/1:3,18:21:25.70:321,26,0	1/1:3,13:16:35.64:247,36,0	0/1:22,3:27:5.03:5,0,354	1/1:8,17:27:51.63:340,52,0	0/1:7,14:21:36.42:188,0,36	1/1:5,21:26:38.17:387,38,0	1/1:3,17:21:27.77:328,28,0	1/1:1,16:17:47.61:329,48,0	1/1:3,23:26:34.64:383,35,0	1/1:3,8:14:8.42:157,8,0	0/1:7,20:28:19.08:311,0,19	1/1:5,8:13:17.83:123,18,0	1/1:4,15:19:38.59:267,39,0	0/1:21,1:25:1.98:2,0,366	0/0:27,2:29:42.47:0,42,528	1/1:4,15:19:34.07:232,34,0	1/1:4,18:23:52.58:355,53,0	0/1:9,10:20:48.81:135,0,49	1/1:6,7:13:1.66:132,2,0
chr10	36110420	.	CG	C	3434.52	PASS	AB=0.846;AC=38;AF=0.679;AN=56;BaseQRankSum=0.019;DP=434;FS=0.000;HRun=11;HaplotypeScore=63.1701;InbreedingCoeff=0.4247;MQ=79.83;MQ0=0;MQRankSum=0.405;QD=10.34;ReadPosRankSum=4.611;VQSLOD=2.6879;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:22:24.32:0,24,169	1/1:4,0:4:2.96:20,3,0	0/0:18,0:15:11.21:0,11,83	0/0:18,0:17:12.60:0,13,85	0/1:8,4:12:14.04:104,0,14	1/1:8,9:17:20.96:172,21,0	1/1:9,10:20:28.96:226,29,0	1/1:7,5:13:16.84:128,17,0	0/1:10,5:15:11.04:121,0,11	1/1:10,4:14:14.96:122,15,0	1/1:3,4:7:5.99:49,6,0	0/0:14,0:14:29.95:0,30,257	1/1:6,4:10:14.61:121,15,0	1/1:13,5:18:29.92:241,30,0	1/1:11,5:17:0.98:149,1,0	0/1:12,3:15:1.06:148,0,1	1/1:9,17:27:49.94:400,50,0	1/1:7,11:19:34.98:276,35,0	0/1:15,4:20:65.65:115,0,66	1/1:4,1:5:2.99:25,3,0	1/1:21,19:40:62.38:483,62,0	1/1:2,7:9:11.97:98,12,0	0/1:3,0:4:8.66:18,0,9	0/0:21,0:21:33.04:0,33,328	1/1:9,4:13:17.96:147,18,0	0/1:15,1:16:43.10:43,0,180	1/1:11,5:17:28.97:227,29,0	0/0:8,0:8:5.99:0,6,49
chr10	36112088	.	C	CT	2385.26	PASS	AB=0.916;AC=48;AF=0.857;AN=56;BaseQRankSum=1.093;DP=568;FS=0.745;HRun=16;HaplotypeScore=90.4117;InbreedingCoeff=0.3832;MQ=65.20;MQ0=3;MQRankSum=-0.942;QD=4.29;ReadPosRankSum=-2.943;VQSLOD=0.7068;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:17,3:39:21.66:123,22,0	1/1:3,0:8:11.40:58,11,0	0/1:19,0:13:0.93:1,0,14	0/1:9,0:6:2.12:2,0,5	1/1:17,11:29:20.34:123,20,0	1/1:7,4:24:22.88:123,23,0	1/1:8,10:20:20.25:121,20,0	1/1:24,8:33:37.15:243,37,0	0/1:11,1:14:12.25:53,0,12	1/1:18,0:25:27.78:157,28,0	1/1:4,2:14:20.42:118,20,0	0/1:19,0:21:1.47:1,0,73	1/1:11,0:16:16.51:86,17,0	1/1:7,0:16:11.46:61,11,0	1/1:5,6:11:8.24:47,8,0	0/1:11,12:23:32.32:54,0,32	1/1:12,13:25:17.93:149,18,0	1/1:14,2:38:42.13:203,42,0	1/1:16,0:29:31.64:172,32,0	1/1:8,0:16:15.84:83,16,0	1/1:7,1:18:5.68:28,6,0	1/1:5,1:13:23.18:133,23,0	0/0:10,0:12:13.36:0,13,67	0/1:10,2:19:2.96:3,0,47	1/1:12,1:26:15.30:83,15,0	1/1:10,0:22:31.17:175,31,0	1/1:7,2:18:15.04:79,15,0	1/1:6,0:8:8.64:46,9,0
chr10	36113175	.	T	TTGTATGTA	2577.36	PASS	AB=0.993;AC=11;AF=0.196;AN=56;BaseQRankSum=-0.869;DP=777;FS=0.719;HRun=0;HaplotypeScore=197.9203;InbreedingCoeff=0.5430;MQ=67.75;MQ0=2;MQRankSum=-6.524;QD=12.45;ReadPosRankSum=-2.682;VQSLOD=2.4090;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:45,0:46:19.94:323,0,20	0/0:8,0:8:6.02:0,6,149	0/0:36,0:28:2.88:0,3,15	0/0:18,0:13:3.01:0,3,34	1/1:20,9:30:8.37:365,8,0	0/0:31,0:31:42.13:0,42,946	0/0:23,0:23:27.09:0,27,604	0/1:34,0:32:24.86:25,0,293	1/1:17,8:25:24.08:949,24,0	0/0:34,0:35:57.20:0,57,1299	0/0:29,0:29:48.08:0,48,1033	0/0:20,0:20:33.08:0,33,590	0/0:25,0:25:54.16:0,54,1104	0/0:29,0:29:39.12:0,39,877	0/0:29,0:29:51.15:0,51,1107	1/1:17,10:26:21.07:856,21,0	1/1:15,5:21:6.02:185,6,0	0/1:24,0:23:35.37:35,0,519	0/0:21,0:21:27.04:0,27,515	0/0:25,0:25:33.11:0,33,739	0/0:26,0:26:60.21:0,60,1335	0/0:24,0:24:29.71:0,30,888	0/0:35,0:35:60.67:0,61,1404	0/0:27,0:27:36.11:0,36,814	0/0:41,0:41:57.17:0,57,1280	0/0:36,0:36:54.19:0,54,1319	0/0:31,0:31:42.10:0,42,934	0/0:21,0:21:30.10:0,30,708
chr10	36113275	.	TA	T	8882.34	PASS	AB=0.889;AC=39;AF=0.696;AN=56;BaseQRankSum=-0.875;DP=627;FS=1.180;HRun=11;HaplotypeScore=75.7101;InbreedingCoeff=0.9242;MQ=71.12;MQ0=0;MQRankSum=-1.119;QD=18.90;ReadPosRankSum=1.538;VQSLOD=5.9055;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,23:25:58.96:474,59,0	1/1:0,10:10:20.97:172,21,0	0/0:10,0:10:18.01:0,18,178	0/1:7,1:8:8.40:8,0,100	0/0:28,2:30:26.24:0,26,686	1/1:3,12:15:35.95:296,36,0	1/1:3,18:21:52.48:423,52,0	1/1:7,24:31:39.90:534,40,0	0/0:15,0:15:45.10:0,45,472	1/1:3,24:27:49.62:565,50,0	1/1:1,25:27:73.95:597,74,0	0/0:15,0:15:30.06:0,30,307	1/1:1,15:17:40.99:326,41,0	1/1:3,23:26:59.92:493,60,0	1/1:3,22:25:56.93:468,57,0	0/0:16,0:16:45.11:0,45,475	0/0:21,1:23:38.45:0,38,601	1/1:5,28:34:73.70:596,74,0	1/1:5,20:26:41.41:453,41,0	1/1:4,31:35:79.10:643,79,0	1/1:2,14:16:39.43:322,39,0	1/1:4,25:29:74.91:616,75,0	0/0:26,0:27:53.18:0,53,681	0/0:21,0:21:51.08:0,51,525	1/1:2,21:23:50.94:419,51,0	1/1:7,19:26:56.91:468,57,0	1/1:6,23:29:68.89:567,69,0	1/1:1,19:20:53.92:443,54,0
chr10	36114015	.	GGTGGAGCACGAGGATTGT	G	6838.69	PASS	AB=0.542;AC=31;AF=0.554;AN=56;BaseQRankSum=2.554;DP=758;FS=6.657;HRun=0;HaplotypeScore=359.1668;InbreedingCoeff=0.6616;MQ=61.91;MQ0=3;MQRankSum=2.425;QD=13.87;ReadPosRankSum=-0.189;VQSLOD=2.1251;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:34,0:34:66.52:722,67,0	0/0:5,0:5:0.47:0,0,1	0/0:18,0:11:29.63:0,30,353	0/0:34,0:29:48.28:0,48,823	0/0:22,0:22:53.95:0,54,1855	1/1:20,0:20:37.76:384,38,0	1/1:31,0:31:55.02:452,55,0	1/1:17,0:17:15.69:123,16,0	0/0:34,0:34:93.13:0,93,3083	1/1:29,0:29:4.09:659,4,0	0/1:2,21:23:11.80:13,0,12	0/0:40,0:40:99:0,106,4037	1/1:5,31:36:2.94:244,3,0	0/1:5,30:35:0.54:204,0,1	0/1:7,29:36:19.95:103,0,20	0/0:31,0:31:81.13:0,81,2609	0/0:29,0:29:81.01:0,81,2817	1/1:15,0:15:41.68:346,42,0	1/1:5,27:32:81.58:1105,82,0	0/1:2,16:18:3.13:92,0,3	1/1:70,0:68:52.07:667,52,0	0/1:5,16:21:0:0,0,2	0/0:14,0:14:32.99:0,33,1386	0/0:37,0:37:99:0,99,3920	1/1:19,0:19:39.15:447,39,0	1/1:5,29:34:79.83:892,80,0	1/1:19,0:18:35.06:338,35,0	1/1:4,0:4:5.99:48,6,0
chr10	36115570	.	G	GTT	1466.38	PASS	AB=0.749;AC=26;AF=0.464;AN=56;BaseQRankSum=-2.743;DP=620;FS=0.000;HRun=14;HaplotypeScore=171.8787;InbreedingCoeff=0.0090;MQ=74.92;MQ0=6;MQRankSum=1.347;QD=3.13;ReadPosRankSum=-2.172;VQSLOD=0.1410;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:38:53.73:54,0,137	0/1:4,2:8:35.37:36,0,35	0/1:35,0:25:11.54:12,0,105	0/0:23,0:15:2.21:0,2,61	0/0:6,0:22:12.07:0,12,123	0/1:10,2:24:4.24:118,0,4	0/1:12,0:16:18.39:18,0,37	0/1:29,0:34:59.48:90,0,59	0/0:7,0:21:43.47:0,43,184	1/1:7,1:27:23.31:234,23,0	0/1:11,1:31:49.19:151,0,49	0/0:12,0:15:26.87:0,27,201	0/1:6,1:17:14.49:68,0,14	1/1:5,0:17:13.70:46,14,0	0/1:7,1:12:12.02:70,0,12	0/0:2,0:15:32.90:0,33,140	0/0:10,0:25:38.14:0,38,162	1/1:10,0:26:25.48:132,25,0	0/1:18,0:20:25.10:25,0,60	0/1:24,0:28:72.41:77,0,72	1/1:1,1:8:7.75:56,8,0	1/1:4,1:16:21.41:142,21,0	0/0:18,0:20:17.68:0,18,178	0/0:8,0:8:23.97:0,24,200	0/1:14,0:33:33.34:33,0,48	0/1:11,1:34:0.87:183,0,1	0/1:9,0:26:40.96:45,0,41	1/1:5,5:12:9.71:57,10,0
chr10	36115974	.	GT	G	12899.87	PASS	AB=0.663;AC=25;AF=0.446;AN=56;BaseQRankSum=19.294;DP=946;FS=8.753;HRun=1;HaplotypeScore=173.7138;InbreedingCoeff=0.2005;MQ=83.85;MQ0=0;MQRankSum=-3.693;QD=21.36;ReadPosRankSum=2.994;VQSLOD=4.2720;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:87,0:87:99:0,256,3983	0/1:5,6:11:99:180,0,209	0/0:37,0:38:99:0,111,1656	0/0:22,0:22:66.18:0,66,978	0/0:19,0:19:57.16:0,57,860	0/1:16,22:38:99:769,0,653	0/1:27,34:61:99:1047,0,1102	0/1:19,23:42:99:782,0,787	0/0:51,0:51:99:0,154,2440	1/1:0,15:16:45.14:606,45,0	1/1:0,24:24:60.16:817,60,0	0/0:26,0:26:78.25:0,78,1222	1/1:0,18:18:54.18:755,54,0	0/1:28,27:55:99:970,0,1073	1/1:0,21:21:63.17:859,63,0	0/0:16,0:16:48.16:0,48,767	0/0:22,0:22:66.17:0,66,982	0/1:34,20:54:99:598,0,1464	0/1:14,19:33:99:657,0,572	0/1:20,19:39:99:664,0,723	0/1:40,32:72:99:1087,0,1598	0/1:16,20:36:99:697,0,563	0/0:22,0:22:63.20:0,63,963	0/0:39,0:39:99:0,117,1855	0/1:21,18:39:99:524,0,852	1/1:0,20:20:60.20:839,60,0	1/1:0,21:21:63.21:880,63,0	1/1:0,4:4:12.04:168,12,0
chr10	36117628	.	AG	A	11293.99	PASS	AB=0.691;AC=25;AF=0.446;AN=56;BaseQRankSum=15.339;DP=1030;FS=3.746;HRun=3;HaplotypeScore=102.0183;InbreedingCoeff=0.2042;MQ=83.97;MQ0=0;MQRankSum=-2.225;QD=16.71;ReadPosRankSum=3.463;VQSLOD=4.6351;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:87,0:87:99:0,259,3607	0/1:9,3:12:99:105,0,264	0/0:37,0:37:99:0,105,1357	0/0:23,0:23:60.96:0,61,874	0/0:27,0:27:78.26:0,78,1120	0/1:17,15:32:99:430,0,600	0/1:31,20:51:99:358,0,1049	0/1:27,24:51:99:716,0,972	0/0:40,0:40:99:0,117,1681	1/1:2,23:25:69.19:831,69,0	1/1:0,8:8:24.08:297,24,0	0/0:38,0:38:99:0,108,1519	1/1:0,29:29:71.98:890,72,0	0/1:32,26:58:99:770,0,959	1/1:1,18:19:51.15:632,51,0	0/0:19,0:19:57.17:0,57,801	0/0:40,0:40:99:0,120,1691	0/1:28,34:62:99:1079,0,944	0/1:27,18:45:99:496,0,818	0/1:22,28:50:99:869,0,758	0/1:59,50:109:99:1216,0,1914	0/1:19,18:37:99:541,0,667	0/0:11,0:11:33.09:0,33,439	0/0:32,0:32:96.30:0,96,1343	0/1:24,23:47:99:614,0,838	1/1:1,20:21:57.18:706,57,0	1/1:0,13:13:39.12:483,39,0	1/1:0,7:7:21.07:260,21,0
chr10	36117924	.	T	TG	9698.76	PASS	AB=0.687;AC=14;AF=0.250;AN=56;BaseQRankSum=-16.605;DP=846;FS=4.377;HRun=2;HaplotypeScore=82.0719;InbreedingCoeff=-0.3340;MQ=74.97;MQ0=0;MQRankSum=-3.464;QD=15.95;ReadPosRankSum=-0.994;VQSLOD=4.4626;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:45,41:86:99:1443,0,1281	0/1:11,12:23:99:452,0,291	0/1:29,8:38:99:251,0,747	0/0:25,0:25:60.15:0,60,717	0/0:25,0:25:72.23:0,72,891	0/1:18,14:32:99:500,0,559	0/1:23,23:46:99:858,0,672	0/1:27,28:55:99:1017,0,702	0/1:25,14:39:99:450,0,770	0/0:18,0:18:51.16:0,51,632	0/0:9,0:9:24.07:0,24,298	0/0:20,0:20:60.18:0,60,731	0/0:20,0:20:57.17:0,57,696	0/1:27,17:44:99:600,0,735	0/0:17,0:17:51.16:0,51,632	0/0:15,0:15:42.13:0,42,521	0/0:15,0:15:42.09:0,42,503	0/1:19,23:42:99:712,0,524	0/1:30,22:52:99:766,0,748	0/1:22,21:43:99:700,0,648	0/1:20,22:42:99:750,0,555	0/1:14,17:31:99:563,0,399	0/0:12,0:12:33.10:0,33,404	0/0:22,0:22:53.02:0,53,734	0/1:18,17:35:99:638,0,462	0/0:13,0:13:36.11:0,36,446	0/0:21,0:21:60.19:0,60,744	0/0:6,0:6:18.06:0,18,223
chr10	36118750	.	T	TA	5129.73	PASS	AB=0.693;AC=7;AF=0.125;AN=56;BaseQRankSum=-14.308;DP=1154;FS=0.349;HRun=1;HaplotypeScore=105.3599;InbreedingCoeff=0.8366;MQ=86.47;MQ0=0;MQRankSum=-2.849;QD=31.86;ReadPosRankSum=2.394;VQSLOD=4.6088;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:93,0:93:99:0,274,3520	0/0:15,0:15:42.14:0,42,542	0/0:52,0:52:99:0,141,1773	0/0:26,0:27:74.43:0,74,923	1/1:2,33:35:99:1434,99,0	0/0:53,0:53:99:0,157,2023	0/0:66,0:66:99:0,193,2460	0/0:69,0:69:99:0,196,2481	0/1:34,27:61:99:953,0,1060	0/0:27,0:27:78.25:0,78,1010	0/0:19,0:19:54.18:0,54,701	0/0:32,0:32:96.31:0,96,1245	0/0:21,0:21:63.19:0,63,803	0/0:54,0:54:99:0,153,1987	0/0:34,0:34:93.30:0,93,1208	1/1:0,38:38:99:1664,111,0	1/1:1,26:27:72.24:1079,72,0	0/0:51,0:51:99:0,150,1943	0/0:31,0:31:87.27:0,87,1105	0/0:53,0:53:99:0,159,2044	0/0:67,0:67:99:0,196,2531	0/0:59,0:59:99:0,175,2257	0/0:17,0:17:51.15:0,51,646	0/0:25,0:25:69.22:0,69,894	0/0:61,0:61:99:0,181,2321	0/0:37,0:37:99:0,108,1399	0/0:20,0:20:60.18:0,60,764	0/0:10,0:10:30.10:0,30,388
chr10	36119961	.	GA	G	14146.68	PASS	AB=0.652;AC=25;AF=0.446;AN=56;BaseQRankSum=13.000;DP=1008;FS=5.821;HRun=1;HaplotypeScore=105.8207;InbreedingCoeff=0.1964;MQ=84.12;MQ0=0;MQRankSum=-2.279;QD=22.35;ReadPosRankSum=0.696;VQSLOD=4.7211;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:98,0:98:99:0,292,4646	0/1:8,10:18:99:326,0,332	0/0:43,0:42:99:0,126,1927	0/0:28,0:28:81.26:0,81,1249	0/0:29,0:29:87.30:0,87,1391	0/1:15,23:38:99:779,0,517	0/1:29,24:53:99:848,0,1207	0/1:29,23:52:99:731,0,1216	0/0:56,0:56:99:0,169,2685	1/1:0,23:23:63.19:862,63,0	1/1:0,18:18:45.15:626,45,0	0/0:19,0:19:57.19:0,57,908	1/1:0,26:26:72.08:1005,72,0	0/1:24,30:54:99:1057,0,968	1/1:0,29:29:78.26:1091,78,0	0/0:21,0:21:63.21:0,63,1007	0/0:36,0:36:99:0,108,1698	0/1:15,20:35:99:617,0,596	0/1:26,20:46:99:701,0,1100	0/1:18,31:49:99:1075,0,722	0/1:22,40:62:99:1336,0,857	0/1:21,21:42:99:683,0,772	0/0:13,0:13:39.13:0,39,623	0/0:31,0:31:93.32:0,93,1487	0/1:23,23:46:99:796,0,832	1/1:0,19:19:54.15:735,54,0	1/1:0,20:20:54.18:755,54,0	1/1:0,3:3:9.03:126,9,0
chr10	36120184	.	GAA	G	4935.43	PASS	AB=0.652;AC=45;AF=0.804;AN=56;BaseQRankSum=1.605;DP=571;FS=3.251;HRun=15;HaplotypeScore=89.6867;InbreedingCoeff=0.6694;MQ=76.18;MQ0=5;MQRankSum=0.539;QD=11.45;ReadPosRankSum=4.490;VQSLOD=4.2201;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,0:37:46.41:209,46,0	1/1:0,8:9:11.31:147,11,0	0/0:59,0:28:11.73:0,12,57	0/0:28,0:15:3:0,3,29	1/1:4,0:15:22.29:94,22,0	1/1:4,15:21:0.03:248,0,0	1/1:1,16:20:38.19:356,38,0	1/1:13,11:24:3.36:228,3,0	1/1:7,0:21:19.09:83,19,0	1/1:7,13:21:41.13:316,41,0	1/1:5,16:21:40.78:364,41,0	0/0:13,0:14:37.89:0,38,376	1/1:11,6:18:26.57:222,27,0	1/1:13,5:18:25.11:195,25,0	1/1:9,10:19:37.40:317,37,0	1/1:0,0:12:24.70:106,25,0	1/1:6,0:37:24.70:199,25,0	1/1:4,13:17:29.90:264,30,0	0/1:7,8:15:23.56:152,0,24	1/1:7,15:22:3.55:325,4,0	1/1:5,3:8:7.61:97,8,0	1/1:7,13:20:23.47:231,23,0	0/0:16,0:18:49.55:0,50,525	0/0:21,0:21:45.10:0,45,561	1/1:7,2:10:19.90:137,20,0	1/1:7,12:19:13.46:247,13,0	1/1:5,11:16:29.84:260,30,0	1/1:4,4:10:2.27:137,2,0
chr10	36120380	.	A	AGAGG	13149.78	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-9.061;DP=458;FS=13.822;HRun=0;HaplotypeScore=97.6403;InbreedingCoeff=0.9058;MQ=67.97;MQ0=3;MQRankSum=-5.337;QD=39.73;ReadPosRankSum=2.037;VQSLOD=4.6305;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,16:22:36.12:894,36,0	1/1:5,3:8:9.03:225,9,0	0/0:26,0:17:45.13:0,45,704	0/0:41,0:28:48.66:0,49,651	1/1:4,7:11:18.06:448,18,0	1/1:6,20:25:54.14:1292,54,0	1/1:9,15:25:33.11:823,33,0	1/1:9,8:17:21.96:510,22,0	1/1:2,8:13:21.07:524,21,0	1/1:5,9:14:30.04:566,30,0	1/1:6,3:9:14.90:278,15,0	0/0:22,0:22:60.18:0,60,958	1/1:3,9:12:24.08:599,24,0	1/1:8,16:24:48.16:1193,48,0	1/1:5,6:11:12.04:299,12,0	1/1:6,9:16:27.09:674,27,0	1/1:4,6:10:18.06:449,18,0	1/1:4,6:11:18.90:396,19,0	1/1:7,5:13:15.05:344,15,0	1/1:8,7:15:24.08:571,24,0	1/1:4,16:21:33.11:822,33,0	1/1:0,3:4:12.04:296,12,0	0/0:11,0:11:18.06:0,18,301	0/0:27,0:27:63.15:0,63,985	1/1:6,3:9:8.99:169,9,0	1/1:6,13:19:36.12:870,36,0	1/1:5,9:16:36.12:888,36,0	1/1:1,1:2:2.97:20,3,0
chr10	36122666	.	AG	A	3130.01	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=8.939;DP=699;FS=6.092;HRun=2;HaplotypeScore=69.2193;InbreedingCoeff=0.9914;MQ=58.69;MQ0=3;MQRankSum=3.742;QD=34.78;ReadPosRankSum=2.512;VQSLOD=4.0749;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:44:99:0,132,1960	0/0:16,0:16:48.16:0,48,717	0/0:17,0:13:36.12:0,36,528	0/0:24,0:20:60.12:0,60,825	1/1:0,16:16:39.13:506,39,0	0/0:20,0:20:57.19:0,57,853	0/0:34,0:34:99:0,102,1505	0/0:24,0:24:72.24:0,72,1077	1/1:0,21:21:59.91:778,60,0	0/0:22,0:22:63.21:0,63,915	0/0:14,0:14:42.02:0,42,556	0/0:33,0:33:96.32:0,96,1409	0/0:32,0:32:93.31:0,93,1388	0/0:15,0:15:45.15:0,45,674	0/0:44,0:44:99:0,132,1940	1/1:0,21:21:63.20:818,63,0	1/1:0,32:32:93.26:1188,93,0	0/0:28,0:28:78.20:0,78,1135	0/0:19,0:18:45.12:0,45,650	0/0:25,0:25:69.18:0,69,969	0/0:49,0:49:99:0,147,2137	0/0:16,0:16:42.11:0,42,579	0/0:19,0:19:54.16:0,54,769	0/0:35,0:35:99:0,102,1480	0/0:21,0:21:60.19:0,60,879	0/0:26,0:26:78.26:0,78,1143	0/0:27,0:26:81.27:0,81,1211	0/0:4,0:4:12.04:0,12,180
chr10	36128929	.	A	AAG	2362.48	PASS	AB=0.958;AC=29;AF=0.518;AN=56;BaseQRankSum=7.094;DP=307;FS=12.522;HRun=0;HaplotypeScore=68.3601;InbreedingCoeff=0.0068;MQ=69.82;MQ0=3;MQRankSum=-1.682;QD=10.01;ReadPosRankSum=4.954;VQSLOD=1.5136;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:48:0,48,621	0/1:4,0:4:18.92:23,0,19	0/0:7,0:4:9.02:0,9,102	0/0:23,0:8:10.31:0,10,86	0/1:9,0:9:10.23:10,0,61	1/1:6,0:6:8.99:75,9,0	0/1:7,0:7:34.88:52,0,35	0/1:35,0:33:50.78:455,0,51	1/1:7,0:7:8.94:82,9,0	1/1:7,0:7:19.46:141,19,0	0/1:7,4:11:36.94:37,0,82	0/0:9,0:9:21.04:0,21,264	0/1:3,1:5:13.54:14,0,19	0/1:11,0:11:70.74:97,0,71	0/1:5,0:5:11.95:63,0,12	0/1:9,0:9:55.80:57,0,56	1/1:25,0:25:15:311,15,0	1/1:13,0:13:26.98:227,27,0	0/1:15,0:14:83.63:139,0,84	0/1:16,0:16:71.17:71,0,138	1/1:6,0:6:5.98:47,6,0	0/0:5,0:5:3:0,3,25	0/0:4,0:4:6.02:0,6,86	0/0:4,0:4:12.03:0,12,154	0/1:14,0:14:1.92:156,0,2	1/1:3,0:3:8.97:70,9,0	0/1:14,0:13:19.06:159,0,19	1/1:14,0:14:9.09:255,9,0
chr10	36128931	.	G	GAT	6192.81	PASS	AC=42;AF=0.778;AN=54;BaseQRankSum=-2.638;DP=308;FS=0.780;HRun=0;HaplotypeScore=58.5572;InbreedingCoeff=0.7252;MQ=67.19;MQ0=4;MQRankSum=-2.435;QD=25.91;ReadPosRankSum=-2.281;VQSLOD=4.7745;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:39.12:0,39,482	1/1:1,3:4:3.01:47,3,0	0/0:7,0:4:6.02:0,6,76	0/0:25,0:7:4.34:0,4,28	1/1:6,3:9:3.01:46,3,0	1/1:0,6:6:9.03:150,9,0	1/1:5,2:7:9.03:142,9,0	1/1:13,26:38:95.03:1392,95,0	1/1:5,4:9:12.04:183,12,0	1/1:6,1:7:21.06:314,21,0	1/1:8,3:11:6.02:98,6,0	0/0:8,0:8:18.03:0,18,204	1/1:5,0:5:3.01:45,3,0	1/1:8,3:11:15.05:242,15,0	1/1:1,4:5:9.03:150,9,0	1/1:7,1:8:11.99:162,12,0	1/1:12,14:26:39.11:589,39,0	1/1:1,13:14:27.09:449,27,0	1/1:9,6:14:27.08:391,27,0	1/1:13,2:15:21.06:296,21,0	1/1:5,1:6:9.02:122,9,0	./.	0/0:3,0:3:6.02:0,6,76	0/0:4,0:4:9.03:0,9,115	1/1:1,11:12:21.07:348,21,0	1/1:0,4:4:9.03:148,9,0	1/1:6,5:10:24.08:374,24,0	1/1:1,13:14:30.10:506,30,0
chr10	36128944	.	A	ATG	1735.32	PASS	AB=1.000;AC=33;AF=0.635;AN=52;BaseQRankSum=3.967;DP=279;FS=3.007;HRun=0;HaplotypeScore=69.0121;InbreedingCoeff=0.1592;MQ=62.06;MQ0=4;MQRankSum=-2.128;QD=7.64;ReadPosRankSum=-1.330;VQSLOD=3.0300;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:38.50:0,38,260	1/1:4,0:4:5.99:50,6,0	./.	0/1:27,0:8:10.71:11,0,24	1/1:2,6:8:2.97:20,3,0	0/1:5,0:5:12.32:56,0,12	1/1:3,0:3:2.94:18,3,0	0/1:39,0:37:84.90:314,0,85	1/1:4,6:10:6.91:106,7,0	1/1:7,0:7:14.36:89,14,0	0/1:7,0:7:18.12:18,0,38	0/0:6,0:6:18.05:0,18,254	1/1:4,0:4:4.22:23,4,0	1/1:6,0:6:9.38:68,9,0	0/1:3,0:3:14.33:36,0,14	1/1:3,2:5:5.14:61,5,0	1/1:15,10:25:29.17:410,29,0	0/1:15,0:15:35.56:146,0,36	1/1:12,0:11:17.30:137,17,0	1/1:9,0:9:6.62:31,7,0	1/1:7,0:7:6.45:47,6,0	./.	0/0:2,0:2:5.99:0,6,50	0/0:4,0:4:12.01:0,12,157	0/1:12,0:12:0.38:134,0,0	0/1:8,0:8:5.43:5,0,135	0/1:11,0:11:44.38:121,0,44	0/0:15,0:15:35.73:0,36,307
chr10	36129478	.	GTCAGGGC	G	6069.99	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=13.369;DP=704;FS=1.451;HRun=0;HaplotypeScore=162.6334;InbreedingCoeff=0.9989;MQ=81.98;MQ0=0;MQRankSum=-14.087;QD=62.58;ReadPosRankSum=2.825;VQSLOD=4.6071;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,160,6376	0/0:10,0:10:30.09:0,30,1050	0/0:19,0:19:54.13:0,54,1740	0/0:29,0:29:62.89:0,63,2468	1/1:0,17:17:33.11:868,33,0	0/0:17,0:17:51.18:0,51,2042	0/0:31,0:31:87.30:0,87,3455	0/0:37,0:37:99:0,105,3977	1/1:4,23:27:60.21:1572,60,0	0/0:20,0:20:57.16:0,57,2027	0/0:10,0:10:27.09:0,27,1067	0/0:34,0:34:99:0,99,3926	0/0:20,0:20:60.21:0,60,2354	0/0:21,0:21:60.21:0,60,2394	0/0:29,0:29:87.28:0,87,3392	1/1:0,30:30:84.29:2208,84,0	1/1:2,21:23:54.19:1422,54,0	0/0:22,0:22:60.21:0,60,2386	0/0:17,0:17:48.15:0,48,1719	0/0:18,0:18:51.16:0,51,1847	0/0:71,0:71:99:0,211,8110	0/0:19,0:19:57.18:0,57,2098	0/0:16,0:16:48.16:0,48,1887	0/0:38,0:38:99:0,111,4284	0/0:17,0:17:48.16:0,48,1912	0/0:33,0:33:96.32:0,96,3717	0/0:16,0:16:45.15:0,45,1771	0/0:8,0:8:24.08:0,24,950
chr10	36129757	.	CCG	C	2958.54	PASS	AB=0.991;AC=32;AF=0.593;AN=54;BaseQRankSum=-1.299;DP=355;FS=16.589;HRun=0;HaplotypeScore=89.7831;InbreedingCoeff=0.1046;MQ=82.76;MQ0=0;MQRankSum=-3.572;QD=10.64;ReadPosRankSum=-4.569;VQSLOD=0.8291;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:5,18:22:57.60:773,58,0	0/1:2,0:2:3.79:4,0,12	0/0:15,0:15:11.14:0,11,467	0/0:16,0:16:18.30:0,18,276	1/1:9,1:10:16.75:117,17,0	0/1:16,0:16:36.96:120,0,37	0/1:15,2:17:88.63:89,0,139	1/1:13,0:13:9.28:152,9,0	1/1:9,0:9:18.24:78,18,0	0/1:7,0:7:0.32:80,0,0	./.	0/0:12,0:12:33.11:0,33,567	0/1:9,0:9:25.55:26,0,42	1/1:13,1:14:20.78:182,21,0	0/1:14,0:14:14.16:113,0,14	1/1:11,2:13:26.69:181,27,0	1/1:24,5:28:61.65:421,62,0	0/1:15,0:15:31:115,0,31	0/1:9,0:9:35.73:45,0,36	0/1:7,0:7:4.67:49,0,5	0/1:17,0:17:9.64:195,0,10	0/1:10,0:10:7.04:7,0,92	0/0:12,0:12:35.84:0,36,491	0/0:16,0:16:45.15:0,45,774	0/1:7,0:7:14.73:15,0,16	1/1:14,0:14:5.07:162,5,0	1/1:14,0:14:2:92,2,0	1/1:9,0:9:3.36:117,3,0
chr10	36129758	.	CG	C	5240.51	PASS	AB=0.962;AC=45;AF=0.833;AN=54;BaseQRankSum=-3.298;DP=352;FS=23.629;HRun=1;HaplotypeScore=77.6528;InbreedingCoeff=0.5363;MQ=83.97;MQ0=0;MQRankSum=-4.219;QD=17.07;ReadPosRankSum=-5.747;VQSLOD=2.4810;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:20,2:21:57.16:382,57,0	1/1:1,1:2:2.20:39,2,0	0/1:16,0:16:6.89:7,0,297	0/1:15,1:16:20.60:21,0,195	1/1:4,6:10:17.95:189,18,0	1/1:14,2:16:27.38:238,27,0	0/1:16,1:17:6.34:136,0,6	1/1:8,4:12:22.40:230,22,0	1/1:2,7:9:21.03:266,21,0	1/1:6,1:7:14.07:158,14,0	./.	0/0:11,0:11:33.11:0,33,441	1/1:7,2:9:2.55:121,3,0	1/1:13,1:14:32.97:284,33,0	1/1:12,2:14:19.92:289,20,0	1/1:3,10:13:30.04:363,30,0	1/1:12,17:28:68.98:787,69,0	1/1:14,1:15:18.94:257,19,0	1/1:7,1:8:6.86:74,7,0	1/1:7,0:7:12.24:119,12,0	1/1:17,1:18:32.11:281,32,0	1/1:10,0:10:10.38:90,10,0	0/0:12,0:12:35.83:0,36,401	0/0:16,0:16:45.15:0,45,603	1/1:6,1:7:12.26:105,12,0	1/1:10,3:13:32.99:326,33,0	1/1:12,2:14:27.05:262,27,0	1/1:9,0:9:26.35:216,26,0
chr10	36129786	.	A	AG	8781.28	PASS	AB=0.733;AC=54;AF=0.964;AN=56;BaseQRankSum=-3.066;DP=355;FS=0.000;HRun=3;HaplotypeScore=99.1978;InbreedingCoeff=-0.0476;MQ=78.02;MQ0=0;MQRankSum=-2.734;QD=24.74;ReadPosRankSum=2.885;VQSLOD=4.2397;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,17:20:50.17:535,50,0	1/1:1,2:3:8.94:88,9,0	0/1:7,5:12:37.97:207,0,38	0/1:13,5:19:28.79:225,0,29	1/1:1,9:10:24.07:276,24,0	1/1:3,5:8:17.08:185,17,0	1/1:6,11:17:33.27:377,33,0	1/1:3,6:9:17.25:210,17,0	1/1:1,11:12:33.08:370,33,0	1/1:4,7:11:22.30:254,22,0	1/1:0,5:5:12.04:142,12,0	1/1:4,11:15:33.10:409,33,0	1/1:3,13:16:35.97:401,36,0	1/1:5,9:14:32.10:346,32,0	1/1:3,9:12:29.12:335,29,0	1/1:2,9:11:27.07:311,27,0	1/1:5,14:20:49.36:550,49,0	1/1:3,12:15:36.11:444,36,0	1/1:1,5:6:15.04:186,15,0	1/1:5,7:12:18.05:207,18,0	1/1:3,17:20:41.90:505,42,0	1/1:1,8:9:12.03:142,12,0	1/1:6,11:17:33.08:378,33,0	1/1:3,14:17:45.04:494,45,0	1/1:3,9:12:29.11:310,29,0	1/1:4,11:15:38.59:430,39,0	1/1:0,11:14:36.02:390,36,0	1/1:1,2:3:5.62:75,6,0
chr10	36129787	.	GGA	G	1858.87	PASS	AB=0.924;AC=49;AF=0.875;AN=56;BaseQRankSum=-6.017;DP=356;FS=0.000;HRun=0;HaplotypeScore=125.8265;InbreedingCoeff=0.0494;MQ=77.89;MQ0=0;MQRankSum=6.689;QD=5.50;ReadPosRankSum=-2.270;VQSLOD=2.6756;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:20,1:20:2.60:91,3,0	1/1:4,0:4:2.15:25,2,0	0/1:11,2:12:49.22:118,0,49	0/1:17,2:19:73.92:86,0,74	0/0:10,0:10:0.94:0,1,5	1/1:6,2:8:9.29:72,9,0	1/1:18,0:18:11.97:256,12,0	1/1:9,0:9:9.18:91,9,0	1/1:12,0:12:3.37:28,3,0	1/1:9,2:11:12:108,12,0	1/1:6,0:6:5.34:34,5,0	1/1:14,0:14:15.52:74,16,0	1/1:13,3:16:5.79:70,6,0	1/1:11,2:13:7.32:75,7,0	1/1:11,1:12:7.45:56,7,0	1/1:11,0:11:4.96:34,5,0	1/1:19,1:20:7.94:76,8,0	1/1:15,0:15:13.89:49,14,0	1/1:7,0:7:5.44:53,5,0	1/1:7,5:12:2.37:47,2,0	1/1:20,0:20:1.93:79,2,0	0/0:8,0:8:3.65:0,4,8	1/1:14,2:17:1.10:31,1,0	1/1:17,0:17:18.43:125,18,0	1/1:9,3:12:7.34:87,7,0	1/1:12,3:15:9.72:112,10,0	0/1:13,0:13:4.06:43,0,4	1/1:3,0:3:6.12:48,6,0
chr10	36129789	.	A	AG	9122.48	PASS	AB=0.807;AC=54;AF=0.964;AN=56;BaseQRankSum=-2.976;DP=341;FS=1.527;HRun=2;HaplotypeScore=94.3548;InbreedingCoeff=-0.0443;MQ=78.39;MQ0=0;MQRankSum=-4.308;QD=26.75;ReadPosRankSum=2.563;VQSLOD=4.7720;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,17:19:51.14:570,51,0	1/1:2,2:4:9.01:96,9,0	0/1:8,4:11:54.14:167,0,54	0/1:16,3:19:47.96:241,0,48	1/1:2,8:10:24.05:262,24,0	1/1:2,5:7:18.05:221,18,0	1/1:8,10:18:37.64:425,38,0	1/1:1,7:8:24.05:281,24,0	1/1:2,11:13:36.07:393,36,0	1/1:2,7:9:23.43:255,23,0	1/1:1,5:6:15.04:168,15,0	1/1:0,13:13:36.11:451,36,0	1/1:3,13:16:39.07:443,39,0	1/1:3,9:12:33.07:381,33,0	1/1:2,8:10:29.45:332,29,0	1/1:1,9:10:26.28:275,26,0	1/1:5,14:19:56.12:606,56,0	1/1:1,12:13:33.10:406,33,0	1/1:2,3:6:16.45:153,16,0	1/1:5,7:12:20.73:217,21,0	1/1:1,20:21:42.58:493,43,0	1/1:1,7:8:12.02:124,12,0	1/1:3,12:15:33.08:385,33,0	1/1:1,14:15:39.11:456,39,0	1/1:3,9:12:30.08:340,30,0	1/1:3,12:15:40.29:437,40,0	1/1:4,11:15:41.82:428,42,0	1/1:1,2:3:9.03:116,9,0
chr10	36133862	.	ACACACCTACTCCAACAAGGC	A	1586.81	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.614;DP=837;FS=2.514;HRun=0;HaplotypeScore=386.4971;InbreedingCoeff=0.9008;MQ=55.85;MQ0=10;MQRankSum=-5.486;QD=36.90;ReadPosRankSum=-1.982;VQSLOD=1.2475;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:16,27:43:33.11:1681,33,0	0/0:12,0:12:21.06:0,21,1347	0/0:26,0:6:11.93:0,12,610	0/0:37,0:11:9.03:0,9,310	0/0:21,0:21:57.18:0,57,4231	0/0:23,0:23:51.18:0,51,3496	0/0:35,0:35:69.23:0,69,5946	0/0:28,0:27:36.12:0,36,1817	0/0:36,0:36:72.22:0,72,5783	0/0:32,0:32:75.25:0,75,5215	0/0:19,0:19:51.18:0,51,4070	0/0:45,0:45:99:0,105,8523	0/0:27,0:27:63.20:0,63,4722	0/0:30,0:30:78.27:0,78,6444	0/0:26,0:26:60.21:0,60,4844	0/0:38,0:38:84.29:0,84,6386	0/0:43,0:43:96.33:0,96,7742	0/0:26,0:26:69.19:0,69,4708	0/0:20,0:19:39.11:0,39,2526	0/0:23,0:23:45.15:0,45,3603	0/0:49,0:49:99:0,114,8657	0/0:23,0:23:60.21:0,60,4188	0/0:35,0:35:81.28:0,81,7142	0/0:43,0:43:99:0,105,8049	0/0:25,0:24:57.18:0,57,4552	0/0:26,0:26:66.22:0,66,5627	0/0:37,0:37:99:0,102,8218	0/0:9,0:9:15.02:0,15,1122
chr10	36134650	.	T	TGGCTTTGGCCACTTTTGCTGGGGAAGGTTA	171846.78	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=7.265;DP=858;FS=4.456;HRun=0;HaplotypeScore=588.8221;InbreedingCoeff=0.9995;MQ=69.47;MQ0=0;MQRankSum=-18.007;QD=245.85;ReadPosRankSum=6.392;VQSLOD=3.3945;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:43,4:53:99:13271,129,0	1/1:12,1:14:42.12:3791,42,0	0/0:34,0:34:93.28:0,93,4790	0/0:33,0:33:93.16:0,93,4527	1/1:30,3:35:90.22:6536,90,0	1/1:25,2:28:78.27:7636,78,0	1/1:20,0:20:60.21:6019,60,0	1/1:32,0:32:87.28:4976,87,0	1/1:29,0:29:84.25:8680,84,0	1/1:40,0:40:99:11913,111,0	1/1:25,0:25:69.23:5571,69,0	0/0:31,0:31:93.32:0,93,6042	1/1:32,4:42:99:11522,108,0	1/1:38,5:49:99:12740,129,0	1/1:33,3:40:90.31:9868,90,0	1/1:19,1:24:60.21:6358,60,0	1/1:27,0:27:69.19:5129,69,0	1/1:11,3:18:39.13:4394,39,0	1/1:33,0:33:93.25:7172,93,0	1/1:29,2:33:87.30:7147,87,0	1/1:18,0:18:35.98:2367,36,0	1/1:32,3:37:99:9783,102,0	0/0:33,0:33:84.24:0,84,4712	0/0:28,0:28:78.27:0,78,4807	1/1:25,0:25:63.22:5744,63,0	1/1:34,1:39:99:10101,114,0	1/1:25,2:28:78.27:8381,78,0	1/1:9,0:9:24.08:2748,24,0
chr10	36135288	.	TG	T	4479.73	PASS	AB=0.835;AC=51;AF=0.911;AN=56;BaseQRankSum=-4.020;DP=407;FS=10.782;HRun=3;HaplotypeScore=43.1231;InbreedingCoeff=0.1941;MQ=63.40;MQ0=40;MQRankSum=1.975;QD=11.40;ReadPosRankSum=0.030;VQSLOD=1.6026;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:11:14.77:118,15,0	1/1:8,0:6:1.17:33,1,0	0/1:41,4:21:99:145,0,105	0/1:41,3:18:15.50:110,0,15	1/1:7,0:7:12.31:87,12,0	1/1:16,0:15:38.24:233,38,0	1/1:9,0:8:23.80:171,24,0	0/1:6,7:9:0.98:110,0,1	1/1:8,0:7:17.72:123,18,0	1/1:17,0:16:28.55:236,29,0	1/1:9,0:7:13.76:118,14,0	1/1:14,0:11:29.69:209,30,0	1/1:9,0:8:17.89:137,18,0	1/1:8,0:7:9.70:70,10,0	1/1:6,0:4:8.90:63,9,0	1/1:6,0:5:14.83:99,15,0	1/1:25,0:23:56.48:398,56,0	1/1:21,0:17:44.70:326,45,0	1/1:12,0:12:20.92:212,21,0	1/1:12,0:10:26.77:192,27,0	1/1:13,0:11:26.69:192,27,0	1/1:9,0:8:17.83:133,18,0	0/0:5,8:13:4.42:0,4,15	1/1:17,0:14:38.38:252,38,0	1/1:8,0:7:6:54,6,0	1/1:6,13:16:31.94:258,32,0	1/1:17,0:14:38.33:253,38,0	1/1:7,0:6:17.96:145,18,0
chr10	36135290	.	GGTTTTTTTTTT	G	4073.79	PASS	AB=1.000;AC=46;AF=0.821;AN=56;BaseQRankSum=-2.717;DP=396;FS=6.694;HRun=0;HaplotypeScore=92.3870;InbreedingCoeff=-0.0082;MQ=63.13;MQ0=44;MQRankSum=3.742;QD=10.66;ReadPosRankSum=1.186;VQSLOD=1.2712;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:14,0:10:68.03:68,0,160	0/1:8,0:6:4.18:28,0,4	0/1:43,0:19:99:126,0,228	0/1:42,0:16:99:107,0,239	1/1:5,0:5:9.84:84,10,0	1/1:15,0:14:38.24:233,38,0	1/1:9,0:8:23.80:171,24,0	0/1:13,0:9:4.19:107,0,4	1/1:7,0:6:17.72:123,18,0	1/1:4,13:16:28.55:236,29,0	0/1:12,0:10:4.35:81,0,4	0/1:14,0:10:89.46:89,0,318	1/1:7,0:6:17.90:136,18,0	1/1:8,0:7:9.70:70,10,0	1/1:6,0:4:8.90:63,9,0	1/1:6,0:5:12.36:83,12,0	1/1:26,0:23:54.16:393,54,0	1/1:20,0:16:44.70:325,45,0	1/1:11,0:11:20.92:212,21,0	1/1:12,0:10:22.01:170,22,0	1/1:12,0:9:26.69:192,27,0	1/1:7,0:6:17.83:133,18,0	0/0:14,0:13:7.70:0,8,112	0/1:17,0:14:99:144,0,200	1/1:9,0:7:0.04:44,0,0	1/1:17,0:14:31.61:257,32,0	1/1:18,0:14:38.33:253,38,0	1/1:7,0:6:17.96:145,18,0
chr10	36136826	.	TAC	T	974.27	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.054;DP=657;FS=4.599;HRun=0;HaplotypeScore=78.8220;InbreedingCoeff=0.7971;MQ=65.30;MQ0=2;MQRankSum=0.348;QD=24.36;ReadPosRankSum=1.899;VQSLOD=4.3037;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,36:40:84.27:1069,84,0	0/0:7,0:7:15.05:0,15,248	0/0:22,0:12:0.97:0,1,265	0/0:25,0:20:24.87:0,25,304	0/0:25,1:26:31.05:0,31,1023	0/0:25,0:25:66.20:0,66,1075	0/0:27,0:27:78.20:0,78,1183	0/0:27,0:27:63.18:0,63,929	0/0:24,0:24:60.17:0,60,935	0/0:27,0:27:69.18:0,69,1079	0/0:19,0:19:48.10:0,48,735	0/0:12,0:12:27.09:0,27,434	0/0:18,0:18:48.16:0,48,800	0/0:17,0:17:42.14:0,42,691	0/0:27,0:27:66.19:0,66,1028	0/0:24,0:24:63.17:0,63,968	0/0:35,0:35:99:0,99,1529	0/0:24,0:24:69.20:0,69,1087	0/0:17,0:17:39.13:0,39,650	0/0:21,0:21:48.14:0,48,739	0/0:30,0:30:75.13:0,75,1128	0/0:23,0:23:66.21:0,66,1068	0/0:22,0:22:48.14:0,48,764	0/0:18,0:18:48.15:0,48,769	0/0:29,0:29:69.24:0,69,1139	0/0:36,0:36:96.27:0,96,1449	0/0:20,0:20:54.17:0,54,871	0/0:15,0:15:36.04:0,36,516
chr10	36138339	.	C	CA	12631.21	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=5.288;DP=579;FS=6.707;HRun=2;HaplotypeScore=134.1675;InbreedingCoeff=0.9986;MQ=73.85;MQ0=1;MQRankSum=-7.540;QD=26.10;ReadPosRankSum=3.644;VQSLOD=4.3694;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:25,3:27:40.28:392,40,0	1/1:3,6:9:23.72:244,24,0	0/0:28,0:26:33.56:0,34,474	0/0:18,0:18:24.68:0,25,312	1/1:26,0:26:77.07:520,77,0	1/1:5,16:21:60.57:645,61,0	1/1:3,21:24:57.16:655,57,0	1/1:11,16:27:75.06:734,75,0	1/1:20,0:20:53.11:345,53,0	1/1:9,13:22:57.04:595,57,0	1/1:2,13:15:42.11:466,42,0	0/0:16,0:16:34.28:0,34,430	1/1:3,13:16:47.13:483,47,0	1/1:6,14:20:51.02:537,51,0	1/1:2,20:22:63.15:688,63,0	1/1:17,0:16:47.07:311,47,0	1/1:18,0:18:52.33:310,52,0	1/1:5,17:22:63.10:687,63,0	1/1:1,11:12:36.08:388,36,0	1/1:8,19:27:72.56:768,73,0	1/1:10,14:24:57.07:601,57,0	1/1:7,21:28:80.72:788,81,0	0/0:12,0:12:30.07:0,30,355	0/0:21,0:21:57.13:0,57,664	1/1:5,20:24:68.91:708,69,0	1/1:6,15:21:63.09:660,63,0	1/1:6,25:31:78.17:843,78,0	1/1:2,7:9:26.98:266,27,0
chr10	36138341	.	AG	A	1635.42	PASS	AB=0.933;AC=9;AF=0.161;AN=56;BaseQRankSum=-7.496;DP=584;FS=7.576;HRun=10;HaplotypeScore=172.5761;InbreedingCoeff=0.9011;MQ=73.87;MQ0=1;MQRankSum=3.472;QD=15.00;ReadPosRankSum=2.773;VQSLOD=2.3936;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:30:37.50:0,38,209	0/0:8,0:9:22.37:0,22,106	0/1:26,2:26:1.06:1,0,405	0/0:20,0:20:12.75:0,13,291	1/1:4,22:26:65.97:571,66,0	0/0:21,0:21:50.04:0,50,226	0/0:23,0:23:55.39:0,55,255	0/0:27,0:27:56.99:0,57,257	1/1:3,16:19:44.99:391,45,0	0/0:20,0:21:47.05:0,47,216	0/0:13,0:17:34.03:0,34,167	0/0:16,1:18:18.86:0,19,396	0/0:16,0:16:41.79:0,42,190	0/0:18,0:18:44.29:0,44,201	0/0:21,0:21:58.57:0,59,269	1/1:2,16:18:41.99:365,42,0	1/1:0,18:18:53.99:469,54,0	0/0:21,0:23:49.78:0,50,226	0/0:13,0:13:32.12:0,32,143	0/0:27,0:27:55.73:0,56,253	0/0:23,0:23:36.62:0,37,172	0/0:27,0:28:69.54:0,70,320	0/0:14,1:15:9.99:0,10,316	0/0:19,0:19:54.13:0,54,588	0/0:24,0:23:60.78:0,61,272	0/0:21,0:21:41.60:0,42,190	0/0:25,0:31:72.57:0,73,335	0/0:9,0:9:22.35:0,22,105
chr10	36138345	.	G	GGT	13051.66	PASS	AB=1.000;AC=37;AF=0.661;AN=56;BaseQRankSum=0.107;DP=581;FS=0.700;HRun=0;HaplotypeScore=148.9989;InbreedingCoeff=0.9192;MQ=74.62;MQ0=1;MQRankSum=-7.939;QD=32.39;ReadPosRankSum=2.649;VQSLOD=6.6189;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:26:60.20:60,0,68	1/1:2,7:9:24.04:310,24,0	0/0:28,0:26:67.65:0,68,752	0/0:21,0:21:50.18:0,50,542	0/0:25,0:25:69.65:0,70,555	1/1:2,18:20:42.90:777,43,0	1/1:3,18:21:60.18:854,60,0	1/1:6,24:30:66.53:960,67,0	0/0:16,0:16:44.90:0,45,366	1/1:5,17:23:52.13:715,52,0	1/1:5,12:17:42.12:571,42,0	0/0:19,0:19:50.67:0,51,613	1/1:4,13:17:44.49:596,44,0	1/1:1,16:18:33.45:678,33,0	1/1:2,20:22:61.07:834,61,0	0/0:17,0:16:41.90:0,42,341	0/0:19,0:19:56.87:0,57,463	1/1:4,18:22:58.42:820,58,0	1/1:2,9:15:44.92:544,45,0	1/1:5,20:27:46.81:859,47,0	1/1:4,19:23:48.54:634,49,0	1/1:4,24:29:72:1024,72,0	0/0:14,0:14:39.09:0,39,525	0/0:19,0:19:57.14:0,57,812	1/1:3,22:25:52.46:860,52,0	1/1:5,15:20:23.60:627,24,0	1/1:3,23:27:75.24:1019,75,0	1/1:3,7:10:22.42:308,22,0
chr10	36138346	.	G	GT	738.55	PASS	AB=0.981;AC=28;AF=0.500;AN=56;BaseQRankSum=8.153;DP=582;FS=8.348;HRun=0;HaplotypeScore=179.2121;InbreedingCoeff=0.3799;MQ=73.84;MQ0=1;MQRankSum=-4.595;QD=1.97;ReadPosRankSum=5.183;VQSLOD=1.9653;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,1:28:27.93:0,28,170	0/1:9,0:9:10.54:11,0,15	0/0:28,0:26:74.61:0,75,763	0/0:20,0:20:48.42:0,48,456	0/0:24,0:24:65.46:0,65,442	1/1:22,0:22:16.55:75,17,0	1/1:20,0:20:19.08:93,19,0	0/1:29,0:29:47.94:48,0,78	0/0:16,0:16:44.34:0,44,290	0/1:23,0:23:47.07:51,0,47	1/1:17,0:18:10.01:36,10,0	0/0:20,0:20:47.87:0,48,589	0/1:15,0:16:5.05:32,0,5	1/1:18,0:18:6.72:53,7,0	1/1:22,0:22:1.83:44,2,0	0/0:16,0:15:41.38:0,41,270	0/0:19,0:19:56.21:0,56,373	1/1:22,0:22:19.88:76,20,0	0/1:15,1:16:14.23:14,0,23	1/1:25,0:25:0.94:57,1,0	1/1:23,0:23:30.37:92,30,0	1/1:28,0:28:13.78:82,14,0	0/0:15,0:15:39.06:0,39,481	0/0:20,0:20:57.13:0,57,751	0/1:26,1:26:30.45:37,0,30	0/1:20,0:20:30.40:30,0,40	1/1:26,1:27:25.18:86,25,0	0/1:10,0:10:8.40:18,0,8
chr10	36139127	.	G	GAAAA	8194.15	PASS	AB=0.859;AC=47;AF=0.839;AN=56;BaseQRankSum=-0.325;DP=594;FS=0.000;HRun=15;HaplotypeScore=135.3740;InbreedingCoeff=0.5219;MQ=72.80;MQ0=1;MQRankSum=-4.676;QD=15.85;ReadPosRankSum=-4.612;VQSLOD=1.0042;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:8,0:30:12.09:105,0,12	1/1:6,0:11:8.99:112,9,0	0/1:34,0:20:2.43:2,0,176	0/0:32,0:25:1.87:0,2,72	1/1:15,0:17:35.25:452,35,0	1/1:3,19:24:7.60:135,8,0	1/1:4,6:13:14.96:236,15,0	1/1:18,19:39:64.06:919,64,0	1/1:17,0:36:30.49:530,30,0	1/1:11,12:27:38.19:462,38,0	1/1:16,0:19:24:265,24,0	0/1:19,0:20:9.81:10,0,297	1/1:3,0:12:5.82:89,6,0	1/1:17,0:17:35.98:490,36,0	1/1:15,0:15:33.08:511,33,0	1/1:18,0:20:42.02:589,42,0	1/1:4,15:21:5.97:83,6,0	1/1:11,0:12:27.06:430,27,0	1/1:23,0:23:32.10:455,32,0	1/1:6,8:14:15.02:204,15,0	1/1:8,0:7:9.49:141,9,0	1/1:7,1:18:17.97:234,18,0	0/0:18,0:18:13.34:0,13,329	0/0:24,0:25:11.79:0,12,300	1/1:20,0:22:43.74:556,44,0	1/1:15,0:29:41.68:434,42,0	1/1:20,0:20:40.56:515,41,0	1/1:6,1:13:17.96:232,18,0
chr10	36140914	.	AACAC	A	127.95	PASS	AB=0.969;AC=17;AF=0.386;AN=44;BaseQRankSum=-2.113;DP=520;FS=2.333;HRun=0;HaplotypeScore=100.9326;InbreedingCoeff=-0.0517;MQ=66.64;MQ0=24;MQRankSum=0.497;QD=0.58;ReadPosRankSum=0.817;VQSLOD=2.0204;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:21:10.33:0,10,70	1/1:7,0:6:0.47:1,0,0	./.	./.	0/0:5,0:5:2.68:0,3,11	0/1:19,0:19:0.14:0,0,9	0/0:27,0:26:2.80:0,3,14	./.	0/1:17,0:16:0:0,0,0	0/1:18,0:16:12.64:29,0,13	1/1:12,0:11:3.01:45,3,0	0/0:19,0:19:7.33:0,7,48	0/1:14,0:14:9.14:9,0,33	1/1:15,0:15:0.47:1,0,0	0/1:11,1:13:17.95:65,0,18	1/1:14,0:14:0.41:1,0,0	0/0:31,0:29:5.92:0,6,40	0/1:20,4:22:22.22:39,0,22	0/0:11,0:11:2.58:0,3,22	./.	0/1:51,0:50:18.28:18,0,34	0/1:10,0:9:24.05:24,0,47	./.	0/0:31,0:30:32.65:0,33,440	0/1:6,0:5:5.42:5,0,61	0/0:19,0:18:7.64:0,8,37	0/0:10,0:10:0.47:0,0,2	./.
chr10	36142270	.	AT	A	1991.62	PASS	AB=0.918;AC=13;AF=0.232;AN=56;BaseQRankSum=6.173;DP=570;FS=1.832;HRun=11;HaplotypeScore=69.1472;InbreedingCoeff=0.7501;MQ=75.23;MQ0=0;MQRankSum=1.370;QD=12.61;ReadPosRankSum=1.209;VQSLOD=3.7360;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,26:29:81.98:652,82,0	0/0:9,0:9:24.03:0,24,239	0/1:17,2:15:16.15:16,0,69	0/1:16,0:14:5.75:6,0,74	1/1:2,18:20:53.92:443,54,0	0/0:17,1:18:23.48:0,23,455	0/0:17,1:18:17.47:0,17,391	0/0:35,1:36:56.54:0,57,793	1/1:0,19:19:53.94:443,54,0	0/0:23,0:23:57.13:0,57,594	0/0:21,2:23:13.86:0,14,552	0/0:21,0:21:54.14:0,54,575	0/0:26,1:27:45.26:0,45,659	0/0:11,0:11:24.06:0,24,255	0/0:23,1:24:32.51:0,33,551	1/1:3,9:12:23.83:197,24,0	1/1:7,19:26:24.93:411,25,0	0/0:24,0:24:69.17:0,69,736	0/0:23,1:24:29.92:0,30,496	0/0:27,0:27:69.17:0,69,729	0/0:18,0:18:36.09:0,36,384	0/0:17,0:17:39.10:0,39,416	0/0:18,0:18:45.11:0,45,480	0/1:14,3:17:1.17:1,0,400	0/0:18,0:19:44.94:0,45,459	0/0:23,0:23:60.13:0,60,628	0/0:21,0:21:62.96:0,63,637	0/0:11,0:11:33.05:0,33,341
chr10	36143083	.	G	GA	7870.45	PASS	AB=0.786;AC=36;AF=0.643;AN=56;BaseQRankSum=-11.290;DP=642;FS=11.459;HRun=11;HaplotypeScore=80.4566;InbreedingCoeff=0.7938;MQ=73.86;MQ0=0;MQRankSum=0.542;QD=18.09;ReadPosRankSum=-0.615;VQSLOD=4.8015;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:45:80.39:0,80,247	1/1:1,5:6:18:172,18,0	0/0:12,0:12:14.03:0,14,90	0/1:17,0:18:18.30:18,0,40	0/0:30,0:30:68.68:0,69,533	1/1:5,19:26:17.20:502,17,0	1/1:2,17:20:48.05:475,48,0	1/1:8,17:26:7.53:410,8,0	0/0:20,0:20:50.77:0,51,393	1/1:12,19:32:59.76:563,60,0	1/1:4,22:26:53.26:605,53,0	0/0:20,0:20:50.78:0,51,394	1/1:2,20:22:42.08:426,42,0	0/1:4,12:16:10.40:268,0,10	1/1:6,15:21:39.08:396,39,0	0/0:21,0:22:54.04:0,54,404	0/0:21,0:22:52.81:0,53,401	1/1:1,15:16:36.07:365,36,0	1/1:8,16:26:47.75:446,48,0	1/1:8,29:38:76.42:718,76,0	1/1:9,7:17:14.86:136,15,0	1/1:5,15:22:7.31:408,7,0	0/0:20,0:21:52.83:0,53,401	0/0:13,1:15:4.46:0,4,208	1/1:7,19:26:10.65:471,11,0	1/1:4,14:21:37.91:388,38,0	1/1:7,22:31:46.34:600,46,0	1/1:4,20:25:50.94:502,51,0
chr10	36143429	.	T	TTCTCTC	3443.17	PASS	AB=0.885;AC=43;AF=0.827;AN=52;BaseQRankSum=-0.977;DP=627;FS=4.131;HRun=0;HaplotypeScore=153.6129;InbreedingCoeff=0.4753;MQ=69.41;MQ0=13;MQRankSum=-2.331;QD=6.63;ReadPosRankSum=-1.670;VQSLOD=2.5226;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:31,0:33:32.83:542,33,0	1/1:9,0:9:6.01:94,6,0	0/1:18,0:12:0:0,0,0	./.	1/1:12,0:22:3.01:63,3,0	1/1:15,3:21:9.03:174,9,0	1/1:13,3:22:9.03:174,9,0	1/1:38,0:37:11.88:89,12,0	1/1:25,0:23:15:152,15,0	1/1:29,0:29:21.04:309,21,0	1/1:14,6:24:3.01:49,3,0	0/0:15,0:18:18.04:0,18,308	1/1:16,7:27:8.88:153,9,0	1/1:13,1:16:8.65:170,9,0	0/1:10,0:21:27.13:67,0,27	1/1:20,1:31:6.02:168,6,0	1/1:23,0:22:11.98:152,12,0	1/1:12,0:11:10.83:119,11,0	1/1:17,0:17:18.32:227,18,0	1/1:18,0:18:11.95:95,12,0	1/1:19,0:21:9:115,9,0	0/1:14,0:14:5.62:6,0,7	0/0:13,0:14:5.80:0,6,56	0/0:31,0:32:36.86:0,37,991	1/1:24,0:23:6.01:89,6,0	1/1:18,0:20:7.11:270,7,0	1/1:23,0:27:12.21:166,12,0	./.
chr10	36143904	.	GA	G	5936.76	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=12.972;DP=738;FS=0.000;HRun=4;HaplotypeScore=67.9694;InbreedingCoeff=0.9979;MQ=82.48;MQ0=0;MQRankSum=-2.702;QD=32.09;ReadPosRankSum=4.038;VQSLOD=5.2424;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,55:56:99:1872,156,0	0/0:7,0:7:18.06:0,18,252	0/0:26,0:26:66.17:0,66,886	0/0:19,0:19:52.97:0,53,685	1/1:2,27:29:75.23:897,75,0	0/0:20,0:20:60.19:0,60,822	0/0:37,0:37:99:0,108,1495	0/0:26,0:26:63.21:0,63,878	1/1:0,43:43:99:1404,117,0	0/0:26,0:26:75.25:0,75,1048	0/0:20,0:20:57.19:0,57,782	0/0:27,0:27:81.27:0,81,1133	0/0:32,0:32:96.30:0,96,1311	0/0:27,0:27:81.26:0,81,1106	0/0:30,0:30:84.27:0,84,1146	1/1:0,24:24:54.17:648,54,0	1/1:1,32:33:93.29:1116,93,0	0/0:27,0:27:81.23:0,81,1111	0/0:21,0:21:54.18:0,54,753	0/0:17,0:17:51.16:0,51,698	0/0:28,0:28:78.25:0,78,1073	0/0:28,0:28:81.25:0,81,1101	0/0:22,0:22:66.21:0,66,907	0/0:32,0:32:96.30:0,96,1325	0/0:22,0:22:63.20:0,63,852	0/0:33,0:33:93.30:0,93,1286	0/0:17,0:17:51.17:0,51,709	0/0:9,0:9:27.09:0,27,378
chr10	36144459	.	T	TAAA	14854.19	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-6.663;DP=675;FS=7.553;HRun=10;HaplotypeScore=101.5976;InbreedingCoeff=0.9779;MQ=69.96;MQ0=1;MQRankSum=-1.733;QD=35.37;ReadPosRankSum=-5.303;VQSLOD=2.8301;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:35:89.97:0,90,1125	1/1:1,4:8:21.01:299,21,0	0/0:21,0:23:26.47:0,26,385	0/0:13,0:13:16.82:0,17,186	0/0:20,0:21:63.10:0,63,724	1/1:2,17:22:57.15:990,57,0	1/1:3,18:26:54.14:961,54,0	1/1:13,23:41:88.41:1471,88,0	0/0:26,0:26:63.16:0,63,760	1/1:10,17:31:69.15:1106,69,0	1/1:3,8:16:35.80:560,36,0	0/0:24,0:24:63.14:0,63,766	1/1:4,13:19:34.47:618,34,0	1/1:6,13:22:5.46:566,5,0	1/1:3,23:29:77.23:1338,77,0	0/0:22,0:22:57.12:0,57,682	0/0:31,0:36:82.34:0,82,1032	1/1:2,24:32:71.99:1230,72,0	1/1:8,8:20:42.07:669,42,0	1/1:7,13:21:45.12:769,45,0	1/1:9,18:30:34:578,34,0	1/1:5,20:27:72.20:1238,72,0	0/0:11,0:11:27.08:0,27,327	0/0:43,0:43:99:0,111,1350	1/1:5,14:21:36.12:655,36,0	1/1:12,15:27:58.64:910,59,0	1/1:2,14:18:36.11:644,36,0	1/1:1,6:8:15.03:254,15,0
chr10	36146796	.	T	TA	6848.89	PASS	AB=1.000;AC=37;AF=0.661;AN=56;BaseQRankSum=-9.104;DP=538;FS=2.266;HRun=10;HaplotypeScore=65.9130;InbreedingCoeff=0.9162;MQ=76.50;MQ0=2;MQRankSum=-0.832;QD=19.29;ReadPosRankSum=-2.006;VQSLOD=5.0767;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:86.87:0,87,711	1/1:3,2:5:3.01:32,3,0	0/1:20,0:16:3.31:3,0,105	0/0:18,0:16:26.68:0,27,201	0/0:29,0:30:76.93:0,77,617	1/1:2,22:24:54.14:576,54,0	1/1:4,14:18:42.11:447,42,0	1/1:7,23:31:68.97:700,69,0	0/0:15,0:15:35.94:0,36,294	1/1:4,17:21:51.10:528,51,0	1/1:7,12:19:33.04:340,33,0	0/0:15,0:15:41.95:0,42,345	1/1:5,13:18:35.57:354,36,0	1/1:3,13:16:39.10:413,39,0	1/1:6,7:13:18.05:192,18,0	0/0:11,0:12:28.97:0,29,223	0/0:20,0:22:49:0,49,381	1/1:2,17:19:36.09:383,36,0	1/1:7,15:23:50.61:478,51,0	1/1:2,18:20:48.04:478,48,0	1/1:5,6:11:15.04:160,15,0	1/1:1,11:12:30.55:321,31,0	0/0:22,0:22:33.09:0,33,370	0/0:14,0:14:29.95:0,30,246	1/1:3,20:24:56.97:587,57,0	1/1:3,3:22:51.66:298,52,0	1/1:4,19:22:39.10:416,39,0	1/1:3,0:16:28.48:143,28,0
chr10	36147482	.	ATT	A	13629.97	PASS	AB=0.833;AC=47;AF=0.839;AN=56;BaseQRankSum=3.449;DP=612;FS=7.739;HRun=11;HaplotypeScore=81.7161;InbreedingCoeff=0.8506;MQ=69.99;MQ0=1;MQRankSum=-2.367;QD=25.43;ReadPosRankSum=3.378;VQSLOD=4.6640;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,33:34:99:1041,99,0	1/1:0,7:7:18.04:192,18,0	0/1:8,1:10:26.63:27,0,192	0/0:9,0:9:9.36:0,9,125	1/1:2,23:25:60.10:639,60,0	1/1:2,17:19:48.12:511,48,0	1/1:2,10:13:32.81:331,33,0	1/1:7,21:29:57.06:652,57,0	1/1:1,13:14:39.10:415,39,0	1/1:4,18:22:54.11:575,54,0	1/1:2,18:21:39.01:470,39,0	0/0:16,0:16:45.13:0,45,648	1/1:3,15:18:42.10:447,42,0	1/1:2,17:20:42.06:502,42,0	1/1:3,25:27:63.15:670,63,0	1/1:2,24:27:60.10:694,60,0	1/1:3,26:29:78.17:830,78,0	1/1:0,28:29:78.19:830,78,0	1/1:3,12:15:36.05:383,36,0	1/1:5,27:32:75.16:798,75,0	1/1:2,19:21:51.12:543,51,0	1/1:2,25:27:72.17:766,72,0	0/0:27,0:25:63.69:0,64,970	0/0:21,0:24:68.20:0,68,965	1/1:8,22:30:54.08:575,54,0	1/1:2,21:24:57.10:662,57,0	1/1:5,25:30:69.14:734,69,0	1/1:0,11:12:27.02:343,27,0
chr10	36165335	.	CCG	C	36.91	PASS	AB=0.959;AC=7;AF=0.125;AN=56;BaseQRankSum=4.467;DP=384;FS=13.820;HRun=0;HaplotypeScore=133.8773;InbreedingCoeff=0.1360;MQ=42.30;MQ0=5;MQRankSum=-4.552;QD=0.59;ReadPosRankSum=2.064;VQSLOD=1.5271;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,1:1:3.01:40,3,0	0/0:4,0:4:12.04:0,12,140	0/0:11,0:5:7.37:0,7,105	0/1:4,1:1:0:0,0,0	0/0:3,0:3:9.03:0,9,101	0/0:13,0:13:4.92:0,5,82	0/0:25,0:25:34.14:0,34,381	0/0:11,0:7:21.04:0,21,217	0/0:6,0:6:8.75:0,9,85	0/0:23,0:21:20.84:0,21,352	0/0:7,0:7:12.08:0,12,205	0/0:29,4:32:53.35:0,53,538	0/0:25,0:25:48.97:0,49,516	0/0:21,3:24:29.50:0,30,318	0/0:22,2:24:32.67:0,33,360	0/0:11,0:11:30.06:0,30,358	0/0:5,0:5:9.03:0,9,113	0/1:16,0:15:36.72:37,0,132	0/1:7,0:5:16.11:16,0,94	0/0:13,0:13:17.71:0,18,186	0/0:28,0:28:47.47:0,47,504	0/0:12,0:12:27.52:0,28,297	0/0:12,0:12:23.15:0,23,226	0/0:19,1:20:15.01:0,15,160	0/0:10,0:10:30.05:0,30,327	0/1:23,1:24:49.73:50,0,566	0/1:10,0:10:9.55:10,0,91	0/0:1,0:1:3.01:0,3,35
chr10	36165376	.	G	GCA	628.38	PASS	AB=0.731;AC=8;AF=0.143;AN=56;BaseQRankSum=8.607;DP=828;FS=15.974;HRun=0;HaplotypeScore=224.2183;InbreedingCoeff=0.6658;MQ=41.39;MQ0=72;MQRankSum=-6.579;QD=14.96;ReadPosRankSum=1.101;VQSLOD=1.7237;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:9,2:11:0.20:13,0,0	0/0:10,0:10:26.92:0,27,290	0/0:41,0:3:6.01:0,6,59	0/0:48,0:8:22.08:0,22,219	1/1:1,4:5:8.84:102,9,0	0/0:18,0:18:17.99:0,18,196	0/0:51,0:50:99:0,117,1439	0/0:25,0:15:39.12:0,39,488	1/1:1,5:6:9.03:138,9,0	0/0:44,0:42:90.43:0,90,1179	0/0:19,0:18:25.36:0,25,301	0/0:55,0:55:97.59:0,98,1106	0/0:27,0:27:1.01:0,1,539	0/0:39,0:39:87.45:0,87,1038	0/0:55,0:55:80.86:0,81,1039	1/1:3,9:12:6.08:324,6,0	0/1:3,5:8:8.33:186,0,8	0/0:30,0:29:52.44:0,52,762	0/0:17,0:6:18.06:0,18,232	0/0:25,0:24:54:0,54,635	0/0:80,0:74:99:0,183,2269	0/0:22,0:22:30.40:0,30,400	0/0:29,0:29:57.97:0,58,690	0/0:36,0:34:55.21:0,55,637	0/0:29,0:29:60.13:0,60,720	0/0:50,0:49:41.22:0,41,1300	0/0:26,0:26:31.03:0,31,617	0/0:9,0:9:20.58:0,21,269
chr10	36165414	.	G	GCA	223.10	PASS	AB=0.775;AC=8;AF=0.143;AN=56;BaseQRankSum=7.638;DP=1037;FS=31.699;HRun=0;HaplotypeScore=275.2596;InbreedingCoeff=0.7439;MQ=44.93;MQ0=91;MQRankSum=-5.540;QD=3.38;ReadPosRankSum=-2.500;VQSLOD=1.4206;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:15,3:18:0.77:11,0,1	0/0:14,0:14:30.06:0,30,366	0/0:35,0:2:2.37:0,2,8	0/0:49,0:6:12.01:0,12,152	0/1:5,4:8:0.01:0,0,0	0/0:23,0:23:68.76:0,69,657	0/0:57,0:57:99:0,132,1559	0/0:36,0:15:33.11:0,33,422	1/1:3,6:9:2.86:18,3,0	0/0:70,0:66:99:0,134,1883	0/0:29,0:28:58.81:0,59,623	0/0:50,0:50:95.72:0,96,1036	0/0:35,0:35:62.86:0,63,710	0/0:53,0:52:99:0,114,1206	0/0:55,0:55:99:0,127,1339	1/1:9,8:17:5.80:87,6,0	1/1:13,0:13:17.99:234,18,0	0/0:35,0:34:41.82:0,42,939	0/0:23,0:15:42.13:0,42,535	0/0:36,0:36:47.93:0,48,956	0/0:116,0:109:99:0,279,3365	0/0:35,0:35:50.47:0,50,632	0/0:34,0:34:84.04:0,84,934	0/0:50,0:48:99:0,106,1150	0/0:41,0:41:67.34:0,67,952	0/0:53,0:52:93.61:0,94,1641	0/0:28,0:27:54.13:0,54,690	0/0:12,0:11:30.10:0,30,385
chr10	36165452	.	G	GCA	477.66	PASS	AB=0.751;AC=6;AF=0.107;AN=56;BaseQRankSum=7.006;DP=1079;FS=28.544;HRun=0;HaplotypeScore=266.0448;InbreedingCoeff=0.6660;MQ=46.53;MQ0=38;MQRankSum=-6.758;QD=7.46;ReadPosRankSum=-2.233;VQSLOD=1.3331;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:9,11:20:2.43:77,0,2	0/0:14,0:14:36:0,36,430	0/0:47,0:10:27.09:0,27,349	0/0:52,0:15:36.09:0,36,444	0/0:1,8:9:0:0,0,0	0/0:24,0:23:38.98:0,39,465	0/0:63,0:63:99:0,151,1901	0/0:47,0:41:99:0,107,1339	1/1:1,15:16:21.03:325,21,0	0/0:71,0:64:99:0,153,1892	0/0:32,0:32:56.91:0,57,743	0/0:50,0:50:74.99:0,75,960	0/0:27,0:27:72.23:0,72,933	0/0:47,0:45:79.53:0,80,1049	0/0:50,0:50:66.21:0,66,857	1/1:2,14:16:9.03:137,9,0	0/1:10,2:12:67.31:68,0,67	0/0:41,0:41:72.78:0,73,1288	0/0:23,0:19:45.11:0,45,556	0/0:32,0:31:72.20:0,72,933	0/0:128,0:123:99:0,268,3403	0/0:38,0:38:37.83:0,38,627	0/0:30,0:30:69.63:0,70,965	0/0:49,0:48:99:0,99,1281	0/0:41,0:41:77.82:0,78,1013	0/0:55,0:54:99:0,138,1729	0/0:31,0:30:62.07:0,62,720	0/0:12,0:11:26.98:0,27,327
chr10	36165458	.	ACACT	A	217.67	PASS	AB=0.921;AC=4;AF=0.071;AN=56;BaseQRankSum=7.119;DP=1076;FS=19.645;HRun=0;HaplotypeScore=291.5712;InbreedingCoeff=0.1013;MQ=46.79;MQ0=23;MQRankSum=-5.288;QD=3.46;ReadPosRankSum=-2.945;VQSLOD=0.8898;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:21,0:21:7.92:8,0,42	0/0:13,0:13:36.04:0,36,844	0/0:43,0:10:30.02:0,30,630	0/0:52,0:15:44.88:0,45,945	0/1:11,0:11:0:0,0,0	0/0:25,0:24:44.98:0,45,1017	0/0:60,0:60:99:0,159,3974	0/0:48,0:45:99:0,124,3113	0/0:16,0:16:21.32:0,21,294	0/0:67,0:63:99:0,144,3722	0/0:32,0:32:57.90:0,58,1535	0/0:53,0:53:80.97:0,81,1931	0/0:26,0:26:75.20:0,75,1868	0/0:49,0:47:80.61:0,81,2270	0/0:47,0:47:68.35:0,68,1774	0/1:18,0:18:18.73:19,0,79	0/1:7,6:13:47.61:285,0,48	0/0:42,0:42:94.83:0,95,2770	0/0:22,0:17:51.10:0,51,1158	0/0:31,0:29:76.03:0,76,1941	0/0:128,1:124:99:0,295,7388	0/0:37,0:37:55.22:0,55,1298	0/0:31,0:31:80.93:0,81,1963	0/0:49,0:48:99:0,102,2575	0/0:42,0:42:85.79:0,86,2094	0/0:56,0:54:99:0,147,3532	0/0:30,0:29:67.04:0,67,1324	0/0:11,0:11:18.04:0,18,623
chr10	36165489	.	C	CAT	566.14	PASS	AB=0.800;AC=5;AF=0.089;AN=56;BaseQRankSum=6.272;DP=1108;FS=20.638;HRun=0;HaplotypeScore=319.5563;InbreedingCoeff=0.6737;MQ=48.25;MQ0=28;MQRankSum=-4.031;QD=8.33;ReadPosRankSum=-2.525;VQSLOD=1.8454;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:12,13:25:2.96:0,3,20	0/0:12,0:12:29.65:0,30,414	0/0:33,0:9:17.18:0,17,266	0/0:54,0:11:25.40:0,25,248	0/0:7,12:19:1.24:0,1,3	0/0:21,0:20:39.08:0,39,529	0/0:60,0:60:99:0,144,2025	0/0:43,0:39:99:0,114,1603	1/1:9,15:24:23.57:361,24,0	0/0:66,0:63:99:0,154,2220	0/0:27,0:26:42.09:0,42,576	0/0:58,0:58:99:0,117,1653	0/0:30,0:30:69.13:0,69,982	0/0:51,0:50:99:0,102,1495	0/0:44,0:44:72.17:0,72,1007	1/1:8,16:24:11.84:197,12,0	0/1:15,5:19:46.77:133,0,47	0/0:45,0:44:99:0,111,1697	0/0:28,0:18:51.04:0,51,706	0/0:39,0:36:95.86:0,96,1282	0/0:128,0:126:99:0,297,4249	0/0:41,0:41:62.42:0,62,857	0/0:27,0:27:66.18:0,66,975	0/0:57,0:57:99:0,120,1754	0/0:43,0:43:93.11:0,93,1360	0/0:51,0:49:99:0,141,1981	0/0:30,0:29:63.02:0,63,875	0/0:7,0:7:21:0,21,270
chr10	36165528	.	G	GCA	25591.04	PASS	AB=0.699;AC=45;AF=0.804;AN=56;BaseQRankSum=-6.354;DP=1085;FS=1.124;HRun=0;HaplotypeScore=237.8481;InbreedingCoeff=0.7102;MQ=49.67;MQ0=24;MQRankSum=0.695;QD=29.55;ReadPosRankSum=-0.809;VQSLOD=4.6585;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,24:34:23.18:400,23,0	1/1:0,4:5:12.04:191,12,0	0/0:61,0:17:29.33:0,29,292	0/1:66,0:15:0.35:0,0,224	1/1:3,13:16:2.26:50,2,0	1/1:3,15:17:33.03:550,33,0	1/1:3,40:44:87.28:1468,87,0	1/1:10,31:37:87.30:1439,87,0	1/1:4,18:22:26.48:439,26,0	1/1:27,38:63:99:2372,144,0	1/1:7,6:13:24.08:384,24,0	0/0:70,0:70:99:0,153,1919	1/1:5,33:39:90.09:1472,90,0	1/1:16,33:47:92.68:1510,93,0	1/1:15,26:42:87.20:1427,87,0	1/1:10,19:29:26.85:418,27,0	1/1:10,12:22:35.95:569,36,0	1/1:14,23:36:9.02:1210,9,0	0/1:5,13:17:13.07:565,0,13	1/1:9,23:32:90.14:1495,90,0	1/1:44,82:122:99:4315,261,0	1/1:11,18:29:48.13:757,48,0	0/0:23,0:22:36.02:0,36,418	0/0:64,0:64:99:0,147,1862	1/1:12,20:32:66.21:1081,66,0	1/1:10,40:49:99:2048,111,0	1/1:7,16:22:54.18:909,54,0	0/1:1,12:13:2.49:520,0,2
chr10	36165566	.	GCA	G	2306.96	PASS	AB=0.944;AC=11;AF=0.196;AN=56;BaseQRankSum=6.662;DP=1156;FS=9.317;HRun=0;HaplotypeScore=304.3684;InbreedingCoeff=0.6782;MQ=51.66;MQ0=35;MQRankSum=-3.778;QD=12.21;ReadPosRankSum=-1.564;VQSLOD=1.9877;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,1:44:22.68:0,23,891	0/0:8,0:8:21.07:0,21,343	0/0:59,0:15:31.41:0,31,343	0/0:62,0:14:25.91:0,26,284	1/1:7,15:22:26.86:326,27,0	0/0:17,1:18:41.88:0,42,662	0/1:39,1:39:4.84:5,0,905	0/0:69,0:69:99:0,162,2448	1/1:10,19:29:57.08:672,57,0	0/0:49,1:49:83.09:0,83,1736	0/0:14,0:14:27.09:0,27,439	0/0:62,1:63:99:0,125,2482	0/0:37,2:39:30.60:0,31,1424	0/0:48,2:49:39.25:0,39,1656	0/0:56,2:57:97.92:0,98,2055	1/1:9,24:33:69.20:838,69,0	1/1:9,21:30:51.03:591,51,0	0/0:32,1:31:28.47:0,28,906	0/0:37,0:27:24.31:0,24,723	0/0:28,0:28:60.14:0,60,912	0/0:124,2:121:99:0,216,3913	0/0:31,1:32:53.98:0,54,802	0/1:22,0:21:0.86:1,0,495	0/0:72,4:75:99:0,109,2771	0/0:29,1:30:10.14:0,10,896	0/0:50,2:52:57.78:0,58,1786	0/0:18,0:17:1.98:0,2,553	0/1:10,2:12:38.24:38,0,455
chr10	36165678	.	CACACACAGACACACACAG	C	5008.24	PASS	AB=0.992;AC=26;AF=0.481;AN=54;BaseQRankSum=-4.004;DP=1039;FS=0.398;HRun=0;HaplotypeScore=385.8035;InbreedingCoeff=0.0679;MQ=49.39;MQ0=49;MQRankSum=0.256;QD=6.61;ReadPosRankSum=0.077;VQSLOD=2.3761;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:43,2:43:18.06:354,18,0	1/1:8,0:8:3.01:33,3,0	0/0:31,0:10:2.98:0,3,22	./.	1/1:19,3:19:18.06:341,18,0	0/1:16,0:15:72.60:73,0,191	0/1:30,0:27:15.78:216,0,16	1/1:57,0:42:8.93:348,9,0	0/1:33,4:37:36.17:310,0,36	0/1:71,0:58:99:519,0,562	0/0:30,0:26:2.61:0,3,33	0/0:57,0:57:99:0,138,7280	0/1:31,0:30:99:154,0,449	1/1:59,0:59:3.31:12,3,0	0/1:36,0:35:99:206,0,320	1/1:36,4:40:27.84:514,28,0	1/1:21,3:24:17.65:498,18,0	0/1:27,0:27:99:184,0,335	0/1:33,0:24:99:155,0,356	0/1:28,0:22:0:0,0,0	0/1:116,0:108:99:732,0,514	0/1:37,0:33:0:0,0,0	0/0:22,0:20:38.71:0,39,2018	0/0:62,0:62:99:0,120,5990	0/0:15,0:15:6.02:0,6,116	0/1:41,0:36:99:360,0,508	0/0:21,0:20:8.47:0,8,101	0/0:17,0:16:9.03:0,9,134
chr10	36165688	.	CACACACAG	C	15141.95	PASS	AB=0.596;AC=42;AF=0.778;AN=54;BaseQRankSum=2.982;DP=1020;FS=6.250;HRun=0;HaplotypeScore=229.9696;InbreedingCoeff=0.7034;MQ=48.98;MQ0=50;MQRankSum=0.119;QD=18.69;ReadPosRankSum=-2.566;VQSLOD=2.7464;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:48,0:46:34.03:396,34,0	1/1:2,6:8:3.01:52,3,0	0/0:21,0:6:2.98:0,3,22	./.	1/1:25,0:21:20.56:305,21,0	1/1:18,2:19:33.11:659,33,0	1/1:25,2:24:33.07:532,33,0	1/1:52,0:35:10.74:541,11,0	1/1:32,0:32:0.89:275,1,0	1/1:25,38:50:22.26:1781,22,0	0/0:9,22:27:3.01:0,3,34	0/0:54,0:54:99:0,144,4533	1/1:27,11:37:82.02:1628,82,0	1/1:9,46:55:2.66:11,3,0	1/1:27,11:37:63.20:1180,63,0	1/1:44,0:44:37.37:483,37,0	1/1:23,0:23:24.44:388,24,0	1/1:24,1:25:42.52:815,43,0	1/1:9,17:22:34.07:985,34,0	0/1:10,16:21:0:0,0,0	1/1:123,2:118:99:2650,119,0	0/1:9,26:31:0:0,0,0	0/0:22,0:20:41.72:0,42,1324	0/0:67,0:67:99:0,141,4003	1/1:16,0:16:6.02:152,6,0	1/1:35,8:37:74.67:1832,75,0	1/1:3,19:22:11.84:306,12,0	1/1:6,13:18:9.03:171,9,0
chr10	36165696	.	G	GAC	13420.33	PASS	AB=0.972;AC=41;AF=0.788;AN=52;BaseQRankSum=5.580;DP=1022;FS=2.622;HRun=0;HaplotypeScore=177.3480;InbreedingCoeff=0.7139;MQ=48.86;MQ0=48;MQRankSum=-1.596;QD=16.94;ReadPosRankSum=-5.749;VQSLOD=3.7875;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:37,12:48:40.05:486,40,0	1/1:8,0:8:3.01:52,3,0	0/0:8,0:2:2.98:0,3,22	./.	1/1:19,4:19:20.56:304,21,0	1/1:10,7:16:33.11:537,33,0	1/1:22,8:27:45.08:646,45,0	1/1:34,27:44:42.86:978,43,0	1/1:29,4:33:6.40:340,6,0	1/1:64,0:50:2.36:1093,2,0	0/0:31,0:27:2.98:0,3,33	0/0:59,0:59:99:0,159,2075	1/1:28,9:37:84.24:1160,84,0	1/1:51,0:51:2.68:11,3,0	1/1:31,10:40:72.20:1115,72,0	1/1:42,3:46:39.89:549,40,0	1/1:18,5:23:27.14:457,27,0	1/1:16,11:27:56.67:821,57,0	1/1:26,0:22:20.01:517,20,0	./.	1/1:73,44:112:99:2588,134,0	0/1:34,1:31:0:0,0,0	0/0:24,0:22:50.73:0,51,612	0/0:67,0:68:99:0,150,1913	1/1:1,14:15:6.02:100,6,0	1/1:39,10:42:94.45:1466,94,0	1/1:22,0:21:13.93:144,14,0	1/1:17,0:16:6.88:58,7,0
chr10	36165751	.	GCA	G	3570.87	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=10.655;DP=1088;FS=2.836;HRun=0;HaplotypeScore=223.2543;InbreedingCoeff=0.9544;MQ=54.16;MQ0=3;MQRankSum=3.651;QD=16.69;ReadPosRankSum=5.265;VQSLOD=3.5073;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,59:68:99:1238,102,0	0/0:6,0:6:12.03:0,12,139	0/0:30,0:14:31.06:0,31,359	0/0:38,0:21:48.12:0,48,718	1/1:3,17:20:12.04:146,12,0	0/0:21,0:21:54.15:0,54,594	0/0:28,0:28:75.18:0,75,814	0/0:48,0:48:99:0,126,1239	1/1:11,36:47:75.11:890,75,0	0/0:61,0:60:99:0,165,1625	0/0:29,0:28:51.08:0,51,587	0/0:55,0:55:99:0,139,2317	0/0:47,0:47:99:0,105,1133	0/0:52,0:52:78.20:0,78,849	0/0:55,0:55:99:0,126,1364	1/1:13,34:47:59.98:729,60,0	1/1:10,22:32:4.84:568,5,0	0/0:33,0:33:64.68:0,65,781	0/0:33,0:31:75.14:0,75,802	0/0:26,0:26:45.12:0,45,496	0/0:106,0:106:99:0,228,2464	0/0:29,0:29:48.13:0,48,526	0/0:29,0:29:64.23:0,64,1052	0/0:56,0:56:99:0,141,2385	0/0:16,0:16:30.08:0,30,320	0/0:40,0:40:99:0,114,1114	0/0:21,0:20:32.72:0,33,372	0/0:14,0:14:36.02:0,36,394
chr10	36165760	.	TAC	T	3612.10	PASS	AB=0.933;AC=11;AF=0.196;AN=56;BaseQRankSum=11.694;DP=1100;FS=1.247;HRun=0;HaplotypeScore=213.5579;InbreedingCoeff=0.9003;MQ=54.77;MQ0=4;MQRankSum=-1.159;QD=14.86;ReadPosRankSum=6.197;VQSLOD=3.5756;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:69,0:69:99:1236,102,0	0/0:7,0:7:15.05:0,15,239	0/0:34,1:13:29.93:0,30,422	0/0:38,0:24:59.59:0,60,820	1/1:23,0:23:11.51:145,12,0	0/0:23,0:23:54.18:0,54,902	0/0:28,0:28:72.23:0,72,1157	0/0:62,0:62:99:0,153,2419	1/1:47,0:47:74.60:912,75,0	0/0:62,0:60:99:0,148,2453	0/0:26,0:26:57.11:0,57,957	0/0:51,1:52:99:0,116,1881	0/0:45,1:46:99:0,108,1764	0/0:46,0:46:84.28:0,84,1394	0/0:57,0:57:99:0,147,2348	1/1:47,0:47:60.02:726,60,0	1/1:29,0:28:23.64:588,24,0	0/0:34,0:34:83.09:0,83,1340	0/0:36,0:33:84.27:0,84,1302	0/0:24,0:24:48.16:0,48,805	0/0:107,0:107:99:0,226,3690	0/0:29,0:29:66.22:0,66,1093	0/1:26,2:28:4.95:5,0,992	0/0:52,0:52:99:0,126,2080	0/0:18,0:18:39.12:0,39,628	0/0:40,0:40:93.31:0,93,1540	0/0:19,0:18:32.76:0,33,554	0/0:16,0:16:23.13:0,23,573
chr10	36170254	.	T	TG	11874.81	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-13.475;DP=586;FS=3.702;HRun=3;HaplotypeScore=57.3298;InbreedingCoeff=0.9994;MQ=88.33;MQ0=0;MQRankSum=-2.020;QD=35.98;ReadPosRankSum=1.657;VQSLOD=5.5424;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,111,1319	1/1:0,8:8:24.08:332,24,0	0/0:17,0:17:48.10:0,48,527	0/0:26,0:27:38.60:0,39,614	0/0:22,0:22:66.20:0,66,791	1/1:1,28:29:84.28:1171,84,0	1/1:2,26:28:72.24:1008,72,0	1/1:2,14:16:42.13:570,42,0	0/0:23,0:23:63.19:0,63,756	1/1:1,22:23:69.22:943,69,0	1/1:1,11:12:30.10:420,30,0	0/0:24,0:24:63.19:0,63,753	1/1:0,14:14:42.14:587,42,0	1/1:5,13:18:33.11:457,33,0	1/1:1,16:17:39.13:546,39,0	0/0:13,0:13:39.12:0,39,468	0/0:38,0:38:99:0,102,1212	1/1:2,26:28:72.24:1008,72,0	1/1:1,13:15:39.11:514,39,0	1/1:0,11:11:30.10:420,30,0	1/1:2,24:26:69.23:966,69,0	1/1:1,15:16:39.13:546,39,0	0/0:14,0:14:39.12:0,39,465	0/0:37,0:37:99:0,111,1330	1/1:2,14:16:39.13:546,39,0	1/1:1,20:22:60.20:833,60,0	1/1:0,16:16:39.13:546,39,0	1/1:3,12:15:33.11:462,33,0
chr10	36171476	.	AT	A	6127.85	PASS	AB=0.909;AC=47;AF=0.839;AN=56;BaseQRankSum=5.650;DP=529;FS=2.258;HRun=11;HaplotypeScore=78.2415;InbreedingCoeff=0.7100;MQ=75.80;MQ0=2;MQRankSum=-1.821;QD=13.38;ReadPosRankSum=1.857;VQSLOD=5.2694;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,0:46:75.36:221,75,0	1/1:0,8:8:17.98:148,18,0	0/1:18,1:18:8.69:9,0,223	0/0:13,0:12:17.53:0,18,152	1/1:2,0:21:28.50:82,28,0	1/1:1,7:8:20.98:172,21,0	1/1:4,13:17:4.05:239,4,0	1/1:5,21:26:62.91:517,63,0	1/1:0,0:24:38.70:112,39,0	1/1:5,17:22:22.23:344,22,0	1/1:3,5:8:14.97:123,15,0	0/0:22,1:23:26.48:0,26,487	1/1:3,18:22:52.95:425,53,0	1/1:5,16:22:43.95:350,44,0	1/1:0,24:24:65.92:542,66,0	1/1:1,0:26:42.55:123,43,0	1/1:2,0:25:11.75:86,12,0	1/1:3,16:19:12.96:313,13,0	1/1:3,16:19:47.89:388,48,0	1/1:3,10:14:0.01:196,0,0	1/1:2,12:14:0.98:214,1,0	1/1:3,12:15:35.96:296,36,0	0/0:9,0:9:21.04:0,21,216	0/0:25,0:26:50.59:0,51,715	1/1:1,11:12:32.96:271,33,0	1/1:3,22:26:64.91:520,65,0	1/1:2,16:18:47.90:388,48,0	1/1:0,2:2:5.99:49,6,0
chr10	36171802	.	CGG	C	3187.01	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=6.967;DP=418;FS=36.743;HRun=5;HaplotypeScore=53.8854;InbreedingCoeff=0.9275;MQ=67.69;MQ0=4;MQRankSum=-0.740;QD=24.90;ReadPosRankSum=7.172;VQSLOD=0.0879;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,32:34:66.22:922,66,0	0/0:5,0:5:15.05:0,15,266	0/0:15,0:13:34.92:0,35,440	0/0:16,0:15:4.44:0,4,384	1/1:4,14:16:18.87:268,19,0	0/0:12,0:12:33.03:0,33,543	0/0:14,0:14:42.13:0,42,723	0/0:18,0:18:39.04:0,39,505	1/1:1,17:18:42.14:580,42,0	0/0:14,0:14:30.08:0,30,438	0/0:6,0:6:15.05:0,15,270	0/0:16,0:16:42.58:0,43,682	0/0:14,0:14:37.93:0,38,624	0/0:9,0:9:15.05:0,15,275	0/0:8,0:8:24.07:0,24,411	1/1:4,19:23:54.18:753,54,0	1/1:7,28:33:60.19:838,60,0	0/0:17,0:17:48.12:0,48,807	0/0:13,0:13:39.09:0,39,563	0/0:10,0:10:30.07:0,30,450	0/0:34,0:34:96.10:0,96,1461	0/0:8,0:8:21.06:0,21,352	0/0:9,0:9:18.03:0,18,237	0/0:12,0:12:36.10:0,36,601	0/0:21,0:21:57.15:0,57,897	0/0:12,0:12:27.05:0,27,354	0/0:4,0:4:9.03:0,9,164	0/0:3,0:3:9.03:0,9,164
chr10	36172986	.	CGTGTGTGTGTGTGTGT	C	2769.70	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=8.022;DP=655;FS=29.278;HRun=0;HaplotypeScore=315.9335;InbreedingCoeff=0.8843;MQ=56.07;MQ0=11;MQRankSum=-6.110;QD=31.84;ReadPosRankSum=3.254;VQSLOD=1.1722;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:34:42.77:0,43,703	0/0:8,0:8:12.03:0,12,505	0/0:22,0:9:3.01:0,3,151	0/0:26,0:14:20.98:0,21,578	1/1:18,7:26:6.57:132,7,0	0/0:17,0:17:29.79:0,30,1335	0/0:27,0:27:30.08:0,30,1231	0/0:29,0:27:51.15:0,51,2280	1/1:13,12:25:47.75:1512,48,0	0/0:33,0:33:72.23:0,72,3391	0/0:14,0:18:17.92:0,18,512	0/0:21,0:21:36.12:0,36,2373	0/0:22,0:22:30.08:0,30,1143	0/0:23,0:23:30:0,30,1437	0/0:31,0:30:39.60:0,40,1997	1/1:11,5:17:16.72:683,17,0	1/1:10,8:18:9.37:591,9,0	0/0:20,0:19:24.08:0,24,1109	0/0:13,0:13:21.04:0,21,884	0/0:21,0:20:20.67:0,21,959	0/0:46,0:46:51.09:0,51,2178	0/0:17,0:16:12.04:0,12,468	0/0:17,0:17:24.06:0,24,1334	0/0:32,0:33:72.21:0,72,4223	0/0:30,0:30:32.50:0,32,1422	0/0:24,0:23:60.21:0,60,2922	0/0:17,0:18:34.67:0,35,1684	0/0:16,0:17:36.06:0,36,1222
chr10	36173012	.	T	TGTGTGC	5989.63	PASS	AB=0.844;AC=22;AF=0.393;AN=56;BaseQRankSum=-2.492;DP=654;FS=23.063;HRun=0;HaplotypeScore=230.3758;InbreedingCoeff=-0.5342;MQ=47.81;MQ0=18;MQRankSum=-6.498;QD=12.30;ReadPosRankSum=4.560;VQSLOD=2.4365;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:35,0:34:96.55:97,0,358	0/1:3,0:5:7.96:92,0,8	0/0:23,0:4:2.97:0,3,20	0/0:32,0:6:6.74:0,7,55	0/0:17,0:17:17.30:0,17,102	0/1:14,3:17:52.16:370,0,52	0/1:26,2:28:44.09:414,0,44	0/1:31,0:29:81.28:81,0,101	0/1:27,0:27:49.47:49,0,531	0/1:27,2:29:59.02:756,0,59	0/1:14,1:15:24.52:80,0,25	0/0:29,0:28:61.32:0,61,874	0/1:16,7:23:50.22:368,0,50	0/1:18,7:25:91.91:501,0,92	0/1:18,11:30:11.15:600,0,11	0/1:25,0:25:15.41:15,0,331	0/0:21,0:21:15.30:0,15,271	0/1:9,6:15:17.86:387,0,18	0/1:7,0:11:15.66:41,0,16	0/1:14,6:23:46.79:247,0,47	0/1:40,0:42:27.48:169,0,27	0/1:11,3:16:33.71:163,0,34	0/0:15,0:15:38.89:0,39,442	0/0:30,0:30:72.04:0,72,1101	1/1:18,9:30:2.45:369,2,0	0/1:13,13:27:36.36:786,0,36	0/1:14,3:17:29.25:234,0,29	0/1:11,1:12:52.89:169,0,53
chr10	36173020	.	T	TGTGTGC	8816.70	PASS	AB=1.000;AC=36;AF=0.643;AN=56;BaseQRankSum=-3.655;DP=603;FS=0.840;HRun=0;HaplotypeScore=205.8523;InbreedingCoeff=0.8323;MQ=48.12;MQ0=13;MQRankSum=-0.308;QD=21.66;ReadPosRankSum=-1.613;VQSLOD=4.1603;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:32:42.84:43,0,246	1/1:6,0:6:11.94:148,12,0	0/0:18,0:3:8.72:0,9,49	0/0:26,0:3:5.37:0,5,24	0/0:13,0:13:17.50:0,17,100	1/1:10,2:15:32.18:579,32,0	1/1:26,3:30:56.89:693,57,0	1/1:31,0:30:74.31:598,74,0	0/0:26,0:26:35.35:0,35,569	1/1:31,3:34:64.26:889,64,0	1/1:12,1:13:14.32:162,14,0	0/0:29,0:29:71.12:0,71,900	1/1:16,3:20:35.47:506,35,0	1/1:18,4:22:41.48:665,41,0	1/1:18,6:25:46.69:801,47,0	0/0:21,0:21:15.40:0,15,256	0/0:21,0:21:26.07:0,26,293	1/1:14,2:16:29.79:463,30,0	0/1:12,0:12:1.96:155,0,2	1/1:16,2:20:32.34:402,32,0	1/1:38,0:38:41.04:429,41,0	1/1:12,2:14:17.97:259,18,0	0/0:15,0:15:41.92:0,42,413	0/0:27,0:27:52.08:0,52,894	1/1:21,7:29:32.49:532,32,0	1/1:24,0:24:65.28:804,65,0	1/1:8,2:11:23.95:386,24,0	1/1:10,1:12:26.48:303,26,0
chr10	36173027	.	GCGCA	G	1848.82	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=8.175;DP=605;FS=10.487;HRun=0;HaplotypeScore=210.3272;InbreedingCoeff=0.8655;MQ=55.34;MQ0=13;MQRankSum=-5.875;QD=11.70;ReadPosRankSum=2.754;VQSLOD=2.3445;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:30,10:39:56.61:475,57,0	0/0:6,0:6:9.03:0,9,178	0/0:19,0:5:12.03:0,12,159	0/1:30,0:8:27.94:28,0,44	1/1:0,17:17:17.62:124,18,0	0/0:15,0:15:32.64:0,33,605	0/0:31,0:31:62.95:0,63,1304	0/0:28,0:27:75.03:0,75,1524	1/1:17,12:29:62.81:738,63,0	0/0:30,0:30:73.72:0,74,1615	0/0:13,0:13:23.47:0,23,369	0/0:26,0:26:72.22:0,72,1547	0/0:18,0:18:39.12:0,39,773	0/0:20,0:20:43.66:0,44,863	0/0:26,0:26:63.05:0,63,1216	1/1:15,6:21:36.23:350,36,0	1/1:12,9:21:31.66:311,32,0	0/0:17,0:16:39.01:0,39,781	0/0:11,0:11:27.06:0,27,615	0/0:22,0:22:44.61:0,45,772	0/0:34,0:34:44.92:0,45,861	0/0:17,0:17:35.92:0,36,495	0/0:13,0:13:36.12:0,36,809	0/0:28,0:28:75.11:0,75,1540	0/0:26,0:26:41.74:0,42,773	0/0:24,0:23:60.96:0,61,1386	0/0:10,0:10:21.07:0,21,429	0/0:13,0:13:33.07:0,33,714
chr10	36176101	.	GC	G	2825.36	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=10.530;DP=707;FS=7.966;HRun=4;HaplotypeScore=65.8538;InbreedingCoeff=0.9994;MQ=77.99;MQ0=0;MQRankSum=-3.225;QD=31.05;ReadPosRankSum=3.100;VQSLOD=4.0607;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,123,1665	0/0:8,0:8:24.08:0,24,335	0/0:18,0:18:51.14:0,51,639	0/0:20,0:20:42.22:0,42,703	1/1:1,20:21:54.17:647,54,0	0/0:21,0:21:63.21:0,63,870	0/0:34,0:34:99:0,99,1349	0/0:33,0:33:96.30:0,96,1308	1/1:0,18:18:51.16:612,51,0	0/0:32,0:32:93.27:0,93,1265	0/0:20,0:20:57.19:0,57,797	0/0:30,0:30:84.27:0,84,1154	0/0:22,0:22:66.22:0,66,921	0/0:25,0:25:72.24:0,72,1005	0/0:29,0:29:84.25:0,84,1140	1/1:0,13:13:39.12:468,39,0	1/1:0,39:39:99:1260,105,0	0/0:37,0:37:99:0,108,1503	0/0:23,0:23:60.17:0,60,801	0/0:22,0:22:66.22:0,66,917	0/0:41,0:41:99:0,117,1585	0/0:21,0:21:60.20:0,60,839	0/0:19,0:19:54.17:0,54,738	0/0:28,0:28:84.26:0,84,1155	0/0:21,0:21:60.17:0,60,819	0/0:26,0:26:78.26:0,78,1090	0/0:30,0:30:90.28:0,90,1239	0/0:12,0:12:36.12:0,36,499
chr10	36179950	.	G	GTTT	17346.15	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=4.566;DP=624;FS=14.304;HRun=9;HaplotypeScore=105.9148;InbreedingCoeff=0.9957;MQ=75.07;MQ0=1;MQRankSum=-7.510;QD=32.54;ReadPosRankSum=1.955;VQSLOD=2.5712;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,0:27:24.14:52,24,0	1/1:8,0:8:15.94:230,16,0	0/0:21,0:21:51.01:0,51,604	0/0:18,0:16:35.39:0,35,372	1/1:5,28:35:81.02:1229,81,0	1/1:31,0:31:71.27:1028,71,0	1/1:23,0:23:54.18:803,54,0	1/1:26,0:26:59.67:862,60,0	1/1:6,15:26:54.13:946,54,0	1/1:29,0:30:60.17:857,60,0	1/1:17,0:17:39.06:514,39,0	0/0:19,0:20:54.07:0,54,648	1/1:11,0:11:24.08:354,24,0	1/1:16,0:16:38.99:608,39,0	1/1:21,0:21:51.17:753,51,0	1/1:3,18:21:39.09:705,39,0	1/1:5,25:30:57.20:1124,57,0	1/1:23,0:24:64.69:857,65,0	1/1:24,0:24:57.14:795,57,0	1/1:25,0:25:69.20:993,69,0	1/1:18,0:19:57.12:768,57,0	1/1:14,0:14:30.04:384,30,0	0/0:21,0:21:42.09:0,42,529	0/0:11,0:11:30.09:0,30,379	1/1:23,0:23:53.33:712,53,0	1/1:27,0:27:75.51:1042,76,0	1/1:33,0:33:76.82:1049,77,0	1/1:21,0:21:48.15:680,48,0
chr10	36179959	.	T	TTTA	23212.78	PASS	AB=1.000;AC=40;AF=0.714;AN=56;BaseQRankSum=-9.545;DP=635;FS=16.387;HRun=0;HaplotypeScore=84.4057;InbreedingCoeff=0.6712;MQ=74.67;MQ0=1;MQRankSum=-5.474;QD=44.81;ReadPosRankSum=4.331;VQSLOD=5.6529;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:55.44:0,55,227	1/1:0,5:5:15.05:343,15,0	0/0:19,0:19:57.17:0,57,843	0/0:19,0:17:36.83:0,37,499	0/1:33,0:33:28.14:634,0,28	1/1:0,28:30:72.23:1586,72,0	1/1:0,23:24:54.19:1236,54,0	1/1:2,24:31:87.07:1490,87,0	0/1:25,0:25:11.26:505,0,11	1/1:2,24:27:69.19:1383,69,0	1/1:0,13:16:42.10:818,42,0	0/0:25,0:25:75.13:0,75,973	1/1:0,9:10:24.08:549,24,0	1/1:1,15:18:38.87:891,39,0	1/1:0,20:20:51.18:1167,51,0	0/1:20,0:20:50.11:364,0,50	0/1:27,0:27:4.83:610,0,5	1/1:2,19:23:66.18:1387,66,0	1/1:7,21:30:69.19:1327,69,0	1/1:0,26:29:75.22:1581,75,0	1/1:1,19:20:57.19:1212,57,0	1/1:1,15:17:33.06:617,33,0	0/0:15,0:15:45.14:0,45,705	0/0:12,0:12:36.10:0,36,539	1/1:1,24:26:54.14:1077,54,0	1/1:1,27:30:81.02:1730,81,0	1/1:0,33:34:78.26:1628,78,0	1/1:0,22:22:48.16:1077,48,0
chr10	36180280	.	TTCTCTCTCTCTCTCTCTCTCTCTC	T	3875.70	PASS	AB=0.835;AC=26;AF=0.565;AN=46;BaseQRankSum=1.967;DP=532;FS=1.422;HRun=0;HaplotypeScore=297.2643;InbreedingCoeff=0.4642;MQ=67.41;MQ0=23;MQRankSum=-0.957;QD=13.89;ReadPosRankSum=1.041;VQSLOD=1.7720;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:26:21.07:0,21,855	1/1:3,1:4:3.01:173,3,0	0/0:31,0:22:3.01:0,3,67	0/0:28,0:17:7.27:0,7,104	0/0:17,0:19:8.95:0,9,90	./.	1/1:25,0:22:6.02:125,6,0	1/1:37,0:36:4.64:59,5,0	0/1:17,0:20:18.94:67,0,19	1/1:20,2:23:18.01:697,18,0	./.	0/0:13,0:13:6.02:0,6,293	1/1:7,1:9:6.02:343,6,0	1/1:21,3:24:3.01:48,3,0	1/1:22,1:25:6.01:74,6,0	0/1:12,0:16:42.88:113,0,43	0/0:13,0:13:10.25:0,10,127	./.	1/1:15,0:16:1.20:170,1,0	1/1:10,0:10:3:26,3,0	0/0:14,0:11:0.89:0,1,2	1/1:11,4:16:9.03:246,9,0	./.	0/0:17,0:16:12.93:0,13,576	./.	1/1:27,2:31:23.33:1110,23,0	1/1:19,2:21:15.04:626,15,0	0/0:8,0:7:1.25:0,1,3
chr10	36180362	.	GTGTGTGTGTA	G	1754.19	PASS	AB=1.000;AC=31;AF=0.620;AN=50;BaseQRankSum=5.032;DP=644;FS=0.000;HRun=0;HaplotypeScore=182.2276;InbreedingCoeff=0.2665;MQ=38.74;MQ0=90;MQRankSum=-0.576;QD=3.75;ReadPosRankSum=-0.222;VQSLOD=2.1115;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:40,0:30:15.98:16,0,784	0/1:15,0:13:25.31:25,0,64	0/0:2,0:1:2.97:0,3,20	./.	1/1:17,2:18:14.88:151,15,0	1/1:28,0:23:8.50:77,9,0	0/0:41,0:32:3:0,3,83	0/1:39,0:37:99:237,0,140	1/1:4,14:17:3.01:92,3,0	0/1:36,0:32:95.45:252,0,95	0/1:15,0:15:0.08:0,0,0	0/0:12,0:11:11.07:0,11,407	1/1:25,0:22:9.81:59,10,0	1/1:25,0:23:5.98:53,6,0	1/1:27,0:25:1.54:4,2,0	1/1:11,13:19:3.01:61,3,0	1/1:12,14:21:5.18:97,5,0	1/1:9,0:7:8.66:66,9,0	0/1:14,0:11:18.22:74,0,18	0/0:27,0:25:0.47:0,0,1	./.	0/1:36,0:33:0:0,0,0	0/0:12,0:11:20.96:0,21,336	0/0:24,0:16:15.39:0,15,481	./.	1/1:24,0:22:23.72:293,24,0	1/1:35,0:33:23.89:278,24,0	1/1:12,0:4:6.02:69,6,0
chr10	36180364	.	GTGTGTGTA	G	2348.11	PASS	AB=0.997;AC=32;AF=0.640;AN=50;BaseQRankSum=5.497;DP=646;FS=0.000;HRun=0;HaplotypeScore=173.5369;InbreedingCoeff=0.2945;MQ=39.32;MQ0=89;MQRankSum=-0.884;QD=4.72;ReadPosRankSum=-0.627;VQSLOD=2.4231;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:40,0:31:38.26:38,0,558	0/1:13,0:11:43.55:44,0,46	0/0:3,0:1:2.97:0,3,20	./.	1/1:20,0:19:14.88:192,15,0	1/1:29,0:24:8.87:128,9,0	0/0:40,0:32:3:0,3,72	0/1:40,0:38:99:237,0,130	1/1:18,0:17:3.01:75,3,0	0/1:36,0:32:18.56:377,0,19	0/1:15,0:15:0.08:0,0,0	0/0:12,0:11:11.07:0,11,336	1/1:10,15:22:10.77:94,11,0	1/1:25,0:23:6.02:89,6,0	1/1:28,0:26:1.41:3,1,0	1/1:24,0:19:3.01:77,3,0	1/1:26,0:20:9.37:111,9,0	1/1:9,0:7:10.25:88,10,0	0/1:15,0:11:3.21:78,0,3	0/1:28,0:26:0:0,0,0	./.	0/1:35,0:32:0:0,0,0	0/0:12,0:11:20.96:0,21,275	0/0:24,0:16:10.41:0,10,366	./.	1/1:24,0:22:30.07:370,30,0	1/1:34,1:33:30.62:389,31,0	1/1:11,0:4:6.02:106,6,0
chr10	36180366	.	GTGTGTA	G	2748.45	PASS	AB=0.766;AC=35;AF=0.673;AN=52;BaseQRankSum=5.145;DP=652;FS=0.000;HRun=0;HaplotypeScore=166.6698;InbreedingCoeff=0.2100;MQ=39.72;MQ0=88;MQRankSum=-0.845;QD=5.02;ReadPosRankSum=-1.367;VQSLOD=1.8580;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:40,0:30:45.88:46,0,332	0/1:4,9:11:28.36:60,0,28	0/0:4,0:1:2.97:0,3,20	./.	1/1:19,0:18:14.87:145,15,0	1/1:7,21:26:8.57:178,9,0	0/0:14,25:31:3:0,3,55	0/1:41,0:39:99:237,0,124	1/1:18,0:17:3.01:57,3,0	0/1:16,20:32:27.94:523,0,28	0/1:2,13:15:0.02:0,0,0	0/0:12,0:11:11.07:0,11,266	1/1:22,2:21:10.73:107,11,0	1/1:5,21:24:6.02:120,6,0	1/1:6,22:27:0.73:1,1,0	1/1:24,0:19:3.01:61,3,0	1/1:26,0:20:9.37:92,9,0	1/1:9,1:9:11.70:126,12,0	0/1:15,0:11:2.15:95,0,2	0/1:5,25:27:0:0,0,0	1/1:23,0:13:3:25,3,0	0/1:10,26:33:0:0,0,0	0/0:12,0:11:20.15:0,20,209	0/1:25,0:17:11.79:12,0,263	./.	1/1:9,16:23:33.07:442,33,0	1/1:11,24:33:30.72:432,31,0	1/1:7,4:4:6.02:135,6,0
chr10	36180372	.	ATGTGTGTGTGTG	A	1524.35	PASS	AB=0.939;AC=25;AF=0.481;AN=52;BaseQRankSum=3.926;DP=605;FS=1.419;HRun=0;HaplotypeScore=167.7550;InbreedingCoeff=0.2553;MQ=41.11;MQ0=84;MQRankSum=0.441;QD=4.75;ReadPosRankSum=-1.233;VQSLOD=2.6879;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:30:20.03:0,20,1300	0/1:10,0:10:25.65:26,0,101	0/0:5,0:2:5.98:0,6,63	./.	0/0:18,0:17:0.64:0,1,38	1/1:25,0:21:8.70:79,9,0	0/0:38,0:30:3.01:0,3,89	0/1:23,18:39:99:532,0,221	1/1:14,0:14:3.01:57,3,0	0/1:33,0:28:99:154,0,206	1/1:15,0:15:2.83:20,3,0	0/0:14,0:13:18.04:0,18,621	1/1:22,0:19:4.54:25,5,0	1/1:24,0:22:5.95:43,6,0	0/0:26,0:24:2.04:0,2,7	1/1:18,0:13:3.01:30,3,0	0/1:21,0:16:47.32:47,0,53	1/1:10,0:9:14.88:154,15,0	0/0:14,0:10:5.95:0,6,42	0/0:29,0:26:0.47:0,0,1	1/1:24,0:13:3.01:50,3,0	0/0:27,0:26:0:0,0,0	0/0:13,0:13:27.02:0,27,625	0/0:23,0:15:17.96:0,18,764	./.	0/1:21,0:19:86.56:164,0,87	1/1:33,0:31:4.04:229,4,0	1/1:10,0:4:6.02:72,6,0
chr10	36181571	.	AG	A	1669.26	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.054;DP=664;FS=0.533;HRun=4;HaplotypeScore=68.8952;InbreedingCoeff=0.9801;MQ=80.75;MQ0=0;MQRankSum=-2.265;QD=32.73;ReadPosRankSum=2.000;VQSLOD=4.2952;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,49:51:99:1764,147,0	0/0:7,0:7:21.07:0,21,293	0/0:23,0:23:30.41:0,30,542	0/0:17,0:17:15.49:0,15,370	0/0:19,0:19:57.19:0,57,787	0/0:16,0:16:48.16:0,48,672	0/0:34,0:34:96.29:0,96,1309	0/0:29,0:29:81.26:0,81,1119	0/0:17,0:17:51.17:0,51,713	0/0:24,0:24:66.22:0,66,923	0/0:16,0:16:48.16:0,48,659	0/0:24,0:24:69.23:0,69,964	0/0:20,0:20:60.20:0,60,839	0/0:29,0:29:84.28:0,84,1176	0/0:35,0:34:99:0,102,1412	0/0:23,0:23:69.21:0,69,933	0/0:30,0:30:87.25:0,87,1194	0/0:26,0:26:72.21:0,72,987	0/0:22,0:22:66.22:0,66,924	0/0:24,0:24:72.23:0,72,991	0/0:38,0:37:99:0,111,1535	0/0:25,0:25:69.22:0,69,950	0/0:10,0:10:30.10:0,30,420	0/0:25,0:25:72.24:0,72,1005	0/0:26,0:26:72.20:0,72,969	0/0:21,0:21:60.20:0,60,840	0/0:24,0:24:72.22:0,72,990	0/0:9,0:9:27.09:0,27,378
chr10	36182026	.	GTC	G	810.02	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.986;DP=748;FS=2.625;HRun=0;HaplotypeScore=103.8677;InbreedingCoeff=0.9975;MQ=71.13;MQ0=7;MQRankSum=-0.050;QD=22.50;ReadPosRankSum=0.289;VQSLOD=3.7747;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,34:36:66.22:905,66,0	0/0:13,0:13:39.12:0,39,650	0/0:42,0:34:68.12:0,68,983	0/0:82,0:54:86.97:0,87,1333	0/0:20,0:20:45.12:0,45,723	0/0:19,0:19:54.18:0,54,951	0/0:27,0:27:78.25:0,78,1329	0/0:28,0:28:75.24:0,75,1250	0/0:22,0:22:63.18:0,63,1028	0/0:31,0:31:84.26:0,84,1398	0/0:21,0:21:63.20:0,63,1089	0/0:29,0:29:84.29:0,84,1470	0/0:30,0:30:87.27:0,87,1495	0/0:25,0:25:69.21:0,69,1184	0/0:31,0:31:90.28:0,90,1538	0/0:19,0:19:54.16:0,54,916	0/0:29,0:29:81.11:0,81,1334	0/0:16,0:16:45.15:0,45,797	0/0:12,0:12:36.12:0,36,606	0/0:15,0:15:45.12:0,45,739	0/0:45,0:45:99:0,135,2309	0/0:24,0:24:69.21:0,69,1126	0/0:17,0:17:36.11:0,36,606	0/0:33,0:32:84.29:0,84,1442	0/0:22,0:22:63.22:0,63,1090	0/0:32,0:32:90.30:0,90,1566	0/0:14,0:14:39.13:0,39,683	0/0:12,0:12:24.06:0,24,396
chr10	36182103	.	C	CGT	1513.90	PASS	AB=0.898;AC=38;AF=0.704;AN=54;BaseQRankSum=-1.675;DP=622;FS=3.010;HRun=0;HaplotypeScore=96.8759;InbreedingCoeff=0.1105;MQ=61.96;MQ0=16;MQRankSum=1.210;QD=3.06;ReadPosRankSum=-1.005;VQSLOD=2.2214;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:30,1:30:12.01:136,12,0	0/1:10,4:14:25.74:39,0,26	./.	0/1:35,0:12:0:1,0,0	1/1:12,0:12:2.99:24,3,0	0/1:17,0:16:6.38:59,0,6	0/1:32,2:33:23.23:80,0,23	1/1:21,0:20:3.43:19,3,0	1/1:14,0:18:3:26,3,0	1/1:24,4:28:9.03:128,9,0	1/1:11,2:12:3.01:44,3,0	0/0:14,0:23:11.32:0,11,55	1/1:14,5:19:9.03:133,9,0	1/1:18,1:19:6:67,6,0	1/1:14,9:22:6.02:89,6,0	1/1:7,0:12:4.63:36,5,0	1/1:20,0:20:12.37:89,12,0	1/1:14,3:15:12.47:152,12,0	1/1:18,0:20:6:51,6,0	0/0:12,0:12:3:0,3,32	1/1:43,7:48:9.03:133,9,0	0/1:17,0:16:3.21:60,0,3	0/0:28,0:28:2.94:0,3,34	0/0:27,0:39:17.04:0,17,84	0/1:18,8:24:35.91:118,0,36	1/1:25,0:23:3.01:44,3,0	0/1:11,1:13:33.96:59,0,34	0/1:8,2:10:23.19:79,0,23
chr10	36184048	.	CT	C	23129.62	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=14.302;DP=818;FS=17.294;HRun=3;HaplotypeScore=148.0172;InbreedingCoeff=0.9999;MQ=84.15;MQ0=0;MQRankSum=-5.545;QD=33.91;ReadPosRankSum=2.688;VQSLOD=2.7637;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,45:45:99:1599,129,0	1/1:1,11:12:33.10:409,33,0	0/0:29,0:29:69.38:0,69,931	0/0:19,0:19:42.10:0,42,554	1/1:1,27:28:72.23:892,72,0	1/1:1,28:29:84.26:1041,84,0	1/1:0,37:37:99:1376,111,0	1/1:2,35:37:99:1289,105,0	1/1:2,26:28:75.23:930,75,0	1/1:0,35:35:99:1302,105,0	1/1:0,22:22:57.18:706,57,0	0/0:30,0:30:90.30:0,90,1296	1/1:1,30:31:84.26:1041,84,0	1/1:0,30:30:87.27:1078,87,0	1/1:5,37:42:99:1227,99,0	1/1:1,30:31:80.88:1004,81,0	1/1:2,30:32:84.26:1041,84,0	1/1:0,21:21:54.17:667,54,0	1/1:3,32:35:96.28:1166,96,0	1/1:0,25:25:69.17:838,69,0	1/1:0,45:45:99:1599,129,0	1/1:1,24:25:63.20:781,63,0	0/0:25,0:25:75.24:0,75,1062	0/0:33,0:33:99:0,99,1425	1/1:0,24:24:63.20:781,63,0	1/1:0,24:24:69.20:842,69,0	1/1:2,26:28:78.24:966,78,0	1/1:1,15:16:45.14:557,45,0
chr10	36184355	.	C	CTTT	4545.78	PASS	AB=0.614;AC=38;AF=0.679;AN=56;BaseQRankSum=0.802;DP=649;FS=0.449;HRun=13;HaplotypeScore=116.6490;InbreedingCoeff=0.4930;MQ=74.83;MQ0=1;MQRankSum=-2.213;QD=9.07;ReadPosRankSum=-2.792;VQSLOD=1.4911;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:41:46.64:0,47,685	1/1:2,0:9:17.90:133,18,0	0/0:14,0:14:15.24:0,15,107	0/0:14,0:17:17.63:0,18,132	1/1:6,0:16:8.14:39,8,0	0/1:11,1:28:21.14:282,0,21	0/1:5,1:19:29.15:249,0,29	1/1:16,0:33:13.48:343,13,0	1/1:2,0:20:17.95:58,18,0	1/1:12,0:30:44.93:361,45,0	1/1:6,0:20:38.75:298,39,0	0/0:24,0:29:35.35:0,35,501	0/1:8,0:25:4.19:147,0,4	1/1:5,0:14:10.21:78,10,0	1/1:3,2:22:28.19:271,28,0	0/1:10,0:27:23.19:23,0,103	1/1:14,0:26:9.11:191,9,0	1/1:3,1:22:18.21:154,18,0	0/1:8,1:22:6.83:308,0,7	1/1:6,1:23:37.68:291,38,0	1/1:2,0:24:26.40:188,26,0	1/1:4,1:27:19.85:313,20,0	0/0:22,0:24:47.57:0,48,477	0/0:16,0:20:41.74:0,42,399	1/1:7,0:27:7.82:246,8,0	0/1:7,0:22:22.68:279,0,23	1/1:11,0:24:28.84:201,29,0	1/1:3,0:18:11.95:91,12,0
chr10	36185256	.	T	TA	325.03	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=-1.719;DP=464;FS=2.008;HRun=10;HaplotypeScore=50.8182;InbreedingCoeff=0.6421;MQ=81.46;MQ0=0;MQRankSum=-2.319;QD=7.93;ReadPosRankSum=-0.857;VQSLOD=1.3091;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,15:17:39.10:416,39,0	0/0:7,0:7:14.96:0,15,123	0/1:23,0:24:13.31:13,0,257	0/0:14,0:13:21.32:0,21,135	0/0:14,0:14:35.96:0,36,296	0/0:22,0:22:53.92:0,54,443	0/0:18,0:18:50.94:0,51,419	0/0:21,0:21:44.90:0,45,367	0/0:16,0:16:44.94:0,45,369	0/0:17,0:17:38.94:0,39,318	0/0:22,0:23:24.31:0,24,350	0/0:13,0:13:35.96:0,36,296	0/0:15,0:17:49.02:0,49,381	0/0:12,0:12:26.93:0,27,219	0/0:18,0:18:38.93:0,39,320	0/0:19,0:19:50.93:0,51,419	0/0:18,0:19:46.98:0,47,375	0/0:13,0:13:32.96:0,33,271	0/0:18,0:18:26.91:0,27,220	0/0:13,0:13:32.93:0,33,268	0/0:8,0:8:17.98:0,18,148	0/0:15,0:16:37.98:0,38,301	0/0:17,0:19:37.97:0,38,301	0/0:15,0:15:41.95:0,42,345	0/0:13,0:13:35.94:0,36,295	0/0:19,0:19:47.94:0,48,394	0/0:30,0:31:79.91:0,80,640	0/0:8,0:8:23.97:0,24,197
chr10	36185991	.	C	CTT	6147.21	PASS	AB=0.960;AC=39;AF=0.696;AN=56;BaseQRankSum=6.465;DP=607;FS=7.097;HRun=3;HaplotypeScore=120.1283;InbreedingCoeff=0.7895;MQ=55.37;MQ0=18;MQRankSum=-7.647;QD=16.93;ReadPosRankSum=-4.000;VQSLOD=0.6646;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:25,8:36:67.96:688,68,0	1/1:6,1:7:10.34:108,10,0	0/0:45,0:11:17.02:0,17,186	0/0:44,0:11:1.13:0,1,196	0/1:23,0:24:30.19:30,0,124	1/1:12,3:15:16.87:242,17,0	1/1:15,4:21:47.28:535,47,0	1/1:20,4:25:46.13:513,46,0	0/0:12,0:13:7.76:0,8,129	1/1:15,1:18:19.24:311,19,0	1/1:8,4:13:34.74:389,35,0	0/0:23,0:23:63.18:0,63,839	1/1:10,2:14:31.14:305,31,0	1/1:16,1:18:17.44:307,17,0	1/1:12,4:16:38.61:439,39,0	0/0:20,0:19:8.09:0,8,142	0/0:44,0:43:92.96:0,93,552	1/1:16,1:19:38.77:383,39,0	1/1:17,0:19:8.33:233,8,0	1/1:21,5:26:40.86:444,41,0	1/1:8,0:8:8.63:53,9,0	1/1:3,13:15:26.93:274,27,0	0/0:18,0:18:48.07:0,48,619	0/0:36,0:36:99:0,108,1474	1/1:17,1:18:27.01:306,27,0	1/1:12,2:15:13.63:236,14,0	1/1:18,2:22:28.81:331,29,0	1/1:3,0:3:2.98:21,3,0
chr10	36185994	.	TC	T	5321.70	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=7.765;DP=599;FS=4.703;HRun=1;HaplotypeScore=105.3370;InbreedingCoeff=0.8858;MQ=53.94;MQ0=20;MQRankSum=-4.310;QD=12.61;ReadPosRankSum=-3.115;VQSLOD=2.5142;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:33,0:33:77.87:487,78,0	1/1:6,1:7:19.72:147,20,0	0/0:46,0:10:7.50:0,8,131	0/0:47,1:13:11.76:0,12,172	1/1:24,1:25:39.38:288,39,0	1/1:15,0:15:37.32:256,37,0	1/1:18,1:19:48.46:311,48,0	1/1:23,2:25:59.07:416,59,0	1/1:13,0:13:1.63:104,2,0	1/1:16,1:17:36.55:224,37,0	1/1:12,1:13:36.59:209,37,0	0/0:23,0:23:66.12:0,66,761	1/1:15,0:14:37.50:243,38,0	1/1:17,1:15:30.36:190,30,0	1/1:12,4:15:40.03:254,40,0	1/1:18,0:17:20.27:176,20,0	1/1:41,1:40:10.64:218,11,0	1/1:19,2:18:37.60:215,38,0	1/1:17,0:17:32.08:241,32,0	1/1:22,4:25:50.79:329,51,0	1/1:7,2:8:13.49:82,13,0	1/1:12,1:12:20.33:102,20,0	0/0:20,0:20:50.32:0,50,574	0/0:38,0:38:99:0,107,1302	1/1:17,3:20:35.16:240,35,0	1/1:11,4:15:31.14:256,31,0	1/1:20,2:22:40.47:288,40,0	1/1:3,0:3:5.97:45,6,0
chr10	36186014	.	TC	T	4201.01	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=1.276;DP=609;FS=8.677;HRun=7;HaplotypeScore=98.5997;InbreedingCoeff=0.9680;MQ=52.76;MQ0=25;MQRankSum=-2.451;QD=12.85;ReadPosRankSum=-3.844;VQSLOD=1.7465;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:18,8:26:42.33:416,42,0	1/1:5,2:7:19.51:162,20,0	0/0:57,2:9:16.82:0,17,150	0/0:56,0:11:17.43:0,17,133	0/0:21,0:21:50.78:0,51,435	1/1:7,8:15:36.05:354,36,0	1/1:8,13:21:20.40:199,20,0	1/1:16,7:23:23.40:215,23,0	0/0:13,0:13:38.90:0,39,358	1/1:12,5:17:40.30:346,40,0	1/1:6,9:15:13.56:122,14,0	0/0:22,0:22:57.14:0,57,668	1/1:11,3:13:20.73:191,21,0	1/1:13,4:16:12.83:150,13,0	1/1:11,8:18:23.95:228,24,0	0/0:14,0:13:26.93:0,27,236	0/0:36,0:34:78.40:0,78,691	1/1:25,3:25:25.35:338,25,0	1/1:5,10:15:26.06:237,26,0	1/1:9,12:20:27.69:215,28,0	1/1:4,8:11:9.02:91,9,0	1/1:6,3:9:11.50:92,12,0	0/0:22,0:22:63.13:0,63,716	0/0:36,0:36:99:0,99,1182	1/1:7,16:23:24.04:237,24,0	1/1:4,10:14:23.12:197,23,0	1/1:16,6:22:28.39:260,28,0	1/1:2,7:9:15.03:152,15,0
chr10	36187592	.	CGT	C	437.83	PASS	AB=0.974;AC=27;AF=0.844;AN=32;BaseQRankSum=2.637;DP=422;FS=3.336;HRun=0;HaplotypeScore=59.7060;InbreedingCoeff=0.2622;MQ=74.00;MQ0=15;MQRankSum=-0.630;QD=1.77;ReadPosRankSum=1.050;VQSLOD=0.9008;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	1/1:7,0:7:5.96:44,6,0	./.	./.	./.	1/1:12,0:12:2.94:18,3,0	1/1:14,0:14:3.45:23,3,0	./.	./.	./.	./.	0/0:24,1:23:5.71:0,6,32	1/1:14,0:14:8.91:64,9,0	./.	0/1:11,0:12:0:0,0,0	0/1:19,0:18:9.08:9,0,78	1/1:21,0:21:11.94:90,12,0	1/1:24,0:23:17.12:117,17,0	1/1:14,0:14:1.25:3,1,0	./.	1/1:33,0:32:2.81:22,3,0	./.	0/1:10,0:9:0:0,0,0	1/1:30,5:35:3:31,3,0	./.	1/1:12,0:12:5.49:32,5,0	1/1:10,0:10:8.94:65,9,0	1/1:10,0:10:2.74:12,3,0
chr10	36187819	.	CT	C	1786.25	PASS	AB=0.870;AC=10;AF=0.179;AN=56;BaseQRankSum=8.640;DP=549;FS=0.955;HRun=9;HaplotypeScore=54.1404;InbreedingCoeff=0.7650;MQ=75.03;MQ0=0;MQRankSum=0.483;QD=16.85;ReadPosRankSum=3.482;VQSLOD=3.7039;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:51,1:52:99:0,114,1527	0/0:11,0:11:27.08:0,27,312	0/1:13,2:15:30.21:30,0,226	0/0:15,0:15:23.62:0,24,238	1/1:3,16:19:42.01:384,42,0	0/0:18,0:18:53.96:0,54,589	0/0:35,1:36:65.77:0,66,996	0/0:21,0:21:54.12:0,54,609	1/1:2,19:21:51.02:467,51,0	0/0:9,0:9:24.07:0,24,274	0/0:10,0:10:27.07:0,27,303	0/0:24,0:24:57.17:0,57,658	0/0:21,0:21:57.14:0,57,645	0/0:15,0:15:45.08:0,45,488	0/0:17,0:17:48.14:0,48,554	1/1:1,18:19:54.03:494,54,0	1/1:3,23:26:34.42:569,34,0	0/0:16,0:16:39.12:0,39,450	0/0:24,1:26:35.51:0,36,623	0/0:9,0:9:21.06:0,21,242	0/0:28,0:28:72.19:0,72,813	0/0:14,0:14:42.12:0,42,485	0/0:15,0:15:42.12:0,42,485	0/0:24,0:24:66.20:0,66,762	0/0:15,0:15:45.13:0,45,519	0/0:28,0:28:72.21:0,72,831	0/0:18,0:18:51.60:0,52,570	0/1:5,1:6:9.41:9,0,155
chr10	36188174	.	AC	A	13273.86	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=8.313;DP=546;FS=7.084;HRun=1;HaplotypeScore=61.0446;InbreedingCoeff=0.9714;MQ=87.17;MQ0=0;MQRankSum=-2.945;QD=38.47;ReadPosRankSum=1.013;VQSLOD=5.2352;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,31:31:90.30:1259,90,0	1/1:0,10:10:30.10:420,30,0	0/0:19,0:19:57.19:0,57,887	0/0:19,0:20:46.36:0,46,662	0/0:19,0:19:54.13:0,54,805	1/1:0,11:11:27.09:378,27,0	1/1:0,31:31:78.24:1091,78,0	1/1:0,26:26:75.25:1048,75,0	0/0:20,0:20:60.20:0,60,958	1/1:0,14:15:45.15:624,45,0	1/1:0,4:4:9.03:126,9,0	0/0:30,0:30:90.31:0,90,1433	1/1:0,15:15:38.41:545,38,0	1/1:0,21:21:60.20:838,60,0	1/1:0,22:22:63.21:881,63,0	0/0:8,0:8:24.08:0,24,383	0/0:40,0:40:99:0,111,1770	1/1:0,25:25:60.20:839,60,0	1/1:0,20:20:60.18:821,60,0	1/1:1,8:9:24.08:332,24,0	1/1:0,39:39:99:1552,111,0	1/1:0,7:7:15.05:209,15,0	0/0:15,0:15:45.15:0,45,718	0/0:30,0:30:87.30:0,87,1381	1/1:0,19:19:57.19:796,57,0	1/1:0,17:17:51.13:676,51,0	1/1:0,19:19:54.18:755,54,0	1/1:0,4:4:6.02:84,6,0
chr10	36189594	.	ATCTG	A	8322.89	PASS	AB=0.953;AC=36;AF=0.643;AN=56;BaseQRankSum=-7.259;DP=623;FS=4.047;HRun=0;HaplotypeScore=128.2081;InbreedingCoeff=0.2132;MQ=69.60;MQ0=3;MQRankSum=-0.275;QD=15.82;ReadPosRankSum=1.549;VQSLOD=4.1721;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,28:32:27.04:449,27,0	1/1:0,7:7:18.06:323,18,0	0/0:23,0:19:39.50:0,39,391	0/0:17,0:13:29.06:0,29,288	1/1:5,29:34:45.09:752,45,0	0/1:3,20:23:10.03:556,0,10	1/1:1,8:9:6.02:107,6,0	1/1:32,0:30:77.83:667,78,0	1/1:0,18:18:36.12:646,36,0	1/1:5,29:34:89.99:1109,90,0	1/1:1,25:26:27.09:485,27,0	0/0:16,0:16:26.99:0,27,273	0/1:28,0:28:99:276,0,506	0/1:21,0:21:99:267,0,106	1/1:1,20:21:27.09:485,27,0	1/1:0,15:15:12.04:216,12,0	1/1:22,0:22:5.95:56,6,0	1/1:4,10:14:12.61:237,13,0	0/1:22,0:22:76.78:266,0,77	0/1:25,0:25:99:187,0,153	0/1:20,0:20:99:169,0,182	0/1:26,0:26:74.30:197,0,74	0/0:29,0:29:68.91:0,69,674	0/0:12,0:12:26:0,26,220	1/1:3,24:27:19.05:424,19,0	0/1:33,0:33:99:211,0,486	0/1:25,0:25:90.91:91,0,130	0/1:12,0:12:3.35:147,0,3
chr10	36189598	.	G	GTCTA	3670.68	PASS	AB=0.902;AC=20;AF=0.357;AN=56;BaseQRankSum=-3.675;DP=626;FS=11.110;HRun=0;HaplotypeScore=151.4736;InbreedingCoeff=0.5245;MQ=67.27;MQ0=3;MQRankSum=-2.408;QD=11.69;ReadPosRankSum=-3.390;VQSLOD=2.1255;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:23.94:0,24,198	0/0:7,0:7:18:0,18,153	0/0:20,0:16:38.76:0,39,672	0/0:17,0:13:36.05:0,36,562	0/0:32,0:33:40.50:0,40,327	0/0:25,0:25:35.97:0,36,309	0/0:8,0:8:5.98:0,6,46	1/1:32,0:30:13.68:72,14,0	0/0:18,0:18:35.92:0,36,293	0/1:33,0:33:1.80:2,0,280	0/0:26,0:26:26.99:0,27,230	0/1:16,0:16:20.95:21,0,315	0/1:27,1:28:46.47:46,0,379	1/1:18,5:23:20.49:440,20,0	0/0:20,0:20:26.97:0,27,226	0/0:16,0:16:11.94:0,12,95	0/0:2,0:21:2.68:0,3,25	0/0:13,0:13:12.46:0,12,100	1/1:17,4:21:11.80:339,12,0	1/1:12,14:26:22.99:556,23,0	0/1:16,4:20:1.54:394,0,2	1/1:25,0:29:20.48:255,20,0	0/0:28,0:28:34.50:0,34,932	0/1:13,0:13:39.55:40,0,309	0/0:27,0:26:24.25:0,24,228	0/1:13,20:35:27.82:986,0,28	1/1:8,16:25:18.52:422,19,0	1/1:12,1:13:7.41:98,7,0
chr10	36189602	.	G	GTCTATCTATCTA	2529.51	PASS	AB=1.000;AC=24;AF=0.462;AN=52;BaseQRankSum=-1.210;DP=644;FS=6.623;HRun=0;HaplotypeScore=234.1583;InbreedingCoeff=0.6664;MQ=65.25;MQ0=4;MQRankSum=0.506;QD=7.71;ReadPosRankSum=-2.776;VQSLOD=1.3377;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:29.82:0,30,616	0/0:7,0:7:18.06:0,18,501	./.	./.	0/0:32,0:32:43.33:0,43,1022	0/0:25,0:25:45.05:0,45,1007	0/0:8,0:8:5.97:0,6,105	1/1:36,0:33:18.76:138,19,0	0/0:19,0:19:36.02:0,36,803	0/0:33,0:33:47.96:0,48,1052	0/0:27,0:27:30.09:0,30,743	1/1:8,8:23:6.02:347,6,0	0/1:32,0:32:34.47:34,0,1009	1/1:25,0:25:30.88:266,31,0	0/0:22,0:22:33.08:0,33,732	0/0:16,0:16:11.93:0,12,234	0/0:20,0:20:2.80:0,3,42	0/0:12,0:12:1.88:0,2,200	1/1:21,0:21:13.99:101,14,0	1/1:25,0:25:27.05:142,27,0	1/1:21,0:21:22.54:180,23,0	1/1:28,0:28:29.95:568,30,0	1/1:24,0:31:3.01:76,3,0	1/1:15,0:15:3.01:91,3,0	0/0:26,0:25:2.96:0,3,586	0/1:34,0:34:99:368,0,116	1/1:23,0:23:21.96:122,22,0	1/1:14,0:14:14.62:290,15,0
chr10	36189912	.	GA	G	9277.24	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=9.618;DP=575;FS=1.566;HRun=8;HaplotypeScore=60.1761;InbreedingCoeff=0.9975;MQ=77.87;MQ0=0;MQRankSum=-1.119;QD=23.85;ReadPosRankSum=1.874;VQSLOD=5.6195;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,42:47:99:1043,108,0	1/1:0,8:8:20.97:203,21,0	0/0:18,0:16:38.95:0,39,401	0/0:15,0:14:21.04:0,21,229	0/0:25,0:25:69.20:0,69,824	1/1:1,19:19:48.08:463,48,0	1/1:1,16:17:45.07:435,45,0	1/1:1,25:26:75.07:707,75,0	0/0:23,0:23:60.12:0,60,689	1/1:1,20:21:60.08:574,60,0	1/1:2,19:21:54.03:511,54,0	0/0:18,0:18:45.13:0,45,533	1/1:3,14:17:33.05:319,33,0	1/1:1,20:21:48.08:463,48,0	1/1:1,26:27:72.12:695,72,0	0/0:25,0:25:72.19:0,72,837	0/0:25,0:25:75.22:0,75,895	1/1:3,13:16:39.06:376,39,0	1/1:1,8:9:24.03:226,24,0	1/1:2,24:26:72.12:695,72,0	1/1:1,25:26:63.10:608,63,0	1/1:1,14:15:27.03:261,27,0	0/0:8,0:8:24.07:0,24,290	0/0:29,0:29:78.22:0,78,930	1/1:1,17:18:51.08:492,51,0	1/1:2,17:19:51.05:481,51,0	1/1:2,24:26:51.08:492,51,0	1/1:0,9:9:24.04:232,24,0
chr10	36190130	.	C	CAAAAA	5891.75	PASS	AB=0.809;AC=43;AF=0.768;AN=56;BaseQRankSum=-2.965;DP=532;FS=17.965;HRun=17;HaplotypeScore=114.5187;InbreedingCoeff=0.3276;MQ=45.25;MQ0=30;MQRankSum=-4.219;QD=12.27;ReadPosRankSum=-0.426;VQSLOD=-0.2027;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:21:41.19:424,41,0	1/1:3,2:5:8.39:123,8,0	0/0:7,0:2:2.43:0,2,37	0/0:5,0:6:15.51:0,16,110	0/1:19,1:28:71.82:141,0,72	1/1:13,2:15:29.94:402,30,0	1/1:18,1:18:29.83:318,30,0	1/1:29,0:28:47.89:468,48,0	0/1:6,0:22:17.92:18,0,26	1/1:28,0:27:49.91:517,50,0	1/1:9,13:21:8.24:138,8,0	0/1:14,0:15:20.72:21,0,104	1/1:2,7:10:5.38:63,5,0	1/1:18,0:15:23.32:174,23,0	1/1:15,1:17:38.26:433,38,0	0/0:7,0:18:0.76:0,1,61	0/1:16,0:30:20.26:53,0,20	1/1:21,1:21:30.01:376,30,0	1/1:19,0:19:44.92:500,45,0	1/1:16,0:25:26.91:321,27,0	1/1:3,0:2:2.80:6,3,0	1/1:5,1:17:13.59:210,14,0	0/1:12,0:13:7.91:8,0,79	0/0:15,0:14:7.23:0,7,113	1/1:9,2:29:19.24:263,19,0	1/1:7,10:21:32.86:368,33,0	1/1:19,0:19:38.88:425,39,0	1/1:9,1:16:6.02:121,6,0
chr10	36190956	.	GAGA	G	12285.93	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=14.082;DP=686;FS=19.588;HRun=0;HaplotypeScore=150.2590;InbreedingCoeff=0.9571;MQ=64.52;MQ0=1;MQRankSum=-3.663;QD=31.42;ReadPosRankSum=4.833;VQSLOD=4.0273;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:98.40:0,98,1848	1/1:0,4:4:2.61:46,3,0	0/0:35,0:28:55.76:0,56,963	0/0:40,0:29:44.76:0,45,925	0/0:19,0:19:54.18:0,54,1092	1/1:4,19:23:48.16:735,48,0	1/1:4,16:20:27.09:413,27,0	1/1:8,22:30:66.12:880,66,0	0/0:32,0:32:93.28:0,93,1833	1/1:10,26:35:81.20:1168,81,0	1/1:2,14:16:36.07:524,36,0	0/0:25,0:25:72.16:0,72,1277	1/1:5,23:28:60.19:889,60,0	1/1:3,19:22:48.16:735,48,0	1/1:4,25:29:60.20:909,60,0	0/0:26,0:26:75.23:0,75,1509	0/0:29,0:29:75.10:0,75,1447	1/1:2,10:13:6.47:263,6,0	1/1:5,6:11:18.03:215,18,0	1/1:1,16:17:51.04:715,51,0	1/1:5,18:23:30.10:460,30,0	1/1:3,17:20:45.15:689,45,0	0/0:14,0:14:33.10:0,33,643	0/0:35,0:35:93.31:0,93,1869	1/1:1,16:17:42.14:633,42,0	1/1:2,25:27:75.19:1059,75,0	1/1:2,33:35:75.15:1137,75,0	1/1:0,20:20:57.11:813,57,0
chr10	36191538	.	CA	C	1797.35	PASS	AB=0.933;AC=11;AF=0.196;AN=56;BaseQRankSum=-7.338;DP=538;FS=2.723;HRun=10;HaplotypeScore=156.4943;InbreedingCoeff=0.6856;MQ=67.44;MQ0=0;MQRankSum=9.449;QD=13.12;ReadPosRankSum=7.516;VQSLOD=1.6823;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:34.98:0,35,217	0/0:5,0:10:17.31:0,17,98	0/1:18,0:19:25.16:25,0,113	0/1:11,1:11:4.29:4,0,172	1/1:2,25:27:74.98:651,75,0	0/0:12,0:17:29.02:0,29,159	0/0:9,0:15:35:0,35,214	0/0:22,0:28:56.34:0,56,350	1/1:1,18:19:50.99:443,51,0	0/0:21,0:28:50.89:0,51,301	0/0:19,0:22:44.65:0,45,253	0/0:22,0:22:60.14:0,60,654	0/0:18,0:21:34.97:0,35,194	0/0:14,0:18:40.57:0,41,247	0/0:15,0:23:39.67:0,40,231	1/1:7,18:25:50.97:443,51,0	1/1:3,18:21:44.88:391,45,0	0/0:9,0:13:30.21:0,30,161	0/0:13,0:18:35.14:0,35,221	0/0:14,0:21:49.59:0,50,277	0/0:7,0:9:11.67:0,12,72	0/0:11,0:17:26.86:0,27,144	0/0:28,0:28:66.15:0,66,718	0/1:12,2:14:10.04:10,0,342	0/0:17,0:17:50.04:0,50,320	0/0:18,0:25:54.76:0,55,326	0/0:17,0:20:44.01:0,44,271	0/0:6,0:10:25.32:0,25,139
chr10	36191654	.	AGAGG	A	17346.96	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=6.271;DP=561;FS=9.431;HRun=0;HaplotypeScore=115.8875;InbreedingCoeff=0.9919;MQ=92.09;MQ0=0;MQRankSum=-9.319;QD=40.25;ReadPosRankSum=3.428;VQSLOD=5.1678;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,29:30:66.18:1174,66,0	1/1:1,8:9:21.07:387,21,0	0/0:29,0:26:60.17:0,60,1350	0/0:44,0:36:89.36:0,89,1967	1/1:2,16:18:39.13:691,39,0	1/1:3,10:13:21.07:391,21,0	1/1:2,19:21:28.68:864,29,0	1/1:2,23:25:69.17:1175,69,0	1/1:2,22:24:57.20:1048,57,0	1/1:1,12:13:35.83:605,36,0	1/1:1,12:13:36.08:581,36,0	0/0:23,0:23:60.20:0,60,1513	1/1:0,19:19:39.13:723,39,0	1/1:2,23:25:60.21:1118,60,0	1/1:2,20:22:45.08:840,45,0	1/1:0,15:15:45.15:839,45,0	1/1:2,23:25:60.21:1119,60,0	1/1:1,18:19:39.13:724,39,0	1/1:3,9:12:27:368,27,0	1/1:2,7:9:15.05:275,15,0	1/1:3,29:32:53.25:992,53,0	1/1:1,11:12:20.66:373,21,0	0/0:9,0:9:21.06:0,21,506	0/0:25,0:25:75.24:0,75,1903	1/1:3,15:18:39.13:666,39,0	1/1:2,16:18:51.12:883,51,0	1/1:3,20:23:45.15:837,45,0	1/1:2,14:16:36.12:672,36,0
chr10	36191659	.	GAGGA	G	9692.04	PASS	AB=0.984;AC=42;AF=0.750;AN=56;BaseQRankSum=10.211;DP=550;FS=12.024;HRun=0;HaplotypeScore=141.5395;InbreedingCoeff=0.5434;MQ=90.23;MQ0=0;MQRankSum=-8.747;QD=22.75;ReadPosRankSum=6.844;VQSLOD=3.1419;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:31,0:31:7.19:648,7,0	1/1:8,0:8:21.06:251,21,0	0/0:27,0:24:66.03:0,66,1430	0/0:43,0:35:85.37:0,85,2027	1/1:16,2:18:39.06:448,39,0	1/1:12,0:12:3.08:228,3,0	1/1:21,0:21:4.65:495,5,0	1/1:25,0:25:9.16:612,9,0	1/1:22,0:22:57.14:625,57,0	0/1:14,1:15:8.01:287,0,8	1/1:13,0:13:32.96:322,33,0	0/0:21,0:21:60.20:0,60,1543	1/1:20,0:20:17.11:413,17,0	1/1:25,0:25:30.19:644,30,0	1/1:21,0:21:29.94:448,30,0	1/1:16,0:16:30.12:456,30,0	1/1:25,0:25:20.15:580,20,0	1/1:19,0:19:39.09:413,39,0	0/1:12,0:12:39.63:148,0,40	0/1:9,0:9:29.95:148,0,30	1/1:30,0:30:19.81:545,20,0	1/1:11,0:11:3.73:225,4,0	0/0:8,0:8:21.07:0,21,545	0/0:25,0:25:72.23:0,72,1883	1/1:17,0:17:39.04:404,39,0	1/1:17,0:17:45.58:513,46,0	1/1:22,1:23:12.14:487,12,0	0/1:16,0:16:8.88:352,0,9
chr10	36198859	.	C	CT	6476.04	PASS	AB=0.631;AC=47;AF=0.839;AN=56;BaseQRankSum=-1.199;DP=508;FS=36.109;HRun=10;HaplotypeScore=122.3778;InbreedingCoeff=0.6055;MQ=65.60;MQ0=7;MQRankSum=-3.321;QD=14.65;ReadPosRankSum=-1.017;VQSLOD=2.4817;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,1:34:68.84:0,69,566	0/1:4,3:7:55.84:78,0,56	0/0:14,0:10:8.77:0,9,75	0/0:16,0:15:16.65:0,17,123	1/1:16,0:18:30.90:150,31,0	1/1:9,8:17:33.04:334,33,0	1/1:12,12:24:26.80:387,27,0	1/1:17,10:26:59.77:553,60,0	1/1:9,0:10:12.95:65,13,0	0/1:8,14:21:1.10:392,0,1	1/1:6,12:18:48.05:488,48,0	1/1:14,0:14:12.67:64,13,0	1/1:7,6:12:20.98:200,21,0	1/1:12,6:19:38.80:347,39,0	1/1:9,5:14:14.97:136,15,0	1/1:11,0:11:10.31:44,10,0	1/1:15,0:19:26.29:142,26,0	1/1:10,12:22:48.03:474,48,0	1/1:10,13:23:41.32:422,41,0	1/1:11,5:14:17.25:159,17,0	0/1:4,10:14:0.60:175,0,1	1/1:12,9:20:14.29:306,14,0	1/1:9,0:19:20.26:102,20,0	1/1:12,0:11:4.94:23,5,0	1/1:14,10:24:48.04:484,48,0	1/1:12,16:28:13.65:528,14,0	1/1:8,11:19:30:295,30,0	1/1:2,4:4:12.03:128,12,0
chr10	36199421	.	GAACAA	G	3012.97	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=11.005;DP=716;FS=2.347;HRun=0;HaplotypeScore=135.2530;InbreedingCoeff=0.9180;MQ=79.23;MQ0=4;MQRankSum=-0.229;QD=32.40;ReadPosRankSum=1.836;VQSLOD=3.8388;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:93.26:0,93,2382	0/0:8,0:8:15.05:0,15,410	0/0:49,0:33:22.55:0,23,416	0/0:58,0:41:42.59:0,43,1003	1/1:7,22:29:54.18:970,54,0	0/0:21,1:22:0.67:0,1,1499	0/0:18,0:18:45.15:0,45,1298	0/0:31,0:31:48.16:0,48,1349	1/1:7,13:20:33.11:619,33,0	0/0:26,0:26:63.22:0,63,1729	0/0:25,0:25:54.19:0,54,1518	0/0:21,0:21:45.15:0,45,1293	0/0:23,0:23:48.15:0,48,1277	0/0:16,0:16:39.13:0,39,1005	0/0:22,0:22:42.13:0,42,1137	1/1:5,15:20:36.12:678,36,0	1/1:5,19:24:48.16:904,48,0	0/0:25,0:25:58.40:0,58,1500	0/0:24,0:24:42.14:0,42,1171	0/0:30,0:30:9.87:0,10,1390	0/0:22,0:22:54.19:0,54,1493	0/0:16,0:16:36.12:0,36,1002	0/0:32,0:32:81.26:0,81,2207	0/0:27,0:27:57.18:0,57,1584	0/0:20,0:20:33.11:0,33,916	0/0:28,0:28:66.23:0,66,1874	0/0:28,0:28:66.23:0,66,1818	0/0:11,0:11:24.08:0,24,652
chr10	36199787	.	AAC	A	1538.86	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=8.085;DP=788;FS=0.000;HRun=0;HaplotypeScore=89.4748;InbreedingCoeff=0.9995;MQ=86.26;MQ0=0;MQRankSum=-4.194;QD=35.79;ReadPosRankSum=2.715;VQSLOD=5.9144;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,43:43:99:1634,114,0	0/0:11,0:11:30.10:0,30,548	0/0:21,0:21:57.20:0,57,1034	0/0:31,0:31:87.28:0,87,1500	0/0:37,0:37:99:0,108,1968	0/0:24,0:24:69.24:0,69,1265	0/0:17,0:16:48.13:0,48,846	0/0:35,0:35:93.32:0,93,1697	0/0:30,0:30:90.31:0,90,1641	0/0:33,0:33:96.33:0,96,1760	0/0:22,0:22:63.22:0,63,1155	0/0:29,0:29:84.29:0,84,1533	0/0:29,0:29:87.30:0,87,1592	0/0:18,0:18:54.19:0,54,989	0/0:30,0:30:90.31:0,90,1649	0/0:19,0:19:54.19:0,54,990	0/0:28,0:28:81.28:0,81,1485	0/0:29,0:29:84.29:0,84,1528	0/0:29,0:29:75.25:0,75,1337	0/0:30,0:30:90.31:0,90,1650	0/0:46,0:46:99:0,132,2420	0/0:24,0:24:69.24:0,69,1243	0/0:29,0:29:78.27:0,78,1403	0/0:35,0:35:99:0,102,1849	0/0:16,0:16:48.16:0,48,880	0/0:47,0:47:99:0,135,2437	0/0:23,0:23:66.23:0,66,1208	0/0:23,0:23:63.22:0,63,1154
chr10	36201269	.	GAGGGATACTTGTA	G	9070.38	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=13.987;DP=793;FS=6.477;HRun=0;HaplotypeScore=306.2176;InbreedingCoeff=1.0000;MQ=79.74;MQ0=0;MQRankSum=-14.147;QD=92.55;ReadPosRankSum=0.507;VQSLOD=3.7247;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,163,10145	0/0:13,0:13:36.12:0,36,2224	0/0:27,0:27:75.26:0,75,3161	0/0:21,0:21:54.12:0,54,2398	1/1:1,23:26:60.21:2381,60,0	0/0:19,0:19:51.18:0,51,3249	0/0:30,0:30:90.31:0,90,5377	0/0:25,0:25:72.24:0,72,3862	1/1:2,20:22:51.18:2055,51,0	0/0:29,0:29:87.30:0,87,5145	0/0:20,0:20:60.21:0,60,3671	0/0:35,0:35:99:0,102,6625	0/0:30,0:30:84.29:0,84,5118	0/0:34,0:34:99:0,99,6375	0/0:36,0:36:99:0,99,6174	1/1:2,28:30:72.25:2903,72,0	1/1:1,19:20:45.15:1731,45,0	0/0:31,0:31:93.32:0,93,5772	0/0:16,0:16:45.15:0,45,2568	0/0:30,0:30:87.30:0,87,5003	0/0:51,0:51:99:0,142,8793	0/0:28,0:28:81.28:0,81,5110	0/0:23,0:23:69.24:0,69,4369	0/0:33,0:33:99:0,99,6074	0/0:23,0:23:69.24:0,69,4438	0/0:34,0:34:99:0,99,6190	0/0:34,0:33:99:0,99,6102	0/0:18,0:18:54.17:0,54,3369
chr10	36202722	.	TGTGTGTGTGTGC	T	2414.58	PASS	AB=0.994;AC=17;AF=0.304;AN=56;BaseQRankSum=0.412;DP=746;FS=11.012;HRun=0;HaplotypeScore=245.4595;InbreedingCoeff=-0.0784;MQ=54.82;MQ0=10;MQRankSum=-1.455;QD=5.93;ReadPosRankSum=-0.819;VQSLOD=1.1822;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:84.16:0,84,2887	0/1:13,0:13:39.69:40,0,55	0/0:22,0:12:28.38:0,28,381	0/0:27,0:14:10.07:0,10,196	0/1:25,2:27:41.68:223,0,42	0/0:19,0:19:17.19:0,17,143	0/0:30,0:29:6.40:0,6,146	0/1:30,0:29:99:199,0,275	1/1:27,2:29:1.90:547,2,0	0/1:33,0:33:99:190,0,449	0/0:12,0:12:15.95:0,16,121	0/0:36,0:36:0.18:0,0,193	0/0:21,0:21:13.08:0,13,173	0/0:29,0:29:29.93:0,30,297	0/0:33,0:33:32.70:0,33,274	1/1:26,1:27:18.55:638,19,0	0/1:42,0:42:17.69:216,0,18	0/0:23,0:23:22.93:0,23,197	0/1:12,0:11:38.66:39,0,147	0/0:24,0:24:9.26:0,9,190	0/1:47,0:46:99:107,0,121	0/1:27,0:27:26.90:27,0,193	1/1:14,1:15:3.55:124,4,0	0/1:44,0:44:32.98:169,0,33	0/0:17,0:17:8.82:0,9,65	0/1:36,0:35:49.37:49,0,563	0/1:25,0:25:5.33:5,0,160	0/0:7,0:6:0.37:0,0,87
chr10	36202724	.	TGTGTGTGTGC	T	4715.74	PASS	AB=0.941;AC=31;AF=0.554;AN=56;BaseQRankSum=1.602;DP=743;FS=7.367;HRun=0;HaplotypeScore=221.1778;InbreedingCoeff=-0.2571;MQ=55.31;MQ0=9;MQRankSum=-1.947;QD=7.49;ReadPosRankSum=1.438;VQSLOD=2.2253;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:74.69:0,75,2439	0/1:12,1:13:3.43:130,0,3	0/0:22,0:12:28.37:0,28,372	0/0:25,0:14:12.80:0,13,186	1/1:4,22:26:4.50:422,5,0	1/1:19,0:19:1:2,1,0	0/1:29,0:28:26.86:27,0,53	0/1:29,0:28:99:247,0,162	1/1:4,24:28:18.65:840,19,0	0/1:36,0:36:99:368,0,168	0/1:11,0:11:13.28:13,0,64	0/1:38,0:38:29.05:29,0,44	0/1:21,0:21:33.50:34,0,37	0/0:29,0:29:8.16:0,8,87	0/1:33,0:33:9.12:9,0,58	1/1:2,25:27:41.73:1153,42,0	0/1:10,31:41:31.87:271,0,32	0/1:24,0:24:36.02:36,0,62	0/1:11,0:10:39.38:57,0,39	0/1:24,0:24:3.44:3,0,75	0/1:46,1:46:12.97:151,0,13	0/1:27,1:28:82.91:83,0,93	1/1:1,13:14:8.74:159,9,0	0/1:8,35:43:10.54:320,0,11	1/1:16,0:16:2.76:9,3,0	0/1:39,0:38:99:269,0,110	0/1:26,0:26:40.20:40,0,53	1/1:7,0:6:4.42:44,4,0
chr10	36202726	.	TGTGTGTGC	T	6166.47	PASS	AB=0.987;AC=38;AF=0.679;AN=56;BaseQRankSum=6.189;DP=732;FS=2.125;HRun=0;HaplotypeScore=198.6063;InbreedingCoeff=-0.0510;MQ=56.49;MQ0=9;MQRankSum=-3.420;QD=9.53;ReadPosRankSum=3.739;VQSLOD=3.8015;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:77.85:0,78,2087	1/1:11,2:13:4.19:214,4,0	0/0:24,0:14:34.25:0,34,376	0/0:25,0:14:3.16:0,3,157	1/1:25,1:26:3.14:282,3,0	1/1:20,0:20:13.98:126,14,0	0/1:27,1:27:18.70:40,0,19	0/1:28,0:27:35.01:286,0,35	1/1:27,0:27:9.50:544,10,0	0/1:36,1:37:46.42:672,0,46	0/1:10,0:10:15.10:27,0,15	0/1:34,1:35:7.08:190,0,7	1/1:20,1:21:18.41:219,18,0	0/1:30,0:30:18.35:204,0,18	1/1:28,2:30:8.88:200,9,0	1/1:27,0:27:39.58:721,40,0	0/1:39,1:40:54.72:229,0,55	0/1:22,1:23:26.09:92,0,26	1/1:11,0:10:22.25:194,22,0	0/1:24,0:24:3.75:102,0,4	0/1:44,0:43:15.90:80,0,16	1/1:30,1:31:4.70:161,5,0	1/1:14,0:14:8.88:101,9,0	0/1:41,0:41:40.69:225,0,41	1/1:15,1:16:9.77:111,10,0	0/1:38,0:37:5.74:699,0,6	1/1:25,1:26:20.33:249,20,0	1/1:6,1:6:15.02:195,15,0
chr10	36202728	.	TGTGTGC	T	10262.12	PASS	AB=0.771;AC=46;AF=0.821;AN=56;BaseQRankSum=4.898;DP=721;FS=2.520;HRun=0;HaplotypeScore=169.3987;InbreedingCoeff=0.3988;MQ=57.04;MQ0=7;MQRankSum=-4.991;QD=16.11;ReadPosRankSum=3.362;VQSLOD=4.5358;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:71.83:0,72,1600	1/1:3,10:13:18.05:269,18,0	0/0:27,0:17:36.37:0,36,382	0/0:21,0:13:2.18:0,2,121	1/1:26,0:26:1.65:215,2,0	1/1:1,19:20:14.83:357,15,0	1/1:5,23:27:11.69:183,12,0	1/1:4,22:25:57.25:541,57,0	1/1:27,0:27:8.08:427,8,0	1/1:31,4:35:40.55:968,41,0	1/1:1,8:9:2.33:122,2,0	1/1:3,32:35:24.08:494,24,0	1/1:2,18:20:20.61:455,21,0	1/1:2,26:29:17.14:657,17,0	1/1:3,27:30:26.91:559,27,0	1/1:27,0:27:38.88:558,39,0	0/1:40,0:40:51.66:179,0,52	0/1:3,18:21:6.90:187,0,7	1/1:1,9:9:26.98:334,27,0	1/1:4,20:24:27.74:448,28,0	1/1:9,35:43:5.75:49,6,0	0/1:5,26:31:2.40:348,0,2	1/1:14,0:14:8.85:87,9,0	0/1:41,0:41:3.14:161,0,3	1/1:3,11:15:8.55:168,9,0	1/1:27,11:38:99:1596,104,0	1/1:4,23:27:32.47:557,32,0	1/1:2,5:6:15.05:345,15,0
chr10	36202730	.	TGTGC	T	6665.77	PASS	AB=0.964;AC=46;AF=0.821;AN=56;BaseQRankSum=7.077;DP=711;FS=1.092;HRun=0;HaplotypeScore=167.0924;InbreedingCoeff=0.4266;MQ=58.78;MQ0=7;MQRankSum=-6.222;QD=10.61;ReadPosRankSum=3.762;VQSLOD=4.0886;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:35:80.77:0,81,1341	1/1:13,0:13:17.87:161,18,0	0/0:26,0:17:29.12:0,29,295	0/0:22,0:14:3.17:0,3,121	1/1:26,0:26:1.91:173,2,0	1/1:20,0:20:14.72:188,15,0	1/1:24,0:26:11.65:97,12,0	1/1:26,0:25:35.51:395,36,0	1/1:27,0:27:8.27:315,8,0	1/1:37,0:37:32.09:793,32,0	0/1:8,1:9:2.08:79,0,2	1/1:33,1:34:23.82:258,24,0	1/1:20,0:20:20.53:250,21,0	1/1:28,0:28:12.44:329,12,0	1/1:29,0:29:26.92:301,27,0	1/1:27,0:27:38.75:422,39,0	0/1:40,0:40:32.13:137,0,32	0/1:20,0:21:3.04:86,0,3	1/1:10,0:9:26.60:225,27,0	1/1:23,1:24:29.85:329,30,0	1/1:42,0:41:5.49:33,5,0	1/1:30,1:31:23.98:279,24,0	1/1:14,0:14:8.88:73,9,0	0/1:39,0:39:11.40:129,0,11	1/1:15,0:15:8.50:96,8,0	1/1:37,0:37:99:1020,102,0	1/1:26,0:26:32.69:303,33,0	1/1:7,0:6:15.05:196,15,0
chr10	36203795	.	GTA	G	1630.57	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=9.956;DP=562;FS=82.850;HRun=0;HaplotypeScore=73.6654;InbreedingCoeff=0.9092;MQ=78.48;MQ0=1;MQRankSum=-9.813;QD=26.30;ReadPosRankSum=0.719;VQSLOD=0.6050;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:90.28:0,90,1749	0/0:9,0:9:27.09:0,27,537	0/0:13,0:14:34.62:0,35,556	0/0:14,0:14:39.05:0,39,674	0/0:0,13:13:0.44:0,0,2	0/0:25,0:25:75.24:0,75,1472	0/0:40,0:40:99:0,120,2398	0/0:27,0:27:81.28:0,81,1632	1/1:0,10:10:21.07:337,21,0	0/0:33,0:33:96.33:0,96,1932	0/0:12,0:12:33.10:0,33,631	1/1:0,14:14:18.06:291,18,0	0/0:22,0:22:66.23:0,66,1335	0/0:21,0:21:63.20:0,63,1222	0/0:34,0:34:99:0,102,1988	1/1:0,17:17:45.15:723,45,0	1/1:0,10:10:21.07:334,21,0	0/0:25,0:25:75.22:0,75,1449	0/0:18,0:18:54.16:0,54,994	0/0:16,0:16:48.16:0,48,968	0/0:39,0:38:99:0,114,2261	0/0:20,0:20:60.21:0,60,1218	1/1:0,11:11:8.99:112,9,0	0/0:0,16:16:0.44:0,0,0	0/0:12,0:12:36.11:0,36,694	0/0:28,0:28:84.28:0,84,1671	0/0:26,0:26:78.27:0,78,1578	0/0:6,0:6:18.06:0,18,364
chr10	36206264	.	G	GT	8768.32	PASS	AB=0.786;AC=36;AF=0.643;AN=56;BaseQRankSum=-1.967;DP=593;FS=0.000;HRun=9;HaplotypeScore=119.8824;InbreedingCoeff=0.8370;MQ=76.92;MQ0=0;MQRankSum=-3.038;QD=22.09;ReadPosRankSum=1.637;VQSLOD=4.0074;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:74.94:0,75,646	1/1:0,7:7:21.06:232,21,0	0/0:22,0:17:29.23:0,29,193	0/1:26,0:21:16.25:16,0,136	0/0:22,0:22:40.24:0,40,475	1/1:4,22:27:36.95:619,37,0	1/1:7,21:28:54.99:586,55,0	1/1:4,24:30:80.84:829,81,0	0/0:24,0:24:52.99:0,53,467	1/1:6,18:24:60.14:644,60,0	1/1:5,15:20:45.12:496,45,0	0/0:20,0:20:53.99:0,54,468	1/1:2,20:22:45.12:496,45,0	0/1:3,9:12:5:178,0,5	1/1:3,15:18:16.06:405,16,0	0/0:16,0:16:41.96:0,42,361	0/0:27,0:27:65.09:0,65,560	1/1:4,30:34:81.22:896,81,0	1/1:4,8:12:4.91:275,5,0	1/1:6,11:17:33.09:365,33,0	1/1:2,11:14:24.19:275,24,0	1/1:7,16:25:52.51:508,53,0	0/0:15,0:15:33.86:0,34,288	0/0:16,1:17:11.76:0,12,321	1/1:3,13:17:18.89:415,19,0	1/1:3,21:25:41.06:630,41,0	1/1:3,23:26:31.11:571,31,0	1/1:2,11:13:30.08:332,30,0
chr10	36206548	.	TACACACACACACACAC	T	7214.41	PASS	AB=0.776;AC=32;AF=0.593;AN=54;BaseQRankSum=9.041;DP=547;FS=12.227;HRun=0;HaplotypeScore=214.8110;InbreedingCoeff=0.5209;MQ=59.87;MQ0=6;MQRankSum=-6.497;QD=23.12;ReadPosRankSum=1.680;VQSLOD=2.5994;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:32:18.06:0,18,971	1/1:2,7:9:15.05:656,15,0	./.	0/0:31,0:17:3.45:0,3,23	0/0:12,0:20:12.04:0,12,726	0/1:15,1:18:28.62:383,0,29	0/1:23,5:28:66.71:125,0,67	1/1:12,3:15:0.19:130,0,0	0/0:15,0:15:18.06:0,18,1114	0/1:7,9:16:4:278,0,4	1/1:9,8:17:15.05:504,15,0	0/0:6,0:13:18.05:0,18,817	1/1:7,1:8:6.01:156,6,0	1/1:9,0:11:3.01:112,3,0	1/1:10,6:17:18.06:728,18,0	0/0:12,0:12:21.54:0,22,1472	0/0:30,0:33:43.93:0,44,2201	1/1:13,8:21:11.75:410,12,0	1/1:13,0:14:3.01:72,3,0	1/1:11,6:17:15.05:656,15,0	1/1:22,6:28:2.70:16,3,0	1/1:9,10:19:9.03:394,9,0	0/0:14,0:14:15.05:0,15,670	0/0:29,0:37:39.10:0,39,1434	1/1:11,10:23:26.12:1036,26,0	0/1:15,7:21:99:494,0,100	1/1:12,7:20:20.67:804,21,0	1/1:5,3:8:6.02:262,6,0
chr10	36210563	.	GTGTT	G	3499.38	PASS	AB=0.952;AC=38;AF=0.679;AN=56;BaseQRankSum=0.753;DP=528;FS=8.355;HRun=0;HaplotypeScore=99.6313;InbreedingCoeff=-0.0791;MQ=47.94;MQ0=21;MQRankSum=1.937;QD=8.23;ReadPosRankSum=-1.904;VQSLOD=1.5584;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:36,0:36:20.01:79,20,0	0/1:9,0:9:45.57:46,0,148	0/0:49,0:12:16.02:0,16,168	0/0:49,0:15:12.16:0,12,175	1/1:16,8:24:44.56:494,45,0	1/1:19,0:18:17.65:108,18,0	0/1:18,0:18:5.04:71,0,5	0/1:20,0:19:99:205,0,134	0/1:8,1:8:15.10:99,0,15	0/1:22,0:21:99:147,0,246	1/1:11,0:11:11.69:68,12,0	1/1:1,17:18:18.06:337,18,0	0/1:16,0:15:24.47:132,0,24	1/1:13,0:13:5.83:35,6,0	1/1:15,0:15:18.94:153,19,0	1/1:0,13:13:2.80:56,3,0	1/1:1,16:17:8.96:130,9,0	0/1:9,0:9:59.05:97,0,59	1/1:7,0:6:0.46:72,0,0	0/1:14,0:14:82.31:82,0,105	1/1:14,0:14:9.69:103,10,0	1/1:27,0:27:31.60:186,32,0	1/1:1,14:15:17.88:316,18,0	0/1:2,18:20:8.91:172,0,9	0/1:19,0:19:21.22:70,0,21	0/1:25,0:25:99:156,0,308	0/1:15,0:15:83.86:84,0,86	0/0:5,0:5:3.01:0,3,40
chr10	36210567	.	T	TTG	4635.73	PASS	AB=0.783;AC=41;AF=0.732;AN=56;BaseQRankSum=-2.855;DP=540;FS=6.987;HRun=0;HaplotypeScore=92.9844;InbreedingCoeff=0.4623;MQ=49.93;MQ0=20;MQRankSum=1.801;QD=12.07;ReadPosRankSum=-1.210;VQSLOD=3.5423;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:37,0:37:25.03:178,25,0	1/1:6,4:10:21.07:290,21,0	0/0:52,0:15:22.85:0,23,295	0/0:52,0:16:29.62:0,30,312	1/1:22,0:22:36.29:341,36,0	1/1:11,7:17:5.97:57,6,0	0/1:16,2:18:26.22:47,0,26	0/1:18,0:17:0.78:483,0,1	1/1:9,1:10:14.84:199,15,0	1/1:21,1:21:30.10:471,30,0	1/1:4,8:12:11.90:111,12,0	0/0:17,0:17:16.52:0,17,74	1/1:18,0:17:29.91:350,30,0	1/1:6,8:14:2.94:18,3,0	1/1:16,0:16:15.05:216,15,0	1/1:13,0:13:2.84:14,3,0	1/1:17,0:17:5.80:33,6,0	1/1:7,1:8:18.06:273,18,0	1/1:8,0:7:15.02:172,15,0	0/1:10,7:17:20.57:108,0,21	1/1:15,0:15:20.28:251,20,0	1/1:8,17:25:30.01:347,30,0	0/0:15,0:15:16.41:0,16,73	0/0:20,0:20:3.95:0,4,27	0/1:8,11:19:9.02:9,0,33	0/1:14,13:27:3.33:430,0,3	1/1:16,0:16:15.50:188,15,0	1/1:0,4:4:3.01:49,3,0
chr10	36210984	.	GGT	G	18812.17	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=15.419;DP=699;FS=2.740;HRun=0;HaplotypeScore=86.4887;InbreedingCoeff=0.9990;MQ=76.74;MQ0=0;MQRankSum=-3.460;QD=45.77;ReadPosRankSum=1.153;VQSLOD=6.2608;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,117,2287	1/1:0,13:13:39.13:634,39,0	0/0:24,0:24:64.15:0,64,1308	0/0:16,0:16:44.36:0,44,821	0/0:21,0:21:57.20:0,57,1158	1/1:0,22:22:66.23:1077,66,0	1/1:0,31:31:87.30:1419,87,0	1/1:0,27:27:81.26:1291,81,0	0/0:26,0:26:78.27:0,78,1576	1/1:0,25:25:72.25:1172,72,0	1/1:0,9:9:24.08:392,24,0	0/0:31,0:31:93.31:0,93,1856	1/1:0,27:27:81.28:1321,81,0	1/1:0,33:33:90.31:1466,90,0	1/1:0,29:29:74.97:1223,75,0	0/0:32,0:31:96.33:0,96,1902	0/0:44,0:44:99:0,132,2664	1/1:0,39:39:99:1859,114,0	1/1:0,22:22:66.12:946,66,0	1/1:0,12:12:30.10:489,30,0	1/1:0,52:52:99:2251,138,0	1/1:0,16:16:48.16:783,48,0	0/0:10,0:10:27.09:0,27,521	0/0:45,0:45:99:0,135,2705	1/1:1,14:15:42.14:685,42,0	1/1:0,20:20:60.20:971,60,0	1/1:0,10:10:24.08:391,24,0	1/1:0,9:9:27.09:440,27,0
chr10	36211811	.	A	AG	4410.55	PASS	AB=0.998;AC=34;AF=0.607;AN=56;BaseQRankSum=-1.241;DP=614;FS=7.809;HRun=2;HaplotypeScore=94.1403;InbreedingCoeff=-0.2228;MQ=79.68;MQ0=0;MQRankSum=-1.541;QD=8.02;ReadPosRankSum=5.244;VQSLOD=2.1131;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:33:37.80:63,0,38	1/1:9,0:9:18:65,18,0	0/0:24,0:23:20.94:0,21,367	0/0:24,0:24:24.14:0,24,292	1/1:0,22:22:63.14:866,63,0	0/1:16,0:16:29.98:30,0,84	1/1:21,0:21:24.88:105,25,0	0/1:28,0:28:47.03:47,0,151	1/1:0,24:24:51.17:731,51,0	0/1:29,0:29:56.01:56,0,147	0/1:18,0:18:53.17:53,0,64	0/0:16,0:16:9.46:0,9,35	0/1:27,0:27:62.68:63,0,109	1/1:14,0:14:3.37:70,3,0	0/1:23,0:23:12.93:89,0,13	1/1:1,14:15:36.11:501,36,0	1/1:2,29:31:63.21:905,63,0	0/1:21,0:21:66.73:73,0,67	0/1:15,0:15:49.32:49,0,58	0/1:26,0:26:42.75:43,0,193	0/1:21,0:21:39.17:39,0,97	0/1:30,0:30:51.95:92,0,52	0/1:23,1:24:20.87:73,0,21	0/1:22,0:22:16.42:48,0,16	0/1:18,0:18:39.38:47,0,39	0/1:22,0:22:47.13:47,0,64	1/1:31,0:31:36.66:169,37,0	1/1:10,0:10:24.06:86,24,0
chr10	36211813	.	G	GA	10353.79	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-13.589;DP=617;FS=19.040;HRun=9;HaplotypeScore=78.1729;InbreedingCoeff=0.9651;MQ=77.84;MQ0=0;MQRankSum=-3.353;QD=21.75;ReadPosRankSum=0.178;VQSLOD=3.6276;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:86.95:0,87,751	1/1:1,8:9:24.06:265,24,0	0/0:20,0:20:4.66:0,5,231	0/0:24,0:24:34.10:0,34,264	1/1:24,0:24:58.05:404,58,0	1/1:5,10:15:27.07:299,27,0	1/1:0,17:18:47.95:504,48,0	1/1:8,21:30:68.93:710,69,0	1/1:23,0:23:49.82:302,50,0	1/1:7,23:31:68.01:696,68,0	1/1:3,17:20:16.06:405,16,0	0/0:16,0:16:47.96:0,48,411	1/1:8,23:31:28.17:538,28,0	1/1:2,11:13:36.10:397,36,0	1/1:2,20:22:37.12:638,37,0	1/1:14,0:15:35.16:212,35,0	1/1:30,0:30:61.60:372,62,0	1/1:6,16:22:19.07:438,19,0	1/1:5,12:17:16.05:398,16,0	1/1:7,19:26:42.07:451,42,0	1/1:6,13:20:41.89:422,42,0	1/1:4,25:29:66.09:702,66,0	0/0:24,0:24:47.79:0,48,517	0/0:22,0:22:56.98:0,57,494	1/1:3,15:18:39.11:431,39,0	1/1:4,19:23:53.82:575,54,0	1/1:1,29:30:78.14:862,78,0	1/1:0,10:10:30.08:332,30,0
chr10	36212552	.	TA	T	6156.06	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=10.845;DP=572;FS=42.255;HRun=1;HaplotypeScore=64.9527;InbreedingCoeff=0.9574;MQ=69.91;MQ0=11;MQRankSum=-0.554;QD=34.98;ReadPosRankSum=1.313;VQSLOD=2.1296;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,17:17:48.16:662,48,0	0/0:8,0:7:0.73:0,1,267	0/0:18,0:16:44.87:0,45,643	0/0:20,0:16:48.16:0,48,747	1/1:0,25:25:72.24:997,72,0	0/0:16,0:16:22.22:0,22,601	0/0:21,0:21:56.59:0,57,883	0/0:33,0:32:89.80:0,90,1374	1/1:0,26:25:69.23:957,69,0	0/0:17,0:17:40.81:0,41,647	0/0:26,0:25:70.18:0,70,1131	1/1:0,14:14:42.14:579,42,0	0/0:14,0:14:33.11:0,33,526	0/0:12,0:12:36.12:0,36,572	0/0:18,0:16:36.43:0,36,615	1/1:0,16:16:48.16:670,48,0	1/1:0,27:25:53.59:790,54,0	0/0:12,0:12:36.08:0,36,545	0/0:23,0:23:64.90:0,65,1008	0/0:24,0:24:61.70:0,62,997	0/0:30,0:29:79.33:0,79,1290	0/0:6,0:6:15.05:0,15,240	1/1:3,21:21:42.14:587,42,0	1/1:0,26:26:66.22:914,66,0	0/0:27,0:27:71.52:0,72,1191	0/0:19,0:18:54.18:0,54,862	0/0:22,0:21:63.21:0,63,981	0/0:30,0:29:87.30:0,87,1374
chr10	36212668	.	T	TATT	4512.55	PASS	AB=1.000;AC=44;AF=0.815;AN=54;BaseQRankSum=7.046;DP=353;FS=5.818;HRun=0;HaplotypeScore=115.2090;InbreedingCoeff=0.6968;MQ=61.31;MQ0=16;MQRankSum=-4.834;QD=15.51;ReadPosRankSum=-0.050;VQSLOD=4.1118;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:15:17.07:252,17,0	1/1:10,0:10:19.28:185,19,0	0/0:12,0:12:9.30:0,9,124	0/0:18,0:12:13.48:0,13,182	0/0:17,0:17:22.20:0,22,174	1/1:16,0:15:38.69:335,39,0	1/1:8,0:8:14.77:95,15,0	1/1:27,0:22:22.74:229,23,0	0/1:20,0:19:1.49:1,0,71	1/1:12,0:10:26.06:269,26,0	1/1:13,0:12:1.91:188,2,0	1/1:2,7:10:6.01:61,6,0	1/1:7,0:6:8.95:85,9,0	1/1:9,0:9:19.23:204,19,0	1/1:7,0:6:17.90:183,18,0	0/1:16,0:16:13.05:13,0,72	0/0:13,0:12:18.62:0,19,120	1/1:6,0:6:14.89:136,15,0	1/1:15,0:15:32.90:322,33,0	1/1:12,0:11:22.09:189,22,0	./.	1/1:7,0:6:10.26:95,10,0	1/1:18,0:17:36.04:404,36,0	1/1:11,0:11:30.07:419,30,0	1/1:13,0:10:22.14:215,22,0	1/1:10,0:8:11.47:102,11,0	1/1:13,0:13:32.72:263,33,0	1/1:15,0:12:29.85:269,30,0
chr10	36212843	.	A	AT	18605.09	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-5.760;DP=486;FS=0.000;HRun=1;HaplotypeScore=43.9866;InbreedingCoeff=0.9955;MQ=74.00;MQ0=0;MQRankSum=-5.957;QD=39.93;ReadPosRankSum=3.150;VQSLOD=5.0329;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,22:22:66.22:988,66,0	1/1:0,8:8:21.07:314,21,0	0/0:11,0:11:27.08:0,27,340	0/0:9,0:9:27.08:0,27,330	1/1:1,34:35:99:1430,99,0	1/1:0,26:26:72.24:1079,72,0	1/1:0,15:15:42.14:629,42,0	1/1:0,41:41:99:1822,123,0	1/1:1,23:24:54.18:809,54,0	1/1:1,20:21:57.19:854,57,0	1/1:0,15:15:30.10:450,30,0	1/1:1,13:14:36.12:540,36,0	1/1:0,13:13:33.11:494,33,0	1/1:0,13:13:39.13:584,39,0	1/1:0,22:22:60.20:899,60,0	1/1:0,16:16:45.15:674,45,0	1/1:0,13:13:39.13:578,39,0	1/1:2,18:20:45.37:710,45,0	1/1:1,15:16:39.13:584,39,0	1/1:0,15:15:42.10:604,42,0	1/1:0,16:16:42.14:629,42,0	1/1:0,12:12:30.10:449,30,0	1/1:1,15:15:36.12:539,36,0	1/1:2,15:17:45.15:674,45,0	1/1:0,10:10:30.10:449,30,0	1/1:1,12:13:36.10:518,36,0	1/1:1,18:19:48.16:719,48,0	1/1:0,14:14:39.13:584,39,0
chr10	36213145	.	C	CA	3183.99	PASS	AB=0.725;AC=31;AF=0.554;AN=56;BaseQRankSum=-10.864;DP=456;FS=4.305;HRun=13;HaplotypeScore=71.4758;InbreedingCoeff=0.3683;MQ=56.01;MQ0=11;MQRankSum=2.026;QD=10.21;ReadPosRankSum=-1.831;VQSLOD=2.7638;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:30:35.50:0,35,103	0/1:5,3:7:29.15:44,0,29	0/1:9,0:5:14.80:15,0,33	0/0:8,0:4:0.32:0,0,1	0/0:6,0:24:35.20:0,35,105	1/1:10,8:18:30.24:252,30,0	1/1:2,8:10:24.03:223,24,0	1/1:11,18:29:0.46:249,0,0	0/0:4,0:11:13.09:0,13,38	0/1:10,10:19:14.16:160,0,14	1/1:7,8:18:1.93:192,2,0	0/0:3,0:10:17.19:0,17,60	0/1:6,6:12:11.52:47,0,12	1/1:2,4:7:8.08:105,8,0	1/1:6,7:13:5.94:104,6,0	0/0:5,0:16:20.35:0,20,60	0/0:6,0:14:16.24:0,16,48	0/1:10,5:17:7.32:117,0,7	1/1:9,11:22:16.33:272,16,0	1/1:7,14:21:6.28:334,6,0	0/1:6,8:15:2.06:108,0,2	1/1:9,10:19:32.87:293,33,0	0/0:4,0:14:20.30:0,20,60	0/0:4,0:12:11.79:0,12,36	1/1:3,5:8:12.01:111,12,0	1/1:8,12:20:18.40:299,18,0	1/1:11,14:25:0.88:290,1,0	0/1:8,6:13:18.14:153,0,18
chr10	36216309	.	C	CTTTATTTTATTTTATTTTAT	14017.63	PASS	AC=48;AF=0.923;AN=52;BaseQRankSum=-2.426;DP=395;FS=12.701;HRun=0;HaplotypeScore=190.6302;InbreedingCoeff=0.3539;MQ=79.78;MQ0=4;MQRankSum=-2.532;QD=42.48;ReadPosRankSum=1.839;VQSLOD=3.4220;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:15:8.70:333,9,0	1/1:7,2:9:13.29:844,13,0	0/0:22,0:22:4.89:0,5,199	0/0:22,0:15:3.76:0,4,79	1/1:17,0:21:18.06:623,18,0	1/1:9,3:13:17.80:1365,18,0	1/1:6,0:4:3.01:85,3,0	1/1:39,0:30:36.11:1590,36,0	1/1:6,0:7:6.02:153,6,0	1/1:8,0:8:6.02:186,6,0	1/1:11,0:11:3.01:214,3,0	1/1:13,0:13:6.01:70,6,0	1/1:6,0:6:3.01:77,3,0	1/1:11,0:11:12.04:771,12,0	1/1:13,0:13:6.02:126,6,0	1/1:8,0:8:6.01:135,6,0	1/1:9,0:14:15.05:493,15,0	1/1:15,0:15:21.07:1535,21,0	1/1:12,0:12:15.05:916,15,0	1/1:8,2:12:12.04:683,12,0	./.	./.	1/1:20,0:20:5.98:105,6,0	1/1:7,0:8:4.83:166,5,0	1/1:12,0:15:15.05:895,15,0	1/1:16,4:19:20.25:1203,20,0	1/1:14,0:14:18.04:1170,18,0	1/1:19,0:19:3.01:279,3,0
chr10	36216441	.	TTGTGTGTG	T	812.46	PASS	AB=0.896;AC=23;AF=0.523;AN=44;BaseQRankSum=2.232;DP=387;FS=1.220;HRun=0;HaplotypeScore=88.0856;InbreedingCoeff=0.3642;MQ=72.24;MQ0=21;MQRankSum=-1.496;QD=4.67;ReadPosRankSum=-1.189;VQSLOD=1.5461;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:31:3.01:36,3,0	1/1:1,0:2:3.01:56,3,0	./.	./.	0/0:10,0:8:3.01:0,3,90	1/1:13,4:17:4.37:72,4,0	0/1:18,1:20:99:181,0,105	0/0:21,0:19:0.89:0,1,2	0/0:11,0:10:6.49:0,6,201	0/0:9,0:7:3.01:0,3,42	./.	0/0:7,0:7:3.01:0,3,63	1/1:4,1:5:3.01:74,3,0	1/1:10,0:10:5.70:82,6,0	1/1:6,1:8:6.02:130,6,0	0/0:8,0:8:9.03:0,9,280	0/0:32,0:29:45.12:0,45,1447	0/1:10,4:12:97.82:139,0,98	1/1:7,3:9:2.96:20,3,0	./.	1/1:41,0:39:4.25:30,4,0	1/1:6,0:5:6:54,6,0	0/0:7,0:6:3.01:0,3,87	0/0:23,0:23:33.11:0,33,1240	./.	0/1:6,0:6:0:0,0,0	1/1:3,0:3:6.01:78,6,0	./.
chr10	36218852	.	GGTGTGT	G	1191.45	PASS	AB=0.824;AC=28;AF=0.560;AN=50;BaseQRankSum=-0.591;DP=584;FS=11.453;HRun=0;HaplotypeScore=126.1006;InbreedingCoeff=0.3904;MQ=62.94;MQ0=16;MQRankSum=-4.114;QD=3.83;ReadPosRankSum=0.459;VQSLOD=1.7292;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:30:14.02:0,14,385	1/1:2,0:5:6.01:67,6,0	./.	./.	0/0:10,0:12:9.01:0,9,101	1/1:11,0:13:3.01:42,3,0	1/1:20,4:25:5.95:78,6,0	0/0:25,0:24:2.44:0,2,6	0/0:21,0:24:18.04:0,18,270	1/1:25,0:25:6.02:82,6,0	1/1:4,4:7:5.97:52,6,0	0/0:11,0:13:14.94:0,15,235	0/0:10,0:12:0.92:0,1,21	1/1:17,5:23:8.98:104,9,0	1/1:17,0:17:5.98:81,6,0	0/0:22,0:32:24.04:0,24,298	0/1:17,0:28:35.08:35,0,337	1/1:14,2:16:5.97:79,6,0	1/1:21,1:21:3.01:61,3,0	1/1:9,3:12:8.94:100,9,0	0/1:56,0:55:21.46:21,0,33	./.	0/0:19,0:20:11.57:0,12,182	0/0:25,0:35:9.50:0,10,216	1/1:10,1:10:3.01:60,3,0	0/1:14,5:18:53.22:108,0,53	1/1:11,7:18:14.65:221,15,0	0/1:8,3:11:19.88:170,0,20
chr10	36218895	.	GTGTGTA	G	190.46	PASS	AB=0.972;AC=9;AF=0.161;AN=56;BaseQRankSum=7.202;DP=526;FS=13.799;HRun=0;HaplotypeScore=108.7422;InbreedingCoeff=-0.2106;MQ=52.16;MQ0=16;MQRankSum=-4.487;QD=1.67;ReadPosRankSum=2.612;VQSLOD=1.1564;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:47.67:0,48,705	0/1:8,0:7:15.41:15,0,61	0/0:25,0:7:4.78:0,5,96	0/0:31,0:7:14.95:0,15,123	0/0:16,0:16:25.96:0,26,378	0/0:10,0:10:1.88:0,2,151	0/0:25,0:25:18.68:0,19,417	0/0:21,0:21:62.78:0,63,527	0/0:13,0:13:24.04:0,24,334	0/0:23,0:22:1.77:0,2,349	0/0:14,0:14:12.89:0,13,238	0/0:15,0:14:26.04:0,26,374	0/0:8,0:8:14.63:0,15,140	0/0:21,0:20:0.88:0,1,298	0/1:12,6:18:37.93:38,0,210	0/0:29,0:29:57.05:0,57,833	0/0:30,0:29:23.69:0,24,809	0/1:14,0:14:2.49:2,0,229	0/1:11,0:11:18.91:19,0,192	0/1:7,0:6:28.62:29,0,68	0/0:46,0:46:73.66:0,74,775	0/0:8,0:7:11.55:0,12,106	0/0:12,0:11:26.77:0,27,284	0/0:36,0:36:56.94:0,57,602	0/1:12,0:12:10.25:10,0,195	0/1:19,0:17:0.58:1,0,305	0/1:15,0:15:99:103,0,146	0/1:10,0:10:98.86:99,0,122
chr10	36219957	.	C	CT	14816.29	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-15.303;DP=588;FS=1.379;HRun=1;HaplotypeScore=54.4421;InbreedingCoeff=0.9798;MQ=84.16;MQ0=0;MQRankSum=-2.511;QD=41.27;ReadPosRankSum=0.915;VQSLOD=5.2754;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,153,1984	1/1:0,4:4:12.04:179,12,0	0/0:22,0:22:63.18:0,63,793	0/0:18,0:18:48.04:0,48,577	0/0:18,0:18:48.16:0,48,623	1/1:0,17:17:51.17:764,51,0	1/1:2,28:30:78.26:1169,78,0	1/1:2,22:24:69.18:967,69,0	0/0:17,0:17:51.17:0,51,662	1/1:0,27:27:81.26:1193,81,0	1/1:1,13:14:36.12:539,36,0	0/0:17,0:17:51.15:0,51,648	1/1:1,15:16:45.15:674,45,0	1/1:1,22:23:63.21:944,63,0	1/1:0,12:12:36.12:540,36,0	0/0:13,0:13:39.13:0,39,506	0/0:23,0:23:63.19:0,63,803	1/1:0,23:23:54.18:809,54,0	1/1:1,25:26:78.26:1148,78,0	1/1:1,13:14:39.13:585,39,0	1/1:1,45:46:99:1888,126,0	1/1:0,14:14:42.14:629,42,0	0/0:16,0:16:48.16:0,48,622	0/0:34,0:34:96.31:0,96,1246	1/1:0,10:10:27.09:404,27,0	1/1:0,29:29:87.29:1303,87,0	1/1:0,26:26:66.22:989,66,0	1/1:2,2:4:6.02:90,6,0
chr10	36221125	.	GTGTGTGTCTTC	G	25437.16	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=14.902;DP=970;FS=5.993;HRun=0;HaplotypeScore=302.1342;InbreedingCoeff=0.9720;MQ=56.60;MQ0=4;MQRankSum=-12.548;QD=37.74;ReadPosRankSum=1.047;VQSLOD=3.6903;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:57:99:0,148,6207	1/1:3,7:10:18.06:577,18,0	0/0:63,0:45:76.08:0,76,1959	0/0:68,0:55:9.96:0,10,1304	1/1:14,16:30:32.89:735,33,0	1/1:8,23:30:51.18:1503,51,0	1/1:13,22:35:39.05:1124,39,0	1/1:23,12:35:36.01:931,36,0	1/1:8,15:23:30.10:946,30,0	1/1:15,30:45:86.40:2431,86,0	1/1:5,12:17:20.69:319,21,0	0/0:28,0:28:72.25:0,72,3318	1/1:7,22:29:48.64:1555,49,0	1/1:9,31:40:66.23:2101,66,0	1/1:12,19:30:36.12:1107,36,0	1/1:13,21:34:45.15:1407,45,0	1/1:10,26:36:30.10:946,30,0	1/1:10,23:33:18.06:525,18,0	1/1:15,6:21:18.03:298,18,0	1/1:11,18:29:50.86:1247,51,0	1/1:24,42:65:23.94:722,24,0	1/1:9,21:30:56.98:1449,57,0	0/0:16,0:16:36.12:0,36,1733	0/0:62,0:62:99:0,148,6788	1/1:3,20:23:42.14:1294,42,0	1/1:10,24:34:72.23:2172,72,0	1/1:11,23:34:54.18:1752,54,0	1/1:2,6:8:9.03:297,9,0
chr10	36221897	.	GA	G	10051.32	PASS	AB=0.885;AC=45;AF=0.804;AN=56;BaseQRankSum=-1.563;DP=619;FS=8.040;HRun=10;HaplotypeScore=71.8264;InbreedingCoeff=0.8810;MQ=79.02;MQ0=0;MQRankSum=-1.915;QD=20.06;ReadPosRankSum=3.210;VQSLOD=5.7678;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:51:99:0,141,1484	1/1:2,5:7:12:104,12,0	0/1:20,3:23:12.38:12,0,279	0/0:18,0:18:32.43:0,32,397	1/1:3,19:22:50.97:443,51,0	1/1:0,20:20:56.99:495,57,0	1/1:4,22:26:59.98:521,60,0	1/1:5,22:27:59.98:521,60,0	1/1:2,23:25:62.98:547,63,0	1/1:2,18:20:53.99:469,54,0	1/1:1,16:17:44.98:391,45,0	0/0:3,0:13:22.76:0,23,114	1/1:2,9:11:26.99:234,27,0	1/1:3,20:23:56.97:495,57,0	1/1:4,20:24:56.99:495,57,0	1/1:2,15:17:44.99:391,45,0	1/1:6,31:37:56.79:722,57,0	1/1:0,15:15:38.99:338,39,0	1/1:2,21:23:62.96:540,63,0	1/1:5,13:18:14.69:288,15,0	1/1:7,30:37:80.97:703,81,0	1/1:0,27:27:74.98:651,75,0	0/0:5,0:13:21.16:0,21,122	0/0:3,0:23:48.92:0,49,249	1/1:5,17:22:20.80:409,21,0	1/1:2,21:23:62.98:547,63,0	1/1:3,20:23:53.99:469,54,0	1/1:2,11:14:32.03:266,32,0
chr10	36222504	.	TCA	T	15632.96	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=11.813;DP=688;FS=0.000;HRun=0;HaplotypeScore=89.6804;InbreedingCoeff=0.9774;MQ=73.12;MQ0=7;MQRankSum=-4.308;QD=30.96;ReadPosRankSum=3.157;VQSLOD=6.7261;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,102,1700	1/1:2,11:12:5.61:249,6,0	0/0:23,0:23:39.39:0,39,568	0/0:30,0:27:69.23:0,69,1130	1/1:1,29:30:84.23:1049,84,0	1/1:3,19:22:54.17:688,54,0	1/1:4,20:24:54.17:688,54,0	1/1:1,22:23:66.21:840,66,0	1/1:4,31:32:81.22:1031,81,0	1/1:0,27:27:75.23:941,75,0	1/1:1,15:16:42.13:534,42,0	0/0:29,0:29:75.26:0,75,1253	1/1:5,19:24:48.13:611,48,0	1/1:1,15:16:42.13:535,42,0	1/1:2,16:18:45.14:573,45,0	1/1:4,20:24:60.19:764,60,0	1/1:1,17:18:39.12:497,39,0	1/1:1,18:19:45.10:555,45,0	1/1:6,17:23:51.16:648,51,0	1/1:1,30:31:87.28:1105,87,0	1/1:2,24:25:60.19:764,60,0	1/1:3,20:23:51.16:649,51,0	0/0:22,0:22:63.22:0,63,1054	0/0:37,0:37:99:0,99,1613	1/1:3,18:21:48.15:611,48,0	1/1:3,27:30:81.23:1003,81,0	1/1:3,18:20:48.15:611,48,0	1/1:3,18:20:54.17:687,54,0
chr10	36224365	.	GACAGACACACAC	G	7484.45	PASS	AB=0.870;AC=45;AF=0.833;AN=54;BaseQRankSum=3.654;DP=548;FS=3.972;HRun=0;HaplotypeScore=152.8133;InbreedingCoeff=0.0579;MQ=53.01;MQ0=21;MQRankSum=-2.808;QD=13.96;ReadPosRankSum=3.388;VQSLOD=3.6285;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:21,0:19:99:103,0,253	1/1:0,11:11:12.24:409,12,0	./.	0/0:9,0:3:8.97:0,9,152	1/1:2,0:18:2.75:17,3,0	1/1:1,15:15:9.03:299,9,0	0/1:5,17:22:13.70:48,0,14	0/1:27,0:18:31.79:417,0,32	0/1:3,0:26:1.92:32,0,2	1/1:3,16:17:32.43:375,32,0	1/1:0,17:17:6.47:163,6,0	0/1:28,0:26:94.05:519,0,94	1/1:0,17:17:15.05:510,15,0	1/1:0,17:18:11.92:329,12,0	1/1:2,17:20:21.07:647,21,0	1/1:1,0:20:4.17:14,4,0	1/1:2,0:24:5.63:31,6,0	1/1:2,13:15:12:209,12,0	1/1:3,9:11:27.06:547,27,0	1/1:4,19:23:15.02:352,15,0	1/1:8,36:39:4.26:55,4,0	1/1:0,8:8:0.47:1,0,0	0/1:21,0:19:99:101,0,130	0/1:38,0:38:4.89:5,0,199	1/1:1,10:11:15.05:370,15,0	1/1:4,17:20:51.08:1127,51,0	1/1:1,29:29:17.88:646,18,0	1/1:5,0:5:12.04:157,12,0
chr10	36224369	.	GACACACACAC	G	4542.41	PASS	AB=0.946;AC=41;AF=0.759;AN=54;BaseQRankSum=2.660;DP=542;FS=1.753;HRun=0;HaplotypeScore=154.9736;InbreedingCoeff=0.2524;MQ=53.15;MQ0=21;MQRankSum=-2.478;QD=9.31;ReadPosRankSum=4.861;VQSLOD=3.5053;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:21:24.07:0,24,473	1/1:11,0:11:11.98:228,12,0	./.	0/0:12,0:5:9.03:0,9,227	0/0:17,0:17:5.36:0,5,22	1/1:15,0:15:9.03:164,9,0	1/1:19,0:19:2.60:10,3,0	0/1:19,0:19:12.71:13,0,109	0/1:28,0:27:15.85:34,0,16	1/1:18,0:16:2.82:11,3,0	1/1:17,0:17:5.37:73,5,0	1/1:10,20:28:43.47:1205,43,0	1/1:17,0:17:15.52:288,16,0	1/1:18,0:18:11.93:196,12,0	1/1:18,0:18:18.53:339,19,0	0/1:19,0:19:1.42:16,0,1	0/1:25,0:24:2.89:14,0,3	0/1:14,0:15:7.36:132,0,7	0/1:11,0:10:12.99:144,0,13	1/1:20,1:22:18.02:275,18,0	1/1:44,0:39:4.19:22,4,0	1/1:8,0:8:0.47:1,0,0	1/1:7,14:19:5.82:158,6,0	1/1:15,20:35:2.64:92,3,0	1/1:11,0:11:12.98:235,13,0	1/1:19,0:18:16.15:517,16,0	1/1:30,0:28:18.01:375,18,0	0/1:6,0:6:1.25:1,0,9
chr10	36225300	.	TAAAA	T	13022.88	PASS	AB=0.544;AC=42;AF=0.750;AN=56;BaseQRankSum=-9.683;DP=534;FS=9.327;HRun=13;HaplotypeScore=99.1400;InbreedingCoeff=0.8258;MQ=56.95;MQ0=2;MQRankSum=-0.902;QD=30.79;ReadPosRankSum=1.447;VQSLOD=3.3783;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:1,0:24:56.55:0,57,348	1/1:1,11:10:21.04:307,21,0	0/0:20,0:12:20.89:0,21,294	0/0:13,0:8:14.96:0,15,220	1/1:3,22:23:51.10:737,51,0	1/1:5,27:32:57.15:834,57,0	0/1:4,10:14:44.96:324,0,45	1/1:4,7:8:12.01:164,12,0	1/1:1,13:14:27.08:395,27,0	1/1:1,29:28:81.27:1183,81,0	1/1:1,22:21:51.15:746,51,0	0/0:7,0:12:18.06:0,18,238	1/1:0,20:19:54.18:790,54,0	1/1:2,10:12:18.05:263,18,0	1/1:1,9:9:21.06:307,21,0	1/1:2,19:21:48.16:695,48,0	1/1:7,15:22:33.07:483,33,0	1/1:4,11:14:36.06:522,36,0	1/1:3,13:14:39.06:508,39,0	1/1:1,25:26:63.16:921,63,0	1/1:1,15:16:33.08:473,33,0	1/1:0,18:18:45.10:648,45,0	0/0:5,0:23:57.16:0,57,709	0/0:3,0:17:45.12:0,45,537	1/1:3,15:20:41.91:578,42,0	1/1:2,28:29:78.23:1139,78,0	0/1:1,21:22:2.71:653,0,3	1/1:2,8:11:25.30:354,25,0
chr10	36226221	.	T	TA	584.09	PASS	AB=0.917;AC=3;AF=0.054;AN=56;BaseQRankSum=-3.923;DP=488;FS=5.594;HRun=9;HaplotypeScore=56.1977;InbreedingCoeff=0.6073;MQ=59.32;MQ0=2;MQRankSum=2.327;QD=14.60;ReadPosRankSum=2.011;VQSLOD=3.5919;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,25:29:62.96:677,63,0	0/0:9,0:9:23.98:0,24,208	0/0:16,0:10:23.96:0,24,203	0/0:7,0:4:5.19:0,5,33	0/0:21,0:21:41.96:0,42,359	0/0:16,0:16:44.99:0,45,391	0/0:11,0:11:23.99:0,24,208	0/0:25,0:23:53.97:0,54,469	0/0:22,0:22:59.97:0,60,521	0/0:24,0:24:65.98:0,66,573	0/0:23,0:23:50.97:0,51,442	0/0:14,0:14:35.98:0,36,308	0/0:8,0:8:24:0,24,208	0/0:15,0:15:35.96:0,36,306	0/0:18,0:18:53.99:0,54,469	0/0:16,0:16:38.98:0,39,338	0/0:34,0:36:83:0,83,709	0/0:14,0:15:32.98:0,33,287	0/0:23,0:23:56.97:0,57,491	0/0:13,0:14:38.02:0,38,318	0/0:10,0:10:23.98:0,24,208	0/0:18,0:18:47.98:0,48,417	0/0:19,0:19:44.94:0,45,381	0/0:6,0:6:15:0,15,130	0/0:14,0:14:29.99:0,30,260	0/0:28,0:28:68.97:0,69,598	0/0:20,0:19:59.95:0,60,512	0/1:10,1:11:9.17:9,0,158
chr10	36226472	.	G	GAAAA	8802.76	PASS	AB=1.000;AC=53;AF=0.946;AN=56;BaseQRankSum=1.727;DP=374;FS=28.975;HRun=9;HaplotypeScore=93.3211;InbreedingCoeff=0.4696;MQ=41.36;MQ0=25;MQRankSum=-3.468;QD=24.18;ReadPosRankSum=2.767;VQSLOD=1.2326;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,0:13:18.06:224,18,0	1/1:1,1:3:8.98:162,9,0	0/0:10,0:8:15.80:0,16,173	0/1:6,0:4:8.87:9,0,79	1/1:5,0:26:42.08:494,42,0	1/1:4,5:7:11.67:280,12,0	1/1:4,2:7:12.04:219,12,0	1/1:14,11:19:40.73:551,41,0	1/1:2,0:11:17.97:203,18,0	1/1:8,8:17:35.10:688,35,0	1/1:8,14:21:30.30:545,30,0	1/1:3,0:7:7.74:78,8,0	1/1:2,6:8:12:236,12,0	1/1:8,3:9:11.42:165,11,0	1/1:0,6:6:15.05:360,15,0	1/1:2,1:10:23.91:292,24,0	1/1:10,2:19:30.04:413,30,0	1/1:5,1:5:14.99:207,15,0	1/1:4,11:14:36:629,36,0	1/1:6,14:19:35.70:642,36,0	1/1:0,5:5:6.02:128,6,0	1/1:2,10:11:18.02:345,18,0	1/1:4,0:12:10.18:97,10,0	1/1:6,0:6:6.41:41,6,0	1/1:8,6:14:15.44:307,15,0	1/1:16,6:23:60.11:896,60,0	1/1:5,8:14:12.04:288,12,0	1/1:13,0:13:27.42:301,27,0
chr10	36226512	.	AC	A	4046.93	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=1.763;DP=414;FS=0.000;HRun=3;HaplotypeScore=107.8024;InbreedingCoeff=0.6038;MQ=52.03;MQ0=43;MQRankSum=-2.050;QD=12.97;ReadPosRankSum=4.658;VQSLOD=2.2751;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:15:36.11:256,36,0	1/1:5,0:4:9.38:65,9,0	0/0:53,0:15:36.25:0,36,272	0/0:49,0:10:3.65:0,4,62	1/1:15,14:27:68.40:506,68,0	1/1:5,2:6:11.11:69,11,0	1/1:5,0:4:5.88:36,6,0	1/1:12,0:7:15.41:120,15,0	1/1:5,4:8:23.89:187,24,0	1/1:14,2:17:27.64:200,28,0	1/1:12,3:15:28.67:179,29,0	1/1:6,2:5:11.21:83,11,0	1/1:9,0:8:7.69:51,8,0	1/1:13,1:14:27.61:163,28,0	1/1:7,1:6:11.81:81,12,0	1/1:5,7:12:29.84:235,30,0	1/1:11,5:12:32.75:240,33,0	1/1:7,0:6:13.90:89,14,0	1/1:21,0:17:41.71:308,42,0	1/1:12,0:12:7.03:111,7,0	1/1:2,0:2:3:25,3,0	1/1:9,0:8:14.11:104,14,0	1/1:11,1:11:16.79:106,17,0	1/1:5,2:5:6.85:51,7,0	1/1:9,3:13:28.03:193,28,0	1/1:21,2:21:56.15:378,56,0	1/1:7,0:7:8.08:36,8,0	1/1:14,0:13:28.22:175,28,0
chr10	36226514	.	CCAAAAA	C	3962.43	PASS	AB=0.973;AC=33;AF=0.589;AN=56;BaseQRankSum=3.595;DP=410;FS=28.452;HRun=0;HaplotypeScore=127.3566;InbreedingCoeff=-0.3081;MQ=51.86;MQ0=46;MQRankSum=-1.266;QD=13.16;ReadPosRankSum=0.270;VQSLOD=1.3588;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,3:14:13.04:239,13,0	0/1:5,0:4:12.98:68,0,13	0/0:55,0:15:24.29:0,24,327	0/0:51,0:11:14.83:0,15,92	1/1:27,1:26:68.65:924,69,0	1/1:7,0:6:13.86:107,14,0	1/1:5,0:4:5.88:36,6,0	0/1:13,0:8:33.97:47,0,34	1/1:7,1:8:23.97:347,24,0	0/1:15,0:14:71.38:107,0,71	0/1:14,0:14:25.72:137,0,26	0/1:7,1:5:15.65:16,0,84	0/1:11,0:9:40.23:40,0,51	0/1:15,0:14:64.06:64,0,66	1/1:7,0:5:1.11:42,1,0	1/1:11,0:11:29.93:460,30,0	1/1:16,0:12:32.83:400,33,0	0/1:8,0:6:13.87:34,0,14	0/1:19,0:15:11.31:134,0,11	0/1:10,0:11:12.67:13,0,55	0/0:3,0:3:0.23:0,0,14	0/1:7,1:7:40.37:48,0,40	0/1:10,0:10:32.22:45,0,32	0/1:7,0:5:16.86:17,0,98	0/1:12,0:13:22.95:184,0,23	0/1:23,0:21:9.10:282,0,9	0/1:6,0:7:8.82:9,0,49	0/1:14,0:13:58.57:161,0,59
chr10	36226521	.	AAAAAAAAAAAAAAAAAAG	A	3872.22	PASS	AB=0.762;AC=7;AF=0.125;AN=56;BaseQRankSum=3.028;DP=449;FS=3.285;HRun=0;HaplotypeScore=203.4534;InbreedingCoeff=0.7246;MQ=56.01;MQ0=49;MQRankSum=-3.543;QD=61.46;ReadPosRankSum=6.242;VQSLOD=3.1109;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:20:48.16:0,48,1879	0/0:3,0:3:9.03:0,9,202	0/0:66,0:16:42.09:0,42,855	0/0:60,0:16:29.49:0,29,472	1/1:13,13:24:52.69:1685,53,0	0/0:8,0:7:17.73:0,18,348	0/0:4,0:3:3.01:0,3,40	0/0:15,0:9:27.08:0,27,896	1/1:4,4:7:17.52:624,18,0	0/0:16,0:15:42.14:0,42,1145	0/0:13,0:13:30.10:0,30,1010	0/0:10,0:7:12.04:0,12,796	0/0:13,0:11:21.07:0,21,794	0/0:15,0:14:36.12:0,36,1174	0/0:7,0:5:12:0,12,238	1/1:6,7:11:29.81:923,30,0	0/1:11,5:13:99:640,0,201	0/0:9,0:7:15.05:0,15,453	0/0:17,0:13:33.11:0,33,974	0/0:12,0:12:30.10:0,30,1077	0/0:5,0:5:11.05:0,11,201	0/0:6,0:5:12.04:0,12,441	0/0:13,0:12:24.08:0,24,880	0/0:8,0:6:12.04:0,12,833	0/0:15,0:14:36.04:0,36,1084	0/0:24,0:22:66.08:0,66,1466	0/0:9,0:9:18.06:0,18,807	0/0:16,0:15:39:0,39,1043
chr10	36226532	.	AAAAAAAG	A	3476.09	PASS	AB=0.986;AC=29;AF=0.518;AN=56;BaseQRankSum=0.771;DP=434;FS=60.124;HRun=0;HaplotypeScore=125.6503;InbreedingCoeff=-0.2425;MQ=53.07;MQ0=44;MQRankSum=0.462;QD=10.13;ReadPosRankSum=2.889;VQSLOD=0.2653;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:19,0:17:6.58:7,0,249	0/1:5,0:5:8.34:92,0,8	0/1:57,0:11:9.81:10,0,114	0/0:54,0:15:13.35:0,13,114	1/1:15,0:14:42.10:670,42,0	1/1:12,1:12:12.42:228,12,0	1/1:6,0:4:5.93:39,6,0	0/1:21,0:12:40.91:41,0,96	1/1:7,0:6:18.02:273,18,0	0/1:19,0:18:17.61:185,0,18	0/1:14,2:16:31.37:208,0,31	0/0:9,0:6:12.04:0,12,247	0/1:12,1:11:43.22:80,0,43	0/1:16,0:15:73.09:101,0,73	0/0:4,0:2:2.94:0,3,18	1/1:10,0:8:24.07:385,24,0	0/1:9,0:6:41.91:238,0,42	0/1:9,0:7:10.29:62,0,10	0/1:17,0:13:32.17:32,0,64	0/1:15,0:15:62.73:63,0,73	1/1:6,0:6:6.99:60,7,0	0/1:5,0:4:14.37:14,0,55	0/0:14,0:13:21.75:0,22,185	0/0:9,0:7:15.03:0,15,297	0/1:15,1:15:47.95:202,0,48	0/1:26,0:24:31.33:293,0,31	0/1:10,0:10:37.24:51,0,37	0/1:13,0:12:54.05:144,0,54
chr10	36228543	.	G	GA	2777.08	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-9.386;DP=613;FS=10.713;HRun=1;HaplotypeScore=64.5752;InbreedingCoeff=0.9996;MQ=60.28;MQ0=1;MQRankSum=2.469;QD=36.54;ReadPosRankSum=1.606;VQSLOD=3.3079;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,116,1453	0/0:17,0:17:45.15:0,45,583	0/0:25,0:17:47.72:0,48,576	0/0:25,0:20:39:0,39,470	1/1:1,18:19:39.09:559,39,0	0/0:20,0:20:54.16:0,54,686	0/0:15,0:15:42.14:0,42,545	0/0:24,0:24:69.22:0,69,895	1/1:1,23:24:72.24:1075,72,0	0/0:23,0:23:69.22:0,69,884	0/0:20,0:20:51.17:0,51,660	0/0:11,0:11:30.10:0,30,389	0/0:17,0:17:45.15:0,45,584	0/0:20,0:20:60.18:0,60,765	0/0:26,0:26:75.24:0,75,973	1/1:1,12:13:36.12:540,36,0	1/1:0,20:20:51.17:764,51,0	0/0:16,0:16:45.02:0,45,543	0/0:25,0:24:63.16:0,63,784	0/0:31,0:31:93.29:0,93,1192	0/0:35,0:35:99:0,102,1323	0/0:21,0:21:44.82:0,45,583	0/0:29,0:29:81.26:0,81,1050	0/0:11,0:11:30.10:0,30,389	0/0:14,0:14:36.12:0,36,467	0/0:27,0:27:81.26:0,81,1048	0/0:29,0:29:75.20:0,75,973	0/0:14,0:14:42.11:0,42,526
chr10	36229599	.	T	TA	16900.42	PASS	AB=1.000;AC=53;AF=0.946;AN=56;BaseQRankSum=-1.484;DP=554;FS=15.784;HRun=6;HaplotypeScore=79.7076;InbreedingCoeff=0.7271;MQ=54.52;MQ0=5;MQRankSum=-2.131;QD=31.24;ReadPosRankSum=3.818;VQSLOD=3.6350;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,23:26:77.87:923,78,0	1/1:3,11:14:30.10:377,30,0	0/1:14,0:9:6.23:6,0,122	0/0:13,0:9:27.02:0,27,255	1/1:0,30:30:72.15:870,72,0	1/1:1,23:24:66.21:830,66,0	1/1:3,11:14:33.11:415,33,0	1/1:2,21:22:57.18:712,57,0	1/1:1,16:16:42.13:528,42,0	1/1:1,27:28:75.24:943,75,0	1/1:1,16:17:45.14:561,45,0	1/1:2,14:16:39.12:491,39,0	1/1:1,13:14:42.13:528,42,0	1/1:1,23:24:63.20:791,63,0	1/1:1,13:14:39.12:491,39,0	1/1:1,12:12:33.11:415,33,0	1/1:2,16:18:20.56:547,21,0	1/1:5,17:22:27.78:626,28,0	1/1:3,15:14:42.13:528,42,0	1/1:2,27:29:75.24:939,75,0	1/1:3,9:12:27.09:340,27,0	1/1:1,24:25:66.17:808,66,0	1/1:4,22:26:63.20:784,63,0	1/1:2,14:15:42.13:528,42,0	1/1:0,24:24:69.18:846,69,0	1/1:3,26:28:75.24:944,75,0	1/1:1,18:19:51.16:641,51,0	1/1:0,14:14:39.12:487,39,0
chr10	36229707	.	TTG	T	7939.87	PASS	AB=0.881;AC=37;AF=0.661;AN=56;BaseQRankSum=-4.196;DP=1253;FS=20.688;HRun=0;HaplotypeScore=380.5696;InbreedingCoeff=0.4355;MQ=37.42;MQ0=36;MQRankSum=5.908;QD=7.36;ReadPosRankSum=3.777;VQSLOD=3.5620;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:44,19:54:36.85:571,37,0	1/1:6,3:9:12.04:144,12,0	0/0:45,0:28:19.17:0,19,201	0/0:44,0:25:27.91:0,28,355	0/0:8,0:25:20.93:0,21,185	0/1:38,2:39:9.01:162,0,9	1/1:106,13:110:22.38:606,22,0	0/1:64,12:58:99:418,0,248	0/0:7,0:21:14.95:0,15,124	1/1:49,8:53:23.59:506,24,0	1/1:8,6:13:5.94:56,6,0	1/1:16,4:19:18.87:215,19,0	0/1:26,2:26:3.74:100,0,4	1/1:56,12:65:9.71:415,10,0	0/1:38,7:41:34.35:183,0,34	0/0:10,0:15:18.45:0,18,158	0/0:11,0:21:28.51:0,29,234	0/1:74,22:93:18.66:776,0,19	1/1:40,6:34:12.66:380,13,0	1/1:21,7:22:29.16:303,29,0	1/1:121,31:143:87.75:1059,88,0	1/1:18,9:24:26.87:262,27,0	1/1:17,6:20:14.92:132,15,0	1/1:21,10:32:35.01:332,35,0	1/1:10,6:16:20.98:221,21,0	0/1:51,14:61:31.81:583,0,32	0/1:28,3:30:13.13:179,0,13	1/1:12,7:18:29.83:337,30,0
chr10	36229725	.	GTA	G	9864.32	PASS	AB=1.000;AC=46;AF=0.821;AN=56;BaseQRankSum=-2.429;DP=1953;FS=10.551;HRun=0;HaplotypeScore=531.3225;InbreedingCoeff=0.4964;MQ=31.82;MQ0=61;MQRankSum=-0.059;QD=5.26;ReadPosRankSum=-4.699;VQSLOD=1.0261;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:87,1:64:37.83:195,38,0	1/1:35,0:28:46.80:288,47,0	0/1:32,0:10:12.38:12,0,78	0/0:41,0:16:15.53:0,16,308	0/0:17,0:16:20.98:0,21,216	1/1:71,0:63:20.31:126,20,0	1/1:202,0:174:99:585,106,0	0/1:124,0:92:99:626,0,132	0/0:18,0:16:15.02:0,15,149	1/1:109,1:97:99:1194,128,0	1/1:41,0:37:3.55:14,4,0	1/1:27,0:23:9.06:92,9,0	1/1:43,0:38:32.10:164,32,0	1/1:104,0:97:36.51:276,37,0	1/1:67,0:55:20.66:110,21,0	0/1:14,0:14:38.85:39,0,169	0/1:20,0:19:6.70:7,0,226	1/1:149,0:136:99:1781,245,0	1/1:62,0:45:49.69:518,50,0	1/1:62,0:49:82.31:576,82,0	1/1:243,1:212:99:550,107,0	1/1:51,0:45:23.87:113,24,0	1/1:23,0:19:9.36:45,9,0	1/1:45,1:41:21.30:109,21,0	1/1:51,0:47:23.84:134,24,0	1/1:119,0:106:99:1392,201,0	1/1:54,0:49:65.64:398,66,0	1/1:33,0:31:81.80:520,82,0
chr10	36229851	.	CTGTGTGTG	C	2176.15	PASS	AB=0.962;AC=16;AF=0.308;AN=52;BaseQRankSum=8.466;DP=2987;DS;FS=34.638;HRun=0;HaplotypeScore=495.6986;InbreedingCoeff=-0.3938;MQ=19.03;MQ0=1486;MQRankSum=-2.692;QD=0.95;ReadPosRankSum=-3.763;VQSLOD=-0.0887;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:125,0:44:5.12:0,5,300	0/0:61,0:17:5.93:0,6,40	./.	./.	0/0:20,0:14:4.92:0,5,114	0/1:115,0:52:99:135,0,123	0/1:213,3:120:99:506,0,269	0/1:218,0:52:76.68:77,0,903	0/0:14,0:8:11.97:0,12,297	0/1:191,1:33:99:157,0,448	0/1:86,0:30:17.50:18,0,330	0/0:35,0:21:3:0,3,65	0/1:84,0:25:19.90:20,0,398	0/1:113,2:37:99:370,0,205	0/1:104,0:54:99:131,0,456	0/0:13,0:10:2.86:0,3,28	0/0:17,0:11:21.07:0,21,591	0/1:107,1:59:76.30:76,0,1476	0/1:212,1:34:99:256,0,1064	0/0:85,0:29:5.54:0,6,25	1/1:165,64:131:0.60:111,1,0	0/1:110,0:45:8.87:9,0,341	0/0:49,0:24:11.82:0,12,416	0/0:71,0:43:17.60:0,18,827	0/1:108,0:31:5.12:5,0,241	0/1:213,2:47:99:378,0,1554	0/1:73,1:31:68.72:69,0,880	0/0:61,0:20:7.13:0,7,273
chr10	36229875	.	GTGTGTA	G	5275.93	PASS	AB=0.986;AC=18;AF=0.346;AN=52;BaseQRankSum=5.835;DP=3628;DS;FS=39.095;HRun=0;HaplotypeScore=635.1446;InbreedingCoeff=-0.3580;MQ=17.30;MQ0=1927;MQRankSum=-3.244;QD=1.74;ReadPosRankSum=-0.163;VQSLOD=-0.4773;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:192,5:58:99:119,0,109	0/1:88,0:15:0:0,0,0	./.	./.	0/0:23,0:13:5.96:0,6,108	0/1:173,2:73:39.94:313,0,40	1/1:211,17:79:74.95:1186,75,0	0/1:240,0:20:81.69:82,0,460	0/0:13,0:7:8.96:0,9,199	0/1:219,5:41:99:380,0,457	0/1:102,0:25:6.46:6,0,269	0/0:48,0:17:7.46:0,7,68	0/1:137,4:62:99:203,0,371	0/1:201,3:75:99:436,0,217	0/1:180,4:90:99:161,0,374	0/0:20,0:7:2.77:0,3,26	0/0:29,0:11:21.05:0,21,455	0/1:177,5:83:99:575,0,1117	0/1:234,4:59:99:492,0,792	0/0:95,0:17:5.54:0,6,26	0/1:247,3:121:88.17:200,0,88	0/1:151,0:44:33.61:34,0,303	0/0:50,0:20:12.94:0,13,339	0/0:84,0:36:22.13:0,22,686	0/0:128,0:16:6.56:0,7,204	0/1:227,4:54:99:610,0,1087	0/1:129,4:66:99:465,0,687	0/1:70,0:15:14.14:14,0,226
chr10	36229877	.	GTGTA	G	4794.65	PASS	AB=0.992;AC=19;AF=0.365;AN=52;BaseQRankSum=4.996;DP=3558;DS;FS=13.281;HRun=0;HaplotypeScore=619.2369;InbreedingCoeff=-0.3948;MQ=17.35;MQ0=1890;MQRankSum=-4.541;QD=1.54;ReadPosRankSum=1.190;VQSLOD=0.0085;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:190,2:56:79.23:284,0,79	0/1:86,0:13:0:0,0,0	./.	./.	0/0:21,0:12:6.02:0,6,93	0/1:168,4:72:9.32:316,0,9	1/1:219,9:79:62.05:978,62,0	0/1:239,1:16:94.28:94,0,328	0/0:13,0:7:8.96:0,9,149	0/1:224,0:42:99:290,0,354	0/1:102,0:26:27.37:27,0,204	0/0:47,0:15:8.14:0,8,45	0/1:136,1:62:99:163,0,274	0/1:199,3:77:99:291,0,154	0/1:173,4:88:99:131,0,263	0/0:20,0:7:1.35:0,1,4	0/0:28,0:10:18.03:0,18,296	0/1:178,3:82:99:559,0,828	0/1:226,4:54:99:546,0,547	0/0:96,0:16:5.34:0,5,25	0/1:248,1:120:63.44:128,0,63	0/1:147,0:44:23.97:24,0,236	0/0:46,0:19:10.72:0,11,225	0/0:75,5:34:22.46:0,22,514	0/1:120,0:15:18.16:18,0,149	0/1:219,1:56:99:466,0,757	0/1:131,1:66:99:367,0,525	0/1:68,0:13:99:111,0,134
chr10	36229881	.	ATG	A	416.60	PASS	AB=0.996;AC=15;AF=0.288;AN=52;BaseQRankSum=6.614;DP=3495;DS;FS=2.556;HRun=0;HaplotypeScore=616.9153;InbreedingCoeff=-0.2242;MQ=17.26;MQ0=1861;MQRankSum=-3.188;QD=0.20;ReadPosRankSum=2.104;VQSLOD=-0.4859;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:175,0:50:20.33:20,0,116	0/1:85,0:13:0:0,0,0	./.	./.	0/0:17,0:10:6.01:0,6,85	0/1:163,0:66:62.82:63,0,69	0/1:218,1:76:50.58:156,0,51	0/0:239,0:18:29.96:0,30,440	0/0:12,0:6:8.96:0,9,122	0/0:226,0:43:11.95:0,12,583	0/0:103,0:24:2.90:0,3,136	0/1:45,0:15:1.87:2,0,18	0/1:137,1:63:8.93:9,0,346	0/1:194,2:77:99:105,0,119	0/1:175,1:91:22.90:23,0,245	1/1:17,0:7:2.98:24,3,0	0/0:24,0:8:16.61:0,17,260	0/1:170,3:78:81.78:82,0,994	0/0:249,1:55:1.02:0,1,652	0/0:102,0:18:5.36:0,5,25	0/1:250,0:117:21.10:21,0,35	0/1:146,0:43:6.12:6,0,174	0/0:43,0:18:10.26:0,10,178	0/0:72,0:29:20.28:0,20,345	0/0:114,0:16:8.61:0,9,114	0/1:216,1:57:38.71:39,0,887	0/1:124,0:62:0.81:1,0,606	0/0:69,0:13:13.83:0,14,174
chr10	36229925	.	GTGTA	G	7870.49	PASS	AB=0.986;AC=24;AF=0.462;AN=52;BaseQRankSum=10.720;DP=3483;DS;FS=43.652;HRun=0;HaplotypeScore=662.2522;InbreedingCoeff=-0.6009;MQ=19.72;MQ0=1458;MQRankSum=-4.317;QD=2.42;ReadPosRankSum=4.427;VQSLOD=-0.3646;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:203,7:77:64.93:348,0,65	0/1:73,0:17:0.74:1,0,76	./.	./.	1/1:13,0:6:2.22:7,2,0	0/1:181,5:80:99:915,0,144	0/1:236,1:76:68.77:171,0,69	0/1:153,0:14:35.94:36,0,180	0/0:12,0:6:6.02:0,6,100	0/1:210,1:51:99:423,0,148	0/0:92,0:36:0.48:0,0,78	0/1:44,2:21:81.27:81,0,143	0/1:155,3:93:99:614,0,357	1/1:199,1:88:22.36:714,22,0	0/1:212,3:118:99:689,0,214	0/0:17,0:5:3.01:0,3,55	0/0:31,0:16:25.12:0,25,426	0/1:168,9:101:99:1404,0,597	0/1:190,4:54:99:694,0,256	0/1:105,0:37:32.73:33,0,169	0/1:244,5:103:99:244,0,129	0/1:171,5:76:79.90:205,0,80	0/1:28,0:14:31.75:32,0,34	0/1:78,1:32:6.83:7,0,40	0/1:162,0:57:99:106,0,228	0/1:197,0:57:99:448,0,326	0/1:129,0:66:99:686,0,365	0/1:50,0:12:12.11:12,0,26
chr10	36229993	.	CT	C	715.29	PASS	AB=0.828;AC=19;AF=0.352;AN=54;BaseQRankSum=10.243;DP=1912;DS;FS=57.739;HRun=2;HaplotypeScore=470.2617;InbreedingCoeff=-0.1205;MQ=29.52;MQ0=340;MQRankSum=-4.578;QD=0.74;ReadPosRankSum=2.460;VQSLOD=0.2370;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:137,14:117:87.61:0,88,1385	0/0:32,8:27:31.74:0,32,427	0/0:36,0:15:30.10:0,30,447	0/0:37,0:15:36.12:0,36,506	1/1:11,8:14:5.54:58,6,0	0/1:42,16:30:39.39:39,0,293	0/0:105,31:87:30.44:0,30,1396	0/0:115,1:75:99:0,204,2615	./.	0/1:96,15:65:1.45:1,0,1558	0/0:54,12:48:0.67:0,1,221	0/1:35,10:32:59.03:59,0,171	0/0:40,8:36:29.64:0,30,628	0/1:55,15:39:29.36:29,0,301	0/1:43,20:36:9.96:10,0,166	1/1:2,3:4:3.01:37,3,0	1/1:6,10:9:8.06:80,8,0	0/1:74,13:70:99:172,0,1074	0/0:100,2:71:99:0,137,2003	0/1:53,10:57:12.64:13,0,489	0/0:137,15:102:51.17:0,51,1149	0/1:89,17:80:9.45:9,0,597	0/1:34,3:30:65.56:66,0,258	0/1:29,30:43:67.73:126,0,68	0/1:63,20:60:81.35:81,0,402	0/1:94,10:66:46.65:47,0,1409	0/0:42,6:31:57.06:0,57,727	0/1:17,0:15:47.24:47,0,184
chr10	36229994	.	T	TG	1356.20	PASS	AB=0.941;AC=21;AF=0.389;AN=54;BaseQRankSum=7.220;DP=1801;DS;FS=39.766;HRun=0;HaplotypeScore=426.5104;InbreedingCoeff=-0.2679;MQ=29.88;MQ0=323;MQRankSum=-4.640;QD=1.17;ReadPosRankSum=1.896;VQSLOD=1.0509;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:146,4:117:99:0,129,1381	0/0:36,3:27:36.73:0,37,408	0/0:36,0:15:30.10:0,30,418	0/0:38,0:15:36.11:0,36,473	1/1:17,1:14:4.34:40,4,0	0/1:47,6:27:99:101,0,262	0/1:117,8:81:99:120,0,1241	0/0:111,1:76:99:0,204,2475	./.	0/1:104,1:64:91.19:91,0,1475	0/1:65,2:49:40.11:40,0,215	0/1:35,9:31:99:223,0,150	0/1:42,1:32:51.36:51,0,559	0/1:61,4:33:99:118,0,306	0/0:51,3:27:16.64:0,17,173	1/1:5,0:4:2.90:16,3,0	1/1:13,2:8:0.89:15,1,0	0/1:71,8:61:99:334,0,989	0/0:99,0:67:99:0,117,1869	0/0:68,2:56:17.10:0,17,492	0/1:127,9:93:5.73:6,0,1007	0/1:95,1:72:23.26:23,0,574	0/1:36,3:31:48.33:48,0,241	0/1:55,4:44:67.74:69,0,68	0/1:79,1:59:87.63:88,0,379	0/1:97,1:65:69.17:69,0,1396	0/0:38,1:25:64.70:0,65,716	0/1:17,0:14:63.49:63,0,210
chr10	36229996	.	C	CTG	891.68	PASS	AB=0.943;AC=35;AF=0.700;AN=50;BaseQRankSum=-2.711;DP=1853;DS;FS=4.001;HRun=0;HaplotypeScore=488.3958;InbreedingCoeff=-0.2525;MQ=29.77;MQ0=330;MQRankSum=0.334;QD=0.54;ReadPosRankSum=-0.113;VQSLOD=0.0558;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:143,0:119:24.31:24,0,28	1/1:33,0:27:4.53:15,5,0	./.	./.	1/1:20,1:17:7.85:65,8,0	1/1:55,0:29:8:57,8,0	0/1:120,1:82:27.94:125,0,28	0/0:96,0:75:8.87:0,9,64	./.	0/1:92,0:66:15.66:80,0,16	1/1:65,0:53:2.28:19,2,0	1/1:50,0:35:18.05:77,18,0	0/1:45,0:34:2.59:6,0,3	0/1:64,1:36:6.56:70,0,7	1/1:50,0:27:2.04:6,2,0	1/1:6,0:5:2.80:13,3,0	0/1:16,0:8:7.34:7,0,11	0/1:79,1:62:76.04:105,0,76	1/1:85,0:66:0.47:1,0,0	0/1:68,0:60:17.70:18,0,23	1/1:129,0:94:0.99:79,1,0	0/1:93,0:74:17.65:18,0,32	0/1:45,0:36:5.69:8,0,6	1/1:65,0:50:12.83:86,13,0	1/1:80,0:60:3.83:25,4,0	0/1:95,0:65:21.74:22,0,70	0/1:38,0:25:8.47:33,0,8	0/1:14,1:14:21.64:70,0,22
chr10	36230046	.	TTC	T	5224.68	PASS	AB=0.900;AC=40;AF=0.741;AN=54;BaseQRankSum=4.796;DP=2122;DS;FS=24.711;HRun=0;HaplotypeScore=317.3181;InbreedingCoeff=-0.2811;MQ=20.52;MQ0=812;MQRankSum=-1.817;QD=2.46;ReadPosRankSum=-1.177;VQSLOD=1.8820;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:102,9:72:99:192,0,130	1/1:75,13:30:26.08:335,26,0	0/1:38,0:3:10.29:10,0,41	0/1:37,0:6:2.22:2,0,14	0/1:9,0:8:14.96:15,0,37	0/1:42,5:14:10.02:79,0,10	1/1:99,22:59:63.11:586,63,0	0/1:129,24:51:16.38:585,0,16	./.	0/1:137,30:43:99:532,0,104	1/1:114,17:48:11.36:122,11,0	1/1:43,3:26:2.85:117,3,0	1/1:29,5:14:13:142,13,0	1/1:52,9:17:2.97:53,3,0	0/1:36,15:13:0.66:116,0,1	0/1:3,1:3:20.77:41,0,21	1/1:10,0:4:0.01:30,0,0	1/1:42,7:30:34.46:429,34,0	0/1:100,8:21:6.93:204,0,7	1/1:139,33:71:60.64:590,61,0	0/1:151,31:67:66.22:66,0,155	1/1:117,15:41:11.61:122,12,0	0/1:34,4:19:7.30:7,0,20	0/1:46,3:28:18.62:19,0,115	1/1:71,11:38:33.11:242,33,0	0/1:103,22:36:99:261,0,190	1/1:35,8:15:6.47:166,6,0	1/1:25,6:14:23.59:160,24,0
chr10	36230050	.	CTG	C	1922	PASS	AB=0.958;AC=26;AF=0.481;AN=54;BaseQRankSum=6.739;DP=2146;DS;FS=10.862;HRun=0;HaplotypeScore=340.3275;InbreedingCoeff=-0.5029;MQ=20.71;MQ0=741;MQRankSum=0.648;QD=0.93;ReadPosRankSum=1.990;VQSLOD=0.4067;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:114,1:73:57.29:57,0,160	1/1:86,0:32:30.21:187,30,0	0/1:31,2:4:14.36:29,0,14	0/0:34,1:7:0:0,0,0	0/0:8,0:7:6.02:0,6,94	0/1:41,3:16:9.80:69,0,10	1/1:115,2:60:26.27:239,26,0	0/1:161,1:55:99:126,0,337	./.	0/1:165,5:48:99:308,0,314	0/1:125,5:47:28.05:52,0,28	0/1:39,7:25:18.12:145,0,18	0/1:35,0:16:3.72:69,0,4	0/1:59,1:17:16.72:17,0,20	0/1:52,1:12:6.02:65,0,6	0/1:4,0:3:8.10:8,0,41	0/0:10,0:4:3:0,3,26	0/1:48,1:32:99:119,0,102	0/1:98,2:23:94.25:94,0,101	0/1:176,0:75:38.65:163,0,39	0/1:174,7:71:51.64:52,0,177	0/1:129,2:38:19.50:29,0,19	0/0:32,1:19:1.70:0,2,21	0/1:42,5:27:16.06:16,0,119	0/1:83,2:39:24.86:48,0,25	0/1:129,1:40:86.35:86,0,358	0/1:44,2:16:2.70:53,0,3	1/1:30,0:15:8.18:36,8,0
chr10	36230068	.	GTGTGTGTA	G	3705.50	PASS	AB=0.995;AC=23;AF=0.426;AN=54;BaseQRankSum=8.778;DP=1850;FS=23.648;HRun=0;HaplotypeScore=309.6140;InbreedingCoeff=-0.6206;MQ=19.82;MQ0=685;MQRankSum=-1.856;QD=2.20;ReadPosRankSum=-0.033;VQSLOD=1.1121;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:95,0:56:22.63:23,0,811	0/1:61,0:27:99:319,0,141	0/0:28,0:3:6.02:0,6,115	0/0:27,0:5:14.91:0,15,221	0/0:6,0:6:6.02:0,6,268	0/1:43,0:15:99:130,0,289	0/1:106,0:52:99:683,0,481	0/1:149,0:39:99:149,0,2255	./.	0/1:148,2:43:99:383,0,1919	0/0:93,1:36:15.28:0,15,199	0/1:35,0:20:60.18:60,0,405	0/1:36,0:16:99:161,0,145	0/1:49,0:13:15.74:16,0,155	0/1:49,0:15:58.08:58,0,99	0/1:3,0:2:74.97:75,0,127	0/0:7,0:4:6.02:0,6,108	0/1:47,0:30:99:256,0,672	0/1:126,0:22:50.78:51,0,574	0/1:150,3:64:99:440,0,375	0/1:166,0:61:39.87:40,0,1320	0/1:101,1:29:99:122,0,142	0/1:24,0:11:3.67:4,0,150	0/1:40,0:22:28.59:29,0,460	0/1:73,1:33:99:167,0,340	0/1:113,1:37:99:143,0,1904	0/1:40,2:16:99:262,0,121	1/1:21,1:8:8.67:136,9,0
chr10	36230070	.	GTGTGTA	G	3762.32	PASS	AB=0.964;AC=23;AF=0.426;AN=54;BaseQRankSum=9.717;DP=1761;FS=28.747;HRun=0;HaplotypeScore=285.7397;InbreedingCoeff=-0.6437;MQ=19.93;MQ0=652;MQRankSum=-0.143;QD=2.33;ReadPosRankSum=-1.055;VQSLOD=1.0885;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:91,1:53:42.57:43,0,594	0/1:53,3:25:31.77:367,0,32	0/0:23,0:3:6:0,6,67	0/0:25,0:5:8.94:0,9,113	0/0:5,0:5:6.02:0,6,216	0/1:40,1:15:99:105,0,198	0/1:91,7:49:99:765,0,401	0/1:141,1:37:94.23:94,0,1628	./.	0/1:144,3:42:99:376,0,1243	0/0:86,1:33:4.79:0,5,114	0/1:35,0:19:39.70:40,0,254	0/1:32,4:16:93.28:143,0,93	0/1:43,2:12:15.32:15,0,107	0/1:48,0:15:20.62:87,0,21	0/1:2,1:2:61.18:61,0,101	0/0:6,0:4:3.01:0,3,82	0/1:43,2:29:99:181,0,412	0/1:120,0:21:59.49:59,0,368	0/1:139,2:59:99:485,0,209	0/1:157,2:60:66.72:67,0,973	0/1:96,1:29:99:144,0,102	0/1:22,0:11:3.68:4,0,107	0/1:40,0:22:13.02:13,0,355	0/1:70,2:32:99:184,0,254	0/1:108,3:36:99:191,0,1449	0/1:39,2:15:75.48:252,0,75	1/1:20,1:8:8.37:87,8,0
chr10	36230072	.	GTGTA	G	3608.59	PASS	AB=0.976;AC=23;AF=0.426;AN=54;BaseQRankSum=9.366;DP=1686;FS=25.740;HRun=0;HaplotypeScore=263.2688;InbreedingCoeff=-0.6191;MQ=19.94;MQ0=616;MQRankSum=-0.742;QD=2.30;ReadPosRankSum=0.155;VQSLOD=1.1173;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:91,1:53:99:139,0,395	1/1:53,1:25:1.56:462,2,0	0/0:23,0:3:2.99:0,3,23	0/0:23,0:4:3.01:0,3,43	0/0:3,0:3:6.02:0,6,163	0/1:40,1:15:99:116,0,109	0/1:89,6:48:99:495,0,234	0/1:132,2:36:81.01:81,0,1048	./.	0/1:133,7:38:99:317,0,806	0/1:80,1:32:48.33:88,0,48	0/1:33,0:19:23.40:23,0,104	0/1:33,1:16:53.91:185,0,54	0/1:42,2:12:17.05:17,0,53	0/1:45,1:13:16.14:102,0,16	0/1:3,0:2:34.97:35,0,75	0/0:6,0:3:3.01:0,3,61	0/1:41,1:28:98.44:98,0,187	0/1:115,0:19:99:103,0,218	0/1:126,7:54:99:573,0,118	0/1:154,3:59:41.89:42,0,569	0/1:91,2:27:75.04:133,0,75	0/0:21,0:11:0.13:0,0,77	0/0:39,0:22:0.63:0,1,251	0/1:66,2:31:99:200,0,177	0/1:101,4:36:99:181,0,937	0/1:40,1:15:29.20:163,0,29	1/1:18,1:8:7.06:54,7,0
chr10	36230074	.	GTA	G	2539.28	PASS	AB=0.956;AC=26;AF=0.481;AN=54;BaseQRankSum=5.747;DP=1580;FS=12.512;HRun=0;HaplotypeScore=238.2020;InbreedingCoeff=-0.5459;MQ=19.93;MQ0=587;MQRankSum=0.587;QD=1.67;ReadPosRankSum=-2.468;VQSLOD=0.8811;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:82,6:49:99:105,0,223	1/1:43,5:24:5.74:290,6,0	1/1:21,0:3:4.04:16,4,0	0/0:17,0:3:2.99:0,3,24	0/0:3,0:3:6.02:0,6,115	0/1:38,2:15:58.52:85,0,59	0/1:86,6:47:33.78:287,0,34	0/1:126,2:34:81.06:81,0,571	./.	0/1:125,4:37:99:307,0,445	0/1:64,8:26:9.03:66,0,9	0/1:31,0:18:10.51:65,0,11	0/1:32,2:16:14.79:121,0,15	1/1:39,2:11:0.49:25,0,0	0/1:39,5:12:7.82:65,0,8	0/1:3,0:2:19.85:20,0,51	0/0:6,0:3:3.01:0,3,35	0/1:42,0:28:78.17:189,0,78	0/1:110,2:18:99:145,0,127	0/1:110,11:48:56.65:387,0,57	0/1:150,4:59:50.92:51,0,320	0/1:79,7:24:48.79:65,0,49	0/1:15,1:8:2.71:3,0,32	0/0:33,1:18:8.58:0,9,171	0/1:51,6:24:71.47:111,0,71	0/1:99,3:36:82.11:82,0,557	0/1:37,1:15:13.83:95,0,14	0/1:19,0:8:3.22:24,0,3
chr10	36232074	.	G	GT	26999.60	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-9.371;DP=740;FS=8.075;HRun=2;HaplotypeScore=66.3365;InbreedingCoeff=0.9939;MQ=82.86;MQ0=0;MQRankSum=-10.980;QD=38.96;ReadPosRankSum=5.689;VQSLOD=4.8234;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,45:46:99:1901,132,0	1/1:0,8:8:24.08:346,24,0	0/0:20,0:20:57.15:0,57,682	0/0:27,0:27:72.22:0,72,882	1/1:1,20:21:60.20:864,60,0	1/1:1,22:22:60.20:864,60,0	1/1:1,40:41:99:1556,108,0	1/1:2,24:26:72.23:1017,72,0	1/1:1,36:37:96.32:1382,96,0	1/1:2,16:18:48.13:655,48,0	1/1:0,9:9:27.05:365,27,0	1/1:0,37:37:99:1469,102,0	1/1:2,21:23:60.20:853,60,0	1/1:1,30:31:84.28:1209,84,0	1/1:0,19:19:57.19:821,57,0	1/1:0,24:24:66.22:951,66,0	1/1:2,42:44:99:1599,111,0	1/1:0,37:37:99:1469,102,0	1/1:0,24:24:69.23:994,69,0	1/1:1,11:13:30.10:432,30,0	1/1:0,48:48:99:1944,135,0	1/1:2,27:29:75.25:1078,75,0	1/1:1,13:14:32.93:458,33,0	1/1:3,33:36:96.32:1382,96,0	1/1:0,25:25:72.24:1036,72,0	1/1:1,32:33:96.31:1364,96,0	1/1:4,16:19:51.17:733,51,0	1/1:0,7:7:18.06:259,18,0
chr10	36237208	.	C	CCT	9198.14	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-18.524;DP=756;FS=3.212;HRun=0;HaplotypeScore=118.2671;InbreedingCoeff=0.9999;MQ=86.11;MQ0=3;MQRankSum=-5.280;QD=36.94;ReadPosRankSum=3.917;VQSLOD=6.5409;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,40:44:96.33:1631,96,0	0/0:18,0:18:51.16:0,51,650	0/0:33,0:33:75.22:0,75,946	0/0:27,0:27:68.98:0,69,831	1/1:2,19:21:42.08:681,42,0	0/0:23,0:23:57.17:0,57,727	0/0:43,0:43:99:0,105,1336	0/0:28,0:28:72.20:0,72,887	1/1:6,33:39:78.27:1326,78,0	0/0:31,0:31:75.23:0,75,952	0/0:18,0:18:51.15:0,51,646	1/1:3,24:27:63.22:1059,63,0	0/0:25,0:25:60.19:0,60,766	0/0:28,0:28:72.19:0,72,892	0/0:26,0:26:72.21:0,72,899	1/1:4,28:32:81.28:1377,81,0	1/1:5,23:28:57.20:969,57,0	0/0:19,0:19:48.16:0,48,624	0/0:19,0:19:36.09:0,36,452	0/0:24,0:24:60.19:0,60,780	0/0:48,0:48:99:0,117,1447	0/0:18,0:18:45.11:0,45,553	1/1:0,15:15:39.13:663,39,0	1/1:5,38:40:90.14:1493,90,0	0/0:18,0:18:48.15:0,48,611	0/0:21,0:21:53.90:0,54,663	0/0:29,0:29:75.22:0,75,957	0/0:11,0:11:30.10:0,30,389
chr10	36239014	.	ACC	A	4773.59	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=9.128;DP=585;FS=2.174;HRun=7;HaplotypeScore=75.7327;InbreedingCoeff=0.9986;MQ=82.47;MQ0=1;MQRankSum=-4.052;QD=33.15;ReadPosRankSum=6.375;VQSLOD=4.6999;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:3,0:34:78.37:0,78,333	0/0:9,0:9:21.07:0,21,367	0/0:15,0:16:43.70:0,44,686	0/0:20,0:20:42.50:0,43,713	1/1:3,6:9:27.09:340,27,0	0/0:17,0:17:48.14:0,48,776	0/0:31,0:31:87.28:0,87,1487	0/0:26,0:26:66.22:0,66,1122	1/1:0,20:20:54.17:688,54,0	0/0:16,0:16:48.14:0,48,757	0/0:10,0:10:30.08:0,30,470	1/1:0,22:22:63.20:803,63,0	0/0:25,0:25:75.25:0,75,1284	0/0:18,0:18:51.17:0,51,884	0/0:27,0:27:78.27:0,78,1363	1/1:0,17:17:45.14:573,45,0	1/1:1,36:37:87.28:1108,87,0	0/0:28,0:28:75.24:0,75,1281	0/0:19,0:19:36.11:0,36,604	0/0:12,0:12:33.11:0,33,566	0/0:46,0:44:99:0,126,2146	0/0:9,0:9:27.09:0,27,471	1/1:0,11:11:30.07:382,30,0	1/1:3,25:27:69.22:879,69,0	0/0:15,0:15:45.15:0,45,779	0/0:19,0:19:54.18:0,54,916	0/0:22,0:22:63.17:0,63,1058	0/0:22,0:22:63.20:0,63,1059
chr10	36240003	.	C	CACAG	10018.46	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-7.045;DP=647;FS=0.754;HRun=0;HaplotypeScore=135.7181;InbreedingCoeff=0.9990;MQ=90.69;MQ0=0;MQRankSum=-4.992;QD=61.84;ReadPosRankSum=5.343;VQSLOD=6.7589;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,129,2236	0/0:17,0:17:48.16:0,48,861	0/0:32,0:32:81.24:0,81,1405	0/0:34,0:33:86.50:0,87,1528	1/1:0,16:16:29.61:791,30,0	0/0:16,0:16:48.16:0,48,874	0/0:25,0:25:69.22:0,69,1224	0/0:25,0:25:69.23:0,69,1218	1/1:1,28:29:78.27:2057,78,0	0/0:20,0:20:57.20:0,57,1047	0/0:14,0:14:33.08:0,33,607	1/1:3,21:26:66.23:1730,66,0	0/0:21,0:21:60.16:0,60,1025	0/0:26,0:26:75.26:0,75,1370	0/0:21,0:21:60.21:0,60,1103	1/1:3,14:17:42.14:1108,42,0	1/1:3,30:34:78.27:2037,78,0	0/0:28,0:28:78.27:0,78,1425	0/0:21,0:21:51.17:0,51,922	0/0:17,0:17:45.14:0,45,779	0/0:43,0:43:99:0,117,2120	0/0:21,0:21:63.16:0,63,1095	1/1:2,14:17:29.75:791,30,0	1/1:1,21:23:57.01:1505,57,0	0/0:14,0:14:36.12:0,36,662	0/0:18,0:18:54.19:0,54,994	0/0:15,0:15:45.15:0,45,828	0/0:8,0:8:21.06:0,21,345
chr10	36242328	.	G	GAA	9651.43	PASS	AB=0.548;AC=48;AF=0.857;AN=56;BaseQRankSum=7.264;DP=571;FS=14.194;HRun=0;HaplotypeScore=139.9807;InbreedingCoeff=0.6604;MQ=76.33;MQ0=2;MQRankSum=-5.355;QD=20.15;ReadPosRankSum=6.376;VQSLOD=4.3303;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,111,1268	1/1:1,7:8:8.74:299,9,0	0/0:25,0:22:58.74:0,59,850	0/0:22,0:20:29.11:0,29,485	1/1:5,0:20:22.74:151,23,0	1/1:2,10:14:34.36:447,34,0	1/1:4,11:19:2.14:424,2,0	1/1:11,12:28:46.64:649,47,0	1/1:3,0:13:22.17:145,22,0	1/1:5,16:23:35.03:570,35,0	1/1:4,14:17:7.74:423,8,0	1/1:2,0:22:35.50:206,35,0	0/1:1,8:11:5.95:261,0,6	1/1:2,16:20:45:611,45,0	1/1:8,16:26:59.96:807,60,0	1/1:1,0:23:53.06:292,53,0	0/1:6,0:24:5.95:194,0,6	1/1:2,12:14:24.99:325,25,0	1/1:3,10:13:21.54:418,22,0	1/1:26,0:29:47.59:590,48,0	1/1:3,6:10:13.12:257,13,0	1/1:10,11:22:27.15:514,27,0	1/1:8,0:19:14.27:79,14,0	1/1:2,0:23:21.45:182,21,0	1/1:7,13:22:15.81:293,16,0	1/1:7,17:27:51.96:683,52,0	1/1:3,14:18:12.54:466,13,0	1/1:0,10:13:26.96:367,27,0
chr10	36242329	.	G	GA	8193.74	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-0.733;DP=593;FS=5.733;HRun=9;HaplotypeScore=152.0122;InbreedingCoeff=0.9691;MQ=74.86;MQ0=2;MQRankSum=-6.266;QD=15.01;ReadPosRankSum=2.746;VQSLOD=3.6188;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,38:45:96.21:1045,96,0	1/1:10,0:10:25.84:139,26,0	0/0:22,2:22:17.44:0,17,306	0/0:22,0:20:32.57:0,33,256	1/1:21,0:21:38.93:377,39,0	1/1:17,0:17:40.40:238,40,0	1/1:19,0:19:35.86:247,36,0	1/1:33,0:33:63.99:399,64,0	1/1:13,0:13:27.07:298,27,0	1/1:24,0:24:43.38:273,43,0	1/1:16,0:16:27.46:157,27,0	1/1:21,0:21:42.11:457,42,0	1/1:13,0:13:11.35:120,11,0	1/1:21,0:21:48.82:277,49,0	1/1:26,0:26:57.67:341,58,0	1/1:23,0:23:63.06:654,63,0	1/1:26,0:26:36.39:544,36,0	1/1:14,0:14:22.95:123,23,0	1/1:15,0:15:35.07:180,35,0	1/1:11,0:32:58.51:368,59,0	1/1:10,0:10:20.07:111,20,0	1/1:22,0:22:43.16:244,43,0	1/1:20,0:20:23.98:238,24,0	1/1:24,0:24:45.11:490,45,0	1/1:20,0:20:25.95:146,26,0	1/1:27,0:27:57.76:351,58,0	1/1:19,0:19:37.26:210,37,0	1/1:14,0:14:28.70:167,29,0
chr10	36245865	.	AC	A	5786.98	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-9.293;DP=342;FS=2.372;HRun=7;HaplotypeScore=53.9407;InbreedingCoeff=0.9485;MQ=62.49;MQ0=0;MQRankSum=-4.104;QD=24.11;ReadPosRankSum=0.576;VQSLOD=5.1416;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,31:32:81.18:826,81,0	1/1:2,2:4:2.98:31,3,0	0/0:11,0:11:18.05:0,18,215	0/0:9,0:8:12.08:0,12,181	0/0:12,0:12:33.11:0,33,415	1/1:1,10:11:18.04:184,18,0	1/1:1,13:14:36.08:367,36,0	1/1:6,12:18:36.05:357,36,0	0/0:10,0:10:24.04:0,24,283	1/1:2,10:12:30.05:295,30,0	1/1:1,6:7:12.03:122,12,0	0/0:12,0:12:27.09:0,27,339	1/1:1,7:8:18.04:183,18,0	1/1:0,8:8:15.03:153,15,0	1/1:0,18:18:42.09:428,42,0	0/0:12,0:12:32.94:0,33,344	0/0:21,0:21:51.11:0,51,608	1/1:1,6:7:12.02:122,12,0	1/1:0,11:11:33.07:335,33,0	1/1:1,10:11:30.07:305,30,0	1/1:0,19:19:48.11:490,48,0	1/1:0,13:13:36.08:367,36,0	0/0:6,0:6:15.05:0,15,188	0/0:9,0:9:27.08:0,27,328	1/1:1,9:10:24.05:244,24,0	1/1:3,10:13:30.07:305,30,0	1/1:0,13:13:36.08:367,36,0	1/1:1,10:11:30.06:306,30,0
chr10	36251474	.	G	GTTCA	3486.98	PASS	AB=0.625;AC=7;AF=0.125;AN=56;BaseQRankSum=-3.460;DP=659;FS=1.752;HRun=0;HaplotypeScore=110.7607;InbreedingCoeff=0.8405;MQ=71.93;MQ0=0;MQRankSum=-2.269;QD=32.59;ReadPosRankSum=-0.909;VQSLOD=3.1749;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:40:57.14:853,57,0	0/0:13,0:13:26.37:0,26,434	0/0:19,0:18:12.04:0,12,187	0/0:18,0:17:9.03:0,9,144	0/0:28,0:28:57.19:0,57,918	0/0:22,0:22:42.14:0,42,676	0/0:26,0:26:51.17:0,51,819	0/0:30,0:30:48.15:0,48,751	0/0:24,0:26:45.15:0,45,702	0/0:25,0:25:30.09:0,30,461	0/0:11,0:11:18.06:0,18,290	1/1:10,15:25:42.14:1013,42,0	0/0:26,0:26:48.16:0,48,765	0/0:24,0:25:51.17:0,51,801	0/0:28,0:27:60.20:0,60,963	0/0:28,0:28:60.20:0,60,966	0/0:23,0:22:57.18:0,57,893	0/0:18,0:18:42.14:0,42,676	0/0:15,0:15:15.05:0,15,236	0/0:24,0:24:43.70:0,44,675	0/0:29,0:29:63.21:0,63,1012	0/0:24,0:24:60.18:0,60,935	1/1:7,10:17:30.10:723,30,0	0/1:10,14:25:6.16:898,0,6	0/0:21,0:21:45.11:0,45,675	0/0:29,0:29:33.19:0,33,822	0/0:29,0:29:66.20:0,66,1034	0/0:15,0:15:33.11:0,33,531
chr10	36251977	.	GGAGAGAGAGAGAGAGAGAGAGAGAGA	G	2001.12	PASS	AC=4;AF=0.074;AN=54;BaseQRankSum=4.705;DP=511;FS=9.931;HRun=0;HaplotypeScore=285.0498;InbreedingCoeff=0.6123;MQ=53.36;MQ0=14;MQRankSum=-5.139;QD=45.48;ReadPosRankSum=0.809;VQSLOD=1.1605;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:34:41.66:0,42,3295	0/0:10,0:10:15.05:0,15,1175	0/0:27,0:15:6.02:0,6,164	0/0:37,0:18:3.01:0,3,49	0/0:10,0:10:9.03:0,9,578	0/0:15,0:15:18.52:0,19,1446	0/0:18,0:17:21.96:0,22,1115	0/0:18,0:17:20.56:0,21,1168	0/0:12,0:11:16.61:0,17,910	0/0:24,0:22:42.27:0,42,2707	0/0:10,0:10:12.04:0,12,911	1/1:14,11:28:30.57:1959,31,0	0/0:10,0:10:12.04:0,12,1063	0/0:11,0:11:9.03:0,9,738	0/0:20,0:20:18.01:0,18,796	0/0:21,0:19:31.89:0,32,2156	0/0:22,0:22:42.14:0,42,3677	0/0:14,0:14:27.04:0,27,1337	0/0:18,0:22:30.09:0,30,2155	0/0:19,0:18:15.03:0,15,1608	0/0:22,0:22:27.08:0,27,2702	0/0:14,0:14:20.47:0,20,698	./.	1/1:15,1:16:3.01:149,3,0	0/0:12,0:11:3.01:0,3,273	0/0:26,0:26:24.08:0,24,1942	0/0:8,0:7:9.03:0,9,780	0/0:16,0:13:24.08:0,24,1680
chr10	36252273	.	G	GGTGT	3179.12	PASS	AB=0.858;AC=39;AF=0.750;AN=52;BaseQRankSum=-2.317;DP=653;FS=2.348;HRun=0;HaplotypeScore=147.9564;InbreedingCoeff=-0.2102;MQ=64.88;MQ0=14;MQRankSum=-1.343;QD=5.57;ReadPosRankSum=1.131;VQSLOD=2.7482;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:3.58:0,4,13	1/1:3,5:9:6.36:139,6,0	./.	./.	1/1:17,0:16:2.90:69,3,0	0/1:20,0:29:11.14:131,0,11	1/1:26,1:26:8.77:126,9,0	1/1:21,0:20:5.93:54,6,0	0/1:13,0:17:21.83:46,0,22	1/1:16,0:18:13.57:158,14,0	1/1:10,1:13:5.56:82,6,0	1/1:21,0:20:15.02:219,15,0	1/1:21,4:26:3.01:70,3,0	0/1:18,4:26:60.68:61,0,61	1/1:23,3:24:4.77:157,5,0	1/1:14,5:23:17.80:350,18,0	0/1:24,0:36:59.18:327,0,59	1/1:15,5:24:14.79:260,15,0	0/1:11,0:13:13:38,0,13	1/1:13,0:13:2.13:53,2,0	0/1:60,9:79:42.31:67,0,42	0/1:16,0:16:16.79:93,0,17	0/1:6,0:6:0:0,0,0	1/1:27,0:27:17.85:269,18,0	0/1:14,3:18:23.49:115,0,23	0/1:25,0:26:24.77:246,0,25	1/1:9,2:13:5.98:110,6,0	0/1:17,0:14:34.26:80,0,34
chr10	36254791	.	CTGTGTGTGTG	C	4722	PASS	AB=0.822;AC=40;AF=0.909;AN=44;BaseQRankSum=2.301;DP=624;FS=7.539;HRun=0;HaplotypeScore=187.1707;InbreedingCoeff=-0.0058;MQ=57.70;MQ0=19;MQRankSum=-2.263;QD=9.72;ReadPosRankSum=-0.692;VQSLOD=2.5560;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:37,0:41:3.01:70,3,0	1/1:12,0:13:6.02:118,6,0	./.	./.	./.	1/1:14,5:18:6.02:176,6,0	./.	0/0:16,0:15:0:0,0,0	1/1:18,0:26:24.08:558,24,0	1/1:10,6:17:11.76:270,12,0	1/1:9,6:15:6.02:176,6,0	1/1:20,0:35:33.11:766,33,0	1/1:27,2:30:5.95:157,6,0	1/1:16,9:27:8.82:225,9,0	1/1:16,9:27:18.06:511,18,0	1/1:15,0:24:14.93:349,15,0	0/1:24,0:31:9.99:10,0,30	0/1:22,5:25:30:72,0,30	./.	1/1:12,4:15:9.03:265,9,0	./.	1/1:12,1:13:3.01:88,3,0	1/1:15,0:18:6.02:140,6,0	1/1:15,0:24:2.99:27,3,0	1/1:13,6:19:6.02:176,6,0	1/1:26,2:26:5.79:176,6,0	1/1:12,4:17:12.04:302,12,0	1/1:8,4:11:3.01:88,3,0
chr10	36255412	.	GAAGT	G	24296.56	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=6.817;DP=633;FS=0.000;HRun=0;HaplotypeScore=124.1980;InbreedingCoeff=0.9969;MQ=88.09;MQ0=2;MQRankSum=-9.538;QD=45.08;ReadPosRankSum=5.469;VQSLOD=5.1882;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,123,3280	1/1:0,9:9:27.09:500,27,0	0/0:22,0:22:66.23:0,66,1706	0/0:30,0:30:74.47:0,74,2034	1/1:2,19:20:26.88:499,27,0	1/1:2,25:27:66.23:1227,66,0	1/1:1,23:24:66.23:1231,66,0	1/1:4,19:23:57.10:926,57,0	1/1:1,19:20:54.19:1007,54,0	1/1:1,16:17:48.15:855,48,0	1/1:1,8:9:24.08:427,24,0	1/1:1,19:20:57.15:1023,57,0	1/1:2,19:21:54.19:1004,54,0	1/1:4,24:28:72.25:1343,72,0	1/1:1,43:43:99:2106,114,0	1/1:1,24:25:69.24:1287,69,0	1/1:2,28:30:60.16:1084,60,0	1/1:2,19:21:48.16:896,48,0	1/1:1,18:19:51.12:873,51,0	1/1:1,20:21:45.15:822,45,0	1/1:3,22:25:48.11:871,48,0	1/1:0,10:10:24.08:448,24,0	1/1:2,9:11:24.08:447,24,0	1/1:0,36:36:84.23:1562,84,0	1/1:2,21:23:60.21:1119,60,0	1/1:3,20:23:57.20:1063,57,0	1/1:1,20:21:60.21:1119,60,0	1/1:0,11:11:30.10:556,30,0
chr10	36255653	.	TA	T	16927.10	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=9.524;DP=726;FS=4.510;HRun=1;HaplotypeScore=88.2417;InbreedingCoeff=1.0000;MQ=90.68;MQ0=0;MQRankSum=-5.081;QD=39.09;ReadPosRankSum=1.136;VQSLOD=5.3906;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,154,2440	1/1:0,15:15:45.15:629,45,0	0/0:32,0:32:95.97:0,96,1384	0/0:29,0:29:38.20:0,38,1106	0/0:13,0:13:39.13:0,39,623	1/1:0,24:24:66.22:922,66,0	1/1:0,19:19:51.17:713,51,0	1/1:0,26:26:78.26:1091,78,0	0/0:29,0:29:87.30:0,87,1388	1/1:0,32:32:96.29:1305,96,0	1/1:0,28:28:78.22:1068,78,0	0/0:20,0:20:57.19:0,57,911	1/1:0,30:30:72.23:1007,72,0	1/1:0,19:19:54.18:755,54,0	1/1:0,29:29:81.27:1133,81,0	0/0:36,0:36:99:0,105,1677	0/0:23,0:23:69.24:0,69,1100	1/1:0,21:21:57.19:797,57,0	1/1:1,22:23:69.20:924,69,0	1/1:0,20:20:57.19:797,57,0	1/1:0,33:33:90.30:1255,90,0	1/1:0,18:18:51.17:713,51,0	0/0:22,0:22:66.21:0,66,1031	0/0:38,0:38:99:0,108,1702	1/1:0,29:29:75.25:1049,75,0	1/1:0,22:22:66.22:923,66,0	1/1:0,29:29:84.28:1174,84,0	1/1:0,16:16:48.16:671,48,0
chr10	36256269	.	TTCCATCCATCCA	T	669.11	PASS	AB=0.636;AC=1;AF=0.018;AN=56;BaseQRankSum=2.306;DP=1005;FS=9.493;HRun=0;HaplotypeScore=517.3416;InbreedingCoeff=0.0636;MQ=48.28;MQ0=22;MQRankSum=-2.202;QD=9.56;ReadPosRankSum=-0.857;VQSLOD=-0.0002;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:30,40:68:33.87:743,0,34	0/0:22,0:22:32.43:0,32,666	0/0:42,0:22:5.98:0,6,65	0/0:46,0:29:5.75:0,6,32	0/0:28,0:28:2.51:0,3,153	0/0:36,0:36:62.34:0,62,1104	0/0:34,0:33:25.16:0,25,278	0/0:47,0:47:51.27:0,51,410	0/0:46,0:47:66.25:0,66,1138	0/0:33,0:33:33.60:0,34,506	0/0:22,0:22:12.02:0,12,188	0/0:50,0:50:67.82:0,68,1372	0/0:40,0:39:47.71:0,48,1034	0/0:50,0:50:34.75:0,35,935	0/0:47,0:47:46.60:0,47,1003	0/0:58,0:59:78.87:0,79,1306	0/0:21,0:21:17.34:0,17,238	0/0:21,0:21:27.94:0,28,228	0/0:16,0:15:15.42:0,15,391	0/0:21,0:21:20.10:0,20,602	0/0:36,0:32:8.72:0,9,257	0/0:47,0:46:37.92:0,38,753	0/0:17,0:17:17.88:0,18,192	0/0:31,0:30:19.69:0,20,285	0/0:35,0:35:11.56:0,12,503	0/0:41,0:39:34.34:0,34,530	0/0:35,0:35:52.43:0,52,1031	0/0:11,0:11:2.01:0,2,5
chr10	36256272	.	C	CATCT	11662.49	PASS	AB=1.000;AC=42;AF=0.750;AN=56;BaseQRankSum=5.074;DP=1017;FS=1.205;HRun=0;HaplotypeScore=374.2034;InbreedingCoeff=0.2632;MQ=46.68;MQ0=23;MQRankSum=-5.157;QD=13.48;ReadPosRankSum=8.951;VQSLOD=2.6690;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:68,0:66:67.11:0,67,506	0/1:22,0:22:5.93:148,0,6	0/0:41,0:21:47.17:0,47,508	0/0:43,0:26:62.53:0,63,625	1/1:29,0:29:7.86:333,8,0	1/1:36,0:36:67.19:592,67,0	1/1:35,0:34:41.19:368,41,0	0/1:52,0:52:5.57:512,0,6	0/1:47,0:47:99:585,0,116	1/1:7,21:31:77.61:772,78,0	1/1:20,0:21:53.32:376,53,0	1/1:49,0:51:99:1032,102,0	1/1:40,0:39:41.65:415,42,0	1/1:51,0:51:79.92:737,80,0	1/1:49,0:51:89.67:930,90,0	0/1:59,0:59:23.71:865,0,24	0/1:20,0:20:2.42:167,0,2	0/1:21,0:21:21.44:248,0,21	1/1:19,0:18:1.71:182,2,0	1/1:24,0:24:24.32:289,24,0	0/1:39,0:34:6.76:90,0,7	0/1:47,0:46:25.77:364,0,26	1/1:18,0:18:38.19:282,38,0	1/1:30,0:29:42.27:406,42,0	1/1:37,0:37:25.82:469,26,0	1/1:39,0:37:63.46:698,63,0	1/1:36,0:36:52.18:581,52,0	1/1:10,0:10:26.77:222,27,0
chr10	36256334	.	TTCACCTAC	T	5241.19	PASS	AB=0.904;AC=20;AF=0.357;AN=56;BaseQRankSum=18.622;DP=1109;FS=16.758;HRun=0;HaplotypeScore=409.9773;InbreedingCoeff=-0.5990;MQ=43.60;MQ0=56;MQRankSum=-14.603;QD=6.68;ReadPosRankSum=-3.126;VQSLOD=1.4597;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:50,0:47:75.49:75,0,1205	0/1:15,2:17:99:140,0,905	0/0:48,0:3:9.02:0,9,153	0/0:53,0:8:23.75:0,24,493	0/1:27,0:27:28.04:28,0,425	0/0:33,0:33:22.71:0,23,2392	0/0:38,0:35:33.49:0,33,2256	0/0:49,0:43:99:0,114,3458	0/1:41,1:42:99:352,0,1008	0/1:36,2:36:99:155,0,2965	0/0:16,1:17:1.16:0,1,1048	0/1:50,2:52:99:165,0,2753	0/1:35,16:48:99:404,0,2777	0/1:46,20:65:99:626,0,3407	0/1:56,4:60:99:246,0,4421	0/1:50,1:48:99:643,0,982	0/0:17,0:17:1.27:0,1,762	0/1:18,1:21:99:114,0,1342	0/1:23,1:20:96.44:96,0,1271	0/1:29,3:32:99:241,0,1892	0/0:69,0:63:99:0,112,4383	0/1:38,3:42:99:317,0,2196	0/1:31,0:30:25.46:25,0,1267	0/1:46,2:45:99:136,0,1661	0/1:36,6:42:99:352,0,2992	0/1:31,11:40:99:214,0,2627	0/1:23,6:29:99:482,0,1415	0/1:9,6:15:99:428,0,671
chr10	36256342	.	CCCATCCATCCAT	C	3117.80	PASS	AB=1.000;AC=7;AF=0.135;AN=52;BaseQRankSum=4.105;DP=1152;FS=14.431;HRun=0;HaplotypeScore=479.1570;InbreedingCoeff=0.7668;MQ=44.37;MQ0=54;MQRankSum=-6.820;QD=19.49;ReadPosRankSum=1.847;VQSLOD=0.4510;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:45,5:47:18.06:529,18,0	0/0:20,0:20:23.65:0,24,620	./.	./.	0/0:14,12:26:1.46:0,1,34	0/0:36,0:36:60.20:0,60,2246	0/0:35,0:33:48.15:0,48,1506	0/0:55,0:43:21.07:0,21,355	1/1:17,23:40:16.98:788,17,0	0/0:42,0:39:63.21:0,63,2340	0/0:21,0:21:36.07:0,36,1335	0/0:42,0:52:99:0,111,3158	0/0:60,0:56:78.80:0,79,3265	0/0:69,0:67:99:0,108,3870	0/0:58,0:57:97.56:0,98,4095	1/1:24,28:49:23.81:1518,24,0	0/1:18,0:18:44.75:426,0,45	0/0:21,0:22:53.21:0,53,2043	0/0:29,0:25:24.54:0,25,683	0/0:35,0:34:43.65:0,44,1861	0/0:79,0:72:99:0,120,4944	0/0:42,0:40:49.83:0,50,1633	0/0:20,0:30:21.79:0,22,611	0/0:24,0:52:60.21:0,60,2103	0/0:45,0:45:74.81:0,75,3028	0/0:43,0:41:59.73:0,60,2263	0/0:33,0:33:51.21:0,51,1995	0/0:15,0:15:27.09:0,27,1390
chr10	36256480	.	TATCCATCCATCC	T	6883.43	PASS	AB=0.686;AC=32;AF=0.615;AN=52;BaseQRankSum=-4.139;DP=952;FS=11.610;HRun=0;HaplotypeScore=258.3055;InbreedingCoeff=-0.2606;MQ=53.65;MQ0=34;MQRankSum=1.314;QD=8.88;ReadPosRankSum=1.259;VQSLOD=2.3059;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:22,1:46:67.11:67,0,198	1/1:7,11:18:6.02:162,6,0	./.	./.	0/0:17,0:19:3.09:0,3,26	1/1:17,18:35:8.96:184,9,0	1/1:26,0:26:38.91:436,39,0	0/1:40,0:29:8.61:165,0,9	0/1:13,0:37:85.53:145,0,86	0/1:17,10:26:39.52:433,0,40	0/1:3,10:13:9.45:26,0,9	0/1:10,0:35:20.83:331,0,21	0/1:16,24:40:27.79:684,0,28	0/1:26,27:53:9.81:838,0,10	1/1:22,34:55:29.97:658,30,0	1/1:13,0:51:15.05:360,15,0	0/1:21,0:43:59.55:137,0,60	0/1:10,13:23:10.56:154,0,11	1/1:9,9:15:25.77:496,26,0	1/1:12,18:30:38.58:348,39,0	1/1:29,29:54:11.77:72,12,0	0/1:11,21:32:19.55:135,0,20	0/0:16,0:18:0.26:0,0,1	0/0:18,0:43:2.97:0,3,21	0/1:7,12:19:8.09:84,0,8	0/1:18,19:35:99:806,0,103	1/1:10,16:26:5.95:121,6,0	0/1:9,0:9:10.29:41,0,10
chr10	36257418	.	T	TA	558.47	PASS	AB=0.893;AC=12;AF=0.214;AN=56;BaseQRankSum=-1.229;DP=522;FS=0.000;HRun=14;HaplotypeScore=82.3177;InbreedingCoeff=0.2808;MQ=81.18;MQ0=3;MQRankSum=-0.851;QD=3.34;ReadPosRankSum=-0.468;VQSLOD=0.3766;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:3,0:25:32.58:0,33,94	0/0:11,0:11:26.44:0,26,167	0/0:27,0:19:11.67:0,12,68	0/1:24,0:17:12.36:12,0,24	1/1:9,10:19:27.32:214,27,0	0/0:19,0:21:49.27:0,49,313	0/0:11,0:14:32.66:0,33,191	0/0:26,0:28:20.33:0,20,211	1/1:3,6:9:11.95:98,12,0	0/1:17,2:19:15.80:16,0,138	0/0:15,0:17:27.62:0,28,165	0/1:12,0:12:5.33:5,0,78	0/0:12,0:12:23.58:0,24,154	0/1:13,2:15:21.07:21,0,128	0/0:23,0:24:22.58:0,23,250	0/1:7,10:18:18.03:132,0,18	1/1:5,18:25:3.03:200,3,0	0/0:21,0:21:5.08:0,5,166	0/0:19,0:21:34.32:0,34,206	0/0:14,0:17:23.69:0,24,133	0/0:16,0:17:34.39:0,34,217	0/1:19,2:23:16.24:16,0,145	0/0:21,1:24:22.81:0,23,267	0/0:14,0:15:29.45:0,29,191	0/0:19,1:21:13.97:0,14,210	0/0:13,0:15:5.64:0,6,139	0/0:18,0:19:8.50:0,9,156	0/0:6,0:6:12.56:0,13,92
chr10	36259803	.	AAATGG	A	6814.97	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=13.744;DP=550;FS=0.394;HRun=0;HaplotypeScore=104.8447;InbreedingCoeff=0.9982;MQ=78.77;MQ0=0;MQRankSum=-4.784;QD=55.86;ReadPosRankSum=3.322;VQSLOD=5.5349;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:93.32:0,93,2934	0/0:7,0:7:21.04:0,21,579	0/0:10,0:10:30.10:0,30,923	0/0:18,0:18:51.18:0,51,1529	1/1:0,15:15:39.13:846,39,0	0/0:30,0:29:87.30:0,87,2708	0/0:16,0:16:48.16:0,48,1456	0/0:24,0:24:72.25:0,72,2285	1/1:0,11:11:33.11:706,33,0	0/0:35,0:35:99:0,99,3063	0/0:21,0:21:63.22:0,63,1985	1/1:1,16:17:45.15:977,45,0	0/0:13,0:13:36.12:0,36,1130	0/0:19,0:19:57.20:0,57,1804	0/0:16,0:16:45.15:0,45,1425	1/1:3,21:24:60.21:1294,60,0	1/1:1,18:19:48.16:1042,48,0	0/0:18,0:18:54.19:0,54,1704	0/0:22,0:22:66.23:0,66,2026	0/0:27,0:27:75.26:0,75,2354	0/0:15,0:15:45.14:0,45,1312	0/0:21,0:21:60.21:0,60,1841	1/1:0,22:22:60.21:1299,60,0	1/1:2,12:14:30.10:652,30,0	0/0:19,0:19:57.20:0,57,1807	0/0:25,0:25:75.25:0,75,2309	0/0:33,0:33:99:0,99,3037	0/0:7,0:7:21.07:0,21,666
chr10	36260202	.	AGTGATG	A	14875.98	PASS	AB=0.633;AC=47;AF=0.870;AN=54;BaseQRankSum=6.291;DP=649;FS=9.073;HRun=0;HaplotypeScore=155.0108;InbreedingCoeff=0.8357;MQ=51.71;MQ0=6;MQRankSum=-5.808;QD=27.50;ReadPosRankSum=0.778;VQSLOD=4.0023;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:45:99:0,114,2881	1/1:1,1:2:3.01:65,3,0	0/0:28,0:18:47.06:0,47,730	0/0:27,0:10:24.06:0,24,472	1/1:6,20:26:26.96:417,27,0	1/1:2,19:21:33.11:637,33,0	1/1:2,25:27:12.04:226,12,0	1/1:15,21:36:60.16:997,60,0	1/1:5,22:27:47.99:1002,48,0	1/1:7,18:24:48.13:893,48,0	1/1:5,18:23:15.72:324,16,0	1/1:8,18:26:51.17:998,51,0	1/1:3,22:25:51.17:1045,51,0	1/1:6,17:23:48.16:943,48,0	1/1:6,15:21:39.13:840,39,0	1/1:8,12:20:24.08:508,24,0	1/1:5,14:19:12.08:440,12,0	1/1:5,12:17:21.07:454,21,0	1/1:4,12:16:36.12:660,36,0	1/1:3,14:17:20.99:336,21,0	0/1:13,18:30:0.27:0,0,0	1/1:5,18:23:33.11:633,33,0	1/1:7,9:16:5.98:85,6,0	1/1:3,17:20:14.72:261,15,0	1/1:3,19:22:30.10:601,30,0	1/1:5,29:34:87.29:1725,87,0	1/1:6,18:24:39.07:787,39,0	./.
chr10	36263243	.	CCT	C	1469.19	PASS	AB=0.931;AC=16;AF=0.286;AN=56;BaseQRankSum=2.484;DP=481;FS=2.147;HRun=0;HaplotypeScore=71.5819;InbreedingCoeff=0.5230;MQ=55.05;MQ0=22;MQRankSum=2.957;QD=10.57;ReadPosRankSum=2.178;VQSLOD=3.0998;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:20,0:19:15.61:16,0,245	0/1:4,1:5:24.77:25,0,100	0/0:51,0:14:11.76:0,12,106	0/0:74,0:16:5.80:0,6,43	1/1:18,2:20:38.91:450,39,0	0/0:13,0:13:27.09:0,27,438	0/0:14,0:14:27.09:0,27,435	0/0:22,0:20:39.12:0,39,594	1/1:6,7:13:9.03:106,9,0	0/0:15,0:14:22.33:0,22,328	0/1:7,1:7:21.62:22,0,179	1/1:3,3:6:3.01:37,3,0	0/0:18,0:18:25.84:0,26,436	0/0:18,0:17:17.80:0,18,275	0/0:20,0:19:21.06:0,21,308	1/1:9,5:14:22.05:259,22,0	1/1:14,5:17:39.50:431,40,0	0/0:10,0:10:18.69:0,19,253	0/0:7,0:7:18.06:0,18,271	0/0:10,0:10:3.12:0,3,114	0/0:9,0:8:3.01:0,3,49	0/1:15,0:15:11.03:11,0,319	0/0:4,9:13:0:0,0,0	1/1:13,6:19:24.08:293,24,0	0/0:12,0:12:18.05:0,18,264	0/0:17,0:17:35.01:0,35,499	0/0:9,0:9:15.05:0,15,234	0/0:10,0:9:18.06:0,18,287
chr10	36263260	.	CTA	C	624.75	PASS	AB=1.000;AC=16;AF=0.286;AN=56;BaseQRankSum=5.789;DP=450;FS=4.447;HRun=0;HaplotypeScore=79.9095;InbreedingCoeff=0.5097;MQ=42.39;MQ0=28;MQRankSum=2.368;QD=4.19;ReadPosRankSum=1.057;VQSLOD=2.0573;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:15,0:13:0.92:1,0,254	0/1:6,0:6:31.87:32,0,99	0/0:39,0:4:11.30:0,11,109	0/0:60,0:5:6.47:0,6,40	1/1:30,1:31:36.73:198,37,0	0/0:14,0:14:20.99:0,21,507	0/0:14,0:14:27.55:0,28,498	0/0:20,0:17:25.85:0,26,686	1/1:11,1:12:8.60:61,9,0	0/0:11,1:11:3.68:0,4,351	0/0:9,1:9:3.10:0,3,201	1/1:6,0:6:2.61:12,3,0	0/0:19,0:18:1.02:0,1,473	0/0:19,0:18:25.71:0,26,320	0/0:11,0:10:18.03:0,18,281	1/1:17,1:18:10.93:105,11,0	1/1:18,5:21:18.28:269,18,0	0/0:7,0:7:8.14:0,8,295	0/0:9,0:7:10.81:0,11,298	0/1:5,0:5:8.83:9,0,95	0/0:7,0:6:3.01:0,3,60	0/0:16,0:16:9.12:0,9,412	0/1:10,0:10:0.13:0,0,1	1/1:22,1:22:10.72:104,11,0	0/0:9,0:9:20.45:0,20,268	0/0:17,0:16:40.09:0,40,597	0/0:10,0:10:2.08:0,2,215	0/0:8,0:7:18.05:0,18,313
chr10	36263261	.	TAC	T	273.04	PASS	AB=0.900;AC=10;AF=0.179;AN=56;BaseQRankSum=2.334;DP=446;FS=12.051;HRun=0;HaplotypeScore=80.4326;InbreedingCoeff=-0.2580;MQ=42.18;MQ0=30;MQRankSum=-3.807;QD=1.48;ReadPosRankSum=-1.332;VQSLOD=0.2288;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:13:15.50:0,15,183	0/1:4,2:6:78.10:78,0,79	0/0:39,0:4:5.20:0,5,74	0/1:58,1:5:7.55:8,0,29	0/1:29,2:31:66.15:85,0,66	0/0:13,1:14:26.86:0,27,365	0/0:12,2:14:25.38:0,25,371	0/0:20,0:17:15.24:0,15,553	0/1:11,1:12:8.71:9,0,18	0/1:12,0:11:31:31,0,249	0/0:9,1:9:14.20:0,14,165	0/0:5,1:6:2.88:0,3,15	0/1:16,4:18:25.13:25,0,318	0/0:18,1:18:21.07:0,21,225	0/0:11,0:9:11.86:0,12,172	0/0:16,2:18:8.94:0,9,75	0/1:22,1:21:32.92:105,0,33	0/1:8,0:7:14.91:15,0,210	0/0:9,0:7:17.61:0,18,209	0/1:5,0:5:33.58:34,0,70	0/0:6,1:6:3.01:0,3,50	0/0:14,1:15:26.09:0,26,326	0/0:11,0:11:3.01:0,3,37	0/0:21,2:22:4.58:0,5,73	0/0:8,0:8:6.30:0,6,181	0/0:17,0:16:34.92:0,35,439	0/1:3,5:8:21.13:21,0,132	0/0:6,0:6:15.04:0,15,221
chr10	36263263	.	CCTCTCT	C	294.50	PASS	AB=0.940;AC=11;AF=0.289;AN=38;BaseQRankSum=-0.486;DP=461;FS=24.849;HRun=0;HaplotypeScore=99.1992;InbreedingCoeff=0.2357;MQ=39.30;MQ0=38;MQRankSum=2.323;QD=2.43;ReadPosRankSum=4.197;VQSLOD=-0.3979;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/0:4,0:5:0.07:0,0,1	./.	./.	0/0:31,0:31:0.47:0,0,1	1/1:16,0:16:0.32:39,0,0	0/0:17,0:16:0.34:0,0,1	./.	0/0:13,0:13:0:0,0,0	0/0:10,0:11:6.02:0,6,91	0/0:14,0:11:0.46:0,0,1	0/0:7,0:7:0.47:0,0,1	0/0:17,0:16:6.72:0,7,26	0/1:18,1:18:10.74:11,0,43	1/1:6,0:5:2.97:20,3,0	1/1:18,1:19:7.67:68,8,0	1/1:21,3:22:15.06:192,15,0	./.	./.	0/0:7,0:7:1.41:0,1,2	./.	0/1:16,0:16:10.13:10,0,56	0/0:12,0:11:3:0,3,27	0/0:24,1:24:6:0,6,70	./.	0/1:16,0:16:8.18:59,0,8	0/0:9,0:8:1.55:0,2,5	./.
chr10	36263281	.	T	TAC	32.79	PASS	AB=0.990;AC=6;AF=0.107;AN=56;BaseQRankSum=3.678;DP=436;FS=7.925;HRun=0;HaplotypeScore=105.2281;InbreedingCoeff=0.1113;MQ=36.79;MQ0=47;MQRankSum=-0.587;QD=0.42;ReadPosRankSum=-1.700;VQSLOD=1.1539;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:17:12.02:0,12,150	0/0:8,0:6:18.05:0,18,219	0/0:18,0:2:3.01:0,3,46	0/0:32,0:5:8.51:0,9,74	0/0:33,0:32:27.08:0,27,402	0/0:16,1:16:23.62:0,24,312	0/0:13,0:11:0.72:0,1,85	0/0:9,0:6:18.06:0,18,250	0/0:13,0:13:2.37:0,2,8	0/0:13,0:12:30.04:0,30,382	0/0:13,0:10:8.76:0,9,134	0/1:11,0:10:46.95:47,0,66	0/0:13,1:11:20.46:0,20,205	0/1:24,1:20:63.90:64,0,202	0/0:14,0:13:6.02:0,6,93	0/0:23,0:23:21.50:0,22,236	0/0:24,0:22:31.91:0,32,382	0/0:6,0:5:15.04:0,15,183	0/0:8,0:5:12.01:0,12,170	0/0:18,0:17:3.82:0,4,48	0/1:7,0:6:0:0,0,0	0/0:20,1:19:17.96:0,18,247	1/1:12,0:10:2.60:10,3,0	0/1:24,0:22:16.06:16,0,204	0/0:7,0:6:6.02:0,6,77	0/0:19,2:16:15.33:0,15,418	0/0:8,0:7:5.40:0,5,63	0/0:3,0:3:9.03:0,9,131
chr10	36263307	.	TCTCTCACACACA	T	486.44	PASS	AB=1.000;AC=13;AF=0.250;AN=52;BaseQRankSum=-0.773;DP=365;FS=32.668;HRun=0;HaplotypeScore=123.1794;InbreedingCoeff=0.3736;MQ=37.86;MQ0=34;MQRankSum=0.919;QD=3.58;ReadPosRankSum=-1.273;VQSLOD=0.6490;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:13:14.10:0,14,457	0/0:7,0:5:12.04:0,12,339	0/0:5,0:1:3.01:0,3,91	./.	1/1:18,0:17:2.74:28,3,0	0/1:15,0:12:12.78:13,0,268	0/1:11,0:9:0.07:0,0,0	0/0:9,0:7:17.86:0,18,335	1/1:6,0:6:3.01:38,3,0	0/0:8,0:7:12.04:0,12,408	0/0:15,0:11:3.01:0,3,100	0/0:15,0:14:16.15:0,16,173	0/0:9,0:8:5.28:0,5,29	0/0:21,0:16:12.51:0,13,275	1/1:14,0:13:0.47:1,0,0	1/1:11,16:27:12.06:188,12,0	1/1:27,0:25:22.03:327,22,0	0/0:3,0:2:6.02:0,6,180	0/0:3,0:2:6.02:0,6,227	0/0:20,0:19:9.22:0,9,273	0/0:8,0:7:2.05:0,2,130	0/0:16,0:14:6.02:0,6,142	0/1:18,0:17:28.52:29,0,56	0/0:24,0:21:9.70:0,10,109	./.	0/0:20,0:14:2.42:0,2,712	0/0:10,0:9:7.84:0,8,179	0/0:5,0:3:3.01:0,3,99
chr10	36263311	.	TCACACACA	T	188.45	PASS	AB=0.983;AC=11;AF=0.196;AN=56;BaseQRankSum=0.759;DP=425;FS=1.565;HRun=0;HaplotypeScore=127.8716;InbreedingCoeff=0.2576;MQ=37.38;MQ0=35;MQRankSum=2.051;QD=1.50;ReadPosRankSum=0.785;VQSLOD=2.0375;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:16:20.38:0,20,647	0/0:7,0:5:12.04:0,12,335	0/0:8,0:4:9.03:0,9,256	0/0:7,0:1:3.01:0,3,111	1/1:7,0:16:3:28,3,0	0/0:16,0:13:15.02:0,15,477	0/1:16,0:14:0:0,0,0	0/0:14,0:12:29.97:0,30,752	1/1:5,0:5:3.01:38,3,0	0/0:17,0:16:39.13:0,39,1072	0/0:16,0:12:2.99:0,3,100	0/1:16,0:15:11.62:12,0,76	0/0:10,0:9:2.99:0,3,24	0/0:22,0:17:9.03:0,9,233	0/0:16,0:15:2.75:0,3,99	1/1:27,0:27:0.19:68,0,0	1/1:13,13:24:3.53:138,4,0	0/0:3,0:2:6.02:0,6,162	0/0:6,0:4:9.03:0,9,292	0/0:24,0:23:8.73:0,9,272	0/0:10,0:9:2.54:0,3,113	0/0:18,0:16:3.01:0,3,100	0/1:18,0:18:28.44:28,0,47	0/0:22,0:21:9.51:0,10,82	0/0:17,0:15:2.52:0,3,99	0/0:28,0:21:48.16:0,48,1308	0/0:11,0:10:6.02:0,6,174	0/0:5,0:3:3.01:0,3,99
chr10	36264366	.	AT	A	12876.30	PASS	AB=0.917;AC=51;AF=0.911;AN=56;BaseQRankSum=-10.261;DP=618;FS=10.505;HRun=2;HaplotypeScore=83.9903;InbreedingCoeff=0.7383;MQ=79.65;MQ0=4;MQRankSum=-3.101;QD=23.80;ReadPosRankSum=4.903;VQSLOD=3.5716;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:30,3:33:46.90:223,0,47	1/1:1,3:4:9.03:116,9,0	0/0:38,0:29:23.49:0,23,459	0/0:38,0:27:26.60:0,27,291	1/1:6,24:31:70.45:852,70,0	1/1:1,25:26:60.17:756,60,0	1/1:3,13:16:19.40:337,19,0	1/1:2,25:27:75.12:875,75,0	1/1:0,15:15:27.09:347,27,0	1/1:1,20:21:57.15:704,57,0	1/1:3,13:16:36.66:398,37,0	1/1:22,0:23:38.44:195,38,0	1/1:1,19:20:39.11:486,39,0	1/1:1,19:20:45.15:579,45,0	1/1:2,22:24:40.56:538,41,0	1/1:2,20:22:45.92:599,46,0	1/1:1,24:25:57.14:714,57,0	1/1:3,10:13:19.77:351,20,0	1/1:4,22:26:65.95:781,66,0	1/1:1,26:27:77.65:817,78,0	1/1:2,18:20:39.09:472,39,0	1/1:0,18:18:53.92:613,54,0	1/1:25,0:25:14.28:102,14,0	1/1:16,0:16:25.76:133,26,0	1/1:0,21:21:39.13:503,39,0	1/1:0,23:23:69.07:768,69,0	1/1:2,22:25:37.58:479,38,0	1/1:1,3:4:12.02:139,12,0
chr10	36264762	.	TGG	T	1432.30	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=7.497;DP=468;FS=9.098;HRun=11;HaplotypeScore=71.6214;InbreedingCoeff=0.9668;MQ=82.80;MQ0=0;MQRankSum=-1.543;QD=14.47;ReadPosRankSum=5.485;VQSLOD=1.3311;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:39:73.16:338,73,0	0/0:7,0:8:22.34:0,22,253	0/0:17,0:19:37.70:0,38,393	0/0:16,0:17:17.50:0,17,357	0/0:16,0:18:34.92:0,35,387	0/0:11,0:11:27.05:0,27,334	0/0:14,0:19:33.58:0,34,354	0/0:17,0:17:35.92:0,36,381	0/0:22,0:27:60.45:0,60,674	0/0:12,0:12:16.86:0,17,204	0/0:12,0:13:15:0,15,174	1/1:4,11:15:10.15:325,10,0	0/0:15,0:16:32.56:0,33,410	0/0:18,0:19:35.54:0,36,394	0/0:21,0:25:58.56:0,59,720	0/0:18,0:21:56.16:0,56,802	0/0:19,0:20:47.61:0,48,643	0/0:14,0:14:24.08:0,24,369	0/0:7,0:8:17.54:0,18,219	0/0:11,0:13:32.52:0,33,381	0/0:9,0:9:17.62:0,18,235	0/0:8,0:8:20.55:0,21,266	1/1:4,24:28:57.14:606,57,0	1/1:2,15:17:30.07:319,30,0	0/0:21,0:22:45.48:0,45,572	0/0:11,0:11:23.50:0,24,247	0/0:10,0:13:32.05:0,32,374	0/0:8,0:9:20.49:0,20,319
chr10	36266042	.	C	CAATGCTTT	46279.18	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-11.492;DP=650;FS=0.000;HRun=0;HaplotypeScore=123.3776;InbreedingCoeff=0.9851;MQ=79.57;MQ0=0;MQRankSum=-14.512;QD=89.51;ReadPosRankSum=0.753;VQSLOD=5.3580;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:79.81:0,80,2124	1/1:2,7:11:24:950,24,0	0/0:25,0:25:57.11:0,57,1450	0/0:21,0:21:63.11:0,63,1508	1/1:4,25:40:84.19:3233,84,0	1/1:4,23:32:78.27:3333,78,0	1/1:3,10:17:36.12:1558,36,0	1/1:10,21:41:99:3718,102,0	1/1:0,13:22:36.12:1603,36,0	1/1:7,23:39:99:3978,102,0	1/1:4,18:29:72.16:2865,72,0	0/0:19,0:19:48.15:0,48,1302	1/1:2,13:18:42.62:1848,43,0	1/1:2,15:21:51.18:2238,51,0	1/1:3,13:18:39.13:1736,39,0	1/1:4,12:27:39.13:1666,39,0	1/1:3,10:23:36.07:1487,36,0	1/1:4,3:13:18.06:802,18,0	1/1:6,5:22:63.20:2271,63,0	1/1:3,24:42:96.12:3481,96,0	1/1:3,5:13:21.07:783,21,0	1/1:2,9:13:27.01:1084,27,0	0/0:16,0:16:48.16:0,48,1376	0/0:22,0:22:63.14:0,63,1553	1/1:1,14:20:39.13:1665,39,0	1/1:4,20:29:83.82:3495,84,0	1/1:6,13:24:51.18:2084,51,0	1/1:0,3:3:9.03:401,9,0
chr10	36268032	.	G	GATTTATTT	3159.44	PASS	AB=1.000;AC=33;AF=0.917;AN=36;BaseQRankSum=-3.278;DP=224;FS=0.000;HRun=0;HaplotypeScore=76.6130;InbreedingCoeff=-0.0014;MQ=59.43;MQ0=1;MQRankSum=-1.564;QD=16.63;ReadPosRankSum=-0.664;VQSLOD=1.8521;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:14,0:17:65.40:65,0,130	./.	./.	./.	1/1:3,0:7:9.03:114,9,0	1/1:6,4:11:15.05:610,15,0	./.	1/1:34,0:33:17.99:282,18,0	./.	1/1:6,3:9:12.04:488,12,0	1/1:6,0:6:6.02:244,6,0	0/0:5,0:5:0.89:0,1,2	1/1:5,0:5:3:25,3,0	1/1:3,1:4:6.02:242,6,0	./.	1/1:2,0:4:2.99:24,3,0	1/1:12,0:17:8.98:73,9,0	1/1:17,4:21:6.02:207,6,0	1/1:15,1:17:6.02:244,6,0	./.	./.	1/1:1,0:1:3.01:70,3,0	./.	./.	1/1:10,2:12:3.01:122,3,0	1/1:5,0:6:3.01:104,3,0	1/1:4,2:6:3.01:122,3,0	1/1:11,0:13:6.02:209,6,0
chr10	36268537	.	A	AT	17140.50	PASS	AB=0.756;AC=44;AF=0.786;AN=56;BaseQRankSum=13.341;DP=685;FS=0.847;HRun=8;HaplotypeScore=103.6029;InbreedingCoeff=0.8104;MQ=68.80;MQ0=0;MQRankSum=-1.501;QD=29.05;ReadPosRankSum=0.192;VQSLOD=3.7511;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:69.02:0,69,626	1/1:0,11:11:30.09:346,30,0	0/1:17,1:16:11.29:11,0,229	0/0:8,0:7:5.10:0,5,99	1/1:1,29:30:84.18:952,84,0	1/1:1,22:23:57.17:658,57,0	1/1:4,12:17:31.34:349,31,0	1/1:5,34:39:99:1176,102,0	1/1:2,21:23:60.18:690,60,0	1/1:1,39:40:99:1364,120,0	1/1:0,28:29:86.92:925,87,0	0/0:25,0:25:69.02:0,69,626	1/1:0,25:25:69.21:796,69,0	1/1:0,21:21:57.17:658,57,0	1/1:3,29:32:81.24:935,81,0	1/1:4,23:27:57.17:658,57,0	1/1:4,31:35:90.27:1038,90,0	0/1:5,17:22:0.77:499,0,1	1/1:4,18:22:60.12:657,60,0	1/1:2,35:37:99:1180,105,0	1/1:1,8:9:24.07:277,24,0	1/1:0,25:26:75.22:862,75,0	0/0:26,0:26:72.04:0,72,659	0/0:11,0:11:29.73:0,30,248	1/1:1,16:17:39.12:450,39,0	1/1:0,32:32:93.28:1072,93,0	1/1:3,39:42:99:1277,111,0	1/1:0,12:12:27.08:312,27,0
chr10	36270106	.	CCACA	C	682.88	PASS	AC=8;AF=0.154;AN=52;BaseQRankSum=-0.196;DP=625;FS=8.852;HRun=0;HaplotypeScore=124.0006;InbreedingCoeff=0.7781;MQ=64.57;MQ0=12;MQRankSum=-0.710;QD=7.85;ReadPosRankSum=0.177;VQSLOD=1.9175;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:40:3.01:0,3,54	0/0:12,0:12:9.03:0,9,150	./.	./.	1/1:14,2:15:12.01:160,12,0	0/0:19,0:18:15.02:0,15,172	0/0:22,0:22:21.05:0,21,335	0/0:22,0:20:13.59:0,14,165	1/1:18,6:26:11.88:122,12,0	0/0:21,0:21:28.32:0,28,407	0/0:21,0:21:8.06:0,8,104	0/0:24,0:23:9.03:0,9,141	0/0:23,0:22:18.04:0,18,285	0/0:19,0:19:24.05:0,24,363	0/0:26,0:26:12.04:0,12,198	1/1:11,7:18:15.05:232,15,0	1/1:18,9:26:23.59:316,24,0	0/0:16,0:17:13.29:0,13,226	0/0:17,0:17:15.05:0,15,243	0/0:12,0:12:6.02:0,6,97	0/0:28,0:29:21.05:0,21,367	0/0:28,0:28:25.13:0,25,346	0/0:19,0:19:6.02:0,6,79	0/0:28,0:28:12.03:0,12,172	0/0:19,0:18:30.10:0,30,497	0/0:22,0:22:18.06:0,18,333	0/0:22,0:21:15.03:0,15,229	0/0:8,0:7:9.03:0,9,147
chr10	36270147	.	C	CACACAG	4832.79	PASS	AB=0.705;AC=39;AF=0.696;AN=56;BaseQRankSum=-1.183;DP=706;FS=0.484;HRun=0;HaplotypeScore=160.8497;InbreedingCoeff=-0.1568;MQ=73.27;MQ0=12;MQRankSum=-2.505;QD=7.68;ReadPosRankSum=3.226;VQSLOD=3.7319;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:39,0:38:41.95:352,42,0	0/1:2,0:10:15.72:20,0,16	0/0:31,0:19:39.96:0,40,388	0/0:46,0:29:74.71:0,75,698	0/1:13,0:12:49.28:117,0,49	1/1:4,0:24:6.02:95,6,0	0/1:5,0:29:56.17:105,0,56	1/1:27,0:26:65.84:551,66,0	0/1:17,0:17:50.33:70,0,50	1/1:22,0:22:8.77:333,9,0	1/1:3,0:18:5.90:59,6,0	1/1:6,14:22:9.02:177,9,0	1/1:4,1:23:12:209,12,0	0/1:8,0:28:11.80:130,0,12	0/1:5,0:26:35.46:131,0,35	0/1:17,0:17:59.55:110,0,60	0/1:34,0:33:83.13:311,0,83	0/1:3,0:24:34.82:84,0,35	1/1:5,0:18:19.37:353,19,0	1/1:4,0:15:5.69:58,6,0	0/1:17,0:59:52.61:53,0,65	0/1:9,0:37:7.08:149,0,7	0/1:7,9:17:3.99:95,0,4	1/1:10,19:37:0.21:235,0,0	1/1:25,0:24:51.29:448,51,0	1/1:5,0:19:17.54:322,18,0	1/1:12,0:11:1.44:172,1,0	0/1:5,0:11:12.02:95,0,12
chr10	36270343	.	AC	A	2252.44	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=9.044;DP=607;FS=7.670;HRun=5;HaplotypeScore=67.4524;InbreedingCoeff=0.9983;MQ=83.35;MQ0=0;MQRankSum=-0.585;QD=26.19;ReadPosRankSum=1.689;VQSLOD=3.4308;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:84.23:0,84,1098	0/0:11,0:11:33.10:0,33,436	0/0:27,1:26:39.10:0,39,759	0/0:18,0:18:19.70:0,20,362	1/1:0,17:17:48.14:543,48,0	0/0:23,0:23:69.23:0,69,942	0/0:20,0:20:57.17:0,57,761	0/0:26,0:26:72.24:0,72,984	1/1:1,22:23:51.14:577,51,0	0/0:26,0:26:72.23:0,72,973	0/0:15,0:15:36.11:0,36,477	0/0:23,0:23:66.21:0,66,881	0/0:20,0:20:54.16:0,54,720	0/0:32,0:32:93.28:0,93,1237	0/0:23,0:23:66.20:0,66,879	1/1:0,19:19:42.12:476,42,0	1/1:1,26:27:72.21:817,72,0	0/0:18,0:18:51.17:0,51,697	0/0:19,0:19:45.14:0,45,600	0/0:20,0:20:54.18:0,54,736	0/0:13,0:13:36.12:0,36,492	0/0:22,0:22:57.19:0,57,778	0/0:21,0:21:60.16:0,60,772	0/0:17,0:17:48.16:0,48,655	0/0:25,0:25:75.25:0,75,1018	0/0:31,0:31:93.31:0,93,1261	0/0:19,0:19:51.17:0,51,696	0/0:18,0:18:54.18:0,54,738
chr10	36271248	.	C	CAA	7283.02	PASS	AB=0.697;AC=48;AF=0.857;AN=56;BaseQRankSum=0.152;DP=671;FS=13.572;HRun=14;HaplotypeScore=102.8382;InbreedingCoeff=0.4325;MQ=73.33;MQ0=3;MQRankSum=-2.318;QD=11.82;ReadPosRankSum=-2.375;VQSLOD=1.7060;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:42:38.25:0,38,513	1/1:5,6:12:22.31:264,22,0	0/0:11,0:13:11.18:0,11,61	0/1:17,0:14:2.12:2,0,38	1/1:10,1:28:17.26:171,17,0	1/1:4,15:22:39.11:488,39,0	1/1:5,19:26:6.38:291,6,0	1/1:19,2:34:58.77:533,59,0	1/1:3,0:24:21.53:88,22,0	1/1:4,13:18:41.40:465,41,0	1/1:1,9:12:28.71:284,29,0	1/1:8,13:25:6.66:261,7,0	1/1:10,14:25:19.87:189,20,0	1/1:5,14:20:10.85:123,11,0	1/1:7,19:29:23.37:247,23,0	0/1:11,0:29:62.19:74,0,62	0/1:6,1:30:19.40:87,0,19	1/1:5,12:19:24.55:305,25,0	1/1:11,7:20:33.07:390,33,0	1/1:5,9:19:7.27:285,7,0	0/1:9,14:23:1.67:221,0,2	1/1:6,14:23:38.47:398,38,0	1/1:4,15:25:11.68:339,12,0	1/1:3,20:27:29.45:351,29,0	1/1:6,17:26:42.05:471,42,0	1/1:31,4:40:67.32:636,67,0	1/1:3,21:29:31.74:310,32,0	1/1:6,0:9:2.37:9,2,0
chr10	36271473	.	C	CT	15892.01	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=2.975;DP=725;FS=7.749;HRun=7;HaplotypeScore=94.9256;InbreedingCoeff=0.9965;MQ=84.14;MQ0=0;MQRankSum=-3.516;QD=30.04;ReadPosRankSum=0.824;VQSLOD=4.6676;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:68,0:68:99:0,192,1839	1/1:1,11:12:33.10:399,33,0	0/0:23,0:23:54.07:0,54,510	0/0:24,0:24:44.72:0,45,400	1/1:6,26:32:72.14:835,72,0	1/1:2,25:27:57.17:689,57,0	1/1:2,21:23:60.18:725,60,0	1/1:5,32:37:93.27:1112,93,0	1/1:3,23:26:62.40:731,62,0	1/1:7,28:35:81.25:977,81,0	1/1:4,15:19:45.14:543,45,0	0/0:26,0:26:66.10:0,66,637	1/1:3,26:29:75.23:904,75,0	1/1:1,26:27:66.20:797,66,0	1/1:1,16:17:45.14:544,45,0	1/1:0,31:31:87.27:1051,87,0	1/1:3,30:33:87.27:1051,87,0	1/1:4,23:27:66.20:797,66,0	1/1:3,20:24:63.03:717,63,0	1/1:1,17:18:51.16:616,51,0	1/1:1,16:17:48.15:580,48,0	1/1:0,18:18:48.15:580,48,0	0/0:17,0:17:39.03:0,39,371	0/0:38,0:38:99:0,105,1005	1/1:0,16:16:42.13:507,42,0	1/1:5,25:30:72.22:868,72,0	1/1:4,19:23:57.17:689,57,0	1/1:2,6:8:14.79:181,15,0
chr10	36281946	.	A	AG	20214.65	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-12.240;DP=650;FS=3.886;HRun=3;HaplotypeScore=56.1783;InbreedingCoeff=0.9933;MQ=88.89;MQ0=0;MQRankSum=-8.004;QD=36.36;ReadPosRankSum=4.044;VQSLOD=5.3957;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,123,1473	1/1:0,5:5:15.05:210,15,0	0/0:19,0:19:51.13:0,51,587	0/0:28,0:28:81.16:0,81,923	1/1:1,29:30:78.26:1092,78,0	1/1:2,16:18:36.12:504,36,0	1/1:1,27:28:63.21:882,63,0	1/1:2,33:35:99:1366,99,0	1/1:0,23:23:60.03:840,60,0	1/1:2,20:22:60.19:822,60,0	1/1:0,12:12:33.10:444,33,0	1/1:3,15:18:42.14:582,42,0	1/1:2,18:20:54.17:738,54,0	1/1:2,22:24:60.20:840,60,0	1/1:2,27:29:75.25:1050,75,0	1/1:2,30:32:81.27:1134,81,0	1/1:1,40:41:99:1554,111,0	1/1:0,21:21:57.19:798,57,0	1/1:2,19:21:57.19:796,57,0	1/1:1,17:18:51.17:714,51,0	1/1:2,27:29:75.25:1050,75,0	1/1:2,19:21:51.08:684,51,0	1/1:0,18:18:45.15:630,45,0	1/1:1,25:26:72.24:1008,72,0	1/1:1,12:13:30.10:420,30,0	1/1:0,13:13:39.13:546,39,0	1/1:2,29:31:84.28:1176,84,0	1/1:1,7:8:24.08:332,24,0
chr10	36282332	.	T	TTTCC	3708.52	PASS	AB=0.583;AC=5;AF=0.089;AN=56;BaseQRankSum=-6.935;DP=637;FS=6.966;HRun=0;HaplotypeScore=105.5015;InbreedingCoeff=0.7563;MQ=69.30;MQ0=0;MQRankSum=-0.537;QD=46.94;ReadPosRankSum=-0.548;VQSLOD=4.0933;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:29.29:0,29,987	0/0:12,0:12:30.10:0,30,506	0/0:22,0:22:42.13:0,42,642	0/0:17,0:16:14.97:0,15,291	0/0:24,0:24:45.15:0,45,704	0/0:27,0:27:69.23:0,69,1118	0/0:19,0:19:51.17:0,51,855	0/0:31,0:31:69.23:0,69,1091	0/0:25,0:25:63.20:0,63,1034	0/0:29,0:29:69.24:0,69,1165	0/0:22,0:22:48.16:0,48,757	1/1:7,22:30:12.52:1356,13,0	0/0:26,0:26:66.23:0,66,1110	0/0:18,0:18:48.16:0,48,804	0/0:21,0:21:51.16:0,51,823	0/0:29,0:29:66.23:0,66,1114	0/0:22,0:22:45.14:0,45,735	0/0:24,0:24:49.09:0,49,890	0/0:24,0:24:60.21:0,60,1002	0/0:22,0:22:63.21:0,63,1049	0/0:21,0:21:54.18:0,54,905	0/0:18,0:18:39.13:0,39,652	0/1:4,10:14:20.56:638,0,21	1/1:6,29:35:24.61:1714,25,0	0/0:20,0:20:51.16:0,51,816	0/0:26,0:26:57.18:0,57,938	0/0:24,0:23:63.21:0,63,1036	0/0:7,0:7:14.79:0,15,246
chr10	36282710	.	GTTTTTT	G	17173.16	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=3.841;DP=557;FS=28.109;HRun=16;HaplotypeScore=173.7209;InbreedingCoeff=0.9605;MQ=61.47;MQ0=1;MQRankSum=-7.992;QD=34.98;ReadPosRankSum=4.454;VQSLOD=1.2228;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:26:48.09:0,48,726	1/1:1,6:7:17.76:324,18,0	0/0:24,0:14:26.98:0,27,522	0/0:15,0:14:13.32:0,13,307	1/1:1,19:20:17.23:421,17,0	1/1:2,16:18:29.52:539,30,0	1/1:4,19:23:50.93:914,51,0	1/1:8,13:21:38.10:701,38,0	1/1:2,17:19:51.05:917,51,0	1/1:5,18:23:47.27:861,47,0	1/1:1,18:19:25.95:484,26,0	1/1:3,16:19:44.86:808,45,0	1/1:1,27:28:81.14:1406,81,0	1/1:4,20:24:53.91:970,54,0	1/1:6,21:27:47.15:863,47,0	1/1:2,16:18:47.90:862,48,0	1/1:5,15:20:32.38:593,32,0	1/1:6,14:20:32.38:578,32,0	1/1:7,17:24:49.97:916,50,0	1/1:5,14:19:32.45:593,32,0	1/1:9,8:17:13.44:313,13,0	1/1:2,13:15:29.89:540,30,0	1/1:3,26:29:44.23:809,44,0	1/1:5,8:13:16.74:318,17,0	1/1:7,16:23:34.89:647,35,0	1/1:6,17:23:47.82:829,48,0	1/1:2,14:16:41.81:753,42,0	1/1:2,4:6:11.73:216,12,0
chr10	36283467	.	TC	T	11844.94	PASS	AB=0.947;AC=53;AF=0.946;AN=56;BaseQRankSum=-4.653;DP=556;FS=0.973;HRun=7;HaplotypeScore=88.5159;InbreedingCoeff=0.6101;MQ=75.05;MQ0=5;MQRankSum=-2.577;QD=22.87;ReadPosRankSum=4.598;VQSLOD=4.6231;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,29:32:81.18:826,81,0	1/1:0,7:7:11.99:111,12,0	0/0:37,0:18:28.51:0,29,278	0/1:34,1:23:35.50:36,0,102	1/1:2,14:16:39.08:397,39,0	1/1:2,7:9:18.04:184,18,0	1/1:2,25:27:61.02:614,61,0	1/1:6,16:22:48.08:475,48,0	1/1:4,24:28:60.13:611,60,0	1/1:1,16:17:42.09:427,42,0	1/1:1,7:8:21.01:203,21,0	1/1:0,23:23:69.11:691,69,0	1/1:0,27:28:81.13:813,81,0	1/1:0,13:13:36.08:366,36,0	1/1:1,23:24:57.06:570,57,0	1/1:1,16:17:39.09:397,39,0	1/1:3,21:24:57.13:581,57,0	1/1:1,9:10:21.01:202,21,0	1/1:3,6:9:20.96:198,21,0	1/1:1,12:13:31.66:266,32,0	1/1:3,15:18:42.09:428,42,0	1/1:1,23:24:66.15:672,66,0	1/1:1,11:12:27.06:275,27,0	1/1:2,18:20:45.10:459,45,0	1/1:2,14:16:32.99:314,33,0	1/1:1,31:32:93.19:941,93,0	1/1:1,26:27:66.13:665,66,0	1/1:0,6:6:12.03:122,12,0
chr10	36283896	.	GTATATATATATA	G	2187.12	PASS	AB=0.675;AC=18;AF=0.500;AN=36;BaseQRankSum=-0.104;DP=262;FS=3.066;HRun=0;HaplotypeScore=93.6840;InbreedingCoeff=0.5175;MQ=71.00;MQ0=4;MQRankSum=-4.250;QD=19.02;ReadPosRankSum=2.546;VQSLOD=2.0734;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:21.05:0,21,533	./.	0/0:14,0:13:2.96:0,3,35	0/0:12,0:10:11.95:0,12,166	0/0:3,0:3:3:0,3,25	./.	0/1:9,6:15:11.95:287,0,12	1/1:10,6:13:18.05:434,18,0	./.	1/1:7,5:13:18.06:532,18,0	./.	0/0:4,0:4:3:0,3,25	1/1:8,9:17:12.04:402,12,0	1/1:8,2:13:3.01:99,3,0	./.	0/0:2,0:2:3.01:0,3,150	0/0:12,0:11:12.93:0,13,561	1/1:3,6:9:5.28:199,5,0	1/1:3,0:3:6.01:77,6,0	./.	./.	./.	./.	0/0:2,0:2:3:0,3,25	./.	1/1:9,3:12:9.03:188,9,0	1/1:6,4:10:3.48:104,3,0	0/1:3,4:7:0:0,0,0
chr10	36287297	.	G	GGT	2995.83	PASS	AB=0.613;AC=17;AF=0.304;AN=56;BaseQRankSum=1.164;DP=466;FS=12.019;HRun=0;HaplotypeScore=72.4548;InbreedingCoeff=0.9284;MQ=51.19;MQ0=37;MQRankSum=0.045;QD=22.36;ReadPosRankSum=1.523;VQSLOD=3.2047;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:24:47.88:0,48,523	0/0:7,0:6:18.06:0,18,231	0/0:18,0:10:23.97:0,24,275	0/0:28,0:14:29.34:0,29,468	1/1:20,0:20:3.01:37,3,0	0/0:15,0:15:32.75:0,33,265	0/0:21,0:18:42.09:0,42,535	0/0:19,0:15:32.78:0,33,453	1/1:14,0:14:33.11:480,33,0	0/0:16,0:15:39.07:0,39,484	0/0:9,0:7:11.97:0,12,117	1/1:17,0:16:33.11:492,33,0	0/0:17,0:15:20.98:0,21,227	0/0:15,0:14:24.07:0,24,305	0/0:21,0:20:39.18:0,39,440	1/1:13,0:13:33.10:459,33,0	1/1:16,0:16:42.13:567,42,0	0/0:18,0:16:39.13:0,39,518	0/0:21,0:17:41.84:0,42,560	0/0:9,0:9:15.05:0,15,197	0/0:24,0:22:48.14:0,48,637	0/0:17,0:15:32.88:0,33,302	0/1:7,12:19:0:0,0,0	1/1:8,0:8:21.07:268,21,0	0/0:21,0:20:42.13:0,42,574	1/1:12,0:10:24.08:367,24,0	0/0:8,0:8:14.98:0,15,155	1/1:15,0:14:36.08:524,36,0
chr10	36287301	.	T	TGT	2948.64	PASS	AC=16;AF=0.296;AN=54;BaseQRankSum=1.497;DP=540;FS=12.031;HRun=0;HaplotypeScore=95.0425;InbreedingCoeff=0.9543;MQ=47.83;MQ0=41;MQRankSum=0.539;QD=21.68;ReadPosRankSum=1.536;VQSLOD=3.2866;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:28:47.96:0,48,523	0/0:10,0:9:17.73:0,18,230	0/0:17,0:9:23.97:0,24,275	0/0:28,0:14:29.34:0,29,468	1/1:8,15:25:3.01:37,3,0	0/0:23,0:23:32.64:0,33,265	0/0:20,0:18:42.09:0,42,535	0/0:25,0:21:33.38:0,33,454	1/1:14,0:14:33.11:480,33,0	0/0:20,0:19:38.70:0,39,484	0/0:10,0:11:11.97:0,12,117	1/1:19,0:17:33.11:492,33,0	0/0:13,0:12:18.54:0,19,223	0/0:14,0:15:24.07:0,24,305	0/0:22,0:23:39.08:0,39,440	1/1:17,0:17:33.10:459,33,0	1/1:15,0:15:42.13:567,42,0	0/0:19,0:18:40.19:0,40,523	0/0:18,0:17:41.84:0,42,560	0/0:14,0:14:14.73:0,15,196	0/0:25,0:23:48.14:0,48,637	0/0:24,0:21:32.25:0,32,301	./.	1/1:10,0:9:21.07:268,21,0	0/0:23,0:22:42.13:0,42,574	1/1:14,0:14:25.90:372,26,0	0/0:14,0:14:14.87:0,15,155	1/1:19,0:17:31.89:471,32,0
chr10	36288418	.	TCCCCC	T	14589.81	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-1.766;DP=489;FS=5.211;HRun=13;HaplotypeScore=111.2721;InbreedingCoeff=0.9200;MQ=70.78;MQ0=1;MQRankSum=-4.528;QD=32.00;ReadPosRankSum=4.784;VQSLOD=3.8037;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:16,23:39:63.01:1075,63,0	1/1:1,6:7:15.04:257,15,0	0/0:16,0:14:23.90:0,24,414	0/0:17,0:14:20.73:0,21,320	1/1:7,11:18:23.98:403,24,0	1/1:6,13:19:33.05:565,33,0	1/1:5,15:20:27.07:462,27,0	1/1:10,8:18:16.17:305,16,0	1/1:3,14:17:42.09:719,42,0	1/1:3,12:15:39.11:668,39,0	1/1:4,6:10:24.06:410,24,0	1/1:4,0:19:37.37:139,37,0	1/1:0,19:19:48.16:822,48,0	1/1:3,14:17:39.09:667,39,0	1/1:2,19:21:48.15:822,48,0	1/1:1,9:10:27.09:462,27,0	1/1:3,33:36:84.27:1438,84,0	1/1:7,21:28:63.16:1079,63,0	1/1:5,9:14:26.98:410,27,0	1/1:5,15:20:39.04:668,39,0	1/1:7,14:21:38.84:668,39,0	1/1:3,10:13:30.07:513,30,0	1/1:1,0:8:14.95:55,15,0	1/1:6,0:20:29.87:111,30,0	1/1:2,14:16:33.07:565,33,0	1/1:4,15:19:45.10:769,45,0	1/1:2,8:10:27.07:435,27,0	1/1:0,2:2:6.02:103,6,0
chr10	36288514	.	A	AT	13757.85	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-11.916;DP=593;FS=4.076;HRun=8;HaplotypeScore=56.3684;InbreedingCoeff=0.9907;MQ=73.66;MQ0=0;MQRankSum=-1.637;QD=30.10;ReadPosRankSum=-0.610;VQSLOD=4.6180;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,39:41:99:1301,114,0	1/1:1,9:10:27.08:312,27,0	0/0:10,0:10:23.05:0,23,198	0/0:10,0:10:10.55:0,11,107	0/0:14,0:14:36.02:0,36,329	1/1:1,19:20:57.12:633,57,0	1/1:5,23:28:54.63:624,55,0	1/1:1,31:33:96.24:1091,96,0	0/0:16,0:16:42.02:0,42,384	1/1:5,23:28:69.12:779,69,0	1/1:0,21:21:63.19:727,63,0	1/1:1,21:22:57.17:658,57,0	1/1:4,12:16:39.10:440,39,0	1/1:2,21:23:60.18:692,60,0	1/1:3,11:14:33.10:381,33,0	0/0:15,0:15:45.01:0,45,407	0/0:38,2:40:32.82:0,33,809	1/1:1,31:32:90.27:1038,90,0	1/1:5,16:21:51.15:587,51,0	1/1:1,17:18:48.14:554,48,0	1/1:3,24:27:72.21:831,72,0	1/1:0,20:20:51.15:588,51,0	1/1:1,17:18:51.15:589,51,0	1/1:0,26:26:78.23:900,78,0	1/1:1,14:15:39.11:445,39,0	0/0:23,0:23:36.72:0,37,519	1/1:4,20:24:51.15:589,51,0	0/0:8,0:8:18.01:0,18,165
chr10	36290055	.	G	GA	6739.39	PASS	AB=0.821;AC=54;AF=0.964;AN=56;BaseQRankSum=-3.400;DP=175;FS=5.263;HRun=1;HaplotypeScore=19.8276;InbreedingCoeff=-0.0695;MQ=92.63;MQ0=0;MQRankSum=-3.246;QD=38.51;ReadPosRankSum=0.964;VQSLOD=4.1549;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,11:11:30.10:479,30,0	1/1:0,3:3:9.03:144,9,0	0/1:4,5:9:23.16:220,0,23	0/1:8,0:8:17.68:69,0,18	1/1:0,4:4:12.04:191,12,0	1/1:0,3:3:6.02:96,6,0	1/1:1,9:10:24.08:383,24,0	1/1:0,12:12:36.12:569,36,0	1/1:0,5:5:15.05:239,15,0	1/1:1,1:2:3.01:48,3,0	1/1:0,2:2:6.02:96,6,0	1/1:0,7:7:18.06:287,18,0	1/1:0,5:5:12.04:192,12,0	1/1:0,6:6:18.06:287,18,0	1/1:0,8:8:18.06:288,18,0	1/1:0,5:5:15.05:240,15,0	1/1:0,9:9:24.08:383,24,0	1/1:0,5:5:12.04:192,12,0	1/1:1,7:8:21.07:328,21,0	1/1:0,4:4:12.04:192,12,0	1/1:0,7:7:18.06:287,18,0	1/1:0,4:4:9.03:144,9,0	1/1:1,3:4:9.03:144,9,0	1/1:1,11:12:15.05:239,15,0	1/1:0,6:6:18.06:287,18,0	1/1:1,8:9:24.08:384,24,0	1/1:0,3:4:12.04:186,12,0	1/1:0,3:3:9.03:144,9,0
chr10	36290858	.	C	CTG	7080.89	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-12.860;DP=861;FS=6.522;HRun=0;HaplotypeScore=100.4877;InbreedingCoeff=0.9397;MQ=78.51;MQ0=1;MQRankSum=-1.341;QD=40.46;ReadPosRankSum=2.335;VQSLOD=6.9018;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:56:99:0,150,1993	0/0:12,0:12:33.11:0,33,446	0/0:36,0:36:86.60:0,87,1073	0/0:23,0:22:5.24:0,5,434	1/1:5,22:27:66.22:1107,66,0	0/0:26,0:25:63.21:0,63,851	0/0:30,0:30:84.26:0,84,1117	0/0:29,0:29:72.22:0,72,946	1/1:5,30:37:75.26:1290,75,0	0/0:43,0:43:99:0,120,1622	0/0:17,0:17:51.16:0,51,674	0/0:31,0:31:87.29:0,87,1175	0/0:42,0:42:99:0,123,1625	0/0:38,0:38:99:0,111,1499	0/0:34,0:34:96.30:0,96,1282	1/1:1,34:35:87.30:1525,87,0	1/1:5,39:43:99:1941,114,0	0/0:28,0:28:84.28:0,84,1133	0/0:23,0:23:60.19:0,60,794	0/0:31,0:31:84.28:0,84,1135	0/0:33,0:33:84.26:0,84,1119	0/0:33,0:33:87.27:0,87,1160	0/0:36,0:36:99:0,108,1444	0/0:34,0:34:96.32:0,96,1292	0/0:19,0:19:54.17:0,54,715	1/1:2,23:25:31.65:1165,32,0	0/0:31,0:30:84.25:0,84,1103	1/1:0,7:7:3.01:53,3,0
chr10	36291565	.	TACTC	T	2506.92	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-7.842;DP=404;FS=4.389;HRun=0;HaplotypeScore=95.0403;InbreedingCoeff=0.9581;MQ=85.30;MQ0=0;MQRankSum=-1.651;QD=36.87;ReadPosRankSum=1.085;VQSLOD=3.5456;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:78.27:0,78,2097	0/0:8,0:8:24.07:0,24,594	0/0:10,0:10:29.90:0,30,597	0/0:17,0:18:30.95:0,31,999	1/1:1,7:8:14.90:170,15,0	0/0:21,0:21:60.21:0,60,1597	0/0:15,0:15:45.14:0,45,1174	0/0:12,0:12:36.12:0,36,960	1/1:0,16:16:39.13:738,39,0	0/0:20,0:20:57.15:0,57,1488	0/0:10,0:10:30.10:0,30,813	0/0:19,0:19:57.06:0,57,1441	0/0:23,0:23:69.24:0,69,1842	0/0:13,0:13:39.10:0,39,952	0/0:19,0:19:57.16:0,57,1444	1/1:1,12:13:30.10:564,30,0	1/1:1,17:18:36.12:697,36,0	0/0:16,0:16:48.13:0,48,1253	0/0:15,0:15:45.15:0,45,1177	0/0:11,0:11:33.11:0,33,904	0/0:20,0:20:60.16:0,60,1431	0/0:8,0:8:24.08:0,24,655	0/0:7,0:7:21.07:0,21,561	0/0:15,0:15:45.15:0,45,1232	0/0:11,0:11:33.10:0,33,848	1/1:0,12:12:32.96:459,33,0	0/0:19,0:18:57.11:0,57,1420	1/1:0,1:1:3.01:58,3,0
chr10	36294346	.	AGGTTGG	A	3990.12	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=11.982;DP=637;FS=2.364;HRun=0;HaplotypeScore=150.3349;InbreedingCoeff=0.9568;MQ=87.03;MQ0=0;MQRankSum=-11.806;QD=41.56;ReadPosRankSum=-0.189;VQSLOD=3.1898;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,102,3219	0/0:5,0:5:12.04:0,12,412	0/0:28,0:28:60.11:0,60,1374	0/0:26,0:26:57.18:0,57,1682	1/1:4,16:20:24.01:482,24,0	0/0:21,0:21:48.15:0,48,1507	0/0:29,0:29:72.23:0,72,2276	0/0:22,0:22:48.16:0,48,1581	1/1:4,13:17:39.13:856,39,0	0/0:21,0:21:57.19:0,57,1790	0/0:14,0:14:36.11:0,36,1124	0/0:27,0:27:56.78:0,57,1761	0/0:19,0:19:51.15:0,51,1497	0/0:25,0:25:57.18:0,57,1775	0/0:23,0:23:60.21:0,60,2012	1/1:4,15:19:45.15:981,45,0	1/1:5,11:16:24.08:531,24,0	0/0:30,0:30:75.26:0,75,2489	0/0:20,0:21:51.15:0,51,1405	0/0:25,0:25:66.07:0,66,2077	0/0:44,0:44:99:0,114,3653	0/0:26,0:26:72.25:0,72,2401	0/0:17,0:17:36.12:0,36,1230	0/0:31,0:31:84.27:0,84,2680	0/0:18,0:18:45.15:0,45,1405	1/1:5,16:21:48.16:1077,48,0	0/0:25,0:25:72.14:0,72,2161	1/1:1,2:3:3.01:65,3,0
chr10	36294417	.	C	CG	1219.57	PASS	AB=0.681;AC=10;AF=0.179;AN=56;BaseQRankSum=6.466;DP=479;FS=8.719;HRun=0;HaplotypeScore=101.0607;InbreedingCoeff=0.7542;MQ=85.28;MQ0=0;MQRankSum=-3.762;QD=14.18;ReadPosRankSum=4.103;VQSLOD=4.8557;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:51.12:0,51,570	0/0:5,0:5:11.81:0,12,106	0/0:18,0:19:49.68:0,50,611	0/0:16,0:16:36.08:0,36,471	1/1:4,11:15:29.54:235,30,0	0/0:11,0:11:14.62:0,15,144	0/0:24,0:24:50.92:0,51,561	0/0:28,0:28:68.65:0,69,823	0/1:7,7:14:3.49:161,0,3	0/0:12,0:12:29.82:0,30,324	0/0:13,0:13:21.68:0,22,225	0/0:23,0:23:41.46:0,41,245	0/0:13,0:13:23.69:0,24,229	0/0:22,0:22:47.94:0,48,532	0/0:11,0:11:18.05:0,18,215	1/1:3,11:13:27.07:335,27,0	1/1:3,17:20:36.54:403,37,0	0/0:28,0:28:47.85:0,48,480	0/0:18,0:18:50.93:0,51,537	0/0:20,0:20:41.72:0,42,357	0/0:20,0:20:38.95:0,39,453	0/0:14,0:14:30.84:0,31,285	0/0:20,0:20:36.56:0,37,202	0/0:23,0:23:55.39:0,55,400	0/0:9,0:9:21.40:0,21,227	0/1:9,7:16:22.91:167,0,23	0/0:13,0:13:32.88:0,33,340	1/1:4,3:7:5.22:81,5,0
chr10	36294418	.	A	ACC	7975.63	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-3.035;DP=492;FS=2.083;HRun=8;HaplotypeScore=89.7643;InbreedingCoeff=0.7779;MQ=83.20;MQ0=0;MQRankSum=-5.602;QD=17.38;ReadPosRankSum=2.458;VQSLOD=3.0491;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,27:35:36.12:571,36,0	1/1:2,3:5:12.03:167,12,0	0/0:17,0:17:11.29:0,11,254	0/0:14,0:16:18.01:0,18,182	1/1:15,0:15:26.74:217,27,0	1/1:1,9:11:13.28:197,13,0	1/1:4,17:23:34.89:493,35,0	1/1:13,15:28:30.06:402,30,0	1/1:15,0:15:20.61:134,21,0	1/1:6,8:14:21.07:326,21,0	1/1:3,8:12:14.54:198,15,0	1/1:3,0:24:32.11:111,32,0	1/1:2,10:12:15.05:238,15,0	1/1:5,15:21:33.32:486,33,0	1/1:2,9:11:12.04:190,12,0	1/1:16,0:15:32.61:234,33,0	1/1:21,0:21:44.12:307,44,0	1/1:3,25:29:41.63:625,42,0	1/1:4,14:21:47.54:614,48,0	1/1:7,13:20:33.11:511,33,0	1/1:7,13:23:26.84:428,27,0	1/1:3,9:14:26.58:389,27,0	1/1:2,0:20:1.45:76,1,0	1/1:5,0:22:7:95,7,0	1/1:2,6:9:17.51:246,18,0	1/1:17,0:17:23.49:174,23,0	1/1:1,10:13:29.59:437,30,0	1/1:8,0:8:14.91:109,15,0
chr10	36294814	.	A	AG	4110.51	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=14.953;DP=618;FS=4.996;HRun=2;HaplotypeScore=85.0599;InbreedingCoeff=0.9606;MQ=80.10;MQ0=0;MQRankSum=-1.463;QD=35.74;ReadPosRankSum=0.487;VQSLOD=4.0023;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,105,1302	0/0:6,0:6:18.06:0,18,223	0/0:14,0:14:36.03:0,36,426	0/0:18,0:18:41.12:0,41,427	1/1:2,12:14:27.09:388,27,0	0/0:21,0:21:63.19:0,63,773	0/0:38,0:38:99:0,111,1350	0/0:32,0:32:90.28:0,90,1105	1/1:3,16:19:48.16:683,48,0	0/0:21,0:21:63.19:0,63,771	0/0:15,0:15:45.14:0,45,557	0/0:18,0:18:51.16:0,51,632	0/0:26,0:26:69.19:0,69,839	0/0:20,0:20:57.16:0,57,693	0/0:31,0:31:90.28:0,90,1115	1/1:1,14:15:39.13:562,39,0	1/1:3,23:26:69.23:986,69,0	0/0:30,0:30:84.23:0,84,1023	0/0:14,0:14:42.13:0,42,520	0/0:24,0:24:72.21:0,72,879	0/0:35,0:35:99:0,99,1214	0/0:17,0:17:51.16:0,51,631	0/0:11,0:11:30.09:0,30,372	0/0:34,0:34:90.28:0,90,1114	0/0:17,0:17:51.15:0,51,620	1/1:2,20:22:2.78:800,3,0	0/0:24,0:24:63.20:0,63,781	1/1:1,18:19:48.16:691,48,0
chr10	36294960	.	A	AG	25157.58	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-8.649;DP=665;FS=0.000;HRun=1;HaplotypeScore=55.9535;InbreedingCoeff=0.9991;MQ=91.42;MQ0=0;MQRankSum=-11.272;QD=41.11;ReadPosRankSum=6.000;VQSLOD=4.6003;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,46:47:99:1843,123,0	1/1:0,10:10:30.10:450,30,0	0/0:29,0:29:74.67:0,75,944	0/0:24,0:24:63.20:0,63,815	1/1:0,17:17:51.17:764,51,0	1/1:0,22:22:57.19:854,57,0	1/1:1,32:33:84.28:1259,84,0	1/1:2,27:28:84.27:1232,84,0	1/1:1,15:16:39.13:584,39,0	1/1:1,21:22:63.21:931,63,0	1/1:0,17:17:51.17:764,51,0	1/1:0,24:24:63.21:944,63,0	1/1:1,25:26:66.22:989,66,0	1/1:0,13:13:36.12:539,36,0	1/1:0,30:30:81.27:1214,81,0	1/1:1,16:17:48.16:712,48,0	1/1:1,29:30:81.27:1214,81,0	1/1:0,25:25:72.24:1079,72,0	1/1:1,14:15:45.09:627,45,0	1/1:0,28:28:81.27:1211,81,0	1/1:0,36:36:99:1574,105,0	1/1:0,26:26:72.24:1078,72,0	1/1:0,25:26:69.23:1022,69,0	1/1:0,24:24:66.22:989,66,0	1/1:0,16:16:48.16:719,48,0	1/1:0,26:26:78.26:1169,78,0	1/1:1,24:25:66.22:989,66,0	1/1:0,12:12:27.09:405,27,0
chr10	36295480	.	TG	T	3233.06	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=14.369;DP=645;FS=0.781;HRun=7;HaplotypeScore=71.5528;InbreedingCoeff=0.9829;MQ=85.59;MQ0=0;MQRankSum=-0.891;QD=25.26;ReadPosRankSum=3.438;VQSLOD=4.3129;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:59,0:59:99:0,153,1908	0/0:13,0:13:39.12:0,39,490	0/0:21,0:20:50.97:0,51,601	0/0:21,0:21:34.14:0,34,517	1/1:5,26:31:81.17:824,81,0	0/0:31,0:31:87.26:0,87,1078	0/0:22,0:22:63.20:0,63,790	0/0:34,0:34:72.19:0,72,865	1/1:3,12:15:36.08:367,36,0	0/0:26,0:26:69.21:0,69,858	0/0:12,0:12:30.10:0,30,377	0/0:21,0:21:54.17:0,54,668	0/0:13,0:13:39.12:0,39,488	0/0:24,0:24:66.20:0,66,815	0/0:23,0:23:66.17:0,66,791	1/1:1,24:25:72.16:735,72,0	1/1:1,27:28:78.18:796,78,0	0/0:20,0:20:57.18:0,57,717	0/0:21,0:21:51.15:0,51,628	0/0:16,0:16:45.13:0,45,552	0/0:40,0:40:99:0,108,1346	0/0:17,0:17:45.12:0,45,540	0/0:19,0:19:54.17:0,54,679	0/0:25,0:24:72.18:0,72,875	0/0:10,0:10:27.09:0,27,339	1/1:3,14:17:7.36:391,7,0	0/0:28,1:29:47.70:0,48,912	1/1:1,11:12:30.07:306,30,0
chr10	36297551	.	CA	C	20437.85	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=9.529;DP=736;FS=3.153;HRun=1;HaplotypeScore=77.3307;InbreedingCoeff=0.9947;MQ=82.10;MQ0=0;MQRankSum=-4.540;QD=37.57;ReadPosRankSum=2.185;VQSLOD=5.5199;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,49:49:99:1594,114,0	1/1:0,10:10:30.10:419,30,0	0/0:18,0:18:54.18:0,54,858	0/0:22,0:22:55.72:0,56,880	0/0:19,0:19:48.16:0,48,766	1/1:0,22:22:60.20:839,60,0	1/1:0,23:23:63.21:881,63,0	1/1:0,35:35:99:1410,102,0	0/0:34,0:34:99:0,102,1601	1/1:0,29:29:87.28:1193,87,0	1/1:1,14:15:39.12:527,39,0	1/1:0,21:21:60.20:836,60,0	1/1:0,32:32:93.31:1300,93,0	1/1:0,19:19:54.18:755,54,0	1/1:0,32:32:90.30:1259,90,0	0/0:37,0:37:99:0,108,1701	0/0:24,0:23:69.22:0,69,1075	1/1:0,20:20:57.19:797,57,0	1/1:0,23:23:69.23:962,69,0	1/1:0,25:25:69.23:963,69,0	1/1:0,44:44:99:1636,117,0	1/1:0,21:20:36.12:503,36,0	1/1:0,21:21:54.18:754,54,0	1/1:0,45:45:99:1762,126,0	1/1:0,23:22:60.20:839,60,0	0/0:34,0:34:99:0,102,1630	1/1:1,34:35:87.29:1207,87,0	0/0:4,0:4:12.04:0,12,192
chr10	36297797	.	AGCGC	A	10809.27	PASS	AB=1.000;AC=51;AF=0.911;AN=56;BaseQRankSum=-5.660;DP=435;FS=5.634;HRun=0;HaplotypeScore=102.2639;InbreedingCoeff=0.6663;MQ=74.88;MQ0=25;MQRankSum=-1.768;QD=28.75;ReadPosRankSum=3.388;VQSLOD=4.1054;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:13,1:12:24.08:372,24,0	1/1:10,0:10:11.98:132,12,0	0/0:22,0:11:20.37:0,20,207	0/0:36,0:19:12.35:0,12,197	1/1:14,0:13:30.09:425,30,0	1/1:13,1:14:35.98:485,36,0	1/1:14,0:14:30.03:430,30,0	1/1:21,0:19:48.16:823,48,0	1/1:12,0:12:0.71:123,1,0	1/1:16,0:16:45.15:733,45,0	1/1:14,0:12:21.05:272,21,0	1/1:9,0:6:12.03:148,12,0	1/1:20,0:19:50.82:615,51,0	1/1:11,1:12:18.06:273,18,0	1/1:10,0:10:20.98:271,21,0	1/1:17,0:17:3.60:362,4,0	1/1:13,0:12:20.38:425,20,0	1/1:9,0:8:18.06:294,18,0	1/1:11,0:10:30.09:438,30,0	1/1:21,0:20:48.10:669,48,0	1/1:15,0:13:14.91:233,15,0	1/1:14,2:16:33.07:486,33,0	1/1:19,0:19:45.07:643,45,0	1/1:14,0:14:20.58:282,21,0	1/1:18,2:21:45.14:672,45,0	0/1:13,0:13:0.81:321,0,1	1/1:15,0:15:39.08:551,39,0	1/1:12,0:9:11.24:331,11,0
chr10	36297800	.	GCGCGCTCT	G	12301.43	PASS	AB=1.000;AC=48;AF=0.857;AN=56;BaseQRankSum=-6.265;DP=417;FS=5.651;HRun=0;HaplotypeScore=115.0622;InbreedingCoeff=0.3781;MQ=69.73;MQ0=35;MQRankSum=-1.680;QD=33.89;ReadPosRankSum=2.636;VQSLOD=4.4272;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:12:23.88:372,24,0	1/1:1,8:9:12.04:267,12,0	0/0:20,0:9:20.37:0,20,207	0/0:34,0:16:13.20:0,13,198	1/1:13,0:12:30.09:425,30,0	1/1:12,1:13:36.12:587,36,0	1/1:12,2:13:30.10:516,30,0	1/1:20,0:18:48.16:823,48,0	0/1:12,0:12:52.59:106,0,53	1/1:15,0:15:45.15:759,45,0	1/1:11,1:10:21.05:292,21,0	1/1:9,0:6:12.04:235,12,0	1/1:16,2:18:51.01:845,51,0	1/1:10,1:11:18.06:317,18,0	1/1:6,2:10:21.07:365,21,0	0/1:18,0:17:89.55:355,0,90	1/1:13,0:11:8.68:391,9,0	1/1:10,0:8:18.06:352,18,0	1/1:12,0:10:30.10:484,30,0	1/1:20,0:20:48.16:786,48,0	1/1:11,0:9:14.87:232,15,0	1/1:13,3:15:32.91:553,33,0	1/1:16,0:18:45.08:741,45,0	1/1:16,0:13:20.65:352,21,0	1/1:14,4:18:45.15:812,45,0	0/1:12,0:11:99:295,0,156	1/1:11,2:14:39.13:759,39,0	0/1:13,0:9:43.26:280,0,43
chr10	36297847	.	C	CTCTCTT	1810.19	PASS	AB=1.000;AC=25;AF=0.446;AN=56;BaseQRankSum=-2.652;DP=486;FS=18.463;HRun=0;HaplotypeScore=188.4736;InbreedingCoeff=0.5841;MQ=37.81;MQ0=33;MQRankSum=2.923;QD=7.77;ReadPosRankSum=-1.278;VQSLOD=1.4843;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:10:1.36:4,1,0	0/0:6,0:6:8.95:0,9,96	0/0:24,0:7:11.42:0,11,80	0/0:46,0:7:5.35:0,5,30	1/1:20,0:18:29.18:176,29,0	0/0:19,0:18:3.74:0,4,42	0/0:10,0:9:5.07:0,5,22	0/0:24,0:17:43.88:0,44,285	1/1:3,14:23:14.99:268,15,0	0/0:17,0:15:38:0,38,241	0/1:15,0:13:0.42:0,0,11	0/0:17,0:15:5.63:0,6,47	0/0:15,0:15:26.45:0,26,212	0/1:13,0:13:3.05:9,0,3	0/0:19,0:19:6.64:0,7,61	1/1:4,14:23:10.94:523,11,0	1/1:12,0:12:11.11:133,11,0	0/0:9,0:7:11.54:0,12,116	0/0:8,0:5:12.34:0,12,82	0/1:19,0:18:14.98:28,0,15	1/1:11,0:9:2.49:6,2,0	1/1:19,0:17:0.23:2,0,0	1/1:13,0:12:4.22:12,4,0	1/1:15,0:13:0.41:2,0,0	0/0:16,0:15:4.20:0,4,36	1/1:4,0:21:39.95:536,40,0	0/0:21,0:20:31.36:0,31,302	1/1:12,0:11:32.91:286,33,0
chr10	36297852	.	TC	T	1635.98	PASS	AB=0.787;AC=26;AF=0.464;AN=56;BaseQRankSum=8.120;DP=489;FS=3.749;HRun=2;HaplotypeScore=174.3675;InbreedingCoeff=-0.2881;MQ=43.85;MQ0=33;MQRankSum=-2.142;QD=4.81;ReadPosRankSum=1.777;VQSLOD=0.7579;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:10,3:10:0:0,0,0	0/1:3,2:5:16.86:59,0,17	0/0:33,0:10:24.78:0,25,276	0/0:56,0:12:13.85:0,14,106	0/1:19,2:19:19.34:19,0,169	0/1:7,12:18:6.76:96,0,7	0/1:9,2:10:28.55:29,0,42	0/1:20,3:17:39.81:40,0,440	0/1:20,0:20:16.69:17,0,117	0/1:8,8:14:99:190,0,199	1/1:6,8:12:3.48:40,3,0	0/1:8,8:15:62.28:96,0,62	0/1:6,8:14:65:232,0,65	0/1:11,1:12:29.70:30,0,31	1/1:10,9:19:12.17:182,12,0	0/1:19,0:19:49.75:50,0,139	0/1:12,1:12:23.04:23,0,139	0/1:7,2:7:27.23:98,0,27	0/1:6,4:6:22.45:134,0,22	1/1:5,15:19:6.44:104,6,0	0/0:7,2:8:0.73:0,1,2	0/1:11,8:17:0.54:1,0,1	1/1:7,5:11:0.94:2,1,0	0/0:10,5:13:0:0,0,0	0/1:7,8:14:11.64:67,0,12	0/0:21,0:20:56.46:0,56,734	0/1:10,10:19:99:279,0,141	0/0:13,0:11:33.08:0,33,447
chr10	36297853	.	C	CT	1830.29	PASS	AB=0.923;AC=26;AF=0.464;AN=56;BaseQRankSum=8.248;DP=500;FS=5.704;HRun=1;HaplotypeScore=182.9881;InbreedingCoeff=-0.2958;MQ=43.63;MQ0=31;MQRankSum=-3.611;QD=5.03;ReadPosRankSum=1.696;VQSLOD=0.5746;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:11,0:8:0:0,0,0	0/1:6,0:6:16.85:58,0,17	0/0:33,0:10:24.80:0,25,267	0/0:58,0:12:12.93:0,13,111	0/1:21,0:19:20.15:20,0,151	0/1:18,0:18:6.73:92,0,7	0/1:9,4:13:37.33:63,0,37	0/1:25,3:22:99:100,0,429	0/1:20,0:20:16.74:17,0,100	0/1:18,0:16:99:191,0,181	1/1:13,1:12:2.56:38,3,0	0/1:13,2:15:62.19:99,0,62	0/1:13,0:14:45.44:251,0,45	0/1:14,0:14:30.81:40,0,31	1/1:17,2:20:18.32:192,18,0	0/1:19,0:19:66.81:67,0,111	0/1:12,0:12:23.83:24,0,124	0/1:5,1:5:24.46:107,0,24	0/1:10,1:7:22.04:154,0,22	1/1:19,2:20:5.80:114,6,0	0/0:10,0:9:0.24:0,0,1	0/1:18,2:19:0.43:0,0,1	0/1:10,1:11:0.26:0,0,0	0/1:9,5:13:0.08:1,0,0	0/1:15,0:14:12.04:67,0,12	0/0:21,0:20:48.57:0,49,581	0/1:16,2:18:99:282,0,132	0/0:13,0:11:31.34:0,31,387
chr10	36297871	.	T	TCTCTCTCACACACACACA	12300.74	PASS	AB=0.970;AC=37;AF=0.661;AN=56;BaseQRankSum=-7.432;DP=587;FS=6.685;HRun=0;HaplotypeScore=276.1825;InbreedingCoeff=0.5189;MQ=45.12;MQ0=25;MQRankSum=-5.230;QD=34.46;ReadPosRankSum=2.341;VQSLOD=3.0778;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:16,0:12:0:1,0,0	1/1:5,0:5:6.02:216,6,0	0/0:59,0:15:19.57:0,20,431	0/0:78,0:18:38.82:0,39,613	0/0:19,0:19:17.15:0,17,614	1/1:17,0:16:9.02:398,9,0	1/1:16,0:15:17.04:655,17,0	1/1:23,0:17:39.13:1288,39,0	0/1:20,0:21:15.77:16,0,482	1/1:23,0:21:57.20:2270,57,0	1/1:14,0:13:3.15:190,3,0	1/1:18,0:15:7.38:421,7,0	1/1:19,0:19:33.54:1368,34,0	1/1:5,9:21:2.40:176,2,0	1/1:22,0:22:15.73:889,16,0	0/0:19,0:20:26.26:0,26,865	0/0:15,0:15:9.03:0,9,296	1/1:8,0:8:18.02:876,18,0	1/1:14,0:11:33.08:1126,33,0	1/1:25,0:24:8.09:411,8,0	1/1:6,0:5:0.88:2,1,0	0/0:26,0:25:3.75:0,4,15	0/0:12,0:12:1.81:0,2,5	0/1:14,0:17:0:2,0,0	1/1:17,0:16:5.36:333,5,0	0/1:19,0:20:99:156,0,1182	1/1:23,0:22:45.63:1502,46,0	0/1:10,0:11:7.41:7,0,1040
chr10	36297911	.	C	CAGACAGAG	4340.44	PASS	AB=0.952;AC=42;AF=0.750;AN=56;BaseQRankSum=-5.207;DP=584;FS=20.403;HRun=0;HaplotypeScore=243.5055;InbreedingCoeff=0.0316;MQ=50.02;MQ0=11;MQRankSum=1.309;QD=8.43;ReadPosRankSum=1.921;VQSLOD=2.1457;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:11:11.88:0,12,100	0/1:9,0:9:15.35:15,0,65	0/1:43,0:11:14.04:14,0,145	0/0:54,0:20:19.28:0,19,142	0/1:2,11:22:0.04:0,0,0	1/1:12,0:12:10.90:101,11,0	1/1:22,0:21:16.63:106,17,0	1/1:22,0:21:56.86:516,57,0	1/1:22,0:22:22.15:214,22,0	0/1:30,0:30:61.47:464,0,61	1/1:16,0:16:9.49:60,9,0	1/1:25,0:23:16.67:173,17,0	0/1:25,0:25:99:234,0,192	1/1:21,0:21:14.59:135,15,0	0/1:17,0:17:13.56:49,0,14	1/1:20,0:20:32.76:427,33,0	1/1:20,0:19:1.21:28,1,0	0/1:11,0:11:55.33:68,0,55	1/1:18,0:17:14.47:275,14,0	0/1:21,0:21:45.42:111,0,45	1/1:12,0:11:9:146,9,0	1/1:21,0:21:15.34:118,15,0	0/1:17,0:17:12.89:33,0,13	1/1:16,0:17:2.86:58,3,0	1/1:17,0:17:0.53:10,1,0	1/1:21,0:21:54.30:424,54,0	0/1:21,0:21:99:190,0,121	1/1:13,0:13:21.02:372,21,0
chr10	36297913	.	G	GAC	4023.63	PASS	AB=0.930;AC=46;AF=0.821;AN=56;BaseQRankSum=-0.376;DP=584;FS=1.353;HRun=0;HaplotypeScore=204.7987;InbreedingCoeff=0.1901;MQ=50.01;MQ0=12;MQRankSum=1.734;QD=7.80;ReadPosRankSum=5.193;VQSLOD=3.4014;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:11:11.88:0,12,100	1/1:9,0:9:7.96:50,8,0	0/1:43,0:11:14.04:14,0,145	0/0:53,0:20:22.65:0,23,160	1/1:21,0:21:2.63:12,3,0	1/1:12,0:12:11.90:99,12,0	1/1:21,0:20:17.73:123,18,0	1/1:23,0:22:56.51:455,57,0	1/1:23,0:23:23.78:173,24,0	1/1:30,0:30:33.98:464,34,0	1/1:16,0:16:8.96:115,9,0	1/1:25,1:24:17.79:156,18,0	1/1:25,0:25:32.78:273,33,0	1/1:20,0:20:14.56:102,15,0	1/1:16,0:16:10.48:75,10,0	1/1:21,0:21:23.98:220,24,0	0/1:9,11:19:37.04:44,0,37	1/1:11,0:11:5.05:59,5,0	1/1:19,0:18:33.57:303,34,0	0/1:21,0:21:23.44:110,0,23	1/1:12,0:11:8.94:121,9,0	1/1:22,0:22:14.70:171,15,0	0/1:17,0:17:12.17:12,0,34	1/1:15,2:17:3:58,3,0	1/1:16,0:16:4.49:72,4,0	0/1:21,0:21:4.87:294,0,5	1/1:20,0:20:30.02:199,30,0	0/1:13,1:14:11.14:249,0,11
chr10	36297931	.	GAGAGAGAGAGAA	G	4827.42	PASS	AB=0.995;AC=41;AF=0.732;AN=56;BaseQRankSum=-4.860;DP=557;FS=15.285;HRun=0;HaplotypeScore=216.8488;InbreedingCoeff=-0.1230;MQ=47.61;MQ0=14;MQRankSum=-0.628;QD=9.01;ReadPosRankSum=-0.621;VQSLOD=2.5658;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:17,0:14:26.96:27,0,212	1/1:11,1:12:11.15:220,11,0	0/1:30,0:5:8.84:9,0,18	0/1:55,0:14:1.83:2,0,102	0/1:26,0:26:13.35:71,0,13	1/1:8,1:9:3.82:39,4,0	1/1:19,0:18:5.69:95,6,0	0/1:17,0:16:15.30:71,0,15	0/1:25,0:25:18.93:19,0,422	1/1:30,2:32:58.79:873,59,0	1/1:20,0:20:17.13:262,17,0	0/1:24,0:22:11.71:12,0,143	1/1:21,2:23:49.03:805,49,0	1/1:21,0:21:14.10:195,14,0	1/1:16,0:16:10.13:193,10,0	0/0:21,0:21:7.46:0,7,479	0/1:20,0:19:38.90:39,0,90	1/1:12,0:12:7.23:118,7,0	1/1:11,0:9:15.02:135,15,0	0/1:17,1:18:3.72:330,0,4	1/1:13,0:13:14.94:118,15,0	1/1:17,1:18:22.02:273,22,0	0/1:18,0:18:27.69:28,0,63	0/1:13,0:13:17.02:17,0,122	1/1:17,1:18:29.29:333,29,0	0/1:17,0:17:7.21:7,0,639	1/1:20,1:21:28.76:523,29,0	0/1:10,0:10:17.16:17,0,535
chr10	36297933	.	GAGAGAGAGAA	G	7208.56	PASS	AB=1.000;AC=44;AF=0.786;AN=56;BaseQRankSum=-7.060;DP=561;FS=7.476;HRun=0;HaplotypeScore=197.7684;InbreedingCoeff=-0.1814;MQ=47.95;MQ0=15;MQRankSum=0.863;QD=12.85;ReadPosRankSum=-0.034;VQSLOD=3.0833;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:17,0:14:48.39:48,0,132	1/1:3,10:13:10.94:265,11,0	0/1:29,0:6:6.83:7,0,21	0/1:54,0:12:1.29:1,0,78	0/1:28,0:28:8.53:113,0,9	1/1:8,1:9:5.94:101,6,0	1/1:4,15:18:5.84:212,6,0	1/1:17,0:16:21.28:148,21,0	0/1:25,0:25:39.51:40,0,265	1/1:27,4:31:74.91:1078,75,0	1/1:14,5:19:30.83:496,31,0	0/1:24,0:22:11.62:12,0,97	1/1:17,6:23:53.61:1069,54,0	1/1:20,1:21:22.51:218,23,0	1/1:15,2:17:10.30:305,10,0	0/1:22,0:22:42.07:42,0,288	0/1:21,0:20:27.82:63,0,28	1/1:5,7:12:8.05:194,8,0	1/1:10,1:9:15.57:213,16,0	1/1:18,2:20:9.33:430,9,0	1/1:13,0:13:14.94:118,15,0	1/1:13,5:18:30.38:535,30,0	0/1:18,0:18:30.21:30,0,35	0/1:13,0:13:16.61:17,0,96	1/1:17,2:19:29.16:494,29,0	0/1:17,0:17:37.48:37,0,472	1/1:16,5:21:46.49:894,46,0	0/1:10,0:10:27.63:28,0,377
chr10	36297941	.	GAA	G	5717.44	PASS	AB=0.995;AC=52;AF=0.929;AN=56;BaseQRankSum=-6.158;DP=533;FS=0.000;HRun=3;HaplotypeScore=152.5781;InbreedingCoeff=0.0878;MQ=59.43;MQ0=11;MQRankSum=1.790;QD=10.73;ReadPosRankSum=4.688;VQSLOD=1.5124;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:15:20.70:165,21,0	1/1:13,0:13:11.31:97,11,0	0/1:26,0:13:2.17:2,0,72	0/1:44,0:13:13.03:13,0,81	1/1:30,0:30:24.13:243,24,0	1/1:8,0:8:10.71:115,11,0	1/1:16,0:15:8.96:106,9,0	1/1:15,0:14:26.78:195,27,0	1/1:22,0:22:31.05:247,31,0	1/1:29,0:29:66.20:611,66,0	1/1:17,0:17:35.84:364,36,0	1/1:24,0:22:11.24:93,11,0	1/1:19,3:22:54.77:441,55,0	1/1:18,0:18:27.19:228,27,0	1/1:15,1:16:13.79:195,14,0	1/1:21,0:21:24.47:208,24,0	1/1:23,0:22:21.97:146,22,0	1/1:10,0:10:7.17:42,7,0	1/1:9,1:9:17.75:145,18,0	1/1:20,1:21:36.93:300,37,0	1/1:13,0:13:17.93:143,18,0	1/1:21,0:21:37.83:370,38,0	0/1:14,0:14:7.88:51,0,8	1/1:14,0:14:7.34:51,7,0	1/1:16,1:17:30.86:317,31,0	0/1:17,0:17:15.33:224,0,15	1/1:23,0:23:54.27:403,54,0	1/1:11,0:11:19.12:205,19,0
chr10	36298193	.	AC	A	4215.73	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=10.966;DP=579;FS=10.750;HRun=1;HaplotypeScore=60.4518;InbreedingCoeff=0.9976;MQ=76.89;MQ0=0;MQRankSum=-0.755;QD=34.00;ReadPosRankSum=3.427;VQSLOD=3.8254;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:75.18:0,75,1026	0/0:12,0:12:33.07:0,33,432	0/0:12,0:12:26.10:0,26,306	0/0:14,1:15:18.93:0,19,287	1/1:0,25:25:69.02:848,69,0	0/0:25,0:25:75.22:0,75,1030	0/0:15,0:15:45.14:0,45,620	0/0:26,0:26:75.12:0,75,952	1/1:0,16:16:36.12:502,36,0	0/0:30,0:30:66.75:0,67,1112	0/0:16,0:16:48.11:0,48,623	0/0:19,0:19:54.13:0,54,727	0/0:23,0:23:69.21:0,69,951	0/0:30,0:30:87.21:0,87,1146	0/0:27,0:27:81.18:0,81,1046	1/1:0,20:20:41.88:585,42,0	1/1:1,30:31:85.33:1245,85,0	0/0:30,0:30:84.06:0,84,1051	0/0:17,0:17:51.14:0,51,664	0/0:18,0:18:48.14:0,48,659	0/0:14,0:14:42.11:0,42,562	0/0:19,0:19:45.14:0,45,638	0/0:12,0:12:24.06:0,24,322	0/0:14,0:14:39.07:0,39,515	0/0:25,0:25:72.07:0,72,925	1/1:0,16:16:45.15:624,45,0	0/0:30,0:30:90.24:0,90,1226	1/1:1,15:16:25.94:412,26,0
chr10	36298336	.	TTTC	T	4757.74	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=11.154;DP=682;FS=4.806;HRun=0;HaplotypeScore=134.2803;InbreedingCoeff=0.9999;MQ=88.07;MQ0=0;MQRankSum=-3.742;QD=37.17;ReadPosRankSum=4.308;VQSLOD=5.4654;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,105,2201	0/0:12,0:12:30.10:0,30,646	0/0:32,0:32:81.24:0,81,1648	0/0:26,0:26:56.93:0,57,1142	1/1:4,16:20:39.13:606,39,0	0/0:20,0:20:51.16:0,51,1043	0/0:29,0:29:87.28:0,87,1817	0/0:32,0:32:81.27:0,81,1679	1/1:1,21:22:51.17:792,51,0	0/0:26,0:26:69.23:0,69,1440	0/0:22,0:22:54.18:0,54,1117	0/0:19,0:19:54.19:0,54,1150	0/0:22,0:22:66.23:0,66,1417	0/0:21,0:21:57.20:0,57,1228	0/0:23,0:23:63.20:0,63,1317	1/1:2,16:18:45.15:690,45,0	1/1:4,23:27:63.21:978,63,0	0/0:22,0:22:57.20:0,57,1222	0/0:24,0:24:57.17:0,57,1149	0/0:33,0:33:87.30:0,87,1829	0/0:31,0:31:84.29:0,84,1804	0/0:26,0:26:72.24:0,72,1499	0/0:19,0:19:51.16:0,51,1033	0/0:32,0:32:84.25:0,84,1695	0/0:15,0:15:45.15:0,45,968	1/1:2,19:21:57.18:853,57,0	0/0:28,0:28:78.27:0,78,1676	1/1:2,18:20:54.18:838,54,0
chr10	36298744	.	CTTTTG	C	6036.41	PASS	AC=32;AF=0.615;AN=52;BaseQRankSum=0.506;DP=704;FS=2.156;HRun=0;HaplotypeScore=141.1467;InbreedingCoeff=0.9069;MQ=72.03;MQ0=5;MQRankSum=-1.220;QD=16.54;ReadPosRankSum=-0.209;VQSLOD=4.6076;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:29:21.50:0,21,318	1/1:6,5:11:8.86:141,9,0	./.	./.	0/0:19,0:42:63.20:0,63,1189	1/1:7,8:16:21.05:342,21,0	1/1:11,16:27:27.03:394,27,0	1/1:30,0:30:3:25,3,0	0/0:14,0:25:27.08:0,27,546	1/1:19,14:33:42.14:722,42,0	1/1:8,7:15:15.05:266,15,0	0/0:25,0:25:42.14:0,42,1071	1/1:9,9:18:24.08:425,24,0	1/1:9,12:21:18.06:319,18,0	1/1:12,14:26:27.09:478,27,0	0/0:12,0:25:15.52:0,16,329	0/0:19,0:32:30.09:0,30,616	1/1:13,7:20:12:199,12,0	1/1:17,5:22:15.05:266,15,0	1/1:12,14:26:27.09:460,27,0	1/1:15,13:29:27.09:478,27,0	1/1:9,11:20:30.10:531,30,0	0/0:26,0:26:39.11:0,39,947	0/0:40,0:40:73.48:0,73,1907	1/1:10,9:19:21.07:372,21,0	0/0:16,1:31:1.07:0,1,965	1/1:12,20:32:37.01:620,37,0	0/0:1,0:4:12.04:0,12,279
chr10	36299055	.	T	TTCAG	10612.44	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-2.431;DP=686;FS=0.722;HRun=0;HaplotypeScore=123.1712;InbreedingCoeff=0.9864;MQ=84.83;MQ0=0;MQRankSum=-6.480;QD=65.11;ReadPosRankSum=3.629;VQSLOD=7.1648;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:58:99:0,163,3009	0/0:4,0:4:9:0,9,138	0/0:28,0:28:66.20:0,66,1145	0/0:30,0:29:48.66:0,49,902	1/1:6,24:30:57.20:1482,57,0	0/0:21,0:21:63.22:0,63,1221	0/0:25,0:25:66.19:0,66,1192	0/0:34,0:34:96.32:0,96,1791	1/1:4,17:24:66.23:1751,66,0	0/0:28,0:28:75.25:0,75,1389	0/0:9,0:9:21.07:0,21,407	0/0:14,0:14:42.14:0,42,814	0/0:27,0:27:78.27:0,78,1491	0/0:25,0:25:75.26:0,75,1426	0/0:20,0:20:57.18:0,57,1072	1/1:3,27:32:81.28:2163,81,0	1/1:3,37:40:96.33:2625,96,0	0/0:29,0:29:87.30:0,87,1648	0/0:20,0:20:60.20:0,60,1129	0/0:18,0:18:48.16:0,48,901	0/0:27,0:27:81.17:0,81,1432	0/0:14,0:14:39.13:0,39,756	0/0:9,0:9:27.08:0,27,490	0/0:37,0:37:99:0,111,2061	0/0:23,0:23:69.19:0,69,1299	1/1:5,21:29:87.21:2029,87,0	0/0:23,0:23:66.21:0,66,1224	1/1:1,7:8:21.07:564,21,0
chr10	36299474	.	C	CGTGT	5308.52	PASS	AB=0.774;AC=48;AF=0.889;AN=54;BaseQRankSum=0.933;DP=624;FS=10.103;HRun=0;HaplotypeScore=194.1989;InbreedingCoeff=0.3488;MQ=56.85;MQ0=6;MQRankSum=-0.755;QD=9.38;ReadPosRankSum=1.907;VQSLOD=3.4275;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:32,0:31:5.81:109,6,0	1/1:3,0:4:3.01:52,3,0	0/0:23,0:12:5.99:0,6,70	0/0:22,0:17:8.88:0,9,63	1/1:5,6:13:14.79:300,15,0	1/1:19,0:21:2.90:52,3,0	1/1:29,0:28:8.78:131,9,0	1/1:27,0:26:26.26:287,26,0	1/1:7,13:21:23.82:468,24,0	1/1:27,0:26:44.91:588,45,0	1/1:11,0:11:6.02:101,6,0	0/1:27,0:30:0.03:0,0,0	1/1:20,0:24:8.80:137,9,0	1/1:19,0:21:3.01:52,3,0	1/1:17,0:16:6:54,6,0	1/1:7,8:15:15.05:359,15,0	0/1:17,13:39:51.58:535,0,52	1/1:17,0:17:18.02:297,18,0	1/1:27,0:25:16.03:198,16,0	1/1:9,0:11:9.50:144,10,0	1/1:35,0:34:15.03:226,15,0	1/1:13,0:13:2.90:44,3,0	1/1:18,0:23:3.01:67,3,0	1/1:27,0:31:2.61:38,3,0	1/1:19,0:19:15.04:223,15,0	1/1:12,7:22:41.15:574,41,0	1/1:32,0:32:18.04:272,18,0	./.
chr10	36300585	.	TA	T	18261.43	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=8.716;DP=657;FS=5.581;HRun=1;HaplotypeScore=69.9152;InbreedingCoeff=0.9896;MQ=83.70;MQ0=0;MQRankSum=-4.541;QD=38.20;ReadPosRankSum=5.446;VQSLOD=5.2780;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,41:41:99:1510,108,0	1/1:0,4:4:9.03:126,9,0	0/0:29,0:30:78.49:0,78,1147	0/0:25,0:25:60.45:0,60,923	0/0:29,0:29:83.98:0,84,1340	1/1:0,24:24:60.20:839,60,0	1/1:0,29:29:75.25:1049,75,0	1/1:0,24:24:72.23:991,72,0	0/0:21,0:21:63.21:0,63,1007	1/1:0,25:25:75.24:1034,75,0	1/1:0,22:22:63.17:859,63,0	1/1:0,21:21:60.20:839,60,0	1/1:0,22:22:60.20:839,60,0	1/1:1,23:24:60.67:840,61,0	1/1:0,22:22:66.22:923,66,0	0/0:21,0:21:63.20:0,63,980	0/0:20,0:20:60.20:0,60,954	1/1:0,11:11:33.11:462,33,0	1/1:0,17:17:51.17:713,51,0	1/1:0,23:23:63.21:881,63,0	1/1:0,31:31:78.26:1091,78,0	1/1:0,26:26:69.19:942,69,0	1/1:0,20:20:57.19:797,57,0	1/1:0,27:27:72.24:1007,72,0	1/1:0,35:35:99:1427,102,0	0/0:25,1:26:36.30:0,36,1157	1/1:0,30:30:78.23:1091,78,0	0/0:7,0:7:21.07:0,21,335
chr10	36301027	.	A	AT	14339.24	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-15.925;DP=613;FS=0.358;HRun=6;HaplotypeScore=71.3808;InbreedingCoeff=0.9932;MQ=85.35;MQ0=0;MQRankSum=-2.326;QD=32.44;ReadPosRankSum=1.513;VQSLOD=5.0093;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,33:34:96.31:1208,96,0	1/1:0,9:9:27.09:339,27,0	0/0:19,0:19:35.43:0,35,315	0/0:27,0:27:13.35:0,13,362	0/0:19,0:19:51.10:0,51,514	1/1:1,20:21:54.17:679,54,0	1/1:3,26:29:63.20:793,63,0	1/1:5,26:31:69.15:833,69,0	0/0:21,0:21:60.14:0,60,612	1/1:0,23:23:69.22:868,69,0	1/1:0,16:16:45.14:566,45,0	1/1:1,23:24:57.18:717,57,0	1/1:3,18:21:57.18:715,57,0	1/1:0,13:13:33.11:415,33,0	1/1:4,23:28:66.21:822,66,0	0/0:30,0:30:84.19:0,84,857	0/0:21,0:21:57.10:0,57,567	1/1:1,17:18:48.15:604,48,0	1/1:0,14:13:39.11:479,39,0	1/1:2,16:18:48.15:604,48,0	1/1:1,19:20:48.12:587,48,0	1/1:0,19:19:54.17:679,54,0	1/1:1,22:23:60.19:755,60,0	1/1:3,27:30:72.23:905,72,0	1/1:1,24:25:69.22:868,69,0	0/0:28,1:29:40.40:0,40,710	1/1:1,25:26:72.23:904,72,0	0/0:5,0:5:15.03:0,15,153
chr10	36303118	.	C	CTGTGTGTGTGTG	8692.71	PASS	AB=1.000;AC=48;AF=0.857;AN=56;BaseQRankSum=-1.845;DP=593;FS=5.149;HRun=0;HaplotypeScore=247.9226;InbreedingCoeff=0.3330;MQ=51.77;MQ0=9;MQRankSum=0.662;QD=15.89;ReadPosRankSum=1.616;VQSLOD=3.2296;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:31:9.97:198,10,0	1/1:7,0:6:0.47:1,0,0	0/0:25,0:15:2.84:0,3,14	0/1:18,0:13:6.07:6,0,38	0/0:20,1:20:1.08:0,1,1	0/1:22,0:22:0:0,0,0	1/1:34,0:34:15.92:346,16,0	1/1:23,0:22:22.63:640,23,0	1/1:24,0:24:11.16:459,11,0	1/1:20,0:19:25.64:919,26,0	1/1:16,0:15:5.99:49,6,0	1/1:23,0:22:3.01:122,3,0	1/1:21,0:20:9.03:420,9,0	1/1:22,0:21:8.81:244,9,0	1/1:24,0:23:18.03:433,18,0	1/1:11,3:14:6.02:349,6,0	1/1:21,7:29:20.10:680,20,0	0/1:21,0:21:12.02:721,0,12	1/1:25,0:24:15.30:617,15,0	1/1:15,0:15:0.65:2,1,0	1/1:25,0:24:12.43:122,12,0	1/1:21,0:21:3.52:25,4,0	1/1:17,0:15:3.45:21,3,0	1/1:20,0:20:0.47:1,0,0	0/1:17,0:15:0:0,0,0	1/1:30,3:33:48.73:1537,49,0	1/1:14,0:14:18.06:672,18,0	1/1:9,0:7:5.99:107,6,0
chr10	36304599	.	GATGGCCCC	G	7154.38	PASS	AB=0.519;AC=11;AF=0.196;AN=56;BaseQRankSum=8.791;DP=584;FS=1.965;HRun=0;HaplotypeScore=176.1732;InbreedingCoeff=0.8453;MQ=80.43;MQ0=0;MQRankSum=-13.325;QD=59.13;ReadPosRankSum=2.500;VQSLOD=4.4929;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,111,4709	0/0:11,0:11:30.10:0,30,1219	0/0:15,0:16:45.15:0,45,1835	0/0:17,0:17:45.05:0,45,1534	1/1:1,27:28:51.18:1272,51,0	0/0:21,0:21:63.22:0,63,2750	0/0:14,0:14:42.14:0,42,1717	0/0:29,0:29:72.23:0,72,2740	1/1:0,25:25:63.22:1807,63,0	0/0:22,0:22:66.23:0,66,2930	0/0:16,0:16:48.15:0,48,2029	0/0:18,0:18:51.18:0,51,2087	0/0:18,0:18:51.18:0,51,2095	0/0:20,0:20:60.21:0,60,2601	0/0:16,0:16:48.16:0,48,2064	1/1:1,12:13:30.10:861,30,0	1/1:3,24:27:39.09:1118,39,0	0/0:30,0:30:84.29:0,84,3741	0/0:26,0:26:78.27:0,78,3373	0/0:13,0:13:39.13:0,39,1740	0/0:36,0:36:99:0,102,3932	0/0:19,0:19:57.18:0,57,2353	0/0:19,0:19:54.19:0,54,2332	0/0:25,0:25:72.23:0,72,3009	0/0:18,0:18:54.17:0,54,2191	0/1:2,25:27:55.96:2011,0,56	0/0:21,0:19:60.17:0,60,2474	1/1:0,1:1:3.01:86,3,0
chr10	36305137	.	T	TGCA	923.90	PASS	AB=0.902;AC=22;AF=0.917;AN=24;BaseQRankSum=-2.448;DP=82;FS=11.236;HRun=0;HaplotypeScore=44.3387;InbreedingCoeff=-0.2292;MQ=136.29;MQ0=2;MQRankSum=0.075;QD=11.41;ReadPosRankSum=-1.657;VQSLOD=1.3641;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,0:6:5.99:50,6,0	./.	0/1:21,3:14:64.39:120,0,64	0/1:29,3:21:15.34:398,0,15	./.	1/1:2,0:2:5.99:49,6,0	./.	1/1:4,0:4:8.99:129,9,0	./.	./.	1/1:1,0:1:3.01:50,3,0	./.	./.	1/1:1,0:1:3:25,3,0	./.	./.	1/1:2,0:2:6.01:74,6,0	1/1:3,0:3:5.96:44,6,0	./.	./.	1/1:4,0:4:3:25,3,0	./.	./.	1/1:1,0:1:2.97:20,3,0	./.	1/1:1,0:1:3:27,3,0	./.	./.
chr10	36305216	.	G	GTA	1299	PASS	AB=0.964;AC=29;AF=0.580;AN=50;BaseQRankSum=5.830;DP=391;FS=0.000;HRun=0;HaplotypeScore=319.9788;InbreedingCoeff=0.1195;MQ=33.80;MQ0=2;MQRankSum=0.545;QD=4.01;ReadPosRankSum=2.166;VQSLOD=1.5298;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:2.92:0,3,17	./.	./.	0/0:5,0:3:5.98:0,6,52	1/1:31,7:38:9.41:123,9,0	0/1:12,0:12:1.25:1,0,8	0/1:9,0:9:0:0,0,1	0/0:23,0:22:50.84:0,51,336	1/1:12,3:14:17.35:187,17,0	0/1:25,0:24:38.58:39,0,117	0/0:13,0:13:2.39:0,2,13	0/1:13,0:13:2.33:2,0,9	0/1:17,0:17:30.57:53,0,31	0/1:9,0:9:0:0,0,0	0/1:14,0:14:0.35:29,0,0	1/1:8,3:11:12.64:125,13,0	0/1:1,8:9:14.46:119,0,14	0/1:7,0:7:17.33:17,0,46	0/1:9,0:8:22.19:22,0,80	1/1:25,0:25:4.25:48,4,0	./.	1/1:15,0:15:2.81:22,3,0	0/1:17,0:15:0.08:0,0,0	0/1:9,0:9:0.03:0,0,0	1/1:25,0:24:11.64:85,12,0	1/1:14,5:19:22.40:343,22,0	0/1:17,0:17:67.72:75,0,68	1/1:5,4:9:11.77:148,12,0
chr10	36305225	.	G	GTGT	205.89	PASS	AB=0.950;AC=26;AF=0.481;AN=54;BaseQRankSum=4.446;DP=353;FS=3.001;HRun=0;HaplotypeScore=267.3340;InbreedingCoeff=0.1542;MQ=41.38;MQ0=2;MQRankSum=-0.082;QD=0.80;ReadPosRankSum=4.373;VQSLOD=2.5029;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:5,2:7:0.88:0,1,2	0/1:7,0:5:0:0,0,0	1/1:5,0:2:2.97:20,3,0	0/0:8,0:5:7.66:0,8,91	0/1:34,0:34:0.93:17,0,1	0/1:11,0:11:9.70:16,0,10	1/1:6,0:6:2.13:5,2,0	0/0:18,0:17:37.57:0,38,224	0/1:15,0:14:15.59:16,0,41	0/1:23,0:22:49.35:49,0,166	0/1:13,0:13:0.43:1,0,0	0/1:9,3:12:12.21:34,0,12	0/1:15,0:16:7.63:8,0,44	0/1:9,0:9:0.01:0,0,0	0/0:13,0:13:0.24:0,0,2	0/0:11,0:11:6.18:0,6,30	1/1:8,0:8:3.63:15,4,0	0/0:6,0:6:4.59:0,5,58	0/0:8,0:7:20.07:0,20,105	1/1:21,0:21:3.80:37,4,0	./.	0/1:10,0:10:0:1,0,0	1/1:14,1:14:0.47:2,0,0	0/1:3,1:5:0.06:0,0,0	1/1:24,0:23:8.85:58,9,0	0/0:19,0:19:14.43:0,14,166	0/1:15,1:16:43.73:44,0,52	1/1:8,0:8:1.76:16,2,0
chr10	36305233	.	TGAGAGAGAAA	T	882.38	PASS	AB=0.969;AC=14;AF=0.292;AN=48;BaseQRankSum=-4.532;DP=317;FS=0.000;HRun=0;HaplotypeScore=250.9398;InbreedingCoeff=0.1763;MQ=46.99;MQ0=2;MQRankSum=-0.128;QD=6.54;ReadPosRankSum=-2.861;VQSLOD=1.8294;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:7,0:4:9.01:0,9,239	0/0:7,0:4:9.03:0,9,223	0/0:29,2:31:7.22:0,7,46	0/1:10,0:10:12.20:27,0,12	./.	0/1:10,1:10:25.82:87,0,26	0/0:14,1:14:11.73:0,12,43	0/1:19,2:20:75.65:288,0,76	0/1:12,1:13:0:1,0,0	0/0:10,0:10:2.27:0,2,6	0/1:15,0:15:49.32:145,0,49	0/1:9,0:9:0.10:0,0,0	0/0:12,0:12:2.68:0,3,24	0/0:11,0:11:7.30:0,7,30	0/0:5,0:5:8.92:0,9,65	0/0:6,0:6:3.87:0,4,24	1/1:6,0:5:3.28:9,3,0	0/0:18,0:18:8.31:0,8,59	./.	0/1:10,0:10:0.23:1,0,0	0/1:12,0:12:0:0,0,0	0/1:5,0:5:0:1,0,0	0/0:21,1:21:8:0,8,43	1/1:11,0:14:7.64:395,8,0	0/0:16,0:16:14.66:0,15,156	0/1:8,0:8:4.24:50,0,4
chr10	36305236	.	GAGAGAA	G	790.43	PASS	AB=1.000;AC=22;AF=0.458;AN=48;BaseQRankSum=-1.432;DP=194;FS=0.983;HRun=0;HaplotypeScore=166.0163;InbreedingCoeff=0.2236;MQ=55.80;MQ0=1;MQRankSum=-0.678;QD=6.93;ReadPosRankSum=-0.632;VQSLOD=2.1582;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:8,0:5:9.03:0,9,168	0/0:7,0:4:5.56:0,6,129	0/0:19,1:20:0.20:0,0,7	0/1:6,0:6:8.27:37,0,8	./.	0/1:2,0:2:7.88:46,0,8	1/1:7,0:7:6.57:39,7,0	1/1:13,1:14:0.07:258,0,0	0/1:12,0:12:0:1,0,0	0/0:5,1:6:2.21:0,2,8	0/1:8,0:8:16.39:92,0,16	0/1:7,0:7:0.21:0,0,0	0/0:5,0:5:2.48:0,2,11	1/1:8,0:8:4.15:10,4,0	0/0:4,0:4:6.05:0,6,20	0/1:3,0:3:2.30:2,0,5	1/1:2,0:2:5.44:24,5,0	0/0:11,0:11:5.28:0,5,18	./.	0/1:8,0:8:0:0,0,0	0/1:7,0:7:0.01:0,0,0	0/1:2,0:2:0:0,0,0	0/0:12,0:12:1.52:0,2,7	1/1:8,2:10:25.90:313,26,0	0/1:11,0:11:7.81:8,0,59	1/1:7,0:7:9.26:84,9,0
chr10	36305238	.	GAGAA	G	1000.30	PASS	AB=0.993;AC=31;AF=0.646;AN=48;BaseQRankSum=0.874;DP=193;FS=5.782;HRun=0;HaplotypeScore=162.8411;InbreedingCoeff=0.2356;MQ=55.94;MQ0=1;MQRankSum=0.786;QD=5.95;ReadPosRankSum=0.786;VQSLOD=1.9180;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:7,0:5:8.92:0,9,118	0/1:7,0:4:1.43:1,0,78	1/1:16,4:20:5.02:44,5,0	0/1:6,0:6:3.11:32,0,3	./.	0/1:2,0:2:3.23:27,0,3	1/1:7,0:7:14.47:89,14,0	1/1:14,0:14:22.52:258,23,0	0/1:11,1:12:0:1,0,0	0/0:6,0:6:0.46:0,0,1	0/1:8,0:8:3.81:75,0,4	0/1:7,0:7:0.22:0,0,0	0/0:5,0:5:1.82:0,2,8	1/1:7,1:8:5.45:61,5,0	1/1:4,0:4:6.31:24,6,0	1/1:3,0:3:0.82:18,1,0	1/1:2,0:2:6.01:58,6,0	0/1:11,0:11:2.32:3,0,2	./.	0/1:8,0:8:0.01:0,0,0	0/1:7,0:7:0.01:0,0,0	0/1:2,0:2:0:0,0,0	1/1:12,0:12:4.46:15,4,0	1/1:10,0:10:29.97:287,30,0	0/1:11,0:11:24.25:24,0,24	1/1:6,1:7:11.14:96,11,0
chr10	36305246	.	GCATA	G	1989.95	PASS	AB=0.915;AC=36;AF=0.750;AN=48;BaseQRankSum=0.567;DP=200;FS=0.000;HRun=0;HaplotypeScore=162.8570;InbreedingCoeff=0.2996;MQ=55.88;MQ0=0;MQRankSum=-2.231;QD=11.71;ReadPosRankSum=3.574;VQSLOD=2.9713;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:6,0:5:8.96:0,9,71	0/1:6,0:4:17.33:17,0,24	1/1:20,0:20:4.48:41,4,0	1/1:3,3:6:5.77:74,6,0	./.	1/1:1,1:2:5.97:69,6,0	1/1:7,0:7:11.37:68,11,0	1/1:8,7:15:44.93:623,45,0	1/1:7,6:13:3.01:51,3,0	0/0:7,0:7:3:0,3,51	1/1:4,4:8:17.79:211,18,0	0/1:6,1:7:0.01:0,0,0	1/1:5,1:6:2.97:21,3,0	1/1:8,0:8:5.44:60,5,0	0/1:4,0:4:10.44:13,0,10	1/1:1,2:3:5.97:77,6,0	1/1:1,1:2:6.02:115,6,0	1/1:3,8:11:8.79:61,9,0	./.	0/1:3,5:8:0.01:0,0,0	0/0:9,0:9:3:0,3,60	0/1:2,0:2:0:0,0,0	1/1:7,6:13:11.90:135,12,0	1/1:9,1:10:29.77:242,30,0	1/1:9,2:11:19.16:163,19,0	0/1:8,0:8:6.82:75,0,7
chr10	36305247	.	CAT	C	956.62	PASS	AB=0.939;AC=32;AF=0.667;AN=48;BaseQRankSum=-0.892;DP=206;FS=4.867;HRun=0;HaplotypeScore=166.9318;InbreedingCoeff=0.3600;MQ=55.28;MQ0=0;MQRankSum=-3.079;QD=5.98;ReadPosRankSum=3.782;VQSLOD=2.8560;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:6,0:5:3.97:0,4,47	0/1:5,1:4:23.36:35,0,23	1/1:20,0:20:2.68:8,3,0	1/1:4,2:6:5.37:36,5,0	./.	1/1:2,0:2:5.95:44,6,0	0/0:7,0:7:0.95:0,1,7	1/1:13,2:15:43.34:356,43,0	1/1:13,0:13:3.01:33,3,0	0/0:7,0:7:3.01:0,3,39	1/1:8,0:8:15.92:141,16,0	0/1:5,2:7:0.22:0,0,0	1/1:5,1:6:2.92:18,3,0	0/1:8,0:8:0.68:1,0,2	0/0:4,0:4:7.50:0,8,35	1/1:3,0:3:5.21:30,5,0	1/1:2,1:3:6.01:57,6,0	1/1:11,0:11:8.93:65,9,0	./.	0/1:8,0:8:0:0,0,0	0/0:11,0:11:3.01:0,3,54	0/1:2,0:2:0.13:0,0,0	1/1:13,0:13:11.91:89,12,0	1/1:10,0:10:13.63:54,14,0	1/1:10,1:11:15.42:93,15,0	0/1:8,0:8:10.42:28,0,10
chr10	36305249	.	T	TGC	991.28	PASS	AB=0.950;AC=24;AF=0.480;AN=50;BaseQRankSum=-1.692;DP=223;FS=4.241;HRun=0;HaplotypeScore=173.1753;InbreedingCoeff=0.4100;MQ=54.92;MQ0=1;MQRankSum=-2.210;QD=6.98;ReadPosRankSum=-0.723;VQSLOD=3.1586;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:5.99:0,6,51	./.	0/0:6,0:5:8.90:0,9,70	0/0:6,0:4:1.97:0,2,26	0/1:18,0:20:5.74:6,0,41	1/1:6,0:6:5.38:48,5,0	./.	0/1:2,0:2:1.38:1,0,15	0/0:8,0:8:11.95:0,12,98	1/1:13,3:16:13.82:298,14,0	1/1:9,4:13:2.93:58,3,0	0/0:7,0:7:2.77:0,3,21	1/1:6,3:9:15.35:150,15,0	0/1:4,3:7:0:0,0,0	1/1:4,2:6:2.93:19,3,0	0/0:8,0:8:6.84:0,7,72	0/0:4,0:4:8.92:0,9,68	0/1:3,0:3:1.42:38,0,1	0/0:4,0:3:1.53:0,2,4	1/1:11,2:13:11.23:145,11,0	./.	1/1:8,1:9:2.85:25,3,0	0/0:12,0:12:5.85:0,6,70	0/1:2,0:2:0.02:0,0,0	1/1:12,3:15:12.03:204,12,0	0/0:12,0:12:1.23:0,1,168	1/1:9,4:13:8.52:142,9,0	0/1:3,0:8:6.92:7,0,53
chr10	36305255	.	CACACAT	C	1081.81	PASS	AB=1.000;AC=12;AF=0.231;AN=52;BaseQRankSum=4.281;DP=294;FS=4.590;HRun=0;HaplotypeScore=193.8988;InbreedingCoeff=0.5951;MQ=52.44;MQ0=1;MQRankSum=-4.263;QD=14.62;ReadPosRankSum=2.857;VQSLOD=3.0585;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:6.02:0,6,197	0/0:7,0:7:6.02:0,6,95	0/0:6,0:5:5.80:0,6,75	0/0:7,0:4:0.47:0,0,2	1/1:13,14:27:8.34:143,8,0	0/0:9,0:9:5.70:0,6,70	./.	0/0:12,0:12:26.87:0,27,446	1/1:1,7:8:12.04:218,12,0	0/0:21,0:21:50.62:0,51,559	0/0:18,0:18:8.43:0,8,165	0/0:8,0:8:3:0,3,95	0/0:9,0:9:9.07:0,9,162	0/0:10,0:10:6.01:0,6,137	0/0:7,0:7:5.82:0,6,94	1/1:6,4:10:10.59:159,11,0	1/1:1,3:4:6.02:99,6,0	0/0:4,0:4:3.56:0,4,13	0/1:10,0:9:2.47:2,0,335	0/0:21,0:21:23.75:0,24,313	./.	0/0:10,0:10:6.01:0,6,77	0/0:13,0:13:9.02:0,9,265	0/1:2,0:2:0:0,0,0	0/0:19,0:19:20.82:0,21,282	1/1:1,12:13:24.93:608,25,0	0/0:14,0:14:29.37:0,29,413	0/0:11,0:11:15.97:0,16,118
chr10	36305259	.	CAT	C	305.01	PASS	AB=1.000;AC=12;AF=0.231;AN=52;BaseQRankSum=6.264;DP=316;FS=0.000;HRun=0;HaplotypeScore=189.7587;InbreedingCoeff=0.5604;MQ=46.45;MQ0=1;MQRankSum=-4.096;QD=3.86;ReadPosRankSum=4.107;VQSLOD=2.6428;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:6.02:0,6,99	0/0:7,0:7:5.99:0,6,50	0/0:5,0:3:5.81:0,6,34	./.	1/1:21,8:29:8.74:73,9,0	0/0:10,0:10:7.81:0,8,54	0/0:3,0:3:2.99:0,3,24	0/0:17,0:17:18.99:0,19,370	1/1:8,0:8:11.43:65,11,0	0/0:22,0:22:39.48:0,39,360	0/0:19,0:19:11.28:0,11,133	0/0:10,0:10:6.01:0,6,75	0/0:10,0:10:2.93:0,3,86	0/0:12,0:12:8.66:0,9,94	0/0:7,0:7:5.31:0,5,42	1/1:10,0:10:8.01:51,8,0	1/1:5,0:5:5.10:22,5,0	0/0:4,0:4:2.22:0,2,7	0/0:10,0:9:18.82:0,19,216	0/0:25,0:25:34.97:0,35,274	./.	0/0:10,0:10:5.98:0,6,47	0/0:14,0:14:12.01:0,12,150	0/1:3,0:3:0.16:0,0,0	0/0:19,0:19:20.05:0,20,180	1/1:13,0:13:25.19:221,25,0	0/0:14,0:14:25.48:0,25,246	0/1:11,0:11:22.88:23,0,54
chr10	36305834	.	A	ATCT	31060.22	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-9.019;DP=706;FS=0.327;HRun=0;HaplotypeScore=107.6187;InbreedingCoeff=0.9971;MQ=79.38;MQ0=0;MQRankSum=-6.017;QD=58.60;ReadPosRankSum=0.182;VQSLOD=6.5599;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:57:99:0,162,2729	1/1:2,4:8:24.08:536,24,0	0/0:24,0:24:60.08:0,60,896	0/0:16,0:16:39.13:0,39,675	1/1:5,4:9:18.89:322,19,0	1/1:1,15:17:45.12:1013,45,0	1/1:1,25:29:78.27:1794,78,0	1/1:3,23:27:72.25:1664,72,0	1/1:2,25:28:75.22:1705,75,0	1/1:4,30:34:99:2398,102,0	1/1:1,9:11:24.08:516,24,0	0/0:28,0:28:81.23:0,81,1368	1/1:2,17:20:57.15:1292,57,0	1/1:9,26:36:42.98:2034,43,0	1/1:2,24:27:69.20:1580,69,0	1/1:1,19:21:57.20:1348,57,0	1/1:2,39:41:99:2412,103,0	1/1:4,21:26:60.20:1383,60,0	1/1:4,14:18:54.18:1243,54,0	1/1:2,16:20:42.10:926,42,0	1/1:9,43:51:99:2506,114,0	1/1:2,21:23:60.12:1316,60,0	0/0:14,0:14:39.13:0,39,688	0/0:37,0:37:99:0,111,1931	1/1:3,19:23:54.19:1244,54,0	1/1:1,23:25:22.31:1631,22,0	1/1:1,22:23:63.21:1486,63,0	1/1:0,10:10:30.10:709,30,0
chr10	36305923	.	TCC	T	4788.14	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=6.843;DP=627;FS=11.199;HRun=9;HaplotypeScore=125.0044;InbreedingCoeff=0.9879;MQ=82.11;MQ0=1;MQRankSum=-0.870;QD=30.30;ReadPosRankSum=5.644;VQSLOD=3.6637;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,38:43:99:1188,102,0	0/0:14,0:14:36.12:0,36,569	0/0:22,0:21:9.59:0,10,602	0/0:26,0:24:45.06:0,45,711	1/1:1,14:14:39.12:454,39,0	0/0:20,0:21:57.19:0,57,917	0/0:32,0:34:92.75:0,93,1435	0/0:26,0:26:66.21:0,66,1037	1/1:4,17:21:51.11:594,51,0	0/0:23,0:23:66.23:0,66,1083	0/0:6,0:7:18.06:0,18,295	0/0:0,0:23:47.28:0,47,167	0/0:19,0:19:51.13:0,51,804	0/0:25,0:26:66.20:0,66,1013	0/0:27,0:28:72.24:0,72,1156	1/1:0,18:18:51.15:594,51,0	1/1:4,36:40:99:1293,111,0	0/0:33,0:33:99:0,99,1615	0/0:16,0:16:39.13:0,39,637	0/0:20,0:20:54.11:0,54,828	0/0:39,0:39:99:0,107,1726	0/0:15,0:15:42.14:0,42,688	0/0:1,0:11:19.96:0,20,70	0/0:5,0:22:51.86:0,52,232	0/0:29,0:29:78.27:0,78,1272	1/1:1,11:12:30.08:349,30,0	0/0:14,0:13:39.12:0,39,615	1/1:0,9:9:27.08:315,27,0
chr10	36306107	.	G	GGA	12320.81	PASS	AB=1.000;AC=33;AF=0.589;AN=56;BaseQRankSum=6.766;DP=596;FS=3.913;HRun=0;HaplotypeScore=117.8519;InbreedingCoeff=0.8917;MQ=76.16;MQ0=6;MQRankSum=-1.803;QD=32.25;ReadPosRankSum=2.077;VQSLOD=7.1419;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:72.14:0,72,848	1/1:9,0:9:15.05:244,15,0	0/0:55,0:26:34.56:0,35,351	0/0:66,0:32:25.10:0,25,260	0/0:8,0:8:9.03:0,9,117	1/1:17,0:17:48.15:754,48,0	1/1:36,0:36:82.42:1182,82,0	1/1:29,0:29:63.08:732,63,0	0/0:5,0:5:11.96:0,12,120	1/1:29,0:29:60.10:871,60,0	1/1:20,0:20:48.13:755,48,0	0/0:5,0:5:15.05:0,15,195	1/1:20,0:19:14.96:679,15,0	1/1:28,0:28:69.08:971,69,0	1/1:19,0:19:45.14:697,45,0	0/0:8,0:8:18.05:0,18,221	0/0:16,0:16:30.05:0,30,345	1/1:22,0:22:54.09:779,54,0	1/1:20,0:20:41.08:540,41,0	1/1:19,0:19:45.15:723,45,0	1/1:32,14:46:81.27:1305,81,0	1/1:21,0:21:51.08:710,51,0	0/0:5,0:5:9.03:0,9,116	0/0:11,0:11:21.05:0,21,258	1/1:14,0:14:30.09:463,30,0	0/1:8,0:8:36.71:37,0,78	1/1:24,0:24:65.68:879,66,0	0/0:6,0:6:12.02:0,12,128
chr10	36306113	.	A	AGA	12291.31	PASS	AB=1.000;AC=33;AF=0.589;AN=56;BaseQRankSum=6.994;DP=566;FS=3.230;HRun=0;HaplotypeScore=114.1135;InbreedingCoeff=0.8901;MQ=70.03;MQ0=6;MQRankSum=-2.063;QD=33.58;ReadPosRankSum=3.713;VQSLOD=7.3759;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:72.14:0,72,848	1/1:5,2:8:15.05:244,15,0	0/0:49,0:20:34.68:0,35,351	0/0:60,0:26:25.10:0,25,260	0/0:6,0:6:9.03:0,9,117	1/1:18,0:18:48.15:754,48,0	1/1:35,0:35:82.42:1182,82,0	1/1:30,0:30:59.65:711,60,0	0/0:5,0:5:11.96:0,12,120	1/1:23,0:22:60.10:871,60,0	1/1:21,0:21:48.13:755,48,0	0/0:6,0:6:15.05:0,15,195	1/1:20,0:19:12.59:671,13,0	1/1:26,0:26:69.08:971,69,0	1/1:18,0:18:45.14:697,45,0	0/0:9,0:9:18.05:0,18,221	0/0:15,0:15:30.05:0,30,345	1/1:23,0:23:54.09:779,54,0	1/1:20,2:22:41.08:540,41,0	1/1:19,0:19:45.15:723,45,0	1/1:44,0:44:81.27:1305,81,0	1/1:20,0:20:51.08:710,51,0	0/0:5,0:5:9.03:0,9,116	0/0:8,0:8:21.05:0,21,258	1/1:12,0:12:30.09:463,30,0	0/1:5,0:5:36.71:37,0,78	1/1:22,0:22:65.68:879,66,0	0/0:7,0:7:12.02:0,12,128
chr10	36306116	.	G	GA	6396.08	PASS	AB=0.707;AC=29;AF=0.518;AN=56;BaseQRankSum=7.628;DP=566;FS=7.292;HRun=1;HaplotypeScore=128.7062;InbreedingCoeff=0.6515;MQ=68.90;MQ0=6;MQRankSum=-2.494;QD=17.77;ReadPosRankSum=9.204;VQSLOD=4.4680;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:70.85:0,71,911	1/1:4,3:7:14.99:130,15,0	0/0:44,1:18:30.42:0,30,335	0/0:61,0:27:39.49:0,39,370	0/0:4,0:4:9.03:0,9,124	1/1:3,14:17:31.07:410,31,0	0/1:14,20:34:1.56:566,0,2	0/1:23,9:32:38.15:416,0,38	0/0:11,0:11:26.91:0,27,246	1/1:6,15:20:59.59:494,60,0	1/1:6,15:21:30.86:382,31,0	0/0:9,0:9:24.03:0,24,282	0/1:7,14:20:8.57:318,0,9	1/1:8,18:27:47.82:474,48,0	1/1:7,11:18:10.08:339,10,0	0/0:11,0:11:27.93:0,28,313	0/0:14,0:14:42.08:0,42,495	1/1:10,13:23:16.26:438,16,0	0/1:13,8:21:99:290,0,113	1/1:5,13:17:44.71:357,45,0	1/1:15,26:41:12.40:640,12,0	1/1:6,13:19:45.52:359,46,0	0/0:5,0:5:12.03:0,12,146	0/0:10,0:10:30.05:0,30,352	1/1:4,9:13:14.10:254,14,0	0/1:3,1:4:12.95:13,0,81	1/1:10,13:23:48.59:517,49,0	0/0:7,0:7:15.04:0,15,186
chr10	36306121	.	G	GA	5906	PASS	AB=0.808;AC=32;AF=0.571;AN=56;BaseQRankSum=12.806;DP=554;FS=0.371;HRun=0;HaplotypeScore=133.4423;InbreedingCoeff=0.6980;MQ=65.70;MQ0=6;MQRankSum=-2.822;QD=14.80;ReadPosRankSum=7.574;VQSLOD=5.9674;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:26:72.01:0,72,905	1/1:5,3:8:14.98:124,15,0	0/1:41,0:15:28.06:28,0,263	0/0:55,0:23:15.85:0,16,254	0/0:5,0:5:12.03:0,12,152	1/1:3,14:17:43.21:407,43,0	1/1:15,20:35:24.91:512,25,0	0/1:17,9:27:5.74:303,0,6	0/0:10,0:10:26.94:0,27,247	1/1:5,15:19:51.86:412,52,0	1/1:5,15:21:21.12:328,21,0	0/0:11,0:11:27.04:0,27,312	1/1:8,14:21:10.93:338,11,0	1/1:2,19:29:33.92:401,34,0	1/1:8,11:19:23.23:337,23,0	0/0:11,0:11:27.52:0,28,313	0/0:13,0:13:39.08:0,39,488	1/1:11,13:24:46.26:485,46,0	0/1:13,8:21:99:271,0,112	1/1:4,13:16:43.70:319,44,0	1/1:13,26:39:67.67:721,68,0	1/1:6,13:19:27.50:290,28,0	0/0:6,0:6:12.03:0,12,152	0/0:10,0:10:30.04:0,30,349	1/1:4,9:13:32.94:283,33,0	0/1:3,1:4:14.90:15,0,59	1/1:9,13:22:10.06:332,10,0	0/0:7,0:7:18.03:0,18,216
chr10	36308510	.	A	ATGGTGGTGGTGGTGG	16908.95	PASS	AB=1.000;AC=31;AF=0.554;AN=56;BaseQRankSum=2.296;DP=637;FS=2.452;HRun=0;HaplotypeScore=211.5421;InbreedingCoeff=0.1455;MQ=48.03;MQ0=5;MQRankSum=-9.768;QD=35.15;ReadPosRankSum=4.323;VQSLOD=4.1543;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:48.60:0,49,1425	1/1:3,0:3:6.02:286,6,0	0/0:15,0:6:14.88:0,15,328	0/0:13,0:9:15.51:0,16,373	1/1:0,11:21:5.98:71,6,0	1/1:24,0:24:21.07:1024,21,0	0/1:22,0:22:19.98:20,0,66	0/1:25,0:23:99:135,0,364	1/1:4,21:33:39.09:2434,39,0	0/1:33,0:32:99:970,0,180	0/1:21,0:21:10.25:462,0,10	0/0:28,0:28:66.14:0,66,2077	0/1:20,0:20:13.83:590,0,14	0/1:33,0:33:23.89:1725,0,24	1/1:27,0:27:8.11:1470,8,0	1/1:0,21:24:24.08:1733,24,0	1/1:14,0:14:36.11:784,36,0	0/1:19,0:19:99:283,0,131	0/1:26,0:24:99:503,0,168	0/1:22,0:22:99:120,0,220	0/1:28,0:28:59.91:137,0,60	0/0:16,0:16:3.47:0,3,26	0/0:18,0:18:39.58:0,40,1287	0/0:33,0:33:69.18:0,69,2209	1/1:19,0:19:15.05:680,15,0	1/1:0,12:27:60.14:1910,60,0	0/1:28,0:27:99:565,0,118	1/1:0,10:11:15.05:1009,15,0
chr10	36308516	.	A	ATGGTGGTGGTGGTGG	24569.70	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-7.639;DP=624;FS=4.616;HRun=0;HaplotypeScore=177.2843;InbreedingCoeff=0.8600;MQ=48.50;MQ0=3;MQRankSum=-6.286;QD=49.24;ReadPosRankSum=-2.800;VQSLOD=4.1626;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:39.61:0,40,1348	1/1:0,2:4:6.02:438,6,0	0/0:11,0:3:9.01:0,9,184	0/0:12,0:8:15.35:0,15,371	1/1:14,0:14:5.95:64,6,0	1/1:0,19:27:21.07:1528,21,0	1/1:6,0:29:15.50:208,16,0	1/1:21,0:19:45.04:831,45,0	1/1:31,0:31:45.15:2549,45,0	1/1:3,17:34:77.01:2444,77,0	1/1:2,10:22:14.89:722,15,0	0/0:26,0:26:4.33:0,4,2021	1/1:0,15:23:11.42:874,11,0	1/1:3,26:35:39.09:2641,39,0	1/1:0,23:31:30.10:2183,30,0	1/1:19,0:19:27.09:1777,27,0	1/1:11,0:11:30.02:771,30,0	1/1:19,0:19:47.89:1252,48,0	1/1:2,0:24:69.08:1309,69,0	1/1:3,9:25:20.80:348,21,0	1/1:27,1:28:23.10:406,23,0	1/1:2,4:18:3.01:33,3,0	0/0:18,0:18:42.62:0,43,1407	0/0:28,0:28:59.99:0,60,2149	1/1:2,12:21:15.05:955,15,0	1/1:13,0:12:26.61:1214,27,0	1/1:3,15:33:14.87:900,15,0	1/1:14,0:14:26.99:1122,27,0
chr10	36308633	.	TA	T	14426.04	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=5.171;DP=667;FS=2.059;HRun=6;HaplotypeScore=72.5447;InbreedingCoeff=0.9989;MQ=88.06;MQ0=0;MQRankSum=-7.321;QD=27.69;ReadPosRankSum=4.803;VQSLOD=5.3622;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:19:54.14:0,54,679	1/1:1,10:11:27.07:290,27,0	0/0:22,0:22:56.88:0,57,629	0/0:29,0:29:70.63:0,71,829	1/1:1,26:27:78.10:811,78,0	1/1:1,25:26:66.03:680,66,0	1/1:0,23:23:66.10:694,66,0	1/1:3,20:23:60.09:623,60,0	1/1:0,20:20:51.13:547,51,0	1/1:2,21:23:63.15:670,63,0	1/1:1,28:29:75.18:806,75,0	0/0:21,1:22:31.05:0,31,749	1/1:2,25:27:72.14:760,72,0	1/1:3,24:27:66.10:694,66,0	1/1:0,23:23:63.16:677,63,0	1/1:0,14:14:42.11:451,42,0	1/1:0,18:18:51.13:548,51,0	1/1:1,16:17:42.11:451,42,0	1/1:5,22:27:63.07:639,63,0	1/1:3,38:41:99:1079,108,0	1/1:1,32:33:84.21:902,84,0	1/1:2,25:27:75.19:806,75,0	0/0:30,0:30:90.25:0,90,1164	0/0:23,0:23:63.03:0,63,767	1/1:3,20:23:54.13:580,54,0	1/1:4,20:24:60.13:636,60,0	1/1:2,29:31:81.15:856,81,0	1/1:0,7:7:21.05:226,21,0
chr10	36311280	.	T	TAA	5284.42	PASS	AB=0.576;AC=43;AF=0.768;AN=56;BaseQRankSum=-0.580;DP=412;FS=26.811;HRun=10;HaplotypeScore=47.4187;InbreedingCoeff=0.7577;MQ=53.85;MQ0=12;MQRankSum=-1.709;QD=16.99;ReadPosRankSum=-0.156;VQSLOD=1.3485;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:93.16:0,93,930	1/1:3,1:4:3.01:45,3,0	0/0:3,0:2:5.96:0,6,50	0/0:2,0:1:3.01:0,3,31	1/1:7,0:19:19.96:71,20,0	1/1:4,8:11:21.03:288,21,0	1/1:6,8:14:21.07:313,21,0	1/1:4,5:9:18.03:206,18,0	1/1:5,0:10:6.21:24,6,0	1/1:7,12:19:35.56:475,36,0	1/1:8,13:20:33.07:467,33,0	0/0:14,0:13:26.99:0,27,275	1/1:2,7:9:18.06:269,18,0	1/1:4,6:10:15.05:224,15,0	1/1:1,8:9:18.06:268,18,0	1/1:4,0:12:16.22:56,16,0	1/1:4,0:13:22.46:79,22,0	1/1:5,7:13:20.04:241,20,0	1/1:1,12:12:36.10:513,36,0	1/1:9,7:14:15.05:224,15,0	1/1:4,5:10:6.02:89,6,0	1/1:2,12:14:27.09:389,27,0	0/0:19,0:18:54.12:0,54,549	0/0:25,0:24:51.06:0,51,514	1/1:3,9:12:24.08:358,24,0	1/1:5,0:22:15.09:121,15,0	1/1:5,15:20:37.59:467,38,0	0/1:5,1:19:27.02:98,0,27
chr10	36311495	.	C	CCAA	12381.36	PASS	AB=0.955;AC=33;AF=0.589;AN=56;BaseQRankSum=-14.100;DP=616;FS=11.069;HRun=0;HaplotypeScore=78.1917;InbreedingCoeff=0.8802;MQ=61.10;MQ0=3;MQRankSum=0.069;QD=35.99;ReadPosRankSum=0.808;VQSLOD=5.2109;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:84.27:0,84,1171	1/1:3,4:8:12.51:245,13,0	0/0:28,0:23:16.45:0,16,468	0/0:22,0:14:27.06:0,27,349	0/1:20,1:21:19.08:19,0,482	1/1:7,18:25:45.15:911,45,0	1/1:9,8:17:14.56:305,15,0	1/1:6,14:20:44.76:742,45,0	0/0:16,0:16:36.07:0,36,472	1/1:9,23:31:33.90:1307,34,0	1/1:6,18:25:51.18:1039,51,0	0/0:30,0:30:69.23:0,69,993	1/1:3,12:16:30.10:579,30,0	1/1:2,16:18:42.14:856,42,0	1/1:3,23:27:51.18:1040,51,0	0/0:26,0:25:69.21:0,69,958	0/0:26,0:26:56.32:0,56,936	1/1:3,21:24:51.14:1040,51,0	1/1:7,9:16:30.10:582,30,0	1/1:5,13:19:42.10:815,42,0	1/1:4,14:18:36.12:734,36,0	1/1:5,14:19:36.12:702,36,0	0/0:23,0:23:57.19:0,57,817	0/0:23,0:23:48.15:0,48,673	1/1:2,11:13:27.09:551,27,0	0/0:36,1:38:0.10:0,0,976	1/1:6,16:24:45.15:913,45,0	0/0:6,0:6:18.06:0,18,259
chr10	36311946	.	T	TGC	1061.72	PASS	AB=0.962;AC=21;AF=0.375;AN=56;BaseQRankSum=6.163;DP=659;FS=26.807;HRun=0;HaplotypeScore=211.1168;InbreedingCoeff=-0.3638;MQ=40.76;MQ0=26;MQRankSum=-2.691;QD=2.21;ReadPosRankSum=1.910;VQSLOD=1.2007;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:26:32.81:0,33,259	0/1:11,0:11:1.28:21,0,1	0/0:15,0:4:8.99:0,9,80	0/0:27,0:6:14.71:0,15,119	0/1:33,2:36:36.87:45,0,37	0/1:25,0:25:9.53:10,0,33	0/1:25,0:24:21.27:21,0,38	0/1:30,0:28:83.78:84,0,264	0/1:9,0:10:12.58:39,0,13	0/1:34,0:32:99:172,0,111	0/0:23,0:22:16.71:0,17,122	0/1:26,0:26:13.12:13,0,73	0/1:10,0:10:1.23:1,0,50	0/1:15,0:15:51.32:51,0,52	0/0:14,0:14:1.14:0,1,3	0/1:13,3:16:15.42:15,0,39	0/1:32,1:35:62.89:208,0,63	0/0:15,0:14:25.75:0,26,169	0/1:25,0:23:14.48:14,0,189	0/1:38,0:38:76.65:77,0,129	0/1:32,0:28:5.77:6,0,34	0/0:18,0:18:14.98:0,15,124	0/1:19,0:19:2.07:2,0,117	0/0:38,0:37:29.23:0,29,302	1/1:28,0:27:8.75:62,9,0	0/1:26,5:31:99:252,0,121	0/1:24,0:24:72.11:72,0,103	0/1:8,1:10:50.62:51,0,69
chr10	36311954	.	T	TGC	1303.39	PASS	AB=0.988;AC=29;AF=0.518;AN=56;BaseQRankSum=1.950;DP=648;FS=7.586;HRun=0;HaplotypeScore=213.8991;InbreedingCoeff=-0.2568;MQ=40.11;MQ0=28;MQRankSum=2.143;QD=2.47;ReadPosRankSum=1.626;VQSLOD=1.8778;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:26:29.87:0,30,232	0/1:14,0:14:9.45:15,0,9	0/0:13,0:2:6:0,6,65	0/0:25,0:4:5.96:0,6,48	1/1:33,0:33:2.42:59,2,0	1/1:28,0:27:3.81:22,4,0	0/1:24,0:23:13.50:42,0,14	0/1:26,0:25:45.43:45,0,103	1/1:8,1:9:1.23:16,1,0	0/1:35,0:33:40.92:275,0,41	0/1:25,0:24:6.66:78,0,7	0/1:24,0:24:16.05:16,0,33	0/1:10,0:10:25.32:25,0,38	1/1:15,0:15:3.58:98,4,0	1/1:15,0:16:3.19:47,3,0	0/1:17,0:17:3.35:68,0,3	0/1:32,2:34:52.07:52,0,88	0/1:16,0:15:27.61:28,0,83	0/1:25,0:23:99:108,0,113	0/1:37,0:37:29.12:29,0,71	0/1:34,0:29:3.38:17,0,3	0/1:16,0:15:15.03:16,0,15	0/1:18,0:18:3.47:3,0,99	0/0:34,0:33:21.66:0,22,237	1/1:29,0:28:6.43:48,6,0	0/1:29,1:29:45.60:259,0,46	0/0:21,0:21:11.63:0,12,78	0/1:10,1:11:1.78:92,0,2
chr10	36312090	.	A	AGTGCTGGAATCAT	47690.88	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-1.692;DP=593;FS=21.332;HRun=0;HaplotypeScore=185.7574;InbreedingCoeff=0.9511;MQ=71.67;MQ0=0;MQRankSum=-15.488;QD=110.91;ReadPosRankSum=1.438;VQSLOD=3.1316;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,129,4736	1/1:2,5:13:27.09:1746,27,0	0/0:22,0:22:66.22:0,66,1867	0/0:30,0:29:75.73:0,76,2423	1/1:10,10:28:39.13:2208,39,0	1/1:6,3:19:15.05:791,15,0	1/1:6,3:16:24.08:1111,24,0	1/1:16,2:30:81.23:4557,81,0	1/1:13,6:26:48.16:2918,48,0	1/1:11,16:31:81.28:4795,81,0	1/1:5,6:15:15.05:882,15,0	0/0:28,0:28:75.25:0,75,2804	1/1:4,9:15:30.10:1869,30,0	1/1:2,9:14:33.11:2021,33,0	1/1:4,11:23:42.14:2486,42,0	1/1:3,6:14:27.09:1774,27,0	1/1:8,4:20:21.07:1367,21,0	1/1:6,4:11:27.09:1777,27,0	1/1:18,0:15:27.09:1174,27,0	1/1:11,8:23:51.17:2238,51,0	1/1:4,3:10:12.04:643,12,0	1/1:5,14:23:42.14:2640,42,0	0/0:20,0:20:57.17:0,57,2110	0/0:18,0:18:54.14:0,54,1911	1/1:6,26:37:87.30:5418,87,0	1/1:5,9:16:41.93:2634,42,0	1/1:2,12:26:39.13:2445,39,0	1/1:1,1:2:3.01:197,3,0
chr10	36312093	.	G	GCT	5287.40	PASS	AB=0.969;AC=30;AF=0.536;AN=56;BaseQRankSum=15.619;DP=483;FS=18.677;HRun=0;HaplotypeScore=233.5759;InbreedingCoeff=-0.0564;MQ=77.83;MQ0=0;MQRankSum=-15.452;QD=16.79;ReadPosRankSum=8.412;VQSLOD=2.7767;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,132,2104	1/1:10,0:10:26.05:222,26,0	0/0:23,0:23:69.22:0,69,1075	0/0:32,0:30:81.21:0,81,1263	0/1:20,0:20:28.68:277,0,29	0/1:8,0:8:64.90:65,0,73	0/1:13,0:13:48.12:89,0,48	0/1:16,0:16:52.42:234,0,52	1/1:17,0:17:6.70:345,7,0	0/1:26,2:28:18.60:565,0,19	0/1:12,0:12:89.29:89,0,89	0/0:26,0:26:75.25:0,75,1200	1/1:11,0:11:4.03:198,4,0	0/1:12,0:12:42.03:213,0,42	0/1:17,0:17:24.46:261,0,24	0/1:12,0:12:11.87:215,0,12	1/1:13,0:13:26.64:220,27,0	1/1:8,0:8:24.03:221,24,0	0/1:5,7:9:13.85:302,0,14	0/1:19,0:19:99:154,0,171	0/1:5,0:5:8.59:71,0,9	1/1:18,0:18:7.30:320,7,0	0/0:21,0:21:60.17:0,60,930	0/0:19,0:19:57.14:0,57,872	0/1:32,0:32:61.12:625,0,61	0/1:16,0:16:46.39:263,0,46	1/1:15,0:15:13.42:309,13,0	1/1:1,0:1:3:28,3,0
chr10	36313897	.	TTCTC	T	4668.45	PASS	AB=0.959;AC=28;AF=0.519;AN=54;BaseQRankSum=-8.122;DP=408;FS=4.661;HRun=0;HaplotypeScore=103.0145;InbreedingCoeff=-0.2464;MQ=57.50;MQ0=8;MQRankSum=4.280;QD=13.98;ReadPosRankSum=0.754;VQSLOD=4.2263;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:22,8:29:39.13:631,39,0	0/1:2,0:2:1.80:20,0,2	0/0:18,0:7:5.61:0,6,161	0/0:19,0:10:11.20:0,11,231	0/0:2,13:15:2.74:0,3,12	0/1:16,0:16:14.50:102,0,15	./.	1/1:29,0:26:36.17:595,36,0	1/1:10,0:10:4.13:239,4,0	0/1:17,0:17:28:233,0,28	0/1:10,0:11:31.21:38,0,31	0/1:15,0:16:42.89:52,0,43	0/1:13,0:14:17.56:256,0,18	0/1:12,0:12:2.98:39,0,3	0/1:11,0:12:35.30:84,0,35	1/1:15,0:16:35.29:436,35,0	0/1:12,0:13:5.67:318,0,6	0/1:15,0:13:52.67:96,0,53	0/1:16,0:16:50.29:240,0,50	0/0:3,0:3:2.97:0,3,20	0/0:9,0:9:1.36:0,1,17	0/1:10,0:10:9.75:151,0,10	0/1:21,0:20:36.28:64,0,36	0/1:4,0:14:17.64:18,0,19	1/1:10,0:10:16.36:265,16,0	0/1:17,0:18:13.48:482,0,13	0/1:20,0:20:29.62:30,0,83	1/1:10,0:9:10.20:280,10,0
chr10	36313899	.	C	CTGTG	3114.73	PASS	AB=1.000;AC=35;AF=0.648;AN=54;BaseQRankSum=-5.076;DP=411;FS=1.281;HRun=0;HaplotypeScore=111.1797;InbreedingCoeff=0.4363;MQ=56.18;MQ0=9;MQRankSum=0.207;QD=10.85;ReadPosRankSum=-2.793;VQSLOD=2.5959;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:27:1.20:1,0,120	1/1:2,0:2:6.01:70,6,0	0/0:18,0:7:13.18:0,13,168	0/0:17,0:8:15.94:0,16,270	1/1:15,0:15:0.47:1,0,0	1/1:17,0:17:26.79:385,27,0	./.	1/1:28,0:25:25.95:371,26,0	0/1:10,0:10:24.41:51,0,24	1/1:17,0:17:28.95:439,29,0	1/1:2,0:10:5.76:127,6,0	0/0:19,0:18:18.03:0,18,193	1/1:13,0:13:4.45:202,4,0	1/1:2,10:12:1.26:68,1,0	1/1:12,0:12:17.99:244,18,0	0/1:16,0:16:20.79:56,0,21	0/0:14,0:14:17.01:0,17,122	1/1:14,0:12:27.80:356,28,0	0/1:18,0:18:11.74:243,0,12	1/1:2,3:4:3.48:73,3,0	1/1:9,0:9:9:86,9,0	1/1:10,0:10:14.14:171,14,0	0/0:21,0:20:14.47:0,14,162	0/0:15,0:14:6.01:0,6,72	1/1:10,0:10:8.31:120,8,0	0/1:20,0:20:28.68:29,0,44	1/1:5,13:21:2.34:199,2,0	0/0:10,0:9:9.94:0,10,79
chr10	36313920	.	TGTGAGAGAGAGAGA	T	603.39	PASS	AB=1.000;AC=6;AF=0.107;AN=56;BaseQRankSum=-0.081;DP=395;FS=2.747;HRun=0;HaplotypeScore=161.0585;InbreedingCoeff=0.0926;MQ=47.08;MQ0=13;MQRankSum=-0.257;QD=7.94;ReadPosRankSum=-0.059;VQSLOD=2.7093;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:17,14:31:23.19:592,23,0	0/0:1,0:1:3:0,3,25	0/0:13,0:3:8.82:0,9,71	0/0:12,0:3:3.47:0,3,28	0/0:8,0:9:3.01:0,3,165	0/0:17,0:17:33.10:0,33,1246	0/0:21,0:20:18.06:0,18,641	0/0:24,0:18:50.43:0,50,588	0/1:8,0:9:12.17:12,0,446	0/0:15,0:15:44.99:0,45,1252	0/0:9,0:9:6.96:0,7,307	0/0:18,0:17:4.96:0,5,940	0/0:12,0:12:24.05:0,24,794	0/0:13,0:13:5.59:0,6,317	0/0:15,0:15:18.53:0,19,839	0/1:14,0:14:30.12:30,0,201	0/1:12,0:14:75.56:76,0,533	0/0:19,0:17:45.10:0,45,1574	0/0:13,0:13:36:0,36,1220	0/0:9,0:8:12.51:0,13,594	0/0:11,0:11:11.90:0,12,270	0/0:10,0:10:21.51:0,22,909	0/0:20,0:19:12.24:0,12,534	0/0:15,0:14:3.36:0,3,725	0/0:4,0:4:3:0,3,26	0/0:21,0:21:9.52:0,10,2255	0/0:18,0:18:27.05:0,27,1273	0/1:7,0:6:19.01:19,0,128
chr10	36314201	.	AT	A	442	PASS	AB=0.976;AC=9;AF=0.265;AN=34;BaseQRankSum=-2.490;DP=169;FS=0.000;HRun=16;HaplotypeScore=36.1692;InbreedingCoeff=0.2832;MQ=84.04;MQ0=3;MQRankSum=-0.573;QD=3.98;ReadPosRankSum=1.212;VQSLOD=-0.6607;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:4.05:0,4,10	./.	0/1:34,0:14:28.85:29,0,88	0/1:12,0:6:1.80:2,0,18	0/0:2,0:2:0:0,0,0	./.	0/0:2,0:2:0:0,0,0	0/0:9,0:12:0:0,0,1	./.	0/0:0,0:2:0:0,0,0	0/1:3,0:3:0:0,0,0	1/1:8,10:18:23.32:143,23,0	./.	./.	./.	0/0:1,0:1:0:0,0,0	./.	0/0:6,0:6:0:0,0,0	0/0:1,0:1:0:0,0,0	0/0:3,0:3:0:0,0,0	./.	./.	1/1:7,10:18:0.33:106,0,0	1/1:5,18:25:42.23:244,42,0	./.	./.	0/0:1,0:1:0:0,0,0	0/0:2,0:2:0:0,0,0
chr10	36316598	.	TGG	T	1788.74	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-4.817;DP=753;FS=6.674;HRun=3;HaplotypeScore=128.7524;InbreedingCoeff=0.9834;MQ=85.50;MQ0=0;MQRankSum=-4.341;QD=35.77;ReadPosRankSum=-0.612;VQSLOD=2.6686;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,49:50:99:1884,123,0	0/0:8,0:8:24.08:0,24,464	0/0:22,0:22:57.19:0,57,1040	0/0:26,0:26:77.86:0,78,1250	0/0:21,0:21:57.13:0,57,601	0/0:18,0:18:54.19:0,54,1029	0/0:30,0:30:87.30:0,87,1674	0/0:25,0:25:72.24:0,72,1332	0/0:29,0:29:63.22:0,63,853	0/0:34,0:34:99:0,99,1900	0/0:16,0:16:45.15:0,45,853	0/0:31,0:31:90.31:0,90,1704	0/0:33,0:33:99:0,99,1871	0/0:33,0:33:99:0,99,1887	0/0:45,0:45:99:0,135,2607	0/0:23,0:23:69.13:0,69,695	0/0:45,0:45:99:0,106,1273	0/0:29,0:29:84.29:0,84,1623	0/0:12,0:12:33.11:0,33,638	0/0:15,0:15:45.15:0,45,869	0/0:57,0:57:99:0,169,3229	0/0:26,0:26:72.25:0,72,1382	0/0:19,0:19:57.20:0,57,1096	0/0:31,0:31:93.31:0,93,1740	0/0:17,0:16:48.16:0,48,909	0/0:22,0:22:66.08:0,66,642	0/0:20,0:20:60.21:0,60,1159	0/0:16,0:16:15.39:0,15,310
chr10	36316870	.	C	CAG	11468.78	PASS	AB=0.846;AC=37;AF=0.685;AN=54;BaseQRankSum=-4.194;DP=598;FS=0.000;HRun=0;HaplotypeScore=93.6134;InbreedingCoeff=0.7249;MQ=65.29;MQ0=29;MQRankSum=0.849;QD=28.39;ReadPosRankSum=4.634;VQSLOD=5.8824;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:33,0:33:44.32:1041,44,0	1/1:7,0:7:12.04:181,12,0	0/0:42,0:19:36.15:0,36,638	0/0:51,0:24:54.15:0,54,898	1/1:5,14:19:2.98:21,3,0	1/1:23,0:21:45.15:734,45,0	1/1:20,0:18:41.86:660,42,0	1/1:9,25:36:61.90:1069,62,0	0/1:17,0:16:7.72:438,0,8	1/1:6,19:24:29.21:820,29,0	./.	0/0:15,0:15:32.72:0,33,480	0/1:3,18:22:0.03:1,0,0	0/1:16,0:15:11.71:365,0,12	1/1:27,0:27:16.91:815,17,0	1/1:16,0:16:29.92:494,30,0	1/1:16,1:15:42.14:674,42,0	1/1:13,0:13:36.12:560,36,0	1/1:5,17:22:24.08:724,24,0	0/0:5,12:14:3:0,3,25	1/1:32,0:32:22.84:903,23,0	0/0:10,12:21:5.80:0,6,66	0/0:16,0:15:36.12:0,36,549	0/0:21,0:18:41.49:0,41,616	1/1:15,0:15:30.10:503,30,0	1/1:3,13:15:38.63:614,39,0	1/1:9,0:9:12.64:266,13,0	1/1:18,0:16:38.78:588,39,0
chr10	36317333	.	TATCAC	T	1771.84	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.523;DP=776;FS=5.925;HRun=0;HaplotypeScore=149.7688;InbreedingCoeff=0.9973;MQ=80.92;MQ0=0;MQRankSum=-7.837;QD=45.43;ReadPosRankSum=-0.160;VQSLOD=3.6890;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,36:39:84.29:1867,84,0	0/0:11,0:11:30.10:0,30,969	0/0:20,0:20:57.19:0,57,1629	0/0:30,0:30:64.33:0,64,2369	0/0:26,0:26:72.23:0,72,2176	0/0:15,0:15:45.15:0,45,1380	0/0:37,0:37:99:0,108,3460	0/0:36,0:35:99:0,108,3290	0/0:27,0:27:81.28:0,81,2557	0/0:22,0:22:66.23:0,66,2010	0/0:12,0:12:36.12:0,36,1136	0/0:24,0:24:72.25:0,72,2234	0/0:32,0:32:96.32:0,96,3020	0/0:43,0:43:99:0,126,3972	0/0:33,0:33:90.31:0,90,2866	0/0:23,0:23:69.24:0,69,2225	0/0:44,0:44:99:0,126,3909	0/0:27,0:27:81.28:0,81,2523	0/0:25,0:25:75.26:0,75,2299	0/0:19,0:19:54.17:0,54,1645	0/0:57,0:57:99:0,166,5226	0/0:20,0:20:57.20:0,57,1769	0/0:16,0:16:45.15:0,45,1384	0/0:32,0:32:93.32:0,93,2960	0/0:28,0:28:81.28:0,81,2560	0/0:36,0:36:99:0,108,3442	0/0:30,0:30:90.31:0,90,2776	0/0:12,0:12:24.08:0,24,775
chr10	36318386	.	GC	G	1337.82	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=4.542;DP=600;FS=12.617;HRun=1;HaplotypeScore=74.0086;InbreedingCoeff=0.6497;MQ=76.00;MQ0=0;MQRankSum=0.084;QD=31.85;ReadPosRankSum=-1.780;VQSLOD=1.7440;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,35:35:99:1426,102,0	0/0:8,0:8:24.08:0,24,370	0/1:7,0:7:16.50:17,0,151	0/0:19,0:19:21.24:0,21,253	0/0:16,0:16:48.15:0,48,744	0/0:24,0:23:72.25:0,72,1151	0/0:41,0:41:99:0,123,1966	0/0:15,0:15:45.15:0,45,717	0/0:20,0:20:57.19:0,57,909	0/0:29,0:28:84.27:0,84,1303	0/0:13,0:13:39.12:0,39,600	0/0:14,0:14:42.14:0,42,657	0/0:17,0:17:48.16:0,48,767	0/0:23,0:23:69.24:0,69,1096	0/0:37,0:37:99:0,108,1722	0/0:21,0:21:63.21:0,63,1007	0/0:35,0:35:99:0,105,1678	0/0:26,0:26:78.27:0,78,1247	0/0:26,0:26:78.26:0,78,1219	0/0:15,0:15:45.15:0,45,719	0/0:29,0:29:87.30:0,87,1388	0/0:14,0:14:42.14:0,42,670	0/0:12,0:12:33.11:0,33,521	0/0:26,0:26:78.22:0,78,1218	0/0:23,0:23:66.21:0,66,1054	0/0:24,0:24:72.25:0,72,1151	0/0:22,0:21:66.20:0,66,1028	0/0:9,0:9:27.09:0,27,432
chr10	36319679	.	T	TTTTGTTTGTTTGTTTG	37916.14	PASS	AB=0.607;AC=37;AF=0.661;AN=56;BaseQRankSum=-6.639;DP=752;FS=0.000;HRun=0;HaplotypeScore=330.3040;InbreedingCoeff=0.7702;MQ=68.59;MQ0=0;MQRankSum=-13.733;QD=70.09;ReadPosRankSum=-6.104;VQSLOD=2.3847;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:40:30.96:1102,31,0	1/1:8,8:17:36.12:2566,36,0	0/0:32,0:30:30.09:0,30,757	0/0:31,0:31:30.39:0,30,1401	0/1:13,0:24:24.82:25,0,281	1/1:20,4:24:33.11:2394,33,0	1/1:26,6:35:36.12:2544,36,0	1/1:38,0:33:48.16:1803,48,0	0/0:5,0:29:56.60:0,57,577	1/1:22,6:29:45.15:2322,45,0	1/1:11,7:19:36.12:2445,36,0	0/0:30,0:30:75.26:0,75,3251	1/1:17,7:24:39.13:2790,39,0	1/1:34,0:43:61.76:3670,62,0	1/1:19,11:31:42.14:2724,42,0	0/1:7,0:28:7.92:8,0,331	0/0:12,0:39:37.15:0,37,680	1/1:12,4:20:18.06:1304,18,0	1/1:23,6:29:42.06:1756,42,0	1/1:16,2:18:24.08:1702,24,0	1/1:15,0:15:27.09:831,27,0	1/1:15,6:24:39.13:2396,39,0	0/0:12,0:12:27.09:0,27,1195	0/0:26,0:26:20.63:0,21,2318	1/1:12,7:22:39.13:2644,39,0	0/1:5,0:22:99:119,0,274	1/1:22,9:33:42.14:2772,42,0	0/0:1,0:12:26.54:0,27,307
chr10	36322444	.	TC	T	14294.13	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=5.106;DP=576;FS=1.373;HRun=5;HaplotypeScore=61.3765;InbreedingCoeff=0.9992;MQ=84.06;MQ0=0;MQRankSum=-4.756;QD=30.35;ReadPosRankSum=4.090;VQSLOD=5.4254;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:48.15:0,48,649	1/1:1,9:10:24.07:272,24,0	0/0:17,0:17:44:0,44,505	0/0:16,0:16:39.13:0,39,534	1/1:1,28:30:81.23:918,81,0	1/1:0,23:23:63.18:715,63,0	1/1:3,16:19:39.11:442,39,0	1/1:2,27:29:81.23:919,81,0	1/1:3,19:22:54.15:612,54,0	1/1:1,18:19:51.08:553,51,0	1/1:0,14:14:39.11:442,39,0	0/0:20,0:20:57.15:0,57,731	1/1:0,22:22:66.19:748,66,0	1/1:2,30:32:87.25:985,87,0	1/1:0,18:18:48.14:545,48,0	1/1:2,14:16:30.08:340,30,0	1/1:1,27:28:78.22:885,78,0	1/1:1,27:28:72.21:817,72,0	1/1:2,26:28:78.22:885,78,0	1/1:1,21:22:63.18:715,63,0	1/1:1,16:17:45.13:511,45,0	1/1:1,15:16:45.13:510,45,0	0/0:17,0:17:48.16:0,48,657	0/0:15,0:15:39.13:0,39,534	1/1:3,22:25:69.19:778,69,0	1/1:0,23:23:69.20:783,69,0	1/1:2,18:20:54.15:612,54,0	1/1:1,9:10:27.08:306,27,0
chr10	36325863	.	TAGG	T	1285.23	PASS	AB=0.938;AC=3;AF=0.054;AN=56;BaseQRankSum=0.647;DP=751;FS=14.032;HRun=0;HaplotypeScore=148.1937;InbreedingCoeff=0.6957;MQ=81.44;MQ0=0;MQRankSum=-3.566;QD=22.95;ReadPosRankSum=1.050;VQSLOD=3.0347;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,38:41:87.30:1380,87,0	0/0:13,0:13:39.13:0,39,831	0/0:32,0:32:69.24:0,69,1441	0/0:22,0:22:54.18:0,54,1159	0/0:24,0:24:63.22:0,63,1347	0/1:14,1:15:1.72:2,0,856	0/0:29,0:29:84.29:0,84,1837	0/0:23,0:23:67.11:0,67,1435	0/0:35,0:35:99:0,99,2004	0/0:36,0:36:99:0,99,2155	0/0:17,0:17:45.14:0,45,943	0/0:34,0:34:96.29:0,96,2044	0/0:25,0:25:72.25:0,72,1574	0/0:35,0:35:99:0,99,2099	0/0:40,0:40:99:0,111,2404	0/0:29,0:29:84.25:0,84,1753	0/0:45,0:45:99:0,126,2637	0/0:27,0:27:63.21:0,63,1295	0/0:10,0:10:18.06:0,18,385	0/0:24,0:24:69.22:0,69,1446	0/0:45,0:45:99:0,117,2516	0/0:29,0:29:72.25:0,72,1538	0/0:19,0:19:51.17:0,51,1092	0/0:23,0:23:69.24:0,69,1442	0/0:20,0:20:48.16:0,48,1034	0/0:32,0:32:87.25:0,87,1779	0/0:25,0:25:69.24:0,69,1498	0/0:2,0:2:6.02:0,6,131
chr10	36326286	.	C	CGTGTGTGTGTGTGTGT	16517.37	PASS	AB=1.000;AC=51;AF=0.911;AN=56;BaseQRankSum=-1.522;DP=718;FS=16.803;HRun=0;HaplotypeScore=315.9870;InbreedingCoeff=0.5057;MQ=53.81;MQ0=6;MQRankSum=-1.430;QD=24.73;ReadPosRankSum=3.506;VQSLOD=2.2632;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:34,0:31:10.79:565,11,0	1/1:12,0:12:9.03:169,9,0	0/0:31,0:23:11.41:0,11,378	0/0:19,0:17:3.01:0,3,110	0/1:17,0:15:0.03:0,0,0	1/1:28,0:23:21.07:1181,21,0	1/1:40,0:34:29.98:924,30,0	1/1:33,0:31:35.14:700,35,0	1/1:29,0:28:15.77:836,16,0	1/1:27,0:27:30.10:1517,30,0	1/1:15,0:14:4.24:28,4,0	1/1:42,3:44:13.46:1010,13,0	1/1:22,0:20:18.04:583,18,0	1/1:30,1:33:8.59:625,9,0	1/1:32,0:32:15.52:915,16,0	1/1:35,0:33:14.59:491,15,0	1/1:22,0:22:30:945,30,0	1/1:14,0:13:9.03:333,9,0	1/1:17,0:15:18.06:966,18,0	1/1:24,0:23:6.02:358,6,0	1/1:38,0:37:3.48:42,3,0	1/1:29,0:26:9.34:580,9,0	1/1:22,0:24:2.57:224,3,0	1/1:31,3:34:11.08:905,11,0	1/1:18,1:21:9.03:503,9,0	1/1:19,0:17:21.07:1217,21,0	1/1:14,0:14:9.92:492,10,0	1/1:7,0:7:9.03:407,9,0
chr10	36326510	.	GGTGT	G	6802.49	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=10.296;DP=520;FS=0.959;HRun=0;HaplotypeScore=147.0914;InbreedingCoeff=0.8781;MQ=73.35;MQ0=3;MQRankSum=-4.580;QD=17.35;ReadPosRankSum=5.364;VQSLOD=4.6337;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:18:4.17:43,4,0	1/1:3,0:3:2.97:20,3,0	0/0:34,0:28:54.96:0,55,1078	0/0:34,0:30:43.41:0,43,1308	1/1:1,9:10:14.81:261,15,0	1/1:16,0:16:22.18:155,22,0	1/1:29,0:29:59.45:424,59,0	1/1:18,0:17:29.69:216,30,0	1/1:0,18:18:48.16:834,48,0	1/1:13,0:13:29.73:208,30,0	1/1:11,0:11:5.93:39,6,0	0/0:21,0:21:54.19:0,54,1306	1/1:11,1:12:29.58:223,30,0	1/1:21,0:21:31.92:215,32,0	1/1:14,0:14:22.29:155,22,0	1/1:2,18:20:51.17:886,51,0	1/1:4,25:29:45.15:782,45,0	1/1:16,0:16:32:231,32,0	1/1:12,0:12:17.85:126,18,0	1/1:14,0:13:23.74:157,24,0	1/1:43,0:43:58.35:395,58,0	1/1:15,0:15:29.67:197,30,0	0/0:14,0:14:30.10:0,30,697	0/0:25,0:25:69.24:0,69,1707	1/1:25,0:25:50.46:338,50,0	1/1:3,11:14:30.09:494,30,0	1/1:19,0:19:46.94:300,47,0	1/1:0,2:2:6.02:104,6,0
chr10	36326521	.	GTGT	G	10946.99	PASS	AB=1.000;AC=42;AF=0.750;AN=56;BaseQRankSum=11.085;DP=527;FS=2.409;HRun=0;HaplotypeScore=113.3809;InbreedingCoeff=0.5604;MQ=63.90;MQ0=21;MQRankSum=-5.868;QD=27.16;ReadPosRankSum=7.421;VQSLOD=4.8054;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:2,1:17:14.38:102,14,0	1/1:0,3:3:3.01:56,3,0	0/0:29,0:22:60.61:0,61,1118	0/0:36,1:33:31.47:0,31,1463	0/1:12,0:12:62.18:92,0,62	1/1:0,20:20:30.10:517,30,0	1/1:2,25:25:60.21:1100,60,0	1/1:1,15:15:33.10:564,33,0	1/1:19,0:19:22.09:342,22,0	1/1:0,13:13:36.08:558,36,0	1/1:0,11:11:6.02:112,6,0	0/0:20,0:20:60.19:0,60,1259	1/1:2,11:12:30.08:519,30,0	1/1:2,17:19:36.12:650,36,0	1/1:0,11:11:30.10:517,30,0	0/1:21,0:21:26.50:335,0,26	0/1:32,0:32:57.84:291,0,58	1/1:1,15:15:36.12:627,36,0	1/1:3,9:9:27.07:410,27,0	1/1:1,14:14:24.08:447,24,0	1/1:5,43:44:57.49:1143,57,0	1/1:2,13:13:30.10:559,30,0	0/0:13,0:13:36.12:0,36,707	0/0:25,0:25:75.25:0,75,1630	1/1:2,24:24:51.17:950,51,0	0/1:14,0:14:25.44:177,0,25	1/1:1,16:18:48.14:834,48,0	1/1:2,0:2:5.98:46,6,0
chr10	36329180	.	C	CT	740.55	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=-3.689;DP=642;FS=0.710;HRun=8;HaplotypeScore=63.3830;InbreedingCoeff=0.6236;MQ=73.01;MQ0=0;MQRankSum=-0.059;QD=14.81;ReadPosRankSum=1.726;VQSLOD=3.5664;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,27:32:72.21:831,72,0	0/0:4,0:4:12.01:0,12,110	0/1:18,0:18:14.06:14,0,164	0/0:12,0:12:11.50:0,12,124	0/0:36,0:36:98.95:0,99,878	0/0:31,0:31:84:0,84,758	0/0:31,0:31:80.98:0,81,725	0/0:33,0:33:80.99:0,81,726	0/0:23,0:23:62.91:0,63,560	0/0:26,0:26:72.03:0,72,657	0/0:19,0:19:48:0,48,430	0/0:21,0:21:53.99:0,54,485	0/0:15,0:15:39.02:0,39,357	0/0:22,0:22:65.96:0,66,580	0/0:21,0:21:57.02:0,57,519	0/0:20,0:20:54:0,54,485	0/0:32,0:32:84.01:0,84,759	0/0:31,0:31:74.96:0,75,670	0/0:20,0:20:51.02:0,51,463	0/0:23,0:23:60.02:0,60,549	0/0:17,0:17:42.02:0,42,384	0/0:18,0:18:51.02:0,51,467	0/0:14,0:14:42.02:0,42,384	0/0:40,0:39:99:0,105,916	0/0:14,0:14:41.99:0,42,370	0/0:29,0:29:72.01:0,72,652	0/0:33,0:33:90.03:0,90,819	0/0:6,0:6:18.01:0,18,165
chr10	36329553	.	CT	C	7076.90	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=4.783;DP=525;FS=1.144;HRun=10;HaplotypeScore=77.8577;InbreedingCoeff=0.9739;MQ=67.51;MQ0=1;MQRankSum=-2.237;QD=15.76;ReadPosRankSum=3.592;VQSLOD=5.4346;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,0:20:34.63:102,35,0	1/1:0,12:12:26.99:234,27,0	0/0:14,0:13:11.02:0,11,201	0/0:10,0:8:15.62:0,16,143	1/1:5,0:25:40.74:120,41,0	1/1:1,19:20:50.98:443,51,0	1/1:0,12:12:29.99:260,30,0	1/1:5,19:24:56.97:495,57,0	1/1:1,0:19:32.59:96,33,0	1/1:2,18:21:56.98:494,57,0	1/1:2,25:27:74.97:651,75,0	0/0:18,1:19:13.83:0,14,390	1/1:1,18:19:41.99:365,42,0	1/1:2,15:17:31.37:284,31,0	1/1:1,15:16:35.99:313,36,0	1/1:3,0:16:22.40:66,22,0	1/1:1,0:18:32.59:96,33,0	1/1:2,19:21:56.86:484,57,0	1/1:4,17:21:50.95:436,51,0	1/1:0,25:25:68.97:599,69,0	1/1:0,4:4:12:104,12,0	1/1:0,16:16:38.94:332,39,0	0/0:20,0:20:51.13:0,51,555	0/0:12,0:12:27.06:0,27,290	1/1:2,12:14:32.99:287,33,0	1/1:4,0:27:46.85:138,47,0	1/1:8,24:32:65.95:573,66,0	1/1:1,0:22:36.67:108,37,0
chr10	36330753	.	AGAAGAGGAGGAG	A	7768.33	PASS	AB=1.000;AC=22;AF=0.393;AN=56;BaseQRankSum=12.123;DP=603;FS=3.136;HRun=0;HaplotypeScore=272.3451;InbreedingCoeff=-0.4989;MQ=49.90;MQ0=26;MQRankSum=-10.486;QD=17.04;ReadPosRankSum=1.654;VQSLOD=3.0245;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:15,24:39:26.41:621,26,0	0/1:5,0:5:8.97:143,0,9	0/0:22,0:7:3.49:0,3,92	0/0:39,0:8:2.04:0,2,6	0/1:13,0:12:27.84:28,0,150	0/1:23,0:23:99:485,0,181	0/1:27,0:25:95.44:522,0,95	0/1:34,0:30:0.17:0,0,168	0/0:8,0:7:8.03:0,8,133	0/1:23,0:22:99:432,0,105	0/1:21,0:21:60.21:541,0,60	0/0:24,0:23:51.14:0,51,2191	0/1:25,0:25:60.70:626,0,61	0/1:26,0:26:99:710,0,131	0/1:25,0:24:99:474,0,139	0/1:15,0:15:36.07:293,0,36	0/1:23,0:21:68.82:69,0,151	0/1:19,0:19:99:248,0,191	0/1:19,0:17:99:199,0,139	0/1:18,0:18:66.24:321,0,66	0/1:15,0:15:96.27:96,0,117	0/1:14,0:13:14.89:444,0,15	0/0:22,0:22:54.17:0,54,2255	0/0:25,0:24:41.07:0,41,1260	0/1:25,0:24:99:401,0,124	0/1:26,0:26:99:457,0,204	0/1:21,0:21:60.04:659,0,60	0/0:6,0:4:8.98:0,9,91
chr10	36330774	.	GGAGGAAGAGGAGGAA	G	20142.13	PASS	AB=0.949;AC=40;AF=0.714;AN=56;BaseQRankSum=10.047;DP=608;FS=7.389;HRun=0;HaplotypeScore=288.1020;InbreedingCoeff=0.4385;MQ=39.62;MQ0=31;MQRankSum=-8.003;QD=40.77;ReadPosRankSum=0.153;VQSLOD=3.0123;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:32:99:137,0,331	1/1:5,0:5:9.03:303,9,0	0/0:18,0:6:12.02:0,12,187	0/0:25,0:3:9.03:0,9,187	1/1:8,6:14:3.01:94,3,0	1/1:28,0:27:42.14:1351,42,0	0/1:32,0:22:25.74:1024,0,26	1/1:32,0:24:25.17:368,25,0	0/1:9,0:7:25.80:145,0,26	1/1:27,0:26:51.16:1436,51,0	1/1:23,0:23:44.92:1323,45,0	0/0:25,0:24:51.17:0,51,2698	1/1:30,0:30:63.22:1877,63,0	1/1:26,0:25:54.12:1582,54,0	0/1:25,0:24:5.11:1424,0,5	1/1:3,12:15:15.05:546,15,0	0/1:10,8:16:18.34:157,0,18	0/1:19,0:19:15.42:817,0,15	1/1:26,0:19:16.10:816,16,0	1/1:21,0:20:45.09:1090,45,0	1/1:17,0:17:14.97:323,15,0	1/1:12,0:11:27.09:963,27,0	0/0:25,0:25:66.23:0,66,3094	0/0:21,0:20:21.20:0,21,1313	1/1:22,0:21:36.97:1127,37,0	1/1:8,17:25:48.94:1210,49,0	1/1:23,0:23:54.16:1731,54,0	1/1:12,0:10:21.03:297,21,0
chr10	36330784	.	G	GAGA	163.09	PASS	AB=0.942;AC=5;AF=0.089;AN=56;BaseQRankSum=2.770;DP=555;FS=7.670;HRun=0;HaplotypeScore=238.8341;InbreedingCoeff=0.0813;MQ=37.11;MQ0=25;MQRankSum=-1.925;QD=2.43;ReadPosRankSum=0.693;VQSLOD=1.2968;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:32:41.70:0,42,499	0/0:5,0:5:10.89:0,11,69	0/0:25,0:7:21.04:0,21,289	0/0:23,0:7:14.80:0,15,214	1/1:12,0:12:1.25:3,1,0	0/0:22,0:21:4.52:0,5,164	0/0:31,0:21:26.50:0,26,190	0/0:28,0:22:15.33:0,15,112	0/0:9,0:7:10.82:0,11,84	0/0:19,0:19:24.57:0,25,276	0/0:22,0:22:17.67:0,18,160	0/0:22,0:21:56.55:0,57,943	0/0:26,0:26:34.46:0,34,355	0/1:23,0:22:26.93:27,0,66	0/0:22,0:21:3.62:0,4,216	0/0:14,0:14:13.17:0,13,92	0/0:16,0:16:10.98:0,11,75	0/1:15,4:19:99:223,0,227	0/0:24,0:19:18.40:0,18,203	0/0:18,0:17:5.94:0,6,151	0/1:13,0:12:0.33:0,0,92	0/0:12,0:11:10.32:0,10,118	0/0:28,0:28:81.05:0,81,1311	0/0:17,0:16:41.63:0,42,592	0/0:21,0:20:6.56:0,7,172	0/0:19,0:19:12.32:0,12,164	0/0:20,0:19:23.28:0,23,187	0/0:11,0:9:10.45:0,10,49
chr10	36330785	.	AGGAAGAGGAAGAG	A	12683.82	PASS	AB=0.898;AC=29;AF=0.518;AN=56;BaseQRankSum=12.185;DP=559;FS=1.712;HRun=0;HaplotypeScore=274.0896;InbreedingCoeff=-0.0428;MQ=37.07;MQ0=25;MQRankSum=-8.807;QD=31.16;ReadPosRankSum=6.399;VQSLOD=3.6573;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:32:25.82:0,26,876	0/1:4,2:6:13.74:204,0,14	0/0:25,0:7:21.07:0,21,593	0/0:23,0:7:14.73:0,15,411	0/1:11,0:11:39.06:39,0,52	1/1:16,6:21:21.23:925,21,0	0/1:24,6:20:94.18:740,0,94	0/1:30,0:24:38.93:137,0,39	0/1:9,0:7:0.62:1,0,63	1/1:14,6:20:42.60:966,43,0	0/1:14,8:22:2.58:858,0,3	0/0:23,0:22:60.19:0,60,3060	1/1:17,9:26:46.55:1234,47,0	0/1:14,9:22:13.37:1021,0,13	0/1:17,5:21:46.64:932,0,47	0/1:14,0:14:22.42:340,0,22	0/1:16,0:16:72.66:103,0,73	0/1:17,2:19:94.53:519,0,95	0/1:21,2:17:23.42:603,0,23	1/1:14,4:17:14.41:636,14,0	0/1:13,0:12:24.57:193,0,25	1/1:6,6:11:12.66:681,13,0	0/0:28,0:28:81.28:0,81,3805	0/0:18,0:17:26.71:0,27,1557	0/1:15,5:19:36.89:708,0,37	0/1:19,0:19:37.85:538,0,38	1/1:16,5:20:35.42:1210,35,0	1/1:11,0:9:2.24:95,2,0
chr10	36330786	.	GGAA	G	9086.89	PASS	AB=0.761;AC=41;AF=0.732;AN=56;BaseQRankSum=12.203;DP=558;FS=3.363;HRun=0;HaplotypeScore=203.5262;InbreedingCoeff=0.7245;MQ=36.81;MQ0=25;MQRankSum=-8.354;QD=22.55;ReadPosRankSum=0.086;VQSLOD=4.3694;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:32:27.69:0,28,595	1/1:4,2:6:11.98:138,12,0	0/0:28,0:7:21.05:0,21,368	0/0:25,0:8:18.04:0,18,316	1/1:10,1:11:0.47:1,0,0	1/1:8,14:21:42.05:534,42,0	0/1:11,19:20:21:452,0,21	1/1:20,9:23:32.83:319,33,0	1/1:9,0:7:15.68:121,16,0	1/1:7,13:20:53.11:662,53,0	1/1:11,11:22:44.88:529,45,0	0/0:22,0:21:57.17:0,57,1253	1/1:10,16:26:63.10:839,63,0	1/1:19,2:20:51.88:513,52,0	1/1:11,11:21:15.44:672,15,0	1/1:13,1:14:15.01:139,15,0	0/1:15,1:16:2.24:67,0,2	0/1:12,7:19:9.86:535,0,10	1/1:11,12:17:36.99:541,37,0	1/1:9,9:17:45.08:596,45,0	1/1:4,9:12:11.98:174,12,0	1/1:6,6:11:30.08:380,30,0	0/0:29,0:29:81.23:0,81,1749	0/0:18,0:17:31.79:0,32,665	1/1:13,7:19:44.97:522,45,0	1/1:19,0:19:48.67:462,49,0	1/1:9,11:19:57.48:700,57,0	1/1:7,4:9:19.81:192,20,0
chr10	36330794	.	AAG	A	1260.10	PASS	AB=0.937;AC=19;AF=0.339;AN=56;BaseQRankSum=9.746;DP=555;FS=24.040;HRun=0;HaplotypeScore=225.0047;InbreedingCoeff=-0.3739;MQ=36.08;MQ0=22;MQRankSum=-3.926;QD=3.94;ReadPosRankSum=5.172;VQSLOD=1.3491;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:11.87:0,12,753	0/1:4,0:4:11.32:11,0,31	0/0:33,0:8:17.97:0,18,314	0/0:32,0:9:21.02:0,21,382	0/0:9,0:9:9.63:0,10,69	0/1:18,2:19:43.77:90,0,44	0/1:21,5:16:99:103,0,101	0/0:25,0:21:29.82:0,30,243	0/1:7,0:6:14.54:15,0,150	0/1:19,0:19:36.84:37,0,127	0/1:24,0:24:99:107,0,247	0/0:21,0:20:57.17:0,57,1050	0/1:27,1:28:97.03:97,0,205	0/1:17,1:17:49.50:158,0,49	0/1:21,3:22:99:129,0,199	1/1:13,0:13:13.98:75,14,0	0/1:14,0:14:17.17:17,0,97	0/0:19,1:20:10.38:0,10,377	0/1:23,1:18:17.35:17,0,210	0/1:15,2:16:95.94:96,0,106	0/0:8,2:9:5.67:0,6,47	0/1:10,3:12:48.81:80,0,49	0/0:27,0:27:75.26:0,75,1386	0/0:20,0:19:47.68:0,48,698	0/1:17,2:18:67.87:68,0,180	0/1:19,0:19:75.48:75,0,186	0/1:16,5:20:99:190,0,153	0/1:9,0:8:57.75:58,0,95
chr10	36330806	.	A	AAG	1031.69	PASS	AB=0.867;AC=11;AF=0.196;AN=56;BaseQRankSum=7.862;DP=600;FS=5.389;HRun=0;HaplotypeScore=248.8247;InbreedingCoeff=-0.0490;MQ=36.66;MQ0=16;MQRankSum=-4.587;QD=6.92;ReadPosRankSum=-1.735;VQSLOD=2.7975;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:70.84:0,71,939	0/0:8,0:8:18.01:0,18,213	0/0:46,0:10:20.90:0,21,280	0/0:38,0:10:26.66:0,27,345	0/1:8,3:11:90.28:90,0,96	0/0:18,0:18:16.43:0,16,399	0/0:29,0:20:24.43:0,24,328	0/0:31,0:27:53.45:0,53,684	0/1:6,1:6:87.98:88,0,117	0/0:24,0:24:61.27:0,61,835	0/0:20,0:20:22.98:0,23,558	0/0:20,0:20:52.42:0,52,768	0/0:30,0:30:71.75:0,72,935	0/1:16,0:15:50.14:50,0,208	0/1:22,0:21:6.46:6,0,463	1/1:14,1:15:7.62:172,8,0	0/1:15,1:17:99:135,0,105	0/1:16,6:22:99:279,0,451	0/0:23,0:19:46.56:0,47,665	0/0:18,0:18:19.47:0,19,438	0/1:12,0:12:13.71:14,0,176	0/0:17,0:16:17.18:0,17,351	0/0:24,0:24:72.24:0,72,1059	0/0:19,0:19:5.44:0,5,564	0/0:18,0:17:27.67:0,28,482	0/1:18,1:19:99:106,0,302	0/0:25,0:24:32.76:0,33,663	0/1:2,5:7:67.22:239,0,67
chr10	36330825	.	AG	A	4418.07	PASS	AB=0.674;AC=30;AF=0.536;AN=56;BaseQRankSum=6.095;DP=610;FS=6.561;HRun=2;HaplotypeScore=213.7543;InbreedingCoeff=0.7816;MQ=45.56;MQ0=12;MQRankSum=-1.316;QD=13.23;ReadPosRankSum=5.822;VQSLOD=4.2048;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:71.93:0,72,1093	1/1:4,5:9:10.10:111,10,0	0/0:40,2:15:38.19:0,38,481	0/0:37,0:13:33.05:0,33,488	0/0:14,0:14:26.96:0,27,335	1/1:6,12:17:26.01:257,26,0	0/1:14,9:15:2.50:142,0,3	1/1:16,13:24:1.72:180,2,0	0/0:8,0:7:20.81:0,21,288	1/1:10,20:30:48.16:499,48,0	1/1:9,13:22:40.87:354,41,0	0/0:20,0:20:57.18:0,57,881	1/1:7,22:31:0.43:422,0,0	1/1:6,6:11:17.46:166,17,0	1/1:13,11:23:4.75:263,5,0	0/0:21,0:21:42:0,42,510	0/0:18,0:18:34:0,34,474	0/1:6,13:22:60.67:239,0,61	1/1:8,17:22:45.42:390,45,0	1/1:8,13:21:46.20:391,46,0	1/1:10,7:15:13.75:121,14,0	1/1:6,8:14:8.86:186,9,0	0/0:26,0:26:78.27:0,78,1239	0/0:19,0:19:56.93:0,57,868	1/1:3,13:16:27.44:264,27,0	0/0:21,0:21:60.01:0,60,813	1/1:5,16:21:53.35:433,53,0	0/0:8,0:8:21.07:0,21,312
chr10	36330827	.	AAG	A	6069.81	PASS	AB=0.618;AC=31;AF=0.554;AN=56;BaseQRankSum=6.528;DP=616;FS=3.562;HRun=0;HaplotypeScore=215.2198;InbreedingCoeff=0.9170;MQ=47.39;MQ0=12;MQRankSum=-2.922;QD=17.96;ReadPosRankSum=6.646;VQSLOD=4.6928;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:40:73.80:0,74,1381	1/1:4,5:9:15.63:159,16,0	0/0:39,3:17:15.81:0,16,533	0/0:37,0:14:32.15:0,32,518	0/0:15,0:15:29.84:0,30,367	1/1:6,12:17:31.72:347,32,0	1/1:14,9:15:21.80:234,22,0	1/1:18,13:27:24.72:285,25,0	0/0:8,0:7:20.10:0,20,325	1/1:11,20:31:63.49:681,63,0	1/1:10,13:23:42.37:437,42,0	0/0:21,0:21:57.18:0,57,1078	1/1:9,22:31:28.57:624,29,0	1/1:6,6:11:20.35:235,20,0	1/1:13,11:23:17.47:389,17,0	0/0:22,0:22:47.75:0,48,563	0/0:19,0:19:40.33:0,40,598	0/1:8,13:21:34.96:336,0,35	1/1:7,16:21:52.64:510,53,0	1/1:9,13:22:47.79:481,48,0	1/1:10,7:15:17.05:171,17,0	1/1:6,8:14:16.90:258,17,0	0/0:26,0:26:78.27:0,78,1461	0/0:19,0:19:57.14:0,57,1075	1/1:3,13:16:33.38:360,33,0	0/0:20,0:20:56.87:0,57,871	1/1:5,16:21:52.77:562,53,0	0/0:8,0:8:21.07:0,21,356
chr10	36331042	.	TTAGCCTCCAGCGTTGTATGACAGGGGTAGGGA	T	34588.24	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=14.472;DP=548;FS=18.886;HRun=0;HaplotypeScore=451.0266;InbreedingCoeff=0.8534;MQ=92.81;MQ0=0;MQRankSum=-13.660;QD=92.24;ReadPosRankSum=6.127;VQSLOD=2.4135;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,111,13961	1/1:6,5:11:9.03:758,9,0	0/0:30,0:30:78.27:0,78,5167	0/0:28,0:28:74.62:0,75,4997	1/1:8,13:20:33.11:2354,33,0	1/1:7,11:18:30.10:2526,30,0	1/1:13,6:19:6.02:505,6,0	1/1:24,0:24:6.01:55,6,0	1/1:5,10:15:21.07:1768,21,0	1/1:7,14:21:42.14:2755,42,0	1/1:9,8:17:18.06:1516,18,0	0/0:29,0:29:81.28:0,81,10705	1/1:8,17:26:51.18:4294,51,0	1/1:6,11:17:27.09:2274,27,0	1/1:5,15:20:36.12:3031,36,0	1/1:4,14:18:33.11:2779,33,0	1/1:6,6:12:9.03:758,9,0	1/1:1,3:4:6.02:505,6,0	1/1:16,5:21:15.03:616,15,0	1/1:13,10:23:27.09:1868,27,0	1/1:8,8:16:6.02:485,6,0	1/1:9,4:13:12:778,12,0	0/0:18,0:18:51.18:0,51,5386	0/0:30,0:30:87.30:0,87,11750	1/1:9,9:18:21.07:1768,21,0	1/1:9,10:19:24.04:1426,24,0	1/1:4,11:15:18.06:1516,18,0	1/1:5,2:7:3.01:253,3,0
chr10	36332666	.	AACAC	A	458.67	PASS	AB=0.936;AC=17;AF=0.340;AN=50;BaseQRankSum=3.252;DP=504;FS=17.977;HRun=0;HaplotypeScore=122.9910;InbreedingCoeff=0.4466;MQ=65.99;MQ0=17;MQRankSum=-2.770;QD=2.73;ReadPosRankSum=-0.650;VQSLOD=1.1263;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:7.13:0,7,308	0/0:5,0:5:3.01:0,3,32	./.	./.	1/1:16,2:18:2.72:44,3,0	0/0:15,1:14:9.03:0,9,173	0/0:17,0:17:6.02:0,6,104	./.	1/1:9,2:13:4.98:116,5,0	0/0:15,0:17:4.14:0,4,80	0/0:20,0:23:13.39:0,13,110	1/1:9,0:11:9.01:84,9,0	0/1:16,0:15:3.46:3,0,191	0/0:8,0:8:12.04:0,12,200	0/0:15,0:13:15.03:0,15,241	1/1:9,7:15:15.01:204,15,0	0/0:11,0:16:3.26:0,3,9	0/1:25,1:26:10:10,0,458	0/0:13,0:12:5.99:0,6,76	0/0:14,0:14:14.78:0,15,250	0/0:24,0:24:21.02:0,21,219	0/0:8,0:7:2.60:0,3,10	1/1:6,0:10:2.57:12,3,0	1/1:19,0:22:6.01:56,6,0	0/0:21,0:20:11.62:0,12,170	1/1:17,3:20:1.29:43,1,0	0/0:13,0:13:15.05:0,15,248	0/1:9,0:10:6.27:39,0,6
chr10	36333207	.	GCACCTCCAAGGTGA	G	1720.67	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.155;DP=659;FS=2.254;HRun=0;HaplotypeScore=244.8550;InbreedingCoeff=0.9967;MQ=69.57;MQ0=0;MQRankSum=-6.340;QD=63.73;ReadPosRankSum=-0.532;VQSLOD=3.1540;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,22:27:42.14:1816,42,0	0/0:9,0:9:27.09:0,27,1917	0/0:23,0:22:63.21:0,63,3343	0/0:21,0:21:63.19:0,63,3559	0/0:26,0:26:72.23:0,72,4554	0/0:28,0:28:84.29:0,84,5672	0/0:18,0:18:54.19:0,54,3774	0/0:35,0:35:99:0,102,6188	0/0:21,0:21:63.22:0,63,4237	0/0:27,0:27:78.26:0,78,4777	0/0:18,0:18:54.19:0,54,3468	0/0:28,0:28:84.29:0,84,5388	0/0:21,0:21:63.22:0,63,4190	0/0:23,0:23:66.23:0,66,4015	0/0:22,0:22:63.22:0,63,4409	0/0:25,0:25:75.26:0,75,5099	0/0:38,0:38:99:0,111,7434	0/0:24,0:24:72.25:0,72,5012	0/0:20,0:20:54.17:0,54,3414	0/0:26,0:26:75.26:0,75,5040	0/0:30,0:30:90.31:0,90,5778	0/0:28,0:28:81.26:0,81,5270	0/0:19,0:19:57.18:0,57,3463	0/0:33,0:33:93.32:0,93,6311	0/0:11,0:11:33.11:0,33,2350	0/0:25,0:25:75.26:0,75,4803	0/0:25,0:24:75.24:0,75,4886	0/0:8,0:8:24.08:0,24,1711
chr10	36335677	.	TA	T	2406.04	PASS	AB=0.733;AC=12;AF=0.214;AN=56;BaseQRankSum=11.322;DP=484;FS=23.218;HRun=8;HaplotypeScore=48.6260;InbreedingCoeff=0.8175;MQ=75.35;MQ0=1;MQRankSum=-2.185;QD=19.56;ReadPosRankSum=0.050;VQSLOD=2.0057;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:60.18:0,60,725	0/0:7,0:7:18.03:0,18,203	0/1:11,2:13:4.39:4,0,212	0/0:10,0:9:15.88:0,16,166	1/1:2,25:27:69.11:666,69,0	0/0:19,0:19:54.17:0,54,650	0/0:17,0:17:48.06:0,48,561	0/0:22,0:22:48.15:0,48,580	1/1:2,13:15:39.06:377,39,0	0/0:20,0:20:48.15:0,48,580	0/0:16,0:16:36.09:0,36,422	0/0:16,0:16:42.12:0,42,498	0/0:12,0:12:33.10:0,33,396	0/0:10,0:10:30.09:0,30,362	0/0:13,0:13:36.09:0,36,412	1/1:0,15:15:39.06:377,39,0	1/1:4,29:33:84.13:811,84,0	0/0:17,0:17:42.13:0,42,507	0/0:26,0:26:69.17:0,69,817	0/0:23,0:23:63.18:0,63,751	0/0:12,0:12:27.07:0,27,315	0/0:8,0:8:24.07:0,24,288	0/0:19,0:19:54.17:0,54,652	0/0:13,0:12:33.10:0,33,396	0/0:31,1:32:55.29:0,55,929	0/1:4,8:12:9.20:205,0,9	0/0:24,0:24:66.20:0,66,797	1/1:2,6:8:15.02:145,15,0
chr10	36336922	.	A	ACC	8441.81	PASS	AB=0.625;AC=45;AF=0.804;AN=56;BaseQRankSum=-2.486;DP=589;FS=0.000;HRun=8;HaplotypeScore=94.4499;InbreedingCoeff=0.8069;MQ=84.82;MQ0=0;MQRankSum=-3.611;QD=17.41;ReadPosRankSum=-0.733;VQSLOD=2.8337;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,0:22:12.03:138,12,0	1/1:4,0:4:3:29,3,0	0/0:19,0:19:38.35:0,38,406	0/0:20,0:21:34.90:0,35,342	1/1:1,16:19:41.59:599,42,0	1/1:2,17:20:36.12:570,36,0	1/1:7,15:24:44.64:675,45,0	1/1:21,7:31:34.03:454,34,0	1/1:5,0:26:2.10:100,2,0	1/1:6,14:21:38.59:533,39,0	1/1:2,8:11:14.96:183,15,0	0/0:31,0:31:78.16:0,78,852	1/1:6,13:19:29.59:437,30,0	1/1:2,15:20:34.30:452,34,0	1/1:4,4:23:36.08:419,36,0	1/1:3,0:26:52.28:180,52,0	1/1:6,0:31:62.38:215,62,0	1/1:3,10:15:29.07:398,29,0	1/1:10,8:18:24.02:328,24,0	1/1:7,5:14:23.57:341,24,0	1/1:14,31:47:56.08:805,56,0	1/1:7,11:19:24.08:378,24,0	0/0:10,0:10:24.04:0,24,258	0/0:23,0:23:54.04:0,54,556	1/1:10,6:18:43.91:510,44,0	1/1:7,0:20:35.31:137,35,0	1/1:4,10:17:41.06:528,41,0	0/1:8,0:20:15.47:34,0,15
chr10	36340299	.	T	TC	19849.54	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=4.733;DP=611;FS=6.967;HRun=1;HaplotypeScore=80.8648;InbreedingCoeff=0.9991;MQ=61.76;MQ0=2;MQRankSum=-2.441;QD=39.54;ReadPosRankSum=0.947;VQSLOD=5.3140;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,31:35:90.30:1349,90,0	1/1:0,8:8:24.08:359,24,0	0/0:21,0:16:48.16:0,48,623	0/0:23,0:16:45.14:0,45,558	1/1:0,17:17:42.14:629,42,0	1/1:0,29:29:75.25:1120,75,0	1/1:1,26:27:72.24:1079,72,0	1/1:2,20:22:57.19:846,57,0	1/1:0,20:20:57.19:852,57,0	1/1:0,16:16:45.15:673,45,0	1/1:0,12:12:33.11:494,33,0	0/0:20,0:20:54.18:0,54,701	1/1:0,22:22:57.19:854,57,0	1/1:0,27:27:75.25:1124,75,0	1/1:0,34:34:96.32:1439,96,0	1/1:0,18:18:51.17:764,51,0	1/1:2,33:35:84.28:1259,84,0	1/1:1,24:25:66.22:989,66,0	1/1:1,18:18:51.17:764,51,0	1/1:0,23:23:54.18:808,54,0	1/1:1,24:25:57.19:854,57,0	1/1:0,12:12:27.09:404,27,0	0/0:13,0:13:36.10:0,36,453	0/0:31,0:31:90.29:0,90,1168	1/1:0,13:13:36.12:540,36,0	1/1:0,20:20:60.20:899,60,0	1/1:1,27:28:75.25:1121,75,0	1/1:1,14:15:42.14:629,42,0
chr10	36340795	.	C	CCCCAGA	8027.74	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-6.765;DP=725;FS=0.895;HRun=0;HaplotypeScore=146.9958;InbreedingCoeff=0.9967;MQ=81.73;MQ0=0;MQRankSum=-13.644;QD=69.20;ReadPosRankSum=-0.288;VQSLOD=5.4141;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:59,0:59:99:0,160,3461	0/0:18,0:18:48.11:0,48,933	0/0:20,0:20:45.15:0,45,945	0/0:25,0:25:58.44:0,58,1200	1/1:2,18:22:36.12:1182,36,0	0/0:26,0:26:60.21:0,60,1293	0/0:27,0:27:72.25:0,72,1551	0/0:29,0:29:75.24:0,75,1511	1/1:2,15:20:48.16:1624,48,0	0/0:40,0:40:99:0,105,2127	0/0:15,0:15:39.13:0,39,860	0/0:29,0:29:78.27:0,78,1713	0/0:30,0:30:81.28:0,81,1785	0/0:30,0:30:78.25:0,78,1677	0/0:35,0:35:81.28:0,81,1773	1/1:6,15:21:51.18:1686,51,0	1/1:9,13:24:45.15:1484,45,0	0/0:22,0:22:60.21:0,60,1306	0/0:14,0:14:36.12:0,36,792	0/0:22,0:22:60.19:0,60,1266	0/0:54,0:54:99:0,147,3062	0/0:24,0:24:69.24:0,69,1520	0/0:16,0:16:45.15:0,45,992	0/0:28,0:28:81.28:0,81,1786	0/0:20,0:20:56.41:0,56,1198	1/1:7,13:21:54.12:1604,54,0	0/0:26,0:26:63.21:0,63,1347	1/1:2,5:8:15.05:448,15,0
chr10	36341548	.	AAGCAAGAAAAG	A	9319.19	PASS	AB=0.533;AC=11;AF=0.196;AN=56;BaseQRankSum=15.200;DP=698;FS=0.825;HRun=0;HaplotypeScore=219.1067;InbreedingCoeff=0.8815;MQ=79.51;MQ0=0;MQRankSum=-10.999;QD=68.02;ReadPosRankSum=2.563;VQSLOD=4.6682;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,160,8307	0/0:6,0:6:18.06:0,18,929	0/0:35,0:35:99:0,99,4098	0/0:17,0:17:48.16:0,48,2013	1/1:0,23:23:57.19:1561,57,0	0/0:16,0:16:48.16:0,48,2467	0/0:29,0:29:84.29:0,84,4461	0/0:25,0:25:75.26:0,75,3899	1/1:0,24:24:53.74:1936,54,0	0/0:21,0:21:63.21:0,63,3037	0/0:26,0:26:78.27:0,78,3941	0/0:31,0:31:93.32:0,93,4463	0/0:20,0:20:60.21:0,60,3309	0/0:24,0:24:72.25:0,72,3610	0/0:23,0:23:66.21:0,66,3521	1/1:1,25:26:60.21:2175,60,0	1/1:1,24:25:30.10:987,30,0	0/0:33,0:33:99:0,99,4821	0/0:20,0:20:57.19:0,57,2440	0/0:20,0:20:60.21:0,60,3092	0/0:32,0:32:90.29:0,90,4661	0/0:16,0:16:48.16:0,48,2255	0/0:22,0:22:66.22:0,66,3339	0/0:24,0:24:72.24:0,72,3577	0/0:28,0:28:81.26:0,81,3718	0/1:4,28:32:68.12:2116,0,68	0/0:40,0:40:99:0,117,6241	1/1:0,7:7:15.05:544,15,0
chr10	36347165	.	T	TAC	13716.14	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=-15.792;DP=756;FS=0.319;HRun=0;HaplotypeScore=87.6541;InbreedingCoeff=0.9682;MQ=61.05;MQ0=11;MQRankSum=3.013;QD=34.20;ReadPosRankSum=1.133;VQSLOD=7.0752;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:87.15:0,87,1035	1/1:0,4:4:12.04:198,12,0	0/0:55,0:24:3.96:0,4,270	0/0:36,0:21:22.57:0,23,201	0/0:21,0:21:57.17:0,57,702	1/1:8,25:34:69.24:1122,69,0	1/1:7,25:33:57.19:941,57,0	1/1:9,20:30:27.42:920,27,0	0/0:21,0:21:54.17:0,54,674	1/1:6,22:29:40.92:997,41,0	1/1:2,13:15:39.13:640,39,0	0/0:30,0:30:68.44:0,68,870	1/1:4,21:25:60.20:984,60,0	1/1:5,13:18:10.50:519,10,0	1/1:3,23:26:60.21:990,60,0	0/0:34,0:34:84.27:0,84,1049	0/0:27,0:27:69.19:0,69,835	1/1:3,23:27:63.22:1039,63,0	1/1:8,14:23:42.10:627,42,0	1/1:4,18:23:47.77:736,48,0	1/1:10,33:43:73.90:1684,74,0	1/1:4,24:28:66.23:1082,66,0	0/0:23,0:24:63.02:0,63,753	0/0:25,0:25:63.20:0,63,788	1/1:3,16:19:36.12:594,36,0	0/0:31,0:31:59.40:0,59,1010	1/1:8,16:24:39.13:642,39,0	0/0:13,0:13:36.12:0,36,450
chr10	36349651	.	ATGTC	A	4490.38	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=12.207;DP=650;FS=1.576;HRun=0;HaplotypeScore=116.5197;InbreedingCoeff=0.7310;MQ=75.60;MQ0=15;MQRankSum=-1.945;QD=13.02;ReadPosRankSum=-0.963;VQSLOD=4.0915;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:39:99:0,102,808	1/1:10,0:9:21.85:191,22,0	0/0:39,0:24:45.46:0,45,510	0/0:55,0:27:45.70:0,46,487	0/0:13,0:13:35.66:0,36,275	1/1:16,0:16:26.64:319,27,0	1/1:1,0:34:2.80:13,3,0	1/1:1,0:26:68.87:571,69,0	0/0:16,0:16:38.67:0,39,303	1/1:25,0:25:72.01:656,72,0	1/1:18,0:19:47.59:366,48,0	0/0:19,0:17:50.90:0,51,414	1/1:1,20:22:9.03:158,9,0	0/1:23,0:23:29.59:404,0,30	1/1:0,25:26:14.38:125,14,0	0/0:32,0:32:57.73:0,58,562	0/0:14,0:14:27.57:0,28,247	1/1:0,18:18:3.01:59,3,0	1/1:22,0:20:30.10:425,30,0	1/1:12,0:12:35.83:282,36,0	0/1:30,0:28:99:392,0,172	1/1:0,0:20:34.97:199,35,0	0/0:16,0:16:29.93:0,30,241	0/0:27,0:27:74.81:0,75,749	1/1:13,0:13:35.91:292,36,0	0/0:19,0:19:53.79:0,54,462	0/1:29,0:28:11.98:39,0,12	0/0:15,0:15:35.99:0,36,280
chr10	36349653	.	GTCTCTCTC	G	270.81	PASS	AB=0.921;AC=8;AF=0.182;AN=44;BaseQRankSum=1.892;DP=706;FS=3.515;HRun=0;HaplotypeScore=178.2565;InbreedingCoeff=0.3275;MQ=72.16;MQ0=19;MQRankSum=-2.109;QD=2.53;ReadPosRankSum=1.403;VQSLOD=2.4959;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:41:5.96:0,6,45	./.	./.	./.	./.	0/0:17,0:16:6.02:0,6,140	0/0:34,0:34:6.02:0,6,159	0/0:31,0:31:11.66:0,12,76	1/1:17,0:17:0.82:2,1,0	0/0:27,0:27:0:0,0,0	0/0:21,0:21:0:0,0,0	0/0:23,0:21:11.99:0,12,158	0/1:22,0:22:8.60:9,0,27	0/0:25,0:25:12.50:0,12,339	0/0:30,0:29:2.84:0,3,18	0/1:26,5:32:10.86:227,0,11	1/1:14,1:15:3.01:74,3,0	0/0:19,0:19:5.97:0,6,133	0/0:29,0:27:9.03:0,9,316	0/0:18,0:18:3.48:0,3,119	0/0:36,0:33:21.07:0,21,792	0/0:20,0:20:0:0,0,0	./.	0/0:26,0:27:22.01:0,22,515	0/0:16,0:16:9.03:0,9,181	1/1:21,0:21:4.96:65,5,0	0/0:32,0:30:8.62:0,9,270	./.
chr10	36349655	.	C	CTT	4252.61	PASS	AB=0.542;AC=27;AF=0.482;AN=56;BaseQRankSum=13.086;DP=752;FS=0.000;HRun=1;HaplotypeScore=135.2605;InbreedingCoeff=0.9030;MQ=68.74;MQ0=27;MQRankSum=-1.815;QD=11.59;ReadPosRankSum=0.767;VQSLOD=1.3898;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:43:99:0,102,802	1/1:13,0:12:24.01:214,24,0	0/0:37,0:22:43.39:0,43,526	0/0:53,0:25:25.64:0,26,465	0/0:14,0:14:32.82:0,33,259	1/1:22,0:20:21.49:346,21,0	0/0:35,0:35:5.45:0,5,38	1/1:40,0:40:55.98:553,56,0	0/0:16,0:16:32.85:0,33,273	1/1:28,0:28:73.95:671,74,0	1/1:22,0:21:35.66:296,36,0	0/0:25,0:23:50.94:0,51,423	1/1:27,0:27:9.06:44,9,0	1/1:26,0:26:54.23:455,54,0	1/1:31,0:30:12.29:77,12,0	0/0:32,0:32:63.12:0,63,629	0/0:15,0:15:29.85:0,30,230	0/0:21,0:21:3.03:0,3,20	1/1:30,0:27:41.71:412,42,0	1/1:20,0:20:12.57:254,13,0	1/1:39,0:35:37.76:494,38,0	1/1:20,0:20:29.56:193,30,0	0/0:23,0:22:32.21:0,32,256	0/0:29,0:28:55.92:0,56,588	1/1:17,0:17:12.18:245,12,0	0/0:21,0:21:51.45:0,51,414	0/1:5,26:30:0.18:0,0,30	0/0:20,0:16:38.52:0,39,293
chr10	36350368	.	AG	A	13572.25	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=16.708;DP=683;FS=8.242;HRun=3;HaplotypeScore=95.3988;InbreedingCoeff=0.9970;MQ=82.95;MQ0=0;MQRankSum=-4.829;QD=33.68;ReadPosRankSum=-0.361;VQSLOD=4.4643;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,105,1512	1/1:0,13:13:36.11:446,36,0	0/0:16,0:16:48.14:0,48,672	0/0:25,0:25:72.22:0,72,997	0/0:17,0:17:48.16:0,48,690	1/1:1,17:18:39.12:484,39,0	1/1:3,28:31:51.41:937,51,0	1/1:2,31:33:90.26:1091,90,0	0/0:20,0:20:60.18:0,60,830	1/1:1,27:28:81.24:992,81,0	1/1:0,9:9:24.08:298,24,0	0/0:24,0:24:72.24:0,72,1037	1/1:0,23:23:69.22:855,69,0	1/1:0,34:34:96.30:1190,96,0	1/1:1,18:19:48.15:595,48,0	0/0:15,0:15:45.15:0,45,648	0/0:39,0:39:99:0,114,1623	1/1:0,46:46:99:1599,129,0	1/1:1,20:21:60.18:737,60,0	1/1:1,10:11:27.08:335,27,0	1/1:2,52:54:99:1896,153,0	1/1:0,16:16:42.13:521,42,0	0/0:8,0:8:24.08:0,24,344	0/0:42,0:42:99:0,123,1756	1/1:1,25:26:69.22:855,69,0	0/0:31,1:32:56.11:0,56,1248	1/1:0,21:21:60.19:744,60,0	0/0:5,0:5:15.05:0,15,216
chr10	36350666	.	CT	C	20322.88	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-5.216;DP=665;FS=9.413;HRun=4;HaplotypeScore=64.1618;InbreedingCoeff=0.9941;MQ=72.60;MQ0=1;MQRankSum=-6.617;QD=31.66;ReadPosRankSum=3.266;VQSLOD=5.0856;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,40:41:99:1331,111,0	1/1:0,10:10:30.09:360,30,0	0/0:10,0:9:21.07:0,21,285	0/0:12,1:13:23.83:0,24,317	1/1:1,22:23:63.16:740,63,0	1/1:0,28:28:66.20:790,66,0	1/1:0,21:21:54.17:648,54,0	1/1:4,37:41:99:1273,108,0	1/1:1,19:20:51.16:611,51,0	1/1:1,33:34:99:1153,99,0	1/1:0,19:19:51.11:596,51,0	1/1:0,21:21:63.19:755,63,0	1/1:1,26:27:72.22:863,72,0	1/1:1,13:14:36.11:432,36,0	1/1:0,33:33:84.26:1007,84,0	1/1:0,20:20:51.16:612,51,0	1/1:0,39:39:99:1223,102,0	1/1:0,19:19:51.16:611,51,0	1/1:2,10:12:30.06:329,30,0	1/1:1,17:18:50.95:544,51,0	1/1:2,33:35:93.28:1115,93,0	1/1:1,24:25:69.17:811,69,0	1/1:1,18:19:48.15:576,48,0	1/1:0,21:21:51.16:612,51,0	1/1:0,33:33:96.29:1151,96,0	1/1:0,31:31:93.27:1104,93,0	1/1:1,28:29:68.92:826,69,0	1/1:1,8:9:21.06:251,21,0
chr10	36351283	.	CAGAG	C	1281.36	PASS	AC=6;AF=0.111;AN=54;BaseQRankSum=-4.660;DP=693;FS=19.100;HRun=0;HaplotypeScore=203.6106;InbreedingCoeff=0.8741;MQ=61.12;MQ0=8;MQRankSum=4.040;QD=14.08;ReadPosRankSum=0.277;VQSLOD=1.6648;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:14.87:0,15,109	0/0:9,0:9:8.75:0,9,102	0/0:39,0:33:29.65:0,30,412	0/0:29,0:26:37.22:0,37,354	0/0:35,0:34:26.46:0,26,254	0/0:26,0:26:20.45:0,20,161	0/0:30,0:30:20.99:0,21,197	0/0:42,0:36:59.53:0,60,445	0/0:29,0:29:35.51:0,36,361	0/0:31,0:29:59.74:0,60,594	0/0:20,0:19:8.99:0,9,75	1/1:5,29:34:36.12:617,36,0	0/0:19,0:19:14.88:0,15,136	0/0:25,0:25:20.40:0,20,160	0/0:21,0:21:8.98:0,9,72	0/0:28,0:28:23.66:0,24,159	0/0:22,0:22:20.46:0,20,136	0/0:12,0:12:26.72:0,27,186	0/0:15,0:15:26.84:0,27,225	0/0:20,0:18:20.96:0,21,172	./.	0/0:25,0:24:8.99:0,9,75	1/1:1,20:20:14.73:186,15,0	1/1:2,34:35:36.12:617,36,0	0/0:22,0:21:20.94:0,21,189	0/0:35,0:33:90.04:0,90,1117	0/0:22,0:22:8.97:0,9,96	0/0:11,0:10:19.79:0,20,174
chr10	36351307	.	G	GAGAGAGAGAGAGAT	6020.89	PASS	AB=0.949;AC=35;AF=0.625;AN=56;BaseQRankSum=7.724;DP=725;FS=11.435;HRun=0;HaplotypeScore=282.4364;InbreedingCoeff=0.2013;MQ=47.10;MQ0=11;MQRankSum=-5.041;QD=10.43;ReadPosRankSum=-1.364;VQSLOD=1.9339;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:21:12.86:151,13,0	1/1:1,7:14:3.85:213,4,0	0/0:19,0:12:28.40:0,28,360	0/0:19,0:16:35.06:0,35,456	0/1:33,0:32:28.50:28,0,387	1/1:7,0:31:3.48:110,3,0	1/1:28,0:28:3.22:400,3,0	0/1:45,0:38:99:735,0,108	0/1:33,0:33:99:140,0,716	1/1:33,0:31:78.10:1011,78,0	1/1:20,0:19:6.04:76,6,0	0/0:34,0:34:48.15:0,48,1709	1/1:4,13:27:9.03:291,9,0	1/1:25,0:25:24.90:341,25,0	0/1:4,12:27:0:0,0,0	0/1:30,0:30:99:172,0,397	0/1:24,0:24:99:231,0,348	1/1:11,0:11:23.97:486,24,0	0/1:22,0:20:99:381,0,194	0/0:4,0:14:1.94:0,2,6	1/1:17,0:17:2.96:24,3,0	1/1:24,0:23:5.97:99,6,0	0/0:20,0:19:23.76:0,24,707	0/0:40,0:39:54.19:0,54,1924	1/1:16,0:26:17.42:295,17,0	0/1:32,0:30:99:442,0,1498	1/1:3,18:37:5.88:271,6,0	0/1:14,0:13:99:122,0,762
chr10	36351315	.	G	GAT	269.60	PASS	AB=0.974;AC=9;AF=0.161;AN=56;BaseQRankSum=4.796;DP=681;FS=2.748;HRun=0;HaplotypeScore=199.2059;InbreedingCoeff=0.0258;MQ=46.29;MQ0=13;MQRankSum=-1.333;QD=1.54;ReadPosRankSum=-1.988;VQSLOD=1.9228;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:22:22.18:220,22,0	0/0:11,0:11:2.76:0,3,118	0/0:13,0:4:12.04:0,12,182	0/0:17,0:14:20.90:0,21,321	0/0:31,1:31:20.36:0,20,276	0/1:22,1:23:7.77:8,0,83	0/0:28,2:30:29.57:0,30,381	0/0:47,0:40:93.07:0,93,1270	0/0:30,2:32:50.42:0,50,714	0/0:36,0:34:58.72:0,59,972	0/0:20,0:19:8.83:0,9,137	0/0:35,0:35:60.20:0,60,847	0/0:19,0:19:10.54:0,11,85	0/0:27,0:27:32.86:0,33,418	0/0:22,1:23:9.03:0,9,136	0/0:30,0:29:28.79:0,29,324	0/1:23,0:23:38.48:38,0,438	0/1:12,0:12:14.01:14,0,101	0/1:18,1:15:43.52:44,0,380	0/1:12,0:11:11.45:11,0,80	0/0:16,0:16:8.73:0,9,137	0/0:21,1:21:2.83:0,3,42	0/0:20,0:19:33.09:0,33,452	0/0:36,0:35:60.20:0,60,851	0/0:26,1:25:14.52:0,15,153	0/1:32,2:32:32.34:32,0,998	0/1:28,1:29:43.08:43,0,99	0/0:13,0:12:33.04:0,33,475
chr10	36351338	.	AGACAGACT	A	4282.76	PASS	AB=1.000;AC=24;AF=0.429;AN=56;BaseQRankSum=-6.173;DP=653;FS=12.763;HRun=0;HaplotypeScore=203.2470;InbreedingCoeff=0.4385;MQ=57.48;MQ0=7;MQRankSum=1.346;QD=12.82;ReadPosRankSum=-4.067;VQSLOD=1.5374;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:16.96:0,17,269	0/1:11,0:11:37.96:38,0,74	0/0:25,0:18:45.74:0,46,574	0/0:19,0:17:40.68:0,41,504	0/0:26,0:25:35.80:0,36,651	1/1:30,0:30:35.95:298,36,0	0/1:30,0:30:9.55:553,0,10	1/1:20,14:33:93.01:940,93,0	0/0:35,0:35:71.97:0,72,1258	0/1:30,0:29:99:459,0,203	1/1:14,0:14:14.98:125,15,0	0/0:32,0:32:78.13:0,78,1155	0/1:22,0:22:30.28:124,0,30	1/1:28,0:28:21.10:398,21,0	1/1:24,0:24:20.94:169,21,0	0/0:27,0:26:38.91:0,39,660	0/0:24,0:24:52.07:0,52,602	1/1:7,0:7:14.87:122,15,0	0/1:7,0:5:48.54:116,0,49	0/1:14,0:14:28.24:171,0,28	1/1:21,0:21:32.91:264,33,0	1/1:16,0:16:20.96:226,21,0	0/0:19,0:18:39.02:0,39,563	0/0:35,0:34:69.17:0,69,1298	0/1:21,0:19:4.12:156,0,4	0/0:35,0:33:99:0,99,2584	0/1:25,0:25:55.54:125,0,56	0/0:15,0:14:39.05:0,39,1002
chr10	36353905	.	GC	G	4846.89	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=11.573;DP=653;FS=6.411;HRun=7;HaplotypeScore=65.7435;InbreedingCoeff=0.9997;MQ=80.37;MQ0=0;MQRankSum=-1.965;QD=27.08;ReadPosRankSum=1.463;VQSLOD=5.6907;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,129,1589	0/0:10,0:10:30.10:0,30,375	0/0:20,0:20:42.11:0,42,495	0/0:17,0:17:34.06:0,34,450	1/1:2,13:15:42.09:428,42,0	0/0:19,0:19:48.15:0,48,604	0/0:31,0:31:84.24:0,84,1031	0/0:18,0:18:48.15:0,48,594	1/1:1,17:18:45.10:459,45,0	0/0:28,0:28:75.23:0,75,932	0/0:18,0:18:54.16:0,54,667	1/1:2,20:22:60.13:609,60,0	0/0:35,0:35:93.28:0,93,1156	0/0:22,0:22:63.20:0,63,789	0/0:32,0:32:90.28:0,90,1119	1/1:4,25:29:69.15:704,69,0	1/1:1,12:13:36.08:367,36,0	0/0:36,0:36:99:0,102,1278	0/0:26,0:26:66.21:0,66,830	0/0:17,0:17:48.14:0,48,592	0/0:28,0:28:75.23:0,75,931	0/0:19,0:19:51.16:0,51,642	1/1:0,15:15:36.08:367,36,0	1/1:0,30:30:87.20:888,87,0	0/0:22,0:22:63.19:0,63,779	1/1:1,25:26:72.12:719,72,0	0/0:28,0:28:81.26:0,81,1017	1/1:0,11:11:30.07:306,30,0
chr10	36354049	.	TGA	T	5268.25	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=12.034;DP=683;FS=0.368;HRun=0;HaplotypeScore=82.3486;InbreedingCoeff=0.9870;MQ=77.94;MQ0=0;MQRankSum=-3.705;QD=40.84;ReadPosRankSum=4.119;VQSLOD=6.3113;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,123,2376	0/0:11,0:11:33.11:0,33,637	0/0:12,0:12:35.95:0,36,636	0/0:18,0:18:45.15:0,45,808	1/1:0,13:13:36.09:526,36,0	0/0:17,0:17:51.17:0,51,985	0/0:42,0:42:99:0,126,2434	0/0:22,0:22:60.21:0,60,1156	1/1:0,25:25:60.20:919,60,0	0/0:22,0:22:63.22:0,63,1204	0/0:15,0:15:45.15:0,45,859	0/0:41,0:41:99:0,123,2366	0/0:33,0:33:99:0,99,1869	0/0:33,0:33:99:0,99,1892	0/0:34,0:34:96.33:0,96,1853	1/1:0,30:30:90.31:1379,90,0	1/1:0,31:31:81.28:1241,81,0	0/0:24,0:24:72.25:0,72,1391	0/0:21,0:21:63.18:0,63,1156	0/0:22,0:22:63.21:0,63,1184	0/0:47,0:47:99:0,138,2608	0/0:17,0:17:48.16:0,48,918	0/0:17,0:17:51.17:0,51,982	0/0:28,0:28:81.28:0,81,1556	0/0:15,0:15:39.12:0,39,715	1/1:2,25:27:20.25:1066,20,0	0/0:22,0:22:66.23:0,66,1274	1/1:0,3:3:9.03:138,9,0
chr10	36356203	.	C	CA	9008.09	PASS	AB=0.643;AC=31;AF=0.554;AN=56;BaseQRankSum=-17.108;DP=649;FS=3.705;HRun=9;HaplotypeScore=88.5249;InbreedingCoeff=0.9268;MQ=65.53;MQ0=0;MQRankSum=-0.851;QD=24.35;ReadPosRankSum=-0.772;VQSLOD=5.0792;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,117,1001	0/1:4,5:9:11.01:118,0,11	0/0:15,0:15:32.08:0,32,251	0/0:13,0:14:10.82:0,11,190	0/0:25,0:25:68.98:0,69,599	1/1:1,24:25:69.19:763,69,0	1/1:5,16:21:51.13:556,51,0	1/1:5,22:27:57.11:612,57,0	0/0:16,0:16:38.97:0,39,338	1/1:6,19:25:51.14:564,51,0	1/1:5,25:30:69.15:750,69,0	0/0:16,0:16:38.99:0,39,339	1/1:2,16:18:39.11:431,39,0	1/1:4,17:21:25.08:504,25,0	1/1:1,20:21:51.14:564,51,0	0/0:22,0:22:59.97:0,60,517	0/0:29,0:29:86.94:0,87,747	1/1:6,20:26:60.12:650,60,0	1/1:5,19:24:36.65:593,37,0	1/1:0,17:19:55.34:586,55,0	1/1:7,24:31:72.14:782,72,0	1/1:7,20:27:48.13:531,48,0	0/0:19,0:19:53.96:0,54,465	0/0:26,0:26:74.98:0,75,651	1/1:6,18:24:45.12:498,45,0	0/0:24,0:25:59:0,59,501	1/1:4,18:22:25.09:505,25,0	0/0:22,0:23:31.33:0,31,328
chr10	36357903	.	TCTCTCC	T	2934.64	PASS	AB=1.000;AC=29;AF=0.537;AN=54;BaseQRankSum=0.898;DP=580;FS=37.492;HRun=0;HaplotypeScore=111.8634;InbreedingCoeff=0.3358;MQ=54.66;MQ0=15;MQRankSum=-4.022;QD=7.37;ReadPosRankSum=5.264;VQSLOD=0.1569;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:58:6.48:60,6,0	0/0:7,0:6:6.02:0,6,90	./.	0/0:36,0:12:5.91:0,6,79	1/1:5,8:12:8.87:105,9,0	0/1:24,0:24:18.54:19,0,76	0/0:13,0:12:2.94:0,3,127	0/0:30,0:28:6.45:0,6,135	1/1:9,16:25:21.07:425,21,0	0/0:13,0:13:4.01:0,4,28	0/0:10,0:10:5.09:0,5,23	1/1:6,14:19:12.04:250,12,0	0/1:11,0:11:4.06:4,0,96	1/1:12,0:12:8.95:79,9,0	0/1:15,0:15:0.07:0,0,0	1/1:9,20:28:39.13:723,39,0	1/1:7,15:22:5.54:124,6,0	0/0:14,0:12:4.69:0,5,25	0/0:21,0:20:16:0,16,147	0/1:12,0:12:25.80:26,0,40	0/1:36,0:35:37.56:38,0,63	0/1:15,0:15:12.19:12,0,70	1/1:7,12:19:14.90:255,15,0	1/1:11,17:28:4.80:77,5,0	0/1:27,0:27:43.41:43,0,74	1/1:9,15:23:41.88:749,42,0	0/0:11,0:11:17:0,17,144	1/1:4,3:7:6.02:121,6,0
chr10	36366797	.	AACAC	A	106.24	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=4.002;DP=479;FS=2.068;HRun=0;HaplotypeScore=192.8859;InbreedingCoeff=0.3338;MQ=35.38;MQ0=2;MQRankSum=-3.102;QD=3.54;ReadPosRankSum=-2.528;VQSLOD=2.4021;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:2,13:14:12:183,12,0	0/0:6,0:6:12:0,12,260	0/0:9,0:7:24.07:0,24,581	0/0:12,0:3:9.03:0,9,220	0/0:20,0:20:2.12:0,2,48	0/0:23,0:23:32.06:0,32,937	0/0:26,0:25:31.05:0,31,670	0/0:23,0:23:52.48:0,52,1083	0/0:8,0:8:21.07:0,21,458	0/0:25,0:25:37.36:0,37,941	0/0:17,0:17:5.66:0,6,92	0/0:15,0:14:24.38:0,24,528	0/0:17,0:16:22.45:0,22,472	0/0:22,0:22:28.24:0,28,494	0/0:12,0:12:10.55:0,11,218	0/0:13,0:12:27.06:0,27,632	0/1:15,0:14:21.81:22,0,269	0/0:2,0:2:3.01:0,3,80	0/0:22,0:21:63.18:0,63,1186	0/0:21,0:21:11.53:0,12,315	0/0:19,0:19:30.01:0,30,640	0/0:27,0:26:12.97:0,13,189	0/0:19,0:19:17.49:0,17,407	0/0:19,0:19:3.48:0,3,81	0/0:28,0:28:13.30:0,13,468	0/0:23,0:23:58.17:0,58,1173	0/0:16,0:16:29.46:0,29,570	0/0:5,0:4:6.45:0,6,101
chr10	36366821	.	ATAG	A	471.53	PASS	AB=0.975;AC=10;AF=0.179;AN=56;BaseQRankSum=6.133;DP=628;FS=19.039;HRun=0;HaplotypeScore=237.9889;InbreedingCoeff=0.0436;MQ=36.70;MQ0=10;MQRankSum=-4.724;QD=2.18;ReadPosRankSum=-0.035;VQSLOD=1.2072;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:19:13.23:0,13,257	0/0:7,0:7:8.06:0,8,145	0/0:25,0:12:35.47:0,35,745	0/0:28,0:9:27.09:0,27,572	0/0:30,0:30:4.41:0,4,140	0/0:29,0:29:23.53:0,24,523	0/0:21,0:20:8:0,8,148	0/1:27,0:27:52.63:53,0,686	0/0:17,0:17:19.49:0,19,281	0/1:33,3:36:99:369,0,681	0/0:17,2:19:8.25:0,8,60	0/0:14,0:13:3.48:0,3,67	0/1:17,0:17:2.73:3,0,84	0/0:27,0:27:24.21:0,24,332	0/0:18,0:18:14.13:0,14,190	0/0:21,0:20:4.93:0,5,74	0/1:18,0:17:99:121,0,225	0/1:10,0:9:5.03:5,0,167	0/0:21,0:20:8.14:0,8,529	0/1:21,2:23:1.31:1,0,2	0/0:29,0:28:30.63:0,31,616	0/0:34,0:32:7.83:0,8,332	0/0:21,1:21:3.29:0,3,68	0/1:22,1:22:0.22:0,0,0	1/1:28,2:30:3.87:30,4,0	0/1:32,0:32:8.80:9,0,932	0/0:22,0:20:10.11:0,10,331	0/0:6,0:5:6.64:0,7,134
chr10	36366822	.	TAG	T	222.94	PASS	AB=0.990;AC=8;AF=0.143;AN=56;BaseQRankSum=7.809;DP=624;FS=30.086;HRun=0;HaplotypeScore=234.4908;InbreedingCoeff=0.0028;MQ=36.79;MQ0=10;MQRankSum=-5.907;QD=1.22;ReadPosRankSum=1.726;VQSLOD=1.1441;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,1:19:11.79:0,12,166	0/0:7,0:7:6.02:0,6,95	0/0:24,0:12:35.84:0,36,550	0/0:28,0:9:26.82:0,27,343	0/0:30,1:31:5.43:0,5,99	0/1:28,0:29:7.98:8,0,336	0/0:19,2:20:8.23:0,8,95	0/0:23,0:27:22.96:0,23,513	0/1:17,0:17:10.18:10,0,167	0/1:34,1:35:99:203,0,437	0/0:19,0:19:7.07:0,7,50	0/0:14,0:13:4.62:0,5,40	0/0:14,3:17:11.54:0,12,71	0/0:25,2:27:9.49:0,9,236	0/0:17,1:18:17.21:0,17,159	0/0:21,0:20:0.56:0,1,33	0/1:18,0:17:21.16:21,0,158	0/0:10,0:9:5.80:0,6,141	0/0:18,0:19:23.25:0,23,383	1/1:23,0:23:0.66:5,1,0	0/0:29,0:28:31.66:0,32,432	0/0:34,0:32:18.52:0,19,256	0/0:22,0:21:3.13:0,3,36	0/0:22,1:22:0.34:0,0,1	0/1:29,0:29:3.85:22,0,4	0/1:31,0:31:72.35:72,0,496	0/0:22,0:20:22.54:0,23,246	0/0:6,0:5:7.37:0,7,80
chr10	36366824	.	GCACA	G	1117.99	PASS	AB=0.934;AC=24;AF=0.480;AN=50;BaseQRankSum=-5.846;DP=633;FS=15.397;HRun=0;HaplotypeScore=243.5357;InbreedingCoeff=0.2943;MQ=36.72;MQ0=11;MQRankSum=2.548;QD=3.17;ReadPosRankSum=-0.015;VQSLOD=1.2001;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:20:1.73:0,2,8	./.	./.	./.	0/0:33,0:33:2.36:0,2,6	1/1:26,2:29:12.28:143,12,0	0/1:20,0:20:1.10:1,0,8	0/0:26,0:26:1.82:0,2,5	0/0:18,0:18:8.91:0,9,61	0/1:35,1:36:31.11:31,0,35	0/1:19,1:20:7.89:41,0,8	0/0:16,0:15:0.41:0,0,2	1/1:12,4:16:6.02:93,6,0	1/1:18,5:24:10.67:276,11,0	1/1:14,4:18:11.39:186,11,0	1/1:21,0:20:0.58:2,1,0	0/0:20,0:19:1.31:0,1,8	1/1:3,5:9:15:188,15,0	1/1:17,0:18:7.25:59,7,0	0/1:21,0:22:0.33:0,0,0	1/1:24,7:30:3.01:47,3,0	0/1:31,2:32:5.57:51,0,6	0/0:23,0:22:0.42:0,0,2	0/0:25,0:24:4.55:0,5,29	1/1:28,1:29:1.84:46,2,0	0/0:33,0:33:20.07:0,20,139	0/1:18,0:20:6.23:91,0,6	0/0:6,0:5:3.63:0,4,10
chr10	36366947	.	CTT	C	2528.97	PASS	AB=0.593;AC=16;AF=0.286;AN=56;BaseQRankSum=1.295;DP=606;FS=6.065;HRun=15;HaplotypeScore=111.8809;InbreedingCoeff=0.7469;MQ=73.50;MQ0=1;MQRankSum=-3.016;QD=13.60;ReadPosRankSum=7.134;VQSLOD=2.4477;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,22:30:53.77:467,54,0	0/0:4,0:10:12.01:0,12,118	0/0:31,0:25:3:0,3,280	0/0:27,0:22:3.17:0,3,206	1/1:3,25:29:50.74:448,51,0	0/0:5,0:28:38.99:0,39,372	0/0:7,0:19:24.02:0,24,225	0/0:15,0:23:45.04:0,45,476	1/1:5,16:22:43.62:394,44,0	0/0:10,0:29:62.91:0,63,588	0/0:21,0:26:62.87:0,63,579	0/1:3,2:12:33.54:34,0,45	0/0:10,0:16:38.99:0,39,365	0/0:19,0:23:59.99:0,60,591	0/0:9,0:17:42.02:0,42,407	1/1:2,15:17:35.96:317,36,0	1/1:3,16:20:32.67:276,33,0	0/0:9,0:25:45.05:0,45,443	0/0:10,0:23:48.01:0,48,456	0/0:13,0:23:59.99:0,60,591	0/0:8,0:16:27.18:0,27,274	0/0:14,0:19:47.99:0,48,501	0/0:7,2:22:1.57:0,2,52	0/1:6,1:16:7.43:7,0,25	0/0:6,0:27:39.90:0,40,389	1/1:5,17:22:53.81:468,54,0	0/0:4,0:11:17.99:0,18,178	1/1:5,11:18:38.39:314,38,0
chr10	36368762	.	A	ATGCGTGCGTGCG	8016.49	PASS	AC=48;AF=0.923;AN=52;BaseQRankSum=-3.002;DP=531;FS=0.000;HRun=0;HaplotypeScore=150.1974;InbreedingCoeff=0.3831;MQ=70.53;MQ0=3;MQRankSum=-3.699;QD=17.43;ReadPosRankSum=1.786;VQSLOD=3.5144;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:14:2.99:24,3,0	1/1:5,0:5:2.99:24,3,0	0/0:20,0:16:26.25:0,26,393	0/0:33,0:30:14.92:0,15,385	1/1:8,0:8:1.17:3,1,0	1/1:8,6:14:15.05:808,15,0	1/1:14,10:30:6.02:284,6,0	1/1:22,0:22:12.04:410,12,0	1/1:10,0:10:3.90:157,4,0	1/1:9,6:15:21.03:718,21,0	1/1:7,4:13:3.01:176,3,0	1/1:9,0:31:3.01:156,3,0	1/1:7,5:16:9.03:463,9,0	1/1:10,7:21:6.02:351,6,0	1/1:11,7:23:3.01:176,3,0	./.	1/1:14,1:33:3.01:157,3,0	1/1:13,8:23:11.99:704,12,0	1/1:19,1:22:12.02:419,12,0	1/1:7,5:14:6.02:351,6,0	1/1:37,0:37:23.15:432,23,0	1/1:6,3:13:3.01:176,3,0	./.	1/1:22,0:22:11.07:365,11,0	1/1:6,10:18:15.05:803,15,0	1/1:15,0:15:18.06:510,18,0	1/1:14,3:19:3.01:175,3,0	1/1:14,0:14:5.97:176,6,0
chr10	36372584	.	A	AGTGT	2602.62	PASS	AB=0.838;AC=31;AF=0.554;AN=56;BaseQRankSum=0.715;DP=693;FS=9.565;HRun=0;HaplotypeScore=196.7709;InbreedingCoeff=0.4551;MQ=72.29;MQ0=5;MQRankSum=-3.454;QD=5.55;ReadPosRankSum=-2.306;VQSLOD=1.3226;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:35,2:37:24.08:348,24,0	1/1:11,2:12:12.44:208,12,0	0/0:37,0:25:52.52:0,53,685	0/0:43,0:31:13.21:0,13,489	0/0:12,0:12:12.03:0,12,128	1/1:9,12:21:3.01:71,3,0	0/1:36,6:42:24.97:307,0,25	1/1:29,0:28:18.90:283,19,0	0/0:24,0:24:23.45:0,23,214	1/1:12,6:20:18.31:254,18,0	0/1:6,0:8:0.01:0,0,0	0/1:18,0:18:0.19:0,0,336	0/1:8,10:22:12.14:152,0,12	0/1:25,1:26:1.52:6,0,2	1/1:16,13:33:10.10:139,10,0	0/0:22,0:22:11:0,11,307	0/0:34,0:34:22.77:0,23,412	1/1:20,1:25:33.32:296,33,0	1/1:26,0:24:14.87:135,15,0	1/1:7,0:8:0.42:1,0,0	1/1:53,0:51:23.90:232,24,0	0/1:7,1:15:2.92:18,0,3	0/0:14,0:14:6.01:0,6,72	0/0:38,0:36:30.01:0,30,397	0/1:10,8:18:1.87:66,0,2	0/1:22,0:22:6.22:6,0,117	1/1:21,1:23:15.33:252,15,0	0/1:8,0:8:10.16:10,0,84
chr10	36372594	.	TGC	T	4479.90	PASS	AB=0.987;AC=34;AF=0.607;AN=56;BaseQRankSum=-8.557;DP=677;FS=0.403;HRun=0;HaplotypeScore=145.2292;InbreedingCoeff=-0.2030;MQ=65.39;MQ0=11;MQRankSum=1.729;QD=7.64;ReadPosRankSum=-5.459;VQSLOD=3.3325;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:38,0:38:32.88:257,33,0	0/1:14,0:13:9.69:99,0,10	0/0:35,0:19:45.61:0,46,371	0/1:45,0:27:28.37:28,0,218	0/1:11,0:11:54.01:54,0,58	0/1:19,0:18:0.73:61,0,1	1/1:37,1:38:2.73:404,3,0	1/1:21,0:20:31.28:386,31,0	0/1:23,1:24:72.21:236,0,72	1/1:17,0:17:18.63:233,19,0	1/1:9,0:8:8.50:74,9,0	0/0:17,0:17:29.83:0,30,279	0/1:22,0:22:9.76:81,0,10	0/1:23,0:23:8.88:120,0,9	1/1:36,0:36:14.56:130,15,0	0/1:21,2:23:99:239,0,119	0/1:34,4:38:99:484,0,152	0/1:24,0:24:86.23:158,0,86	0/1:22,0:20:15.61:234,0,16	1/1:6,0:6:2.98:23,3,0	0/1:60,0:57:8.97:415,0,9	0/1:12,0:12:12.91:32,0,13	0/1:15,0:15:16.39:16,0,21	0/0:39,0:35:8.58:0,9,186	1/1:17,0:17:19.10:165,19,0	1/1:2,19:21:15.30:397,15,0	0/1:21,0:20:28.84:29,0,98	0/1:10,0:10:24.32:124,0,24
chr10	36372596	.	C	CGTGTGTGTGTGTGTGTGT	2825.44	PASS	AB=1.000;AC=34;AF=0.654;AN=52;BaseQRankSum=-8.114;DP=693;FS=13.080;HRun=0;HaplotypeScore=313.7892;InbreedingCoeff=-0.2422;MQ=63.50;MQ0=12;MQRankSum=-2.375;QD=4.85;ReadPosRankSum=-8.334;VQSLOD=-0.3463;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:38,0:38:8.97:71,9,0	0/1:14,0:13:15.05:134,0,15	./.	./.	0/1:11,0:11:10.19:10,0,431	0/1:20,0:19:22.65:28,0,23	0/1:38,0:38:99:272,0,242	1/1:21,0:20:30.04:510,30,0	0/1:23,0:23:67.45:67,0,685	0/1:17,0:17:63.14:240,0,63	1/1:9,0:8:5.27:49,5,0	1/1:14,4:29:3.48:254,3,0	0/1:22,0:22:40.50:40,0,89	1/1:24,0:24:9.43:70,9,0	0/1:34,0:34:6.50:6,0,145	0/1:22,0:22:9.45:9,0,1037	0/1:37,0:37:71.06:71,0,1471	0/1:26,0:26:99:161,0,327	1/1:24,0:22:24.46:357,24,0	1/1:6,0:6:0.27:1,0,0	1/1:61,0:58:18.35:242,18,0	0/0:12,0:12:2.99:0,3,66	1/1:15,0:15:2.96:25,3,0	1/1:39,0:35:2.82:24,3,0	0/1:18,0:18:16.50:39,0,16	0/0:21,0:21:14.82:0,15,385	0/1:22,0:21:0.71:257,0,1	0/1:10,0:10:36.71:37,0,177
chr10	36372747	.	GC	G	1246.14	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.861;DP=671;FS=1.448;HRun=1;HaplotypeScore=68.1910;InbreedingCoeff=0.9969;MQ=87.44;MQ0=0;MQRankSum=-3.833;QD=32.79;ReadPosRankSum=1.115;VQSLOD=3.3928;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,38:38:96.32:1341,96,0	0/0:8,0:8:24.08:0,24,382	0/0:32,0:32:96.23:0,96,1414	0/0:18,0:18:51.03:0,51,726	0/0:22,0:22:63.19:0,63,979	0/0:18,0:18:54.18:0,54,861	0/0:38,0:38:99:0,111,1741	0/0:18,0:18:54.17:0,54,841	0/0:20,0:20:60.18:0,60,917	0/0:23,0:23:69.24:0,69,1099	0/0:14,0:14:42.14:0,42,672	0/0:29,0:29:81.01:0,81,1251	0/0:30,0:30:87.30:0,87,1382	0/0:30,0:30:90.31:0,90,1438	0/0:32,0:32:90.31:0,90,1435	0/0:15,0:15:45.14:0,45,696	0/0:29,0:29:87.30:0,87,1377	0/0:15,0:15:45.15:0,45,715	0/0:19,0:19:54.18:0,54,852	0/0:14,0:14:42.14:0,42,668	0/0:42,0:42:99:0,117,1870	0/0:16,0:16:48.15:0,48,741	0/0:19,0:19:57.18:0,57,884	0/0:44,0:44:99:0,117,1839	0/0:18,0:18:51.17:0,51,798	0/0:35,0:35:99:0,102,1589	0/0:26,0:26:75.24:0,75,1175	0/0:9,0:9:27.09:0,27,431
chr10	36373198	.	CGG	C	14148.54	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=10.671;DP=594;FS=2.688;HRun=4;HaplotypeScore=77.7817;InbreedingCoeff=0.9907;MQ=96.60;MQ0=1;MQRankSum=-5.525;QD=38.98;ReadPosRankSum=3.585;VQSLOD=4.3180;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,33:33:87.29:1281,87,0	1/1:1,8:9:24.08:353,24,0	0/0:27,0:27:81.18:0,81,1396	0/0:28,0:29:81.60:0,82,1214	0/0:21,0:21:57.17:0,57,999	1/1:0,14:14:39.13:574,39,0	1/1:3,24:27:66.22:972,66,0	1/1:2,25:27:72.24:1059,72,0	0/0:29,0:29:84.29:0,84,1567	1/1:1,19:20:57.19:830,57,0	1/1:0,9:9:21.07:309,21,0	0/0:14,0:14:39.13:0,39,725	1/1:0,21:21:60.20:883,60,0	1/1:0,20:20:54.18:795,54,0	1/1:0,24:24:72.24:1060,72,0	0/0:18,0:18:51.17:0,51,955	0/0:22,0:22:66.23:0,66,1222	1/1:0,27:27:69.23:1016,69,0	1/1:1,22:23:63.20:909,63,0	1/1:1,13:14:39.13:574,39,0	1/1:3,40:43:99:1678,114,0	1/1:0,15:15:33.11:486,33,0	0/0:23,0:23:66.22:0,66,1214	0/0:19,0:19:54.19:0,54,1012	1/1:0,14:14:33.11:486,33,0	0/0:26,0:26:78.26:0,78,1423	1/1:0,23:22:60.20:884,60,0	0/0:3,0:2:9.03:0,9,169
chr10	36373859	.	CA	C	2349.60	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=7.951;DP=699;FS=0.478;HRun=2;HaplotypeScore=67.1648;InbreedingCoeff=0.9999;MQ=87.80;MQ0=0;MQRankSum=-2.897;QD=34.55;ReadPosRankSum=2.980;VQSLOD=4.0964;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,141,2043	0/0:12,0:12:36.12:0,36,540	0/0:29,0:29:84.02:0,84,1208	0/0:21,0:21:63.11:0,63,860	0/0:23,0:23:66.22:0,66,986	0/0:30,0:30:90.28:0,90,1309	0/0:20,0:20:57.19:0,57,854	0/0:38,0:38:99:0,114,1674	0/0:17,0:17:48.09:0,48,653	0/0:23,0:23:66.22:0,66,979	0/0:21,0:21:63.20:0,63,924	1/1:1,26:27:78.25:1013,78,0	0/0:27,0:27:81.27:0,81,1214	0/0:21,0:21:63.21:0,63,942	0/0:36,0:36:99:0,108,1600	0/0:34,0:34:99:0,102,1529	0/0:24,0:24:72.23:0,72,1057	0/0:32,0:32:93.30:0,93,1367	0/0:24,0:24:69.23:0,69,1015	0/0:29,0:29:81.27:0,81,1214	0/0:27,0:27:81.26:0,81,1190	0/0:22,0:22:63.20:0,63,924	1/1:0,15:15:42.14:545,42,0	1/1:0,26:26:72.23:935,72,0	0/0:15,0:15:45.15:0,45,674	0/0:16,0:16:48.16:0,48,702	0/0:25,0:25:75.25:0,75,1122	0/0:16,0:16:48.16:0,48,719
chr10	36374872	.	CAA	C	1405.33	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=8.547;DP=679;FS=0.000;HRun=8;HaplotypeScore=78.2820;InbreedingCoeff=0.9994;MQ=85.51;MQ0=0;MQRankSum=-3.377;QD=30.55;ReadPosRankSum=4.173;VQSLOD=3.6428;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,44:46:99:1500,123,0	0/0:16,0:16:45.15:0,45,737	0/0:22,0:21:46.95:0,47,674	0/0:24,0:24:53.90:0,54,796	0/0:21,0:21:57.20:0,57,964	0/0:20,0:20:60.17:0,60,930	0/0:31,0:31:90.30:0,90,1498	0/0:35,0:35:90.30:0,90,1495	0/0:12,0:12:30.10:0,30,507	0/0:24,0:24:72.25:0,72,1217	0/0:23,0:23:63.22:0,63,1063	0/0:18,0:18:45.15:0,45,758	0/0:36,0:36:99:0,108,1809	0/0:17,0:17:51.17:0,51,836	0/0:22,0:23:65.71:0,66,1069	0/0:38,0:38:99:0,114,1921	0/0:36,0:36:99:0,105,1742	0/0:18,0:18:51.17:0,51,862	0/0:17,0:17:45.15:0,45,734	0/0:23,0:23:60.21:0,60,1013	0/0:20,0:20:60.15:0,60,949	0/0:22,0:22:57.20:0,57,960	0/0:19,0:19:51.17:0,51,860	0/0:28,0:28:75.25:0,75,1244	0/0:23,0:23:69.24:0,69,1163	0/0:23,0:23:66.21:0,66,1068	0/0:31,0:31:84.28:0,84,1390	0/0:13,0:13:39.13:0,39,660
chr10	36375306	.	G	GC	8888.32	PASS	AB=0.579;AC=35;AF=0.625;AN=56;BaseQRankSum=-16.083;DP=635;FS=1.081;HRun=9;HaplotypeScore=81.4916;InbreedingCoeff=0.7904;MQ=85.30;MQ0=0;MQRankSum=-2.994;QD=22.50;ReadPosRankSum=-0.590;VQSLOD=5.2697;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,1:39:68.65:0,69,800	1/1:0,8:8:14.81:166,15,0	0/0:23,0:23:16.78:0,17,341	0/0:16,0:16:26.41:0,26,213	0/0:1,0:25:46.85:0,47,138	1/1:3,22:25:60.16:664,60,0	1/1:3,19:23:30.93:552,31,0	1/1:10,14:24:39.06:409,39,0	0/0:1,0:21:34.63:0,35,102	1/1:2,6:8:18.05:199,18,0	1/1:3,9:12:24.06:265,24,0	1/1:5,22:27:60.16:663,60,0	0/1:4,20:24:10:356,0,10	1/1:4,22:26:63.17:694,63,0	1/1:4,21:25:25.08:505,25,0	0/0:4,0:30:48.88:0,49,144	0/0:1,0:38:67.22:0,67,198	1/1:4,18:24:47.02:539,47,0	1/1:3,15:18:45.04:470,45,0	1/1:3,8:12:20.89:213,21,0	1/1:4,17:21:45.12:498,45,0	1/1:4,20:24:50.73:562,51,0	0/1:5,11:17:3.58:360,0,4	1/1:8,24:32:46.14:737,46,0	0/1:8,15:23:46.78:441,0,47	0/0:3,1:26:14.63:0,15,99	1/1:1,21:22:54.15:597,54,0	0/0:10,0:22:22.39:0,22,66
chr10	36375530	.	A	AC	1433.84	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-0.677;DP=763;FS=4.174;HRun=1;HaplotypeScore=74.3578;InbreedingCoeff=0.9960;MQ=81.94;MQ0=0;MQRankSum=-3.229;QD=38.75;ReadPosRankSum=1.330;VQSLOD=4.3816;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,36:37:99:1529,102,0	0/0:8,0:8:21.07:0,21,273	0/0:23,0:23:66.21:0,66,839	0/0:19,0:19:54.15:0,54,680	0/0:29,0:29:87.27:0,87,1115	0/0:30,0:30:87.28:0,87,1129	0/0:44,0:44:99:0,126,1607	0/0:26,0:26:75.24:0,75,974	0/0:20,0:20:60.20:0,60,779	0/0:22,0:22:63.20:0,63,818	0/0:19,0:19:51.15:0,51,648	0/0:37,0:37:99:0,111,1418	0/0:28,0:28:78.23:0,78,994	0/0:33,0:33:96.26:0,96,1213	0/0:35,0:35:99:0,102,1325	0/0:27,0:27:81.25:0,81,1037	0/0:36,0:36:99:0,105,1363	0/0:22,0:22:66.21:0,66,857	0/0:27,0:27:78.23:0,78,984	0/0:16,0:16:45.15:0,45,584	0/0:45,0:45:99:0,135,1743	0/0:24,0:24:72.22:0,72,920	0/0:28,0:28:81.25:0,81,1038	0/0:27,0:27:81.26:0,81,1052	0/0:16,0:16:48.13:0,48,607	0/0:30,0:30:87.27:0,87,1118	0/0:28,0:28:81.25:0,81,1037	0/0:27,0:27:81.26:0,81,1052
chr10	36378008	.	G	GCCATAGGGG	41744.03	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-4.109;DP=672;FS=0.738;HRun=0;HaplotypeScore=209.8229;InbreedingCoeff=0.9014;MQ=76.97;MQ0=0;MQRankSum=-8.420;QD=66.79;ReadPosRankSum=1.765;VQSLOD=4.4172;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:33,0:33:45.15:1849,45,0	1/1:7,0:7:15:433,15,0	0/0:24,0:24:45.09:0,45,936	0/0:23,0:23:36.12:0,36,896	1/1:13,0:13:6.02:187,6,0	1/1:27,0:27:60.14:2270,60,0	1/1:20,0:20:36.12:1492,36,0	1/1:42,0:42:45.15:1559,45,0	1/1:24,0:24:54.09:1992,54,0	1/1:23,0:23:45.15:1719,45,0	1/1:10,0:10:9.03:370,9,0	1/1:42,0:42:99:4395,108,0	1/1:25,3:30:51.16:2241,51,0	1/1:29,0:29:66.18:2514,66,0	1/1:31,0:31:66.23:2856,66,0	1/1:18,0:18:42.14:1696,42,0	1/1:25,0:25:51.18:2133,51,0	1/1:25,0:25:39.13:1679,39,0	1/1:25,0:25:39.13:1332,39,0	1/1:22,0:22:27.09:1151,27,0	1/1:34,0:34:41.50:1285,42,0	1/1:21,0:21:30.09:1130,30,0	1/1:20,0:21:18.05:720,18,0	1/1:21,0:21:33.07:1378,33,0	1/1:25,0:25:51.12:1895,51,0	1/1:24,0:24:21.03:764,21,0	1/1:26,0:25:51.16:2179,51,0	1/1:7,0:7:15.05:525,15,0
chr10	36378019	.	C	CAT	6999.41	PASS	AB=0.762;AC=25;AF=0.446;AN=56;BaseQRankSum=14.971;DP=672;FS=25.646;HRun=0;HaplotypeScore=259.6762;InbreedingCoeff=-0.8121;MQ=73.80;MQ0=0;MQRankSum=-10.264;QD=11.29;ReadPosRankSum=11.266;VQSLOD=2.7429;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:19,9:28:99:288,0,293	0/1:7,1:8:97.17:97,0,152	0/0:23,0:23:62.10:0,62,909	0/0:19,0:19:51.17:0,51,758	0/1:12,3:15:18.60:19,0,149	0/1:17,12:29:99:354,0,494	0/1:18,6:24:99:242,0,411	0/1:37,2:39:99:254,0,795	0/1:14,10:24:99:333,0,370	0/1:18,8:26:99:317,0,373	0/0:9,1:10:8.76:0,9,180	0/1:20,23:43:99:693,0,527	0/1:20,12:32:99:400,0,313	0/1:17,15:32:99:467,0,293	0/1:11,16:27:99:483,0,217	0/1:7,10:17:40.84:397,0,41	0/1:16,10:27:99:314,0,369	0/1:14,8:22:99:272,0,381	0/1:22,4:26:99:265,0,378	0/1:11,8:19:99:243,0,191	0/1:25,8:33:99:212,0,432	0/1:18,4:22:96.11:96,0,258	0/1:16,6:22:99:126,0,299	0/1:14,7:21:99:227,0,151	0/1:15,10:25:99:233,0,422	0/1:20,3:23:77.77:78,0,518	0/1:19,10:28:99:391,0,359	0/1:5,2:7:23.03:197,0,23
chr10	36378021	.	G	GGGGCCAA	21489.76	PASS	AB=0.729;AC=26;AF=0.464;AN=56;BaseQRankSum=1.873;DP=558;FS=10.286;HRun=0;HaplotypeScore=195.2581;InbreedingCoeff=-0.8543;MQ=80.43;MQ0=0;MQRankSum=-6.021;QD=41.73;ReadPosRankSum=3.844;VQSLOD=3.9436;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:11,8:20:99:914,0,111	0/1:4,1:5:99:108,0,117	0/0:23,0:23:66.15:0,66,1327	0/0:20,0:20:53.85:0,54,1040	0/1:10,3:13:7.79:187,0,8	0/1:15,12:27:99:1179,0,205	0/1:12,6:18:99:655,0,207	0/1:25,2:27:99:243,0,508	0/1:11,10:21:99:997,0,212	0/1:15,7:23:99:903,0,171	0/1:7,1:8:23.69:142,0,24	0/1:19,23:42:99:2330,0,277	0/1:11,12:24:99:1292,0,125	0/1:12,15:27:69.50:1560,0,69	0/1:9,16:25:99:1598,0,146	0/1:5,10:15:29.19:1004,0,29	0/1:13,11:24:85.65:1266,0,86	0/1:12,8:20:99:1038,0,122	0/1:13,4:17:99:415,0,209	0/1:8,8:16:37.24:838,0,37	0/1:19,8:27:99:624,0,128	0/1:10,4:14:99:481,0,106	0/1:8,6:14:43.29:574,0,43	0/1:8,7:15:70.58:506,0,71	0/1:14,10:24:99:899,0,240	0/1:16,3:19:99:350,0,102	0/1:14,9:24:99:1153,0,144	0/1:3,2:5:23.75:236,0,24
chr10	36378290	.	T	TAGG	34278.02	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-8.293;DP=641;FS=2.801;HRun=0;HaplotypeScore=85.5069;InbreedingCoeff=0.9980;MQ=83.97;MQ0=0;MQRankSum=-10.782;QD=57.51;ReadPosRankSum=5.065;VQSLOD=7.0963;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,33:34:84.29:1933,84,0	1/1:0,11:11:24.08:553,24,0	0/0:29,0:29:81.27:0,81,1309	0/0:16,0:16:44.64:0,45,680	1/1:2,13:15:27.05:543,27,0	1/1:2,24:26:63.22:1416,63,0	1/1:2,27:30:81.28:1844,81,0	1/1:7,20:27:72.23:1563,72,0	1/1:3,29:33:96.26:2110,96,0	1/1:1,19:21:60.19:1326,60,0	1/1:2,13:16:39.13:889,39,0	1/1:0,25:25:69.24:1578,69,0	1/1:0,22:22:54.19:1232,54,0	1/1:1,20:20:51.18:1162,51,0	1/1:3,18:21:48.16:1082,48,0	1/1:0,22:23:60.21:1371,60,0	1/1:0,25:25:66.23:1521,66,0	1/1:2,20:22:57.15:1255,57,0	1/1:6,15:21:57.19:1238,57,0	1/1:4,23:27:75.26:1663,75,0	1/1:1,37:38:99:2237,99,0	1/1:3,11:14:33.11:749,33,0	1/1:1,15:16:45.15:996,45,0	1/1:0,23:23:56.94:1313,57,0	1/1:2,19:22:54.19:1169,54,0	1/1:3,23:26:78.19:1616,78,0	1/1:2,20:23:57.20:1239,57,0	1/1:1,10:11:30.10:677,30,0
chr10	36378527	.	CT	C	13619.51	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-3.928;DP=538;FS=25.617;HRun=7;HaplotypeScore=90.3513;InbreedingCoeff=0.9838;MQ=79.62;MQ0=0;MQRankSum=-7.152;QD=26.60;ReadPosRankSum=4.042;VQSLOD=3.3108;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,30:31:90.20:918,90,0	1/1:0,7:7:21.05:214,21,0	0/0:14,0:14:21.52:0,22,304	0/0:12,0:12:18.47:0,18,267	1/1:1,11:12:33.07:337,33,0	1/1:2,17:19:45.10:459,45,0	1/1:1,18:19:54.12:551,54,0	1/1:2,15:17:42.09:428,42,0	1/1:1,17:18:51.12:520,51,0	1/1:2,20:22:60.11:598,60,0	1/1:0,16:16:42.09:428,42,0	1/1:1,17:18:48.11:490,48,0	1/1:1,25:26:63.14:642,63,0	1/1:1,26:27:63.14:643,63,0	1/1:0,20:20:54.12:551,54,0	1/1:1,17:18:48.11:490,48,0	1/1:1,20:21:54.12:551,54,0	1/1:4,24:28:66.15:673,66,0	1/1:2,22:24:66.13:666,66,0	1/1:1,26:27:69.14:697,69,0	1/1:1,17:18:51.12:520,51,0	1/1:1,14:15:36.08:367,36,0	1/1:1,16:17:45.10:459,45,0	1/1:1,20:21:54.12:551,54,0	1/1:0,22:22:60.13:612,60,0	1/1:2,17:19:48.11:489,48,0	1/1:2,21:23:60.13:612,60,0	1/1:2,5:7:15.03:153,15,0
chr10	36379105	.	AGTGTGTGT	A	867.49	PASS	AB=1.000;AC=13;AF=0.260;AN=50;BaseQRankSum=2.997;DP=553;FS=4.782;HRun=0;HaplotypeScore=156.1668;InbreedingCoeff=0.6656;MQ=65.38;MQ0=20;MQRankSum=-3.746;QD=6.11;ReadPosRankSum=1.517;VQSLOD=2.3167;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:20:87.12:100,0,87	0/0:5,0:5:0:0,0,0	./.	0/0:32,0:22:0:0,0,0	./.	0/0:13,0:10:15.05:0,15,462	0/0:21,0:20:5.54:0,6,204	0/0:21,0:21:9:0,9,113	1/1:19,2:21:9.03:223,9,0	0/0:24,0:22:24.08:0,24,566	0/0:14,0:13:9.03:0,9,277	1/1:20,0:21:5.35:45,5,0	0/0:14,0:14:14.88:0,15,314	0/0:22,0:20:11.97:0,12,356	0/0:26,0:24:10.64:0,11,282	0/0:20,0:21:15.05:0,15,261	1/1:33,1:32:15.52:339,16,0	0/0:28,0:27:27.09:0,27,845	0/0:19,0:18:18.06:0,18,389	0/0:15,0:13:12.04:0,12,369	0/0:36,0:32:15.05:0,15,452	0/0:17,0:15:15.71:0,16,480	1/1:4,1:5:3.01:70,3,0	1/1:29,0:28:14.68:100,15,0	0/0:13,0:13:12.03:0,12,299	1/1:7,1:7:5.76:148,6,0	0/0:19,0:19:18.06:0,18,459	./.
chr10	36379149	.	TGTGTGTG	T	708.72	PASS	AB=0.983;AC=9;AF=0.161;AN=56;BaseQRankSum=3.515;DP=512;FS=10.031;HRun=0;HaplotypeScore=148.3637;InbreedingCoeff=0.0358;MQ=48.40;MQ0=33;MQRankSum=-3.963;QD=4.27;ReadPosRankSum=-0.540;VQSLOD=1.9982;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:23:45.72:46,0,243	0/0:5,0:5:11.69:0,12,81	0/0:22,0:7:5.67:0,6,47	0/1:21,0:11:2.78:3,0,47	0/0:13,0:12:20.70:0,21,101	0/0:16,0:13:29.42:0,29,497	0/0:28,0:24:33.08:0,33,372	0/0:12,0:12:33.81:0,34,274	1/1:11,1:12:7.59:211,8,0	0/0:20,0:18:49.65:0,50,717	0/0:15,0:13:20.69:0,21,350	0/1:20,0:19:66.97:67,0,118	0/0:12,0:11:21.04:0,21,391	0/0:18,0:15:15.71:0,16,373	0/0:21,0:18:28.04:0,28,347	0/0:15,0:15:35.63:0,36,443	0/1:29,2:28:99:227,0,143	0/0:24,0:24:61.15:0,61,1110	0/0:13,0:8:23.94:0,24,380	0/0:18,0:17:35.44:0,35,589	0/0:29,0:23:29.21:0,29,531	0/0:22,0:18:32.30:0,32,495	0/1:9,0:8:28.57:87,0,29	0/1:29,0:25:99:119,0,125	0/0:20,0:20:33.81:0,34,412	0/1:16,1:17:86.56:87,0,153	0/0:15,0:14:32.55:0,33,503	0/0:8,0:6:8.51:0,9,42
chr10	36379157	.	T	TGTG	1987.17	PASS	AB=0.977;AC=44;AF=0.786;AN=56;BaseQRankSum=-5.171;DP=472;FS=39.157;HRun=0;HaplotypeScore=119.2140;InbreedingCoeff=-0.1033;MQ=55.31;MQ0=31;MQRankSum=6.991;QD=4.30;ReadPosRankSum=7.107;VQSLOD=0.0510;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:24:6.86:87,7,0	1/1:5,0:5:6.75:17,7,0	0/1:25,0:10:25.48:25,0,31	0/1:23,0:13:41.70:42,0,49	1/1:13,0:12:17.41:54,17,0	1/1:12,1:12:2.20:106,2,0	1/1:23,0:22:8.68:59,9,0	0/0:10,0:10:7.49:0,7,96	0/1:12,0:11:5.67:15,0,6	1/1:18,0:19:31.55:146,32,0	1/1:11,0:11:12.04:39,12,0	1/1:21,0:20:6.45:52,6,0	1/1:8,0:7:13.52:75,14,0	0/1:11,1:9:6.39:16,0,6	0/1:15,1:13:0.75:26,0,1	0/1:12,0:12:20.37:20,0,26	0/1:28,0:25:34.22:110,0,34	0/1:17,1:19:42.94:161,0,43	1/1:11,2:8:14.57:180,15,0	1/1:17,1:17:22.44:134,22,0	1/1:26,0:23:24.30:194,24,0	1/1:13,3:13:6.43:148,6,0	1/1:10,0:9:7.84:44,8,0	0/1:31,0:27:42.35:42,0,55	1/1:14,1:15:21.01:134,21,0	0/1:17,0:17:14.79:15,0,25	1/1:10,2:11:15.91:174,16,0	1/1:8,0:6:6.48:19,6,0
chr10	36379160	.	TG	T	7391.32	PASS	AB=0.944;AC=54;AF=0.964;AN=56;BaseQRankSum=-3.253;DP=460;FS=2.017;HRun=7;HaplotypeScore=79.5951;InbreedingCoeff=-0.0447;MQ=61.25;MQ0=28;MQRankSum=0.204;QD=16.07;ReadPosRankSum=1.994;VQSLOD=4.9810;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,22:24:54.06:536,54,0	1/1:0,5:5:12.03:122,12,0	0/1:27,1:13:29.78:35,0,30	0/1:22,2:14:27.16:70,0,27	1/1:3,10:12:27:262,27,0	1/1:4,8:11:24.05:245,24,0	1/1:10,14:21:41.43:384,41,0	1/1:3,7:10:11.98:111,12,0	1/1:5,8:12:20.90:188,21,0	1/1:4,19:21:54.07:526,54,0	1/1:4,9:11:23.88:213,24,0	1/1:5,16:20:41.90:415,42,0	1/1:1,7:7:15.03:152,15,0	1/1:3,9:9:11.78:122,12,0	1/1:4,10:11:20.64:194,21,0	1/1:2,10:12:29.99:286,30,0	1/1:11,16:25:51.11:517,51,0	1/1:6,12:18:42.07:419,42,0	1/1:6,6:7:15:139,15,0	1/1:1,13:13:34.06:327,34,0	1/1:8,16:19:21.05:214,21,0	1/1:6,10:12:29.95:281,30,0	1/1:2,8:9:17.91:157,18,0	1/1:10,21:27:45:459,45,0	1/1:4,10:14:33.05:328,33,0	1/1:3,13:16:39.09:397,39,0	1/1:3,10:12:21:201,21,0	1/1:1,6:6:9.02:92,9,0
chr10	36379260	.	CCCCA	C	8111.31	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=10.846;DP=417;FS=10.602;HRun=0;HaplotypeScore=103.3113;InbreedingCoeff=0.9758;MQ=68.04;MQ0=0;MQRankSum=-9.776;QD=34.52;ReadPosRankSum=0.381;VQSLOD=4.3394;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:63.22:0,63,1544	1/1:0,3:3:6.02:104,6,0	0/0:12,0:12:30.10:0,30,723	0/0:13,0:13:27.09:0,27,567	0/0:17,0:17:45.15:0,45,1100	1/1:6,20:26:48.16:834,48,0	1/1:2,16:18:39.13:661,39,0	1/1:3,15:18:33.07:511,33,0	0/0:13,0:13:30.10:0,30,734	1/1:5,10:15:33.10:541,33,0	1/1:1,11:12:18.02:263,18,0	0/0:19,0:19:54.19:0,54,1319	1/1:0,7:7:21.07:365,21,0	1/1:2,12:14:27.09:470,27,0	1/1:4,11:14:30.10:505,30,0	0/0:11,0:11:18.04:0,18,393	0/0:19,0:19:45.15:0,45,1099	1/1:6,12:18:42.12:701,42,0	1/1:3,8:11:24.08:417,24,0	1/1:2,11:13:30.10:518,30,0	1/1:6,10:16:24.08:415,24,0	1/1:3,7:10:18.06:278,18,0	0/0:13,0:13:30.10:0,30,701	0/0:22,0:22:45.15:0,45,1108	1/1:5,11:16:39.13:656,39,0	0/0:12,0:12:30.10:0,30,754	1/1:4,19:23:54.18:873,54,0	0/0:4,0:4:12.04:0,12,301
chr10	36380637	.	A	AT	19642.66	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-5.988;DP=564;FS=23.011;HRun=0;HaplotypeScore=52.2236;InbreedingCoeff=0.9837;MQ=72.30;MQ0=0;MQRankSum=-4.528;QD=36.17;ReadPosRankSum=4.720;VQSLOD=3.0643;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,18:20:42.35:623,42,0	1/1:1,9:10:27.09:376,27,0	0/0:10,0:10:18.40:0,18,221	0/0:11,0:9:14.13:0,14,189	1/1:0,29:29:78.18:1050,78,0	1/1:0,19:19:51.17:711,51,0	1/1:1,13:14:30.10:418,30,0	1/1:2,30:32:90.24:1188,90,0	1/1:0,12:12:30.10:418,30,0	1/1:1,21:22:63.21:880,63,0	1/1:1,27:28:77.84:964,78,0	1/1:0,18:18:48.16:669,48,0	1/1:0,18:18:48.16:670,48,0	1/1:2,13:15:42.14:583,42,0	1/1:0,37:37:93.31:1296,93,0	1/1:0,13:13:39.13:544,39,0	1/1:0,24:24:57.14:794,57,0	1/1:1,13:14:36.12:502,36,0	1/1:0,26:26:78.21:1022,78,0	1/1:0,33:33:96.11:1265,96,0	1/1:0,12:12:27.09:377,27,0	1/1:0,17:17:51.17:709,51,0	1/1:0,20:20:51.17:712,51,0	1/1:0,9:9:27.09:377,27,0	1/1:0,24:24:63.21:879,63,0	1/1:0,23:23:66.07:777,66,0	1/1:0,32:32:75.25:1046,75,0	1/1:0,22:22:56.98:793,57,0
chr10	36381621	.	C	CCA	32617.83	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-3.016;DP=634;FS=5.873;HRun=0;HaplotypeScore=115.7110;InbreedingCoeff=0.9910;MQ=78.03;MQ0=0;MQRankSum=-10.900;QD=55.76;ReadPosRankSum=5.491;VQSLOD=4.9011;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,38:42:99:2400,123,0	1/1:2,8:10:27.08:511,27,0	0/0:21,0:21:55.07:0,55,868	0/0:28,0:27:61.69:0,62,1109	1/1:0,32:33:90.31:1827,90,0	1/1:0,20:20:60.21:1218,60,0	1/1:6,17:23:69.18:1278,69,0	1/1:0,32:32:93.32:1854,93,0	1/1:4,32:36:99:1994,99,0	1/1:3,19:22:66.22:1280,66,0	1/1:0,20:22:57.20:1142,57,0	1/1:3,21:27:81.25:1520,81,0	1/1:1,23:24:72.25:1424,72,0	1/1:1,20:21:60.21:1207,60,0	1/1:3,26:29:84.29:1675,84,0	1/1:0,18:18:54.19:1096,54,0	1/1:4,15:20:54.10:992,54,0	1/1:5,14:19:57.16:1054,57,0	1/1:1,14:15:45.13:876,45,0	1/1:4,20:24:63.15:1235,63,0	1/1:5,26:31:87.30:1761,87,0	1/1:1,14:16:42.14:852,42,0	1/1:1,14:16:45.15:905,45,0	1/1:5,22:27:66.18:1304,66,0	1/1:2,9:11:30.10:607,30,0	1/1:5,16:21:60.21:1200,60,0	1/1:3,17:20:57.20:1146,57,0	1/1:2,4:6:14.98:262,15,0
chr10	36381663	.	G	GC	13188.94	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-0.123;DP=555;FS=19.416;HRun=7;HaplotypeScore=156.7747;InbreedingCoeff=0.9280;MQ=68.93;MQ0=0;MQRankSum=-4.546;QD=25.36;ReadPosRankSum=5.342;VQSLOD=3.0592;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,32:40:93.21:1085,93,0	1/1:1,11:12:33.10:398,33,0	0/0:18,0:18:34.23:0,34,291	0/0:17,0:16:12.55:0,13,208	1/1:20,0:24:22.81:129,23,0	1/1:3,16:19:48.15:579,48,0	1/1:3,18:21:51.15:613,51,0	1/1:7,9:16:39.12:471,39,0	1/1:24,0:27:59.09:275,59,0	1/1:4,16:20:48.13:565,48,0	1/1:4,12:16:39.11:457,39,0	1/1:5,17:22:51.13:590,51,0	1/1:5,20:25:60.14:707,60,0	1/1:1,15:16:45.14:542,45,0	1/1:3,24:28:81.24:964,81,0	1/1:16,0:18:35.02:172,35,0	1/1:15,1:17:28.10:167,28,0	1/1:3,10:14:33.10:395,33,0	1/1:3,13:16:45.12:530,45,0	1/1:3,26:29:78.20:907,78,0	1/1:10,20:30:66.13:754,66,0	1/1:1,11:12:30.98:364,31,0	1/1:1,14:15:42.13:503,42,0	1/1:4,19:23:48.11:563,48,0	1/1:1,19:20:51.16:615,51,0	1/1:20,0:21:37.43:204,37,0	1/1:3,14:17:51.16:615,51,0	1/1:2,0:2:5.60:26,6,0
chr10	36381665	.	C	CCCCA	6456.07	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-7.613;DP=561;FS=1.916;HRun=0;HaplotypeScore=210.3998;InbreedingCoeff=0.9782;MQ=72.76;MQ0=0;MQRankSum=-5.498;QD=56.14;ReadPosRankSum=2.213;VQSLOD=5.6613;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:85.97:0,86,436	0/0:12,0:12:33.58:0,34,166	0/0:20,0:20:39.55:0,40,606	0/0:19,0:18:32.20:0,32,499	1/1:13,14:27:44.46:1011,44,0	0/0:18,0:18:45.25:0,45,223	0/0:21,0:21:53.97:0,54,283	0/0:16,0:16:39.64:0,40,202	1/1:6,22:28:75.23:1745,75,0	0/0:21,0:21:51.58:0,52,288	0/0:16,0:16:42.88:0,43,248	0/0:19,0:19:51.48:0,51,281	0/0:25,0:25:60.09:0,60,322	0/0:16,0:16:45.45:0,45,233	0/0:28,0:28:76.58:0,77,387	1/1:2,15:18:48.16:1156,48,0	1/1:7,12:19:33.62:1014,34,0	0/0:13,0:13:34.26:0,34,177	0/0:16,0:16:42.44:0,42,218	0/0:28,0:28:74.55:0,75,386	0/0:30,0:30:60.81:0,61,306	0/0:12,0:12:33.81:0,34,175	0/0:15,0:15:39.83:0,40,200	0/0:23,0:23:51.36:0,51,268	0/0:20,0:20:47.58:0,48,231	1/1:3,18:21:57.18:1373,57,0	0/0:17,0:17:48.13:0,48,237	1/1:0,2:2:6.02:156,6,0
chr10	36382421	.	TC	T	611.88	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.232;DP=652;FS=8.539;HRun=1;HaplotypeScore=62.0303;InbreedingCoeff=0.9952;MQ=81.86;MQ0=0;MQRankSum=-3.781;QD=29.14;ReadPosRankSum=-0.033;VQSLOD=2.4244;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,21:21:51.17:707,51,0	0/0:11,0:11:33.11:0,33,527	0/0:19,0:19:57.11:0,57,809	0/0:20,0:20:58.93:0,59,677	0/0:28,0:28:78.22:0,78,1175	0/0:32,0:32:96.31:0,96,1508	0/0:10,0:10:30.10:0,30,479	0/0:36,0:35:93.29:0,93,1425	0/0:18,0:18:51.08:0,51,792	0/0:23,0:23:69.23:0,69,1083	0/0:21,0:21:63.20:0,63,978	0/0:22,0:22:66.23:0,66,1052	0/0:28,0:28:84.26:0,84,1280	0/0:19,0:19:57.17:0,57,886	0/0:24,0:24:72.20:0,72,1122	0/0:22,0:22:66.23:0,66,1051	0/0:28,0:28:84.18:0,84,1305	0/0:33,0:33:99:0,99,1544	0/0:7,0:7:21.07:0,21,336	0/0:30,0:30:87.28:0,87,1362	0/0:15,0:15:45.14:0,45,690	0/0:22,0:22:66.13:0,66,995	0/0:26,0:26:78.25:0,78,1221	0/0:18,0:18:54.14:0,54,818	0/0:21,0:21:60.20:0,60,955	0/0:34,0:34:99:0,102,1598	0/0:37,0:37:99:0,111,1739	0/0:27,0:27:78.18:0,78,1163
chr10	36382843	.	G	GTTCTGTTGAAATACAGACTGAA	89100.59	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-3.422;DP=755;FS=28.075;HRun=0;HaplotypeScore=287.7251;InbreedingCoeff=0.9778;MQ=84.94;MQ0=0;MQRankSum=-12.055;QD=129.70;ReadPosRankSum=6.605;VQSLOD=3.3368;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,2:24:27.09:1786,27,0	1/1:2,7:17:30.02:2682,30,0	0/0:33,0:33:86.60:0,87,3501	0/0:35,0:35:81.18:0,81,3099	1/1:15,2:34:36.12:2688,36,0	1/1:10,4:22:33.11:2769,33,0	1/1:12,1:26:33.11:2799,33,0	1/1:60,0:60:99:9690,157,0	1/1:12,6:30:48.16:3908,48,0	1/1:13,5:30:75.24:5446,75,0	1/1:8,5:22:36.12:2730,36,0	1/1:13,6:29:42.14:3164,42,0	1/1:13,7:38:57.20:4766,57,0	1/1:19,9:39:66.23:5731,66,0	1/1:19,7:38:69.24:6210,69,0	1/1:10,4:27:39.13:2996,39,0	1/1:6,3:12:21.07:1768,21,0	1/1:5,3:15:18.06:1419,18,0	1/1:9,3:19:54.15:3184,54,0	1/1:7,4:23:33.04:2183,33,0	1/1:16,0:16:27.03:1585,27,0	1/1:9,4:28:36.04:2188,36,0	1/1:5,3:17:18.06:1361,18,0	1/1:9,3:21:21.07:1908,21,0	1/1:15,6:33:54.18:4218,54,0	1/1:10,6:26:66.23:5849,66,0	1/1:17,9:36:62.85:5031,63,0	1/1:5,0:5:15.05:1042,15,0
chr10	36383336	.	A	AT	673.55	PASS	AB=0.969;AC=4;AF=0.071;AN=56;BaseQRankSum=-5.241;DP=635;FS=10.815;HRun=10;HaplotypeScore=102.2306;InbreedingCoeff=0.5147;MQ=64.76;MQ0=7;MQRankSum=1.150;QD=8.42;ReadPosRankSum=0.806;VQSLOD=1.3504;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,31:40:71.97:749,72,0	0/0:10,0:11:29:0,29,227	0/0:19,0:18:10.87:0,11,183	0/1:10,0:9:30.19:30,0,71	0/0:23,2:25:30.92:0,31,457	0/0:20,0:20:22.88:0,23,326	0/0:16,0:16:35.94:0,36,295	0/0:29,0:29:68.87:0,69,564	0/0:16,0:16:47.91:0,48,387	0/0:28,0:28:55.44:0,55,447	0/0:21,0:21:37.64:0,38,300	0/0:19,0:19:47.52:0,48,379	0/0:26,0:25:62.91:0,63,517	0/0:24,0:23:62.60:0,63,500	0/0:24,0:24:53.92:0,54,443	0/0:22,1:23:19.76:0,20,363	0/0:22,0:23:53.39:0,53,421	0/0:17,0:17:44.90:0,45,363	0/0:14,0:15:31.99:0,32,252	0/1:28,2:29:1.11:1,0,401	0/0:24,0:24:59.86:0,60,485	0/0:22,0:21:50.92:0,51,418	0/0:17,0:17:44.94:0,45,369	0/0:34,0:34:86.42:0,86,694	0/0:22,0:22:56.88:0,57,464	0/0:32,2:33:42.36:0,42,543	0/0:33,1:33:45.83:0,46,576	0/0:11,0:11:25.22:0,25,200
chr10	36384652	.	AT	A	1062.15	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.504;DP=684;FS=29.894;HRun=5;HaplotypeScore=67.1271;InbreedingCoeff=0.9985;MQ=81.74;MQ0=0;MQRankSum=-2.833;QD=29.50;ReadPosRankSum=2.145;VQSLOD=1.7076;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,35:36:99:1157,102,0	0/0:12,0:12:36.12:0,36,493	0/0:23,0:23:54.17:0,54,690	0/0:16,0:16:45.09:0,45,559	0/0:42,0:42:99:0,117,1583	0/0:29,0:29:87.27:0,87,1172	0/0:22,0:22:63.17:0,63,840	0/0:36,0:36:99:0,102,1353	0/0:20,0:20:54.17:0,54,722	0/0:30,0:30:84.28:0,84,1149	0/0:29,0:29:84.28:0,84,1148	0/0:26,0:26:72.23:0,72,969	0/0:21,0:21:60.20:0,60,820	0/0:32,0:32:96.31:0,96,1297	0/0:25,0:25:75.24:0,75,1010	0/0:24,0:24:72.23:0,72,970	0/0:29,0:29:84.28:0,84,1148	0/0:19,0:19:54.18:0,54,738	0/0:13,0:13:36.12:0,36,492	0/0:32,0:32:93.30:0,93,1256	0/0:20,0:20:54.18:0,54,738	0/0:11,0:11:33.11:0,33,446	0/0:19,0:19:54.16:0,54,715	0/0:27,0:27:81.27:0,81,1104	0/0:23,0:23:69.22:0,69,928	0/0:32,0:32:87.28:0,87,1175	0/0:25,0:25:72.24:0,72,985	0/0:11,0:11:27.09:0,27,369
chr10	36385626	.	G	GC	120.60	PASS	AB=0.830;AC=2;AF=0.036;AN=56;BaseQRankSum=4.182;DP=704;FS=1.601;HRun=0;HaplotypeScore=69.0574;InbreedingCoeff=-0.0370;MQ=70.99;MQ0=1;MQRankSum=4.182;QD=4.02;ReadPosRankSum=-1.260;VQSLOD=3.1665;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:72.24:0,72,1007	0/0:15,0:15:45.15:0,45,625	0/1:9,4:11:99:185,0,150	0/1:15,2:11:23.91:24,0,195	0/0:40,0:40:99:0,120,1634	0/0:27,0:26:78.26:0,78,1091	0/0:11,0:11:30.10:0,30,420	0/0:47,0:47:99:0,141,1940	0/0:26,0:26:75.22:0,75,1015	0/0:38,0:38:99:0,105,1468	0/0:29,0:29:87.29:0,87,1217	0/0:18,0:18:54.18:0,54,755	0/0:24,0:24:72.23:0,72,989	0/0:31,0:31:90.30:0,90,1258	0/0:33,0:33:96.32:0,96,1341	0/0:32,0:32:96.32:0,96,1342	0/0:15,0:15:39.13:0,39,545	0/0:12,0:12:27.09:0,27,376	0/0:18,0:18:54.18:0,54,755	0/0:37,0:37:99:0,108,1509	0/0:19,0:19:57.18:0,57,780	0/0:35,0:35:99:0,102,1426	0/0:31,0:31:90.27:0,90,1223	0/0:16,0:16:48.16:0,48,671	0/0:23,0:23:66.22:0,66,923	0/0:35,0:35:99:0,99,1385	0/0:22,0:22:66.22:0,66,923	0/0:16,0:16:48.12:0,48,634
chr10	36386052	.	G	GT	70.06	PASS	AB=0.828;AC=3;AF=0.054;AN=56;BaseQRankSum=9.805;DP=1096;FS=0.639;HRun=0;HaplotypeScore=115.4910;InbreedingCoeff=-0.0593;MQ=58.44;MQ0=8;MQRankSum=-7.291;QD=0.72;ReadPosRankSum=-2.146;VQSLOD=2.0373;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,159,2165	0/0:13,0:13:17.12:0,17,464	0/0:35,0:11:24.08:0,24,324	0/0:42,0:17:44.68:0,45,573	0/1:26,4:30:26.96:27,0,959	0/0:19,0:19:57.16:0,57,762	0/0:39,0:39:99:0,117,1599	0/0:52,0:51:99:0,153,2107	0/1:48,10:58:96.16:96,0,1701	0/0:42,0:42:99:0,123,1707	0/0:16,0:16:48.16:0,48,670	0/0:52,1:53:99:0,132,2076	0/0:54,0:54:99:0,163,2263	0/0:48,0:48:99:0,141,1920	0/0:55,0:55:99:0,166,2273	0/0:67,9:76:20.55:0,21,2491	0/0:31,3:34:46.07:0,46,1094	0/0:20,0:20:57.16:0,57,774	0/0:25,0:19:57.14:0,57,755	0/0:31,0:31:93.31:0,93,1301	0/0:80,0:80:99:0,229,3186	0/0:31,0:31:93.31:0,93,1300	0/0:35,0:35:99:0,105,1468	0/0:33,0:34:97.52:0,98,1321	0/0:27,0:27:75.25:0,75,1047	0/0:49,5:54:9.35:0,9,1768	0/0:29,0:29:84.27:0,84,1155	0/1:6,3:9:46.93:47,0,225
chr10	36386450	.	GGA	G	7378.86	PASS	AB=0.514;AC=13;AF=0.232;AN=56;BaseQRankSum=16.091;DP=723;FS=2.257;HRun=0;HaplotypeScore=109.2702;InbreedingCoeff=0.9263;MQ=77.29;MQ0=0;MQRankSum=-3.349;QD=37.46;ReadPosRankSum=2.890;VQSLOD=7.0702;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,25:27:72.24:1031,72,0	0/0:11,0:11:27.09:0,27,495	0/0:22,0:22:64.71:0,65,1028	0/0:25,0:25:64.20:0,64,923	1/1:9,33:41:99:1376,99,0	0/0:28,0:28:75.26:0,75,1374	0/0:20,0:20:57.18:0,57,1015	0/0:30,0:30:81.26:0,81,1416	1/1:2,25:27:75.25:1072,75,0	0/0:29,0:29:75.26:0,75,1367	0/0:26,0:26:72.25:0,72,1298	0/0:25,0:25:72.25:0,72,1320	0/0:33,0:33:99:0,99,1756	0/0:20,0:20:51.14:0,51,869	0/0:20,0:20:51.17:0,51,935	1/1:0,31:31:87.29:1244,87,0	1/1:2,16:18:54.15:746,54,0	0/0:27,0:27:75.15:0,75,1290	0/0:25,0:25:72.72:0,73,1311	0/0:29,0:29:75.22:0,75,1274	0/0:21,0:21:57.20:0,57,1020	0/0:21,0:21:63.20:0,63,1106	0/0:32,0:32:90.23:0,90,1536	0/0:17,0:17:51.17:0,51,935	0/0:33,0:33:90.31:0,90,1632	0/1:2,34:36:4.63:1309,0,5	0/0:32,0:32:87.25:0,87,1545	1/1:3,13:15:42.14:599,42,0
chr10	36386521	.	A	AT	10508.31	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-9.355;DP=587;FS=18.181;HRun=10;HaplotypeScore=69.6095;InbreedingCoeff=0.9214;MQ=68.82;MQ0=0;MQRankSum=-1.798;QD=21.94;ReadPosRankSum=0.909;VQSLOD=3.8670;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:65.88:0,66,539	1/1:1,4:5:12.03:128,12,0	0/0:11,0:12:5.87:0,6,82	0/0:15,0:16:11.38:0,11,189	1/1:7,30:38:86.98:882,87,0	1/1:4,29:33:66.17:704,66,0	1/1:2,9:11:21.05:224,21,0	1/1:10,27:38:87:890,87,0	1/1:8,9:17:14.43:336,14,0	1/1:6,23:29:19.88:622,20,0	1/1:3,14:17:39.06:403,39,0	0/0:27,0:27:74.91:0,75,616	1/1:1,22:23:38.52:615,39,0	1/1:3,14:17:33.08:352,33,0	1/1:2,16:18:39.10:416,39,0	1/1:7,10:17:33.01:329,33,0	1/1:3,12:15:33.06:341,33,0	1/1:5,10:15:27.07:288,27,0	1/1:16,15:32:51.11:532,51,0	1/1:3,27:30:75.13:777,75,0	1/1:1,10:11:27.07:288,27,0	1/1:4,12:16:14.45:359,14,0	0/0:14,1:15:3.97:0,4,239	0/0:13,0:13:20.93:0,21,169	1/1:6,22:28:26.48:487,26,0	1/1:11,12:23:42.11:448,42,0	1/1:6,24:30:60.62:641,61,0	1/1:1,15:16:42.11:448,42,0
chr10	36389210	.	G	GC	6462.21	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-14.457;DP=707;FS=0.687;HRun=3;HaplotypeScore=63.5736;InbreedingCoeff=0.9970;MQ=82.25;MQ0=0;MQRankSum=-1.604;QD=36.93;ReadPosRankSum=3.054;VQSLOD=5.3522;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,30:32:84.28:1167,84,0	0/0:16,0:16:48.13:0,48,565	0/0:22,0:22:63.18:0,63,738	0/0:16,0:16:37.66:0,38,434	1/1:2,25:27:72.17:982,72,0	0/0:19,0:19:54.17:0,54,648	0/0:35,0:35:99:0,105,1260	0/0:33,0:32:84.24:0,84,989	1/1:1,21:22:63.21:882,63,0	0/0:27,0:27:75.22:0,75,889	0/0:23,0:23:66.17:0,66,761	0/0:18,0:18:48.15:0,48,575	0/0:23,0:23:66.20:0,66,788	0/0:21,0:21:60.18:0,60,720	0/0:33,0:33:99:0,99,1177	1/1:1,26:27:75.25:1050,75,0	1/1:1,35:36:93.31:1302,93,0	0/0:23,0:23:69.19:0,69,814	0/0:18,0:18:48.14:0,48,568	0/0:27,0:27:72.17:0,72,838	0/0:46,0:46:99:0,123,1426	0/0:22,0:22:63.19:0,63,756	0/0:21,0:21:57.17:0,57,682	0/0:32,0:32:90.18:0,90,1035	0/0:33,0:33:87.25:0,87,1032	1/1:3,23:26:33.20:869,33,0	0/0:24,0:24:72.20:0,72,842	1/1:0,5:5:15.05:210,15,0
chr10	36390889	.	G	GCATA	14660.65	PASS	AB=0.693;AC=29;AF=0.518;AN=56;BaseQRankSum=-15.370;DP=894;FS=7.075;HRun=0;HaplotypeScore=181.6218;InbreedingCoeff=0.7637;MQ=58.68;MQ0=8;MQRankSum=4.181;QD=29.09;ReadPosRankSum=1.409;VQSLOD=4.2089;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:32:24.03:0,24,224	1/1:4,10:14:27.09:645,27,0	0/0:34,0:18:8.99:0,9,78	0/0:36,0:18:9.56:0,10,140	0/0:10,0:34:48.46:0,48,447	1/1:9,14:23:30.10:715,30,0	0/1:14,18:32:14.51:683,0,15	1/1:44,0:39:26.98:256,27,0	0/0:15,0:38:48.94:0,49,449	1/1:14,18:33:63.15:1399,63,0	1/1:5,16:24:36.12:848,36,0	0/0:37,0:37:44.18:0,44,932	1/1:9,18:28:24.08:573,24,0	1/1:10,29:39:30.64:1743,31,0	1/1:15,29:44:12.58:1314,13,0	0/0:9,0:39:81.07:0,81,746	0/0:11,0:30:44.93:0,45,419	0/1:12,5:17:35.57:203,0,36	1/1:12,7:18:21.07:473,21,0	1/1:9,21:31:45.15:1072,45,0	0/1:24,22:48:88.65:1006,0,89	1/1:15,26:42:51.18:1216,51,0	0/0:30,0:31:66.15:0,66,934	0/0:32,0:32:48.12:0,48,692	1/1:16,18:35:51.17:1202,51,0	0/0:7,0:27:43.77:0,44,454	1/1:9,21:30:12.61:1313,13,0	0/0:5,0:20:36.04:0,36,335
chr10	36391072	.	GAA	G	2930.48	PASS	AB=0.788;AC=14;AF=0.250;AN=56;BaseQRankSum=14.647;DP=644;FS=1.670;HRun=13;HaplotypeScore=101.3757;InbreedingCoeff=0.7804;MQ=71.38;MQ0=0;MQRankSum=-1.189;QD=15.42;ReadPosRankSum=5.689;VQSLOD=2.8133;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:6,0:23:16.58:50,0,17	0/0:8,0:8:15.04:0,15,202	0/1:19,0:15:13.21:13,0,104	0/0:18,0:16:2.60:0,3,186	1/1:6,18:24:41.98:407,42,0	0/0:22,0:22:60.17:0,60,816	0/0:12,0:13:29.47:0,29,336	0/0:35,0:38:83.07:0,83,967	1/1:5,13:19:41.08:384,41,0	0/0:24,1:29:33.02:0,33,707	0/0:22,1:24:18.51:0,19,522	0/0:4,0:27:45.04:0,45,435	0/0:21,0:23:59.53:0,60,676	0/0:25,0:24:63.10:0,63,832	0/0:27,1:28:28.07:0,28,720	1/1:1,26:29:80.04:745,80,0	1/1:4,16:20:45.04:436,45,0	0/0:29,0:29:75.12:0,75,997	0/0:19,0:21:50.08:0,50,568	0/0:28,0:29:71.59:0,72,878	0/0:8,0:8:21.04:0,21,249	0/0:20,0:26:56.12:0,56,663	0/0:5,0:20:39.07:0,39,398	0/0:5,0:14:23.56:0,24,257	0/0:19,0:22:52.57:0,53,604	1/1:8,23:31:68.94:667,69,0	0/0:27,0:29:71.15:0,71,871	1/1:8,16:25:44.74:419,45,0
chr10	36391632	.	C	CAGAT	2655.13	PASS	AB=0.885;AC=24;AF=0.480;AN=50;BaseQRankSum=0.836;DP=719;FS=4.837;HRun=0;HaplotypeScore=168.0476;InbreedingCoeff=0.5405;MQ=60.06;MQ0=4;MQRankSum=-3.039;QD=7.20;ReadPosRankSum=-2.427;VQSLOD=2.1843;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:36,0:36:30.10:558,30,0	0/1:5,3:8:15.90:129,0,16	./.	./.	1/1:41,0:38:8.77:96,9,0	0/0:28,0:28:27.02:0,27,320	0/0:17,0:15:2.51:0,3,24	./.	1/1:28,0:27:11.80:151,12,0	0/1:40,0:39:42.85:188,0,43	1/1:12,9:21:6.02:138,6,0	0/1:30,0:30:14.03:14,0,225	1/1:12,5:22:9.03:196,9,0	0/0:27,0:27:42.07:0,42,527	1/1:18,7:25:12.04:276,12,0	1/1:23,0:23:9.02:125,9,0	1/1:15,0:11:2.99:23,3,0	0/0:13,0:21:12.48:0,12,112	0/0:23,0:23:21.03:0,21,273	0/0:31,0:31:30.01:0,30,325	0/0:22,0:22:20.27:0,20,255	0/1:27,8:35:99:249,0,137	0/0:19,0:19:20.84:0,21,167	0/0:28,0:28:30:0,30,282	0/0:19,0:20:24.03:0,24,280	1/1:40,0:40:44.99:650,45,0	0/0:29,0:28:36.07:0,36,475	1/1:5,0:5:3.01:48,3,0
chr10	36391659	.	A	ATAGG	2122.11	PASS	AB=1.000;AC=12;AF=0.231;AN=52;BaseQRankSum=-2.678;DP=680;FS=0.443;HRun=0;HaplotypeScore=150.3307;InbreedingCoeff=-0.0911;MQ=55.14;MQ0=15;MQRankSum=1.650;QD=6.72;ReadPosRankSum=3.389;VQSLOD=2.6965;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:8,41:50:18.29:808,18,0	0/1:7,0:7:69.83:70,0,107	./.	./.	0/1:46,0:43:99:247,0,259	0/0:30,0:30:78.02:0,78,895	0/0:18,0:16:44.72:0,45,389	0/0:35,0:30:80.57:0,81,632	0/1:30,0:29:76.60:205,0,77	0/0:35,0:34:33.25:0,33,632	0/1:19,0:19:54.84:55,0,192	0/0:23,0:23:54.08:0,54,702	0/1:25,0:25:70.71:71,0,298	0/0:26,0:26:74.48:0,74,1012	0/1:28,0:28:99:102,0,450	0/1:25,0:25:99:235,0,184	0/1:19,0:15:87.95:88,0,94	0/0:21,0:20:28.15:0,28,355	0/0:21,0:15:36.06:0,36,497	0/0:32,0:32:92.96:0,93,1034	0/0:22,0:22:57.02:0,57,661	0/1:35,0:35:94.66:95,0,626	0/0:18,0:17:45.04:0,45,535	0/0:23,0:23:59.88:0,60,728	0/0:16,0:16:48.07:0,48,618	0/1:32,0:30:99:301,0,273	0/0:32,0:31:90.03:0,90,1085	0/0:3,0:3:8.90:0,9,62
chr10	36393301	.	T	TTAATGTACACTTC	21264.26	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-2.569;DP=542;FS=4.686;HRun=0;HaplotypeScore=197.7751;InbreedingCoeff=0.9886;MQ=78.99;MQ0=0;MQRankSum=-15.025;QD=158.69;ReadPosRankSum=1.116;VQSLOD=5.0103;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,11:25:54.11:3135,54,0	0/0:4,0:4:9.03:0,9,368	0/0:21,0:21:60.21:0,60,2125	0/0:13,0:13:39.13:0,39,1564	1/1:5,16:23:63.21:3820,63,0	0/0:16,0:16:42.13:0,42,1536	0/0:19,0:19:51.11:0,51,1601	0/0:34,0:34:99:0,99,3623	1/1:8,12:21:60.16:3772,60,0	0/0:16,0:16:48.16:0,48,1908	0/0:17,0:17:51.18:0,51,2103	0/0:16,0:15:42.14:0,42,1669	0/0:16,0:16:48.16:0,48,1884	0/0:25,0:25:72.25:0,72,2945	0/0:16,0:16:45.14:0,45,1689	1/1:4,11:17:42.14:2739,42,0	1/1:4,6:12:27.56:1755,28,0	0/0:15,0:15:42.14:0,42,1642	0/0:21,0:21:63.22:0,63,2477	0/0:27,0:27:78.27:0,78,3026	0/0:9,0:9:27.09:0,27,939	0/0:11,0:11:30.10:0,30,1234	0/0:23,0:23:69.24:0,69,2773	0/0:23,0:23:66.18:0,66,2421	0/0:35,0:35:99:0,102,3996	1/1:13,13:28:81.23:4532,81,0	0/0:31,0:31:90.20:0,90,3541	1/1:4,4:8:24.08:1510,24,0
chr10	36393369	.	C	CT	2274.59	PASS	AB=0.833;AC=33;AF=0.825;AN=40;BaseQRankSum=0.169;DP=369;FS=6.690;HRun=12;HaplotypeScore=72.6969;InbreedingCoeff=-0.0928;MQ=37.91;MQ0=25;MQRankSum=-0.642;QD=6.44;ReadPosRankSum=-0.084;VQSLOD=2.0500;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/1:5,2:7:10.18:46,0,10	0/1:5,0:3:0:0,0,0	./.	./.	1/1:15,3:18:14.96:131,15,0	1/1:14,3:17:9.49:88,9,0	0/1:24,6:27:26.50:130,0,27	./.	1/1:14,6:18:15.46:138,15,0	1/1:17,7:24:16.84:147,17,0	1/1:10,0:8:8.40:58,8,0	0/1:10,3:13:2.98:77,0,3	1/1:11,3:13:7.25:59,7,0	1/1:14,5:20:9.83:195,10,0	./.	./.	1/1:8,9:16:25.42:219,25,0	1/1:11,4:13:5.18:82,5,0	0/1:16,11:28:5.76:114,0,6	1/1:6,3:7:9.91:80,10,0	1/1:12,11:22:32.88:289,33,0	0/1:16,0:16:0.03:85,0,0	1/1:9,0:9:17.85:98,18,0	0/1:16,12:28:22.28:124,0,22	./.	1/1:15,11:26:8.41:219,8,0	./.
chr10	36393792	.	CA	C	6949.60	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=12.385;DP=705;FS=5.874;HRun=2;HaplotypeScore=73.0762;InbreedingCoeff=1.0000;MQ=90.46;MQ0=0;MQRankSum=-1.347;QD=34.75;ReadPosRankSum=1.817;VQSLOD=5.2411;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,44:44:99:1594,123,0	0/0:13,0:13:39.13:0,39,584	0/0:30,0:30:83.98:0,84,1044	0/0:28,0:28:73.44:0,73,1018	1/1:0,33:33:81.11:990,81,0	0/0:20,0:19:60.20:0,60,899	0/0:29,0:29:84.28:0,84,1240	0/0:23,0:23:66.21:0,66,954	1/1:0,28:28:75.24:973,75,0	0/0:25,0:25:72.23:0,72,1047	0/0:19,0:19:54.17:0,54,789	0/0:19,0:19:57.15:0,57,795	0/0:29,0:29:84.26:0,84,1215	0/0:23,0:23:69.22:0,69,1014	0/0:24,0:24:69.22:0,69,1014	1/1:1,20:21:54.18:701,54,0	1/1:1,33:34:93.30:1206,93,0	0/0:27,0:26:78.26:0,78,1169	0/0:21,0:21:63.21:0,63,944	0/0:23,0:23:63.21:0,63,943	0/0:44,0:44:99:0,126,1865	0/0:18,0:18:54.15:0,54,751	0/0:19,0:19:51.16:0,51,744	0/0:21,0:21:63.21:0,63,944	0/0:20,0:20:60.18:0,60,876	1/1:0,24:24:72.20:903,72,0	0/0:29,0:29:87.26:0,87,1262	1/1:0,16:16:45.15:583,45,0
chr10	36395644	.	TA	T	1324.52	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=5.028;DP=664;FS=1.641;HRun=9;HaplotypeScore=75.3680;InbreedingCoeff=0.9289;MQ=66.23;MQ0=0;MQRankSum=-1.295;QD=19.48;ReadPosRankSum=1.193;VQSLOD=4.1642;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:49,1:50:99:0,103,1386	0/0:8,0:8:24.07:0,24,277	0/0:14,0:14:24.78:0,25,290	0/0:17,0:16:2.71:0,3,173	0/0:32,0:32:96.25:0,96,1079	0/0:17,0:17:45.10:0,45,492	0/0:26,0:26:66.13:0,66,714	0/0:30,0:30:69.18:0,69,777	0/0:19,0:19:51.14:0,51,578	0/0:40,0:40:99:0,111,1274	0/0:12,0:12:33.08:0,33,362	1/1:2,23:25:60.03:549,60,0	0/0:15,0:15:39.10:0,39,438	0/0:16,0:16:36.10:0,36,407	0/0:23,0:23:63.19:0,63,727	0/0:16,0:16:48.13:0,48,544	0/0:32,0:32:90.24:0,90,1026	0/0:18,0:18:48.08:0,48,537	0/0:24,0:25:59.99:0,60,655	0/0:27,0:28:69.03:0,69,768	0/0:41,2:43:71.43:0,71,1309	0/0:20,0:20:51.14:0,51,579	1/1:3,19:22:19.35:423,19,0	1/1:2,19:21:54.03:494,54,0	0/0:17,0:17:39.12:0,39,450	0/0:38,0:38:93.26:0,93,1061	0/0:24,0:24:69.19:0,69,785	0/0:14,1:15:14.65:0,15,412
chr10	36396861	.	A	AGCT	35102.25	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=2.627;DP=596;FS=3.197;HRun=0;HaplotypeScore=153.0797;InbreedingCoeff=0.9147;MQ=75.24;MQ0=0;MQRankSum=-9.331;QD=63.02;ReadPosRankSum=5.014;VQSLOD=6.0727;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,36:42:99:2636,114,0	1/1:3,14:17:45.15:1071,45,0	0/0:16,0:16:41.85:0,42,586	0/0:23,0:22:56.50:0,56,980	1/1:1,19:20:51.17:1147,51,0	1/1:5,17:22:60.19:1356,60,0	1/1:3,14:17:45.15:1000,45,0	1/1:8,18:26:78.26:1806,78,0	1/1:2,32:34:99:2388,102,0	1/1:3,29:32:96.33:2191,96,0	1/1:3,15:18:54.17:1156,54,0	1/1:3,12:15:42.10:957,42,0	1/1:1,13:15:42.14:966,42,0	1/1:4,16:20:60.19:1317,60,0	1/1:8,24:32:93.29:2089,93,0	1/1:2,18:20:60.21:1438,60,0	1/1:0,20:20:57.20:1387,57,0	1/1:7,27:34:96.33:2276,96,0	1/1:1,7:8:24.08:587,24,0	1/1:3,19:22:60.19:1302,60,0	1/1:5,11:16:24.06:513,24,0	1/1:4,14:18:51.16:1056,51,0	1/1:3,11:14:39.13:804,39,0	1/1:4,12:17:36.12:770,36,0	1/1:5,25:30:78.25:1782,78,0	1/1:1,18:19:57.19:1298,57,0	1/1:5,23:28:81.19:1735,81,0	1/1:0,1:1:3.01:73,3,0
chr10	36396865	.	TC	T	13787.80	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-0.081;DP=595;FS=17.529;HRun=5;HaplotypeScore=198.7525;InbreedingCoeff=0.9590;MQ=75.07;MQ0=0;MQRankSum=-3.878;QD=27.36;ReadPosRankSum=7.717;VQSLOD=1.9830;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:5,39:44:99:1097,99,0	1/1:0,18:18:45.08:474,45,0	0/0:15,0:15:44.18:0,44,580	0/0:25,0:24:69.17:0,69,896	1/1:1,19:20:51.12:552,51,0	1/1:1,20:21:54.15:594,54,0	1/1:3,15:18:30.71:347,31,0	1/1:3,21:24:62.21:704,62,0	1/1:1,34:35:96.26:1066,96,0	1/1:1,33:34:95.47:975,95,0	1/1:0,18:18:50.94:522,51,0	0/0:18,0:18:45.14:0,45,580	1/1:0,15:15:44.48:456,44,0	1/1:1,19:20:48.11:513,48,0	1/1:3,28:31:81.16:872,81,0	1/1:1,20:21:57.10:641,57,0	1/1:1,19:20:49.94:563,50,0	1/1:3,30:33:87.24:979,87,0	1/1:0,8:8:24.07:269,24,0	1/1:3,19:22:45.73:496,46,0	1/1:6,9:15:27.06:298,27,0	1/1:2,15:17:42.06:433,42,0	0/0:17,0:17:36.12:0,36,474	0/0:16,0:16:23.25:0,23,319	1/1:7,20:27:55.13:642,55,0	1/1:0,18:18:53.83:557,54,0	1/1:1,23:24:66.14:703,66,0	1/1:0,1:1:3.01:34,3,0
chr10	36396866	.	C	CCT	17620.69	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-0.409;DP=598;FS=19.064;HRun=0;HaplotypeScore=196.5565;InbreedingCoeff=0.9589;MQ=75.08;MQ0=0;MQRankSum=-5.086;QD=34.82;ReadPosRankSum=6.552;VQSLOD=4.1302;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:42,0:42:99:1312,105,0	1/1:18,0:18:45.15:681,45,0	0/0:15,0:15:45.11:0,45,656	0/0:25,0:24:72.12:0,72,1002	1/1:21,0:21:51.05:697,51,0	1/1:21,0:21:55.23:728,55,0	1/1:18,0:18:38.90:565,39,0	1/1:23,0:23:58.07:830,58,0	1/1:35,0:35:99:1230,99,0	1/1:33,0:33:95.09:1228,95,0	1/1:18,0:18:50.84:692,51,0	0/0:18,0:18:29.49:0,29,331	1/1:15,0:15:44.64:720,45,0	1/1:20,0:20:49.41:746,49,0	1/1:30,1:31:80.10:1072,80,0	1/1:21,0:21:58.38:638,58,0	1/1:20,0:20:54.91:662,55,0	1/1:33,0:33:93.49:1003,93,0	1/1:8,0:8:23.86:312,24,0	1/1:21,1:22:57.46:685,57,0	1/1:16,0:16:35.94:474,36,0	1/1:17,0:17:41.83:630,42,0	0/0:17,0:17:34.27:0,34,282	0/0:17,0:17:21.88:0,22,158	1/1:25,1:27:64.25:894,64,0	1/1:21,0:21:57.13:790,57,0	1/1:25,0:25:68.84:990,69,0	1/1:1,0:1:3.01:43,3,0
chr10	36399043	.	TCATCTGCAC	T	27750.78	PASS	AB=0.957;AC=41;AF=0.732;AN=56;BaseQRankSum=15.465;DP=583;FS=0.378;HRun=0;HaplotypeScore=176.1558;InbreedingCoeff=0.9054;MQ=63.80;MQ0=0;MQRankSum=-16.060;QD=62.36;ReadPosRankSum=-0.341;VQSLOD=4.5723;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,39:43:84.25:2429,84,0	1/1:0,7:7:18.06:516,18,0	0/0:7,0:7:21.07:0,21,678	0/0:14,0:14:33.11:0,33,984	0/0:15,0:15:42.14:0,42,1875	1/1:0,13:13:39.13:1156,39,0	1/1:1,23:24:57.20:1743,57,0	1/1:4,19:23:57.18:1525,57,0	0/0:25,0:25:69.24:0,69,2970	1/1:1,17:18:44.67:1157,45,0	1/1:0,17:17:36.12:957,36,0	1/1:0,24:24:63.22:1929,63,0	1/1:1,23:24:60.21:1837,60,0	1/1:2,33:35:84.29:2532,84,0	1/1:2,25:27:63.22:1928,63,0	0/0:23,0:23:63.22:0,63,2941	0/0:30,0:30:84.29:0,84,3958	1/1:2,17:19:33.11:978,33,0	1/1:1,12:13:33.11:944,33,0	1/1:0,15:15:39.13:1127,39,0	1/1:6,22:28:42.14:1171,42,0	1/1:1,25:26:48.16:1444,48,0	1/1:0,10:10:27.09:824,27,0	1/1:1,19:20:17.91:502,18,0	1/1:0,19:19:51.18:1558,51,0	0/1:21,1:22:25.66:26,0,2791	1/1:0,18:18:48.16:1470,48,0	0/0:24,0:24:69.24:0,69,3336
chr10	36399572	.	TGAAAGCTGAGTC	T	10773.14	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=14.486;DP=566;FS=6.459;HRun=0;HaplotypeScore=196.7281;InbreedingCoeff=0.9905;MQ=79.47;MQ0=0;MQRankSum=-14.658;QD=81.61;ReadPosRankSum=1.697;VQSLOD=3.9911;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,29:35:66.23:2471,66,0	0/0:7,0:7:21.07:0,21,1283	0/0:21,0:21:59.57:0,60,2728	0/0:12,0:12:36.12:0,36,1993	0/0:16,0:16:48.16:0,48,2831	1/1:2,17:19:51.18:1850,51,0	1/1:3,23:26:60.21:2258,60,0	0/0:25,0:25:75.25:0,75,4136	0/0:26,0:26:78.27:0,78,4792	1/1:0,11:11:33.10:1109,33,0	1/1:0,8:8:12.04:463,12,0	0/0:31,0:31:93.32:0,93,5713	0/0:16,0:16:48.16:0,48,2897	0/0:18,0:18:54.16:0,54,2798	1/1:0,15:15:39.13:1465,39,0	0/0:24,0:24:72.24:0,72,3950	0/0:50,0:50:99:0,141,8248	1/1:5,13:18:30.10:1158,30,0	0/0:16,0:16:48.16:0,48,2526	0/0:14,0:14:42.14:0,42,2553	0/0:42,0:42:99:0,126,7551	0/0:15,0:15:45.15:0,45,2667	0/0:10,0:10:30.10:0,30,1877	0/0:35,0:35:99:0,105,6115	0/0:13,0:13:39.13:0,39,2398	0/0:20,0:20:60.21:0,60,3585	0/0:17,0:17:51.17:0,51,2876	0/0:6,0:6:15.05:0,15,939
chr10	36399760	.	A	AGG	19159.97	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-14.661;DP=637;FS=14.545;HRun=3;HaplotypeScore=72.1917;InbreedingCoeff=0.9943;MQ=79.00;MQ0=2;MQRankSum=-3.182;QD=43.45;ReadPosRankSum=1.538;VQSLOD=3.4016;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,37:39:84.24:1504,84,0	1/1:0,6:5:12.04:220,12,0	0/0:14,0:14:30:0,30,374	0/0:23,0:23:50.10:0,50,562	0/0:22,0:22:60.20:0,60,834	1/1:1,24:25:60.21:1099,60,0	1/1:0,26:26:66.23:1210,66,0	1/1:5,23:29:69.18:1156,69,0	0/0:32,0:32:93.31:0,93,1301	1/1:2,13:15:39.13:715,39,0	1/1:1,12:14:33.11:603,33,0	1/1:3,29:32:84.29:1528,84,0	1/1:2,21:24:51.17:935,51,0	1/1:0,16:16:48.16:880,48,0	1/1:2,24:25:60.21:1098,60,0	0/0:28,0:28:81.27:0,81,1133	0/0:35,0:35:99:0,102,1407	1/1:3,14:17:39.13:715,39,0	1/1:0,19:20:60.17:1002,60,0	1/1:1,15:16:36.12:651,36,0	1/1:2,32:33:78.27:1430,78,0	1/1:0,16:16:45.15:824,45,0	1/1:0,13:13:27.09:495,27,0	1/1:1,29:29:75.26:1372,75,0	1/1:2,19:21:45.07:755,45,0	0/0:33,0:33:96.32:0,96,1343	1/1:2,20:22:54.18:969,54,0	0/0:9,0:9:27.09:0,27,378
chr10	36399984	.	A	ATT	6761.63	PASS	AB=0.588;AC=39;AF=0.696;AN=56;BaseQRankSum=-0.197;DP=540;FS=0.000;HRun=11;HaplotypeScore=74.8089;InbreedingCoeff=0.8883;MQ=77.65;MQ0=1;MQRankSum=-0.139;QD=18.73;ReadPosRankSum=-1.141;VQSLOD=3.6343;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,1:20:35.45:155,35,0	0/1:3,5:10:11.50:165,0,11	0/0:18,0:17:14.76:0,15,134	0/0:10,0:10:8.72:0,9,69	0/0:16,0:17:32.93:0,33,358	1/1:3,0:21:34.93:120,35,0	1/1:2,0:10:17.47:60,17,0	1/1:2,18:21:50.66:702,51,0	0/0:18,0:18:51.06:0,51,489	1/1:5,0:21:11.83:115,12,0	1/1:1,0:19:40.62:154,41,0	1/1:3,16:19:42.14:608,42,0	1/1:2,16:21:44.12:582,44,0	1/1:7,11:21:32.08:393,32,0	1/1:2,0:18:29.94:103,30,0	0/0:17,0:18:53.83:0,54,506	0/0:31,0:32:83.82:0,84,797	1/1:1,0:13:10.24:80,10,0	1/1:3,5:8:12.04:168,12,0	1/1:3,20:29:69.54:794,70,0	1/1:1,12:14:30.08:435,30,0	1/1:1,12:15:38.57:482,39,0	1/1:6,9:18:26.36:323,26,0	1/1:2,10:13:21.03:281,21,0	1/1:3,18:23:36.12:521,36,0	0/0:39,0:39:93.06:0,93,902	1/1:8,18:26:35.86:521,36,0	0/0:25,0:26:47.73:0,48,448
chr10	36400108	.	GGTTTTTGGT	G	2154.60	PASS	AB=1.000;AC=12;AF=0.214;AN=56;BaseQRankSum=0.357;DP=700;FS=2.483;HRun=0;HaplotypeScore=295.0796;InbreedingCoeff=0.3403;MQ=65.88;MQ0=9;MQRankSum=1.575;QD=10.94;ReadPosRankSum=-5.136;VQSLOD=1.5450;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:24:61.11:61,0,442	0/0:9,0:9:26.65:0,27,294	0/0:73,0:35:75.43:0,75,1103	0/0:65,0:35:47:0,47,956	0/0:26,0:26:78.26:0,78,3359	0/0:21,0:20:43.39:0,43,558	0/0:16,0:16:45.44:0,45,519	0/1:32,0:31:32.02:32,0,895	0/0:22,0:22:66.23:0,66,2663	0/1:31,0:31:1.33:1,0,819	0/0:23,0:23:27.29:0,27,693	1/1:7,13:20:45.52:1032,46,0	0/0:19,0:19:33.14:0,33,555	0/0:24,0:24:23.18:0,23,657	0/0:20,0:20:57.52:0,58,560	0/0:18,0:18:54.19:0,54,2345	0/0:36,0:36:99:0,108,3861	0/0:17,0:17:18.11:0,18,422	0/0:11,0:11:28.13:0,28,352	0/1:35,0:35:33.81:34,0,750	0/1:8,0:7:3.10:3,0,98	0/1:17,0:17:6.28:6,0,359	1/1:10,10:20:40.41:791,40,0	1/1:8,2:10:1.63:345,2,0	0/0:24,0:24:5.42:0,5,547	0/0:30,0:30:90.29:0,90,3450	0/0:27,0:25:8.26:0,8,695	0/0:22,0:22:66.23:0,66,3179
chr10	36400120	.	TTTTG	T	11985.04	PASS	AB=0.818;AC=40;AF=0.714;AN=56;BaseQRankSum=15.815;DP=647;FS=13.989;HRun=0;HaplotypeScore=195.9346;InbreedingCoeff=0.8230;MQ=55.68;MQ0=6;MQRankSum=-12.323;QD=28.20;ReadPosRankSum=-0.103;VQSLOD=3.6129;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:13,9:22:38.72:535,39,0	1/1:6,4:10:24.07:342,24,0	0/0:47,0:27:18.03:0,18,293	0/0:42,0:25:16.58:0,17,243	0/0:25,0:25:63.22:0,63,1485	1/1:7,11:18:39.13:624,39,0	1/1:11,5:16:24:327,24,0	1/1:21,10:30:39.08:537,39,0	0/0:27,0:27:66.20:0,66,1420	1/1:9,20:29:69.21:1085,69,0	1/1:8,15:23:48.10:723,48,0	1/1:22,0:22:51.35:470,51,0	1/1:5,16:21:54.11:817,54,0	1/1:8,15:23:54.18:866,54,0	1/1:3,15:18:51.15:800,51,0	0/0:19,0:19:45.13:0,45,990	0/0:36,0:36:71.88:0,72,1767	0/1:9,7:16:5.17:334,0,5	1/1:9,3:13:18:239,18,0	1/1:8,24:32:81.22:1246,81,0	1/1:6,1:6:5.93:65,6,0	1/1:6,9:15:36.07:523,36,0	1/1:19,0:19:33.80:371,34,0	1/1:10,0:10:17.83:202,18,0	1/1:5,15:20:51.14:776,51,0	0/1:29,2:31:15.96:16,0,1540	1/1:6,23:29:72.02:1085,72,0	0/0:23,0:23:63.21:0,63,1422
chr10	36400152	.	CTGTT	C	14854.37	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=16.239;DP=626;FS=9.120;HRun=0;HaplotypeScore=186.1726;InbreedingCoeff=0.9879;MQ=51.61;MQ0=0;MQRankSum=-12.946;QD=35.88;ReadPosRankSum=1.672;VQSLOD=4.3859;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,15:23:24.08:412,24,0	1/1:1,6:7:18.06:309,18,0	0/0:20,0:14:31.92:0,32,620	0/0:12,0:9:11.07:0,11,211	0/0:30,0:30:87.30:0,87,2178	1/1:5,15:20:27.09:458,27,0	1/1:5,11:16:33.11:566,33,0	1/1:11,17:28:48.13:730,48,0	0/0:29,0:29:78.27:0,78,1963	1/1:5,23:28:72.25:1234,72,0	1/1:5,17:22:51.17:868,51,0	1/1:1,19:20:54.18:921,54,0	1/1:2,25:27:63.22:1080,63,0	1/1:3,18:21:45.15:771,45,0	1/1:2,20:22:57.19:973,57,0	0/0:21,0:21:57.20:0,57,1423	0/0:40,0:40:99:0,102,2395	1/1:3,10:13:15.05:257,15,0	1/1:6,8:14:24.08:407,24,0	1/1:4,35:39:99:1623,99,0	1/1:0,8:8:21.07:349,21,0	1/1:1,15:16:42.06:685,42,0	1/1:3,13:16:30.07:513,30,0	1/1:1,14:15:32.79:541,33,0	1/1:4,17:21:42.14:720,42,0	0/0:33,0:33:84.28:0,84,2047	1/1:8,30:38:84.29:1440,84,0	0/0:27,0:27:72.25:0,72,1765
chr10	36401859	.	C	CTGTGTGTG	7067.48	PASS	AB=1.000;AC=49;AF=0.907;AN=54;BaseQRankSum=-0.202;DP=576;FS=6.848;HRun=0;HaplotypeScore=205.7622;InbreedingCoeff=0.3150;MQ=59.54;MQ0=8;MQRankSum=-0.994;QD=14.75;ReadPosRankSum=0.396;VQSLOD=3.1795;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:23:4.43:42,4,0	1/1:12,0:12:3.01:67,3,0	0/0:52,0:27:5.99:0,6,98	0/0:33,0:16:1.77:0,2,59	1/1:21,0:21:1.82:5,2,0	1/1:29,0:29:6.02:153,6,0	1/1:18,0:17:9.89:179,10,0	1/1:25,0:23:35.82:883,36,0	1/1:12,0:12:9.02:190,9,0	1/1:20,0:20:30.10:936,30,0	./.	1/1:19,3:22:6.02:243,6,0	1/1:13,0:13:15.05:458,15,0	1/1:8,0:8:6.02:200,6,0	1/1:25,0:25:15.04:277,15,0	1/1:22,0:22:3.01:98,3,0	0/1:15,0:14:0:0,0,0	1/1:10,0:10:2.99:67,3,0	1/1:19,0:19:13.86:317,14,0	1/1:16,0:15:6.02:113,6,0	1/1:10,0:9:2.97:20,3,0	1/1:18,0:18:3.01:44,3,0	1/1:21,3:25:11.54:488,12,0	1/1:24,5:33:28.92:860,29,0	1/1:23,0:21:6.02:184,6,0	1/1:28,0:36:42.55:937,43,0	1/1:13,0:12:6.02:187,6,0	1/1:9,0:9:3.01:118,3,0
chr10	36404580	.	A	AGT	2440.38	PASS	AB=0.883;AC=25;AF=0.481;AN=52;BaseQRankSum=-6.457;DP=618;FS=27.819;HRun=0;HaplotypeScore=148.5774;InbreedingCoeff=-0.1731;MQ=50.64;MQ0=9;MQRankSum=3.965;QD=5.33;ReadPosRankSum=-0.307;VQSLOD=1.0835;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:0.31:0,0,1	0/0:8,0:8:2.32:0,2,8	0/1:31,0:14:4.26:4,0,22	0/0:31,0:11:4.05:0,4,29	0/1:11,10:22:16:212,0,16	0/0:16,0:15:3.99:0,4,15	0/0:25,0:25:5.67:0,6,16	1/1:22,0:21:3.55:34,4,0	0/1:15,12:27:82.10:119,0,82	0/1:24,0:24:11.25:11,0,39	./.	1/1:13,0:13:1.21:21,1,0	1/1:15,0:15:3.01:17,3,0	1/1:22,0:20:1.25:3,1,0	0/1:24,0:24:1.43:1,0,9	0/1:17,14:30:41.92:637,0,42	0/1:26,11:36:31.60:777,0,32	0/1:15,0:15:11.33:11,0,22	0/1:25,0:24:12.48:14,0,12	0/0:15,0:15:2.29:0,2,17	0/1:53,0:52:0.63:7,0,1	./.	1/1:11,0:10:0.47:1,0,0	0/0:24,0:24:0.92:0,1,2	0/1:20,0:20:12.82:18,0,13	1/1:26,3:29:23.90:546,24,0	0/1:17,0:17:12.75:13,0,28	0/1:10,9:20:33.12:123,0,33
chr10	36404608	.	TGTCTGTGTGTGTGTGTGTGTGTGC	T	4103.76	PASS	AB=0.952;AC=17;AF=0.304;AN=56;BaseQRankSum=2.566;DP=611;FS=5.074;HRun=0;HaplotypeScore=302.1805;InbreedingCoeff=0.1880;MQ=44.22;MQ0=20;MQRankSum=-1.364;QD=14.10;ReadPosRankSum=-3.513;VQSLOD=1.4413;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:22,2:23:19:409,19,0	0/0:6,0:6:11.06:0,11,328	0/0:27,0:7:9.51:0,10,290	0/0:31,0:5:10.33:0,10,165	0/0:18,0:17:26.74:0,27,2316	0/1:10,0:9:4.81:155,0,5	1/1:20,2:22:11.16:283,11,0	0/1:20,0:17:99:138,0,528	0/0:26,0:25:44.14:0,44,2862	0/1:18,4:21:66.57:1225,0,67	1/1:1,7:8:3.01:70,3,0	0/0:17,0:16:15.90:0,16,183	0/0:11,0:10:15.23:0,15,344	0/1:22,0:19:34.47:34,0,226	1/1:18,4:22:15.44:732,15,0	0/0:35,0:34:79.31:0,79,5616	0/0:37,0:35:93.22:0,93,7338	0/1:8,5:13:19.31:951,0,19	0/0:17,0:14:33.61:0,34,648	0/0:15,0:14:15.05:0,15,467	0/1:59,0:54:26.23:26,0,885	0/0:10,0:9:6.02:0,6,203	0/0:14,0:13:2.49:0,2,93	0/1:31,0:31:45.64:46,0,402	0/1:21,0:21:31.11:31,0,653	0/0:34,0:33:97.16:0,97,5391	0/1:17,0:17:2.47:2,0,573	0/0:21,0:21:39.13:0,39,3319
chr10	36404620	.	TGTGTGTGTGTGCGC	T	4554.16	PASS	AB=1.000;AC=32;AF=0.571;AN=56;BaseQRankSum=4.586;DP=537;FS=6.285;HRun=0;HaplotypeScore=204.3668;InbreedingCoeff=0.4315;MQ=45.87;MQ0=19;MQRankSum=-0.591;QD=13.97;ReadPosRankSum=-1.830;VQSLOD=3.1346;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:17,0:16:7.17:19,0,7	1/1:7,0:7:8.72:196,9,0	0/0:21,0:6:6.02:0,6,70	0/0:24,0:3:0:0,0,1	0/0:15,0:14:24.08:0,24,1452	0/1:8,0:7:13.03:69,0,13	0/1:14,0:14:21.25:21,0,49	1/1:16,0:13:23.88:298,24,0	0/0:26,0:25:47.88:0,48,1964	0/1:20,0:19:45.08:349,0,45	0/0:10,0:10:3.36:0,3,38	1/1:15,0:14:14.46:220,14,0	1/1:10,0:9:14.58:204,15,0	1/1:19,1:17:11.26:144,11,0	0/1:16,0:16:21.81:257,0,22	0/0:34,0:33:74.98:0,75,3496	0/0:35,0:33:91.55:0,92,4713	0/1:15,0:15:57.18:313,0,57	1/1:9,0:7:10.54:291,11,0	1/1:17,0:16:6.01:135,6,0	1/1:57,0:52:50.59:680,51,0	1/1:9,1:9:6.01:74,6,0	1/1:12,0:12:1.55:4,2,0	1/1:27,1:28:30:405,30,0	1/1:20,0:20:26.91:423,27,0	0/0:30,0:29:72.19:0,72,3030	1/1:12,2:14:11.98:453,12,0	0/0:16,0:16:39.13:0,39,2054
chr10	36404622	.	TGTGTGTGTGCGC	T	3994.39	PASS	AB=1.000;AC=31;AF=0.554;AN=56;BaseQRankSum=4.940;DP=529;FS=7.300;HRun=0;HaplotypeScore=193.2928;InbreedingCoeff=0.4504;MQ=47.56;MQ0=17;MQRankSum=1.158;QD=12.44;ReadPosRankSum=-1.032;VQSLOD=1.4216;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:17,0:16:9.87:11,0,10	1/1:5,1:6:8.95:150,9,0	0/0:20,0:6:10.98:0,11,99	0/0:23,0:3:0:0,0,1	0/0:15,0:14:24.08:0,24,1226	0/1:10,0:9:31.84:55,0,32	0/1:14,0:14:7.29:7,0,48	1/1:15,0:12:23.68:297,24,0	0/0:27,0:26:47.74:0,48,1729	0/1:21,0:20:76.17:291,0,76	0/0:10,0:10:3.38:0,3,39	1/1:16,0:15:11.76:209,12,0	1/1:10,0:9:14.86:183,15,0	1/1:18,1:16:9.21:120,9,0	0/1:17,0:17:20.92:217,0,21	0/0:33,0:32:73.07:0,73,3036	0/0:36,0:34:93.31:0,93,4157	0/1:15,0:15:58.78:253,0,59	1/1:7,1:7:12.04:252,12,0	1/1:15,1:15:6:88,6,0	1/1:55,0:51:47.58:579,48,0	1/1:8,0:8:6.01:74,6,0	0/1:12,0:12:0.01:1,0,0	1/1:27,0:27:30:405,30,0	1/1:19,1:20:28.77:383,29,0	0/0:28,0:27:68.58:0,69,2580	1/1:14,1:15:16.54:417,17,0	0/0:16,0:16:39.13:0,39,1755
chr10	36404628	.	TGTGCGC	T	4024.73	PASS	AB=0.947;AC=30;AF=0.556;AN=54;BaseQRankSum=2.519;DP=487;FS=8.376;HRun=0;HaplotypeScore=151.0504;InbreedingCoeff=0.4340;MQ=50.22;MQ0=14;MQRankSum=-2.574;QD=13.33;ReadPosRankSum=-0.664;VQSLOD=2.4143;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:18,0:17:10.46:10,0,12	1/1:4,0:4:6.02:92,6,0	0/0:12,0:4:11.15:0,11,72	./.	0/0:15,0:14:20.06:0,20,710	0/1:8,0:7:11.57:18,0,12	0/1:17,0:17:6.48:6,0,34	1/1:14,0:12:30.09:416,30,0	0/0:22,0:22:41.87:0,42,1150	0/1:24,0:23:20.21:138,0,20	0/0:11,0:11:0.50:0,1,10	1/1:16,0:15:26.20:342,26,0	1/1:11,0:10:13.52:266,14,0	1/1:13,0:12:8.77:136,9,0	0/1:20,0:20:16.97:102,0,17	0/0:34,0:33:48.21:0,48,1931	0/0:34,0:32:95.99:0,96,2630	0/1:16,0:16:33.49:118,0,33	1/1:9,0:7:15.05:256,15,0	0/1:12,0:11:0.87:23,0,1	1/1:47,0:44:39.50:716,39,0	1/1:8,0:8:9.03:148,9,0	0/1:3,8:11:0:0,0,0	1/1:29,0:29:36.56:514,37,0	1/1:16,0:16:16.82:365,17,0	0/0:24,0:23:52.87:0,53,1625	1/1:9,0:9:21.07:357,21,0	0/0:16,0:16:42.12:0,42,1099
chr10	36404630	.	TGCGC	T	4072.01	PASS	AB=1.000;AC=34;AF=0.630;AN=54;BaseQRankSum=2.656;DP=481;FS=5.406;HRun=0;HaplotypeScore=140.4270;InbreedingCoeff=0.5233;MQ=50.41;MQ0=13;MQRankSum=-1.689;QD=13.09;ReadPosRankSum=-1.202;VQSLOD=2.9598;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:17:3.87:21,4,0	1/1:4,0:4:6.02:79,6,0	0/0:12,0:4:11.15:0,11,72	./.	0/0:14,0:13:20.19:0,20,581	0/1:7,0:7:9.62:11,0,10	0/1:17,0:17:6.30:6,0,33	1/1:4,11:13:33.09:466,33,0	0/0:23,0:23:44.93:0,45,1024	0/1:24,0:23:4.11:102,0,4	1/1:11,0:11:3.84:10,4,0	1/1:16,0:15:26.78:360,27,0	1/1:10,0:9:19.88:280,20,0	1/1:11,0:10:8.54:143,9,0	0/1:22,0:22:16.78:60,0,17	0/0:33,0:32:49.63:0,50,1654	0/0:34,0:32:96.32:0,96,2248	0/1:17,0:17:32.44:62,0,32	1/1:3,7:8:18.05:268,18,0	1/1:2,9:10:2.88:15,3,0	1/1:44,0:42:50.29:804,50,0	1/1:8,0:8:9.03:148,9,0	0/1:11,0:11:0:0,0,0	1/1:29,0:29:36.04:508,36,0	1/1:17,0:17:15.13:411,15,0	0/0:21,0:21:49.84:0,50,1311	1/1:9,0:9:21.07:317,21,0	0/0:16,0:16:42.12:0,42,965
chr10	36404723	.	GTGTT	G	1415.14	PASS	AB=0.993;AC=21;AF=0.375;AN=56;BaseQRankSum=6.803;DP=670;FS=6.731;HRun=0;HaplotypeScore=189.0892;InbreedingCoeff=-0.3753;MQ=48.92;MQ0=19;MQRankSum=-1.265;QD=3.14;ReadPosRankSum=7.483;VQSLOD=1.3348;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:26:21.33:0,21,166	0/1:6,0:6:32.32:32,0,85	0/0:28,0:7:4.03:0,4,102	0/1:28,0:11:8.06:8,0,42	0/0:22,0:20:56.17:0,56,1032	0/1:11,0:11:29.21:29,0,87	0/1:29,0:29:99:125,0,172	0/1:20,0:18:64.76:91,0,65	0/0:35,0:35:93.04:0,93,1674	0/1:33,0:30:99:211,0,243	0/1:10,0:9:0.88:1,0,86	0/1:19,2:21:37.49:167,0,37	0/1:22,0:21:54.10:54,0,177	0/1:17,0:17:0.53:139,0,1	0/1:29,1:29:85.08:85,0,165	0/0:27,0:26:73.97:0,74,1427	0/0:33,0:31:80.35:0,80,1726	0/1:26,0:26:99:204,0,131	0/1:18,0:12:38.57:39,0,166	0/1:12,0:10:22.83:55,0,23	0/1:86,0:75:39.51:40,0,478	0/1:12,0:11:7.61:8,0,68	0/1:12,0:10:13.60:69,0,14	0/1:41,1:41:68.99:69,0,139	0/1:7,0:7:39.84:40,0,41	0/0:30,0:29:68.47:0,68,1370	1/1:9,0:9:15.88:111,16,0	0/0:15,0:15:23.98:0,24,874
chr10	36404727	.	TTGTG	T	4168.01	PASS	AB=0.864;AC=32;AF=0.571;AN=56;BaseQRankSum=-0.042;DP=636;FS=2.168;HRun=0;HaplotypeScore=171.2817;InbreedingCoeff=0.2846;MQ=46.61;MQ0=23;MQRankSum=-1.945;QD=9.76;ReadPosRankSum=3.220;VQSLOD=3.0402;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:22,4:23:28.33:34,0,28	0/1:4,2:6:40.90:43,0,41	0/0:27,0:6:6.02:0,6,107	0/0:23,0:8:2.80:0,3,13	0/0:21,0:19:39.13:0,39,847	1/1:8,2:10:9.03:120,9,0	0/1:24,4:28:26.08:326,0,26	0/1:17,0:15:60.38:299,0,60	0/0:34,0:34:71.99:0,72,1380	0/1:26,5:27:99:391,0,169	1/1:10,0:9:6.01:74,6,0	1/1:18,2:20:20.91:255,21,0	0/1:18,3:21:31.33:187,0,31	1/1:11,4:15:26.95:378,27,0	1/1:25,3:27:9.10:308,9,0	0/0:27,0:26:53.87:0,54,1008	0/0:33,0:30:66.18:0,66,1395	0/1:17,7:25:72.50:508,0,73	0/1:15,2:11:32.87:128,0,33	1/1:10,1:9:8.17:63,8,0	1/1:68,16:72:28.24:364,28,0	1/1:10,1:10:3.46:25,3,0	1/1:9,1:8:9.03:143,9,0	1/1:32,6:38:20.07:266,20,0	1/1:7,0:7:2.99:36,3,0	0/0:29,0:28:51.13:0,51,956	1/1:5,4:9:16.25:219,16,0	0/0:14,0:14:36.12:0,36,778
chr10	36404771	.	CGTGTATG	C	3770.27	PASS	AB=0.634;AC=22;AF=0.393;AN=56;BaseQRankSum=3.689;DP=392;FS=16.471;HRun=0;HaplotypeScore=158.7818;InbreedingCoeff=-0.0363;MQ=44.44;MQ0=2;MQRankSum=-7.397;QD=15.08;ReadPosRankSum=2.642;VQSLOD=2.2069;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:2,5:11:13.69:208,0,14	0/1:1,2:6:13.50:112,0,14	0/0:20,0:9:26.66:0,27,556	0/0:28,0:17:51.17:0,51,1548	0/0:4,0:4:9.03:0,9,182	1/1:0,0:5:0.47:1,0,0	0/1:1,10:18:80.63:317,0,81	1/1:2,5:6:11.51:315,12,0	0/0:26,0:26:72:0,72,1703	0/1:5,2:7:32.11:261,0,32	0/0:0,1:3:2.49:0,2,9	0/1:4,12:22:77.98:184,0,78	0/1:4,10:17:9.31:796,0,9	0/1:5,14:26:99:628,0,126	0/1:4,7:14:15.40:322,0,15	0/0:13,0:13:27.98:0,28,761	0/0:22,0:21:51.35:0,51,1279	0/1:2,3:14:74.99:75,0,212	1/1:0,0:1:3.01:38,3,0	1/1:0,5:7:3.14:62,3,0	0/1:15,16:45:36.86:37,0,127	0/0:0,2:8:2.15:0,2,8	0/0:0,0:2:2.63:0,3,14	0/1:4,6:20:0.21:0,0,0	0/1:3,3:8:18.97:71,0,19	0/0:9,0:9:23.63:0,24,449	1/1:1,3:7:1.09:343,1,0	0/0:6,0:6:18.05:0,18,364
chr10	36404774	.	GTA	G	1110.22	PASS	AB=0.983;AC=32;AF=0.571;AN=56;BaseQRankSum=3.754;DP=422;FS=5.697;HRun=0;HaplotypeScore=157.5424;InbreedingCoeff=-0.1735;MQ=43.83;MQ0=3;MQRankSum=-5.100;QD=3.06;ReadPosRankSum=-0.308;VQSLOD=2.1224;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:13,0:12:12.53:35,0,13	1/1:6,0:6:4.23:32,4,0	0/0:21,0:10:23.97:0,24,290	0/0:28,0:17:34.21:0,34,596	0/0:2,0:2:2.99:0,3,23	0/1:6,0:6:0:0,0,0	0/1:21,0:19:12.66:54,0,13	0/1:8,0:7:32.19:47,0,32	0/1:26,2:28:99:182,0,244	0/1:9,0:7:49.58:50,0,56	1/1:3,0:3:1.55:4,2,0	0/1:24,0:23:17.55:18,0,22	1/1:16,1:17:31.09:163,31,0	0/1:26,0:26:67.53:78,0,68	1/1:16,0:14:11.91:60,12,0	0/1:13,1:14:42.39:42,0,132	0/1:23,1:22:99:113,0,181	0/1:16,0:16:61.23:61,0,87	1/1:5,0:4:8.76:52,9,0	0/0:8,0:8:0.09:0,0,1	0/1:60,0:53:7.64:8,0,61	1/1:8,0:8:1.55:4,2,0	1/1:2,0:2:2.44:6,2,0	0/1:24,0:23:0.64:1,0,1	0/1:10,0:10:4:11,0,4	0/1:9,1:9:62.91:88,0,63	1/1:7,0:7:14.45:79,14,0	0/1:6,0:6:29.53:74,0,30
chr10	36404806	.	C	CTCG	119.31	PASS	AB=0.965;AC=7;AF=0.125;AN=56;BaseQRankSum=3.878;DP=637;FS=2.538;HRun=0;HaplotypeScore=217.2936;InbreedingCoeff=-0.0586;MQ=39.99;MQ0=30;MQRankSum=-2.591;QD=0.90;ReadPosRankSum=-3.191;VQSLOD=2.3963;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,1:19:13.82:0,14,299	0/0:5,0:5:6.02:0,6,102	0/1:23,0:8:1.92:2,0,223	0/0:31,0:15:30.03:0,30,441	0/0:4,0:4:5.74:0,6,102	0/0:6,0:6:3.47:0,3,52	0/1:28,3:27:99:102,0,382	0/0:24,0:21:42.58:0,43,876	0/0:29,0:29:75.24:0,75,1263	0/1:18,1:17:26.57:27,0,604	0/0:4,0:4:2.99:0,3,45	0/0:38,0:37:48.03:0,48,739	0/0:27,0:27:38.18:0,38,587	0/0:38,0:37:50.98:0,51,831	0/1:24,1:24:82.77:83,0,392	0/0:19,0:19:42.04:0,42,714	0/1:21,0:19:12.46:12,0,599	0/0:16,0:14:8.37:0,8,414	0/0:24,0:17:42.12:0,42,669	0/0:15,0:13:9.02:0,9,114	0/0:114,0:96:41.93:0,42,845	0/0:24,0:19:5.21:0,5,101	0/0:8,0:8:3:0,3,52	0/0:32,0:30:7.63:0,8,136	1/1:13,0:13:0.43:1,0,0	0/0:16,0:15:36.09:0,36,551	0/0:7,0:7:11.97:0,12,203	0/0:2,0:2:6.02:0,6,96
chr10	36404808	.	CTGTGT	C	99.84	PASS	AB=0.930;AC=8;AF=0.143;AN=56;BaseQRankSum=5.727;DP=655;FS=4.712;HRun=0;HaplotypeScore=213.4677;InbreedingCoeff=-0.0723;MQ=39.74;MQ0=30;MQRankSum=-3.744;QD=0.67;ReadPosRankSum=-3.307;VQSLOD=1.6274;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,3:21:20.97:0,21,585	0/0:6,0:6:6.89:0,7,151	0/1:22,0:7:2.86:3,0,351	0/0:28,0:12:36.07:0,36,697	0/0:4,0:4:5.74:0,6,179	0/0:6,0:6:2.09:0,2,84	0/1:26,2:25:89.26:89,0,683	0/0:26,0:22:66.18:0,66,1326	0/0:30,0:30:84.29:0,84,2263	0/1:20,0:18:4.66:5,0,991	0/0:4,0:4:4.51:0,5,104	0/0:38,0:37:43.97:0,44,1096	0/0:30,0:30:47.27:0,47,1272	0/0:40,0:38:50.97:0,51,1401	0/1:18,5:22:91.31:91,0,689	0/0:20,0:20:42.08:0,42,1170	0/1:24,1:23:8.48:8,0,1234	0/1:14,2:14:7.63:8,0,586	0/0:24,0:17:42.14:0,42,1047	0/0:15,0:13:7.58:0,8,215	0/0:116,0:98:53.36:0,53,1182	0/0:24,0:19:6.49:0,6,154	0/0:9,0:9:1.31:0,1,48	0/0:33,0:31:8.99:0,9,232	1/1:15,0:14:0.42:1,0,0	0/0:18,0:17:48.16:0,48,1261	0/0:7,0:7:12.04:0,12,278	0/0:2,0:2:6.02:0,6,162
chr10	36404816	.	CTGTGTGTTTGTGTGTGTGTG	C	781.83	PASS	AB=0.976;AC=15;AF=0.268;AN=56;BaseQRankSum=1.361;DP=676;FS=4.333;HRun=0;HaplotypeScore=307.2692;InbreedingCoeff=-0.2466;MQ=38.45;MQ0=31;MQRankSum=-4.787;QD=2.06;ReadPosRankSum=-7.029;VQSLOD=0.7304;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:21:5.15:5,0,553	0/1:5,0:5:12.99:13,0,165	0/0:19,0:6:9.03:0,9,283	0/0:26,0:11:24.08:0,24,748	0/0:6,0:5:10.76:0,11,287	0/1:5,1:6:48.83:49,0,115	0/1:29,0:25:99:124,0,751	0/1:31,0:26:37.74:38,0,1060	0/0:33,0:33:87.12:0,87,3782	0/1:20,0:18:5.33:5,0,1095	0/0:4,0:4:4.56:0,5,118	0/0:39,0:38:4.33:0,4,885	0/0:32,0:32:25.48:0,25,916	0/0:42,0:40:55.42:0,55,1409	0/1:20,3:22:99:417,0,560	0/0:22,0:22:56.93:0,57,2399	0/1:24,0:22:1.14:1,0,2011	0/1:16,0:15:99:131,0,716	0/1:25,0:17:13.87:14,0,776	0/0:16,0:14:1.42:0,1,216	0/1:116,0:100:92.94:93,0,807	0/0:25,0:20:2.09:0,2,7	0/0:10,0:10:0.86:0,1,2	0/1:34,0:32:19.37:19,0,223	1/1:16,0:15:1.77:4,2,0	0/0:21,0:20:51.01:0,51,1676	0/1:7,0:7:3.88:4,0,217	0/0:2,0:2:3.01:0,3,138
chr10	36404824	.	TTGTG	T	2302.53	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=-6.815;DP=632;FS=15.751;HRun=0;HaplotypeScore=189.5934;InbreedingCoeff=0.5189;MQ=35.76;MQ0=33;MQRankSum=4.450;QD=11.40;ReadPosRankSum=-2.321;VQSLOD=1.6580;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:17:11.20:0,11,152	0/0:5,0:5:2.99:0,3,39	0/0:17,0:2:3.01:0,3,42	0/0:26,0:10:8.24:0,8,90	1/1:4,2:5:2.97:20,3,0	1/1:6,0:6:0.44:1,0,0	0/0:22,0:18:13.15:0,13,234	0/0:27,0:21:27.27:0,27,248	1/1:23,10:33:55.56:826,56,0	0/0:17,0:16:15.02:0,15,194	0/0:3,0:3:2.64:0,3,45	0/0:37,0:36:14.46:0,14,208	0/0:28,0:30:32.64:0,33,374	0/0:41,0:40:35.56:0,36,389	0/1:21,0:20:30.34:30,0,195	1/1:13,8:22:41.96:530,42,0	1/1:19,5:22:32.96:457,33,0	0/1:16,0:14:30.86:31,0,158	0/0:20,0:14:18.06:0,18,268	0/0:13,0:12:5.82:0,6,86	0/0:108,0:94:14.22:0,14,200	0/1:23,0:18:0.22:0,0,0	1/1:9,0:9:0.98:2,1,0	0/0:32,0:32:5.88:0,6,62	1/1:15,0:14:0.47:1,0,0	1/1:7,19:23:38.90:521,39,0	0/0:6,0:6:3.01:0,3,37	1/1:1,0:1:3.01:47,3,0
chr10	36404828	.	G	GTGTC	2791.62	PASS	AB=0.986;AC=32;AF=0.571;AN=56;BaseQRankSum=-0.505;DP=647;FS=2.421;HRun=0;HaplotypeScore=205.8066;InbreedingCoeff=0.0125;MQ=35.62;MQ0=33;MQRankSum=-2.071;QD=4.73;ReadPosRankSum=-0.766;VQSLOD=2.6774;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:20:11.53:62,0,12	0/0:5,0:5:2.96:0,3,19	0/0:18,0:2:5.39:0,5,24	0/0:25,0:9:23:0,23,188	0/0:7,0:6:8.95:0,9,67	1/1:5,0:5:5.91:42,6,0	0/1:32,0:28:22.22:153,0,22	0/1:26,0:20:71.02:228,0,71	0/1:32,0:32:8.80:9,0,507	1/1:22,0:21:9.01:279,9,0	1/1:2,0:2:2.98:22,3,0	1/1:35,1:35:22.20:254,22,0	0/1:28,1:30:8.71:399,0,9	1/1:39,1:39:34.57:446,35,0	0/1:24,0:23:0.14:157,0,0	0/1:21,0:21:0.55:1,0,321	0/1:24,0:22:64.15:64,0,224	0/1:18,0:17:22.17:170,0,22	0/1:21,0:14:72.80:118,0,73	1/1:15,0:12:7.92:129,8,0	0/1:100,4:87:0.15:225,0,0	0/1:20,1:16:0.17:1,0,0	1/1:9,0:9:2.73:25,3,0	1/1:30,4:32:5.74:103,6,0	0/1:16,1:15:0.28:1,0,0	0/1:26,0:22:27.38:27,0,312	1/1:6,1:7:5.48:30,5,0	0/0:2,0:2:3.01:0,3,47
chr10	36404830	.	G	GTC	2411.82	PASS	AB=0.885;AC=28;AF=0.500;AN=56;BaseQRankSum=-0.304;DP=641;FS=8.694;HRun=0;HaplotypeScore=194.5301;InbreedingCoeff=0.1562;MQ=35.88;MQ0=35;MQRankSum=-3.524;QD=4.99;ReadPosRankSum=1.105;VQSLOD=1.7664;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:18,7:21:42.25:94,0,42	0/0:5,0:5:2.96:0,3,19	0/0:17,0:2:5.95:0,6,64	0/0:24,0:9:23.86:0,24,222	0/0:7,0:6:8.89:0,9,62	0/1:8,0:7:10.77:18,0,11	0/1:26,6:28:24.51:166,0,25	0/1:13,11:17:99:250,0,107	0/0:32,0:32:79.53:0,80,632	0/1:23,1:23:37.31:242,0,37	1/1:2,0:2:2.63:57,3,0	1/1:34,0:34:21.78:244,22,0	0/1:28,1:29:10.21:221,0,10	1/1:36,4:39:17.40:314,17,0	0/1:18,6:23:15.64:250,0,16	0/0:21,0:21:53.35:0,53,396	0/0:24,0:21:27.78:0,28,353	0/1:19,1:19:39.69:140,0,40	0/1:22,1:14:97.56:111,0,98	1/1:14,0:11:8.96:134,9,0	1/1:97,2:83:7.48:232,7,0	0/1:16,2:16:0.11:0,0,0	1/1:9,0:9:1.50:23,1,0	1/1:31,2:31:6.03:56,6,0	1/1:18,0:15:0.19:0,0,0	0/0:26,0:22:51.62:0,52,406	1/1:7,0:7:5.98:31,6,0	0/0:2,0:2:5.98:0,6,55
chr10	36404864	.	CTCG	C	850.67	PASS	AB=0.820;AC=16;AF=0.348;AN=46;BaseQRankSum=8.422;DP=371;FS=22.226;HRun=0;HaplotypeScore=132.8088;InbreedingCoeff=0.5397;MQ=53.75;MQ0=11;MQRankSum=-6.729;QD=6.97;ReadPosRankSum=-0.962;VQSLOD=1.4799;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,4:27:14.81:0,15,334	./.	0/0:25,0:18:45.23:0,45,914	0/0:28,0:13:31.28:0,31,576	0/0:10,0:10:23.65:0,24,478	0/0:7,0:7:15.05:0,15,311	0/1:20,2:22:34.29:34,0,545	./.	0/0:28,0:27:72.23:0,72,1438	0/0:20,1:20:3.78:0,4,1038	0/0:6,0:6:9.03:0,9,202	1/1:2,8:10:19.69:210,20,0	1/1:7,4:11:30.09:394,30,0	1/1:3,11:14:20.85:269,21,0	0/0:11,4:15:12.03:0,12,218	0/0:22,0:22:60.14:0,60,1160	0/0:23,1:23:9.41:0,9,1082	0/1:11,1:11:27.01:27,0,486	./.	./.	0/1:10,13:21:0.05:0,0,1	0/1:3,1:4:0.03:0,0,0	./.	1/1:6,6:11:2.29:21,2,0	1/1:6,5:10:2.69:39,3,0	0/0:25,0:24:54.17:0,54,1067	1/1:3,0:3:1.55:4,2,0	0/0:1,0:1:3.01:0,3,69
chr10	36404875	.	GTC	G	293.80	PASS	AB=0.841;AC=17;AF=0.315;AN=54;BaseQRankSum=3.934;DP=477;FS=3.575;HRun=0;HaplotypeScore=163.6477;InbreedingCoeff=0.3166;MQ=50.66;MQ0=4;MQRankSum=-1.571;QD=1.71;ReadPosRankSum=-3.919;VQSLOD=1.6788;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:11.84:0,12,175	1/1:8,0:8:4.50:28,5,0	0/0:25,0:20:26.82:0,27,540	0/0:22,1:11:13.20:0,13,357	0/0:11,0:10:0.08:0,0,263	0/0:8,0:8:15.01:0,15,219	0/0:34,0:34:24.02:0,24,521	./.	0/0:35,0:32:70.42:0,70,1051	0/0:22,0:21:41.35:0,41,595	0/0:8,0:8:8.53:0,9,129	0/1:19,4:23:89.44:89,0,111	0/1:16,0:16:9.14:38,0,9	0/1:19,2:21:3.05:33,0,3	0/0:23,0:23:13.30:0,13,156	0/0:25,0:25:59.99:0,60,810	0/0:27,0:26:54.71:0,55,714	0/0:15,0:14:13.17:0,13,451	0/1:1,1:1:0:0,0,0	0/0:1,1:2:2.04:0,2,6	1/1:42,3:37:0.90:40,1,0	1/1:6,2:8:2.62:25,3,0	0/1:1,2:3:0:0,0,0	1/1:21,3:23:0.61:38,1,0	0/1:10,2:12:14.28:28,0,14	0/0:18,0:18:54.08:0,54,844	1/1:6,0:6:8.42:99,8,0	0/1:4,0:4:21.72:22,0,77
chr10	36404887	.	CTG	C	2617.22	PASS	AB=0.921;AC=32;AF=0.571;AN=56;BaseQRankSum=-5.780;DP=632;FS=54.835;HRun=0;HaplotypeScore=177.2915;InbreedingCoeff=-0.1571;MQ=46.67;MQ0=8;MQRankSum=2.844;QD=5.02;ReadPosRankSum=5.896;VQSLOD=1.0790;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:29:20.78:21,0,52	1/1:14,0:14:2.05:75,2,0	0/0:30,0:19:9:0,9,111	0/0:27,0:7:3.01:0,3,43	1/1:7,3:9:12.18:118,12,0	1/1:9,0:9:2.23:13,2,0	0/0:40,0:40:5.63:0,6,111	0/1:7,0:11:5.01:5,0,135	1/1:18,18:34:29.37:327,29,0	0/1:26,0:25:52.67:53,0,91	1/1:9,0:9:2.24:11,2,0	0/1:31,3:33:62.79:266,0,63	0/1:19,0:19:10.30:172,0,10	0/1:35,1:35:11.64:138,0,12	0/1:33,0:33:3.60:22,0,4	0/1:11,16:27:3.22:373,0,3	1/1:8,21:29:50.81:556,51,0	0/1:24,0:23:37.42:37,0,66	0/0:8,0:6:9.01:0,9,95	0/0:3,1:3:2.04:0,2,6	0/1:73,1:65:65.48:65,0,180	1/1:8,1:9:1.65:33,2,0	1/1:6,0:5:3:25,3,0	0/1:27,2:27:53.60:119,0,54	0/1:19,1:19:17.63:18,0,38	0/1:15,3:19:6.15:179,0,6	1/1:5,2:7:5.04:84,5,0	0/1:5,0:5:8.59:63,0,9
chr10	36404889	.	G	GTGTC	1901.19	PASS	AB=0.928;AC=18;AF=0.333;AN=54;BaseQRankSum=0.951;DP=656;FS=1.068;HRun=0;HaplotypeScore=209.9064;InbreedingCoeff=-0.0980;MQ=46.08;MQ0=9;MQRankSum=2.114;QD=4.99;ReadPosRankSum=-1.501;VQSLOD=2.5098;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:21.73:0,22,213	1/1:13,1:14:2.73:80,3,0	0/0:30,0:18:9.71:0,10,230	0/0:28,0:7:11.89:0,12,102	0/0:10,0:9:3.88:0,4,122	0/0:9,0:9:14.78:0,15,127	0/1:41,0:41:44.90:45,0,219	0/1:16,0:14:31.87:32,0,218	0/0:36,0:33:51.90:0,52,482	0/0:25,0:24:12.26:0,12,388	0/0:10,0:10:5.54:0,6,70	0/1:30,7:35:18.02:663,0,18	0/1:15,4:18:16.90:406,0,17	0/1:28,8:35:17.28:362,0,17	0/1:35,0:34:8.88:9,0,112	0/0:27,0:27:59.86:0,60,622	0/0:30,0:29:59.89:0,60,571	0/0:24,0:23:19.71:0,20,280	0/0:11,0:6:8.94:0,9,75	./.	0/1:81,3:71:77.53:78,0,273	1/1:9,1:9:2.30:34,2,0	1/1:6,0:5:3:25,3,0	0/1:31,1:30:39.07:84,0,39	0/1:17,4:20:73.05:73,0,82	0/1:19,0:19:19.47:19,0,355	0/1:6,1:7:1.38:138,0,1	0/1:4,0:4:7.58:8,0,73
chr10	36404905	.	GTGTGTGCC	G	2603.15	PASS	AB=0.929;AC=13;AF=0.232;AN=56;BaseQRankSum=-7.178;DP=699;FS=1.695;HRun=0;HaplotypeScore=221.5866;InbreedingCoeff=-0.1355;MQ=44.53;MQ0=12;MQRankSum=-0.968;QD=9.71;ReadPosRankSum=-0.582;VQSLOD=2.7510;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:25,3:26:99:153,0,136	0/0:15,0:15:29.21:0,29,498	0/1:21,0:11:33.25:33,0,192	0/1:32,0:6:11.53:12,0,64	0/1:12,0:10:28.61:29,0,282	1/1:6,2:8:9.02:175,9,0	0/1:33,6:39:99:378,0,500	0/0:22,0:20:60.19:0,60,1188	0/0:39,0:37:74.42:0,74,1262	0/1:18,5:22:99:739,0,255	0/1:9,2:11:39.45:163,0,39	0/0:42,0:40:99:0,99,1923	0/0:18,0:17:41.92:0,42,982	0/0:38,0:36:53.93:0,54,921	0/1:26,3:28:41.39:443,0,41	0/1:28,0:28:11.63:12,0,1001	0/0:35,0:34:70.20:0,70,1448	0/1:19,3:21:99:608,0,426	0/0:10,0:6:17.93:0,18,327	0/0:5,0:4:4.87:0,5,77	0/0:108,0:94:91.85:0,92,1593	0/0:13,0:11:8.46:0,8,126	0/0:9,0:7:6.39:0,6,125	0/0:34,0:33:43.66:0,44,761	0/0:23,0:21:34.42:0,34,548	0/1:13,0:13:12.20:12,0,605	0/0:11,0:11:23.61:0,24,417	0/0:9,0:8:23.87:0,24,384
chr10	36404911	.	GCC	G	1361.83	PASS	AB=0.943;AC=11;AF=0.196;AN=56;BaseQRankSum=-1.061;DP=719;FS=0.000;HRun=2;HaplotypeScore=189.4743;InbreedingCoeff=-0.0658;MQ=45.55;MQ0=15;MQRankSum=-2.009;QD=5.34;ReadPosRankSum=2.245;VQSLOD=-0.1884;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:27,2:26:99:111,0,130	0/0:15,0:15:32.05:0,32,358	0/1:26,0:13:18:18,0,233	0/1:32,0:8:5.56:6,0,131	0/0:11,0:9:20.55:0,21,197	1/1:7,1:8:5.99:67,6,0	0/1:34,4:38:99:205,0,308	0/0:30,0:26:76.47:0,76,1211	0/1:38,1:37:13.34:13,0,736	0/1:21,2:22:99:406,0,203	0/1:9,0:9:55.22:128,0,55	0/0:44,0:41:85.10:0,85,989	0/0:21,0:20:39.45:0,39,379	0/0:40,0:38:53.53:0,54,496	0/1:25,3:27:71.57:219,0,72	0/0:26,0:26:20.29:0,20,453	0/0:36,0:35:70.78:0,71,701	0/1:19,4:22:99:335,0,210	0/0:11,0:7:18.06:0,18,326	0/0:5,0:5:7.88:0,8,101	0/0:107,0:93:98.08:0,98,1379	0/0:13,0:11:8.51:0,9,69	0/0:12,0:10:5.55:0,6,75	0/0:32,3:34:38.89:0,39,468	0/0:24,0:22:34.42:0,34,476	0/0:14,0:14:39.07:0,39,500	0/0:10,0:10:22.35:0,22,214	0/0:10,0:9:20.41:0,20,305
chr10	36404991	.	CTG	C	9323.14	PASS	AB=0.942;AC=32;AF=0.571;AN=56;BaseQRankSum=6.573;DP=1005;FS=9.988;HRun=0;HaplotypeScore=296.1856;InbreedingCoeff=0.5575;MQ=60.82;MQ0=17;MQRankSum=-1.490;QD=13.96;ReadPosRankSum=1.986;VQSLOD=3.4753;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:46,1:47:19:146,0,19	1/1:0,6:6:12.04:155,12,0	0/1:75,0:27:6.84:7,0,261	0/0:88,0:35:24.20:0,24,469	0/0:17,0:17:45.15:0,45,753	0/0:22,2:24:18.74:0,19,92	0/1:34,1:35:7.67:73,0,8	1/1:13,19:26:38.66:642,39,0	0/0:52,0:52:99:0,129,2065	0/1:45,6:49:63.47:268,0,63	0/1:7,1:8:21.71:31,0,22	1/1:11,25:36:66.12:840,66,0	1/1:0,42:42:93.12:1191,93,0	1/1:12,27:39:47.93:591,48,0	0/0:35,2:37:33.20:0,33,161	0/0:26,0:26:75.24:0,75,1235	0/0:48,0:48:99:0,131,2113	0/1:25,2:27:31.68:152,0,32	1/1:13,8:19:27.07:335,27,0	1/1:3,18:21:27.06:351,27,0	1/1:34,62:96:99:2310,164,0	1/1:2,23:24:30.38:391,30,0	1/1:2,14:15:3.01:39,3,0	1/1:18,28:45:78.10:983,78,0	1/1:3,15:18:18.53:235,19,0	0/0:32,0:32:69.16:0,69,1025	1/1:4,21:25:45.15:584,45,0	0/0:11,0:11:27.09:0,27,434
chr10	36405101	.	CTG	C	4634.66	PASS	AB=0.795;AC=31;AF=0.554;AN=56;BaseQRankSum=13.646;DP=885;FS=0.736;HRun=0;HaplotypeScore=255.5185;InbreedingCoeff=0.7333;MQ=51.94;MQ0=5;MQRankSum=-5.059;QD=9.99;ReadPosRankSum=0.756;VQSLOD=4.1583;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:12,0:19:1.49:8,0,1	1/1:3,5:8:15.04:172,15,0	0/0:39,0:21:35.17:0,35,485	0/0:39,0:20:31.57:0,32,365	0/0:19,0:19:33.04:0,33,517	1/1:10,0:16:13.14:59,13,0	0/1:17,0:21:10.92:11,0,20	1/1:44,4:47:6.52:188,7,0	0/0:56,0:56:99:0,128,1991	0/1:17,0:22:27.50:28,0,59	1/1:1,0:12:0.75:2,1,0	0/0:60,2:62:46.84:0,47,1762	1/1:9,37:47:86.52:932,87,0	1/1:16,38:54:25.90:771,26,0	1/1:7,0:21:5.51:62,6,0	0/0:36,2:38:22.35:0,22,1314	0/0:32,0:32:86.65:0,87,1288	1/1:4,0:6:5.31:25,5,0	1/1:12,6:16:24.49:259,24,0	1/1:9,14:23:27.23:360,27,0	1/1:46,33:78:46.18:740,46,0	1/1:10,20:29:29.92:323,30,0	0/0:21,0:21:24.02:0,24,369	0/0:62,0:61:95.71:0,96,1501	1/1:14,13:27:37.65:378,38,0	0/0:48,0:49:99:0,104,1774	1/1:5,8:13:27.43:317,27,0	0/0:4,0:4:6.02:0,6,100
chr10	36405115	.	ATG	A	4657.50	PASS	AB=0.985;AC=25;AF=0.446;AN=56;BaseQRankSum=10.010;DP=835;FS=0.350;HRun=0;HaplotypeScore=272.2259;InbreedingCoeff=0.5839;MQ=50.03;MQ0=8;MQRankSum=-3.463;QD=11.42;ReadPosRankSum=2.986;VQSLOD=3.9018;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:15,0:15:4.04:4,0,29	1/1:6,0:6:15.04:171,15,0	0/0:40,0:20:6.56:0,7,296	0/0:42,0:23:26.86:0,27,289	0/0:15,0:15:27.09:0,27,438	0/1:11,0:12:28.93:29,0,63	0/0:12,0:12:4.21:0,4,85	1/1:53,0:51:6.25:203,6,0	0/0:46,2:48:32.06:0,32,1449	0/1:8,0:8:22.31:36,0,22	0/0:13,0:13:2.92:0,3,17	0/0:50,1:52:51.53:0,52,1475	1/1:47,0:48:86.46:965,86,0	1/1:46,0:47:26:774,26,0	0/1:26,0:26:17.35:17,0,199	0/0:37,2:39:17.39:0,17,1370	0/0:34,2:35:13.96:0,14,1155	0/1:5,0:5:13.76:14,0,24	1/1:21,0:19:35.70:335,36,0	1/1:24,0:24:35.86:398,36,0	1/1:68,1:68:48.63:750,49,0	1/1:29,0:30:29.92:323,30,0	0/0:17,0:17:14.97:0,15,202	0/0:55,0:54:68.65:0,69,1110	1/1:24,0:26:33.45:360,33,0	0/0:49,0:49:40.02:0,40,1527	1/1:17,0:17:26.25:279,26,0	0/0:7,0:7:17.97:0,18,278
chr10	36405165	.	CTG	C	1801.05	PASS	AB=0.988;AC=34;AF=0.630;AN=54;BaseQRankSum=14.702;DP=855;FS=8.278;HRun=0;HaplotypeScore=349.8470;InbreedingCoeff=0.6291;MQ=60.83;MQ0=2;MQRankSum=-13.961;QD=3.34;ReadPosRankSum=3.546;VQSLOD=0.3076;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:28:15.62:67,16,0	1/1:10,0:10:14.95:61,15,0	0/0:39,0:26:51.83:0,52,925	0/0:88,0:56:57.91:0,58,1338	0/0:9,0:9:24.08:0,24,412	1/1:23,0:23:33.08:135,33,0	1/1:31,0:31:12.94:55,13,0	1/1:36,0:32:41.15:235,41,0	0/0:40,0:40:90.29:0,90,1586	1/1:25,0:25:38.15:170,38,0	1/1:11,0:11:5.30:22,5,0	1/1:43,0:43:45.48:224,45,0	1/1:51,0:50:18.70:261,19,0	0/1:40,0:40:9.18:111,0,9	1/1:41,0:41:52.44:220,52,0	0/0:39,0:38:99:0,99,1762	0/0:42,0:41:99:0,114,2037	1/1:6,1:7:3.04:57,3,0	0/1:28,0:27:10.74:83,0,11	0/1:15,0:14:10.76:31,0,11	0/1:56,3:58:28.01:28,0,58	1/1:26,0:26:10.29:44,10,0	./.	1/1:23,0:23:7.67:33,8,0	1/1:19,0:19:15.21:60,15,0	0/0:40,0:40:93.88:0,94,1732	1/1:22,0:22:16.13:104,16,0	0/0:8,0:8:15.05:0,15,275
chr10	36405167	.	GTGTC	G	12967.96	PASS	AB=0.600;AC=38;AF=0.679;AN=56;BaseQRankSum=10.584;DP=841;FS=3.462;HRun=0;HaplotypeScore=323.4384;InbreedingCoeff=0.8808;MQ=61.47;MQ0=2;MQRankSum=-13.137;QD=24.15;ReadPosRankSum=-0.406;VQSLOD=3.8616;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,21:27:17.98:341,18,0	1/1:0,9:9:18.06:334,18,0	0/0:43,0:27:7.98:0,8,1239	0/0:88,0:56:73.96:0,74,1863	0/0:9,0:9:24.06:0,24,544	1/1:2,19:21:39.07:699,39,0	1/1:3,28:31:17.70:310,18,0	1/1:3,33:32:71.89:1435,72,0	0/0:39,0:39:90.31:0,90,2279	1/1:2,23:25:60.19:1059,60,0	1/1:3,8:11:5.92:113,6,0	1/1:9,34:43:83.61:1457,84,0	1/1:9,39:47:99:1914,117,0	1/1:9,31:40:48.82:835,49,0	1/1:1,40:41:59.93:1131,60,0	0/0:39,0:38:99:0,99,2433	0/0:42,0:41:99:0,114,2969	1/1:2,5:7:21:330,21,0	1/1:6,20:25:61.88:922,62,0	1/1:4,10:13:15.05:257,15,0	0/1:26,32:58:0.18:273,0,0	1/1:3,24:27:11.46:227,11,0	0/1:2,8:10:0:0,0,0	1/1:8,13:21:11.67:195,12,0	1/1:9,10:19:21.06:358,21,0	0/0:36,1:37:45.41:0,45,2352	1/1:2,20:22:47.95:778,48,0	0/0:6,0:6:15.05:0,15,405
chr10	36405192	.	A	AGTGTGT	7904.49	PASS	AB=0.964;AC=43;AF=0.768;AN=56;BaseQRankSum=6.149;DP=841;FS=3.543;HRun=0;HaplotypeScore=344.3421;InbreedingCoeff=0.2282;MQ=56.75;MQ0=9;MQRankSum=-4.568;QD=11.89;ReadPosRankSum=-0.048;VQSLOD=2.9780;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:27:4.70:64,5,0	1/1:8,3:11:14.55:268,15,0	0/0:55,0:32:7.30:0,7,340	0/0:97,0:52:35.87:0,36,992	0/1:7,0:7:17.30:17,0,126	1/1:15,0:20:12.70:191,13,0	1/1:25,0:35:8.70:138,9,0	1/1:41,0:43:68.95:1207,69,0	0/1:41,0:41:99:241,0,212	1/1:23,0:31:30.12:538,30,0	1/1:11,0:14:2.62:45,3,0	1/1:32,0:38:10.28:268,10,0	1/1:26,16:42:72.09:1732,72,0	1/1:17,16:33:32.19:970,32,0	1/1:29,0:48:16.39:231,16,0	0/1:32,0:31:99:100,0,337	0/1:40,0:40:99:164,0,403	1/1:8,0:10:17.62:174,18,0	1/1:19,1:19:27.03:489,27,0	1/1:8,0:7:3.01:59,3,0	1/1:46,5:54:7.58:78,8,0	0/0:18,6:24:0.89:0,1,2	0/1:6,2:9:0:0,0,0	1/1:19,1:28:14.37:150,14,0	1/1:10,2:12:5.60:51,6,0	0/1:27,0:27:77.36:77,0,390	1/1:11,9:23:26.92:649,27,0	0/1:7,0:7:2.40:2,0,257
chr10	36405201	.	G	GTGTC	7694.27	PASS	AB=1.000;AC=28;AF=0.519;AN=54;BaseQRankSum=-1.490;DP=829;FS=9.350;HRun=0;HaplotypeScore=300.0859;InbreedingCoeff=0.0368;MQ=56.34;MQ0=13;MQRankSum=-2.768;QD=14.12;ReadPosRankSum=10.379;VQSLOD=2.2136;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:29:44.55:45,0,60	1/1:11,0:11:7.59:49,8,0	0/0:47,0:24:21.85:0,22,203	0/0:92,0:49:46.60:0,47,498	1/1:5,5:10:9.03:219,9,0	0/1:20,0:20:6.46:136,0,6	0/1:34,0:34:57.14:155,0,57	0/1:41,0:41:22.89:23,0,118	1/1:7,29:39:29.13:1773,29,0	0/1:29,0:29:71.65:345,0,72	0/1:13,0:13:0.21:1,0,0	0/1:34,0:34:47.67:58,0,48	0/1:41,0:40:18.01:351,0,18	1/1:34,0:33:29.55:332,30,0	0/1:45,0:45:29.40:199,0,29	1/1:14,24:37:42.14:1024,42,0	1/1:12,28:42:69.14:1575,69,0	0/1:10,0:10:25.15:130,0,25	0/1:18,0:17:34.89:57,0,35	./.	0/0:61,0:60:20.40:0,20,156	0/0:23,0:23:5.57:0,6,48	0/0:9,0:9:2.79:0,3,25	0/0:30,0:30:4.66:0,5,49	0/0:16,0:16:2.41:0,2,22	1/1:9,17:27:8.01:935,8,0	0/1:22,0:22:34.65:191,0,35	1/1:7,0:7:6:96,6,0
chr10	36405203	.	GTC	G	1937.47	PASS	AB=0.959;AC=26;AF=0.464;AN=56;BaseQRankSum=-2.004;DP=830;FS=15.468;HRun=0;HaplotypeScore=295.2435;InbreedingCoeff=0.1684;MQ=56.42;MQ0=14;MQRankSum=-3.108;QD=3.87;ReadPosRankSum=-5.993;VQSLOD=0.7113;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:28:2.93:95,3,0	1/1:9,2:11:5.69:83,6,0	0/0:49,0:25:11.84:0,12,444	0/0:94,0:50:53.15:0,53,1109	0/0:10,0:10:26.07:0,26,264	0/0:19,0:19:7.35:0,7,104	0/1:33,0:33:8.12:17,0,8	0/1:29,13:42:65.29:546,0,65	0/0:39,0:39:90.02:0,90,1139	0/1:30,0:30:10.32:10,0,190	0/1:12,0:12:0.01:0,0,1	0/1:31,1:32:1.77:2,0,94	1/1:31,10:40:1.10:401,1,0	0/1:30,5:34:3.33:145,0,3	0/1:46,0:46:11.88:55,0,12	0/0:39,1:39:81.12:0,81,925	0/0:44,0:43:99:0,99,1188	0/1:11,0:11:32.96:45,0,33	1/1:13,2:14:5.36:193,5,0	1/1:2,3:4:3.01:41,3,0	1/1:52,6:57:15.90:141,16,0	1/1:17,6:23:4.99:36,5,0	0/1:9,0:9:0:0,0,0	0/1:31,0:31:17.43:98,0,17	0/1:14,1:15:5.42:87,0,5	0/0:26,0:26:75.22:0,75,1010	0/1:22,1:23:45.24:107,0,45	0/0:8,0:8:21.05:0,21,267
chr10	36405373	.	GTC	G	3769.05	PASS	AB=0.985;AC=30;AF=0.536;AN=56;BaseQRankSum=2.193;DP=853;FS=3.050;HRun=0;HaplotypeScore=215.9390;InbreedingCoeff=0.2824;MQ=53.21;MQ0=15;MQRankSum=4.369;QD=7.23;ReadPosRankSum=-1.655;VQSLOD=3.1460;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:42,0:42:32.48:303,32,0	1/1:5,0:5:0.52:1,1,0	0/0:59,0:22:27.91:0,28,344	0/0:96,0:44:52.71:0,53,594	0/0:26,1:26:51.86:0,52,412	0/1:14,0:14:6.69:92,0,7	1/1:34,0:34:19.59:264,20,0	0/1:15,0:15:1.04:169,0,1	0/0:27,0:27:41.06:0,41,422	0/1:29,0:29:1.64:278,0,2	1/1:12,0:12:14.49:121,14,0	0/1:27,2:29:83.05:126,0,83	0/1:32,0:32:28.31:178,0,28	1/1:17,0:16:2.57:45,3,0	1/1:33,0:31:2.34:159,2,0	0/0:45,0:43:91.01:0,91,868	0/0:36,0:36:72.49:0,72,871	0/1:21,0:21:21.96:123,0,22	0/1:9,0:9:42.99:99,0,43	0/1:12,0:12:9.17:18,0,9	1/1:62,0:63:54.33:659,54,0	1/1:30,0:29:14.21:221,14,0	0/1:24,2:25:77.01:146,0,77	0/1:53,1:54:99:329,0,296	1/1:24,0:23:20.91:168,21,0	0/0:30,0:28:28.57:0,29,677	1/1:20,0:20:24.94:269,25,0	0/0:11,0:11:17.99:0,18,195
chr10	36405375	.	C	CTGTG	3846.27	PASS	AB=0.907;AC=42;AF=0.778;AN=54;BaseQRankSum=-4.520;DP=856;FS=5.137;HRun=0;HaplotypeScore=243.3864;InbreedingCoeff=0.0235;MQ=51.99;MQ0=14;MQRankSum=-0.899;QD=5.72;ReadPosRankSum=-3.740;VQSLOD=1.5381;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:43,0:43:4.58:226,5,0	0/1:5,0:5:0:0,0,0	./.	0/0:94,0:41:2.80:0,3,13	1/1:22,6:27:3.01:71,3,0	1/1:14,0:14:5.97:63,6,0	0/1:33,0:33:17.23:60,0,17	1/1:15,0:15:14.97:93,15,0	0/1:11,16:31:29.45:220,0,29	1/1:26,0:26:20.19:151,20,0	0/1:13,0:13:0.04:0,0,0	0/1:32,0:32:50.64:51,0,82	1/1:27,0:27:6.79:169,7,0	1/1:18,0:17:9.85:73,10,0	1/1:33,0:31:6.01:68,6,0	0/1:22,22:46:7.56:628,0,8	1/1:30,7:37:53.44:931,53,0	1/1:22,0:22:22.55:164,23,0	1/1:9,0:9:0.25:69,0,0	1/1:13,0:13:11.10:68,11,0	1/1:63,0:63:3.56:100,4,0	0/0:30,0:29:0.41:0,0,1	0/1:26,0:25:8.64:9,0,102	0/1:53,0:53:57.09:57,0,366	1/1:23,0:22:2.98:24,3,0	1/1:28,1:27:25.17:323,25,0	1/1:20,0:20:10.23:87,10,0	1/1:3,7:12:6.02:142,6,0
chr10	36406255	.	G	GA	4858.47	PASS	AB=0.903;AC=15;AF=0.268;AN=56;BaseQRankSum=-12.834;DP=582;FS=13.055;HRun=8;HaplotypeScore=52.3102;InbreedingCoeff=0.9034;MQ=75.25;MQ0=0;MQRankSum=-0.077;QD=24.29;ReadPosRankSum=0.953;VQSLOD=4.5022;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,22:25:57.17:658,57,0	0/0:8,0:8:18.01:0,18,165	0/0:17,0:18:18.39:0,18,282	0/0:6,0:6:15.01:0,15,137	0/0:22,0:22:63.03:0,63,576	1/1:5,21:27:66.03:738,66,0	1/1:6,11:17:30.09:346,30,0	0/0:34,0:34:84.03:0,84,769	0/0:19,0:19:48.02:0,48,439	1/1:2,34:36:99:1157,102,0	1/1:2,23:25:63.19:727,63,0	0/0:15,0:15:42.02:0,42,384	0/0:19,0:19:57.01:0,57,513	0/0:20,0:20:54.02:0,54,494	1/1:3,22:25:54.16:623,54,0	0/0:23,0:23:66.03:0,66,604	0/0:13,0:13:27:0,27,247	1/1:1,16:17:51.14:577,51,0	0/0:13,0:13:30.01:0,30,274	0/0:38,0:38:99:0,102,933	0/0:17,0:17:48.02:0,48,439	0/0:17,0:17:45.02:0,45,412	0/0:26,0:26:75.04:0,75,686	0/0:15,0:15:39.02:0,39,357	0/0:18,0:18:48.02:0,48,439	0/1:25,3:28:31.83:32,0,505	0/0:26,0:26:75.02:0,75,681	0/0:15,0:15:41.97:0,42,376
chr10	36407625	.	G	GGA	5642.48	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-13.078;DP=606;FS=4.764;HRun=0;HaplotypeScore=74.8496;InbreedingCoeff=0.9936;MQ=76.12;MQ0=2;MQRankSum=-2.511;QD=33.00;ReadPosRankSum=3.191;VQSLOD=7.2418;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,42:44:58.78:1508,59,0	0/0:5,0:5:15.05:0,15,189	0/0:29,0:26:29.87:0,30,493	0/0:29,0:23:39.72:0,40,508	0/0:21,0:21:45.14:0,45,568	1/1:2,23:24:48.16:798,48,0	1/1:6,21:27:48.16:798,48,0	0/0:23,0:23:57.17:0,57,705	0/0:25,0:25:63.18:0,63,780	1/1:1,18:18:51.17:843,51,0	1/1:1,15:16:24.08:399,24,0	0/0:17,0:16:33.11:0,33,416	0/0:17,0:17:42.13:0,42,530	0/0:15,0:15:42.13:0,42,530	1/1:4,18:22:45.15:748,45,0	0/0:21,0:21:48.13:0,48,589	0/0:28,0:28:75.24:0,75,946	1/1:1,15:17:33.11:549,33,0	0/0:17,0:17:39.12:0,39,492	0/0:17,0:17:45.08:0,45,513	0/0:35,1:36:52.43:0,52,1182	0/0:22,0:22:54.17:0,54,680	0/0:17,0:17:51.15:0,51,629	0/0:31,0:31:90.27:0,90,1135	0/0:15,0:15:39.12:0,39,492	0/0:23,0:23:66.21:0,66,833	0/0:21,0:21:48.11:0,48,586	0/0:5,0:5:15.01:0,15,158
chr10	36407767	.	AG	A	12564.06	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=7.196;DP=559;FS=2.561;HRun=3;HaplotypeScore=65.1777;InbreedingCoeff=0.9966;MQ=81.86;MQ0=0;MQRankSum=-7.005;QD=31.81;ReadPosRankSum=2.829;VQSLOD=5.0480;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,21:25:51.16:632,51,0	1/1:0,8:8:24.08:297,24,0	0/0:33,0:32:90.30:0,90,1284	0/0:22,0:22:65.46:0,65,858	0/0:18,0:18:48.15:0,48,670	1/1:0,16:16:45.14:558,45,0	1/1:1,31:32:78.25:967,78,0	1/1:1,24:25:72.21:880,72,0	0/0:15,0:15:45.15:0,45,648	1/1:2,25:27:69.21:844,69,0	1/1:1,12:13:36.11:446,36,0	1/1:2,16:18:39.57:484,40,0	1/1:2,18:20:54.17:669,54,0	1/1:0,16:16:42.13:521,42,0	1/1:0,25:25:69.22:855,69,0	0/0:18,0:18:54.18:0,54,777	0/0:34,0:34:96.32:0,96,1379	1/1:0,25:25:72.23:893,72,0	1/1:1,18:19:54.15:655,54,0	1/1:0,17:17:42.13:521,42,0	1/1:2,19:21:48.15:595,48,0	1/1:1,14:15:33.10:406,33,0	1/1:1,10:11:24.08:297,24,0	1/1:1,19:20:48.15:595,48,0	1/1:0,17:17:42.13:521,42,0	0/0:19,0:19:57.18:0,57,804	1/1:0,25:25:75.24:929,75,0	0/0:5,0:5:15.05:0,15,213
chr10	36407826	.	C	CTGTG	2303.18	PASS	AB=0.946;AC=33;AF=0.688;AN=48;BaseQRankSum=-0.403;DP=583;FS=4.059;HRun=0;HaplotypeScore=143.5526;InbreedingCoeff=0.2984;MQ=52.11;MQ0=22;MQRankSum=-2.845;QD=5.39;ReadPosRankSum=-2.696;VQSLOD=2.1958;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:35,1:36:21.05:314,21,0	0/1:12,0:12:18.95:35,0,19	./.	./.	./.	1/1:18,0:18:12.51:229,13,0	1/1:23,1:24:3.01:70,3,0	1/1:27,0:26:2.29:6,2,0	0/0:14,0:14:8.81:0,9,120	1/1:21,0:19:10.81:53,11,0	./.	1/1:16,0:15:6.31:45,6,0	1/1:16,1:18:12.51:131,13,0	1/1:23,0:23:3.01:70,3,0	1/1:19,2:21:13.83:233,14,0	0/0:19,0:19:18.04:0,18,255	0/0:33,0:36:51:0,51,644	0/1:23,3:26:26.38:231,0,26	1/1:21,0:20:11.12:121,11,0	1/1:22,0:21:2.91:70,3,0	1/1:26,0:24:11.98:120,12,0	1/1:23,0:23:5.99:53,6,0	0/0:8,0:9:3:0,3,28	0/1:27,0:29:33.94:72,0,34	0/1:17,1:18:8.96:132,0,9	0/1:22,0:21:21.28:21,0,40	1/1:20,1:22:25.63:456,26,0	0/0:11,0:8:6.02:0,6,84
chr10	36407978	.	C	CA	17409.09	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-14.209;DP=609;FS=4.272;HRun=0;HaplotypeScore=59.4092;InbreedingCoeff=0.9939;MQ=97.17;MQ0=0;MQRankSum=-2.763;QD=42.57;ReadPosRankSum=3.714;VQSLOD=5.5042;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,40:40:99:1674,105,0	1/1:0,12:12:36.12:575,36,0	0/0:31,0:31:93.08:0,93,1164	0/0:30,0:30:84.24:0,84,1125	0/0:9,0:9:18.06:0,18,252	1/1:0,18:18:45.15:717,45,0	1/1:0,38:38:99:1677,105,0	1/1:0,23:23:66.12:980,66,0	0/0:21,0:21:60.19:0,60,816	1/1:0,20:20:57.19:911,57,0	1/1:1,8:9:21.07:335,21,0	1/1:1,22:23:63.21:1006,63,0	1/1:0,18:19:54.14:822,54,0	1/1:0,18:18:48.16:766,48,0	1/1:0,16:16:36.12:575,36,0	0/0:31,0:31:93.29:0,93,1266	0/0:41,0:41:99:0,120,1637	1/1:0,27:27:75.25:1182,75,0	1/1:1,13:14:42.11:644,42,0	1/1:0,8:8:18.06:287,18,0	1/1:2,28:30:78.27:1245,78,0	1/1:1,16:17:48.16:767,48,0	1/1:0,7:7:15.05:236,15,0	1/1:1,34:35:90.31:1437,90,0	1/1:0,18:18:48.16:761,48,0	0/0:20,0:20:60.19:0,60,824	1/1:0,17:17:51.17:813,51,0	0/0:17,0:17:51.17:0,51,712
chr10	36408580	.	T	TC	21716.73	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-11.294;DP=796;FS=1.262;HRun=2;HaplotypeScore=75.7977;InbreedingCoeff=0.9999;MQ=85.63;MQ0=0;MQRankSum=-5.090;QD=38.78;ReadPosRankSum=2.670;VQSLOD=5.5363;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,44:46:99:1747,123,0	1/1:1,12:13:30.10:432,30,0	0/0:32,0:32:84.26:0,84,1026	0/0:25,0:25:69.21:0,69,839	0/0:24,0:24:69.22:0,69,854	1/1:0,20:20:57.19:821,57,0	1/1:4,22:26:57.19:821,57,0	1/1:2,24:26:72.24:1035,72,0	0/0:29,0:29:87.26:0,87,1064	1/1:1,31:32:93.30:1320,93,0	1/1:0,21:21:57.19:817,57,0	1/1:2,26:28:75.25:1076,75,0	1/1:3,28:31:84.28:1208,84,0	1/1:3,25:28:78.25:1106,78,0	1/1:0,42:42:99:1685,117,0	0/0:39,0:39:99:0,114,1413	0/0:38,0:38:99:0,102,1265	1/1:1,33:34:93.31:1337,93,0	1/1:1,19:20:57.18:798,57,0	1/1:2,18:20:54.18:769,54,0	1/1:2,35:37:99:1407,99,0	1/1:0,36:36:99:1425,99,0	1/1:0,21:21:54.18:777,54,0	1/1:0,30:30:84.28:1209,84,0	1/1:1,22:24:69.23:977,69,0	0/0:27,0:27:81.25:0,81,1002	1/1:2,23:25:66.22:950,66,0	0/0:22,0:22:66.21:0,66,818
chr10	36409059	.	G	GTGGCAGACTC	28967.25	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-6.343;DP=689;FS=0.768;HRun=0;HaplotypeScore=149.2493;InbreedingCoeff=0.9510;MQ=58.44;MQ0=14;MQRankSum=-15.329;QD=57.70;ReadPosRankSum=2.978;VQSLOD=4.8484;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,20:24:47.67:2437,48,0	1/1:2,9:7:12.04:619,12,0	0/0:25,0:24:55.87:0,56,1793	0/0:21,0:20:57.19:0,57,1573	0/0:19,1:19:54.15:0,54,1563	1/1:7,14:16:36.12:1860,36,0	1/1:10,17:17:33.08:1553,33,0	1/1:22,3:12:29.99:680,30,0	0/0:22,0:22:66.19:0,66,1912	1/1:17,20:27:75.20:3216,75,0	1/1:6,6:9:6.02:287,6,0	1/1:12,20:20:45.15:2296,45,0	1/1:10,19:20:42.14:2138,42,0	1/1:11,21:21:48.12:2407,48,0	1/1:16,19:22:57.15:2595,57,0	0/0:30,0:30:87.27:0,87,2786	0/0:31,0:31:93.29:0,93,2961	1/1:9,7:14:30.06:1433,30,0	1/1:9,4:11:21.04:706,21,0	1/1:8,11:11:12:504,12,0	1/1:17,9:31:21.07:1049,21,0	1/1:4,7:5:6.02:322,6,0	1/1:1,14:14:18.06:967,18,0	1/1:10,11:18:21.07:955,21,0	1/1:10,15:22:36.12:1811,36,0	0/0:30,0:30:87.28:0,87,2671	1/1:6,7:8:24.08:1130,24,0	0/0:7,0:7:21.07:0,21,704
chr10	36409726	.	A	AT	1808.97	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-9.060;DP=735;FS=0.998;HRun=9;HaplotypeScore=82.5706;InbreedingCoeff=0.9557;MQ=69.96;MQ0=0;MQRankSum=-0.380;QD=23.80;ReadPosRankSum=-0.159;VQSLOD=4.1181;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:40:99:0,109,922	0/0:16,0:16:44.96:0,45,387	0/0:12,0:12:18.41:0,18,266	0/0:16,0:17:5.36:0,5,200	0/0:38,0:39:99:0,110,936	0/0:13,0:13:35.98:0,36,308	0/0:31,0:31:83.95:0,84,726	0/0:33,0:33:83.95:0,84,727	0/0:27,0:27:68.97:0,69,599	0/0:33,0:33:80.95:0,81,699	0/0:18,0:18:47.99:0,48,417	1/1:4,18:22:28.10:537,28,0	0/0:22,0:23:62.01:0,62,523	0/0:19,0:19:56.96:0,57,487	0/0:28,0:28:77.95:0,78,669	0/0:32,0:32:80.96:0,81,699	0/0:30,0:30:83.92:0,84,718	0/0:29,0:29:49.39:0,49,576	0/0:26,1:27:26.78:0,27,459	0/0:34,0:34:89.94:0,90,772	0/0:35,0:35:89.90:0,90,765	0/0:22,0:22:59.96:0,60,516	1/1:1,25:27:66.14:717,66,0	1/1:4,23:27:63.17:697,63,0	0/0:27,0:28:76.94:0,77,643	0/0:30,0:29:80.97:0,81,703	0/0:31,0:31:86.92:0,87,740	0/0:12,0:12:26.97:0,27,234
chr10	36410236	.	CTG	C	243.80	PASS	AB=0.889;AC=13;AF=0.241;AN=54;BaseQRankSum=-4.221;DP=535;FS=5.136;HRun=0;HaplotypeScore=158.1212;InbreedingCoeff=0.5311;MQ=67.06;MQ0=4;MQRankSum=2.659;QD=2.80;ReadPosRankSum=1.366;VQSLOD=2.6143;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:2.96:0,3,21	0/0:7,0:7:2.95:0,3,19	0/0:36,0:26:41.54:0,42,428	0/0:31,0:20:26.91:0,27,345	1/1:11,0:10:8.99:75,9,0	0/0:24,0:24:5.93:0,6,42	0/0:31,0:31:7.47:0,7,50	0/0:26,0:25:47.23:0,47,309	1/1:13,0:13:2.40:25,2,0	0/0:22,0:22:46.93:0,47,301	0/0:16,0:16:2.96:0,3,25	0/0:19,0:19:29.23:0,29,222	0/0:24,0:24:2.55:0,3,10	0/0:21,0:21:0.46:0,0,1	0/0:25,0:25:1.24:0,1,4	0/1:14,2:16:2.65:95,0,3	1/1:9,0:9:6:52,6,0	0/0:12,0:12:17.75:0,18,116	0/0:13,0:12:23.12:0,23,152	0/0:15,0:15:3.33:0,3,29	0/0:20,0:18:2.97:0,3,20	./.	0/0:20,0:20:19.96:0,20,133	0/0:22,0:22:11.70:0,12,81	1/1:16,0:15:0.47:1,0,0	1/1:15,0:15:11.97:99,12,0	0/0:26,0:26:16.02:0,16,100	1/1:5,2:7:3.01:38,3,0
chr10	36410249	.	TGGGGGGGGG	T	590.50	PASS	AB=0.891;AC=20;AF=0.370;AN=54;BaseQRankSum=0.750;DP=525;FS=30.132;HRun=12;HaplotypeScore=172.9372;InbreedingCoeff=0.1813;MQ=54.66;MQ0=17;MQRankSum=-6.048;QD=1.93;ReadPosRankSum=1.286;VQSLOD=-0.1691;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:13,0:14:9.44:33,0,9	0/0:6,0:6:0:0,0,0	0/0:28,0:19:49.13:0,49,1723	0/0:26,0:15:37.01:0,37,1316	0/0:12,0:10:21.94:0,22,719	0/1:18,0:19:10.35:50,0,10	0/1:27,1:30:0.75:18,0,1	0/1:15,0:17:60.87:131,0,61	0/0:16,0:16:32.15:0,32,1113	0/1:16,0:17:47.31:47,0,135	0/1:12,2:14:0.41:0,0,1	0/0:23,0:21:29.07:0,29,391	1/1:21,0:21:4.68:25,5,0	1/1:19,3:22:5.58:39,6,0	1/1:21,1:21:3:67,3,0	0/0:18,0:19:45.15:0,45,1663	0/0:16,0:15:39.13:0,39,1537	0/1:11,0:11:56.06:57,0,56	0/1:10,0:12:12.66:30,0,13	0/1:15,1:15:19.17:46,0,19	0/1:12,0:16:0:0,0,0	./.	0/0:20,0:22:20.41:0,20,223	1/1:23,2:25:3.53:22,4,0	0/1:16,0:13:0.02:0,0,0	0/0:17,0:17:26.29:0,26,652	0/1:23,2:26:3.63:174,0,4	0/0:13,0:13:33.11:0,33,1302
chr10	36412166	.	GAA	G	6486.56	PASS	AB=1.000;AC=41;AF=0.732;AN=56;BaseQRankSum=1.871;DP=541;FS=13.280;HRun=14;HaplotypeScore=91.6836;InbreedingCoeff=0.8901;MQ=69.48;MQ0=0;MQRankSum=-1.007;QD=15.33;ReadPosRankSum=7.124;VQSLOD=2.1215;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,30:35:52.89:653,53,0	1/1:2,6:8:17.70:151,18,0	0/1:21,0:16:2.52:3,0,172	0/0:10,0:9:4.34:0,4,95	0/0:7,0:24:54.90:0,55,555	1/1:2,8:15:23.07:221,23,0	1/1:3,24:34:70.76:643,71,0	1/1:9,12:25:34:305,34,0	0/0:1,0:17:21:0,21,189	1/1:7,16:25:16.76:321,17,0	1/1:4,11:16:29.97:277,30,0	1/1:5,17:25:26.44:328,26,0	1/1:1,17:19:42.20:365,42,0	1/1:2,7:10:11.95:111,12,0	1/1:7,11:20:17.05:303,17,0	0/0:4,0:10:20.54:0,21,160	0/0:10,0:24:36.02:0,36,402	1/1:2,23:26:59.92:602,60,0	1/1:6,14:23:41.24:403,41,0	1/1:2,11:13:23.94:222,24,0	1/1:2,11:14:25.74:248,26,0	1/1:4,5:10:14.95:139,15,0	1/1:6,10:17:14.76:185,15,0	1/1:7,20:30:59.19:507,59,0	1/1:5,14:22:30.91:297,31,0	0/0:10,0:25:54.08:0,54,585	1/1:2,10:13:21.45:203,21,0	0/0:6,0:7:10.23:0,10,77
chr10	36412824	.	CAT	C	15424.95	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=11.265;DP=555;FS=0.709;HRun=0;HaplotypeScore=77.5016;InbreedingCoeff=0.9977;MQ=86.52;MQ0=1;MQRankSum=-3.728;QD=40.27;ReadPosRankSum=2.909;VQSLOD=6.7435;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,13:13:33.11:504,33,0	1/1:0,7:7:21.07:321,21,0	0/0:24,0:24:72.17:0,72,1180	0/0:14,0:14:38.07:0,38,597	0/0:29,0:29:87.28:0,87,1645	1/1:0,29:29:84.29:1285,84,0	1/1:0,15:15:39.13:597,39,0	1/1:0,28:28:84.22:1182,84,0	0/0:20,0:20:60.16:0,60,1037	1/1:2,14:16:42.12:601,42,0	1/1:0,21:21:54.10:796,54,0	1/1:0,25:25:66.22:1010,66,0	1/1:0,13:13:39.13:597,39,0	1/1:1,7:8:18.06:275,18,0	1/1:0,14:14:36.12:551,36,0	0/0:22,0:22:63.18:0,63,1108	0/0:27,0:27:78.27:0,78,1480	1/1:0,19:19:48.16:734,48,0	1/1:0,12:12:36.12:551,36,0	1/1:0,33:32:92.12:1372,92,0	1/1:0,21:21:51.17:780,51,0	1/1:0,20:20:54.18:826,54,0	1/1:2,18:20:51.17:780,51,0	1/1:0,16:16:36.12:551,36,0	1/1:0,19:19:48.16:735,48,0	0/0:25,0:25:75.22:0,75,1371	1/1:0,34:34:90.31:1377,90,0	0/0:11,0:11:30.10:0,30,579
chr10	36413343	.	A	AC	6688.12	PASS	AB=0.986;AC=16;AF=0.286;AN=56;BaseQRankSum=-13.757;DP=742;FS=3.166;HRun=0;HaplotypeScore=105.1076;InbreedingCoeff=0.7959;MQ=71.91;MQ0=9;MQRankSum=0.832;QD=23.72;ReadPosRankSum=0.069;VQSLOD=5.8629;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,29:31:74.31:1221,74,0	0/0:10,0:10:27.05:0,27,114	0/1:65,1:33:37.33:37,0,614	0/0:56,0:28:3.60:0,4,314	0/0:28,0:28:67.07:0,67,1074	1/1:0,28:28:63.21:919,63,0	1/1:0,17:17:45.15:659,45,0	0/1:38,0:38:20.65:21,0,196	0/0:28,0:28:84.23:0,84,1096	1/1:4,21:25:64.63:916,65,0	1/1:0,33:33:93.03:1256,93,0	0/0:23,0:23:44.85:0,45,242	0/0:25,0:25:68.47:0,68,314	0/0:18,0:18:47.28:0,47,216	1/1:0,21:21:60.20:878,60,0	0/0:19,0:19:57.18:0,57,783	0/0:25,0:25:42.86:0,43,855	1/1:2,20:22:54.18:781,54,0	0/0:14,0:14:11.50:0,12,115	0/0:22,0:22:61.16:0,61,319	0/0:23,0:23:35.03:0,35,217	0/0:19,0:19:52.78:0,53,267	0/0:23,0:22:42.72:0,43,278	0/0:23,0:23:33.64:0,34,212	0/0:27,0:27:46.32:0,46,262	0/0:29,1:29:43.32:0,43,1043	0/0:30,0:30:59.30:0,59,326	0/0:16,0:16:48.16:0,48,671
chr10	36413769	.	C	CATTT	21145.69	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-9.207;DP=535;FS=6.217;HRun=0;HaplotypeScore=84.3350;InbreedingCoeff=0.9942;MQ=71.79;MQ0=0;MQRankSum=-6.182;QD=52.21;ReadPosRankSum=0.871;VQSLOD=5.6095;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,28:34:72.24:1775,72,0	1/1:2,8:10:24.08:527,24,0	0/0:15,0:15:41.70:0,42,618	0/0:13,0:13:29.64:0,30,442	0/0:23,0:23:66.11:0,66,1045	1/1:2,18:21:45.15:1078,45,0	1/1:3,10:14:30.10:718,30,0	1/1:9,18:29:69.11:1365,69,0	0/0:18,0:18:51.06:0,51,919	1/1:6,17:23:66.17:1465,66,0	1/1:4,14:19:42.10:927,42,0	1/1:15,0:15:21.07:395,21,0	1/1:2,22:25:63.22:1550,63,0	1/1:2,14:17:39.13:981,39,0	1/1:1,21:24:42.14:1020,42,0	0/0:13,0:13:39.11:0,39,660	0/0:18,0:18:45.11:0,45,716	1/1:2,12:15:36.12:868,36,0	1/1:1,23:24:69.21:1466,69,0	1/1:3,20:23:54.18:1237,54,0	1/1:3,7:10:24.08:604,24,0	1/1:4,17:21:50.87:1078,51,0	1/1:22,0:22:54.18:974,54,0	1/1:16,1:17:30.10:545,30,0	1/1:2,10:13:33.11:811,33,0	0/0:25,0:25:17.90:0,18,1032	1/1:6,22:29:75.25:1763,75,0	0/0:5,0:5:15.05:0,15,261
chr10	36413770	.	A	ATTTAT	16294.74	PASS	AB=0.926;AC=41;AF=0.732;AN=56;BaseQRankSum=5.773;DP=541;FS=6.798;HRun=0;HaplotypeScore=118.3311;InbreedingCoeff=0.9049;MQ=71.35;MQ0=0;MQRankSum=-8.499;QD=37.46;ReadPosRankSum=1.972;VQSLOD=4.2559;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:35,0:35:72.14:1184,72,0	1/1:9,0:9:23.97:355,24,0	0/0:14,0:15:41.17:0,41,718	0/0:13,0:13:32.90:0,33,463	0/0:23,0:24:65.86:0,66,1169	1/1:20,1:21:45.05:765,45,0	1/1:15,0:15:14.46:462,14,0	1/1:29,0:29:46.16:924,46,0	0/0:18,0:18:30.02:0,30,1042	1/1:22,0:22:42.74:924,43,0	1/1:17,0:17:41.88:608,42,0	1/1:1,10:15:21.07:602,21,0	1/1:24,0:24:63.13:1033,63,0	1/1:17,0:17:39.13:661,39,0	1/1:23,0:23:42.04:675,42,0	0/0:13,0:13:39.12:0,39,761	0/0:18,0:18:45.10:0,45,803	1/1:15,0:15:36.12:598,36,0	1/1:25,0:25:49.58:1066,50,0	1/1:22,0:23:57.19:916,57,0	1/1:10,0:10:24.08:407,24,0	1/1:20,0:20:32.02:712,32,0	1/1:3,20:26:60.68:1666,61,0	1/1:4,15:20:30.01:863,30,0	1/1:13,1:14:36.12:627,36,0	0/1:23,1:25:14.06:14,0,1139	1/1:30,0:30:75.25:1234,75,0	0/0:4,0:5:15.05:0,15,300
chr10	36414218	.	A	AC	23518.34	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-15.386;DP=762;FS=14.313;HRun=0;HaplotypeScore=66.4566;InbreedingCoeff=0.9997;MQ=79.55;MQ0=0;MQRankSum=-3.416;QD=42.76;ReadPosRankSum=3.313;VQSLOD=4.1240;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,33:34:90.31:1434,90,0	1/1:0,11:11:33.11:527,33,0	0/0:22,0:22:60.02:0,60,777	0/0:24,0:24:35.56:0,36,766	0/0:33,0:33:99:0,99,1369	1/1:1,28:29:72.25:1150,72,0	1/1:0,17:17:45.15:719,45,0	1/1:1,32:33:96.28:1453,96,0	0/0:22,0:22:66.22:0,66,922	1/1:0,36:36:99:1662,108,0	1/1:1,29:30:87.29:1359,87,0	1/1:1,11:12:27.09:431,27,0	1/1:0,23:23:57.11:910,57,0	1/1:0,33:33:81.28:1293,81,0	1/1:1,26:27:75.26:1198,75,0	0/0:24,0:24:72.23:0,72,988	0/0:32,0:32:96.29:0,96,1304	1/1:1,20:21:60.20:957,60,0	1/1:1,27:28:81.19:1213,81,0	1/1:0,45:45:99:2024,129,0	1/1:0,29:29:75.26:1198,75,0	1/1:0,33:33:93.25:1440,93,0	1/1:0,37:37:96.23:1532,96,0	1/1:0,20:20:54.02:862,54,0	1/1:1,10:11:30.10:479,30,0	0/0:28,1:29:39.29:0,39,1080	1/1:0,41:41:99:1676,105,0	0/0:26,0:26:78.23:0,78,1036
chr10	36414678	.	C	CAGCTT	18359.18	PASS	AB=0.920;AC=41;AF=0.732;AN=56;BaseQRankSum=3.350;DP=497;FS=153.684;HRun=0;HaplotypeScore=91.1493;InbreedingCoeff=0.8873;MQ=85.03;MQ0=0;MQRankSum=-14.684;QD=54.32;ReadPosRankSum=-0.137;VQSLOD=1.4390;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,20:21:29.97:713,30,0	1/1:0,7:10:21.01:662,21,0	0/0:26,0:26:68.84:0,69,1273	0/0:35,0:34:89.41:0,89,1848	0/0:28,0:28:78.27:0,78,1690	1/1:3,14:21:36.12:1073,36,0	1/1:2,9:15:15.05:474,15,0	1/1:8,11:21:51.15:1180,51,0	0/0:18,0:18:48.15:0,48,1001	1/1:3,17:22:60.18:1619,60,0	1/1:1,12:14:27.09:851,27,0	1/1:2,8:11:24.08:647,24,0	1/1:1,13:16:27.09:796,27,0	1/1:0,7:7:18.06:567,18,0	1/1:0,18:19:33.11:1042,33,0	0/0:19,0:19:54.19:0,54,1150	0/0:25,0:25:60.21:0,60,1295	1/1:1,5:8:9.03:281,9,0	1/1:2,9:14:39.11:914,39,0	1/1:1,23:26:66.16:1998,66,0	1/1:2,5:8:12.04:321,12,0	1/1:2,14:17:45.15:1362,45,0	1/1:3,13:17:33.11:1041,33,0	1/1:2,9:11:18.95:467,19,0	1/1:1,15:18:42.14:1268,42,0	0/1:21,2:23:99:123,0,1199	1/1:4,14:18:33.11:958,33,0	0/0:8,0:8:24.08:0,24,521
chr10	36415036	.	T	TAA	826.01	PASS	AC=18;AF=0.750;AN=24;BaseQRankSum=-0.087;DP=240;FS=0.000;HRun=8;HaplotypeScore=40.4426;InbreedingCoeff=0.6436;MQ=17.14;MQ0=172;MQRankSum=-0.851;QD=10.33;ReadPosRankSum=-0.851;VQSLOD=-0.6818;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	1/1:2,6:4:9.03:143,9,0	./.	./.	0/0:18,0:15:17.80:0,18,200	./.	./.	./.	./.	1/1:1,8:3:6.02:95,6,0	1/1:4,7:10:12.04:190,12,0	./.	./.	./.	./.	./.	./.	./.	./.	1/1:1,8:5:9.03:143,9,0	./.	1/1:0,7:7:6.02:95,6,0	1/1:5,0:6:7.49:26,7,0	1/1:0,0:1:2.50:9,2,0	1/1:0,12:5:12.04:190,12,0	0/0:17,0:5:11.99:0,12,134	1/1:1,6:1:3.01:47,3,0	0/0:8,0:5:6.02:0,6,67
chr10	36415448	.	T	TCAGCCTC	21522.89	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=8.553;DP=465;FS=19.390;HRun=0;HaplotypeScore=124.6341;InbreedingCoeff=0.9373;MQ=58.29;MQ0=5;MQRankSum=-15.149;QD=72.47;ReadPosRankSum=-1.377;VQSLOD=3.1292;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,14:23:57.19:2061,57,0	1/1:1,3:4:12.04:477,12,0	0/0:13,0:11:24.08:0,24,572	0/0:28,0:26:63.21:0,63,1435	0/0:17,0:17:48.16:0,48,1236	1/1:4,19:22:60.20:2172,60,0	1/1:7,12:21:33.11:1315,33,0	1/1:14,10:19:48.16:1719,48,0	0/0:19,0:19:51.16:0,51,1270	1/1:8,6:15:36.12:1177,36,0	1/1:4,1:6:6.02:238,6,0	1/1:5,9:15:36.12:1295,36,0	1/1:3,10:12:33.03:1315,33,0	1/1:6,10:16:42.14:1424,42,0	1/1:10,8:19:36.12:1309,36,0	0/0:21,0:21:51.17:0,51,1221	0/0:35,0:35:93.32:0,93,2403	1/1:7,9:18:33.11:1152,33,0	1/1:3,7:11:27.09:967,27,0	1/1:6,2:6:3.01:117,3,0	1/1:8,6:16:23.82:934,24,0	1/1:7,8:17:33.11:1174,33,0	1/1:5,5:12:21.07:822,21,0	1/1:2,5:8:9.03:358,9,0	1/1:4,7:11:24.08:885,24,0	0/0:21,0:21:63.15:0,63,1524	1/1:3,2:7:21.07:612,21,0	0/0:14,0:14:42.14:0,42,1091
chr10	36415600	.	T	TCC	5408.43	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=5.329;DP=558;FS=2.236;HRun=0;HaplotypeScore=105.5073;InbreedingCoeff=0.9030;MQ=63.49;MQ0=20;MQRankSum=-5.115;QD=13.80;ReadPosRankSum=-0.210;VQSLOD=4.8484;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:42,0:39:89.22:718,89,0	1/1:3,0:3:3:25,3,0	0/0:25,0:17:21.07:0,21,304	0/0:33,0:20:59.55:0,60,565	0/0:10,0:11:14.99:0,15,153	1/1:16,0:16:32.90:286,33,0	1/1:9,30:41:12.62:114,13,0	1/1:14,0:12:10.88:216,11,0	0/0:23,0:21:52.91:0,53,436	1/1:19,0:18:50.79:477,51,0	1/1:12,0:11:21.33:192,21,0	1/1:14,0:13:38.93:322,39,0	1/1:5,17:22:5.89:72,6,0	1/1:17,0:17:30.88:281,31,0	1/1:20,0:20:50.56:401,51,0	0/0:14,0:18:17.34:0,17,272	0/0:25,0:28:38.28:0,38,435	1/1:16,1:18:36:377,36,0	1/1:14,1:15:34.59:317,35,0	1/1:14,0:13:23.69:171,24,0	1/1:9,34:42:3.01:58,3,0	1/1:18,0:18:44.88:362,45,0	1/1:11,0:11:26.61:201,27,0	1/1:22,0:23:42.84:351,43,0	1/1:16,0:16:23.96:272,24,0	0/0:14,0:16:32.03:0,32,364	1/1:10,0:10:19.68:195,20,0	0/0:10,0:10:12.07:0,12,124
chr10	36416166	.	A	ATGAAGAGAGCTTCC	49025.52	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=2.607;DP=550;FS=17.121;HRun=0;HaplotypeScore=218.0917;InbreedingCoeff=0.9933;MQ=69.14;MQ0=0;MQRankSum=-17.952;QD=135.43;ReadPosRankSum=-2.609;VQSLOD=3.3413;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,7:18:48.08:2360,48,0	1/1:10,9:19:54.15:3122,54,0	0/0:31,0:31:78.25:0,78,2914	0/0:27,0:27:69.23:0,69,2561	0/0:24,0:24:69.22:0,69,2716	1/1:16,8:24:60.21:3309,60,0	1/1:15,6:21:51.17:2467,51,0	1/1:15,0:12:30.09:1503,30,0	0/0:29,0:29:81.28:0,81,3197	1/1:17,6:23:59.93:3324,60,0	1/1:10,6:16:48.16:2647,48,0	1/1:13,6:19:36.12:2341,36,0	1/1:12,12:24:57.16:3125,57,0	1/1:12,8:20:48.16:2618,48,0	1/1:12,10:22:60.13:3264,60,0	0/0:21,0:21:63.22:0,63,2635	0/0:28,0:28:81.28:0,81,3325	1/1:8,6:14:36.12:2282,36,0	1/1:9,1:6:18.06:1049,18,0	1/1:10,7:20:54.14:3044,54,0	1/1:6,0:6:12.04:601,12,0	1/1:13,1:15:36.08:1703,36,0	1/1:15,3:19:51.17:2657,51,0	1/1:7,10:17:39.06:1979,39,0	1/1:11,4:17:39.13:2106,39,0	0/0:15,0:15:42.14:0,42,1610	1/1:8,12:20:57.20:3524,57,0	0/0:13,0:13:39.13:0,39,1582
chr10	36416971	.	GAC	G	1782.95	PASS	AB=0.859;AC=37;AF=0.771;AN=48;BaseQRankSum=4.491;DP=610;FS=1.921;HRun=0;HaplotypeScore=104.5537;InbreedingCoeff=0.4814;MQ=59.81;MQ0=24;MQRankSum=-1.908;QD=4.02;ReadPosRankSum=2.560;VQSLOD=2.6247;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:25,16:41:9.71:195,0,10	0/0:6,0:8:5.84:0,6,70	./.	./.	./.	1/1:9,1:10:3.01:32,3,0	1/1:16,8:24:9.02:98,9,0	0/0:24,0:24:9.81:0,10,79	1/1:11,0:22:22.73:111,23,0	1/1:19,9:26:18.04:193,18,0	1/1:4,3:7:6.01:65,6,0	1/1:14,0:24:22.31:111,22,0	0/1:14,0:20:2.44:2,0,70	0/0:16,0:20:18.01:0,18,208	1/1:18,1:21:8.59:78,9,0	1/1:16,0:29:24.95:119,25,0	1/1:19,0:28:11.36:56,11,0	1/1:12,9:23:23.73:222,24,0	1/1:13,0:11:2.84:14,3,0	1/1:11,3:14:6.02:65,6,0	1/1:30,12:42:5.79:231,6,0	0/0:13,0:14:9.01:0,9,96	1/1:7,0:12:8.52:42,9,0	1/1:23,0:33:19.88:98,20,0	0/1:16,2:19:43.81:44,0,123	1/1:7,0:14:13.80:62,14,0	1/1:8,4:11:9.02:97,9,0	./.
chr10	36417120	.	T	TGCAATACAGTGGA	12023.39	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-2.180;DP=545;FS=37.507;HRun=0;HaplotypeScore=188.7346;InbreedingCoeff=0.9750;MQ=76.07;MQ0=0;MQRankSum=-12.202;QD=152.19;ReadPosRankSum=0.244;VQSLOD=3.5058;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,6:6:18.06:1175,18,0	0/0:3,0:3:9.03:0,9,325	0/0:29,0:29:73.75:0,74,2147	0/0:21,0:21:54.18:0,54,1974	0/0:6,0:6:18.05:0,18,603	1/1:3,6:9:26.96:1395,27,0	1/1:8,3:12:33.11:1761,33,0	0/0:19,0:19:54.17:0,54,1893	0/0:28,0:28:84.27:0,84,3343	1/1:12,9:23:57.16:3116,57,0	1/1:1,4:6:14.64:946,15,0	0/0:41,0:41:99:0,123,4781	0/0:28,0:28:81.26:0,81,3100	0/0:31,0:31:90.28:0,90,3450	1/1:4,9:16:39.10:2318,39,0	0/0:28,0:28:84.27:0,84,3310	0/0:47,0:47:99:0,138,5380	1/1:3,4:7:21.07:1313,21,0	0/0:24,0:24:63.17:0,63,2099	0/0:5,0:5:15.05:0,15,629	0/0:54,0:54:99:0,157,6072	0/0:12,0:12:33.09:0,33,1180	0/0:7,0:7:18.05:0,18,649	0/0:36,0:36:99:0,105,3965	0/0:9,0:9:27.09:0,27,1093	0/0:20,0:20:60.19:0,60,2257	0/0:12,0:10:33.11:0,33,1235	0/0:6,0:6:15.02:0,15,363
chr10	36417237	.	GCAGAAGAACC	G	6196.73	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=12.067;DP=566;FS=48.342;HRun=0;HaplotypeScore=175.9807;InbreedingCoeff=0.9834;MQ=72.93;MQ0=0;MQRankSum=-12.632;QD=70.42;ReadPosRankSum=0.936;VQSLOD=2.6893;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,11:14:30.10:986,30,0	0/0:9,0:9:27.09:0,27,1400	0/0:11,0:11:23.66:0,24,997	0/0:17,0:17:48.15:0,48,1642	0/0:11,0:11:33.11:0,33,1758	1/1:1,7:8:20.06:575,20,0	1/1:1,15:16:41.79:1398,42,0	0/0:20,0:20:54.19:0,54,2711	0/0:32,0:32:93.32:0,93,4812	1/1:2,16:17:42.14:1401,42,0	1/1:2,9:11:11.85:350,12,0	0/0:45,0:45:99:0,126,6504	0/0:27,0:27:78.27:0,78,4160	0/0:26,0:26:75.26:0,75,3813	1/1:4,11:15:28.08:986,28,0	0/0:12,0:12:36.12:0,36,1922	0/0:36,0:36:99:0,108,5221	1/1:0,6:6:15.05:500,15,0	0/0:18,0:18:48.16:0,48,2366	0/0:13,0:13:36.12:0,36,1840	0/0:66,0:66:99:0,196,9876	0/0:16,0:16:45.15:0,45,2321	0/0:8,0:8:24.08:0,24,1259	0/0:35,0:35:99:0,105,5347	0/0:16,0:16:45.13:0,45,2135	0/0:24,0:24:66.22:0,66,3284	0/0:30,0:30:90.31:0,90,4729	0/0:6,0:6:12.04:0,12,641
chr10	36417316	.	T	TACC	8437.36	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=13.841;DP=626;FS=14.198;HRun=0;HaplotypeScore=112.8859;InbreedingCoeff=0.9983;MQ=80.82;MQ0=0;MQRankSum=-12.940;QD=66.44;ReadPosRankSum=1.651;VQSLOD=5.3899;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,30:32:90.31:2213,90,0	0/0:11,0:11:33.11:0,33,607	0/0:21,0:21:63.15:0,63,997	0/0:23,0:23:64.44:0,64,1079	0/0:21,0:21:57.18:0,57,1020	1/1:0,12:12:36.12:849,36,0	1/1:1,20:22:60.21:1456,60,0	0/0:21,0:21:57.18:0,57,987	0/0:20,0:20:60.19:0,60,1088	1/1:4,14:19:51.18:1248,51,0	1/1:1,8:9:21.07:516,21,0	0/0:31,0:31:93.31:0,93,1687	0/0:32,0:32:96.32:0,96,1737	0/0:31,0:31:87.30:0,87,1613	1/1:1,10:11:33.07:758,33,0	0/0:22,0:22:66.21:0,66,1200	0/0:38,0:38:99:0,111,2045	1/1:4,18:22:57.20:1398,57,0	0/0:29,0:29:84.26:0,84,1474	0/0:12,0:12:36.12:0,36,671	0/0:51,0:51:99:0,147,2637	0/0:12,0:12:36.11:0,36,640	0/0:7,0:7:21.07:0,21,387	0/0:35,0:34:99:0,105,1920	0/0:18,0:18:51.15:0,51,918	0/0:20,0:20:51.17:0,51,950	0/0:31,0:31:90.26:0,90,1618	0/0:13,0:13:39.12:0,39,696
chr10	36417693	.	AGTGTGTGTGAGTGTGTGAGT	A	2031	PASS	AC=8;AF=0.160;AN=50;BaseQRankSum=-4.789;DP=901;FS=34.332;HRun=0;HaplotypeScore=508.7653;InbreedingCoeff=0.9764;MQ=53.36;MQ0=1;MQRankSum=-3.391;QD=20.94;ReadPosRankSum=-0.873;VQSLOD=-0.5244;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:26,1:27:9:99,9,0	0/0:17,0:17:39.10:0,39,1365	0/0:31,0:20:33.09:0,33,624	0/0:26,0:20:41.99:0,42,714	0/0:31,0:31:33.11:0,33,989	./.	1/1:20,0:20:19.87:391,20,0	0/0:34,0:34:63.21:0,63,1911	0/0:43,0:43:69.20:0,69,1985	1/1:32,3:34:45.15:1346,45,0	./.	0/0:43,0:43:77.15:0,77,2929	0/0:43,0:43:99:0,105,3965	0/0:58,0:58:99:0,120,5116	./.	0/0:45,0:45:77.56:0,78,2329	0/0:18,0:18:48.10:0,48,971	1/1:13,2:15:14.94:345,15,0	0/0:20,0:18:33.11:0,33,1311	0/0:30,0:30:62.97:0,63,1877	0/0:94,0:94:99:0,189,6405	0/0:33,0:33:73.86:0,74,1781	0/0:32,0:32:66.17:0,66,2393	0/0:43,0:43:80.61:0,81,2426	0/0:26,0:26:38.70:0,39,949	0/0:43,0:43:99:0,99,2466	0/0:27,0:28:66.18:0,66,2174	0/0:15,0:14:30.10:0,30,860
chr10	36417707	.	TGTGA	T	1012.05	PASS	AB=0.933;AC=7;AF=0.140;AN=50;BaseQRankSum=-0.248;DP=872;FS=18.734;HRun=0;HaplotypeScore=302.9432;InbreedingCoeff=0.8051;MQ=49.72;MQ0=13;MQRankSum=-4.200;QD=12.19;ReadPosRankSum=-2.444;VQSLOD=1.6500;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:18,7:25:8.99:74,9,0	0/0:19,0:19:45.36:0,45,759	0/0:23,0:13:17.91:0,18,371	0/0:27,0:21:26.80:0,27,540	0/0:25,0:25:32.53:0,33,235	./.	1/1:14,4:18:17.91:237,18,0	0/0:39,0:36:99:0,99,1610	0/0:40,0:40:70.90:0,71,462	1/1:18,8:25:19.58:682,20,0	./.	0/0:41,0:41:92.67:0,93,1439	0/0:46,0:46:99:0,126,1946	0/0:58,0:58:99:0,129,2223	./.	0/0:46,0:46:81.21:0,81,568	0/0:24,0:24:53.71:0,54,362	0/1:13,1:13:26.78:158,0,27	0/0:21,0:12:35.47:0,35,599	0/0:30,0:30:68.89:0,69,1012	0/0:101,1:97:99:0,176,2790	0/0:35,0:35:80.53:0,81,940	0/0:31,0:31:72.39:0,72,1138	0/0:46,0:46:80.69:0,81,1196	0/0:20,0:20:38.72:0,39,485	0/0:41,0:41:96.29:0,96,710	0/0:27,0:27:75.21:0,75,1235	0/0:13,0:12:29.60:0,30,193
chr10	36417711	.	AGT	A	4401.53	PASS	AB=1.000;AC=17;AF=0.340;AN=50;BaseQRankSum=7.153;DP=852;FS=3.901;HRun=0;HaplotypeScore=268.2987;InbreedingCoeff=0.7711;MQ=48.44;MQ0=14;MQRankSum=0.749;QD=16.93;ReadPosRankSum=3.344;VQSLOD=4.5907;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:23:0:0,0,0	0/0:19,0:19:44.86:0,45,517	0/0:23,0:13:18.04:0,18,237	0/0:27,0:20:25.65:0,26,339	1/1:2,22:24:30.10:390,30,0	./.	0/1:17,0:17:4.44:12,0,4	0/0:41,0:37:96.27:0,96,1087	1/1:4,33:37:62.83:818,63,0	1/1:25,0:23:0.05:96,0,0	./.	0/0:39,0:39:77.41:0,77,924	0/0:47,0:47:99:0,114,1371	0/0:57,0:57:99:0,126,1430	./.	1/1:5,41:46:72:912,72,0	1/1:12,13:25:36.91:530,37,0	0/1:11,0:10:14.57:15,0,38	0/0:22,0:13:33.10:0,33,389	0/0:28,0:28:54.06:0,54,602	0/0:101,1:97:99:0,136,1548	0/0:36,0:36:50.86:0,51,543	0/0:31,0:31:71.99:0,72,792	0/0:39,0:42:50.43:0,50,632	0/0:18,0:18:18.01:0,18,211	1/1:4,35:39:99:1277,102,0	0/0:26,0:26:63.14:0,63,739	1/1:2,11:12:27.09:351,27,0
chr10	36417756	.	GTA	G	1570.91	PASS	AB=0.748;AC=11;AF=0.196;AN=56;BaseQRankSum=1.911;DP=859;FS=15.988;HRun=0;HaplotypeScore=373.8176;InbreedingCoeff=0.5367;MQ=45.02;MQ0=4;MQRankSum=-6.718;QD=8.14;ReadPosRankSum=-0.305;VQSLOD=2.2861;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:8.70:0,9,73	0/0:14,0:14:29.74:0,30,173	0/0:37,0:18:18.46:0,18,632	0/0:30,0:18:38.72:0,39,577	0/1:8,21:29:8.48:40,0,8	0/0:11,0:11:7.86:0,8,70	0/0:20,0:20:7.78:0,8,75	0/0:44,0:36:84.55:0,85,712	1/1:4,26:30:22.18:194,22,0	0/0:39,0:39:94.77:0,95,1552	0/1:23,0:23:0.25:1,0,0	0/0:44,0:44:75.52:0,76,510	0/0:48,1:49:84.66:0,85,656	0/0:56,0:56:80.93:0,81,700	0/0:22,0:22:11.83:0,12,116	0/1:9,33:42:16.36:336,0,16	1/1:9,14:22:28.89:413,29,0	0/1:9,0:8:17.61:18,0,75	0/0:20,0:17:41.13:0,41,419	0/0:28,0:28:51.21:0,51,404	0/0:94,0:94:96.24:0,96,871	0/0:28,0:28:37.95:0,38,231	0/0:29,0:29:43.35:0,43,263	0/0:41,1:42:48.61:0,49,394	0/0:14,1:15:14.42:0,14,101	1/1:11,20:30:40.29:629,40,0	0/0:13,0:13:30.43:0,30,182	0/1:2,4:6:2.75:101,0,3
chr10	36417763	.	TGTGA	T	14768.59	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-5.769;DP=902;FS=0.472;HRun=0;HaplotypeScore=357.4705;InbreedingCoeff=0.9259;MQ=44.70;MQ0=10;MQRankSum=3.771;QD=21.85;ReadPosRankSum=3.618;VQSLOD=3.3176;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:10.68:0,11,104	1/1:1,13:14:30.10:538,30,0	0/0:39,0:15:26.93:0,27,703	0/0:27,0:16:27.69:0,28,449	1/1:31,0:31:5.72:66,6,0	0/0:11,0:11:8.24:0,8,66	0/0:19,0:19:6.21:0,6,82	1/1:8,37:35:87.11:1235,87,0	1/1:34,0:34:34.87:523,35,0	0/0:41,0:41:99:0,105,2025	0/0:26,0:26:10.82:0,11,43	1/1:4,41:45:65.93:1176,66,0	1/1:5,42:47:98.89:1700,99,0	1/1:7,47:54:74.92:1334,75,0	0/0:23,0:23:12.21:0,12,149	1/1:45,0:45:64.60:913,65,0	1/1:24,0:23:37.04:680,37,0	0/0:11,0:10:17.31:0,17,134	1/1:7,19:22:52.23:666,52,0	1/1:2,27:29:39.13:700,39,0	1/1:17,88:105:43.07:803,43,0	1/1:8,21:29:41.50:693,41,0	1/1:1,29:30:41.81:753,42,0	1/1:24,22:46:42.64:714,43,0	1/1:2,10:12:8.99:161,9,0	1/1:35,0:34:80.59:1273,81,0	1/1:1,16:17:30.10:538,30,0	1/1:8,0:8:18.06:302,18,0
chr10	36417765	.	TGA	T	4538.30	PASS	AB=0.922;AC=30;AF=0.536;AN=56;BaseQRankSum=-0.282;DP=895;FS=2.312;HRun=0;HaplotypeScore=374.5758;InbreedingCoeff=0.2674;MQ=44.59;MQ0=11;MQRankSum=1.205;QD=6.65;ReadPosRankSum=6.547;VQSLOD=3.2886;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:10.53:0,11,79	1/1:13,0:13:28.41:144,28,0	0/0:34,2:14:5.38:0,5,554	0/0:25,1:15:31.14:0,31,491	1/1:13,21:34:0.90:107,1,0	0/1:12,0:12:1.81:2,0,55	0/0:19,0:19:6.04:0,6,70	0/1:43,0:33:22.03:311,0,22	1/1:9,26:35:34.58:291,35,0	0/0:42,0:42:99:0,109,1722	0/0:27,0:27:6.66:0,7,34	0/1:45,0:45:6.08:243,0,6	0/1:46,0:46:18.47:329,0,18	1/1:51,0:51:48.53:327,49,0	0/0:23,0:23:14.86:0,15,137	0/1:12,33:45:6.45:418,0,6	1/1:13,11:23:33.83:367,34,0	0/0:11,0:10:17.53:0,18,167	0/1:25,0:21:17.36:234,0,17	0/1:29,0:29:58.60:142,0,59	0/1:102,0:102:74.76:163,0,75	1/1:30,0:30:28.55:207,29,0	1/1:30,0:30:8.09:167,8,0	0/1:44,1:45:33.29:176,0,33	1/1:11,1:12:8.23:43,8,0	1/1:16,20:34:37.43:593,37,0	1/1:17,0:17:28.44:144,28,0	0/1:4,4:8:0.75:132,0,1
chr10	36417769	.	TGA	T	2884.71	PASS	AB=0.986;AC=28;AF=0.500;AN=56;BaseQRankSum=4.428;DP=897;FS=10.100;HRun=0;HaplotypeScore=379.6172;InbreedingCoeff=0.2350;MQ=44.20;MQ0=12;MQRankSum=1.325;QD=4.50;ReadPosRankSum=11.632;VQSLOD=0.0446;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:10.53:0,11,75	1/1:13,0:13:28.02:134,28,0	0/0:39,0:15:29.64:0,30,609	0/0:28,0:16:17.03:0,17,409	0/0:33,0:33:15.64:0,16,118	0/1:12,0:12:1.72:2,0,21	0/0:18,0:18:6.03:0,6,44	0/1:43,0:34:76.04:224,0,76	0/1:37,0:37:43.51:78,0,44	0/0:43,0:43:93.76:0,94,1441	0/0:32,0:32:9.37:0,9,46	1/1:43,0:43:61.03:294,61,0	1/1:45,0:45:55.54:385,56,0	1/1:47,0:47:69.99:340,70,0	0/0:23,0:23:16.37:0,16,110	0/1:47,0:47:99:110,0,153	0/1:20,2:21:83.63:204,0,84	0/0:10,0:9:5.84:0,6,80	0/1:22,1:18:56.63:129,0,57	1/1:29,0:29:36.37:174,36,0	0/1:97,2:98:91.37:144,0,91	0/1:31,0:31:72.78:136,0,73	1/1:30,0:30:7.05:153,7,0	1/1:41,3:44:9.24:151,9,0	0/1:13,0:13:23.38:28,0,23	0/1:38,0:36:99:221,0,118	1/1:18,0:18:7.26:109,7,0	1/1:7,0:7:15.29:60,15,0
chr10	36417781	.	T	TGTGTGA	4103.46	PASS	AB=0.646;AC=12;AF=0.214;AN=56;BaseQRankSum=-3.207;DP=983;FS=4.101;HRun=0;HaplotypeScore=441.5580;InbreedingCoeff=0.7269;MQ=43.79;MQ0=18;MQRankSum=-5.513;QD=23.32;ReadPosRankSum=-0.121;VQSLOD=2.4703;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,14:27:8.74:153,9,0	0/0:14,0:14:32.82:0,33,529	0/0:42,0:13:8.94:0,9,346	0/0:32,0:15:23.33:0,23,450	0/0:35,0:35:28.78:0,29,566	1/1:2,8:10:5.73:173,6,0	1/1:16,3:18:5.96:112,6,0	0/0:47,0:37:94.48:0,94,1794	0/0:40,0:40:56.23:0,56,1015	1/1:20,28:49:7.32:3069,7,0	0/1:12,24:36:2.70:3,0,3	0/0:45,0:45:74.41:0,74,1342	0/0:49,0:49:99:0,114,2112	0/0:60,0:60:96.43:0,96,1664	1/1:10,16:26:8.04:280,8,0	0/0:52,0:52:94.71:0,95,1648	0/0:28,0:27:14.61:0,15,1068	0/1:5,4:8:51.27:313,0,51	0/0:26,0:19:51.17:0,51,1057	0/0:31,0:31:53.50:0,54,934	0/0:105,0:103:89.63:0,90,1759	0/0:34,0:34:59.62:0,60,1023	0/0:32,0:32:47.51:0,48,771	0/0:44,0:44:51.67:0,52,1235	0/0:15,0:15:24.07:0,24,449	0/0:41,0:40:99:0,108,2127	0/0:23,0:23:45.09:0,45,901	0/0:10,0:10:24.08:0,24,489
chr10	36417805	.	AGT	A	2276.93	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=10.119;DP=1005;FS=5.231;HRun=0;HaplotypeScore=343.6707;InbreedingCoeff=0.9493;MQ=46.40;MQ0=36;MQRankSum=-10.840;QD=14.88;ReadPosRankSum=-0.890;VQSLOD=2.1472;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,10:17:3.48:40,3,0	0/0:10,0:10:26.88:0,27,417	0/0:41,0:12:30.03:0,30,421	0/0:60,0:12:26.53:0,27,325	0/0:32,0:31:40.60:0,41,679	1/1:3,8:11:12:160,12,0	1/1:5,9:13:12.04:156,12,0	0/0:53,0:43:84.83:0,85,1317	0/0:42,0:42:83.51:0,84,1391	1/1:8,35:43:79.89:1269,80,0	1/1:4,29:33:33.05:442,33,0	0/0:48,0:47:98.38:0,98,1652	0/0:41,0:41:99:0,102,1669	0/0:60,0:59:99:0,123,2080	1/1:2,27:29:16.03:273,16,0	0/0:52,0:52:99:0,112,1842	0/0:32,0:31:60.57:0,61,1015	1/1:3,3:6:11.98:124,12,0	0/0:27,0:19:54.11:0,54,793	0/0:31,0:31:62.32:0,62,1040	0/0:114,0:111:99:0,184,3134	0/0:33,0:33:61.92:0,62,1051	0/0:30,0:29:40.96:0,41,695	0/0:52,0:52:75.74:0,76,1477	0/0:16,0:16:29.67:0,30,519	0/0:37,0:37:99:0,102,1581	0/0:30,0:30:68.76:0,69,1170	0/0:11,0:11:33.11:0,33,555
chr10	36417851	.	A	AGT	2127.89	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=12.121;DP=1119;FS=2.283;HRun=0;HaplotypeScore=311.0884;InbreedingCoeff=0.8709;MQ=51.22;MQ0=20;MQRankSum=-11.317;QD=11.89;ReadPosRankSum=-0.923;VQSLOD=2.8281;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,0:8:3.35:51,3,0	0/0:9,0:9:24.02:0,24,290	0/0:62,0:22:32.87:0,33,410	0/0:86,0:23:39.96:0,40,454	0/0:26,0:26:66.22:0,66,905	1/1:12,0:12:2.13:27,2,0	1/1:24,1:24:9.94:145,10,0	0/0:39,0:38:98.34:0,98,1300	0/0:47,0:47:99:0,112,1523	1/1:47,6:53:49.02:1656,49,0	1/1:32,2:34:1.83:14,2,0	0/0:53,0:53:99:0,130,1748	0/0:37,0:37:84.14:0,84,1082	0/0:59,0:59:99:0,147,1984	1/1:37,3:40:12.31:166,12,0	0/0:55,0:55:99:0,159,2074	0/0:41,0:41:74.69:0,75,1235	1/1:7,0:7:15.05:240,15,0	0/0:17,0:11:27.09:0,27,371	0/0:44,0:44:93.29:0,93,1260	0/0:139,0:138:99:0,281,3762	0/0:35,0:35:75.21:0,75,1009	0/0:22,0:22:51.15:0,51,701	0/0:44,0:48:99:0,105,1406	0/0:21,0:21:54.16:0,54,741	0/0:40,0:40:99:0,105,1382	0/0:34,0:34:81.27:0,81,1105	0/0:23,0:23:54.14:0,54,705
chr10	36417855	.	TGA	T	1745.06	PASS	AB=0.620;AC=12;AF=0.214;AN=56;BaseQRankSum=12.984;DP=1115;FS=5.886;HRun=0;HaplotypeScore=306.5839;InbreedingCoeff=0.7474;MQ=51.15;MQ0=22;MQRankSum=-11.472;QD=9.69;ReadPosRankSum=-0.793;VQSLOD=2.4161;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,2:6:1.67:39,2,0	0/0:8,0:8:24.08:0,24,462	0/0:58,0:19:24.29:0,24,528	0/0:87,0:20:38.22:0,38,505	0/0:24,0:24:66.23:0,66,1242	1/1:3,9:12:1.34:6,1,0	1/1:10,15:24:11.43:96,11,0	0/0:43,0:39:99:0,111,1965	0/0:46,0:46:99:0,117,2208	1/1:28,26:55:99:1487,138,0	0/1:8,23:31:0.67:1,0,2	0/0:54,0:54:99:0,138,2630	0/0:38,0:38:91:0,91,1660	0/0:58,0:58:99:0,150,2819	0/1:22,22:44:11.59:124,0,12	0/0:55,0:55:99:0,162,2919	0/0:40,0:40:92.62:0,93,1756	1/1:3,4:7:17.24:146,17,0	0/0:18,0:11:33.08:0,33,594	0/0:43,0:43:99:0,99,1820	0/0:137,0:136:99:0,288,5446	0/0:36,0:36:84.26:0,84,1529	0/0:23,0:23:54.16:0,54,1008	0/0:47,0:47:96.04:0,96,1940	0/0:21,0:21:54.19:0,54,1039	0/0:38,0:38:99:0,111,2042	0/0:34,0:34:81.28:0,81,1548	0/0:25,0:25:51.19:0,51,1176
chr10	36417859	.	TGA	T	241.21	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=10.776;DP=1121;FS=0.000;HRun=0;HaplotypeScore=310.8890;InbreedingCoeff=0.2569;MQ=51.03;MQ0=25;MQRankSum=-8.099;QD=1.80;ReadPosRankSum=-0.377;VQSLOD=1.1729;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:6,0:6:0.20:3,0,0	0/0:9,0:9:27.07:0,27,485	0/0:59,0:20:32.72:0,33,501	0/0:90,0:20:32.14:0,32,492	0/0:22,0:22:63.09:0,63,1112	0/0:11,0:11:2.23:0,2,11	1/1:26,0:26:2.46:20,2,0	0/0:44,0:39:99:0,111,1886	0/0:46,0:46:99:0,120,2114	0/1:53,0:53:87.10:304,0,87	0/0:32,0:32:2.56:0,3,15	0/0:57,0:57:99:0,147,2677	0/0:38,0:38:83.91:0,84,1726	0/0:60,0:60:99:0,156,2867	0/1:43,0:43:6.63:7,0,28	0/0:51,0:51:99:0,147,2685	0/0:40,0:40:32.90:0,33,1548	0/1:6,0:6:14.11:14,0,25	0/0:21,0:12:36.07:0,36,593	0/0:41,0:40:96.06:0,96,1792	0/0:137,0:136:99:0,285,5257	0/0:36,0:36:87.25:0,87,1544	0/0:23,0:23:54.19:0,54,1041	0/0:44,4:48:62.58:0,63,1849	0/0:23,0:23:60.19:0,60,1060	0/0:39,0:39:99:0,117,2082	0/0:35,0:35:90.08:0,90,1553	0/0:25,0:25:72.13:0,72,1259
chr10	36417863	.	T	TGTGA	2099.23	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=13.563;DP=1140;FS=4.162;HRun=0;HaplotypeScore=349.2057;InbreedingCoeff=0.8288;MQ=50.75;MQ0=23;MQRankSum=-12.138;QD=11.35;ReadPosRankSum=-0.304;VQSLOD=2.3703;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:6,0:6:0.96:32,1,0	0/0:10,0:10:27.09:0,27,501	0/0:60,0:19:34.92:0,35,408	0/0:84,0:19:25.71:0,26,429	0/0:24,0:24:57.14:0,57,997	1/1:12,0:12:3.46:56,3,0	1/1:26,0:26:11.12:91,11,0	0/0:51,0:41:99:0,99,1766	0/0:46,0:46:99:0,111,1911	1/1:54,3:57:99:1672,134,0	1/1:29,2:31:3.47:54,3,0	0/0:56,0:56:99:0,147,2625	0/0:40,0:40:76.39:0,76,1638	0/0:59,0:59:99:0,153,2689	1/1:45,2:47:0.43:137,0,0	0/0:54,0:54:99:0,147,2573	0/0:44,0:44:58.68:0,59,1476	1/1:6,0:6:14.98:222,15,0	0/0:20,0:12:33.09:0,33,555	0/0:39,0:38:96.29:0,96,1726	0/0:139,0:139:99:0,289,5185	0/0:35,0:35:84.26:0,84,1474	0/0:22,0:22:54.19:0,54,1005	0/0:49,0:49:96.73:0,97,1846	0/0:22,0:22:60.18:0,60,1029	0/0:42,0:42:99:0,123,2096	0/0:33,0:33:90.21:0,90,1514	0/0:24,0:24:66.20:0,66,1142
chr10	36417873	.	TGA	T	1243.36	PASS	AB=0.792;AC=13;AF=0.232;AN=56;BaseQRankSum=13.500;DP=1129;FS=0.000;HRun=0;HaplotypeScore=312.7696;InbreedingCoeff=0.6525;MQ=50.23;MQ0=23;MQRankSum=-11.424;QD=5.12;ReadPosRankSum=-0.918;VQSLOD=1.9209;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,2:12:2.53:42,3,0	0/0:13,0:13:39.13:0,39,739	0/1:54,1:19:9.10:9,0,259	0/0:80,0:16:25.86:0,26,332	0/0:23,0:23:63.21:0,63,1187	1/1:4,7:11:1.38:6,1,0	1/1:16,12:28:7.02:76,7,0	0/0:50,0:38:99:0,105,1861	0/0:44,0:44:99:0,108,1840	1/1:32,24:55:64.79:1123,65,0	0/1:13,12:25:0.05:0,0,2	0/0:55,0:55:99:0,150,2747	0/0:39,0:39:95.12:0,95,1875	0/0:60,0:60:99:0,153,2691	0/1:29,19:48:16.60:34,0,17	0/0:53,0:53:99:0,153,2764	0/0:43,3:46:18.70:0,19,1596	1/1:3,4:7:14.25:107,14,0	0/0:22,0:16:42.11:0,42,743	0/0:41,0:40:99:0,105,1927	0/0:139,0:139:99:0,303,5619	0/0:33,0:33:87.28:0,87,1615	0/0:19,0:19:54.18:0,54,1025	0/0:51,0:51:99:0,102,1929	0/0:21,0:21:57.17:0,57,1008	0/0:44,1:45:99:0,129,2420	0/0:28,0:28:75.26:0,75,1427	0/0:24,0:24:69.24:0,69,1326
chr10	36417881	.	AGT	A	1080.39	PASS	AB=0.778;AC=12;AF=0.214;AN=56;BaseQRankSum=11.795;DP=1116;FS=3.295;HRun=0;HaplotypeScore=309.0025;InbreedingCoeff=0.5102;MQ=49.57;MQ0=27;MQRankSum=-9.518;QD=4.03;ReadPosRankSum=-1.189;VQSLOD=2.1826;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,8:13:3.17:15,3,0	0/0:14,0:14:36.11:0,36,596	0/0:54,0:16:5.86:0,6,233	0/1:76,0:14:0.93:1,0,96	0/0:24,0:24:66.23:0,66,1141	1/1:8,5:13:5.44:43,5,0	1/1:19,10:29:15.48:116,15,0	0/0:47,0:35:90.29:0,90,1467	0/0:41,1:42:54.47:0,54,1501	0/1:37,24:60:99:893,0,113	0/1:14,8:22:0.11:0,0,3	0/0:51,0:51:99:0,129,2222	0/0:43,0:43:99:0,117,1887	0/0:53,0:53:99:0,139,2291	0/1:23,24:47:12.48:80,0,12	0/0:51,0:51:99:0,132,2211	0/0:43,0:43:81.19:0,81,1426	1/1:4,3:7:0.17:72,0,0	0/0:22,0:17:45.09:0,45,714	0/0:41,0:40:99:0,108,1869	0/0:140,0:140:99:0,290,4879	0/0:31,0:31:78.27:0,78,1343	0/0:23,0:23:63.20:0,63,1034	0/0:46,0:46:90.80:0,91,1565	0/0:19,0:19:48.16:0,48,819	0/0:50,0:50:99:0,135,2232	0/0:27,0:27:78.17:0,78,1189	0/0:27,0:27:75.24:0,75,1251
chr10	36417887	.	T	TGA	429.59	PASS	AB=0.982;AC=12;AF=0.214;AN=56;BaseQRankSum=8.886;DP=1122;FS=8.953;HRun=0;HaplotypeScore=320.1724;InbreedingCoeff=0.4352;MQ=50.37;MQ0=25;MQRankSum=-7.589;QD=1.79;ReadPosRankSum=-1.784;VQSLOD=0.6627;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:13:4.07:55,4,0	0/0:13,0:13:36.11:0,36,529	0/1:46,0:12:16.62:17,0,217	0/0:66,0:10:7.74:0,8,95	0/0:25,0:25:69.22:0,69,1033	1/1:13,0:13:2.21:44,2,0	1/1:27,2:29:8.62:200,9,0	0/0:48,0:36:92.56:0,93,1332	0/0:41,0:41:84.88:0,85,1400	0/1:59,2:60:99:143,0,314	1/1:24,0:24:1.68:40,2,0	0/0:50,0:50:99:0,131,1970	0/0:45,0:45:99:0,125,1747	0/0:57,0:57:99:0,151,2130	0/1:45,1:46:21.42:64,0,21	0/0:53,0:53:99:0,134,1994	0/0:44,0:44:82.67:0,83,1317	0/1:7,0:7:5.11:16,0,5	0/0:22,0:18:51.03:0,51,679	0/0:41,0:40:99:0,114,1701	0/0:146,0:145:99:0,311,4486	0/0:33,0:33:93.25:0,93,1315	0/0:23,0:23:68.56:0,69,963	0/0:46,0:46:99:0,101,1463	0/0:21,0:21:53.90:0,54,777	0/0:55,0:55:99:0,150,2125	0/0:27,0:27:81.07:0,81,1104	0/0:25,0:25:75.24:0,75,1121
chr10	36417888	.	G	GTA	756.76	PASS	AB=0.974;AC=12;AF=0.214;AN=56;BaseQRankSum=9.786;DP=1114;FS=3.139;HRun=0;HaplotypeScore=316.7586;InbreedingCoeff=0.4235;MQ=50.41;MQ0=23;MQRankSum=-7.394;QD=3.19;ReadPosRankSum=0.594;VQSLOD=1.9648;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:13:4.03:29,4,0	0/0:12,0:12:36.11:0,36,528	0/1:46,0:12:5.41:5,0,205	0/0:66,0:11:5.41:0,5,91	0/0:25,0:25:69.22:0,69,1034	1/1:14,0:14:1.76:57,2,0	1/1:26,1:27:6.36:112,6,0	0/0:49,0:37:90.71:0,91,1303	0/0:41,0:41:93.80:0,94,1414	0/1:56,4:59:99:509,0,232	1/1:21,2:23:1.68:57,2,0	0/0:51,0:51:99:0,131,1972	0/0:44,0:45:99:0,129,1766	0/0:58,0:58:99:0,151,2124	0/1:45,2:47:28.75:50,0,29	0/0:52,0:52:99:0,136,1995	0/0:44,0:44:97.08:0,97,1348	0/1:7,0:7:5.91:81,0,6	0/0:21,0:18:51.02:0,51,702	0/0:41,0:40:99:0,114,1701	0/0:142,0:141:99:0,314,4522	0/0:33,0:33:93.23:0,93,1311	0/0:24,0:24:68.95:0,69,951	0/0:45,0:45:98.56:0,99,1428	0/0:20,0:20:53.90:0,54,783	0/0:55,0:55:99:0,153,2135	0/0:27,0:27:78.05:0,78,1079	0/0:25,0:25:72.24:0,72,1095
chr10	36417899	.	T	TATGC	407.44	PASS	AB=0.880;AC=8;AF=0.143;AN=56;BaseQRankSum=7.656;DP=1069;FS=4.038;HRun=0;HaplotypeScore=344.3863;InbreedingCoeff=0.1565;MQ=49.04;MQ0=18;MQRankSum=-6.611;QD=2.31;ReadPosRankSum=-3.664;VQSLOD=1.2916;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:15,2:17:13.24:13,0,18	0/0:14,0:14:42.14:0,42,867	0/0:38,0:9:17.72:0,18,307	0/0:48,0:11:17.36:0,17,302	0/0:22,0:22:63.20:0,63,1278	0/1:9,2:11:24.06:47,0,24	0/1:21,1:22:0.96:17,0,1	0/0:44,0:32:87.75:0,88,1740	0/0:44,0:44:99:0,104,2054	0/1:53,3:55:99:301,0,1388	1/1:16,5:21:2.93:23,3,0	0/0:48,0:48:99:0,126,2537	0/0:45,0:45:99:0,129,2514	0/0:59,0:59:99:0,144,2699	0/1:39,3:42:14.72:15,0,89	0/0:51,0:51:99:0,135,2756	0/0:42,0:42:45.53:0,46,1670	0/1:4,3:7:27.36:122,0,27	0/0:23,0:22:66.20:0,66,1340	0/0:41,0:41:99:0,117,2360	0/0:141,0:140:99:0,286,5767	0/0:35,0:35:93.29:0,93,1871	0/0:25,0:25:75.26:0,75,1542	0/0:44,0:44:94.28:0,94,1951	0/0:20,0:20:57.20:0,57,1173	0/0:57,0:57:99:0,162,3153	0/0:26,0:26:75.19:0,75,1451	0/0:25,0:25:75.22:0,75,1492
chr10	36417919	.	AGT	A	1325.80	PASS	AB=0.537;AC=12;AF=0.214;AN=56;BaseQRankSum=10.951;DP=979;FS=10.310;HRun=0;HaplotypeScore=277.2943;InbreedingCoeff=0.7341;MQ=50.89;MQ0=8;MQRankSum=-10.072;QD=8.61;ReadPosRankSum=-1.052;VQSLOD=1.8869;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:3,13:16:7.38:29,0,7	0/0:15,0:15:42.14:0,42,721	0/0:32,0:9:11.71:0,12,159	0/0:36,0:14:23.71:0,24,272	0/0:30,0:30:75.26:0,75,1276	1/1:1,9:10:3.45:35,3,0	1/1:14,13:27:4.74:40,5,0	0/0:43,0:39:90.31:0,90,1536	0/0:41,1:41:72.68:0,73,1443	1/1:13,35:46:70.01:1067,70,0	1/1:4,9:13:0.38:1,0,0	0/0:46,0:46:96.04:0,96,1595	0/0:42,1:43:72.94:0,73,1492	0/0:47,0:47:79.27:0,79,1284	0/1:3,32:35:0.07:162,0,0	0/0:49,0:49:95.92:0,96,1565	0/0:44,0:43:99:0,102,1529	1/1:1,4:5:12.04:142,12,0	0/0:29,0:24:60.17:0,60,936	0/0:37,0:37:81.26:0,81,1358	0/0:114,0:113:99:0,195,3235	0/0:34,0:34:78.08:0,78,1322	0/0:23,0:23:69.20:0,69,1125	0/0:43,0:43:86.97:0,87,1390	0/0:18,0:18:42.09:0,42,697	0/0:57,0:57:99:0,147,2405	0/0:20,0:20:42.14:0,42,714	0/0:23,0:23:60.19:0,60,1001
chr10	36417929	.	AGT	A	1232.83	PASS	AB=0.587;AC=12;AF=0.214;AN=56;BaseQRankSum=9.839;DP=996;FS=16.043;HRun=0;HaplotypeScore=271.7739;InbreedingCoeff=0.6700;MQ=49.59;MQ0=9;MQRankSum=-9.645;QD=7.13;ReadPosRankSum=-0.832;VQSLOD=1.9383;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:7,13:19:22.55:30,0,23	0/0:17,0:17:45.14:0,45,722	0/0:30,0:5:14.63:0,15,164	0/0:35,0:13:23.59:0,24,257	0/0:34,0:34:81.24:0,81,1318	1/1:2,9:11:3.46:35,3,0	1/1:11,23:34:2.94:35,3,0	0/0:51,0:46:99:0,108,1816	0/0:41,0:40:85.91:0,86,1439	1/1:16,35:48:46.70:996,47,0	1/1:0,9:9:0.43:1,0,0	0/0:42,0:42:90.52:0,91,1541	0/0:43,0:43:89.75:0,90,1474	0/0:45,0:45:78.32:0,78,1268	0/1:9,29:38:6.03:103,0,6	0/0:46,0:46:77.87:0,78,1316	0/0:46,0:45:99:0,110,1741	1/1:6,4:10:15.05:184,15,0	0/0:28,0:18:51.17:0,51,847	0/0:36,0:37:72.02:0,72,1124	0/0:100,0:100:99:0,165,2840	0/0:34,0:34:68.80:0,69,1203	0/0:24,0:24:69.22:0,69,1134	0/0:45,0:45:99:0,99,1581	0/0:17,0:17:36.07:0,36,591	0/0:68,0:67:99:0,175,2870	0/0:17,0:17:39.13:0,39,657	0/0:23,0:22:51.17:0,51,879
chr10	36417970	.	ATGTGTGTGTGAG	A	3953.75	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-0.773;DP=916;FS=6.454;HRun=0;HaplotypeScore=355.4891;InbreedingCoeff=0.9371;MQ=45.56;MQ0=21;MQRankSum=-3.435;QD=15.15;ReadPosRankSum=-3.321;VQSLOD=0.7488;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:40.10:0,40,2224	1/1:3,9:12:20.99:456,21,0	0/0:44,0:12:7.65:0,8,374	0/0:41,0:15:12.47:0,12,747	0/0:36,0:36:81.22:0,81,3724	0/0:17,0:17:11.81:0,12,528	0/0:49,0:49:19.77:0,20,1068	1/1:35,1:29:24.08:462,24,0	0/0:36,0:37:73.33:0,73,3138	0/0:53,0:50:99:0,105,4859	0/0:15,0:15:16.91:0,17,1056	0/0:34,0:34:81.28:0,81,3537	1/1:16,9:25:36.07:783,36,0	1/1:22,11:33:22.44:413,22,0	0/0:31,0:30:10.53:0,11,377	0/0:37,0:37:49.47:0,49,2386	0/0:44,0:42:86.87:0,87,3890	0/0:23,0:22:48.16:0,48,2285	1/1:12,2:9:9.03:253,9,0	1/1:9,13:22:18.52:413,19,0	1/1:54,10:62:22.17:436,22,0	1/1:13,14:27:24.35:393,24,0	0/0:23,0:22:48.16:0,48,2127	0/0:48,0:47:96.16:0,96,4863	1/1:9,7:16:6.91:130,7,0	0/0:57,0:55:99:0,123,5139	1/1:7,3:10:9.03:216,9,0	0/0:22,0:20:33.08:0,33,1401
chr10	36418017	.	TAA	T	3899.78	PASS	AB=0.980;AC=15;AF=0.268;AN=56;BaseQRankSum=-1.099;DP=894;FS=8.867;HRun=2;HaplotypeScore=286.6820;InbreedingCoeff=0.8099;MQ=52.75;MQ0=13;MQRankSum=-3.537;QD=13.64;ReadPosRankSum=4.635;VQSLOD=0.3891;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:67,0:67:99:1018,116,0	0/0:13,0:13:21.16:0,21,136	0/0:38,0:16:34.35:0,34,642	0/0:46,1:33:47.55:0,48,1059	0/0:37,0:37:68.32:0,68,563	1/1:20,0:19:30.01:274,30,0	0/1:34,0:34:2.32:308,0,2	0/0:44,0:37:81.54:0,82,959	0/0:24,0:24:64.25:0,64,456	1/1:41,1:42:80.87:790,81,0	1/1:25,0:25:44.86:390,45,0	0/0:29,0:29:73.03:0,73,539	0/0:19,0:19:29.21:0,29,164	0/0:25,0:25:40.99:0,41,282	1/1:42,0:42:54.22:538,54,0	0/0:28,0:28:73.40:0,73,489	0/0:37,2:38:75.79:0,76,569	1/1:28,0:28:65.96:571,66,0	0/1:12,0:12:1.62:2,0,253	0/0:22,0:22:31.96:0,32,186	0/0:53,1:53:72.35:0,72,580	0/0:25,0:25:25.37:0,25,163	0/0:17,0:17:40.20:0,40,325	0/0:54,0:53:99:0,123,964	0/0:27,1:28:50.50:0,51,270	0/0:41,1:41:86.28:0,86,918	0/0:21,0:20:28.54:0,29,163	0/1:15,1:14:6.99:7,0,97
chr10	36418018	.	AAG	A	10966.99	PASS	AB=1.000;AC=41;AF=0.732;AN=56;BaseQRankSum=7.830;DP=886;FS=22.419;HRun=0;HaplotypeScore=254.2614;InbreedingCoeff=-0.0226;MQ=53.07;MQ0=12;MQRankSum=-0.446;QD=13.69;ReadPosRankSum=12.036;VQSLOD=2.5760;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:0,67:67:99:1894,117,0	0/1:14,0:14:4.67:117,0,5	0/0:36,0:15:34.53:0,35,503	0/0:45,1:32:59.44:0,59,879	0/1:37,0:37:93.11:217,0,93	1/1:0,20:19:30.10:484,30,0	1/1:0,31:31:39.13:628,39,0	0/1:41,0:34:71.68:72,0,295	0/1:24,0:24:31.80:173,0,32	1/1:1,39:41:99:1692,114,0	1/1:0,24:25:45.15:726,45,0	0/1:29,0:29:26.39:209,0,26	1/1:18,0:18:12.43:213,12,0	1/1:26,0:26:8.15:239,8,0	1/1:1,40:41:57.13:882,57,0	1/1:28,0:28:1.20:191,1,0	0/1:39,0:39:65.44:228,0,65	1/1:0,27:27:66.23:1068,66,0	0/1:12,0:12:50.89:51,0,78	1/1:22,0:22:11.47:209,11,0	0/1:54,0:53:99:151,0,102	1/1:25,0:25:27.28:237,27,0	0/1:17,0:17:32.49:124,0,32	0/1:55,0:54:99:321,0,123	1/1:28,0:28:47:317,47,0	0/1:42,0:41:99:148,0,184	1/1:21,0:20:44.16:226,44,0	1/1:16,0:14:32.89:152,33,0
chr10	36418019	.	AGT	A	16706.64	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=2.788;DP=879;FS=1.515;HRun=0;HaplotypeScore=232.4031;InbreedingCoeff=0.9958;MQ=53.25;MQ0=12;MQRankSum=-3.897;QD=21.07;ReadPosRankSum=5.027;VQSLOD=4.9249;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:68,0:68:96.94:976,97,0	1/1:2,12:14:30.09:370,30,0	0/0:37,0:15:27.09:0,27,404	0/0:48,0:33:58.23:0,58,785	1/1:10,27:37:66.17:805,66,0	1/1:20,0:19:30.01:272,30,0	1/1:31,0:31:38.99:346,39,0	1/1:31,11:35:48.13:573,48,0	1/1:3,19:22:57.18:707,57,0	1/1:41,0:41:98.52:805,99,0	1/1:25,0:25:45.40:376,45,0	1/1:4,25:29:69.22:856,69,0	1/1:2,16:18:48.15:595,48,0	1/1:4,21:25:60.19:744,60,0	1/1:41,0:41:54.08:533,54,0	1/1:4,23:27:66.21:818,66,0	1/1:9,31:39:72.70:894,73,0	1/1:27,0:27:65.94:566,66,0	1/1:4,8:12:21.03:232,21,0	1/1:4,17:21:48.15:595,48,0	1/1:30,24:53:48.47:571,48,0	1/1:5,18:23:45.14:555,45,0	1/1:3,14:17:36.11:443,36,0	1/1:11,43:53:99:1374,111,0	1/1:4,22:27:69.21:855,69,0	1/1:19,22:40:25.56:840,26,0	1/1:1,20:20:47.90:595,48,0	1/1:3,13:14:33.58:411,34,0
chr10	36418144	.	TAAA	T	4468.20	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-8.713;DP=515;FS=7.547;HRun=12;HaplotypeScore=141.1065;InbreedingCoeff=0.9482;MQ=67.47;MQ0=1;MQRankSum=2.637;QD=28.83;ReadPosRankSum=7.812;VQSLOD=2.3622;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:1,35:36:90.25:1137,90,0	0/0:6,0:6:12.03:0,12,152	0/0:31,1:17:2.13:0,2,497	0/0:27,0:21:41:0,41,550	0/0:11,0:19:36.08:0,36,517	1/1:0,27:27:72.23:907,72,0	1/1:4,9:13:18.02:227,18,0	0/0:29,0:29:63.21:0,63,992	0/0:8,0:12:36.12:0,36,579	1/1:5,24:29:72.15:908,72,0	1/1:4,16:20:42.06:530,42,0	0/0:9,0:9:18.06:0,18,267	0/0:12,0:12:24.06:0,24,348	0/0:6,0:7:15.02:0,15,205	1/1:5,10:15:27.06:341,27,0	0/0:7,0:13:24.08:0,24,403	0/0:8,0:11:19.31:0,19,300	1/1:2,12:14:33.07:417,33,0	0/0:17,0:18:39.13:0,39,577	0/0:17,0:18:39.13:0,39,558	0/0:11,0:10:21.06:0,21,282	0/0:18,0:18:42.13:0,42,620	0/0:20,0:20:54.13:0,54,776	0/0:13,0:13:18.06:0,18,266	0/0:15,0:15:21.06:0,21,268	0/0:10,0:31:84.28:0,84,1277	0/0:16,0:16:24.76:0,25,369	0/0:5,0:20:45.15:0,45,660
chr10	36418156	.	A	AAAC	6670.52	PASS	AB=1.000;AC=33;AF=0.589;AN=56;BaseQRankSum=-9.656;DP=485;FS=0.785;HRun=0;HaplotypeScore=119.4029;InbreedingCoeff=0.6240;MQ=78.46;MQ0=0;MQRankSum=-2.367;QD=23.65;ReadPosRankSum=-1.509;VQSLOD=4.5975;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,104,957	1/1:1,0:9:15.05:248,15,0	0/0:30,0:24:18.69:0,19,372	0/0:23,0:17:40.78:0,41,433	0/1:13,0:13:51.88:125,0,52	0/0:30,0:29:78.07:0,78,727	0/0:13,0:12:27:0,27,246	1/1:1,4:24:68.96:925,69,0	0/1:9,0:9:63.32:78,0,63	0/0:26,0:26:77.75:0,78,710	0/0:17,0:17:44.84:0,45,396	1/1:0,1:7:14.72:267,15,0	1/1:1,1:14:15.05:258,15,0	1/1:6,0:7:14.87:135,15,0	0/0:11,0:11:30.03:0,30,280	0/1:7,0:7:8.66:82,0,9	0/1:15,0:15:27.89:28,0,204	0/0:13,0:13:36.02:0,36,337	1/1:3,0:24:60.05:798,60,0	1/1:1,0:20:47.98:729,48,0	1/1:0,3:13:16.87:252,17,0	1/1:0,1:20:38.92:564,39,0	1/1:0,2:17:42.08:663,42,0	1/1:1,1:9:15.05:272,15,0	1/1:0,1:14:18.06:342,18,0	0/1:27,0:27:71.52:284,0,72	1/1:0,0:17:18.12:299,18,0	1/1:15,0:15:41.46:320,41,0
chr10	36418336	.	G	GA	21263.07	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-0.412;DP=701;FS=0.793;HRun=6;HaplotypeScore=98.4586;InbreedingCoeff=0.9988;MQ=76.84;MQ0=0;MQRankSum=-8.305;QD=31.93;ReadPosRankSum=4.844;VQSLOD=4.3696;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,40:41:99:1396,111,0	1/1:2,16:18:42.13:528,42,0	0/0:26,0:26:47.97:0,48,462	0/0:9,0:9:23.99:0,24,229	1/1:1,18:19:51.16:642,51,0	1/1:5,23:28:63.20:792,63,0	1/1:1,23:24:60.19:755,60,0	1/1:6,32:38:93.22:1090,93,0	1/1:2,21:23:57.18:717,57,0	1/1:1,34:35:99:1283,102,0	1/1:1,15:16:42.13:526,42,0	1/1:1,17:18:39.12:491,39,0	1/1:4,18:22:45.14:566,45,0	1/1:0,20:20:54.17:679,54,0	1/1:1,23:24:63.20:793,63,0	1/1:1,19:20:54.17:679,54,0	1/1:4,23:27:57.18:717,57,0	1/1:3,20:23:57.18:717,57,0	1/1:4,30:34:90.25:1095,90,0	1/1:4,32:36:90.29:1128,90,0	1/1:1,22:23:54.17:679,54,0	1/1:1,16:17:42.13:528,42,0	1/1:0,19:19:57.18:717,57,0	1/1:4,23:27:69.22:868,69,0	1/1:2,23:25:69.22:864,69,0	1/1:4,37:41:99:1351,111,0	1/1:2,28:30:81.26:1019,81,0	1/1:0,18:18:51.16:642,51,0
chr10	36419295	.	TCACA	T	10350.64	PASS	AB=0.569;AC=48;AF=0.857;AN=56;BaseQRankSum=1.827;DP=790;FS=6.799;HRun=0;HaplotypeScore=240.8511;InbreedingCoeff=0.4166;MQ=52.66;MQ0=6;MQRankSum=-0.166;QD=14.34;ReadPosRankSum=4.609;VQSLOD=3.6950;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:17,42:60:66.22:1081,66,0	1/1:2,10:12:14.97:244,15,0	0/0:21,0:3:2.90:0,3,16	0/0:25,0:8:8.97:0,9,106	1/1:8,0:30:3.34:22,3,0	1/1:2,31:33:60.20:984,60,0	1/1:9,27:36:24.07:379,24,0	1/1:22,1:23:10.17:199,10,0	1/1:9,0:32:39:355,39,0	1/1:7,29:36:83.84:1218,84,0	1/1:7,17:24:27.09:438,27,0	1/1:12,27:39:36.11:591,36,0	1/1:6,17:23:33.16:518,33,0	1/1:3,19:23:32.78:541,33,0	1/1:7,17:24:27.09:440,27,0	1/1:8,0:37:48.05:448,48,0	0/1:7,0:25:17.31:95,0,17	1/1:8,19:27:35.15:568,35,0	1/1:11,12:23:35.02:435,35,0	1/1:8,21:29:5.30:280,5,0	0/0:12,10:22:2.97:0,3,20	1/1:9,22:31:6.49:100,6,0	1/1:5,11:16:2.89:49,3,0	1/1:16,25:41:6.02:98,6,0	1/1:1,26:27:26.92:442,27,0	0/1:7,0:34:26.21:355,0,26	1/1:6,22:27:26.97:402,27,0	1/1:0,0:8:8.50:65,9,0
chr10	36420116	.	ACT	A	5534.85	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=12.597;DP=640;FS=3.659;HRun=0;HaplotypeScore=80.4552;InbreedingCoeff=0.9927;MQ=89.05;MQ0=0;MQRankSum=-3.121;QD=38.17;ReadPosRankSum=3.888;VQSLOD=6.7954;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,102,1745	0/0:7,0:7:21.07:0,21,378	0/0:21,0:21:57.19:0,57,998	0/0:26,0:26:54.61:0,55,1112	1/1:2,22:24:57.19:798,57,0	0/0:21,0:21:60.21:0,60,1080	0/0:30,0:30:87.30:0,87,1557	0/0:35,0:35:96.32:0,96,1674	1/1:0,23:23:66.22:924,66,0	0/0:27,0:27:78.26:0,78,1378	0/0:13,0:13:36.12:0,36,648	0/0:44,0:44:99:0,126,2260	0/0:14,0:14:33.11:0,33,580	0/0:23,0:23:66.23:0,66,1174	0/0:21,0:21:63.22:0,63,1128	1/1:2,20:22:60.20:840,60,0	1/1:1,49:50:99:1933,138,0	0/0:26,0:26:72.25:0,72,1288	0/0:21,0:21:60.20:0,60,1046	0/0:12,0:12:33.11:0,33,594	0/0:33,0:32:84.29:0,84,1512	0/0:12,0:12:36.11:0,36,618	0/0:12,0:12:36.12:0,36,648	0/0:20,0:20:54.19:0,54,972	0/0:14,0:14:39.13:0,39,703	1/1:2,20:22:63.21:871,63,0	0/0:28,0:28:81.28:0,81,1457	1/1:0,4:4:12.04:168,12,0
chr10	36420719	.	T	TACACACACAC	2412.60	PASS	AB=0.947;AC=26;AF=0.464;AN=56;BaseQRankSum=-8.864;DP=621;FS=5.607;HRun=0;HaplotypeScore=238.7722;InbreedingCoeff=0.2427;MQ=62.05;MQ0=7;MQRankSum=-1.160;QD=6.25;ReadPosRankSum=-6.621;VQSLOD=0.5459;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:25:45.22:184,0,45	0/0:14,0:14:5.62:0,6,612	0/0:39,0:20:59.91:0,60,904	0/0:33,0:16:48.03:0,48,862	0/1:24,0:25:41.30:41,0,423	1/1:14,0:14:12.46:164,12,0	1/1:11,0:11:9.36:75,9,0	0/1:26,0:25:99:131,0,142	0/0:21,0:24:35.61:0,36,769	1/1:24,0:21:31.76:426,32,0	1/1:11,0:11:11.50:129,12,0	1/1:1,8:14:3.01:96,3,0	0/0:30,0:31:40.17:0,40,896	0/0:20,0:20:6.21:0,6,655	1/1:19,0:19:20.92:237,21,0	0/0:23,0:25:47.50:0,48,942	0/1:25,0:30:99:109,0,664	1/1:18,0:20:25.78:387,26,0	0/1:14,0:14:33.22:33,0,250	0/0:25,0:27:25.85:0,26,1035	0/1:42,0:45:77.52:78,0,1214	0/1:18,0:19:13.02:13,0,509	1/1:11,0:10:11.24:111,11,0	0/1:8,22:35:0.48:143,0,0	0/1:19,0:19:99:104,0,512	0/1:21,0:21:99:140,0,161	0/0:15,0:15:42.10:0,42,911	0/0:4,0:7:15.03:0,15,279
chr10	36420720	.	T	TCACA	1557.54	PASS	AB=0.957;AC=21;AF=0.404;AN=52;BaseQRankSum=-3.179;DP=684;FS=1.277;HRun=0;HaplotypeScore=215.5731;InbreedingCoeff=0.4850;MQ=60.00;MQ0=8;MQRankSum=-1.363;QD=4.76;ReadPosRankSum=-5.091;VQSLOD=1.2501;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:30:5.18:141,5,0	0/0:14,0:14:30.10:0,30,385	./.	./.	0/1:25,0:24:0.99:1,0,217	1/1:22,0:21:11.93:142,12,0	0/1:13,6:22:0.02:0,0,0	0/0:26,0:24:6.71:0,7,67	0/0:25,0:25:13.53:0,14,355	1/1:33,0:30:38.79:501,39,0	0/1:15,0:15:10.19:20,0,10	1/1:17,0:17:3.01:52,3,0	0/0:32,0:32:37.07:0,37,483	0/0:21,0:21:30.05:0,30,378	1/1:22,0:22:12.89:148,13,0	0/0:27,0:27:45:0,45,507	0/1:31,0:30:99:174,0,340	1/1:25,0:24:17.81:424,18,0	0/1:14,0:14:10.87:11,0,123	0/0:29,0:29:48.12:0,48,587	0/0:46,0:46:51.07:0,51,731	0/1:20,0:20:17.18:17,0,267	1/1:15,0:14:5.87:97,6,0	0/1:35,0:34:0.04:0,0,0	0/0:18,0:18:7.58:0,8,276	0/0:25,0:25:20.86:0,21,214	0/0:15,0:15:42.08:0,42,515	0/0:7,0:7:15.03:0,15,160
chr10	36420806	.	A	AAAAGAGG	9222.30	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-3.480;DP=618;FS=0.000;HRun=0;HaplotypeScore=189.3122;InbreedingCoeff=0.9990;MQ=85.73;MQ0=1;MQRankSum=-13.141;QD=69.87;ReadPosRankSum=-3.564;VQSLOD=4.2024;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:54.18:0,54,1263	0/0:11,0:11:27.09:0,27,658	0/0:23,0:23:45.12:0,45,977	0/0:27,0:26:38.71:0,39,728	1/1:15,13:28:45.15:1549,45,0	0/0:19,0:19:54.17:0,54,1268	0/0:13,0:13:36.12:0,36,875	0/0:30,0:30:72.20:0,72,1603	1/1:11,11:25:42.14:1593,42,0	0/0:28,0:28:81.26:0,81,1861	0/0:19,0:19:48.16:0,48,1170	0/0:16,0:16:33.10:0,33,755	0/0:27,0:27:75.26:0,75,1793	0/0:20,0:20:51.18:0,51,1241	0/0:25,0:25:72.25:0,72,1731	1/1:12,9:23:36.08:1258,36,0	1/1:3,7:11:24.08:867,24,0	0/0:30,0:29:66.18:0,66,1521	0/0:14,0:14:33.11:0,33,805	0/0:29,0:29:72.25:0,72,1755	0/0:26,0:26:69.22:0,69,1580	0/0:22,0:22:57.20:0,57,1365	0/0:12,0:12:27.08:0,27,610	0/0:23,0:23:57.19:0,57,1318	0/0:23,0:23:57.20:0,57,1347	1/1:12,16:30:75.26:2681,75,0	0/0:26,0:26:75.26:0,75,1735	1/1:4,8:15:36.12:1275,36,0
chr10	36420919	.	C	CTAGG	22254.06	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=10.874;DP=726;FS=3.416;HRun=0;HaplotypeScore=150.7157;InbreedingCoeff=0.9999;MQ=90.58;MQ0=0;MQRankSum=-13.216;QD=55.64;ReadPosRankSum=0.871;VQSLOD=6.3252;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:75.26:0,75,1350	1/1:3,9:12:33.07:799,33,0	0/0:31,0:31:78.22:0,78,1324	0/0:37,0:37:90.29:0,90,1563	1/1:3,21:25:45.15:1175,45,0	0/0:29,0:29:87.30:0,87,1566	0/0:23,0:23:66.23:0,66,1193	1/1:18,24:46:93.27:2234,93,0	1/1:7,18:25:44.82:1113,45,0	0/0:23,0:21:54.19:0,54,982	0/0:14,0:14:39.13:0,39,702	0/0:20,0:20:54.17:0,54,953	1/1:6,25:31:69.19:1723,69,0	1/1:5,10:16:36.12:846,36,0	0/0:34,0:34:99:0,99,1763	1/1:1,28:30:72.25:1882,72,0	1/1:4,13:17:38.95:1019,39,0	0/0:28,0:28:75.21:0,75,1318	1/1:9,17:26:54.18:1332,54,0	1/1:4,19:25:54.18:1371,54,0	1/1:12,21:34:59.26:1454,59,0	1/1:4,16:21:51.18:1322,51,0	0/0:17,0:17:39.13:0,39,685	0/0:42,0:42:99:0,117,2128	1/1:3,11:15:33.11:821,33,0	1/1:5,25:30:81.28:2037,81,0	1/1:3,22:27:72.22:1848,72,0	1/1:0,18:19:51.13:1276,51,0
chr10	36421179	.	TG	T	7213.93	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=15.145;DP=553;FS=2.395;HRun=7;HaplotypeScore=82.7767;InbreedingCoeff=0.9938;MQ=83.54;MQ0=0;MQRankSum=-4.108;QD=25.14;ReadPosRankSum=2.170;VQSLOD=5.4479;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:75.24:0,75,942	1/1:2,4:6:12.03:122,12,0	0/0:34,0:33:53.37:0,53,785	0/0:19,0:19:44.77:0,45,488	1/1:2,21:23:44.80:458,45,0	0/0:20,0:20:51.15:0,51,624	0/0:21,0:21:48.15:0,48,604	1/1:4,17:20:51.11:519,51,0	1/1:2,14:16:33.07:337,33,0	0/0:17,0:17:48.15:0,48,604	0/0:14,0:14:39.12:0,39,491	0/0:23,0:23:69.21:0,69,854	1/1:3,20:23:54.11:550,54,0	1/1:0,10:10:27.06:275,27,0	0/0:24,0:23:63.19:0,63,779	1/1:1,9:10:24.05:245,24,0	1/1:3,34:37:96.21:979,96,0	0/0:32,0:32:81.23:0,81,1002	1/1:0,19:19:57.13:581,57,0	1/1:1,15:16:39.09:398,39,0	1/1:5,9:14:24.05:244,24,0	1/1:1,15:16:36.08:367,36,0	0/0:8,0:8:18.06:0,18,226	0/0:26,0:26:69.21:0,69,856	1/1:0,15:15:42.09:428,42,0	1/1:4,14:18:45.10:459,45,0	1/1:1,27:28:81.18:823,81,0	1/1:1,14:15:42.10:428,42,0
chr10	36421345	.	TGGTTC	T	263.33	PASS	AB=0.966;AC=14;AF=0.250;AN=56;BaseQRankSum=8.105;DP=435;FS=55.777;HRun=0;HaplotypeScore=95.5757;InbreedingCoeff=-0.2018;MQ=45.23;MQ0=52;MQRankSum=-3.904;QD=1.41;ReadPosRankSum=3.969;VQSLOD=-0.5484;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:38:84.41:0,84,1420	0/1:9,0:8:5.14:5,0,85	0/0:12,0:8:7.51:0,8,81	0/0:11,0:4:2.20:0,2,58	0/1:17,1:17:37.01:37,0,190	0/0:15,0:14:35.61:0,36,638	0/0:18,0:16:47.01:0,47,791	0/0:16,0:14:24.96:0,25,289	0/1:15,0:12:25.15:25,0,100	0/0:8,0:8:24.08:0,24,479	0/0:13,0:13:29.94:0,30,585	0/0:16,0:15:26.86:0,27,705	0/1:14,0:13:39.67:40,0,153	0/0:12,0:10:8.31:0,8,94	0/0:15,0:12:24.05:0,24,466	0/1:12,1:12:52.52:53,0,73	0/1:18,0:12:58.06:58,0,99	0/1:20,0:15:1.57:2,0,494	0/0:22,0:18:47.18:0,47,418	0/1:17,0:16:29.65:30,0,143	1/1:6,0:4:1.25:3,1,0	0/1:7,2:9:49.51:50,0,53	0/0:17,0:17:21.60:0,22,590	0/0:20,0:14:25.83:0,26,489	0/1:10,0:8:0.97:1,0,97	0/1:13,0:11:1.42:1,0,178	0/1:23,0:22:95.12:95,0,139	0/0:7,0:4:4.36:0,4,49
chr10	36421350	.	C	CT	3782.69	PASS	AC=32;AF=0.593;AN=54;BaseQRankSum=-0.032;DP=445;FS=4.236;HRun=7;HaplotypeScore=64.5102;InbreedingCoeff=0.8976;MQ=39.09;MQ0=53;MQRankSum=-1.659;QD=15.89;ReadPosRankSum=0.255;VQSLOD=3.5912;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:40:47.97:0,48,441	1/1:1,8:8:24.07:289,24,0	0/0:4,0:4:2.97:0,3,20	./.	1/1:7,11:16:19.53:188,20,0	0/0:13,0:12:21.01:0,21,203	0/0:20,0:18:32.94:0,33,309	1/1:9,9:16:30.09:360,30,0	1/1:7,12:15:24.96:289,25,0	0/0:12,0:12:20.95:0,21,188	0/0:13,0:13:24.03:0,24,228	0/0:18,0:17:29.60:0,30,288	1/1:9,7:15:19.87:223,20,0	1/1:9,3:10:11.90:124,12,0	0/0:14,0:12:18.02:0,18,170	1/1:8,6:13:21.06:251,21,0	1/1:10,10:14:24.54:290,25,0	0/0:20,0:15:21.01:0,21,201	1/1:14,10:21:33.06:372,33,0	1/1:6,11:16:18.06:217,18,0	1/1:5,2:5:3.01:36,3,0	1/1:4,5:9:18.05:208,18,0	0/0:15,0:14:14.94:0,15,139	0/0:21,0:15:20.84:0,21,202	1/1:5,5:8:3.01:36,3,0	1/1:7,6:11:18.06:217,18,0	1/1:8,16:23:48.15:579,48,0	1/1:5,2:4:9.02:102,9,0
chr10	36421713	.	TGG	T	2475.81	PASS	AB=0.720;AC=31;AF=0.554;AN=56;BaseQRankSum=-0.170;DP=339;FS=21.431;HRun=12;HaplotypeScore=55.7675;InbreedingCoeff=0.4953;MQ=72.53;MQ0=1;MQRankSum=-0.704;QD=10.63;ReadPosRankSum=7.029;VQSLOD=-0.0209;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:25:8.93:0,9,127	1/1:1,1:2:3.01:31,3,0	0/0:10,0:9:4.77:0,5,112	0/0:9,0:10:11.90:0,12,97	0/0:3,0:3:5.99:0,6,49	0/1:5,1:6:3.30:25,0,3	0/1:7,3:19:59.77:60,0,63	1/1:11,10:21:8.82:280,9,0	0/0:10,0:10:24.01:0,24,269	0/0:4,0:7:10.46:0,10,47	0/1:2,1:5:9.60:23,0,10	1/1:3,11:15:20.77:195,21,0	1/1:6,9:15:27.04:272,27,0	1/1:3,8:13:23.32:206,23,0	0/1:13,2:20:25.61:26,0,128	0/0:11,0:11:26.84:0,27,300	0/0:21,0:22:27.07:0,27,342	0/1:11,1:16:24.93:25,0,38	1/1:10,2:13:5.33:90,5,0	1/1:3,1:4:6.01:60,6,0	1/1:13,10:24:15.09:299,15,0	1/1:1,2:3:3.01:30,3,0	1/1:0,8:8:18.03:183,18,0	1/1:10,12:22:36.06:366,36,0	1/1:7,4:11:17.99:172,18,0	0/0:4,0:4:6.02:0,6,88	1/1:3,11:16:35.53:329,36,0	0/0:2,0:2:6.02:0,6,74
chr10	36421724	.	GGA	G	554.76	PASS	AB=0.942;AC=14;AF=0.250;AN=56;BaseQRankSum=8.885;DP=362;FS=41.547;HRun=0;HaplotypeScore=63.1988;InbreedingCoeff=-0.1838;MQ=78.98;MQ0=1;MQRankSum=-0.157;QD=2.98;ReadPosRankSum=8.618;VQSLOD=-0.6587;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:61.81:0,62,496	1/1:1,0:1:2.22:7,2,0	0/0:14,0:12:16.02:0,16,191	0/0:15,0:13:1.10:0,1,182	0/0:5,0:5:11.99:0,12,136	0/0:8,0:7:17.09:0,17,143	0/0:19,0:19:29.74:0,30,235	0/1:21,1:22:52.52:53,0,245	0/0:11,0:11:24.06:0,24,323	0/0:12,0:12:28.44:0,28,246	0/0:7,0:7:2.35:0,2,42	0/1:17,0:17:48.91:49,0,77	0/1:16,3:19:71.64:81,0,72	0/1:14,1:15:41.86:42,0,70	0/0:19,0:19:0.96:0,1,189	0/0:10,0:10:28.55:0,29,360	0/0:15,0:15:38.95:0,39,476	0/0:12,0:12:23.21:0,23,182	0/1:18,0:18:3.39:3,0,306	0/1:8,1:9:13.51:14,0,113	0/1:22,4:26:99:114,0,136	0/1:3,0:3:19.80:24,0,20	0/1:9,0:9:0.68:63,0,1	0/1:18,3:21:78.28:130,0,78	0/1:9,1:10:19.71:63,0,20	0/0:4,0:4:9.02:0,9,127	0/1:16,0:16:46.52:58,0,47	0/0:3,0:3:9.03:0,9,123
chr10	36422555	.	TA	T	11218.33	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=9.946;DP=608;FS=7.570;HRun=5;HaplotypeScore=64.9634;InbreedingCoeff=0.9981;MQ=83.42;MQ0=0;MQRankSum=-0.351;QD=30.08;ReadPosRankSum=5.041;VQSLOD=5.1828;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,48:51:99:1565,138,0	0/0:12,0:12:36.12:0,36,489	0/0:21,0:21:41.28:0,41,582	0/0:14,0:14:29.94:0,30,355	1/1:1,29:30:69.19:782,69,0	1/1:0,22:22:63.18:714,63,0	1/1:3,27:30:75.21:850,75,0	0/0:31,0:31:87.27:0,87,1160	1/1:0,22:22:60.17:680,60,0	1/1:0,26:26:78.21:874,78,0	1/1:1,9:10:21.02:224,21,0	1/1:0,23:23:60.17:680,60,0	0/0:19,0:19:51.14:0,51,663	0/0:28,0:28:81.21:0,81,1057	1/1:0,15:15:42.12:476,42,0	1/1:2,16:18:45.13:510,45,0	1/1:3,34:37:90.26:1021,90,0	1/1:1,16:17:45.13:510,45,0	0/0:26,0:26:72.22:0,72,940	0/0:12,0:12:36.12:0,36,492	0/0:18,0:18:54.17:0,54,723	0/0:24,0:24:69.10:0,69,897	1/1:1,14:15:42.08:462,42,0	1/1:0,32:32:90.26:1020,90,0	0/0:14,0:14:30.10:0,30,410	1/1:0,19:19:57.16:646,57,0	0/0:16,0:16:42.13:0,42,556	1/1:0,6:6:18.05:204,18,0
chr10	36424279	.	CTT	C	6902.10	PASS	AB=0.919;AC=45;AF=0.804;AN=56;BaseQRankSum=-4.587;DP=560;FS=9.706;HRun=2;HaplotypeScore=80.6331;InbreedingCoeff=0.1684;MQ=68.78;MQ0=11;MQRankSum=-2.357;QD=13.40;ReadPosRankSum=2.294;VQSLOD=1.3714;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:24,1:25:45.14:305,0,45	1/1:9,0:10:29.59:210,30,0	0/0:15,0:11:19.39:0,19,281	0/0:30,0:21:25.73:0,26,395	1/1:0,0:13:7.57:62,8,0	1/1:12,0:14:35.71:286,36,0	1/1:0,22:22:6.02:95,6,0	1/1:32,0:31:91.95:675,92,0	1/1:18,0:23:65.66:511,66,0	1/1:17,0:17:23.99:302,24,0	0/1:9,0:9:56.93:87,0,57	0/1:23,0:25:39.60:285,0,40	1/1:15,0:16:32.45:249,32,0	1/1:0,24:24:5.92:95,6,0	1/1:31,2:33:5.13:521,5,0	1/1:0,1:28:21.03:216,21,0	1/1:20,0:27:80.49:625,80,0	0/1:11,1:12:2.90:219,0,3	1/1:9,0:9:20.57:142,21,0	1/1:1,0:17:8.80:69,9,0	1/1:31,0:31:46.52:406,47,0	1/1:18,0:17:18.12:237,18,0	0/1:9,0:11:7.83:145,0,8	0/1:23,0:32:99:172,0,113	1/1:1,15:15:3.01:48,3,0	1/1:1,32:32:88.30:586,88,0	1/1:8,1:11:29.70:241,30,0	0/1:1,2:6:7.82:112,0,8
chr10	36425028	.	G	GAAAGGGTCATTCAGTCCCC	46261.82	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=4.054;DP=712;FS=0.971;HRun=0;HaplotypeScore=335.0703;InbreedingCoeff=0.9144;MQ=53.76;MQ0=4;MQRankSum=-18.973;QD=160.63;ReadPosRankSum=-1.001;VQSLOD=3.8031;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,114,5302	1/1:6,4:11:27.05:2052,27,0	0/0:32,0:21:60.21:0,60,2388	0/0:22,0:17:42.14:0,42,1402	0/0:21,0:21:57.20:0,57,2570	0/0:23,0:23:63.22:0,63,3106	0/0:19,0:19:54.18:0,54,2324	1/1:28,0:24:57.17:2735,57,0	0/0:20,0:20:60.21:0,60,2945	0/0:27,0:27:75.26:0,75,3765	0/0:20,0:20:54.19:0,54,2703	0/0:33,0:33:90.29:0,90,4296	1/1:20,7:27:69.24:4759,69,0	1/1:22,13:38:96.33:7598,96,0	0/0:29,0:29:78.25:0,78,3655	0/0:27,0:27:78.24:0,78,3404	0/0:23,0:23:57.18:0,57,2597	0/1:27,0:27:99:103,0,3023	1/1:13,3:16:48.14:2386,48,0	1/1:19,18:42:99:8375,105,0	1/1:7,0:7:9.03:619,9,0	1/1:17,13:30:75.26:5978,75,0	0/0:28,0:28:81.28:0,81,4115	0/0:27,0:27:75.24:0,75,3527	1/1:21,7:29:75.26:5260,75,0	0/0:24,0:24:63.22:0,63,2961	1/1:21,7:31:87.30:6396,87,0	0/0:7,0:7:21.07:0,21,998
chr10	36425204	.	G	GA	3030.26	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=17.428;DP=598;FS=0.341;HRun=0;HaplotypeScore=163.0971;InbreedingCoeff=0.9813;MQ=85.07;MQ0=0;MQRankSum=-5.897;QD=9.15;ReadPosRankSum=6.415;VQSLOD=3.5068;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:33,0:33:58.97:306,59,0	0/0:9,0:9:27.08:0,27,361	0/0:30,0:30:86.92:0,87,1124	0/0:27,0:27:72.16:0,72,956	1/1:20,0:20:25.94:148,26,0	1/1:20,0:20:43.66:194,44,0	1/1:28,0:28:58.79:282,59,0	0/0:21,0:21:57.19:0,57,797	1/1:23,2:25:67.96:353,68,0	1/1:12,1:13:25.17:139,25,0	1/1:12,0:12:8.46:48,8,0	1/1:27,1:28:59.42:302,59,0	0/0:21,0:21:57.17:0,57,755	0/0:28,0:28:66.06:0,66,815	1/1:31,1:32:71.41:378,71,0	1/1:18,0:18:42.54:200,43,0	1/1:21,1:22:42.60:223,43,0	1/1:17,1:18:26.72:139,27,0	0/0:19,0:19:57.17:0,57,764	0/0:16,0:16:48.15:0,48,654	0/0:38,0:38:99:0,105,1370	0/0:14,0:14:36.08:0,36,453	1/1:8,0:8:10.61:46,11,0	1/1:24,0:24:36.33:172,36,0	0/0:20,0:20:57.17:0,57,764	1/1:20,0:20:51.17:266,51,0	0/0:24,0:24:69.20:0,69,926	1/1:10,0:10:13.57:63,14,0
chr10	36425206	.	G	GTA	13851.29	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=9.538;DP=609;FS=8.930;HRun=0;HaplotypeScore=143.1717;InbreedingCoeff=0.9905;MQ=83.89;MQ0=0;MQRankSum=-5.669;QD=39.80;ReadPosRankSum=5.056;VQSLOD=6.0397;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,29:35:66.22:1265,66,0	0/0:8,0:8:24.08:0,24,367	0/0:32,0:32:90.29:0,90,1303	0/0:27,0:27:75.50:0,75,1035	1/1:3,16:19:24.08:460,24,0	1/1:0,20:20:51.17:982,51,0	1/1:3,26:30:69.24:1306,69,0	0/0:22,0:22:60.18:0,60,875	1/1:3,22:27:72.25:1367,72,0	1/1:6,11:18:45.15:791,45,0	1/1:0,12:12:15.05:289,15,0	1/1:0,27:28:63.22:1200,63,0	0/0:20,0:20:51.17:0,51,778	0/0:28,0:28:54.17:0,54,800	1/1:1,29:32:75.25:1419,75,0	1/1:1,18:19:51.17:978,51,0	1/1:0,21:22:45.15:853,45,0	1/1:6,13:21:33.09:599,33,0	0/0:20,0:20:51.17:0,51,774	0/0:16,0:16:45.15:0,45,686	0/0:34,0:34:93.32:0,93,1412	0/0:12,0:12:30.10:0,30,454	1/1:2,7:10:11.98:231,12,0	1/1:0,23:23:39.13:752,39,0	0/0:19,0:19:51.15:0,51,737	1/1:2,19:22:57.19:1068,57,0	0/0:23,0:23:60.17:0,60,890	1/1:3,7:10:15.05:289,15,0
chr10	36426151	.	TTCTCTCTCTCTCTC	T	2701.74	PASS	AB=0.925;AC=18;AF=0.333;AN=54;BaseQRankSum=5.472;DP=664;FS=8.638;HRun=0;HaplotypeScore=232.9151;InbreedingCoeff=0.6484;MQ=59.23;MQ0=12;MQRankSum=-3.718;QD=12.93;ReadPosRankSum=2.589;VQSLOD=1.0407;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:35:9.45:0,9,350	0/1:6,0:5:0:0,0,0	0/0:25,0:19:2.22:0,2,7	./.	0/0:30,0:30:3.01:0,3,44	0/0:30,0:29:12.51:0,13,443	0/0:24,0:23:16.30:0,16,639	1/1:37,0:37:6:87,6,0	0/0:33,0:32:24.08:0,24,1334	0/0:29,0:29:32.65:0,33,1016	0/0:27,0:26:0:0,0,0	0/0:14,0:14:3.01:0,3,44	1/1:20,7:27:9.03:335,9,0	1/1:15,5:22:18.06:627,18,0	0/0:18,0:19:6.02:0,6,213	0/0:20,0:20:12.04:0,12,446	0/0:19,0:21:15.05:0,15,591	0/0:22,0:19:22.79:0,23,900	1/1:16,2:19:9.03:254,9,0	1/1:18,7:25:8.40:251,8,0	1/1:13,0:13:3.01:38,3,0	0/1:14,2:16:32.04:236,0,32	0/0:23,0:23:5.81:0,6,151	0/0:25,0:29:18.21:0,18,572	1/1:13,4:18:9.03:283,9,0	0/0:18,0:22:30.16:0,30,1063	1/1:11,11:24:20.86:764,21,0	0/0:21,0:24:18.90:0,19,571
chr10	36426326	.	TCACCTCCCAG	T	14424.20	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=16.931;DP=632;FS=12.572;HRun=0;HaplotypeScore=194.0177;InbreedingCoeff=0.9992;MQ=83.63;MQ0=0;MQRankSum=-16.563;QD=63.26;ReadPosRankSum=2.116;VQSLOD=3.9250;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,30:34:57.19:1776,57,0	0/0:7,0:7:21.06:0,21,829	0/0:30,0:30:90.31:0,90,4035	0/0:26,0:26:65.71:0,66,2854	0/0:14,0:14:39.13:0,39,2075	1/1:2,18:20:39.13:1239,39,0	1/1:4,27:31:54.18:1736,54,0	0/0:26,0:26:75.24:0,75,3429	0/0:23,0:23:65.50:0,65,3274	1/1:2,24:25:66.70:2054,67,0	1/1:2,15:18:42.14:1278,42,0	1/1:0,21:21:57.20:1837,57,0	0/0:23,0:23:66.23:0,66,3476	0/0:19,0:19:54.19:0,54,2702	1/1:3,13:16:33.11:1038,33,0	0/0:21,0:21:57.20:0,57,2957	0/0:35,0:35:99:0,99,4705	1/1:0,13:13:30.10:999,30,0	0/0:20,0:20:54.19:0,54,2590	0/0:18,0:18:54.19:0,54,2748	0/0:32,0:32:81.28:0,81,4067	0/0:16,0:16:45.15:0,45,2271	1/1:1,17:18:42.14:1339,42,0	1/1:4,26:31:36.12:1128,36,0	0/0:24,0:24:72.25:0,72,3728	0/0:22,0:22:66.23:0,66,3391	0/0:28,0:28:84.29:0,84,4357	0/0:20,0:20:60.21:0,60,2930
chr10	36426710	.	A	AACACACACACAC	14610.73	PASS	AB=0.794;AC=52;AF=0.929;AN=56;BaseQRankSum=-5.368;DP=743;FS=13.220;HRun=0;HaplotypeScore=208.4534;InbreedingCoeff=0.1472;MQ=51.89;MQ0=19;MQRankSum=-0.213;QD=20.64;ReadPosRankSum=2.350;VQSLOD=3.0423;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:16,17:43:6.02:290,6,0	1/1:3,0:4:2.94:18,3,0	0/1:54,0:20:21.60:22,0,370	0/0:35,0:17:9.44:0,9,97	1/1:8,1:29:8.98:220,9,0	1/1:2,12:22:18.06:727,18,0	1/1:14,10:35:15.05:454,15,0	1/1:22,0:29:39.04:737,39,0	1/1:8,0:30:36.12:1096,36,0	1/1:12,11:37:57.67:1709,58,0	1/1:4,9:19:2.72:108,3,0	1/1:5,16:29:27.09:1326,27,0	1/1:12,0:15:15.47:159,15,0	1/1:17,0:32:5.39:139,5,0	1/1:4,14:26:21.07:1119,21,0	1/1:4,0:23:33.11:1174,33,0	0/1:6,0:20:39.66:284,0,40	1/1:6,8:16:6.02:355,6,0	1/1:19,0:23:46.69:812,47,0	1/1:15,0:19:7.38:162,7,0	1/1:23,0:25:1.88:57,2,0	1/1:15,0:21:4.96:72,5,0	1/1:6,5:14:3.01:111,3,0	1/1:11,10:24:2.98:117,3,0	1/1:13,0:21:5.36:329,5,0	1/1:4,18:31:48:1727,48,0	1/1:14,0:22:26.58:523,27,0	1/1:14,9:26:15.05:766,15,0
chr10	36427370	.	G	GAC	19744.14	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=7.963;DP=505;FS=17.493;HRun=0;HaplotypeScore=174.6557;InbreedingCoeff=0.9866;MQ=72.05;MQ0=0;MQRankSum=-9.590;QD=42.46;ReadPosRankSum=4.596;VQSLOD=3.6989;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:27,1:27:60.14:1003,60,0	1/1:12,0:12:33.11:596,33,0	0/0:25,0:25:54.18:0,54,886	0/0:15,0:15:38.50:0,39,575	1/1:17,0:17:36.12:625,36,0	1/1:18,2:18:36.12:648,36,0	1/1:13,1:14:30.56:503,31,0	1/1:20,0:20:54.19:1003,54,0	1/1:21,1:21:48.16:863,48,0	1/1:17,0:17:51.17:947,51,0	1/1:20,3:23:51.17:893,51,0	1/1:18,0:18:50.76:865,51,0	1/1:8,0:9:20.66:332,21,0	1/1:26,1:27:51.17:900,51,0	1/1:16,2:18:48.16:865,48,0	1/1:25,0:25:71.83:1250,72,0	1/1:21,0:20:45.15:792,45,0	1/1:14,0:14:39.13:719,39,0	1/1:17,0:17:48.16:877,48,0	1/1:19,1:20:48.16:841,48,0	1/1:9,3:12:21.07:369,21,0	1/1:21,0:21:51.17:888,51,0	1/1:12,1:14:30.10:505,30,0	1/1:8,1:9:18.06:317,18,0	1/1:14,0:14:42.14:746,42,0	1/1:20,0:20:57.20:1047,57,0	1/1:27,0:27:57.20:1019,57,0	1/1:6,0:6:18.06:327,18,0
chr10	36427371	.	AGG	A	12784.20	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=8.632;DP=450;FS=16.409;HRun=2;HaplotypeScore=177.6815;InbreedingCoeff=0.9669;MQ=74.56;MQ0=0;MQRankSum=-9.961;QD=31.11;ReadPosRankSum=5.383;VQSLOD=3.2635;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,23:27:59.78:704,60,0	1/1:0,10:10:30.09:365,30,0	0/0:24,0:24:69.20:0,69,1226	0/0:14,0:15:38.29:0,38,720	1/1:1,15:16:36.10:414,36,0	1/1:1,15:14:30.09:374,30,0	1/1:6,8:14:33.06:389,33,0	1/1:0,18:18:48.16:667,48,0	1/1:1,18:18:48.15:594,48,0	1/1:0,16:16:48.16:660,48,0	1/1:3,16:19:51.01:568,51,0	1/1:3,11:15:39.08:487,39,0	1/1:3,7:10:18.06:221,18,0	1/1:1,21:23:48.13:575,48,0	1/1:2,14:16:45.01:530,45,0	1/1:3,20:23:63.17:799,63,0	1/1:2,17:18:42.12:520,42,0	1/1:0,10:10:30.10:413,30,0	1/1:0,13:13:35.99:461,36,0	1/1:4,14:18:42.97:549,43,0	1/1:3,4:7:12.04:145,12,0	1/1:0,17:17:51.15:602,51,0	1/1:4,9:13:30:332,30,0	1/1:1,7:8:14.88:150,15,0	1/1:0,14:14:42.13:513,42,0	1/1:0,19:19:57.19:779,57,0	1/1:1,23:24:57.18:737,57,0	1/1:0,6:6:18.06:237,18,0
chr10	36427375	.	AG	A	11810.38	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=9.135;DP=450;FS=21.621;HRun=2;HaplotypeScore=177.1880;InbreedingCoeff=0.9757;MQ=76.26;MQ0=0;MQRankSum=-9.829;QD=28.81;ReadPosRankSum=5.759;VQSLOD=2.4695;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:26,1:26:60.15:684,60,0	1/1:10,0:10:30.09:351,30,0	0/0:24,0:24:50.82:0,51,860	0/0:16,0:16:41.71:0,42,529	1/1:15,0:15:39.09:422,39,0	1/1:16,0:14:30.09:349,30,0	1/1:9,1:10:27.08:318,27,0	1/1:19,0:19:48.15:595,48,0	1/1:19,0:18:48.14:561,48,0	1/1:16,0:16:48.15:587,48,0	1/1:18,0:18:48.11:517,48,0	1/1:12,2:14:39.08:433,39,0	1/1:7,6:13:21.05:236,21,0	1/1:22,1:23:48.13:549,48,0	1/1:17,0:17:48.13:548,48,0	1/1:20,2:22:63.17:729,63,0	1/1:18,0:17:42.12:486,42,0	1/1:11,0:11:30.09:363,30,0	1/1:14,0:14:35.96:410,36,0	1/1:16,2:18:42.11:479,42,0	1/1:7,0:7:14.99:149,15,0	1/1:18,0:18:51.14:569,51,0	1/1:10,2:12:27.05:287,27,0	1/1:10,0:10:15.04:171,15,0	1/1:14,0:14:42.12:484,42,0	1/1:20,0:20:57.17:685,57,0	1/1:23,0:23:54.16:635,54,0	1/1:6,0:6:18.05:214,18,0
chr10	36427376	.	G	GACA	22239.19	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=7.705;DP=501;FS=21.412;HRun=0;HaplotypeScore=173.7948;InbreedingCoeff=0.9841;MQ=72.82;MQ0=0;MQRankSum=-9.855;QD=48.24;ReadPosRankSum=5.320;VQSLOD=4.5961;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,23:28:60.18:1194,60,0	1/1:1,10:11:33.11:650,33,0	0/0:24,0:24:51.58:0,52,1037	0/0:16,0:16:41.54:0,42,639	1/1:5,13:18:39.12:736,39,0	1/1:1,15:14:30.10:622,30,0	1/1:7,8:15:30.10:618,30,0	1/1:5,18:23:57.20:1270,57,0	1/1:3,18:20:48.16:992,48,0	1/1:3,16:19:57.15:1195,57,0	1/1:4,16:20:51.17:982,51,0	1/1:5,11:16:39.13:811,39,0	1/1:6,7:13:21.07:449,21,0	1/1:3,21:24:48.16:973,48,0	1/1:5,14:19:48.15:951,48,0	1/1:6,20:26:66.23:1388,66,0	1/1:2,17:18:45.15:894,45,0	1/1:1,10:11:30.10:657,30,0	1/1:8,13:21:51.17:1098,51,0	1/1:3,14:17:42.14:854,42,0	1/1:7,4:11:18.05:322,18,0	1/1:5,17:22:54.19:1086,54,0	1/1:6,9:15:27.08:493,27,0	1/1:3,7:10:18.06:337,18,0	1/1:1,14:15:42.14:861,42,0	1/1:3,18:21:60.20:1278,60,0	1/1:0,23:23:54.19:1142,54,0	1/1:0,6:6:18.06:387,18,0
chr10	36427786	.	GACTTCAGGAATC	G	14955.76	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=17.542;DP=693;FS=24.577;HRun=0;HaplotypeScore=245.2816;InbreedingCoeff=0.9834;MQ=62.04;MQ0=0;MQRankSum=-16.378;QD=80.41;ReadPosRankSum=-2.580;VQSLOD=2.7067;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,160,9109	1/1:0,3:3:6.02:231,6,0	0/0:26,0:23:63.21:0,63,2711	0/0:31,0:30:84.29:0,84,4405	0/0:21,0:21:63.22:0,63,3738	0/0:26,0:26:78.27:0,78,4853	0/0:23,0:23:69.24:0,69,4094	1/1:6,24:30:72.22:2376,72,0	0/0:33,0:33:99:0,99,5874	0/0:30,0:30:87.30:0,87,4808	0/0:15,0:15:45.15:0,45,2655	0/0:27,0:27:81.28:0,81,4684	1/1:5,16:21:51.16:1802,51,0	1/1:2,16:18:51.09:1762,51,0	0/0:32,0:32:96.33:0,96,5681	0/0:33,0:33:99:0,99,5656	0/0:37,0:37:99:0,108,6354	0/0:26,0:26:78.27:0,78,4651	1/1:1,9:10:24.08:882,24,0	1/1:3,16:19:35.93:1096,36,0	1/1:2,15:17:21.07:793,21,0	1/1:5,20:25:56.96:1719,57,0	0/0:15,0:15:45.15:0,45,2584	0/0:28,0:28:84.27:0,84,4799	1/1:1,18:19:51.04:1676,51,0	0/0:33,0:33:99:0,99,5579	1/1:1,23:24:69.24:2617,69,0	0/0:16,0:16:48.16:0,48,2949
chr10	36427853	.	CAG	C	5672.51	PASS	AB=0.867;AC=21;AF=0.375;AN=56;BaseQRankSum=16.391;DP=598;FS=4.390;HRun=0;HaplotypeScore=121.0516;InbreedingCoeff=0.8944;MQ=71.66;MQ0=0;MQRankSum=-11.874;QD=28.36;ReadPosRankSum=-2.168;VQSLOD=5.6880;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,114,2083	1/1:0,8:8:18.06:253,18,0	0/1:11,0:13:59.62:60,0,234	0/0:12,0:13:4.82:0,5,217	0/0:18,0:18:42.12:0,42,710	0/0:17,0:16:39.11:0,39,683	0/0:26,0:26:78.25:0,78,1399	1/1:5,16:21:45.15:644,45,0	0/0:30,0:30:87.28:0,87,1562	0/0:18,0:18:48.16:0,48,880	0/0:6,0:6:12.04:0,12,220	0/0:22,0:22:63.22:0,63,1155	1/1:1,20:21:54.18:767,54,0	1/1:3,25:28:75.25:1068,75,0	0/0:36,0:36:99:0,102,1869	0/0:32,0:32:96.28:0,96,1653	0/0:46,0:46:99:0,129,2336	0/0:28,0:28:84.29:0,84,1535	1/1:0,9:9:27.09:386,27,0	1/1:1,13:14:18.06:258,18,0	1/1:3,12:16:15.03:205,15,0	1/1:1,21:22:39.06:552,39,0	0/0:8,0:8:18.06:0,18,318	0/0:30,0:30:84.27:0,84,1509	1/1:2,19:21:39.09:535,39,0	0/0:17,0:17:51.17:0,51,932	1/1:3,24:27:66.22:945,66,0	0/0:7,0:7:21.07:0,21,385
chr10	36428775	.	TG	T	6085.08	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=17.762;DP=548;FS=0.000;HRun=4;HaplotypeScore=96.0147;InbreedingCoeff=0.9934;MQ=74.42;MQ0=0;MQRankSum=-4.310;QD=31.05;ReadPosRankSum=-1.373;VQSLOD=4.0970;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,120,1645	1/1:0,7:7:21.06:252,21,0	0/0:15,0:15:23.23:0,23,263	0/0:9,0:9:24.08:0,24,324	0/0:15,0:15:42.13:0,42,571	0/0:9,0:9:27.08:0,27,362	0/0:20,0:20:57.19:0,57,798	1/1:0,22:22:63.18:744,63,0	0/0:21,0:21:60.20:0,60,838	0/0:17,0:17:45.14:0,45,616	0/0:5,0:5:12.04:0,12,167	0/0:27,0:27:75.24:0,75,1033	1/1:1,18:19:51.16:611,51,0	1/1:1,20:21:54.17:646,54,0	0/0:21,0:21:60.19:0,60,824	0/0:23,0:23:66.21:0,66,907	0/0:42,0:42:99:0,117,1598	0/0:25,0:25:72.22:0,72,989	1/1:1,13:14:39.08:450,39,0	1/1:0,14:14:30.04:343,30,0	1/1:0,43:43:99:1332,111,0	1/1:0,14:14:33.03:377,33,0	0/0:8,0:8:24.08:0,24,336	0/0:28,0:28:84.24:0,84,1119	1/1:0,25:25:69.21:827,69,0	0/0:17,0:17:48.16:0,48,672	1/1:0,17:17:42:503,42,0	0/0:9,0:9:27.09:0,27,371
chr10	36428985	.	A	AT	445.92	PASS	AB=0.829;AC=14;AF=0.250;AN=56;BaseQRankSum=8.549;DP=341;FS=4.280;HRun=0;HaplotypeScore=163.4550;InbreedingCoeff=0.6542;MQ=64.14;MQ0=0;MQRankSum=-3.641;QD=3.63;ReadPosRankSum=-2.984;VQSLOD=2.8201;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:69.22:0,69,947	0/1:6,1:7:1.67:34,0,2	0/0:7,0:7:18.04:0,18,234	0/0:7,0:7:20.96:0,21,261	0/0:11,0:11:33.11:0,33,461	0/0:15,0:15:45.14:0,45,601	0/0:9,0:9:27.09:0,27,378	0/0:5,0:5:3.13:0,3,7	0/0:14,0:14:39.13:0,39,545	0/0:18,0:18:51.15:0,51,675	0/0:7,0:7:15:0,15,187	0/0:10,0:10:30.08:0,30,383	0/1:10,8:18:4.76:86,0,5	1/1:14,4:18:19.87:140,20,0	0/0:5,0:5:15.05:0,15,208	0/0:7,0:7:21.06:0,21,276	0/0:22,0:22:57.19:0,57,794	0/0:17,0:17:45.15:0,45,629	1/1:5,2:7:2.80:34,3,0	0/1:6,3:9:0.78:31,0,1	0/1:8,0:8:1.63:75,0,2	1/1:15,4:19:9.60:80,10,0	0/0:7,0:7:21.07:0,21,293	0/0:6,0:6:18.06:0,18,252	1/1:18,3:21:9.12:58,9,0	0/0:10,0:10:30.09:0,30,401	1/1:10,6:16:2:72,2,0	0/0:15,0:15:40.38:0,40,549
chr10	36428987	.	T	TGATGATG	5138.51	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=12.375;DP=395;FS=21.814;HRun=0;HaplotypeScore=230.5086;InbreedingCoeff=0.9486;MQ=56.05;MQ0=0;MQRankSum=-8.566;QD=28.55;ReadPosRankSum=2.342;VQSLOD=3.2179;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:69.22:0,69,1833	1/1:10,0:11:14.40:252,14,0	0/0:7,0:6:15.05:0,15,381	0/0:5,0:5:14.64:0,15,309	0/0:11,0:11:33.11:0,33,895	0/0:19,0:19:45.14:0,45,1117	0/0:9,0:9:27.09:0,27,684	1/1:5,0:5:15.05:194,15,0	0/0:14,0:14:39.11:0,39,958	0/0:15,0:15:42.14:0,42,1092	0/0:7,0:7:15:0,15,324	0/0:9,0:9:27.07:0,27,637	1/1:20,8:28:51.13:1210,51,0	1/1:20,4:24:20.39:580,20,0	0/0:4,0:4:12.04:0,12,284	0/0:6,0:6:18.06:0,18,441	0/0:25,0:25:57.19:0,57,1443	0/0:18,0:18:45.15:0,45,1241	1/1:8,1:10:27.05:490,27,0	1/1:15,2:18:15.84:380,16,0	1/1:10,0:10:2.97:35,3,0	1/1:20,4:24:17.89:407,18,0	0/0:7,0:7:21.07:0,21,554	0/0:6,0:6:18.03:0,18,439	1/1:28,0:31:24.08:586,24,0	0/0:8,0:8:24.08:0,24,623	1/1:14,5:19:48.15:1004,48,0	0/0:17,0:17:40.38:0,40,938
chr10	36428999	.	AATTATTATT	A	3116.20	PASS	AB=0.667;AC=21;AF=0.457;AN=46;BaseQRankSum=-7.588;DP=370;FS=0.749;HRun=0;HaplotypeScore=221.3647;InbreedingCoeff=0.6215;MQ=44.17;MQ0=0;MQRankSum=-0.003;QD=20.10;ReadPosRankSum=-2.641;VQSLOD=2.6477;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,17:26:24:540,24,0	0/0:13,0:13:8.92:0,9,101	./.	0/0:2,0:2:2.90:0,3,16	0/0:4,0:9:2.87:0,3,18	1/1:5,15:20:27.01:623,27,0	./.	./.	1/1:7,0:13:9.03:188,9,0	1/1:5,10:15:30.05:574,30,0	1/1:4,3:7:5.93:100,6,0	1/1:5,4:9:12.04:333,12,0	0/0:29,0:29:33.79:0,34,541	0/0:24,0:24:15.05:0,15,274	./.	0/0:4,0:4:2.84:0,3,14	1/1:11,0:23:12.04:251,12,0	0/1:10,9:20:41.69:332,0,42	0/0:10,0:10:21.07:0,21,382	0/0:22,0:22:3.48:0,3,64	1/1:9,0:9:0.28:1,0,0	0/0:27,0:27:4.81:0,5,44	./.	1/1:2,0:2:3:27,3,0	0/0:32,0:32:8.06:0,8,70	0/0:6,0:6:2.97:0,3,20	0/0:20,0:20:32.90:0,33,474	1/1:4,0:11:15.05:312,15,0
chr10	36430747	.	TCTCTCCCTCC	T	1047.38	PASS	AB=1.000;AC=19;AF=0.352;AN=54;BaseQRankSum=-2.507;DP=440;FS=24.653;HRun=0;HaplotypeScore=99.6531;InbreedingCoeff=0.1130;MQ=31.82;MQ0=64;MQRankSum=-2.502;QD=3.91;ReadPosRankSum=3.185;VQSLOD=-0.4630;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:38,0:34:16.05:21,0,16	1/1:5,0:5:6.02:76,6,0	0/0:19,0:3:8.92:0,9,89	0/1:25,0:4:7.53:20,0,8	0/0:6,0:6:9.03:0,9,133	0/0:14,0:13:4.58:0,5,17	0/1:26,0:21:9.19:14,0,9	1/1:26,0:24:5.33:433,5,0	0/0:11,0:11:8.95:0,9,113	0/1:14,0:9:4.09:157,0,4	./.	0/1:16,0:15:0.20:23,0,0	1/1:13,0:10:1.05:44,1,0	0/0:15,0:12:2.75:0,3,20	0/0:13,0:12:5.26:0,5,16	0/0:8,0:7:11.84:0,12,120	0/0:16,0:15:31.88:0,32,355	0/1:16,0:13:75.26:141,0,75	0/1:17,0:14:9.84:154,0,10	1/1:15,0:12:4.50:69,4,0	1/1:21,0:14:0.03:4,0,0	0/0:11,0:10:3.38:0,3,11	0/0:10,6:13:1.25:0,1,3	0/1:27,0:25:7.28:7,0,14	0/0:11,0:8:2.11:0,2,5	0/0:13,0:9:12.79:0,13,144	0/1:8,0:6:27.14:31,0,27	0/0:9,0:5:12.02:0,12,171
chr10	36430751	.	TCCCTCC	T	1129.75	PASS	AB=1.000;AC=23;AF=0.426;AN=54;BaseQRankSum=-3.421;DP=415;FS=19.774;HRun=0;HaplotypeScore=80.1182;InbreedingCoeff=0.1741;MQ=30.30;MQ0=65;MQRankSum=-2.576;QD=4.15;ReadPosRankSum=3.109;VQSLOD=0.0346;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:35,0:31:4.24:4,0,15	1/1:6,0:6:8.99:96,9,0	0/0:21,0:3:8.92:0,9,89	0/1:27,0:4:7.53:20,0,8	0/0:6,0:6:9.03:0,9,128	0/1:12,0:11:1.04:1,0,1	0/1:16,0:11:13.44:13,0,50	1/1:24,0:22:36.45:473,36,0	0/0:11,0:11:10.66:0,11,184	1/1:8,4:7:5.93:169,6,0	./.	1/1:15,0:14:0.07:35,0,0	1/1:13,0:10:1.04:44,1,0	0/0:14,0:11:3.44:0,3,23	0/0:9,0:8:6.14:0,6,40	0/0:6,0:5:2.83:0,3,101	0/0:15,0:14:26.45:0,26,331	0/1:17,0:14:51.07:100,0,51	1/1:18,0:15:6.61:190,7,0	1/1:14,0:11:4.78:70,5,0	0/1:20,0:13:0.43:0,0,7	0/0:12,0:11:3.38:0,3,11	0/0:15,0:13:1.25:0,1,3	0/1:25,0:21:23.02:23,0,33	0/0:10,0:7:2.65:0,3,6	0/0:13,0:9:11.43:0,11,142	0/1:8,0:6:12.09:36,0,12	0/1:10,0:6:7.48:7,0,156
chr10	36430762	.	C	CCT	184.83	PASS	AB=0.946;AC=12;AF=0.222;AN=54;BaseQRankSum=0.407;DP=294;FS=0.000;HRun=0;HaplotypeScore=54.7782;InbreedingCoeff=0.0709;MQ=30.06;MQ0=50;MQRankSum=-1.519;QD=2.12;ReadPosRankSum=-0.458;VQSLOD=1.4500;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:7:5.86:0,6,37	1/1:3,0:3:8.82:86,9,0	0/0:25,0:3:9.03:0,9,132	0/0:32,0:4:9.01:0,9,90	0/0:8,0:8:15.03:0,15,196	0/0:7,0:7:5.78:0,6,35	0/0:12,0:8:3.74:0,4,12	0/0:14,0:12:26.93:0,27,369	0/1:9,0:9:17.89:18,0,202	0/1:7,0:4:15.15:15,0,53	./.	0/1:5,1:5:9:52,0,9	0/0:8,0:5:2.02:0,2,50	0/0:7,0:6:2.53:0,3,17	0/1:7,0:6:0.16:0,0,0	0/0:6,0:6:15.01:0,15,213	0/0:11,0:10:23.85:0,24,286	0/1:9,1:8:38.17:40,0,38	0/1:12,0:10:40.15:40,0,105	0/1:13,0:9:22.33:29,0,22	0/0:14,0:10:2.78:0,3,16	1/1:7,1:8:0.14:1,0,0	0/0:10,0:9:0.47:0,0,1	0/1:9,3:10:1.22:33,0,1	0/0:10,0:8:1.82:0,2,6	0/0:8,0:5:14.86:0,15,192	0/0:6,0:4:5.94:0,6,43	0/0:10,0:7:15.03:0,15,205
chr10	36431751	.	AC	A	1990.86	PASS	AB=0.917;AC=16;AF=0.286;AN=56;BaseQRankSum=1.295;DP=570;FS=2.545;HRun=10;HaplotypeScore=67.0738;InbreedingCoeff=0.4710;MQ=76.81;MQ0=1;MQRankSum=2.245;QD=8.33;ReadPosRankSum=4.493;VQSLOD=2.0765;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:75.05:0,75,747	0/0:8,0:8:15.03:0,15,158	0/1:21,0:16:9.47:9,0,130	0/1:18,1:16:17.25:17,0,36	1/1:3,19:22:56.93:482,57,0	0/0:16,1:17:7:0,7,285	0/1:23,1:24:17.37:17,0,484	0/0:28,0:27:33.03:0,33,342	1/1:6,16:22:6.33:261,6,0	0/1:31,0:30:3.32:3,0,484	0/1:14,0:14:1.72:2,0,201	0/0:7,0:19:11.63:0,12,66	0/0:14,0:15:35.95:0,36,368	0/0:17,1:18:7.03:0,7,296	0/0:24,0:24:27.82:0,28,513	1/1:4,19:23:32.85:286,33,0	1/1:2,12:14:26.99:234,27,0	0/0:19,0:19:47.10:0,47,488	0/0:15,0:15:6.37:0,6,251	0/0:12,0:12:21.01:0,21,210	0/0:23,0:23:0.57:0,1,377	0/0:11,0:17:8.89:0,9,69	0/0:6,0:11:14.46:0,14,82	0/0:3,0:15:14.81:0,15,75	0/0:18,0:18:37.79:0,38,361	1/1:7,26:33:83.89:718,84,0	0/0:25,1:26:30.97:0,31,568	0/1:5,11:16:1.42:135,0,1
chr10	36434391	.	A	ATGTG	34088.92	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-1.322;DP=960;FS=1.213;HRun=0;HaplotypeScore=256.9294;InbreedingCoeff=0.9781;MQ=42.00;MQ0=17;MQRankSum=5.553;QD=42.19;ReadPosRankSum=6.327;VQSLOD=4.4988;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,36:46:99:2601,105,0	1/1:2,14:16:26.29:711,26,0	0/0:75,0:27:68.03:0,68,1133	0/0:76,0:27:66.19:0,66,1138	1/1:1,23:24:29.77:766,30,0	1/1:2,14:16:33.11:862,33,0	1/1:12,34:45:78.01:1951,78,0	1/1:10,24:38:48.95:1561,49,0	1/1:4,27:31:57.19:1477,57,0	1/1:8,24:32:82.99:1747,83,0	1/1:3,13:16:18.06:476,18,0	1/1:6,29:34:60.21:1584,60,0	1/1:3,25:27:62.55:1603,63,0	1/1:8,30:37:55.82:1486,56,0	1/1:7,26:33:51.02:1326,51,0	1/1:10,17:27:39.10:937,39,0	1/1:18,12:30:28.35:960,28,0	1/1:5,24:31:66.23:1705,66,0	1/1:5,16:19:31.92:915,32,0	1/1:6,16:22:29.45:791,29,0	1/1:8,83:91:99:3139,120,0	1/1:4,32:36:57.07:1482,57,0	1/1:9,27:36:66.23:1702,66,0	1/1:3,34:38:36.12:941,36,0	1/1:4,23:27:45.12:1148,45,0	1/1:11,11:21:49.76:1022,50,0	1/1:0,17:19:36.12:943,36,0	1/1:1,5:6:11.97:255,12,0
chr10	36434411	.	ACGTGTGTGTGTG	A	2629.23	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-0.539;DP=827;FS=9.337;HRun=0;HaplotypeScore=381.3632;InbreedingCoeff=0.9400;MQ=39.91;MQ0=20;MQRankSum=-4.383;QD=21.03;ReadPosRankSum=-2.083;VQSLOD=0.4145;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:83.67:0,84,879	0/0:13,0:13:20.01:0,20,300	0/0:69,0:25:57.75:0,58,452	0/0:65,0:16:37.49:0,37,354	1/1:20,2:21:0.90:145,1,0	0/0:16,0:16:30.32:0,30,367	0/0:38,0:37:58.24:0,58,662	0/0:36,0:32:59.75:0,60,530	1/1:23,1:24:17.80:409,18,0	0/0:32,0:32:70.40:0,70,1124	0/0:13,0:13:17.63:0,18,127	0/0:30,0:29:50.05:0,50,520	0/0:23,0:22:36.95:0,37,305	0/0:35,0:35:50.33:0,50,356	0/0:28,0:28:29.01:0,29,332	1/1:22,4:26:30.64:600,31,0	1/1:26,0:26:14.28:676,14,0	0/0:26,0:26:58.98:0,59,503	0/0:15,0:14:38.34:0,38,329	0/0:17,0:17:23.79:0,24,258	0/0:72,0:71:99:0,101,1066	0/0:25,0:26:40.09:0,40,556	0/0:29,0:29:45.86:0,46,583	0/0:30,0:29:24.76:0,25,290	0/0:26,0:25:32.30:0,32,246	1/1:18,2:20:59.58:770,60,0	0/0:17,0:17:29.15:0,29,474	1/1:7,0:7:20.61:207,21,0
chr10	36434412	.	CGTGTGT	C	1134.43	PASS	AB=0.941;AC=28;AF=0.560;AN=50;BaseQRankSum=-1.706;DP=827;FS=0.000;HRun=0;HaplotypeScore=330.0326;InbreedingCoeff=-0.0468;MQ=39.96;MQ0=20;MQRankSum=1.872;QD=2.00;ReadPosRankSum=2.637;VQSLOD=1.5145;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:43,1:44:57.05:57,0,67	0/1:10,1:13:6.80:9,0,7	./.	./.	0/1:22,0:21:0.11:0,0,2	0/1:14,3:17:27.64:111,0,28	0/1:36,3:38:12.17:60,0,12	0/0:36,0:32:5.99:0,6,57	0/1:25,0:25:13.51:14,0,81	1/1:28,3:31:9.71:308,10,0	./.	0/1:29,0:29:15.97:27,0,16	1/1:21,0:20:3.46:63,3,0	1/1:35,1:35:4.14:103,4,0	0/0:28,1:29:3.19:0,3,44	1/1:26,0:26:7.18:90,7,0	0/0:27,0:27:13.92:0,14,73	0/1:25,0:26:31.34:71,0,31	0/0:16,0:15:5.81:0,6,41	1/1:14,1:16:4.80:109,5,0	0/1:73,0:72:9.23:9,0,9	1/1:23,1:26:2.79:76,3,0	0/1:23,3:26:1.93:14,0,2	1/1:31,0:30:2.11:33,2,0	0/1:24,0:26:1.80:18,0,2	0/1:20,0:20:23.18:23,0,90	1/1:17,1:18:5.38:83,5,0	0/0:7,0:7:8.56:0,9,36
chr10	36434960	.	GTGC	G	183.87	PASS	AB=0.974;AC=17;AF=0.327;AN=52;BaseQRankSum=-3.084;DP=247;FS=0.000;HRun=0;HaplotypeScore=139.9364;InbreedingCoeff=-0.2219;MQ=43.34;MQ0=0;MQRankSum=0.203;QD=1.23;ReadPosRankSum=-6.120;VQSLOD=0.2353;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:15,0:13:22.27:42,0,22	0/0:7,0:7:12.15:0,12,92	0/1:6,0:4:6.83:7,0,10	0/1:13,0:8:18.40:52,0,18	1/1:9,0:9:0.47:1,0,0	0/1:12,0:12:29.57:30,0,41	0/1:5,0:4:10.74:11,0,25	0/0:6,0:5:10.39:0,10,63	0/1:5,0:5:0.65:1,0,11	0/1:12,0:12:7.67:8,0,130	0/0:9,0:9:4.86:0,5,32	0/1:11,2:13:23.39:23,0,71	0/1:11,1:12:27.48:27,0,136	0/0:9,0:9:18.75:0,19,113	0/1:16,1:17:35.23:35,0,77	0/0:11,0:11:5.49:0,5,108	0/0:5,0:5:8.86:0,9,60	0/0:6,0:6:11.93:0,12,72	0/0:8,0:7:16.55:0,17,82	1/1:5,0:5:3.38:26,3,0	./.	0/0:7,0:7:4.36:0,4,35	0/0:6,0:6:3.88:0,4,22	0/1:5,0:5:5.47:5,0,12	0/1:9,0:9:5.80:6,0,59	0/1:11,0:11:37.42:48,0,37	0/0:21,1:21:26.62:0,27,284	./.
chr10	36434993	.	AGGGT	A	1132.64	PASS	AB=0.996;AC=35;AF=0.625;AN=56;BaseQRankSum=3.316;DP=403;FS=15.294;HRun=0;HaplotypeScore=139.4701;InbreedingCoeff=0.1055;MQ=56.73;MQ0=12;MQRankSum=-1.143;QD=3.60;ReadPosRankSum=0.952;VQSLOD=1.8863;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:13,0:9:0.30:18,0,0	1/1:11,0:10:2.38:50,2,0	0/0:49,0:14:23.24:0,23,178	0/1:58,0:15:7.59:8,0,88	1/1:18,0:18:0.47:2,0,0	0/1:8,0:8:6.73:14,0,7	0/1:16,0:16:6.18:42,0,6	1/1:13,0:12:5.12:44,5,0	0/0:8,0:8:6.23:0,6,23	0/1:14,0:13:21.46:21,0,144	0/1:11,0:11:4.02:19,0,4	0/1:20,0:20:44.16:127,0,44	1/1:12,0:12:16.98:121,17,0	1/1:11,0:11:12.93:90,13,0	1/1:11,0:11:12.11:104,12,0	1/1:13,0:12:3.95:44,4,0	1/1:9,0:9:2.29:30,2,0	1/1:5,0:5:12:133,12,0	1/1:6,5:10:4.46:134,4,0	0/1:12,0:12:7.93:30,0,8	0/0:10,0:8:0.53:0,1,2	1/1:13,0:13:9.47:47,9,0	0/0:4,0:4:0.77:0,1,3	1/1:11,0:10:2.60:11,3,0	0/0:12,0:10:2.91:0,3,7	0/0:5,0:5:7.50:0,8,28	0/1:16,0:15:52.23:170,0,52	1/1:6,0:6:3.55:22,4,0
chr10	36435089	.	C	CCCT	27967.74	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-0.277;DP=564;FS=1.423;HRun=0;HaplotypeScore=115.6033;InbreedingCoeff=0.9861;MQ=79.16;MQ0=0;MQRankSum=-9.850;QD=53.68;ReadPosRankSum=5.060;VQSLOD=7.1226;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,23:24:63.22:1373,63,0	1/1:2,6:8:24.08:506,24,0	0/0:22,0:22:48.14:0,48,712	0/0:21,0:20:57.13:0,57,801	1/1:4,17:22:54.14:1121,54,0	1/1:3,17:20:54.17:1137,54,0	1/1:2,16:18:48.16:1049,48,0	1/1:5,19:24:60.20:1254,60,0	1/1:6,16:22:48.16:1021,48,0	1/1:3,19:23:60.19:1270,60,0	1/1:3,12:15:30.06:609,30,0	1/1:4,27:31:81.28:1767,81,0	1/1:3,23:27:66.23:1424,66,0	1/1:5,13:19:39.13:849,39,0	1/1:1,20:21:54.19:1179,54,0	1/1:2,12:15:42.14:906,42,0	1/1:1,18:19:51.18:1114,51,0	1/1:2,11:13:36.12:787,36,0	1/1:6,9:15:30.09:607,30,0	1/1:3,19:23:54.18:1157,54,0	1/1:2,37:41:93.32:2023,93,0	1/1:2,13:15:39.13:835,39,0	1/1:0,7:8:18.06:380,18,0	1/1:4,27:33:84.72:1710,85,0	1/1:2,15:17:45.15:982,45,0	1/1:4,22:26:72.25:1537,72,0	1/1:0,15:17:48.16:1042,48,0	1/1:0,5:5:15.05:328,15,0
chr10	36436091	.	GTTATTA	G	1558.08	PASS	AB=0.800;AC=38;AF=0.905;AN=42;BaseQRankSum=0.691;DP=325;FS=4.890;HRun=0;HaplotypeScore=70.9360;InbreedingCoeff=-0.1676;MQ=52.44;MQ0=9;MQRankSum=0.409;QD=5.32;ReadPosRankSum=-1.086;VQSLOD=1.2786;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:6,9:14:2.94:18,3,0	./.	./.	./.	0/1:13,7:20:3.79:27,0,4	1/1:8,10:18:5.88:36,6,0	1/1:7,0:6:6:63,6,0	0/1:44,0:37:4.63:9,0,5	1/1:13,1:14:9:110,9,0	1/1:10,0:10:6.02:80,6,0	1/1:2,6:7:8.96:87,9,0	./.	1/1:2,0:4:3.01:48,3,0	./.	1/1:10,0:10:5.94:43,6,0	1/1:9,0:9:5.88:36,6,0	1/1:12,7:19:3.01:61,3,0	0/1:13,0:20:4:112,0,4	1/1:8,0:8:3.01:39,3,0	1/1:5,0:5:3.01:52,3,0	1/1:5,0:5:3.01:47,3,0	./.	./.	1/1:11,0:11:3.01:47,3,0	1/1:9,0:9:15.05:242,15,0	1/1:18,1:18:9.01:119,9,0	0/1:9,0:14:16.62:124,0,17	1/1:21,1:20:21.01:252,21,0
chr10	36436486	.	GT	G	4153.21	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=0.925;DP=322;FS=14.954;HRun=9;HaplotypeScore=135.2291;InbreedingCoeff=0.8966;MQ=39.59;MQ0=0;MQRankSum=-0.038;QD=17.75;ReadPosRankSum=1.689;VQSLOD=2.5849;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,6:8:11.93:100,12,0	1/1:1,6:7:9:82,9,0	0/0:9,0:6:9.91:0,10,99	0/0:8,0:6:9.03:0,9,104	0/0:19,0:19:39.07:0,39,425	1/1:2,10:12:21.01:189,21,0	1/1:2,7:9:20.93:181,21,0	1/1:6,16:22:47.88:411,48,0	0/0:9,0:9:21.06:0,21,239	1/1:1,16:16:45.01:406,45,0	1/1:1,11:12:32.93:288,33,0	1/1:2,12:14:36:323,36,0	1/1:2,4:6:11.92:99,12,0	1/1:2,7:9:18.01:162,18,0	1/1:3,8:11:12:109,12,0	0/0:11,0:11:30.06:0,30,330	0/0:9,0:9:11.99:0,12,122	1/1:3,5:8:15.82:129,16,0	1/1:13,11:22:26.99:245,27,0	1/1:2,15:17:41.94:367,42,0	1/1:3,8:11:20.91:176,21,0	1/1:0,9:9:20.88:179,21,0	1/1:0,13:13:24:216,24,0	1/1:0,2:2:3:27,3,0	1/1:1,9:10:24.01:217,24,0	0/0:19,1:21:20.57:0,21,465	1/1:4,9:13:27:246,27,0	0/0:2,0:2:6.02:0,6,69
chr10	36436560	.	G	GGTACA	5910.34	PASS	AC=48;AF=0.960;AN=50;BaseQRankSum=1.673;DP=151;FS=0.000;HRun=0;HaplotypeScore=218.2199;InbreedingCoeff=0.1477;MQ=40.52;MQ0=0;MQRankSum=-1.732;QD=39.93;ReadPosRankSum=1.703;VQSLOD=4.6949;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,1:3:3:29,3,0	1/1:6,0:6:15.05:283,15,0	1/1:1,0:1:3:26,3,0	0/0:1,0:1:0.47:0,0,1	1/1:11,3:14:17.92:246,18,0	1/1:7,1:8:24.08:376,24,0	1/1:5,0:5:13.60:253,14,0	1/1:8,0:8:11.94:167,12,0	1/1:7,1:8:24.08:410,24,0	1/1:7,0:7:21.01:326,21,0	1/1:7,0:7:18.05:279,18,0	1/1:2,0:2:6.02:105,6,0	1/1:1,0:1:3.01:66,3,0	1/1:2,1:3:9.03:133,9,0	1/1:5,1:6:18.06:307,18,0	1/1:5,0:5:15.05:300,15,0	1/1:4,0:4:6.02:143,6,0	1/1:3,0:3:9.03:130,9,0	1/1:1,0:1:3.01:77,3,0	1/1:13,1:14:33.11:526,33,0	./.	1/1:8,0:8:9.03:138,9,0	1/1:15,1:16:45.14:806,45,0	./.	1/1:1,2:3:6.02:77,6,0	1/1:6,0:6:12.04:246,12,0	1/1:9,0:9:24.08:462,24,0	./.
chr10	36436565	.	TTTTAA	T	45.72	PASS	AC=16;AF=0.889;AN=18;BaseQRankSum=2.003;DP=16;FS=7.404;HRun=0;HaplotypeScore=55.1136;MQ=93.07;MQ0=0;MQRankSum=-2.239;QD=4.16;ReadPosRankSum=2.003;VQSLOD=0.3303;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:0,1:1:2.37:8,2,0	./.	0/0:2,0:2:4.78:0,5,26	./.	1/1:0,3:3:2.97:10,3,0	1/1:0,1:1:2.88:15,3,0	./.	./.	1/1:0,1:1:2.90:16,3,0	./.	./.	./.	./.	1/1:0,1:1:2.74:12,3,0	1/1:0,1:1:2.90:16,3,0	./.	./.	./.	./.	1/1:0,1:1:2.84:14,3,0	./.	./.	./.	./.	1/1:0,2:2:5.84:34,6,0	./.	./.	./.
chr10	36436600	.	AG	A	1462.50	PASS	AB=1.000;AC=49;AF=0.942;AN=52;BaseQRankSum=-0.513;DP=150;FS=5.133;HRun=1;HaplotypeScore=120.1511;InbreedingCoeff=0.1324;MQ=49.92;MQ0=0;MQRankSum=-2.430;QD=9.95;ReadPosRankSum=1.830;VQSLOD=1.7012;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,5:5:11.49:50,11,0	1/1:0,4:4:11.18:51,11,0	0/1:3,0:3:13.34:13,0,33	0/0:1,0:1:0:0,0,0	1/1:0,14:14:17.24:81,17,0	1/1:0,7:7:13.75:61,14,0	1/1:0,3:3:8.04:33,8,0	1/1:0,3:3:8.83:55,9,0	1/1:0,2:2:5.49:23,5,0	1/1:0,8:8:16.95:103,17,0	1/1:0,9:9:20.61:79,21,0	1/1:0,8:8:21.91:97,22,0	1/1:0,3:3:7.95:32,8,0	1/1:0,6:6:13.16:54,13,0	1/1:0,7:7:18.55:75,19,0	1/1:0,6:6:16.47:70,16,0	1/1:0,1:1:2.68:11,3,0	1/1:0,2:2:5.83:33,6,0	1/1:0,2:1:2.98:22,3,0	1/1:0,13:13:35.46:152,35,0	./.	1/1:0,3:2:5.27:21,5,0	1/1:0,8:8:15.66:60,16,0	./.	1/1:0,7:7:19.27:83,19,0	1/1:0,8:8:23:118,23,0	1/1:0,10:10:25.29:127,25,0	1/1:0,5:5:8.67:47,9,0
chr10	36436603	.	T	TG	1641.49	PASS	AC=48;AF=0.923;AN=52;BaseQRankSum=-0.127;DP=150;FS=0.000;HRun=1;HaplotypeScore=119.5000;InbreedingCoeff=0.4105;MQ=49.92;MQ0=0;MQRankSum=-2.430;QD=11.40;ReadPosRankSum=2.079;VQSLOD=1.9849;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,5:5:12.14:56,12,0	1/1:0,4:4:11.35:56,11,0	0/0:3,0:3:5.80:0,6,42	0/0:1,0:1:0:0,0,0	1/1:1,13:14:19.74:77,20,0	1/1:0,7:7:14.15:69,14,0	1/1:0,3:3:8.29:37,8,0	1/1:0,3:3:8.87:58,9,0	1/1:0,2:2:5.60:26,6,0	1/1:0,8:8:14.64:102,15,0	1/1:0,9:9:21.68:111,22,0	1/1:0,8:8:22.30:104,22,0	1/1:0,3:3:8.07:34,8,0	1/1:0,6:6:13.91:82,14,0	1/1:0,7:7:19.31:105,19,0	1/1:0,6:6:16.79:79,17,0	1/1:0,1:1:2.74:12,3,0	1/1:0,2:2:5.88:36,6,0	1/1:0,2:1:2.99:23,3,0	1/1:0,13:13:36.19:167,36,0	./.	1/1:0,3:2:5.48:24,5,0	1/1:0,8:8:16.14:68,16,0	./.	1/1:0,7:7:19.67:93,20,0	1/1:0,8:8:23.22:128,23,0	1/1:0,10:10:25.73:140,26,0	1/1:0,5:5:8.76:51,9,0
chr10	36436705	.	C	CGCT	249.74	PASS	AB=1.000;AC=13;AF=0.929;AN=14;BaseQRankSum=-0.496;DP=21;FS=0.000;HRun=0;HaplotypeScore=53.4106;MQ=192.74;MQ0=0;MQRankSum=-1.240;QD=13.87;ReadPosRankSum=0.744;VQSLOD=3.1470;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,0:1:2.88:15,3,0	./.	1/1:2,4:5:8.20:92,8,0	0/1:6,0:6:1.80:109,0,2	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	1/1:1,0:1:3:28,3,0	1/1:2,0:2:6.01:57,6,0	1/1:1,0:1:2.94:18,3,0	./.	./.	./.	./.	1/1:1,0:1:0.47:1,0,0	./.	./.	./.
chr10	36436710	.	T	TTCCTC	441.22	PASS	AB=0.900;AC=12;AF=0.857;AN=14;BaseQRankSum=1.991;DP=20;FS=3.090;HRun=0;HaplotypeScore=51.3962;MQ=189.15;MQ0=0;MQRankSum=-1.855;QD=25.95;ReadPosRankSum=1.991;VQSLOD=2.9226;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,1:1:3.01:80,3,0	./.	0/1:3,0:4:3.54:37,0,4	0/1:7,0:7:5.85:6,0,40	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	1/1:0,1:1:3.01:92,3,0	1/1:0,2:2:6.02:190,6,0	1/1:0,1:1:3.01:78,3,0	./.	./.	./.	./.	1/1:0,1:1:3.01:35,3,0	./.	./.	./.
chr10	36436724	.	CGTTA	C	94.30	PASS	AC=8;AF=0.667;AN=12;BaseQRankSum=0.736;DP=11;FS=0.000;HRun=0;HaplotypeScore=40.0222;MQ=110.76;MQ0=0;MQRankSum=-0.736;QD=18.86;ReadPosRankSum=0.736;VQSLOD=2.9985;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,1:1:3:28,3,0	./.	./.	0/0:2,0:2:3.01:0,3,38	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	1/1:0,1:1:3.01:40,3,0	1/1:0,2:2:6.02:83,6,0	1/1:0,1:1:2.92:17,3,0	./.	./.	./.	./.	0/0:0,1:1:0:0,0,0	./.	./.	./.
chr10	36437522	.	C	CT	341.95	PASS	AB=0.933;AC=9;AF=0.161;AN=56;BaseQRankSum=4.159;DP=399;FS=1.006;HRun=1;HaplotypeScore=50.4029;InbreedingCoeff=0.4275;MQ=48.93;MQ0=31;MQRankSum=-1.305;QD=6.98;ReadPosRankSum=-2.506;VQSLOD=-0.2006;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:16:39.03:0,39,485	0/0:8,0:7:15.05:0,15,203	0/0:40,0:10:18.93:0,19,233	0/0:59,0:15:17.20:0,17,335	1/1:7,1:7:5.55:46,6,0	0/0:15,1:16:28.24:0,28,319	0/0:17,0:17:48.15:0,48,648	0/0:23,0:20:48.89:0,49,616	0/1:8,0:6:28.41:28,0,120	0/0:17,0:17:44.35:0,44,573	0/0:11,0:10:24.08:0,24,329	0/0:8,0:7:21.07:0,21,288	0/0:18,0:18:47.36:0,47,611	0/0:9,0:9:24.01:0,24,309	0/0:11,0:11:18.06:0,18,249	0/1:7,1:7:58.46:95,0,58	1/1:6,0:4:1.59:84,2,0	0/1:9,1:8:23.83:24,0,267	0/0:14,0:13:39.13:0,39,542	0/0:10,0:10:18.53:0,19,250	0/0:15,0:12:14.28:0,14,228	0/0:13,0:13:32.61:0,33,425	0/0:8,0:7:6.96:0,7,86	0/0:18,0:17:45.06:0,45,583	0/0:5,0:5:12.04:0,12,168	1/1:4,4:6:10.32:203,10,0	0/0:9,0:8:24.07:0,24,311	0/0:4,0:4:2.04:0,2,6
chr10	36438291	.	G	GAACAGCA	23383.66	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-14.818;DP=722;FS=8.762;HRun=0;HaplotypeScore=227.4118;InbreedingCoeff=0.9997;MQ=75.70;MQ0=0;MQRankSum=-19.767;QD=95.44;ReadPosRankSum=-3.394;VQSLOD=3.5802;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:60,0:60:99:0,169,4313	1/1:4,5:9:27.09:998,27,0	0/0:24,0:24:66.21:0,66,1531	0/0:22,0:22:60.18:0,60,1442	0/0:34,0:34:93.29:0,93,2279	0/0:23,0:22:66.23:0,66,1682	0/0:24,0:24:72.23:0,72,1800	1/1:18,14:34:96.32:3333,96,0	0/0:22,0:22:66.23:0,66,1679	0/0:32,0:32:93.32:0,93,2340	0/0:14,0:14:42.14:0,42,1090	0/0:28,0:28:81.26:0,81,1988	1/1:6,18:25:66.23:2570,66,0	1/1:6,18:27:63.22:2387,63,0	0/0:32,0:32:96.33:0,96,2421	0/0:24,0:24:72.25:0,72,1843	0/0:34,0:34:96.33:0,96,2462	0/0:30,0:30:51.48:0,51,2136	1/1:11,9:21:60.21:2068,60,0	1/1:9,26:36:99:3881,99,0	1/1:7,10:21:36.12:1343,36,0	1/1:11,20:32:81.28:3122,81,0	0/0:17,0:17:47.98:0,48,1246	0/0:18,0:18:54.17:0,54,1320	1/1:4,12:16:39.13:1550,39,0	0/0:29,0:29:81.27:0,81,2034	1/1:5,15:24:54.19:2132,54,0	0/0:10,0:10:27.09:0,27,701
chr10	36438516	.	GC	G	16833.93	PASS	AB=0.524;AC=37;AF=0.661;AN=56;BaseQRankSum=10.332;DP=666;FS=0.623;HRun=1;HaplotypeScore=73.2695;InbreedingCoeff=0.9153;MQ=87.11;MQ0=0;MQRankSum=-4.712;QD=38.09;ReadPosRankSum=2.558;VQSLOD=5.5043;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,108,1722	1/1:0,5:5:12.04:168,12,0	0/0:17,0:16:37.15:0,37,708	0/0:32,0:32:87.90:0,88,1372	1/1:0,14:14:27.07:378,27,0	0/0:17,0:17:51.17:0,51,813	0/0:29,0:29:87.30:0,87,1381	1/1:1,27:28:81.27:1132,81,0	1/1:0,30:30:87.29:1216,87,0	0/0:26,0:26:78.19:0,78,1197	0/0:16,0:16:42.13:0,42,648	1/1:0,34:34:99:1383,99,0	1/1:0,23:23:63.20:881,63,0	1/1:0,26:26:75.25:1043,75,0	0/0:19,0:19:54.16:0,54,816	1/1:0,31:31:87.29:1217,87,0	1/1:0,42:42:99:1636,117,0	0/0:31,0:31:90.31:0,90,1425	1/1:0,21:21:60.20:839,60,0	1/1:0,13:13:26.61:377,27,0	1/1:0,41:41:99:1678,120,0	1/1:0,18:18:48.16:670,48,0	1/1:0,13:13:30.10:419,30,0	1/1:0,36:36:96.31:1342,96,0	1/1:0,11:11:30.10:420,30,0	0/1:2,20:22:35.78:695,0,36	1/1:0,20:20:54.18:755,54,0	1/1:0,14:14:42.14:587,42,0
chr10	36438812	.	A	AAACCAGG	9625.74	PASS	AB=0.600;AC=11;AF=0.196;AN=56;BaseQRankSum=-9.572;DP=731;FS=3.076;HRun=0;HaplotypeScore=174.7631;InbreedingCoeff=0.9157;MQ=79.16;MQ0=0;MQRankSum=-13.700;QD=60.92;ReadPosRankSum=-1.102;VQSLOD=4.8688;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:50:99:0,120,2783	0/0:12,0:12:33.11:0,33,776	0/0:22,0:22:30.06:0,30,612	0/0:17,0:17:29.74:0,30,545	1/1:11,16:29:48.16:1630,48,0	0/0:19,0:19:48.16:0,48,1106	0/0:30,0:30:66.21:0,66,1506	0/0:25,0:25:42.14:0,42,897	1/1:17,13:31:48.16:1772,48,0	0/0:32,0:32:60.21:0,60,1399	0/0:20,0:20:51.13:0,51,1151	0/0:15,0:15:39.13:0,39,894	0/0:29,0:29:75.26:0,75,1742	0/0:24,0:24:57.20:0,57,1322	0/0:36,0:36:81.28:0,81,1883	1/1:12,13:27:45.15:1670,45,0	1/1:17,8:30:45.15:1555,45,0	0/0:24,0:24:63.22:0,63,1460	0/0:16,0:16:18.06:0,18,423	0/0:30,0:30:78.25:0,78,1723	0/0:31,0:31:66.23:0,66,1479	0/0:38,0:38:79.47:0,79,1717	0/0:23,0:23:48.16:0,48,1088	0/0:29,0:29:66.23:0,66,1485	0/0:24,0:24:60.21:0,60,1386	0/1:10,19:30:4.53:2010,0,5	0/0:26,0:25:66.23:0,66,1554	1/1:2,8:11:27.09:988,27,0
chr10	36440127	.	ATCTT	A	3495.19	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=5.257;DP=448;FS=13.069;HRun=0;HaplotypeScore=94.5730;InbreedingCoeff=0.9913;MQ=66.01;MQ0=1;MQRankSum=-5.905;QD=29.13;ReadPosRankSum=1.982;VQSLOD=2.8777;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:27:68.87:718,69,0	0/0:10,0:10:27.02:0,27,455	0/0:18,0:12:36.02:0,36,551	0/0:12,0:11:30.40:0,30,345	0/0:20,0:20:51.56:0,52,724	1/1:9,0:9:27.05:331,27,0	1/1:20,0:19:48.02:512,48,0	0/0:28,0:28:73.69:0,74,920	0/0:9,0:9:21.02:0,21,356	1/1:10,11:21:60.08:661,60,0	1/1:14,0:14:38.71:337,39,0	0/0:8,0:8:21.07:0,21,454	0/0:15,0:15:30.02:0,30,416	0/0:12,0:12:29.99:0,30,558	1/1:12,0:12:36.01:406,36,0	0/0:15,0:15:42.08:0,42,730	0/0:37,0:37:73.56:0,74,1478	1/1:17,0:17:50.94:531,51,0	0/0:13,0:13:38.32:0,38,667	0/0:18,0:18:54.08:0,54,978	0/0:7,0:7:12.03:0,12,229	0/0:16,0:16:43.91:0,44,744	0/0:19,0:18:39.01:0,39,749	0/0:17,0:17:35.49:0,35,637	0/0:11,0:11:21.04:0,21,408	0/0:12,0:12:36.11:0,36,712	0/0:15,0:15:40.37:0,40,909	0/0:16,0:16:33.11:0,33,667
chr10	36440128	.	TC	T	2554	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=6.052;DP=447;FS=18.344;HRun=1;HaplotypeScore=74.4430;InbreedingCoeff=0.9818;MQ=65.89;MQ0=3;MQRankSum=-6.398;QD=21.64;ReadPosRankSum=0.476;VQSLOD=2.4552;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,15:26:68.74:557,69,0	0/0:10,0:10:26.91:0,27,241	0/0:18,0:12:35.94:0,36,376	0/0:12,0:11:27.25:0,27,193	0/0:19,0:19:45.80:0,46,373	1/1:2,7:9:26.99:236,27,0	1/1:11,8:18:47.96:417,48,0	0/0:28,0:28:64.21:0,64,601	0/0:9,0:9:16.43:0,16,149	1/1:11,10:21:59.99:525,60,0	1/1:1,13:14:38.67:283,39,0	0/0:9,0:8:10.07:0,10,168	0/0:15,0:15:27.76:0,28,225	0/0:12,0:12:26.09:0,26,281	1/1:4,8:12:35.96:310,36,0	0/0:15,0:15:41.92:0,42,354	0/0:37,0:37:71.74:0,72,571	1/1:9,8:17:50.89:425,51,0	0/0:13,0:13:38.20:0,38,332	0/0:18,0:18:53.94:0,54,493	0/0:7,0:7:11.97:0,12,103	0/0:16,0:16:40.79:0,41,335	0/0:19,0:18:38.43:0,38,323	0/0:18,0:17:35.07:0,35,264	0/0:11,0:11:20.99:0,21,197	0/0:12,0:12:35.17:0,35,296	0/0:15,0:15:38.31:0,38,392	0/0:16,0:16:29:0,29,208
chr10	36440129	.	C	CTT	2336.57	PASS	AB=0.662;AC=36;AF=0.643;AN=56;BaseQRankSum=-3.376;DP=519;FS=1.153;HRun=14;HaplotypeScore=126.1028;InbreedingCoeff=0.7518;MQ=61.01;MQ0=4;MQRankSum=3.825;QD=6.37;ReadPosRankSum=-4.633;VQSLOD=-0.2542;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:29.03:0,29,123	1/1:9,0:10:3:29,3,0	0/0:16,0:11:8.49:0,8,60	0/0:11,0:11:3.81:0,4,38	1/1:12,0:22:18.39:115,18,0	0/0:9,0:9:18.71:0,19,79	0/0:19,0:18:3.23:0,3,69	1/1:28,0:30:15.98:125,16,0	0/1:7,0:11:16.80:17,0,26	0/0:22,0:22:26.50:0,26,112	0/0:14,0:14:10.64:0,11,46	1/1:13,4:16:23.84:199,24,0	1/1:12,5:19:11.94:101,12,0	1/1:17,0:19:18.97:119,19,0	0/0:12,0:12:18.65:0,19,79	1/1:8,0:16:16.60:59,17,0	1/1:8,0:38:23.90:136,24,0	0/0:20,0:20:26.29:0,26,109	1/1:11,0:14:15.02:151,15,0	1/1:25,1:28:32.57:267,33,0	1/1:6,1:8:8.98:88,9,0	1/1:14,0:20:24.80:211,25,0	1/1:15,0:21:14.89:124,15,0	1/1:10,1:19:23.89:222,24,0	1/1:11,0:17:17.88:137,18,0	0/1:4,1:13:1.01:99,0,1	1/1:19,2:22:27.62:213,28,0	1/1:3,1:19:9.90:123,10,0
chr10	36440140	.	TTTTC	T	2142.92	PASS	AB=1.000;AC=20;AF=0.357;AN=56;BaseQRankSum=7.268;DP=472;FS=0.440;HRun=0;HaplotypeScore=111.0038;InbreedingCoeff=0.5362;MQ=49.54;MQ0=4;MQRankSum=-7.041;QD=10.06;ReadPosRankSum=1.654;VQSLOD=2.4335;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,16:22:1.88:423,2,0	0/0:8,0:7:15.05:0,15,240	0/0:12,0:6:18.05:0,18,265	0/0:8,0:7:15.40:0,15,144	0/0:21,0:21:44.78:0,45,592	1/1:1,7:8:23.86:276,24,0	1/1:8,7:14:21.41:313,21,0	0/1:19,0:19:14.76:15,0,419	0/0:12,0:12:30.02:0,30,502	1/1:10,9:19:24.57:388,25,0	1/1:4,7:11:16.36:185,16,0	0/1:21,0:20:8.24:8,0,448	0/0:14,0:14:21.01:0,21,274	0/1:19,0:19:0.22:0,0,481	1/1:5,8:13:32.87:341,33,0	0/0:12,0:12:33.10:0,33,658	0/0:42,0:42:85.47:0,85,1585	1/1:7,8:15:28.73:348,29,0	0/0:11,0:11:29.79:0,30,397	0/0:26,0:26:36.36:0,36,725	0/1:9,0:9:11.42:11,0,136	0/0:18,0:18:10.26:0,10,469	0/1:21,0:20:1.23:1,0,500	0/1:21,0:19:22.68:23,0,306	0/0:16,0:16:2.60:0,3,284	0/0:15,0:15:25.18:0,25,697	0/0:23,0:23:22.42:0,22,745	0/0:21,0:21:48.11:0,48,930
chr10	36442131	.	C	CT	8204.99	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-11.572;DP=707;FS=6.465;HRun=1;HaplotypeScore=66.8678;InbreedingCoeff=0.9978;MQ=83.36;MQ0=0;MQRankSum=-6.882;QD=41.23;ReadPosRankSum=4.421;VQSLOD=5.2798;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,47:47:99:1881,126,0	0/0:14,0:14:42.14:0,42,544	0/0:23,0:23:68.93:0,69,830	0/0:22,0:22:60.19:0,60,758	0/0:29,0:29:84.25:0,84,1063	1/1:1,25:26:65.81:989,66,0	1/1:0,24:24:69.23:1034,69,0	0/0:23,0:23:69.20:0,69,859	0/0:24,0:24:69.22:0,69,896	1/1:0,31:31:93.30:1373,93,0	1/1:0,24:24:72.24:1079,72,0	0/0:22,0:22:66.20:0,66,842	0/0:35,0:35:99:0,102,1295	0/0:18,0:18:54.18:0,54,701	1/1:1,25:26:36.30:1039,36,0	0/0:31,0:31:90.26:0,90,1138	0/0:27,0:27:81.21:0,81,1006	1/1:0,20:20:54.18:809,54,0	0/0:30,0:30:87.28:0,87,1130	0/0:30,0:30:90.28:0,90,1154	0/0:28,0:28:84.21:0,84,1055	0/0:33,0:33:99:0,99,1226	0/0:19,0:19:57.19:0,57,740	0/0:19,0:19:57.15:0,57,722	0/0:17,0:17:51.17:0,51,662	0/0:20,1:21:18.22:0,18,734	0/0:36,0:36:99:0,105,1319	0/0:7,0:7:21.07:0,21,273
chr10	36443157	.	T	TAAA	5652.26	PASS	AB=0.643;AC=37;AF=0.661;AN=56;BaseQRankSum=-10.526;DP=484;FS=1.013;HRun=12;HaplotypeScore=87.0312;InbreedingCoeff=0.5898;MQ=65.25;MQ0=1;MQRankSum=-1.295;QD=16.82;ReadPosRankSum=-3.331;VQSLOD=2.9139;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:3,0:35:22.99:23,0,45	1/1:1,2:4:6.49:99,6,0	0/0:17,0:8:11.92:0,12,120	0/1:12,0:9:3.66:4,0,43	0/0:5,0:26:58.78:0,59,357	1/1:0,0:13:18.44:73,18,0	1/1:4,0:8:6.73:31,7,0	1/1:13,16:35:75.08:1031,75,0	0/0:4,0:24:46.44:0,46,274	0/1:4,0:20:8.76:71,0,9	1/1:1,0:6:7.97:34,8,0	1/1:4,13:18:22.63:377,23,0	1/1:4,16:21:33.11:602,33,0	1/1:4,9:14:18.04:285,18,0	0/1:5,0:17:9.57:10,0,49	0/0:3,0:19:38.21:0,38,231	0/0:5,0:31:70.54:0,71,426	0/1:5,0:28:21.36:21,0,39	1/1:6,12:20:18.44:671,18,0	1/1:3,11:18:42.06:641,42,0	1/1:0,3:6:9.01:133,9,0	1/1:2,7:9:18.06:312,18,0	1/1:4,6:10:18.06:308,18,0	1/1:0,8:8:18.06:330,18,0	1/1:3,5:12:15:171,15,0	0/0:7,0:19:33.72:0,34,210	1/1:6,12:22:31.28:426,31,0	0/0:2,0:10:23.52:0,24,142
chr10	36443422	.	GAGAA	G	480.28	PASS	AB=0.946;AC=22;AF=0.440;AN=50;BaseQRankSum=4.112;DP=212;FS=0.000;HRun=0;HaplotypeScore=63.5105;InbreedingCoeff=0.1315;MQ=37.27;MQ0=14;MQRankSum=-1.640;QD=4.14;ReadPosRankSum=1.717;VQSLOD=0.8283;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:20.36:0,20,239	1/1:2,0:2:2.87:25,3,0	0/0:15,0:3:2.87:0,3,81	0/1:29,0:3:5.20:5,0,81	0/0:3,2:5:6.02:0,6,103	0/0:6,1:6:11.45:0,11,100	0/1:12,2:12:66.29:66,0,201	0/0:14,0:13:25.54:0,26,171	1/1:4,2:5:8.99:128,9,0	0/1:11,1:11:25.59:26,0,375	0/0:4,1:5:3.84:0,4,34	./.	1/1:7,0:6:5.47:53,5,0	1/1:3,0:3:5.91:38,6,0	0/1:7,3:10:99:131,0,183	0/1:4,0:4:42.91:43,0,68	0/0:6,0:6:15:0,15,208	1/1:4,0:2:1.25:3,1,0	0/0:2,0:2:5.96:0,6,43	1/1:4,0:4:0.34:30,0,0	0/0:11,0:9:12.14:0,12,57	./.	0/1:6,0:4:2.41:12,0,2	./.	0/1:5,0:5:2.73:12,0,3	0/0:4,1:3:3.01:0,3,60	0/1:9,0:7:43.21:53,0,43	1/1:1,0:1:0.47:1,0,0
chr10	36443473	.	AGC	A	1632.92	PASS	AB=0.950;AC=22;AF=0.393;AN=56;BaseQRankSum=0.178;DP=282;FS=29.086;HRun=0;HaplotypeScore=62.1027;InbreedingCoeff=0.6824;MQ=47.82;MQ0=6;MQRankSum=1.967;QD=13.96;ReadPosRankSum=-1.459;VQSLOD=1.5334;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:19:14.85:0,15,133	0/1:6,0:6:8.88:57,0,9	0/0:8,0:6:17.96:0,18,147	0/0:19,0:11:24.40:0,24,160	0/0:9,0:9:26.96:0,27,222	0/0:10,0:9:14.97:0,15,134	0/0:11,0:10:8.99:0,9,76	1/1:22,0:22:56.78:466,57,0	0/0:9,0:9:26.25:0,26,167	0/0:12,0:11:26.99:0,27,247	0/0:7,0:7:5.85:0,6,38	1/1:5,0:5:12.88:105,13,0	0/1:3,1:4:2.06:56,0,2	1/1:9,0:9:3.11:81,3,0	0/0:12,0:12:20.82:0,21,182	0/0:6,0:5:3.01:0,3,94	0/0:12,0:12:31.06:0,31,227	0/0:9,0:7:17.92:0,18,158	1/1:2,6:6:17.95:150,18,0	1/1:7,0:7:20.93:169,21,0	1/1:11,1:12:17.98:151,18,0	1/1:10,0:10:9.91:163,10,0	1/1:8,0:8:13.36:101,13,0	0/1:6,0:5:7.97:40,0,8	0/1:12,0:12:1.91:148,0,2	0/0:7,0:7:19.55:0,20,131	1/1:7,1:7:17.92:146,18,0	0/0:14,0:14:40.56:0,41,301
chr10	36445150	.	T	TAA	2940.18	PASS	AB=0.556;AC=11;AF=0.196;AN=56;BaseQRankSum=-8.342;DP=618;FS=7.887;HRun=0;HaplotypeScore=128.5839;InbreedingCoeff=0.8964;MQ=73.60;MQ0=3;MQRankSum=-0.578;QD=27.74;ReadPosRankSum=-0.856;VQSLOD=4.9143;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:32:63.97:0,64,528	0/0:11,0:11:30.65:0,31,192	0/0:39,0:25:69.13:0,69,937	0/0:19,0:11:20.48:0,20,218	1/1:3,12:17:32.58:419,33,0	0/0:28,0:28:31.24:0,31,451	0/0:15,0:15:40.66:0,41,290	0/0:35,0:35:38.82:0,39,475	1/1:0,14:17:27.09:380,27,0	0/0:28,0:28:22.38:0,22,396	0/0:26,0:26:71.32:0,71,474	0/0:18,0:18:42.17:0,42,307	0/0:19,0:19:11.76:0,12,285	0/0:17,0:17:40.14:0,40,263	0/0:28,0:28:73.75:0,74,481	1/1:0,15:17:45.04:640,45,0	1/1:2,13:17:34.70:452,35,0	0/0:14,0:14:11.77:0,12,188	0/0:21,0:21:47.54:0,48,311	0/0:30,0:30:47.13:0,47,438	0/0:16,0:16:40.27:0,40,250	0/0:18,0:18:46.73:0,47,317	0/0:23,0:23:38.39:0,38,371	0/0:14,0:14:35.95:0,36,236	0/0:23,0:23:65.95:0,66,444	1/1:7,25:33:34.73:1068,35,0	0/0:38,0:38:98.58:0,99,658	0/1:1,4:5:5.81:161,0,6
chr10	36446086	.	GA	G	9901.14	PASS	AB=0.571;AC=39;AF=0.696;AN=56;BaseQRankSum=9.662;DP=658;FS=0.000;HRun=10;HaplotypeScore=67.0286;InbreedingCoeff=0.9176;MQ=65.95;MQ0=4;MQRankSum=-0.959;QD=21.38;ReadPosRankSum=3.360;VQSLOD=5.6967;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,39:46:99:1016,117,0	1/1:0,12:12:32.99:286,33,0	0/0:23,0:11:25.82:0,26,234	0/0:25,0:13:30.53:0,31,284	0/0:31,0:31:69.17:0,69,753	1/1:3,22:25:62.97:547,63,0	1/1:2,29:31:77.98:677,78,0	1/1:6,30:36:86.92:747,87,0	0/0:16,0:16:45.06:0,45,474	1/1:4,17:21:50.99:443,51,0	1/1:1,20:21:53.98:469,54,0	0/1:4,12:16:12.96:248,0,13	1/1:1,15:16:41.98:365,42,0	1/1:2,23:25:59.98:521,60,0	1/1:2,20:22:56.99:495,57,0	0/0:20,0:21:59.96:0,60,632	0/0:48,0:48:99:0,138,1487	1/1:4,25:29:68.97:599,69,0	1/1:5,23:28:68.89:581,69,0	1/1:5,13:18:38.98:339,39,0	1/1:1,17:18:44.99:391,45,0	1/1:2,17:19:47.97:415,48,0	1/1:3,16:19:29.74:418,30,0	1/1:1,17:18:50.99:443,51,0	1/1:4,26:30:68.93:592,69,0	0/0:23,1:24:37.11:0,37,638	1/1:1,12:13:35.99:312,36,0	0/0:7,0:7:18.02:0,18,180
chr10	36446382	.	A	AG	11456.31	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=17.108;DP=697;FS=3.284;HRun=1;HaplotypeScore=91.2806;InbreedingCoeff=0.9998;MQ=88.36;MQ0=0;MQRankSum=-2.970;QD=37.44;ReadPosRankSum=1.669;VQSLOD=5.3240;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,129,1640	1/1:0,12:12:26.95:389,27,0	0/0:30,0:30:83.90:0,84,1020	0/0:28,0:28:60.34:0,60,926	0/0:30,0:30:87.26:0,87,1101	0/0:25,0:25:75.23:0,75,958	0/0:21,0:21:62.23:0,62,784	1/1:3,25:28:75.20:1006,75,0	0/0:21,0:21:60.19:0,60,778	0/0:30,0:30:81.26:0,81,1033	0/0:18,0:18:51.16:0,51,651	1/1:0,19:19:54.18:783,54,0	1/1:1,31:32:87.29:1260,87,0	1/1:1,21:22:60.20:867,60,0	0/0:25,0:24:69.22:0,69,883	0/0:18,0:18:45.14:0,45,570	0/0:26,0:26:75.20:0,75,939	0/0:24,0:24:69.22:0,69,896	1/1:4,12:16:30.90:596,31,0	1/1:1,18:19:51.17:736,51,0	1/1:0,28:28:66.22:951,66,0	1/1:1,25:26:69.23:998,69,0	1/1:0,14:14:42.14:608,42,0	1/1:0,36:36:96.32:1392,96,0	1/1:3,27:30:72.24:1045,72,0	0/0:28,0:28:84.27:0,84,1091	1/1:1,23:24:57.19:826,57,0	0/0:21,0:21:57.18:0,57,739
chr10	36446684	.	C	CTA	9641.82	PASS	AB=0.743;AC=25;AF=0.446;AN=56;BaseQRankSum=-16.112;DP=623;FS=2.856;HRun=0;HaplotypeScore=70.4569;InbreedingCoeff=0.8303;MQ=75.83;MQ0=3;MQRankSum=0.087;QD=34.31;ReadPosRankSum=2.233;VQSLOD=6.6759;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:72.23:0,72,925	1/1:1,4:5:12.04:203,12,0	0/1:15,0:15:2.60:3,0,223	0/0:20,0:20:24.07:0,24,296	0/0:26,0:26:72.23:0,72,927	0/0:29,0:29:78.25:0,78,1004	0/0:26,0:26:57.17:0,57,718	1/1:7,18:26:58.43:928,58,0	0/0:29,0:29:69.22:0,69,877	0/0:35,0:35:99:0,102,1284	0/0:31,0:31:75.21:0,75,926	1/1:2,13:15:33.11:557,33,0	1/1:5,13:18:36.12:607,36,0	1/1:3,16:19:42.14:708,42,0	0/0:15,0:15:30.10:0,30,386	0/0:21,0:21:51.16:0,51,656	0/0:23,0:23:63.16:0,63,792	0/0:14,0:14:36.12:0,36,462	0/1:10,11:21:2.50:521,0,2	1/1:5,18:22:45.15:758,45,0	1/1:2,15:16:42.14:709,42,0	1/1:2,26:28:69.24:1162,69,0	1/1:5,14:18:39.13:654,39,0	0/1:5,15:20:26.06:708,0,26	1/1:6,25:31:69.24:1164,69,0	0/0:29,0:29:72.22:0,72,914	1/1:2,22:24:57.20:961,57,0	0/0:16,0:16:36.12:0,36,463
chr10	36447062	.	G	GA	5462.18	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=-15.118;DP=567;FS=0.000;HRun=7;HaplotypeScore=53.5174;InbreedingCoeff=0.9072;MQ=71.53;MQ0=0;MQRankSum=-0.648;QD=31.76;ReadPosRankSum=1.449;VQSLOD=4.7748;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,34:34:99:1196,99,0	0/0:4,0:4:6:0,6,58	0/0:9,0:9:21.03:0,21,198	0/1:6,0:6:5.96:6,0,105	0/0:27,0:27:75.09:0,75,713	1/1:0,24:24:72.22:870,72,0	1/1:0,18:18:48.15:580,48,0	0/0:36,0:36:93.10:0,93,880	0/0:9,0:9:21.03:0,21,203	1/1:3,20:23:60.18:725,60,0	1/1:3,14:17:33.06:382,33,0	0/0:13,0:13:36.06:0,36,347	0/0:15,0:15:39.06:0,39,377	0/0:11,0:11:24.04:0,24,232	1/1:1,31:32:90.28:1087,90,0	0/0:19,0:19:54.09:0,54,522	0/0:27,0:27:72.06:0,72,680	1/1:1,17:18:51.16:616,51,0	0/0:19,0:19:54.08:0,54,517	0/0:33,0:33:93.13:0,93,892	0/0:20,0:20:57.09:0,57,550	0/0:13,0:14:41.10:0,41,382	0/0:21,0:21:57.09:0,57,550	0/0:15,0:15:42.07:0,42,406	0/0:35,0:34:99:0,102,985	0/0:29,0:29:84.13:0,84,811	0/0:28,0:27:60.09:0,60,579	0/0:11,0:11:33.05:0,33,319
chr10	36447226	.	G	GA	5909.26	PASS	AB=0.800;AC=26;AF=0.464;AN=56;BaseQRankSum=13.064;DP=594;FS=8.770;HRun=9;HaplotypeScore=76.6267;InbreedingCoeff=0.8517;MQ=76.44;MQ0=0;MQRankSum=-1.322;QD=21.73;ReadPosRankSum=-2.075;VQSLOD=4.4833;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,123,1068	1/1:0,6:6:18.05:199,18,0	0/0:27,0:27:30.32:0,30,438	0/1:14,0:14:9.28:9,0,177	0/0:31,0:31:83.96:0,84,725	0/0:20,0:20:53.98:0,54,469	0/0:15,0:15:32.99:0,33,286	1/1:6,19:26:33.92:575,34,0	0/0:9,0:9:23.99:0,24,208	0/0:23,0:23:56.96:0,57,490	0/0:30,0:30:74.92:0,75,644	1/1:3,9:12:10.41:249,10,0	1/1:3,17:20:13.05:372,13,0	1/1:3,16:19:42.11:465,42,0	0/0:28,0:28:65.93:0,66,569	0/0:26,0:26:68.97:0,69,598	0/0:27,0:28:74.02:0,74,631	0/0:11,0:11:23.98:0,24,208	0/1:4,8:12:22.03:235,0,22	1/1:12,13:25:35.99:360,36,0	1/1:5,23:28:54.62:598,55,0	1/1:2,16:18:25:478,25,0	1/1:4,13:17:42.08:452,42,0	1/1:4,13:18:44.91:465,45,0	1/1:3,19:23:53.98:578,54,0	0/0:22,0:22:59.98:0,60,519	1/1:5,29:34:80.89:873,81,0	0/0:7,0:7:17.99:0,18,156
chr10	36449945	.	CA	C	12073.79	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-2.646;DP=527;FS=27.274;HRun=8;HaplotypeScore=58.7310;InbreedingCoeff=0.8692;MQ=70.03;MQ0=4;MQRankSum=-6.394;QD=24.39;ReadPosRankSum=4.329;VQSLOD=3.3172;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,28:30:75.12:724,75,0	1/1:2,4:6:12.02:116,12,0	0/0:18,0:12:3.65:0,4,259	0/0:14,0:10:27.50:0,27,294	1/1:5,12:17:27.02:259,27,0	1/1:0,22:22:63.10:608,63,0	1/1:3,21:24:51.07:492,51,0	1/1:1,24:25:69.11:666,69,0	1/1:0,18:18:48.08:463,48,0	1/1:0,29:29:84.14:811,84,0	1/1:2,4:6:12.02:116,12,0	1/1:3,13:16:36.06:348,36,0	1/1:2,23:25:66.11:637,66,0	1/1:3,16:19:39.06:377,39,0	1/1:2,27:29:69.11:666,69,0	1/1:3,15:18:45.07:435,45,0	1/1:0,27:27:75.12:724,75,0	1/1:0,12:12:33.05:319,33,0	1/1:2,14:16:42.05:400,42,0	1/1:0,14:15:38.09:352,38,0	1/1:1,24:25:72.11:695,72,0	1/1:1,13:14:39.06:374,39,0	1/1:0,6:6:15.02:145,15,0	1/1:2,20:22:60.09:579,60,0	1/1:1,7:8:18.03:174,18,0	1/1:2,18:20:54.09:521,54,0	1/1:4,26:30:72.11:695,72,0	1/1:3,13:16:39.06:377,39,0
chr10	36450179	.	T	TTGTGTG	2890.25	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=-1.606;DP=686;FS=2.954;HRun=0;HaplotypeScore=231.4096;InbreedingCoeff=0.5511;MQ=65.08;MQ0=7;MQRankSum=1.069;QD=10.00;ReadPosRankSum=0.704;VQSLOD=2.8791;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:45,0:46:58.80:519,59,0	0/0:14,0:14:14.13:0,14,91	0/0:40,0:25:10.56:0,11,144	0/1:37,0:27:27.81:28,0,86	0/0:27,0:27:21.06:0,21,151	1/1:26,3:31:34.37:389,34,0	1/1:32,0:31:30.73:315,31,0	0/0:26,0:27:6.66:0,7,136	0/0:24,0:24:5.65:0,6,177	1/1:32,1:33:55.49:821,55,0	1/1:14,1:15:7.64:139,8,0	0/1:26,0:28:13.69:14,0,60	0/0:16,0:16:4.47:0,4,92	0/1:21,0:21:6.58:7,0,54	1/1:12,7:20:5.69:44,6,0	0/0:20,0:21:23.87:0,24,191	0/0:16,0:16:4.53:0,5,112	1/1:21,2:25:46.68:801,47,0	0/0:20,0:18:0.54:0,1,101	0/0:16,0:16:5.95:0,6,43	0/0:38,0:36:5.62:0,6,44	0/0:25,0:26:26.18:0,26,188	0/0:16,0:16:11.73:0,12,72	0/0:19,0:19:11.77:0,12,81	0/0:19,0:20:10.15:0,10,67	0/0:31,0:31:32.71:0,33,394	0/0:11,0:11:2.94:0,3,18	0/0:15,0:15:22.89:0,23,217
chr10	36450198	.	TGC	T	859.71	PASS	AB=0.979;AC=17;AF=0.304;AN=56;BaseQRankSum=2.063;DP=619;FS=4.585;HRun=0;HaplotypeScore=188.8041;InbreedingCoeff=-0.3640;MQ=46.45;MQ0=13;MQRankSum=-1.351;QD=2.28;ReadPosRankSum=0.620;VQSLOD=2.2936;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:36,4:40:99:130,0,243	0/0:11,0:11:14.48:0,14,92	0/0:28,0:11:11.01:0,11,285	0/1:38,0:17:25.71:26,0,143	0/0:24,1:25:0.62:0,1,218	0/1:31,2:32:99:108,0,244	0/0:33,0:29:3.02:0,3,206	0/1:28,0:28:3.68:4,0,234	0/1:25,0:25:66.77:67,0,285	0/1:34,1:34:53.46:53,0,506	0/1:13,0:13:43.51:44,0,132	0/1:15,1:16:39.22:39,0,68	0/0:12,0:12:9.25:0,9,115	0/0:17,0:17:12.61:0,13,83	1/1:10,2:12:6.02:90,6,0	0/1:21,0:21:84.05:84,0,127	0/1:15,0:15:44.02:44,0,113	0/1:23,2:25:35.59:36,0,432	0/1:25,0:18:15.91:16,0,177	0/0:9,0:9:6:0,6,52	0/0:39,0:34:5.96:0,6,44	0/0:25,0:25:13.90:0,14,178	0/1:9,0:9:12.07:12,0,30	0/0:17,0:17:9.28:0,9,75	0/0:17,0:17:7.21:0,7,95	0/1:25,0:25:99:150,0,381	0/0:7,0:7:2.94:0,3,18	0/1:17,0:16:99:109,0,184
chr10	36450202	.	T	TGC	1048.96	PASS	AB=0.729;AC=19;AF=0.352;AN=54;BaseQRankSum=-0.619;DP=577;FS=15.500;HRun=0;HaplotypeScore=191.2257;InbreedingCoeff=0.5767;MQ=43.13;MQ0=14;MQRankSum=-0.993;QD=5.22;ReadPosRankSum=0.008;VQSLOD=1.9551;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:40.28:0,40,688	1/1:7,1:8:5.67:35,6,0	0/0:25,0:6:14.84:0,15,193	0/0:33,0:12:21.38:0,21,212	0/0:23,0:23:24.06:0,24,302	0/0:34,0:33:50.79:0,51,594	0/0:34,0:30:43.38:0,43,578	0/1:11,11:22:99:323,0,221	0/0:25,0:25:22.13:0,22,428	0/0:35,0:34:84.23:0,84,1142	0/0:11,0:11:20.99:0,21,277	1/1:11,4:15:11.56:137,12,0	0/1:6,3:9:2.30:70,0,2	1/1:12,3:15:8.89:112,9,0	0/0:10,0:10:5.75:0,6,41	0/0:19,0:19:26.72:0,27,224	0/0:15,0:14:10.08:0,10,140	0/0:25,0:25:68.44:0,68,807	0/1:20,2:15:99:188,0,201	0/1:4,5:9:0.17:48,0,0	0/1:20,20:34:0:0,0,0	1/1:19,4:23:5.01:103,5,0	1/1:6,1:7:1.84:36,2,0	1/1:11,5:16:8.69:63,9,0	1/1:11,4:15:5.63:105,6,0	0/0:27,0:26:67.29:0,67,678	./.	0/0:17,0:16:36.85:0,37,388
chr10	36450206	.	CGTGT	C	973.44	PASS	AB=0.834;AC=21;AF=0.389;AN=54;BaseQRankSum=3.052;DP=542;FS=17.958;HRun=0;HaplotypeScore=189.9436;InbreedingCoeff=0.2782;MQ=39.40;MQ0=16;MQRankSum=-3.225;QD=4.51;ReadPosRankSum=3.602;VQSLOD=1.5029;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:54.06:0,54,943	1/1:4,3:7:1.68:5,2,0	0/0:26,0:4:12.03:0,12,181	0/0:34,0:9:20.47:0,20,241	0/0:16,0:22:17.65:0,18,158	0/0:33,0:32:53.94:0,54,1051	0/0:32,0:29:42.19:0,42,756	0/1:18,0:18:99:201,0,272	0/0:13,0:23:4.95:0,5,179	0/0:31,0:30:81.17:0,81,1562	0/0:11,0:11:20.89:0,21,407	1/1:6,6:14:11.65:135,12,0	1/1:4,3:7:5.77:90,6,0	0/1:8,6:14:5.71:117,0,6	0/0:10,0:10:6.02:0,6,112	0/1:11,0:19:20.71:21,0,92	0/1:14,0:15:25.59:26,0,124	0/0:24,0:24:69.65:0,70,1528	0/1:20,1:14:99:143,0,211	1/1:7,0:7:3:28,3,0	0/0:36,1:31:0:0,0,0	1/1:10,11:21:8.67:105,9,0	0/0:3,2:5:1.55:0,2,4	1/1:12,3:15:5.82:39,6,0	1/1:9,5:14:8.98:98,9,0	0/1:17,0:25:99:113,0,348	./.	0/1:14,0:16:20.92:21,0,185
chr10	36450212	.	CGTGT	C	533.62	PASS	AB=0.874;AC=15;AF=0.278;AN=54;BaseQRankSum=4.254;DP=500;FS=15.115;HRun=0;HaplotypeScore=183.5184;InbreedingCoeff=0.0888;MQ=37.88;MQ0=12;MQRankSum=-1.711;QD=2.79;ReadPosRankSum=3.757;VQSLOD=1.5895;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:39.05:0,39,623	0/0:6,0:6:2.96:0,3,19	0/0:25,0:4:9.03:0,9,134	0/0:37,0:7:16.25:0,16,200	1/1:13,6:19:2.04:31,2,0	0/0:31,0:30:50.98:0,51,854	0/0:33,0:30:21.78:0,22,423	0/0:17,0:17:9.92:0,10,255	0/1:12,10:22:34.34:52,0,34	0/0:29,0:28:71.26:0,71,1003	0/0:10,0:10:18.06:0,18,299	0/1:13,0:13:2.67:3,0,24	0/1:6,0:6:1.18:21,0,1	0/1:10,0:11:16.81:17,0,35	0/0:9,0:9:5.99:0,6,85	0/1:10,8:18:11.97:63,0,12	0/1:13,3:15:45.45:71,0,45	0/0:23,0:23:44.30:0,44,1182	0/1:18,0:13:0.41:0,0,183	0/0:5,0:5:2.98:0,3,22	0/0:31,0:26:0:0,0,0	0/1:19,0:19:0:0,0,1	0/0:5,0:5:2.84:0,3,14	0/0:14,0:14:2.94:0,3,18	1/1:11,0:11:0.89:2,1,0	0/1:15,9:23:99:288,0,107	./.	1/1:11,3:13:2.36:114,2,0
chr10	36450229	.	GCA	G	144.81	PASS	AB=0.973;AC=17;AF=0.340;AN=50;BaseQRankSum=1.525;DP=440;FS=0.854;HRun=0;HaplotypeScore=149.5725;InbreedingCoeff=0.2522;MQ=32.06;MQ0=15;MQRankSum=-1.818;QD=0.95;ReadPosRankSum=-3.647;VQSLOD=1.7084;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:10.28:0,10,221	0/1:5,0:5:0:0,0,0	0/0:38,0:5:12.93:0,13,234	0/0:47,0:7:18.05:0,18,312	0/0:15,0:15:3.14:0,3,61	0/0:25,0:25:26.75:0,27,439	0/0:32,0:30:38.94:0,39,776	0/1:8,0:8:17.73:18,0,31	0/0:17,0:17:12.04:0,12,192	0/0:25,0:22:57.63:0,58,1055	0/0:8,0:8:11.94:0,12,243	1/1:11,0:11:10.58:62,11,0	1/1:4,1:5:3:26,3,0	0/1:9,0:9:15.95:16,0,31	1/1:9,0:9:1.55:4,2,0	0/0:19,0:19:19.15:0,19,261	0/1:19,0:17:21.13:21,0,271	0/1:22,0:22:53.94:54,0,523	0/1:10,1:8:65.19:71,0,65	./.	1/1:20,2:17:1.09:3,1,0	0/1:14,1:15:0:0,0,0	./.	0/1:8,1:9:0:0,0,0	0/1:8,0:8:0:0,0,0	0/0:23,0:22:23.95:0,24,635	./.	0/0:10,0:9:11.02:0,11,264
chr10	36450230	.	CAT	C	255.98	PASS	AB=0.831;AC=15;AF=0.326;AN=46;BaseQRankSum=0.974;DP=428;FS=5.262;HRun=0;HaplotypeScore=146.8425;InbreedingCoeff=0.1738;MQ=32.09;MQ0=12;MQRankSum=-0.961;QD=1.53;ReadPosRankSum=-4.391;VQSLOD=0.7152;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:18,1:19:8.99:9,0,181	./.	0/0:39,0:5:12.91:0,13,209	0/0:47,0:7:15.30:0,15,324	0/0:15,0:15:3.48:0,3,49	0/1:21,0:24:28.19:28,0,341	0/0:31,0:29:39.10:0,39,766	0/1:7,0:7:7.67:17,0,8	0/0:17,0:17:12.02:0,12,136	0/0:25,0:22:38.76:0,39,1012	0/0:8,0:8:12.04:0,12,242	1/1:2,9:11:10.24:67,10,0	1/1:1,4:5:3.01:38,3,0	0/1:3,6:9:7.38:7,0,25	1/1:8,1:9:2.99:24,3,0	0/0:19,0:19:20.94:0,21,222	0/1:16,2:17:0.61:1,0,231	0/1:21,0:22:99:108,0,415	0/1:6,3:7:32.78:88,0,33	./.	0/1:18,2:17:0.15:0,0,0	0/1:3,10:13:0:0,0,0	./.	0/0:4,4:8:0:0,0,0	./.	0/0:23,0:22:55.53:0,56,641	./.	0/0:9,0:9:20.58:0,21,197
chr10	36450236	.	T	TGC	36.78	PASS	AB=0.969;AC=7;AF=0.152;AN=46;BaseQRankSum=3.244;DP=425;FS=21.978;HRun=0;HaplotypeScore=148.3137;InbreedingCoeff=0.2322;MQ=31.06;MQ0=16;MQRankSum=-2.829;QD=0.40;ReadPosRankSum=-1.335;VQSLOD=0.8806;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,1:17:9.03:0,9,134	./.	0/0:36,0:5:12.91:0,13,159	0/0:44,0:7:11.22:0,11,215	0/0:15,0:15:3.01:0,3,46	0/0:21,0:21:16.87:0,17,284	0/0:30,1:29:39.05:0,39,596	0/0:8,0:8:6.55:0,7,81	0/0:19,0:18:12.04:0,12,182	0/0:25,0:22:40.81:0,41,785	0/0:8,0:8:12.04:0,12,183	1/1:13,0:13:2.85:15,3,0	0/1:6,0:6:11.12:37,0,11	0/0:10,0:10:4.96:0,5,20	./.	0/0:19,0:19:21.06:0,21,287	0/1:18,1:17:20.23:20,0,264	0/1:15,2:17:65.68:66,0,372	0/0:11,0:9:4.12:0,4,95	./.	0/1:22,0:17:0.06:0,0,0	0/1:15,0:15:0:0,0,0	./.	0/0:8,0:8:0:0,0,0	0/0:8,0:8:0:0,0,0	0/0:25,0:23:54.56:0,55,744	./.	0/0:7,0:7:18.01:0,18,248
chr10	36450244	.	TGC	T	1528.09	PASS	AB=0.991;AC=23;AF=0.500;AN=46;BaseQRankSum=1.048;DP=392;FS=0.000;HRun=0;HaplotypeScore=118.8927;InbreedingCoeff=0.3372;MQ=31.17;MQ0=18;MQRankSum=-1.544;QD=7.07;ReadPosRankSum=-1.048;VQSLOD=3.1016;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:14:6:0,6,54	1/1:4,1:5:2.68:37,3,0	0/0:28,0:3:6.41:0,6,42	0/0:33,1:3:8.63:0,9,87	1/1:0,13:13:3.01:46,3,0	0/0:19,0:19:3.59:0,4,141	0/1:28,0:25:3.14:3,0,265	0/0:10,0:10:15.21:0,15,95	1/1:4,10:13:12.04:181,12,0	0/0:24,0:20:17.15:0,17,282	0/0:9,0:9:11.89:0,12,117	0/1:12,0:12:23.13:24,0,23	0/1:8,0:8:8.41:8,0,15	0/1:12,0:12:0:0,0,0	./.	1/1:4,11:15:20.95:317,21,0	1/1:7,11:17:13.12:231,13,0	0/1:14,0:14:37.75:38,0,171	0/1:10,1:8:19.86:20,0,57	./.	./.	0/1:18,0:18:0:0,0,0	./.	0/1:6,0:6:0:0,0,0	0/1:10,0:10:0:0,0,0	1/1:10,14:21:22.91:539,23,0	./.	1/1:1,6:7:15.05:229,15,0
chr10	36450246	.	CGT	C	874.12	PASS	AB=0.904;AC=20;AF=0.476;AN=42;BaseQRankSum=0.280;DP=394;FS=0.000;HRun=0;HaplotypeScore=120.7468;InbreedingCoeff=0.2287;MQ=31.08;MQ0=21;MQRankSum=0.722;QD=4.20;ReadPosRankSum=0.299;VQSLOD=2.5045;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:9,5:13:4.59:0,5,15	1/1:5,0:5:2.59:17,3,0	./.	0/0:33,0:3:3.90:0,4,47	1/1:13,0:13:2.98:21,3,0	0/1:14,5:19:3.24:3,0,32	0/1:28,1:27:30.92:31,0,36	0/0:11,0:11:23.51:0,24,229	1/1:13,0:12:11.98:102,12,0	0/1:23,2:21:55.86:63,0,56	0/0:7,2:9:7.02:0,7,37	0/0:14,0:13:0.21:0,0,27	0/1:9,0:8:11.36:11,0,32	./.	./.	1/1:14,0:14:20.72:171,21,0	1/1:19,0:17:0.50:83,1,0	0/1:9,5:14:99:143,0,102	0/0:10,0:7:14.97:0,15,131	./.	./.	0/1:18,0:18:0:0,0,0	./.	0/0:5,0:5:0:0,0,0	./.	1/1:23,0:19:31.56:245,32,0	0/0:2,0:2:3.01:0,3,38	1/1:7,0:7:14.96:120,15,0
chr10	36450274	.	TGTGTGTGC	T	974.29	PASS	AB=1.000;AC=24;AF=0.600;AN=40;BaseQRankSum=1.245;DP=361;FS=1.366;HRun=0;HaplotypeScore=130.0794;InbreedingCoeff=0.1151;MQ=31.33;MQ0=26;MQRankSum=-2.103;QD=3.84;ReadPosRankSum=3.648;VQSLOD=2.1243;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	0/0:7,0:7:3.48:0,3,33	./.	./.	./.	0/1:19,0:17:5.96:37,0,6	0/1:34,0:28:3.18:16,0,3	./.	1/1:10,1:10:8.81:86,9,0	1/1:14,0:13:1.88:93,2,0	./.	1/1:11,0:10:3.39:30,3,0	1/1:10,0:10:4.96:14,5,0	0/1:18,0:17:10.31:21,0,10	./.	1/1:9,4:12:5.61:132,6,0	1/1:15,3:15:0.52:216,1,0	0/1:23,0:23:13.34:206,0,13	1/1:11,0:9:11.32:72,11,0	0/1:9,0:7:0:0,0,0	0/1:26,0:17:0:0,0,0	./.	0/0:6,0:5:0.40:0,0,2	0/1:9,0:7:0.12:1,0,0	0/0:12,0:11:0.88:0,1,2	1/1:20,1:17:9.02:151,9,0	0/1:6,0:6:3.07:3,0,19	0/0:6,0:6:1.82:0,2,5
chr10	36450276	.	T	TGTGC	488.34	PASS	AB=0.942;AC=13;AF=0.271;AN=48;BaseQRankSum=0.587;DP=365;FS=22.124;HRun=0;HaplotypeScore=131.3714;InbreedingCoeff=0.0083;MQ=31.73;MQ0=25;MQRankSum=-3.073;QD=2.57;ReadPosRankSum=0.233;VQSLOD=1.1934;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:5.85:0,6,94	0/0:8,0:8:2.66:0,3,52	./.	./.	./.	0/1:18,3:19:12.97:13,0,169	0/1:30,5:29:57.15:57,0,331	0/0:10,0:9:18.33:0,18,169	0/0:11,0:10:14.84:0,15,191	0/0:16,0:15:3.04:0,3,336	0/0:7,1:8:9.03:0,9,157	0/0:12,0:11:1.28:0,1,18	0/0:11,0:10:0.52:0,1,59	1/1:19,0:18:0.51:19,1,0	./.	0/0:13,0:12:5.30:0,5,169	0/1:17,0:14:3.86:4,0,123	0/1:17,7:24:99:457,0,125	0/1:10,0:9:6.04:6,0,40	0/0:9,0:7:0:0,0,0	0/0:25,0:17:0:0,0,0	0/1:15,0:15:0:0,0,0	0/1:6,0:5:0:1,0,0	0/1:9,0:7:0.13:0,0,0	1/1:12,0:11:0.34:1,0,0	0/1:21,0:18:34.84:35,0,350	0/0:6,0:6:4.27:0,4,31	0/0:6,0:6:18.06:0,18,281
chr10	36450286	.	TGTGC	T	416.87	PASS	AB=0.967;AC=18;AF=0.375;AN=48;BaseQRankSum=4.726;DP=357;FS=0.876;HRun=0;HaplotypeScore=135.2031;InbreedingCoeff=0.2201;MQ=31.43;MQ0=21;MQRankSum=-4.633;QD=2.24;ReadPosRankSum=3.167;VQSLOD=2.1607;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:2.97:0,3,20	0/1:8,0:8:3.59:4,0,69	./.	./.	./.	0/0:19,1:18:14.99:0,15,166	0/0:32,0:26:20.52:0,21,209	1/1:6,0:4:0.29:1,0,0	0/0:8,0:8:11.45:0,11,71	0/0:16,0:15:5.41:0,5,314	0/0:10,0:10:2.99:0,3,44	1/1:7,5:12:7.27:110,7,0	1/1:11,0:10:4.15:22,4,0	0/1:21,0:20:42.34:84,0,42	./.	0/1:14,0:13:14.13:18,0,14	0/1:15,0:13:43.22:47,0,43	0/1:25,0:25:33.69:34,0,352	1/1:8,0:7:17.77:219,18,0	0/1:8,1:7:0:0,0,0	0/1:25,0:17:0:0,0,0	0/1:15,0:15:0:0,0,0	0/0:5,1:5:0.47:0,0,1	0/1:7,3:8:0:1,0,0	0/0:12,0:11:0.47:0,0,1	0/0:21,0:18:14.85:0,15,148	0/1:6,0:6:0.05:0,0,1	0/0:6,0:6:9:0,9,96
chr10	36450290	.	CGT	C	446.73	PASS	AB=0.854;AC=20;AF=0.435;AN=46;BaseQRankSum=3.238;DP=362;FS=8.778;HRun=0;HaplotypeScore=133.2197;InbreedingCoeff=-0.0758;MQ=29.73;MQ0=23;MQRankSum=-0.283;QD=1.77;ReadPosRankSum=0.503;VQSLOD=1.9280;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:17,3:20:0:0,0,0	0/1:3,5:8:19.15:19,0,47	./.	./.	./.	0/1:20,0:18:33.82:34,0,86	0/0:33,0:27:11.78:0,12,135	./.	0/1:7,0:7:27.68:28,0,35	0/1:12,1:12:21.18:21,0,180	0/1:10,0:10:0:0,0,0	0/1:12,0:12:8.98:36,0,9	0/1:6,6:11:1.09:74,0,1	0/1:13,8:20:44.93:76,0,45	./.	1/1:14,0:13:5.53:31,6,0	0/1:16,0:13:19.98:20,0,46	0/1:22,2:24:41.42:41,0,323	1/1:4,4:6:13.21:146,13,0	0/1:8,1:7:0:0,0,0	0/1:20,5:17:0:0,0,0	0/1:5,10:15:0:0,0,0	0/0:7,0:6:0.04:0,0,0	0/1:11,0:10:0.07:0,0,0	0/0:8,5:12:0.47:0,0,1	0/0:24,0:21:19.96:0,20,191	0/1:2,4:6:3.86:35,0,4	0/0:3,0:3:5.79:0,6,73
chr10	36450292	.	T	TGC	308.01	PASS	AB=0.953;AC=18;AF=0.346;AN=52;BaseQRankSum=4.359;DP=375;FS=3.603;HRun=0;HaplotypeScore=142.9037;InbreedingCoeff=0.0814;MQ=29.17;MQ0=25;MQRankSum=-2.927;QD=1.60;ReadPosRankSum=0.450;VQSLOD=2.6378;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:20,0:20:0:0,0,0	0/1:7,1:8:19.43:19,0,40	./.	./.	0/0:8,0:6:0:0,0,0	0/0:20,0:18:11.99:0,12,137	0/0:31,0:25:14.76:0,15,145	0/0:6,0:4:8.74:0,9,52	1/1:8,0:8:4.67:45,5,0	0/0:13,0:11:2.24:0,2,219	0/0:10,0:10:2.96:0,3,20	0/1:11,0:12:22.24:82,0,22	0/1:11,1:11:3.20:34,0,3	0/1:21,1:21:34.20:95,0,34	0/1:5,0:5:0:0,0,0	0/1:13,0:13:10.25:14,0,10	0/0:17,0:14:1.63:0,2,119	0/0:24,0:24:7.90:0,8,349	0/1:9,1:7:13.93:125,0,14	0/0:11,1:10:0:0,0,0	0/1:25,2:17:0.17:0,0,0	0/1:12,3:15:0:0,0,0	1/1:7,0:6:0.38:1,0,0	0/1:12,0:11:0.02:0,0,0	1/1:14,0:13:0.26:0,0,0	0/0:23,0:20:26.82:0,27,250	0/1:8,0:8:6.48:6,0,17	0/0:4,0:4:5.98:0,6,66
chr10	36450293	.	G	GTGCA	469.74	PASS	AB=0.969;AC=19;AF=0.380;AN=50;BaseQRankSum=2.299;DP=381;FS=1.898;HRun=0;HaplotypeScore=151.3141;InbreedingCoeff=-0.2247;MQ=28.72;MQ0=26;MQRankSum=-1.942;QD=1.97;ReadPosRankSum=-0.513;VQSLOD=2.2784;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:0:0,0,0	0/1:8,0:8:6.23:6,0,52	./.	./.	0/0:8,0:6:0.47:0,0,1	0/1:20,0:18:14.31:14,0,109	0/0:30,0:24:11.31:0,11,151	1/1:8,0:4:6.01:63,6,0	0/1:8,0:8:21.34:21,0,24	0/1:13,0:11:24.02:24,0,250	./.	0/1:9,4:13:23.30:113,0,23	0/1:12,0:11:5.79:63,0,6	0/1:22,0:21:47.40:83,0,47	0/0:5,0:5:0:0,0,0	0/1:12,0:12:3.72:5,0,4	0/1:17,0:14:34.23:34,0,43	0/1:27,0:27:48.60:49,0,422	0/1:10,0:7:51.25:69,0,51	0/0:12,0:10:2.88:0,3,15	0/0:26,0:17:0.47:0,0,1	0/1:16,0:16:0.10:0,0,0	0/1:5,2:6:0.25:1,0,0	0/0:13,0:12:0.30:0,0,1	1/1:14,0:13:0.46:1,0,0	0/1:23,0:20:7.43:7,0,263	0/1:8,0:8:5.79:32,0,6	0/0:4,0:4:6.02:0,6,96
chr10	36450294	.	T	TGC	419.33	PASS	AB=0.985;AC=22;AF=0.440;AN=50;BaseQRankSum=1.746;DP=384;FS=15.069;HRun=0;HaplotypeScore=144.6895;InbreedingCoeff=-0.0628;MQ=28.69;MQ0=27;MQRankSum=-1.066;QD=1.51;ReadPosRankSum=0.268;VQSLOD=1.6542;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:20,1:21:0:0,0,0	0/0:8,0:8:3.20:0,3,46	./.	./.	0/0:7,1:6:0.47:0,0,1	0/1:20,0:18:33.84:34,0,77	0/0:29,1:24:11.53:0,12,90	0/1:7,0:4:16.25:32,0,16	1/1:6,2:8:4.73:109,5,0	0/1:12,1:11:99:103,0,187	./.	0/1:13,0:13:24.06:24,0,31	0/0:12,0:11:8.79:0,9,39	0/1:22,0:21:11.77:12,0,37	0/1:5,0:5:0:0,0,0	1/1:9,3:12:5.68:73,6,0	0/1:16,1:14:27.29:63,0,27	0/1:28,0:28:10.84:11,0,302	0/1:10,0:7:12.18:12,0,21	0/0:12,0:10:2.90:0,3,16	0/1:28,0:19:0.17:0,0,0	0/1:16,0:16:0:0,0,0	1/1:7,0:6:0.38:1,0,0	0/1:13,0:12:0.22:0,0,0	1/1:14,0:13:0.26:0,0,0	0/1:21,1:19:66.19:66,0,166	0/0:8,0:8:10.25:0,10,54	0/0:4,0:4:5.98:0,6,66
chr10	36450304	.	C	CGT	867.71	PASS	AB=0.981;AC=26;AF=0.520;AN=50;BaseQRankSum=4.030;DP=400;FS=10.467;HRun=0;HaplotypeScore=141.9255;InbreedingCoeff=0.2397;MQ=29.53;MQ0=28;MQRankSum=-2.484;QD=3.23;ReadPosRankSum=-0.488;VQSLOD=1.9128;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:26:0:0,0,0	0/1:8,0:8:35.99:46,0,36	./.	./.	0/0:6,0:5:0.47:0,0,1	0/0:18,0:16:5.95:0,6,66	0/0:34,0:27:11.88:0,12,123	1/1:7,0:3:8.96:67,9,0	0/0:11,0:11:5.83:0,6,38	0/1:11,0:9:32.10:32,0,159	./.	1/1:11,0:15:16.84:125,17,0	1/1:10,2:11:8.85:101,9,0	0/1:20,2:21:11.36:105,0,11	0/1:3,0:3:0:0,0,0	0/0:11,0:11:1.07:0,1,12	0/1:17,0:14:19.56:20,0,104	0/1:30,0:30:99:140,0,332	1/1:11,0:8:13.56:216,14,0	0/1:11,0:10:0:0,0,0	0/1:28,1:20:0:0,0,0	1/1:20,0:21:2.99:24,3,0	1/1:5,0:6:0.38:1,0,0	0/1:15,0:14:0.22:0,0,0	1/1:14,1:14:0.26:0,0,0	0/0:24,0:20:14.79:0,15,194	1/1:7,1:8:10.83:123,11,0	0/0:4,0:4:4.26:0,4,46
chr10	36450306	.	TGC	T	932.63	PASS	AB=0.858;AC=26;AF=0.520;AN=50;BaseQRankSum=2.668;DP=403;FS=9.739;HRun=0;HaplotypeScore=141.0695;InbreedingCoeff=0.1473;MQ=29.53;MQ0=28;MQRankSum=-3.605;QD=3.18;ReadPosRankSum=-1.372;VQSLOD=2.0382;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:26:0:0,0,0	0/1:2,6:8:30.69:37,0,31	./.	./.	./.	0/0:18,0:16:5.02:0,5,63	0/0:34,0:27:6:0,6,119	1/1:4,3:3:9.03:131,9,0	0/0:11,0:11:5.79:0,6,35	0/1:9,0:9:29.40:29,0,160	0/1:8,0:8:0:0,0,0	1/1:8,7:15:10.18:138,10,0	1/1:5,7:11:8.86:116,9,0	0/1:11,11:21:22.53:106,0,23	0/1:3,0:3:0:0,0,0	1/1:11,0:11:0.80:3,1,0	0/1:18,0:15:37.83:38,0,58	0/1:29,0:31:60.88:61,0,393	1/1:6,5:8:23.73:235,24,0	0/1:7,5:10:0:0,0,0	0/1:20,9:20:0:1,0,0	1/1:4,17:21:2.85:37,3,0	0/0:5,2:6:0.04:0,0,0	0/1:8,8:15:0.07:1,0,0	0/0:7,8:14:0.47:0,0,1	0/1:24,0:20:8.25:8,0,211	1/1:3,5:8:11.38:117,11,0	0/0:4,0:4:4.29:0,4,50
chr10	36450308	.	CGTGCGTGTGTGCGT	C	789.60	PASS	AB=0.996;AC=30;AF=0.600;AN=50;BaseQRankSum=0.211;DP=411;FS=19.712;HRun=0;HaplotypeScore=167.5891;InbreedingCoeff=0.2132;MQ=29.96;MQ0=28;MQRankSum=-0.974;QD=2.49;ReadPosRankSum=-0.666;VQSLOD=1.1588;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:26:0:0,0,0	0/0:10,0:10:7.67:0,8,48	./.	./.	0/1:6,0:5:0:0,0,0	0/0:19,0:17:8.39:0,8,102	0/1:35,0:28:10.54:11,0,69	0/1:7,0:4:12.29:12,0,17	1/1:11,0:11:0.63:40,1,0	0/0:11,0:9:12:0,12,135	./.	0/1:16,0:16:7.76:8,0,47	1/1:12,0:11:0.54:6,1,0	0/1:22,0:21:17.96:18,0,33	0/1:3,0:3:0:0,0,0	1/1:10,0:10:3.22:86,3,0	1/1:18,0:15:13.78:307,14,0	0/1:31,0:32:28.30:28,0,355	1/1:11,0:8:9.47:80,9,0	1/1:12,0:10:0.47:1,0,0	1/1:31,0:22:0.26:1,0,0	1/1:22,0:22:2.24:8,2,0	0/0:7,0:6:0.16:0,0,1	1/1:16,0:15:1.38:2,1,0	0/0:15,0:14:1.55:0,2,4	1/1:11,12:19:5.82:250,6,0	0/0:8,0:8:11.47:0,11,81	1/1:4,0:4:7.07:61,7,0
chr10	36450310	.	TGC	T	223.41	PASS	AB=0.934;AC=23;AF=0.460;AN=50;BaseQRankSum=1.952;DP=422;FS=6.137;HRun=0;HaplotypeScore=150.6697;InbreedingCoeff=0.0471;MQ=31.22;MQ0=29;MQRankSum=-0.243;QD=0.71;ReadPosRankSum=0.052;VQSLOD=2.2254;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:26:0:0,0,0	0/0:10,1:11:2.52:0,3,24	./.	./.	./.	0/0:21,0:19:1.50:0,2,20	0/1:34,0:28:15.52:16,0,25	0/0:8,0:5:0.22:0,0,16	0/0:11,0:11:5.85:0,6,34	0/1:11,0:9:4.33:4,0,86	0/1:8,0:8:0:0,0,0	0/1:16,0:16:12.02:12,0,18	1/1:12,0:11:5.67:17,6,0	0/1:17,4:20:12.44:12,0,43	0/1:3,0:3:0:0,0,0	0/1:10,0:10:3.77:4,0,11	0/0:19,0:16:16.69:0,17,120	0/1:30,2:33:74.06:74,0,184	1/1:9,2:8:2.85:120,3,0	0/1:8,3:9:0:0,0,0	0/1:22,9:22:0:1,0,0	1/1:22,1:23:0.74:2,1,0	0/0:7,0:6:0.04:0,0,0	0/1:15,3:17:0.12:0,0,0	1/1:15,1:15:2.27:12,2,0	0/1:22,0:18:3.70:4,0,91	1/1:7,1:8:1.80:56,2,0	0/0:8,0:8:2.22:0,2,23
chr10	36450312	.	CGT	C	296.50	PASS	AB=0.944;AC=23;AF=0.426;AN=54;BaseQRankSum=1.696;DP=435;FS=3.082;HRun=0;HaplotypeScore=141.9522;InbreedingCoeff=0.3570;MQ=31.83;MQ0=30;MQRankSum=-0.068;QD=1.24;ReadPosRankSum=-0.419;VQSLOD=2.6273;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:26:0:0,0,0	1/1:9,2:11:1.19:10,1,0	0/0:9,0:1:2.99:0,3,24	0/0:10,0:1:2.99:0,3,24	./.	0/0:22,0:20:5.93:0,6,63	0/0:37,0:30:8.38:0,8,85	0/1:9,0:6:10.57:14,0,11	0/0:11,0:11:2.41:0,2,18	0/0:11,0:9:22.31:0,22,196	0/1:8,0:8:0:0,0,0	0/1:11,5:16:1.89:33,0,2	1/1:10,2:11:3.50:21,4,0	0/1:18,3:20:22.84:23,0,31	0/1:4,0:4:0:0,0,0	0/1:10,0:10:1.79:2,0,10	0/0:19,0:16:14.18:0,14,78	0/0:33,0:33:4.22:0,4,383	1/1:7,4:8:11.48:134,11,0	0/1:10,1:9:0:0,0,0	0/1:30,2:23:0:0,0,0	1/1:20,3:23:5.71:39,6,0	0/0:5,2:6:0.04:0,0,0	1/1:12,8:19:8.86:64,9,0	1/1:17,1:17:2.48:31,2,0	0/0:23,0:19:27.69:0,28,228	1/1:6,2:8:7.71:66,8,0	0/0:8,0:8:5.43:0,5,50
chr10	36450320	.	CGTGTGTGT	C	358.21	PASS	AB=0.825;AC=7;AF=0.125;AN=56;BaseQRankSum=-1.630;DP=490;FS=9.248;HRun=0;HaplotypeScore=172.5960;InbreedingCoeff=0.1779;MQ=35.03;MQ0=28;MQRankSum=0.119;QD=3.55;ReadPosRankSum=0.356;VQSLOD=1.5557;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,15:31:3.91:0,4,16	0/0:9,0:12:8.95:0,9,58	0/0:10,0:2:3.01:0,3,54	0/0:14,0:2:5.97:0,6,73	0/0:7,0:6:2.70:0,3,22	0/0:10,17:25:1.25:0,1,3	1/1:20,17:30:2.11:75,2,0	0/0:11,0:9:8.20:0,8,228	0/0:11,0:11:3.89:0,4,34	0/1:9,5:12:18.76:173,0,19	0/0:5,6:11:2.98:0,3,24	0/0:19,0:20:17.96:0,18,209	0/0:12,0:11:4.56:0,5,35	0/0:21,0:21:5.03:0,5,31	1/1:7,0:7:3.53:26,4,0	0/0:10,0:11:4.10:0,4,15	0/0:21,0:21:12.87:0,13,95	0/1:22,12:34:17.08:192,0,17	0/0:12,0:8:15.07:0,15,100	0/1:9,0:8:0:0,0,0	0/0:40,0:32:5.86:0,6,74	0/0:15,0:22:1.92:0,2,34	0/0:8,0:7:3.66:0,4,52	0/0:18,0:19:7.81:0,8,124	0/0:20,0:20:9.89:0,10,87	0/0:21,0:20:20.94:0,21,173	0/0:11,0:11:14.43:0,14,142	0/0:4,0:8:14.13:0,14,73
chr10	36450792	.	A	ACTCTT	14163.25	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=19.001;DP=651;FS=0.000;HRun=0;HaplotypeScore=170.3175;InbreedingCoeff=0.9999;MQ=89.00;MQ0=0;MQRankSum=-18.202;QD=62.39;ReadPosRankSum=-0.421;VQSLOD=5.3797;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,129,2875	1/1:5,13:18:40.32:1140,40,0	0/0:34,0:34:93.70:0,94,2110	0/0:27,0:27:78.27:0,78,1697	0/0:35,0:35:99:0,102,2274	0/0:20,0:20:60.21:0,60,1337	0/0:18,0:18:54.19:0,54,1187	1/1:9,6:14:33.11:859,33,0	0/0:35,0:35:99:0,105,2252	0/0:23,0:23:69.23:0,69,1483	0/0:12,0:12:36.12:0,36,803	1/1:8,16:24:60.20:1446,60,0	1/1:5,8:13:39.13:980,39,0	1/1:7,15:22:60.19:1464,60,0	0/0:41,0:41:99:0,120,2591	0/0:27,0:27:78.25:0,78,1665	0/0:35,0:35:99:0,105,2226	0/0:25,0:25:75.26:0,75,1669	1/1:7,9:16:42.12:972,42,0	1/1:4,13:17:51.16:1201,51,0	1/1:6,10:16:36.12:925,36,0	1/1:3,15:18:48.16:1215,48,0	1/1:2,14:16:45.15:1133,45,0	1/1:9,10:19:36.80:921,37,0	1/1:8,9:17:36.02:850,36,0	0/0:32,0:32:93.32:0,93,2071	1/1:6,10:16:45.11:1058,45,0	0/0:17,0:17:51.11:0,51,1014
chr10	36450794	.	A	AGGT	11021.48	PASS	AB=0.609;AC=25;AF=0.446;AN=56;BaseQRankSum=18.940;DP=662;FS=0.628;HRun=0;HaplotypeScore=154.9032;InbreedingCoeff=0.9390;MQ=90.62;MQ0=0;MQRankSum=-18.147;QD=47.30;ReadPosRankSum=-1.363;VQSLOD=5.7746;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,129,2405	1/1:5,13:18:51.17:948,51,0	0/0:36,0:36:99:0,105,1906	0/0:29,0:29:81.28:0,81,1486	0/0:35,0:35:99:0,105,1949	0/0:21,0:21:63.20:0,63,1143	0/0:19,0:19:54.19:0,54,1007	1/1:14,6:19:48.11:878,48,0	0/0:35,0:35:99:0,105,1893	0/0:23,0:23:69.24:0,69,1285	0/0:12,0:12:36.12:0,36,671	1/1:11,16:27:78.27:1420,78,0	1/1:5,8:13:33.11:608,33,0	1/1:10,15:25:51.31:1287,51,0	0/0:41,0:41:99:0,120,2198	0/0:26,0:26:78.27:0,78,1438	0/0:34,0:34:99:0,99,1846	0/0:25,0:25:75.26:0,75,1397	1/1:7,9:16:18.67:640,19,0	1/1:2,13:15:42.14:777,42,0	1/1:7,10:17:39.12:681,39,0	1/1:4,15:19:54.17:962,54,0	1/1:4,14:18:48.16:875,48,0	1/1:4,10:14:32.85:552,33,0	0/1:5,9:14:6.85:576,0,7	0/0:33,0:33:96.32:0,96,1761	1/1:7,10:17:27.74:817,28,0	0/0:17,0:17:51.17:0,51,950
chr10	36451479	.	AGTGT	A	798.59	PASS	AB=0.953;AC=23;AF=0.575;AN=40;BaseQRankSum=1.924;DP=494;FS=5.368;HRun=0;HaplotypeScore=102.5143;InbreedingCoeff=0.0652;MQ=70.65;MQ0=12;MQRankSum=-0.113;QD=3.47;ReadPosRankSum=2.083;VQSLOD=1.6204;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:23:2.63:80,3,0	1/1:4,0:4:3:26,3,0	./.	./.	./.	0/1:6,0:8:11.06:44,0,11	1/1:22,0:22:8.92:102,9,0	0/0:22,0:22:3.74:0,4,9	1/1:10,0:15:5.83:52,6,0	1/1:21,0:21:2.85:45,3,0	0/1:12,0:12:5.96:29,0,6	0/1:16,0:16:15.93:16,0,91	0/1:13,0:13:13.53:39,0,14	0/1:18,0:18:10.97:22,0,11	1/1:7,5:12:9.03:138,9,0	1/1:2,0:6:9.01:84,9,0	1/1:22,0:23:6.01:56,6,0	0/1:17,2:19:26.58:150,0,27	./.	./.	0/0:40,0:38:5.99:0,6,48	0/0:15,0:15:11.77:0,12,75	0/0:13,0:13:3.01:0,3,60	0/0:27,0:27:15:0,15,179	./.	./.	0/1:15,0:14:11.07:52,0,11	./.
chr10	36451533	.	TGTTTCG	T	2335.80	PASS	AB=1.000;AC=25;AF=0.446;AN=56;BaseQRankSum=8.711;DP=383;FS=2.375;HRun=0;HaplotypeScore=146.5007;InbreedingCoeff=0.9000;MQ=70.32;MQ0=10;MQRankSum=-10.103;QD=15.78;ReadPosRankSum=-6.889;VQSLOD=0.7723;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:50.57:0,51,1435	1/1:6,1:7:15.61:132,16,0	0/0:35,0:23:45.33:0,45,1562	0/0:34,0:23:54.89:0,55,1200	0/0:14,0:14:28.93:0,29,639	0/0:8,0:8:15.05:0,15,357	0/0:16,0:16:45.15:0,45,1074	1/1:14,0:14:42.07:447,42,0	0/0:13,0:13:28.69:0,29,554	0/0:14,0:14:42.14:0,42,1035	0/0:11,0:11:27.09:0,27,799	0/1:10,0:10:4.95:76,0,5	1/1:7,2:9:26.83:314,27,0	1/1:11,0:11:30.43:256,30,0	0/0:12,0:12:27.09:0,27,606	0/0:11,0:11:32.64:0,33,601	0/0:14,0:14:34.76:0,35,658	0/0:19,0:19:49.81:0,50,1103	1/1:6,0:4:12.03:136,12,0	1/1:5,0:5:14.41:82,14,0	1/1:16,1:17:17.57:160,18,0	1/1:7,2:9:17.16:103,17,0	1/1:15,0:14:10.25:103,10,0	1/1:19,0:19:7.93:153,8,0	1/1:12,1:13:35.30:254,35,0	0/0:9,0:8:24.08:0,24,570	1/1:11,2:13:31:341,31,0	0/0:2,0:2:6.02:0,6,123
chr10	36451536	.	TTCG	T	4582.78	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=7.419;DP=381;FS=5.628;HRun=0;HaplotypeScore=124.9766;InbreedingCoeff=0.9737;MQ=74.16;MQ0=9;MQRankSum=-10.489;QD=32.27;ReadPosRankSum=-5.665;VQSLOD=3.4435;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:56.51:0,57,1402	1/1:1,6:7:18.04:220,18,0	0/0:38,0:26:42.63:0,43,1638	0/0:34,0:23:57.27:0,57,1334	0/0:13,0:13:36.12:0,36,797	0/0:9,0:9:21.07:0,21,467	0/0:15,0:15:45.15:0,45,1063	1/1:0,14:14:42.14:781,42,0	0/0:14,0:14:31.82:0,32,668	0/0:14,0:14:42.11:0,42,930	0/0:11,0:11:27.09:0,27,665	1/1:0,9:9:21.07:317,21,0	1/1:5,4:9:27.09:423,27,0	1/1:3,8:11:33.04:438,33,0	0/0:13,0:13:30.10:0,30,678	0/0:12,0:12:36.12:0,36,794	0/0:14,0:14:36.12:0,36,834	0/0:19,0:19:47.75:0,48,1077	1/1:1,5:4:12.04:223,12,0	1/1:1,4:5:15.05:195,15,0	1/1:4,12:16:20.07:280,20,0	1/1:2,7:9:18.06:223,18,0	1/1:1,13:13:23.93:312,24,0	1/1:3,13:16:20.94:318,21,0	1/1:3,10:13:35.97:447,36,0	0/0:9,0:9:27.05:0,27,598	1/1:6,7:13:32.80:405,33,0	0/0:2,0:2:6.02:0,6,147
chr10	36451537	.	TCG	T	2766.46	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=9.420;DP=380;FS=4.334;HRun=0;HaplotypeScore=126.0101;InbreedingCoeff=0.9734;MQ=74.30;MQ0=9;MQRankSum=-9.574;QD=19.48;ReadPosRankSum=-6.521;VQSLOD=2.2024;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:45.63:0,46,1161	1/1:7,0:7:18.05:214,18,0	0/0:37,1:26:36.64:0,37,1362	0/0:34,0:23:54.83:0,55,1030	0/0:13,0:13:36.07:0,36,635	0/0:9,0:9:21.07:0,21,399	0/0:15,0:15:45.11:0,45,855	1/1:14,0:14:41.46:273,41,0	0/0:14,0:14:31.35:0,31,576	0/0:14,0:14:38.95:0,39,673	0/0:11,0:11:27.09:0,27,548	1/1:9,0:9:20.91:206,21,0	1/1:7,2:9:26.89:257,27,0	1/1:9,2:11:32.89:322,33,0	0/0:13,0:13:30.09:0,30,554	0/0:12,0:12:36.12:0,36,692	0/0:14,0:14:36.12:0,36,703	0/0:19,0:19:48.16:0,48,917	1/1:6,0:4:11.87:79,12,0	1/1:4,0:5:14.96:168,15,0	1/1:13,3:16:21.43:208,21,0	1/1:9,0:9:18.05:223,18,0	1/1:14,0:13:24.01:275,24,0	1/1:13,3:16:20.65:171,21,0	1/1:11,2:13:35.81:354,36,0	0/0:9,0:9:24.08:0,24,472	1/1:11,2:13:29.63:244,30,0	0/0:2,0:2:6.02:0,6,121
chr10	36454470	.	C	CTGTG	785.29	PASS	AB=0.972;AC=26;AF=0.500;AN=52;BaseQRankSum=-1.929;DP=634;FS=0.743;HRun=0;HaplotypeScore=122.5091;InbreedingCoeff=0.2453;MQ=69.86;MQ0=10;MQRankSum=0.794;QD=1.75;ReadPosRankSum=-0.340;VQSLOD=2.3550;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:33,0:33:5.20:84,5,0	0/1:8,0:9:0.97:1,0,141	./.	./.	0/1:24,0:25:0:0,0,0	0/1:20,0:20:30.59:106,0,31	0/1:26,0:24:34.56:35,0,53	0/1:23,0:23:13.96:15,0,14	1/1:11,0:13:2.04:6,2,0	1/1:24,0:25:12.11:73,12,0	1/1:17,0:17:0.70:20,1,0	0/1:14,0:19:0.03:62,0,0	0/0:15,0:14:15.05:0,15,220	0/0:17,0:19:13.34:0,13,149	1/1:19,0:18:11.10:67,11,0	0/1:18,0:20:6.16:6,0,116	0/0:26,0:28:18.06:0,18,130	1/1:15,0:16:17.88:105,18,0	0/0:15,0:15:5.97:0,6,52	0/1:22,0:23:1:1,0,83	0/1:55,0:53:13.52:14,0,137	0/0:19,0:20:13.19:0,13,73	1/1:22,0:21:8.99:118,9,0	1/1:20,20:46:11.57:223,12,0	0/0:15,0:15:8.75:0,9,84	0/1:23,0:27:10.34:10,0,52	0/0:10,0:10:11.60:0,12,113	0/0:4,0:3:2.81:0,3,27
chr10	36455081	.	C	CTGTTGT	7929.72	PASS	AB=0.980;AC=31;AF=0.596;AN=52;BaseQRankSum=-4.610;DP=1275;FS=6.618;HRun=0;HaplotypeScore=211.2878;InbreedingCoeff=-0.6576;MQ=24.91;MQ0=210;MQRankSum=1.549;QD=6.22;ReadPosRankSum=-7.094;VQSLOD=0.5139;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:32,1:18:10.66:265,11,0	0/1:17,0:10:17.50:18,0,23	./.	./.	0/1:45,0:39:99:208,0,483	0/1:21,16:22:14.96:15,0,20	0/1:62,0:30:61.42:271,0,61	1/1:43,0:17:20.07:551,20,0	0/1:77,0:37:99:192,0,201	0/1:64,1:29:99:404,0,204	1/1:16,12:23:1:147,1,0	0/1:56,0:29:99:182,0,254	0/1:56,0:33:54.72:682,0,55	0/1:59,0:36:11.55:402,0,12	0/1:87,1:53:57.41:777,0,57	0/1:78,0:43:99:177,0,442	0/1:51,0:28:46.27:46,0,157	1/1:39,0:25:1.08:384,1,0	1/1:19,12:17:42.89:781,43,0	0/1:41,1:30:99:486,0,238	0/1:66,0:35:17.96:382,0,18	0/1:51,0:37:99:363,0,189	0/1:31,0:26:65.71:66,0,277	0/1:75,0:42:27.61:243,0,28	0/1:26,0:18:44.90:299,0,45	0/1:58,0:34:99:157,0,455	0/1:39,0:29:3.42:428,0,3	0/1:12,0:7:0.77:1,0,81
chr10	36455228	.	TTGC	T	252.31	PASS	AB=0.991;AC=16;AF=0.348;AN=46;BaseQRankSum=0.786;DP=967;FS=4.264;HRun=0;HaplotypeScore=59.4117;InbreedingCoeff=-0.0732;MQ=14.05;MQ0=399;MQRankSum=-1.277;QD=0.55;ReadPosRankSum=0.065;VQSLOD=1.3404;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:40,1:14:0.88:1,0,116	0/0:12,0:3:3.01:0,3,48	./.	./.	0/1:19,0:10:6.19:6,0,68	0/1:13,0:4:10.96:11,0,95	0/1:38,0:9:25.02:34,0,25	./.	0/0:45,0:5:2.94:0,3,18	0/1:54,0:15:6.68:7,0,229	./.	0/0:57,0:19:7.82:0,8,116	0/1:39,0:16:13.35:13,0,69	0/0:29,0:8:14.09:0,14,103	0/1:66,0:10:23.10:23,0,65	0/1:54,1:10:8.10:56,0,8	0/0:39,0:13:8.24:0,8,83	0/1:51,3:26:39.60:40,0,196	0/0:21,0:2:3.01:0,3,56	1/1:19,0:7:8.53:49,9,0	0/0:84,0:16:8.69:0,9,59	0/1:32,0:12:2.47:16,0,2	0/0:10,0:4:8.55:0,9,60	./.	0/0:11,0:3:3.01:0,3,33	1/1:22,0:5:7.65:44,8,0	0/0:30,0:16:0.06:0,0,50	1/1:5,2:5:2.09:86,2,0
chr10	36455231	.	CTGT	C	177.05	PASS	AB=0.979;AC=14;AF=0.304;AN=46;BaseQRankSum=2.334;DP=998;FS=1.222;HRun=0;HaplotypeScore=62.1762;InbreedingCoeff=-0.2083;MQ=14.14;MQ0=407;MQRankSum=-3.008;QD=0.37;ReadPosRankSum=-0.254;VQSLOD=1.5715;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:40,1:14:20.13:20,0,129	0/0:13,0:4:3.01:0,3,57	./.	./.	0/0:20,0:11:11.04:0,11,107	0/0:11,2:4:6.49:0,6,91	0/1:41,2:12:65.02:65,0,114	./.	0/0:45,0:5:3.01:0,3,35	0/1:52,2:14:54.46:54,0,263	./.	0/0:58,0:20:18.81:0,19,134	0/1:39,0:16:13.04:13,0,15	0/0:29,0:8:10.64:0,11,87	0/1:66,2:10:0.99:1,0,61	0/1:60,1:11:24.70:25,0,40	0/0:40,0:13:9.83:0,10,119	0/1:51,1:24:19.60:20,0,195	0/0:21,0:2:5.98:0,6,59	1/1:22,0:9:0.21:7,0,0	0/0:83,0:18:11.15:0,11,140	0/1:33,0:13:7.93:8,0,17	0/0:9,0:4:10.56:0,11,65	./.	0/0:12,0:3:2.88:0,3,15	0/1:22,1:7:43.66:44,0,58	0/1:32,0:17:7.57:8,0,31	1/1:8,0:6:1.69:39,2,0
chr10	36455246	.	CTGT	C	442.82	PASS	AB=1.000;AC=13;AF=0.271;AN=48;BaseQRankSum=3.585;DP=1087;FS=5.845;HRun=0;HaplotypeScore=69.8007;InbreedingCoeff=-0.0501;MQ=14.24;MQ0=431;MQRankSum=-1.101;QD=1.17;ReadPosRankSum=1.384;VQSLOD=0.8197;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:42,0:14:8.92:9,0,171	0/0:14,0:4:2.98:0,3,21	./.	./.	0/0:25,0:14:3.32:0,3,182	0/0:16,0:5:3.48:0,3,59	0/0:53,1:17:16.86:0,17,344	./.	0/0:47,1:8:11.96:0,12,123	0/0:59,0:15:9.51:0,10,360	0/0:15,0:6:2.98:0,3,21	0/1:69,0:22:99:125,0,128	1/1:35,1:15:20.98:201,21,0	0/1:33,0:10:72.10:80,0,72	0/0:67,0:12:6.08:0,6,140	0/0:70,0:11:4.32:0,4,155	0/0:42,2:13:12.03:0,12,157	0/1:52,0:25:5.38:5,0,321	0/0:18,0:2:3.01:0,3,54	1/1:29,0:10:6.62:44,7,0	0/0:78,1:16:12.51:0,13,251	0/1:33,0:14:2.68:30,0,3	0/1:11,0:5:18.31:18,0,101	0/0:93,0:16:2.80:0,3,13	./.	0/1:27,0:10:28.16:28,0,113	0/1:37,0:19:33.84:34,0,56	0/1:10,0:8:5.41:5,0,37
chr10	36455255	.	TTGC	T	1004.40	PASS	AB=0.931;AC=19;AF=0.396;AN=48;BaseQRankSum=0.529;DP=1111;FS=14.681;HRun=0;HaplotypeScore=72.4637;InbreedingCoeff=-0.2996;MQ=14.49;MQ0=425;MQRankSum=-1.124;QD=1.49;ReadPosRankSum=0.486;VQSLOD=0.4893;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:41,1:13:30.17:30,0,161	./.	./.	./.	0/1:29,0:18:75.70:76,0,162	0/1:19,0:5:12.97:13,0,33	0/0:63,1:20:29.55:0,30,418	./.	0/0:53,0:9:14.19:0,14,137	0/1:56,1:16:14.76:15,0,387	0/0:19,0:6:3:0,3,29	0/1:54,15:23:99:226,0,119	1/1:22,9:16:20.10:310,20,0	0/1:31,5:11:63.10:138,0,63	0/0:64,0:13:11.40:0,11,172	0/1:71,1:12:10.89:11,0,187	0/0:48,0:15:11.53:0,12,91	0/1:53,1:24:24.18:24,0,305	0/0:13,0:1:3.01:0,3,67	0/1:29,4:11:32.80:33,0,70	0/0:74,1:18:12.48:0,12,275	0/1:26,8:15:3.41:75,0,3	0/1:10,1:5:35.68:36,0,105	0/1:85,7:16:0:0,0,0	1/1:14,3:4:2.97:20,3,0	0/1:29,1:10:65.38:65,0,137	0/1:30,8:21:37.58:38,0,102	0/1:10,0:7:39.41:39,0,56
chr10	36455258	.	CTGT	C	517.22	PASS	AB=0.983;AC=14;AF=0.304;AN=46;BaseQRankSum=2.674;DP=1116;FS=14.424;HRun=0;HaplotypeScore=77.4107;InbreedingCoeff=-0.2994;MQ=14.65;MQ0=420;MQRankSum=0.605;QD=1.08;ReadPosRankSum=0.556;VQSLOD=0.0876;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:40,0:13:10.91:11,0,161	./.	./.	./.	0/1:28,2:19:35.94:36,0,165	0/0:18,0:5:3.45:0,3,22	0/0:63,0:20:26.54:0,27,453	./.	0/0:56,1:12:3.57:0,4,185	0/0:58,0:15:9.96:0,10,444	0/0:17,0:5:3.01:0,3,40	0/1:71,0:24:99:135,0,151	1/1:31,0:16:21.03:214,21,0	0/1:37,0:12:72.77:73,0,96	0/0:65,0:14:12.03:0,12,166	0/0:73,0:16:7.16:0,7,228	0/1:52,0:19:3.07:3,0,20	0/1:54,1:24:9.17:9,0,266	0/0:16,0:1:3.01:0,3,66	0/1:34,0:11:9.97:10,0,154	0/0:72,0:18:12.51:0,13,265	0/1:34,0:15:12.56:13,0,49	0/1:12,0:5:14.74:15,0,165	0/0:91,0:16:2.80:0,3,13	./.	0/1:35,1:11:57.47:57,0,177	0/1:38,0:21:24.87:25,0,112	0/1:9,1:7:52.10:52,0,90
chr10	36455282	.	CTGT	C	278.51	PASS	AB=0.985;AC=12;AF=0.240;AN=50;BaseQRankSum=5.331;DP=1330;FS=8.638;HRun=0;HaplotypeScore=109.8422;InbreedingCoeff=-0.1028;MQ=16.03;MQ0=436;MQRankSum=-2.022;QD=0.52;ReadPosRankSum=2.126;VQSLOD=1.6347;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:53,0:23:9.17:9,0,248	0/0:19,0:8:10.56:0,11,97	./.	./.	0/0:41,0:25:18.11:0,18,355	0/0:20,0:4:3.01:0,3,64	0/0:81,1:21:24.04:0,24,381	./.	0/0:68,2:20:3.97:0,4,239	0/0:64,0:18:27.81:0,28,527	0/0:22,0:7:0.47:0,0,1	0/1:82,1:29:77.15:77,0,148	0/1:42,1:23:84.68:94,0,85	0/1:43,0:18:65.72:66,0,143	0/1:84,0:25:18.71:19,0,89	0/0:88,0:27:25.42:0,25,400	1/1:71,0:30:2.05:9,2,0	0/0:64,0:31:19.34:0,19,379	0/0:23,0:3:9.03:0,9,143	0/1:34,0:13:38.65:39,0,94	0/0:70,0:23:15.04:0,15,231	0/1:39,1:19:39.61:40,0,58	0/0:25,0:7:3.65:0,4,148	0/0:94,2:24:3.53:0,4,52	1/1:32,0:10:0.69:12,1,0	0/0:49,0:19:12.82:0,13,392	0/1:45,3:27:45.37:45,0,130	0/0:19,1:12:1.34:0,1,44
chr10	36455288	.	TTGTTGC	T	668.23	PASS	AB=0.989;AC=17;AF=0.340;AN=50;BaseQRankSum=2.160;DP=1415;FS=15.350;HRun=0;HaplotypeScore=127.5015;InbreedingCoeff=-0.4226;MQ=16.08;MQ0=462;MQRankSum=-1.168;QD=0.76;ReadPosRankSum=-1.961;VQSLOD=1.3363;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:60,0:24:39.37:39,0,265	0/1:20,0:8:14.54:15,0,32	./.	./.	0/1:39,2:26:18.99:19,0,311	0/0:25,0:4:3.01:0,3,47	0/0:87,0:23:23.80:0,24,336	./.	0/1:72,1:21:39.40:39,0,233	0/0:67,0:19:7.80:0,8,387	0/0:22,0:9:0.47:0,0,1	0/1:88,0:29:66.07:66,0,134	0/1:52,0:25:77.79:96,0,78	0/1:53,0:22:67.62:68,0,98	0/1:88,0:28:27.51:28,0,126	0/0:94,0:29:5.02:0,5,371	0/1:76,0:34:57.29:91,0,57	0/0:68,0:33:1.96:0,2,167	0/0:24,0:3:6.49:0,6,124	0/0:34,0:13:5.29:0,5,109	0/0:72,0:22:13.81:0,14,189	0/1:42,0:19:13.75:14,0,67	0/1:27,0:9:6.07:6,0,112	0/1:103,0:26:52.32:71,0,52	1/1:33,0:10:7.40:47,7,0	0/1:55,1:20:72.93:73,0,420	0/1:49,0:26:46.38:46,0,59	0/1:19,2:12:69.30:93,0,69
chr10	36455291	.	TTGC	T	876.07	PASS	AB=0.949;AC=17;AF=0.340;AN=50;BaseQRankSum=4.183;DP=1433;FS=17.666;HRun=0;HaplotypeScore=114.0739;InbreedingCoeff=-0.2403;MQ=16.05;MQ0=463;MQRankSum=-4.112;QD=1.10;ReadPosRankSum=1.472;VQSLOD=0.9319;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:24:19.95:0,20,250	0/0:17,2:8:11.85:0,12,85	./.	./.	0/0:41,0:26:4.35:0,4,287	0/0:29,0:4:3.01:0,3,55	0/0:89,0:22:23.72:0,24,295	./.	0/1:76,2:22:38.18:38,0,219	0/0:67,0:20:43.86:0,44,336	1/1:20,0:9:2.96:19,3,0	0/1:77,12:29:99:158,0,121	0/1:47,7:25:76.61:195,0,77	0/1:50,5:22:99:116,0,121	0/1:91,1:29:79.98:80,0,94	0/0:96,1:29:29.60:0,30,417	0/1:78,1:35:36.06:36,0,84	0/1:66,0:32:0.89:1,0,283	0/0:21,0:3:9.01:0,9,147	0/1:30,3:13:32.77:117,0,33	0/0:69,2:22:14.87:0,15,165	0/1:35,6:19:60.53:61,0,76	0/1:29,0:9:33.22:33,0,109	0/0:106,2:27:7.59:0,8,79	1/1:29,2:10:8.81:72,9,0	0/1:58,0:19:16.99:17,0,361	0/1:45,5:26:67.11:67,0,100	0/1:22,0:12:14.55:15,0,53
chr10	36455294	.	CTGT	C	673.82	PASS	AB=0.976;AC=16;AF=0.320;AN=50;BaseQRankSum=2.875;DP=1446;FS=14.838;HRun=0;HaplotypeScore=114.0143;InbreedingCoeff=-0.2243;MQ=15.99;MQ0=463;MQRankSum=-1.948;QD=0.83;ReadPosRankSum=0.942;VQSLOD=1.5523;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:24:0.74:0,1,190	0/0:20,0:8:6.19:0,6,33	./.	./.	0/0:40,0:25:13.34:0,13,226	0/0:31,0:4:5.98:0,6,58	0/0:88,1:21:17.53:0,18,228	./.	0/1:80,1:22:49.07:49,0,235	0/0:66,0:20:10.91:0,11,354	1/1:20,1:9:3.01:37,3,0	0/1:84,2:28:72.37:107,0,72	0/1:55,0:25:93.50:96,0,94	0/1:56,1:23:55.98:56,0,142	0/1:94,0:30:18.45:18,0,94	0/0:96,2:30:27.99:0,28,361	0/0:79,0:35:7.04:0,7,132	0/1:66,1:34:0.28:0,0,160	0/0:21,0:3:8.76:0,9,119	0/1:29,4:13:22.67:159,0,23	0/0:71,0:22:5.24:0,5,82	0/1:39,2:18:62.03:83,0,62	0/1:30,1:11:39.83:40,0,58	0/1:114,0:29:5.26:5,0,72	1/1:29,2:10:8.86:104,9,0	0/1:54,1:19:44.93:45,0,370	0/1:47,1:26:15.26:15,0,130	0/0:22,0:12:0.91:0,1,86
chr10	36455300	.	TTGC	T	513.22	PASS	AB=0.991;AC=20;AF=0.400;AN=50;BaseQRankSum=4.602;DP=1426;FS=9.829;HRun=0;HaplotypeScore=113.0641;InbreedingCoeff=-0.2573;MQ=16.01;MQ0=466;MQRankSum=-2.350;QD=0.53;ReadPosRankSum=-2.530;VQSLOD=0.8674;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:55,1:26:9.46:9,0,207	0/0:23,0:9:9.38:0,9,72	./.	./.	0/1:38,0:24:34.59:35,0,200	0/0:32,0:5:5.95:0,6,50	0/1:86,2:20:3.27:3,0,113	./.	0/1:80,0:22:6.92:7,0,188	0/1:63,0:18:6.53:7,0,272	1/1:22,0:8:2.96:19,3,0	0/1:85,0:27:47.61:61,0,48	0/1:55,0:23:24.62:25,0,61	0/1:53,2:23:31.97:32,0,229	0/1:87,1:27:22.18:22,0,60	0/0:99,0:30:30.70:0,31,296	0/0:79,2:36:14.81:0,15,183	0/1:66,0:34:71.44:72,0,71	0/0:21,0:3:8.98:0,9,113	1/1:32,1:13:2.71:122,3,0	0/0:73,2:20:5.87:0,6,57	0/1:40,0:17:62.11:82,0,62	0/1:25,0:10:51.33:56,0,51	0/1:112,0:31:5:5,0,70	1/1:32,0:10:9:80,9,0	0/0:55,0:19:2.88:0,3,416	0/0:46,1:25:8.08:0,8,149	0/1:23,1:13:22.94:23,0,91
chr10	36455303	.	CTGT	C	98.46	PASS	AB=0.980;AC=12;AF=0.240;AN=50;BaseQRankSum=4.943;DP=1397;FS=9.138;HRun=0;HaplotypeScore=113.1480;InbreedingCoeff=0.0565;MQ=16.00;MQ0=455;MQRankSum=-2.292;QD=0.17;ReadPosRankSum=-0.013;VQSLOD=1.3516;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:27:30.19:0,30,264	0/0:25,0:9:14.96:0,15,176	./.	./.	0/0:39,0:25:12.83:0,13,263	0/0:32,0:5:3.01:0,3,51	0/0:88,0:20:1.85:0,2,36	./.	0/0:77,0:21:11.04:0,11,235	0/0:62,0:16:17.40:0,17,225	0/0:19,0:8:0:0,0,0	0/1:78,2:26:3.13:3,0,47	0/1:52,2:22:25.51:26,0,125	0/1:49,2:21:9.26:9,0,309	0/1:81,4:26:26.29:26,0,119	0/0:94,3:29:26.81:0,27,360	0/0:82,0:38:17.78:0,18,200	0/1:61,1:30:55.85:56,0,109	0/0:19,0:4:8.52:0,9,105	1/1:33,1:14:7.58:28,8,0	0/0:73,1:20:5.96:0,6,55	0/1:40,0:16:21.56:22,0,97	0/1:24,0:10:12.19:12,0,58	0/1:109,0:28:1.81:2,0,126	1/1:31,0:10:7.44:50,7,0	0/0:54,0:19:35.37:0,35,480	0/0:47,1:25:18.04:0,18,205	0/0:24,0:13:7.27:0,7,104
chr10	36455330	.	TTGC	T	263.07	PASS	AB=0.988;AC=15;AF=0.313;AN=48;BaseQRankSum=3.724;DP=1226;FS=10.607;HRun=0;HaplotypeScore=82.8192;InbreedingCoeff=-0.3457;MQ=15.23;MQ0=446;MQRankSum=-0.781;QD=0.37;ReadPosRankSum=-2.056;VQSLOD=0.1565;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:46,3:22:67.54:68,0,340	0/0:22,0:7:15.04:0,15,262	./.	./.	0/1:36,1:26:8.73:9,0,337	0/0:32,0:4:3.01:0,3,67	1/1:78,0:14:2.97:20,3,0	./.	0/1:62,0:17:27.26:27,0,108	0/1:65,1:8:50.31:50,0,264	./.	0/1:61,0:14:17.81:18,0,75	0/0:49,1:16:12.04:0,12,194	0/1:46,0:18:13.45:13,0,336	0/1:69,0:25:36.27:36,0,195	0/0:74,0:24:23.70:0,24,372	0/0:74,0:33:8.15:0,8,302	0/1:43,0:21:44.90:45,0,182	0/1:20,1:4:43.98:44,0,60	0/0:28,0:10:8.84:0,9,129	0/0:56,0:11:1.29:0,1,53	0/1:38,0:12:34.57:35,0,84	0/0:22,0:10:7:0,7,81	0/1:77,1:26:5.39:5,0,149	0/1:25,0:8:9.22:22,0,9	0/0:54,0:18:24.24:0,24,510	0/1:42,0:16:7.12:7,0,140	0/0:29,0:11:3.01:0,3,66
chr10	36455333	.	CTGT	C	103.24	PASS	AB=0.981;AC=11;AF=0.239;AN=46;BaseQRankSum=3.066;DP=1216;FS=1.428;HRun=0;HaplotypeScore=80.0203;InbreedingCoeff=-0.2005;MQ=15.12;MQ0=455;MQRankSum=-2.887;QD=0.22;ReadPosRankSum=-0.082;VQSLOD=1.2788;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:47,0:20:32.64:33,0,316	0/0:23,1:7:18.01:0,18,238	./.	./.	0/1:37,0:26:26.55:27,0,302	0/0:34,0:5:3.01:0,3,62	./.	./.	0/0:59,0:16:10.54:0,11,158	0/1:68,1:8:25.49:25,0,156	./.	0/1:55,0:12:35.66:36,0,81	0/0:49,1:16:12.04:0,12,205	0/0:45,1:18:3.38:0,3,262	0/1:67,3:26:16.04:16,0,232	0/0:70,1:23:20.87:0,21,355	0/0:70,2:33:21.43:0,21,256	0/1:39,4:20:7.74:8,0,143	0/1:20,0:4:24.03:24,0,40	0/0:27,0:8:11.90:0,12,132	0/0:57,0:11:5.81:0,6,51	0/1:37,0:12:23.22:23,0,60	0/0:23,0:9:6.49:0,6,79	0/0:72,1:25:10.93:0,11,153	1/1:24,1:8:3.48:37,3,0	0/1:54,1:17:3.21:3,0,361	0/0:39,2:15:5.91:0,6,112	0/0:28,1:11:3.01:0,3,45
chr10	36455486	.	CTGT	C	116.87	PASS	AB=0.955;AC=8;AF=0.200;AN=40;BaseQRankSum=2.085;DP=897;FS=9.250;HRun=0;HaplotypeScore=40.0553;InbreedingCoeff=0.2534;MQ=13.49;MQ0=341;MQRankSum=-0.009;QD=0.49;ReadPosRankSum=2.286;VQSLOD=-0.4439;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:5:5.84:0,6,34	0/0:12,0:1:3.01:0,3,31	./.	./.	0/0:30,0:13:8.95:0,9,93	./.	./.	./.	0/1:42,3:11:17.49:17,0,117	0/0:56,0:7:15.05:0,15,220	./.	0/0:36,2:8:2.90:0,3,16	0/1:34,3:10:0:0,0,0	1/1:30,6:15:9.03:135,9,0	0/0:44,3:10:3.01:0,3,36	1/1:44,3:7:3.01:45,3,0	0/1:44,2:15:17.83:18,0,105	0/0:28,2:11:14.72:0,15,154	0/0:22,0:7:15.05:0,15,315	0/0:21,1:13:28.67:0,29,297	0/0:48,0:7:0:0,0,0	0/1:26,0:6:14.56:15,0,106	0/0:22,0:9:21.06:0,21,271	0/0:71,5:27:12.04:0,12,221	0/0:14,0:6:8.96:0,9,100	0/0:50,0:13:23.58:0,24,278	./.	./.
chr10	36455528	.	TTGC	T	106.17	PASS	AB=0.936;AC=10;AF=0.217;AN=46;BaseQRankSum=0.322;DP=865;FS=21.162;HRun=0;HaplotypeScore=54.8297;InbreedingCoeff=-0.0325;MQ=14.91;MQ0=288;MQRankSum=-0.804;QD=0.40;ReadPosRankSum=-2.860;VQSLOD=-0.7535;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:15:24.08:0,24,491	./.	./.	./.	1/1:25,0:9:2.04:6,2,0	0/0:22,0:8:11.50:0,11,238	0/0:54,0:5:6.02:0,6,125	./.	0/0:54,0:21:14:0,14,600	0/0:31,0:6:13.45:0,13,199	./.	0/0:22,3:6:6.02:0,6,133	0/0:29,2:12:2.48:0,2,51	0/1:30,1:10:29.03:29,0,60	0/1:37,0:11:40.53:41,0,45	0/0:44,3:10:12.04:0,12,207	0/1:68,1:33:9.30:9,0,689	0/0:37,0:18:4.18:0,4,270	0/0:23,0:7:11.94:0,12,113	0/1:22,1:7:53.10:53,0,140	0/0:61,0:20:24.49:0,24,550	0/1:12,5:10:67.41:67,0,124	0/0:16,1:6:8.86:0,9,102	0/1:49,4:21:8.39:16,0,8	1/1:10,0:4:0.89:2,1,0	0/0:48,0:8:7.21:0,7,114	0/0:37,2:14:15.05:0,15,343	0/0:8,0:2:3.01:0,3,62
chr10	36455543	.	T	TTGC	168.58	PASS	AB=0.975;AC=8;AF=0.167;AN=48;BaseQRankSum=-0.752;DP=829;FS=1.465;HRun=0;HaplotypeScore=51.5224;InbreedingCoeff=0.1249;MQ=14.65;MQ0=284;MQRankSum=0.118;QD=0.90;ReadPosRankSum=-0.280;VQSLOD=1.5324;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:15:4.95:0,5,151	1/1:9,0:2:1.82:5,2,0	./.	./.	0/0:25,0:8:0.47:0,0,1	0/0:24,0:6:8.98:0,9,74	0/0:51,0:3:6.02:0,6,101	./.	0/0:51,0:21:13.59:0,14,188	0/0:34,0:6:15.41:0,15,131	./.	0/0:23,0:5:5.98:0,6,53	0/1:28,1:10:14.48:63,0,14	0/0:31,0:9:3.01:0,3,51	0/1:32,1:12:41.34:62,0,41	0/1:42,1:9:57.11:57,0,81	0/1:65,1:34:27.02:27,0,322	0/0:36,1:19:20.46:0,20,176	0/0:26,0:4:5.96:0,6,44	0/0:17,0:6:11.88:0,12,84	0/0:59,0:22:23.42:0,23,233	0/0:16,0:7:14.87:0,15,155	0/0:17,0:5:8.94:0,9,90	0/0:42,1:16:8.87:0,9,83	0/0:12,0:5:1.25:0,1,3	0/0:45,0:9:2.85:0,3,96	0/0:39,0:15:14.99:0,15,127	1/1:6,1:2:3.01:69,3,0
chr10	36455654	.	TTGC	T	101.94	PASS	AB=0.974;AC=9;AF=0.188;AN=48;BaseQRankSum=1.161;DP=621;FS=1.221;HRun=0;HaplotypeScore=32.1099;InbreedingCoeff=0.1782;MQ=15.48;MQ0=201;MQRankSum=-0.284;QD=0.52;ReadPosRankSum=-1.746;VQSLOD=0.7437;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/0:13,0:6:9.03:0,9,141	0/0:6,0:2:2.98:0,3,22	0/0:12,0:6:11.86:0,12,92	0/0:14,0:3:4.50:0,4,16	0/0:19,0:5:5.85:0,6,80	0/0:35,0:6:5.85:0,6,74	0/0:36,0:3:6.02:0,6,117	0/0:27,0:4:9.03:0,9,137	0/1:25,0:8:31.39:31,0,35	./.	./.	0/0:13,0:9:5.91:0,6,45	1/1:17,2:12:6.02:86,6,0	0/0:39,0:14:6.02:0,6,107	1/1:46,0:12:8.64:52,9,0	0/0:39,0:19:11.23:0,11,392	0/1:32,0:19:6.75:7,0,206	./.	0/0:8,0:4:5.55:0,6,28	0/0:43,1:12:9.03:0,9,159	0/0:20,0:4:2.88:0,3,18	0/0:15,3:3:2.94:0,3,18	0/1:23,3:14:7.99:10,0,8	0/1:12,0:3:0:0,0,0	0/0:20,0:6:9:0,9,130	0/1:34,1:21:35.60:36,0,177	0/0:12,0:8:0.47:0,0,1
chr10	36455725	.	G	GC	112.62	PASS	AB=0.923;AC=9;AF=0.180;AN=50;BaseQRankSum=1.135;DP=1567;FS=33.316;HRun=0;HaplotypeScore=100.8479;InbreedingCoeff=0.0188;MQ=16.58;MQ0=482;MQRankSum=-0.317;QD=0.19;ReadPosRankSum=2.612;VQSLOD=0.2313;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:16:11.94:0,12,124	0/0:25,1:12:12.04:0,12,167	./.	./.	0/0:49,0:13:17.93:0,18,186	0/0:47,0:17:27.44:0,27,312	0/1:105,8:31:33.13:33,0,258	0/0:60,0:4:8.92:0,9,80	0/0:70,0:32:62.72:0,63,633	0/0:95,0:22:53.63:0,54,650	0/0:37,0:12:6.02:0,6,83	1/1:49,7:15:11.31:63,11,0	0/1:50,8:22:55.30:55,0,192	0/1:73,9:39:15.66:16,0,259	0/1:73,4:30:13.64:14,0,366	0/0:130,0:53:83.19:0,83,781	0/0:85,0:39:47.71:0,48,516	0/1:70,3:38:9.03:9,0,373	0/0:34,0:11:15.05:0,15,209	0/0:34,0:10:12.04:0,12,167	0/0:70,0:25:17.36:0,17,188	0/0:42,0:6:5.98:0,6,61	0/0:38,0:9:1.25:0,1,3	0/1:75,10:42:43.77:44,0,100	0/0:33,0:7:9.03:0,9,125	0/0:56,0:19:23.89:0,24,265	0/1:46,3:32:13.94:14,0,218	./.
chr10	36455726	.	T	TGC	472.02	PASS	AB=0.946;AC=12;AF=0.231;AN=52;BaseQRankSum=-1.343;DP=1571;FS=41.113;HRun=0;HaplotypeScore=107.1023;InbreedingCoeff=-0.0703;MQ=16.65;MQ0=482;MQRankSum=-1.005;QD=0.65;ReadPosRankSum=1.811;VQSLOD=-0.0611;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:16:11.69:0,12,135	0/0:26,0:13:12.04:0,12,190	./.	./.	0/0:49,0:13:17.90:0,18,211	0/0:47,0:17:27.08:0,27,336	0/1:102,8:31:93.20:93,0,251	0/1:59,0:4:10.98:11,0,64	0/0:70,0:32:62.68:0,63,684	0/0:95,0:22:49.92:0,50,709	0/0:37,0:12:6.02:0,6,97	1/1:50,7:16:12:114,12,0	0/1:50,8:22:99:107,0,220	0/1:73,9:39:54.26:54,0,276	0/1:73,4:31:52.05:52,0,431	0/0:131,0:55:83.82:0,84,917	0/0:85,0:40:47.88:0,48,571	0/1:70,3:38:34.94:35,0,416	0/0:33,0:12:15.05:0,15,243	0/0:36,0:10:12.04:0,12,194	0/0:72,0:25:19.46:0,19,237	0/0:42,0:6:3.90:0,4,50	0/0:38,0:9:2.94:0,3,18	0/1:75,10:42:91.69:92,0,125	0/0:33,0:7:9.03:0,9,146	0/1:57,0:20:13.96:14,0,235	0/1:45,3:31:42.56:43,0,236	0/1:13,0:5:0:0,0,0
chr10	36455780	.	T	TTGC	74.74	PASS	AB=0.981;AC=10;AF=0.217;AN=46;BaseQRankSum=-0.049;DP=1142;FS=9.607;HRun=0;HaplotypeScore=73.6725;InbreedingCoeff=-0.0157;MQ=15.14;MQ0=385;MQRankSum=-0.719;QD=0.19;ReadPosRankSum=1.637;VQSLOD=0.5456;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:7:5.98:0,6,55	0/1:20,2:11:24.14:24,0,78	./.	./.	./.	0/0:36,0:8:14.74:0,15,104	1/1:58,0:8:7.95:44,8,0	0/0:52,0:11:23.93:0,24,259	0/1:40,0:13:19.14:19,0,73	0/0:70,0:14:5.34:0,5,196	./.	0/0:45,0:17:6.96:0,7,51	0/0:44,0:13:13.04:0,13,143	0/0:62,0:29:23.64:0,24,233	0/1:62,3:31:35.01:35,0,85	0/1:72,2:27:3.73:4,0,86	0/1:52,0:25:57.40:57,0,82	0/0:50,0:12:3.01:0,3,50	0/1:18,0:6:10.07:10,0,76	0/1:22,0:3:0:0,0,0	0/0:63,0:29:3.81:0,4,182	0/0:43,0:10:17.99:0,18,237	0/0:36,0:9:7.40:0,7,38	0/0:59,0:28:25.88:0,26,238	0/0:33,0:6:11.91:0,12,159	0/0:52,0:8:5.95:0,6,42	0/1:43,0:25:1.17:1,0,279	./.
chr10	36455783	.	T	TTGC	238.48	PASS	AB=0.987;AC=12;AF=0.261;AN=46;BaseQRankSum=0.394;DP=1086;FS=6.539;HRun=0;HaplotypeScore=71.9052;InbreedingCoeff=-0.0964;MQ=14.98;MQ0=372;MQRankSum=-0.660;QD=0.49;ReadPosRankSum=1.167;VQSLOD=0.8995;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:7:8.93:0,9,75	0/1:21,0:10:1.32:1,0,81	./.	./.	./.	0/1:32,0:7:8.37:8,0,47	0/1:58,0:6:9.27:47,0,9	0/0:49,0:10:17.97:0,18,199	0/1:39,0:12:2.48:2,0,46	0/0:65,0:13:20.39:0,20,222	1/1:28,0:10:2.68:11,3,0	0/0:44,0:17:17.36:0,17,99	0/0:41,0:12:13.87:0,14,159	0/0:57,0:27:20.73:0,21,219	0/1:62,3:31:68.85:69,0,69	0/1:70,0:23:9.47:9,0,21	0/1:47,1:25:86.81:128,0,87	0/0:44,0:8:2.91:0,3,50	0/0:17,0:6:3.85:0,4,50	0/1:21,0:3:0:0,0,0	0/1:57,1:25:45.64:46,0,150	0/0:41,0:9:20.92:0,21,257	0/0:35,0:9:8.65:0,9,46	0/0:55,0:27:28.61:0,29,287	0/0:34,0:6:11.83:0,12,156	./.	0/1:40,2:25:38.36:38,0,261	./.
chr10	36455804	.	TTGTTGC	T	225.13	PASS	AB=0.994;AC=19;AF=0.432;AN=44;BaseQRankSum=-0.051;DP=788;FS=13.342;HRun=0;HaplotypeScore=47.8397;InbreedingCoeff=-0.2551;MQ=14.47;MQ0=267;MQRankSum=-0.487;QD=0.43;ReadPosRankSum=0.692;VQSLOD=0.2473;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:6:6.90:0,7,33	1/1:11,0:5:1.36:3,1,0	./.	./.	0/0:20,0:3:2.74:0,3,12	0/1:25,0:5:9.14:9,0,38	1/1:54,0:6:3.35:16,3,0	0/1:35,0:10:42.14:42,0,67	1/1:27,0:3:2.04:6,2,0	0/1:42,0:8:1.36:1,0,140	./.	0/1:31,0:12:19.71:20,0,40	0/1:27,0:7:6.92:7,0,34	0/1:34,2:19:10.05:129,0,10	0/1:46,0:25:3.53:4,0,133	0/0:51,0:9:2.88:0,3,15	0/1:31,1:17:34.76:35,0,63	0/1:36,0:10:0:0,0,0	0/1:15,0:4:1.90:2,0,53	0/0:11,0:2:3.01:0,3,35	0/0:35,0:13:11.46:0,11,111	0/1:37,0:9:20.06:20,0,176	./.	0/1:32,0:15:27.21:41,0,27	0/0:20,0:3:2.80:0,3,13	./.	0/1:31,0:19:8.93:9,0,42	./.
chr10	36455819	.	TTGTTGC	T	97.47	PASS	AB=0.978;AC=12;AF=0.286;AN=42;BaseQRankSum=1.537;DP=696;FS=11.433;HRun=0;HaplotypeScore=40.1093;InbreedingCoeff=0.0020;MQ=14.05;MQ0=240;MQRankSum=-1.732;QD=0.37;ReadPosRankSum=-1.047;VQSLOD=-0.0252;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:7:9.03:0,9,186	1/1:7,0:1:0.47:1,0,0	./.	./.	0/0:18,0:4:2.92:0,3,17	0/1:17,0:4:0:0,0,0	0/1:44,0:5:16.47:16,0,66	0/1:32,1:9:41.87:42,0,212	1/1:25,0:3:2.04:6,2,0	0/0:45,0:7:15.03:0,15,379	./.	0/1:27,0:10:4.31:4,0,6	0/0:26,0:7:8.89:0,9,90	0/1:29,0:17:15.62:58,0,16	0/0:41,0:25:2.34:0,2,266	0/0:48,0:10:3.01:0,3,52	0/0:28,0:11:11.38:0,11,109	0/1:37,0:11:0:0,0,0	0/1:14,3:6:44.29:49,0,44	0/0:7,0:1:3.01:0,3,37	./.	0/0:29,0:7:11.84:0,12,199	./.	0/1:25,0:10:26.70:27,0,65	./.	0/0:30,0:3:0:0,0,0	0/0:26,0:15:18.02:0,18,212	./.
chr10	36455822	.	TTGC	T	31.94	PASS	AB=0.984;AC=11;AF=0.262;AN=42;BaseQRankSum=2.236;DP=689;FS=13.445;HRun=0;HaplotypeScore=36.2492;InbreedingCoeff=-0.0505;MQ=14.05;MQ0=241;MQRankSum=0.579;QD=0.13;ReadPosRankSum=-1.826;VQSLOD=-0.3959;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:7:9.03:0,9,163	1/1:6,0:1:0.47:1,0,0	./.	./.	0/0:19,0:4:2.92:0,3,17	0/0:16,0:3:0.47:0,0,1	0/1:44,0:6:12.02:12,0,29	0/1:33,0:9:22.15:22,0,82	0/0:23,0:3:1.25:0,1,3	0/0:44,0:7:15.05:0,15,288	./.	0/1:25,2:10:9.04:9,0,21	0/0:23,0:7:8.89:0,9,88	1/1:26,1:16:0.91:39,1,0	0/0:38,3:25:1.18:0,1,120	0/0:48,2:12:3.01:0,3,41	0/1:27,0:11:8.20:8,0,53	0/1:37,0:11:0:0,0,0	0/1:20,1:7:33.70:34,0,67	0/0:7,0:1:2.96:0,3,19	./.	0/0:31,0:7:11.64:0,12,142	./.	0/1:23,0:10:13.77:14,0,47	./.	0/0:28,0:3:2.68:0,3,11	0/0:26,1:16:16.41:0,16,210	./.
chr10	36455846	.	TTGC	T	55.41	PASS	AB=0.963;AC=15;AF=0.395;AN=38;BaseQRankSum=4.046;DP=658;FS=0.000;HRun=0;HaplotypeScore=36.4292;InbreedingCoeff=0.0213;MQ=13.99;MQ0=253;MQRankSum=-0.708;QD=0.20;ReadPosRankSum=-0.020;VQSLOD=0.6067;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:5:9.02:0,9,95	1/1:7,0:1:0.47:1,0,0	1/1:3,0:1:2.94:18,3,0	./.	./.	./.	./.	0/0:31,0:4:10.87:0,11,62	0/0:18,2:2:3.01:0,3,35	0/0:40,0:6:12.03:0,12,192	./.	1/1:27,0:11:2.69:15,3,0	1/1:20,1:9:1.39:4,1,0	0/1:27,1:17:0.01:0,0,0	0/1:38,1:23:7.31:7,0,234	0/1:48,5:13:6.04:6,0,62	0/1:20,1:9:27.70:34,0,28	0/1:37,1:12:12.11:12,0,13	0/0:23,0:10:17.28:0,17,122	./.	./.	0/0:28,0:8:12.03:0,12,137	0/0:18,1:3:3.01:0,3,33	0/1:21,1:9:25.89:28,0,26	./.	0/0:24,0:3:3.01:0,3,55	0/1:19,0:11:42.90:43,0,81	./.
chr10	36455849	.	CTGT	C	144.74	PASS	AB=0.942;AC=13;AF=0.361;AN=36;BaseQRankSum=3.330;DP=627;FS=2.978;HRun=0;HaplotypeScore=34.2848;InbreedingCoeff=0.0830;MQ=13.99;MQ0=244;MQRankSum=-0.939;QD=0.63;ReadPosRankSum=0.866;VQSLOD=1.2902;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:5:9:0,9,121	./.	1/1:3,0:1:2.99:23,3,0	./.	./.	./.	./.	0/0:29,0:4:2.90:0,3,16	0/0:17,0:2:3.01:0,3,39	0/0:38,0:5:9:0,9,117	./.	1/1:27,0:11:2.83:33,3,0	1/1:19,1:8:2.79:19,3,0	1/1:24,2:15:4.21:29,4,0	0/1:37,0:21:17.15:17,0,273	0/1:52,1:13:23.70:24,0,60	0/1:18,0:8:2.26:2,0,15	0/0:39,0:13:4.53:0,5,25	0/0:22,0:9:12.03:0,12,153	./.	./.	0/0:23,0:7:11.97:0,12,135	0/0:19,0:3:3.01:0,3,35	0/1:19,1:8:9.21:35,0,9	./.	0/0:23,0:3:3.01:0,3,42	0/1:16,2:10:38.94:81,0,39	./.
chr10	36455855	.	TTGC	T	111.91	PASS	AB=0.922;AC=14;AF=0.333;AN=42;BaseQRankSum=3.160;DP=602;FS=0.000;HRun=0;HaplotypeScore=37.6458;InbreedingCoeff=0.1201;MQ=14.76;MQ0=229;MQRankSum=-1.547;QD=0.52;ReadPosRankSum=1.521;VQSLOD=0.8064;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:5:6.01:0,6,125	./.	1/1:5,0:1:2.60:10,3,0	./.	./.	0/0:13,0:4:2.94:0,3,18	./.	0/0:26,0:2:2.99:0,3,23	0/0:16,0:3:2.38:0,2,23	0/0:34,0:5:3.01:0,3,68	./.	1/1:26,1:8:2.76:18,3,0	1/1:18,0:7:0.31:1,0,0	0/0:23,2:15:4.75:0,5,24	0/1:39,2:24:56.44:56,0,214	0/1:50,4:13:44.66:45,0,60	1/1:18,1:9:2.99:24,3,0	0/0:36,0:13:7.84:0,8,42	0/0:19,0:6:11.79:0,12,98	./.	0/0:25,0:4:0:0,0,0	0/0:22,0:7:6.02:0,6,96	0/0:18,0:4:2.94:0,3,18	0/1:20,4:10:2.86:18,0,3	./.	0/0:20,0:1:2.97:0,3,20	0/1:16,1:10:21.10:50,0,21	1/1:9,0:4:0.47:1,0,0
chr10	36455867	.	TTGC	T	320.28	PASS	AB=0.957;AC=18;AF=0.474;AN=38;BaseQRankSum=2.904;DP=520;FS=17.863;HRun=0;HaplotypeScore=37.8065;InbreedingCoeff=0.2118;MQ=16.45;MQ0=193;MQRankSum=-1.077;QD=1.27;ReadPosRankSum=-0.174;VQSLOD=-0.1759;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:4:8.94:0,9,94	./.	0/0:8,0:1:3.01:0,3,34	./.	./.	0/0:9,0:3:3.01:0,3,53	./.	0/0:17,0:1:3.01:0,3,62	0/0:11,0:3:1.87:0,2,8	0/0:25,0:3:3.01:0,3,44	./.	0/1:26,0:10:9.12:9,0,29	1/1:20,1:9:4.02:21,4,0	1/1:26,1:17:14.27:77,14,0	0/1:30,5:24:99:111,0,154	0/1:46,0:15:6.32:6,0,59	1/1:14,1:7:5.96:44,6,0	0/0:29,0:10:6.79:0,7,57	1/1:15,0:5:1.55:4,2,0	./.	1/1:26,0:10:5.18:27,5,0	0/0:16,0:4:3.01:0,3,69	./.	0/1:20,1:10:17.87:32,0,18	./.	./.	1/1:12,0:7:11.50:87,12,0	1/1:8,1:4:3.01:30,3,0
chr10	36455873	.	TTGCTGTTGCTGTTGTTGCTGC	T	2597.61	PASS	AB=0.939;AC=33;AF=0.717;AN=46;BaseQRankSum=-2.213;DP=494;FS=17.394;HRun=0;HaplotypeScore=67.5934;InbreedingCoeff=0.0074;MQ=19.84;MQ0=157;MQRankSum=1.845;QD=6.68;ReadPosRankSum=-1.779;VQSLOD=0.0159;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:5:1.25:3,1,0	0/0:6,0:3:0.47:0,0,1	0/0:11,0:1:2.90:0,3,16	./.	1/1:16,0:7:6.02:97,6,0	0/1:8,0:5:30.85:62,0,31	1/1:21,0:4:3.01:49,3,0	0/1:16,0:3:49.85:65,0,50	1/1:11,0:4:6.02:100,6,0	./.	./.	0/1:23,0:12:25.04:35,0,25	1/1:22,0:11:5.75:137,6,0	1/1:26,0:18:18.06:411,18,0	0/1:34,0:26:99:502,0,122	0/1:46,0:16:20.36:114,0,20	1/1:14,0:10:7.25:137,7,0	1/1:24,0:11:7.49:50,7,0	1/1:8,4:4:8.93:79,9,0	./.	0/1:23,0:12:6.23:235,0,6	0/0:16,0:6:3.01:0,3,62	0/1:9,5:5:0:0,0,0	1/1:23,0:15:5.24:299,5,0	./.	1/1:9,0:2:3.01:41,3,0	1/1:13,0:9:15.05:262,15,0	1/1:6,0:3:3.01:46,3,0
chr10	36455879	.	TTGC	T	1847.73	PASS	AB=0.938;AC=32;AF=0.696;AN=46;BaseQRankSum=-1.526;DP=486;FS=0.000;HRun=0;HaplotypeScore=43.5032;InbreedingCoeff=-0.0228;MQ=22.15;MQ0=135;MQRankSum=1.101;QD=5.02;ReadPosRankSum=-2.463;VQSLOD=1.1072;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:4:0.34:0,0,8	0/1:6,0:3:0:0,0,0	0/0:12,0:1:0:0,0,0	./.	1/1:18,0:9:8.99:76,9,0	0/1:7,0:6:22.25:22,0,38	1/1:21,0:6:9.02:89,9,0	0/1:14,1:4:29.09:64,0,29	1/1:11,0:6:7.57:69,8,0	1/1:17,0:4:5.70:29,6,0	./.	0/0:27,0:13:5.50:0,6,41	1/1:12,10:11:5.85:82,6,0	1/1:28,5:23:29.95:355,30,0	0/1:21,14:26:43.44:293,0,43	0/1:39,3:17:41.70:42,0,45	1/1:12,6:12:7.34:66,7,0	0/1:26,0:13:19.65:46,0,20	1/1:11,0:4:5.93:40,6,0	./.	0/1:21,2:12:11.82:115,0,12	0/1:13,0:7:12.02:12,0,65	./.	1/1:22,5:19:20.97:256,21,0	./.	1/1:10,0:4:5.88:36,6,0	1/1:5,6:8:15.05:253,15,0	1/1:1,1:1:3.01:31,3,0
chr10	36455888	.	TTGCTGC	T	995.91	PASS	AB=0.953;AC=32;AF=0.615;AN=52;BaseQRankSum=1.692;DP=523;FS=1.428;HRun=0;HaplotypeScore=64.2171;InbreedingCoeff=-0.1846;MQ=26.39;MQ0=108;MQRankSum=-1.058;QD=2.25;ReadPosRankSum=1.904;VQSLOD=1.0367;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:8:4.56:41,5,0	1/1:4,0:3:2.80:13,3,0	0/1:14,0:2:11.67:12,0,19	0/0:31,0:5:12.04:0,12,255	1/1:22,0:13:11.28:63,11,0	0/1:8,0:6:11.72:12,0,50	1/1:24,0:16:0.34:32,0,0	0/0:17,0:11:22.03:0,22,149	1/1:15,0:10:8.41:46,8,0	0/1:17,0:5:1.12:30,0,1	1/1:8,0:3:5.77:33,6,0	0/1:15,13:15:40.99:149,0,41	0/1:22,0:12:16.40:23,0,16	0/1:31,1:23:29.27:29,0,88	0/1:37,1:28:99:241,0,112	0/1:47,0:25:10.92:133,0,11	0/1:15,2:12:13.68:36,0,14	0/1:22,1:14:3.24:21,0,3	0/1:8,0:4:6.10:6,0,26	./.	0/1:27,0:17:53.78:55,0,54	0/0:12,0:9:6.06:0,6,76	1/1:15,0:7:0.94:2,1,0	0/1:31,0:24:25.96:26,0,86	./.	1/1:8,0:6:10.71:67,11,0	0/1:13,0:11:11.44:12,0,11	1/1:3,0:2:5.97:65,6,0
chr10	36455894	.	C	CTGT	4520.75	PASS	AB=0.884;AC=46;AF=0.852;AN=54;BaseQRankSum=-3.310;DP=576;FS=9.882;HRun=0;HaplotypeScore=56.6691;InbreedingCoeff=0.0528;MQ=29.44;MQ0=93;MQRankSum=1.701;QD=8.47;ReadPosRankSum=-0.869;VQSLOD=2.4635;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:6,7:9:0:0,0,0	1/1:6,0:5:6.46:50,6,0	1/1:19,0:5:0.97:9,1,0	0/0:36,0:7:15.04:0,15,185	1/1:12,13:19:12.04:235,12,0	0/1:5,3:8:30.22:55,0,30	1/1:8,15:19:12.04:224,12,0	0/1:17,0:12:56.07:56,0,90	1/1:3,13:13:9.03:162,9,0	1/1:12,7:14:27.01:329,27,0	1/1:11,0:6:8.99:90,9,0	0/1:28,0:15:24.35:60,0,24	1/1:25,0:17:14.28:147,14,0	1/1:35,0:25:32.05:280,32,0	1/1:42,1:32:0.15:700,0,0	1/1:48,0:30:1.09:490,1,0	1/1:19,0:15:24.01:333,24,0	1/1:11,9:15:9:147,9,0	1/1:10,0:5:8.89:59,9,0	1/1:18,0:11:5.95:42,6,0	0/1:27,0:19:20.55:188,0,21	0/1:17,0:13:29.04:29,0,59	1/1:13,0:7:5.92:39,6,0	1/1:32,0:24:26.54:272,27,0	./.	1/1:10,1:10:5.10:270,5,0	1/1:16,0:13:19.31:148,19,0	1/1:3,0:2:6.02:106,6,0
chr10	36456589	.	ATTGTTCT	A	7771.75	PASS	AB=0.537;AC=11;AF=0.196;AN=56;BaseQRankSum=17.039;DP=765;FS=8.269;HRun=0;HaplotypeScore=209.0303;InbreedingCoeff=0.8792;MQ=83.27;MQ0=0;MQRankSum=-16.236;QD=55.91;ReadPosRankSum=2.368;VQSLOD=4.0941;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,126,5026	0/0:8,0:8:24.08:0,24,1007	0/0:27,0:27:80.75:0,81,2808	0/0:22,0:22:63.19:0,63,2249	1/1:0,32:30:80.64:1453,81,0	0/0:24,0:24:72.25:0,72,3002	0/0:32,0:32:96.32:0,96,3891	0/0:35,0:35:99:0,105,4152	1/1:6,20:26:78.18:1445,78,0	0/0:45,0:45:99:0,135,5444	0/0:24,0:24:69.24:0,69,2812	0/0:22,0:22:66.23:0,66,2404	0/0:17,0:17:51.18:0,51,2086	0/0:31,0:31:93.31:0,93,3798	0/0:42,0:42:99:0,126,4771	1/1:1,34:35:99:2245,105,0	1/1:0,12:12:30.06:589,30,0	0/0:14,0:14:42.11:0,42,1658	0/0:20,0:20:60.21:0,60,2498	0/0:32,0:32:90.31:0,90,3653	0/0:48,0:48:99:0,144,5683	0/0:37,0:37:99:0,102,3786	0/0:19,0:19:54.11:0,54,1800	0/0:34,0:34:99:0,102,3905	0/0:18,0:18:48.16:0,48,1975	0/1:4,25:29:38.72:1763,0,39	0/0:33,0:33:99:0,99,3895	1/1:0,4:4:12.04:276,12,0
chr10	36456597	.	AGCTT	A	4693.65	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=16.818;DP=739;FS=10.056;HRun=0;HaplotypeScore=168.7151;InbreedingCoeff=0.9399;MQ=82.91;MQ0=0;MQRankSum=-16.065;QD=36.38;ReadPosRankSum=3.409;VQSLOD=4.4822;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,126,3443	0/0:9,0:9:27.09:0,27,755	0/0:23,0:23:69.23:0,69,1791	0/0:24,0:24:69.24:0,69,1854	1/1:3,27:28:60.19:840,60,0	0/0:25,0:25:69.24:0,69,1926	0/0:35,0:35:99:0,105,2803	0/0:36,0:36:99:0,108,2888	1/1:0,20:20:57.06:808,57,0	0/0:41,0:41:99:0,123,3324	0/0:26,0:26:72.23:0,72,1921	0/0:18,0:18:51.16:0,51,1367	0/0:16,0:16:48.16:0,48,1326	0/0:31,0:31:87.26:0,87,2273	0/0:34,0:34:99:0,99,2691	1/1:1,34:35:99:1415,100,0	1/1:0,12:11:26.57:350,27,0	0/0:16,0:16:48.16:0,48,1282	0/0:22,0:22:66.23:0,66,1813	0/0:33,0:33:96.32:0,96,2599	0/0:45,0:45:99:0,129,3608	0/0:34,0:34:90.31:0,90,2436	0/0:19,0:19:48.16:0,48,1254	0/0:31,0:31:93.32:0,93,2602	0/0:19,0:19:45.15:0,45,1256	1/1:1,27:28:0.26:1100,0,0	0/0:31,0:31:93.29:0,93,2446	1/1:0,4:4:12.04:180,12,0
chr10	36458060	.	CCTTCCTTT	C	19446.70	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=4.722;DP=606;FS=9.459;HRun=0;HaplotypeScore=195.7622;InbreedingCoeff=0.8305;MQ=64.92;MQ0=1;MQRankSum=-6.503;QD=35.36;ReadPosRankSum=5.918;VQSLOD=3.1314;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,16:27:27.09:695,27,0	1/1:10,8:18:21.07:544,21,0	0/0:21,0:19:27.09:0,27,957	0/0:23,0:19:33.07:0,33,1075	1/1:16,15:31:27.09:611,27,0	1/1:11,21:32:54.19:1342,54,0	1/1:12,16:28:33.11:851,33,0	1/1:13,8:21:24.08:541,24,0	1/1:8,11:19:24.08:621,24,0	1/1:9,22:31:63.22:1606,63,0	1/1:5,13:18:24.08:604,24,0	1/1:3,12:15:30.10:774,30,0	1/1:3,13:16:33.11:854,33,0	1/1:7,12:19:30.10:728,30,0	1/1:8,21:29:48.16:1209,48,0	1/1:7,13:20:33.11:854,33,0	1/1:8,12:20:21.07:544,21,0	1/1:12,5:17:9.03:233,9,0	1/1:12,9:20:27.09:640,27,0	1/1:7,12:19:39.09:951,39,0	0/0:10,2:12:2.49:0,2,6	1/1:12,13:25:27.09:677,27,0	1/1:9,13:22:27.09:699,27,0	1/1:7,7:14:1.25:71,1,0	1/1:8,8:16:18.02:406,18,0	1/1:10,17:27:54.15:1261,54,0	1/1:6,18:24:42.14:1045,42,0	1/1:6,15:21:42.14:1087,42,0
chr10	36458081	.	CTTTCTTCA	C	13595.16	PASS	AB=0.991;AC=28;AF=0.500;AN=56;BaseQRankSum=16.112;DP=514;FS=34.845;HRun=0;HaplotypeScore=170.5332;InbreedingCoeff=-0.5925;MQ=61.68;MQ0=1;MQRankSum=-13.981;QD=29.95;ReadPosRankSum=16.454;VQSLOD=1.1798;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:29:99:470,0,200	0/1:12,0:12:66.89:385,0,67	0/0:23,0:20:60.14:0,60,1429	0/0:24,0:20:60.08:0,60,1545	0/1:19,0:19:99:400,0,134	0/1:25,1:26:72.78:971,0,73	0/1:22,0:22:99:595,0,101	0/1:21,0:21:99:294,0,272	1/1:12,0:12:1.09:452,1,0	0/1:30,0:30:99:1093,0,135	0/1:15,0:15:77.85:440,0,78	0/1:14,0:14:7.88:556,0,8	0/1:19,0:19:99:605,0,100	0/1:15,0:15:14.88:531,0,15	0/1:27,0:27:92.76:852,0,93	1/1:13,0:13:33.11:655,33,0	0/1:17,0:17:87.87:375,0,88	0/1:13,0:13:99:143,0,141	0/1:13,0:12:33.92:411,0,34	1/1:13,1:14:14.61:727,15,0	0/0:13,0:13:30.69:0,31,188	0/1:17,0:17:76.84:477,0,77	0/1:15,0:15:27.87:506,0,28	0/1:14,0:14:27.11:27,0,144	0/1:14,2:16:99:307,0,133	0/1:21,1:22:52.38:838,0,52	0/1:21,0:21:36.90:721,0,37	0/1:18,0:18:23.82:764,0,24
chr10	36458339	.	GT	G	22034.86	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=4.978;DP=737;FS=1.067;HRun=3;HaplotypeScore=103.0795;InbreedingCoeff=0.9993;MQ=63.24;MQ0=9;MQRankSum=0.811;QD=33.09;ReadPosRankSum=7.393;VQSLOD=3.9391;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,55:55:99:1820,147,0	1/1:0,19:18:54.17:668,54,0	0/0:35,0:31:84.23:0,84,1115	0/0:36,0:32:87.08:0,87,1187	1/1:1,37:37:99:1336,108,0	1/1:1,26:27:69.22:854,69,0	1/1:0,27:27:72.23:891,72,0	1/1:2,28:29:78.20:947,78,0	1/1:0,20:20:48.15:595,48,0	1/1:1,34:34:99:1229,102,0	1/1:0,17:17:39.12:483,39,0	1/1:0,22:22:54.17:669,54,0	1/1:1,12:13:27.08:333,27,0	1/1:1,14:15:42.13:520,42,0	1/1:0,25:25:69.22:854,69,0	1/1:0,17:16:45.14:557,45,0	1/1:3,22:23:66.21:818,66,0	1/1:0,18:18:54.17:668,54,0	1/1:2,19:19:47.82:566,48,0	1/1:0,22:22:66.17:800,66,0	1/1:1,46:46:99:1597,129,0	1/1:3,23:24:66.21:816,66,0	1/1:0,22:22:63.20:779,63,0	1/1:1,35:36:90.28:1116,90,0	1/1:0,14:14:36.11:446,36,0	1/1:0,25:25:75.24:929,75,0	1/1:1,29:30:87.27:1076,87,0	1/1:1,18:19:53.27:665,53,0
chr10	36458501	.	AT	A	9170.64	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-3.639;DP=547;FS=28.308;HRun=2;HaplotypeScore=72.3621;InbreedingCoeff=0.9071;MQ=83.46;MQ0=0;MQRankSum=-7.296;QD=18.75;ReadPosRankSum=3.407;VQSLOD=3.4943;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:40,0:40:80.66:622,81,0	1/1:0,9:9:5.79:76,6,0	0/0:30,0:24:58.15:0,58,645	0/0:28,0:26:42.56:0,43,544	1/1:3,15:18:50.81:510,51,0	1/1:28,0:29:56.76:436,57,0	1/1:27,0:27:50.83:395,51,0	1/1:1,11:12:33:346,33,0	1/1:1,13:14:30.10:386,30,0	1/1:24,0:25:71.88:596,72,0	1/1:20,0:21:35.82:272,36,0	1/1:0,11:11:15.05:193,15,0	1/1:1,12:13:21.05:254,21,0	1/1:1,17:18:29.93:355,30,0	1/1:25,0:25:50.87:401,51,0	1/1:0,18:18:30.10:386,30,0	1/1:3,22:25:42.07:492,42,0	1/1:19,1:20:41.84:337,42,0	1/1:5,4:9:27.01:280,27,0	1/1:2,13:15:32.61:249,33,0	1/1:2,17:19:21.07:270,21,0	1/1:1,18:19:27:307,27,0	1/1:2,9:11:12.02:139,12,0	1/1:1,24:25:42.12:523,42,0	1/1:2,12:16:16.58:207,17,0	1/1:3,17:20:53.97:557,54,0	1/1:0,17:17:32.84:391,33,0	1/1:0,13:13:15.05:191,15,0
chr10	36458502	.	TTC	T	7765.38	PASS	AB=0.972;AC=47;AF=0.839;AN=56;BaseQRankSum=-1.688;DP=550;FS=9.615;HRun=0;HaplotypeScore=86.2597;InbreedingCoeff=0.3868;MQ=85.22;MQ0=0;MQRankSum=-6.871;QD=15.91;ReadPosRankSum=6.639;VQSLOD=3.9082;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,40:40:81.28:1286,81,0	0/1:10,0:10:5.01:5,0,16	0/0:32,0:26:69.02:0,69,898	0/0:29,0:27:47.77:0,48,738	1/1:15,3:18:30.44:251,30,0	1/1:1,26:28:57.19:885,57,0	1/1:1,25:26:50.68:813,51,0	1/1:11,0:11:17.78:103,18,0	1/1:13,0:13:22.58:69,23,0	1/1:1,24:25:72.18:1038,72,0	1/1:1,20:21:36.07:542,36,0	1/1:11,0:11:10.92:33,11,0	1/1:12,1:13:12.82:39,13,0	0/1:18,1:19:1.49:44,0,1	1/1:0,24:24:51.17:820,51,0	1/1:18,0:18:22.02:66,22,0	1/1:23,2:26:11.37:171,11,0	1/1:1,19:20:41.17:624,41,0	0/1:9,1:10:6.67:111,0,7	1/1:14,1:15:17.72:200,18,0	1/1:19,0:19:1.46:56,1,0	1/1:20,0:20:10.41:47,10,0	1/1:9,1:10:9.67:68,10,0	1/1:24,1:25:30.37:132,30,0	0/1:15,0:15:2.48:33,0,2	1/1:17,2:19:35.69:267,36,0	0/1:19,0:19:30.93:32,0,31	1/1:13,0:13:10.70:32,11,0
chr10	36462164	.	T	TGGATGGGAAACTGGGAAAGG	91817.21	PASS	AC=50;AF=0.926;AN=54;BaseQRankSum=-3.873;DP=563;FS=1.417;HRun=0;HaplotypeScore=248.8527;InbreedingCoeff=0.9984;MQ=48.37;MQ0=1;MQRankSum=-9.677;QD=178.63;ReadPosRankSum=5.933;VQSLOD=4.8764;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:17,5:26:60.21:4180,60,0	1/1:6,6:12:33.11:2800,33,0	0/0:29,0:27:72.23:0,72,2857	0/0:19,0:19:45.15:0,45,1558	1/1:15,8:26:66.18:4268,66,0	1/1:15,7:22:63.22:4438,63,0	1/1:23,2:26:69.24:4728,69,0	1/1:19,0:14:33.10:1704,33,0	1/1:17,8:26:75.26:5305,75,0	1/1:14,4:21:60.21:4368,60,0	1/1:12,6:20:48.16:3535,48,0	1/1:13,6:19:54.19:3606,54,0	1/1:13,5:19:54.19:3963,54,0	1/1:16,5:22:63.22:4227,63,0	1/1:14,6:22:57.20:4196,57,0	1/1:10,3:14:39.13:2870,39,0	1/1:12,2:15:39.13:2722,39,0	1/1:11,2:17:41.77:2938,42,0	1/1:17,2:19:45.15:2724,45,0	1/1:11,7:18:54.19:4331,54,0	1/1:16,3:23:33.11:2434,33,0	1/1:16,6:24:60.21:4168,60,0	1/1:10,4:17:42.02:2824,42,0	1/1:10,1:13:24.08:1426,24,0	1/1:11,7:22:45.15:3711,45,0	1/1:16,11:29:87.30:7085,87,0	1/1:17,2:19:45.15:3266,45,0	./.
chr10	36462547	.	T	TC	14466.43	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=6.003;DP=688;FS=1.387;HRun=4;HaplotypeScore=201.8747;InbreedingCoeff=0.9991;MQ=71.52;MQ0=0;MQRankSum=-7.891;QD=22.43;ReadPosRankSum=3.414;VQSLOD=3.5344;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:18,29:47:99:910,103,0	1/1:4,7:11:29.18:252,29,0	0/0:20,0:20:42.11:0,42,469	0/0:22,0:23:49.93:0,50,588	1/1:11,12:23:39.82:398,40,0	1/1:13,11:24:65.19:604,65,0	1/1:21,7:28:70.25:675,70,0	1/1:12,14:26:68.59:620,69,0	1/1:10,6:16:38.38:356,38,0	1/1:7,18:25:62.47:575,62,0	1/1:8,8:16:37.55:311,38,0	1/1:18,10:28:70.30:697,70,0	1/1:9,9:18:52.88:476,53,0	1/1:15,15:30:72.87:642,73,0	1/1:13,16:29:74.09:724,74,0	1/1:6,10:17:35.91:378,36,0	1/1:21,18:39:77.54:809,78,0	1/1:7,15:22:50.81:501,51,0	1/1:10,12:22:53.97:577,54,0	1/1:4,9:13:29.08:249,29,0	1/1:15,26:41:95.96:1072,96,0	1/1:12,18:30:68.54:604,69,0	1/1:8,19:27:58.10:523,58,0	1/1:8,17:25:50.96:511,51,0	1/1:12,10:22:49.33:430,49,0	1/1:16,11:27:71.78:741,72,0	1/1:12,9:20:47.09:381,47,0	1/1:7,11:18:40.27:449,40,0
chr10	36462553	.	GA	G	16569.08	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=6.340;DP=683;FS=1.172;HRun=1;HaplotypeScore=204.7368;InbreedingCoeff=0.9992;MQ=77.23;MQ0=0;MQRankSum=-10.074;QD=26.13;ReadPosRankSum=6.088;VQSLOD=4.4943;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:13,33:46:99:1094,108,0	1/1:4,7:11:29.82:294,30,0	0/0:22,0:22:63.14:0,63,925	0/0:27,0:27:75.40:0,75,1093	1/1:9,13:22:38.34:475,38,0	1/1:9,13:22:61.76:624,62,0	1/1:17,11:28:77.49:830,77,0	1/1:11,18:29:86.77:876,87,0	1/1:9,6:15:38.61:373,39,0	1/1:4,18:22:59.65:570,60,0	1/1:7,8:15:44.61:445,45,0	1/1:15,10:25:67.56:686,68,0	1/1:9,11:20:59.37:622,59,0	1/1:13,17:30:75.65:721,76,0	1/1:15,16:31:77.43:779,77,0	1/1:6,11:17:35.97:392,36,0	1/1:16,22:38:90.27:985,90,0	1/1:5,17:22:56.86:579,57,0	1/1:9,13:22:54.49:598,54,0	1/1:4,9:13:28.72:291,29,0	1/1:15,27:42:99:1099,99,0	1/1:6,22:28:70.31:722,70,0	1/1:5,23:28:56.37:578,56,0	1/1:7,19:26:50.84:555,51,0	1/1:7,13:20:50.74:595,51,0	1/1:12,14:26:71.91:824,72,0	1/1:6,12:18:50.63:499,51,0	1/1:7,11:18:40.97:464,41,0
chr10	36462593	.	CT	C	24550.74	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=0.363;DP=698;FS=0.684;HRun=1;HaplotypeScore=154.6443;InbreedingCoeff=0.9994;MQ=73.10;MQ0=0;MQRankSum=-8.754;QD=37.03;ReadPosRankSum=5.702;VQSLOD=4.1815;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,50:51:99:1635,123,0	1/1:0,10:10:27.09:376,27,0	0/0:17,0:17:45.05:0,45,573	0/0:18,0:17:41.25:0,41,548	1/1:0,27:27:75.09:1043,75,0	1/1:0,20:20:54.18:752,54,0	1/1:0,28:28:78.26:1076,78,0	1/1:0,29:29:84.27:1152,84,0	1/1:0,17:17:45.15:627,45,0	1/1:0,23:23:69.22:939,69,0	1/1:0,18:18:51.17:710,51,0	1/1:0,23:23:54.18:751,54,0	1/1:0,18:18:54.18:750,54,0	1/1:0,26:26:63.21:870,63,0	1/1:0,29:29:72.24:1002,72,0	1/1:0,22:22:48.16:669,48,0	1/1:1,40:41:99:1576,114,0	1/1:1,27:28:78.26:1087,78,0	1/1:0,25:25:75.22:1020,75,0	1/1:0,19:19:51.17:708,51,0	1/1:1,40:41:99:1502,108,0	1/1:0,26:26:66.22:912,66,0	1/1:0,30:30:84.28:1162,84,0	1/1:0,27:27:66.05:881,66,0	1/1:0,17:17:50.96:680,51,0	1/1:0,26:26:78.23:1044,78,0	1/1:0,17:17:48.16:664,48,0	1/1:0,25:25:69.23:962,69,0
chr10	36463789	.	A	AG	28178.97	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-5.154;DP=678;FS=10.918;HRun=1;HaplotypeScore=78.1025;InbreedingCoeff=0.9988;MQ=81.96;MQ0=0;MQRankSum=-9.948;QD=43.82;ReadPosRankSum=5.230;VQSLOD=3.7272;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,28:28:81.28:1295,81,0	1/1:0,15:15:45.15:719,45,0	0/0:22,0:22:66.11:0,66,825	0/0:13,0:13:39.09:0,39,517	1/1:0,36:36:99:1582,99,0	1/1:0,20:20:51.17:815,51,0	1/1:1,24:25:69.24:1103,69,0	1/1:1,19:20:60.19:929,60,0	1/1:1,22:23:63.21:1007,63,0	1/1:2,27:29:84.29:1331,84,0	1/1:0,28:28:75.26:1199,75,0	1/1:1,23:24:60.20:959,60,0	1/1:1,24:25:66.23:1055,66,0	1/1:0,21:21:60.20:959,60,0	1/1:0,41:41:99:1822,114,0	1/1:0,22:21:66.23:1055,66,0	1/1:1,20:21:57.18:888,57,0	1/1:1,13:14:33.11:527,33,0	1/1:0,19:19:57.19:890,57,0	1/1:1,45:46:99:1965,123,0	1/1:0,31:31:84.29:1343,84,0	1/1:1,22:23:60.20:959,60,0	1/1:1,24:25:60.20:959,60,0	1/1:0,20:20:57.19:911,57,0	1/1:1,16:18:51.17:796,51,0	1/1:0,27:27:78.27:1248,78,0	1/1:1,32:34:93.32:1478,93,0	1/1:0,8:8:24.08:383,24,0
chr10	36467716	.	GGA	G	3689.67	PASS	AB=0.853;AC=43;AF=0.827;AN=52;BaseQRankSum=-3.262;DP=388;FS=0.000;HRun=0;HaplotypeScore=50.6919;InbreedingCoeff=0.0392;MQ=48.78;MQ0=104;MQRankSum=3.232;QD=10.54;ReadPosRankSum=2.589;VQSLOD=2.9390;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,13:16:21.07:283,21,0	./.	0/1:24,0:9:3.79:4,0,121	0/0:32,1:12:13.37:0,13,108	0/1:7,1:7:26.05:51,0,26	0/1:5,5:9:13.41:224,0,13	1/1:11,2:8:21.04:253,21,0	0/1:17,0:11:0.20:112,0,0	1/1:9,1:8:8.98:87,9,0	1/1:15,3:6:9:90,9,0	1/1:1,1:2:3.01:41,3,0	1/1:5,2:6:11.11:162,11,0	./.	0/1:10,2:6:62.88:146,0,63	1/1:5,7:7:3.01:36,3,0	1/1:15,2:15:12.82:245,13,0	1/1:18,2:13:17.99:185,18,0	1/1:14,7:16:2.81:413,3,0	1/1:8,5:5:12.04:164,12,0	1/1:6,0:4:2.63:41,3,0	1/1:25,18:25:30.10:412,30,0	1/1:2,3:4:3.01:41,3,0	1/1:3,5:6:9.03:124,9,0	1/1:10,10:17:12.98:167,13,0	0/1:7,6:12:4.54:74,0,5	1/1:14,3:11:26.65:240,27,0	1/1:2,1:3:5.06:61,5,0	0/1:6,1:3:2.43:35,0,2
chr10	36472072	.	C	CT	1782.89	PASS	AB=0.957;AC=16;AF=0.286;AN=56;BaseQRankSum=-8.054;DP=479;FS=2.870;HRun=11;HaplotypeScore=95.0492;InbreedingCoeff=0.6664;MQ=68.45;MQ0=2;MQRankSum=-1.854;QD=10.25;ReadPosRankSum=-1.295;VQSLOD=2.9720;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:56.33:0,56,579	0/0:6,0:6:14.61:0,15,104	0/1:16,0:10:0.54:1,0,53	0/1:16,0:9:8.06:8,0,66	1/1:9,13:22:23.90:267,24,0	0/0:27,0:27:62.66:0,63,481	0/0:13,0:13:32.82:0,33,251	0/1:29,2:30:7.14:7,0,317	1/1:0,6:6:18.04:183,18,0	0/0:22,0:23:37.85:0,38,284	0/0:14,0:14:38.85:0,39,302	0/0:14,0:15:34.88:0,35,259	0/0:19,0:20:46.83:0,47,351	0/0:11,0:11:23.85:0,24,180	0/0:22,0:22:33.54:0,34,334	1/1:3,14:17:29.93:304,30,0	1/1:5,23:28:33.87:524,34,0	0/0:18,0:19:40.80:0,41,302	0/0:19,0:19:44.76:0,45,344	0/0:17,0:17:44.81:0,45,345	0/1:7,1:8:9.55:10,0,116	0/0:10,0:10:3.93:0,4,102	0/0:11,0:11:21.80:0,22,164	0/0:8,0:9:12.65:0,13,127	0/0:19,0:20:52.81:0,53,401	1/1:1,9:10:6.79:240,7,0	0/0:18,0:20:51.89:0,52,383	1/1:0,16:18:44.76:424,45,0
chr10	36473084	.	T	TGAA	37970.74	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-8.923;DP=748;FS=9.993;HRun=0;HaplotypeScore=94.6101;InbreedingCoeff=0.9971;MQ=86.99;MQ0=0;MQRankSum=-11.525;QD=55.03;ReadPosRankSum=7.133;VQSLOD=6.6701;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,40:47:99:2470,117,0	1/1:1,9:10:27.09:603,27,0	0/0:33,0:33:84.07:0,84,1334	0/0:25,0:25:58.69:0,59,880	1/1:2,21:23:54.19:1204,54,0	1/1:3,15:18:39.13:870,39,0	1/1:4,22:26:63.17:1333,63,0	1/1:11,30:44:99:2250,108,0	1/1:1,28:29:81.28:1807,81,0	1/1:4,35:41:99:2486,114,0	1/1:3,17:21:45.15:1002,45,0	1/1:2,19:21:51.18:1138,51,0	1/1:2,21:23:66.18:1423,66,0	1/1:2,19:21:60.16:1263,60,0	1/1:6,27:35:75.21:1626,75,0	1/1:4,23:27:60.21:1324,60,0	1/1:3,33:37:93.32:2068,93,0	1/1:4,20:24:60.21:1340,60,0	1/1:5,16:23:60.19:1245,60,0	1/1:2,38:40:99:2488,117,0	1/1:1,23:26:63.22:1392,63,0	1/1:1,23:24:69.24:1526,69,0	1/1:2,21:22:57.20:1272,57,0	1/1:5,13:18:30.07:624,30,0	1/1:5,25:30:75.26:1671,75,0	1/1:2,25:27:78.27:1715,78,0	1/1:4,21:25:63.17:1360,63,0	1/1:0,7:7:21.07:469,21,0
chr10	36473702	.	T	TCA	7209.03	PASS	AB=0.951;AC=15;AF=0.268;AN=56;BaseQRankSum=-10.592;DP=957;FS=0.679;HRun=0;HaplotypeScore=137.9079;InbreedingCoeff=0.8621;MQ=64.61;MQ0=5;MQRankSum=-0.941;QD=26.60;ReadPosRankSum=-1.355;VQSLOD=5.1063;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:12,42:53:90.31:1468,90,0	0/0:14,0:14:33.05:0,33,385	0/0:53,0:31:52.47:0,52,607	0/0:55,0:34:41.87:0,42,533	0/0:22,0:23:54:0,54,642	1/1:2,23:25:56.84:925,57,0	1/1:8,30:38:60.20:978,60,0	0/0:38,0:38:72.22:0,72,885	0/0:34,0:34:90.25:0,90,1078	1/1:9,27:36:84.29:1349,84,0	1/1:2,12:18:0.68:499,1,0	0/0:37,0:39:92.96:0,93,1098	0/0:36,0:36:87.23:0,87,1034	0/0:30,0:30:78.21:0,78,932	1/1:6,32:38:10.47:1196,10,0	0/0:42,0:43:99:0,117,1416	0/0:32,0:32:87.25:0,87,1054	1/1:3,20:23:48.16:783,48,0	0/0:23,0:24:57.01:0,57,678	0/0:20,0:20:51.16:0,51,627	0/0:87,0:87:99:0,217,2655	0/0:24,0:24:60.19:0,60,738	0/0:20,0:20:54.17:0,54,664	0/0:41,0:41:84.22:0,84,1015	0/0:28,0:28:75.21:0,75,909	0/1:37,2:39:11.11:11,0,865	0/0:22,0:23:41.96:0,42,491	0/0:19,0:22:26.74:0,27,463
chr10	36473792	.	CAG	C	306.51	PASS	AB=0.801;AC=3;AF=0.054;AN=56;BaseQRankSum=10.249;DP=996;FS=3.896;HRun=0;HaplotypeScore=321.7932;InbreedingCoeff=-0.0678;MQ=66.24;MQ0=8;MQRankSum=-5.570;QD=3.88;ReadPosRankSum=-6.004;VQSLOD=1.3353;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:44,2:46:86.69:0,87,1437	0/1:9,6:15:52.72:53,0,329	0/0:65,0:36:60.77:0,61,922	0/0:79,0:43:42.40:0,42,816	0/0:26,9:35:68.01:0,68,1186	0/0:25,10:35:51.03:0,51,866	0/0:38,2:40:13.13:0,13,1208	0/0:41,0:41:99:0,108,1788	0/0:23,4:27:28.48:0,28,948	0/1:28,10:37:99:285,0,941	0/0:24,6:30:47.85:0,48,830	0/0:29,8:38:16.08:0,16,823	0/0:27,7:34:1.41:0,1,940	0/0:23,5:28:14.64:0,15,694	0/0:42,8:50:94.56:0,95,1658	0/0:25,10:35:30.55:0,31,1038	0/0:21,0:21:54.18:0,54,915	0/0:27,2:29:69.05:0,69,1056	0/0:18,1:19:17.39:0,17,875	0/0:24,7:31:44.61:0,45,778	0/0:52,2:54:99:0,112,1940	0/0:25,8:33:56.32:0,56,961	0/0:33,3:36:60.15:0,60,1015	0/0:22,3:25:44.73:0,45,772	0/0:21,3:24:51.15:0,51,878	0/1:23,3:26:68.21:68,0,866	0/0:34,6:40:38.52:0,39,1559	0/0:18,2:20:19.08:0,19,785
chr10	36473832	.	G	GAC	22179.18	PASS	AB=0.797;AC=50;AF=0.893;AN=56;BaseQRankSum=-2.630;DP=1077;FS=5.874;HRun=0;HaplotypeScore=380.2136;InbreedingCoeff=0.5819;MQ=49.40;MQ0=27;MQRankSum=3.612;QD=24.48;ReadPosRankSum=1.717;VQSLOD=4.1300;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:28,7:35:33.10:492,33,0	1/1:11,3:14:36.11:510,36,0	0/0:62,0:25:52:0,52,464	0/0:109,0:37:10.80:0,11,321	1/1:26,10:36:63.51:871,64,0	0/1:30,11:41:5.67:720,0,6	1/1:26,9:35:22.60:623,23,0	1/1:58,12:63:70.22:1493,70,0	1/1:18,9:26:70.35:931,70,0	1/1:34,7:39:23.20:684,23,0	1/1:18,11:29:1.67:427,2,0	1/1:29,15:44:75.09:1440,75,0	1/1:31,10:41:90.22:1273,90,0	1/1:20,11:30:54.02:776,54,0	1/1:39,13:52:63.93:1021,64,0	1/1:32,13:45:99:1502,109,0	1/1:24,5:29:26.90:334,27,0	1/1:12,9:21:43.69:612,44,0	0/1:19,6:23:67.96:524,0,68	1/1:29,9:38:84.17:1117,84,0	1/1:21,4:25:40.42:394,40,0	1/1:26,13:39:88.02:1257,88,0	1/1:7,26:33:44.75:804,45,0	1/1:20,6:26:32.87:396,33,0	1/1:27,8:34:59.92:799,60,0	1/1:30,9:39:99:1484,114,0	1/1:29,9:39:84.80:1239,85,0	1/1:13,3:15:41.93:456,42,0
chr10	36473847	.	A	AAG	16134.88	PASS	AB=0.758;AC=33;AF=0.589;AN=56;BaseQRankSum=2.594;DP=1029;FS=7.920;HRun=0;HaplotypeScore=385.0905;InbreedingCoeff=-0.4361;MQ=47.33;MQ0=25;MQRankSum=-3.880;QD=18.11;ReadPosRankSum=4.987;VQSLOD=4.0428;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:25,8:33:13.45:532,0,13	1/1:4,10:15:23.22:470,23,0	0/0:49,0:22:56.72:0,57,761	0/0:89,0:25:38.67:0,39,681	0/1:13,17:30:61.91:678,0,62	0/1:39,1:40:50.52:548,0,51	0/1:27,7:34:99:458,0,162	0/1:41,33:68:99:1371,0,587	0/1:15,12:27:99:443,0,112	1/1:35,3:36:7.89:741,8,0	0/1:29,3:32:99:423,0,109	0/1:19,23:43:25.63:740,0,26	0/1:13,29:45:71.68:981,0,72	1/1:15,16:30:13.81:598,14,0	0/1:51,1:52:11.15:930,0,11	1/1:14,30:45:10.63:1113,11,0	1/1:13,15:28:19.11:456,19,0	0/1:22,0:22:99:165,0,215	0/1:16,8:23:99:345,0,174	1/1:11,25:39:2.41:952,2,0	0/1:11,5:17:26.85:27,0,45	0/1:16,26:42:26.42:896,0,26	0/1:23,5:29:99:306,0,104	0/1:14,14:28:91.72:141,0,92	1/1:11,22:32:9.90:664,10,0	0/1:17,22:39:99:1130,0,142	0/1:15,20:35:99:694,0,180	0/1:10,4:13:55.76:333,0,56
chr10	36477890	.	ACTTC	A	3463.22	PASS	AB=0.816;AC=19;AF=0.339;AN=56;BaseQRankSum=11.786;DP=497;FS=45.706;HRun=0;HaplotypeScore=76.0152;InbreedingCoeff=-0.5282;MQ=39.14;MQ0=43;MQRankSum=-5.580;QD=9.95;ReadPosRankSum=-1.851;VQSLOD=0.5074;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,1:16:39.10:0,39,932	0/1:4,3:6:99:159,0,155	0/0:23,0:3:9.03:0,9,229	0/0:29,0:10:27.09:0,27,718	0/1:30,7:24:99:358,0,731	0/1:9,1:8:37.95:38,0,541	0/1:11,1:12:29.18:29,0,810	0/0:30,0:19:57.19:0,57,1518	0/1:9,4:13:99:185,0,684	0/1:18,9:16:99:516,0,463	0/1:14,4:13:99:213,0,470	0/0:14,4:14:39.11:0,39,958	0/1:16,3:15:77.25:77,0,934	0/1:11,5:12:88.36:88,0,803	0/1:14,2:16:76.42:76,0,1105	0/1:14,6:15:17.16:17,0,1139	0/1:11,3:13:89.97:90,0,584	0/0:11,0:11:30.02:0,30,753	0/1:10,1:8:38.32:38,0,536	0/1:17,7:20:99:374,0,751	0/0:5,0:5:15.05:0,15,381	0/1:26,3:15:99:149,0,597	0/1:16,8:20:99:440,0,651	0/0:11,1:10:14.96:0,15,364	0/1:12,7:17:99:375,0,704	0/1:13,3:12:94.61:95,0,648	0/1:11,4:11:99:145,0,560	0/0:3,0:3:6.02:0,6,170
chr10	36477937	.	A	AC	319.23	PASS	AB=1.000;AC=13;AF=0.271;AN=48;BaseQRankSum=0.315;DP=289;FS=3.191;HRun=0;HaplotypeScore=39.7481;InbreedingCoeff=0.5782;MQ=25.38;MQ0=25;MQRankSum=-2.451;QD=6.94;ReadPosRankSum=1.483;VQSLOD=3.2260;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,6:3:3.01:36,3,0	0/0:9,0:9:24.02:0,24,223	0/0:29,0:5:11.98:0,12,128	0/0:33,0:8:21.02:0,21,261	0/0:14,0:13:18.02:0,18,169	1/1:5,1:2:3.01:47,3,0	1/1:0,4:3:3.01:47,3,0	./.	0/0:8,0:2:3:0,3,29	1/1:8,5:6:12.04:188,12,0	1/1:0,6:3:3.01:47,3,0	0/0:9,0:7:12.01:0,12,118	0/0:17,0:7:6.01:0,6,58	0/0:12,0:6:3.01:0,3,30	./.	0/0:4,0:2:6.01:0,6,59	0/0:11,0:7:14.97:0,15,124	1/1:0,4:3:6.02:91,6,0	0/0:7,0:2:5.04:0,5,33	0/0:12,0:11:20.99:0,21,194	0/1:5,0:1:0:0,0,0	0/0:12,0:8:11.95:0,12,103	0/0:11,0:9:17.95:0,18,155	0/0:7,0:3:3:0,3,28	0/0:10,0:9:11.95:0,12,96	0/0:11,0:3:5.38:0,5,38	./.	./.
chr10	36478532	.	TGTACACACGCGCGCGCGCGCGCGC	T	8075.04	PASS	AC=48;AF=0.923;AN=52;BaseQRankSum=2.574;DP=384;FS=12.854;HRun=0;HaplotypeScore=200.6319;InbreedingCoeff=0.4692;MQ=71.54;MQ0=3;MQRankSum=-6.904;QD=23.27;ReadPosRankSum=2.451;VQSLOD=2.5790;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:23:9:221,9,0	./.	0/0:12,0:10:25.53:0,26,412	0/0:16,0:14:14.84:0,15,479	1/1:3,6:9:3.01:128,3,0	1/1:11,0:11:8.95:214,9,0	1/1:16,0:14:6:51,6,0	1/1:7,8:15:38.67:631,39,0	1/1:10,0:10:9:84,9,0	1/1:14,0:14:3.01:602,3,0	./.	1/1:18,0:18:6.02:342,6,0	1/1:19,0:19:18.04:764,18,0	1/1:15,0:15:15.02:412,15,0	1/1:22,0:22:18.01:313,18,0	1/1:17,0:16:5.08:141,5,0	1/1:17,0:17:11.93:232,12,0	1/1:9,0:9:8.99:342,9,0	1/1:1,8:9:26.99:851,27,0	1/1:14,0:14:14.96:247,15,0	1/1:22,0:22:8.96:68,9,0	1/1:15,0:15:3:25,3,0	1/1:12,0:12:3.01:160,3,0	1/1:19,0:19:3.01:184,3,0	1/1:17,0:17:9:221,9,0	1/1:14,0:14:35.86:946,36,0	1/1:5,0:5:14.97:380,15,0	1/1:5,0:4:9.03:520,9,0
chr10	36478533	.	GTACACACGCGCGCGCGCGCGCGCGCA	G	7590.40	PASS	AB=1.000;AC=46;AF=0.885;AN=52;BaseQRankSum=2.052;DP=378;FS=12.232;HRun=0;HaplotypeScore=207.7626;InbreedingCoeff=0.3432;MQ=70.51;MQ0=3;MQRankSum=-5.996;QD=22.19;ReadPosRankSum=2.477;VQSLOD=2.8397;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:23:9:221,9,0	./.	0/0:12,0:10:25.53:0,26,412	0/0:15,0:13:14.84:0,15,479	1/1:7,0:8:3.01:111,3,0	1/1:11,0:11:8.95:214,9,0	1/1:16,0:14:6:51,6,0	1/1:13,0:13:38.67:631,39,0	1/1:10,0:10:6.88:51,7,0	0/1:14,0:14:48.42:537,0,48	./.	1/1:1,17:18:6.02:361,6,0	1/1:15,0:18:18.51:675,19,0	1/1:12,0:15:15.02:342,15,0	1/1:19,0:20:18.01:264,18,0	0/1:17,0:16:12.04:127,0,12	1/1:18,0:18:11.93:232,12,0	1/1:8,0:8:8.99:316,9,0	1/1:9,0:9:26.99:832,27,0	1/1:14,0:14:14.96:227,15,0	1/1:23,0:22:8.96:68,9,0	1/1:15,0:15:3:25,3,0	1/1:0,12:12:3.01:192,3,0	1/1:0,18:18:3.01:216,3,0	1/1:17,0:17:9:240,9,0	1/1:14,0:14:17.92:831,18,0	1/1:4,0:5:14.96:310,15,0	1/1:5,0:4:9.03:518,9,0
chr10	36478539	.	ACGCGCGCGCGCGCGCGCG	A	7160.99	PASS	AB=0.850;AC=45;AF=0.938;AN=48;BaseQRankSum=4.876;DP=396;FS=27.942;HRun=0;HaplotypeScore=150.3241;InbreedingCoeff=-0.0691;MQ=64.90;MQ0=10;MQRankSum=-4.809;QD=20.12;ReadPosRankSum=4.204;VQSLOD=1.8777;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:9,22:30:3.01:154,3,0	./.	0/1:8,1:7:28.25:28,0,190	0/1:14,0:12:40.59:41,0,236	1/1:6,1:8:3.01:147,3,0	1/1:5,7:12:3.01:153,3,0	./.	1/1:8,0:8:9.01:335,9,0	1/1:2,6:9:3.01:88,3,0	1/1:3,10:14:24.53:766,25,0	./.	1/1:17,1:18:6.02:304,6,0	1/1:3,14:17:15.05:715,15,0	1/1:3,18:20:9.03:429,9,0	1/1:7,14:21:6.49:306,6,0	1/1:1,15:17:6.02:183,6,0	1/1:8,12:19:5.89:169,6,0	1/1:1,11:12:6.02:308,6,0	1/1:10,0:9:15.05:689,15,0	1/1:3,9:11:3.01:152,3,0	0/1:11,13:23:0:0,0,0	./.	1/1:13,0:12:3.01:150,3,0	1/1:19,0:18:3.01:128,3,0	1/1:4,12:16:3.01:152,3,0	1/1:6,10:15:22.32:876,22,0	1/1:3,6:8:9.03:422,9,0	1/1:1,4:4:9.03:464,9,0
chr10	36479353	.	C	CAAAA	3743.60	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-1.853;DP=574;FS=4.488;HRun=10;HaplotypeScore=120.7174;InbreedingCoeff=0.9769;MQ=83.73;MQ0=0;MQRankSum=-3.864;QD=26.55;ReadPosRankSum=-3.644;VQSLOD=1.2780;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:4,16:24:15.05:327,15,0	0/0:4,0:4:12.04:0,12,170	0/0:22,0:22:9.02:0,9,385	0/0:22,0:22:16.17:0,16,235	0/0:38,0:38:89.94:0,90,1189	1/1:1,12:20:42.14:857,42,0	1/1:11,6:17:36.07:600,36,0	0/0:31,0:32:61.21:0,61,813	0/0:18,0:18:45.07:0,45,617	1/1:3,10:18:38.94:595,39,0	1/1:4,10:18:29.94:440,30,0	0/0:19,0:19:39.02:0,39,516	0/0:21,0:21:54.05:0,54,717	0/0:17,0:17:45.08:0,45,615	1/1:5,15:24:24:494,24,0	0/0:20,0:21:61.43:0,61,828	0/0:21,0:24:53.40:0,53,638	1/1:2,11:19:21.03:431,21,0	0/0:18,0:20:41.92:0,42,538	0/0:38,0:39:90.99:0,91,1250	0/0:12,0:12:26.98:0,27,350	0/0:14,0:14:33.08:0,33,467	0/0:20,0:21:44.99:0,45,592	0/0:14,0:14:39.13:0,39,532	0/0:22,0:22:41.96:0,42,559	0/0:29,0:29:72.09:0,72,997	0/0:15,0:15:45.12:0,45,598	0/0:7,0:8:24.06:0,24,321
chr10	36479806	.	A	AGCAGAGTAT	58920.07	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-2.921;DP=752;FS=11.337;HRun=0;HaplotypeScore=218.4633;InbreedingCoeff=0.9453;MQ=65.40;MQ0=0;MQRankSum=-10.392;QD=82.99;ReadPosRankSum=5.711;VQSLOD=3.8287;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:12,27:43:65.96:2906,66,0	1/1:2,8:11:24.08:1071,24,0	0/0:20,0:20:60.16:0,60,1548	0/0:22,0:22:63.16:0,63,1686	1/1:6,15:27:20.20:974,20,0	1/1:9,14:25:66.23:3083,66,0	1/1:12,19:47:66.23:2975,66,0	1/1:20,7:34:99:3814,99,0	1/1:5,8:20:36.12:1753,36,0	1/1:8,16:28:84.26:3483,84,0	1/1:4,13:22:32.10:1512,32,0	1/1:5,27:35:72.20:3335,72,0	1/1:6,23:36:75.17:3400,75,0	1/1:6,25:44:72.25:3415,72,0	1/1:3,14:25:42.14:2023,42,0	1/1:5,21:29:66.23:3056,66,0	1/1:5,8:17:21.07:1025,21,0	1/1:2,8:15:24.08:1173,24,0	1/1:8,14:30:78.17:3057,78,0	1/1:6,23:40:69.18:3018,69,0	1/1:7,3:15:11.35:568,11,0	1/1:4,19:29:59.33:2768,59,0	1/1:4,21:30:50.02:2385,50,0	1/1:8,7:17:21.07:964,21,0	1/1:6,15:22:51.18:2374,51,0	1/1:9,14:27:69.07:2473,69,0	1/1:5,12:28:42.14:1875,42,0	1/1:3,4:8:9.03:440,9,0
chr10	36480471	.	T	TCA	7316.76	PASS	AB=0.606;AC=49;AF=0.875;AN=56;BaseQRankSum=-2.300;DP=494;FS=9.412;HRun=0;HaplotypeScore=173.7822;InbreedingCoeff=0.3837;MQ=57.25;MQ0=12;MQRankSum=-0.374;QD=17.67;ReadPosRankSum=2.016;VQSLOD=4.6133;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,18:23:11.55:197,12,0	1/1:3,3:6:7.27:102,7,0	0/0:41,0:13:7.75:0,8,72	0/0:38,0:11:6:0,6,61	0/1:5,9:14:20.30:44,0,20	1/1:6,8:14:9.03:145,9,0	1/1:8,6:14:9.03:143,9,0	1/1:6,13:19:45.15:743,45,0	1/1:4,8:12:14.65:245,15,0	1/1:4,14:18:45.15:741,45,0	0/1:4,10:14:0:0,0,0	1/1:8,11:20:13.33:187,13,0	1/1:1,9:10:15.05:245,15,0	1/1:9,11:20:18.06:299,18,0	1/1:5,13:18:3.01:48,3,0	1/1:9,6:15:11.35:194,11,0	1/1:7,8:15:27.05:416,27,0	1/1:5,6:11:18.06:297,18,0	0/1:6,9:15:2.80:458,0,3	1/1:6,12:19:8.65:127,9,0	1/1:6,7:11:11.89:193,12,0	1/1:0,9:9:6.02:100,6,0	1/1:6,23:29:14.89:249,15,0	1/1:3,16:19:8.60:149,9,0	1/1:1,8:9:6.02:100,6,0	1/1:6,21:27:72.19:1158,72,0	1/1:3,23:27:42.61:686,43,0	1/1:1,3:4:3.01:50,3,0
chr10	36480485	.	G	GTCTCTC	5568.96	PASS	AB=0.560;AC=51;AF=0.911;AN=56;BaseQRankSum=0.371;DP=489;FS=15.924;HRun=0;HaplotypeScore=176.9661;InbreedingCoeff=0.4679;MQ=46.41;MQ0=20;MQRankSum=0.251;QD=14.77;ReadPosRankSum=2.396;VQSLOD=3.2945;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:15,7:24:6.42:68,6,0	1/1:5,0:5:3.01:37,3,0	0/0:57,0:10:21.07:0,21,380	0/0:55,0:9:8.90:0,9,195	1/1:13,0:14:6.01:58,6,0	1/1:8,3:13:3.95:102,4,0	1/1:3,4:15:3.92:92,4,0	1/1:18,0:17:23.91:265,24,0	1/1:11,0:11:6.02:74,6,0	1/1:11,4:18:47.85:1178,48,0	0/1:3,8:13:0:1,0,0	1/1:16,0:16:9.02:153,9,0	1/1:8,0:8:15.51:198,16,0	1/1:17,0:17:11.36:85,11,0	1/1:7,8:17:2.89:100,3,0	1/1:15,0:15:8.92:183,9,0	1/1:12,0:12:30.08:466,30,0	1/1:4,1:9:21.07:582,21,0	1/1:12,0:11:27.03:269,27,0	1/1:16,0:16:5.57:96,6,0	1/1:13,0:11:9.02:101,9,0	1/1:8,0:8:6.95:62,7,0	1/1:25,0:25:14.82:145,15,0	1/1:17,0:17:5.52:77,6,0	1/1:6,0:6:6.01:55,6,0	1/1:24,0:25:42.59:802,43,0	1/1:26,0:26:30.07:318,30,0	1/1:3,0:3:0.47:1,0,0
chr10	36480493	.	C	CTCTCTGTGTGTGTATG	8812.40	PASS	AB=1.000;AC=51;AF=0.911;AN=56;BaseQRankSum=-1.792;DP=491;FS=1.025;HRun=0;HaplotypeScore=208.2047;InbreedingCoeff=0.4202;MQ=39.41;MQ0=22;MQRankSum=1.418;QD=22.95;ReadPosRankSum=-1.480;VQSLOD=3.4178;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:24:11.70:87,12,0	1/1:4,0:5:3.01:36,3,0	0/0:54,0:7:21.03:0,21,366	0/0:52,0:8:9.50:0,10,189	1/1:9,2:12:6.49:86,6,0	1/1:13,0:13:6.96:101,7,0	1/1:13,0:13:5.88:53,6,0	1/1:18,0:16:40.60:819,41,0	1/1:6,0:9:6.49:112,6,0	0/1:18,0:18:52.21:319,0,52	1/1:14,0:13:0.94:2,1,0	1/1:11,2:18:10.38:349,10,0	1/1:6,0:7:15.05:421,15,0	1/1:15,0:17:9.02:150,9,0	1/1:20,0:20:2.43:56,2,0	1/1:5,2:15:8.09:458,8,0	1/1:9,5:16:33.11:1319,33,0	1/1:9,0:9:20.85:175,21,0	1/1:17,0:13:39.03:651,39,0	1/1:12,1:15:6.96:277,7,0	1/1:13,0:12:9.03:145,9,0	1/1:8,0:8:6.02:126,6,0	1/1:16,0:22:16.46:275,16,0	1/1:15,0:16:5.81:98,6,0	1/1:7,0:7:6.02:100,6,0	1/1:21,2:24:66.16:1798,66,0	1/1:27,0:26:36.59:799,37,0	1/1:1,0:1:0.47:1,0,0
chr10	36481244	.	GAACCTGGAGGCAGAAGCTGGTGCAGAGGCCATGAAGGGGTGC	G	3872.15	PASS	AB=0.667;AC=7;AF=0.135;AN=52;BaseQRankSum=6.698;DP=637;FS=22.317;HRun=0;HaplotypeScore=705.0449;InbreedingCoeff=0.7568;MQ=62.92;MQ0=4;MQRankSum=-4.818;QD=176.01;ReadPosRankSum=1.882;VQSLOD=0.5598;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,138,15237	0/0:10,0:10:30.10:0,30,4301	0/0:27,0:24:69.23:0,69,4834	0/0:31,0:27:68.23:0,68,5423	./.	0/0:22,0:22:66.21:0,66,7232	0/0:33,0:33:99:0,99,9611	0/0:17,0:17:48.16:0,48,3960	1/1:3,2:5:12.03:728,12,0	0/0:31,0:31:93.31:0,93,9242	0/0:9,0:9:27.09:0,27,3338	0/0:38,0:38:99:0,114,15375	0/0:19,0:19:57.20:0,57,7769	0/0:34,0:34:99:0,99,12209	0/0:29,0:29:87.30:0,87,13537	1/1:0,5:5:15.05:1641,15,0	0/1:4,4:8:99:1174,0,397	0/0:26,0:25:78.25:0,78,9596	0/0:29,0:28:81.28:0,81,7877	0/0:20,0:20:60.21:0,60,7884	0/0:49,0:49:99:0,144,18543	0/0:25,0:25:72.21:0,72,8581	0/0:19,0:19:57.20:0,57,6986	0/0:33,0:33:99:0,99,10956	0/0:25,0:25:72.21:0,72,8454	1/1:0,4:4:3.48:329,3,0	0/0:41,0:40:99:0,123,14791	./.
chr10	36481284	.	T	TG	967.55	PASS	AB=0.667;AC=9;AF=0.161;AN=56;BaseQRankSum=5.640;DP=610;FS=15.316;HRun=4;HaplotypeScore=118.4615;InbreedingCoeff=0.7705;MQ=51.65;MQ0=4;MQRankSum=-8.178;QD=18.61;ReadPosRankSum=-3.053;VQSLOD=1.7670;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:87.26:0,87,1112	0/0:11,0:11:30.10:0,30,389	0/0:25,0:13:36.09:0,36,441	0/0:39,0:21:50.43:0,50,670	1/1:0,7:7:2.53:19,3,0	0/0:14,0:14:42.14:0,42,545	0/0:25,0:25:63.17:0,63,786	0/0:17,0:17:42.14:0,42,545	1/1:2,7:9:19.69:297,20,0	0/0:30,0:30:87.20:0,87,1101	0/0:11,0:11:24.08:0,24,311	0/0:36,0:36:99:0,103,1322	0/0:29,0:29:84.74:0,85,1073	0/0:28,0:28:69.22:0,69,887	0/0:30,0:30:87.28:0,87,1128	1/1:5,10:15:15.51:356,16,0	0/1:8,8:15:20.14:234,0,20	0/0:17,0:17:48.15:0,48,618	0/0:27,0:27:72.19:0,72,915	0/0:17,0:17:51.16:0,51,652	0/0:45,0:42:99:0,105,1347	0/0:25,0:25:72.22:0,72,913	0/0:23,0:23:60.18:0,60,763	0/0:22,0:22:54.17:0,54,695	0/0:25,0:25:65.79:0,66,853	0/0:4,0:4:2.03:0,2,6	0/0:26,0:26:78.25:0,78,1010	1/1:0,5:5:15.05:213,15,0
chr10	36481362	.	G	GTAC	35281.16	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-9.707;DP=736;FS=1.161;HRun=0;HaplotypeScore=116.3176;InbreedingCoeff=0.9902;MQ=79.36;MQ0=0;MQRankSum=-10.501;QD=52.04;ReadPosRankSum=8.338;VQSLOD=6.5504;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,28:30:69.24:1538,69,0	1/1:2,8:11:24.08:536,24,0	0/0:32,0:32:60.20:0,60,1218	0/0:26,0:26:66.22:0,66,1027	1/1:5,20:25:51.18:1139,51,0	1/1:3,17:21:42.14:938,42,0	1/1:7,26:33:29.39:1624,29,0	1/1:4,19:23:57.20:1271,57,0	1/1:3,22:25:63.22:1405,63,0	1/1:6,34:41:99:2537,117,0	1/1:4,11:15:33.11:734,33,0	1/1:2,33:36:90.31:2008,90,0	1/1:1,20:21:57.20:1270,57,0	1/1:3,33:36:96.25:2142,96,0	1/1:4,20:27:60.21:1337,60,0	1/1:2,30:32:87.30:1939,87,0	1/1:2,31:33:90.31:2009,90,0	1/1:4,18:22:57.20:1272,57,0	1/1:8,5:12:15.05:318,15,0	1/1:1,20:20:42.14:938,42,0	1/1:4,32:36:75.26:1674,75,0	1/1:1,24:25:57.20:1272,57,0	1/1:2,20:24:38.40:870,38,0	1/1:2,20:24:54.19:1196,54,0	1/1:1,22:23:45.15:1005,45,0	1/1:1,22:23:66.21:1430,66,0	1/1:2,36:39:96.32:2142,96,0	1/1:4,12:16:33.11:737,33,0
chr10	36483215	.	ACT	A	16077.18	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=9.670;DP=513;FS=0.879;HRun=0;HaplotypeScore=87.4383;InbreedingCoeff=0.9905;MQ=76.43;MQ0=2;MQRankSum=-2.915;QD=39.21;ReadPosRankSum=3.839;VQSLOD=7.0158;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,32:32:84.28:1237,84,0	1/1:1,4:5:15.05:209,15,0	0/0:11,0:11:30.10:0,30,535	0/0:10,0:10:30.10:0,30,537	0/0:7,0:7:18.06:0,18,331	1/1:0,22:22:63.21:928,63,0	1/1:1,24:25:63.21:928,63,0	1/1:1,13:14:39.12:555,39,0	0/0:15,0:15:42.13:0,42,746	1/1:0,15:15:45.15:661,45,0	1/1:0,5:5:15.05:221,15,0	1/1:2,21:23:59.95:883,60,0	1/1:1,11:12:33.11:486,33,0	1/1:0,19:18:51.17:751,51,0	1/1:0,13:13:39.13:574,39,0	0/0:9,0:9:27.09:0,27,505	0/0:25,0:25:66.23:0,66,1221	1/1:0,28:28:66.22:970,66,0	1/1:1,17:18:51.16:733,51,0	1/1:1,8:9:24.03:315,24,0	1/1:0,90:89:99:3755,256,0	1/1:0,13:13:33.11:486,33,0	1/1:0,13:13:36.12:530,36,0	1/1:0,30:30:75.25:1104,75,0	1/1:2,15:17:33.11:486,33,0	0/0:19,0:19:57.19:0,57,1028	1/1:0,7:7:18.06:265,18,0	0/0:7,0:7:21.05:0,21,360
chr10	36484897	.	TG	T	4939.26	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=10.606;DP=486;FS=1.037;HRun=3;HaplotypeScore=61.4544;InbreedingCoeff=0.9625;MQ=61.30;MQ0=30;MQRankSum=1.610;QD=18.36;ReadPosRankSum=-1.319;VQSLOD=4.1018;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:23:65.67:502,66,0	1/1:4,0:3:8.93:63,9,0	0/0:53,0:12:28.37:0,28,211	0/0:55,0:9:14.79:0,15,119	0/0:16,0:16:41.90:0,42,343	1/1:13,0:13:35.84:279,36,0	1/1:4,0:5:11.98:98,12,0	1/1:5,17:23:50.78:408,51,0	0/0:12,0:11:18.99:0,19,209	1/1:3,13:14:36.35:286,36,0	1/1:1,8:9:17.62:106,18,0	1/1:14,0:14:38.89:316,39,0	1/1:9,0:9:17.74:118,18,0	1/1:15,0:15:35.91:300,36,0	1/1:20,0:21:56.81:458,57,0	0/0:11,0:10:24:0,24,208	0/0:24,0:23:65.81:0,66,536	1/1:14,0:14:20.56:242,21,0	1/1:0,5:5:14.98:124,15,0	1/1:1,17:17:47.25:298,47,0	1/1:9,0:9:23.90:190,24,0	1/1:1,17:18:41.33:261,41,0	1/1:0,10:10:8.77:51,9,0	1/1:15,0:14:35.82:277,36,0	1/1:15,0:16:41.81:329,42,0	0/0:16,0:16:18.64:0,19,331	1/1:12,0:12:29.87:233,30,0	0/0:29,0:21:53.85:0,54,436
chr10	36485349	.	C	CG	2604.04	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-10.296;DP=560;FS=1.564;HRun=7;HaplotypeScore=65.2275;InbreedingCoeff=0.9130;MQ=79.52;MQ0=0;MQRankSum=-1.212;QD=22.84;ReadPosRankSum=3.582;VQSLOD=3.9018;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,111,1054	0/0:10,0:10:27.04:0,27,261	0/0:18,0:18:43.59:0,44,402	0/0:23,0:23:47.25:0,47,428	1/1:5,6:11:12.04:145,12,0	0/0:23,0:23:54.08:0,54,521	0/0:25,0:25:56.65:0,57,543	0/0:27,0:27:60.09:0,60,579	1/1:1,14:15:33.10:399,33,0	0/0:13,0:13:24.01:0,24,226	0/0:6,0:6:9.01:0,9,87	0/0:27,0:27:75.10:0,75,718	0/0:17,0:17:48.08:0,48,462	0/0:14,0:14:39.03:0,39,362	0/0:21,0:21:45.06:0,45,434	1/1:2,21:23:48.15:580,48,0	1/1:1,39:40:99:1268,105,0	0/0:24,0:24:63.09:0,63,608	0/0:26,0:26:45.04:0,45,433	0/0:12,0:12:29.99:0,30,279	0/0:24,0:24:51.06:0,51,490	0/0:13,0:13:18:0,18,170	0/0:8,0:8:8.99:0,9,83	0/0:26,0:26:69.09:0,69,661	0/0:15,0:15:33.04:0,33,316	1/1:8,11:19:1.06:259,1,0	0/0:29,0:29:78.06:0,78,747	1/1:3,3:6:11.99:129,12,0
chr10	36485485	.	C	CT	3988.95	PASS	AB=0.680;AC=44;AF=0.786;AN=56;BaseQRankSum=-4.227;DP=505;FS=5.251;HRun=14;HaplotypeScore=66.2175;InbreedingCoeff=-0.0780;MQ=75.64;MQ0=0;MQRankSum=0.816;QD=8.17;ReadPosRankSum=1.663;VQSLOD=2.8710;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,14:25:14.71:178,15,0	0/1:3,5:8:13.27:20,0,13	0/0:16,0:12:10.99:0,11,52	0/1:14,0:13:12.90:13,0,68	1/1:9,21:30:35.84:285,36,0	1/1:7,14:21:13.74:245,14,0	0/1:6,9:16:1.68:129,0,2	0/1:16,12:31:6.76:230,0,7	1/1:0,7:7:5.68:37,6,0	1/1:11,9:21:23.60:171,24,0	1/1:3,17:20:6.25:273,6,0	0/1:6,7:13:43.53:82,0,44	1/1:6,9:15:11.29:85,11,0	1/1:7,3:10:9:79,9,0	0/1:11,5:16:17.61:18,0,30	1/1:7,10:18:9.49:193,9,0	0/1:8,19:28:14.13:236,0,14	1/1:6,15:21:18:158,18,0	0/1:10,9:21:4.94:201,0,5	1/1:5,11:18:16.46:228,16,0	0/1:5,6:11:13.41:88,0,13	1/1:7,10:17:12.10:128,12,0	1/1:0,8:8:12.47:106,12,0	1/1:2,6:8:6:53,6,0	1/1:9,20:30:22.57:311,23,0	1/1:13,11:25:27.31:226,27,0	1/1:8,15:23:4.73:166,5,0	0/1:3,8:12:23.69:52,0,24
chr10	36486427	.	AGTACCTG	A	7951.78	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=3.323;DP=684;FS=1.239;HRun=0;HaplotypeScore=204.2801;InbreedingCoeff=0.9892;MQ=88.40;MQ0=2;MQRankSum=-15.625;QD=60.24;ReadPosRankSum=0.820;VQSLOD=4.8678;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,18:22:48.16:1102,48,0	0/0:12,0:12:36.12:0,36,1160	0/0:27,0:27:81.28:0,81,3014	0/0:29,0:29:80.69:0,81,2653	0/0:24,0:24:69.24:0,69,2776	1/1:0,31:31:84.29:2126,84,0	1/1:1,12:13:30.10:763,30,0	0/0:36,0:36:99:0,105,3097	0/0:21,0:21:63.22:0,63,2580	1/1:1,22:22:66.22:1690,66,0	1/1:0,17:17:45.15:1069,45,0	0/0:22,0:22:66.23:0,66,2110	0/0:27,0:27:78.27:0,78,2374	0/0:20,0:20:54.19:0,54,1618	1/1:2,19:20:39.13:960,39,0	0/0:29,0:29:87.28:0,87,3414	0/0:22,0:22:66.21:0,66,2575	1/1:1,4:5:9.03:242,9,0	0/0:22,0:22:66.23:0,66,1926	0/0:27,0:27:78.27:0,78,2362	0/0:31,0:31:93.32:0,93,2891	0/0:21,0:21:60.21:0,60,1943	0/0:25,0:25:72.25:0,72,2212	0/0:37,0:37:99:0,108,3317	0/0:17,0:17:51.18:0,51,1587	0/0:42,1:43:48.62:0,49,4986	0/0:36,0:36:99:0,105,3374	0/0:24,0:24:69.24:0,69,2619
chr10	36486652	.	AG	A	11196.97	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=16.393;DP=640;FS=1.273;HRun=1;HaplotypeScore=104.5164;InbreedingCoeff=0.9998;MQ=81.25;MQ0=0;MQRankSum=-1.529;QD=39.01;ReadPosRankSum=1.931;VQSLOD=5.0154;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,108,1647	1/1:0,9:9:27.09:376,27,0	0/0:23,0:23:58.14:0,58,940	0/0:27,0:27:77.54:0,78,1128	0/0:27,0:27:81.28:0,81,1294	0/0:21,0:21:63.15:0,63,967	0/0:20,0:20:60.20:0,60,958	1/1:0,20:20:54.14:703,54,0	0/0:19,0:19:57.19:0,57,910	0/0:27,0:27:81.28:0,81,1293	0/0:21,0:21:63.21:0,63,1006	1/1:0,24:24:66.22:922,66,0	1/1:0,28:28:84.28:1164,84,0	1/1:0,26:26:63.21:881,63,0	0/0:25,0:25:72.25:0,72,1150	0/0:26,0:26:78.27:0,78,1242	0/0:22,0:22:66.22:0,66,1044	0/0:14,0:14:42.14:0,42,671	1/1:0,20:20:60.12:761,60,0	1/1:0,25:25:75.21:1026,75,0	1/1:0,34:34:93.31:1300,93,0	1/1:0,12:12:36.12:503,36,0	1/1:0,27:27:78.26:1090,78,0	1/1:0,26:26:75.25:1045,75,0	1/1:0,14:14:42.14:587,42,0	0/0:33,0:33:99:0,99,1583	1/1:0,22:22:60.20:837,60,0	0/0:11,0:11:33.11:0,33,527
chr10	36487341	.	G	GC	6308.91	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-13.196;DP=597;FS=3.084;HRun=0;HaplotypeScore=53.9548;InbreedingCoeff=0.9965;MQ=80.93;MQ0=0;MQRankSum=-2.045;QD=44.74;ReadPosRankSum=2.844;VQSLOD=5.1430;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:84.28:0,84,1174	0/0:5,0:5:15.05:0,15,209	0/0:13,0:13:32.29:0,32,496	0/0:17,0:17:51.14:0,51,676	1/1:1,36:37:99:1664,105,0	0/0:19,0:19:54.18:0,54,754	0/0:16,0:16:48.14:0,48,653	0/0:31,0:30:93.29:0,93,1270	1/1:0,17:17:51.17:815,51,0	0/0:30,0:30:90.29:0,90,1242	0/0:25,0:25:75.25:0,75,1049	0/0:18,0:18:54.18:0,54,752	0/0:22,0:22:66.22:0,66,917	0/0:16,0:16:48.15:0,48,654	0/0:25,0:24:75.19:0,75,1009	1/1:1,23:24:63.21:1007,63,0	1/1:0,26:26:78.27:1242,78,0	0/0:20,0:20:57.17:0,57,777	0/0:18,0:18:54.17:0,54,726	0/0:37,0:37:99:0,105,1455	0/0:19,0:19:57.19:0,57,797	0/0:18,0:18:54.18:0,54,751	0/0:24,0:24:72.24:0,72,1006	0/0:9,0:9:27.09:0,27,377	0/0:21,0:21:63.18:0,63,846	1/1:0,19:19:57.19:909,57,0	0/0:24,0:24:72.24:0,72,1007	1/1:0,18:18:42.14:671,42,0
chr10	36488755	.	TG	T	18332.45	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=11.164;DP=867;FS=0.276;HRun=5;HaplotypeScore=85.3527;InbreedingCoeff=0.9996;MQ=85.35;MQ0=0;MQRankSum=-4.117;QD=30.05;ReadPosRankSum=2.944;VQSLOD=5.3238;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,41:42:99:1225,108,0	1/1:1,9:10:24.07:272,24,0	0/0:30,0:30:77.90:0,78,968	0/0:28,0:28:75.17:0,75,958	0/0:32,0:32:96.29:0,96,1271	1/1:0,23:23:69.20:782,69,0	1/1:2,28:30:78.21:885,78,0	1/1:2,33:35:99:1069,99,0	0/0:41,0:41:99:0,117,1582	1/1:2,32:34:96.21:1042,96,0	1/1:0,30:30:87.25:987,87,0	1/1:1,42:43:99:1256,111,0	1/1:0,28:28:78.22:884,78,0	1/1:3,29:32:69.20:782,69,0	1/1:0,46:46:99:1259,111,0	0/0:43,0:42:99:0,123,1647	0/0:26,0:26:75.24:0,75,1010	1/1:1,14:15:36.10:408,36,0	1/1:0,17:17:51.12:560,51,0	1/1:0,36:36:99:1179,108,0	1/1:0,53:53:99:1565,138,0	1/1:0,22:22:62.77:691,63,0	1/1:0,20:20:54.15:613,54,0	1/1:1,37:38:99:1142,102,0	1/1:1,27:28:75.21:850,75,0	0/0:38,1:39:80.42:0,80,1431	1/1:0,28:28:78.22:884,78,0	0/0:18,0:18:54.18:0,54,738
chr10	36490302	.	GTCT	G	20349.92	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=12.720;DP=719;FS=12.465;HRun=0;HaplotypeScore=109.0632;InbreedingCoeff=0.9997;MQ=55.30;MQ0=2;MQRankSum=2.008;QD=41.28;ReadPosRankSum=2.945;VQSLOD=5.9004;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,39:41:99:1687,105,0	1/1:0,14:14:30.10:482,30,0	0/0:19,0:12:33.11:0,33,680	0/0:28,0:24:60.21:0,60,1298	0/0:28,0:28:84.26:0,84,1809	1/1:0,29:29:81.28:1301,81,0	1/1:1,23:24:63.21:1012,63,0	1/1:3,17:19:48.14:746,48,0	0/0:31,0:31:84.29:0,84,1852	1/1:1,22:23:63.20:990,63,0	1/1:0,16:15:42.14:674,42,0	1/1:0,21:21:63.21:1011,63,0	1/1:0,29:29:78.27:1243,78,0	1/1:1,30:31:81.28:1289,81,0	1/1:2,34:36:99:1591,99,0	0/0:35,0:35:99:0,99,2141	0/0:28,0:28:75.26:0,75,1655	1/1:2,17:19:42.14:675,42,0	1/1:3,19:19:27.31:747,27,0	1/1:3,26:29:72.25:1157,72,0	1/1:0,31:31:84.29:1350,84,0	1/1:1,18:18:39.13:627,39,0	1/1:0,12:12:36.12:578,36,0	1/1:0,24:24:66.23:1060,66,0	1/1:1,22:23:60.20:964,60,0	0/0:31,0:31:90.31:0,90,1987	1/1:2,28:30:75.21:1166,75,0	0/0:26,0:26:63.20:0,63,1349
chr10	36491400	.	G	GAAAA	21337.29	PASS	AB=0.808;AC=52;AF=0.929;AN=56;BaseQRankSum=-2.296;DP=685;FS=7.704;HRun=10;HaplotypeScore=159.2126;InbreedingCoeff=0.4164;MQ=48.23;MQ0=9;MQRankSum=-3.371;QD=31.99;ReadPosRankSum=-0.427;VQSLOD=1.8110;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,2:29:50.82:623,51,0	1/1:6,3:9:21.07:445,21,0	0/1:16,0:8:27.90:28,0,155	0/0:18,0:12:14.97:0,15,212	1/1:8,15:25:39.96:816,40,0	1/1:10,0:24:47.98:582,48,0	1/1:7,2:20:30.01:454,30,0	1/1:21,13:37:81.69:1646,82,0	1/1:7,8:18:30.10:678,30,0	1/1:9,1:33:65.99:849,66,0	1/1:7,0:20:36.07:484,36,0	1/1:10,14:28:20.67:1180,21,0	1/1:9,13:23:42.11:897,42,0	1/1:10,12:23:26.92:496,27,0	1/1:13,0:24:47.99:631,48,0	1/1:10,21:35:45.15:997,45,0	0/1:6,8:14:57.91:412,0,58	1/1:4,0:17:30.01:352,30,0	1/1:25,8:35:72.16:1398,72,0	1/1:9,25:36:66.23:1475,66,0	1/1:4,6:12:8.99:161,9,0	1/1:14,10:26:54.16:1114,54,0	1/1:13,8:21:42.10:857,42,0	1/1:8,12:22:27.56:537,28,0	1/1:9,13:25:45.15:911,45,0	1/1:16,12:28:63.21:1303,63,0	1/1:13,21:39:87.56:1814,88,0	1/1:3,6:9:9.03:199,9,0
chr10	36491493	.	TACATACATACAC	T	22595.54	PASS	AB=0.762;AC=50;AF=0.893;AN=56;BaseQRankSum=3.240;DP=604;FS=1.681;HRun=0;HaplotypeScore=217.9363;InbreedingCoeff=0.6741;MQ=48.42;MQ0=5;MQRankSum=-1.539;QD=40.86;ReadPosRankSum=5.402;VQSLOD=4.2731;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:18,2:20:15.02:254,15,0	1/1:1,12:13:18.06:662,18,0	0/0:24,0:12:17.19:0,17,346	0/0:27,0:15:41.99:0,42,599	1/1:0,35:35:44.86:1244,45,0	0/1:3,31:34:8.74:1063,0,9	0/1:15,0:15:0.72:128,0,1	1/1:3,29:32:85.97:637,86,0	1/1:0,18:18:24.08:576,24,0	1/1:18,10:27:77.85:1966,78,0	1/1:7,9:15:39.05:707,39,0	1/1:9,10:19:54.02:1162,54,0	1/1:0,16:16:21.07:632,21,0	1/1:0,15:15:21.07:725,21,0	1/1:0,24:24:36.12:1107,36,0	1/1:13,11:24:54.11:1316,54,0	1/1:10,1:11:21.01:303,21,0	1/1:9,2:11:14.52:454,15,0	1/1:0,15:15:40.29:768,40,0	1/1:15,13:28:57.15:1404,57,0	1/1:15,0:15:14.76:212,15,0	1/1:1,30:31:37.37:1099,37,0	1/1:1,28:29:30.10:786,30,0	1/1:11,3:13:12.25:96,12,0	1/1:9,9:18:45.06:1031,45,0	1/1:3,28:31:78.01:1806,78,0	1/1:19,10:29:71.15:1562,71,0	1/1:0,12:12:24.08:898,24,0
chr10	36493159	.	A	AAAAAG	4490.32	PASS	AB=0.692;AC=36;AF=0.643;AN=56;BaseQRankSum=-10.490;DP=542;FS=1.040;HRun=0;HaplotypeScore=95.6294;InbreedingCoeff=0.5824;MQ=48.41;MQ0=53;MQRankSum=-0.686;QD=12.47;ReadPosRankSum=1.913;VQSLOD=4.0537;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:27:8.93:396,9,0	1/1:4,0:4:8.85:97,9,0	0/0:26,0:7:0.84:0,1,20	0/0:31,0:5:3.88:0,4,26	0/0:24,0:23:49.86:0,50,423	1/1:4,0:15:8.91:192,9,0	0/1:5,0:12:13.34:140,0,13	1/1:11,0:31:48.54:600,49,0	0/0:13,0:13:21.44:0,21,234	1/1:26,0:23:36.20:385,36,0	1/1:3,3:19:20.77:280,21,0	1/1:16,1:16:15.58:179,16,0	1/1:13,2:14:18.38:281,18,0	1/1:13,0:12:25.16:189,25,0	1/1:2,1:15:2.93:64,3,0	0/0:17,0:15:26.99:0,27,296	0/0:26,0:22:20.07:0,20,207	1/1:20,0:14:15.48:212,15,0	1/1:17,2:17:7.65:225,8,0	1/1:2,18:25:33.45:403,33,0	0/1:6,0:5:6.25:47,0,6	1/1:7,0:7:15.33:89,15,0	0/1:3,7:15:12.10:240,0,12	1/1:6,4:8:5.81:109,6,0	1/1:4,11:15:7.88:158,8,0	0/0:23,0:23:47.78:0,48,505	0/1:11,22:35:1.56:204,0,2	0/0:22,0:8:21:0,21,184
chr10	36493163	.	A	AAG	117.17	PASS	AB=0.982;AC=11;AF=0.196;AN=56;BaseQRankSum=3.434;DP=540;FS=1.294;HRun=0;HaplotypeScore=93.1159;InbreedingCoeff=-0.0970;MQ=50.36;MQ0=43;MQRankSum=-3.590;QD=0.62;ReadPosRankSum=2.055;VQSLOD=1.7929;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:31,0:30:25.98:26,0,325	0/1:3,0:3:9.33:9,0,20	0/1:29,0:8:3.77:4,0,30	0/0:30,0:6:2.24:0,2,41	0/0:25,0:24:31.55:0,32,321	0/1:16,0:15:14.64:43,0,15	0/1:12,1:13:28.25:50,0,28	0/0:34,0:32:45.42:0,45,453	0/0:15,0:15:31.60:0,32,221	0/1:23,1:21:37.46:37,0,237	0/1:22,0:21:6.25:6,0,78	0/0:17,0:16:19.15:0,19,150	0/0:15,0:14:4.51:0,5,130	0/0:14,0:13:5.76:0,6,115	1/1:15,0:14:2.74:12,3,0	0/0:18,0:16:34.48:0,34,232	0/0:24,0:21:25.63:0,26,158	0/1:19,1:14:59.03:59,0,119	0/0:21,0:18:15.87:0,16,261	0/0:25,0:25:27.70:0,28,191	0/0:4,1:5:12.79:0,13,88	0/0:7,0:7:11.02:0,11,82	0/1:15,0:15:1.94:2,0,62	0/0:8,0:7:6.45:0,6,49	0/0:13,0:12:4.66:0,5,26	0/0:23,0:23:52.82:0,53,367	0/0:36,0:34:15.49:0,15,104	0/0:21,0:10:29.82:0,30,221
chr10	36493616	.	C	CAA	12025.09	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-18.606;DP=781;FS=6.706;HRun=0;HaplotypeScore=86.7552;InbreedingCoeff=0.9999;MQ=81.22;MQ0=0;MQRankSum=-0.438;QD=53.92;ReadPosRankSum=3.534;VQSLOD=5.0802;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,56:60:99:2965,150,0	0/0:11,0:11:33.11:0,33,538	0/0:20,0:20:56.01:0,56,799	0/0:22,0:22:62.57:0,63,926	0/0:37,0:37:99:0,111,1811	1/1:0,33:35:90.31:1829,90,0	1/1:1,26:27:72.25:1456,72,0	0/0:44,0:44:99:0,129,2035	0/0:25,0:25:75.24:0,75,1198	1/1:0,31:32:93.32:1876,93,0	1/1:2,19:21:57.19:1134,57,0	0/0:30,0:30:90.29:0,90,1440	0/0:27,0:27:78.20:0,78,1194	0/0:31,0:31:93.32:0,93,1517	1/1:2,21:23:66.18:1300,66,0	0/0:29,0:29:87.30:0,87,1419	0/0:35,0:35:99:0,102,1664	1/1:1,24:25:72.25:1463,72,0	0/0:37,0:37:99:0,111,1746	0/0:18,0:18:54.18:0,54,881	0/0:31,0:31:84.25:0,84,1320	0/0:21,0:21:60.19:0,60,952	0/0:22,0:22:60.19:0,60,955	0/0:39,0:39:99:0,117,1882	0/0:29,0:29:87.26:0,87,1370	0/0:20,0:20:57.19:0,57,930	0/0:20,0:20:60.20:0,60,979	0/0:10,0:10:30.10:0,30,490
chr10	36494358	.	CATGAACTA	C	23701.39	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=9.236;DP=559;FS=0.528;HRun=0;HaplotypeScore=289.6832;InbreedingCoeff=0.9884;MQ=82.81;MQ0=0;MQRankSum=-11.734;QD=47.31;ReadPosRankSum=5.881;VQSLOD=4.0389;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,8:16:34.54:747,35,0	1/1:9,0:9:23.95:376,24,0	0/0:32,0:32:82.83:0,83,3119	0/0:26,0:26:74.74:0,75,2629	1/1:13,19:32:69.22:1313,69,0	1/1:6,12:18:45.12:839,45,0	1/1:3,13:16:45.15:967,45,0	1/1:12,7:19:45.06:683,45,0	1/1:4,13:17:51.17:1119,51,0	1/1:0,21:21:50.90:1143,51,0	1/1:3,17:20:54.19:1103,54,0	1/1:18,0:18:51.17:800,51,0	1/1:22,0:22:62.70:922,63,0	1/1:14,0:14:39.12:609,39,0	1/1:8,10:18:45.15:894,45,0	1/1:12,8:20:51.16:1016,51,0	1/1:6,13:19:48.15:991,48,0	1/1:6,5:11:24.08:497,24,0	1/1:5,4:9:27.08:440,27,0	1/1:36,1:37:96.33:1558,96,0	1/1:7,0:7:18.06:342,18,0	1/1:29,0:29:69.23:1092,69,0	1/1:25,0:25:75.25:1159,75,0	1/1:16,0:16:26.21:382,26,0	1/1:18,0:18:54.18:865,54,0	1/1:11,21:32:93.32:2150,93,0	1/1:32,0:32:81.27:1291,81,0	1/1:1,5:6:18.06:403,18,0
chr10	36494367	.	AGGG	A	5134.39	PASS	AB=0.857;AC=42;AF=0.750;AN=56;BaseQRankSum=12.611;DP=504;FS=0.000;HRun=3;HaplotypeScore=298.5944;InbreedingCoeff=0.1008;MQ=81.37;MQ0=0;MQRankSum=-10.218;QD=11.41;ReadPosRankSum=11.139;VQSLOD=-0.5546;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:15,0:15:6.53:37,0,7	1/1:3,7:10:3.24:201,3,0	0/0:25,0:25:68.38:0,68,1626	0/0:29,0:29:82.76:0,83,1729	1/1:28,0:28:10.29:82,10,0	0/1:18,0:18:43.96:44,0,89	1/1:16,0:16:21.62:97,22,0	0/1:7,8:15:19.69:240,0,20	1/1:16,0:16:8.89:90,9,0	1/1:21,0:21:19.90:137,20,0	1/1:20,0:20:21.47:89,21,0	1/1:2,14:16:15.76:331,16,0	1/1:2,17:19:28.33:484,28,0	1/1:4,8:12:12.32:252,12,0	1/1:14,0:14:17.94:84,18,0	1/1:12,0:12:9.76:70,10,0	0/1:17,0:17:12.35:75,0,12	0/1:10,0:10:31.13:31,0,105	0/1:4,5:9:20.19:150,0,20	1/1:11,22:33:29.74:504,30,0	0/1:3,2:5:0:0,0,0	1/1:4,21:25:39.10:428,39,0	1/1:4,21:25:33.04:351,33,0	1/1:4,8:12:18.50:192,18,0	1/1:4,13:17:36.09:388,36,0	0/1:31,0:31:52.54:201,0,53	0/1:6,21:28:4.17:539,0,4	0/1:6,0:6:14.28:39,0,14
chr10	36494372	.	G	GAA	5873.26	PASS	AB=0.905;AC=31;AF=0.554;AN=56;BaseQRankSum=-3.858;DP=587;FS=0.000;HRun=1;HaplotypeScore=329.0781;InbreedingCoeff=0.3771;MQ=76.56;MQ0=0;MQRankSum=-8.556;QD=16.59;ReadPosRankSum=-0.779;VQSLOD=1.4453;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,10:14:18.84:218,19,0	0/1:13,0:13:23.09:91,0,23	0/0:26,0:25:58.71:0,59,880	0/0:30,0:30:73.61:0,74,1096	1/1:5,23:28:23.55:367,24,0	1/1:2,19:22:36.09:535,36,0	1/1:3,14:17:36.04:468,36,0	0/1:22,0:22:43.23:94,0,43	1/1:0,14:15:33.06:421,33,0	1/1:5,16:21:46.49:567,46,0	1/1:1,22:23:30.01:346,30,0	0/1:19,0:19:3.36:3,0,91	0/0:21,0:21:14.63:0,15,151	0/1:12,0:12:20.62:21,0,52	1/1:7,10:17:33:426,33,0	1/1:2,8:10:21.07:289,21,0	1/1:3,18:21:32.80:485,33,0	0/1:4,8:12:29.37:313,0,29	0/1:13,0:13:43.51:53,0,44	0/0:46,1:47:16.96:0,17,207	0/1:10,0:10:18.67:19,0,19	0/0:29,0:29:39.03:0,39,190	0/0:34,0:34:44.81:0,45,242	0/0:16,0:16:24.62:0,25,129	0/1:30,0:30:47.81:48,0,183	1/1:6,23:29:3.04:910,3,0	0/0:30,0:30:17.49:0,17,137	0/1:1,5:6:0.90:202,0,1
chr10	36494768	.	T	TA	20786.47	PASS	AB=0.958;AC=53;AF=0.946;AN=56;BaseQRankSum=-3.005;DP=709;FS=4.666;HRun=6;HaplotypeScore=88.3211;InbreedingCoeff=0.7700;MQ=74.37;MQ0=0;MQRankSum=-7.122;QD=29.87;ReadPosRankSum=4.625;VQSLOD=5.1871;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,39:45:99:1447,117,0	1/1:0,9:9:20.98:243,21,0	0/1:22,0:20:1.51:2,0,253	0/0:13,0:13:9.57:0,10,162	1/1:3,23:26:66.17:810,66,0	1/1:3,26:29:78.25:981,78,0	1/1:1,25:26:72.23:906,72,0	1/1:5,28:33:84.24:1041,84,0	1/1:1,17:18:42.13:528,42,0	1/1:5,31:36:90.27:1116,90,0	1/1:3,23:26:66.21:826,66,0	1/1:3,20:23:45.14:566,45,0	1/1:1,26:27:72.23:906,72,0	1/1:0,22:22:57.18:717,57,0	1/1:2,28:30:69.22:868,69,0	1/1:5,20:25:57.18:717,57,0	1/1:6,18:24:54.17:674,54,0	1/1:0,30:30:81.26:1019,81,0	1/1:3,11:14:30.08:364,30,0	1/1:2,22:24:60.14:736,60,0	1/1:3,18:21:45.14:566,45,0	1/1:5,23:28:66.13:809,66,0	1/1:5,25:30:59.95:755,60,0	1/1:1,27:28:63.20:793,63,0	1/1:1,28:29:78.25:981,78,0	1/1:4,31:35:93.30:1170,93,0	1/1:0,28:28:84.27:1057,84,0	1/1:2,5:7:15.05:189,15,0
chr10	36495664	.	TA	T	9037.17	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-4.374;DP=514;FS=39.852;HRun=11;HaplotypeScore=70.6437;InbreedingCoeff=0.9820;MQ=84.22;MQ0=0;MQRankSum=-7.027;QD=18.87;ReadPosRankSum=3.964;VQSLOD=3.4082;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,18:21:47.93:394,48,0	1/1:0,8:8:23.97:197,24,0	0/0:13,0:14:19.83:0,20,212	0/0:20,1:21:25.08:0,25,311	1/1:2,20:22:56.92:468,57,0	1/1:4,17:22:43.98:351,44,0	1/1:0,11:11:29.97:246,30,0	1/1:3,19:23:52.94:422,53,0	1/1:3,19:23:55.97:449,56,0	1/1:1,6:7:17.98:148,18,0	1/1:5,13:19:34.98:277,35,0	1/1:3,15:18:38.94:320,39,0	1/1:3,20:23:53.93:443,54,0	1/1:4,17:21:44.78:369,45,0	1/1:3,10:13:29.95:246,30,0	1/1:5,19:24:24.93:411,25,0	1/1:2,15:17:32.96:271,33,0	1/1:1,13:14:29.96:246,30,0	1/1:2,11:13:35.90:287,36,0	1/1:1,15:16:15.92:332,16,0	1/1:2,13:15:38.95:320,39,0	1/1:3,22:25:56.90:468,57,0	1/1:4,19:23:50.90:418,51,0	1/1:3,9:14:31.03:233,31,0	1/1:1,14:15:38.96:320,39,0	1/1:6,20:26:59.81:481,60,0	1/1:6,29:36:82.93:671,83,0	1/1:0,10:10:29.97:246,30,0
chr10	36500105	.	G	GGATA	13829.24	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-2.849;DP=510;FS=9.858;HRun=0;HaplotypeScore=131.2083;InbreedingCoeff=0.8868;MQ=56.29;MQ0=4;MQRankSum=3.676;QD=28.75;ReadPosRankSum=4.739;VQSLOD=4.2344;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:28:48.52:669,49,0	1/1:4,1:5:15.02:183,15,0	0/0:16,0:9:10.28:0,10,148	0/0:13,0:7:18.01:0,18,227	1/1:23,0:22:42.75:507,43,0	1/1:22,0:22:57.04:950,57,0	1/1:14,0:13:36.08:536,36,0	1/1:27,0:26:54.01:763,54,0	1/1:9,0:9:24.69:342,25,0	1/1:24,0:23:60.15:1029,60,0	1/1:24,0:24:56.67:907,57,0	1/1:18,0:18:31.07:450,31,0	1/1:6,4:10:27.09:481,27,0	1/1:18,2:20:34.89:633,35,0	1/1:17,0:17:30.10:462,30,0	1/1:15,0:15:38.98:526,39,0	1/1:30,0:30:48.13:510,48,0	1/1:18,0:18:19.92:349,20,0	1/1:18,0:17:38.59:595,39,0	1/1:25,1:26:52.97:922,53,0	1/1:6,0:6:9.03:199,9,0	1/1:7,2:9:16.93:288,17,0	1/1:18,0:18:29.18:321,29,0	1/1:19,0:19:41.23:447,41,0	1/1:4,19:23:9.03:228,9,0	1/1:16,0:16:30.59:290,31,0	1/1:32,3:34:64.57:1163,65,0	1/1:7,0:7:12.82:80,13,0
chr10	36500114	.	GATAA	G	4785.76	PASS	AB=0.980;AC=30;AF=0.536;AN=56;BaseQRankSum=-9.837;DP=512;FS=3.832;HRun=0;HaplotypeScore=165.3916;InbreedingCoeff=-0.4874;MQ=54.81;MQ0=5;MQRankSum=3.105;QD=10.29;ReadPosRankSum=-3.355;VQSLOD=3.9563;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:27:99:245,0,118	1/1:7,0:7:5.28:76,5,0	0/0:12,0:6:10.83:0,11,95	0/0:12,0:6:17.94:0,18,159	1/1:1,24:24:59.32:610,59,0	0/1:25,0:25:99:346,0,225	1/1:16,0:15:32.67:275,33,0	0/1:10,19:28:45.76:378,0,46	0/1:10,0:10:55.64:119,0,56	0/1:24,0:23:99:191,0,179	0/1:21,0:21:70.47:267,0,70	0/1:17,0:17:99:156,0,115	0/1:14,0:14:37.39:37,0,220	0/1:18,0:18:99:128,0,174	0/1:14,0:14:82.98:83,0,168	0/1:17,0:17:70.07:178,0,70	0/1:26,0:26:99:178,0,213	0/1:16,0:15:39.28:159,0,39	1/1:17,0:16:13.97:317,14,0	0/1:25,0:25:99:208,0,154	1/1:6,0:6:1.87:40,2,0	0/1:8,0:8:68.53:69,0,87	0/1:17,0:17:99:128,0,126	0/1:20,0:20:99:138,0,187	0/0:23,0:23:18.05:0,18,320	0/1:21,0:21:94.13:94,0,234	0/1:33,0:32:99:317,0,200	0/1:12,0:12:47.84:48,0,157
chr10	36500118	.	A	AATAG	3543.11	PASS	AB=1.000;AC=37;AF=0.712;AN=52;BaseQRankSum=-3.779;DP=529;FS=12.719;HRun=0;HaplotypeScore=182.2045;InbreedingCoeff=0.4722;MQ=54.39;MQ0=5;MQRankSum=-1.965;QD=8.99;ReadPosRankSum=-1.960;VQSLOD=1.9957;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:28,1:29:28.64:437,29,0	1/1:8,0:8:3:26,3,0	./.	./.	0/0:25,0:24:20.69:0,21,150	1/1:21,2:26:39.13:764,39,0	1/1:15,0:14:8.97:87,9,0	1/1:33,0:32:20.03:128,20,0	0/1:13,0:13:21.86:22,0,73	1/1:22,1:23:19.30:283,19,0	1/1:19,1:20:20.94:263,21,0	0/0:17,0:17:20.26:0,20,200	1/1:13,0:13:20.29:129,20,0	1/1:18,0:18:11.43:134,11,0	1/1:4,7:14:18.06:408,18,0	0/1:18,0:18:3.24:3,0,104	0/0:27,0:27:14.31:0,14,288	1/1:15,0:15:18.03:292,18,0	1/1:18,0:17:6.48:30,6,0	1/1:27,0:27:16.79:170,17,0	1/1:6,0:6:6.24:47,6,0	1/1:8,0:8:4.22:70,4,0	0/1:18,0:18:11.80:12,0,146	0/0:23,0:23:11.29:0,11,252	0/1:23,0:23:47.62:48,0,140	0/0:21,0:21:20.03:0,20,290	1/1:33,0:32:10.25:182,10,0	0/1:14,0:14:9.58:10,0,174
chr10	36500218	.	A	AACAC	2716.62	PASS	AB=0.839;AC=33;AF=0.611;AN=54;BaseQRankSum=-0.956;DP=497;FS=1.495;HRun=0;HaplotypeScore=119.1377;InbreedingCoeff=0.2768;MQ=69.38;MQ0=6;MQRankSum=2.166;QD=7.70;ReadPosRankSum=-2.579;VQSLOD=2.2688;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:26,3:28:26.53:392,27,0	0/0:10,0:10:3.90:0,4,49	./.	0/1:34,0:22:0:0,0,0	0/0:18,0:19:21.06:0,21,305	0/1:7,4:15:41.53:208,0,42	1/1:6,4:10:9.03:213,9,0	1/1:29,0:29:7.30:49,7,0	0/0:6,0:7:9.02:0,9,122	1/1:13,2:16:14.53:389,15,0	1/1:8,5:19:8.77:154,9,0	1/1:14,0:15:5.74:37,6,0	1/1:6,0:7:2.74:12,3,0	1/1:11,4:15:9.03:213,9,0	1/1:7,9:17:26.83:578,27,0	0/0:11,0:11:14.78:0,15,197	0/0:25,0:25:36.98:0,37,556	0/1:8,5:15:29.53:352,0,30	0/1:9,0:9:6.97:7,0,60	1/1:13,0:18:5.49:25,5,0	0/1:18,0:19:12.71:13,0,61	0/1:7,0:12:12.95:13,0,63	1/1:7,0:16:5.71:32,6,0	0/1:14,0:19:2.35:104,0,2	1/1:8,0:7:2.56:70,3,0	0/1:12,0:15:0.53:1,0,179	0/1:9,0:14:25.48:25,0,36	0/0:21,0:21:30.08:0,30,440
chr10	36500326	.	A	AT	4124.35	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-9.648;DP=490;FS=8.294;HRun=5;HaplotypeScore=50.5459;InbreedingCoeff=0.9582;MQ=87.99;MQ0=0;MQRankSum=-2.161;QD=34.66;ReadPosRankSum=1.033;VQSLOD=3.7069;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,34:36:93.30:1223,93,0	0/0:5,0:5:15.04:0,15,161	0/0:23,0:23:60.10:0,60,611	0/0:22,0:21:45.01:0,45,446	0/0:18,0:18:42.10:0,42,451	1/1:0,13:14:39.13:513,39,0	1/1:2,12:14:30.10:395,30,0	0/0:23,0:23:63.14:0,63,665	0/0:12,0:12:36.09:0,36,387	1/1:3,18:21:57.18:744,57,0	1/1:0,10:10:27.09:355,27,0	0/0:16,0:16:48.12:0,48,516	0/0:17,0:17:51.06:0,51,523	0/0:16,0:16:48.12:0,48,516	1/1:1,15:16:45.15:592,45,0	0/0:17,0:17:51.13:0,51,548	0/0:15,0:15:36.07:0,36,378	1/1:1,7:8:24.07:303,24,0	0/0:23,0:23:63.13:0,63,666	0/0:22,0:22:63.16:0,63,677	0/0:30,0:30:84.18:0,84,885	0/0:10,0:10:27.07:0,27,290	0/0:16,0:16:45.11:0,45,484	0/0:18,0:18:45.11:0,45,484	0/0:15,0:15:45.06:0,45,470	0/0:24,0:24:60.13:0,60,637	0/0:21,0:21:60.05:0,60,611	0/0:8,0:8:1.63:0,2,203
chr10	36500611	.	A	ACACACACACACACACACACG	9258.22	PASS	AB=0.997;AC=31;AF=0.554;AN=56;BaseQRankSum=2.853;DP=560;FS=2.205;HRun=0;HaplotypeScore=183.9358;InbreedingCoeff=-0.4479;MQ=50.41;MQ0=46;MQRankSum=-5.546;QD=17.87;ReadPosRankSum=4.940;VQSLOD=3.8361;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:31,0:30:95.36:188,0,95	0/0:2,0:2:5.99:0,6,50	0/0:25,0:9:1.76:0,2,135	0/1:25,0:15:12.30:12,0,200	1/1:14,0:13:12:367,12,0	0/1:23,0:23:63.86:723,0,64	0/1:32,0:29:80.89:152,0,81	0/1:32,0:30:99:523,0,382	1/1:2,13:21:6.02:548,6,0	0/1:24,0:23:99:569,0,318	0/1:16,0:16:99:236,0,167	0/1:12,0:11:83.86:284,0,84	0/1:16,0:16:60.38:60,0,174	0/1:27,0:26:99:155,0,204	0/1:21,0:21:99:523,0,191	1/1:10,1:11:14.97:388,15,0	1/1:0,16:23:9.03:811,9,0	0/1:13,0:13:96.93:149,0,97	0/1:16,0:13:99:124,0,169	0/0:14,0:12:17.98:0,18,151	0/1:34,0:30:99:509,0,156	0/1:20,0:16:45.25:45,0,151	0/1:17,0:15:78.86:419,0,79	0/1:30,0:29:69.19:1095,0,69	0/1:14,0:14:63.90:155,0,64	1/1:17,0:16:44.40:903,44,0	0/1:14,0:13:63.63:194,0,64	1/1:6,0:5:11.97:125,12,0
chr10	36505203	.	TCA	T	16410.58	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=18.031;DP=734;FS=0.599;HRun=0;HaplotypeScore=133.4596;InbreedingCoeff=0.9965;MQ=77.64;MQ0=0;MQRankSum=-5.049;QD=35.22;ReadPosRankSum=4.344;VQSLOD=6.9923;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,135,2337	1/1:0,10:10:27.09:377,27,0	0/0:24,0:24:66.16:0,66,1152	0/0:39,0:39:81.08:0,81,1371	1/1:2,19:21:54.18:756,54,0	0/0:22,0:21:63.17:0,63,1031	0/0:30,0:30:81.28:0,81,1451	1/1:3,29:32:87.27:1184,87,0	1/1:0,26:26:75.25:1049,75,0	0/0:29,0:29:84.26:0,84,1453	0/0:16,0:16:48.16:0,48,858	1/1:0,28:28:75.25:1050,75,0	1/1:1,19:20:48.16:670,48,0	1/1:1,33:34:93.31:1301,93,0	0/0:40,0:40:99:0,117,2077	1/1:3,17:20:48.16:672,48,0	1/1:2,27:29:75.25:1045,75,0	0/0:21,0:21:60.17:0,60,1047	1/1:2,17:19:51.15:684,51,0	1/1:0,16:16:45.15:630,45,0	1/1:3,26:29:60.20:840,60,0	1/1:2,33:35:84.28:1176,84,0	1/1:0,15:15:42.14:588,42,0	1/1:2,27:29:78.26:1092,78,0	1/1:1,22:23:57.19:798,57,0	1/1:4,32:36:14.23:1154,14,0	1/1:0,28:28:72.24:1008,72,0	1/1:1,15:16:24.08:336,24,0
chr10	36508954	.	C	CA	3547.58	PASS	AB=0.876;AC=34;AF=0.680;AN=50;BaseQRankSum=4.241;DP=673;FS=9.271;HRun=6;HaplotypeScore=36.5735;InbreedingCoeff=0.6971;MQ=21.95;MQ0=391;MQRankSum=0.540;QD=8.29;ReadPosRankSum=-1.623;VQSLOD=-0.4642;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:18:27.04:0,27,275	1/1:14,2:2:3.01:38,3,0	./.	./.	1/1:26,8:11:17.99:193,18,0	0/0:41,0:12:15.02:0,15,153	0/0:11,0:8:15.03:0,15,153	./.	1/1:23,11:13:27.09:339,27,0	0/0:53,0:15:42.09:0,42,429	0/0:27,0:7:6.01:0,6,61	1/1:12,16:17:39.12:490,39,0	1/1:15,8:9:20.91:194,21,0	1/1:12,11:11:27.01:305,27,0	0/0:35,0:9:18.04:0,18,183	1/1:16,7:7:12.04:151,12,0	1/1:17,6:7:18.06:226,18,0	0/0:25,0:8:15.03:0,15,153	1/1:9,3:3:9.03:113,9,0	1/1:13,6:6:15.01:171,15,0	1/1:6,2:2:6.02:75,6,0	1/1:15,4:5:9:96,9,0	1/1:19,13:14:33.07:395,33,0	1/1:8,3:3:9.03:113,9,0	1/1:20,7:7:21.01:232,21,0	0/1:25,8:11:34.13:237,0,34	1/1:37,8:9:12.04:151,12,0	0/1:17,1:6:28.67:29,0,52
chr10	36509845	.	GTTTA	G	504.04	PASS	AB=0.769;AC=13;AF=0.500;AN=26;BaseQRankSum=1.537;DP=658;FS=23.996;HRun=0;HaplotypeScore=10.9488;InbreedingCoeff=0.4271;MQ=11.21;MQ0=453;MQRankSum=-0.415;QD=2.78;ReadPosRankSum=1.830;VQSLOD=0.0631;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	1/1:8,3:2:3.01:56,3,0	./.	./.	./.	./.	./.	1/1:27,1:1:3.01:45,3,0	0/0:18,0:7:6.02:0,6,160	./.	./.	./.	./.	./.	./.	0/0:32,0:8:12.04:0,12,251	0/0:20,0:3:9.03:0,9,208	0/0:13,0:4:3.01:0,3,80	0/0:13,1:2:3.01:0,3,80	1/1:27,15:8:9.03:168,9,0	0/1:14,6:6:32.90:103,0,33	./.	./.	1/1:5,3:3:2.68:56,3,0	1/1:7,11:4:9.03:168,9,0	0/0:43,0:4:9.03:0,9,227	1/1:50,4:5:2.98:22,3,0	./.
chr10	36510105	.	TGAA	T	2968.10	PASS	AB=0.932;AC=31;AF=0.674;AN=46;BaseQRankSum=3.965;DP=531;FS=9.809;HRun=0;HaplotypeScore=22.5642;InbreedingCoeff=0.5435;MQ=13.72;MQ0=337;MQRankSum=2.416;QD=9.02;ReadPosRankSum=0.749;VQSLOD=0.7255;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:2:3.01:0,3,66	./.	./.	./.	./.	0/0:22,0:5:6.02:0,6,132	0/0:12,0:3:3.01:0,3,66	1/1:5,2:2:6.02:96,6,0	1/1:15,5:5:15.05:241,15,0	0/0:47,0:6:18.06:0,18,397	0/0:42,0:5:3.01:0,3,66	1/1:10,7:4:12.04:193,12,0	1/1:14,8:8:24.08:385,24,0	1/1:11,2:3:6.02:96,6,0	0/0:16,0:10:30.10:0,30,660	1/1:13,11:11:33.11:508,33,0	1/1:8,5:4:12.04:193,12,0	0/0:6,0:1:3.01:0,3,66	1/1:4,1:1:3.01:48,3,0	0/1:38,3:9:99:120,0,277	1/1:12,4:4:6.02:96,6,0	1/1:30,3:5:3.01:48,3,0	1/1:17,6:2:6.02:96,6,0	./.	1/1:20,3:3:6.02:96,6,0	1/1:16,13:10:30.10:481,30,0	1/1:23,9:10:24.08:375,24,0	1/1:8,3:1:3.01:48,3,0
chr10	36512710	.	T	TA	2285.97	PASS	AB=1.000;AC=27;AF=0.614;AN=44;BaseQRankSum=1.179;DP=187;FS=10.514;HRun=9;HaplotypeScore=38.7699;InbreedingCoeff=0.7265;MQ=50.19;MQ0=11;MQRankSum=-6.196;QD=17.72;ReadPosRankSum=-0.457;VQSLOD=2.4387;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:6:17.21:0,17,134	1/1:0,2:2:6.02:66,6,0	0/0:24,0:6:13.18:0,13,74	0/1:40,0:6:10.44:11,0,10	1/1:1,10:11:33.07:351,33,0	0/0:4,0:4:12:0,12,104	0/0:3,0:3:8.04:0,8,58	1/1:4,12:16:36.09:390,36,0	1/1:1,3:4:12.02:124,12,0	0/0:2,0:2:6:0,6,52	0/0:4,0:4:12:0,12,104	1/1:1,3:4:12.03:130,12,0	1/1:1,0:1:3.01:33,3,0	1/1:0,6:6:18.04:193,18,0	0/0:4,0:4:12:0,12,104	1/1:1,0:1:3.01:33,3,0	1/1:2,4:6:7.51:155,8,0	0/0:8,0:7:18:0,18,156	1/1:5,7:12:6.34:244,6,0	./.	./.	./.	./.	./.	./.	1/1:3,8:11:30.07:324,30,0	1/1:1,3:4:9:90,9,0	1/1:0,9:10:29.91:313,30,0
chr10	36514795	.	A	ATT	6139.97	PASS	AB=0.559;AC=47;AF=0.839;AN=56;BaseQRankSum=-2.094;DP=536;FS=2.808;HRun=11;HaplotypeScore=101.9008;InbreedingCoeff=0.2705;MQ=75.70;MQ0=1;MQRankSum=-3.497;QD=12.16;ReadPosRankSum=1.967;VQSLOD=3.4436;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:12,1:39:51.90:471,52,0	1/1:0,0:10:17.47:60,17,0	0/0:16,0:14:4.97:0,5,126	0/0:15,0:15:21.04:0,21,162	1/1:10,3:38:79.79:763,80,0	1/1:4,1:21:39.07:387,39,0	1/1:3,1:14:33.03:316,33,0	1/1:6,1:25:44.04:194,44,0	1/1:4,0:17:33.01:309,33,0	1/1:11,1:26:48.08:484,48,0	1/1:7,1:20:37.25:343,37,0	1/1:2,0:16:29.74:103,30,0	0/1:6,0:25:11.77:91,0,12	0/1:6,0:28:11.78:107,0,12	1/1:1,1:14:36.07:367,36,0	1/1:1,0:16:42.07:401,42,0	1/1:4,0:22:42.04:396,42,0	1/1:1,0:6:12.02:114,12,0	1/1:3,0:13:24.38:83,24,0	0/1:4,0:18:22.73:75,0,23	1/1:2,0:13:17.47:60,17,0	1/1:2,0:14:27.79:105,28,0	0/1:3,1:18:18.39:103,0,18	1/1:2,0:18:29.94:103,30,0	1/1:3,0:24:47.67:169,48,0	1/1:9,0:22:42.01:425,42,0	0/1:5,0:22:17.39:84,0,17	1/1:4,0:5:3:29,3,0
chr10	36516220	.	A	ATT	4408.26	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-9.867;DP=479;FS=1.953;HRun=11;HaplotypeScore=73.2272;InbreedingCoeff=0.9305;MQ=72.58;MQ0=1;MQRankSum=1.908;QD=20.41;ReadPosRankSum=-1.269;VQSLOD=4.0332;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:30:44.27:0,44,181	1/1:6,3:9:3.01:44,3,0	0/0:15,0:15:6.60:0,7,122	0/0:10,0:10:18.56:0,19,137	0/0:23,0:24:65.98:0,66,620	0/0:17,0:17:27.87:0,28,94	0/0:19,0:19:26.68:0,27,105	1/1:11,18:30:56.80:736,57,0	0/0:15,0:15:36.01:0,36,348	0/0:19,0:19:29.11:0,29,106	0/0:14,0:14:14.48:0,14,52	1/1:4,12:16:21.07:304,21,0	1/1:4,11:15:12.04:174,12,0	1/1:1,8:10:12.04:174,12,0	0/0:15,0:15:23.99:0,24,83	0/0:24,0:25:62.97:0,63,592	0/0:16,0:18:41.72:0,42,433	0/0:8,0:8:8.88:0,9,31	1/1:3,9:12:28.84:321,29,0	1/1:5,16:22:47.57:605,48,0	1/1:1,9:11:9.03:130,9,0	1/1:3,10:13:31.83:382,32,0	1/1:4,9:14:20.44:269,20,0	1/1:2,10:12:15.05:217,15,0	1/1:4,16:22:38.62:530,39,0	0/0:23,0:23:60.04:0,60,582	1/1:8,19:30:40.61:522,41,0	0/0:9,0:9:24.01:0,24,233
chr10	36516230	.	TTA	T	403.40	PASS	AB=0.956;AC=9;AF=0.161;AN=56;BaseQRankSum=4.160;DP=463;FS=6.034;HRun=0;HaplotypeScore=79.0151;InbreedingCoeff=0.3664;MQ=68.25;MQ0=1;MQRankSum=-1.457;QD=3.70;ReadPosRankSum=2.821;VQSLOD=1.4908;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:28:39.17:93,0,39	0/0:4,0:4:8.96:0,9,83	0/0:14,0:13:20.61:0,21,343	0/0:10,0:9:9.30:0,9,221	0/0:26,0:26:73.77:0,74,1203	1/1:13,0:13:26.08:79,26,0	0/1:15,1:16:22.73:72,0,23	0/0:26,0:26:78.16:0,78,913	0/0:18,0:18:54.09:0,54,795	0/1:16,2:18:1.55:173,0,2	0/1:13,0:13:33.60:40,0,34	0/0:18,0:18:41.83:0,42,426	0/0:16,0:16:24.02:0,24,248	0/0:14,0:14:27.04:0,27,280	0/1:15,1:16:28.95:70,0,29	0/0:24,0:24:70.45:0,70,1160	0/0:20,0:20:59.97:0,60,914	1/1:5,0:5:8.15:25,8,0	0/0:12,0:12:33.26:0,33,365	0/0:20,0:20:55.92:0,56,684	0/0:12,0:12:12.03:0,12,138	0/0:13,0:13:35.90:0,36,380	0/0:15,0:15:36.06:0,36,389	0/0:10,0:10:14.88:0,15,163	0/0:19,0:19:48.12:0,48,564	0/0:27,0:27:75.18:0,75,1225	0/0:24,0:24:50.90:0,51,560	0/0:12,0:12:33.10:0,33,553
chr10	36516231	.	TA	T	2527.11	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=0.763;DP=447;FS=2.691;HRun=2;HaplotypeScore=64.1697;InbreedingCoeff=0.8854;MQ=68.72;MQ0=1;MQRankSum=-1.342;QD=22.36;ReadPosRankSum=1.184;VQSLOD=3.6414;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,21:25:53.57:626,54,0	0/0:4,0:4:5.94:0,6,42	0/0:13,0:13:31.92:0,32,294	0/1:10,0:9:7.01:7,0,140	0/0:25,0:25:69.65:0,70,865	1/1:0,12:12:36.12:462,36,0	1/1:2,13:15:30.01:364,30,0	0/0:25,0:25:74.01:0,74,600	0/0:17,0:17:51.06:0,51,583	1/1:9,9:18:46.79:503,47,0	1/1:1,12:13:24.55:259,25,0	0/0:17,0:17:30.29:0,30,270	0/0:14,0:14:23.94:0,24,192	0/0:12,0:12:26.95:0,27,224	1/1:2,13:15:30.01:365,30,0	0/0:25,0:25:72.63:0,73,886	0/0:20,0:20:48.70:0,49,640	1/1:1,4:5:12.02:137,12,0	0/0:11,0:11:27.60:0,28,225	0/0:23,0:23:33.04:0,33,511	0/0:13,0:13:11.97:0,12,95	0/0:13,0:13:31.98:0,32,234	0/0:14,0:14:35.91:0,36,291	0/0:9,0:9:9.86:0,10,90	0/0:19,0:19:44.85:0,45,356	0/0:25,0:25:72.21:0,72,910	0/0:22,0:22:44.81:0,45,350	0/0:12,0:12:33.08:0,33,408
chr10	36516341	.	T	TA	314.15	PASS	AB=1.000;AC=28;AF=0.824;AN=34;BaseQRankSum=1.748;DP=63;FS=24.992;HRun=0;HaplotypeScore=18.4720;InbreedingCoeff=0.1655;MQ=144.86;MQ0=7;MQRankSum=-2.183;QD=12.08;ReadPosRankSum=-3.756;VQSLOD=1.3305;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:12,0:13:29.20:0,29,381	0/0:19,0:15:17.68:0,18,352	1/1:1,0:1:2.99:24,3,0	./.	1/1:1,0:1:3:25,3,0	1/1:1,0:1:3:29,3,0	0/1:2,0:2:18.98:19,0,36	./.	1/1:1,2:2:5.93:47,6,0	./.	1/1:1,0:1:2.99:23,3,0	1/1:1,0:1:3:25,3,0	1/1:1,0:1:2.90:16,3,0	./.	1/1:0,1:1:2.94:18,3,0	0/1:4,0:3:11.06:30,0,11	1/1:3,0:2:6.01:55,6,0	1/1:2,0:2:5.90:41,6,0	./.	./.	./.	1/1:2,0:2:3:25,3,0	1/1:0,2:2:3:27,3,0	./.	./.	1/1:1,0:1:2.99:24,3,0
chr10	36516656	.	G	GGAAA	9601.06	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-11.144;DP=638;FS=31.454;HRun=0;HaplotypeScore=225.0784;InbreedingCoeff=0.9820;MQ=84.98;MQ0=0;MQRankSum=-15.069;QD=74.43;ReadPosRankSum=-0.517;VQSLOD=1.9695;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,18:19:51.09:1284,51,0	0/0:11,0:11:33.09:0,33,646	0/0:32,0:32:84.29:0,84,1687	0/0:19,0:18:48.14:0,48,887	0/0:20,0:20:60.21:0,60,1216	1/1:2,10:11:33.11:954,33,0	1/1:11,22:34:93.32:2655,93,0	0/0:29,0:29:84.25:0,84,1681	0/0:23,0:23:69.22:0,69,1393	1/1:2,9:12:33.09:890,33,0	1/1:1,7:8:21.07:590,21,0	0/0:37,0:37:99:0,111,2210	0/0:23,0:23:69.21:0,69,1402	0/0:32,0:32:93.32:0,93,1945	1/1:3,21:28:75.26:2099,75,0	0/0:27,0:27:78.27:0,78,1612	0/0:49,0:49:99:0,144,2972	1/1:4,11:16:39.13:1129,39,0	0/0:18,0:18:45.15:0,45,940	0/0:14,0:14:39.12:0,39,775	0/0:39,0:39:99:0,108,2189	0/0:13,0:13:36.12:0,36,734	0/0:15,0:15:45.15:0,45,924	0/0:31,1:32:6.60:0,7,1783	0/0:12,0:12:36.12:0,36,755	0/0:23,0:23:66.23:0,66,1356	0/0:30,0:29:81.28:0,81,1697	0/0:11,0:11:33.11:0,33,692
chr10	36517124	.	TGGGGC	T	2176.27	PASS	AB=1.000;AC=36;AF=0.783;AN=46;BaseQRankSum=-0.411;DP=209;FS=4.016;HRun=0;HaplotypeScore=48.3989;InbreedingCoeff=0.5360;MQ=92.21;MQ0=2;MQRankSum=-4.299;QD=14.13;ReadPosRankSum=3.140;VQSLOD=1.5536;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:8:11.94:0,12,152	1/1:3,0:3:2.98:22,3,0	0/1:15,0:10:8.83:9,0,76	0/0:24,0:15:13.28:0,13,223	1/1:10,2:12:6.02:116,6,0	0/0:7,0:7:9:0,9,133	./.	1/1:6,0:6:2.97:20,3,0	1/1:7,8:15:15.05:286,15,0	0/0:4,0:4:12.01:0,12,247	./.	1/1:5,3:8:9.03:171,9,0	1/1:5,3:8:6.02:116,6,0	1/1:6,5:11:9.03:172,9,0	./.	1/1:4,3:7:9.03:174,9,0	0/1:6,0:6:0:0,0,0	./.	1/1:3,4:7:12:133,12,0	1/1:2,3:5:6.02:116,6,0	1/1:7,3:10:6.02:105,6,0	1/1:6,2:9:12.85:161,13,0	./.	1/1:2,5:7:3.01:58,3,0	1/1:3,2:5:9.03:173,9,0	1/1:4,4:8:12.03:199,12,0	1/1:3,5:8:9.03:173,9,0	1/1:1,3:4:6.02:116,6,0
chr10	36517394	.	A	ACTTT	25511.50	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-13.163;DP=600;FS=0.333;HRun=0;HaplotypeScore=91.5770;InbreedingCoeff=0.9983;MQ=72.21;MQ0=0;MQRankSum=-3.011;QD=62.53;ReadPosRankSum=0.438;VQSLOD=6.2286;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:90.31:0,90,1618	1/1:2,7:9:21.07:550,21,0	0/0:13,0:13:33.11:0,33,595	0/0:16,0:16:44.64:0,45,749	1/1:3,22:25:66.09:1562,66,0	0/0:22,0:22:66.18:0,66,1109	0/0:24,0:24:72.23:0,72,1274	1/1:11,23:36:90.30:2157,90,0	1/1:5,17:23:51.18:1329,51,0	0/0:20,0:20:54.19:0,54,977	0/0:14,0:14:39.13:0,39,709	1/1:1,25:26:72.25:1886,72,0	1/1:4,15:19:48.16:1236,48,0	1/1:3,26:29:72.25:1885,72,0	0/0:31,0:31:87.30:0,87,1582	1/1:2,28:30:87.30:2273,87,0	1/1:3,16:19:48.16:1257,48,0	0/0:20,0:20:57.16:0,57,1003	1/1:4,10:14:33.11:840,33,0	1/1:1,8:9:24.08:628,24,0	1/1:3,31:35:87.17:2065,87,0	1/1:5,11:16:33.07:685,33,0	1/1:1,13:14:42.14:1061,42,0	1/1:4,32:37:75.13:1926,75,0	1/1:5,7:12:24.08:589,24,0	1/1:5,18:24:66.20:1584,66,0	1/1:0,20:22:54.18:1368,54,0	1/1:1,8:9:24.08:629,24,0
chr10	36517621	.	G	GTCTA	31042.60	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-16.126;DP=708;FS=6.404;HRun=0;HaplotypeScore=103.9422;InbreedingCoeff=1.0000;MQ=84.97;MQ0=1;MQRankSum=-7.010;QD=64.27;ReadPosRankSum=3.656;VQSLOD=7.0441;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,105,1958	1/1:0,15:16:42.14:1133,42,0	0/0:22,0:22:53.52:0,54,1006	0/0:32,0:31:71.90:0,72,1065	1/1:3,25:30:69.24:1850,69,0	0/0:18,0:18:54.19:0,54,1011	0/0:23,0:23:69.24:0,69,1310	1/1:13,25:42:99:2514,105,0	1/1:3,15:19:42.14:1132,42,0	0/0:32,0:32:87.29:0,87,1618	0/0:21,0:21:63.20:0,63,1153	1/1:1,21:22:60.21:1607,60,0	1/1:3,19:23:63.22:1661,63,0	1/1:2,18:20:48.16:1286,48,0	0/0:21,0:21:60.19:0,60,1106	1/1:6,26:32:75.26:2008,75,0	1/1:4,19:24:48.16:1294,48,0	0/0:21,0:21:57.13:0,57,1010	1/1:4,14:19:45.15:1060,45,0	1/1:4,34:38:90.31:2428,90,0	1/1:2,37:39:90.04:2429,90,0	1/1:2,19:21:51.18:1374,51,0	1/1:2,14:16:36.12:969,36,0	1/1:1,17:19:42.14:1122,42,0	1/1:2,22:24:57.20:1536,57,0	1/1:6,27:33:87.24:2201,87,0	1/1:0,24:25:69.24:1860,69,0	1/1:1,20:21:60.21:1577,60,0
chr10	36518750	.	T	TTAAG	29933.48	PASS	AB=0.610;AC=37;AF=0.661;AN=56;BaseQRankSum=0.581;DP=697;FS=22.951;HRun=0;HaplotypeScore=177.8247;InbreedingCoeff=0.9199;MQ=62.23;MQ0=0;MQRankSum=-14.243;QD=64.10;ReadPosRankSum=-2.207;VQSLOD=3.7015;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:78.27:0,78,1456	1/1:0,15:15:45.15:1197,45,0	0/0:18,0:18:48.11:0,48,800	0/0:17,0:16:27.76:0,28,521	1/1:8,23:31:81.19:1922,81,0	0/0:24,0:24:66.21:0,66,1201	0/0:22,0:22:57.17:0,57,1004	1/1:13,20:34:84.22:1868,84,0	1/1:7,20:27:81.25:1990,81,0	0/0:36,0:36:99:0,102,1836	0/0:30,0:30:81.24:0,81,1422	1/1:8,15:23:57.13:1411,57,0	1/1:5,18:23:63.22:1640,63,0	1/1:5,13:18:54.07:1274,54,0	0/0:37,0:37:99:0,108,1976	1/1:9,19:28:69.14:1655,69,0	1/1:3,23:26:78.27:2023,78,0	0/0:18,0:17:54.14:0,54,959	1/1:4,11:15:39.13:1033,39,0	1/1:12,15:27:60.11:1381,60,0	1/1:4,12:16:38.96:861,39,0	1/1:5,20:25:69.21:1687,69,0	1/1:4,40:44:99:2823,111,0	1/1:9,18:27:72.23:1704,72,0	1/1:6,23:29:72.25:1856,72,0	0/1:9,16:25:36.78:1525,0,37	1/1:8,13:21:60.07:1447,60,0	1/1:3,8:11:24.08:639,24,0
chr10	36518813	.	T	TG	18382.67	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=5.922;DP=658;FS=0.960;HRun=0;HaplotypeScore=128.8233;InbreedingCoeff=0.9898;MQ=88.72;MQ0=0;MQRankSum=-7.735;QD=43.36;ReadPosRankSum=1.933;VQSLOD=4.2957;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:99:0,99,1381	1/1:1,3:4:9.03:143,9,0	0/0:25,0:25:66.15:0,66,818	0/0:27,0:27:78.08:0,78,984	1/1:1,28:30:84.22:1286,84,0	0/0:32,0:32:96.32:0,96,1339	0/0:25,0:25:75.23:0,75,1030	1/1:0,38:38:99:1704,114,0	1/1:1,28:29:84.22:1297,84,0	0/0:28,0:28:81.27:0,81,1117	0/0:14,0:14:42.14:0,42,587	1/1:0,20:20:54.18:837,54,0	1/1:0,26:26:75.26:1194,75,0	1/1:0,18:18:47.77:765,48,0	0/0:30,0:30:90.29:0,90,1239	1/1:0,23:23:65.75:1052,66,0	1/1:0,27:27:72.24:1139,72,0	0/0:20,0:20:57.19:0,57,794	1/1:1,15:16:45.15:700,45,0	1/1:0,15:15:45.10:678,45,0	1/1:1,35:36:99:1600,102,0	1/1:1,23:24:66.22:1045,66,0	1/1:4,8:12:30.06:410,30,0	1/1:0,37:37:99:1626,102,0	1/1:0,9:9:27.01:399,27,0	1/1:4,19:23:21.20:882,21,0	1/1:0,27:26:78.27:1243,78,0	1/1:0,9:9:24.08:383,24,0
chr10	36519106	.	A	ATT	5929.36	PASS	AB=0.656;AC=35;AF=0.625;AN=56;BaseQRankSum=5.662;DP=695;FS=3.427;HRun=12;HaplotypeScore=107.1606;InbreedingCoeff=0.5998;MQ=66.80;MQ0=0;MQRankSum=-2.331;QD=11.65;ReadPosRankSum=-2.206;VQSLOD=3.3449;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:48:99:0,117,1113	1/1:3,0:13:19.96:69,20,0	0/1:17,0:16:5.09:5,0,89	0/0:12,0:12:13.97:0,14,136	1/1:10,30:45:36.52:1103,37,0	0/0:16,0:17:35.90:0,36,380	0/0:22,0:23:59.78:0,60,539	1/1:13,0:47:62.29:341,62,0	1/1:5,18:26:49.63:610,50,0	0/0:21,0:21:47.88:0,48,487	0/0:18,0:20:37.09:0,37,327	1/1:6,0:27:16.87:112,17,0	1/1:3,1:24:18.64:163,19,0	0/1:3,0:20:19.55:68,0,20	0/0:21,0:24:35.49:0,35,474	1/1:3,21:28:47.59:617,48,0	1/1:2,23:30:69.08:876,69,0	0/0:20,0:21:47.84:0,48,482	1/1:4,1:21:6.54:90,7,0	1/1:5,1:23:21.54:235,22,0	0/1:4,0:14:7.26:40,0,7	0/1:7,0:26:20.09:95,0,20	1/1:6,2:28:24.44:205,24,0	1/1:6,1:30:0.90:151,1,0	1/1:2,1:15:23.82:145,24,0	1/1:7,9:23:21.32:470,21,0	0/1:7,0:30:33.87:126,0,34	1/1:3,14:21:32.56:408,33,0
chr10	36520125	.	CGG	C	13845.45	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-16.000;DP=639;FS=7.165;HRun=6;HaplotypeScore=139.8934;InbreedingCoeff=0.9948;MQ=75.94;MQ0=1;MQRankSum=-2.150;QD=32.58;ReadPosRankSum=2.323;VQSLOD=3.5234;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:3,0:58:99:0,127,459	1/1:2,11:13:30.10:400,30,0	0/0:16,0:14:30.06:0,30,415	0/0:16,0:16:23.04:0,23,307	1/1:2,20:22:57.19:758,57,0	0/0:1,0:20:39.93:0,40,141	0/0:0,0:22:52.40:0,52,184	1/1:6,21:27:60.19:798,60,0	1/1:2,26:28:75.24:999,75,0	0/0:3,0:16:35.19:0,35,142	0/0:3,0:15:29.94:0,30,105	1/1:3,25:28:66.22:880,66,0	1/1:0,21:21:63.21:837,63,0	1/1:3,19:22:54.18:716,54,0	0/0:3,0:21:32.32:0,32,114	1/1:3,21:24:60.19:797,60,0	1/1:5,44:49:99:1640,123,0	0/0:1,0:30:62.38:0,62,219	1/1:5,14:18:42.08:523,42,0	1/1:1,5:6:15.05:200,15,0	1/1:0,38:38:99:1320,99,0	1/1:1,16:17:39.13:520,39,0	1/1:4,8:12:17.94:239,18,0	1/1:3,26:29:59.72:799,60,0	1/1:2,20:22:57.19:760,57,0	1/1:1,21:24:47.55:780,48,0	1/1:0,17:17:45.15:598,45,0	1/1:0,7:7:21.07:280,21,0
chr10	36520667	.	CTTAG	C	10288.33	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=15.893;DP=611;FS=2.816;HRun=0;HaplotypeScore=105.0748;InbreedingCoeff=0.9945;MQ=73.02;MQ0=0;MQRankSum=-3.484;QD=42.17;ReadPosRankSum=3.526;VQSLOD=5.4554;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:57:99:0,160,4210	1/1:1,8:9:18.06:336,18,0	0/0:27,0:27:66.21:0,66,1545	0/0:19,0:18:48.16:0,48,1185	0/0:21,0:21:60.21:0,60,1592	0/0:15,0:15:45.14:0,45,1145	0/0:17,0:17:48.16:0,48,1241	1/1:3,30:25:66.20:1163,66,0	0/0:27,0:27:78.24:0,78,1945	0/0:18,0:18:54.19:0,54,1441	0/0:16,0:16:45.15:0,45,1170	1/1:1,17:18:42.14:784,42,0	1/1:1,12:13:30.10:560,30,0	1/1:1,27:28:75.26:1399,75,0	0/0:27,0:27:78.26:0,78,1998	0/0:21,0:21:63.22:0,63,1679	0/0:33,0:33:96.33:0,96,2555	0/0:21,0:21:63.22:0,63,1679	1/1:2,13:15:36.12:672,36,0	1/1:3,6:9:12.04:224,12,0	1/1:2,17:19:39.13:728,39,0	1/1:1,15:16:36.12:672,36,0	1/1:0,19:19:41.98:784,42,0	1/1:2,19:21:48.16:896,48,0	1/1:2,20:22:51.17:952,51,0	0/0:29,0:29:78.26:0,78,1999	1/1:0,22:22:60.20:1120,60,0	0/0:19,0:19:54.19:0,54,1440
chr10	36521483	.	CCCA	C	2477.60	PASS	AB=0.989;AC=29;AF=0.518;AN=56;BaseQRankSum=2.146;DP=365;FS=29.989;HRun=0;HaplotypeScore=87.6712;InbreedingCoeff=0.4877;MQ=81.37;MQ0=0;MQRankSum=-7.513;QD=13.39;ReadPosRankSum=-2.978;VQSLOD=0.9969;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:84.06:0,84,1742	1/1:6,0:6:2.45:30,2,0	0/0:24,0:20:56.98:0,57,1058	0/0:21,0:18:53.13:0,53,917	1/1:6,1:7:2.92:21,3,0	0/0:12,0:12:36.11:0,36,726	0/0:17,0:17:44.91:0,45,891	1/1:7,0:7:9.83:68,10,0	1/1:13,2:15:45.04:528,45,0	0/0:9,0:9:23.78:0,24,429	0/0:4,0:4:5.98:0,6,113	0/0:10,0:10:6.21:0,6,43	0/0:17,0:17:0.44:0,0,1	1/1:8,0:8:13.23:88,13,0	0/0:18,0:18:47.92:0,48,1009	1/1:14,1:15:34.82:429,35,0	1/1:26,3:29:61.99:835,62,0	0/0:18,0:18:54.14:0,54,1131	0/1:10,0:10:27.34:40,0,27	1/1:9,0:9:5.93:40,6,0	1/1:15,0:15:1.45:50,1,0	1/1:5,0:5:6:53,6,0	0/1:8,0:8:8.35:57,0,8	0/1:6,0:6:11.20:11,0,36	0/1:14,0:14:4.76:51,0,5	0/1:17,1:18:45.51:206,0,46	1/1:10,0:10:9.09:101,9,0	1/1:3,0:3:8.91:61,9,0
chr10	36521484	.	CCA	C	2679.11	PASS	AB=0.944;AC=36;AF=0.643;AN=56;BaseQRankSum=1.843;DP=362;FS=53.735;HRun=0;HaplotypeScore=80.8058;InbreedingCoeff=0.7117;MQ=82.66;MQ0=0;MQRankSum=-6.096;QD=12.70;ReadPosRankSum=-5.988;VQSLOD=0.3205;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:83.22:0,83,1398	1/1:6,0:6:10.42:69,10,0	0/0:25,0:21:35.23:0,35,856	0/0:21,0:18:43.13:0,43,758	1/1:4,3:7:2.95:23,3,0	0/0:12,0:12:36.11:0,36,602	0/0:16,0:16:44.85:0,45,683	1/1:9,0:9:17.77:129,18,0	1/1:11,4:15:44.98:402,45,0	0/0:8,0:8:23.87:0,24,354	0/0:4,0:4:5.98:0,6,90	0/1:10,0:10:11.15:38,0,11	1/1:18,0:18:2.60:25,3,0	1/1:8,0:8:21.72:165,22,0	0/0:17,0:17:47.93:0,48,829	1/1:8,6:14:35.05:315,35,0	1/1:18,11:29:64.48:611,64,0	0/0:18,0:18:54.15:0,54,923	1/1:9,0:9:4.35:126,4,0	1/1:8,0:8:8.90:60,9,0	1/1:16,0:16:22.74:171,23,0	1/1:5,0:5:6:53,6,0	1/1:8,0:8:13.08:97,13,0	1/1:6,0:6:8.97:71,9,0	1/1:14,0:14:17.56:120,18,0	0/1:14,2:16:26.95:177,0,27	1/1:10,0:10:22.95:171,23,0	1/1:2,1:3:8.91:61,9,0
chr10	36521485	.	CA	C	2929	PASS	AB=0.882;AC=37;AF=0.661;AN=56;BaseQRankSum=1.627;DP=360;FS=57.895;HRun=1;HaplotypeScore=73.3688;InbreedingCoeff=0.8107;MQ=82.82;MQ0=0;MQRankSum=-6.398;QD=14.01;ReadPosRankSum=-6.641;VQSLOD=-0.3707;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:82.87:0,83,1092	1/1:6,0:6:11.92:89,12,0	0/0:24,1:21:35.19:0,35,693	0/0:21,0:18:40.46:0,40,603	1/1:6,0:6:3.06:21,3,0	0/0:12,0:12:36.11:0,36,481	0/0:15,0:15:44.98:0,45,534	1/1:0,9:9:17.83:131,18,0	1/1:12,3:15:44.84:360,45,0	0/0:8,0:8:23.93:0,24,290	0/0:4,0:4:5.81:0,6,55	1/1:10,0:10:9.83:73,10,0	1/1:18,0:18:5.53:44,6,0	1/1:8,0:8:23.86:191,24,0	0/0:17,0:17:48.14:0,48,663	1/1:13,1:14:35.12:290,35,0	1/1:26,2:28:71.81:591,72,0	0/0:19,0:19:57.10:0,57,749	1/1:8,1:9:19.28:156,19,0	1/1:8,0:8:8.90:60,9,0	1/1:14,2:16:29.35:251,29,0	1/1:5,0:5:6:54,6,0	1/1:8,0:8:20.31:153,20,0	1/1:6,0:6:11.46:77,11,0	1/1:15,0:15:24.28:177,24,0	0/1:13,2:15:16.02:159,0,16	1/1:9,1:10:26.23:200,26,0	1/1:3,0:3:8.91:61,9,0
chr10	36522225	.	TA	T	9703.60	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=14.045;DP=574;FS=4.834;HRun=7;HaplotypeScore=88.5499;InbreedingCoeff=0.9688;MQ=71.27;MQ0=0;MQRankSum=-2.717;QD=24.44;ReadPosRankSum=1.992;VQSLOD=5.2236;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:81.23:0,81,992	1/1:0,7:7:20.99:200,21,0	0/0:15,0:13:30.43:0,30,309	0/0:17,0:13:26.68:0,27,255	1/1:1,34:35:87.01:842,87,0	0/0:21,0:21:60.18:0,60,740	0/0:20,0:20:51.16:0,51,642	1/1:2,27:29:73.39:748,73,0	1/1:0,18:18:51.10:514,51,0	0/0:17,0:17:51.15:0,51,624	0/0:25,0:24:69.20:0,69,853	1/1:2,12:14:36.07:363,36,0	1/1:2,26:28:69.13:696,69,0	1/1:0,14:14:42.08:424,42,0	0/0:10,0:10:24.08:0,24,302	1/1:1,19:20:51.10:515,51,0	1/1:3,19:22:57.11:575,57,0	0/0:24,0:24:60.19:0,60,752	1/1:6,13:19:39.05:387,39,0	1/1:0,34:34:93.17:935,93,0	1/1:0,6:6:18.04:182,18,0	1/1:1,20:21:54.06:533,54,0	1/1:0,26:26:75.11:747,75,0	1/1:1,9:10:24.04:242,24,0	1/1:4,27:31:75.04:756,75,0	1/1:1,21:22:28.38:591,28,0	1/1:27,0:27:2.69:29,3,0	1/1:0,14:14:42.08:424,42,0
chr10	36522232	.	AT	A	9708.96	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=14.835;DP=576;FS=2.005;HRun=1;HaplotypeScore=90.4510;InbreedingCoeff=0.9630;MQ=70.88;MQ0=0;MQRankSum=-0.884;QD=23.97;ReadPosRankSum=2.393;VQSLOD=5.0360;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:78.23:0,78,1092	1/1:8,0:8:20.99:201,21,0	0/0:13,1:12:11.41:0,11,336	0/0:13,0:11:24.02:0,24,252	1/1:35,0:35:87.01:843,87,0	0/0:20,0:20:60.17:0,60,818	0/0:18,0:18:54.17:0,54,753	1/1:33,0:33:73.50:749,73,0	1/1:21,0:21:51.10:515,51,0	0/0:21,0:21:63.18:0,63,840	0/0:25,0:25:75.20:0,75,1013	1/1:13,0:13:36.07:363,36,0	1/1:26,0:26:69.14:696,69,0	1/1:15,0:15:42.08:424,42,0	0/0:9,0:9:27.08:0,27,367	1/1:19,0:19:51.10:515,51,0	1/1:19,0:19:57.11:575,57,0	0/0:22,0:22:66.13:0,66,879	1/1:19,0:19:39.06:388,39,0	1/1:34,0:34:93.18:935,93,0	1/1:6,0:6:18.04:182,18,0	1/1:22,0:22:54.06:534,54,0	1/1:26,0:26:75.11:747,75,0	1/1:11,0:11:24.05:242,24,0	1/1:29,0:29:75.15:756,75,0	1/1:26,0:25:23.19:586,23,0	1/1:3,26:29:2.70:36,3,0	1/1:14,0:14:42.08:424,42,0
chr10	36522793	.	C	CT	13858.27	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-11.227;DP=584;FS=4.003;HRun=4;HaplotypeScore=53.8059;InbreedingCoeff=0.9698;MQ=69.39;MQ0=0;MQRankSum=-1.676;QD=34.82;ReadPosRankSum=1.401;VQSLOD=5.4259;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:96.25:0,96,1077	1/1:2,9:11:27.09:369,27,0	0/0:24,0:24:66.15:0,66,724	0/0:7,0:7:3.04:0,3,124	1/1:0,23:23:63.17:840,63,0	0/0:16,0:16:45.13:0,45,510	0/0:21,0:21:54.14:0,54,603	1/1:2,20:22:60.20:810,60,0	1/1:4,24:28:66.22:902,66,0	0/0:28,0:28:78.22:0,78,882	0/0:16,0:16:48.14:0,48,544	1/1:2,16:18:45.15:615,45,0	1/1:1,31:32:84.28:1149,84,0	1/1:1,17:18:39.13:533,39,0	0/0:22,0:22:54.15:0,54,613	1/1:1,22:23:57.19:779,57,0	1/1:2,18:20:42.14:574,42,0	0/0:18,0:18:54.15:0,54,613	1/1:1,14:15:39.13:533,39,0	1/1:1,18:19:45.15:615,45,0	1/1:0,6:6:15.05:205,15,0	1/1:2,17:19:48.16:656,48,0	1/1:2,22:24:54.18:738,54,0	1/1:1,11:12:30.10:410,30,0	1/1:1,38:39:99:1519,111,0	1/1:1,28:29:84.28:1149,84,0	1/1:2,23:25:66.22:902,66,0	1/1:2,13:15:42.13:558,42,0
chr10	36522992	.	TTCCTCTTCCTCC	T	15769.86	PASS	AB=0.990;AC=46;AF=0.821;AN=56;BaseQRankSum=-2.517;DP=573;FS=10.889;HRun=0;HaplotypeScore=294.1681;InbreedingCoeff=0.2727;MQ=60.40;MQ0=6;MQRankSum=-3.988;QD=30.68;ReadPosRankSum=8.065;VQSLOD=2.3583;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:38,0:38:99:371,0,174	1/1:12,0:12:36.01:527,36,0	0/0:32,0:23:45.51:0,46,1114	0/0:27,0:23:26.85:0,27,1001	1/1:11,4:15:36.03:466,36,0	0/1:25,0:25:99:276,0,244	1/1:34,0:34:48.75:544,49,0	1/1:18,0:16:39.11:539,39,0	1/1:16,4:20:57.16:1060,57,0	0/1:23,0:23:99:369,0,348	0/1:24,0:24:99:361,0,162	1/1:16,0:16:45.11:658,45,0	1/1:24,0:24:66.14:967,66,0	1/1:15,0:15:45.14:753,45,0	0/1:22,0:22:99:214,0,430	1/1:18,2:20:45.15:827,45,0	1/1:18,1:19:45.09:750,45,0	0/1:15,1:16:10.22:366,0,10	1/1:14,0:13:27.06:462,27,0	1/1:18,0:18:51.06:798,51,0	1/1:20,0:20:46.16:514,46,0	1/1:20,0:19:48.11:717,48,0	1/1:15,0:15:39.11:565,39,0	1/1:21,0:21:37.41:408,37,0	1/1:18,0:18:47.87:908,48,0	1/1:16,8:23:15.51:1437,16,0	1/1:13,0:13:30.07:431,30,0	1/1:9,1:10:30.07:482,30,0
chr10	36523010	.	CTCCTCTTCT	C	5707.21	PASS	AB=0.958;AC=38;AF=0.679;AN=56;BaseQRankSum=3.013;DP=518;FS=0.431;HRun=0;HaplotypeScore=266.0986;InbreedingCoeff=-0.1624;MQ=40.56;MQ0=22;MQRankSum=-3.652;QD=11.72;ReadPosRankSum=3.821;VQSLOD=3.4443;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:34,0:33:99:622,0,116	0/1:10,0:10:16.80:50,0,17	0/0:16,0:9:14.95:0,15,227	0/0:15,0:11:17.89:0,18,242	1/1:19,0:19:20.65:272,21,0	0/1:25,0:25:99:373,0,137	0/1:21,13:34:83.34:175,0,83	0/1:21,0:16:2.21:110,0,2	0/1:19,0:19:24.45:266,0,24	0/1:21,1:20:99:121,0,471	0/1:19,0:19:83.63:351,0,84	1/1:15,0:14:16.26:183,16,0	0/1:22,0:21:1.07:259,0,1	1/1:12,0:12:0.16:104,0,0	0/1:23,0:23:99:201,0,489	1/1:23,0:22:23.66:363,24,0	1/1:23,0:22:21.37:155,21,0	0/1:10,6:16:49.40:139,0,49	0/1:9,0:8:13.48:101,0,13	1/1:14,0:14:32.92:279,33,0	0/1:18,0:18:4.04:146,0,4	1/1:12,0:10:5.89:179,6,0	1/1:12,0:10:6.65:153,7,0	1/1:16,0:14:19.02:138,19,0	1/1:16,0:15:9.21:185,9,0	1/1:34,0:32:56.57:596,57,0	1/1:10,0:10:2.68:111,3,0	0/1:8,0:8:43.90:74,0,44
chr10	36523016	.	T	TTCC	14263.26	PASS	AB=0.920;AC=48;AF=0.857;AN=56;BaseQRankSum=0.637;DP=561;FS=9.003;HRun=0;HaplotypeScore=225.5914;InbreedingCoeff=0.3936;MQ=35.39;MQ0=25;MQRankSum=-1.276;QD=26.61;ReadPosRankSum=1.272;VQSLOD=3.2885;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:35,0:34:60.57:895,61,0	1/1:5,4:9:21.07:388,21,0	0/0:14,0:8:14.14:0,14,179	0/0:10,0:6:14.80:0,15,150	1/1:19,4:22:29.66:457,30,0	1/1:27,0:26:51.84:657,52,0	1/1:32,0:32:36.25:447,36,0	1/1:30,0:25:49.35:605,49,0	1/1:18,1:19:32.22:488,32,0	0/1:22,0:20:5.45:562,0,5	1/1:22,0:22:32.15:528,32,0	1/1:10,8:17:44.33:716,44,0	1/1:15,12:26:59.90:1099,60,0	1/1:5,8:13:36.58:606,37,0	1/1:22,0:21:55.82:885,56,0	0/1:21,1:21:27.88:229,0,28	1/1:21,5:25:3.53:400,4,0	0/1:15,0:15:6.06:268,0,6	0/1:8,5:12:4.57:428,0,5	1/1:12,9:21:44.83:777,45,0	1/1:14,6:20:30.64:427,31,0	1/1:10,5:13:30.02:461,30,0	1/1:7,7:11:27:420,27,0	1/1:17,6:21:44.11:461,44,0	1/1:7,8:14:36.05:664,36,0	1/1:26,5:29:2.72:836,3,0	1/1:7,5:12:26.96:431,27,0	1/1:10,0:10:9.02:128,9,0
chr10	36523019	.	TTCC	T	2995.28	PASS	AB=0.930;AC=23;AF=0.411;AN=56;BaseQRankSum=-4.133;DP=564;FS=7.954;HRun=0;HaplotypeScore=242.2574;InbreedingCoeff=-0.0247;MQ=35.48;MQ0=26;MQRankSum=-1.668;QD=7.18;ReadPosRankSum=2.824;VQSLOD=1.2525;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:33:97.98:98,0,177	0/0:9,0:9:17.26:0,17,118	0/0:13,0:6:11.79:0,12,146	0/1:8,0:5:0.82:1,0,29	1/1:8,17:24:30.91:413,31,0	0/1:25,0:26:51.96:52,0,112	0/1:28,0:31:6.36:6,0,69	0/1:27,4:25:99:159,0,151	1/1:8,9:17:9.91:349,10,0	0/1:16,0:20:5.14:5,0,340	0/1:17,0:22:45.28:77,0,45	0/0:19,0:18:43.71:0,44,301	0/0:26,0:25:55.41:0,55,373	0/0:15,0:14:24.91:0,25,160	0/0:13,0:21:37.96:0,38,380	1/1:6,15:20:33.05:469,33,0	0/1:8,18:25:7.39:301,0,7	0/1:10,1:14:44.57:53,0,45	0/1:18,0:17:19.57:20,0,142	0/1:21,0:21:58.68:59,0,116	0/1:20,1:20:8.04:203,0,8	0/0:16,0:14:23.56:0,24,126	0/1:14,0:11:16.21:16,0,42	0/1:24,1:23:69.72:97,0,70	0/0:15,0:14:29.41:0,29,142	0/1:12,19:29:3.74:694,0,4	0/0:11,1:12:10.47:0,10,95	1/1:7,1:8:11.83:99,12,0
chr10	36523064	.	C	CT	8313.22	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=5.045;DP=620;FS=13.761;HRun=0;HaplotypeScore=146.1333;InbreedingCoeff=0.9904;MQ=57.68;MQ0=2;MQRankSum=-3.767;QD=39.40;ReadPosRankSum=3.167;VQSLOD=2.8593;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:34:69.30:0,69,1212	1/1:0,3:3:9.03:141,9,0	0/0:30,0:15:35.27:0,35,435	0/0:35,0:24:59.84:0,60,721	0/0:31,0:31:66.19:0,66,1032	0/0:26,0:26:72.21:0,72,989	0/0:37,1:38:22.24:0,22,736	1/1:1,12:12:24.02:307,24,0	0/0:21,0:21:60.09:0,60,757	0/0:16,0:16:45.15:0,45,627	0/0:15,0:15:36.77:0,37,458	1/1:0,17:17:48.16:752,48,0	1/1:0,16:17:48.16:763,48,0	1/1:0,14:14:42.14:669,42,0	0/0:21,0:20:57.18:0,57,779	0/0:30,0:30:81.19:0,81,1091	0/0:45,0:44:99:0,105,1409	0/0:26,0:26:60.20:0,60,834	1/1:2,8:10:30.10:478,30,0	1/1:1,12:12:36.12:573,36,0	1/1:0,30:30:60.20:955,60,0	1/1:0,18:18:51.17:810,51,0	1/1:1,10:11:30.10:478,30,0	1/1:2,34:35:72.72:1149,73,0	1/1:0,18:18:51.17:810,51,0	0/0:34,0:34:89.86:0,90,1136	1/1:0,10:10:27.09:428,27,0	0/0:7,0:7:21.04:0,21,272
chr10	36523977	.	G	GT	15644.86	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-11.064;DP=650;FS=8.086;HRun=4;HaplotypeScore=62.7913;InbreedingCoeff=0.9940;MQ=80.48;MQ0=0;MQRankSum=-2.780;QD=35.08;ReadPosRankSum=4.094;VQSLOD=5.1546;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:57.16:0,57,644	1/1:0,5:5:15.05:205,15,0	0/0:21,0:21:57.61:0,58,613	0/0:13,0:13:13.48:0,13,232	1/1:2,18:20:57.19:761,57,0	0/0:22,0:22:60.17:0,60,680	0/0:24,0:24:69.15:0,69,752	1/1:5,29:34:87.24:1126,87,0	1/1:3,19:22:54.18:737,54,0	0/0:29,0:29:75.20:0,75,836	0/0:14,0:14:42.12:0,42,475	1/1:1,18:19:48.16:656,48,0	1/1:1,30:31:78.26:1066,78,0	1/1:1,19:20:57.19:779,57,0	0/0:28,0:28:78.19:0,78,864	1/1:0,19:19:54.18:738,54,0	1/1:1,24:25:63.21:861,63,0	0/0:32,0:32:96.15:0,96,1036	1/1:3,18:21:60.16:778,60,0	1/1:2,34:37:99:1313,102,0	1/1:4,23:26:57.19:779,57,0	1/1:2,16:18:42.14:574,42,0	1/1:0,14:14:42.14:574,42,0	1/1:0,22:22:57.19:779,57,0	1/1:2,24:26:63.21:861,63,0	1/1:2,28:30:84.19:1080,84,0	1/1:0,29:30:81.27:1104,81,0	1/1:1,25:26:66.01:874,66,0
chr10	36524684	.	CTTGTTTGT	C	9397.13	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=2.687;DP=473;FS=8.697;HRun=0;HaplotypeScore=175.2133;InbreedingCoeff=0.9651;MQ=58.52;MQ0=0;MQRankSum=-8.584;QD=45.84;ReadPosRankSum=-0.294;VQSLOD=4.1070;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:33.07:0,33,1174	1/1:3,5:8:6.02:158,6,0	0/0:20,0:18:26.68:0,27,691	0/0:15,0:13:24.08:0,24,854	0/0:8,0:21:47.97:0,48,456	0/0:16,0:16:39.13:0,39,1561	0/0:10,0:10:27.09:0,27,1031	1/1:12,6:18:18.03:323,18,0	0/0:3,0:22:62.96:0,63,589	0/0:22,0:22:63.22:0,63,2592	0/0:12,0:12:33.11:0,33,1396	1/1:2,15:17:39.13:999,39,0	1/1:6,12:18:33.11:853,33,0	1/1:3,14:17:42.14:1091,42,0	0/0:14,0:14:30.10:0,30,1176	0/0:7,0:25:59.96:0,60,531	0/0:5,0:20:44.96:0,45,396	0/0:21,0:21:48.16:0,48,1774	1/1:6,9:15:27.04:543,27,0	1/1:6,16:22:45.15:1141,45,0	1/1:3,0:3:6:62,6,0	1/1:6,13:19:36.12:847,36,0	1/1:3,12:15:20.90:522,21,0	1/1:4,11:15:13.27:391,13,0	1/1:1,16:17:48.16:1223,48,0	0/0:7,0:25:59.96:0,60,577	1/1:2,19:21:48.16:1246,48,0	0/0:2,0:10:26.97:0,27,234
chr10	36524914	.	T	TGG	189.54	PASS	AB=0.591;AC=11;AF=0.196;AN=56;BaseQRankSum=-1.912;DP=499;FS=3.401;HRun=10;HaplotypeScore=117.9075;InbreedingCoeff=0.5870;MQ=72.09;MQ0=0;MQRankSum=1.051;QD=2.18;ReadPosRankSum=-1.813;VQSLOD=-0.3349;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:5,7:18:19.01:67,0,19	0/0:5,0:5:12.01:0,12,122	0/0:15,0:13:2.82:0,3,29	0/0:12,0:12:20.98:0,21,208	0/0:27,0:28:58.46:0,58,576	1/1:4,1:11:14.97:53,15,0	0/1:5,0:15:5.15:35,0,5	0/0:12,0:12:21:0,21,213	0/0:20,0:21:35.76:0,36,418	1/1:2,3:5:3.01:45,3,0	1/1:6,0:6:2.53:19,3,0	0/0:26,0:26:57.94:0,58,580	0/0:21,0:20:45.07:0,45,457	0/0:20,0:21:56.80:0,57,550	1/1:8,3:13:7.71:62,8,0	0/0:22,0:24:47.08:0,47,521	0/0:24,0:25:56.81:0,57,561	0/1:6,0:19:2.55:60,0,3	0/0:16,0:17:41.79:0,42,407	0/0:29,0:30:71.88:0,72,711	0/0:13,0:13:36.07:0,36,366	0/0:28,0:30:68.58:0,69,664	0/0:20,0:23:41.27:0,41,445	0/0:26,0:26:66.09:0,66,663	0/0:10,0:10:27.06:0,27,274	0/0:21,0:22:63.13:0,63,636	0/0:21,0:21:53.59:0,54,507	0/0:8,0:9:20.76:0,21,195
chr10	36529724	.	C	CGTGTGTGTGTGTGTGTGTGTGT	16664.51	PASS	AB=1.000;AC=48;AF=0.857;AN=56;BaseQRankSum=-0.937;DP=651;FS=6.269;HRun=0;HaplotypeScore=351.7456;InbreedingCoeff=0.4217;MQ=65.00;MQ0=5;MQRankSum=-2.992;QD=29.86;ReadPosRankSum=2.150;VQSLOD=1.6617;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:26:11.12:585,11,0	1/1:10,1:13:9.03:804,9,0	0/0:37,0:32:14.08:0,14,579	0/0:38,0:29:17.63:0,18,415	0/1:21,0:20:0:0,0,0	1/1:29,0:27:16.85:863,17,0	1/1:34,0:32:20.97:1271,21,0	1/1:12,0:10:3.64:364,4,0	1/1:21,0:20:9.89:169,10,0	1/1:28,0:26:24.08:1376,24,0	1/1:16,0:17:3.01:167,3,0	1/1:24,0:22:11.70:541,12,0	1/1:23,0:23:15.05:1072,15,0	1/1:25,0:25:11.20:384,11,0	1/1:26,0:25:3.01:207,3,0	1/1:30,0:30:15.05:704,15,0	1/1:28,1:31:27.09:2127,27,0	0/1:23,0:20:32.83:1654,0,33	1/1:17,0:16:21.07:1059,21,0	0/0:18,0:17:0.47:0,0,1	1/1:21,0:20:7.27:124,7,0	1/1:19,0:18:1.96:66,2,0	1/1:20,0:20:3:25,3,0	1/1:16,0:16:0.47:2,0,0	1/1:18,3:21:3.01:305,3,0	1/1:26,0:24:27.09:1620,27,0	1/1:23,0:22:19.84:1004,20,0	1/1:5,0:5:4.26:170,4,0
chr10	36530594	.	T	TTATC	31474.39	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=7.932;DP=652;FS=0.000;HRun=0;HaplotypeScore=206.0556;InbreedingCoeff=0.9468;MQ=85.19;MQ0=0;MQRankSum=-13.077;QD=53.71;ReadPosRankSum=7.206;VQSLOD=5.3996;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:29:69.18:1404,69,0	1/1:9,0:9:24.08:502,24,0	0/0:33,0:33:99:0,99,1916	0/0:33,0:32:81.24:0,81,1558	1/1:0,29:30:81.28:2302,81,0	1/1:22,0:22:25.33:898,25,0	1/1:17,0:17:41.96:748,42,0	1/1:27,0:27:75.12:1272,75,0	1/1:0,20:22:60.21:1733,60,0	1/1:19,0:19:51.12:981,51,0	1/1:13,0:13:11.05:545,11,0	1/1:28,0:28:69.19:1409,69,0	1/1:29,0:29:50.21:1373,50,0	1/1:35,0:37:99:1971,99,0	1/1:30,0:30:75.21:1477,75,0	1/1:0,29:30:87.30:2513,87,0	1/1:1,27:31:63.22:1760,63,0	1/1:9,0:9:24.04:429,24,0	1/1:19,0:19:57.04:974,57,0	1/1:13,0:13:36.12:754,36,0	1/1:34,0:34:33.53:944,34,0	1/1:11,0:11:9.12:571,9,0	1/1:33,0:33:72.25:1484,72,0	1/1:23,0:23:19.40:719,19,0	1/1:18,0:18:41.01:866,41,0	1/1:2,24:28:81.25:2193,81,0	1/1:16,0:16:42.14:874,42,0	1/1:0,9:9:27.09:780,27,0
chr10	36530595	.	C	CA	8982.19	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=11.460;DP=591;FS=14.269;HRun=0;HaplotypeScore=230.3461;InbreedingCoeff=0.8085;MQ=89.53;MQ0=0;MQRankSum=-9.481;QD=17.14;ReadPosRankSum=11.152;VQSLOD=3.4878;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:5,22:27:51.19:562,51,0	1/1:1,7:8:5.49:165,5,0	0/0:33,0:33:96.02:0,96,1269	0/0:34,0:33:84.23:0,84,1101	1/1:30,0:30:64.85:305,65,0	1/1:4,16:20:28.75:406,29,0	1/1:3,11:14:12.84:229,13,0	1/1:5,10:15:18.18:292,18,0	1/1:21,0:21:54.56:243,55,0	1/1:3,16:19:51.07:504,51,0	1/1:5,6:11:22.74:178,23,0	1/1:6,21:27:48.19:538,48,0	1/1:6,20:26:46.27:521,46,0	1/1:7,26:33:50.40:652,50,0	1/1:8,21:29:55.99:582,56,0	1/1:30,0:30:79.23:348,79,0	1/1:27,1:28:36.24:251,36,0	1/1:3,6:9:4.64:152,5,0	1/1:1,10:11:20.06:293,20,0	1/1:1,12:13:20.51:310,21,0	1/1:10,21:31:33.71:379,34,0	1/1:3,7:10:26.90:219,27,0	1/1:1,24:25:44.72:512,45,0	1/1:3,17:20:6.38:189,6,0	1/1:5,12:17:39:355,39,0	1/1:25,1:26:70.78:359,71,0	1/1:2,13:15:10.08:318,10,0	1/1:9,0:9:25.16:121,25,0
chr10	36530596	.	T	TCCA	22334.51	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=10.233;DP=630;FS=0.000;HRun=0;HaplotypeScore=213.1480;InbreedingCoeff=0.9967;MQ=88.42;MQ0=0;MQRankSum=-12.391;QD=39.81;ReadPosRankSum=5.689;VQSLOD=5.4706;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,21:32:84.18:1345,84,0	1/1:2,7:9:24.01:383,24,0	0/0:35,0:35:93.98:0,94,1711	0/0:33,0:33:66.23:0,66,1391	1/1:33,0:33:81.27:1184,81,0	1/1:3,16:19:51.09:802,51,0	1/1:4,11:15:38.34:584,38,0	1/1:7,10:17:38.86:636,39,0	1/1:23,0:23:66.22:959,66,0	1/1:3,15:19:54.17:910,54,0	1/1:7,6:13:30.07:433,30,0	1/1:6,20:27:69.18:1149,69,0	1/1:8,20:28:66.14:1111,66,0	1/1:8,25:35:99:1545,99,0	1/1:11,20:31:81.16:1238,81,0	1/1:32,0:32:90.30:1312,90,0	1/1:31,1:32:75.25:1157,75,0	1/1:3,6:9:27.04:396,27,0	1/1:1,10:11:32.90:578,33,0	1/1:2,12:14:39.07:657,39,0	1/1:13,20:33:54.59:854,55,0	1/1:4,7:11:27.07:425,27,0	1/1:1,24:25:66.21:1116,66,0	1/1:6,17:23:32.75:469,33,0	1/1:5,11:16:39.12:662,39,0	1/1:29,1:30:90.27:1298,90,0	1/1:2,13:15:45.07:733,45,0	1/1:9,0:9:27.09:398,27,0
chr10	36530738	.	TA	T	10615.20	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=18.510;DP=637;FS=3.877;HRun=2;HaplotypeScore=91.0710;InbreedingCoeff=0.9996;MQ=87.74;MQ0=0;MQRankSum=-1.961;QD=39.03;ReadPosRankSum=3.691;VQSLOD=5.2143;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,120,1911	1/1:0,11:11:30.10:419,30,0	0/0:28,0:27:66.78:0,67,994	0/0:24,1:25:36.22:0,36,839	0/0:25,0:25:75.26:0,75,1186	0/0:16,0:16:45.15:0,45,718	0/0:23,0:23:69.24:0,69,1100	1/1:0,31:31:90.12:1176,90,0	0/0:22,0:22:57.16:0,57,860	0/0:20,0:20:60.20:0,60,954	0/0:13,0:13:39.11:0,39,590	1/1:0,26:26:72.24:1005,72,0	1/1:0,28:28:81.27:1130,81,0	1/1:0,28:28:78.26:1087,78,0	0/0:24,0:24:72.23:0,72,1123	0/0:31,0:31:93.30:0,93,1448	0/0:34,0:34:90.31:0,90,1435	0/0:17,0:17:45.15:0,45,710	1/1:0,18:18:54.15:733,54,0	1/1:0,14:15:45.15:624,45,0	1/1:0,27:27:78.26:1087,78,0	1/1:1,10:11:27.09:377,27,0	1/1:0,11:11:30.10:419,30,0	1/1:1,23:24:63.18:880,63,0	1/1:0,12:12:36.12:503,36,0	0/0:33,0:33:99:0,99,1550	1/1:0,30:30:84.28:1173,84,0	0/0:11,0:11:33.11:0,33,527
chr10	36530985	.	GACAC	G	1332.43	PASS	AB=0.882;AC=34;AF=0.850;AN=40;BaseQRankSum=2.385;DP=552;FS=16.588;HRun=0;HaplotypeScore=102.7228;InbreedingCoeff=-0.0654;MQ=70.27;MQ0=12;MQRankSum=-0.670;QD=3.46;ReadPosRankSum=-1.387;VQSLOD=0.8321;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:29:27.65:44,0,28	./.	./.	./.	1/1:16,0:20:6:52,6,0	1/1:24,4:28:1.64:43,2,0	1/1:24,1:25:8.74:100,9,0	./.	1/1:14,0:22:9:81,9,0	./.	1/1:5,4:8:6.02:92,6,0	1/1:15,1:16:3.48:47,3,0	1/1:16,0:19:3:28,3,0	0/0:15,0:14:0:0,0,0	1/1:15,3:19:6.01:74,6,0	1/1:12,0:20:15.02:139,15,0	./.	0/1:15,2:19:10.91:108,0,11	./.	1/1:19,0:20:3:28,3,0	0/1:24,2:24:15.93:40,0,16	1/1:22,0:22:4.82:32,5,0	0/1:11,2:13:0:0,0,0	1/1:21,16:37:9.13:393,9,0	./.	1/1:21,0:21:6.01:56,6,0	1/1:14,0:14:3.01:46,3,0	1/1:3,0:5:3:28,3,0
chr10	36531351	.	G	GTT	4940.88	PASS	AB=0.852;AC=46;AF=0.821;AN=56;BaseQRankSum=-3.763;DP=475;FS=10.587;HRun=12;HaplotypeScore=70.1996;InbreedingCoeff=0.1782;MQ=67.29;MQ0=3;MQRankSum=-0.656;QD=11.10;ReadPosRankSum=4.191;VQSLOD=2.2624;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:24:31.24:35,0,31	1/1:0,0:6:12.95:44,13,0	0/0:10,0:6:5.89:0,6,40	0/0:18,0:12:18.33:0,18,153	1/1:4,16:22:48.11:611,48,0	0/1:12,0:12:3.80:59,0,4	0/1:8,0:8:9.16:21,0,9	1/1:8,1:26:40.53:182,41,0	1/1:4,6:10:15.05:210,15,0	1/1:9,0:8:10.75:116,11,0	1/1:16,0:16:0.96:108,1,0	1/1:2,0:14:22.33:78,22,0	1/1:3,0:20:32.44:112,32,0	1/1:3,0:16:22.46:78,22,0	0/1:11,0:11:28.42:61,0,28	1/1:3,15:20:38.57:481,39,0	1/1:8,28:37:39.12:773,39,0	1/1:16,0:16:9.01:103,9,0	1/1:6,0:21:7.80:128,8,0	0/1:4,0:23:8.56:92,0,9	1/1:2,0:11:17.47:60,17,0	1/1:3,0:4:2.50:9,2,0	1/1:3,1:8:3.82:59,4,0	1/1:3,0:7:4.99:17,5,0	0/1:6,0:27:7.85:86,0,8	1/1:3,22:27:62.12:723,62,0	1/1:4,0:27:42.42:147,42,0	1/1:3,13:17:39.13:545,39,0
chr10	36534457	.	T	TCAGACAGA	6362.62	PASS	AB=1.000;AC=46;AF=0.852;AN=54;BaseQRankSum=3.135;DP=629;FS=1.420;HRun=0;HaplotypeScore=178.7040;InbreedingCoeff=0.4818;MQ=67.18;MQ0=2;MQRankSum=0.098;QD=11.63;ReadPosRankSum=4.528;VQSLOD=3.7112;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:16,26:42:6.02:171,6,0	1/1:6,0:6:9:100,9,0	0/0:28,0:26:36.07:0,36,505	0/0:32,0:28:53.40:0,53,886	1/1:13,0:12:7.78:49,8,0	1/1:22,0:22:15.98:329,16,0	1/1:28,0:27:18.96:241,19,0	1/1:24,0:24:39.02:487,39,0	1/1:25,0:25:2.47:24,2,0	1/1:15,17:32:36.73:665,37,0	./.	1/1:27,0:27:26.21:377,26,0	1/1:13,0:13:13.38:44,13,0	1/1:23,0:23:17.05:299,17,0	1/1:18,0:18:30.04:574,30,0	1/1:26,0:26:6.46:51,6,0	0/1:20,0:19:17.98:18,0,45	0/1:20,0:20:9.91:553,0,10	1/1:24,0:23:34.40:501,34,0	1/1:16,0:13:11.88:150,12,0	1/1:26,0:26:6.01:74,6,0	1/1:25,0:23:29.30:418,29,0	1/1:19,0:17:29.32:410,29,0	1/1:37,0:37:2.19:306,2,0	1/1:21,0:20:24.54:364,25,0	1/1:25,0:25:19.61:159,20,0	1/1:15,0:15:0.47:1,0,0	0/0:12,0:12:3.37:0,3,9
chr10	36534492	.	GGC	G	4447.77	PASS	AB=0.983;AC=47;AF=0.870;AN=54;BaseQRankSum=4.114;DP=533;FS=5.617;HRun=0;HaplotypeScore=135.5900;InbreedingCoeff=0.2359;MQ=44.90;MQ0=22;MQRankSum=3.577;QD=9.19;ReadPosRankSum=1.431;VQSLOD=4.4129;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:30:8.34:57,8,0	1/1:0,6:6:6.01:71,6,0	0/0:15,0:5:0.16:0,0,48	0/0:21,0:9:16.23:0,16,140	1/1:1,0:11:3:25,3,0	1/1:19,2:20:24.74:251,25,0	0/1:28,0:25:26:26,0,35	1/1:1,27:28:80.29:587,80,0	1/1:0,19:19:6.02:96,6,0	0/1:18,1:19:42.96:151,0,43	./.	1/1:20,1:22:31.92:233,32,0	1/1:15,4:19:39.90:336,40,0	1/1:18,3:21:19.08:131,19,0	1/1:17,0:16:20.44:143,20,0	1/1:0,20:20:12.04:186,12,0	1/1:1,17:17:9.03:141,9,0	0/1:20,0:19:59.93:179,0,60	1/1:18,0:14:41.89:348,42,0	1/1:16,2:13:11.99:101,12,0	1/1:2,15:15:2.99:23,3,0	1/1:22,2:20:32.92:288,33,0	1/1:10,3:12:22.18:162,22,0	1/1:26,2:29:20.70:187,21,0	1/1:18,2:17:20.99:180,21,0	1/1:17,1:17:30.84:365,31,0	1/1:1,15:15:9.03:138,9,0	1/1:0,0:10:3.01:42,3,0
chr10	36534499	.	A	AGG	522.42	PASS	AB=0.914;AC=18;AF=0.333;AN=54;BaseQRankSum=5.977;DP=528;FS=1.657;HRun=0;HaplotypeScore=147.5168;InbreedingCoeff=0.2885;MQ=42.73;MQ0=30;MQRankSum=-1.881;QD=2.28;ReadPosRankSum=-1.852;VQSLOD=2.4729;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:28:9.41:90,9,0	0/0:5,0:5:2.90:0,3,16	0/0:12,0:3:8.90:0,9,105	0/0:18,0:6:15.05:0,15,222	0/0:11,0:11:3.01:0,3,37	0/1:21,0:18:27.44:121,0,27	0/1:12,12:22:24.88:25,0,62	0/0:22,0:22:51.56:0,52,519	0/0:22,0:22:0.47:0,0,2	0/1:18,0:18:76.47:76,0,209	./.	0/0:21,0:21:5.36:0,5,39	0/0:20,0:20:17.77:0,18,373	0/0:22,0:22:7.40:0,7,65	1/1:17,0:16:5.26:206,5,0	1/1:22,0:22:5.63:22,6,0	0/0:21,0:19:1.58:0,2,27	0/1:21,0:19:70.98:71,0,191	0/0:18,0:13:19.15:0,19,188	0/0:20,0:14:5.91:0,6,40	1/1:20,0:17:0.47:1,0,0	0/0:23,0:18:3.93:0,4,14	0/0:13,0:11:6.48:0,6,26	1/1:29,0:28:0.22:8,0,0	0/0:20,0:16:4.46:0,4,12	0/0:18,0:16:34.93:0,35,482	1/1:16,0:15:8.13:45,8,0	1/1:11,0:11:1.55:4,2,0
chr10	36535553	.	TTC	T	218.48	PASS	AB=0.961;AC=15;AF=0.288;AN=52;BaseQRankSum=6.348;DP=557;FS=16.229;HRun=0;HaplotypeScore=96.8130;InbreedingCoeff=0.1684;MQ=66.27;MQ0=11;MQRankSum=-4.474;QD=1.01;ReadPosRankSum=1.070;VQSLOD=0.5416;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:17,0:17:2.33:2,0,228	1/1:11,0:11:8.02:34,8,0	0/0:17,0:11:1.25:0,1,3	./.	0/0:22,0:23:14.75:0,15,122	0/0:32,1:32:9.01:0,9,417	0/1:19,2:21:6.01:6,0,300	0/0:34,0:33:8.07:0,8,29	0/1:17,2:19:36.10:36,0,258	0/0:23,0:23:26.85:0,27,289	0/0:15,0:15:12.03:0,12,157	0/0:24,0:25:27.47:0,27,250	0/1:21,0:21:2.57:20,0,3	1/1:22,0:22:11.36:56,11,0	0/1:19,2:20:43.07:43,0,203	0/0:8,0:17:17.97:0,18,155	0/0:14,0:15:23.96:0,24,279	0/1:10,1:11:21.10:21,0,95	0/1:22,0:22:22.65:25,0,23	0/1:14,0:14:13.20:13,0,15	0/0:15,0:15:2.97:0,3,20	./.	0/0:19,0:18:5.99:0,6,49	0/0:16,0:16:23.56:0,24,346	0/1:18,0:18:1.90:2,0,25	0/0:20,0:28:18.17:0,18,376	1/1:20,0:20:9.80:112,10,0	0/0:19,0:19:17.89:0,18,212
chr10	36535580	.	TCTCTCTCTCTCTCC	T	2426.10	PASS	AB=0.976;AC=14;AF=0.250;AN=56;BaseQRankSum=4.546;DP=597;FS=0.000;HRun=0;HaplotypeScore=209.3849;InbreedingCoeff=0.1601;MQ=56.01;MQ0=18;MQRankSum=-2.796;QD=10.07;ReadPosRankSum=-0.137;VQSLOD=1.9261;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:25:51.05:0,51,1857	1/1:9,0:9:9.03:187,9,0	0/0:23,0:11:13.15:0,13,180	0/1:34,0:7:14.74:15,0,80	0/0:22,0:22:51.08:0,51,1749	0/0:39,0:38:99:0,103,3553	0/0:22,0:22:48.14:0,48,2048	0/1:29,0:27:53.28:263,0,53	0/0:15,0:15:39.59:0,40,1776	0/0:20,0:20:59.95:0,60,2297	0/0:18,0:18:36.99:0,37,1330	0/0:23,0:22:13.73:0,14,1997	1/1:22,1:23:3.94:233,4,0	1/1:23,0:23:15.05:304,15,0	0/0:26,0:25:69.16:0,69,2259	0/0:23,0:22:45.39:0,45,1593	0/0:18,0:17:42.96:0,43,1735	0/0:14,0:14:42:0,42,1213	0/1:16,1:16:80.20:300,0,80	0/1:26,0:26:76.81:141,0,77	0/1:11,1:12:53.74:62,0,54	0/0:5,0:5:3.01:0,3,38	0/0:15,0:14:16.39:0,16,417	0/1:20,0:20:20.71:21,0,1808	0/1:16,0:16:17.74:53,0,18	0/0:31,0:31:84.14:0,84,3062	0/1:30,2:32:99:1011,0,107	0/0:15,0:13:36.12:0,36,1437
chr10	36535582	.	TCTCTCTCTCTCC	T	4391.92	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=3.466;DP=595;FS=3.852;HRun=0;HaplotypeScore=187.3099;InbreedingCoeff=0.6278;MQ=56.15;MQ0=16;MQRankSum=-5.201;QD=15.52;ReadPosRankSum=-1.189;VQSLOD=3.8182;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:25:46.49:0,46,1582	1/1:0,9:9:9.03:325,9,0	0/0:22,0:11:13.13:0,13,163	0/1:37,0:10:21.92:22,0,70	0/0:23,0:23:54.08:0,54,1517	0/0:38,0:38:99:0,106,3044	0/0:20,0:20:45.14:0,45,1634	1/1:27,0:25:44.70:599,45,0	0/0:15,0:15:42.59:0,43,1478	0/0:20,0:20:59.26:0,59,1984	0/0:18,0:18:33.90:0,34,1086	0/1:24,0:23:8.26:8,0,1629	1/1:2,19:21:12.04:337,12,0	1/1:2,20:22:14.08:454,14,0	0/0:27,0:26:65.03:0,65,1800	0/0:24,0:23:45.72:0,46,1375	0/0:18,0:17:39.54:0,40,1458	0/0:14,0:14:41.96:0,42,994	1/1:7,11:17:27.10:532,27,0	1/1:1,24:25:19.83:318,20,0	0/1:12,0:12:2.24:110,0,2	1/1:5,0:5:1.82:5,2,0	0/1:14,0:13:5.55:6,0,261	0/1:20,0:20:23.79:24,0,1441	1/1:3,13:16:9.03:174,9,0	0/0:30,0:30:78.22:0,78,2555	1/1:26,7:33:65.33:1479,65,0	0/0:15,0:13:36.08:0,36,1147
chr10	36535709	.	G	GTCTA	9130.17	PASS	AB=0.688;AC=31;AF=0.596;AN=52;BaseQRankSum=-11.000;DP=697;FS=2.203;HRun=0;HaplotypeScore=133.3069;InbreedingCoeff=0.6438;MQ=58.83;MQ0=3;MQRankSum=-0.090;QD=19.63;ReadPosRankSum=-1.702;VQSLOD=4.2212;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:22,14:36:24.08:565,24,0	1/1:4,6:10:12.04:283,12,0	./.	./.	0/0:29,0:29:45.15:0,45,692	0/1:10,17:27:13.48:665,0,13	0/1:12,3:14:10.89:200,0,11	1/1:51,0:51:35.82:413,36,0	0/0:11,0:27:36.03:0,36,332	0/0:11,0:31:45.22:0,45,432	0/0:11,0:25:33.04:0,33,307	1/1:12,10:24:18.06:421,18,0	1/1:11,12:22:27.09:634,27,0	0/1:16,7:23:34.56:199,0,35	1/1:7,10:18:21.07:494,21,0	0/0:4,0:19:26.93:0,27,234	0/0:12,0:24:21.71:0,22,198	1/1:19,17:37:33.11:738,33,0	1/1:9,5:14:18.03:375,18,0	0/1:9,21:31:7.48:809,0,7	0/1:8,0:18:0:0,0,0	1/1:13,0:24:10.89:162,11,0	1/1:18,17:35:41.95:987,42,0	1/1:13,6:19:6.02:141,6,0	1/1:9,15:24:36.12:848,36,0	0/0:29,0:29:48.11:0,48,660	1/1:13,20:33:51.18:1198,51,0	0/0:11,0:25:21.02:0,21,195
chr10	36535870	.	G	GTCTA	3802.98	PASS	AB=0.868;AC=31;AF=0.596;AN=52;BaseQRankSum=-4.854;DP=592;FS=3.723;HRun=0;HaplotypeScore=134.8816;InbreedingCoeff=0.3822;MQ=54.76;MQ0=5;MQRankSum=-0.226;QD=9.48;ReadPosRankSum=-0.085;VQSLOD=3.1376;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:29:3.66:34,4,0	1/1:6,2:8:14.97:237,15,0	./.	./.	0/0:22,0:22:30.06:0,30,396	0/1:8,0:21:42.60:43,0,101	1/1:11,0:11:3:27,3,0	1/1:47,0:45:6.87:41,7,0	0/0:20,0:20:33.07:0,33,441	0/0:15,0:32:16.99:0,17,135	0/1:12,0:24:24.23:24,0,44	1/1:12,1:25:18.06:315,18,0	1/1:19,0:23:3.01:63,3,0	1/1:13,6:19:6.02:140,6,0	0/1:6,0:17:0.25:0,0,122	0/0:23,0:23:36.09:0,36,504	0/0:26,0:26:23.91:0,24,308	0/1:9,0:11:31.83:32,0,36	1/1:17,0:16:12.03:221,12,0	1/1:15,14:29:24.08:546,24,0	1/1:7,9:16:12.04:280,12,0	1/1:3,4:7:6.02:140,6,0	0/1:11,11:22:18.84:532,0,19	1/1:5,8:13:9.03:210,9,0	0/1:12,7:19:34.01:183,0,34	0/0:22,0:24:39.07:0,39,497	0/1:22,20:42:1.14:735,0,1	0/0:20,0:20:20.98:0,21,216
chr10	36538395	.	CA	C	2280.94	PASS	AB=0.782;AC=36;AF=0.643;AN=56;BaseQRankSum=1.359;DP=494;FS=14.165;HRun=15;HaplotypeScore=83.5457;InbreedingCoeff=0.7324;MQ=53.05;MQ0=20;MQRankSum=-2.084;QD=6.81;ReadPosRankSum=2.305;VQSLOD=1.2042;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:26:29:0,29,183	1/1:9,7:16:1.56:112,2,0	0/1:6,0:6:1.67:2,0,29	0/0:12,0:7:15.15:0,15,96	1/1:8,0:26:35.79:104,36,0	0/0:16,0:23:35.04:0,35,243	0/0:10,0:12:16.72:0,17,98	1/1:8,7:17:10.19:176,10,0	1/1:3,0:14:21.24:61,21,0	0/0:8,0:22:43.02:0,43,230	0/0:8,0:19:37.29:0,37,212	1/1:7,6:13:27.37:170,27,0	1/1:8,5:14:21.55:119,22,0	0/1:9,5:14:2.83:108,0,3	0/0:5,0:20:25.70:0,26,134	1/1:10,1:14:11.05:43,11,0	1/1:4,1:16:23.49:79,23,0	0/0:15,0:19:26.41:0,26,173	0/1:12,9:21:13.24:163,0,13	1/1:5,13:18:24.95:240,25,0	1/1:5,7:12:15.58:107,16,0	0/1:12,8:17:0.20:114,0,0	1/1:5,14:19:37.39:231,37,0	1/1:11,9:15:23.54:150,24,0	1/1:10,7:19:28.71:158,29,0	1/1:3,0:12:19.65:56,20,0	1/1:6,11:18:17.05:229,17,0	1/1:8,1:13:17.17:61,17,0
chr10	36538449	.	A	ATTT	9179.18	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=2.342;DP=495;FS=4.624;HRun=9;HaplotypeScore=92.7974;InbreedingCoeff=0.9630;MQ=75.05;MQ0=0;MQRankSum=-3.735;QD=26.45;ReadPosRankSum=-1.025;VQSLOD=3.3536;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:60.18:0,60,756	1/1:3,9:14:33.07:538,33,0	0/0:17,0:16:30.05:0,30,356	0/0:12,0:10:20.33:0,20,224	1/1:5,0:31:26.67:61,27,0	0/0:20,0:20:54.17:0,54,682	0/0:16,0:16:42.09:0,42,531	1/1:11,15:28:57.10:949,57,0	1/1:3,0:12:11.27:25,11,0	0/0:19,0:19:51.15:0,51,644	0/0:10,0:10:27.08:0,27,341	1/1:1,0:14:41.85:324,42,0	1/1:4,11:16:33.11:615,33,0	1/1:2,11:17:32.90:500,33,0	0/0:15,0:15:36.12:0,36,455	1/1:0,0:12:9.04:21,9,0	1/1:3,0:18:10.87:30,11,0	0/0:15,0:15:30.08:0,30,379	1/1:11,13:25:48.13:860,48,0	1/1:3,16:23:60.16:1034,60,0	1/1:2,8:10:21.07:410,21,0	1/1:1,21:24:72.20:1328,72,0	1/1:2,0:18:40.10:301,40,0	1/1:0,2:12:29.93:302,30,0	1/1:4,13:19:36.12:673,36,0	1/1:2,0:24:29.65:68,30,0	1/1:4,19:25:63.17:1109,63,0	1/1:1,0:4:6.73:32,7,0
chr10	36539204	.	AAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG	A	5178.88	PASS	AC=12;AF=0.222;AN=54;BaseQRankSum=8.662;DP=545;FS=8.057;HRun=0;HaplotypeScore=335.7804;InbreedingCoeff=0.8752;MQ=63.55;MQ0=6;MQRankSum=-4.612;QD=37.26;ReadPosRankSum=0.802;VQSLOD=2.2548;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:17:24.08:0,24,2394	0/0:10,0:10:26.45:0,26,2814	./.	0/0:19,0:9:0.47:0,0,1	1/1:12,20:32:33.08:1805,33,0	0/0:14,0:21:30.87:0,31,1827	0/0:11,0:11:21.07:0,21,1686	0/0:35,0:34:45.15:0,45,3042	1/1:12,12:24:15.05:1155,15,0	0/0:21,0:23:45.15:0,45,3785	0/0:22,0:27:25.33:0,25,2544	0/0:14,0:20:26.08:0,26,1881	0/0:11,0:12:21.07:0,21,2055	0/0:15,0:15:24.07:0,24,2065	0/0:14,0:22:36.12:0,36,3041	1/1:8,8:16:12.04:924,12,0	1/1:9,9:18:6.02:240,6,0	0/0:9,0:8:9.03:0,9,756	0/0:18,0:18:33.11:0,33,2911	0/0:33,0:33:39.03:0,39,3118	0/0:8,0:8:12.04:0,12,1238	0/0:14,0:15:29.82:0,30,2919	0/0:14,0:17:30.10:0,30,2171	0/0:12,0:17:18.51:0,19,857	0/0:10,0:10:18.06:0,18,1957	1/1:19,11:30:28.32:824,28,0	0/0:21,0:27:54.19:0,54,4560	1/1:10,9:17:3:231,3,0
chr10	36540397	.	A	ATGTGTATAGCCT	67330.01	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-5.251;DP=621;FS=30.015;HRun=0;HaplotypeScore=164.9147;InbreedingCoeff=0.9590;MQ=63.30;MQ0=2;MQRankSum=-10.597;QD=117.10;ReadPosRankSum=3.248;VQSLOD=3.4489;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,13:17:33.11:1935,33,0	1/1:1,4:5:12.04:739,12,0	0/0:17,0:17:48.16:0,48,1556	0/0:29,0:29:87.30:0,87,2928	1/1:5,18:24:30.10:1626,30,0	1/1:2,17:24:51.18:2856,51,0	1/1:3,15:20:39.13:2227,39,0	1/1:10,26:38:99:5583,108,0	1/1:3,28:36:81.28:4723,81,0	1/1:3,25:34:99:4994,100,0	1/1:2,15:20:30.10:1795,30,0	1/1:1,26:34:72.04:4174,72,0	1/1:3,21:26:60.21:3400,60,0	1/1:4,28:35:72.25:3788,72,0	1/1:3,22:29:54.18:3072,54,0	1/1:3,18:24:57.02:3278,57,0	1/1:2,7:10:21.07:1222,21,0	1/1:0,5:5:15.05:939,15,0	1/1:2,8:13:36.11:1817,36,0	1/1:3,21:28:57.19:3166,57,0	1/1:3,8:14:30.10:1787,30,0	1/1:3,16:20:33.11:1853,33,0	1/1:2,25:31:47.84:2733,48,0	1/1:0,14:14:13.95:839,14,0	1/1:1,14:18:33.11:2036,33,0	1/1:7,17:26:78.27:3911,78,0	1/1:2,12:21:27.09:1696,27,0	1/1:0,6:6:18.06:1142,18,0
chr10	36541662	.	T	TA	7693.21	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-16.105;DP=728;FS=0.951;HRun=8;HaplotypeScore=66.4687;InbreedingCoeff=0.9993;MQ=82.44;MQ0=0;MQRankSum=-1.919;QD=30.05;ReadPosRankSum=0.888;VQSLOD=4.8509;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,123,1119	1/1:3,13:16:42.12:484,42,0	0/0:27,0:27:62.95:0,63,568	0/0:15,0:15:29.50:0,30,256	0/0:21,0:21:54.03:0,54,494	0/0:28,0:27:78.03:0,78,714	0/0:22,0:22:54.02:0,54,494	1/1:2,31:33:93.24:1043,93,0	0/0:29,0:29:87.02:0,87,787	0/0:27,0:27:75.01:0,75,678	0/0:17,0:17:48.01:0,48,435	0/0:38,0:38:90:0,90,813	1/1:1,28:29:81.24:935,81,0	1/1:2,25:27:63.19:727,63,0	0/0:32,0:32:86.99:0,87,781	0/0:30,0:30:81.04:0,81,741	0/0:27,0:27:72.02:0,72,659	0/0:22,0:22:48:0,48,433	1/1:5,11:16:36.09:400,36,0	1/1:2,25:27:75.22:865,75,0	1/1:5,16:21:48.14:554,48,0	1/1:0,24:24:72.21:831,72,0	0/0:25,0:25:63.03:0,63,577	0/0:26,0:26:66.02:0,66,604	1/1:1,21:22:60.18:692,60,0	0/0:32,0:32:87.05:0,87,796	1/1:5,36:40:99:1162,102,0	0/0:8,0:8:21.01:0,21,192
chr10	36543084	.	G	GAA	5154.02	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-13.372;DP=527;FS=1.291;HRun=8;HaplotypeScore=58.9197;InbreedingCoeff=0.9415;MQ=80.18;MQ0=0;MQRankSum=-0.458;QD=39.34;ReadPosRankSum=2.188;VQSLOD=4.7128;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:48.13:0,48,535	0/0:7,0:7:21.06:0,21,234	0/0:18,0:19:5.73:0,6,387	0/0:14,0:14:20.21:0,20,230	1/1:4,26:30:78.27:1221,78,0	0/0:20,0:20:54.11:0,54,593	0/0:12,0:12:36.10:0,36,401	0/0:26,0:26:69.14:0,69,737	1/1:2,13:15:42.11:640,42,0	0/0:29,0:29:81.21:0,81,903	0/0:24,0:24:63.16:0,63,702	0/0:16,0:16:45.11:0,45,501	0/0:17,0:17:48.11:0,48,526	0/0:14,0:14:39.09:0,39,435	0/0:17,0:17:48.13:0,48,535	1/1:1,15:16:42.14:667,42,0	1/1:3,29:32:78.27:1238,78,0	0/0:21,0:21:63.17:0,63,702	0/0:14,0:14:36.08:0,36,401	0/0:32,0:32:78.19:0,78,869	0/0:3,0:3:6:0,6,67	0/0:12,0:12:33.08:0,33,368	0/0:16,0:16:36.07:0,36,401	0/0:15,0:15:45.10:0,45,490	0/0:23,0:23:60.14:0,60,669	1/1:5,22:28:8.35:1007,8,0	0/0:28,0:28:69.17:0,69,769	1/1:2,8:10:24.08:381,24,0
chr10	36545097	.	G	GA	2824.92	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=9.607;DP=620;FS=13.457;HRun=2;HaplotypeScore=67.2954;InbreedingCoeff=0.9926;MQ=87.54;MQ0=0;MQRankSum=-9.986;QD=41.54;ReadPosRankSum=2.524;VQSLOD=2.5626;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,141,1944	0/0:7,0:7:21.07:0,21,293	0/0:23,0:23:66.22:0,66,922	0/0:24,0:24:72.19:0,72,941	1/1:0,15:15:39.13:620,39,0	0/0:16,0:16:48.16:0,48,671	0/0:25,0:25:75.22:0,75,1012	0/0:33,0:33:96.29:0,96,1290	1/1:0,16:15:39.13:621,39,0	0/0:37,0:37:99:0,102,1394	0/0:24,0:24:72.24:0,72,1003	0/0:23,0:23:66.13:0,66,875	0/0:30,0:30:90.30:0,90,1251	0/0:20,0:20:57.19:0,57,796	0/0:22,0:22:66.22:0,66,923	1/1:0,9:9:27.09:430,27,0	1/1:0,13:13:39.13:622,39,0	0/0:21,0:21:57.17:0,57,773	0/0:24,0:24:63.05:0,63,861	0/0:29,0:29:87.26:0,87,1166	0/0:24,0:24:69.21:0,69,932	0/0:22,0:22:66.20:0,66,900	0/0:28,0:28:84.28:0,84,1165	0/0:21,0:21:60.17:0,60,801	0/0:20,0:20:60.18:0,60,792	1/1:0,11:11:33.11:527,33,0	0/0:30,0:29:90.18:0,90,1210	1/1:0,4:4:12.04:191,12,0
chr10	36545111	.	GA	G	601.73	PASS	AB=0.750;AC=9;AF=0.167;AN=54;BaseQRankSum=6.043;DP=633;FS=0.776;HRun=6;HaplotypeScore=75.1836;InbreedingCoeff=0.8081;MQ=80.18;MQ0=0;MQRankSum=-3.562;QD=7.52;ReadPosRankSum=-2.794;VQSLOD=-0.1709;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,150,1889	0/0:7,0:7:21.07:0,21,276	0/0:19,0:19:51.12:0,51,634	0/0:17,0:17:42.11:0,42,535	0/1:14,7:21:6.77:114,0,7	0/0:19,0:19:48.16:0,48,632	0/0:22,0:22:66.21:0,66,868	0/0:26,0:26:66.20:0,66,845	1/1:11,4:14:9.01:97,9,0	0/0:40,0:40:99:0,117,1528	0/0:26,0:26:75.24:0,75,987	0/0:24,0:24:72.23:0,72,947	0/0:30,0:30:87.21:0,87,1106	0/0:23,0:23:60.18:0,60,771	0/0:25,0:25:63.20:0,63,828	1/1:7,3:10:9.02:97,9,0	1/1:12,3:14:3:32,3,0	0/0:22,0:22:63.19:0,63,813	0/0:25,0:25:72.22:0,72,920	0/0:31,0:31:81.26:0,81,1058	0/0:21,0:21:57.19:0,57,749	0/0:24,0:24:69.22:0,69,908	0/0:29,0:29:87.28:0,87,1142	0/0:18,0:18:51.12:0,51,652	0/0:18,0:18:51.16:0,51,667	1/1:7,12:19:38.61:409,39,0	0/0:31,0:30:87.24:0,87,1124	./.
chr10	36545280	.	A	AT	777.97	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=16.806;DP=549;FS=7.777;HRun=0;HaplotypeScore=134.7079;InbreedingCoeff=0.9211;MQ=87.90;MQ0=0;MQRankSum=-15.433;QD=4.14;ReadPosRankSum=3.266;VQSLOD=3.0551;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,120,1675	1/1:0,13:13:20.85:55,21,0	0/0:16,0:16:42.14:0,42,576	0/0:42,0:42:99:0,120,1562	0/0:25,0:25:72.23:0,72,989	0/0:25,0:25:69.23:0,69,965	0/0:22,0:22:66.22:0,66,919	1/1:0,16:16:38.23:140,38,0	0/0:16,0:16:48.15:0,48,654	0/0:23,0:23:66.22:0,66,909	0/0:15,0:15:42.13:0,42,567	1/1:3,15:18:21.60:90,22,0	1/1:2,20:22:29.22:146,29,0	1/1:1,19:20:18.02:71,18,0	0/0:23,0:23:66.22:0,66,921	0/0:18,0:18:54.18:0,54,754	0/0:30,0:30:87.26:0,87,1196	0/0:27,0:27:78.24:0,78,1071	1/1:1,11:12:27.59:117,28,0	1/1:1,15:16:20.40:88,20,0	1/1:1,5:6:4.93:12,5,0	1/1:2,17:19:14.77:63,15,0	1/1:1,7:8:1.59:23,2,0	1/1:0,9:9:1.70:4,2,0	1/1:2,9:11:13.81:59,14,0	0/0:20,0:20:60.16:0,60,802	1/1:1,17:18:31.83:126,32,0	0/0:17,0:17:51.17:0,51,711
chr10	36545281	.	G	GGT	1906.98	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=18.148;DP=550;FS=0.335;HRun=0;HaplotypeScore=141.2863;InbreedingCoeff=0.9713;MQ=89.15;MQ0=0;MQRankSum=-16.983;QD=10.20;ReadPosRankSum=4.282;VQSLOD=3.5182;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,120,1932	1/1:0,13:13:34.69:163,35,0	0/0:17,0:17:42.13:0,42,660	0/0:42,0:42:99:0,120,1816	0/0:26,0:26:72.25:0,72,1174	0/0:24,0:24:69.24:0,69,1126	0/0:23,0:23:66.20:0,66,1027	1/1:2,16:18:47.05:303,47,0	0/0:16,0:16:48.16:0,48,780	0/0:24,0:24:66.21:0,66,1034	0/0:15,0:15:42.13:0,42,657	1/1:0,15:16:30.09:128,30,0	1/1:2,20:22:56.52:283,57,0	1/1:1,19:20:48.07:180,48,0	0/0:23,0:23:69.20:0,69,1074	0/0:18,0:18:54.18:0,54,880	0/0:29,0:29:87.27:0,87,1392	0/0:27,0:27:75.26:0,75,1224	1/1:1,10:12:32.48:236,32,0	1/1:1,15:16:37.44:177,37,0	1/1:1,5:6:10.26:41,10,0	1/1:2,17:19:33.26:151,33,0	1/1:0,7:7:3.72:19,4,0	1/1:1,9:10:19.37:87,19,0	1/1:1,9:10:26.42:109,26,0	0/0:20,0:20:60.20:0,60,969	1/1:1,17:18:43.45:258,43,0	0/0:17,0:17:51.17:0,51,825
chr10	36545283	.	ACTG	A	4128.93	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=18.140;DP=550;FS=1.904;HRun=0;HaplotypeScore=144.0005;InbreedingCoeff=0.9945;MQ=91.54;MQ0=0;MQRankSum=-17.508;QD=22.20;ReadPosRankSum=4.396;VQSLOD=3.5433;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,120,2831	1/1:0,13:13:38.90:317,39,0	0/0:19,0:19:54.19:0,54,1258	0/0:43,0:44:99:0,112,2597	0/0:26,0:26:78.27:0,78,1837	0/0:24,0:24:72.25:0,72,1701	0/0:21,0:21:57.20:0,57,1348	1/1:0,18:18:54.11:573,54,0	0/0:16,0:16:48.16:0,48,1133	0/0:23,0:23:66.23:0,66,1548	0/0:14,0:14:42.14:0,42,974	1/1:0,16:16:43.92:310,44,0	1/1:1,19:20:56.62:410,57,0	1/1:0,19:19:56.56:400,57,0	0/0:22,0:22:66.23:0,66,1559	0/0:19,0:19:54.19:0,54,1274	0/0:29,0:29:84.29:0,84,1986	0/0:28,0:28:84.25:0,84,1921	1/1:0,12:13:39.06:413,39,0	1/1:0,14:14:41.59:300,42,0	1/1:2,5:7:11.91:85,12,0	1/1:2,17:19:51.82:359,52,0	1/1:0,7:7:19.20:108,19,0	1/1:2,9:11:29.47:225,29,0	1/1:1,9:10:26.86:202,27,0	0/0:20,0:20:60.21:0,60,1410	1/1:2,17:19:52.78:428,53,0	0/0:17,0:17:51.18:0,51,1206
chr10	36545443	.	AC	A	3035.16	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=14.803;DP=617;FS=2.901;HRun=2;HaplotypeScore=78.7930;InbreedingCoeff=0.9989;MQ=82.84;MQ0=0;MQRankSum=-0.326;QD=26.86;ReadPosRankSum=2.633;VQSLOD=3.4596;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,123,1759	0/0:12,0:12:36.12:0,36,539	0/0:20,0:20:57.14:0,57,769	0/0:19,0:19:38.29:0,38,560	1/1:3,21:24:60.16:649,60,0	0/0:27,0:26:75.24:0,75,1099	0/0:11,0:11:33.10:0,33,474	0/0:25,0:25:75.15:0,75,1039	1/1:0,18:18:51.14:558,51,0	0/0:30,0:30:87.29:0,87,1301	0/0:26,0:26:75.23:0,75,1079	0/0:23,0:23:66.22:0,66,986	0/0:20,0:20:60.20:0,60,895	0/0:22,0:22:63.01:0,63,857	0/0:31,0:31:93.29:0,93,1349	1/1:2,23:25:60.16:657,60,0	1/1:0,10:10:27.07:295,27,0	0/0:20,0:20:60.14:0,60,849	0/0:16,0:16:48.11:0,48,676	0/0:25,0:25:75.24:0,75,1100	0/0:30,0:30:90.30:0,90,1347	0/0:13,0:13:39.13:0,39,584	0/0:22,0:22:66.22:0,66,986	0/0:20,0:20:57.15:0,57,827	0/0:17,0:17:47.75:0,48,683	1/1:3,20:23:21.20:637,21,0	0/0:34,0:34:99:0,102,1523	1/1:0,13:13:39.11:427,39,0
chr10	36546267	.	CAT	C	4972.89	PASS	AB=0.522;AC=37;AF=0.661;AN=56;BaseQRankSum=8.346;DP=328;FS=3.051;HRun=0;HaplotypeScore=56.2210;InbreedingCoeff=0.8140;MQ=72.67;MQ0=2;MQRankSum=-0.308;QD=23.13;ReadPosRankSum=1.095;VQSLOD=4.9966;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:42.14:0,42,696	1/1:1,2:3:6.02:77,6,0	0/0:12,0:10:5.81:0,6,65	0/0:15,0:8:8.62:0,9,71	0/1:1,0:12:13.10:60,0,13	0/0:13,0:13:36.12:0,36,602	0/0:6,0:6:12.04:0,12,202	1/1:5,28:33:84.23:1038,84,0	1/1:1,0:11:22.73:111,23,0	0/0:14,0:16:36.11:0,36,560	0/0:15,0:15:36.09:0,36,552	1/1:0,6:6:18.06:232,18,0	1/1:1,5:6:15.05:193,15,0	1/1:0,7:7:21.07:270,21,0	0/0:9,0:9:21.07:0,21,350	1/1:2,0:6:11.36:56,11,0	1/1:1,0:18:33.13:165,33,0	0/0:11,0:11:33.11:0,33,546	1/1:3,8:11:24.08:309,24,0	1/1:1,11:12:33.11:424,33,0	1/1:1,7:8:12.04:154,12,0	1/1:1,2:3:6.02:77,6,0	1/1:1,6:7:12.04:154,12,0	1/1:1,4:5:6.02:77,6,0	1/1:2,19:21:51.17:656,51,0	1/1:2,0:13:31.25:153,31,0	1/1:4,21:25:57.19:733,57,0	1/1:5,0:8:6.93:31,7,0
chr10	36547984	.	AGAT	A	13246.42	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-0.469;DP=569;FS=25.857;HRun=0;HaplotypeScore=72.4403;InbreedingCoeff=0.9289;MQ=54.22;MQ0=15;MQRankSum=3.257;QD=25.97;ReadPosRankSum=6.287;VQSLOD=2.6925;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,26:26:51.17:831,51,0	1/1:0,10:7:15.05:245,15,0	0/0:30,0:25:21.38:0,21,1262	0/0:29,0:25:60.24:0,60,1446	1/1:2,17:13:30.10:490,30,0	1/1:5,20:15:30.10:454,30,0	1/1:0,18:10:18.06:294,18,0	1/1:2,21:10:21.05:289,21,0	1/1:2,18:10:24.05:353,24,0	1/1:1,21:18:45.15:726,45,0	1/1:0,9:6:15.05:245,15,0	1/1:3,27:17:48.16:784,48,0	1/1:3,19:17:42.14:686,42,0	1/1:3,21:14:33.11:526,33,0	1/1:0,17:14:36.12:588,36,0	1/1:1,21:13:33.11:539,33,0	1/1:0,24:20:42.14:685,42,0	1/1:1,15:12:24.08:392,24,0	1/1:0,8:5:9.03:147,9,0	1/1:2,16:11:30.10:490,30,0	1/1:1,29:27:63.20:1016,63,0	1/1:0,11:7:12.04:196,12,0	1/1:0,15:10:27.09:441,27,0	1/1:1,19:20:33.58:539,34,0	1/1:2,16:12:33.11:526,33,0	1/1:0,29:18:51.17:833,51,0	1/1:1,15:13:33.11:539,33,0	1/1:0,11:10:24.08:392,24,0
chr10	36548178	.	CCCT	C	8606.63	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=15.378;DP=535;FS=7.402;HRun=0;HaplotypeScore=103.3000;InbreedingCoeff=0.9954;MQ=89.06;MQ0=0;MQRankSum=-8.567;QD=40.60;ReadPosRankSum=3.657;VQSLOD=6.3192;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,138,2889	1/1:0,7:7:21.07:348,21,0	0/0:28,0:27:78.22:0,78,1706	0/0:23,0:23:59.94:0,60,1205	0/0:14,0:14:39.12:0,39,822	0/0:23,0:20:60.16:0,60,1269	0/0:28,0:27:81.28:0,81,1830	1/1:5,11:16:33.10:525,33,0	0/0:14,0:14:42.13:0,42,902	0/0:26,0:24:69.24:0,69,1541	0/0:17,0:17:48.16:0,48,1070	1/1:1,14:13:33.11:549,33,0	1/1:1,16:17:45.15:749,45,0	1/1:0,23:21:60.21:998,60,0	0/0:19,0:18:51.18:0,51,1155	0/0:14,0:13:39.13:0,39,868	0/0:23,0:23:66.23:0,66,1495	0/0:18,0:18:54.19:0,54,1212	1/1:1,8:9:21.07:341,21,0	1/1:2,17:19:48.16:799,48,0	1/1:2,32:34:87.30:1449,87,0	1/1:2,13:13:33.11:549,33,0	1/1:2,11:13:30.10:499,30,0	1/1:0,17:17:42.61:700,43,0	1/1:0,5:5:15.05:249,15,0	0/0:21,0:21:60.20:0,60,1292	1/1:0,22:21:51.17:849,51,0	0/0:6,0:6:18.06:0,18,408
chr10	36548264	.	G	GAGAT	910.62	PASS	AB=0.939;AC=14;AF=0.368;AN=38;BaseQRankSum=-3.770;DP=553;FS=3.805;HRun=0;HaplotypeScore=134.4892;InbreedingCoeff=0.4514;MQ=76.96;MQ0=1;MQRankSum=2.158;QD=3.94;ReadPosRankSum=-2.606;VQSLOD=1.9143;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:35:6.02:107,6,0	0/0:8,0:8:3:0,3,28	./.	./.	0/1:19,0:20:0:0,0,0	0/1:23,10:34:23.25:389,0,23	./.	./.	0/0:14,0:15:12.02:0,12,136	1/1:25,0:26:9.03:157,9,0	1/1:19,0:18:3.01:58,3,0	0/0:18,0:18:17.61:0,18,147	0/0:16,0:16:14.99:0,15,132	0/0:28,0:28:18.02:0,18,166	1/1:26,0:26:2.17:50,2,0	0/0:14,0:14:18.06:0,18,266	0/0:16,0:22:8.93:0,9,73	1/1:20,5:25:12.04:254,12,0	0/0:13,0:13:6:0,6,54	./.	./.	./.	0/1:12,0:11:0:0,0,0	./.	./.	0/1:26,0:29:25.22:25,0,195	0/0:26,0:25:8.38:0,8,63	0/0:6,0:6:6.02:0,6,89
chr10	36548314	.	GATAGATAGATAGAT	G	1992.83	PASS	AB=1.000;AC=20;AF=0.357;AN=56;BaseQRankSum=9.087;DP=481;FS=41.965;HRun=0;HaplotypeScore=163.1284;InbreedingCoeff=0.6979;MQ=48.33;MQ0=45;MQRankSum=-5.484;QD=11.72;ReadPosRankSum=-0.257;VQSLOD=1.0974;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:57.19:0,57,1649	1/1:9,0:5:3:29,3,0	0/0:17,0:10:30.10:0,30,424	0/0:10,0:6:17.99:0,18,233	0/0:12,0:11:5.99:0,6,151	0/0:25,0:25:57.14:0,57,2545	0/0:18,0:18:51.14:0,51,1060	1/1:17,0:13:19.94:411,20,0	0/0:16,0:16:48.16:0,48,1917	0/0:18,0:16:48.16:0,48,1460	0/0:20,0:18:30.10:0,30,620	0/1:21,0:20:4.90:5,0,314	0/1:21,0:19:39.75:127,0,40	1/1:22,0:20:18.03:175,18,0	0/0:23,0:23:49.28:0,49,1644	0/0:17,0:17:51.17:0,51,2264	0/0:19,0:17:33.09:0,33,822	0/0:29,0:29:75.20:0,75,2203	1/1:0,14:14:39.08:659,39,0	1/1:10,0:5:5.98:60,6,0	1/1:20,0:11:15.05:234,15,0	0/0:10,0:6:2.80:0,3,13	0/0:11,0:7:0:0,0,0	1/1:6,0:3:5.97:62,6,0	1/1:13,0:6:3.01:42,3,0	0/0:25,0:24:72.24:0,72,2808	1/1:2,15:16:9.03:379,9,0	0/0:8,0:8:21.07:0,21,925
chr10	36548318	.	GATAGATAGAT	G	2738.67	PASS	AB=0.553;AC=21;AF=0.389;AN=54;BaseQRankSum=9.185;DP=486;FS=45.596;HRun=0;HaplotypeScore=135.5923;InbreedingCoeff=0.7896;MQ=51.34;MQ0=46;MQRankSum=-6.308;QD=16.02;ReadPosRankSum=0.169;VQSLOD=1.3341;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:57.65:0,58,1278	1/1:4,5:5:3.01:99,3,0	0/0:20,0:13:37.94:0,38,515	0/0:12,0:8:21.47:0,21,276	0/0:13,0:13:6.02:0,6,122	0/0:26,0:26:57.14:0,57,1882	0/0:16,0:16:45.08:0,45,759	1/1:21,0:12:36.12:512,36,0	0/0:16,0:16:48.16:0,48,1353	0/0:20,0:18:54.18:0,54,1209	0/0:20,0:18:33.10:0,33,554	1/1:21,1:21:5.31:105,5,0	0/1:4,17:19:1.13:474,0,1	1/1:4,17:19:18.06:592,18,0	0/0:23,0:23:46.25:0,46,1129	0/0:18,0:18:54.18:0,54,1757	0/0:18,0:16:30.10:0,30,526	0/0:27,0:27:66.22:0,66,1610	1/1:14,0:14:36.09:545,36,0	1/1:8,0:3:2.96:19,3,0	1/1:20,0:11:15.05:212,15,0	./.	0/0:11,0:7:0:0,0,0	1/1:6,0:3:6.02:85,6,0	1/1:13,0:6:3.01:42,3,0	0/0:24,0:23:69.24:0,69,2040	1/1:16,0:14:9.03:242,9,0	0/0:9,0:9:24.08:0,24,716
chr10	36548322	.	GATAGAT	G	2394.86	PASS	AB=1.000;AC=21;AF=0.389;AN=54;BaseQRankSum=9.459;DP=484;FS=45.283;HRun=0;HaplotypeScore=112.5511;InbreedingCoeff=0.8483;MQ=55.06;MQ0=46;MQRankSum=-6.143;QD=14.17;ReadPosRankSum=0.599;VQSLOD=0.5488;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:60.18:0,60,1072	1/1:9,0:5:3.01:53,3,0	0/0:22,0:15:43.96:0,44,596	0/0:12,0:9:24.48:0,24,319	0/0:13,0:13:6.02:0,6,100	0/0:25,0:25:57.14:0,57,1311	0/0:14,0:14:39.12:0,39,589	1/1:23,0:13:39.13:555,39,0	0/0:16,0:16:44.94:0,45,901	0/0:19,0:18:48.13:0,48,872	0/0:20,0:18:30.10:0,30,473	1/1:2,18:19:18.06:406,18,0	1/1:21,0:19:14.88:267,15,0	1/1:21,0:19:18.06:321,18,0	0/0:23,0:23:50.20:0,50,857	0/0:19,0:19:57.19:0,57,1301	0/0:18,0:16:29.46:0,29,338	0/0:27,0:27:66.20:0,66,1224	1/1:14,0:14:36.09:490,36,0	0/1:8,0:3:0:0,0,0	1/1:19,0:10:15.05:212,15,0	./.	0/0:4,8:8:0:0,0,0	1/1:6,0:3:6.02:85,6,0	1/1:12,0:5:3.01:42,3,0	0/0:24,0:23:68.79:0,69,1348	1/1:16,0:14:9.03:158,9,0	0/0:9,0:9:24.08:0,24,516
chr10	36548326	.	GAT	G	1679.37	PASS	AC=20;AF=0.400;AN=50;BaseQRankSum=9.946;DP=484;FS=45.279;HRun=0;HaplotypeScore=89.5418;InbreedingCoeff=0.9023;MQ=60.72;MQ0=46;MQRankSum=-5.812;QD=10.43;ReadPosRankSum=1.257;VQSLOD=1.1316;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:57.18:0,57,845	1/1:7,2:5:3:25,3,0	0/0:24,0:17:49.98:0,50,674	0/0:16,0:12:32.97:0,33,394	0/0:15,0:15:11.87:0,12,150	0/0:27,0:27:63.14:0,63,894	0/0:14,0:14:38.99:0,39,522	1/1:3,20:13:39.13:555,39,0	0/0:13,0:13:32.34:0,32,511	0/0:16,0:15:45.15:0,45,648	0/0:20,0:18:30.10:0,30,431	1/1:20,0:19:17.99:154,18,0	1/1:17,2:17:14.82:128,15,0	1/1:19,1:18:17.99:153,18,0	0/0:22,0:22:44.94:0,45,682	0/0:19,0:19:57.16:0,57,882	0/0:20,0:18:18.82:0,19,275	0/0:25,0:25:57.19:0,57,848	1/1:14,0:14:36.06:435,36,0	./.	1/1:3,17:11:15.05:212,15,0	./.	./.	1/1:1,6:4:6.02:85,6,0	1/1:1,12:6:3.01:42,3,0	0/0:22,0:21:55.66:0,56,893	1/1:16,0:14:9:86,9,0	0/0:11,0:11:27.04:0,27,369
chr10	36548608	.	A	ATGCT	2610.21	PASS	AB=0.917;AC=51;AF=0.944;AN=54;BaseQRankSum=1.546;DP=323;FS=37.385;HRun=0;HaplotypeScore=105.5587;InbreedingCoeff=0.3735;MQ=74.03;MQ0=0;MQRankSum=-6.610;QD=8.67;ReadPosRankSum=2.868;VQSLOD=1.1683;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:19:13.46:100,13,0	1/1:0,0:6:14.72:52,15,0	0/1:9,1:11:93.24:93,0,182	0/0:11,0:12:29.89:0,30,289	1/1:2,0:21:6.47:61,6,0	1/1:2,0:18:33.82:131,34,0	1/1:2,0:10:15.07:55,15,0	1/1:5,0:13:26.53:202,27,0	1/1:2,0:8:16.91:124,17,0	1/1:1,0:15:35.45:312,35,0	./.	1/1:0,0:9:6.27:26,6,0	1/1:3,0:12:5.42:23,5,0	1/1:4,0:14:2.37:8,2,0	1/1:3,0:16:10.49:77,10,0	1/1:1,0:10:14.58:56,15,0	1/1:3,0:10:13.45:93,13,0	1/1:0,0:2:0.47:1,0,0	1/1:2,0:17:47.18:408,47,0	1/1:2,0:9:12.91:84,13,0	1/1:3,0:7:8.68:83,9,0	1/1:0,0:6:2.22:7,2,0	1/1:1,0:8:2.11:9,2,0	1/1:3,0:4:3.48:37,3,0	1/1:1,0:12:15.95:71,16,0	1/1:3,0:13:35.25:347,35,0	1/1:1,0:14:17.06:85,17,0	1/1:0,0:12:28.19:177,28,0
chr10	36548780	.	TCACA	T	495.98	PASS	AB=0.914;AC=18;AF=0.429;AN=42;BaseQRankSum=-2.149;DP=450;FS=1.737;HRun=0;HaplotypeScore=111.5929;InbreedingCoeff=0.3152;MQ=61.01;MQ0=17;MQRankSum=-1.429;QD=2.61;ReadPosRankSum=-2.285;VQSLOD=1.9784;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:19,1:20:2.56:43,3,0	./.	./.	./.	1/1:14,0:15:2.78:30,3,0	1/1:9,3:11:12.03:163,12,0	1/1:23,4:27:9.08:138,9,0	./.	0/1:10,0:12:17.17:17,0,36	1/1:12,1:11:5.89:61,6,0	0/0:9,1:9:2.99:0,3,24	0/0:20,0:18:11.91:0,12,147	0/0:21,0:21:9.03:0,9,116	0/0:17,0:17:5.98:0,6,61	0/0:8,1:9:0:0,0,0	1/1:5,0:7:3.01:39,3,0	0/1:18,0:20:9.88:47,0,10	0/1:7,1:8:32.45:62,0,32	./.	./.	0/1:34,0:30:0:0,0,0	0/0:12,0:11:8.75:0,9,80	0/0:10,0:8:2.99:0,3,24	0/0:32,0:30:22.09:0,22,256	0/0:12,0:12:2.68:0,3,27	1/1:16,0:16:3:28,3,0	./.	0/0:2,0:2:1.82:0,2,5
chr10	36548816	.	A	AG	63.20	PASS	AB=0.869;AC=5;AF=0.089;AN=56;BaseQRankSum=3.122;DP=533;FS=19.311;HRun=0;HaplotypeScore=95.8246;InbreedingCoeff=0.0616;MQ=38.24;MQ0=58;MQRankSum=3.382;QD=0.96;ReadPosRankSum=4.149;VQSLOD=0.4320;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:26:39.07:0,39,500	0/0:6,0:5:6.02:0,6,72	0/0:62,0:7:21.06:0,21,265	0/0:63,0:12:30.57:0,31,415	0/0:20,0:16:20.98:0,21,264	0/0:22,0:18:27.03:0,27,285	0/0:23,0:21:38.92:0,39,456	0/0:20,0:13:38.10:0,38,434	0/0:10,0:9:12.14:0,12,133	0/0:15,0:10:26.95:0,27,326	0/0:6,0:4:3.01:0,3,41	0/1:15,3:16:26.79:86,0,27	0/0:14,0:13:9.19:0,9,199	0/0:12,0:12:11.31:0,11,121	0/0:10,0:10:14.59:0,15,206	0/0:12,0:11:8.97:0,9,86	0/0:22,0:22:54.96:0,55,635	0/0:16,0:15:33:0,33,405	0/0:7,0:5:12.04:0,12,165	0/0:16,0:14:17.97:0,18,224	0/0:42,3:38:57.64:0,58,763	0/1:9,0:10:15.46:25,0,15	1/1:8,1:4:0.47:1,0,0	0/1:25,3:24:50.62:51,0,178	0/0:8,0:8:8.58:0,9,65	0/0:13,0:11:32.93:0,33,410	0/0:8,0:6:12.02:0,12,144	0/0:6,0:6:18.06:0,18,248
chr10	36548818	.	A	AG	410.98	PASS	AB=0.859;AC=10;AF=0.179;AN=56;BaseQRankSum=3.720;DP=530;FS=38.081;HRun=0;HaplotypeScore=93.5832;InbreedingCoeff=0.1323;MQ=37.74;MQ0=56;MQRankSum=3.348;QD=3.74;ReadPosRankSum=1.645;VQSLOD=1.2123;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:26:42.06:0,42,523	0/0:4,0:3:3.01:0,3,41	0/0:67,0:8:21.06:0,21,276	0/0:64,0:12:30.57:0,31,411	0/0:21,0:17:14.74:0,15,263	0/0:22,0:18:27.45:0,27,285	0/0:24,0:22:41.91:0,42,484	0/0:19,0:12:35.68:0,36,432	0/1:10,0:9:10.40:10,0,110	0/0:15,0:10:29.92:0,30,346	0/0:6,0:4:3.01:0,3,41	0/1:11,2:14:26.79:71,0,27	0/1:10,1:12:93.64:94,0,175	0/0:10,0:12:1.91:0,2,41	0/0:11,0:11:14.59:0,15,206	0/0:12,0:11:9.02:0,9,108	0/0:22,0:22:13.96:0,14,579	0/0:15,0:14:32.98:0,33,384	0/0:7,0:5:15.01:0,15,185	0/1:12,0:12:0.51:1,0,187	0/0:44,1:37:45.65:0,46,619	1/1:8,1:9:8.97:97,9,0	1/1:7,1:4:3.01:46,3,0	0/1:16,5:24:99:191,0,167	0/1:9,0:10:32.50:37,0,33	0/0:12,0:10:29.90:0,30,351	0/0:6,0:4:6.02:0,6,83	0/0:6,0:6:18.06:0,18,248
chr10	36548820	.	A	AG	86.37	PASS	AB=0.909;AC=8;AF=0.143;AN=56;BaseQRankSum=2.631;DP=524;FS=36.625;HRun=0;HaplotypeScore=94.6073;InbreedingCoeff=0.0534;MQ=37.54;MQ0=52;MQRankSum=2.471;QD=0.79;ReadPosRankSum=-2.342;VQSLOD=-0.1636;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:26:42.08:0,42,541	0/0:3,0:3:3.01:0,3,41	0/0:68,1:8:21.06:0,21,274	0/0:65,0:13:30.57:0,31,396	0/0:21,0:17:9.78:0,10,275	0/0:22,0:18:27.45:0,27,286	0/0:22,0:20:38.92:0,39,464	0/0:18,0:12:31.47:0,31,415	0/1:9,1:9:33.55:34,0,110	0/0:15,0:10:29.96:0,30,367	0/0:6,0:4:3.01:0,3,41	0/0:15,0:13:10.78:0,11,86	0/1:10,1:10:65.92:66,0,181	0/1:9,2:11:34.49:37,0,34	0/0:11,0:11:14.59:0,15,206	0/0:12,0:11:9.01:0,9,107	0/0:20,1:21:9.34:0,9,557	0/0:15,0:14:30.80:0,31,328	0/0:7,0:5:15.05:0,15,207	0/1:12,0:11:21.39:21,0,150	0/1:41,2:35:4.08:4,0,533	1/1:9,1:9:7.65:39,8,0	0/0:9,0:4:0.47:0,0,1	0/0:29,0:25:2.68:0,3,373	0/1:10,0:11:13.81:14,0,34	0/0:11,0:9:23.84:0,24,273	0/0:6,0:4:6.02:0,6,83	0/0:7,0:7:18.06:0,18,249
chr10	36548827	.	CACACAG	C	1218.26	PASS	AB=0.997;AC=24;AF=0.429;AN=56;BaseQRankSum=-2.095;DP=545;FS=18.951;HRun=0;HaplotypeScore=111.7395;InbreedingCoeff=0.0677;MQ=37.28;MQ0=52;MQRankSum=-0.135;QD=4.19;ReadPosRankSum=1.037;VQSLOD=1.1034;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,1:25:40.51:0,41,269	1/1:4,0:3:2.99:24,3,0	0/0:76,0:9:3.97:0,4,59	0/0:72,0:13:12.19:0,12,127	0/1:21,0:17:36.21:36,0,129	0/1:22,1:19:80.80:104,0,81	0/0:19,1:18:23.52:0,24,252	1/1:20,0:15:18.17:279,18,0	0/1:10,0:9:19.98:20,0,66	0/0:13,0:8:19.63:0,20,132	0/0:7,1:6:8.97:0,9,92	0/1:14,0:13:10.19:10,0,77	0/1:11,0:10:68.52:69,0,87	0/1:12,0:12:14.05:14,0,34	0/0:10,0:10:11.19:0,11,89	0/1:14,0:13:24.08:34,0,24	0/1:21,0:21:18.51:19,0,202	0/1:15,0:14:30.38:30,0,153	1/1:7,0:5:14.89:110,15,0	1/1:14,0:12:14.96:120,15,0	1/1:47,0:38:46.06:354,46,0	0/0:9,0:9:7.99:0,8,50	0/0:10,0:5:3:0,3,26	0/1:30,0:26:85.89:86,0,118	1/1:12,0:12:7.13:52,7,0	0/1:9,0:7:1.27:1,0,111	0/1:7,0:5:3.12:34,0,3	0/0:8,0:8:7.33:0,7,82
chr10	36548881	.	ACACACAGCT	A	785.01	PASS	AB=0.960;AC=7;AF=0.125;AN=56;BaseQRankSum=-0.609;DP=575;FS=8.561;HRun=0;HaplotypeScore=140.7996;InbreedingCoeff=-0.1296;MQ=40.58;MQ0=35;MQRankSum=-2.202;QD=7.93;ReadPosRankSum=-3.411;VQSLOD=0.8929;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:28:44.65:0,45,1164	0/1:3,0:3:9.74:76,0,10	0/0:71,0:4:9.15:0,9,144	0/0:84,0:11:14.45:0,14,171	0/0:19,0:19:13.59:0,14,889	0/0:16,0:16:23.66:0,24,671	0/0:25,0:24:41.47:0,41,997	0/1:16,10:24:99:534,0,596	0/0:11,0:10:27.05:0,27,765	0/0:18,0:17:48.08:0,48,1306	0/0:8,0:7:6.02:0,6,158	0/1:21,0:20:99:154,0,250	0/1:10,0:10:69.57:70,0,171	0/0:15,0:14:8.70:0,9,91	0/0:15,0:15:32.29:0,32,789	0/0:16,0:16:35.69:0,36,909	0/0:29,0:29:59.32:0,59,1778	0/0:19,0:19:31.88:0,32,1129	0/1:14,0:7:19.41:19,0,187	0/1:8,0:8:26.86:27,0,122	0/0:34,1:31:20.01:0,20,396	0/0:6,0:5:2.69:0,3,18	0/0:5,0:4:2.22:0,2,7	0/1:17,0:15:33.50:34,0,245	0/0:12,0:11:1.46:0,1,14	0/0:20,0:19:54.06:0,54,1464	0/0:9,0:8:8.35:0,8,93	0/0:12,0:11:27.09:0,27,909
chr10	36548890	.	T	TCA	7311.56	PASS	AB=0.725;AC=48;AF=0.857;AN=56;BaseQRankSum=-2.840;DP=634;FS=0.000;HRun=0;HaplotypeScore=91.8536;InbreedingCoeff=0.3695;MQ=43.05;MQ0=37;MQRankSum=0.795;QD=14.92;ReadPosRankSum=1.728;VQSLOD=4.7839;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,21:30:36.12:584,36,0	1/1:4,0:5:3:26,3,0	0/0:67,0:7:8.99:0,9,87	0/0:74,0:13:8.58:0,9,95	0/1:11,12:23:2.21:307,0,2	1/1:7,11:17:27.09:438,27,0	1/1:7,20:27:38.99:631,39,0	0/1:23,0:21:45.98:94,0,46	1/1:5,8:12:21.07:331,21,0	1/1:3,14:17:42.11:647,42,0	1/1:3,11:13:9.03:146,9,0	1/1:4,0:26:29.59:204,30,0	1/1:4,0:17:5.04:32,5,0	1/1:6,1:18:6.97:38,7,0	1/1:3,14:17:26.90:437,27,0	0/1:3,16:19:0.52:498,0,1	1/1:11,15:26:50.41:801,50,0	1/1:5,15:20:39.13:661,39,0	1/1:9,0:11:20.33:180,20,0	1/1:2,2:12:1.82:6,2,0	0/1:24,0:39:0.14:0,0,0	1/1:3,0:8:2.04:6,2,0	1/1:2,0:7:1.82:5,2,0	1/1:6,1:18:3:27,3,0	1/1:3,0:16:2.04:6,2,0	1/1:6,18:23:48.14:745,48,0	1/1:2,0:10:4.82:32,5,0	1/1:2,11:13:27.09:429,27,0
chr10	36550179	.	T	TA	9069.37	PASS	AB=0.571;AC=25;AF=0.446;AN=56;BaseQRankSum=-17.604;DP=714;FS=4.607;HRun=10;HaplotypeScore=109.4159;InbreedingCoeff=0.9220;MQ=58.64;MQ0=3;MQRankSum=2.279;QD=23.74;ReadPosRankSum=0.231;VQSLOD=4.1362;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:13,47:61:99:1518,104,0	0/0:3,0:14:18.20:0,18,53	0/0:5,0:5:10.54:0,11,78	0/0:10,0:9:18.44:0,18,167	1/1:1,36:37:90.19:946,90,0	1/1:2,21:23:57.14:608,57,0	1/1:5,24:28:63.16:672,63,0	0/0:9,0:18:32.59:0,33,94	1/1:4,21:25:54.14:576,54,0	1/1:5,29:32:79.06:823,79,0	1/1:1,16:17:45.11:480,45,0	0/0:4,0:16:26.22:0,26,74	0/0:1,0:20:34.63:0,35,100	0/0:6,0:23:30.55:0,31,88	1/1:5,23:28:54.14:576,54,0	1/1:3,22:27:65.83:668,66,0	1/1:2,29:31:47.54:711,48,0	1/1:2,30:32:72.18:768,72,0	0/0:4,0:25:44.81:0,45,129	0/0:4,0:29:46.84:0,47,135	0/0:2,0:36:55:0,55,159	0/0:4,0:25:40.74:0,41,118	0/0:2,0:19:26.10:0,26,76	0/0:1,0:35:63.14:0,63,182	0/0:2,0:24:42.78:0,43,124	0/1:7,21:27:13.81:467,0,14	0/0:2,0:23:38.70:0,39,111	1/1:2,8:10:24.06:256,24,0
chr10	36551288	.	GA	G	8400.94	PASS	AC=52;AF=0.963;AN=54;BaseQRankSum=-1.569;DP=464;FS=0.000;HRun=8;HaplotypeScore=85.2574;InbreedingCoeff=0.5230;MQ=38.10;MQ0=10;MQRankSum=-0.472;QD=18.34;ReadPosRankSum=-1.370;VQSLOD=4.2611;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:12,15:25:51.04:477,51,0	1/1:2,7:9:21:194,21,0	./.	0/0:2,0:1:0:0,0,0	1/1:4,11:15:27.04:261,27,0	1/1:5,16:20:48.05:461,48,0	1/1:5,13:17:33.04:318,33,0	1/1:9,17:25:54.07:519,54,0	1/1:10,10:20:38.99:368,39,0	1/1:7,10:15:29.94:276,30,0	1/1:9,8:16:27.03:257,27,0	1/1:6,12:18:32.96:317,33,0	1/1:14,8:21:9.84:315,10,0	1/1:6,12:18:44.98:421,45,0	1/1:6,12:18:42.06:402,42,0	1/1:2,8:10:24.03:230,24,0	1/1:3,16:19:27.03:258,27,0	1/1:7,4:11:18.01:170,18,0	1/1:9,11:17:36.02:339,36,0	1/1:5,14:17:30.04:289,30,0	1/1:2,5:7:9.01:87,9,0	1/1:6,17:21:42.04:395,42,0	1/1:4,18:22:54.07:518,54,0	1/1:2,15:16:32.66:317,33,0	1/1:9,8:16:32.96:299,33,0	1/1:8,7:14:30.04:285,30,0	1/1:7,14:20:45.03:426,45,0	1/1:3,7:8:21.03:202,21,0
chr10	36551301	.	CAAAA	C	4495.94	PASS	AB=0.660;AC=31;AF=0.554;AN=56;BaseQRankSum=1.412;DP=500;FS=5.931;HRun=17;HaplotypeScore=131.8356;InbreedingCoeff=0.4253;MQ=38.78;MQ0=12;MQRankSum=-2.356;QD=12.85;ReadPosRankSum=3.485;VQSLOD=1.3123;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:23:28.45:0,28,215	1/1:4,5:11:19.15:198,19,0	0/0:16,0:5:12.73:0,13,120	0/0:6,0:3:5.99:0,6,60	0/1:5,3:23:31.56:112,0,32	0/0:9,0:24:49.55:0,50,314	0/0:11,0:17:19.31:0,19,124	1/1:15,12:26:46.33:515,46,0	0/1:10,0:18:12.61:13,0,69	0/0:9,0:20:44.31:0,44,322	0/1:5,1:15:8.44:8,0,158	1/1:10,9:22:15.26:311,15,0	0/1:7,8:17:39.28:331,0,39	1/1:6,10:17:33.69:401,34,0	0/0:10,0:18:21.43:0,21,138	0/1:6,1:15:19.25:73,0,19	0/1:10,1:14:29.70:33,0,30	0/0:5,0:9:14.82:0,15,114	1/1:8,9:15:21.99:291,22,0	1/1:6,12:17:22.60:316,23,0	0/0:8,3:10:1.36:0,1,4	1/1:6,12:18:30.88:349,31,0	1/1:11,12:25:25.10:371,25,0	1/1:7,7:16:29.44:328,29,0	1/1:2,10:13:35.80:393,36,0	1/1:10,1:17:3.26:46,3,0	1/1:8,14:24:2.14:403,2,0	0/1:8,0:10:4.83:5,0,24
chr10	36551315	.	AAAAG	A	1785.34	PASS	AB=0.980;AC=17;AF=0.304;AN=56;BaseQRankSum=7.796;DP=509;FS=34.702;HRun=0;HaplotypeScore=132.3121;InbreedingCoeff=-0.1342;MQ=52.34;MQ0=8;MQRankSum=-8.824;QD=6.20;ReadPosRankSum=8.604;VQSLOD=0.6785;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:24:40.22:0,40,263	0/1:11,0:11:54.28:59,0,54	0/0:26,0:12:33.06:0,33,359	0/0:12,0:5:11.68:0,12,96	0/1:26,0:26:10.67:11,0,232	0/0:19,0:19:35.71:0,36,271	0/0:14,0:14:19.60:0,20,142	0/1:31,0:31:99:115,0,258	0/0:17,0:17:13.37:0,13,113	0/0:24,0:23:53.74:0,54,486	0/0:17,0:17:5.05:0,5,249	0/1:17,2:19:23.98:150,0,24	0/1:20,0:20:79.19:213,0,79	1/1:14,0:14:22.64:241,23,0	0/0:16,0:16:28.45:0,28,209	0/1:15,1:16:50.16:50,0,63	0/1:13,0:12:13.99:14,0,62	0/0:12,0:12:23.93:0,24,203	0/1:14,1:15:79.53:115,0,80	0/1:25,1:23:99:115,0,168	0/0:10,2:11:3.72:0,4,89	0/1:20,0:19:99:121,0,103	0/1:23,0:23:99:167,0,106	1/1:13,2:14:24.79:225,25,0	0/1:17,0:17:75.76:155,0,76	0/0:19,0:18:9.86:0,10,140	0/1:22,0:22:57.70:202,0,58	0/0:8,0:6:9.41:0,9,35
chr10	36551316	.	AAAG	A	667.38	PASS	AB=0.970;AC=20;AF=0.357;AN=56;BaseQRankSum=11.324;DP=500;FS=35.469;HRun=0;HaplotypeScore=126.0314;InbreedingCoeff=-0.0986;MQ=52.94;MQ0=8;MQRankSum=-11.031;QD=2.35;ReadPosRankSum=11.370;VQSLOD=-0.1736;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:22:11.66:0,12,132	0/1:11,0:11:6.98:7,0,62	0/0:26,0:12:33.04:0,33,335	0/0:12,0:5:11.58:0,12,73	0/1:26,0:26:69.92:70,0,142	0/0:19,0:19:31.95:0,32,165	0/1:13,0:13:0.20:0,0,55	0/0:31,0:31:39.46:0,39,350	0/1:14,1:15:65.01:84,0,65	0/0:24,0:23:52.85:0,53,368	0/0:17,0:17:28.70:0,29,195	0/1:19,0:19:27.58:42,0,28	0/1:20,0:20:57.27:91,0,57	1/1:13,1:14:11.47:94,11,0	0/0:16,0:16:2.17:0,2,137	0/1:14,2:16:18.42:128,0,18	0/1:9,2:10:33.20:33,0,42	0/0:11,0:11:25.68:0,26,173	0/1:15,0:15:11.72:12,0,105	0/0:26,0:23:7.63:0,8,191	0/0:11,0:10:15.49:0,15,104	0/1:19,1:19:18.86:19,0,116	0/1:23,0:23:23.41:23,0,107	1/1:15,0:14:20.78:97,21,0	0/1:17,0:17:19.79:20,0,89	0/1:18,1:18:16.78:17,0,86	0/1:22,0:22:51.78:52,0,54	1/1:8,0:6:10.73:47,11,0
chr10	36551317	.	AAG	A	99.54	PASS	AB=0.969;AC=12;AF=0.214;AN=56;BaseQRankSum=4.534;DP=494;FS=60.254;HRun=0;HaplotypeScore=120.1259;InbreedingCoeff=-0.0331;MQ=54.57;MQ0=7;MQRankSum=-7.582;QD=0.60;ReadPosRankSum=4.847;VQSLOD=-0.7319;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:21,1:21:38.98:39,0,47	0/0:11,0:11:18.36:0,18,110	0/0:26,0:12:32.65:0,33,298	0/0:13,0:6:10.87:0,11,55	0/0:25,1:26:34.53:0,35,225	0/1:19,0:19:22.57:23,0,43	0/1:13,0:13:16.11:16,0,22	0/0:30,0:30:68.24:0,68,449	0/1:15,0:15:4.29:4,0,77	0/0:22,1:22:9.79:0,10,223	0/0:17,0:17:8.31:0,8,125	0/0:17,0:17:2.51:0,3,51	0/1:19,0:19:14.64:15,0,79	0/1:14,0:14:9.49:24,0,9	0/1:13,3:16:38.33:38,0,93	0/1:16,0:16:27.38:27,0,36	0/1:11,0:10:3.75:4,0,49	0/0:12,0:12:22.14:0,22,158	0/0:16,0:16:13.67:0,14,159	0/0:26,0:23:34.58:0,35,241	0/0:12,0:11:16.13:0,16,108	0/0:21,0:20:25.38:0,25,185	0/0:21,0:21:13.38:0,13,140	1/1:13,0:13:11.09:46,11,0	0/0:17,0:17:19.69:0,20,142	0/0:18,0:17:24.62:0,25,151	0/0:22,0:22:4.66:0,5,85	0/1:7,1:6:5:9,0,5
chr10	36551562	.	ATG	A	10534.87	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=14.565;DP=653;FS=2.138;HRun=0;HaplotypeScore=85.6835;InbreedingCoeff=0.9986;MQ=74.11;MQ0=4;MQRankSum=-5.128;QD=33.87;ReadPosRankSum=2.281;VQSLOD=7.2257;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:66.23:0,66,1179	1/1:1,10:10:18.06:251,18,0	0/0:23,0:22:48.12:0,48,879	0/0:17,0:17:35.90:0,36,690	0/0:31,0:31:84.27:0,84,1461	0/0:18,0:18:51.17:0,51,898	0/0:23,0:23:66.23:0,66,1176	1/1:3,24:27:72.21:970,72,0	0/0:27,0:27:72.22:0,72,1222	0/0:31,0:31:90.31:0,90,1606	0/0:18,0:18:45.14:0,45,769	1/1:0,34:34:84.28:1174,84,0	1/1:1,19:20:47.72:671,48,0	1/1:2,19:21:45.15:630,45,0	0/0:29,0:29:84.29:0,84,1513	0/0:27,0:27:72.25:0,72,1283	0/0:20,0:20:60.21:0,60,1063	0/0:14,0:14:39.13:0,39,691	1/1:3,23:26:69.21:946,69,0	1/1:1,28:29:66.22:924,66,0	1/1:2,21:23:57.19:798,57,0	1/1:1,30:30:72.22:988,72,0	1/1:3,24:26:60.20:839,60,0	1/1:0,14:14:39.13:546,39,0	1/1:0,17:17:51.17:714,51,0	0/0:31,0:31:84.29:0,84,1495	1/1:1,30:30:78.26:1082,78,0	0/0:8,0:8:24.08:0,24,432
chr10	36552851	.	ACT	A	4380.83	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=16.005;DP=679;FS=2.225;HRun=0;HaplotypeScore=121.8740;InbreedingCoeff=0.9998;MQ=93.72;MQ0=0;MQRankSum=-15.716;QD=29.01;ReadPosRankSum=1.355;VQSLOD=6.6199;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,25:34:64.12:829,64,0	0/0:11,0:11:33.11:0,33,595	0/0:32,0:32:93.29:0,93,1642	0/0:36,0:36:96.33:0,96,1747	0/0:26,0:26:72.23:0,72,1309	1/1:6,16:22:48.16:641,48,0	1/1:4,15:19:39.13:529,39,0	0/0:26,0:26:75.26:0,75,1395	0/0:31,0:31:87.30:0,87,1616	1/1:5,19:24:57.19:800,57,0	1/1:4,23:27:61.91:722,62,0	0/0:24,0:24:72.23:0,72,1300	0/0:24,0:24:69.24:0,69,1284	0/0:23,0:23:69.22:0,69,1261	1/1:2,10:12:33.11:439,33,0	0/0:20,0:20:57.20:0,57,1059	0/0:30,0:30:90.29:0,90,1652	1/1:2,11:13:30.10:420,30,0	0/0:20,0:20:57.18:0,57,1038	0/0:23,0:23:66.21:0,66,1204	0/0:41,0:41:99:0,114,2127	0/0:18,0:18:54.17:0,54,980	0/0:27,0:27:81.25:0,81,1433	0/0:16,0:16:45.15:0,45,843	0/0:35,0:35:99:0,105,1924	0/0:20,0:20:60.21:0,60,1117	0/0:32,0:31:96.33:0,96,1797	0/0:13,0:13:39.13:0,39,723
chr10	36552857	.	A	AAGAGT	11997.85	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=15.165;DP=682;FS=2.539;HRun=0;HaplotypeScore=145.4004;InbreedingCoeff=0.9997;MQ=93.08;MQ0=0;MQRankSum=-16.704;QD=79.99;ReadPosRankSum=-0.725;VQSLOD=6.2588;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,25:30:75.25:2314,75,0	0/0:10,0:10:27.07:0,27,558	0/0:30,0:30:84.23:0,84,1761	0/0:36,0:36:96.29:0,96,2006	0/0:26,0:26:75.26:0,75,1665	1/1:6,15:21:51.16:1513,51,0	1/1:5,13:18:51.17:1478,51,0	0/0:27,0:27:78.25:0,78,1654	0/0:29,0:29:81.28:0,81,1768	1/1:8,19:27:78.27:2456,78,0	1/1:7,22:30:78.23:2248,78,0	0/0:22,0:22:60.21:0,60,1313	0/0:24,0:24:69.24:0,69,1539	0/0:25,0:25:72.23:0,72,1563	1/1:2,10:12:36.12:1112,36,0	0/0:20,0:20:60.20:0,60,1290	0/0:31,0:31:93.28:0,93,1963	1/1:1,11:12:30.07:878,30,0	0/0:22,0:22:63.17:0,63,1262	0/0:23,0:23:69.22:0,69,1474	0/0:41,0:41:99:0,120,2674	0/0:17,0:17:51.18:0,51,1137	0/0:28,0:28:81.28:0,81,1784	0/0:18,0:18:54.19:0,54,1147	0/0:35,0:35:99:0,102,2107	0/0:22,0:22:66.22:0,66,1375	0/0:33,0:32:96.33:0,96,2133	0/0:13,0:13:39.13:0,39,870
chr10	36552996	.	TTTTG	T	9470.72	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=2.632;DP=653;FS=3.438;HRun=0;HaplotypeScore=138.3104;InbreedingCoeff=0.7655;MQ=69.25;MQ0=2;MQRankSum=2.764;QD=16.05;ReadPosRankSum=3.968;VQSLOD=4.5358;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:32:30.66:244,31,0	1/1:4,6:10:12.04:189,12,0	0/0:32,0:26:8.95:0,9,155	0/0:30,0:24:12.04:0,12,175	1/1:7,0:24:26.35:216,26,0	1/1:10,0:18:15:135,15,0	1/1:13,0:22:9.01:84,9,0	1/1:34,8:42:17.29:246,17,0	1/1:10,0:25:33.04:306,33,0	1/1:9,0:19:24:216,24,0	1/1:3,0:20:32.21:274,32,0	1/1:6,16:22:33.11:519,33,0	1/1:8,15:23:42.14:660,42,0	1/1:8,13:21:33.11:519,33,0	1/1:9,0:15:15.02:140,15,0	1/1:5,0:26:51.06:475,51,0	1/1:16,0:30:17.30:166,17,0	1/1:7,0:11:5.87:56,6,0	1/1:19,12:31:36.04:533,36,0	1/1:10,13:23:36.12:566,36,0	1/1:15,10:25:24.08:376,24,0	1/1:4,17:20:39.12:572,39,0	1/1:6,15:21:36.12:566,36,0	1/1:6,22:28:64.16:1033,64,0	1/1:8,9:18:20.56:292,21,0	1/1:2,0:24:45.89:402,46,0	1/1:8,19:27:42.14:660,42,0	1/1:10,0:12:3:28,3,0
chr10	36553150	.	G	GCC	18234.62	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-7.757;DP=619;FS=0.702;HRun=8;HaplotypeScore=76.2051;InbreedingCoeff=0.9946;MQ=77.99;MQ0=2;MQRankSum=-8.730;QD=32.10;ReadPosRankSum=5.153;VQSLOD=4.9503;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,18:29:51.17:789,51,0	1/1:1,10:12:23.76:380,24,0	0/0:20,0:20:44.45:0,44,466	0/0:30,0:30:23.97:0,24,473	1/1:8,18:28:51.17:791,51,0	1/1:5,19:27:56.67:847,57,0	1/1:0,24:25:62.70:961,63,0	1/1:10,14:25:42.10:610,42,0	1/1:1,18:20:51.17:803,51,0	1/1:1,16:18:42.14:649,42,0	1/1:0,20:22:41.63:626,42,0	1/1:3,12:16:33.48:486,33,0	1/1:2,17:19:36.12:572,36,0	1/1:1,10:11:33.07:488,33,0	1/1:0,14:14:36.12:571,36,0	1/1:1,23:27:62.36:960,62,0	1/1:2,33:38:92.28:1379,92,0	1/1:5,13:18:36.12:571,36,0	1/1:9,9:19:36.82:487,37,0	1/1:1,19:22:53.58:745,54,0	1/1:5,38:45:95.30:1446,95,0	1/1:3,11:17:31.96:445,32,0	1/1:2,19:22:47.65:723,48,0	1/1:3,17:20:48.16:762,48,0	1/1:2,12:16:29.59:437,30,0	1/1:4,13:18:36.08:522,36,0	1/1:4,19:25:56.50:852,57,0	1/1:4,10:13:21.07:333,21,0
chr10	36553813	.	A	ATT	8298.11	PASS	AB=0.709;AC=51;AF=0.911;AN=56;BaseQRankSum=-1.190;DP=676;FS=0.838;HRun=11;HaplotypeScore=122.6975;InbreedingCoeff=0.3197;MQ=76.07;MQ0=1;MQRankSum=-2.605;QD=12.57;ReadPosRankSum=-0.074;VQSLOD=3.1345;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:8,0:39:85.53:94,0,86	1/1:4,7:12:17.55:226,18,0	0/0:16,0:16:6.67:0,7,99	0/1:12,0:12:7.92:8,0,38	1/1:7,1:32:56.99:285,57,0	1/1:4,0:28:43.28:164,43,0	1/1:3,0:22:39.93:137,40,0	1/1:8,14:23:48.06:561,48,0	1/1:5,3:29:16.33:235,16,0	1/1:11,0:34:51.97:230,52,0	1/1:3,1:20:41.19:212,41,0	1/1:2,19:22:30.10:420,30,0	1/1:1,10:11:14.83:217,15,0	1/1:2,18:21:29.33:370,29,0	1/1:8,0:36:31.69:179,32,0	1/1:7,0:31:49.91:171,50,0	0/1:9,0:37:15.90:143,0,16	1/1:5,0:27:26.31:151,26,0	1/1:6,10:18:42.06:492,42,0	1/1:6,21:29:67.20:746,67,0	1/1:4,17:21:33.11:478,33,0	1/1:10,18:27:24.90:615,25,0	1/1:0,12:13:21.02:265,21,0	1/1:2,19:22:44.64:617,45,0	1/1:1,15:16:27.09:391,27,0	1/1:6,0:40:23.05:288,23,0	1/1:4,17:22:38.92:541,39,0	1/1:1,0:14:17.94:61,18,0
chr10	36553982	.	TTTTTGTTTTG	T	4458.87	PASS	AB=0.908;AC=24;AF=0.429;AN=56;BaseQRankSum=6.055;DP=689;FS=5.025;HRun=0;HaplotypeScore=226.9172;InbreedingCoeff=0.8114;MQ=57.73;MQ0=5;MQRankSum=-7.514;QD=16.39;ReadPosRankSum=3.045;VQSLOD=3.4031;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:38:39.61:0,40,1441	1/1:4,3:7:5.84:178,6,0	0/0:22,0:16:6.02:0,6,193	0/0:20,0:15:3.01:0,3,107	0/0:27,0:27:57.20:0,57,2705	0/0:22,0:29:51.18:0,51,1744	0/0:29,0:28:46.04:0,46,1966	1/1:25,0:25:6.02:130,6,0	0/0:22,0:22:48.16:0,48,2273	0/0:25,0:37:84.29:0,84,3680	0/0:20,0:25:45.14:0,45,1611	1/1:6,8:14:12.04:343,12,0	1/1:6,11:17:27.06:734,27,0	1/1:5,11:16:21.03:555,21,0	0/0:17,0:29:60.21:0,60,2027	0/0:32,0:32:57.20:0,57,2726	0/0:28,0:27:66.23:0,66,3140	0/0:22,0:22:40.95:0,41,1698	1/1:18,5:22:15.05:446,15,0	1/1:17,10:26:17.89:346,18,0	0/1:21,0:21:1.38:19,0,1	1/1:8,8:16:11.95:218,12,0	1/1:14,10:23:10.96:282,11,0	0/1:24,7:31:6.46:80,0,6	1/1:9,12:21:17.98:396,18,0	0/0:33,0:34:63.22:0,63,2883	1/1:16,14:30:27.05:733,27,0	0/0:23,0:23:27.02:0,27,943
chr10	36554437	.	G	GAA	2867.69	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-11.206;DP=502;FS=2.134;HRun=7;HaplotypeScore=114.9557;InbreedingCoeff=0.8827;MQ=62.60;MQ0=19;MQRankSum=0.674;QD=31.51;ReadPosRankSum=-1.906;VQSLOD=2.9062;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:60.26:0,60,181	0/0:11,0:10:16.30:0,16,48	0/0:10,0:4:5.11:0,5,62	0/0:12,0:5:11.85:0,12,94	1/1:4,18:22:51:739,51,0	0/0:25,0:25:23.43:0,23,85	0/0:12,0:11:8.64:0,9,34	0/0:28,0:28:5.16:0,5,53	1/1:2,6:8:12.04:197,12,0	0/0:18,0:18:34.57:0,35,103	0/0:15,0:15:20.51:0,21,61	0/0:14,0:14:20.36:0,20,59	0/0:15,0:15:30.34:0,30,88	0/0:9,0:9:8.68:0,9,34	0/0:7,0:7:12.22:0,12,36	1/1:2,11:11:24.08:394,24,0	1/1:2,23:25:54.18:886,54,0	0/0:27,0:26:30:0,30,106	0/0:17,0:17:30.83:0,31,93	0/0:25,0:25:36.48:0,36,125	0/0:15,0:15:22.41:0,22,66	0/0:26,0:26:34.46:0,34,101	0/0:22,0:21:33.04:0,33,98	0/0:24,0:23:37.38:0,37,119	0/0:20,0:19:32.58:0,33,95	1/1:5,14:19:41.26:732,41,0	0/0:20,0:20:26.47:0,26,77	1/1:2,2:4:6.02:98,6,0
chr10	36554444	.	AT	A	13062.77	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-8.466;DP=489;FS=4.042;HRun=1;HaplotypeScore=66.6167;InbreedingCoeff=0.9810;MQ=67.84;MQ0=6;MQRankSum=-0.047;QD=33.67;ReadPosRankSum=2.925;VQSLOD=4.8270;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,36:36:87.29:1199,87,0	1/1:0,9:9:24.08:335,24,0	0/0:7,0:6:18.01:0,18,189	0/0:10,0:7:21.02:0,21,236	0/0:21,0:21:54.26:0,54,353	1/1:1,22:22:57.19:782,57,0	1/1:0,13:13:24.08:328,24,0	1/1:0,29:29:78.19:969,78,0	0/0:5,0:5:11.75:0,12,70	1/1:0,20:20:60.16:781,60,0	1/1:0,14:14:38.98:474,39,0	1/1:0,14:14:30.10:419,30,0	1/1:0,16:16:45.15:628,45,0	1/1:0,10:10:24.08:328,24,0	1/1:0,6:6:18.06:251,18,0	0/0:10,0:9:23.54:0,24,140	0/0:25,0:25:58.87:0,59,380	1/1:1,26:25:66.22:903,66,0	1/1:0,20:20:57.10:707,57,0	1/1:3,24:25:68.65:876,69,0	1/1:0,13:13:33.11:460,33,0	1/1:0,26:26:68.96:830,69,0	1/1:0,19:19:48.16:665,48,0	1/1:0,23:23:66.22:912,66,0	1/1:1,24:23:48.16:670,48,0	0/0:18,1:19:14.30:0,14,352	1/1:0,18:18:39.13:544,39,0	0/0:4,0:4:11.87:0,12,83
chr10	36557242	.	TAAGG	T	24994.52	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=8.413;DP=703;FS=0.320;HRun=0;HaplotypeScore=134.9077;InbreedingCoeff=0.9998;MQ=83.00;MQ0=1;MQRankSum=-8.393;QD=48.35;ReadPosRankSum=3.837;VQSLOD=5.6068;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,40:41:99:1939,105,0	1/1:0,14:14:42.14:776,42,0	0/0:28,0:28:69.24:0,69,1815	0/0:25,0:25:72.22:0,72,1650	0/0:36,0:36:99:0,102,2681	1/1:1,23:24:66.23:1253,66,0	1/1:4,14:18:33.11:626,33,0	1/1:2,28:30:84.29:1588,84,0	0/0:31,0:31:90.30:0,90,2364	1/1:4,26:30:75.24:1376,75,0	1/1:1,16:17:39.13:723,39,0	1/1:1,31:32:78.27:1481,78,0	1/1:1,24:25:66.20:1253,66,0	1/1:2,24:26:63.22:1180,63,0	1/1:1,37:38:99:2050,108,0	0/0:19,0:19:57.20:0,57,1536	0/0:15,0:15:42.14:0,42,1118	1/1:1,22:23:60.21:1122,60,0	1/1:3,14:17:45.02:770,45,0	1/1:0,31:31:87.26:1596,87,0	1/1:1,23:24:57.20:1065,57,0	1/1:1,24:25:69.24:1293,69,0	1/1:2,22:24:60.20:1104,60,0	1/1:1,21:21:48.13:911,48,0	1/1:1,20:21:51.17:951,51,0	0/0:22,0:22:66.21:0,66,1681	1/1:0,35:35:99:1937,102,0	0/0:10,0:10:30.10:0,30,810
chr10	36558559	.	A	ATCTCTC	1177.46	PASS	AB=1.000;AC=11;AF=0.204;AN=54;BaseQRankSum=-3.318;DP=563;FS=8.740;HRun=0;HaplotypeScore=181.8090;InbreedingCoeff=0.6239;MQ=60.89;MQ0=11;MQRankSum=-3.181;QD=8.99;ReadPosRankSum=-2.623;VQSLOD=1.7157;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:20:18.06:0,18,342	0/0:4,0:4:6.02:0,6,120	0/0:23,0:13:5.91:0,6,38	./.	1/1:30,2:32:15.02:202,15,0	0/1:23,0:23:8.52:9,0,270	0/0:6,0:6:6.02:0,6,104	0/0:35,0:36:12.04:0,12,180	1/1:17,0:26:12.04:289,12,0	0/0:19,0:18:8.54:0,9,478	0/0:31,0:31:30.09:0,30,450	0/0:16,0:17:11.36:0,11,236	0/0:17,0:17:3.80:0,4,51	0/0:24,0:24:1.21:0,1,98	0/0:16,0:16:9.02:0,9,132	0/0:11,7:18:3.48:0,3,21	1/1:11,0:10:6.01:73,6,0	0/0:10,0:10:9.87:0,10,115	0/0:19,0:18:21.87:0,22,332	0/0:20,0:23:23.75:0,24,432	0/0:13,0:13:8.76:0,9,114	0/0:26,0:27:23.80:0,24,376	0/0:12,0:13:8.68:0,9,99	0/0:21,0:22:27.07:0,27,461	0/0:23,0:23:20.99:0,21,379	1/1:25,3:26:12.99:625,13,0	0/0:21,0:23:19.85:0,20,306	1/1:9,1:8:10.17:136,10,0
chr10	36558589	.	C	CTGTG	2169.64	PASS	AB=0.901;AC=25;AF=0.446;AN=56;BaseQRankSum=4.461;DP=520;FS=4.849;HRun=0;HaplotypeScore=147.0206;InbreedingCoeff=-0.2982;MQ=44.06;MQ0=15;MQRankSum=1.472;QD=5.27;ReadPosRankSum=0.761;VQSLOD=2.5875;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:20,0:19:11.55:12,0,12	0/1:6,0:6:7.83:52,0,8	0/0:14,0:8:18:0,18,265	0/0:16,0:1:3.01:0,3,44	0/0:33,0:32:2.99:0,3,23	0/1:20,0:19:99:134,0,143	0/0:5,0:5:6.02:0,6,91	0/1:32,0:30:99:201,0,470	0/1:20,0:20:52.76:53,0,104	0/1:17,0:16:7.37:7,0,487	0/1:25,0:25:16.74:17,0,273	0/1:13,1:15:8.19:176,0,8	0/1:4,2:21:21.78:92,0,22	0/1:4,8:15:11.87:65,0,12	0/0:11,0:11:11.29:0,11,136	0/0:17,0:16:6.91:0,7,93	0/1:9,0:8:46.74:47,0,57	0/0:12,0:12:16.33:0,16,148	0/1:13,8:21:99:260,0,256	0/1:21,0:21:0.47:0,0,25	1/1:12,0:12:3.88:150,4,0	1/1:33,0:31:14.96:365,15,0	1/1:15,0:16:3.93:62,4,0	0/1:24,0:24:32:61,0,32	1/1:22,1:23:0.01:159,0,0	0/1:23,0:21:99:198,0,228	0/1:12,12:26:6.28:135,0,6	0/1:10,0:7:55.34:77,0,55
chr10	36558593	.	C	CTGTGTGTGTG	3933.15	PASS	AB=0.985;AC=34;AF=0.607;AN=56;BaseQRankSum=2.880;DP=502;FS=7.895;HRun=0;HaplotypeScore=171.2152;InbreedingCoeff=0.0390;MQ=44.67;MQ0=15;MQRankSum=2.648;QD=9.43;ReadPosRankSum=0.042;VQSLOD=2.1131;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:21:7.48:63,7,0	1/1:6,0:6:2.30:135,2,0	0/0:15,0:8:17.06:0,17,306	0/0:17,0:4:8.97:0,9,138	0/0:23,8:31:14.97:0,15,163	1/1:20,0:19:25.19:494,25,0	0/0:6,0:6:2.80:0,3,7	0/1:29,0:27:99:286,0,163	0/1:18,0:18:11.58:154,0,12	0/1:17,0:16:86.58:155,0,87	1/1:23,0:23:15.56:190,16,0	1/1:16,0:16:17.60:250,18,0	1/1:20,0:20:8.91:108,9,0	0/1:12,0:12:0.45:52,0,0	0/1:10,0:10:0.39:16,0,0	0/0:15,0:14:3:0,3,25	0/1:8,0:8:62:81,0,62	0/1:9,0:9:6.49:47,0,6	0/1:21,0:19:75.71:250,0,76	0/1:24,0:22:4.34:48,0,4	1/1:14,0:14:6.46:195,6,0	1/1:33,0:31:15.52:331,16,0	1/1:16,0:16:14.38:122,14,0	0/1:24,0:23:71.10:199,0,71	1/1:21,0:21:4.03:204,4,0	0/1:21,0:19:99:316,0,335	1/1:24,0:24:19.20:134,19,0	0/1:7,2:7:97.81:103,0,98
chr10	36558595	.	C	CTGTGTGTGTGTG	6452.97	PASS	AB=1.000;AC=51;AF=0.911;AN=56;BaseQRankSum=0.669;DP=545;FS=1.228;HRun=0;HaplotypeScore=201.8174;InbreedingCoeff=0.4264;MQ=43.97;MQ0=15;MQRankSum=1.913;QD=12.60;ReadPosRankSum=2.127;VQSLOD=3.7923;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:23:8.99:91,9,0	1/1:7,0:7:6.02:175,6,0	0/0:17,0:8:18.06:0,18,416	0/0:16,0:5:9.03:0,9,195	1/1:32,0:32:2.99:24,3,0	1/1:29,0:28:25.63:689,26,0	1/1:9,0:9:0.47:1,0,0	1/1:33,0:30:24.08:547,24,0	1/1:17,1:18:8.78:208,9,0	1/1:20,0:19:9.50:293,9,0	1/1:24,0:24:11.46:178,11,0	1/1:16,0:16:28:368,28,0	1/1:20,0:20:9.50:153,10,0	1/1:12,0:12:6.01:65,6,0	1/1:15,0:15:2.70:35,3,0	1/1:15,1:15:6.01:133,6,0	1/1:5,1:9:6.02:138,6,0	1/1:9,0:9:5.38:106,5,0	1/1:22,0:20:27.73:467,28,0	1/1:24,0:22:13.33:90,13,0	1/1:15,0:15:15.86:266,16,0	1/1:30,0:28:25.60:441,26,0	1/1:16,0:16:8.99:120,9,0	0/1:26,0:25:40.83:308,0,41	1/1:25,0:25:17.62:292,18,0	1/1:18,2:23:33.09:906,33,0	1/1:26,0:26:19.11:185,19,0	1/1:9,0:7:6.02:173,6,0
chr10	36558606	.	T	TGT	2076.85	PASS	AB=1.000;AC=51;AF=0.911;AN=56;BaseQRankSum=2.260;DP=537;FS=2.740;HRun=0;HaplotypeScore=141.4074;InbreedingCoeff=0.4487;MQ=46.15;MQ0=15;MQRankSum=2.036;QD=4.27;ReadPosRankSum=0.070;VQSLOD=2.4602;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:19:5.99:45,6,0	1/1:7,0:7:5.99:48,6,0	0/0:26,0:12:17.71:0,18,120	0/0:24,0:8:4.68:0,5,63	1/1:29,0:28:2.99:24,3,0	1/1:28,0:27:21.44:176,21,0	0/1:10,0:10:0:0,0,0	1/1:33,0:31:17.84:130,18,0	1/1:16,0:16:7.69:35,8,0	1/1:18,0:17:6:54,6,0	1/1:22,0:22:9.86:74,10,0	1/1:15,0:15:23.72:177,24,0	1/1:21,0:21:10.95:69,11,0	1/1:11,0:11:6:51,6,0	1/1:15,0:15:0.16:0,0,0	1/1:12,0:11:3:25,3,0	1/1:9,0:8:3:28,3,0	1/1:7,0:7:2.22:7,2,0	1/1:19,0:18:22.15:180,22,0	1/1:27,0:25:7.50:37,8,0	1/1:16,0:16:14.67:126,15,0	1/1:32,0:30:17.48:127,17,0	1/1:9,5:15:9:84,9,0	1/1:27,0:26:14.27:233,14,0	1/1:23,0:23:16.70:128,17,0	1/1:21,0:19:28.23:202,28,0	1/1:25,0:25:4.89:94,5,0	1/1:8,0:6:5.68:37,6,0
chr10	36560309	.	CAGAGAGAG	C	1134.64	PASS	AB=0.888;AC=16;AF=0.320;AN=50;BaseQRankSum=-0.896;DP=663;FS=17.532;HRun=0;HaplotypeScore=199.3047;InbreedingCoeff=0.1671;MQ=53.25;MQ0=27;MQRankSum=-3.559;QD=4.16;ReadPosRankSum=-1.922;VQSLOD=1.1056;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:34:18.03:0,18,343	1/1:16,1:14:5.07:113,5,0	./.	0/0:59,0:21:0.47:0,0,1	0/0:15,0:15:14.22:0,14,223	0/0:23,0:25:20.26:0,20,313	0/1:16,2:17:44.77:45,0,83	./.	0/0:25,0:27:25.37:0,25,400	0/0:16,0:15:10.33:0,10,256	./.	0/1:20,0:20:29.64:103,0,30	0/1:22,5:26:24.23:407,0,24	0/1:17,6:24:18.11:114,0,18	0/0:22,0:21:14.93:0,15,236	0/0:26,0:32:26.19:0,26,193	0/0:25,0:27:18.60:0,19,155	0/0:16,0:16:12.03:0,12,302	0/1:15,0:14:14.96:51,0,15	1/1:16,1:17:6.44:52,6,0	0/1:24,0:24:0.20:0,0,0	0/1:20,3:23:6.03:39,0,6	0/1:15,0:23:4.59:26,0,5	0/1:24,0:25:0.11:0,0,0	0/1:11,0:11:22.50:23,0,22	0/0:23,0:20:12.04:0,12,223	1/1:17,5:23:15.05:310,15,0	0/0:8,0:8:5.85:0,6,54
chr10	36562182	.	AGT	A	3215.99	PASS	AB=0.766;AC=23;AF=0.426;AN=54;BaseQRankSum=-6.417;DP=561;FS=15.268;HRun=0;HaplotypeScore=133.0678;InbreedingCoeff=0.6091;MQ=63.34;MQ0=4;MQRankSum=8.488;QD=14.11;ReadPosRankSum=0.577;VQSLOD=2.6098;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:27:4.23:0,4,26	1/1:1,2:3:3.01:34,3,0	./.	0/0:19,0:16:0:0,0,0	0/0:33,0:33:9.01:0,9,88	0/0:17,0:22:21.79:0,22,161	0/0:20,0:21:3.55:0,4,139	0/1:19,8:28:15.29:229,0,15	0/0:21,0:21:18.40:0,18,170	0/0:23,0:25:38.86:0,39,358	0/0:13,0:14:1.77:0,2,4	0/1:5,3:8:29.22:118,0,29	1/1:6,7:13:27.06:293,27,0	1/1:14,6:20:28.83:286,29,0	0/0:21,0:22:15.52:0,16,121	0/0:16,0:15:11.76:0,12,97	0/0:21,0:21:17.73:0,18,123	0/0:16,0:17:17.31:0,17,141	1/1:15,5:20:27.05:301,27,0	1/1:9,6:17:29.75:296,30,0	0/1:17,3:20:72.95:115,0,73	1/1:8,1:9:3.01:34,3,0	1/1:7,5:13:23.81:223,24,0	1/1:18,17:37:68.92:750,69,0	1/1:9,10:20:35.88:361,36,0	0/0:28,0:26:55.73:0,56,413	1/1:9,7:18:38.76:369,39,0	0/0:17,0:17:9.42:0,9,96
chr10	36562218	.	TTTC	T	162.24	PASS	AB=0.871;AC=7;AF=0.125;AN=56;BaseQRankSum=6.638;DP=568;FS=10.853;HRun=0;HaplotypeScore=161.3398;InbreedingCoeff=-0.1800;MQ=60.23;MQ0=11;MQRankSum=-4.059;QD=1.14;ReadPosRankSum=-2.457;VQSLOD=1.5106;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:31.38:0,31,981	0/0:2,0:2:2.80:0,3,41	0/0:42,0:24:72.19:0,72,1416	0/0:43,0:22:54.95:0,55,1150	0/1:20,7:28:32.91:33,0,635	0/0:17,0:16:2.20:0,2,732	0/0:24,0:24:1.76:0,2,958	0/0:25,0:25:70.09:0,70,1400	0/1:25,0:25:9.20:9,0,598	0/0:12,0:12:29.56:0,30,721	0/1:10,0:10:23.40:23,0,317	0/0:13,0:13:33.11:0,33,636	0/0:16,0:16:39.60:0,40,687	0/0:16,0:16:39.83:0,40,734	0/1:18,0:18:26.63:27,0,677	0/1:8,5:12:17.48:17,0,357	0/0:19,2:21:1.77:0,2,628	0/0:10,0:11:9.90:0,10,448	0/0:20,0:20:59.99:0,60,1066	0/0:17,0:17:48.15:0,48,779	0/0:17,0:17:45.15:0,45,933	0/0:4,0:4:12.04:0,12,220	0/0:13,0:13:36.12:0,36,629	0/0:36,0:36:99:0,105,1764	0/0:22,0:22:60.20:0,60,1005	0/1:32,6:36:99:126,0,1613	0/0:23,0:23:69.22:0,69,1198	0/1:6,4:10:52.46:52,0,124
chr10	36562271	.	TTG	T	9964.51	PASS	AB=0.680;AC=51;AF=0.911;AN=56;BaseQRankSum=-2.778;DP=653;FS=5.477;HRun=0;HaplotypeScore=109.9824;InbreedingCoeff=0.6768;MQ=62.32;MQ0=20;MQRankSum=3.155;QD=19.35;ReadPosRankSum=5.763;VQSLOD=4.7864;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,0:30:46.34:226,46,0	1/1:0,3:4:8.86:86,9,0	0/0:71,0:28:28.63:0,29,334	0/0:67,0:29:24.55:0,25,355	1/1:4,18:21:47.67:557,48,0	1/1:3,0:12:22.73:112,23,0	1/1:4,0:22:37.68:177,38,0	1/1:16,12:28:0.97:378,1,0	1/1:5,23:28:63.19:751,63,0	1/1:6,0:18:34.86:163,35,0	1/1:4,0:16:23.57:114,24,0	1/1:4,8:12:21.06:250,21,0	1/1:3,16:19:36.11:429,36,0	1/1:3,26:30:75.06:872,75,0	1/1:3,0:24:46.34:226,46,0	1/1:4,12:16:36.11:429,36,0	1/1:2,16:18:33.10:393,33,0	0/1:9,0:17:66.04:66,0,71	1/1:8,13:21:38.17:463,38,0	1/1:5,8:13:24.07:286,24,0	1/1:7,20:27:48.15:572,48,0	1/1:1,8:9:15:163,15,0	1/1:1,10:11:27.08:322,27,0	1/1:11,20:31:60.18:715,60,0	1/1:6,19:25:57.13:664,57,0	1/1:12,19:32:62.96:713,63,0	1/1:4,17:22:54:622,54,0	1/1:0,7:7:18.06:215,18,0
chr10	36563254	.	ACTT	A	8567.15	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=16.248;DP=855;FS=12.099;HRun=0;HaplotypeScore=123.0448;InbreedingCoeff=0.9934;MQ=70.22;MQ0=0;MQRankSum=-5.122;QD=37.25;ReadPosRankSum=3.572;VQSLOD=5.5980;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,58:66:99:2358,147,0	0/0:12,0:12:30.10:0,30,662	0/0:29,0:29:71.41:0,71,1519	0/0:32,0:33:73.66:0,74,1422	0/0:29,0:29:81.28:0,81,1789	1/1:0,23:23:63.21:1011,63,0	1/1:2,23:23:54.18:868,54,0	0/0:31,0:31:78.27:0,78,1698	0/0:34,0:34:99:0,102,2236	1/1:3,31:31:84.25:1295,84,0	1/1:1,20:18:45.15:723,45,0	0/0:37,0:37:99:0,111,2411	0/0:33,0:33:93.32:0,93,2049	0/0:34,0:34:99:0,99,2121	1/1:1,39:40:99:1782,111,0	0/0:31,0:31:90.31:0,90,1978	0/0:37,0:37:99:0,108,2367	1/1:4,17:21:33.11:530,33,0	0/0:28,0:28:72.22:0,72,1493	0/0:23,0:23:69.24:0,69,1524	0/0:61,0:61:99:0,172,3774	0/0:35,0:35:99:0,99,2167	0/0:28,0:28:84.29:0,84,1854	0/0:24,0:24:69.24:0,69,1519	0/0:22,0:22:60.21:0,60,1307	0/0:34,2:36:11.95:0,12,2114	0/0:21,0:21:63.21:0,63,1351	0/0:7,0:7:21.07:0,21,460
chr10	36567562	.	T	TTAACTAACTAACTAAC	22675.97	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=0.676;DP=543;FS=6.802;HRun=0;HaplotypeScore=192.2453;InbreedingCoeff=0.6165;MQ=62.70;MQ0=3;MQRankSum=-4.633;QD=46.37;ReadPosRankSum=2.079;VQSLOD=3.9694;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:17:6.02:370,6,0	1/1:7,0:7:9.03:345,9,0	0/0:29,0:29:15.03:0,15,309	0/0:22,0:22:18.06:0,18,488	1/1:13,10:23:33.04:1681,33,0	1/1:13,0:13:12.04:810,12,0	1/1:14,0:14:33.11:833,33,0	1/1:42,0:40:58:875,58,0	1/1:13,10:24:24.08:1687,24,0	1/1:13,0:13:18.05:604,18,0	1/1:15,0:15:3.01:217,3,0	1/1:11,0:11:9.03:554,9,0	1/1:22,0:22:27.09:1038,27,0	1/1:10,0:10:3.01:112,3,0	1/1:25,0:25:9.03:580,9,0	1/1:17,15:34:51.18:3830,51,0	1/1:6,2:8:6.02:431,6,0	1/1:11,0:11:12:472,12,0	1/1:22,0:21:9.03:227,9,0	1/1:25,0:25:36.12:1138,36,0	1/1:14,0:14:11.85:108,12,0	1/1:20,0:20:29.88:892,30,0	1/1:19,0:19:18.06:1222,18,0	1/1:13,0:13:26.85:721,27,0	1/1:21,0:21:15.05:588,15,0	1/1:15,10:29:60.18:2379,60,0	1/1:29,0:29:15.05:575,15,0	1/1:5,1:7:6.02:389,6,0
chr10	36567583	.	T	TAACTAACTAACTAACC	19746.91	PASS	AB=1.000;AC=46;AF=0.821;AN=56;BaseQRankSum=-1.277;DP=520;FS=2.846;HRun=0;HaplotypeScore=127.3054;InbreedingCoeff=0.2126;MQ=42.98;MQ0=23;MQRankSum=-1.483;QD=39.89;ReadPosRankSum=-1.579;VQSLOD=3.9626;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:3,10:14:3.01:199,3,0	1/1:1,0:5:9.03:397,9,0	0/0:15,0:9:21:0,21,353	0/0:10,0:8:21.07:0,21,514	0/1:19,0:19:99:564,0,147	1/1:0,13:16:12.04:882,12,0	1/1:17,0:16:44.77:716,45,0	1/1:37,0:34:86.81:815,87,0	0/1:18,0:18:99:558,0,132	1/1:1,14:20:44.90:1561,45,0	1/1:3,12:15:8.95:322,9,0	1/1:0,12:15:9.03:605,9,0	1/1:0,0:24:27.09:1194,27,0	1/1:0,0:9:3.01:129,3,0	1/1:2,20:31:9.03:634,9,0	0/1:28,0:27:99:1994,0,128	0/1:9,0:7:2.36:613,0,2	1/1:12,0:9:26.83:465,27,0	1/1:6,0:23:56.91:959,57,0	1/1:2,0:24:42:1331,42,0	1/1:10,0:10:14.84:131,15,0	1/1:1,0:19:32.81:1031,33,0	1/1:2,19:26:18.06:1329,18,0	1/1:14,0:14:30.16:588,30,0	1/1:0,0:29:15.05:675,15,0	0/1:23,0:22:99:1189,0,129	1/1:2,0:25:15.05:665,15,0	0/1:4,0:3:13.98:202,0,14
chr10	36570238	.	A	AT	4044.95	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-14.181;DP=679;FS=5.143;HRun=8;HaplotypeScore=62.8659;InbreedingCoeff=0.9835;MQ=69.24;MQ0=2;MQRankSum=0.071;QD=26.44;ReadPosRankSum=1.003;VQSLOD=4.5278;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,129,1175	0/0:10,0:10:24.01:0,24,220	0/0:18,0:15:8.82:0,9,272	0/0:11,0:9:15.01:0,15,137	1/1:4,27:31:75.18:846,75,0	0/0:31,0:31:84.02:0,84,760	0/0:35,0:33:90.03:0,90,823	0/0:26,0:26:56.94:0,57,512	1/1:3,20:23:48.14:554,48,0	0/0:26,0:26:66.03:0,66,604	0/0:22,0:22:57.01:0,57,515	0/0:22,0:22:57:0,57,516	0/0:22,0:22:63.03:0,63,576	0/0:22,0:22:66.04:0,66,604	0/0:30,0:30:75:0,75,677	1/1:4,19:23:51.14:578,51,0	1/1:1,26:27:72.21:831,72,0	0/0:11,0:11:24:0,24,220	0/0:18,0:18:42:0,42,378	0/0:29,0:29:78.03:0,78,714	0/0:22,0:22:62.98:0,63,567	0/0:21,0:21:51.02:0,51,467	0/0:29,0:29:78.02:0,78,710	0/0:33,0:32:89.85:0,90,811	0/0:16,0:16:48.01:0,48,433	1/1:5,28:33:62.58:925,63,0	0/0:23,0:23:63.03:0,63,577	1/1:2,13:15:27.08:312,27,0
chr10	36571190	.	AGTGTGTGTGTGTGT	A	4303.46	PASS	AB=0.679;AC=22;AF=0.393;AN=56;BaseQRankSum=5.463;DP=574;FS=11.986;HRun=0;HaplotypeScore=218.3671;InbreedingCoeff=0.6272;MQ=62.68;MQ0=12;MQRankSum=-6.753;QD=19.04;ReadPosRankSum=1.715;VQSLOD=2.4544;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:27:39.13:0,39,2388	1/1:6,4:10:11.87:367,12,0	0/0:30,0:19:9.03:0,9,187	0/0:27,0:16:3.01:0,3,82	0/0:16,0:16:9.49:0,9,284	0/0:22,0:21:15.52:0,16,925	0/0:31,0:31:18.06:0,18,863	1/1:22,0:21:3.01:52,3,0	0/0:21,0:20:15.05:0,15,683	0/0:25,0:25:57.20:0,57,2894	0/0:11,0:11:12.04:0,12,714	0/1:6,0:23:96.05:152,0,96	1/1:8,9:17:21.07:823,21,0	1/1:13,13:24:24.08:940,24,0	0/0:23,0:25:5.91:0,6,382	0/0:15,0:15:3.01:0,3,43	0/0:30,0:30:25.96:0,26,1368	0/0:30,0:28:31.34:0,31,1654	1/1:13,2:15:5.85:235,6,0	1/1:15,2:17:6.02:235,6,0	1/1:28,0:27:6:52,6,0	1/1:8,2:10:6.02:235,6,0	0/0:2,0:4:6.02:0,6,94	0/1:21,2:29:99:155,0,229	1/1:8,5:13:12.04:470,12,0	0/0:25,0:25:39.13:0,39,2161	1/1:10,6:15:15.05:588,15,0	0/0:5,0:5:3.89:0,4,185
chr10	36571467	.	A	AC	21381.09	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-5.501;DP=604;FS=0.000;HRun=1;HaplotypeScore=82.9737;InbreedingCoeff=0.9989;MQ=87.56;MQ0=0;MQRankSum=-10.204;QD=38.11;ReadPosRankSum=6.642;VQSLOD=4.7066;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,43:45:99:1796,120,0	1/1:2,19:21:54.18:808,54,0	0/0:15,0:15:42.02:0,42,451	0/0:28,0:28:60.98:0,61,822	1/1:1,21:22:59.84:897,60,0	1/1:0,19:19:45.15:674,45,0	1/1:0,16:16:36.12:539,36,0	1/1:1,25:26:75.20:1090,75,0	1/1:1,19:20:54.18:808,54,0	1/1:0,21:21:63.17:898,63,0	1/1:1,13:14:36.04:511,36,0	1/1:0,21:21:51.17:764,51,0	1/1:0,18:18:39.13:583,39,0	1/1:1,15:16:39.13:584,39,0	1/1:0,29:28:72.24:1078,72,0	1/1:1,22:23:57.19:854,57,0	1/1:0,19:19:47.99:719,48,0	1/1:0,12:12:30.10:440,30,0	1/1:0,22:22:63.20:921,63,0	1/1:0,27:27:75.20:1088,75,0	1/1:0,33:33:87.29:1303,87,0	1/1:0,16:16:42.14:619,42,0	1/1:1,17:18:44.72:673,45,0	1/1:1,29:30:72.24:1078,72,0	1/1:0,17:17:36.12:539,36,0	1/1:3,20:23:60.01:866,60,0	1/1:0,24:24:57.14:847,57,0	1/1:0,9:9:27.09:404,27,0
chr10	36572470	.	ACC	A	19220.64	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=13.053;DP=659;FS=12.651;HRun=3;HaplotypeScore=80.9038;InbreedingCoeff=0.9995;MQ=81.26;MQ0=1;MQRankSum=-2.736;QD=41.60;ReadPosRankSum=4.723;VQSLOD=3.4893;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:60.21:0,60,1141	1/1:0,16:16:45.15:689,45,0	0/0:24,0:24:72.24:0,72,1334	0/0:11,0:11:27.07:0,27,477	1/1:0,34:34:93.31:1398,93,0	0/0:24,0:24:66.23:0,66,1275	0/0:15,0:15:45.15:0,45,869	1/1:1,25:26:75.24:1128,75,0	1/1:0,21:21:54.18:827,54,0	0/0:24,0:24:69.24:0,69,1306	0/0:34,0:34:99:0,102,1948	1/1:0,25:25:69.23:1057,69,0	1/1:0,29:29:81.28:1240,81,0	1/1:2,28:30:78.26:1195,78,0	0/0:32,0:32:96.33:0,96,1853	1/1:0,34:34:93.32:1425,93,0	1/1:0,13:13:36.12:551,36,0	0/0:13,0:13:36.12:0,36,672	1/1:0,21:21:60.19:898,60,0	1/1:0,30:30:87.30:1332,87,0	1/1:1,19:20:48.16:735,48,0	1/1:1,22:22:48.16:725,48,0	1/1:0,20:20:54.15:827,54,0	1/1:0,10:10:24.08:368,24,0	1/1:0,25:25:75.25:1149,75,0	1/1:0,30:30:90.31:1379,90,0	1/1:2,29:31:78.26:1195,78,0	1/1:0,24:24:72.24:1103,72,0
chr10	36572839	.	AGT	A	624.83	PASS	AB=0.834;AC=38;AF=0.905;AN=42;BaseQRankSum=2.832;DP=550;FS=0.000;HRun=0;HaplotypeScore=95.2855;InbreedingCoeff=0.1310;MQ=62.52;MQ0=15;MQRankSum=-1.688;QD=1.71;ReadPosRankSum=0.372;VQSLOD=1.6517;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:27:6:56,6,0	./.	./.	./.	1/1:22,3:25:5.25:63,5,0	./.	1/1:20,5:24:5.43:63,5,0	./.	1/1:8,2:10:2.69:31,3,0	1/1:17,0:16:2.80:32,3,0	1/1:26,0:25:3.01:32,3,0	1/1:10,0:18:2.40:14,2,0	1/1:9,0:13:8.48:41,8,0	0/1:7,0:9:0:0,0,0	1/1:12,3:15:6.02:64,6,0	1/1:8,4:11:11.86:109,12,0	0/1:28,6:34:18.84:83,0,19	1/1:13,0:14:2.84:14,3,0	1/1:15,0:16:2.84:14,3,0	1/1:19,0:19:2.84:14,3,0	1/1:30,0:30:2.50:14,3,0	./.	1/1:12,0:12:2.84:14,3,0	0/0:35,0:34:30.06:0,30,396	1/1:15,0:20:2.80:13,3,0	./.	1/1:7,0:10:5.18:27,5,0	1/1:9,2:11:3.01:32,3,0
chr10	36573030	.	G	GGA	18511.21	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-14.509;DP=563;FS=3.962;HRun=0;HaplotypeScore=57.8634;InbreedingCoeff=0.9978;MQ=82.16;MQ0=1;MQRankSum=-2.475;QD=50.44;ReadPosRankSum=4.516;VQSLOD=5.9362;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,105,1483	1/1:0,6:6:18.06:364,18,0	0/0:25,0:25:63.12:0,63,927	0/0:22,0:21:47.24:0,47,708	1/1:1,25:27:78.13:1475,78,0	0/0:27,0:27:81.17:0,81,1179	0/0:18,0:18:54.18:0,54,848	1/1:1,26:30:87.25:1595,87,0	1/1:0,13:13:33.11:666,33,0	0/0:22,0:22:57.17:0,57,861	0/0:17,0:17:51.17:0,51,826	1/1:0,17:16:33.11:662,33,0	1/1:0,20:20:44.99:907,45,0	1/1:0,20:20:45.15:908,45,0	0/0:18,0:18:51.14:0,51,746	1/1:0,11:12:27.09:546,27,0	1/1:0,24:25:66.23:1329,66,0	0/0:11,0:11:30.08:0,30,457	1/1:1,14:15:45:736,45,0	1/1:0,24:25:72.25:1427,72,0	1/1:3,16:19:53.89:1004,54,0	1/1:0,16:16:48.16:949,48,0	1/1:3,19:22:56.92:1060,57,0	1/1:0,21:23:54.19:1092,54,0	1/1:0,24:23:63.22:1271,63,0	1/1:1,24:27:53.23:1367,53,0	1/1:0,19:19:36.12:727,36,0	1/1:0,7:7:21.07:425,21,0
chr10	36576015	.	GAAGA	G	3721.44	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=8.105;DP=660;FS=52.893;HRun=0;HaplotypeScore=222.4959;InbreedingCoeff=0.8971;MQ=58.03;MQ0=4;MQRankSum=-3.823;QD=20.12;ReadPosRankSum=1.665;VQSLOD=1.5836;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:20,1:21:25.43:333,25,0	0/0:10,0:10:24.08:0,24,407	0/0:29,0:26:40.08:0,40,649	0/0:29,0:18:21.44:0,21,848	0/0:25,0:25:60.16:0,60,1166	1/1:28,0:28:29.28:857,29,0	1/1:11,13:24:14.99:195,15,0	0/0:23,0:23:39.13:0,39,866	0/0:17,0:17:27.09:0,27,478	1/1:12,12:24:12.06:440,12,0	1/1:13,11:24:36:488,36,0	0/0:20,0:20:46.41:0,46,950	0/0:25,0:25:29.99:0,30,508	0/0:21,0:21:45.15:0,45,734	1/1:26,0:26:66.05:902,66,0	0/0:28,0:28:45.15:0,45,751	0/0:27,0:27:36.12:0,36,671	1/1:15,0:15:35.67:431,36,0	0/0:18,0:18:30.07:0,30,586	0/0:27,0:27:69.14:0,69,1224	0/0:14,0:14:33.11:0,33,794	0/0:30,0:30:78.26:0,78,1315	0/0:35,0:35:72.71:0,73,1382	0/0:23,0:22:27.09:0,27,524	0/0:26,0:26:42.72:0,43,803	0/1:23,0:23:75.90:76,0,935	0/0:33,0:32:81.17:0,81,1393	0/0:13,0:13:18.06:0,18,275
chr10	36576030	.	GGGAGAGAGAGGGAGGGAGGGA	G	9044.10	PASS	AB=0.885;AC=14;AF=0.250;AN=56;BaseQRankSum=8.026;DP=645;FS=42.595;HRun=0;HaplotypeScore=372.2858;InbreedingCoeff=0.7941;MQ=48.65;MQ0=14;MQRankSum=-4.256;QD=58.73;ReadPosRankSum=4.926;VQSLOD=3.1229;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,5:15:35.91:1329,36,0	0/0:11,0:11:24.04:0,24,867	0/0:35,0:16:36.12:0,36,1496	0/0:37,0:16:42.79:0,43,1429	0/0:30,0:30:75.25:0,75,2429	1/1:15,10:24:36.93:1726,37,0	1/1:13,4:17:8.86:563,9,0	0/0:26,0:25:72.24:0,72,2222	0/0:16,0:16:33.11:0,33,1368	0/1:13,4:17:22.66:741,0,23	1/1:12,11:23:39.13:1776,39,0	0/0:19,0:19:51.17:0,51,1756	0/0:24,0:24:39.03:0,39,1393	0/0:20,0:20:48.16:0,48,2147	1/1:11,9:19:45.43:1787,45,0	0/0:28,0:28:42.14:0,42,1862	0/0:25,0:25:39.13:0,39,1608	1/1:9,3:12:17.50:901,18,0	0/0:20,0:18:54.18:0,54,1937	0/0:27,0:27:78.25:0,78,2624	0/0:11,0:11:29.75:0,30,968	0/0:30,0:30:57.19:0,57,1954	0/0:34,0:34:77.36:0,77,2998	0/0:27,0:26:20.15:0,20,616	0/0:25,0:25:48.15:0,48,1661	0/1:23,1:24:99:220,0,2313	0/0:32,0:31:87.30:0,87,3285	0/0:14,0:14:21.07:0,21,976
chr10	36576045	.	GGAGGGA	G	17046.59	PASS	AB=1.000;AC=52;AF=0.929;AN=56;BaseQRankSum=3.128;DP=616;FS=2.712;HRun=0;HaplotypeScore=181.3047;InbreedingCoeff=0.4960;MQ=44.30;MQ0=20;MQRankSum=-2.513;QD=29.70;ReadPosRankSum=6.262;VQSLOD=4.3878;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:11:13.18:333,13,0	1/1:0,12:12:21.07:458,21,0	0/1:39,0:12:15.91:16,0,381	0/0:42,0:13:33.95:0,34,434	1/1:4,24:29:45.15:950,45,0	1/1:16,0:15:25.02:471,25,0	1/1:14,0:14:14.96:203,15,0	1/1:4,30:31:75.05:1087,75,0	1/1:1,17:18:27.09:600,27,0	0/1:14,0:14:0.71:213,0,1	1/1:20,0:19:33.91:587,34,0	1/1:2,13:16:30.10:618,30,0	1/1:3,21:24:30.10:686,30,0	1/1:1,20:21:39.13:917,39,0	1/1:14,0:13:19.36:476,19,0	1/1:1,25:26:36.12:824,36,0	1/1:2,22:24:24.55:561,25,0	1/1:8,0:8:13.66:268,14,0	1/1:6,14:18:45.01:715,45,0	1/1:1,24:25:48.16:1125,48,0	1/1:13,0:13:14.55:144,15,0	1/1:3,22:27:44.36:869,44,0	1/1:5,26:33:41.56:970,42,0	1/1:2,19:21:9.33:212,9,0	1/1:3,22:25:32.94:706,33,0	1/1:2,23:25:69.12:1196,69,0	1/1:1,24:26:60.21:1349,60,0	1/1:0,16:16:21.07:493,21,0
chr10	36576049	.	GGA	G	5587.96	PASS	AB=0.949;AC=52;AF=0.929;AN=56;BaseQRankSum=2.581;DP=588;FS=12.373;HRun=0;HaplotypeScore=191.4486;InbreedingCoeff=0.4059;MQ=47.61;MQ0=19;MQRankSum=-3.451;QD=10.23;ReadPosRankSum=5.103;VQSLOD=3.1519;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,1:12:0.38:161,0,0	1/1:12,0:12:20.78:153,21,0	0/1:39,1:12:22.07:22,0,132	0/0:42,0:14:16.82:0,17,221	1/1:26,0:26:41.41:309,41,0	1/1:18,0:17:27.39:252,27,0	1/1:8,0:8:14.70:138,15,0	1/1:34,0:31:43.47:427,43,0	1/1:18,0:18:23.61:148,24,0	1/1:8,0:8:15.02:146,15,0	1/1:18,0:17:11.07:302,11,0	1/1:15,0:15:16.45:135,16,0	1/1:22,0:22:29.70:227,30,0	1/1:20,0:20:38.40:241,38,0	1/1:14,0:13:27.01:252,27,0	1/1:26,0:26:35.31:218,35,0	1/1:23,0:23:22.82:147,23,0	1/1:7,2:9:15.51:159,16,0	1/1:19,0:16:29.55:208,30,0	1/1:24,0:24:47.30:310,47,0	0/1:11,1:12:1.10:54,0,1	1/1:26,0:26:21.76:226,22,0	1/1:29,0:29:40.59:248,41,0	1/1:22,0:21:9.64:57,10,0	1/1:24,0:25:19.61:170,20,0	1/1:25,0:25:48.43:382,48,0	1/1:25,0:24:56.04:352,56,0	1/1:16,0:16:20.74:142,21,0
chr10	36576050	.	GA	G	1800.40	PASS	AB=0.984;AC=36;AF=0.643;AN=56;BaseQRankSum=4.319;DP=594;FS=3.706;HRun=1;HaplotypeScore=199.6759;InbreedingCoeff=-0.2422;MQ=47.50;MQ0=19;MQRankSum=-5.186;QD=3.52;ReadPosRankSum=8.999;VQSLOD=-0.2459;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:11,1:12:76.27:113,0,76	1/1:12,0:12:14.16:50,14,0	0/0:39,0:11:19.55:0,20,281	0/0:43,0:14:29.38:0,29,398	1/1:26,0:26:9.23:78,9,0	0/1:15,4:18:64.41:141,0,64	0/1:10,0:10:12.96:55,0,13	0/1:34,0:31:14.82:15,0,254	0/1:18,0:18:2.24:43,0,2	0/1:8,0:8:17.40:68,0,17	0/1:18,0:17:29.17:196,0,29	0/1:15,0:15:37.71:38,0,41	1/1:22,0:22:21.43:74,21,0	1/1:20,0:20:30.95:110,31,0	0/1:15,0:14:73.35:143,0,73	1/1:26,0:26:24.79:91,25,0	0/1:23,0:23:14.85:42,0,15	0/1:11,0:11:75.20:86,0,75	0/1:19,0:16:28.34:28,0,118	1/1:24,0:24:37.46:131,37,0	0/1:12,0:12:12.51:13,0,88	0/1:26,0:26:27.17:49,0,27	0/1:29,0:29:21.84:72,0,22	1/1:22,0:21:7.13:26,7,0	1/1:25,0:25:4.74:57,5,0	0/1:25,0:25:67.34:67,0,92	1/1:25,0:24:23.09:128,23,0	1/1:16,0:16:16.45:58,16,0
chr10	36576443	.	T	TG	6168.83	PASS	AB=0.616;AC=24;AF=0.429;AN=56;BaseQRankSum=-3.038;DP=636;FS=7.583;HRun=9;HaplotypeScore=84.7728;InbreedingCoeff=-0.0267;MQ=86.60;MQ0=0;MQRankSum=-0.757;QD=14.72;ReadPosRankSum=0.876;VQSLOD=4.7336;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:37:89.01:0,89,759	0/1:3,6:9:8.01:148,0,8	0/0:23,0:24:14.73:0,15,284	0/0:22,0:22:10.75:0,11,254	0/1:10,17:27:55.92:338,0,56	0/0:18,0:18:35.98:0,36,312	0/0:22,0:24:58.05:0,58,480	1/1:17,12:29:10.50:310,11,0	0/1:6,16:22:9.99:356,0,10	0/0:32,0:32:65.95:0,66,570	0/0:18,0:18:47.99:0,48,416	0/1:3,23:27:1.91:474,0,2	0/1:13,11:24:99:193,0,113	1/1:6,19:25:8.04:538,8,0	0/0:23,0:24:53.01:0,53,448	0/1:7,12:19:22.29:235,0,22	0/1:10,16:26:27.03:413,0,27	0/0:17,1:18:8.80:0,9,305	1/1:5,12:17:10.04:339,10,0	0/1:8,17:25:53.12:367,0,53	0/1:11,17:28:72:368,0,72	1/1:6,14:21:12.88:351,13,0	0/1:9,8:17:58.13:140,0,58	0/1:10,12:21:30.04:383,0,30	0/1:7,10:18:78.05:167,0,78	0/1:10,19:29:66.97:456,0,67	0/1:9,22:31:15.21:534,0,15	1/1:1,2:3:6:57,6,0
chr10	36576969	.	GACACAC	G	6526.53	PASS	AB=0.608;AC=42;AF=0.778;AN=54;BaseQRankSum=4.197;DP=749;FS=5.794;HRun=0;HaplotypeScore=211.4107;InbreedingCoeff=0.4199;MQ=48.73;MQ0=25;MQRankSum=-4.980;QD=11.76;ReadPosRankSum=1.535;VQSLOD=3.4053;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:32:16.41:212,16,0	1/1:4,8:12:18.06:377,18,0	./.	0/0:62,0:11:5.91:0,6,53	1/1:11,2:34:13.34:24,13,0	1/1:7,0:24:21.07:293,21,0	1/1:7,0:21:6.02:84,6,0	1/1:35,7:41:2.09:227,2,0	0/1:9,1:21:9.98:63,0,10	1/1:9,0:29:15.58:634,16,0	1/1:3,0:20:18.53:253,19,0	0/0:7,0:21:35.36:0,35,454	1/1:5,14:19:24.05:461,24,0	1/1:5,15:22:21.07:398,21,0	1/1:11,0:27:12.15:437,12,0	1/1:12,3:37:17.18:88,17,0	0/1:7,1:28:5.44:5,0,100	0/1:4,0:9:35.15:75,0,35	1/1:7,7:13:20.91:330,21,0	1/1:10,17:28:30.57:607,31,0	1/1:7,9:16:4.42:65,4,0	1/1:7,15:24:21.96:400,22,0	0/1:8,1:27:19.21:19,0,510	0/0:7,0:31:44.61:0,45,610	1/1:3,26:32:42.14:817,42,0	0/0:3,0:18:0.14:0,0,50	1/1:7,14:22:14.13:649,14,0	1/1:3,0:13:5.01:10,5,0
chr10	36580870	.	G	GA	13254.75	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-13.895;DP=619;FS=14.636;HRun=7;HaplotypeScore=58.9039;InbreedingCoeff=0.9725;MQ=79.96;MQ0=0;MQRankSum=-2.391;QD=31.48;ReadPosRankSum=0.995;VQSLOD=3.5803;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:85.37:0,85,813	1/1:0,10:10:27.08:326,27,0	0/0:19,0:19:29.06:0,29,310	0/0:13,0:13:8.13:0,8,236	1/1:3,33:36:93.29:1124,93,0	0/0:19,0:19:54.09:0,54,521	0/0:19,0:19:51.08:0,51,493	1/1:4,19:23:57.16:676,57,0	1/1:2,14:16:39.12:471,39,0	0/0:22,0:22:60.09:0,60,579	0/0:33,0:33:93.14:0,93,898	1/1:2,22:24:66.20:797,66,0	1/1:1,15:16:42.13:507,42,0	1/1:2,15:17:45.14:544,45,0	0/0:24,0:24:72.12:0,72,695	1/1:0,25:25:75.23:906,75,0	1/1:2,14:16:39.12:471,39,0	0/0:16,0:16:42.06:0,42,405	1/1:5,21:26:63.19:761,63,0	1/1:2,33:35:99:1157,99,0	1/1:2,20:22:54.17:652,54,0	1/1:3,19:22:54.12:636,54,0	1/1:2,21:24:62.98:739,63,0	1/1:2,19:21:54.17:652,54,0	1/1:1,22:23:63.19:761,63,0	1/1:4,30:34:64.30:1058,64,0	1/1:3,26:29:78.24:942,78,0	1/1:0,2:2:6.02:72,6,0
chr10	36581024	.	TA	T	9574.91	PASS	AB=0.734;AC=52;AF=0.929;AN=56;BaseQRankSum=-6.213;DP=563;FS=4.581;HRun=11;HaplotypeScore=61.6653;InbreedingCoeff=0.6116;MQ=77.87;MQ0=2;MQRankSum=-3.948;QD=17.63;ReadPosRankSum=4.867;VQSLOD=5.7623;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,11:15:28.90:233,29,0	0/1:2,7:9:11.01:127,0,11	0/0:19,0:17:20.79:0,21,168	0/1:17,1:17:1.65:2,0,194	1/1:6,29:34:68.84:566,69,0	1/1:1,17:18:47.94:394,48,0	1/1:1,9:10:20.97:172,21,0	1/1:8,19:28:61.95:497,62,0	1/1:3,11:14:32.95:271,33,0	1/1:6,21:27:59.73:480,60,0	1/1:1,20:23:63.84:494,64,0	1/1:2,12:14:38.90:314,39,0	1/1:4,14:18:35.94:296,36,0	1/1:2,15:17:35.95:296,36,0	1/1:4,16:20:43.80:388,44,0	1/1:3,13:16:32.95:271,33,0	1/1:3,20:23:50.94:419,51,0	1/1:3,16:19:41.95:345,42,0	1/1:5,13:18:35.88:286,36,0	1/1:8,25:33:68.88:566,69,0	1/1:3,8:11:32.84:259,33,0	1/1:1,21:22:56.90:468,57,0	1/1:3,19:22:44.92:369,45,0	1/1:1,8:9:17.98:148,18,0	1/1:1,25:26:68.92:567,69,0	1/1:4,21:26:33.27:462,33,0	1/1:8,29:36:83.88:690,84,0	1/1:5,9:14:23.94:197,24,0
chr10	36583037	.	CTCTT	C	15838.14	PASS	AB=0.526;AC=37;AF=0.661;AN=56;BaseQRankSum=12.483;DP=600;FS=5.585;HRun=0;HaplotypeScore=113.9478;InbreedingCoeff=0.9112;MQ=69.56;MQ0=0;MQRankSum=-7.926;QD=42.69;ReadPosRankSum=3.490;VQSLOD=5.4265;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,135,3504	1/1:0,7:7:21.07:376,21,0	0/0:18,0:18:54.18:0,54,1405	0/0:32,0:31:57.19:0,57,1981	1/1:1,17:18:36.12:680,36,0	0/0:20,0:20:60.21:0,60,1562	0/0:23,0:23:60.21:0,60,1615	1/1:6,20:22:48.11:826,48,0	1/1:0,17:17:42.14:777,42,0	0/0:24,0:24:69.24:0,69,1783	0/0:13,0:13:36.12:0,36,972	1/1:1,26:27:69.24:1289,69,0	1/1:0,18:18:54.19:1024,54,0	1/1:0,16:17:45.15:851,45,0	0/0:31,0:31:87.30:0,87,2304	1/1:1,18:19:45.15:851,45,0	1/1:2,26:28:49.23:1212,49,0	0/0:21,0:21:63.22:0,63,1669	1/1:3,25:27:75.24:1377,75,0	1/1:0,25:25:57.19:1031,57,0	1/1:3,24:27:42.62:795,43,0	1/1:0,12:12:33.11:598,33,0	1/1:2,16:18:42.14:767,42,0	1/1:4,24:28:48.14:911,48,0	1/1:0,19:19:45.15:851,45,0	0/1:2,18:20:23.82:957,0,24	1/1:2,12:14:27.09:511,27,0	1/1:0,3:3:9.03:153,9,0
chr10	36584135	.	GGATGCTGT	G	586.49	PASS	AB=1.000;AC=19;AF=0.365;AN=52;BaseQRankSum=-0.380;DP=655;FS=45.411;HRun=0;HaplotypeScore=138.2609;InbreedingCoeff=-0.4502;MQ=33.43;MQ0=104;MQRankSum=3.226;QD=1.41;ReadPosRankSum=4.473;VQSLOD=0.9218;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:14:4.27:0,4,73	0/1:10,0:6:12.02:12,0,132	0/0:53,0:3:8.97:0,9,70	0/0:53,0:2:0.53:0,1,19	0/0:14,0:11:0:0,0,0	0/0:12,0:12:5.97:0,6,66	0/1:23,0:16:8.37:8,0,155	0/1:13,0:3:13.98:14,0,67	0/1:38,0:31:7.95:8,0,62	0/1:19,0:14:45.61:46,0,279	./.	0/1:30,0:20:5.18:5,0,210	0/1:15,0:10:23.93:24,0,239	0/1:38,0:28:61.90:62,0,303	0/1:29,0:21:50.66:51,0,287	0/0:26,0:13:5.75:0,6,43	0/1:19,0:16:49.57:94,0,50	0/1:15,0:11:53.89:54,0,113	0/1:17,0:8:7.96:8,0,167	./.	1/1:42,0:28:25.26:194,25,0	0/1:19,0:15:7.42:7,0,59	0/1:18,0:13:35.29:58,0,35	0/1:33,0:23:52.29:52,0,98	0/1:27,0:15:16.97:17,0,66	0/0:20,0:15:9.98:0,10,215	0/1:12,0:7:14.98:15,0,56	0/0:14,0:8:2.96:0,3,19
chr10	36584836	.	GCTGGAATA	G	42.27	PASS	AB=0.963;AC=5;AF=0.109;AN=46;BaseQRankSum=0.214;DP=277;FS=0.000;HRun=0;HaplotypeScore=34.7962;InbreedingCoeff=-0.0064;MQ=44.95;MQ0=85;MQRankSum=0.530;QD=0.35;ReadPosRankSum=-2.650;VQSLOD=0.6681;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:6:6.02:0,6,92	./.	0/1:47,0:5:6.83:7,0,123	0/1:49,0:4:25.13:25,0,101	0/0:7,0:2:3.01:0,3,36	0/0:2,0:1:3.01:0,3,36	0/0:11,1:2:3.01:0,3,36	0/0:4,0:1:3.01:0,3,76	0/0:12,0:4:6.02:0,6,109	0/0:17,0:5:15.01:0,15,333	./.	0/0:4,5:6:6.02:0,6,90	0/0:2,0:1:3.01:0,3,36	0/0:2,0:1:3.01:0,3,40	./.	0/0:12,0:5:8.15:0,8,84	0/0:8,0:6:12.04:0,12,225	0/0:5,0:3:3.01:0,3,63	1/1:5,4:4:8.96:85,9,0	./.	0/0:9,0:9:15.05:0,15,181	0/0:11,0:6:12.04:0,12,147	0/0:4,0:1:3.01:0,3,36	0/0:3,4:6:3.01:0,3,53	0/0:4,0:1:3.01:0,3,38	0/1:14,2:6:29.69:30,0,190	0/0:4,1:1:6.02:0,6,156	./.
chr10	36585231	.	GAT	G	357.24	PASS	AB=0.762;AC=8;AF=0.222;AN=36;BaseQRankSum=6.395;DP=601;FS=10.200;HRun=0;HaplotypeScore=88.9299;InbreedingCoeff=0.0847;MQ=28.26;MQ0=190;MQRankSum=-5.398;QD=4.41;ReadPosRankSum=-2.498;VQSLOD=0.5228;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:30:43.52:0,44,827	./.	./.	./.	1/1:7,1:7:2.89:30,3,0	0/0:24,0:16:24.08:0,24,487	0/0:55,0:36:27.09:0,27,503	./.	0/1:12,8:12:99:218,0,213	0/0:57,0:29:87.30:0,87,1725	0/0:19,0:12:6:0,6,84	./.	./.	./.	0/0:51,0:42:54.14:0,54,1013	0/1:16,3:14:41.35:41,0,272	0/1:7,4:11:18.26:18,0,131	0/0:43,1:38:44.65:0,45,1385	./.	0/0:9,0:2:3.01:0,3,33	0/0:22,0:7:0.90:0,1,17	0/0:11,0:3:3.01:0,3,60	0/0:12,0:3:0:0,0,0	1/1:9,0:5:0.89:2,1,0	./.	0/1:9,5:10:99:151,0,216	0/0:7,0:2:0:0,0,0	./.
chr10	36586017	.	T	TCTGTGATG	5222.76	PASS	AB=0.924;AC=15;AF=0.268;AN=56;BaseQRankSum=-2.548;DP=1511;FS=7.567;HRun=0;HaplotypeScore=380.1171;InbreedingCoeff=0.5444;MQ=65.71;MQ0=14;MQRankSum=-1.210;QD=12.38;ReadPosRankSum=-5.264;VQSLOD=1.4377;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:56:93.36:0,93,2355	0/0:21,0:19:35.06:0,35,582	0/1:67,0:52:99:171,0,134	0/1:55,0:40:1.85:167,0,2	1/1:12,23:36:17.45:231,17,0	0/0:29,0:29:48.12:0,48,896	0/0:33,0:33:45.04:0,45,742	0/0:49,0:43:36.02:0,36,342	1/1:13,22:38:27.09:848,27,0	0/1:62,0:62:13.54:14,0,1404	0/1:23,0:23:25.89:26,0,684	0/0:97,0:93:99:0,186,3153	0/0:87,0:86:99:0,162,3234	0/0:96,0:96:99:0,168,3465	0/0:41,0:41:84.20:0,84,1763	0/1:19,26:48:10.76:1343,0,11	1/1:10,17:26:9.03:219,9,0	0/0:23,0:23:45.11:0,45,894	0/0:52,0:48:46.39:0,46,936	0/0:61,0:58:99:0,104,2219	0/0:131,0:130:99:0,250,5004	0/0:75,0:71:99:0,120,1702	0/0:45,0:43:68.31:0,68,1264	0/0:80,0:79:99:0,177,3243	0/0:70,0:70:99:0,107,2125	1/1:19,32:54:13.81:2082,14,0	0/0:42,0:41:81.09:0,81,1433	1/1:3,4:8:3.01:123,3,0
chr10	36587462	.	T	TAAAA	7018.24	PASS	AB=0.525;AC=11;AF=0.196;AN=56;BaseQRankSum=-3.136;DP=743;FS=0.410;HRun=3;HaplotypeScore=119.4465;InbreedingCoeff=0.8301;MQ=84.76;MQ0=0;MQRankSum=-4.299;QD=64.39;ReadPosRankSum=1.666;VQSLOD=4.4831;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:49:99:0,135,2358	0/0:15,0:15:45.15:0,45,810	0/0:34,0:34:92.96:0,93,1580	0/0:27,0:27:66.03:0,66,1147	1/1:4,17:22:51.17:1290,51,0	0/0:31,0:31:84.27:0,84,1456	0/0:17,0:17:48.15:0,48,834	0/0:34,0:34:99:0,102,1752	1/1:5,19:24:63.22:1687,63,0	0/0:30,0:30:81.28:0,81,1457	0/0:20,0:20:54.17:0,54,943	0/0:17,0:17:48.15:0,48,834	0/0:28,0:28:78.16:0,78,1297	0/0:37,0:37:99:0,105,1850	0/0:28,0:28:78.23:0,78,1337	1/1:2,12:14:36.12:971,36,0	1/1:4,17:22:1.33:1305,1,0	0/0:28,0:28:78.24:0,78,1364	0/0:20,0:20:54.18:0,54,964	0/0:33,0:33:96.31:0,96,1695	0/0:23,0:23:63.21:0,63,1122	0/0:27,0:27:56.69:0,57,996	0/0:35,0:35:84.28:0,84,1497	0/0:36,0:36:99:0,102,1786	0/0:23,0:23:69.24:0,69,1241	0/1:2,18:21:44.76:1360,0,45	0/0:41,0:41:99:0,111,1973	1/1:0,5:5:15.05:405,15,0
chr10	36587675	.	G	GTTTGCTTACGGAGAGACA	67796.29	PASS	AB=1.000;AC=41;AF=0.732;AN=56;BaseQRankSum=-1.138;DP=540;FS=1.985;HRun=0;HaplotypeScore=291.7102;InbreedingCoeff=0.8976;MQ=87.37;MQ0=0;MQRankSum=-13.268;QD=182.74;ReadPosRankSum=3.858;VQSLOD=4.8917;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,5:19:51.18:3849,51,0	1/1:3,1:4:9.03:801,9,0	0/0:28,0:28:81.28:0,81,3400	0/0:31,0:32:77.97:0,78,3068	0/0:14,0:14:36.12:0,36,1569	1/1:8,15:25:72.25:5888,72,0	1/1:20,1:21:54.07:3464,54,0	1/1:18,0:17:48.16:3115,48,0	0/0:33,0:33:93.32:0,93,4591	1/1:10,4:14:39.09:2671,39,0	1/1:5,9:14:30.10:2302,30,0	1/1:15,7:22:57.20:4506,57,0	1/1:10,10:21:63.22:5501,63,0	1/1:12,10:23:57.20:4374,57,0	1/1:11,10:21:57.20:4675,57,0	0/0:24,0:24:66.23:0,66,3457	0/0:25,0:25:66.23:0,66,3222	1/1:4,9:13:33.11:2950,33,0	1/1:3,2:7:21.07:1045,21,0	1/1:10,11:21:51.09:3676,51,0	1/1:12,1:13:21.06:1315,21,0	1/1:16,10:26:69.19:5169,69,0	1/1:11,7:18:45.07:2694,45,0	1/1:6,4:11:27.05:1658,27,0	1/1:8,9:19:45.15:3770,45,0	0/1:22,0:22:99:459,0,2723	1/1:11,6:18:51.18:3913,51,0	0/0:13,0:13:36.12:0,36,1920
chr10	36587729	.	GA	G	15441.35	PASS	AC=54;AF=0.964;AN=56;BaseQRankSum=-2.303;DP=540;FS=0.000;HRun=1;HaplotypeScore=128.5924;InbreedingCoeff=0.7310;MQ=39.93;MQ0=1;MQRankSum=-3.845;QD=29.13;ReadPosRankSum=0.351;VQSLOD=4.4967;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,22:21:39.08:520,39,0	1/1:0,6:6:15.05:209,15,0	1/1:3,16:3:1.20:72,1,0	0/0:5,5:5:11.22:0,11,111	1/1:0,19:17:21.07:292,21,0	1/1:2,19:20:48.16:667,48,0	1/1:0,17:17:24.08:327,24,0	1/1:0,29:14:36.12:499,36,0	1/1:0,24:24:69.23:957,69,0	1/1:0,27:24:66.22:914,66,0	1/1:1,17:18:39.09:511,39,0	1/1:3,24:27:72.23:979,72,0	1/1:2,22:24:66.22:912,66,0	1/1:3,22:25:60.20:822,60,0	1/1:4,21:25:57.17:773,57,0	1/1:1,29:30:72.24:1002,72,0	1/1:1,21:22:44.77:603,45,0	1/1:5,5:10:15.05:207,15,0	1/1:0,8:7:18.06:251,18,0	1/1:2,18:21:54.17:733,54,0	1/1:0,17:14:15.05:197,15,0	1/1:1,23:24:51.06:647,51,0	1/1:2,21:22:48.16:665,48,0	1/1:0,8:8:18.06:250,18,0	1/1:0,16:16:42.14:580,42,0	1/1:0,15:15:39.13:539,39,0	1/1:2,24:26:75.25:1023,75,0	1/1:0,7:7:21.07:292,21,0
chr10	36588280	.	T	TG	4575.32	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=15.527;DP=688;FS=8.205;HRun=1;HaplotypeScore=88.0514;InbreedingCoeff=0.9926;MQ=60.50;MQ0=1;MQRankSum=0.360;QD=40.85;ReadPosRankSum=1.008;VQSLOD=5.0011;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,138,1889	0/0:10,0:10:30.07:0,30,399	0/0:20,0:12:36.12:0,36,503	0/0:17,0:9:21.06:0,21,277	1/1:0,16:17:42.14:669,42,0	0/0:25,0:25:69.23:0,69,963	0/0:20,0:20:60.20:0,60,839	0/0:35,0:35:99:0,102,1409	1/1:0,22:22:54.18:860,54,0	0/0:25,0:25:75.25:0,75,1048	0/0:13,0:13:39.13:0,39,539	0/0:20,0:20:60.20:0,60,838	0/0:38,0:38:99:0,111,1535	0/0:30,0:30:90.30:0,90,1256	0/0:41,0:41:99:0,123,1702	1/1:1,29:30:75.25:1196,75,0	1/1:0,17:17:45.11:716,45,0	0/0:28,0:28:84.28:0,84,1175	0/0:21,0:21:63.21:0,63,870	0/0:22,0:22:66.22:0,66,922	0/0:39,0:39:99:0,108,1507	0/0:17,0:17:51.17:0,51,713	0/0:20,0:20:60.18:0,60,816	0/0:42,0:42:99:0,126,1759	0/0:20,0:20:60.20:0,60,838	1/1:1,17:18:12.21:752,12,0	0/0:25,0:25:75.22:0,75,1014	1/1:0,8:8:24.08:383,24,0
chr10	36588585	.	A	AT	4268.90	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-12.861;DP=587;FS=11.510;HRun=6;HaplotypeScore=54.7700;InbreedingCoeff=0.9982;MQ=79.47;MQ0=0;MQRankSum=0.194;QD=33.61;ReadPosRankSum=1.506;VQSLOD=4.2083;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,15:16:45.14:566,45,0	0/0:8,0:8:21.05:0,21,214	0/0:20,0:20:41.10:0,41,386	0/0:13,0:13:29.25:0,29,271	0/0:25,0:25:63.14:0,63,642	1/1:4,15:19:45.14:566,45,0	1/1:0,12:12:33.11:415,33,0	0/0:27,0:27:60.11:0,60,597	0/0:27,0:27:75.17:0,75,765	1/1:2,26:28:78.22:965,78,0	1/1:1,20:21:60.15:737,60,0	0/0:20,0:20:60.12:0,60,605	0/0:22,0:22:63.04:0,63,613	0/0:18,0:18:48.06:0,48,474	1/1:0,21:21:60.19:755,60,0	0/0:20,0:20:54.09:0,54,541	0/0:24,0:24:69.16:0,69,704	1/1:0,10:10:21.07:264,21,0	0/0:18,0:18:45.09:0,45,454	0/0:32,0:32:96.22:0,96,979	0/0:12,0:12:30.06:0,30,306	0/0:23,0:23:63.13:0,63,638	0/0:29,0:29:72.14:0,72,723	0/0:10,0:10:30.07:0,30,306	0/0:25,0:25:69.16:0,69,704	0/0:33,0:33:93.20:0,93,943	0/0:34,0:34:96.14:0,96,950	0/0:20,0:20:54.07:0,54,539
chr10	36589457	.	CCAAAA	C	1140.36	PASS	AB=0.983;AC=17;AF=0.304;AN=56;BaseQRankSum=11.473;DP=567;FS=4.670;HRun=0;HaplotypeScore=138.1620;InbreedingCoeff=-0.4031;MQ=72.06;MQ0=12;MQRankSum=-9.432;QD=3.62;ReadPosRankSum=8.881;VQSLOD=1.0686;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:18:36.09:0,36,706	0/1:14,0:14:40.25:121,0,40	0/0:50,0:18:34.77:0,35,439	0/0:40,0:14:16.49:0,16,179	0/1:27,0:27:85.18:89,0,85	0/0:32,0:31:90.24:0,90,1973	0/0:15,0:15:42.82:0,43,630	0/1:24,0:24:54.38:54,0,320	0/1:13,0:13:37.59:74,0,38	0/0:23,0:23:65.34:0,65,1099	0/0:24,0:24:69.13:0,69,1294	0/1:12,0:12:13.12:13,0,151	0/1:6,4:9:3.31:3,0,54	0/1:15,0:15:68.98:69,0,113	0/0:14,0:14:36.03:0,36,524	0/1:13,0:13:17.59:18,0,59	0/1:22,0:22:41.42:41,0,150	0/0:15,0:15:39.11:0,39,825	0/1:18,0:18:63.06:63,0,126	0/1:25,0:25:11.96:253,0,12	0/0:5,0:5:14.94:0,15,121	0/1:27,0:27:99:138,0,201	0/1:26,0:26:22.56:23,0,178	0/0:14,0:14:21.66:0,22,136	0/1:22,0:22:99:118,0,139	0/1:18,0:18:51.92:86,0,52	0/1:23,0:23:99:131,0,104	0/1:6,0:6:2.66:3,0,73
chr10	36589458	.	CAAAAA	C	4533.21	PASS	AB=0.599;AC=33;AF=0.589;AN=56;BaseQRankSum=6.300;DP=598;FS=2.599;HRun=19;HaplotypeScore=131.9780;InbreedingCoeff=0.7063;MQ=71.07;MQ0=13;MQRankSum=-5.824;QD=13.86;ReadPosRankSum=9.440;VQSLOD=0.1735;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:25:33.07:0,33,630	1/1:2,10:14:26.30:330,26,0	0/0:52,0:21:32.98:0,33,352	0/0:44,0:15:8.79:0,9,120	1/1:6,0:27:38.92:357,39,0	0/0:32,0:33:78.27:0,78,1760	0/0:17,0:18:25.89:0,26,677	1/1:15,7:24:20.99:287,21,0	0/1:3,0:13:6.96:225,0,7	0/0:25,0:26:54.14:0,54,1048	0/0:21,0:24:48.16:0,48,1119	0/1:6,1:12:4.47:105,0,4	1/1:8,2:9:2.03:41,2,0	1/1:7,6:14:11.80:205,12,0	0/0:12,0:20:18.06:0,18,376	1/1:4,0:13:7.12:82,7,0	1/1:10,0:21:21.71:223,22,0	0/0:15,0:17:39.13:0,39,879	1/1:6,7:18:31.95:309,32,0	1/1:5,15:25:57.72:688,58,0	0/0:4,0:5:2.68:0,3,11	1/1:11,14:27:23.62:367,24,0	0/1:6,4:26:15.70:173,0,16	1/1:5,1:14:9.09:33,9,0	1/1:8,11:22:30.35:363,30,0	1/1:4,0:18:41.64:383,42,0	1/1:7,16:23:20.55:299,21,0	1/1:5,0:6:5.68:62,6,0
chr10	36589974	.	C	CATTG	10307.37	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-10.910;DP=723;FS=1.135;HRun=0;HaplotypeScore=109.0971;InbreedingCoeff=0.9983;MQ=75.60;MQ0=4;MQRankSum=-3.033;QD=64.83;ReadPosRankSum=4.267;VQSLOD=7.2050;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:93.30:0,93,1700	0/0:14,0:14:42.14:0,42,767	0/0:25,0:25:66.20:0,66,1129	0/0:24,0:24:59.93:0,60,980	1/1:1,26:29:72.25:1815,72,0	0/0:33,0:33:99:0,99,1785	0/0:31,0:31:87.28:0,87,1571	0/0:32,0:32:81.27:0,81,1413	1/1:2,34:36:84.29:2261,84,0	0/0:30,0:30:84.23:0,84,1475	0/0:34,0:34:96.33:0,96,1768	0/0:18,0:18:51.15:0,51,902	0/0:23,0:23:69.18:0,69,1210	0/0:19,0:19:57.20:0,57,1081	0/0:35,0:35:99:0,105,1970	1/1:1,26:27:69.24:1858,69,0	1/1:2,24:25:63.22:1699,63,0	0/0:17,0:17:45.13:0,45,784	0/0:23,0:23:66.23:0,66,1206	0/0:35,0:35:96.31:0,96,1736	0/0:24,0:23:57.18:0,57,1048	0/0:32,0:32:87.27:0,87,1567	0/0:24,0:24:72.25:0,72,1314	0/0:12,0:12:36.12:0,36,674	0/0:12,0:12:33.09:0,33,592	1/1:0,29:29:87.29:2190,87,0	0/0:36,0:35:99:0,105,1920	1/1:4,6:10:18.06:486,18,0
chr10	36590366	.	A	AAG	32958.24	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-4.010;DP=658;FS=0.000;HRun=0;HaplotypeScore=93.0855;InbreedingCoeff=0.9822;MQ=77.68;MQ0=4;MQRankSum=-10.690;QD=53.59;ReadPosRankSum=5.975;VQSLOD=5.5698;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,28:30:84.29:1659,84,0	1/1:0,4:4:12.04:244,12,0	0/0:29,0:29:81.27:0,81,1278	0/0:14,0:14:42.14:0,42,659	1/1:2,28:31:87.30:1725,87,0	1/1:1,28:29:78.23:1544,78,0	1/1:1,22:23:66.23:1316,66,0	1/1:1,34:35:99:2034,102,0	1/1:3,28:31:84.29:1674,84,0	1/1:1,27:28:84.29:1705,84,0	1/1:5,13:18:45.15:876,45,0	1/1:0,29:29:84.29:1707,84,0	1/1:0,21:21:60.05:1219,60,0	1/1:0,17:17:48.16:975,48,0	1/1:0,19:20:48.16:974,48,0	1/1:1,25:27:78.27:1569,78,0	1/1:0,21:21:54.19:1097,54,0	1/1:2,18:20:51.17:989,51,0	1/1:1,13:14:36.11:679,36,0	1/1:2,33:35:99:1946,99,0	1/1:1,31:32:81.28:1646,81,0	1/1:0,19:19:54.19:1096,54,0	1/1:0,19:18:42.14:854,42,0	1/1:0,19:19:45.15:914,45,0	1/1:1,23:24:54.18:1068,54,0	1/1:4,28:31:93.28:1812,93,0	1/1:0,25:25:60.21:1219,60,0	1/1:0,7:7:21.07:419,21,0
chr10	36590432	.	TTCTG	T	5090.99	PASS	AB=0.577;AC=11;AF=0.196;AN=56;BaseQRankSum=6.336;DP=624;FS=10.288;HRun=0;HaplotypeScore=146.6714;InbreedingCoeff=0.8985;MQ=64.92;MQ0=1;MQRankSum=-0.106;QD=34.87;ReadPosRankSum=2.305;VQSLOD=4.8573;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:63.67:0,64,1445	0/0:7,0:7:18.06:0,18,443	0/0:21,0:19:36.08:0,36,730	0/0:24,0:23:32.67:0,33,678	1/1:7,20:27:54.15:864,54,0	0/0:31,0:31:72.23:0,72,1724	0/0:12,0:12:30.10:0,30,710	0/0:43,0:43:96.31:0,96,2199	1/1:7,16:23:57.01:842,57,0	0/0:28,0:27:66.20:0,66,1554	0/0:29,0:29:60.21:0,60,1484	0/0:16,0:16:30.09:0,30,649	0/0:18,0:18:51.17:0,51,1218	0/0:28,0:28:66.23:0,66,1569	0/0:14,0:14:36.12:0,36,834	1/1:10,16:26:60.16:920,60,0	1/1:11,16:27:53.94:866,54,0	0/0:19,0:19:45.07:0,45,958	0/0:12,0:12:24.08:0,24,588	0/0:18,0:18:42.14:0,42,1025	0/0:19,0:19:36.11:0,36,848	0/0:16,0:16:39.13:0,39,944	0/0:15,0:15:36.12:0,36,899	0/0:26,0:26:63.22:0,63,1539	0/0:31,0:31:72.25:0,72,1798	0/1:8,22:27:8.75:989,0,9	0/0:21,0:21:57.18:0,57,1176	1/1:2,11:13:36.12:610,36,0
chr10	36590680	.	ATTATCTAT	A	5748.12	PASS	AB=0.949;AC=42;AF=0.778;AN=54;BaseQRankSum=-9.198;DP=512;FS=5.353;HRun=0;HaplotypeScore=159.5320;InbreedingCoeff=-0.0168;MQ=55.67;MQ0=8;MQRankSum=6.085;QD=12.52;ReadPosRankSum=8.378;VQSLOD=2.4244;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:25:99:195,0,230	0/1:6,0:6:32.66:34,0,33	0/0:14,0:4:1.33:0,1,23	0/0:28,0:10:5.41:0,5,58	1/1:22,0:22:2.22:267,2,0	1/1:22,0:22:43.03:435,43,0	1/1:11,0:11:14.85:124,15,0	1/1:36,0:34:98.82:843,99,0	1/1:15,0:15:23.88:192,24,0	0/1:22,0:22:19.36:261,0,19	0/1:23,0:23:9.47:166,0,9	1/1:15,0:15:9.03:160,9,0	1/1:14,0:14:35.91:291,36,0	1/1:19,0:19:28.45:221,28,0	1/1:23,0:22:23.81:327,24,0	1/1:21,0:21:28.89:354,29,0	0/1:20,0:20:28.29:142,0,28	0/1:7,16:23:99:222,0,187	1/1:11,0:10:1.48:153,1,0	1/1:15,0:15:44.92:369,45,0	0/1:7,0:7:6.14:63,0,6	./.	1/1:15,0:14:5.86:96,6,0	1/1:12,0:12:11.05:99,11,0	1/1:32,0:32:9.03:134,9,0	1/1:20,0:19:38.86:324,39,0	0/1:21,0:21:79.54:192,0,80	1/1:8,0:6:11.88:85,12,0
chr10	36590681	.	TTATCTATTTATCTATC	T	5948.67	PASS	AB=0.936;AC=43;AF=0.768;AN=56;BaseQRankSum=-9.439;DP=508;FS=0.593;HRun=0;HaplotypeScore=212.5350;InbreedingCoeff=0.2342;MQ=55.79;MQ0=8;MQRankSum=5.341;QD=13.46;ReadPosRankSum=5.972;VQSLOD=3.3617;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:25:99:199,0,580	1/1:5,0:5:8.96:91,9,0	0/0:14,0:4:2.41:0,2,25	0/0:28,0:10:5.40:0,5,58	1/1:22,0:22:39.25:322,39,0	0/1:22,0:22:51.28:270,0,51	1/1:11,0:11:14.87:124,15,0	1/1:36,0:34:98.82:843,99,0	1/1:14,0:14:23.88:192,24,0	0/1:22,0:22:99:171,0,512	0/1:23,0:23:99:161,0,301	1/1:1,0:15:8.70:87,9,0	1/1:14,0:14:35.91:291,36,0	1/1:18,1:19:29.99:347,30,0	0/1:22,0:22:99:227,0,161	1/1:20,0:20:50.79:436,51,0	0/1:20,0:20:99:135,0,134	0/0:24,0:24:27.08:0,27,452	1/1:11,0:10:24.01:288,24,0	1/1:16,0:16:47.94:427,48,0	1/1:7,0:7:11.95:132,12,0	0/1:2,0:10:0:0,0,0	1/1:5,0:14:5.26:48,5,0	1/1:12,0:12:11.08:99,11,0	1/1:8,24:32:9.03:354,9,0	1/1:18,0:18:29.31:305,29,0	1/1:21,0:21:38.66:315,39,0	1/1:8,0:6:11.88:85,12,0
chr10	36590685	.	CTATT	C	6076.26	PASS	AB=0.996;AC=42;AF=0.778;AN=54;BaseQRankSum=-8.712;DP=503;FS=1.401;HRun=0;HaplotypeScore=129.2096;InbreedingCoeff=-0.0822;MQ=55.86;MQ0=9;MQRankSum=4.526;QD=13.04;ReadPosRankSum=8.910;VQSLOD=3.8129;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:23:46.36:224,0,46	0/1:5,0:5:26.91:34,0,27	0/1:13,0:4:2.09:2,0,21	0/0:25,0:8:5.26:0,5,57	1/1:28,0:28:9.63:266,10,0	1/1:23,0:23:38.82:404,39,0	1/1:11,0:11:14.85:124,15,0	1/1:36,0:34:98.82:843,99,0	0/1:14,0:14:73.41:162,0,73	1/1:16,6:22:40.32:634,40,0	1/1:18,3:21:38.60:431,39,0	1/1:14,0:14:8.96:87,9,0	0/1:15,0:15:13.46:252,0,13	1/1:20,0:20:17.02:248,17,0	1/1:21,1:22:30.21:401,30,0	1/1:18,0:18:11.20:336,11,0	0/1:20,0:20:20.46:192,0,20	1/1:22,0:24:6.79:175,7,0	0/1:11,0:10:7.19:142,0,7	0/1:18,0:18:50.91:315,0,51	0/1:7,0:7:29.10:63,0,29	./.	1/1:12,0:11:4.74:41,5,0	1/1:12,0:12:10.05:96,10,0	1/1:31,0:31:8.60:52,9,0	1/1:17,0:17:27.70:283,28,0	0/1:20,0:20:99:184,0,177	1/1:8,0:5:11.88:85,12,0
chr10	36591215	.	C	CTA	2456.73	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=9.582;DP=423;FS=11.387;HRun=0;HaplotypeScore=99.4203;InbreedingCoeff=0.9108;MQ=66.25;MQ0=1;MQRankSum=-10.550;QD=31.50;ReadPosRankSum=0.813;VQSLOD=5.5244;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,6:11:8.28:196,8,0	0/0:4,0:4:9.03:0,9,137	0/0:14,0:14:42.12:0,42,583	0/0:22,0:16:22.33:0,22,464	0/0:18,0:18:35.99:0,36,551	1/1:4,10:14:34.54:561,35,0	1/1:3,4:7:7.11:115,7,0	0/0:34,0:34:99:0,99,1477	0/0:12,0:12:27.09:0,27,413	1/1:4,8:12:29.80:481,30,0	1/1:4,4:8:13.02:233,13,0	0/0:19,0:19:51.17:0,51,779	0/0:16,0:16:39.13:0,39,596	0/0:17,0:17:48.15:0,48,713	1/1:3,11:14:35.01:572,35,0	0/0:18,0:18:54.17:0,54,803	0/0:24,0:24:69.22:0,69,1032	1/1:3,9:12:32.98:488,33,0	0/0:21,0:21:60.20:0,60,912	0/0:11,0:11:30.10:0,30,449	0/0:11,0:11:30.08:0,30,437	0/0:6,0:6:12.04:0,12,183	0/0:8,0:8:21.07:0,21,321	0/0:16,0:16:45.15:0,45,683	0/0:9,0:9:27.09:0,27,413	0/0:18,1:19:2.54:0,3,728	0/0:41,0:41:99:0,108,1625	0/0:4,0:4:12.04:0,12,184
chr10	36591232	.	AT	A	1449.62	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=10.716;DP=388;FS=57.602;HRun=4;HaplotypeScore=97.2180;InbreedingCoeff=0.9032;MQ=65.68;MQ0=1;MQRankSum=-11.365;QD=21.32;ReadPosRankSum=0.148;VQSLOD=-0.5492;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,6:8:20.99:219,21,0	0/0:1,0:1:3.01:0,3,43	0/0:18,0:15:36.06:0,36,473	0/0:22,0:14:25.39:0,25,306	0/0:11,0:11:24.04:0,24,309	1/1:2,11:13:32.99:372,33,0	1/1:1,4:5:5.96:69,6,0	0/0:32,0:31:90.27:0,90,1231	0/0:15,0:15:39.12:0,39,543	1/1:5,4:9:21.42:198,21,0	1/1:2,4:6:14.99:149,15,0	0/0:15,0:15:36.11:0,36,493	0/0:15,0:15:33.09:0,33,440	0/0:12,0:12:33.11:0,33,473	1/1:5,10:15:36.50:381,37,0	0/0:17,0:17:45.15:0,45,647	0/0:20,0:20:57.19:0,57,821	1/1:4,8:12:22.50:253,23,0	0/0:19,0:18:54.14:0,54,722	0/0:9,0:9:27.05:0,27,333	0/0:14,0:14:36.11:0,36,499	0/0:4,0:4:6.02:0,6,86	0/0:6,0:6:8.94:0,9,103	0/0:19,0:19:54.17:0,54,757	0/0:9,0:9:18.06:0,18,258	0/0:20,1:21:24.49:0,24,729	0/0:38,0:38:99:0,99,1402	0/0:3,0:3:9.03:0,9,129
chr10	36591250	.	A	AGG	2534.26	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=2.113;DP=385;FS=5.794;HRun=6;HaplotypeScore=100.5845;InbreedingCoeff=0.9081;MQ=73.86;MQ0=0;MQRankSum=2.110;QD=14.00;ReadPosRankSum=1.334;VQSLOD=0.2666;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:15.04:0,15,183	1/1:0,0:1:2.98:22,3,0	0/0:19,0:16:38.33:0,38,446	0/0:18,0:16:20.84:0,21,409	0/0:13,0:13:30.09:0,30,366	0/0:18,0:18:45.14:0,45,548	0/0:11,0:11:12.03:0,12,146	1/1:11,0:32:36.77:356,37,0	0/0:15,0:15:36.11:0,36,439	0/0:8,0:8:24.08:0,24,292	0/0:7,0:7:18.05:0,18,218	1/1:4,7:10:18.06:301,18,0	1/1:4,0:15:23.72:165,24,0	1/1:0,0:11:26.64:182,27,0	0/0:15,0:15:33.10:0,33,402	0/0:15,0:15:45.12:0,45,527	0/0:24,0:24:57.14:0,57,680	0/0:10,0:10:27.08:0,27,329	1/1:6,0:18:32.47:222,32,0	1/1:0,0:3:8.54:51,9,0	1/1:0,0:15:38.76:286,39,0	1/1:1,0:5:5.92:40,6,0	1/1:2,3:6:5.72:69,6,0	1/1:4,16:23:39.04:563,39,0	1/1:2,0:8:11.92:88,12,0	0/0:17,0:17:48.15:0,48,586	1/1:10,0:32:52.50:409,52,0	0/0:2,0:2:6.02:0,6,73
chr10	36592058	.	A	AGT	1263.29	PASS	AB=0.952;AC=9;AF=0.161;AN=56;BaseQRankSum=10.856;DP=642;FS=84.743;HRun=0;HaplotypeScore=147.7231;InbreedingCoeff=0.3318;MQ=52.43;MQ0=12;MQRankSum=-10.010;QD=12.76;ReadPosRankSum=-2.405;VQSLOD=0.2317;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:11,4:15:30.25:233,0,30	0/0:15,0:15:45.15:0,45,734	0/0:9,0:7:18.06:0,18,261	0/0:17,0:12:24.08:0,24,382	0/0:34,0:33:81.28:0,81,1321	0/1:19,0:18:99:132,0,113	1/1:9,0:7:11.61:158,12,0	0/0:24,0:23:69.24:0,69,1126	0/0:24,0:23:60.19:0,60,951	1/1:16,1:16:44.60:498,45,0	0/1:12,0:12:13.97:105,0,14	0/0:22,0:21:60.15:0,60,921	0/0:22,0:22:66.21:0,66,1052	0/0:21,0:21:60.14:0,60,924	0/1:15,0:15:33.29:217,0,33	0/0:28,0:27:72.72:0,73,1175	0/0:41,0:39:99:0,114,1788	0/1:11,0:10:70.20:70,0,115	0/0:30,0:23:66.23:0,66,1074	0/0:39,0:39:99:0,117,1864	0/0:24,0:22:44.20:0,44,889	0/0:32,0:32:87.28:0,87,1394	0/0:28,0:28:84.25:0,84,1338	0/0:29,0:28:75.26:0,75,1224	0/0:28,0:28:75.26:0,75,1219	0/0:34,0:34:99:0,102,1640	0/0:32,0:32:96.28:0,96,1525	0/0:10,0:10:27.04:0,27,367
chr10	36592550	.	GCACC	G	4929.80	PASS	AB=0.632;AC=12;AF=0.222;AN=54;BaseQRankSum=14.115;DP=709;FS=8.089;HRun=0;HaplotypeScore=115.4243;InbreedingCoeff=0.7517;MQ=47.73;MQ0=61;MQRankSum=-11.327;QD=34.23;ReadPosRankSum=-0.400;VQSLOD=4.1871;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:13,16:24:38.57:748,0,39	0/0:14,0:14:42.14:0,42,1091	./.	0/0:25,0:2:3.01:0,3,67	0/0:22,0:22:45.15:0,45,1217	1/1:0,16:16:42.14:799,42,0	1/1:6,12:14:18.06:359,18,0	0/0:33,0:25:75.26:0,75,2024	0/0:26,0:26:66.23:0,66,1789	1/1:3,18:19:48.15:898,48,0	1/1:1,13:14:24.08:460,24,0	0/0:23,0:23:65.88:0,66,1837	0/0:28,0:28:81.28:0,81,2237	0/0:27,0:26:66.23:0,66,1820	1/1:6,27:33:72.25:1407,72,0	0/0:44,0:44:99:0,114,3128	0/0:43,0:38:66.23:0,66,1787	0/1:5,8:9:65.91:259,0,66	0/0:26,0:20:57.20:0,57,1483	0/0:23,0:23:66.18:0,66,1726	0/0:41,0:39:45.14:0,45,1128	0/0:27,0:27:53.98:0,54,1482	0/0:21,0:21:45.05:0,45,1191	0/0:23,0:23:48.16:0,48,1343	0/0:17,0:16:28.03:0,28,752	0/0:26,1:27:21.43:0,21,2061	0/0:28,0:28:72.25:0,72,1912	0/0:23,0:20:33.11:0,33,894
chr10	36593085	.	CAGAG	C	436.01	PASS	AB=0.883;AC=17;AF=0.425;AN=40;BaseQRankSum=1.176;DP=491;FS=12.205;HRun=0;HaplotypeScore=97.4798;InbreedingCoeff=0.2232;MQ=58.45;MQ0=16;MQRankSum=-1.213;QD=2.18;ReadPosRankSum=-0.120;VQSLOD=1.2088;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:6.02:0,6,64	1/1:5,0:6:3:28,3,0	./.	./.	0/0:19,0:19:0.89:0,1,2	0/0:18,0:17:3:0,3,25	0/0:23,0:21:3.73:0,4,19	./.	1/1:15,1:15:4.41:36,4,0	0/0:17,0:14:6.02:0,6,111	./.	0/1:12,1:14:0.11:41,0,0	1/1:19,8:28:13.33:139,13,0	1/1:13,0:13:9.01:81,9,0	0/1:24,0:24:5.65:6,0,36	0/1:13,1:17:11.63:56,0,12	0/1:21,2:22:52.78:76,0,53	0/0:10,0:9:3.01:0,3,47	./.	0/1:16,0:17:0.01:0,0,0	./.	0/1:12,0:13:0:0,0,0	0/0:16,0:16:2.99:0,3,24	0/1:7,0:11:4.78:39,0,5	./.	0/0:21,0:23:7.44:0,7,46	1/1:10,0:16:6.48:57,6,0	./.
chr10	36593206	.	TG	T	7190.69	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=18.330;DP=633;FS=1.445;HRun=2;HaplotypeScore=104.2491;InbreedingCoeff=0.9570;MQ=68.78;MQ0=0;MQRankSum=-3.302;QD=39.73;ReadPosRankSum=0.650;VQSLOD=4.6782;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,34:34:99:1384,99,0	0/0:14,0:14:42.10:0,42,618	0/0:19,0:19:8.56:0,9,651	0/0:13,0:13:3.19:0,3,342	0/0:25,0:25:75.26:0,75,1195	1/1:0,23:23:60.20:839,60,0	1/1:0,29:29:78.26:1090,78,0	0/0:27,0:27:78.27:0,78,1246	0/0:14,0:14:42.14:0,42,671	1/1:0,25:25:75.24:1029,75,0	1/1:0,23:23:69.23:965,69,0	0/0:13,0:13:39.13:0,39,620	0/0:25,0:25:75.26:0,75,1196	0/0:15,0:15:45.15:0,45,719	1/1:1,25:26:78.26:1088,78,0	0/0:15,0:15:45.15:0,45,717	0/0:37,0:37:99:0,111,1770	1/1:0,21:21:57.19:797,57,0	0/0:22,0:22:62.79:0,63,1004	0/0:29,0:29:87.27:0,87,1336	0/0:17,0:17:51.17:0,51,815	0/0:23,0:23:69.24:0,69,1101	0/0:35,0:35:99:0,102,1618	0/0:17,0:17:51.17:0,51,815	0/0:24,0:24:72.25:0,72,1146	0/0:20,1:21:18.25:0,18,870	0/0:36,0:34:99:0,108,1663	0/0:11,0:11:33.11:0,33,527
chr10	36593383	.	G	GTGAAACTCA	18844.85	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=-5.079;DP=635;FS=3.065;HRun=0;HaplotypeScore=169.2519;InbreedingCoeff=0.9351;MQ=86.89;MQ0=0;MQRankSum=-17.026;QD=108.30;ReadPosRankSum=0.373;VQSLOD=5.2040;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,22:35:84.29:4013,84,0	0/0:8,0:8:24.08:0,24,777	0/0:33,0:33:96.33:0,96,2613	0/0:33,0:33:93.16:0,93,2514	0/0:21,0:21:54.19:0,54,1653	1/1:4,8:14:30.10:1393,30,0	1/1:6,11:18:48.16:2213,48,0	0/0:30,0:30:84.29:0,84,2605	0/0:15,0:15:45.15:0,45,1421	1/1:12,17:28:81.28:3651,81,0	1/1:7,10:18:51.17:2348,51,0	0/0:21,0:21:60.21:0,60,1949	0/0:22,0:22:66.21:0,66,2077	0/0:25,0:25:75.26:0,75,2445	1/1:2,25:30:84.29:4163,84,0	0/0:16,0:16:48.16:0,48,1566	0/0:25,0:25:75.26:0,75,2428	1/1:1,7:9:21.07:1061,21,0	0/0:26,0:26:78.27:0,78,2342	0/0:22,0:22:66.22:0,66,2040	0/0:26,0:26:78.27:0,78,2466	0/0:14,0:14:39.13:0,39,1256	0/0:25,0:25:69.19:0,69,2133	0/0:20,0:20:60.21:0,60,1950	0/0:25,0:25:75.25:0,75,2327	0/1:20,0:20:3.48:3,0,1637	0/0:42,0:42:99:0,126,3673	0/0:12,0:12:36.12:0,36,1161
chr10	36594047	.	TG	T	7107.59	PASS	AC=14;AF=0.259;AN=54;BaseQRankSum=16.981;DP=780;FS=7.961;HRun=1;HaplotypeScore=82.4232;InbreedingCoeff=0.9799;MQ=56.21;MQ0=25;MQRankSum=0.704;QD=38.01;ReadPosRankSum=-0.065;VQSLOD=4.9437;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,38:38:99:1510,108,0	0/0:11,0:11:33.11:0,33,528	0/0:26,0:2:6.02:0,6,96	./.	0/0:24,0:24:72.23:0,72,1121	1/1:0,11:11:27.09:377,27,0	1/1:0,23:23:66.22:923,66,0	0/0:31,0:31:90.30:0,90,1417	0/0:37,0:37:99:0,111,1744	1/1:0,26:24:72.20:984,72,0	1/1:0,27:25:72.24:1007,72,0	0/0:37,0:37:99:0,111,1744	0/0:41,0:41:99:0,123,1918	0/0:35,0:35:99:0,99,1583	1/1:0,42:41:99:1551,111,0	0/0:35,0:35:99:0,99,1583	0/0:39,0:39:99:0,117,1861	1/1:0,20:20:54.18:755,54,0	0/0:20,0:19:57.19:0,57,911	0/0:32,0:32:96.33:0,96,1527	0/0:50,0:50:99:0,150,2344	0/0:26,0:26:75.26:0,75,1197	0/0:15,0:15:45.15:0,45,719	0/0:31,0:31:93.32:0,93,1487	0/0:21,0:21:60.20:0,60,959	0/0:31,1:32:51.33:0,51,1374	0/0:24,0:24:69.13:0,69,1103	0/0:8,0:7:21.07:0,21,336
chr10	36594180	.	CAT	C	7125.87	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=14.643;DP=744;FS=4.981;HRun=0;HaplotypeScore=91.1596;InbreedingCoeff=0.9962;MQ=72.79;MQ0=3;MQRankSum=-2.442;QD=38.73;ReadPosRankSum=1.207;VQSLOD=6.9011;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,48:48:99:1851,123,0	0/0:5,0:5:15.05:0,15,290	0/0:29,0:26:78.27:0,78,1467	0/0:21,0:18:48.16:0,48,891	0/0:23,0:23:69.24:0,69,1332	1/1:0,18:17:51.17:779,51,0	1/1:1,24:23:60.20:918,60,0	0/0:34,0:33:99:0,99,1904	0/0:33,0:33:96.33:0,96,1819	1/1:0,21:21:63.21:964,63,0	1/1:0,11:9:27.09:413,27,0	0/0:35,0:35:99:0,105,2027	0/0:34,0:34:99:0,99,1874	0/0:38,0:38:99:0,111,2125	1/1:0,43:40:99:1651,108,0	0/0:30,0:30:90.31:0,90,1737	0/0:45,0:45:99:0,111,2143	1/1:0,17:17:36.10:551,36,0	0/0:22,0:21:60.21:0,60,1141	0/0:15,0:15:45.15:0,45,869	0/0:42,0:42:99:0,111,2094	0/0:25,0:25:75.26:0,75,1435	0/0:21,0:21:63.22:0,63,1216	0/0:25,0:25:72.20:0,72,1341	0/0:20,0:20:60.21:0,60,1159	0/0:30,1:31:44.36:0,44,1634	0/0:24,0:24:72.25:0,72,1385	0/0:8,0:8:21.07:0,21,405
chr10	36594922	.	AGCTCCTG	A	4692.13	PASS	AC=12;AF=0.222;AN=54;BaseQRankSum=11.289;DP=569;FS=19.110;HRun=0;HaplotypeScore=136.8092;InbreedingCoeff=0.9777;MQ=87.52;MQ0=0;MQRankSum=-11.939;QD=44.69;ReadPosRankSum=-0.315;VQSLOD=2.9534;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,15:20:42.06:913,42,0	0/0:16,0:16:42.12:0,42,1469	0/0:17,0:17:45.14:0,45,1487	0/0:34,0:34:90.08:0,90,3141	0/0:26,0:26:72.25:0,72,2793	1/1:1,19:18:48.12:1123,48,0	1/1:2,11:12:24.04:552,24,0	0/0:39,0:38:99:0,108,3976	0/0:21,0:20:54.17:0,54,2028	1/1:4,18:19:36.11:834,36,0	1/1:4,6:6:6.02:152,6,0	0/0:19,0:18:45.15:0,45,1758	0/0:12,0:12:33.11:0,33,1284	0/0:14,0:14:33.11:0,33,1191	1/1:4,16:20:48.12:1118,48,0	0/0:14,0:14:42.14:0,42,1653	0/0:18,0:18:48.16:0,48,1763	./.	0/0:19,0:19:54.19:0,54,1975	0/0:30,0:30:87.30:0,87,3427	0/0:31,0:31:87.28:0,87,3312	0/0:17,0:17:48.14:0,48,1657	0/0:20,0:20:57.20:0,57,2198	0/0:27,0:27:75.15:0,75,2931	0/0:16,0:16:45.15:0,45,1685	0/0:26,0:26:63.22:0,63,2395	0/0:25,0:25:75.26:0,75,2904	0/0:20,0:20:60.21:0,60,2005
chr10	36594997	.	GACACACACACACACACAC	G	1876.40	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=5.059;DP=427;FS=3.314;HRun=0;HaplotypeScore=184.1385;InbreedingCoeff=0.8048;MQ=53.35;MQ0=12;MQRankSum=-6.607;QD=22.08;ReadPosRankSum=-0.318;VQSLOD=2.3461;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:13,3:15:18.02:374,18,0	0/0:10,0:11:12.04:0,12,596	0/0:31,0:13:6.02:0,6,134	0/0:35,0:19:19.85:0,20,557	0/0:14,0:13:12.04:0,12,478	1/1:12,7:18:21.06:380,21,0	1/1:10,1:10:3.01:147,3,0	0/0:20,0:20:27.09:0,27,1455	0/0:20,0:19:24.96:0,25,1368	1/1:4,4:6:12.04:579,12,0	1/1:7,4:7:3.01:39,3,0	0/0:19,0:20:21.07:0,21,1600	0/0:10,0:10:27.08:0,27,1771	0/0:9,0:10:21.07:0,21,1323	1/1:7,4:11:11.80:92,12,0	0/0:10,0:8:3.01:0,3,72	0/0:16,0:16:15.03:0,15,661	1/1:3,4:7:9.03:442,9,0	0/0:9,0:10:21.07:0,21,846	0/0:15,0:15:27.09:0,27,1961	0/0:19,0:18:9.02:0,9,366	0/0:7,0:9:9.03:0,9,495	0/0:11,0:12:12.04:0,12,855	0/0:22,0:25:15.99:0,16,1004	0/0:14,0:15:39.13:0,39,2681	0/0:18,0:16:27.09:0,27,1790	0/0:9,0:10:12.04:0,12,877	0/0:9,0:5:12.04:0,12,689
chr10	36595038	.	A	AC	390.84	PASS	AB=0.843;AC=7;AF=0.125;AN=56;BaseQRankSum=4.311;DP=507;FS=11.200;HRun=0;HaplotypeScore=109.0253;InbreedingCoeff=0.0858;MQ=34.71;MQ0=72;MQRankSum=-1.251;QD=5.28;ReadPosRankSum=-0.843;VQSLOD=2.7750;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:13:7.82:0,8,79	0/0:14,0:14:17.75:0,18,214	0/0:47,0:1:3.01:0,3,42	0/0:73,0:2:2.94:0,3,40	1/1:10,1:6:3.01:45,3,0	0/0:22,0:20:20.53:0,21,194	0/0:9,0:8:7.99:0,8,44	0/0:26,0:24:69.19:0,69,962	0/1:11,5:15:57.45:226,0,57	0/0:16,0:15:34.61:0,35,440	0/1:7,0:4:0:0,0,0	0/0:18,0:17:20.49:0,20,176	0/0:19,0:18:16.21:0,16,256	0/0:10,0:9:12.03:0,12,153	0/0:12,0:11:2.88:0,3,41	0/0:12,2:14:2.95:0,3,42	0/1:10,3:13:99:101,0,103	0/0:10,0:9:18.39:0,18,202	0/0:11,0:10:17.89:0,18,303	0/0:15,0:14:20.94:0,21,257	0/0:16,0:8:5.97:0,6,63	0/0:10,0:10:8.73:0,9,69	0/0:14,0:7:6:0,6,63	0/0:21,0:20:8.98:0,9,86	0/0:20,0:20:24.04:0,24,289	0/1:17,1:15:3.09:3,0,443	0/0:19,0:19:22.73:0,23,263	0/1:5,4:5:26.33:127,0,26
chr10	36595040	.	CAGAGAGAG	C	478.78	PASS	AB=0.887;AC=19;AF=0.396;AN=48;BaseQRankSum=3.068;DP=514;FS=15.513;HRun=0;HaplotypeScore=127.5485;InbreedingCoeff=0.3322;MQ=34.59;MQ0=72;MQRankSum=-2.218;QD=2.63;ReadPosRankSum=-0.241;VQSLOD=1.7316;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:17,0:13:0.09:0,0,0	1/1:13,0:14:4.46:20,4,0	./.	./.	0/1:7,0:6:0:0,0,0	0/0:26,0:24:7.64:0,8,284	1/1:8,0:8:0.62:2,1,0	./.	0/0:13,0:14:0.47:0,0,1	0/0:15,0:16:24.08:0,24,641	0/0:7,0:4:0:0,0,0	1/1:13,3:16:2.87:74,3,0	1/1:14,1:18:14.63:151,15,0	0/0:12,0:12:0.89:0,1,2	0/0:13,0:12:3.01:0,3,123	0/0:11,0:14:2.65:0,3,14	1/1:10,0:13:2.98:56,3,0	0/0:10,0:9:12.02:0,12,356	0/1:13,0:11:35.18:60,0,35	0/0:15,0:14:3.01:0,3,38	0/0:17,0:9:0:0,0,0	0/0:10,0:10:3.01:0,3,32	0/1:13,1:7:0:0,0,0	1/1:13,6:18:2.69:54,3,0	0/0:17,2:20:5.59:0,6,35	1/1:14,0:14:6.02:112,6,0	0/1:14,2:19:16.30:75,0,16	./.
chr10	36596870	.	T	TACACAGCTTC	81344.34	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-2.772;DP=726;FS=1.382;HRun=0;HaplotypeScore=195.8924;InbreedingCoeff=0.8461;MQ=43.52;MQ0=0;MQRankSum=-4.864;QD=114.57;ReadPosRankSum=3.380;VQSLOD=5.3042;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,9:22:51.18:2256,51,0	1/1:5,5:10:30.10:1399,30,0	0/0:10,0:10:11.06:0,11,413	0/0:6,0:5:2.74:0,3,12	1/1:7,23:33:75.26:3498,75,0	1/1:16,24:41:99:4944,114,0	1/1:14,9:24:63.21:2591,63,0	1/1:29,15:44:99:5170,123,0	1/1:9,17:29:69.24:3204,69,0	1/1:19,23:43:99:6095,126,0	1/1:8,12:21:57.19:2460,57,0	1/1:6,16:25:60.20:2815,60,0	1/1:15,20:41:99:4603,108,0	1/1:5,14:21:51.18:2443,51,0	1/1:6,17:24:66.23:3098,66,0	1/1:13,14:29:72.24:3056,72,0	1/1:7,7:14:27.09:1318,27,0	1/1:5,3:9:9.03:476,9,0	1/1:9,11:21:63.19:2834,63,0	1/1:15,16:36:90.31:3618,90,0	1/1:4,8:12:30.10:1339,30,0	1/1:8,12:23:60.21:2563,60,0	1/1:9,23:35:84.29:4102,84,0	1/1:7,7:16:27.09:1302,27,0	1/1:11,22:36:96.20:4177,96,0	1/1:9,15:27:75.24:3529,75,0	1/1:17,31:50:99:6234,132,0	1/1:3,13:17:45.15:2222,45,0
chr10	36597425	.	TA	T	4107.60	PASS	AB=0.912;AC=15;AF=0.268;AN=56;BaseQRankSum=16.867;DP=669;FS=3.181;HRun=5;HaplotypeScore=91.8687;InbreedingCoeff=0.9114;MQ=57.07;MQ0=5;MQRankSum=-5.953;QD=21.28;ReadPosRankSum=2.220;VQSLOD=2.7682;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,15:15:30.02:316,30,0	0/0:9,0:9:27.09:0,27,369	0/0:21,0:6:18.06:0,18,239	0/0:23,0:7:18.05:0,18,220	0/0:38,0:38:99:0,108,1477	1/1:1,28:27:72.19:807,72,0	1/1:2,18:16:36.03:391,36,0	0/0:39,0:39:99:0,117,1538	0/0:30,0:30:84.25:0,84,1114	1/1:2,20:20:54.15:611,54,0	1/1:2,15:17:45.08:496,45,0	0/0:24,0:24:69.22:0,69,927	0/0:24,0:24:69.22:0,69,929	0/0:26,0:26:72.23:0,72,970	1/1:3,32:35:84.14:910,84,0	0/0:17,0:17:51.17:0,51,698	0/0:21,0:21:60.20:0,60,820	1/1:2,19:21:51.10:564,51,0	0/0:15,0:15:42.14:0,42,575	0/0:22,0:22:54.15:0,54,706	0/0:19,0:19:51.15:0,51,679	0/0:25,0:25:72.23:0,72,970	0/0:24,0:24:66.22:0,66,903	0/0:26,0:26:75.24:0,75,1009	0/0:28,0:28:81.23:0,81,1087	0/1:28,3:30:11.79:12,0,991	0/0:30,0:30:75.24:0,75,1010	0/0:14,0:14:36.12:0,36,492
chr10	36602242	.	CT	C	5756.04	PASS	AB=0.523;AC=11;AF=0.196;AN=56;BaseQRankSum=15.325;DP=720;FS=1.960;HRun=1;HaplotypeScore=77.5989;InbreedingCoeff=0.8792;MQ=68.38;MQ0=0;MQRankSum=-0.757;QD=38.89;ReadPosRankSum=3.299;VQSLOD=5.6062;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,111,1701	0/0:4,0:4:12.04:0,12,190	0/0:20,1:22:42.56:0,43,766	0/0:10,0:10:21.06:0,21,300	1/1:0,27:27:78.26:1088,78,0	0/0:26,0:26:78.25:0,78,1223	0/0:29,0:29:87.28:0,87,1359	0/0:33,0:33:99:0,99,1542	1/1:0,31:31:87.29:1214,87,0	0/0:31,0:31:93.31:0,93,1450	0/0:23,0:23:66.22:0,66,1050	0/0:24,0:24:72.24:0,72,1134	0/0:32,0:32:93.30:0,93,1464	0/0:24,0:24:72.25:0,72,1151	0/0:33,0:33:99:0,99,1557	1/1:0,27:27:75.25:1049,75,0	1/1:0,33:33:93.31:1300,93,0	0/0:12,0:12:36.12:0,36,575	0/0:22,0:21:63.21:0,63,985	0/0:31,0:31:90.31:0,90,1424	0/0:41,0:41:99:0,123,1931	0/0:27,0:27:81.28:0,81,1295	0/0:22,0:22:66.21:0,66,1030	0/0:25,0:25:75.26:0,75,1199	0/0:26,0:26:78.27:0,78,1247	0/1:2,21:23:26.75:811,0,27	0/0:37,0:35:99:0,111,1761	1/1:0,7:7:21.07:294,21,0
chr10	36603401	.	CAAAAAAAA	C	5392.08	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=6.609;DP=504;FS=0.472;HRun=18;HaplotypeScore=127.1531;InbreedingCoeff=0.9259;MQ=67.23;MQ0=6;MQRankSum=-10.214;QD=43.14;ReadPosRankSum=7.863;VQSLOD=2.6327;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,14:18:32.89:709,33,0	0/0:3,0:9:18.06:0,18,697	0/0:39,0:18:33.10:0,33,719	0/0:31,0:16:15.52:0,16,304	0/0:17,0:24:51.18:0,51,1872	1/1:3,18:21:51.07:1102,51,0	1/1:4,5:9:11.85:261,12,0	0/0:25,0:40:81.38:0,81,2912	0/0:22,0:21:33.11:0,33,1306	1/1:7,13:20:38.77:847,39,0	1/1:3,17:21:49.84:988,50,0	0/0:15,0:15:36.12:0,36,1247	0/0:14,0:14:24.08:0,24,885	0/0:13,0:16:48.16:0,48,1737	1/1:5,14:20:38.83:831,39,0	0/0:6,0:11:6.02:0,6,243	0/0:15,0:15:24.08:0,24,800	1/1:4,12:16:29.90:654,30,0	0/0:11,0:11:24.07:0,24,738	0/0:7,0:19:42.14:0,42,1472	0/0:3,0:7:9.03:0,9,351	0/0:8,0:10:12.04:0,12,474	0/0:13,0:24:45.63:0,46,1615	0/0:4,0:11:9.03:0,9,351	0/0:7,0:17:27.09:0,27,998	0/0:24,0:23:48.15:0,48,1767	0/0:12,0:14:33.11:0,33,1259	0/0:3,0:3:6.02:0,6,238
chr10	36603791	.	G	GA	1809.81	PASS	AB=1.000;AC=20;AF=0.357;AN=56;BaseQRankSum=-12.189;DP=610;FS=1.336;HRun=7;HaplotypeScore=113.4634;InbreedingCoeff=-0.0719;MQ=71.43;MQ0=0;MQRankSum=3.607;QD=5.11;ReadPosRankSum=-4.527;VQSLOD=-0.4378;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:56:19.87:0,20,247	0/0:8,0:8:13.48:0,13,40	0/1:9,0:9:0.27:0,0,18	0/0:7,0:7:4.83:0,5,23	0/1:28,0:28:27.69:28,0,97	0/1:21,0:21:8.82:9,0,83	0/0:22,0:22:38.02:0,38,118	0/1:34,0:34:8.33:8,0,66	0/1:20,0:20:33.31:33,0,62	0/0:23,0:23:34.64:0,35,140	0/0:19,0:19:12.24:0,12,79	1/1:2,22:24:57.13:666,57,0	0/0:18,0:18:33.82:0,34,103	0/1:20,0:20:11.55:12,0,63	0/1:27,0:27:3.77:4,0,83	0/1:20,0:20:36.29:36,0,63	0/0:36,0:36:24.50:0,25,161	0/1:15,0:15:13.87:14,0,56	0/1:21,0:21:41.76:88,0,42	0/1:31,0:31:18.16:18,0,129	0/0:24,0:24:25.62:0,26,121	0/0:14,0:14:0.76:0,1,41	1/1:4,20:24:54.12:630,54,0	1/1:1,10:11:27.08:323,27,0	0/1:21,0:21:39.42:39,0,54	0/1:20,0:20:35.17:46,0,35	0/0:29,0:29:13.28:0,13,141	0/1:8,0:8:19.78:25,0,20
chr10	36604910	.	G	GTC	5919.19	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-3.171;DP=708;FS=0.000;HRun=0;HaplotypeScore=98.7651;InbreedingCoeff=0.9693;MQ=77.99;MQ0=0;MQRankSum=0.050;QD=30.51;ReadPosRankSum=0.984;VQSLOD=6.7038;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,20:28:44.99:736,45,0	0/0:10,0:10:24.07:0,24,292	0/0:38,0:30:3.48:0,3,348	0/0:27,0:27:24.55:0,25,356	0/0:35,0:35:90.28:0,90,1114	1/1:6,15:21:36.12:577,36,0	1/1:3,15:18:32.93:535,33,0	0/0:42,0:43:90.09:0,90,1068	0/0:20,0:20:54.17:0,54,668	1/1:6,33:39:62.13:1499,62,0	1/1:6,25:31:23.46:881,23,0	0/0:20,0:20:48.15:0,48,594	0/0:25,0:25:66.19:0,66,805	0/0:17,0:17:39.12:0,39,483	1/1:8,21:29:51.17:836,51,0	0/0:22,0:22:57.17:0,57,693	0/0:20,0:20:54.17:0,54,669	1/1:8,19:27:26.65:854,27,0	0/0:12,0:12:30.09:0,30,361	0/0:37,0:37:96.29:0,96,1175	0/0:19,0:19:51.16:0,51,632	0/0:26,0:26:69.22:0,69,855	0/0:24,0:24:63.09:0,63,758	0/0:17,0:17:48.15:0,48,594	0/0:26,0:26:75.24:0,75,929	0/0:37,0:37:93.29:0,93,1153	0/0:29,0:29:69.21:0,69,854	0/0:10,0:10:30.03:0,30,316
chr10	36605451	.	G	GTTT	4357.66	PASS	AB=0.661;AC=11;AF=0.196;AN=56;BaseQRankSum=-2.755;DP=787;FS=9.249;HRun=10;HaplotypeScore=179.0000;InbreedingCoeff=0.8974;MQ=73.19;MQ0=5;MQRankSum=-3.821;QD=29.64;ReadPosRankSum=-5.607;VQSLOD=0.5694;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,112,966	0/0:13,0:13:30.05:0,30,364	0/0:49,0:29:29.50:0,30,411	0/0:37,0:25:22.03:0,22,178	1/1:12,7:20:47.07:694,47,0	0/0:25,0:25:56.86:0,57,555	0/0:38,0:38:88.87:0,89,831	0/0:32,0:33:57.42:0,57,871	1/1:15,7:22:45.13:739,45,0	0/0:32,0:32:77.14:0,77,707	0/0:20,0:20:48.56:0,49,422	0/0:35,0:35:65.95:0,66,789	0/0:25,0:25:51.09:0,51,602	0/0:22,0:22:45.02:0,45,534	0/0:31,0:31:67.03:0,67,618	1/1:20,11:31:63.06:967,63,0	1/1:14,11:26:45.05:695,45,0	0/0:18,0:18:44.28:0,44,358	0/0:24,0:24:55.07:0,55,603	0/0:33,0:33:84.16:0,84,1021	0/0:20,0:20:48.11:0,48,571	0/0:28,0:28:63.13:0,63,765	0/0:25,0:26:44.86:0,45,546	0/0:24,0:24:60.07:0,60,714	0/0:32,0:33:90.15:0,90,1051	0/1:18,15:36:8.41:1048,0,8	0/0:23,0:24:60.04:0,60,711	1/1:7,2:10:14.99:216,15,0
chr10	36605461	.	T	TA	5056.77	PASS	AB=1.000;AC=16;AF=0.286;AN=56;BaseQRankSum=-4.992;DP=764;FS=53.818;HRun=2;HaplotypeScore=136.9368;InbreedingCoeff=0.7948;MQ=74.71;MQ0=5;MQRankSum=0.200;QD=17.62;ReadPosRankSum=1.604;VQSLOD=1.3426;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:42,1:43:99:1078,125,0	0/0:11,0:11:33.09:0,33,389	0/0:53,0:31:52.66:0,53,548	0/1:39,0:26:24.72:25,0,122	0/0:17,0:18:4.70:0,5,130	1/1:27,0:27:77.43:601,77,0	1/1:36,1:37:99:885,104,0	0/0:32,0:32:87.01:0,87,938	0/0:21,0:20:20:0,20,90	1/1:32,0:32:80.49:739,80,0	1/1:22,1:23:64.58:570,65,0	0/0:32,0:32:84.14:0,84,924	0/0:24,0:24:57.02:0,57,617	0/0:22,0:22:51.10:0,51,569	1/1:29,1:30:59.98:681,60,0	0/0:28,0:28:11.20:0,11,99	0/0:19,0:19:32.14:0,32,138	1/1:15,0:15:41.56:385,42,0	0/0:21,0:21:51.12:0,51,576	0/0:33,0:33:96.06:0,96,1088	0/0:20,0:20:48.11:0,48,546	0/0:25,0:25:74.94:0,75,815	0/0:26,0:26:63.08:0,63,673	0/0:26,0:26:69.15:0,69,788	0/0:33,0:33:93.18:0,93,1084	0/1:38,0:37:94.11:94,0,193	0/0:26,0:26:72.01:0,72,793	0/0:7,0:7:13.11:0,13,58
chr10	36605466	.	TG	T	6773.62	PASS	AB=1.000;AC=36;AF=0.643;AN=56;BaseQRankSum=-0.040;DP=757;FS=0.735;HRun=9;HaplotypeScore=128.4423;InbreedingCoeff=0.8347;MQ=74.66;MQ0=5;MQRankSum=2.277;QD=12.90;ReadPosRankSum=4.039;VQSLOD=3.8695;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:41,0:41:54.64:302,55,0	1/1:2,9:11:27.01:247,27,0	0/0:53,0:31:41.56:0,42,491	0/1:43,0:28:25.36:25,0,122	0/0:13,0:19:17.91:0,18,107	1/1:27,0:27:65.71:321,66,0	1/1:36,0:36:75.44:390,75,0	1/1:7,23:30:51.10:600,51,0	0/0:9,0:19:26.09:0,26,179	1/1:26,0:26:63.38:360,63,0	1/1:23,0:23:41.74:265,42,0	0/0:33,1:34:56.74:0,57,865	1/1:7,18:25:39.02:357,39,0	1/1:2,20:22:45.02:412,45,0	1/1:26,0:26:58.49:309,58,0	0/0:8,0:30:43.02:0,43,230	0/0:11,0:19:16.24:0,16,78	1/1:15,0:15:26.26:123,26,0	1/1:2,15:18:47.05:415,47,0	1/1:11,24:35:68.94:618,69,0	1/1:6,14:20:36.02:329,36,0	1/1:6,20:27:55.97:483,56,0	0/0:23,1:24:20.65:0,21,477	0/0:26,0:26:72.19:0,72,811	1/1:5,29:34:81.04:741,81,0	0/1:24,0:37:38.41:38,0,179	1/1:9,18:27:48.01:439,48,0	0/0:2,0:7:11.36:0,11,58
chr10	36606624	.	CAG	C	32.99	PASS	AB=0.971;AC=5;AF=0.104;AN=48;BaseQRankSum=0.319;DP=549;FS=4.361;HRun=0;HaplotypeScore=154.7212;InbreedingCoeff=0.2664;MQ=37.02;MQ0=46;MQRankSum=0.345;QD=0.34;ReadPosRankSum=-1.580;VQSLOD=1.8619;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,5:17:14.58:0,15,188	0/0:9,0:9:4.80:0,5,27	./.	0/0:28,2:4:3.01:0,3,49	./.	0/0:18,4:18:22.21:0,22,326	0/0:19,4:15:18:0,18,182	0/0:23,0:21:29.77:0,30,346	0/0:15,0:15:5.97:0,6,55	0/0:21,5:17:8.94:0,9,327	0/0:13,1:13:14.92:0,15,137	0/0:20,1:20:8.97:0,9,74	0/0:23,0:22:31.34:0,31,322	0/0:18,0:17:2.97:0,3,32	0/1:19,2:20:0.06:0,0,91	0/0:25,0:25:4.31:0,4,21	0/0:9,0:8:6.91:0,7,53	0/0:13,0:10:22.74:0,23,272	0/0:9,0:8:17.06:0,17,273	0/1:29,0:26:0:0,0,0	0/0:31,0:24:6.02:0,6,111	./.	0/1:20,0:19:26.95:43,0,27	1/1:27,0:24:11.91:86,12,0	./.	0/0:19,0:17:46.78:0,47,422	0/0:25,0:25:7.83:0,8,90	0/0:9,0:8:5.94:0,6,41
chr10	36606630	.	CAGACACAGACACAGACACAG	C	2063.36	PASS	AB=1.000;AC=22;AF=0.500;AN=44;BaseQRankSum=-1.495;DP=554;FS=2.336;HRun=0;HaplotypeScore=201.3091;InbreedingCoeff=0.0602;MQ=35.05;MQ0=49;MQRankSum=0.308;QD=6.72;ReadPosRankSum=-3.164;VQSLOD=2.2852;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:18:62.98:63,0,118	1/1:6,2:8:5.34:18,5,0	./.	0/0:31,0:3:4.60:0,5,27	0/1:20,0:19:0:0,0,0	0/1:25,0:21:76.74:77,0,167	0/1:26,0:17:17.46:19,0,17	1/1:23,0:21:59.25:634,59,0	0/0:15,0:15:4.45:0,4,37	0/1:26,0:17:37.79:38,0,545	0/1:13,0:12:28.73:29,0,114	0/0:21,0:20:9:0,9,83	1/1:18,3:20:23.70:567,24,0	./.	1/1:22,0:21:5.82:37,6,0	0/0:25,0:25:4.98:0,5,24	0/0:11,0:10:12.67:0,13,138	0/1:14,0:11:23.90:24,0,593	1/1:8,1:8:12.32:310,12,0	./.	0/0:9,21:23:6.02:0,6,231	./.	./.	0/1:23,0:20:0:0,0,0	./.	0/1:20,0:18:44.08:44,0,391	1/1:4,20:24:11.21:277,11,0	0/1:8,0:7:52.78:71,0,53
chr10	36606636	.	CAGACACAGACACAG	C	1625.12	PASS	AB=0.991;AC=22;AF=0.500;AN=44;BaseQRankSum=-0.576;DP=555;FS=3.545;HRun=0;HaplotypeScore=178.5995;InbreedingCoeff=0.1067;MQ=33.93;MQ0=51;MQRankSum=0.249;QD=5.31;ReadPosRankSum=-3.480;VQSLOD=1.9712;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:17:45.44:45,0,54	1/1:8,0:8:5.01:18,5,0	./.	0/0:34,0:3:5.01:0,5,27	0/1:22,0:21:0.02:0,0,0	0/1:24,0:20:57.54:58,0,88	1/1:27,0:18:11.51:98,12,0	1/1:25,0:22:62.85:713,63,0	0/0:16,0:16:5.79:0,6,53	0/1:27,0:18:99:122,0,252	0/1:13,0:12:14.75:15,0,34	1/1:5,15:19:3.01:37,3,0	0/1:21,0:21:8.06:232,0,8	./.	1/1:20,0:19:6.18:36,6,0	0/0:21,0:21:1.55:0,2,4	0/0:11,0:10:12.62:0,13,130	0/1:12,0:9:2.91:3,0,383	0/1:10,0:9:4.21:207,0,4	./.	0/0:31,0:24:6.02:0,6,147	./.	./.	0/1:20,1:18:0:0,0,0	./.	0/0:20,0:18:40.62:0,41,443	1/1:23,0:23:11.21:158,11,0	0/1:8,0:7:21.61:22,0,53
chr10	36606648	.	CAG	C	1131.12	PASS	AB=0.933;AC=22;AF=0.550;AN=40;BaseQRankSum=1.125;DP=553;FS=1.982;HRun=0;HaplotypeScore=137.3930;InbreedingCoeff=0.3970;MQ=33.15;MQ0=58;MQRankSum=-1.993;QD=4.69;ReadPosRankSum=-2.086;VQSLOD=2.9655;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:15:5.58:33,6,0	1/1:5,2:7:5.38:21,5,0	./.	0/0:39,0:3:5.02:0,5,28	0/1:24,0:23:0.01:0,0,0	0/1:20,0:16:0.03:0,0,0	0/0:21,0:12:0:0,0,0	1/1:5,22:24:62.98:737,63,0	0/0:17,0:17:3.01:0,3,34	1/1:25,0:17:26.73:154,27,0	1/1:13,0:12:3.88:26,4,0	./.	0/1:12,7:18:19.73:61,0,20	./.	1/1:21,0:20:3.78:15,4,0	1/1:22,0:22:0.88:4,1,0	0/0:14,0:12:9.27:0,9,57	0/0:13,0:10:0.19:0,0,13	1/1:5,4:7:12.13:138,12,0	./.	0/0:29,0:23:2.97:0,3,20	./.	./.	./.	./.	0/0:25,0:22:38.25:0,38,436	1/1:23,0:23:10.80:61,11,0	0/1:9,0:8:10.73:11,0,70
chr10	36606656	.	CAGAGAGAGAGAGAGAGAGAGAG	C	2926.99	PASS	AB=0.864;AC=21;AF=0.500;AN=42;BaseQRankSum=2.760;DP=540;FS=25.968;HRun=0;HaplotypeScore=172.6711;InbreedingCoeff=0.3194;MQ=33.81;MQ0=51;MQRankSum=0.517;QD=12.84;ReadPosRankSum=2.738;VQSLOD=0.8005;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:19:6.02:0,6,149	1/1:5,0:8:5.22:275,5,0	./.	0/0:39,0:3:0:0,0,0	0/1:15,13:27:0:0,0,0	0/0:19,0:15:0.89:0,1,2	0/0:20,0:10:0.47:0,0,1	0/0:26,0:26:0.42:0,0,1	1/1:8,9:17:2.63:90,3,0	0/1:25,0:17:31.97:32,0,562	0/0:12,0:11:3.01:0,3,64	./.	1/1:13,0:16:3.01:118,3,0	1/1:14,0:15:3.01:101,3,0	0/0:19,0:18:0.89:0,1,2	1/1:18,4:22:3.01:135,3,0	1/1:11,4:13:2.26:249,2,0	0/0:13,0:10:5.97:0,6,86	1/1:9,0:9:1.52:143,2,0	./.	./.	./.	./.	0/1:18,0:16:0:0,0,0	./.	1/1:14,12:23:36.11:1606,36,0	1/1:20,0:23:6.02:288,6,0	0/0:8,0:7:2.84:0,3,9
chr10	36608190	.	T	TAGGAA	11819.62	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-10.175;DP=778;FS=0.344;HRun=0;HaplotypeScore=135.8966;InbreedingCoeff=0.9990;MQ=62.75;MQ0=4;MQRankSum=-8.403;QD=57.94;ReadPosRankSum=1.554;VQSLOD=5.0463;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,20:20:48.16:1371,48,0	0/0:7,0:7:21.07:0,21,456	0/0:39,0:38:99:0,108,2154	0/0:20,0:19:51.17:0,51,1073	0/0:24,0:24:60.21:0,60,1291	1/1:5,27:28:69.24:2074,69,0	1/1:8,21:27:54.06:1256,54,0	0/0:29,0:29:81.28:0,81,1722	0/0:34,0:34:99:0,102,2146	1/1:3,27:27:78.27:2339,78,0	1/1:5,11:17:33.07:678,33,0	0/0:31,0:31:90.29:0,90,1884	0/0:34,0:34:99:0,99,2065	0/0:33,0:33:90.31:0,90,1932	1/1:10,34:40:96.33:2771,96,0	0/0:23,0:23:69.24:0,69,1493	0/0:32,0:32:96.33:0,96,2085	1/1:2,14:14:42.14:1332,42,0	0/0:22,0:22:60.18:0,60,1234	0/0:31,0:30:84.26:0,84,1720	0/0:41,0:41:99:0,120,2577	0/0:30,0:30:78.24:0,78,1591	0/0:20,0:20:54.17:0,54,1131	0/0:34,0:34:93.32:0,93,2019	0/0:20,0:20:57.19:0,57,1152	0/0:28,0:28:78.25:0,78,1632	0/0:33,0:33:99:0,99,2034	0/0:9,0:9:27.09:0,27,586
chr10	36608568	.	A	AACAC	9201.34	PASS	AB=0.924;AC=40;AF=0.714;AN=56;BaseQRankSum=-6.665;DP=753;FS=1.697;HRun=0;HaplotypeScore=213.2114;InbreedingCoeff=0.5759;MQ=63.16;MQ0=3;MQRankSum=2.853;QD=15.84;ReadPosRankSum=0.421;VQSLOD=4.5680;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:17,0:23:33.11:33,0,88	1/1:4,0:16:15.05:266,15,0	0/0:44,0:34:21.89:0,22,242	0/0:51,0:37:44.84:0,45,653	1/1:7,19:26:44.89:846,45,0	0/0:16,0:24:24.04:0,24,245	0/1:17,0:28:28.19:28,0,207	1/1:17,0:16:15.05:290,15,0	1/1:7,23:32:62.55:1315,63,0	0/0:18,0:25:38.91:0,39,360	0/0:6,0:10:5.39:0,5,23	1/1:20,0:23:37.90:614,38,0	1/1:16,0:30:28.19:519,28,0	1/1:16,1:32:17.14:312,17,0	0/1:18,0:28:10.92:11,0,268	1/1:6,18:26:41.88:953,42,0	1/1:5,12:20:24.08:551,24,0	0/0:12,0:17:11.51:0,12,97	0/1:9,0:16:30.50:289,0,31	1/1:9,0:28:7.64:109,8,0	1/1:25,0:29:8.66:78,9,0	1/1:16,0:27:0.20:1,0,0	1/1:12,3:37:24.43:364,24,0	1/1:17,3:35:15.52:342,16,0	1/1:12,1:25:9.36:158,9,0	1/1:10,15:31:32.55:1071,33,0	1/1:12,0:31:35.33:591,35,0	1/1:2,10:11:21.04:459,21,0
chr10	36608604	.	G	GAGAGAC	6735.50	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-2.689;DP=800;FS=7.951;HRun=0;HaplotypeScore=252.3756;InbreedingCoeff=0.9879;MQ=49.53;MQ0=18;MQRankSum=-6.698;QD=35.83;ReadPosRankSum=-1.057;VQSLOD=3.2569;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:21,10:33:39.13:1007,39,0	0/0:11,0:11:26.41:0,26,320	0/0:54,0:20:14.84:0,15,286	0/0:66,0:35:41.84:0,42,669	0/0:25,0:24:48.13:0,48,877	1/1:21,2:23:33.08:644,33,0	1/1:21,10:30:54.17:1398,54,0	0/0:31,0:28:46.34:0,46,688	0/0:27,0:27:66.17:0,66,1150	1/1:13,17:31:69.11:1606,69,0	1/1:11,2:13:15.04:355,15,0	0/0:26,0:26:62.17:0,62,1082	0/0:32,0:30:44.65:0,45,686	0/0:35,0:35:65.97:0,66,1147	1/1:26,4:32:57.19:1254,57,0	0/0:32,0:32:72.14:0,72,1242	0/0:19,0:19:27.08:0,27,527	1/1:8,9:20:18.06:471,18,0	0/0:21,0:21:35.56:0,36,485	0/0:23,0:21:17.57:0,18,287	0/0:27,0:27:38.48:0,38,726	0/0:24,0:22:33.57:0,34,644	0/0:35,0:35:34.02:0,34,498	0/0:32,0:32:47.37:0,47,801	0/0:32,0:29:31.59:0,32,847	0/0:22,0:22:39.12:0,39,721	0/0:27,0:27:20.04:0,20,592	0/0:11,0:11:17.91:0,18,198
chr10	36610627	.	TC	T	5021.99	PASS	AC=12;AF=0.222;AN=54;BaseQRankSum=13.821;DP=679;FS=5.114;HRun=1;HaplotypeScore=60.6079;InbreedingCoeff=0.9776;MQ=55.36;MQ0=14;MQRankSum=2.610;QD=37.76;ReadPosRankSum=4.443;VQSLOD=5.2966;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:48.15:0,48,739	0/0:10,0:10:30.10:0,30,480	./.	0/0:21,0:2:6.02:0,6,96	1/1:0,28:28:78.22:1069,78,0	0/0:33,0:33:93.32:0,93,1486	0/0:28,0:28:81.26:0,81,1270	0/0:44,0:43:99:0,126,1909	1/1:0,19:19:57.19:797,57,0	0/0:41,0:39:99:0,117,1869	0/0:25,0:24:69.24:0,69,1102	0/0:16,0:16:48.11:0,48,693	0/0:22,0:22:66.20:0,66,1029	0/0:20,0:20:60.20:0,60,959	0/0:36,0:36:99:0,108,1699	1/1:0,32:32:87.29:1217,87,0	1/1:1,12:13:21.07:294,21,0	0/0:24,0:22:42.14:0,42,651	0/0:18,0:16:48.15:0,48,741	0/0:29,0:29:87.30:0,87,1386	0/0:11,0:11:27.09:0,27,429	0/0:29,0:29:81.20:0,81,1294	0/0:23,0:23:69.18:0,69,1030	0/0:16,0:16:48.14:0,48,736	0/0:25,0:25:72.25:0,72,1151	1/1:0,30:30:90.28:1226,90,0	0/0:28,0:28:84.27:0,84,1314	1/1:0,11:11:30.10:419,30,0
chr10	36610959	.	CCTT	C	5918.36	PASS	AB=0.646;AC=7;AF=0.125;AN=56;BaseQRankSum=1.524;DP=1134;FS=23.196;HRun=0;HaplotypeScore=224.4870;InbreedingCoeff=-0.1429;MQ=67.00;MQ0=0;MQRankSum=-2.291;QD=21.37;ReadPosRankSum=1.252;VQSLOD=3.2989;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:22,28:50:99:995,0,960	0/0:14,0:13:39.13:0,39,863	0/0:31,0:30:87.13:0,87,1884	0/0:36,0:36:99:0,102,2204	0/0:60,0:55:99:0,129,2701	0/1:16,24:39:99:924,0,608	0/1:12,20:31:99:833,0,550	0/0:74,0:67:99:0,175,3786	0/0:26,0:26:66.16:0,66,1465	0/1:14,32:44:99:1397,0,370	0/1:17,26:39:99:849,0,370	0/0:38,0:38:99:0,102,2290	0/0:47,0:47:99:0,132,2869	0/0:28,0:28:72.25:0,72,1645	0/1:26,15:41:99:518,0,995	0/0:50,0:50:99:0,135,2982	0/0:40,0:40:96.31:0,96,2148	0/1:14,11:25:99:403,0,572	0/0:31,0:29:68.65:0,69,1572	0/0:52,0:52:99:0,126,2881	0/0:21,0:21:54.19:0,54,1216	0/0:38,0:38:99:0,102,2174	0/0:43,0:40:99:0,105,2191	0/0:39,0:39:99:0,102,2110	0/0:45,0:45:99:0,117,2417	0/0:58,0:57:99:0,121,2983	0/0:51,0:50:99:0,135,2999	0/0:35,0:35:99:0,99,2127
chr10	36611643	.	T	TTA	3928.98	PASS	AC=36;AF=0.667;AN=54;BaseQRankSum=-8.146;DP=243;FS=1.512;HRun=0;HaplotypeScore=35.9459;InbreedingCoeff=0.7130;MQ=79.23;MQ0=2;MQRankSum=0.106;QD=24.56;ReadPosRankSum=-0.979;VQSLOD=3.6574;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,0:4:6:53,6,0	0/0:3,0:3:3.01:0,3,37	0/0:9,0:5:3.01:0,3,36	0/0:12,0:7:5.93:0,6,48	0/0:6,0:14:22.73:0,23,112	1/1:3,0:7:6:53,6,0	1/1:1,0:2:3:27,3,0	1/1:11,28:39:53.31:1250,53,0	0/0:2,0:6:11.36:0,11,56	1/1:2,1:8:12.61:91,13,0	1/1:3,0:6:5.84:40,6,0	1/1:0,2:2:6.02:98,6,0	1/1:2,5:7:15.05:244,15,0	1/1:0,0:2:3:27,3,0	1/1:5,0:10:12:105,12,0	0/0:1,0:7:11.09:0,11,56	0/0:3,0:16:34.09:0,34,168	1/1:7,0:14:15.01:132,15,0	1/1:4,11:15:33.11:539,33,0	1/1:2,4:6:12.04:196,12,0	1/1:1,1:2:3.01:49,3,0	./.	1/1:3,3:6:6.02:98,6,0	1/1:2,5:7:15.05:245,15,0	1/1:4,5:9:15.05:245,15,0	0/0:1,0:9:19.89:0,20,98	1/1:3,10:13:27.09:439,27,0	0/0:2,0:3:5.68:0,6,28
chr10	36611768	.	CATGTCAGGAAGATT	C	8361.87	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=12.553;DP=468;FS=1.290;HRun=0;HaplotypeScore=181.5376;InbreedingCoeff=0.9619;MQ=70.31;MQ0=0;MQRankSum=-10.885;QD=93.95;ReadPosRankSum=3.446;VQSLOD=4.9594;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:63.22:0,63,4321	0/0:7,0:7:21.07:0,21,1494	0/0:22,0:22:63.21:0,63,3601	0/0:18,0:18:49.66:0,50,2800	1/1:1,23:23:60.20:2160,60,0	0/0:12,0:12:33.11:0,33,2270	0/0:14,0:14:42.12:0,42,2643	0/0:38,0:37:99:0,108,7114	1/1:0,16:16:39.13:1686,39,0	0/0:24,0:24:66.23:0,66,4487	0/0:15,0:15:45.15:0,45,3053	0/0:12,0:12:36.11:0,36,2377	0/0:21,0:21:63.22:0,63,4396	0/0:15,0:15:45.15:0,45,3145	0/0:12,0:12:36.12:0,36,2333	1/1:2,17:19:51.18:2180,51,0	1/1:2,11:12:21.07:908,21,0	0/0:14,0:14:39.13:0,39,2505	0/0:21,0:20:63.22:0,63,4029	0/0:15,0:15:45.14:0,45,2944	0/0:23,0:23:69.22:0,69,4149	0/0:13,0:13:39.13:0,39,2780	0/0:13,0:13:39.13:0,39,2677	0/0:15,0:15:45.15:0,45,2895	0/0:14,0:14:42.14:0,42,2929	1/1:1,10:11:30.10:1297,30,0	0/0:19,0:19:57.20:0,57,3826	1/1:2,4:6:3.01:130,3,0
chr10	36612651	.	TTTCCC	T	10990.12	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=16.316;DP=628;FS=9.180;HRun=0;HaplotypeScore=115.1023;InbreedingCoeff=0.9994;MQ=59.71;MQ0=5;MQRankSum=-6.513;QD=51.60;ReadPosRankSum=0.377;VQSLOD=4.6419;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:63.22:0,63,1896	1/1:1,9:10:27.09:558,27,0	0/0:20,0:14:39.55:0,40,1113	0/0:24,0:17:41.22:0,41,1318	0/0:37,0:37:99:0,102,3067	0/0:31,0:31:87.27:0,87,2540	0/0:17,0:17:51.18:0,51,1574	1/1:1,27:28:78.21:1496,78,0	0/0:22,0:22:60.21:0,60,1799	0/0:28,0:28:75.25:0,75,2196	0/0:27,0:26:66.21:0,66,1901	0/0:22,0:22:63.21:0,63,1824	1/1:0,27:27:75.26:1561,75,0	1/1:0,15:15:33.11:692,33,0	0/0:26,0:26:75.24:0,75,2187	0/0:15,0:15:45.15:0,45,1395	0/0:16,0:16:48.16:0,48,1488	0/0:26,0:26:75.26:0,75,2320	1/1:3,10:13:30.10:597,30,0	1/1:0,28:27:81.24:1651,81,0	1/1:1,14:15:27.09:566,27,0	1/1:0,20:20:57.11:1110,57,0	0/0:24,0:24:69.22:0,69,2067	0/0:18,0:18:51.18:0,51,1580	1/1:0,26:26:54.19:1124,54,0	0/0:29,0:29:84.27:0,84,2493	1/1:0,31:31:78.27:1635,78,0	0/0:9,0:9:27.08:0,27,728
chr10	36615139	.	CA	C	2303.09	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-0.820;DP=555;FS=2.061;HRun=7;HaplotypeScore=103.6218;InbreedingCoeff=0.8942;MQ=55.37;MQ0=19;MQRankSum=2.727;QD=16.81;ReadPosRankSum=1.128;VQSLOD=3.3509;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,21:25:51.16:518,51,0	0/0:13,0:13:39.12:0,39,483	0/0:13,0:1:3.01:0,3,32	0/0:9,0:1:1.55:0,2,4	0/0:27,0:27:65.13:0,65,663	1/1:15,3:17:11.82:105,12,0	1/1:1,7:7:18.04:183,18,0	0/0:27,0:26:60.19:0,60,754	0/0:24,0:24:62.08:0,62,630	1/1:16,5:20:50.44:510,50,0	1/1:4,17:21:47.90:471,48,0	0/0:18,0:18:36.11:0,36,452	0/0:22,0:22:57.17:0,57,704	0/0:21,0:20:42.13:0,42,538	1/1:0,17:17:45.10:459,45,0	0/0:26,0:24:59.09:0,59,647	0/0:25,0:23:62.97:0,63,688	1/1:18,7:25:28.11:248,28,0	0/0:18,0:14:33.58:0,34,414	0/0:29,0:29:78.24:0,78,966	0/0:8,0:8:15.05:0,15,188	0/0:23,0:23:63.20:0,63,790	0/0:26,0:26:51.63:0,52,641	0/0:18,0:18:42.13:0,42,537	0/0:24,0:24:60.19:0,60,760	0/0:18,1:19:11.41:0,11,407	0/0:26,0:26:69.22:0,69,876	0/0:2,0:2:2.96:0,3,19
chr10	36615199	.	G	GA	4827.54	PASS	AB=0.806;AC=23;AF=0.411;AN=56;BaseQRankSum=3.046;DP=575;FS=14.206;HRun=3;HaplotypeScore=126.3111;InbreedingCoeff=0.6238;MQ=50.62;MQ0=25;MQRankSum=-0.827;QD=17.00;ReadPosRankSum=1.209;VQSLOD=3.6462;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:25:62.95:0,63,666	1/1:4,6:10:25.88:236,26,0	0/0:12,1:3:9.03:0,9,105	0/1:23,0:4:4.42:4,0,74	0/0:33,0:33:38.45:0,38,383	0/0:16,0:16:24.07:0,24,280	0/0:13,0:11:30.09:0,30,352	0/1:22,4:14:61.07:61,0,89	0/0:25,0:24:50.48:0,50,450	0/0:25,0:25:69.12:0,69,791	0/0:21,0:21:54.16:0,54,642	1/1:7,11:17:32.84:375,33,0	1/1:8,14:22:55.98:600,56,0	1/1:7,7:13:26.54:290,27,0	0/0:21,1:21:54.17:0,54,647	0/0:15,0:13:24.85:0,25,227	0/0:28,0:26:54.21:0,54,396	0/0:30,0:29:56.91:0,57,647	0/1:17,6:14:99:256,0,103	1/1:8,13:21:62.13:692,62,0	1/1:0,8:5:8.89:130,9,0	0/1:7,10:17:25.03:425,0,25	1/1:19,0:18:6.11:43,6,0	0/1:11,6:17:5.44:190,0,5	1/1:13,23:36:79.66:892,80,0	0/0:16,0:15:29.51:0,30,214	1/1:16,14:30:59.32:632,59,0	0/0:7,0:7:7.63:0,8,27
chr10	36615200	.	AAAG	A	6647.21	PASS	AB=0.911;AC=29;AF=0.518;AN=56;BaseQRankSum=-3.223;DP=573;FS=8.833;HRun=0;HaplotypeScore=135.0413;InbreedingCoeff=0.2638;MQ=50.42;MQ0=26;MQRankSum=0.547;QD=16.49;ReadPosRankSum=-0.658;VQSLOD=3.8130;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:25:72.23:0,72,1062	1/1:6,4:10:24.37:313,24,0	0/0:14,0:3:9.03:0,9,108	0/1:24,0:4:16.34:16,0,70	0/1:32,0:32:99:604,0,402	0/0:17,0:17:30.09:0,30,457	0/0:12,0:10:30.09:0,30,432	0/1:18,8:14:8.03:253,0,8	0/1:24,0:23:99:398,0,558	0/0:25,0:25:68.96:0,69,1223	0/0:22,0:22:54.18:0,54,1061	1/1:11,7:17:18.08:300,18,0	1/1:15,7:22:34.82:506,35,0	1/1:7,7:13:16.62:254,17,0	0/0:23,0:22:57.18:0,57,894	0/1:15,0:13:86.15:86,0,415	0/1:28,0:26:99:558,0,322	0/0:30,0:29:60.19:0,60,911	0/1:19,5:15:7.64:359,0,8	1/1:14,7:21:47.12:672,47,0	1/1:8,0:5:14.98:177,15,0	0/1:12,5:17:44.70:249,0,45	0/1:19,0:18:1.32:1,0,57	0/1:8,9:17:3.92:136,0,4	1/1:25,10:35:50.66:741,51,0	0/1:15,0:14:99:228,0,224	1/1:15,12:27:42.23:603,42,0	1/1:7,0:7:8.36:193,8,0
chr10	36615203	.	G	GA	7460.97	PASS	AB=0.694;AC=34;AF=0.607;AN=56;BaseQRankSum=0.477;DP=583;FS=13.034;HRun=3;HaplotypeScore=117.3043;InbreedingCoeff=0.4735;MQ=53.34;MQ0=27;MQRankSum=1.248;QD=18.07;ReadPosRankSum=2.611;VQSLOD=3.6836;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:25:65.81:0,66,653	1/1:4,6:10:28.82:267,29,0	0/0:15,0:4:9.03:0,9,108	0/1:30,1:6:18.24:18,0,81	0/1:12,22:34:99:701,0,130	0/0:17,0:17:33.10:0,33,388	0/0:12,0:10:24.07:0,24,279	1/1:21,4:13:1.67:199,2,0	0/1:13,11:23:99:379,0,199	0/0:24,0:24:63.78:0,64,755	0/0:22,0:22:54.15:0,54,627	1/1:7,11:17:32.28:371,32,0	1/1:7,14:21:55.53:606,56,0	1/1:8,7:14:26.64:293,27,0	0/0:22,0:21:57.17:0,57,666	0/1:8,7:13:99:251,0,118	0/1:10,19:27:99:547,0,107	0/0:31,0:30:56.91:0,57,650	1/1:16,7:15:38.74:375,39,0	1/1:9,14:23:59.98:655,60,0	1/1:1,7:5:12.10:121,12,0	1/1:8,10:18:0.33:380,0,0	1/1:0,0:18:11.48:82,11,0	1/1:10,6:16:22.17:220,22,0	1/1:10,24:34:79.19:891,79,0	0/1:6,10:15:94.18:254,0,94	1/1:12,15:27:58.12:613,58,0	1/1:0,7:7:21.01:238,21,0
chr10	36616451	.	CTA	C	4526.51	PASS	AB=0.585;AC=11;AF=0.196;AN=56;BaseQRankSum=13.478;DP=669;FS=1.236;HRun=0;HaplotypeScore=83.4241;InbreedingCoeff=0.8853;MQ=62.00;MQ0=2;MQRankSum=-1.438;QD=32.80;ReadPosRankSum=3.880;VQSLOD=7.1707;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:38.90:0,39,683	0/0:15,0:15:45.15:0,45,815	0/0:17,0:18:48.10:0,48,759	0/0:9,0:7:21.07:0,21,351	1/1:1,27:28:72.24:1031,72,0	0/0:25,0:25:66.23:0,66,1202	0/0:10,0:10:27.08:0,27,465	0/0:34,0:34:96.30:0,96,1609	1/1:0,26:26:69.23:988,69,0	0/0:38,0:38:99:0,102,1783	0/0:25,0:25:75.24:0,75,1345	0/0:27,0:27:78.27:0,78,1423	0/0:20,0:20:60.19:0,60,1068	0/0:26,0:26:78.23:0,78,1355	0/0:29,0:29:87.30:0,87,1584	1/1:0,31:30:72.24:1032,72,0	1/1:1,16:17:36.12:515,36,0	0/0:27,0:27:67.12:0,67,1191	0/0:20,0:20:57.20:0,57,1024	0/0:39,0:39:99:0,111,1926	0/0:29,0:29:87.26:0,87,1507	0/0:21,0:21:63.19:0,63,1095	0/0:19,0:19:57.18:0,57,987	0/0:19,0:19:45.15:0,45,815	0/0:26,0:26:78.25:0,78,1399	0/1:7,17:23:52.87:617,0,53	0/0:35,0:35:96.27:0,96,1674	1/1:0,12:12:24.08:344,24,0
chr10	36618504	.	TAGAG	T	192.41	PASS	AB=0.875;AC=12;AF=0.545;AN=22;BaseQRankSum=0.225;DP=94;FS=5.332;HRun=0;HaplotypeScore=19.2629;InbreedingCoeff=0.3893;MQ=28.40;MQ0=35;MQRankSum=0.193;QD=5.66;ReadPosRankSum=-1.222;VQSLOD=0.4137;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	0/1:4,2:3:0:0,0,0	./.	./.	./.	1/1:3,0:1:3.01:45,3,0	0/0:1,0:1:0:0,0,0	0/0:1,0:1:0.47:0,0,1	./.	./.	./.	0/1:3,0:3:0:0,0,0	./.	0/0:18,0:12:6.14:0,6,148	1/1:9,0:3:3:39,3,0	./.	./.	./.	./.	1/1:2,0:1:3.01:45,3,0	./.	./.	1/1:3,2:3:4.31:87,4,0	1/1:3,0:4:6.01:60,6,0	0/0:4,0:3:4.57:0,5,68
chr10	36618610	.	AAAAC	A	2701.23	PASS	AB=0.833;AC=15;AF=0.268;AN=56;BaseQRankSum=-0.685;DP=366;FS=13.462;HRun=0;HaplotypeScore=92.3020;InbreedingCoeff=0.7852;MQ=74.71;MQ0=16;MQRankSum=-7.106;QD=36.02;ReadPosRankSum=-0.475;VQSLOD=2.8264;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,11:12:24.08:433,24,0	0/0:3,0:3:8.80:0,9,55	0/0:48,0:11:0.87:0,1,92	0/0:55,0:19:17.39:0,17,148	0/0:17,0:17:45.78:0,46,304	1/1:2,2:4:12.04:214,12,0	1/1:4,6:9:21.06:354,21,0	0/0:13,0:12:32.41:0,32,232	0/0:2,0:2:5.75:0,6,30	1/1:7,9:16:45.13:784,45,0	1/1:3,6:9:21.07:364,21,0	0/0:8,0:8:22.84:0,23,143	0/0:4,0:4:5.90:0,6,39	0/0:7,0:7:20.16:0,20,137	1/1:5,5:9:27:393,27,0	0/0:6,0:6:17.49:0,17,109	0/0:20,0:20:38.51:0,39,208	1/1:7,2:9:26.91:311,27,0	0/0:17,0:15:40.47:0,40,257	0/0:15,0:15:38.82:0,39,244	0/0:6,0:4:2.90:0,3,16	0/0:8,0:8:17.57:0,18,109	0/0:14,0:14:27.18:0,27,161	0/0:15,0:15:34.83:0,35,250	0/0:12,0:12:29.17:0,29,176	0/1:4,1:4:41.48:41,0,44	0/0:10,0:10:28.76:0,29,183	0/0:11,0:7:17.42:0,17,99
chr10	36618614	.	CAA	C	3085.13	PASS	AC=54;AF=0.964;AN=56;BaseQRankSum=-0.441;DP=377;FS=16.066;HRun=16;HaplotypeScore=81.5622;InbreedingCoeff=0.2190;MQ=74.36;MQ0=20;MQRankSum=0.487;QD=9.83;ReadPosRankSum=3.978;VQSLOD=0.7718;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:12,0:12:21.24:85,21,0	1/1:3,0:3:5.85:49,6,0	1/1:52,0:10:0.60:9,1,0	0/0:63,0:22:2.23:0,2,41	1/1:4,12:16:35.68:287,36,0	1/1:4,0:4:9.85:38,10,0	1/1:11,0:10:7.97:54,8,0	1/1:13,0:10:1.45:120,1,0	1/1:1,1:2:5.99:50,6,0	1/1:16,0:16:32.89:134,33,0	1/1:9,0:9:17.93:71,18,0	1/1:8,1:8:0.14:123,0,0	1/1:4,1:4:2.90:25,3,0	1/1:6,1:7:19.84:136,20,0	1/1:10,0:9:15.91:64,16,0	1/1:4,2:6:11.84:100,12,0	1/1:13,8:21:29.72:234,30,0	1/1:9,0:9:8.61:34,9,0	1/1:14,3:15:29.66:231,30,0	1/1:13,2:15:41:300,41,0	1/1:6,0:4:3:25,3,0	1/1:6,1:7:17.73:137,18,0	1/1:12,1:13:21.83:171,22,0	1/1:14,0:14:29.09:215,29,0	1/1:10,2:12:17.94:149,18,0	1/1:4,1:4:8.49:59,8,0	1/1:10,0:10:18.54:154,19,0	1/1:7,3:6:14.97:123,15,0
chr10	36618628	.	AAAC	A	2218.72	PASS	AB=1.000;AC=50;AF=0.893;AN=56;BaseQRankSum=2.769;DP=422;FS=3.092;HRun=0;HaplotypeScore=95.6894;InbreedingCoeff=-0.1424;MQ=63.11;MQ0=26;MQRankSum=-0.220;QD=5.26;ReadPosRankSum=2.438;VQSLOD=2.0675;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:14:25.69:178,26,0	1/1:6,0:6:10.56:40,11,0	0/1:65,0:9:14.41:14,0,35	0/1:68,0:21:9.11:18,0,9	1/1:17,0:17:16.38:129,16,0	1/1:5,0:5:11.05:64,11,0	1/1:12,0:11:17.55:141,18,0	1/1:17,0:13:5.34:127,5,0	1/1:4,0:4:2.81:29,3,0	1/1:18,0:17:35.79:214,36,0	1/1:13,0:13:15.25:176,15,0	1/1:10,0:9:4.77:57,5,0	1/1:4,0:3:2.84:14,3,0	1/1:8,0:8:3.47:31,3,0	1/1:9,0:8:23.38:146,23,0	1/1:5,0:5:10.84:60,11,0	1/1:10,10:20:30.74:267,31,0	1/1:9,0:9:24.70:118,25,0	0/1:17,0:15:25.98:26,0,35	0/1:18,0:18:16.23:53,0,16	1/1:8,0:5:4.40:17,4,0	1/1:6,0:6:7.20:38,7,0	1/1:12,0:12:13.75:74,14,0	1/1:16,0:16:20.84:117,21,0	1/1:8,0:8:6.23:48,6,0	0/1:12,0:11:3.81:44,0,4	1/1:9,0:9:7.85:34,8,0	0/1:12,0:8:6.46:64,0,6
chr10	36618630	.	AC	A	2491.76	PASS	AB=0.847;AC=49;AF=0.875;AN=56;BaseQRankSum=1.114;DP=419;FS=3.329;HRun=1;HaplotypeScore=84.1144;InbreedingCoeff=-0.1444;MQ=62.19;MQ0=25;MQRankSum=0.877;QD=5.95;ReadPosRankSum=2.285;VQSLOD=0.9304;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:14:17.20:83,17,0	0/1:2,5:7:9.21:39,0,9	0/1:56,5:9:18.04:18,0,32	0/1:63,2:18:13.71:14,0,35	1/1:17,0:17:7.22:68,7,0	1/1:6,0:6:13.08:54,13,0	1/1:12,0:11:16.93:87,17,0	1/1:3,14:13:22.40:204,22,0	1/1:4,0:4:2.40:10,2,0	1/1:16,0:15:35.47:146,35,0	1/1:13,0:13:16.81:127,17,0	1/1:7,3:9:19.22:155,19,0	1/1:2,2:3:3:27,3,0	1/1:5,3:8:7.36:122,7,0	1/1:9,0:8:21.61:101,22,0	1/1:5,0:5:7.01:23,7,0	1/1:20,0:20:22.80:99,23,0	1/1:10,0:10:24.86:124,25,0	0/1:7,9:14:31.55:106,0,32	0/1:16,5:21:4.20:202,0,4	1/1:3,5:5:4.56:31,5,0	1/1:4,2:6:5.59:84,6,0	1/1:2,10:12:10.48:157,10,0	1/1:11,6:17:32.69:244,33,0	1/1:2,6:8:0.49:89,0,0	0/1:12,0:11:2.62:27,0,3	1/1:6,2:8:20.50:157,21,0	0/1:12,0:8:10.67:15,0,11
chr10	36618631	.	CAAA	C	1568.51	PASS	AB=0.762;AC=17;AF=0.304;AN=56;BaseQRankSum=3.438;DP=420;FS=1.711;HRun=16;HaplotypeScore=97.0483;InbreedingCoeff=0.7321;MQ=59.53;MQ0=26;MQRankSum=-5.874;QD=9.17;ReadPosRankSum=1.118;VQSLOD=0.4935;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,7:15:26.97:293,27,0	0/0:6,0:7:14.59:0,15,124	0/0:63,0:9:9.43:0,9,88	0/1:65,0:18:0.61:1,0,89	0/0:11,0:17:12.31:0,12,118	1/1:4,2:6:14.92:152,15,0	1/1:6,6:11:20.81:236,21,0	0/0:16,0:13:19.05:0,19,149	0/1:1,0:4:0.12:0,0,33	1/1:5,10:15:29.97:324,30,0	1/1:6,7:13:25.20:301,25,0	0/0:9,0:9:23.77:0,24,153	0/0:4,0:3:2.92:0,3,17	0/0:8,0:8:20.59:0,21,150	1/1:3,6:8:18:203,18,0	0/0:3,0:5:6.88:0,7,27	0/1:12,0:20:15.33:29,0,15	1/1:7,3:10:12.90:219,13,0	0/0:15,0:14:35.34:0,35,316	0/0:20,0:21:52.93:0,53,419	0/0:8,0:5:5.91:0,6,40	0/0:6,0:6:17.59:0,18,119	0/0:12,0:12:25.43:0,25,172	0/0:17,0:17:34.29:0,34,238	0/0:8,0:8:17.78:0,18,135	0/0:4,0:11:13.31:0,13,113	0/0:8,0:8:23.75:0,24,172	0/0:6,0:6:13.41:0,13,97
chr10	36619896	.	C	CT	736.19	PASS	AB=0.667;AC=8;AF=0.143;AN=56;BaseQRankSum=7.322;DP=748;FS=37.541;HRun=0;HaplotypeScore=89.9239;InbreedingCoeff=0.0806;MQ=52.14;MQ0=73;MQRankSum=0.080;QD=4.60;ReadPosRankSum=2.919;VQSLOD=1.3867;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:20,14:23:17.84:18,0,342	0/0:17,0:17:51.15:0,51,693	0/0:21,0:4:11.99:0,12,131	0/0:15,0:5:14.95:0,15,150	0/0:37,0:37:99:0,111,1549	0/1:6,13:9:35.90:36,0,113	0/1:13,6:13:81.79:82,0,341	0/0:21,0:19:54.16:0,54,723	0/0:39,0:39:99:0,108,1486	0/1:4,23:9:14.75:321,0,15	1/1:2,17:2:6.02:78,6,0	0/0:39,0:39:99:0,111,1517	0/0:24,0:24:66.19:0,66,888	0/0:33,0:33:96.31:0,96,1326	0/1:15,17:16:99:257,0,137	0/0:33,0:33:90.29:0,90,1240	0/0:33,0:33:96.29:0,96,1320	0/1:6,3:7:80.74:81,0,111	0/0:22,0:20:57.07:0,57,748	0/0:32,0:32:96.28:0,96,1290	0/0:27,0:27:78.24:0,78,1074	0/0:24,0:24:72.23:0,72,989	0/0:27,0:27:78.23:0,78,1054	0/0:33,0:33:99:0,99,1322	0/0:31,0:31:92.88:0,93,1250	0/0:34,0:34:99:0,102,1390	0/0:37,0:37:99:0,111,1496	0/0:9,0:9:27.09:0,27,377
chr10	36620302	.	C	CA	3030.09	PASS	AB=0.750;AC=12;AF=0.214;AN=56;BaseQRankSum=-8.009;DP=634;FS=1.797;HRun=9;HaplotypeScore=66.2061;InbreedingCoeff=0.8292;MQ=72.45;MQ0=0;MQRankSum=-0.791;QD=20.47;ReadPosRankSum=2.526;VQSLOD=4.4133;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,1:37:50.67:0,51,652	0/0:15,0:15:38.96:0,39,336	0/0:24,1:25:22.18:0,22,383	0/0:19,0:18:28.47:0,28,232	1/1:4,28:32:26.06:731,26,0	0/0:17,1:18:20.85:0,21,409	0/0:26,0:26:68.93:0,69,592	0/0:26,0:27:58.99:0,59,493	1/1:5,24:29:37.12:638,37,0	0/0:35,0:35:74.96:0,75,651	0/0:16,0:14:38.03:0,38,319	0/0:27,0:28:71:0,71,601	0/0:21,0:21:56.99:0,57,495	0/0:12,0:11:26.99:0,27,234	0/0:26,1:28:31.85:0,32,494	1/1:5,18:23:28.11:538,28,0	1/1:1,16:17:45.12:498,45,0	0/0:17,1:18:14.78:0,15,351	0/0:14,0:14:32.95:0,33,280	0/0:18,0:18:47.98:0,48,416	0/1:12,1:13:0.19:0,0,227	0/0:25,0:25:65.97:0,66,569	0/0:24,0:24:65.96:0,66,569	0/0:26,0:26:27.22:0,27,456	0/0:22,0:22:62.99:0,63,547	1/1:5,21:26:37.10:628,37,0	0/0:30,0:30:80.95:0,81,699	0/1:2,6:8:28.04:175,0,28
chr10	36620474	.	GACACACACAC	G	1845.87	PASS	AB=0.907;AC=8;AF=0.148;AN=54;BaseQRankSum=1.416;DP=666;FS=10.074;HRun=0;HaplotypeScore=202.6131;InbreedingCoeff=0.0574;MQ=51.53;MQ0=18;MQRankSum=-3.882;QD=7.85;ReadPosRankSum=1.429;VQSLOD=1.5917;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:53,4:56:99:436,0,452	0/0:15,0:14:6.02:0,6,87	./.	0/0:21,0:16:0.89:0,1,2	0/0:7,0:9:9.03:0,9,414	0/1:25,3:29:99:383,0,140	0/1:27,2:26:99:165,0,250	0/0:31,0:30:10.28:0,10,342	0/0:15,0:15:21.07:0,21,998	0/1:26,1:25:76.25:76,0,245	0/1:22,5:25:99:342,0,124	0/0:28,0:28:21.07:0,21,899	0/0:18,0:18:15.52:0,16,595	0/0:19,0:18:3.01:0,3,133	1/1:38,4:42:12.04:325,12,0	0/0:29,0:30:44.55:0,45,1938	0/0:17,0:27:27.09:0,27,1258	0/1:19,2:23:99:253,0,674	0/0:15,0:12:12.40:0,12,350	0/0:11,0:11:3.01:0,3,138	0/0:24,0:23:12.04:0,12,510	0/0:16,0:16:9.03:0,9,348	0/0:16,0:16:18.53:0,19,748	0/0:37,0:37:51.17:0,51,1904	0/0:19,0:17:11.98:0,12,391	0/0:12,0:14:22.27:0,22,725	0/0:26,0:25:21.07:0,21,861	0/0:9,0:7:15.05:0,15,525
chr10	36620512	.	C	CACAT	1220.76	PASS	AB=0.914;AC=9;AF=0.161;AN=56;BaseQRankSum=1.102;DP=727;FS=17.398;HRun=0;HaplotypeScore=161.9384;InbreedingCoeff=0.2074;MQ=51.08;MQ0=22;MQRankSum=1.846;QD=6.74;ReadPosRankSum=4.119;VQSLOD=1.7872;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:55:67.27:0,67,533	0/0:14,0:12:8.65:0,9,66	0/0:28,0:10:20.19:0,20,236	0/0:23,0:7:21.03:0,21,233	0/0:18,0:17:31.75:0,32,242	0/0:24,0:24:47.49:0,47,407	0/0:33,0:29:13.16:0,13,395	0/0:24,0:24:64.78:0,65,527	0/0:29,0:29:71.92:0,72,731	0/0:17,0:16:44.97:0,45,402	0/1:19,0:18:11.77:12,0,176	0/1:7,2:29:54.62:206,0,55	0/0:26,0:26:31.28:0,31,334	0/1:21,0:20:14.31:14,0,186	0/0:26,0:26:33.56:0,34,272	0/0:36,0:35:53.22:0,53,528	0/0:35,0:34:62.46:0,62,599	0/0:22,0:22:5.10:0,5,261	0/0:13,0:12:26.54:0,27,215	0/0:16,0:15:23.69:0,24,181	0/0:39,0:36:8.97:0,9,434	0/0:18,0:18:26.94:0,27,218	1/1:4,21:27:18.07:430,18,0	1/1:14,23:44:0.10:644,0,0	0/1:15,0:13:30.61:31,0,37	0/0:25,0:23:46.65:0,47,503	0/1:24,0:23:23.93:24,0,202	0/0:24,0:22:58.54:0,59,474
chr10	36621683	.	GA	G	3935.85	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=9.690;DP=728;FS=16.935;HRun=9;HaplotypeScore=90.5745;InbreedingCoeff=0.9968;MQ=70.87;MQ0=6;MQRankSum=-1.071;QD=18.92;ReadPosRankSum=2.337;VQSLOD=2.6362;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,37:37:96.05:878,96,0	0/0:12,0:12:30.09:0,30,346	0/0:32,1:31:69.08:0,69,738	0/0:23,0:21:35.72:0,36,348	0/0:36,0:35:96.25:0,96,1080	1/1:1,28:27:69.04:630,69,0	1/1:5,20:22:40.76:344,41,0	0/0:32,0:31:72.17:0,72,808	0/0:18,0:18:54.16:0,54,623	1/1:7,28:32:75.04:686,75,0	1/1:3,18:19:45.01:409,45,0	0/0:29,0:29:78.23:0,78,901	0/0:33,0:32:90.25:0,90,1028	0/0:22,0:22:57.14:0,57,646	1/1:7,30:35:72.03:659,72,0	0/0:21,0:21:54.16:0,54,623	0/0:29,0:28:84.17:0,84,941	1/1:3,19:21:36.02:330,36,0	0/0:15,1:17:30.40:0,30,419	0/0:37,1:38:68.76:0,69,1011	0/0:19,0:19:51.15:0,51,588	0/0:21,0:21:57.16:0,57,646	0/0:31,0:31:84.21:0,84,949	0/0:21,0:21:51.15:0,51,589	0/0:24,0:24:63.18:0,63,719	0/0:24,0:24:66.20:0,66,761	0/0:32,0:30:75.16:0,75,827	0/0:4,0:5:14.88:0,15,153
chr10	36625463	.	A	ACC	466.44	PASS	AC=12;AF=0.222;AN=54;BaseQRankSum=8.258;DP=642;FS=5.255;HRun=0;HaplotypeScore=79.8668;InbreedingCoeff=0.9146;MQ=78.57;MQ0=2;MQRankSum=-7.839;QD=8.04;ReadPosRankSum=-3.068;VQSLOD=2.2637;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,10:3:6.02:70,6,0	0/0:14,0:14:39.12:0,39,612	0/0:20,0:20:60.14:0,60,872	0/0:30,0:30:84.28:0,84,1325	0/0:21,0:21:63.22:0,63,1024	1/1:4,6:4:11.87:92,12,0	./.	0/0:38,0:38:99:0,114,1769	0/0:29,0:29:87.28:0,87,1392	1/1:3,7:6:14.97:146,15,0	1/1:3,7:10:17.57:145,18,0	0/0:32,0:32:96.33:0,96,1566	0/0:41,0:41:99:0,117,1854	0/0:23,0:23:69.24:0,69,1120	1/1:5,9:8:17.84:160,18,0	0/0:44,0:44:99:0,129,2003	0/0:34,0:34:99:0,102,1553	1/1:2,1:2:2.98:22,3,0	0/0:29,0:29:87.27:0,87,1372	0/0:26,0:26:75.23:0,75,1173	0/0:56,0:56:99:0,165,2505	0/0:22,0:22:63.22:0,63,1022	0/0:21,0:21:57.18:0,57,904	0/0:33,0:33:93.27:0,93,1487	0/0:19,0:18:57.18:0,57,906	0/0:28,1:28:81.26:0,81,1277	0/0:17,0:17:51.13:0,51,752	0/0:3,0:3:9.03:0,9,147
chr10	36627751	.	TA	T	3064.16	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-1.900;DP=351;FS=0.456;HRun=5;HaplotypeScore=43.8403;InbreedingCoeff=0.9048;MQ=64.38;MQ0=4;MQRankSum=1.064;QD=26.88;ReadPosRankSum=3.627;VQSLOD=2.8798;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,18:18:36.10:407,36,0	0/0:5,0:5:12.04:0,12,161	0/0:11,0:6:13.26:0,13,125	0/0:14,0:5:8.82:0,9,93	0/0:22,0:22:66.18:0,66,830	1/1:0,25:25:69.12:755,69,0	1/1:0,5:5:12.03:136,12,0	0/0:37,0:35:99:0,99,1221	0/0:8,0:8:24.08:0,24,322	1/1:0,17:17:51.13:568,51,0	1/1:1,13:14:39.07:427,39,0	0/0:9,0:9:21.07:0,21,281	0/0:10,0:10:21.05:0,21,264	0/0:14,0:14:39.13:0,39,523	1/1:2,16:18:45.13:509,45,0	0/0:6,0:6:15.05:0,15,201	0/0:15,0:15:45.10:0,45,568	1/1:1,16:17:42.05:458,42,0	0/0:14,0:14:32.95:0,33,462	0/0:10,0:10:27.09:0,27,362	0/0:6,0:6:9.03:0,9,120	0/0:4,0:4:12.03:0,12,146	0/0:1,0:1:3.01:0,3,40	0/0:2,0:2:6.01:0,6,65	0/0:10,0:10:27.09:0,27,362	0/0:18,0:18:48.14:0,48,614	0/0:10,0:10:24.08:0,24,321	0/0:11,0:11:33.11:0,33,437
chr10	36628702	.	AAAAGAAAG	A	6892.38	PASS	AB=0.844;AC=37;AF=0.712;AN=52;BaseQRankSum=-4.404;DP=467;FS=21.683;HRun=0;HaplotypeScore=130.4253;InbreedingCoeff=0.4026;MQ=47.50;MQ0=21;MQRankSum=-0.042;QD=18.58;ReadPosRankSum=0.224;VQSLOD=2.8423;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:0.47:0,0,1	1/1:5,3:8:15.05:370,15,0	./.	./.	0/1:14,0:26:3.50:316,0,3	0/0:18,0:16:0.78:0,1,124	0/0:17,0:17:28.31:0,28,206	1/1:27,0:19:23.93:199,24,0	1/1:8,0:11:6.31:253,6,0	0/1:26,0:25:22.84:23,0,119	0/1:21,0:21:10.73:11,0,23	1/1:8,5:13:30.04:501,30,0	1/1:13,6:19:36.06:639,36,0	1/1:15,0:15:20.99:262,21,0	1/1:21,0:21:5.88:36,6,0	0/1:7,0:9:3.45:225,0,3	0/1:21,0:21:2.61:196,0,3	0/0:15,0:14:14.42:0,14,87	1/1:10,7:11:12.01:128,12,0	1/1:10,5:15:39.06:682,39,0	1/1:6,0:6:6.01:75,6,0	1/1:10,2:12:21.03:337,21,0	1/1:9,5:13:21.06:425,21,0	1/1:16,1:17:20.76:340,21,0	1/1:17,8:25:53.82:932,54,0	1/1:9,0:17:14.19:415,14,0	1/1:13,5:17:36.03:527,36,0	0/0:2,0:2:2.97:0,3,21
chr10	36628718	.	GAAAGAAAGAAAGAAAGAAAC	G	4637.31	PASS	AB=1.000;AC=19;AF=0.365;AN=52;BaseQRankSum=-1.469;DP=485;FS=4.883;HRun=0;HaplotypeScore=247.6810;InbreedingCoeff=0.3867;MQ=47.84;MQ0=21;MQRankSum=0.514;QD=18.85;ReadPosRankSum=1.196;VQSLOD=3.4515;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:4,21:25:9.03:288,9,0	0/0:9,0:9:27.08:0,27,954	./.	./.	0/1:26,0:25:99:452,0,390	1/1:14,0:12:30.06:549,30,0	1/1:16,0:16:42.06:645,42,0	0/0:27,0:15:39.10:0,39,576	0/1:12,0:10:17.61:257,0,18	1/1:1,27:27:68.96:919,69,0	1/1:3,18:21:20.68:350,21,0	0/0:17,0:17:42.14:0,42,1286	0/0:19,0:19:51.13:0,51,1341	0/0:14,0:14:30.10:0,30,802	1/1:1,22:23:6.02:255,6,0	0/1:16,0:12:99:110,0,307	0/1:26,0:21:99:108,0,459	0/1:12,0:11:19.04:282,0,19	0/0:20,0:14:33.06:0,33,740	0/0:19,0:19:57.19:0,57,1627	0/0:5,0:5:12.02:0,12,274	0/0:13,0:13:33.09:0,33,1010	0/0:19,0:18:54.15:0,54,1955	0/0:18,0:18:25.14:0,25,788	0/0:21,0:21:57.18:0,57,1294	0/1:19,0:17:99:389,0,263	0/0:21,0:20:48.14:0,48,1360	0/1:8,0:6:32.96:33,0,59
chr10	36628794	.	GAAAGA	G	6571.25	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-7.128;DP=572;FS=0.434;HRun=0;HaplotypeScore=131.8063;InbreedingCoeff=0.9131;MQ=61.95;MQ0=14;MQRankSum=1.412;QD=30.71;ReadPosRankSum=2.017;VQSLOD=4.8177;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:23.68:0,24,1329	1/1:5,10:15:27.09:509,27,0	0/0:36,0:22:20.94:0,21,348	0/0:50,0:20:16.31:0,16,211	0/0:7,0:31:21.04:0,21,355	0/0:27,0:27:81.27:0,81,2148	0/0:18,0:17:36.12:0,36,923	1/1:12,11:21:30.09:444,30,0	0/0:2,0:8:9.03:0,9,171	0/0:30,0:29:72.25:0,72,1994	0/0:20,0:20:51.17:0,51,1388	1/1:4,9:13:15.05:283,15,0	1/1:2,10:11:21.07:396,21,0	1/1:4,12:16:27.09:507,27,0	0/0:19,0:19:18.06:0,18,429	0/0:9,0:17:9.03:0,9,163	0/0:9,0:18:6.02:0,6,105	0/0:14,0:12:30.10:0,30,767	1/1:3,6:9:18.03:255,18,0	1/1:4,12:16:27.09:467,27,0	1/1:1,1:2:3.01:57,3,0	1/1:5,16:21:39.13:695,39,0	1/1:8,17:25:45.15:848,45,0	1/1:3,11:14:24.05:417,24,0	1/1:1,20:21:36.12:678,36,0	0/0:7,0:28:62.09:0,62,833	1/1:6,19:25:54.19:1016,54,0	0/0:2,0:10:3.01:0,3,66
chr10	36630149	.	C	CATCT	18297.48	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-14.191;DP=668;FS=9.659;HRun=0;HaplotypeScore=102.4900;InbreedingCoeff=0.9964;MQ=74.63;MQ0=0;MQRankSum=-4.506;QD=58.46;ReadPosRankSum=2.348;VQSLOD=6.5277;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,15:24:50.50:1237,50,0	0/0:12,0:12:30.10:0,30,538	0/0:23,0:23:31.92:0,32,908	0/0:8,0:8:21.07:0,21,381	1/1:7,36:44:99:2513,99,0	1/1:3,12:15:36.12:905,36,0	1/1:4,12:17:24.08:628,24,0	0/0:44,0:44:99:0,126,2179	1/1:5,18:23:54.19:1366,54,0	1/1:4,39:45:99:3100,123,0	1/1:0,25:24:63.22:1587,63,0	0/0:22,0:22:63.14:0,63,1077	0/0:28,0:28:75.26:0,75,1350	0/0:28,0:28:78.27:0,78,1394	1/1:4,18:25:48.16:1159,48,0	1/1:3,21:25:57.20:1471,57,0	1/1:2,15:17:47.83:1158,48,0	1/1:5,11:16:39.10:902,39,0	0/0:10,0:10:24.06:0,24,363	0/0:39,0:39:99:0,111,1989	0/0:10,0:10:30.09:0,30,517	0/0:28,0:28:78.25:0,78,1388	0/0:25,0:25:75.26:0,75,1364	0/0:12,0:12:27.09:0,27,490	0/0:29,0:29:87.28:0,87,1524	1/1:3,24:28:75.24:1879,75,0	0/0:37,0:37:99:0,99,1787	1/1:0,9:9:15.05:393,15,0
chr10	36630254	.	TTCTCTCTCTC	T	4108.17	PASS	AB=0.630;AC=11;AF=0.196;AN=56;BaseQRankSum=3.561;DP=691;FS=2.559;HRun=0;HaplotypeScore=208.5192;InbreedingCoeff=0.8095;MQ=62.97;MQ0=9;MQRankSum=-6.442;QD=32.60;ReadPosRankSum=1.179;VQSLOD=3.4680;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:22:35.94:0,36,921	0/0:3,0:11:18.45:0,18,705	0/0:47,0:27:12.33:0,12,337	0/0:36,0:14:8.30:0,8,128	1/1:3,10:14:0.47:1,0,0	0/0:21,0:23:42.14:0,42,1524	0/0:12,0:12:24.07:0,24,857	0/0:34,0:44:89.35:0,89,2936	1/1:8,18:26:35.86:997,36,0	0/0:33,0:34:76.11:0,76,2811	0/0:19,0:19:39.05:0,39,1566	0/0:11,0:25:21.07:0,21,899	0/0:21,0:37:78.27:0,78,3035	0/0:15,0:21:33.11:0,33,1354	0/0:14,0:16:27.06:0,27,853	1/1:6,22:29:39.10:990,39,0	1/1:13,2:15:17.69:362,18,0	0/0:12,0:12:23.82:0,24,941	0/0:8,0:12:30.10:0,30,991	0/0:20,0:34:56.20:0,56,2061	0/0:12,0:24:27.09:0,27,933	0/0:21,0:31:36.12:0,36,1404	0/0:11,0:27:26.81:0,27,1026	0/0:4,0:13:21.07:0,21,796	0/0:13,0:31:48.16:0,48,1907	0/1:14,19:33:19.53:1382,0,20	0/0:14,0:28:60.09:0,60,2153	1/1:2,5:8:15.05:377,15,0
chr10	36630317	.	C	CTA	5853.58	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-10.032;DP=673;FS=8.473;HRun=0;HaplotypeScore=123.1746;InbreedingCoeff=0.9836;MQ=64.89;MQ0=3;MQRankSum=1.605;QD=36.13;ReadPosRankSum=0.534;VQSLOD=6.5144;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,16:23:58.08:958,58,0	0/0:12,0:12:24.08:0,24,312	0/0:14,0:13:24.55:0,25,312	0/0:25,0:22:14.41:0,14,303	0/0:28,0:27:59.97:0,60,760	1/1:4,19:23:39.13:663,39,0	1/1:3,8:12:18.06:306,18,0	0/0:34,0:34:99:0,99,1276	0/0:19,0:19:30.08:0,30,375	1/1:9,24:33:78.24:1275,78,0	1/1:3,23:26:48.16:816,48,0	0/0:26,0:26:57.19:0,57,741	0/0:27,0:27:51.15:0,51,649	0/0:20,0:20:48.13:0,48,596	1/1:2,25:27:60.20:1020,60,0	0/0:27,0:27:54.16:0,54,688	0/0:21,0:21:45.13:0,45,570	1/1:0,17:17:48.16:816,48,0	0/0:14,0:14:36.10:0,36,452	0/0:31,0:31:65.73:0,66,857	0/0:17,0:16:39.13:0,39,507	0/0:32,0:32:78.25:0,78,1012	0/0:25,0:25:60.19:0,60,777	0/0:10,0:10:21.07:0,21,273	0/0:34,0:34:66.21:0,66,858	0/0:40,2:41:9.22:0,9,1238	0/0:31,0:31:78.24:0,78,999	0/0:22,0:22:56.55:0,57,710
chr10	36630902	.	TTG	T	4400.07	PASS	AB=1.000;AC=22;AF=0.393;AN=56;BaseQRankSum=3.218;DP=537;FS=35.097;HRun=0;HaplotypeScore=113.2081;InbreedingCoeff=0.7080;MQ=68.61;MQ0=2;MQRankSum=-1.810;QD=16.36;ReadPosRankSum=4.778;VQSLOD=3.1442;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:29:20.10:184,0,20	0/0:11,0:11:28.87:0,29,164	0/0:26,0:22:43.71:0,44,491	0/0:11,0:6:7.52:0,8,92	1/1:1,26:27:71.51:898,72,0	0/1:19,0:19:4.63:115,0,5	1/1:15,0:15:16.08:118,16,0	0/0:19,0:19:34.88:0,35,220	1/1:1,10:11:18.06:243,18,0	0/1:30,0:29:12.07:148,0,12	0/1:19,0:19:39.14:79,0,39	0/0:14,0:13:34.50:0,35,185	0/0:9,0:9:20.21:0,20,111	0/0:18,0:18:46.13:0,46,251	1/1:25,0:25:30.83:190,31,0	1/1:1,12:13:30.10:405,30,0	1/1:4,29:33:77.11:1036,77,0	1/1:17,1:18:18.99:141,19,0	0/0:12,0:12:34.76:0,35,209	0/0:33,0:33:92.37:0,92,522	0/0:15,0:15:40.25:0,40,216	0/0:12,0:12:31.56:0,32,167	0/0:16,0:16:46.12:0,46,255	0/0:18,0:18:43.24:0,43,239	0/0:25,0:25:44.95:0,45,353	1/1:5,18:22:27.26:640,27,0	0/0:28,0:28:60.42:0,60,329	1/1:0,7:7:15.05:203,15,0
chr10	36630909	.	TG	T	6039.22	PASS	AB=0.933;AC=41;AF=0.732;AN=56;BaseQRankSum=-4.071;DP=545;FS=12.914;HRun=9;HaplotypeScore=102.8810;InbreedingCoeff=0.7944;MQ=70.47;MQ0=4;MQRankSum=0.009;QD=15.06;ReadPosRankSum=0.261;VQSLOD=3.5954;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:28:46.85:137,47,0	1/1:1,10:11:30.02:274,30,0	0/0:28,0:25:42.10:0,42,456	0/0:12,0:7:15.04:0,15,161	0/0:31,0:30:6.59:0,7,111	1/1:2,0:19:28.52:83,29,0	1/1:1,0:17:24.44:71,24,0	1/1:5,12:15:35.94:325,36,0	0/0:12,0:12:9.26:0,9,75	1/1:3,0:28:42.69:130,43,0	1/1:3,0:17:11.10:48,11,0	1/1:0,15:14:39.02:357,39,0	1/1:1,8:9:18.01:165,18,0	1/1:1,18:19:45.02:412,45,0	1/1:1,0:25:25.74:101,26,0	0/1:13,1:14:17.08:17,0,35	0/0:32,0:32:2.10:0,2,48	1/1:2,0:15:23.67:70,24,0	1/1:2,11:13:33.02:302,33,0	1/1:3,34:37:99:906,99,0	1/1:0,17:16:45.02:412,45,0	1/1:0,14:14:39:357,39,0	1/1:1,19:20:51.03:467,51,0	1/1:1,17:18:45.02:412,45,0	1/1:5,17:23:50.06:445,50,0	0/0:21,0:20:13.56:0,14,87	1/1:0,24:24:60.03:549,60,0	0/0:7,0:7:2.36:0,2,6
chr10	36632013	.	ACCCG	A	3906.56	PASS	AB=0.947;AC=23;AF=0.411;AN=56;BaseQRankSum=12.230;DP=541;FS=7.308;HRun=0;HaplotypeScore=110.6191;InbreedingCoeff=0.7225;MQ=64.83;MQ0=1;MQRankSum=-2.338;QD=18.09;ReadPosRankSum=5.726;VQSLOD=2.7036;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,21:22:15.05:299,15,0	0/0:8,0:8:24.07:0,24,540	0/0:37,0:34:99:0,102,2009	0/0:29,0:24:63.94:0,64,1125	1/1:14,0:12:1.04:159,1,0	1/1:2,13:12:15.05:299,15,0	1/1:0,24:21:6.02:96,6,0	0/0:32,0:31:90.23:0,90,1749	0/1:11,0:11:1.94:131,0,2	1/1:0,18:16:45.07:644,45,0	1/1:0,13:12:6.02:120,6,0	0/0:21,0:21:54:0,54,1090	0/0:22,0:22:57.11:0,57,1307	0/0:19,0:18:47.76:0,48,973	1/1:2,22:21:36.11:713,36,0	0/1:15,0:13:69.66:70,0,91	1/1:20,0:20:21.99:245,22,0	1/1:1,17:18:39.61:770,40,0	0/0:13,0:12:36.06:0,36,692	0/0:23,0:23:66.16:0,66,1441	0/0:20,0:20:54.10:0,54,1103	0/0:20,0:20:56.87:0,57,1360	0/0:10,0:10:30.09:0,30,724	0/0:31,0:31:77.75:0,78,1684	0/0:20,0:20:60.14:0,60,1287	0/1:13,3:16:63.68:309,0,64	0/0:20,0:19:57.01:0,57,1417	1/1:6,0:6:6:53,6,0
chr10	36632015	.	CCGCA	C	3163.45	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=11.365;DP=530;FS=2.175;HRun=0;HaplotypeScore=110.9135;InbreedingCoeff=0.9179;MQ=64.95;MQ0=1;MQRankSum=-3.378;QD=14.85;ReadPosRankSum=4.070;VQSLOD=3.1396;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:22:15.05:177,15,0	0/0:8,0:8:21.01:0,21,423	0/0:37,0:34:69.11:0,69,1373	0/0:27,0:21:18.51:0,19,732	1/1:0,13:11:18.06:306,18,0	1/1:15,0:12:3.38:166,3,0	1/1:24,0:21:5.96:60,6,0	0/0:31,0:30:63.03:0,63,1290	1/1:1,10:11:18.01:263,18,0	1/1:18,0:16:11.51:251,12,0	1/1:13,0:12:6.02:70,6,0	0/0:21,0:21:41.28:0,41,900	0/0:20,0:20:48.16:0,48,1137	0/0:18,0:17:32.84:0,33,754	1/1:23,0:20:36.09:434,36,0	1/1:6,9:13:12:175,12,0	1/1:1,19:20:27.09:465,27,0	1/1:18,0:18:39.59:491,40,0	0/0:13,0:12:26.98:0,27,541	0/0:24,0:24:51.17:0,51,1228	0/0:21,0:21:42.11:0,42,913	0/0:20,0:20:48.15:0,48,1161	0/0:10,0:10:24.08:0,24,598	0/0:29,0:29:59.64:0,60,1316	0/0:19,0:19:45.14:0,45,1038	1/1:7,8:15:30.02:421,30,0	0/0:19,0:18:51.18:0,51,1245	1/1:0,6:6:6.02:104,6,0
chr10	36632036	.	AAGAGAGAG	A	619.33	PASS	AB=0.901;AC=20;AF=0.500;AN=40;BaseQRankSum=3.297;DP=506;FS=32.995;HRun=0;HaplotypeScore=146.6353;InbreedingCoeff=0.2310;MQ=50.91;MQ0=17;MQRankSum=-2.294;QD=2.82;ReadPosRankSum=0.653;VQSLOD=1.3321;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	1/1:9,0:8:3.01:49,3,0	./.	./.	./.	1/1:14,0:10:3:56,3,0	0/0:20,0:16:1.15:0,1,3	0/0:24,0:24:0:0,0,0	1/1:9,0:12:9.50:169,10,0	0/0:18,0:12:3.44:0,3,21	./.	0/1:14,4:18:15.25:15,0,27	0/1:19,2:22:56.58:57,0,160	1/1:15,0:14:3.48:45,3,0	0/1:26,0:23:13.53:59,0,14	1/1:9,0:10:12.04:223,12,0	1/1:21,0:20:3.01:56,3,0	0/0:19,0:18:4.04:0,4,16	0/0:16,0:15:2.98:0,3,21	0/1:25,0:27:0.01:0,0,0	./.	0/0:20,0:19:6.01:0,6,66	./.	0/0:28,0:26:8.49:0,8,121	1/1:19,0:19:0.47:1,0,0	0/0:16,0:14:0.47:0,0,1	1/1:20,2:20:2.22:7,2,0	./.
chr10	36633862	.	T	TACC	144.56	PASS	AB=0.565;AC=1;AF=0.022;AN=46;BaseQRankSum=3.194;DP=542;FS=2.052;HRun=0;HaplotypeScore=78.1998;InbreedingCoeff=-0.0301;MQ=71.45;MQ0=9;MQRankSum=-2.643;QD=11.12;ReadPosRankSum=-1.438;VQSLOD=3.1622;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	0/0:8,0:8:21.07:0,21,358	0/0:32,0:31:87.25:0,87,1361	0/0:25,0:25:72.24:0,72,1121	0/0:26,0:26:72.25:0,72,1228	./.	./.	0/0:39,0:38:99:0,108,1686	0/0:29,0:29:84.29:0,84,1428	0/1:3,9:8:33.03:218,0,33	0/0:5,3:2:3.01:0,3,48	0/0:26,0:26:78.25:0,78,1300	0/0:10,0:10:24.08:0,24,409	0/0:23,0:23:66.21:0,66,1095	./.	0/0:30,0:30:90.31:0,90,1531	0/0:18,0:18:54.18:0,54,921	./.	0/0:22,0:22:60.21:0,60,1021	0/0:19,0:19:57.18:0,57,942	0/0:32,0:32:90.29:0,90,1508	0/0:23,0:23:66.23:0,66,1125	0/0:19,0:18:54.18:0,54,921	0/0:19,0:19:54.12:0,54,862	0/0:28,0:28:84.29:0,84,1428	0/0:27,0:27:75.25:0,75,1249	0/0:31,0:30:90.26:0,90,1500	0/0:5,0:5:15.05:0,15,256
chr10	36633965	.	ACG	A	1702.29	PASS	AB=0.965;AC=37;AF=0.771;AN=48;BaseQRankSum=-1.027;DP=384;FS=17.513;HRun=0;HaplotypeScore=112.7464;InbreedingCoeff=-0.2792;MQ=53.78;MQ0=9;MQRankSum=1.450;QD=4.72;ReadPosRankSum=1.095;VQSLOD=1.8728;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	1/1:5,1:5:2.98:21,3,0	./.	0/1:7,0:6:6.89:7,0,13	0/1:18,0:14:0:0,0,0	1/1:10,0:8:2.84:14,3,0	./.	0/1:30,0:26:6.08:350,0,6	0/1:17,0:17:35.77:36,0,63	1/1:7,0:5:3.61:24,4,0	./.	0/1:19,2:21:7.12:142,0,7	0/1:12,3:15:23.01:122,0,23	1/1:19,1:20:2.99:23,3,0	1/1:8,0:7:2.98:22,3,0	1/1:11,0:11:5.65:37,6,0	1/1:9,0:9:2.95:24,3,0	1/1:5,0:4:2.84:14,3,0	0/1:14,0:10:67.31:67,0,67	0/1:23,2:22:0.40:212,0,0	1/1:30,1:28:2.33:22,2,0	0/1:15,0:12:22.38:56,0,22	1/1:15,0:14:13.92:92,14,0	0/1:29,2:29:28.64:165,0,29	1/1:19,1:20:19.21:154,19,0	1/1:12,0:12:27.10:141,27,0	0/1:11,0:11:33.40:61,0,33	1/1:3,0:3:3.37:17,3,0
chr10	36633966	.	CGT	C	823.27	PASS	AB=0.974;AC=35;AF=0.729;AN=48;BaseQRankSum=1.366;DP=369;FS=1.736;HRun=0;HaplotypeScore=116.6349;InbreedingCoeff=0.1451;MQ=54.67;MQ0=9;MQRankSum=3.513;QD=2.65;ReadPosRankSum=-0.682;VQSLOD=1.8977;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	1/1:6,0:5:1.25:3,1,0	./.	0/1:7,0:6:6.96:7,0,12	0/1:14,4:14:0:0,0,0	1/1:5,2:5:3:28,3,0	./.	0/1:28,0:25:10.19:10,0,116	1/1:13,2:16:4.69:138,5,0	1/1:5,0:5:7.68:40,8,0	./.	0/1:21,0:21:28.45:28,0,34	0/1:15,0:15:27.49:27,0,67	1/1:20,0:20:0.87:2,1,0	1/1:4,3:6:3.01:39,3,0	1/1:8,1:10:5.78:68,6,0	1/1:7,2:9:5.95:65,6,0	1/1:5,0:4:2.94:18,3,0	0/0:14,0:10:12.23:0,12,179	0/1:26,0:23:6.71:7,0,70	1/1:30,0:27:0.23:1,0,0	0/0:14,0:12:4.19:0,4,79	1/1:14,0:13:3.60:33,4,0	0/1:31,0:29:19.16:19,0,139	1/1:20,0:20:11.66:70,12,0	1/1:10,1:12:30.48:292,30,0	0/0:11,0:11:10.57:0,11,110	1/1:2,1:3:8.04:63,8,0
chr10	36633970	.	CGT	C	634.67	PASS	AB=0.964;AC=24;AF=0.500;AN=48;BaseQRankSum=3.935;DP=369;FS=14.845;HRun=0;HaplotypeScore=118.0134;InbreedingCoeff=0.5561;MQ=55.39;MQ0=6;MQRankSum=-1.599;QD=4.92;ReadPosRankSum=1.279;VQSLOD=2.2418;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	0/0:6,0:5:3.01:0,3,44	./.	0/1:7,0:6:4.23:4,0,18	1/1:15,3:14:2.83:22,3,0	1/1:5,2:5:3:29,3,0	./.	0/0:34,0:31:51.37:0,51,518	1/1:15,0:15:1.67:118,2,0	1/1:6,0:5:8.99:43,9,0	./.	0/0:20,0:20:10.89:0,11,206	0/0:13,0:13:14.62:0,15,175	0/0:20,0:20:3.01:0,3,44	1/1:5,2:6:3.01:39,3,0	1/1:11,0:11:7.34:74,7,0	1/1:7,2:9:3.85:45,4,0	1/1:5,0:4:2.94:18,3,0	0/0:14,0:11:19.92:0,20,362	0/0:23,0:22:12.37:0,12,199	0/0:33,0:31:3.27:0,3,45	0/0:16,0:14:14.25:0,14,248	0/1:12,1:13:0.34:19,0,0	0/0:29,0:27:24.58:0,25,343	1/1:17,0:17:0.50:1,0,0	1/1:11,1:12:30.03:312,30,0	0/0:12,0:12:19.68:0,20,306	1/1:1,1:2:6.02:68,6,0
chr10	36633974	.	CGT	C	99.66	PASS	AB=1.000;AC=9;AF=0.180;AN=50;BaseQRankSum=5.694;DP=416;FS=0.947;HRun=0;HaplotypeScore=127.7593;InbreedingCoeff=0.4914;MQ=56.75;MQ0=5;MQRankSum=-4.225;QD=2.37;ReadPosRankSum=4.093;VQSLOD=2.1063;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:8,0:7:12.01:0,12,147	0/0:8,0:6:2.68:0,3,11	0/0:8,0:7:7.05:0,7,60	0/0:21,0:17:3.01:0,3,38	1/1:6,1:5:3.01:30,3,0	./.	0/0:37,0:36:45.59:0,46,716	0/0:23,0:23:17.96:0,18,324	1/1:6,0:5:14.68:117,15,0	./.	0/0:20,0:20:18.71:0,19,297	0/0:17,0:17:29.24:0,29,363	0/0:21,0:21:6.02:0,6,87	1/1:8,2:9:3.01:39,3,0	0/0:15,0:15:11.76:0,12,178	0/0:12,0:12:17.98:0,18,237	1/1:5,0:4:3:27,3,0	0/0:14,0:12:17.89:0,18,400	0/0:23,0:22:15.34:0,15,242	0/0:35,0:33:12.30:0,12,176	0/0:16,0:14:17.26:0,17,292	0/0:13,1:14:3.69:0,4,47	0/0:32,0:30:36.44:0,36,506	0/0:19,0:19:4.52:0,5,85	0/1:14,0:14:13.98:14,0,124	0/0:14,0:13:28.66:0,29,402	0/0:3,0:3:5.18:0,5,58
chr10	36634723	.	GC	G	15781.28	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=13.136;DP=839;FS=3.132;HRun=5;HaplotypeScore=84.1689;InbreedingCoeff=0.9692;MQ=59.59;MQ0=12;MQRankSum=5.627;QD=25.87;ReadPosRankSum=2.450;VQSLOD=4.5272;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,47:48:99:1190,105,0	1/1:1,15:15:42.12:476,42,0	0/0:27,0:13:27.07:0,27,340	0/0:39,0:26:62.40:0,62,777	0/0:27,0:25:72.24:0,72,976	1/1:1,19:19:36.10:408,36,0	1/1:1,21:21:54.15:612,54,0	1/1:4,28:31:5.58:820,6,0	0/0:24,0:24:51.17:0,51,697	1/1:7,35:40:26.77:1075,27,0	1/1:1,20:20:54.11:598,54,0	1/1:2,35:37:90.26:1020,90,0	1/1:1,31:32:75.10:851,75,0	1/1:1,31:32:71.29:811,71,0	1/1:0,38:31:60.13:666,60,0	0/0:23,0:23:63.19:0,63,844	0/0:41,0:41:99:0,117,1582	1/1:1,23:24:57.16:647,57,0	1/1:4,13:14:36.06:385,36,0	1/1:1,27:28:37.37:808,37,0	1/1:2,43:45:99:1327,117,0	1/1:4,25:28:66.19:748,66,0	1/1:4,27:30:78.22:884,78,0	1/1:3,31:34:75.21:851,75,0	1/1:3,30:33:9.33:856,9,0	0/0:40,2:42:58.34:0,58,1547	1/1:0,27:27:66.19:748,66,0	0/0:6,0:6:15.05:0,15,205
chr10	36634895	.	T	TCTC	2898.83	PASS	AB=0.865;AC=11;AF=0.212;AN=52;BaseQRankSum=-4.847;DP=735;FS=2.651;HRun=0;HaplotypeScore=91.3755;InbreedingCoeff=0.8729;MQ=64.74;MQ0=8;MQRankSum=-10.068;QD=16.76;ReadPosRankSum=-2.000;VQSLOD=2.9187;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,24:16:9.03:178,9,0	0/0:16,0:16:48.14:0,48,806	0/0:28,0:26:65.47:0,65,971	0/0:26,0:25:65.33:0,65,1066	0/0:23,0:23:60.05:0,60,1029	1/1:0,19:18:18.06:423,18,0	1/1:1,14:12:15.05:319,15,0	0/0:36,0:36:99:0,105,1710	0/0:33,3:35:84.27:0,84,1452	1/1:2,22:17:36.12:771,36,0	./.	0/0:31,6:34:90.29:0,90,1523	0/0:38,2:40:99:0,111,1812	0/0:30,2:32:90.24:0,90,1533	1/1:1,50:43:63.21:1370,63,0	0/0:31,10:38:93.26:0,93,1484	0/0:38,2:39:99:0,105,1723	./.	0/0:18,0:17:51.16:0,51,846	0/0:24,0:24:72.19:0,72,1227	0/0:37,0:37:99:0,102,1702	0/0:17,0:17:45.15:0,45,790	0/0:17,0:17:51.16:0,51,868	0/0:29,1:30:72.23:0,72,1236	0/0:17,0:17:51.11:0,51,776	0/1:27,5:32:6.49:6,0,1253	0/0:36,0:35:99:0,102,1726	0/0:3,0:3:9.03:0,9,151
chr10	36635688	.	A	AT	25900.23	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-8.561;DP=662;FS=1.413;HRun=1;HaplotypeScore=57.6509;InbreedingCoeff=0.9904;MQ=69.31;MQ0=0;MQRankSum=-0.975;QD=41.57;ReadPosRankSum=5.584;VQSLOD=4.8938;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,20:20:54.18:809,54,0	1/1:0,15:15:39.13:585,39,0	0/0:24,0:24:69.22:0,69,866	0/0:15,0:15:14.71:0,15,345	1/1:1,37:38:99:1498,105,0	1/1:0,23:23:69.23:1034,69,0	1/1:0,23:23:66.22:988,66,0	1/1:1,24:24:69.19:1000,69,0	1/1:1,26:27:75.25:1124,75,0	1/1:1,18:19:48.16:709,48,0	1/1:1,20:20:57.19:846,57,0	1/1:0,25:25:75.25:1124,75,0	1/1:1,20:21:60.20:899,60,0	1/1:1,15:16:42.14:630,42,0	1/1:1,32:33:84.28:1259,84,0	1/1:1,24:25:69.23:1034,69,0	1/1:1,23:24:69.23:1034,69,0	1/1:0,25:24:69.23:1034,69,0	1/1:2,25:27:78.26:1165,78,0	1/1:0,35:35:99:1574,105,0	1/1:0,12:12:33.11:495,33,0	1/1:0,19:19:51.13:739,51,0	1/1:1,20:21:54.18:809,54,0	1/1:1,21:22:63.21:944,63,0	1/1:2,28:30:78.26:1169,78,0	1/1:0,41:41:99:1823,123,0	1/1:1,26:27:78.26:1169,78,0	1/1:0,9:9:27.09:405,27,0
chr10	36636581	.	ATAAG	A	6053.91	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=13.894;DP=708;FS=10.089;HRun=0;HaplotypeScore=115.2619;InbreedingCoeff=0.9699;MQ=68.68;MQ0=0;MQRankSum=-3.171;QD=46.21;ReadPosRankSum=3.102;VQSLOD=5.4916;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:63.19:0,63,1605	0/0:8,0:8:21.07:0,21,467	0/0:24,0:24:72.25:0,72,1809	0/0:13,0:13:33.03:0,33,690	1/1:1,28:29:84.29:1505,84,0	0/0:24,0:24:66.23:0,66,1743	0/0:20,0:20:60.19:0,60,1382	0/0:33,0:33:87.29:0,87,2131	1/1:2,18:20:51.17:938,51,0	0/0:46,0:46:99:0,132,3463	0/0:40,0:40:99:0,114,2789	0/0:32,0:32:93.32:0,93,2427	0/0:22,0:22:63.19:0,63,1588	0/0:31,0:31:90.27:0,90,2217	0/0:26,0:26:75.26:0,75,1922	1/1:0,24:24:63.22:1159,63,0	1/1:2,20:22:45.15:828,45,0	0/0:32,0:32:96.29:0,96,2367	0/0:21,0:21:51.18:0,51,1347	0/0:40,0:40:99:0,114,2981	0/0:17,0:17:45.15:0,45,1120	0/0:27,0:27:81.27:0,81,2049	0/0:17,0:17:48.16:0,48,1226	0/0:22,0:22:63.22:0,63,1644	0/0:24,0:24:69.24:0,69,1822	1/1:3,28:31:4.99:1348,5,0	0/0:37,0:37:99:0,102,2690	1/1:0,5:5:15.05:276,15,0
chr10	36640347	.	CAAAA	C	3953.60	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-0.108;DP=558;FS=9.071;HRun=15;HaplotypeScore=102.8780;InbreedingCoeff=0.9364;MQ=47.11;MQ0=9;MQRankSum=4.746;QD=24.87;ReadPosRankSum=8.588;VQSLOD=1.6615;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,22:26:42.22:659,42,0	0/0:6,0:8:12.04:0,12,206	0/0:9,0:2:6.02:0,6,98	0/0:3,0:1:3.01:0,3,31	0/0:21,0:25:55.69:0,56,873	1/1:4,14:16:30.02:388,30,0	1/1:6,18:25:44.87:525,45,0	0/0:16,0:29:78.14:0,78,1257	0/0:5,0:7:20.01:0,20,288	1/1:6,19:26:53.94:725,54,0	1/1:5,14:19:26.81:344,27,0	0/0:8,0:22:28.03:0,28,465	0/0:12,0:21:24.47:0,24,345	0/0:8,0:18:24.51:0,25,380	1/1:3,17:19:48.08:618,48,0	0/0:5,0:17:18.06:0,18,300	0/0:18,0:23:51.32:0,51,746	1/1:3,19:22:51.11:695,51,0	0/0:15,0:20:51.15:0,51,884	0/0:24,0:31:81.17:0,81,1306	0/0:7,0:11:23.98:0,24,383	0/0:11,0:17:39.09:0,39,662	0/0:11,0:16:33.44:0,33,500	0/0:8,0:16:15.43:0,15,182	0/0:20,0:28:69:0,69,990	0/0:12,1:28:19.12:0,19,688	0/0:18,0:37:63.10:0,63,907	0/0:7,0:6:18.06:0,18,341
chr10	36642396	.	T	TC	6366.52	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-14.480;DP=654;FS=1.929;HRun=4;HaplotypeScore=69.2113;InbreedingCoeff=0.9975;MQ=77.91;MQ0=0;MQRankSum=-1.945;QD=34.98;ReadPosRankSum=1.517;VQSLOD=5.4191;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,24:31:87.24:1141,87,0	0/0:13,0:13:39.09:0,39,429	0/0:17,0:17:37.50:0,38,371	0/0:21,0:21:48.19:0,48,519	0/0:20,0:20:54.15:0,54,613	1/1:1,23:24:66.22:902,66,0	1/1:1,18:19:54.18:739,54,0	0/0:21,0:21:57.16:0,57,646	0/0:35,0:35:96.27:0,96,1088	1/1:1,25:26:72.22:967,72,0	1/1:0,25:25:60.20:812,60,0	0/0:25,0:25:60.17:0,60,680	0/0:24,0:24:69.20:0,69,783	0/0:23,0:23:69.20:0,69,782	1/1:4,30:34:72.24:985,72,0	0/0:31,0:31:84.22:0,84,943	0/0:23,0:23:66.17:0,66,738	1/1:1,22:23:60.20:821,60,0	0/0:17,0:17:45.10:0,45,488	0/0:27,0:27:81.20:0,81,905	0/0:30,0:30:90.24:0,90,1009	0/0:17,0:17:45.06:0,45,494	0/0:24,0:24:60.17:0,60,680	0/0:25,0:25:69.15:0,69,768	0/0:24,0:24:66.07:0,66,747	0/0:19,1:20:16.11:0,16,572	0/0:26,0:26:72.20:0,72,816	0/0:9,0:9:27.08:0,27,306
chr10	36643925	.	TACACACACACAC	T	818.73	PASS	AB=1.000;AC=16;AF=0.348;AN=46;BaseQRankSum=2.229;DP=547;FS=5.412;HRun=0;HaplotypeScore=177.2701;InbreedingCoeff=0.5721;MQ=59.94;MQ0=14;MQRankSum=-1.906;QD=4.01;ReadPosRankSum=1.126;VQSLOD=2.4848;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:20.91:0,21,757	./.	./.	./.	0/0:13,0:13:9.01:0,9,328	0/0:19,0:19:23.23:0,23,1058	0/0:23,0:23:24.97:0,25,1033	0/0:30,0:28:4.07:0,4,12	0/0:14,0:13:12.04:0,12,588	0/0:16,0:16:18.06:0,18,926	0/0:6,0:6:3.01:0,3,170	0/1:18,0:18:0:0,0,0	1/1:29,1:32:7.39:299,7,0	1/1:18,2:20:2.96:101,3,0	0/0:18,0:18:24.08:0,24,1270	0/0:21,0:22:24.55:0,25,907	0/0:23,0:23:31.35:0,31,1636	0/0:9,0:9:9.03:0,9,426	1/1:18,3:21:5.83:125,6,0	1/1:15,0:15:3.01:49,3,0	1/1:34,0:33:9.03:178,9,0	./.	./.	1/1:27,0:31:3.01:42,3,0	0/1:16,0:14:35.99:69,0,36	0/0:20,0:19:30.10:0,30,1338	1/1:12,2:14:3.01:102,3,0	0/0:3,0:3:3.01:0,3,107
chr10	36649578	.	GACATT	G	5451.84	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=7.132;DP=633;FS=0.000;HRun=0;HaplotypeScore=162.5717;InbreedingCoeff=0.9742;MQ=70.28;MQ0=5;MQRankSum=0.581;QD=35.87;ReadPosRankSum=3.523;VQSLOD=4.4132;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:37,4:41:78.15:1374,78,0	0/0:4,0:4:12.04:0,12,268	0/0:37,0:19:50.91:0,51,1036	0/0:51,0:29:65.03:0,65,1357	0/0:26,0:26:63.49:0,63,1228	1/1:20,1:21:48.09:799,48,0	1/1:15,1:14:36.11:678,36,0	0/0:25,0:25:54.15:0,54,1108	0/0:18,0:18:50.57:0,51,886	1/1:1,23:24:66.05:1098,66,0	1/1:1,11:12:6.02:112,6,0	0/0:23,0:23:67.94:0,68,939	0/0:21,0:20:56.54:0,57,950	0/0:23,0:23:57.24:0,57,1166	1/1:16,6:22:51.11:876,51,0	0/0:29,0:29:71.41:0,71,1267	0/0:15,0:15:44.45:0,44,683	1/1:14,2:12:30:514,30,0	0/0:17,0:17:45.05:0,45,903	0/0:17,0:17:51.03:0,51,1080	0/0:40,0:40:99:0,99,1761	0/0:16,0:16:47.89:0,48,886	0/0:16,0:16:47.91:0,48,795	0/0:30,0:29:55.27:0,55,1061	0/0:17,0:17:38.90:0,39,634	0/0:23,0:23:56.99:0,57,985	0/0:26,0:26:54.33:0,54,1153	0/0:7,0:7:20.69:0,21,332
chr10	36649592	.	CT	C	2627.38	PASS	AB=0.721;AC=11;AF=0.196;AN=56;BaseQRankSum=8.834;DP=631;FS=1.701;HRun=1;HaplotypeScore=136.2000;InbreedingCoeff=0.6304;MQ=60.98;MQ0=17;MQRankSum=0.707;QD=17.52;ReadPosRankSum=4.872;VQSLOD=4.1820;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:13,29:42:23.06:771,0,23	0/0:5,0:5:12.03:0,12,168	0/0:41,0:17:45.55:0,46,638	0/0:55,0:24:71.91:0,72,1006	0/0:20,0:20:45.15:0,45,715	1/1:2,14:16:32.80:441,33,0	1/1:7,13:18:6.36:365,6,0	0/0:21,0:20:52.21:0,52,732	0/0:18,0:18:45.08:0,45,614	0/1:25,0:25:34.31:477,0,34	1/1:12,0:12:5.51:49,6,0	0/0:21,1:20:60.06:0,60,720	0/0:21,0:20:48.55:0,49,638	0/0:28,0:26:60.13:0,60,838	1/1:11,8:19:38.55:419,39,0	0/0:30,0:30:69.59:0,70,926	0/0:16,1:17:38.85:0,39,500	0/1:4,12:11:5.16:267,0,5	0/0:12,0:12:36.11:0,36,553	0/0:22,0:20:42.14:0,42,664	0/0:40,0:39:63.69:0,64,1002	0/0:18,0:18:33.10:0,33,501	0/0:15,0:15:33.04:0,33,450	0/0:33,1:32:47.70:0,48,703	0/0:12,0:12:21.06:0,21,313	0/0:18,0:18:42.99:0,43,602	0/0:24,0:24:55.82:0,56,764	0/0:8,0:7:21.03:0,21,266
chr10	36649593	.	TACACACAC	T	3134.27	PASS	AB=0.900;AC=38;AF=0.792;AN=48;BaseQRankSum=0.478;DP=626;FS=3.168;HRun=0;HaplotypeScore=192.4170;InbreedingCoeff=0.2200;MQ=60.69;MQ0=19;MQRankSum=-2.674;QD=6.17;ReadPosRankSum=-2.242;VQSLOD=2.4850;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:40,1:43:5.32:58,5,0	./.	0/1:41,0:17:0:0,0,0	./.	1/1:15,5:20:0.46:1,0,0	0/0:15,0:16:1.55:0,2,4	1/1:19,0:18:5.38:59,5,0	0/1:21,0:20:0:0,0,0	1/1:8,9:17:9.02:224,9,0	0/1:21,2:24:22.75:246,0,23	1/1:10,1:12:3.01:46,3,0	0/1:17,0:20:16.48:229,0,16	1/1:15,0:19:10.87:186,11,0	1/1:18,1:25:11.83:194,12,0	1/1:13,0:19:17.13:260,17,0	1/1:17,9:30:24.04:467,24,0	1/1:12,3:16:12.04:268,12,0	1/1:14,0:11:4.29:59,4,0	1/1:13,0:13:3.01:56,3,0	0/1:18,0:20:0:0,0,0	1/1:37,0:40:2.98:21,3,0	./.	0/0:9,2:13:2.99:0,3,24	0/1:28,1:32:9.17:9,0,93	./.	1/1:11,8:18:21.07:437,21,0	1/1:15,0:23:12.04:221,12,0	1/1:6,2:7:9.03:205,9,0
chr10	36649940	.	GCTCTCT	G	2909.87	PASS	AB=0.811;AC=30;AF=0.625;AN=48;BaseQRankSum=-2.106;DP=482;FS=0.898;HRun=0;HaplotypeScore=107.2215;InbreedingCoeff=0.5670;MQ=71.66;MQ0=14;MQRankSum=2.653;QD=11.64;ReadPosRankSum=1.969;VQSLOD=1.9067;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:26:30.10:0,30,735	./.	./.	0/0:39,0:29:0.47:0,0,1	./.	0/0:29,0:29:24.08:0,24,562	0/0:16,0:15:12.02:0,12,227	1/1:37,0:36:5.98:55,6,0	1/1:8,0:9:11.94:114,12,0	0/0:20,0:20:26.12:0,26,523	0/0:13,0:12:6.02:0,6,150	1/1:11,0:13:6.02:103,6,0	1/1:13,0:14:27.09:530,27,0	1/1:9,0:11:9.03:168,9,0	0/0:17,0:17:0.47:0,0,1	1/1:9,0:10:14.93:173,15,0	1/1:14,0:14:14.90:144,15,0	0/0:10,0:9:6.02:0,6,147	1/1:14,0:14:2.97:21,3,0	0/1:8,0:8:14.47:85,0,14	1/1:24,0:23:9.02:138,9,0	1/1:12,0:12:12.04:242,12,0	1/1:13,0:13:15:176,15,0	./.	1/1:9,0:11:3.01:60,3,0	0/1:9,14:22:17.72:697,0,18	1/1:20,0:21:21.01:328,21,0	1/1:11,0:7:5.91:38,6,0
chr10	36649981	.	CTGTGTG	C	2761	PASS	AB=0.939;AC=33;AF=0.660;AN=50;BaseQRankSum=-1.456;DP=482;FS=19.194;HRun=0;HaplotypeScore=126.1845;InbreedingCoeff=0.4301;MQ=43.95;MQ0=22;MQRankSum=2.512;QD=8.19;ReadPosRankSum=-0.459;VQSLOD=1.2324;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:23:17.07:221,0,17	1/1:2,0:5:2.76:20,3,0	./.	./.	0/0:29,0:28:15.04:0,15,294	1/1:25,1:27:21:383,21,0	1/1:19,0:19:7.98:170,8,0	./.	0/0:17,0:17:18.06:0,18,372	1/1:15,0:15:15.01:292,15,0	1/1:13,0:11:12.04:239,12,0	1/1:10,0:10:5.59:119,6,0	1/1:17,5:21:3:25,3,0	1/1:18,0:18:14.34:113,14,0	1/1:13,0:14:14.63:241,15,0	0/0:19,0:19:13.59:0,14,229	0/0:15,0:14:17.36:0,17,238	1/1:12,0:11:14.88:251,15,0	1/1:19,4:21:11.55:229,12,0	0/0:7,0:11:3.01:0,3,60	0/1:28,0:24:49.84:214,0,50	0/1:17,0:15:4.14:168,0,4	0/1:9,7:15:0:0,0,0	1/1:18,0:19:5.84:111,6,0	1/1:14,0:12:3.01:60,3,0	0/0:33,0:32:32.13:0,32,501	1/1:10,0:17:3.01:50,3,0	0/1:12,0:11:20.85:21,0,56
chr10	36650467	.	A	AG	4396.18	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=1.265;DP=492;FS=4.827;HRun=0;HaplotypeScore=58.0281;InbreedingCoeff=0.9932;MQ=62.61;MQ0=1;MQRankSum=-1.136;QD=35.74;ReadPosRankSum=4.277;VQSLOD=4.5188;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,15:15:39.13:530,39,0	0/0:15,0:15:45.14:0,45,611	0/0:10,0:6:17.45:0,17,155	0/0:10,0:8:18.03:0,18,199	0/0:28,0:28:84.20:0,84,1082	1/1:0,19:19:48.16:654,48,0	1/1:1,14:15:42.12:572,42,0	0/0:30,0:30:84.22:0,84,1095	0/0:16,0:16:48.11:0,48,627	1/1:1,22:23:66.17:853,66,0	1/1:0,19:19:54.09:706,54,0	0/0:9,0:9:24.06:0,24,304	0/0:17,0:17:48.13:0,48,607	0/0:11,0:11:33.07:0,33,398	1/1:0,13:13:36.12:490,36,0	0/0:13,0:13:33.05:0,33,394	0/0:16,0:16:48.11:0,48,644	1/1:2,17:19:28.19:591,28,0	0/0:30,0:30:90.22:0,90,1176	0/0:23,0:23:69.19:0,69,893	0/0:14,0:14:33.87:0,34,449	0/0:19,0:19:48.90:0,49,708	0/0:17,0:17:51.15:0,51,663	0/0:5,0:5:15.04:0,15,193	0/0:20,0:20:55.52:0,56,704	0/0:25,1:26:37.20:0,37,842	0/0:23,0:20:66.15:0,66,807	0/0:17,0:17:51.09:0,51,610
chr10	36651779	.	AC	A	2681.11	PASS	AB=0.941;AC=21;AF=0.375;AN=56;BaseQRankSum=-0.335;DP=464;FS=2.423;HRun=10;HaplotypeScore=58.3792;InbreedingCoeff=0.7920;MQ=81.30;MQ0=0;MQRankSum=-2.254;QD=13.96;ReadPosRankSum=1.478;VQSLOD=3.7983;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:30,2:32:17.19:17,0,400	1/1:0,4:4:12:104,12,0	0/0:19,1:19:4.33:0,4,309	0/0:12,0:12:13.66:0,14,156	0/0:0,0:1:2.84:0,3,14	0/0:16,2:18:13.06:0,13,372	0/0:29,1:30:46.08:0,46,699	1/1:12,19:31:47.95:417,48,0	0/0:6,0:19:26.21:0,26,187	0/0:13,0:13:27.06:0,27,291	0/0:5,0:5:12.02:0,12,125	0/0:17,0:17:33.01:0,33,338	1/1:2,17:19:36.03:424,36,0	1/1:5,15:20:44.92:382,45,0	0/0:31,1:32:41.62:0,42,636	0/0:21,1:22:31.10:0,31,549	0/0:18,0:25:63.84:0,64,425	0/0:10,0:10:24.06:0,24,265	1/1:5,11:16:32.92:275,33,0	1/1:0,4:4:8.99:78,9,0	1/1:13,33:46:37.43:722,37,0	1/1:0,1:1:3:26,3,0	0/0:4,0:4:9.02:0,9,99	0/0:33,2:35:23.07:0,23,687	1/1:0,7:7:21:182,21,0	0/0:4,0:8:11.70:0,12,95	1/1:3,9:12:29.99:260,30,0	0/0:1,0:1:2.98:0,3,22
chr10	36651967	.	GT	G	2918.21	PASS	AB=0.933;AC=35;AF=0.625;AN=56;BaseQRankSum=-9.489;DP=289;FS=1.075;HRun=3;HaplotypeScore=42.6966;InbreedingCoeff=-0.1240;MQ=78.12;MQ0=1;MQRankSum=0.150;QD=10.97;ReadPosRankSum=-4.640;VQSLOD=-0.2181;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,19:19:21.06:253,21,0	0/1:4,0:4:2.63:21,0,3	0/0:16,0:12:23.15:0,23,222	0/1:11,0:10:11.57:12,0,141	1/1:10,4:14:12.25:279,12,0	1/1:6,1:7:0.70:92,1,0	0/1:28,1:29:99:188,0,104	1/1:11,1:12:32.70:252,33,0	0/1:8,1:9:5.89:66,0,6	1/1:1,6:7:17.89:207,18,0	1/1:0,9:9:17.97:188,18,0	0/1:12,0:12:26.52:95,0,27	0/1:7,2:9:18.35:77,0,18	0/1:7,0:7:7.03:41,0,7	1/1:2,11:13:23.99:274,24,0	0/1:6,0:6:6.38:44,0,6	0/1:17,3:20:12.70:235,0,13	0/1:11,4:15:15.80:184,0,16	1/1:11,0:11:11.44:136,11,0	1/1:4,0:4:2.78:64,3,0	1/1:13,1:13:12.14:199,12,0	0/0:1,0:1:2.68:0,3,11	0/1:4,2:6:7.67:29,0,8	0/1:10,0:10:5.82:6,0,36	0/0:6,0:6:7.35:0,7,26	0/1:4,0:4:2.77:31,0,3	0/1:8,1:9:15.08:67,0,15	0/1:5,0:5:3.51:38,0,4
chr10	36652410	.	G	GGAGA	2531.81	PASS	AB=0.986;AC=45;AF=0.938;AN=48;BaseQRankSum=-1.405;DP=608;FS=9.112;HRun=0;HaplotypeScore=130.8730;InbreedingCoeff=0.0579;MQ=60.16;MQ0=9;MQRankSum=1.138;QD=4.80;ReadPosRankSum=0.769;VQSLOD=1.9008;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:34,0:33:14.58:137,15,0	1/1:5,0:5:6.01:88,6,0	./.	0/1:60,0:31:0:0,0,0	./.	1/1:20,0:19:5.98:49,6,0	1/1:19,0:19:9.93:89,10,0	1/1:25,0:25:9.15:47,9,0	1/1:21,0:21:2.40:41,2,0	1/1:31,0:29:11.23:127,11,0	1/1:13,0:12:3:25,3,0	0/1:24,0:24:4.12:4,0,9	1/1:15,0:15:16.37:240,16,0	1/1:26,0:26:14.09:137,14,0	1/1:25,0:25:15.49:184,15,0	1/1:15,0:23:8.17:155,8,0	0/1:21,0:21:13.61:360,0,14	1/1:12,0:12:17.25:217,17,0	1/1:18,0:16:10.77:94,11,0	1/1:10,0:10:2.70:47,3,0	1/1:19,0:19:3:25,3,0	./.	./.	1/1:25,11:36:6.02:141,6,0	1/1:18,0:17:5.27:49,5,0	1/1:17,0:17:16.24:175,16,0	1/1:13,9:23:3.01:71,3,0	1/1:12,0:11:12.47:125,12,0
chr10	36652492	.	GA	G	4771.23	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=1.281;DP=587;FS=14.004;HRun=1;HaplotypeScore=79.2570;InbreedingCoeff=0.9881;MQ=68.72;MQ0=1;MQRankSum=0.650;QD=36.15;ReadPosRankSum=3.761;VQSLOD=3.8369;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:32:90.26:0,90,1287	0/0:3,0:3:9.03:0,9,135	0/0:24,0:19:36.51:0,37,600	0/0:32,0:27:72.78:0,73,861	1/1:0,21:21:51.17:701,51,0	0/0:16,0:16:42.14:0,42,629	0/0:30,0:30:87.23:0,87,1245	0/0:28,0:28:75.19:0,75,973	1/1:1,17:18:54.15:726,54,0	0/0:25,0:25:68.94:0,69,951	0/0:17,0:17:42.12:0,42,592	0/0:11,0:11:33.10:0,33,472	0/0:19,0:19:54.16:0,54,751	0/0:22,0:22:45.65:0,46,797	0/0:30,0:30:90.30:0,90,1319	1/1:0,25:25:63.21:879,63,0	1/1:1,22:23:65.81:889,66,0	0/0:18,0:18:43.14:0,43,683	0/0:13,0:13:33.19:0,33,505	0/0:16,0:16:47.88:0,48,651	0/0:27,0:27:78.24:0,78,1115	0/0:21,0:21:63.15:0,63,865	0/0:11,0:11:33.08:0,33,470	0/0:26,0:26:69.19:0,69,976	0/0:13,0:13:39.12:0,39,565	1/1:1,28:29:38.08:990,38,0	0/0:20,0:20:54.16:0,54,775	1/1:0,16:16:42.14:586,42,0
chr10	36653785	.	TAAG	T	7858.49	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=14.689;DP=694;FS=3.433;HRun=0;HaplotypeScore=99.2775;InbreedingCoeff=1.0000;MQ=87.47;MQ0=0;MQRankSum=-5.602;QD=38.90;ReadPosRankSum=2.489;VQSLOD=6.1299;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,48:53:99:2008,123,0	0/0:16,0:16:48.16:0,48,1068	0/0:30,0:30:59.62:0,60,1695	0/0:22,0:22:51.11:0,51,964	0/0:18,0:18:54.19:0,54,1206	1/1:2,23:25:60.20:979,60,0	1/1:1,28:29:66.23:1077,66,0	0/0:30,0:30:81.27:0,81,1756	0/0:14,0:14:42.13:0,42,873	1/1:2,27:29:78.25:1249,78,0	1/1:1,17:18:36.12:587,36,0	0/0:17,0:17:51.18:0,51,1136	0/0:25,0:25:72.25:0,72,1608	0/0:27,0:27:69.24:0,69,1540	1/1:2,26:28:69.24:1125,69,0	0/0:30,0:30:81.26:0,81,1768	0/0:29,0:29:81.28:0,81,1809	1/1:1,19:20:51.17:833,51,0	0/0:18,0:18:42.14:0,42,938	0/0:20,0:20:60.21:0,60,1340	0/0:27,0:27:81.28:0,81,1808	0/0:21,0:21:54.19:0,54,1185	0/0:31,0:31:90.31:0,90,2010	0/0:24,0:24:69.24:0,69,1522	0/0:29,0:29:87.30:0,87,1913	0/0:30,0:30:75.26:0,75,1651	0/0:17,0:17:48.16:0,48,1069	0/0:17,0:17:51.18:0,51,1132
chr10	36654187	.	CCTGGGCTA	C	7447.77	PASS	AB=0.556;AC=13;AF=0.232;AN=56;BaseQRankSum=8.561;DP=553;FS=0.890;HRun=0;HaplotypeScore=156.7164;InbreedingCoeff=0.8772;MQ=73.51;MQ0=0;MQRankSum=-14.119;QD=53.97;ReadPosRankSum=1.999;VQSLOD=4.6093;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,25:34:57.20:1592,57,0	0/0:3,0:3:6.02:0,6,264	0/0:18,0:16:26.26:0,26,1051	0/0:12,0:11:26.93:0,27,947	0/0:16,0:16:45.15:0,45,1961	1/1:2,10:12:30.10:828,30,0	1/1:5,26:31:60.21:1676,60,0	0/0:34,0:34:75.25:0,75,3057	0/0:23,0:23:63.20:0,63,2524	1/1:1,11:12:30.10:839,30,0	1/1:2,8:10:17.99:407,18,0	0/0:18,0:18:42.14:0,42,1782	0/0:20,0:20:42.13:0,42,1734	0/0:19,0:19:51.18:0,51,2181	1/1:1,13:14:36.12:1005,36,0	0/0:18,0:18:54.16:0,54,2174	0/0:37,0:37:99:0,99,4094	0/1:5,20:25:86.87:1101,0,87	0/0:26,0:26:69.24:0,69,2863	0/0:10,0:10:30.10:0,30,1302	0/0:49,0:49:99:0,141,5718	0/0:12,0:12:36.12:0,36,1569	0/0:8,0:8:21.07:0,21,922	0/0:36,0:36:93.29:0,93,3466	0/0:20,0:20:60.18:0,60,2419	0/0:18,0:18:54.17:0,54,2010	0/0:11,0:11:33.11:0,33,1432	0/0:7,0:7:21.07:0,21,868
chr10	36654211	.	AT	A	4766.90	PASS	AB=0.897;AC=35;AF=0.625;AN=56;BaseQRankSum=-7.964;DP=549;FS=1.716;HRun=12;HaplotypeScore=108.3533;InbreedingCoeff=0.7011;MQ=71.56;MQ0=3;MQRankSum=6.552;QD=13.62;ReadPosRankSum=3.988;VQSLOD=4.9663;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:38:74.93:0,75,728	1/1:1,4:5:14.17:99,14,0	0/1:21,2:18:33.67:34,0,170	0/1:15,2:14:24.07:24,0,79	1/1:2,18:22:45.69:327,46,0	0/0:9,1:10:0.83:0,1,190	0/0:26,1:27:24.81:0,25,412	1/1:9,12:21:5.85:226,6,0	1/1:4,20:24:53.79:418,54,0	0/1:12,2:14:19.43:19,0,172	0/0:9,0:9:26.97:0,27,250	0/0:6,0:20:36.02:0,36,202	1/1:3,18:21:38.82:302,39,0	1/1:1,15:16:32.86:255,33,0	0/0:16,0:16:27.01:0,27,263	1/1:2,16:19:46.86:354,47,0	1/1:5,33:39:70.20:718,70,0	0/0:25,2:27:22.50:0,22,576	1/1:8,15:23:44.61:335,45,0	1/1:3,8:11:23.89:186,24,0	1/1:10,20:31:60.81:453,61,0	1/1:3,8:11:20.90:163,21,0	0/0:3,0:16:24.08:0,24,117	0/0:8,0:35:66.01:0,66,383	1/1:4,22:26:59.69:459,60,0	1/1:5,7:12:20.84:162,21,0	1/1:2,10:12:23.90:186,24,0	1/1:1,2:3:5.98:46,6,0
chr10	36655260	.	A	ATG	6314.93	PASS	AB=0.569;AC=13;AF=0.232;AN=56;BaseQRankSum=-14.039;DP=930;FS=4.676;HRun=0;HaplotypeScore=111.0010;InbreedingCoeff=0.8724;MQ=66.78;MQ0=10;MQRankSum=-0.780;QD=25.26;ReadPosRankSum=2.198;VQSLOD=5.8519;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:16,28:46:43.02:839,43,0	0/0:9,0:9:21.06:0,21,253	0/0:51,0:31:39.05:0,39,448	0/0:40,0:28:12.07:0,12,316	0/0:28,0:28:69.18:0,69,817	1/1:7,23:30:14.99:719,15,0	0/1:9,27:37:7.35:855,0,7	0/0:33,0:33:60.14:0,60,692	0/0:43,0:44:99:0,101,1258	1/1:8,28:36:51.07:1259,51,0	1/1:2,13:15:3.35:361,3,0	0/0:33,0:34:87.08:0,87,1014	0/0:33,0:34:87.08:0,87,1010	0/0:30,0:30:53.97:0,54,615	1/1:11,35:47:21.90:1504,22,0	0/0:42,0:44:99:0,102,1161	0/0:44,0:45:99:0,108,1219	1/1:14,23:38:51.12:777,51,0	0/0:19,0:19:38.95:0,39,447	0/0:23,0:23:63.19:0,63,760	0/0:50,0:50:99:0,117,1397	0/0:29,0:29:57.44:0,57,763	0/0:21,0:21:51.16:0,51,615	0/0:35,0:37:92.89:0,93,1036	0/0:25,0:25:69.20:0,69,820	0/0:27,0:27:51.15:0,51,615	0/0:35,0:38:83.90:0,84,955	0/0:19,0:19:29.99:0,30,362
chr10	36659841	.	TAG	T	7441.23	PASS	AB=0.875;AC=15;AF=0.268;AN=56;BaseQRankSum=14.362;DP=759;FS=16.511;HRun=0;HaplotypeScore=89.3571;InbreedingCoeff=0.9083;MQ=89.47;MQ0=0;MQRankSum=-1.669;QD=33.67;ReadPosRankSum=3.570;VQSLOD=6.2461;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,47:48:99:1805,126,0	0/0:17,0:17:51.17:0,51,935	0/0:29,0:29:78.26:0,78,1363	0/0:28,0:28:70.76:0,71,1170	0/0:29,0:29:81.22:0,81,1381	1/1:1,25:25:66.22:946,66,0	1/1:1,24:25:60.20:860,60,0	0/0:32,0:32:84.27:0,84,1476	0/0:16,0:16:42.13:0,42,739	1/1:0,24:24:72.24:1031,72,0	1/1:0,27:27:81.27:1161,81,0	0/0:31,0:31:93.32:0,93,1704	0/0:34,0:34:99:0,99,1783	0/0:34,0:34:99:0,99,1799	1/1:1,23:24:60.20:860,60,0	0/0:32,0:32:93.30:0,93,1662	0/0:35,0:35:99:0,105,1924	1/1:0,19:19:48.16:688,48,0	0/0:15,0:15:45.15:0,45,824	0/0:29,0:29:84.29:0,84,1539	0/0:37,0:37:99:0,108,1980	0/0:19,0:19:54.17:0,54,958	0/0:22,0:22:66.23:0,66,1209	0/0:20,0:20:60.21:0,60,1100	0/0:29,0:29:87.30:0,87,1595	0/1:24,4:28:90.74:91,0,1153	0/0:43,0:43:99:0,129,2336	0/0:7,0:7:21.07:0,21,373
chr10	36662078	.	A	AG	6671.54	PASS	AB=0.913;AC=15;AF=0.268;AN=56;BaseQRankSum=-5.725;DP=603;FS=38.446;HRun=1;HaplotypeScore=95.7159;InbreedingCoeff=0.9054;MQ=83.49;MQ0=0;MQRankSum=-1.561;QD=35.87;ReadPosRankSum=3.792;VQSLOD=2.3570;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,31:38:90.30:1400,90,0	0/0:8,0:8:24.08:0,24,334	0/0:22,0:22:65.93:0,66,838	0/0:27,0:27:78.20:0,78,1024	0/0:13,0:13:18.06:0,18,249	1/1:2,18:20:45.15:718,45,0	1/1:2,22:25:60.20:947,60,0	0/0:39,0:39:99:0,111,1487	0/0:22,0:22:53.99:0,54,754	1/1:0,17:17:51.17:815,51,0	1/1:1,10:11:21.07:335,21,0	0/0:23,0:23:53.89:0,54,755	0/0:19,0:19:45.15:0,45,627	0/0:22,0:22:48.15:0,48,651	1/1:1,26:27:72.25:1149,72,0	0/0:24,0:24:60.20:0,60,837	0/0:37,0:37:93.31:0,93,1279	1/1:0,27:27:78.27:1246,78,0	0/0:17,0:17:51.15:0,51,670	0/0:18,0:18:48.16:0,48,672	0/0:30,0:30:78.26:0,78,1073	0/0:16,0:16:30.10:0,30,419	0/0:11,0:11:21.07:0,21,291	0/0:30,0:30:81.27:0,81,1132	0/0:9,0:9:24.08:0,24,335	0/1:19,2:21:61.59:62,0,621	0/0:15,0:15:33.11:0,33,448	0/0:15,0:15:45.15:0,45,629
chr10	36662118	.	G	GTTTT	10848.60	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-5.102;DP=501;FS=0.000;HRun=11;HaplotypeScore=110.8972;InbreedingCoeff=0.9708;MQ=70.59;MQ0=0;MQRankSum=-5.094;QD=22.94;ReadPosRankSum=0.915;VQSLOD=3.1367;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:12,0:40:69.67:513,70,0	1/1:0,3:11:24.04:377,24,0	0/0:10,0:9:18.03:0,18,231	0/0:18,0:18:29.01:0,29,330	1/1:0,7:9:24.08:469,24,0	1/1:14,0:21:34.05:294,34,0	1/1:9,0:23:40.35:327,40,0	1/1:14,0:31:46.16:613,46,0	1/1:7,8:16:30.57:654,31,0	1/1:4,0:10:26.44:177,26,0	1/1:3,0:12:21.54:157,22,0	1/1:1,0:16:33.02:388,33,0	1/1:3,1:19:32.88:462,33,0	1/1:6,0:23:33:372,33,0	1/1:12,0:26:51.07:402,51,0	1/1:4,14:18:33.11:741,33,0	1/1:6,21:32:55.74:1089,56,0	1/1:10,0:26:43.46:320,43,0	1/1:4,0:15:33.04:359,33,0	1/1:7,1:17:27.15:327,27,0	1/1:0,0:14:24.83:262,25,0	1/1:1,0:8:18.06:226,18,0	1/1:3,0:9:18.06:223,18,0	1/1:5,5:26:29.34:533,29,0	1/1:4,2:8:14.96:186,15,0	1/1:6,7:17:40.49:573,40,0	1/1:2,0:15:33.02:389,33,0	1/1:6,2:9:24.04:416,24,0
chr10	36662249	.	T	TTTTC	9346.20	PASS	AB=1.000;AC=36;AF=0.643;AN=56;BaseQRankSum=-10.637;DP=488;FS=6.766;HRun=0;HaplotypeScore=112.6766;InbreedingCoeff=-0.2486;MQ=60.04;MQ0=2;MQRankSum=-1.315;QD=20.01;ReadPosRankSum=0.121;VQSLOD=4.0729;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:41,0:41:99:324,0,242	1/1:5,3:8:21.05:401,21,0	0/0:13,0:10:29.92:0,30,257	0/0:8,0:6:14.94:0,15,124	0/1:20,0:20:78.07:78,0,202	0/1:25,0:25:53.24:271,0,53	0/1:20,0:20:30.13:270,0,30	1/1:27,0:25:62.39:496,62,0	0/1:14,0:14:54.03:135,0,54	0/1:15,0:15:99:122,0,122	0/1:13,0:13:89.82:132,0,90	0/1:11,0:11:45.06:45,0,112	1/1:8,8:16:42.09:862,42,0	1/1:8,7:15:27.08:626,27,0	0/1:22,0:20:74.12:74,0,217	0/1:15,0:15:86:86,0,165	0/1:27,0:27:99:184,0,200	0/1:25,0:25:99:113,0,309	1/1:10,0:10:23.35:304,23,0	1/1:7,7:14:39.05:696,39,0	1/1:5,5:10:27.02:541,27,0	1/1:7,5:12:33:561,33,0	0/1:16,0:16:99:108,0,111	0/1:13,0:13:99:143,0,100	1/1:14,10:24:63.11:1153,63,0	0/1:11,0:11:68.15:115,0,68	1/1:12,11:23:63.11:1316,63,0	0/1:20,0:20:99:191,0,129
chr10	36662302	.	CT	C	8288.63	PASS	AB=0.929;AC=53;AF=0.946;AN=56;BaseQRankSum=-1.776;DP=446;FS=10.102;HRun=10;HaplotypeScore=126.1800;InbreedingCoeff=0.6506;MQ=59.98;MQ0=3;MQRankSum=-3.145;QD=19.69;ReadPosRankSum=4.747;VQSLOD=4.0033;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,19:21:53.98:468,54,0	1/1:1,5:6:17.99:155,18,0	0/0:22,1:10:20.09:0,20,213	0/1:12,0:7:9.11:9,0,26	1/1:2,25:27:56.96:495,57,0	1/1:1,10:11:26.99:234,27,0	1/1:1,13:14:35.99:312,36,0	1/1:7,17:22:17.79:383,18,0	1/1:1,10:11:29.99:260,30,0	1/1:4,16:19:44.99:390,45,0	1/1:2,14:16:41.99:365,42,0	1/1:5,9:14:26.98:234,27,0	1/1:3,11:14:32.99:291,33,0	1/1:3,10:13:29.99:260,30,0	1/1:3,18:20:26.81:463,27,0	1/1:3,12:15:38.99:338,39,0	1/1:3,19:22:52.90:448,53,0	1/1:5,13:18:16.36:313,16,0	1/1:2,10:13:38.03:317,38,0	1/1:6,12:18:32.96:289,33,0	1/1:6,6:12:14.98:130,15,0	1/1:3,4:7:11.99:104,12,0	1/1:3,12:15:35.99:312,36,0	1/1:0,6:6:18:156,18,0	1/1:2,21:23:62.99:549,63,0	1/1:3,7:10:20.99:182,21,0	1/1:3,22:25:65.97:571,66,0	1/1:2,10:12:29.98:257,30,0
chr10	36662342	.	T	TGG	9634.61	PASS	AB=0.764;AC=30;AF=0.536;AN=56;BaseQRankSum=3.140;DP=518;FS=6.584;HRun=1;HaplotypeScore=162.9221;InbreedingCoeff=0.8496;MQ=57.85;MQ0=14;MQRankSum=-9.575;QD=38.23;ReadPosRankSum=6.015;VQSLOD=4.9001;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:24,1:25:63.09:824,63,0	0/0:9,0:9:24.05:0,24,324	0/0:55,0:17:42.62:0,43,497	0/0:47,0:18:18.41:0,18,192	1/1:5,22:29:69.23:1147,69,0	1/1:17,1:18:51.17:697,51,0	1/1:6,1:6:18.06:272,18,0	0/0:26,0:25:72.24:0,72,1131	1/1:1,12:13:36.12:633,36,0	1/1:16,2:18:54.18:770,54,0	1/1:16,1:17:48.13:669,48,0	0/1:3,0:9:14.11:166,0,14	0/0:16,0:14:39.13:0,39,592	0/0:16,0:15:34.88:0,35,461	1/1:18,0:19:54.18:733,54,0	1/1:0,15:15:45.15:772,45,0	1/1:8,13:23:48.72:813,49,0	0/1:12,1:13:45.93:393,0,46	0/0:22,0:20:59.93:0,60,871	0/0:19,0:19:49.32:0,49,679	0/0:9,0:7:18.06:0,18,257	0/0:7,0:7:19.31:0,19,279	1/1:4,3:17:37.20:556,37,0	1/1:4,0:5:11.45:124,11,0	0/0:20,0:20:54.18:0,54,807	1/1:3,11:13:39.13:659,39,0	0/0:18,0:18:54.15:0,54,782	1/1:0,8:8:24.08:406,24,0
chr10	36662343	.	G	GGGT	11192.03	PASS	AB=0.852;AC=30;AF=0.536;AN=56;BaseQRankSum=2.161;DP=533;FS=5.810;HRun=0;HaplotypeScore=172.9219;InbreedingCoeff=0.8720;MQ=57.13;MQ0=14;MQRankSum=-8.495;QD=41.92;ReadPosRankSum=5.074;VQSLOD=5.8213;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,17:29:67.09:1433,67,0	0/0:9,0:9:23.75:0,24,345	0/0:57,0:17:42.94:0,43,484	0/0:48,0:18:17.92:0,18,224	1/1:27,0:27:65.74:719,66,0	1/1:4,15:19:50.98:1199,51,0	1/1:3,5:7:21.07:471,21,0	0/0:25,0:24:72.25:0,72,1300	1/1:12,0:12:36.06:397,36,0	1/1:6,13:19:57.20:1288,57,0	1/1:6,13:18:51.09:1086,51,0	0/1:9,0:9:3.01:150,0,3	0/0:16,0:14:39.13:0,39,595	0/0:15,0:15:22.95:0,23,447	1/1:5,16:19:54.19:1279,54,0	1/1:15,0:15:45.10:489,45,0	1/1:23,0:23:47.75:522,48,0	0/1:11,8:19:13.57:900,0,14	0/0:21,0:20:57.63:0,58,995	0/0:18,0:19:48.83:0,49,764	0/0:9,0:7:18.06:0,18,281	0/0:7,0:7:18.95:0,19,306	1/1:19,0:18:31.51:533,32,0	1/1:5,0:5:10.13:111,10,0	0/0:20,0:20:54.18:0,54,871	1/1:14,0:13:38.11:403,38,0	0/0:18,0:18:54.15:0,54,861	1/1:8,0:8:23.99:212,24,0
chr10	36662353	.	GTT	G	32.99	PASS	AB=0.871;AC=4;AF=0.071;AN=56;BaseQRankSum=-4.279;DP=533;FS=4.604;HRun=13;HaplotypeScore=189.7949;InbreedingCoeff=-0.0720;MQ=52.42;MQ0=16;MQRankSum=0.480;QD=0.44;ReadPosRankSum=-3.025;VQSLOD=0.0581;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:27:54.18:0,54,388	0/0:7,0:7:20.43:0,20,149	0/0:61,0:16:4.72:0,5,65	0/0:43,0:15:14.20:0,14,97	0/1:28,0:27:5.40:5,0,170	0/0:20,0:20:34.94:0,35,257	0/0:7,0:6:11.87:0,12,83	0/0:21,0:21:22.68:0,23,180	0/0:13,1:15:8.42:0,8,160	0/0:22,0:22:46.66:0,47,322	0/0:21,0:20:35.72:0,36,223	0/0:10,0:12:18.23:0,18,129	0/0:13,0:12:10.35:0,10,167	0/0:14,0:13:11.88:0,12,132	0/0:21,0:19:45.79:0,46,328	0/0:19,0:20:42.46:0,42,314	0/1:18,3:21:19.01:19,0,182	0/0:17,0:17:21.36:0,21,284	0/0:23,0:21:34.55:0,35,254	0/0:21,0:21:23.95:0,24,188	0/0:9,0:7:5.98:0,6,47	0/0:8,0:8:8.57:0,9,122	0/0:16,0:15:29.14:0,29,197	0/0:4,0:4:3.44:0,3,11	0/0:17,0:17:25.76:0,26,246	0/1:15,1:15:2.40:2,0,158	0/0:13,0:14:10.18:0,10,139	0/1:5,5:10:44.12:100,0,44
chr10	36662356	.	T	TG	2980.24	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=2.850;DP=539;FS=3.063;HRun=0;HaplotypeScore=172.9379;InbreedingCoeff=0.9039;MQ=51.29;MQ0=17;MQRankSum=-5.358;QD=21.60;ReadPosRankSum=2.447;VQSLOD=4.2145;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,22:27:64.81:715,65,0	0/0:7,0:7:12.80:0,13,113	0/0:60,0:16:1.51:0,2,141	0/0:42,0:14:6.67:0,7,53	0/0:26,0:25:56.42:0,56,314	1/1:5,14:19:47.66:449,48,0	1/1:3,5:7:14.75:136,15,0	0/0:23,0:22:53.68:0,54,383	0/0:16,0:16:45.45:0,45,253	1/1:10,12:22:44.49:500,44,0	1/1:8,11:18:25.68:361,26,0	0/0:12,0:12:34.24:0,34,256	0/0:14,0:12:21.76:0,22,110	0/0:14,0:12:24.96:0,25,144	1/1:6,19:23:53.76:541,54,0	0/0:21,0:21:40.29:0,40,215	0/0:23,0:23:58.42:0,58,351	1/1:4,13:17:22.68:472,23,0	0/0:21,0:19:48.06:0,48,368	0/0:21,0:21:34.28:0,34,248	0/0:9,0:7:11.82:0,12,84	0/0:8,0:8:18.90:0,19,126	0/0:15,0:14:32.84:0,33,241	0/0:4,0:4:4.03:0,4,26	0/0:18,0:18:28.36:0,28,205	0/0:15,0:14:40.04:0,40,243	0/0:16,0:16:26.36:0,26,173	0/0:15,0:15:36.70:0,37,263
chr10	36662363	.	T	TGTTTG	7340.32	PASS	AB=0.840;AC=31;AF=0.554;AN=56;BaseQRankSum=-9.179;DP=554;FS=2.513;HRun=0;HaplotypeScore=185.4811;InbreedingCoeff=0.2024;MQ=51.10;MQ0=15;MQRankSum=-1.255;QD=20.06;ReadPosRankSum=2.980;VQSLOD=4.4318;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:24.81:0,25,275	1/1:0,6:8:21.07:598,21,0	0/0:46,0:12:24.40:0,24,240	0/0:38,0:13:9.55:0,10,119	0/1:14,0:25:15.48:50,0,15	0/0:18,0:18:13.63:0,14,86	0/1:10,0:9:5.38:5,0,78	1/1:3,18:25:60.59:1174,61,0	0/1:12,0:17:40.72:41,0,57	0/0:23,0:24:19.56:0,20,212	0/1:16,0:15:14.82:15,0,119	0/1:12,0:12:57.60:58,0,185	1/1:2,12:18:30.10:750,30,0	1/1:4,9:15:24.08:586,24,0	0/0:27,0:24:28.55:0,29,122	0/1:4,0:22:21.98:22,0,23	0/1:15,0:23:32.49:32,0,108	0/1:18,0:19:15.72:16,0,268	1/1:8,9:18:2.60:725,3,0	1/1:1,18:23:41.84:872,42,0	1/1:2,2:6:6.02:180,6,0	1/1:0,7:8:21.07:573,21,0	0/1:14,0:13:10.54:11,0,275	0/0:5,0:5:5.87:0,6,40	1/1:2,10:22:35.76:875,36,0	0/1:10,0:17:1.89:81,0,2	1/1:3,11:20:30.07:666,30,0	0/1:14,0:17:10.32:10,0,22
chr10	36662364	.	TTTG	T	566.72	PASS	AB=0.952;AC=13;AF=0.232;AN=56;BaseQRankSum=-4.992;DP=535;FS=1.681;HRun=0;HaplotypeScore=182.7759;InbreedingCoeff=0.0475;MQ=50.05;MQ0=15;MQRankSum=-0.353;QD=2.82;ReadPosRankSum=-4.037;VQSLOD=1.6420;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:31,0:30:30.30:195,0,30	0/0:8,0:8:21.07:0,21,315	0/0:45,0:11:9:0,9,141	0/0:36,0:13:14.41:0,14,119	0/0:24,0:23:56.47:0,56,601	0/1:16,2:18:23.33:23,0,44	1/1:10,0:9:2.58:73,3,0	0/0:23,0:22:19.53:0,20,652	0/0:14,0:14:36.37:0,36,390	0/1:15,9:24:43.85:122,0,44	0/1:15,1:15:32.45:64,0,32	0/1:11,0:11:36.67:37,0,68	0/1:20,0:18:7.01:7,0,293	0/0:16,0:14:19.30:0,19,251	0/1:27,0:24:49.36:49,0,55	0/0:20,0:20:35.27:0,35,566	0/0:22,0:22:55.51:0,56,573	1/1:19,0:19:5.16:109,5,0	0/0:17,0:15:32.84:0,33,413	0/0:23,0:23:32.10:0,32,414	0/0:7,0:5:6.02:0,6,89	0/0:8,0:8:4.58:0,5,241	0/0:13,1:13:18.77:0,19,80	0/1:5,0:5:1.75:23,0,2	0/0:21,0:21:19.61:0,20,440	0/0:18,0:18:50.62:0,51,537	0/1:20,0:20:14.69:15,0,264	0/0:17,0:17:43.80:0,44,431
chr10	36662366	.	TG	T	1873.39	PASS	AB=0.907;AC=21;AF=0.375;AN=56;BaseQRankSum=4.647;DP=529;FS=0.831;HRun=1;HaplotypeScore=163.0581;InbreedingCoeff=0.9082;MQ=48.22;MQ0=14;MQRankSum=-3.957;QD=8.80;ReadPosRankSum=-0.533;VQSLOD=0.7167;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:31,0:30:70.17:370,70,0	0/0:8,0:8:20.90:0,21,160	0/1:35,4:10:6.23:6,0,93	0/0:31,2:12:11.31:0,11,87	0/0:25,0:24:56.08:0,56,380	1/1:17,0:17:40.68:185,41,0	1/1:9,0:8:20.08:113,20,0	0/0:21,0:20:48.44:0,48,398	0/0:14,0:14:27.96:0,28,221	1/1:23,0:23:26.97:241,27,0	1/1:17,0:16:39.21:199,39,0	1/1:9,2:11:14.11:148,14,0	0/0:21,0:19:28.67:0,29,178	0/0:16,0:14:20.25:0,20,121	1/1:27,0:24:54.39:271,54,0	0/0:21,0:21:39.93:0,40,304	0/0:22,0:22:22.63:0,23,307	1/1:18,0:18:46.88:255,47,0	0/0:15,0:13:32.69:0,33,235	0/0:24,0:24:44.12:0,44,307	0/0:7,0:5:5.93:0,6,41	0/0:8,0:8:20.11:0,20,139	1/1:10,5:14:25.51:204,26,0	1/1:6,0:6:14.30:99,14,0	0/0:21,0:21:34.76:0,35,240	0/0:19,0:18:53.21:0,53,385	0/0:23,0:23:28.88:0,29,202	0/0:18,0:18:43.53:0,44,321
chr10	36662367	.	G	GTTGTTT	474.31	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=-3.713;DP=532;FS=0.000;HRun=0;HaplotypeScore=208.6917;InbreedingCoeff=0.7352;MQ=48.45;MQ0=14;MQRankSum=0.186;QD=8.62;ReadPosRankSum=-1.231;VQSLOD=2.4278;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:30:25.27:0,25,311	0/0:8,0:8:18.54:0,19,105	0/0:35,0:10:18.77:0,19,245	0/0:31,0:11:13.19:0,13,171	0/0:25,0:24:57.04:0,57,623	0/0:17,0:17:39.28:0,39,197	0/0:10,0:8:12.51:0,13,84	0/0:20,0:19:38.46:0,38,466	0/0:14,0:14:38.38:0,38,369	0/0:23,0:23:34.30:0,34,246	0/0:17,0:16:10.80:0,11,136	1/1:10,0:11:15.13:239,15,0	0/0:21,0:19:6.33:0,6,73	0/1:17,0:15:8.69:9,0,10	0/0:27,0:24:26.11:0,26,201	0/0:21,0:22:22.12:0,22,516	0/0:22,0:22:58.98:0,59,646	0/0:18,0:18:19.19:0,19,254	0/0:15,0:13:30.61:0,31,221	0/0:23,0:23:30.66:0,31,231	0/0:8,0:6:4.44:0,4,15	0/0:8,0:8:18.17:0,18,79	1/1:10,5:19:9.37:289,9,0	1/1:7,0:7:10.37:72,10,0	0/0:22,0:22:30.11:0,30,183	0/0:19,0:18:53.96:0,54,558	0/0:23,0:23:22.26:0,22,178	0/0:18,0:18:48.08:0,48,595
chr10	36665662	.	TA	T	9933.57	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-4.482;DP=487;FS=28.945;HRun=10;HaplotypeScore=59.9203;InbreedingCoeff=0.9353;MQ=68.45;MQ0=0;MQRankSum=-5.811;QD=21.27;ReadPosRankSum=3.217;VQSLOD=3.5964;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,22:28:56.97:495,57,0	1/1:0,9:9:26.99:234,27,0	0/0:10,0:10:15.83:0,16,207	0/0:9,0:9:14.85:0,15,132	1/1:5,15:20:39.82:362,40,0	1/1:2,25:27:62.99:547,63,0	1/1:3,9:12:20.99:182,21,0	1/1:2,29:31:86.90:738,87,0	1/1:1,12:13:32.99:286,33,0	1/1:1,15:16:44.96:386,45,0	1/1:1,33:34:98.88:850,99,0	1/1:3,13:16:32.99:286,33,0	1/1:2,18:20:44.98:391,45,0	1/1:1,12:13:35.99:313,36,0	1/1:2,14:17:44.03:371,44,0	1/1:1,14:16:38.03:319,38,0	1/1:1,22:23:53.96:462,54,0	1/1:1,10:11:29.99:260,30,0	1/1:3,23:26:68.96:595,69,0	1/1:2,20:22:56.87:479,57,0	1/1:0,6:6:15:130,15,0	1/1:1,5:6:8.98:78,9,0	1/1:5,23:28:65.90:565,66,0	1/1:2,8:10:23.99:208,24,0	1/1:1,19:20:50.99:442,51,0	1/1:2,18:20:53.96:464,54,0	1/1:1,16:17:41.99:365,42,0	1/1:2,4:6:14.98:127,15,0
chr10	36666354	.	GGATGGATA	G	3887.70	PASS	AB=1.000;AC=21;AF=0.457;AN=46;BaseQRankSum=-13.196;DP=610;FS=0.000;HRun=0;HaplotypeScore=282.4974;InbreedingCoeff=-0.3935;MQ=75.75;MQ0=5;MQRankSum=-3.653;QD=7.29;ReadPosRankSum=-3.742;VQSLOD=1.4055;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:47,0:47:99:223,0,1664	0/0:8,0:8:4.06:0,4,404	0/0:30,0:26:58.24:0,58,677	0/0:24,0:18:32.10:0,32,309	./.	0/1:33,0:33:99:183,0,1239	0/1:32,0:32:99:177,0,774	0/1:39,0:37:31.53:516,0,32	./.	0/1:30,0:30:99:174,0,711	0/0:14,0:14:3.51:0,4,538	1/1:5,16:21:20.09:661,20,0	0/1:32,0:32:99:178,0,1061	0/1:18,0:18:99:132,0,492	0/1:37,0:37:99:172,0,1220	./.	./.	0/1:18,0:18:19.04:19,0,841	0/1:27,0:25:99:249,0,460	0/1:28,0:28:99:117,0,711	0/1:46,0:46:99:203,0,1794	0/1:17,0:17:33.43:33,0,584	1/1:3,24:27:26.87:549,27,0	1/1:5,24:29:8.98:170,9,0	0/1:18,0:18:12.03:12,0,779	0/0:1,0:1:3.01:0,3,71	0/1:34,0:34:99:120,0,1250	./.
chr10	36666358	.	GGATA	G	4295.88	PASS	AB=0.963;AC=24;AF=0.522;AN=46;BaseQRankSum=-10.312;DP=597;FS=7.127;HRun=0;HaplotypeScore=229.1154;InbreedingCoeff=-0.4356;MQ=73.28;MQ0=5;MQRankSum=-1.263;QD=7.87;ReadPosRankSum=-10.307;VQSLOD=0.7097;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:41,4:45:99:305,0,514	0/1:9,0:9:38.46:38,0,107	0/0:28,0:24:56.78:0,57,608	0/0:22,0:16:25.22:0,25,256	./.	0/1:32,1:33:99:263,0,354	0/1:35,0:35:99:364,0,189	1/1:39,0:37:32.88:641,33,0	./.	0/1:27,2:29:99:312,0,136	0/1:14,0:14:38.02:38,0,165	1/1:19,0:19:20.08:286,20,0	0/1:30,2:32:99:239,0,321	0/1:19,0:19:99:152,0,156	0/1:34,2:36:99:204,0,330	./.	./.	0/1:19,0:19:55.51:56,0,299	0/1:25,1:24:99:291,0,111	0/1:26,1:27:99:189,0,181	0/1:42,2:44:99:231,0,550	0/1:15,1:16:99:106,0,163	1/1:27,0:27:23.83:215,24,0	1/1:26,0:26:8.96:77,9,0	0/1:17,2:19:91.45:91,0,244	0/0:1,0:1:2.98:0,3,22	0/1:31,1:32:99:198,0,397	./.
chr10	36668016	.	AAT	A	7722.86	PASS	AC=20;AF=0.435;AN=46;BaseQRankSum=11.790;DP=515;FS=4.657;HRun=0;HaplotypeScore=78.1366;InbreedingCoeff=0.9679;MQ=64.62;MQ0=4;MQRankSum=-0.920;QD=39.00;ReadPosRankSum=2.158;VQSLOD=6.3712;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,108,1919	1/1:0,6:6:15.05:220,15,0	0/0:25,0:20:57.13:0,57,999	0/0:24,0:23:50.91:0,51,938	./.	0/0:33,0:33:93.30:0,93,1702	0/0:30,0:30:87.28:0,87,1579	1/1:1,27:28:81.20:1079,81,0	./.	0/0:20,0:20:60.21:0,60,1122	0/0:25,0:25:75.26:0,75,1399	0/0:19,0:19:54.19:0,54,999	1/1:0,22:21:63.21:924,63,0	1/1:1,17:18:42.14:618,42,0	0/0:33,0:33:99:0,99,1821	./.	./.	0/0:24,0:24:69.24:0,69,1291	1/1:3,15:16:45.14:644,45,0	1/1:1,24:25:66.22:971,66,0	1/1:0,30:30:78.26:1148,78,0	1/1:0,12:12:33.11:486,33,0	0/0:15,0:15:45.15:0,45,823	0/0:31,0:31:81.25:0,81,1434	1/1:0,14:14:42.14:617,42,0	0/0:1,0:1:3.01:0,3,56	1/1:0,25:24:69.23:1016,69,0	./.
chr10	36669372	.	G	GGAGAAGAGAAGAGAA	14056.78	PASS	AC=40;AF=0.909;AN=44;BaseQRankSum=2.590;DP=605;FS=33.673;HRun=0;HaplotypeScore=288.7856;InbreedingCoeff=0.7505;MQ=48.26;MQ0=22;MQRankSum=-1.534;QD=32.92;ReadPosRankSum=3.562;VQSLOD=2.8195;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:24:24.08:847,24,0	1/1:11,1:11:6.02:290,6,0	0/0:76,0:27:11.14:0,11,132	0/0:101,0:25:14.15:0,14,259	./.	1/1:35,0:35:45.12:1217,45,0	1/1:15,0:15:24.01:384,24,0	1/1:39,0:39:45.11:896,45,0	./.	1/1:28,0:27:33.11:928,33,0	1/1:23,0:22:24.08:585,24,0	1/1:25,0:25:21.07:776,21,0	1/1:11,4:20:6.02:426,6,0	1/1:9,4:15:15.05:948,15,0	1/1:28,0:27:30.10:918,30,0	./.	./.	1/1:7,0:7:9.03:256,9,0	1/1:19,0:18:14.84:410,15,0	1/1:20,0:19:27.09:855,27,0	1/1:9,0:9:6.02:151,6,0	1/1:9,10:21:13.60:852,14,0	1/1:19,0:19:30.10:1154,30,0	1/1:15,0:15:17:330,17,0	1/1:11,5:23:9.03:597,9,0	./.	1/1:30,0:30:30.10:1234,30,0	./.
chr10	36676634	.	C	CCCT	3808.23	PASS	AC=16;AF=0.348;AN=46;BaseQRankSum=-0.267;DP=374;FS=34.228;HRun=0;HaplotypeScore=196.4988;InbreedingCoeff=0.8729;MQ=65.91;MQ0=0;MQRankSum=-3.785;QD=33.12;ReadPosRankSum=-1.345;VQSLOD=1.6956;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,16:26:48.04:887,48,0	0/0:9,0:9:21.07:0,21,304	0/0:20,0:14:9.03:0,9,130	0/0:22,0:21:8.40:0,8,345	./.	1/1:9,16:25:10.82:953,11,0	1/1:6,5:11:11.53:192,12,0	0/0:33,0:33:48.07:0,48,617	./.	1/1:7,11:18:38.71:708,39,0	1/1:4,6:10:14.90:218,15,0	0/0:20,0:20:27.84:0,28,590	0/0:16,0:16:22.99:0,23,481	0/0:28,0:28:66.12:0,66,888	1/1:5,9:14:26.63:488,27,0	./.	./.	1/1:5,5:10:10.43:300,10,0	0/0:12,0:12:21.07:0,21,302	0/0:10,0:10:27.09:0,27,383	0/0:15,0:15:24.06:0,24,327	0/0:9,0:9:3.57:0,4,206	0/0:14,0:14:7.93:0,8,235	0/0:9,0:9:15.04:0,15,198	0/0:20,0:20:42.14:0,42,607	1/1:0,1:1:3.01:61,3,0	0/0:22,0:22:47.63:0,48,631	./.
chr10	36676800	.	TCC	T	6170.36	PASS	AB=0.833;AC=43;AF=0.977;AN=44;BaseQRankSum=-4.767;DP=249;FS=0.000;HRun=7;HaplotypeScore=62.6123;InbreedingCoeff=-0.0362;MQ=91.08;MQ0=0;MQRankSum=-4.986;QD=24.78;ReadPosRankSum=2.742;VQSLOD=3.5051;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,14:16:39.12:491,39,0	1/1:3,5:8:17.79:203,18,0	1/1:9,2:10:6.45:136,6,0	0/1:20,5:24:99:255,0,175	./.	1/1:2,10:12:21.07:265,21,0	1/1:1,8:9:21.06:267,21,0	1/1:2,14:16:42.08:503,42,0	./.	1/1:4,10:14:30.09:380,30,0	1/1:2,9:11:15.05:191,15,0	1/1:0,13:13:39.12:494,39,0	1/1:0,7:7:18.06:229,18,0	1/1:3,11:14:33.10:415,33,0	1/1:1,8:9:18.06:229,18,0	./.	./.	1/1:1,6:7:18.05:229,18,0	1/1:0,7:7:20.96:214,21,0	1/1:3,5:8:15.05:189,15,0	1/1:1,7:8:15.04:191,15,0	1/1:3,6:9:15.05:188,15,0	1/1:1,8:9:15.05:191,15,0	1/1:2,3:5:9.03:114,9,0	1/1:4,10:14:27.08:336,27,0	./.	1/1:4,13:17:36.11:459,36,0	./.
chr10	36676806	.	CCA	C	2146.37	PASS	AB=0.979;AC=33;AF=0.750;AN=44;BaseQRankSum=2.699;DP=229;FS=0.751;HRun=0;HaplotypeScore=74.5751;InbreedingCoeff=-0.3316;MQ=81.69;MQ0=0;MQRankSum=-4.455;QD=9.37;ReadPosRankSum=8.675;VQSLOD=2.5050;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:14:37.41:210,37,0	1/1:6,0:6:17.22:97,17,0	0/1:4,1:6:8.36:44,0,8	0/1:19,2:20:48.38:48,0,192	./.	1/1:10,0:10:20.23:118,20,0	0/1:10,0:10:23.85:82,0,24	0/1:21,0:21:99:105,0,110	./.	1/1:11,0:11:2.04:126,2,0	0/1:10,0:10:7.67:59,0,8	1/1:14,0:14:16.31:221,16,0	0/1:8,0:8:4.61:79,0,5	1/1:12,1:13:10.67:221,11,0	1/1:8,0:8:17.34:102,17,0	./.	./.	0/1:8,0:8:16.65:76,0,17	0/1:9,0:9:25.11:25,0,37	0/1:7,0:7:7.51:82,0,8	0/1:10,0:10:28.44:66,0,28	0/1:7,0:7:7.43:67,0,7	1/1:8,0:8:14.39:83,14,0	1/1:4,0:4:8.39:39,8,0	1/1:11,0:11:7.89:121,8,0	./.	1/1:13,0:13:34.85:206,35,0	./.
chr10	36678999	.	T	TAC	146.81	PASS	AB=0.912;AC=7;AF=0.146;AN=48;BaseQRankSum=1.535;DP=290;FS=5.539;HRun=0;HaplotypeScore=87.1492;InbreedingCoeff=0.3300;MQ=48.76;MQ0=4;MQRankSum=-1.670;QD=1.93;ReadPosRankSum=-1.580;VQSLOD=1.3184;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:13,3:16:21.76:22,0,394	0/0:2,0:2:3.01:0,3,43	0/0:9,0:4:12.04:0,12,166	0/0:5,0:3:9.02:0,9,114	./.	0/0:25,0:25:63.13:0,63,869	0/0:6,0:6:9.03:0,9,121	0/1:35,2:35:13.71:14,0,1096	./.	0/0:19,0:19:54.18:0,54,773	0/0:16,0:16:48.16:0,48,687	0/0:12,0:12:24.08:0,24,344	0/0:10,0:10:21.07:0,21,301	0/0:7,0:7:15.05:0,15,215	0/0:12,0:12:33.11:0,33,465	./.	1/1:1,1:1:3.01:55,3,0	0/0:13,0:10:27.09:0,27,387	0/1:16,1:17:12.75:13,0,491	0/0:7,0:6:12.04:0,12,172	0/0:10,0:9:18.06:0,18,258	0/0:11,0:11:24.08:0,24,344	0/0:11,0:11:21.07:0,21,288	0/0:10,0:10:24.08:0,24,343	0/0:10,0:8:18.06:0,18,258	1/1:1,3:4:9.03:165,9,0	0/0:19,0:17:45.15:0,45,644	./.
chr10	36679012	.	TAATAAATAAATAAATAAATAAATA	T	6131.07	PASS	AC=18;AF=0.563;AN=32;BaseQRankSum=1.963;DP=249;FS=4.391;HRun=0;HaplotypeScore=167.4474;InbreedingCoeff=0.7042;MQ=49.76;MQ0=7;MQRankSum=-2.758;QD=51.52;ReadPosRankSum=5.011;VQSLOD=3.9164;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:8,8:16:8.06:431,8,0	./.	./.	./.	./.	1/1:8,17:26:30.10:1870,30,0	1/1:2,5:7:3.01:189,3,0	0/0:27,0:32:60.21:0,60,3329	./.	1/1:5,11:16:27.09:1423,27,0	1/1:8,9:17:21.07:1169,21,0	1/1:6,4:10:3.01:189,3,0	0/0:4,0:9:6.02:0,6,307	0/0:3,0:5:3.01:0,3,154	1/1:8,5:13:9.03:568,9,0	./.	./.	1/1:9,0:8:3.01:72,3,0	0/0:12,0:16:18.06:0,18,954	0/0:2,0:4:6.02:0,6,330	./.	./.	1/1:3,2:5:6.02:220,6,0	./.	0/0:4,0:5:9.03:0,9,472	./.	0/0:8,0:12:15.05:0,15,712	./.
chr10	36679735	.	CACACACACAT	C	1481.72	PASS	AB=0.953;AC=21;AF=0.457;AN=46;BaseQRankSum=-5.975;DP=486;FS=31.689;HRun=0;HaplotypeScore=203.6210;InbreedingCoeff=-0.0368;MQ=50.62;MQ0=18;MQRankSum=5.039;QD=4.37;ReadPosRankSum=-4.573;VQSLOD=0.1960;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:26:92.21:168,0,92	0/0:10,0:9:8.88:0,9,72	0/0:19,0:6:14.37:0,14,110	0/0:15,0:5:8.03:0,8,75	./.	1/1:29,0:28:0.47:1,0,0	0/1:25,0:24:31.51:158,0,32	0/1:25,0:24:44.29:229,0,44	./.	0/1:31,1:31:99:275,0,112	0/0:22,0:22:5.97:0,6,45	1/1:17,3:20:27.02:390,27,0	0/1:17,0:17:4.95:5,0,33	0/0:18,0:18:6.90:0,7,65	1/1:21,0:21:1.46:15,1,0	./.	./.	0/0:18,0:18:3.94:0,4,22	0/1:23,0:20:87.42:87,0,358	1/1:17,0:16:0.47:1,0,0	0/1:32,0:32:28.22:171,0,28	0/0:20,0:20:15.05:0,15,200	0/1:8,15:23:14.09:28,0,14	1/1:9,19:28:3.01:34,3,0	0/0:25,0:25:8.71:0,9,110	1/1:1,0:1:3:28,3,0	0/1:19,0:19:31.73:32,0,48	./.
chr10	36679739	.	CACACAT	C	3956.23	PASS	AB=0.728;AC=39;AF=0.848;AN=46;BaseQRankSum=0.390;DP=494;FS=2.150;HRun=0;HaplotypeScore=177.7949;InbreedingCoeff=0.4782;MQ=51.47;MQ0=18;MQRankSum=2.253;QD=8.64;ReadPosRankSum=2.584;VQSLOD=2.8908;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:30,1:30:36.14:427,36,0	1/1:8,0:7:9:88,9,0	0/0:19,0:7:17.11:0,17,141	0/0:15,0:6:10.44:0,10,93	./.	0/1:3,26:28:0:0,0,0	1/1:21,5:25:47.18:473,47,0	1/1:2,23:24:68.49:507,68,0	./.	1/1:5,27:31:65.78:665,66,0	1/1:1,23:24:6.02:95,6,0	1/1:19,0:19:26.83:235,27,0	1/1:16,0:16:5.39:27,5,0	1/1:15,2:17:8.89:60,9,0	1/1:2,19:21:5.93:86,6,0	./.	./.	1/1:1,17:18:9.82:109,10,0	0/1:11,12:20:10.43:292,0,10	1/1:17,1:17:0.47:1,0,0	1/1:34,0:34:53.83:494,54,0	1/1:19,1:20:13.13:63,13,0	0/1:23,0:23:1.21:1,0,15	1/1:28,0:28:3.01:47,3,0	1/1:24,2:26:8.14:47,8,0	1/1:1,0:1:3:28,3,0	1/1:17,2:19:17.60:211,18,0	./.
chr10	36679741	.	CACAT	C	4219.19	PASS	AB=0.749;AC=38;AF=0.826;AN=46;BaseQRankSum=1.154;DP=490;FS=2.029;HRun=0;HaplotypeScore=164.1224;InbreedingCoeff=0.6426;MQ=54.96;MQ0=18;MQRankSum=0.601;QD=9.83;ReadPosRankSum=3.432;VQSLOD=4.2807;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:30,1:30:37.62:437,38,0	1/1:1,7:7:9.03:156,9,0	0/0:22,0:9:22.34:0,22,193	0/0:17,0:7:13.40:0,13,116	./.	0/1:28,1:28:0:0,0,0	1/1:27,0:26:49.97:386,50,0	1/1:25,0:24:68.47:487,68,0	./.	1/1:32,0:31:68.63:587,69,0	1/1:24,0:24:5.90:37,6,0	1/1:19,0:19:26.90:227,27,0	1/1:0,16:16:5.58:63,6,0	1/1:2,13:15:8.96:130,9,0	1/1:21,0:21:5.93:53,6,0	./.	./.	1/1:17,0:17:8.93:75,9,0	1/1:21,2:20:20.57:429,21,0	0/1:2,15:16:0:0,0,0	1/1:30,3:33:54.25:427,54,0	1/1:1,19:20:15.05:228,15,0	0/0:22,0:22:6.42:0,6,43	1/1:27,0:27:3.01:33,3,0	1/1:2,23:25:9.03:146,9,0	1/1:1,0:1:3:28,3,0	1/1:2,17:19:17.38:291,17,0	./.
chr10	36679743	.	CAT	C	3498.09	PASS	AB=1.000;AC=38;AF=0.826;AN=46;BaseQRankSum=1.930;DP=482;FS=4.489;HRun=0;HaplotypeScore=155.1863;InbreedingCoeff=0.6405;MQ=58.39;MQ0=18;MQRankSum=-0.167;QD=8.35;ReadPosRankSum=3.706;VQSLOD=3.1385;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:28:52.72:422,53,0	1/1:8,0:7:8.99:76,9,0	0/0:24,0:11:27.48:0,27,230	0/0:18,0:8:16.36:0,16,136	./.	0/1:28,0:27:0:0,0,0	1/1:26,1:26:52.31:386,52,0	1/1:25,0:24:68.47:489,68,0	./.	1/1:31,0:30:69.24:559,69,0	1/1:23,0:23:5.83:33,6,0	1/1:16,2:18:26.90:227,27,0	1/1:16,0:16:5.66:32,6,0	1/1:15,0:15:8.93:66,9,0	1/1:21,0:21:5.91:39,6,0	./.	./.	1/1:17,0:17:8.91:61,9,0	1/1:22,0:19:18.62:331,19,0	0/1:17,0:16:0:0,0,0	1/1:29,3:32:53.50:403,53,0	1/1:20,0:20:14.77:96,15,0	0/0:21,0:21:5.95:0,6,44	1/1:24,1:25:3.01:40,3,0	1/1:25,0:25:8.90:63,9,0	1/1:1,0:1:3:28,3,0	1/1:19,0:19:17.81:146,18,0	./.
chr10	36681965	.	AAAC	A	10097.76	PASS	AC=26;AF=0.591;AN=44;BaseQRankSum=13.177;DP=594;FS=0.753;HRun=0;HaplotypeScore=109.0427;InbreedingCoeff=0.9999;MQ=66.96;MQ0=10;MQRankSum=-0.758;QD=28.21;ReadPosRankSum=4.149;VQSLOD=4.8503;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:76.04:0,76,1402	1/1:3,13:15:33.11:497,33,0	0/0:32,0:26:41.66:0,42,733	0/0:26,0:23:41.48:0,41,718	./.	0/0:34,0:33:87.62:0,88,1725	0/0:24,0:24:60.19:0,60,1170	1/1:9,17:25:48.11:627,48,0	./.	0/0:22,0:21:37.01:0,37,655	0/0:18,0:18:42.14:0,42,811	1/1:5,30:35:69.23:1039,69,0	1/1:6,37:43:81.27:1215,81,0	1/1:3,21:23:45.15:670,45,0	0/0:31,0:31:87.26:0,87,1578	./.	./.	0/0:20,0:20:51.15:0,51,956	1/1:4,18:21:48.09:671,48,0	1/1:5,27:31:72.21:1019,72,0	1/1:5,20:25:39.13:587,39,0	1/1:3,23:25:57.11:794,57,0	1/1:4,19:23:35.99:542,36,0	1/1:5,22:27:45.15:678,45,0	1/1:3,23:26:57.19:858,57,0	./.	1/1:6,27:32:60.20:901,60,0	./.
chr10	36682304	.	AAAAT	A	2069.83	PASS	AC=14;AF=0.318;AN=44;BaseQRankSum=2.991;DP=393;FS=0.533;HRun=0;HaplotypeScore=121.7845;InbreedingCoeff=0.8940;MQ=53.45;MQ0=1;MQRankSum=-2.995;QD=13.10;ReadPosRankSum=1.151;VQSLOD=3.4298;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,21:23:10.79:140,11,0	0/0:12,0:12:23.97:0,24,347	0/0:4,0:3:3.01:0,3,30	0/0:12,0:8:17.88:0,18,163	./.	1/1:1,24:25:29.93:391,30,0	1/1:13,0:13:29.84:250,30,0	0/0:27,0:27:71.90:0,72,801	./.	1/1:0,25:25:63.62:685,64,0	1/1:2,16:18:32.34:260,32,0	0/0:4,0:19:24.02:0,24,277	0/0:21,0:21:36.04:0,36,518	0/0:14,0:14:27.02:0,27,328	1/1:6,30:36:20.56:464,21,0	./.	./.	1/1:2,16:18:3.01:52,3,0	0/0:17,0:17:47.98:0,48,615	0/0:24,0:24:57:0,57,588	0/0:2,0:2:5.99:0,6,50	0/0:9,0:9:21:0,21,229	0/0:3,0:13:20.75:0,21,293	0/0:4,0:10:17.05:0,17,188	0/0:24,0:24:35.97:0,36,314	./.	0/0:26,0:26:53.90:0,54,623	./.
chr10	36682333	.	A	AAGG	895.25	PASS	AB=0.948;AC=18;AF=0.391;AN=46;BaseQRankSum=-0.878;DP=373;FS=0.000;HRun=0;HaplotypeScore=128.9950;InbreedingCoeff=-0.3500;MQ=47.39;MQ0=3;MQRankSum=-2.073;QD=3.16;ReadPosRankSum=-1.782;VQSLOD=2.0733;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:25:22.16:22,0,93	0/1:7,2:9:99:124,0,115	0/0:10,0:1:2.97:0,3,20	0/0:8,0:4:2.58:0,3,52	./.	0/1:28,0:28:24.12:24,0,102	0/1:19,0:19:57.89:58,0,96	0/0:25,0:25:2.16:0,2,351	./.	0/1:27,0:27:35.71:36,0,150	0/1:14,0:14:12.88:13,0,80	0/0:20,0:20:29.01:0,29,394	0/1:18,0:18:28.46:28,0,212	0/1:6,2:8:40.89:102,0,41	0/1:29,0:29:1.03:1,0,155	./.	./.	0/1:16,0:16:7.79:11,0,8	0/1:14,2:16:67.52:68,0,364	0/1:22,3:25:99:194,0,168	1/1:4,0:4:5.92:43,6,0	0/1:10,1:11:66.81:67,0,91	0/0:12,0:12:12.78:0,13,140	0/0:13,0:13:28.83:0,29,442	1/1:14,1:15:9.03:127,9,0	0/0:1,0:1:1.55:0,2,4	0/1:18,1:19:99:115,0,111	./.
chr10	36682337	.	A	AAAGGAAGGAAGG	8300.06	PASS	AB=1.000;AC=33;AF=0.717;AN=46;BaseQRankSum=-9.126;DP=385;FS=1.196;HRun=0;HaplotypeScore=156.7803;InbreedingCoeff=0.0403;MQ=47.78;MQ0=3;MQRankSum=-1.533;QD=23.58;ReadPosRankSum=-2.813;VQSLOD=3.3565;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:23:27.93:416,0,28	1/1:10,0:10:23.26:531,23,0	0/0:11,0:1:3.01:0,3,34	0/0:8,0:4:0.57:0,1,2	./.	0/1:28,0:28:99:468,0,141	1/1:20,0:20:10.13:698,10,0	1/1:27,0:27:57.17:949,57,0	./.	0/1:26,0:26:99:395,0,192	0/1:14,0:14:46.67:164,0,47	0/1:22,0:22:33.01:33,0,410	1/1:4,12:20:7.85:363,8,0	1/1:3,5:10:9.03:364,9,0	0/1:29,0:29:99:422,0,230	./.	./.	1/1:16,0:16:20.96:321,21,0	1/1:4,10:17:45.03:858,45,0	1/1:5,18:24:18.02:644,18,0	1/1:4,0:4:8.96:153,9,0	1/1:2,8:10:6.02:270,6,0	0/1:13,0:13:99:105,0,192	0/0:13,0:13:11.18:0,11,441	1/1:1,15:18:9.03:445,9,0	1/1:1,0:1:3.01:60,3,0	1/1:3,14:20:15.99:641,16,0	./.
chr10	36683384	.	TC	T	3646.33	PASS	AC=6;AF=0.136;AN=44;BaseQRankSum=11.012;DP=607;FS=0.421;HRun=1;HaplotypeScore=72.1317;InbreedingCoeff=0.9990;MQ=73.99;MQ0=0;MQRankSum=-1.884;QD=40.07;ReadPosRankSum=3.638;VQSLOD=4.2673;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:56:99:0,168,2574	0/0:21,0:21:63.21:0,63,1007	0/0:11,0:11:29.49:0,29,478	0/0:8,0:8:24.05:0,24,358	./.	0/0:27,0:27:81.28:0,81,1293	0/0:23,0:23:69.22:0,69,1080	0/0:33,0:33:96.31:0,96,1494	./.	0/0:40,0:40:99:0,120,1880	0/0:21,0:21:63.17:0,63,977	1/1:0,24:24:63.21:881,63,0	0/0:34,0:34:99:0,102,1603	0/0:27,0:27:78.25:0,78,1214	0/0:31,0:31:93.32:0,93,1487	./.	./.	0/0:16,0:16:48.12:0,48,731	0/0:26,0:26:78.27:0,78,1237	0/0:33,0:33:99:0,99,1556	0/0:23,0:23:69.24:0,69,1103	0/0:22,0:22:66.20:0,66,1009	1/1:0,35:35:99:1468,105,0	1/1:0,32:32:93.31:1297,93,0	0/0:27,0:27:81.25:0,81,1270	./.	0/0:37,0:37:99:0,111,1726	./.
chr10	36687193	.	GCA	G	547.73	PASS	AB=0.798;AC=19;AF=0.731;AN=26;BaseQRankSum=1.714;DP=148;FS=2.484;HRun=0;HaplotypeScore=55.3001;InbreedingCoeff=-0.0230;MQ=32.94;MQ0=6;MQRankSum=-1.038;QD=5.48;ReadPosRankSum=1.955;VQSLOD=2.3832;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/1:5,3:8:33.02:87,0,33	./.	./.	./.	./.	0/0:3,0:3:2.99:0,3,24	1/1:9,2:9:5.96:52,6,0	./.	./.	./.	0/1:12,0:12:43.56:44,0,58	1/1:2,2:4:3.01:33,3,0	1/1:5,3:10:11.49:74,11,0	./.	./.	./.	./.	1/1:10,1:11:8.82:68,9,0	1/1:11,2:16:14.54:108,15,0	./.	1/1:3,3:6:2.80:33,3,0	1/1:5,0:5:3:28,3,0	0/0:7,0:7:0:0,0,0	0/1:5,5:10:55.10:85,0,55	./.	1/1:5,1:6:3.01:33,3,0	./.
chr10	36687231	.	ACT	A	428.38	PASS	AB=1.000;AC=8;AF=0.182;AN=44;BaseQRankSum=5.470;DP=340;FS=9.987;HRun=0;HaplotypeScore=78.7772;InbreedingCoeff=0.5327;MQ=58.45;MQ0=14;MQRankSum=-2.665;QD=6.49;ReadPosRankSum=3.411;VQSLOD=1.7336;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:23:23.81:0,24,183	0/1:9,0:9:21.12:21,0,130	0/0:26,0:10:12.83:0,13,122	0/0:23,0:12:25.98:0,26,291	./.	0/0:15,0:15:5.99:0,6,50	0/0:11,0:10:20.87:0,21,180	0/0:24,0:23:60.45:0,60,584	./.	0/0:21,0:20:56.72:0,57,470	0/0:17,0:17:23.16:0,23,199	1/1:19,2:21:19.64:353,20,0	0/0:14,0:13:6.47:0,6,119	0/0:15,0:15:12.87:0,13,151	0/0:7,0:7:11.94:0,12,96	./.	./.	0/0:10,0:10:29.81:0,30,223	0/0:13,0:13:24.76:0,25,252	0/0:19,0:19:16.97:0,17,245	0/0:17,0:17:38.89:0,39,311	0/0:11,0:11:10.07:0,10,164	1/1:3,8:11:3.14:46,3,0	1/1:10,0:10:17.88:134,18,0	0/1:15,0:15:3.90:4,0,232	./.	0/0:7,0:7:0.51:0,1,73	./.
chr10	36687810	.	GA	G	1989.33	PASS	AC=6;AF=0.130;AN=46;BaseQRankSum=8.611;DP=556;FS=0.000;HRun=2;HaplotypeScore=69.1006;InbreedingCoeff=0.9387;MQ=84.06;MQ0=4;MQRankSum=-0.602;QD=30.61;ReadPosRankSum=2.831;VQSLOD=3.2761;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,132,1864	0/0:12,0:12:36.09:0,36,491	0/0:37,0:27:59.87:0,60,825	0/0:39,1:30:62.76:0,63,1028	./.	0/0:20,0:20:60.20:0,60,894	0/0:35,0:35:99:0,105,1502	0/0:28,0:28:84.27:0,84,1190	./.	0/0:24,0:24:69.23:0,69,1017	0/0:19,0:19:54.18:0,54,808	1/1:1,29:28:78.24:997,78,0	0/0:27,0:27:81.27:0,81,1208	0/0:22,0:22:63.21:0,63,922	0/0:28,0:28:84.25:0,84,1196	./.	./.	0/0:34,0:34:99:0,102,1471	0/0:24,0:24:69.22:0,69,985	0/0:20,0:20:60.20:0,60,888	0/0:10,0:10:30.09:0,30,428	0/0:14,0:14:42.14:0,42,623	1/1:1,18:17:45.09:584,45,0	1/1:0,16:16:42.14:545,42,0	0/0:27,0:27:81.27:0,81,1185	0/0:1,0:1:3.01:0,3,45	0/0:21,0:20:63.19:0,63,894	./.
chr10	36688123	.	T	TCC	1746.84	PASS	AB=0.867;AC=11;AF=0.196;AN=56;BaseQRankSum=9.823;DP=593;FS=53.795;HRun=0;HaplotypeScore=122.3344;InbreedingCoeff=0.8071;MQ=93.88;MQ0=0;MQRankSum=-9.909;QD=34.25;ReadPosRankSum=-3.421;VQSLOD=0.8229;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,111,1809	0/0:2,0:2:6.02:0,6,98	0/0:25,0:25:72.24:0,72,1140	0/0:29,0:29:40.23:0,40,1167	1/1:11,1:12:29.44:396,29,0	0/0:19,0:19:57.18:0,57,904	0/0:24,0:24:72.25:0,72,1169	0/0:35,0:35:99:0,105,1625	1/1:8,0:8:18.06:323,18,0	0/0:33,0:33:99:0,99,1593	0/0:18,0:18:54.18:0,54,858	0/0:25,0:25:75.24:0,75,1197	0/0:37,0:37:99:0,111,1786	0/0:25,0:25:75.23:0,75,1177	0/0:30,0:30:90.31:0,90,1468	1/1:12,1:13:25.81:458,26,0	1/1:2,1:4:6.91:112,7,0	0/0:24,0:24:72.21:0,72,1146	0/0:16,0:16:45.13:0,45,689	0/0:20,0:20:54.18:0,54,881	0/0:51,0:51:99:0,153,2422	0/0:15,0:15:45.15:0,45,732	0/0:20,0:20:60.20:0,60,975	0/0:29,0:29:87.30:0,87,1417	0/0:14,0:14:42.14:0,42,670	0/1:11,2:13:12.83:596,0,13	0/0:14,0:14:39.13:0,39,631	1/1:1,0:1:3:28,3,0
chr10	36688951	.	G	GT	6661.11	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=-14.973;DP=606;FS=2.331;HRun=8;HaplotypeScore=54.2578;InbreedingCoeff=0.9225;MQ=75.28;MQ0=0;MQRankSum=1.796;QD=27.75;ReadPosRankSum=-1.056;VQSLOD=5.1032;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:72.02:0,72,659	1/1:1,8:9:24.07:277,24,0	0/0:12,0:12:8.62:0,9,51	0/1:9,0:9:10.38:10,0,15	0/0:33,0:33:93.04:0,93,851	0/0:27,0:27:72.03:0,72,659	0/0:15,0:15:26.99:0,27,242	1/1:10,21:31:66.14:738,66,0	0/0:18,0:18:51.03:0,51,467	0/0:28,0:28:71.97:0,72,647	0/0:16,0:16:41.98:0,42,377	0/0:20,0:20:57.01:0,57,516	1/1:3,20:23:60.18:692,60,0	1/1:2,24:26:72.21:831,72,0	0/0:23,0:23:60.03:0,60,549	0/0:23,0:23:60.01:0,60,545	0/0:19,0:19:45:0,45,406	0/0:18,0:18:51.02:0,51,467	1/1:7,23:30:72.20:819,72,0	1/1:3,24:27:66.14:737,66,0	1/1:2,16:18:48.14:554,48,0	1/1:1,18:19:51.15:589,51,0	0/0:22,0:22:63.01:0,63,569	0/0:22,0:22:66.02:0,66,599	1/1:1,19:20:54.16:623,54,0	0/0:29,0:29:66:0,66,598	1/1:2,25:28:65.25:790,65,0	0/0:13,0:13:24:0,24,216
chr10	36689929	.	A	ACTTT	4934.21	PASS	AB=0.891;AC=13;AF=0.232;AN=56;BaseQRankSum=-1.067;DP=693;FS=2.020;HRun=0;HaplotypeScore=201.9468;InbreedingCoeff=0.7136;MQ=66.41;MQ0=3;MQRankSum=-7.006;QD=31.63;ReadPosRankSum=0.276;VQSLOD=4.3691;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:47.96:0,48,505	0/0:22,0:22:40.67:0,41,616	0/0:21,0:19:26.53:0,27,339	0/1:18,0:17:41.31:41,0,127	1/1:8,14:22:39.13:826,39,0	0/0:12,0:12:32.14:0,32,344	0/0:15,0:14:21.02:0,21,209	0/0:35,0:35:69.14:0,69,975	1/1:6,9:15:33.02:598,33,0	0/0:31,0:31:74.34:0,74,842	0/0:24,0:24:47.83:0,48,556	0/0:22,0:22:47.30:0,47,713	0/0:31,0:29:74.87:0,75,1087	0/0:18,0:18:39.08:0,39,641	0/0:26,0:26:59.73:0,60,674	1/1:6,16:22:57.02:1193,57,0	0/1:13,8:21:13.83:546,0,14	0/1:12,0:11:8.14:8,0,174	0/0:30,0:30:57.08:0,57,893	0/0:40,0:40:99:0,114,1781	0/0:17,0:17:20.95:0,21,263	0/0:35,0:34:83.89:0,84,1247	0/0:29,0:29:69.13:0,69,1122	0/0:25,0:24:41.70:0,42,536	0/0:33,0:32:86.74:0,87,1165	1/1:11,9:21:50.95:901,51,0	0/0:42,0:42:99:0,99,1599	1/1:6,18:24:36.12:821,36,0
chr10	36689942	.	CTTTG	C	4995.18	PASS	AB=1.000;AC=16;AF=0.286;AN=56;BaseQRankSum=1.299;DP=669;FS=1.601;HRun=0;HaplotypeScore=226.7088;InbreedingCoeff=0.8367;MQ=60.29;MQ0=3;MQRankSum=-4.536;QD=25.62;ReadPosRankSum=-0.845;VQSLOD=4.3313;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:22,3:25:55.21:834,55,0	0/0:18,0:18:45.15:0,45,903	0/0:25,0:20:48.62:0,49,723	0/1:20,0:16:4.80:5,0,211	0/1:22,0:22:14.59:15,0,237	1/1:10,4:14:41.84:522,42,0	1/1:7,10:16:23.93:454,24,0	0/0:37,0:37:96.17:0,96,1840	0/0:15,0:15:28.26:0,28,204	1/1:22,9:31:76.64:1134,77,0	1/1:23,4:26:62.18:883,62,0	0/0:22,0:22:65.94:0,66,1220	0/0:31,0:29:84.07:0,84,1714	0/0:16,0:16:45.08:0,45,1024	1/1:22,4:26:74.62:841,75,0	0/0:21,0:21:37.98:0,38,483	0/0:14,0:14:10.49:0,10,207	1/1:10,3:12:20.36:307,20,0	0/0:27,0:27:75.19:0,75,1558	0/0:46,0:46:99:0,138,2893	0/0:14,0:14:18.06:0,18,426	0/0:31,0:30:90.15:0,90,1927	0/0:26,0:26:72.23:0,72,1615	0/0:20,0:19:45.02:0,45,819	0/0:33,0:32:96.03:0,96,1819	0/0:19,0:19:22.11:0,22,322	0/0:41,0:41:99:0,120,2535	0/0:18,0:18:17.31:0,17,288
chr10	36689947	.	T	TC	644.48	PASS	AB=0.890;AC=9;AF=0.161;AN=56;BaseQRankSum=7.906;DP=654;FS=1.908;HRun=0;HaplotypeScore=215.1877;InbreedingCoeff=0.3915;MQ=57.74;MQ0=3;MQRankSum=-3.419;QD=4.27;ReadPosRankSum=2.379;VQSLOD=3.5627;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:20,3:23:10.32:122,0,10	0/0:16,0:16:45.15:0,45,629	0/0:26,0:21:59.95:0,60,719	0/0:16,1:12:2.93:0,3,163	0/0:24,0:24:40.48:0,40,371	0/1:14,2:16:0.35:62,0,0	0/1:16,0:15:25.63:26,0,36	0/0:36,0:36:99:0,99,1355	0/0:15,0:15:35.57:0,36,277	0/1:23,7:30:50.17:184,0,50	1/1:21,5:25:8.26:125,8,0	0/0:22,0:22:66.13:0,66,879	0/0:30,0:28:84.28:0,84,1169	0/0:16,0:16:48.16:0,48,674	1/1:19,8:27:25.99:244,26,0	0/0:20,0:20:55.75:0,56,356	0/0:13,0:13:36.83:0,37,294	0/1:11,2:12:24.65:31,0,25	0/0:29,0:29:87.25:0,87,1197	0/0:47,0:47:99:0,138,1909	0/0:12,0:12:18.06:0,18,252	0/0:32,0:31:90.30:0,90,1275	0/0:24,0:24:72.20:0,72,1012	0/0:20,0:19:47.04:0,47,557	0/0:33,0:32:96.27:0,96,1285	0/0:18,0:18:51.64:0,52,351	0/0:41,0:41:99:0,123,1727	0/0:12,0:12:35.05:0,35,218
chr10	36689953	.	TC	T	755.45	PASS	AB=0.881;AC=9;AF=0.161;AN=56;BaseQRankSum=9.316;DP=637;FS=2.900;HRun=1;HaplotypeScore=215.5881;InbreedingCoeff=-0.1834;MQ=56.93;MQ0=4;MQRankSum=-6.101;QD=4.27;ReadPosRankSum=5.519;VQSLOD=0.5441;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:20,3:23:99:186,0,119	0/0:15,0:15:41.94:0,42,439	0/0:30,0:21:63.20:0,63,905	0/0:18,0:11:31.20:0,31,408	0/0:25,0:25:12.45:0,12,411	0/1:15,2:17:23.46:77,0,23	0/1:16,0:15:33.11:33,0,87	0/0:38,0:38:96.65:0,97,1139	0/1:14,0:14:9.56:10,0,159	0/1:23,7:30:99:157,0,225	0/1:21,5:25:99:143,0,100	0/0:21,0:21:62.21:0,62,665	0/0:29,0:27:80.64:0,81,885	0/0:16,0:16:47.84:0,48,571	0/1:18,8:26:35.20:198,0,35	0/0:18,0:18:19.68:0,20,422	0/1:11,1:12:3.99:4,0,253	0/1:10,3:12:51.13:85,0,51	0/0:27,0:27:81.10:0,81,1044	0/0:45,0:45:99:0,135,1464	0/0:12,0:12:14.98:0,15,188	0/0:29,0:28:83.38:0,83,846	0/0:22,0:22:62.31:0,62,783	0/0:17,0:16:30.12:0,30,400	0/0:29,0:28:83.60:0,84,815	0/0:17,0:17:38.41:0,38,398	0/0:40,0:40:99:0,120,1175	0/0:12,0:12:18.71:0,19,249
chr10	36689954	.	CTTCT	C	10547.06	PASS	AB=1.000;AC=33;AF=0.589;AN=56;BaseQRankSum=-9.073;DP=638;FS=3.284;HRun=0;HaplotypeScore=216.1598;InbreedingCoeff=0.6135;MQ=56.71;MQ0=5;MQRankSum=4.582;QD=24.36;ReadPosRankSum=4.386;VQSLOD=4.4393;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:48.11:0,48,581	1/1:3,12:15:30.10:468,30,0	0/0:30,0:21:22.73:0,23,289	0/0:17,0:11:16.87:0,17,183	0/1:25,0:25:68.31:156,0,68	0/0:18,0:17:33.56:0,34,417	0/0:18,0:17:39.08:0,39,432	1/1:12,25:37:75.23:1052,75,0	0/1:14,0:14:64.10:117,0,64	0/0:31,0:31:72.20:0,72,932	0/0:28,0:27:69.19:0,69,871	1/1:21,0:21:46.42:376,46,0	1/1:17,12:27:69.18:1000,69,0	1/1:12,4:16:30.10:457,30,0	0/0:26,0:26:72.17:0,72,976	0/1:18,0:18:58.49:184,0,58	0/1:13,0:13:16.83:136,0,17	0/0:13,0:12:15.03:0,15,164	1/1:20,7:27:42.14:649,42,0	1/1:25,16:41:93.30:1405,93,0	1/1:3,9:12:6.02:100,6,0	1/1:17,12:28:66.22:1032,66,0	1/1:22,0:22:41.45:234,41,0	1/1:16,0:15:27.77:184,28,0	1/1:14,15:28:75.25:1174,75,0	0/1:17,0:17:99:161,0,135	1/1:21,19:40:96.32:1505,96,0	1/1:12,0:12:21.48:157,21,0
chr10	36689965	.	C	CT	443.58	PASS	AB=0.957;AC=12;AF=0.214;AN=56;BaseQRankSum=1.320;DP=612;FS=0.000;HRun=3;HaplotypeScore=218.2367;InbreedingCoeff=0.3625;MQ=52.82;MQ0=8;MQRankSum=-4.850;QD=2.92;ReadPosRankSum=1.066;VQSLOD=-0.2241;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:49.92:0,50,435	0/0:12,0:12:11.41:0,11,64	0/0:26,0:15:29.10:0,29,316	0/0:17,0:8:22.44:0,22,203	0/1:28,0:28:33.71:98,0,34	0/0:14,0:13:31:0,31,177	0/0:22,0:21:44.35:0,44,455	0/0:37,0:37:77.61:0,78,496	0/1:11,0:11:1.46:6,0,1	0/0:32,0:32:67.35:0,67,596	0/0:28,0:27:64.33:0,64,531	0/1:14,4:18:25.30:73,0,25	0/0:27,0:25:56.53:0,57,277	0/0:12,0:12:32.34:0,32,178	0/0:27,0:27:64.63:0,65,506	0/1:19,0:19:5.02:5,0,69	0/1:11,1:12:46.03:66,0,46	0/0:13,0:12:26.60:0,27,225	0/0:25,0:25:61.68:0,62,422	0/0:37,0:37:85.28:0,85,388	0/0:11,0:11:5.27:0,5,21	0/0:27,0:26:54.38:0,54,256	1/1:15,3:18:12.74:185,13,0	1/1:13,3:15:5.42:79,5,0	0/0:30,0:29:75.48:0,75,364	0/1:19,0:19:32.04:66,0,32	0/0:38,0:38:91.46:0,91,449	1/1:11,0:10:8.28:18,8,0
chr10	36689966	.	TTTC	T	3445.93	PASS	AB=0.970;AC=21;AF=0.375;AN=56;BaseQRankSum=-8.305;DP=612;FS=2.318;HRun=0;HaplotypeScore=225.0939;InbreedingCoeff=0.1720;MQ=52.65;MQ0=8;MQRankSum=4.089;QD=9.36;ReadPosRankSum=5.656;VQSLOD=2.5339;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:62.42:0,62,1215	1/1:12,0:12:22.83:109,23,0	0/0:26,0:15:30.95:0,31,542	0/0:17,0:8:22.13:0,22,307	0/1:28,0:28:7.01:7,0,236	0/0:14,0:14:36.59:0,37,685	0/0:22,0:21:54.18:0,54,898	0/1:38,0:38:87.79:88,0,245	0/0:11,0:11:16.66:0,17,144	0/0:30,0:30:87.29:0,87,1639	0/0:28,0:27:78.26:0,78,1440	1/1:8,11:20:1.47:659,1,0	0/1:27,0:25:7.42:145,0,7	0/1:12,0:12:42.11:69,0,42	0/0:27,0:27:78.27:0,78,1498	0/0:18,0:18:25.07:0,25,243	0/1:12,0:12:61.03:82,0,61	0/0:14,0:13:33.07:0,33,454	0/1:24,0:24:88.12:88,0,249	0/1:37,0:37:2.58:224,0,3	1/1:10,0:10:5.68:28,6,0	1/1:27,0:26:32.72:217,33,0	1/1:7,11:18:51.17:803,51,0	0/1:8,8:15:6.76:427,0,7	0/1:30,0:29:25.56:205,0,26	0/1:19,0:19:30.66:31,0,288	0/1:38,0:38:39.91:265,0,40	0/0:11,0:10:13.18:0,13,157
chr10	36689969	.	C	CTTTTCT	8431.43	PASS	AB=0.879;AC=29;AF=0.518;AN=56;BaseQRankSum=-10.056;DP=611;FS=2.853;HRun=0;HaplotypeScore=244.7294;InbreedingCoeff=-0.3934;MQ=50.45;MQ0=8;MQRankSum=-0.413;QD=15.47;ReadPosRankSum=1.025;VQSLOD=4.3913;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:26:85.18:85,0,494	0/1:12,0:12:66.32:89,0,66	0/0:23,0:12:22.73:0,23,256	0/0:15,0:7:19.83:0,20,180	1/1:2,15:27:42.13:962,42,0	0/1:15,0:14:99:120,0,119	0/1:21,0:20:99:105,0,450	0/1:37,0:38:99:715,0,200	1/1:1,5:15:24.08:484,24,0	0/1:31,0:31:99:100,0,533	0/1:29,0:28:99:174,0,468	0/0:15,0:19:1.12:0,1,318	0/1:17,0:24:99:429,0,144	0/1:6,0:12:72.34:191,0,72	0/1:31,0:31:99:171,0,258	1/1:2,9:20:33.10:544,33,0	0/1:5,0:12:12.39:424,0,12	0/1:14,0:13:6.78:7,0,326	0/1:18,0:24:99:209,0,371	0/1:25,0:36:99:543,0,176	0/0:9,0:9:5.48:0,5,24	0/1:16,0:24:98.63:316,0,99	0/1:16,0:17:55.70:56,0,94	0/1:14,0:15:27.71:28,0,44	0/1:19,0:28:99:362,0,220	1/1:1,10:21:57.19:1351,57,0	0/1:29,0:38:99:393,0,334	1/1:1,0:9:27.09:575,27,0
chr10	36689973	.	CT	C	2675.07	PASS	AB=0.852;AC=14;AF=0.250;AN=56;BaseQRankSum=8.694;DP=604;FS=4.165;HRun=4;HaplotypeScore=208.6438;InbreedingCoeff=-0.1490;MQ=48.22;MQ0=9;MQRankSum=-8.008;QD=8.33;ReadPosRankSum=5.177;VQSLOD=0.3701;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:24,2:26:99:297,0,156	0/0:12,0:12:10.53:0,11,33	0/0:19,0:9:20.71:0,21,214	0/0:15,0:7:20.73:0,21,209	0/0:25,0:25:43.23:0,43,386	1/1:11,4:14:3.75:323,4,0	0/1:10,13:22:99:275,0,177	0/0:37,0:37:75.99:0,76,518	0/0:16,0:16:26.11:0,26,224	0/1:22,9:31:99:553,0,139	0/1:24,6:29:99:521,0,164	0/1:16,3:19:65.82:66,0,136	0/0:24,1:23:7.76:0,8,119	0/0:10,0:10:9.38:0,9,68	0/1:22,9:31:99:481,0,152	0/0:19,0:19:33.85:0,34,283	0/0:12,0:12:27.57:0,28,244	0/1:12,3:14:99:103,0,171	0/1:17,7:24:99:112,0,145	0/0:36,0:35:31.55:0,32,181	0/0:9,0:9:0.94:0,1,2	0/1:27,0:26:0.29:0,0,65	0/0:15,0:15:19.84:0,20,243	0/1:15,0:14:0.81:1,0,152	0/1:26,3:28:35.59:36,0,92	0/0:21,0:21:59.84:0,60,637	0/1:32,4:36:53.66:54,0,81	0/0:12,0:11:32.72:0,33,332
chr10	36689989	.	TTTTCTTTTCTTTCTTTC	T	7949.52	PASS	AB=0.983;AC=23;AF=0.411;AN=56;BaseQRankSum=-4.896;DP=566;FS=7.962;HRun=0;HaplotypeScore=326.8354;InbreedingCoeff=0.7243;MQ=44.85;MQ0=10;MQRankSum=-3.473;QD=29.01;ReadPosRankSum=2.308;VQSLOD=2.3585;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:44.50:0,45,1492	1/1:11,0:11:17.88:178,18,0	0/0:8,0:3:4.25:0,4,38	0/0:9,0:2:2.98:0,3,22	0/0:23,0:23:41.76:0,42,1461	0/0:13,0:12:31.61:0,32,1045	0/0:20,0:20:39.10:0,39,1096	0/1:35,0:34:99:278,0,213	0/0:18,0:18:36.08:0,36,1401	0/0:29,0:29:40.87:0,41,2307	0/0:31,0:30:48.85:0,49,1852	1/1:10,6:16:48.14:1292,48,0	1/1:23,0:21:36.52:691,37,0	1/1:9,0:9:17.25:486,17,0	0/0:34,0:34:83.95:0,84,2516	0/0:16,0:16:25.81:0,26,791	0/0:15,0:15:40.38:0,40,1408	0/0:18,0:18:21:0,21,872	0/1:23,0:23:58.88:745,0,59	1/1:30,0:29:45.23:940,45,0	1/1:8,0:8:7.75:92,8,0	1/1:23,0:22:34.61:427,35,0	1/1:12,1:13:18.01:318,18,0	0/1:18,1:18:12.27:341,0,12	1/1:31,0:30:60.89:788,61,0	0/0:20,0:20:51.64:0,52,2443	1/1:33,0:33:77.08:1372,77,0	0/0:12,0:11:25.63:0,26,671
chr10	36689994	.	TTTTCTTTCTTTC	T	8052.14	PASS	AB=1.000;AC=31;AF=0.574;AN=54;BaseQRankSum=-1.732;DP=555;FS=7.559;HRun=0;HaplotypeScore=264.8705;InbreedingCoeff=0.5801;MQ=44.50;MQ0=11;MQRankSum=-6.270;QD=20.44;ReadPosRankSum=-1.560;VQSLOD=2.5038;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:3.41:0,3,605	1/1:9,1:10:6.01:121,6,0	./.	0/0:10,0:3:6.01:0,6,122	0/0:23,0:23:33.07:0,33,1052	0/0:12,0:11:8.83:0,9,497	0/1:19,0:19:0.37:0,0,487	1/1:31,0:30:26.92:414,27,0	0/0:19,0:19:30.10:0,30,1129	0/1:30,0:30:9.74:10,0,1100	0/1:29,0:28:38.44:38,0,756	1/1:15,0:15:38.94:1065,39,0	1/1:17,3:18:29.93:653,30,0	1/1:3,4:7:15.05:480,15,0	0/1:37,0:37:4.80:5,0,1070	0/0:17,0:17:18.06:0,18,673	0/0:15,0:15:34.06:0,34,1187	0/1:18,0:18:0.87:1,0,421	1/1:23,2:25:45.10:1224,45,0	1/1:13,16:28:30.05:853,30,0	1/1:7,0:6:3.01:76,3,0	1/1:12,10:21:9.03:315,9,0	1/1:14,0:14:1.95:174,2,0	1/1:18,0:17:8.29:249,8,0	1/1:25,3:27:33:862,33,0	0/0:18,0:18:39.08:0,39,1762	1/1:27,8:35:54.09:1511,54,0	0/0:12,0:11:12.02:0,12,442
chr10	36689998	.	C	CT	3575.44	PASS	AB=0.928;AC=30;AF=0.536;AN=56;BaseQRankSum=-0.213;DP=540;FS=7.733;HRun=4;HaplotypeScore=170.6921;InbreedingCoeff=-0.1301;MQ=44.78;MQ0=12;MQRankSum=-3.281;QD=7.84;ReadPosRankSum=-0.276;VQSLOD=-0.0415;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:21,5:26:44.58:299,45,0	0/0:8,0:8:20.99:0,21,221	0/0:6,0:3:2.80:0,3,13	0/1:8,0:4:6.28:6,0,54	0/1:20,3:23:99:254,0,204	1/1:6,6:11:21.90:232,22,0	1/1:16,5:21:31.30:249,31,0	0/1:26,0:25:39.46:39,0,369	0/1:19,1:20:10.20:10,0,270	1/1:20,10:31:68.23:566,68,0	1/1:19,9:27:62.07:479,62,0	0/1:16,0:16:9.63:10,0,133	0/1:18,0:16:13.27:13,0,229	0/1:7,0:7:8.50:9,0,52	1/1:22,15:37:79.16:668,79,0	0/1:19,0:19:5.32:5,0,166	0/1:15,2:17:18.36:18,0,340	1/1:15,2:17:12.07:117,12,0	0/0:23,0:23:3.96:0,4,258	0/0:26,0:25:24.78:0,25,335	0/1:3,2:4:17.96:18,0,61	0/0:20,0:19:39.92:0,40,356	0/1:13,0:13:8.22:8,0,107	0/1:18,1:18:40.11:40,0,88	0/1:27,0:26:49.58:50,0,388	0/1:14,6:19:99:245,0,181	0/1:34,0:34:56.43:56,0,414	0/1:6,5:10:83.96:184,0,84
chr10	36689999	.	TTTC	T	7868.76	PASS	AB=0.857;AC=31;AF=0.554;AN=56;BaseQRankSum=5.567;DP=534;FS=10.003;HRun=0;HaplotypeScore=169.1029;InbreedingCoeff=-0.2663;MQ=46.05;MQ0=11;MQRankSum=-4.829;QD=16.06;ReadPosRankSum=6.651;VQSLOD=3.6908;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,16:24:47.82:710,48,0	0/0:8,0:8:11.64:0,12,196	0/0:8,0:4:5.01:0,5,27	0/0:9,0:4:2.20:0,2,154	0/1:23,0:23:99:103,0,431	1/1:9,3:11:25.27:348,25,0	1/1:5,16:21:42.14:653,42,0	0/1:22,0:25:79.90:80,0,314	0/1:20,0:20:5.78:6,0,627	1/1:15,15:30:84.11:1239,84,0	1/1:11,17:27:75.23:1131,75,0	0/1:11,0:16:79.08:181,0,79	0/1:12,0:16:99:110,0,200	0/1:5,0:7:10.10:81,0,10	1/1:18,18:36:94.55:1364,95,0	0/0:19,0:19:11.56:0,12,419	0/1:17,0:17:24.35:24,0,716	1/1:5,12:17:33.11:543,33,0	0/1:11,0:22:99:208,0,150	0/1:26,0:25:99:117,0,239	0/1:4,0:3:25.89:26,0,59	0/1:19,0:18:20.16:20,0,285	0/1:6,0:13:35.98:36,0,111	0/1:10,0:18:78.19:78,0,88	0/1:16,0:26:99:182,0,356	0/1:21,0:20:99:150,0,684	0/1:20,0:34:99:293,0,353	0/1:10,0:10:99:186,0,178
chr10	36691312	.	CCG	C	4352.74	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=15.176;DP=715;FS=0.000;HRun=0;HaplotypeScore=118.5363;InbreedingCoeff=0.9862;MQ=87.64;MQ0=0;MQRankSum=-15.299;QD=38.18;ReadPosRankSum=1.182;VQSLOD=6.7479;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,111,2152	0/0:17,0:17:51.18:0,51,1035	0/0:35,1:37:87.58:0,88,1683	0/0:30,0:30:84.02:0,84,1363	1/1:2,18:20:52.72:716,53,0	0/0:22,0:22:66.23:0,66,1304	0/0:24,0:24:72.25:0,72,1461	0/0:22,0:22:66.22:0,66,1276	1/1:1,22:23:69.23:976,69,0	0/0:26,0:26:75.25:0,75,1477	0/0:28,0:28:81.28:0,81,1581	0/0:24,0:24:69.24:0,69,1372	0/0:19,0:19:57.20:0,57,1130	0/0:33,0:33:99:0,99,1991	0/0:29,0:29:87.30:0,87,1735	1/1:1,19:20:60.20:859,60,0	1/1:3,19:22:52.72:696,53,0	0/0:27,0:27:78.25:0,78,1539	0/0:21,0:21:60.20:0,60,1126	0/0:41,0:41:99:0,123,2438	0/0:35,0:35:99:0,105,2113	0/0:24,0:24:72.25:0,72,1446	0/0:23,0:23:66.19:0,66,1245	0/0:22,0:22:66.21:0,66,1286	0/0:22,0:22:66.23:0,66,1324	1/1:4,22:26:17.33:977,17,0	0/0:38,0:38:99:0,111,2162	1/1:1,2:3:9.03:130,9,0
chr10	36691319	.	ACAC	A	4770.41	PASS	AB=0.551;AC=11;AF=0.196;AN=56;BaseQRankSum=15.369;DP=730;FS=0.000;HRun=0;HaplotypeScore=132.2529;InbreedingCoeff=0.8734;MQ=89.00;MQ0=1;MQRankSum=-15.155;QD=42.59;ReadPosRankSum=1.899;VQSLOD=6.0663;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,120,2607	0/0:18,0:18:54.19:0,54,1267	0/0:34,0:33:96.51:0,97,1968	0/0:29,0:29:83.94:0,84,1560	1/1:2,17:19:50.93:757,51,0	0/0:23,0:23:69.23:0,69,1526	0/0:25,0:25:75.25:0,75,1714	0/0:22,0:22:66.23:0,66,1543	1/1:2,20:21:60.21:996,60,0	0/0:26,0:26:78.27:0,78,1825	0/0:28,0:28:84.27:0,84,1914	0/0:26,0:26:75.24:0,75,1670	0/0:19,0:19:57.19:0,57,1276	0/0:34,0:34:99:0,102,2445	0/0:29,0:29:87.29:0,87,1973	1/1:0,19:19:57.19:946,57,0	1/1:4,18:21:57.09:818,57,0	0/0:27,0:27:78.26:0,78,1823	0/0:21,0:21:60.19:0,60,1306	0/0:43,0:43:99:0,129,2984	0/0:35,0:35:99:0,105,2496	0/0:25,0:25:75.26:0,75,1756	0/0:25,0:25:72.25:0,72,1645	0/0:23,0:23:69.23:0,69,1585	0/0:22,0:22:66.22:0,66,1524	0/1:5,22:27:36.01:1104,0,36	0/0:41,0:41:99:0,123,2865	1/1:1,2:3:9.03:151,9,0
chr10	36691321	.	AC	A	3831.38	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=15.087;DP=741;FS=0.804;HRun=1;HaplotypeScore=108.0472;InbreedingCoeff=0.9527;MQ=88.76;MQ0=1;MQRankSum=-14.274;QD=33.91;ReadPosRankSum=2.015;VQSLOD=3.4602;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,114,1654	0/0:18,0:18:54.17:0,54,804	0/0:31,0:30:86.97:0,87,1200	0/0:32,0:32:85.63:0,86,1054	1/1:18,1:19:51.14:635,51,0	0/0:24,0:24:72.20:0,72,1015	0/0:26,0:26:75.69:0,76,1092	0/0:22,0:22:66.20:0,66,956	1/1:21,1:21:60.19:776,60,0	0/0:28,0:28:84.27:0,84,1220	0/0:29,0:29:81.25:0,81,1204	0/0:25,0:25:72.22:0,72,1052	0/0:19,0:19:57.15:0,57,795	0/0:35,0:35:99:0,105,1584	0/0:29,0:29:87.28:0,87,1279	1/1:20,0:20:60.19:774,60,0	1/1:18,4:21:53.87:654,54,0	0/0:27,0:27:78.25:0,78,1157	0/0:23,0:23:66.16:0,66,898	0/0:43,0:43:99:0,129,1930	0/0:36,0:36:99:0,108,1610	0/0:25,0:25:75.23:0,75,1112	0/0:28,0:28:75.21:0,75,1073	0/0:24,0:24:72.24:0,72,1057	0/0:22,0:22:66.17:0,66,930	1/1:24,3:27:3.21:873,3,0	0/0:41,0:41:99:0,123,1851	1/1:2,1:3:9.03:119,9,0
chr10	36691767	.	GT	G	5179.73	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=12.084;DP=692;FS=0.697;HRun=4;HaplotypeScore=66.8103;InbreedingCoeff=0.9979;MQ=77.70;MQ0=0;MQRankSum=-1.526;QD=33.63;ReadPosRankSum=1.457;VQSLOD=5.4761;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,126,1745	0/0:13,0:13:36.12:0,36,504	0/0:30,0:29:78.21:0,78,994	0/0:17,0:17:47.90:0,48,552	1/1:0,28:28:81.25:972,81,0	0/0:20,0:19:57.19:0,57,798	0/0:30,0:30:87.27:0,87,1199	0/0:29,0:29:87.29:0,87,1218	1/1:0,17:17:51.16:612,51,0	0/0:23,0:23:66.22:0,66,924	0/0:15,0:15:36.12:0,36,504	0/0:25,0:25:75.25:0,75,1048	0/0:27,0:27:78.26:0,78,1091	0/0:19,0:19:54.18:0,54,756	0/0:29,0:29:87.28:0,87,1200	1/1:1,27:28:78.24:936,78,0	1/1:1,38:39:99:1331,111,0	0/0:24,0:24:66.22:0,66,915	0/0:16,0:16:45.11:0,45,615	0/0:26,0:26:75.25:0,75,1050	0/0:27,0:27:78.26:0,78,1092	0/0:25,0:25:69.23:0,69,966	0/0:16,0:16:48.15:0,48,655	0/0:30,0:29:81.27:0,81,1134	0/0:26,0:26:78.25:0,78,1075	1/1:2,34:36:24.24:1113,24,0	0/0:25,0:25:69.20:0,69,928	1/1:0,6:6:18.06:216,18,0
chr10	36693239	.	ACATCAGCATCAGCATCAGCATCAG	A	10860.82	PASS	AB=1.000;AC=51;AF=0.944;AN=54;BaseQRankSum=1.119;DP=786;FS=3.398;HRun=0;HaplotypeScore=467.5183;InbreedingCoeff=0.4572;MQ=69.17;MQ0=3;MQRankSum=0.283;QD=14.98;ReadPosRankSum=4.172;VQSLOD=1.6325;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:39,0:37:41.88:853,42,0	1/1:16,0:16:17.99:280,18,0	0/1:28,0:23:10.36:10,0,36	0/0:49,0:46:15.04:0,15,230	1/1:16,9:25:1.35:33,1,0	1/1:15,0:15:15.04:379,15,0	1/1:33,0:33:15.04:334,15,0	1/1:32,0:32:0.94:2,1,0	1/1:34,0:33:45.15:1335,45,0	1/1:34,0:34:33.11:798,33,0	./.	1/1:28,0:28:41.68:466,42,0	1/1:34,0:33:21.02:428,21,0	1/1:34,0:34:26.88:241,27,0	1/1:42,0:42:51.16:1234,51,0	1/1:35,0:35:45.11:1197,45,0	1/1:25,0:24:14.97:236,15,0	1/1:16,0:16:18.06:457,18,0	1/1:14,0:14:6.02:80,6,0	1/1:27,0:27:29.97:276,30,0	1/1:56,0:51:41.84:481,42,0	1/1:32,0:32:27:363,27,0	1/1:22,0:22:15:175,15,0	1/1:23,0:23:12.04:189,12,0	1/1:22,0:22:5.51:52,6,0	1/1:19,13:32:27.08:594,27,0	1/1:20,0:20:14.84:242,15,0	1/1:6,0:6:6.02:126,6,0
chr10	36693270	.	C	CA	2607.01	PASS	AB=0.828;AC=22;AF=0.393;AN=56;BaseQRankSum=2.832;DP=616;FS=20.197;HRun=1;HaplotypeScore=179.8084;InbreedingCoeff=0.6305;MQ=44.25;MQ0=12;MQRankSum=-2.090;QD=10.03;ReadPosRankSum=2.449;VQSLOD=0.1282;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,1:32:72.21:0,72,916	1/1:3,8:11:1.31:163,1,0	0/0:22,0:6:11.41:0,11,167	0/0:35,0:15:39.07:0,39,461	0/0:17,0:17:14.99:0,15,175	0/0:8,0:8:21.07:0,21,273	0/0:25,0:23:57.16:0,57,707	0/1:17,0:15:57.39:78,0,57	0/0:38,0:37:93.25:0,93,1172	0/0:16,0:16:45.13:0,45,564	0/0:11,0:11:9.01:0,9,95	1/1:17,14:31:35.78:384,36,0	0/1:18,10:27:21.37:205,0,21	1/1:11,9:20:41.96:287,42,0	0/0:40,0:40:90.28:0,90,1154	0/0:38,0:38:93.30:0,93,1203	0/0:29,0:28:43.32:0,43,578	0/0:14,0:14:27.08:0,27,340	0/1:10,2:10:52.07:68,0,52	1/1:4,10:13:35.35:317,35,0	0/1:29,19:42:61.17:407,0,61	1/1:7,9:14:32.35:282,32,0	1/1:7,6:13:25.25:206,25,0	1/1:10,8:18:19.26:190,19,0	1/1:7,4:11:9.67:88,10,0	0/0:20,0:19:54.17:0,54,688	1/1:16,5:21:8.57:136,9,0	0/0:6,0:6:15.05:0,15,195
chr10	36693272	.	T	TAG	3837.91	PASS	AB=0.775;AC=19;AF=0.339;AN=56;BaseQRankSum=4.586;DP=612;FS=11.362;HRun=0;HaplotypeScore=182.6611;InbreedingCoeff=0.4546;MQ=44.11;MQ0=13;MQRankSum=-4.656;QD=14.82;ReadPosRankSum=4.189;VQSLOD=3.0171;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,1:33:72.06:0,72,944	0/1:3,8:11:4.90:253,0,5	0/0:21,0:5:12.03:0,12,167	0/0:36,0:14:33.10:0,33,473	0/0:18,0:18:20.56:0,21,244	0/0:7,0:7:20.95:0,21,245	0/0:24,0:22:54.04:0,54,703	0/1:17,0:15:16.82:17,0,106	0/0:38,0:37:92.67:0,93,1119	0/0:14,0:14:35.73:0,36,520	0/0:11,0:11:8.66:0,9,136	1/1:18,14:32:37.09:660,37,0	0/1:20,10:29:53.61:328,0,54	1/1:11,9:20:38.03:405,38,0	0/0:41,0:41:89.77:0,90,1125	0/0:38,0:38:93.64:0,94,1076	0/0:27,0:26:26.69:0,27,687	0/0:14,0:14:23.87:0,24,363	0/1:9,2:9:87.45:87,0,93	1/1:6,10:15:31.91:454,32,0	0/1:27,19:40:99:533,0,106	1/1:5,9:12:29.13:401,29,0	1/1:6,6:12:20.24:232,20,0	1/1:10,8:18:10.91:173,11,0	0/1:7,4:11:8.49:77,0,8	0/0:20,0:19:54.12:0,54,738	0/1:16,5:21:42.95:219,0,43	0/0:6,0:6:15.02:0,15,216
chr10	36693275	.	GCAT	G	4270.58	PASS	AB=0.990;AC=26;AF=0.464;AN=56;BaseQRankSum=9.169;DP=614;FS=12.595;HRun=0;HaplotypeScore=161.0290;InbreedingCoeff=-0.4733;MQ=44.81;MQ0=13;MQRankSum=-6.331;QD=8.49;ReadPosRankSum=9.669;VQSLOD=1.8803;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:35,0:30:99:135,0,238	0/1:10,1:11:23.49:222,0,23	0/1:26,0:4:11.63:12,0,41	0/0:35,0:11:18.04:0,18,252	0/0:19,0:19:13.56:0,14,162	1/1:7,0:7:8.96:82,9,0	0/1:21,0:19:59.44:59,0,254	0/0:18,0:16:45.15:0,45,658	0/1:35,0:34:99:336,0,315	0/1:16,0:16:69.40:69,0,156	0/0:11,0:11:6:0,6,67	0/1:35,0:35:78.10:500,0,78	0/1:31,2:32:99:228,0,370	0/1:18,1:19:99:381,0,138	0/1:39,0:39:99:236,0,333	0/1:37,0:37:99:306,0,456	0/0:28,0:27:18.77:0,19,408	0/1:14,0:14:55.14:55,0,229	0/1:13,0:11:57.10:57,0,318	1/1:17,0:16:8.10:421,8,0	0/1:46,0:40:99:433,0,268	1/1:13,0:11:9.20:247,9,0	0/1:11,0:11:49.30:164,0,49	0/1:17,0:17:30.68:88,0,31	0/1:11,0:11:67.17:67,0,109	0/1:19,0:18:53.24:53,0,191	0/1:22,0:22:99:106,0,357	0/1:6,0:6:12.20:12,0,139
chr10	36693276	.	C	CA	1485.12	PASS	AB=0.881;AC=13;AF=0.232;AN=56;BaseQRankSum=2.947;DP=613;FS=0.434;HRun=1;HaplotypeScore=160.6549;InbreedingCoeff=-0.1305;MQ=44.52;MQ0=14;MQRankSum=-2.199;QD=5.42;ReadPosRankSum=5.733;VQSLOD=0.5227;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:23,11:29:99:233,0,189	0/0:11,0:11:18.82:0,19,107	0/0:27,0:4:5.58:0,6,55	0/0:36,0:10:18.05:0,18,229	0/1:20,0:20:19.71:20,0,129	1/1:4,2:6:14.96:123,15,0	0/1:17,4:19:86.94:87,0,220	0/0:17,0:15:45.14:0,45,570	0/1:30,5:34:99:244,0,300	0/1:13,2:15:82.72:153,0,83	0/0:10,0:10:3.01:0,3,39	0/0:35,0:35:43.84:0,44,277	0/0:36,0:35:47.82:0,48,455	0/0:19,0:19:35.15:0,35,249	0/1:32,7:39:99:279,0,238	0/1:32,5:37:99:254,0,408	0/1:24,4:27:39.30:39,0,306	0/1:12,2:14:83.34:83,0,167	0/0:15,0:13:32.58:0,33,356	0/0:16,0:15:31.01:0,31,173	0/0:46,0:40:62.50:0,62,479	0/0:13,0:11:25.28:0,25,140	0/0:9,0:9:16.75:0,17,110	0/0:17,0:17:14.67:0,15,126	0/0:11,0:11:14.44:0,14,147	0/1:19,0:18:99:117,0,147	0/0:21,0:21:43.28:0,43,435	0/1:5,1:6:10.55:11,0,103
chr10	36693278	.	T	TAG	2248.23	PASS	AB=0.929;AC=21;AF=0.375;AN=56;BaseQRankSum=8.922;DP=615;FS=6.159;HRun=0;HaplotypeScore=162.0121;InbreedingCoeff=-0.4380;MQ=44.69;MQ0=13;MQRankSum=-4.515;QD=4.93;ReadPosRankSum=6.463;VQSLOD=2.2047;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:23,11:29:99:257,0,283	0/1:11,0:11:26.74:27,0,55	0/0:26,0:4:5.90:0,6,64	0/0:37,0:9:18.06:0,18,264	0/0:20,0:20:16.75:0,17,224	1/1:2,2:4:9.92:128,10,0	0/1:16,4:18:74.47:74,0,328	0/0:21,0:19:54.16:0,54,813	0/1:29,5:33:99:430,0,419	0/1:14,2:16:99:215,0,137	0/0:11,0:11:6.52:0,7,73	0/1:35,0:35:56.72:57,0,154	0/1:37,0:36:5.26:5,0,530	0/1:20,0:20:40.73:41,0,180	0/1:29,7:36:99:363,0,325	0/1:34,5:39:99:449,0,573	0/1:24,4:27:10.30:10,0,454	0/1:12,2:14:84.65:85,0,224	0/0:14,0:12:16.38:0,16,422	0/1:16,0:15:25.65:26,0,40	0/1:45,0:39:57.76:58,0,424	0/1:12,0:10:9.27:9,0,11	0/0:9,0:9:3.13:0,3,112	0/1:17,0:17:4.39:4,0,92	0/1:11,0:11:2.95:3,0,134	0/1:20,0:18:99:140,0,209	0/0:21,0:21:25.50:0,25,496	0/1:5,1:6:23.24:23,0,134
chr10	36693281	.	GCAT	G	2700.24	PASS	AB=0.940;AC=20;AF=0.357;AN=56;BaseQRankSum=9.336;DP=618;FS=3.811;HRun=0;HaplotypeScore=157.2175;InbreedingCoeff=-0.4466;MQ=44.53;MQ0=20;MQRankSum=-8.372;QD=6.31;ReadPosRankSum=3.199;VQSLOD=3.0182;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:31,2:28:99:296,0,262	0/1:13,0:13:19.61:20,0,138	1/1:30,0:3:2.04:6,2,0	0/0:34,0:4:5.98:0,6,64	0/0:20,0:20:15.92:0,16,224	0/1:3,1:4:11.92:130,0,12	0/1:18,3:19:99:106,0,378	0/0:22,0:20:60.20:0,60,896	0/1:25,10:34:99:591,0,451	0/1:15,2:16:99:197,0,223	0/0:12,0:11:9.03:0,9,119	0/1:32,0:32:54.26:54,0,184	0/0:39,0:38:11.38:0,11,709	0/1:17,0:17:61.17:61,0,186	0/1:27,5:32:99:451,0,299	0/1:32,8:40:99:556,0,618	0/1:28,0:27:9.45:9,0,385	0/1:11,1:12:99:121,0,227	0/0:16,0:14:33.56:0,34,515	0/1:16,0:15:14.65:15,0,123	0/1:50,0:42:1.03:1,0,572	0/1:14,0:11:18.41:18,0,106	0/1:7,0:7:18.94:19,0,121	0/0:17,0:17:11.12:0,11,115	0/0:10,0:10:3.54:0,4,165	0/1:21,0:19:99:176,0,206	0/0:20,0:20:29.65:0,30,521	0/1:6,0:6:24.71:25,0,121
chr10	36693350	.	G	GCAGCAT	11407.60	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=11.016;DP=802;FS=14.743;HRun=0;HaplotypeScore=180.8435;InbreedingCoeff=-0.7014;MQ=46.03;MQ0=47;MQRankSum=-13.510;QD=15.80;ReadPosRankSum=-7.703;VQSLOD=0.7146;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:38,0:32:29.49:29,0,312	0/1:16,0:16:99:456,0,153	0/0:39,0:6:2.97:0,3,20	0/0:41,0:11:9.03:0,9,142	0/1:11,0:11:45.26:45,0,145	0/1:14,0:14:99:217,0,198	0/1:33,0:32:99:208,0,342	0/1:33,0:25:86.55:101,0,87	0/1:32,0:31:99:571,0,223	0/1:26,0:25:99:593,0,217	0/1:9,0:9:49.22:49,0,93	1/1:8,46:56:72.25:2216,72,0	0/1:56,0:55:99:993,0,662	0/1:40,0:40:99:991,0,304	0/1:49,0:49:34.47:1199,0,34	0/1:47,0:46:99:864,0,439	0/1:26,0:25:99:160,0,202	0/1:11,0:11:40.94:41,0,113	0/1:28,0:17:99:301,0,249	0/1:17,0:17:99:361,0,179	0/1:53,0:48:20.06:20,0,348	0/1:9,0:8:56.78:113,0,57	1/1:7,5:10:3.01:88,3,0	1/1:4,26:32:17.73:557,18,0	0/1:21,0:20:99:394,0,180	0/1:17,0:14:99:182,0,267	0/1:29,0:29:99:551,0,275	0/1:6,0:6:83.67:104,0,84
chr10	36693368	.	A	ACAGCAT	21711.80	PASS	AB=1.000;AC=49;AF=0.875;AN=56;BaseQRankSum=-6.467;DP=901;FS=0.582;HRun=0;HaplotypeScore=148.4438;InbreedingCoeff=0.4080;MQ=53.84;MQ0=50;MQRankSum=-4.394;QD=26.54;ReadPosRankSum=5.655;VQSLOD=3.9713;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:16,33:47:12.04:210,12,0	1/1:5,12:18:26.89:830,27,0	0/0:40,0:10:3.44:0,3,123	0/0:43,0:22:48.99:0,49,679	1/1:12,3:14:26.98:369,27,0	1/1:8,15:27:12.04:397,12,0	1/1:10,14:23:12.04:397,12,0	1/1:34,0:25:63.09:963,63,0	1/1:7,21:27:30.10:991,30,0	1/1:7,24:33:72.14:1542,72,0	1/1:3,9:15:15.05:238,15,0	0/1:43,0:43:49.30:1255,0,49	1/1:19,33:53:57.19:1791,57,0	1/1:9,33:44:54.18:1716,54,0	1/1:6,43:51:66.22:2054,66,0	1/1:10,26:39:48.16:1523,48,0	1/1:25,3:27:45.05:740,45,0	1/1:11,2:13:24.04:478,24,0	1/1:16,14:26:59.45:1075,59,0	1/1:3,18:24:33.11:813,33,0	1/1:30,23:53:18.79:302,19,0	1/1:4,20:22:33.10:518,33,0	0/1:20,0:18:13.05:13,0,379	0/1:35,0:35:99:309,0,143	1/1:7,17:24:21.07:694,21,0	1/1:10,28:38:84.01:1309,84,0	1/1:9,17:27:30.10:990,30,0	1/1:2,5:8:6.02:195,6,0
chr10	36693565	.	AT	A	21015.06	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=1.210;DP=747;FS=0.695;HRun=5;HaplotypeScore=133.6003;InbreedingCoeff=0.9997;MQ=77.83;MQ0=0;MQRankSum=-9.260;QD=29.56;ReadPosRankSum=5.383;VQSLOD=3.0063;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,40:44:99:1194,108,0	1/1:2,18:20:51.14:578,51,0	0/0:24,0:24:55.40:0,55,706	0/0:12,0:12:32:0,32,378	1/1:0,27:27:78.22:884,78,0	1/1:0,34:34:93.26:1054,93,0	1/1:1,26:27:66.19:748,66,0	1/1:1,31:32:93.25:1044,93,0	1/1:1,21:22:60.17:680,60,0	1/1:2,31:33:90.23:1002,90,0	1/1:1,17:18:51.14:578,51,0	1/1:2,23:25:63.14:699,63,0	1/1:1,20:20:45.11:500,45,0	1/1:4,38:42:99:1190,105,0	1/1:3,33:36:99:1123,99,0	1/1:1,26:27:65.99:748,66,0	1/1:2,21:23:54.15:612,54,0	1/1:0,21:21:60.17:680,60,0	1/1:1,18:19:54.06:568,54,0	1/1:2,35:37:99:1173,105,0	1/1:1,28:29:78.22:885,78,0	1/1:0,23:23:63.18:714,63,0	1/1:2,22:24:60.17:681,60,0	1/1:0,21:21:54.10:597,54,0	1/1:3,27:30:69.20:783,69,0	1/1:1,32:33:96.19:1039,96,0	1/1:2,28:30:78.22:884,78,0	1/1:0,13:13:33.09:374,33,0
chr10	36694283	.	G	GA	14111.62	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-15.583;DP=664;FS=0.993;HRun=6;HaplotypeScore=59.2361;InbreedingCoeff=0.9992;MQ=74.18;MQ0=0;MQRankSum=-2.173;QD=33.05;ReadPosRankSum=0.401;VQSLOD=5.0071;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,45:47:99:1623,129,0	1/1:0,14:14:42.13:528,42,0	0/0:10,0:10:24.04:0,24,238	0/0:12,0:12:33.07:0,33,333	0/0:20,0:20:54.11:0,54,544	1/1:2,31:33:93.30:1170,93,0	1/1:1,17:18:48.15:604,48,0	1/1:1,34:35:99:1256,102,0	0/0:21,0:21:60.12:0,60,605	1/1:0,31:31:87.25:1079,87,0	1/1:3,16:19:45.10:546,45,0	0/0:21,0:21:60.13:0,60,612	1/1:5,23:28:66.20:819,66,0	1/1:3,18:21:48.15:604,48,0	1/1:2,43:45:99:1510,120,0	0/0:32,0:32:84.18:0,84,857	0/0:30,0:30:87.15:0,87,871	1/1:1,20:21:48.15:604,48,0	1/1:2,19:21:60.19:753,60,0	1/1:2,10:12:27.09:340,27,0	1/1:2,22:24:63.20:793,63,0	1/1:1,17:18:51.16:642,51,0	0/0:15,0:15:42.09:0,42,428	0/0:35,0:35:99:0,99,1002	1/1:1,13:14:36.12:453,36,0	0/0:31,0:31:87.20:0,87,888	1/1:3,23:26:63.20:791,63,0	0/0:10,0:10:24.05:0,24,245
chr10	36694506	.	AAG	A	1588.58	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=7.375;DP=476;FS=8.114;HRun=0;HaplotypeScore=60.4784;InbreedingCoeff=0.9850;MQ=75.27;MQ0=1;MQRankSum=0.317;QD=29.97;ReadPosRankSum=3.573;VQSLOD=4.7785;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:78.27:0,78,1362	0/0:4,0:4:12.03:0,12,184	0/0:22,0:22:54.18:0,54,848	0/0:10,0:10:23.34:0,23,329	0/0:18,0:18:48.16:0,48,851	0/0:25,0:25:75.24:0,75,1302	0/0:25,0:25:69.22:0,69,1187	0/0:22,0:22:51.16:0,51,848	0/0:8,0:8:21.07:0,21,372	0/0:14,0:14:30.09:0,30,502	0/0:13,0:13:36.12:0,36,639	1/1:2,15:17:42.14:577,42,0	0/0:16,0:16:48.16:0,48,851	0/0:13,0:13:36.12:0,36,638	0/0:16,0:16:36.11:0,36,610	0/0:17,0:17:51.16:0,51,869	0/0:22,0:22:66.23:0,66,1154	0/0:32,0:32:90.31:0,90,1578	0/0:16,0:16:39.10:0,39,635	0/0:13,0:13:39.13:0,39,682	0/0:23,0:23:69.24:0,69,1200	0/0:15,0:15:42.14:0,42,744	1/1:0,11:10:27.09:371,27,0	1/1:2,23:25:57.17:783,57,0	0/0:17,0:17:48.15:0,48,810	0/0:10,0:10:24.08:0,24,424	0/0:16,0:16:45.15:0,45,798	0/0:9,0:9:27.09:0,27,465
chr10	36694706	.	AG	A	1786.85	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=7.112;DP=309;FS=2.697;HRun=5;HaplotypeScore=29.7067;InbreedingCoeff=0.9173;MQ=66.96;MQ0=2;MQRankSum=0.482;QD=26.67;ReadPosRankSum=1.531;VQSLOD=2.4019;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:6:15.03:0,15,187	0/0:3,0:3:9.03:0,9,123	0/0:4,0:3:9.03:0,9,115	0/0:8,0:6:8.84:0,9,96	1/1:0,6:6:18.05:204,18,0	0/0:5,0:5:15.05:0,15,205	0/0:37,0:36:99:0,105,1404	0/0:7,0:7:18.06:0,18,246	1/1:1,10:11:27.08:306,27,0	0/0:11,0:11:33.11:0,33,441	0/0:5,0:5:12.04:0,12,164	0/0:16,0:16:48.16:0,48,647	0/0:11,0:11:33.11:0,33,451	0/0:18,0:18:51.16:0,51,681	0/0:10,0:10:27.09:0,27,368	1/1:0,7:7:21.06:238,21,0	1/1:2,24:25:66.19:749,66,0	0/0:32,0:32:78.26:0,78,1065	0/0:4,0:4:12.04:0,12,164	0/0:6,0:6:15.05:0,15,206	0/0:12,0:12:33.11:0,33,451	0/0:5,0:5:15.05:0,15,205	0/0:6,0:6:18.06:0,18,245	0/0:21,0:21:60.20:0,60,816	0/0:4,0:4:9.03:0,9,123	1/1:3,10:13:30.08:337,30,0	0/0:11,0:11:27.09:0,27,368	1/1:0,4:4:12.03:136,12,0
chr10	36695202	.	G	GT	2236.49	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-9.571;DP=663;FS=0.000;HRun=4;HaplotypeScore=63.4242;InbreedingCoeff=0.9955;MQ=73.14;MQ0=0;MQRankSum=-2.513;QD=36.07;ReadPosRankSum=0.866;VQSLOD=3.8839;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:90.26:0,90,1021	0/0:11,0:11:33.09:0,33,374	0/0:18,0:18:51.10:0,51,551	0/0:17,0:17:16.22:0,16,360	0/0:45,0:45:99:0,129,1438	0/0:28,0:28:81.22:0,81,908	0/0:14,0:14:42.10:0,42,466	0/0:38,0:38:99:0,102,1157	0/0:21,0:21:60.17:0,60,680	0/0:20,0:20:60.17:0,60,681	0/0:26,0:26:75.19:0,75,836	1/1:0,27:27:81.27:1107,81,0	0/0:26,0:26:75.21:0,75,850	0/0:27,0:27:78.12:0,78,849	0/0:22,0:22:66.14:0,66,717	0/0:27,0:27:78.22:0,78,885	0/0:30,0:30:87.22:0,87,974	0/0:19,0:19:54.15:0,54,612	0/0:14,0:14:36.10:0,36,408	0/0:29,0:29:84.24:0,84,952	0/0:13,0:13:39.11:0,39,441	0/0:17,0:17:48.12:0,48,533	1/1:1,16:17:45.15:616,45,0	1/1:1,17:18:48.16:657,48,0	0/0:25,0:24:72.21:0,72,817	0/0:23,0:23:69.19:0,69,775	0/0:37,0:37:99:0,102,1157	0/0:22,0:22:66.19:0,66,748
chr10	36696448	.	T	TA	1182.54	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-8.454;DP=664;FS=2.716;HRun=9;HaplotypeScore=82.6186;InbreedingCoeff=0.9759;MQ=77.06;MQ0=0;MQRankSum=-3.908;QD=19.39;ReadPosRankSum=0.805;VQSLOD=4.1803;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:31:67.48:0,67,557	0/0:12,0:12:32.97:0,33,280	0/0:11,0:11:26.91:0,27,221	0/0:18,0:18:32.70:0,33,344	0/0:30,0:30:80.93:0,81,694	0/0:24,0:24:56.97:0,57,495	0/0:10,0:11:29.01:0,29,236	0/0:23,0:23:50.94:0,51,432	0/0:25,0:25:65.97:0,66,569	0/0:28,0:28:74.98:0,75,649	0/0:29,0:29:77.97:0,78,677	1/1:4,14:18:9.10:363,9,0	0/0:28,0:28:68.94:0,69,591	0/0:24,2:26:38.79:0,39,563	0/0:30,0:30:71.94:0,72,618	0/0:23,0:23:50.97:0,51,439	0/0:20,0:20:54.07:0,54,443	0/0:13,0:13:32.96:0,33,282	0/0:22,0:22:59.97:0,60,516	0/0:30,0:30:89.57:0,90,749	0/0:21,0:21:56.98:0,57,492	0/0:31,0:31:55.77:0,56,648	1/1:4,21:25:47.94:517,48,0	1/1:2,16:18:19.07:439,19,0	0/0:34,0:34:86.02:0,86,745	0/0:35,0:35:89.68:0,90,755	0/0:33,0:32:89.95:0,90,774	0/0:15,0:15:44.92:0,45,382
chr10	36697130	.	C	CTA	38.03	PASS	AB=0.654;AC=1;AF=0.019;AN=52;BaseQRankSum=0.016;DP=371;FS=12.963;HRun=0;HaplotypeScore=76.5299;InbreedingCoeff=0.1762;MQ=33.00;MQ0=75;MQRankSum=1.841;QD=2.24;ReadPosRankSum=0.308;VQSLOD=0.6071;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:14:14.61:0,15,148	0/0:6,0:3:2.79:0,3,19	./.	./.	0/0:18,0:17:3.88:0,4,28	0/0:23,0:15:17.70:0,18,141	0/0:24,0:20:23.19:0,23,170	0/0:19,0:16:47.49:0,47,322	0/0:16,0:14:14.36:0,14,80	0/1:8,7:13:5.81:111,0,6	0/0:8,0:7:5.94:0,6,43	0/0:15,0:12:14.08:0,14,115	0/0:6,0:4:5.87:0,6,35	0/0:12,0:8:5.74:0,6,68	0/0:22,0:21:10.62:0,11,76	0/0:15,0:13:19.77:0,20,116	0/0:16,0:8:9.96:0,10,109	0/0:8,0:4:11.94:0,12,91	0/0:6,0:6:17.80:0,18,122	0/0:13,0:13:3.81:0,4,28	0/0:12,0:5:0:0,0,0	0/0:13,0:9:0:0,0,0	0/0:13,0:11:3:0,3,34	0/0:23,0:17:5.82:0,6,76	0/0:10,0:6:2.97:0,3,20	0/0:14,0:14:35.78:0,36,220	0/0:11,0:9:6.34:0,6,50	0/0:13,0:7:12.60:0,13,68
chr10	36697141	.	TCACACACACA	T	1110.56	PASS	AB=0.825;AC=12;AF=0.240;AN=50;BaseQRankSum=4.475;DP=405;FS=1.098;HRun=0;HaplotypeScore=103.7231;InbreedingCoeff=0.2332;MQ=32.90;MQ0=74;MQRankSum=-3.019;QD=8.17;ReadPosRankSum=1.669;VQSLOD=2.0828;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:16:8.94:0,9,356	0/0:9,0:6:0.47:0,0,1	./.	./.	1/1:7,6:14:3.95:86,4,0	0/0:24,0:17:12.51:0,13,487	0/0:22,0:17:20.96:0,21,723	0/0:29,0:26:32.54:0,33,920	0/1:7,0:14:43.83:229,0,44	0/0:21,0:17:21.07:0,21,745	0/0:8,0:7:6.02:0,6,242	0/1:14,0:12:43.23:43,0,120	0/0:7,0:5:3.01:0,3,62	0/0:13,0:9:0:0,0,0	0/0:22,0:21:18.06:0,18,728	0/1:6,0:10:77.62:309,0,78	0/1:17,0:10:75.86:76,0,87	0/0:10,0:6:15.05:0,15,569	0/0:13,0:13:13.14:0,13,287	0/0:11,0:11:1.81:0,2,122	0/0:15,0:8:3.01:0,3,125	./.	0/1:8,4:10:0:0,0,0	1/1:24,0:18:2.64:56,3,0	0/0:13,0:7:6.02:0,6,161	1/1:8,5:14:14.03:397,14,0	0/0:14,0:11:12.51:0,13,429	0/1:11,0:6:2.80:48,0,3
chr10	36697244	.	ACATGCTAACAAC	A	5817.36	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=10.828;DP=565;FS=5.257;HRun=0;HaplotypeScore=229.1381;InbreedingCoeff=0.9665;MQ=89.61;MQ0=0;MQRankSum=-11.482;QD=89.50;ReadPosRankSum=1.138;VQSLOD=4.4662;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:48.16:0,48,2748	0/0:7,0:7:21.07:0,21,1255	0/0:28,0:28:72.25:0,72,3751	0/0:20,0:20:41.80:0,42,1856	0/0:29,0:29:81.28:0,81,4861	0/0:33,0:33:99:0,99,5615	0/0:15,0:15:42.11:0,42,2382	0/0:28,0:28:63.22:0,63,3644	0/0:23,0:23:60.21:0,60,3504	0/0:18,0:18:51.18:0,51,2811	0/0:21,0:21:60.21:0,60,3588	1/1:2,23:25:66.23:2424,66,0	0/0:19,0:19:57.18:0,57,3245	0/0:24,0:24:72.25:0,72,3924	0/0:27,0:27:69.74:0,70,4527	0/0:18,0:18:48.16:0,48,2790	0/0:18,0:18:48.16:0,48,2750	0/0:14,0:14:42.14:0,42,2255	0/0:15,0:15:39.13:0,39,2104	0/0:22,0:22:66.23:0,66,3878	0/0:20,0:20:57.20:0,57,3133	0/0:15,0:15:42.14:0,42,2403	1/1:1,29:30:84.29:3064,84,0	1/1:4,6:10:9.03:329,9,0	0/0:18,0:18:54.19:0,54,3249	0/0:27,0:27:78.26:0,78,4349	0/0:20,0:20:60.21:0,60,3348	0/0:5,0:5:12.04:0,12,730
chr10	36697780	.	CAG	C	17707.04	PASS	AB=0.870;AC=35;AF=0.625;AN=56;BaseQRankSum=15.289;DP=764;FS=4.124;HRun=0;HaplotypeScore=118.8565;InbreedingCoeff=0.9215;MQ=88.93;MQ0=1;MQRankSum=-3.521;QD=35.84;ReadPosRankSum=3.346;VQSLOD=7.2049;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,43:44:99:1590,108,0	1/1:0,9:9:15.05:220,15,0	0/0:38,0:38:63.05:0,63,1626	0/0:31,0:31:84.14:0,84,1365	0/0:32,0:32:90.28:0,90,1616	1/1:1,31:32:87.29:1281,87,0	1/1:1,20:21:51.17:751,51,0	1/1:3,26:29:75.24:1083,75,0	0/0:24,0:24:66.23:0,66,1215	1/1:1,25:26:75.21:1077,75,0	1/1:3,19:22:51.17:751,51,0	0/0:23,0:23:69.19:0,69,1197	1/1:1,21:22:54.18:788,54,0	1/1:1,20:21:54.18:794,54,0	1/1:1,42:43:99:1678,114,0	0/0:29,0:29:84.29:0,84,1559	0/0:30,0:30:87.30:0,87,1629	1/1:0,25:25:63.21:928,63,0	1/1:1,19:20:57.16:798,57,0	1/1:0,34:34:75.25:1104,75,0	1/1:0,26:26:60.20:883,60,0	1/1:0,25:25:60.20:883,60,0	0/0:17,0:17:45.15:0,45,827	0/0:26,0:26:75.26:0,75,1378	1/1:2,35:36:99:1458,99,0	0/1:17,3:20:75.36:75,0,809	1/1:0,38:37:99:1565,108,0	0/0:20,0:20:60.21:0,60,1123
chr10	36698704	.	T	TA	7365.98	PASS	AB=1.000;AC=27;AF=0.482;AN=56;BaseQRankSum=-15.549;DP=604;FS=1.830;HRun=8;HaplotypeScore=53.8013;InbreedingCoeff=0.9425;MQ=66.67;MQ0=1;MQRankSum=0.779;QD=26.88;ReadPosRankSum=0.626;VQSLOD=5.4944;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:21:60.03:0,60,549	1/1:1,7:8:21.06:242,21,0	0/0:12,0:12:24.88:0,25,211	0/1:11,0:11:4.95:5,0,143	0/0:34,0:34:90.03:0,90,824	0/0:23,0:23:66.02:0,66,598	0/0:19,0:19:54.03:0,54,494	1/1:3,22:25:63.08:677,63,0	0/0:17,0:17:45.02:0,45,412	0/0:39,0:38:96:0,96,868	0/0:29,0:29:84.04:0,84,769	1/1:2,27:29:78.23:900,78,0	1/1:4,17:21:36.11:415,36,0	1/1:1,14:15:42.12:485,42,0	0/0:21,0:21:60.02:0,60,544	0/0:21,0:21:51.02:0,51,467	0/0:19,0:19:54.03:0,54,494	0/0:24,0:24:57.01:0,57,522	1/1:4,6:10:18.05:208,18,0	1/1:3,28:31:56.78:908,57,0	1/1:1,7:8:18.05:208,18,0	1/1:0,16:16:42.12:485,42,0	1/1:5,23:29:66.03:742,66,0	1/1:1,8:9:24.07:277,24,0	1/1:2,28:30:75.22:866,75,0	0/0:27,0:26:75.04:0,75,687	1/1:3,29:32:38.34:949,38,0	0/0:23,0:23:63.03:0,63,577
chr10	36699536	.	CT	C	5863.19	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=13.497;DP=652;FS=1.480;HRun=2;HaplotypeScore=64.7260;InbreedingCoeff=0.9831;MQ=72.24;MQ0=0;MQRankSum=-2.092;QD=34.29;ReadPosRankSum=2.716;VQSLOD=5.2172;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,39:41:99:1363,105,0	0/0:11,0:11:33.07:0,33,452	0/0:26,0:25:69.16:0,69,942	0/0:21,1:20:6.76:0,7,557	0/0:36,0:36:99:0,102,1469	1/1:0,35:35:99:1324,102,0	1/1:0,13:13:30.10:390,30,0	0/0:38,0:38:99:0,114,1680	0/0:18,0:18:51.17:0,51,763	1/1:1,19:20:57.17:727,57,0	1/1:2,16:18:51.12:643,51,0	0/0:22,0:22:66.22:0,66,973	0/0:20,0:20:60.18:0,60,859	0/0:15,0:15:45.14:0,45,651	1/1:0,20:20:54.18:701,54,0	0/0:20,0:20:60.19:0,60,878	0/0:33,0:33:93.26:0,93,1334	1/1:2,22:24:37.89:717,38,0	0/0:16,0:16:48.14:0,48,681	0/0:17,0:17:51.13:0,51,716	0/0:21,0:21:57.19:0,57,851	0/0:16,0:16:48.12:0,48,675	0/0:17,0:17:51.17:0,51,764	0/0:26,0:26:75.24:0,75,1103	0/0:36,0:36:99:0,108,1600	0/0:28,2:30:25.45:0,25,1115	0/0:24,0:23:72.24:0,72,1075	0/0:17,0:17:51.17:0,51,759
chr10	36700543	.	CCTAT	C	8690.95	PASS	AB=0.909;AC=46;AF=0.852;AN=54;BaseQRankSum=5.587;DP=531;FS=4.334;HRun=0;HaplotypeScore=89.3017;InbreedingCoeff=0.6785;MQ=74.96;MQ0=0;MQRankSum=0.382;QD=18.93;ReadPosRankSum=-0.261;VQSLOD=4.2292;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,15:28:27.09:429,27,0	1/1:1,5:6:15.05:238,15,0	0/0:13,0:10:3.01:0,3,70	./.	1/1:6,14:20:27.09:428,27,0	1/1:5,10:15:12.04:191,12,0	1/1:8,1:9:9.03:143,9,0	1/1:29,0:29:12.03:167,12,0	1/1:7,15:22:33.11:524,33,0	1/1:7,18:25:54.17:825,54,0	1/1:8,13:22:27.09:406,27,0	0/0:22,0:22:33.11:0,33,780	1/1:7,7:14:21.07:333,21,0	1/1:9,13:22:27.09:429,27,0	1/1:11,13:24:27.09:409,27,0	1/1:9,19:28:42.14:667,42,0	1/1:8,8:16:14.62:369,15,0	0/1:7,2:9:13.91:131,0,14	1/1:8,6:14:18.04:261,18,0	1/1:13,16:29:36.12:572,36,0	1/1:5,12:17:24.08:381,24,0	1/1:6,8:14:12.04:190,12,0	0/1:18,0:18:0.44:0,0,879	0/0:16,0:16:27.09:0,27,639	1/1:5,11:16:30.10:476,30,0	1/1:8,14:23:42.07:551,42,0	1/1:12,13:25:27.09:429,27,0	1/1:9,5:14:9.03:143,9,0
chr10	36700741	.	C	CT	3892.61	PASS	AB=0.864;AC=35;AF=0.625;AN=56;BaseQRankSum=3.876;DP=328;FS=20.427;HRun=10;HaplotypeScore=51.7681;InbreedingCoeff=0.7765;MQ=63.97;MQ0=0;MQRankSum=-5.006;QD=17.53;ReadPosRankSum=-2.021;VQSLOD=2.0194;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,5:11:15.51:162,16,0	1/1:0,1:1:2.97:20,3,0	0/1:10,0:10:2.15:2,0,44	0/0:10,0:9:20.33:0,20,155	0/0:14,0:14:35.94:0,36,296	1/1:4,3:7:8.98:84,9,0	1/1:3,2:5:11.99:115,12,0	0/1:11,13:24:1.34:382,0,1	0/0:11,0:11:20.94:0,21,169	1/1:6,10:16:39.08:399,39,0	1/1:3,5:8:15.03:153,15,0	0/0:14,0:14:32.92:0,33,265	1/1:3,5:8:24:225,24,0	1/1:4,9:13:30.04:307,30,0	1/1:6,9:15:39.05:391,39,0	0/0:11,0:11:29.96:0,30,246	0/0:21,0:21:53.91:0,54,443	1/1:10,5:15:21:203,21,0	1/1:9,8:18:32.88:318,33,0	1/1:6,7:13:2.42:225,2,0	1/1:2,3:5:9.02:96,9,0	1/1:2,4:7:14.83:130,15,0	0/0:7,0:7:17.97:0,18,148	0/0:6,0:6:11.98:0,12,99	1/1:3,7:9:21.04:217,21,0	0/1:16,1:17:2.03:2,0,192	1/1:4,13:18:44.60:462,45,0	0/0:12,0:12:23.95:0,24,197
chr10	36700764	.	CT	C	3473.77	PASS	AB=0.875;AC=36;AF=0.643;AN=56;BaseQRankSum=6.141;DP=324;FS=28.463;HRun=11;HaplotypeScore=49.9461;InbreedingCoeff=0.7856;MQ=60.12;MQ0=10;MQRankSum=-3.658;QD=16.54;ReadPosRankSum=-1.774;VQSLOD=2.0203;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,5:7:17.29:142,17,0	1/1:0,1:1:3:25,3,0	0/0:12,0:10:19.83:0,20,179	0/1:8,2:8:39.78:40,0,58	0/0:15,0:15:42.03:0,42,416	1/1:2,10:11:26.95:222,27,0	1/1:0,4:5:14.02:104,14,0	1/1:9,18:27:31.12:451,31,0	0/0:8,0:8:21.05:0,21,224	1/1:2,12:14:35.96:296,36,0	1/1:0,7:7:17.98:148,18,0	0/0:12,0:12:33:0,33,319	1/1:2,10:12:3.33:195,3,0	1/1:5,9:14:26.93:219,27,0	1/1:2,7:9:23.90:189,24,0	0/0:13,0:13:36.05:0,36,372	0/0:24,1:23:38.34:0,38,585	1/1:3,7:10:20.92:166,21,0	1/1:5,11:15:34.98:277,35,0	1/1:2,12:15:40.02:307,40,0	1/1:1,3:4:11.97:96,12,0	1/1:1,4:5:14.97:120,15,0	0/0:9,0:9:18.04:0,18,190	0/0:6,0:5:1.68:0,2,57	1/1:3,7:10:26.83:207,27,0	0/1:10,1:11:0.58:1,0,194	1/1:6,11:17:32.90:270,33,0	0/0:12,0:12:29.89:0,30,293
chr10	36701008	.	GTA	G	186.09	PASS	AC=12;AF=0.667;AN=18;BaseQRankSum=-1.709;DP=149;FS=0.000;HRun=0;HaplotypeScore=13.6470;MQ=14.84;MQ0=110;MQRankSum=-0.766;QD=4.77;ReadPosRankSum=-1.355;VQSLOD=1.3996;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	1/1:0,1:1:3.01:38,3,0	./.	./.	1/1:4,0:4:2.96:19,3,0	./.	./.	./.	./.	0/0:3,0:2:3.01:0,3,49	0/0:6,0:5:3.01:0,3,49	./.	1/1:2,1:1:3.01:37,3,0	./.	./.	./.	1/1:20,0:1:2.84:14,3,0	./.	./.	1/1:5,0:5:2.97:20,3,0	./.	./.	./.	./.	1/1:0,5:4:12.04:150,12,0	./.	./.	0/0:6,0:4:12:0,12,106
chr10	36701214	.	AT	A	320.27	PASS	AB=0.776;AC=10;AF=0.200;AN=50;BaseQRankSum=0.843;DP=300;FS=1.074;HRun=9;HaplotypeScore=32.1917;InbreedingCoeff=0.3414;MQ=25.81;MQ0=84;MQRankSum=-1.765;QD=4.64;ReadPosRankSum=2.839;VQSLOD=-0.5986;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:15:42.12:0,42,484	0/0:4,0:2:6.02:0,6,69	./.	./.	1/1:5,7:9:12:109,12,0	0/0:10,0:3:9.03:0,9,104	0/0:10,0:5:12.04:0,12,138	0/0:15,0:5:9.03:0,9,104	0/1:2,4:5:22.57:70,0,23	0/0:10,0:6:18.05:0,18,208	0/0:12,0:6:12.04:0,12,138	0/0:11,0:6:12.03:0,12,136	0/0:17,0:12:30:0,30,312	0/0:15,0:5:15:0,15,155	0/0:15,0:6:12.04:0,12,138	0/1:7,2:5:39.85:40,0,89	0/1:4,3:7:32.20:64,0,32	0/0:7,0:4:11.90:0,12,118	0/1:14,1:3:18.44:18,0,60	0/0:16,0:5:9.03:0,9,104	0/0:13,0:9:8.66:0,9,177	./.	0/0:5,0:1:3.01:0,3,35	0/0:10,0:5:15.04:0,15,173	0/0:15,0:12:30.09:0,30,346	1/1:2,2:2:6:55,6,0	0/0:25,0:15:23.09:0,23,289	1/1:10,4:4:12.01:110,12,0
chr10	36701469	.	T	TA	2861.40	PASS	AB=0.909;AC=19;AF=0.339;AN=56;BaseQRankSum=0.425;DP=395;FS=10.849;HRun=9;HaplotypeScore=60.9671;InbreedingCoeff=0.8626;MQ=39.90;MQ0=23;MQRankSum=-1.306;QD=22.53;ReadPosRankSum=-0.095;VQSLOD=3.8684;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:27.47:0,27,358	0/0:3,0:3:9:0,9,78	0/0:6,0:5:12:0,12,104	0/0:3,0:3:8.95:0,9,70	1/1:3,22:23:60.16:663,60,0	0/0:21,0:20:56.95:0,57,487	0/0:10,0:5:15:0,15,130	0/0:24,0:14:38.99:0,39,338	1/1:2,9:11:27.07:298,27,0	0/0:28,0:26:71.92:0,72,617	0/0:20,0:21:55.89:0,56,462	1/1:1,11:12:33.09:365,33,0	0/0:13,0:13:19.96:0,20,232	0/0:17,0:15:35.94:0,36,306	0/0:12,0:10:23.96:0,24,202	1/1:4,8:12:21.06:232,21,0	1/1:3,9:11:23.98:249,24,0	0/1:9,1:7:21.16:21,0,66	0/0:13,0:10:25.97:0,26,202	0/0:9,0:7:18:0,18,156	0/0:8,0:6:15:0,15,130	0/0:10,0:9:26.96:0,27,228	1/1:3,10:10:27.07:298,27,0	1/1:1,1:2:3.01:33,3,0	0/0:23,0:20:56.99:0,57,494	1/1:1,19:20:56.99:611,57,0	0/0:23,0:22:61.99:0,62,519	1/1:0,9:9:27.07:299,27,0
chr10	36701673	.	AACAT	A	105.72	PASS	AB=0.942;AC=4;AF=0.111;AN=36;BaseQRankSum=2.593;DP=525;FS=0.000;HRun=0;HaplotypeScore=18.5928;InbreedingCoeff=0.0339;MQ=10.89;MQ0=407;MQRankSum=-1.425;QD=1.34;ReadPosRankSum=0.841;VQSLOD=0.8215;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	0/1:26,1:3:49.02:49,0,107	0/0:18,0:2:3.01:0,3,82	./.	./.	0/0:18,0:5:9.03:0,9,245	0/0:32,0:6:15.05:0,15,410	0/0:20,0:6:3.01:0,3,72	0/0:18,0:2:3.01:0,3,82	0/0:17,0:5:9.03:0,9,199	0/0:19,0:4:12.04:0,12,327	0/0:19,0:3:9.03:0,9,245	0/0:13,0:2:6.02:0,6,164	0/0:31,0:1:3.01:0,3,80	./.	./.	0/1:31,3:9:92.02:92,0,466	./.	0/0:11,1:1:3.01:0,3,82	1/1:17,1:3:3.01:58,3,0	./.	0/0:17,0:6:18.06:0,18,486	0/0:29,0:3:9.03:0,9,246	0/0:23,0:6:15.05:0,15,409	0/0:12,0:1:3.01:0,3,82
chr10	36703018	.	CT	C	1224.76	PASS	AC=16;AF=0.533;AN=30;BaseQRankSum=6.524;DP=1031;FS=0.000;HRun=4;HaplotypeScore=19.7608;InbreedingCoeff=0.7841;MQ=8.64;MQ0=876;MQRankSum=-0.710;QD=5.30;ReadPosRankSum=1.676;VQSLOD=-0.1980;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:1:3.01:0,3,30	./.	./.	./.	./.	1/1:7,7:6:15.04:172,15,0	1/1:20,2:2:6.02:69,6,0	1/1:34,2:2:5.99:56,6,0	0/0:35,0:8:24.04:0,24,304	1/1:32,5:2:3.01:35,3,0	./.	0/0:16,0:8:21.07:0,21,293	1/1:9,9:8:21.06:241,21,0	1/1:20,11:10:27.08:309,27,0	1/1:9,7:7:15.04:172,15,0	0/0:29,0:7:21.04:0,21,272	0/0:86,0:4:9.02:0,9,112	./.	./.	./.	./.	./.	0/0:54,0:2:3.01:0,3,42	./.	./.	0/0:57,0:7:21.03:0,21,272	1/1:46,11:11:27.08:309,27,0	./.
chr10	36703716	.	CCT	C	37.23	PASS	AC=6;AF=0.300;AN=20;BaseQRankSum=1.521;DP=609;FS=0.000;HRun=0;HaplotypeScore=9.8448;InbreedingCoeff=0.5774;MQ=12.46;MQ0=391;MQRankSum=0.691;QD=0.81;ReadPosRankSum=1.521;VQSLOD=0.6741;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:23,5:4:3.01:43,3,0	./.	./.	./.	./.	1/1:5,2:3:3.01:43,3,0	./.	./.	0/0:26,0:9:6.02:0,6,110	./.	./.	0/0:28,0:9:18.06:0,18,329	0/0:13,0:7:12.04:0,12,219	0/0:27,0:8:3.01:0,3,55	1/1:3,8:8:3.01:43,3,0	./.	./.	./.	0/0:22,0:5:15.05:0,15,275	./.	0/0:52,0:17:12.04:0,12,219	./.	./.	./.	./.	0/0:31,0:5:15.05:0,15,275	./.	./.
chr10	36704962	.	A	AATATATATAT	2172.56	PASS	AC=18;AF=0.750;AN=24;BaseQRankSum=-2.051;DP=122;FS=0.000;HRun=0;HaplotypeScore=42.1153;InbreedingCoeff=0.4926;MQ=91.59;MQ0=2;MQRankSum=-1.061;QD=33.95;ReadPosRankSum=1.108;VQSLOD=2.5467;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:4:3.01:0,3,67	./.	0/0:16,0:13:17.09:0,17,383	0/0:11,0:6:3.90:0,4,47	./.	1/1:8,0:7:12.04:432,12,0	1/1:1,1:2:3.01:152,3,0	1/1:18,0:17:9.02:187,9,0	./.	1/1:2,1:3:6.02:285,6,0	1/1:4,3:7:6.02:227,6,0	./.	./.	./.	1/1:5,0:5:3.01:130,3,0	./.	1/1:5,0:5:3.01:84,3,0	1/1:3,5:9:15.05:703,15,0	./.	./.	./.	./.	./.	./.	./.	./.	1/1:7,0:7:3.01:76,3,0	./.
chr10	36707490	.	C	CTT	5641.26	PASS	AB=0.759;AC=11;AF=0.196;AN=56;BaseQRankSum=6.906;DP=785;FS=140.928;HRun=7;HaplotypeScore=108.3999;InbreedingCoeff=-0.2481;MQ=66.05;MQ0=0;MQRankSum=-5.840;QD=12.56;ReadPosRankSum=0.923;VQSLOD=-0.1831;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:28,15:43:99:578,0,597	0/0:3,0:3:9.03:0,9,105	0/0:19,0:18:38.84:0,39,484	0/0:9,0:9:17.64:0,18,184	0/1:34,13:48:99:602,0,804	0/0:32,0:32:90.26:0,90,1049	0/0:13,0:13:33.09:0,33,385	0/1:42,21:63:99:860,0,893	0/0:32,0:32:84.21:0,84,956	0/0:32,0:32:87.24:0,87,996	0/0:25,0:25:75.22:0,75,874	0/0:29,0:29:81.22:0,81,933	0/0:22,0:22:63.19:0,63,734	0/0:14,0:14:39.12:0,39,454	0/0:11,0:11:33.10:0,33,385	0/1:30,12:42:99:520,0,662	0/1:21,14:35:99:497,0,571	0/0:14,0:14:36.10:0,36,420	0/1:19,6:26:99:250,0,449	0/1:32,20:52:99:743,0,862	0/1:16,12:28:99:420,0,406	0/0:13,0:13:36.10:0,36,420	0/0:34,0:34:90.26:0,90,1049	0/0:11,0:11:33.10:0,33,385	0/0:23,0:23:63.18:0,63,734	0/1:39,9:48:99:483,0,827	0/1:34,13:47:99:480,0,750	0/1:11,5:16:99:210,0,209
chr10	36709907	.	A	AT	7909.61	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-15.812;DP=682;FS=5.717;HRun=6;HaplotypeScore=60.5923;InbreedingCoeff=0.9997;MQ=78.49;MQ0=0;MQRankSum=0.731;QD=32.15;ReadPosRankSum=0.020;VQSLOD=5.1269;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:93.21:0,93,949	1/1:1,10:11:30.10:377,30,0	0/0:21,0:22:37.02:0,37,524	0/0:19,0:19:29.92:0,30,291	0/0:38,0:38:99:0,99,1010	0/0:23,0:23:66.13:0,66,666	0/0:24,0:24:66.15:0,66,673	1/1:5,28:33:84.27:1056,84,0	0/0:15,0:15:45.10:0,45,459	0/0:26,0:26:72.15:0,72,726	0/0:18,0:18:51.12:0,51,520	0/0:17,0:17:48.09:0,48,483	1/1:4,20:24:60.19:753,60,0	1/1:2,24:26:72.22:894,72,0	0/0:26,0:26:69.16:0,69,704	0/0:21,0:21:57.13:0,57,582	0/0:38,0:38:99:0,111,1132	0/0:15,0:15:45.07:0,45,450	1/1:3,19:22:57.18:716,57,0	1/1:3,22:25:60.19:755,60,0	1/1:1,23:23:60.19:755,60,0	1/1:2,22:24:63.20:792,63,0	0/0:25,0:25:72.15:0,72,727	0/0:30,0:30:81.14:0,81,815	1/1:1,14:15:42.13:528,42,0	0/0:36,0:36:99:0,99,1002	1/1:2,40:42:99:1283,102,0	0/0:10,0:10:27.06:0,27,275
chr10	36711454	.	CAAAAAAAAAAAACA	C	10134.32	PASS	AB=0.776;AC=20;AF=0.357;AN=56;BaseQRankSum=1.317;DP=668;FS=1.751;HRun=0;HaplotypeScore=267.8090;InbreedingCoeff=0.8299;MQ=65.19;MQ0=5;MQRankSum=-9.760;QD=44.06;ReadPosRankSum=6.080;VQSLOD=3.9724;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:33:54.77:0,55,2267	1/1:2,7:9:6:229,6,0	0/0:38,0:19:29.81:0,30,711	0/0:26,0:16:28.22:0,28,681	0/0:31,0:32:85.53:0,86,3676	0/0:20,0:20:30.10:0,30,1332	0/0:17,0:17:36.11:0,36,1603	1/1:5,18:23:53.74:807,54,0	0/0:24,0:24:54.19:0,54,2550	0/0:45,0:44:99:0,109,3498	0/0:24,0:26:66.17:0,66,2721	0/0:17,0:16:45.14:0,45,2162	1/1:1,26:27:42.06:1275,42,0	1/1:3,19:22:30.07:961,30,0	0/0:22,0:22:33.06:0,33,1276	0/0:23,0:25:66.23:0,66,2765	0/0:23,0:23:46.37:0,46,2374	0/1:16,0:16:61.61:62,0,1017	1/1:2,15:17:44.87:1076,45,0	1/1:3,19:22:41.91:1089,42,0	1/1:0,13:14:11.94:226,12,0	1/1:2,25:28:60.18:1911,60,0	0/0:25,0:26:69.24:0,69,3297	0/0:18,0:18:33.07:0,33,1454	0/1:3,13:16:10.16:354,0,10	0/0:23,0:23:60.20:0,60,2646	1/1:2,34:36:57.96:2144,58,0	0/0:21,0:21:57.16:0,57,2177
chr10	36711467	.	CA	C	5079.31	PASS	AB=0.968;AC=43;AF=0.768;AN=56;BaseQRankSum=0.312;DP=657;FS=5.621;HRun=12;HaplotypeScore=144.1529;InbreedingCoeff=0.6477;MQ=60.75;MQ0=4;MQRankSum=-2.124;QD=9.49;ReadPosRankSum=5.906;VQSLOD=2.8010;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:34,2:36:36.56:187,0,37	1/1:7,0:7:4.74:16,5,0	0/0:37,0:14:13.66:0,14,127	0/0:21,0:13:10.48:0,10,175	1/1:36,2:38:84.38:600,84,0	1/1:17,1:18:22.89:176,23,0	1/1:19,0:19:29.55:200,30,0	1/1:21,0:21:30.32:211,30,0	1/1:20,0:20:16.70:272,17,0	1/1:41,1:41:46.18:486,46,0	1/1:29,1:30:48.90:401,49,0	0/0:18,0:17:18.31:0,18,95	1/1:26,0:26:27.55:125,28,0	0/1:20,0:20:7.87:30,0,8	0/1:21,1:22:35.79:87,0,36	1/1:25,1:26:52.65:372,53,0	1/1:22,3:25:54.26:398,54,0	1/1:14,1:15:18.32:131,18,0	1/1:15,0:15:33.84:181,34,0	1/1:19,0:19:22.60:106,23,0	1/1:13,0:14:8.30:50,8,0	1/1:26,0:26:37.42:168,37,0	0/0:27,0:27:33.24:0,33,198	0/0:17,0:17:13.27:0,13,96	1/1:13,0:13:10.11:49,10,0	1/1:27,2:29:32.41:456,32,0	1/1:34,0:34:40.21:146,40,0	1/1:19,1:20:24.32:233,24,0
chr10	36711468	.	A	AC	2816.12	PASS	AB=0.907;AC=23;AF=0.411;AN=56;BaseQRankSum=-6.090;DP=658;FS=0.356;HRun=1;HaplotypeScore=149.6376;InbreedingCoeff=-0.1023;MQ=60.00;MQ0=4;MQRankSum=6.946;QD=6.03;ReadPosRankSum=1.013;VQSLOD=0.3909;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:10,26:36:41.91:329,0,42	0/0:7,0:7:4.44:0,4,14	0/0:35,0:13:31.03:0,31,239	0/0:22,0:12:26.31:0,26,269	0/1:36,1:37:33.29:183,0,33	1/1:3,12:17:13.31:225,13,0	1/1:3,16:20:19.74:350,20,0	0/1:21,0:21:3.40:3,0,22	0/1:20,1:21:36.02:106,0,36	1/1:8,33:40:58.22:634,58,0	1/1:7,22:30:22.54:432,23,0	0/0:18,0:17:43.27:0,43,281	0/1:26,0:26:16.46:56,0,16	0/1:20,0:20:25.42:25,0,55	0/1:7,14:22:75.19:108,0,75	0/1:25,1:26:70.11:107,0,70	0/1:24,1:25:59.49:93,0,59	0/1:4,10:15:10.28:167,0,10	0/0:15,0:15:7.18:0,7,39	0/1:20,0:20:20.41:23,0,20	0/1:14,0:14:1.29:11,0,1	0/1:27,0:27:18.76:19,0,55	0/0:27,0:27:64.02:0,64,435	0/0:17,0:17:34.47:0,34,272	0/0:13,0:13:2.83:0,3,15	0/1:29,0:29:74.24:74,0,105	0/0:36,0:36:5.12:0,5,75	0/1:20,0:20:42.56:43,0,83
chr10	36711851	.	ATAAT	A	7690.39	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=15.787;DP=845;FS=1.909;HRun=0;HaplotypeScore=138.3682;InbreedingCoeff=0.9793;MQ=78.99;MQ0=0;MQRankSum=-0.241;QD=42.02;ReadPosRankSum=3.658;VQSLOD=5.2045;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,147,3626	0/0:13,0:13:39.13:0,39,1013	0/0:26,0:26:57.15:0,57,1179	0/0:16,0:16:26.79:0,27,529	1/1:1,38:39:93.31:1586,93,0	0/0:28,0:28:72.23:0,72,1810	0/0:23,0:23:69.24:0,69,1718	0/0:39,0:39:99:0,99,2507	1/1:5,29:34:78.27:1402,78,0	0/0:36,0:36:99:0,102,2522	0/0:21,0:21:45.15:0,45,1149	0/0:35,0:35:99:0,102,2511	0/0:35,0:35:93.32:0,93,2350	0/0:41,0:41:99:0,108,2598	0/0:32,0:32:84.29:0,84,2154	1/1:4,37:41:96.33:1717,96,0	1/1:2,20:22:54.19:967,54,0	0/0:20,0:20:54.19:0,54,1355	0/0:29,0:29:66.23:0,66,1637	0/0:38,0:38:99:0,108,2668	0/0:33,0:33:87.30:0,87,2220	0/0:33,0:33:81.28:0,81,2104	0/0:33,0:33:81.26:0,81,2035	0/0:25,0:25:66.23:0,66,1710	0/0:17,0:17:51.18:0,51,1324	1/1:5,27:32:6.30:1372,6,0	0/0:38,0:38:99:0,111,2884	1/1:2,13:15:36.12:647,36,0
chr10	36712000	.	GAACATACAA	G	11817.88	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=16.850;DP=723;FS=8.317;HRun=0;HaplotypeScore=206.3194;InbreedingCoeff=0.9651;MQ=74.58;MQ0=2;MQRankSum=-14.552;QD=50.72;ReadPosRankSum=0.177;VQSLOD=3.8038;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,99,3899	1/1:3,4:7:9.03:196,9,0	0/0:25,0:25:48:0,48,1288	0/0:30,0:30:52.69:0,53,1822	0/0:30,0:30:84.29:0,84,3802	0/0:23,0:23:57.18:0,57,2142	0/0:22,0:22:45.15:0,45,1687	1/1:8,19:27:51.13:1233,51,0	0/0:27,0:27:72.24:0,72,3226	0/0:36,0:36:99:0,102,4142	0/0:20,0:20:48.16:0,48,2127	0/0:26,0:26:78.27:0,78,3100	1/1:5,22:27:45.15:1297,45,0	1/1:5,26:31:72.25:1933,72,0	0/0:29,0:29:69.22:0,69,2865	0/0:34,0:34:87.30:0,87,3778	0/0:23,0:23:57.20:0,57,2355	0/0:23,0:23:63.17:0,63,2363	1/1:5,13:17:39.13:934,39,0	1/1:4,24:28:51.17:1337,51,0	1/1:4,5:8:3.01:55,3,0	1/1:3,27:30:63.22:1726,63,0	0/0:25,0:25:63.22:0,63,2613	0/0:34,0:34:86.07:0,86,3698	1/1:6,23:29:60.21:1597,60,0	0/0:24,0:24:60.21:0,60,2686	1/1:4,23:26:54.19:1511,54,0	0/0:19,0:19:42.14:0,42,1734
chr10	36713574	.	G	GA	5777.15	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-14.142;DP=518;FS=3.702;HRun=6;HaplotypeScore=51.5321;InbreedingCoeff=0.9699;MQ=91.32;MQ0=0;MQRankSum=-0.275;QD=31.74;ReadPosRankSum=0.215;VQSLOD=5.2626;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:50.35:0,50,519	1/1:2,7:9:21.07:264,21,0	0/0:21,0:21:48.07:0,48,474	0/0:20,0:20:51.04:0,51,489	0/0:33,0:33:90.18:0,90,911	0/0:17,0:17:42.09:0,42,429	0/0:14,0:14:39.09:0,39,398	1/1:4,24:28:72.23:906,72,0	0/0:16,0:16:45.08:0,45,451	0/0:25,0:25:69.14:0,69,699	0/0:23,0:23:57.12:0,57,581	0/0:15,0:15:42.09:0,42,429	1/1:1,15:16:33.11:415,33,0	1/1:3,9:12:2.49:345,2,0	0/0:19,0:19:51.10:0,51,514	0/0:22,0:22:57.13:0,57,582	0/0:13,0:13:36.08:0,36,367	0/0:17,0:17:45.10:0,45,459	1/1:2,12:14:39.11:476,39,0	1/1:4,23:27:68.96:842,69,0	1/1:1,9:10:24.08:302,24,0	1/1:0,21:21:63.20:793,63,0	0/0:24,0:24:63.14:0,63,643	0/0:8,0:8:21.02:0,21,206	1/1:2,12:14:30.10:377,30,0	0/0:19,0:19:48.10:0,48,490	1/1:1,30:31:84.23:1056,84,0	0/0:10,0:10:27.06:0,27,275
chr10	36714224	.	G	GT	12015.93	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=17.518;DP=741;FS=0.578;HRun=0;HaplotypeScore=94.7993;InbreedingCoeff=1.0000;MQ=82.56;MQ0=0;MQRankSum=-0.599;QD=42.31;ReadPosRankSum=-0.052;VQSLOD=4.8710;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:81.25:0,81,1115	1/1:0,12:12:33.11:527,33,0	0/0:21,0:21:59.97:0,60,756	0/0:20,0:20:54.15:0,54,707	0/0:31,0:31:87.25:0,87,1163	0/0:29,0:29:84.27:0,84,1158	0/0:15,0:15:45.15:0,45,629	1/1:3,28:31:87.28:1359,87,0	0/0:20,0:20:60.20:0,60,837	0/0:41,0:41:99:0,114,1575	0/0:22,0:22:66.21:0,66,905	0/0:30,0:30:90.29:0,90,1241	1/1:1,26:27:72.24:1150,72,0	1/1:0,27:27:72.25:1150,72,0	0/0:26,0:26:78.24:0,78,1059	0/0:29,0:29:87.29:0,87,1216	0/0:21,0:21:63.19:0,63,848	0/0:22,0:22:63.20:0,63,861	1/1:1,21:23:69.15:1041,69,0	1/1:1,35:37:99:1632,105,0	1/1:2,32:34:84.29:1333,84,0	1/1:0,34:34:90.30:1388,90,0	0/0:25,0:25:75.21:0,75,1009	0/0:24,0:24:69.13:0,69,903	1/1:0,24:24:57.19:911,57,0	0/0:37,0:37:99:0,111,1550	1/1:1,34:35:96.33:1524,96,0	0/0:15,0:15:42.14:0,42,587
chr10	36715039	.	T	TATATATGTGTATATATATA	8673.98	PASS	AB=0.911;AC=10;AF=0.185;AN=54;BaseQRankSum=10.659;DP=305;FS=1.156;HRun=0;HaplotypeScore=162.3065;InbreedingCoeff=0.1884;MQ=61.97;MQ0=0;MQRankSum=-10.055;QD=81.07;ReadPosRankSum=1.521;VQSLOD=4.3660;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:45.14:0,45,1731	0/1:7,0:7:57.50:270,0,57	0/0:3,0:3:5.75:0,6,85	0/0:6,0:5:11.20:0,11,269	0/0:16,0:16:48.15:0,48,2280	0/0:21,0:21:63.22:0,63,2675	0/0:2,0:2:6.02:0,6,245	0/1:40,0:39:99:2759,0,332	0/0:5,0:5:15.05:0,15,542	0/0:17,0:17:48.06:0,48,2239	0/0:9,0:9:27.09:0,27,1217	0/0:4,0:4:12.04:0,12,386	0/1:2,0:2:34.09:204,0,34	1/1:4,1:8:9.03:670,9,0	0/0:9,0:9:27.08:0,27,1182	0/0:13,0:13:39.11:0,39,1590	0/0:18,0:18:54.18:0,54,2553	0/0:16,0:16:45.14:0,45,2254	0/1:11,0:11:87.18:714,0,87	0/1:4,0:11:61.88:714,0,62	0/0:2,0:2:3.01:0,3,39	./.	0/0:12,0:12:36.12:0,36,1629	0/0:3,0:3:9.03:0,9,503	0/1:10,0:12:13.11:1781,0,13	0/0:18,0:18:54.17:0,54,2198	1/1:11,0:16:32.94:1563,33,0	0/0:8,0:7:21.07:0,21,764
chr10	36716051	.	CA	C	4621.84	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=16.818;DP=629;FS=0.000;HRun=4;HaplotypeScore=137.0273;InbreedingCoeff=0.9970;MQ=68.24;MQ0=1;MQRankSum=-5.197;QD=20.27;ReadPosRankSum=-0.647;VQSLOD=3.1847;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:90.43:0,90,656	1/1:0,7:7:17.96:150,18,0	0/0:16,0:14:25.95:0,26,522	0/0:14,0:14:26.41:0,26,389	0/0:38,0:38:99:0,113,804	0/0:25,0:25:69.49:0,69,501	0/0:19,0:19:51.96:0,52,421	1/1:6,20:25:56.50:467,56,0	0/0:22,0:22:56.38:0,56,414	0/0:21,0:21:58.51:0,59,643	0/0:18,0:18:46.33:0,46,304	0/0:18,0:18:50.67:0,51,408	1/1:3,23:26:72.74:593,73,0	1/1:7,18:25:56.95:501,57,0	0/0:17,0:17:47.72:0,48,387	0/0:19,0:19:47.69:0,48,368	0/0:17,0:17:41.72:0,42,341	0/0:20,0:20:45.23:0,45,352	1/1:3,12:15:28.75:289,29,0	1/1:2,22:24:37.76:403,38,0	1/1:2,7:9:17.84:167,18,0	1/1:2,29:31:67.53:624,68,0	0/0:18,0:18:52.43:0,52,359	0/0:26,0:25:73.52:0,74,545	1/1:3,34:37:83.03:782,83,0	0/0:35,0:35:99:0,105,926	1/1:1,27:28:71:646,71,0	0/0:25,0:25:74.11:0,74,575
chr10	36716053	.	GA	G	14551.62	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-2.002;DP=633;FS=6.442;HRun=8;HaplotypeScore=103.4425;InbreedingCoeff=0.7712;MQ=67.45;MQ0=1;MQRankSum=-5.606;QD=24.13;ReadPosRankSum=4.024;VQSLOD=4.8862;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,31:33:89.98:854,90,0	1/1:8,0:8:18.03:173,18,0	0/0:15,1:14:0.17:0,0,289	0/0:14,0:14:5.95:0,6,249	1/1:1,37:38:99:1072,111,0	1/1:1,24:25:72.12:695,72,0	1/1:2,18:20:48.08:464,48,0	1/1:25,0:24:57.06:543,57,0	1/1:1,21:22:54.08:522,54,0	1/1:4,16:20:48.07:464,48,0	1/1:0,18:18:48.07:463,48,0	1/1:2,16:18:45.07:435,45,0	1/1:27,0:27:71.61:678,72,0	1/1:25,0:25:60.08:569,60,0	1/1:1,15:16:42.07:406,42,0	1/1:1,17:18:42.07:406,42,0	1/1:2,15:17:36.06:348,36,0	1/1:2,18:20:39.57:402,40,0	1/1:15,1:16:39.05:369,39,0	1/1:26,0:26:54.93:506,55,0	1/1:9,0:9:21.02:198,21,0	1/1:32,1:33:77.25:738,77,0	1/1:1,17:18:51.08:492,51,0	1/1:2,23:24:66.11:637,66,0	1/1:38,0:38:91.68:859,92,0	1/1:1,33:34:99:948,99,0	1/1:28,0:27:75.04:706,75,0	1/1:4,22:26:63.09:608,63,0
chr10	36721559	.	CG	C	2170.10	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=11.346;DP=453;FS=18.780;HRun=2;HaplotypeScore=92.2718;InbreedingCoeff=0.9454;MQ=65.71;MQ0=7;MQRankSum=-11.011;QD=14.76;ReadPosRankSum=1.255;VQSLOD=2.1520;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,102,1365	1/1:3,6:9:20.94:169,21,0	0/0:25,0:8:10.72:0,11,90	0/1:25,0:9:0.61:1,0,114	0/0:20,0:20:57.08:0,57,720	0/0:19,0:19:45.01:0,45,611	0/0:10,0:10:27.02:0,27,376	1/1:6,10:12:26.63:239,27,0	0/0:10,0:10:30.06:0,30,386	0/0:20,0:20:57.14:0,57,717	0/0:15,0:15:39.10:0,39,543	0/0:11,0:11:33:0,33,368	1/1:2,8:10:23.62:210,24,0	1/1:6,8:14:32.58:269,33,0	0/0:13,0:13:30.06:0,30,389	0/0:12,0:12:30.06:0,30,389	0/0:29,0:29:77.76:0,78,1012	0/0:24,0:24:63.18:0,63,898	1/1:4,8:12:31.80:267,32,0	1/1:2,11:13:35.37:274,35,0	1/1:4,2:6:13.93:117,14,0	1/1:0,13:14:32.78:244,33,0	0/0:14,0:14:42.10:0,42,562	0/0:21,0:21:57.16:0,57,793	1/1:1,6:6:14.78:112,15,0	0/0:19,0:19:57.11:0,57,685	1/1:2,18:20:56.97:486,57,0	0/0:8,0:8:24.05:0,24,319
chr10	36721562	.	AAAAAAAG	A	5020.10	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=11.453;DP=453;FS=7.729;HRun=0;HaplotypeScore=131.2793;InbreedingCoeff=0.9732;MQ=65.93;MQ0=5;MQRankSum=-10.889;QD=43.28;ReadPosRankSum=1.035;VQSLOD=4.4808;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:87.76:0,88,2497	1/1:1,6:7:18.06:357,18,0	0/0:26,0:8:24.08:0,24,452	0/0:25,0:9:15.46:0,15,280	0/0:20,0:20:48.16:0,48,1362	0/0:21,0:21:48.16:0,48,1365	0/0:11,0:11:27.09:0,27,742	1/1:4,10:10:21.07:426,21,0	0/0:10,0:10:18.04:0,18,477	0/0:18,0:18:39.12:0,39,1081	0/0:15,0:15:36.12:0,36,1039	0/0:13,0:13:24.07:0,24,837	1/1:3,7:10:24.08:482,24,0	1/1:4,8:12:27.06:492,27,0	0/0:14,0:14:27.09:0,27,773	0/0:13,0:13:21.04:0,21,564	0/0:28,0:28:66.11:0,66,1858	0/0:27,0:27:66.22:0,66,1981	1/1:4,10:14:33.07:607,33,0	1/1:0,14:14:39.05:679,39,0	1/1:3,2:5:6.02:117,6,0	1/1:5,8:13:24.08:463,24,0	0/0:13,0:13:33.11:0,33,1197	0/0:21,0:21:48.63:0,49,1741	1/1:1,6:6:15.05:312,15,0	0/0:19,0:19:36.11:0,36,1042	1/1:2,18:20:54.19:1084,54,0	0/0:8,0:8:18.06:0,18,543
chr10	36721568	.	AG	A	1530.24	PASS	AB=0.879;AC=21;AF=0.375;AN=56;BaseQRankSum=10.924;DP=419;FS=7.144;HRun=1;HaplotypeScore=90.8373;InbreedingCoeff=0.8875;MQ=71.03;MQ0=1;MQRankSum=-8.237;QD=11.86;ReadPosRankSum=-1.512;VQSLOD=1.2097;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:80.64:0,81,418	1/1:6,0:6:17.65:109,18,0	0/1:23,4:11:6.96:7,0,111	0/0:24,1:11:11.17:0,11,110	0/0:19,0:19:6.52:0,7,163	0/0:21,0:21:38.52:0,39,171	0/0:13,0:13:25.19:0,25,132	1/1:11,0:8:23.69:159,24,0	0/0:9,0:9:16.65:0,17,85	0/0:16,0:16:14.04:0,14,138	0/0:13,0:13:33.12:0,33,156	0/0:9,0:9:24.01:0,24,269	1/1:10,0:10:29.62:210,30,0	1/1:9,0:9:26.51:165,27,0	0/0:13,0:13:23.09:0,23,111	0/0:14,0:14:19.50:0,20,95	0/0:24,1:25:35.09:0,35,219	0/0:29,0:29:60.58:0,61,288	1/1:11,0:11:32.30:210,32,0	1/1:14,0:14:38.37:250,38,0	1/1:2,0:2:5.88:36,6,0	1/1:9,0:9:23.55:144,24,0	0/0:13,0:13:39.09:0,39,452	0/0:18,0:18:48.61:0,49,576	1/1:7,0:6:14.77:100,15,0	0/0:14,0:14:17.49:0,17,136	1/1:18,3:20:56.01:355,56,0	0/0:6,0:6:16.47:0,16,72
chr10	36721569	.	G	GA	6605.18	PASS	AB=1.000;AC=48;AF=0.857;AN=56;BaseQRankSum=-1.554;DP=446;FS=7.417;HRun=8;HaplotypeScore=85.5870;InbreedingCoeff=0.6228;MQ=69.57;MQ0=1;MQRankSum=-1.859;QD=16.27;ReadPosRankSum=1.182;VQSLOD=4.6492;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,28:34:72.11:812,72,0	1/1:8,0:8:10.92:34,11,0	0/1:29,0:11:32.45:32,0,65	0/1:25,0:11:11.27:11,0,73	1/1:3,18:21:48.14:544,48,0	1/1:1,20:21:45.13:512,45,0	1/1:2,11:13:21.06:242,21,0	1/1:14,0:11:23.49:116,23,0	1/1:1,8:9:15.04:173,15,0	1/1:0,15:15:45.13:519,45,0	1/1:2,13:15:33.10:381,33,0	0/0:9,0:9:21:0,21,192	1/1:13,0:13:22.14:138,22,0	1/1:9,0:9:8.37:20,8,0	1/1:2,12:14:24.07:275,24,0	1/1:1,14:15:18.01:207,18,0	1/1:4,21:25:60.09:675,60,0	1/1:1,28:29:63.19:727,63,0	1/1:13,0:13:20.42:132,20,0	1/1:15,0:15:18.90:103,19,0	1/1:5,0:5:4.95:12,5,0	1/1:10,0:10:3.98:11,4,0	0/0:13,0:13:35.99:0,36,323	0/0:18,0:18:45.02:0,45,412	1/1:8,0:7:6.95:29,7,0	1/1:0,14:14:42.10:473,42,0	1/1:26,0:25:44.79:220,45,0	1/1:0,6:6:18.05:208,18,0
chr10	36721740	.	C	CA	5698.76	PASS	AB=0.875;AC=21;AF=0.375;AN=56;BaseQRankSum=-10.231;DP=407;FS=10.697;HRun=8;HaplotypeScore=41.4664;InbreedingCoeff=0.9098;MQ=74.10;MQ0=0;MQRankSum=0.295;QD=28.21;ReadPosRankSum=-0.961;VQSLOD=4.2381;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:45.02:0,45,412	1/1:0,6:6:18.05:208,18,0	0/1:6,0:7:11.28:11,0,73	0/0:9,0:9:10.18:0,10,95	0/0:21,0:21:51:0,51,462	0/0:8,0:8:15.01:0,15,137	0/0:12,0:12:30.01:0,30,274	1/1:5,29:34:62.78:963,63,0	0/0:10,0:10:27.01:0,27,247	0/0:7,0:7:18:0,18,165	0/0:6,0:6:16.83:0,17,142	0/0:14,0:14:36.02:0,36,329	1/1:4,10:14:30.09:346,30,0	1/1:1,15:16:36.11:415,36,0	0/0:5,0:5:12:0,12,110	0/0:13,0:13:33:0,33,302	0/0:7,0:7:18.01:0,18,165	0/0:9,0:9:27.01:0,27,247	1/1:9,17:26:51.13:570,51,0	1/1:2,13:15:39.12:450,39,0	1/1:2,16:18:45.13:519,45,0	1/1:1,16:17:48.14:554,48,0	0/0:15,0:15:45.02:0,45,412	0/0:10,0:10:24.01:0,24,220	1/1:1,12:13:36.11:416,36,0	0/0:28,1:29:40.40:0,40,618	1/1:1,35:35:99:1246,108,0	0/0:11,0:11:33.02:0,33,302
chr10	36721844	.	A	AT	5498.71	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-10.470;DP=449;FS=33.474;HRun=7;HaplotypeScore=42.7744;InbreedingCoeff=0.9924;MQ=79.17;MQ0=0;MQRankSum=-1.637;QD=30.72;ReadPosRankSum=-0.791;VQSLOD=2.4676;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:42.07:0,42,406	1/1:2,8:10:24.07:289,24,0	0/0:11,0:11:23.97:0,24,216	0/0:11,0:11:11.78:0,12,128	0/0:29,0:29:75.11:0,75,723	0/0:10,0:10:30.05:0,30,290	0/0:19,0:19:39.04:0,39,371	1/1:5,30:35:90.26:1074,90,0	0/0:16,0:16:45.07:0,45,435	0/0:11,0:11:24.03:0,24,232	0/0:8,0:8:24.04:0,24,232	0/0:17,0:17:51.07:0,51,487	1/1:2,17:19:48.15:580,48,0	1/1:3,10:13:27.08:326,27,0	0/0:10,0:10:27.04:0,27,261	0/0:22,0:22:60.08:0,60,574	0/0:9,0:9:23.78:0,24,214	0/0:19,0:19:57.09:0,57,550	1/1:1,24:25:72.22:870,72,0	1/1:0,15:15:45.06:512,45,0	1/1:1,9:10:27.08:326,27,0	1/1:2,13:15:33.10:398,33,0	0/0:24,0:24:54.06:0,54,515	0/0:13,0:13:33.05:0,33,319	1/1:1,13:14:36.11:435,36,0	0/0:20,0:20:45.04:0,45,428	1/1:4,19:23:57.17:689,57,0	0/0:7,0:7:21.03:0,21,203
chr10	36724413	.	T	TA	4008.91	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=1.178;DP=591;FS=7.821;HRun=7;HaplotypeScore=74.8782;InbreedingCoeff=0.9952;MQ=71.09;MQ0=0;MQRankSum=-0.549;QD=28.64;ReadPosRankSum=1.770;VQSLOD=4.2550;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:77.60:0,78,730	0/0:14,0:14:36.05:0,36,347	0/0:14,0:14:20.05:0,20,311	0/0:12,0:13:18.12:0,18,198	1/1:6,24:30:69.21:830,69,0	0/0:26,0:26:66.09:0,66,631	0/0:18,0:18:48.04:0,48,451	0/0:31,0:31:74.91:0,75,708	1/1:2,16:18:42.08:490,42,0	0/0:34,0:34:96.15:0,96,927	0/0:31,0:31:75.11:0,75,724	0/0:22,0:22:62.88:0,63,587	0/0:24,0:24:72.12:0,72,695	0/0:22,0:22:60.10:0,60,579	0/0:18,0:18:48.06:0,48,458	1/1:2,17:18:48.15:577,48,0	1/1:4,22:26:53.69:652,54,0	0/0:25,0:25:69.11:0,69,665	0/0:21,0:21:39.04:0,39,377	0/0:24,0:24:69.11:0,69,666	0/0:7,0:7:18.03:0,18,174	0/0:10,0:10:27.04:0,27,260	0/0:16,0:16:39.04:0,39,370	0/0:11,0:11:33.05:0,33,319	0/0:15,0:15:36.05:0,36,347	1/1:4,27:31:29.31:919,29,0	0/0:24,0:24:66.10:0,66,637	1/1:1,15:15:45.14:541,45,0
chr10	36725881	.	C	CTTCCAG	22625.91	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-9.530;DP=581;FS=1.035;HRun=0;HaplotypeScore=108.6594;InbreedingCoeff=0.9841;MQ=79.45;MQ0=0;MQRankSum=-18.379;QD=82.88;ReadPosRankSum=2.090;VQSLOD=6.1617;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,25:36:90.24:3009,90,0	0/0:11,0:11:30.09:0,30,690	0/0:32,0:32:84.21:0,84,1791	0/0:17,0:17:45.14:0,45,1003	1/1:3,13:17:36.08:1222,36,0	1/1:1,12:16:27.09:985,27,0	1/1:5,12:19:39.13:1393,39,0	0/0:29,0:29:84.27:0,84,1917	1/1:3,13:20:39.13:1413,39,0	1/1:6,18:26:72.25:2608,72,0	1/1:4,7:13:24.08:834,24,0	0/0:26,0:26:72.25:0,72,1692	0/0:19,0:19:57.20:0,57,1402	0/0:25,0:25:75.26:0,75,1823	1/1:5,23:31:81.07:2574,81,0	1/1:1,17:20:54.19:1968,54,0	1/1:5,12:18:39.13:1420,39,0	1/1:4,15:21:51.11:1718,51,0	0/0:25,0:25:69.22:0,69,1594	0/0:11,0:11:33.11:0,33,787	0/0:32,0:32:87.27:0,87,2013	0/0:14,0:14:36.12:0,36,886	0/0:10,0:10:30.10:0,30,691	0/0:18,0:18:54.17:0,54,1281	0/0:20,0:20:57.16:0,57,1305	1/1:4,28:34:99:3422,99,0	0/0:19,0:18:57.18:0,57,1339	1/1:2,0:2:5.69:59,6,0
chr10	36726791	.	TATGAGTAA	T	19369.89	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=19.282;DP=714;FS=6.026;HRun=0;HaplotypeScore=203.9864;InbreedingCoeff=0.9998;MQ=88.90;MQ0=0;MQRankSum=-19.943;QD=66.11;ReadPosRankSum=3.444;VQSLOD=4.5019;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,31:33:60.21:1648,60,0	0/0:13,0:13:36.12:0,36,1498	0/0:37,0:37:99:0,108,3826	0/0:26,0:26:78.21:0,78,2588	1/1:1,27:28:48.16:1357,48,0	1/1:0,15:15:36.12:1018,36,0	1/1:0,20:20:45.15:1273,45,0	0/0:30,0:30:75.24:0,75,2991	1/1:1,27:28:78.27:2180,78,0	1/1:0,33:33:96.23:2448,96,0	1/1:0,10:10:30.10:848,30,0	0/0:30,0:30:87.30:0,87,3752	0/0:33,0:33:99:0,99,4074	0/0:40,0:40:99:0,111,4677	1/1:2,20:22:57.20:1612,57,0	1/1:2,29:31:72.25:1991,72,0	1/1:0,14:14:30.10:848,30,0	1/1:2,16:18:33.11:934,33,0	0/0:22,0:22:66.21:0,66,2479	0/0:24,0:24:66.21:0,66,2804	0/0:46,0:46:99:0,129,5620	0/0:21,0:21:60.19:0,60,2393	0/0:12,0:12:36.12:0,36,1595	0/0:40,0:40:99:0,114,4588	0/0:18,0:18:54.19:0,54,2328	1/1:1,26:27:75.24:2027,75,0	0/0:29,0:29:84.29:0,84,3678	1/1:0,14:14:42.14:1188,42,0
chr10	36727274	.	C	CGA	6777.79	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=16.871;DP=656;FS=5.128;HRun=0;HaplotypeScore=109.6151;InbreedingCoeff=0.9929;MQ=75.21;MQ0=0;MQRankSum=-2.829;QD=40.59;ReadPosRankSum=3.172;VQSLOD=6.8409;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,27:30:84.27:1197,84,0	0/0:6,0:6:18.06:0,18,293	0/0:25,0:25:72.22:0,72,1145	0/0:23,0:23:65.78:0,66,965	0/0:23,0:23:66.23:0,66,1073	1/1:3,27:30:80.48:1166,80,0	1/1:2,21:23:63.20:949,63,0	0/0:37,0:37:99:0,108,1740	0/0:29,0:29:84.29:0,84,1367	1/1:1,16:17:48.16:736,48,0	1/1:0,14:14:33.11:490,33,0	0/0:28,0:28:84.27:0,84,1344	0/0:20,0:20:60.19:0,60,950	0/0:23,0:23:69.21:0,69,1092	1/1:3,27:30:82.91:1162,83,0	0/0:15,0:15:45.13:0,45,686	0/0:27,0:27:81.28:0,81,1318	1/1:1,22:23:69.23:1079,69,0	0/0:28,0:28:81.25:0,81,1272	0/0:28,0:28:84.29:0,84,1367	0/0:38,0:38:99:0,114,1859	0/0:18,0:18:54.17:0,54,857	0/0:19,0:19:54.14:0,54,805	0/0:20,0:20:60.20:0,60,979	0/0:20,0:20:60.19:0,60,950	0/0:27,0:27:81.28:0,81,1321	0/0:31,0:31:93.30:0,93,1486	0/0:4,0:4:12.04:0,12,196
chr10	36727275	.	TC	T	4009.52	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=17.669;DP=661;FS=3.381;HRun=1;HaplotypeScore=106.1907;InbreedingCoeff=0.9929;MQ=75.25;MQ0=0;MQRankSum=-2.290;QD=24.01;ReadPosRankSum=2.916;VQSLOD=3.8843;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,28:30:83.20:671,83,0	0/0:6,0:6:18.06:0,18,288	0/0:25,0:25:72.24:0,72,1118	0/0:25,0:25:64.43:0,64,1023	0/0:23,0:23:66.21:0,66,1018	1/1:3,27:30:80.48:672,80,0	1/1:1,21:22:56.81:519,57,0	0/0:36,0:36:99:0,108,1697	0/0:29,0:29:87.28:0,87,1357	1/1:1,16:17:50.79:464,51,0	1/1:0,14:14:32.81:282,33,0	0/0:28,0:28:81.27:0,81,1271	0/0:20,0:20:60.19:0,60,929	0/0:23,0:23:69.24:0,69,1101	1/1:3,27:30:83.47:736,83,0	0/0:14,0:14:42.14:0,42,671	0/0:27,0:27:81.26:0,81,1270	1/1:2,22:24:71.91:665,72,0	0/0:28,0:28:81.27:0,81,1257	0/0:28,0:28:84.27:0,84,1311	0/0:39,0:39:99:0,117,1845	0/0:18,0:18:54.18:0,54,863	0/0:18,0:18:54.17:0,54,836	0/0:22,0:22:66.14:0,66,998	0/0:20,0:20:57.17:0,57,884	0/0:29,0:29:81.23:0,81,1289	0/0:32,0:32:96.30:0,96,1483	0/0:4,0:4:12.04:0,12,192
chr10	36728970	.	C	CACAGACAGACAG	25019.68	PASS	AB=0.582;AC=48;AF=0.857;AN=56;BaseQRankSum=-8.804;DP=1011;FS=15.297;HRun=0;HaplotypeScore=266.4661;InbreedingCoeff=0.5976;MQ=67.26;MQ0=3;MQRankSum=-5.900;QD=27.55;ReadPosRankSum=-3.172;VQSLOD=2.4597;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:8,0:50:32.32:595,32,0	1/1:3,6:13:12.51:702,13,0	0/0:38,0:34:17.83:0,18,194	0/0:37,0:26:3.04:0,3,175	1/1:13,0:46:54.18:1044,54,0	1/1:4,0:35:30.10:1633,30,0	1/1:36,0:36:54.16:1390,54,0	1/1:48,0:48:63.25:1315,63,0	1/1:11,0:38:32.97:826,33,0	1/1:2,0:48:94.01:2167,94,0	1/1:27,0:27:21.01:376,21,0	0/1:9,0:28:30.41:41,0,30	1/1:17,29:56:45.15:2556,45,0	1/1:11,17:35:24.08:1388,24,0	1/1:0,0:48:30.10:1641,30,0	1/1:17,0:43:45.15:1092,45,0	1/1:17,0:36:24.08:570,24,0	1/1:0,0:27:6.02:329,6,0	1/1:19,7:28:36.71:730,37,0	1/1:9,17:30:30.10:1493,30,0	1/1:46,0:46:42.35:615,42,0	1/1:10,22:40:33.11:1641,33,0	0/0:13,0:27:14.40:0,14,38	0/1:11,0:46:15.74:16,0,32	1/1:12,10:32:15.05:847,15,0	1/1:10,0:27:50.92:1088,51,0	1/1:10,16:33:12.04:700,12,0	1/1:6,0:12:12.04:226,12,0
chr10	36729682	.	T	TAA	10876.19	PASS	AB=0.593;AC=45;AF=0.804;AN=56;BaseQRankSum=-0.476;DP=686;FS=2.034;HRun=9;HaplotypeScore=107.9992;InbreedingCoeff=0.8102;MQ=75.68;MQ0=1;MQRankSum=-1.938;QD=19.05;ReadPosRankSum=-1.774;VQSLOD=3.3710;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,39:46:60.19:901,60,0	1/1:1,0:11:24.27:83,24,0	0/0:16,0:16:24.83:0,25,232	0/0:14,0:15:4.66:0,5,116	1/1:6,23:30:81.13:1104,81,0	1/1:3,13:16:30.10:462,30,0	1/1:5,27:34:68.70:967,69,0	1/1:6,0:25:19.98:177,20,0	1/1:1,19:20:39.13:598,39,0	1/1:9,13:24:47.05:577,47,0	1/1:6,10:17:36.11:500,36,0	0/0:28,0:28:57.03:0,57,606	0/1:11,0:35:41.47:128,0,41	1/1:2,0:32:39.93:137,40,0	1/1:2,19:21:44.64:655,45,0	1/1:6,18:25:45.11:656,45,0	1/1:6,30:37:75.25:1146,75,0	1/1:0,22:26:58.66:811,59,0	1/1:2,1:14:3.14:145,3,0	1/1:7,0:20:37.42:211,37,0	1/1:5,0:28:37.43:129,37,0	1/1:9,1:23:11.61:171,12,0	0/0:11,0:12:24.03:0,24,255	0/0:43,0:43:99:0,108,1141	1/1:7,1:24:35.96:192,36,0	1/1:4,19:24:56.44:726,56,0	1/1:14,0:29:20.84:198,21,0	1/1:0,6:8:16.91:202,17,0
chr10	36730687	.	CG	C	4043.65	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=4.752;DP=555;FS=1.253;HRun=1;HaplotypeScore=117.7069;InbreedingCoeff=0.8958;MQ=59.88;MQ0=8;MQRankSum=-4.574;QD=19.26;ReadPosRankSum=-1.203;VQSLOD=3.4848;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:31:70.92:0,71,1151	1/1:4,0:4:11.99:109,12,0	0/0:30,0:13:25.37:0,25,327	0/1:38,0:8:10.88:11,0,54	0/0:25,0:25:57.56:0,58,808	0/0:17,0:17:44.94:0,45,547	0/0:19,0:19:53.88:0,54,715	1/1:2,22:22:53.79:571,54,0	0/0:18,0:18:26.01:0,26,595	0/0:12,0:12:32.86:0,33,390	0/0:22,0:22:50.03:0,50,728	0/0:16,0:16:48.15:0,48,742	1/1:8,8:16:28.27:311,28,0	1/1:6,9:15:33.01:362,33,0	0/0:23,0:23:54.02:0,54,733	0/0:24,0:24:71.61:0,72,878	0/0:16,0:16:43.97:0,44,601	0/0:23,0:22:42.49:0,42,601	1/1:8,4:11:15.43:170,15,0	1/1:15,21:36:59.35:785,59,0	1/1:1,6:7:3.01:39,3,0	1/1:2,14:16:28.97:408,29,0	0/0:18,0:18:54.18:0,54,857	0/0:16,0:16:44.31:0,44,716	1/1:6,14:20:54.13:638,54,0	0/0:17,0:17:47.05:0,47,596	1/1:1,21:22:51.16:638,51,0	0/0:17,0:17:50.51:0,51,609
chr10	36730690	.	AG	A	5848.12	PASS	AB=0.966;AC=32;AF=0.571;AN=56;BaseQRankSum=-0.858;DP=590;FS=26.444;HRun=1;HaplotypeScore=112.8706;InbreedingCoeff=0.0521;MQ=62.12;MQ0=10;MQRankSum=-4.900;QD=13.32;ReadPosRankSum=-8.209;VQSLOD=0.4518;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:35,1:35:72.75:73,0,100	1/1:4,0:4:11.99:113,12,0	0/0:32,2:13:10.63:0,11,319	0/0:39,0:11:0.08:0,0,126	0/0:25,0:25:5.77:0,6,68	0/1:16,0:16:34.41:52,0,34	0/1:18,0:18:38.92:56,0,39	1/1:26,2:27:62.51:644,63,0	0/1:16,2:18:44.59:108,0,45	0/1:13,0:13:15.08:90,0,15	0/1:24,1:25:34.54:99,0,35	0/0:17,0:17:51.12:0,51,643	1/1:16,0:16:37.24:389,37,0	1/1:16,1:17:39.97:431,40,0	0/1:26,0:26:17.83:119,0,18	0/1:22,1:23:34.09:149,0,34	0/1:15,1:16:52.90:53,0,57	0/1:23,1:23:44.57:57,0,45	1/1:15,0:15:27.41:275,27,0	1/1:34,1:34:62.79:790,63,0	1/1:5,0:5:5.98:59,6,0	1/1:16,0:16:35.63:454,36,0	0/0:20,0:20:57.11:0,57,717	0/0:16,0:16:27.50:0,27,602	1/1:24,0:24:68.24:763,68,0	0/1:22,1:23:9.57:246,0,10	1/1:23,1:24:57.05:695,57,0	0/1:16,1:17:33.22:132,0,33
chr10	36730707	.	G	GA	1889.85	PASS	AB=0.873;AC=15;AF=0.268;AN=56;BaseQRankSum=-1.988;DP=642;FS=5.420;HRun=13;HaplotypeScore=118.1016;InbreedingCoeff=0.6828;MQ=67.73;MQ0=11;MQRankSum=1.741;QD=7.78;ReadPosRankSum=1.733;VQSLOD=2.6408;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,22:34:14.81:417,15,0	0/0:3,0:3:5.94:0,6,41	0/0:50,1:20:19.45:0,19,115	0/1:43,0:20:1.41:1,0,44	0/0:22,0:24:52.48:0,52,341	1/1:4,10:14:12.01:111,12,0	1/1:7,13:20:24.03:223,24,0	0/0:29,0:28:56.18:0,56,385	0/0:17,0:17:27.53:0,28,173	1/1:4,16:20:42.02:382,42,0	0/1:15,7:24:46.29:225,0,46	0/0:16,0:17:40.69:0,41,273	0/0:16,1:17:5.43:0,5,237	0/0:20,0:20:30.34:0,30,323	1/1:9,17:26:7.14:299,7,0	0/0:18,1:20:14.61:0,15,227	0/0:20,0:20:19.05:0,19,268	1/1:10,22:31:11.19:380,11,0	0/0:21,1:22:17.65:0,18,251	0/0:27,1:28:25.70:0,26,318	0/0:9,0:9:14.88:0,15,103	0/0:17,0:17:37.26:0,37,250	0/0:15,0:15:20.78:0,21,144	0/0:16,0:16:32.67:0,33,226	0/0:30,0:31:73.35:0,73,499	0/1:20,5:27:34.99:35,0,209	0/0:26,0:26:47.98:0,48,346	0/0:16,0:16:35.30:0,35,242
chr10	36731265	.	GTGAAGAATTTGCTTCT	G	18128.34	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=16.315;DP=590;FS=12.482;HRun=0;HaplotypeScore=274.7386;InbreedingCoeff=0.9980;MQ=79.60;MQ0=0;MQRankSum=-16.300;QD=101.84;ReadPosRankSum=4.363;VQSLOD=3.4220;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:75.26:0,75,5901	1/1:1,7:8:21.07:940,21,0	0/0:25,0:25:75.18:0,75,3718	0/0:24,0:24:72.24:0,72,4466	0/0:28,0:28:84.29:0,84,5575	0/0:26,0:26:78.27:0,78,5830	0/0:30,0:30:90.31:0,90,6659	1/1:9,14:23:42.13:1802,42,0	0/0:20,0:20:60.21:0,60,4343	0/0:19,0:19:57.20:0,57,4471	0/0:16,0:16:48.15:0,48,3279	0/0:29,0:29:87.30:0,87,6386	1/1:2,16:18:48.16:2185,48,0	1/1:3,21:24:51.18:2419,51,0	0/0:25,0:25:72.25:0,72,5175	0/0:24,0:24:69.24:0,69,4893	0/0:26,0:26:75.26:0,75,5208	0/0:17,0:17:51.18:0,51,3746	1/1:5,6:11:18.06:810,18,0	1/1:1,13:14:39.09:1744,39,0	1/1:4,15:19:33.11:1379,33,0	1/1:2,11:13:30.10:1436,30,0	0/0:22,0:22:66.23:0,66,4993	0/0:26,0:26:78.25:0,78,5604	1/1:0,14:14:39.13:1868,39,0	0/0:20,0:20:60.21:0,60,4417	1/1:5,29:34:74.92:3545,75,0	0/0:10,0:10:30.10:0,30,2259
chr10	36731971	.	G	GT	4246.72	PASS	AB=0.736;AC=20;AF=0.357;AN=56;BaseQRankSum=-16.061;DP=683;FS=1.140;HRun=11;HaplotypeScore=120.5922;InbreedingCoeff=0.8412;MQ=65.94;MQ0=3;MQRankSum=-1.694;QD=17.40;ReadPosRankSum=-2.981;VQSLOD=3.4761;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:50:77.35:0,77,227	0/1:2,7:9:5.20:134,0,5	0/0:21,0:15:29.86:0,30,230	0/0:21,1:17:1.06:0,1,143	0/0:6,0:36:58.41:0,58,182	0/0:2,0:20:36.66:0,37,108	0/0:1,0:14:22.40:0,22,66	1/1:15,31:46:87.13:863,87,0	0/0:4,0:26:38.69:0,39,112	0/0:4,0:27:46.84:0,47,137	0/0:5,0:18:22.39:0,22,66	0/1:9,1:10:3.56:4,0,159	1/1:5,10:15:24.04:244,24,0	1/1:7,14:21:12.83:312,13,0	0/0:2,0:27:48.88:0,49,143	0/0:2,0:24:40.73:0,41,118	0/0:5,0:30:44.80:0,45,129	0/0:2,0:22:38.70:0,39,114	1/1:17,10:27:15.78:323,16,0	1/1:6,19:25:33.82:505,34,0	1/1:4,13:17:12.83:307,13,0	1/1:4,13:19:21.99:372,22,0	0/0:21,0:21:44.77:0,45,348	0/0:20,0:21:49.84:0,50,378	1/1:2,19:21:44.95:457,45,0	0/0:6,0:39:65.25:0,65,187	1/1:5,28:34:37.52:727,38,0	0/0:4,0:18:27.42:0,27,94
chr10	36733807	.	A	AGTGTGTGTGTGT	9963.33	PASS	AB=0.960;AC=43;AF=0.796;AN=54;BaseQRankSum=-1.217;DP=715;FS=15.323;HRun=0;HaplotypeScore=221.4299;InbreedingCoeff=0.6335;MQ=52.04;MQ0=3;MQRankSum=-3.885;QD=17.67;ReadPosRankSum=-3.693;VQSLOD=2.1521;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:33,0:31:13.83:184,14,0	1/1:3,0:8:6.02:313,6,0	0/0:29,0:19:5.87:0,6,41	0/1:23,0:14:26.82:31,0,27	0/0:16,8:29:0.47:0,0,1	1/1:24,0:24:8.62:192,9,0	1/1:27,0:27:19.95:264,20,0	1/1:30,0:27:37.57:585,38,0	1/1:13,12:31:8.50:527,9,0	1/1:18,0:36:22.45:435,22,0	1/1:18,0:18:5.59:71,6,0	0/0:24,0:25:55.16:0,55,1843	1/1:18,0:34:9.03:429,9,0	1/1:14,0:28:3.01:157,3,0	1/1:12,2:28:5.81:313,6,0	1/1:16,19:41:32.90:1815,33,0	1/1:17,4:24:9.03:388,9,0	1/1:10,0:10:6:68,6,0	1/1:23,0:23:29.74:489,30,0	1/1:17,0:17:12.03:171,12,0	1/1:33,0:33:15.05:267,15,0	1/1:21,0:21:18.05:338,18,0	0/0:16,0:16:24.07:0,24,587	0/0:29,0:29:51.64:0,52,1556	./.	1/1:10,11:28:48.13:1214,48,0	1/1:26,2:28:36:896,36,0	1/1:7,5:14:15.05:818,15,0
chr10	36735035	.	T	TG	11001.05	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-10.257;DP=637;FS=0.000;HRun=2;HaplotypeScore=64.9337;InbreedingCoeff=0.9844;MQ=72.43;MQ0=0;MQRankSum=-0.880;QD=36.92;ReadPosRankSum=2.423;VQSLOD=5.4603;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,28:31:75.08:1026,75,0	0/0:4,0:4:12.04:0,12,149	0/0:15,0:15:19.82:0,20,319	0/0:9,0:9:14.14:0,14,159	1/1:0,29:29:84.04:1153,84,0	1/1:0,25:25:72.09:963,72,0	1/1:1,21:22:54.13:753,54,0	0/0:37,0:37:99:0,99,1207	1/1:1,21:22:60.17:841,60,0	1/1:0,20:20:57.15:765,57,0	1/1:0,19:19:57.05:768,57,0	0/0:21,0:21:54.15:0,54,646	0/0:26,0:26:78.12:0,78,902	0/0:26,0:26:75.22:0,75,907	1/1:1,28:29:75.21:1055,75,0	1/1:0,15:15:39.13:561,39,0	1/1:0,15:15:42.14:603,42,0	1/1:0,32:32:81.27:1165,81,0	0/0:27,0:27:78.21:0,78,931	0/0:22,0:22:60.17:0,60,720	0/0:28,0:28:66.08:0,66,765	0/0:18,0:18:47.93:0,48,539	0/0:25,0:25:69.22:0,69,855	0/0:17,0:17:45.11:0,45,531	0/0:33,0:33:99:0,99,1207	1/1:2,30:32:90.06:1220,90,0	0/0:31,0:31:87.27:0,87,1074	1/1:1,6:7:9.03:129,9,0
chr10	36735965	.	TAA	T	12448.39	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=9.220;DP=582;FS=9.809;HRun=3;HaplotypeScore=84.3990;InbreedingCoeff=0.9976;MQ=96.14;MQ0=4;MQRankSum=-7.378;QD=38.54;ReadPosRankSum=3.367;VQSLOD=3.7497;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,25:24:60.18:896,60,0	1/1:0,5:5:15.05:230,15,0	0/0:32,0:32:96.29:0,96,1792	0/0:29,0:27:81.28:0,81,1503	0/0:20,0:20:57.20:0,57,1099	1/1:2,27:28:69.23:1050,69,0	1/1:0,16:16:42.14:643,42,0	1/1:1,16:17:45.13:647,45,0	0/0:14,0:14:39.13:0,39,754	1/1:1,20:21:60.20:919,60,0	1/1:0,17:17:45.15:689,45,0	0/0:26,0:26:75.26:0,75,1422	1/1:1,22:23:63.21:964,63,0	1/1:3,15:18:36.12:546,36,0	1/1:2,21:23:57.19:873,57,0	0/0:34,0:34:69.24:0,69,1334	0/0:23,0:23:57.14:0,57,1024	1/1:0,18:18:48.16:735,48,0	1/1:0,13:13:39.13:586,39,0	1/1:0,18:18:42.14:643,42,0	1/1:3,24:27:63.21:965,63,0	1/1:0,17:16:38.73:597,39,0	0/0:19,0:19:54.19:0,54,1038	0/0:24,0:24:69.24:0,69,1327	1/1:1,13:14:39.13:595,39,0	0/0:27,0:27:75.26:0,75,1429	1/1:1,20:20:57.19:872,57,0	0/0:11,0:11:33.11:0,33,638
chr10	36736002	.	C	CT	5099.84	PASS	AB=0.887;AC=47;AF=0.839;AN=56;BaseQRankSum=2.591;DP=606;FS=0.618;HRun=14;HaplotypeScore=116.7064;InbreedingCoeff=0.3718;MQ=67.43;MQ0=1;MQRankSum=-2.171;QD=9.12;ReadPosRankSum=-3.885;VQSLOD=2.8519;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:35:48.22:261,48,0	1/1:5,2:7:11.94:95,12,0	1/1:12,0:9:2.19:33,2,0	0/1:12,0:9:0.49:0,0,13	1/1:5,14:20:32.23:234,32,0	1/1:25,0:35:39.41:288,39,0	1/1:21,0:26:39.36:210,39,0	1/1:10,10:20:19.65:275,20,0	1/1:14,5:19:14.67:211,15,0	1/1:27,0:29:29.50:175,29,0	1/1:11,1:13:4.09:18,4,0	0/1:19,0:19:22.68:23,0,91	1/1:22,4:26:38.64:285,39,0	1/1:10,7:17:35.92:295,36,0	1/1:17,1:21:28.14:172,28,0	1/1:7,24:35:29.84:256,30,0	1/1:8,16:25:28.08:228,28,0	1/1:13,1:19:26.33:149,26,0	1/1:16,8:27:26.06:336,26,0	1/1:16,2:18:35.99:275,36,0	0/1:16,0:16:7.01:78,0,7	1/1:16,3:19:11.57:203,12,0	0/0:14,0:16:6.90:0,7,74	0/0:30,1:31:20.45:0,20,261	1/1:9,16:25:44.93:378,45,0	0/1:15,10:25:13.87:98,0,14	1/1:16,9:25:42.14:444,42,0	0/1:7,3:11:3.18:80,0,3
chr10	36738864	.	A	AT	2328.74	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-6.832;DP=422;FS=19.608;HRun=8;HaplotypeScore=40.8497;InbreedingCoeff=0.9744;MQ=72.40;MQ0=0;MQRankSum=2.599;QD=28.40;ReadPosRankSum=0.116;VQSLOD=1.9083;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:42.02:0,42,384	0/0:5,0:5:15.01:0,15,137	0/0:11,0:12:15.45:0,15,134	0/0:9,0:9:15:0,15,136	1/1:1,20:21:57.17:658,57,0	0/0:14,0:14:33.01:0,33,302	0/0:16,0:16:48.01:0,48,434	0/0:18,0:18:54:0,54,483	1/1:0,7:7:21.06:242,21,0	0/0:24,0:24:63.03:0,63,577	0/0:13,0:13:36.02:0,36,330	0/0:17,0:17:51.01:0,51,462	0/0:21,0:21:60.03:0,60,549	0/0:16,0:16:47.97:0,48,430	0/0:18,0:18:46.84:0,47,417	1/1:0,19:19:54.16:623,54,0	1/1:0,11:11:30.09:346,30,0	0/0:10,0:10:27.01:0,27,247	0/0:19,0:19:53.98:0,54,485	0/0:22,0:22:59.85:0,60,531	0/0:24,0:24:65.76:0,66,588	0/0:10,0:10:30.02:0,30,275	0/0:19,0:19:54.03:0,54,494	0/0:14,0:14:30:0,30,275	0/0:10,0:10:30:0,30,269	1/1:3,13:15:39.10:439,39,0	0/0:11,0:11:8.46:0,8,250	1/1:1,7:8:18.05:208,18,0
chr10	36738957	.	ACTCACTCACTCTCT	A	7998.94	PASS	AB=0.917;AC=21;AF=0.375;AN=56;BaseQRankSum=6.940;DP=530;FS=10.042;HRun=0;HaplotypeScore=253.2346;InbreedingCoeff=0.6286;MQ=58.36;MQ0=7;MQRankSum=-8.169;QD=44.44;ReadPosRankSum=0.445;VQSLOD=3.0182;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:8,10:18:4.40:194,0,4	0/0:9,0:9:21.96:0,22,1068	0/0:36,0:16:39.13:0,39,1627	0/0:57,0:34:55.23:0,55,2210	0/1:14,0:14:99:256,0,105	1/1:11,3:14:30.10:917,30,0	1/1:18,1:19:33.11:759,33,0	0/0:29,0:28:61.14:0,61,1685	0/1:10,0:10:31.07:379,0,31	1/1:15,4:19:57.20:1828,57,0	1/1:8,1:9:21.07:609,21,0	0/0:15,0:15:42.13:0,42,2107	0/0:20,0:20:54.16:0,54,2493	0/0:22,0:22:56.60:0,57,2469	1/1:16,4:20:42.61:1148,43,0	0/1:15,0:15:26.94:462,0,27	1/1:11,0:11:20.74:310,21,0	1/1:8,2:10:18.06:614,18,0	0/0:12,0:11:29.56:0,30,965	0/0:20,0:20:45.10:0,45,2045	0/0:30,0:30:30.07:0,30,1411	0/0:22,0:22:33.64:0,34,1591	0/0:19,0:19:48.16:0,48,2886	0/0:25,0:25:63.22:0,63,3453	0/0:12,0:12:27.06:0,27,1097	0/1:16,1:16:99:451,0,102	0/0:22,0:21:60.18:0,60,2977	1/1:4,0:4:8.97:71,9,0
chr10	36738959	.	TCACTCA	T	6100.68	PASS	AB=0.900;AC=25;AF=0.446;AN=56;BaseQRankSum=4.984;DP=527;FS=8.918;HRun=0;HaplotypeScore=193.9283;InbreedingCoeff=0.9060;MQ=56.04;MQ0=7;MQRankSum=-5.920;QD=34.86;ReadPosRankSum=1.035;VQSLOD=4.0130;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:16,2:18:15.50:26,0,16	0/0:9,0:9:18.95:0,19,457	0/0:35,0:15:38.76:0,39,958	0/0:57,0:33:41.14:0,41,1337	1/1:9,5:14:30.57:597,31,0	1/1:5,8:13:30.06:369,30,0	1/1:15,4:19:21.66:404,22,0	0/0:30,0:29:20.01:0,20,605	1/1:5,5:10:24.55:511,25,0	1/1:12,7:19:50.60:1006,51,0	1/1:3,6:9:20.93:234,21,0	0/0:15,0:15:42.13:0,42,1056	0/0:22,0:22:50.83:0,51,1169	0/0:22,0:22:46.66:0,47,963	1/1:13,8:21:27.89:434,28,0	1/1:5,8:13:33.11:705,33,0	1/1:7,4:11:21.07:376,21,0	1/1:5,2:7:18.06:312,18,0	0/0:13,0:12:8.01:0,8,363	0/0:20,0:20:45.07:0,45,925	0/0:30,0:30:24.79:0,25,522	0/0:22,0:22:30.63:0,31,661	0/0:17,0:17:48.16:0,48,1556	0/0:26,0:26:66.23:0,66,1982	0/0:11,0:11:20.10:0,20,448	1/1:6,11:16:48.16:1056,48,0	0/0:23,0:22:54.70:0,55,1161	1/1:4,0:4:8.97:71,9,0
chr10	36738977	.	TCTCTCTCTCACACA	T	6653.46	PASS	AB=1.000;AC=23;AF=0.426;AN=54;BaseQRankSum=12.286;DP=575;FS=7.309;HRun=0;HaplotypeScore=297.2776;InbreedingCoeff=0.8881;MQ=46.13;MQ0=22;MQRankSum=-10.522;QD=33.60;ReadPosRankSum=0.019;VQSLOD=2.5775;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:22,2:23:14.54:215,15,0	0/0:8,0:8:18.06:0,18,898	0/0:34,0:7:18.06:0,18,550	0/0:65,0:23:38.58:0,39,1154	0/1:12,0:12:19.18:159,0,19	1/1:8,7:16:18.51:705,19,0	1/1:10,4:14:20.95:438,21,0	0/0:32,0:31:93.28:0,93,2226	1/1:20,0:20:22.53:609,23,0	1/1:9,7:16:19.82:1091,20,0	1/1:4,6:10:18.06:432,18,0	0/0:24,0:24:62.89:0,63,2856	0/0:25,0:25:63.05:0,63,2810	0/0:29,0:29:58.38:0,58,2335	1/1:15,8:23:8.16:814,8,0	1/1:17,0:17:25.05:660,25,0	1/1:14,0:14:23.08:367,23,0	1/1:7,2:9:14.79:347,15,0	0/0:14,0:13:36.12:0,36,1435	0/0:19,0:19:6.34:0,6,1708	0/0:27,0:27:30.10:0,30,1204	0/0:15,0:15:27.09:0,27,1203	0/0:17,0:17:51.18:0,51,2631	0/0:28,0:28:72.23:0,72,3755	0/0:13,0:13:24.01:0,24,1170	1/1:23,0:22:26.65:816,27,0	0/0:24,0:23:62.20:0,62,2766	./.
chr10	36738983	.	TCTCACACA	T	5129.75	PASS	AC=24;AF=0.444;AN=54;BaseQRankSum=12.032;DP=562;FS=6.044;HRun=0;HaplotypeScore=251.2497;InbreedingCoeff=0.9291;MQ=46.52;MQ0=24;MQRankSum=-9.474;QD=25.39;ReadPosRankSum=-0.049;VQSLOD=3.8499;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:22:13.45:191,13,0	0/0:8,0:8:18.03:0,18,437	0/0:32,0:5:11.95:0,12,92	0/0:59,0:15:23.66:0,24,297	1/1:8,1:9:4.71:129,5,0	1/1:18,0:18:17:392,17,0	1/1:17,0:17:21.04:296,21,0	0/0:32,0:31:89.70:0,90,1140	1/1:17,2:20:24.47:524,24,0	1/1:17,0:17:47.98:732,48,0	1/1:11,0:11:18.04:239,18,0	0/0:19,0:19:50.40:0,50,1827	0/0:26,0:26:66.19:0,66,1668	0/0:28,0:28:52.33:0,52,1156	1/1:25,0:25:13.53:505,14,0	1/1:16,1:17:25.27:629,25,0	1/1:13,1:14:26.49:458,26,0	1/1:9,0:9:14.71:236,15,0	0/0:17,0:16:47.97:0,48,1025	0/0:17,0:17:1.33:0,1,799	0/0:27,0:26:24.05:0,24,509	0/0:13,0:13:21.05:0,21,531	0/0:20,0:20:57.05:0,57,1580	0/0:27,0:27:51.49:0,51,2310	0/0:11,0:11:20.87:0,21,628	1/1:22,0:21:40.98:800,41,0	0/0:23,0:22:56.19:0,56,1568	./.
chr10	36738985	.	TCACACA	T	4968.54	PASS	AB=1.000;AC=25;AF=0.481;AN=52;BaseQRankSum=10.935;DP=546;FS=6.441;HRun=0;HaplotypeScore=236.9815;InbreedingCoeff=0.8841;MQ=49.20;MQ0=23;MQRankSum=-8.496;QD=22.69;ReadPosRankSum=-1.642;VQSLOD=3.6570;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:21,2:22:13.83:277,14,0	0/0:7,0:7:12.04:0,12,269	./.	0/0:53,0:14:8.15:0,8,178	1/1:3,5:9:6.49:119,6,0	1/1:18,0:18:16.96:279,17,0	1/1:11,6:17:21.07:308,21,0	0/0:32,0:32:71.86:0,72,848	1/1:9,10:20:27.56:517,28,0	1/1:15,2:17:36.62:648,37,0	1/1:12,0:12:17.69:199,18,0	0/0:19,0:19:42.50:0,42,1483	0/0:26,0:26:61.76:0,62,1196	0/0:28,0:28:43.26:0,43,766	1/1:23,2:25:41.44:560,41,0	1/1:4,9:16:30.10:606,30,0	1/1:10,4:14:27.05:443,27,0	1/1:10,0:10:9.03:181,9,0	0/0:18,0:17:47.97:0,48,826	0/1:18,0:18:7.85:8,0,446	0/0:25,0:24:14.97:0,15,289	0/0:12,0:12:15.05:0,15,325	0/0:20,0:20:48.15:0,48,1253	0/0:27,0:27:63.20:0,63,1817	0/0:11,0:11:20.97:0,21,464	1/1:6,11:19:43.39:823,43,0	0/0:23,0:22:50.19:0,50,1095	./.
chr10	36739000	.	C	CTT	1011.26	PASS	AB=0.969;AC=16;AF=0.308;AN=52;BaseQRankSum=9.824;DP=554;FS=5.619;HRun=0;HaplotypeScore=225.0094;InbreedingCoeff=0.4232;MQ=45.80;MQ0=24;MQRankSum=-8.351;QD=4.79;ReadPosRankSum=-5.918;VQSLOD=1.1350;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:12,3:14:13.91:136,14,0	0/0:5,0:5:12.04:0,12,193	./.	0/1:52,0:8:15.09:15,0,140	0/1:9,0:9:13.49:55,0,13	1/1:11,9:21:17.48:244,17,0	1/1:18,0:18:16.97:140,17,0	0/0:33,0:33:97.99:0,98,951	0/1:22,0:22:12.58:13,0,264	0/1:10,3:13:48.57:136,0,49	1/1:7,4:11:14.88:94,15,0	0/0:23,0:22:63.08:0,63,948	0/0:29,0:29:66.07:0,66,822	0/0:33,0:33:37.92:0,38,465	1/1:13,9:22:29.10:251,29,0	0/1:18,0:17:47.55:48,0,203	0/0:12,0:13:5.84:0,6,146	0/1:10,0:10:15.27:59,0,15	0/0:23,0:22:64.07:0,64,681	0/0:17,0:17:22.09:0,22,350	0/0:22,0:21:15.05:0,15,208	0/0:14,0:14:14.69:0,15,215	0/0:17,0:17:51.17:0,51,814	0/0:32,0:32:71.89:0,72,1145	0/0:13,0:13:23.97:0,24,352	0/0:19,1:19:6.51:0,7,312	0/0:22,0:21:42.51:0,43,582	./.
chr10	36739008	.	T	TTCTCTCTC	4438.79	PASS	AB=1.000;AC=29;AF=0.537;AN=54;BaseQRankSum=2.002;DP=638;FS=0.000;HRun=0;HaplotypeScore=272.5899;InbreedingCoeff=0.5213;MQ=48.07;MQ0=26;MQRankSum=-4.786;QD=11.87;ReadPosRankSum=-0.402;VQSLOD=3.1028;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:17:9.47:222,9,0	1/1:4,0:4:2.96:19,3,0	0/0:34,0:5:7.56:0,8,80	0/0:65,0:16:4.50:0,4,147	0/0:10,0:10:10.62:0,11,73	1/1:25,0:25:38.04:896,38,0	1/1:10,8:23:3:123,3,0	1/1:41,0:41:64.49:501,64,0	0/0:23,0:24:51.76:0,52,768	1/1:21,0:21:51.09:885,51,0	1/1:13,0:13:15.05:372,15,0	0/0:25,0:24:49.03:0,49,1074	1/1:32,0:32:23.79:113,24,0	0/1:32,0:32:33.80:41,0,34	1/1:28,0:28:28.67:871,29,0	0/0:25,0:24:32.45:0,32,636	0/0:16,0:16:17.71:0,18,293	1/1:4,6:13:3.01:125,3,0	0/1:23,0:22:14.94:125,0,15	0/1:17,0:17:0.71:1,0,1	1/1:25,0:24:3.06:8,3,0	0/1:11,0:11:0.08:0,0,0	0/0:20,0:20:2.14:0,2,730	0/0:31,0:31:70.07:0,70,1285	0/0:12,0:12:1.56:0,2,36	0/1:23,0:22:33.58:34,0,588	1/1:26,0:25:17.24:102,17,0	./.
chr10	36739029	.	ACT	A	2601.78	PASS	AB=0.879;AC=12;AF=0.214;AN=56;BaseQRankSum=1.740;DP=670;FS=2.786;HRun=0;HaplotypeScore=193.9353;InbreedingCoeff=0.6899;MQ=56.99;MQ0=11;MQRankSum=-1.083;QD=21.15;ReadPosRankSum=3.464;VQSLOD=4.2417;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:11.71:0,12,131	0/0:3,0:3:3.01:0,3,46	0/0:43,0:22:11.33:0,11,609	0/0:60,0:21:39.45:0,39,428	1/1:5,8:13:24.08:301,24,0	0/0:27,0:27:54.07:0,54,790	0/0:24,0:24:24.07:0,24,356	0/0:42,0:42:98.34:0,98,1045	1/1:7,16:23:60.08:740,60,0	0/0:22,0:22:21.35:0,21,652	0/0:12,0:12:18.06:0,18,274	0/0:25,0:25:64.10:0,64,1033	0/0:33,0:33:44.81:0,45,571	0/0:37,0:37:55.94:0,56,684	0/0:31,0:31:44.71:0,45,679	1/1:20,11:30:78.21:970,78,0	1/1:12,5:18:6.28:266,6,0	0/0:17,0:17:21.94:0,22,294	0/0:17,0:16:24.63:0,25,329	0/0:22,0:22:27.32:0,27,293	0/0:26,0:26:12.04:0,12,183	0/0:9,0:9:14.06:0,14,171	0/0:19,0:19:36.12:0,36,589	0/0:35,0:35:84.26:0,84,1326	0/1:11,0:11:5.24:5,0,145	0/1:17,8:24:25.89:449,0,26	0/0:21,0:21:31.60:0,32,377	1/1:2,0:1:3.01:37,3,0
chr10	36739250	.	GT	G	10268.45	PASS	AB=1.000;AC=47;AF=0.839;AN=56;BaseQRankSum=7.340;DP=666;FS=1.413;HRun=5;HaplotypeScore=101.9614;InbreedingCoeff=0.8495;MQ=70.66;MQ0=2;MQRankSum=-2.535;QD=17.61;ReadPosRankSum=1.466;VQSLOD=4.2513;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,23:25:57.16:645,57,0	1/1:11,0:11:19.50:105,19,0	0/1:18,0:12:14.94:15,0,177	0/0:17,0:12:8.65:0,9,135	1/1:35,0:35:92.07:640,92,0	1/1:1,26:27:63.14:699,63,0	1/1:2,21:23:54.15:611,54,0	1/1:34,0:34:79.17:445,79,0	1/1:23,0:23:53.56:381,54,0	1/1:0,33:33:93.15:983,93,0	1/1:1,30:31:78.10:853,78,0	0/0:26,0:26:78.22:0,78,1018	1/1:13,0:13:17.31:115,17,0	1/1:24,0:24:54.25:286,54,0	1/1:1,31:32:72.20:815,72,0	1/1:25,0:24:35.71:257,36,0	1/1:28,0:28:53.57:383,54,0	1/1:0,20:20:60.17:679,60,0	1/1:18,0:18:39.48:217,39,0	1/1:40,0:40:82.12:410,82,0	1/1:9,0:9:19.23:108,19,0	1/1:16,0:16:36.41:179,36,0	0/0:23,0:23:66.17:0,66,837	0/0:17,0:17:48.14:0,48,622	1/1:24,0:24:40.21:249,40,0	1/1:37,0:37:99:725,101,0	1/1:27,0:27:50.67:258,51,0	1/1:10,0:10:29.75:211,30,0
chr10	36739254	.	T	TA	4485.37	PASS	AB=1.000;AC=22;AF=0.393;AN=56;BaseQRankSum=-9.429;DP=655;FS=8.817;HRun=0;HaplotypeScore=122.7074;InbreedingCoeff=0.8338;MQ=72.32;MQ0=2;MQRankSum=1.559;QD=18.01;ReadPosRankSum=-1.421;VQSLOD=6.3386;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:49.33:0,49,191	1/1:2,9:11:10.26:227,10,0	0/1:19,0:13:25.16:25,0,217	0/1:18,0:13:23.72:24,0,174	0/0:0,0:34:33.33:0,33,140	0/0:26,0:26:51.93:0,52,202	0/0:22,0:22:46.73:0,47,182	1/1:6,29:35:78.34:767,78,0	0/0:0,0:23:31.33:0,31,92	0/0:34,0:34:48.12:0,48,256	0/0:31,0:31:74.17:0,74,323	0/0:26,0:26:78.25:0,78,1073	1/1:4,9:14:11.10:252,11,0	1/1:6,17:23:42.89:477,43,0	0/0:31,0:31:62.31:0,62,243	0/0:0,0:23:21.80:0,22,64	0/0:0,0:25:32.71:0,33,97	0/0:20,0:20:51.93:0,52,201	1/1:6,9:16:31.96:327,32,0	1/1:4,34:38:87.57:883,88,0	1/1:2,8:10:14.78:143,15,0	1/1:3,12:15:39.06:381,39,0	0/0:24,0:24:69.21:0,69,932	0/0:16,0:16:48.16:0,48,670	1/1:6,18:24:21.09:412,21,0	0/0:0,0:37:65.18:0,65,217	1/1:6,20:26:55.81:568,56,0	0/0:0,0:10:18.61:0,19,55
chr10	36739830	.	CG	C	5822.82	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=18.824;DP=748;FS=4.135;HRun=6;HaplotypeScore=104.6341;InbreedingCoeff=0.9804;MQ=77.28;MQ0=1;MQRankSum=-1.591;QD=26.83;ReadPosRankSum=-0.629;VQSLOD=4.2497;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,51:59:99:1667,161,0	0/0:8,0:8:21.07:0,21,274	0/0:15,0:15:36.08:0,36,432	0/0:21,0:21:48.12:0,48,596	0/0:27,0:27:75.23:0,75,970	1/1:0,18:18:45.11:482,45,0	1/1:3,22:26:69.17:741,69,0	0/0:18,0:18:51.11:0,51,634	0/0:25,0:25:75.24:0,75,987	1/1:3,30:33:87.22:935,87,0	1/1:3,17:20:51.13:548,51,0	0/0:36,0:36:99:0,105,1369	0/0:33,0:33:87.27:0,87,1128	0/0:38,0:38:99:0,108,1390	1/1:4,18:22:45.11:484,45,0	0/0:32,0:32:90.25:0,90,1157	0/0:35,0:35:99:0,99,1270	1/1:5,33:37:90.22:966,90,0	0/0:31,0:31:75.19:0,75,962	0/0:20,0:20:57.18:0,57,740	0/0:44,0:44:99:0,120,1503	0/0:22,0:22:57.11:0,57,709	0/0:25,0:25:63.15:0,63,795	0/0:29,0:29:81.22:0,81,1046	0/0:17,0:17:48.13:0,48,615	0/0:28,1:29:52.02:0,52,1032	0/0:21,0:21:63.20:0,63,829	0/0:5,0:5:6.02:0,6,79
chr10	36741923	.	AT	A	6462.10	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=6.586;DP=557;FS=3.492;HRun=11;HaplotypeScore=118.2903;InbreedingCoeff=0.9741;MQ=71.00;MQ0=1;MQRankSum=-2.870;QD=13.72;ReadPosRankSum=3.834;VQSLOD=4.6894;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,0:22:34.63:101,35,0	1/1:1,5:6:11.98:98,12,0	0/0:22,0:15:17.19:0,17,227	0/0:21,1:12:16.25:0,16,141	1/1:3,20:24:55.64:418,56,0	1/1:1,0:21:35.39:107,35,0	1/1:4,0:11:14.24:42,14,0	1/1:7,25:33:48.02:567,48,0	1/1:0,8:9:20.02:154,20,0	1/1:4,0:34:60.10:181,60,0	1/1:2,0:19:30.55:89,31,0	0/0:14,0:14:33.03:0,33,338	1/1:4,9:13:22.79:177,23,0	1/1:3,19:22:52.49:422,52,0	1/1:5,0:28:37.41:114,37,0	1/1:1,18:19:41.95:345,42,0	1/1:2,22:25:56.92:467,57,0	1/1:4,0:19:26.47:77,26,0	1/1:3,14:17:41.93:342,42,0	1/1:3,20:23:59.80:478,60,0	1/1:3,15:18:38.94:320,39,0	1/1:0,21:21:53.78:428,54,0	0/0:17,0:17:45.11:0,45,480	0/0:10,0:10:21.03:0,21,215	1/1:1,12:14:34.99:277,35,0	1/1:7,17:27:54.88:410,55,0	1/1:2,27:29:65.92:541,66,0	1/1:4,13:17:12.92:307,13,0
chr10	36743635	.	TA	T	721.10	PASS	AB=0.741;AC=17;AF=0.304;AN=56;BaseQRankSum=-1.454;DP=592;FS=1.048;HRun=17;HaplotypeScore=103.1954;InbreedingCoeff=0.3565;MQ=77.21;MQ0=1;MQRankSum=5.160;QD=2.99;ReadPosRankSum=3.202;VQSLOD=0.0554;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:22,6:28:2.47:2,0,241	0/1:5,4:9:12.25:38,0,12	0/0:25,0:20:14.74:0,15,115	0/0:27,0:20:5.13:0,5,42	0/0:25,0:22:46.17:0,46,236	0/0:18,0:20:4.03:0,4,114	0/1:15,1:18:7.81:8,0,106	1/1:11,14:28:37.66:193,38,0	0/0:16,0:15:18.31:0,18,101	0/0:25,2:27:11.59:0,12,248	0/0:18,1:23:14.31:0,14,257	0/0:14,1:18:7:0,7,191	1/1:14,11:28:14.68:128,15,0	0/1:11,5:16:15.42:22,0,15	0/0:24,0:25:14.81:0,15,189	0/0:11,0:17:28.75:0,29,157	0/0:23,0:22:32.73:0,33,173	0/0:15,3:18:1.64:0,2,98	1/1:7,9:17:5.42:116,5,0	1/1:9,7:16:11.13:62,11,0	1/1:9,10:19:9.70:53,10,0	0/1:7,8:17:1.58:81,0,2	0/0:13,0:17:6.72:0,7,109	0/0:28,5:33:21.49:0,21,234	0/1:9,14:23:15.60:118,0,16	0/0:25,0:25:36.35:0,36,246	0/1:13,9:21:43.31:72,0,43	0/0:9,0:10:15.65:0,16,81
chr10	36744618	.	TTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	T	1987.16	PASS	AB=0.919;AC=15;AF=0.268;AN=56;BaseQRankSum=0.510;DP=486;FS=9.111;HRun=0;HaplotypeScore=358.0358;InbreedingCoeff=0.4506;MQ=64.18;MQ0=15;MQRankSum=-1.136;QD=14.09;ReadPosRankSum=1.244;VQSLOD=0.7803;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:23:3.61:0,4,745	1/1:6,3:9:3.01:272,3,0	0/0:13,0:9:3.01:0,3,73	0/0:25,0:18:6.02:0,6,113	0/0:22,0:22:17.27:0,17,760	0/0:22,0:22:3.01:0,3,296	0/0:23,0:22:23.29:0,23,1641	0/1:27,0:26:4.50:253,0,4	0/0:18,0:17:21.07:0,21,1386	0/0:19,0:18:33.47:0,33,1415	0/0:10,0:10:6.02:0,6,676	0/0:16,0:14:21.07:0,21,1615	0/1:15,0:18:15.86:413,0,16	1/1:17,1:17:9.02:415,9,0	0/0:14,0:14:18.05:0,18,826	0/0:15,0:15:18.06:0,18,1508	0/0:21,0:21:29.19:0,29,1573	0/0:15,0:15:24.08:0,24,1190	1/1:9,1:9:3.01:272,3,0	1/1:16,4:20:2.74:272,3,0	1/1:12,0:11:5.71:59,6,0	0/1:8,0:9:31.18:71,0,31	0/0:15,0:15:6.02:0,6,524	0/0:29,0:27:31.66:0,32,2124	0/0:14,0:14:0:0,0,0	0/0:19,0:19:12.04:0,12,765	1/1:18,0:16:6.02:115,6,0	0/0:9,0:7:9.03:0,9,817
chr10	36744644	.	C	CA	278.13	PASS	AB=0.615;AC=9;AF=0.167;AN=54;BaseQRankSum=1.097;DP=350;FS=23.710;HRun=0;HaplotypeScore=57.5497;InbreedingCoeff=0.5672;MQ=46.88;MQ0=34;MQRankSum=2.063;QD=10.70;ReadPosRankSum=-4.016;VQSLOD=1.2197;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:21:17.37:0,17,248	0/0:3,0:3:2.22:0,2,7	0/0:1,0:1:3.01:0,3,41	0/0:9,0:4:6.02:0,6,79	0/0:19,0:19:27.09:0,27,369	0/0:17,0:16:9.50:0,10,125	0/0:23,0:22:36.59:0,37,495	0/1:3,5:6:3.93:150,0,4	0/0:18,0:17:39.04:0,39,538	0/0:18,0:15:40.48:0,40,521	0/0:12,0:12:18.04:0,18,218	0/0:16,0:11:21.07:0,21,290	0/0:8,0:8:7.44:0,7,40	1/1:3,1:4:1.44:62,1,0	0/0:15,0:12:27.08:0,27,356	0/0:17,0:15:26.69:0,27,371	0/0:25,0:23:45.40:0,45,589	0/0:16,0:14:39.10:0,39,518	0/0:2,0:1:2.22:0,2,7	0/0:5,0:4:2.22:0,2,7	1/1:4,0:2:5.98:59,6,0	1/1:5,0:5:2.88:43,3,0	0/0:13,0:11:24.06:0,24,309	0/0:31,0:28:51.43:0,51,675	./.	0/0:21,0:20:54.17:0,54,720	1/1:5,0:2:6.02:91,6,0	0/0:12,0:9:27.07:0,27,356
chr10	36744718	.	ACAGTTATG	A	18516.65	PASS	AB=0.955;AC=35;AF=0.625;AN=56;BaseQRankSum=15.816;DP=530;FS=3.047;HRun=0;HaplotypeScore=155.2259;InbreedingCoeff=0.9193;MQ=82.42;MQ0=1;MQRankSum=-16.578;QD=54.95;ReadPosRankSum=0.718;VQSLOD=4.9715;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,16:18:33.11:895,33,0	1/1:5,6:11:15.05:407,15,0	0/0:21,0:21:51.17:0,51,1896	0/0:21,0:21:48.16:0,48,1729	0/0:26,0:26:75.26:0,75,3091	1/1:3,18:21:51.18:1383,51,0	1/1:3,17:20:45.15:1220,45,0	1/1:12,20:32:60.19:1566,60,0	0/0:19,0:19:54.19:0,54,2258	1/1:1,20:21:60.21:1571,60,0	1/1:3,12:15:33.11:894,33,0	0/0:21,0:21:63.22:0,63,2711	1/1:5,19:24:57.20:1545,57,0	1/1:6,16:22:48.16:1301,48,0	1/1:0,10:10:30.10:813,30,0	0/0:19,0:19:54.19:0,54,2329	0/0:16,0:14:39.13:0,39,1629	1/1:3,8:11:24.04:589,24,0	1/1:4,13:17:39.13:1058,39,0	1/1:6,16:22:45.15:1176,45,0	1/1:6,6:12:17.98:418,18,0	1/1:2,18:20:51.09:1233,51,0	0/0:18,0:18:51.18:0,51,2164	0/0:25,0:25:72.25:0,72,2991	1/1:3,11:14:32.98:710,33,0	0/1:20,1:21:30:30,0,2018	1/1:3,23:26:62.95:1708,63,0	0/0:7,0:7:21.07:0,21,821
chr10	36746885	.	A	AC	2761.51	PASS	AB=1.000;AC=45;AF=0.804;AN=56;BaseQRankSum=-1.721;DP=396;FS=18.783;HRun=1;HaplotypeScore=77.3139;InbreedingCoeff=0.7177;MQ=68.29;MQ0=10;MQRankSum=-0.231;QD=11.41;ReadPosRankSum=-0.107;VQSLOD=0.4856;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,0:6:11.96:94,12,0	1/1:6,0:6:6.05:82,6,0	0/0:54,0:25:14.87:0,15,189	0/0:50,0:23:6.33:0,6,146	1/1:19,1:19:12.81:186,13,0	1/1:6,0:6:12.83:94,13,0	1/1:9,0:9:19.77:96,20,0	1/1:10,0:9:20.20:145,20,0	1/1:10,1:8:2.28:93,2,0	1/1:10,0:9:20.18:123,20,0	1/1:10,0:10:16.23:122,16,0	0/0:14,0:14:35.45:0,35,258	1/1:7,0:7:13.60:78,14,0	1/1:6,0:6:8.53:48,9,0	1/1:9,0:8:19.22:134,19,0	1/1:5,1:6:17.22:142,17,0	1/1:16,2:19:30.71:289,31,0	0/1:16,0:17:24.34:55,0,24	1/1:12,1:11:8.07:78,8,0	1/1:13,0:13:21.77:141,22,0	1/1:4,0:4:8.84:55,9,0	1/1:7,0:6:14.84:103,15,0	0/0:13,0:12:23.47:0,23,193	0/0:16,0:15:26.78:0,27,223	1/1:13,0:12:26.09:142,26,0	1/1:17,1:18:44.94:364,45,0	1/1:16,0:16:34.38:235,34,0	1/1:2,0:2:5.83:36,6,0
chr10	36746899	.	T	TA	1474.48	PASS	AB=0.994;AC=27;AF=0.482;AN=56;BaseQRankSum=-2.818;DP=408;FS=4.970;HRun=8;HaplotypeScore=82.1671;InbreedingCoeff=0.4175;MQ=78.41;MQ0=13;MQRankSum=-1.100;QD=6.58;ReadPosRankSum=-0.065;VQSLOD=0.9867;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:5,0:5:17.24:17,0,17	1/1:1,4:6:11.80:100,12,0	0/1:69,0:36:2.68:3,0,242	0/0:65,0:23:19.03:0,19,138	0/0:16,0:16:25.23:0,25,198	0/0:5,0:5:0.02:0,0,55	0/1:12,0:12:15.66:33,0,16	1/1:5,4:9:11.06:110,11,0	0/0:9,0:9:24.74:0,25,134	0/1:5,0:5:10.22:10,0,39	0/1:8,0:8:6.93:7,0,21	0/0:12,0:12:1.43:0,1,141	1/1:2,4:6:8.97:87,9,0	1/1:1,7:8:8.97:88,9,0	0/1:8,0:8:19.08:19,0,21	0/0:10,0:10:23.45:0,23,140	0/0:24,0:24:52.26:0,52,303	0/1:18,0:18:15.70:24,0,16	1/1:4,6:10:23.97:238,24,0	1/1:5,8:14:20.91:200,21,0	1/1:0,7:7:15.04:169,15,0	1/1:1,4:5:6.02:69,6,0	0/0:9,1:10:23.66:0,24,194	0/0:9,0:9:20.87:0,21,172	1/1:6,4:11:12.66:118,13,0	0/0:18,0:18:37.34:0,37,301	1/1:6,12:18:14.64:375,15,0	0/0:2,0:2:5.30:0,5,25
chr10	36746907	.	AGG	A	1415.03	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-2.846;DP=507;FS=18.279;HRun=10;HaplotypeScore=82.5236;InbreedingCoeff=0.9081;MQ=75.76;MQ0=46;MQRankSum=0.194;QD=16.65;ReadPosRankSum=4.045;VQSLOD=0.7085;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:7:12.03:0,12,157	0/0:8,0:8:18.06:0,18,231	0/0:103,0:38:69.48:0,69,862	0/0:103,1:23:32.51:0,33,364	1/1:6,13:19:34.61:369,35,0	0/0:3,0:6:9.02:0,9,95	0/0:6,0:15:27.06:0,27,297	0/0:11,0:11:23.81:0,24,300	1/1:5,5:10:11.99:134,12,0	0/0:5,0:7:8.92:0,9,78	0/0:9,0:10:14.99:0,15,157	0/0:8,0:8:18.06:0,18,284	0/0:7,0:7:12.04:0,12,161	0/0:10,0:10:11.07:0,11,121	0/0:2,0:10:15.02:0,15,144	1/1:1,8:9:21.05:234,21,0	1/1:6,16:22:39.08:435,39,0	0/0:4,0:15:18.03:0,18,185	0/0:11,0:11:24.07:0,24,310	0/0:12,0:12:15.04:0,15,179	0/0:7,0:7:15.03:0,15,165	0/0:9,0:9:18.05:0,18,233	0/0:12,0:13:27.08:0,27,401	0/0:11,0:11:24.04:0,24,348	0/0:13,0:13:30.05:0,30,378	1/1:8,13:20:34.85:360,35,0	0/0:21,0:21:54.07:0,54,658	1/1:2,1:2:6.01:63,6,0
chr10	36746996	.	G	GAAA	1493.62	PASS	AB=0.944;AC=16;AF=0.286;AN=56;BaseQRankSum=1.277;DP=434;FS=0.000;HRun=13;HaplotypeScore=65.3905;InbreedingCoeff=0.8255;MQ=55.89;MQ0=12;MQRankSum=-2.651;QD=11.85;ReadPosRankSum=0.295;VQSLOD=0.4748;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,12:24:21.24:282,21,0	0/0:5,0:6:7.41:0,7,94	0/1:3,0:1:0:0,0,0	0/0:10,0:7:8.60:0,9,70	0/0:24,0:25:45.22:0,45,471	1/1:4,9:16:15.03:237,15,0	1/1:16,2:20:20.99:318,21,0	0/0:27,0:26:40.13:0,40,439	0/0:8,0:6:14.96:0,15,138	1/1:7,8:17:24.04:366,24,0	1/1:12,1:14:16.42:125,16,0	0/0:10,0:12:8.12:0,8,85	0/0:9,0:9:14.91:0,15,156	0/1:7,0:8:4.83:5,0,143	1/1:7,4:10:12.04:214,12,0	0/0:6,0:8:20.90:0,21,192	0/0:40,0:41:78.20:0,78,786	1/1:11,0:10:11.16:136,11,0	0/0:20,0:17:30.42:0,30,303	0/0:9,0:11:17.34:0,17,157	0/0:11,0:9:22.81:0,23,194	0/0:4,0:4:5.96:0,6,65	0/0:20,0:20:34.09:0,34,384	0/0:20,0:23:46.11:0,46,475	0/0:18,0:18:26.86:0,27,257	0/0:12,0:13:29.76:0,30,280	0/0:12,0:11:17.85:0,18,187	0/0:22,0:19:44.47:0,44,482
chr10	36747759	.	C	CCAAACAAGCAGCAAT	87216.35	PASS	AB=0.782;AC=34;AF=0.607;AN=56;BaseQRankSum=-1.072;DP=888;FS=5.694;HRun=0;HaplotypeScore=321.3112;InbreedingCoeff=0.8499;MQ=79.31;MQ0=0;MQRankSum=-21.977;QD=147.08;ReadPosRankSum=-1.133;VQSLOD=3.6925;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:25,20:46:99:7388,120,0	1/1:7,7:15:42.08:2543,42,0	0/0:31,0:31:71.31:0,71,2359	0/0:30,0:30:78.18:0,78,2646	0/0:34,0:34:93.31:0,93,3710	1/1:10,15:27:72.25:4898,72,0	1/1:28,11:42:99:6141,108,0	1/1:38,1:43:99:7258,126,0	0/0:48,0:48:99:0,141,5668	1/1:24,8:37:99:5647,102,0	1/1:10,12:24:64.46:4068,64,0	0/0:26,0:26:69.21:0,69,2455	1/1:13,20:37:99:7063,102,0	0/1:10,19:32:51.59:5470,0,52	1/1:16,19:43:99:6107,102,0	0/0:41,0:41:99:0,111,4514	0/0:19,0:19:57.20:0,57,2483	1/1:10,5:19:36.06:2136,36,0	1/1:23,4:29:60.20:3102,60,0	1/1:17,14:39:99:6253,105,0	1/1:10,7:24:42.14:2603,42,0	1/1:18,11:32:90.22:4749,90,0	0/0:30,0:30:83.84:0,84,3593	0/0:28,0:28:78.25:0,78,2944	1/1:12,15:28:75.12:4697,75,0	0/1:32,1:33:99:126,0,3756	1/1:25,14:42:99:6969,111,0	0/0:8,0:8:24.08:0,24,978
chr10	36749666	.	T	TGAGA	2288.15	PASS	AB=0.931;AC=49;AF=0.942;AN=52;BaseQRankSum=-0.126;DP=576;FS=3.452;HRun=0;HaplotypeScore=122.0379;InbreedingCoeff=0.1985;MQ=66.79;MQ0=11;MQRankSum=0.226;QD=4.44;ReadPosRankSum=-0.377;VQSLOD=2.2467;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:25:8.62:92,9,0	1/1:11,0:11:0.89:2,1,0	./.	0/1:63,0:25:0:0,0,0	1/1:27,0:27:14.99:217,15,0	1/1:18,0:18:2.92:28,3,0	0/1:23,0:23:0:0,0,0	1/1:28,0:27:1.25:3,1,0	1/1:24,0:24:12.51:201,13,0	1/1:21,0:21:15.10:178,15,0	1/1:8,0:7:3:29,3,0	0/1:14,0:19:6.44:6,0,22	1/1:16,0:16:6.88:63,7,0	1/1:14,0:14:12.04:205,12,0	1/1:21,0:21:3.01:39,3,0	1/1:12,0:11:6.02:82,6,0	1/1:21,0:21:17.95:199,18,0	1/1:15,0:13:5.60:40,6,0	1/1:14,0:14:9.50:121,9,0	1/1:17,0:17:3.01:39,3,0	1/1:18,0:18:3.01:39,3,0	1/1:16,0:16:2.96:25,3,0	./.	1/1:10,5:15:3.01:70,3,0	1/1:17,0:17:12.04:177,12,0	1/1:29,0:28:33.23:401,33,0	1/1:16,0:16:6.91:117,7,0	1/1:7,0:7:0.94:2,1,0
chr10	36749707	.	G	GAA	1386.14	PASS	AB=0.891;AC=9;AF=0.161;AN=56;BaseQRankSum=2.353;DP=708;FS=9.514;HRun=1;HaplotypeScore=92.6902;InbreedingCoeff=0.5288;MQ=49.34;MQ0=68;MQRankSum=1.521;QD=10.27;ReadPosRankSum=4.301;VQSLOD=0.0965;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:19:9.86:0,10,53	0/0:14,0:14:29.91:0,30,243	0/0:56,0:13:13.73:0,14,131	0/0:78,0:14:10.73:0,11,163	1/1:36,1:37:56.40:527,56,0	0/0:16,0:14:14.45:0,14,108	0/0:28,0:20:29.53:0,30,219	0/0:21,0:20:59.65:0,60,466	0/1:23,0:23:29.64:240,0,30	0/0:26,0:20:48.09:0,48,341	0/0:16,0:9:2.84:0,3,14	0/0:25,0:25:35.28:0,35,396	0/0:22,0:21:43.56:0,44,313	0/0:24,0:24:33.31:0,33,419	0/0:19,0:18:11.02:0,11,77	1/1:14,0:13:15.88:237,16,0	0/1:27,0:25:73.12:183,0,73	0/0:20,0:9:11.09:0,11,56	0/0:9,0:9:23.24:0,23,167	0/0:35,0:33:58.70:0,59,465	0/0:17,0:17:38.17:0,38,303	0/0:22,0:22:53.91:0,54,443	0/0:23,0:22:47.91:0,48,391	0/0:31,0:30:52.80:0,53,427	0/0:25,0:25:33.48:0,33,324	0/1:15,13:28:99:229,0,155	0/0:21,0:21:49.52:0,50,382	1/1:5,0:5:14.96:126,15,0
chr10	36750475	.	G	GGTCTTGC	40686.86	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-6.309;DP=550;FS=0.464;HRun=0;HaplotypeScore=123.2801;InbreedingCoeff=0.9825;MQ=77.89;MQ0=0;MQRankSum=-13.682;QD=89.23;ReadPosRankSum=-0.415;VQSLOD=5.3689;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,15:17:45.15:1716,45,0	1/1:7,3:13:27.09:984,27,0	0/0:15,0:15:36.10:0,36,816	0/0:26,0:26:66.57:0,67,1404	1/1:0,8:13:27.09:883,27,0	1/1:2,6:9:24.05:839,24,0	1/1:3,9:13:36.12:1360,36,0	1/1:22,17:45:99:4045,120,0	1/1:5,26:35:87.26:3358,87,0	1/1:7,11:18:48.12:1690,48,0	1/1:1,10:11:30.03:991,30,0	0/0:17,0:17:51.18:0,51,1290	1/1:6,22:31:78.21:2887,78,0	1/1:6,17:26:57.15:2154,57,0	1/1:1,6:7:18.06:715,18,0	1/1:3,22:29:75.26:2976,75,0	1/1:7,10:20:33.11:1314,33,0	1/1:2,3:7:15.05:583,15,0	1/1:5,11:18:51.14:1749,51,0	1/1:8,13:22:57.11:1798,57,0	1/1:13,9:24:42.10:1441,42,0	1/1:6,13:23:60.12:2006,60,0	0/0:8,0:8:15.05:0,15,390	0/0:28,0:28:78.27:0,78,2009	1/1:8,12:19:51.17:1873,51,0	1/1:5,14:20:51.17:1957,51,0	1/1:11,16:29:75.26:2889,75,0	1/1:0,4:5:12.04:478,12,0
chr10	36750808	.	G	GCCC	8858.42	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-5.983;DP=584;FS=8.651;HRun=7;HaplotypeScore=100.7948;InbreedingCoeff=0.9497;MQ=89.78;MQ0=0;MQRankSum=-4.622;QD=34.33;ReadPosRankSum=1.679;VQSLOD=3.0556;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:10,20:34:38.11:708,38,0	0/0:12,0:12:24.05:0,24,326	0/0:25,0:25:63.17:0,63,835	0/0:24,0:25:52.65:0,53,649	1/1:2,10:12:21.07:410,21,0	1/1:4,15:22:36.01:541,36,0	1/1:9,14:28:53.15:946,53,0	0/0:19,0:19:48.14:0,48,652	1/1:2,9:16:29.75:504,30,0	1/1:3,10:13:27.09:542,27,0	1/1:6,0:6:3.01:49,3,0	0/0:25,0:25:69.21:0,69,938	0/0:21,0:21:60.14:0,60,767	0/0:33,0:33:90.23:0,90,1163	1/1:4,22:27:54.12:1038,54,0	1/1:3,22:27:69.15:1310,69,0	1/1:5,28:33:60.21:1244,60,0	1/1:2,24:27:60.21:1244,60,0	0/0:22,0:22:54.10:0,54,701	0/0:15,0:15:42.12:0,42,557	0/0:34,0:34:81.15:0,81,1064	0/0:19,0:19:41.95:0,42,572	0/0:17,0:17:45.14:0,45,610	0/0:17,0:17:48.13:0,48,633	0/0:18,0:18:51.17:0,51,693	1/1:3,6:11:18.03:260,18,0	0/0:24,0:24:72.20:0,72,960	1/1:1,1:2:3.01:62,3,0
chr10	36753163	.	CTAA	C	6456.15	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=19.629;DP=669;FS=0.987;HRun=0;HaplotypeScore=164.2484;InbreedingCoeff=0.9964;MQ=71.60;MQ0=0;MQRankSum=-15.163;QD=24.93;ReadPosRankSum=2.043;VQSLOD=5.0850;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,9:19:50.95:400,51,0	0/0:11,0:11:33.03:0,33,515	0/0:22,0:21:29.69:0,30,601	0/0:30,0:30:84.07:0,84,1427	1/1:6,13:19:34.21:370,34,0	1/1:10,16:26:51.12:574,51,0	1/1:11,9:20:48.22:428,48,0	0/0:35,0:35:87.20:0,87,1591	1/1:5,11:16:45.08:484,45,0	1/1:12,12:24:63.91:674,64,0	1/1:5,12:17:36.10:410,36,0	0/0:20,0:20:57.17:0,57,1182	0/0:22,0:22:63.18:0,63,1236	0/0:30,0:30:87.22:0,87,1795	1/1:9,22:31:84:886,84,0	1/1:13,14:27:69.61:710,70,0	1/1:8,8:16:41.72:365,42,0	1/1:5,7:12:20.60:211,21,0	0/0:16,0:16:39.09:0,39,662	0/0:34,0:34:99:0,99,1956	0/0:43,0:43:99:0,117,2320	0/0:28,0:28:78.15:0,78,1370	0/0:18,0:18:54.14:0,54,1022	0/0:42,0:42:99:0,108,2204	0/0:25,0:25:75.23:0,75,1521	1/1:8,18:26:74.03:792,74,0	0/0:34,0:34:90.21:0,90,1683	1/1:2,4:6:13.91:153,14,0
chr10	36753167	.	TAATAACAAC	T	13286.52	PASS	AB=1.000;AC=25;AF=0.446;AN=56;BaseQRankSum=19.367;DP=667;FS=0.000;HRun=0;HaplotypeScore=221.8167;InbreedingCoeff=0.9255;MQ=69.71;MQ0=0;MQRankSum=-14.944;QD=50.52;ReadPosRankSum=1.353;VQSLOD=4.2711;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:21,0:21:13.84:586,0,14	0/0:12,0:12:36.06:0,36,1159	0/0:23,0:22:60.13:0,60,1566	0/0:31,0:31:90.14:0,90,2920	1/1:23,0:23:41.86:914,42,0	1/1:16,8:24:51.18:1434,51,0	1/1:18,0:18:46.09:792,46,0	0/0:30,0:30:90.30:0,90,3233	1/1:15,0:15:32.57:957,33,0	1/1:25,0:25:37.62:1155,38,0	1/1:20,0:20:39.05:988,39,0	0/0:20,0:20:57.17:0,57,2383	0/0:22,0:22:66.21:0,66,2658	0/0:31,0:31:90.24:0,90,3948	1/1:28,0:28:84.08:2009,84,0	1/1:27,0:27:64.84:1402,65,0	1/1:17,0:17:34.04:648,34,0	1/1:11,0:11:14.08:372,14,0	0/0:13,0:13:39.11:0,39,1324	0/0:35,0:35:99:0,102,4163	0/0:42,0:42:99:0,117,5140	0/0:28,0:28:81.24:0,81,3173	0/0:18,0:18:54.14:0,54,2156	0/0:41,0:41:99:0,114,4978	0/0:26,0:26:78.25:0,78,3405	1/1:28,0:28:67.47:1680,67,0	0/0:32,0:32:90.23:0,90,3499	1/1:6,0:6:15:348,15,0
chr10	36753181	.	ACAACAG	A	10540.30	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=18.740;DP=686;FS=2.085;HRun=0;HaplotypeScore=195.6066;InbreedingCoeff=0.9973;MQ=61.24;MQ0=0;MQRankSum=-13.633;QD=38.19;ReadPosRankSum=-1.228;VQSLOD=4.3188;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,9:22:39.77:622,40,0	0/0:9,0:9:27.08:0,27,809	0/0:23,0:21:26.79:0,27,1050	0/0:25,0:25:52.32:0,52,1399	1/1:2,23:25:56.85:785,57,0	1/1:11,16:27:60.10:988,60,0	1/1:7,9:16:44.93:641,45,0	0/0:38,0:38:99:0,99,2468	1/1:8,11:19:51.15:886,51,0	1/1:3,22:25:63.09:943,63,0	1/1:1,18:19:36.12:657,36,0	0/0:24,0:24:69.18:0,69,1896	0/0:23,0:23:63.13:0,63,1669	0/0:29,0:29:84.23:0,84,2617	1/1:5,22:27:81.19:1379,81,0	1/1:10,14:24:65.94:1020,66,0	1/1:8,8:16:35.66:453,36,0	1/1:6,7:13:26.85:343,27,0	0/0:15,0:15:42.09:0,42,920	0/0:35,0:35:99:0,99,2934	0/0:41,0:41:99:0,117,3712	0/0:29,0:29:84.20:0,84,2327	0/0:24,0:24:71.84:0,72,1705	0/0:38,0:38:99:0,111,3252	0/0:25,0:25:72.18:0,72,2313	1/1:1,36:37:99:1570,108,0	0/0:32,0:32:84.20:0,84,2577	1/1:2,4:6:15.02:253,15,0
chr10	36759331	.	AG	A	4780.84	PASS	AB=0.957;AC=37;AF=0.661;AN=56;BaseQRankSum=-6.370;DP=514;FS=34.964;HRun=11;HaplotypeScore=76.0755;InbreedingCoeff=0.7548;MQ=69.99;MQ0=0;MQRankSum=-2.455;QD=12.96;ReadPosRankSum=5.042;VQSLOD=2.3951;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,17:23:41.80:330,42,0	1/1:1,8:9:0.34:127,0,0	0/1:24,1:23:2.65:3,0,290	0/1:13,0:13:2.75:3,0,129	0/0:10,0:18:20.08:0,20,121	1/1:6,9:15:20.95:172,21,0	1/1:2,15:18:37.95:301,38,0	1/1:11,12:23:21.29:298,21,0	0/0:10,0:22:37.38:0,37,213	1/1:9,13:22:32.93:270,33,0	1/1:3,11:14:17.98:148,18,0	0/0:22,0:22:42.02:0,42,420	1/1:3,17:20:44.93:369,45,0	1/1:7,16:23:44.84:362,45,0	1/1:5,22:27:53.86:436,54,0	0/0:9,0:28:34.36:0,34,183	0/0:9,0:14:29.02:0,29,178	1/1:1,12:13:29.92:240,30,0	1/1:6,12:18:38.94:320,39,0	1/1:9,10:19:23.87:185,24,0	1/1:5,17:24:42.97:325,43,0	1/1:3,15:18:41.88:338,42,0	0/1:9,1:10:12.64:13,0,74	0/0:13,0:13:18.33:0,18,180	1/1:5,7:12:17.97:148,18,0	0/0:16,0:21:32.12:0,32,220	1/1:1,21:22:47.94:394,48,0	0/0:3,0:7:2.84:0,3,14
chr10	36762362	.	C	CA	3501.90	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-7.945;DP=447;FS=8.381;HRun=0;HaplotypeScore=53.9701;InbreedingCoeff=0.9852;MQ=80.80;MQ0=0;MQRankSum=-1.381;QD=35.73;ReadPosRankSum=3.996;VQSLOD=2.8889;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:54.14:0,54,693	0/0:8,0:8:21.05:0,21,260	0/0:16,0:15:31.86:0,32,424	0/0:20,0:20:47.43:0,47,592	1/1:1,12:13:36.05:479,36,0	0/0:19,0:19:54:0,54,685	0/0:24,0:24:72.16:0,72,917	0/0:13,0:13:24.67:0,25,244	1/1:1,13:14:42.13:582,42,0	0/0:10,0:10:27.02:0,27,339	0/0:21,0:21:60.18:0,60,812	0/0:25,0:25:75.06:0,75,987	0/0:13,0:13:39.13:0,39,541	0/0:25,0:25:72.19:0,72,938	0/0:16,0:16:45.11:0,45,565	1/1:0,17:17:27.09:385,27,0	1/1:0,25:25:69.18:956,69,0	0/0:14,0:14:33.96:0,34,451	0/0:7,0:7:21.03:0,21,229	0/0:12,0:12:36.10:0,36,467	0/0:25,0:25:69.17:0,69,907	0/0:5,0:5:9.89:0,10,95	0/0:17,0:17:45.12:0,45,588	0/0:12,0:12:36.05:0,36,478	0/0:7,0:7:21.07:0,21,289	1/1:0,19:20:60.17:806,60,0	0/0:21,0:20:60.19:0,60,815	1/1:1,8:9:18.17:294,18,0
chr10	36764217	.	ATT	A	5201.23	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=4.696;DP=466;FS=0.000;HRun=15;HaplotypeScore=72.1089;InbreedingCoeff=0.8812;MQ=65.23;MQ0=3;MQRankSum=-1.239;QD=13.54;ReadPosRankSum=6.237;VQSLOD=3.8023;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,11:18:23.33:192,23,0	1/1:1,5:6:11.99:106,12,0	0/0:16,0:8:6.06:0,6,49	0/0:13,0:8:4.16:0,4,116	1/1:2,0:12:20.96:87,21,0	1/1:2,11:13:32.93:291,33,0	1/1:4,11:17:26.42:208,26,0	1/1:14,13:27:41.48:355,41,0	1/1:3,0:17:32.89:141,33,0	1/1:7,13:21:32.44:276,32,0	1/1:6,8:14:17.02:201,17,0	0/0:19,0:21:53.99:0,54,571	1/1:4,14:18:32.95:285,33,0	1/1:2,10:14:29.52:249,30,0	1/1:4,9:14:3.10:149,3,0	1/1:2,0:20:32.91:141,33,0	1/1:2,0:13:27.40:118,27,0	1/1:5,7:13:17.60:144,18,0	1/1:6,10:18:35.40:287,35,0	1/1:6,17:27:37.81:390,38,0	1/1:2,9:11:26.97:238,27,0	1/1:5,7:12:23.90:211,24,0	0/0:17,0:21:40.56:0,41,437	0/0:9,0:9:21.05:0,21,265	1/1:4,15:20:38.34:313,38,0	1/1:2,0:15:32.88:141,33,0	1/1:10,24:35:71.64:619,72,0	1/1:0,0:6:13.72:59,14,0
chr10	36764813	.	T	TTCTCTCTC	10339.26	PASS	AB=1.000;AC=43;AF=0.796;AN=54;BaseQRankSum=1.359;DP=579;FS=22.288;HRun=0;HaplotypeScore=174.9718;InbreedingCoeff=0.5686;MQ=54.97;MQ0=6;MQRankSum=-6.194;QD=21.14;ReadPosRankSum=-2.121;VQSLOD=2.7611;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:15,0:14:15.55:61,0,16	1/1:4,8:12:18.01:638,18,0	0/0:23,0:15:15.51:0,16,262	0/1:42,0:21:18.05:18,0,200	1/1:29,0:28:6.02:91,6,0	1/1:17,0:15:12.02:282,12,0	1/1:21,0:24:5.05:110,5,0	1/1:33,0:30:6.02:164,6,0	1/1:8,0:15:6.02:209,6,0	1/1:22,0:26:35.51:1073,36,0	1/1:20,0:20:5.77:151,6,0	0/0:20,0:21:39.13:0,39,970	1/1:17,2:20:21:734,21,0	1/1:9,11:21:18.06:744,18,0	1/1:23,0:28:20.56:628,21,0	1/1:21,0:22:5.88:114,6,0	1/1:9,0:13:5.92:151,6,0	./.	1/1:17,5:20:30.09:929,30,0	1/1:14,4:20:15:545,15,0	0/1:3,0:3:0:0,0,0	1/1:12,0:14:9.03:287,9,0	0/0:17,0:20:39.61:0,40,949	0/0:17,0:17:33.11:0,33,810	1/1:19,3:22:27.08:755,27,0	1/1:28,0:34:45.14:1465,45,0	1/1:14,10:26:30.10:1051,30,0	1/1:9,0:9:6.02:140,6,0
chr10	36765012	.	CTA	C	3625.49	PASS	AB=0.833;AC=45;AF=0.804;AN=56;BaseQRankSum=-2.248;DP=294;FS=10.178;HRun=0;HaplotypeScore=43.3826;InbreedingCoeff=0.5717;MQ=78.23;MQ0=6;MQRankSum=-4.152;QD=17.86;ReadPosRankSum=0.598;VQSLOD=1.9397;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:16:2.97:20,3,0	1/1:2,0:3:9.02:102,9,0	0/0:45,0:20:31.27:0,31,338	0/0:22,0:16:3.30:0,3,168	1/1:5,0:9:14.95:138,15,0	1/1:11,1:15:41.86:383,42,0	1/1:9,0:9:2.94:18,3,0	1/1:1,18:19:53.81:484,54,0	1/1:4,0:6:14.85:116,15,0	1/1:11,1:12:30:287,30,0	1/1:1,0:1:2.98:21,3,0	0/0:15,0:14:2.21:0,2,189	1/1:6,0:6:12.87:117,13,0	1/1:4,0:4:10.19:71,10,0	1/1:10,0:10:26.79:194,27,0	1/1:6,0:7:14.91:118,15,0	1/1:11,0:11:23.66:177,24,0	1/1:0,10:11:9.03:121,9,0	1/1:10,0:11:26.90:244,27,0	1/1:1,6:8:11.92:97,12,0	1/1:5,0:5:9:79,9,0	1/1:4,0:4:9.01:102,9,0	0/0:2,0:2:2.90:0,3,16	0/0:7,0:7:4.27:0,4,104	1/1:4,0:4:11.98:118,12,0	1/1:0,0:12:29.83:251,30,0	1/1:13,0:13:34.88:283,35,0	0/1:4,0:5:4.73:85,0,5
chr10	36765013	.	TA	T	3421.04	PASS	AB=1.000;AC=48;AF=0.857;AN=56;BaseQRankSum=-2.572;DP=297;FS=15.548;HRun=1;HaplotypeScore=42.4475;InbreedingCoeff=0.4568;MQ=80.86;MQ0=7;MQRankSum=-4.262;QD=15.27;ReadPosRankSum=0.392;VQSLOD=1.7366;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,15:15:2.97:20,3,0	1/1:3,0:3:9.02:92,9,0	0/0:47,0:21:32.33:0,32,338	0/0:23,0:17:15.93:0,16,194	1/1:8,0:8:14.96:125,15,0	1/1:16,0:16:41.82:337,42,0	1/1:0,8:8:3.01:38,3,0	1/1:18,1:19:54.67:433,55,0	1/1:6,0:6:14.84:109,15,0	1/1:13,0:12:30.86:268,31,0	1/1:2,0:2:2.98:21,3,0	0/1:16,0:15:5.30:5,0,155	1/1:5,0:5:14.94:121,15,0	1/1:4,0:4:10.19:71,10,0	1/1:10,0:10:26.77:187,27,0	1/1:5,0:5:14.90:112,15,0	1/1:10,0:10:24.13:177,24,0	1/1:11,0:11:9.01:87,9,0	1/1:9,1:10:29.12:231,29,0	1/1:8,0:8:11.90:85,12,0	1/1:5,0:5:9:79,9,0	1/1:4,0:4:9.48:82,9,0	0/0:3,0:3:0.56:0,1,2	0/1:9,0:9:32.71:33,0,80	1/1:3,1:4:11.98:104,12,0	1/1:12,0:12:29.81:231,30,0	1/1:15,1:15:37.87:294,38,0	1/1:5,0:5:2.38:80,2,0
chr10	36765131	.	TTTTCAA	T	4140.98	PASS	AB=1.000;AC=45;AF=0.804;AN=56;BaseQRankSum=-5.564;DP=379;FS=8.042;HRun=0;HaplotypeScore=48.7085;InbreedingCoeff=0.6371;MQ=53.36;MQ0=34;MQRankSum=-4.770;QD=18.57;ReadPosRankSum=-1.438;VQSLOD=1.0213;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:18:8.45:81,8,0	1/1:5,0:5:6.02:98,6,0	0/0:66,0:12:29.94:0,30,366	0/0:64,0:16:30.07:0,30,362	1/1:7,0:7:9.03:143,9,0	1/1:17,0:17:4.57:96,5,0	1/1:11,0:11:7.84:102,8,0	1/1:26,0:25:67.04:832,67,0	1/1:7,0:7:15.03:188,15,0	1/1:8,0:8:21.07:331,21,0	1/1:6,0:6:5.96:97,6,0	0/0:7,0:7:15.05:0,15,332	1/1:5,0:4:4.57:54,5,0	1/1:7,0:7:6.02:99,6,0	1/1:10,0:10:12.04:180,12,0	1/1:2,7:9:6.02:98,6,0	1/1:11,0:11:3.01:48,3,0	1/1:4,0:4:7.27:101,7,0	0/1:13,0:12:0.11:421,0,0	1/1:10,0:10:12.04:188,12,0	1/1:4,0:2:3.01:50,3,0	1/1:5,0:5:13.16:118,13,0	0/0:9,0:8:9.69:0,10,285	0/0:10,0:8:14.94:0,15,359	1/1:10,0:9:9.03:143,9,0	1/1:12,0:10:26.67:373,27,0	1/1:9,1:10:11.12:194,11,0	1/1:8,0:6:8.70:110,9,0
chr10	36765132	.	TTTCAA	T	4353.41	PASS	AB=1.000;AC=45;AF=0.804;AN=56;BaseQRankSum=-6.051;DP=373;FS=9.805;HRun=0;HaplotypeScore=43.5765;InbreedingCoeff=0.6184;MQ=53.40;MQ0=34;MQRankSum=-4.339;QD=19.97;ReadPosRankSum=-1.716;VQSLOD=2.3953;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:19:8.45:81,8,0	1/1:4,0:4:6.02:98,6,0	0/0:66,0:12:30.41:0,30,359	0/0:64,0:16:30.63:0,31,349	1/1:7,0:7:9.03:145,9,0	1/1:17,0:17:4.90:96,5,0	1/1:11,0:11:7.84:98,8,0	1/1:26,0:25:67.89:953,68,0	1/1:7,0:7:15.04:215,15,0	1/1:8,0:8:21.07:337,21,0	1/1:6,0:6:5.96:97,6,0	0/0:7,0:7:15.05:0,15,301	1/1:4,0:3:5.05:56,5,0	1/1:7,0:7:6.02:99,6,0	1/1:10,0:10:12.04:185,12,0	1/1:8,0:8:6.02:84,6,0	1/1:1,10:11:3.01:56,3,0	1/1:4,0:4:6.91:101,7,0	0/1:12,0:11:5.47:427,0,5	1/1:8,0:8:12.04:192,12,0	1/1:4,0:2:3.01:50,3,0	1/1:5,0:5:13.16:124,13,0	0/0:9,0:8:9.84:0,10,252	0/0:9,0:7:15.05:0,15,325	1/1:10,0:9:9.03:145,9,0	1/1:12,0:10:26.98:398,27,0	1/1:10,0:10:11.48:207,11,0	1/1:8,0:6:8.70:111,9,0
chr10	36765134	.	TCAA	T	4606.76	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-6.239;DP=361;FS=9.723;HRun=0;HaplotypeScore=34.3684;InbreedingCoeff=0.6499;MQ=53.70;MQ0=34;MQRankSum=-4.462;QD=21.94;ReadPosRankSum=-1.992;VQSLOD=2.1938;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,17:18:8.45:81,8,0	1/1:0,4:4:6.02:98,6,0	0/0:64,1:12:30.28:0,30,329	0/0:63,0:15:26.76:0,27,319	1/1:1,6:7:9.03:148,9,0	1/1:0,17:17:5.15:97,5,0	1/1:0,11:11:7.84:100,8,0	1/1:3,23:25:67.94:1102,68,0	1/1:0,6:6:15.05:250,15,0	1/1:1,7:8:21.07:339,21,0	1/1:1,4:5:5.96:82,6,0	0/0:7,0:7:15.05:0,15,267	1/1:1,1:3:5.05:51,5,0	1/1:0,5:5:6.02:99,6,0	1/1:1,9:10:12.04:190,12,0	1/1:7,1:8:6.02:73,6,0	1/1:10,0:10:3.01:38,3,0	1/1:1,3:4:6.91:97,7,0	1/1:2,10:11:1.44:470,1,0	1/1:0,7:8:12.04:198,12,0	1/1:3,1:2:3.01:50,3,0	1/1:2,2:4:10.79:123,11,0	0/0:7,0:6:12.04:0,12,197	0/0:9,0:7:15.05:0,15,261	1/1:1,9:9:9.03:145,9,0	1/1:4,7:9:27.07:422,27,0	1/1:7,3:10:11.56:238,12,0	1/1:7,1:6:8.95:116,9,0
chr10	36765226	.	AC	A	418.81	PASS	AB=0.924;AC=14;AF=0.280;AN=50;BaseQRankSum=0.348;DP=190;FS=16.642;HRun=11;HaplotypeScore=24.4351;InbreedingCoeff=0.3187;MQ=71.08;MQ0=22;MQRankSum=-0.388;QD=6.35;ReadPosRankSum=4.685;VQSLOD=-0.0265;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:10,1:11:12.14:12,0,77	./.	0/0:21,0:12:22.75:0,23,126	0/0:19,0:4:6.89:0,7,58	0/1:5,1:6:33.89:34,0,41	0/0:10,0:10:14.91:0,15,143	0/0:13,0:12:9.01:0,9,90	0/1:11,1:11:9.60:10,0,113	1/1:1,2:3:5.99:49,6,0	0/0:7,0:6:3.01:0,3,32	0/0:4,0:4:6:0,6,55	0/0:4,0:4:12.03:0,12,127	0/0:4,0:3:2.97:0,3,20	0/0:2,0:1:2.97:0,3,20	0/1:7,0:6:12.17:12,0,69	1/1:1,1:3:5.03:31,5,0	1/1:0,7:7:8.99:74,9,0	./.	0/0:7,0:4:7.26:0,7,66	./.	0/0:2,0:2:0:0,0,0	0/0:3,0:3:6.02:0,6,64	0/0:4,0:4:2.96:0,3,19	0/0:6,0:5:2.84:0,3,14	0/0:3,0:3:6.02:0,6,64	1/1:2,4:6:14.98:123,15,0	0/0:5,0:3:5.96:0,6,45	1/1:4,6:10:29:226,29,0
chr10	36765272	.	T	TTC	214.34	PASS	AB=1.000;AC=22;AF=0.647;AN=34;BaseQRankSum=-0.595;DP=191;FS=2.884;HRun=0;HaplotypeScore=43.4075;InbreedingCoeff=0.3359;MQ=47.83;MQ0=12;MQRankSum=-0.735;QD=2.19;ReadPosRankSum=-0.665;VQSLOD=1.1480;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:8,0:8:3.43:31,3,0	./.	./.	./.	./.	1/1:4,0:4:2.90:16,3,0	./.	0/1:13,0:12:0:0,0,0	./.	./.	./.	./.	1/1:5,3:7:3.01:37,3,0	1/1:7,1:8:6.02:84,6,0	0/0:3,0:5:5.99:0,6,50	0/1:5,0:5:0:0,0,0	1/1:7,0:7:1.25:3,1,0	0/0:3,0:2:2.98:0,3,22	1/1:7,0:7:4.40:18,4,0	0/1:7,0:7:0:0,0,0	0/1:8,0:8:1.23:17,0,1	1/1:3,0:3:2.99:24,3,0	0/0:3,0:2:2.98:0,3,22	0/0:5,0:4:2.34:0,2,24	1/1:9,0:9:2.80:13,3,0	./.	1/1:11,0:8:6.90:72,7,0	./.
chr10	36765323	.	TCTCCCTCC	T	1155.57	PASS	AB=1.000;AC=15;AF=0.341;AN=44;BaseQRankSum=-1.228;DP=192;FS=2.241;HRun=0;HaplotypeScore=50.0794;InbreedingCoeff=0.6114;MQ=44.03;MQ0=41;MQRankSum=-2.000;QD=17.78;ReadPosRankSum=1.489;VQSLOD=2.1085;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:8:17.81:0,18,241	./.	0/0:10,0:3:6.02:0,6,193	0/0:19,0:7:9.32:0,9,484	./.	0/0:4,0:3:6.02:0,6,119	0/0:8,0:5:6.02:0,6,101	1/1:5,7:7:17.97:290,18,0	./.	0/0:8,0:8:8.96:0,9,158	0/0:10,0:10:6.03:0,6,186	0/0:8,0:5:12.01:0,12,282	0/0:7,0:5:0.89:0,1,2	1/1:5,3:8:5.99:118,6,0	0/0:11,0:11:9.07:0,9,202	0/0:2,0:2:3.01:0,3,59	0/1:6,0:5:0.56:1,0,1	0/0:4,0:2:3.01:0,3,63	1/1:3,4:5:11.99:200,12,0	1/1:1,2:3:6.91:81,7,0	1/1:12,0:11:13.72:346,14,0	1/1:2,1:3:3.01:40,3,0	./.	0/0:7,0:3:4.51:0,5,23	./.	0/0:2,0:2:3.01:0,3,54	1/1:9,5:12:9.03:229,9,0	./.
chr10	36770461	.	T	TTA	2675.43	PASS	AB=0.563;AC=19;AF=0.339;AN=56;BaseQRankSum=-10.248;DP=306;FS=13.526;HRun=0;HaplotypeScore=48.2119;InbreedingCoeff=0.7179;MQ=69.25;MQ0=2;MQRankSum=2.034;QD=28.16;ReadPosRankSum=-2.157;VQSLOD=2.7253;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:44.16:0,44,485	1/1:1,4:6:9.03:149,9,0	0/0:7,0:4:2.80:0,3,13	0/0:22,0:11:5.12:0,5,23	0/0:13,0:13:27.08:0,27,333	0/0:10,0:10:24.07:0,24,289	0/0:4,0:4:9.03:0,9,113	1/1:10,25:36:43.89:1179,44,0	0/0:7,0:7:21.07:0,21,262	0/0:7,0:7:9.03:0,9,113	0/0:6,0:6:15.05:0,15,187	0/0:9,0:9:24.07:0,24,288	1/1:0,6:6:15.05:248,15,0	1/1:2,4:6:9.03:149,9,0	0/0:5,0:5:9.03:0,9,112	0/0:10,0:10:15.05:0,15,187	0/0:35,0:34:69.11:0,69,808	0/0:15,0:15:36.11:0,36,449	1/1:1,6:7:18.04:271,18,0	1/1:4,1:5:3.01:50,3,0	1/1:0,1:1:3.01:50,3,0	1/1:3,0:3:3.01:47,3,0	0/0:7,0:7:9.03:0,9,113	0/0:4,0:4:6.02:0,6,75	1/1:2,14:16:30.10:495,30,0	0/0:11,0:11:24.08:0,24,298	0/1:2,6:9:19.47:229,0,19	0/0:14,0:14:33.10:0,33,411
chr10	36770477	.	ATG	A	2405.85	PASS	AB=0.976;AC=13;AF=0.232;AN=56;BaseQRankSum=2.309;DP=337;FS=0.000;HRun=0;HaplotypeScore=55.5817;InbreedingCoeff=0.7925;MQ=71.67;MQ0=5;MQRankSum=0.279;QD=18.65;ReadPosRankSum=2.696;VQSLOD=3.5324;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:42.04:0,42,662	0/0:6,0:6:11.98:0,12,207	0/0:13,0:8:16.98:0,17,187	0/1:40,0:16:7.96:8,0,69	1/1:0,13:13:30.10:399,30,0	0/0:11,0:11:30.09:0,30,491	0/0:3,0:3:9.03:0,9,156	0/0:41,0:41:99:0,117,1952	1/1:1,7:8:21.07:279,21,0	0/0:7,0:7:21.06:0,21,331	0/0:9,0:9:27.07:0,27,414	0/0:9,0:9:24.08:0,24,415	0/0:6,0:6:15.05:0,15,259	0/0:7,0:7:18.06:0,18,303	0/0:5,0:5:15.05:0,15,236	1/1:0,9:9:27.09:359,27,0	1/1:4,27:30:63.21:838,63,0	0/0:18,0:18:47.61:0,48,766	0/0:11,0:10:30.05:0,30,477	0/0:1,0:1:3.01:0,3,52	0/0:4,0:4:12.04:0,12,207	0/0:2,0:2:6.02:0,6,102	0/0:3,0:3:9.03:0,9,156	0/0:3,0:3:3.01:0,3,52	0/0:15,0:15:33.11:0,33,570	1/1:0,11:11:30.03:348,30,0	0/0:12,0:12:30.10:0,30,518	1/1:6,10:15:27.09:359,27,0
chr10	36771313	.	C	CTTTGTTTTGT	19430.25	PASS	AB=0.679;AC=42;AF=0.778;AN=54;BaseQRankSum=-5.407;DP=782;FS=1.165;HRun=0;HaplotypeScore=211.5433;InbreedingCoeff=0.6562;MQ=60.67;MQ0=12;MQRankSum=-9.704;QD=31.91;ReadPosRankSum=-2.820;VQSLOD=4.2497;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:24,7:34:12.04:551,12,0	1/1:10,4:14:15.05:734,15,0	0/0:43,0:26:15.04:0,15,270	0/0:43,0:24:1.28:0,1,71	1/1:31,8:41:27.09:1076,27,0	1/1:21,7:29:18.06:885,18,0	1/1:13,0:13:12.04:357,12,0	1/1:40,0:40:33.11:743,33,0	1/1:6,5:14:15.05:649,15,0	1/1:16,3:19:12.03:454,12,0	1/1:10,13:25:30.10:1248,30,0	0/0:30,0:30:57.18:0,57,1498	1/1:15,10:26:15.05:651,15,0	1/1:17,20:41:42.14:1987,42,0	1/1:24,14:42:33.11:1448,33,0	1/1:15,9:25:12.04:595,12,0	1/1:19,4:24:1.84:658,2,0	0/1:16,9:28:26.58:857,0,27	1/1:23,4:28:21.07:784,21,0	1/1:24,13:37:36.12:1387,36,0	./.	1/1:21,7:30:18.06:681,18,0	0/0:22,0:22:42.14:0,42,1075	0/0:29,0:29:63.22:0,63,1783	0/1:12,13:25:4.11:564,0,4	1/1:14,15:32:54.16:1950,54,0	1/1:16,13:33:24.08:1085,24,0	1/1:6,0:6:3.01:87,3,0
chr10	36772714	.	A	ATGCAT	21782.07	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-7.324;DP=907;FS=0.000;HRun=0;HaplotypeScore=78.2467;InbreedingCoeff=0.9759;MQ=41.26;MQ0=139;MQRankSum=-5.720;QD=29.80;ReadPosRankSum=-0.748;VQSLOD=3.9344;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,38:24:60.21:1812,60,0	1/1:2,10:9:15.05:445,15,0	0/0:35,0:32:96.29:0,96,1916	0/0:26,0:22:63.16:0,63,1215	1/1:9,22:12:21.07:522,21,0	1/1:15,32:24:54.19:1626,54,0	1/1:16,16:16:17.98:326,18,0	1/1:19,20:11:18.02:320,18,0	1/1:8,38:17:33.11:983,33,0	1/1:8,24:8:24.08:729,24,0	1/1:6,12:11:24.05:649,24,0	0/0:39,9:37:96.20:0,96,1976	1/1:10,32:14:36.12:1096,36,0	1/1:10,37:14:30.10:926,30,0	1/1:12,39:29:60.21:1852,60,0	1/1:8,36:17:39.01:1192,39,0	1/1:7,19:22:45.15:1324,45,0	1/1:3,12:11:30.10:930,30,0	1/1:14,15:6:12.04:358,12,0	1/1:4,32:19:45.15:1353,45,0	1/1:8,12:20:33.09:890,33,0	1/1:5,19:15:36.12:1052,36,0	0/0:27,1:23:63.22:0,63,1320	0/0:37,2:35:99:0,99,2038	1/1:5,14:15:36.12:1089,36,0	1/1:3,22:13:39.12:1122,39,0	1/1:2,19:13:27.09:814,27,0	1/1:0,5:4:12.04:371,12,0
chr10	36773973	.	GGGA	G	3411.08	PASS	AB=1.000;AC=37;AF=0.712;AN=52;BaseQRankSum=3.552;DP=357;FS=4.162;HRun=0;HaplotypeScore=75.6841;InbreedingCoeff=0.6541;MQ=92.63;MQ0=0;MQRankSum=-4.276;QD=14.58;ReadPosRankSum=1.169;VQSLOD=2.8057;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,3:16:29.95:240,30,0	1/1:6,0:6:4.33:37,4,0	0/0:24,0:23:45.43:0,45,761	0/0:28,0:26:6.87:0,7,513	1/1:25,0:25:50.86:391,51,0	1/1:15,0:15:9.12:92,9,0	1/1:17,1:18:2.43:16,2,0	1/1:5,0:5:0.26:1,0,0	1/1:14,0:14:29.99:280,30,0	1/1:3,0:3:3.47:29,3,0	1/1:4,0:4:11.97:95,12,0	0/0:25,0:25:43.16:0,43,1112	./.	1/1:11,0:11:7.99:51,8,0	1/1:11,0:11:5.94:77,6,0	1/1:19,0:19:51.03:489,51,0	1/1:20,0:20:41.93:374,42,0	1/1:14,3:17:37.15:363,37,0	0/0:2,0:2:1.78:0,2,17	./.	1/1:8,0:8:5.88:51,6,0	0/0:4,0:4:0:0,0,0	0/0:18,0:18:42.08:0,42,761	0/0:21,0:21:54.14:0,54,1011	0/1:10,0:10:5.70:37,0,6	1/1:15,0:15:41.89:397,42,0	1/1:6,0:6:8.38:74,8,0	1/1:11,0:11:33.02:316,33,0
chr10	36773974	.	GGA	G	5114.83	PASS	AB=1.000;AC=42;AF=0.808;AN=52;BaseQRankSum=2.982;DP=345;FS=3.366;HRun=0;HaplotypeScore=64.4001;InbreedingCoeff=0.6605;MQ=92.61;MQ0=0;MQRankSum=-3.321;QD=19.82;ReadPosRankSum=0.297;VQSLOD=4.6050;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,1:15:32.86:300,33,0	1/1:5,0:5:3.86:29,4,0	0/0:22,0:22:37.21:0,37,627	0/1:28,0:26:20.39:20,0,411	1/1:1,23:24:54.01:699,54,0	1/1:16,0:16:22.07:172,22,0	1/1:3,14:17:5.97:65,6,0	1/1:4,0:4:0.05:1,0,0	1/1:0,13:13:30.10:452,30,0	1/1:2,0:2:5.37:36,5,0	1/1:4,0:4:11.97:96,12,0	0/0:25,0:25:45.67:0,46,914	./.	1/1:10,0:10:8.53:71,9,0	1/1:2,9:11:10.49:77,10,0	1/1:0,19:19:51.13:743,51,0	1/1:1,19:20:41.77:630,42,0	1/1:15,1:16:46.17:402,46,0	1/1:3,0:3:6:53,6,0	./.	1/1:8,0:8:7.97:57,8,0	0/1:4,0:4:0.20:0,0,0	0/0:19,0:19:45.04:0,45,656	0/0:20,0:20:54.15:0,54,817	1/1:9,0:9:7.76:50,8,0	1/1:0,14:14:42.09:594,42,0	1/1:5,0:5:11.98:97,12,0	1/1:0,11:11:33.07:472,33,0
chr10	36773975	.	GA	G	3463.47	PASS	AB=1.000;AC=39;AF=0.750;AN=52;BaseQRankSum=3.676;DP=338;FS=0.532;HRun=1;HaplotypeScore=63.5140;InbreedingCoeff=0.7830;MQ=91.21;MQ0=0;MQRankSum=-4.131;QD=15.60;ReadPosRankSum=0.411;VQSLOD=3.3407;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:15:32.47:253,32,0	1/1:5,0:5:5.29:45,5,0	0/0:22,0:21:42.42:0,42,496	0/0:25,2:25:14.15:0,14,392	1/1:23,0:23:53.65:412,54,0	1/1:15,1:16:23.68:185,24,0	1/1:16,0:16:5.95:44,6,0	0/1:4,0:4:0.30:1,0,0	1/1:13,0:13:29.96:247,30,0	1/1:2,0:2:4.82:33,5,0	1/1:4,0:4:11.97:96,12,0	0/0:24,0:24:34.26:0,34,701	./.	1/1:10,0:10:10.49:75,10,0	1/1:9,2:11:10.47:71,10,0	1/1:19,0:19:50.91:415,51,0	1/1:19,0:19:41.93:343,42,0	1/1:15,1:16:46.41:365,46,0	1/1:3,0:3:6.47:54,6,0	./.	1/1:7,0:7:7.17:54,7,0	0/0:4,0:4:0:0,0,0	0/0:19,0:19:45.02:0,45,525	0/0:20,0:20:57.10:0,57,656	1/1:9,0:9:10.65:79,11,0	1/1:14,0:14:41.83:328,42,0	1/1:5,0:5:11.98:98,12,0	1/1:11,0:11:32.93:267,33,0
chr10	36775357	.	TA	T	3774.95	PASS	AB=0.830;AC=28;AF=0.500;AN=56;BaseQRankSum=11.634;DP=637;FS=0.000;HRun=12;HaplotypeScore=79.0536;InbreedingCoeff=0.6964;MQ=69.18;MQ0=1;MQRankSum=1.408;QD=10.12;ReadPosRankSum=5.363;VQSLOD=3.0635;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,27:33:32.31:434,32,0	0/0:8,1:9:3.83:0,4,220	0/1:18,0:17:16.77:17,0,164	0/1:14,1:15:17.47:17,0,51	1/1:3,0:27:39.66:122,40,0	1/1:6,25:31:74.70:580,75,0	1/1:2,20:22:50.78:395,51,0	0/1:24,3:28:15.78:16,0,381	1/1:2,0:14:22.40:65,22,0	1/1:7,20:27:53.74:418,54,0	1/1:3,16:19:44.78:348,45,0	0/0:20,2:22:7.63:0,8,441	0/0:19,2:21:27.70:0,28,447	0/0:23,0:24:50.94:0,51,501	1/1:3,33:37:91.68:702,92,0	1/1:3,0:24:38.70:112,39,0	1/1:4,0:17:22.40:65,22,0	0/1:7,19:26:4.13:338,0,4	0/0:16,1:18:12.58:0,13,278	0/0:31,2:34:17.46:0,17,518	0/0:15,0:15:39.05:0,39,382	0/0:15,2:17:15.84:0,16,342	0/0:27,0:27:67.32:0,67,647	0/0:25,0:25:69.13:0,69,696	0/0:21,1:23:24.67:0,25,406	1/1:4,0:24:34.81:106,35,0	0/0:26,1:28:33.67:0,34,498	1/1:0,0:8:14.26:41,14,0
chr10	36777726	.	G	GT	2436.58	PASS	AB=0.750;AC=20;AF=0.357;AN=56;BaseQRankSum=-9.761;DP=612;FS=1.916;HRun=13;HaplotypeScore=79.3282;InbreedingCoeff=0.7398;MQ=74.65;MQ0=0;MQRankSum=2.094;QD=9.86;ReadPosRankSum=-3.274;VQSLOD=2.4173;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:32:22.47:0,22,91	0/1:4,4:8:20.85:92,0,21	0/0:22,0:18:4.80:0,5,82	0/0:16,0:14:11.75:0,12,91	0/1:16,4:20:1.35:1,0,137	0/0:10,0:26:26.53:0,27,78	0/0:6,0:28:36.63:0,37,106	1/1:19,22:40:45.73:509,46,0	0/0:14,0:14:23.66:0,24,163	0/0:13,0:28:27.73:0,28,91	0/0:4,1:14:0.76:0,1,38	0/0:23,0:23:26.02:0,26,301	1/1:3,17:21:30.71:313,31,0	1/1:4,11:15:15:135,15,0	0/0:9,0:35:45.07:0,45,131	0/0:18,1:19:13.69:0,14,232	0/0:22,0:23:49.56:0,50,333	0/0:4,0:24:36.42:0,36,105	1/1:10,14:24:24.17:337,24,0	1/1:5,14:21:32.78:276,33,0	1/1:8,23:31:33.04:307,33,0	1/1:7,13:20:4.69:169,5,0	0/0:14,4:18:2.68:0,3,135	0/0:13,1:14:3.83:0,4,159	1/1:8,13:21:21.45:188,21,0	0/0:16,0:17:13.42:0,13,85	1/1:7,18:25:18.45:310,18,0	0/0:10,0:10:20.74:0,21,144
chr10	36779189	.	GT	G	12232.51	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=8.365;DP=643;FS=2.515;HRun=9;HaplotypeScore=100.3922;InbreedingCoeff=0.9979;MQ=76.67;MQ0=0;MQRankSum=-3.638;QD=23.17;ReadPosRankSum=3.093;VQSLOD=5.1004;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,30:36:78.03:714,78,0	1/1:3,6:9:21:189,21,0	0/0:27,1:26:21.81:0,22,449	0/0:24,0:21:37.86:0,38,443	1/1:2,22:24:63.02:576,63,0	1/1:4,17:21:51.02:467,51,0	1/1:3,10:13:33:298,33,0	1/1:8,28:36:90.02:818,90,0	1/1:2,22:25:62.07:555,62,0	1/1:3,22:25:66.01:598,66,0	1/1:0,31:30:87.04:795,87,0	0/0:16,0:16:42.12:0,42,485	1/1:1,26:27:69.04:631,69,0	1/1:3,18:21:57.01:517,57,0	1/1:1,20:21:54.03:494,54,0	1/1:1,19:20:51.03:467,51,0	1/1:4,12:16:35.97:329,36,0	1/1:3,10:13:32.95:288,33,0	1/1:6,17:23:62.98:561,63,0	1/1:3,21:24:66.01:598,66,0	1/1:4,14:18:45.01:408,45,0	1/1:4,19:23:47.05:418,47,0	0/0:21,0:21:57.16:0,57,647	0/0:25,0:25:75.17:0,75,824	1/1:1,32:33:90.05:823,90,0	1/1:6,24:30:71.99:651,72,0	1/1:2,27:29:84.03:763,84,0	1/1:0,10:10:30.02:274,30,0
chr10	36779668	.	C	CA	1095.40	PASS	AB=0.926;AC=9;AF=0.161;AN=56;BaseQRankSum=12.525;DP=612;FS=0.000;HRun=0;HaplotypeScore=120.2141;InbreedingCoeff=0.6058;MQ=72.08;MQ0=0;MQRankSum=-2.656;QD=7.61;ReadPosRankSum=2.541;VQSLOD=3.3679;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:57.08:0,57,750	0/0:12,0:12:36.11:0,36,484	0/0:30,0:30:74.93:0,75,821	0/0:17,0:16:32.95:0,33,395	0/1:36,1:37:31.46:229,0,31	0/0:22,0:22:65.97:0,66,869	0/0:10,0:10:27.03:0,27,337	0/0:30,0:30:89.26:0,89,1046	0/1:16,2:18:16.37:141,0,16	0/0:43,0:43:99:0,128,1604	0/0:30,0:30:90.23:0,90,1212	0/0:22,0:22:63.19:0,63,848	0/0:21,0:21:63.16:0,63,827	0/0:15,0:15:42.14:0,42,579	0/0:25,0:25:75.07:0,75,960	0/1:17,2:19:48.62:125,0,49	1/1:19,0:19:29.76:157,30,0	0/0:13,0:13:36.12:0,36,500	0/0:22,0:22:60.04:0,60,758	0/0:20,0:20:59.84:0,60,722	0/0:12,0:12:36.07:0,36,460	0/0:18,0:18:54.14:0,54,710	0/0:17,0:17:51.16:0,51,689	0/0:12,0:12:28.94:0,29,438	0/0:23,0:23:69.08:0,69,862	1/1:32,6:38:57.54:454,58,0	0/0:35,0:35:99:0,100,1288	1/1:13,0:13:27.25:149,27,0
chr10	36779669	.	C	CA	2238.45	PASS	AB=0.810;AC=12;AF=0.214;AN=56;BaseQRankSum=11.684;DP=608;FS=12.312;HRun=0;HaplotypeScore=116.3830;InbreedingCoeff=0.8778;MQ=72.07;MQ0=0;MQRankSum=-4.507;QD=13.09;ReadPosRankSum=0.973;VQSLOD=4.4386;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:51.44:0,51,260	0/0:11,0:11:31.35:0,31,157	0/0:30,0:30:75.63:0,76,874	0/0:16,0:15:25.50:0,25,367	1/1:11,24:35:41.25:547,41,0	0/0:22,0:22:38.24:0,38,273	0/0:9,0:9:25.40:0,25,121	0/1:28,0:28:1.45:1,0,197	1/1:6,12:18:43.55:318,44,0	0/0:43,0:43:59.60:0,60,420	0/0:30,0:30:83.33:0,83,442	0/0:24,0:24:66.19:0,66,872	0/0:21,0:21:59.78:0,60,299	0/0:15,0:15:42.77:0,43,237	0/0:25,0:25:71.04:0,71,350	1/1:6,13:19:25.28:328,25,0	1/1:6,13:20:34.03:368,34,0	0/0:13,0:13:37.09:0,37,191	0/0:22,0:22:60.40:0,60,276	0/0:21,0:21:29.56:0,30,238	0/0:12,0:12:34.24:0,34,174	0/0:17,0:17:48.33:0,48,240	0/0:17,0:17:51.16:0,51,683	0/0:12,0:12:28.94:0,29,438	0/0:23,0:23:62.51:0,63,308	1/1:8,30:38:82.95:715,83,0	0/0:35,0:35:99:0,100,522	0/1:5,8:13:1.02:139,0,1
chr10	36779670	.	C	CA	3630.67	PASS	AB=1.000;AC=22;AF=0.393;AN=56;BaseQRankSum=6.264;DP=611;FS=3.713;HRun=0;HaplotypeScore=111.3163;InbreedingCoeff=0.2414;MQ=71.95;MQ0=0;MQRankSum=-3.631;QD=9.71;ReadPosRankSum=-3.444;VQSLOD=2.6966;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:6.88:0,7,52	0/0:11,0:11:17.89:0,18,47	0/0:30,0:30:68:0,68,788	0/0:16,0:15:29.97:0,30,375	1/1:10,24:35:71.28:693,71,0	0/0:21,0:21:11.10:0,11,60	0/1:10,0:10:8.89:34,0,9	0/1:27,0:27:15.72:25,0,16	1/1:5,12:17:39.25:381,39,0	0/1:43,0:43:32.57:33,0,46	0/0:30,0:30:27.13:0,27,128	0/0:26,0:26:69.19:0,69,889	0/0:22,0:22:12.57:0,13,62	0/1:15,0:15:0.01:0,0,65	0/1:25,0:25:30.01:30,0,46	1/1:4,13:17:36.66:376,37,0	1/1:5,14:19:51.02:473,51,0	0/0:13,0:13:3.52:0,4,36	0/1:22,0:22:19.33:75,0,19	0/1:21,0:21:33.53:80,0,34	0/1:12,0:12:23.16:27,0,23	0/0:17,0:17:4.35:0,4,37	0/0:17,0:17:51.16:0,51,686	0/0:12,0:12:28.12:0,28,428	0/1:25,0:25:30.99:62,0,31	1/1:9,30:39:99:1013,106,0	0/1:34,0:34:18.74:19,0,79	1/1:5,8:13:35.84:312,36,0
chr10	36781233	.	ATC	A	5854.50	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=13.494;DP=713;FS=12.161;HRun=0;HaplotypeScore=83.5393;InbreedingCoeff=0.9999;MQ=71.05;MQ0=5;MQRankSum=-2.779;QD=40.38;ReadPosRankSum=3.632;VQSLOD=6.2497;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,141,2686	0/0:11,0:11:33.11:0,33,638	0/0:29,0:28:75.23:0,75,1346	0/0:17,0:17:34.49:0,34,850	1/1:0,22:21:63.17:939,63,0	0/0:25,0:25:72.23:0,72,1348	0/0:17,0:17:51.17:0,51,976	0/0:37,0:37:99:0,102,1961	1/1:0,18:18:54.18:827,54,0	0/0:27,0:27:75.26:0,75,1438	0/0:16,0:16:48.15:0,48,883	0/0:32,0:32:93.32:0,93,1796	0/0:31,0:31:90.30:0,90,1694	0/0:25,0:25:72.23:0,72,1358	0/0:22,0:22:66.23:0,66,1275	1/1:0,33:33:84.29:1287,84,0	1/1:0,31:29:69.23:1057,69,0	0/0:16,0:16:48.16:0,48,927	0/0:19,0:19:57.19:0,57,1050	0/0:26,0:26:78.27:0,78,1487	0/0:32,0:32:90.31:0,90,1705	0/0:25,0:25:72.25:0,72,1389	0/0:30,0:30:90.30:0,90,1703	0/0:23,0:23:69.22:0,69,1286	0/0:35,0:35:99:0,105,1993	1/1:0,26:25:75.21:1103,75,0	0/0:25,0:25:75.24:0,75,1416	1/1:0,15:14:42.14:643,42,0
chr10	36781368	.	GA	G	3450.67	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=10.939;DP=653;FS=2.810;HRun=7;HaplotypeScore=62.2344;InbreedingCoeff=0.9900;MQ=80.78;MQ0=0;MQRankSum=-2.642;QD=25.19;ReadPosRankSum=3.020;VQSLOD=4.3471;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:48.14:0,48,590	0/0:10,0:10:30.09:0,30,367	0/0:20,0:20:45.12:0,45,545	0/0:14,0:14:31.34:0,31,371	1/1:5,21:26:57.12:581,57,0	0/0:23,0:23:63.17:0,63,756	0/0:17,0:17:45.14:0,45,566	0/0:28,0:28:69.69:0,70,869	1/1:1,23:24:69.16:704,69,0	0/0:23,0:23:66.21:0,66,830	0/0:30,0:30:84.24:0,84,1022	0/0:32,0:32:78.25:0,78,981	0/0:25,0:25:69.20:0,69,852	0/0:22,0:22:54.16:0,54,666	0/0:34,0:34:99:0,99,1245	1/1:1,27:28:72.16:735,72,0	1/1:1,20:21:57.13:582,57,0	0/0:10,0:10:21.03:0,21,247	0/0:25,0:25:54.17:0,54,679	0/0:30,0:30:84.24:0,84,1021	0/0:23,0:23:66.17:0,66,801	0/0:18,0:18:51.15:0,51,617	0/0:21,0:21:63.18:0,63,767	0/0:22,0:22:66.21:0,66,830	0/0:31,0:31:90.26:0,90,1099	1/1:5,18:23:10.35:421,10,0	0/0:40,0:40:99:0,111,1395	1/1:0,15:15:42.09:428,42,0
chr10	36781550	.	A	AATTG	12140.53	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=-14.407;DP=769;FS=1.072;HRun=0;HaplotypeScore=130.5398;InbreedingCoeff=0.9108;MQ=76.11;MQ0=1;MQRankSum=0.986;QD=39.16;ReadPosRankSum=-2.068;VQSLOD=4.7678;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:84.29:0,84,1353	1/1:0,12:12:30.10:736,30,0	0/0:34,0:32:39.12:0,39,562	0/0:18,0:15:26.92:0,27,316	0/1:32,0:32:29.79:30,0,275	0/0:33,0:33:69.21:0,69,1071	0/0:26,0:26:47.86:0,48,735	1/1:19,21:43:93.25:1752,93,0	0/0:21,0:21:32.97:0,33,277	0/0:31,0:31:72.24:0,72,1158	0/0:26,0:26:60.20:0,60,984	0/0:36,0:36:81.22:0,81,1218	1/1:11,31:43:75.26:1829,75,0	1/1:4,19:24:45.15:1103,45,0	0/0:54,0:54:99:0,132,2077	0/0:35,0:35:62.93:0,63,526	0/0:27,0:27:53.94:0,54,451	0/0:7,0:7:9.03:0,9,144	1/1:7,8:16:33.06:508,33,0	1/1:3,19:23:63.18:1288,63,0	1/1:3,27:30:39.13:956,39,0	1/1:8,12:20:36.08:787,36,0	0/0:16,0:16:45.15:0,45,731	0/0:30,0:30:66.21:0,66,1049	1/1:4,27:31:69.24:1687,69,0	0/0:22,0:20:33.44:0,33,296	1/1:8,25:35:60.04:1465,60,0	0/0:10,0:10:11.99:0,12,100
chr10	36781568	.	TTGAA	T	5070.51	PASS	AB=1.000;AC=14;AF=0.250;AN=56;BaseQRankSum=4.167;DP=768;FS=1.660;HRun=0;HaplotypeScore=146.6491;InbreedingCoeff=0.7966;MQ=68.31;MQ0=1;MQRankSum=1.730;QD=24.86;ReadPosRankSum=1.607;VQSLOD=4.6026;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,108,2103	0/0:13,0:13:36.07:0,36,662	0/0:30,0:25:62.22:0,62,1055	0/0:19,0:15:38.13:0,38,547	1/1:2,29:31:83.70:1090,84,0	0/0:32,0:32:93.17:0,93,1776	0/0:20,0:20:57.10:0,57,1144	0/1:44,0:44:89.86:90,0,1497	1/1:2,22:24:33.11:601,33,0	0/0:30,0:30:90.24:0,90,1979	0/0:25,0:25:72.18:0,72,1600	0/0:33,0:33:96.22:0,96,2079	0/0:46,0:46:99:0,114,1958	0/0:28,0:28:66.18:0,66,1138	0/0:51,0:51:99:0,150,3356	1/1:0,33:33:63.22:1192,63,0	1/1:0,25:25:54.19:1020,54,0	0/0:8,0:8:20.99:0,21,283	0/1:18,0:17:24.92:25,0,461	0/0:31,0:30:14.26:0,14,1220	0/0:33,0:33:54.10:0,54,869	0/0:19,0:19:14.19:0,14,675	0/0:18,0:18:54.15:0,54,1190	0/0:26,0:26:75.21:0,75,1689	0/0:33,0:33:81.24:0,81,1421	1/1:2,19:19:48.14:827,48,0	0/0:33,0:33:72.04:0,72,1223	1/1:0,8:8:12.04:227,12,0
chr10	36783292	.	TA	T	3471.19	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-0.228;DP=626;FS=12.150;HRun=11;HaplotypeScore=79.5255;InbreedingCoeff=0.9783;MQ=69.02;MQ0=1;MQRankSum=-0.622;QD=17.53;ReadPosRankSum=0.350;VQSLOD=3.7108;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:68.37:0,68,702	1/1:1,4:5:11.98:99,12,0	0/0:9,2:9:20.54:0,21,176	0/0:15,0:14:7.85:0,8,170	0/0:6,1:33:52.78:0,53,373	0/0:29,0:29:58.12:0,58,742	0/0:14,0:14:33.04:0,33,339	1/1:1,27:29:79.88:637,80,0	0/0:3,0:16:36.81:0,37,181	0/0:32,2:34:30.04:0,30,690	0/0:25,0:26:71.74:0,72,720	0/0:23,0:24:47.03:0,47,520	1/1:4,18:23:17.96:343,18,0	1/1:3,14:17:29.96:246,30,0	0/0:29,0:30:87.07:0,87,903	0/0:2,0:26:65.63:0,66,340	0/0:5,0:37:85.43:0,85,429	0/0:21,1:22:17.44:0,17,382	1/1:7,15:22:44.88:363,45,0	1/1:7,17:24:41.92:345,42,0	1/1:3,9:12:26.95:222,27,0	1/1:5,23:28:62.77:503,63,0	0/0:21,0:21:48.09:0,48,496	0/0:8,0:8:15.04:0,15,160	1/1:2,14:16:29.47:245,29,0	0/0:5,0:36:93.53:0,94,515	1/1:3,19:22:56.93:468,57,0	0/0:5,0:18:39.76:0,40,199
chr10	36787040	.	GA	G	12867.04	PASS	AB=1.000;AC=47;AF=0.839;AN=56;BaseQRankSum=10.625;DP=692;FS=2.571;HRun=9;HaplotypeScore=77.5950;InbreedingCoeff=0.8596;MQ=73.17;MQ0=0;MQRankSum=0.125;QD=21.70;ReadPosRankSum=2.242;VQSLOD=5.7821;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,22:26:26.43:463,26,0	1/1:0,6:6:12.01:110,12,0	0/1:12,0:11:1.57:2,0,90	0/0:12,0:11:2.91:0,3,85	1/1:0,31:31:84.03:768,84,0	1/1:4,33:37:90.05:824,90,0	1/1:1,12:13:36.02:329,36,0	1/1:7,25:32:75:676,75,0	1/1:2,22:24:54.03:494,54,0	1/1:3,31:34:89.99:807,90,0	1/1:4,21:25:60.03:549,60,0	0/0:36,0:36:90.22:0,90,1002	1/1:7,26:33:66.02:604,66,0	1/1:3,23:26:66.03:604,66,0	1/1:3,30:33:78.04:714,78,0	1/1:0,33:33:90.05:824,90,0	1/1:3,20:24:53.06:473,53,0	1/1:4,21:25:60.03:549,60,0	1/1:1,19:20:57.02:518,57,0	1/1:4,22:26:63.02:576,63,0	1/1:0,18:18:54.03:494,54,0	1/1:2,17:19:10.39:349,10,0	0/0:28,0:28:81.22:0,81,915	0/0:23,0:23:60.14:0,60,663	1/1:1,28:29:72.04:659,72,0	1/1:1,22:23:66.04:604,66,0	1/1:3,28:31:75.04:687,75,0	1/1:4,9:13:21:192,21,0
chr10	36788162	.	C	CA	9356.41	PASS	AB=0.577;AC=42;AF=0.750;AN=56;BaseQRankSum=-8.343;DP=635;FS=1.937;HRun=11;HaplotypeScore=83.8325;InbreedingCoeff=0.5828;MQ=75.02;MQ0=0;MQRankSum=-0.948;QD=17.55;ReadPosRankSum=-0.045;VQSLOD=5.5960;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,22:24:54.11:548,54,0	1/1:2,6:8:18.04:183,18,0	0/0:27,0:23:12.70:0,13,103	0/0:13,0:12:8.46:0,8,56	1/1:7,25:34:38.39:627,38,0	1/1:5,19:25:10.47:455,10,0	1/1:4,11:15:4.71:222,5,0	1/1:10,22:32:48.98:576,49,0	1/1:6,11:17:42.01:401,42,0	1/1:11,33:43:35.21:847,35,0	0/1:7,16:24:13.43:370,0,13	0/0:20,0:23:56.65:0,57,411	1/1:7,24:33:46.42:533,46,0	1/1:14,5:19:14.76:300,15,0	1/1:6,19:25:24.82:423,25,0	0/1:13,14:28:45.99:276,0,46	1/1:6,15:23:15.51:310,16,0	1/1:8,10:18:33.04:326,33,0	1/1:5,10:16:15.60:295,16,0	1/1:6,22:30:55.91:534,56,0	1/1:2,7:9:22.86:218,23,0	0/1:2,17:19:7.40:296,0,7	0/0:23,0:26:53.88:0,54,389	0/0:13,0:13:38.85:0,39,300	1/1:4,21:26:33.71:509,34,0	1/1:5,21:26:33.39:497,33,0	0/1:5,24:30:13.17:414,0,13	1/1:0,7:8:20.88:197,21,0
chr10	36790548	.	CT	C	2075.21	PASS	AB=0.825;AC=32;AF=0.571;AN=56;BaseQRankSum=6.772;DP=615;FS=0.802;HRun=14;HaplotypeScore=96.1407;InbreedingCoeff=0.6373;MQ=75.29;MQ0=6;MQRankSum=-0.997;QD=5.62;ReadPosRankSum=4.377;VQSLOD=2.7672;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:20:18.91:0,19,112	0/1:3,2:6:18.93:32,0,19	0/0:40,0:20:27.02:0,27,199	0/0:35,0:20:23.82:0,24,182	1/1:5,0:37:54.92:161,55,0	0/0:13,0:13:24:0,24,215	0/1:10,0:11:6.34:6,0,110	1/1:16,13:31:1.52:196,2,0	1/1:2,0:18:22.57:66,23,0	0/1:22,3:25:10.67:11,0,321	0/0:33,4:37:27.68:0,28,614	0/0:13,0:13:27.03:0,27,248	1/1:9,10:19:22.79:150,23,0	1/1:11,6:20:14.83:79,15,0	0/0:26,2:28:1.23:0,1,415	1/1:6,0:31:44.78:131,45,0	1/1:2,0:16:26.39:80,26,0	0/0:16,1:18:21.08:0,21,294	0/1:11,3:14:42.28:44,0,42	1/1:8,16:26:45.67:299,46,0	1/1:5,2:7:7.97:47,8,0	1/1:0,10:11:28.77:190,29,0	0/0:25,0:25:39.32:0,39,337	0/0:14,1:15:9.42:0,9,214	1/1:11,15:30:49.58:359,50,0	1/1:4,0:27:16.32:92,16,0	1/1:5,24:33:49.24:310,49,0	1/1:1,0:6:10.18:30,10,0
chr10	36790844	.	AT	A	8909.65	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=10.488;DP=599;FS=0.000;HRun=8;HaplotypeScore=61.4974;InbreedingCoeff=0.9321;MQ=80.47;MQ0=0;MQRankSum=-0.694;QD=23.57;ReadPosRankSum=1.136;VQSLOD=5.4172;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,26:26:66.10:636,66,0	1/1:0,4:4:6.01:58,6,0	0/0:11,0:11:3.73:0,4,198	0/0:20,0:19:36.39:0,36,372	0/0:34,0:34:90.23:0,90,1061	1/1:1,18:19:51.08:493,51,0	1/1:4,21:25:39.06:377,39,0	1/1:3,23:26:69.10:665,69,0	0/0:14,0:14:39.12:0,39,471	1/1:3,20:23:60.09:579,60,0	1/1:2,20:22:54.08:520,54,0	0/0:18,0:18:51.16:0,51,616	1/1:2,15:17:39.06:377,39,0	1/1:1,18:19:51.08:493,51,0	1/1:6,28:34:81.12:782,81,0	0/0:26,0:26:72.19:0,72,853	0/0:32,0:32:93.28:0,93,1121	1/1:2,15:17:5.83:340,6,0	1/1:1,18:19:54.08:519,54,0	1/1:3,21:24:63.10:608,63,0	1/1:1,26:26:66.11:637,66,0	1/1:1,18:19:51.08:493,51,0	0/0:24,0:24:69.21:0,69,833	0/0:13,0:13:36.11:0,36,435	1/1:3,22:25:57.08:550,57,0	0/0:27,0:27:69.21:0,69,833	1/1:0,32:32:81.13:782,81,0	0/0:2,0:2:6.02:0,6,72
chr10	36794878	.	AT	A	8720.65	PASS	AB=0.563;AC=33;AF=0.589;AN=56;BaseQRankSum=14.337;DP=601;FS=3.328;HRun=9;HaplotypeScore=57.0090;InbreedingCoeff=0.9131;MQ=70.21;MQ0=0;MQRankSum=-0.987;QD=23.19;ReadPosRankSum=0.631;VQSLOD=5.7394;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:2,7:9:13.61:144,0,14	1/1:2,4:6:12:110,12,0	0/0:8,0:8:12.03:0,12,135	0/0:7,0:7:12.09:0,12,110	0/0:41,0:41:99:0,105,1212	1/1:0,18:18:48.03:439,48,0	1/1:2,5:7:15:137,15,0	1/1:6,31:37:89.99:809,90,0	0/0:12,0:12:31.34:0,31,349	1/1:4,34:38:99:933,102,0	1/1:1,26:27:75.04:686,75,0	0/0:15,0:15:42.11:0,42,467	1/1:1,19:20:54.03:494,54,0	1/1:2,21:24:65.07:583,65,0	1/1:3,31:34:90.05:824,90,0	0/0:25,0:25:63.19:0,63,727	0/0:24,0:24:66.19:0,66,753	1/1:0,11:11:29.95:261,30,0	1/1:6,22:28:66.03:604,66,0	1/1:5,24:30:71.07:638,71,0	1/1:2,14:16:36.02:330,36,0	1/1:1,9:10:27.01:247,27,0	0/0:27,1:28:47.75:0,48,803	0/0:10,0:10:21.02:0,21,228	1/1:4,27:31:81.04:741,81,0	0/0:30,0:29:78.22:0,78,891	1/1:2,28:30:81.04:741,81,0	0/0:25,0:24:66.13:0,66,717
chr10	36795133	.	CAAA	C	7629.66	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-0.248;DP=549;FS=1.153;HRun=16;HaplotypeScore=90.0197;InbreedingCoeff=0.9418;MQ=70.35;MQ0=1;MQRankSum=-1.949;QD=16.66;ReadPosRankSum=6.649;VQSLOD=3.8290;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,9:12:26.91:262,27,0	1/1:3,5:8:15.01:162,15,0	0/0:23,0:13:15.89:0,16,265	0/0:15,0:12:19.43:0,19,193	1/1:11,21:33:35.06:356,35,0	1/1:7,16:25:44.82:455,45,0	1/1:7,11:18:20.79:226,21,0	1/1:12,22:34:62.64:662,63,0	1/1:3,11:14:17.94:194,18,0	1/1:9,15:29:44.53:542,45,0	1/1:3,12:15:26.72:275,27,0	0/0:17,0:21:39.11:0,39,606	1/1:7,14:24:32.53:286,33,0	1/1:3,10:13:16.35:191,16,0	1/1:2,16:19:35.88:371,36,0	1/1:5,21:28:19.45:502,19,0	1/1:6,11:20:26.65:246,27,0	1/1:2,9:12:4.23:223,4,0	1/1:8,11:21:35.70:347,36,0	1/1:3,16:20:24.19:272,24,0	1/1:4,4:8:11.96:114,12,0	1/1:8,7:16:17.67:179,18,0	0/0:12,0:19:46.61:0,47,688	0/0:8,0:11:25.26:0,25,339	1/1:5,14:23:43.30:438,43,0	1/1:4,15:20:47.73:487,48,0	1/1:9,17:29:55.28:567,55,0	1/1:3,12:16:25.23:273,25,0
chr10	36795631	.	T	TA	18012.15	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-18.457;DP=741;FS=0.288;HRun=4;HaplotypeScore=63.4215;InbreedingCoeff=0.9973;MQ=78.39;MQ0=0;MQRankSum=-4.668;QD=36.76;ReadPosRankSum=2.748;VQSLOD=4.9080;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,38:39:99:1436,105,0	1/1:1,12:13:36.12:493,36,0	0/0:19,0:19:51.12:0,51,562	0/0:18,0:18:54.15:0,54,606	0/0:36,0:36:99:0,105,1180	1/1:0,41:41:99:1601,117,0	1/1:3,17:20:51.17:698,51,0	1/1:2,47:49:99:1912,141,0	0/0:28,0:28:84.19:0,84,924	1/1:4,21:25:66.22:899,66,0	1/1:1,25:26:72.24:985,72,0	0/0:22,0:22:66.17:0,66,738	1/1:2,33:35:96.32:1313,96,0	1/1:2,24:26:72.24:985,72,0	1/1:1,39:40:99:1560,114,0	0/0:29,0:29:84.24:0,84,953	0/0:29,0:29:78.19:0,78,872	1/1:1,7:8:21.07:287,21,0	1/1:1,21:22:63.21:859,63,0	1/1:3,35:38:99:1374,102,0	1/1:3,17:20:42.14:575,42,0	1/1:2,21:23:54.18:738,54,0	0/0:22,0:22:57.16:0,57,647	0/0:19,0:19:57.14:0,57,635	1/1:1,37:38:99:1355,99,0	0/0:20,1:21:19.11:0,19,597	1/1:1,26:27:69.23:944,69,0	0/0:8,0:8:18.05:0,18,204
chr10	36797754	.	CGTAG	C	32498.74	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-2.003;DP=711;FS=4.447;HRun=0;HaplotypeScore=145.1283;InbreedingCoeff=0.9470;MQ=83.69;MQ0=0;MQRankSum=-11.278;QD=49.02;ReadPosRankSum=7.398;VQSLOD=5.0595;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,34:36:90.31:1793,90,0	1/1:1,9:10:27.09:538,27,0	0/0:18,0:18:54.19:0,54,1352	0/0:30,0:30:84.11:0,84,1943	1/1:5,35:40:75.17:1415,75,0	1/1:0,31:31:81.28:1615,81,0	1/1:1,25:26:54.19:1072,54,0	1/1:5,35:40:99:1844,102,0	1/1:0,28:28:72.25:1426,72,0	1/1:3,32:35:99:1902,99,0	1/1:0,20:20:54.19:1073,54,0	1/1:0,28:28:72.20:1395,72,0	1/1:4,28:33:84.29:1662,84,0	1/1:1,18:19:45.15:897,45,0	1/1:0,36:36:90.31:1795,90,0	1/1:0,28:28:81.28:1594,81,0	1/1:0,11:11:24.08:479,24,0	1/1:0,3:3:6.02:119,6,0	1/1:0,14:14:39.05:697,39,0	1/1:0,22:22:54.19:1077,54,0	1/1:1,25:26:61.09:1199,61,0	1/1:0,22:22:48.16:957,48,0	1/1:3,22:25:57.20:1136,57,0	1/1:2,23:25:56.29:1135,56,0	1/1:0,20:20:51.18:1017,51,0	1/1:2,31:33:87.30:1731,87,0	1/1:1,32:33:90.31:1795,90,0	1/1:0,19:19:57.20:1137,57,0
chr10	36798183	.	AT	A	3924.82	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=12.521;DP=748;FS=3.364;HRun=3;HaplotypeScore=67.2227;InbreedingCoeff=0.9985;MQ=80.24;MQ0=0;MQRankSum=-1.560;QD=34.43;ReadPosRankSum=2.711;VQSLOD=4.4686;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:63.19:0,63,884	0/0:7,0:7:21.06:0,21,284	0/0:23,0:23:54.14:0,54,720	0/0:15,0:14:33.11:0,33,443	1/1:1,30:31:90.28:1116,90,0	0/0:35,0:35:99:0,102,1451	0/0:18,0:18:51.17:0,51,727	0/0:30,0:30:84.28:0,84,1202	1/1:1,27:28:81.25:1004,81,0	0/0:41,0:41:99:0,120,1700	0/0:34,0:34:99:0,99,1403	0/0:35,0:35:99:0,102,1458	0/0:30,0:30:90.27:0,90,1273	0/0:30,0:30:87.28:0,87,1235	0/0:33,0:33:99:0,99,1404	1/1:0,31:31:87.27:1078,87,0	1/1:2,22:24:60.15:726,60,0	0/0:10,0:10:30.10:0,30,432	0/0:19,0:19:54.18:0,54,774	0/0:36,0:36:99:0,99,1369	0/0:16,0:16:48.14:0,48,671	0/0:33,0:33:96.32:0,96,1381	0/0:34,0:34:99:0,102,1469	0/0:20,0:20:54.18:0,54,777	0/0:28,0:28:84.21:0,84,1150	0/0:38,0:38:99:0,108,1548	0/0:35,0:35:99:0,105,1507	0/0:11,0:11:30.10:0,30,432
chr10	36800685	.	T	TA	15755.28	PASS	AB=0.917;AC=35;AF=0.625;AN=56;BaseQRankSum=-1.037;DP=687;FS=3.493;HRun=4;HaplotypeScore=135.5661;InbreedingCoeff=0.9231;MQ=75.65;MQ0=0;MQRankSum=-1.486;QD=34.03;ReadPosRankSum=1.687;VQSLOD=3.1829;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,29:30:78.26:1067,78,0	1/1:0,8:8:24.04:307,24,0	0/0:21,0:19:43.53:0,44,474	0/0:24,0:21:50.10:0,50,536	0/0:34,0:34:99:0,99,1086	1/1:1,25:26:66.22:903,66,0	1/1:0,18:18:48.16:652,48,0	1/1:0,39:39:99:1527,114,0	0/0:25,0:25:72.20:0,72,816	1/1:1,32:33:96.32:1313,96,0	1/1:0,15:15:42.14:575,42,0	0/0:25,0:25:69.18:0,69,769	1/1:0,26:26:66.21:895,66,0	1/1:4,31:35:84.28:1148,84,0	1/1:1,35:36:99:1395,102,0	0/0:30,0:30:81.21:0,81,901	0/0:16,0:16:45.10:0,45,492	1/1:0,12:11:30.10:410,30,0	1/1:2,17:19:54.17:724,54,0	1/1:3,20:23:57.19:779,57,0	1/1:1,10:11:27.09:369,27,0	1/1:1,20:21:59.79:789,60,0	0/0:30,0:30:87.23:0,87,977	0/0:10,0:10:27.08:0,27,306	1/1:2,29:31:84.28:1149,84,0	0/1:30,3:33:29.39:29,0,858	1/1:1,46:46:99:1723,126,0	0/0:9,0:9:27.08:0,27,306
chr10	36801740	.	G	GATT	4084.31	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-10.817;DP=393;FS=0.501;HRun=0;HaplotypeScore=55.0914;InbreedingCoeff=0.9288;MQ=73.46;MQ0=0;MQRankSum=-0.765;QD=44.88;ReadPosRankSum=2.354;VQSLOD=5.1227;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:21:54:0,54,760	0/0:2,0:2:6.02:0,6,100	0/0:6,0:6:15.02:0,15,180	0/0:13,0:12:20.89:0,21,239	1/1:1,22:23:50.98:974,51,0	0/0:11,0:11:33.11:0,33,528	0/0:12,0:12:27.09:0,27,432	0/0:35,0:35:87.25:0,87,1278	1/1:1,10:11:30.07:586,30,0	0/0:19,0:19:54.14:0,54,789	0/0:17,0:17:45.02:0,45,553	0/0:5,0:5:15.05:0,15,247	0/0:14,0:14:39.12:0,39,619	0/0:15,0:15:45.10:0,45,695	0/0:19,0:19:57.13:0,57,823	1/1:2,19:23:51.16:1021,51,0	1/1:1,13:14:27.01:520,27,0	0/0:20,0:20:60.21:0,60,995	0/0:17,0:17:51.12:0,51,705	0/0:16,0:16:48:0,48,690	0/0:9,0:9:24.08:0,24,399	0/0:6,0:6:18.03:0,18,271	0/0:8,0:8:21.07:0,21,332	0/0:1,0:1:3.01:0,3,50	0/0:14,0:14:42.13:0,42,642	1/1:1,13:14:42.06:732,42,0	0/0:22,0:22:63.15:0,63,908	1/1:2,4:6:12.04:251,12,0
chr10	36802590	.	GCCTGCTGTATAACCATACTTACCATTGGACT	G	11299.23	PASS	AB=0.558;AC=11;AF=0.196;AN=56;BaseQRankSum=11.579;DP=650;FS=0.000;HRun=0;HaplotypeScore=492.0670;InbreedingCoeff=0.8636;MQ=85.51;MQ0=0;MQRankSum=-10.169;QD=122.82;ReadPosRankSum=4.611;VQSLOD=3.8304;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:87.30:0,87,10735	0/0:9,0:9:24.08:0,24,3131	0/0:29,0:29:78.27:0,78,5252	0/0:31,0:33:93.28:0,93,7063	1/1:7,12:19:27.09:2025,27,0	0/0:23,0:22:66.23:0,66,7890	0/0:19,0:19:57.20:0,57,7177	0/0:39,0:39:99:0,105,9497	1/1:4,13:17:30.10:2446,30,0	0/0:33,0:33:99:0,99,11000	0/0:19,0:19:54.17:0,54,6217	0/0:29,0:29:87.30:0,87,11434	0/0:29,0:29:87.28:0,87,11045	0/0:34,0:34:99:0,99,12303	0/0:34,0:34:96.31:0,96,10910	0/1:5,19:24:99:3138,0,386	1/1:5,7:12:12.04:879,12,0	0/0:8,0:8:18.06:0,18,2500	0/0:15,0:15:41.51:0,42,2927	0/0:30,0:30:87.30:0,87,9967	0/0:29,0:29:84.29:0,84,10200	0/0:19,0:19:57.18:0,57,7143	0/0:24,0:24:72.25:0,72,7800	0/0:22,0:22:63.22:0,63,7888	0/0:28,0:28:84.29:0,84,10161	1/1:4,12:16:33.10:2077,33,0	0/0:24,0:23:72.25:0,72,8859	1/1:1,3:4:9.03:734,9,0
chr10	36803673	.	GA	G	9492.67	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=10.383;DP=604;FS=5.067;HRun=7;HaplotypeScore=60.4932;InbreedingCoeff=0.9986;MQ=77.78;MQ0=0;MQRankSum=-1.198;QD=24.79;ReadPosRankSum=1.995;VQSLOD=5.4431;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,34:39:87.19:886,87,0	1/1:2,10:12:27.06:275,27,0	0/0:21,0:21:50.98:0,51,542	0/0:12,0:11:18.56:0,19,169	0/0:25,0:25:60.18:0,60,738	1/1:1,25:26:69.15:702,69,0	1/1:0,23:23:48.06:488,48,0	1/1:3,27:30:78.10:761,78,0	0/0:21,0:21:63.19:0,63,775	1/1:3,21:24:51.08:510,51,0	1/1:2,21:23:66.15:669,66,0	0/0:17,0:17:48.13:0,48,577	1/1:1,13:14:36.04:354,36,0	1/1:0,16:16:42.09:427,42,0	1/1:1,21:22:54.07:537,54,0	0/0:20,0:20:54.17:0,54,675	0/0:22,0:22:66.19:0,66,811	1/1:1,15:16:42.09:427,42,0	1/1:2,20:22:60.06:587,60,0	1/1:3,19:22:54.12:549,54,0	1/1:2,26:28:72.16:733,72,0	1/1:1,16:17:39.08:397,39,0	0/0:31,0:31:81.24:0,81,986	0/0:18,0:18:48.07:0,48,543	1/1:1,25:25:63.14:642,63,0	0/0:25,0:25:75.23:0,75,926	1/1:1,22:23:54.12:548,54,0	0/0:9,0:9:27.09:0,27,338
chr10	36804590	.	A	AT	9727.35	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-5.979;DP=591;FS=2.352;HRun=9;HaplotypeScore=61.3327;InbreedingCoeff=0.9752;MQ=73.34;MQ0=0;MQRankSum=-0.716;QD=25.46;ReadPosRankSum=-1.092;VQSLOD=5.2550;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,25:26:66.18:730,66,0	1/1:3,12:15:30.08:332,30,0	0/0:14,0:13:23.92:0,24,197	0/0:8,0:8:8.48:0,8,90	0/0:21,0:21:56.98:0,57,495	1/1:2,24:26:57.15:631,57,0	1/1:2,11:13:7.03:306,7,0	1/1:8,24:32:25.98:718,26,0	0/0:12,0:12:32.98:0,33,286	1/1:6,14:21:21.91:453,22,0	1/1:2,16:18:45.08:484,45,0	0/0:32,0:32:89.96:0,90,778	1/1:4,19:23:51.14:564,51,0	1/1:4,12:17:45.11:485,45,0	1/1:2,25:27:60.45:686,60,0	0/0:34,0:34:92.98:0,93,807	0/0:24,0:26:76.04:0,76,632	1/1:5,14:19:16.08:405,16,0	1/1:3,14:17:42.03:448,42,0	1/1:5,31:36:84.15:902,84,0	1/1:1,13:14:39.11:431,39,0	1/1:1,11:12:27.96:300,28,0	0/0:11,0:12:32.03:0,32,266	0/0:16,0:16:44.97:0,45,386	1/1:4,29:34:72.99:989,73,0	0/0:21,0:21:59.99:0,60,521	1/1:2,30:31:78.21:863,78,0	0/0:13,0:13:32.97:0,33,286
chr10	36805881	.	C	CTT	5040.59	PASS	AB=0.612;AC=40;AF=0.714;AN=56;BaseQRankSum=2.577;DP=573;FS=4.586;HRun=11;HaplotypeScore=84.9667;InbreedingCoeff=0.4749;MQ=71.83;MQ0=1;MQRankSum=-0.631;QD=10.46;ReadPosRankSum=-0.884;VQSLOD=3.0241;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,2:37:64.07:329,64,0	1/1:4,0:6:2.50:9,2,0	0/0:14,0:13:20.76:0,21,179	0/0:11,0:11:8.55:0,9,67	1/1:6,13:21:40.14:489,40,0	0/1:5,1:17:0.63:92,0,1	0/1:2,1:14:13.23:61,0,13	1/1:7,1:28:24.36:207,24,0	1/1:7,6:14:27.84:302,28,0	1/1:6,2:23:41.92:220,42,0	1/1:3,0:12:14.70:50,15,0	0/0:16,0:18:17.59:0,18,206	0/1:9,1:23:5.13:90,0,5	1/1:3,0:15:10.73:56,11,0	1/1:7,1:26:12.35:145,12,0	1/1:2,15:17:24.08:348,24,0	1/1:4,32:38:71.72:985,72,0	1/1:3,0:16:35.32:142,35,0	0/1:11,1:21:23.92:107,0,24	0/1:7,1:22:39.67:108,0,40	1/1:6,1:21:25.97:139,26,0	1/1:5,0:31:31.05:166,31,0	0/0:26,0:26:50.91:0,51,482	0/0:19,0:21:32.79:0,33,420	0/1:5,0:12:27.50:27,0,63	1/1:12,14:27:16.03:500,16,0	1/1:15,0:26:48.69:250,49,0	1/1:2,10:12:15.05:217,15,0
chr10	36809803	.	AATGAT	A	1937	PASS	AB=0.984;AC=19;AF=0.352;AN=54;BaseQRankSum=7.996;DP=227;FS=38.513;HRun=0;HaplotypeScore=59.8384;InbreedingCoeff=-0.3319;MQ=60.51;MQ0=0;MQRankSum=-3.023;QD=11.07;ReadPosRankSum=-1.906;VQSLOD=0.3475;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:9,0:9:29.03:29,0,155	0/1:4,0:4:28.07:28,0,221	0/0:6,0:5:8.82:0,9,123	0/0:9,0:7:14.70:0,15,222	0/1:9,0:9:99:157,0,261	0/1:6,0:6:99:149,0,163	0/1:3,0:3:54.40:75,0,54	0/1:27,12:37:99:571,0,1091	0/0:6,0:6:12.01:0,12,201	0/0:7,0:7:21.07:0,21,565	0/0:4,0:4:9.03:0,9,206	0/0:4,0:4:12.04:0,12,348	0/1:9,0:9:99:140,0,360	0/1:4,0:4:28.33:28,0,96	0/0:6,0:6:12.04:0,12,254	0/0:6,0:6:6.89:0,7,91	0/1:19,0:19:28.37:28,0,626	0/1:23,0:22:99:455,0,303	0/1:10,0:10:36.08:36,0,527	1/1:1,1:2:3.01:40,3,0	1/1:5,0:5:6.02:102,6,0	./.	0/0:2,0:2:6.02:0,6,190	0/0:1,0:1:3.01:0,3,94	0/1:6,0:6:99:145,0,203	0/1:4,0:4:12.72:13,0,137	0/1:7,0:6:18.22:18,0,228	0/1:16,0:16:78.80:79,0,350
chr10	36809808	.	T	TATAATAATAATAATAATA	8414.76	PASS	AB=1.000;AC=41;AF=0.820;AN=50;BaseQRankSum=0.492;DP=248;FS=6.439;HRun=0;HaplotypeScore=94.2874;InbreedingCoeff=0.4239;MQ=60.70;MQ0=0;MQRankSum=-2.016;QD=37.23;ReadPosRankSum=-1.559;VQSLOD=2.7762;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,4:11:9.03:360,9,0	1/1:3,0:4:3.01:58,3,0	0/0:5,0:4:3.01:0,3,65	0/1:10,0:8:9.84:10,0,41	1/1:6,0:9:12.04:271,12,0	1/1:3,0:6:12.04:559,12,0	1/1:2,0:3:6.02:271,6,0	1/1:29,0:32:54.16:1423,54,0	1/1:2,0:8:6.02:338,6,0	./.	./.	0/0:4,0:4:9.03:0,9,441	1/1:8,0:11:18.06:619,18,0	1/1:2,0:8:6.02:350,6,0	1/1:3,3:7:3.01:254,3,0	1/1:2,0:5:3.01:175,3,0	1/1:11,0:23:6.02:324,6,0	1/1:12,0:22:54.19:1241,54,0	1/1:10,0:11:15.05:384,15,0	1/1:2,0:2:3.01:65,3,0	1/1:2,0:5:6.02:119,6,0	./.	0/0:3,0:3:6.02:0,6,294	0/0:1,0:1:3.01:0,3,109	1/1:5,0:9:9.03:483,9,0	1/1:2,0:4:9.03:177,9,0	1/1:3,0:6:6.02:349,6,0	1/1:5,10:26:9.03:584,9,0
chr10	36810926	.	G	GGGAT	10692.55	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=11.673;DP=771;FS=8.333;HRun=0;HaplotypeScore=154.1785;InbreedingCoeff=-0.2497;MQ=54.59;MQ0=9;MQRankSum=3.519;QD=16.66;ReadPosRankSum=3.474;VQSLOD=3.7536;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:32:75.77:492,0,76	0/1:12,0:12:39.68:41,0,40	0/0:36,0:18:12.04:0,12,179	0/0:28,0:17:29.78:0,30,334	1/1:10,14:25:29.71:303,30,0	0/1:28,0:26:28.04:431,0,28	0/1:24,0:21:75.15:75,0,130	0/1:44,0:43:99:170,0,387	1/1:3,18:25:3.01:70,3,0	0/1:29,0:28:99:432,0,161	0/1:30,0:29:16.40:711,0,16	0/0:24,0:24:54.15:0,54,800	0/1:43,0:42:99:662,0,164	0/1:27,0:27:86.42:350,0,86	0/1:30,0:30:92.79:415,0,93	1/1:42,1:40:69.46:1292,69,0	1/1:16,2:18:13.64:603,14,0	0/1:20,0:19:94.16:219,0,94	0/1:19,0:19:84.79:251,0,85	0/1:26,0:26:81.95:402,0,82	0/1:32,0:32:99:293,0,133	0/1:35,0:35:99:500,0,119	0/0:25,0:24:42.06:0,42,620	0/0:16,0:15:11.23:0,11,143	0/1:34,0:33:81.81:730,0,82	1/1:24,1:22:48.13:1001,48,0	0/1:17,0:16:98.81:223,0,99	1/1:20,2:22:54.10:1028,54,0
chr10	36810943	.	G	GGATA	13986.04	PASS	AB=1.000;AC=41;AF=0.732;AN=56;BaseQRankSum=-2.458;DP=792;FS=0.000;HRun=0;HaplotypeScore=200.2978;InbreedingCoeff=0.4437;MQ=48.37;MQ0=30;MQRankSum=0.855;QD=20.87;ReadPosRankSum=5.475;VQSLOD=4.3444;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:32,0:31:38.16:859,38,0	1/1:4,6:11:5.97:79,6,0	0/0:30,0:6:9.03:0,9,150	0/0:27,0:12:12.03:0,12,173	0/1:29,0:27:67.42:67,0,170	1/1:31,0:29:46.08:849,46,0	1/1:22,0:19:6.02:142,6,0	1/1:42,0:38:38.85:454,39,0	0/1:31,0:31:57.42:57,0,165	1/1:27,0:26:44.88:832,45,0	1/1:33,0:32:52.74:1199,53,0	0/0:24,0:24:56.95:0,57,812	1/1:42,5:45:32.47:1160,32,0	1/1:28,3:31:32.29:642,32,0	1/1:28,0:28:44.20:789,44,0	1/1:44,0:40:56.78:784,57,0	0/1:18,0:18:66.54:355,0,67	1/1:14,0:13:1.66:358,2,0	1/1:22,2:22:32.90:544,33,0	1/1:30,0:27:33.08:712,33,0	1/1:28,1:28:21.07:516,21,0	1/1:33,2:35:36.59:859,37,0	0/0:21,0:20:39.06:0,39,617	0/0:18,0:17:5.28:0,5,69	1/1:37,1:36:54.16:1248,54,0	0/1:26,0:23:65.40:468,0,65	1/1:21,0:20:30.74:466,31,0	0/1:26,0:25:25.77:547,0,26
chr10	36810959	.	AGAT	A	5687.38	PASS	AB=0.886;AC=31;AF=0.554;AN=56;BaseQRankSum=3.146;DP=728;FS=3.460;HRun=0;HaplotypeScore=218.0934;InbreedingCoeff=0.1055;MQ=45.92;MQ0=32;MQRankSum=7.456;QD=10.12;ReadPosRankSum=3.793;VQSLOD=4.5539;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:27,3:29:28.89:330,29,0	1/1:9,0:9:5.96:47,6,0	0/0:15,0:3:9.03:0,9,126	0/0:17,0:5:12.02:0,12,142	0/0:28,0:26:26.97:0,27,675	0/1:27,3:28:84.71:364,0,85	1/1:20,0:16:5.64:58,6,0	0/0:36,0:31:0.41:0,0,521	0/0:27,0:27:29.20:0,29,597	0/1:17,5:21:99:334,0,114	1/1:27,6:32:35.69:504,36,0	0/1:28,0:28:37.82:38,0,528	0/1:33,8:39:42.88:512,0,43	1/1:24,4:28:32.85:345,33,0	0/1:21,6:27:56.08:343,0,56	1/1:38,6:39:59.12:464,59,0	0/1:20,4:24:27.62:28,0,211	0/1:10,1:10:39.71:178,0,40	0/1:20,2:20:99:256,0,139	1/1:26,3:25:33.06:335,33,0	1/1:17,6:22:21.05:223,21,0	1/1:27,3:29:21.96:329,22,0	0/0:20,0:19:23.78:0,24,488	0/0:23,0:22:4.84:0,5,61	1/1:37,3:38:54.12:577,54,0	0/1:20,6:23:31.87:32,0,274	0/1:20,0:19:99:349,0,105	0/1:21,4:24:42.46:42,0,347
chr10	36810962	.	T	TA	6329.48	PASS	AB=0.904;AC=33;AF=0.589;AN=56;BaseQRankSum=5.299;DP=721;FS=6.299;HRun=1;HaplotypeScore=210.6730;InbreedingCoeff=0.2516;MQ=45.70;MQ0=30;MQRankSum=4.500;QD=11.05;ReadPosRankSum=1.052;VQSLOD=3.1332;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:27,1:29:35.52:356,36,0	1/1:9,2:11:5.75:59,6,0	0/0:12,1:3:9.03:0,9,126	0/0:13,0:5:12.03:0,12,142	0/0:28,0:26:42.75:0,43,538	1/1:28,3:29:5.15:439,5,0	1/1:12,7:15:5.81:57,6,0	0/1:35,2:31:67.83:68,0,601	0/0:24,0:24:14.90:0,15,400	0/1:21,1:21:68.10:378,0,68	1/1:29,4:32:50.78:522,51,0	0/0:15,0:28:8.67:0,9,575	0/1:35,6:39:12.78:515,0,13	1/1:19,8:27:32.89:343,33,0	1/1:24,3:27:46.11:417,46,0	1/1:29,13:37:58.85:539,59,0	0/1:24,0:24:29.31:45,0,29	0/1:8,2:9:49.04:180,0,49	0/1:17,3:18:99:327,0,149	1/1:18,9:23:33.06:335,33,0	1/1:15,9:24:21.05:223,21,0	1/1:26,5:30:35.81:386,36,0	0/0:14,0:20:37.65:0,38,508	0/0:8,1:21:5.48:0,5,62	1/1:28,13:39:54.12:578,54,0	0/1:24,1:22:53.06:53,0,108	0/1:13,10:22:59.48:452,0,59	0/1:27,0:26:57.31:57,0,68
chr10	36810965	.	TA	T	2797.22	PASS	AB=0.959;AC=20;AF=0.357;AN=56;BaseQRankSum=-1.072;DP=737;FS=0.000;HRun=1;HaplotypeScore=227.3973;InbreedingCoeff=0.0285;MQ=45.46;MQ0=30;MQRankSum=9.765;QD=6.63;ReadPosRankSum=5.587;VQSLOD=0.4599;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:29,1:29:30.01:289,30,0	0/1:11,0:10:7.93:8,0,70	0/0:12,0:3:9.03:0,9,129	0/0:11,0:4:9.03:0,9,132	0/0:28,0:26:38.53:0,39,621	0/1:29,3:30:99:162,0,204	1/1:15,4:15:5.60:45,6,0	0/0:48,2:44:66.44:0,66,1249	0/0:25,0:25:11.96:0,12,476	0/1:21,1:21:99:195,0,230	1/1:28,4:31:36.61:382,37,0	0/0:28,0:28:49.60:0,50,623	0/1:42,0:40:98.65:282,0,99	0/1:25,1:26:10.92:173,0,11	0/1:25,3:28:37.68:188,0,38	0/0:43,0:38:25.65:0,26,279	0/0:25,0:25:24.66:0,25,361	0/1:9,1:9:73.62:102,0,74	0/1:23,0:21:99:99,0,338	1/1:23,2:21:26.99:232,27,0	0/1:24,1:24:20.93:157,0,21	0/1:29,2:30:12.25:228,0,12	0/0:21,0:20:37.33:0,37,495	0/0:20,0:20:1.97:0,2,19	0/1:42,0:40:60.51:355,0,61	0/0:25,0:22:26.63:0,27,365	0/1:23,1:24:76.68:77,0,348	0/0:27,0:26:33.64:0,34,468
chr10	36810969	.	TA	T	2392.69	PASS	AB=0.915;AC=20;AF=0.370;AN=54;BaseQRankSum=-1.823;DP=723;FS=1.270;HRun=1;HaplotypeScore=227.2261;InbreedingCoeff=-0.0848;MQ=44.13;MQ0=28;MQRankSum=7.370;QD=5.28;ReadPosRankSum=1.315;VQSLOD=0.3219;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:27,3:29:8.87:222,9,0	0/0:12,0:11:11.51:0,12,130	./.	0/0:8,1:2:6.02:0,6,80	0/0:26,0:25:45.13:0,45,692	0/1:26,2:26:99:128,0,206	0/1:21,0:17:16.30:32,0,16	0/0:54,0:46:78.74:0,79,1616	0/0:25,0:25:22.94:0,23,536	0/1:17,4:20:99:139,0,264	1/1:26,6:31:36.41:350,36,0	0/1:25,0:25:16.17:16,0,500	0/1:34,6:38:99:271,0,216	0/1:21,5:26:63.66:157,0,64	0/1:22,6:28:37.60:195,0,38	0/0:37,5:37:41.74:0,42,537	0/0:21,4:25:28.74:0,29,337	0/1:10,1:10:91.96:92,0,102	0/1:20,2:20:43.15:43,0,466	1/1:23,3:22:26.94:214,27,0	0/1:19,6:24:63.92:140,0,64	0/1:27,3:29:60.08:180,0,60	0/0:16,0:15:15.13:0,15,311	0/1:19,0:19:0.03:1,0,0	0/1:41,2:41:99:318,0,164	0/0:19,6:22:34.87:0,35,442	0/1:26,0:25:63.34:63,0,545	0/0:22,3:24:42.89:0,43,610
chr10	36811001	.	T	TAGACAGAC	6638.11	PASS	AB=1.000;AC=34;AF=0.607;AN=56;BaseQRankSum=3.119;DP=733;FS=1.394;HRun=0;HaplotypeScore=259.3852;InbreedingCoeff=0.6962;MQ=56.92;MQ0=9;MQRankSum=-8.588;QD=13.22;ReadPosRankSum=-0.033;VQSLOD=3.6313;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:8,16:30:5.84:0,6,36	1/1:12,0:12:12.04:203,12,0	0/0:15,0:14:40.37:0,40,768	0/0:19,0:16:41.44:0,41,671	0/0:22,0:21:57.18:0,57,695	1/1:4,26:31:15.04:533,15,0	1/1:17,0:15:12.04:184,12,0	1/1:47,0:42:78.25:848,78,0	0/0:35,0:35:47.35:0,47,918	1/1:3,19:24:63.13:1044,63,0	1/1:6,17:22:7.25:63,7,0	0/0:22,0:22:42.10:0,42,686	1/1:42,0:40:35.77:491,36,0	1/1:26,0:26:18.06:329,18,0	1/1:6,29:39:5.87:144,6,0	0/1:46,0:41:77.83:78,0,574	0/0:30,0:30:3.37:0,3,38	1/1:12,0:11:3.08:498,3,0	1/1:24,0:21:51.83:624,52,0	1/1:23,0:19:8.85:134,9,0	1/1:24,0:23:6.32:100,6,0	1/1:23,0:22:19.08:253,19,0	0/0:18,0:18:33.11:0,33,546	0/0:18,0:18:2.25:0,2,47	1/1:39,0:37:29.90:492,30,0	0/1:18,0:15:31.88:32,0,186	1/1:29,0:28:38.95:589,39,0	0/0:21,0:20:24.01:0,24,191
chr10	36811005	.	T	TAGAC	6398.42	PASS	AB=1.000;AC=43;AF=0.768;AN=56;BaseQRankSum=7.311;DP=692;FS=0.450;HRun=0;HaplotypeScore=216.9589;InbreedingCoeff=0.6532;MQ=62.11;MQ0=6;MQRankSum=-3.883;QD=10.72;ReadPosRankSum=1.157;VQSLOD=4.2993;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:23:1.08:1,0,6	1/1:10,0:10:12:111,12,0	0/0:19,0:18:45.54:0,46,491	0/0:21,0:18:44.15:0,44,452	0/1:21,0:20:99:111,0,209	1/1:29,0:27:22.66:276,23,0	1/1:18,0:16:17.90:141,18,0	1/1:47,0:43:24.12:519,24,0	0/1:34,0:34:99:326,0,146	1/1:18,0:17:49.77:437,50,0	1/1:18,0:18:16.19:79,16,0	0/0:21,0:21:38.97:0,39,371	1/1:38,0:36:33.17:252,33,0	1/1:26,0:26:16.54:129,17,0	1/1:35,0:35:13.95:85,14,0	1/1:46,0:41:83.88:752,84,0	1/1:4,24:29:24.04:562,24,0	1/1:12,0:11:4.94:215,5,0	1/1:24,0:21:29.60:307,30,0	1/1:22,0:18:8.93:67,9,0	1/1:27,0:26:11.83:98,12,0	1/1:21,0:20:19.42:128,19,0	0/0:17,0:17:32.76:0,33,268	0/0:17,0:17:1.98:0,2,24	1/1:36,0:34:29.96:249,30,0	1/1:5,12:17:41.90:603,42,0	1/1:26,0:26:10.67:289,11,0	1/1:10,6:16:38.94:662,39,0
chr10	36811171	.	C	CCTT	15343.76	PASS	AB=0.957;AC=35;AF=0.625;AN=56;BaseQRankSum=-14.012;DP=653;FS=5.903;HRun=0;HaplotypeScore=86.6967;InbreedingCoeff=0.9231;MQ=69.51;MQ0=1;MQRankSum=-0.175;QD=36.88;ReadPosRankSum=1.488;VQSLOD=5.3071;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,26:33:56.41:1140,56,0	1/1:1,5:6:8.96:145,9,0	0/0:28,0:24:41.48:0,41,489	0/0:43,0:33:39.13:0,39,431	0/0:21,0:21:50.42:0,50,765	1/1:4,19:22:48.16:991,48,0	1/1:6,13:20:36.12:735,36,0	1/1:6,20:27:62.73:992,63,0	0/0:22,0:22:66.17:0,66,936	1/1:5,21:26:63.19:1156,63,0	1/1:3,19:22:59.91:1037,60,0	0/0:24,0:24:63.13:0,63,906	1/1:2,17:20:33.11:699,33,0	1/1:2,14:16:36.12:761,36,0	1/1:2,17:19:48.07:929,48,0	0/0:20,0:18:48.14:0,48,682	0/1:21,1:21:3.32:3,0,754	1/1:4,16:21:36.11:726,36,0	1/1:2,17:19:51.08:906,51,0	1/1:5,20:25:48.01:877,48,0	1/1:5,29:35:63.22:1335,63,0	1/1:3,23:27:60.03:1137,60,0	0/0:18,0:18:54.13:0,54,756	0/0:18,0:18:45.13:0,45,644	1/1:2,27:31:63.21:1215,63,0	0/0:23,1:24:5.62:0,6,930	1/1:6,16:23:27.98:559,28,0	0/0:18,0:18:45.14:0,45,660
chr10	36812120	.	A	AT	4701.05	PASS	AB=0.801;AC=26;AF=0.464;AN=56;BaseQRankSum=-7.140;DP=600;FS=3.636;HRun=14;HaplotypeScore=97.4839;InbreedingCoeff=0.4695;MQ=72.20;MQ0=7;MQRankSum=2.214;QD=12.47;ReadPosRankSum=-2.816;VQSLOD=3.7682;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:21,14:41:35.96:592,36,0	1/1:5,3:9:14.84:120,15,0	0/1:40,1:20:11.14:11,0,58	0/0:27,1:10:3.36:0,3,10	0/0:5,0:25:39.83:0,40,120	0/1:15,5:21:49.70:171,0,50	0/1:10,2:11:17.65:92,0,18	0/0:29,0:30:61.12:0,61,438	0/0:4,0:15:22.38:0,22,64	0/1:13,5:18:2.83:201,0,3	1/1:13,9:25:47.06:443,47,0	0/0:16,0:17:37.40:0,37,234	0/1:11,5:19:2.90:194,0,3	1/1:8,9:18:47.60:383,48,0	1/1:4,15:19:53.89:464,54,0	0/0:1,0:24:46.84:0,47,134	0/0:8,0:25:41.87:0,42,125	1/1:10,4:15:7.69:158,8,0	0/1:21,4:26:14.75:294,0,15	0/1:19,11:32:1.97:429,0,2	1/1:11,3:15:5.25:126,5,0	0/1:10,4:14:5.62:185,0,6	0/0:18,0:18:14.91:0,15,198	0/0:14,0:14:34.71:0,35,209	1/1:9,9:19:47.43:371,47,0	0/0:4,0:21:35.09:0,35,99	1/1:14,14:30:43.31:469,43,0	0/0:0,0:5:10.19:0,10,29
chr10	36812181	.	G	GA	12652.48	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-2.624;DP=554;FS=1.485;HRun=4;HaplotypeScore=81.7248;InbreedingCoeff=0.9953;MQ=78.52;MQ0=1;MQRankSum=-6.557;QD=26.92;ReadPosRankSum=3.329;VQSLOD=4.1141;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,25:32:78.24:1036,78,0	1/1:2,7:9:18.06:243,18,0	0/0:19,0:19:50.98:0,51,517	0/0:15,0:16:18.48:0,18,357	1/1:5,0:27:59.36:334,59,0	1/1:0,16:16:45.15:608,45,0	1/1:2,16:19:39.11:511,39,0	1/1:6,35:41:99:1357,108,0	1/1:3,0:18:42.90:230,43,0	1/1:1,19:22:60.16:789,60,0	1/1:0,15:15:42.14:568,42,0	0/0:19,0:19:57.15:0,57,635	1/1:3,11:14:33.10:430,33,0	1/1:0,12:12:36.12:486,36,0	1/1:4,14:18:54.14:692,54,0	1/1:2,0:23:60.38:309,60,0	1/1:5,0:28:53.62:322,54,0	1/1:0,17:17:45.15:608,45,0	1/1:4,17:21:54.07:655,54,0	1/1:6,19:25:57.18:747,57,0	1/1:0,17:17:39.09:507,39,0	1/1:3,14:17:30.10:406,30,0	0/0:17,0:17:44.98:0,45,479	0/0:13,0:13:36.09:0,36,399	1/1:5,10:15:27.07:337,27,0	1/1:0,0:25:71.99:374,72,0	1/1:4,25:29:75.22:980,75,0	1/1:2,0:9:23.11:126,23,0
chr10	36812931	.	T	TC	6736.57	PASS	AB=0.633;AC=42;AF=0.750;AN=56;BaseQRankSum=-5.701;DP=453;FS=1.071;HRun=9;HaplotypeScore=48.7082;InbreedingCoeff=0.4310;MQ=78.30;MQ0=2;MQRankSum=-0.020;QD=17.68;ReadPosRankSum=-0.669;VQSLOD=4.4591;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,25:32:28.23:538,28,0	0/1:2,6:8:4.97:168,0,5	0/0:20,0:15:8.51:0,9,96	0/1:27,0:22:14.69:15,0,67	1/1:4,10:14:29.89:302,30,0	1/1:7,10:17:18.05:199,18,0	1/1:3,15:18:33.09:365,33,0	1/1:3,6:9:15.04:166,15,0	1/1:3,7:10:27.07:299,27,0	1/1:5,10:16:26.77:241,27,0	1/1:2,10:12:24.06:265,24,0	0/0:14,0:14:35.99:0,36,312	0/1:4,11:15:22.01:235,0,22	1/1:2,17:19:25.09:505,25,0	1/1:3,7:10:24.05:257,24,0	1/1:3,10:13:24.06:265,24,0	0/1:4,18:22:24:444,0,24	0/1:5,15:21:36.10:291,0,36	1/1:7,11:18:7.09:278,7,0	1/1:1,9:10:23.98:237,24,0	1/1:5,14:19:27.07:299,27,0	0/1:1,8:9:5.25:177,0,5	0/0:14,0:13:29.97:0,30,260	0/0:24,0:24:65.98:0,66,572	1/1:5,13:18:18.05:199,18,0	1/1:4,13:17:36.02:364,36,0	1/1:4,17:21:19.07:438,19,0	1/1:1,5:6:18.02:188,18,0
chr10	36815705	.	TGC	T	7826.68	PASS	AB=1.000;AC=41;AF=0.732;AN=56;BaseQRankSum=-8.410;DP=599;FS=0.446;HRun=0;HaplotypeScore=81.6185;InbreedingCoeff=0.3121;MQ=72.91;MQ0=12;MQRankSum=-0.331;QD=16.34;ReadPosRankSum=2.885;VQSLOD=4.9059;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:34,0:34:83.65:670,84,0	0/1:10,0:9:10.45:125,0,10	0/0:22,0:17:17.99:0,18,177	0/0:40,0:20:37.45:0,37,258	1/1:21,0:21:52.13:415,52,0	1/1:17,0:17:34.75:274,35,0	1/1:22,0:22:37.50:406,37,0	1/1:23,0:23:54.05:500,54,0	0/1:22,0:22:18.27:257,0,18	1/1:23,0:23:2.86:443,3,0	1/1:14,0:14:38.81:316,39,0	1/1:23,0:23:37.77:436,38,0	1/1:27,1:28:0.22:413,0,0	0/1:18,0:18:10.86:169,0,11	1/1:19,0:19:6.45:267,6,0	1/1:2,11:13:4.26:45,4,0	0/1:22,0:22:59.40:203,0,59	0/1:16,0:16:42.47:179,0,42	1/1:16,0:15:39.03:357,39,0	1/1:10,0:10:23.88:190,24,0	1/1:22,0:22:56.86:464,57,0	0/1:19,0:19:7.27:231,0,7	0/0:15,0:15:22.82:0,23,231	0/0:43,0:43:27.53:0,28,407	1/1:17,0:17:13.95:319,14,0	1/1:31,0:30:33.61:549,34,0	1/1:18,1:19:10.44:327,10,0	0/1:20,0:18:3.27:274,0,3
chr10	36815710	.	GCT	G	176.26	PASS	AB=1.000;AC=9;AF=0.173;AN=52;BaseQRankSum=-0.491;DP=696;FS=12.040;HRun=0;HaplotypeScore=129.9978;InbreedingCoeff=0.5359;MQ=63.43;MQ0=17;MQRankSum=0.770;QD=1.28;ReadPosRankSum=2.819;VQSLOD=1.7308;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:38,0:38:10.31:59,10,0	0/0:12,0:11:0.21:0,0,131	./.	./.	0/0:22,0:22:5.98:0,6,47	1/1:19,0:19:2.84:17,3,0	0/0:29,0:29:24.42:0,24,210	0/0:29,0:29:11.91:0,12,85	0/0:25,0:25:29.49:0,29,295	0/0:28,0:28:31.18:0,31,325	0/0:17,0:17:2.99:0,3,24	0/0:27,0:27:17.93:0,18,162	0/0:29,0:29:6.73:0,7,225	0/0:25,0:25:20.86:0,21,210	0/0:24,0:24:26.99:0,27,261	0/1:22,0:22:8.73:9,0,103	0/0:32,0:32:53.89:0,54,527	0/0:20,0:20:25.84:0,26,278	0/0:17,0:16:3:0,3,28	0/0:14,0:14:2.66:0,3,25	0/0:33,0:32:17.92:0,18,139	0/0:19,0:19:9.03:0,9,124	1/1:14,3:16:5.25:51,5,0	1/1:24,17:42:17.87:177,18,0	0/0:19,0:18:12.01:0,12,133	0/0:36,0:35:35.58:0,36,316	0/0:26,0:25:8.25:0,8,206	0/0:22,0:18:12.01:0,12,145
chr10	36816526	.	G	GGA	9644.58	PASS	AB=0.704;AC=41;AF=0.732;AN=56;BaseQRankSum=3.634;DP=784;FS=1.821;HRun=0;HaplotypeScore=155.6157;InbreedingCoeff=0.1789;MQ=77.55;MQ0=12;MQRankSum=-1.275;QD=13.45;ReadPosRankSum=4.577;VQSLOD=4.9055;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:13,1:32:15.13:227,0,15	1/1:0,7:9:15.05:241,15,0	0/1:56,0:31:8.36:8,0,256	0/1:90,0:51:46.69:47,0,336	1/1:10,3:27:27.94:439,28,0	1/1:4,1:35:57:523,57,0	1/1:5,1:24:27.01:259,27,0	0/1:16,17:33:99:678,0,140	1/1:0,2:23:41.76:413,42,0	1/1:9,1:32:19.80:496,20,0	1/1:4,1:14:6.01:62,6,0	0/0:25,0:25:66.20:0,66,796	1/1:6,11:17:33.11:529,33,0	1/1:5,15:21:6.09:562,6,0	1/1:6,0:27:47.99:422,48,0	1/1:5,1:29:51:471,51,0	1/1:9,0:30:10.57:265,11,0	1/1:2,1:14:29.18:284,29,0	0/1:13,10:24:63.39:464,0,63	0/1:8,14:24:99:474,0,99	0/1:11,12:23:87.12:466,0,87	0/1:4,20:24:20.78:672,0,21	0/0:19,0:21:47.80:0,48,524	0/0:21,0:21:37.19:0,37,639	0/1:8,14:23:6.09:404,0,6	1/1:6,3:28:27.88:532,28,0	1/1:12,16:29:18.19:426,18,0	1/1:7,1:22:27.02:281,27,0
chr10	36816947	.	C	CG	7674.87	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-13.663;DP=739;FS=6.297;HRun=5;HaplotypeScore=75.5280;InbreedingCoeff=0.9998;MQ=92.10;MQ0=0;MQRankSum=-7.680;QD=32.94;ReadPosRankSum=0.847;VQSLOD=5.3567;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,102,1072	1/1:0,13:13:33.11:434,33,0	0/0:37,0:37:77.15:0,77,872	0/0:25,0:25:57.05:0,57,573	0/0:36,0:36:99:0,102,1065	0/0:27,0:27:75.12:0,75,778	0/0:32,0:32:90.13:0,90,928	1/1:3,30:33:84.22:1046,84,0	0/0:26,0:26:78.16:0,78,825	0/0:34,0:34:93.14:0,93,978	0/0:18,0:18:51.08:0,51,527	0/0:26,0:26:75.15:0,75,792	1/1:2,22:24:60.19:786,60,0	1/1:1,28:29:78.25:1025,78,0	0/0:25,0:25:66.17:0,66,709	0/0:21,0:21:57.14:0,57,612	0/0:41,0:41:99:0,117,1224	0/0:31,0:31:90.23:0,90,966	1/1:1,11:12:33.11:434,33,0	1/1:3,10:13:30.10:392,30,0	1/1:7,29:36:52.03:1034,52,0	1/1:2,27:29:72.23:946,72,0	0/0:20,0:20:54.13:0,54,577	0/0:28,0:28:78.19:0,78,837	1/1:0,18:18:54.18:710,54,0	0/0:28,0:28:72.17:0,72,767	1/1:1,25:24:66.21:868,66,0	0/0:14,0:14:42.04:0,42,437
chr10	36817813	.	ATAT	A	446.28	PASS	AB=0.952;AC=17;AF=0.500;AN=34;BaseQRankSum=4.735;DP=201;FS=1.116;HRun=0;HaplotypeScore=27.0065;InbreedingCoeff=0.5251;MQ=61.08;MQ0=2;MQRankSum=-0.715;QD=5.31;ReadPosRankSum=-0.886;VQSLOD=1.4642;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:8:15.05:0,15,286	1/1:0,3:3:9.03:118,9,0	./.	0/0:2,0:1:0:0,0,0	./.	1/1:3,3:6:3.01:39,3,0	./.	1/1:15,0:12:1.55:4,2,0	0/0:4,0:4:3.01:0,3,39	./.	./.	0/0:5,0:5:9.03:0,9,168	./.	./.	./.	0/0:3,0:3:9.03:0,9,172	0/1:19,1:20:7.17:7,0,450	0/0:15,0:15:12.04:0,12,225	1/1:6,2:8:6.02:78,6,0	1/1:7,1:8:3.01:32,3,0	./.	./.	1/1:3,0:5:2.98:21,3,0	./.	1/1:3,2:5:6.02:78,6,0	0/0:12,0:11:3.01:0,3,57	1/1:9,5:14:15.05:196,15,0	0/0:19,0:19:30.10:0,30,572
chr10	36817899	.	T	TA	1686.78	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-5.682;DP=275;FS=19.368;HRun=8;HaplotypeScore=29.8829;InbreedingCoeff=0.9021;MQ=62.69;MQ0=0;MQRankSum=0.255;QD=25.56;ReadPosRankSum=1.980;VQSLOD=1.8819;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:44.98:0,45,403	0/0:3,0:3:5.99:0,6,52	0/0:10,0:10:15:0,15,137	0/0:4,0:3:6:0,6,55	1/1:0,13:13:39.12:450,39,0	0/0:7,0:7:21.01:0,21,189	0/0:5,0:5:15.01:0,15,137	0/0:32,0:32:87.04:0,87,796	1/1:0,5:5:15.04:173,15,0	0/0:13,0:13:38.99:0,39,348	0/0:10,0:10:27.01:0,27,247	0/0:4,0:4:9:0,9,82	0/0:4,0:4:12.01:0,12,110	0/0:9,0:9:27.01:0,27,247	0/0:13,0:13:33:0,33,299	1/1:1,4:5:12.04:139,12,0	1/1:3,17:20:48.14:554,48,0	0/0:9,0:9:23.97:0,24,211	0/0:16,0:16:36.01:0,36,329	0/0:9,0:9:21:0,21,192	0/0:6,0:6:11.93:0,12,92	0/0:6,0:6:18.01:0,18,165	0/0:8,0:8:21.01:0,21,192	0/0:3,0:3:9:0,9,82	0/0:9,0:9:24.01:0,24,220	1/1:1,6:7:18.05:208,18,0	0/0:13,0:13:39.02:0,39,357	1/1:2,14:16:30.09:346,30,0
chr10	36821133	.	C	CT	10473.93	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-7.747;DP=432;FS=20.796;HRun=8;HaplotypeScore=41.7571;InbreedingCoeff=0.9836;MQ=73.75;MQ0=0;MQRankSum=-2.923;QD=28.38;ReadPosRankSum=0.104;VQSLOD=3.0691;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,21:24:59.85:662,60,0	1/1:0,9:9:27.08:312,27,0	0/0:13,0:12:17.17:0,17,180	0/0:8,0:8:12:0,12,106	1/1:2,22:25:63.10:696,63,0	1/1:2,13:15:33.10:381,33,0	1/1:0,9:7:18.05:208,18,0	1/1:3,27:29:81.22:922,81,0	1/1:0,8:8:24.07:277,24,0	1/1:0,12:12:36.09:406,36,0	1/1:1,12:13:30.09:346,30,0	0/0:12,0:12:27.01:0,27,247	1/1:4,13:17:36.05:389,36,0	1/1:1,17:18:45.13:519,45,0	1/1:0,10:10:27.08:312,27,0	1/1:0,9:9:21.06:242,21,0	1/1:3,18:20:51.15:589,51,0	1/1:5,15:20:50.73:576,51,0	1/1:2,16:18:48.12:537,48,0	1/1:1,17:18:45.13:519,45,0	1/1:2,11:13:33.10:381,33,0	1/1:0,7:7:18.05:207,18,0	0/0:21,0:21:36.01:0,36,330	0/0:9,0:9:24:0,24,215	1/1:3,19:22:45.13:519,45,0	1/1:3,14:17:42.12:485,42,0	1/1:2,20:22:54.16:623,54,0	1/1:1,11:12:33.06:366,33,0
chr10	36822113	.	G	GA	10790.46	PASS	AB=0.633;AC=43;AF=0.860;AN=50;BaseQRankSum=6.784;DP=471;FS=0.000;HRun=0;HaplotypeScore=55.5554;InbreedingCoeff=0.8050;MQ=31.96;MQ0=31;MQRankSum=-10.180;QD=29.16;ReadPosRankSum=-1.864;VQSLOD=4.1226;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:8,11:11:1.01:187,0,1	1/1:0,3:3:9.03:143,9,0	./.	./.	1/1:1,20:16:24.01:352,24,0	1/1:0,22:19:57.19:897,57,0	1/1:3,4:5:3.01:48,3,0	1/1:4,5:3:9.03:144,9,0	1/1:3,23:19:42.08:639,42,0	1/1:2,18:14:39.13:621,39,0	1/1:1,14:13:33.11:525,33,0	0/0:27,0:27:57.19:0,57,792	1/1:0,16:15:42.02:609,42,0	1/1:0,14:13:27.09:430,27,0	1/1:0,29:24:60.20:946,60,0	1/1:2,27:26:54.18:860,54,0	1/1:3,8:8:18.06:286,18,0	1/1:5,4:5:12.04:191,12,0	1/1:0,9:9:27.09:431,27,0	1/1:1,12:11:33.11:523,33,0	./.	1/1:1,15:12:30.03:448,30,0	0/0:21,0:18:36.12:0,36,503	0/0:22,0:19:30.10:0,30,420	1/1:1,10:11:27.09:429,27,0	1/1:2,14:12:36.12:572,36,0	1/1:2,37:28:72.03:1112,72,0	1/1:7,8:13:30.05:398,30,0
chr10	36823914	.	TTCTCTC	T	314.35	PASS	AB=0.935;AC=14;AF=0.292;AN=48;BaseQRankSum=3.499;DP=671;FS=19.317;HRun=0;HaplotypeScore=135.2168;InbreedingCoeff=0.4774;MQ=70.84;MQ0=18;MQRankSum=-1.028;QD=1.83;ReadPosRankSum=1.208;VQSLOD=1.6651;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:43:31.64:0,32,463	0/1:9,0:9:0:0,0,0	./.	./.	1/1:28,0:29:0.89:2,1,0	1/1:15,0:15:3.72:22,4,0	1/1:20,0:19:3:31,3,0	0/0:39,0:39:19.62:0,20,305	0/0:22,0:22:24.07:0,24,448	0/0:22,0:23:10.58:0,11,140	./.	1/1:26,3:30:12.04:198,12,0	0/0:15,0:15:6.49:0,6,154	0/0:18,0:17:0.41:0,0,1	0/0:28,0:28:9.50:0,10,268	0/1:23,1:27:50.91:51,0,71	0/0:12,0:12:6.02:0,6,80	0/0:20,0:21:9.01:0,9,117	0/0:20,0:17:6.01:0,6,110	0/0:16,0:16:3.01:0,3,78	0/0:31,0:30:15.05:0,15,374	0/0:27,0:26:2.70:0,3,77	1/1:14,0:18:5.75:84,6,0	1/1:17,4:21:3:60,3,0	0/0:31,0:31:6.02:0,6,158	0/0:19,0:18:3.01:0,3,68	0/0:30,0:29:14.53:0,15,264	./.
chr10	36825093	.	C	CT	2855.53	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-9.633;DP=596;FS=3.188;HRun=8;HaplotypeScore=64.7423;InbreedingCoeff=0.9897;MQ=59.80;MQ0=5;MQRankSum=0.388;QD=22.31;ReadPosRankSum=0.915;VQSLOD=4.2622;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:39:87.04:0,87,796	0/0:12,0:12:32.70:0,33,301	0/0:13,0:9:21.86:0,22,185	0/0:14,0:8:18.01:0,18,164	1/1:4,25:29:63.19:727,63,0	0/0:21,0:20:45.02:0,45,412	0/0:21,0:21:51.02:0,51,467	0/0:31,0:31:43.97:0,44,600	1/1:2,13:15:33.10:381,33,0	0/0:22,0:22:55.58:0,56,498	0/0:22,0:22:54.02:0,54,493	0/0:19,0:19:48.03:0,48,439	0/0:16,0:16:39.02:0,39,357	0/0:14,0:14:32.91:0,33,302	0/0:19,0:18:48.03:0,48,439	1/1:3,14:17:11.64:374,12,0	1/1:7,25:29:54.27:653,54,0	0/0:29,0:28:61.76:0,62,558	0/0:21,0:21:47.17:0,47,421	0/0:23,0:23:60.03:0,60,549	0/0:14,0:14:39.02:0,39,356	0/0:27,0:26:63.02:0,63,577	0/0:15,0:15:33.49:0,33,303	0/0:27,0:25:63.03:0,63,576	0/0:24,0:23:59.97:0,60,549	1/1:5,18:23:60.10:664,60,0	0/0:24,0:24:65.88:0,66,600	1/1:2,9:11:21.06:242,21,0
chr10	36825843	.	GATATAGATAT	G	4351.98	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=-0.112;DP=493;FS=0.000;HRun=0;HaplotypeScore=165.3759;InbreedingCoeff=0.8283;MQ=64.97;MQ0=9;MQRankSum=-3.882;QD=35.97;ReadPosRankSum=2.003;VQSLOD=4.4130;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:62.49:0,62,1425	0/0:2,0:2:5.88:0,6,36	0/1:8,0:6:12.08:12,0,97	0/0:7,0:6:3.93:0,4,50	1/1:0,18:18:9.03:303,9,0	0/0:23,0:23:57.14:0,57,2128	0/0:25,0:25:71.94:0,72,1253	0/0:38,0:26:71.52:0,72,840	1/1:1,14:15:21.07:709,21,0	0/0:17,0:17:51.09:0,51,1259	0/0:17,0:17:51.17:0,51,1416	0/0:13,0:13:39.12:0,39,1242	0/0:16,0:16:23.80:0,24,266	0/0:17,0:16:23.69:0,24,260	0/0:14,0:14:32.96:0,33,712	1/1:0,11:11:15.05:507,15,0	1/1:1,17:18:14.08:411,14,0	0/0:14,0:14:41.97:0,42,815	0/0:17,0:14:38.82:0,39,374	0/0:20,0:20:32.85:0,33,394	0/0:23,0:23:59.86:0,60,804	0/0:9,0:9:26.81:0,27,348	0/0:7,0:7:18.06:0,18,596	0/0:14,0:14:39.08:0,39,989	0/0:17,0:17:11.78:0,12,93	1/1:2,30:31:44.74:1902,45,0	0/0:36,0:35:68.58:0,69,885	1/1:3,16:16:15.05:507,15,0
chr10	36826029	.	T	TG	641.96	PASS	AB=0.873;AC=13;AF=0.232;AN=56;BaseQRankSum=5.778;DP=415;FS=1.933;HRun=0;HaplotypeScore=71.3712;InbreedingCoeff=0.3396;MQ=73.14;MQ0=14;MQRankSum=-2.705;QD=4.52;ReadPosRankSum=-0.673;VQSLOD=3.0112;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:10,7:17:11.92:188,0,12	0/0:5,0:5:11.49:0,11,61	0/0:55,0:17:31.36:0,31,359	0/0:22,0:11:2.37:0,2,106	0/0:21,0:21:62.96:0,63,785	1/1:4,12:16:3.26:111,3,0	0/1:4,2:6:4.97:51,0,5	0/0:12,0:12:17.96:0,18,96	0/0:8,0:8:13.57:0,14,243	0/1:19,2:22:1.94:2,0,85	0/1:9,2:11:22.36:44,0,22	0/0:9,0:9:27.08:0,27,362	0/0:4,0:4:11.25:0,11,58	0/1:7,0:6:2.45:2,0,59	1/1:6,4:10:12.89:154,13,0	0/0:9,0:9:24.04:0,24,334	0/0:31,0:30:74.41:0,74,943	1/1:8,16:25:20.73:231,21,0	0/0:9,0:9:19.63:0,20,135	0/0:8,0:8:22.43:0,22,119	0/1:15,0:15:4.90:5,0,97	0/0:8,0:8:18.96:0,19,89	0/0:11,0:11:33.10:0,33,445	0/0:14,0:14:42.08:0,42,525	0/1:12,1:13:1.90:2,0,103	0/0:13,0:13:36.03:0,36,474	0/0:18,0:18:38.25:0,38,202	0/0:16,0:15:42.10:0,42,520
chr10	36826140	.	GT	G	4603.60	PASS	AB=1.000;AC=33;AF=0.589;AN=56;BaseQRankSum=10.166;DP=413;FS=4.822;HRun=5;HaplotypeScore=53.8999;InbreedingCoeff=0.9152;MQ=69.10;MQ0=1;MQRankSum=0.285;QD=20.10;ReadPosRankSum=0.891;VQSLOD=4.1538;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:96.14:0,96,1251	1/1:0,8:8:18.05:201,18,0	0/0:17,0:15:25.53:0,26,267	0/1:7,0:4:5.40:5,0,16	1/1:14,0:13:32.08:164,32,0	0/0:21,0:21:63.18:0,63,809	0/0:15,0:15:42.12:0,42,542	1/1:2,22:24:66.17:737,66,0	1/1:10,0:10:25.45:136,25,0	0/0:18,0:18:51.13:0,51,671	0/0:16,0:16:38.81:0,39,474	0/0:12,0:12:22.70:0,23,347	1/1:0,12:12:24.07:271,24,0	1/1:0,11:11:30.09:339,30,0	0/0:7,0:7:18.06:0,18,246	1/1:9,0:9:8.32:59,8,0	1/1:22,0:20:51.54:220,52,0	0/0:20,0:20:45.09:0,45,589	1/1:1,14:15:42.12:474,42,0	1/1:0,19:19:56.96:607,57,0	1/1:0,10:10:24.07:268,24,0	1/1:0,8:8:20.98:209,21,0	0/0:7,0:7:18.93:0,19,219	0/0:17,0:17:51.11:0,51,656	1/1:2,5:7:12.03:136,12,0	1/1:20,0:20:37.67:221,38,0	1/1:0,22:22:42.12:473,42,0	1/1:11,0:11:8.06:82,8,0
chr10	36826144	.	T	TA	1373.77	PASS	AB=0.821;AC=12;AF=0.214;AN=56;BaseQRankSum=2.756;DP=417;FS=12.952;HRun=0;HaplotypeScore=65.3565;InbreedingCoeff=0.6471;MQ=72.22;MQ0=1;MQRankSum=-0.463;QD=13.47;ReadPosRankSum=1.748;VQSLOD=4.1747;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,102,1373	0/0:8,0:8:15.66:0,16,62	0/0:19,0:17:30.41:0,30,384	0/1:7,0:4:15.87:28,0,16	1/1:2,13:14:23.84:244,24,0	0/0:22,0:22:66.20:0,66,888	0/0:15,0:15:45.13:0,45,609	0/0:22,0:22:54.89:0,55,212	1/1:3,7:10:17.65:197,18,0	0/0:18,0:18:54.12:0,54,716	0/0:15,0:15:42.12:0,42,562	0/0:11,0:11:33.10:0,33,440	0/0:13,0:13:20.77:0,21,81	0/0:11,0:11:25.96:0,26,101	0/0:8,0:8:24.02:0,24,296	0/1:4,2:8:2.05:69,0,2	1/1:0,23:21:57.08:548,57,0	0/0:17,0:17:45.15:0,45,624	0/0:16,0:16:42.43:0,42,194	0/0:20,0:20:50.20:0,50,204	0/0:11,0:11:23.55:0,24,105	0/1:8,0:8:3.83:4,0,35	0/0:7,0:7:21.07:0,21,291	0/0:17,0:17:51.16:0,51,694	0/0:5,0:5:10.39:0,10,40	1/1:5,11:18:30.33:276,30,0	0/0:25,0:25:41.77:0,42,185	0/1:5,7:13:11.25:181,0,11
chr10	36826526	.	CTTTT	C	8129.30	PASS	AB=0.850;AC=36;AF=0.643;AN=56;BaseQRankSum=3.905;DP=461;FS=0.424;HRun=15;HaplotypeScore=123.3271;InbreedingCoeff=0.8014;MQ=66.97;MQ0=1;MQRankSum=-8.634;QD=26.92;ReadPosRankSum=3.562;VQSLOD=3.7205;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,16:26:49.21:655,49,0	1/1:2,11:13:33.08:450,33,0	0/0:33,0:14:10.28:0,10,151	0/0:20,0:12:5.91:0,6,210	0/0:6,0:23:59.98:0,60,760	1/1:3,13:17:37.20:494,37,0	1/1:5,6:12:30.04:373,30,0	1/1:13,22:35:62.61:893,63,0	0/0:3,0:11:29.90:0,30,317	1/1:6,10:16:26.95:368,27,0	1/1:5,16:22:45.01:612,45,0	0/0:11,0:12:24.08:0,24,486	1/1:2,15:18:51.12:675,51,0	1/1:3,6:9:24.02:305,24,0	1/1:1,10:11:33.11:449,33,0	0/0:2,0:14:39.12:0,39,491	0/0:12,0:23:50.94:0,51,643	1/1:4,9:13:24.03:327,24,0	1/1:6,10:16:36.08:490,36,0	1/1:7,15:22:26.18:611,26,0	1/1:2,3:5:2.89:41,3,0	1/1:0,5:5:12.01:163,12,0	0/0:12,0:12:30.10:0,30,544	0/1:6,0:6:10.59:11,0,256	1/1:2,14:17:45.09:596,45,0	0/1:12,1:21:11.73:12,0,355	1/1:3,14:18:45.09:606,45,0	0/0:4,0:11:30.01:0,30,416
chr10	36826545	.	TAA	T	8075.66	PASS	AB=0.778;AC=36;AF=0.643;AN=56;BaseQRankSum=4.132;DP=490;FS=3.573;HRun=10;HaplotypeScore=124.5349;InbreedingCoeff=0.8742;MQ=68.36;MQ0=2;MQRankSum=-8.681;QD=25.80;ReadPosRankSum=2.034;VQSLOD=4.3029;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,19:22:57.14:630,57,0	1/1:1,11:12:33.09:368,33,0	0/0:44,0:19:18.18:0,18,167	0/0:25,0:13:26.77:0,27,264	0/0:8,0:28:63.44:0,63,254	1/1:0,17:17:45.12:501,45,0	1/1:2,9:11:30.07:333,30,0	1/1:9,25:34:61.19:819,61,0	0/0:2,0:12:22.15:0,22,77	1/1:5,8:13:24.04:267,24,0	1/1:3,19:22:57.14:634,57,0	0/0:11,0:11:33.10:0,33,500	1/1:5,21:26:69.13:748,69,0	1/1:1,12:13:36.10:401,36,0	1/1:1,15:16:45.12:501,45,0	0/0:3,0:14:23.67:0,24,84	0/0:8,0:21:43.42:0,43,185	1/1:4,10:14:33.07:366,33,0	1/1:2,16:18:45.12:501,45,0	1/1:5,13:18:42.09:460,42,0	1/1:2,5:7:9:100,9,0	1/1:0,6:6:18.05:200,18,0	0/0:8,0:8:18.04:0,18,243	0/1:8,0:8:1.54:2,0,265	1/1:2,19:21:57.15:634,57,0	0/1:3,1:15:8.33:8,0,45	1/1:3,17:20:54.04:600,54,0	0/0:2,0:13:26.34:0,26,104
chr10	36826554	.	AAC	A	2904.28	PASS	AB=0.994;AC=27;AF=0.482;AN=56;BaseQRankSum=11.125;DP=483;FS=4.374;HRun=0;HaplotypeScore=134.0794;InbreedingCoeff=0.4579;MQ=67.51;MQ0=2;MQRankSum=-9.965;QD=10.23;ReadPosRankSum=6.656;VQSLOD=3.0279;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:22:13.24:238,13,0	0/1:14,0:14:32.84:138,0,33	0/0:44,0:20:33.85:0,34,285	0/0:23,0:12:26.07:0,26,256	0/0:28,0:28:54.89:0,55,331	1/1:19,0:19:0.93:179,1,0	1/1:9,1:10:26.89:146,27,0	1/1:27,0:27:41.07:276,41,0	0/0:13,0:13:37.32:0,37,213	0/1:12,0:12:41.58:66,0,42	1/1:20,0:20:32.02:296,32,0	0/0:14,0:14:39.09:0,39,547	1/1:25,1:26:20.08:313,20,0	0/1:14,0:14:9:130,0,9	1/1:15,0:15:40.95:201,41,0	0/0:14,0:13:26.38:0,26,161	0/0:19,0:19:47.47:0,47,248	1/1:11,1:12:13.66:148,14,0	0/1:18,0:18:10.26:141,0,10	1/1:14,1:15:24.73:257,25,0	0/1:9,0:9:19.27:19,0,69	0/1:8,0:8:24.67:80,0,25	0/0:8,0:8:18.03:0,18,267	0/0:8,0:8:21.94:0,22,319	1/1:21,0:21:9.51:239,10,0	0/0:15,0:15:7.24:0,7,180	0/1:21,1:22:12.82:239,0,13	0/0:13,0:13:26.42:0,26,125
chr10	36827083	.	T	TG	2184.56	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-2.908;DP=547;FS=2.309;HRun=6;HaplotypeScore=146.7992;InbreedingCoeff=0.9512;MQ=75.10;MQ0=0;MQRankSum=5.387;QD=22.76;ReadPosRankSum=3.353;VQSLOD=1.9014;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:57.07:0,57,563	0/0:7,0:7:14.97:0,15,141	0/0:23,0:23:36.78:0,37,545	0/0:27,0:25:56.63:0,57,513	1/1:3,10:13:24.08:297,24,0	0/0:19,0:19:51.11:0,51,519	0/0:31,0:31:69.15:0,69,704	0/0:24,0:24:42.06:0,42,420	1/1:1,14:15:36.12:453,36,0	0/0:16,0:16:39.09:0,39,397	0/0:12,0:12:24.05:0,24,244	0/0:22,0:22:60.14:0,60,612	0/0:29,0:29:75.17:0,75,764	0/0:26,0:26:57.11:0,57,580	0/0:22,0:22:57.12:0,57,580	1/1:0,19:19:42.13:528,42,0	1/1:2,22:24:48.12:587,48,0	0/0:14,0:14:27.05:0,27,275	0/0:12,0:12:30.07:0,30,306	0/0:9,0:9:22.26:0,22,202	0/0:38,0:38:73.18:0,73,730	0/0:19,0:19:28.25:0,28,354	0/0:24,0:24:60.13:0,60,611	0/0:10,0:10:30.07:0,30,305	0/0:20,0:20:51.11:0,51,519	1/1:5,14:19:11.52:460,12,0	0/0:20,0:20:38.62:0,39,396	1/1:1,5:6:3.01:38,3,0
chr10	36827108	.	C	CTGACACCTGTGTGAG	31566.80	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-6.037;DP=552;FS=7.553;HRun=0;HaplotypeScore=200.4322;InbreedingCoeff=0.9582;MQ=77.21;MQ0=0;MQRankSum=-14.675;QD=84.40;ReadPosRankSum=3.133;VQSLOD=3.6776;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,5:36:21.07:1481,21,0	1/1:2,3:5:12.04:870,12,0	0/0:24,0:24:53.20:0,53,1524	0/0:25,0:22:54.11:0,54,1733	0/0:11,0:11:33.10:0,33,1142	1/1:7,6:16:27.09:1934,27,0	1/1:14,2:33:30.10:1898,30,0	1/1:31,0:31:78.07:3459,78,0	0/0:13,0:13:30.09:0,30,1108	1/1:5,5:24:56.80:2496,57,0	1/1:5,3:14:12.04:852,12,0	0/0:16,0:16:45.15:0,45,1787	1/1:18,10:33:60.21:3968,60,0	1/1:12,8:26:42.14:3022,42,0	1/1:11,10:31:36.12:2547,36,0	0/0:16,0:16:48.16:0,48,1729	0/0:22,0:22:48.13:0,48,1692	1/1:6,2:13:15.05:859,15,0	1/1:15,0:15:36.09:1094,36,0	1/1:3,1:8:12.04:865,12,0	1/1:11,2:24:9.03:648,9,0	1/1:7,5:20:24.08:1660,24,0	0/0:21,0:21:57.18:0,57,2166	0/0:8,0:8:21.05:0,21,791	1/1:7,8:21:36.12:2609,36,0	0/0:19,0:19:42.14:0,42,1644	1/1:9,6:24:17.48:1304,17,0	0/0:3,0:3:6.02:0,6,214
chr10	36828486	.	CTGCG	C	27062.36	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=10.678;DP=718;FS=6.202;HRun=0;HaplotypeScore=133.6147;InbreedingCoeff=0.9925;MQ=84.97;MQ0=6;MQRankSum=-8.572;QD=45.41;ReadPosRankSum=2.565;VQSLOD=5.3048;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,39:39:99:2030,111,0	1/1:0,11:11:27.09:497,27,0	0/0:31,0:31:81.26:0,81,1959	0/0:23,0:23:51.17:0,51,1217	1/1:2,31:33:87.30:1579,87,0	1/1:3,20:22:51.17:932,51,0	1/1:2,22:24:60.21:1099,60,0	1/1:5,27:32:81.28:1459,81,0	1/1:2,24:26:72.25:1324,72,0	1/1:1,24:25:72.25:1325,72,0	1/1:4,14:17:30.10:552,30,0	0/0:24,0:24:66.23:0,66,1729	1/1:2,20:22:54.19:989,54,0	1/1:3,26:28:63.22:1149,63,0	1/1:5,24:28:63.22:1152,63,0	1/1:1,22:23:66.23:1205,66,0	1/1:1,35:35:93.32:1702,93,0	1/1:3,24:27:54.19:993,54,0	1/1:6,15:20:45.15:817,45,0	1/1:4,14:18:42.14:766,42,0	1/1:3,46:48:99:2250,123,0	1/1:3,21:23:60.21:1094,60,0	0/0:17,0:17:39.12:0,39,975	0/0:27,0:27:81.28:0,81,2124	1/1:2,15:17:42.14:770,42,0	1/1:3,38:41:99:2055,114,0	1/1:4,21:25:60.21:1103,60,0	1/1:0,4:4:12.04:221,12,0
chr10	36829093	.	A	AG	5319.73	PASS	AB=0.923;AC=33;AF=0.589;AN=56;BaseQRankSum=17.555;DP=619;FS=11.330;HRun=3;HaplotypeScore=85.0579;InbreedingCoeff=0.8953;MQ=87.48;MQ0=0;MQRankSum=-3.214;QD=13.71;ReadPosRankSum=3.668;VQSLOD=2.9765;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:32,0:32:80.06:460,80,0	1/1:13,0:13:37.72:218,38,0	0/0:30,0:30:80.78:0,81,917	0/0:13,0:13:36.07:0,36,416	0/0:24,0:24:72.18:0,72,849	1/1:25,0:25:34.07:284,34,0	1/1:20,0:20:1.38:189,1,0	1/1:29,0:29:75.46:384,75,0	0/0:19,0:19:51.15:0,51,618	1/1:20,0:20:51.76:255,52,0	1/1:24,2:26:24.43:338,24,0	0/0:25,0:25:69.21:0,69,845	1/1:17,0:17:42.90:227,43,0	1/1:28,0:28:67.04:372,67,0	1/1:18,1:19:49.07:292,49,0	0/0:16,0:16:45.14:0,45,557	0/0:28,0:28:84.18:0,84,974	1/1:29,0:29:51.45:356,51,0	0/1:11,1:12:23.74:127,0,24	1/1:17,2:19:55.39:399,55,0	1/1:26,0:26:69:372,69,0	1/1:22,1:23:24.49:356,24,0	0/0:15,0:15:45.13:0,45,547	0/0:22,0:22:66.18:0,66,802	1/1:21,0:21:30.06:272,30,0	0/0:27,0:27:52.81:0,53,886	1/1:29,0:29:52.03:418,52,0	0/0:12,0:12:36.11:0,36,446
chr10	36829095	.	G	GT	14107.84	PASS	AB=0.931;AC=35;AF=0.625;AN=56;BaseQRankSum=-14.816;DP=641;FS=8.578;HRun=4;HaplotypeScore=59.3615;InbreedingCoeff=0.9460;MQ=86.25;MQ0=0;MQRankSum=-2.589;QD=32.66;ReadPosRankSum=1.734;VQSLOD=5.2608;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,30:35:87.27:1171,87,0	1/1:1,13:14:39.13:533,39,0	0/0:29,0:29:78.19:0,78,862	0/0:13,0:13:27.08:0,27,306	0/0:24,0:24:66.19:0,66,746	1/1:2,22:24:60.20:820,60,0	1/1:2,19:21:48.16:656,48,0	1/1:0,28:29:87.26:1151,87,0	0/0:17,0:17:48.12:0,48,534	1/1:0,20:20:60.19:804,60,0	1/1:4,25:29:69.19:920,69,0	0/0:25,0:25:69.19:0,69,775	1/1:1,17:18:45.15:615,45,0	1/1:1,27:28:72.20:963,72,0	1/1:2,19:21:51.17:689,51,0	0/0:18,0:18:51.08:0,51,539	0/0:30,0:30:72.18:0,72,804	1/1:1,29:30:72.24:985,72,0	1/1:4,8:12:30.09:392,30,0	1/1:2,16:19:57.19:765,57,0	1/1:0,26:26:72.24:983,72,0	1/1:3,21:24:63.21:859,63,0	0/0:17,0:17:45.11:0,45,499	0/0:24,0:24:69.15:0,69,751	1/1:3,20:23:57.19:779,57,0	0/1:25,2:27:3.86:4,0,739	1/1:4,28:32:75.25:1018,75,0	0/0:12,0:12:36.09:0,36,399
chr10	36829644	.	C	CT	4199.99	PASS	AB=0.615;AC=23;AF=0.411;AN=56;BaseQRankSum=-5.277;DP=609;FS=0.784;HRun=11;HaplotypeScore=74.0422;InbreedingCoeff=0.6971;MQ=67.81;MQ0=5;MQRankSum=-0.427;QD=13.42;ReadPosRankSum=1.772;VQSLOD=3.9441;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:13,35:50:22.56:551,0,23	0/0:12,0:15:30.91:0,31,216	0/0:16,0:8:8.29:0,8,66	0/0:20,0:15:4.79:0,5,81	1/1:10,21:32:19.65:350,20,0	1/1:2,13:15:24.05:244,24,0	1/1:5,14:19:3.82:220,4,0	0/0:38,0:36:59.59:0,60,465	1/1:9,5:18:17.87:167,18,0	1/1:5,13:20:41.31:358,41,0	1/1:5,11:16:9.75:244,10,0	0/0:17,0:18:20.17:0,20,241	0/0:8,0:9:19.96:0,20,145	0/0:17,1:20:15.14:0,15,234	1/1:5,24:29:10.30:282,10,0	0/1:8,6:14:31.44:76,0,31	1/1:13,19:32:25.42:627,25,0	1/1:9,19:28:60.77:627,61,0	0/0:28,0:29:76.73:0,77,584	0/0:16,0:17:25.89:0,26,186	0/0:16,1:17:16.40:0,16,297	0/0:9,0:10:16.93:0,17,118	0/0:21,0:21:26.38:0,26,384	0/0:25,0:26:64.72:0,65,488	0/0:20,0:20:47.63:0,48,365	1/1:10,18:27:6.41:391,6,0	0/0:18,0:18:26.04:0,26,329	0/1:3,8:11:11.38:63,0,11
chr10	36831505	.	G	GCTCT	806.14	PASS	AB=1.000;AC=14;AF=0.259;AN=54;BaseQRankSum=3.521;DP=721;FS=0.896;HRun=0;HaplotypeScore=131.7825;InbreedingCoeff=0.6371;MQ=61.75;MQ0=29;MQRankSum=-0.676;QD=3.91;ReadPosRankSum=-2.636;VQSLOD=1.7792;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:27,14:39:1.77:5,2,0	0/0:13,0:13:14.79:0,15,174	./.	0/0:81,0:28:0.47:0,0,1	0/0:22,0:22:18.03:0,18,236	1/1:20,0:20:5.85:59,6,0	1/1:29,0:26:9.03:150,9,0	0/0:32,0:32:4.75:0,5,68	0/0:24,0:24:30.08:0,30,417	1/1:29,0:28:20.76:268,21,0	1/1:17,0:17:3.01:49,3,0	0/0:22,0:21:33.11:0,33,471	0/0:17,0:16:30.08:0,30,366	0/0:26,0:26:19.59:0,20,478	0/1:20,0:18:29.23:185,0,29	0/0:20,0:20:27.04:0,27,352	0/0:20,0:21:27.13:0,27,317	1/1:23,0:21:19.40:246,19,0	0/0:14,0:14:7.57:0,8,78	0/0:24,0:24:12.04:0,12,155	0/0:32,0:31:45.12:0,45,534	0/0:21,0:19:33.09:0,33,403	0/0:21,0:21:27.09:0,27,379	0/0:22,0:23:9.48:0,9,376	0/0:14,0:14:18.05:0,18,219	0/1:27,0:27:4.57:5,0,239	0/0:22,0:23:23.93:0,24,278	0/0:7,0:7:15.05:0,15,199
chr10	36831542	.	C	CTG	658.54	PASS	AB=0.996;AC=14;AF=0.259;AN=54;BaseQRankSum=3.551;DP=595;FS=3.238;HRun=0;HaplotypeScore=122.9099;InbreedingCoeff=-0.1874;MQ=47.99;MQ0=31;MQRankSum=1.955;QD=2.38;ReadPosRankSum=-0.276;VQSLOD=2.5786;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:32:31.48:0,31,211	0/1:14,0:14:32.92:48,0,33	./.	0/0:17,0:3:5.94:0,6,41	0/0:12,0:17:16.58:0,17,200	0/0:13,0:13:20.23:0,20,139	0/0:26,0:20:8.79:0,9,69	0/0:22,0:21:3.84:0,4,171	0/1:26,0:26:99:101,0,281	0/0:22,0:21:37.86:0,38,297	0/0:12,0:12:5.84:0,6,36	0/0:28,0:27:61.08:0,61,608	1/1:27,0:24:17.50:195,18,0	0/1:27,0:27:79.72:80,0,241	0/0:22,0:20:32.77:0,33,259	0/1:17,0:17:54.65:55,0,345	0/1:19,0:19:35.94:36,0,153	0/0:26,0:24:29.38:0,29,191	0/1:20,0:19:24.21:24,0,169	0/0:12,9:20:6.88:0,7,31	0/1:37,0:35:38.63:78,0,39	0/1:20,1:19:30.48:48,0,30	0/0:18,0:18:35.78:0,36,420	0/0:33,0:31:54.33:0,54,528	0/1:18,0:17:12.88:13,0,37	0/1:24,0:23:84.85:85,0,193	0/1:18,0:18:20.32:47,0,20	0/1:9,0:8:4.06:4,0,127
chr10	36831544	.	CTGTGTG	C	2207.79	PASS	AB=0.963;AC=13;AF=0.250;AN=52;BaseQRankSum=-4.486;DP=602;FS=65.176;HRun=0;HaplotypeScore=152.1395;InbreedingCoeff=0.8278;MQ=47.78;MQ0=28;MQRankSum=3.877;QD=14.43;ReadPosRankSum=-2.115;VQSLOD=0.3878;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:31,0:29:25.97:371,26,0	0/0:15,0:15:22.82:0,23,511	./.	./.	0/0:18,0:18:12.02:0,12,187	1/1:12,0:13:19.81:371,20,0	1/1:23,2:20:8.77:144,9,0	0/0:24,0:22:33.08:0,33,507	0/0:26,0:26:29.64:0,30,642	1/1:18,3:20:11.18:519,11,0	1/1:10,2:12:5.86:114,6,0	0/0:29,0:28:46.46:0,46,982	0/0:27,0:25:51.57:0,52,1068	0/0:27,0:27:27.55:0,28,502	1/1:21,0:21:15.48:494,15,0	0/0:18,0:18:17.94:0,18,362	0/0:21,0:21:26.99:0,27,410	0/1:25,0:24:9.06:369,0,9	0/0:21,0:20:21:0,21,314	0/0:21,0:20:9.03:0,9,174	0/0:39,0:35:41.32:0,41,922	0/0:23,0:21:24.07:0,24,514	0/0:19,0:19:21.06:0,21,464	0/0:34,0:32:39.10:0,39,859	0/0:20,0:19:15.52:0,16,368	0/0:26,0:25:43.38:0,43,814	0/0:19,0:19:24.86:0,25,463	0/0:9,0:8:9.03:0,9,148
chr10	36831959	.	T	TA	1628.83	PASS	AB=0.721;AC=28;AF=0.500;AN=56;BaseQRankSum=4.849;DP=616;FS=5.680;HRun=15;HaplotypeScore=124.2918;InbreedingCoeff=0.3921;MQ=73.23;MQ0=3;MQRankSum=-5.462;QD=4.12;ReadPosRankSum=-3.631;VQSLOD=0.5215;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:26:0,26,158	0/1:4,9:13:8.09:105,0,8	0/1:44,0:33:26.94:27,0,54	0/0:22,0:12:3.75:0,4,34	1/1:27,0:27:44.50:179,44,0	0/0:14,0:14:24.32:0,24,137	0/0:20,0:24:23.63:0,24,133	1/1:25,5:29:19.44:142,19,0	1/1:17,0:17:18.14:70,18,0	0/0:24,0:27:47.09:0,47,268	0/0:19,1:20:3.14:0,3,120	0/0:21,0:21:17.27:0,17,106	0/1:7,16:24:16.03:189,0,16	0/1:15,12:27:10.93:127,0,11	0/1:15,1:19:12.73:13,0,92	1/1:16,0:16:14.91:42,15,0	1/1:15,0:14:17.97:73,18,0	0/0:23,1:25:23.36:0,23,227	1/1:10,9:20:27.47:197,27,0	1/1:8,6:18:17.63:123,18,0	1/1:9,10:20:8.62:95,9,0	0/1:8,8:16:9.10:33,0,9	0/0:27,0:27:34.01:0,34,202	0/0:18,1:19:15.95:0,16,208	0/1:13,12:25:32.05:101,0,32	1/1:23,0:21:37.08:146,37,0	0/1:8,14:23:30.04:96,0,30	1/1:17,0:17:21.13:71,21,0
chr10	36831974	.	AGGC	A	1084.43	PASS	AB=0.798;AC=7;AF=0.125;AN=56;BaseQRankSum=3.331;DP=605;FS=29.378;HRun=0;HaplotypeScore=90.6296;InbreedingCoeff=-0.1412;MQ=68.41;MQ0=3;MQRankSum=-5.701;QD=7.18;ReadPosRankSum=-0.829;VQSLOD=0.8034;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:22:56.86:0,57,975	0/0:14,0:14:35.98:0,36,570	0/0:36,0:23:37.10:0,37,726	0/1:18,0:8:10.79:11,0,261	0/1:18,13:31:99:427,0,762	0/0:15,0:15:42.13:0,42,808	0/0:23,0:23:57.16:0,57,1075	0/0:26,0:25:65.72:0,66,1143	0/1:13,8:21:99:167,0,590	0/0:27,0:27:78.07:0,78,1378	0/0:18,0:18:50.38:0,50,887	0/0:17,0:17:51.16:0,51,934	0/0:25,0:25:51.01:0,51,747	0/0:21,0:21:41.94:0,42,678	0/0:23,0:23:68.97:0,69,1170	0/1:12,6:18:78.59:79,0,476	0/1:14,3:16:99:204,0,513	0/0:28,0:28:75.24:0,75,1327	0/0:21,0:22:50.43:0,50,977	0/0:15,0:15:39.01:0,39,646	0/0:16,0:16:24.04:0,24,406	0/0:15,0:15:38.40:0,38,660	0/0:23,0:23:69.22:0,69,1278	0/0:18,0:18:54.18:0,54,954	0/0:27,0:27:56.99:0,57,918	0/1:20,5:23:99:156,0,741	0/0:22,0:22:33.09:0,33,524	0/1:13,8:21:99:171,0,547
chr10	36832883	.	T	TA	7432.56	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=2.131;DP=729;FS=6.261;HRun=9;HaplotypeScore=92.3472;InbreedingCoeff=0.9602;MQ=76.61;MQ0=0;MQRankSum=-1.528;QD=17.01;ReadPosRankSum=-0.145;VQSLOD=4.6523;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,0:48:88.68:448,89,0	1/1:4,9:13:0.87:239,1,0	0/0:17,0:17:41.91:0,42,348	0/0:15,0:14:19.26:0,19,173	0/0:35,0:36:98.01:0,98,839	1/1:3,0:22:48.84:247,49,0	1/1:4,0:21:34.33:174,34,0	1/1:7,22:29:57.15:630,57,0	0/0:31,0:31:74.95:0,75,647	1/1:3,2:43:79.21:442,79,0	1/1:6,1:29:57.22:294,57,0	0/0:27,0:27:74.97:0,75,651	1/1:1,14:15:16.06:405,16,0	1/1:3,21:24:34.08:594,34,0	1/1:2,0:19:37.27:188,37,0	0/0:33,0:34:72.33:0,72,715	0/0:31,0:31:86.97:0,87,755	1/1:2,0:21:33.57:166,34,0	1/1:7,20:28:39.91:630,40,0	1/1:11,21:32:75.64:805,76,0	1/1:6,15:21:13.03:363,13,0	1/1:4,13:17:40.35:434,40,0	0/0:23,0:23:35.92:0,36,540	0/0:29,0:29:68.96:0,69,599	1/1:1,17:18:42.11:465,42,0	0/0:33,0:36:48.57:0,49,751	1/1:5,32:35:41.14:910,41,0	0/0:13,0:13:32.97:0,33,286
chr10	36834476	.	T	TA	2416.21	PASS	AB=0.950;AC=15;AF=0.268;AN=56;BaseQRankSum=0.447;DP=552;FS=6.243;HRun=3;HaplotypeScore=70.1993;InbreedingCoeff=0.9426;MQ=69.75;MQ0=5;MQRankSum=-1.719;QD=12.72;ReadPosRankSum=0.498;VQSLOD=1.8822;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:52,1:53:99:870,122,0	0/0:14,0:14:29.55:0,30,196	0/1:18,0:7:0.82:25,0,1	0/0:13,0:11:15.85:0,16,147	0/0:31,0:31:50.78:0,51,331	1/1:26,1:27:60.41:426,60,0	1/1:20,0:20:38.99:245,39,0	0/0:27,0:27:55.60:0,56,434	0/0:9,0:9:14.89:0,15,101	1/1:15,1:16:39.76:308,40,0	1/1:14,0:14:26.44:189,26,0	0/0:21,0:22:49.33:0,49,392	0/0:16,0:16:35.82:0,36,277	0/0:17,0:17:35.82:0,36,280	1/1:18,0:18:39.46:243,39,0	0/0:21,0:20:32.17:0,32,176	0/0:26,0:26:25.28:0,25,185	1/1:23,0:23:55.36:311,55,0	0/0:11,0:10:22.45:0,22,170	0/0:17,0:16:41.72:0,42,325	0/0:11,0:11:23.70:0,24,166	0/0:18,0:18:38.74:0,39,311	0/0:15,0:15:35.18:0,35,286	0/0:20,0:20:41.90:0,42,360	0/0:15,0:15:38.59:0,39,277	0/0:21,1:22:31.97:0,32,308	0/0:21,0:21:44.55:0,45,325	0/0:13,0:13:16.35:0,16,110
chr10	36835353	.	T	TAC	1501.41	PASS	AB=0.816;AC=27;AF=0.563;AN=48;BaseQRankSum=-0.994;DP=390;FS=6.085;HRun=0;HaplotypeScore=83.5535;InbreedingCoeff=0.4785;MQ=66.59;MQ0=12;MQRankSum=0.191;QD=7.15;ReadPosRankSum=-1.325;VQSLOD=2.1698;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:19,5:25:11.20:348,0,11	1/1:5,0:4:5.95:42,6,0	./.	./.	0/0:27,0:28:25.43:0,25,238	1/1:13,8:22:12.03:161,12,0	0/1:5,3:9:2.09:123,0,2	1/1:34,0:33:12.90:107,13,0	0/0:13,0:13:24.06:0,24,263	1/1:10,7:17:9.91:226,10,0	1/1:14,2:16:15.05:220,15,0	0/0:9,0:9:14.25:0,14,136	1/1:5,0:5:3.01:37,3,0	1/1:3,0:3:3:26,3,0	0/1:4,5:10:2.13:102,0,2	0/0:9,0:9:9.02:0,9,96	0/0:18,0:20:36.28:0,36,317	1/1:10,1:11:5.30:52,5,0	1/1:11,0:11:6.46:53,6,0	./.	0/1:5,1:6:26.81:39,0,27	./.	0/1:12,0:12:2.18:2,0,139	0/0:4,0:4:6.36:0,6,66	1/1:6,0:11:9:79,9,0	0/0:11,0:14:11.80:0,12,135	1/1:8,0:10:6:52,6,0	0/0:14,0:14:6.36:0,6,244
chr10	36836207	.	AGC	A	16146.72	PASS	AB=0.969;AC=48;AF=0.857;AN=56;BaseQRankSum=8.453;DP=708;FS=5.376;HRun=0;HaplotypeScore=103.2954;InbreedingCoeff=0.8250;MQ=69.22;MQ0=4;MQRankSum=1.530;QD=25.55;ReadPosRankSum=1.410;VQSLOD=5.5778;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,28:32:60.20:811,60,0	1/1:0,10:10:18.06:243,18,0	0/1:23,0:16:2.68:3,0,41	0/1:28,0:15:2.13:2,0,50	1/1:7,24:31:47.64:630,48,0	1/1:5,11:16:30.10:406,30,0	1/1:2,39:41:84.25:1118,84,0	1/1:3,16:19:51.07:573,51,0	1/1:0,27:26:54.18:730,54,0	1/1:3,35:38:99:1312,108,0	1/1:1,14:15:27.06:347,27,0	0/0:26,0:26:66.08:0,66,1021	1/1:3,23:26:57.19:770,57,0	1/1:5,21:26:45.15:607,45,0	1/1:2,24:26:54.18:730,54,0	1/1:0,25:26:60.05:785,60,0	1/1:1,19:20:54.18:730,54,0	1/1:4,15:19:36.12:487,36,0	1/1:1,20:21:57.03:635,57,0	1/1:3,20:23:42.14:567,42,0	1/1:2,55:57:99:1541,114,0	1/1:6,21:26:54.16:712,54,0	0/0:19,0:19:45.05:0,45,751	0/0:31,0:31:84.19:0,84,1355	1/1:1,16:17:39.13:527,39,0	1/1:3,24:27:66.18:845,66,0	1/1:1,22:23:54.16:712,54,0	1/1:0,12:11:24.08:324,24,0
chr10	36836792	.	AAGAC	A	6874.29	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=15.331;DP=629;FS=9.831;HRun=0;HaplotypeScore=126.4321;InbreedingCoeff=0.9929;MQ=69.08;MQ0=3;MQRankSum=-8.223;QD=23.38;ReadPosRankSum=3.770;VQSLOD=4.1301;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,29:35:78.22:1251,78,0	0/0:8,0:8:24.08:0,24,566	0/0:29,0:24:24.69:0,25,775	0/0:18,0:16:24.01:0,24,532	1/1:6,0:23:39.04:363,39,0	1/1:8,20:27:45.15:749,45,0	1/1:9,16:25:45.15:749,45,0	0/0:31,0:31:66.21:0,66,1471	1/1:8,0:25:36.04:335,36,0	1/1:12,19:31:63.21:1037,63,0	1/1:6,8:14:18.06:300,18,0	0/0:22,0:22:51.18:0,51,1225	0/0:19,0:19:45.15:0,45,1066	0/0:13,0:13:36.12:0,36,876	1/1:4,16:20:39.13:649,39,0	1/1:5,0:21:38.67:362,39,0	1/1:10,0:23:24.03:223,24,0	1/1:4,12:15:21.07:350,21,0	0/0:21,0:21:48.16:0,48,1138	0/0:25,0:25:57.20:0,57,1373	0/0:19,0:19:51.17:0,51,1220	0/0:24,0:24:57.14:0,57,1172	0/0:24,0:24:45.15:0,45,1102	0/0:31,0:31:75.26:0,75,1838	0/0:20,0:20:51.15:0,51,1160	1/1:6,0:28:43.77:395,44,0	0/0:31,0:31:75.24:0,75,1751	1/1:0,0:4:12.01:112,12,0
chr10	36836849	.	TTGTGTGTGTG	T	898.32	PASS	AB=0.968;AC=18;AF=0.360;AN=50;BaseQRankSum=1.903;DP=485;FS=0.875;HRun=0;HaplotypeScore=163.8183;InbreedingCoeff=-0.0662;MQ=53.99;MQ0=11;MQRankSum=0.686;QD=3.22;ReadPosRankSum=0.454;VQSLOD=2.5733;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:27,2:28:14.01:227,0,14	0/1:9,0:9:7.13:37,0,7	./.	./.	0/0:19,0:18:5.97:0,6,45	1/1:17,3:19:9.26:81,9,0	0/1:18,0:18:5.15:81,0,5	0/0:21,0:21:2.82:0,3,14	0/0:20,0:20:5.60:0,6,48	1/1:22,0:22:1.52:94,2,0	0/1:13,1:13:29.44:117,0,29	0/0:14,0:14:21.07:0,21,855	0/0:12,0:10:8.78:0,9,56	0/0:10,7:17:0:0,0,1	0/1:16,0:16:10.75:57,0,11	0/1:14,0:13:1.30:1,0,59	0/1:21,0:20:9.07:9,0,9	1/1:12,0:13:6.02:114,6,0	0/1:22,0:21:16.26:16,0,34	0/1:12,0:18:4.70:64,0,5	0/1:20,0:19:0.75:1,0,73	0/0:18,0:18:2.86:0,3,30	0/0:12,0:10:2.45:0,2,135	0/0:25,0:25:24.07:0,24,921	0/1:20,0:20:13.65:106,0,14	0/0:24,0:24:24.60:0,25,197	0/1:23,0:23:31.12:31,0,47	./.
chr10	36839842	.	GATTT	G	4064.03	PASS	AC=46;AF=0.958;AN=48;BaseQRankSum=1.885;DP=391;FS=0.000;HRun=0;HaplotypeScore=85.6734;InbreedingCoeff=0.2929;MQ=55.61;MQ0=2;MQRankSum=-0.082;QD=10.95;ReadPosRankSum=-1.365;VQSLOD=2.3424;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:22:9.43:82,9,0	1/1:0,3:3:9.03:140,9,0	./.	./.	1/1:18,5:23:17.51:246,18,0	1/1:19,0:19:21.02:196,21,0	1/1:5,0:4:3.47:26,3,0	1/1:38,0:38:6.01:62,6,0	1/1:9,4:13:3.01:46,3,0	1/1:22,0:22:25.39:230,25,0	1/1:16,0:16:9.01:83,9,0	0/0:2,0:2:3.01:0,3,73	1/1:5,2:7:15.01:165,15,0	1/1:4,3:6:7.90:116,8,0	1/1:14,0:14:11.45:102,11,0	1/1:2,4:6:9.03:139,9,0	1/1:4,21:25:30.10:465,30,0	1/1:25,0:24:15.72:146,16,0	1/1:15,6:21:9.43:119,9,0	1/1:6,5:11:12.34:103,12,0	1/1:3,5:8:9.03:134,9,0	1/1:2,3:5:2.92:17,3,0	./.	./.	1/1:7,11:18:27.09:408,27,0	1/1:15,7:22:27.28:363,27,0	1/1:8,14:23:18.56:306,19,0	1/1:6,12:18:24.08:368,24,0
chr10	36839870	.	CATTTATTT	C	2311.56	PASS	AC=12;AF=0.240;AN=50;BaseQRankSum=1.009;DP=365;FS=4.294;HRun=0;HaplotypeScore=117.5776;InbreedingCoeff=0.7914;MQ=55.10;MQ0=4;MQRankSum=-3.715;QD=19.10;ReadPosRankSum=2.622;VQSLOD=2.8485;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:6,12:18:9.03:231,9,0	0/0:4,0:4:12.02:0,12,160	0/0:6,0:1:3:0,3,28	./.	0/0:16,0:16:42.09:0,42,583	1/1:6,17:23:18.06:473,18,0	./.	0/0:27,0:24:36.11:0,36,619	0/0:8,0:8:9.02:0,9,107	1/1:5,17:22:42.11:788,42,0	1/1:4,11:15:20.98:312,21,0	0/0:2,0:2:6.02:0,6,175	0/0:6,0:6:12.02:0,12,136	0/0:5,0:4:12.03:0,12,139	1/1:5,13:18:6.02:153,6,0	0/0:4,0:4:9.01:0,9,85	0/0:30,0:30:57.13:0,57,793	1/1:7,17:25:24.08:523,24,0	0/0:22,0:20:42.12:0,42,647	0/0:10,0:10:18.05:0,18,283	0/0:7,0:7:12.03:0,12,143	0/0:5,0:5:3.01:0,3,53	0/0:2,0:2:6:0,6,76	./.	0/0:22,0:22:54.12:0,54,708	0/0:22,0:21:54.14:0,54,817	0/0:24,0:24:7.23:0,7,568	0/0:14,0:14:24.91:0,25,225
chr10	36840374	.	G	GGGA	1360.10	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-4.959;DP=464;FS=0.000;HRun=0;HaplotypeScore=66.1392;InbreedingCoeff=0.7607;MQ=60.62;MQ0=20;MQRankSum=-0.619;QD=21.25;ReadPosRankSum=1.210;VQSLOD=3.2230;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:51.15:0,51,687	0/0:7,0:7:9.03:0,9,125	0/0:20,0:6:0:0,0,0	0/0:15,0:8:2.03:0,2,13	1/1:1,5:8:3:60,3,0	0/0:16,0:16:30.09:0,30,404	0/0:20,0:20:41.55:0,42,560	0/0:26,0:25:20.44:0,20,199	1/1:8,2:10:3.01:60,3,0	0/0:19,0:19:32.93:0,33,422	0/0:12,0:11:24.06:0,24,297	0/0:24,0:23:45.10:0,45,554	0/0:11,0:11:27.03:0,27,319	0/0:20,0:20:41.57:0,42,513	0/0:16,0:16:24.06:0,24,297	1/1:5,7:12:12.04:241,12,0	1/1:5,13:14:33.11:661,33,0	0/0:15,0:15:6.68:0,7,262	0/0:15,0:12:21.07:0,21,297	0/0:11,0:8:15.05:0,15,203	0/0:53,0:51:99:0,102,1339	0/0:11,0:11:15.04:0,15,195	0/0:7,0:7:12.04:0,12,170	0/0:32,0:33:69.14:0,69,876	0/0:5,0:5:3.01:0,3,43	1/1:3,8:10:21.07:379,21,0	0/0:12,0:12:27.09:0,27,380	1/1:0,2:2:6.02:120,6,0
chr10	36840792	.	AG	A	6144.14	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=11.403;DP=585;FS=6.685;HRun=1;HaplotypeScore=57.8147;InbreedingCoeff=0.9987;MQ=88.55;MQ0=0;MQRankSum=-3.146;QD=39.90;ReadPosRankSum=2.798;VQSLOD=5.4650;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,28:29:87.27:1197,87,0	0/0:7,0:7:21.05:0,21,301	0/0:25,0:25:68.58:0,69,1102	0/0:18,0:18:47.37:0,47,702	0/0:11,0:11:33.10:0,33,503	1/1:0,22:22:63.21:880,63,0	1/1:0,30:30:84.28:1174,84,0	0/0:30,0:30:90.29:0,90,1396	0/0:19,0:19:57.16:0,57,863	1/1:0,20:20:60.20:838,60,0	1/1:0,10:10:27.09:377,27,0	0/0:27,0:27:81.28:0,81,1295	0/0:22,0:22:66.22:0,66,1050	0/0:28,0:28:78.27:0,78,1247	1/1:0,23:23:63.21:881,63,0	0/0:26,0:26:78.23:0,78,1197	0/0:34,0:34:99:0,102,1599	1/1:0,20:20:57.19:797,57,0	0/0:16,0:16:48.16:0,48,768	0/0:10,0:10:30.10:0,30,480	0/0:38,0:38:99:0,111,1774	0/0:17,0:17:51.17:0,51,815	0/0:9,0:9:27.08:0,27,409	0/0:26,0:26:78.22:0,78,1219	0/0:18,0:18:54.18:0,54,863	0/0:16,0:16:48.15:0,48,732	0/0:20,0:20:60.12:0,60,874	0/0:14,0:14:42.14:0,42,671
chr10	36841099	.	GT	G	6144.08	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=12.984;DP=681;FS=2.404;HRun=1;HaplotypeScore=64.1513;InbreedingCoeff=0.9999;MQ=88.68;MQ0=0;MQRankSum=-3.018;QD=38.16;ReadPosRankSum=2.812;VQSLOD=5.5950;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,34:34:90.30:1259,90,0	0/0:11,0:11:33.11:0,33,527	0/0:36,0:36:98.65:0,99,1544	0/0:18,0:18:47.79:0,48,749	0/0:17,0:17:48.16:0,48,763	1/1:0,23:23:66.22:923,66,0	1/1:0,18:18:51.17:713,51,0	0/0:41,0:41:99:0,123,1903	0/0:29,0:29:87.28:0,87,1362	1/1:1,27:28:81.26:1110,81,0	1/1:0,16:16:45.15:629,45,0	0/0:31,0:31:93.32:0,93,1481	0/0:17,0:17:51.17:0,51,812	0/0:32,0:32:96.33:0,96,1529	1/1:0,27:27:66.22:923,66,0	0/0:17,0:17:51.17:0,51,813	0/0:25,0:25:75.26:0,75,1195	1/1:0,15:15:42.14:587,42,0	0/0:29,0:29:87.30:0,87,1382	0/0:21,0:21:63.17:0,63,979	0/0:34,0:34:99:0,102,1631	0/0:18,0:18:51.17:0,51,815	0/0:20,0:20:57.19:0,57,901	0/0:27,0:27:81.28:0,81,1295	0/0:23,0:23:69.24:0,69,1103	0/0:26,0:26:78.27:0,78,1246	0/0:35,0:35:99:0,105,1606	0/0:13,0:13:36.07:0,36,524
chr10	36843134	.	TAGAGAGAGAGAG	T	555.73	PASS	AB=0.853;AC=9;AF=0.180;AN=50;BaseQRankSum=3.031;DP=572;FS=21.749;HRun=0;HaplotypeScore=185.0104;InbreedingCoeff=0.6079;MQ=61.61;MQ0=7;MQRankSum=-0.581;QD=4.71;ReadPosRankSum=-1.245;VQSLOD=1.1380;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:51.18:0,51,2137	0/0:10,0:10:15.05:0,15,475	./.	./.	1/1:30,0:28:3.01:34,3,0	0/0:17,0:17:9.03:0,9,467	0/0:16,0:18:20.90:0,21,514	0/0:44,0:44:18.45:0,18,238	1/1:18,4:23:5.70:151,6,0	0/0:20,0:20:12.04:0,12,586	0/0:19,0:19:33.10:0,33,1360	0/0:14,0:14:5.98:0,6,191	0/0:12,0:12:12.04:0,12,282	0/0:12,0:15:12.04:0,12,362	0/0:14,0:14:21.07:0,21,795	1/1:22,0:21:6.02:144,6,0	./.	0/0:20,0:20:21.07:0,21,780	0/0:21,0:21:25.22:0,25,564	0/0:22,0:23:15.04:0,15,395	0/0:20,0:20:12.04:0,12,320	0/0:22,0:21:15.04:0,15,373	0/0:21,0:21:18.06:0,18,589	0/0:14,0:21:30.10:0,30,1089	0/0:23,0:23:21.04:0,21,454	0/1:24,5:29:99:269,0,109	0/0:18,0:19:16.77:0,17,347	1/1:14,0:14:3.01:87,3,0
chr10	36844961	.	CACAT	C	31268.25	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=8.048;DP=1147;FS=2.274;HRun=0;HaplotypeScore=230.0161;InbreedingCoeff=0.9444;MQ=58.90;MQ0=7;MQRankSum=0.790;QD=32.67;ReadPosRankSum=5.485;VQSLOD=4.9392;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,34:42:77.28:1315,77,0	1/1:3,18:21:39.13:658,39,0	0/0:41,0:19:23.82:0,24,358	0/0:43,0:26:35.77:0,36,619	1/1:8,25:33:51.17:861,51,0	1/1:2,31:33:72.19:1215,72,0	1/1:7,22:29:50.99:859,51,0	1/1:19,13:32:42.13:678,42,0	1/1:8,49:57:99:2076,123,0	1/1:13,48:61:99:2361,147,0	1/1:8,23:31:50.96:861,51,0	0/0:47,0:47:99:0,117,2828	1/1:5,37:43:80.77:1334,81,0	1/1:7,37:44:33.13:1459,33,0	1/1:13,55:68:99:2380,141,0	1/1:14,59:73:99:2228,132,0	1/1:4,24:28:53.85:911,54,0	1/1:8,16:23:0.56:570,1,0	1/1:5,20:24:60.16:902,60,0	1/1:3,26:29:68.92:1164,69,0	1/1:18,68:86:99:2634,157,0	1/1:9,38:47:84.26:1418,84,0	0/0:25,0:25:54.19:0,54,1337	0/0:33,0:33:69.22:0,69,1625	1/1:4,27:31:72.25:1215,72,0	1/1:21,38:58:99:1942,117,0	1/1:8,33:41:72.25:1215,72,0	1/1:0,20:20:60.21:1013,60,0
chr10	36845898	.	CCCT	C	1801.66	PASS	AB=1.000;AC=26;AF=0.464;AN=56;BaseQRankSum=1.760;DP=411;FS=11.768;HRun=0;HaplotypeScore=77.5062;InbreedingCoeff=0.0509;MQ=86.31;MQ0=0;MQRankSum=-2.284;QD=7.15;ReadPosRankSum=-4.082;VQSLOD=-0.0406;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:13,0:13:27.56:28,0,56	1/1:3,0:3:1.28:23,1,0	0/0:19,0:19:54.14:0,54,1016	0/0:20,0:20:47.38:0,47,946	1/1:10,2:12:23.88:191,24,0	0/1:14,0:14:70.30:70,0,98	0/0:16,0:16:20.96:0,21,141	0/1:18,0:18:4.99:165,0,5	1/1:18,1:19:30.46:172,30,0	0/1:15,0:15:88.30:88,0,137	1/1:6,0:6:0.12:35,0,0	0/0:31,0:31:90.29:0,90,1859	0/1:11,0:11:35.15:35,0,59	0/0:10,0:10:0.14:0,0,145	0/1:13,0:13:36.85:37,0,85	0/1:16,0:16:7.76:17,0,8	1/1:24,4:28:36.11:272,36,0	0/1:11,0:11:36.02:36,0,129	0/1:7,0:7:62.23:62,0,63	0/1:12,0:12:34.79:67,0,35	0/1:12,0:12:18.31:74,0,18	0/0:5,0:5:6.01:0,6,63	0/0:15,0:15:45.14:0,45,920	0/0:27,0:27:81.26:0,81,1654	0/1:6,0:6:41.13:41,0,42	1/1:20,1:21:54.58:382,55,0	0/0:16,0:16:16.93:0,17,325	1/1:14,1:15:33.20:184,33,0
chr10	36845899	.	CCT	C	4046.68	PASS	AB=0.992;AC=34;AF=0.607;AN=56;BaseQRankSum=1.993;DP=417;FS=3.180;HRun=0;HaplotypeScore=64.1598;InbreedingCoeff=0.1797;MQ=86.83;MQ0=0;MQRankSum=-4.709;QD=14.15;ReadPosRankSum=-4.497;VQSLOD=2.4937;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:14:0.60:86,1,0	1/1:4,0:4:10.51:75,11,0	0/0:19,0:19:54.14:0,54,812	0/0:21,0:21:47.32:0,47,753	1/1:3,9:12:23.96:271,24,0	0/1:14,0:14:24.31:115,0,24	0/1:15,0:15:5.01:85,0,5	1/1:18,0:18:25.64:204,26,0	1/1:2,17:19:33.09:477,33,0	0/1:16,0:16:40.45:133,0,40	1/1:5,1:6:14:115,14,0	0/0:32,0:32:93.28:0,93,1524	0/1:11,0:11:0.70:95,0,1	0/1:10,0:10:28.88:29,0,44	0/1:13,0:13:9.52:122,0,10	1/1:14,2:16:19.42:114,19,0	1/1:4,24:28:42.04:546,42,0	0/1:10,1:11:49.37:64,0,49	0/1:8,0:8:22.61:96,0,23	1/1:12,0:12:0.82:90,1,0	1/1:12,0:12:0.47:92,0,0	0/1:5,0:5:16.74:17,0,24	0/0:15,0:15:45.14:0,45,748	0/0:28,0:28:84.25:0,84,1361	0/1:6,0:6:7.95:43,0,8	1/1:4,17:21:56.59:654,57,0	0/0:16,0:16:1.23:0,1,111	1/1:2,13:15:36.10:523,36,0
chr10	36845900	.	CT	C	4368.11	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=3.709;DP=423;FS=8.265;HRun=1;HaplotypeScore=59.4522;InbreedingCoeff=0.9190;MQ=85.71;MQ0=0;MQRankSum=-4.099;QD=14.23;ReadPosRankSum=-5.689;VQSLOD=1.5734;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,2:16:27.29:204,27,0	1/1:5,0:5:11.90:89,12,0	0/0:18,0:18:53.95:0,54,637	0/0:21,0:21:47.23:0,47,608	1/1:11,1:12:24.68:161,25,0	1/1:13,1:14:19.22:227,19,0	1/1:11,4:15:31.36:312,31,0	1/1:18,0:18:28.27:248,28,0	1/1:18,1:19:32.72:225,33,0	1/1:16,1:17:17.61:232,18,0	1/1:6,0:6:14.98:154,15,0	0/0:32,0:32:93.26:0,93,1212	1/1:12,0:12:23.28:217,23,0	1/1:10,0:10:16.58:111,17,0	1/1:12,1:13:23.05:229,23,0	1/1:2,14:16:21.45:249,21,0	1/1:28,0:28:42.01:282,42,0	1/1:9,2:11:12.65:115,13,0	1/1:7,1:8:7.13:138,7,0	1/1:11,1:12:18.80:136,19,0	1/1:12,0:12:15.60:111,16,0	1/1:5,0:5:5.92:33,6,0	0/0:15,0:15:45.14:0,45,592	0/0:30,0:30:87.15:0,87,1077	1/1:6,1:7:11.17:79,11,0	1/1:18,3:21:56.71:430,57,0	1/1:16,0:16:22.38:138,22,0	1/1:14,0:14:35.69:246,36,0
chr10	36846429	.	C	CTAT	4560.98	PASS	AB=0.559;AC=29;AF=0.518;AN=56;BaseQRankSum=11.448;DP=469;FS=3.780;HRun=0;HaplotypeScore=107.3861;InbreedingCoeff=-0.2232;MQ=65.43;MQ0=2;MQRankSum=-2.316;QD=10.94;ReadPosRankSum=9.845;VQSLOD=3.2827;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,0:22:2.10:97,2,0	0/1:1,0:5:30.71:48,0,31	0/0:7,0:6:9.91:0,10,133	0/0:3,0:3:5.38:0,5,63	0/1:4,1:28:99:337,0,117	0/1:4,0:19:50.04:50,0,95	1/1:2,0:14:6.05:86,6,0	0/1:9,0:44:99:573,0,259	0/1:2,1:14:63.65:96,0,64	0/1:5,0:28:95.62:135,0,96	0/1:3,0:23:39.75:83,0,40	0/0:10,0:10:30.10:0,30,526	0/1:2,0:13:54.66:173,0,55	0/1:3,0:6:16.69:17,0,110	0/1:3,0:16:48.19:62,0,48	0/1:2,0:6:66.66:71,0,67	0/1:2,0:34:3.52:604,0,4	0/1:2,0:21:0.39:89,0,0	0/1:1,1:9:13.81:204,0,14	0/1:3,0:14:94.15:94,0,116	1/1:0,0:7:15.02:143,15,0	1/1:0,0:9:14.76:143,15,0	0/0:15,0:15:45.15:0,45,806	0/0:17,0:17:51.16:0,51,903	1/1:0,0:20:47.55:433,48,0	1/1:0,0:24:47.89:475,48,0	0/1:6,0:26:99:352,0,147	0/1:5,0:12:13.80:195,0,14
chr10	36848611	.	GCACACACACA	G	2112.29	PASS	AB=0.798;AC=17;AF=0.327;AN=52;BaseQRankSum=2.447;DP=430;FS=51.421;HRun=0;HaplotypeScore=121.1802;InbreedingCoeff=0.3980;MQ=71.80;MQ0=8;MQRankSum=-3.699;QD=11.80;ReadPosRankSum=-1.594;VQSLOD=0.4127;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:22,9:30:15.52:445,16,0	./.	0/0:29,0:15:3.01:0,3,37	./.	0/1:7,1:7:41.72:83,0,42	1/1:11,0:14:12.04:209,12,0	1/1:10,2:11:6.02:178,6,0	0/0:11,0:10:9.03:0,9,174	0/1:10,0:18:34.47:34,0,125	1/1:11,4:15:12.04:239,12,0	1/1:17,5:25:11.49:248,11,0	0/0:9,0:9:18.03:0,18,653	0/0:9,0:12:15.05:0,15,247	0/0:4,0:4:3.01:0,3,48	1/1:10,5:16:20.28:521,20,0	0/0:9,0:13:8.20:0,8,58	0/0:10,0:13:11.21:0,11,94	0/1:11,3:14:24.34:236,0,24	0/0:9,0:10:9.03:0,9,144	0/0:7,0:10:12.04:0,12,199	0/0:16,0:24:6.02:0,6,91	0/0:12,0:15:13.84:0,14,164	0/0:13,0:10:12.04:0,12,438	0/0:13,0:25:27.09:0,27,1032	0/0:9,0:13:6.02:0,6,98	0/1:12,1:16:71.22:71,0,168	0/0:9,0:13:14.62:0,15,206	0/1:7,0:9:23.67:24,0,52
chr10	36850596	.	C	CTT	13187.31	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=12.941;DP=459;FS=2.408;HRun=0;HaplotypeScore=157.1523;InbreedingCoeff=0.9714;MQ=79.15;MQ0=1;MQRankSum=-13.947;QD=37.04;ReadPosRankSum=1.671;VQSLOD=6.2115;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,23:27:68.56:883,69,0	1/1:1,4:5:15.05:222,15,0	0/0:19,0:19:54.17:0,54,829	0/0:17,0:16:45.15:0,45,688	1/1:0,6:6:13.59:171,14,0	1/1:0,12:14:42.13:563,42,0	1/1:2,15:19:54.17:741,54,0	1/1:2,9:11:33.09:441,33,0	1/1:0,18:20:57.19:790,57,0	1/1:0,4:4:12.04:170,12,0	1/1:0,7:7:21.07:279,21,0	0/0:30,0:30:90.31:0,90,1466	1/1:1,15:17:48.16:661,48,0	1/1:0,14:14:42.14:583,42,0	1/1:4,22:27:72.91:1044,73,0	1/1:2,16:18:51.17:720,51,0	1/1:0,20:21:52.52:794,53,0	1/1:5,20:25:63.08:828,63,0	1/1:0,10:10:30.10:434,30,0	1/1:0,7:7:20.56:257,21,0	1/1:4,18:24:49.06:592,49,0	1/1:1,13:14:39.13:543,39,0	0/0:5,0:5:15.05:0,15,235	0/0:32,0:32:93.32:0,93,1516	1/1:0,19:19:57.19:789,57,0	1/1:3,21:24:63.21:897,63,0	1/1:1,13:14:42.14:613,42,0	1/1:3,4:7:12.04:173,12,0
chr10	36850597	.	G	GTAA	20876.23	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=12.852;DP=534;FS=1.330;HRun=0;HaplotypeScore=177.8816;InbreedingCoeff=0.9888;MQ=75.12;MQ0=1;MQRankSum=-14.883;QD=48.55;ReadPosRankSum=-1.027;VQSLOD=5.5920;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:14,23:37:92.94:1529,93,0	1/1:1,4:5:15.02:236,15,0	0/0:19,0:19:54.18:0,54,974	0/0:18,0:17:48.16:0,48,857	1/1:4,6:9:21.07:374,21,0	1/1:4,11:16:48.16:833,48,0	1/1:12,15:27:72.24:1336,72,0	1/1:3,9:12:36.12:707,36,0	1/1:6,17:24:66.23:1199,66,0	1/1:12,4:15:45.11:744,45,0	1/1:0,7:7:21.03:339,21,0	0/0:30,0:30:90.31:0,90,1677	1/1:4,15:19:54.19:970,54,0	1/1:2,14:16:48.16:876,48,0	1/1:9,22:31:93.16:1617,93,0	1/1:6,16:22:63.18:1130,63,0	1/1:5,20:25:63.04:1087,63,0	1/1:7,20:27:68.79:1097,69,0	1/1:4,10:14:42.14:785,42,0	1/1:0,7:7:21.07:386,21,0	1/1:8,18:26:59.96:954,60,0	1/1:4,13:17:48.16:890,48,0	0/0:5,0:5:15.05:0,15,278	0/0:32,0:32:93.32:0,93,1734	1/1:2,19:21:60.21:1090,60,0	1/1:5,21:26:75.26:1392,75,0	1/1:5,13:18:53.85:964,54,0	1/1:3,4:7:21.06:344,21,0
chr10	36851352	.	AT	A	3705.65	PASS	AB=0.909;AC=15;AF=0.268;AN=56;BaseQRankSum=13.401;DP=581;FS=8.660;HRun=9;HaplotypeScore=73.9486;InbreedingCoeff=0.9250;MQ=64.50;MQ0=0;MQRankSum=-6.257;QD=20.14;ReadPosRankSum=1.048;VQSLOD=4.0866;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,24:33:66.01:603,66,0	0/0:11,0:11:30.09:0,30,346	0/0:3,0:3:6.01:0,6,60	0/0:9,1:10:21.05:0,21,227	0/1:18,2:20:1.52:2,0,479	1/1:2,10:12:30:274,30,0	1/1:7,21:28:72.03:658,72,0	0/0:25,0:25:57.17:0,57,657	0/0:20,0:20:54.15:0,54,615	1/1:0,23:23:66.03:604,66,0	1/1:4,14:18:39.01:357,39,0	0/0:33,1:34:68.82:0,69,1040	0/0:14,0:14:42.12:0,42,485	0/0:20,0:20:51.15:0,51,589	1/1:4,25:28:78.03:713,78,0	0/0:11,0:11:33.09:0,33,373	0/0:39,0:39:99:0,105,1189	1/1:3,18:21:54.01:494,54,0	0/0:26,0:26:62.18:0,62,670	0/0:9,0:9:24.07:0,24,277	0/0:20,0:20:57.17:0,57,658	0/0:19,0:20:47.97:0,48,534	0/0:14,0:14:39.12:0,39,449	0/0:37,0:37:99:0,99,1130	0/0:30,0:30:81.22:0,81,924	0/0:24,1:25:35.70:0,36,653	0/0:20,1:20:35.68:0,36,636	0/0:8,0:8:18.05:0,18,208
chr10	36851392	.	AAC	A	6126.95	PASS	AB=0.931;AC=15;AF=0.268;AN=56;BaseQRankSum=16.506;DP=619;FS=0.000;HRun=0;HaplotypeScore=93.8828;InbreedingCoeff=0.9310;MQ=86.15;MQ0=0;MQRankSum=-7.533;QD=31.91;ReadPosRankSum=-0.048;VQSLOD=6.7545;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,31:33:84.28:1202,84,0	0/0:17,0:17:48.16:0,48,864	0/0:21,0:21:60.09:0,60,991	0/0:22,0:22:56.65:0,57,1069	0/0:16,0:16:48.14:0,48,821	1/1:1,12:13:30.10:430,30,0	1/1:1,29:30:87.29:1246,87,0	0/0:19,0:19:57.20:0,57,1041	0/0:21,0:21:63.22:0,63,1152	1/1:4,18:22:54.18:773,54,0	1/1:3,12:15:36.05:490,36,0	0/0:32,0:32:96.33:0,96,1751	0/0:20,0:20:60.18:0,60,1067	0/0:23,0:23:63.20:0,63,1124	1/1:1,31:32:93.31:1323,93,0	0/0:13,0:13:39.13:0,39,714	0/0:31,0:31:90.31:0,90,1639	1/1:3,17:20:48.12:659,48,0	0/0:24,0:24:69.23:0,69,1237	0/0:10,0:10:30.10:0,30,549	0/0:22,0:22:63.20:0,63,1118	0/0:24,0:24:69.24:0,69,1237	0/0:20,0:20:60.18:0,60,1067	0/0:33,0:33:99:0,99,1801	0/0:23,0:23:66.21:0,66,1157	0/1:25,2:27:4.71:5,0,1288	0/0:23,0:22:69.24:0,69,1264	0/0:13,0:13:39.13:0,39,692
chr10	36853224	.	TAA	T	3806.49	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-1.167;DP=527;FS=5.550;HRun=9;HaplotypeScore=148.2774;InbreedingCoeff=0.9637;MQ=71.40;MQ0=0;MQRankSum=-6.747;QD=30.70;ReadPosRankSum=1.570;VQSLOD=2.4740;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:63.19:0,63,1007	0/0:6,0:6:17.87:0,18,156	0/0:14,0:15:36.07:0,36,514	0/0:10,0:10:22.46:0,22,309	1/1:2,20:22:54.14:626,54,0	0/0:19,0:19:48.11:0,48,736	0/0:20,0:20:54.18:0,54,886	0/0:24,0:24:68.57:0,69,581	1/1:2,20:22:60.18:699,60,0	0/0:23,0:23:63.21:0,63,1011	0/0:25,0:25:66.23:0,66,1083	0/0:12,0:12:30.10:0,30,492	0/0:22,0:22:59:0,59,437	0/0:8,0:8:20.59:0,21,128	0/0:18,0:18:45.15:0,45,739	1/1:3,16:19:54.14:615,54,0	1/1:3,17:20:54.15:627,54,0	0/0:17,0:17:36.09:0,36,562	0/0:13,0:12:12.34:0,12,163	0/0:36,0:36:99:0,101,741	0/0:6,0:6:11.88:0,12,94	0/0:22,0:22:55.94:0,56,405	0/0:17,0:17:51.17:0,51,819	0/0:2,0:2:6.02:0,6,98	0/0:25,0:25:64.62:0,65,406	1/1:4,24:28:78.21:891,78,0	0/0:37,0:37:72.80:0,73,624	1/1:3,10:13:30.08:349,30,0
chr10	36853233	.	AC	A	6532.15	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=0.220;DP=520;FS=5.188;HRun=2;HaplotypeScore=133.7475;InbreedingCoeff=0.9780;MQ=70.61;MQ0=0;MQRankSum=-4.879;QD=34.02;ReadPosRankSum=-0.717;VQSLOD=3.8936;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:69.13:0,69,873	1/1:2,5:7:18.05:219,18,0	0/0:15,0:15:27.07:0,27,342	0/0:9,0:9:22.62:0,23,279	0/0:24,0:24:65.07:0,65,342	0/0:20,0:20:46.95:0,47,608	0/0:19,0:19:51.17:0,51,706	1/1:6,19:25:69.17:842,69,0	0/0:21,0:21:57.24:0,57,291	0/0:22,0:22:66.21:0,66,889	0/0:27,0:27:80.72:0,81,1011	0/0:11,0:11:33.09:0,33,441	1/1:2,18:20:54.17:689,54,0	1/1:3,7:10:29.98:329,30,0	0/0:17,0:17:48.14:0,48,649	0/0:21,0:21:59.18:0,59,362	0/0:19,0:19:52.45:0,52,283	0/0:15,0:15:36.09:0,36,465	1/1:6,9:14:38.82:427,39,0	1/1:6,29:35:99:1277,102,0	1/1:1,4:5:12.02:139,12,0	1/1:2,16:18:45.32:629,45,0	0/0:19,0:19:57.15:0,57,742	0/0:2,0:2:6.02:0,6,83	1/1:2,22:24:72.21:894,72,0	0/0:29,0:29:81.35:0,81,470	1/1:7,26:33:90.14:1088,90,0	0/0:12,0:12:33.40:0,33,177
chr10	36853258	.	TAA	T	15982.19	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=7.585;DP=517;FS=1.221;HRun=5;HaplotypeScore=106.2019;InbreedingCoeff=0.9174;MQ=64.40;MQ0=2;MQRankSum=-4.851;QD=34.52;ReadPosRankSum=0.541;VQSLOD=4.1402;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,29:30:66.22:922,66,0	1/1:0,2:2:6.02:84,6,0	0/0:8,0:8:3.28:0,3,240	0/0:9,0:8:12:0,12,155	1/1:0,19:18:54.18:738,54,0	1/1:1,23:24:51.17:713,51,0	1/1:1,16:17:39.13:545,39,0	1/1:6,26:31:81.21:1063,81,0	1/1:4,18:22:48.16:665,48,0	1/1:1,26:27:81.21:1063,81,0	1/1:0,26:25:69.23:952,69,0	0/0:14,0:14:36.12:0,36,660	1/1:2,18:20:48.16:663,48,0	1/1:0,11:11:30.10:417,30,0	1/1:1,15:16:39.13:545,39,0	1/1:0,19:19:51.17:711,51,0	1/1:7,10:17:39.07:519,39,0	1/1:2,14:16:36.12:503,36,0	1/1:1,11:11:33.05:393,33,0	1/1:2,23:25:57.18:787,57,0	1/1:1,5:6:12.04:167,12,0	1/1:1,19:20:54.18:751,54,0	0/0:18,0:18:54.16:0,54,931	0/0:5,0:5:15.05:0,15,275	1/1:4,22:26:72.23:980,72,0	1/1:4,27:31:81.26:1112,81,0	1/1:3,26:29:78.24:1063,78,0	1/1:1,15:16:45.15:627,45,0
chr10	36854327	.	T	TGGAA	1619.43	PASS	AB=0.962;AC=19;AF=0.365;AN=52;BaseQRankSum=2.019;DP=541;FS=21.922;HRun=0;HaplotypeScore=105.3531;InbreedingCoeff=0.8188;MQ=69.42;MQ0=2;MQRankSum=-3.460;QD=8.22;ReadPosRankSum=-2.494;VQSLOD=0.1305;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:22,2:26:12.46:171,12,0	0/0:14,0:14:21.06:0,21,301	./.	./.	1/1:12,9:21:30.10:687,30,0	1/1:15,0:15:8.98:111,9,0	1/1:24,0:24:11.17:103,11,0	1/1:22,0:22:0.47:1,0,0	0/0:17,0:16:24.08:0,24,368	1/1:14,0:14:21.05:291,21,0	1/1:7,0:7:3:25,3,0	0/1:24,1:25:33.96:34,0,470	0/0:16,0:16:21.07:0,21,319	0/0:17,0:17:30.04:0,30,393	1/1:21,0:24:23.61:247,24,0	0/0:23,0:23:39.10:0,39,551	0/0:29,0:29:35.37:0,35,760	1/1:19,0:19:11.44:137,11,0	0/0:10,0:9:15.04:0,15,210	0/0:20,0:21:39.11:0,39,548	0/0:38,0:38:45.13:0,45,657	0/0:19,0:19:27.09:0,27,413	0/0:9,0:9:21.04:0,21,278	0/0:34,0:35:48.14:0,48,708	0/0:14,0:14:24.03:0,24,302	0/0:14,0:14:24.07:0,24,349	0/0:34,0:34:42.11:0,42,618	0/0:9,0:9:12.04:0,12,184
chr10	36854776	.	G	GAA	5275.94	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-8.817;DP=629;FS=4.579;HRun=10;HaplotypeScore=110.8189;InbreedingCoeff=0.9796;MQ=62.10;MQ0=4;MQRankSum=0.108;QD=26.38;ReadPosRankSum=-1.639;VQSLOD=4.3078;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:47:99:0,120,1178	1/1:3,4:8:15.04:207,15,0	0/0:12,0:10:16.95:0,17,243	0/0:8,0:8:6.30:0,6,141	0/0:2,0:31:68.83:0,69,315	0/0:17,0:17:26.98:0,27,275	0/0:30,0:30:68.82:0,69,667	1/1:8,19:28:63.12:839,63,0	0/0:1,0:22:49.39:0,49,213	0/0:31,0:31:72.05:0,72,728	0/0:20,0:20:48.07:0,48,487	0/0:17,0:16:44.67:0,45,436	1/1:2,9:12:17.54:222,18,0	1/1:7,16:23:33.11:492,33,0	0/0:23,0:23:54.09:0,54,549	0/0:1,0:20:41.16:0,41,178	0/0:5,0:26:63.63:0,64,310	0/0:35,0:35:81.03:0,81,802	1/1:5,13:18:42.07:579,42,0	1/1:7,14:22:41.47:515,41,0	1/1:4,18:22:39.13:581,39,0	1/1:5,22:27:63.20:921,63,0	0/0:19,0:19:48.06:0,48,480	0/0:33,0:33:69.07:0,69,691	1/1:6,7:13:27.04:358,27,0	0/0:1,0:23:54.33:0,54,237	1/1:12,13:25:40.05:561,40,0	0/0:2,0:14:32.93:0,33,142
chr10	36855836	.	C	CT	2426.71	PASS	AB=0.615;AC=11;AF=0.196;AN=56;BaseQRankSum=-8.414;DP=565;FS=1.420;HRun=10;HaplotypeScore=61.2033;InbreedingCoeff=0.9317;MQ=72.02;MQ0=0;MQRankSum=-0.868;QD=19.41;ReadPosRankSum=2.721;VQSLOD=4.5703;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:29:72.96:0,73,574	0/0:16,0:17:43.92:0,44,340	0/0:12,0:12:19.89:0,20,140	0/0:8,0:9:21.22:0,21,149	1/1:3,18:21:45.03:455,45,0	0/0:19,0:19:50.92:0,51,416	0/0:16,0:17:43.97:0,44,351	0/0:32,0:33:70.89:0,71,566	1/1:4,18:22:26.51:487,27,0	0/0:22,0:22:55.76:0,56,438	0/0:12,0:12:29.95:0,30,246	0/0:16,0:16:38.92:0,39,317	0/0:22,0:22:50.91:0,51,418	0/0:17,0:19:45.99:0,46,353	0/0:16,0:17:40.97:0,41,324	1/1:3,18:21:45.11:480,45,0	1/1:4,26:31:25.06:712,25,0	0/0:27,0:27:68.87:0,69,563	0/0:18,1:19:15.96:0,16,337	0/0:22,0:23:64.94:0,65,520	0/0:19,0:19:47.94:0,48,394	0/0:26,0:26:56.89:0,57,468	0/0:17,0:17:44.94:0,45,369	0/0:23,0:26:69.01:0,69,532	0/0:16,0:16:35.91:0,36,293	0/1:6,9:16:0.75:182,0,1	0/0:21,1:21:14.97:0,15,319	1/1:4,10:14:27.07:288,27,0
chr10	36856032	.	G	GC	656.24	PASS	AB=0.723;AC=21;AF=0.375;AN=56;BaseQRankSum=7.598;DP=537;FS=7.583;HRun=0;HaplotypeScore=105.0504;InbreedingCoeff=0.7329;MQ=54.92;MQ0=61;MQRankSum=-7.079;QD=3.23;ReadPosRankSum=1.497;VQSLOD=2.7965;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:17,3:15:8.27:42,8,0	0/0:6,0:6:18.06:0,18,245	0/0:36,0:13:38.34:0,38,487	0/0:41,0:24:62.28:0,62,729	0/0:9,2:11:0:0,0,0	1/1:13,1:16:2.72:14,3,0	1/1:11,2:11:3.48:36,3,0	0/0:27,0:27:74.14:0,74,977	1/1:5,2:8:5.84:42,6,0	1/1:18,3:16:23.60:250,24,0	0/1:9,0:10:0.04:0,0,0	0/0:18,0:18:24.07:0,24,314	0/0:19,0:18:50.38:0,50,661	0/0:11,0:11:18.05:0,18,231	0/1:1,3:8:0:0,0,0	1/1:13,0:15:9.07:47,9,0	1/1:26,1:19:7.18:66,7,0	0/1:11,1:10:18.70:54,0,19	0/0:15,0:12:31.65:0,32,417	0/0:9,0:7:18.06:0,18,252	0/0:35,0:31:63.63:0,64,840	0/0:11,0:10:8.53:0,9,126	0/0:17,0:15:30.49:0,30,377	0/0:37,0:36:57.59:0,58,733	0/0:17,0:15:24.07:0,24,314	1/1:17,1:16:28.68:161,29,0	0/0:22,0:20:57.11:0,57,719	1/1:3,5:10:13.57:127,14,0
chr10	36856034	.	GGTGTGTGTGTGTGT	G	1717.20	PASS	AB=0.975;AC=24;AF=0.462;AN=52;BaseQRankSum=-1.422;DP=573;FS=3.940;HRun=0;HaplotypeScore=180.4092;InbreedingCoeff=0.5904;MQ=52.44;MQ0=64;MQRankSum=0.647;QD=6.84;ReadPosRankSum=-1.801;VQSLOD=2.4915;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:17:3.04:0,3,92	1/1:7,1:8:3.01:117,3,0	./.	0/1:37,0:20:0:0,0,0	1/1:13,0:11:1.77:4,2,0	0/0:20,0:18:5.30:0,5,175	0/0:14,0:12:3.89:0,4,37	1/1:25,3:27:8.98:136,9,0	0/0:11,0:9:3.65:0,4,156	0/0:30,0:22:51.14:0,51,1347	./.	0/0:9,0:18:21.07:0,21,709	1/1:16,3:18:20.94:453,21,0	1/1:8,3:11:3.01:109,3,0	1/1:15,0:11:1.72:4,2,0	0/0:18,0:17:6.91:0,7,165	0/0:30,0:20:10.84:0,11,226	0/0:16,0:9:15.05:0,15,404	1/1:15,1:13:2.65:174,3,0	1/1:10,1:10:9.87:106,10,0	0/1:36,1:34:47.99:167,0,48	1/1:12,0:11:4.06:57,4,0	0/0:13,0:14:5.86:0,6,216	0/0:26,0:37:24.07:0,24,896	1/1:9,8:15:11.94:194,12,0	0/0:22,0:18:27.09:0,27,730	1/1:22,3:23:17.98:365,18,0	0/0:14,0:12:18.73:0,19,661
chr10	36856036	.	T	TGC	71.39	PASS	AB=0.938;AC=12;AF=0.214;AN=56;BaseQRankSum=4.881;DP=595;FS=2.131;HRun=0;HaplotypeScore=141.4148;InbreedingCoeff=0.1582;MQ=49.03;MQ0=67;MQRankSum=-4.945;QD=0.37;ReadPosRankSum=-2.641;VQSLOD=2.3576;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:17:14.07:0,14,93	0/0:8,0:8:17.85:0,18,132	0/0:34,0:11:31.32:0,31,274	0/0:34,0:17:45.27:0,45,434	0/1:13,2:12:0:0,0,0	0/1:21,0:19:5.35:5,0,8	1/1:17,0:15:2.45:8,2,0	0/0:28,0:27:71.79:0,72,613	0/1:12,2:12:14.79:26,0,15	0/1:31,1:23:24.59:25,0,110	1/1:14,0:14:0.29:1,0,0	0/0:20,0:20:20.13:0,20,153	0/0:18,0:16:46.98:0,47,327	0/0:10,0:10:14.91:0,15,116	0/1:15,0:11:0:0,0,0	0/1:21,0:20:25.02:25,0,51	0/1:31,0:21:14.76:15,0,15	0/0:16,0:9:11.74:0,12,66	0/0:18,0:14:36.53:0,37,266	0/0:14,0:12:23.99:0,24,162	0/0:42,0:35:65.87:0,66,482	0/0:16,0:15:13.58:0,14,98	0/0:16,0:14:23.78:0,24,176	0/0:39,0:36:49.42:0,49,394	0/0:17,0:14:22.70:0,23,163	0/0:23,0:19:4.35:0,4,171	0/0:24,0:22:50.32:0,50,356	0/1:10,4:12:62.69:89,0,63
chr10	36856150	.	CTAAG	C	5832.35	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=10.827;DP=575;FS=1.322;HRun=0;HaplotypeScore=98.1178;InbreedingCoeff=0.9980;MQ=92.30;MQ0=0;MQRankSum=-9.191;QD=50.72;ReadPosRankSum=1.431;VQSLOD=5.4689;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,30:30:78.27:1557,78,0	0/0:14,0:14:42.13:0,42,1114	0/0:24,0:24:69.23:0,69,1775	0/0:26,0:26:78.24:0,78,2010	0/0:13,0:13:39.13:0,39,1077	1/1:1,11:12:30.10:599,30,0	1/1:1,19:20:45.15:899,45,0	0/0:28,0:28:84.28:0,84,2174	0/0:17,0:17:51.18:0,51,1423	1/1:0,16:16:48.15:922,48,0	1/1:1,6:7:18.06:359,18,0	0/0:27,0:27:81.28:0,81,2267	0/0:22,0:22:66.23:0,66,1816	0/0:23,0:23:69.24:0,69,1890	1/1:0,19:19:51.18:1018,51,0	0/0:24,0:24:69.24:0,69,1925	0/0:25,0:25:72.25:0,72,1999	1/1:0,11:11:24.08:479,24,0	0/0:15,0:15:42.14:0,42,1093	0/0:27,0:27:81.26:0,81,2178	0/0:24,0:24:66.23:0,66,1847	0/0:23,0:23:69.24:0,69,1928	0/0:17,0:17:51.16:0,51,1346	0/0:37,0:37:99:0,105,2865	0/0:21,0:21:63.22:0,63,1733	0/0:16,0:16:48.16:0,48,1343	0/0:22,0:21:66.23:0,66,1830	0/0:15,0:15:45.15:0,45,1213
chr10	36857836	.	C	CTT	5174.14	PASS	AB=0.538;AC=19;AF=0.339;AN=56;BaseQRankSum=-4.983;DP=691;FS=2.108;HRun=10;HaplotypeScore=84.1766;InbreedingCoeff=0.9235;MQ=63.99;MQ0=6;MQRankSum=0.032;QD=24.76;ReadPosRankSum=-0.117;VQSLOD=4.7643;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:38:82.99:0,83,971	1/1:0,6:7:21.06:297,21,0	0/0:39,0:21:27.04:0,27,278	0/0:29,0:15:11.19:0,11,169	0/0:37,0:38:70.98:0,71,781	0/0:29,0:29:58.85:0,59,649	0/0:19,0:19:54.10:0,54,541	1/1:11,26:36:77.93:985,78,0	0/0:26,0:26:69.10:0,69,694	0/0:29,0:28:60.04:0,60,608	0/0:28,0:28:64.55:0,65,749	0/0:18,0:18:39.03:0,39,385	1/1:3,16:20:33.41:447,33,0	0/1:2,12:14:6.39:290,0,6	0/0:17,0:17:36:0,36,365	0/0:20,0:20:57.12:0,57,579	0/0:35,0:36:95.88:0,96,936	0/0:21,0:21:60.13:0,60,606	1/1:11,10:22:25.50:337,25,0	1/1:4,20:25:56.65:784,57,0	1/1:1,9:11:24.08:357,24,0	1/1:1,17:20:50.57:660,51,0	0/0:20,0:20:45.05:0,45,456	0/0:21,0:21:60.12:0,60,605	1/1:5,23:28:39.13:581,39,0	0/0:34,0:35:86.83:0,87,862	1/1:5,16:23:33:436,33,0	0/0:14,0:14:11.54:0,12,173
chr10	36858790	.	CTT	C	7203.40	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=14.027;DP=524;FS=13.966;HRun=11;HaplotypeScore=89.1276;InbreedingCoeff=0.9767;MQ=79.46;MQ0=0;MQRankSum=-2.929;QD=25.91;ReadPosRankSum=5.236;VQSLOD=3.2159;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,34:39:96.21:1022,96,0	0/0:4,0:4:6.02:0,6,90	0/0:15,0:16:31.80:0,32,431	0/0:14,0:14:27.09:0,27,402	1/1:5,12:18:38.81:395,39,0	1/1:3,17:20:51.10:543,51,0	1/1:2,19:21:57.12:607,57,0	0/0:26,0:26:61.09:0,61,922	1/1:4,17:23:50.59:503,51,0	1/1:1,19:20:54.10:558,54,0	1/1:0,6:6:18.05:192,18,0	0/0:19,0:19:51.15:0,51,741	0/0:25,0:26:65.63:0,66,877	0/0:17,0:17:45.08:0,45,613	1/1:2,17:19:42.08:447,42,0	1/1:3,13:16:39.07:415,39,0	1/1:4,26:30:72.17:766,72,0	1/1:0,28:28:81.20:862,81,0	0/0:17,0:20:46.62:0,47,620	0/0:10,0:10:24.08:0,24,360	0/0:16,1:19:9.92:0,10,479	0/0:10,0:10:24.08:0,24,366	0/0:17,0:18:38.62:0,39,563	0/0:16,0:17:41.62:0,42,588	0/0:8,0:9:24.07:0,24,333	1/1:3,19:22:57.13:607,57,0	0/0:19,0:21:56.67:0,57,819	1/1:5,11:16:27.06:287,27,0
chr10	36859665	.	T	TGTTTTCGG	20852.36	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-6.193;DP=722;FS=1.812;HRun=0;HaplotypeScore=172.3792;InbreedingCoeff=1.0000;MQ=73.37;MQ0=0;MQRankSum=-18.460;QD=99.30;ReadPosRankSum=0.916;VQSLOD=5.7343;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:13,21:36:81.10:3018,81,0	0/0:14,0:14:39.11:0,39,991	0/0:34,0:33:78.35:0,78,1915	0/0:23,0:22:60.13:0,60,1429	0/0:34,0:34:87.30:0,87,2367	1/1:4,16:22:57.20:2471,57,0	1/1:9,12:24:60.21:2216,60,0	0/0:36,0:36:99:0,99,2681	0/0:29,0:29:84.27:0,84,2217	1/1:13,16:31:87.30:3114,87,0	1/1:8,28:40:99:4022,99,0	0/0:21,0:21:54.16:0,54,1437	0/0:16,0:16:45.15:0,45,1199	0/0:21,0:21:57.19:0,57,1558	1/1:9,30:40:99:4261,102,0	0/0:14,0:14:39.12:0,39,1032	0/0:26,0:26:75.24:0,75,2024	1/1:6,11:17:42.14:1749,42,0	0/0:23,0:23:69.24:0,69,1866	0/0:29,0:29:84.29:0,84,2237	0/0:25,0:25:75.26:0,75,2018	0/0:21,0:21:63.22:0,63,1663	0/0:26,0:26:66.23:0,66,1837	0/0:27,0:27:75.24:0,75,1948	0/0:20,0:20:60.21:0,60,1633	0/0:30,0:30:78.27:0,78,2112	0/0:27,0:27:72.23:0,72,1934	0/0:16,0:16:45.07:0,45,1189
chr10	36861288	.	GCATATATATATATATA	G	1366.91	PASS	AB=1.000;AC=14;AF=0.250;AN=56;BaseQRankSum=4.064;DP=281;FS=7.723;HRun=0;HaplotypeScore=113.7449;InbreedingCoeff=0.5890;MQ=64.82;MQ0=4;MQRankSum=-1.449;QD=16.08;ReadPosRankSum=1.449;VQSLOD=1.8089;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:4,1:6:3.87:25,4,0	0/0:7,0:7:12:0,12,119	0/0:18,0:7:3.13:0,3,71	0/1:17,0:10:12.91:13,0,169	0/0:5,0:5:11.95:0,12,94	1/1:0,9:12:0.75:2,1,0	1/1:9,0:9:14.43:114,14,0	0/0:28,0:27:74.61:0,75,1180	0/0:7,0:7:18:0,18,319	1/1:1,15:17:32.93:921,33,0	0/0:1,0:9:0.94:0,1,1	0/0:6,0:6:17.99:0,18,300	0/0:12,0:12:24.04:0,24,553	0/0:7,0:7:8.99:0,9,75	1/1:0,15:15:3.01:145,3,0	0/0:6,0:6:18.02:0,18,374	0/0:12,0:12:36.11:0,36,1934	1/1:0,4:4:6.02:291,6,0	0/0:10,0:9:27.06:0,27,594	0/0:14,0:15:26.98:0,27,348	0/0:9,0:9:26.95:0,27,221	0/0:7,0:7:11.99:0,12,100	0/0:6,0:6:17.94:0,18,143	0/0:2,0:2:6.01:0,6,195	0/0:8,0:8:18:0,18,223	0/1:5,0:5:11.94:12,0,185	0/0:13,0:13:30.46:0,30,594	0/0:9,0:9:27.08:0,27,1608
chr10	36861289	.	CATATAT	C	1124.86	PASS	AB=1.000;AC=20;AF=0.526;AN=38;BaseQRankSum=3.442;DP=274;FS=7.859;HRun=0;HaplotypeScore=75.2187;InbreedingCoeff=0.4706;MQ=65.11;MQ0=4;MQRankSum=-4.561;QD=8.59;ReadPosRankSum=0.193;VQSLOD=1.0429;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:6,0:6:0.03:0,0,0	1/1:3,4:7:2.97:20,3,0	./.	0/0:17,0:10:6.46:0,6,60	./.	1/1:12,0:12:0.32:1,0,0	./.	1/1:21,0:27:11.85:197,12,0	0/0:7,0:7:3.01:0,3,74	1/1:16,0:16:17.72:231,18,0	0/0:8,0:8:0:0,0,1	0/0:6,0:6:3.01:0,3,75	1/1:5,4:12:12.93:221,13,0	./.	1/1:15,0:15:3.01:42,3,0	0/0:5,0:5:3.01:0,3,50	0/0:13,0:13:30.09:0,30,671	1/1:4,0:4:6.02:83,6,0	1/1:4,1:9:12.04:207,12,0	./.	./.	./.	./.	0/0:2,0:2:3.01:0,3,50	./.	0/0:5,0:5:3.01:0,3,39	1/1:5,5:12:11.72:227,12,0	0/1:9,0:9:24.48:24,0,532
chr10	36862574	.	A	AT	8443.55	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-2.994;DP=813;FS=0.613;HRun=2;HaplotypeScore=77.4900;InbreedingCoeff=0.9996;MQ=90.00;MQ0=0;MQRankSum=-4.555;QD=36.24;ReadPosRankSum=0.800;VQSLOD=5.3143;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,66:71:99:2332,163,0	0/0:13,0:13:39.12:0,39,484	0/0:31,0:31:87.26:0,87,1061	0/0:31,0:31:90.09:0,90,1001	0/0:23,0:23:66.19:0,66,805	1/1:0,27:27:66.22:950,66,0	1/1:1,23:24:60.20:864,60,0	0/0:36,0:36:90.28:0,90,1115	0/0:27,0:27:81.25:0,81,1002	1/1:2,36:38:99:1536,108,0	1/1:1,29:29:84.20:1163,84,0	0/0:25,0:25:69.22:0,69,856	0/0:37,0:37:99:0,111,1350	0/0:21,0:21:63.19:0,63,768	1/1:1,22:23:63.21:907,63,0	0/0:24,0:24:63.18:0,63,767	0/0:30,0:30:84.26:0,84,1041	1/1:1,19:20:48.16:691,48,0	0/0:18,0:18:51.16:0,51,632	0/0:24,0:24:72.23:0,72,892	0/0:46,0:46:99:0,138,1671	0/0:29,0:29:87.27:0,87,1078	0/0:22,0:22:63.20:0,63,780	0/0:38,0:38:96.30:0,96,1190	0/0:30,0:30:90.27:0,90,1104	0/0:40,0:40:99:0,114,1413	0/0:26,0:26:75.24:0,75,930	0/0:9,0:9:24.07:0,24,298
chr10	36863197	.	AG	A	18297.90	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=9.601;DP=691;FS=0.771;HRun=4;HaplotypeScore=120.2322;InbreedingCoeff=0.9586;MQ=89.00;MQ0=0;MQRankSum=-6.344;QD=32.67;ReadPosRankSum=5.162;VQSLOD=3.7676;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,52:52:99:1832,153,0	1/1:0,1:1:3.01:34,3,0	0/0:27,0:27:64.11:0,64,871	0/0:30,0:30:67.19:0,67,885	1/1:1,20:21:60.18:719,60,0	1/1:3,21:24:60.18:718,60,0	1/1:1,29:30:84.26:1007,84,0	1/1:3,26:29:75.21:879,75,0	1/1:2,24:26:68.23:842,68,0	1/1:1,30:31:90.24:1044,90,0	1/1:0,13:13:36.04:414,36,0	0/0:26,0:26:72.23:0,72,989	1/1:1,17:18:51.16:611,51,0	1/1:1,28:29:76.69:932,77,0	1/1:2,33:35:99:1187,99,0	1/1:1,29:30:81.25:971,81,0	1/1:1,25:26:63.19:755,63,0	1/1:1,16:17:42.13:504,42,0	1/1:0,30:30:90.26:1066,90,0	1/1:0,25:25:72.18:847,72,0	1/1:1,39:40:99:1259,105,0	1/1:0,21:21:60.18:719,60,0	0/0:17,0:17:51.17:0,51,707	0/0:31,0:31:90.30:0,90,1259	1/1:0,20:20:54.17:648,54,0	1/1:0,22:21:60.16:697,60,0	1/1:1,12:13:33.10:396,33,0	1/1:0,7:7:18.06:216,18,0
chr10	36863381	.	A	AGT	486.73	PASS	AB=0.940;AC=18;AF=0.346;AN=52;BaseQRankSum=1.258;DP=637;FS=3.291;HRun=0;HaplotypeScore=109.6470;InbreedingCoeff=0.2961;MQ=63.25;MQ0=7;MQRankSum=-0.202;QD=1.62;ReadPosRankSum=-5.153;VQSLOD=0.4678;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:33,8:44:25.71:38,0,26	0/0:6,0:7:5.68:0,6,28	1/1:17,0:13:2.50:9,2,0	./.	0/1:23,0:23:0:0,0,0	0/1:27,0:28:34.08:34,0,58	1/1:19,1:20:3:25,3,0	./.	0/0:17,0:17:5.13:0,5,68	0/1:29,5:36:16.75:99,0,17	1/1:13,7:19:6.02:88,6,0	0/0:21,0:22:10.62:0,11,144	0/1:17,0:18:11.69:12,0,19	0/0:12,0:15:5.27:0,5,27	1/1:20,0:20:9:93,9,0	0/0:29,0:29:17.64:0,18,123	0/0:24,0:24:20.59:0,21,146	0/1:23,0:24:6.12:6,0,66	0/0:18,0:17:0:0,0,0	1/1:17,0:16:2.90:18,3,0	0/0:30,0:30:2.74:0,3,12	0/0:18,0:22:5.68:0,6,28	0/0:19,0:19:5.84:0,6,44	0/0:33,0:34:41.76:0,42,380	0/0:15,0:18:11.36:0,11,56	1/1:32,0:31:24.35:218,24,0	0/0:11,0:20:17.04:0,17,84	0/0:9,0:9:5.68:0,6,28
chr10	36863432	.	GTA	G	1342.88	PASS	AB=0.907;AC=7;AF=0.125;AN=56;BaseQRankSum=0.890;DP=544;FS=1.637;HRun=0;HaplotypeScore=78.3109;InbreedingCoeff=0.2215;MQ=71.41;MQ0=23;MQRankSum=-1.079;QD=12.32;ReadPosRankSum=2.178;VQSLOD=3.0683;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:39:59.83:0,60,502	0/0:8,0:8:22.99:0,23,156	0/0:35,0:17:37.47:0,37,463	0/0:36,0:21:59.82:0,60,573	1/1:16,0:15:32.93:267,33,0	0/0:25,0:25:30.90:0,31,485	0/0:18,0:18:38.67:0,39,303	0/0:19,0:19:54.42:0,54,470	0/1:16,0:16:31.14:205,0,31	0/0:18,0:18:47.98:0,48,576	0/0:14,0:14:21:0,21,205	0/0:17,0:17:25.04:0,25,429	0/0:6,0:6:17.09:0,17,109	0/0:17,0:17:47.04:0,47,353	0/0:20,0:20:41.73:0,42,488	0/1:20,2:22:8.15:344,0,8	0/1:17,2:19:48.12:270,0,48	0/0:17,0:15:30.96:0,31,333	0/0:14,0:14:38.95:0,39,336	0/0:13,0:12:29.29:0,29,226	0/0:16,0:16:41.49:0,41,315	0/0:16,0:16:38.21:0,38,282	0/0:15,0:14:25.08:0,25,264	0/0:29,0:29:67.39:0,67,982	0/0:12,0:12:29.51:0,30,207	0/1:31,0:30:65.77:324,0,66	0/0:30,0:29:56.67:0,57,459	0/1:3,2:4:15.92:69,0,16
chr10	36864119	.	GGT	G	967.81	PASS	AB=0.929;AC=18;AF=0.346;AN=52;BaseQRankSum=3.771;DP=602;FS=18.942;HRun=0;HaplotypeScore=89.4913;InbreedingCoeff=0.2738;MQ=64.64;MQ0=16;MQRankSum=2.125;QD=3.56;ReadPosRankSum=1.804;VQSLOD=0.3080;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:2.58:0,3,12	0/1:18,1:19:11.97:12,0,210	./.	./.	1/1:14,2:18:14.69:119,15,0	0/0:13,0:13:2.99:0,3,26	0/0:31,0:31:11.95:0,12,106	0/0:23,0:22:5.98:0,6,59	1/1:13,5:18:12.03:132,12,0	0/0:18,0:18:8.60:0,9,54	0/0:17,0:17:5.67:0,6,69	0/1:16,2:17:14.90:15,0,204	0/0:16,0:17:0.32:0,0,278	0/0:23,0:23:21.05:0,21,286	0/0:19,0:19:8.49:0,8,49	1/1:10,9:20:20.87:212,21,0	1/1:16,13:28:15.04:165,15,0	0/0:13,0:11:3:0,3,26	0/0:16,0:15:3.01:0,3,45	0/1:21,0:21:12.38:12,0,162	0/1:40,0:39:94.91:95,0,167	0/0:13,0:13:9.03:0,9,135	0/1:11,1:12:20.93:21,0,102	0/1:30,9:40:34.53:35,0,551	0/0:11,0:11:8.86:0,9,102	1/1:16,8:25:24.29:221,24,0	0/0:17,0:18:6.92:0,7,222	1/1:6,6:12:9.02:99,9,0
chr10	36864153	.	T	TGTGTGTGTGTGG	1471.93	PASS	AB=0.630;AC=13;AF=0.232;AN=56;BaseQRankSum=5.108;DP=596;FS=13.171;HRun=0;HaplotypeScore=186.2883;InbreedingCoeff=0.7843;MQ=62.36;MQ0=32;MQRankSum=-2.217;QD=8.81;ReadPosRankSum=-2.184;VQSLOD=1.6467;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:40:3.48:132,3,0	0/0:11,0:11:27.05:0,27,684	0/0:24,0:14:39.07:0,39,413	0/0:45,0:27:59.54:0,60,653	0/0:17,0:17:36.47:0,36,557	1/1:11,0:11:6.92:52,7,0	1/1:9,0:25:15.28:223,15,0	0/0:14,0:13:24.03:0,24,254	0/0:16,0:16:4.65:0,5,413	1/1:8,0:23:38.78:449,39,0	1/1:7,0:14:3.01:44,3,0	0/0:14,0:13:26.68:0,27,600	0/0:18,0:18:42.06:0,42,859	0/0:20,0:20:35.56:0,36,574	1/1:7,1:20:12.51:511,13,0	0/0:19,0:19:32.67:0,33,641	0/0:24,0:22:33.01:0,33,552	0/1:7,0:14:9.71:231,0,10	0/0:22,0:20:39.45:0,39,389	0/0:17,0:17:32.86:0,33,501	0/0:36,0:35:59.82:0,60,760	0/0:13,0:13:23.97:0,24,447	0/0:12,0:12:20.87:0,21,351	0/0:39,0:39:74.22:0,74,1572	0/0:11,0:11:17.99:0,18,193	0/0:17,0:17:29.74:0,30,503	0/0:25,0:25:59.98:0,60,964	0/0:15,0:15:26.96:0,27,410
chr10	36864458	.	C	CA	10153.92	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=17.557;DP=698;FS=4.852;HRun=1;HaplotypeScore=90.0640;InbreedingCoeff=0.9997;MQ=86.75;MQ0=0;MQRankSum=-3.189;QD=39.98;ReadPosRankSum=1.459;VQSLOD=5.3437;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,114,1462	1/1:1,10:11:33.09:455,33,0	0/0:19,0:19:48.11:0,48,555	0/0:29,0:29:80.80:0,81,862	0/0:18,0:18:51.17:0,51,661	0/0:29,0:29:87.28:0,87,1129	0/0:38,0:38:99:0,111,1413	1/1:1,26:27:78.24:1098,78,0	0/0:22,0:22:66.19:0,66,828	0/0:24,0:24:72.21:0,72,892	0/0:16,0:16:45.15:0,45,583	0/0:23,0:23:60.17:0,60,750	1/1:1,20:21:60.20:868,60,0	1/1:1,34:35:93.27:1325,93,0	0/0:26,0:26:72.23:0,72,935	0/0:18,0:18:54.15:0,54,672	0/0:41,0:41:99:0,123,1580	0/0:37,0:37:99:0,105,1362	1/1:1,24:26:75.24:1064,75,0	1/1:0,21:21:63.17:890,63,0	1/1:2,51:53:99:2118,147,0	1/1:0,13:13:33.11:483,33,0	0/0:10,0:10:27.09:0,27,351	0/0:12,0:12:36.12:0,36,467	1/1:1,27:28:75.25:1090,75,0	0/0:29,0:29:78.25:0,78,1012	1/1:2,17:19:54.16:762,54,0	0/0:14,0:14:42.09:0,42,513
chr10	36865634	.	TGTGTGC	T	12406.80	PASS	AB=0.871;AC=43;AF=0.768;AN=56;BaseQRankSum=14.938;DP=976;FS=3.316;HRun=0;HaplotypeScore=269.4086;InbreedingCoeff=0.6823;MQ=58.05;MQ0=4;MQRankSum=-9.432;QD=16.13;ReadPosRankSum=0.971;VQSLOD=4.2762;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:13,22:35:27.09:572,27,0	1/1:14,0:14:9.88:128,10,0	0/0:33,0:18:29.10:0,29,344	0/0:53,0:34:19.60:0,20,391	1/1:43,0:43:33.07:362,33,0	1/1:7,13:20:18.06:355,18,0	0/1:10,17:27:13.90:81,0,14	1/1:48,0:48:99:960,111,0	1/1:35,0:35:35.96:450,36,0	1/1:8,41:49:99:1857,123,0	1/1:2,14:16:21.45:394,21,0	0/0:45,0:44:99:0,104,2698	1/1:33,0:33:42.13:583,42,0	0/1:48,0:46:88.69:408,0,89	1/1:10,30:40:51.15:1077,51,0	1/1:35,0:35:57.15:764,57,0	1/1:25,0:24:20.99:241,21,0	1/1:4,12:15:11.25:201,11,0	1/1:30,0:30:66.01:784,66,0	1/1:30,0:30:31.32:349,31,0	0/1:70,0:69:99:110,0,213	1/1:33,0:33:33:374,33,0	0/0:31,0:31:80.14:0,80,2162	0/0:44,0:44:99:0,111,2883	1/1:31,0:30:38.18:400,38,0	1/1:41,0:41:83.69:959,84,0	1/1:43,0:43:60.08:811,60,0	1/1:7,0:7:15.05:188,15,0
chr10	36865640	.	CGTGTGCGTGTGT	C	19423.01	PASS	AB=0.679;AC=31;AF=0.554;AN=56;BaseQRankSum=5.770;DP=967;FS=9.979;HRun=0;HaplotypeScore=307.4971;InbreedingCoeff=0.7467;MQ=53.99;MQ0=7;MQRankSum=-6.462;QD=31.69;ReadPosRankSum=0.569;VQSLOD=2.4136;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:16.95:0,17,255	1/1:0,11:12:12.65:306,13,0	0/0:31,0:14:28.45:0,28,396	0/0:49,0:27:33.93:0,34,674	1/1:2,39:41:33.04:974,33,0	0/0:15,0:16:7.91:0,8,149	0/0:24,0:24:8.81:0,9,87	1/1:5,50:55:99:1918,109,0	1/1:3,31:36:38.91:1115,39,0	0/1:47,0:48:99:146,0,825	0/0:15,0:16:9.56:0,10,151	0/0:45,0:44:99:0,104,4764	1/1:3,27:30:41.18:1439,41,0	0/1:3,40:41:99:1172,0,166	0/0:35,0:36:41.02:0,41,500	1/1:2,33:37:57.20:1920,57,0	1/1:4,20:23:21.07:578,21,0	0/0:17,0:16:15.31:0,15,310	1/1:3,31:35:91.94:1717,92,0	1/1:4,22:27:33.11:1040,33,0	0/1:15,55:69:99:393,0,495	1/1:5,25:31:33.11:998,33,0	0/0:33,0:32:86.20:0,86,4193	0/0:50,0:50:99:0,132,5961	1/1:4,27:30:37.33:1052,37,0	1/1:3,39:43:99:2171,108,0	1/1:1,38:41:60.21:2042,60,0	1/1:0,6:7:15.05:442,15,0
chr10	36865642	.	TGTGC	T	7909.20	PASS	AB=0.992;AC=39;AF=0.696;AN=56;BaseQRankSum=15.983;DP=959;FS=0.739;HRun=0;HaplotypeScore=259.8000;InbreedingCoeff=0.4196;MQ=52.38;MQ0=8;MQRankSum=-9.758;QD=10.56;ReadPosRankSum=3.747;VQSLOD=3.9996;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:33:4.22:254,0,4	1/1:12,0:12:9.02:86,9,0	0/0:30,0:13:29.18:0,29,324	0/0:50,0:23:21.74:0,22,346	1/1:40,0:40:31.64:191,32,0	0/1:17,0:16:13.46:149,0,13	0/1:23,1:24:23.53:24,0,25	1/1:53,0:53:99:932,118,0	1/1:35,0:35:35.80:330,36,0	0/1:51,1:50:15.29:992,0,15	1/1:16,0:16:21.44:209,21,0	0/0:45,0:44:82.55:0,83,2217	1/1:29,1:30:41.81:420,42,0	0/1:44,0:42:57.39:223,0,57	1/1:37,0:37:19.87:480,20,0	1/1:37,0:37:56.71:528,57,0	1/1:23,0:22:20.84:178,21,0	0/1:18,0:16:72.05:77,0,72	1/1:35,0:35:68.89:630,69,0	1/1:27,0:27:21.30:194,21,0	0/1:68,0:66:80.49:80,0,170	1/1:29,0:29:32.36:233,32,0	0/0:33,0:32:87.09:0,87,1909	0/0:52,0:52:99:0,133,2862	1/1:28,1:28:35.96:278,36,0	1/1:42,0:42:82.63:737,83,0	1/1:41,0:41:59.66:565,60,0	1/1:7,0:7:14.90:118,15,0
chr10	36865646	.	CGT	C	2687	PASS	AB=0.993;AC=35;AF=0.648;AN=54;BaseQRankSum=14.985;DP=938;FS=5.648;HRun=0;HaplotypeScore=253.4131;InbreedingCoeff=0.1020;MQ=50.64;MQ0=9;MQRankSum=-12.657;QD=3.65;ReadPosRankSum=5.087;VQSLOD=2.0543;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:32,0:32:48.53:49,0,148	0/1:12,0:12:8.80:36,0,9	1/1:28,0:10:0.89:2,1,0	./.	1/1:39,0:39:23.99:149,24,0	0/1:18,0:17:36.41:36,0,38	0/0:22,0:22:8.86:0,9,101	0/1:52,0:52:47.68:48,0,94	1/1:33,0:33:29.32:161,29,0	0/1:55,0:52:99:147,0,225	1/1:17,0:17:15.58:63,16,0	0/0:39,3:42:42.66:0,43,1209	1/1:28,0:28:39.85:216,40,0	0/1:43,0:41:49.81:172,0,50	0/1:35,0:35:27.45:101,0,27	1/1:35,0:35:52.61:302,53,0	1/1:22,0:21:15.28:85,15,0	0/1:18,0:16:8.09:8,0,112	0/1:34,0:34:6.70:137,0,7	1/1:25,0:26:32.23:197,32,0	0/1:64,0:62:56.44:56,0,176	1/1:28,0:28:29.21:176,29,0	0/0:30,4:33:11.96:0,12,1091	0/0:53,0:53:76.57:0,77,1615	1/1:28,0:28:30.14:164,30,0	0/1:41,0:42:34.50:183,0,34	1/1:39,0:40:55.18:304,55,0	1/1:7,0:7:10.57:70,11,0
chr10	36865942	.	A	AGT	8248.45	PASS	AB=0.703;AC=18;AF=0.321;AN=56;BaseQRankSum=-14.167;DP=1079;FS=1.730;HRun=0;HaplotypeScore=196.1149;InbreedingCoeff=0.6623;MQ=62.17;MQ0=15;MQRankSum=0.450;QD=21.42;ReadPosRankSum=-0.580;VQSLOD=5.1506;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:67,0:68:99:0,153,1853	1/1:0,12:14:21.05:341,21,0	0/0:56,0:22:0.77:0,1,138	0/0:89,0:50:52.13:0,52,465	0/0:22,0:21:39.12:0,39,476	0/0:34,0:34:84.10:0,84,999	0/0:35,0:35:75.15:0,75,875	1/1:17,31:48:56.57:1286,57,0	0/0:39,0:41:99:0,108,1233	0/0:45,0:44:99:0,111,1336	0/0:19,0:19:45.14:0,45,549	0/0:39,0:40:99:0,108,1280	0/1:15,25:41:3.31:954,0,3	1/1:4,32:37:33.51:1178,34,0	0/0:50,0:52:99:0,136,1592	0/0:38,0:38:99:0,99,1196	0/1:40,1:43:8.65:9,0,943	0/0:37,0:37:54.59:0,55,755	0/1:9,12:20:67.67:403,0,68	0/1:9,22:31:24.80:613,0,25	1/1:20,55:72:21.91:1359,22,0	1/1:3,26:31:59.72:950,60,0	0/0:25,0:27:35.91:0,36,667	0/0:52,0:55:99:0,150,1732	1/1:5,10:15:11.67:194,12,0	0/0:30,0:31:78.07:0,78,921	1/1:5,23:29:29.56:963,30,0	0/0:4,0:4:9.03:0,9,110
chr10	36866615	.	AACACACACACACACACACACACACAC	A	1772.47	PASS	AC=14;AF=0.259;AN=54;BaseQRankSum=2.419;DP=601;FS=0.000;HRun=0;HaplotypeScore=265.1830;InbreedingCoeff=0.7106;MQ=54.95;MQ0=64;MQRankSum=-3.323;QD=10.68;ReadPosRankSum=-3.441;VQSLOD=1.7203;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:25,35:59:15.05:363,15,0	0/0:1,0:2:3.01:0,3,108	./.	0/0:58,0:14:2.19:0,2,6	0/0:7,0:9:9.03:0,9,569	1/1:5,10:15:9.03:277,9,0	1/1:29,0:28:15.05:469,15,0	0/0:21,0:21:27.04:0,27,818	0/0:22,0:29:27.56:0,28,1628	1/1:7,7:12:3.15:302,3,0	1/1:1,8:9:6.02:151,6,0	0/0:17,0:18:30.06:0,30,1877	0/0:6,0:14:20.96:0,21,564	0/0:15,0:19:12.51:0,13,300	1/1:3,17:20:6.02:150,6,0	0/0:14,0:15:18.06:0,18,1104	0/0:15,0:16:33.11:0,33,2324	1/1:19,0:13:0.03:222,0,0	0/0:14,0:11:15.01:0,15,510	0/0:10,0:10:3.01:0,3,73	0/0:51,0:37:24.44:0,24,661	0/0:3,0:4:6.02:0,6,111	0/0:8,0:8:6.45:0,6,525	0/0:44,0:45:60.68:0,61,4325	0/0:6,0:13:24.08:0,24,853	0/0:13,0:17:33.07:0,33,2058	0/0:10,0:14:12.04:0,12,332	0/0:5,0:10:18.06:0,18,1266
chr10	36866785	.	A	AAAATAAATAAAT	7660.16	PASS	AC=42;AF=0.808;AN=52;BaseQRankSum=2.459;DP=346;FS=4.439;HRun=0;HaplotypeScore=116.1133;InbreedingCoeff=0.4986;MQ=78.41;MQ0=2;MQRankSum=-4.384;QD=26.78;ReadPosRankSum=-2.086;VQSLOD=3.3951;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:10,4:15:12.04:642,12,0	1/1:12,0:12:9.03:317,9,0	0/0:16,0:15:2.68:0,3,11	0/0:15,0:13:6.01:0,6,98	1/1:10,0:10:3.01:122,3,0	1/1:11,5:19:9.03:525,9,0	./.	1/1:41,0:36:57.18:1534,57,0	1/1:11,0:11:9.03:395,9,0	1/1:13,0:15:9.02:205,9,0	1/1:6,2:8:9.03:496,9,0	0/0:9,0:9:18.06:0,18,604	./.	1/1:6,0:6:3.01:93,3,0	1/1:7,1:8:6.02:350,6,0	1/1:6,0:6:3:25,3,0	1/1:18,0:18:15.02:577,15,0	1/1:13,4:18:15.05:771,15,0	1/1:15,0:14:3.01:136,3,0	1/1:18,0:18:3.01:137,3,0	1/1:8,0:8:3.01:131,3,0	1/1:12,0:12:3.01:137,3,0	0/0:6,0:6:9.03:0,9,310	0/0:5,0:5:6.02:0,6,207	1/1:14,0:14:6.02:278,6,0	1/1:11,0:12:6.02:193,6,0	1/1:11,0:11:3.01:137,3,0	1/1:8,0:8:9.03:461,9,0
chr10	36866792	.	A	ATAAATAAATAAATAAATAAT	11683.75	PASS	AB=1.000;AC=31;AF=0.554;AN=56;BaseQRankSum=3.666;DP=327;FS=9.833;HRun=0;HaplotypeScore=151.4934;InbreedingCoeff=-0.0132;MQ=69.28;MQ0=2;MQRankSum=-4.011;QD=42.33;ReadPosRankSum=0.439;VQSLOD=3.4391;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:17,0:17:65.79:439,0,66	1/1:11,0:11:23.92:673,24,0	0/0:13,0:12:5.94:0,6,41	0/0:13,0:10:9.02:0,9,176	0/1:11,0:11:73.92:85,0,74	0/1:18,0:18:43.93:263,0,44	0/0:1,0:1:2.99:0,3,24	1/1:43,0:38:78.19:2234,78,0	0/1:10,0:10:56.59:511,0,57	0/1:13,0:13:56.55:104,0,57	0/1:7,0:7:26.88:279,0,27	0/0:10,0:10:26.99:0,27,966	1/1:5,0:5:3:25,3,0	1/1:6,0:6:5.95:128,6,0	0/1:6,0:6:63.67:177,0,64	0/0:4,0:4:0.89:0,1,2	0/1:20,0:20:99:889,0,119	0/1:18,0:17:52.90:437,0,53	1/1:5,9:26:69.04:2939,69,0	1/1:16,0:16:3.01:263,3,0	1/1:5,0:5:5.98:276,6,0	1/1:5,0:5:3.01:263,3,0	0/0:6,0:6:9.03:0,9,485	0/0:4,0:4:9.01:0,9,345	1/1:11,0:11:6.02:530,6,0	0/1:9,0:9:51.03:222,0,51	1/1:11,0:11:3.01:263,3,0	0/1:7,0:7:8.96:685,0,9
chr10	36866800	.	A	ATAAATAAATAATTAAATAAT	14661.24	PASS	AB=1.000;AC=36;AF=0.643;AN=56;BaseQRankSum=2.788;DP=322;FS=0.578;HRun=0;HaplotypeScore=141.6937;InbreedingCoeff=0.2304;MQ=55.87;MQ0=2;MQRankSum=-5.689;QD=51.62;ReadPosRankSum=4.475;VQSLOD=4.2765;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:20,0:20:99:346,0,232	1/1:10,0:10:27.06:1059,27,0	0/0:8,0:7:10.56:0,11,106	0/0:8,0:5:9.02:0,9,173	1/1:11,0:11:23.46:486,23,0	0/1:16,0:16:99:331,0,100	0/0:2,0:2:6.01:0,6,76	1/1:43,0:38:96.21:2877,96,0	0/1:9,0:9:30.74:527,0,31	0/1:13,0:13:99:124,0,189	0/1:7,0:7:58.86:307,0,59	0/0:11,0:11:27.01:0,27,1059	1/1:3,0:3:6:74,6,0	1/1:5,0:5:9.02:187,9,0	0/1:7,0:7:99:135,0,169	1/1:3,0:3:2.99:23,3,0	1/1:20,0:20:26.98:1467,27,0	0/1:21,0:20:99:487,0,117	1/1:20,1:20:57.16:2708,57,0	1/1:3,1:18:5.97:302,6,0	1/1:5,0:5:9.02:338,9,0	1/1:1,1:2:3.01:283,3,0	0/0:4,0:4:12.03:0,12,519	0/0:5,0:5:9.01:0,9,351	1/1:1,3:17:6.02:566,6,0	0/1:11,0:11:2.93:786,0,3	1/1:3,1:14:3.48:284,3,0	1/1:1,0:8:12.04:964,12,0
chr10	36869386	.	TGA	T	2984.49	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-3.289;DP=480;FS=3.349;HRun=0;HaplotypeScore=149.4770;InbreedingCoeff=0.9749;MQ=85.28;MQ0=0;MQRankSum=2.381;QD=32.80;ReadPosRankSum=0.484;VQSLOD=5.4223;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:37:24.34:0,24,352	0/0:3,0:3:8.89:0,9,87	0/0:31,0:28:54.26:0,54,828	0/0:25,0:23:43.83:0,44,703	1/1:7,15:21:48.15:666,48,0	0/0:16,0:16:14.93:0,15,295	0/0:20,0:20:30.08:0,30,379	0/0:19,0:18:35.70:0,36,386	1/1:0,10:10:27.09:386,27,0	0/0:17,0:17:41.81:0,42,387	0/0:12,0:12:14.91:0,15,175	0/0:14,0:14:42.13:0,42,715	0/0:17,0:17:24.05:0,24,291	0/0:14,0:14:27.07:0,27,330	0/0:22,0:22:19.50:0,19,307	1/1:0,12:12:33.07:449,33,0	1/1:9,12:21:57.09:718,57,0	0/0:9,0:9:23.68:0,24,255	0/0:16,0:16:40.16:0,40,340	0/0:14,0:14:35.81:0,36,332	0/0:21,0:21:16.47:0,16,191	0/0:17,0:17:31.07:0,31,317	0/0:11,0:11:27.09:0,27,476	0/0:14,0:14:42.13:0,42,711	0/0:16,0:16:28:0,28,343	1/1:3,15:17:48.14:655,48,0	0/0:22,0:22:47.41:0,47,493	1/1:2,6:8:21.07:298,21,0
chr10	36869390	.	AG	A	1014.64	PASS	AB=0.804;AC=31;AF=0.554;AN=56;BaseQRankSum=1.350;DP=471;FS=5.704;HRun=8;HaplotypeScore=152.4155;InbreedingCoeff=0.1603;MQ=82.25;MQ0=0;MQRankSum=-2.428;QD=2.86;ReadPosRankSum=3.172;VQSLOD=0.0079;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:27,7:33:7.58:60,0,8	0/1:1,2:3:2.20:23,0,2	0/0:29,0:25:52.92:0,53,556	0/0:26,0:24:47.23:0,47,472	1/1:19,0:18:8.15:20,8,0	0/1:11,5:16:8.07:8,0,19	0/1:15,4:19:3.65:4,0,19	0/1:21,0:20:4.57:124,0,5	0/0:15,0:15:6.62:0,7,88	1/1:11,5:16:5.26:169,5,0	0/1:4,8:12:1.36:1,0,8	0/0:17,0:17:48.13:0,48,559	0/1:14,2:16:10.88:11,0,21	0/1:7,5:12:2.39:32,0,2	0/1:20,2:22:6.96:40,0,7	1/1:12,0:12:4.71:11,5,0	0/1:20,0:20:6.27:6,0,11	0/1:5,3:8:7.92:69,0,8	1/1:6,8:14:7.56:176,8,0	1/1:10,3:13:9.02:67,9,0	1/1:17,4:21:3.01:51,3,0	1/1:8,8:16:2.26:95,2,0	0/0:12,0:12:30.09:0,30,360	0/0:15,0:15:42.13:0,42,506	0/1:4,9:13:7.75:75,0,8	1/1:19,0:18:5.49:13,5,0	1/1:10,11:21:8.97:123,9,0	0/1:8,0:8:0.19:0,0,19
chr10	36869396	.	G	GGAGGGA	15114.71	PASS	AB=0.714;AC=33;AF=0.589;AN=56;BaseQRankSum=4.476;DP=494;FS=13.290;HRun=0;HaplotypeScore=153.9825;InbreedingCoeff=0.8966;MQ=79.75;MQ0=3;MQRankSum=-12.231;QD=52.85;ReadPosRankSum=0.624;VQSLOD=4.4972;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,22:34:9.47:965,9,0	1/1:3,0:3:9.03:240,9,0	0/0:37,0:27:65.11:0,65,905	0/0:39,0:27:37.84:0,38,631	0/0:18,0:17:34.07:0,34,740	1/1:6,11:19:36.12:1211,36,0	1/1:9,10:22:36.12:1115,36,0	1/1:10,9:28:67.44:1583,67,0	0/0:15,0:15:38.52:0,39,770	1/1:6,7:13:36.11:1042,36,0	1/1:9,3:12:10.53:418,11,0	0/0:17,0:17:51.15:0,51,1003	1/1:2,11:15:21.07:736,21,0	1/1:7,5:12:24.08:840,24,0	1/1:3,19:24:39.07:1182,39,0	0/0:12,0:12:26.46:0,26,535	0/0:15,0:15:30.93:0,31,660	0/1:6,4:10:33.36:584,0,33	1/1:13,3:16:42.98:932,43,0	1/1:3,5:10:18.05:554,18,0	1/1:6,12:19:18.02:610,18,0	1/1:9,4:13:27.07:667,27,0	0/0:12,0:12:33.05:0,33,594	0/0:16,0:16:48.15:0,48,890	1/1:11,2:13:30.09:840,30,0	0/0:18,0:17:42.77:0,43,858	1/1:11,8:21:49.41:1596,49,0	0/0:9,0:9:11.79:0,12,496
chr10	36869408	.	GGAGATAGAGAGA	G	11499.59	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=7.800;DP=479;FS=27.270;HRun=0;HaplotypeScore=217.1898;InbreedingCoeff=0.9739;MQ=76.36;MQ0=9;MQRankSum=-12.166;QD=52.75;ReadPosRankSum=2.650;VQSLOD=2.9581;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:16,6:22:16.59:834,17,0	1/1:1,2:3:6.02:153,6,0	0/0:57,0:38:69.58:0,70,950	0/0:61,0:34:29.87:0,30,764	0/0:24,0:24:42.13:0,42,1562	1/1:11,5:16:34.93:995,35,0	1/1:7,7:14:35.48:873,35,0	1/1:23,2:22:55.05:961,55,0	0/0:15,0:15:42.14:0,42,1465	1/1:5,5:10:27.09:788,27,0	1/1:7,3:10:13.76:309,14,0	0/0:17,0:17:45.15:0,45,1876	1/1:7,2:9:21.07:599,21,0	1/1:5,5:10:24.08:644,24,0	1/1:15,2:17:39.13:990,39,0	0/0:11,0:11:33.09:0,33,1208	0/0:16,0:16:42.14:0,42,1495	1/1:9,2:11:24.39:511,24,0	1/1:13,2:15:27.82:538,28,0	1/1:3,3:6:15.05:435,15,0	1/1:9,4:13:17.81:465,18,0	1/1:8,3:11:18.06:490,18,0	0/0:10,0:10:27.09:0,27,905	0/0:16,0:16:35.93:0,36,1563	1/1:4,6:10:26.98:613,27,0	0/0:21,0:21:57.19:0,57,1991	1/1:6,10:16:46.40:1302,46,0	0/0:11,0:11:33.11:0,33,1023
chr10	36869430	.	GAT	G	1914.24	PASS	AB=0.883;AC=32;AF=0.571;AN=56;BaseQRankSum=10.371;DP=501;FS=10.881;HRun=0;HaplotypeScore=180.0219;InbreedingCoeff=0.7854;MQ=68.98;MQ0=22;MQRankSum=-8.153;QD=11.33;ReadPosRankSum=1.325;VQSLOD=2.6324;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,3:16:19.35:178,19,0	1/1:3,0:3:2.90:16,3,0	0/0:79,0:33:59.08:0,59,752	0/0:103,1:34:55.80:0,56,640	0/0:27,0:27:36.03:0,36,555	1/1:12,3:16:32.53:280,33,0	1/1:10,0:12:8.62:74,9,0	1/1:11,2:11:19.10:142,19,0	0/0:16,0:16:27.63:0,28,638	1/1:6,1:8:17.75:232,18,0	1/1:4,0:6:2.80:13,3,0	0/0:22,0:22:18.14:0,18,915	1/1:6,1:8:14.44:124,14,0	1/1:7,0:8:11.63:87,12,0	1/1:7,2:11:24.17:237,24,0	0/0:14,0:14:31.29:0,31,500	0/0:15,1:16:33.89:0,34,542	1/1:5,3:8:17.86:189,18,0	1/1:4,2:6:17.60:178,18,0	0/1:5,0:6:5.04:12,0,5	0/1:9,1:10:0.01:0,0,0	1/1:5,1:9:0.69:33,1,0	0/0:11,0:11:27.09:0,27,514	0/0:15,1:16:39.10:0,39,672	1/1:9,0:11:0.41:19,0,0	0/0:16,0:16:47.55:0,48,684	1/1:15,1:16:33.16:306,33,0	0/0:9,0:9:23.20:0,23,318
chr10	36869441	.	A	AAG	1180.52	PASS	AB=0.946;AC=12;AF=0.214;AN=56;BaseQRankSum=8.226;DP=533;FS=21.058;HRun=0;HaplotypeScore=186.3129;InbreedingCoeff=-0.3165;MQ=60.92;MQ0=28;MQRankSum=-4.957;QD=8.43;ReadPosRankSum=2.810;VQSLOD=2.0297;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:17,1:19:99:151,0,221	0/0:3,0:3:3.01:0,3,43	0/0:79,0:27:17.33:0,17,478	0/0:114,0:30:40.78:0,41,543	0/0:30,0:31:27.07:0,27,435	0/1:14,1:16:99:148,0,157	0/1:11,1:12:59.36:84,0,59	0/0:10,0:8:8.97:0,9,143	0/0:14,0:14:36.02:0,36,544	0/1:11,0:11:99:110,0,157	0/0:6,0:6:2.05:0,2,12	0/0:24,0:24:66.14:0,66,971	0/1:8,0:8:40.55:41,0,45	0/1:8,0:8:23.22:23,0,96	0/1:9,4:13:99:290,0,151	0/0:16,0:15:36.10:0,36,544	0/0:16,0:16:26.23:0,26,446	0/1:7,3:10:30.02:219,0,30	0/1:11,0:7:75.74:76,0,98	0/1:6,0:6:10.90:11,0,59	0/0:8,0:8:1.74:0,2,43	0/1:8,0:8:28.56:29,0,58	0/0:12,0:12:33.08:0,33,469	0/0:17,0:17:39.13:0,39,622	0/0:13,0:13:0.78:0,1,134	0/0:14,0:14:39.13:0,39,618	0/1:18,0:18:99:144,0,150	0/0:12,0:13:29.60:0,30,384
chr10	36869446	.	GGAGA	G	1020.02	PASS	AB=0.741;AC=7;AF=0.125;AN=56;BaseQRankSum=-0.688;DP=551;FS=18.737;HRun=0;HaplotypeScore=204.6024;InbreedingCoeff=-0.1794;MQ=55.89;MQ0=26;MQRankSum=-3.517;QD=8.29;ReadPosRankSum=-2.386;VQSLOD=1.4482;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:21:32.75:0,33,406	0/0:4,0:4:6.02:0,6,77	0/0:78,0:23:9.59:0,10,308	0/0:108,0:27:4.49:0,4,183	0/1:15,20:35:99:191,0,470	0/0:15,0:18:32.28:0,32,379	0/0:8,0:12:15.04:0,15,186	0/0:14,0:11:21.45:0,21,226	0/1:12,3:15:99:113,0,347	0/0:8,0:12:21.06:0,21,294	0/0:7,0:7:8.72:0,9,104	0/0:24,0:24:57.03:0,57,1349	0/0:8,0:9:13.99:0,14,112	0/0:8,0:9:12.04:0,12,170	0/0:12,0:14:29.65:0,30,302	0/1:10,8:17:99:314,0,277	0/1:9,8:17:64.89:65,0,405	0/0:12,0:12:4.51:0,5,167	0/1:10,1:8:9.37:9,0,185	0/0:3,0:6:6.02:0,6,84	0/0:9,0:10:6:0,6,75	0/0:6,0:9:9.02:0,9,121	0/0:10,0:10:18.06:0,18,433	0/0:16,0:16:36.12:0,36,889	0/0:12,0:14:20.90:0,21,241	0/1:11,3:14:99:181,0,368	0/0:13,0:19:27.02:0,27,377	0/1:6,6:12:99:274,0,125
chr10	36870939	.	TG	T	16942.50	PASS	AB=1.000;AC=55;AF=0.982;AN=56;BaseQRankSum=0.007;DP=645;FS=0.000;HRun=2;HaplotypeScore=135.5005;InbreedingCoeff=-0.0237;MQ=81.91;MQ0=0;MQRankSum=-3.685;QD=26.27;ReadPosRankSum=4.633;VQSLOD=4.4867;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,42:42:99:1335,117,0	1/1:6,0:6:9.03:102,9,0	1/1:20,0:20:38.61:215,39,0	0/1:18,0:18:99:129,0,100	1/1:4,15:19:51.13:571,51,0	1/1:3,11:14:33.09:377,33,0	1/1:1,26:27:75.21:856,75,0	1/1:2,18:20:54.09:583,54,0	1/1:3,19:22:57.15:641,57,0	1/1:3,20:24:63.18:718,63,0	1/1:2,7:9:21.06:239,21,0	1/1:29,0:29:14.62:190,15,0	1/1:1,30:31:90.26:1027,90,0	1/1:1,24:26:69.20:787,69,0	1/1:2,30:32:78.20:889,78,0	1/1:1,16:17:48.14:548,48,0	1/1:3,25:28:75.20:845,75,0	1/1:0,26:26:78.22:890,78,0	1/1:1,25:26:75.21:857,75,0	1/1:1,14:15:42.12:479,42,0	1/1:4,26:30:75.21:856,75,0	1/1:5,22:27:63.18:719,63,0	1/1:15,0:15:10.24:165,10,0	1/1:35,0:35:85.10:357,85,0	1/1:1,16:17:45.13:513,45,0	1/1:2,32:34:90.26:1026,90,0	1/1:4,28:32:78.22:890,78,0	1/1:0,4:4:12.03:137,12,0
chr10	36871022	.	GAAGT	G	3679.78	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=4.603;DP=560;FS=14.477;HRun=0;HaplotypeScore=147.3816;InbreedingCoeff=0.9917;MQ=87.50;MQ0=0;MQRankSum=-6.492;QD=40.44;ReadPosRankSum=4.321;VQSLOD=3.4702;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,111,2620	0/0:7,0:7:18.06:0,18,471	0/0:27,0:27:60.20:0,60,1343	0/0:24,0:24:60.21:0,60,1406	1/1:3,17:20:30.10:503,30,0	0/0:13,0:13:36.12:0,36,897	0/0:28,0:28:78.27:0,78,2042	0/0:18,0:18:36.12:0,36,866	1/1:2,19:21:57.20:1027,57,0	0/0:23,0:23:57.20:0,57,1462	0/0:14,0:14:39.13:0,39,945	0/0:23,0:23:63.22:0,63,1615	0/0:22,0:22:60.21:0,60,1570	0/0:28,0:28:72.25:0,72,1854	0/0:22,0:22:57.20:0,57,1468	1/1:2,16:18:45.09:751,45,0	1/1:3,13:16:39.13:690,39,0	0/0:23,0:23:60.20:0,60,1517	0/0:30,0:30:78.27:0,78,2006	0/0:14,0:14:39.13:0,39,995	0/0:20,0:20:55.42:0,55,1302	0/0:20,0:20:45.15:0,45,1143	0/0:15,0:15:39.13:0,39,1015	0/0:24,0:24:60.16:0,60,1489	0/0:18,0:18:42.14:0,42,1055	1/1:2,9:11:27.09:491,27,0	0/0:17,0:17:45.15:0,45,1144	1/1:0,5:5:12.04:218,12,0
chr10	36871188	.	C	CA	7047.25	PASS	AB=0.952;AC=47;AF=0.839;AN=56;BaseQRankSum=2.277;DP=450;FS=0.637;HRun=0;HaplotypeScore=125.0939;InbreedingCoeff=0.6898;MQ=53.75;MQ0=8;MQRankSum=-6.729;QD=17.27;ReadPosRankSum=1.105;VQSLOD=7.0206;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,13:14:20.75:278,21,0	1/1:1,3:2:5.81:50,6,0	0/0:14,0:9:3.48:0,3,211	0/1:17,1:16:12.60:13,0,266	1/1:4,2:6:6.02:95,6,0	1/1:4,4:6:10.37:113,10,0	1/1:6,25:27:56.52:760,57,0	1/1:0,15:12:27.06:403,27,0	1/1:6,5:10:13.29:248,13,0	1/1:8,14:19:35.66:391,36,0	1/1:5,7:13:10.25:163,10,0	0/0:8,0:8:21.06:0,21,274	1/1:10,14:20:36.37:350,36,0	1/1:13,29:40:64:850,64,0	1/1:10,8:17:38:442,38,0	1/1:4,5:7:11.87:154,12,0	1/1:6,6:11:17.38:183,17,0	1/1:7,8:13:23.84:310,24,0	1/1:3,8:10:26.37:350,26,0	1/1:2,11:9:15.02:202,15,0	1/1:10,38:40:31.93:446,32,0	1/1:4,14:19:19.82:199,20,0	0/0:3,0:3:9.03:0,9,121	0/0:17,0:16:44.81:0,45,540	1/1:11,10:19:17.92:315,18,0	1/1:7,10:15:33.18:465,33,0	1/1:4,5:10:20.08:219,20,0	1/1:0,1:1:3.01:48,3,0
chr10	36871198	.	A	AG	1038.21	PASS	AB=0.973;AC=17;AF=0.304;AN=56;BaseQRankSum=7.736;DP=482;FS=9.566;HRun=4;HaplotypeScore=153.9291;InbreedingCoeff=-0.3453;MQ=51.88;MQ0=10;MQRankSum=-7.953;QD=3.57;ReadPosRankSum=0.263;VQSLOD=-0.4832;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:21,0:18:8.92:9,0,292	1/1:7,0:5:9:81,9,0	0/0:13,0:8:2.76:0,3,78	0/0:17,0:11:5.08:0,5,93	0/0:7,0:7:9.03:0,9,102	0/1:10,0:7:31.60:32,0,87	0/0:31,2:29:9.91:0,10,532	0/0:15,0:12:24.07:0,24,271	0/0:10,0:9:0.33:0,0,180	0/1:26,0:23:99:100,0,223	0/0:13,1:14:8.65:0,9,102	0/0:11,0:11:27.06:0,27,293	0/1:27,1:24:99:182,0,209	0/1:39,2:39:99:194,0,355	0/1:22,3:21:99:156,0,161	0/1:13,0:11:10.45:10,0,151	0/1:14,0:13:46.40:50,0,46	0/1:16,0:14:20.60:21,0,229	0/1:12,0:10:79.32:79,0,143	0/1:13,3:12:22.98:23,0,121	0/0:52,0:41:11.30:0,11,313	0/1:16,0:16:7.83:8,0,120	0/0:3,0:3:9.03:0,9,102	0/0:15,0:15:36.10:0,36,407	0/1:21,0:18:99:129,0,160	0/1:16,1:15:99:106,0,233	0/1:8,0:7:12.81:13,0,115	0/0:1,0:1:3.01:0,3,34
chr10	36871201	.	G	GA	1867.50	PASS	AB=0.826;AC=18;AF=0.321;AN=56;BaseQRankSum=8.196;DP=479;FS=9.362;HRun=0;HaplotypeScore=136.7519;InbreedingCoeff=-0.4824;MQ=50.92;MQ0=8;MQRankSum=-8.228;QD=6.12;ReadPosRankSum=-0.174;VQSLOD=2.7226;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:21,3:21:40.74:41,0,422	0/1:4,3:5:24.94:128,0,25	0/0:13,0:8:4.16:0,4,121	0/1:15,0:9:7.72:8,0,126	0/0:6,1:7:12.03:0,12,151	0/1:9,2:8:75.84:76,0,147	0/0:30,1:27:15.36:0,15,734	0/0:15,0:12:24.08:0,24,334	0/1:10,1:10:18.34:18,0,209	0/1:16,7:20:99:224,0,325	0/1:6,5:11:1.13:1,0,135	0/0:11,0:11:30.09:0,30,403	0/1:21,8:26:99:268,0,369	0/1:31,7:36:99:293,0,561	0/1:18,6:20:99:168,0,257	0/1:12,1:11:22.43:22,0,219	0/1:10,2:11:99:116,0,111	0/1:13,3:14:62.53:63,0,312	0/1:9,4:11:99:160,0,204	0/0:16,2:14:11.42:0,11,223	0/0:49,10:48:20.56:0,21,433	0/1:10,3:13:26.58:27,0,152	0/0:4,0:4:12.02:0,12,146	0/0:14,0:14:42.10:0,42,551	0/1:12,9:18:99:236,0,218	0/1:14,3:15:99:143,0,297	0/1:6,1:6:30.72:31,0,146	0/0:1,0:1:3.01:0,3,42
chr10	36871230	.	G	GA	300.16	PASS	AB=0.956;AC=16;AF=0.286;AN=56;BaseQRankSum=4.707;DP=336;FS=28.288;HRun=0;HaplotypeScore=88.5713;InbreedingCoeff=-0.3507;MQ=52.40;MQ0=12;MQRankSum=-4.493;QD=1.49;ReadPosRankSum=-3.524;VQSLOD=-0.6057;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,1:20:32.09:0,32,403	0/1:5,0:5:18.51:19,0,111	0/0:13,0:3:9:0,9,91	0/1:22,0:12:3.42:3,0,149	0/0:4,0:4:12.04:0,12,168	0/1:7,0:6:3.24:3,0,92	0/0:28,1:26:4.55:0,5,830	0/1:12,0:10:3.30:3,0,188	0/1:4,2:6:91.97:92,0,107	0/0:16,0:14:14.06:0,14,441	0/1:3,1:4:21.66:22,0,114	0/0:9,0:9:24.08:0,24,332	0/1:19,2:20:99:133,0,414	0/1:20,0:20:13.81:14,0,381	0/1:9,1:8:35.52:36,0,113	0/0:5,0:5:8.99:0,9,103	0/1:10,0:9:5.18:5,0,155	0/1:12,1:13:41.91:42,0,222	0/0:11,0:10:21.05:0,21,272	0/1:7,0:7:0.14:0,0,144	0/1:44,0:37:8.13:8,0,408	0/1:5,0:5:0.13:0,0,71	0/0:5,0:5:15.05:0,15,210	0/0:12,0:12:36.08:0,36,448	0/1:11,0:9:48.51:49,0,108	0/0:6,0:5:12.02:0,12,149	0/1:5,0:4:9:9,0,113	0/0:1,0:1:3.01:0,3,42
chr10	36871288	.	G	GA	298.01	PASS	AB=0.848;AC=11;AF=0.239;AN=46;BaseQRankSum=1.804;DP=176;FS=18.263;HRun=0;HaplotypeScore=47.3431;InbreedingCoeff=-0.1315;MQ=65.56;MQ0=7;MQRankSum=-3.525;QD=2.98;ReadPosRankSum=0.925;VQSLOD=1.1227;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:4,1:4:7.23:7,0,74	./.	0/1:20,0:11:24.05:24,0,177	0/1:19,0:13:31.88:32,0,178	0/0:2,1:3:0.47:0,0,1	./.	0/0:5,0:4:8.99:0,9,104	0/0:5,1:4:8.62:0,9,111	1/1:3,1:3:3.01:48,3,0	0/0:5,0:4:8.05:0,8,77	./.	0/0:12,0:12:35.98:0,36,426	0/0:7,0:3:8.98:0,9,88	0/1:7,2:9:66.54:67,0,207	0/1:3,1:3:38.62:39,0,75	0/1:3,2:5:24.18:55,0,24	0/0:2,0:2:6.02:0,6,81	0/0:6,0:6:15.05:0,15,208	0/0:7,0:2:5.91:0,6,58	0/0:1,1:2:3.01:0,3,42	0/1:17,3:16:89.63:90,0,225	./.	0/1:7,1:8:23.84:24,0,238	0/0:10,0:10:21.06:0,21,274	0/0:2,1:3:6.01:0,6,69	0/1:3,1:4:2.68:42,0,3	0/0:4,0:3:9.03:0,9,126	./.
chr10	36871297	.	G	GA	30.20	PASS	AB=0.935;AC=7;AF=0.146;AN=48;BaseQRankSum=3.771;DP=205;FS=6.648;HRun=0;HaplotypeScore=56.0179;InbreedingCoeff=0.1145;MQ=65.36;MQ0=8;MQRankSum=-2.322;QD=0.66;ReadPosRankSum=-1.301;VQSLOD=0.3772;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:7:12.03:0,12,150	0/0:2,0:1:3.01:0,3,42	0/0:22,0:13:19.74:0,20,251	0/0:17,0:12:6.12:0,6,229	0/1:3,0:3:0:0,0,0	./.	0/0:8,0:7:15.01:0,15,187	0/1:7,1:6:4.99:5,0,152	0/0:4,0:3:3.01:0,3,32	0/0:5,0:4:11.91:0,12,141	./.	0/0:14,0:14:39.09:0,39,489	0/0:7,0:3:9.03:0,9,126	0/0:11,0:11:3.59:0,4,246	0/1:6,1:6:31.49:31,0,131	1/1:6,0:5:8.92:63,9,0	0/0:3,0:3:3.01:0,3,42	0/0:9,0:9:27.05:0,27,351	0/0:9,0:3:6.02:0,6,84	0/1:2,0:2:4.51:5,0,36	0/1:18,2:17:34.73:35,0,368	./.	0/0:11,0:11:33.09:0,33,418	0/0:13,0:13:36.12:0,36,500	0/0:3,0:3:9.02:0,9,111	0/0:3,0:3:3.01:0,3,42	0/0:8,0:7:21.07:0,21,289	./.
chr10	36871381	.	G	GA	36.65	PASS	AB=0.903;AC=5;AF=0.100;AN=50;BaseQRankSum=4.532;DP=320;FS=3.039;HRun=0;HaplotypeScore=64.2049;InbreedingCoeff=0.1538;MQ=77.05;MQ0=2;MQRankSum=-3.348;QD=1.22;ReadPosRankSum=-0.036;VQSLOD=1.1612;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:22,1:23:17.56:18,0,577	0/0:1,0:1:3.01:0,3,42	0/0:12,0:11:28.84:0,29,272	0/0:18,0:16:27.71:0,28,276	./.	0/0:6,0:5:9.01:0,9,93	0/0:21,0:20:57.12:0,57,741	0/0:13,0:13:30.08:0,30,374	1/1:0,1:1:3.01:48,3,0	0/0:7,0:5:6.02:0,6,84	0/0:3,1:4:9.50:0,10,126	0/0:19,0:18:48.11:0,48,630	0/0:9,0:9:24.04:0,24,313	0/0:27,0:24:69.14:0,69,900	0/0:16,0:14:36.61:0,37,525	0/1:2,1:3:13.93:41,0,14	0/1:3,0:3:17.96:39,0,18	0/0:15,0:15:42.13:0,42,564	0/0:8,0:8:18.03:0,18,218	0/0:6,0:6:9.03:0,9,125	0/0:51,0:50:99:0,132,1862	0/0:9,0:9:18.06:0,18,251	0/0:8,0:8:24.06:0,24,296	0/0:25,0:25:66.22:0,66,923	0/0:5,0:5:14.99:0,15,156	./.	0/0:6,0:5:9:0,9,105	./.
chr10	36871419	.	G	GA	95.75	PASS	AB=0.885;AC=8;AF=0.167;AN=48;BaseQRankSum=5.490;DP=359;FS=0.000;HRun=0;HaplotypeScore=67.2508;InbreedingCoeff=0.0746;MQ=65.95;MQ0=6;MQRankSum=-4.393;QD=1.91;ReadPosRankSum=-0.707;VQSLOD=1.6210;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,2:20:7.66:0,8,621	1/1:2,0:2:2.99:23,3,0	0/1:14,0:8:9.62:10,0,174	0/0:24,0:16:32.88:0,33,401	0/1:1,1:2:0:0,0,0	0/1:10,0:8:6.68:7,0,173	0/0:21,0:20:45.12:0,45,603	0/0:16,0:16:45.12:0,45,577	0/1:3,0:2:23.84:24,0,36	0/0:5,0:1:3.01:0,3,39	0/0:5,0:5:9.01:0,9,95	0/0:22,0:21:57.10:0,57,703	0/0:15,1:15:32.80:0,33,350	0/0:27,0:24:39.12:0,39,708	0/1:9,2:10:20.18:20,0,265	0/1:6,2:6:22.66:128,0,23	./.	0/0:16,0:15:42.06:0,42,513	0/0:13,0:13:33.11:0,33,457	./.	0/0:62,0:60:99:0,131,1936	0/0:8,0:8:12.02:0,12,162	0/0:6,0:6:18.05:0,18,231	0/0:22,0:22:66.15:0,66,899	0/0:4,0:3:9.03:0,9,126	./.	0/0:11,1:9:3.98:0,4,251	./.
chr10	36871609	.	G	GA	87.31	PASS	AB=0.750;AC=3;AF=0.056;AN=54;BaseQRankSum=-0.926;DP=231;FS=1.848;HRun=0;HaplotypeScore=46.8146;InbreedingCoeff=-0.0894;MQ=73.88;MQ0=2;MQRankSum=-3.222;QD=5.82;ReadPosRankSum=-2.038;VQSLOD=2.9248;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:27.09:0,27,371	0/0:1,0:1:2.98:0,3,21	0/0:15,0:14:36.02:0,36,444	0/0:19,0:13:32.86:0,33,343	0/0:3,0:2:6.02:0,6,84	0/0:3,0:3:9.03:0,9,126	0/0:15,0:15:42.07:0,42,529	0/0:8,0:8:24.08:0,24,336	0/0:6,0:6:18.06:0,18,251	0/0:11,0:11:30.07:0,30,380	0/0:5,0:5:6.01:0,6,69	0/0:14,0:14:42.04:0,42,525	0/0:5,0:5:14.98:0,15,185	0/0:11,0:11:27.04:0,27,354	0/0:3,0:3:9.03:0,9,126	0/0:3,0:3:9.03:0,9,126	0/0:7,0:6:15.01:0,15,187	0/0:4,0:4:12.01:0,12,146	0/1:4,2:6:77.24:77,0,109	0/1:4,1:5:32.98:33,0,113	0/0:38,1:38:96.36:0,96,1293	0/0:4,0:4:9.03:0,9,126	0/0:7,0:7:21.05:0,21,255	0/0:12,0:12:33.10:0,33,444	0/0:8,0:8:21.07:0,21,287	0/1:2,2:4:49.87:76,0,50	0/0:2,0:2:6:0,6,66	./.
chr10	36871968	.	GC	G	3677.22	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=12.119;DP=644;FS=2.848;HRun=4;HaplotypeScore=68.8116;InbreedingCoeff=0.9926;MQ=89.55;MQ0=0;MQRankSum=-1.498;QD=33.13;ReadPosRankSum=2.647;VQSLOD=4.4689;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,141,1930	0/0:4,0:4:12.04:0,12,168	0/0:19,0:19:48.05:0,48,662	0/0:31,0:31:84.24:0,84,1118	1/1:1,8:9:24.03:272,24,0	0/0:20,0:20:60.19:0,60,819	0/0:39,0:39:99:0,111,1517	0/0:32,0:32:90.29:0,90,1243	1/1:0,20:20:60.18:720,60,0	0/0:22,0:22:66.19:0,66,876	0/0:12,0:12:36.11:0,36,475	0/0:21,0:21:63.21:0,63,882	0/0:19,0:19:54.17:0,54,734	0/0:28,0:28:84.28:0,84,1175	0/0:27,0:27:75.25:0,75,1050	1/1:2,25:27:69.21:828,69,0	1/1:1,21:22:63.19:756,63,0	0/0:26,0:26:72.21:0,72,988	0/0:19,0:19:57.13:0,57,729	0/0:9,0:9:27.08:0,27,362	0/0:53,0:53:99:0,160,2205	0/0:17,0:17:51.11:0,51,655	0/0:12,0:12:33.11:0,33,461	0/0:37,0:37:99:0,102,1352	0/0:12,0:12:36.11:0,36,487	1/1:0,24:24:69.19:815,69,0	0/0:24,0:23:69.16:0,69,892	1/1:0,9:9:24.05:288,24,0
chr10	36873850	.	A	ACCCTGC	16257.07	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-6.210;DP=607;FS=15.872;HRun=0;HaplotypeScore=131.3965;InbreedingCoeff=0.9877;MQ=80.25;MQ0=1;MQRankSum=-15.391;QD=44.66;ReadPosRankSum=-3.324;VQSLOD=3.3216;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:17,20:43:54.18:1739,54,0	1/1:4,5:9:12.04:402,12,0	0/0:19,0:19:18.06:0,18,374	0/0:22,0:22:38.78:0,39,630	0/0:19,0:19:30.10:0,30,648	1/1:8,9:21:24.08:759,24,0	1/1:19,14:35:45.15:1399,45,0	1/1:15,6:23:40.37:1120,40,0	0/0:22,0:22:57.18:0,57,1191	1/1:7,9:18:36.11:1016,36,0	1/1:8,6:19:21.03:623,21,0	0/0:21,0:21:54.19:0,54,1151	1/1:10,17:29:57.67:1912,58,0	1/1:7,8:15:27.09:894,27,0	1/1:4,11:17:26.79:902,27,0	0/0:11,0:11:33.10:0,33,656	0/0:41,0:41:93.28:0,93,1883	1/1:8,6:14:18.06:605,18,0	1/1:7,5:12:21.05:541,21,0	1/1:5,13:20:27.09:873,27,0	1/1:23,11:39:26.80:836,27,0	1/1:6,6:13:15.05:437,15,0	0/0:13,0:13:25.51:0,26,475	0/0:41,0:41:99:0,102,2130	1/1:6,7:16:23.66:754,24,0	0/0:24,0:24:63.22:0,63,1328	1/1:7,13:20:48.16:1444,48,0	0/0:10,0:10:21.07:0,21,454
chr10	36874772	.	AT	A	5032.45	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=12.671;DP=607;FS=5.107;HRun=1;HaplotypeScore=105.7244;InbreedingCoeff=0.9685;MQ=71.48;MQ0=0;MQRankSum=-2.475;QD=37.56;ReadPosRankSum=3.645;VQSLOD=4.9353;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,102,1625	0/0:12,0:12:36.12:0,36,573	0/0:27,0:26:78.20:0,78,1167	0/0:18,0:17:51.14:0,51,761	1/1:0,29:29:72.24:1007,72,0	0/0:19,0:19:57.18:0,57,880	0/0:23,0:23:60.19:0,60,936	0/0:30,0:30:87.25:0,87,1349	1/1:0,17:17:51.17:713,51,0	0/0:21,0:21:63.20:0,63,962	0/0:26,0:26:72.23:0,72,1124	0/0:23,0:23:66.21:0,66,1032	0/0:21,0:21:63.21:0,63,1006	0/0:16,0:16:48.16:0,48,765	0/0:23,0:23:69.24:0,69,1103	1/1:0,26:26:75.25:1049,75,0	1/1:0,23:23:63.21:881,63,0	0/0:16,0:16:48.16:0,48,766	0/0:7,0:7:21.03:0,21,302	0/0:26,0:26:75.26:0,75,1194	0/0:34,0:34:99:0,102,1630	0/0:16,0:16:45.15:0,45,719	0/0:18,0:18:51.16:0,51,791	0/0:23,0:23:69.24:0,69,1098	0/0:20,0:20:57.19:0,57,908	1/1:2,29:31:4.20:1089,4,0	0/0:18,0:18:51.13:0,51,787	1/1:0,8:8:21.07:294,21,0
chr10	36877696	.	G	GACAC	1339.74	PASS	AB=1.000;AC=28;AF=0.609;AN=46;BaseQRankSum=-2.780;DP=557;FS=12.291;HRun=0;HaplotypeScore=98.2501;InbreedingCoeff=0.4025;MQ=66.19;MQ0=9;MQRankSum=-1.244;QD=4.70;ReadPosRankSum=-2.386;VQSLOD=0.5976;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:21,8:31:3.01:70,3,0	0/1:7,0:8:16.51:45,0,17	./.	./.	0/0:7,0:11:9:0,9,81	0/0:9,0:13:9.01:0,9,84	0/0:19,0:24:11.67:0,12,165	1/1:26,0:26:11.12:85,11,0	0/0:10,0:19:15.02:0,15,139	1/1:9,0:9:9.03:147,9,0	1/1:7,0:6:2.99:23,3,0	0/1:23,0:23:23.42:23,0,83	1/1:8,0:17:2.74:12,3,0	0/1:16,0:16:12.92:153,0,13	1/1:12,8:22:9.03:211,9,0	0/0:12,0:18:12:0,12,108	0/0:28,0:36:3.85:0,4,199	1/1:14,0:15:10.78:93,11,0	1/1:14,0:13:8.84:98,9,0	1/1:13,0:13:2.19:7,2,0	1/1:31,0:31:13.01:334,13,0	./.	./.	0/0:40,0:46:15.28:0,15,421	1/1:21,0:17:8.76:124,9,0	0/1:17,0:18:6.46:6,0,22	1/1:8,3:13:3.01:70,3,0	./.
chr10	36877914	.	TC	T	15870.71	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=9.211;DP=687;FS=0.350;HRun=5;HaplotypeScore=71.5151;InbreedingCoeff=0.9962;MQ=95.70;MQ0=0;MQRankSum=-9.319;QD=29.55;ReadPosRankSum=4.012;VQSLOD=5.2552;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,53:55:99:1667,147,0	1/1:1,14:15:36.10:408,36,0	0/0:32,0:32:78.24:0,78,1029	0/0:36,0:36:99:0,99,1307	1/1:0,28:28:80.86:849,81,0	1/1:0,18:18:51.15:578,51,0	1/1:2,14:16:33.09:374,33,0	1/1:4,30:34:90.24:1013,90,0	1/1:0,21:21:57.16:645,57,0	1/1:0,17:16:48.14:543,48,0	1/1:3,21:24:64.08:743,64,0	0/0:27,0:27:72.22:0,72,967	1/1:1,20:21:57.16:646,57,0	1/1:1,19:20:51.15:578,51,0	1/1:0,29:29:69.20:783,69,0	1/1:0,18:18:54.15:613,54,0	1/1:3,40:43:96.27:1089,96,0	1/1:1,19:20:54.15:613,54,0	1/1:1,24:25:69.14:751,69,0	1/1:3,16:19:39.11:441,39,0	1/1:1,33:34:90.26:1021,90,0	1/1:0,18:18:48.14:545,48,0	0/0:20,0:20:57.16:0,57,741	0/0:35,0:35:99:0,105,1409	1/1:0,19:19:51.15:579,51,0	1/1:0,23:23:69.10:745,69,0	1/1:0,15:15:42.12:476,42,0	1/1:0,5:5:15.04:170,15,0
chr10	36878160	.	C	CCACACACATAT	6116.20	PASS	AB=0.967;AC=35;AF=0.625;AN=56;BaseQRankSum=4.639;DP=530;FS=8.833;HRun=0;HaplotypeScore=211.9081;InbreedingCoeff=0.4504;MQ=50.83;MQ0=8;MQRankSum=0.344;QD=15.37;ReadPosRankSum=-0.329;VQSLOD=2.8069;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:21:1.53:141,0,2	1/1:0,1:12:3.01:139,3,0	0/0:20,0:7:18.06:0,18,454	0/0:21,0:6:7.09:0,7,96	1/1:20,0:20:6.96:149,7,0	1/1:18,0:20:20.98:425,21,0	0/1:18,0:19:26.46:453,0,26	1/1:28,0:28:25.98:656,26,0	0/0:14,0:12:2.60:0,3,27	1/1:15,0:14:12.42:198,12,0	1/1:20,0:22:25.76:270,26,0	0/0:18,0:18:54.17:0,54,1513	1/1:22,0:20:11.06:388,11,0	1/1:0,0:12:6.02:259,6,0	0/1:21,0:21:12.61:310,0,13	1/1:10,0:10:13.82:210,14,0	0/0:19,0:18:6.43:0,6,175	0/1:32,0:33:8.37:430,0,8	1/1:18,0:18:39.64:496,40,0	1/1:31,0:31:40.86:373,41,0	1/1:1,0:19:3.01:121,3,0	1/1:1,0:10:3.01:139,3,0	0/0:16,0:16:35.60:0,36,1041	0/0:22,0:23:59.43:0,59,1565	1/1:5,0:18:9.02:397,9,0	0/1:27,0:27:99:285,0,105	1/1:0,0:15:9:278,9,0	0/0:1,0:1:2.99:0,3,23
chr10	36878175	.	AT	A	3017.21	PASS	AC=14;AF=0.259;AN=54;BaseQRankSum=1.814;DP=453;FS=3.127;HRun=7;HaplotypeScore=113.6634;InbreedingCoeff=0.9503;MQ=63.32;MQ0=1;MQRankSum=-5.161;QD=23.95;ReadPosRankSum=1.334;VQSLOD=2.9895;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,13:16:30.06:306,30,0	0/0:10,0:10:18.81:0,19,198	0/0:18,0:12:8.27:0,8,285	0/0:17,0:9:18.52:0,19,227	0/0:21,0:21:51.15:0,51,628	1/1:3,13:16:36.08:367,36,0	1/1:3,14:17:39.09:398,39,0	0/0:29,0:29:75.24:0,75,942	0/0:9,0:8:21.40:0,21,242	1/1:1,14:15:42.09:428,42,0	1/1:3,16:19:48.10:490,48,0	0/0:18,0:18:48.14:0,48,590	0/0:12,0:11:33.11:0,33,412	0/0:10,0:10:9.03:0,9,113	1/1:1,17:18:48.11:489,48,0	0/0:12,0:12:33.10:0,33,408	0/0:20,0:20:51.12:0,51,623	1/1:0,25:25:72.16:734,72,0	0/0:16,0:16:42.08:0,42,510	0/0:22,0:22:66.14:0,66,810	0/0:13,0:13:6.02:0,6,75	0/0:9,0:9:15.05:0,15,189	0/0:13,0:13:36.12:0,36,452	0/0:21,0:21:54.17:0,54,678	0/0:22,0:22:32.97:0,33,395	0/0:17,1:18:17.52:0,18,517	0/0:17,0:17:26.88:0,27,325	./.
chr10	36879752	.	A	AT	11550.82	PASS	AB=1.000;AC=48;AF=0.857;AN=56;BaseQRankSum=1.329;DP=581;FS=5.613;HRun=9;HaplotypeScore=93.0991;InbreedingCoeff=0.7662;MQ=70.14;MQ0=2;MQRankSum=-3.962;QD=22.04;ReadPosRankSum=1.650;VQSLOD=5.4168;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:10,27:37:89.98:938,90,0	1/1:1,7:8:24.06:265,24,0	0/1:30,0:16:1.45:1,0,125	0/1:23,0:14:4.59:5,0,121	1/1:6,17:24:57.14:618,57,0	1/1:5,9:14:33.09:363,33,0	1/1:8,12:20:45.08:484,45,0	1/1:11,17:27:60.16:660,60,0	1/1:3,19:22:51.14:564,51,0	1/1:6,23:29:72.62:782,73,0	1/1:2,9:11:0.92:224,1,0	0/0:20,0:20:53.95:0,54,459	1/1:7,5:12:30.05:308,30,0	1/1:4,10:14:36.10:398,36,0	1/1:6,11:17:45.04:472,45,0	1/1:3,13:16:30.08:331,30,0	1/1:5,21:26:63.17:692,63,0	1/1:10,16:26:60.13:649,60,0	1/1:10,16:26:57.15:630,57,0	1/1:7,11:18:33.08:357,33,0	1/1:0,8:9:23.90:246,24,0	1/1:4,14:18:39.06:415,39,0	0/0:16,0:16:35.76:0,36,309	0/0:21,0:21:56.97:0,57,493	1/1:16,15:31:51.06:530,51,0	1/1:8,26:34:58.17:868,58,0	1/1:8,11:19:45.09:485,45,0	1/1:3,8:11:24.06:266,24,0
chr10	36880435	.	T	TTTG	6566.18	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=2.684;DP=626;FS=4.969;HRun=0;HaplotypeScore=108.6274;InbreedingCoeff=0.9970;MQ=65.55;MQ0=2;MQRankSum=-1.355;QD=44.67;ReadPosRankSum=4.122;VQSLOD=6.8614;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:78.24:0,78,1111	0/0:12,0:12:27.09:0,27,388	0/0:25,0:16:31.60:0,32,388	0/0:28,0:20:39.76:0,40,473	1/1:5,18:24:54.18:1099,54,0	0/0:20,0:20:45.11:0,45,638	0/0:18,0:18:45.14:0,45,644	0/0:31,0:31:57.55:0,58,753	1/1:2,6:9:18.06:370,18,0	0/0:29,0:29:77.96:0,78,980	0/0:20,0:20:50.64:0,51,679	0/0:20,0:20:57.08:0,57,755	0/0:14,0:14:21.06:0,21,290	0/0:17,0:17:36.11:0,36,511	0/0:16,0:16:39.10:0,39,522	1/1:3,14:18:33.11:679,33,0	1/1:8,30:36:69.24:1418,69,0	0/0:19,0:19:51.04:0,51,700	0/0:25,0:24:45.13:0,45,608	0/0:27,0:27:66.14:0,66,908	0/0:15,0:15:30.10:0,30,442	0/0:22,0:22:47.64:0,48,637	0/0:25,0:25:69.21:0,69,977	0/0:18,0:17:42.12:0,42,575	0/0:20,0:20:42.14:0,42,619	1/1:2,28:31:87.19:1685,87,0	0/0:25,0:25:57.17:0,57,798	1/1:4,22:27:66.18:1315,66,0
chr10	36880508	.	TGTTGTTG	T	8045.91	PASS	AB=0.832;AC=31;AF=0.554;AN=56;BaseQRankSum=12.074;DP=574;FS=10.824;HRun=0;HaplotypeScore=166.5184;InbreedingCoeff=0.7458;MQ=55.78;MQ0=4;MQRankSum=-2.550;QD=25.14;ReadPosRankSum=-2.810;VQSLOD=3.2261;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:22,1:26:20.30:351,20,0	1/1:0,11:11:21.49:521,21,0	0/0:18,0:11:18.62:0,19,301	0/0:21,0:8:23.13:0,23,212	0/0:23,0:23:58.93:0,59,1429	1/1:5,0:13:2.20:228,2,0	1/1:10,1:14:14.64:240,15,0	1/1:1,29:29:85.50:1220,85,0	0/0:21,0:21:60.21:0,60,2187	1/1:28,0:32:10.30:412,10,0	0/1:14,0:18:16.68:197,0,17	0/0:19,0:19:57.16:0,57,1439	1/1:0,0:20:6.69:35,7,0	1/1:0,9:9:15.05:418,15,0	0/1:15,0:16:3.28:167,0,3	0/0:18,0:18:45.08:0,45,1299	0/0:37,0:36:99:0,105,3361	0/1:9,0:14:5.90:197,0,6	1/1:0,14:14:42.12:688,42,0	1/1:0,32:32:90.20:1532,90,0	1/1:0,10:10:2.97:20,3,0	1/1:1,1:17:26.33:396,26,0	0/0:25,0:25:69.20:0,69,1505	0/0:29,0:28:81.27:0,81,2576	1/1:0,19:19:27.09:744,27,0	0/0:28,0:28:81.27:0,81,2120	1/1:2,18:21:27.09:679,27,0	0/0:14,0:14:33.11:0,33,1094
chr10	36880511	.	TG	T	1491.95	PASS	AB=0.897;AC=26;AF=0.464;AN=56;BaseQRankSum=14.407;DP=562;FS=0.379;HRun=1;HaplotypeScore=128.7337;InbreedingCoeff=0.4612;MQ=53.91;MQ0=5;MQRankSum=-6.205;QD=4.71;ReadPosRankSum=-1.308;VQSLOD=-0.2248;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:25,1:27:3.32:149,0,3	1/1:11,0:11:13.32:44,13,0	0/0:13,0:8:15.06:0,15,245	0/0:20,1:8:20.99:0,21,244	0/0:23,0:23:57.22:0,57,694	0/1:9,2:12:4.95:122,0,5	1/1:10,2:13:0.39:90,0,0	0/1:30,0:29:41.22:41,0,43	0/0:21,0:21:60.20:0,60,948	1/1:31,4:33:0.02:275,0,0	0/1:14,2:17:30.87:82,0,31	0/0:18,0:18:54.15:0,54,799	1/1:20,0:20:38.85:188,39,0	1/1:9,0:9:11.10:36,11,0	0/1:14,1:15:6.64:83,0,7	0/0:18,0:18:45.08:0,45,662	0/0:37,0:36:99:0,105,1622	0/1:7,6:13:14.12:68,0,14	0/1:14,0:14:6.78:13,0,7	1/1:32,0:32:46.95:194,47,0	0/1:10,0:10:0:0,0,0	1/1:18,0:17:31.68:148,32,0	0/0:22,0:22:64.77:0,65,936	0/0:28,0:27:81.28:0,81,1261	1/1:19,0:19:20.66:74,21,0	0/0:28,0:28:84.25:0,84,1238	1/1:21,0:20:20.59:76,21,0	0/0:14,0:14:33.11:0,33,510
chr10	36880514	.	TGTTG	T	1662.52	PASS	AB=0.873;AC=18;AF=0.321;AN=56;BaseQRankSum=11.866;DP=555;FS=13.078;HRun=0;HaplotypeScore=155.9666;InbreedingCoeff=0.4656;MQ=53.98;MQ0=4;MQRankSum=-6.421;QD=8.70;ReadPosRankSum=-3.451;VQSLOD=1.5651;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:27,1:27:1.52:342,2,0	1/1:11,0:11:1.73:4,2,0	0/0:14,0:9:3.94:0,4,243	0/0:22,0:9:19.86:0,20,248	0/0:23,0:23:57.81:0,58,1078	0/1:11,1:12:4.79:242,0,5	1/1:13,2:15:9.66:219,10,0	0/0:30,0:29:72.83:0,73,610	0/0:21,0:21:60.21:0,60,1630	1/1:27,3:28:0.05:352,0,0	0/1:16,2:18:20.31:182,0,20	0/0:18,0:18:54.17:0,54,1172	0/0:20,0:20:43.71:0,44,334	1/1:9,0:9:4.01:8,4,0	0/1:13,1:14:6.45:153,0,6	0/0:18,0:18:45.09:0,45,1042	0/0:35,0:34:96.30:0,96,2527	0/1:9,4:14:15.90:157,0,16	0/0:14,0:14:19.89:0,20,197	0/0:32,0:32:65.03:0,65,509	0/0:10,0:10:2.94:0,3,18	0/0:17,0:16:29.66:0,30,235	0/0:21,0:21:62.56:0,63,1143	0/0:27,0:26:78.27:0,78,1991	1/1:19,0:19:1.09:3,1,0	0/0:28,0:28:84.29:0,84,1859	1/1:21,0:20:14.65:158,15,0	0/0:14,0:14:33.09:0,33,802
chr10	36883496	.	GTCTCTCTC	G	1921.83	PASS	AB=0.938;AC=26;AF=0.500;AN=52;BaseQRankSum=4.755;DP=555;FS=6.897;HRun=0;HaplotypeScore=133.4103;InbreedingCoeff=0.5849;MQ=68.43;MQ0=11;MQRankSum=-5.042;QD=7.34;ReadPosRankSum=2.201;VQSLOD=1.6753;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:31,0:31:17.02:17,0,31	0/0:9,0:8:0.89:0,1,2	./.	./.	1/1:12,0:16:2.90:16,3,0	1/1:8,3:10:6.02:150,6,0	1/1:12,4:16:6.02:150,6,0	0/0:20,0:19:13.94:0,14,358	1/1:16,1:24:13.53:246,14,0	1/1:9,0:10:5.98:77,6,0	1/1:12,0:12:3.47:25,3,0	0/0:18,0:23:24.08:0,24,544	0/0:14,0:15:20.28:0,20,642	0/0:5,0:7:6.02:0,6,209	1/1:8,10:19:24.08:579,24,0	1/1:11,0:18:18.06:335,18,0	1/1:26,0:27:6.02:118,6,0	1/1:18,6:24:9.03:224,9,0	0/0:20,0:20:24.97:0,25,858	0/0:15,0:15:6.02:0,6,235	0/0:45,0:45:48.16:0,48,1723	0/0:14,0:14:5.76:0,6,145	0/0:11,0:11:9.03:0,9,201	0/1:24,1:28:53.80:54,0,248	0/0:13,0:14:15.03:0,15,396	1/1:12,0:14:3.48:56,3,0	0/0:15,0:15:18.06:0,18,674	1/1:10,0:11:3.01:56,3,0
chr10	36888706	.	TGCCCAAGAGGGG	T	14180.88	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=15.920;DP=536;FS=24.059;HRun=0;HaplotypeScore=191.0562;InbreedingCoeff=0.9983;MQ=79.35;MQ0=0;MQRankSum=-15.367;QD=81.97;ReadPosRankSum=1.615;VQSLOD=3.2978;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,117,6100	1/1:0,7:7:21.07:810,21,0	0/0:16,0:16:48.16:0,48,2719	0/0:21,0:22:60.57:0,61,2993	0/0:17,0:17:48.15:0,48,2696	0/0:17,0:17:51.18:0,51,3070	0/0:26,0:26:78.25:0,78,4635	1/1:6,15:21:45.14:1517,45,0	0/0:21,0:21:63.21:0,63,3785	0/0:30,0:30:87.30:0,87,5049	0/0:10,0:10:26.83:0,27,1331	0/0:21,0:21:63.22:0,63,3843	1/1:0,17:17:48.16:1851,48,0	1/1:0,14:14:33.11:1273,33,0	0/0:28,0:28:84.29:0,84,4937	0/0:15,0:15:45.14:0,45,2382	0/0:32,0:32:96.33:0,96,5892	0/0:16,0:16:48.16:0,48,3007	1/1:4,8:12:24.08:864,24,0	1/1:1,17:18:45.15:1578,45,0	1/1:3,24:27:45.15:1548,45,0	1/1:3,14:16:27.09:960,27,0	0/0:10,0:10:30.09:0,30,1679	0/0:15,0:15:45.15:0,45,2595	1/1:1,16:17:45.15:1696,45,0	0/0:20,0:20:60.20:0,60,3388	1/1:1,22:23:54.19:2083,54,0	0/0:8,0:8:24.08:0,24,1227
chr10	36889025	.	TTGATTGATTGATTGATTGTGTGTGTGTG	T	1376.34	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=5.318;DP=576;FS=0.000;HRun=0;HaplotypeScore=322.8616;InbreedingCoeff=0.6281;MQ=55.70;MQ0=20;MQRankSum=-5.658;QD=29.28;ReadPosRankSum=-0.199;VQSLOD=1.5508;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:57.63:0,58,1704	0/0:6,0:6:18.06:0,18,700	0/0:17,0:11:30.09:0,30,1622	0/0:28,0:26:69.22:0,69,2713	0/0:19,0:18:36.12:0,36,839	0/0:19,0:18:14.26:0,14,344	0/0:19,0:19:5.06:0,5,1261	0/0:25,0:23:66.23:0,66,3143	0/0:28,0:25:12.50:0,12,205	0/0:31,0:30:21.41:0,21,2644	0/0:15,0:15:29.91:0,30,1074	0/0:14,0:14:42.14:0,42,2703	0/0:20,0:20:59.42:0,59,4088	0/0:15,0:14:37.37:0,37,2507	0/0:30,0:29:24.55:0,25,683	0/1:23,0:22:29.05:29,0,185	0/0:26,0:24:18.06:0,18,468	0/0:17,0:17:45.11:0,45,1712	0/0:15,0:15:36.12:0,36,1795	0/0:17,0:17:47.37:0,47,3249	0/0:38,0:35:94.82:0,95,5600	0/0:23,0:23:60.21:0,60,3848	0/0:13,0:13:36.12:0,36,2473	0/0:32,0:32:82.52:0,83,6141	0/0:19,0:18:43.86:0,44,2492	1/1:15,0:15:30.09:1240,30,0	0/0:17,0:16:45.15:0,45,2958	1/1:0,9:9:3.01:225,3,0
chr10	36889027	.	GATTGATTGATTGAT	G	1054.60	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=5.519;DP=569;FS=1.025;HRun=0;HaplotypeScore=195.4640;InbreedingCoeff=0.3577;MQ=53.95;MQ0=22;MQRankSum=-5.785;QD=10.76;ReadPosRankSum=3.053;VQSLOD=2.7492;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:61.35:0,61,1651	0/0:6,0:6:18.06:0,18,692	0/0:15,0:10:30.09:0,30,1622	0/0:26,0:24:69.22:0,69,2713	0/0:16,0:15:36.12:0,36,839	0/0:19,0:18:14.26:0,14,243	0/0:21,0:21:54.45:0,54,1284	0/0:25,0:23:66.23:0,66,3143	0/1:26,0:23:31.45:31,0,112	0/0:32,0:31:83.85:0,84,2614	0/0:17,0:17:40.48:0,40,1109	0/0:15,0:15:44.36:0,44,2155	0/0:20,0:20:59.42:0,59,3065	0/0:16,0:15:37.37:0,37,2011	0/1:28,0:27:19.57:20,0,455	0/1:23,0:21:2.08:2,0,213	0/0:26,0:24:18.06:0,18,468	0/0:17,0:17:45.11:0,45,1416	0/0:15,0:15:36.12:0,36,1567	0/0:17,0:16:47.37:0,47,2842	0/0:40,0:37:99:0,99,5174	0/0:22,0:22:60.21:0,60,3342	0/0:13,0:13:38.34:0,38,2075	0/0:33,0:33:85.53:0,86,4878	0/0:19,0:18:44.36:0,44,2289	1/1:4,8:12:1.72:1007,2,0	0/0:16,0:15:45.15:0,45,2497	1/1:9,0:9:3.01:108,3,0
chr10	36889036	.	ATTGATTGTGTGTGTGT	A	2192.73	PASS	AB=0.952;AC=15;AF=0.268;AN=56;BaseQRankSum=10.853;DP=551;FS=3.146;HRun=0;HaplotypeScore=193.2940;InbreedingCoeff=0.2009;MQ=51.35;MQ0=29;MQRankSum=-1.003;QD=8.70;ReadPosRankSum=3.027;VQSLOD=2.7799;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:20,0:20:56.33:174,0,56	0/0:4,0:4:10.85:0,11,213	0/0:12,0:9:27.08:0,27,548	0/0:18,0:17:16.87:0,17,653	0/1:4,0:15:1.55:66,0,2	0/0:17,0:16:7.96:0,8,39	0/1:17,0:17:51.04:108,0,51	0/0:25,0:23:66.59:0,67,1158	1/1:7,26:27:8.80:322,9,0	0/1:30,0:29:99:392,0,204	0/1:17,0:17:12.93:13,0,127	0/0:12,0:12:34:0,34,1160	0/0:16,0:16:45.92:0,46,1852	0/0:17,0:16:42.35:0,42,1353	0/1:27,0:26:37.27:246,0,37	1/1:4,0:22:9.71:306,10,0	1/1:9,0:24:7.70:43,8,0	0/1:16,0:16:18.73:155,0,19	0/0:16,0:16:47.52:0,48,773	0/0:17,0:16:43.92:0,44,1357	0/0:43,0:39:86.14:0,86,2006	0/0:21,0:21:52.90:0,53,1420	0/0:13,0:13:35.24:0,35,1166	0/0:32,0:32:82.60:0,83,3043	0/0:19,0:17:35.35:0,35,887	0/1:13,0:13:10.58:430,0,11	0/0:17,0:16:45.55:0,46,1225	0/1:11,0:11:9.32:105,0,9
chr10	36889037	.	TTGATTGTGTGTGTG	T	3771.36	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=7.157;DP=551;FS=5.968;HRun=0;HaplotypeScore=174.2160;InbreedingCoeff=0.7662;MQ=51.15;MQ0=30;MQRankSum=-1.931;QD=15.52;ReadPosRankSum=0.538;VQSLOD=2.0254;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:21:27.91:508,28,0	0/0:4,0:4:9.92:0,10,139	0/0:11,0:8:20.81:0,21,308	0/0:17,0:17:1.46:0,1,381	1/1:16,0:15:1.41:84,1,0	1/1:17,0:16:1.79:33,2,0	1/1:17,0:17:16.20:364,16,0	0/0:26,0:24:42.61:0,43,728	1/1:33,0:27:8.94:256,9,0	1/1:13,17:29:2.44:791,2,0	1/1:4,12:16:1.21:83,1,0	0/0:12,0:12:33.57:0,34,899	0/0:16,0:16:39.60:0,40,1444	0/0:17,0:16:39.60:0,40,1084	1/1:4,22:26:8.56:361,9,0	1/1:24,0:22:9.66:218,10,0	0/0:29,0:25:0.89:0,1,2	1/1:16,0:16:36.12:544,36,0	0/0:16,0:16:18.02:0,18,399	0/0:17,0:16:43.09:0,43,931	0/0:43,0:39:77.61:0,78,1326	0/0:21,0:21:46.09:0,46,942	0/0:13,0:13:34.05:0,34,879	0/0:31,0:31:76.20:0,76,2353	0/0:19,0:17:31.04:0,31,590	1/1:14,0:14:33.06:431,33,0	0/0:16,0:15:33.58:0,34,809	1/1:11,0:11:3.01:98,3,0
chr10	36889039	.	GAT	G	1813.03	PASS	AB=0.941;AC=15;AF=0.268;AN=56;BaseQRankSum=2.762;DP=550;FS=6.387;HRun=0;HaplotypeScore=97.1728;InbreedingCoeff=0.3531;MQ=50.71;MQ0=31;MQRankSum=0.191;QD=8.06;ReadPosRankSum=2.421;VQSLOD=2.5686;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:22,2:23:14.58:410,15,0	0/0:4,0:4:10.28:0,10,141	0/0:9,0:7:20.81:0,21,308	0/0:14,1:15:1.47:0,1,381	0/0:16,0:15:4.81:0,5,16	0/1:5,12:16:0.52:30,0,1	0/1:19,0:19:12.60:173,0,13	0/0:26,0:24:31.82:0,32,567	0/1:33,0:27:1.46:38,0,1	0/1:28,0:27:25.77:588,0,26	0/0:17,0:16:5.55:0,6,15	0/0:13,0:13:34.33:0,34,480	0/0:15,0:15:40.38:0,40,642	0/0:17,0:16:33.58:0,34,499	1/1:26,0:25:8.78:78,9,0	0/1:24,0:22:3.28:3,0,40	0/0:28,1:25:1.16:0,1,3	1/1:12,3:15:21.94:442,22,0	0/0:16,0:16:18:0,18,248	0/0:17,0:16:44.63:0,45,692	0/0:43,0:39:81.48:0,81,1162	0/0:20,0:20:3.77:0,4,638	0/1:14,0:14:7.04:7,0,432	0/0:34,0:34:42.10:0,42,1162	0/0:18,0:16:32.59:0,33,467	0/1:14,0:14:27.03:191,0,27	0/0:16,0:15:34.36:0,34,539	1/1:11,0:11:2.84:14,3,0
chr10	36889041	.	TTGTGTGTGTG	T	1448.20	PASS	AB=0.941;AC=21;AF=0.438;AN=48;BaseQRankSum=6.807;DP=577;FS=5.094;HRun=0;HaplotypeScore=156.1286;InbreedingCoeff=0.6328;MQ=49.92;MQ0=33;MQRankSum=-4.033;QD=6.24;ReadPosRankSum=-0.548;VQSLOD=2.4887;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:24,1:24:3.01:86,3,0	./.	./.	./.	1/1:15,2:16:3.01:87,3,0	./.	1/1:12,5:17:6.01:173,6,0	0/0:28,0:26:19.24:0,19,291	1/1:34,0:27:8.60:196,9,0	1/1:27,0:27:9.02:198,9,0	1/1:17,0:16:2.69:86,3,0	0/0:16,0:16:15.05:0,15,503	0/0:18,0:18:24.08:0,24,981	0/0:21,0:20:21.54:0,22,717	1/1:26,0:25:9.03:227,9,0	1/1:23,0:22:9.50:207,10,0	0/0:29,0:25:0:0,0,0	0/1:15,1:16:2.33:83,0,2	0/0:17,0:17:10.59:0,11,191	0/0:17,0:16:15.02:0,15,198	0/0:44,0:40:6.02:0,6,87	0/0:22,0:21:6.02:0,6,203	0/0:16,0:16:15.04:0,15,493	0/0:39,0:39:38.33:0,38,1646	0/0:18,0:16:3:0,3,90	1/1:14,0:16:4.67:200,5,0	0/0:17,0:16:6.02:0,6,156	1/1:11,0:11:3.01:70,3,0
chr10	36891024	.	T	TA	3073.26	PASS	AB=0.775;AC=41;AF=0.732;AN=56;BaseQRankSum=2.537;DP=510;FS=0.495;HRun=14;HaplotypeScore=69.5184;InbreedingCoeff=0.5028;MQ=79.09;MQ0=5;MQRankSum=-0.231;QD=6.91;ReadPosRankSum=-0.550;VQSLOD=2.4105;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,1:23:22.89:126,23,0	1/1:1,7:8:15.01:133,15,0	0/1:38,0:19:7.95:8,0,24	0/1:22,0:12:0.15:0,0,24	1/1:2,2:16:27.30:144,27,0	1/1:4,1:18:25.66:130,26,0	1/1:4,1:17:17.20:92,17,0	1/1:4,14:19:40.14:301,40,0	1/1:1,0:14:22.80:116,23,0	1/1:5,0:16:21.32:132,21,0	0/1:4,1:14:1.04:105,0,1	0/0:19,1:23:28.65:0,29,274	1/1:5,12:19:9.92:178,10,0	0/1:5,12:19:1.37:102,0,1	1/1:5,0:14:18.43:95,18,0	1/1:0,0:14:19.76:97,20,0	1/1:3,0:25:37.06:195,37,0	1/1:6,1:22:37.19:201,37,0	0/1:7,9:16:6.76:139,0,7	1/1:8,1:15:26.55:163,27,0	1/1:1,9:10:15.01:133,15,0	1/1:8,11:21:8.45:163,8,0	0/1:15,0:15:7.31:7,0,171	0/0:15,0:15:32.13:0,32,199	1/1:4,17:22:25.58:318,26,0	0/0:14,0:16:13.52:0,14,196	0/1:11,14:26:8.20:170,0,8	0/0:11,0:10:23.59:0,24,152
chr10	36893918	.	T	TGACCC	965.07	PASS	AB=0.800;AC=25;AF=0.962;AN=26;BaseQRankSum=-0.578;DP=30;FS=0.000;HRun=0;HaplotypeScore=9.5701;InbreedingCoeff=-0.2229;MQ=128.26;MQ0=0;MQRankSum=-0.771;QD=41.96;ReadPosRankSum=0.964;VQSLOD=2.8772;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	1/1:1,1:3:9.03:247,9,0	0/1:3,1:4:23.61:184,0,24	1/1:2,0:2:3:25,3,0	./.	./.	1/1:1,0:1:3.01:56,3,0	1/1:2,0:2:2.99:24,3,0	./.	1/1:0,0:1:3.01:75,3,0	./.	./.	1/1:0,0:1:3.01:76,3,0	./.	./.	1/1:2,0:2:3.01:38,3,0	./.	1/1:1,0:1:3.01:83,3,0	1/1:1,0:1:3.01:50,3,0	./.	./.	1/1:1,0:2:3.01:91,3,0	./.	1/1:2,0:2:3.01:48,3,0	1/1:1,0:1:3.01:49,3,0	./.	./.
chr10	36894825	.	G	GA	240.68	PASS	AB=0.979;AC=12;AF=0.214;AN=56;BaseQRankSum=7.021;DP=541;FS=35.954;HRun=0;HaplotypeScore=170.2231;InbreedingCoeff=0.0111;MQ=40.11;MQ0=5;MQRankSum=-4.219;QD=1.06;ReadPosRankSum=1.764;VQSLOD=1.4913;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:15,0:15:0:0,0,0	0/0:7,0:7:0.59:0,1,3	0/0:15,0:4:8.39:0,8,91	0/0:15,0:5:13.98:0,14,129	0/0:20,0:20:2.97:0,3,42	0/0:14,0:14:5.02:0,5,40	1/1:18,0:19:0.76:11,1,0	0/0:45,0:45:63.70:0,64,1262	0/1:27,0:27:14.84:15,0,70	0/1:28,3:31:99:148,0,368	0/0:12,0:12:7.11:0,7,86	0/1:25,0:25:13.94:14,0,24	0/1:17,0:17:1.39:1,0,79	0/0:14,0:14:8.91:0,9,126	0/1:27,0:27:17.46:17,0,30	1/1:16,0:16:1.92:22,2,0	0/0:15,0:15:15.05:0,15,202	0/0:8,0:8:12.04:0,12,166	0/0:15,0:14:38.15:0,38,457	0/0:19,0:19:6.50:0,7,90	0/0:32,0:32:28.87:0,29,401	0/0:20,0:20:7.82:0,8,81	0/0:17,0:17:8.04:0,8,108	0/0:22,0:22:6.29:0,6,122	0/1:25,0:25:9.26:9,0,42	0/1:22,2:22:99:130,0,361	0/0:15,0:15:1.79:0,2,58	0/0:10,0:10:12.75:0,13,180
chr10	36895048	.	A	ACACC	6977.29	PASS	AB=0.984;AC=52;AF=0.963;AN=54;BaseQRankSum=4.755;DP=183;FS=10.776;HRun=0;HaplotypeScore=149.7002;InbreedingCoeff=-0.0776;MQ=89.75;MQ0=2;MQRankSum=-5.621;QD=38.13;ReadPosRankSum=4.668;VQSLOD=4.5297;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,8:10:30.09:530,30,0	1/1:0,1:1:3.01:57,3,0	0/1:29,0:20:48.64:49,0,287	0/1:23,0:15:12.93:13,0,103	1/1:1,1:2:6.02:136,6,0	1/1:0,4:4:12.04:221,12,0	1/1:1,3:4:12.02:192,12,0	1/1:1,0:1:3:27,3,0	1/1:0,5:5:15.05:278,15,0	1/1:0,2:2:6.02:129,6,0	1/1:0,3:4:12.04:217,12,0	1/1:0,13:13:39.13:695,39,0	1/1:2,8:10:29.97:535,30,0	1/1:1,14:15:45.14:808,45,0	1/1:0,7:7:21.07:407,21,0	1/1:1,6:7:21.06:362,21,0	1/1:0,3:3:6.02:122,6,0	1/1:2,6:8:21.07:463,21,0	1/1:1,2:3:9.03:184,9,0	1/1:1,0:1:3.01:72,3,0	1/1:1,1:2:5.95:66,6,0	1/1:3,0:3:3.01:66,3,0	./.	1/1:0,5:5:15.05:300,15,0	1/1:2,2:4:9.03:197,9,0	1/1:0,6:6:15.05:309,15,0	1/1:2,6:8:24.08:434,24,0	1/1:1,1:2:6.02:108,6,0
chr10	36895058	.	TTCCCC	T	3048.82	PASS	AC=42;AF=0.875;AN=48;BaseQRankSum=5.705;DP=155;FS=2.931;HRun=0;HaplotypeScore=173.5479;InbreedingCoeff=0.5390;MQ=78.21;MQ0=2;MQRankSum=-1.246;QD=28.23;ReadPosRankSum=5.417;VQSLOD=3.6119;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,8:8:24.05:244,24,0	1/1:0,1:1:3.01:31,3,0	0/0:30,0:17:19.78:0,20,408	0/0:15,0:6:2.64:0,3,25	1/1:0,1:1:3:25,3,0	1/1:0,4:4:12.02:114,12,0	1/1:0,3:3:9.01:88,9,0	./.	1/1:0,5:5:15.02:145,15,0	1/1:0,2:2:6.02:76,6,0	1/1:0,4:4:11.99:103,12,0	1/1:0,13:13:38.70:356,39,0	1/1:0,9:9:26.71:246,27,0	1/1:0,14:14:42.06:409,42,0	1/1:0,7:7:21.05:218,21,0	1/1:0,6:6:18.03:177,18,0	1/1:0,3:3:8.98:85,9,0	1/1:0,6:6:18.06:253,18,0	1/1:0,2:2:6.02:81,6,0	./.	0/0:0,1:1:2.68:0,3,11	./.	./.	1/1:0,5:5:8.49:76,8,0	1/1:0,2:2:6.01:58,6,0	1/1:0,6:6:15.04:176,15,0	1/1:1,5:6:18:176,18,0	1/1:0,1:1:3.01:34,3,0
chr10	36898908	.	A	AC	2537.38	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-3.322;DP=601;FS=9.919;HRun=0;HaplotypeScore=81.2877;InbreedingCoeff=0.9373;MQ=61.55;MQ0=4;MQRankSum=0.610;QD=27.58;ReadPosRankSum=8.384;VQSLOD=3.0456;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:34:43.04:0,43,478	0/0:5,0:5:14.96:0,15,150	0/0:11,0:9:2.01:0,2,140	0/0:12,0:9:22.79:0,23,149	1/1:1,21:22:62.96:714,63,0	0/0:24,0:24:52.22:0,52,400	0/0:16,0:16:31.48:0,31,246	0/0:31,0:31:78.24:0,78,783	1/1:5,15:20:46.56:545,47,0	0/0:29,0:29:57.83:0,58,465	0/0:27,0:27:41.21:0,41,366	0/0:16,0:16:35.21:0,35,275	0/0:22,0:22:61.86:0,62,598	0/0:20,0:20:50.74:0,51,471	0/0:15,0:14:35.25:0,35,282	1/1:1,19:20:54.08:638,54,0	1/1:4,26:29:51.63:800,52,0	0/0:27,0:27:48.85:0,49,419	0/0:24,0:24:71.97:0,72,730	0/0:22,0:22:65.73:0,66,555	0/0:9,0:9:21:0,21,237	0/0:24,0:24:66.47:0,66,620	0/0:19,0:19:49.48:0,49,484	0/0:28,0:28:54.80:0,55,587	0/0:24,0:24:68.35:0,68,717	0/0:33,0:32:88.42:0,88,685	0/0:27,0:25:70.15:0,70,673	0/0:9,0:8:17.46:0,17,144
chr10	36898983	.	AATAG	A	3218.59	PASS	AB=0.610;AC=7;AF=0.125;AN=56;BaseQRankSum=10.642;DP=633;FS=2.884;HRun=0;HaplotypeScore=105.1868;InbreedingCoeff=0.7871;MQ=71.54;MQ0=1;MQRankSum=-2.415;QD=39.25;ReadPosRankSum=0.885;VQSLOD=3.9729;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:84.29:0,84,2111	0/0:9,0:9:27.09:0,27,702	0/0:23,0:23:60.15:0,60,1361	0/0:18,0:17:27.12:0,27,756	1/1:3,17:20:51.17:910,51,0	0/0:25,0:25:75.26:0,75,1964	0/0:18,0:18:54.19:0,54,1322	0/0:34,0:34:90.28:0,90,2129	1/1:7,13:20:48.16:857,48,0	0/0:38,0:38:99:0,111,2872	0/0:19,0:19:54.18:0,54,1369	0/0:19,0:19:54.19:0,54,1411	0/0:18,0:18:48.15:0,48,1201	0/0:16,0:16:42.14:0,42,1035	0/0:22,0:22:63.20:0,63,1597	1/1:4,13:17:39.13:709,39,0	0/1:9,16:24:47.46:891,0,47	0/0:21,1:22:2.63:0,3,1345	0/0:30,0:30:84.29:0,84,2100	0/0:22,0:22:66.23:0,66,1728	0/0:19,0:19:57.20:0,57,1464	0/0:35,0:35:99:0,102,2606	0/0:20,0:20:60.21:0,60,1544	0/0:25,0:25:57.20:0,57,1455	0/0:28,0:28:81.27:0,81,2059	0/0:31,0:31:93.32:0,93,2430	0/0:21,0:21:63.22:0,63,1645	0/0:8,0:8:24.08:0,24,628
chr10	36899131	.	AGGTGGGTGGATGGATGGATGGATT	A	2368.37	PASS	AB=1.000;AC=8;AF=0.143;AN=56;BaseQRankSum=3.595;DP=826;FS=11.456;HRun=0;HaplotypeScore=472.5558;InbreedingCoeff=0.6508;MQ=72.91;MQ0=0;MQRankSum=-5.131;QD=22.77;ReadPosRankSum=0.087;VQSLOD=0.1728;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:60.91:0,61,4537	0/0:13,0:13:36.10:0,36,1605	0/0:41,0:41:12.36:0,12,902	0/0:32,0:28:23.71:0,24,544	1/1:5,16:21:11.99:269,12,0	0/0:31,0:31:75.24:0,75,3995	0/0:28,0:28:48.16:0,48,2057	0/0:36,0:36:57.16:0,57,1157	1/1:5,19:24:12.04:587,12,0	0/0:53,0:53:99:0,129,5680	0/0:17,0:17:36.12:0,36,1742	0/0:29,0:29:57.20:0,57,3293	0/0:30,0:30:63.20:0,63,3100	0/0:35,0:35:81.26:0,81,4532	0/0:36,0:36:87.30:0,87,5118	1/1:4,10:14:6.02:371,6,0	0/1:24,0:24:13.93:1205,0,14	0/1:21,0:21:77.68:78,0,2563	0/0:24,0:24:39.13:0,39,1453	0/0:31,0:31:64.08:0,64,2469	0/0:48,0:48:99:0,108,5325	0/0:23,0:23:51.15:0,51,1703	0/0:20,0:20:39.11:0,39,1268	0/0:31,0:31:66.12:0,66,4538	0/0:36,0:36:93.32:0,93,3571	0/0:48,0:47:99:0,108,5504	0/0:23,0:23:60.15:0,60,3451	0/0:15,0:15:42.08:0,42,1990
chr10	36899137	.	G	GTGGATGGA	1648.12	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=6.451;DP=840;FS=23.342;HRun=0;HaplotypeScore=225.3449;InbreedingCoeff=0.8627;MQ=72.05;MQ0=4;MQRankSum=-6.034;QD=20.60;ReadPosRankSum=0.369;VQSLOD=1.6855;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:28.67:0,29,2265	0/0:12,0:12:36.10:0,36,843	0/0:45,0:40:15.35:0,15,842	0/0:44,0:30:26.50:0,27,439	1/1:21,0:21:8.95:196,9,0	0/0:29,0:29:75.24:0,75,1901	0/0:28,0:28:30.19:0,30,1156	0/0:34,0:34:63.63:0,64,1101	1/1:23,0:23:12.04:347,12,0	0/0:52,0:52:99:0,132,3077	0/0:16,0:16:42.11:0,42,935	0/0:26,0:26:60.19:0,60,1447	0/0:28,0:28:63.19:0,63,1470	0/0:34,0:34:81.26:0,81,1984	0/0:39,0:39:96.28:0,96,2308	1/1:14,0:14:6.02:201,6,0	1/1:15,7:22:23.31:1048,23,0	0/0:24,0:24:0.89:0,1,968	0/0:27,0:26:47.63:0,48,1102	0/0:30,0:30:64.08:0,64,1410	0/0:57,0:57:66.79:0,67,2814	0/0:22,0:22:51.15:0,51,1116	0/0:18,0:18:39.11:0,39,853	0/0:33,0:33:9.41:0,9,1647	0/0:34,0:34:96.33:0,96,2405	0/0:46,0:46:99:0,120,2804	0/0:24,0:24:63.15:0,63,1478	0/0:16,0:16:45.07:0,45,908
chr10	36900444	.	G	GTCTCTTCC	53427.69	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-2.989;DP=605;FS=0.416;HRun=0;HaplotypeScore=162.6375;InbreedingCoeff=0.9979;MQ=69.23;MQ0=0;MQRankSum=-14.260;QD=106.22;ReadPosRankSum=-1.022;VQSLOD=5.1363;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,15:29:75.26:2757,75,0	1/1:2,4:7:21.07:828,21,0	0/0:16,0:16:39.13:0,39,966	0/0:23,0:23:60.21:0,60,1649	1/1:4,14:19:45.15:1889,45,0	1/1:11,14:25:69.19:2360,69,0	1/1:9,6:14:36.11:1195,36,0	1/1:14,9:29:81.26:3169,81,0	1/1:8,14:23:66.23:2492,66,0	1/1:7,16:25:75.24:3046,75,0	1/1:3,8:11:33.11:1147,33,0	0/0:19,0:19:54.19:0,54,1524	1/1:5,19:24:69.24:2999,69,0	1/1:6,11:17:51.17:1956,51,0	1/1:7,23:32:96.33:3891,96,0	1/1:7,16:23:69.18:2594,69,0	1/1:5,9:14:39.12:1562,39,0	1/1:12,9:20:48.13:1933,48,0	1/1:19,9:28:78.25:2955,78,0	1/1:11,15:29:75.26:2914,75,0	1/1:16,11:27:60.21:2115,60,0	1/1:10,12:23:63.17:2224,63,0	0/0:13,0:13:33.11:0,33,934	0/0:31,0:31:93.32:0,93,2632	1/1:6,15:21:54.19:2262,54,0	1/1:9,19:28:81.27:3312,81,0	1/1:8,15:24:69.24:2898,69,0	1/1:4,5:9:21.07:928,21,0
chr10	36900447	.	T	TC	2332.99	PASS	AB=0.989;AC=32;AF=0.571;AN=56;BaseQRankSum=16.378;DP=535;FS=1.554;HRun=1;HaplotypeScore=210.4329;InbreedingCoeff=-0.0446;MQ=72.26;MQ0=0;MQRankSum=-12.213;QD=5.36;ReadPosRankSum=8.808;VQSLOD=-0.0751;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:23:3.67:181,0,4	1/1:6,0:6:12.42:46,12,0	0/0:17,0:17:48.02:0,48,626	0/0:22,0:22:60.20:0,60,839	0/1:17,0:17:39.72:99,0,40	1/1:21,0:21:21.41:147,21,0	0/1:12,1:13:85.58:86,0,88	0/1:20,0:20:43.19:43,0,255	1/1:20,0:20:5.62:128,6,0	0/1:20,0:20:96.40:96,0,122	0/1:10,0:10:26.27:26,0,94	0/0:19,0:19:54.18:0,54,753	1/1:22,0:22:51.83:199,52,0	1/1:15,1:16:16.23:153,16,0	1/1:30,0:30:14.23:236,14,0	1/1:19,0:19:0.39:110,0,0	0/1:15,0:15:48.17:59,0,48	0/1:20,0:19:48.94:49,0,167	0/1:22,0:23:67.17:67,0,337	1/1:23,1:24:7.35:149,7,0	0/1:22,0:22:45.89:46,0,93	0/1:22,0:22:49.52:126,0,50	0/0:11,0:11:33.11:0,33,462	0/0:31,0:31:93.31:0,93,1301	1/1:17,0:17:35.87:137,36,0	0/1:24,1:25:70.66:167,0,71	0/1:21,1:22:47.21:128,0,47	0/1:7,0:7:3.97:34,0,4
chr10	36900492	.	TC	T	8692.80	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=6.195;DP=578;FS=16.029;HRun=9;HaplotypeScore=140.9078;InbreedingCoeff=0.9897;MQ=67.04;MQ0=0;MQRankSum=-7.491;QD=18.26;ReadPosRankSum=2.404;VQSLOD=3.7633;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,24:30:57.02:521,57,0	1/1:1,4:5:14.95:128,15,0	0/0:21,0:19:40.01:0,40,422	0/0:17,0:16:32.65:0,33,318	1/1:4,0:21:20.84:61,21,0	1/1:1,21:22:66.04:603,66,0	1/1:1,15:15:39.02:357,39,0	1/1:6,12:18:35.97:326,36,0	1/1:2,0:19:34.63:102,35,0	1/1:7,14:21:54.01:489,54,0	1/1:0,12:12:21.01:192,21,0	0/0:17,0:17:48.14:0,48,554	1/1:4,21:25:65.73:579,66,0	1/1:2,11:14:35.05:308,35,0	1/1:1,31:32:93.05:848,93,0	1/1:2,0:23:32.59:96,33,0	1/1:0,0:26:50.93:150,51,0	1/1:4,24:28:69.03:631,69,0	1/1:5,16:21:47.98:427,48,0	1/1:3,13:16:30.01:274,30,0	1/1:2,40:42:95.34:846,95,0	1/1:3,20:23:48.02:439,48,0	0/0:13,0:13:27.07:0,27,302	0/0:33,1:34:65.68:0,66,969	1/1:4,11:15:27:247,27,0	1/1:3,18:21:54.03:494,54,0	1/1:4,16:20:48.01:438,48,0	1/1:1,5:6:15:137,15,0
chr10	36901667	.	CG	C	7149.25	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=11.989;DP=723;FS=6.195;HRun=4;HaplotypeScore=71.6770;InbreedingCoeff=0.9993;MQ=94.32;MQ0=0;MQRankSum=-2.346;QD=30.82;ReadPosRankSum=1.416;VQSLOD=5.3539;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,114,1481	1/1:0,7:7:21.06:252,21,0	0/0:33,0:33:88.98:0,89,1173	0/0:31,0:31:74.99:0,75,884	0/0:29,0:29:75.18:0,75,991	0/0:15,0:15:42.11:0,42,552	0/0:32,0:32:90.26:0,90,1220	1/1:0,16:16:48.15:574,48,0	0/0:30,0:30:84.27:0,84,1156	0/0:33,0:33:96.26:0,96,1266	0/0:27,0:27:75.13:0,75,946	0/0:25,0:25:75.23:0,75,1015	1/1:1,25:26:72.22:862,72,0	1/1:2,21:23:54.16:645,54,0	0/0:38,0:38:99:0,114,1553	0/0:24,0:24:72.11:0,72,911	0/0:29,0:29:78.26:0,78,1084	0/0:21,0:21:60.15:0,60,800	1/1:3,18:21:54.15:635,54,0	1/1:2,29:31:83.92:931,84,0	1/1:3,36:39:99:1181,99,0	1/1:2,25:27:69.12:789,69,0	0/0:21,0:21:54.17:0,54,721	0/0:25,0:25:75.23:0,75,1031	1/1:4,20:24:65.99:742,66,0	0/0:27,0:27:81.22:0,81,1088	1/1:1,17:18:45.14:539,45,0	0/0:11,0:11:30.10:0,30,419
chr10	36903269	.	A	AC	3885.32	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-9.611;DP=691;FS=0.000;HRun=7;HaplotypeScore=71.0763;InbreedingCoeff=0.9980;MQ=85.66;MQ0=0;MQRankSum=0.271;QD=22.08;ReadPosRankSum=1.757;VQSLOD=3.4419;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,31:39:51.16:616,51,0	0/0:15,0:15:41.85:0,42,386	0/0:33,0:33:49.97:0,50,633	0/0:21,0:21:32.90:0,33,328	0/0:8,0:8:21.01:0,21,193	1/1:2,17:18:39.12:471,39,0	1/1:8,30:38:75.23:906,75,0	0/0:19,0:19:39.03:0,39,373	0/0:31,0:31:75.10:0,75,722	1/1:5,20:25:28.24:569,28,0	1/1:3,9:12:21.01:236,21,0	0/0:26,0:26:75.11:0,75,718	0/0:20,0:20:54.06:0,54,511	0/0:36,0:36:99:0,102,984	1/1:4,16:20:42.13:507,42,0	0/0:29,0:29:74.93:0,75,702	0/0:49,0:49:99:0,135,1303	1/1:4,19:23:48.15:580,48,0	0/0:18,0:18:41.88:0,42,377	0/0:16,0:16:42.07:0,42,404	0/0:35,0:35:99:0,99,954	0/0:20,0:20:54.08:0,54,518	0/0:16,0:16:39.04:0,39,367	0/0:31,0:31:66.09:0,66,637	0/0:25,0:25:66.10:0,66,636	0/0:25,0:25:75.12:0,75,720	0/0:25,0:24:69.05:0,69,651	0/0:17,0:17:25.72:0,26,317
chr10	36904792	.	CGAGAGAGA	C	714.34	PASS	AB=0.934;AC=19;AF=0.432;AN=44;BaseQRankSum=5.150;DP=417;FS=27.084;HRun=0;HaplotypeScore=102.8906;InbreedingCoeff=0.4639;MQ=67.48;MQ0=12;MQRankSum=-5.025;QD=3.68;ReadPosRankSum=1.314;VQSLOD=-0.0867;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:35,0:35:2.79:13,3,0	0/0:1,0:1:3.01:0,3,88	./.	0/1:28,0:18:0:0,0,0	./.	1/1:8,2:10:3.01:75,3,0	0/1:21,3:24:55.68:56,0,103	0/0:33,0:33:19.46:0,19,345	1/1:12,0:14:5.43:110,5,0	./.	1/1:4,1:5:3.01:74,3,0	1/1:6,2:9:5.91:90,6,0	0/0:12,0:12:9.02:0,9,156	0/0:19,0:19:27.09:0,27,909	0/0:10,0:10:3:0,3,25	1/1:4,0:9:12.51:224,13,0	1/1:20,4:24:3.01:75,3,0	1/1:12,1:13:8.81:136,9,0	0/0:17,0:16:13.29:0,13,407	./.	0/0:35,0:35:32.89:0,33,882	./.	./.	0/1:19,0:21:3.83:4,0,56	0/0:9,0:10:2.83:0,3,64	0/0:11,0:11:0.89:0,1,2	0/0:11,0:11:9.03:0,9,301	0/0:8,0:8:6.02:0,6,84
chr10	36904971	.	G	GCCCCT	625.03	PASS	AB=1.000;AC=17;AF=0.354;AN=48;BaseQRankSum=-2.957;DP=167;FS=0.000;HRun=0;HaplotypeScore=40.0024;InbreedingCoeff=0.6086;MQ=87.74;MQ0=0;MQRankSum=-1.419;QD=12.76;ReadPosRankSum=0.292;VQSLOD=1.9551;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:27.09:0,27,512	./.	0/0:12,0:11:15.04:0,15,262	0/1:7,0:7:0.85:1,0,23	0/0:7,0:7:14.98:0,15,216	./.	0/0:7,0:7:14.57:0,15,290	1/1:10,0:10:3:27,3,0	0/0:7,0:7:14.92:0,15,283	0/0:7,0:7:12.04:0,12,231	./.	0/0:8,0:8:18.06:0,18,349	1/1:2,0:2:3.01:80,3,0	1/1:0,2:2:3.01:88,3,0	0/0:7,0:7:15.05:0,15,268	0/0:3,0:3:5.82:0,6,115	0/0:10,0:10:15.05:0,15,291	./.	0/0:2,0:2:2.97:0,3,20	1/1:5,5:10:6.02:176,6,0	1/1:3,4:7:2.99:88,3,0	1/1:2,3:5:6.02:176,6,0	0/0:10,0:10:21.07:0,21,405	0/0:10,0:10:21.03:0,21,406	1/1:3,0:3:3.01:49,3,0	0/0:3,0:3:9.02:0,9,123	1/1:1,2:3:3.01:88,3,0	0/0:2,0:2:6.02:0,6,116
chr10	36905849	.	GGGGC	G	4959.23	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=7.742;DP=416;FS=1.024;HRun=0;HaplotypeScore=105.0823;InbreedingCoeff=0.8783;MQ=71.33;MQ0=1;MQRankSum=-2.056;QD=16.98;ReadPosRankSum=1.343;VQSLOD=4.6149;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:19,4:23:20.63:233,21,0	1/1:4,0:4:6.01:57,6,0	0/0:18,0:14:14.23:0,14,370	0/0:13,0:11:7.96:0,8,209	0/0:2,0:2:3.01:0,3,61	1/1:20,3:23:50.54:480,51,0	1/1:20,4:24:32.17:295,32,0	1/1:15,0:15:36.03:287,36,0	0/0:5,0:5:0.23:0,0,68	1/1:13,0:13:26.71:196,27,0	1/1:10,0:10:10.71:50,11,0	0/0:18,0:18:42.14:0,42,969	1/1:21,0:21:47.72:396,48,0	1/1:15,0:15:32.95:290,33,0	1/1:12,2:14:26.71:223,27,0	0/0:4,0:4:5.81:0,6,55	0/0:12,0:12:15.05:0,15,288	1/1:10,2:12:26.15:214,26,0	1/1:18,0:18:47.63:390,48,0	1/1:15,0:15:32.82:278,33,0	1/1:27,0:27:47.98:434,48,0	1/1:20,0:20:38.75:314,39,0	0/0:8,0:8:21.07:0,21,475	0/0:31,0:31:77.99:0,78,1790	1/1:20,0:20:53.95:476,54,0	0/0:8,0:8:15.04:0,15,326	1/1:18,0:17:41.71:346,42,0	0/0:5,0:5:15.05:0,15,333
chr10	36905850	.	GGGC	G	8317.75	PASS	AB=1.000;AC=35;AF=0.625;AN=56;BaseQRankSum=4.682;DP=411;FS=0.478;HRun=0;HaplotypeScore=86.0326;InbreedingCoeff=0.8384;MQ=71.46;MQ0=1;MQRankSum=-2.505;QD=28.20;ReadPosRankSum=1.266;VQSLOD=4.5044;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,15:23:20.97:219,21,0	1/1:1,3:4:6.02:93,6,0	0/0:19,0:15:16.59:0,17,308	0/0:12,0:10:6.71:0,7,162	0/0:2,0:2:3.01:0,3,58	1/1:15,8:23:54.54:593,55,0	1/1:8,16:24:33.02:400,33,0	1/1:1,14:15:39.02:468,39,0	0/1:5,0:5:22.66:23,0,44	1/1:1,11:12:30.07:393,30,0	1/1:3,7:10:12.51:175,13,0	0/0:18,0:18:41.70:0,42,787	1/1:1,20:21:51.14:762,51,0	1/1:1,14:15:33.11:508,33,0	1/1:2,12:14:27.55:377,28,0	0/0:3,0:3:5.67:0,6,35	0/0:12,0:12:14.07:0,14,196	1/1:2,10:12:27.07:378,27,0	1/1:2,16:18:48.07:628,48,0	1/1:2,13:15:33.11:500,33,0	1/1:0,27:27:48.16:732,48,0	1/1:5,15:20:39.13:599,39,0	0/0:7,0:7:21.07:0,21,389	0/0:29,0:29:77.41:0,77,1474	1/1:1,18:19:54.18:823,54,0	0/0:9,0:9:18.04:0,18,301	1/1:4,14:17:42.14:647,42,0	0/0:5,0:5:15.05:0,15,285
chr10	36906932	.	GA	G	1845.65	PASS	AB=0.762;AC=22;AF=0.393;AN=56;BaseQRankSum=1.642;DP=415;FS=3.979;HRun=13;HaplotypeScore=69.7325;InbreedingCoeff=0.5001;MQ=82.87;MQ0=4;MQRankSum=-2.865;QD=11.39;ReadPosRankSum=0.504;VQSLOD=3.4927;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,1:19:12.03:0,12,384	1/1:1,8:10:25.90:181,26,0	0/0:49,0:21:29.08:0,29,198	0/0:39,0:21:3.93:0,4,78	0/0:18,0:19:50.90:0,51,470	0/0:11,0:11:27.04:0,27,261	0/0:6,0:6:14.86:0,15,128	0/1:10,6:15:16.74:163,0,17	0/0:10,0:10:23.97:0,24,215	0/0:9,1:11:1.74:0,2,156	0/0:15,1:16:19.17:0,19,327	0/0:13,0:14:11.74:0,12,256	0/1:5,6:12:0.27:151,0,0	1/1:4,3:7:10.96:72,11,0	0/1:13,0:12:0.90:1,0,135	0/0:10,0:10:21.03:0,21,204	0/0:15,0:16:41.87:0,42,380	0/0:13,1:16:10.14:0,10,278	1/1:2,10:11:29.83:218,30,0	1/1:3,9:13:2.69:174,3,0	0/1:2,3:5:14.30:68,0,14	1/1:7,3:10:3.19:104,3,0	0/0:13,0:13:27.41:0,27,306	0/1:4,0:5:17.78:18,0,45	1/1:10,7:17:41.43:288,41,0	1/1:3,9:12:26.84:196,27,0	1/1:10,9:20:43.01:290,43,0	0/1:3,6:10:32.44:111,0,32
chr10	36906956	.	T	TA	3730.67	PASS	AB=0.828;AC=32;AF=0.571;AN=56;BaseQRankSum=2.698;DP=435;FS=7.366;HRun=11;HaplotypeScore=75.2155;InbreedingCoeff=0.6094;MQ=79.70;MQ0=2;MQRankSum=-0.941;QD=11.44;ReadPosRankSum=-1.499;VQSLOD=2.7180;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:41.79:0,42,325	1/1:2,10:12:21.01:203,21,0	0/1:42,1:22:18.54:19,0,53	0/1:31,0:16:8.82:9,0,14	1/1:21,0:21:49.87:307,50,0	0/0:12,0:12:20.87:0,21,160	0/0:4,0:4:8.95:0,9,68	1/1:8,19:27:60.07:594,60,0	1/1:13,0:13:32.53:226,33,0	0/1:14,1:15:0.77:1,0,168	0/0:10,1:12:14.48:0,14,102	0/0:13,0:14:22.91:0,23,166	0/1:8,5:13:2.21:154,0,2	0/1:5,6:11:2.37:141,0,2	0/0:8,0:8:8.89:0,9,70	1/1:9,0:9:17.27:95,17,0	1/1:19,0:19:49.64:302,50,0	0/0:16,0:16:29.88:0,30,232	1/1:2,16:17:30.45:394,30,0	0/1:8,7:15:22.47:143,0,22	1/1:3,3:6:9.02:91,9,0	1/1:3,7:10:4.63:145,5,0	0/0:13,0:14:34.88:0,35,259	0/0:10,0:10:14.90:0,15,116	1/1:6,9:15:21.04:213,21,0	1/1:13,0:13:29.14:184,29,0	1/1:10,12:22:33.04:318,33,0	1/1:10,0:10:29.52:193,30,0
chr10	36906965	.	A	AC	2856.66	PASS	AB=1.000;AC=16;AF=0.286;AN=56;BaseQRankSum=5.261;DP=446;FS=7.995;HRun=0;HaplotypeScore=73.8697;InbreedingCoeff=0.5355;MQ=72.96;MQ0=1;MQRankSum=-0.389;QD=15.78;ReadPosRankSum=8.318;VQSLOD=4.4280;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:63.08:0,63,751	0/1:13,0:13:22.65:23,0,86	0/0:34,0:19:7.50:0,8,238	0/0:24,0:12:7.71:0,8,107	1/1:4,20:24:59.50:725,60,0	0/0:10,0:10:27.07:0,27,344	0/0:6,0:6:18:0,18,196	0/1:28,0:27:12.30:12,0,166	1/1:0,13:13:33.11:439,33,0	0/0:15,0:15:41.09:0,41,500	0/0:11,0:11:27.05:0,27,303	0/0:12,0:12:36:0,36,411	0/0:13,0:13:0.15:0,0,162	0/0:12,0:12:3.15:0,3,122	0/0:10,0:10:27.51:0,28,287	1/1:0,11:12:17.97:221,18,0	1/1:2,20:22:50.89:676,51,0	0/0:15,0:15:36.08:0,36,463	0/1:20,0:19:34.47:34,0,91	0/0:14,0:14:13.35:0,13,212	0/0:9,0:9:10.17:0,10,126	0/0:10,0:10:1.84:0,2,97	0/0:16,0:16:42.51:0,43,527	0/0:15,0:15:39.01:0,39,411	0/0:17,0:17:2.68:0,3,194	1/1:1,13:14:42.08:502,42,0	0/1:21,0:21:2.34:2,0,176	1/1:0,14:14:30.10:406,30,0
chr10	36908458	.	C	CT	1399.42	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-5.149;DP=613;FS=0.000;HRun=0;HaplotypeScore=59.5679;InbreedingCoeff=0.9953;MQ=68.24;MQ0=5;MQRankSum=-0.587;QD=37.82;ReadPosRankSum=1.747;VQSLOD=3.5510;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:75.28:0,75,1131	0/0:7,0:7:21.07:0,21,287	0/0:38,0:23:55.86:0,56,639	0/0:39,0:23:31.49:0,31,620	0/0:19,0:19:57.15:0,57,744	0/0:22,0:22:63.21:0,63,880	0/0:17,0:17:51.16:0,51,689	0/0:42,0:42:99:0,111,1476	0/0:13,0:13:39.12:0,39,525	0/0:28,0:28:84.25:0,84,1126	0/0:10,0:10:27.09:0,27,369	0/0:19,0:19:57.18:0,57,781	0/0:25,0:25:72.23:0,72,991	0/0:18,0:18:54.18:0,54,751	0/0:15,0:15:45.14:0,45,612	0/0:20,0:20:57.19:0,57,793	0/0:26,1:27:25.70:0,26,898	0/0:21,0:21:63.20:0,63,863	0/0:17,0:17:48.15:0,48,654	0/0:15,0:15:45.15:0,45,629	0/0:28,0:28:84.20:0,84,1100	0/0:13,0:13:36.10:0,36,461	0/0:15,0:15:45.14:0,45,608	0/0:32,0:32:90.27:0,90,1208	0/0:19,0:19:57.18:0,57,781	1/1:1,22:23:24.25:911,24,0	0/0:25,0:25:63.16:0,63,837	1/1:0,14:14:39.13:610,39,0
chr10	36911298	.	CGTTT	C	8538.35	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=14.992;DP=725;FS=9.715;HRun=0;HaplotypeScore=114.3970;InbreedingCoeff=0.9945;MQ=67.76;MQ0=1;MQRankSum=1.428;QD=25.72;ReadPosRankSum=3.673;VQSLOD=4.3355;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,20:29:51.17:788,51,0	0/0:15,0:15:33.11:0,33,779	0/0:25,0:22:15.03:0,15,265	0/0:29,0:24:21.50:0,21,414	1/1:13,18:31:48.09:725,48,0	1/1:7,14:21:30.10:471,30,0	1/1:12,15:27:27.09:424,27,0	0/0:27,0:27:24.08:0,24,556	1/1:4,17:21:36.12:566,36,0	1/1:9,17:27:54.11:800,54,0	1/1:8,15:22:45.15:696,45,0	0/0:24,0:24:48.16:0,48,1096	0/0:20,0:20:39.13:0,39,879	0/0:23,0:23:36.12:0,36,818	1/1:11,24:35:57.19:895,57,0	1/1:11,15:26:30.10:464,30,0	1/1:7,18:25:51.17:801,51,0	1/1:4,11:15:30.10:471,30,0	0/0:20,0:20:30.10:0,30,701	0/0:38,0:38:54.17:0,54,1169	0/0:27,1:28:16.07:0,16,1346	0/0:29,0:29:63.22:0,63,1491	0/0:30,0:30:57.20:0,57,1332	0/0:32,0:32:75.26:0,75,1704	0/0:25,0:25:42.14:0,42,973	1/1:13,24:37:69.22:1059,69,0	0/0:28,0:28:60.21:0,60,1347	1/1:6,9:15:24.08:377,24,0
chr10	36912491	.	GA	G	35.66	PASS	AC=4;AF=0.074;AN=54;BaseQRankSum=2.460;DP=99;FS=0.000;HRun=1;HaplotypeScore=21.3152;InbreedingCoeff=0.3544;MQ=74.82;MQ0=0;MQRankSum=-0.388;QD=5.94;ReadPosRankSum=0.405;VQSLOD=0.3513;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:23.98:0,24,282	0/0:2,0:2:3:0,3,25	0/0:5,0:4:12.03:0,12,152	0/0:6,0:5:4.10:0,4,78	0/0:3,0:3:6.02:0,6,85	./.	0/0:6,0:6:15.05:0,15,219	0/0:5,0:5:15.04:0,15,188	0/0:2,0:2:5.99:0,6,50	0/0:2,0:2:6.02:0,6,86	0/0:4,0:4:8.16:0,8,49	0/0:2,0:2:6.02:0,6,88	0/0:1,0:1:2.96:0,3,19	0/0:3,0:3:6:0,6,88	0/0:4,0:4:12.04:0,12,169	0/0:3,0:3:8.06:0,8,93	0/0:5,0:5:9:0,9,111	0/0:4,0:4:8.45:0,8,80	0/0:3,0:3:6.02:0,6,88	0/0:3,0:3:9.02:0,9,113	0/0:4,0:4:9.02:0,9,113	0/0:5,0:5:14.99:0,15,168	0/0:3,0:3:8.95:0,9,86	0/0:2,0:2:3.01:0,3,44	0/0:5,0:5:15.05:0,15,219	1/1:0,5:5:14.93:114,15,0	0/0:2,0:2:6.02:0,6,88	1/1:0,1:1:2.99:23,3,0
chr10	36914785	.	AACACACAC	A	1907.04	PASS	AB=0.914;AC=27;AF=0.675;AN=40;BaseQRankSum=2.788;DP=480;FS=17.824;HRun=0;HaplotypeScore=130.3543;InbreedingCoeff=0.1404;MQ=67.81;MQ0=23;MQRankSum=-0.452;QD=6.27;ReadPosRankSum=0.776;VQSLOD=1.6512;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:2,0:5:2.88:0,3,15	./.	./.	./.	1/1:12,0:15:12.03:219,12,0	1/1:17,1:20:6.32:77,6,0	0/0:17,0:17:8.24:0,8,84	1/1:14,2:17:18.03:374,18,0	1/1:11,0:14:3.48:57,3,0	1/1:2,0:5:1.25:3,1,0	0/1:16,0:17:7.10:7,0,83	./.	0/1:9,0:14:0:0,0,0	./.	1/1:13,3:17:12.04:247,12,0	1/1:17,8:23:6.02:134,6,0	1/1:14,0:15:6:112,6,0	0/1:11,0:11:1.78:184,0,2	0/1:12,0:17:4.83:5,0,83	0/1:23,0:21:2.05:155,0,2	0/0:9,4:13:0:0,0,0	./.	0/1:24,0:24:10.58:11,0,58	1/1:10,0:10:3.04:27,3,0	1/1:17,6:20:10.33:355,10,0	0/1:27,0:25:57.43:57,0,59	./.
chr10	36914834	.	ACACACT	A	2260.51	PASS	AB=0.951;AC=28;AF=0.560;AN=50;BaseQRankSum=3.741;DP=488;FS=1.955;HRun=0;HaplotypeScore=115.9319;InbreedingCoeff=-0.1973;MQ=39.48;MQ0=67;MQRankSum=3.215;QD=5.17;ReadPosRankSum=2.841;VQSLOD=2.3260;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:36,0:30:20.49:136,20,0	0/0:9,0:8:3.68:0,4,15	./.	./.	0/1:12,0:9:0:0,0,0	1/1:17,0:13:17.23:207,17,0	0/1:31,0:26:4.71:5,0,27	0/0:16,0:15:40.88:0,41,292	0/1:18,0:18:7.49:205,0,7	0/1:12,0:8:2.12:91,0,2	0/1:12,0:9:0:0,0,0	0/1:22,2:20:30.52:59,0,31	0/1:17,0:14:40.84:41,0,52	1/1:17,0:16:11.18:49,11,0	1/1:23,0:22:7.48:73,7,0	0/1:23,0:21:10.66:129,0,11	0/1:16,0:14:34.57:35,0,72	0/1:14,0:9:23.03:87,0,23	0/1:7,9:14:48.21:297,0,48	1/1:14,0:13:9.70:89,10,0	1/1:26,0:21:25.69:390,26,0	0/1:22,0:21:27.79:28,0,34	0/0:22,0:20:3.60:0,4,62	0/1:26,1:20:55.86:56,0,59	0/1:19,0:19:8.01:123,0,8	0/1:21,0:15:61.98:216,0,62	0/1:11,9:16:56.45:92,0,56	./.
chr10	36914840	.	TGAGA	T	244.57	PASS	AB=1.000;AC=9;AF=0.188;AN=48;BaseQRankSum=-0.783;DP=531;FS=0.000;HRun=0;HaplotypeScore=119.9469;InbreedingCoeff=0.4089;MQ=38.94;MQ0=64;MQRankSum=1.780;QD=2.09;ReadPosRankSum=1.231;VQSLOD=2.2474;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:34:24.97:0,25,386	0/0:9,0:8:0:0,0,0	./.	./.	./.	0/0:17,0:14:6.02:0,6,101	0/0:29,0:30:8.90:0,9,67	0/0:23,0:22:18.03:0,18,289	1/1:15,1:17:6.02:86,6,0	0/0:17,0:13:26.37:0,26,443	./.	0/0:24,0:21:22.52:0,23,412	0/0:18,0:15:9.03:0,9,167	0/0:18,0:18:18.82:0,19,208	0/0:25,0:24:12.04:0,12,204	1/1:16,7:22:2.63:46,3,0	1/1:16,0:14:11.83:186,12,0	0/0:17,0:12:27.09:0,27,478	0/1:17,0:15:24.34:24,0,125	0/1:17,0:16:1.80:2,0,10	0/1:26,0:21:26.98:27,0,167	0/0:26,0:24:9.16:0,9,245	0/0:24,0:22:14.79:0,15,285	0/0:24,0:21:14.61:0,15,261	0/0:18,0:18:5.21:0,5,82	0/0:26,0:20:12.04:0,12,235	0/0:18,0:15:5.98:0,6,58	0/0:5,0:1:1.25:0,1,3
chr10	36915085	.	T	TCATCCTCCAC	23684.83	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-4.235;DP=685;FS=3.279;HRun=0;HaplotypeScore=191.9017;InbreedingCoeff=0.9967;MQ=76.20;MQ0=0;MQRankSum=-17.963;QD=120.84;ReadPosRankSum=-1.669;VQSLOD=4.9960;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:23,15:45:99:4390,102,0	0/0:9,0:9:24.08:0,24,676	0/0:24,0:24:60.19:0,60,1741	0/0:10,0:10:22.89:0,23,537	0/0:22,0:22:66.21:0,66,2125	1/1:3,13:18:48.16:2419,48,0	1/1:11,18:29:87.30:4207,87,0	0/0:33,0:33:96.28:0,96,2904	0/0:31,0:31:93.31:0,93,3011	1/1:7,7:16:45.12:2213,45,0	1/1:10,7:19:30.10:1434,30,0	0/0:31,0:31:84.29:0,84,2777	0/0:26,0:26:75.26:0,75,2451	0/0:34,0:34:99:0,99,3190	1/1:7,12:24:60.21:2827,60,0	0/0:29,0:29:78.25:0,78,2526	0/0:36,0:36:99:0,105,3451	1/1:8,6:16:42.14:2159,42,0	0/0:22,0:22:63.21:0,63,1968	0/0:19,0:19:54.19:0,54,1730	0/0:48,0:48:99:0,135,4331	0/0:21,0:21:63.22:0,63,2097	0/0:20,0:20:57.17:0,57,1805	0/0:24,0:24:72.25:0,72,2398	0/0:23,0:23:69.24:0,69,2277	1/1:6,15:24:72.22:3321,72,0	0/0:27,0:26:78.21:0,78,2350	1/1:1,4:5:15.05:715,15,0
chr10	36917232	.	AGAGG	A	3780.64	PASS	AB=0.944;AC=15;AF=0.268;AN=56;BaseQRankSum=8.209;DP=394;FS=1.676;HRun=0;HaplotypeScore=90.1801;InbreedingCoeff=0.8193;MQ=75.36;MQ0=6;MQRankSum=-7.264;QD=28.00;ReadPosRankSum=0.333;VQSLOD=3.0806;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:25,14:39:25.95:964,26,0	0/0:2,0:2:6.02:0,6,149	0/0:24,0:14:8.71:0,9,109	0/0:31,0:21:31.69:0,32,615	0/0:10,0:10:18.05:0,18,377	1/1:2,10:12:30.10:484,30,0	1/1:7,7:14:20.77:352,21,0	0/0:15,0:14:27.09:0,27,583	0/0:8,0:8:21.07:0,21,520	1/1:6,10:16:36.07:567,36,0	1/1:5,9:14:33.11:513,33,0	0/0:10,0:10:21.06:0,21,437	0/0:9,0:9:21.02:0,21,418	0/0:10,0:9:24.07:0,24,543	1/1:2,12:14:39.13:628,39,0	0/0:11,0:10:12.04:0,12,254	0/0:21,0:21:48.07:0,48,1005	1/1:3,6:9:15.05:255,15,0	0/0:13,0:13:27.03:0,27,519	0/0:4,0:3:6.02:0,6,149	0/0:22,0:22:42.11:0,42,855	0/0:7,0:7:18.04:0,18,351	0/0:14,0:14:12.04:0,12,280	0/0:15,0:15:27.09:0,27,649	0/0:12,0:11:30.09:0,30,673	0/1:16,1:17:17.81:18,0,576	0/0:14,0:13:27.08:0,27,602	0/0:7,0:7:3.01:0,3,73
chr10	36917269	.	GA	G	1233.47	PASS	AB=0.955;AC=20;AF=0.370;AN=54;BaseQRankSum=-2.726;DP=368;FS=0.636;HRun=1;HaplotypeScore=87.6899;InbreedingCoeff=0.7645;MQ=44.84;MQ0=31;MQRankSum=1.719;QD=15.42;ReadPosRankSum=-1.739;VQSLOD=2.9672;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:35:31.57:0,32,260	1/1:0,1:1:3.01:34,3,0	0/0:36,0:1:0:0,0,0	0/0:42,0:6:8.97:0,9,90	0/0:5,0:4:12.02:0,12,152	0/0:20,0:20:25.63:0,26,182	0/0:12,0:11:23.84:0,24,189	1/1:2,14:14:32.90:356,33,0	0/0:11,0:11:20.97:0,21,238	0/0:16,0:16:34.92:0,35,245	0/0:13,0:13:12.82:0,13,80	0/1:9,1:9:3.36:3,0,162	1/1:0,8:8:6.02:75,6,0	1/1:0,3:3:9.03:117,9,0	0/0:18,0:18:34.36:0,34,293	0/1:10,0:9:3.80:4,0,27	0/0:20,0:18:37.49:0,37,498	0/0:7,0:7:20.63:0,21,161	1/1:0,5:5:15.05:202,15,0	1/1:0,5:4:12.04:166,12,0	1/1:3,7:8:15.05:209,15,0	./.	0/0:10,0:9:21.06:0,21,272	0/0:12,0:12:20.62:0,21,211	1/1:3,3:6:14.96:154,15,0	0/0:10,0:10:28.08:0,28,251	1/1:1,5:5:8.99:103,9,0	0/0:14,0:13:12.04:0,12,67
chr10	36917274	.	GGGGAGAGAGAGAGAGAGAGAGAGAGA	G	6787.42	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=6.915;DP=374;FS=11.203;HRun=0;HaplotypeScore=169.2488;InbreedingCoeff=0.7529;MQ=43.07;MQ0=35;MQRankSum=-5.913;QD=35.17;ReadPosRankSum=4.539;VQSLOD=2.9686;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:15,23:36:25.78:712,26,0	0/0:1,0:1:3.01:0,3,157	1/1:32,0:1:1.25:3,1,0	0/1:37,0:4:2.20:2,0,6	0/0:9,0:7:18.05:0,18,1088	1/1:2,17:19:39.07:2272,39,0	1/1:12,0:11:14.26:201,14,0	0/0:17,0:14:32.96:0,33,982	0/0:11,0:11:17.87:0,18,779	1/1:5,10:15:35.99:1116,36,0	1/1:3,10:14:17.97:917,18,0	0/0:12,0:11:30.07:0,30,1387	0/0:10,0:10:10.68:0,11,294	0/0:4,0:3:9:0,9,275	1/1:10,8:18:32.75:1069,33,0	0/0:12,0:11:8.24:0,8,425	0/0:21,0:19:39.08:0,39,2387	1/1:7,1:7:17.92:495,18,0	0/0:5,0:5:9.46:0,9,377	0/0:5,0:4:11.95:0,12,419	0/0:11,0:9:14.38:0,14,350	0/0:6,0:4:3.01:0,3,89	0/0:11,0:10:21.06:0,21,1582	0/0:13,0:13:21.46:0,21,852	0/0:4,0:4:11.99:0,12,235	0/0:10,0:10:0.43:0,0,1675	0/0:6,0:5:9.03:0,9,412	0/0:13,0:11:6.02:0,6,577
chr10	36917276	.	G	GGAGA	438.63	PASS	AB=0.638;AC=11;AF=0.239;AN=46;BaseQRankSum=-4.118;DP=370;FS=0.000;HRun=0;HaplotypeScore=101.2675;InbreedingCoeff=0.2620;MQ=43.23;MQ0=35;MQRankSum=2.958;QD=4.72;ReadPosRankSum=-2.481;VQSLOD=1.5052;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:35:0.39:0,0,2	0/0:0,0:1:3:0,3,28	./.	./.	0/0:10,0:8:8.98:0,9,107	0/0:19,0:19:23.11:0,23,161	0/0:15,0:14:0:0,0,0	0/0:16,0:13:3.01:0,3,35	1/1:6,5:12:6.02:142,6,0	0/0:14,0:14:11.22:0,11,60	0/0:13,0:13:11.24:0,11,96	1/1:13,0:12:8.26:83,8,0	0/0:9,0:10:2.65:0,3,27	0/0:3,0:3:3:0,3,28	0/0:16,0:16:9.80:0,10,31	0/1:1,0:12:34.12:34,0,38	0/1:9,9:18:31.87:268,0,32	0/0:7,0:6:5.37:0,5,36	./.	./.	1/1:11,0:9:2.22:7,2,0	./.	1/1:9,0:11:5.49:24,5,0	0/1:8,0:12:6.52:7,0,39	0/0:3,0:4:3:0,3,25	0/0:9,0:9:5.89:0,6,68	0/0:4,0:4:2.50:0,2,9	0/0:13,0:11:6.02:0,6,65
chr10	36917287	.	G	GGA	1201.07	PASS	AB=0.991;AC=13;AF=0.241;AN=54;BaseQRankSum=7.067;DP=371;FS=0.000;HRun=0;HaplotypeScore=110.4767;InbreedingCoeff=0.3955;MQ=46.51;MQ0=34;MQRankSum=-5.985;QD=10.27;ReadPosRankSum=2.467;VQSLOD=3.2038;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:36,1:35:48.59:105,0,49	0/0:1,0:1:3:0,3,26	./.	0/0:36,0:6:1.34:0,1,25	0/0:12,0:10:30.08:0,30,430	1/1:18,1:19:1.25:392,1,0	1/1:10,2:11:8.20:150,8,0	0/0:20,0:17:27.88:0,28,312	0/0:13,0:13:17.03:0,17,187	0/1:12,0:12:3.75:171,0,4	1/1:11,0:11:14.18:130,14,0	0/0:13,0:12:29.02:0,29,294	0/0:11,0:11:5.79:0,6,49	0/0:7,0:6:5.63:0,6,87	0/1:15,0:15:33.38:256,0,33	0/0:12,0:12:8.52:0,9,106	0/0:18,0:16:26.46:0,26,283	1/1:5,1:5:0.58:127,1,0	0/0:5,0:4:9.48:0,9,118	0/0:4,0:4:4.16:0,4,80	0/0:14,0:12:10.39:0,10,140	1/1:5,0:3:3.79:18,4,0	0/0:12,0:11:15.27:0,15,194	0/0:10,0:10:10.11:0,10,143	0/0:5,0:4:8.96:0,9,111	0/0:14,0:14:36.59:0,37,542	0/0:7,0:6:8.43:0,8,101	0/0:13,0:8:8.62:0,9,92
chr10	36917293	.	GA	G	285.39	PASS	AB=0.968;AC=15;AF=0.268;AN=56;BaseQRankSum=9.271;DP=333;FS=4.709;HRun=1;HaplotypeScore=76.6960;InbreedingCoeff=0.7718;MQ=47.01;MQ0=31;MQRankSum=-7.138;QD=2.55;ReadPosRankSum=5.930;VQSLOD=-0.5231;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:24:11.07:52,11,0	0/0:1,0:1:2.04:0,2,6	0/0:21,0:1:3.01:0,3,38	0/1:29,1:7:1.48:1,0,76	0/0:14,0:12:36.12:0,36,503	1/1:18,0:18:30.52:121,31,0	1/1:1,4:4:11.66:67,12,0	0/0:21,0:18:54.09:0,54,658	0/0:12,0:12:14.06:0,14,140	1/1:10,0:10:13.17:78,13,0	1/1:11,0:11:12.52:48,13,0	0/0:13,0:12:30.09:0,30,422	0/0:9,0:9:10.92:0,11,96	0/0:7,0:6:10.85:0,11,118	1/1:8,0:8:13.23:53,13,0	0/0:11,0:11:8.85:0,9,130	0/0:19,0:17:30.05:0,30,337	1/1:2,2:3:8.06:46,8,0	0/0:6,0:4:12.04:0,12,151	0/0:4,0:4:10.27:0,10,117	0/0:12,0:11:14.08:0,14,152	0/0:7,0:5:12.04:0,12,151	0/0:13,0:12:21.53:0,22,249	0/0:11,0:11:15:0,15,173	0/0:5,0:4:8.87:0,9,112	0/0:15,0:15:45.14:0,45,582	0/0:8,0:7:13.28:0,13,153	0/0:12,0:7:5.97:0,6,46
chr10	36917409	.	C	CT	3197.75	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=-11.817;DP=479;FS=4.380;HRun=11;HaplotypeScore=70.5829;InbreedingCoeff=0.8452;MQ=86.95;MQ0=3;MQRankSum=-0.754;QD=16.57;ReadPosRankSum=-2.392;VQSLOD=3.6973;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:0,0:25:44.82:0,45,132	1/1:4,8:12:27.05:273,27,0	0/0:30,1:27:0.82:0,1,166	0/1:23,0:15:5.08:5,0,36	0/0:14,1:15:8.39:0,8,246	0/0:3,0:21:36.66:0,37,108	0/0:1,0:16:24.44:0,24,72	1/1:8,25:33:75.10:736,75,0	0/0:12,0:12:26.86:0,27,204	0/0:6,0:25:37.12:0,37,108	0/0:7,0:25:32.57:0,33,96	0/0:7,0:8:13.96:0,14,99	1/1:3,12:15:27.05:274,27,0	1/1:1,12:14:35.91:347,36,0	0/0:2,0:16:22.40:0,22,66	0/0:12,0:12:23.87:0,24,181	0/0:14,0:14:41.83:0,42,324	0/0:0,0:19:34.63:0,35,102	1/1:1,10:11:30.06:305,30,0	1/1:6,13:19:18.76:349,19,0	1/1:2,7:9:18.04:183,18,0	1/1:4,14:18:6.82:251,7,0	0/0:14,0:14:29.87:0,30,232	0/0:3,0:3:5.98:0,6,46	1/1:3,17:20:24.86:434,25,0	0/0:17,0:18:43.87:0,44,331	1/1:5,13:17:6.82:251,7,0	0/0:11,0:11:11.90:0,12,93
chr10	36919895	.	A	ACCTT	1814	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=3.468;DP=745;FS=0.722;HRun=0;HaplotypeScore=125.2055;InbreedingCoeff=0.9986;MQ=87.30;MQ0=0;MQRankSum=-6.285;QD=53.35;ReadPosRankSum=0.466;VQSLOD=4.6007;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,99,1720	0/0:10,0:10:27.09:0,27,467	0/0:42,0:42:85.15:0,85,1397	0/0:34,0:31:66.13:0,66,1121	0/0:21,0:21:48.16:0,48,834	0/0:18,0:18:48.16:0,48,818	0/0:24,0:24:60.21:0,60,1043	0/0:30,0:30:51.17:0,51,879	0/0:36,0:36:99:0,102,1769	0/0:31,0:31:81.28:0,81,1402	0/0:10,0:10:30.10:0,30,522	0/0:28,0:28:75.23:0,75,1275	0/0:28,0:28:69.22:0,69,1172	0/0:33,0:33:87.28:0,87,1467	0/0:32,0:32:90.27:0,90,1509	0/0:25,0:25:60.21:0,60,1043	0/0:32,0:32:87.28:0,87,1478	0/0:25,0:25:66.22:0,66,1127	0/0:17,0:16:39.13:0,39,678	0/0:26,0:26:60.20:0,60,1042	0/0:56,0:56:99:0,151,2599	0/0:25,0:25:69.24:0,69,1185	0/0:11,0:11:27.08:0,27,442	0/0:23,0:23:66.23:0,66,1146	0/0:23,0:22:51.17:0,51,879	1/1:10,12:22:45.14:1030,45,0	0/0:29,0:29:75.26:0,75,1296	1/1:2,10:12:36.12:905,36,0
chr10	36919920	.	G	GTGTC	2241.08	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.400;DP=807;FS=0.000;HRun=0;HaplotypeScore=136.7613;InbreedingCoeff=0.9990;MQ=77.52;MQ0=0;MQRankSum=-8.596;QD=65.91;ReadPosRankSum=0.745;VQSLOD=5.6501;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,132,2251	0/0:11,0:11:30.10:0,30,530	0/0:48,0:42:72.21:0,72,1290	0/0:55,0:46:88.21:0,88,1352	0/0:14,0:14:35.78:0,36,563	0/0:13,0:13:33.11:0,33,570	0/0:31,0:31:81.24:0,81,1359	0/0:35,0:35:87.28:0,87,1469	0/0:40,0:40:99:0,108,1850	0/0:25,0:25:66.22:0,66,1131	0/0:11,0:11:27.09:0,27,471	0/0:36,0:36:99:0,99,1727	0/0:26,0:26:66.23:0,66,1148	0/0:25,0:25:72.22:0,72,1208	0/0:38,0:38:99:0,102,1725	0/0:23,0:23:66.21:0,66,1131	0/0:40,0:40:99:0,111,1877	0/0:28,0:28:53.47:0,53,1070	0/0:20,0:19:51.13:0,51,795	0/0:30,0:30:81.23:0,81,1329	0/0:56,0:56:99:0,141,2377	0/0:25,0:25:69.24:0,69,1207	0/0:16,0:16:45.15:0,45,795	0/0:32,0:32:78.27:0,78,1378	0/0:17,0:17:48.15:0,48,820	1/1:4,16:20:51.18:1288,51,0	0/0:29,0:29:72.25:0,72,1232	1/1:0,14:14:42.14:1075,42,0
chr10	36920718	.	C	CTG	11695.40	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-15.978;DP=774;FS=0.292;HRun=0;HaplotypeScore=85.6742;InbreedingCoeff=0.9989;MQ=84.77;MQ0=1;MQRankSum=-2.651;QD=42.07;ReadPosRankSum=0.234;VQSLOD=6.3232;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:57:99:0,160,2063	1/1:4,10:14:33.11:557,33,0	0/0:27,0:27:57.16:0,57,724	0/0:22,0:22:51.11:0,51,622	0/0:18,0:18:48.16:0,48,624	0/0:20,0:19:57.19:0,57,741	0/0:31,0:31:84.25:0,84,1062	1/1:6,32:39:99:1681,102,0	0/0:31,0:31:87.26:0,87,1115	0/0:26,0:26:72.22:0,72,922	0/0:10,0:10:30.10:0,30,386	0/0:39,0:39:99:0,114,1483	1/1:4,31:36:84.09:1406,84,0	1/1:3,30:35:84.29:1428,84,0	0/0:42,0:42:99:0,111,1443	0/0:27,0:27:78.25:0,78,1012	0/0:32,0:32:81.26:0,81,1053	0/0:32,0:32:78.22:0,78,996	1/1:4,19:23:21.24:906,21,0	1/1:5,22:28:66.23:1115,66,0	1/1:6,55:61:99:2745,163,0	1/1:2,12:14:33.11:561,33,0	0/0:17,0:17:36.12:0,36,468	0/0:29,0:29:78.25:0,78,1015	1/1:0,15:15:42.14:714,42,0	0/0:25,0:25:66.21:0,66,858	1/1:3,9:12:36.10:582,36,0	0/0:11,0:11:24.08:0,24,312
chr10	36921179	.	CG	C	4354.44	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=13.555;DP=712;FS=3.384;HRun=1;HaplotypeScore=91.6821;InbreedingCoeff=0.9983;MQ=82.74;MQ0=0;MQRankSum=-1.085;QD=38.20;ReadPosRankSum=3.757;VQSLOD=5.3928;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,132,2082	0/0:15,0:15:45.15:0,45,710	0/0:19,1:20:19.46:0,19,771	0/0:19,0:19:54.18:0,54,828	1/1:1,19:20:53.96:748,54,0	0/0:15,0:15:45.15:0,45,703	0/0:22,0:22:66.23:0,66,1053	0/0:28,0:28:78.26:0,78,1230	1/1:0,27:27:72.24:1005,72,0	0/0:14,0:14:39.13:0,39,623	0/0:17,0:17:51.16:0,51,791	0/0:20,0:20:57.19:0,57,901	0/0:29,0:29:87.28:0,87,1358	0/0:34,0:34:99:0,102,1604	0/0:29,0:28:81.25:0,81,1269	1/1:0,17:17:48.16:671,48,0	1/1:0,50:50:99:1930,138,0	0/0:27,0:27:81.28:0,81,1294	0/0:17,0:17:51.17:0,51,794	0/0:17,0:17:51.17:0,51,814	0/0:63,0:63:99:0,190,2970	0/0:33,0:33:99:0,99,1579	0/0:14,0:14:42.13:0,42,648	0/0:34,0:34:99:0,102,1600	0/0:32,0:32:96.33:0,96,1533	0/0:26,0:26:75.26:0,75,1198	0/0:11,0:11:33.11:0,33,527	0/0:17,0:17:48.16:0,48,765
chr10	36923805	.	AGAGTAGTGCTCTCGCG	A	122.96	PASS	AC=2;AF=0.50;AN=4;BaseQRankSum=1.159;DP=29;FS=2.808;HRun=0;HaplotypeScore=59.2933;MQ=96.65;MQ0=16;MQRankSum=-1.159;QD=24.59;ReadPosRankSum=1.159;VQSLOD=1.5736;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:9,0:4:11.70:0,12,177	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	1/1:0,5:5:15.01:193,15,0	./.	./.
chr10	36924912	.	TAC	T	1763.98	PASS	AB=0.898;AC=20;AF=0.385;AN=52;BaseQRankSum=3.590;DP=787;FS=8.315;HRun=0;HaplotypeScore=106.9414;InbreedingCoeff=0.2193;MQ=53.18;MQ0=27;MQRankSum=1.324;QD=4.25;ReadPosRankSum=-0.942;VQSLOD=1.7892;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:34,14:48:34.47:348,34,0	0/0:7,0:9:9.02:0,9,116	./.	./.	0/0:18,0:18:18:0,18,204	1/1:17,7:26:14.46:123,14,0	1/1:19,9:27:23.61:263,24,0	0/0:24,0:23:12.04:0,12,169	0/1:16,1:17:2.87:3,0,330	1/1:19,10:31:37.84:362,38,0	0/1:12,7:20:30.35:98,0,30	0/1:23,1:23:58.53:59,0,102	0/1:11,1:22:11.93:12,0,154	0/0:12,0:22:14.98:0,15,125	1/1:15,12:28:36.40:377,36,0	0/0:24,1:24:33.09:0,33,472	0/1:32,2:34:27.18:27,0,421	0/1:16,7:25:0.93:169,0,1	0/0:17,0:17:27.06:0,27,320	0/0:13,0:22:5.97:0,6,51	0/0:42,0:59:21:0,21,215	0/1:17,1:23:14.95:15,0,110	0/1:18,1:19:14.90:15,0,183	0/1:39,2:41:32.61:33,0,770	0/0:11,0:23:18:0,18,171	0/1:23,3:26:38.87:39,0,228	0/0:9,0:17:17.99:0,18,172	0/0:5,0:5:9.03:0,9,132
chr10	36927243	.	TCTACCTC	T	662.79	PASS	AB=0.889;AC=20;AF=0.385;AN=52;BaseQRankSum=1.697;DP=143;FS=0.000;HRun=0;HaplotypeScore=72.1029;InbreedingCoeff=-0.1237;MQ=66.53;MQ0=2;MQRankSum=-2.900;QD=7.28;ReadPosRankSum=-0.029;VQSLOD=1.1449;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:4,0:4:10.99:11,0,45	1/1:1,0:1:0.47:1,0,0	0/1:11,0:3:2.33:2,0,60	0/0:12,0:7:12.01:0,12,116	0/0:5,0:5:9.03:0,9,188	0/1:4,2:6:31.30:103,0,31	0/1:6,1:7:7.98:23,0,8	0/1:10,0:10:2:2,0,145	0/0:4,0:4:9.03:0,9,202	0/1:2,2:3:7.77:106,0,8	0/0:1,1:2:4.56:0,5,39	0/1:7,0:7:16.19:16,0,144	1/1:2,2:4:3.48:60,3,0	0/1:4,0:4:13.97:14,0,17	0/1:7,0:7:62.40:62,0,76	./.	0/0:3,0:2:3.01:0,3,33	1/1:1,1:2:4.26:65,4,0	0/1:7,1:8:44.72:45,0,170	0/1:5,2:7:33.76:133,0,34	0/0:7,1:8:5.66:0,6,57	0/1:3,2:5:35.22:38,0,35	0/0:2,0:2:3.01:0,3,88	0/0:1,0:1:3.01:0,3,79	1/1:1,3:4:9.03:127,9,0	0/0:5,0:5:11.97:0,12,168	./.	0/0:6,0:6:9:0,9,225
chr10	36927252	.	TCCCTACTC	T	767.89	PASS	AB=0.958;AC=13;AF=0.250;AN=52;BaseQRankSum=2.878;DP=134;FS=1.435;HRun=0;HaplotypeScore=68.5202;InbreedingCoeff=-0.1027;MQ=79.55;MQ0=2;MQRankSum=-2.664;QD=13.24;ReadPosRankSum=1.959;VQSLOD=1.5621;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:4:6.01:0,6,61	./.	0/0:11,0:5:2.92:0,3,117	0/0:20,0:11:10.31:0,10,221	0/0:3,0:3:9.03:0,9,229	0/1:4,0:4:36.54:94,0,37	0/0:6,0:6:4.52:0,5,24	0/1:11,0:11:35.44:35,0,139	0/0:4,0:4:9.03:0,9,229	0/1:5,0:4:10.87:147,0,11	0/0:1,1:2:4.56:0,5,40	0/0:4,0:4:12:0,12,293	0/1:3,0:3:9.90:68,0,10	0/0:2,0:2:2.96:0,3,19	0/1:5,1:6:49.99:50,0,109	0/0:2,0:2:2.97:0,3,20	0/0:3,0:2:6.02:0,6,72	1/1:1,0:1:3.01:53,3,0	0/1:7,0:7:77.54:78,0,157	0/1:6,1:7:8.95:188,0,9	0/1:7,1:8:8.17:8,0,80	0/1:3,0:3:36.33:43,0,36	0/0:2,0:2:3.01:0,3,109	0/0:1,0:1:3.01:0,3,95	1/1:3,0:3:9.03:144,9,0	0/0:4,0:4:12.02:0,12,208	./.	0/0:7,0:7:9.03:0,9,274
chr10	36927256	.	TACTCCTCCC	T	1300.30	PASS	AB=0.857;AC=27;AF=0.540;AN=50;BaseQRankSum=1.722;DP=113;FS=12.499;HRun=0;HaplotypeScore=56.6517;InbreedingCoeff=0.4704;MQ=73.73;MQ0=3;MQRankSum=-4.156;QD=23.64;ReadPosRankSum=-0.458;VQSLOD=0.8303;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,0:3:2.39:18,2,0	./.	0/0:10,0:4:9.43:0,9,85	0/0:19,0:10:7.14:0,7,257	0/0:3,0:3:8.90:0,9,190	1/1:1,2:3:5.14:151,5,0	1/1:2,1:3:5.95:53,6,0	1/1:3,3:6:4.63:103,5,0	0/0:3,0:3:6.02:0,6,175	1/1:3,2:4:9.92:201,10,0	1/1:1,1:2:5.86:35,6,0	0/0:4,0:4:9.03:0,9,265	1/1:1,2:3:6.02:112,6,0	0/0:1,0:1:0.47:0,0,1	1/1:4,0:4:8.93:95,9,0	./.	0/0:2,0:1:3.01:0,3,69	1/1:0,1:1:3.01:81,3,0	0/1:5,1:6:50.34:119,0,50	1/1:4,2:6:1.23:190,1,0	1/1:5,1:6:9.46:89,9,0	1/1:1,2:3:0.14:59,0,0	0/0:2,0:2:3.01:0,3,117	0/0:1,0:1:3.01:0,3,55	1/1:1,3:4:9.03:153,9,0	0/0:3,0:3:5.58:0,6,129	./.	0/0:5,0:5:6.02:0,6,233
chr10	36927265	.	C	CT	421.41	PASS	AB=0.876;AC=21;AF=0.438;AN=48;BaseQRankSum=1.066;DP=137;FS=4.615;HRun=0;HaplotypeScore=47.0210;InbreedingCoeff=0.2733;MQ=77.42;MQ0=9;MQRankSum=-3.289;QD=5.02;ReadPosRankSum=1.529;VQSLOD=2.3986;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:2,1:3:3.01:0,3,34	./.	0/0:21,0:8:9.27:0,9,77	0/1:27,0:10:4.27:4,0,165	0/0:3,0:3:8.90:0,9,99	0/1:3,0:3:11.01:12,0,11	0/1:3,2:5:3.59:45,0,4	1/1:3,2:6:11.94:99,12,0	0/0:3,0:3:5.99:0,6,63	0/1:4,1:5:17.61:91,0,18	0/1:1,1:2:0:0,0,0	0/0:3,0:3:9.03:0,9,125	1/1:3,0:3:5.17:43,5,0	./.	1/1:0,3:2:5.93:41,6,0	./.	0/0:3,0:1:3.01:0,3,42	1/1:1,0:1:2.96:19,3,0	0/1:5,0:4:3.82:4,0,61	1/1:5,2:6:12.89:66,13,0	1/1:3,3:7:9.01:91,9,0	0/1:4,0:4:24.87:32,0,25	0/0:2,0:2:3.01:0,3,42	0/0:1,0:1:3.01:0,3,40	1/1:4,1:5:4.53:24,5,0	0/0:3,0:3:9.03:0,9,116	./.	0/0:7,0:7:10.22:0,10,106
chr10	36927328	.	TATCCACCTTCTCATC	T	313.17	PASS	AB=0.860;AC=15;AF=0.375;AN=40;BaseQRankSum=-0.645;DP=93;FS=38.469;HRun=0;HaplotypeScore=63.9701;InbreedingCoeff=0.2936;MQ=71.92;MQ0=1;MQRankSum=-2.463;QD=7.28;ReadPosRankSum=-0.088;VQSLOD=-0.4692;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:14:11.17:0,11,1170	./.	0/0:12,0:6:12.46:0,12,159	0/1:14,0:6:7.46:7,0,131	./.	./.	0/0:3,0:3:9.03:0,9,212	1/1:4,0:3:9.01:85,9,0	0/0:2,0:2:6.02:0,6,174	0/0:4,0:4:5.48:0,5,167	0/0:2,0:2:6.02:0,6,219	./.	./.	./.	0/0:2,0:1:3.01:0,3,83	0/0:1,0:1:3.01:0,3,35	0/0:2,0:2:6.02:0,6,142	0/0:1,0:1:3.01:0,3,57	./.	1/1:1,0:1:3.01:38,3,0	0/1:7,0:8:39.49:39,0,49	1/1:1,0:1:3.01:31,3,0	1/1:2,0:2:0.47:1,0,0	0/1:4,0:6:57.89:58,0,290	1/1:0,4:4:6.02:164,6,0	0/0:7,0:7:21.07:0,21,607	1/1:1,0:1:2.94:18,3,0	./.
chr10	36927338	.	CTCA	C	150.15	PASS	AB=0.889;AC=12;AF=0.300;AN=40;BaseQRankSum=0.482;DP=105;FS=36.734;HRun=0;HaplotypeScore=44.0206;InbreedingCoeff=0.3628;MQ=81.34;MQ0=6;MQRankSum=-3.179;QD=6.01;ReadPosRankSum=-2.135;VQSLOD=0.1075;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:15,1:16:7.86:0,8,394	./.	0/0:13,0:6:9.65:0,10,72	0/0:13,0:6:8.05:0,8,83	./.	./.	0/0:4,0:3:9.01:0,9,97	1/1:2,0:2:6:54,6,0	0/0:2,0:2:6.02:0,6,90	0/0:6,0:6:9.54:0,10,139	0/0:3,0:3:9.03:0,9,110	./.	./.	./.	0/0:4,0:1:3.01:0,3,36	0/1:3,0:3:11.94:12,0,55	0/0:4,0:4:5.44:0,5,58	0/0:2,0:2:1.22:0,1,20	./.	0/0:1,0:1:0.89:0,1,2	1/1:6,1:7:4.45:31,4,0	1/1:1,0:1:3:25,3,0	0/0:3,0:3:5.63:0,6,72	0/1:5,2:7:98.79:99,0,114	1/1:4,0:4:5.91:38,6,0	0/0:7,0:7:21.02:0,21,243	1/1:1,0:1:2.94:18,3,0	./.
chr10	36927368	.	C	CT	251.46	PASS	AB=0.919;AC=11;AF=0.239;AN=46;BaseQRankSum=4.838;DP=156;FS=36.230;HRun=0;HaplotypeScore=39.0824;InbreedingCoeff=0.1671;MQ=63.61;MQ0=16;MQRankSum=-3.786;QD=4.74;ReadPosRankSum=2.305;VQSLOD=1.0495;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:12,1:13:3.82:4,0,369	0/0:1,0:1:3.01:0,3,40	0/0:24,0:4:9:0,9,106	0/0:32,0:9:9.45:0,9,144	0/0:1,0:1:3.01:0,3,42	0/0:2,0:2:6.02:0,6,83	0/1:7,0:6:10.43:20,0,10	1/1:1,0:1:2.50:9,2,0	0/1:2,0:2:0:0,0,0	0/0:3,0:3:9.03:0,9,125	0/0:5,0:5:12.03:0,12,153	./.	./.	./.	0/0:2,0:1:3:0,3,26	1/1:4,0:2:3.01:41,3,0	0/0:5,0:5:7.47:0,7,96	0/0:5,0:4:12.04:0,12,167	0/0:3,1:3:6.02:0,6,84	./.	1/1:10,1:10:13.38:138,13,0	0/0:4,0:3:0.20:0,0,38	0/0:3,0:3:6.02:0,6,84	0/1:5,5:10:67.72:153,0,68	0/0:5,0:5:4.26:0,4,45	0/1:5,0:5:7.24:7,0,98	./.	0/0:2,0:1:3.01:0,3,42
chr10	36927500	.	CTT	C	104.64	PASS	AB=1.000;AC=11;AF=0.239;AN=46;BaseQRankSum=6.268;DP=304;FS=0.970;HRun=3;HaplotypeScore=53.1663;InbreedingCoeff=0.6174;MQ=66.00;MQ0=21;MQRankSum=-2.593;QD=4.98;ReadPosRankSum=-0.018;VQSLOD=-0.7365;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:69.12:0,69,1356	./.	0/0:62,0:17:14.98:0,15,413	0/0:62,0:9:9.16:0,9,136	0/0:5,0:5:12.04:0,12,220	0/0:5,0:5:12.04:0,12,231	0/0:14,0:14:36.12:0,36,673	1/1:0,1:1:3.01:46,3,0	0/0:7,0:7:21.07:0,21,403	0/0:10,0:12:27.06:0,27,443	0/0:4,0:4:9.02:0,9,138	0/0:4,0:4:9.03:0,9,170	./.	1/1:2,0:2:5.97:44,6,0	0/0:5,0:5:15.05:0,15,289	0/0:15,0:10:24.08:0,24,442	0/0:22,0:22:16.41:0,16,757	0/0:9,0:9:12.53:0,13,314	./.	./.	1/1:4,3:6:5.81:68,6,0	1/1:4,0:4:5.03:29,5,0	0/0:3,0:3:9.03:0,9,163	0/0:11,0:11:1.03:0,1,208	1/1:0,1:1:3.01:46,3,0	0/1:6,0:5:1.95:2,0,91	./.	0/0:6,0:6:18.05:0,18,314
chr10	36927755	.	CCCT	C	1811.94	PASS	AB=0.618;AC=18;AF=0.321;AN=56;BaseQRankSum=4.256;DP=304;FS=31.209;HRun=0;HaplotypeScore=48.7678;InbreedingCoeff=0.7196;MQ=48.59;MQ0=12;MQRankSum=-2.910;QD=19.48;ReadPosRankSum=2.877;VQSLOD=1.5424;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:14:36.07:0,36,677	1/1:1,2:3:9.03:138,9,0	0/0:18,0:5:15.05:0,15,284	0/0:29,0:13:36.37:0,36,574	0/0:10,0:10:21.07:0,21,432	0/0:12,0:11:30.10:0,30,614	0/0:16,0:16:42.09:0,42,821	1/1:6,1:6:6.73:94,7,0	0/0:12,0:9:23.91:0,24,418	0/0:11,0:11:32.94:0,33,650	0/0:7,0:7:18.06:0,18,356	0/0:11,0:10:24.08:0,24,438	1/1:3,5:8:11.45:224,11,0	0/1:2,4:6:6.12:168,0,6	0/0:9,0:7:18.06:0,18,363	0/0:8,0:7:18.06:0,18,371	0/0:15,0:15:39.06:0,39,700	0/0:8,0:7:21.07:0,21,445	0/1:3,4:7:48.97:169,0,49	1/1:4,3:7:5.28:172,5,0	1/1:9,12:18:9.03:137,9,0	1/1:2,10:12:5.04:302,5,0	0/0:2,0:2:6.02:0,6,128	0/0:17,0:17:36.12:0,36,683	1/1:2,11:13:24.08:368,24,0	0/0:7,0:8:21.07:0,21,383	1/1:3,5:8:15.05:230,15,0	0/0:1,0:1:3.01:0,3,64
chr10	36935506	.	G	GC	5292.47	PASS	AB=0.644;AC=42;AF=0.750;AN=56;BaseQRankSum=-4.492;DP=510;FS=15.855;HRun=9;HaplotypeScore=65.9634;InbreedingCoeff=0.7612;MQ=91.30;MQ0=0;MQRankSum=-1.932;QD=14.46;ReadPosRankSum=0.187;VQSLOD=3.2245;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,32:42:69.18:757,69,0	1/1:5,0:5:4.59:15,5,0	0/0:24,0:24:44.74:0,45,368	0/0:22,0:23:32.50:0,32,259	0/0:16,0:16:44.97:0,45,387	1/1:4,12:16:4.03:273,4,0	1/1:3,25:29:63.16:697,63,0	1/1:5,0:10:8.81:59,9,0	0/0:31,0:31:80.98:0,81,703	1/1:7,16:23:48.13:531,48,0	1/1:2,8:10:21.06:232,21,0	1/1:5,25:30:34.09:597,34,0	1/1:4,0:18:9.03:45,9,0	1/1:6,1:18:8.50:43,8,0	1/1:5,19:23:13.05:372,13,0	0/0:17,0:16:47.97:0,48,412	0/0:33,0:33:86.95:0,87,755	1/1:0,12:13:35.93:379,36,0	1/1:9,0:16:13.13:84,13,0	1/1:4,0:9:9.28:55,9,0	1/1:4,0:9:8.56:42,9,0	0/1:7,0:11:0:0,0,0	1/1:3,14:17:13.09:372,13,0	0/1:5,20:25:0.97:447,0,1	1/1:8,0:8:5.34:23,5,0	1/1:5,1:17:25.31:156,25,0	1/1:4,0:12:15.73:90,16,0	1/1:4,0:4:4.79:25,5,0
chr10	36936325	.	A	AAACAACAAC	13715.18	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-8.408;DP=700;FS=5.176;HRun=0;HaplotypeScore=194.2930;InbreedingCoeff=0.9786;MQ=66.94;MQ0=1;MQRankSum=-13.292;QD=54.00;ReadPosRankSum=-6.798;VQSLOD=2.5437;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:36:55.72:0,56,1461	1/1:6,11:17:30.10:1364,30,0	0/0:33,0:28:21.07:0,21,482	0/0:21,0:20:21.04:0,21,417	0/0:17,0:17:18.06:0,18,487	0/0:30,0:29:60.21:0,60,1655	0/0:12,0:12:21.07:0,21,580	1/1:40,0:40:50.38:1674,50,0	0/0:30,0:30:51.14:0,51,1279	0/0:24,0:24:51.17:0,51,1322	0/0:19,0:19:33.11:0,33,911	0/0:8,0:22:11.21:0,11,23	1/1:11,4:16:24.08:963,24,0	1/1:18,9:29:30.10:1148,30,0	0/0:33,0:33:69.24:0,69,1786	0/0:29,0:29:75.26:0,75,2070	0/0:30,0:30:48.15:0,48,1230	0/0:19,0:19:39.03:0,39,1010	1/1:12,5:18:27.09:998,27,0	1/1:13,12:26:48.16:2005,48,0	1/1:12,1:14:9.03:314,9,0	1/1:21,12:36:47.08:1611,47,0	0/0:10,0:28:20.09:0,20,119	0/0:10,0:26:14.59:0,15,30	1/1:11,13:24:39.13:1711,39,0	0/0:24,0:25:66.21:0,66,1689	1/1:20,12:34:45.15:1926,45,0	0/0:11,0:11:24.08:0,24,663
chr10	36942501	.	ATG	A	971.14	PASS	AB=0.899;AC=26;AF=0.520;AN=50;BaseQRankSum=-0.085;DP=611;FS=0.897;HRun=0;HaplotypeScore=98.6265;InbreedingCoeff=0.0502;MQ=56.03;MQ0=10;MQRankSum=2.458;QD=2.54;ReadPosRankSum=2.264;VQSLOD=1.6775;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:25:11.50:0,12,105	1/1:11,0:12:2.84:14,3,0	0/0:36,0:11:0:0,0,0	./.	0/1:17,0:17:15.25:15,0,53	0/0:16,1:17:11.98:0,12,117	0/0:19,0:19:11.99:0,12,122	0/0:34,0:33:3.43:0,3,9	./.	0/1:26,1:26:20.05:20,0,89	0/1:14,0:15:5.12:5,0,38	1/1:20,2:22:3.01:32,3,0	1/1:10,3:14:5.75:63,6,0	1/1:15,3:18:3.01:32,3,0	0/0:17,0:17:5.98:0,6,71	0/1:16,2:20:11.27:48,0,11	1/1:21,13:34:29.74:285,30,0	0/1:27,1:27:27.36:27,0,135	0/1:23,0:24:19.27:19,0,28	1/1:5,1:7:5.85:46,6,0	0/1:41,6:44:26.54:27,0,31	0/1:10,4:14:26.96:55,0,27	./.	0/1:30,7:38:0.13:201,0,0	1/1:9,2:14:11.69:92,12,0	0/0:24,0:24:10.66:0,11,54	1/1:11,3:14:9.02:96,9,0	0/1:12,2:14:46.28:46,0,58
chr10	36942549	.	G	GCA	2747.90	PASS	AB=0.965;AC=21;AF=0.375;AN=56;BaseQRankSum=0.075;DP=514;FS=164.059;HRun=0;HaplotypeScore=96.8960;InbreedingCoeff=0.0747;MQ=69.86;MQ0=13;MQRankSum=0.468;QD=9.51;ReadPosRankSum=-1.043;VQSLOD=0.4818;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:29:48.23:56,0,48	0/0:6,0:6:9.16:0,9,34	0/0:29,0:19:56.90:0,57,801	0/0:32,0:21:43.58:0,44,704	0/0:13,0:13:14.91:0,15,495	0/1:15,0:15:53.16:65,0,53	0/1:17,0:17:24.66:25,0,87	0/1:24,0:24:5.55:6,0,56	0/0:15,0:15:30.09:0,30,436	0/1:18,0:18:31.49:31,0,90	0/1:8,0:8:18.82:23,0,19	1/1:9,0:9:21.07:312,21,0	0/1:13,0:13:7.55:8,0,28	0/1:19,0:19:19.14:37,0,19	0/0:11,0:11:2.18:0,2,69	0/0:16,0:16:30.06:0,30,386	0/0:33,0:33:68.21:0,68,812	0/1:20,0:19:47.54:142,0,48	0/0:17,0:16:19.52:0,20,123	0/0:15,0:14:13.60:0,14,83	0/0:38,0:36:12.77:0,13,95	0/1:17,0:17:2.06:2,0,63	0/1:2,9:10:0:0,0,0	1/1:35,1:36:58.90:1218,59,0	0/1:21,0:21:9.58:10,0,46	1/1:2,12:15:41.99:651,42,0	0/1:11,0:10:26.24:31,0,26	1/1:2,4:6:18.06:307,18,0
chr10	36942817	.	A	AT	2804.19	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-11.344;DP=615;FS=4.484;HRun=9;HaplotypeScore=59.7100;InbreedingCoeff=0.9979;MQ=71.38;MQ0=0;MQRankSum=0.834;QD=26.45;ReadPosRankSum=0.445;VQSLOD=4.2604;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:51,1:52:99:0,138,1198	0/0:13,0:13:32.99:0,33,286	0/0:13,0:13:26:0,26,208	0/0:13,0:14:33.77:0,34,275	0/0:20,0:20:50.95:0,51,439	0/0:31,0:32:80:0,80,683	0/0:20,0:20:56.97:0,57,491	0/0:16,0:16:32.97:0,33,287	0/0:24,0:24:68.97:0,69,599	0/0:24,0:24:59.97:0,60,517	0/0:12,0:12:26.99:0,27,234	1/1:2,19:21:54.14:593,54,0	0/0:19,0:19:47.98:0,48,417	0/0:25,0:25:68.96:0,69,595	0/0:23,0:23:62.98:0,63,547	0/0:20,0:20:44.97:0,45,391	0/0:40,0:40:99:0,111,963	0/0:20,0:21:56.02:0,56,475	0/0:21,0:21:50.95:0,51,440	0/0:16,0:16:38.96:0,39,335	0/0:30,0:30:77.96:0,78,673	0/0:24,0:24:59.96:0,60,517	1/1:4,16:20:25.08:505,25,0	1/1:1,33:34:96.26:1062,96,0	0/0:15,0:15:38.98:0,39,338	1/1:3,18:21:54.13:587,54,0	0/0:15,0:15:32.98:0,33,286	1/1:2,8:10:21.06:232,21,0
chr10	36944354	.	TTCTCTCTCTC	T	1602.88	PASS	AB=0.807;AC=15;AF=0.268;AN=56;BaseQRankSum=0.319;DP=752;FS=4.729;HRun=0;HaplotypeScore=206.7868;InbreedingCoeff=0.4544;MQ=73.10;MQ0=25;MQRankSum=-3.406;QD=7.63;ReadPosRankSum=-1.079;VQSLOD=2.2098;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:36:37.76:0,38,789	1/1:5,7:13:20.42:478,20,0	0/0:73,0:32:1.25:0,1,19	0/0:91,0:34:1.36:0,1,3	0/0:20,0:20:11.94:0,12,93	0/0:15,0:16:18.03:0,18,529	0/0:27,0:26:28.34:0,28,453	1/1:35,0:34:9.27:85,9,0	0/0:26,0:34:45.55:0,46,1342	0/0:26,0:29:26.41:0,26,907	0/0:16,0:21:21:0,21,346	0/0:11,0:17:27.05:0,27,820	0/1:14,1:16:12.29:191,0,12	1/1:17,0:16:20.22:228,20,0	0/0:28,0:29:33.05:0,33,909	0/0:13,0:18:21.04:0,21,608	0/0:19,0:18:30.04:0,30,723	0/0:11,0:18:21.01:0,21,696	1/1:15,0:15:3:28,3,0	0/1:12,11:23:29.52:187,0,30	0/1:16,0:14:8.04:8,0,12	1/1:13,13:27:7.09:405,7,0	0/0:17,0:17:8.99:0,9,77	0/0:11,0:25:27.06:0,27,939	0/1:10,4:15:52.24:80,0,52	0/0:22,0:22:37.90:0,38,809	0/1:20,13:33:7.99:83,0,8	0/0:25,0:25:17.99:0,18,472
chr10	36944394	.	C	CTG	450.79	PASS	AB=0.813;AC=4;AF=0.071;AN=56;BaseQRankSum=2.134;DP=648;FS=14.526;HRun=0;HaplotypeScore=107.2306;InbreedingCoeff=-0.0877;MQ=56.33;MQ0=34;MQRankSum=3.974;QD=4.55;ReadPosRankSum=4.129;VQSLOD=1.6151;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:32:57.93:0,58,449	0/0:13,0:13:32.69:0,33,241	0/0:30,0:9:4.46:0,4,85	0/0:46,0:8:14.66:0,15,100	0/0:19,0:20:35.68:0,36,284	0/0:17,0:17:26.19:0,26,213	0/0:31,0:29:47.50:0,47,424	0/0:25,0:24:63.03:0,63,526	0/1:28,0:28:39.37:39,0,387	0/0:24,0:24:15.68:0,16,492	0/0:20,0:20:22.60:0,23,303	0/1:26,0:26:11.23:11,0,415	0/0:7,0:7:17.94:0,18,157	0/0:14,0:13:29.62:0,30,300	0/0:22,0:22:62.44:0,62,614	0/0:20,0:20:22.24:0,22,303	0/0:23,0:23:53.64:0,54,465	0/0:21,0:20:5.82:0,6,228	0/0:20,0:19:47.79:0,48,402	0/0:29,0:29:53.88:0,54,439	0/0:22,0:19:47.96:0,48,420	0/0:28,0:28:50.86:0,51,425	0/0:12,0:12:21.83:0,22,171	0/0:33,0:33:12.85:0,13,348	0/0:10,0:10:17.88:0,18,135	0/1:8,18:27:24.79:488,0,25	0/0:28,0:27:14.10:0,14,241	0/1:9,0:17:18.38:18,0,65
chr10	36945906	.	CCACA	C	5871.33	PASS	AB=1.000;AC=39;AF=0.722;AN=54;BaseQRankSum=9.210;DP=584;FS=0.863;HRun=0;HaplotypeScore=145.5271;InbreedingCoeff=0.7235;MQ=63.91;MQ0=6;MQRankSum=-2.200;QD=14.36;ReadPosRankSum=1.665;VQSLOD=4.1498;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:39,0:38:40.92:327,41,0	1/1:12,0:12:11.30:63,11,0	0/0:23,0:15:20.14:0,20,674	0/0:34,0:29:33.02:0,33,1295	0/0:10,0:11:29.89:0,30,681	1/1:17,0:17:27.94:234,28,0	1/1:28,0:28:54.89:309,55,0	1/1:17,0:17:6:92,6,0	0/0:29,0:29:75.26:0,75,1851	1/1:26,0:26:19.41:345,19,0	1/1:5,0:5:4.87:19,5,0	1/1:6,29:34:75.16:1216,75,0	1/1:15,0:14:2.53:13,3,0	1/1:13,0:13:2.66:17,3,0	1/1:16,0:16:34.08:202,34,0	0/0:27,0:28:74.99:0,75,1775	0/0:29,0:29:72.25:0,72,1739	1/1:23,0:23:51.91:318,52,0	1/1:9,0:9:7.27:58,7,0	./.	0/1:48,0:48:3.92:72,0,4	0/0:14,0:14:0:0,0,0	1/1:2,7:9:8.97:153,9,0	1/1:9,27:36:63.02:1062,63,0	1/1:8,0:8:5.82:32,6,0	1/1:6,23:29:72.22:1150,72,0	1/1:17,0:16:30.09:138,30,0	1/1:6,1:7:3.01:51,3,0
chr10	36945907	.	CA	C	3735.74	PASS	AB=1.000;AC=38;AF=0.679;AN=56;BaseQRankSum=12.717;DP=579;FS=3.835;HRun=1;HaplotypeScore=121.6496;InbreedingCoeff=0.6084;MQ=64.21;MQ0=6;MQRankSum=-1.614;QD=9.00;ReadPosRankSum=1.377;VQSLOD=1.4334;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,23:37:45.06:471,45,0	1/1:9,2:12:27.11:204,27,0	0/0:24,0:16:35.26:0,35,461	0/0:34,0:29:54.69:0,55,889	0/0:11,0:11:24.87:0,25,392	1/1:6,11:18:36.96:298,37,0	1/1:8,21:29:51.46:446,51,0	1/1:15,1:17:6.71:99,7,0	0/0:31,0:31:93.23:0,93,1209	1/1:8,11:25:16.89:283,17,0	1/1:0,5:5:5.98:61,6,0	0/1:34,0:33:22.22:22,0,82	1/1:9,5:13:14.49:95,14,0	1/1:11,0:12:12.45:87,12,0	1/1:3,12:15:32.02:251,32,0	0/0:28,0:28:75.86:0,76,1086	0/0:29,0:29:84.19:0,84,1102	1/1:6,18:24:38.02:375,38,0	1/1:5,3:8:5.53:93,6,0	1/1:4,2:6:0.73:22,1,0	1/1:38,8:48:38.59:434,39,0	1/1:8,2:12:9.42:79,9,0	0/1:9,0:9:1.48:1,0,23	0/1:36,0:36:22.33:22,0,179	1/1:6,1:8:11.68:113,12,0	0/1:28,0:28:62.17:62,0,86	1/1:5,12:16:19.65:216,20,0	0/0:7,0:7:10.41:0,10,113
chr10	36945909	.	CA	C	3438.36	PASS	AB=0.833;AC=34;AF=0.607;AN=56;BaseQRankSum=12.442;DP=569;FS=0.715;HRun=1;HaplotypeScore=121.0534;InbreedingCoeff=0.3752;MQ=65.12;MQ0=6;MQRankSum=-3.081;QD=8.45;ReadPosRankSum=2.189;VQSLOD=1.0684;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:15,22:36:4.48:395,0,4	1/1:10,2:12:25.02:178,25,0	0/0:24,1:17:8.39:0,8,595	0/0:35,0:30:60.48:0,60,1103	0/0:11,0:11:31.35:0,31,472	1/1:6,11:17:26:259,26,0	1/1:5,20:26:22.47:360,22,0	1/1:14,1:15:2.94:77,3,0	0/0:33,0:33:96.31:0,96,1470	0/1:14,11:25:17.69:289,0,18	1/1:3,2:6:8.98:85,9,0	0/1:34,0:33:54.64:55,0,87	1/1:11,4:14:15.44:95,15,0	1/1:12,0:12:14.09:89,14,0	1/1:2,12:14:23.72:240,24,0	0/0:26,0:26:76.14:0,76,1190	0/0:28,0:28:84.28:0,84,1302	1/1:7,18:25:16.28:352,16,0	1/1:4,3:7:4.07:99,4,0	0/1:4,2:6:2.34:20,0,2	1/1:42,7:49:15.59:386,16,0	1/1:10,2:12:4.95:70,5,0	0/1:9,0:9:0.42:0,0,47	0/1:35,0:35:38.16:38,0,210	1/1:6,1:7:2.49:78,2,0	0/1:28,0:28:93.85:94,0,107	0/1:5,11:15:6.29:179,0,6	0/0:4,0:4:6.79:0,7,94
chr10	36946344	.	CTGTG	C	1828.14	PASS	AB=0.814;AC=24;AF=0.462;AN=52;BaseQRankSum=-2.327;DP=526;FS=1.668;HRun=0;HaplotypeScore=88.3687;InbreedingCoeff=0.2914;MQ=60.81;MQ0=16;MQRankSum=0.509;QD=5.94;ReadPosRankSum=1.512;VQSLOD=1.6573;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:30,2:33:15.04:208,15,0	0/0:5,0:7:5.49:0,5,24	./.	./.	1/1:9,7:16:3.01:46,3,0	1/1:19,6:24:6.02:93,6,0	1/1:13,2:14:2.59:46,3,0	0/0:27,0:26:6.01:0,6,64	1/1:11,6:16:12.04:186,12,0	1/1:9,7:16:18.13:294,18,0	1/1:13,7:20:8.99:113,9,0	0/0:20,1:21:5.49:0,5,24	0/0:6,0:10:6.98:0,7,28	0/0:12,0:17:2.74:0,3,12	1/1:12,3:15:9.03:139,9,0	1/1:8,4:12:9.03:140,9,0	0/1:21,10:30:4.14:212,0,4	0/1:19,9:30:26.86:343,0,27	0/1:15,1:20:29.91:77,0,30	0/1:14,1:14:33.02:35,0,33	0/1:23,0:24:31.72:32,0,83	0/0:5,0:8:5.49:0,5,24	0/0:9,0:11:2.74:0,3,12	0/1:11,1:18:34.32:34,0,62	0/0:15,0:20:8.49:0,8,49	0/0:23,0:31:24.76:0,25,417	0/0:16,0:18:5.28:0,5,24	0/0:13,0:12:9.03:0,9,181
chr10	36949130	.	A	AGATC	1290.77	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=-2.004;DP=553;FS=3.821;HRun=0;HaplotypeScore=100.4263;InbreedingCoeff=0.6757;MQ=66.80;MQ0=13;MQRankSum=0.352;QD=7.09;ReadPosRankSum=0.367;VQSLOD=2.2993;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:34,1:35:6.02:153,6,0	0/0:3,0:3:8.96:0,9,99	0/0:30,0:18:47:0,47,630	0/0:51,0:15:34.01:0,34,452	0/0:17,0:17:33.09:0,33,493	1/1:15,0:15:2.92:28,3,0	1/1:4,19:26:9.74:190,10,0	0/0:29,0:28:78.25:0,78,1205	0/0:19,0:19:40.37:0,40,491	1/1:13,0:13:33.10:468,33,0	0/1:8,0:8:0:0,0,0	0/0:18,0:18:48.15:0,48,705	0/0:19,0:19:15.27:0,15,115	0/0:17,0:17:10.43:0,10,54	1/1:8,18:26:15.04:297,15,0	0/0:16,0:16:14.71:0,15,434	0/1:29,0:29:43.55:44,0,563	1/1:2,11:13:12.04:255,12,0	0/0:26,0:26:63.12:0,63,870	0/0:15,0:15:32.19:0,32,354	0/0:30,0:29:22.55:0,23,242	0/0:10,0:10:23.83:0,24,212	0/0:18,0:18:45.13:0,45,663	0/0:23,0:23:47.78:0,48,701	0/0:7,0:7:8.90:0,9,62	0/1:17,0:17:30.24:30,0,552	0/0:15,0:14:14.75:0,15,152	0/0:8,0:8:12.62:0,13,267
chr10	36949132	.	A	ATCGATC	1216.34	PASS	AB=0.909;AC=15;AF=0.268;AN=56;BaseQRankSum=2.802;DP=585;FS=5.109;HRun=0;HaplotypeScore=127.8821;InbreedingCoeff=0.5487;MQ=64.11;MQ0=13;MQRankSum=-1.500;QD=5.85;ReadPosRankSum=-1.027;VQSLOD=1.8572;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:8,29:38:9.03:197,9,0	0/0:3,0:3:9.02:0,9,106	0/0:29,0:17:47:0,47,630	0/0:50,0:14:32.57:0,33,462	0/0:16,0:16:33:0,33,493	1/1:15,0:15:2.88:15,3,0	1/1:27,0:28:2.89:132,3,0	0/0:30,0:29:43.46:0,43,1167	0/0:12,0:22:42.58:0,43,540	1/1:16,0:16:33.58:469,34,0	0/0:8,0:8:0.89:0,1,2	0/0:16,0:19:48.15:0,48,730	0/0:20,0:20:7.24:0,7,123	0/0:18,0:18:6.31:0,6,115	1/1:30,0:30:14.65:180,15,0	0/0:14,0:18:17.48:0,17,487	0/1:20,0:32:29.32:29,0,587	1/1:16,0:17:6.25:138,6,0	0/0:23,0:23:60.14:0,60,843	0/0:13,0:13:30.86:0,31,366	0/0:32,0:32:21.89:0,22,315	0/0:11,0:11:23.54:0,24,224	0/0:16,0:17:45.08:0,45,664	0/0:15,0:24:47.41:0,47,768	0/0:8,0:8:8.99:0,9,76	0/1:21,0:21:99:173,0,538	0/0:15,0:14:8.24:0,8,160	0/1:11,0:11:53.59:54,0,248
chr10	36949134	.	C	CGA	954.79	PASS	AB=0.963;AC=8;AF=0.148;AN=54;BaseQRankSum=-1.169;DP=600;FS=0.733;HRun=0;HaplotypeScore=105.2062;InbreedingCoeff=0.2183;MQ=63.40;MQ0=14;MQRankSum=0.366;QD=6.32;ReadPosRankSum=1.177;VQSLOD=3.3599;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:37,0:37:12.06:89,0,12	0/0:3,0:3:8.98:0,9,100	0/0:29,0:17:47:0,47,631	0/0:50,0:14:31.30:0,31,438	0/0:17,0:17:36.09:0,36,514	1/1:4,14:19:3:61,3,0	0/1:30,1:31:83.65:158,0,84	0/0:29,0:28:82.77:0,83,1229	0/0:23,0:23:44.02:0,44,514	1/1:6,11:16:2.15:404,2,0	./.	0/0:18,0:18:48.13:0,48,677	0/0:21,0:21:19.45:0,19,155	0/0:20,0:20:9.71:0,10,93	0/1:28,2:30:48.96:204,0,49	0/0:19,0:19:37.13:0,37,495	0/0:32,0:32:3.23:0,3,595	0/1:16,1:17:40.11:165,0,40	0/0:22,0:22:64.88:0,65,880	0/0:14,0:13:36.90:0,37,389	0/0:35,0:34:25.87:0,26,270	0/0:11,0:11:23.93:0,24,221	0/0:17,0:17:45.12:0,45,646	0/0:24,0:24:47.65:0,48,631	0/0:9,0:9:8.94:0,9,66	0/0:23,0:23:61.08:0,61,769	0/0:15,0:14:14.75:0,15,145	0/0:11,0:11:26.98:0,27,344
chr10	36949814	.	GCACA	G	4628.96	PASS	AB=0.667;AC=13;AF=0.232;AN=56;BaseQRankSum=4.163;DP=710;FS=3.626;HRun=0;HaplotypeScore=169.8850;InbreedingCoeff=0.8532;MQ=51.50;MQ0=25;MQRankSum=-2.549;QD=26.45;ReadPosRankSum=-1.035;VQSLOD=4.7269;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:17,22:39:53.15:613,53,0	0/0:4,0:6:11.60:0,12,145	0/0:28,0:12:11.97:0,12,131	0/0:30,0:15:16.47:0,16,188	0/0:23,0:23:48.13:0,48,1041	1/1:7,12:19:35.57:402,36,0	1/1:13,18:31:60.06:960,60,0	0/0:30,0:23:51.16:0,51,1127	0/0:22,0:22:54.18:0,54,1237	1/1:11,27:36:84.28:1443,84,0	1/1:4,4:7:12.04:192,12,0	0/0:26,0:27:44.44:0,44,998	0/0:23,0:23:51.14:0,51,1138	0/0:22,0:22:57.20:0,57,1354	1/1:6,6:12:18.85:284,19,0	0/0:29,0:31:74.82:0,75,1590	0/0:23,1:25:5.05:0,5,1144	0/1:14,14:28:15.42:735,0,15	0/0:27,0:22:35.89:0,36,742	0/0:13,0:12:27.05:0,27,616	0/0:82,0:82:99:0,186,4341	0/0:21,0:21:30:0,30,703	0/0:17,0:20:30.10:0,30,699	0/0:28,0:27:38.68:0,39,895	0/0:16,0:16:30.10:0,30,755	0/0:38,0:37:95.80:0,96,2151	0/0:12,0:12:24.08:0,24,601	0/0:4,0:4:12.04:0,12,300
chr10	36949855	.	GAC	G	8373.14	PASS	AB=0.565;AC=41;AF=0.759;AN=54;BaseQRankSum=3.948;DP=692;FS=3.554;HRun=0;HaplotypeScore=151.4334;InbreedingCoeff=0.7942;MQ=48.98;MQ0=23;MQRankSum=-1.237;QD=15.92;ReadPosRankSum=-1.452;VQSLOD=4.1895;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,19:33:40.75:442,41,0	1/1:5,0:5:2.99:36,3,0	0/0:36,1:8:10.54:0,11,192	0/0:34,0:9:6.90:0,7,83	0/0:18,0:18:42.06:0,42,648	1/1:5,17:23:32.92:389,33,0	1/1:15,15:30:36.11:437,36,0	1/1:13,8:19:17.98:190,18,0	0/0:19,0:19:45.14:0,45,710	1/1:21,20:40:41.44:883,41,0	1/1:4,6:10:11.51:107,12,0	1/1:12,0:23:16.01:78,16,0	1/1:5,13:19:35.94:410,36,0	1/1:5,16:21:51.14:611,51,0	1/1:6,9:15:24.53:281,25,0	0/0:23,0:23:51.17:0,51,827	0/0:28,0:28:66.18:0,66,1043	1/1:10,21:30:29.49:671,29,0	1/1:15,7:17:26.95:307,27,0	0/1:3,10:13:13.77:167,0,14	1/1:49,55:103:99:2359,204,0	1/1:6,15:21:24.07:285,24,0	1/1:7,0:17:0.46:1,0,0	1/1:13,0:16:8.99:43,9,0	1/1:5,14:19:30.09:369,30,0	1/1:16,0:25:34.53:182,35,0	1/1:6,7:14:11.87:125,12,0	./.
chr10	36949871	.	CAG	C	2568.90	PASS	AB=0.990;AC=24;AF=0.444;AN=54;BaseQRankSum=9.621;DP=670;FS=8.279;HRun=0;HaplotypeScore=156.6782;InbreedingCoeff=-0.3370;MQ=48.34;MQ0=21;MQRankSum=2.226;QD=4.86;ReadPosRankSum=8.659;VQSLOD=0.9320;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:27,1:28:70.50:102,0,70	0/1:3,0:3:4.83:5,0,19	0/0:43,0:13:16.26:0,16,295	0/1:30,0:8:1.36:1,0,88	0/0:20,0:20:54.16:0,54,970	0/1:23,0:23:23.50:81,0,23	0/1:26,0:27:75.54:104,0,76	0/1:25,0:21:20.73:21,0,280	0/0:27,0:27:67.86:0,68,1047	0/1:34,3:35:99:382,0,111	0/1:11,0:11:21.10:21,0,30	0/1:19,0:19:3.07:3,0,78	0/1:18,0:18:1.68:150,0,2	1/1:21,1:22:6.40:231,6,0	0/1:13,1:15:24.83:92,0,25	0/0:21,0:21:57.15:0,57,1046	0/0:28,0:28:83.72:0,84,1410	0/1:24,0:24:18.20:280,0,18	0/1:24,0:21:45.41:45,0,192	0/1:15,0:15:46.42:46,0,100	0/1:97,3:99:59.63:910,0,60	0/1:19,0:19:0.46:86,0,0	1/1:16,0:16:2.18:19,2,0	0/1:16,0:16:0.48:0,0,63	0/1:22,0:22:65.99:66,0,96	0/1:23,0:22:41.17:41,0,101	0/1:9,0:9:0.54:30,0,1	./.
chr10	36949872	.	AGG	A	1018.41	PASS	AB=0.952;AC=15;AF=0.278;AN=54;BaseQRankSum=2.598;DP=672;FS=126.425;HRun=2;HaplotypeScore=161.6818;InbreedingCoeff=-0.2477;MQ=48.53;MQ0=20;MQRankSum=-2.036;QD=2.83;ReadPosRankSum=0.737;VQSLOD=-0.7213;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,1:28:6.31:0,6,274	0/0:3,0:3:7.13:0,7,69	0/0:42,2:13:6.04:0,6,337	0/1:26,2:8:6.46:6,0,121	0/0:21,0:21:56.86:0,57,1071	0/0:23,0:23:41:0,41,267	0/0:28,0:28:23.73:0,24,451	0/0:24,1:21:7.80:0,8,695	0/0:27,0:27:57.33:0,57,1263	0/1:34,2:35:99:207,0,455	0/1:11,0:11:2.71:3,0,130	0/1:19,1:20:18.57:19,0,250	0/1:16,2:18:92.51:93,0,106	0/1:21,1:22:99:115,0,193	0/1:15,0:15:11.62:12,0,174	0/0:21,0:21:54.18:0,54,1027	0/0:28,0:28:84.21:0,84,1437	0/1:24,1:24:96.86:97,0,160	0/0:24,0:21:7.60:0,8,568	0/0:16,0:16:9.65:0,10,299	0/1:103,0:100:99:339,0,972	0/1:17,2:19:71.49:71,0,98	1/1:15,0:15:2.35:43,2,0	0/1:16,0:16:32.80:33,0,174	0/0:20,2:22:34.85:0,35,409	0/1:21,2:22:99:126,0,316	0/1:8,1:9:0.51:1,0,44	./.
chr10	36949993	.	T	TAC	5112.82	PASS	AB=0.708;AC=12;AF=0.214;AN=56;BaseQRankSum=-8.252;DP=852;FS=0.811;HRun=0;HaplotypeScore=166.6226;InbreedingCoeff=0.6584;MQ=54.04;MQ0=18;MQRankSum=1.835;QD=24.94;ReadPosRankSum=-0.369;VQSLOD=4.9395;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,25:40:45.46:1157,45,0	0/0:4,0:4:3.01:0,3,36	0/0:38,0:15:14.16:0,14,105	0/0:40,0:13:0.51:0,1,94	0/0:15,0:15:30.09:0,30,353	1/1:5,7:12:17.87:261,18,0	1/1:17,14:31:24.46:747,24,0	0/0:29,0:31:47.79:0,48,503	0/0:24,0:25:33.06:0,33,610	1/1:28,19:48:42.37:1460,42,0	1/1:10,1:11:13.57:156,14,0	0/0:3,0:36:52.34:0,52,249	0/0:27,0:27:57.13:0,57,648	0/0:42,0:42:87.22:0,87,1107	0/1:19,12:31:50.70:592,0,51	0/0:25,0:25:48.11:0,48,545	0/0:31,0:32:69.18:0,69,791	0/1:17,14:31:17.16:739,0,17	0/0:20,0:12:11.94:0,12,111	0/0:20,0:20:36.11:0,36,424	0/0:113,0:110:99:0,208,2423	0/0:33,0:32:62.77:0,63,686	0/0:5,0:11:5.68:0,6,28	0/0:13,0:30:37.08:0,37,175	0/0:30,0:31:32.81:0,33,539	0/0:24,0:51:90.37:0,90,440	0/0:17,0:16:35.88:0,36,376	0/0:2,0:4:2.83:0,3,14
chr10	36950071	.	G	GAC	14696.80	PASS	AB=0.658;AC=31;AF=0.554;AN=56;BaseQRankSum=-12.909;DP=973;FS=0.318;HRun=0;HaplotypeScore=147.0779;InbreedingCoeff=0.6543;MQ=59.52;MQ0=25;MQRankSum=1.279;QD=22.68;ReadPosRankSum=1.045;VQSLOD=5.4919;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,37:47:87.77:1408,88,0	1/1:2,7:9:11.67:164,12,0	0/0:54,0:16:35.31:0,35,408	0/1:46,0:15:3.42:3,0,111	0/0:9,0:10:14.88:0,15,161	1/1:3,16:19:23.80:435,24,0	1/1:11,20:31:36.12:587,36,0	1/1:22,29:49:23.72:1076,24,0	0/0:40,0:41:80.95:0,81,952	1/1:12,26:39:75.18:1122,75,0	0/1:2,13:15:12.93:318,0,13	0/0:41,0:41:63.03:0,63,731	1/1:5,27:32:32.25:1003,32,0	1/1:13,20:32:18.24:564,18,0	0/1:8,25:33:25.37:636,0,25	0/0:26,0:26:66.14:0,66,779	0/0:38,0:38:84.14:0,84,981	1/1:10,26:35:21.89:894,22,0	1/1:8,14:19:42.02:568,42,0	1/1:5,11:16:30.10:489,30,0	1/1:28,126:155:99:4115,225,0	0/1:5,21:26:0.80:502,0,1	0/0:16,0:16:30.09:0,30,369	0/0:42,0:42:87.24:0,87,1050	0/1:7,9:17:46.85:284,0,47	0/0:15,2:47:1.20:0,1,353	1/1:5,14:19:33.11:527,33,0	0/0:2,0:7:17.04:0,17,84
chr10	36950183	.	T	TACAC	5420.55	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-6.014;DP=851;FS=4.633;HRun=0;HaplotypeScore=162.2399;InbreedingCoeff=0.9522;MQ=57.15;MQ0=8;MQRankSum=-0.407;QD=38.44;ReadPosRankSum=-0.703;VQSLOD=4.9494;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:47:99:0,102,1795	0/0:4,0:4:6.49:0,6,104	0/0:34,0:16:22.83:0,23,298	0/0:47,0:29:47.89:0,48,734	0/0:22,0:21:45.61:0,46,745	0/0:17,0:18:42.12:0,42,671	0/0:37,0:37:80.83:0,81,1305	0/0:38,0:38:81.19:0,81,1214	0/0:31,0:31:78.23:0,78,1244	0/0:41,0:40:99:0,102,1647	0/0:14,0:14:11.61:0,12,178	1/1:14,21:36:65.73:1451,66,0	0/0:28,0:28:63.19:0,63,1036	0/0:30,0:31:75.25:0,75,1264	0/0:29,0:29:72.24:0,72,1235	0/0:26,0:26:63.61:0,64,1011	0/0:47,0:46:96.78:0,97,1621	0/0:24,0:24:60.10:0,60,942	0/0:23,0:22:48.10:0,48,714	0/0:13,0:13:27.08:0,27,437	0/0:88,0:89:99:0,172,3035	0/0:24,0:24:42.10:0,42,617	1/1:2,7:14:11.27:238,11,0	1/1:10,32:46:11.30:1395,11,0	0/0:22,0:22:27.74:0,28,602	1/1:18,15:33:78.25:1773,78,0	0/0:20,0:20:51.17:0,51,874	1/1:6,5:11:30.03:563,30,0
chr10	36950457	.	T	TACAC	2059.55	PASS	AB=0.780;AC=38;AF=0.731;AN=52;BaseQRankSum=-0.518;DP=573;FS=2.180;HRun=0;HaplotypeScore=125.0271;InbreedingCoeff=-0.1525;MQ=58.70;MQ0=15;MQRankSum=1.985;QD=4.17;ReadPosRankSum=-0.567;VQSLOD=2.1728;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:34,9:48:14.67:211,15,0	0/1:8,0:11:6.83:7,0,40	./.	./.	0/1:18,0:27:0.49:0,0,104	1/1:9,5:18:3.01:71,3,0	0/1:19,2:23:38.04:114,0,38	1/1:24,0:22:9.62:72,10,0	1/1:5,0:15:11.86:51,12,0	0/1:17,5:26:58.53:342,0,59	1/1:13,0:23:3.25:14,3,0	0/0:10,0:10:2.86:0,3,21	0/1:8,0:11:6.47:6,0,41	1/1:5,0:13:5.49:24,5,0	0/1:6,2:11:21.94:65,0,22	0/1:9,0:16:32.12:35,0,32	0/1:14,0:23:69.14:73,0,69	1/1:8,7:17:12.04:267,12,0	0/1:11,0:15:29.46:79,0,29	1/1:14,0:14:8.73:60,9,0	0/1:29,0:28:52.83:66,0,53	0/1:7,0:14:6.46:6,0,41	0/1:18,0:19:28.42:28,0,30	1/1:11,5:20:11.78:224,12,0	1/1:10,0:21:8.71:38,9,0	1/1:18,0:18:16.40:199,16,0	1/1:16,0:16:8.99:87,9,0	1/1:4,0:13:15.81:68,16,0
chr10	36952836	.	C	CTAAGTGGCTGGAGTGAAGGAAGC	42710.83	PASS	AB=0.791;AC=54;AF=0.964;AN=56;BaseQRankSum=-5.578;DP=310;FS=10.396;HRun=0;HaplotypeScore=322.2400;InbreedingCoeff=-0.0566;MQ=75.14;MQ0=0;MQRankSum=-1.217;QD=137.78;ReadPosRankSum=1.804;VQSLOD=3.3062;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:20:49.37:3242,49,0	1/1:7,0:7:15.05:1100,15,0	0/1:7,0:9:92.89:474,0,93	0/1:9,1:13:10.91:1777,0,11	1/1:10,0:10:10.34:529,10,0	1/1:14,0:14:26.42:1991,26,0	1/1:22,0:22:60.15:3349,60,0	1/1:9,0:9:21.06:1014,21,0	1/1:13,0:13:11.33:1005,11,0	1/1:13,0:12:36.12:2717,36,0	1/1:7,0:7:15.01:990,15,0	1/1:15,0:15:28.57:2050,29,0	1/1:16,0:16:48.15:2829,48,0	1/1:11,0:11:14.96:1450,15,0	1/1:10,0:10:3.63:1021,4,0	1/1:8,0:8:21.07:1529,21,0	1/1:7,0:6:18.06:1224,18,0	1/1:8,0:8:18.06:1594,18,0	1/1:11,0:11:30.09:1384,30,0	1/1:7,0:7:21.03:748,21,0	1/1:11,0:11:30:1308,30,0	1/1:13,0:13:24.85:1107,25,0	1/1:4,0:4:9.03:503,9,0	1/1:12,0:11:30.06:1852,30,0	1/1:11,0:11:29.92:1028,30,0	1/1:13,0:13:3.83:1507,4,0	1/1:12,0:12:33.11:2768,33,0	1/1:4,0:4:12.04:620,12,0
chr10	36952837	.	T	TAAGTGGCTGGAGTGAAGGAAGCATC	4821.75	PASS	AB=0.798;AC=42;AF=0.955;AN=44;BaseQRankSum=-3.973;DP=78;FS=11.353;HRun=0;HaplotypeScore=50.0941;InbreedingCoeff=-0.1435;MQ=121.30;MQ0=0;MQRankSum=-3.582;QD=65.16;ReadPosRankSum=-1.140;VQSLOD=2.1775;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	1/1:1,0:1:3.01:52,3,0	0/1:5,0:7:95.90:188,0,96	0/1:7,1:9:24.70:1072,0,25	1/1:1,0:1:3.01:39,3,0	1/1:3,0:3:9.03:344,9,0	1/1:4,0:4:9.03:211,9,0	1/1:4,0:4:9.02:136,9,0	1/1:3,0:3:9.03:231,9,0	1/1:4,0:3:9.03:278,9,0	./.	1/1:2,0:2:6.02:144,6,0	1/1:4,0:4:12.03:350,12,0	1/1:1,0:1:3.01:107,3,0	./.	1/1:2,0:2:6.02:214,6,0	1/1:2,0:2:3.01:102,3,0	./.	1/1:2,0:2:6.01:83,6,0	1/1:4,0:4:12.04:202,12,0	1/1:6,0:6:15.03:513,15,0	1/1:5,0:5:12.04:149,12,0	./.	1/1:3,0:3:6.02:158,6,0	1/1:3,0:3:9.02:102,9,0	1/1:2,0:2:3:27,3,0	./.	1/1:2,0:2:6.02:118,6,0
chr10	36952906	.	CCA	C	1161.94	PASS	AB=0.848;AC=9;AF=0.161;AN=56;BaseQRankSum=-1.526;DP=1037;FS=10.188;HRun=0;HaplotypeScore=211.5570;InbreedingCoeff=0.5747;MQ=38.92;MQ0=20;MQRankSum=0.955;QD=5.84;ReadPosRankSum=-0.687;VQSLOD=2.2332;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:38:27.02:0,27,382	0/0:29,0:29:29.97:0,30,359	0/0:30,0:13:33.47:0,33,377	0/0:28,0:14:32.34:0,32,376	0/0:44,0:44:6.02:0,6,86	0/0:30,0:31:23.30:0,23,232	0/0:27,0:29:26.75:0,27,372	0/0:40,0:48:99:0,106,1181	0/0:33,1:35:30.36:0,30,414	0/0:79,0:75:99:0,121,1157	0/0:34,0:34:11.87:0,12,182	1/1:19,11:31:20.74:242,21,0	0/0:38,1:40:8.52:0,9,434	0/0:33,0:33:26.97:0,27,381	0/0:29,0:29:39.59:0,40,581	0/0:17,0:18:19.42:0,19,249	0/0:25,0:25:36.83:0,37,493	0/0:14,0:14:8.90:0,9,293	0/0:34,0:29:44.67:0,45,505	0/0:44,0:43:20.22:0,20,228	0/0:34,0:33:42.14:0,42,657	0/0:66,2:67:27.29:0,27,405	1/1:41,9:51:20.72:232,21,0	1/1:11,10:21:26.99:320,27,0	0/0:67,1:68:43.73:0,44,493	0/1:48,8:56:99:324,0,432	0/1:21,1:22:4.32:4,0,301	0/1:7,5:12:33.63:193,0,34
chr10	36953363	.	G	GTTGTTTGTTTGT	12740.57	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-3.197;DP=669;FS=10.610;HRun=0;HaplotypeScore=212.6900;InbreedingCoeff=0.9617;MQ=61.56;MQ0=4;MQRankSum=-12.906;QD=43.19;ReadPosRankSum=-3.828;VQSLOD=2.6278;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:19,17:44:58.75:3042,59,0	0/0:10,0:10:21.07:0,21,657	0/0:26,0:20:27.09:0,27,724	0/0:25,0:21:30.08:0,30,714	0/0:18,0:18:33.10:0,33,853	1/1:10,6:20:18.06:1053,18,0	1/1:16,9:31:21.07:1231,21,0	0/0:29,0:29:42.13:0,42,1225	0/0:35,0:35:81.24:0,81,2567	1/1:21,7:32:36.12:1493,36,0	1/1:5,3:9:6.91:354,7,0	1/1:12,0:35:48.16:1278,48,0	0/0:38,0:38:81.25:0,81,2356	0/0:34,0:34:69.22:0,69,2298	1/1:18,12:37:36.12:2080,36,0	0/0:24,0:24:51.17:0,51,1587	0/0:33,0:33:81.14:0,81,2533	1/1:8,3:14:11.63:454,12,0	0/0:14,0:14:21.07:0,21,596	0/0:15,0:15:33.11:0,33,1109	0/0:22,0:23:51.18:0,51,1654	0/0:13,0:13:27.09:0,27,942	1/1:4,0:8:9.92:242,10,0	1/1:9,0:21:15.05:393,15,0	0/0:11,0:11:27.09:0,27,895	1/1:17,2:22:11.95:417,12,0	0/0:26,0:26:48.14:0,48,1517	1/1:15,4:20:12.04:703,12,0
chr10	36953671	.	CT	C	5799.57	PASS	AB=0.612;AC=42;AF=0.750;AN=56;BaseQRankSum=3.395;DP=568;FS=14.024;HRun=13;HaplotypeScore=75.1912;InbreedingCoeff=0.6806;MQ=68.17;MQ0=11;MQRankSum=-0.143;QD=12.77;ReadPosRankSum=0.792;VQSLOD=3.6006;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,33:38:60.32:605,60,0	1/1:3,13:16:6.62:212,7,0	0/0:14,1:14:2.06:0,2,153	0/0:15,0:13:10.23:0,10,97	0/0:21,0:21:41.79:0,42,367	1/1:3,12:16:39.86:274,40,0	1/1:5,19:23:41.38:323,41,0	1/1:18,23:38:38.60:396,39,0	0/0:15,0:14:18.50:0,19,176	1/1:10,20:28:56.18:401,56,0	1/1:7,10:16:28.77:201,29,0	1/1:4,10:14:20.87:153,21,0	1/1:8,4:13:25.80:175,26,0	1/1:6,13:19:23.85:175,24,0	1/1:4,8:11:20.86:153,21,0	0/0:10,1:11:8.09:0,8,230	0/0:35,1:35:53.17:0,53,663	1/1:5,18:22:53.63:394,54,0	0/1:7,9:17:48.55:126,0,49	0/1:6,12:19:38.54:165,0,39	1/1:9,7:15:22.42:158,22,0	1/1:7,10:16:20.86:153,21,0	1/1:2,11:11:29.79:215,30,0	1/1:4,12:16:0.67:168,1,0	1/1:3,13:16:10.79:197,11,0	1/1:7,24:29:68.15:501,68,0	1/1:4,19:23:53.68:394,54,0	1/1:5,13:17:35.78:262,36,0
chr10	36954724	.	GA	G	1225.05	PASS	AB=0.845;AC=34;AF=0.607;AN=56;BaseQRankSum=4.278;DP=497;FS=9.898;HRun=15;HaplotypeScore=64.4806;InbreedingCoeff=0.5024;MQ=60.31;MQ0=11;MQRankSum=-0.055;QD=3.72;ReadPosRankSum=4.244;VQSLOD=-0.2156;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,2:33:15.45:0,15,329	1/1:2,6:7:11.82:77,12,0	0/0:17,0:7:12.81:0,13,93	0/1:11,0:6:4.05:4,0,32	0/0:22,0:25:33.53:0,34,248	0/1:11,2:19:11.73:12,0,181	0/1:13,2:16:6.56:7,0,207	1/1:7,15:22:11.16:193,11,0	0/0:8,0:8:14.97:0,15,126	0/0:15,1:16:12.18:0,12,193	0/0:19,3:22:4.70:0,5,262	1/1:2,0:10:8.14:23,8,0	1/1:7,9:16:17.55:114,18,0	1/1:2,15:17:26.60:173,27,0	0/1:16,1:17:21.38:21,0,95	0/0:19,0:24:37.67:0,38,322	0/1:17,5:23:45.28:45,0,244	0/0:21,0:20:32.96:0,33,281	1/1:7,3:10:8.91:64,9,0	0/1:13,9:21:3.59:108,0,4	1/1:2,9:12:16.79:102,17,0	1/1:8,11:22:7.40:116,7,0	1/1:13,0:18:15.67:61,16,0	1/1:5,0:20:20.35:59,20,0	1/1:10,8:19:3.15:98,3,0	1/1:6,0:12:8.09:23,8,0	1/1:10,11:21:14.23:86,14,0	1/1:3,0:9:12.20:35,12,0
chr10	36955021	.	TAC	T	3500.03	PASS	AB=0.860;AC=35;AF=0.625;AN=56;BaseQRankSum=11.294;DP=633;FS=2.356;HRun=0;HaplotypeScore=100.5884;InbreedingCoeff=0.3549;MQ=61.95;MQ0=12;MQRankSum=-0.346;QD=7.68;ReadPosRankSum=3.630;VQSLOD=3.1982;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:45,3:48:68.01:68,0,827	1/1:1,4:5:9.03:103,9,0	0/0:25,0:14:12.03:0,12,148	0/0:37,0:20:8.30:0,8,68	0/1:12,1:13:13.45:13,0,210	0/1:16,2:18:2.04:2,0,369	0/0:21,1:22:15.44:0,15,479	0/1:10,10:19:25.43:176,0,25	0/0:37,2:39:12.29:0,12,1045	0/1:10,1:11:7.42:7,0,324	0/1:11,0:11:7.33:7,0,291	1/1:3,0:17:25.44:126,25,0	1/1:4,16:20:36.10:413,36,0	1/1:7,10:18:23.90:255,24,0	0/1:27,5:32:58.14:58,0,854	0/0:29,0:29:62.38:0,62,876	0/1:43,2:44:49.33:49,0,1228	0/0:25,0:25:48.63:0,49,745	1/1:10,8:16:6.87:235,7,0	1/1:2,7:9:21.06:241,21,0	1/1:16,27:43:50.79:534,51,0	1/1:3,10:14:17.88:186,18,0	1/1:4,0:15:19.84:97,20,0	1/1:14,0:39:47.77:237,48,0	1/1:8,12:22:26.74:269,27,0	0/1:3,0:14:1.97:98,0,2	1/1:8,8:16:24.06:268,24,0	1/1:1,0:5:11.36:56,11,0
chr10	36957256	.	GGGAA	G	16775.67	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=15.056;DP=662;FS=7.754;HRun=0;HaplotypeScore=120.6139;InbreedingCoeff=0.9999;MQ=81.47;MQ0=0;MQRankSum=-6.880;QD=50.08;ReadPosRankSum=2.603;VQSLOD=5.9926;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,120,3258	1/1:0,12:12:36.12:697,36,0	0/0:26,0:26:72.14:0,72,1666	0/0:24,0:24:66.01:0,66,1695	0/0:17,0:17:48.15:0,48,1254	0/0:34,0:34:99:0,99,2531	0/0:25,0:25:75.24:0,75,1997	1/1:2,29:31:87.28:1641,87,0	0/0:27,0:27:78.27:0,78,2136	0/0:27,0:27:81.27:0,81,2128	0/0:20,0:20:60.20:0,60,1565	1/1:0,21:21:60.21:1158,60,0	1/1:0,26:26:75.26:1451,75,0	1/1:0,14:14:36.12:697,36,0	0/0:25,0:25:75.26:0,75,2030	0/0:28,0:28:84.29:0,84,2302	0/0:18,0:18:54.17:0,54,1420	0/0:15,0:15:39.10:0,39,1007	1/1:2,18:20:51.03:767,51,0	1/1:0,26:26:75.26:1452,75,0	1/1:1,23:24:51.17:983,51,0	1/1:0,20:20:54.19:1046,54,0	1/1:0,24:24:60.20:1162,60,0	1/1:0,21:21:48.16:930,48,0	1/1:0,18:18:48.16:929,48,0	1/1:0,29:29:84.22:1479,84,0	1/1:2,36:38:90.31:1743,90,0	1/1:0,11:11:33.11:639,33,0
chr10	36958388	.	GACAA	G	446.07	PASS	AB=0.813;AC=6;AF=0.115;AN=52;BaseQRankSum=4.651;DP=848;FS=1.020;HRun=0;HaplotypeScore=66.2968;InbreedingCoeff=-0.1503;MQ=40.11;MQ0=94;MQRankSum=-3.433;QD=2.51;ReadPosRankSum=-2.429;VQSLOD=0.5228;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:65,0:59:54.17:0,54,1281	0/0:14,0:14:30.08:0,30,637	./.	./.	0/0:28,0:26:18.06:0,18,434	0/1:23,11:25:32.28:32,0,353	0/1:28,11:33:99:325,0,122	0/1:19,0:8:27.17:27,0,253	0/0:34,0:31:30.10:0,30,744	0/0:49,0:36:87.18:0,87,1926	0/0:25,0:23:17.96:0,18,333	0/0:31,0:28:9.03:0,9,223	0/0:27,0:26:26.93:0,27,663	0/0:28,0:24:12.04:0,12,297	0/0:39,1:37:18.06:0,18,434	0/0:20,0:20:18.53:0,19,447	0/0:60,0:51:30.98:0,31,672	0/0:21,0:20:30.05:0,30,688	0/1:23,4:16:99:109,0,681	0/0:26,1:27:1.97:0,2,1048	0/1:28,15:36:29.54:30,0,376	0/0:28,0:28:27.08:0,27,593	0/0:21,0:20:12.04:0,12,273	0/0:35,0:35:45.15:0,45,1064	0/0:24,0:24:48.16:0,48,1186	0/0:42,0:36:99:0,99,2207	0/1:10,6:15:44.33:44,0,68	0/0:14,0:11:9.03:0,9,223
chr10	36958789	.	C	CT	1892.85	PASS	AB=0.722;AC=12;AF=0.214;AN=56;BaseQRankSum=-6.436;DP=610;FS=2.736;HRun=11;HaplotypeScore=66.8422;InbreedingCoeff=0.5155;MQ=44.96;MQ0=42;MQRankSum=-3.286;QD=10.52;ReadPosRankSum=-0.577;VQSLOD=2.9298;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,16:21:15.81:331,16,0	0/0:9,0:9:16.98:0,17,122	0/0:11,0:4:5.97:0,6,46	0/0:10,0:4:8.87:0,9,62	0/0:22,1:19:6.80:0,7,227	1/1:7,17:22:14.19:388,14,0	0/1:11,4:10:8.20:107,0,8	0/0:21,1:20:8.40:0,8,246	0/0:22,0:21:53.79:0,54,417	0/1:13,9:19:56.85:189,0,57	1/1:5,17:18:48.06:477,48,0	0/0:20,1:19:29.89:0,30,232	0/0:15,4:17:5.45:0,5,225	0/0:23,4:24:16.44:0,16,300	0/1:8,16:19:47.82:288,0,48	0/0:22,0:21:56.77:0,57,441	0/0:27,0:27:64.79:0,65,493	1/1:6,9:11:21.04:213,21,0	0/0:28,1:23:52.80:0,53,396	0/0:24,1:27:59.89:0,60,435	0/0:27,1:28:50.73:0,51,391	0/0:16,1:16:34.84:0,35,256	0/0:18,0:18:43.85:0,44,329	0/0:10,0:10:26.89:0,27,209	0/0:20,0:20:44.79:0,45,346	0/1:19,6:25:71.35:71,0,309	0/0:27,2:26:53.78:0,54,418	0/0:19,1:19:44.83:0,45,348
chr10	36961277	.	ACT	A	3014.35	PASS	AB=0.981;AC=40;AF=0.714;AN=56;BaseQRankSum=-0.223;DP=484;FS=1.077;HRun=0;HaplotypeScore=82.9939;InbreedingCoeff=0.6195;MQ=69.52;MQ0=4;MQRankSum=-2.143;QD=8.35;ReadPosRankSum=1.377;VQSLOD=2.8752;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:23:15.41:280,15,0	1/1:4,0:4:8.94:68,9,0	0/0:26,0:19:35.03:0,35,335	0/0:21,0:16:30.70:0,31,276	0/0:11,0:11:29.97:0,30,311	0/1:25,0:25:10.21:215,0,10	1/1:20,0:20:9.02:193,9,0	1/1:19,0:19:29.09:408,29,0	0/0:18,0:18:29.84:0,30,289	1/1:11,0:10:5.39:136,5,0	0/0:5,0:5:2.90:0,3,16	1/1:14,0:14:5.99:50,6,0	1/1:16,0:16:17.52:133,18,0	1/1:22,0:22:23.97:201,24,0	1/1:13,0:13:13.44:195,13,0	0/0:16,0:16:30.03:0,30,322	0/0:26,0:25:69.02:0,69,774	0/1:25,1:26:30.05:255,0,30	1/1:15,0:14:38.79:305,39,0	1/1:17,0:17:8.94:69,9,0	1/1:43,0:43:3:25,3,0	1/1:8,0:8:5.99:50,6,0	1/1:13,0:13:5.99:50,6,0	1/1:20,0:20:5.99:50,6,0	1/1:15,0:15:11.87:83,12,0	1/1:0,17:17:38.97:344,39,0	1/1:14,0:14:5.99:50,6,0	1/1:0,6:6:3.01:44,3,0
chr10	36961278	.	CTCTGTGTGTG	C	4360.84	PASS	AB=1.000;AC=33;AF=0.589;AN=56;BaseQRankSum=-1.421;DP=483;FS=2.227;HRun=0;HaplotypeScore=126.5182;InbreedingCoeff=0.3167;MQ=67.56;MQ0=5;MQRankSum=-3.167;QD=12.39;ReadPosRankSum=-1.714;VQSLOD=3.4919;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:25:99:150,0,1009	1/1:4,0:4:8.94:68,9,0	0/0:25,0:18:35.11:0,35,433	0/0:20,0:15:30.72:0,31,363	0/0:13,0:12:30.05:0,30,1082	0/1:22,0:25:99:111,0,1118	0/1:16,0:18:99:123,0,632	1/1:19,0:19:2.04:380,2,0	0/0:19,0:19:30:0,30,842	0/1:13,0:12:4.31:4,0,603	0/0:4,0:4:3.01:0,3,119	1/1:1,0:14:6.02:162,6,0	1/1:0,13:15:16.93:469,17,0	1/1:0,21:21:24.08:803,24,0	0/1:13,0:13:99:109,0,218	0/0:16,0:16:30.06:0,30,986	0/0:28,0:27:75.11:0,75,2363	0/1:19,0:25:99:119,0,1597	1/1:1,14:14:38.80:380,39,0	1/1:2,15:17:8.96:219,9,0	1/1:0,43:43:3.01:100,3,0	1/1:0,8:8:6.02:201,6,0	1/1:0,0:13:6.02:161,6,0	1/1:0,0:19:6.02:162,6,0	1/1:1,14:15:12.04:356,12,0	0/1:17,0:17:81.63:82,0,469	1/1:0,13:13:6.02:201,6,0	0/0:6,0:6:3.01:0,3,79
chr10	36961280	.	C	CTG	1043.64	PASS	AB=1.000;AC=18;AF=0.360;AN=50;BaseQRankSum=-5.329;DP=497;FS=4.528;HRun=0;HaplotypeScore=102.2611;InbreedingCoeff=0.2837;MQ=64.67;MQ0=7;MQRankSum=5.297;QD=4.52;ReadPosRankSum=-2.603;VQSLOD=2.2355;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:29:5.94:99,0,6	./.	./.	./.	0/1:15,0:13:11.83:36,0,12	1/1:26,0:26:12.04:174,12,0	0/1:19,0:18:10.98:80,0,11	0/1:19,0:18:0:0,0,0	1/1:12,5:17:8.62:99,9,0	1/1:12,0:11:5.97:45,6,0	1/1:4,0:4:3:25,3,0	0/0:13,0:13:5.68:0,6,28	0/0:15,0:15:13.83:0,14,69	0/0:21,0:21:22.73:0,23,111	1/1:19,0:19:6:51,6,0	1/1:10,2:16:11.82:128,12,0	0/1:29,0:28:5.57:214,0,6	0/1:26,0:26:11.62:242,0,12	0/0:15,0:14:2.84:0,3,14	0/0:15,0:15:5.68:0,6,28	0/0:44,0:44:2.84:0,3,14	0/0:8,0:8:5.68:0,6,28	0/0:14,0:14:5.68:0,6,28	0/0:19,0:19:5.66:0,6,28	0/0:14,0:14:3.78:0,4,15	0/0:21,0:21:1.39:0,1,13	0/0:14,0:14:5.51:0,6,27	0/0:6,0:6:2.90:0,3,16
chr10	36965121	.	G	GT	546.26	PASS	AB=0.983;AC=6;AF=0.107;AN=56;BaseQRankSum=-1.456;DP=426;FS=4.970;HRun=9;HaplotypeScore=73.3505;InbreedingCoeff=0.5553;MQ=77.44;MQ0=5;MQRankSum=-0.751;QD=6.28;ReadPosRankSum=0.231;VQSLOD=1.1002;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:31.76:0,32,264	0/0:6,0:6:8.99:0,9,78	0/1:27,0:17:7.06:7,0,65	0/1:28,0:16:17.50:30,0,17	0/0:28,1:30:38.18:0,38,537	0/0:15,0:15:38.99:0,39,337	0/0:16,0:16:43.22:0,43,365	0/0:11,0:12:26.02:0,26,214	0/0:11,0:11:26.96:0,27,227	0/0:18,0:18:35.97:0,36,310	0/0:20,0:20:50.94:0,51,435	0/0:15,0:15:38.48:0,38,318	0/0:9,0:9:17.87:0,18,156	0/0:8,0:8:15.27:0,15,152	0/0:14,0:14:32.96:0,33,286	0/0:6,0:6:17.98:0,18,152	0/0:21,0:21:56.98:0,57,494	0/0:17,1:18:2.13:0,2,243	0/0:18,1:19:14.82:0,15,355	0/0:10,0:10:26.98:0,27,234	0/0:5,0:5:14.99:0,15,127	0/0:6,0:6:14.53:0,15,130	0/0:18,0:18:32.91:0,33,286	0/0:15,0:15:38.93:0,39,327	0/0:16,0:16:23.76:0,24,203	1/1:4,16:20:25.09:505,25,0	0/0:16,0:16:21.09:0,21,312	1/1:2,7:10:12.50:134,13,0
chr10	36967229	.	G	GCT	9263.65	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-15.794;DP=687;FS=6.088;HRun=0;HaplotypeScore=94.0914;InbreedingCoeff=0.9937;MQ=94.09;MQ0=1;MQRankSum=-0.524;QD=40.99;ReadPosRankSum=-0.188;VQSLOD=6.5376;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,120,1486	1/1:2,4:6:15.05:253,15,0	0/0:40,0:40:51.02:0,51,779	0/0:46,0:41:36.44:0,36,538	0/0:17,0:17:51.16:0,51,651	0/0:13,0:13:36.11:0,36,454	0/0:38,0:38:93.27:0,93,1179	1/1:6,27:35:87.26:1397,87,0	0/0:23,0:23:66.21:0,66,858	0/0:26,0:26:72.21:0,72,911	0/0:8,0:8:21.07:0,21,272	0/0:26,0:26:75.22:0,75,948	1/1:4,20:23:54.18:917,54,0	1/1:3,25:28:66.23:1122,66,0	0/0:23,0:23:57.19:0,57,741	0/0:22,0:22:63.20:0,63,819	0/0:56,0:56:99:0,153,1943	0/0:30,0:30:87.28:0,87,1132	1/1:2,14:16:39.13:657,39,0	1/1:2,8:10:24.03:376,24,0	1/1:3,59:61:99:2908,172,0	1/1:0,14:14:23.93:408,24,0	0/0:9,0:9:27.09:0,27,351	0/0:24,0:24:63.20:0,63,819	1/1:1,10:11:30.10:510,30,0	0/0:13,0:13:30.07:0,30,350	1/1:1,18:20:42.14:714,42,0	0/0:5,0:5:15.05:0,15,195
chr10	36968697	.	A	AACAC	5184.31	PASS	AB=0.658;AC=33;AF=0.611;AN=54;BaseQRankSum=0.798;DP=554;FS=7.217;HRun=0;HaplotypeScore=114.3712;InbreedingCoeff=0.4960;MQ=56.31;MQ0=3;MQRankSum=-1.277;QD=14.81;ReadPosRankSum=-3.022;VQSLOD=3.4614;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:16,16:39:37.78:805,38,0	1/1:8,0:9:11.92:122,12,0	0/0:28,0:15:6.01:0,6,73	0/0:20,0:16:0.59:0,1,74	0/0:18,0:18:14.12:0,14,306	1/1:2,12:17:22.79:516,23,0	1/1:11,7:22:20.27:325,20,0	1/1:23,0:22:33.30:373,33,0	0/0:22,0:22:44.99:0,45,646	0/1:9,11:21:0.41:623,0,0	1/1:1,8:12:20.54:385,21,0	1/1:6,0:18:8.68:156,9,0	1/1:11,0:11:0.89:2,1,0	1/1:8,0:17:5.90:77,6,0	0/1:5,1:8:36.37:125,0,36	0/0:17,0:18:39.09:0,39,577	0/0:32,0:36:81.19:0,81,1181	1/1:12,14:28:44.62:900,45,0	1/1:10,0:19:22.76:307,23,0	0/1:7,0:15:0.35:0,0,0	1/1:16,0:15:0.47:1,0,0	0/0:3,1:16:0:0,0,1	1/1:8,0:17:4.99:38,5,0	0/0:11,0:18:0.89:0,1,2	./.	0/1:13,0:36:99:279,0,172	1/1:3,0:11:6.02:104,6,0	0/1:4,0:8:1.69:45,0,2
chr10	36969359	.	G	GGTGTGT	1793.67	PASS	AB=0.982;AC=29;AF=0.630;AN=46;BaseQRankSum=0.218;DP=556;FS=4.034;HRun=0;HaplotypeScore=150.4653;InbreedingCoeff=0.1833;MQ=66.31;MQ0=5;MQRankSum=-2.053;QD=4.33;ReadPosRankSum=-1.305;VQSLOD=2.4199;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:32,0:32:5.95:109,6,0	./.	./.	./.	./.	0/1:17,0:17:8.97:59,0,9	1/1:26,0:26:2.09:21,2,0	0/1:21,0:21:0:0,0,0	0/1:22,0:22:5.03:5,0,195	0/1:20,0:20:15.66:54,0,16	0/1:11,0:11:0:0,0,0	1/1:29,0:29:18.06:358,18,0	1/1:19,0:19:12.04:276,12,0	0/1:21,4:26:46.46:160,0,46	1/1:10,0:14:3.01:38,3,0	0/0:7,0:7:3.01:0,3,35	0/0:29,0:32:33.52:0,34,466	1/1:16,0:16:10.34:92,10,0	1/1:14,0:17:8.13:210,8,0	./.	1/1:46,0:44:0.08:72,0,0	0/1:12,0:11:0:0,0,0	0/1:13,0:11:0:0,0,0	0/1:40,0:39:13.22:48,0,13	1/1:14,0:13:9.03:170,9,0	0/0:13,0:15:1.84:0,2,6	1/1:13,6:19:9.03:246,9,0	0/0:10,0:10:2.68:0,3,41
chr10	36971383	.	A	AGCCC	16511.42	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=15.688;DP=650;FS=5.263;HRun=0;HaplotypeScore=110.9323;InbreedingCoeff=0.9902;MQ=86.53;MQ0=0;MQRankSum=-10.437;QD=75.74;ReadPosRankSum=0.748;VQSLOD=6.6738;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,114,2388	1/1:1,6:7:21.07:607,21,0	0/0:28,0:28:84.07:0,84,1646	0/0:22,0:22:63.19:0,63,1216	0/0:16,0:16:48.16:0,48,991	0/0:14,0:14:39.13:0,39,817	0/0:28,0:28:84.29:0,84,1749	1/1:3,17:25:72.24:1944,72,0	0/0:25,0:25:75.24:0,75,1534	0/0:32,0:32:93.31:0,93,1908	0/0:14,0:14:42.14:0,42,880	0/0:31,0:31:93.31:0,93,1879	1/1:1,30:32:81.17:2342,81,0	1/1:2,18:20:60.21:1734,60,0	0/0:35,0:35:99:0,105,2201	0/0:24,0:24:72.22:0,72,1417	0/0:24,0:24:72.24:0,72,1473	0/0:30,0:30:90.31:0,90,1866	1/1:5,10:16:48.15:1239,48,0	1/1:2,23:27:72.20:2015,72,0	1/1:1,20:25:54.19:1550,54,0	1/1:3,18:21:57.20:1644,57,0	0/0:22,0:22:60.16:0,60,1214	0/0:18,0:18:54.17:0,54,1088	1/1:0,8:10:21.07:608,21,0	0/0:28,0:28:84.29:0,84,1761	1/1:2,28:34:99:2829,99,0	0/0:3,0:3:9.03:0,9,188
chr10	36971658	.	CCCA	C	4960.67	PASS	AC=18;AF=0.333;AN=54;BaseQRankSum=9.504;DP=505;FS=16.011;HRun=0;HaplotypeScore=84.0299;InbreedingCoeff=0.9023;MQ=81.63;MQ0=0;MQRankSum=-4.658;QD=31.40;ReadPosRankSum=1.373;VQSLOD=4.3291;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,120,2536	./.	0/0:30,0:27:69.15:0,69,1203	0/0:31,0:30:78.21:0,78,1507	0/0:6,0:6:18.06:0,18,352	0/0:12,0:12:30.09:0,30,587	0/0:29,0:29:75.26:0,75,1574	1/1:2,20:22:60.19:890,60,0	0/0:19,0:19:51.15:0,51,1010	0/0:8,0:8:18.06:0,18,366	0/0:2,0:2:6.02:0,6,124	0/0:19,0:19:51.16:0,51,1036	1/1:2,13:15:33.11:506,33,0	1/1:4,19:23:39.13:597,39,0	0/0:21,0:21:60.18:0,60,1213	0/0:23,0:23:54.19:0,54,1136	0/0:25,0:25:63.22:0,63,1336	0/0:22,0:22:57.20:0,57,1215	1/1:2,9:11:27.09:410,27,0	1/1:2,8:10:21.07:322,21,0	1/1:5,42:47:93.31:1408,93,0	1/1:1,1:2:3.01:46,3,0	0/0:4,0:4:6.02:0,6,128	0/0:35,0:35:96.33:0,96,1991	1/1:1,2:3:6.02:92,6,0	0/0:15,0:15:45.14:0,45,899	1/1:9,16:23:45.15:690,45,0	0/0:3,0:3:6.02:0,6,128
chr10	36972454	.	ACG	A	1693.08	PASS	AC=16;AF=0.296;AN=54;BaseQRankSum=5.616;DP=488;FS=5.349;HRun=0;HaplotypeScore=118.6492;InbreedingCoeff=0.9056;MQ=67.98;MQ0=2;MQRankSum=-2.053;QD=10.92;ReadPosRankSum=-1.843;VQSLOD=2.4714;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:48.11:0,48,831	./.	0/0:12,0:9:21.41:0,21,270	0/0:9,0:9:11.65:0,12,128	0/0:18,0:18:54.18:0,54,1004	0/0:11,0:11:18.06:0,18,333	0/0:28,0:28:63.69:0,64,1148	1/1:8,10:17:33.04:431,33,0	0/0:16,0:16:48.15:0,48,869	0/0:15,0:15:45.15:0,45,847	0/0:10,0:10:15.05:0,15,276	0/0:19,0:19:33.10:0,33,541	1/1:6,10:16:18.52:225,19,0	1/1:8,10:18:21.95:262,22,0	0/0:16,0:16:27.05:0,27,455	0/0:20,0:20:57.15:0,57,1039	0/0:27,0:27:81.28:0,81,1549	0/0:15,0:15:42.14:0,42,796	1/1:4,5:9:14.51:186,15,0	1/1:3,16:19:1.62:47,2,0	1/1:21,20:40:27.09:307,27,0	0/0:6,8:14:4.81:0,5,18	0/0:14,0:14:23.93:0,24,447	0/0:29,0:28:31.05:0,31,569	1/1:7,6:13:5.98:47,6,0	0/0:25,0:25:63.22:0,63,1190	1/1:11,10:21:28.49:380,28,0	0/0:6,0:6:18.06:0,18,332
chr10	36972465	.	CGT	C	617.26	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=9.183;DP=455;FS=0.000;HRun=0;HaplotypeScore=111.5283;InbreedingCoeff=0.5231;MQ=51.63;MQ0=7;MQRankSum=-1.591;QD=3.41;ReadPosRankSum=-2.192;VQSLOD=2.0127;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:27.54:0,28,395	1/1:5,0:5:2.98:22,3,0	0/0:7,0:1:3.01:0,3,34	0/1:10,0:3:0:0,0,0	0/0:22,0:22:63:0,63,936	0/1:10,0:10:1.83:2,0,224	0/0:24,0:23:29.17:0,29,673	1/1:16,0:13:17.53:182,18,0	0/0:18,0:18:50.85:0,51,685	0/0:15,0:13:39.12:0,39,655	0/0:9,0:9:12.51:0,13,186	0/0:12,0:12:14.85:0,15,228	1/1:10,3:13:19.89:123,20,0	1/1:14,0:14:17.21:94,17,0	0/0:14,0:14:0.64:0,1,277	0/0:19,0:19:56.82:0,57,820	0/0:37,0:37:99:0,105,1501	0/0:16,1:17:8.42:0,8,557	0/1:9,0:9:38.37:60,0,38	1/1:16,0:16:0.49:12,0,0	1/1:42,0:41:15.74:81,16,0	0/1:10,0:10:18.52:27,0,19	0/0:10,0:10:15.38:0,15,221	0/0:30,0:29:25.97:0,26,395	1/1:8,5:13:2.97:20,3,0	0/0:24,0:24:60.09:0,60,1026	1/1:17,0:17:16.08:150,16,0	0/1:6,0:6:25.03:25,0,188
chr10	36972468	.	G	GCACACACACACA	5598.19	PASS	AB=0.894;AC=40;AF=0.769;AN=52;BaseQRankSum=3.781;DP=558;FS=12.767;HRun=0;HaplotypeScore=229.7282;InbreedingCoeff=0.5229;MQ=47.07;MQ0=8;MQRankSum=-5.518;QD=12.61;ReadPosRankSum=-3.503;VQSLOD=1.7026;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	1/1:5,0:5:3.01:69,3,0	0/0:9,0:2:3:0,3,28	0/0:11,0:5:3.01:0,3,39	0/0:21,0:22:21.07:0,21,664	1/1:15,0:15:6.02:163,6,0	1/1:35,0:34:18.52:452,19,0	1/1:25,0:22:30.09:708,30,0	0/0:15,0:19:42.14:0,42,1177	1/1:16,0:14:6.02:130,6,0	./.	1/1:15,4:21:12.04:513,12,0	1/1:18,0:19:17.80:398,18,0	1/1:18,0:18:2.89:22,3,0	1/1:20,0:19:6.02:141,6,0	0/0:14,0:18:30.10:0,30,693	0/1:30,0:36:37.33:37,0,2327	1/1:19,0:19:15.52:321,16,0	1/1:11,0:10:16.30:435,16,0	1/1:14,0:17:6.02:129,6,0	1/1:47,0:46:7.63:131,8,0	1/1:10,0:11:6:64,6,0	1/1:9,2:11:3.01:141,3,0	0/1:27,5:36:0:0,0,0	1/1:19,0:19:3.01:71,3,0	1/1:36,0:36:42.14:1269,42,0	1/1:14,1:16:6.02:190,6,0	1/1:10,0:10:10.72:213,11,0
chr10	36973157	.	AT	A	2025.68	PASS	AB=0.716;AC=37;AF=0.661;AN=56;BaseQRankSum=6.462;DP=464;FS=2.561;HRun=15;HaplotypeScore=57.1452;InbreedingCoeff=0.1489;MQ=75.02;MQ0=3;MQRankSum=-1.771;QD=5.01;ReadPosRankSum=2.955;VQSLOD=1.9064;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,2:39:55.61:193,56,0	1/1:4,5:9:17.72:115,18,0	0/1:34,1:19:12.80:36,0,13	0/1:17,0:9:4.14:10,0,4	0/0:12,0:12:23.95:0,24,201	1/1:2,0:14:20.36:59,20,0	1/1:4,0:13:14.24:41,14,0	0/1:11,15:27:22.25:226,0,22	0/0:7,0:7:8.98:0,9,72	1/1:14,1:29:32.01:102,32,0	1/1:2,0:10:8.07:23,8,0	1/1:5,9:14:20.58:134,21,0	0/1:4,2:6:13.27:13,0,20	1/1:3,6:9:14.77:96,15,0	1/1:3,0:10:10.17:29,10,0	0/0:11,0:11:26.96:0,27,226	0/0:30,0:30:62.90:0,63,530	1/1:5,0:11:14.03:41,14,0	0/1:16,19:36:8.50:286,0,8	1/1:3,7:10:14.62:96,15,0	0/1:3,9:13:3.63:98,0,4	1/1:6,12:18:1.25:96,1,0	0/1:8,4:12:14.72:46,0,15	0/1:6,10:16:19.81:124,0,20	0/1:4,12:15:2.68:111,0,3	1/1:11,5:17:16.66:102,17,0	0/1:4,6:9:8.60:78,0,9	0/1:8,3:10:14.59:46,0,15
chr10	36973391	.	G	GGTGT	1532.91	PASS	AB=1.000;AC=32;AF=0.640;AN=50;BaseQRankSum=1.016;DP=613;FS=0.898;HRun=0;HaplotypeScore=124.6616;InbreedingCoeff=0.4695;MQ=59.13;MQ0=12;MQRankSum=-0.339;QD=3.78;ReadPosRankSum=0.290;VQSLOD=2.5430;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:27:15.05:221,15,0	1/1:7,0:7:1.25:3,1,0	./.	./.	0/0:13,0:13:3.48:0,3,47	1/1:15,0:15:8.92:142,9,0	1/1:17,9:28:0.20:0,0,0	1/1:23,0:22:1.82:5,2,0	0/0:30,0:30:18.43:0,18,216	1/1:25,0:24:16.33:176,16,0	1/1:12,0:12:5.69:49,6,0	1/1:27,0:27:21.03:289,21,0	0/1:14,0:13:1.14:20,0,1	0/0:19,0:17:2.88:0,3,15	1/1:28,0:26:23.90:184,24,0	0/1:16,0:17:26.60:27,0,83	0/0:26,0:26:10.20:0,10,330	1/1:20,0:23:23.80:320,24,0	0/0:18,0:17:2.80:0,3,13	0/0:12,0:12:0.47:0,0,1	1/1:60,0:58:0.92:1,1,0	./.	1/1:11,0:12:5.89:96,6,0	1/1:39,0:47:11.38:95,11,0	1/1:12,0:12:3:26,3,0	1/1:25,0:25:2.99:23,3,0	0/0:8,0:8:0.08:0,0,22	0/0:8,0:8:6.01:0,6,72
chr10	36973438	.	TGTG	T	841.88	PASS	AB=0.898;AC=18;AF=0.321;AN=56;BaseQRankSum=8.478;DP=601;FS=0.000;HRun=0;HaplotypeScore=111.4176;InbreedingCoeff=0.7421;MQ=46.54;MQ0=61;MQRankSum=-6.133;QD=5.20;ReadPosRankSum=-2.310;VQSLOD=2.1646;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:26:56.18:0,56,1173	0/1:3,1:4:0.05:0,0,0	0/0:53,0:8:17.25:0,17,211	0/0:70,0:10:30.10:0,30,659	0/0:15,0:15:36.12:0,36,789	0/0:12,0:12:21.20:0,21,439	0/0:30,0:29:60.51:0,61,1186	1/1:13,10:20:16.53:506,17,0	0/0:16,0:15:39.60:0,40,840	0/0:32,0:29:65.92:0,66,1289	0/0:16,0:16:19.84:0,20,523	0/0:28,0:28:38.52:0,39,1240	1/1:14,1:14:18.83:137,19,0	1/1:8,1:9:2.13:21,2,0	0/1:14,0:12:2.74:3,0,121	0/0:11,0:10:17.73:0,18,371	0/0:27,0:26:57.29:0,57,1461	0/0:22,0:22:29.95:0,30,859	1/1:11,5:13:17.79:220,18,0	1/1:7,1:8:0.47:2,0,0	0/1:33,4:35:0.51:1,0,1	0/1:9,1:10:0.05:0,0,0	0/0:13,0:11:24.08:0,24,540	0/0:40,0:40:28.82:0,29,851	1/1:11,1:12:3.19:22,3,0	0/0:19,0:19:51.17:0,51,1071	1/1:11,0:10:11.65:94,12,0	0/0:6,0:6:15.05:0,15,328
chr10	36973446	.	GGTA	G	575.12	PASS	AB=0.909;AC=16;AF=0.286;AN=56;BaseQRankSum=7.792;DP=568;FS=1.757;HRun=0;HaplotypeScore=106.7375;InbreedingCoeff=0.6807;MQ=46.59;MQ0=63;MQRankSum=-7.601;QD=4.36;ReadPosRankSum=-2.037;VQSLOD=1.4811;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:60.14:0,60,1307	0/0:3,1:4:1.25:0,1,3	0/0:61,0:9:17.96:0,18,278	0/0:77,0:14:36.06:0,36,753	0/0:15,0:15:36.12:0,36,886	0/0:10,0:10:24.08:0,24,543	0/0:29,0:28:63.52:0,64,1456	0/1:22,0:19:23.59:127,0,24	0/0:16,0:14:42.14:0,42,948	0/0:26,0:24:69.23:0,69,1558	0/0:13,0:13:24.08:0,24,575	0/0:25,0:25:60.51:0,61,1415	1/1:6,6:12:15.04:208,15,0	1/1:5,4:9:2.73:24,3,0	0/0:6,0:5:6.38:0,6,100	0/0:12,0:11:27.08:0,27,570	0/0:23,0:25:69:0,69,1595	0/0:20,0:20:28.72:0,29,1065	1/1:15,1:12:13.43:180,13,0	1/1:4,3:7:0.47:2,0,0	1/1:18,9:31:2.86:35,3,0	0/1:5,2:9:0.05:0,0,0	0/0:11,0:10:27.09:0,27,649	0/0:35,0:35:51.17:0,51,1169	1/1:3,6:10:0.47:2,0,0	0/0:20,0:19:53.97:0,54,1237	1/1:4,5:10:11.78:151,12,0	0/0:7,0:7:18.06:0,18,407
chr10	36973488	.	C	CCGTGTG	4273.31	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=7.712;DP=659;FS=8.423;HRun=0;HaplotypeScore=174.3619;InbreedingCoeff=0.9795;MQ=56.17;MQ0=20;MQRankSum=-8.466;QD=23.87;ReadPosRankSum=-4.585;VQSLOD=3.0391;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:40:99:0,114,2325	1/1:4,2:7:15.02:294,15,0	0/0:60,0:11:17.34:0,17,143	0/0:61,0:15:16.70:0,17,247	0/0:16,0:16:39.04:0,39,617	0/0:18,0:18:45.11:0,45,985	0/0:27,0:29:78.18:0,78,1495	1/1:13,0:13:35.08:335,35,0	0/0:19,0:18:48.08:0,48,998	0/0:29,0:30:87.17:0,87,1515	0/0:11,0:11:33.11:0,33,829	0/0:25,0:25:69.16:0,69,1409	1/1:9,3:16:38.19:1099,38,0	1/1:12,5:17:24.03:589,24,0	0/0:8,0:8:17.98:0,18,456	0/0:15,0:15:42.10:0,42,879	0/0:26,0:26:40.30:0,40,1788	0/0:28,0:29:85.37:0,85,1870	1/1:12,0:12:26.90:412,27,0	1/1:5,1:9:9.23:151,9,0	1/1:40,1:42:25.10:328,25,0	1/1:16,5:22:18.58:230,19,0	0/0:15,0:15:38.91:0,39,841	0/0:41,0:43:84.27:0,84,1858	1/1:16,1:19:15:335,15,0	0/0:26,0:26:72.17:0,72,1336	1/1:8,2:14:32.61:502,33,0	0/0:8,0:7:18:0,18,346
chr10	36973503	.	TGTGG	T	614.32	PASS	AB=0.942;AC=11;AF=0.196;AN=56;BaseQRankSum=7.422;DP=722;FS=0.000;HRun=0;HaplotypeScore=169.7532;InbreedingCoeff=-0.0399;MQ=56.28;MQ0=18;MQRankSum=0.403;QD=2.45;ReadPosRankSum=-7.499;VQSLOD=-0.0496;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,141,2732	0/1:7,1:8:20.02:42,0,20	0/0:59,0:13:10.23:0,10,316	0/1:65,0:21:12.19:12,0,244	0/0:15,0:15:38.95:0,39,649	0/0:19,0:19:54.16:0,54,1297	0/0:33,0:33:86.98:0,87,1511	0/1:14,0:11:28.67:86,0,29	0/0:25,0:24:72.12:0,72,1361	0/0:32,0:32:87.12:0,87,1810	0/0:11,0:11:33.11:0,33,850	0/0:24,0:24:69.17:0,69,1515	0/1:20,3:22:94.13:94,0,248	0/1:20,1:20:89.76:96,0,90	0/0:14,0:14:35.43:0,35,706	0/0:15,0:15:42.08:0,42,921	0/0:33,0:32:73.30:0,73,1930	0/0:31,0:31:82.97:0,83,1883	0/1:14,0:11:55.68:69,0,56	0/1:9,2:11:39.69:40,0,45	1/1:49,3:48:20.93:243,21,0	0/1:28,1:28:36.02:65,0,36	0/0:19,0:19:44.36:0,44,942	0/0:42,0:42:96.01:0,96,2123	0/0:17,0:16:0.47:0,0,104	0/0:26,0:26:52.21:0,52,1483	0/1:13,1:13:19.75:20,0,101	0/0:6,0:5:15.05:0,15,375
chr10	36973555	.	G	GGT	6471.65	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-3.039;DP=781;FS=7.162;HRun=0;HaplotypeScore=125.3532;InbreedingCoeff=0.9959;MQ=56.94;MQ0=21;MQRankSum=-0.083;QD=25.18;ReadPosRankSum=1.307;VQSLOD=5.9721;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:57:99:0,153,1896	1/1:4,8:12:15.03:246,15,0	0/0:50,0:26:53.92:0,54,578	0/0:52,0:32:63.18:0,63,752	0/0:14,0:14:39.11:0,39,469	0/0:15,0:15:36.10:0,36,434	0/0:27,0:27:63.18:0,63,765	1/1:12,13:25:45.13:689,45,0	0/0:33,0:32:89.59:0,90,1101	0/0:35,0:34:75.23:0,75,920	0/0:9,0:9:24.08:0,24,296	0/0:21,0:21:48.15:0,48,595	1/1:5,19:23:48.16:774,48,0	1/1:4,22:25:22.73:897,23,0	0/0:28,0:28:57.14:0,57,706	0/0:18,0:18:45.04:0,45,510	0/0:29,0:28:60.19:0,60,743	0/0:32,0:32:68.49:0,68,837	1/1:17,7:21:27.09:429,27,0	1/1:3,11:13:33.11:497,33,0	1/1:14,52:70:80.97:1322,81,0	1/1:8,13:23:34.36:543,34,0	0/0:24,0:24:60.14:0,60,726	0/0:43,0:44:99:0,99,1192	1/1:8,9:18:27.09:441,27,0	0/0:26,0:26:69.22:0,69,855	1/1:3,12:16:39.13:633,39,0	0/0:9,0:8:21.07:0,21,260
chr10	36974350	.	T	TA	2322.71	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=6.787;DP=500;FS=2.609;HRun=1;HaplotypeScore=68.3818;InbreedingCoeff=0.7166;MQ=72.20;MQ0=1;MQRankSum=-1.057;QD=11.56;ReadPosRankSum=2.109;VQSLOD=2.1746;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:7.16:0,7,146	0/0:1,0:1:0:0,0,0	0/0:16,0:13:22.93:0,23,243	0/0:22,0:18:32.20:0,32,383	0/0:15,0:15:42.07:0,42,464	0/1:25,0:25:10.55:11,0,170	0/0:27,0:27:5.73:0,6,234	1/1:25,0:25:64.48:620,64,0	0/0:22,0:22:50.65:0,51,521	0/0:20,0:20:18.37:0,18,191	0/1:9,0:9:11.73:12,0,14	0/0:18,0:20:50.40:0,50,512	1/1:18,3:21:26.88:287,27,0	1/1:10,0:10:12.02:117,12,0	0/0:16,0:16:9.52:0,10,123	0/0:17,0:17:42.07:0,42,458	0/0:26,0:26:59.26:0,59,704	0/1:22,0:22:4.75:5,0,117	1/1:18,0:18:50.95:477,51,0	1/1:7,8:15:29.97:318,30,0	1/1:17,0:17:9.41:83,9,0	1/1:13,0:13:17.72:171,18,0	0/0:15,0:15:45.06:0,45,506	0/0:33,0:34:74.74:0,75,810	1/1:13,0:13:21.03:207,21,0	0/0:17,0:17:47.93:0,48,528	1/1:13,0:13:24.01:219,24,0	0/0:2,0:2:6.01:0,6,64
chr10	36974351	.	A	AATT	4709.17	PASS	AB=0.611;AC=21;AF=0.375;AN=56;BaseQRankSum=-3.444;DP=530;FS=11.249;HRun=0;HaplotypeScore=84.0680;InbreedingCoeff=0.8689;MQ=71.58;MQ0=1;MQRankSum=-3.772;QD=27.06;ReadPosRankSum=-2.867;VQSLOD=3.7047;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:30:45.83:0,46,349	1/1:1,0:1:3.01:40,3,0	0/0:16,0:13:25.76:0,26,281	0/0:22,0:18:31.02:0,31,436	0/0:17,0:17:41.54:0,42,562	0/0:9,0:27:54.73:0,55,406	0/0:11,0:27:8.01:0,8,452	1/1:4,18:29:79.25:1115,79,0	0/0:21,0:21:53.88:0,54,708	0/0:9,0:25:53.03:0,53,453	0/1:4,0:11:9.06:9,0,36	0/0:18,0:19:50.39:0,50,659	1/1:3,16:21:28.84:511,29,0	1/1:1,7:16:15.05:323,15,0	0/0:4,0:18:26.75:0,27,236	0/0:16,0:17:42:0,42,591	0/0:20,0:24:65.87:0,66,967	0/0:3,0:23:42.59:0,43,360	1/1:0,11:18:53.98:757,54,0	1/1:9,4:15:29.83:412,30,0	1/1:0,15:17:9.42:144,9,0	1/1:2,7:12:25.17:421,25,0	0/0:16,0:16:45.02:0,45,669	0/0:29,0:33:83.35:0,83,1075	1/1:2,4:17:21.07:396,21,0	0/0:16,0:18:50.89:0,51,716	1/1:2,10:17:30.06:580,30,0	0/0:1,0:2:6.02:0,6,93
chr10	36974613	.	AGAGG	A	1765.24	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=7.008;DP=306;FS=1.390;HRun=0;HaplotypeScore=52.0489;InbreedingCoeff=0.8562;MQ=55.51;MQ0=9;MQRankSum=-7.408;QD=22.63;ReadPosRankSum=-2.535;VQSLOD=2.9540;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:42.14:0,42,1028	1/1:1,0:1:3:27,3,0	0/0:48,0:13:7.60:0,8,91	0/0:54,0:15:12.62:0,13,224	0/0:7,0:7:15.05:0,15,372	0/0:4,0:4:9.03:0,9,213	0/0:11,0:11:30.07:0,30,650	1/1:6,2:8:16.39:160,16,0	0/0:2,0:2:6.02:0,6,151	0/0:9,0:9:24.49:0,24,405	0/0:6,0:6:12.04:0,12,284	0/0:4,0:4:9.02:0,9,178	1/1:3,5:8:18.06:310,18,0	1/1:4,4:8:18.06:305,18,0	0/0:4,0:4:9.02:0,9,175	0/0:5,0:5:15.05:0,15,374	0/0:10,0:10:18.06:0,18,440	0/0:9,0:9:15.05:0,15,379	1/1:4,2:4:6.02:88,6,0	1/1:5,5:9:11.91:170,12,0	1/1:7,8:15:20.86:203,21,0	1/1:3,6:9:20.39:285,20,0	0/0:5,0:5:15.04:0,15,321	0/0:20,0:20:33.08:0,33,727	1/1:3,2:5:8.98:97,9,0	0/0:5,0:5:15.05:0,15,340	1/1:2,6:8:20.96:325,21,0	0/0:3,0:3:9.03:0,9,227
chr10	36974648	.	G	GA	1566.05	PASS	AB=0.786;AC=18;AF=0.333;AN=54;BaseQRankSum=5.758;DP=303;FS=0.000;HRun=0;HaplotypeScore=59.6411;InbreedingCoeff=0.7369;MQ=65.10;MQ0=7;MQRankSum=-5.072;QD=12.84;ReadPosRankSum=-0.293;VQSLOD=4.1150;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:25:63.11:0,63,801	./.	0/0:49,0:15:6.77:0,7,311	0/1:58,0:18:1.18:1,0,207	0/0:7,0:7:21.06:0,21,276	0/0:5,0:4:9.03:0,9,125	0/0:14,0:14:36.05:0,36,476	1/1:2,7:8:18.03:246,18,0	0/0:3,0:3:8.93:0,9,83	0/0:5,0:5:12.03:0,12,139	0/0:2,0:2:3.01:0,3,42	0/0:8,0:8:24.02:0,24,281	1/1:2,4:6:18:216,18,0	1/1:0,7:7:21:285,21,0	0/0:7,0:7:20.91:0,21,192	0/0:8,0:8:21.07:0,21,293	0/0:8,0:8:18.02:0,18,216	0/0:4,0:4:9.03:0,9,125	0/1:2,6:8:26.89:140,0,27	1/1:2,1:3:5.98:64,6,0	1/1:3,4:7:6.01:70,6,0	1/1:3,5:7:11.99:153,12,0	0/0:8,0:8:18.02:0,18,229	0/0:17,0:17:41.93:0,42,521	1/1:0,9:9:21.07:312,21,0	0/0:5,0:5:12.04:0,12,167	1/1:0,7:7:18.06:268,18,0	0/0:4,0:4:12.03:0,12,150
chr10	36974681	.	AAGAGGG	A	5390.36	PASS	AC=36;AF=0.692;AN=52;BaseQRankSum=6.911;DP=324;FS=11.499;HRun=0;HaplotypeScore=78.8065;InbreedingCoeff=0.8331;MQ=53.31;MQ0=10;MQRankSum=-7.339;QD=27.50;ReadPosRankSum=1.267;VQSLOD=3.1896;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,13:27:3.59:476,4,0	./.	0/0:36,0:11:17.96:0,18,305	0/0:36,0:9:8.83:0,9,200	0/0:5,0:5:12.04:0,12,309	1/1:1,8:9:18.06:375,18,0	1/1:6,7:13:12.04:254,12,0	1/1:8,12:20:33.01:537,33,0	0/0:8,0:8:21.07:0,21,638	1/1:3,6:9:15.04:276,15,0	1/1:0,4:4:6.02:127,6,0	1/1:2,7:9:15.05:317,15,0	1/1:4,8:12:27.08:504,27,0	1/1:4,8:12:27.01:484,27,0	1/1:2,8:10:21.07:444,21,0	0/0:10,0:10:27.08:0,27,757	0/0:13,0:12:33.11:0,33,1075	1/1:2,5:7:12.04:247,12,0	./.	1/1:1,3:4:6.02:126,6,0	1/1:11,1:9:3.01:63,3,0	1/1:4,4:8:11.99:209,12,0	1/1:4,4:8:12.04:254,12,0	1/1:6,13:16:5.54:126,6,0	1/1:3,3:6:12.04:254,12,0	0/0:10,0:10:24.08:0,24,759	1/1:2,5:7:15.05:317,15,0	0/0:6,0:6:12.04:0,12,368
chr10	36974747	.	A	AATT	8099.95	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=6.683;DP=428;FS=0.000;HRun=0;HaplotypeScore=80.8881;InbreedingCoeff=0.9928;MQ=79.62;MQ0=0;MQRankSum=-8.001;QD=60.45;ReadPosRankSum=-0.624;VQSLOD=6.3505;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:78.21:0,78,1244	1/1:0,5:5:15.05:339,15,0	0/0:24,0:24:57.18:0,57,901	0/0:21,0:21:51.14:0,51,761	0/0:13,0:13:39.13:0,39,650	0/0:15,0:15:39.13:0,39,650	0/0:23,0:23:54.18:0,54,897	1/1:9,14:23:63.20:1284,63,0	0/0:9,0:9:27.09:0,27,450	0/0:22,0:22:66.23:0,66,1092	0/0:10,0:10:24.08:0,24,400	0/0:14,0:14:33.11:0,33,549	1/1:0,13:13:39.13:883,39,0	1/1:0,12:12:33.11:746,33,0	0/0:16,0:16:42.14:0,42,697	0/0:13,0:13:36.12:0,36,600	0/0:27,0:27:78.25:0,78,1273	0/0:10,0:10:27.09:0,27,450	1/1:1,10:11:27.09:612,27,0	1/1:0,12:14:36.09:767,36,0	1/1:1,14:15:39.13:883,39,0	1/1:2,15:17:48.16:1073,48,0	0/0:10,0:10:30.10:0,30,500	0/0:14,0:14:27.09:0,27,450	1/1:1,4:6:14.87:326,15,0	0/0:14,0:14:39.12:0,39,627	1/1:1,16:18:54.18:1188,54,0	0/0:6,0:6:18.06:0,18,300
chr10	36975963	.	C	CA	349.84	PASS	AB=0.667;AC=27;AF=0.964;AN=28;BaseQRankSum=-1.734;DP=51;FS=0.000;HRun=1;HaplotypeScore=13.9145;InbreedingCoeff=-0.1509;MQ=54.03;MQ0=0;MQRankSum=-1.734;QD=10.00;ReadPosRankSum=0.083;VQSLOD=0.9786;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	0/1:1,0:2:0.38:14,0,0	1/1:2,0:2:5.96:43,6,0	./.	./.	./.	1/1:3,1:4:2.99:23,3,0	./.	1/1:1,0:1:3:25,3,0	1/1:4,0:4:2.99:23,3,0	1/1:3,0:3:2.99:24,3,0	./.	./.	1/1:1,2:3:3:25,3,0	./.	1/1:1,1:2:5.95:43,6,0	1/1:1,0:1:3:26,3,0	1/1:1,1:2:2.99:24,3,0	1/1:3,0:3:2.97:20,3,0	./.	1/1:3,1:4:11.88:85,12,0	./.	./.	1/1:0,2:2:5.60:28,6,0	1/1:1,1:2:2.97:20,3,0	./.
chr10	36976094	.	T	TACAC	742.42	PASS	AB=0.990;AC=30;AF=0.652;AN=46;BaseQRankSum=-1.779;DP=268;FS=2.982;HRun=0;HaplotypeScore=203.7611;InbreedingCoeff=0.1119;MQ=28.28;MQ0=2;MQRankSum=-0.532;QD=2.84;ReadPosRankSum=-0.385;VQSLOD=2.1614;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:24:6.32:6,0,17	1/1:2,0:2:0.27:1,0,0	./.	./.	0/1:7,0:7:0:0,0,0	0/1:12,1:12:0.14:0,0,0	1/1:9,0:8:0.45:1,0,0	./.	1/1:21,1:21:6:61,6,0	1/1:25,0:23:19.31:286,19,0	0/1:12,0:11:0.05:0,0,0	1/1:9,0:8:5.67:29,6,0	0/1:3,0:3:0:0,0,0	0/1:1,0:1:0:0,0,0	0/1:30,1:30:0:0,0,0	0/1:22,1:19:5.29:5,0,22	0/1:12,0:12:3.95:78,0,4	0/1:8,0:8:27.13:27,0,28	0/1:6,0:5:11.59:18,0,12	0/1:3,0:3:0:0,0,0	1/1:8,0:7:5.54:26,6,0	./.	1/1:5,0:3:2.88:15,3,0	0/1:9,0:8:0:0,0,0	./.	1/1:23,0:22:6.96:274,7,0	0/1:4,0:4:4.53:9,0,5	0/0:1,0:1:0:0,0,0
chr10	36976096	.	TAC	T	52.56	PASS	AB=1.000;AC=9;AF=0.300;AN=30;BaseQRankSum=2.586;DP=290;FS=1.167;HRun=0;HaplotypeScore=127.4707;InbreedingCoeff=0.1145;MQ=28.70;MQ0=2;MQRankSum=0.277;QD=0.58;ReadPosRankSum=-2.021;VQSLOD=2.3259;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:26:1.02:0,1,74	1/1:3,0:3:4.04:16,4,0	./.	./.	./.	1/1:13,0:12:2.68:11,3,0	0/0:10,0:9:0:0,0,0	0/0:5,0:4:3.01:0,3,45	0/0:23,2:24:3.24:0,3,31	0/1:29,0:27:29.74:30,0,96	0/0:13,0:12:3:0,3,25	0/0:9,0:8:1.81:0,2,4	./.	./.	./.	0/0:24,1:21:8.40:0,8,129	1/1:14,1:15:10.06:39,10,0	0/0:8,0:8:2.13:0,2,130	0/1:6,0:5:4.99:5,0,19	./.	./.	./.	./.	./.	./.	0/1:25,0:24:51.70:52,0,112	0/0:4,0:4:2.22:0,2,7	./.
chr10	36976101	.	A	ATG	269.16	PASS	AB=0.954;AC=11;AF=0.275;AN=40;BaseQRankSum=3.858;DP=375;FS=8.571;HRun=0;HaplotypeScore=177.0028;InbreedingCoeff=-0.0512;MQ=29.77;MQ0=3;MQRankSum=-1.979;QD=1.38;ReadPosRankSum=2.184;VQSLOD=2.0809;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:34,2:36:11.47:11,0,111	0/1:3,0:3:0.83:6,0,1	./.	./.	0/0:15,0:14:6.01:0,6,70	0/1:18,0:17:6.55:8,0,7	0/1:12,1:14:0:0,0,0	0/0:5,0:4:3:0,3,28	0/0:24,4:30:2.91:0,3,131	0/1:34,0:32:99:128,0,125	0/0:15,0:15:6.02:0,6,95	1/1:12,0:12:2.37:8,2,0	0/0:4,0:4:2.74:0,3,12	./.	0/0:28,11:38:3.01:0,3,46	0/0:28,4:28:11.67:0,12,182	0/1:18,0:19:29.91:30,0,90	0/1:13,0:14:8.10:8,0,193	0/0:8,0:6:11.45:0,11,51	./.	0/1:11,0:9:0:0,0,0	0/0:1,0:1:0:0,0,0	./.	./.	./.	0/1:29,1:29:85.65:174,0,86	0/0:4,0:4:2.74:0,3,12	./.
chr10	36976104	.	TACAA	T	609.38	PASS	AB=0.936;AC=15;AF=0.341;AN=44;BaseQRankSum=8.917;DP=395;FS=30.486;HRun=0;HaplotypeScore=183.5557;InbreedingCoeff=0.0535;MQ=30.47;MQ0=3;MQRankSum=-5.822;QD=3.83;ReadPosRankSum=4.717;VQSLOD=1.2651;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:34.88:0,35,347	0/1:2,1:3:5.20:8,0,5	./.	./.	0/0:16,0:15:6.02:0,6,125	0/1:19,0:18:11.82:12,0,62	0/0:17,0:16:3:0,3,25	1/1:6,0:4:0.47:1,0,0	0/0:33,0:32:20.60:0,21,327	0/1:37,0:35:99:196,0,208	0/0:17,0:16:10.78:0,11,185	1/1:13,0:12:4.04:12,4,0	1/1:3,1:4:2.99:24,3,0	./.	0/0:43,0:42:15.75:0,16,184	0/0:33,0:29:23.53:0,24,368	0/1:20,0:20:66.54:67,0,197	0/1:14,0:14:29.19:29,0,230	0/1:6,1:6:28.55:48,0,29	./.	0/0:11,1:10:0:0,0,0	0/0:1,0:1:0:0,0,0	./.	0/0:9,0:8:2.94:0,3,18	./.	0/1:31,0:30:15.15:287,0,15	1/1:0,4:4:2.98:53,3,0	0/0:3,0:3:5.99:0,6,64
chr10	36976108	.	A	ATATAT	871.93	PASS	AB=0.839;AC=5;AF=0.109;AN=46;BaseQRankSum=4.707;DP=438;FS=30.098;HRun=0;HaplotypeScore=213.4527;InbreedingCoeff=0.1204;MQ=30.77;MQ0=4;MQRankSum=-2.277;QD=7.86;ReadPosRankSum=6.149;VQSLOD=1.2377;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:39,2:37:42.03:0,42,449	0/0:3,0:3:0.73:0,1,11	./.	./.	0/0:14,5:17:6.02:0,6,140	0/1:18,2:20:46.15:46,0,124	0/0:15,2:16:2.34:0,2,44	0/0:6,0:4:2.37:0,2,8	0/0:35,4:37:32.09:0,32,471	0/1:33,7:38:99:347,0,417	0/0:15,2:16:9.85:0,10,159	1/1:12,4:14:2.74:20,3,0	0/0:5,0:5:4.25:0,4,33	0/0:3,0:3:0.49:0,0,2	0/0:41,6:46:16.91:0,17,192	0/0:31,4:31:29.31:0,29,423	0/0:22,2:24:32.02:0,32,377	0/0:16,1:18:30.43:0,30,345	0/0:7,0:6:10.86:0,11,71	./.	0/0:9,0:10:0.47:0,0,1	0/0:2,0:2:1.25:0,1,3	./.	0/0:11,0:10:3.18:0,3,20	./.	0/1:25,9:33:99:560,0,207	0/0:4,0:4:2.50:0,2,10	0/0:3,0:3:6.02:0,6,84
chr10	36976111	.	A	ATG	247.73	PASS	AB=0.987;AC=10;AF=0.217;AN=46;BaseQRankSum=5.758;DP=476;FS=14.169;HRun=0;HaplotypeScore=227.8219;InbreedingCoeff=0.1198;MQ=31.00;MQ0=4;MQRankSum=-4.008;QD=1.88;ReadPosRankSum=5.948;VQSLOD=0.9590;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,2:36:32.12:0,32,475	0/1:3,0:3:1.45:1,0,2	./.	./.	0/0:23,0:21:6.02:0,6,98	0/0:23,0:22:15.73:0,16,205	0/0:17,2:17:3.01:0,3,48	0/0:7,0:5:5.36:0,5,32	0/0:42,3:43:29.68:0,30,522	0/1:43,0:41:99:202,0,332	0/0:18,1:18:9:0,9,120	0/1:18,1:17:2.96:3,0,18	0/0:5,0:5:2.69:0,3,11	1/1:3,0:3:0.47:1,0,0	0/0:49,0:48:16.20:0,16,182	0/0:37,0:33:29.65:0,30,458	0/0:24,1:25:31.90:0,32,424	0/0:19,1:20:34.72:0,35,369	0/1:9,0:7:1.73:2,0,39	./.	0/1:15,0:11:0:0,0,0	1/1:2,0:2:0.34:0,0,0	./.	0/0:10,1:10:4.81:0,5,29	./.	0/1:37,1:37:99:127,0,187	0/0:4,0:4:2.68:0,3,11	0/0:4,0:4:6.49:0,6,99
chr10	36976114	.	C	CAT	740.50	PASS	AB=0.924;AC=8;AF=0.190;AN=42;BaseQRankSum=6.426;DP=484;FS=31.322;HRun=0;HaplotypeScore=224.0701;InbreedingCoeff=-0.0139;MQ=31.51;MQ0=5;MQRankSum=-3.212;QD=4.49;ReadPosRankSum=5.505;VQSLOD=1.2922;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,2:38:29.53:0,30,388	1/1:3,0:3:1.68:5,2,0	./.	./.	0/0:22,2:22:6.02:0,6,92	0/0:17,6:22:17.95:0,18,189	0/0:17,2:17:3.01:0,3,44	0/0:7,0:5:2.29:0,2,6	0/0:40,5:43:0.05:0,0,433	0/1:37,7:42:99:433,0,284	0/0:13,5:17:9:0,9,113	0/1:17,2:17:3:3,0,12	0/0:5,0:5:2.74:0,3,12	./.	0/0:44,8:51:24.55:0,25,206	0/0:36,3:35:31.08:0,31,405	0/1:22,3:25:4.61:5,0,345	0/1:20,0:20:20.42:20,0,206	0/0:8,0:6:9.43:0,9,34	./.	0/1:16,0:11:0:0,0,0	./.	./.	0/0:9,2:10:3.74:0,4,26	./.	0/1:33,5:37:99:374,0,197	0/0:4,0:4:2.22:0,2,7	0/0:3,1:4:6.49:0,6,93
chr10	36976125	.	A	ATG	434.34	PASS	AB=0.925;AC=9;AF=0.205;AN=44;BaseQRankSum=8.301;DP=578;FS=6.465;HRun=0;HaplotypeScore=259.6353;InbreedingCoeff=0.0656;MQ=32.05;MQ0=30;MQRankSum=-6.543;QD=2.55;ReadPosRankSum=2.958;VQSLOD=1.6004;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:45,1:42:26.97:0,27,462	1/1:3,0:3:1.63:5,2,0	./.	./.	0/0:23,3:23:9.03:0,9,137	0/0:29,0:27:1.06:0,1,259	0/0:20,0:18:6.49:0,6,92	0/0:10,0:5:8.43:0,8,64	0/0:51,2:51:46.50:0,47,689	0/1:44,6:45:99:271,0,355	0/0:23,1:22:13.25:0,13,142	0/1:22,3:23:19.87:21,0,20	0/0:5,0:5:2.74:0,3,12	./.	0/0:56,1:55:34.23:0,34,427	0/0:54,0:51:38.19:0,38,670	0/0:25,2:28:36.65:0,37,547	0/1:19,1:20:19.33:19,0,358	0/0:12,1:7:12.13:0,12,98	./.	0/1:17,0:8:0:0,0,0	0/0:4,0:2:0:0,0,0	./.	0/0:13,0:12:3.02:0,3,24	./.	0/1:37,6:41:99:219,0,285	0/1:4,0:4:0.16:0,0,0	0/1:5,1:5:1.28:1,0,84
chr10	36976128	.	C	CT	782.43	PASS	AB=0.895;AC=10;AF=0.227;AN=44;BaseQRankSum=10.885;DP=637;FS=17.189;HRun=0;HaplotypeScore=255.6407;InbreedingCoeff=-0.0053;MQ=31.87;MQ0=49;MQRankSum=-7.990;QD=3.84;ReadPosRankSum=4.624;VQSLOD=2.0196;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:41:5:0,5,422	0/1:2,1:3:0.39:3,0,0	./.	./.	0/0:32,1:29:15.04:0,15,192	0/0:27,2:27:14.44:0,14,277	0/0:17,0:18:11.97:0,12,123	0/1:14,0:6:20.63:21,0,33	0/0:46,3:52:50.95:0,51,680	0/1:45,4:49:99:435,0,309	0/0:24,2:25:14.70:0,15,163	0/1:25,5:30:6.71:7,0,31	0/0:5,1:6:2.04:0,2,6	./.	0/0:49,3:58:39.43:0,39,445	0/0:51,4:53:63.41:0,63,782	0/0:25,1:28:17.93:0,18,488	0/1:22,0:22:69.78:70,0,293	0/1:16,0:7:29.97:30,0,68	./.	0/0:18,0:8:0.89:0,1,2	0/0:4,0:2:0:0,0,0	./.	0/0:15,0:16:2.20:0,2,24	./.	0/1:43,1:45:99:311,0,348	1/1:5,0:5:2.98:21,3,0	0/1:6,0:5:2.81:3,0,76
chr10	36976132	.	A	ATG	461.93	PASS	AB=0.988;AC=11;AF=0.229;AN=48;BaseQRankSum=7.923;DP=704;FS=3.295;HRun=0;HaplotypeScore=280.3589;InbreedingCoeff=0.2744;MQ=31.57;MQ0=72;MQRankSum=-5.548;QD=2.73;ReadPosRankSum=4.111;VQSLOD=2.3339;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:47,1:42:34.23:0,34,613	1/1:4,0:4:1.63:5,2,0	./.	./.	0/0:37,0:31:15.05:0,15,245	0/0:30,0:29:9.75:0,10,432	0/0:22,0:20:14.78:0,15,204	0/0:17,0:7:11.44:0,11,113	0/0:57,0:54:53.87:0,54,813	0/1:61,1:53:99:277,0,615	0/0:30,0:28:21.04:0,21,288	0/0:32,0:30:2.04:0,2,6	0/0:8,0:8:5.26:0,5,21	1/1:11,0:5:0.47:1,0,0	0/0:62,0:60:42.90:0,43,566	0/0:61,1:57:71.99:0,72,1065	0/0:30,0:30:26.64:0,27,639	0/0:24,0:23:50.94:0,51,602	0/1:23,0:7:11.44:11,0,85	1/1:11,0:5:0.47:1,0,0	0/0:21,0:8:3.01:0,3,31	0/0:6,0:4:0.12:0,0,0	./.	0/0:19,1:18:3.14:0,3,25	./.	0/1:51,1:45:99:247,0,602	1/1:5,1:6:2.84:28,3,0	0/0:9,0:6:12.94:0,13,134
chr10	36976134	.	A	ATG	77.78	PASS	AB=0.976;AC=7;AF=0.167;AN=42;BaseQRankSum=6.992;DP=723;FS=0.000;HRun=0;HaplotypeScore=270.7285;InbreedingCoeff=0.1709;MQ=31.62;MQ0=82;MQRankSum=-3.684;QD=0.52;ReadPosRankSum=0.875;VQSLOD=1.9364;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,1:44:42.56:0,43,640	1/1:3,1:4:1.63:5,2,0	./.	./.	0/0:36,0:30:15.05:0,15,245	0/0:32,0:29:20.36:0,20,463	0/0:23,0:21:15.51:0,16,219	0/0:17,0:7:11.62:0,12,114	0/0:56,1:54:54.41:0,54,816	0/1:60,1:52:62.20:62,0,669	0/0:32,0:29:21.04:0,21,290	0/0:32,0:30:2.61:0,3,11	0/0:7,1:8:2.74:0,3,12	./.	0/0:64,0:62:42.49:0,42,587	0/0:61,0:57:71.95:0,72,1078	0/0:32,2:32:47.20:0,47,721	0/0:24,0:23:59.91:0,60,657	0/1:24,1:7:44.09:44,0,63	./.	0/0:25,0:9:5.88:0,6,66	./.	./.	0/0:19,0:18:3.11:0,3,24	./.	0/1:53,1:47:58.30:58,0,639	1/1:3,3:6:2.71:15,3,0	0/0:9,0:6:6.84:0,7,147
chr10	36976139	.	A	ATG	149.57	PASS	AB=0.988;AC=5;AF=0.114;AN=44;BaseQRankSum=7.222;DP=841;FS=9.989;HRun=0;HaplotypeScore=284.1648;InbreedingCoeff=0.1324;MQ=32.81;MQ0=97;MQRankSum=-4.812;QD=0.96;ReadPosRankSum=-0.261;VQSLOD=0.9124;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:46:45.93:0,46,751	1/1:4,0:4:1.32:4,1,0	./.	0/0:9,0:2:3.01:0,3,42	0/0:44,1:38:17.97:0,18,287	0/0:40,0:36:39.72:0,40,636	0/0:24,0:22:23.97:0,24,327	0/0:25,0:11:17.71:0,18,201	0/0:60,0:57:60.57:0,61,911	0/1:76,2:66:99:137,0,1171	0/0:42,0:38:24.03:0,24,339	0/0:38,1:37:2.50:0,3,10	0/1:9,0:9:0.38:0,0,4	./.	0/0:66,1:65:46.13:0,46,657	0/0:67,1:63:79.16:0,79,1157	0/0:39,0:37:63.23:0,63,876	0/0:26,0:25:53.40:0,53,704	0/0:27,0:6:5.23:0,5,18	./.	0/0:26,0:9:6.02:0,6,81	./.	./.	0/0:22,0:20:6.16:0,6,63	./.	0/1:64,0:54:97.32:97,0,896	0/0:8,0:8:4.96:0,5,19	0/0:12,0:9:16.18:0,16,180
chr10	36976141	.	A	ATG	176.04	PASS	AB=0.979;AC=6;AF=0.136;AN=44;BaseQRankSum=8.639;DP=886;FS=9.456;HRun=0;HaplotypeScore=292.6932;InbreedingCoeff=-0.0170;MQ=32.62;MQ0=101;MQRankSum=-6.160;QD=0.79;ReadPosRankSum=0.908;VQSLOD=0.8808;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:51,4:47:48.41:0,48,802	1/1:4,0:4:1.32:4,1,0	./.	0/0:14,0:2:3.01:0,3,41	0/0:45,0:38:20.98:0,21,335	0/0:40,0:36:39.37:0,39,637	0/0:27,2:27:26.68:0,27,381	0/0:26,0:12:17.71:0,18,220	0/0:58,3:57:60.78:0,61,911	0/1:84,1:71:93.12:93,0,1353	0/0:48,1:45:27.08:0,27,403	0/0:39,1:38:2.90:0,3,26	0/0:10,1:11:0.24:0,0,22	./.	0/0:69,0:67:47.13:0,47,696	0/0:69,0:64:71.78:0,72,1177	0/1:38,1:37:11.68:12,0,810	0/0:25,1:25:60.46:0,60,778	0/1:28,1:6:15.20:78,0,15	./.	0/0:26,0:9:6.02:0,6,85	./.	./.	0/0:22,1:21:6.51:0,7,85	./.	0/1:66,1:56:92.94:93,0,963	0/0:8,1:9:3.63:0,4,14	0/0:12,0:9:20.23:0,20,204
chr10	36976153	.	A	ATG	412.60	PASS	AB=0.983;AC=5;AF=0.109;AN=46;BaseQRankSum=9.794;DP=1031;FS=18.222;HRun=0;HaplotypeScore=323.0694;InbreedingCoeff=0.0579;MQ=32.69;MQ0=120;MQRankSum=-7.266;QD=1.87;ReadPosRankSum=-0.895;VQSLOD=0.3750;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:58,1:50:58.06:0,58,897	1/1:4,0:4:2.04:6,2,0	0/0:22,0:4:5.61:0,6,55	0/0:30,0:6:8.50:0,8,176	0/0:55,0:48:29.92:0,30,483	0/0:42,0:38:47.85:0,48,754	0/0:32,1:30:30.03:0,30,438	0/0:34,0:17:36.03:0,36,499	0/0:65,1:62:72.58:0,73,1230	0/1:99,4:86:99:339,0,1738	0/0:52,3:51:29.22:0,29,472	0/0:42,2:43:5.93:0,6,44	0/0:9,2:11:0.69:0,1,15	./.	0/0:75,0:72:60.39:0,60,881	0/0:72,0:67:54.72:0,55,1238	0/0:37,2:36:15.38:0,15,869	0/0:31,0:30:23.96:0,24,828	0/1:36,0:8:18.34:18,0,43	./.	0/0:34,0:13:6.02:0,6,80	./.	./.	0/0:23,1:22:6:0,6,97	./.	0/1:77,1:64:99:150,0,1256	0/0:10,0:10:7.04:0,7,28	0/0:15,0:13:19.04:0,19,255
chr10	36976160	.	A	ATG	2083.86	PASS	AB=0.822;AC=8;AF=0.160;AN=50;BaseQRankSum=12.258;DP=1094;FS=9.294;HRun=0;HaplotypeScore=318.4529;InbreedingCoeff=0.0626;MQ=32.87;MQ0=110;MQRankSum=-8.822;QD=6.55;ReadPosRankSum=1.073;VQSLOD=2.0341;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:54,3:51:54.73:0,55,808	1/1:5,0:5:2.51:6,3,0	0/0:30,0:4:8.97:0,9,106	0/0:38,0:8:19.31:0,19,283	0/0:42,16:54:29.92:0,30,489	0/0:39,8:42:52.40:0,52,734	0/0:32,2:30:32.58:0,33,473	0/0:36,0:22:44.95:0,45,588	0/0:48,20:64:41.59:0,42,1183	0/1:90,25:99:99:1238,0,1714	0/0:38,13:47:27.09:0,27,441	0/1:20,26:45:30:30,0,43	0/0:17,0:17:11.40:0,11,74	./.	0/0:52,14:63:62.08:0,62,820	0/0:56,14:65:54.76:0,55,1320	0/0:38,1:36:9.79:0,10,840	0/1:27,5:31:75.67:76,0,922	0/0:31,0:6:3.01:0,3,49	0/1:18,0:12:0.07:0,0,0	0/0:31,0:14:3.01:0,3,37	./.	0/0:11,7:16:0.47:0,0,1	0/0:18,7:24:2.15:0,2,46	./.	0/1:65,16:69:99:692,0,1306	0/0:16,0:16:13.67:0,14,75	0/1:14,5:16:99:158,0,260
chr10	36976162	.	A	ATG	2488.86	PASS	AB=0.954;AC=11;AF=0.220;AN=50;BaseQRankSum=13.142;DP=1138;FS=2.459;HRun=0;HaplotypeScore=323.0104;InbreedingCoeff=-0.0461;MQ=32.89;MQ0=114;MQRankSum=-10.235;QD=6.24;ReadPosRankSum=1.483;VQSLOD=2.7555;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:58,1:52:53.68:0,54,813	1/1:5,0:5:2.51:6,3,0	0/0:37,0:5:8.88:0,9,120	0/0:41,0:8:19.31:0,19,297	0/0:59,4:58:32.14:0,32,497	0/0:46,2:43:52.57:0,53,741	0/0:33,0:31:32.58:0,33,472	0/0:35,0:21:34.89:0,35,502	0/0:74,0:68:38.19:0,38,1201	0/1:116,1:102:99:1434,0,1735	0/0:47,3:48:27.09:0,27,438	0/1:47,2:48:29.87:30,0,42	0/1:16,1:17:5.71:6,0,7	./.	0/0:66,2:64:65.08:0,65,841	0/0:71,2:67:53.79:0,54,1337	0/1:37,2:36:12.41:12,0,793	0/1:34,0:32:98.45:98,0,954	0/0:30,0:7:5.69:0,6,60	0/1:15,1:12:0.07:0,0,0	0/0:29,0:14:3.01:0,3,37	./.	0/0:21,0:20:2.69:0,3,8	0/0:29,0:26:2.99:0,3,48	./.	0/1:80,3:71:99:862,0,1269	0/1:16,0:16:10.36:10,0,11	0/1:15,3:16:99:156,0,309
chr10	36976164	.	A	ATG	400.67	PASS	AB=0.986;AC=11;AF=0.212;AN=52;BaseQRankSum=12.213;DP=1139;FS=2.834;HRun=0;HaplotypeScore=334.4348;InbreedingCoeff=0.0692;MQ=33.11;MQ0=111;MQRankSum=-7.656;QD=1.05;ReadPosRankSum=2.004;VQSLOD=1.8494;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:56,1:52:51.77:0,52,796	1/1:4,1:5:2.51:6,3,0	0/1:38,0:5:5.68:6,0,131	0/0:41,0:8:19.31:0,19,296	0/0:63,0:58:32.29:0,32,497	0/0:48,0:44:52.59:0,53,746	0/0:35,0:31:33.02:0,33,467	0/0:34,0:20:25.07:0,25,573	0/0:73,0:68:75.05:0,75,1248	0/1:118,0:103:99:262,0,1930	0/0:53,0:48:27.09:0,27,435	0/1:51,0:48:5.92:6,0,42	0/1:16,1:17:6.38:7,0,6	./.	0/0:68,0:64:68.06:0,68,885	0/0:74,1:68:86.36:0,86,1357	0/0:36,0:36:27.70:0,28,794	0/0:32,1:32:16.90:0,17,980	0/0:27,0:7:6.01:0,6,75	0/1:17,0:12:0.08:0,0,0	0/0:30,0:14:3.01:0,3,37	0/1:14,0:9:0:0,0,0	0/0:22,0:20:2.22:0,2,7	0/0:29,1:26:4.54:0,5,53	./.	0/1:83,1:74:99:193,0,1394	0/1:14,1:16:4.66:5,0,19	0/1:19,0:16:31.51:32,0,323
chr10	36976166	.	AC	A	2970.39	PASS	AB=0.773;AC=19;AF=0.380;AN=50;BaseQRankSum=14.438;DP=1143;FS=0.000;HRun=2;HaplotypeScore=305.0813;InbreedingCoeff=0.0376;MQ=33.53;MQ0=107;MQRankSum=-9.423;QD=4.89;ReadPosRankSum=-0.769;VQSLOD=-0.4485;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,13:54:21.79:0,22,444	1/1:3,2:5:0.89:2,1,0	0/0:42,0:6:17.92:0,18,210	0/0:45,0:9:25.26:0,25,315	0/1:37,25:59:2.30:2,0,452	0/0:41,11:47:5.44:0,5,499	0/0:26,7:30:32.73:0,33,423	0/0:32,1:19:39.13:0,39,571	0/0:50,25:70:44.03:0,44,1044	0/1:74,42:102:99:1310,0,1615	0/0:37,16:49:27.55:0,28,401	0/1:15,36:48:35.81:46,0,36	1/1:7,9:16:10.29:98,10,0	./.	0/0:55,16:67:58.45:0,58,729	0/1:56,19:69:23.40:23,0,876	0/1:30,6:34:99:122,0,626	0/1:23,11:32:99:195,0,764	0/1:25,0:7:30.61:31,0,39	0/1:14,2:11:0:0,0,0	0/0:23,5:14:0.47:0,0,1	./.	1/1:6,16:20:3.48:38,3,0	0/1:10,18:25:14.56:32,0,15	./.	0/1:60,27:76:99:857,0,1325	1/1:8,6:14:22.12:224,22,0	0/1:14,5:16:99:141,0,272
chr10	36976167	.	C	CA	3847.45	PASS	AB=0.898;AC=19;AF=0.380;AN=50;BaseQRankSum=14.066;DP=1188;FS=0.000;HRun=1;HaplotypeScore=316.0875;InbreedingCoeff=-0.0294;MQ=33.65;MQ0=105;MQRankSum=-9.082;QD=5.79;ReadPosRankSum=-0.792;VQSLOD=-0.4015;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:56,5:55:19.54:0,20,388	1/1:3,2:5:2.18:6,2,0	0/0:44,0:7:17.92:0,18,211	0/0:47,0:10:25.26:0,25,297	0/1:55,8:61:2.61:3,0,421	0/1:39,6:48:10.56:11,0,460	0/0:36,3:36:32.65:0,33,395	0/0:35,1:21:39.13:0,39,533	0/0:67,3:69:26.41:0,26,965	0/1:115,5:109:99:1580,0,1493	0/0:49,4:50:27.09:0,27,373	0/1:43,4:50:28.92:61,0,29	1/1:10,6:17:4.39:128,4,0	./.	0/0:65,2:67:58.33:0,58,686	0/1:66,3:68:42.14:42,0,815	0/1:36,2:34:99:122,0,586	0/1:33,2:33:99:208,0,718	0/1:25,0:7:30.61:31,0,36	0/0:10,8:14:0.47:0,0,1	0/0:31,0:15:0.47:0,0,1	./.	1/1:19,3:20:2.87:38,3,0	0/1:24,4:25:14.33:32,0,14	./.	0/1:83,7:80:99:1159,0,1235	1/1:10,6:17:13.21:251,13,0	0/1:15,3:16:99:177,0,249
chr10	36976172	.	C	CATAT	515.58	PASS	AB=0.994;AC=8;AF=0.160;AN=50;BaseQRankSum=10.404;DP=1316;FS=15.939;HRun=0;HaplotypeScore=432.0913;InbreedingCoeff=0.1773;MQ=34.01;MQ0=94;MQRankSum=-7.199;QD=1.58;ReadPosRankSum=-0.230;VQSLOD=0.0506;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:65,0:59:22.60:0,23,581	1/1:7,0:7:2.17:5,2,0	0/0:45,0:7:20.74:0,21,330	0/0:56,0:11:30.10:0,30,559	0/0:73,1:71:44.47:0,44,791	0/0:52,7:55:34.41:0,34,853	0/0:43,0:40:34.97:0,35,641	0/0:39,0:21:39.10:0,39,740	0/0:78,5:77:66.67:0,67,1609	0/1:139,2:127:99:229,0,3635	0/0:54,4:51:29.98:0,30,588	0/0:50,5:54:7.15:0,7,109	0/0:18,0:18:0.89:0,1,41	./.	0/0:78,4:78:63.90:0,64,1080	0/0:73,4:72:73.74:0,74,1304	0/0:38,0:36:44.34:0,44,1066	0/0:37,0:35:36.57:0,37,1306	0/0:23,0:7:5.38:0,5,64	1/1:25,0:19:0.45:1,0,0	./.	./.	0/0:34,0:32:17.26:0,17,91	0/1:34,0:30:4.71:5,0,92	0/0:14,0:12:0:0,0,0	0/1:98,1:90:99:286,0,2651	0/1:20,0:20:14.88:94,0,15	0/0:19,0:17:42.22:0,42,572
chr10	36976188	.	C	CTCAT	1147.63	PASS	AB=0.974;AC=7;AF=0.130;AN=54;BaseQRankSum=8.878;DP=1454;FS=7.175;HRun=0;HaplotypeScore=484.5533;InbreedingCoeff=0.4150;MQ=35.74;MQ0=43;MQRankSum=-8.035;QD=3.37;ReadPosRankSum=-0.789;VQSLOD=0.2640;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:62,3:61:36.78:0,37,863	0/0:8,0:8:0.31:0,0,1	0/0:53,0:9:24.08:0,24,450	0/0:67,0:12:33.11:0,33,645	0/0:71,8:78:68.23:0,68,1333	0/0:62,5:64:52.74:0,53,1336	0/0:47,4:49:60.04:0,60,984	0/0:41,0:28:56.92:0,57,758	0/0:88,3:87:47.35:0,47,2053	0/1:156,5:150:99:669,0,6758	0/0:57,2:55:36.01:0,36,754	0/0:61,3:62:24.13:0,24,407	0/0:17,0:17:12.04:0,12,194	./.	0/0:93,0:90:76.81:0,77,1488	0/0:81,1:81:95.89:0,96,1761	0/0:48,0:46:78.18:0,78,1479	0/0:39,1:39:44.01:0,44,1578	0/0:9,0:1:3.01:0,3,51	0/1:35,0:32:0.92:2,0,1	1/1:17,0:12:2.49:9,2,0	0/0:33,0:30:0:0,0,1	0/0:36,3:39:14.84:0,15,264	0/0:40,0:38:23.43:0,23,480	1/1:26,0:26:3.36:10,3,0	0/1:95,5:97:99:562,0,4188	0/0:24,0:24:13.47:0,13,438	0/0:27,0:27:42.43:0,42,1338
chr10	36976196	.	TGCAC	T	390.74	PASS	AB=0.983;AC=7;AF=0.130;AN=54;BaseQRankSum=7.032;DP=1455;FS=1.498;HRun=0;HaplotypeScore=474.6722;InbreedingCoeff=0.1762;MQ=36.25;MQ0=40;MQRankSum=-6.945;QD=1.04;ReadPosRankSum=0.154;VQSLOD=0.1854;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:62,1:59:46.18:0,46,1264	1/1:7,1:8:0.04:0,0,0	0/0:57,0:15:23.99:0,24,598	0/0:64,0:15:41.46:0,41,765	0/0:81,0:81:72.19:0,72,1526	0/0:66,2:64:67.77:0,68,1685	0/0:52,0:48:59.45:0,59,1494	0/0:40,0:28:34.56:0,35,665	0/0:92,1:89:99:0,106,2635	0/1:150,8:148:99:235,0,8159	0/0:56,2:55:38.78:0,39,903	0/0:67,0:65:26.42:0,26,465	0/0:16,0:16:5.89:0,6,122	./.	0/0:96,0:91:87.33:0,87,2224	0/0:80,1:79:89.31:0,89,2207	0/0:45,0:45:75.60:0,76,1889	0/1:40,0:38:35.63:36,0,1841	0/0:7,0:1:2.99:0,3,23	0/1:36,0:34:0.08:2,0,0	0/0:12,0:9:2.74:0,3,12	0/1:32,0:30:0.45:0,0,0	0/0:33,7:40:16.79:0,17,280	0/0:44,0:42:33.01:0,33,602	0/0:26,0:26:2.23:0,2,16	0/1:97,4:97:99:217,0,5103	0/0:24,0:24:31.24:0,31,569	0/0:29,0:29:75.12:0,75,1665
chr10	36976202	.	C	CAT	449.45	PASS	AB=0.974;AC=8;AF=0.148;AN=54;BaseQRankSum=10.206;DP=1452;FS=11.794;HRun=0;HaplotypeScore=451.3590;InbreedingCoeff=0.3935;MQ=36.71;MQ0=35;MQRankSum=-7.238;QD=1.27;ReadPosRankSum=1.468;VQSLOD=0.2637;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:59,3:58:53.96:0,54,705	0/1:9,0:9:0.02:0,0,1	0/0:57,0:13:32.98:0,33,411	0/0:56,0:14:30.09:0,30,404	0/0:71,9:80:68.78:0,69,967	0/0:59,8:63:67.39:0,67,887	0/0:50,3:49:60.10:0,60,779	0/0:34,0:26:8.51:0,9,325	0/0:88,2:86:47.61:0,48,1248	0/1:153,7:151:99:336,0,4178	0/0:56,2:55:41.70:0,42,543	0/0:64,2:64:24.42:0,24,341	0/0:16,0:16:1.69:0,2,84	./.	0/0:93,0:88:92.99:0,93,1195	0/0:77,1:76:89.83:0,90,1265	0/0:42,0:41:72.01:0,72,952	0/0:44,0:42:81.74:0,82,1046	0/0:7,0:1:2.97:0,3,20	0/1:36,0:34:0.39:0,0,2	1/1:13,0:9:2.68:11,3,0	0/0:33,0:31:0.07:0,0,1	0/0:35,9:44:23.93:0,24,278	0/0:47,0:43:32.53:0,33,470	1/1:29,0:29:5.42:34,5,0	0/1:99,6:102:99:179,0,2806	0/0:24,0:24:24.42:0,24,402	0/0:31,1:32:27.81:0,28,901
chr10	36976204	.	T	TACAC	1090.55	PASS	AB=0.972;AC=14;AF=0.259;AN=54;BaseQRankSum=10.975;DP=1445;FS=6.473;HRun=0;HaplotypeScore=477.0386;InbreedingCoeff=0.2742;MQ=36.78;MQ0=35;MQRankSum=-10.669;QD=2.38;ReadPosRankSum=-2.407;VQSLOD=-0.0425;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:61,0:58:39.60:0,40,824	1/1:9,0:9:2.18:8,2,0	0/0:56,0:13:8.92:0,9,352	0/0:54,0:13:30.09:0,30,508	0/0:74,6:80:72.18:0,72,1227	0/0:64,2:62:65.65:0,66,1097	0/0:51,3:49:49.21:0,49,886	0/1:31,3:26:99:157,0,249	0/0:84,5:85:96.56:0,97,1609	0/1:150,6:149:99:571,0,4572	0/0:51,6:55:35.04:0,35,572	0/0:52,12:62:22.72:0,23,412	1/1:16,0:16:5.51:27,6,0	./.	0/0:89,2:85:79.64:0,80,1313	0/0:78,2:78:93.23:0,93,1548	0/0:44,0:43:68.32:0,68,1149	0/0:42,1:41:2.82:0,3,1150	0/0:7,0:1:2.37:0,2,8	0/1:36,0:34:1.44:2,0,1	1/1:13,0:9:2.60:10,3,0	0/0:33,0:31:0:0,0,1	0/0:39,6:45:23.96:0,24,314	0/0:41,4:43:23.15:0,23,568	1/1:27,0:29:5.44:33,5,0	0/1:103,2:101:99:220,0,3236	0/1:24,0:24:71.30:71,0,224	0/1:32,0:32:99:134,0,969
chr10	36976211	.	A	AGT	47.22	PASS	AB=0.994;AC=9;AF=0.167;AN=54;BaseQRankSum=5.562;DP=1457;FS=13.264;HRun=0;HaplotypeScore=453.5445;InbreedingCoeff=0.4681;MQ=37.76;MQ0=31;MQRankSum=-4.340;QD=0.28;ReadPosRankSum=-2.869;VQSLOD=0.4146;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:67,1:65:36.01:0,36,931	0/1:9,0:9:0.31:0,0,0	0/0:59,0:14:42.14:0,42,675	0/0:55,0:17:45.15:0,45,712	0/0:78,0:78:77.84:0,78,1266	0/0:68,0:64:64.98:0,65,1232	0/0:57,0:49:75.21:0,75,1191	0/1:31,1:23:15.99:16,0,514	0/0:82,0:79:99:0,120,1872	0/0:155,2:148:99:0,337,6068	0/0:61,1:59:41.73:0,42,660	0/0:60,0:58:23.97:0,24,391	0/1:14,0:14:14.43:14,0,96	./.	0/0:91,0:85:90.20:0,90,1444	0/0:81,0:78:99:0,108,1724	0/0:41,0:40:75.05:0,75,1175	0/0:44,0:41:99:0,102,1613	0/0:8,0:2:6:0,6,73	0/1:36,0:34:0.41:0,0,2	1/1:12,1:9:3.01:44,3,0	0/1:34,0:32:0.25:0,0,1	0/0:48,0:48:30.08:0,30,465	0/0:47,1:44:48.03:0,48,754	1/1:29,2:31:5.71:85,6,0	0/0:115,0:111:99:0,283,4400	0/0:24,0:24:28.65:0,29,508	0/0:31,0:31:79.92:0,80,1282
chr10	36976214	.	TATAC	T	92.85	PASS	AB=0.912;AC=8;AF=0.148;AN=54;BaseQRankSum=7.864;DP=1469;FS=2.453;HRun=0;HaplotypeScore=476.2824;InbreedingCoeff=0.2978;MQ=38.20;MQ0=27;MQRankSum=-6.946;QD=0.51;ReadPosRankSum=-1.206;VQSLOD=0.1134;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:71,0:67:63.28:0,63,1699	0/1:10,0:10:0.14:0,0,0	0/0:59,0:15:44.98:0,45,960	0/0:57,0:19:51.10:0,51,1055	0/0:75,2:77:77.56:0,78,2076	0/0:68,1:65:80.02:0,80,2019	0/0:60,0:51:71.68:0,72,1827	0/1:29,2:23:62.77:63,0,413	0/0:82,1:81:99:0,122,3117	0/0:153,5:151:59.55:0,60,8458	0/0:61,0:59:44.69:0,45,1103	0/0:51,5:58:26.05:0,26,712	1/1:11,1:12:5.79:34,6,0	./.	0/0:90,2:86:89.88:0,90,2408	0/0:78,1:76:99:0,108,2788	0/0:39,1:39:78.02:0,78,1911	0/0:42,0:39:65.70:0,66,2388	0/0:8,0:3:6.02:0,6,126	0/1:33,4:35:0.55:2,0,1	0/0:12,0:9:2.80:0,3,13	0/1:27,7:32:0.73:1,0,1	0/0:50,0:50:38.47:0,38,929	0/0:48,1:45:50.90:0,51,1307	0/0:32,0:32:2.17:0,2,13	0/0:113,2:110:99:0,130,6619	0/1:18,6:24:37.04:37,0,288	0/1:31,0:31:69.17:69,0,1793
chr10	36976312	.	C	CATA	273.58	PASS	AB=0.897;AC=9;AF=0.180;AN=50;BaseQRankSum=7.110;DP=1264;FS=3.241;HRun=0;HaplotypeScore=268.9767;InbreedingCoeff=0.7700;MQ=43.47;MQ0=173;MQRankSum=-6.281;QD=3.91;ReadPosRankSum=0.349;VQSLOD=2.4039;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:84,1:74:99:0,127,3050	1/1:15,3:16:9.03:144,9,0	0/0:27,0:5:9.92:0,10,168	0/0:39,0:9:24.03:0,24,312	0/0:47,0:43:63.52:0,64,1165	0/0:44,0:42:99:0,105,1801	0/0:64,1:54:60.63:0,61,1993	0/0:41,0:11:15.04:0,15,246	0/0:87,0:81:99:0,210,4079	0/0:113,0:85:99:0,193,4095	0/0:44,0:42:71.77:0,72,1276	0/0:70,0:63:99:0,163,2804	1/1:3,0:2:3.01:53,3,0	./.	0/0:73,0:67:99:0,182,3278	0/0:64,1:61:99:0,154,2704	0/0:51,0:47:86.74:0,87,2187	0/0:38,0:36:51.26:0,51,1836	./.	0/1:23,3:24:0.39:1,0,0	./.	0/0:17,3:12:0.12:0,0,1	0/0:42,0:40:59.91:0,60,958	0/0:73,0:67:99:0,125,2594	1/1:17,2:16:8.94:137,9,0	0/0:87,1:63:99:0,137,2983	1/1:2,1:2:3.01:66,3,0	0/0:17,0:16:48.16:0,48,890
chr10	36976317	.	C	CATAT	364.56	PASS	AB=0.871;AC=10;AF=0.200;AN=50;BaseQRankSum=5.941;DP=1254;FS=6.115;HRun=0;HaplotypeScore=267.1015;InbreedingCoeff=0.6846;MQ=43.11;MQ0=150;MQRankSum=-5.247;QD=2.87;ReadPosRankSum=1.257;VQSLOD=1.8567;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:85,0:76:99:0,178,3341	1/1:13,4:16:8.39:185,8,0	0/0:34,0:7:14.96:0,15,231	0/0:45,0:9:27.09:0,27,520	0/0:41,0:36:53.86:0,54,1054	0/0:40,0:38:99:0,99,1872	0/0:59,0:52:99:0,114,2045	0/1:57,0:23:37.71:38,0,311	0/0:84,0:80:99:0,225,4163	0/0:103,0:77:99:0,193,3985	0/0:40,0:38:69.24:0,69,1354	0/0:65,0:60:99:0,160,2859	1/1:4,1:3:3.01:61,3,0	./.	0/0:74,0:67:99:0,170,3054	0/0:64,0:60:99:0,151,2749	0/0:51,0:47:99:0,123,2353	0/0:40,0:37:94.53:0,95,1890	./.	0/1:17,9:24:0.06:1,0,0	./.	0/0:15,6:14:0.41:0,0,1	0/0:43,0:41:55.43:0,55,1041	0/0:77,0:70:99:0,148,2825	1/1:14,4:16:7.51:173,8,0	0/0:82,0:59:99:0,149,2744	1/1:4,0:3:5.60:41,6,0	0/0:17,0:16:48.16:0,48,943
chr10	36976321	.	C	CATA	646.16	PASS	AB=0.864;AC=10;AF=0.200;AN=50;BaseQRankSum=6.938;DP=1232;FS=3.014;HRun=0;HaplotypeScore=237.0923;InbreedingCoeff=0.6960;MQ=43.39;MQ0=129;MQRankSum=-6.757;QD=5.05;ReadPosRankSum=-0.037;VQSLOD=2.2478;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:83,0:76:99:0,173,3135	1/1:10,4:13:9.03:184,9,0	0/0:41,0:8:21.85:0,22,263	0/0:53,0:10:30.08:0,30,448	0/0:39,0:35:54.85:0,55,980	0/0:40,0:38:90.02:0,90,1560	0/0:57,0:48:97.78:0,98,1750	0/1:67,0:32:99:219,0,321	0/0:87,0:83:99:0,145,3462	0/0:95,0:75:99:0,151,3563	0/0:40,0:39:74.92:0,75,1280	0/0:57,0:55:99:0,139,2504	1/1:2,2:3:3.01:69,3,0	./.	0/0:70,0:64:99:0,138,2523	0/0:58,0:54:99:0,135,2394	0/0:48,0:47:99:0,121,2190	0/0:37,1:36:38.15:0,38,1762	./.	0/1:15,9:21:0.20:0,0,0	./.	0/0:16,6:15:0.13:0,0,1	0/0:40,0:38:55.21:0,55,945	0/0:81,0:75:99:0,161,2905	1/1:10,4:12:8.94:186,9,0	0/0:72,1:54:91.63:0,92,2432	1/1:5,0:4:6.02:124,6,0	0/0:19,0:18:54.18:0,54,963
chr10	36976334	.	C	CAT	97.65	PASS	AB=1.000;AC=13;AF=0.241;AN=54;BaseQRankSum=5.031;DP=1197;FS=5.098;HRun=0;HaplotypeScore=198.3415;InbreedingCoeff=0.4217;MQ=43.37;MQ0=105;MQRankSum=0.122;QD=0.40;ReadPosRankSum=-4.135;VQSLOD=1.7282;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:82,0:77:99:0,173,2506	1/1:13,0:13:5.74:46,6,0	0/0:58,0:8:22.27:0,22,271	0/0:77,0:11:33.11:0,33,490	0/1:38,0:34:26.04:26,0,661	0/0:30,0:29:77.54:0,78,1152	0/0:52,2:46:92.02:0,92,1361	0/0:76,0:47:46.67:0,47,756	0/0:82,1:79:99:0,145,2807	0/1:85,0:68:5.75:6,0,2137	0/1:31,0:30:68.01:68,0,550	0/0:55,0:53:99:0,135,1934	1/1:6,0:4:2.84:14,3,0	./.	0/0:62,0:58:99:0,141,2250	0/0:49,0:46:99:0,105,1472	0/0:42,0:40:38.15:0,38,1315	0/0:45,0:42:86.66:0,87,1468	1/1:24,0:3:2.92:17,3,0	0/0:21,0:19:0:0,0,2	0/0:38,1:25:3.01:0,3,46	0/1:21,0:17:0.21:0,0,0	0/0:32,1:31:39.09:0,39,537	0/0:75,2:73:99:0,156,2242	1/1:13,0:12:8.75:57,9,0	0/0:55,0:44:12.99:0,13,1374	0/0:6,0:5:6.02:0,6,90	0/1:16,0:15:0.20:0,0,560
chr10	36976389	.	TGC	T	43.10	PASS	AB=0.807;AC=8;AF=0.143;AN=56;BaseQRankSum=4.201;DP=1099;FS=21.604;HRun=0;HaplotypeScore=144.6424;InbreedingCoeff=0.4898;MQ=46.07;MQ0=44;MQRankSum=-2.881;QD=0.71;ReadPosRankSum=-3.537;VQSLOD=-0.0997;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:62,0:58:99:0,135,2624	1/1:2,1:3:3:25,3,0	0/0:50,1:10:17.15:0,17,350	0/0:75,1:14:32.16:0,32,559	0/0:41,0:41:99:0,105,2114	0/0:34,0:34:72.83:0,73,1644	0/0:47,0:36:90.18:0,90,1765	0/0:98,0:67:99:0,123,2756	0/0:68,0:69:99:0,175,3339	0/0:70,0:68:99:0,179,3779	0/0:24,0:23:51.16:0,51,986	0/0:47,0:47:99:0,115,2262	0/1:5,2:6:0.01:0,0,1	0/1:4,4:8:0:0,0,0	0/0:66,0:65:99:0,175,3443	0/0:35,0:35:96.22:0,96,1860	0/0:39,0:39:97.05:0,97,1858	0/0:39,0:39:81.53:0,82,1739	0/1:12,2:6:72.32:72,0,140	1/1:14,5:19:2.90:49,3,0	0/0:39,3:36:3.86:0,4,63	0/0:21,2:21:3.01:0,3,61	0/0:29,0:29:24.08:0,24,487	0/0:55,0:55:99:0,129,2531	0/1:9,1:10:0.07:0,0,0	0/0:59,0:55:99:0,162,3063	0/0:6,1:7:6.02:0,6,120	0/0:23,0:23:69.20:0,69,1355
chr10	36976391	.	C	CACACAT	309.23	PASS	AB=0.889;AC=11;AF=0.196;AN=56;BaseQRankSum=3.073;DP=1107;FS=20.567;HRun=0;HaplotypeScore=206.7867;InbreedingCoeff=0.3933;MQ=46.09;MQ0=45;MQRankSum=-2.862;QD=1.66;ReadPosRankSum=-2.812;VQSLOD=1.0928;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:61,0:57:99:0,99,1973	1/1:2,1:3:3:25,3,0	0/0:56,0:10:12.04:0,12,209	0/0:75,0:13:18.01:0,18,279	0/0:41,0:41:90.30:0,90,1867	0/0:32,0:33:69.71:0,70,1487	0/0:47,0:36:69.10:0,69,1365	0/1:96,0:66:99:178,0,1058	0/0:70,0:70:99:0,144,2962	0/0:72,0:70:99:0,166,3462	0/0:26,0:25:42.14:0,42,840	0/0:46,0:46:99:0,103,2145	0/1:6,1:6:0.01:0,0,0	0/1:6,2:8:0:0,0,0	0/0:67,0:66:99:0,150,3116	0/0:36,0:36:69.24:0,69,1425	0/0:39,0:39:75.23:0,75,1520	0/0:40,0:39:64.08:0,64,1574	0/1:16,0:7:99:144,0,126	1/1:14,5:19:3.01:49,3,0	0/0:42,0:35:1.20:0,1,3	0/1:15,6:19:0:0,0,0	0/0:31,0:31:21.07:0,21,443	0/0:55,0:55:99:0,111,2323	0/1:7,3:10:0:0,0,0	0/0:60,0:56:99:0,116,2611	0/1:6,0:6:31.77:32,0,58	0/0:24,0:24:63.20:0,63,1315
chr10	36976489	.	CAT	C	1997.90	PASS	AB=0.967;AC=22;AF=0.393;AN=56;BaseQRankSum=12.011;DP=1009;FS=5.264;HRun=0;HaplotypeScore=205.7195;InbreedingCoeff=0.2688;MQ=44.70;MQ0=47;MQRankSum=3.348;QD=3.59;ReadPosRankSum=-0.616;VQSLOD=2.4023;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:42,2:43:49.51:237,50,0	0/1:9,1:10:15.18:47,0,15	0/0:17,1:5:8.93:0,9,99	0/0:31,2:8:16.65:0,17,200	0/0:21,0:21:37.21:0,37,978	1/1:29,0:27:27.84:118,28,0	1/1:42,1:37:40.56:187,41,0	0/1:79,3:51:99:404,0,289	0/0:62,0:61:99:0,175,3214	0/1:61,1:55:99:255,0,112	1/1:25,1:25:18.05:133,18,0	0/0:41,0:42:99:0,120,2121	0/1:23,0:18:23.79:24,0,54	1/1:21,0:20:2.80:16,3,0	1/1:56,1:51:82.16:296,82,0	0/0:45,0:44:99:0,112,2091	0/0:38,0:38:85.07:0,85,1469	0/1:46,0:46:17.72:167,0,18	0/1:24,1:17:82.31:113,0,82	0/1:30,2:24:35.45:35,0,49	0/0:43,2:35:8.72:0,9,105	0/1:18,2:14:13.79:78,0,14	0/0:32,0:32:60.13:0,60,988	0/0:42,1:43:93.23:0,93,1630	0/1:14,0:14:0:0,0,0	0/0:63,0:58:99:0,150,1925	0/1:22,0:20:10.22:74,0,10	0/0:11,0:11:23.60:0,24,302
chr10	36976490	.	A	ACG	5943.02	PASS	AB=0.979;AC=14;AF=0.250;AN=56;BaseQRankSum=5.196;DP=1000;FS=16.247;HRun=0;HaplotypeScore=194.2132;InbreedingCoeff=0.7381;MQ=44.71;MQ0=48;MQRankSum=7.664;QD=18.23;ReadPosRankSum=2.037;VQSLOD=4.0012;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:44,1:44:80.66:972,81,0	0/0:9,0:9:7.50:0,8,40	0/0:16,0:3:9.03:0,9,145	0/0:33,0:7:21.06:0,21,285	0/0:22,0:22:60.18:0,60,949	1/1:26,2:26:56.27:562,56,0	1/1:42,0:37:64.77:780,65,0	0/0:82,0:51:97.94:0,98,705	0/0:62,0:61:99:0,175,2746	1/1:61,2:56:14.45:1196,14,0	1/1:23,2:24:45.02:427,45,0	0/0:42,0:42:99:0,120,1889	0/0:22,0:18:9.57:0,10,59	0/0:22,0:21:0.47:0,0,1	1/1:52,3:50:99:1169,106,0	0/0:45,0:44:99:0,123,1919	0/0:36,0:36:86.24:0,86,1349	0/1:44,2:46:19.60:831,0,20	0/0:24,0:16:33.05:0,33,246	0/0:33,0:25:14.94:0,15,119	0/0:45,0:35:11.94:0,12,137	0/0:20,0:14:14.72:0,15,98	0/0:32,0:31:60.16:0,60,905	0/0:44,0:44:93.12:0,93,1490	0/0:14,0:14:0:0,0,0	0/0:60,0:55:99:0,153,2264	0/1:22,0:20:6.46:6,0,29	0/0:11,0:11:24.05:0,24,343
chr10	36976491	.	T	TAC	2003.74	PASS	AB=0.818;AC=16;AF=0.308;AN=52;BaseQRankSum=1.276;DP=1007;FS=35.263;HRun=0;HaplotypeScore=212.0761;InbreedingCoeff=0.7127;MQ=44.43;MQ0=48;MQRankSum=-7.105;QD=6.93;ReadPosRankSum=-6.589;VQSLOD=0.6684;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:43:68.54:0,69,513	1/1:6,4:10:4.10:92,4,0	./.	0/0:31,0:5:3.01:0,3,39	0/0:22,0:22:48.63:0,49,625	0/0:28,0:26:51.31:0,51,412	0/0:42,0:37:16.59:0,17,253	0/1:71,9:53:99:664,0,153	0/0:61,0:60:99:0,166,2119	0/0:65,0:56:78.64:0,79,874	0/0:23,0:22:41.42:0,41,333	0/0:42,0:42:99:0,111,1417	1/1:13,10:19:12.79:198,13,0	1/1:11,13:23:2.90:50,3,0	0/0:55,0:50:92.08:0,92,728	0/0:43,0:42:97.05:0,97,1268	0/0:37,0:37:77.99:0,78,960	0/0:46,0:46:74.43:0,74,726	1/1:21,6:19:35.88:436,36,0	1/1:21,11:25:12.02:177,12,0	0/1:30,17:37:41.28:41,0,53	1/1:13,7:14:14.54:205,15,0	0/0:32,0:31:51.12:0,51,620	0/0:44,0:44:87.05:0,87,1102	./.	0/0:59,0:54:67.44:0,67,986	1/1:11,11:20:27.44:321,27,0	0/0:11,0:11:16.91:0,17,170
chr10	36976497	.	C	CAT	1306.76	PASS	AB=0.974;AC=17;AF=0.304;AN=56;BaseQRankSum=5.766;DP=1024;FS=59.237;HRun=0;HaplotypeScore=219.0361;InbreedingCoeff=0.4836;MQ=44.43;MQ0=49;MQRankSum=-7.165;QD=3.62;ReadPosRankSum=-1.521;VQSLOD=0.8025;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:46:80.09:0,80,980	1/1:11,0:11:3.71:44,4,0	0/0:21,0:2:3.01:0,3,44	0/0:26,1:4:11.98:0,12,130	0/0:20,0:19:54.15:0,54,783	0/0:28,0:26:49.94:0,50,689	0/0:43,0:38:40.75:0,41,544	0/1:85,0:55:99:450,0,405	0/0:64,0:62:99:0,169,2540	0/0:69,0:59:99:0,118,1462	0/0:26,0:25:32.20:0,32,525	0/0:40,0:40:99:0,111,1690	1/1:16,5:19:9.78:109,10,0	1/1:20,4:23:3.20:34,3,0	0/0:62,0:57:99:0,105,1382	0/0:39,0:38:99:0,105,1543	0/0:37,0:38:84.55:0,85,1178	0/0:48,1:50:47.22:0,47,1260	0/1:25,1:17:8.58:250,0,9	1/1:27,5:26:9.11:81,9,0	0/1:50,0:42:18.74:19,0,43	1/1:18,2:15:10:97,10,0	0/0:30,0:29:57.16:0,57,815	0/0:45,0:45:96.07:0,96,1385	0/0:8,6:14:0:0,0,0	0/1:44,0:54:99:150,0,1146	1/1:18,4:20:19.50:243,19,0	0/1:6,1:10:2.21:2,0,166
chr10	36976509	.	T	TAC	775.32	PASS	AB=1.000;AC=5;AF=0.093;AN=54;BaseQRankSum=5.517;DP=979;FS=7.135;HRun=0;HaplotypeScore=222.3115;InbreedingCoeff=0.6475;MQ=44.79;MQ0=40;MQRankSum=-4.708;QD=9.23;ReadPosRankSum=-0.787;VQSLOD=2.0946;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:72.69:0,73,1019	0/0:10,0:10:6.48:0,6,85	0/0:27,0:2:6.01:0,6,62	0/0:33,0:6:18.05:0,18,242	0/0:21,0:20:54.15:0,54,736	0/0:28,0:28:57.17:0,57,790	0/0:44,0:41:66.56:0,67,927	0/0:73,0:57:99:0,117,1365	0/0:58,0:56:99:0,141,2053	0/0:63,0:56:99:0,135,1821	0/0:22,0:23:35.76:0,36,486	0/0:39,0:39:99:0,103,1414	0/1:18,0:17:1.37:1,0,75	0/0:23,0:22:2.90:0,3,16	0/0:55,0:54:99:0,102,1594	0/0:31,0:30:81.13:0,81,1138	0/0:38,0:38:70.22:0,70,973	0/0:47,0:47:99:0,104,1482	0/0:26,0:18:43.34:0,43,556	0/0:33,0:27:12.04:0,12,168	0/0:55,0:48:17.93:0,18,226	0/0:19,0:17:11.87:0,12,167	0/0:27,0:26:56.40:0,56,775	0/0:42,0:42:77.72:0,78,1071	./.	1/1:50,4:50:10.18:755,10,0	0/0:22,0:20:9.08:0,9,173	1/1:10,0:10:10.89:127,11,0
chr10	36976551	.	CACAT	C	2226.44	PASS	AB=0.977;AC=16;AF=0.286;AN=56;BaseQRankSum=2.433;DP=852;FS=10.797;HRun=0;HaplotypeScore=219.9976;InbreedingCoeff=-0.2690;MQ=45.12;MQ0=33;MQRankSum=2.419;QD=4.59;ReadPosRankSum=2.330;VQSLOD=1.2587;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:47,0:47:99:284,0,271	0/0:14,0:14:6.23:0,6,51	0/1:19,0:6:4:4,0,44	0/0:28,0:5:14.64:0,15,108	0/1:21,0:20:12.42:12,0,201	0/1:23,0:23:99:129,0,105	0/1:42,0:40:99:146,0,216	0/0:56,0:39:83.89:0,84,721	0/1:39,3:41:99:121,0,815	0/1:53,0:50:99:292,0,396	0/1:19,0:19:31.01:31,0,60	0/0:30,0:28:31.69:0,32,715	0/0:17,0:15:6.91:0,7,64	1/1:18,0:18:2.11:9,2,0	0/1:47,2:48:99:529,0,190	0/1:27,1:27:93.15:93,0,478	0/1:31,5:36:64.76:65,0,789	0/1:30,1:30:99:319,0,128	0/0:25,0:16:38.07:0,38,277	0/0:26,0:24:17.55:0,18,125	0/0:52,0:47:23.03:0,23,162	0/0:26,0:24:17.66:0,18,126	0/0:28,0:27:23.83:0,24,744	0/0:41,0:41:21.56:0,22,1058	0/0:7,0:7:2.84:0,3,14	0/1:46,0:43:99:227,0,352	0/0:15,0:15:11.74:0,12,75	0/1:10,0:10:5.84:118,0,6
chr10	36976555	.	TACAC	T	4737.38	PASS	AB=0.942;AC=27;AF=0.519;AN=52;BaseQRankSum=-4.877;DP=848;FS=6.371;HRun=0;HaplotypeScore=209.0718;InbreedingCoeff=0.5329;MQ=45.06;MQ0=33;MQRankSum=0.675;QD=9.93;ReadPosRankSum=1.122;VQSLOD=3.4571;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:32,15:48:43:673,43,0	0/0:5,0:14:0:0,0,0	0/1:19,0:7:2.42:2,0,14	0/0:31,0:8:8.97:0,9,72	0/0:23,0:23:20.64:0,21,182	1/1:11,11:22:18.06:288,18,0	1/1:38,6:42:35.01:492,35,0	./.	0/0:31,0:38:18.99:0,19,606	1/1:36,13:47:53.73:775,54,0	1/1:11,7:19:6.02:96,6,0	0/0:24,0:28:45.78:0,46,606	./.	0/0:16,0:20:1.14:0,1,4	1/1:33,15:47:66.19:999,66,0	0/1:24,0:28:17.72:18,0,286	0/0:26,0:33:2.08:0,2,591	1/1:19,8:27:15.96:562,16,0	0/0:24,0:19:9.31:0,9,75	1/1:18,0:24:6.44:23,6,0	1/1:53,0:50:7.54:23,8,0	1/1:15,0:24:4.92:20,5,0	0/0:20,0:28:43.63:0,44,726	0/0:30,0:40:0.61:0,1,769	1/1:5,0:7:2.60:10,3,0	0/1:34,7:41:11.22:530,0,11	0/0:13,0:16:2.92:0,3,17	1/1:3,7:11:5.51:228,6,0
chr10	36976557	.	C	CAT	880.90	PASS	AB=0.964;AC=15;AF=0.268;AN=56;BaseQRankSum=1.178;DP=849;FS=1.059;HRun=0;HaplotypeScore=207.4542;InbreedingCoeff=-0.1718;MQ=45.21;MQ0=33;MQRankSum=0.872;QD=2.19;ReadPosRankSum=3.678;VQSLOD=2.3260;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:50:93.31:0,93,717	0/0:14,0:14:5.99:0,6,48	0/0:20,0:8:16.07:0,16,110	0/0:30,0:9:17.90:0,18,172	0/1:23,1:23:20.23:20,0,225	0/0:22,0:22:35.86:0,36,275	0/0:45,0:42:61.97:0,62,541	0/0:51,0:35:40.98:0,41,554	0/1:40,0:39:43.28:43,0,338	0/0:50,0:47:99:0,104,845	0/0:19,0:19:14.96:0,15,120	0/1:30,0:29:99:115,0,223	0/0:16,1:15:6.82:0,7,43	1/1:19,2:22:5.89:54,6,0	0/0:47,0:45:99:0,99,719	0/1:27,0:26:5.31:5,0,245	0/1:34,0:34:7.96:8,0,170	0/0:28,0:27:61.14:0,61,441	0/1:24,2:19:99:177,0,166	0/1:22,3:23:74.70:121,0,75	0/1:55,1:51:67.11:67,0,133	0/1:23,2:23:73.94:90,0,74	0/1:28,0:27:73.47:73,0,274	0/1:39,0:40:99:173,0,273	0/1:8,1:9:3.36:48,0,3	0/0:42,0:40:95.65:0,96,687	0/1:14,1:15:41.55:42,0,45	0/0:11,0:11:17.90:0,18,133
chr10	36976719	.	T	TTGGGATA	17167.83	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-4.754;DP=707;FS=27.080;HRun=0;HaplotypeScore=153.5201;InbreedingCoeff=0.9992;MQ=83.85;MQ0=1;MQRankSum=-15.934;QD=84.16;ReadPosRankSum=-3.709;VQSLOD=3.1198;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,132,3311	1/1:3,4:7:21.07:829,21,0	0/0:33,0:33:69.24:0,69,1749	0/0:18,0:18:42.14:0,42,990	0/0:26,0:26:72.25:0,72,1846	0/0:14,0:15:42.14:0,42,1066	0/0:35,0:35:90.31:0,90,2274	1/1:21,13:36:96.33:3216,96,0	0/0:31,0:31:84.29:0,84,2119	0/0:29,0:29:87.26:0,87,2037	0/0:25,0:25:69.24:0,69,1768	0/0:29,0:29:75.26:0,75,1922	1/1:8,8:16:39.13:1472,39,0	1/1:4,15:20:51.17:1987,51,0	0/0:32,0:32:81.28:0,81,2055	0/0:21,0:21:63.22:0,63,1590	0/0:33,0:33:93.31:0,93,2285	0/0:26,0:26:66.23:0,66,1689	1/1:14,15:30:72.24:2556,72,0	1/1:3,9:13:33.11:1253,33,0	1/1:13,7:23:33.11:1263,33,0	1/1:9,17:28:57.20:2156,57,0	0/0:15,0:15:45.15:0,45,1124	0/0:26,0:26:63.16:0,63,1507	1/1:2,11:15:30.10:1133,30,0	0/0:40,0:40:99:0,117,2784	1/1:0,12:14:33.11:1303,33,0	0/0:16,0:16:48.16:0,48,1219
chr10	36977566	.	TCTC	T	6112.05	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=13.623;DP=574;FS=0.771;HRun=0;HaplotypeScore=81.4550;InbreedingCoeff=0.9860;MQ=70.49;MQ0=2;MQRankSum=-1.194;QD=32.00;ReadPosRankSum=1.294;VQSLOD=5.1716;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:76.07:0,76,1529	1/1:0,3:3:9.03:138,9,0	0/0:22,0:15:36.11:0,36,724	0/0:25,0:18:38.65:0,39,597	0/0:25,0:25:66.23:0,66,1404	0/0:21,0:21:54.19:0,54,1136	0/0:32,0:32:81.28:0,81,1710	1/1:7,21:28:57.13:766,57,0	0/0:18,0:18:54.19:0,54,1147	0/0:27,0:26:75.26:0,75,1572	0/0:22,0:22:60.19:0,60,1223	0/0:19,0:19:47.91:0,48,985	1/1:1,11:12:20.81:322,21,0	1/1:1,13:14:30.10:460,30,0	0/0:21,0:21:60.21:0,60,1279	0/0:16,0:16:45.14:0,45,922	0/0:18,0:18:42.14:0,42,895	0/0:17,0:17:48.15:0,48,983	1/1:5,19:23:54.13:763,54,0	1/1:4,19:23:51.10:731,51,0	1/1:0,20:20:48.16:736,48,0	1/1:2,17:19:45.08:660,45,0	0/0:19,0:19:54.19:0,54,1149	0/0:17,0:17:45.15:0,45,960	1/1:2,20:22:42.14:644,42,0	0/0:31,0:31:75.25:0,75,1549	1/1:4,22:26:60.16:893,60,0	0/0:6,0:6:12.04:0,12,256
chr10	36978667	.	A	ACACAACT	5981.91	PASS	AB=0.858;AC=10;AF=0.179;AN=56;BaseQRankSum=8.830;DP=1064;FS=4.438;HRun=0;HaplotypeScore=337.3066;InbreedingCoeff=-0.2180;MQ=56.01;MQ0=23;MQRankSum=-8.452;QD=16.12;ReadPosRankSum=-3.839;VQSLOD=2.5153;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:36.12:0,36,875	0/1:11,6:18:99:313,0,136	0/0:70,0:23:41.61:0,42,697	0/0:72,0:25:20.30:0,20,355	0/0:25,0:25:72.23:0,72,1632	0/0:22,0:22:39.13:0,39,887	0/0:39,0:39:54.02:0,54,1190	0/1:79,0:67:99:1024,0,840	0/0:36,0:36:96.31:0,96,2217	0/0:45,0:44:99:0,108,2378	0/0:19,0:19:30.10:0,30,675	0/0:45,0:45:99:0,126,2943	0/1:36,0:35:99:1085,0,228	0/1:17,17:36:86.20:373,0,86	0/0:29,0:29:42.14:0,42,987	0/0:42,0:40:99:0,126,3071	0/0:30,0:29:78.25:0,78,1920	0/0:33,0:33:19.71:0,20,713	0/1:21,0:18:99:277,0,280	0/1:36,3:39:99:1182,0,104	0/1:53,0:51:99:437,0,129	0/1:29,1:30:64.29:518,0,64	0/0:21,0:21:57.20:0,57,1378	0/0:73,0:73:99:0,201,4871	0/1:20,12:33:99:503,0,99	0/0:38,0:38:99:0,108,2475	0/1:8,18:26:99:270,0,130	0/0:13,0:13:39.13:0,39,927
chr10	36978675	.	TCACA	T	2819.82	PASS	AB=0.798;AC=10;AF=0.179;AN=56;BaseQRankSum=8.257;DP=1069;FS=43.069;HRun=0;HaplotypeScore=320.3656;InbreedingCoeff=-0.2209;MQ=55.98;MQ0=23;MQRankSum=-8.675;QD=7.83;ReadPosRankSum=-3.793;VQSLOD=1.4391;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:32.21:0,32,726	0/1:8,10:18:99:300,0,150	0/0:77,0:27:52.03:0,52,871	0/0:68,0:24:8.59:0,9,430	0/0:24,0:24:66.21:0,66,1597	0/0:26,0:27:32.41:0,32,700	0/0:40,0:40:45.10:0,45,810	0/1:54,20:62:99:897,0,613	0/0:37,0:37:93.29:0,93,2253	0/0:44,0:44:99:0,105,2309	0/0:20,0:20:20.24:0,20,502	0/0:42,0:42:99:0,111,2658	0/1:29,6:34:99:240,0,495	0/1:26,5:31:99:282,0,111	0/0:30,0:30:35.36:0,35,900	0/0:45,0:43:99:0,123,3050	0/0:33,0:32:84.27:0,84,2016	0/0:32,0:32:33.03:0,33,724	0/1:19,3:19:99:102,0,213	0/1:27,12:39:99:339,0,662	0/1:51,9:58:99:100,0,170	0/1:20,7:27:99:177,0,223	0/0:18,0:18:51.14:0,51,1178	0/0:77,0:77:99:0,214,5198	0/1:18,13:31:99:293,0,383	0/0:37,0:37:99:0,99,2372	0/1:18,5:23:99:236,0,151	0/0:14,0:14:42.14:0,42,1043
chr10	36978691	.	T	TCA	5718.33	PASS	AB=0.694;AC=10;AF=0.179;AN=56;BaseQRankSum=2.888;DP=1014;FS=45.045;HRun=0;HaplotypeScore=302.9032;InbreedingCoeff=-0.1583;MQ=57.74;MQ0=19;MQRankSum=-6.883;QD=16.15;ReadPosRankSum=-6.885;VQSLOD=2.6985;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:15.05:0,15,194	0/1:7,11:18:4.25:469,0,4	0/0:64,0:32:74.70:0,75,873	0/0:67,0:30:9.11:0,9,554	0/0:25,0:25:69.22:0,69,907	0/0:21,0:21:14.99:0,15,174	0/0:35,0:35:21.07:0,21,273	0/1:35,24:49:88.03:1225,0,88	0/0:39,0:39:99:0,102,1340	0/0:41,0:41:96.09:0,96,1230	0/0:19,0:19:15.01:0,15,174	0/0:39,0:39:99:0,102,1337	0/1:24,11:34:99:596,0,127	0/1:17,14:29:16.46:564,0,16	0/0:29,0:29:21:0,21,226	0/0:39,0:37:99:0,108,1417	0/0:33,0:32:81.26:0,81,1064	0/0:31,0:31:21.03:0,21,247	0/1:17,10:24:50.57:635,0,51	0/1:28,19:47:48.64:899,0,49	0/1:23,38:60:17.13:266,0,17	0/1:14,11:25:64.21:226,0,64	0/0:15,0:15:39.11:0,39,497	0/0:71,0:71:99:0,181,2331	0/1:17,17:34:54.80:511,0,55	0/0:36,0:36:99:0,99,1301	0/1:11,6:17:41.06:327,0,41	0/0:14,0:14:42.14:0,42,552
chr10	36978707	.	CCACCCACACATACAGAGT	C	3858.79	PASS	AB=0.608;AC=11;AF=0.196;AN=56;BaseQRankSum=7.513;DP=989;FS=6.923;HRun=0;HaplotypeScore=510.5488;InbreedingCoeff=0.6010;MQ=61.18;MQ0=7;MQRankSum=-4.470;QD=16.01;ReadPosRankSum=0.229;VQSLOD=-0.0284;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:2,42:44:0.07:0,0,0	0/0:20,0:20:45.31:0,45,1631	0/0:47,0:36:60.72:0,61,2519	0/0:62,0:44:69.40:0,69,2686	0/0:24,0:24:72.19:0,72,3696	0/1:1,18:19:0.04:0,0,0	1/1:1,35:36:12.04:375,12,0	0/0:49,0:47:99:0,125,4425	0/0:39,0:39:99:0,111,7348	1/1:2,34:36:76.54:2864,77,0	0/1:0,16:16:0:0,0,0	0/0:40,0:40:99:0,117,6803	0/0:33,0:32:6.75:0,7,3563	0/1:30,0:28:25.39:25,0,2247	1/1:1,27:28:4.72:142,5,0	0/0:38,0:36:99:0,111,6402	0/0:33,0:32:96.30:0,96,6258	0/1:2,30:32:99:452,0,197	0/0:25,0:24:68.44:0,68,2319	0/0:48,0:48:63.71:0,64,4052	0/0:79,0:78:42.38:0,42,2766	0/0:21,0:21:35.62:0,36,1741	0/0:17,0:17:48.14:0,48,2630	0/0:64,0:64:99:0,183,11091	0/0:36,0:36:65.37:0,65,2588	0/0:37,0:37:99:0,102,6273	0/0:21,0:21:44.72:0,45,2267	0/0:13,0:13:39.12:0,39,2745
chr10	36978720	.	CAGAG	C	405.72	PASS	AB=0.990;AC=10;AF=0.179;AN=56;BaseQRankSum=8.631;DP=1008;FS=3.482;HRun=0;HaplotypeScore=319.3306;InbreedingCoeff=0.2355;MQ=59.30;MQ0=8;MQRankSum=-6.174;QD=1.19;ReadPosRankSum=1.121;VQSLOD=1.7605;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:42,1:43:0:1,0,0	0/0:19,0:19:33.58:0,34,941	0/0:56,0:34:92.40:0,92,2111	0/0:62,0:41:96.72:0,97,1914	0/0:22,0:22:66.23:0,66,1775	0/1:18,0:18:0:1,0,0	1/1:36,0:36:2.94:28,3,0	0/0:52,0:50:99:0,144,3373	0/0:40,0:40:99:0,117,3229	0/1:34,0:34:53.67:315,0,54	0/1:16,0:16:0:1,0,0	0/0:43,0:43:99:0,126,3499	0/1:35,0:34:2.24:2,0,1653	0/1:32,0:30:67.05:67,0,881	0/0:27,0:27:0.70:0,1,4	0/0:37,0:36:99:0,111,3160	0/0:37,0:36:99:0,108,2977	0/1:31,0:31:72.04:72,0,75	0/0:25,0:21:63.06:0,63,1457	0/0:46,0:46:61.21:0,61,1633	0/1:89,6:94:38.58:39,0,1162	0/0:22,0:22:38.49:0,38,989	0/0:13,0:13:39.12:0,39,980	0/0:66,0:66:99:0,189,5228	0/0:34,0:34:38.04:0,38,1028	0/0:34,0:34:99:0,102,2764	0/0:20,0:20:41.43:0,41,1132	0/0:12,0:12:36.12:0,36,1043
chr10	36978809	.	A	ACAGT	7092.44	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=9.437;DP=878;FS=8.332;HRun=0;HaplotypeScore=225.0728;InbreedingCoeff=0.9684;MQ=66.33;MQ0=7;MQRankSum=-10.205;QD=30.97;ReadPosRankSum=-2.336;VQSLOD=3.0287;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:31:49.05:0,49,919	1/1:5,7:12:24.06:543,24,0	0/0:49,0:31:84.74:0,85,1496	0/0:67,0:44:99:0,107,1797	0/0:30,0:30:84.29:0,84,1602	0/0:22,0:22:51.09:0,51,956	0/0:38,0:38:84.72:0,85,1544	1/1:9,9:18:45.15:1013,45,0	0/0:40,0:40:99:0,117,2181	0/0:36,0:35:99:0,102,1898	0/0:15,0:15:45.15:0,45,846	0/0:41,0:41:99:0,114,2194	1/1:7,16:23:51.14:1182,51,0	1/1:5,7:12:5.73:135,6,0	0/0:33,0:32:72.25:0,72,1388	0/0:43,0:43:99:0,114,2117	0/0:41,0:41:99:0,114,2170	0/0:37,0:37:87.28:0,87,1651	1/1:3,8:11:9.99:617,10,0	1/1:4,26:32:24.08:601,24,0	1/1:21,21:44:11.95:407,12,0	1/1:4,14:21:15.05:343,15,0	0/0:18,0:18:51.17:0,51,986	0/0:57,0:57:99:0,156,2923	1/1:8,23:31:39.13:957,39,0	0/0:41,0:41:99:0,123,2295	1/1:4,18:20:51.13:1294,51,0	0/0:9,0:9:27.09:0,27,508
chr10	36978811	.	A	AGT	2219.70	PASS	AB=0.978;AC=17;AF=0.304;AN=56;BaseQRankSum=11.769;DP=857;FS=7.193;HRun=0;HaplotypeScore=210.8731;InbreedingCoeff=0.6775;MQ=67.48;MQ0=7;MQRankSum=-8.239;QD=10.32;ReadPosRankSum=-1.133;VQSLOD=2.3330;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:30:50.20:0,50,785	1/1:10,1:11:5.17:165,5,0	0/0:47,0:31:84.29:0,84,1351	0/0:67,0:46:99:0,101,1607	0/0:32,0:32:87.30:0,87,1409	0/0:23,0:23:51.02:0,51,816	0/0:37,0:37:84.71:0,85,1332	0/1:15,0:14:10.65:262,0,11	0/0:41,0:41:99:0,117,1880	0/0:36,0:35:99:0,105,1698	0/0:15,0:15:45.15:0,45,727	0/0:40,0:40:99:0,114,1856	1/1:20,1:21:36.19:451,36,0	1/1:10,0:10:2.89:28,3,0	0/0:32,0:31:72.25:0,72,1174	0/0:41,0:41:99:0,120,1894	0/0:41,0:41:99:0,114,1846	0/0:35,0:35:93.26:0,93,1451	0/1:13,0:12:55.76:164,0,56	1/1:31,0:31:6.25:170,6,0	0/1:39,2:42:36.24:202,0,36	1/1:22,0:22:15.03:181,15,0	0/0:18,0:18:51.17:0,51,832	0/0:55,0:55:99:0,156,2495	1/1:29,0:29:22.25:364,22,0	0/0:41,0:41:99:0,123,1963	1/1:21,0:19:30.78:422,31,0	0/0:9,0:9:27.09:0,27,435
chr10	36978861	.	A	AGAG	5438.94	PASS	AB=0.689;AC=16;AF=0.286;AN=56;BaseQRankSum=15.084;DP=716;FS=12.410;HRun=0;HaplotypeScore=208.6100;InbreedingCoeff=0.6059;MQ=61.98;MQ0=6;MQRankSum=-13.475;QD=27.61;ReadPosRankSum=-1.861;VQSLOD=3.6952;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:30:81.28:0,81,1484	1/1:7,1:11:16:326,16,0	0/0:34,0:22:39.29:0,39,922	0/0:46,0:29:43.94:0,44,680	0/0:28,0:28:84.29:0,84,1556	0/0:25,0:25:74.46:0,74,1301	0/0:32,0:32:90.29:0,90,1611	0/1:6,0:27:8.80:1075,0,9	0/0:26,0:26:78.25:0,78,1381	0/0:37,0:37:99:0,105,1897	0/0:15,0:15:45.14:0,45,807	0/0:24,0:24:72.23:0,72,1305	1/1:9,1:12:9.30:350,9,0	0/1:8,1:12:44.60:200,0,45	0/0:19,0:19:57.19:0,57,1030	0/0:34,0:34:93.32:0,93,1684	0/0:30,0:30:81.28:0,81,1510	0/0:29,0:29:84.29:0,84,1547	1/1:7,0:18:4.47:624,4,0	1/1:13,1:35:87.20:1154,87,0	1/1:10,1:12:9.01:120,9,0	1/1:10,1:25:37.22:741,37,0	0/0:21,0:21:60.21:0,60,1111	0/0:43,0:43:99:0,109,2205	0/1:20,1:29:55.57:463,0,56	0/0:39,0:39:99:0,114,2040	0/1:8,0:14:69.48:385,0,69	0/0:4,0:4:12.04:0,12,224
chr10	36978879	.	GCAA	G	247.47	PASS	AB=0.875;AC=6;AF=0.107;AN=56;BaseQRankSum=6.618;DP=702;FS=1.742;HRun=0;HaplotypeScore=213.6480;InbreedingCoeff=-0.1253;MQ=67.92;MQ0=4;MQRankSum=-4.808;QD=2.36;ReadPosRankSum=-3.206;VQSLOD=2.3337;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:35:99:0,102,2411	0/0:9,0:9:27.02:0,27,565	0/0:36,0:28:66.16:0,66,1242	0/0:56,0:41:69.26:0,69,1409	0/0:32,0:32:96.33:0,96,2323	0/0:22,0:22:66.23:0,66,1527	0/0:27,0:27:78.26:0,78,1730	0/0:37,0:35:96.79:0,97,2214	0/0:29,0:29:87.28:0,87,2020	0/0:30,0:30:90.30:0,90,2142	0/0:17,0:17:51.17:0,51,1200	0/0:23,0:23:69.22:0,69,1533	0/1:11,0:11:12.77:13,0,455	0/1:7,5:12:99:193,0,365	0/0:15,0:15:45.15:0,45,887	0/0:30,0:30:87.28:0,87,2044	0/0:26,0:25:72.25:0,72,1716	0/0:29,0:29:84.29:0,84,2008	0/1:18,2:20:53.05:53,0,1089	0/0:30,2:31:3.20:0,3,987	0/0:5,1:6:8.88:0,9,161	0/1:22,2:24:26.75:27,0,936	0/0:24,0:24:69.24:0,69,1640	0/0:35,0:35:96.33:0,96,2297	0/1:21,3:24:6.52:7,0,935	0/0:35,0:35:99:0,105,2462	0/1:11,3:14:75.16:75,0,543	0/0:7,0:7:15.05:0,15,365
chr10	36978910	.	G	GAGAGAGACAGAGAC	7925.07	PASS	AB=0.985;AC=22;AF=0.393;AN=56;BaseQRankSum=4.569;DP=699;FS=63.631;HRun=0;HaplotypeScore=290.5363;InbreedingCoeff=0.8487;MQ=65.69;MQ0=18;MQRankSum=-9.514;QD=23.73;ReadPosRankSum=-1.033;VQSLOD=1.9117;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:59.91:0,60,1928	1/1:10,1:10:23.88:430,24,0	0/1:57,0:26:2.85:3,0,296	0/1:80,0:45:16.24:16,0,412	0/0:33,0:33:72.16:0,72,2091	0/0:21,0:21:51.13:0,51,1595	0/0:21,0:20:47.98:0,48,1233	1/1:37,0:34:69.06:1169,69,0	0/0:23,0:23:60.18:0,60,1940	0/0:36,0:35:90.15:0,90,1963	0/0:17,0:17:39.08:0,39,1117	0/0:16,0:16:33.09:0,33,976	1/1:7,6:18:18.23:772,18,0	1/1:15,0:15:27.03:1032,27,0	0/0:11,0:11:18.06:0,18,582	0/0:21,0:21:54.13:0,54,1292	0/0:21,0:20:54.11:0,54,1640	0/0:28,0:28:54.15:0,54,1691	1/1:21,0:20:48.12:1264,48,0	1/1:19,1:19:12.04:464,12,0	1/1:9,0:9:11.77:82,12,0	1/1:19,1:20:5.98:309,6,0	0/0:23,0:23:51.06:0,51,1192	0/0:25,0:25:60.14:0,60,1695	1/1:22,4:25:27.55:1355,28,0	0/0:27,0:27:65.93:0,66,1891	1/1:17,1:18:30:1029,30,0	0/0:17,0:17:48.13:0,48,1385
chr10	36978918	.	CAG	C	353.05	PASS	AB=0.817;AC=5;AF=0.089;AN=56;BaseQRankSum=7.215;DP=686;FS=35.933;HRun=0;HaplotypeScore=168.1983;InbreedingCoeff=-0.1056;MQ=67.76;MQ0=16;MQRankSum=-3.089;QD=3.33;ReadPosRankSum=-2.613;VQSLOD=1.1387;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:63.20:0,63,1076	0/1:9,3:11:94.48:94,0,207	0/0:56,0:26:28.04:0,28,605	0/0:78,1:45:0.97:0,1,625	0/0:32,0:32:93.28:0,93,1508	0/0:22,0:22:57.19:0,57,957	0/0:23,0:22:51.16:0,51,845	0/1:32,3:32:99:123,0,990	0/0:24,0:24:69.22:0,69,1163	0/0:37,0:36:99:0,99,1660	0/0:17,0:17:39.13:0,39,680	0/0:13,0:13:33.11:0,33,578	0/1:12,6:18:60.52:67,0,61	0/0:13,2:15:27.09:0,27,424	0/0:14,0:14:30.08:0,30,465	0/0:21,0:21:57.17:0,57,924	0/0:20,0:19:60.21:0,60,1046	0/0:24,0:24:57.19:0,57,983	0/1:16,6:21:99:176,0,379	0/0:10,8:17:12.03:0,12,181	0/0:10,0:10:15.04:0,15,224	0/0:11,7:18:6.02:0,6,87	0/0:19,0:19:51.15:0,51,847	0/0:24,0:24:66.14:0,66,1074	0/0:21,7:28:27.05:0,27,368	0/0:25,0:25:71.96:0,72,1169	0/1:15,4:19:1.87:2,0,469	0/0:16,0:16:48.16:0,48,838
chr10	36979245	.	C	CTT	3097.10	PASS	AB=0.960;AC=29;AF=0.518;AN=56;BaseQRankSum=7.962;DP=734;FS=1.215;HRun=15;HaplotypeScore=127.5232;InbreedingCoeff=0.7673;MQ=71.98;MQ0=13;MQRankSum=-5.124;QD=8.63;ReadPosRankSum=-1.287;VQSLOD=1.5594;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:35:23.23:0,23,319	1/1:9,0:10:14.97:122,15,0	0/0:63,0:24:2.82:0,3,62	0/1:53,0:29:13.42:13,0,35	0/0:23,0:27:23.94:0,24,217	0/1:17,0:20:0.82:1,0,171	0/0:20,0:20:43.22:0,43,281	1/1:31,0:32:66.84:490,67,0	0/0:30,0:31:22.57:0,23,361	0/0:20,0:20:14.66:0,15,103	0/0:19,0:20:29.14:0,29,220	1/1:17,2:21:22.81:345,23,0	1/1:16,0:16:26.94:224,27,0	1/1:14,0:14:26.54:221,27,0	0/0:21,0:21:46.25:0,46,327	0/1:16,0:17:10.89:11,0,148	0/0:45,0:45:72:0,72,524	0/0:43,0:46:17.28:0,17,425	1/1:23,0:22:33.80:202,34,0	1/1:15,0:15:17.96:143,18,0	1/1:18,0:18:8.97:69,9,0	1/1:14,0:15:27.33:227,27,0	1/1:13,12:27:16.78:137,17,0	1/1:24,8:33:68.19:643,68,0	1/1:9,0:10:17.96:147,18,0	0/0:33,0:34:40.28:0,40,333	1/1:28,0:28:41.99:317,42,0	0/0:11,0:11:5.77:0,6,47
chr10	36979255	.	T	TTTC	5145.67	PASS	AB=0.714;AC=19;AF=0.339;AN=56;BaseQRankSum=-1.667;DP=714;FS=4.493;HRun=0;HaplotypeScore=125.8106;InbreedingCoeff=0.9008;MQ=70.20;MQ0=13;MQRankSum=-5.751;QD=29.07;ReadPosRankSum=2.397;VQSLOD=5.2318;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:68.24:0,68,842	1/1:1,8:9:14.99:261,15,0	0/0:70,0:20:16.64:0,17,179	0/0:58,0:28:15.05:0,15,233	0/0:26,0:26:71.86:0,72,759	0/0:23,0:23:64.41:0,64,682	0/0:19,0:19:54.14:0,54,692	1/1:2,24:29:80.76:1219,81,0	0/0:31,0:31:85.80:0,86,1029	0/0:19,0:19:49.93:0,50,491	0/0:16,0:16:42.07:0,42,543	0/0:21,0:21:2.86:0,3,185	1/1:3,9:16:27.03:455,27,0	1/1:1,13:16:27.04:508,27,0	0/0:23,0:23:69.15:0,69,847	0/0:14,0:14:34.04:0,34,433	0/0:41,0:41:99:0,111,1329	0/0:43,0:43:99:0,120,1352	1/1:6,17:25:65.88:763,66,0	0/1:9,6:15:2.65:378,0,3	1/1:0,10:12:9.03:173,9,0	1/1:11,4:15:30.06:439,30,0	0/0:21,0:21:14.01:0,14,139	0/0:36,0:36:57.46:0,57,321	1/1:4,8:12:16.55:287,17,0	0/0:33,0:33:90.82:0,91,1021	1/1:4,18:26:28.08:662,28,0	0/0:6,0:6:18.01:0,18,189
chr10	36979395	.	A	AG	8672.27	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=19.728;DP=718;FS=3.501;HRun=3;HaplotypeScore=123.1512;InbreedingCoeff=0.9885;MQ=78.91;MQ0=0;MQRankSum=-4.221;QD=34.01;ReadPosRankSum=-0.111;VQSLOD=3.9467;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,150,1798	1/1:1,6:7:12.04:168,12,0	0/0:16,0:16:42.11:0,42,487	0/0:21,0:21:63.15:0,63,725	0/0:21,0:21:51.16:0,51,611	0/0:17,0:17:51.14:0,51,600	0/0:32,0:32:87.25:0,87,1033	1/1:3,18:21:15.14:615,15,0	0/0:28,0:28:84.26:0,84,1007	0/0:24,0:24:66.20:0,66,790	0/0:15,0:15:42.12:0,42,493	0/0:29,0:29:75.23:0,75,900	1/1:4,20:24:60.20:838,60,0	1/1:1,30:31:81.27:1133,81,0	0/0:21,0:21:57.17:0,57,684	0/0:22,0:22:63.19:0,63,756	0/0:37,0:37:99:0,108,1280	0/0:29,0:29:81.23:0,81,960	1/1:2,15:17:39.13:545,39,0	1/1:3,14:17:39.13:546,39,0	1/1:3,55:58:99:1819,132,0	1/1:1,26:27:72.24:995,72,0	0/0:20,0:20:48.14:0,48,575	0/0:41,0:41:99:0,117,1404	1/1:1,23:24:69.23:964,69,0	0/0:32,0:32:93.28:0,93,1116	1/1:3,26:29:75.25:1049,75,0	0/0:4,0:4:12.04:0,12,144
chr10	36980214	.	CGTGTGTGTGTGTGTGTGGGTGG	C	1752.21	PASS	AB=0.979;AC=21;AF=0.375;AN=56;BaseQRankSum=3.794;DP=607;FS=8.821;HRun=0;HaplotypeScore=281.8329;InbreedingCoeff=0.6877;MQ=56.08;MQ0=23;MQRankSum=1.676;QD=7.75;ReadPosRankSum=-1.707;VQSLOD=0.9437;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:48.12:0,48,812	1/1:5,6:11:9.03:232,9,0	0/1:41,0:13:44.65:45,0,168	0/1:50,0:16:13.38:13,0,103	0/0:19,0:19:23.26:0,23,583	0/0:29,0:29:44.71:0,45,930	0/0:29,0:28:36.07:0,36,698	1/1:23,0:23:27.58:435,28,0	0/0:27,0:25:61.07:0,61,3275	0/0:30,0:28:48.19:0,48,1043	0/0:24,0:24:39.03:0,39,605	0/0:15,0:15:6.16:0,6,424	0/1:14,0:15:0:0,0,0	1/1:12,0:11:21.05:290,21,0	0/0:23,0:22:6.51:0,7,401	0/0:16,0:16:15.07:0,15,1317	0/0:33,0:31:64.90:0,65,3745	0/0:17,0:17:39.37:0,39,736	1/1:16,0:16:27.02:316,27,0	1/1:11,0:11:2.50:9,2,0	1/1:13,0:12:8.61:139,9,0	1/1:14,0:14:3.48:55,3,0	0/0:11,0:11:15.04:0,15,270	0/0:38,0:38:53.80:0,54,951	1/1:7,0:7:8.82:112,9,0	0/0:26,0:25:24.30:0,24,915	1/1:13,0:12:20.45:297,20,0	0/0:5,0:5:3.48:0,3,78
chr10	36980218	.	TGTGTGTGTGTGTGGGTGG	T	2248.66	PASS	AB=0.944;AC=26;AF=0.464;AN=56;BaseQRankSum=7.204;DP=600;FS=1.621;HRun=0;HaplotypeScore=230.9398;InbreedingCoeff=0.3684;MQ=54.17;MQ0=30;MQRankSum=-0.674;QD=6.61;ReadPosRankSum=-2.364;VQSLOD=1.8448;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:21.73:0,22,662	1/1:10,0:10:9.03:207,9,0	0/1:41,0:13:44.75:45,0,167	0/1:48,0:14:13.38:13,0,103	0/0:17,0:17:6.30:0,6,469	0/1:28,0:28:27.48:27,0,592	0/0:28,0:26:36.07:0,36,588	1/1:23,0:22:44.51:491,45,0	0/0:26,0:24:61.07:0,61,2693	0/1:34,0:31:43.47:43,0,632	0/0:21,0:21:34.39:0,34,446	0/1:15,0:15:26.86:27,0,366	0/1:3,13:15:0:0,0,0	1/1:14,0:12:21.05:290,21,0	0/1:22,0:21:95.71:96,0,221	0/0:15,0:15:13.73:0,14,1031	0/0:32,0:30:67.19:0,67,3164	0/1:16,0:16:52.18:52,0,406	1/1:16,0:15:27.02:338,27,0	1/1:10,0:9:3.01:56,3,0	1/1:14,0:12:8.70:140,9,0	1/1:3,11:13:3.48:126,3,0	0/0:9,0:9:15.04:0,15,235	0/0:42,0:41:53.66:0,54,689	1/1:7,0:7:9.03:150,9,0	0/0:26,0:25:18.12:0,18,454	1/1:12,0:11:20.52:338,21,0	0/0:6,0:6:6.49:0,6,114
chr10	36980230	.	TGGGTGG	T	3075.11	PASS	AB=1.000;AC=30;AF=0.536;AN=56;BaseQRankSum=7.268;DP=613;FS=34.838;HRun=0;HaplotypeScore=131.8181;InbreedingCoeff=0.1439;MQ=52.20;MQ0=59;MQRankSum=0.102;QD=7.10;ReadPosRankSum=-2.249;VQSLOD=0.7419;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:40,0:39:8.98:9,0,615	1/1:8,0:7:9.03:123,9,0	0/1:36,0:8:44.90:45,0,165	0/1:42,0:9:12.85:13,0,104	0/0:13,0:15:7.18:0,7,304	0/1:28,0:26:38.67:39,0,473	0/1:22,0:20:6.33:6,0,536	1/1:3,15:16:45.10:556,45,0	0/0:28,0:25:31.38:0,31,1261	0/1:35,0:31:99:286,0,557	0/0:21,0:21:39.42:0,39,455	0/1:15,0:15:58.66:59,0,355	0/0:16,0:14:0:0,0,0	1/1:14,0:11:26.54:354,27,0	0/1:25,0:22:0.94:1,0,222	0/0:15,0:17:31.68:0,32,566	0/0:35,0:32:73.03:0,73,1410	0/1:15,0:15:54.46:54,0,368	1/1:6,13:13:39.03:472,39,0	1/1:3,14:15:3.01:36,3,0	1/1:20,0:14:11.67:190,12,0	1/1:13,0:11:2.99:24,3,0	0/1:7,0:7:31.81:32,0,186	0/0:45,0:44:53.59:0,54,689	1/1:9,0:8:18.06:298,18,0	0/1:27,0:25:50.59:170,0,51	1/1:18,0:17:35.78:484,36,0	0/1:5,0:4:0.80:1,0,1
chr10	36980236	.	GGTGTGTGTGTGTGT	G	3452.58	PASS	AB=0.895;AC=25;AF=0.481;AN=52;BaseQRankSum=4.992;DP=621;FS=0.000;HRun=0;HaplotypeScore=191.1358;InbreedingCoeff=0.4400;MQ=50.62;MQ0=66;MQRankSum=-1.200;QD=10.34;ReadPosRankSum=0.620;VQSLOD=2.6461;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:22,18:38:5.99:179,6,0	1/1:8,0:7:3.01:89,3,0	./.	./.	0/0:16,0:14:11.93:0,12,308	0/1:13,13:25:16.72:445,0,17	1/1:25,0:22:11.72:223,12,0	0/0:21,0:16:7.74:0,8,33	0/0:24,0:22:35.11:0,35,1693	1/1:18,19:33:40.14:820,40,0	1/1:13,8:21:4.25:34,4,0	1/1:13,0:14:11.42:230,11,0	0/0:16,0:14:0:0,0,0	0/0:17,0:13:10.76:0,11,67	1/1:8,14:21:18.05:515,18,0	0/0:17,0:16:23.53:0,24,827	0/0:29,0:32:54.52:0,55,2326	0/1:14,4:18:3.51:605,0,4	0/0:20,0:14:2.76:0,3,125	0/0:18,0:16:2.90:0,3,50	0/1:21,0:14:0:0,0,0	1/1:13,0:11:3.48:54,3,0	0/1:9,0:9:36.65:68,0,37	1/1:25,0:44:3:29,3,0	0/0:14,0:13:21.03:0,21,243	0/1:27,0:25:99:120,0,102	0/0:20,0:19:18.24:0,18,289	1/1:5,0:4:2.98:43,3,0
chr10	36983976	.	G	GA	4192.94	PASS	AB=0.556;AC=19;AF=0.339;AN=56;BaseQRankSum=3.812;DP=616;FS=5.646;HRun=10;HaplotypeScore=76.2605;InbreedingCoeff=0.9311;MQ=65.15;MQ0=5;MQRankSum=-2.027;QD=19.97;ReadPosRankSum=-1.539;VQSLOD=4.0097;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:89.87:0,90,739	1/1:5,8:13:20.56:223,21,0	0/0:17,0:11:4.80:0,5,124	0/0:14,0:9:11.50:0,12,99	0/0:31,0:31:72.42:0,72,606	0/0:16,0:16:35.93:0,36,295	0/0:16,0:16:38.86:0,39,311	1/1:17,17:33:57.12:592,57,0	0/0:13,0:13:35.94:0,36,295	0/0:36,1:38:62.84:0,63,701	0/0:28,0:28:68.85:0,69,559	0/0:18,2:20:25.01:0,25,411	1/1:1,18:19:42.11:447,42,0	1/1:0,15:15:42.11:447,42,0	0/0:20,0:20:53.86:0,54,433	0/0:14,0:14:38.95:0,39,320	0/0:38,0:37:60.97:0,61,702	0/0:17,0:17:41.91:0,42,339	1/1:5,21:26:22.73:635,23,0	1/1:16,13:28:18.32:375,18,0	0/1:2,8:10:0.54:200,0,1	1/1:5,15:19:45.11:480,45,0	0/0:19,0:19:44.91:0,45,367	0/0:20,0:20:50.91:0,51,419	1/1:8,8:16:27.04:272,27,0	0/0:30,0:31:82.92:0,83,668	1/1:8,19:27:39.18:522,39,0	0/0:18,0:18:35.53:0,36,309
chr10	36985393	.	GCTGTGGCCATGCAGA	G	6071.74	PASS	AB=0.536;AC=5;AF=0.089;AN=56;BaseQRankSum=11.163;DP=734;FS=0.000;HRun=0;HaplotypeScore=295.3590;InbreedingCoeff=0.7798;MQ=76.45;MQ0=0;MQRankSum=-11.312;QD=89.29;ReadPosRankSum=1.862;VQSLOD=4.1321;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,123,8493	0/0:13,0:13:39.13:0,39,2906	0/0:15,0:15:30.10:0,30,1819	0/0:20,0:20:57.20:0,57,2651	0/0:27,0:27:75.26:0,75,4832	0/0:18,0:18:51.18:0,51,3682	0/0:35,0:35:99:0,105,6771	0/0:29,0:29:78.26:0,78,5189	0/0:34,0:34:96.33:0,96,6821	0/0:32,0:32:87.30:0,87,5695	0/0:14,0:14:42.14:0,42,2638	0/1:4,26:30:99:2861,0,152	0/0:36,0:36:99:0,105,7241	0/0:35,0:35:99:0,99,6913	0/0:21,0:21:63.22:0,63,4362	0/0:20,0:20:60.21:0,60,3936	0/0:31,0:31:87.30:0,87,6389	0/0:39,0:39:99:0,114,7930	0/0:26,0:26:72.25:0,72,4642	0/0:13,0:13:39.13:0,39,2682	0/0:58,0:58:99:0,166,11408	0/0:22,0:22:66.19:0,66,3933	1/1:1,17:18:42.14:1872,42,0	1/1:5,15:20:30.57:1338,31,0	0/0:24,0:24:66.23:0,66,4675	0/0:31,0:31:87.29:0,87,5335	0/0:21,0:20:57.20:0,57,3914	0/0:11,0:11:33.11:0,33,2443
chr10	36985637	.	CAG	C	3046.05	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=10.248;DP=773;FS=0.450;HRun=0;HaplotypeScore=93.7310;InbreedingCoeff=0.9998;MQ=91.92;MQ0=2;MQRankSum=-3.608;QD=37.15;ReadPosRankSum=3.138;VQSLOD=6.0036;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:57:99:0,166,3107	0/0:12,0:12:36.12:0,36,686	0/0:39,0:39:99:0,107,1939	0/0:27,0:27:78.25:0,78,1339	0/0:22,0:22:63.20:0,63,1173	0/0:24,0:24:69.24:0,69,1310	0/0:33,0:33:93.32:0,93,1770	0/0:35,0:35:99:0,99,1862	0/0:24,0:24:72.23:0,72,1347	0/0:17,0:17:51.12:0,51,912	0/0:16,0:16:48.16:0,48,898	1/1:2,26:27:72.24:1100,72,0	0/0:33,0:33:99:0,99,1900	0/0:29,0:29:87.28:0,87,1625	0/0:29,0:29:84.27:0,84,1569	0/0:31,0:31:93.28:0,93,1683	0/0:25,0:25:75.18:0,75,1296	0/0:25,0:25:72.23:0,72,1355	0/0:26,0:26:78.24:0,78,1392	0/0:25,0:25:75.24:0,75,1405	0/0:45,0:45:99:0,129,2404	0/0:21,0:21:60.19:0,60,1125	1/1:0,13:13:32.58:502,33,0	1/1:1,40:40:53.47:1587,53,0	0/0:19,0:19:57.20:0,57,1078	0/0:32,0:32:96.33:0,96,1829	0/0:31,0:29:90.29:0,90,1701	0/0:14,0:14:39.13:0,39,751
chr10	36987366	.	C	CA	4053.08	PASS	AB=0.917;AC=39;AF=0.696;AN=56;BaseQRankSum=-0.418;DP=523;FS=0.458;HRun=13;HaplotypeScore=80.6456;InbreedingCoeff=0.7564;MQ=67.54;MQ0=5;MQRankSum=-1.508;QD=10.95;ReadPosRankSum=-1.984;VQSLOD=2.8285;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:19,26:46:46.20:723,46,0	1/1:1,1:8:14.36:85,14,0	0/0:19,0:11:20.02:0,20,119	0/0:11,0:11:3.63:0,4,22	0/0:20,1:22:5.69:0,6,290	1/1:5,16:22:29.71:251,30,0	1/1:3,11:15:3.87:199,4,0	1/1:8,1:23:41.37:242,41,0	0/0:13,0:14:22.74:0,23,150	1/1:9,12:21:33.82:288,34,0	1/1:4,15:19:36.04:334,36,0	0/0:21,0:21:8.27:0,8,179	1/1:10,0:10:21.84:117,22,0	1/1:5,1:18:17.21:99,17,0	1/1:2,16:18:29.98:270,30,0	0/1:10,1:11:4.06:4,0,120	0/0:25,0:26:51.57:0,52,340	1/1:10,18:27:37.25:319,37,0	1/1:7,1:19:39.68:221,40,0	1/1:5,3:10:14.96:92,15,0	1/1:4,1:19:18.09:102,18,0	1/1:3,0:15:23.16:132,23,0	0/0:24,0:25:34.10:0,34,231	0/0:13,0:13:11.66:0,12,82	1/1:1,1:23:34.66:177,35,0	1/1:4,8:13:6.25:181,6,0	1/1:9,1:21:0.67:82,1,0	1/1:2,6:9:0.28:133,0,0
chr10	36988055	.	CAG	C	2932.50	PASS	AB=0.954;AC=24;AF=0.429;AN=56;BaseQRankSum=11.816;DP=1283;FS=22.849;HRun=0;HaplotypeScore=475.4279;InbreedingCoeff=-0.5549;MQ=33.49;MQ0=82;MQRankSum=-7.277;QD=2.72;ReadPosRankSum=2.360;VQSLOD=0.2698;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:57,3:52:99:105,0,119	0/1:16,0:14:20.57:60,0,21	0/0:43,0:7:13.57:0,14,136	0/0:59,0:16:21.15:0,21,230	0/1:21,0:21:5.37:5,0,257	0/1:25,3:29:65.12:65,0,108	0/1:48,9:56:99:152,0,135	0/1:86,0:62:99:166,0,529	0/0:36,0:35:53.14:0,53,674	0/1:85,4:78:99:751,0,287	0/1:21,4:25:49.53:95,0,50	0/1:58,7:64:99:160,0,152	0/1:37,0:33:19.62:132,0,20	0/1:30,3:30:14.27:90,0,14	0/1:47,8:53:87.16:226,0,87	0/0:26,0:26:25.64:0,26,563	0/0:40,0:40:59.62:0,60,1064	0/1:41,0:35:99:296,0,124	0/1:50,1:30:99:211,0,158	0/1:37,1:33:14.58:33,0,15	0/1:80,2:55:10.12:10,0,56	0/1:64,5:56:0.81:95,0,1	0/1:46,4:47:53.73:74,0,54	0/1:51,2:50:4.97:5,0,112	1/1:40,1:37:3.40:95,3,0	0/1:28,0:25:49.80:50,0,305	0/1:39,1:39:67.88:191,0,68	0/1:4,0:4:20.91:21,0,33
chr10	36988065	.	CCAT	C	2385.19	PASS	AB=0.918;AC=18;AF=0.321;AN=56;BaseQRankSum=7.339;DP=1241;FS=6.005;HRun=0;HaplotypeScore=493.1427;InbreedingCoeff=-0.4532;MQ=32.81;MQ0=79;MQRankSum=-5.423;QD=2.80;ReadPosRankSum=-2.731;VQSLOD=-0.0060;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:54,4:50:99:121,0,640	0/1:6,4:13:59.21:149,0,59	0/0:51,0:7:21.07:0,21,451	0/0:67,0:17:43.66:0,44,830	0/0:18,0:18:45.01:0,45,884	0/1:28,2:31:37.03:37,0,579	0/0:48,3:52:31.85:0,32,1066	0/1:69,0:50:36.08:36,0,1975	0/0:26,0:26:61.09:0,61,1459	0/1:72,7:74:99:577,0,2105	0/1:16,6:24:99:114,0,218	0/1:60,3:70:99:239,0,918	0/1:31,3:33:99:306,0,148	0/1:30,3:31:41.96:42,0,170	0/1:52,4:55:0.57:1,0,659	0/0:21,0:21:48.03:0,48,1105	0/0:36,0:36:99:0,102,2225	0/1:33,8:35:99:379,0,820	0/1:50,1:28:63.84:64,0,635	0/1:23,2:28:53.69:54,0,120	0/0:73,4:57:15.17:0,15,269	0/1:43,6:50:39.63:46,0,40	0/1:42,2:45:13.79:14,0,229	0/1:42,3:48:8.71:9,0,422	0/1:26,3:32:28.41:35,0,28	0/0:30,0:27:78.17:0,78,1646	0/1:30,5:38:99:321,0,613	0/0:4,0:4:12:0,12,241
chr10	36988078	.	G	GACAC	3627.54	PASS	AB=0.904;AC=17;AF=0.304;AN=56;BaseQRankSum=9.599;DP=1186;FS=14.515;HRun=0;HaplotypeScore=505.3731;InbreedingCoeff=-0.2776;MQ=38.01;MQ0=50;MQRankSum=-9.452;QD=4.55;ReadPosRankSum=-3.823;VQSLOD=-0.1997;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:56,2:53:48.90:49,0,492	0/0:13,0:12:5.59:0,6,66	0/0:55,0:9:5.67:0,6,117	0/0:67,0:21:16.22:0,16,204	0/0:18,0:18:33.11:0,33,574	0/1:26,5:30:99:323,0,298	0/1:51,4:56:99:248,0,662	0/1:70,1:46:45.82:46,0,395	0/0:29,0:29:68.93:0,69,1034	0/1:70,9:74:99:706,0,1421	0/0:17,3:20:7.17:0,7,156	0/1:58,5:62:99:332,0,830	1/1:20,6:30:28.57:663,29,0	0/1:28,3:34:33.70:240,0,34	0/1:53,5:57:99:119,0,529	0/0:20,0:20:48.15:0,48,809	0/0:35,0:35:84.24:0,84,1357	0/1:32,2:32:99:234,0,397	0/1:42,0:23:81.70:160,0,82	0/1:25,1:24:3.60:4,0,34	0/1:74,0:60:1.70:2,0,126	0/1:45,5:48:33.23:155,0,33	0/0:40,3:40:12.61:0,13,155	0/0:45,3:45:5.24:0,5,369	0/1:26,3:34:59.37:99,0,59	0/0:34,0:31:52.55:0,53,846	0/1:30,4:34:99:248,0,184	0/0:4,0:4:12.03:0,12,183
chr10	36988086	.	CAGA	C	288.80	PASS	AB=0.816;AC=4;AF=0.071;AN=56;BaseQRankSum=4.333;DP=1151;FS=32.986;HRun=0;HaplotypeScore=497.1634;InbreedingCoeff=-0.0957;MQ=38.62;MQ0=33;MQRankSum=-4.779;QD=1.88;ReadPosRankSum=-1.362;VQSLOD=-0.4205;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:52,11:59:23.25:0,23,840	0/0:13,0:12:6.10:0,6,96	0/0:50,0:9:18.06:0,18,379	0/0:65,0:23:15.26:0,15,618	0/0:16,0:16:33.11:0,33,812	0/0:30,0:30:63.01:0,63,1021	0/0:51,3:54:46.76:0,47,1381	0/0:74,0:51:99:0,107,2227	0/0:31,0:31:78.74:0,79,1853	0/0:77,3:74:99:0,127,3371	0/0:20,1:21:12.30:0,12,275	0/0:56,5:60:89.66:0,90,1570	0/0:28,3:29:9.53:0,10,679	0/0:27,7:33:8.87:0,9,260	0/0:52,8:58:54.85:0,55,1124	0/0:21,0:21:54.18:0,54,1306	0/0:30,0:30:87.30:0,87,2064	0/1:32,6:36:99:117,0,870	0/0:33,3:20:5.89:0,6,847	0/0:17,3:19:7.53:0,8,121	0/0:70,6:60:18.06:0,18,393	0/0:48,7:49:11:0,11,259	0/0:35,0:34:26.04:0,26,378	0/1:41,8:45:6.97:7,0,439	0/0:34,2:35:14.14:0,14,302	0/1:25,9:32:99:173,0,1096	0/1:22,11:33:97.04:97,0,531	0/0:4,0:4:12.04:0,12,284
chr10	36988116	.	ACC	A	6233.14	PASS	AB=0.750;AC=22;AF=0.393;AN=56;BaseQRankSum=6.237;DP=1024;FS=7.269;HRun=3;HaplotypeScore=330.5783;InbreedingCoeff=-0.3741;MQ=44.80;MQ0=19;MQRankSum=-3.721;QD=8.85;ReadPosRankSum=3.394;VQSLOD=1.0780;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:25,44:67:99:608,0,421	0/1:8,2:10:41.60:42,0,163	0/0:44,0:20:47.25:0,47,589	0/0:54,0:29:22.75:0,23,678	0/0:28,0:28:83.81:0,84,1175	0/1:15,6:21:99:158,0,168	0/1:26,24:50:99:703,0,559	0/1:63,13:50:99:341,0,1363	0/0:39,0:39:99:0,105,1875	0/1:31,15:44:99:722,0,721	1/1:2,9:11:8.73:128,9,0	0/1:35,16:50:99:451,0,693	0/1:17,7:26:99:189,0,273	0/1:14,7:21:51.80:59,0,52	0/1:22,32:54:78.08:78,0,489	0/0:24,0:24:69.12:0,69,1184	0/0:33,0:33:80.69:0,81,1804	0/1:22,12:32:99:707,0,245	0/1:38,4:24:99:128,0,540	0/1:16,3:19:25.21:25,0,172	0/0:52,13:55:4.11:0,4,295	0/1:28,9:36:36.20:36,0,139	0/1:21,3:22:99:119,0,155	0/1:27,21:45:99:344,0,145	0/0:25,4:28:26.10:0,26,521	0/1:11,22:31:99:884,0,282	1/1:8,12:23:40.56:432,41,0	0/1:3,4:7:76.52:77,0,157
chr10	36988118	.	CCA	C	2436.29	PASS	AB=0.988;AC=20;AF=0.357;AN=56;BaseQRankSum=7.223;DP=993;FS=2.502;HRun=0;HaplotypeScore=321.1853;InbreedingCoeff=-0.2584;MQ=45.50;MQ0=15;MQRankSum=-3.191;QD=3.77;ReadPosRankSum=6.865;VQSLOD=1.5892;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:66,1:65:99:269,0,379	0/0:10,0:10:1.81:0,2,244	0/0:42,0:20:44.74:0,45,755	0/0:57,1:30:38.82:0,39,867	0/0:30,0:30:84.11:0,84,1335	0/1:18,0:18:40.64:41,0,157	0/1:46,1:47:99:294,0,528	0/1:79,0:54:51.98:52,0,1401	0/0:38,0:38:99:0,99,1867	0/1:43,1:42:99:303,0,805	1/1:11,0:11:8.94:69,9,0	0/1:49,0:48:99:193,0,681	0/1:25,0:24:95.15:95,0,258	0/1:17,0:16:14.85:15,0,50	0/1:52,0:52:2.08:2,0,518	0/0:25,0:25:72.23:0,72,1317	0/0:35,0:35:91.31:0,91,1863	0/1:32,2:32:99:355,0,234	0/1:41,0:24:45.58:46,0,451	0/0:18,1:18:8.96:0,9,165	0/0:62,0:53:18.04:0,18,272	0/1:29,2:30:8.05:8,0,105	0/1:20,0:19:47.27:47,0,156	0/1:50,1:47:99:155,0,143	0/0:27,0:26:36.86:0,37,457	0/1:32,0:30:99:419,0,303	1/1:21,0:21:15.12:210,15,0	0/1:7,0:7:30.61:31,0,125
chr10	36988143	.	T	TCA	1857.08	PASS	AB=0.706;AC=18;AF=0.321;AN=56;BaseQRankSum=5.305;DP=892;FS=31.989;HRun=0;HaplotypeScore=305.3092;InbreedingCoeff=0.7550;MQ=44.50;MQ0=12;MQRankSum=-7.446;QD=7.55;ReadPosRankSum=-2.253;VQSLOD=1.9393;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:70,0:70:39.98:0,40,814	1/1:6,5:12:14.78:183,15,0	0/0:36,0:20:20.87:0,21,257	0/0:49,0:24:33.51:0,34,361	0/0:31,0:31:66.06:0,66,847	0/0:12,0:12:5.85:0,6,77	0/0:46,0:46:78.22:0,78,970	1/1:23,23:31:18.79:817,19,0	0/0:35,0:35:78.13:0,78,987	0/0:47,0:45:81.24:0,81,1007	0/0:14,0:14:8.47:0,8,114	0/0:45,0:44:72.11:0,72,932	0/1:8,7:15:16.69:189,0,17	1/1:10,4:14:5.70:71,6,0	0/0:49,0:50:16.24:0,16,364	0/0:32,0:32:78.25:0,78,1002	0/0:37,0:37:90.50:0,91,1191	0/0:37,0:37:32.30:0,32,962	1/1:13,3:11:3.24:200,3,0	1/1:16,6:20:12:161,12,0	1/1:50,13:57:8.53:148,9,0	0/1:12,6:18:0.23:0,0,0	0/0:19,0:18:39.01:0,39,473	0/0:42,0:38:24.18:0,24,373	1/1:15,9:23:0.28:2,0,0	0/0:35,0:35:81.63:0,82,987	1/1:11,3:15:20.39:266,20,0	0/0:7,0:7:12.04:0,12,154
chr10	36988144	.	C	CAG	877.75	PASS	AB=0.985;AC=11;AF=0.196;AN=56;BaseQRankSum=5.691;DP=909;FS=30.569;HRun=0;HaplotypeScore=317.6682;InbreedingCoeff=0.1957;MQ=45.11;MQ0=12;MQRankSum=-6.451;QD=3.78;ReadPosRankSum=0.621;VQSLOD=1.4237;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:67,3:70:41.92:0,42,1023	0/1:12,0:12:61.40:73,0,61	0/0:36,0:19:39.90:0,40,480	0/0:51,0:24:40.29:0,40,613	0/0:32,0:32:65.97:0,66,1005	0/0:12,1:13:13.90:0,14,134	0/0:46,0:46:89.07:0,89,1247	0/1:47,0:32:94.45:375,0,94	0/0:34,0:34:84.16:0,84,1238	0/0:48,0:46:99:0,117,1511	0/0:14,0:14:11.68:0,12,162	0/0:44,1:44:77.98:0,78,1197	0/1:15,0:17:40.96:112,0,41	1/1:14,1:16:5.60:72,6,0	0/0:49,2:51:11.38:0,11,468	0/0:32,0:32:90.24:0,90,1290	0/0:37,0:37:99:0,105,1529	0/0:38,0:38:82.66:0,83,1325	0/1:16,0:11:78.66:85,0,79	0/1:25,0:23:34.49:70,0,34	0/1:64,0:58:6.54:66,0,7	0/1:20,0:19:0.26:0,0,1	0/0:20,0:19:41.35:0,41,600	0/0:42,0:39:24.18:0,24,450	0/0:24,0:23:12.50:0,13,78	0/0:36,0:36:98.44:0,98,1330	1/1:13,0:15:2.32:165,2,0	0/0:7,0:7:14.64:0,15,193
chr10	36988161	.	T	TCA	931.10	PASS	AB=0.937;AC=16;AF=0.286;AN=56;BaseQRankSum=9.449;DP=904;FS=15.742;HRun=0;HaplotypeScore=292.5283;InbreedingCoeff=0.6708;MQ=46.42;MQ0=11;MQRankSum=-6.583;QD=3.61;ReadPosRankSum=-5.755;VQSLOD=0.1956;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:71,0:71:88.45:0,88,1155	1/1:7,4:11:17.27:222,17,0	0/0:33,0:12:13.80:0,14,177	0/0:42,0:18:19.57:0,20,193	0/0:31,0:31:62.92:0,63,778	0/0:10,0:10:11.96:0,12,149	0/0:47,0:47:81.37:0,81,1013	0/1:41,3:32:45.74:181,0,46	0/0:36,0:37:69.08:0,69,843	0/0:46,0:46:99:0,102,1270	0/0:18,0:18:11.57:0,12,146	0/0:40,0:39:80.55:0,81,1010	1/1:21,1:22:35.26:244,35,0	1/1:20,0:20:19.72:104,20,0	0/0:52,0:52:48.18:0,48,634	0/0:32,0:32:75.21:0,75,926	0/0:39,0:38:99:0,100,1215	0/0:42,0:42:54.27:0,54,1116	0/1:19,0:11:69.16:77,0,69	1/1:19,6:24:19.02:146,19,0	0/1:66,1:65:9.27:36,0,9	0/1:15,4:19:0.24:1,0,0	0/0:20,0:20:51.13:0,51,610	0/0:51,0:48:38.84:0,39,540	1/1:12,8:19:6.05:29,6,0	0/0:29,0:29:63.03:0,63,763	1/1:11,0:11:13.07:76,13,0	0/0:6,0:6:12.04:0,12,151
chr10	36988174	.	G	GAC	4133.71	PASS	AB=0.800;AC=19;AF=0.339;AN=56;BaseQRankSum=3.189;DP=971;FS=5.176;HRun=0;HaplotypeScore=271.8608;InbreedingCoeff=0.9446;MQ=46.96;MQ0=13;MQRankSum=-7.384;QD=13.33;ReadPosRankSum=-5.129;VQSLOD=2.1202;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:71,0:71:99:0,129,1595	1/1:6,5:11:18.06:264,18,0	0/0:39,0:15:32.49:0,32,350	0/0:42,0:16:24:0,24,248	0/0:32,0:32:65.96:0,66,842	0/0:11,0:11:14.97:0,15,189	0/0:44,0:44:70:0,70,1063	1/1:12,38:42:81.38:1283,81,0	0/0:36,0:36:90.17:0,90,1150	0/0:45,0:45:99:0,114,1441	0/0:23,0:23:23.61:0,24,306	0/0:44,0:44:93.07:0,93,1164	1/1:7,16:24:42.13:676,42,0	1/1:2,20:23:20.72:355,21,0	0/0:47,0:47:51:0,51,653	0/0:29,0:29:75.24:0,75,985	0/0:37,0:36:99:0,102,1315	0/0:44,0:45:36.27:0,36,1259	1/1:15,9:13:27.09:417,27,0	1/1:3,34:37:27.09:433,27,0	1/1:21,57:78:24.05:396,24,0	0/1:21,7:26:0.28:0,0,0	0/0:20,0:20:48.04:0,48,615	0/0:57,0:54:54.58:0,55,771	1/1:12,10:21:8.78:108,9,0	0/0:30,0:30:74.90:0,75,969	1/1:4,5:9:9.93:201,10,0	0/0:6,0:6:12.04:0,12,157
chr10	36988273	.	ACACT	A	5806.08	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=10.336;DP=918;FS=9.228;HRun=0;HaplotypeScore=254.7663;InbreedingCoeff=0.9631;MQ=49.02;MQ0=23;MQRankSum=-4.380;QD=23.22;ReadPosRankSum=-2.855;VQSLOD=2.9710;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,105,2496	1/1:4,4:6:9.03:170,9,0	0/0:57,0:13:26.85:0,27,341	0/0:82,0:26:41.74:0,42,621	0/0:24,0:24:50.44:0,50,1138	0/0:19,0:19:23.75:0,24,642	0/0:43,0:43:99:0,108,2565	1/1:7,22:17:38.27:479,38,0	0/0:34,0:34:80.29:0,80,1884	0/0:45,0:42:99:0,120,2952	0/0:16,0:16:26.79:0,27,678	0/0:40,0:40:65.27:0,65,1515	1/1:11,12:23:26.11:410,26,0	1/1:11,11:22:29.99:486,30,0	0/0:43,0:43:61.97:0,62,1537	0/0:32,0:32:66.15:0,66,1552	0/0:30,0:30:87.24:0,87,2152	0/0:35,0:35:62.69:0,63,2166	1/1:7,4:7:18.03:302,18,0	1/1:7,9:15:3.84:362,4,0	1/1:32,39:71:99:2038,122,0	1/1:16,9:23:21.49:383,21,0	0/0:20,0:19:38.60:0,39,918	0/0:61,0:61:99:0,104,2575	1/1:10,9:16:27.02:462,27,0	0/0:31,0:31:81.26:0,81,1848	1/1:1,25:26:39.13:713,39,0	0/0:7,0:7:15.05:0,15,363
chr10	36988345	.	TCA	T	5163.12	PASS	AB=0.875;AC=34;AF=0.630;AN=54;BaseQRankSum=4.680;DP=822;FS=16.618;HRun=0;HaplotypeScore=149.2476;InbreedingCoeff=0.6352;MQ=42.01;MQ0=62;MQRankSum=-0.669;QD=10.18;ReadPosRankSum=2.469;VQSLOD=3.6102;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:24,24:48:78.06:888,78,0	./.	0/0:79,0:12:7.45:0,7,35	0/0:72,0:10:2.99:0,3,24	0/1:21,2:23:2.12:2,0,431	1/1:4,17:20:20.92:247,21,0	1/1:15,30:43:65.90:750,66,0	0/0:34,0:30:2.92:0,3,29	0/0:31,0:29:54.18:0,54,850	1/1:8,20:27:46.38:528,46,0	1/1:6,10:15:15:176,15,0	1/1:7,1:28:42.75:230,43,0	1/1:4,0:19:22.73:112,23,0	1/1:6,0:10:8.49:41,8,0	1/1:8,24:29:51.15:600,51,0	0/0:23,0:22:47.98:0,48,712	0/0:35,1:30:39.26:0,39,785	1/1:13,12:26:15.33:439,15,0	1/1:14,0:11:6.15:29,6,0	0/1:12,0:9:0.10:0,0,0	0/1:34,0:41:11.18:14,0,11	0/1:16,0:14:0.33:0,0,0	1/1:7,0:21:24.88:124,25,0	1/1:14,0:56:73.86:362,74,0	0/0:14,0:10:0.25:0,0,1	1/1:10,20:27:3.32:476,3,0	0/0:12,0:13:2.98:0,3,22	1/1:0,6:6:12.04:141,12,0
chr10	36988578	.	C	CTCTG	3395.03	PASS	AC=12;AF=0.353;AN=34;BaseQRankSum=-1.751;DP=509;FS=11.069;HRun=0;HaplotypeScore=35.3478;InbreedingCoeff=0.7581;MQ=24.29;MQ0=170;MQRankSum=-2.452;QD=34.29;ReadPosRankSum=-0.815;VQSLOD=1.9778;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	1/1:2,4:6:15.05:401,15,0	./.	./.	0/0:21,0:21:18.06:0,18,341	0/0:17,0:6:6.02:0,6,114	0/0:22,0:9:9.03:0,9,153	./.	0/0:12,0:9:3.01:0,3,39	0/0:35,0:28:75.26:0,75,1423	0/0:18,0:15:24.08:0,24,455	./.	./.	./.	./.	./.	0/0:30,0:15:3.01:0,3,57	0/0:17,0:12:3.01:0,3,57	1/1:6,10:3:9.02:187,9,0	1/1:1,21:18:39.13:1036,39,0	./.	1/1:3,13:12:18.06:484,18,0	0/0:18,0:17:24.08:0,24,455	./.	1/1:2,19:21:45.15:1207,45,0	0/0:19,0:10:24.08:0,24,453	1/1:4,8:4:3.01:81,3,0	0/0:11,0:9:9.03:0,9,171
chr10	36989946	.	G	GTGGTTGGT	7944.71	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-6.058;DP=716;FS=13.528;HRun=0;HaplotypeScore=179.1047;InbreedingCoeff=0.9689;MQ=69.77;MQ0=1;MQRankSum=-11.401;QD=35.95;ReadPosRankSum=-4.166;VQSLOD=2.5374;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:57:71.58:0,72,2724	1/1:5,10:15:27.09:1059,27,0	0/0:33,0:24:9.03:0,9,186	0/0:25,0:21:21.07:0,21,491	0/0:28,0:28:63.19:0,63,1479	0/0:39,0:39:78.25:0,78,1828	0/0:25,0:25:16.94:0,17,845	1/1:30,0:28:27.04:536,27,0	0/0:24,0:24:51.18:0,51,1280	0/0:32,0:32:60.21:0,60,1480	0/0:23,0:23:36.10:0,36,805	0/0:7,0:28:48.12:0,48,820	1/1:9,9:22:27.09:1041,27,0	1/1:12,3:16:21.07:676,21,0	0/0:24,0:24:54.19:0,54,1360	0/0:20,0:20:30.10:0,30,744	0/0:37,0:38:64.72:0,65,1448	0/0:23,0:23:39.13:0,39,964	1/1:17,2:19:7.27:186,7,0	1/1:14,11:25:36.12:1326,36,0	1/1:22,0:21:22:410,22,0	1/1:12,10:23:30.10:1207,30,0	0/0:9,0:20:32.99:0,33,615	0/0:13,0:34:54.19:0,54,1006	1/1:15,5:21:18.05:570,18,0	0/0:15,0:15:27.09:0,27,680	1/1:14,7:28:24.08:934,24,0	0/0:7,0:7:12.04:0,12,302
chr10	36990604	.	TACACAC	T	2274.85	PASS	AB=0.685;AC=22;AF=0.423;AN=52;BaseQRankSum=8.376;DP=668;FS=0.615;HRun=0;HaplotypeScore=156.9976;InbreedingCoeff=0.7924;MQ=61.74;MQ0=10;MQRankSum=-6.151;QD=9.36;ReadPosRankSum=1.765;VQSLOD=2.8635;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:41:48.16:0,48,1397	1/1:10,2:13:11.97:176,12,0	./.	./.	0/0:15,0:15:21.07:0,21,562	0/0:26,0:28:41.32:0,41,1173	0/0:24,0:26:36.12:0,36,1030	1/1:25,0:25:3.01:40,3,0	0/0:20,0:20:36.12:0,36,1076	0/0:23,0:25:60.20:0,60,1620	0/0:16,0:16:33.11:0,33,1037	0/0:29,0:31:44.98:0,45,1284	1/1:8,9:17:12.04:245,12,0	1/1:9,12:20:21.07:412,21,0	0/0:32,0:31:60.21:0,60,1682	0/0:22,0:24:42.14:0,42,1122	0/0:33,0:35:48.18:0,48,1354	0/0:18,0:22:37.01:0,37,923	1/1:14,2:14:4.71:120,5,0	1/1:12,7:20:12.04:220,12,0	1/1:39,4:40:12:205,12,0	1/1:13,10:25:5.61:101,6,0	0/0:19,0:19:39.13:0,39,1103	0/0:26,0:27:47.29:0,47,1175	1/1:8,9:19:24.06:411,24,0	0/1:14,0:20:42.80:57,0,43	1/1:14,4:18:24.08:484,24,0	0/1:2,0:6:0.23:0,0,90
chr10	36990700	.	TAGTC	T	9872.73	PASS	AB=0.524;AC=19;AF=0.339;AN=56;BaseQRankSum=15.957;DP=648;FS=1.436;HRun=0;HaplotypeScore=117.3010;InbreedingCoeff=0.9204;MQ=86.34;MQ0=1;MQRankSum=-7.103;QD=44.67;ReadPosRankSum=1.178;VQSLOD=5.5708;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:78.25:0,78,1995	1/1:0,11:11:27.06:461,27,0	0/0:22,0:22:60.18:0,60,1223	0/0:31,0:30:68.94:0,69,1555	0/0:23,0:22:66.23:0,66,1781	0/0:18,0:18:54.19:0,54,1444	0/0:19,0:19:54.19:0,54,1433	1/1:7,35:42:99:1679,99,0	0/0:27,0:27:75.26:0,75,2010	0/0:28,0:28:78.05:0,78,2024	0/0:24,0:24:69.24:0,69,1799	0/0:24,0:24:72.25:0,72,1875	1/1:0,21:21:57.15:1024,57,0	1/1:1,15:16:42.14:793,42,0	0/0:36,0:36:99:0,108,2861	0/0:18,0:18:54.19:0,54,1428	0/0:25,0:25:75.21:0,75,1884	0/0:22,0:22:63.22:0,63,1651	1/1:1,16:17:45.15:841,45,0	1/1:0,28:28:75.12:1339,75,0	1/1:1,14:15:24.08:455,24,0	0/1:2,20:21:20.85:947,0,21	0/0:26,0:26:75.26:0,75,1948	0/0:20,0:20:60.21:0,60,1618	1/1:1,25:26:63.22:1196,63,0	0/0:29,0:29:87.30:0,87,2327	1/1:1,22:23:60.21:1139,60,0	0/0:9,0:9:27.07:0,27,671
chr10	36991099	.	TTTTTTTTTCC	T	1544.80	PASS	AB=0.650;AC=3;AF=0.054;AN=56;BaseQRankSum=4.361;DP=622;FS=2.999;HRun=0;HaplotypeScore=191.2198;InbreedingCoeff=0.4508;MQ=62.67;MQ0=2;MQRankSum=-7.033;QD=40.65;ReadPosRankSum=1.944;VQSLOD=3.2979;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:58:99:0,148,6759	0/0:12,0:12:24.08:0,24,942	0/0:23,0:14:34.67:0,35,1186	0/0:25,0:9:9.03:0,9,267	0/0:18,0:18:34.36:0,34,1454	0/0:20,0:20:57.20:0,57,2634	0/0:20,0:20:51.18:0,51,2435	0/0:24,0:24:54.19:0,54,2239	0/0:30,0:30:81.28:0,81,3858	0/0:28,0:28:69.24:0,69,2890	0/0:15,0:15:42.13:0,42,1829	0/0:15,0:15:30.10:0,30,1469	0/0:19,0:19:45.15:0,45,1706	0/0:14,0:14:27.09:0,27,1113	0/0:20,0:20:51.18:0,51,2390	0/0:20,0:20:57.20:0,57,2656	0/0:40,0:40:99:0,105,4837	0/0:30,0:30:75.26:0,75,3542	0/0:17,0:17:42.14:0,42,1583	0/0:16,0:16:33.07:0,33,1358	0/0:23,0:23:51.15:0,51,1914	0/0:14,0:14:27.08:0,27,1032	0/0:14,0:14:35.95:0,36,1417	0/0:31,0:31:75.26:0,75,3505	0/0:21,0:21:45.15:0,45,1842	0/1:12,14:26:71.66:1548,0,72	0/0:17,0:17:45.15:0,45,1815	1/1:6,6:12:3.01:88,3,0
chr10	36991117	.	T	TC	4967.70	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=5.472;DP=643;FS=1.174;HRun=1;HaplotypeScore=79.5405;InbreedingCoeff=0.8900;MQ=57.20;MQ0=8;MQRankSum=-4.017;QD=23.32;ReadPosRankSum=-1.768;VQSLOD=4.3902;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,144,1795	1/1:1,11:12:15.80:203,16,0	0/1:20,0:9:35.83:36,0,54	0/0:30,0:4:6.02:0,6,76	0/0:15,0:15:42.13:0,42,528	0/0:26,0:26:69.13:0,69,815	0/0:27,0:27:72.20:0,72,909	1/1:4,26:30:68.91:812,69,0	0/0:25,0:25:69.15:0,69,840	0/0:28,0:28:69.17:0,69,852	0/0:16,0:16:32.07:0,32,470	0/0:16,0:16:45.12:0,45,544	1/1:2,18:20:42.14:582,42,0	1/1:1,22:23:36.12:507,36,0	0/0:27,0:27:72.16:0,72,830	0/0:23,0:23:62.90:0,63,724	0/0:37,0:37:96.28:0,96,1207	0/0:32,1:33:47.86:0,48,996	1/1:5,12:16:38.71:412,39,0	1/1:3,14:17:28.22:345,28,0	1/1:8,12:20:31.19:615,31,0	1/1:1,14:15:23.99:313,24,0	0/0:14,0:14:17.30:0,17,309	0/0:32,0:32:90.25:0,90,1107	1/1:5,14:19:42.14:592,42,0	0/0:23,0:23:67.89:0,68,459	1/1:0,19:19:39.13:550,39,0	0/0:7,0:7:5.93:0,6,40
chr10	36991951	.	T	TCC	30212.17	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-2.234;DP=786;FS=5.158;HRun=1;HaplotypeScore=114.0851;InbreedingCoeff=0.9999;MQ=86.38;MQ0=0;MQRankSum=-9.582;QD=52.09;ReadPosRankSum=2.421;VQSLOD=4.8012;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,40:47:99:2221,117,0	1/1:2,15:17:42.10:761,42,0	0/0:31,0:32:87.74:0,88,1273	0/0:29,0:29:84.26:0,84,1213	0/0:31,0:31:84.27:0,84,1266	1/1:0,38:38:96.33:1855,96,0	1/1:1,23:24:72.25:1389,72,0	1/1:9,34:45:99:2324,126,0	0/0:26,0:26:78.25:0,78,1174	1/1:0,26:26:78.27:1507,78,0	1/1:1,19:20:57.20:1097,57,0	1/1:0,25:25:75.26:1449,75,0	1/1:0,20:21:60.68:1156,61,0	1/1:1,23:24:69.19:1295,69,0	1/1:0,39:38:99:2145,111,0	0/0:21,0:21:63.20:0,63,942	0/0:34,0:34:99:0,99,1516	1/1:1,28:30:84.29:1588,84,0	1/1:3,20:24:72.25:1357,72,0	1/1:1,18:20:60.21:1148,60,0	1/1:4,18:22:51.17:985,51,0	1/1:2,30:35:78.27:1490,78,0	1/1:1,35:36:99:1907,99,0	1/1:1,26:27:69.24:1333,69,0	1/1:0,24:24:69.24:1332,69,0	0/0:21,0:21:60.20:0,60,919	1/1:3,32:36:99:1874,99,0	0/0:12,0:12:30.10:0,30,460
chr10	36996296	.	A	AGATG	9289.95	PASS	AB=0.604;AC=28;AF=0.519;AN=54;BaseQRankSum=-11.554;DP=977;FS=6.283;HRun=0;HaplotypeScore=147.1816;InbreedingCoeff=0.6990;MQ=59.73;MQ0=9;MQRankSum=1.496;QD=17.40;ReadPosRankSum=-2.386;VQSLOD=3.3124;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:65.41:0,65,870	1/1:5,11:17:18.06:395,18,0	0/0:41,0:23:1.82:0,2,5	./.	0/1:10,21:35:2.05:781,0,2	0/0:23,0:23:32.28:0,32,492	0/0:34,0:34:57.07:0,57,755	1/1:32,0:30:11.93:104,12,0	1/1:15,29:44:33.11:770,33,0	0/0:59,0:59:93.74:0,94,1358	0/0:19,0:19:39.04:0,39,495	0/0:41,0:41:72.24:0,72,1119	0/1:13,15:33:13.84:201,0,14	0/1:8,22:31:23.05:474,0,23	0/0:49,0:49:99:0,99,1437	1/1:9,19:29:18.06:427,18,0	0/1:14,16:33:4.88:464,0,5	0/0:35,0:35:72.13:0,72,998	1/1:22,8:31:30.05:507,30,0	1/1:12,15:27:33.02:661,33,0	1/1:34,40:76:57.19:1352,57,0	1/1:11,18:29:27.09:626,27,0	0/0:26,0:24:48.12:0,48,684	0/0:34,0:34:59.85:0,60,918	1/1:10,18:27:27.06:518,27,0	1/1:23,15:41:54.02:965,54,0	1/1:11,11:22:4.11:546,4,0	1/1:11,12:23:21.07:498,21,0
chr10	36998329	.	CTT	C	2594.56	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=10.179;DP=765;FS=3.677;HRun=4;HaplotypeScore=89.8931;InbreedingCoeff=1.0000;MQ=85.04;MQ0=1;MQRankSum=-1.635;QD=33.70;ReadPosRankSum=2.439;VQSLOD=3.1760;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,151,2798	0/0:18,0:18:54.19:0,54,1012	0/0:31,0:31:86.62:0,87,1470	0/0:24,0:24:68.41:0,68,1162	0/0:21,0:21:63.19:0,63,1111	0/0:32,0:31:93.32:0,93,1736	0/0:34,0:34:99:0,102,1901	0/0:31,0:31:87.29:0,87,1592	0/0:26,0:26:75.25:0,75,1376	0/0:33,0:32:93.32:0,93,1725	0/0:22,0:22:63.22:0,63,1180	1/1:0,23:23:57.19:839,57,0	0/0:26,0:26:75.26:0,75,1398	0/0:33,0:33:96.32:0,96,1764	0/0:22,0:22:66.22:0,66,1208	0/0:32,0:32:87.28:0,87,1593	0/0:24,0:24:72.22:0,72,1301	0/0:21,0:21:63.17:0,63,1114	0/0:23,0:23:69.23:0,69,1255	0/0:31,0:31:93.31:0,93,1701	0/0:28,0:27:75.25:0,75,1369	0/0:23,0:23:66.23:0,66,1222	1/1:0,22:22:44.81:662,45,0	1/1:1,31:31:84.28:1236,84,0	0/0:27,0:27:69.22:0,69,1228	0/0:29,0:29:81.27:0,81,1480	0/0:29,0:29:87.29:0,87,1565	0/0:17,0:17:51.17:0,51,955
chr10	36999451	.	T	TGTGA	2508.81	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=3.630;DP=1031;FS=8.311;HRun=0;HaplotypeScore=237.4052;InbreedingCoeff=0.8177;MQ=57.77;MQ0=25;MQRankSum=-6.219;QD=20.56;ReadPosRankSum=1.042;VQSLOD=2.2439;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,135,2251	0/0:9,0:9:27.08:0,27,480	0/0:45,0:15:14.61:0,15,171	0/0:38,0:17:18.83:0,19,251	0/0:29,0:29:84.27:0,84,1535	0/0:36,0:35:99:0,99,1695	0/0:41,0:40:99:0,117,2089	0/0:26,0:26:69.20:0,69,1178	0/0:51,0:51:99:0,153,2673	0/0:37,0:36:99:0,105,1960	0/0:21,0:21:50.49:0,50,821	1/1:4,28:34:56.98:1489,57,0	0/0:44,0:44:99:0,132,2325	0/0:47,0:47:99:0,124,2265	0/0:47,1:47:99:0,135,2446	0/0:41,0:41:99:0,120,2197	0/0:32,0:32:90.25:0,90,1625	0/0:45,0:45:79:0,79,2157	0/0:25,0:21:54.07:0,54,948	0/0:24,0:24:72.21:0,72,1279	0/0:104,0:99:99:0,268,4741	0/0:38,0:38:99:0,111,1932	1/1:0,13:14:11.82:322,12,0	1/1:5,48:51:24.02:752,24,0	0/0:25,0:25:72.16:0,72,1162	0/0:36,0:36:96.31:0,96,1761	0/0:21,0:21:60.18:0,60,1073	0/1:14,0:14:91.06:91,0,560
chr10	36999454	.	G	GAGTA	1745.29	PASS	AB=0.947;AC=6;AF=0.107;AN=56;BaseQRankSum=5.782;DP=1029;FS=6.346;HRun=0;HaplotypeScore=237.3301;InbreedingCoeff=0.6113;MQ=57.67;MQ0=25;MQRankSum=-5.841;QD=15.58;ReadPosRankSum=0.389;VQSLOD=2.6996;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,141,2726	0/0:9,0:9:27.09:0,27,549	0/0:44,0:13:19.70:0,20,207	0/0:38,0:17:24.36:0,24,356	0/0:29,0:29:84.27:0,84,1712	0/0:38,0:37:99:0,111,2070	0/0:44,0:43:99:0,117,2375	0/0:27,0:27:75.20:0,75,1397	0/0:52,0:52:99:0,154,3103	0/0:36,0:35:99:0,105,2194	0/0:21,0:21:48.15:0,48,940	1/1:34,0:31:35.16:1134,35,0	0/0:45,0:45:99:0,132,2627	0/0:45,0:45:99:0,127,2571	0/0:48,0:47:99:0,141,2797	0/0:41,0:41:99:0,123,2511	0/0:30,0:30:90.31:0,90,1840	0/0:44,1:45:65.10:0,65,2500	0/0:26,0:22:57.15:0,57,1118	0/0:25,0:25:72.22:0,72,1439	0/0:105,1:101:99:0,286,5535	0/0:38,0:38:99:0,111,2256	1/1:10,0:10:12.43:238,12,0	0/1:51,0:45:39.46:385,0,39	0/0:26,0:26:78.23:0,78,1436	0/0:34,0:34:99:0,102,2032	0/0:21,0:21:63.20:0,63,1254	0/1:15,2:17:99:122,0,733
chr10	36999754	.	G	GTGAT	8697.86	PASS	AB=0.758;AC=14;AF=0.250;AN=56;BaseQRankSum=11.916;DP=1127;FS=5.495;HRun=0;HaplotypeScore=205.6266;InbreedingCoeff=0.7817;MQ=56.39;MQ0=21;MQRankSum=-7.786;QD=28.33;ReadPosRankSum=-3.557;VQSLOD=3.8499;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:2,46:48:36.07:694,36,0	0/0:11,0:11:27.09:0,27,523	0/0:31,0:2:2.98:0,3,23	0/1:34,0:2:14.29:14,0,22	0/0:19,0:19:54.18:0,54,990	1/1:4,13:17:27.09:694,27,0	1/1:6,52:59:35.89:1285,36,0	0/0:28,0:28:81.28:0,81,1513	0/0:68,0:68:99:0,199,3645	1/1:5,41:47:99:2922,117,0	1/1:0,10:12:14.97:298,15,0	0/0:72,0:72:99:0,204,3513	0/0:56,0:56:99:0,160,2927	0/0:64,0:63:99:0,186,3415	1/1:5,48:56:52.17:1888,52,0	0/0:53,0:53:99:0,160,3057	0/0:25,0:25:75.26:0,75,1440	0/1:2,29:32:19.02:903,0,19	0/0:13,0:12:36.12:0,36,670	0/0:25,0:25:75.26:0,75,1387	0/0:169,0:168:99:0,464,8663	0/0:26,0:26:75.25:0,75,1363	0/0:26,0:25:57.11:0,57,1020	0/0:55,0:55:99:0,156,2748	0/0:19,0:19:51.17:0,51,963	0/0:42,0:42:99:0,123,2267	0/0:10,0:10:27.09:0,27,506	0/0:8,0:8:21.07:0,21,385
chr10	36999936	.	TG	T	3223.52	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=11.441;DP=1072;FS=0.364;HRun=7;HaplotypeScore=127.3186;InbreedingCoeff=0.9997;MQ=65.26;MQ0=3;MQRankSum=1.169;QD=24.80;ReadPosRankSum=2.951;VQSLOD=2.3614;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,123,1503	0/0:15,0:14:32.89:0,33,391	0/0:41,0:32:60.96:0,61,744	0/0:45,0:31:72.76:0,73,932	0/0:38,0:38:99:0,108,1346	0/0:13,0:13:36.12:0,36,453	0/0:39,0:39:99:0,102,1255	0/0:34,0:34:75.24:0,75,942	0/0:54,0:54:99:0,150,1867	0/0:54,0:53:99:0,144,1798	0/0:25,0:25:60.18:0,60,743	1/1:2,50:53:99:1469,144,0	0/0:49,0:49:99:0,138,1723	0/0:47,0:47:99:0,132,1646	0/0:40,0:40:93.24:0,93,1139	0/0:38,0:38:96.29:0,96,1181	0/0:37,1:38:96.27:0,96,1177	0/0:22,0:22:60.18:0,60,739	0/0:22,0:22:54.17:0,54,678	0/0:26,0:26:36.05:0,36,762	0/0:117,0:116:99:0,293,3579	0/0:36,0:37:98.94:0,99,1221	1/1:3,25:28:69.15:704,69,0	1/1:5,44:49:99:1194,117,0	0/0:32,0:32:90.26:0,90,1099	0/0:32,0:32:93.29:0,93,1158	0/0:13,0:13:33.11:0,33,415	0/0:20,0:20:54.17:0,54,678
chr10	37000006	.	C	CGT	2511.39	PASS	AB=0.662;AC=4;AF=0.071;AN=56;BaseQRankSum=4.828;DP=933;FS=17.174;HRun=0;HaplotypeScore=192.7962;InbreedingCoeff=0.4822;MQ=55.13;MQ0=15;MQRankSum=3.540;QD=22.83;ReadPosRankSum=5.021;VQSLOD=2.9412;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:58.24:0,58,623	0/0:14,0:13:20.98:0,21,230	0/0:37,0:18:49.32:0,49,656	0/0:45,0:17:42.98:0,43,584	0/0:30,0:30:87.28:0,87,1343	0/0:17,0:17:21.89:0,22,138	0/0:35,0:35:40.93:0,41,409	0/0:43,0:43:92.96:0,93,1154	0/0:46,0:46:99:0,128,2011	0/0:41,0:41:70.34:0,70,806	0/0:14,0:14:22.92:0,23,289	0/1:21,19:40:6.42:864,0,6	0/0:45,0:44:41.17:0,41,806	0/0:44,0:44:33.76:0,34,731	0/0:38,0:38:66.35:0,66,624	0/0:31,0:31:91.54:0,92,1440	0/0:26,0:26:75.26:0,75,1186	0/0:22,0:22:51.57:0,52,436	0/0:18,0:17:39.60:0,40,430	0/0:27,0:27:15.03:0,15,330	0/0:80,0:79:99:0,102,1753	0/0:32,0:32:34.32:0,34,505	1/1:12,16:28:35.11:711,35,0	0/1:19,23:42:94.72:1051,0,95	0/0:28,0:28:50.59:0,51,616	0/0:35,0:35:99:0,101,1496	0/0:13,0:13:3.95:0,4,193	0/0:15,0:15:41.37:0,41,597
chr10	37000007	.	A	ATGTGTG	7964.66	PASS	AB=0.883;AC=23;AF=0.411;AN=56;BaseQRankSum=1.326;DP=972;FS=4.026;HRun=0;HaplotypeScore=254.8828;InbreedingCoeff=0.4527;MQ=55.14;MQ0=15;MQRankSum=-5.126;QD=13.80;ReadPosRankSum=-1.896;VQSLOD=3.8278;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:36,11:50:57.66:1326,58,0	0/0:5,0:13:8.05:0,8,72	0/1:35,0:17:50.14:50,0,236	0/1:46,0:18:25.30:25,0,74	0/0:29,0:30:53.99:0,54,991	1/1:5,12:19:23.84:715,24,0	1/1:23,4:37:21.54:391,22,0	0/1:23,0:45:52.43:124,0,52	0/0:43,0:46:73.77:0,74,1872	1/1:19,20:45:58.71:1736,59,0	1/1:8,7:17:12.04:336,12,0	0/1:41,0:41:61.15:189,0,61	0/0:19,0:46:31.94:0,32,333	0/0:17,0:46:31.58:0,32,287	1/1:14,24:43:57.19:1734,57,0	0/0:29,0:31:85.17:0,85,1717	0/0:23,0:26:60.18:0,60,1149	1/1:13,4:22:39.13:845,39,0	0/1:15,0:21:29.24:78,0,29	0/0:8,0:28:21.08:0,21,141	0/1:54,0:81:79.74:80,0,258	0/0:11,0:32:18.26:0,18,95	1/1:28,0:28:41.09:184,41,0	0/1:43,0:43:99:153,0,351	0/0:17,0:30:16.82:0,17,204	0/0:32,0:35:76.13:0,76,1487	0/0:7,0:15:5.99:0,6,108	0/0:14,0:15:30.10:0,30,590
chr10	37000552	.	A	AT	2020.01	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=4.409;DP=696;FS=1.091;HRun=4;HaplotypeScore=108.9473;InbreedingCoeff=0.9999;MQ=78.48;MQ0=0;MQRankSum=-8.418;QD=28.06;ReadPosRankSum=0.169;VQSLOD=2.5099;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,126,1428	0/0:11,0:11:33.06:0,33,354	0/0:23,0:23:37.13:0,37,485	0/0:24,0:25:57.65:0,58,582	0/0:22,0:22:60.17:0,60,681	0/0:20,0:20:57.16:0,57,644	0/0:20,0:20:54.15:0,54,612	0/0:22,0:21:57.15:0,57,639	0/0:31,0:31:78.20:0,78,874	0/0:25,0:25:69.20:0,69,782	0/0:19,0:19:51.14:0,51,578	1/1:5,20:25:60.20:819,60,0	0/0:30,0:30:66.19:0,66,748	0/0:24,0:24:72.21:0,72,816	0/0:26,0:26:75.21:0,75,850	0/0:32,0:32:81.23:0,81,919	0/0:32,0:32:87.25:0,87,986	0/0:17,0:17:51.15:0,51,578	0/0:20,0:20:51.13:0,51,571	0/0:23,0:23:69.20:0,69,783	0/0:29,0:29:84.22:0,84,942	0/0:17,0:17:45.13:0,45,510	1/1:3,20:23:48.16:656,48,0	1/1:3,21:24:54.56:688,55,0	0/0:30,0:30:90.24:0,90,1010	0/0:25,0:25:75.21:0,75,850	0/0:33,0:33:90.22:0,90,999	0/0:22,0:22:60.17:0,60,680
chr10	37000566	.	AT	A	6069.37	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=9.692;DP=645;FS=3.585;HRun=10;HaplotypeScore=94.7084;InbreedingCoeff=0.9741;MQ=72.83;MQ0=0;MQRankSum=-3.161;QD=20.71;ReadPosRankSum=0.970;VQSLOD=5.3997;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,123,1326	1/1:2,8:10:23.98:208,24,0	0/0:20,0:19:20.08:0,20,341	0/0:21,0:21:40.36:0,40,384	0/0:21,0:22:60.03:0,60,641	0/0:17,0:17:48.13:0,48,531	0/0:20,0:20:54.12:0,54,580	1/1:2,17:19:50.92:431,51,0	0/0:18,0:18:51.14:0,51,563	0/0:26,0:26:69.18:0,69,757	0/0:17,0:18:41.89:0,42,424	1/1:1,17:18:50.99:442,51,0	1/1:2,26:28:65.98:573,66,0	1/1:1,26:27:74.97:651,75,0	0/0:26,0:26:57.15:0,57,631	0/0:27,0:27:78.20:0,78,849	0/0:31,0:31:87.24:0,87,962	0/0:18,0:18:48.13:0,48,531	1/1:5,14:19:41.92:350,42,0	1/1:3,21:24:32.72:505,33,0	1/1:8,23:31:45.45:549,45,0	1/1:2,18:20:29.61:418,30,0	1/1:4,12:16:2.80:252,3,0	1/1:4,22:26:59.91:518,60,0	1/1:3,22:25:62.97:547,63,0	0/0:24,0:24:51.14:0,51,564	1/1:5,25:30:71.98:625,72,0	0/0:22,0:22:63.17:0,63,697
chr10	37002216	.	T	TG	4744.07	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-10.266;DP=507;FS=0.383;HRun=5;HaplotypeScore=49.4700;InbreedingCoeff=0.9893;MQ=81.11;MQ0=0;MQRankSum=0.149;QD=34.13;ReadPosRankSum=0.559;VQSLOD=4.9435;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,25:26:63.20:820,63,0	0/0:10,0:10:27.07:0,27,290	0/0:18,0:18:38.93:0,39,384	0/0:10,0:10:13.15:0,13,140	0/0:17,0:17:45.10:0,45,475	1/1:1,15:16:45.15:592,45,0	1/1:2,21:23:60.20:790,60,0	0/0:23,0:23:54.12:0,54,568	0/0:21,0:21:57.11:0,57,596	1/1:0,16:16:48.16:629,48,0	1/1:2,7:9:18.06:235,18,0	0/0:21,0:21:63.16:0,63,677	0/0:20,0:20:60.15:0,60,645	0/0:14,0:14:39.10:0,39,419	1/1:1,14:15:39.13:513,39,0	0/0:15,0:15:45.10:0,45,476	0/0:36,0:36:99:0,99,1064	1/1:2,32:34:90.27:1165,90,0	0/0:22,0:22:60.15:0,60,645	0/0:6,0:6:15.04:0,15,161	0/0:36,0:36:99:0,105,1126	0/0:13,0:13:33.08:0,33,354	0/0:12,0:12:33.08:0,33,354	0/0:15,0:15:42.10:0,42,451	0/0:6,0:6:18.05:0,18,193	0/0:24,0:24:69.16:0,69,734	0/0:20,0:20:60.14:0,60,636	0/0:9,0:9:27.07:0,27,289
chr10	37004300	.	CTAAG	C	10443.28	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=10.482;DP=595;FS=12.586;HRun=0;HaplotypeScore=112.9991;InbreedingCoeff=0.9986;MQ=76.84;MQ0=0;MQRankSum=-6.750;QD=48.13;ReadPosRankSum=1.088;VQSLOD=5.1797;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,114,3187	1/1:0,6:6:18.06:359,18,0	0/0:18,0:18:49.98:0,50,1305	0/0:22,0:22:63.22:0,63,1699	0/0:14,0:14:42.14:0,42,1138	0/0:16,0:16:45.15:0,45,1249	0/0:21,0:21:57.20:0,57,1589	1/1:3,32:35:93.31:1808,93,0	0/0:19,0:19:57.20:0,57,1535	0/0:27,0:27:78.27:0,78,2167	0/0:13,0:13:36.12:0,36,1006	0/0:25,0:25:75.26:0,75,2065	1/1:0,28:28:72.25:1410,72,0	1/1:0,19:19:54.19:1077,54,0	0/0:15,0:15:45.15:0,45,1259	0/0:25,0:25:75.26:0,75,2083	0/0:22,0:22:66.20:0,66,1781	0/0:23,0:23:69.24:0,69,1913	1/1:1,19:20:57.18:1084,57,0	1/1:0,13:13:33.11:658,33,0	1/1:1,37:38:69.16:1354,69,0	1/1:1,27:28:62.93:1257,63,0	0/0:21,0:21:60.21:0,60,1670	0/0:31,0:31:93.32:0,93,2561	1/1:1,15:16:36.12:718,36,0	0/0:17,0:17:48.16:0,48,1338	1/1:0,14:14:36.12:718,36,0	0/0:10,0:10:30.10:0,30,818
chr10	37004772	.	TA	T	4159.12	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=13.467;DP=614;FS=0.724;HRun=8;HaplotypeScore=58.0899;InbreedingCoeff=0.9642;MQ=79.81;MQ0=0;MQRankSum=-3.032;QD=23.63;ReadPosRankSum=2.635;VQSLOD=4.2758;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,32:34:75.11:724,75,0	0/0:8,0:8:24.07:0,24,290	0/0:20,0:20:42.25:0,42,421	0/0:9,0:9:2.25:0,2,25	0/0:29,1:30:55.31:0,55,905	1/1:3,20:23:54.08:521,54,0	1/1:2,14:16:33.05:319,33,0	0/0:31,0:31:84.24:0,84,995	0/0:15,0:15:45.14:0,45,544	1/1:3,27:30:81.10:771,81,0	1/1:1,24:25:66.10:637,66,0	0/0:23,0:23:69.18:0,69,803	0/0:22,0:22:57.16:0,57,670	0/0:24,0:24:69.16:0,69,790	1/1:1,16:17:39.06:377,39,0	0/0:20,0:20:45.13:0,45,532	0/0:31,0:30:75.24:0,75,970	1/1:1,30:31:84.13:811,84,0	0/0:27,0:27:72.19:0,72,839	0/0:14,0:14:42.12:0,42,498	0/0:18,0:18:48.15:0,48,580	0/0:23,0:23:69.21:0,69,833	0/0:20,0:20:48.15:0,48,580	0/0:10,0:10:24.07:0,24,289	0/0:21,0:21:63.18:0,63,749	0/0:21,1:22:28.19:0,28,614	0/0:32,0:31:90.27:0,90,1078	0/0:18,0:18:54.17:0,54,652
chr10	37004990	.	TCAAA	T	2876.12	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=10.292;DP=666;FS=1.097;HRun=0;HaplotypeScore=105.6653;InbreedingCoeff=0.9144;MQ=89.34;MQ0=0;MQRankSum=-2.932;QD=46.39;ReadPosRankSum=3.298;VQSLOD=4.4597;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,135,3509	0/0:8,0:8:24.08:0,24,648	0/0:28,0:28:81.26:0,81,2052	0/0:21,0:21:57.07:0,57,1330	0/0:32,0:32:90.31:0,90,2429	0/0:16,0:16:45.14:0,45,1120	0/0:16,0:16:45.15:0,45,1053	0/0:31,0:31:90.30:0,90,2366	0/0:21,0:21:63.22:0,63,1700	0/0:29,0:29:84.29:0,84,2268	0/0:23,0:23:66.23:0,66,1746	1/1:0,26:26:72.25:1367,72,0	0/0:21,0:21:60.21:0,60,1543	0/0:18,1:19:0.30:0,0,1400	0/0:28,0:28:81.28:0,81,2187	0/0:18,0:18:54.19:0,54,1458	0/0:16,0:16:48.16:0,48,1222	0/0:15,0:15:43.39:0,43,1134	0/0:41,0:41:99:0,120,3001	0/0:29,0:29:84.29:0,84,2234	0/0:35,0:35:99:0,99,2669	0/0:28,0:28:78.27:0,78,2055	1/1:3,13:16:42.14:797,42,0	1/1:1,19:20:45.03:854,45,0	0/0:20,0:20:60.21:0,60,1620	0/0:28,0:28:75.26:0,75,1985	0/0:27,0:27:75.26:0,75,2008	0/0:8,0:8:24.08:0,24,647
chr10	37005844	.	T	TA	2385.76	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-9.304;DP=716;FS=7.034;HRun=6;HaplotypeScore=70.3860;InbreedingCoeff=0.9992;MQ=60.21;MQ0=3;MQRankSum=1.694;QD=30.59;ReadPosRankSum=2.603;VQSLOD=4.3824;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,111,1132	0/0:11,0:11:24.05:0,24,245	0/0:22,0:19:53.48:0,53,523	0/0:27,0:20:54.08:0,54,540	0/0:24,0:24:66.14:0,66,667	0/0:27,0:27:66.15:0,66,673	0/0:25,0:25:66.14:0,66,672	0/0:37,0:36:96.20:0,96,974	0/0:32,0:32:87.20:0,87,887	0/0:31,0:31:84.18:0,84,853	0/0:21,0:21:51.09:0,51,512	1/1:1,20:21:54.17:679,54,0	0/0:20,0:20:54.06:0,54,533	0/0:19,0:19:51.11:0,51,520	0/0:30,0:30:87.18:0,87,881	0/0:19,0:19:48.11:0,48,490	0/0:28,0:28:69.15:0,69,704	0/0:31,0:31:84.16:0,84,847	0/0:15,0:15:39.08:0,39,392	0/0:26,0:26:63.14:0,63,642	0/0:36,0:36:99:0,105,1064	0/0:22,0:22:66.14:0,66,667	1/1:3,18:21:54.17:679,54,0	1/1:0,36:36:93.30:1170,93,0	0/0:23,0:23:69.16:0,69,704	0/0:25,0:25:66.14:0,66,673	0/0:28,0:28:72.16:0,72,735	0/0:14,0:14:39.06:0,39,389
chr10	37006608	.	C	CT	3701.43	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-10.617;DP=651;FS=0.000;HRun=10;HaplotypeScore=72.8036;InbreedingCoeff=0.9707;MQ=72.05;MQ0=8;MQRankSum=-0.386;QD=21.52;ReadPosRankSum=1.665;VQSLOD=4.5019;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,44:50:85.79:1144,86,0	0/0:7,0:7:17.98:0,18,148	0/0:30,0:16:24.78:0,25,204	0/0:26,0:18:4.60:0,5,88	0/0:21,0:21:19.17:0,19,362	1/1:5,10:15:29.78:289,30,0	1/1:2,9:11:24.06:256,24,0	0/0:31,0:32:61.90:0,62,491	0/0:20,0:20:38.95:0,39,320	1/1:5,17:23:29.32:494,29,0	1/1:3,19:23:29.28:487,29,0	0/0:16,0:16:29.16:0,29,228	0/0:19,0:19:41.93:0,42,345	0/0:15,0:15:32.47:0,32,270	1/1:5,18:23:26.48:487,26,0	0/0:15,0:15:31.99:0,32,252	0/0:33,0:34:53.63:0,54,625	1/1:4,21:22:51.13:544,51,0	0/0:27,0:26:65.91:0,66,540	0/0:37,0:35:76.42:0,76,608	0/0:25,0:26:64.96:0,65,523	0/0:22,1:23:24.94:0,25,411	0/0:22,0:20:50.93:0,51,419	0/0:26,0:26:61.97:0,62,499	0/0:19,0:19:52.19:0,52,422	0/0:26,0:25:59.85:0,60,484	0/0:27,0:27:68.91:0,69,566	0/0:10,0:10:20.97:0,21,172
chr10	37007828	.	CA	C	7824.47	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=14.193;DP=703;FS=2.914;HRun=5;HaplotypeScore=67.8633;InbreedingCoeff=0.9953;MQ=82.13;MQ0=0;MQRankSum=-2.503;QD=30.21;ReadPosRankSum=-0.423;VQSLOD=5.1759;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,129,1712	1/1:1,5:6:15.04:170,15,0	0/0:19,0:19:54.17:0,54,703	0/0:20,0:20:42.12:0,42,534	0/0:20,0:20:57.18:0,57,764	0/0:17,0:17:45.11:0,45,555	0/0:27,0:27:81.25:0,81,1078	1/1:4,27:31:78.19:865,78,0	0/0:31,0:31:78.26:0,78,1066	0/0:22,0:22:60.19:0,60,807	0/0:23,0:23:66.19:0,66,859	0/0:45,0:45:99:0,132,1766	1/1:3,32:35:90.26:1020,90,0	1/1:1,38:39:99:1156,102,0	0/0:23,0:23:66.21:0,66,886	0/0:23,0:23:66.17:0,66,840	0/0:33,0:33:96.28:0,96,1291	0/0:25,0:25:72.24:0,72,984	1/1:2,20:22:60.15:669,60,0	1/1:1,16:17:48.14:544,48,0	1/1:2,42:44:99:1293,114,0	1/1:1,19:20:57.16:645,57,0	0/0:14,0:14:36.06:0,36,455	0/0:21,0:21:57.18:0,57,763	1/1:1,22:23:63.18:714,63,0	0/0:32,0:32:87.29:0,87,1190	1/1:0,22:22:66.19:748,66,0	0/0:5,0:5:15.05:0,15,205
chr10	37008467	.	C	CTCTGTCTG	6298.75	PASS	AB=0.719;AC=34;AF=0.654;AN=52;BaseQRankSum=1.485;DP=629;FS=4.020;HRun=0;HaplotypeScore=219.9153;InbreedingCoeff=0.8167;MQ=64.51;MQ0=1;MQRankSum=-4.180;QD=15.79;ReadPosRankSum=-2.472;VQSLOD=3.7604;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,6:26:12.03:177,12,0	1/1:11,9:20:9.03:367,9,0	0/0:22,0:16:18.06:0,18,391	0/0:19,0:15:9.37:0,9,161	0/0:21,0:21:36.11:0,36,808	1/1:18,4:22:24.07:580,24,0	1/1:11,0:11:3.48:51,3,0	1/1:29,0:29:24.50:359,25,0	0/0:28,0:28:66.21:0,66,1541	1/1:36,4:39:57.64:1587,58,0	0/1:15,5:20:0:0,0,0	1/1:22,0:22:25.40:218,25,0	1/1:8,7:15:9.84:277,10,0	1/1:10,9:19:9.03:365,9,0	1/1:13,6:19:6.02:221,6,0	0/0:31,0:31:54.16:0,54,1243	0/0:24,0:24:45.15:0,45,1136	1/1:13,5:18:18.05:517,18,0	1/1:19,1:21:30.02:587,30,0	1/1:13,6:19:9.03:213,9,0	./.	1/1:23,7:30:2.90:24,3,0	1/1:22,0:24:29.97:261,30,0	./.	0/1:10,13:23:0.20:0,0,0	0/0:31,0:31:60.20:0,60,1437	1/1:14,7:21:12.04:495,12,0	0/0:27,0:26:51.11:0,51,1073
chr10	37008495	.	G	GTC	1759.12	PASS	AB=0.988;AC=19;AF=0.339;AN=56;BaseQRankSum=7.333;DP=643;FS=10.534;HRun=0;HaplotypeScore=201.3664;InbreedingCoeff=-0.1534;MQ=50.40;MQ0=8;MQRankSum=-3.476;QD=4.70;ReadPosRankSum=-1.805;VQSLOD=1.9204;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:26:28.53:80,0,29	1/1:18,0:18:20.61:214,21,0	0/0:32,0:13:39.13:0,39,583	0/0:20,0:9:23.92:0,24,318	0/0:18,0:18:51.07:0,51,725	0/1:24,0:24:80.12:80,0,148	0/1:11,0:11:19.71:44,0,20	0/1:29,0:29:99:183,0,751	0/0:34,0:34:99:0,99,1485	0/1:36,0:35:99:442,0,486	0/0:18,0:19:2.86:0,3,45	0/1:18,2:20:11.59:190,0,12	0/1:23,0:23:63.08:63,0,320	0/1:19,0:19:0.66:1,0,210	0/1:19,1:20:14.46:14,0,125	0/0:31,0:31:72.03:0,72,1001	0/0:22,0:22:56.39:0,56,869	0/1:19,1:20:94.63:112,0,95	0/1:22,0:22:99:137,0,469	0/1:23,0:23:99:126,0,346	0/0:8,0:8:6.01:0,6,69	1/1:21,0:21:7.49:35,7,0	0/1:20,0:20:99:123,0,106	0/1:18,0:18:0:0,0,0	0/0:30,0:30:30.09:0,30,380	0/0:30,0:30:87.29:0,87,1300	0/1:24,0:24:77.40:77,0,323	0/0:25,0:24:72.18:0,72,1030
chr10	37008498	.	TATAG	T	1872.37	PASS	AB=0.886;AC=19;AF=0.365;AN=52;BaseQRankSum=1.890;DP=599;FS=4.822;HRun=0;HaplotypeScore=193.3427;InbreedingCoeff=0.7178;MQ=51.10;MQ0=8;MQRankSum=-0.898;QD=8.55;ReadPosRankSum=0.552;VQSLOD=2.6237;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:17,5:22:15.04:181,15,0	0/0:14,0:15:6.47:0,6,83	./.	0/1:19,0:9:0:0,0,0	0/0:16,0:16:21.07:0,21,491	1/1:14,9:23:36.08:492,36,0	1/1:5,5:10:2.41:45,2,0	0/0:27,0:27:15.01:0,15,176	0/0:33,0:33:48.16:0,48,1057	1/1:21,0:28:1.24:195,1,0	./.	1/1:17,2:19:12.01:164,12,0	0/0:23,0:24:33.11:0,33,575	0/0:18,0:18:15.03:0,15,350	1/1:13,3:16:20.99:294,21,0	0/1:20,9:29:99:240,0,385	0/0:25,0:25:42.04:0,42,784	1/1:15,3:18:12.02:162,12,0	0/0:16,0:19:12.04:0,12,210	0/0:20,0:24:26.01:0,26,438	0/0:8,0:8:6.02:0,6,112	0/0:15,0:17:5.21:0,5,31	1/1:12,4:17:18.06:277,18,0	0/1:15,2:17:0.01:0,0,0	0/0:30,0:31:31.92:0,32,547	0/0:29,0:29:36.12:0,36,810	0/0:22,0:23:37.19:0,37,569	0/0:22,0:21:42.14:0,42,982
chr10	37008505	.	A	AGATA	2786.93	PASS	AB=1.000;AC=17;AF=0.340;AN=50;BaseQRankSum=-3.949;DP=592;FS=8.265;HRun=0;HaplotypeScore=201.3566;InbreedingCoeff=0.7373;MQ=50.32;MQ0=10;MQRankSum=-1.082;QD=14.67;ReadPosRankSum=-2.677;VQSLOD=1.8182;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:15.04:0,15,182	1/1:16,0:16:2.99:24,3,0	./.	./.	0/0:17,0:17:21.07:0,21,320	0/0:29,0:28:33.51:0,34,379	0/0:9,0:9:2.34:0,2,27	1/1:28,0:28:7.99:50,8,0	0/0:32,0:32:42.14:0,42,636	0/0:27,0:25:30.05:0,30,315	./.	0/0:18,0:18:12.02:0,12,127	1/1:23,0:23:33.11:763,33,0	0/0:20,0:20:14.83:0,15,229	0/0:17,0:17:2.55:0,3,149	0/0:28,0:28:36.08:0,36,443	0/0:25,0:25:25.21:0,25,385	0/0:17,0:17:15.02:0,15,156	1/1:18,0:16:12.04:278,12,0	1/1:24,0:24:24.01:513,24,0	1/1:3,4:8:6.02:105,6,0	1/1:17,0:17:3.85:11,4,0	0/0:20,0:20:18.02:0,18,168	0/0:15,0:15:0:0,0,0	0/1:32,0:32:5.36:593,0,5	0/0:25,0:25:33.11:0,33,502	1/1:24,0:24:30.16:623,30,0	0/0:21,0:21:42.14:0,42,641
chr10	37008590	.	G	GGCATACACAAA	63092.43	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-1.586;DP=688;FS=6.750;HRun=0;HaplotypeScore=219.6426;InbreedingCoeff=0.9633;MQ=71.27;MQ0=0;MQRankSum=-19.423;QD=134.53;ReadPosRankSum=-1.643;VQSLOD=3.9105;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,14:26:63.17:3165,63,0	1/1:4,6:11:30.10:1540,30,0	0/0:30,0:30:78.27:0,78,2397	0/0:22,0:22:62.40:0,62,1834	0/0:30,0:30:84.26:0,84,2775	1/1:12,11:27:63.22:3283,63,0	1/1:12,8:23:57.20:3099,57,0	1/1:25,12:39:99:5253,111,0	0/0:37,0:37:99:0,108,3804	1/1:8,20:28:84.29:4348,84,0	1/1:7,13:22:63.17:3118,63,0	1/1:5,23:28:75.26:4249,75,0	1/1:9,12:22:63.21:2846,63,0	1/1:6,10:16:48.16:2545,48,0	1/1:9,15:25:63.22:3282,63,0	0/0:30,0:30:87:0,87,3071	0/0:23,0:23:66.23:0,66,2342	1/1:5,9:15:32.61:1583,33,0	1/1:12,8:20:57.19:2402,57,0	1/1:8,19:27:66.23:3715,66,0	1/1:5,5:10:24.04:1223,24,0	1/1:9,19:30:81.28:4151,81,0	1/1:7,15:24:59.99:3074,60,0	1/1:5,8:15:33.07:1594,33,0	1/1:14,19:34:87.30:4602,87,0	0/0:26,0:26:1.63:0,2,2474	1/1:10,13:26:72.25:4019,72,0	0/0:21,0:21:63.22:0,63,2096
chr10	37009336	.	TC	T	2200.20	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.537;DP=597;FS=1.074;HRun=1;HaplotypeScore=87.9319;InbreedingCoeff=0.9937;MQ=87.29;MQ0=0;MQRankSum=-1.876;QD=32.84;ReadPosRankSum=2.571;VQSLOD=3.5260;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,138,2177	0/0:12,0:12:36.12:0,36,569	0/0:16,0:16:48.16:0,48,767	0/0:24,0:24:66.40:0,66,981	0/0:13,0:13:33.10:0,33,505	0/0:14,0:14:42.14:0,42,669	0/0:29,0:29:87.27:0,87,1339	0/0:30,0:30:87.27:0,87,1320	0/0:13,0:13:39.13:0,39,618	0/0:20,0:20:60.17:0,60,904	0/0:5,0:5:15.05:0,15,238	1/1:1,24:25:72.24:1005,72,0	0/0:14,0:14:39.12:0,39,594	0/0:23,0:23:69.21:0,69,1038	0/0:17,0:17:51.14:0,51,764	0/0:12,0:12:36.12:0,36,573	0/0:32,0:32:96.31:0,96,1505	0/0:22,0:22:66.22:0,66,1039	0/0:23,0:23:66.22:0,66,1034	0/0:16,0:16:48.16:0,48,765	0/0:43,0:43:99:0,126,1996	0/0:20,0:20:57.15:0,57,840	1/1:0,13:13:27.09:373,27,0	1/1:0,29:29:69.23:964,69,0	0/0:22,0:22:60.19:0,60,934	0/0:24,0:24:72.25:0,72,1152	0/0:29,0:29:87.26:0,87,1321	0/0:11,0:11:33.11:0,33,528
chr10	37010183	.	ATCCCCAGGGCTCCACCG	A	1284.49	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.166;DP=695;FS=4.586;HRun=0;HaplotypeScore=310.8251;InbreedingCoeff=0.9956;MQ=78.28;MQ0=0;MQRankSum=-4.370;QD=85.63;ReadPosRankSum=2.819;VQSLOD=2.7842;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:35:99:0,105,7896	1/1:6,9:15:30.10:1379,30,0	0/0:22,0:22:57.19:0,57,2368	0/0:16,0:16:39.02:0,39,1891	0/0:17,0:17:42.13:0,42,2432	0/0:21,0:21:54.17:0,54,3947	0/0:34,0:34:84.27:0,84,6199	0/0:29,0:29:75.26:0,75,4469	0/0:21,0:21:60.21:0,60,4133	0/0:24,0:24:57.20:0,57,4539	0/0:10,0:10:27.07:0,27,1869	0/0:27,0:27:78.25:0,78,5663	0/0:22,0:22:60.18:0,60,4170	0/0:29,0:29:75.24:0,75,4855	0/0:23,0:23:69.24:0,69,5128	0/0:17,0:17:51.17:0,51,3095	0/0:53,0:53:99:0,144,9810	0/0:36,0:36:90.27:0,90,6077	0/0:31,0:31:75.26:0,75,4537	0/0:14,0:14:33.11:0,33,2333	0/0:50,0:50:99:0,129,8898	0/0:18,0:18:48.15:0,48,3386	0/0:10,0:10:30.10:0,30,2187	0/0:38,0:38:99:0,99,7476	0/0:23,0:22:57.20:0,57,4379	0/0:28,0:28:72.25:0,72,5000	0/0:22,0:22:63.22:0,63,5080	0/0:9,0:9:24.08:0,24,1954
chr10	37010689	.	C	CTTAACCGCT	16159.08	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=2.524;DP=432;FS=0.403;HRun=0;HaplotypeScore=131.6410;InbreedingCoeff=0.9644;MQ=54.76;MQ0=2;MQRankSum=-14.765;QD=99.75;ReadPosRankSum=0.230;VQSLOD=5.1919;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:96.32:0,96,3005	1/1:3,7:10:21.06:933,21,0	0/0:13,0:10:12.20:0,12,863	0/0:16,0:12:36.12:0,36,1013	0/0:15,0:15:42.14:0,42,1319	0/0:14,0:14:33.11:0,33,1015	0/0:27,0:27:72.25:0,72,2247	1/1:12,4:13:30.09:941,30,0	0/0:16,0:16:45.12:0,45,1340	0/0:9,0:9:27.09:0,27,818	0/0:10,0:10:21.07:0,21,631	1/1:4,15:19:51.18:2419,51,0	1/1:3,10:13:33.11:1473,33,0	1/1:2,5:6:15.05:754,15,0	0/0:15,0:15:39.13:0,39,1152	0/0:12,0:12:33.11:0,33,1066	0/0:35,0:35:99:0,99,3089	0/0:22,0:22:63.20:0,63,1882	1/1:3,2:5:8.99:323,9,0	1/1:4,15:19:51.18:2256,51,0	1/1:1,3:3:6.02:302,6,0	1/1:3,9:13:33.11:1542,33,0	1/1:4,3:6:12.04:504,12,0	1/1:0,11:8:18.06:868,18,0	1/1:7,15:21:51.18:2403,51,0	0/0:15,0:15:33.11:0,33,1010	1/1:9,5:14:33.11:1441,33,0	0/0:13,0:13:39.13:0,39,1270
chr10	37010704	.	G	GC	11281.22	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-2.885;DP=505;FS=12.940;HRun=4;HaplotypeScore=90.1233;InbreedingCoeff=0.9783;MQ=55.82;MQ0=1;MQRankSum=-6.731;QD=30.91;ReadPosRankSum=0.146;VQSLOD=3.8759;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,41:42:99:1517,111,0	1/1:2,10:12:30.10:409,30,0	0/0:11,0:9:24.05:0,24,253	0/0:15,0:12:24.34:0,24,299	0/0:21,0:21:60.17:0,60,681	1/1:0,18:18:48.16:657,48,0	1/1:1,29:30:78.26:1063,78,0	1/1:3,19:19:48.16:653,48,0	0/0:15,0:15:42.08:0,42,449	1/1:1,9:10:27.06:337,27,0	1/1:2,13:15:30.03:383,30,0	1/1:2,24:26:60.14:793,60,0	1/1:0,17:17:42.14:573,42,0	1/1:1,10:10:18.06:244,18,0	1/1:1,15:16:33.11:451,33,0	0/0:9,0:9:24.07:0,24,272	0/0:32,0:32:84.22:0,84,942	1/1:1,23:24:66.22:903,66,0	1/1:0,12:12:33.11:451,33,0	1/1:0,21:21:57.19:777,57,0	1/1:1,5:6:6.02:82,6,0	1/1:2,12:14:27.09:367,27,0	1/1:2,8:9:18.06:246,18,0	1/1:1,15:13:31.16:380,31,0	1/1:2,21:21:35.93:423,36,0	0/0:20,0:20:54.15:0,54,612	1/1:2,18:20:45.06:572,45,0	0/0:17,0:17:42.12:0,42,476
chr10	37011466	.	GT	G	11235.59	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=9.017;DP=649;FS=6.808;HRun=8;HaplotypeScore=68.6937;InbreedingCoeff=0.9986;MQ=80.03;MQ0=0;MQRankSum=-1.649;QD=23.60;ReadPosRankSum=1.196;VQSLOD=5.5799;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,38:44:99:985,102,0	1/1:1,11:12:21.03:203,21,0	0/0:21,0:21:35.59:0,36,388	0/0:12,0:12:23.93:0,24,241	0/0:14,0:14:30.09:0,30,360	1/1:2,18:20:48.08:464,48,0	1/1:2,24:26:60.09:579,60,0	1/1:3,28:31:84.08:795,84,0	0/0:25,0:25:69.20:0,69,824	1/1:3,17:20:51.08:492,51,0	1/1:3,14:17:35.95:334,36,0	1/1:1,22:23:60.09:579,60,0	1/1:1,25:26:72.11:695,72,0	1/1:0,18:18:51.08:493,51,0	1/1:4,35:39:90.14:869,90,0	0/0:31,0:31:84.25:0,84,1004	0/0:38,0:38:99:0,108,1263	1/1:2,20:22:54.09:521,54,0	1/1:3,14:17:38.27:354,38,0	1/1:4,17:21:48.03:454,48,0	1/1:5,29:34:81.13:782,81,0	1/1:0,18:18:51.08:492,51,0	1/1:4,10:14:27.01:261,27,0	1/1:3,34:37:96.15:927,96,0	1/1:0,17:17:48.08:464,48,0	0/0:22,0:22:60.18:0,60,721	1/1:2,18:20:51.08:492,51,0	0/0:10,0:10:30.09:0,30,362
chr10	37013297	.	TA	T	10241.17	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=16.412;DP=771;FS=5.597;HRun=1;HaplotypeScore=74.5898;InbreedingCoeff=0.9988;MQ=91.30;MQ0=0;MQRankSum=-7.805;QD=39.09;ReadPosRankSum=0.501;VQSLOD=5.4051;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:52:99:0,160,2514	1/1:0,17:17:42.14:587,42,0	0/0:31,0:31:93.30:0,93,1423	0/0:29,0:29:84.27:0,84,1291	0/0:23,0:23:69.23:0,69,1091	0/0:31,0:31:93.32:0,93,1475	0/0:36,0:36:99:0,108,1702	1/1:0,29:29:87.29:1215,87,0	0/0:29,0:29:87.25:0,87,1319	0/0:29,0:29:87.29:0,87,1369	0/0:16,0:16:45.13:0,45,669	0/0:30,0:30:90.28:0,90,1389	1/1:1,29:30:78.26:1088,78,0	1/1:0,25:25:72.24:1005,72,0	0/0:29,0:29:87.28:0,87,1365	0/0:33,0:32:99:0,99,1560	0/0:21,0:21:63.20:0,63,984	0/0:27,0:27:81.23:0,81,1266	1/1:0,22:22:66.22:919,66,0	1/1:0,19:19:54.11:728,54,0	1/1:0,52:52:99:2013,144,0	1/1:0,21:21:60.20:839,60,0	0/0:23,0:23:69.24:0,69,1103	0/0:37,0:37:99:0,108,1726	1/1:0,15:15:39.13:545,39,0	0/0:25,0:25:75.26:0,75,1199	1/1:0,32:32:93.31:1300,93,0	0/0:7,0:7:18.06:0,18,288
chr10	37015015	.	TCC	T	2200.40	PASS	AB=0.986;AC=38;AF=0.731;AN=52;BaseQRankSum=2.250;DP=374;FS=4.245;HRun=3;HaplotypeScore=65.5709;InbreedingCoeff=0.5692;MQ=53.10;MQ0=46;MQRankSum=0.776;QD=8.09;ReadPosRankSum=3.551;VQSLOD=0.6060;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:8,0:6:5.99:48,6,0	1/1:3,0:3:8.89:62,9,0	./.	0/1:16,0:9:1.12:1,0,28	0/0:15,0:14:12:0,12,104	1/1:18,0:14:19.77:158,20,0	1/1:8,0:7:8.98:74,9,0	1/1:2,9:10:27.21:201,27,0	0/0:19,0:18:7.29:0,7,197	1/1:13,0:12:32.19:275,32,0	1/1:12,0:10:8.99:75,9,0	0/1:13,0:12:0:0,0,0	1/1:13,0:12:23.73:166,24,0	1/1:20,0:19:31.42:243,31,0	1/1:9,0:8:11.99:101,12,0	0/0:22,0:21:6.90:0,7,266	0/1:14,0:12:17.36:17,0,73	1/1:11,0:8:15.32:103,15,0	1/1:15,0:8:23.91:191,24,0	1/1:11,0:9:14.99:127,15,0	1/1:24,0:21:8.99:75,9,0	1/1:14,0:11:17.93:144,18,0	./.	0/0:17,0:13:2.98:0,3,21	1/1:5,0:5:9:78,9,0	0/1:25,0:21:58.32:58,0,188	1/1:8,0:8:20.92:168,21,0	0/0:15,0:11:22.64:0,23,187
chr10	37015037	.	TCC	T	760.17	PASS	AB=1.000;AC=30;AF=0.714;AN=42;BaseQRankSum=-1.399;DP=375;FS=4.416;HRun=3;HaplotypeScore=92.9959;InbreedingCoeff=0.1336;MQ=32.60;MQ0=76;MQRankSum=0.306;QD=2.69;ReadPosRankSum=0.635;VQSLOD=-0.6430;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:10,0:6:2.82:17,3,0	1/1:9,0:9:0.47:1,0,0	./.	./.	1/1:9,0:7:2.97:20,3,0	1/1:27,0:22:8.71:68,9,0	1/1:22,0:17:3.40:25,3,0	0/1:9,0:6:1.59:90,0,2	0/0:28,0:27:4.91:0,5,119	1/1:3,8:11:16.97:106,17,0	./.	./.	1/1:24,0:20:15.59:77,16,0	1/1:20,0:17:5.67:26,6,0	0/1:21,0:19:0.06:0,0,0	0/1:19,0:16:20.43:20,0,55	0/1:20,0:15:17.32:17,0,25	1/1:16,0:12:26.69:181,27,0	1/1:10,0:6:13.39:76,13,0	0/1:11,0:7:0:0,0,0	./.	./.	./.	0/0:7,0:3:2.99:0,3,23	0/1:10,0:9:0:0,0,0	0/1:18,0:15:25.38:64,0,25	1/1:9,0:8:8.31:49,8,0	0/1:8,0:4:8.42:39,0,8
chr10	37015065	.	TCTCTCTCA	T	383.67	PASS	AB=0.958;AC=13;AF=0.260;AN=50;BaseQRankSum=1.137;DP=523;FS=2.602;HRun=0;HaplotypeScore=155.2626;InbreedingCoeff=0.1619;MQ=37.12;MQ0=58;MQRankSum=-1.200;QD=2.11;ReadPosRankSum=1.555;VQSLOD=2.7960;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:10:8.64:0,9,59	1/1:9,0:9:2.27:14,2,0	./.	./.	0/1:11,0:11:7.57:8,0,114	0/0:26,0:22:13.42:0,13,131	0/0:26,0:22:18.50:0,19,118	0/0:25,0:22:17.12:0,17,109	0/0:28,0:28:20.83:0,21,256	0/0:16,0:16:23.32:0,23,211	0/0:17,0:15:6.02:0,6,88	1/1:16,0:13:10.93:85,11,0	0/1:36,0:33:2.78:79,0,3	1/1:24,0:21:0.77:10,1,0	0/0:34,0:32:31.81:0,32,280	0/0:20,0:18:24.51:0,25,352	0/0:20,0:14:12.32:0,12,185	0/0:15,0:12:20.76:0,21,150	0/0:15,0:12:4:0,4,29	0/0:21,0:19:0.67:0,1,1	0/0:34,0:27:0.47:0,0,1	./.	0/1:19,0:16:14.56:15,0,21	0/1:23,0:19:38.73:39,0,40	0/0:17,0:16:0.94:0,1,1	0/1:11,8:17:24.95:199,0,25	0/1:17,0:17:23.04:27,0,23	0/1:8,0:5:31.15:47,0,31
chr10	37015071	.	TCACACACACA	T	1439.07	PASS	AB=0.848;AC=13;AF=0.271;AN=48;BaseQRankSum=1.261;DP=544;FS=1.865;HRun=0;HaplotypeScore=167.9301;InbreedingCoeff=0.5746;MQ=39.11;MQ0=50;MQRankSum=-4.877;QD=8.62;ReadPosRankSum=2.865;VQSLOD=2.8432;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:14:9.49:0,9,289	1/1:4,0:9:3.01:86,3,0	./.	./.	0/0:12,0:12:18.06:0,18,681	0/0:23,0:20:15.40:0,15,516	0/0:24,0:20:15.26:0,15,501	0/1:24,0:22:48.24:48,0,65	0/0:30,0:30:33.58:0,34,1205	0/0:18,0:18:27.09:0,27,1074	0/0:18,0:16:9.03:0,9,396	0/0:16,0:13:12.91:0,13,189	1/1:19,19:35:26.15:718,26,0	1/1:14,14:25:6.02:157,6,0	0/0:36,0:35:40.05:0,40,1584	0/0:21,0:19:27.09:0,27,1141	0/0:20,0:15:24.01:0,24,758	0/0:15,0:12:29.97:0,30,771	1/1:16,3:16:6.92:169,7,0	0/1:9,12:19:0.12:0,0,1	./.	./.	0/0:11,0:18:6.49:0,6,162	0/0:23,0:20:5.62:0,6,144	0/0:3,15:17:0.47:0,0,1	0/0:19,0:18:39.07:0,39,772	1/1:6,12:18:11.30:340,11,0	0/1:9,1:7:70.39:70,0,370
chr10	37015248	.	C	CTG	8258.74	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-12.719;DP=933;FS=0.658;HRun=0;HaplotypeScore=139.2920;InbreedingCoeff=0.9997;MQ=62.83;MQ0=5;MQRankSum=2.641;QD=35.91;ReadPosRankSum=1.072;VQSLOD=6.4727;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,42:43:99:1734,102,0	0/0:9,0:9:27.09:0,27,351	0/0:52,0:37:58.98:0,59,745	0/0:57,0:40:63.86:0,64,725	0/0:22,0:22:45.13:0,45,569	1/1:3,27:31:56.62:938,57,0	1/1:3,30:33:63.22:1072,63,0	0/0:43,0:43:92.73:0,93,1146	0/0:43,0:43:99:0,111,1442	1/1:9,26:35:87.17:1337,87,0	1/1:4,15:19:36.10:611,36,0	0/0:36,0:36:96.29:0,96,1219	0/0:43,0:43:93.27:0,93,1180	0/0:41,0:41:72.07:0,72,920	1/1:0,45:45:99:1733,102,0	0/0:31,0:31:75.20:0,75,931	0/0:27,0:26:47.71:0,48,818	1/1:4,19:23:50.88:834,51,0	0/0:18,0:18:36.06:0,36,437	0/0:30,0:30:84.23:0,84,1047	0/0:69,0:69:99:0,187,2374	0/0:24,0:24:63.20:0,63,818	0/0:28,0:28:75.06:0,75,959	0/0:34,0:34:84.23:0,84,1061	0/0:18,0:18:48.14:0,48,610	0/0:42,1:43:63.25:0,63,1335	0/0:21,0:21:51.16:0,51,663	0/0:14,0:14:36.10:0,36,450
chr10	37016924	.	G	GAA	4844.34	PASS	AB=0.565;AC=24;AF=0.429;AN=56;BaseQRankSum=-0.630;DP=619;FS=2.633;HRun=11;HaplotypeScore=79.7650;InbreedingCoeff=0.8290;MQ=58.68;MQ0=7;MQRankSum=-2.634;QD=18.78;ReadPosRankSum=-2.246;VQSLOD=3.7416;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:38:72.29:0,72,708	1/1:2,7:9:17.42:225,17,0	0/0:25,0:9:14.74:0,15,136	0/0:19,0:6:6.35:0,6,56	0/0:24,0:26:50.75:0,51,527	0/0:22,0:23:51.65:0,52,528	0/0:22,0:24:53.48:0,53,489	1/1:7,16:25:56.14:707,56,0	0/0:26,0:26:60.03:0,60,574	0/0:20,0:20:29.88:0,30,341	0/0:18,0:19:44.77:0,45,419	0/1:4,0:18:8.63:40,0,9	1/1:2,11:15:21.07:289,21,0	1/1:10,11:22:32.51:395,33,0	0/0:19,0:22:35.70:0,36,381	0/0:20,0:21:29.84:0,30,340	0/0:40,0:41:81.33:0,81,879	0/0:25,0:28:71.19:0,71,627	1/1:12,13:28:42.43:666,42,0	1/1:4,16:23:44.54:569,45,0	1/1:4,12:17:10.03:478,10,0	1/1:5,10:15:21.07:289,21,0	1/1:6,0:18:29.91:135,30,0	0/1:6,1:25:30.36:141,0,30	1/1:4,15:22:38.56:489,39,0	0/0:6,0:18:35.92:0,36,171	1/1:4,13:19:34.92:422,35,0	0/0:8,0:10:8.42:0,8,53
chr10	37017323	.	G	GGTTA	2188.70	PASS	AB=0.822;AC=10;AF=0.179;AN=56;BaseQRankSum=5.052;DP=713;FS=19.754;HRun=0;HaplotypeScore=189.1356;InbreedingCoeff=-0.2174;MQ=60.96;MQ0=2;MQRankSum=-10.526;QD=9.73;ReadPosRankSum=-5.647;VQSLOD=0.2562;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,108,2100	0/1:6,5:11:99:209,0,206	0/0:30,0:27:73.25:0,73,1230	0/0:30,0:28:74.76:0,75,1339	0/0:22,0:22:57.15:0,57,1072	0/0:26,0:26:75.24:0,75,1456	0/0:28,0:28:84.27:0,84,1598	0/1:24,0:24:99:353,0,626	0/0:26,0:26:72.23:0,72,1395	0/0:28,0:28:78.27:0,78,1481	0/0:25,0:25:75.24:0,75,1451	0/0:34,0:34:99:0,102,1917	0/1:16,9:25:99:127,0,581	0/1:20,1:21:99:116,0,275	0/0:37,0:37:99:0,108,2060	0/0:30,0:30:90.29:0,90,1749	0/0:19,0:19:57.18:0,57,1081	0/0:14,0:14:42.14:0,42,816	0/1:7,4:11:99:399,0,140	0/1:19,7:28:99:343,0,755	0/1:36,1:37:54.51:55,0,1229	0/1:9,7:16:99:197,0,432	0/0:22,0:22:65.95:0,66,1201	0/0:25,0:25:69.19:0,69,1241	0/1:23,3:26:99:157,0,315	0/0:32,0:32:93.32:0,93,1831	0/1:19,7:26:99:378,0,617	0/0:23,0:23:69.24:0,69,1374
chr10	37017353	.	T	TTAGATGGAGGGAGGGT	8541.83	PASS	AB=1.000;AC=26;AF=0.464;AN=56;BaseQRankSum=-2.482;DP=731;FS=16.941;HRun=0;HaplotypeScore=329.7925;InbreedingCoeff=0.4811;MQ=67.85;MQ0=1;MQRankSum=-6.687;QD=19.37;ReadPosRankSum=-4.809;VQSLOD=1.0285;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:30:58.35:58,0,1266	1/1:13,0:13:17.93:226,18,0	0/0:30,0:29:45.10:0,45,640	0/0:22,0:21:13.83:0,14,140	0/0:16,0:16:36.09:0,36,1296	0/1:27,0:27:29.79:30,0,1611	0/0:27,0:27:1.14:0,1,1230	1/1:28,0:28:60.01:841,60,0	0/0:27,0:27:66.15:0,66,2065	0/0:27,0:27:23.19:0,23,1113	0/1:27,0:27:82.81:83,0,1280	0/1:35,0:35:50.80:51,0,1629	1/1:23,0:23:36.04:1096,36,0	1/1:4,14:23:8.68:400,9,0	0/1:34,0:34:73.53:74,0,1750	0/0:26,0:26:60.15:0,60,1779	0/0:18,0:18:45:0,45,1303	0/0:15,0:15:6.09:0,6,882	1/1:19,0:18:33.01:729,33,0	1/1:29,0:29:53.82:1077,54,0	1/1:39,0:39:55.26:662,55,0	1/1:27,0:27:37.55:724,38,0	0/1:24,0:24:71.39:71,0,1052	0/0:24,0:24:1.15:0,1,1169	1/1:10,12:32:20.67:480,21,0	0/0:40,0:40:93.25:0,93,2986	1/1:31,0:31:60.08:1939,60,0	0/0:17,0:17:48.14:0,48,1807
chr10	37017999	.	A	AAG	13050.60	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-13.289;DP=632;FS=4.026;HRun=0;HaplotypeScore=93.3787;InbreedingCoeff=0.9977;MQ=88.73;MQ0=0;MQRankSum=-2.414;QD=48.70;ReadPosRankSum=0.538;VQSLOD=5.5853;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,123,1856	1/1:0,7:7:15.05:285,15,0	0/0:27,0:27:78.93:0,79,1026	0/0:20,0:20:50.62:0,51,720	0/0:22,0:22:66.17:0,66,964	0/0:18,0:18:54.16:0,54,785	0/0:25,0:25:69.22:0,69,1018	1/1:3,28:33:90.27:1589,90,0	0/0:22,0:22:66.22:0,66,1007	0/0:24,0:24:69.19:0,69,1030	0/0:17,0:17:51.17:0,51,779	1/1:1,24:25:66.14:1209,66,0	1/1:0,16:16:45.15:854,45,0	1/1:1,13:15:39.13:723,39,0	0/0:31,0:31:90.28:0,90,1315	0/0:14,0:14:42.13:0,42,624	0/0:40,0:38:99:0,117,1762	0/0:30,0:30:87.28:0,87,1310	1/1:2,14:16:45.15:813,45,0	1/1:1,23:24:66.22:1216,66,0	1/1:0,19:19:51.17:968,51,0	1/1:0,23:24:63.13:1134,63,0	1/1:4,22:28:75.25:1342,75,0	1/1:3,23:26:69.23:1269,69,0	1/1:2,18:20:48.16:911,48,0	0/0:24,0:24:72.23:0,72,1080	1/1:0,14:15:39.13:740,39,0	0/0:9,0:9:27.09:0,27,413
chr10	37018674	.	G	GACTA	26048.25	PASS	AB=0.936;AC=41;AF=0.732;AN=56;BaseQRankSum=-9.793;DP=669;FS=3.313;HRun=0;HaplotypeScore=102.2447;InbreedingCoeff=0.9057;MQ=80.16;MQ0=1;MQRankSum=-5.965;QD=51.18;ReadPosRankSum=2.130;VQSLOD=5.9811;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,26:36:63.22:1667,63,0	1/1:2,5:7:14.97:336,15,0	0/0:15,0:15:42.12:0,42,742	0/0:22,0:23:50.28:0,50,972	0/0:28,0:28:75.26:0,75,1386	1/1:1,21:22:51.18:1341,51,0	1/1:2,24:29:51.18:1348,51,0	1/1:4,20:25:69.17:1561,69,0	0/0:24,0:24:72.23:0,72,1312	1/1:2,15:17:42.14:1112,42,0	1/1:1,11:12:27.09:719,27,0	1/1:26,0:26:54.19:1133,54,0	1/1:2,27:29:75.19:1933,75,0	1/1:2,25:28:66.23:1758,66,0	1/1:4,19:25:54.19:1439,54,0	0/0:19,0:19:51.17:0,51,952	0/0:42,0:42:99:0,117,2077	1/1:1,11:12:27.09:720,27,0	1/1:2,15:18:54.17:1319,54,0	1/1:2,17:20:42.10:1058,42,0	1/1:4,43:47:99:2648,102,0	1/1:5,20:24:48.16:1255,48,0	1/1:23,0:23:50.92:1061,51,0	1/1:28,0:28:65.48:1379,65,0	1/1:2,17:20:45.15:1198,45,0	0/1:41,3:44:99:119,0,1855	1/1:2,14:16:36.12:941,36,0	0/0:9,0:9:27.09:0,27,504
chr10	37018678	.	A	AACTG	19979.42	PASS	AB=0.994;AC=35;AF=0.625;AN=56;BaseQRankSum=6.405;DP=638;FS=9.882;HRun=0;HaplotypeScore=116.2154;InbreedingCoeff=0.4593;MQ=81.59;MQ0=1;MQRankSum=-6.340;QD=41.71;ReadPosRankSum=6.553;VQSLOD=4.7902;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:35,0:35:27.73:1047,0,28	0/1:6,0:6:2.06:222,0,2	0/0:15,0:15:45.15:0,45,890	0/0:22,0:23:53.34:0,53,1134	0/0:27,0:27:75.26:0,75,1568	1/1:20,0:20:51.17:947,51,0	1/1:22,0:22:51.17:979,51,0	0/1:21,0:21:47.79:894,0,48	0/0:25,0:25:75.23:0,75,1517	1/1:17,0:17:18.16:756,18,0	1/1:11,0:11:27.09:520,27,0	1/1:0,23:23:54.19:1544,54,0	1/1:27,0:27:72.25:1407,72,0	1/1:27,0:27:45.24:1232,45,0	0/1:25,0:25:18.77:953,0,19	0/0:18,0:18:54.17:0,54,1093	0/0:42,0:42:99:0,123,2379	1/1:12,0:12:27.09:511,27,0	1/1:16,0:16:0.17:741,0,0	0/1:20,0:20:34.92:686,0,35	1/1:44,0:44:24.71:1821,25,0	0/1:22,0:22:7.79:838,0,8	1/1:0,24:25:53.84:1452,54,0	1/1:0,26:28:65.48:1909,65,0	1/1:19,0:19:8.18:801,8,0	0/1:44,0:44:37.55:38,0,2181	1/1:14,0:14:22.14:682,22,0	0/0:9,0:9:27.09:0,27,565
chr10	37019458	.	T	TGG	2377.01	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=5.207;DP=606;FS=8.100;HRun=0;HaplotypeScore=123.0842;InbreedingCoeff=0.8556;MQ=97.83;MQ0=1;MQRankSum=-2.377;QD=13.21;ReadPosRankSum=-1.027;VQSLOD=2.5425;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:75.15:0,75,787	1/1:2,4:7:4.71:93,5,0	0/0:29,0:29:77.98:0,78,1189	0/0:36,0:35:89.08:0,89,1315	0/0:26,0:26:78.25:0,78,1239	0/0:20,0:20:57.10:0,57,625	0/0:38,0:38:99:0,105,1093	1/1:3,1:15:15.47:156,15,0	0/0:29,0:29:87.28:0,87,1395	0/0:28,0:28:81.09:0,81,935	0/0:19,0:19:51:0,51,507	0/0:16,0:16:24.92:0,25,284	1/1:3,15:23:27.80:475,28,0	1/1:4,8:13:21.02:294,21,0	0/0:32,0:32:92.82:0,93,967	0/0:20,0:20:57.19:0,57,924	0/0:29,0:29:87.27:0,87,1392	0/0:20,0:20:60.15:0,60,683	1/1:4,2:7:10.83:137,11,0	1/1:3,2:9:4.79:64,5,0	1/1:7,2:18:10.80:124,11,0	1/1:4,14:21:24.98:477,25,0	0/0:8,0:8:15.95:0,16,118	0/1:28,0:28:99:179,0,146	1/1:8,10:19:28.40:452,28,0	0/0:32,0:32:93.31:0,93,1496	1/1:2,1:18:7.91:135,8,0	0/0:15,0:15:45.15:0,45,732
chr10	37019459	.	T	TGG	5333.62	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=14.086;DP=619;FS=0.731;HRun=7;HaplotypeScore=120.8992;InbreedingCoeff=0.9602;MQ=96.20;MQ0=1;MQRankSum=-5.994;QD=13.23;ReadPosRankSum=-1.261;VQSLOD=1.4234;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,0:30:52.40:185,52,0	1/1:7,0:7:5.44:98,5,0	0/0:28,0:28:56.41:0,56,686	0/0:35,0:35:55.54:0,56,771	0/0:25,0:25:66.19:0,66,768	1/1:3,0:20:36.97:129,37,0	1/1:4,0:38:78.79:276,79,0	1/1:17,0:17:33.03:368,33,0	0/0:29,0:29:87.25:0,87,1003	1/1:6,0:28:51.94:182,52,0	1/1:0,0:19:37.31:130,37,0	1/1:7,1:18:21.03:203,21,0	1/1:22,0:22:33.10:515,33,0	1/1:13,0:13:30.08:421,30,0	1/1:3,0:34:66.07:234,66,0	0/0:21,0:21:51.07:0,51,569	0/0:30,0:30:84.24:0,84,979	1/1:4,0:20:39.93:141,40,0	1/1:12,0:11:21.01:230,21,0	1/1:10,0:10:11.98:113,12,0	1/1:19,0:18:13.27:136,13,0	1/1:18,0:18:33.08:501,33,0	1/1:5,0:11:9.01:87,9,0	1/1:6,4:30:60.11:709,60,0	1/1:20,0:20:30.54:465,31,0	0/0:32,0:32:93.24:0,93,1063	1/1:17,0:17:23.82:212,24,0	0/0:15,0:15:42.12:0,42,489
chr10	37020235	.	CACACACACACATACT	C	2342.69	PASS	AB=0.749;AC=15;AF=0.268;AN=56;BaseQRankSum=0.962;DP=1314;FS=13.593;HRun=0;HaplotypeScore=466.4607;InbreedingCoeff=0.7416;MQ=57.30;MQ0=14;MQRankSum=-1.581;QD=6.10;ReadPosRankSum=-0.152;VQSLOD=0.3966;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:42:72.02:0,72,2984	0/1:4,8:12:0.05:0,0,0	0/0:63,0:30:12.46:0,12,138	0/0:57,0:26:16.12:0,16,287	0/0:30,0:30:58.42:0,58,2912	0/0:36,0:36:44.92:0,45,2062	0/0:37,0:36:60.19:0,60,2620	0/1:44,0:44:99:141,0,156	0/0:72,0:72:99:0,147,6916	0/0:51,0:50:98.03:0,98,5004	0/0:43,0:43:72.08:0,72,3374	0/0:51,0:50:49.03:0,49,1780	1/1:23,34:57:17.06:624,17,0	1/1:23,37:60:2.78:18,3,0	0/0:70,0:70:99:0,114,4604	0/0:52,0:52:96.28:0,96,5185	0/0:52,0:49:82.75:0,83,2877	0/0:34,0:34:69.21:0,69,3321	1/1:16,8:22:24.06:714,24,0	1/1:10,20:30:3.01:37,3,0	1/1:89,1:89:35.82:470,36,0	0/0:25,22:47:2.22:0,2,7	0/0:34,0:33:45.14:0,45,1712	0/0:49,0:47:75.20:0,75,2737	0/1:16,19:35:0:0,0,0	0/0:72,0:71:99:0,114,4812	1/1:8,24:32:13.96:507,14,0	0/0:36,0:36:63.15:0,63,2959
chr10	37020250	.	TAC	T	2555.89	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=13.201;DP=1246;FS=1.913;HRun=0;HaplotypeScore=203.0120;InbreedingCoeff=0.5881;MQ=54.74;MQ0=26;MQRankSum=0.532;QD=11.06;ReadPosRankSum=3.052;VQSLOD=3.7085;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,1:43:99:0,99,1679	0/0:10,0:10:3.48:0,3,51	0/0:45,0:12:26.57:0,27,395	0/0:48,0:23:42.35:0,42,661	0/0:39,0:38:90.76:0,91,1484	0/0:39,0:39:95.80:0,96,1561	0/0:38,1:38:90.13:0,90,1438	0/0:32,0:30:62.40:0,62,883	0/0:72,0:72:99:0,183,3041	0/0:61,0:61:99:0,161,2567	0/0:42,0:42:99:0,114,1844	1/1:9,42:50:62.05:767,62,0	0/1:52,0:52:7.71:8,0,364	0/0:53,0:55:23.43:0,23,402	0/0:64,0:64:99:0,145,2400	0/0:50,0:50:99:0,126,2107	0/0:50,0:48:99:0,110,1930	0/0:31,0:32:69.39:0,69,1335	0/1:22,0:21:12.14:12,0,238	0/0:27,0:27:14.93:0,15,193	0/0:79,0:96:98.87:0,99,1259	0/0:39,0:39:27.04:0,27,367	1/1:2,28:29:51.17:663,51,0	1/1:8,38:44:96.21:1246,96,0	0/0:27,0:28:15:0,15,229	0/0:68,0:67:99:0,163,2681	0/1:30,0:30:16.21:16,0,203	0/0:32,0:32:89.91:0,90,1364
chr10	37020267	.	C	CAT	364.49	PASS	AB=0.981;AC=5;AF=0.089;AN=56;BaseQRankSum=-0.622;DP=1217;FS=0.778;HRun=0;HaplotypeScore=224.6901;InbreedingCoeff=0.0762;MQ=52.79;MQ0=26;MQRankSum=0.295;QD=2.32;ReadPosRankSum=-3.146;VQSLOD=2.2822;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:47:99:0,120,1693	1/1:8,0:8:0.19:0,0,0	0/0:55,0:17:44.82:0,45,515	0/0:48,0:20:53.87:0,54,706	0/0:41,0:40:99:0,115,1646	0/0:30,0:30:81.24:0,81,1193	0/0:39,0:38:99:0,108,1574	0/1:32,0:29:77.63:78,0,869	0/0:72,0:72:99:0,198,2855	0/0:61,0:61:99:0,179,2627	0/0:39,0:39:99:0,111,1558	0/0:53,0:53:84.34:0,84,1160	0/0:43,0:43:23.57:0,24,379	0/0:50,0:50:6.04:0,6,301	0/0:66,0:66:99:0,168,2304	0/0:49,0:49:99:0,144,2113	0/0:49,0:46:99:0,124,1634	0/0:36,0:36:92.23:0,92,1307	0/1:16,0:14:99:131,0,274	0/0:26,0:26:17.94:0,18,217	0/1:95,6:100:99:256,0,1554	0/0:29,0:29:17.24:0,17,193	0/0:31,0:30:51.16:0,51,758	0/0:51,0:49:99:0,105,1512	0/0:27,0:27:14.74:0,15,183	0/0:59,0:58:99:0,159,2252	0/0:26,0:26:4.46:0,4,155	0/0:32,0:32:90.24:0,90,1320
chr10	37020297	.	TCA	T	9586.56	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=9.326;DP=1310;FS=9.069;HRun=0;HaplotypeScore=221.8706;InbreedingCoeff=0.9950;MQ=56.07;MQ0=3;MQRankSum=1.030;QD=29.14;ReadPosRankSum=3.872;VQSLOD=4.9471;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,41:47:99:1359,108,0	0/0:19,0:19:36.06:0,36,517	0/0:48,0:28:56.10:0,56,821	0/0:56,0:32:65.96:0,66,933	0/0:44,0:44:99:0,117,1936	1/1:5,26:31:82.84:1053,83,0	1/1:11,29:39:75.24:955,75,0	0/0:52,0:52:99:0,126,2055	0/0:60,0:60:99:0,154,2525	1/1:8,70:79:99:2578,212,0	1/1:5,25:30:72.23:916,72,0	0/0:60,1:61:85.20:0,85,1934	0/0:54,0:54:99:0,102,1647	0/0:61,0:61:86.85:0,87,1454	1/1:8,59:67:99:1641,129,0	0/0:63,0:63:99:0,175,2786	0/0:38,0:37:93.36:0,93,1693	1/1:6,27:34:51.73:1084,52,0	0/0:27,0:27:62.90:0,63,1004	0/0:34,0:34:48.16:0,48,803	0/0:110,0:111:99:0,196,3163	0/0:28,1:29:12.98:0,13,765	0/0:31,0:31:57.19:0,57,953	0/0:49,0:56:92.81:0,93,1528	0/0:30,0:30:42.14:0,42,703	0/0:48,3:51:23.87:0,24,2029	0/0:25,0:25:36.12:0,36,601	0/0:27,0:27:69.20:0,69,1101
chr10	37020424	.	T	TAC	28554.80	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-6.929;DP=1319;FS=0.533;HRun=0;HaplotypeScore=198.1239;InbreedingCoeff=0.9306;MQ=57.91;MQ0=20;MQRankSum=3.514;QD=30.38;ReadPosRankSum=2.864;VQSLOD=5.5244;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,32:45:99:1691,105,0	1/1:10,9:19:48.15:788,48,0	0/0:50,0:27:33.76:0,34,665	0/0:56,0:32:77.74:0,78,861	0/0:35,0:35:89.27:0,89,1127	1/1:4,33:37:66.22:1123,66,0	1/1:12,41:52:87.29:1480,87,0	1/1:22,41:59:98.18:1905,98,0	0/0:67,0:68:99:0,175,2231	1/1:23,38:60:99:2532,159,0	1/1:1,24:24:45.15:765,45,0	1/1:55,1:55:0.49:47,0,0	1/1:9,40:50:99:1728,102,0	1/1:7,56:63:99:1936,114,0	1/1:17,61:77:99:2501,148,0	0/0:53,0:53:99:0,129,1622	0/0:40,0:42:68.92:0,69,1311	1/1:18,23:43:34.65:1308,35,0	1/1:5,11:18:36.12:602,36,0	1/1:2,33:35:71.97:1225,72,0	1/1:37,86:122:99:4478,274,0	1/1:3,36:40:84.29:1429,84,0	1/1:28,0:28:2.98:49,3,0	1/1:9,16:26:21.07:348,21,0	1/1:1,29:30:72.25:1225,72,0	0/0:56,2:58:48.33:0,48,1723	1/1:9,24:34:84.25:1398,84,0	0/0:17,0:17:32.26:0,32,533
chr10	37020534	.	T	TAC	17379.87	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-17.750;DP=1422;FS=0.236;HRun=0;HaplotypeScore=194.0086;InbreedingCoeff=0.9998;MQ=55.48;MQ0=18;MQRankSum=2.183;QD=34.48;ReadPosRankSum=0.148;VQSLOD=5.3897;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:60,0:60:99:0,124,1796	1/1:1,21:24:48.16:815,48,0	0/0:63,0:33:50.77:0,51,635	0/0:77,0:35:68.67:0,69,731	0/0:38,0:38:90.25:0,90,1151	0/0:41,0:42:86.67:0,87,1083	0/0:31,0:31:81.11:0,81,1052	1/1:16,45:60:99:1980,127,0	0/0:66,0:66:99:0,174,2194	0/0:71,0:69:99:0,150,1917	0/0:37,0:37:93.28:0,93,1189	0/0:78,0:78:99:0,168,2170	1/1:3,36:41:81.28:1377,81,0	1/1:17,24:41:99:1728,102,0	0/0:55,0:55:99:0,138,1763	0/0:42,0:41:99:0,105,1349	0/0:31,0:28:54.17:0,54,701	0/0:43,0:43:97.44:0,97,1233	1/1:23,10:24:44.79:654,45,0	1/1:16,29:44:96.29:1574,96,0	1/1:46,83:122:99:4935,301,0	1/1:6,40:50:93.17:1578,93,0	0/0:40,0:40:93.30:0,93,1209	0/0:67,0:69:99:0,120,1529	1/1:18,23:40:92.89:1495,93,0	0/0:51,0:51:99:0,132,1674	1/1:5,28:35:56.38:1244,56,0	0/0:22,0:22:26.59:0,27,492
chr10	37020787	.	TCA	T	2879.66	PASS	AB=0.984;AC=7;AF=0.125;AN=56;BaseQRankSum=2.901;DP=1059;FS=0.426;HRun=0;HaplotypeScore=196.3905;InbreedingCoeff=0.8028;MQ=55.99;MQ0=25;MQRankSum=5.701;QD=15.74;ReadPosRankSum=2.651;VQSLOD=3.6686;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:84.05:0,84,1321	0/0:18,0:18:48.11:0,48,752	0/1:62,0:10:16.39:16,0,133	0/0:68,1:19:5.30:0,5,168	0/0:26,0:26:63.20:0,63,1024	0/0:18,0:18:14.45:0,14,174	0/0:45,0:45:99:0,111,1838	0/0:50,0:49:99:0,111,1709	0/0:33,0:34:87.17:0,87,1426	0/0:46,0:46:94.51:0,95,1515	0/0:28,0:28:29.45:0,29,472	1/1:8,33:41:60.50:847,61,0	0/0:31,0:31:84.26:0,84,1353	0/0:25,0:25:63.22:0,63,1043	0/0:33,0:33:33:0,33,551	0/0:23,0:23:57.16:0,57,899	0/0:38,0:38:99:0,108,1790	0/0:27,0:26:52.44:0,52,904	0/0:24,0:21:51.17:0,51,847	0/0:33,0:31:87.30:0,87,1438	0/0:116,0:115:99:0,258,4181	0/0:36,0:36:99:0,102,1685	1/1:3,19:22:39.53:508,40,0	1/1:22,35:57:99:1657,129,0	0/0:24,0:24:60.21:0,60,1004	0/0:42,0:42:99:0,111,1796	0/0:26,0:26:68.89:0,69,1079	0/0:15,0:15:27.98:0,28,450
chr10	37020812	.	TTCACACCACACACACAC	T	3807.81	PASS	AB=0.900;AC=13;AF=0.232;AN=56;BaseQRankSum=5.855;DP=983;FS=1.596;HRun=0;HaplotypeScore=424.9482;InbreedingCoeff=0.7680;MQ=55.99;MQ0=19;MQRankSum=-2.251;QD=17.00;ReadPosRankSum=-3.684;VQSLOD=0.3716;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:43,3:44:11.29:377,11,0	0/0:20,0:20:54.19:0,54,2746	0/0:55,0:7:6.01:0,6,144	0/0:62,0:15:8.01:0,8,126	0/0:27,0:27:63.22:0,63,2550	1/1:2,12:14:5.94:136,6,0	1/1:30,0:30:34.20:420,34,0	0/0:31,0:29:63.22:0,63,1646	0/0:30,0:31:68.94:0,69,3181	1/1:10,41:51:99:2020,103,0	1/1:5,27:32:1.85:5,2,0	0/0:34,0:34:71.99:0,72,3155	0/0:33,0:33:92.31:0,92,4467	0/0:28,0:28:63.22:0,63,3023	1/1:8,25:33:4.38:139,4,0	0/0:24,0:24:48.16:0,48,2543	0/0:37,0:37:90.28:0,90,4164	0/1:16,2:17:86.64:712,0,87	0/0:27,0:22:48.15:0,48,1688	0/0:34,0:32:81.28:0,81,3689	0/0:99,0:97:99:0,196,9004	0/0:37,0:37:90.28:0,90,3629	0/0:24,0:24:44.56:0,45,1907	0/0:59,0:58:99:0,136,6509	0/0:20,0:20:36.12:0,36,1805	0/0:38,0:38:84.27:0,84,3924	0/0:25,0:26:59.82:0,60,2389	0/0:11,0:11:33.11:0,33,1161
chr10	37020815	.	ACAC	A	375.91	PASS	AB=0.963;AC=5;AF=0.089;AN=56;BaseQRankSum=7.616;DP=987;FS=4.179;HRun=0;HaplotypeScore=219.2715;InbreedingCoeff=0.0735;MQ=55.28;MQ0=21;MQRankSum=-5.330;QD=3.39;ReadPosRankSum=-1.274;VQSLOD=2.1106;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,9:44:3.65:0,4,287	0/0:21,0:21:57.20:0,57,1291	0/0:57,0:7:16.29:0,16,297	0/0:62,0:14:12.87:0,13,239	0/0:30,0:30:90.29:0,90,1793	0/1:15,0:15:40.09:40,0,46	0/0:29,3:32:58.58:0,59,529	0/0:31,0:29:84.29:0,84,1697	0/0:30,0:30:84.14:0,84,1762	0/1:50,0:50:99:364,0,179	1/1:30,0:30:0.04:1,0,0	0/0:32,0:32:90.22:0,90,1807	0/0:34,0:34:92.71:0,93,2105	0/0:30,0:29:75.26:0,75,1598	0/0:32,0:32:5.03:0,5,173	0/0:24,0:24:60.17:0,60,1214	0/0:34,0:34:96.30:0,96,2093	0/1:14,2:15:70.66:71,0,163	0/0:27,0:22:54.18:0,54,1147	0/0:37,0:35:99:0,102,2150	0/0:98,0:97:99:0,256,5245	0/0:37,0:37:99:0,108,2256	0/0:23,0:23:53.51:0,54,1130	0/0:63,0:61:99:0,155,3335	0/0:20,0:20:57.19:0,57,1102	0/0:38,0:38:99:0,107,2145	0/0:25,0:25:68.87:0,69,1448	0/0:11,0:11:33.11:0,33,748
chr10	37020818	.	CCA	C	839.84	PASS	AB=0.970;AC=9;AF=0.161;AN=56;BaseQRankSum=5.227;DP=981;FS=6.210;HRun=0;HaplotypeScore=202.5532;InbreedingCoeff=0.3679;MQ=55.16;MQ0=21;MQRankSum=-2.112;QD=3.96;ReadPosRankSum=-0.209;VQSLOD=2.2893;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:39,7:46:43.66:158,0,44	0/0:20,0:20:60.21:0,60,1016	0/0:60,0:7:6.02:0,6,89	0/0:65,1:14:10.99:0,11,132	0/0:31,0:31:81.28:0,81,1320	0/1:14,0:14:4.87:5,0,12	1/1:28,2:32:35.91:339,36,0	0/0:32,0:30:72.24:0,72,1187	0/0:31,0:31:75.10:0,75,1241	0/1:43,1:44:64.31:299,0,64	0/1:28,0:28:0.06:1,0,0	0/0:36,0:36:87.21:0,87,1382	0/0:33,0:33:93.30:0,93,1525	0/0:28,0:27:66.23:0,66,1117	1/1:30,0:30:2.97:24,3,0	0/0:20,0:20:48.16:0,48,816	0/0:34,0:34:96.30:0,96,1558	0/1:15,0:15:98.02:150,0,98	0/0:26,0:22:57.18:0,57,924	0/0:37,0:36:93.32:0,93,1540	0/0:96,0:95:99:0,204,3554	0/0:37,0:37:90.28:0,90,1468	0/0:22,0:22:44.85:0,45,763	0/0:61,0:60:99:0,148,2451	0/0:19,0:19:36.12:0,36,608	0/0:39,1:40:63.29:0,63,1571	0/0:27,0:27:68.87:0,69,1092	0/0:11,0:11:33.11:0,33,544
chr10	37020826	.	A	ACT	912.53	PASS	AB=0.946;AC=8;AF=0.143;AN=56;BaseQRankSum=4.778;DP=957;FS=11.468;HRun=0;HaplotypeScore=199.7452;InbreedingCoeff=0.1892;MQ=52.95;MQ0=26;MQRankSum=-0.636;QD=4.85;ReadPosRankSum=-3.507;VQSLOD=1.3013;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:40,6:44:59.14:198,0,59	0/0:23,0:23:69.18:0,69,988	0/0:58,0:4:9.03:0,9,118	0/0:79,0:14:3.70:0,4,153	0/0:32,0:32:93.23:0,93,1305	0/0:15,0:15:8.68:0,9,54	0/1:28,0:28:57.62:247,0,58	0/0:27,0:25:72.23:0,72,1074	0/0:29,0:29:84.07:0,84,1183	0/1:43,0:43:99:381,0,252	1/1:28,0:28:0.94:3,1,0	0/0:34,0:34:90.18:0,90,1273	0/0:33,0:33:99:0,99,1435	0/0:27,0:26:75.21:0,75,1081	1/1:25,0:25:3.01:47,3,0	0/0:18,0:18:54.16:0,54,783	0/0:38,0:38:99:0,111,1550	0/1:16,2:17:99:158,0,174	0/0:28,0:23:66.16:0,66,903	0/0:37,0:37:99:0,102,1482	0/0:86,0:86:99:0,230,3329	0/0:33,0:33:93.27:0,93,1352	0/0:18,0:18:45.15:0,45,688	0/0:62,0:60:99:0,156,2307	0/0:14,0:14:39.12:0,39,573	0/0:39,0:39:99:0,111,1550	0/0:27,0:27:75.16:0,75,1043	0/0:11,0:11:33.11:0,33,493
chr10	37021017	.	GAA	G	4110.93	PASS	AB=0.607;AC=21;AF=0.375;AN=56;BaseQRankSum=6.147;DP=647;FS=12.603;HRun=12;HaplotypeScore=89.9739;InbreedingCoeff=0.9031;MQ=59.08;MQ0=10;MQRankSum=3.095;QD=16.06;ReadPosRankSum=1.809;VQSLOD=1.2369;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:47:99:0,119,1461	1/1:2,6:8:14.70:132,15,0	0/0:10,0:3:6.22:0,6,47	0/0:9,0:7:14.84:0,15,189	0/0:29,0:32:80.89:0,81,928	0/0:23,0:22:55.05:0,55,768	0/0:22,0:22:56.21:0,56,694	1/1:10,22:30:57.07:571,57,0	0/0:14,0:14:36.05:0,36,448	0/0:27,0:28:59.61:0,60,796	0/0:16,0:16:33.10:0,33,452	0/0:15,0:15:33.40:0,33,420	1/1:2,12:14:29.73:282,30,0	1/1:5,21:25:38.94:379,39,0	0/0:14,0:15:39.11:0,39,527	0/0:20,0:20:54.16:0,54,765	0/0:39,0:41:90.64:0,91,1100	0/0:18,1:19:14.62:0,15,569	1/1:2,24:26:63.71:678,64,0	1/1:8,18:26:44.83:432,45,0	1/1:10,21:32:45.01:457,45,0	1/1:7,19:28:38.30:467,38,0	0/0:19,0:19:40.67:0,41,460	0/0:32,0:31:74.50:0,74,1001	1/1:4,20:24:32.25:387,32,0	0/0:6,0:25:42.79:0,43,165	1/1:7,15:20:14.47:314,14,0	0/1:6,1:15:12.54:13,0,35
chr10	37023874	.	AT	A	5695.54	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-1.411;DP=528;FS=0.350;HRun=4;HaplotypeScore=78.0970;InbreedingCoeff=0.9791;MQ=82.47;MQ0=1;MQRankSum=-1.694;QD=24.44;ReadPosRankSum=0.341;VQSLOD=3.5138;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:93.09:0,93,868	1/1:2,11:13:33.07:379,33,0	0/0:24,0:20:45.27:0,45,421	0/0:20,1:15:21.39:0,21,217	0/0:23,0:23:63.18:0,63,831	0/0:23,0:23:57.06:0,57,533	0/0:14,0:14:36.04:0,36,335	1/1:2,24:26:73.08:840,73,0	0/0:16,0:16:45.59:0,46,582	0/0:26,0:26:71.91:0,72,654	0/0:8,0:8:23.92:0,24,211	1/1:7,0:7:13.04:58,13,0	1/1:0,12:12:27.08:316,27,0	1/1:2,16:18:36.11:430,36,0	0/0:20,0:19:48.04:0,48,446	0/0:12,0:12:33.10:0,33,443	0/0:16,1:17:10.22:0,10,514	0/0:26,0:26:72.03:0,72,660	1/1:2,17:19:48.06:514,48,0	1/1:1,24:25:62.81:662,63,0	1/1:0,8:8:18.06:215,18,0	1/1:0,14:14:36.03:398,36,0	1/1:17,0:17:19.07:87,19,0	1/1:10,0:10:24.55:128,25,0	1/1:3,29:32:72.22:862,72,0	0/0:24,0:24:69.19:0,69,889	1/1:2,30:32:54.69:807,55,0	0/0:5,0:5:9.03:0,9,126
chr10	37023877	.	T	TAA	787.15	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=-0.113;DP=533;FS=4.013;HRun=0;HaplotypeScore=108.3856;InbreedingCoeff=0.7849;MQ=82.36;MQ0=2;MQRankSum=-2.914;QD=17.89;ReadPosRankSum=-1.764;VQSLOD=3.1631;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:51.71:0,52,276	0/0:13,0:13:33.88:0,34,188	0/0:27,0:22:41.73:0,42,644	0/0:20,0:14:27.94:0,28,259	0/0:26,0:26:72.24:0,72,1140	0/0:25,0:25:42.22:0,42,282	0/0:14,0:14:17.24:0,17,153	0/0:27,0:27:72.14:0,72,378	0/0:17,0:17:48.16:0,48,775	0/0:26,0:26:7.86:0,8,288	0/1:9,0:9:24.55:25,0,65	1/1:0,7:7:15.05:217,15,0	0/0:13,0:13:25.69:0,26,133	0/0:16,0:16:34.05:0,34,167	0/0:18,0:17:42.51:0,43,252	0/0:11,0:11:33.11:0,33,536	0/0:17,0:17:48.03:0,48,733	0/0:26,0:26:53.03:0,53,326	0/0:17,0:17:29.65:0,30,151	0/0:26,0:26:45.03:0,45,317	0/0:8,0:8:17.04:0,17,84	0/0:15,0:15:14.50:0,14,140	1/1:5,11:18:28.98:367,29,0	1/1:3,7:10:22.83:325,23,0	0/0:30,0:30:68.18:0,68,336	0/0:24,0:24:69.23:0,69,1100	0/0:33,0:33:74.33:0,74,401	0/0:3,0:3:9.03:0,9,147
chr10	37023878	.	T	TAA	6236.16	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-11.543;DP=551;FS=0.000;HRun=10;HaplotypeScore=94.3210;InbreedingCoeff=0.9673;MQ=82.48;MQ0=2;MQRankSum=-1.496;QD=31.18;ReadPosRankSum=1.322;VQSLOD=5.0675;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,34:37:86.78:1261,87,0	0/0:13,0:13:35.35:0,35,244	0/0:26,0:22:19.54:0,20,232	0/0:21,0:15:4.69:0,5,97	0/0:27,0:27:69.08:0,69,687	1/1:3,22:28:47.64:663,48,0	1/1:2,13:15:30.10:448,30,0	0/0:29,0:29:68.01:0,68,467	0/0:16,0:17:38.77:0,39,370	1/1:3,22:29:74.65:1000,75,0	1/1:1,8:10:27.05:371,27,0	1/1:8,0:8:18.06:262,18,0	0/0:13,0:13:29.42:0,29,188	0/0:16,0:16:35.46:0,35,228	1/1:4,15:18:39.13:582,39,0	0/0:11,0:11:27.04:0,27,275	0/0:18,0:18:47.97:0,48,465	1/1:4,21:26:60.20:878,60,0	0/0:18,0:18:32.49:0,32,210	0/0:26,0:26:59.01:0,59,402	0/0:9,0:9:17.70:0,18,113	0/0:15,0:15:35.53:0,36,243	1/1:17,0:18:33.55:458,34,0	1/1:10,0:10:21.07:313,21,0	0/0:31,0:31:70.91:0,71,458	0/0:23,0:23:54.10:0,54,549	0/0:34,0:34:76.97:0,77,525	0/0:3,0:3:9.02:0,9,92
chr10	37024148	.	AGCC	A	1023.16	PASS	AB=0.620;AC=3;AF=0.054;AN=56;BaseQRankSum=9.714;DP=643;FS=5.083;HRun=0;HaplotypeScore=111.9982;InbreedingCoeff=0.0361;MQ=83.46;MQ0=0;MQRankSum=-8.717;QD=15.99;ReadPosRankSum=0.330;VQSLOD=3.2444;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,99,2133	0/0:8,0:8:24.08:0,24,542	0/0:17,0:17:44.92:0,45,865	0/0:24,0:23:53.13:0,53,1310	0/0:17,0:17:44.97:0,45,904	0/0:23,0:23:64.88:0,65,1273	0/0:37,0:37:99:0,105,2081	0/0:17,0:18:42.01:0,42,811	0/0:25,0:25:75.24:0,75,1621	0/0:18,0:18:48.16:0,48,1069	0/0:3,0:3:8.82:0,9,124	0/1:9,21:30:9.67:678,0,10	0/0:24,0:24:69.22:0,69,1512	0/0:33,0:33:90.21:0,90,1883	0/0:30,0:30:87.14:0,87,1776	0/0:19,0:19:54.12:0,54,1064	0/0:43,0:43:99:0,126,2692	0/0:43,0:42:99:0,126,2838	0/0:19,0:19:47.93:0,48,825	0/0:10,0:10:20.93:0,21,330	0/0:51,0:51:99:0,144,3062	0/0:14,0:14:32.60:0,33,705	0/1:4,10:14:12.36:261,0,12	0/1:11,9:20:51.65:184,0,52	0/0:14,0:14:35.99:0,36,753	0/0:16,0:16:42.10:0,42,868	0/0:30,0:30:87.28:0,87,1876	0/0:8,0:8:24.07:0,24,499
chr10	37024160	.	CTGCCACATGA	C	3009.46	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=10.344;DP=726;FS=3.830;HRun=0;HaplotypeScore=225.5412;InbreedingCoeff=0.9909;MQ=82.94;MQ0=0;MQRankSum=-9.857;QD=71.65;ReadPosRankSum=3.322;VQSLOD=3.5499;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,144,7375	0/0:10,0:10:30.09:0,30,1390	0/0:19,0:19:57.19:0,57,2247	0/0:26,0:26:75.26:0,75,2913	0/0:24,0:24:69.24:0,69,3436	0/0:27,0:27:81.25:0,81,3342	0/0:33,0:33:99:0,99,5029	0/0:20,0:20:60.21:0,60,2915	0/0:29,0:29:87.30:0,87,4482	0/0:27,0:27:78.27:0,78,3947	0/0:6,0:6:15.05:0,15,802	1/1:2,21:23:69.22:1921,69,0	0/0:27,0:27:78.25:0,78,3908	0/0:31,0:31:93.31:0,93,4793	0/0:30,0:30:90.30:0,90,4550	0/0:17,0:17:51.18:0,51,2681	0/0:42,0:42:99:0,123,6302	0/0:44,0:43:99:0,132,6882	0/0:20,0:20:60.21:0,60,3125	0/0:14,0:14:42.14:0,42,2203	0/0:68,0:68:99:0,202,10126	0/0:23,0:23:62.90:0,63,2912	1/1:0,10:10:30.02:706,30,0	1/1:0,9:9:17.94:524,18,0	0/0:24,0:24:72.25:0,72,3466	0/0:28,0:28:84.29:0,84,4143	0/0:34,0:34:99:0,99,4907	0/0:11,0:11:33.11:0,33,1659
chr10	37026568	.	C	CTGCCGG	22743.48	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-5.193;DP=669;FS=3.547;HRun=0;HaplotypeScore=150.2393;InbreedingCoeff=0.9991;MQ=84.09;MQ0=0;MQRankSum=-18.567;QD=78.16;ReadPosRankSum=-2.565;VQSLOD=4.7849;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,132,3129	1/1:3,5:9:21.07:754,21,0	0/0:24,0:24:66.17:0,66,1400	0/0:27,0:27:68.88:0,69,1425	0/0:20,0:20:60.21:0,60,1439	0/0:22,0:22:60.21:0,60,1390	0/0:24,0:24:69.21:0,69,1514	1/1:8,20:34:99:2906,99,0	0/0:25,0:25:66.23:0,66,1581	0/0:27,0:26:75.26:0,75,1788	0/0:12,0:12:33.10:0,33,745	1/1:6,25:32:84.29:2865,84,0	1/1:7,15:22:66.22:2159,66,0	1/1:4,20:26:72.25:2359,72,0	0/0:26,0:26:75.24:0,75,1751	0/0:19,0:19:54.17:0,54,1249	0/0:46,0:46:99:0,132,3096	0/0:24,0:24:72.25:0,72,1731	1/1:12,15:31:84.19:2515,84,0	1/1:2,17:19:48.16:1714,48,0	1/1:9,16:31:32.98:1114,33,0	1/1:4,10:15:33.11:1161,33,0	1/1:2,11:15:36.08:1203,36,0	1/1:5,16:22:41.23:1436,41,0	1/1:3,10:15:33.11:1143,33,0	0/0:26,0:26:78.27:0,78,1872	1/1:6,13:20:44.86:1415,45,0	0/0:9,0:9:27.09:0,27,649
chr10	37027873	.	AGT	A	325.48	PASS	AB=0.974;AC=12;AF=0.273;AN=44;BaseQRankSum=0.628;DP=542;FS=5.680;HRun=0;HaplotypeScore=83.8553;InbreedingCoeff=0.4870;MQ=58.97;MQ0=13;MQRankSum=-0.008;QD=2.67;ReadPosRankSum=0.364;VQSLOD=1.2207;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:9:0,9,92	0/0:6,0:6:3.01:0,3,38	./.	./.	./.	0/0:14,0:14:5.99:0,6,49	0/0:23,0:23:5.72:0,6,29	./.	./.	0/0:16,0:16:3:0,3,29	./.	1/1:16,1:17:3.01:32,3,0	0/0:21,0:21:5.96:0,6,51	0/0:14,0:14:3:0,3,26	0/0:22,0:22:9:0,9,93	1/1:17,8:25:18.05:190,18,0	1/1:17,0:16:5.85:46,6,0	0/1:17,1:17:13.73:14,0,134	0/0:27,0:26:5.98:0,6,56	0/1:13,0:12:0:0,0,0	0/0:46,0:46:11.87:0,12,135	0/0:16,0:15:3.01:0,3,42	1/1:5,2:8:8.86:77,9,0	1/1:17,2:24:14.53:105,15,0	0/0:16,0:16:6:0,6,51	0/0:28,0:27:20.77:0,21,159	0/0:21,0:21:4.25:0,4,29	0/0:14,0:14:18.04:0,18,220
chr10	37027925	.	T	TGTGTGC	3218.59	PASS	AB=1.000;AC=28;AF=0.500;AN=56;BaseQRankSum=1.192;DP=530;FS=34.116;HRun=0;HaplotypeScore=126.9241;InbreedingCoeff=0.6489;MQ=58.48;MQ0=13;MQRankSum=-2.316;QD=10.91;ReadPosRankSum=-1.209;VQSLOD=0.6570;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:22:44.81:45,0,226	1/1:8,0:8:17.77:145,18,0	0/0:32,0:23:52.41:0,52,618	0/0:37,0:28:77.27:0,77,840	0/0:7,0:7:14.97:0,15,121	0/0:18,0:18:35.66:0,36,297	0/0:22,0:22:36.26:0,36,295	1/1:14,0:12:32.73:237,33,0	0/0:16,0:15:37.88:0,38,288	0/0:15,0:15:44.86:0,45,392	0/0:9,0:9:11.98:0,12,98	1/1:20,0:20:28.38:294,28,0	1/1:23,0:23:44.15:369,44,0	1/1:1,13:15:3.01:105,3,0	0/0:19,0:19:43.51:0,44,400	0/0:24,0:24:63:0,63,681	0/0:18,0:17:23.02:0,23,284	0/0:18,0:16:8.37:0,8,285	1/1:14,0:14:36.07:306,36,0	1/1:18,0:18:32.24:238,32,0	1/1:36,0:33:54.25:409,54,0	1/1:8,0:8:17.93:141,18,0	1/1:14,0:14:5.94:185,6,0	0/1:29,0:29:33.82:273,0,34	1/1:23,0:23:41.77:395,42,0	0/1:23,0:22:90.43:90,0,296	1/1:2,0:16:8.68:78,9,0	0/1:12,0:12:99:121,0,104
chr10	37028015	.	TA	T	1786.24	PASS	AB=0.732;AC=6;AF=0.107;AN=56;BaseQRankSum=8.906;DP=622;FS=31.107;HRun=2;HaplotypeScore=83.2886;InbreedingCoeff=-0.1317;MQ=68.11;MQ0=2;MQRankSum=-8.093;QD=10.89;ReadPosRankSum=0.391;VQSLOD=0.1891;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:22,10:32:99:240,0,695	0/0:6,0:6:18.06:0,18,268	0/0:31,0:27:64.82:0,65,851	0/0:31,0:26:50.21:0,50,784	0/0:21,0:21:63.21:0,63,936	0/1:18,6:24:99:247,0,515	0/1:13,7:20:99:207,0,398	0/0:20,0:20:60.16:0,60,794	0/0:14,0:14:42.09:0,42,586	0/1:15,7:22:99:244,0,498	0/1:15,16:31:99:490,0,470	0/0:12,0:12:33.09:0,33,471	0/0:20,0:20:60.14:0,60,847	0/0:15,0:15:39.12:0,39,563	0/1:18,17:34:99:482,0,434	0/0:17,0:17:48.15:0,48,697	0/0:31,0:30:84.27:0,84,1217	0/0:13,2:15:0.29:0,0,431	0/0:33,0:31:93.21:0,93,1356	0/0:22,0:22:60.14:0,60,797	0/0:15,0:15:45.11:0,45,608	0/0:18,0:18:54.18:0,54,806	0/0:16,0:16:48.16:0,48,711	0/0:33,0:33:96.26:0,96,1364	0/0:25,0:25:72.23:0,72,1052	0/0:31,0:31:87.22:0,87,1237	0/0:25,0:25:63.19:0,63,903	0/0:6,0:6:18.06:0,18,268
chr10	37028201	.	TCC	T	6253.61	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=5.597;DP=511;FS=4.331;HRun=8;HaplotypeScore=91.6927;InbreedingCoeff=0.9936;MQ=75.99;MQ0=0;MQRankSum=-2.929;QD=28.43;ReadPosRankSum=3.422;VQSLOD=4.9485;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:96.31:0,96,1583	1/1:0,4:4:12.04:146,12,0	0/0:18,0:18:39.95:0,40,512	0/0:15,0:14:26.97:0,27,391	0/0:1,0:21:42.23:0,42,148	0/0:17,0:17:48.16:0,48,792	0/0:24,0:24:47.51:0,48,1113	1/1:6,12:17:33.09:402,33,0	0/0:1,0:16:32.16:0,32,112	0/0:15,0:15:42.14:0,42,687	0/0:18,0:18:48.12:0,48,776	1/1:1,18:19:48.15:585,48,0	1/1:0,15:15:42.13:512,42,0	1/1:0,14:14:36.11:439,36,0	0/0:25,0:25:66.23:0,66,1116	0/0:1,0:15:27.45:0,27,96	0/0:1,0:24:44.92:0,45,158	0/0:17,0:17:42.14:0,42,705	1/1:4,16:19:42.08:476,42,0	1/1:1,19:20:54.17:657,54,0	1/1:2,14:16:33.10:402,33,0	1/1:3,11:14:27.08:329,27,0	1/1:1,11:12:24.07:293,24,0	1/1:0,21:21:42.13:512,42,0	1/1:2,23:25:63.20:768,63,0	0/0:3,0:17:37.12:0,37,175	1/1:0,22:22:60.19:732,60,0	0/0:2,0:10:17.47:0,17,61
chr10	37028368	.	AACAC	A	4153.66	PASS	AB=0.991;AC=23;AF=0.411;AN=56;BaseQRankSum=2.373;DP=690;FS=2.228;HRun=0;HaplotypeScore=162.1946;InbreedingCoeff=0.2454;MQ=62.42;MQ0=23;MQRankSum=-1.862;QD=11.35;ReadPosRankSum=0.232;VQSLOD=3.4919;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:27,5:32:45.03:572,45,0	0/1:12,0:12:14.46:14,0,46	0/0:54,0:26:7.08:0,7,109	0/0:41,0:23:24.24:0,24,287	0/0:20,0:19:29.89:0,30,546	1/1:17,3:18:38.04:469,38,0	1/1:24,3:27:56.75:609,57,0	0/0:21,0:21:7.13:0,7,52	0/0:22,0:23:59.26:0,59,1157	1/1:16,1:33:48.80:729,49,0	1/1:10,3:13:14.94:193,15,0	0/1:18,0:18:40.58:41,0,57	0/1:20,0:20:11.60:66,0,12	0/1:23,0:23:11.42:66,0,11	1/1:25,8:33:63.96:933,64,0	0/0:15,0:15:27.06:0,27,560	0/0:29,0:29:68.50:0,69,1262	0/1:19,0:20:8.44:381,0,8	1/1:17,0:15:1.19:13,1,0	0/1:14,0:14:17.39:17,0,38	0/0:42,0:39:5.85:0,6,47	0/1:19,0:19:14.44:14,0,61	0/0:22,0:22:1.73:0,2,21	0/1:37,0:36:9.46:9,0,97	0/0:24,0:24:20.15:0,20,151	0/1:22,0:23:25.97:26,0,323	0/0:16,0:16:4.69:0,5,24	0/0:9,0:15:8.04:0,8,97
chr10	37028392	.	CAT	C	7955.28	PASS	AB=0.995;AC=49;AF=0.875;AN=56;BaseQRankSum=9.487;DP=673;FS=0.000;HRun=0;HaplotypeScore=156.4731;InbreedingCoeff=0.2378;MQ=47.77;MQ0=26;MQRankSum=-2.997;QD=12.09;ReadPosRankSum=-3.750;VQSLOD=4.0426;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:33,0:32:63.38:382,63,0	1/1:8,1:9:17.69:132,18,0	0/1:16,0:6:3.23:22,0,3	0/1:24,0:8:9.98:10,0,57	0/1:17,0:17:26.46:26,0,357	1/1:20,0:18:39.92:264,40,0	1/1:29,0:28:60.39:401,60,0	1/1:19,0:17:26.64:262,27,0	0/1:27,0:27:14.25:14,0,722	1/1:30,0:29:72.95:443,73,0	1/1:15,0:15:25.30:143,25,0	1/1:12,3:15:41.58:306,42,0	1/1:13,3:16:42.58:319,43,0	1/1:21,2:23:48.53:347,49,0	1/1:36,0:35:89.41:560,89,0	0/0:15,0:15:25.15:0,25,485	0/1:36,1:37:38.38:38,0,875	1/1:22,0:21:42.88:288,43,0	1/1:16,2:17:46.85:346,47,0	1/1:14,2:15:24.69:181,25,0	1/1:58,3:54:99:807,104,0	1/1:18,3:21:43.64:312,44,0	1/1:16,1:17:44.79:352,45,0	1/1:41,3:41:77.48:572,77,0	1/1:25,1:26:51.02:378,51,0	1/1:34,0:31:74.20:568,74,0	1/1:17,1:18:43.23:305,43,0	1/1:14,0:13:25.65:178,26,0
chr10	37028394	.	TAC	T	2620.78	PASS	AB=0.997;AC=32;AF=0.571;AN=56;BaseQRankSum=4.111;DP=680;FS=0.000;HRun=0;HaplotypeScore=175.6356;InbreedingCoeff=0.3427;MQ=47.39;MQ0=28;MQRankSum=-1.072;QD=5.68;ReadPosRankSum=-0.481;VQSLOD=3.1191;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:29,5:33:28.67:400,29,0	1/1:8,0:8:1.44:11,1,0	0/0:17,0:6:2.94:0,3,18	0/1:28,0:7:1.16:1,0,3	0/0:15,0:15:32.11:0,32,312	1/1:15,5:18:21.23:283,21,0	1/1:25,3:27:37.76:304,38,0	0/0:20,0:18:9.82:0,10,45	0/0:27,0:27:24.18:0,24,676	1/1:26,5:30:47.02:439,47,0	1/1:11,4:15:15.13:150,15,0	1/1:16,0:16:3.08:21,3,0	0/1:16,0:16:10.95:26,0,11	1/1:22,0:22:3.47:33,3,0	1/1:26,10:35:59.72:665,60,0	0/0:15,0:15:4.82:0,5,502	0/0:37,1:38:25.47:0,25,973	1/1:21,1:21:13.16:313,13,0	0/1:20,0:19:2.48:2,0,56	0/1:17,0:16:3.96:4,0,38	0/0:63,0:56:3.01:0,3,26	0/1:20,0:20:3.99:4,0,36	1/1:17,0:17:4.53:15,5,0	0/1:44,0:41:5.10:5,0,21	0/0:24,0:24:5.29:0,5,28	0/1:34,1:32:62.15:62,0,93	0/1:18,0:18:12.36:12,0,13	1/1:14,0:13:1.27:44,1,0
chr10	37028408	.	CACACACACACAA	C	2533.67	PASS	AB=0.989;AC=20;AF=0.357;AN=56;BaseQRankSum=6.878;DP=724;FS=3.921;HRun=0;HaplotypeScore=305.4773;InbreedingCoeff=0.4224;MQ=51.49;MQ0=21;MQRankSum=1.816;QD=7.12;ReadPosRankSum=-1.806;VQSLOD=1.8358;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:39:48.28:0,48,1015	0/1:9,0:9:12.80:145,0,13	0/1:18,0:8:1.37:1,0,52	0/0:33,0:13:19.08:0,19,207	0/0:16,0:16:31.87:0,32,968	0/0:22,0:20:38.28:0,38,555	0/0:27,0:27:26.79:0,27,635	0/0:21,0:19:8.90:0,9,79	0/0:29,0:29:74.88:0,75,2380	0/1:30,0:29:5.25:5,0,585	0/0:16,0:16:23.43:0,23,350	0/1:23,0:23:25.88:26,0,139	1/1:17,0:17:8.55:355,9,0	1/1:23,2:25:18.70:354,19,0	0/0:35,0:34:46.83:0,47,1080	0/0:18,0:18:48.16:0,48,1383	0/0:39,0:39:85.33:0,85,3398	0/0:23,0:22:40.42:0,40,560	0/1:30,0:29:99:312,0,129	0/1:18,2:19:6.64:202,0,7	1/1:71,0:67:25.70:472,26,0	1/1:19,1:20:23.27:248,23,0	0/1:18,0:18:6.72:7,0,85	0/1:37,0:34:87.01:213,0,87	1/1:21,0:21:22.75:181,23,0	0/0:39,0:36:41.20:0,41,1577	1/1:17,0:17:23.76:202,24,0	0/0:10,0:9:9.03:0,9,310
chr10	37028414	.	CACACAA	C	4194.43	PASS	AB=1.000;AC=28;AF=0.500;AN=56;BaseQRankSum=11.756;DP=729;FS=7.593;HRun=0;HaplotypeScore=227.7707;InbreedingCoeff=0.3022;MQ=54.25;MQ0=21;MQRankSum=-1.339;QD=8.26;ReadPosRankSum=-1.844;VQSLOD=1.5246;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:39:13.17:0,13,627	0/1:9,0:9:12.80:107,0,13	0/0:22,0:12:2.34:0,2,101	0/1:31,0:12:0.28:0,0,107	0/0:18,0:18:21.62:0,22,583	0/1:21,0:19:65.14:65,0,226	0/0:31,0:31:32.70:0,33,591	0/1:24,0:22:62.88:146,0,63	0/0:32,0:32:71.28:0,71,1586	0/1:29,0:29:99:128,0,298	0/0:13,0:14:8.37:0,8,166	1/1:22,3:25:32.71:310,33,0	1/1:16,0:16:32.26:320,32,0	1/1:27,0:27:49.52:373,50,0	0/1:35,0:34:99:204,0,369	0/0:18,0:18:48.12:0,48,972	0/0:37,0:37:89.83:0,90,2174	0/1:24,0:23:37.81:38,0,242	0/1:29,0:26:48.92:278,0,49	0/1:19,0:18:2.13:127,0,2	1/1:71,0:67:84.66:763,85,0	1/1:21,0:21:33.39:294,33,0	1/1:15,1:16:26.88:199,27,0	1/1:36,1:34:40.40:320,40,0	1/1:20,0:20:28.63:230,29,0	0/1:40,0:37:85.48:85,0,596	1/1:14,0:14:32.42:208,32,0	0/0:9,0:8:8.52:0,9,120
chr10	37029011	.	T	TCAG	21934.91	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-6.940;DP=870;FS=0.826;HRun=0;HaplotypeScore=167.5798;InbreedingCoeff=0.9998;MQ=75.93;MQ0=0;MQRankSum=-1.572;QD=55.53;ReadPosRankSum=2.475;VQSLOD=6.0865;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,129,2117	1/1:0,12:12:36.12:816,36,0	0/0:36,0:36:93.31:0,93,1482	0/0:28,0:28:60.98:0,61,1088	0/0:32,0:32:87.30:0,87,1445	0/0:27,0:27:78.25:0,78,1269	0/0:40,0:40:99:0,108,1796	1/1:9,33:44:99:2583,120,0	0/0:41,0:41:99:0,117,1945	0/0:39,0:39:99:0,108,1775	0/0:24,0:24:69.24:0,69,1147	1/1:3,29:33:81.28:1822,81,0	1/1:3,33:36:93.32:2107,93,0	1/1:2,33:35:99:2216,99,0	0/0:30,0:30:81.23:0,81,1291	0/0:28,0:28:78.27:0,78,1296	0/0:30,0:30:87.30:0,87,1450	0/0:30,0:30:81.26:0,81,1323	1/1:3,23:30:75.26:1632,75,0	1/1:3,16:20:48.16:1074,48,0	1/1:7,44:51:99:2486,111,0	1/1:2,27:29:72.25:1617,72,0	1/1:2,21:23:57.20:1261,57,0	1/1:5,25:30:57.20:1291,57,0	1/1:2,22:24:66.23:1495,66,0	0/0:34,0:34:99:0,102,1665	1/1:0,26:28:69.24:1536,69,0	0/0:9,0:9:27.09:0,27,450
chr10	37029057	.	A	AT	7469.68	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-13.536;DP=828;FS=2.550;HRun=5;HaplotypeScore=138.3379;InbreedingCoeff=0.9942;MQ=78.83;MQ0=0;MQRankSum=-3.013;QD=33.80;ReadPosRankSum=4.139;VQSLOD=2.7155;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,42:43:99:1461,111,0	0/0:12,0:12:27.07:0,27,290	0/0:34,0:33:89.73:0,90,903	0/0:28,0:28:43.08:0,43,467	0/0:24,0:24:72.14:0,72,750	1/1:2,28:30:81.26:1066,81,0	1/1:3,27:30:75.24:987,75,0	0/0:35,0:35:69.08:0,69,717	0/0:50,0:50:99:0,141,1506	1/1:2,32:34:96.29:1232,96,0	1/1:0,16:16:48.16:632,48,0	0/0:37,0:37:96.21:0,96,1014	0/0:44,0:44:99:0,123,1321	0/0:28,0:28:78.20:0,78,838	1/1:3,32:35:78.09:1026,78,0	0/0:33,0:33:96.19:0,96,1006	0/0:30,0:30:90.21:0,90,959	1/1:3,30:33:81.73:1067,82,0	0/0:30,0:30:72.14:0,72,761	0/0:24,0:24:63.16:0,63,676	0/0:45,0:45:99:0,114,1208	0/0:27,0:27:69.09:0,69,718	0/0:21,0:21:51.13:0,51,548	0/0:22,0:22:54.11:0,54,572	0/0:20,0:20:60.15:0,60,645	0/0:30,1:31:44.71:0,45,817	0/0:28,0:28:72.03:0,72,743	0/0:4,0:4:12.03:0,12,129
chr10	37029801	.	TG	T	9827.52	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=19.797;DP=597;FS=11.029;HRun=1;HaplotypeScore=185.9178;InbreedingCoeff=0.9992;MQ=68.49;MQ0=0;MQRankSum=-17.069;QD=38.54;ReadPosRankSum=0.634;VQSLOD=2.4278;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,99,1555	1/1:0,12:12:33.11:460,33,0	0/0:12,0:12:35.85:0,36,515	0/0:11,0:12:31.07:0,31,492	0/0:17,0:17:51.14:0,51,767	0/0:18,0:18:54.18:0,54,862	0/0:28,0:28:84.27:0,84,1320	1/1:0,17:17:51.15:678,51,0	0/0:28,0:28:84.29:0,84,1338	0/0:20,0:20:45.15:0,45,718	0/0:18,0:18:51.16:0,51,786	1/1:0,20:20:60.20:836,60,0	1/1:0,28:28:81.27:1128,81,0	1/1:3,23:26:75.17:1007,75,0	0/0:29,0:29:87.30:0,87,1390	0/0:29,0:29:87.28:0,87,1362	0/0:29,0:29:87.25:0,87,1358	0/0:27,0:27:81.28:0,81,1294	1/1:0,17:17:51.17:710,51,0	1/1:0,14:14:42.10:563,42,0	1/1:2,23:25:75.10:948,75,0	1/1:0,26:26:78.17:1040,78,0	1/1:0,12:12:33.11:455,33,0	1/1:0,17:17:36.12:500,36,0	1/1:0,12:12:33.11:459,33,0	0/0:32,0:32:90.28:0,90,1376	1/1:0,29:29:81.10:1042,81,0	0/0:8,0:8:21.07:0,21,335
chr10	37029810	.	T	TG	2787.62	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=19.449;DP=579;FS=3.351;HRun=1;HaplotypeScore=202.8592;InbreedingCoeff=0.9985;MQ=68.44;MQ0=0;MQRankSum=-18.436;QD=12.56;ReadPosRankSum=2.849;VQSLOD=3.0244;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,114,1457	1/1:10,1:11:30.94:173,31,0	0/0:12,0:12:32.77:0,33,388	0/0:15,0:14:41.91:0,42,480	0/0:21,0:21:63.12:0,63,762	0/0:21,0:21:60.19:0,60,776	0/0:29,0:29:87.23:0,87,1083	1/1:12,2:14:40.67:304,41,0	0/0:27,0:27:78.24:0,78,994	0/0:24,0:24:66.21:0,66,857	0/0:19,0:19:57.09:0,57,705	1/1:18,1:19:53.10:266,53,0	1/1:24,1:25:68.91:302,69,0	1/1:20,2:22:58.01:261,58,0	0/0:30,0:30:90.29:0,90,1168	0/0:26,0:26:78.25:0,78,1012	0/0:30,0:30:90.23:0,90,1121	0/0:26,0:26:78.24:0,78,997	1/1:10,2:12:31.99:247,32,0	1/1:13,1:14:35.88:156,36,0	1/1:18,3:21:45.12:271,45,0	1/1:21,2:23:54.24:228,54,0	1/1:11,1:12:29.40:124,29,0	1/1:11,2:13:30.48:190,30,0	1/1:9,2:11:31.29:179,31,0	0/0:32,0:32:82.56:0,83,1109	1/1:17,8:25:59.43:320,59,0	0/0:7,0:7:18.06:0,18,234
chr10	37029811	.	GCCCCA	G	7811.65	PASS	AB=0.638;AC=23;AF=0.411;AN=56;BaseQRankSum=19.015;DP=577;FS=4.116;HRun=0;HaplotypeScore=229.4596;InbreedingCoeff=0.7781;MQ=68.57;MQ0=0;MQRankSum=-18.196;QD=35.83;ReadPosRankSum=5.764;VQSLOD=4.6299;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,114,3741	1/1:2,9:11:25.77:417,26,0	0/0:12,0:12:36.12:0,36,1056	0/0:16,0:15:42.14:0,42,1169	0/0:21,0:21:63.17:0,63,1909	0/0:22,0:22:66.23:0,66,2153	0/0:29,0:29:87.30:0,87,2880	0/1:6,8:14:18.93:355,0,19	0/0:28,0:28:84.29:0,84,2678	0/0:24,0:24:72.25:0,72,2319	0/0:19,0:19:57.20:0,57,1866	1/1:2,17:19:31.72:770,32,0	1/1:1,24:25:55.32:1089,55,0	1/1:2,19:21:19.33:843,19,0	0/0:30,0:30:90.31:0,90,2981	0/0:27,0:27:81.28:0,81,2653	0/0:30,0:30:90.29:0,90,2840	0/0:26,0:26:78.27:0,78,2545	0/1:6,6:12:43.91:275,0,44	1/1:1,13:14:39.13:603,39,0	1/1:4,15:19:48.10:659,48,0	1/1:2,20:22:42.29:877,42,0	1/1:1,11:12:28.98:450,29,0	1/1:4,9:13:23.22:362,23,0	1/1:3,8:11:30.49:417,30,0	0/0:31,0:31:93.32:0,93,2961	0/1:9,16:25:17.86:695,0,18	0/0:6,0:6:18.06:0,18,600
chr10	37029817	.	GTCTCAC	G	9143.96	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=18.635;DP=543;FS=6.135;HRun=0;HaplotypeScore=222.1307;InbreedingCoeff=0.9977;MQ=73.22;MQ0=0;MQRankSum=-18.204;QD=52.25;ReadPosRankSum=5.086;VQSLOD=4.2199;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,123,4408	1/1:0,9:9:27.09:484,27,0	0/0:14,0:14:39.09:0,39,1226	0/0:20,0:19:46.34:0,46,1721	0/0:20,0:20:60.21:0,60,2215	0/0:22,0:22:66.23:0,66,2480	0/0:30,0:30:90.29:0,90,3181	1/1:0,8:8:24.08:438,24,0	0/0:25,0:25:75.24:0,75,2632	0/0:23,0:23:69.24:0,69,2520	0/0:19,0:19:57.20:0,57,2140	1/1:0,17:17:51.17:913,51,0	1/1:0,24:24:72.25:1280,72,0	1/1:0,19:19:57.20:1013,57,0	0/0:30,0:30:90.31:0,90,3265	0/0:27,0:27:81.25:0,81,2733	0/0:32,0:32:96.33:0,96,3383	0/0:27,0:27:81.26:0,81,2812	1/1:0,6:6:18.06:330,18,0	1/1:0,13:13:39.13:695,39,0	1/1:0,15:15:42.14:713,42,0	1/1:0,20:20:60.21:1042,60,0	1/1:0,11:11:30.10:521,30,0	1/1:0,9:9:23.90:419,24,0	1/1:0,7:8:24.08:433,24,0	0/0:29,0:29:87.28:0,87,3134	1/1:0,16:16:48.16:863,48,0	0/0:9,0:9:27.09:0,27,969
chr10	37030416	.	TC	T	8572.76	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=16.470;DP=516;FS=2.328;HRun=1;HaplotypeScore=74.6419;InbreedingCoeff=0.9983;MQ=76.89;MQ0=0;MQRankSum=-0.450;QD=38.10;ReadPosRankSum=0.942;VQSLOD=5.5027;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:81.24:0,81,1242	1/1:0,13:13:36.08:481,36,0	0/0:15,0:15:44.29:0,44,618	0/0:14,0:14:32.48:0,32,422	0/0:26,0:26:78.24:0,78,1194	0/0:16,0:16:48.16:0,48,765	0/0:9,0:9:27.09:0,27,421	1/1:0,28:28:84.25:1129,84,0	0/0:22,0:22:66.19:0,66,998	0/0:24,0:24:72.24:0,72,1127	0/0:12,0:12:36.10:0,36,527	1/1:0,10:10:24.08:336,24,0	1/1:0,18:18:51.17:712,51,0	1/1:0,14:14:42.14:587,42,0	0/0:24,0:24:72.25:0,72,1142	0/0:18,0:18:54.17:0,54,832	0/0:25,0:25:75.23:0,75,1161	0/0:21,0:21:60.20:0,60,935	1/1:0,31:31:93.25:1234,93,0	1/1:0,20:20:60.11:790,60,0	1/1:0,17:17:42.14:587,42,0	1/1:0,6:6:18.06:245,18,0	1/1:0,13:13:33.06:439,33,0	1/1:0,12:12:30.10:419,30,0	1/1:0,20:20:57.15:775,57,0	0/0:24,0:24:72.24:0,72,1128	1/1:0,23:23:60.20:839,60,0	0/0:14,0:14:42.14:0,42,671
chr10	37030765	.	TTTAGCC	T	13928.80	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=16.454;DP=632;FS=1.830;HRun=0;HaplotypeScore=158.2902;InbreedingCoeff=0.9992;MQ=80.40;MQ0=0;MQRankSum=-18.369;QD=53.99;ReadPosRankSum=1.364;VQSLOD=5.0663;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,157,5704	1/1:3,9:12:27.09:659,27,0	0/0:20,0:20:60.21:0,60,1898	0/0:23,0:23:69.24:0,69,2236	0/0:26,0:26:78.27:0,78,2675	0/0:19,0:19:57.20:0,57,2075	0/0:31,0:31:90.31:0,90,3277	1/1:1,24:25:69.24:1647,69,0	0/0:22,0:22:63.22:0,63,2260	0/0:24,0:24:72.24:0,72,2538	0/0:19,0:19:57.20:0,57,2062	1/1:1,20:21:54.19:1329,54,0	1/1:0,22:22:60.21:1476,60,0	1/1:2,16:18:48.16:1177,48,0	0/0:20,0:20:60.17:0,60,2078	0/0:22,0:22:66.22:0,66,2336	0/0:42,0:42:99:0,126,4527	0/0:21,0:21:63.22:0,63,2285	1/1:1,18:19:39.10:859,39,0	1/1:2,19:20:48.16:1175,48,0	1/1:5,21:26:37.35:868,37,0	1/1:1,17:18:33.11:812,33,0	1/1:2,8:10:21.07:517,21,0	1/1:3,21:24:36.55:827,37,0	1/1:0,24:24:66.23:1624,66,0	0/0:19,0:19:54.19:0,54,1918	1/1:1,17:18:38.55:959,39,0	0/0:14,0:14:42.14:0,42,1539
chr10	37030934	.	A	AC	19299.33	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-5.599;DP=657;FS=4.754;HRun=2;HaplotypeScore=76.9658;InbreedingCoeff=0.9642;MQ=86.37;MQ0=0;MQRankSum=-3.457;QD=38.60;ReadPosRankSum=2.372;VQSLOD=5.5785;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,46:48:99:1900,132,0	1/1:0,8:8:24.08:345,24,0	0/0:26,0:26:66.20:0,66,801	0/0:19,0:19:41.54:0,42,488	0/0:16,0:16:48.15:0,48,595	1/1:1,21:22:57.19:821,57,0	1/1:4,16:20:48.16:687,48,0	1/1:5,26:31:72.21:999,72,0	0/0:20,0:20:60.19:0,60,744	1/1:0,16:16:48.16:691,48,0	1/1:1,13:14:42.12:584,42,0	1/1:0,32:32:93.31:1339,93,0	1/1:1,26:27:78.26:1114,78,0	1/1:0,33:33:99:1424,99,0	1/1:1,26:27:72.24:1037,72,0	0/0:20,0:20:57.18:0,57,706	0/0:33,0:33:93.24:0,93,1123	1/1:3,18:21:51.17:735,51,0	1/1:3,21:24:63.20:888,63,0	1/1:0,16:16:45.15:648,45,0	1/1:0,53:53:99:2203,154,0	1/1:1,22:23:54.18:775,54,0	1/1:1,16:17:39.13:561,39,0	1/1:2,34:36:93.31:1339,93,0	1/1:1,15:16:39.13:561,39,0	0/0:15,1:16:1.94:0,2,478	1/1:1,15:15:45.15:648,45,0	0/0:7,0:7:21.07:0,21,260
chr10	37031088	.	CT	C	11122.61	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=15.966;DP=690;FS=3.277;HRun=1;HaplotypeScore=72.6752;InbreedingCoeff=0.9997;MQ=91.27;MQ0=0;MQRankSum=-5.198;QD=37.20;ReadPosRankSum=1.446;VQSLOD=5.3961;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,132,2007	1/1:0,15:15:39.13:544,39,0	0/0:32,0:32:88.93:0,89,1397	0/0:32,0:32:76.16:0,76,1186	0/0:20,0:20:57.19:0,57,908	0/0:18,0:18:54.18:0,54,860	0/0:27,0:27:81.25:0,81,1270	1/1:1,24:25:53.20:918,53,0	0/0:20,0:20:60.19:0,60,934	0/0:24,0:24:72.25:0,72,1151	0/0:12,0:12:36.12:0,36,575	1/1:0,31:31:84.28:1171,84,0	1/1:0,18:18:54.18:754,54,0	1/1:0,32:32:87.29:1210,87,0	0/0:31,0:31:93.29:0,93,1439	0/0:18,0:18:54.17:0,54,840	0/0:34,0:34:99:0,102,1605	0/0:39,0:39:99:0,117,1870	1/1:0,17:17:51.17:705,51,0	1/1:0,20:20:48.16:666,48,0	1/1:0,37:37:99:1423,102,0	1/1:0,20:20:48.15:648,48,0	1/1:0,11:11:24.08:329,24,0	1/1:5,24:29:86.36:1092,86,0	1/1:0,21:21:60.20:828,60,0	0/0:21,0:21:63.20:0,63,985	1/1:0,23:23:60.19:836,60,0	0/0:18,0:18:54.17:0,54,839
chr10	37031284	.	AAG	A	11054.78	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=19.764;DP=682;FS=5.524;HRun=0;HaplotypeScore=166.3273;InbreedingCoeff=0.9982;MQ=67.54;MQ0=0;MQRankSum=-5.477;QD=34.98;ReadPosRankSum=-0.130;VQSLOD=6.1985;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,114,2035	1/1:1,6:7:18.06:251,18,0	0/0:15,0:15:42.93:0,43,662	0/0:11,0:11:30.10:0,30,476	0/0:28,0:28:81.26:0,81,1411	0/0:23,0:23:60.19:0,60,1052	0/0:33,0:33:99:0,99,1739	1/1:3,37:40:99:1435,105,0	0/0:17,0:17:51.16:0,51,887	0/0:22,0:22:66.22:0,66,1162	0/0:14,0:14:39.13:0,39,702	1/1:2,29:31:84.28:1173,84,0	1/1:1,26:27:75.24:1049,75,0	1/1:1,33:34:96.28:1321,96,0	0/0:33,0:33:93.32:0,93,1668	0/0:17,0:17:48.15:0,48,824	0/0:34,0:34:99:0,99,1782	0/0:33,0:33:90.31:0,90,1620	1/1:1,15:16:45.14:613,45,0	1/1:3,8:11:21.03:272,21,0	1/1:2,26:28:60.11:795,60,0	1/1:3,19:22:57.18:789,57,0	1/1:4,15:19:39.13:545,39,0	1/1:0,31:31:69.22:965,69,0	1/1:0,20:20:48.16:672,48,0	0/0:25,0:25:69.23:0,69,1197	1/1:1,29:30:84.28:1175,84,0	0/0:19,0:19:57.20:0,57,1026
chr10	37031911	.	GA	G	10455.55	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=19.647;DP=655;FS=1.995;HRun=2;HaplotypeScore=107.8974;InbreedingCoeff=0.9993;MQ=88.16;MQ0=0;MQRankSum=-3.506;QD=37.21;ReadPosRankSum=0.668;VQSLOD=4.7047;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,138,2048	1/1:0,9:9:21.07:271,21,0	0/0:25,0:25:70.06:0,70,998	0/0:22,0:22:37.37:0,37,875	0/0:14,0:14:42.13:0,42,604	0/0:15,0:15:42.14:0,42,630	0/0:45,0:45:99:0,135,1974	1/1:1,19:20:57.19:740,57,0	0/0:23,0:23:69.22:0,69,1014	0/0:24,0:24:72.23:0,72,1044	0/0:13,0:13:39.11:0,39,545	1/1:0,24:24:72.23:935,72,0	1/1:0,22:22:66.21:857,66,0	1/1:0,20:20:60.20:779,60,0	0/0:23,0:23:63.21:0,63,944	0/0:13,0:13:36.12:0,36,540	0/0:35,0:35:99:0,105,1554	0/0:27,0:27:81.23:0,81,1189	1/1:0,25:25:75.24:973,75,0	1/1:0,12:12:36.12:467,36,0	1/1:1,47:48:99:1675,129,0	1/1:0,17:17:51.17:661,51,0	1/1:0,14:14:36.12:467,36,0	1/1:0,36:36:99:1402,108,0	1/1:0,14:14:42.14:545,42,0	0/0:37,0:37:99:0,111,1639	1/1:2,18:20:54.13:682,54,0	0/0:12,0:12:36.12:0,36,539
chr10	37032999	.	AG	A	3029.44	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=18.026;DP=623;FS=1.964;HRun=2;HaplotypeScore=113.1578;InbreedingCoeff=0.9887;MQ=82.94;MQ0=0;MQRankSum=-17.466;QD=16.38;ReadPosRankSum=-1.679;VQSLOD=3.3243;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,120,1756	1/1:2,9:11:22.94:171,23,0	0/0:23,0:23:69.21:0,69,966	0/0:28,0:28:72.13:0,72,956	0/0:20,0:20:60.20:0,60,899	0/0:27,0:27:78.25:0,78,1145	0/0:27,0:27:81.25:0,81,1175	1/1:6,13:19:42.37:336,42,0	0/0:30,0:30:90.30:0,90,1345	0/0:28,0:27:81.27:0,81,1204	0/0:16,0:16:45.13:0,45,635	0/0:21,0:21:63.20:0,63,921	1/1:1,23:24:70.96:514,71,0	1/1:4,23:27:76.08:547,76,0	0/0:28,0:28:84.27:0,84,1237	0/0:29,0:29:84.28:0,84,1257	0/0:29,0:28:84.28:0,84,1259	0/0:11,0:11:33.07:0,33,469	1/1:4,10:14:18.14:237,18,0	1/1:5,14:19:28.51:282,29,0	1/1:3,15:17:15.79:174,16,0	1/1:4,20:24:65.62:481,66,0	0/0:11,0:11:30.10:0,30,448	0/0:33,0:33:99:0,99,1478	1/1:3,7:10:9.78:140,10,0	0/0:26,0:26:75.24:0,75,1087	1/1:3,16:19:48.61:366,49,0	0/0:10,0:10:30.09:0,30,429
chr10	37033002	.	AAG	A	4323.90	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=17.773;DP=610;FS=0.710;HRun=0;HaplotypeScore=119.5425;InbreedingCoeff=0.9977;MQ=82.68;MQ0=0;MQRankSum=-16.937;QD=24.16;ReadPosRankSum=-1.602;VQSLOD=4.7833;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,129,2429	1/1:1,9:10:24.04:230,24,0	0/0:24,0:24:66.23:0,66,1270	0/0:27,0:27:70.65:0,71,1205	0/0:20,0:20:60.21:0,60,1113	0/0:26,0:26:75.24:0,75,1403	0/0:25,0:25:75.26:0,75,1449	1/1:6,13:19:42.10:431,42,0	0/0:30,0:30:90.31:0,90,1739	0/0:28,0:27:81.27:0,81,1532	0/0:14,0:14:42.14:0,42,810	0/0:21,0:21:63.22:0,63,1203	1/1:2,23:25:69.03:657,69,0	1/1:3,23:26:71.89:674,72,0	0/0:27,0:27:81.28:0,81,1564	0/0:29,0:29:81.28:0,81,1540	0/0:29,0:28:87.30:0,87,1664	0/0:12,0:12:33.07:0,33,597	1/1:3,10:13:20.14:310,20,0	1/1:2,14:16:34.29:411,34,0	1/1:5,15:19:23.88:298,24,0	1/1:2,20:22:60.10:578,60,0	0/0:10,0:10:30.10:0,30,580	0/0:34,0:34:99:0,99,1866	1/1:1,7:8:21.03:203,21,0	0/0:23,0:23:69.23:0,69,1290	1/1:4,16:20:54.08:531,54,0	0/0:9,0:9:27.09:0,27,492
chr10	37033004	.	G	GA	1775.85	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=17.976;DP=614;FS=0.709;HRun=2;HaplotypeScore=116.1116;InbreedingCoeff=0.9976;MQ=82.73;MQ0=0;MQRankSum=-16.024;QD=9.76;ReadPosRankSum=-3.201;VQSLOD=0.3582;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,126,1535	1/1:10,0:10:23.65:101,24,0	0/0:26,0:26:72.12:0,72,856	0/0:27,0:27:52.96:0,53,745	0/0:20,0:20:54.17:0,54,663	0/0:25,0:25:69.22:0,69,855	0/0:25,0:25:75.24:0,75,929	1/1:16,2:18:44.45:289,44,0	0/0:31,0:31:93.28:0,93,1139	0/0:26,0:25:78.25:0,78,967	0/0:14,0:14:42.13:0,42,520	0/0:21,0:21:63.20:0,63,781	1/1:24,3:27:58.33:257,58,0	1/1:28,0:28:56.44:282,56,0	0/0:28,0:28:81.21:0,81,986	0/0:28,0:28:72.21:0,72,877	0/0:31,0:30:84.26:0,84,1040	0/0:11,0:11:30.05:0,30,355	1/1:13,1:14:31.57:189,32,0	1/1:15,1:16:37.94:173,38,0	1/1:18,3:20:32.44:172,32,0	1/1:21,0:22:52.31:216,52,0	0/0:10,0:10:30.09:0,30,372	0/0:33,0:33:93.23:0,93,1122	1/1:7,0:7:18.21:69,18,0	0/0:24,0:24:57.18:0,57,707	1/1:16,3:19:47.49:250,47,0	0/0:9,0:9:21.07:0,21,260
chr10	37033783	.	CTT	C	2532.91	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=11.254;DP=339;FS=2.710;HRun=6;HaplotypeScore=86.9828;InbreedingCoeff=0.9020;MQ=64.35;MQ0=10;MQRankSum=-1.893;QD=13.06;ReadPosRankSum=2.009;VQSLOD=0.0323;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:21:39.88:229,40,0	1/1:8,1:9:20.99:185,21,0	0/0:12,0:7:10.12:0,10,68	0/0:7,0:5:6.62:0,7,78	0/0:24,0:24:69.24:0,69,1230	1/1:18,1:19:40.57:276,41,0	1/1:10,0:10:28.49:168,28,0	1/1:12,0:9:14.20:70,14,0	0/0:11,0:10:30.10:0,30,538	1/1:12,0:11:22.39:181,22,0	1/1:24,0:24:31.40:311,31,0	0/0:6,0:5:11.48:0,11,62	1/1:10,1:11:22.61:180,23,0	1/1:5,0:5:8.60:62,9,0	1/1:7,0:7:13.47:96,13,0	0/0:13,0:13:39.10:0,39,669	0/0:23,0:23:69.24:0,69,1225	1/1:10,0:9:16.01:146,16,0	1/1:7,0:5:9.73:70,10,0	1/1:9,0:9:13.96:98,14,0	1/1:9,0:8:23.99:214,24,0	1/1:3,0:3:8.28:49,8,0	0/0:8,0:8:12.42:0,12,88	0/0:3,0:3:3.16:0,3,20	1/1:16,1:17:44.33:333,44,0	0/0:22,0:22:60.21:0,60,1078	1/1:7,0:7:10.76:83,11,0	0/0:15,0:14:36.12:0,36,643
chr10	37033787	.	T	TA	4670.49	PASS	AB=1.000;AC=35;AF=0.625;AN=56;BaseQRankSum=10.869;DP=324;FS=0.925;HRun=0;HaplotypeScore=76.8274;InbreedingCoeff=0.8585;MQ=69.49;MQ0=0;MQRankSum=-3.467;QD=24.33;ReadPosRankSum=2.759;VQSLOD=6.2263;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,19:21:42.12:493,42,0	1/1:1,9:10:21.06:248,21,0	0/1:14,0:9:10.66:11,0,100	0/0:8,0:6:16.17:0,16,100	0/0:25,0:25:72.22:0,72,970	1/1:1,15:16:42.13:495,42,0	1/1:0,10:10:30.09:353,30,0	1/1:0,5:5:15.04:176,15,0	0/0:11,0:11:33.10:0,33,439	1/1:1,9:10:12.68:268,13,0	1/1:6,18:24:34.52:567,35,0	0/0:5,0:5:11.83:0,12,82	1/1:3,8:11:21.27:270,21,0	1/1:0,2:3:9.02:98,9,0	1/1:2,6:8:18.03:195,18,0	0/0:13,0:13:39.09:0,39,523	0/0:23,0:23:69.23:0,69,956	1/1:2,7:9:16.84:222,17,0	1/1:1,4:4:8.14:104,8,0	1/1:1,6:8:16.27:191,16,0	1/1:1,7:9:18.87:240,19,0	1/1:0,3:3:9.03:103,9,0	0/0:8,0:8:17.83:0,18,147	0/0:4,0:4:6:0,6,52	1/1:2,14:17:38.41:490,38,0	0/0:21,0:20:60.20:0,60,839	1/1:2,7:7:8.54:146,9,0	0/0:14,0:14:36.12:0,36,502
chr10	37033788	.	T	TAAA	3082.10	PASS	AB=1.000;AC=41;AF=0.732;AN=56;BaseQRankSum=13.539;DP=329;FS=2.031;HRun=0;HaplotypeScore=94.0437;InbreedingCoeff=0.8229;MQ=70.79;MQ0=0;MQRankSum=-3.725;QD=14.40;ReadPosRankSum=1.374;VQSLOD=3.4891;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:21:38.37:209,38,0	1/1:10,0:10:20.93:164,21,0	0/1:14,0:9:9.89:10,0,113	0/0:9,0:7:4.47:0,4,113	0/0:25,0:25:72.23:0,72,1287	1/1:17,0:17:40.44:237,40,0	1/1:10,0:10:28.49:153,28,0	1/1:6,0:6:14.51:80,15,0	0/0:11,0:11:33.11:0,33,592	1/1:11,0:11:24.58:155,25,0	1/1:24,0:24:34.13:298,34,0	1/1:1,3:5:12.04:246,12,0	1/1:11,0:11:24.18:174,24,0	1/1:3,0:3:8.84:74,9,0	1/1:8,0:8:20.43:133,20,0	0/0:13,0:13:39.13:0,39,725	0/0:23,0:23:69.22:0,69,1222	1/1:9,0:9:26.58:178,27,0	1/1:5,0:4:9.37:67,9,0	1/1:8,0:8:20.54:136,21,0	1/1:9,0:9:19.59:160,20,0	1/1:4,0:4:8.67:53,9,0	1/1:4,4:8:13.25:262,13,0	1/1:1,4:5:6.02:122,6,0	1/1:17,0:17:21.23:279,21,0	0/0:21,0:20:60.20:0,60,1081	1/1:9,0:7:9.82:90,10,0	0/0:13,0:13:36.11:0,36,640
chr10	37034588	.	TCTTTTA	T	6814.87	PASS	AC=24;AF=0.444;AN=54;BaseQRankSum=14.593;DP=442;FS=4.582;HRun=0;HaplotypeScore=166.8400;InbreedingCoeff=0.9673;MQ=58.30;MQ0=2;MQRankSum=-13.786;QD=63.69;ReadPosRankSum=2.549;VQSLOD=5.3708;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,123,4258	1/1:0,9:9:24.08:605,24,0	0/0:14,0:9:12.09:0,12,539	0/0:12,0:12:23.83:0,24,512	0/0:19,0:19:54.18:0,54,1953	0/0:25,0:24:75.26:0,75,2712	0/0:29,0:29:87.28:0,87,2989	1/1:0,6:6:15.05:379,15,0	0/0:20,0:20:60.21:0,60,2207	0/0:23,0:23:69.22:0,69,2332	0/0:15,0:15:45.15:0,45,1622	1/1:0,6:6:18.06:453,18,0	1/1:0,4:4:9.03:226,9,0	1/1:0,16:16:45.15:1106,45,0	0/0:21,0:21:63.20:0,63,2165	0/0:21,0:21:63.20:0,63,2167	0/0:37,0:37:99:0,111,3770	0/0:17,0:17:51.18:0,51,1775	1/1:1,4:5:15.03:300,15,0	1/1:0,12:12:30.10:754,30,0	./.	1/1:0,9:9:21.07:520,21,0	1/1:0,4:4:12.04:249,12,0	1/1:0,7:7:9.03:225,9,0	1/1:0,11:11:27.09:679,27,0	0/0:28,0:28:84.29:0,84,3123	1/1:1,17:18:54.19:1317,54,0	0/0:10,0:10:30.10:0,30,1077
chr10	37034598	.	GAGTACAC	G	7227.96	PASS	AC=24;AF=0.444;AN=54;BaseQRankSum=14.608;DP=469;FS=2.579;HRun=0;HaplotypeScore=179.0086;InbreedingCoeff=0.9621;MQ=54.18;MQ0=2;MQRankSum=-13.917;QD=68.19;ReadPosRankSum=3.350;VQSLOD=5.2505;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,129,5102	1/1:0,9:9:24.08:660,24,0	0/0:18,0:10:30.10:0,30,1179	0/0:19,0:12:26.74:0,27,939	0/0:21,0:21:57.17:0,57,2114	0/0:24,0:23:72.23:0,72,2809	0/0:29,0:29:87.28:0,87,3287	1/1:0,6:6:15.05:414,15,0	0/0:23,0:23:69.24:0,69,2801	0/0:23,0:23:69.23:0,69,2629	0/0:16,0:16:48.16:0,48,1992	1/1:0,6:6:18.06:494,18,0	1/1:0,4:4:9.03:247,9,0	1/1:0,16:16:42.62:1153,43,0	0/0:23,0:23:69.24:0,69,2894	0/0:19,0:19:57.20:0,57,2282	0/0:37,0:36:99:0,108,4196	0/0:18,0:18:51.17:0,51,2133	1/1:0,4:4:12.04:326,12,0	1/1:0,12:12:30.10:824,30,0	./.	1/1:0,9:9:21.07:572,21,0	1/1:0,4:4:7.27:167,7,0	1/1:0,7:7:9.03:245,9,0	1/1:0,11:11:27.09:741,27,0	0/0:34,0:34:99:0,102,3833	1/1:1,17:18:51.65:1384,52,0	0/0:14,0:14:42.14:0,42,1659
chr10	37034719	.	C	CT	2327.02	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=12.476;DP=415;FS=41.895;HRun=1;HaplotypeScore=65.5580;InbreedingCoeff=0.9172;MQ=53.27;MQ0=8;MQRankSum=-11.597;QD=21.15;ReadPosRankSum=-1.062;VQSLOD=1.1995;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:99:0,99,1263	1/1:0,3:3:6.02:80,6,0	0/0:19,0:9:20.71:0,21,229	0/0:19,0:14:32.30:0,32,388	0/0:15,0:15:45.13:0,45,570	0/0:15,0:13:39.06:0,39,485	0/0:25,0:25:75.24:0,75,973	1/1:8,12:15:38.98:454,39,0	0/0:20,0:20:51.17:0,51,662	0/0:30,0:30:84.25:0,84,1054	0/0:11,0:11:30.06:0,30,358	1/1:1,5:6:6.02:86,6,0	1/1:0,8:8:24.08:330,24,0	1/1:0,8:7:12.04:167,12,0	0/0:18,0:18:54.17:0,54,687	0/0:18,0:18:54.18:0,54,701	0/0:36,0:36:99:0,105,1344	0/0:20,0:19:57.15:0,57,722	1/1:0,3:3:9.03:121,9,0	1/1:1,9:10:18.06:252,18,0	1/1:1,12:13:23.82:206,24,0	1/1:1,5:4:9.03:129,9,0	1/1:2,4:5:3.01:43,3,0	1/1:0,6:5:11.92:103,12,0	1/1:2,9:11:27.09:371,27,0	0/0:16,0:16:48.16:0,48,623	1/1:0,10:8:15.05:205,15,0	0/0:10,0:10:23.99:0,24,274
chr10	37035082	.	CT	C	9483.26	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=0.893;DP=718;FS=2.470;HRun=2;HaplotypeScore=92.3117;InbreedingCoeff=0.9759;MQ=77.04;MQ0=0;MQRankSum=-3.186;QD=31.51;ReadPosRankSum=2.602;VQSLOD=4.7361;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,160,2330	1/1:0,4:4:3.01:37,3,0	0/0:17,0:17:45.12:0,45,582	0/0:17,0:17:47.49:0,47,599	0/0:22,0:22:63.16:0,63,897	0/0:24,0:24:72.22:0,72,1035	0/0:28,0:28:84.28:0,84,1256	1/1:0,24:24:72.11:853,72,0	0/0:24,0:24:72.19:0,72,1052	0/0:22,0:22:66.22:0,66,974	0/0:16,0:16:48.11:0,48,674	1/1:0,32:32:78.09:1009,78,0	1/1:0,35:35:90.29:1167,90,0	1/1:0,38:38:99:1282,99,0	0/0:36,0:36:99:0,108,1521	0/0:29,0:29:87.26:0,87,1246	0/0:43,0:43:99:0,123,1773	0/0:26,0:26:78.22:0,78,1142	1/1:0,15:15:45.14:570,45,0	1/1:0,21:21:42.14:543,42,0	1/1:0,41:41:99:1284,99,0	1/1:0,18:18:42.14:542,42,0	1/1:2,13:15:27.49:329,27,0	1/1:0,24:24:63.20:817,63,0	1/1:1,11:12:36.05:444,36,0	0/0:36,0:36:99:0,105,1516	1/1:1,21:22:48.12:604,48,0	0/0:23,0:23:69.23:0,69,1032
chr10	37035250	.	TA	T	9969.28	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=14.789;DP=684;FS=12.616;HRun=3;HaplotypeScore=83.5837;InbreedingCoeff=0.9998;MQ=77.16;MQ0=0;MQRankSum=-3.884;QD=33.91;ReadPosRankSum=0.193;VQSLOD=4.1220;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,114,1879	1/1:0,10:10:27.08:334,27,0	0/0:25,0:26:65.42:0,65,854	0/0:28,1:26:33.91:0,34,839	0/0:21,0:21:63.20:0,63,888	0/0:31,0:31:78.26:0,78,1121	0/0:22,0:22:63.19:0,63,866	1/1:0,29:29:87.24:1049,87,0	0/0:20,0:20:60.20:0,60,859	0/0:18,0:18:48.16:0,48,691	0/0:21,0:21:63.20:0,63,887	1/1:1,30:31:84.26:1037,84,0	1/1:0,19:19:48.15:595,48,0	1/1:0,24:24:63.20:780,63,0	0/0:23,0:23:69.23:0,69,993	0/0:23,0:23:69.18:0,69,923	0/0:43,0:43:99:0,129,1839	0/0:21,0:21:40.23:0,40,777	1/1:0,22:22:66.17:773,66,0	1/1:0,22:22:60.16:727,60,0	1/1:0,27:27:75.24:930,75,0	1/1:0,17:17:51.16:632,51,0	1/1:0,21:21:54.06:648,54,0	1/1:4,23:27:78.16:921,78,0	1/1:0,21:21:57.18:707,57,0	0/0:29,0:29:78.26:0,78,1106	1/1:0,24:24:69.18:838,69,0	0/0:13,0:13:39.13:0,39,561
chr10	37035392	.	T	TACACACACACACAC	10521.16	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=0.539;DP=501;FS=21.282;HRun=0;HaplotypeScore=205.5364;InbreedingCoeff=0.8485;MQ=59.41;MQ0=16;MQRankSum=-9.900;QD=48.26;ReadPosRankSum=-2.455;VQSLOD=2.2680;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:31:39.49:0,39,2232	1/1:10,0:11:23.95:887,24,0	0/0:27,0:18:45.15:0,45,1556	0/0:31,0:20:51.17:0,51,1746	0/0:12,0:12:33.10:0,33,1266	0/0:17,0:18:0.08:0,0,1458	0/0:20,0:20:48.62:0,49,1691	1/1:42,0:36:79.23:3160,79,0	0/0:23,0:23:66.21:0,66,2515	0/0:10,0:10:30.10:0,30,1118	0/0:6,0:6:12.04:0,12,474	1/1:15,0:14:18.05:628,18,0	1/1:6,4:9:9.92:311,10,0	1/1:7,0:10:2.63:124,3,0	0/0:17,0:17:45.15:0,45,1723	0/0:14,0:14:3.13:0,3,862	0/0:22,0:23:49.05:0,49,1892	0/0:15,0:15:21.47:0,21,1157	1/1:7,5:11:30.10:1292,30,0	1/1:16,0:15:17.68:772,18,0	1/1:17,0:15:11.77:380,12,0	1/1:22,0:24:7.88:292,8,0	1/1:12,1:14:25.75:1077,26,0	1/1:8,1:12:1.78:121,2,0	1/1:10,0:9:8.90:271,9,0	0/0:24,0:24:50.07:0,50,2177	1/1:17,0:15:33.11:1207,33,0	0/0:9,0:7:18.06:0,18,678
chr10	37035632	.	AC	A	12670.95	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=20.226;DP=724;FS=5.496;HRun=1;HaplotypeScore=114.6549;InbreedingCoeff=0.9999;MQ=93.20;MQ0=2;MQRankSum=-5.538;QD=37.49;ReadPosRankSum=1.585;VQSLOD=4.5753;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,144,2217	1/1:0,14:14:42.09:562,42,0	0/0:31,0:31:53.10:0,53,1149	0/0:34,0:33:81.56:0,82,1228	0/0:28,0:28:84.27:0,84,1318	0/0:20,0:20:60.20:0,60,958	0/0:31,0:31:93.32:0,93,1480	1/1:0,27:27:81.27:1132,81,0	0/0:23,0:23:69.21:0,69,1075	0/0:17,0:17:51.17:0,51,792	0/0:10,0:10:30.09:0,30,456	1/1:0,31:30:81.27:1131,81,0	1/1:0,21:21:57.19:793,57,0	1/1:0,18:18:48.16:670,48,0	0/0:39,0:39:99:0,117,1844	0/0:26,0:26:75.26:0,75,1198	0/0:21,0:21:63.09:0,63,919	0/0:21,0:21:60.20:0,60,950	1/1:0,35:35:99:1436,105,0	1/1:0,18:18:48.16:671,48,0	1/1:0,44:44:99:1593,114,0	1/1:0,25:25:63.13:854,63,0	1/1:0,27:27:72.16:963,72,0	1/1:0,29:29:81.20:1107,81,0	1/1:0,16:15:45.15:628,45,0	0/0:23,0:23:69.22:0,69,1078	1/1:0,33:33:81.27:1131,81,0	0/0:13,0:13:39.13:0,39,623
chr10	37036049	.	GTT	G	10180.90	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=17.679;DP=745;FS=14.945;HRun=8;HaplotypeScore=126.1708;InbreedingCoeff=0.9955;MQ=81.75;MQ0=1;MQRankSum=-4.454;QD=30.39;ReadPosRankSum=2.965;VQSLOD=3.6548;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,120,2030	1/1:0,4:4:12.04:146,12,0	0/0:35,0:35:70.32:0,70,1007	0/0:23,0:23:53.37:0,53,782	0/0:30,0:30:87.30:0,87,1471	0/0:24,0:24:69.22:0,69,1137	0/0:30,0:30:84.27:0,84,1384	1/1:5,32:37:96.28:1161,96,0	0/0:32,0:33:86.78:0,87,1428	0/0:34,0:34:87.30:0,87,1471	0/0:10,0:10:24.08:0,24,406	1/1:3,24:27:66.20:805,66,0	1/1:1,29:30:81.25:988,81,0	1/1:0,26:26:69.22:841,69,0	0/0:32,0:32:96.33:0,96,1621	0/0:25,0:25:75.26:0,75,1267	0/0:31,0:30:81.28:0,81,1370	0/0:16,0:16:45.15:0,45,761	1/1:4,17:21:51.11:605,51,0	1/1:1,20:21:57.18:695,57,0	1/1:3,37:39:90.27:1098,90,0	1/1:0,19:19:48.15:585,48,0	1/1:2,14:16:36.10:439,36,0	1/1:2,46:48:99:1317,108,0	1/1:1,21:22:57.17:695,57,0	0/0:26,0:26:75.26:0,75,1268	1/1:0,24:24:66.21:805,66,0	0/0:16,0:16:42.14:0,42,710
chr10	37036360	.	TTACTGCA	T	10330.17	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=16.511;DP=594;FS=8.499;HRun=0;HaplotypeScore=151.0085;InbreedingCoeff=0.9897;MQ=80.57;MQ0=0;MQRankSum=-15.507;QD=51.65;ReadPosRankSum=-0.781;VQSLOD=4.0630;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,132,5052	1/1:0,5:5:15.05:395,15,0	0/0:22,0:22:45.14:0,45,1671	0/0:15,0:15:36.12:0,36,1339	0/0:27,0:27:78.27:0,78,3103	0/0:23,0:23:66.19:0,66,2542	0/0:45,0:45:99:0,132,5080	1/1:2,15:17:45.14:1070,45,0	0/0:23,0:23:69.24:0,69,2767	0/0:45,0:45:99:0,132,5119	0/0:15,0:15:42.14:0,42,1568	1/1:2,16:18:36.12:945,36,0	1/1:0,15:15:33.11:869,33,0	1/1:1,26:27:69.20:1756,69,0	0/0:24,0:24:63.22:0,63,2419	0/0:16,0:16:48.16:0,48,1926	0/0:34,0:34:96.27:0,96,3447	0/0:31,0:31:93.32:0,93,3684	1/1:5,15:20:39.12:925,39,0	1/1:2,15:17:45.02:1008,45,0	1/1:3,20:23:36.12:915,36,0	1/1:2,11:13:26.81:533,27,0	1/1:0,11:11:24:511,24,0	1/1:4,15:19:21.07:518,21,0	1/1:0,8:8:15.05:391,15,0	0/0:25,0:25:75.25:0,75,2897	1/1:1,6:7:21.03:494,21,0	0/0:4,0:4:12.01:0,12,385
chr10	37036643	.	AGGCCT	A	10503.33	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=13.686;DP=519;FS=11.989;HRun=0;HaplotypeScore=104.2471;InbreedingCoeff=0.9937;MQ=84.18;MQ0=0;MQRankSum=-9.413;QD=49.08;ReadPosRankSum=3.025;VQSLOD=4.8923;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:93.32:0,93,2933	1/1:0,10:10:24.08:520,24,0	0/0:16,0:16:48.08:0,48,1246	0/0:23,0:23:63.20:0,63,1732	0/0:16,0:16:48.16:0,48,1499	0/0:21,0:21:63.21:0,63,1921	0/0:16,0:16:42.10:0,42,1122	1/1:1,24:25:72.25:1481,72,0	0/0:17,0:17:51.16:0,51,1527	0/0:30,0:30:90.29:0,90,2640	0/0:8,0:8:24.08:0,24,760	1/1:1,20:21:54.19:1170,54,0	1/1:0,18:18:39.13:819,39,0	1/1:0,16:16:45.15:976,45,0	0/0:23,0:23:66.20:0,66,1955	0/0:18,0:18:54.19:0,54,1649	0/0:41,0:41:99:0,117,3712	0/0:16,0:16:45.14:0,45,1303	1/1:1,15:16:42.12:851,42,0	1/1:0,10:10:27.09:586,27,0	1/1:1,15:16:21.07:456,21,0	1/1:0,12:12:21.07:455,21,0	1/1:0,13:13:27.09:586,27,0	1/1:0,27:27:51.16:1108,51,0	1/1:0,11:11:30.10:651,30,0	0/0:24,0:24:72.25:0,72,2214	1/1:1,18:19:42.06:844,42,0	0/0:4,0:4:12.04:0,12,356
chr10	37037339	.	T	TCACACAC	1437.49	PASS	AB=0.720;AC=22;AF=0.393;AN=56;BaseQRankSum=11.212;DP=683;FS=33.882;HRun=0;HaplotypeScore=177.1311;InbreedingCoeff=-0.5102;MQ=54.38;MQ0=8;MQRankSum=0.844;QD=2.86;ReadPosRankSum=5.310;VQSLOD=1.1077;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:20,0:39:49.33:49,0,467	0/1:7,1:13:35.94:36,0,73	0/0:42,0:8:18.05:0,18,233	0/0:38,0:11:27.08:0,27,355	0/0:9,0:22:29.95:0,30,327	0/1:8,0:21:78.73:79,0,111	0/1:19,0:41:14.81:15,0,749	0/1:22,0:22:47.84:48,0,430	0/0:6,0:14:26.99:0,27,313	0/1:11,0:23:99:192,0,389	0/1:10,0:20:4.95:5,0,273	0/1:10,0:26:32.47:32,0,405	0/1:5,0:17:99:200,0,105	0/1:17,0:18:95.56:96,0,142	0/1:9,0:19:53.22:53,0,271	0/1:4,0:22:90.99:91,0,114	0/0:7,0:28:45.45:0,45,545	0/1:10,0:28:11.93:12,0,336	0/1:18,0:16:64.54:65,0,362	0/1:15,0:15:12.94:13,0,109	0/1:27,0:26:78.05:78,0,222	0/0:10,2:17:13.59:0,14,167	0/1:8,0:20:7.92:8,0,241	0/1:22,0:62:99:215,0,690	0/0:8,0:20:16.60:0,17,209	0/1:15,0:26:86.76:87,0,472	0/1:5,0:18:99:208,0,119	1/1:1,0:4:2.90:16,3,0
chr10	37038989	.	CGT	C	3435.80	PASS	AB=0.737;AC=20;AF=0.370;AN=54;BaseQRankSum=6.776;DP=778;FS=12.296;HRun=0;HaplotypeScore=140.0039;InbreedingCoeff=0.6676;MQ=59.37;MQ0=21;MQRankSum=-0.956;QD=14.62;ReadPosRankSum=0.103;VQSLOD=2.7454;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:41:76.95:0,77,1289	./.	0/0:63,0:20:26.28:0,26,220	0/0:72,0:22:5:0,5,351	0/0:17,2:19:4.60:0,5,587	0/0:31,1:32:37.77:0,38,1142	0/0:33,0:33:81.28:0,81,1308	1/1:19,7:26:51.13:610,51,0	0/0:34,0:34:87.28:0,87,1393	0/0:33,0:34:87.24:0,87,1324	0/0:26,1:27:40.74:0,41,1178	1/1:13,19:32:75.24:928,75,0	1/1:7,10:17:0.32:14,0,0	0/1:9,7:16:26.91:27,0,31	0/0:25,0:25:69.07:0,69,1089	0/0:24,0:24:70.45:0,70,1075	0/0:45,1:47:65.69:0,66,1699	0/0:26,0:26:60.10:0,60,892	1/1:14,7:21:21.82:264,22,0	1/1:6,12:18:0.81:7,1,0	1/1:14,14:22:3:35,3,0	0/0:20,0:20:4.17:0,4,18	1/1:6,12:18:30.09:374,30,0	1/1:7,27:33:87.28:1084,87,0	1/1:6,12:18:8.32:64,8,0	0/0:5,0:25:61.34:0,61,592	0/1:5,2:7:19.33:28,0,19	0/0:1,0:12:24.02:0,24,234
chr10	37038991	.	T	TGTGTGTGTGTGC	5492.57	PASS	AB=0.956;AC=20;AF=0.370;AN=54;BaseQRankSum=2.828;DP=791;FS=0.461;HRun=0;HaplotypeScore=268.6690;InbreedingCoeff=0.4266;MQ=57.35;MQ0=21;MQRankSum=-7.060;QD=15.05;ReadPosRankSum=-2.994;VQSLOD=3.1904;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:41:80.90:0,81,2532	./.	0/0:65,0:20:28.78:0,29,378	0/1:71,0:22:2.92:3,0,515	0/0:18,0:18:42.14:0,42,1104	0/0:34,0:34:81.26:0,81,2622	0/0:32,0:32:81.28:0,81,2471	1/1:36,0:36:75.22:1699,75,0	0/0:33,0:33:87.75:0,88,2832	0/0:34,0:34:87.25:0,87,2259	0/0:27,0:27:78.27:0,78,2572	0/1:32,0:32:99:190,0,1170	0/1:17,0:17:6.61:522,0,7	1/1:15,0:15:18.06:882,18,0	0/0:24,0:24:69.24:0,69,1977	0/0:27,0:27:77.02:0,77,2090	0/0:45,0:45:99:0,117,3651	0/1:25,0:25:12.26:12,0,1713	1/1:21,0:21:38.33:742,38,0	1/1:17,0:17:5.65:357,6,0	0/1:33,0:26:99:152,0,175	0/1:9,11:20:6.48:172,0,6	0/1:18,0:18:6.45:6,0,606	0/1:34,0:33:0.32:0,0,1687	1/1:19,0:19:9.03:374,9,0	0/0:25,0:25:61.42:0,61,929	1/1:6,0:5:8.94:381,9,0	0/0:12,0:12:24.08:0,24,428
chr10	37039001	.	T	TGC	1082.60	PASS	AB=0.930;AC=17;AF=0.315;AN=54;BaseQRankSum=8.426;DP=766;FS=4.642;HRun=0;HaplotypeScore=151.6541;InbreedingCoeff=0.3201;MQ=55.14;MQ0=20;MQRankSum=-3.134;QD=4.88;ReadPosRankSum=-0.762;VQSLOD=2.9341;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:40:70.28:0,70,1214	./.	0/0:62,0:19:46.25:0,46,487	0/0:74,0:24:28.31:0,28,566	0/0:19,0:19:51:0,51,680	0/0:32,0:32:84.13:0,84,1189	0/0:30,0:30:84.27:0,84,1246	0/1:32,0:32:99:189,0,143	0/0:33,0:33:93.24:0,93,1347	0/0:33,0:33:77.90:0,78,1289	0/0:27,0:27:81.10:0,81,1175	0/1:30,0:30:25.58:26,0,278	0/1:11,3:14:15.81:87,0,16	1/1:8,5:13:17.35:150,17,0	0/0:27,0:27:72.23:0,72,1073	0/0:30,0:30:85.73:0,86,1134	0/0:48,0:48:99:0,132,1813	0/0:26,0:26:63.02:0,63,879	0/1:14,2:16:42.88:125,0,43	1/1:12,3:15:5.99:51,6,0	1/1:23,6:22:3.23:16,3,0	0/1:9,3:12:6.34:25,0,6	0/0:15,0:15:13.60:0,14,154	0/0:39,0:38:38.98:0,39,466	1/1:13,3:16:4.50:41,4,0	0/1:26,0:26:86.58:318,0,87	1/1:2,3:4:8.82:64,9,0	0/1:14,0:14:56.42:161,0,56
chr10	37039003	.	T	TGTGTGTGTGC	2557.18	PASS	AB=0.860;AC=16;AF=0.286;AN=56;BaseQRankSum=8.043;DP=758;FS=0.491;HRun=0;HaplotypeScore=241.6207;InbreedingCoeff=0.6622;MQ=55.23;MQ0=19;MQRankSum=-6.736;QD=16.93;ReadPosRankSum=-2.992;VQSLOD=2.3373;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:37:81.20:0,81,2425	0/1:6,0:6:0:0,0,0	0/0:60,0:19:40.47:0,40,611	0/0:73,0:24:31.41:0,31,543	0/0:19,0:19:51.03:0,51,1136	0/0:31,0:31:84.24:0,84,2568	0/0:32,0:32:87.14:0,87,2422	1/1:30,0:30:47.74:322,48,0	0/0:33,0:33:89.62:0,90,2678	0/0:33,0:33:95.34:0,95,2228	0/0:27,0:27:81.20:0,81,2433	0/0:31,0:31:12.45:0,12,1428	1/1:11,3:14:9.92:414,10,0	1/1:7,5:13:17.93:716,18,0	0/0:28,0:28:74.91:0,75,1976	0/0:32,0:32:84.14:0,84,2079	0/0:49,0:49:99:0,144,3685	0/0:24,0:24:52.68:0,53,1666	0/1:14,2:16:6.96:374,0,7	1/1:12,3:15:5.80:252,6,0	0/1:22,6:20:9.57:10,0,24	0/1:5,3:8:7.27:130,0,7	0/0:15,0:15:20.33:0,20,713	0/0:40,0:39:91.56:0,92,2186	1/1:13,3:16:8.75:247,9,0	0/0:28,0:28:46.45:0,46,925	1/1:2,3:4:2.39:268,2,0	0/0:14,0:14:17.24:0,17,403
chr10	37039054	.	CATGT	C	62.52	PASS	AB=0.632;AC=7;AF=0.152;AN=46;BaseQRankSum=5.282;DP=603;FS=8.848;HRun=0;HaplotypeScore=187.0180;InbreedingCoeff=0.7396;MQ=54.88;MQ0=5;MQRankSum=-3.597;QD=2.23;ReadPosRankSum=-1.961;VQSLOD=1.6036;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:87.14:0,87,2248	./.	0/0:33,0:16:37.22:0,37,701	0/0:33,0:19:45.16:0,45,1004	0/0:24,0:24:60.21:0,60,1707	0/0:28,0:28:72.22:0,72,1960	0/0:35,0:35:59.47:0,59,1320	./.	0/0:44,0:44:99:0,129,3376	0/0:29,0:29:79.27:0,79,2128	0/0:13,0:13:39.11:0,39,988	0/0:36,0:36:99:0,102,2707	1/1:1,4:5:3.01:32,3,0	1/1:0,5:5:1.55:4,2,0	0/0:24,0:24:58.67:0,59,1618	0/0:26,0:26:78.25:0,78,2169	0/0:47,0:47:99:0,129,3561	0/0:29,0:28:71.27:0,71,1774	./.	0/0:1,4:5:2.74:0,3,12	0/1:5,7:12:0.22:0,0,0	./.	0/0:18,0:18:42.14:0,42,1197	0/0:41,0:40:99:0,108,3034	./.	0/0:32,0:32:96.33:0,96,2662	1/1:0,6:6:11.97:130,12,0	0/0:25,0:24:69.24:0,69,1974
chr10	37039060	.	CATCT	C	107.62	PASS	AB=0.600;AC=7;AF=0.152;AN=46;BaseQRankSum=5.337;DP=581;FS=20.613;HRun=0;HaplotypeScore=183.4913;InbreedingCoeff=0.7772;MQ=56.31;MQ0=5;MQRankSum=-3.307;QD=3.84;ReadPosRankSum=-0.641;VQSLOD=1.4300;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:81.05:0,81,1649	./.	0/0:33,0:16:33.71:0,34,668	0/0:31,0:18:49.42:0,49,863	0/0:25,0:25:60.20:0,60,1391	0/0:29,0:29:74.67:0,75,1575	0/0:32,0:32:47.05:0,47,906	./.	0/0:37,0:37:99:0,108,2709	0/0:29,0:28:72.60:0,73,1788	0/0:10,0:10:27.08:0,27,488	0/0:35,0:34:61.35:0,61,223	1/1:1,4:5:6.01:68,6,0	1/1:0,5:5:2.84:14,3,0	0/0:19,0:19:43.62:0,44,1235	0/0:27,0:27:78.25:0,78,2001	0/0:46,0:46:99:0,126,3209	0/0:26,0:25:47.77:0,48,1258	./.	0/0:1,3:5:2.74:0,3,12	0/1:4,7:12:0.22:0,0,0	./.	0/0:19,0:19:23.97:0,24,93	0/0:41,0:41:51.50:0,52,204	./.	0/0:32,0:32:96.33:0,96,2406	1/1:0,6:6:12.03:137,12,0	0/0:25,0:24:69.24:0,69,1747
chr10	37039063	.	CTG	C	812.53	PASS	AB=0.973;AC=12;AF=0.231;AN=52;BaseQRankSum=5.735;DP=599;FS=14.133;HRun=0;HaplotypeScore=150.8332;InbreedingCoeff=0.4951;MQ=56.08;MQ0=5;MQRankSum=1.620;QD=4.89;ReadPosRankSum=2.177;VQSLOD=2.4333;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:54.82:0,55,464	./.	0/0:31,0:14:28.67:0,29,382	0/0:29,0:16:24.55:0,25,359	0/1:27,1:28:24.22:24,0,596	0/0:29,0:29:50.79:0,51,419	0/0:34,0:34:36.25:0,36,298	0/0:2,0:2:5.87:0,6,36	0/0:39,1:40:51.05:0,51,1207	0/0:31,0:30:62.75:0,63,525	0/0:9,0:9:9:0,9,78	1/1:35,0:34:70.66:365,71,0	0/1:5,0:5:4.28:4,0,9	0/1:7,0:7:0.58:1,0,26	0/0:20,0:20:43.62:0,44,430	0/0:26,0:26:63.21:0,63,1012	0/0:44,1:47:61.02:0,61,1584	0/0:24,0:23:42.31:0,42,366	0/0:1,0:1:2.97:0,3,20	0/0:5,0:5:2.90:0,3,16	0/0:16,0:15:2.89:0,3,17	0/0:4,0:6:2.96:0,3,19	1/1:20,0:20:31.45:165,31,0	1/1:40,0:40:68.86:362,69,0	./.	0/0:31,1:32:33.04:0,33,996	1/1:6,0:6:9.51:34,10,0	0/1:23,2:24:15.21:15,0,689
chr10	37039079	.	GT	G	3501.80	PASS	AB=1.000;AC=25;AF=0.446;AN=56;BaseQRankSum=6.201;DP=666;FS=27.262;HRun=1;HaplotypeScore=137.8819;InbreedingCoeff=0.8601;MQ=61.23;MQ0=5;MQRankSum=3.045;QD=14.53;ReadPosRankSum=-1.550;VQSLOD=1.5782;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:51.78:0,52,495	1/1:6,0:6:3:28,3,0	0/0:33,1:25:66.45:0,66,960	0/0:30,0:21:57.83:0,58,789	0/0:22,1:23:52.42:0,52,787	0/0:31,0:31:55.07:0,55,500	0/0:36,0:36:31.77:0,32,244	1/1:15,0:15:30.38:279,30,0	0/0:36,0:36:99:0,104,1542	0/1:35,0:34:3.47:3,0,672	0/0:10,0:10:15.13:0,15,107	1/1:2,33:34:81.22:1017,81,0	1/1:9,0:9:8.59:68,9,0	1/1:13,0:13:9.38:72,9,0	0/0:25,0:25:47.24:0,47,451	0/0:26,0:26:75.25:0,75,1159	0/0:47,0:47:99:0,130,1947	0/0:25,0:25:38.21:0,38,411	1/1:7,0:6:12.49:115,12,0	0/0:13,0:13:2.04:0,2,6	1/1:31,0:25:9.95:76,10,0	1/1:14,0:13:12.91:95,13,0	1/1:3,13:13:33.11:428,33,0	1/1:4,31:34:84.19:1024,84,0	1/1:13,0:13:8.97:69,9,0	0/0:29,0:29:82.52:0,83,1247	1/1:12,0:12:21.02:226,21,0	0/0:20,0:20:53.67:0,54,820
chr10	37039081	.	G	GTGTGA	10970.74	PASS	AB=0.763;AC=36;AF=0.667;AN=54;BaseQRankSum=-7.816;DP=684;FS=2.807;HRun=0;HaplotypeScore=162.5591;InbreedingCoeff=0.7626;MQ=62.85;MQ0=4;MQRankSum=-2.582;QD=25.34;ReadPosRankSum=-1.504;VQSLOD=4.6643;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,31:44:45.60:1359,46,0	1/1:0,0:6:3.01:47,3,0	0/0:33,0:26:67.61:0,68,1123	0/0:28,0:22:49.63:0,50,805	0/0:21,0:22:54.18:0,54,1051	1/1:6,22:30:45.15:1348,45,0	1/1:7,27:42:33.07:982,33,0	1/1:0,0:15:45.15:716,45,0	0/0:33,0:33:87.28:0,87,1725	1/1:9,22:35:72.19:1652,72,0	1/1:1,9:11:9.03:285,9,0	0/1:34,0:34:2.43:139,0,2	1/1:2,0:11:9.03:169,9,0	1/1:1,0:15:12.04:224,12,0	0/1:5,20:26:22.95:1110,0,23	0/0:26,0:26:70.93:0,71,1526	0/0:48,0:48:99:0,100,2575	1/1:2,21:26:25.93:1232,26,0	1/1:0,0:7:21.07:333,21,0	./.	1/1:4,0:25:11.67:191,12,0	1/1:0,0:15:18.06:287,18,0	1/1:14,0:14:1.03:77,1,0	1/1:37,0:38:16.40:327,16,0	1/1:0,0:13:9.03:143,9,0	0/0:28,0:28:81.25:0,81,1536	1/1:0,0:12:21.07:348,21,0	0/0:20,0:20:48.16:0,48,997
chr10	37039205	.	G	GCA	5685.71	PASS	AB=0.845;AC=32;AF=0.593;AN=54;BaseQRankSum=0.872;DP=714;FS=3.457;HRun=0;HaplotypeScore=119.4558;InbreedingCoeff=0.0424;MQ=59.53;MQ0=15;MQRankSum=-0.209;QD=10.53;ReadPosRankSum=-0.410;VQSLOD=4.6990;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:22,19:43:99:501,0,108	1/1:7,0:8:11.99:104,12,0	./.	0/0:38,0:14:6.01:0,6,59	0/0:16,0:16:20.98:0,21,213	0/1:19,9:30:99:140,0,113	0/1:16,21:38:99:630,0,122	1/1:29,0:29:30.40:267,30,0	0/0:25,0:28:35.76:0,36,370	0/1:13,7:20:43.73:327,0,44	0/1:8,1:10:5.83:40,0,6	1/1:36,0:36:42.58:675,43,0	1/1:25,0:25:4.56:95,5,0	0/1:21,0:21:2.58:142,0,3	0/1:15,7:22:77.41:174,0,77	0/0:30,0:36:73.51:0,74,692	0/0:20,0:24:53.77:0,54,551	0/1:15,14:31:36.13:652,0,36	1/1:18,0:18:19.75:127,20,0	0/1:12,0:12:7.68:22,0,8	0/1:53,0:52:52.14:131,0,52	1/1:20,1:21:11.89:137,12,0	0/1:10,0:11:28.98:131,0,29	0/1:43,0:43:21.32:761,0,21	1/1:9,0:9:2.04:6,2,0	1/1:15,8:27:19.35:287,19,0	1/1:20,0:20:29.96:309,30,0	1/1:4,0:11:3:26,3,0
chr10	37039229	.	A	ACACACACG	3850.10	PASS	AB=0.746;AC=19;AF=0.352;AN=54;BaseQRankSum=0.536;DP=766;FS=53.539;HRun=0;HaplotypeScore=187.7015;InbreedingCoeff=0.4320;MQ=57.78;MQ0=18;MQRankSum=-4.324;QD=11.26;ReadPosRankSum=-4.895;VQSLOD=-0.5338;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:45:86.39:0,86,915	1/1:2,6:10:12.04:441,12,0	0/0:28,0:10:30.04:0,30,298	0/0:41,0:21:46.95:0,47,454	0/0:20,0:20:26.99:0,27,530	0/0:32,0:32:31.30:0,31,543	0/0:39,0:39:42.12:0,42,819	1/1:24,0:24:57.35:606,57,0	0/0:28,0:28:54.10:0,54,1100	0/0:21,0:20:50.81:0,51,543	0/0:8,0:8:8.98:0,9,86	0/1:4,0:36:31.09:31,0,51	0/1:5,11:21:5.91:432,0,6	0/1:5,11:21:2.52:592,0,3	0/0:22,0:22:35.77:0,36,397	0/0:32,0:31:73.05:0,73,1788	0/0:27,0:25:69.14:0,69,1398	0/1:42,0:41:37.37:37,0,704	1/1:17,0:15:30.16:245,30,0	1/1:5,8:14:0.48:125,0,0	0/1:18,50:86:69.04:179,0,69	1/1:21,0:21:29.96:415,30,0	0/0:3,0:13:13.69:0,14,111	0/0:6,0:48:31.08:0,31,234	./.	0/1:20,0:20:99:103,0,162	1/1:16,0:19:41.66:635,42,0	0/1:8,0:8:9.41:9,0,18
chr10	37041267	.	A	ATTTC	6385.61	PASS	AB=0.731;AC=34;AF=0.654;AN=52;BaseQRankSum=7.634;DP=262;FS=103.255;HRun=0;HaplotypeScore=52.8342;InbreedingCoeff=0.7021;MQ=47.47;MQ0=15;MQRankSum=-9.383;QD=42.29;ReadPosRankSum=-0.980;VQSLOD=1.4794;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,13:15:33.03:716,33,0	./.	0/0:13,0:10:19.64:0,20,420	0/0:5,0:2:6.02:0,6,114	0/0:14,0:14:42.13:0,42,763	1/1:4,14:16:32.89:778,33,0	0/1:3,4:6:41.52:239,0,42	0/1:15,4:15:99:329,0,134	0/0:3,0:3:9.03:0,9,170	1/1:3,8:11:27.05:633,27,0	1/1:2,6:7:17.98:399,18,0	1/1:4,0:4:12.02:134,12,0	1/1:0,3:3:9.03:229,9,0	1/1:4,1:5:11.84:130,12,0	1/1:4,4:6:17.90:239,18,0	0/0:11,0:11:33.11:0,33,595	0/0:34,0:34:99:0,102,1872	1/1:5,12:14:35.96:693,36,0	1/1:1,4:5:12.01:252,12,0	1/1:1,4:5:15.04:331,15,0	1/1:1,1:2:6.01:101,6,0	1/1:0,1:1:3.01:75,3,0	./.	1/1:1,0:1:3.01:36,3,0	1/1:1,9:9:27.09:688,27,0	0/0:22,0:22:38.26:0,38,1050	1/1:1,5:6:15.05:382,15,0	0/0:7,0:7:21.07:0,21,392
chr10	37041268	.	T	TTTC	3864.56	PASS	AB=1.000;AC=32;AF=0.615;AN=52;BaseQRankSum=10.448;DP=263;FS=97.603;HRun=0;HaplotypeScore=57.2866;InbreedingCoeff=0.5937;MQ=47.32;MQ0=16;MQRankSum=-8.540;QD=25.26;ReadPosRankSum=-1.455;VQSLOD=-0.0637;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:15:33.03:440,33,0	./.	0/0:13,0:10:27.47:0,27,394	0/0:5,0:2:6.02:0,6,102	0/0:14,0:14:42.13:0,42,688	1/1:20,0:17:32.88:432,33,0	0/1:7,0:6:35.84:136,0,36	0/1:19,0:15:99:172,0,131	0/0:3,0:3:9.03:0,9,153	1/1:10,0:10:27.05:356,27,0	0/1:8,0:7:5.15:205,0,5	1/1:3,3:5:12.03:217,12,0	1/1:3,0:3:9.03:127,9,0	0/1:5,0:5:4.97:81,0,5	1/1:8,0:6:17.90:169,18,0	0/0:11,0:11:33.11:0,33,538	0/0:34,0:34:99:0,102,1705	1/1:17,0:14:35.96:417,36,0	1/1:6,0:6:11.16:146,11,0	1/1:5,0:5:15.04:192,15,0	1/1:2,0:2:6.01:67,6,0	1/1:1,0:1:3.01:58,3,0	./.	1/1:0,1:1:3.01:64,3,0	1/1:9,0:8:27.09:377,27,0	0/0:21,0:21:38.26:0,38,947	1/1:6,0:6:15.05:209,15,0	0/0:7,0:7:21.07:0,21,334
chr10	37047127	.	CCA	C	110.58	PASS	AB=0.952;AC=9;AF=0.161;AN=56;BaseQRankSum=4.699;DP=583;FS=0.690;HRun=0;HaplotypeScore=123.3152;InbreedingCoeff=-0.1823;MQ=53.19;MQ0=14;MQRankSum=-3.598;QD=0.74;ReadPosRankSum=-3.933;VQSLOD=1.1792;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:27:32.79:33,0,335	0/0:11,0:10:18.06:0,18,309	0/0:54,0:27:77.30:0,77,1227	0/0:47,0:25:63.11:0,63,1123	0/0:13,0:12:15.04:0,15,222	0/0:12,0:12:7.13:0,7,390	0/0:26,0:26:21.29:0,21,785	0/0:21,0:21:60.13:0,60,1069	0/1:14,0:13:68.30:68,0,241	0/0:19,0:19:22.16:0,22,675	0/1:12,0:12:0.89:1,0,262	0/0:21,0:20:29.03:0,29,475	0/0:24,0:24:33.94:0,34,549	0/0:14,0:14:26.68:0,27,396	0/1:24,0:23:3.77:4,0,523	0/0:22,0:22:13.23:0,13,463	0/1:19,1:20:41.40:41,0,427	0/1:12,0:12:6.93:7,0,162	0/1:18,1:16:39.77:40,0,478	0/0:12,0:12:15.05:0,15,232	0/0:34,0:32:69.18:0,69,987	0/1:16,0:15:12.07:12,0,295	0/0:14,1:15:32.82:0,33,408	0/0:35,1:36:4.22:0,4,564	0/0:11,0:11:18.05:0,18,265	0/0:29,0:28:67.12:0,67,1110	0/0:13,0:13:17.52:0,18,261	0/1:2,2:4:32.41:32,0,44
chr10	37047129	.	A	AACACACACACAC	13411.83	PASS	AB=0.696;AC=51;AF=0.911;AN=56;BaseQRankSum=-2.319;DP=738;FS=19.775;HRun=0;HaplotypeScore=219.0507;InbreedingCoeff=0.4452;MQ=52.51;MQ0=14;MQRankSum=-3.113;QD=21.12;ReadPosRankSum=0.033;VQSLOD=2.5618;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:18,19:38:21.54:885,22,0	1/1:12,0:11:3.01:152,3,0	0/0:54,0:28:26.96:0,27,524	0/0:48,0:27:0.63:0,1,184	0/1:9,0:15:0:0,0,0	1/1:10,3:14:0.99:393,1,0	1/1:25,9:41:21.45:1207,21,0	1/1:27,0:26:30.05:686,30,0	1/1:16,0:15:20.74:455,21,0	1/1:9,10:20:30.08:1429,30,0	1/1:9,0:15:9.03:304,9,0	1/1:15,0:32:12.27:479,12,0	1/1:17,0:34:16.30:433,16,0	1/1:10,0:27:12.93:421,13,0	1/1:17,2:34:18.06:838,18,0	1/1:13,0:26:6.49:221,6,0	1/1:21,0:21:18.06:569,18,0	1/1:8,7:16:9.25:558,9,0	1/1:23,0:20:43.95:975,44,0	1/1:6,0:14:0.47:1,0,0	1/1:30,0:43:3.01:77,3,0	1/1:18,0:16:8.76:206,9,0	1/1:16,0:16:2.79:116,3,0	1/1:36,0:36:24.47:554,24,0	1/1:5,0:16:6.02:286,6,0	1/1:19,0:36:58.77:1608,59,0	1/1:12,0:27:20.10:482,20,0	1/1:6,0:6:3.01:77,3,0
chr10	37047141	.	C	CACACACACACACACACAC	14453.59	PASS	AB=1.000;AC=50;AF=0.893;AN=56;BaseQRankSum=-2.578;DP=728;FS=15.045;HRun=0;HaplotypeScore=270.1888;InbreedingCoeff=0.4858;MQ=52.40;MQ0=15;MQRankSum=-3.174;QD=23.31;ReadPosRankSum=3.160;VQSLOD=2.0629;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:41,0:40:22.01:594,22,0	1/1:5,7:13:9.03:350,9,0	0/0:56,0:25:26.97:0,27,574	0/0:51,0:30:0.28:0,0,184	0/1:15,0:14:0:0,0,0	1/1:13,0:13:8.79:287,9,0	1/1:40,0:40:3.66:797,4,0	1/1:36,0:35:43.43:877,43,0	1/1:20,0:19:19.60:641,20,0	1/1:15,0:15:33.09:1016,33,0	1/1:13,0:13:9.03:246,9,0	1/1:32,0:30:12.59:734,13,0	1/1:30,0:30:19.62:569,20,0	1/1:25,0:25:13.29:598,13,0	1/1:30,0:29:18.53:595,19,0	1/1:28,0:28:5.54:228,6,0	1/1:25,0:25:21.07:1019,21,0	1/1:14,0:14:12.04:385,12,0	1/1:22,0:20:44.50:1231,45,0	0/1:16,0:15:0:0,0,0	1/1:40,0:39:6.27:374,6,0	1/1:18,0:16:8.94:206,9,0	1/1:16,0:16:3:116,3,0	1/1:35,0:35:21.12:675,21,0	1/1:12,0:12:6.02:421,6,0	1/1:35,0:32:52.74:1819,53,0	1/1:29,0:28:20.75:560,21,0	1/1:5,0:5:3.01:115,3,0
chr10	37047326	.	CA	C	14315.15	PASS	AB=0.947;AC=49;AF=0.875;AN=56;BaseQRankSum=0.284;DP=633;FS=29.265;HRun=7;HaplotypeScore=71.7013;InbreedingCoeff=0.8856;MQ=80.83;MQ0=0;MQRankSum=-4.986;QD=23.98;ReadPosRankSum=2.537;VQSLOD=3.1957;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,49:51:99:1133,112,0	1/1:1,8:9:24.01:234,24,0	0/0:16,0:16:36.06:0,36,424	0/1:17,1:18:0.20:0,0,321	1/1:5,16:20:48.10:489,48,0	1/1:3,22:25:57.13:582,57,0	1/1:4,15:19:39.09:398,39,0	1/1:3,24:27:69.15:704,69,0	1/1:2,20:22:57.13:581,57,0	1/1:2,16:18:42.05:414,42,0	1/1:1,10:11:27.06:275,27,0	1/1:6,28:34:72.16:734,72,0	1/1:2,24:26:63.03:642,63,0	1/1:2,18:20:42.09:428,42,0	1/1:1,31:32:84.19:857,84,0	1/1:1,22:23:60.14:612,60,0	1/1:1,41:42:99:1070,105,0	1/1:0,21:21:60.14:612,60,0	1/1:0,16:16:48.08:480,48,0	1/1:5,20:25:54.12:551,54,0	1/1:1,28:29:78.18:796,78,0	1/1:1,16:17:45.10:459,45,0	1/1:4,11:15:20.78:214,21,0	1/1:4,31:35:83.93:857,84,0	1/1:0,17:17:48.11:490,48,0	0/0:16,0:16:42.10:0,42,511	1/1:0,24:24:69.02:702,69,0	0/0:4,0:4:6.02:0,6,75
chr10	37047432	.	A	AG	7019.57	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-15.449;DP=716;FS=8.384;HRun=2;HaplotypeScore=72.5484;InbreedingCoeff=0.9936;MQ=90.88;MQ0=0;MQRankSum=-1.461;QD=34.92;ReadPosRankSum=0.713;VQSLOD=5.0178;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,52:56:99:1812,126,0	0/0:14,0:14:36.10:0,36,432	0/0:32,0:33:77.13:0,77,879	0/0:27,0:27:66.10:0,66,783	0/0:15,0:15:33.09:0,33,396	1/1:1,24:25:69.23:994,69,0	1/1:2,29:31:63.21:907,63,0	0/0:25,0:25:66.19:0,66,796	0/0:25,0:25:69.22:0,69,852	1/1:1,25:26:75.24:1060,75,0	1/1:1,8:9:21.07:302,21,0	0/0:28,0:28:78.22:0,78,931	0/0:21,0:21:60.17:0,60,730	0/0:33,0:33:99:0,99,1201	1/1:0,35:35:87.10:1253,87,0	0/0:21,0:21:63.19:0,63,768	0/0:35,0:35:99:0,102,1250	1/1:0,19:19:48.16:691,48,0	0/0:23,0:23:69.22:0,69,854	0/0:19,0:19:57.17:0,57,694	0/0:52,0:52:99:0,138,1680	0/0:17,0:17:51.16:0,51,631	0/0:14,0:14:42.13:0,42,520	0/0:41,0:41:99:0,123,1524	0/0:17,0:17:51.16:0,51,631	0/0:25,0:25:66.21:0,66,818	0/0:25,0:25:75.21:0,75,904	0/0:5,0:5:12.04:0,12,149
chr10	37049437	.	ATGGATG	A	7757.07	PASS	AB=1.000;AC=37;AF=0.661;AN=56;BaseQRankSum=-12.740;DP=742;FS=27.129;HRun=0;HaplotypeScore=123.8255;InbreedingCoeff=-0.1793;MQ=50.25;MQ0=84;MQRankSum=-4.462;QD=11.10;ReadPosRankSum=-9.725;VQSLOD=0.0719;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:5,23:26:6.02:85,6,0	0/0:3,0:2:2.74:0,3,12	0/0:21,0:4:5.98:0,6,47	0/1:24,0:4:15.48:79,0,15	0/1:15,0:11:45.53:90,0,46	1/1:1,16:17:3.01:44,3,0	1/1:33,0:27:51.17:852,51,0	1/1:34,0:32:75.24:1056,75,0	0/1:32,0:25:99:176,0,247	1/1:10,24:24:51.99:882,52,0	1/1:9,1:7:11.72:184,12,0	1/1:6,37:43:14.44:317,14,0	0/1:30,0:26:70.62:71,0,561	0/1:28,0:23:99:144,0,444	1/1:5,26:29:22.99:463,23,0	0/1:36,0:27:99:262,0,167	0/1:37,0:35:99:234,0,270	1/1:21,0:18:24.08:494,24,0	0/1:15,0:8:40.79:153,0,41	0/1:14,0:12:99:119,0,189	0/1:73,0:67:99:643,0,572	0/1:21,0:14:72.32:150,0,72	0/0:3,15:16:2.95:0,3,37	1/1:9,41:47:9.03:131,9,0	0/1:19,0:16:99:130,0,187	1/1:5,16:18:45.14:740,45,0	0/1:21,0:17:99:123,0,291	1/1:3,9:11:6.02:137,6,0
chr10	37049441	.	ATG	A	7123.13	PASS	AB=0.966;AC=42;AF=0.750;AN=56;BaseQRankSum=-8.402;DP=716;FS=47.487;HRun=0;HaplotypeScore=95.5280;InbreedingCoeff=0.2178;MQ=51.05;MQ0=82;MQRankSum=-4.957;QD=11.10;ReadPosRankSum=-5.912;VQSLOD=2.0881;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:25:6.02:85,6,0	0/0:3,0:2:2.50:0,2,9	0/0:19,1:4:6.46:0,6,59	0/1:19,2:3:8.72:79,0,9	1/1:3,10:9:18.02:241,18,0	1/1:16,0:16:3.01:44,3,0	1/1:17,15:26:25.65:342,26,0	1/1:6,26:31:78.21:1093,78,0	1/1:4,28:25:72.24:1058,72,0	1/1:32,1:23:49.14:349,49,0	1/1:8,1:6:2.41:15,2,0	1/1:37,0:37:14.65:132,15,0	0/0:31,1:28:20.85:0,21,97	0/1:25,1:21:27.20:27,0,72	1/1:28,0:26:23.43:194,23,0	1/1:4,29:24:72.19:1033,72,0	1/1:2,31:31:75.25:1095,75,0	1/1:24,1:22:13.10:129,13,0	1/1:16,0:9:11.46:240,11,0	0/1:11,1:10:17.66:80,0,18	0/1:75,1:71:93.06:93,0,108	1/1:21,0:14:3.78:118,4,0	0/0:18,0:16:2.08:0,2,35	1/1:47,0:44:9.03:131,9,0	0/1:19,0:16:23.44:42,0,23	1/1:20,0:17:44.08:440,44,0	0/1:21,0:17:17.14:17,0,40	1/1:11,0:10:5.97:44,6,0
chr10	37049442	.	T	TGG	8408.86	PASS	AB=1.000;AC=43;AF=0.768;AN=56;BaseQRankSum=-10.626;DP=711;FS=0.508;HRun=1;HaplotypeScore=90.4699;InbreedingCoeff=0.1696;MQ=51.08;MQ0=83;MQRankSum=-0.656;QD=12.70;ReadPosRankSum=-3.957;VQSLOD=0.2737;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:25:6.02:86,6,0	1/1:3,0:2:3.01:37,3,0	0/0:21,0:4:6.88:0,7,52	0/1:21,0:3:9.73:42,0,10	0/1:13,0:9:19.25:44,0,19	1/1:16,0:16:3:26,3,0	1/1:25,6:25:51.13:790,51,0	1/1:30,0:29:78.10:957,78,0	0/1:32,0:25:96.23:96,0,107	1/1:33,0:23:44.36:713,44,0	1/1:4,4:5:11.93:188,12,0	0/1:37,0:37:0.39:51,0,0	1/1:32,0:28:44.94:575,45,0	1/1:27,0:22:38.20:590,38,0	0/1:28,0:26:4.36:100,0,4	0/1:33,0:24:86.02:131,0,86	0/1:33,0:31:94.63:95,0,134	1/1:17,8:22:20.27:398,20,0	1/1:17,0:9:23.96:219,24,0	1/1:11,1:10:24.52:268,25,0	1/1:75,0:70:96.04:1246,96,0	1/1:21,0:14:25.35:287,25,0	0/0:18,0:16:2.84:0,3,38	1/1:46,0:43:9:80,9,0	1/1:20,0:17:27.08:335,27,0	1/1:19,0:17:41.96:608,42,0	1/1:22,0:18:36.11:448,36,0	0/0:10,0:9:4.04:0,4,12
chr10	37049443	.	G	GGA	11528.35	PASS	AB=0.982;AC=49;AF=0.875;AN=56;BaseQRankSum=-9.271;DP=726;FS=0.000;HRun=0;HaplotypeScore=86.8981;InbreedingCoeff=0.2147;MQ=51.06;MQ0=81;MQRankSum=-0.252;QD=16.28;ReadPosRankSum=-5.489;VQSLOD=3.2708;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:28,1:27:5.36:84,5,0	1/1:0,3:2:3.01:61,3,0	0/1:22,0:4:1.75:2,0,42	0/1:23,0:3:15.20:79,0,15	1/1:12,1:9:10.26:113,10,0	1/1:17,0:17:6.02:87,6,0	1/1:23,4:24:46.67:611,47,0	1/1:28,0:28:81.22:1137,81,0	1/1:29,3:25:15.61:322,16,0	1/1:32,2:24:39.14:455,39,0	1/1:8,0:5:11.92:113,12,0	0/1:37,0:37:2.13:41,0,2	1/1:1,29:28:45.15:912,45,0	1/1:2,27:24:47.19:973,47,0	0/1:27,0:26:6:97,0,6	1/1:29,4:24:32.52:442,33,0	1/1:35,2:35:18.26:392,18,0	1/1:10,10:22:24.63:228,25,0	1/1:6,10:11:27.09:421,27,0	1/1:2,10:10:24.97:455,25,0	1/1:4,71:72:99:2070,106,0	1/1:2,18:14:26.50:451,26,0	0/0:17,1:16:1.25:0,1,34	1/1:44,3:44:10.28:135,10,0	1/1:3,18:18:27.09:547,27,0	1/1:17,3:17:45.12:567,45,0	1/1:1,22:19:36.12:731,36,0	0/1:9,1:9:1.14:5,0,1
chr10	37049497	.	TAGACAGAC	T	4934.30	PASS	AB=0.964;AC=21;AF=0.375;AN=56;BaseQRankSum=9.459;DP=680;FS=0.484;HRun=0;HaplotypeScore=174.4774;InbreedingCoeff=0.8492;MQ=52.09;MQ0=55;MQRankSum=-11.651;QD=19.13;ReadPosRankSum=-1.811;VQSLOD=4.1112;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:22,10:31:27.09:640,27,0	0/0:11,0:10:27.98:0,28,1108	0/0:28,0:15:3.01:0,3,97	0/0:31,0:18:9.03:0,9,301	1/1:18,0:16:3.20:9,3,0	1/1:14,7:21:21.07:526,21,0	1/1:18,3:19:23.83:409,24,0	0/0:29,0:29:21.07:0,21,610	1/1:35,0:29:64.57:1176,65,0	1/1:13,5:14:15.05:376,15,0	1/1:6,5:10:17.97:256,18,0	0/0:41,0:41:69.13:0,69,2790	0/0:28,0:24:48.16:0,48,1958	0/0:30,0:25:60.19:0,60,2294	1/1:11,8:17:24.08:600,24,0	1/1:34,0:26:45.15:798,45,0	1/1:22,0:20:8.76:124,9,0	0/0:11,0:15:23.95:0,24,196	0/0:22,0:22:33.99:0,34,1153	0/0:14,0:12:21.07:0,21,763	0/0:41,0:39:54.17:0,54,2017	0/0:19,0:13:27.09:0,27,1065	0/0:15,0:14:24.08:0,24,939	0/0:42,0:39:63.22:0,63,2588	0/0:20,0:18:27.09:0,27,1082	0/1:19,1:25:20.99:21,0,1582	0/0:22,0:18:36.12:0,36,1441	0/0:7,0:10:15.05:0,15,506
chr10	37049530	.	AGACAGACAGACG	A	6957.80	PASS	AB=1.000;AC=18;AF=0.321;AN=56;BaseQRankSum=-2.269;DP=699;FS=6.191;HRun=0;HaplotypeScore=255.4894;InbreedingCoeff=0.1812;MQ=60.09;MQ0=12;MQRankSum=-6.132;QD=20.29;ReadPosRankSum=-5.998;VQSLOD=2.1654;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:46.93:0,47,393	0/1:13,0:13:44.99:45,0,1307	0/0:35,0:21:63.07:0,63,1236	0/0:37,0:25:71.89:0,72,1156	1/1:1,17:17:44.94:590,45,0	0/0:24,0:24:46.60:0,47,446	0/0:22,0:22:48.59:0,49,390	0/1:27,0:26:99:273,0,1040	1/1:9,23:30:87.22:2828,87,0	0/0:21,0:20:48.21:0,48,462	0/0:11,0:11:29.04:0,29,299	0/0:45,0:45:99:0,117,5002	0/1:29,0:29:59.20:59,0,2420	0/1:36,0:36:99:140,0,2869	0/0:20,0:20:46.33:0,46,312	1/1:0,30:30:45.15:1720,45,0	1/1:12,3:15:39.77:571,40,0	0/0:17,0:17:36.07:0,36,909	0/1:33,0:31:99:301,0,1600	0/1:16,0:15:84.85:85,0,918	0/1:40,0:40:99:123,0,2634	0/1:19,0:19:99:148,0,1300	0/0:15,0:15:45.03:0,45,1718	0/0:33,0:33:81.24:0,81,4372	0/1:18,0:18:43.63:44,0,1432	0/0:33,0:32:95.27:0,95,3120	0/1:17,0:17:30.84:31,0,1719	0/0:12,0:12:36.05:0,36,1267
chr10	37050713	.	CT	C	10464.51	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=13.650;DP=667;FS=7.096;HRun=7;HaplotypeScore=63.8318;InbreedingCoeff=0.9975;MQ=72.77;MQ0=1;MQRankSum=-1.285;QD=25.52;ReadPosRankSum=0.406;VQSLOD=5.3674;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,114,1419	1/1:1,10:11:30.07:306,30,0	0/0:21,0:18:45:0,45,533	0/0:19,0:18:30.21:0,30,456	1/1:2,24:26:69.15:703,69,0	0/0:26,0:26:72.21:0,72,890	0/0:17,0:17:45.14:0,45,566	1/1:8,29:37:81.11:801,81,0	1/1:3,17:20:42.09:428,42,0	0/0:31,0:31:87.28:0,87,1085	0/0:25,0:25:69.22:0,69,866	1/1:1,17:18:45.10:459,45,0	1/1:2,14:16:42.10:429,42,0	1/1:1,24:25:60.14:612,60,0	0/0:22,0:22:63.20:0,63,793	1/1:1,20:21:57.13:582,57,0	1/1:1,28:29:84.19:857,84,0	0/0:23,0:23:63.20:0,63,790	1/1:3,25:27:75.15:758,75,0	1/1:6,28:34:78.17:796,78,0	1/1:4,16:20:45.09:459,45,0	1/1:1,20:21:57.13:581,57,0	1/1:2,26:28:75.17:765,75,0	1/1:0,14:14:36.08:367,36,0	1/1:1,29:30:75.17:765,75,0	0/0:27,0:27:72.23:0,72,906	1/1:4,28:32:78.17:796,78,0	0/0:6,0:6:15.05:0,15,186
chr10	37051928	.	C	CA	1464.71	PASS	AB=0.947;AC=15;AF=0.288;AN=52;BaseQRankSum=-5.278;DP=392;FS=9.772;HRun=7;HaplotypeScore=74.8468;InbreedingCoeff=0.8798;MQ=44.68;MQ0=15;MQRankSum=-2.506;QD=13.20;ReadPosRankSum=-1.302;VQSLOD=2.1368;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,10:13:12.04:144,12,0	0/0:6,0:6:15.01:0,15,139	./.	./.	0/0:21,0:20:29.71:0,30,288	1/1:8,8:15:36.06:382,36,0	1/1:9,6:15:24.03:273,24,0	0/0:18,0:18:36.05:0,36,347	0/0:25,0:22:45.06:0,45,434	1/1:8,6:13:18.05:216,18,0	1/1:3,4:7:8.99:92,9,0	0/0:16,0:16:23.95:0,24,225	0/0:12,0:12:24.03:0,24,232	0/0:14,0:14:20.97:0,21,193	1/1:3,8:10:23.28:261,23,0	0/0:13,0:12:14.88:0,15,143	0/0:19,0:19:37.81:0,38,353	1/1:7,8:14:24.05:276,24,0	0/0:20,0:18:43.59:0,44,409	0/0:9,0:9:18.03:0,18,173	0/0:19,0:17:26.91:0,27,260	0/0:12,0:10:24.02:0,24,225	0/0:11,0:11:21.02:0,21,202	0/0:18,0:18:33.01:0,33,309	0/0:17,0:16:36.05:0,36,347	0/1:17,1:15:9.17:9,0,204	0/0:10,0:10:18.02:0,18,174	0/0:12,0:11:11.90:0,12,116
chr10	37052174	.	AAAAT	A	9146.21	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=13.591;DP=467;FS=0.424;HRun=0;HaplotypeScore=89.2059;InbreedingCoeff=0.9453;MQ=44.36;MQ0=20;MQRankSum=-5.913;QD=31.76;ReadPosRankSum=1.349;VQSLOD=4.3106;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:29:66.23:0,66,1606	1/1:6,2:7:9.03:121,9,0	0/0:3,0:1:3.01:0,3,74	0/0:2,0:2:6.02:0,6,142	1/1:6,14:19:42.10:665,42,0	0/0:17,0:17:42.14:0,42,1011	0/0:16,0:16:33.11:0,33,773	1/1:15,14:26:35.93:473,36,0	1/1:5,9:11:30.07:469,30,0	0/0:18,0:16:24.08:0,24,571	0/0:14,0:13:27.09:0,27,653	1/1:2,17:19:51.17:845,51,0	1/1:2,16:18:48.12:795,48,0	1/1:3,13:15:42.14:683,42,0	0/0:10,0:9:18.06:0,18,442	1/1:8,12:16:36.12:597,36,0	1/1:16,21:36:69.20:1102,69,0	0/0:31,0:28:60.21:0,60,1435	1/1:5,8:11:27.09:438,27,0	1/1:6,8:13:24.08:397,24,0	1/1:4,8:11:24.08:397,24,0	1/1:4,6:9:15.05:249,15,0	1/1:5,5:9:18.06:298,18,0	1/1:7,12:19:36.08:566,36,0	1/1:6,8:12:27.05:418,27,0	0/0:21,0:20:42.14:0,42,1026	1/1:4,11:15:39.13:633,39,0	0/0:16,0:14:33.07:0,33,740
chr10	37052233	.	A	AG	10995.60	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=8.963;DP=574;FS=2.465;HRun=3;HaplotypeScore=98.4294;InbreedingCoeff=0.9938;MQ=83.64;MQ0=0;MQRankSum=-5.628;QD=32.06;ReadPosRankSum=0.266;VQSLOD=4.6740;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:84.24:0,84,996	1/1:1,5:6:12.04:168,12,0	0/0:24,0:24:66.17:0,66,753	0/0:19,0:19:50.80:0,51,569	1/1:4,18:21:24.08:336,24,0	0/0:18,0:18:51.16:0,51,612	0/0:21,0:21:63.19:0,63,743	1/1:3,26:29:75.20:1011,75,0	1/1:2,14:16:39.13:546,39,0	0/0:29,0:29:84.26:0,84,1007	0/0:16,0:16:33.10:0,33,396	1/1:2,29:31:84.24:1153,84,0	1/1:2,17:19:42.14:584,42,0	1/1:0,27:27:78.22:1068,78,0	0/0:14,0:14:39.12:0,39,468	1/1:0,23:23:63.18:861,63,0	1/1:3,33:36:90.30:1257,90,0	0/0:24,0:24:66.20:0,66,792	1/1:3,10:13:30.10:419,30,0	1/1:0,16:16:39.13:545,39,0	1/1:2,28:30:63.21:877,63,0	1/1:0,9:9:18.06:243,18,0	1/1:2,15:17:33.07:439,33,0	1/1:1,16:17:30.10:420,30,0	1/1:2,12:13:36.08:482,36,0	0/0:23,0:23:69.20:0,69,818	1/1:0,18:18:42.14:588,42,0	0/0:11,0:11:30.09:0,30,360
chr10	37052572	.	CACCATCTCTGCTAT	C	26240.94	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=16.870;DP=571;FS=3.414;HRun=0;HaplotypeScore=239.4256;InbreedingCoeff=0.9882;MQ=89.32;MQ0=0;MQRankSum=-17.207;QD=84.11;ReadPosRankSum=1.783;VQSLOD=4.7241;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,150,10168	1/1:0,5:5:9.03:317,9,0	0/0:30,0:30:78.27:0,78,4585	0/0:24,0:23:69.24:0,69,3936	1/1:0,19:19:42.04:1419,42,0	0/0:19,0:19:57.20:0,57,3564	0/0:27,0:27:81.28:0,81,5041	1/1:8,20:27:60.20:2027,60,0	1/1:3,15:18:48.16:2017,48,0	0/0:27,0:27:81.28:0,81,5228	0/0:12,0:12:33.11:0,33,2118	1/1:1,19:20:42.14:1775,42,0	1/1:2,26:28:78.27:3282,78,0	1/1:2,23:25:51.18:2155,51,0	0/0:15,0:15:45.15:0,45,3030	1/1:2,11:13:33.11:1394,33,0	1/1:3,28:31:58.36:2175,58,0	0/0:21,0:21:54.19:0,54,3614	1/1:6,8:14:24.08:939,24,0	1/1:1,10:11:30.10:1267,30,0	1/1:5,17:22:21.07:841,21,0	1/1:1,12:13:36.12:1423,36,0	1/1:1,14:15:33.11:1384,33,0	1/1:1,16:17:15.27:527,15,0	1/1:0,11:11:27.09:1141,27,0	0/0:21,0:21:54.19:0,54,3779	1/1:0,21:22:51.18:2156,51,0	0/0:10,0:10:30.10:0,30,1836
chr10	37053317	.	TACACACACACACACACACACAC	T	2186.91	PASS	AB=0.845;AC=21;AF=0.420;AN=50;BaseQRankSum=5.803;DP=398;FS=9.407;HRun=0;HaplotypeScore=217.6116;InbreedingCoeff=0.1148;MQ=70.59;MQ0=16;MQRankSum=-2.339;QD=11.10;ReadPosRankSum=1.061;VQSLOD=1.4923;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:12.04:0,12,217	1/1:7,0:9:4.83:145,5,0	0/0:36,0:21:0.47:0,0,1	0/0:26,0:14:3.01:0,3,40	./.	0/1:14,0:14:32.32:32,0,280	0/0:12,0:13:9.58:0,10,119	0/0:12,0:11:2.90:0,3,16	./.	0/1:9,0:12:99:179,0,130	0/0:3,0:9:0.84:0,1,92	1/1:14,0:15:12.01:309,12,0	1/1:5,0:6:9.02:214,9,0	0/1:3,0:8:14.95:108,0,15	0/1:8,0:8:86.49:86,0,141	1/1:8,0:9:9.02:243,9,0	1/1:12,2:13:9:364,9,0	0/1:14,0:14:23.29:23,0,167	1/1:15,0:14:3.01:140,3,0	0/0:11,1:16:3:0,3,25	0/1:14,0:13:17.05:17,0,20	./.	0/1:15,0:15:0:0,0,0	0/1:8,8:15:0:0,0,0	0/0:7,0:9:2.99:0,3,23	0/0:11,0:11:15.05:0,15,415	0/1:16,1:24:42.89:471,0,43	0/0:7,0:7:9.03:0,9,224
chr10	37053351	.	CACACACACACACACAGAGAGAG	C	4095.99	PASS	AB=0.949;AC=30;AF=0.682;AN=44;BaseQRankSum=6.146;DP=441;FS=2.791;HRun=0;HaplotypeScore=186.1837;InbreedingCoeff=-0.0260;MQ=34.43;MQ0=39;MQRankSum=-0.003;QD=12.72;ReadPosRankSum=2.191;VQSLOD=2.5778;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:40,0:36:2.82:23,3,0	1/1:7,0:7:3.24:154,3,0	./.	./.	./.	0/1:7,15:22:41.51:109,0,42	1/1:18,0:17:9.53:196,10,0	0/0:19,0:17:15.28:0,15,134	0/1:18,0:16:26.92:44,0,27	1/1:35,0:33:44.15:1324,44,0	1/1:16,0:15:0.60:1,1,0	0/1:15,0:14:99:162,0,142	1/1:8,0:7:9.03:211,9,0	1/1:15,0:15:11.77:129,12,0	1/1:17,0:15:6.02:190,6,0	1/1:10,0:8:5.62:155,6,0	0/1:11,0:7:14.79:267,0,15	1/1:16,0:14:8.88:209,9,0	0/1:14,0:13:51.05:135,0,51	0/0:11,0:10:0.89:0,1,2	./.	./.	1/1:9,0:9:3.31:16,3,0	0/0:26,0:23:14.92:0,15,403	./.	0/1:13,0:13:62.54:96,0,63	0/1:30,0:29:20.98:653,0,21	0/1:8,0:6:9.42:22,0,9
chr10	37053365	.	CAGAGAGAGAG	C	1737.26	PASS	AB=0.843;AC=22;AF=0.500;AN=44;BaseQRankSum=5.225;DP=464;FS=39.224;HRun=0;HaplotypeScore=149.2724;InbreedingCoeff=0.0328;MQ=35.77;MQ0=32;MQRankSum=-0.763;QD=5.68;ReadPosRankSum=1.927;VQSLOD=1.2037;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:11,24:34:0.11:0,0,1	0/1:10,0:10:4.77:60,0,5	./.	./.	./.	./.	0/1:6,2:14:0.04:1,0,0	0/0:23,0:21:22.08:0,22,149	0/1:19,0:17:29.98:61,0,30	1/1:12,17:30:35.24:708,35,0	0/1:9,5:15:0:0,0,0	0/1:19,0:18:47.82:48,0,277	1/1:12,0:11:5.95:134,6,0	1/1:14,0:14:6.02:110,6,0	0/1:5,0:13:0:0,0,0	1/1:13,0:11:0.21:66,0,0	0/1:16,0:12:21.62:95,0,22	1/1:10,0:14:2.91:52,3,0	0/1:16,0:15:49.73:50,0,71	0/0:12,0:11:0.89:0,1,3	./.	0/1:13,0:13:0:0,0,0	0/0:12,0:12:1.68:0,2,5	0/0:29,0:27:18.06:0,18,646	./.	0/1:4,0:12:31.86:43,0,32	0/1:32,0:31:37.68:432,0,38	0/0:5,0:5:5.36:0,5,31
chr10	37053388	.	AGAGAGAGAGAGAGAGAGC	A	2188.39	PASS	AB=1.000;AC=26;AF=0.481;AN=54;BaseQRankSum=1.325;DP=534;FS=0.798;HRun=0;HaplotypeScore=176.8711;InbreedingCoeff=0.2081;MQ=42.10;MQ0=38;MQRankSum=-0.987;QD=6.65;ReadPosRankSum=-0.403;VQSLOD=2.1118;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:33:14.57:0,15,160	1/1:4,4:7:1.92:144,2,0	0/0:23,0:4:9.50:0,10,218	0/0:29,0:9:13.26:0,13,335	0/1:21,0:21:10.96:86,0,11	0/0:21,0:21:3:0,3,25	0/0:17,0:15:8.10:0,8,244	0/1:19,0:14:18.06:69,0,18	0/1:18,0:16:8.66:47,0,9	0/1:32,0:30:0.47:0,0,631	0/0:13,0:12:2.84:0,3,14	0/1:22,0:22:35.20:35,0,838	1/1:15,1:15:6.02:260,6,0	1/1:13,1:14:6.02:205,6,0	0/0:16,0:15:9:0,9,163	1/1:18,0:17:2.66:50,3,0	0/1:17,0:15:33.86:162,0,34	0/0:14,0:12:8.89:0,9,98	1/1:16,0:15:19.40:271,19,0	1/1:14,0:13:5.46:49,5,0	1/1:20,0:14:9:140,9,0	1/1:14,0:13:2.94:18,3,0	0/1:15,0:15:13.71:14,0,386	0/1:31,0:28:3.89:4,0,1070	./.	0/0:13,0:13:28.71:0,29,779	1/1:32,2:33:0.55:799,1,0	0/0:11,0:7:8.96:0,9,198
chr10	37053390	.	AGAGAGAGAGAGAGAGC	A	2808.18	PASS	AB=0.989;AC=29;AF=0.537;AN=54;BaseQRankSum=-0.070;DP=539;FS=0.000;HRun=0;HaplotypeScore=168.8922;InbreedingCoeff=0.4196;MQ=45.35;MQ0=39;MQRankSum=-1.023;QD=8.51;ReadPosRankSum=-0.578;VQSLOD=2.1734;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:33:14.54:0,15,136	1/1:8,0:7:2.58:128,3,0	0/0:25,0:5:9.92:0,10,163	0/0:33,0:11:18.29:0,18,245	1/1:19,0:19:10.56:148,11,0	0/0:21,0:21:3:0,3,25	0/0:18,0:16:11.12:0,11,205	1/1:21,0:16:14.58:141,15,0	1/1:18,0:16:7.50:119,7,0	0/1:32,0:30:66.21:66,0,403	0/0:12,0:11:2.84:0,3,14	0/1:21,0:21:56.64:57,0,667	1/1:8,8:15:6.02:262,6,0	1/1:9,4:13:6.02:242,6,0	0/0:15,0:14:9:0,9,124	1/1:18,0:17:2.12:68,2,0	0/1:16,1:15:5.36:200,0,5	0/0:14,0:12:8.81:0,9,58	1/1:8,8:15:23.30:319,23,0	1/1:14,0:13:5.40:49,5,0	1/1:21,0:15:11.99:207,12,0	1/1:9,5:13:2.94:18,3,0	0/1:16,0:16:35.66:36,0,309	0/1:31,0:28:3.92:4,0,923	./.	0/0:13,0:13:27.83:0,28,601	1/1:19,16:34:17.40:926,17,0	0/0:11,0:7:6.49:0,6,139
chr10	37053392	.	AGAGAGAGAGAGAGC	A	2927.27	PASS	AB=1.000;AC=30;AF=0.556;AN=54;BaseQRankSum=-0.871;DP=555;FS=0.000;HRun=0;HaplotypeScore=166.4833;InbreedingCoeff=0.4765;MQ=49.12;MQ0=39;MQRankSum=-1.047;QD=8.79;ReadPosRankSum=-0.747;VQSLOD=2.5005;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:33:14.55:0,15,125	1/1:8,0:7:2.54:111,3,0	0/0:32,0:10:11.38:0,11,105	0/0:40,0:14:17.52:0,18,169	1/1:18,1:19:12.01:196,12,0	0/0:21,0:21:3:0,3,25	0/0:17,0:16:11.93:0,12,161	1/1:22,0:17:17.99:164,18,0	1/1:18,0:16:7.69:163,8,0	0/1:33,0:31:99:163,0,204	0/0:12,0:11:2.84:0,3,14	0/1:23,0:23:99:144,0,524	1/1:16,0:15:6.02:227,6,0	1/1:13,0:13:6.02:206,6,0	0/0:15,0:14:8.89:0,9,89	1/1:16,1:16:2.85:87,3,0	1/1:8,9:15:5.66:208,6,0	0/0:14,0:12:5.41:0,5,39	1/1:15,0:14:23.85:299,24,0	1/1:14,0:13:5.81:50,6,0	1/1:23,0:17:17.98:212,18,0	1/1:13,0:12:2.94:18,3,0	0/1:16,0:16:57.61:58,0,233	0/1:31,0:28:3.89:4,0,774	./.	0/0:13,0:13:27.32:0,27,421	1/1:35,0:34:19.73:802,20,0	0/0:11,0:7:14.79:0,15,148
chr10	37053394	.	AGAGAGAGAGAGC	A	2893.06	PASS	AB=0.992;AC=31;AF=0.574;AN=54;BaseQRankSum=0.627;DP=548;FS=0.000;HRun=0;HaplotypeScore=157.4416;InbreedingCoeff=0.4506;MQ=51.81;MQ0=39;MQRankSum=-1.524;QD=8.51;ReadPosRankSum=0.631;VQSLOD=2.5575;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:33:14.69:0,15,105	1/1:8,0:7:3.06:94,3,0	0/0:36,0:13:17.42:0,17,107	0/0:41,0:14:16.93:0,17,148	1/1:19,0:19:12.01:195,12,0	0/0:20,0:20:3:0,3,25	0/0:15,0:14:11.88:0,12,96	1/1:20,0:15:18:164,18,0	1/1:16,1:15:8.74:206,9,0	0/1:32,0:30:90.67:305,0,91	0/0:13,0:12:5.82:0,6,35	0/1:22,1:23:99:161,0,382	1/1:16,0:15:6.02:192,6,0	1/1:13,0:13:6.02:171,6,0	0/0:14,0:13:8.88:0,9,66	1/1:7,10:16:2.68:106,3,0	1/1:17,0:15:7.27:172,7,0	0/1:12,0:10:10.55:11,0,31	1/1:15,0:14:24.49:280,24,0	1/1:15,0:14:8.99:75,9,0	1/1:23,0:17:17.96:168,18,0	1/1:13,0:12:2.94:18,3,0	0/1:17,0:17:80.60:81,0,159	0/1:30,0:27:3.89:4,0,625	./.	0/0:12,0:12:30.02:0,30,297	1/1:33,0:32:21.84:678,22,0	0/0:11,0:7:14.77:0,15,107
chr10	37054735	.	A	AT	10970.42	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-15.429;DP=598;FS=5.561;HRun=0;HaplotypeScore=57.2325;InbreedingCoeff=0.9990;MQ=75.88;MQ0=0;MQRankSum=-0.365;QD=32.75;ReadPosRankSum=4.905;VQSLOD=4.4288;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,122,1564	1/1:0,9:9:26.98:316,27,0	0/0:21,0:18:45.82:0,46,418	0/0:20,0:16:43.63:0,44,373	1/1:1,20:21:60.19:790,60,0	0/0:23,0:23:69.18:0,69,881	0/0:23,0:23:65.74:0,66,813	1/1:1,38:39:99:1366,114,0	1/1:0,17:17:39.13:517,39,0	0/0:22,0:22:61.01:0,61,699	0/0:16,0:16:48.12:0,48,607	1/1:0,13:13:27.09:357,27,0	1/1:0,9:9:21.07:279,21,0	1/1:0,20:20:51.17:673,51,0	0/0:19,0:19:54.07:0,54,652	1/1:0,15:15:36.12:478,36,0	1/1:0,32:32:72.24:955,72,0	0/0:24,0:24:67.84:0,68,902	1/1:1,20:21:60.13:733,60,0	1/1:0,17:17:45.06:575,45,0	1/1:0,15:15:39.13:517,39,0	1/1:2,18:20:43.37:629,43,0	1/1:0,13:13:29.96:398,30,0	1/1:0,24:24:63.21:835,63,0	1/1:0,22:22:48.16:637,48,0	0/0:35,0:35:98.53:0,99,1205	1/1:2,26:28:69.21:915,69,0	0/0:16,0:16:39.42:0,39,529
chr10	37055201	.	C	CG	6316.34	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-4.440;DP=560;FS=8.437;HRun=8;HaplotypeScore=67.8199;InbreedingCoeff=0.9863;MQ=85.10;MQ0=0;MQRankSum=-5.705;QD=19.62;ReadPosRankSum=-0.016;VQSLOD=4.4434;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,2:41:61.41:0,61,816	1/1:2,10:12:30.09:345,30,0	0/0:21,0:21:47.66:0,48,415	0/0:17,0:17:36:0,36,387	1/1:12,0:20:25.70:135,26,0	0/0:17,1:17:19.38:0,19,424	0/0:31,0:31:84.02:0,84,764	1/1:2,8:11:26.88:275,27,0	1/1:6,2:17:19.92:102,20,0	0/0:26,0:26:69.02:0,69,625	0/0:8,0:8:14.95:0,15,129	1/1:3,19:22:51.15:589,51,0	1/1:3,21:24:48.14:552,48,0	1/1:4,20:24:48.14:554,48,0	0/0:18,0:18:54.03:0,54,494	1/1:4,0:19:46.93:243,47,0	1/1:8,0:24:39.89:207,40,0	0/0:17,0:17:42.02:0,42,384	1/1:3,15:18:45.02:475,45,0	1/1:6,12:18:33.09:371,33,0	1/1:12,29:40:23.40:775,23,0	1/1:2,13:15:30.09:346,30,0	1/1:4,7:11:8.75:103,9,0	1/1:3,13:16:39.12:450,39,0	1/1:2,11:13:30.09:346,30,0	0/0:28,0:28:72.03:0,72,658	1/1:1,16:17:39.12:450,39,0	0/0:12,0:13:38.06:0,38,335
chr10	37056193	.	CA	C	8935.52	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=11.152;DP=630;FS=1.784;HRun=9;HaplotypeScore=64.7834;InbreedingCoeff=0.9993;MQ=78.77;MQ0=0;MQRankSum=-0.851;QD=23.83;ReadPosRankSum=1.624;VQSLOD=5.7943;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,132,1514	1/1:2,10:12:30.02:275,30,0	0/0:22,0:22:38.92:0,39,397	0/0:13,0:13:26.54:0,27,281	1/1:2,22:24:63.03:577,63,0	0/0:18,0:18:48.14:0,48,554	0/0:20,0:20:28.02:0,28,562	1/1:2,13:15:36.01:329,36,0	1/1:1,20:21:57.03:522,57,0	0/0:36,0:37:99:0,105,1164	0/0:19,0:19:57.14:0,57,639	1/1:1,21:22:51.03:467,51,0	1/1:2,20:22:51.03:467,51,0	1/1:4,11:15:33.01:302,33,0	0/0:22,0:22:48.14:0,48,554	1/1:1,20:21:60.03:549,60,0	1/1:3,23:26:66.03:604,66,0	0/0:18,0:18:45.08:0,45,493	1/1:0,15:15:45.02:412,45,0	1/1:1,20:21:60.03:549,60,0	1/1:4,37:41:67.43:872,67,0	1/1:1,12:13:36.02:329,36,0	1/1:1,21:22:56.99:513,57,0	1/1:1,30:31:81.04:741,81,0	1/1:1,27:28:78.04:714,78,0	0/0:32,0:32:81.20:0,81,913	1/1:0,26:26:78.04:714,78,0	0/0:8,0:8:24.07:0,24,277
chr10	37056292	.	TCACA	T	747.65	PASS	AB=0.950;AC=24;AF=0.500;AN=48;BaseQRankSum=3.340;DP=558;FS=3.617;HRun=0;HaplotypeScore=90.9499;InbreedingCoeff=0.3306;MQ=69.18;MQ0=11;MQRankSum=-0.615;QD=2.61;ReadPosRankSum=0.760;VQSLOD=1.5009;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:23,7:30:3.01:46,3,0	1/1:8,0:7:7.26:67,7,0	./.	./.	1/1:18,0:18:1.55:4,2,0	0/0:18,0:17:12.04:0,12,262	0/0:22,0:22:9:0,9,107	./.	0/1:12,0:12:0:0,0,0	1/1:22,4:26:8.24:111,8,0	1/1:13,0:13:5.97:47,6,0	0/0:22,0:22:13.66:0,14,463	0/1:15,0:15:10.99:43,0,11	0/1:13,0:13:17.61:53,0,18	1/1:21,8:29:14.73:192,15,0	1/1:17,0:24:12.01:112,12,0	1/1:21,0:23:8.33:62,8,0	0/1:14,7:20:41.17:83,0,41	0/0:13,0:10:8.84:0,9,65	0/0:9,0:10:2.74:0,3,12	0/0:28,0:26:3.72:0,4,94	0/0:18,0:19:5.72:0,6,33	0/1:15,0:15:20.75:21,0,63	0/0:39,0:40:47.35:0,47,715	0/0:20,0:20:5.99:0,6,50	1/1:16,0:16:3.46:26,3,0	0/1:19,1:20:4.35:39,0,4	./.
chr10	37057505	.	AAGAG	A	2391.12	PASS	AB=1.000;AC=20;AF=0.357;AN=56;BaseQRankSum=-6.576;DP=431;FS=0.564;HRun=0;HaplotypeScore=114.3209;InbreedingCoeff=0.7239;MQ=58.50;MQ0=7;MQRankSum=0.709;QD=13.90;ReadPosRankSum=1.892;VQSLOD=3.4376;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:21:35.69:464,36,0	0/0:2,0:2:3:0,3,25	0/1:31,0:7:4.86:5,0,26	0/0:35,0:14:1.27:0,1,43	0/0:11,0:11:14.64:0,15,86	1/1:2,11:13:9.03:151,9,0	1/1:8,0:8:15.01:211,15,0	0/0:23,0:23:29.56:0,30,229	0/0:13,0:13:11.92:0,12,104	1/1:17,1:17:7.65:498,8,0	1/1:7,0:7:1.45:52,1,0	0/0:20,0:19:8.83:0,9,215	0/0:14,0:14:32.96:0,33,335	0/0:12,0:12:23.92:0,24,203	1/1:1,20:21:17.71:279,18,0	0/0:13,0:13:14.68:0,15,94	0/0:25,0:25:15.49:0,15,207	1/1:14,0:13:20.78:387,21,0	0/0:16,0:15:35.83:0,36,319	0/0:13,0:13:17.92:0,18,141	0/0:14,0:13:8.99:0,9,96	0/0:7,0:7:14.98:0,15,125	0/0:5,0:5:11.98:0,12,98	0/1:10,0:7:6.14:14,0,6	0/0:14,0:14:26.52:0,27,225	1/1:5,0:21:45.04:415,45,0	0/0:21,0:21:41.74:0,42,382	1/1:4,0:7:12.01:110,12,0
chr10	37057507	.	G	GAA	5368.23	PASS	AB=1.000;AC=31;AF=0.554;AN=56;BaseQRankSum=-4.410;DP=440;FS=6.277;HRun=3;HaplotypeScore=98.6712;InbreedingCoeff=0.8607;MQ=58.04;MQ0=10;MQRankSum=0.704;QD=23.65;ReadPosRankSum=-0.726;VQSLOD=2.6724;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:34.88:0,35,328	1/1:1,1:2:5.95:75,6,0	0/0:33,0:7:12.41:0,12,97	0/0:38,0:16:19.52:0,20,167	1/1:11,0:11:12.15:81,12,0	0/0:13,0:13:14.89:0,15,111	0/0:8,0:8:23.92:0,24,214	1/1:22,1:23:49.11:463,49,0	1/1:3,0:13:11.98:128,12,0	0/0:20,0:19:42.43:0,42,413	0/0:6,0:6:15:0,15,140	1/1:4,17:19:27.56:466,28,0	1/1:9,5:14:38.86:526,39,0	1/1:9,4:13:29.28:439,29,0	0/0:21,0:21:17.83:0,18,134	1/1:9,4:13:27.03:369,27,0	0/1:25,0:25:99:236,0,117	0/0:13,0:12:32.63:0,33,306	1/1:3,12:14:36.75:558,37,0	1/1:3,11:14:30.70:389,31,0	1/1:2,11:13:8.96:131,9,0	1/1:1,6:7:18.01:306,18,0	1/1:6,0:6:14.68:134,15,0	0/0:4,6:7:5.26:0,5,51	1/1:5,9:14:26.94:401,27,0	0/0:22,0:22:41.40:0,41,379	1/1:16,6:22:47.97:664,48,0	0/0:9,0:8:11.88:0,12,101
chr10	37057525	.	GAC	G	3771.46	PASS	AB=0.912;AC=34;AF=0.607;AN=56;BaseQRankSum=3.721;DP=436;FS=5.670;HRun=0;HaplotypeScore=105.4299;InbreedingCoeff=0.6181;MQ=49.54;MQ0=17;MQRankSum=-0.915;QD=15.46;ReadPosRankSum=0.439;VQSLOD=3.3397;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:27.29:0,27,148	1/1:3,0:3:5.98:51,6,0	0/0:41,0:2:3.27:0,3,14	0/0:38,0:10:10.52:0,11,121	0/1:14,0:14:23.67:24,0,63	0/0:19,0:19:31.95:0,32,219	0/0:9,0:9:16.86:0,17,101	1/1:9,2:11:22.91:206,23,0	1/1:9,2:11:17.90:179,18,0	0/1:22,0:21:27.88:28,0,106	0/1:4,0:4:20.69:22,0,21	1/1:18,0:17:29.80:283,30,0	1/1:8,6:14:30.54:332,31,0	0/1:5,6:11:3.70:208,0,4	0/0:22,1:23:10.12:0,10,90	1/1:7,4:12:12.03:133,12,0	0/0:17,0:17:19.32:0,19,136	0/0:15,2:16:25.58:0,26,198	1/1:18,1:16:43.48:390,43,0	1/1:14,0:14:24.07:253,24,0	1/1:11,1:11:17.35:149,17,0	1/1:9,0:9:24.47:220,24,0	1/1:5,0:5:5.70:49,6,0	0/0:10,0:7:3.89:0,4,30	1/1:11,4:15:32.20:313,32,0	1/1:19,0:19:52.37:414,52,0	1/1:10,11:21:38.11:410,38,0	1/1:9,0:9:13.88:109,14,0
chr10	37057527	.	CAAAGAAAGAAAG	C	959.22	PASS	AB=0.915;AC=4;AF=0.077;AN=52;BaseQRankSum=1.197;DP=435;FS=3.650;HRun=0;HaplotypeScore=170.6025;InbreedingCoeff=0.0287;MQ=49.65;MQ0=17;MQRankSum=-5.283;QD=12.79;ReadPosRankSum=2.656;VQSLOD=2.7433;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:23.57:0,24,457	0/0:4,0:4:11.93:0,12,249	./.	0/1:35,0:10:0.27:0,0,1	0/0:13,0:13:21.61:0,22,209	0/0:20,0:20:27.09:0,27,1287	0/0:9,0:9:12.01:0,12,196	0/0:13,0:13:8.06:0,8,143	0/1:11,0:11:6.32:6,0,262	0/0:24,0:23:54.16:0,54,2049	0/0:4,0:4:9.03:0,9,341	0/0:19,0:17:15.01:0,15,313	0/0:14,0:14:27.09:0,27,711	0/0:11,0:11:11.97:0,12,275	0/0:22,0:22:6.49:0,6,287	0/0:11,0:11:3.01:0,3,38	0/0:16,0:16:18.01:0,18,422	0/0:16,0:15:30.10:0,30,1137	0/0:20,0:17:24.08:0,24,464	0/0:13,0:13:15.02:0,15,281	0/0:12,0:11:18.03:0,18,268	0/0:9,0:9:18.01:0,18,256	0/0:5,0:5:5.99:0,6,82	./.	0/0:15,0:15:23.24:0,23,346	0/1:13,6:19:96.74:851,0,97	0/0:21,0:21:18.53:0,19,523	0/1:8,1:9:42.66:194,0,43
chr10	37057573	.	AAGAG	A	6607.92	PASS	AB=1.000;AC=41;AF=0.732;AN=56;BaseQRankSum=-1.245;DP=511;FS=13.850;HRun=0;HaplotypeScore=130.3538;InbreedingCoeff=0.3364;MQ=64.93;MQ0=10;MQRankSum=0.487;QD=15.16;ReadPosRankSum=-0.088;VQSLOD=3.6635;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,21:24:5.97:71,6,0	0/1:11,0:11:16.91:171,0,17	0/0:19,0:10:23.59:0,24,206	0/0:18,0:10:7.48:0,7,96	1/1:17,0:17:41.78:376,42,0	0/1:21,0:21:99:189,0,304	1/1:0,18:18:5.93:69,6,0	1/1:29,0:26:68.55:580,69,0	1/1:12,0:12:29.72:267,30,0	0/1:33,0:32:99:288,0,204	0/1:6,0:6:32.86:75,0,33	0/1:17,0:15:0.01:237,0,0	1/1:21,0:21:49.19:467,49,0	1/1:13,0:13:26.31:243,26,0	0/1:23,0:23:54.68:146,0,55	1/1:17,0:17:39:353,39,0	1/1:32,0:32:54.01:426,54,0	0/1:19,0:18:99:170,0,178	1/1:19,0:18:45.02:459,45,0	1/1:14,0:14:36.05:388,36,0	1/1:17,0:16:19.35:345,19,0	1/1:9,0:9:24.03:269,24,0	1/1:7,0:7:11.21:112,11,0	1/1:10,0:7:14.82:104,15,0	1/1:18,0:18:35.38:348,35,0	0/0:24,0:23:12.67:0,13,321	1/1:29,0:29:53.48:454,53,0	0/0:14,0:13:20.89:0,21,174
chr10	37057584	.	AGAG	A	2074.15	PASS	AB=0.981;AC=29;AF=0.518;AN=56;BaseQRankSum=6.271;DP=513;FS=10.209;HRun=0;HaplotypeScore=134.2349;InbreedingCoeff=0.3800;MQ=72.29;MQ0=7;MQRankSum=2.223;QD=6.42;ReadPosRankSum=4.248;VQSLOD=2.2694;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:22:26.05:26,0,27	0/1:13,0:13:47.36:47,0,105	0/0:26,0:17:45.14:0,45,728	0/0:24,0:16:30.90:0,31,373	1/1:12,4:16:13.71:139,14,0	0/0:27,0:27:67.09:0,67,899	0/1:21,0:21:18.11:18,0,92	1/1:31,0:30:5.28:188,5,0	0/1:10,2:12:1.23:71,0,1	0/0:33,0:32:78.71:0,79,764	0/0:7,0:7:18.67:0,19,139	0/1:16,0:15:19.62:86,0,20	1/1:17,0:17:30.67:212,31,0	1/1:11,0:11:24.63:111,25,0	0/0:22,0:22:37.80:0,38,372	1/1:14,1:15:25.85:152,26,0	0/1:30,1:31:27.01:85,0,27	0/0:18,0:17:47.49:0,47,591	1/1:18,0:18:20.92:215,21,0	1/1:12,0:12:33.66:208,34,0	0/1:18,0:17:17.03:142,0,17	0/1:12,0:12:2.05:132,0,2	0/1:10,0:10:39.29:54,0,39	1/1:9,0:6:5.49:34,5,0	1/1:14,1:15:27.12:187,27,0	0/0:24,0:23:68.83:0,69,1095	1/1:24,0:24:30.65:163,31,0	0/0:9,0:9:24.08:0,24,447
chr10	37058773	.	G	GTT	1011.20	PASS	AB=0.714;AC=5;AF=0.089;AN=56;BaseQRankSum=7.965;DP=655;FS=5.495;HRun=0;HaplotypeScore=105.6191;InbreedingCoeff=0.7788;MQ=69.74;MQ0=5;MQRankSum=-7.043;QD=22.98;ReadPosRankSum=-0.552;VQSLOD=4.1550;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:87.29:0,87,1382	0/0:15,0:15:42.13:0,42,661	0/0:42,0:23:44.06:0,44,561	0/0:38,0:21:36.84:0,37,365	0/0:39,0:39:99:0,111,1734	0/0:19,0:19:57.19:0,57,922	0/0:21,0:21:28.81:0,29,819	0/0:36,0:36:99:0,103,1589	0/0:25,0:25:75.26:0,75,1208	0/0:25,0:25:75.19:0,75,1064	0/0:22,0:22:66.22:0,66,1032	1/1:4,6:10:24.54:337,25,0	0/0:20,0:20:60.20:0,60,947	0/0:23,0:23:69.19:0,69,1045	0/0:19,0:19:57.19:0,57,899	0/0:24,0:24:72.24:0,72,1133	0/0:19,0:19:57.18:0,57,892	0/0:22,0:23:68.40:0,68,1035	0/0:23,0:23:66.23:0,66,1063	0/0:20,0:20:57.18:0,57,900	0/0:20,0:20:60.20:0,60,975	0/0:16,0:16:48.16:0,48,769	1/1:5,12:18:39.86:525,40,0	0/1:9,5:15:63.59:279,0,64	0/0:20,0:20:60.20:0,60,965	0/0:39,0:39:99:0,117,1843	0/0:22,0:22:66.20:0,66,1015	0/0:9,0:9:27.08:0,27,395
chr10	37058795	.	C	CT	442.65	PASS	AB=0.819;AC=6;AF=0.107;AN=56;BaseQRankSum=0.767;DP=660;FS=7.545;HRun=10;HaplotypeScore=90.7383;InbreedingCoeff=0.6073;MQ=69.06;MQ0=3;MQRankSum=-1.078;QD=7.50;ReadPosRankSum=-2.399;VQSLOD=1.5601;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:62.90:0,63,514	0/1:11,1:12:5.03:5,0,170	0/0:35,0:19:32.30:0,32,235	0/0:41,0:25:4.99:0,5,144	0/0:34,0:34:49.82:0,50,566	0/0:20,0:20:44.92:0,45,369	0/0:21,1:24:34.99:0,35,469	0/0:38,0:38:83.83:0,84,678	0/0:24,0:24:59.88:0,60,491	0/0:23,0:23:62.92:0,63,517	0/0:24,0:25:71.91:0,72,591	1/1:7,6:12:21.04:216,21,0	0/0:21,0:21:47.91:0,48,394	0/0:18,1:19:15.91:0,16,337	0/0:17,0:18:46.97:0,47,372	0/0:25,0:25:42.80:0,43,515	0/0:14,0:16:46:0,46,353	0/0:26,0:27:76.88:0,77,611	0/0:28,0:28:68.90:0,69,567	0/0:26,0:26:62.83:0,63,514	0/0:20,0:20:56.88:0,57,460	0/0:18,1:19:9.92:0,10,287	1/1:11,7:19:22.82:216,23,0	0/1:9,6:15:28.14:137,0,28	0/0:14,0:15:43.95:0,44,345	0/0:37,0:37:74.85:0,75,613	0/0:29,0:29:71.81:0,72,580	0/0:8,0:8:20.94:0,21,166
chr10	37058893	.	TAAC	T	2002.15	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=6.995;DP=575;FS=1.955;HRun=0;HaplotypeScore=90.7432;InbreedingCoeff=0.9993;MQ=79.66;MQ0=0;MQRankSum=-4.553;QD=40.86;ReadPosRankSum=0.749;VQSLOD=4.3012;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:66.23:0,66,1519	0/0:9,0:9:27.09:0,27,623	0/0:16,0:16:36.98:0,37,877	0/0:18,0:17:51.10:0,51,985	0/0:30,0:30:87.27:0,87,1916	0/0:24,0:24:69.24:0,69,1579	0/0:20,0:20:60.21:0,60,1382	0/0:30,0:30:87.30:0,87,1998	0/0:26,0:26:72.25:0,72,1613	0/0:26,0:26:78.27:0,78,1796	0/0:15,0:15:42.14:0,42,967	1/1:1,12:13:36.12:611,36,0	0/0:16,0:16:45.15:0,45,998	0/0:20,0:20:51.65:0,52,1176	0/0:19,0:19:48.16:0,48,1107	0/0:26,0:26:75.26:0,75,1714	0/0:21,0:21:54.18:0,54,1220	0/0:13,0:13:33.11:0,33,753	0/0:14,0:14:42.14:0,42,988	0/0:18,0:18:51.17:0,51,1153	0/0:31,0:31:87.30:0,87,1993	0/0:18,0:18:51.17:0,51,1162	1/1:1,19:20:60.17:971,60,0	1/1:0,16:16:33.11:563,33,0	0/0:19,0:19:51.18:0,51,1164	0/0:30,0:30:90.30:0,90,2023	0/0:29,0:29:75.73:0,76,1729	0/0:12,0:12:36.12:0,36,827
chr10	37058968	.	T	TTGTGTGTG	4320.63	PASS	AB=0.916;AC=35;AF=0.673;AN=52;BaseQRankSum=-0.926;DP=514;FS=7.354;HRun=0;HaplotypeScore=138.8338;InbreedingCoeff=0.4326;MQ=65.13;MQ0=4;MQRankSum=-4.724;QD=11.84;ReadPosRankSum=1.363;VQSLOD=3.3640;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:7,9:16:2.19:0,2,10	1/1:5,0:5:4.52:23,5,0	0/0:23,0:17:29.79:0,30,593	0/0:31,0:27:16.32:0,16,843	1/1:26,0:27:5.37:96,5,0	1/1:3,8:12:3.01:48,3,0	1/1:8,11:17:3.01:74,3,0	1/1:27,0:27:43.02:797,43,0	0/0:29,0:29:0.29:0,0,2	1/1:11,13:24:39.12:1161,39,0	0/1:3,8:11:0:0,0,0	1/1:14,0:21:11.88:446,12,0	1/1:17,0:17:6.32:111,6,0	0/1:19,0:19:0.18:0,0,1	./.	1/1:21,0:21:21.23:369,21,0	1/1:15,0:16:1.82:5,2,0	1/1:6,5:12:9.03:259,9,0	1/1:17,0:16:24.01:464,24,0	0/1:18,0:18:22.60:23,0,70	0/1:21,0:21:0:0,0,0	./.	1/1:9,0:10:3.01:98,3,0	1/1:12,0:12:4.73:102,5,0	0/0:13,0:13:0.93:0,1,1	0/1:29,0:27:19.92:20,0,1247	1/1:25,0:26:9.03:225,9,0	0/0:9,0:9:24.08:0,24,549
chr10	37058979	.	T	TGTGTGTGC	5040.24	PASS	AB=0.891;AC=35;AF=0.673;AN=52;BaseQRankSum=0.367;DP=528;FS=9.776;HRun=0;HaplotypeScore=134.1326;InbreedingCoeff=0.3438;MQ=56.32;MQ0=5;MQRankSum=-5.943;QD=12.76;ReadPosRankSum=1.670;VQSLOD=2.8348;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:13,0:13:0:0,0,0	1/1:2,6:9:4.56:32,5,0	0/0:23,0:16:29.83:0,30,640	0/0:30,0:23:29.49:0,29,980	1/1:21,5:26:5.37:121,5,0	1/1:12,0:12:5.60:40,6,0	0/1:18,0:15:8.63:101,0,9	1/1:28,0:28:57.05:1150,57,0	1/1:28,0:28:1.64:65,2,0	1/1:17,0:17:39.10:882,39,0	0/1:11,0:11:0:0,0,0	0/1:22,0:22:6.12:267,0,6	0/1:7,10:19:9.38:124,0,9	1/1:20,0:21:0.20:0,0,0	./.	1/1:22,2:24:24.19:512,24,0	1/1:12,0:12:7.58:109,8,0	1/1:10,0:10:15.05:352,15,0	1/1:7,0:18:19.29:754,19,0	0/1:20,0:20:67.93:71,0,68	0/1:13,11:32:10.51:70,0,11	./.	1/1:8,0:8:3.01:73,3,0	1/1:15,0:15:4.42:77,4,0	0/0:12,0:12:0.94:0,1,2	0/0:29,0:27:23.40:0,23,1568	1/1:31,0:30:9.85:240,10,0	0/0:8,0:8:24.08:0,24,566
chr10	37058981	.	T	TGTGTGCGTGAGAGAGA	7206.97	PASS	AB=0.735;AC=37;AF=0.685;AN=54;BaseQRankSum=-0.286;DP=569;FS=1.858;HRun=0;HaplotypeScore=182.1206;InbreedingCoeff=0.4050;MQ=51.60;MQ0=6;MQRankSum=-6.627;QD=16.49;ReadPosRankSum=0.213;VQSLOD=4.0260;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:14:3.01:72,3,0	1/1:9,0:9:4.25:32,4,0	0/0:18,0:11:29.83:0,30,640	0/0:30,0:22:32.49:0,32,1031	1/1:19,0:26:11.58:256,12,0	1/1:13,0:13:3.89:31,4,0	0/1:25,0:22:4.14:245,0,4	1/1:27,0:27:46.80:1294,47,0	1/1:6,16:33:6.26:144,6,0	1/1:19,0:20:51.16:1453,51,0	0/0:14,0:14:0.30:0,0,0	1/1:19,0:22:5.40:685,5,0	1/1:19,0:19:9.49:143,9,0	0/1:2,0:25:0.03:0,0,0	1/1:18,0:18:2.86:25,3,0	1/1:17,0:28:26.54:586,27,0	1/1:5,6:15:7.58:108,8,0	1/1:14,0:14:30.99:913,31,0	1/1:17,0:16:38.79:747,39,0	0/1:6,0:20:40.05:40,0,185	0/1:32,0:32:87.25:87,0,135	./.	1/1:7,0:8:5.61:122,6,0	1/1:16,0:17:12.93:148,13,0	0/0:3,0:15:0.72:0,1,1	0/0:29,0:28:25.68:0,26,1987	0/1:8,0:34:75.24:75,0,88	0/0:3,0:8:24.08:0,24,845
chr10	37059591	.	A	AGACTCACG	21872.80	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-4.371;DP=562;FS=7.329;HRun=0;HaplotypeScore=148.0865;InbreedingCoeff=0.9931;MQ=83.67;MQ0=0;MQRankSum=-16.202;QD=84.45;ReadPosRankSum=-3.274;VQSLOD=4.2376;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,99,2778	1/1:1,3:7:17.76:753,18,0	0/0:26,0:26:69.23:0,69,1790	0/0:17,0:17:48.16:0,48,1185	1/1:6,9:20:11.88:485,12,0	0/0:27,0:27:81.28:0,81,2250	0/0:40,0:40:99:0,117,3278	1/1:14,7:24:69.22:2535,69,0	1/1:3,15:20:45.13:1837,45,0	0/0:16,0:16:45.15:0,45,1291	0/0:10,0:10:30.10:0,30,791	0/0:21,0:21:57.20:0,57,1634	1/1:1,5:6:18.06:786,18,0	1/1:8,8:21:45.15:1944,45,0	0/0:15,0:15:45.14:0,45,1230	1/1:5,11:16:45.15:1896,45,0	1/1:8,11:20:36.12:1541,36,0	0/0:25,0:25:66.23:0,66,1875	1/1:8,8:22:63.16:1986,63,0	1/1:7,6:17:35.58:1232,36,0	1/1:11,7:23:30.10:1277,30,0	1/1:6,11:19:33.11:1441,33,0	0/0:13,0:13:36.12:0,36,1031	0/0:28,0:28:81.28:0,81,2265	1/1:8,9:20:39.13:1647,39,0	0/0:15,0:15:45.15:0,45,1292	1/1:6,14:23:60.21:2512,60,0	0/0:14,0:14:33.11:0,33,947
chr10	37060091	.	CTGCGCGACTGTCTG	C	2043.72	PASS	AC=14;AF=0.280;AN=50;BaseQRankSum=1.036;DP=537;FS=10.110;HRun=0;HaplotypeScore=205.3412;InbreedingCoeff=0.9294;MQ=77.36;MQ0=0;MQRankSum=-4.856;QD=23.49;ReadPosRankSum=-1.932;VQSLOD=1.1244;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:72.15:0,72,1560	1/1:8,0:8:9.03:237,9,0	0/0:17,0:17:21.04:0,21,333	0/0:14,0:15:26.11:0,26,380	0/0:13,0:13:33.10:0,33,761	0/0:21,0:21:41.45:0,41,994	0/0:43,0:43:99:0,99,2623	1/1:2,7:9:21:541,21,0	0/0:18,0:18:41.87:0,42,1065	0/0:15,0:15:36.12:0,36,935	0/0:7,0:7:18.06:0,18,474	0/0:24,0:24:57.20:0,57,1897	1/1:8,0:8:6.02:150,6,0	1/1:13,0:13:9.03:274,9,0	0/0:35,0:35:75.26:0,75,2367	0/0:21,0:21:32.60:0,33,1116	0/0:43,0:43:69.78:0,70,1861	0/0:45,0:45:49.80:0,50,3209	1/1:2,7:9:20.98:390,21,0	./.	1/1:27,0:27:9:140,9,0	./.	0/0:9,0:9:27.04:0,27,590	0/0:51,0:51:99:0,115,4269	./.	0/0:17,0:17:36.12:0,36,916	1/1:13,0:13:20.94:490,21,0	0/0:3,0:3:9.03:0,9,229
chr10	37060103	.	C	CAG	987.52	PASS	AB=0.849;AC=16;AF=0.320;AN=50;BaseQRankSum=9.471;DP=539;FS=3.317;HRun=0;HaplotypeScore=104.9972;InbreedingCoeff=0.7163;MQ=69.01;MQ0=0;MQRankSum=-5.122;QD=6.33;ReadPosRankSum=-3.212;VQSLOD=2.7644;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:32:74.99:0,75,1035	1/1:2,5:7:8.96:97,9,0	0/0:12,0:11:32.66:0,33,410	0/0:15,0:12:24.37:0,24,358	0/0:11,0:11:33.07:0,33,466	0/0:19,0:19:44.44:0,44,683	0/0:56,0:52:99:0,138,2063	1/1:7,0:7:21:237,21,0	0/0:16,0:16:41.79:0,42,657	0/0:16,0:16:45.01:0,45,709	0/0:6,0:6:18.06:0,18,293	0/1:28,3:31:14.14:14,0,901	1/1:4,3:7:5.96:53,6,0	1/1:2,6:8:9.02:102,9,0	0/0:36,4:40:30.88:0,31,1232	0/0:18,0:18:47.84:0,48,758	0/0:36,0:36:96.27:0,96,1501	0/1:40,15:55:99:169,0,1657	1/1:7,0:7:20.98:207,21,0	./.	1/1:11,10:21:9:80,9,0	./.	0/0:10,0:10:30.05:0,30,436	0/0:45,9:54:1.45:0,1,1714	./.	0/0:15,1:16:12.07:0,12,649	1/1:4,9:13:20.89:208,21,0	0/0:4,0:4:11.97:0,12,164
chr10	37060104	.	T	TCA	765.44	PASS	AB=0.821;AC=11;AF=0.220;AN=50;BaseQRankSum=8.143;DP=540;FS=4.293;HRun=0;HaplotypeScore=107.8944;InbreedingCoeff=0.2249;MQ=68.12;MQ0=1;MQRankSum=-4.766;QD=4.16;ReadPosRankSum=-5.107;VQSLOD=0.4220;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:30:47.06:0,47,980	0/1:2,5:7:11.98:69,0,12	0/0:12,0:11:33.07:0,33,453	0/0:13,0:11:29.41:0,29,363	0/0:11,0:11:33.11:0,33,532	0/0:19,0:19:44.62:0,45,682	0/1:58,0:54:3.27:3,0,1853	0/1:7,0:7:20.79:174,0,21	0/0:16,0:16:41.90:0,42,682	0/0:17,0:17:20.16:0,20,704	0/0:6,0:6:18.06:0,18,293	0/0:28,3:31:16.33:0,16,925	0/1:4,3:7:0.85:29,0,1	1/1:2,6:8:8.86:91,9,0	0/0:36,4:40:30.58:0,31,1262	0/0:18,0:18:47.84:0,48,758	0/0:35,0:35:93.32:0,93,1508	0/1:41,15:56:99:204,0,1650	0/1:7,0:7:41.27:97,0,41	./.	0/1:11,10:21:21.50:22,0,30	./.	0/0:11,0:10:27.08:0,27,416	0/0:45,9:54:1.41:0,1,1717	./.	0/0:15,1:16:12.09:0,12,691	1/1:4,9:13:17:223,17,0	0/0:4,0:4:7.88:0,8,144
chr10	37060207	.	T	TGC	6858.02	PASS	AB=1.000;AC=28;AF=0.500;AN=56;BaseQRankSum=14.168;DP=574;FS=8.787;HRun=0;HaplotypeScore=128.8426;InbreedingCoeff=0.8298;MQ=69.28;MQ0=0;MQRankSum=0.051;QD=23.90;ReadPosRankSum=3.080;VQSLOD=5.2117;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:75.16:0,75,898	1/1:10,0:10:24.05:246,24,0	0/1:8,0:8:1.15:1,0,6	0/0:12,0:11:3.44:0,3,22	1/1:3,16:19:33.11:554,33,0	0/0:16,0:16:36.08:0,36,432	0/0:49,0:49:99:0,105,1308	1/1:16,0:16:0.98:125,1,0	1/1:8,16:24:12.59:765,13,0	0/0:21,0:21:54.14:0,54,647	0/0:7,0:7:18.05:0,18,218	0/0:20,0:20:54.16:0,54,680	1/1:10,0:10:4.11:206,4,0	1/1:26,0:26:56.95:655,57,0	0/0:17,0:17:36.12:0,36,462	1/1:5,6:11:21.07:344,21,0	1/1:11,22:33:78.18:1206,78,0	0/0:31,0:31:75.23:0,75,947	0/1:27,0:27:4.73:419,0,5	1/1:12,0:12:24.05:253,24,0	1/1:28,0:28:34.48:418,34,0	1/1:21,0:21:43:446,43,0	0/0:13,0:13:30.07:0,30,357	0/0:40,0:40:92.82:0,93,1112	1/1:23,0:23:63.10:634,63,0	0/0:23,0:23:54.16:0,54,671	1/1:19,0:19:57.12:588,57,0	0/0:6,0:6:18.06:0,18,232
chr10	37060216	.	G	GCA	9001.24	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=11.371;DP=557;FS=10.993;HRun=0;HaplotypeScore=113.6857;InbreedingCoeff=0.9347;MQ=65.42;MQ0=0;MQRankSum=-0.472;QD=32.26;ReadPosRankSum=4.482;VQSLOD=6.8440;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:95.98:0,96,1111	1/1:2,8:10:24.08:424,24,0	0/0:6,0:6:2.59:0,3,10	0/0:8,0:8:9.15:0,9,65	1/1:17,0:17:33.05:323,33,0	0/0:15,0:15:36.06:0,36,453	0/0:42,0:42:99:0,108,1389	1/1:6,8:15:27.06:401,27,0	1/1:23,0:23:9.96:429,10,0	0/0:21,0:21:57.09:0,57,723	0/0:6,0:6:18.06:0,18,243	0/0:23,0:23:59.73:0,60,750	1/1:5,8:13:21.07:371,21,0	1/1:7,21:28:60.03:1128,60,0	0/0:14,0:14:39.07:0,39,496	1/1:11,0:11:3.03:163,3,0	1/1:32,0:32:53.24:595,53,0	0/0:31,0:31:78.11:0,78,972	1/1:4,20:24:60.17:977,60,0	1/1:3,9:12:30.08:474,30,0	1/1:10,16:26:40.44:758,40,0	1/1:2,20:22:43.08:793,43,0	0/0:13,0:13:30.10:0,30,401	0/0:36,0:36:83.85:0,84,1106	1/1:4,21:25:63.22:1110,63,0	0/0:21,0:21:57.16:0,57,744	1/1:3,18:21:63.18:1056,63,0	0/0:6,0:6:18.06:0,18,246
chr10	37060307	.	A	AG	10731.06	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-11.387;DP=582;FS=6.085;HRun=3;HaplotypeScore=63.1534;InbreedingCoeff=0.9975;MQ=75.47;MQ0=0;MQRankSum=-2.623;QD=38.74;ReadPosRankSum=1.440;VQSLOD=5.0977;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:60,0:60:99:0,168,2128	1/1:0,11:11:24.08:360,24,0	0/0:12,0:12:15.92:0,16,242	0/0:28,0:28:63.22:0,63,663	1/1:0,14:14:39.13:584,39,0	0/0:15,0:15:45.13:0,45,569	0/0:26,0:26:75.19:0,75,926	1/1:1,18:19:41.93:585,42,0	1/1:0,16:16:42.14:614,42,0	0/0:15,0:15:42.13:0,42,533	0/0:9,0:9:27.09:0,27,350	0/0:22,0:22:60.18:0,60,760	1/1:0,15:15:39.13:584,39,0	1/1:0,20:20:54.18:809,54,0	0/0:12,0:12:33.11:0,33,428	1/1:0,15:15:42.14:627,42,0	1/1:2,25:26:78.26:1167,78,0	0/0:45,0:45:99:0,132,1697	1/1:4,19:23:63.21:938,63,0	1/1:0,18:18:45.14:635,45,0	1/1:2,36:38:90.30:1348,90,0	1/1:4,9:13:33.10:462,33,0	0/0:9,0:9:27.09:0,27,350	0/0:24,0:24:69.11:0,69,840	1/1:0,31:31:87.29:1299,87,0	0/0:12,0:12:36.12:0,36,465	1/1:1,16:17:48.16:719,48,0	0/0:16,0:16:45.15:0,45,584
chr10	37060911	.	G	GATGT	6907.63	PASS	AB=0.870;AC=36;AF=0.667;AN=54;BaseQRankSum=-6.194;DP=457;FS=13.778;HRun=0;HaplotypeScore=106.4917;InbreedingCoeff=0.6917;MQ=58.99;MQ0=1;MQRankSum=1.469;QD=24.76;ReadPosRankSum=-0.176;VQSLOD=3.8653;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:21.07:0,21,324	1/1:10,1:11:12.04:234,12,0	./.	0/0:19,0:14:3:0,3,46	1/1:15,7:22:27.09:550,27,0	0/0:21,0:21:15.01:0,15,206	0/0:13,0:13:9.03:0,9,140	1/1:20,0:20:6.02:113,6,0	1/1:12,7:19:36.12:784,36,0	0/0:26,0:26:45.15:0,45,674	0/1:11,0:11:20.85:21,0,324	1/1:7,0:9:9.03:152,9,0	1/1:4,8:12:18.06:423,18,0	1/1:4,1:5:9.03:190,9,0	0/0:15,0:15:18.06:0,18,279	1/1:10,6:16:33.10:707,33,0	1/1:10,6:16:15.05:353,15,0	1/1:8,2:10:6.02:141,6,0	1/1:8,3:11:9.03:212,9,0	0/1:11,6:17:19.47:469,0,19	1/1:16,4:20:30.05:582,30,0	1/1:8,4:12:9.03:212,9,0	1/1:18,0:24:26.11:384,26,0	1/1:8,0:10:3.01:52,3,0	1/1:11,8:19:33.09:726,33,0	0/0:7,0:15:26.71:0,27,234	1/1:12,3:15:27.09:603,27,0	0/0:6,0:16:24.03:0,24,224
chr10	37060953	.	T	TG	940.58	PASS	AB=0.884;AC=15;AF=0.268;AN=56;BaseQRankSum=-0.029;DP=407;FS=7.206;HRun=0;HaplotypeScore=170.1624;InbreedingCoeff=-0.3714;MQ=56.66;MQ0=5;MQRankSum=1.094;QD=4.16;ReadPosRankSum=0.251;VQSLOD=2.8528;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:30.22:0,30,376	0/1:1,5:6:8.74:153,0,9	0/0:16,0:9:27.05:0,27,336	0/0:10,0:6:8.53:0,9,124	0/1:33,2:35:64.61:65,0,354	0/0:17,0:17:21.93:0,22,266	0/0:10,0:10:23.91:0,24,247	0/1:15,1:16:44.83:45,0,539	0/1:16,1:18:99:117,0,131	0/0:23,0:23:69.19:0,69,937	0/1:22,1:23:6.03:6,0,376	0/1:11,2:13:39.34:39,0,45	0/1:9,0:9:9.22:9,0,69	0/1:4,1:5:16.44:16,0,66	0/0:18,0:18:24.54:0,25,307	0/1:14,1:15:34.14:34,0,139	0/0:13,0:13:1.37:0,1,152	0/0:9,1:10:3.74:0,4,229	0/0:18,0:16:27.53:0,28,439	0/1:13,2:15:78.29:78,0,256	0/1:9,4:13:92.53:217,0,93	0/1:4,0:4:4.50:5,0,34	0/1:27,1:28:50.54:110,0,51	0/0:6,0:6:1.27:0,1,17	0/1:16,0:16:28.46:28,0,177	0/0:13,0:13:38.94:0,39,373	0/1:6,4:10:99:166,0,100	0/0:11,0:11:26.92:0,27,224
chr10	37060972	.	T	TTTA	8309.48	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=8.180;DP=353;FS=86.508;HRun=0;HaplotypeScore=181.6868;InbreedingCoeff=0.8495;MQ=58.67;MQ0=0;MQRankSum=-11.073;QD=46.95;ReadPosRankSum=-2.369;VQSLOD=1.2929;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,14:20:31.95:597,32,0	0/0:1,0:1:3.01:0,3,44	0/1:10,0:9:3.87:4,0,152	0/0:4,0:4:6.02:0,6,99	0/0:32,0:32:72.72:0,73,1019	1/1:1,17:18:54.18:1146,54,0	1/1:5,5:10:30.02:505,30,0	0/0:20,0:20:60.18:0,60,874	0/0:13,0:13:36.11:0,36,497	1/1:11,14:25:70.81:1201,71,0	1/1:1,18:19:51.04:1033,51,0	1/1:1,11:12:27.09:553,27,0	0/0:6,0:6:15.05:0,15,225	0/0:4,0:4:12.04:0,12,178	1/1:4,16:21:63.13:1212,63,0	0/0:14,0:14:39.13:0,39,570	0/0:12,0:12:27.09:0,27,372	1/1:3,5:8:1.85:274,2,0	0/0:9,0:9:21.07:0,21,304	0/0:11,0:11:33.11:0,33,509	0/0:7,0:7:21.07:0,21,320	0/0:2,0:2:6.02:0,6,94	1/1:5,21:27:74.63:1488,75,0	1/1:3,4:7:18.06:297,18,0	0/0:13,0:13:39.13:0,39,608	0/0:12,0:12:33.10:0,33,524	0/0:6,0:6:18.06:0,18,264	0/0:10,0:10:30.09:0,30,460
chr10	37060976	.	A	AT	5728.97	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=2.192;DP=351;FS=24.640;HRun=7;HaplotypeScore=161.3152;InbreedingCoeff=0.7800;MQ=58.47;MQ0=1;MQRankSum=-4.402;QD=18.25;ReadPosRankSum=-1.213;VQSLOD=2.6498;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:19:23.51:152,24,0	1/1:0,1:1:3.01:33,3,0	0/0:10,0:9:11.94:0,12,96	0/0:6,0:5:6.01:0,6,62	1/1:3,29:32:41.86:435,42,0	1/1:18,0:18:51.13:393,51,0	1/1:10,0:10:20.88:167,21,0	1/1:1,19:20:57.18:716,57,0	1/1:1,10:11:30.05:351,30,0	1/1:24,0:24:62.98:551,63,0	1/1:20,0:20:25.22:175,25,0	1/1:12,0:12:17.83:129,18,0	1/1:2,3:5:12.02:134,12,0	1/1:1,3:4:6.02:75,6,0	1/1:21,0:21:53.37:370,53,0	1/1:4,10:14:26.98:288,27,0	1/1:3,9:12:32.80:338,33,0	1/1:8,0:8:15.01:141,15,0	1/1:7,3:10:15.03:166,15,0	1/1:2,9:11:18.06:226,18,0	1/1:3,4:7:12.04:151,12,0	1/1:1,1:2:3.01:38,3,0	1/1:27,1:28:41.66:274,42,0	1/1:7,0:7:5.93:47,6,0	1/1:4,9:13:21.07:264,21,0	0/0:11,0:11:27.06:0,27,275	1/1:1,4:5:9.03:113,9,0	0/0:10,0:10:24.05:0,24,242
chr10	37060977	.	T	TG	5057.27	PASS	AB=0.965;AC=37;AF=0.661;AN=56;BaseQRankSum=3.397;DP=351;FS=51.704;HRun=0;HaplotypeScore=163.6221;InbreedingCoeff=0.0753;MQ=58.27;MQ0=1;MQRankSum=-5.400;QD=16.11;ReadPosRankSum=7.341;VQSLOD=3.2697;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,16:19:1.49:271,1,0	1/1:1,0:1:2.80:13,3,0	0/0:10,0:9:17.98:0,18,171	0/0:6,0:5:6.01:0,6,70	0/1:32,0:32:67.60:68,0,144	1/1:1,17:18:54.16:714,54,0	0/1:5,8:13:0:273,0,0	1/1:20,0:20:23.79:149,24,0	1/1:11,0:11:1.48:100,1,0	1/1:3,21:24:13.06:884,13,0	1/1:2,18:20:40.94:351,41,0	1/1:1,11:12:19.10:262,19,0	0/1:5,0:5:17.10:21,0,17	0/1:4,0:4:9.26:9,0,34	1/1:1,20:21:51.80:701,52,0	0/1:14,0:14:39.08:39,0,67	1/1:12,0:12:15.35:96,15,0	1/1:3,5:8:9.57:188,10,0	0/1:9,0:9:21.99:22,0,39	0/1:10,0:10:36.57:37,0,52	0/1:6,0:6:26.29:26,0,35	0/1:2,0:2:5.11:5,0,14	1/1:3,25:28:68.42:674,68,0	1/1:1,6:7:3.80:87,4,0	0/1:13,0:13:33.10:33,0,105	0/0:11,0:11:33.10:0,33,433	0/1:5,0:5:31.27:34,0,31	0/0:10,0:10:30.08:0,30,389
chr10	37061074	.	T	TCA	900.30	PASS	AB=1.000;AC=13;AF=0.260;AN=50;BaseQRankSum=7.561;DP=279;FS=30.824;HRun=0;HaplotypeScore=83.7152;InbreedingCoeff=0.7107;MQ=75.35;MQ0=0;MQRankSum=-5.430;QD=10.12;ReadPosRankSum=3.672;VQSLOD=1.7339;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:17:5.99:50,6,0	0/0:5,0:5:12.04:0,12,187	0/0:15,0:10:19.74:0,20,228	0/0:27,0:17:24.58:0,25,218	0/0:18,0:18:21.02:0,21,281	1/1:9,0:9:9.01:108,9,0	1/1:8,0:8:6.02:72,6,0	0/0:10,0:10:27.08:0,27,397	0/0:8,0:8:9.01:0,9,115	1/1:1,25:26:59.94:680,60,0	./.	1/1:10,0:10:3:25,3,0	0/0:2,0:2:6.01:0,6,72	0/0:1,0:1:3.01:0,3,47	./.	0/0:16,0:16:18.06:0,18,279	0/0:10,0:10:15.03:0,15,184	1/1:10,0:10:9.03:119,9,0	0/0:7,0:7:21.07:0,21,335	0/0:3,0:3:9.03:0,9,140	0/0:11,0:11:30.09:0,30,419	0/0:4,0:4:12:0,12,122	./.	0/1:9,0:9:0:0,0,0	0/0:1,0:1:3.01:0,3,47	0/0:6,0:6:18.05:0,18,252	0/0:2,0:2:6:0,6,70	0/0:4,0:4:12.04:0,12,185
chr10	37061556	.	AG	A	2247.67	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.001;DP=617;FS=0.509;HRun=1;HaplotypeScore=59.5277;InbreedingCoeff=0.9876;MQ=84.85;MQ0=0;MQRankSum=-1.507;QD=33.55;ReadPosRankSum=3.685;VQSLOD=3.4210;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,108,1678	0/0:4,0:4:12.04:0,12,190	0/0:23,0:23:67.78:0,68,1034	0/0:25,0:25:72.24:0,72,1118	0/0:21,0:21:54.15:0,54,815	0/0:19,0:19:57.18:0,57,878	0/0:23,0:23:69.24:0,69,1098	0/0:22,0:22:66.21:0,66,1014	0/0:32,0:32:96.28:0,96,1460	0/0:17,0:17:51.16:0,51,774	0/0:12,0:12:36.10:0,36,519	1/1:0,27:27:66.22:923,66,0	0/0:20,0:20:60.20:0,60,956	0/0:23,0:23:69.22:0,69,1069	0/0:27,0:27:81.25:0,81,1270	0/0:14,0:14:42.14:0,42,672	0/0:30,0:30:90.31:0,90,1435	0/0:24,0:24:72.20:0,72,1123	0/0:25,0:25:75.24:0,75,1148	0/0:15,0:15:45.15:0,45,719	0/0:37,0:37:99:0,111,1742	0/0:21,0:21:60.20:0,60,949	1/1:0,16:16:38.76:545,39,0	1/1:0,24:24:66.22:923,66,0	0/0:17,0:17:51.16:0,51,790	0/0:25,0:25:75.25:0,75,1178	0/0:30,0:29:90.31:0,90,1438	0/0:7,0:7:21.07:0,21,323
chr10	37062388	.	TGACA	T	8636.57	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=13.195;DP=773;FS=2.789;HRun=0;HaplotypeScore=129.4491;InbreedingCoeff=1.0000;MQ=78.26;MQ0=2;MQRankSum=-5.195;QD=44.52;ReadPosRankSum=3.338;VQSLOD=5.6219;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,53:53:99:2108,114,0	0/0:14,0:14:39.13:0,39,1038	0/0:28,0:26:66.09:0,66,1506	0/0:25,0:24:63.16:0,63,1440	0/0:25,0:25:69.24:0,69,1833	1/1:0,26:26:63.21:1138,63,0	1/1:3,17:20:42.14:784,42,0	0/0:47,0:46:99:0,126,3120	0/0:33,0:33:96.32:0,96,2504	1/1:2,24:27:75.17:1323,75,0	1/1:3,14:17:51.17:949,51,0	0/0:27,0:27:81.26:0,81,2105	0/0:26,0:26:72.25:0,72,1908	0/0:27,0:27:81.28:0,81,2129	1/1:1,31:31:78.27:1455,78,0	0/0:17,0:17:51.16:0,51,1304	0/0:50,0:50:99:0,150,3803	1/1:0,18:18:48.16:879,48,0	0/0:16,0:16:48.16:0,48,1228	0/0:26,0:26:69.24:0,69,1811	0/0:43,0:43:99:0,123,3108	0/0:22,0:22:63.20:0,63,1625	0/0:28,0:28:84.24:0,84,2070	0/0:31,0:31:87.28:0,87,2264	0/0:24,0:24:72.25:0,72,1916	0/0:29,0:29:87.29:0,87,2264	0/0:27,0:27:78.25:0,78,1986	0/0:14,0:14:36.12:0,36,960
chr10	37063830	.	C	CATCCTGACTCTAGAA	10869.58	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-6.686;DP=779;FS=1.051;HRun=0;HaplotypeScore=313.4284;InbreedingCoeff=0.9996;MQ=86.45;MQ0=0;MQRankSum=-12.102;QD=106.56;ReadPosRankSum=1.130;VQSLOD=3.7430;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,135,5658	0/0:16,0:16:48.16:0,48,2173	0/0:33,0:33:89.79:0,90,3032	0/0:25,0:25:72.22:0,72,2401	1/1:8,14:25:35.84:1730,36,0	0/0:17,0:17:48.16:0,48,1840	0/0:30,0:30:87.27:0,87,3458	0/0:33,0:33:99:0,99,3694	1/1:10,18:30:60.12:3617,60,0	0/0:35,0:35:99:0,105,4395	0/0:13,0:13:36.12:0,36,1677	0/0:29,0:29:81.28:0,81,3089	0/0:24,0:24:72.25:0,72,2798	0/0:26,0:26:78.25:0,78,3312	0/0:35,0:35:99:0,99,4285	1/1:3,23:28:51.18:3784,51,0	1/1:6,9:19:27.09:1739,27,0	0/0:23,0:23:66.23:0,66,2658	0/0:23,0:23:69.22:0,69,2535	0/0:25,0:25:75.26:0,75,3157	0/0:49,0:49:99:0,144,5479	0/0:26,0:26:78.27:0,78,3428	0/0:22,0:22:63.22:0,63,2857	0/0:38,0:38:99:0,114,4661	0/0:29,0:29:87.29:0,87,3506	0/0:29,0:29:87.30:0,87,3677	0/0:36,0:36:99:0,108,4529	0/0:15,0:15:45.14:0,45,1758
chr10	37064461	.	A	ACT	672.42	PASS	AB=0.946;AC=27;AF=0.482;AN=56;BaseQRankSum=2.411;DP=775;FS=9.862;HRun=0;HaplotypeScore=227.1468;InbreedingCoeff=0.0109;MQ=57.85;MQ0=26;MQRankSum=-2.722;QD=1.40;ReadPosRankSum=0.320;VQSLOD=1.4938;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:40,0:39:22.74:29,0,23	0/1:3,4:12:14.27:39,0,14	0/0:67,0:28:44.12:0,44,654	0/0:88,0:34:60.55:0,61,670	0/1:29,0:29:1.01:1,0,21	0/1:26,0:25:9.25:19,0,9	1/1:32,0:30:6.73:46,7,0	0/1:28,0:28:6.79:7,0,28	0/0:18,1:20:0.42:0,0,21	1/1:30,0:30:10.53:107,11,0	1/1:19,0:19:2.98:24,3,0	0/0:26,0:25:9.44:0,9,333	0/1:23,0:23:12.39:12,0,40	0/1:20,0:20:3.95:20,0,4	1/1:22,0:22:0.55:20,1,0	0/1:14,2:18:5.49:127,0,5	1/1:17,0:17:6.44:57,6,0	1/1:17,0:17:11.24:97,11,0	1/1:17,0:19:8.20:65,8,0	0/1:28,0:27:3.90:4,0,72	0/0:31,0:30:1.13:0,1,3	0/0:25,1:27:1.77:0,2,15	0/0:27,0:23:33.02:0,33,431	0/1:28,0:28:14.34:14,0,315	0/1:22,0:21:2:7,0,2	0/1:31,0:31:25.60:103,0,26	0/1:16,0:16:9.72:29,0,10	0/0:5,0:5:2.84:0,3,9
chr10	37064463	.	G	GCGCTCTCTCACTCTCTCT	9230.95	PASS	AB=0.846;AC=44;AF=0.786;AN=56;BaseQRankSum=-0.431;DP=795;FS=10.560;HRun=0;HaplotypeScore=326.3641;InbreedingCoeff=0.4303;MQ=55.74;MQ0=28;MQRankSum=-2.706;QD=15.03;ReadPosRankSum=-0.468;VQSLOD=2.0864;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:39,0:38:38.92:468,39,0	0/1:12,0:12:6.11:100,0,6	0/0:65,0:26:44.89:0,45,563	0/0:88,0:33:33.83:0,34,537	1/1:29,0:29:26.04:294,26,0	1/1:26,0:25:29.31:355,29,0	1/1:33,0:31:29.10:343,29,0	1/1:27,0:27:78.76:877,79,0	0/1:4,9:25:0:0,0,1	1/1:35,0:35:83.61:1067,84,0	1/1:19,0:19:9.96:120,10,0	0/1:26,0:25:99:105,0,246	1/1:21,0:21:40.61:414,41,0	1/1:22,0:21:20.71:324,21,0	1/1:22,0:22:27.08:386,27,0	1/1:17,0:17:10.64:266,11,0	1/1:2,0:24:6.02:266,6,0	1/1:17,0:17:37.84:448,38,0	1/1:26,0:21:62.70:665,63,0	1/1:28,0:27:19.20:320,19,0	1/1:32,0:30:41.72:575,42,0	1/1:27,0:27:23.67:280,24,0	0/0:28,0:24:11.55:0,12,381	0/1:28,0:28:99:109,0,313	1/1:23,0:21:20.70:338,21,0	0/1:4,0:34:7.74:548,0,8	1/1:16,0:16:41.92:529,42,0	0/1:6,0:5:7.76:35,0,8
chr10	37064892	.	G	GCTCTCT	17752.05	PASS	AB=1.000;AC=35;AF=0.625;AN=56;BaseQRankSum=-5.194;DP=759;FS=18.532;HRun=0;HaplotypeScore=190.5154;InbreedingCoeff=0.9485;MQ=67.72;MQ0=2;MQRankSum=-13.267;QD=36.53;ReadPosRankSum=-3.595;VQSLOD=2.8206;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:21,22:47:60.21:1923,60,0	1/1:6,4:11:15.05:491,15,0	0/0:40,0:34:24.84:0,25,606	0/1:31,0:26:0.78:1,0,274	0/0:5,0:21:14.58:0,15,63	1/1:10,11:22:36.12:1126,36,0	1/1:11,11:29:51.17:1493,51,0	1/1:27,4:38:42.13:959,42,0	0/0:10,0:40:28.45:0,28,168	1/1:14,8:28:41.50:1114,42,0	1/1:12,9:25:36.08:956,36,0	0/0:23,0:24:60.19:0,60,1209	1/1:11,14:27:42.14:1318,42,0	1/1:11,13:28:38.48:1231,38,0	1/1:11,18:35:48.16:1587,48,0	0/0:5,0:29:21.43:0,21,149	0/0:4,0:24:17.14:0,17,52	1/1:7,9:17:18.06:531,18,0	1/1:19,1:22:30.10:841,30,0	1/1:11,10:26:39.13:1073,39,0	1/1:15,6:29:24.29:543,24,0	1/1:12,14:30:42.14:1262,42,0	0/0:21,0:22:45.15:0,45,935	0/0:30,0:31:75.26:0,75,1573	1/1:6,6:14:20.42:572,20,0	0/0:29,0:30:60.19:0,60,1168	1/1:11,11:26:24.08:732,24,0	0/0:12,0:12:21.07:0,21,447
chr10	37067145	.	TA	T	6527.24	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=12.543;DP=690;FS=6.035;HRun=2;HaplotypeScore=66.9374;InbreedingCoeff=0.9992;MQ=83.21;MQ0=0;MQRankSum=-1.112;QD=34.72;ReadPosRankSum=2.418;VQSLOD=5.4017;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,32:32:84.27:1090,84,0	0/0:13,0:13:39.13:0,39,571	0/0:33,0:33:92.11:0,92,1299	0/0:17,0:17:45.13:0,45,620	0/0:31,0:31:93.30:0,93,1372	1/1:0,25:25:66.21:857,66,0	1/1:0,29:29:81.26:1051,81,0	0/0:33,0:33:99:0,99,1452	0/0:27,0:27:81.27:0,81,1192	1/1:1,32:33:96.30:1232,96,0	1/1:0,18:18:42.14:545,42,0	0/0:18,0:18:54.17:0,54,787	0/0:21,0:21:63.21:0,63,941	0/0:27,0:27:78.26:0,78,1169	1/1:0,34:34:93.30:1207,93,0	0/0:29,0:29:87.26:0,87,1245	0/0:23,0:23:66.22:0,66,985	1/1:0,17:17:42.14:545,42,0	0/0:24,0:24:72.24:0,72,1058	0/0:14,0:14:42.13:0,42,606	0/0:35,0:35:99:0,105,1566	0/0:26,0:26:72.22:0,72,1038	0/0:25,0:25:75.25:0,75,1112	0/0:24,0:24:69.22:0,69,1013	0/0:24,0:24:72.24:0,72,1076	0/0:20,1:21:21.23:0,21,797	0/0:25,0:25:75.23:0,75,1085	0/0:12,0:12:36.12:0,36,533
chr10	37067326	.	T	TTG	36043.31	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-11.029;DP=779;FS=0.000;HRun=0;HaplotypeScore=79.2524;InbreedingCoeff=0.9890;MQ=80.95;MQ0=0;MQRankSum=-6.310;QD=51.42;ReadPosRankSum=3.126;VQSLOD=5.4083;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,43:46:99:2297,120,0	1/1:1,11:12:33.11:637,33,0	0/0:24,0:24:67.06:0,67,1031	0/0:16,0:16:45.12:0,45,643	1/1:0,12:12:30.10:576,30,0	1/1:0,18:18:54.19:1043,54,0	1/1:1,25:26:72.25:1371,72,0	1/1:3,26:29:84.27:1566,84,0	1/1:0,27:27:81.28:1542,81,0	1/1:2,27:31:81.28:1556,81,0	1/1:2,9:11:24.08:460,24,0	1/1:2,28:30:78.27:1486,78,0	1/1:1,22:23:60.20:1118,60,0	1/1:2,32:36:99:1994,105,0	1/1:5,31:37:72.25:1391,72,0	1/1:0,28:28:78.27:1507,78,0	1/1:0,28:29:84.29:1623,84,0	1/1:2,27:29:75.26:1448,75,0	1/1:5,20:25:72.23:1311,72,0	1/1:0,17:18:51.17:985,51,0	1/1:1,62:67:99:3587,187,0	1/1:5,33:38:99:2100,111,0	1/1:1,22:23:60.21:1159,60,0	1/1:1,50:52:99:2492,129,0	1/1:2,28:30:78.27:1484,78,0	0/0:23,1:24:11.25:0,11,932	1/1:0,24:24:69.24:1310,69,0	0/0:14,0:14:42.13:0,42,621
chr10	37067507	.	TCACA	T	17100.44	PASS	AB=0.549;AC=41;AF=0.732;AN=56;BaseQRankSum=-10.313;DP=865;FS=16.902;HRun=0;HaplotypeScore=175.6769;InbreedingCoeff=0.8833;MQ=71.17;MQ0=9;MQRankSum=0.389;QD=26.64;ReadPosRankSum=2.844;VQSLOD=3.7484;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,35:46:78.09:1310,78,0	1/1:3,8:12:21.04:323,21,0	0/0:41,0:24:38.96:0,39,699	0/0:53,0:32:35.85:0,36,568	0/0:6,1:22:27.11:0,27,164	1/1:4,18:22:48.16:792,48,0	1/1:7,30:38:63.21:1056,63,0	1/1:7,14:21:42.11:643,42,0	0/0:10,0:33:57.81:0,58,270	1/1:11,32:43:82.73:1534,83,0	1/1:3,19:22:32.99:554,33,0	1/1:7,30:37:63.21:1057,63,0	1/1:3,23:26:42.06:673,42,0	1/1:10,29:39:53.82:907,54,0	1/1:9,25:34:54.18:905,54,0	0/0:9,0:34:4.80:0,5,186	0/1:5,2:27:50.24:50,0,181	1/1:6,24:30:60.10:974,60,0	1/1:5,13:18:33.03:415,33,0	1/1:4,13:17:30.10:504,30,0	1/1:13,41:54:93.32:1562,93,0	1/1:7,21:29:45.02:756,45,0	1/1:7,19:26:30.10:490,30,0	1/1:9,40:49:57.31:1286,57,0	1/1:7,18:25:29.89:504,30,0	0/0:11,0:28:56:0,56,354	1/1:4,20:24:48.16:806,48,0	0/0:4,0:11:22.44:0,22,119
chr10	37067875	.	T	TG	6128.59	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-2.584;DP=725;FS=13.763;HRun=4;HaplotypeScore=145.7981;InbreedingCoeff=0.9996;MQ=88.22;MQ0=0;MQRankSum=-2.588;QD=34.62;ReadPosRankSum=1.525;VQSLOD=2.7201;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,41:51:99:1663,123,0	0/0:15,0:15:42.12:0,42,476	0/0:36,0:36:99:0,99,1100	0/0:22,0:22:63.12:0,63,689	0/0:30,0:30:84.24:0,84,952	1/1:1,9:10:27.09:369,27,0	1/1:6,27:33:84.24:1126,84,0	0/0:32,0:32:93.27:0,93,1055	0/0:31,0:31:81.23:0,81,919	1/1:1,26:27:81.23:1082,81,0	1/1:5,14:19:39.06:507,39,0	0/0:18,0:18:51.15:0,51,578	0/0:29,0:29:81.20:0,81,905	0/0:18,0:18:45.11:0,45,500	1/1:3,23:26:75.20:988,75,0	0/0:25,0:25:69.18:0,69,773	0/0:31,0:31:81.21:0,81,909	1/1:2,9:11:30.08:392,30,0	0/0:34,0:34:87.24:0,87,985	0/0:14,0:14:42.12:0,42,476	0/0:57,0:57:99:0,147,1625	0/0:18,0:18:51.15:0,51,578	0/0:13,0:13:34.65:0,35,378	0/0:25,0:25:59.17:0,59,641	0/0:16,0:16:39.11:0,39,442	0/0:40,0:40:99:0,114,1293	0/0:33,0:33:81.23:0,81,919	0/0:11,0:11:33.08:0,33,364
chr10	37067885	.	T	TGGAA	3061.44	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-1.547;DP=702;FS=2.709;HRun=0;HaplotypeScore=198.0864;InbreedingCoeff=0.9994;MQ=86.42;MQ0=0;MQRankSum=-6.478;QD=55.66;ReadPosRankSum=-0.323;VQSLOD=4.2760;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,138,2478	0/0:16,0:16:45.15:0,45,811	0/0:33,0:33:81.28:0,81,1469	0/0:19,0:19:42.09:0,42,691	0/0:33,0:33:93.29:0,93,1649	0/0:12,0:12:36.12:0,36,660	0/0:29,0:29:81.26:0,81,1420	0/0:33,0:33:84.27:0,84,1465	0/0:30,0:30:75.24:0,75,1329	0/0:30,0:30:72.23:0,72,1254	0/0:17,0:17:36.12:0,36,639	1/1:3,15:18:45.15:1186,45,0	0/0:28,0:28:78.25:0,78,1404	0/0:19,0:19:51.15:0,51,854	0/0:23,0:23:69.21:0,69,1202	0/0:24,0:24:60.21:0,60,1101	0/0:32,0:32:84.29:0,84,1520	0/0:12,0:12:33.10:0,33,578	0/0:26,0:26:72.23:0,72,1292	0/0:15,0:15:45.13:0,45,765	0/0:51,0:51:99:0,144,2579	0/0:19,0:19:51.17:0,51,938	1/1:4,9:13:39:786,39,0	1/1:8,16:24:51.63:1233,52,0	0/0:16,0:16:42.14:0,42,772	0/0:39,0:39:99:0,111,1897	0/0:30,0:30:81.27:0,81,1456	0/0:9,0:9:27.09:0,27,496
chr10	37067929	.	T	TC	23782.84	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-7.361;DP=650;FS=4.604;HRun=1;HaplotypeScore=83.8077;InbreedingCoeff=0.9985;MQ=84.41;MQ0=0;MQRankSum=-8.067;QD=42.62;ReadPosRankSum=4.858;VQSLOD=4.7737;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,40:44:99:1837,117,0	1/1:1,10:11:30.10:479,30,0	0/0:22,0:22:61.40:0,61,787	0/0:27,0:28:77.03:0,77,995	1/1:0,27:27:72.25:1151,72,0	1/1:0,18:18:54.18:862,54,0	1/1:0,20:20:54.18:862,54,0	1/1:1,30:31:90.27:1380,90,0	1/1:0,34:34:78.27:1246,78,0	1/1:4,20:24:63.21:1005,63,0	1/1:0,17:19:48.15:741,48,0	1/1:0,16:16:42.14:670,42,0	1/1:1,19:20:54.18:861,54,0	1/1:1,18:19:45.15:716,45,0	1/1:1,22:23:66.23:1053,66,0	1/1:0,21:21:60.20:959,60,0	1/1:0,29:29:81.28:1294,81,0	1/1:0,13:14:39.09:595,39,0	1/1:0,25:25:75.23:1170,75,0	1/1:1,19:20:51.17:815,51,0	1/1:0,59:59:99:2590,163,0	1/1:0,14:14:42.14:672,42,0	1/1:0,13:13:33.11:526,33,0	1/1:0,20:20:45.15:717,45,0	1/1:0,12:12:33.11:526,33,0	0/0:34,1:35:45.32:0,45,1208	1/1:1,24:25:66.23:1055,66,0	0/0:7,0:7:21.07:0,21,294
chr10	37068128	.	A	ATCT	71.84	PASS	AB=0.905;AC=6;AF=0.107;AN=56;BaseQRankSum=0.278;DP=459;FS=10.432;HRun=0;HaplotypeScore=114.4835;InbreedingCoeff=0.0654;MQ=46.55;MQ0=25;MQRankSum=-2.105;QD=0.68;ReadPosRankSum=0.929;VQSLOD=1.8166;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,3:20:22.60:0,23,563	0/0:11,0:11:22.16:0,22,252	1/1:17,0:2:0.47:1,0,0	0/0:9,0:3:2.37:0,2,8	0/0:24,0:24:63.38:0,63,978	0/0:24,0:23:57.18:0,57,900	0/1:8,0:9:38.22:38,0,305	0/0:25,0:24:58.48:0,58,913	0/0:21,1:22:51.17:0,51,892	0/0:18,0:18:49.40:0,49,810	0/0:13,0:13:30.34:0,30,371	0/0:17,0:17:33.47:0,33,489	0/0:8,0:8:18.53:0,19,318	0/0:10,0:9:18.52:0,19,287	0/0:14,0:14:27.09:0,27,451	0/0:13,0:12:36.11:0,36,602	0/1:26,3:27:97.67:98,0,545	0/1:20,3:21:27.90:28,0,518	0/1:25,2:24:15.63:16,0,819	0/0:15,0:15:41.40:0,41,650	0/0:7,0:7:15.05:0,15,261	0/0:9,0:9:26.67:0,27,377	0/0:11,0:11:27.54:0,28,437	0/0:16,1:17:21.29:0,21,298	0/0:17,0:17:45.04:0,45,721	0/0:18,0:17:42.14:0,42,725	0/0:17,0:16:36.09:0,36,604	0/0:12,0:12:27.09:0,27,445
chr10	37068140	.	AAAAAAAAAG	A	6876	PASS	AB=0.943;AC=36;AF=0.643;AN=56;BaseQRankSum=8.417;DP=484;FS=1.684;HRun=0;HaplotypeScore=125.1506;InbreedingCoeff=-0.0372;MQ=51.83;MQ0=24;MQRankSum=-4.029;QD=15.45;ReadPosRankSum=9.115;VQSLOD=2.6651;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:9,13:20:34.53:344,0,35	1/1:12,0:12:26.84:227,27,0	0/1:20,0:4:0.92:1,0,116	0/0:11,0:5:0.75:0,1,99	1/1:26,0:26:18.19:369,18,0	1/1:4,23:26:35.76:923,36,0	1/1:3,7:10:14.70:368,15,0	0/1:29,0:27:99:213,0,293	0/1:21,0:21:9.86:149,0,10	1/1:5,14:19:38.69:805,39,0	1/1:2,12:14:23.75:529,24,0	1/1:3,16:19:23.80:605,24,0	0/1:8,0:8:30.66:42,0,31	0/1:15,0:14:1.82:100,0,2	0/1:3,9:12:62.59:219,0,63	1/1:10,0:9:14.81:205,15,0	0/1:28,0:26:99:177,0,109	1/1:8,14:20:17.66:461,18,0	0/1:26,0:24:45.67:46,0,371	0/1:19,0:19:27.57:219,0,28	0/1:14,0:14:5.74:6,0,68	0/1:10,0:10:44.14:44,0,60	1/1:2,7:9:11.98:301,12,0	1/1:1,17:18:14.87:355,15,0	0/1:18,0:18:86.47:86,0,171	0/0:16,0:15:42.14:0,42,1106	0/1:17,0:16:3.94:81,0,4	0/0:12,0:12:27.09:0,27,731
chr10	37068141	.	AAAAAAAAG	A	7273.89	PASS	AB=0.936;AC=41;AF=0.732;AN=56;BaseQRankSum=4.641;DP=485;FS=9.366;HRun=0;HaplotypeScore=119.3086;InbreedingCoeff=0.2967;MQ=52.09;MQ0=24;MQRankSum=-2.923;QD=17.03;ReadPosRankSum=7.367;VQSLOD=2.4512;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:20,1:19:29.27:286,0,29	1/1:12,2:14:26.78:370,27,0	0/0:20,0:4:9.17:0,9,111	0/0:10,0:5:7.85:0,8,108	1/1:4,21:25:34.97:621,35,0	1/1:27,0:26:35.81:661,36,0	1/1:10,0:10:14.59:275,15,0	0/1:31,0:29:99:439,0,146	1/1:8,12:20:10.59:279,11,0	1/1:19,0:19:37.31:570,37,0	1/1:14,0:14:23.80:376,24,0	1/1:19,0:19:23.85:430,24,0	1/1:8,0:8:8.78:100,9,0	1/1:14,1:14:14.92:204,15,0	0/1:11,0:11:59.90:153,0,60	1/1:5,5:9:14.87:351,15,0	0/1:9,19:26:71.90:296,0,72	1/1:21,0:19:17.81:330,18,0	0/1:27,0:25:99:157,0,158	1/1:19,1:20:39.08:444,39,0	1/1:15,0:15:2.49:20,2,0	0/1:10,0:10:5.63:94,0,6	1/1:9,0:9:12.21:214,12,0	1/1:18,0:18:14.90:246,15,0	0/1:18,0:18:32.01:187,0,32	0/0:16,0:15:42.14:0,42,926	1/1:17,0:16:14.67:170,15,0	0/0:12,0:12:27.04:0,27,619
chr10	37068142	.	AAAAAAAG	A	7793.75	PASS	AB=0.861;AC=43;AF=0.768;AN=56;BaseQRankSum=2.789;DP=462;FS=13.534;HRun=0;HaplotypeScore=105.7698;InbreedingCoeff=0.3900;MQ=52.62;MQ0=24;MQRankSum=-3.571;QD=19.29;ReadPosRankSum=6.015;VQSLOD=2.7684;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:20,0:18:15.66:242,0,16	1/1:3,11:14:26.91:496,27,0	0/0:20,0:4:9.40:0,9,91	0/0:10,0:5:3.80:0,4,86	1/1:23,1:24:35.20:457,35,0	1/1:26,0:25:35.92:590,36,0	1/1:9,0:9:14.69:246,15,0	0/1:12,19:29:51.61:680,0,52	1/1:20,0:20:11.03:197,11,0	1/1:15,0:15:36.54:513,37,0	1/1:12,0:12:23.97:335,24,0	1/1:16,0:16:24.08:384,24,0	1/1:4,5:9:8.86:183,9,0	1/1:3,12:14:14.96:294,15,0	0/1:10,0:10:47.52:136,0,48	1/1:10,0:9:14.90:248,15,0	0/1:28,0:26:40.44:214,0,40	1/1:18,0:16:18.06:295,18,0	0/1:14,12:24:36.65:293,0,37	1/1:5,15:20:41.70:693,42,0	1/1:3,12:15:2.63:20,3,0	1/1:1,7:8:11.62:165,12,0	1/1:7,0:7:11.92:190,12,0	1/1:18,0:18:14.92:216,15,0	1/1:6,12:18:20.23:399,20,0	0/0:16,0:15:42.10:0,42,748	1/1:2,13:14:14.96:309,15,0	0/0:12,0:12:24.05:0,24,487
chr10	37070151	.	CCTCTCTCTCTCTCT	C	5234.27	PASS	AB=0.805;AC=44;AF=0.786;AN=56;BaseQRankSum=1.132;DP=557;FS=0.000;HRun=0;HaplotypeScore=310.3670;InbreedingCoeff=0.2584;MQ=53.23;MQ0=11;MQRankSum=-2.717;QD=10.73;ReadPosRankSum=-3.873;VQSLOD=2.2459;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:30:24.49:24,0,106	1/1:2,0:3:3:29,3,0	0/0:23,0:16:3.01:0,3,171	0/0:21,0:12:6.02:0,6,259	1/1:19,0:29:23.60:148,24,0	0/1:15,0:22:2.93:3,0,180	1/1:22,0:34:23.26:289,23,0	1/1:13,0:13:5.96:47,6,0	1/1:17,0:28:37.16:652,37,0	0/1:13,0:17:99:134,0,103	1/1:9,0:12:6.86:35,7,0	1/1:13,7:21:17:361,17,0	1/1:7,4:13:21.02:332,21,0	1/1:10,9:20:8.15:139,8,0	0/1:19,0:23:62.79:63,0,159	1/1:13,0:19:18.93:317,19,0	1/1:15,0:19:39.11:829,39,0	0/1:12,0:14:0.60:206,0,1	1/1:8,2:12:12.04:432,12,0	1/1:6,2:10:8.43:56,8,0	1/1:20,2:21:10.50:75,11,0	1/1:17,9:27:16.12:123,16,0	1/1:13,2:15:2.04:7,2,0	1/1:14,6:20:6.14:31,6,0	1/1:15,4:22:6.11:47,6,0	0/0:16,0:25:42.05:0,42,766	1/1:11,9:21:36.02:841,36,0	0/1:10,0:11:14.60:15,0,536
chr10	37070184	.	C	CA	90.44	PASS	AB=0.941;AC=16;AF=0.286;AN=56;BaseQRankSum=4.865;DP=447;FS=0.000;HRun=0;HaplotypeScore=240.5305;InbreedingCoeff=0.1854;MQ=30.13;MQ0=14;MQRankSum=-0.717;QD=0.46;ReadPosRankSum=-4.750;VQSLOD=1.4615;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:24:1.96:2,0,70	0/0:3,0:3:5.95:0,6,60	0/0:16,0:1:3.01:0,3,41	0/0:15,0:2:3.01:0,3,42	0/0:21,2:23:23.44:0,23,165	0/0:15,0:14:7.58:0,8,143	0/0:28,0:28:17.16:0,17,154	0/0:14,0:13:39.13:0,39,538	0/1:18,2:19:99:122,0,160	0/0:9,0:9:25.69:0,26,184	1/1:10,0:10:1.69:10,2,0	0/0:22,0:21:30.53:0,31,227	0/0:14,0:14:35.55:0,36,380	0/0:19,0:19:1.25:0,1,65	0/1:14,0:14:12.02:12,0,124	0/1:13,1:14:17.50:18,0,160	0/1:12,9:21:24.53:25,0,200	0/0:8,0:8:23.36:0,23,145	0/0:10,0:10:26.13:0,26,257	0/1:14,0:13:4.20:4,0,25	1/1:16,0:15:1.51:5,2,0	1/1:22,0:22:2.13:11,2,0	0/1:8,0:8:0:0,0,0	0/1:14,0:14:0.43:1,0,0	1/1:15,0:15:3.40:12,3,0	0/0:26,0:25:64.61:0,65,624	0/0:17,0:16:32.14:0,32,297	0/0:12,0:10:27.27:0,27,259
chr10	37070185	.	TCTC	T	220.21	PASS	AB=0.953;AC=16;AF=0.286;AN=56;BaseQRankSum=4.689;DP=448;FS=1.832;HRun=0;HaplotypeScore=242.6534;InbreedingCoeff=-0.2288;MQ=30.22;MQ0=14;MQRankSum=-1.292;QD=1.01;ReadPosRankSum=2.592;VQSLOD=2.6774;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:24:5.41:0,5,104	0/0:3,0:3:0.15:0,0,32	0/0:17,0:1:3.01:0,3,43	0/0:15,0:2:3.01:0,3,50	0/1:20,3:23:16.62:17,0,183	0/0:15,0:14:18.22:0,18,205	0/0:28,0:28:1:0,1,82	0/0:14,0:13:39.12:0,39,492	0/1:18,2:19:84.39:84,0,178	0/1:9,0:9:5.07:5,0,159	0/0:10,0:10:7.61:0,8,51	0/0:22,0:21:5.60:0,6,248	0/0:14,0:14:12.10:0,12,316	0/1:19,0:19:4.08:4,0,68	0/0:14,0:14:26.63:0,27,213	0/1:13,1:14:45.50:45,0,150	0/1:13,9:21:99:106,0,208	0/1:8,0:8:15.65:16,0,58	0/1:10,0:10:21.40:21,0,163	0/0:14,0:13:8.52:0,9,67	1/1:15,0:14:0.47:1,0,0	0/0:22,0:22:1.17:0,1,17	1/1:8,0:8:0.47:1,0,0	0/1:14,0:14:0.17:0,0,1	0/0:15,0:15:2.68:0,3,10	0/1:27,0:26:28.95:29,0,452	0/1:17,0:16:8.89:9,0,257	0/1:12,0:10:7.46:7,0,167
chr10	37070193	.	G	GCATT	1499.19	PASS	AB=0.966;AC=15;AF=0.278;AN=54;BaseQRankSum=2.178;DP=564;FS=0.000;HRun=0;HaplotypeScore=326.4435;InbreedingCoeff=0.1899;MQ=30.77;MQ0=12;MQRankSum=-3.240;QD=6.60;ReadPosRankSum=-0.214;VQSLOD=1.2985;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:30:12.13:0,12,47	1/1:4,0:4:0.36:1,0,0	./.	0/0:16,0:5:12.01:0,12,158	0/1:23,4:27:78.70:79,0,100	0/1:25,0:24:16.41:16,0,24	0/0:34,0:34:9.51:0,10,94	0/0:19,0:17:45.03:0,45,556	0/1:25,1:25:54.43:390,0,54	0/0:23,0:23:5.07:0,5,199	0/0:16,0:16:3.32:0,3,29	0/0:23,0:22:30.22:0,30,238	0/1:19,0:19:3.46:3,0,132	0/1:21,0:21:4.45:4,0,100	0/0:21,0:21:10.65:0,11,35	1/1:13,4:17:41.07:675,41,0	0/1:25,2:26:58.23:401,0,58	0/0:15,0:15:18.93:0,19,127	0/0:10,0:10:27.08:0,27,383	0/1:18,0:17:2:14,0,2	0/0:18,0:17:2.99:0,3,25	1/1:24,0:24:1.76:27,2,0	0/0:12,0:12:3.48:0,3,43	0/0:15,0:16:0.63:0,1,2	1/1:19,0:19:3.28:30,3,0	0/0:28,0:27:75.24:0,75,1229	0/0:24,0:23:16.50:0,17,245	0/0:12,0:11:26.96:0,27,425
chr10	37070197	.	G	GCATT	1173.24	PASS	AB=0.970;AC=17;AF=0.315;AN=54;BaseQRankSum=5.459;DP=585;FS=5.653;HRun=0;HaplotypeScore=314.8229;InbreedingCoeff=0.1873;MQ=31.50;MQ0=12;MQRankSum=-3.623;QD=4.62;ReadPosRankSum=0.409;VQSLOD=1.6037;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:31:11.80:0,12,57	1/1:4,0:4:1.94:18,2,0	./.	0/0:18,0:5:11.06:0,11,128	0/1:25,2:27:30.14:30,0,166	0/1:25,0:24:17.10:17,0,43	0/0:37,0:37:10.71:0,11,101	0/0:20,0:18:51.14:0,51,641	0/1:26,1:26:63.83:290,0,64	0/0:26,0:26:35.15:0,35,386	0/0:17,0:17:3.32:0,3,31	0/0:23,0:22:32.85:0,33,277	0/1:19,0:19:3.66:4,0,115	0/1:21,0:21:4.68:5,0,93	0/0:21,0:21:11.51:0,12,44	0/1:15,2:17:29.94:462,0,30	1/1:26,2:27:7:418,7,0	0/0:16,0:16:28.88:0,29,230	0/0:10,0:10:27.06:0,27,368	1/1:18,0:17:0.34:15,0,0	0/0:19,0:18:3.01:0,3,44	1/1:25,0:25:1.76:27,2,0	0/0:13,0:13:5.04:0,5,47	0/0:19,0:19:9.64:0,10,99	1/1:19,0:19:4.21:31,4,0	0/0:29,0:28:77.76:0,78,1216	0/1:24,0:23:1.78:2,0,228	0/0:12,0:11:27.09:0,27,463
chr10	37070199	.	ACG	A	115.28	PASS	AB=0.956;AC=8;AF=0.143;AN=56;BaseQRankSum=0.174;DP=603;FS=11.412;HRun=0;HaplotypeScore=309.3239;InbreedingCoeff=-0.0656;MQ=33.24;MQ0=12;MQRankSum=-1.597;QD=0.94;ReadPosRankSum=0.202;VQSLOD=1.0036;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:33:10.67:0,11,138	0/1:4,0:4:24.41:24,0,61	0/0:19,0:4:3.01:0,3,38	0/0:18,1:5:5.91:0,6,175	0/0:28,0:28:43.48:0,43,410	0/0:25,0:24:22.31:0,22,262	0/0:37,0:37:24.50:0,25,264	0/0:20,1:19:4.82:0,5,717	0/0:28,0:27:35.38:0,35,453	0/0:26,0:26:51.25:0,51,621	0/0:17,0:17:7.97:0,8,69	0/0:23,0:22:7.56:0,8,423	0/1:19,1:20:94.98:95,0,259	0/1:21,0:21:3.67:4,0,155	0/0:22,0:22:25.83:0,26,263	0/0:18,0:18:41.59:0,42,427	0/0:30,0:29:54.07:0,54,520	0/1:16,1:17:30.71:31,0,266	0/0:13,0:13:29.86:0,30,392	0/1:17,1:17:10.73:14,0,11	0/0:17,2:18:2.37:0,2,40	0/0:22,3:25:2.89:0,3,19	0/0:15,0:15:5.44:0,5,101	0/0:19,0:19:11.55:0,12,169	1/1:18,1:19:0.69:2,1,0	0/0:27,0:26:60.76:0,61,1100	0/1:21,3:23:62.67:63,0,192	0/0:12,0:11:26.59:0,27,408
chr10	37070201	.	G	GCA	791.22	PASS	AB=0.985;AC=17;AF=0.304;AN=56;BaseQRankSum=2.492;DP=626;FS=7.167;HRun=0;HaplotypeScore=322.8240;InbreedingCoeff=-0.0911;MQ=36.29;MQ0=12;MQRankSum=-3.839;QD=2.36;ReadPosRankSum=0.332;VQSLOD=0.7079;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:37,0:33:2.72:12,0,3	0/1:4,0:4:14.36:29,0,14	0/0:20,0:4:3.01:0,3,38	0/0:22,0:8:5.90:0,6,145	0/0:27,0:28:25.81:0,26,280	0/1:26,0:25:14.77:32,0,15	0/0:38,0:38:7.90:0,8,132	0/1:23,1:22:70.86:71,0,461	0/0:26,0:26:32.07:0,32,268	0/1:28,0:28:5.96:6,0,250	0/1:18,0:18:4.85:5,0,35	0/1:23,0:22:3.91:4,0,218	0/1:19,2:21:68.75:340,0,69	0/1:21,0:21:29.48:29,0,81	0/1:24,0:24:2.45:17,0,2	0/0:19,0:19:36.43:0,36,331	0/0:30,0:29:34.91:0,35,216	0/1:17,0:17:42.62:43,0,193	0/0:14,0:13:28.90:0,29,316	1/1:15,3:17:8.56:71,9,0	0/0:19,0:18:2.74:0,3,16	0/1:26,0:26:4.74:5,0,13	0/0:15,0:15:6.18:0,6,85	0/0:19,0:19:9.46:0,9,156	1/1:18,2:20:0:7,0,0	0/0:27,0:26:72.46:0,72,905	0/1:26,2:27:83.51:268,0,84	0/0:12,0:11:27:0,27,306
chr10	37070207	.	ACG	A	1517.84	PASS	AB=0.986;AC=26;AF=0.464;AN=56;BaseQRankSum=-2.856;DP=648;FS=9.742;HRun=0;HaplotypeScore=304.6777;InbreedingCoeff=-0.3271;MQ=38.09;MQ0=12;MQRankSum=-0.280;QD=2.99;ReadPosRankSum=1.647;VQSLOD=0.4308;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:38,0:34:12.15:12,0,21	0/1:4,0:4:19.95:24,0,20	0/0:26,0:5:10.63:0,11,123	0/0:30,1:9:13.84:0,14,163	0/1:25,0:25:19.21:19,0,120	0/1:24,0:23:18.42:18,0,19	0/1:36,0:36:7.97:8,0,46	0/1:24,0:23:84.14:84,0,146	0/1:30,1:30:55.91:56,0,128	0/1:31,0:31:57.34:130,0,57	0/1:19,0:19:0.76:1,0,40	0/1:27,0:25:47.98:162,0,48	0/1:21,0:21:70.11:100,0,70	0/1:20,0:20:13.96:14,0,71	0/0:25,0:25:11.16:0,11,77	0/1:20,0:20:43.35:43,0,165	0/1:29,0:28:24.02:24,0,106	0/1:17,0:17:44.39:57,0,44	0/0:16,0:15:13.07:0,13,87	0/1:21,0:20:10.88:15,0,11	0/0:17,0:16:2.33:0,2,20	0/0:25,0:25:6.06:0,6,35	0/1:13,5:18:47.91:76,0,48	1/1:20,2:22:20.59:302,21,0	1/1:20,0:20:1.57:4,2,0	1/1:25,0:24:46.70:345,47,0	0/1:27,0:26:15.53:119,0,16	1/1:8,0:7:7.53:67,8,0
chr10	37070209	.	GCA	G	1518.51	PASS	AB=0.935;AC=19;AF=0.339;AN=56;BaseQRankSum=-3.898;DP=642;FS=7.666;HRun=0;HaplotypeScore=296.2906;InbreedingCoeff=-0.0890;MQ=38.62;MQ0=15;MQRankSum=1.751;QD=4.18;ReadPosRankSum=1.353;VQSLOD=1.4710;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:35,5:36:11.44:92,0,11	0/1:3,0:4:6.56:7,0,51	0/0:30,0:5:15.04:0,15,198	0/0:32,1:9:17.53:0,18,185	0/1:24,0:25:0.38:0,0,257	0/1:19,5:23:12.22:61,0,12	0/1:28,2:30:48.10:48,0,52	0/0:22,0:21:5.31:0,5,207	0/0:30,0:30:6.69:0,7,319	0/1:26,4:30:86.78:307,0,87	0/1:15,4:19:21.30:21,0,49	0/1:17,0:26:36.51:37,0,110	0/1:14,0:20:18.28:18,0,151	0/0:16,0:19:6.26:0,6,101	0/1:22,3:25:13.15:13,0,58	0/0:20,0:21:3.60:0,4,353	0/0:29,0:28:26.86:0,27,220	0/1:16,2:18:35:117,0,35	0/0:14,0:13:22.56:0,23,154	0/0:18,0:19:6.25:0,6,40	0/0:16,0:16:3.01:0,3,46	0/0:22,0:24:10.64:0,11,78	0/1:14,0:18:27.60:28,0,39	1/1:12,0:24:17.72:128,18,0	0/0:17,0:19:2.21:0,2,21	1/1:7,18:24:51.15:604,51,0	0/1:20,0:25:15.88:16,0,174	1/1:4,3:6:17.88:187,18,0
chr10	37070211	.	A	ACG	2499.08	PASS	AB=0.947;AC=26;AF=0.464;AN=56;BaseQRankSum=2.199;DP=653;FS=0.942;HRun=0;HaplotypeScore=297.1298;InbreedingCoeff=-0.1176;MQ=40.22;MQ0=15;MQRankSum=-2.934;QD=5.13;ReadPosRankSum=1.781;VQSLOD=2.6879;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:31,7:36:17.19:224,17,0	0/1:4,0:4:10.37:29,0,10	0/0:34,0:6:18.05:0,18,235	0/0:34,0:11:17.51:0,18,180	0/0:26,0:26:3.75:0,4,304	1/1:12,9:22:22.22:307,22,0	0/1:23,5:30:7.66:114,0,8	0/1:21,0:20:6.11:6,0,255	0/0:31,0:30:2.44:0,2,266	0/1:21,8:30:4.04:644,0,4	0/1:13,2:19:22.20:35,0,22	0/1:29,0:27:80.84:212,0,81	1/1:20,0:20:16.67:208,17,0	0/1:20,0:20:9.14:9,0,95	1/1:11,9:25:20.31:236,20,0	0/1:21,0:21:8.32:8,0,250	0/1:29,0:28:10.55:11,0,211	0/1:14,4:18:21.86:209,0,22	0/0:15,0:14:18.27:0,18,177	0/1:20,0:19:13.83:42,0,14	0/0:18,0:17:2.85:0,3,39	0/1:23,0:23:1.80:2,0,49	0/1:19,0:19:32.04:49,0,32	1/1:24,0:24:19.45:131,19,0	0/1:20,0:20:4.47:4,0,20	0/1:26,0:25:84.99:85,0,202	0/1:26,0:25:78.57:103,0,79	0/0:7,0:6:4.97:0,5,47
chr10	37070238	.	GA	G	7644.95	PASS	AB=0.560;AC=47;AF=0.839;AN=56;BaseQRankSum=2.571;DP=618;FS=9.888;HRun=11;HaplotypeScore=178.9284;InbreedingCoeff=0.7937;MQ=62.71;MQ0=8;MQRankSum=-4.492;QD=15.35;ReadPosRankSum=2.355;VQSLOD=3.6814;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,30:35:59.90:489,60,0	1/1:3,4:7:11.98:98,12,0	0/0:47,1:20:35:0,35,285	0/0:39,0:17:0.52:0,1,142	1/1:6,15:21:32.78:263,33,0	1/1:5,22:27:50.89:416,51,0	1/1:5,22:27:56.89:466,57,0	1/1:4,21:25:56.57:469,57,0	1/1:6,17:24:11.97:293,12,0	1/1:6,23:29:62.88:516,63,0	1/1:3,11:14:32:247,32,0	1/1:7,17:23:44.76:366,45,0	1/1:4,12:16:32.93:268,33,0	0/1:3,11:14:6.56:156,0,7	1/1:3,21:24:50.82:405,51,0	1/1:6,15:21:38.91:320,39,0	1/1:6,25:31:73.87:589,74,0	1/1:3,10:13:29.91:240,30,0	1/1:4,7:11:14.93:118,15,0	1/1:5,9:14:23.23:215,23,0	1/1:2,13:15:16.38:144,16,0	1/1:3,17:20:26.79:247,27,0	1/1:2,15:17:35.77:280,36,0	1/1:2,25:27:59.74:489,60,0	1/1:1,15:17:28.21:208,28,0	0/0:24,0:24:60.08:0,60,625	1/1:5,19:23:41.91:343,42,0	0/0:9,0:9:18.04:0,18,187
chr10	37071111	.	GA	G	1448.67	PASS	AB=0.745;AC=19;AF=0.339;AN=56;BaseQRankSum=-1.336;DP=456;FS=7.774;HRun=13;HaplotypeScore=61.6916;InbreedingCoeff=0.3576;MQ=56.25;MQ0=10;MQRankSum=1.314;QD=7.51;ReadPosRankSum=0.794;VQSLOD=2.0601;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:32:56.04:0,56,290	0/1:2,5:7:14.26:73,0,14	0/1:6,1:5:7.59:8,0,66	0/1:7,0:3:0.36:0,0,1	0/0:22,2:27:0.96:0,1,315	0/0:3,0:11:17.04:0,17,85	0/0:10,0:19:46.31:0,46,273	1/1:9,15:23:19.23:279,19,0	0/1:10,1:10:3.82:4,0,121	0/0:14,0:25:47.19:0,47,282	0/0:8,1:19:18.85:0,19,218	0/0:17,1:18:8.08:0,8,236	0/1:4,5:11:7.26:99,0,7	1/1:3,9:12:23.85:175,24,0	0/0:8,0:13:11.14:0,11,55	0/0:8,1:10:2.11:0,2,175	0/0:24,0:22:30.51:0,31,288	0/0:5,0:21:37.57:0,38,201	0/1:7,7:14:25.88:107,0,26	1/1:4,11:16:28.84:203,29,0	1/1:8,11:19:23.08:174,23,0	0/1:5,9:15:0.28:152,0,0	0/0:13,0:12:18.03:0,18,175	0/0:17,0:19:48.64:0,49,443	1/1:3,12:16:25.87:181,26,0	0/0:8,0:9:11.17:0,11,136	0/1:6,9:13:25.53:164,0,26	0/1:15,3:18:7.71:8,0,281
chr10	37071465	.	GAGTA	G	2105.32	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.215;DP=957;FS=0.573;HRun=0;HaplotypeScore=162.6051;InbreedingCoeff=0.9909;MQ=61.87;MQ0=1;MQRankSum=-1.822;QD=41.28;ReadPosRankSum=2.653;VQSLOD=3.9050;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,153,3801	0/0:8,0:8:24.08:0,24,648	0/0:45,3:39:99:0,107,2590	0/0:35,0:30:74.99:0,75,1893	0/0:27,0:27:75.18:0,75,1853	0/0:26,0:26:78.27:0,78,2064	0/0:36,0:36:99:0,102,2679	0/0:40,0:40:99:0,117,2896	0/0:44,0:44:99:0,129,3189	0/0:59,0:59:99:0,168,4256	0/0:23,0:23:60.09:0,60,1411	0/0:40,0:40:99:0,111,2907	0/0:29,0:29:81.28:0,81,2104	0/0:32,0:32:75:0,75,2184	0/0:36,0:36:99:0,108,2687	0/0:31,0:31:93.26:0,93,2313	0/0:17,0:17:42.09:0,42,1018	0/0:31,0:31:60.03:0,60,2044	0/0:17,0:17:48.16:0,48,1153	0/0:30,0:30:90.31:0,90,2416	0/0:59,0:59:99:0,178,4666	0/0:33,0:33:96.31:0,96,2446	0/0:33,0:33:99:0,99,2466	0/0:39,0:39:99:0,108,2628	0/0:37,0:37:99:0,105,2694	1/1:4,32:36:15.31:1654,15,0	0/0:41,0:40:99:0,120,3051	1/1:2,13:15:30.10:569,30,0
chr10	37071735	.	A	ATG	1534.52	PASS	AB=0.640;AC=2;AF=0.036;AN=56;BaseQRankSum=-7.647;DP=823;FS=2.099;HRun=0;HaplotypeScore=121.6865;InbreedingCoeff=-0.0159;MQ=65.59;MQ0=1;MQRankSum=2.235;QD=25.16;ReadPosRankSum=-0.458;VQSLOD=4.2505;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,111,1312	0/0:13,0:13:36.07:0,36,429	0/0:26,0:20:41.74:0,42,423	0/0:20,0:17:32.93:0,33,359	0/0:36,0:36:78.21:0,78,939	0/0:19,0:21:44.79:0,45,499	0/0:25,0:25:63.13:0,63,736	0/0:37,0:37:66.03:0,66,701	0/0:28,0:28:72.17:0,72,860	0/0:27,0:27:48.14:0,48,586	0/0:17,0:18:47.94:0,48,533	0/0:32,0:32:87.23:0,87,1059	0/0:33,0:33:78.05:0,78,916	0/0:20,0:20:51.15:0,51,619	0/0:27,0:28:72.02:0,72,842	0/0:29,0:29:84.20:0,84,998	0/0:42,0:42:99:0,102,1232	0/0:28,0:30:77.90:0,78,863	0/0:25,0:25:54.09:0,54,615	0/0:30,0:31:72.02:0,72,852	0/0:44,0:45:99:0,99,1184	0/0:37,0:37:93.23:0,93,1109	0/0:25,0:25:60.19:0,60,743	0/0:33,0:33:78.19:0,78,935	0/0:24,0:25:72.03:0,72,845	0/1:13,32:44:70.81:1398,0,71	0/0:22,0:23:66.01:0,66,767	0/1:9,7:16:16.69:225,0,17
chr10	37071989	.	A	AT	1197.89	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-7.875;DP=608;FS=6.942;HRun=8;HaplotypeScore=69.8262;InbreedingCoeff=0.9745;MQ=66.50;MQ0=0;MQRankSum=-1.747;QD=23.96;ReadPosRankSum=1.680;VQSLOD=4.4367;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:56.83:0,57,500	0/0:11,0:11:30.01:0,30,275	0/0:12,0:12:26.93:0,27,231	0/0:8,0:6:9:0,9,82	0/0:34,0:34:99:0,99,906	0/0:12,0:12:24.01:0,24,220	0/0:22,1:23:34.42:0,34,569	0/0:30,0:30:63:0,63,573	0/0:20,0:20:51.02:0,51,467	0/0:26,0:26:69.03:0,69,631	0/0:22,0:22:60.01:0,60,544	1/1:2,17:19:42.12:485,42,0	0/0:14,0:14:39.02:0,39,357	0/0:15,0:15:29.97:0,30,269	0/0:22,0:22:29.49:0,29,442	0/0:21,0:21:60:0,60,537	0/0:31,0:31:81:0,81,729	0/0:29,0:29:72.04:0,72,659	0/0:21,0:22:53.06:0,53,472	0/0:31,0:31:90.05:0,90,823	0/0:15,0:15:39.02:0,39,357	0/0:34,0:34:99:0,99,906	1/1:0,13:14:38.86:412,39,0	1/1:4,13:17:17.63:442,18,0	0/0:33,0:33:84.02:0,84,764	0/0:26,0:26:63:0,63,571	0/0:29,0:28:84.03:0,84,763	0/0:13,0:13:39.02:0,39,357
chr10	37075152	.	GT	G	12158.56	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-0.749;DP=484;FS=2.786;HRun=5;HaplotypeScore=124.6181;InbreedingCoeff=0.9887;MQ=64.42;MQ0=1;MQRankSum=-6.677;QD=30.02;ReadPosRankSum=2.474;VQSLOD=3.8160;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,19:19:57.16:639,57,0	1/1:2,5:7:21.03:218,21,0	0/0:30,0:23:51.07:0,51,593	0/0:23,0:15:19.43:0,19,284	1/1:4,12:16:36.10:401,36,0	1/1:5,10:15:42.12:475,42,0	1/1:0,13:13:36.10:408,36,0	1/1:4,23:27:72.20:815,72,0	1/1:5,19:24:72.17:796,72,0	1/1:2,19:21:54.15:611,54,0	1/1:2,17:19:51.14:574,51,0	1/1:3,10:13:39.11:442,39,0	1/1:3,8:11:27.08:305,27,0	1/1:4,10:14:36.09:400,36,0	1/1:6,21:27:75.20:840,75,0	1/1:1,11:12:33.09:372,33,0	1/1:3,26:29:72.19:806,72,0	1/1:4,10:13:36.06:389,36,0	1/1:6,11:17:39.06:427,39,0	1/1:2,12:14:36.06:393,36,0	1/1:2,5:6:18.05:204,18,0	1/1:1,20:21:60.17:672,60,0	1/1:0,7:7:21.06:234,21,0	1/1:3,11:13:30.08:335,30,0	1/1:2,26:28:84.24:946,84,0	0/0:19,0:19:54.16:0,54,721	1/1:4,12:16:44.98:455,45,0	0/0:5,0:5:15.05:0,15,201
chr10	37075170	.	TGG	T	12931.84	PASS	AB=0.962;AC=53;AF=0.946;AN=56;BaseQRankSum=-1.183;DP=498;FS=6.180;HRun=8;HaplotypeScore=142.2350;InbreedingCoeff=0.5980;MQ=66.18;MQ0=4;MQRankSum=-4.620;QD=27.46;ReadPosRankSum=5.756;VQSLOD=3.3192;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,17:21:48.14:578,48,0	1/1:2,5:7:12.03:146,12,0	0/0:26,0:21:8.93:0,9,457	0/1:24,0:16:7.77:8,0,238	1/1:1,13:14:39.12:467,39,0	1/1:1,15:16:42.13:512,42,0	1/1:3,16:19:39.12:476,39,0	1/1:5,22:27:66.19:804,66,0	1/1:1,19:20:51.16:622,51,0	1/1:3,17:20:51.16:622,51,0	1/1:3,12:15:36.11:439,36,0	1/1:5,8:13:18.05:219,18,0	1/1:2,12:13:30.09:366,30,0	1/1:2,12:14:33.10:402,33,0	1/1:1,22:23:60.19:732,60,0	1/1:1,15:16:45.13:537,45,0	1/1:8,17:25:51.15:622,51,0	1/1:4,12:15:27.08:329,27,0	1/1:2,17:19:48.13:573,48,0	1/1:2,10:11:27.08:329,27,0	1/1:2,10:10:27.04:313,27,0	1/1:2,20:22:57.17:695,57,0	1/1:1,10:11:33.10:402,33,0	1/1:1,17:18:36.58:438,37,0	1/1:4,25:29:78.20:934,78,0	1/1:2,22:24:66.19:794,66,0	1/1:2,14:16:42.12:500,42,0	1/1:0,2:2:6.02:73,6,0
chr10	37076222	.	G	GT	7508.12	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-16.129;DP=682;FS=0.305;HRun=9;HaplotypeScore=94.0180;InbreedingCoeff=0.9868;MQ=74.63;MQ0=0;MQRankSum=1.032;QD=24.86;ReadPosRankSum=-0.162;VQSLOD=4.7507;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,117,1014	1/1:1,11:12:27.06:297,27,0	0/0:24,0:20:14.19:0,14,212	0/0:15,1:16:8.30:0,8,168	0/0:26,0:26:64.72:0,65,568	0/0:15,0:15:38.98:0,39,339	0/0:20,0:20:56.89:0,57,481	1/1:4,17:21:47.49:505,47,0	0/0:27,0:27:68.94:0,69,591	0/0:39,0:39:99:0,102,873	0/0:15,0:15:41.96:0,42,357	1/1:5,25:31:66.16:720,66,0	1/1:2,20:22:34.51:605,35,0	1/1:3,21:24:36.50:575,37,0	0/0:22,0:22:59.93:0,60,513	0/0:31,0:31:80.95:0,81,697	0/0:33,0:33:89.96:0,90,780	0/0:27,0:26:74.98:0,75,651	1/1:2,16:19:53.92:539,54,0	1/1:4,21:25:60.08:637,60,0	1/1:7,15:22:42.11:464,42,0	1/1:1,16:17:42.06:442,42,0	1/1:3,23:26:57.11:617,57,0	1/1:3,33:37:64.02:913,64,0	1/1:1,17:18:39.11:431,39,0	0/0:35,0:35:98.94:0,99,852	1/1:1,27:28:69.19:763,69,0	0/0:6,0:6:18:0,18,156
chr10	37076431	.	TC	T	18076.96	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=5.969;DP=762;FS=15.072;HRun=7;HaplotypeScore=117.0263;InbreedingCoeff=0.9998;MQ=79.41;MQ0=0;MQRankSum=-5.716;QD=26.70;ReadPosRankSum=4.200;VQSLOD=3.4245;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,43:45:99:1213,120,0	1/1:1,12:13:30.07:306,30,0	0/0:19,0:20:49.67:0,50,569	0/0:21,0:20:34.58:0,35,391	1/1:2,25:27:72.02:700,72,0	1/1:3,17:20:51.11:520,51,0	1/1:2,29:31:72.12:724,72,0	1/1:5,26:31:75.15:758,75,0	1/1:2,26:29:68.18:679,68,0	1/1:0,24:24:72.13:725,72,0	1/1:0,25:25:69.07:690,69,0	1/1:2,34:36:99:1031,102,0	1/1:2,23:25:63.14:643,63,0	1/1:0,29:29:81.18:826,81,0	1/1:1,24:25:69.15:704,69,0	1/1:2,20:22:60.14:612,60,0	1/1:1,34:35:96.22:979,96,0	1/1:1,22:23:63.14:643,63,0	1/1:6,25:31:75.15:757,75,0	1/1:1,17:18:48.11:489,48,0	1/1:4,51:55:99:1469,144,0	1/1:1,21:22:66.15:673,66,0	1/1:0,22:22:57.11:581,57,0	1/1:1,37:38:99:1010,99,0	1/1:0,21:21:60.14:611,60,0	0/0:28,1:29:53.63:0,54,964	1/1:3,27:30:72.16:735,72,0	0/0:15,0:15:39.12:0,39,491
chr10	37076836	.	GACACACACACAGACACACACACACAC	G	3928.88	PASS	AB=0.848;AC=23;AF=0.411;AN=56;BaseQRankSum=5.494;DP=730;FS=2.596;HRun=0;HaplotypeScore=337.9389;InbreedingCoeff=0.6826;MQ=61.60;MQ0=25;MQRankSum=-1.166;QD=11.26;ReadPosRankSum=-1.127;VQSLOD=1.7703;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:65.99:0,66,3325	1/1:4,0:4:5.99:49,6,0	0/1:46,0:17:17.01:17,0,53	0/1:44,0:26:5.66:6,0,212	0/0:24,0:22:37.27:0,37,875	0/0:18,0:18:33.08:0,33,2075	0/0:41,0:41:97.18:0,97,4850	1/1:26,0:25:62.66:480,63,0	0/0:18,0:18:39.07:0,39,1705	0/0:24,0:23:56.36:0,56,2068	0/0:11,0:9:5.27:0,5,126	0/0:24,0:24:7.82:0,8,385	1/1:1,17:18:12.04:821,12,0	1/1:3,30:33:16.87:1229,17,0	0/0:20,0:20:37.26:0,37,2415	0/0:24,0:25:45.97:0,46,1642	0/0:35,0:34:48.82:0,49,1390	0/0:31,0:31:74.33:0,74,4198	1/1:6,10:15:29.74:434,30,0	0/1:3,16:19:0:0,0,0	1/1:10,65:74:1.25:3,1,0	1/1:1,24:25:11.42:254,11,0	1/1:11,0:11:2.76:25,3,0	0/0:35,0:34:9.03:0,9,494	1/1:1,11:11:3.01:202,3,0	0/0:21,0:20:50.67:0,51,1428	1/1:3,17:20:5.17:409,5,0	0/0:21,0:21:45:0,45,1254
chr10	37076840	.	CACACACAG	C	2120.72	PASS	AB=0.932;AC=29;AF=0.537;AN=54;BaseQRankSum=7.455;DP=719;FS=0.000;HRun=0;HaplotypeScore=189.5238;InbreedingCoeff=0.3462;MQ=59.65;MQ0=27;MQRankSum=-3.371;QD=4.43;ReadPosRankSum=0.246;VQSLOD=2.2030;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:13.30:0,13,638	1/1:5,0:5:5.99:49,6,0	0/1:42,0:13:17.01:17,0,53	0/1:39,0:21:6.59:7,0,134	0/0:24,0:22:16.30:0,16,261	0/0:17,0:17:30.02:0,30,282	0/0:41,0:41:97.06:0,97,1001	1/1:26,0:25:62.66:480,63,0	0/1:18,0:18:89.01:89,0,201	0/0:26,0:25:53.93:0,54,517	0/0:10,0:8:5.49:0,5,49	0/1:2,23:25:11.71:75,0,12	1/1:18,0:18:12.04:238,12,0	1/1:32,0:32:17.66:357,18,0	0/0:20,0:20:22.03:0,22,279	0/1:24,0:24:99:252,0,173	0/1:33,0:32:66.64:67,0,275	0/0:32,0:32:74.09:0,74,699	1/1:14,0:13:20.73:184,21,0	./.	1/1:75,0:73:0.47:1,0,0	1/1:25,0:25:9.24:52,9,0	1/1:3,8:11:2.78:25,3,0	1/1:5,33:37:8.83:190,9,0	1/1:12,0:11:3.01:56,3,0	0/1:23,0:22:45.88:46,0,341	1/1:19,0:19:5.52:119,6,0	0/0:19,0:18:12.20:0,12,302
chr10	37076846	.	CAG	C	938.90	PASS	AB=1.000;AC=28;AF=0.519;AN=54;BaseQRankSum=5.952;DP=695;FS=5.655;HRun=0;HaplotypeScore=147.9565;InbreedingCoeff=0.4055;MQ=58.03;MQ0=28;MQRankSum=-1.313;QD=2.09;ReadPosRankSum=-2.506;VQSLOD=1.9989;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:34,0:34:14.02:14,0,297	1/1:5,0:5:5.82:48,6,0	0/1:38,0:12:17.01:17,0,52	0/1:33,0:15:7.06:7,0,134	0/0:21,1:20:9.05:0,9,254	0/0:17,0:17:9:0,9,126	0/0:42,0:42:50.32:0,50,588	1/1:1,21:22:62.66:480,63,0	0/0:17,0:17:36.16:0,36,262	0/1:25,0:24:6.11:6,0,342	0/1:11,0:9:12.75:13,0,41	1/1:26,0:26:8.18:65,8,0	1/1:17,0:17:11.77:71,12,0	1/1:31,0:31:17.52:107,18,0	0/1:22,0:22:5.44:5,0,170	0/0:23,0:23:37.89:0,38,259	0/0:34,0:33:44.26:0,44,328	0/0:31,0:31:65.66:0,66,402	1/1:12,0:11:20.60:142,21,0	./.	0/1:73,0:70:0:0,0,0	1/1:25,0:25:8.77:51,9,0	1/1:9,0:9:2.89:25,3,0	0/1:35,0:34:3.63:15,0,4	1/1:12,0:11:2.94:18,3,0	0/0:25,0:24:13.74:0,14,379	1/1:19,0:19:5.72:35,6,0	0/0:18,0:17:44.78:0,45,359
chr10	37076848	.	GACAC	G	2900.77	PASS	AB=0.925;AC=39;AF=0.750;AN=52;BaseQRankSum=0.204;DP=690;FS=26.583;HRun=0;HaplotypeScore=154.2968;InbreedingCoeff=0.0572;MQ=57.09;MQ0=30;MQRankSum=-1.128;QD=5.10;ReadPosRankSum=4.961;VQSLOD=1.0430;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:22,11:35:7.71:413,8,0	0/0:5,0:5:0.47:0,0,1	./.	0/0:31,0:13:0:0,0,0	1/1:15,0:17:2.74:12,3,0	1/1:7,9:17:21.05:308,21,0	0/1:33,10:43:20.61:424,0,21	./.	1/1:9,0:16:7.14:56,7,0	1/1:24,4:25:1.49:268,1,0	1/1:9,1:9:6.46:66,6,0	0/1:27,0:27:17.65:18,0,23	1/1:17,0:17:12.01:111,12,0	1/1:30,0:30:17.67:167,18,0	1/1:14,4:22:13.80:292,14,0	1/1:11,0:23:15.72:122,16,0	1/1:18,0:32:5.74:56,6,0	1/1:15,16:31:31.28:511,31,0	0/1:11,0:10:15.61:19,0,16	0/0:17,0:17:0.47:0,0,1	1/1:72,0:69:0.47:1,0,0	1/1:25,0:25:0.47:1,0,0	0/0:10,0:10:0:0,0,0	1/1:35,0:34:0.60:21,1,0	1/1:12,0:11:3:25,3,0	0/1:20,0:25:37.81:38,0,129	1/1:19,0:19:5.84:56,6,0	0/1:17,0:16:24.02:31,0,24
chr10	37076945	.	GGT	G	5660.03	PASS	AB=0.526;AC=13;AF=0.232;AN=56;BaseQRankSum=8.690;DP=617;FS=5.023;HRun=0;HaplotypeScore=87.4721;InbreedingCoeff=0.8809;MQ=82.48;MQ0=0;MQRankSum=-0.107;QD=37.99;ReadPosRankSum=2.124;VQSLOD=6.5058;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,24:26:72.22:1039,72,0	0/0:10,0:10:30.10:0,30,561	0/0:15,0:15:42.14:0,42,725	0/0:20,0:20:54.18:0,54,937	0/0:26,0:26:75.26:0,75,1376	1/1:1,18:19:42.14:619,42,0	1/1:1,24:25:69.23:1016,69,0	0/0:17,0:17:51.17:0,51,894	0/0:25,0:25:72.25:0,72,1341	1/1:1,18:19:54.18:795,54,0	1/1:2,15:17:39.08:574,39,0	0/0:24,0:24:69.24:0,69,1291	0/0:19,0:19:57.20:0,57,1066	0/0:18,0:18:51.17:0,51,955	1/1:0,23:23:60.20:883,60,0	0/0:21,0:21:63.22:0,63,1175	0/0:25,0:25:69.24:0,69,1291	0/1:2,18:20:52.19:735,0,52	0/0:24,0:24:66.23:0,66,1209	0/0:17,0:17:51.17:0,51,955	0/0:87,0:87:99:0,226,4168	0/0:14,0:14:39.13:0,39,730	0/0:16,0:16:48.16:0,48,898	0/0:30,0:30:81.28:0,81,1516	0/0:17,0:17:45.15:0,45,843	0/0:25,0:25:72.23:0,72,1294	0/0:16,0:16:42.14:0,42,786	0/0:2,0:2:6.02:0,6,112
chr10	37079487	.	T	TA	991.47	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-6.801;DP=584;FS=3.810;HRun=11;HaplotypeScore=57.3052;InbreedingCoeff=0.9492;MQ=67.98;MQ0=2;MQRankSum=-0.023;QD=17.39;ReadPosRankSum=2.154;VQSLOD=4.8785;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:43:91.63:0,92,698	0/0:11,0:11:26.85:0,27,204	0/0:16,0:15:13.88:0,14,138	0/0:15,0:10:16.89:0,17,116	0/0:26,0:27:67.71:0,68,512	0/0:20,0:20:56.77:0,57,441	0/0:20,0:20:45.87:0,46,334	0/0:36,0:37:73.68:0,74,559	0/0:11,0:11:23.88:0,24,181	0/0:26,0:26:33.90:0,34,415	0/0:13,0:13:35.86:0,36,279	1/1:3,13:16:9.83:281,10,0	0/0:16,0:16:38.78:0,39,299	0/0:21,0:21:41.80:0,42,325	0/0:17,0:17:40.86:0,41,308	0/0:21,0:21:50.76:0,51,392	0/0:25,2:27:13.81:0,14,469	0/0:16,0:17:43.81:0,44,324	0/0:24,0:24:62.73:0,63,484	0/0:26,0:26:62.72:0,63,487	0/0:11,0:13:30.80:0,31,207	0/0:25,0:25:59.74:0,60,461	1/1:4,14:18:39.08:396,39,0	1/1:5,18:23:45.08:452,45,0	0/0:20,0:21:46.85:0,47,354	0/0:26,0:26:53.12:0,53,400	0/0:23,0:26:63.82:0,64,473	0/0:5,0:6:10.98:0,11,76
chr10	37079834	.	T	TGATA	5743.49	PASS	AB=1.000;AC=24;AF=0.444;AN=54;BaseQRankSum=0.711;DP=644;FS=2.380;HRun=0;HaplotypeScore=168.6382;InbreedingCoeff=0.7000;MQ=58.75;MQ0=4;MQRankSum=-0.448;QD=17.78;ReadPosRankSum=-1.554;VQSLOD=4.2470;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:21,0:32:0.51:1,0,32	0/0:11,0:11:15.02:0,15,230	./.	0/1:16,0:14:0:0,0,0	1/1:21,0:21:12.01:250,12,0	1/1:28,0:28:42.06:682,42,0	1/1:18,0:17:12.03:217,12,0	0/0:34,0:34:2.97:0,3,20	1/1:27,0:27:60.20:1233,60,0	0/1:23,0:21:22.09:304,0,22	1/1:10,0:10:6.02:127,6,0	0/0:23,0:23:11.94:0,12,175	0/0:21,0:21:33.10:0,33,475	0/0:24,0:24:27.07:0,27,365	1/1:29,0:29:21.04:359,21,0	1/1:24,0:24:39.12:800,39,0	0/1:26,0:26:11.74:590,0,12	1/1:18,0:18:12.87:218,13,0	0/0:27,0:27:15.05:0,15,224	0/0:17,0:17:12.04:0,12,183	0/0:18,0:18:27.09:0,27,410	0/0:21,0:22:33.10:0,33,480	0/0:26,0:25:39.11:0,39,557	0/0:26,0:25:36.12:0,36,553	0/0:25,0:25:33.11:0,33,507	1/1:16,11:28:10.48:823,10,0	0/0:24,0:24:21.07:0,21,323	1/1:3,18:21:6.02:140,6,0
chr10	37079878	.	AGAT	A	1672.28	PASS	AB=0.919;AC=18;AF=0.321;AN=56;BaseQRankSum=6.864;DP=709;FS=1.446;HRun=0;HaplotypeScore=241.6237;InbreedingCoeff=0.4574;MQ=49.62;MQ0=7;MQRankSum=1.475;QD=5.11;ReadPosRankSum=3.138;VQSLOD=2.6380;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:35,0:35:9.63:81,10,0	0/0:10,0:10:24.08:0,24,355	0/0:9,0:3:9.03:0,9,126	0/0:10,0:4:12.04:0,12,168	0/1:21,0:21:28.90:29,0,62	1/1:18,11:29:40.04:455,40,0	1/1:25,2:26:13.24:101,13,0	0/0:41,0:41:99:0,117,1420	0/1:33,3:36:99:179,0,195	1/1:19,3:20:17.57:415,18,0	1/1:9,3:12:5.33:46,5,0	0/0:21,0:21:22.66:0,23,191	0/0:26,1:27:59.91:0,60,712	0/0:25,0:25:48.11:0,48,603	1/1:20,16:36:18.81:201,19,0	0/1:27,2:29:99:150,0,152	0/1:19,5:24:77.69:78,0,141	0/1:15,4:19:33.98:88,0,34	0/0:21,0:18:46.97:0,47,664	0/0:19,0:19:54.16:0,54,685	0/0:22,0:22:54.17:0,54,831	0/0:26,0:26:50.52:0,51,749	0/0:24,0:24:37.84:0,38,425	0/0:34,0:33:47.27:0,47,571	0/0:44,0:44:99:0,105,1415	0/1:37,0:37:40.07:40,0,1275	0/0:24,0:24:49.79:0,50,655	0/0:25,0:23:21.07:0,21,325
chr10	37079881	.	T	TA	2638.70	PASS	AB=0.956;AC=18;AF=0.321;AN=56;BaseQRankSum=3.645;DP=718;FS=0.408;HRun=1;HaplotypeScore=223.6646;InbreedingCoeff=0.4198;MQ=49.91;MQ0=7;MQRankSum=2.848;QD=8.12;ReadPosRankSum=3.660;VQSLOD=1.1493;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:36,1:37:10.97:85,11,0	0/0:10,0:10:24.08:0,24,313	0/0:11,0:5:12.04:0,12,167	0/0:12,0:6:15.04:0,15,195	0/1:21,0:21:34.41:69,0,34	1/1:27,1:28:41.98:453,42,0	1/1:23,4:26:15.01:157,15,0	0/0:45,0:45:99:0,125,1419	0/1:33,3:36:99:572,0,141	1/1:19,4:21:0.44:411,0,0	1/1:11,2:13:5.73:91,6,0	0/0:22,0:22:23.58:0,24,197	0/0:29,0:29:60.07:0,60,709	0/0:26,0:26:48.13:0,48,593	1/1:31,3:34:20.98:236,21,0	0/1:26,2:28:99:409,0,122	0/1:22,1:23:89.76:169,0,90	0/1:16,1:17:32.12:109,0,32	0/0:20,0:17:46.83:0,47,561	0/0:19,0:19:54.16:0,54,653	0/0:23,0:23:54.16:0,54,678	0/0:27,0:27:57.13:0,57,701	0/0:24,0:24:39.09:0,39,506	0/0:33,0:32:45.36:0,45,535	0/0:43,0:43:99:0,105,1313	0/1:37,1:38:62.76:63,0,833	0/0:25,0:25:50.25:0,50,617	0/0:24,0:22:12.52:0,13,205
chr10	37079884	.	TA	T	1547.87	PASS	AB=0.957;AC=14;AF=0.250;AN=56;BaseQRankSum=5.283;DP=735;FS=0.000;HRun=1;HaplotypeScore=229.9981;InbreedingCoeff=0.3433;MQ=50.51;MQ0=7;MQRankSum=1.713;QD=6.05;ReadPosRankSum=0.367;VQSLOD=0.0276;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:10.15:0,10,66	0/0:12,0:12:24.05:0,24,320	0/0:13,0:6:18.06:0,18,282	0/0:15,0:8:24.08:0,24,381	0/1:22,0:22:19.47:19,0,51	1/1:28,0:28:39.45:324,39,0	1/1:23,3:25:2.93:59,3,0	0/0:48,0:48:69.24:0,69,1498	0/1:35,3:38:99:457,0,169	0/1:22,2:22:64.62:130,0,65	1/1:13,0:13:5.56:79,6,0	0/0:22,0:22:10.76:0,11,159	0/0:28,0:28:57.02:0,57,654	0/0:24,0:24:38.99:0,39,487	1/1:35,0:35:15.69:136,16,0	0/1:25,2:27:99:307,0,147	0/1:24,1:25:99:134,0,108	0/1:18,0:18:56.54:70,0,57	0/0:18,0:15:39.13:0,39,572	0/0:19,0:19:54.12:0,54,688	0/0:24,0:24:51.07:0,51,690	0/0:27,0:27:56.58:0,57,728	0/0:25,0:25:35.48:0,35,377	0/0:33,0:32:44.58:0,45,486	0/0:44,0:44:99:0,105,1425	0/0:37,0:37:62.08:0,62,1410	0/0:28,0:28:50.97:0,51,592	0/0:25,0:23:27.07:0,27,406
chr10	37079888	.	TAGATAGAC	T	1936	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=2.493;DP=744;FS=14.605;HRun=0;HaplotypeScore=297.7114;InbreedingCoeff=0.8348;MQ=51.10;MQ0=6;MQRankSum=-3.652;QD=9.54;ReadPosRankSum=-1.770;VQSLOD=0.9209;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:8,27:36:9:135,9,0	0/0:9,0:9:16.81:0,17,184	0/0:17,0:10:30.10:0,30,868	0/0:15,0:8:24.08:0,24,746	0/0:22,0:22:20.02:0,20,189	1/1:6,11:29:25.88:352,26,0	1/1:6,16:25:3.88:86,4,0	0/0:44,0:44:95.68:0,96,1611	0/0:35,0:37:99:0,100,895	1/1:6,15:24:62.86:1103,63,0	1/1:1,8:14:5.55:35,6,0	0/0:22,0:22:26.84:0,27,208	0/0:30,0:30:57.12:0,57,814	0/0:24,0:24:30.08:0,30,454	1/1:2,14:34:11.52:109,12,0	0/0:26,0:28:74.82:0,75,621	0/0:20,0:25:30.43:0,30,273	1/1:1,14:20:14.60:273,15,0	0/1:18,0:16:28.64:29,0,465	0/0:22,0:22:54.09:0,54,815	0/0:26,0:26:51.15:0,51,893	0/0:27,0:27:40.51:0,41,800	0/0:26,0:26:32.75:0,33,269	0/0:31,1:31:38.90:0,39,354	0/0:46,0:46:99:0,99,1608	0/0:34,0:34:99:0,102,3582	0/0:28,0:28:45.10:0,45,631	0/0:27,0:25:33.11:0,33,1113
chr10	37079892	.	TAGAC	T	9224.73	PASS	AB=1.000;AC=44;AF=0.786;AN=56;BaseQRankSum=8.815;DP=746;FS=1.497;HRun=0;HaplotypeScore=235.5005;InbreedingCoeff=0.5305;MQ=51.74;MQ0=7;MQRankSum=0.918;QD=14.21;ReadPosRankSum=5.535;VQSLOD=4.3899;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:35,0:35:6.01:62,6,0	1/1:10,0:10:11.92:110,12,0	0/0:20,0:12:36.07:0,36,617	0/0:19,0:12:29.23:0,29,630	1/1:5,17:22:18.49:258,18,0	1/1:28,0:28:14.31:219,14,0	1/1:26,0:25:2.97:32,3,0	0/1:41,0:41:73.74:649,0,74	1/1:32,5:37:90.28:1417,90,0	1/1:25,0:23:53.82:505,54,0	0/1:14,0:14:0.01:0,0,0	1/1:2,20:22:20.86:364,21,0	1/1:34,0:34:3.59:473,4,0	1/1:23,0:23:27.07:283,27,0	1/1:34,0:34:6:76,6,0	1/1:25,3:28:72.20:1104,72,0	1/1:21,4:25:24.02:320,24,0	1/1:19,0:19:11.28:78,11,0	0/1:17,0:15:16.17:181,0,16	1/1:24,0:24:26.11:473,26,0	0/1:26,0:26:33.89:280,0,34	1/1:27,0:27:5.13:416,5,0	1/1:5,20:25:20.92:365,21,0	1/1:9,21:31:21.01:365,21,0	1/1:45,0:45:40.21:806,40,0	0/0:36,0:36:99:0,99,2174	1/1:30,0:30:36.09:388,36,0	0/0:22,0:20:33.08:0,33,690
chr10	37079904	.	CAGAT	C	10083.01	PASS	AB=1.000;AC=37;AF=0.661;AN=56;BaseQRankSum=7.642;DP=717;FS=3.905;HRun=0;HaplotypeScore=221.1975;InbreedingCoeff=0.3404;MQ=55.72;MQ0=7;MQRankSum=-2.312;QD=16.83;ReadPosRankSum=7.186;VQSLOD=4.2526;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:33,0:33:5.52:27,6,0	1/1:0,8:8:14.96:218,15,0	0/0:26,0:19:36.21:0,36,930	0/0:21,0:14:42.12:0,42,856	0/1:22,0:22:29.50:95,0,30	0/1:23,0:23:3.25:95,0,3	0/1:24,0:23:3.24:3,0,63	1/1:5,32:37:16.33:1352,16,0	1/1:36,0:36:61.50:653,61,0	1/1:22,0:20:25.25:133,25,0	0/0:14,0:14:2.99:0,3,25	0/1:23,0:23:45.14:189,0,45	1/1:2,33:35:44.60:834,45,0	1/1:0,23:23:27.09:502,27,0	0/1:31,0:31:15.07:32,0,15	1/1:29,0:29:17.97:452,18,0	0/1:22,0:22:25.60:108,0,26	0/1:19,0:19:4.62:5,0,28	1/1:2,15:17:45:573,45,0	1/1:0,26:26:48.16:893,48,0	1/1:4,22:26:30.10:558,30,0	1/1:1,22:23:42.14:781,42,0	0/1:22,0:22:22.12:164,0,22	0/1:29,0:28:0.49:169,0,0	1/1:3,41:44:84.29:1564,84,0	0/0:35,0:35:96.31:0,96,2342	1/1:0,25:25:38.92:682,39,0	0/0:21,0:19:42.09:0,42,846
chr10	37080061	.	CACGCGCGCGCGCGCAT	C	5341.70	PASS	AB=1.000;AC=24;AF=0.429;AN=56;BaseQRankSum=10.580;DP=645;FS=4.339;HRun=0;HaplotypeScore=296.8920;InbreedingCoeff=0.7375;MQ=54.91;MQ0=3;MQRankSum=-9.991;QD=17.12;ReadPosRankSum=-0.828;VQSLOD=3.2526;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:87.30:0,87,4674	1/1:12,0:12:12.02:302,12,0	0/0:12,0:4:2.86:0,3,53	0/0:16,0:6:6.15:0,6,77	0/0:24,0:24:66.21:0,66,3362	0/0:20,0:20:30.10:0,30,1478	0/0:30,0:30:50.98:0,51,2651	1/1:43,0:43:8.27:1217,8,0	0/0:22,0:22:60.19:0,60,3091	0/0:22,0:22:54.05:0,54,2938	0/0:11,0:11:21.07:0,21,1307	1/1:24,0:24:22.06:503,22,0	1/1:25,0:25:32.14:828,32,0	1/1:32,0:32:21.91:392,22,0	0/0:14,0:14:12.04:0,12,675	0/0:21,0:21:51.17:0,51,2926	0/0:25,0:25:48.16:0,48,2767	0/0:33,0:33:72.25:0,72,4334	0/1:14,0:14:42.46:425,0,42	1/1:19,1:20:11.85:277,12,0	1/1:40,0:40:3.46:46,3,0	1/1:16,1:17:6:166,6,0	1/1:11,0:11:6.01:80,6,0	0/1:23,0:23:99:103,0,147	1/1:27,3:30:28.38:569,28,0	0/0:22,0:21:63.21:0,63,3895	1/1:19,2:20:23.02:432,23,0	0/0:23,0:23:66.23:0,66,4362
chr10	37080063	.	CGCGCGCGCGCGCAT	C	9258.69	PASS	AB=0.732;AC=24;AF=0.429;AN=56;BaseQRankSum=-0.854;DP=629;FS=3.897;HRun=0;HaplotypeScore=256.7659;InbreedingCoeff=0.7821;MQ=55.62;MQ0=3;MQRankSum=-9.554;QD=32.72;ReadPosRankSum=-1.579;VQSLOD=3.8163;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:87.30:0,87,4102	1/1:0,11:11:12.03:497,12,0	0/0:11,0:3:2.85:0,3,53	0/0:16,0:6:12.97:0,13,133	0/0:26,0:26:66.01:0,66,2944	0/0:20,0:20:30.10:0,30,1338	0/0:31,0:31:51.13:0,51,2241	1/1:0,36:36:95.97:2327,96,0	0/0:21,0:21:60.19:0,60,2698	0/0:24,0:24:47.22:0,47,2751	0/0:13,0:13:27.09:0,27,1221	1/1:19,2:21:30.07:812,30,0	1/1:0,24:24:33.11:1349,33,0	1/1:0,30:30:24.55:785,25,0	0/0:16,0:16:12.04:0,12,604	0/0:21,0:21:51.17:0,51,2542	0/0:25,0:25:48.16:0,48,2407	0/0:36,0:36:75.26:0,75,3803	1/1:0,12:12:35.84:792,36,0	1/1:1,17:19:11.66:387,12,0	0/1:1,35:36:81.18:89,0,81	1/1:1,16:17:6.01:264,6,0	1/1:10,0:10:6.01:107,6,0	0/1:21,1:22:99:155,0,112	1/1:4,25:29:30.10:973,30,0	0/0:23,0:22:69.23:0,69,3819	1/1:2,14:16:24:723,24,0	0/0:24,0:24:69.24:0,69,4048
chr10	37080074	.	G	GCA	4491.26	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=-3.874;DP=639;FS=4.395;HRun=0;HaplotypeScore=181.6960;InbreedingCoeff=0.3623;MQ=53.48;MQ0=2;MQRankSum=8.556;QD=14.30;ReadPosRankSum=6.995;VQSLOD=4.4600;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:36,0:36:23.44:582,23,0	0/0:11,0:11:11.37:0,11,58	0/0:13,0:4:9.41:0,9,67	0/0:21,0:5:4.44:0,4,46	1/1:10,13:23:37.79:678,38,0	0/1:16,0:16:37.29:96,0,37	0/1:32,0:32:76.87:244,0,77	0/0:37,0:37:72.08:0,72,397	1/1:3,17:20:28.90:652,29,0	0/1:27,0:27:36.43:222,0,36	0/1:15,0:15:42.16:149,0,42	0/1:21,0:21:9.32:9,0,54	0/0:25,0:25:31.39:0,31,162	0/0:30,0:30:22.81:0,23,117	0/1:14,0:14:15.58:73,0,16	1/1:6,18:24:7.20:595,7,0	1/1:4,22:27:39.13:633,39,0	1/1:34,0:34:15.95:533,16,0	0/0:14,0:14:25.83:0,26,143	0/0:19,0:19:11.34:0,11,63	0/0:36,0:36:5.80:0,6,34	0/0:18,0:18:5.67:0,6,29	0/0:9,0:9:2.50:0,2,9	0/1:25,0:25:9.82:25,0,10	0/0:31,0:31:28.55:0,29,148	0/0:24,0:23:68.96:0,69,873	0/0:16,0:15:17:0,17,91	0/0:21,0:21:63.17:0,63,871
chr10	37080075	.	CAT	C	1048.76	PASS	AB=1.000;AC=32;AF=0.571;AN=56;BaseQRankSum=5.534;DP=647;FS=10.646;HRun=0;HaplotypeScore=194.6203;InbreedingCoeff=0.1950;MQ=53.49;MQ0=2;MQRankSum=-5.171;QD=2.11;ReadPosRankSum=-2.254;VQSLOD=1.1101;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:39,0:39:9.58:10,0,111	1/1:11,0:11:2.22:35,2,0	0/0:14,0:5:12.51:0,13,217	0/0:22,0:6:15.34:0,15,177	0/1:23,0:23:29.34:47,0,29	0/1:16,0:16:9.48:9,0,31	0/1:33,0:33:17.52:18,0,62	1/1:36,1:37:45.40:274,45,0	0/0:20,0:20:20.35:0,20,74	0/1:28,0:28:55.94:56,0,59	0/0:15,0:15:24.08:0,24,109	1/1:21,0:21:22.68:121,23,0	1/1:25,0:25:6.48:117,6,0	1/1:30,0:30:10.37:64,10,0	0/1:14,0:14:11.72:37,0,12	0/1:24,0:24:21.87:53,0,22	0/1:27,0:27:6.55:47,0,7	0/0:34,0:34:50.35:0,50,214	1/1:13,1:14:7.78:60,8,0	1/1:19,0:19:5.83:35,6,0	0/1:36,0:36:12.45:12,0,51	1/1:17,1:18:5.55:32,6,0	1/1:9,0:9:2.84:14,3,0	0/1:25,0:25:7.88:21,0,8	1/1:29,2:31:16.28:116,16,0	0/0:24,0:23:72.21:0,72,1266	1/1:16,0:15:6.28:57,6,0	0/0:22,0:22:66.16:0,66,1139
chr10	37081457	.	GAC	G	4587.19	PASS	AB=0.933;AC=15;AF=0.268;AN=56;BaseQRankSum=7.001;DP=569;FS=6.384;HRun=0;HaplotypeScore=85.2411;InbreedingCoeff=0.9070;MQ=65.05;MQ0=7;MQRankSum=-0.819;QD=26.98;ReadPosRankSum=2.504;VQSLOD=6.1962;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,27:33:72.23:916,72,0	0/0:11,0:11:33.11:0,33,552	0/0:23,0:14:20.23:0,20,369	0/0:25,0:16:28.13:0,28,407	0/0:8,0:30:78.04:0,78,736	1/1:5,24:29:60.19:764,60,0	1/1:1,14:15:39.12:496,39,0	0/0:31,0:31:78.27:0,78,1304	0/0:3,0:14:32.72:0,33,290	1/1:2,25:26:72.23:917,72,0	1/1:2,21:23:42.13:535,42,0	0/0:12,0:12:36.12:0,36,602	0/0:18,1:19:12.99:0,13,765	0/0:21,0:21:57.18:0,57,926	1/1:0,14:14:42.13:535,42,0	0/1:2,1:14:5.16:5,0,234	0/0:2,0:25:66.04:0,66,586	1/1:2,12:13:33.11:420,33,0	0/0:15,0:15:36.12:0,36,601	0/0:20,0:20:60.19:0,60,977	0/0:26,0:26:75.07:0,75,1192	0/0:12,0:12:27.09:0,27,452	0/0:13,0:13:36.12:0,36,602	0/0:15,2:17:6.95:0,7,607	0/0:25,0:24:63.22:0,63,1054	0/0:19,0:19:54.18:0,54,899	0/0:22,1:23:16:0,16,803	0/0:16,0:16:48.16:0,48,803
chr10	37081782	.	CTTG	C	13511.84	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=17.822;DP=761;FS=6.164;HRun=0;HaplotypeScore=110.1309;InbreedingCoeff=0.9995;MQ=82.90;MQ0=0;MQRankSum=-5.628;QD=40.21;ReadPosRankSum=1.899;VQSLOD=5.7147;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:96.25:0,96,2053	1/1:1,8:9:24.08:392,24,0	0/0:20,0:20:24.70:0,25,917	0/0:27,0:27:74.42:0,74,1400	0/0:25,0:26:75.02:0,75,1554	0/0:22,0:22:60.21:0,60,1305	0/0:19,0:19:51.18:0,51,1121	1/1:5,26:32:81.28:1313,81,0	0/0:30,0:30:84.27:0,84,1803	0/0:29,0:29:87.29:0,87,1892	0/0:31,0:31:93.32:0,93,2019	1/1:1,27:28:72.25:1163,72,0	1/1:1,30:31:75.26:1223,75,0	1/1:2,21:23:45.15:734,45,0	0/0:44,0:44:99:0,126,2795	0/0:22,0:22:66.23:0,66,1472	0/0:39,0:39:99:0,117,2570	0/0:34,0:34:99:0,99,2074	1/1:6,17:23:48.13:755,48,0	1/1:0,21:21:63.21:1005,63,0	1/1:3,39:42:93.14:1494,93,0	1/1:2,26:28:69.24:1125,69,0	1/1:1,18:19:51.17:832,51,0	1/1:1,34:35:87.30:1420,87,0	1/1:1,20:21:60.20:979,60,0	0/0:33,0:33:87.30:0,87,1923	1/1:0,24:24:66.23:1076,66,0	0/0:16,0:16:42.14:0,42,934
chr10	37083536	.	G	GA	5875.01	PASS	AB=0.805;AC=26;AF=0.464;AN=56;BaseQRankSum=-10.441;DP=605;FS=1.564;HRun=10;HaplotypeScore=80.1767;InbreedingCoeff=0.8367;MQ=76.60;MQ0=0;MQRankSum=2.517;QD=17.54;ReadPosRankSum=2.570;VQSLOD=5.5277;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,56:67:55.97:999,56,0	0/0:6,0:8:14:0,14,101	0/0:18,0:18:23.95:0,24,174	0/0:13,0:14:16.78:0,17,113	1/1:5,17:22:50.75:466,51,0	1/1:5,13:18:27.33:439,27,0	1/1:4,24:29:26.44:513,26,0	0/0:21,1:23:35.65:0,36,374	0/1:9,16:25:6.13:384,0,6	1/1:5,17:23:45.06:454,45,0	1/1:6,15:21:8.53:337,9,0	0/0:23,0:24:55.92:0,56,443	0/0:16,0:17:40.98:0,41,326	0/0:23,0:23:53.78:0,54,432	1/1:4,20:24:48.12:512,48,0	1/1:4,19:24:38.93:398,39,0	1/1:3,23:26:24.65:540,25,0	1/1:2,17:19:42.11:448,42,0	0/0:13,0:13:26.69:0,27,207	0/0:24,0:25:37.12:0,37,397	0/0:17,1:19:14.91:0,15,308	0/0:27,0:27:19.04:0,19,365	0/1:14,0:15:33.15:33,0,139	0/0:25,0:25:62.81:0,63,500	0/0:16,0:16:8.80:0,9,195	1/1:4,8:13:26.91:255,27,0	0/0:16,0:18:45.99:0,46,353	1/1:2,7:9:8.89:96,9,0
chr10	37084174	.	G	GT	5868.89	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=10.518;DP=690;FS=2.354;HRun=1;HaplotypeScore=142.7644;InbreedingCoeff=0.9797;MQ=91.49;MQ0=0;MQRankSum=-6.374;QD=32.42;ReadPosRankSum=1.300;VQSLOD=4.6278;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,34:39:95.59:1157,96,0	0/0:9,0:9:24.08:0,24,309	0/0:32,0:32:78.22:0,78,998	0/0:26,0:26:74.06:0,74,862	0/0:17,0:16:42.14:0,42,545	1/1:3,11:14:38.99:460,39,0	1/1:9,25:34:84.22:973,84,0	0/0:26,0:26:75.23:0,75,943	0/0:30,0:30:78.25:0,78,1005	1/1:4,18:23:69.13:817,69,0	1/1:1,10:11:32.95:397,33,0	0/0:42,0:42:99:0,123,1550	0/0:29,0:29:84.26:0,84,1075	0/0:21,0:21:60.19:0,60,778	1/1:2,35:37:99:1318,108,0	0/0:25,0:25:69.21:0,69,881	0/0:34,0:34:99:0,99,1270	1/1:2,21:23:60.19:747,60,0	0/0:27,0:27:75.23:0,75,957	0/0:14,0:14:36.12:0,36,467	0/0:45,0:45:99:0,129,1628	0/0:10,0:10:30.10:0,30,389	0/0:15,0:15:42.12:0,42,529	0/0:28,0:28:84.27:0,84,1090	0/0:23,0:23:63.19:0,63,804	0/0:17,1:18:5.78:0,6,505	0/0:23,0:23:69.21:0,69,881	0/0:15,0:15:42.14:0,42,545
chr10	37084175	.	TG	T	2282.22	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=17.365;DP=680;FS=4.411;HRun=2;HaplotypeScore=150.2001;InbreedingCoeff=0.9990;MQ=90.44;MQ0=0;MQRankSum=-6.324;QD=12.82;ReadPosRankSum=1.200;VQSLOD=2.8325;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:36,1:37:92.64:528,93,0	0/0:9,0:9:24.08:0,24,379	0/0:29,0:29:84.27:0,84,1307	0/0:26,0:26:69.35:0,69,1086	0/0:17,0:16:42.14:0,42,671	1/1:11,2:13:36.57:191,37,0	1/1:25,7:32:75.77:368,76,0	0/0:26,0:26:78.25:0,78,1201	0/0:28,0:28:81.28:0,81,1281	1/1:21,2:23:61.04:328,61,0	1/1:10,0:11:23.68:154,24,0	0/0:42,0:42:99:0,126,1981	0/0:28,0:28:84.29:0,84,1340	0/0:21,0:21:63.20:0,63,983	1/1:38,0:38:99:584,106,0	0/0:25,0:25:69.24:0,69,1103	0/0:33,0:33:99:0,99,1582	1/1:23,1:24:60.19:330,60,0	0/0:27,0:27:78.26:0,78,1215	0/0:14,0:14:36.12:0,36,575	0/0:45,0:45:99:0,135,2042	0/0:10,0:10:30.10:0,30,480	0/0:16,0:16:45.13:0,45,693	0/0:29,0:29:87.27:0,87,1362	0/0:21,0:21:63.21:0,63,1003	0/0:19,0:19:30.77:0,31,680	0/0:23,0:23:69.24:0,69,1102	0/0:14,0:14:42.14:0,42,667
chr10	37084176	.	G	GT	5662.83	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=12.225;DP=690;FS=2.326;HRun=1;HaplotypeScore=144.5514;InbreedingCoeff=0.9883;MQ=89.91;MQ0=0;MQRankSum=-6.956;QD=30.12;ReadPosRankSum=0.969;VQSLOD=4.6676;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,32:39:98.44:1193,98,0	0/0:9,0:9:24.08:0,24,310	0/0:28,0:28:84.23:0,84,1038	0/0:27,0:27:77.15:0,77,912	0/0:17,0:16:42.14:0,42,545	1/1:4,11:15:39.55:459,40,0	1/1:9,25:34:86.77:942,87,0	0/0:25,0:25:72.18:0,72,861	0/0:27,0:27:81.24:0,81,1029	1/1:7,19:26:68.57:778,69,0	1/1:4,7:11:28.77:262,29,0	0/0:41,0:41:99:0,120,1551	0/0:29,0:29:84.25:0,84,1073	0/0:21,0:21:63.19:0,63,803	1/1:5,34:39:99:1334,114,0	0/0:26,0:26:69.20:0,69,880	0/0:33,0:33:99:0,99,1284	1/1:2,22:24:60.22:695,60,0	0/0:28,0:28:78.18:0,78,959	0/0:14,0:14:36.12:0,36,467	0/0:45,0:45:99:0,129,1642	0/0:10,0:10:30.10:0,30,390	0/0:16,0:16:45.12:0,45,567	0/0:29,0:29:87.22:0,87,1093	0/0:21,0:21:63.19:0,63,804	0/0:17,1:18:8.76:0,9,520	0/0:24,0:24:69.22:0,69,894	0/0:14,0:14:42.10:0,42,514
chr10	37084256	.	A	AC	13373.02	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-13.844;DP=728;FS=0.000;HRun=1;HaplotypeScore=84.9735;InbreedingCoeff=0.9981;MQ=88.21;MQ0=0;MQRankSum=-3.769;QD=43.56;ReadPosRankSum=2.755;VQSLOD=4.6575;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,43:44:99:1772,111,0	0/0:10,0:10:30.07:0,30,399	0/0:26,0:26:75.20:0,75,999	0/0:31,0:32:83.43:0,83,1042	1/1:0,22:21:54.18:859,54,0	1/1:0,21:21:60.20:955,60,0	1/1:0,43:43:99:1817,114,0	0/0:31,0:31:93.30:0,93,1286	1/1:0,28:28:84.29:1342,84,0	1/1:1,21:22:60.20:956,60,0	1/1:0,8:8:21.07:335,21,0	0/0:40,0:40:99:0,120,1676	0/0:34,0:34:99:0,102,1423	0/0:25,0:25:72.24:0,72,1005	1/1:1,32:33:96.31:1503,96,0	1/1:0,26:26:75.26:1198,75,0	1/1:2,28:30:78.27:1246,78,0	1/1:0,30:30:87.30:1389,87,0	0/0:17,0:17:51.17:0,51,713	0/0:11,0:11:30.10:0,30,419	0/0:54,0:54:99:0,157,2163	0/0:18,0:18:48.16:0,48,671	0/0:19,0:19:48.16:0,48,671	0/0:29,1:30:42.34:0,42,1168	0/0:16,0:16:48.16:0,48,671	0/0:28,0:28:84.28:0,84,1174	0/0:24,0:23:72.24:0,72,1006	0/0:6,0:6:18.06:0,18,252
chr10	37084544	.	A	AAAAAAAG	24935.16	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-4.101;DP=548;FS=7.595;HRun=0;HaplotypeScore=122.3331;InbreedingCoeff=0.8819;MQ=42.19;MQ0=9;MQRankSum=-8.461;QD=49.67;ReadPosRankSum=-1.070;VQSLOD=4.3100;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,18:29:66.23:2201,66,0	1/1:7,1:9:18.06:519,18,0	0/0:8,0:5:9.03:0,9,201	0/0:8,0:5:15.02:0,15,225	1/1:8,11:19:33.58:838,34,0	1/1:7,8:15:30.10:1077,30,0	1/1:13,13:26:33.11:1174,33,0	1/1:26,7:32:42.10:1203,42,0	1/1:13,8:21:36.12:1264,36,0	1/1:13,4:17:33.11:1088,33,0	1/1:12,4:16:23.76:709,24,0	1/1:8,15:26:51.02:1807,51,0	1/1:11,6:17:27.09:866,27,0	1/1:12,10:24:27.09:963,27,0	1/1:6,6:14:24.08:864,24,0	1/1:10,12:21:33.11:1184,33,0	1/1:16,8:24:36.12:1163,36,0	1/1:17,7:23:36.12:1229,36,0	1/1:13,7:19:21.07:654,21,0	1/1:13,11:24:42.14:1409,42,0	1/1:7,4:10:15.05:442,15,0	1/1:20,4:24:27.09:922,27,0	1/1:12,9:21:36.12:1133,36,0	1/1:9,7:16:12.51:412,13,0	1/1:9,12:21:6.15:901,6,0	0/0:28,0:27:63.21:0,63,1388	1/1:11,9:20:27.09:915,27,0	0/0:2,0:2:3.01:0,3,69
chr10	37085629	.	CTGTGTGTG	C	192.91	PASS	AB=0.969;AC=10;AF=0.263;AN=38;BaseQRankSum=2.502;DP=687;FS=26.190;HRun=0;HaplotypeScore=181.7255;InbreedingCoeff=0.3312;MQ=66.26;MQ0=24;MQRankSum=-2.942;QD=1.03;ReadPosRankSum=-1.221;VQSLOD=0.8950;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:37:0:0,0,0	0/0:10,0:10:3.01:0,3,68	./.	./.	./.	0/0:26,0:26:6.38:0,6,58	0/1:34,3:36:55.91:64,0,56	0/0:24,0:24:0:0,0,0	./.	0/1:19,0:20:0.88:10,0,1	./.	0/0:32,0:31:14.87:0,15,469	./.	0/1:31,0:31:0:0,0,0	./.	1/1:19,0:21:3.01:37,3,0	0/0:35,0:34:0.47:0,0,2	0/0:28,0:27:3.90:0,4,39	0/0:19,0:18:3.01:0,3,67	./.	0/1:37,0:35:0.02:0,0,0	1/1:22,4:23:3.01:74,3,0	0/0:13,0:13:5.75:0,6,213	0/0:44,0:43:26.80:0,27,877	./.	0/0:25,0:25:9.89:0,10,122	1/1:12,3:15:5.41:111,5,0	0/0:6,0:5:3.01:0,3,55
chr10	37086511	.	GA	G	4677.20	PASS	AB=0.957;AC=22;AF=0.393;AN=56;BaseQRankSum=-6.517;DP=687;FS=9.905;HRun=11;HaplotypeScore=94.3004;InbreedingCoeff=0.8309;MQ=71.22;MQ0=4;MQRankSum=-4.005;QD=15.19;ReadPosRankSum=6.129;VQSLOD=4.4601;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,36:43:60.90:706,61,0	0/0:4,0:9:17.34:0,17,100	0/1:29,3:24:25.36:25,0,270	0/1:20,0:15:1.21:1,0,123	0/0:20,2:22:32.47:0,32,535	1/1:3,19:21:55.96:448,56,0	1/1:4,23:27:36.68:503,37,0	0/0:7,0:31:60.77:0,61,322	0/0:19,0:20:56.96:0,57,581	1/1:4,27:31:74.53:608,75,0	1/1:3,12:15:1.11:213,1,0	1/1:0,22:22:56.93:467,57,0	0/0:3,0:23:17.93:0,18,88	0/0:2,0:23:14.68:0,15,72	1/1:4,15:18:38.94:320,39,0	0/0:21,0:21:54.14:0,54,574	0/0:31,2:32:31.89:0,32,740	1/1:3,18:21:53.93:443,54,0	0/0:6,0:39:72.84:0,73,415	0/0:7,0:22:40.15:0,40,203	0/0:2,1:31:12.49:0,12,146	0/0:2,0:19:31.49:0,31,164	1/1:4,16:20:32.80:271,33,0	1/1:2,32:35:82.94:671,83,0	0/0:6,0:21:11.94:0,12,62	0/0:6,1:25:20.27:0,20,214	0/0:2,0:30:27.22:0,27,134	0/0:2,0:9:14.20:0,14,71
chr10	37089215	.	T	TTTG	9525.28	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-14.541;DP=750;FS=2.418;HRun=0;HaplotypeScore=112.0443;InbreedingCoeff=0.9949;MQ=63.95;MQ0=5;MQRankSum=-2.998;QD=39.69;ReadPosRankSum=0.563;VQSLOD=6.0152;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:87.26:0,87,1219	1/1:4,5:9:12.04:246,12,0	0/0:30,0:19:28.30:0,28,350	0/0:28,0:17:26.38:0,26,323	0/0:34,0:34:87.26:0,87,1209	0/0:23,0:23:60.19:0,60,856	0/0:27,0:27:54.18:0,54,782	1/1:10,25:34:69.21:1314,69,0	0/0:26,0:26:72.22:0,72,1010	0/0:28,0:28:63.21:0,63,913	0/0:27,0:27:72.19:0,72,985	0/0:18,0:18:51.11:0,51,698	1/1:6,24:31:57.19:1155,57,0	1/1:3,18:22:36.12:737,36,0	0/0:30,0:30:63.20:0,63,897	0/0:31,0:31:87.28:0,87,1245	0/0:38,0:38:71.56:0,72,1285	0/0:40,0:40:96.26:0,96,1303	1/1:17,13:29:69.19:1252,69,0	1/1:2,20:22:54.18:1098,54,0	1/1:6,15:21:30.10:614,30,0	1/1:6,15:20:38.99:798,39,0	0/0:22,0:22:45.13:0,45,618	0/0:33,0:33:87.27:0,87,1242	1/1:8,14:22:54.17:1041,54,0	0/0:29,0:29:69.20:0,69,923	1/1:13,13:27:69.19:1271,69,0	0/0:11,0:11:30.10:0,30,436
chr10	37089243	.	G	GT	4468.41	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-12.523;DP=712;FS=1.568;HRun=9;HaplotypeScore=91.8172;InbreedingCoeff=0.9804;MQ=62.86;MQ0=12;MQRankSum=3.873;QD=22.23;ReadPosRankSum=1.840;VQSLOD=5.3967;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,24:34:71.56:721,72,0	0/0:8,0:8:17.97:0,18,152	0/0:30,0:14:20.17:0,20,167	0/0:25,0:12:8.89:0,9,68	0/0:27,0:27:74.94:0,75,640	1/1:2,23:25:63.17:697,63,0	1/1:6,22:28:34.50:592,34,0	0/0:22,0:21:38.94:0,39,332	0/0:24,1:25:20.78:0,21,410	1/1:5,20:25:60.09:621,60,0	1/1:7,18:25:25:489,25,0	0/0:14,0:14:29.96:0,30,260	0/0:24,0:24:53.92:0,54,461	0/0:19,0:19:32.96:0,33,282	1/1:9,19:29:25.42:487,25,0	0/0:27,1:28:44.79:0,45,613	0/0:43,0:43:99:0,117,1010	1/1:7,27:35:67.97:863,68,0	0/0:31,1:31:35.16:0,35,516	0/0:28,0:28:68.61:0,69,594	0/0:19,1:20:17.82:0,18,380	0/0:24,0:23:43.30:0,43,446	0/0:17,0:17:32.09:0,32,375	0/0:31,0:31:71.96:0,72,621	0/0:22,1:23:14.77:0,15,357	0/0:28,1:29:47.80:0,48,643	0/0:30,0:30:71.93:0,72,614	0/0:12,0:12:26.96:0,27,228
chr10	37089327	.	GT	G	1633.15	PASS	AB=0.810;AC=13;AF=0.232;AN=56;BaseQRankSum=1.347;DP=676;FS=0.000;HRun=13;HaplotypeScore=81.1961;InbreedingCoeff=0.3250;MQ=62.20;MQ0=21;MQRankSum=1.900;QD=6.64;ReadPosRankSum=3.336;VQSLOD=2.6427;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,2:31:8.28:0,8,514	0/0:4,0:8:18.77:0,19,129	0/1:34,1:13:4.23:4,0,93	0/0:30,0:11:2.24:0,2,82	0/0:33,2:35:24.70:0,25,697	0/1:18,3:21:20.34:20,0,291	0/1:11,2:13:13.46:13,0,199	0/0:19,0:30:40.52:0,41,238	0/0:7,0:8:20.87:0,21,189	0/1:18,3:19:29.63:30,0,227	0/0:16,2:18:19.97:0,20,323	0/1:5,15:21:32.66:263,0,33	0/0:3,0:11:14.26:0,14,74	0/0:15,0:17:35.29:0,35,226	0/0:28,0:28:72.05:0,72,682	0/0:24,1:25:19.38:0,19,502	0/0:35,0:36:76.41:0,76,727	0/1:23,2:26:0.60:1,0,498	0/0:12,0:26:50.04:0,50,290	0/0:18,0:29:57.24:0,57,358	0/0:10,1:18:7.39:0,7,121	0/0:11,0:19:41.08:0,41,230	1/1:5,24:28:44.37:419,44,0	1/1:6,21:29:48.75:340,49,0	0/0:6,0:22:31.41:0,31,171	0/1:9,25:34:6.94:444,0,7	0/0:7,0:29:39.76:0,40,204	1/1:1,13:14:35.79:263,36,0
chr10	37094064	.	A	AACGC	5569.52	PASS	AB=0.815;AC=34;AF=0.607;AN=56;BaseQRankSum=-7.499;DP=484;FS=5.122;HRun=0;HaplotypeScore=89.6548;InbreedingCoeff=0.5805;MQ=54.87;MQ0=5;MQRankSum=-0.283;QD=16.00;ReadPosRankSum=1.622;VQSLOD=4.2395;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,11:20:8.65:150,9,0	1/1:2,3:4:5.95:90,6,0	0/0:17,0:10:6.01:0,6,73	0/1:19,0:11:3.03:3,0,37	0/0:8,0:8:11.52:0,12,133	0/1:5,7:12:33.40:275,0,33	1/1:19,19:41:26.66:597,27,0	1/1:11,0:11:9.01:110,9,0	0/0:16,0:16:30.10:0,30,466	1/1:7,8:16:30.09:578,30,0	1/1:6,0:5:2.68:18,3,0	0/0:20,0:20:45.04:0,45,576	0/1:6,6:12:33.38:275,0,33	1/1:3,15:20:27.09:644,27,0	1/1:9,15:24:20.67:507,21,0	0/0:12,0:12:30.09:0,30,459	0/0:37,0:37:66.17:0,66,966	1/1:7,17:25:27.09:651,27,0	1/1:13,2:13:9.03:170,9,0	1/1:4,1:4:3.01:72,3,0	1/1:10,20:30:27.09:652,27,0	1/1:4,4:8:2.93:72,3,0	0/0:9,0:9:12.03:0,12,168	0/1:45,1:46:41.13:41,0,1015	1/1:11,6:16:14.94:301,15,0	0/0:10,0:10:15.05:0,15,240	1/1:4,7:11:14.82:362,15,0	0/0:7,0:7:12.04:0,12,189
chr10	37098028	.	T	TC	1329.18	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-6.738;DP=713;FS=18.893;HRun=6;HaplotypeScore=70.2239;InbreedingCoeff=0.9884;MQ=88.34;MQ0=0;MQRankSum=-5.603;QD=28.90;ReadPosRankSum=2.226;VQSLOD=2.1479;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:81.17:0,81,825	0/0:8,0:8:21.03:0,21,208	0/0:25,0:25:75.02:0,75,725	0/0:31,0:31:81.01:0,81,775	0/0:16,0:16:39.08:0,39,397	0/0:24,0:24:63.14:0,63,642	0/0:30,0:30:81.16:0,81,818	0/0:25,0:25:54.10:0,54,545	0/0:24,0:24:72.16:0,72,734	0/0:19,0:19:51.11:0,51,520	0/0:21,0:21:60.13:0,60,612	0/0:28,0:28:81.18:0,81,825	0/0:18,0:18:54.12:0,54,551	0/0:30,0:30:84.17:0,84,848	0/0:51,0:51:99:0,135,1376	0/0:26,0:26:69.15:0,69,702	0/0:24,0:24:72.16:0,72,734	0/0:12,0:12:30.06:0,30,306	0/0:24,0:24:60.08:0,60,597	0/0:25,0:25:66.13:0,66,666	0/0:48,0:48:99:0,126,1281	0/0:26,0:26:72.13:0,72,721	0/0:23,0:23:69.15:0,69,702	0/0:24,0:24:69.14:0,69,696	0/0:24,0:24:66.14:0,66,667	1/1:3,26:29:50.68:950,51,0	0/0:27,0:27:75.17:0,75,763	1/1:4,13:17:14.53:497,15,0
chr10	37099375	.	AC	A	7513.84	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=9.243;DP=589;FS=13.875;HRun=1;HaplotypeScore=106.3139;InbreedingCoeff=0.9988;MQ=67.09;MQ0=0;MQRankSum=-6.623;QD=38.34;ReadPosRankSum=-0.940;VQSLOD=3.0232;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:42.14:0,42,607	1/1:0,9:9:27.09:376,27,0	0/0:7,0:7:21:0,21,246	0/0:13,0:13:23.30:0,23,275	0/0:32,0:32:96.31:0,96,1364	0/0:15,0:15:36.10:0,36,500	0/0:22,0:22:66.19:0,66,922	1/1:5,23:28:80.65:1035,81,0	0/0:19,0:19:57.11:0,57,786	0/0:16,0:16:48.16:0,48,715	0/0:20,0:20:60.17:0,60,828	0/0:33,0:33:99:0,99,1391	1/1:7,15:22:60.09:730,60,0	1/1:4,13:17:51.02:629,51,0	0/0:25,0:25:75.23:0,75,1057	0/0:18,0:18:54.17:0,54,770	0/0:35,0:35:99:0,105,1448	0/0:18,0:18:51.14:0,51,719	1/1:2,15:17:51.15:681,51,0	1/1:6,14:20:60.12:751,60,0	1/1:0,11:11:33.11:459,33,0	1/1:0,19:19:57.10:738,57,0	0/0:21,0:21:63.19:0,63,883	0/0:28,0:28:84.22:0,84,1147	1/1:0,28:28:84.24:1142,84,0	0/0:34,0:34:99:0,102,1408	1/1:4,21:25:75.16:973,75,0	0/0:20,0:20:54.18:0,54,823
chr10	37099408	.	C	CTTTA	27773.87	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-3.324;DP=690;FS=15.140;HRun=0;HaplotypeScore=115.4381;InbreedingCoeff=0.9643;MQ=78.64;MQ0=0;MQRankSum=-11.487;QD=61.18;ReadPosRankSum=-3.040;VQSLOD=4.6772;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,12:16:33.96:760,34,0	1/1:4,5:9:21.06:461,21,0	0/0:24,0:24:48.14:0,48,773	0/0:16,0:16:25.48:0,25,464	0/0:34,0:34:87.28:0,87,1590	1/1:3,16:20:33.11:875,33,0	1/1:2,16:23:51.18:1350,51,0	1/1:9,30:44:99:2897,117,0	0/0:23,0:23:60.21:0,60,1111	1/1:3,17:22:60.18:1436,60,0	1/1:1,15:17:45.15:1138,45,0	0/0:33,0:33:96.29:0,96,1690	1/1:2,19:24:53.97:1427,54,0	1/1:4,14:20:45.15:1164,45,0	1/1:2,20:23:63.22:1664,63,0	0/0:26,0:26:69.16:0,69,1218	0/0:36,0:36:99:0,105,1872	1/1:3,20:23:1.23:1383,1,0	1/1:0,14:16:45.15:1157,45,0	1/1:4,25:30:84.16:1931,84,0	1/1:1,13:15:33.07:798,33,0	1/1:3,20:25:66.22:1638,66,0	0/0:16,0:16:48.13:0,48,816	0/0:28,0:28:78.27:0,78,1448	1/1:7,19:30:72.25:1725,72,0	1/1:5,33:42:99:2739,114,0	1/1:6,16:25:63.17:1408,63,0	1/1:3,27:30:69.24:1823,69,0
chr10	37103888	.	CAAAAAAA	C	2076.81	PASS	AB=0.833;AC=17;AF=0.340;AN=50;BaseQRankSum=3.551;DP=336;FS=1.440;HRun=17;HaplotypeScore=78.1201;InbreedingCoeff=0.8365;MQ=47.84;MQ0=14;MQRankSum=-4.721;QD=25.33;ReadPosRankSum=4.369;VQSLOD=0.2432;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:38:90.10:0,90,2414	./.	0/0:7,0:3:9.03:0,9,160	0/0:5,0:3:6.49:0,6,139	0/0:9,0:8:18.06:0,18,498	0/0:10,0:10:27.09:0,27,715	0/0:13,0:13:36.12:0,36,1036	1/1:7,14:21:41.90:750,42,0	0/0:10,0:10:18.06:0,18,552	0/0:13,0:10:21.07:0,21,574	./.	0/0:11,0:12:30.06:0,30,861	1/1:0,7:7:8.54:178,9,0	1/1:1,10:11:18.02:358,18,0	0/0:14,0:13:33.11:0,33,974	0/0:17,0:16:30.10:0,30,942	0/0:20,0:21:45.49:0,45,1223	0/0:24,0:24:32.62:0,33,906	1/1:3,8:12:26.84:378,27,0	1/1:0,1:1:3.01:59,3,0	1/1:4,6:10:5.95:115,6,0	./.	0/0:6,0:5:12.51:0,13,297	0/0:20,0:21:34.48:0,34,989	1/1:1,3:4:6.02:119,6,0	0/0:5,0:14:6.86:0,7,32	1/1:5,6:10:14.93:298,15,0	0/1:4,0:3:0.07:0,0,0
chr10	37103943	.	TC	T	923.91	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=3.190;DP=365;FS=0.000;HRun=3;HaplotypeScore=46.2488;InbreedingCoeff=0.8610;MQ=59.24;MQ0=2;MQRankSum=0.736;QD=24.97;ReadPosRankSum=1.179;VQSLOD=2.8350;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:25:54.16:0,54,739	0/0:1,0:1:3.01:0,3,43	0/0:18,0:16:48.16:0,48,674	0/0:19,0:18:54.06:0,54,659	0/0:8,0:8:24.05:0,24,309	0/0:6,0:6:15.05:0,15,216	0/0:17,0:17:48.15:0,48,671	0/0:28,0:28:75.25:0,75,1078	0/0:8,0:8:24.08:0,24,346	0/0:8,0:8:24.07:0,24,314	0/0:4,0:4:12.02:0,12,153	1/1:1,11:12:30.09:371,30,0	0/0:6,0:6:12.04:0,12,172	0/0:14,0:14:32.92:0,33,428	0/0:17,0:16:45.15:0,45,647	0/0:21,0:21:60.05:0,60,759	0/0:25,0:25:63.17:0,63,866	0/0:23,0:23:63.21:0,63,906	0/0:12,0:10:24.08:0,24,345	0/0:8,0:8:24.07:0,24,327	0/0:18,0:18:45.15:0,45,644	0/0:4,0:3:9.02:0,9,111	1/1:0,5:5:9.03:112,9,0	1/1:2,18:20:48.11:577,48,0	0/0:4,0:4:12.04:0,12,173	0/0:8,0:8:21.06:0,21,285	0/0:19,0:19:51.01:0,51,706	0/0:6,0:6:18.06:0,18,257
chr10	37104474	.	C	CT	4778.37	PASS	AB=0.780;AC=18;AF=0.321;AN=56;BaseQRankSum=-3.756;DP=630;FS=0.000;HRun=10;HaplotypeScore=85.9195;InbreedingCoeff=0.7992;MQ=70.22;MQ0=3;MQRankSum=-1.209;QD=20.16;ReadPosRankSum=-0.525;VQSLOD=5.0818;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:13,32:45:70.63:849,71,0	0/0:3,0:12:6.12:0,6,27	0/1:9,0:9:13.96:16,0,14	0/0:15,0:14:18.43:0,18,150	0/0:37,0:37:92.83:0,93,759	0/1:6,22:28:10.83:500,0,11	1/1:4,18:22:10.86:524,11,0	0/0:2,0:27:48.11:0,48,139	0/0:10,0:10:29.96:0,30,246	1/1:9,12:20:39.68:432,40,0	1/1:5,11:16:33.08:348,33,0	0/0:14,1:15:7.21:0,7,264	0/0:1,0:13:18.33:0,18,53	0/0:3,0:11:14.25:0,14,41	1/1:5,20:24:53.74:576,54,0	0/0:29,0:29:80.88:0,81,664	0/0:42,0:42:99:0,105,847	1/1:6,14:20:11.45:327,11,0	0/0:6,0:21:27.20:0,27,78	0/0:4,0:23:12.55:0,13,71	0/0:4,0:24:33.24:0,33,104	0/0:2,0:21:34.41:0,34,99	0/0:17,0:17:35.93:0,36,293	0/0:34,0:33:86.88:0,87,714	0/0:3,0:20:30.33:0,30,87	1/1:6,24:30:50.51:729,51,0	0/0:2,0:19:32.59:0,33,94	1/1:3,18:21:45.11:479,45,0
chr10	37104762	.	T	TAGAC	5766.46	PASS	AB=0.927;AC=18;AF=0.321;AN=56;BaseQRankSum=13.951;DP=683;FS=2.933;HRun=0;HaplotypeScore=117.0069;InbreedingCoeff=0.5152;MQ=59.64;MQ0=6;MQRankSum=1.777;QD=19.29;ReadPosRankSum=7.743;VQSLOD=3.7214;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,21:31:39.12:950,39,0	0/0:9,0:9:27.06:0,27,430	0/0:36,0:27:78.20:0,78,1196	0/0:23,0:19:47.55:0,48,765	0/0:25,0:25:72.19:0,72,1241	1/1:1,18:21:23.55:584,24,0	0/1:5,17:22:7.94:135,0,8	0/0:38,0:38:93.27:0,93,1528	0/0:23,0:23:66.19:0,66,1125	1/1:7,21:28:48.51:1178,49,0	1/1:5,9:16:11.78:295,12,0	0/1:23,0:23:99:170,0,263	0/0:31,0:31:84.27:0,84,1483	0/0:20,0:20:51.13:0,51,820	1/1:3,35:39:48.06:1100,48,0	0/0:24,0:24:63.19:0,63,1115	0/0:22,0:22:59.98:0,60,832	1/1:4,19:23:25.02:592,25,0	0/0:23,0:21:60.03:0,60,915	0/0:26,0:26:78.24:0,78,1349	0/0:18,0:18:48.08:0,48,781	0/0:18,0:18:45.60:0,46,774	0/1:22,0:22:58.05:224,0,58	0/1:20,0:20:87.79:88,0,197	0/0:12,0:12:36.11:0,36,621	0/1:31,0:31:99:354,0,272	0/0:35,0:35:93.21:0,93,1537	0/1:22,0:20:78.42:98,0,78
chr10	37104766	.	T	TAGAC	8574.60	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=2.682;DP=681;FS=1.836;HRun=0;HaplotypeScore=109.6201;InbreedingCoeff=0.9646;MQ=59.32;MQ0=6;MQRankSum=1.939;QD=28.11;ReadPosRankSum=4.048;VQSLOD=4.9471;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:34,0:34:42.11:972,42,0	0/0:9,0:9:24.05:0,24,345	0/0:38,0:28:17.77:0,18,206	0/0:24,0:20:24.52:0,25,299	0/0:26,0:26:72.16:0,72,1069	1/1:19,0:19:24.08:585,24,0	1/1:18,0:18:10.19:164,10,0	0/0:35,0:35:66.12:0,66,922	0/0:23,0:23:45.15:0,45,743	1/1:29,0:29:69:1274,69,0	1/1:16,0:16:17.77:340,18,0	1/1:8,15:24:27.09:665,27,0	0/0:29,0:29:69.24:0,69,1137	0/0:18,0:18:36.08:0,36,520	1/1:41,0:40:54.02:1147,54,0	0/0:23,0:23:60.18:0,60,943	0/0:21,0:21:35.97:0,36,460	1/1:22,0:22:24.08:582,24,0	0/0:24,0:22:48.05:0,48,661	0/0:27,0:27:60.19:0,60,963	0/0:18,0:18:39.08:0,39,570	0/0:16,0:16:33.57:0,34,526	1/1:2,20:24:26.98:665,27,0	1/1:5,13:19:12.04:296,12,0	0/0:12,0:12:27.08:0,27,426	1/1:6,24:32:75:1529,75,0	0/0:33,0:33:72.16:0,72,1089	1/1:8,16:25:4.07:356,4,0
chr10	37104866	.	CCTCTCTCTCTCTCTCTCTCT	C	2274.35	PASS	AB=0.841;AC=20;AF=0.370;AN=54;BaseQRankSum=4.643;DP=565;FS=22.429;HRun=0;HaplotypeScore=274.2326;InbreedingCoeff=0.0044;MQ=69.79;MQ0=15;MQRankSum=-3.332;QD=7.43;ReadPosRankSum=-3.579;VQSLOD=0.8163;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:16:6.97:49,7,0	0/1:12,0:12:15.91:55,0,16	0/0:33,0:23:2.98:0,3,21	./.	0/0:25,0:26:18.04:0,18,563	0/1:12,0:24:99:366,0,102	0/0:10,0:10:6.30:0,6,24	0/1:32,0:38:17.37:57,0,17	0/0:13,0:15:15.42:0,15,327	0/1:18,0:19:65.73:124,0,66	0/0:12,0:13:3.38:0,3,18	0/0:16,0:21:15.07:0,15,636	1/1:5,14:19:1.07:405,1,0	0/1:8,10:18:16.37:153,0,16	0/1:26,0:27:99:130,0,113	0/0:21,0:21:29.70:0,30,421	0/0:20,0:19:20.87:0,21,424	0/1:19,0:19:32.40:32,0,61	1/1:17,0:18:1.99:138,2,0	0/1:8,8:16:0.91:220,0,1	0/1:12,0:11:9.19:9,0,33	0/1:12,4:16:5.13:5,0,6	0/0:13,0:18:11.39:0,11,363	0/0:20,0:23:23.89:0,24,544	0/1:5,6:10:7.72:144,0,8	0/0:26,0:26:17.43:0,17,956	1/1:9,12:21:12.04:542,12,0	0/1:15,0:15:2.85:3,0,374
chr10	37105953	.	T	TA	295.05	PASS	AB=0.793;AC=8;AF=0.148;AN=54;BaseQRankSum=3.081;DP=401;FS=0.000;HRun=0;HaplotypeScore=73.4990;InbreedingCoeff=0.1017;MQ=60.43;MQ0=16;MQRankSum=0.860;QD=3.04;ReadPosRankSum=3.003;VQSLOD=2.6900;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:21,7:22:53.29:53,0,64	./.	0/0:48,0:19:24.89:0,25,189	0/0:31,0:10:8.94:0,9,93	0/0:17,0:17:41.96:0,42,457	1/1:7,6:11:8.99:112,9,0	0/1:4,2:5:20.06:37,0,20	0/0:24,0:22:49.97:0,50,318	0/0:4,0:4:11.92:0,12,103	0/1:7,4:11:28.98:57,0,29	0/1:9,1:9:20.99:21,0,55	0/0:13,0:13:27.67:0,28,229	0/0:2,0:2:5.87:0,6,35	0/0:7,0:7:14.33:0,14,78	0/1:11,4:14:6.83:64,0,7	0/0:8,0:8:21.02:0,21,215	0/0:30,0:28:79.68:0,80,815	0/1:10,4:13:21.44:85,0,21	0/0:12,2:11:14.67:0,15,126	0/0:10,0:10:10.42:0,10,88	0/0:2,0:2:5.84:0,6,34	0/0:1,0:1:1.25:0,1,3	0/0:5,0:5:7.55:0,8,55	0/0:4,0:4:8.96:0,9,81	0/0:14,1:14:26.63:0,27,191	0/0:19,0:17:39.83:0,40,259	0/0:16,1:16:26.44:0,26,229	0/0:33,0:32:86.20:0,86,692
chr10	37105958	.	TTTA	T	1621.21	PASS	AB=0.967;AC=28;AF=0.500;AN=56;BaseQRankSum=2.396;DP=383;FS=31.666;HRun=0;HaplotypeScore=70.0527;InbreedingCoeff=0.2126;MQ=53.32;MQ0=17;MQRankSum=-3.534;QD=6.70;ReadPosRankSum=-0.771;VQSLOD=0.2113;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:22,7:23:15.32:280,15,0	1/1:1,0:1:3.01:31,3,0	0/0:37,0:13:10.29:0,10,162	0/0:29,0:9:12.61:0,13,143	0/0:19,0:19:2.23:0,2,491	1/1:6,6:10:26.26:238,26,0	1/1:4,1:4:8.76:61,9,0	0/1:24,0:22:69.92:70,0,130	0/0:3,0:3:8.89:0,9,99	1/1:8,3:11:23.97:216,24,0	1/1:9,1:9:17.24:183,17,0	0/0:12,0:12:35.22:0,35,475	0/0:2,0:2:0.89:0,1,2	0/1:6,0:6:4.49:45,0,4	1/1:11,3:13:22.29:183,22,0	0/0:8,0:8:20.94:0,21,403	0/0:28,0:26:61.69:0,62,1055	0/1:12,4:12:56.17:144,0,56	0/1:12,1:10:9.89:10,0,57	1/1:11,0:11:14.68:67,15,0	0/1:2,0:2:7.01:7,0,13	0/1:2,0:2:10.06:25,0,10	0/1:3,0:3:11.02:11,0,58	0/0:3,0:3:8.98:0,9,106	1/1:15,1:15:4.70:121,5,0	0/1:18,0:16:28.90:29,0,114	0/1:16,1:16:43.61:74,0,44	0/1:32,0:31:7.65:8,0,208
chr10	37105961	.	A	AT	3218.01	PASS	AB=0.667;AC=37;AF=0.661;AN=56;BaseQRankSum=0.206;DP=388;FS=8.118;HRun=9;HaplotypeScore=57.2864;InbreedingCoeff=0.7093;MQ=48.06;MQ0=19;MQRankSum=-5.953;QD=13.08;ReadPosRankSum=-0.594;VQSLOD=2.6261;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:16,14:24:7.69:252,8,0	1/1:0,1:1:3.01:31,3,0	0/0:33,0:10:14.25:0,14,74	0/0:29,0:9:10.19:0,10,65	0/0:18,0:18:26.12:0,26,215	1/1:7,4:9:26.28:270,26,0	1/1:1,3:3:9.02:99,9,0	1/1:14,13:24:36.57:397,37,0	0/0:3,0:3:3:0,3,26	1/1:10,4:14:20.42:203,20,0	1/1:4,5:8:18.03:182,18,0	0/0:12,0:12:23.04:0,23,206	1/1:2,1:3:2.94:18,3,0	1/1:2,4:6:10.84:104,11,0	1/1:9,5:13:20.65:171,21,0	0/0:8,0:8:21:0,21,182	0/0:28,0:26:53.95:0,54,460	0/1:8,8:12:6.45:147,0,6	1/1:11,2:9:9.02:98,9,0	1/1:5,7:12:14.73:150,15,0	1/1:1,1:2:3.01:33,3,0	1/1:2,0:2:3.01:30,3,0	0/0:6,0:6:2.99:0,3,26	0/0:4,0:4:5.95:0,6,44	1/1:6,10:15:26.35:250,26,0	1/1:8,9:15:13.68:222,14,0	1/1:6,11:16:35.03:319,35,0	1/1:21,11:31:29.57:434,30,0
chr10	37110230	.	AGTTT	A	6764.70	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=3.663;DP=691;FS=2.006;HRun=0;HaplotypeScore=130.0198;InbreedingCoeff=0.9803;MQ=83.32;MQ0=0;MQRankSum=-4.905;QD=36.17;ReadPosRankSum=1.942;VQSLOD=4.8350;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,30:34:72.03:1114,72,0	0/0:7,0:7:21.06:0,21,486	0/0:22,0:22:47.35:0,47,1008	0/0:34,0:34:90.26:0,90,2004	0/0:26,0:26:75.23:0,75,1783	1/1:4,15:19:36.08:607,36,0	1/1:3,29:32:69.02:1094,69,0	0/0:34,0:34:72.23:0,72,1764	0/0:21,0:21:51.17:0,51,1303	1/1:2,27:28:78.24:1311,78,0	1/1:0,18:18:47.86:635,48,0	0/0:34,0:34:93.32:0,93,2353	0/0:30,0:30:84.29:0,84,2148	0/0:20,0:20:57.16:0,57,1353	1/1:4,33:37:84.12:1362,84,0	0/0:30,0:30:87.28:0,87,2115	0/0:22,0:22:60.21:0,60,1529	1/1:4,14:18:36.12:641,36,0	0/0:21,0:21:45.15:0,45,1151	0/0:30,0:30:81.22:0,81,1904	0/0:30,0:30:75.25:0,75,1862	0/0:14,0:14:39.13:0,39,974	0/0:15,0:15:42.14:0,42,1037	0/0:36,0:36:95.96:0,96,2403	0/0:15,0:15:42.14:0,42,1056	0/0:27,0:27:51.60:0,52,1777	0/0:33,0:33:87.27:0,87,2102	0/0:2,0:2:6.02:0,6,136
chr10	37110636	.	T	TA	2147.80	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=-8.352;DP=441;FS=0.498;HRun=6;HaplotypeScore=41.5220;InbreedingCoeff=0.8217;MQ=62.96;MQ0=3;MQRankSum=1.015;QD=27.89;ReadPosRankSum=2.234;VQSLOD=3.8766;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:77.77:0,78,774	0/0:9,0:9:27.06:0,27,275	0/0:10,0:5:12:0,12,110	0/0:5,0:4:8.98:0,9,80	1/1:2,20:22:57.12:697,57,0	0/0:18,0:18:48.11:0,48,490	0/0:6,0:6:18.04:0,18,184	0/0:34,0:34:84.17:0,84,846	1/1:1,10:11:33.11:415,33,0	0/0:19,0:19:54.07:0,54,532	0/0:24,0:24:63.12:0,63,635	0/0:11,0:11:27.05:0,27,270	0/0:15,0:15:42.09:0,42,423	0/0:14,0:14:39.09:0,39,398	0/0:27,0:26:72.16:0,72,734	1/1:0,14:14:42.13:528,42,0	1/1:2,21:23:51.16:642,51,0	0/0:15,0:15:35.36:0,35,365	0/0:25,0:24:57.12:0,57,577	0/0:22,0:22:57.12:0,57,576	0/0:6,0:6:12.02:0,12,122	0/0:3,0:3:9.02:0,9,92	0/0:8,0:8:24.03:0,24,231	0/0:6,0:6:18.04:0,18,184	0/0:23,0:23:69.14:0,69,697	0/0:11,0:11:18.93:0,19,185	0/0:23,0:23:66.11:0,66,654	0/1:7,0:7:30.75:31,0,102
chr10	37112199	.	GGTT	G	1490.24	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.084;DP=769;FS=14.311;HRun=0;HaplotypeScore=107.3226;InbreedingCoeff=0.9825;MQ=90.35;MQ0=0;MQRankSum=-2.923;QD=37.26;ReadPosRankSum=0.910;VQSLOD=4.1287;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,120,2606	0/0:9,0:9:24.08:0,24,513	0/0:28,0:28:68.71:0,69,1323	0/0:35,0:35:88.58:0,89,1576	0/0:24,0:24:60.21:0,60,1309	0/0:25,0:25:75.26:0,75,1626	0/0:19,0:19:54.19:0,54,1171	0/0:41,0:41:99:0,105,2293	0/0:30,0:30:90.27:0,90,1914	0/0:25,0:25:66.23:0,66,1445	0/0:14,0:14:42.14:0,42,925	0/0:31,0:31:90.31:0,90,1929	0/0:27,0:27:75.26:0,75,1598	0/0:20,0:20:60.11:0,60,1234	0/0:35,0:35:96.33:0,96,2088	0/0:35,0:35:96.33:0,96,2069	0/0:39,0:39:99:0,117,2545	0/0:19,0:19:54.19:0,54,1189	0/0:30,0:30:69.23:0,69,1503	0/0:23,0:23:69.24:0,69,1501	0/0:60,0:60:99:0,165,3491	0/0:21,0:21:57.20:0,57,1237	0/0:15,0:15:42.14:0,42,888	0/0:37,0:37:99:0,111,2295	0/0:18,0:18:51.18:0,51,1126	1/1:3,26:29:12:1125,12,0	0/0:26,0:26:69.24:0,69,1516	1/1:0,11:11:30.10:482,30,0
chr10	37113530	.	TACACACACACACACACACACACACACACACACACACAC	T	1490.80	PASS	AB=0.628;AC=5;AF=0.089;AN=56;BaseQRankSum=3.946;DP=488;FS=16.803;HRun=0;HaplotypeScore=359.8246;InbreedingCoeff=0.5707;MQ=59.54;MQ0=13;MQRankSum=-3.988;QD=25.27;ReadPosRankSum=1.137;VQSLOD=0.9573;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:24.08:0,24,2220	0/0:7,0:6:12.04:0,12,860	0/0:29,0:19:12.04:0,12,435	0/0:26,0:16:15.05:0,15,433	0/0:5,0:6:6.02:0,6,651	0/0:15,0:15:24.05:0,24,2089	0/0:16,0:14:21.54:0,22,1092	0/0:26,0:26:28.91:0,29,1213	0/0:15,0:15:15.02:0,15,1486	0/0:19,0:19:36.12:0,36,3309	0/0:11,0:11:11.62:0,12,1224	1/1:7,17:23:6.02:573,6,0	0/0:12,0:12:18.53:0,19,1264	0/0:16,0:16:30.08:0,30,2152	0/0:16,0:16:24.07:0,24,2186	0/0:19,0:19:30.10:0,30,2836	0/0:17,0:16:30.10:0,30,2665	0/0:19,0:18:33.08:0,33,3212	0/0:12,0:12:20.61:0,21,988	0/0:13,0:13:9.03:0,9,700	0/0:36,0:31:40.02:0,40,2833	0/0:27,0:26:39.12:0,39,2285	1/1:8,0:8:12.04:190,12,0	0/1:11,16:24:91.51:844,0,92	0/0:8,0:8:9.03:0,9,676	0/0:19,0:19:30.10:0,30,2176	0/0:12,0:13:18.06:0,18,1106	0/0:7,0:7:5.99:0,6,271
chr10	37114307	.	T	TC	4674.94	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-11.258;DP=507;FS=0.000;HRun=2;HaplotypeScore=79.9532;InbreedingCoeff=0.9555;MQ=70.17;MQ0=1;MQRankSum=-0.301;QD=28.68;ReadPosRankSum=-1.212;VQSLOD=4.0413;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:89.95:0,90,1222	1/1:1,8:9:15.05:210,15,0	0/0:24,0:14:11.84:0,12,142	0/0:10,0:8:3.17:0,3,128	0/0:18,0:18:45.10:0,45,508	0/0:17,0:17:42.12:0,42,507	0/0:20,0:20:60.15:0,60,705	1/1:2,24:25:63.17:829,63,0	0/0:12,0:12:27.08:0,27,332	0/0:22,0:22:60.17:0,60,714	0/0:19,0:19:57.11:0,57,645	0/0:24,0:24:18.89:0,19,427	1/1:2,12:14:24.08:331,24,0	1/1:0,13:13:24.08:335,24,0	0/0:22,0:22:57.15:0,57,670	0/0:23,0:23:60.17:0,60,720	0/0:24,0:24:66.15:0,66,771	0/0:24,0:24:66.15:0,66,785	1/1:2,12:14:37.57:411,38,0	1/1:2,7:8:20.95:246,21,0	1/1:4,27:31:60.16:817,60,0	1/1:1,9:10:24.08:328,24,0	0/0:9,0:9:20.25:0,20,132	0/0:13,0:13:12.18:0,12,308	1/1:0,18:17:48.16:670,48,0	0/0:18,0:18:51.14:0,51,610	1/1:2,17:19:36.12:499,36,0	0/0:6,0:5:12.02:0,12,134
chr10	37114313	.	C	CG	1773.61	PASS	AB=0.955;AC=7;AF=0.125;AN=56;BaseQRankSum=-5.596;DP=456;FS=1.185;HRun=1;HaplotypeScore=76.5051;InbreedingCoeff=0.8106;MQ=69.41;MQ0=1;MQRankSum=-0.586;QD=24.98;ReadPosRankSum=-0.127;VQSLOD=3.4731;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,111,1434	0/0:8,0:8:17.99:0,18,191	0/1:20,0:11:14:14,0,126	0/0:9,0:7:20.55:0,21,235	0/0:15,0:15:45.14:0,45,569	0/0:14,0:14:42.14:0,42,544	0/0:19,0:19:57.19:0,57,739	0/0:22,0:21:52.90:0,53,536	0/0:11,0:11:30.10:0,30,386	0/0:21,0:21:63.19:0,63,800	0/0:15,0:15:45.15:0,45,584	1/1:2,23:25:72.24:1057,72,0	0/0:9,0:9:18.52:0,19,113	0/0:11,0:11:23.87:0,24,185	0/0:17,0:17:48.16:0,48,622	0/0:22,0:22:60.20:0,60,778	0/0:21,0:21:63.04:0,63,787	0/0:24,0:24:69.19:0,69,876	0/0:12,0:12:13.40:0,13,224	0/0:8,0:8:20.76:0,21,179	0/0:25,0:25:55.98:0,56,512	0/0:12,0:12:11.64:0,12,173	1/1:0,11:11:24.08:359,24,0	1/1:3,11:14:33.11:491,33,0	0/0:17,0:16:47.22:0,47,439	0/0:16,0:16:48.11:0,48,601	0/0:15,0:15:32.14:0,32,263	0/0:4,0:3:12.04:0,12,156
chr10	37114507	.	T	TGG	1862.45	PASS	AB=0.949;AC=12;AF=0.214;AN=56;BaseQRankSum=-0.914;DP=554;FS=6.798;HRun=0;HaplotypeScore=107.2969;InbreedingCoeff=0.7491;MQ=71.34;MQ0=9;MQRankSum=-6.694;QD=14.55;ReadPosRankSum=0.354;VQSLOD=3.3132;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:23,1:24:9.27:39,0,9	0/0:6,0:6:18.02:0,18,203	0/0:60,0:21:29.41:0,29,401	0/0:41,0:14:21.93:0,22,248	0/0:35,0:35:99:0,102,1605	1/1:5,3:9:18.04:246,18,0	1/1:11,9:21:11.70:479,12,0	0/0:18,0:17:44.95:0,45,497	0/0:10,0:10:30.10:0,30,476	0/1:14,0:15:14.12:120,0,14	1/1:12,1:14:4:204,4,0	0/0:18,0:18:54.04:0,54,582	0/0:11,0:11:29.76:0,30,380	0/0:16,0:16:48.04:0,48,606	1/1:4,13:18:20.97:423,21,0	0/0:23,0:23:69.22:0,69,1094	0/0:33,0:33:99:0,99,1447	1/1:7,19:26:16.35:524,16,0	0/0:12,0:11:24:0,24,270	0/0:22,0:22:63.36:0,63,715	0/0:14,0:14:30.42:0,30,401	0/0:19,0:19:53.87:0,54,617	0/0:17,0:17:32.39:0,32,323	0/0:20,0:20:42.01:0,42,470	0/0:15,0:15:42.95:0,43,504	0/0:12,0:12:27.09:0,27,420	0/0:16,0:16:48.02:0,48,609	0/0:8,0:8:12.04:0,12,182
chr10	37114508	.	T	TG	1946.01	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=0.822;DP=550;FS=0.938;HRun=8;HaplotypeScore=99.3466;InbreedingCoeff=0.8240;MQ=71.23;MQ0=9;MQRankSum=-2.001;QD=10.35;ReadPosRankSum=0.233;VQSLOD=2.3219;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,0:19:8.96:69,9,0	0/0:6,0:6:3.12:0,3,32	0/0:58,0:22:2.50:0,2,159	0/0:40,0:13:18:0,18,117	0/0:35,0:35:82.45:0,82,716	1/1:6,0:7:17.10:91,17,0	1/1:19,0:21:36.82:196,37,0	0/0:16,0:15:18.23:0,18,91	0/0:10,0:10:29.69:0,30,242	1/1:13,0:15:23.31:125,23,0	1/1:9,0:11:17.43:107,17,0	1/1:5,14:20:45.11:504,45,0	0/0:11,0:11:18.59:0,19,82	0/0:17,0:17:21.43:0,21,133	1/1:18,0:18:34.50:190,35,0	0/0:22,0:22:56.98:0,57,512	0/0:33,0:33:89.67:0,90,772	1/1:25,0:26:41.32:232,41,0	0/1:13,0:12:9.28:9,0,17	0/0:21,0:21:18.15:0,18,109	0/0:14,0:14:20.42:0,20,87	0/0:20,0:20:24.75:0,25,110	1/1:2,15:17:24.07:272,24,0	1/1:4,16:20:33.05:362,33,0	0/0:16,0:16:14.07:0,14,95	0/0:13,0:13:4.79:0,5,12	0/0:17,0:17:22.03:0,22,98	0/0:10,0:10:4.01:0,4,12
chr10	37114516	.	GT	G	2921.79	PASS	AB=0.910;AC=28;AF=0.500;AN=56;BaseQRankSum=4.345;DP=519;FS=7.939;HRun=1;HaplotypeScore=77.8978;InbreedingCoeff=0.5171;MQ=69.01;MQ0=9;MQRankSum=-3.155;QD=10.36;ReadPosRankSum=-4.331;VQSLOD=-0.4476;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:8.21:0,8,135	1/1:4,1:5:5.87:100,6,0	0/1:52,5:18:15.16:15,0,214	0/0:39,3:14:17.39:0,17,155	0/0:30,0:30:86.73:0,87,1076	0/0:10,0:10:0.46:0,0,80	0/1:16,0:16:33.94:34,0,90	1/1:10,3:12:25.37:187,25,0	0/0:10,0:10:30.06:0,30,387	0/1:11,0:11:7.85:8,0,49	0/1:7,0:7:17.40:17,0,25	0/0:18,0:18:46.12:0,46,308	1/1:8,2:10:26.26:217,26,0	1/1:17,0:17:46.16:338,46,0	0/0:17,0:17:11.27:0,11,128	0/0:22,0:22:62.75:0,63,788	0/0:33,0:33:75.71:0,76,1153	0/1:33,0:32:49.47:49,0,152	1/1:13,1:12:23.15:199,23,0	1/1:12,1:13:22.94:310,23,0	1/1:11,2:13:30.77:280,31,0	1/1:10,2:12:32.70:276,33,0	0/0:16,0:16:12.72:0,13,114	0/0:17,0:17:30.28:0,30,203	1/1:14,1:15:38.44:285,38,0	0/1:3,10:13:10.92:263,0,11	1/1:11,2:13:38.81:389,39,0	1/1:1,15:16:12.04:157,12,0
chr10	37115544	.	TG	T	1608.41	PASS	AC=20;AF=0.417;AN=48;BaseQRankSum=-2.365;DP=253;FS=2.563;HRun=10;HaplotypeScore=35.5339;InbreedingCoeff=0.8357;MQ=58.73;MQ0=16;MQRankSum=1.595;QD=15.62;ReadPosRankSum=2.967;VQSLOD=3.4208;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:9:8.78:0,9,41	1/1:1,3:4:9:77,9,0	0/0:27,0:8:20.99:0,21,200	0/0:36,0:8:8.38:0,8,63	0/0:13,0:13:30.07:0,30,323	./.	0/0:3,0:8:11.52:0,12,69	1/1:4,8:12:20.98:182,21,0	0/0:9,0:9:18.03:0,18,190	./.	0/0:4,0:3:2.67:0,3,19	0/0:0,0:2:5.78:0,6,32	1/1:1,7:8:21:182,21,0	1/1:1,15:16:41.99:365,42,0	0/0:1,0:2:0.47:0,0,1	0/0:8,0:8:21.05:0,21,227	0/0:5,0:5:12.02:0,12,124	./.	1/1:2,3:5:6:52,6,0	1/1:2,9:11:26.99:234,27,0	1/1:4,13:18:29.99:260,30,0	1/1:3,10:12:17.80:156,18,0	0/0:3,0:7:15.34:0,15,86	0/0:3,0:6:11.36:0,11,57	1/1:1,3:4:8.99:78,9,0	0/0:6,0:6:9.02:0,9,91	1/1:2,10:12:23.98:208,24,0	./.
chr10	37115582	.	G	GA	489.11	PASS	AB=0.538;AC=9;AF=0.161;AN=56;BaseQRankSum=-3.864;DP=293;FS=0.000;HRun=9;HaplotypeScore=40.9548;InbreedingCoeff=0.7588;MQ=69.56;MQ0=1;MQRankSum=-0.116;QD=14.39;ReadPosRankSum=-0.973;VQSLOD=2.7223;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:20.95:0,21,176	0/0:2,0:2:6:0,6,52	0/0:32,0:11:0.68:0,1,40	0/0:19,1:12:10.65:0,11,72	0/0:15,0:15:38.95:0,39,328	0/0:8,0:8:23.97:0,24,202	0/0:4,0:4:12:0,12,104	0/0:13,0:13:38.97:0,39,332	0/0:10,0:10:26.99:0,27,234	0/0:9,0:9:23.96:0,24,202	0/0:5,0:5:9:0,9,78	1/1:0,9:9:12.03:132,12,0	0/0:12,0:12:32.99:0,33,285	0/0:11,0:11:29.96:0,30,253	0/0:12,0:12:32.98:0,33,283	0/0:13,0:13:32.95:0,33,277	0/0:8,0:8:17.96:0,18,152	0/0:3,0:3:5.99:0,6,52	0/0:6,0:6:14.97:0,15,123	0/0:12,1:13:33.46:0,33,287	0/0:11,0:11:23.99:0,24,208	0/0:17,0:17:41.65:0,42,346	1/1:4,3:7:18.02:182,18,0	1/1:1,5:6:12.03:132,12,0	0/0:11,0:11:32.98:0,33,284	1/1:1,4:5:9.02:99,9,0	0/0:13,0:13:26.98:0,27,231	0/1:1,6:7:1.79:95,0,2
chr10	37118546	.	T	TC	1506.06	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-7.899;DP=693;FS=12.621;HRun=3;HaplotypeScore=72.7162;InbreedingCoeff=0.8599;MQ=81.86;MQ0=0;MQRankSum=-0.754;QD=30.12;ReadPosRankSum=1.831;VQSLOD=2.5490;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,132,1568	0/0:9,0:9:21.06:0,21,250	0/0:25,0:26:68.36:0,68,751	0/0:16,0:16:44.72:0,45,507	0/0:18,0:18:48.13:0,48,559	0/0:15,0:15:45.12:0,45,528	0/0:29,0:29:75.22:0,75,889	0/0:30,0:30:75.21:0,75,878	0/0:24,0:24:63.17:0,63,742	0/0:19,0:19:51.15:0,51,602	0/0:13,0:13:39.09:0,39,444	0/0:49,0:49:99:0,144,1705	0/0:25,0:25:75.22:0,75,888	0/0:30,0:30:87.25:0,87,1031	0/0:31,0:31:93.27:0,93,1104	0/0:32,0:32:96.29:0,96,1152	0/0:42,0:42:99:0,123,1457	0/0:21,0:21:63.17:0,63,741	0/0:16,0:16:39.10:0,39,449	0/0:12,0:12:27.08:0,27,324	0/0:37,0:37:96.28:0,96,1140	0/0:22,0:22:60.05:0,60,698	0/0:11,0:11:33.09:0,33,385	0/0:29,0:29:84.23:0,84,983	0/0:11,0:11:33.08:0,33,383	1/1:6,31:37:0.78:1109,1,0	0/0:29,0:29:81.24:0,81,960	1/1:1,12:13:36.12:504,36,0
chr10	37119383	.	TG	T	1325.12	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=0.195;DP=590;FS=2.134;HRun=1;HaplotypeScore=98.0236;InbreedingCoeff=0.8209;MQ=64.72;MQ0=0;MQRankSum=-0.777;QD=8.39;ReadPosRankSum=-4.648;VQSLOD=-0.7568;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:30,2:32:9.55:225,10,0	0/0:9,0:9:18.38:0,18,162	0/0:14,0:11:17.58:0,18,161	0/1:6,0:4:6.12:6,0,82	0/0:29,0:29:83.85:0,84,877	1/1:14,1:15:0.65:101,1,0	1/1:15,3:18:4.01:176,4,0	0/0:36,0:35:87.66:0,88,744	0/0:19,1:20:49.12:0,49,660	1/1:24,1:25:56.27:457,56,0	1/1:18,0:18:13.30:118,13,0	0/0:21,0:21:62.64:0,63,493	0/0:17,0:17:34.88:0,35,253	0/0:14,0:14:19.39:0,19,172	1/1:22,0:22:23.14:218,23,0	0/0:22,1:23:65.92:0,66,708	0/0:33,0:33:76.02:0,76,961	1/1:20,2:22:8.98:202,9,0	0/0:19,0:18:47.14:0,47,481	0/0:27,0:27:46.92:0,47,586	0/0:11,0:11:20.89:0,21,171	0/0:21,0:21:25.22:0,25,414	0/0:16,0:16:38.69:0,39,280	0/0:26,0:26:56.62:0,57,430	0/0:18,0:18:32.83:0,33,280	0/0:30,0:30:54.04:0,54,619	0/0:29,0:29:59.33:0,59,440	0/0:19,0:19:50.73:0,51,389
chr10	37119384	.	G	GTTT	5713.09	PASS	AB=0.858;AC=32;AF=0.571;AN=56;BaseQRankSum=-5.829;DP=619;FS=9.643;HRun=12;HaplotypeScore=113.7623;InbreedingCoeff=0.6561;MQ=62.54;MQ0=0;MQRankSum=0.268;QD=14.21;ReadPosRankSum=-3.524;VQSLOD=1.7849;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:48.02:0,48,450	1/1:3,5:10:8.93:121,9,0	0/0:11,0:9:1.58:0,2,32	0/0:6,0:4:4.12:0,4,39	0/0:27,0:30:24.86:0,25,477	0/0:15,0:15:29.07:0,29,244	0/1:18,0:18:1.60:2,0,242	1/1:19,14:35:57.38:800,57,0	0/0:20,0:20:44.91:0,45,485	0/1:25,0:25:36.98:37,0,87	0/1:15,0:19:41.82:42,0,159	0/1:8,0:23:10.01:56,0,10	1/1:9,9:19:18:263,18,0	1/1:5,10:16:15.01:240,15,0	0/0:22,0:22:44.65:0,45,362	0/0:23,0:23:35.83:0,36,403	0/0:30,0:35:77.72:0,78,831	0/0:22,0:22:26.80:0,27,325	1/1:13,5:18:19.61:276,20,0	1/1:7,18:27:57.06:841,57,0	1/1:6,0:12:8.99:101,9,0	1/1:5,15:22:44.87:583,45,0	1/1:5,0:18:12.68:46,13,0	1/1:4,0:28:6.36:62,6,0	1/1:7,12:22:23.42:257,23,0	1/1:13,0:34:71.10:878,71,0	1/1:7,21:33:42.10:682,42,0	1/1:9,3:21:30.06:427,30,0
chr10	37120147	.	ATG	A	6290.48	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=14.039;DP=657;FS=1.964;HRun=0;HaplotypeScore=76.8832;InbreedingCoeff=0.9594;MQ=85.89;MQ0=0;MQRankSum=-1.749;QD=38.36;ReadPosRankSum=4.108;VQSLOD=6.8767;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,29:30:84.28:1204,84,0	0/0:12,0:12:36.12:0,36,657	0/0:23,0:23:57.19:0,57,970	0/0:20,0:20:28.76:0,29,691	0/0:24,0:24:69.24:0,69,1237	1/1:0,24:24:72.24:1032,72,0	1/1:1,18:19:45.15:645,45,0	0/0:30,0:30:87.29:0,87,1551	0/0:22,0:22:63.20:0,63,1121	1/1:1,24:25:69.22:960,69,0	1/1:0,27:27:75.25:1075,75,0	0/0:23,0:23:69.22:0,69,1212	0/0:20,0:20:57.18:0,57,1010	0/0:19,0:19:54.19:0,54,986	1/1:0,30:30:72.24:1032,72,0	0/0:41,0:41:99:0,117,2120	0/0:23,0:23:69.24:0,69,1260	1/1:0,9:9:24.08:344,24,0	0/0:23,0:23:69.24:0,69,1238	0/0:30,0:30:90.31:0,90,1637	0/0:26,0:26:69.21:0,69,1204	0/0:19,0:19:57.20:0,57,1041	0/0:29,0:29:84.27:0,84,1490	0/0:23,0:23:69.24:0,69,1243	0/0:17,0:17:51.17:0,51,931	0/0:27,2:29:1.30:0,1,1382	0/0:31,0:31:90.31:0,90,1623	0/0:9,0:9:24.08:0,24,438
chr10	37121414	.	GAC	G	463.15	PASS	AB=0.949;AC=8;AF=0.143;AN=56;BaseQRankSum=11.537;DP=638;FS=5.903;HRun=0;HaplotypeScore=113.2796;InbreedingCoeff=0.1187;MQ=67.30;MQ0=0;MQRankSum=-2.484;QD=2.72;ReadPosRankSum=5.322;VQSLOD=1.0958;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:42.24:0,42,281	0/0:13,0:13:38.11:0,38,234	0/1:16,1:17:16.94:17,0,212	0/1:9,1:10:47.78:48,0,98	0/0:35,0:35:98.91:0,99,1389	0/0:30,0:30:70.28:0,70,534	0/0:14,0:14:41.40:0,41,320	0/0:23,0:23:41.98:0,42,330	0/0:20,0:20:33.71:0,34,582	0/0:26,0:26:70.30:0,70,439	0/0:28,0:28:38.26:0,38,330	0/1:39,2:41:63.37:241,0,63	0/0:21,0:22:26.04:0,26,256	0/0:20,1:21:16.61:0,17,326	0/0:29,0:29:68.99:0,69,430	0/0:31,0:31:78.16:0,78,1118	0/0:14,0:14:36.09:0,36,532	0/0:7,0:7:17.66:0,18,133	0/0:10,0:10:19.28:0,19,179	0/0:34,0:34:92.89:0,93,641	0/0:13,0:13:35.22:0,35,219	0/0:15,0:15:44.17:0,44,334	0/1:32,0:32:92.38:92,0,126	0/1:24,2:26:44.11:133,0,44	0/0:30,0:30:74.48:0,74,474	0/1:26,0:26:23.42:23,0,122	0/0:30,0:31:70.72:0,71,458	1/1:17,0:17:16.93:49,17,0
chr10	37121416	.	CA	C	5647.53	PASS	AB=0.740;AC=42;AF=0.750;AN=56;BaseQRankSum=5.715;DP=649;FS=6.144;HRun=13;HaplotypeScore=86.4437;InbreedingCoeff=0.4157;MQ=67.58;MQ0=0;MQRankSum=-1.426;QD=10.12;ReadPosRankSum=3.595;VQSLOD=4.4535;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,16:21:44.93:316,45,0	1/1:3,11:14:29.80:219,30,0	0/1:18,3:19:25.66:26,0,97	0/0:11,0:11:0.26:0,0,48	0/0:29,4:34:30.15:0,30,663	1/1:9,21:31:3.29:341,3,0	0/1:5,10:15:2.37:148,0,2	1/1:9,14:24:46.53:331,47,0	0/1:19,0:20:1:1,0,263	1/1:3,22:25:59.61:438,60,0	1/1:4,20:28:64.78:439,65,0	1/1:8,0:41:67.19:195,67,0	1/1:13,11:25:7.21:214,7,0	0/1:11,12:23:3.37:222,0,3	1/1:10,16:28:54.72:383,55,0	0/0:30,0:31:68.05:0,68,619	0/0:15,0:15:39.02:0,39,359	1/1:6,2:8:2.30:38,2,0	0/1:5,3:9:12.24:76,0,12	1/1:7,26:33:48.31:517,48,0	1/1:2,13:15:29.81:217,30,0	0/1:6,10:16:19.63:202,0,20	1/1:10,0:33:40.38:117,40,0	1/1:8,0:26:41.66:132,42,0	1/1:6,23:30:42.88:441,43,0	1/1:7,1:27:38.45:124,38,0	1/1:12,20:32:62.58:457,63,0	1/1:0,0:13:18.33:53,18,0
chr10	37124083	.	A	AC	2618.16	PASS	AB=0.875;AC=23;AF=0.411;AN=56;BaseQRankSum=-3.011;DP=538;FS=38.466;HRun=1;HaplotypeScore=79.4832;InbreedingCoeff=0.7400;MQ=54.47;MQ0=26;MQRankSum=-4.504;QD=10.39;ReadPosRankSum=0.374;VQSLOD=-0.4131;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:54.48:0,54,402	1/1:9,1:9:21.96:131,22,0	0/0:17,0:7:17.60:0,18,125	0/1:17,0:9:1.24:1,0,43	0/0:21,0:21:33.36:0,33,251	0/0:16,0:15:19.77:0,20,184	0/0:13,0:11:22.05:0,22,173	1/1:31,2:33:62.95:534,63,0	0/0:8,0:8:16.70:0,17,128	0/0:17,0:16:17.29:0,17,273	0/0:30,0:29:61.56:0,62,517	0/0:23,0:22:56.03:0,56,464	1/1:14,0:14:2.29:131,2,0	0/1:18,0:18:19.58:100,0,20	0/0:16,0:16:40.75:0,41,366	0/0:24,0:24:55.05:0,55,425	0/0:26,1:24:21.91:0,22,498	0/0:18,0:18:18.65:0,19,294	1/1:20,1:18:15.28:219,15,0	1/1:22,2:23:17.71:275,18,0	1/1:6,6:9:2.13:128,2,0	1/1:16,0:16:30.25:204,30,0	0/0:13,0:13:29.96:0,30,265	0/0:18,0:18:44.58:0,45,355	1/1:22,2:24:23.54:364,24,0	1/1:24,1:24:60.81:438,61,0	0/1:8,12:19:41.64:111,0,42	1/1:15,2:13:26.13:187,26,0
chr10	37124324	.	A	AT	6103.57	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=-13.405;DP=544;FS=0.347;HRun=5;HaplotypeScore=51.4528;InbreedingCoeff=0.9289;MQ=75.72;MQ0=0;MQRankSum=1.374;QD=27.87;ReadPosRankSum=2.181;VQSLOD=4.9313;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:84.08:0,84,845	1/1:0,9:9:21.01:250,21,0	0/1:18,0:14:7.50:8,0,61	0/0:12,0:10:12.38:0,12,83	0/0:20,0:20:54.11:0,54,558	0/0:24,0:24:66.06:0,66,666	0/0:14,0:14:39.07:0,39,403	1/1:4,23:27:69.19:855,69,0	0/0:15,0:15:21.18:0,21,407	0/0:25,0:25:72.98:0,73,720	0/0:19,0:19:51.04:0,51,525	0/0:24,0:24:72.11:0,72,731	1/1:2,20:22:57.19:732,57,0	1/1:1,15:16:36.12:462,36,0	0/0:25,0:25:72.12:0,72,734	0/0:28,0:28:81.16:0,81,844	0/0:18,0:18:45.11:0,45,481	0/0:12,0:12:36.07:0,36,375	1/1:4,16:20:48.09:560,48,0	1/1:2,18:20:51.10:634,51,0	1/1:1,16:17:39.13:501,39,0	1/1:0,7:7:21.07:269,21,0	0/0:14,0:14:39.07:0,39,408	0/0:9,0:9:27.05:0,27,276	1/1:1,17:19:42.12:524,42,0	0/0:28,0:28:84.11:0,84,872	1/1:1,43:42:99:1310,102,0	0/0:9,0:9:27.07:0,27,288
chr10	37125902	.	CA	C	6567.28	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=13.774;DP=725;FS=1.326;HRun=6;HaplotypeScore=73.7105;InbreedingCoeff=0.9954;MQ=85.20;MQ0=0;MQRankSum=-5.466;QD=27.14;ReadPosRankSum=-0.407;VQSLOD=5.0958;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,144,1862	1/1:0,13:13:36.09:386,36,0	0/0:26,0:26:68.93:0,69,839	0/0:26,0:26:62.35:0,62,771	0/0:20,0:20:60.19:0,60,788	0/0:19,0:19:57.18:0,57,737	0/0:27,0:27:69.21:0,69,892	1/1:3,26:29:72.15:763,72,0	0/0:33,0:33:99:0,99,1272	0/0:22,0:22:66.21:0,66,857	0/0:17,0:17:51.15:0,51,656	0/0:38,0:38:99:0,108,1420	1/1:2,24:26:60.15:645,60,0	1/1:4,36:40:99:1160,108,0	0/0:35,0:35:99:0,99,1302	0/0:25,0:25:75.23:0,75,972	0/0:34,0:34:96.31:0,96,1258	0/0:26,0:26:75.24:0,75,986	1/1:4,14:18:45.08:467,45,0	1/1:3,22:25:57.10:598,57,0	1/1:1,26:27:72.18:774,72,0	1/1:1,15:16:36.09:387,36,0	0/0:26,0:26:75.22:0,75,957	0/0:22,0:22:66.20:0,66,849	1/1:1,21:22:60.15:645,60,0	0/0:35,0:35:93.29:0,93,1199	1/1:0,26:26:69.04:741,69,0	0/0:4,0:4:12.04:0,12,158
chr10	37127897	.	TATAAAAAAAA	T	1691.18	PASS	AC=4;AF=0.074;AN=54;BaseQRankSum=5.970;DP=330;FS=11.938;HRun=0;HaplotypeScore=101.3101;InbreedingCoeff=0.6687;MQ=65.24;MQ0=0;MQRankSum=-6.498;QD=73.53;ReadPosRankSum=2.209;VQSLOD=2.5094;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:16:39.12:0,39,1588	0/0:4,0:4:12.04:0,12,443	0/0:22,0:9:24.04:0,24,500	0/0:15,0:8:6.91:0,7,223	0/0:10,0:10:27.09:0,27,1310	0/0:12,0:12:33.11:0,33,1651	0/0:4,0:4:12.04:0,12,604	0/0:34,0:34:81.26:0,81,2648	0/0:5,0:5:15.05:0,15,649	0/0:16,0:16:45.14:0,45,1880	0/0:1,0:1:3.01:0,3,151	0/0:6,0:6:15.05:0,15,579	0/0:5,0:5:15.05:0,15,538	0/0:6,0:6:12.04:0,12,443	0/0:12,0:12:30.10:0,30,1476	0/0:7,0:7:21.07:0,21,1005	0/0:46,0:46:99:0,108,5206	0/0:18,0:18:42.14:0,42,1703	0/0:25,0:25:57.20:0,57,1919	0/0:4,0:4:0.47:0,0,1	0/0:4,0:4:3.01:0,3,111	0/0:1,0:1:3.01:0,3,111	./.	0/0:4,0:4:9.03:0,9,454	0/0:17,0:17:30.10:0,30,1073	1/1:0,16:16:44.89:1180,45,0	0/0:10,0:10:27.09:0,27,981	1/1:0,7:7:21.07:629,21,0
chr10	37127899	.	TA	T	2144.41	PASS	AC=24;AF=0.444;AN=54;BaseQRankSum=8.827;DP=327;FS=6.330;HRun=9;HaplotypeScore=44.4972;InbreedingCoeff=0.8631;MQ=68.13;MQ0=0;MQRankSum=-3.120;QD=16.50;ReadPosRankSum=-1.438;VQSLOD=2.9459;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:18:45.10:0,45,496	1/1:0,4:4:12.01:110,12,0	0/0:23,0:10:11.34:0,11,184	0/0:16,0:9:5.95:0,6,53	0/0:10,0:10:27.08:0,27,311	0/0:12,0:12:33.10:0,33,381	0/0:4,0:4:12.04:0,12,138	1/1:4,27:31:81.04:741,81,0	0/0:5,0:5:15.04:0,15,173	0/0:15,0:15:45.13:0,45,519	0/0:2,0:2:6.02:0,6,68	0/0:5,0:5:12.90:0,13,129	1/1:0,5:5:15.01:137,15,0	1/1:1,5:6:12.01:110,12,0	0/0:11,0:11:30.09:0,30,346	0/0:7,0:7:21.06:0,21,242	0/0:43,0:44:99:0,111,1260	0/0:18,0:18:41.15:0,41,453	1/1:5,20:25:57.02:521,57,0	1/1:4,1:5:6:55,6,0	1/1:1,2:3:3:27,3,0	1/1:0,1:1:3:27,3,0	./.	0/0:4,0:4:9.03:0,9,104	1/1:1,16:17:30.02:275,30,0	1/1:16,0:16:15.07:59,15,0	1/1:0,10:10:27.01:247,27,0	1/1:7,0:7:14.04:42,14,0
chr10	37129873	.	A	AAGAGAG	12878.38	PASS	AB=0.676;AC=23;AF=0.411;AN=56;BaseQRankSum=-5.879;DP=699;FS=1.611;HRun=0;HaplotypeScore=141.3920;InbreedingCoeff=0.9182;MQ=66.66;MQ0=1;MQRankSum=-9.887;QD=43.95;ReadPosRankSum=-1.863;VQSLOD=4.5436;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:69.22:0,69,1454	1/1:1,5:6:12.04:344,12,0	0/0:39,0:27:47.62:0,48,773	0/0:38,0:28:28.89:0,29,757	0/0:25,0:25:57.19:0,57,1181	0/0:21,0:20:60.13:0,60,1173	0/0:21,0:21:42.14:0,42,902	1/1:18,24:43:81.19:1580,81,0	0/0:20,0:20:45.15:0,45,940	0/0:15,0:15:33.06:0,33,605	0/0:23,0:23:66.21:0,66,1376	0/0:28,0:28:75.24:0,75,1490	1/1:5,14:19:39.13:1331,39,0	1/1:6,21:30:51.18:1741,51,0	0/0:27,0:27:69.21:0,69,1388	0/0:34,0:34:87.28:0,87,1841	0/0:23,0:23:63.22:0,63,1385	0/0:26,0:26:63.20:0,63,1291	1/1:7,14:22:45.15:1204,45,0	1/1:7,24:31:54.17:1380,54,0	1/1:15,14:33:21.34:346,21,0	1/1:2,13:16:18.06:483,18,0	0/0:14,0:14:33.10:0,33,681	0/0:25,0:25:66.20:0,66,1327	1/1:3,10:13:18.06:550,18,0	0/1:12,10:23:33.84:870,0,34	1/1:14,23:45:69.24:2333,69,0	1/1:1,9:11:21.07:718,21,0
chr10	37131619	.	C	CT	1038.45	PASS	AB=0.983;AC=18;AF=0.321;AN=56;BaseQRankSum=3.099;DP=519;FS=0.539;HRun=12;HaplotypeScore=76.0075;InbreedingCoeff=0.5891;MQ=58.52;MQ0=24;MQRankSum=-0.666;QD=3.93;ReadPosRankSum=-1.785;VQSLOD=0.5373;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:25,4:28:35.53:316,36,0	0/0:9,0:9:6.80:0,7,35	0/1:51,0:10:0.18:6,0,0	0/1:46,0:14:17.72:25,0,18	0/0:18,0:18:33.47:0,33,223	1/1:13,4:17:2.03:159,2,0	1/1:2,4:6:8.85:72,9,0	0/1:35,0:32:3.10:3,0,178	0/0:8,0:8:15.67:0,16,97	1/1:6,11:17:34.79:262,35,0	1/1:18,2:20:2.74:109,3,0	0/0:21,1:22:21.02:0,21,299	0/0:8,0:8:9.53:0,10,69	0/0:6,0:6:8.16:0,8,40	1/1:6,0:6:11.61:73,12,0	0/0:20,0:20:25.79:0,26,173	0/0:30,0:30:62.15:0,62,408	1/1:12,2:13:18.61:181,19,0	0/1:18,1:15:9.28:9,0,95	0/0:15,0:15:19.04:0,19,149	0/0:14,0:13:16.08:0,16,111	0/0:6,0:6:8.45:0,8,53	0/0:11,0:11:26.81:0,27,197	0/0:17,0:17:38.30:0,38,263	0/0:22,0:21:31.55:0,32,246	0/0:18,0:19:6.38:0,6,36	0/0:26,0:24:41.59:0,42,298	0/0:3,0:3:2.27:0,2,8
chr10	37131632	.	C	CT	1339.23	PASS	AB=0.816;AC=17;AF=0.304;AN=56;BaseQRankSum=3.378;DP=516;FS=1.199;HRun=13;HaplotypeScore=65.3340;InbreedingCoeff=0.6728;MQ=55.75;MQ0=27;MQRankSum=-1.667;QD=6.53;ReadPosRankSum=-1.645;VQSLOD=2.0342;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:21,6:25:19.59:306,20,0	0/0:6,0:6:14.62:0,15,94	0/1:59,0:8:9.98:10,0,22	0/0:56,0:16:1.65:0,2,37	0/0:22,0:22:38.91:0,39,242	1/1:5,12:18:14.97:130,15,0	1/1:5,2:7:12.46:104,12,0	0/0:27,0:26:25.34:0,25,237	0/0:8,0:8:17.15:0,17,118	0/1:15,3:18:1.90:176,0,2	0/1:7,16:23:7.83:207,0,8	0/0:19,0:19:41.50:0,42,281	0/0:6,0:6:8.72:0,9,61	0/0:5,0:5:8.81:0,9,56	1/1:5,1:6:5.84:42,6,0	0/0:13,0:14:9.60:0,10,36	0/0:30,0:31:52.86:0,53,331	1/1:14,2:14:24.41:204,24,0	0/0:17,0:15:24.57:0,25,136	0/0:14,0:14:32:0,32,208	0/0:14,0:13:25.78:0,26,169	0/0:3,0:3:2.96:0,3,20	0/0:10,0:10:23.75:0,24,164	0/0:14,0:14:31.69:0,32,209	0/0:18,0:17:23.36:0,23,171	1/1:21,1:21:11.38:158,11,0	0/0:18,1:17:7.63:0,8,188	1/1:7,1:8:23.46:191,23,0
chr10	37131823	.	T	TA	5689.23	PASS	AB=0.800;AC=45;AF=0.804;AN=56;BaseQRankSum=-6.543;DP=370;FS=9.719;HRun=11;HaplotypeScore=40.5417;InbreedingCoeff=0.7871;MQ=58.47;MQ0=10;MQRankSum=0.114;QD=19.82;ReadPosRankSum=-0.803;VQSLOD=5.0384;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,18:22:45.09:457,45,0	1/1:1,3:3:9.02:91,9,0	0/1:3,1:3:18.18:18,0,37	0/0:11,0:6:11.49:0,11,77	0/0:19,0:19:41.67:0,42,323	1/1:4,13:17:33.07:335,33,0	1/1:3,6:9:18.04:183,18,0	1/1:14,20:30:59.84:584,60,0	0/0:12,0:12:29.86:0,30,230	1/1:6,7:12:21.04:213,21,0	1/1:4,9:13:24.05:244,24,0	1/1:2,12:14:12.87:312,13,0	1/1:2,7:9:20.93:213,21,0	1/1:1,9:10:21.04:213,21,0	1/1:4,10:13:3.82:220,4,0	0/0:15,0:15:38.83:0,39,300	0/0:23,0:22:45.90:0,46,334	1/1:3,11:14:33.07:335,33,0	1/1:1,11:10:30.06:305,30,0	1/1:2,12:14:33.03:324,33,0	1/1:2,10:12:27.05:274,27,0	1/1:0,1:1:3.01:30,3,0	1/1:2,8:9:20.91:213,21,0	1/1:0,4:4:12.02:122,12,0	1/1:4,7:12:17.93:169,18,0	1/1:5,2:10:23.31:159,23,0	1/1:3,20:22:59.79:590,60,0	1/1:1,0:8:17.04:86,17,0
chr10	37132235	.	CT	C	1075.98	PASS	AB=0.944;AC=16;AF=0.286;AN=56;BaseQRankSum=-1.241;DP=490;FS=14.656;HRun=5;HaplotypeScore=66.5305;InbreedingCoeff=0.7015;MQ=57.42;MQ0=25;MQRankSum=-0.356;QD=6.56;ReadPosRankSum=1.698;VQSLOD=-0.1771;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:24,1:23:15.57:131,16,0	0/0:18,0:17:41.52:0,42,388	0/0:27,0:12:0.55:0,1,160	0/0:14,0:9:8.17:0,8,67	0/0:21,0:19:35.84:0,36,337	1/1:18,2:17:14.40:170,14,0	1/1:16,0:15:10.61:125,11,0	0/0:26,0:24:56.13:0,56,500	0/0:19,0:19:38.99:0,39,430	1/1:20,1:18:29.55:201,30,0	1/1:19,2:19:21.41:171,21,0	0/0:15,0:14:17.30:0,17,108	0/0:18,0:17:23.99:0,24,224	0/0:12,0:11:11.99:0,12,117	0/1:14,1:14:9.31:83,0,9	0/0:15,0:14:23.67:0,24,236	0/0:18,0:17:39.05:0,39,434	0/1:18,1:18:8.48:61,0,8	0/0:18,0:19:51.06:0,51,540	0/0:18,0:16:26.59:0,27,250	0/0:6,0:6:9.01:0,9,90	0/0:6,0:6:8.95:0,9,67	0/0:11,0:11:17.50:0,18,150	0/0:12,0:11:8.96:0,9,75	0/0:13,0:13:14.68:0,15,127	1/1:8,7:14:30.88:290,31,0	0/0:38,0:37:64.80:0,65,535	1/1:2,10:12:0.09:29,0,0
chr10	37133375	.	T	TA	364.67	PASS	AB=0.857;AC=5;AF=0.089;AN=56;BaseQRankSum=-3.649;DP=484;FS=6.760;HRun=12;HaplotypeScore=49.3375;InbreedingCoeff=0.7186;MQ=60.35;MQ0=2;MQRankSum=-0.322;QD=11.05;ReadPosRankSum=-0.269;VQSLOD=2.4621;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:61.40:0,61,459	0/0:8,0:8:17.83:0,18,128	0/1:5,1:4:1.62:36,0,2	0/0:7,0:3:2.94:0,3,21	0/0:21,0:21:47.64:0,48,341	0/0:18,0:19:31.75:0,32,222	0/0:12,1:13:29.78:0,30,214	0/0:29,0:29:46.73:0,47,375	0/0:8,0:8:17.89:0,18,131	0/0:25,0:25:41.59:0,42,298	0/0:18,1:19:12.55:0,13,254	0/0:18,1:20:15.54:0,16,277	0/0:16,0:16:38.71:0,39,280	0/0:17,0:17:41.48:0,41,294	0/0:18,0:18:41.24:0,41,299	0/0:19,0:19:50.64:0,51,368	0/0:24,0:26:51.67:0,52,356	0/0:18,0:18:39.16:0,39,279	0/0:20,0:18:41.69:0,42,300	0/0:27,0:27:62.53:0,63,455	0/0:9,0:8:14.90:0,15,109	0/0:5,0:5:8.93:0,9,64	0/0:10,0:11:14.07:0,14,80	0/0:20,0:20:47.60:0,48,342	0/0:17,0:18:41.50:0,41,301	1/1:6,9:15:5.01:189,5,0	0/0:28,1:30:39.27:0,39,433	1/1:2,9:11:29.56:259,30,0
chr10	37133489	.	G	GA	3106.28	PASS	AB=0.600;AC=13;AF=0.232;AN=56;BaseQRankSum=-10.405;DP=618;FS=0.000;HRun=10;HaplotypeScore=59.2474;InbreedingCoeff=0.8874;MQ=61.89;MQ0=7;MQRankSum=0.331;QD=19.54;ReadPosRankSum=0.857;VQSLOD=4.3918;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,35:45:71.50:934,72,0	0/0:7,0:7:11.62:0,12,98	0/0:28,0:6:11.26:0,11,77	0/0:32,0:13:22.82:0,23,178	0/0:30,0:30:74.87:0,75,615	1/1:5,19:23:32.50:551,32,0	1/1:5,18:23:36.09:384,36,0	0/0:35,0:34:71.86:0,72,591	0/0:8,0:8:14.96:0,15,123	1/1:5,19:24:53.97:558,54,0	1/1:3,12:15:11.41:316,11,0	0/0:17,0:17:38.93:0,39,320	0/0:16,0:16:38.89:0,39,316	0/0:15,0:15:32.89:0,33,265	0/1:4,8:12:0.58:200,0,1	0/0:28,0:28:65.87:0,66,538	0/0:37,1:38:62.89:0,63,712	1/1:3,12:15:14.25:350,14,0	0/0:27,0:26:52.61:0,53,424	0/0:20,1:21:20.32:0,20,354	0/0:14,0:14:34.51:0,35,274	0/0:4,0:4:8.99:0,9,74	0/0:11,0:11:26.95:0,27,221	0/0:25,2:26:4.94:0,5,453	0/0:15,0:15:37.97:0,38,301	0/0:23,1:24:30.92:0,31,457	0/0:36,2:38:54.86:0,55,654	0/0:21,0:22:58.95:0,59,474
chr10	37133912	.	C	CA	2217.28	PASS	AB=0.783;AC=34;AF=0.607;AN=56;BaseQRankSum=5.313;DP=601;FS=10.462;HRun=14;HaplotypeScore=86.6266;InbreedingCoeff=0.6028;MQ=50.60;MQ0=23;MQRankSum=-3.637;QD=5.56;ReadPosRankSum=-2.701;VQSLOD=1.0966;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:16,25:39:26.24:279,0,26	1/1:4,0:7:11.45:60,11,0	0/0:16,0:7:6.70:0,7,39	0/0:12,0:8:1.60:0,2,34	0/0:27,0:28:38.80:0,39,235	0/1:15,4:19:30.34:130,0,30	1/1:7,5:14:14.81:126,15,0	1/1:19,0:27:42.92:219,43,0	0/0:23,0:23:32.75:0,33,242	1/1:12,9:20:7.54:172,8,0	1/1:11,7:18:1.12:100,1,0	0/0:19,0:21:23.40:0,23,133	0/1:13,0:13:2.24:20,0,2	1/1:11,0:20:17.07:89,17,0	0/1:12,10:22:17.54:111,0,18	0/0:29,0:30:50.51:0,51,308	0/0:21,0:23:38.44:0,38,229	1/1:4,7:9:6:53,6,0	1/1:17,1:20:17.89:127,18,0	1/1:22,0:26:28.10:164,28,0	1/1:6,2:12:13.75:81,14,0	1/1:10,0:12:8.61:46,9,0	0/0:14,0:16:30.62:0,31,185	0/0:30,0:30:51.32:0,51,318	1/1:15,0:25:28.52:148,29,0	1/1:10,2:25:22.39:203,22,0	1/1:16,0:31:34.51:195,35,0	1/1:9,4:12:14.52:94,15,0
chr10	37134064	.	TATGAAGCTGAGCGC	T	2717.70	PASS	AB=0.556;AC=3;AF=0.054;AN=56;BaseQRankSum=7.967;DP=694;FS=5.291;HRun=0;HaplotypeScore=261.3357;InbreedingCoeff=0.6437;MQ=82.44;MQ0=0;MQRankSum=-7.081;QD=100.66;ReadPosRankSum=3.368;VQSLOD=3.2239;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,123,8063	0/0:10,0:10:27.09:0,27,1925	0/0:18,0:18:54.19:0,54,3341	0/0:24,0:24:69.24:0,69,3803	0/0:20,0:20:60.21:0,60,3901	0/0:22,0:22:66.23:0,66,4022	0/0:26,0:26:78.27:0,78,5339	0/0:32,0:32:96.33:0,96,5891	0/0:21,0:21:60.21:0,60,3853	0/0:24,0:24:69.23:0,69,3907	0/0:21,0:21:63.22:0,63,4142	0/0:25,0:25:66.23:0,66,4489	0/0:27,0:27:75.24:0,75,4807	0/0:27,0:27:78.27:0,78,5156	0/0:34,0:34:99:0,99,6311	0/0:31,0:31:93.32:0,93,6211	0/0:24,0:23:69.24:0,69,4643	0/0:15,0:15:42.14:0,42,2520	0/0:26,0:25:72.25:0,72,4284	0/0:24,0:24:72.25:0,72,5020	0/0:40,0:40:99:0,120,7966	0/0:27,0:27:78.24:0,78,4957	0/0:23,0:23:69.22:0,69,4279	0/0:33,0:33:87.30:0,87,5442	0/0:12,0:12:36.12:0,36,2000	0/1:4,16:20:99:1914,0,372	0/0:37,0:37:99:0,111,7416	1/1:0,7:7:21.07:908,21,0
chr10	37134986	.	C	CT	4059.94	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-11.339;DP=626;FS=0.000;HRun=9;HaplotypeScore=61.0498;InbreedingCoeff=0.9941;MQ=72.11;MQ0=1;MQRankSum=-0.138;QD=24.46;ReadPosRankSum=3.946;VQSLOD=4.2210;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,31:35:52.11:790,52,0	0/0:7,0:7:15:0,15,130	0/0:24,0:19:27.93:0,28,311	0/0:10,0:10:23.53:0,24,169	0/0:27,1:29:37.85:0,38,546	1/1:3,17:20:39.11:431,39,0	1/1:7,13:20:20.33:349,20,0	0/0:44,0:44:85.41:0,85,881	0/0:15,0:15:29.98:0,30,260	1/1:2,21:23:66.17:723,66,0	1/1:7,17:24:28.09:538,28,0	0/0:18,0:18:47.99:0,48,417	0/0:10,0:10:29.99:0,30,260	0/0:13,0:13:20.71:0,21,203	1/1:3,18:21:54.15:597,54,0	0/0:22,0:22:59.94:0,60,509	0/0:23,0:23:59.98:0,60,520	1/1:4,19:23:57.15:631,57,0	0/0:32,0:32:89.93:0,90,774	0/0:25,1:26:62.97:0,63,547	0/0:11,0:11:23.98:0,24,208	0/0:20,0:20:53.99:0,54,469	0/0:17,0:17:41.98:0,42,365	0/0:21,0:21:53.99:0,54,468	0/0:26,0:26:65.97:0,66,573	0/0:44,0:44:99:0,114,987	0/0:23,0:23:59.98:0,60,521	0/0:25,0:25:59.96:0,60,521
chr10	37136046	.	CCTTTTCTTTT	C	4990.67	PASS	AB=1.000;AC=44;AF=0.786;AN=56;BaseQRankSum=3.816;DP=490;FS=0.000;HRun=0;HaplotypeScore=148.3249;InbreedingCoeff=0.7191;MQ=74.12;MQ0=5;MQRankSum=-3.971;QD=12.86;ReadPosRankSum=-0.517;VQSLOD=3.7722;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:18,3:21:24.05:443,24,0	1/1:4,0:4:3.01:45,3,0	0/0:28,0:14:3.01:0,3,53	0/0:34,0:25:9.47:0,9,98	1/1:6,0:18:17.85:171,18,0	1/1:4,16:20:18.06:413,18,0	1/1:10,8:17:6.02:154,6,0	1/1:26,0:26:20.53:228,21,0	1/1:8,0:18:15.48:301,15,0	1/1:12,5:17:14.89:183,15,0	1/1:9,7:16:15.01:229,15,0	0/0:12,0:12:33.11:0,33,1185	1/1:16,0:16:18.49:158,18,0	1/1:9,0:9:8.97:108,9,0	1/1:15,4:19:24.06:443,24,0	1/1:8,0:23:5.96:139,6,0	1/1:17,0:17:17.65:214,18,0	1/1:14,1:15:30.02:469,30,0	1/1:17,0:16:9.01:120,9,0	1/1:15,0:15:17.99:249,18,0	0/1:13,0:13:0.01:0,0,0	1/1:15,0:15:3.01:171,3,0	0/0:12,0:12:18.53:0,19,584	0/0:16,0:16:42.02:0,42,1527	1/1:21,0:21:31.39:355,31,0	1/1:16,1:17:5.05:95,5,0	1/1:29,0:29:26.85:303,27,0	0/1:4,0:4:0:0,0,0
chr10	37136073	.	TTTTCTTTTC	T	5603.80	PASS	AB=0.993;AC=35;AF=0.625;AN=56;BaseQRankSum=5.398;DP=456;FS=4.731;HRun=0;HaplotypeScore=125.0308;InbreedingCoeff=0.1468;MQ=53.12;MQ0=16;MQRankSum=-3.742;QD=15.97;ReadPosRankSum=1.255;VQSLOD=3.5538;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:21,0:19:71.14:338,0,71	1/1:1,0:1:3.01:59,3,0	0/0:18,0:2:3.48:0,3,53	0/0:29,0:13:12.64:0,13,105	1/1:14,0:14:0.23:138,0,0	1/1:19,1:20:0.49:359,0,0	0/1:13,1:13:50.57:144,0,51	1/1:27,0:22:42.68:377,43,0	0/1:16,0:16:17.83:233,0,18	0/1:10,0:10:55.43:136,0,55	0/1:11,0:11:36.92:185,0,37	0/0:18,0:18:48.01:0,48,1206	1/1:11,0:11:26.66:289,27,0	1/1:13,1:11:21.68:199,22,0	0/1:22,0:22:75.68:412,0,76	0/1:22,0:22:82.37:94,0,82	0/1:18,0:18:90.05:163,0,90	0/1:17,0:17:15.92:455,0,16	1/1:17,0:15:16.41:176,16,0	1/1:10,2:12:31.96:392,32,0	1/1:11,0:11:5.84:42,6,0	1/1:17,1:17:30.28:294,30,0	0/0:11,0:11:33.07:0,33,691	0/0:24,0:23:40.11:0,40,1636	1/1:24,0:24:53.07:535,53,0	1/1:10,0:10:1.97:73,2,0	1/1:21,0:20:48.89:512,49,0	0/0:5,0:4:5.73:0,6,34
chr10	37136074	.	TTTCTTTTC	T	6719.12	PASS	AB=1.000;AC=34;AF=0.607;AN=56;BaseQRankSum=3.909;DP=449;FS=3.048;HRun=0;HaplotypeScore=113.9531;InbreedingCoeff=0.0684;MQ=53.11;MQ0=16;MQRankSum=-5.133;QD=19.09;ReadPosRankSum=-0.132;VQSLOD=4.0016;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:21,0:19:99:321,0,102	1/1:0,1:1:3.01:86,3,0	0/0:16,0:2:3.48:0,3,53	0/0:28,0:12:13.72:0,14,114	0/1:14,0:14:5.58:131,0,6	0/1:20,0:20:5.33:321,0,5	0/1:14,0:13:73.02:118,0,73	1/1:27,0:22:45.77:505,46,0	0/1:16,0:16:36.91:201,0,37	0/1:11,0:11:99:127,0,102	0/1:11,0:11:53.77:179,0,54	0/0:18,0:18:48.12:0,48,1139	1/1:12,0:12:27.06:404,27,0	1/1:13,0:10:25.52:287,26,0	0/1:21,0:21:99:383,0,110	0/1:22,0:22:80.71:81,0,111	0/1:17,0:17:99:150,0,125	0/1:17,0:17:27.52:421,0,28	1/1:9,7:14:18.07:296,18,0	1/1:12,0:12:32.78:499,33,0	1/1:3,7:10:6.39:51,6,0	1/1:4,14:17:35.95:490,36,0	0/0:11,0:11:33.09:0,33,634	0/0:24,0:23:59.63:0,60,1558	1/1:23,2:25:61.19:741,61,0	1/1:9,0:9:10.99:105,11,0	1/1:17,3:19:51.08:812,51,0	0/1:5,0:4:9.82:10,0,34
chr10	37136076	.	TC	T	1504.70	PASS	AB=0.987;AC=22;AF=0.393;AN=56;BaseQRankSum=7.169;DP=441;FS=1.006;HRun=1;HaplotypeScore=86.1326;InbreedingCoeff=-0.4474;MQ=53.18;MQ0=15;MQRankSum=-4.050;QD=4.98;ReadPosRankSum=-1.258;VQSLOD=-0.0404;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:20,0:18:99:126,0,222	1/1:1,0:1:2.84:14,3,0	0/0:14,0:2:3.90:0,4,45	0/0:25,0:11:6.72:0,7,92	0/1:14,0:14:61.10:82,0,61	0/1:21,0:21:24.81:55,0,25	0/0:15,0:14:2.66:0,3,197	0/1:26,0:21:99:121,0,116	0/1:15,1:16:15.79:16,0,81	0/1:11,0:11:56.20:56,0,176	0/1:10,0:10:63.22:63,0,81	0/0:18,0:18:47.39:0,47,645	0/1:11,0:11:49.75:123,0,50	0/1:12,0:9:19.54:34,0,20	0/1:21,0:21:58.61:59,0,334	0/0:23,0:23:11.14:0,11,210	0/1:17,0:17:89.67:90,0,253	0/1:17,0:17:99:138,0,205	0/1:13,1:12:40:40,0,173	0/1:13,0:13:17.92:138,0,18	0/0:9,0:9:5.95:0,6,44	0/1:17,0:17:50.42:78,0,50	0/0:11,0:11:33.10:0,33,464	0/0:24,0:23:64.30:0,64,881	0/1:27,0:27:61.50:229,0,62	1/1:8,1:9:7.42:44,7,0	0/1:19,1:19:49.27:143,0,49	0/1:4,0:3:14.80:15,0,36
chr10	37136079	.	TTTC	T	3073.84	PASS	AB=1.000;AC=33;AF=0.589;AN=56;BaseQRankSum=7.398;DP=457;FS=3.203;HRun=0;HaplotypeScore=94.4232;InbreedingCoeff=0.1295;MQ=49.45;MQ0=16;MQRankSum=-6.402;QD=8.71;ReadPosRankSum=-1.381;VQSLOD=2.6527;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:19,0:17:89.80:90,0,111	1/1:1,0:1:3.01:31,3,0	0/0:14,0:2:2.74:0,3,25	0/0:22,0:8:7.37:0,7,46	0/1:14,0:14:9.57:10,0,21	0/1:21,0:21:5.85:89,0,6	0/1:15,0:14:19.13:19,0,96	1/1:22,4:21:13.67:294,14,0	0/1:16,0:16:40.39:42,0,40	0/0:13,0:12:2.41:0,2,117	0/1:13,0:13:51.65:52,0,80	0/0:19,0:19:51:0,51,566	1/1:10,2:12:26.88:245,27,0	1/1:7,4:8:19.54:195,20,0	0/1:22,0:22:62.29:62,0,186	0/1:24,0:24:3.79:4,0,157	0/1:17,0:17:14.20:14,0,150	0/1:17,0:17:77.47:107,0,77	1/1:15,0:12:16.25:194,16,0	1/1:14,2:16:14.56:340,15,0	1/1:11,0:11:6.39:50,6,0	1/1:18,0:17:29.92:301,30,0	0/0:12,0:12:34.73:0,35,309	0/0:24,0:23:50.69:0,51,788	1/1:23,6:29:69.87:578,70,0	1/1:11,0:11:12.21:61,12,0	1/1:17,2:18:42.02:466,42,0	0/1:6,0:5:10.53:11,0,34
chr10	37136081	.	TC	T	2159.80	PASS	AB=1.000;AC=27;AF=0.482;AN=56;BaseQRankSum=9.362;DP=456;FS=1.087;HRun=1;HaplotypeScore=86.3068;InbreedingCoeff=0.3090;MQ=49.28;MQ0=17;MQRankSum=-5.506;QD=8.09;ReadPosRankSum=-2.331;VQSLOD=0.0891;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:20,0:18:94.29:94,0,116	1/1:1,0:1:2.80:13,3,0	0/0:13,0:2:3:0,3,25	0/0:20,1:8:5.16:0,5,25	0/0:14,0:14:3.57:0,4,37	0/1:21,0:21:21.56:42,0,22	0/0:15,0:14:1.36:0,1,123	1/1:24,0:19:0.74:170,1,0	0/0:16,0:16:0.12:0,0,55	0/0:14,0:13:13.40:0,13,168	0/1:13,0:13:41.44:41,0,70	0/0:20,0:19:44.84:0,45,428	1/1:13,0:13:21.21:179,21,0	1/1:10,0:7:20.11:112,20,0	0/1:22,0:22:24.85:25,0,217	0/0:24,0:24:17.93:0,18,228	0/0:16,0:16:14.26:0,14,220	0/1:16,0:16:61.04:84,0,61	1/1:13,2:12:1.49:91,1,0	1/1:16,0:16:28.99:243,29,0	0/1:12,0:12:2.11:12,0,2	1/1:18,0:17:29.32:178,29,0	0/0:12,0:12:27.72:0,28,266	0/0:24,0:23:53.17:0,53,578	1/1:28,0:28:71.62:460,72,0	1/1:8,4:12:30.63:248,31,0	1/1:18,1:18:40.62:269,41,0	0/1:7,0:6:16.45:80,0,16
chr10	37136155	.	A	AC	1778.18	PASS	AB=0.929;AC=38;AF=0.704;AN=54;BaseQRankSum=-5.630;DP=380;FS=2.073;HRun=9;HaplotypeScore=59.0599;InbreedingCoeff=0.1187;MQ=55.87;MQ0=22;MQRankSum=1.251;QD=5.72;ReadPosRankSum=0.294;VQSLOD=0.5430;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,11:17:18.01:197,18,0	1/1:4,0:4:4.88:20,5,0	0/0:21,0:6:11.73:0,12,89	0/0:14,0:2:5.99:0,6,50	./.	0/1:7,2:8:14:72,0,14	1/1:5,9:13:15.02:155,15,0	0/1:17,1:12:9.52:57,0,10	1/1:3,0:5:8.54:53,9,0	0/1:7,5:11:0:0,0,0	1/1:10,2:11:17.98:170,18,0	1/1:5,0:13:11.52:68,12,0	1/1:9,0:10:15.02:48,15,0	0/1:10,0:10:17.07:35,0,17	1/1:6,10:16:18.04:187,18,0	1/1:8,2:10:21.01:206,21,0	1/1:7,0:11:23.28:151,23,0	1/1:4,11:15:27.12:346,27,0	0/1:19,0:17:21.96:22,0,110	0/1:18,0:19:7.55:8,0,108	0/1:11,0:10:4.12:4,0,34	1/1:4,0:4:4.07:12,4,0	1/1:4,1:6:2.84:14,3,0	1/1:9,0:10:2.84:14,3,0	0/1:17,0:17:32.78:33,0,46	0/0:3,0:28:50.92:0,51,151	0/1:22,0:22:20.48:39,0,20	0/1:5,2:22:31.80:32,0,50
chr10	37136164	.	C	CT	2573.21	PASS	AB=0.939;AC=31;AF=0.554;AN=56;BaseQRankSum=-0.210;DP=341;FS=0.000;HRun=9;HaplotypeScore=47.4438;InbreedingCoeff=0.2850;MQ=56.69;MQ0=20;MQRankSum=-0.352;QD=9.71;ReadPosRankSum=5.678;VQSLOD=0.9167;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:19,0:16:32.80:63,0,33	1/1:0,2:2:6.02:66,6,0	0/0:22,0:6:8.94:0,9,69	0/0:15,0:2:3:0,3,26	0/1:6,0:5:0:0,0,0	0/1:12,0:10:7.75:8,0,91	0/1:10,0:11:7.80:42,0,8	1/1:6,7:9:23.37:204,23,0	0/0:5,0:5:12.16:0,12,65	0/0:8,0:7:5.08:0,5,46	0/1:12,0:11:0.67:17,0,1	0/0:10,0:10:8.79:0,9,71	1/1:3,10:13:1.49:208,1,0	1/1:5,5:10:18.03:189,18,0	1/1:11,0:10:14.66:59,15,0	0/1:9,0:9:14.74:15,0,27	0/0:12,0:11:6.52:0,7,63	0/1:15,0:15:36.19:59,0,36	0/1:16,3:17:12.36:201,0,12	0/1:9,8:18:1.87:180,0,2	1/1:9,2:11:17.33:141,17,0	1/1:1,1:2:6.02:66,6,0	0/0:3,0:3:2.63:0,3,11	0/0:1,0:1:2.68:0,3,11	1/1:9,6:15:24.05:254,24,0	1/1:28,0:28:61.08:412,61,0	1/1:4,16:21:19.86:287,20,0	1/1:17,0:17:46.19:273,46,0
chr10	37139527	.	CTTT	C	3221.60	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=1.161;DP=510;FS=0.000;HRun=15;HaplotypeScore=90.8809;InbreedingCoeff=0.9237;MQ=67.30;MQ0=9;MQRankSum=2.924;QD=17.05;ReadPosRankSum=6.791;VQSLOD=2.5333;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:24:36.45:0,36,510	1/1:3,4:7:3.88:63,4,0	0/0:21,0:17:36.85:0,37,357	0/0:15,0:11:12.35:0,12,110	0/0:20,0:20:40.31:0,40,558	0/0:13,0:13:32.96:0,33,454	0/0:20,0:23:54.29:0,54,767	1/1:13,16:29:41.46:503,41,0	0/0:14,0:17:38.67:0,39,532	0/0:14,0:16:35.62:0,36,449	0/0:12,0:16:28.59:0,29,382	0/0:7,0:6:9.03:0,9,118	1/1:5,14:18:18.43:400,18,0	1/1:7,15:22:38.94:424,39,0	0/0:10,0:17:24.55:0,25,404	0/0:22,0:24:51.14:0,51,822	0/0:25,0:29:58.77:0,59,1060	0/0:14,0:15:33.11:0,33,556	1/1:4,10:13:24.04:269,24,0	1/1:6,12:18:32.93:368,33,0	1/1:3,13:18:32.90:338,33,0	1/1:5,14:20:32.84:354,33,0	0/0:12,0:12:7.57:0,8,93	0/0:5,0:5:2.94:0,3,18	1/1:5,8:14:16.39:182,16,0	0/0:23,0:23:42.37:0,42,496	1/1:7,16:23:48.01:533,48,0	0/0:19,0:19:41.83:0,42,595
chr10	37143915	.	G	GA	2617.13	PASS	AB=0.756;AC=15;AF=0.268;AN=56;BaseQRankSum=-4.766;DP=623;FS=3.567;HRun=11;HaplotypeScore=72.5147;InbreedingCoeff=0.6374;MQ=69.34;MQ0=3;MQRankSum=0.399;QD=15.13;ReadPosRankSum=-0.402;VQSLOD=4.1813;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:9,23:33:32.31:411,0,32	0/0:16,1:17:20.25:0,20,332	0/0:37,0:16:9.49:0,9,68	0/0:32,0:19:3.52:0,4,18	0/0:27,0:27:65.60:0,66,502	1/1:1,17:18:30.06:302,30,0	1/1:1,14:16:29.89:288,30,0	0/0:21,0:21:41.78:0,42,324	0/0:17,0:18:49.82:0,50,374	1/1:5,17:24:50.02:509,50,0	1/1:3,17:20:45.09:453,45,0	0/1:15,3:18:19.95:20,0,216	0/0:13,0:13:32.70:0,33,254	0/0:17,0:18:46.46:0,46,340	1/1:5,16:21:1.69:380,2,0	0/0:23,1:24:31.35:0,31,414	0/0:20,0:20:53.12:0,53,396	1/1:1,17:18:42.08:422,42,0	0/0:22,0:22:35.26:0,35,394	0/0:30,0:30:74.64:0,75,573	0/0:24,0:24:62.68:0,63,483	0/0:17,0:17:41.82:0,42,325	0/0:22,0:24:66.81:0,67,495	0/0:33,0:34:82.26:0,82,617	0/0:16,0:16:41.83:0,42,325	0/0:24,3:27:5.44:0,5,404	0/0:29,0:29:53.40:0,53,596	0/1:4,1:5:18.48:18,0,58
chr10	37147626	.	C	CT	3804.10	PASS	AB=0.833;AC=15;AF=0.268;AN=56;BaseQRankSum=-11.500;DP=629;FS=3.861;HRun=10;HaplotypeScore=66.3777;InbreedingCoeff=0.8746;MQ=64.39;MQ0=2;MQRankSum=0.015;QD=21.74;ReadPosRankSum=2.464;VQSLOD=4.8083;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,36:44:74.17:992,74,0	0/1:4,1:5:20.01:20,0,62	0/0:20,0:14:23.21:0,23,182	0/0:15,0:9:2.87:0,3,76	0/0:29,1:30:42.90:0,43,559	1/1:8,17:25:23.48:455,23,0	1/1:1,13:14:27.06:282,27,0	0/0:38,0:39:85.92:0,86,695	0/0:18,0:18:44.93:0,45,367	1/1:4,19:23:47.37:593,47,0	1/1:4,14:18:14.41:347,14,0	0/0:21,0:21:49.95:0,50,396	0/0:20,0:20:56.93:0,57,467	0/0:18,0:18:47.92:0,48,389	1/1:1,19:21:45.98:508,46,0	0/0:14,0:14:31.17:0,31,268	0/0:34,1:35:81.15:0,81,724	1/1:4,21:25:38.54:606,39,0	0/0:26,0:26:53.90:0,54,440	0/0:28,0:28:71.88:0,72,587	0/0:11,0:11:17.96:0,18,148	0/0:13,0:13:29.85:0,30,248	0/0:20,0:20:53.90:0,54,438	0/0:37,0:37:99:0,105,859	0/0:22,0:21:50.22:0,50,416	0/0:15,0:15:29.94:0,30,244	0/0:20,0:20:50.85:0,51,409	0/0:32,0:32:74.80:0,75,604
chr10	37149802	.	G	GC	725.89	PASS	AB=0.753;AC=16;AF=0.286;AN=56;BaseQRankSum=-2.037;DP=437;FS=3.273;HRun=11;HaplotypeScore=56.1773;InbreedingCoeff=0.0455;MQ=74.40;MQ0=3;MQRankSum=-1.734;QD=3.46;ReadPosRankSum=-1.232;VQSLOD=-0.5615;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:40.75:0,41,295	1/1:1,3:4:3.01:30,3,0	0/0:21,0:20:32.53:0,33,236	0/0:19,0:17:20.72:0,21,163	0/1:16,8:24:28.92:77,0,29	0/0:14,0:14:12.80:0,13,95	0/0:22,0:22:48.65:0,49,369	0/1:13,5:18:9.81:63,0,10	0/1:10,5:14:17.18:24,0,17	0/0:10,0:10:2.95:0,3,23	0/0:8,0:8:11.94:0,12,91	0/0:16,0:18:31.85:0,32,231	0/1:11,4:15:23.57:24,0,36	0/1:8,5:13:25.52:43,0,26	0/0:15,0:15:23.63:0,24,185	0/1:8,13:21:2.19:162,0,2	0/1:11,11:22:5.20:134,0,5	0/0:15,0:21:32.46:0,32,225	0/1:8,0:8:0:0,0,0	1/1:2,5:7:14.72:117,15,0	0/1:21,2:23:33.14:68,0,33	0/1:4,6:10:14.25:43,0,14	0/0:8,0:9:20.88:0,21,157	0/0:16,1:17:2.77:0,3,152	0/1:7,5:12:4.02:79,0,4	0/0:9,0:12:18.03:0,18,109	0/1:10,7:17:18.72:19,0,55	0/0:10,0:10:14.86:0,15,108
chr10	37152787	.	CAG	C	1255.58	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.181;DP=566;FS=2.263;HRun=0;HaplotypeScore=69.4574;InbreedingCoeff=0.9842;MQ=89.00;MQ0=0;MQRankSum=-0.096;QD=39.24;ReadPosRankSum=0.564;VQSLOD=5.1990;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,147,2786	0/0:8,0:8:24.08:0,24,463	0/0:25,0:25:53.57:0,54,1086	0/0:18,0:18:13.40:0,13,719	0/0:17,0:17:48.16:0,48,926	0/0:20,0:20:60.21:0,60,1159	0/0:24,0:24:69.24:0,69,1324	0/0:30,0:30:87.30:0,87,1671	0/0:17,0:17:48.16:0,48,927	0/0:11,0:11:33.11:0,33,638	0/0:9,0:9:27.09:0,27,513	0/0:21,0:21:63.22:0,63,1216	0/0:19,0:19:57.20:0,57,1101	0/0:19,0:19:57.17:0,57,1035	0/0:13,0:13:39.13:0,39,753	0/0:14,0:14:42.14:0,42,802	0/0:35,0:35:99:0,102,1969	0/0:22,0:22:66.23:0,66,1258	0/0:25,0:25:75.24:0,75,1402	0/0:13,0:13:36.12:0,36,695	0/0:40,0:40:99:0,114,2125	0/0:14,0:14:39.11:0,39,709	0/0:8,0:8:21.07:0,21,405	0/0:26,0:26:78.25:0,78,1472	0/0:20,0:19:57.20:0,57,1099	1/1:0,21:21:63.16:918,63,0	0/0:16,0:16:48.16:0,48,927	1/1:0,11:11:30.10:459,30,0
chr10	37152950	.	T	TGA	19643.86	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-14.862;DP=686;FS=1.559;HRun=0;HaplotypeScore=81.6509;InbreedingCoeff=0.9591;MQ=80.88;MQ0=4;MQRankSum=-4.712;QD=38.75;ReadPosRankSum=4.933;VQSLOD=6.7626;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,34:38:84.29:1440,84,0	1/1:0,8:8:12.04:206,12,0	0/0:28,0:28:60.16:0,60,753	0/0:46,0:42:58.14:0,58,817	0/0:19,0:19:54.15:0,54,678	1/1:1,23:23:57.19:965,57,0	1/1:2,12:14:33.11:566,33,0	1/1:8,26:35:78.24:1274,78,0	0/0:27,0:27:72.17:0,72,883	1/1:2,24:27:72.23:1205,72,0	1/1:3,13:16:30.10:500,30,0	1/1:5,23:28:60.21:1029,60,0	1/1:3,14:17:32.98:566,33,0	1/1:4,17:22:42.14:714,42,0	1/1:0,27:27:72.25:1234,72,0	0/0:25,0:25:72.23:0,72,946	0/0:34,0:34:93.30:0,93,1221	1/1:3,21:24:60.21:1028,60,0	1/1:8,15:23:45.15:742,45,0	1/1:1,21:23:57.19:951,57,0	1/1:3,26:29:66.23:1132,66,0	1/1:3,21:24:48.16:823,48,0	1/1:3,15:17:36.12:617,36,0	1/1:1,37:38:99:1697,99,0	1/1:2,19:19:39.13:669,39,0	1/1:0,25:25:75.26:1286,75,0	1/1:2,17:18:57.18:949,57,0	1/1:1,5:6:3.01:51,3,0
chr10	37153750	.	A	AC	2226.79	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-6.912;DP=394;FS=19.990;HRun=7;HaplotypeScore=45.8708;InbreedingCoeff=0.9548;MQ=75.31;MQ0=1;MQRankSum=-0.288;QD=22.05;ReadPosRankSum=-0.467;VQSLOD=1.8059;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:78.07:0,78,732	1/1:2,6:8:8.77:108,9,0	0/0:16,0:15:38.86:0,39,327	0/0:18,0:15:17.51:0,18,153	0/0:13,0:13:36.05:0,36,342	0/0:15,0:15:32.07:0,32,295	0/0:18,0:18:48.04:0,48,450	1/1:3,13:16:33.10:397,33,0	0/0:14,0:14:42.06:0,42,400	0/0:12,0:12:21.02:0,21,199	0/0:8,0:8:20.95:0,21,190	0/0:15,0:15:30.03:0,30,289	1/1:3,3:6:9.03:109,9,0	1/1:1,7:8:15.05:181,15,0	0/0:23,0:23:63.08:0,63,602	0/0:11,0:11:30.52:0,31,290	0/0:28,0:28:72.10:0,72,693	0/0:20,0:20:48.10:0,48,503	1/1:2,8:10:24.07:290,24,0	1/1:0,3:3:5.98:56,6,0	1/1:3,22:25:54.16:651,54,0	1/1:0,6:6:18.05:216,18,0	0/0:13,0:13:33.05:0,33,319	0/0:9,0:9:24.04:0,24,231	1/1:0,9:9:18.06:217,18,0	0/0:22,0:22:57.09:0,57,550	1/1:3,6:10:18.05:214,18,0	0/0:7,0:7:16.26:0,16,147
chr10	37153939	.	C	CA	18189.84	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-13.547;DP=555;FS=1.160;HRun=0;HaplotypeScore=49.6625;InbreedingCoeff=0.9980;MQ=97.00;MQ0=1;MQRankSum=-7.329;QD=44.04;ReadPosRankSum=2.252;VQSLOD=5.2055;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,28:29:78.20:1215,78,0	1/1:1,9:10:30.10:464,30,0	0/0:38,0:38:99:0,114,1523	0/0:18,0:17:45.09:0,45,567	0/0:15,0:15:42.14:0,42,586	1/1:0,17:17:45.15:718,45,0	1/1:0,21:21:60.20:957,60,0	1/1:0,31:31:93.25:1391,93,0	0/0:18,0:18:54.15:0,54,720	1/1:0,10:10:30.07:433,30,0	1/1:0,13:13:30.10:479,30,0	1/1:0,21:21:57.19:910,57,0	1/1:0,15:15:41.92:671,42,0	1/1:0,14:14:39.13:623,39,0	1/1:0,29:29:87.30:1389,87,0	0/0:16,0:16:48.14:0,48,652	0/0:37,0:37:99:0,108,1439	1/1:0,13:13:39.08:594,39,0	1/1:1,28:29:84.24:1288,84,0	1/1:0,12:12:36.12:575,36,0	1/1:0,19:19:51.17:814,51,0	1/1:0,16:16:45.07:687,45,0	1/1:1,21:22:60.20:958,60,0	1/1:2,22:24:60.20:958,60,0	1/1:1,13:14:39.13:623,39,0	1/1:0,21:21:63.21:1007,63,0	1/1:0,26:25:72.25:1149,72,0	1/1:0,7:7:18.06:287,18,0
chr10	37154740	.	CT	C	5347.06	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=13.127;DP=572;FS=21.755;HRun=7;HaplotypeScore=58.9138;InbreedingCoeff=0.9809;MQ=72.89;MQ0=1;MQRankSum=0.489;QD=25.71;ReadPosRankSum=2.218;VQSLOD=3.2574;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:84.23:0,84,1034	1/1:1,4:5:9.02:92,9,0	0/0:28,0:18:7.99:0,8,438	0/0:29,0:21:33.73:0,34,449	0/0:19,0:19:48.15:0,48,601	0/0:16,0:16:42.13:0,42,528	0/0:21,0:21:45.18:0,45,701	1/1:3,19:22:57.10:568,57,0	0/0:14,0:14:42.13:0,42,528	0/0:16,0:16:45.14:0,45,566	0/0:18,0:18:51.16:0,51,640	0/0:22,0:22:66.20:0,66,817	1/1:1,14:15:39.09:398,39,0	1/1:4,10:14:24.05:245,24,0	0/0:27,0:27:72.23:0,72,905	0/0:26,0:26:75.70:0,76,931	0/0:25,0:25:72.20:0,72,872	0/0:31,0:31:81.26:0,81,1017	1/1:4,10:14:33.06:332,33,0	1/1:0,17:17:45.06:446,45,0	1/1:0,7:7:21.05:214,21,0	1/1:1,14:15:39.09:398,39,0	0/0:22,0:22:63.19:0,63,779	0/0:21,0:21:60.19:0,60,755	1/1:0,24:24:72.16:735,72,0	1/1:3,24:27:72.14:727,72,0	1/1:1,28:29:75.17:765,75,0	1/1:0,19:19:42.10:428,42,0
chr10	37154969	.	TA	T	1185.09	PASS	AB=0.847;AC=25;AF=0.446;AN=56;BaseQRankSum=-3.276;DP=523;FS=8.304;HRun=15;HaplotypeScore=77.2446;InbreedingCoeff=0.6721;MQ=68.37;MQ0=4;MQRankSum=-0.387;QD=5.67;ReadPosRankSum=3.589;VQSLOD=2.3768;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:23:34.58:0,35,200	0/1:3,3:6:11.57:46,0,12	0/0:36,0:14:23.18:0,23,143	0/0:39,0:16:4.53:0,5,94	0/1:21,4:28:13.17:13,0,233	0/0:6,0:23:34.25:0,34,183	0/0:6,0:16:25.85:0,26,142	1/1:12,9:22:11.61:160,12,0	0/0:9,2:11:1.66:0,2,125	0/0:7,0:16:23.97:0,24,123	0/0:16,0:30:49.07:0,49,298	1/1:4,0:9:8.12:23,8,0	1/1:3,12:15:25.38:162,25,0	0/1:7,0:7:0.56:1,0,21	0/0:7,0:15:14.36:0,14,81	0/0:22,1:23:10.03:0,10,310	0/0:31,2:33:0.68:0,1,393	0/0:3,0:11:20.10:0,20,109	1/1:7,4:12:24.72:145,25,0	1/1:9,15:24:26.41:233,26,0	1/1:3,4:8:13.80:83,14,0	1/1:3,9:13:25.37:151,25,0	1/1:8,0:16:8.08:23,8,0	1/1:4,0:13:14.24:41,14,0	1/1:3,9:14:21.69:127,22,0	0/0:9,0:21:33.46:0,33,197	1/1:8,12:21:1.78:179,2,0	0/0:5,0:14:17.04:0,17,86
chr10	37158123	.	TG	T	3088.68	PASS	AB=0.860;AC=38;AF=0.679;AN=56;BaseQRankSum=1.847;DP=507;FS=5.850;HRun=11;HaplotypeScore=88.9979;InbreedingCoeff=0.1707;MQ=65.09;MQ0=5;MQRankSum=1.867;QD=7.57;ReadPosRankSum=7.421;VQSLOD=1.7325;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:28,2:31:57.35:57,0,245	1/1:3,3:6:8.97:74,9,0	0/1:28,1:11:2.82:3,0,70	0/0:27,2:15:20.17:0,20,156	0/1:8,3:11:38.77:81,0,39	0/1:21,1:22:38.88:39,0,157	0/1:12,2:14:46.88:47,0,116	0/1:11,8:18:4.87:119,0,5	0/1:12,3:15:64.54:65,0,169	0/1:11,2:14:33.91:34,0,58	0/1:9,3:12:56.16:56,0,70	1/1:8,12:21:25.87:192,26,0	1/1:4,7:11:23.97:197,24,0	1/1:4,7:11:20.94:167,21,0	0/1:15,2:17:13.99:14,0,199	0/0:14,0:14:33:0,33,295	0/0:30,0:31:34.51:0,35,520	0/0:22,1:23:5.99:0,6,367	1/1:7,8:16:32.05:266,32,0	1/1:17,5:24:36.96:281,37,0	1/1:9,7:16:17.96:146,18,0	1/1:5,9:15:19.78:153,20,0	1/1:5,6:11:17.94:145,18,0	1/1:11,13:23:56.86:458,57,0	1/1:6,8:14:23.94:194,24,0	1/1:12,6:18:2.55:128,3,0	1/1:10,13:25:42.72:304,43,0	1/1:8,3:11:5.93:49,6,0
chr10	37158554	.	T	TA	1575.86	PASS	AB=0.819;AC=23;AF=0.411;AN=56;BaseQRankSum=-4.424;DP=609;FS=1.557;HRun=15;HaplotypeScore=86.8574;InbreedingCoeff=0.6067;MQ=70.26;MQ0=1;MQRankSum=1.464;QD=5.69;ReadPosRankSum=-4.287;VQSLOD=1.6810;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:34:46.63:0,47,263	1/1:4,7:11:14.90:115,15,0	0/0:27,0:19:9.63:0,10,83	0/0:16,0:15:5.29:0,5,42	0/0:20,1:24:12.64:0,13,169	0/0:13,1:15:9.15:0,9,157	0/1:11,1:13:11.71:12,0,123	1/1:14,14:29:18.08:271,18,0	0/0:23,5:29:22.13:0,22,127	0/1:23,0:23:9.14:9,0,155	0/0:20,0:20:25.92:0,26,149	0/0:7,0:23:20.62:0,21,61	0/1:16,0:16:14:73,0,14	1/1:13,0:13:6.82:103,7,0	0/0:32,2:34:55.44:0,55,338	0/0:19,0:19:19.40:0,19,194	0/0:27,0:26:43.03:0,43,257	0/0:24,0:26:42.87:0,43,252	1/1:8,10:20:23.66:205,24,0	0/1:8,13:21:4.78:158,0,5	1/1:8,18:27:24.29:191,24,0	1/1:7,14:21:20.53:184,21,0	0/0:1,0:13:14.09:0,14,41	0/0:11,0:24:26.54:0,27,77	0/1:5,8:14:6.20:31,0,6	1/1:12,3:27:37.97:242,38,0	1/1:8,19:27:20.55:157,21,0	1/1:9,0:15:5.68:29,6,0
chr10	37162942	.	ACCGGTCAGGTTCACAGAAC	A	1467.14	PASS	AB=0.679;AC=3;AF=0.054;AN=56;BaseQRankSum=5.864;DP=757;FS=0.000;HRun=0;HaplotypeScore=363.4362;InbreedingCoeff=0.5895;MQ=79.40;MQ0=0;MQRankSum=-3.941;QD=45.85;ReadPosRankSum=0.211;VQSLOD=1.5819;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:81.25:0,81,6500	0/0:14,0:14:33.11:0,33,2808	0/0:15,0:15:18.06:0,18,1119	0/0:27,0:27:27.07:0,27,1232	0/0:17,0:17:42.14:0,42,3460	0/0:21,0:21:51.18:0,51,4115	0/0:42,0:42:99:0,99,7363	0/0:30,0:30:42.14:0,42,2573	0/0:35,0:35:81.26:0,81,6008	0/0:28,0:28:66.22:0,66,5361	0/0:12,0:12:36.12:0,36,3044	0/0:46,0:46:96.33:0,96,7698	0/0:24,0:24:45.13:0,45,3625	0/0:26,0:26:60.21:0,60,4765	0/0:35,0:35:78.27:0,78,6801	0/0:35,0:35:87.29:0,87,6482	0/0:30,0:30:60.21:0,60,4998	0/0:31,0:31:69.21:0,69,5305	0/0:25,0:25:30.10:0,30,2210	0/0:11,0:11:27.08:0,27,1994	0/0:68,0:68:99:0,169,12211	0/0:21,0:21:54.19:0,54,4694	0/0:20,0:20:45.15:0,45,3575	0/0:34,0:34:81.28:0,81,6216	0/0:19,0:19:36.12:0,36,3003	0/1:10,9:19:99:1103,0,238	0/0:24,0:23:63.16:0,63,4269	1/1:6,7:13:9.03:462,9,0
chr10	37163895	.	A	AT	7082.04	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-2.762;DP=465;FS=3.844;HRun=9;HaplotypeScore=65.1858;InbreedingCoeff=0.8714;MQ=65.52;MQ0=4;MQRankSum=-1.096;QD=15.91;ReadPosRankSum=3.284;VQSLOD=5.2773;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:31,0:31:76.56:485,77,0	1/1:12,0:12:31.47:177,31,0	0/0:11,0:5:6.76:0,7,43	0/0:9,0:4:8.27:0,8,39	1/1:4,21:26:39.92:637,40,0	1/1:15,0:15:32.25:198,32,0	1/1:12,0:12:20.61:126,21,0	1/1:31,0:31:79.97:421,80,0	1/1:1,12:13:36.10:398,36,0	1/1:19,0:18:48.58:269,49,0	1/1:14,0:14:32.01:189,32,0	1/1:8,0:8:11.57:66,12,0	1/1:9,0:9:20.40:120,20,0	1/1:6,0:6:14.71:89,15,0	1/1:11,0:11:31.77:180,32,0	1/1:5,8:13:24.06:266,24,0	1/1:2,25:28:69.02:744,69,0	1/1:32,0:32:85:517,85,0	1/1:20,0:20:46.96:233,47,0	1/1:17,0:17:46.69:276,47,0	1/1:11,0:10:20.18:115,20,0	1/1:9,0:9:25.37:138,25,0	1/1:15,0:15:38.27:234,38,0	1/1:9,0:9:17.48:104,17,0	1/1:28,0:28:75.26:429,75,0	1/1:11,0:17:37.21:200,37,0	1/1:22,0:22:58.55:356,59,0	1/1:0,4:16:22.97:116,23,0
chr10	37163898	.	T	TA	12238.95	PASS	AB=0.921;AC=44;AF=0.786;AN=56;BaseQRankSum=-9.030;DP=485;FS=2.705;HRun=0;HaplotypeScore=48.0980;InbreedingCoeff=0.4285;MQ=65.91;MQ0=4;MQRankSum=0.835;QD=27.94;ReadPosRankSum=4.858;VQSLOD=5.5490;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,35:37:78.25:1102,78,0	1/1:0,11:11:33.11:443,33,0	0/1:10,0:5:0.36:0,0,78	0/0:9,0:5:11.31:0,11,92	0/1:27,0:27:71.71:72,0,119	1/1:0,17:17:33.11:466,33,0	1/1:0,12:12:21.07:300,21,0	1/1:0,32:32:96.25:1236,96,0	0/1:14,0:14:22.01:45,0,22	1/1:1,18:18:54.15:734,54,0	1/1:0,15:15:36.03:477,36,0	1/1:0,7:7:12.04:166,12,0	1/1:1,9:10:21.06:295,21,0	1/1:0,6:6:15.05:214,15,0	1/1:0,11:11:33.11:455,33,0	0/1:13,0:13:15.18:15,0,107	0/1:28,0:28:9.22:87,0,9	1/1:1,32:33:87.29:1226,87,0	1/1:0,21:21:63.13:795,63,0	1/1:0,20:20:54.05:711,54,0	1/1:1,9:9:26.94:324,27,0	1/1:0,11:11:30.02:363,30,0	1/1:0,14:14:39.13:557,39,0	0/1:1,9:10:4.76:230,0,5	1/1:0,28:28:78.26:1087,78,0	0/0:21,1:21:9.40:0,9,291	1/1:0,22:22:60.20:840,60,0	0/0:16,0:16:23.13:0,23,131
chr10	37171058	.	AC	A	8017.58	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=11.157;DP=592;FS=5.393;HRun=1;HaplotypeScore=61.4194;InbreedingCoeff=0.9930;MQ=89.16;MQ0=0;MQRankSum=-2.447;QD=40.49;ReadPosRankSum=2.319;VQSLOD=5.5456;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:37:99:0,111,1774	1/1:0,4:4:12.04:168,12,0	0/0:23,0:23:69.22:0,69,1039	0/0:20,0:20:54.18:0,54,852	0/0:12,0:12:36.11:0,36,552	0/0:20,0:20:60.20:0,60,954	0/0:25,0:25:75.26:0,75,1194	1/1:0,26:26:75.24:1033,75,0	0/0:26,0:26:78.25:0,78,1224	0/0:23,0:23:66.23:0,66,1056	0/0:12,0:12:33.11:0,33,526	0/0:26,0:26:78.25:0,78,1220	1/1:0,17:17:51.17:713,51,0	1/1:0,19:19:51.17:713,51,0	0/0:30,0:30:90.29:0,90,1416	0/0:23,0:23:69.24:0,69,1103	0/0:31,0:31:93.29:0,93,1461	0/0:19,0:19:48.13:0,48,734	1/1:0,17:17:51.15:691,51,0	1/1:0,12:12:36.12:504,36,0	1/1:0,46:46:99:1846,132,0	1/1:0,17:17:51.17:713,51,0	0/0:15,0:15:42.14:0,42,671	0/0:23,0:23:69.19:0,69,1070	1/1:0,17:17:51.17:713,51,0	0/0:22,0:22:66.21:0,66,1033	1/1:1,22:23:66.20:922,66,0	0/0:6,0:6:15.05:0,15,240
chr10	37172583	.	T	TA	5030.62	PASS	AB=0.939;AC=26;AF=0.464;AN=56;BaseQRankSum=-9.763;DP=473;FS=6.566;HRun=9;HaplotypeScore=50.4912;InbreedingCoeff=0.8296;MQ=67.35;MQ0=0;MQRankSum=-1.623;QD=20.53;ReadPosRankSum=-1.590;VQSLOD=4.6563;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,1:19:41.97:0,42,364	1/1:1,10:11:4.07:273,4,0	0/1:19,0:18:12.78:13,0,174	0/0:15,0:14:1.25:0,1,166	0/0:19,0:19:44.98:0,45,391	0/0:18,0:18:50.97:0,51,439	0/0:10,0:10:29.99:0,30,260	1/1:11,21:32:57.10:608,57,0	0/0:10,0:10:26.97:0,27,229	0/0:24,0:24:65.97:0,66,569	0/0:16,0:16:44.97:0,45,387	0/0:9,0:9:23.99:0,24,208	1/1:2,10:12:27.07:299,27,0	1/1:1,12:13:33.09:365,33,0	0/0:19,0:19:44.98:0,45,391	0/0:19,0:19:53.98:0,54,469	0/1:22,2:24:0.37:0,0,455	0/0:22,0:22:56.97:0,57,490	1/1:3,15:18:45.10:487,45,0	1/1:3,17:20:45.08:484,45,0	1/1:0,13:13:36.10:398,36,0	1/1:4,9:13:21.02:219,21,0	0/0:13,0:13:35.99:0,36,312	0/0:13,0:13:32.99:0,33,287	1/1:4,10:14:7.03:306,7,0	1/1:3,26:29:55.13:818,55,0	1/1:1,13:14:36.10:398,36,0	1/1:0,11:11:33.09:362,33,0
chr10	37172821	.	TAATCTAACGGTATC	T	1270.10	PASS	AB=0.724;AC=1;AF=0.018;AN=56;BaseQRankSum=3.369;DP=492;FS=0.000;HRun=0;HaplotypeScore=211.4307;InbreedingCoeff=-0.0248;MQ=72.71;MQ0=0;MQRankSum=-5.262;QD=60.48;ReadPosRankSum=-0.578;VQSLOD=3.2034;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,99,6328	0/0:7,0:7:21.07:0,21,1306	0/0:21,0:19:55.24:0,55,2595	0/0:14,0:13:35.18:0,35,1289	0/0:14,0:14:42.14:0,42,2595	0/0:21,0:21:63.22:0,63,4053	0/0:26,0:26:78.27:0,78,5138	0/0:25,0:25:66.23:0,66,3749	0/0:7,0:7:21.07:0,21,1438	0/0:23,0:23:69.24:0,69,4194	0/0:19,0:19:57.20:0,57,3831	0/0:18,0:18:51.17:0,51,2842	0/0:13,0:13:39.13:0,39,2325	0/0:17,0:17:51.18:0,51,3129	0/0:16,0:16:48.16:0,48,3099	0/0:12,0:12:36.12:0,36,2051	0/0:40,0:40:99:0,117,7507	0/0:27,0:27:78.24:0,78,4874	0/0:16,0:16:45.10:0,45,2594	0/0:9,0:9:27.09:0,27,1613	0/0:16,0:16:48.16:0,48,2801	0/0:12,0:12:32.61:0,33,1913	0/0:10,0:10:30.10:0,30,1818	0/0:14,0:14:39.13:0,39,2220	0/0:17,0:17:51.18:0,51,3390	0/1:13,8:21:99:1344,0,1100	0/0:19,0:19:57.20:0,57,3783	0/0:4,0:4:3.01:0,3,180
chr10	37172835	.	C	CT	972.33	PASS	AB=0.994;AC=14;AF=0.250;AN=56;BaseQRankSum=-3.481;DP=494;FS=5.285;HRun=10;HaplotypeScore=87.5178;InbreedingCoeff=0.4486;MQ=63.08;MQ0=3;MQRankSum=-1.636;QD=7.26;ReadPosRankSum=-1.656;VQSLOD=1.9404;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,1:36:45.91:0,46,584	0/1:6,0:6:9.52:10,0,42	0/1:18,0:14:29.47:29,0,95	0/1:8,0:5:0.79:1,0,19	0/0:14,1:15:6.57:0,7,249	0/0:19,0:19:41.94:0,42,345	0/0:26,0:27:58.88:0,59,467	0/0:20,0:20:38.78:0,39,165	0/0:10,0:10:20.94:0,21,172	0/0:21,0:21:53.93:0,54,443	0/0:22,0:22:44.90:0,45,366	1/1:1,12:14:35.92:366,36,0	0/0:12,0:12:22.49:0,22,96	0/0:17,0:17:28.68:0,29,113	0/0:16,0:15:35.94:0,36,296	0/0:14,0:13:26.94:0,27,222	0/0:37,2:39:40.50:0,40,734	0/0:23,0:23:56.88:0,57,462	0/0:19,0:19:27.55:0,28,127	0/1:13,0:13:8.11:8,0,36	0/0:9,0:9:1.57:0,2,75	0/1:14,0:13:5.50:6,0,47	1/1:3,9:13:30.02:299,30,0	1/1:2,12:14:30.08:320,30,0	0/0:18,0:18:40.37:0,40,173	0/1:25,0:25:9.04:46,0,9	0/0:23,0:22:49.33:0,49,225	1/1:4,0:8:8.72:56,9,0
chr10	37172843	.	TTTG	T	187.58	PASS	AB=0.938;AC=4;AF=0.071;AN=56;BaseQRankSum=3.915;DP=483;FS=2.544;HRun=0;HaplotypeScore=98.8807;InbreedingCoeff=-0.0738;MQ=57.69;MQ0=6;MQRankSum=-7.360;QD=2.37;ReadPosRankSum=-4.302;VQSLOD=0.8043;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:90.22:0,90,1898	0/0:6,0:6:18.05:0,18,204	0/0:14,0:10:27.02:0,27,479	0/0:5,0:2:6.02:0,6,112	0/0:16,0:15:39.13:0,39,882	0/0:18,0:17:48.11:0,48,1016	0/0:25,0:25:75.12:0,75,1465	0/1:21,0:21:3.70:4,0,532	0/0:11,0:11:30.10:0,30,620	0/0:19,0:19:57.19:0,57,1284	0/0:18,0:18:54.18:0,54,1145	0/0:17,0:17:48.04:0,48,686	0/0:13,0:13:9.70:0,10,301	0/0:15,0:15:35.12:0,35,379	0/0:15,0:14:39.13:0,39,880	0/0:14,0:13:33.11:0,33,737	0/0:40,0:40:99:0,117,2490	0/0:24,0:24:66.20:0,66,1398	0/1:20,0:20:18.81:19,0,477	0/0:12,0:12:24.06:0,24,272	0/0:9,0:9:27.08:0,27,316	0/1:14,0:13:5.02:5,0,275	0/0:13,0:13:36.10:0,36,539	0/0:16,0:15:36.10:0,36,557	0/0:18,0:18:24.68:0,25,510	0/1:16,8:23:99:255,0,129	0/0:23,0:22:18.55:0,19,614	0/0:9,0:9:11.90:0,12,91
chr10	37172851	.	C	CT	158.14	PASS	AB=0.879;AC=2;AF=0.036;AN=56;BaseQRankSum=5.127;DP=485;FS=1.302;HRun=7;HaplotypeScore=83.4018;InbreedingCoeff=-0.0425;MQ=55.35;MQ0=11;MQRankSum=-3.868;QD=4.39;ReadPosRankSum=0.026;VQSLOD=-0.2253;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:75.11:0,75,724	0/0:6,0:6:18.03:0,18,174	0/1:11,0:8:23.55:24,0,48	0/0:3,1:1:2.99:0,3,24	0/0:16,0:15:30.04:0,30,290	0/0:17,0:16:42.06:0,42,405	0/0:25,0:25:66.10:0,66,636	0/0:22,0:22:42.05:0,42,404	0/0:11,0:11:27.02:0,27,252	0/0:17,0:17:45.07:0,45,432	0/0:16,0:16:39.06:0,39,376	0/0:20,0:20:54.01:0,54,500	0/0:15,0:14:33.03:0,33,312	0/0:22,0:21:57.07:0,57,539	0/0:15,0:14:24.03:0,24,232	0/0:13,0:12:24.02:0,24,226	0/0:43,0:43:99:0,105,1006	0/0:24,0:24:51.07:0,51,492	0/0:19,0:18:45.02:0,45,422	0/0:13,0:13:30.03:0,30,284	0/0:8,0:8:24.02:0,24,225	0/0:14,0:12:27.51:0,28,261	0/0:12,0:12:20.53:0,21,202	0/0:15,0:13:33.05:0,33,318	0/0:19,0:19:51.07:0,51,488	0/1:17,8:23:99:223,0,102	0/0:23,0:22:47.96:0,48,447	0/0:7,0:7:18.03:0,18,173
chr10	37173993	.	C	CT	1982.63	PASS	AB=0.794;AC=14;AF=0.250;AN=56;BaseQRankSum=-7.028;DP=505;FS=4.229;HRun=12;HaplotypeScore=56.4748;InbreedingCoeff=0.7115;MQ=64.73;MQ0=8;MQRankSum=2.311;QD=13.04;ReadPosRankSum=0.373;VQSLOD=3.6612;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,19:20:41.56:389,42,0	0/0:10,0:10:26.80:0,27,193	0/0:23,0:7:2.86:0,3,17	0/1:23,0:12:1.38:1,0,24	0/0:28,0:28:59.45:0,59,435	1/1:2,13:16:32.99:310,33,0	0/1:3,7:9:9.89:76,0,10	0/0:29,2:29:5.52:0,6,333	0/0:13,0:12:32.79:0,33,238	1/1:7,21:28:57.06:539,57,0	1/1:5,10:16:5.13:211,5,0	0/0:7,0:7:2.91:0,3,93	0/0:12,0:12:23.80:0,24,171	0/0:13,0:12:29.80:0,30,216	1/1:2,13:15:8.15:241,8,0	0/0:6,0:6:11.93:0,12,88	0/0:29,0:29:51.86:0,52,459	1/1:3,21:24:29.25:393,29,0	0/0:33,0:31:56.48:0,56,403	0/0:13,0:13:4.86:0,5,167	0/0:12,0:12:20.84:0,21,151	0/0:6,0:6:14.89:0,15,109	0/0:16,0:16:32.70:0,33,241	0/0:14,0:15:31.86:0,32,225	0/0:22,0:23:52.73:0,53,378	0/0:7,1:35:32.12:0,32,148	0/0:15,0:15:29.82:0,30,219	0/0:1,0:11:21.32:0,21,75
chr10	37174198	.	CT	C	1125.11	PASS	AB=0.805;AC=21;AF=0.375;AN=56;BaseQRankSum=-1.155;DP=533;FS=1.534;HRun=16;HaplotypeScore=70.4839;InbreedingCoeff=0.2994;MQ=59.26;MQ0=17;MQRankSum=1.785;QD=3.96;ReadPosRankSum=4.516;VQSLOD=0.6621;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:17,10:28:27.26:179,0,27	0/0:3,0:3:3:0,3,25	0/0:37,0:12:2.27:0,2,88	0/1:36,0:10:10.39:10,0,24	0/1:15,4:20:9.02:9,0,167	0/1:8,5:15:28.63:61,0,29	1/1:5,7:13:19.67:113,20,0	0/0:20,0:25:32.31:0,32,219	0/0:16,2:18:5.79:0,6,255	1/1:3,7:11:21.71:123,22,0	1/1:8,5:14:6.48:97,6,0	0/1:5,3:12:3.82:64,0,4	0/0:3,0:11:11.67:0,12,78	0/1:14,1:15:0.59:1,0,64	1/1:6,10:17:14.35:146,14,0	0/1:6,1:9:3.78:4,0,95	0/0:27,1:27:19.83:0,20,254	1/1:9,10:21:21.57:119,22,0	0/0:22,0:34:49.11:0,49,362	0/0:10,1:14:9.91:0,10,134	0/0:7,0:13:8.52:0,9,43	0/0:4,0:8:14.73:0,15,99	1/1:7,11:18:41.12:249,41,0	0/1:11,8:18:1.19:76,0,1	0/0:8,1:16:0.74:0,1,76	0/1:28,3:31:50.33:50,0,250	0/0:6,0:21:23.19:0,23,146	0/0:15,0:15:7.24:0,7,53
chr10	37175090	.	CA	C	1768.27	PASS	AB=0.852;AC=27;AF=0.482;AN=56;BaseQRankSum=7.144;DP=558;FS=0.816;HRun=14;HaplotypeScore=70.7645;InbreedingCoeff=0.5596;MQ=78.56;MQ0=0;MQRankSum=0.574;QD=5.42;ReadPosRankSum=2.628;VQSLOD=2.4617;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:34,4:38:7.02:7,0,457	1/1:6,2:8:7.94:47,8,0	0/0:23,0:17:10.84:0,11,93	0/1:19,1:14:22.71:23,0,34	0/1:17,4:23:5.69:6,0,241	0/0:16,1:17:24.47:0,24,369	0/1:21,3:24:2.05:2,0,374	1/1:10,11:21:4.72:177,5,0	0/0:13,0:13:0.52:0,1,138	0/0:24,2:26:6.91:0,7,345	0/0:16,0:19:36.74:0,37,315	0/0:24,0:24:27.34:0,27,348	1/1:2,6:8:17.82:123,18,0	0/1:10,6:18:20.14:125,0,20	0/0:16,1:17:12.43:0,12,250	0/0:17,0:17:35.95:0,36,311	0/0:22,1:25:25.75:0,26,426	0/0:20,1:21:33.46:0,33,445	1/1:9,15:24:13.64:238,14,0	1/1:10,8:19:28.68:190,29,0	1/1:6,19:27:44.24:314,44,0	1/1:5,15:21:18.79:266,19,0	0/0:14,1:16:15.10:0,15,243	0/0:11,1:12:3.20:0,3,150	1/1:5,18:24:9.80:204,10,0	1/1:12,0:31:14.20:82,14,0	1/1:5,6:12:22.75:146,23,0	1/1:4,0:8:6.08:18,6,0
chr10	37176634	.	G	GTTTTTCTTTTTTTTTT	4153.23	PASS	AB=1.000;AC=24;AF=0.429;AN=56;BaseQRankSum=5.298;DP=510;FS=0.000;HRun=0;HaplotypeScore=207.1417;InbreedingCoeff=0.6127;MQ=71.79;MQ0=5;MQRankSum=-7.479;QD=16.68;ReadPosRankSum=-5.238;VQSLOD=1.1750;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:50.13:0,50,2731	1/1:2,2:8:3.01:201,3,0	0/1:40,0:17:10.31:10,0,17	0/1:40,0:20:24.55:25,0,82	0/0:20,0:20:32.47:0,32,932	0/0:14,0:13:33.58:0,34,1179	0/0:11,0:11:20.95:0,21,759	1/1:35,0:31:45.10:938,45,0	0/0:11,0:11:14.97:0,15,340	0/0:24,0:25:53.94:0,54,1286	0/0:15,0:15:27.01:0,27,888	0/1:5,0:5:4.80:5,0,17	1/1:5,0:5:3.01:121,3,0	1/1:7,0:6:3.01:92,3,0	0/0:15,0:15:33.08:0,33,1159	0/0:13,0:13:30.02:0,30,945	0/0:23,0:23:28.58:0,29,1202	0/0:18,0:18:38.52:0,39,1463	1/1:23,0:20:27.09:618,27,0	1/1:18,0:15:24.03:486,24,0	1/1:5,0:5:3.01:81,3,0	1/1:13,0:12:21.07:517,21,0	0/0:11,0:11:17.96:0,18,490	0/1:13,0:13:11.03:11,0,327	1/1:24,0:22:28.65:926,29,0	0/0:27,0:27:57.07:0,57,1518	1/1:13,0:12:5.68:122,6,0	0/0:14,0:14:26.95:0,27,614
chr10	37176640	.	CTTT	C	989.58	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=0.472;DP=506;FS=1.415;HRun=13;HaplotypeScore=92.9815;InbreedingCoeff=0.6700;MQ=70.24;MQ0=7;MQRankSum=2.008;QD=12.53;ReadPosRankSum=0.075;VQSLOD=1.7343;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:47:99:0,126,1929	0/0:7,0:7:3.01:0,3,43	1/1:40,1:16:2.34:62,2,0	0/0:38,0:20:21.32:0,21,232	0/0:22,0:23:54.15:0,54,918	0/0:13,0:13:36.10:0,36,656	0/0:10,0:10:27.07:0,27,469	0/0:33,0:28:53.28:0,53,582	0/0:10,0:10:18.06:0,18,331	0/0:23,0:25:69.21:0,69,1203	0/0:13,0:16:36.04:0,36,549	0/0:0,0:5:6.02:0,6,86	0/0:5,0:5:9.03:0,9,119	0/0:8,0:7:3.01:0,3,39	0/0:13,0:14:42.11:0,42,719	0/0:12,0:13:39.11:0,39,710	0/0:21,0:24:57.15:0,57,1000	0/0:19,0:21:55.59:0,56,832	0/0:17,0:14:22.81:0,23,263	0/0:16,0:13:23.65:0,24,226	0/0:3,0:3:5.95:0,6,58	0/0:11,0:10:23.99:0,24,323	0/0:3,0:10:24.05:0,24,315	0/0:6,0:14:0.46:0,0,322	0/0:24,0:22:32.60:0,33,379	1/1:7,19:26:60.15:729,60,0	0/0:15,0:14:13.29:0,13,112	1/1:2,9:11:27.07:328,27,0
chr10	37176766	.	G	GGT	1785.62	PASS	AB=0.803;AC=34;AF=0.654;AN=52;BaseQRankSum=1.894;DP=439;FS=1.642;HRun=0;HaplotypeScore=84.8881;InbreedingCoeff=0.1324;MQ=61.47;MQ0=9;MQRankSum=1.069;QD=5.67;ReadPosRankSum=-1.605;VQSLOD=2.8174;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:15,4:21:28.47:79,0,28	./.	0/0:29,0:14:5.73:0,6,53	0/0:48,0:22:3.48:0,3,32	0/1:22,0:22:24.43:24,0,170	0/1:7,4:10:18.22:166,0,18	0/1:13,7:21:99:164,0,107	1/1:23,0:19:18.01:182,18,0	0/0:10,0:10:6.01:0,6,67	0/1:14,0:16:2.41:96,0,2	0/1:7,3:12:20.82:105,0,21	1/1:13,0:13:2.98:22,3,0	1/1:3,0:3:2.80:13,3,0	1/1:9,0:9:5.98:46,6,0	0/1:5,4:10:2.07:124,0,2	0/0:10,0:10:15.04:0,15,166	0/0:21,0:22:26.83:0,27,268	0/1:14,6:20:42.46:227,0,42	1/1:13,0:12:6.85:51,7,0	1/1:8,0:8:11.99:114,12,0	1/1:15,1:19:5.54:38,6,0	./.	1/1:15,0:17:3:26,3,0	1/1:23,0:22:11.95:119,12,0	1/1:11,0:14:8.97:75,9,0	1/1:23,0:23:27.44:237,27,0	1/1:9,0:9:2.90:16,3,0	1/1:7,0:6:2.97:20,3,0
chr10	37178439	.	CAG	C	4836.83	PASS	AB=1.000;AC=33;AF=0.589;AN=56;BaseQRankSum=11.196;DP=265;FS=2.020;HRun=0;HaplotypeScore=37.2888;InbreedingCoeff=0.5657;MQ=67.86;MQ0=0;MQRankSum=-1.536;QD=25.32;ReadPosRankSum=2.145;VQSLOD=5.1883;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:13,0:13:13.30:117,0,13	1/1:0,7:7:15.05:229,15,0	0/0:4,0:4:9.02:0,9,122	0/0:2,0:2:0.47:0,0,1	0/0:15,0:15:44.99:0,45,759	0/1:6,0:6:6.78:55,0,7	1/1:8,0:8:19.80:99,20,0	1/1:0,24:24:72.19:1016,72,0	0/0:2,0:2:6:0,6,82	0/1:8,0:8:6.65:54,0,7	1/1:12,0:12:9.38:138,9,0	0/0:9,0:9:27.05:0,27,422	1/1:0,7:7:15.05:229,15,0	1/1:0,5:5:6.02:92,6,0	0/1:6,0:6:32.50:44,0,32	0/0:8,0:8:24.08:0,24,455	0/0:24,0:24:72.21:0,72,1321	0/1:16,0:16:5.85:135,0,6	1/1:0,8:8:21.07:321,21,0	1/1:1,10:11:27.09:413,27,0	1/1:0,4:4:12.04:184,12,0	1/1:0,7:7:9.03:138,9,0	0/0:7,0:7:18.03:0,18,282	0/0:3,0:3:9.01:0,9,140	1/1:0,9:9:21.07:321,21,0	1/1:2,16:18:50.81:703,51,0	1/1:1,9:10:18.06:275,18,0	1/1:0,12:12:18.06:275,18,0
chr10	37179860	.	T	TA	5449.02	PASS	AB=1.000;AC=36;AF=0.643;AN=56;BaseQRankSum=-5.198;DP=550;FS=0.867;HRun=11;HaplotypeScore=67.0457;InbreedingCoeff=0.8850;MQ=59.24;MQ0=3;MQRankSum=-2.936;QD=14.45;ReadPosRankSum=-0.220;VQSLOD=5.0633;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,26:37:48.10:487,48,0	1/1:4,4:8:12.02:122,12,0	0/1:15,0:8:6.36:6,0,35	0/0:10,0:9:20.18:0,20,136	0/0:22,0:23:34.80:0,35,255	1/1:3,21:24:48.09:481,48,0	1/1:2,7:9:9.02:91,9,0	1/1:12,23:36:68.81:668,69,0	0/0:19,0:19:47.78:0,48,368	1/1:11,16:26:27.84:456,28,0	1/1:12,10:21:39.08:396,39,0	0/0:12,0:12:20.84:0,21,156	1/1:6,11:17:18.04:183,18,0	1/1:9,7:15:30.06:304,30,0	1/1:3,15:19:38.81:365,39,0	0/0:10,0:10:26.86:0,27,203	0/0:33,0:33:77.60:0,78,595	1/1:6,13:18:30.05:299,30,0	1/1:6,5:9:15.03:152,15,0	1/1:8,22:29:30.88:495,31,0	1/1:1,13:14:18.04:183,18,0	1/1:6,10:17:12.62:283,13,0	0/0:22,0:23:37.82:0,38,284	0/0:16,0:16:35.81:0,36,274	0/0:27,0:26:65.67:0,66,506	1/1:15,1:23:36.33:192,36,0	1/1:12,16:27:14.84:286,15,0	0/1:4,0:4:0:0,0,0
chr10	37179908	.	TTG	T	1085.34	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=7.257;DP=692;FS=8.329;HRun=0;HaplotypeScore=167.8636;InbreedingCoeff=0.0630;MQ=48.73;MQ0=8;MQRankSum=-6.056;QD=4.19;ReadPosRankSum=-5.671;VQSLOD=0.1950;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:84.28:0,84,1445	0/1:7,0:7:11.19:11,0,91	0/0:50,0:22:44.04:0,44,776	0/0:33,0:19:47.18:0,47,724	0/0:24,0:24:66.23:0,66,1134	0/0:19,0:19:33.11:0,33,571	0/0:22,0:22:56.22:0,56,941	0/1:43,0:41:66.16:66,0,1266	0/0:23,0:23:69.24:0,69,1195	0/0:33,0:33:93.31:0,93,1583	0/0:19,0:19:45.02:0,45,752	0/0:16,0:16:42.14:0,42,719	0/1:23,0:23:99:138,0,425	0/1:27,0:26:99:195,0,497	0/0:27,0:27:78.24:0,78,1288	0/0:19,0:19:51.16:0,51,855	0/0:38,0:38:99:0,102,1711	0/0:11,0:11:30.08:0,30,489	0/1:18,0:18:63.07:63,0,456	0/1:33,0:33:99:127,0,611	0/1:32,0:31:30.70:31,0,207	0/1:31,0:31:16.98:17,0,894	0/0:18,0:18:48.15:0,48,798	0/0:18,0:17:48.12:0,48,799	0/1:26,0:25:20.39:20,0,717	1/1:4,12:16:36.12:479,36,0	0/0:27,0:25:0.59:0,1,853	1/1:0,3:3:8.99:100,9,0
chr10	37179916	.	GTA	G	2822.47	PASS	AB=0.825;AC=13;AF=0.232;AN=56;BaseQRankSum=6.037;DP=727;FS=5.420;HRun=0;HaplotypeScore=164.2486;InbreedingCoeff=-0.1319;MQ=48.82;MQ0=9;MQRankSum=-5.155;QD=9.38;ReadPosRankSum=-6.729;VQSLOD=1.7595;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:87.27:0,87,1593	0/1:4,1:5:45.45:45,0,55	0/0:53,0:20:48.93:0,49,857	0/0:35,0:17:37.37:0,37,634	0/0:23,0:23:66.23:0,66,1234	0/0:18,0:18:42.11:0,42,713	0/0:27,0:27:68.21:0,68,1114	0/1:36,10:44:99:356,0,1132	0/0:26,0:26:60.48:0,60,1342	0/0:34,0:34:99:0,99,1778	0/0:19,0:19:54:0,54,882	0/0:16,0:16:42.14:0,42,782	0/1:18,8:26:99:397,0,244	0/1:15,14:28:99:394,0,317	0/0:29,0:29:84.26:0,84,1486	0/0:21,0:22:57.15:0,57,971	0/0:36,0:36:99:0,102,1861	0/0:14,0:14:39:0,39,579	0/1:15,5:19:99:261,0,424	0/1:23,10:33:99:439,0,459	0/1:29,8:36:99:291,0,156	0/1:30,4:34:99:215,0,638	0/0:17,0:17:48.15:0,48,850	0/0:19,0:18:51.14:0,51,890	0/1:17,6:23:99:155,0,576	0/1:16,0:16:53.26:199,0,53	0/1:26,3:27:99:183,0,652	1/1:3,0:3:6.42:43,6,0
chr10	37179922	.	TTG	T	5240.09	PASS	AB=0.738;AC=16;AF=0.286;AN=56;BaseQRankSum=13.067;DP=760;FS=13.580;HRun=0;HaplotypeScore=159.3536;InbreedingCoeff=-0.0434;MQ=48.98;MQ0=10;MQRankSum=-13.106;QD=12.87;ReadPosRankSum=2.220;VQSLOD=4.1058;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:96.32:0,96,1608	0/1:3,3:6:98.79:99,0,132	0/1:49,5:20:13.11:13,0,528	0/1:35,2:16:1.66:2,0,471	0/0:25,0:25:69.24:0,69,1160	0/0:18,0:18:42.14:0,42,714	0/0:29,0:29:71.27:0,71,1176	0/1:29,22:49:99:833,0,605	0/0:28,0:28:75.23:0,75,1246	0/0:34,0:34:93.28:0,93,1505	0/0:24,0:24:54.18:0,54,906	0/0:16,0:16:45.15:0,45,776	0/1:12,14:26:99:491,0,359	0/1:19,12:30:99:395,0,324	0/0:30,0:30:84.29:0,84,1410	0/0:19,1:20:18.13:0,18,848	0/0:34,0:34:96.33:0,96,1633	0/0:14,0:14:36.08:0,36,570	0/1:17,5:20:99:239,0,246	0/1:17,15:32:99:508,0,457	0/1:35,5:39:50.91:51,0,886	0/1:12,22:34:99:734,0,194	0/0:19,0:19:57.19:0,57,958	0/0:23,0:22:60.20:0,60,998	0/1:10,13:23:99:472,0,220	1/1:1,17:18:54.18:702,54,0	0/1:12,17:29:99:584,0,333	1/1:1,3:4:9.03:117,9,0
chr10	37179936	.	TTG	T	3020.43	PASS	AB=0.725;AC=9;AF=0.161;AN=56;BaseQRankSum=12.935;DP=802;FS=1.313;HRun=0;HaplotypeScore=168.6721;InbreedingCoeff=-0.1940;MQ=49.02;MQ0=10;MQRankSum=-12.408;QD=11.36;ReadPosRankSum=2.241;VQSLOD=3.7334;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:81.27:0,81,1355	0/1:4,3:7:95.77:96,0,174	0/0:55,0:18:22.89:0,23,373	0/0:34,1:14:22.31:0,22,312	0/0:25,0:25:66.23:0,66,1122	0/0:16,0:16:36.12:0,36,612	0/0:32,0:32:71.88:0,72,1216	0/1:46,13:54:99:290,0,1250	0/0:28,0:28:75.24:0,75,1249	0/0:34,0:34:77.79:0,78,1321	0/0:23,0:23:60.21:0,60,1021	0/0:20,0:20:51.16:0,51,852	0/1:16,11:27:99:403,0,585	0/1:24,10:33:99:299,0,796	0/0:36,0:36:99:0,105,1766	0/0:19,1:20:21.18:0,21,913	0/0:37,1:38:66.33:0,66,1648	0/0:16,0:16:34.67:0,35,565	0/1:19,6:22:99:222,0,628	0/1:18,12:30:99:419,0,729	0/0:41,5:45:16.51:0,17,1378	0/1:15,18:33:99:594,0,472	0/0:21,0:21:48.16:0,48,816	0/0:26,0:25:66.19:0,66,1055	0/1:13,9:22:99:299,0,357	0/0:23,0:23:69.24:0,69,1163	0/1:13,16:29:99:539,0,519	0/0:5,0:5:12.04:0,12,201
chr10	37180766	.	GC	G	1214.88	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.801;DP=678;FS=1.373;HRun=1;HaplotypeScore=65.4270;InbreedingCoeff=0.9928;MQ=89.96;MQ0=0;MQRankSum=-2.740;QD=34.71;ReadPosRankSum=1.340;VQSLOD=3.5748;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,117,1870	0/0:6,0:6:18.06:0,18,288	0/0:28,0:29:80.12:0,80,1247	0/0:24,0:24:71.24:0,71,1071	0/0:24,0:24:72.23:0,72,1124	0/0:14,0:14:42.14:0,42,672	0/0:35,0:35:99:0,105,1679	0/0:43,0:43:99:0,129,2043	0/0:22,0:22:66.23:0,66,1055	0/0:27,0:27:81.28:0,81,1296	0/0:22,0:22:66.21:0,66,1032	0/0:16,0:16:48.13:0,48,719	0/0:27,0:27:81.28:0,81,1291	0/0:18,0:18:54.18:0,54,863	0/0:25,0:25:75.23:0,75,1153	0/0:24,0:24:72.25:0,72,1151	0/0:26,0:26:78.25:0,78,1220	0/0:26,0:26:78.27:0,78,1242	0/0:25,0:25:72.25:0,72,1152	0/0:21,0:21:63.21:0,63,1004	0/0:48,0:48:99:0,144,2272	0/0:21,0:21:63.21:0,63,1007	0/0:15,0:15:42.14:0,42,671	0/0:26,0:26:78.27:0,78,1247	0/0:18,0:18:54.18:0,54,863	1/1:2,20:22:19.56:790,20,0	0/0:22,0:22:66.20:0,66,1009	1/1:0,13:13:39.13:545,39,0
chr10	37181169	.	ATG	A	2279.87	PASS	AB=0.929;AC=15;AF=0.278;AN=54;BaseQRankSum=-0.827;DP=664;FS=3.681;HRun=0;HaplotypeScore=100.4442;InbreedingCoeff=0.7504;MQ=57.02;MQ0=13;MQRankSum=2.028;QD=11.75;ReadPosRankSum=1.683;VQSLOD=3.3136;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:20,16:39:47.38:479,47,0	0/0:4,0:3:3:0,3,29	./.	0/0:47,1:16:9.01:0,9,104	0/0:19,0:19:36.12:0,36,544	1/1:11,10:20:18.05:202,18,0	1/1:14,15:30:35.77:364,36,0	0/0:29,0:29:22.25:0,22,261	0/0:15,1:16:2.49:0,2,463	1/1:18,12:30:36.10:402,36,0	1/1:2,5:7:12.03:135,12,0	0/1:6,1:13:3.63:4,0,237	0/0:10,0:15:17.79:0,18,159	0/0:7,0:17:17.96:0,18,149	1/1:8,11:19:29.92:317,30,0	0/0:19,0:19:39.13:0,39,587	0/0:32,1:33:4.56:0,5,509	1/1:11,22:33:3.60:560,4,0	0/0:9,0:14:17.55:0,18,183	0/0:11,0:18:14.99:0,15,130	0/0:20,1:22:2.36:0,2,302	0/0:6,0:19:22.49:0,22,189	0/0:12,0:17:15:0,15,149	0/0:27,0:44:54.05:0,54,565	0/0:10,0:16:11.97:0,12,104	0/0:34,0:33:30.10:0,30,456	0/0:22,0:29:50.95:0,51,431	0/0:20,1:21:8.48:0,8,523
chr10	37182481	.	C	CATT	2254.91	PASS	AB=0.545;AC=3;AF=0.054;AN=56;BaseQRankSum=-9.195;DP=495;FS=0.630;HRun=0;HaplotypeScore=63.9142;InbreedingCoeff=0.6064;MQ=68.95;MQ0=0;MQRankSum=-0.335;QD=46.98;ReadPosRankSum=2.435;VQSLOD=5.2993;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:81.28:0,81,1267	0/0:8,0:8:24.08:0,24,375	0/0:4,0:4:9.03:0,9,141	0/0:8,0:8:17.65:0,18,240	0/0:32,0:32:90.31:0,90,1404	0/0:21,0:21:51.17:0,51,796	0/0:14,0:14:42.14:0,42,657	0/0:25,0:25:63.21:0,63,963	0/0:15,0:15:39.12:0,39,586	0/0:26,0:26:72.25:0,72,1126	0/0:22,0:22:54.18:0,54,845	0/0:14,0:14:33.11:0,33,516	0/0:9,0:9:27.09:0,27,412	0/0:9,0:9:27.09:0,27,421	0/0:15,0:15:36.10:0,36,536	0/0:10,0:10:30.10:0,30,468	0/0:33,0:32:87.30:0,87,1357	0/0:15,0:15:39.10:0,39,585	0/0:18,0:18:48.14:0,48,705	0/0:34,0:34:99:0,102,1567	0/0:15,0:15:36.12:0,36,563	0/0:9,0:9:18.06:0,18,282	0/0:12,0:12:33.11:0,33,516	0/0:7,0:7:15.05:0,15,235	0/0:20,0:20:60.20:0,60,939	0/1:4,20:24:27.69:1192,0,28	0/0:20,0:20:48.16:0,48,747	1/1:3,21:24:54.19:1169,54,0
chr10	37182817	.	T	TTGTATGTATGTA	3689.74	PASS	AB=1.000;AC=13;AF=0.250;AN=52;BaseQRankSum=2.893;DP=651;FS=5.953;HRun=0;HaplotypeScore=220.6791;InbreedingCoeff=0.7936;MQ=72.01;MQ0=5;MQRankSum=-5.648;QD=19.63;ReadPosRankSum=-1.833;VQSLOD=1.8049;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:34,2:37:6.02:347,6,0	0/0:4,0:4:6.02:0,6,149	./.	./.	0/0:38,0:38:72.16:0,72,2230	1/1:23,1:25:24.06:865,24,0	1/1:22,0:22:6.02:210,6,0	0/0:36,0:34:9:0,9,81	0/0:23,0:23:24.05:0,24,655	1/1:27,2:30:24.08:1043,24,0	1/1:25,2:32:11.61:632,12,0	0/0:19,0:19:18.06:0,18,612	0/0:9,0:9:12.04:0,12,354	0/0:14,0:19:10.78:0,11,120	1/1:13,0:20:18.53:487,19,0	0/0:21,0:21:33.09:0,33,893	0/0:35,0:35:36.58:0,37,1087	0/1:22,0:21:3.04:107,0,3	0/0:17,0:14:9:0,9,225	0/0:27,0:27:45.12:0,45,1188	0/0:25,0:25:36.11:0,36,990	0/0:14,0:15:24.08:0,24,745	0/0:23,0:23:36.09:0,36,1007	0/0:23,0:23:18.06:0,18,602	0/0:14,0:14:24.05:0,24,636	0/0:30,0:32:39.58:0,40,951	0/0:26,0:26:33.09:0,33,863	0/0:10,0:10:2.99:0,3,23
chr10	37182926	.	GTGGTT	G	1693.67	PASS	AB=0.647;AC=3;AF=0.054;AN=56;BaseQRankSum=5.188;DP=663;FS=1.799;HRun=0;HaplotypeScore=157.4521;InbreedingCoeff=0.6428;MQ=75.60;MQ0=3;MQRankSum=-0.184;QD=33.21;ReadPosRankSum=-0.912;VQSLOD=3.4347;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:58:99:0,162,4173	0/0:8,0:8:23.13:0,23,241	0/0:32,0:21:33.28:0,33,552	0/0:30,0:18:34.78:0,35,491	0/0:32,0:32:84.22:0,84,2041	0/0:11,0:11:30.10:0,30,820	0/0:17,0:17:42.14:0,42,1066	0/0:29,0:28:58.94:0,59,671	0/0:20,0:20:57.18:0,57,1349	0/0:31,0:31:84.27:0,84,2185	0/0:27,0:27:78.08:0,78,1888	0/0:14,0:14:36.12:0,36,911	0/0:14,0:14:30.42:0,30,372	0/0:14,0:14:25.52:0,26,411	0/0:31,0:31:93.27:0,93,2238	0/0:20,0:20:60.17:0,60,1350	0/0:32,0:32:93.27:0,93,2494	0/0:26,0:26:75.20:0,75,1900	0/0:29,0:27:35.23:0,35,578	0/0:23,0:23:59.22:0,59,741	0/0:13,0:13:20.87:0,21,354	0/0:15,0:15:27.71:0,28,296	0/0:20,0:20:57.18:0,57,1559	0/0:22,0:22:63.63:0,64,1707	0/0:20,0:20:44.29:0,44,657	0/1:15,18:33:50.48:1206,0,50	0/0:23,0:23:49.26:0,49,643	1/1:18,0:18:45.09:594,45,0
chr10	37182927	.	TG	T	797.31	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.672;DP=661;FS=3.271;HRun=2;HaplotypeScore=112.2120;InbreedingCoeff=0.9172;MQ=72.87;MQ0=4;MQRankSum=-0.814;QD=15.63;ReadPosRankSum=0.236;VQSLOD=3.5684;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:56:99:0,156,2229	0/0:8,0:8:16.99:0,17,130	0/0:30,0:18:34.32:0,34,480	0/0:29,0:17:30.80:0,31,394	0/0:30,0:30:84.22:0,84,1203	0/0:10,0:10:30.10:0,30,434	0/0:17,0:17:45.13:0,45,651	0/0:32,0:31:64.33:0,64,463	0/0:21,0:21:60.18:0,60,856	0/0:33,0:33:87.27:0,87,1261	0/0:28,0:27:72.21:0,72,1051	0/0:13,0:13:36.12:0,36,525	0/0:13,0:13:27.04:0,27,214	0/0:13,0:13:26.82:0,27,202	0/0:31,0:31:93.27:0,93,1329	0/0:20,0:20:60.17:0,60,849	0/0:32,0:32:93.27:0,93,1336	0/0:26,0:26:72.24:0,72,1063	0/0:29,2:29:30.61:0,31,385	0/0:22,0:22:28.23:0,28,350	0/0:13,0:13:30.83:0,31,274	0/0:16,0:16:39.92:0,40,288	0/0:20,0:20:57.18:0,57,831	0/0:23,0:22:60.20:0,60,898	0/0:19,1:20:29.60:0,30,301	1/1:21,11:33:4.59:578,5,0	0/0:23,0:23:25.68:0,26,251	1/1:12,6:18:38.47:330,38,0
chr10	37182930	.	TTTG	T	2056.91	PASS	AB=0.985;AC=15;AF=0.268;AN=56;BaseQRankSum=11.194;DP=669;FS=5.728;HRun=0;HaplotypeScore=130.8340;InbreedingCoeff=0.2263;MQ=69.35;MQ0=6;MQRankSum=-0.740;QD=8.36;ReadPosRankSum=-2.532;VQSLOD=2.5804;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,153,2582	0/1:9,0:9:3.92:41,0,4	0/0:28,0:15:3.42:0,3,268	0/0:28,0:16:24.22:0,24,279	0/0:29,0:29:74.96:0,75,1172	0/0:12,0:12:36.07:0,36,566	0/0:17,0:17:23.08:0,23,610	0/1:29,0:28:0.91:194,0,1	0/0:23,0:23:59.86:0,60,826	0/0:35,0:34:90.18:0,90,1433	0/0:29,0:28:76.54:0,77,1169	0/0:13,0:13:36.08:0,36,564	0/1:13,1:14:21.53:73,0,22	0/1:13,1:14:18.22:107,0,18	0/0:31,0:30:84.13:0,84,1262	0/0:21,0:21:56.54:0,57,824	0/0:30,0:30:87.21:0,87,1485	0/0:27,0:27:79.67:0,80,1302	0/1:29,0:27:32.68:115,0,33	0/1:25,0:25:87.88:88,0,99	0/1:13,0:13:26.58:96,0,27	1/1:16,0:16:9.83:154,10,0	0/0:20,0:20:57.18:0,57,978	0/0:25,0:24:60.53:0,61,999	0/1:20,0:20:44.20:65,0,44	1/1:24,9:33:7.97:801,8,0	0/1:25,0:25:57.27:59,0,57	1/1:14,5:19:40.98:434,41,0
chr10	37182931	.	TTG	T	3831.61	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=9.957;DP=659;FS=0.320;HRun=0;HaplotypeScore=111.8450;InbreedingCoeff=0.9848;MQ=69.41;MQ0=6;MQRankSum=-0.993;QD=15.83;ReadPosRankSum=-4.328;VQSLOD=2.2858;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,152,2053	1/1:9,0:9:21.11:143,21,0	0/0:28,0:15:15.10:0,15,221	0/0:29,0:16:23.53:0,24,244	0/0:29,0:29:74.25:0,74,934	0/0:12,0:12:35.71:0,36,439	0/0:17,0:17:23.07:0,23,509	1/1:25,2:26:44.46:463,44,0	0/0:23,0:23:51.40:0,51,650	0/0:34,0:33:88.74:0,89,1134	0/0:29,0:28:78.69:0,79,928	0/0:13,0:13:35.72:0,36,448	1/1:12,1:13:15.42:179,15,0	1/1:14,0:14:19.32:218,19,0	0/0:29,0:28:83.88:0,84,1028	0/0:20,0:20:55.48:0,55,635	0/0:29,0:29:87.20:0,87,1181	0/0:27,0:27:80.19:0,80,1036	1/1:28,1:27:44.05:374,44,0	1/1:25,0:25:17.58:339,18,0	1/1:13,0:13:9.85:160,10,0	1/1:16,0:16:21.59:261,22,0	0/0:19,0:19:55.98:0,56,736	0/0:25,0:24:59.97:0,60,785	1/1:18,1:19:33.24:296,33,0	1/1:31,3:34:38.85:749,39,0	1/1:23,1:24:26.52:275,27,0	1/1:18,1:19:38.52:375,39,0
chr10	37182932	.	TG	T	5889.15	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=7.684;DP=665;FS=2.596;HRun=1;HaplotypeScore=97.2247;InbreedingCoeff=0.9857;MQ=68.37;MQ0=6;MQRankSum=-3.471;QD=24.04;ReadPosRankSum=-4.456;VQSLOD=3.5588;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:56:99:0,130,1528	1/1:4,5:9:26.06:270,26,0	0/0:27,0:14:7.05:0,7,179	0/0:29,0:16:22.90:0,23,220	0/0:30,0:30:68.41:0,68,696	0/0:12,0:12:22.09:0,22,306	0/0:17,0:17:23.05:0,23,409	1/1:6,21:26:70.13:690,70,0	0/0:22,0:22:34.68:0,35,485	0/0:33,1:33:70.49:0,70,839	0/0:30,0:29:61.69:0,62,693	0/0:12,1:13:20.24:0,20,306	1/1:10,3:13:29.27:312,29,0	1/1:8,5:13:36.72:394,37,0	0/0:29,0:28:79.65:0,80,792	0/0:21,0:21:49.64:0,50,461	0/0:30,0:30:86.87:0,87,889	0/0:27,0:27:72.45:0,72,744	1/1:17,11:26:68.44:744,68,0	1/1:17,9:26:64.30:631,64,0	1/1:9,5:14:29.38:264,29,0	1/1:12,4:16:33.71:359,34,0	0/0:19,0:19:55.75:0,56,545	0/0:24,0:23:54.79:0,55,591	1/1:13,6:19:54.81:592,55,0	1/1:35,0:35:63.12:702,63,0	1/1:15,10:25:55.64:573,56,0	1/1:20,0:20:44.24:359,44,0
chr10	37184202	.	T	TTGTG	7925.27	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=-10.283;DP=652;FS=7.611;HRun=0;HaplotypeScore=123.8887;InbreedingCoeff=0.8946;MQ=60.72;MQ0=0;MQRankSum=-0.269;QD=31.33;ReadPosRankSum=-0.939;VQSLOD=4.3246;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:33:72.09:0,72,965	1/1:0,3:4:8.77:159,9,0	0/0:32,0:24:36.10:0,36,538	0/1:23,0:15:12.36:12,0,201	0/0:23,0:23:45.08:0,45,698	0/0:31,0:32:59.25:0,59,1098	0/0:26,0:25:47.75:0,48,690	1/1:17,17:38:74.66:1110,75,0	0/0:25,0:25:54.15:0,54,841	0/0:25,0:27:60.18:0,60,924	0/0:12,0:12:20.94:0,21,312	0/0:20,0:20:54.18:0,54,892	1/1:5,13:19:32.85:744,33,0	1/1:5,8:15:26.98:605,27,0	0/0:32,0:33:87.28:0,87,1390	0/0:19,0:19:48.15:0,48,765	0/0:20,0:22:48.14:0,48,745	0/0:26,0:27:69.23:0,69,1109	1/1:6,15:24:50.58:829,51,0	1/1:2,9:12:9.03:220,9,0	1/1:15,49:69:99:2729,114,0	1/1:4,10:19:23.35:466,23,0	0/0:12,0:12:17.89:0,18,261	0/0:24,0:24:51.13:0,51,786	1/1:1,4:5:9.03:220,9,0	0/0:4,0:24:54.06:0,54,503	1/1:2,19:24:38.35:830,38,0	0/0:4,0:8:12.01:0,12,112
chr10	37184682	.	ATT	A	3562.51	PASS	AB=0.615;AC=21;AF=0.375;AN=56;BaseQRankSum=4.679;DP=434;FS=17.661;HRun=11;HaplotypeScore=68.4718;InbreedingCoeff=0.7298;MQ=76.77;MQ0=0;MQRankSum=0.425;QD=23.44;ReadPosRankSum=4.111;VQSLOD=1.4958;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:28:71.68:0,72,1021	1/1:1,8:9:24.03:255,24,0	0/0:35,0:19:6.77:0,7,191	0/0:23,0:20:9.68:0,10,365	0/0:18,0:18:45.13:0,45,652	0/0:12,0:12:33.06:0,33,461	0/0:7,0:7:12.04:0,12,178	1/1:5,9:13:24:255,24,0	0/0:14,0:15:36.12:0,36,542	0/0:11,0:12:33.08:0,33,434	0/0:14,0:14:39.13:0,39,581	0/0:16,0:16:36.12:0,36,552	0/1:3,8:11:15.65:211,0,16	1/1:1,12:14:12.43:354,12,0	0/0:13,0:13:27.09:0,27,416	0/0:14,0:14:33.07:0,33,481	0/0:27,0:32:83.23:0,83,1162	0/0:12,0:14:35.09:0,35,479	1/1:2,13:15:29.61:396,30,0	0/1:3,6:9:18.93:142,0,19	1/1:0,6:8:23.53:215,24,0	1/1:0,10:10:30.08:319,30,0	0/0:16,0:16:33.95:0,34,472	0/0:7,0:11:31.56:0,32,377	0/1:6,6:12:22.67:136,0,23	1/1:1,7:8:21.05:224,21,0	1/1:5,21:26:6.39:576,6,0	1/1:0,15:15:45.11:479,45,0
chr10	37185525	.	CCTCTCT	C	940.94	PASS	AB=0.820;AC=18;AF=0.333;AN=54;BaseQRankSum=0.208;DP=616;FS=17.124;HRun=0;HaplotypeScore=141.6312;InbreedingCoeff=0.5878;MQ=72.58;MQ0=14;MQRankSum=-4.107;QD=5.20;ReadPosRankSum=1.601;VQSLOD=1.8236;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:28:35.48:0,35,796	1/1:8,1:12:5.82:103,6,0	1/1:36,0:18:2.74:12,3,0	0/0:52,0:25:2.04:0,2,6	0/0:19,0:22:9.49:0,9,168	0/0:24,0:25:16.75:0,17,264	0/0:25,0:28:24.52:0,25,523	0/0:30,0:30:6.49:0,6,83	0/0:20,0:23:6.02:0,6,152	0/0:33,0:32:45.15:0,45,957	0/0:13,0:14:12.51:0,13,242	0/0:21,0:25:21.02:0,21,390	1/1:7,2:9:2.75:61,3,0	0/1:10,1:11:14.86:110,0,15	0/0:24,0:25:12.51:0,13,279	0/0:14,0:17:15.52:0,16,346	0/0:16,0:17:25.64:0,26,433	0/0:15,0:19:15.01:0,15,296	1/1:18,2:18:6.62:160,7,0	1/1:7,2:9:7.26:126,7,0	1/1:22,11:34:4.36:64,4,0	1/1:16,0:18:11.83:162,12,0	0/0:10,0:10:3.95:0,4,64	0/0:19,0:21:9.33:0,9,218	1/1:10,0:10:3.01:61,3,0	0/0:24,0:31:53.20:0,53,1094	0/1:13,6:21:3.42:249,0,3	./.
chr10	37187538	.	G	GAC	1599.36	PASS	AB=0.700;AC=6;AF=0.107;AN=56;BaseQRankSum=-1.529;DP=778;FS=8.082;HRun=0;HaplotypeScore=107.7509;InbreedingCoeff=0.2217;MQ=56.77;MQ0=11;MQRankSum=0.278;QD=12.03;ReadPosRankSum=0.475;VQSLOD=2.7401;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:40:48.29:0,48,683	0/0:10,0:11:29.91:0,30,324	0/0:28,0:10:14.96:0,15,131	0/0:20,0:6:3.72:0,4,71	0/0:26,0:26:45.90:0,46,619	0/0:26,0:27:48.13:0,48,560	0/0:30,0:31:63.02:0,63,728	0/0:37,0:38:75.03:0,75,840	0/0:24,0:26:59.92:0,60,646	0/0:44,0:44:99:0,99,1137	0/0:23,0:25:44.96:0,45,502	0/1:8,17:25:26.36:576,0,26	0/0:20,0:20:51.16:0,51,607	0/0:17,0:17:41.86:0,42,476	0/0:26,0:26:69.20:0,69,809	0/0:24,0:25:65.60:0,66,725	0/0:32,0:33:82.62:0,83,935	0/0:33,0:35:57.82:0,58,623	0/0:24,0:22:50.75:0,51,539	0/0:23,0:23:60.14:0,60,678	0/0:37,0:41:73.54:0,74,793	0/0:20,0:19:48.14:0,48,568	0/1:6,14:20:47.15:263,0,47	0/1:13,20:34:17.33:710,0,17	0/0:22,0:22:51.14:0,51,593	0/1:42,0:42:27.28:108,0,27	0/0:38,0:42:84.07:0,84,966	1/1:12,0:12:13.06:71,13,0
chr10	37187559	.	T	TCA	1028.04	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.631;DP=791;FS=11.049;HRun=0;HaplotypeScore=112.2694;InbreedingCoeff=0.9835;MQ=60.30;MQ0=12;MQRankSum=-5.369;QD=20.56;ReadPosRankSum=0.135;VQSLOD=3.3043;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:84.27:0,84,1046	0/0:13,0:13:30.10:0,30,377	0/0:40,0:17:45.12:0,45,542	0/0:31,0:17:34.88:0,35,406	0/0:27,0:27:53.63:0,54,632	0/0:24,0:24:66.20:0,66,817	0/0:27,0:27:60.19:0,60,755	0/0:29,0:29:57.17:0,57,703	0/0:33,0:33:78.13:0,78,932	0/0:42,0:42:99:0,108,1321	0/0:20,0:20:45.14:0,45,566	0/0:21,0:21:21.15:0,21,206	0/0:23,0:23:60.19:0,60,755	0/0:19,0:19:51.15:0,51,629	0/0:28,0:28:69.20:0,69,843	0/0:25,0:25:60.18:0,60,744	0/0:33,0:31:81.26:0,81,1016	0/0:34,0:34:52.09:0,52,656	0/0:28,0:25:54.10:0,54,648	0/0:27,0:27:60.13:0,60,701	0/0:45,0:45:99:0,99,1216	0/0:20,0:19:48.15:0,48,600	0/0:23,0:23:17.89:0,18,245	0/0:29,0:29:25.27:0,25,263	0/0:27,0:27:63.19:0,63,781	1/1:30,12:42:25.34:910,25,0	0/0:36,0:36:81.23:0,81,990	1/1:1,7:8:15.05:236,15,0
chr10	37188224	.	G	GT	277.70	PASS	AB=0.649;AC=3;AF=0.054;AN=56;BaseQRankSum=7.513;DP=595;FS=2.814;HRun=1;HaplotypeScore=84.1284;InbreedingCoeff=0.6052;MQ=65.58;MQ0=2;MQRankSum=-4.877;QD=9.58;ReadPosRankSum=-0.582;VQSLOD=1.0194;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:78.16:0,78,1019	0/0:4,0:4:12.04:0,12,168	0/0:27,0:24:28.43:0,28,617	0/0:24,0:17:41.59:0,42,436	0/0:13,0:13:39.13:0,39,525	0/0:15,0:14:44.16:0,44,561	0/0:26,0:26:75.23:0,75,984	0/0:26,0:25:66.21:0,66,872	0/0:29,0:29:84.25:0,84,1135	0/0:22,0:22:60.16:0,60,766	0/0:16,0:16:45.10:0,45,556	0/0:23,0:23:63.17:0,63,852	0/0:15,0:15:39.02:0,39,480	0/0:26,0:26:71.08:0,71,893	0/0:24,0:24:69.23:0,69,952	0/0:27,0:27:75.15:0,75,975	0/0:22,0:22:63.16:0,63,828	0/0:14,0:14:39.13:0,39,544	0/0:13,0:13:39.12:0,39,515	0/0:36,0:36:84.28:0,84,1160	0/0:35,0:35:99:0,99,1281	0/0:26,0:26:71.99:0,72,993	0/0:18,0:18:47.96:0,48,633	0/0:16,0:16:45.02:0,45,617	0/0:19,0:19:39.62:0,40,583	0/1:11,12:24:39.55:290,0,40	0/0:22,0:22:60.14:0,60,777	1/1:2,3:5:11.92:87,12,0
chr10	37188225	.	G	GTGTGT	1095.51	PASS	AB=0.641;AC=2;AF=0.036;AN=56;BaseQRankSum=6.489;DP=588;FS=4.156;HRun=0;HaplotypeScore=127.1069;InbreedingCoeff=0.2974;MQ=64.12;MQ0=2;MQRankSum=-5.629;QD=39.13;ReadPosRankSum=-0.090;VQSLOD=3.6891;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:78.20:0,78,1632	0/0:4,0:4:12.04:0,12,279	0/0:25,0:22:45.68:0,46,916	0/0:23,0:16:41.98:0,42,705	0/0:13,0:13:39.13:0,39,885	0/0:15,0:14:45.13:0,45,959	0/0:27,0:27:75.18:0,75,1515	0/0:26,0:25:75.20:0,75,1514	0/0:30,0:30:84.74:0,85,1844	0/0:22,0:22:63.19:0,63,1309	0/0:16,0:16:44.64:0,45,894	0/0:24,0:24:63.21:0,63,1411	0/0:15,0:15:26.66:0,27,780	0/0:26,0:26:74.71:0,75,1591	0/0:23,0:23:69.24:0,69,1593	0/0:25,0:25:72.22:0,72,1591	0/0:21,0:21:63.15:0,63,1316	0/0:14,0:14:41.63:0,42,917	0/0:13,0:13:38.90:0,39,794	0/0:35,0:35:90.19:0,90,1953	0/0:36,0:36:99:0,102,2100	0/0:26,0:26:71.89:0,72,1615	0/0:17,0:17:47.95:0,48,1011	0/0:16,0:16:44.74:0,45,1020	0/0:19,0:19:50.14:0,50,987	0/1:11,11:23:99:984,0,105	0/0:22,0:22:59.76:0,60,1287	0/1:2,3:5:1.67:201,0,2
chr10	37188278	.	TACACACACACACAC	T	4731.81	PASS	AB=0.805;AC=21;AF=0.420;AN=50;BaseQRankSum=7.003;DP=513;FS=5.895;HRun=0;HaplotypeScore=193.5582;InbreedingCoeff=0.4733;MQ=52.74;MQ0=6;MQRankSum=-7.943;QD=16.84;ReadPosRankSum=-4.951;VQSLOD=1.9849;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:24:17.80:0,18,308	./.	./.	./.	0/0:8,0:11:8.14:0,8,380	0/0:2,0:3:5.99:0,6,92	0/1:21,0:29:29.01:29,0,57	0/1:24,0:24:20.41:20,0,28	0/0:17,0:26:30.10:0,30,1640	0/0:15,0:15:27.06:0,27,524	0/0:9,0:12:11.33:0,11,228	0/1:16,0:25:75.11:75,0,93	1/1:11,6:17:16.87:589,17,0	1/1:13,7:20:15.05:587,15,0	0/0:16,0:22:6.76:0,7,166	0/0:22,0:28:36.12:0,36,2115	0/0:20,0:23:32.53:0,33,1826	0/0:9,0:9:13.29:0,13,292	1/1:11,3:14:8.98:163,9,0	1/1:18,9:28:17.65:684,18,0	1/1:22,6:28:0.88:2,1,0	1/1:9,9:18:8.15:332,8,0	0/1:8,0:13:45.35:64,0,45	0/1:16,0:21:19.12:19,0,113	1/1:9,9:18:24.08:877,24,0	0/0:17,0:17:29.59:0,30,1029	1/1:11,12:24:32.73:1290,33,0	0/0:5,0:4:9.03:0,9,374
chr10	37188779	.	A	AT	1023.48	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.302;DP=635;FS=1.497;HRun=5;HaplotypeScore=76.4342;InbreedingCoeff=0.9976;MQ=84.96;MQ0=0;MQRankSum=-0.502;QD=31.98;ReadPosRankSum=1.454;VQSLOD=4.3257;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,114,1205	0/0:9,0:9:27.07:0,27,290	0/0:28,0:28:66.11:0,66,685	0/0:17,0:16:33.06:0,33,342	0/0:21,0:21:57.14:0,57,612	0/0:17,0:17:51.13:0,51,548	0/0:22,0:22:24.46:0,24,606	0/0:28,0:28:69.14:0,69,727	0/0:21,0:21:54.13:0,54,580	0/0:23,0:23:69.17:0,69,741	0/0:26,0:26:72.13:0,72,754	0/0:22,0:22:66.17:0,66,709	0/0:19,0:19:54.14:0,54,580	0/0:21,0:21:63.14:0,63,669	0/0:27,0:27:75.19:0,75,806	0/0:24,0:24:69.17:0,69,742	0/0:21,0:21:54.13:0,54,580	0/0:33,0:33:96.20:0,96,1016	0/0:11,0:11:30.07:0,30,322	0/0:21,0:21:54.10:0,54,568	0/0:32,0:31:90.19:0,90,956	0/0:22,0:22:66.17:0,66,709	0/0:26,0:26:75.17:0,75,797	0/0:25,0:25:66.14:0,66,699	0/0:18,0:18:48.11:0,48,507	1/1:3,20:23:60.20:790,60,0	0/0:27,0:27:75.17:0,75,798	1/1:0,9:9:27.09:355,27,0
chr10	37188890	.	C	CTG	1111.86	PASS	AB=0.915;AC=18;AF=0.391;AN=46;BaseQRankSum=-1.880;DP=679;FS=0.000;HRun=0;HaplotypeScore=115.6153;InbreedingCoeff=-0.2112;MQ=59.29;MQ0=28;MQRankSum=2.023;QD=2.70;ReadPosRankSum=-3.255;VQSLOD=1.4843;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:44,0:43:45.71:88,0,46	./.	./.	./.	0/1:12,0:22:0:0,0,0	0/1:12,4:17:26:38,0,26	0/1:30,9:39:57.39:96,0,57	./.	0/0:23,0:23:8.42:0,8,42	1/1:20,7:25:26.16:272,26,0	0/1:6,3:9:29.90:42,0,30	0/1:24,1:25:46.21:108,0,46	0/0:14,0:16:5.43:0,5,28	0/0:10,0:16:0.13:0,0,9	0/1:18,7:24:70.30:114,0,70	0/0:11,0:19:11.32:0,11,55	0/0:23,0:28:0.96:0,1,11	0/1:14,3:17:34.17:191,0,34	0/1:22,0:18:0:0,0,0	0/1:11,0:12:0:0,0,0	1/1:54,0:50:1.82:5,2,0	0/1:16,0:24:0:0,0,0	0/1:18,0:19:14.11:14,0,35	0/1:37,3:38:34.84:241,0,35	./.	0/0:40,0:41:4.31:0,4,43	0/0:6,0:10:1.84:0,2,44	0/1:12,0:11:23.32:23,0,150
chr10	37189324	.	CCCAT	C	600.28	PASS	AB=0.976;AC=32;AF=0.842;AN=38;BaseQRankSum=-2.090;DP=209;FS=11.050;HRun=0;HaplotypeScore=31.5530;InbreedingCoeff=-0.1675;MQ=40.21;MQ0=42;MQRankSum=2.847;QD=3.37;ReadPosRankSum=-0.545;VQSLOD=-0.5332;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:8,0:7:1.12:21,1,0	./.	0/1:14,0:5:21.43:21,0,40	0/1:18,0:5:10.63:23,0,11	./.	1/1:6,0:4:5.37:34,5,0	1/1:11,0:5:2.94:18,3,0	./.	./.	1/1:8,0:3:3:25,3,0	./.	./.	1/1:7,2:5:9.01:122,9,0	1/1:3,0:1:2.99:24,3,0	1/1:5,0:1:2.50:9,2,0	1/1:10,0:7:5.37:47,5,0	0/1:10,2:9:5.97:111,0,6	0/1:12,0:7:10.04:10,0,32	./.	./.	1/1:30,1:16:4.20:83,4,0	1/1:3,1:2:5.91:38,6,0	0/1:4,0:2:0:0,0,0	0/1:9,0:7:5.71:8,0,6	1/1:3,1:2:3.01:49,3,0	1/1:5,0:1:3.01:39,3,0	1/1:5,0:3:2.92:17,3,0	./.
chr10	37189609	.	CCAT	C	602.60	PASS	AB=0.947;AC=10;AF=0.192;AN=52;BaseQRankSum=8.575;DP=895;DS;FS=10.020;HRun=0;HaplotypeScore=93.3605;InbreedingCoeff=0.1291;MQ=28.63;MQ0=200;MQRankSum=-8.116;QD=2.00;ReadPosRankSum=1.051;VQSLOD=1.1748;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:44,2:32:26.56:0,27,888	0/0:7,0:3:3.01:0,3,39	0/0:32,0:1:3.01:0,3,39	0/0:44,0:5:8.41:0,8,123	0/0:8,0:4:3.01:0,3,66	0/0:34,0:26:49.93:0,50,831	0/0:49,1:35:20.32:0,20,1202	0/0:42,0:6:3.01:0,3,40	0/0:33,0:24:10.08:0,10,937	0/1:52,0:20:99:112,0,562	0/0:10,0:5:3.01:0,3,66	0/0:30,0:19:26.90:0,27,415	1/1:26,0:11:16.56:205,17,0	0/1:24,0:16:24.25:185,0,24	0/0:29,1:17:24.08:0,24,462	0/0:32,0:17:19.21:0,19,617	0/0:70,0:54:27.57:0,28,1317	0/0:56,0:46:65.93:0,66,1245	0/0:29,0:1:2.84:0,3,14	./.	0/1:103,3:48:15.21:15,0,129	0/0:13,0:4:3.01:0,3,37	0/1:6,0:1:0:0,0,0	0/1:47,2:38:15.89:16,0,1079	./.	0/1:18,9:16:99:152,0,184	1/1:11,0:8:4.67:51,5,0	0/0:9,0:5:9.79:0,10,106
chr10	37189612	.	T	TC	1348.05	PASS	AB=0.864;AC=16;AF=0.308;AN=52;BaseQRankSum=8.620;DP=818;DS;FS=1.916;HRun=1;HaplotypeScore=81.4107;InbreedingCoeff=0.0256;MQ=29.97;MQ0=161;MQRankSum=-9.363;QD=3.18;ReadPosRankSum=2.793;VQSLOD=0.2268;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,3:31:42.84:0,43,596	0/0:5,2:3:3.01:0,3,42	0/0:32,0:1:3.01:0,3,39	0/0:45,0:6:15.48:0,15,160	0/0:8,0:3:3.01:0,3,39	0/0:30,2:26:6.33:0,6,578	0/0:45,3:36:57.73:0,58,869	0/0:42,0:6:3.01:0,3,39	0/1:28,4:24:28.66:29,0,628	0/1:34,1:20:69.28:69,0,384	0/0:7,0:5:3.01:0,3,39	0/0:20,3:16:26.91:0,27,348	1/1:11,11:11:27.09:398,27,0	0/1:9,11:18:2.84:427,0,3	0/0:24,0:15:24.08:0,24,311	0/1:28,5:21:44.61:45,0,415	0/0:36,25:51:33.62:0,34,917	0/1:32,19:44:17.62:18,0,753	1/1:24,2:1:3.01:45,3,0	./.	0/1:74,18:43:86.18:86,0,111	0/0:8,0:4:3:0,3,27	0/1:5,0:1:0:0,0,0	0/1:41,7:36:12.27:12,0,811	./.	0/1:24,1:16:99:113,0,170	1/1:4,6:8:15.05:224,15,0	0/1:8,2:6:33.04:33,0,64
chr10	37190171	.	TCCAC	T	223.21	PASS	AB=0.969;AC=13;AF=0.310;AN=42;BaseQRankSum=2.137;DP=785;FS=5.972;HRun=0;HaplotypeScore=37.3083;InbreedingCoeff=-0.1388;MQ=15.56;MQ0=289;MQRankSum=-2.917;QD=0.65;ReadPosRankSum=-0.808;VQSLOD=0.5854;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:18:17.44:0,17,194	./.	./.	./.	./.	0/0:28,0:7:6.20:0,6,113	0/0:57,0:13:12.83:0,13,119	./.	0/1:21,0:7:14.49:14,0,85	0/0:21,0:4:5.90:0,6,38	./.	0/0:24,2:10:8.98:0,9,72	0/1:23,2:5:18.58:43,0,19	0/1:18,2:8:57.96:80,0,58	0/1:22,0:7:11.98:12,0,38	0/0:25,0:6:2.98:0,3,21	0/1:39,2:24:28.57:29,0,265	0/0:22,0:10:11.25:0,11,125	0/1:37,1:3:41.24:47,0,41	1/1:13,0:3:3.15:13,3,0	0/1:94,3:29:39.68:40,0,51	1/1:16,0:8:2.78:14,3,0	0/0:14,0:3:2.99:0,3,24	0/0:23,0:8:12.04:0,12,166	0/1:14,0:6:0.83:30,0,1	0/1:36,0:6:28.88:29,0,62	0/0:16,0:4:4.56:0,5,40	./.
chr10	37190175	.	CCCAT	C	51.50	PASS	AB=0.992;AC=11;AF=0.250;AN=44;BaseQRankSum=3.256;DP=826;FS=3.156;HRun=0;HaplotypeScore=41.2608;InbreedingCoeff=0.0502;MQ=15.87;MQ0=298;MQRankSum=-3.306;QD=0.16;ReadPosRankSum=-0.931;VQSLOD=1.2083;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:50,2:21:23.73:0,24,246	./.	./.	./.	./.	0/0:28,0:7:11.99:0,12,163	0/0:59,0:12:17.95:0,18,224	1/1:52,0:4:1.82:5,2,0	0/0:23,0:8:10.02:0,10,180	0/0:22,0:4:6.02:0,6,89	./.	0/0:28,0:11:12.02:0,12,153	0/1:27,0:5:25.43:25,0,26	0/1:24,0:9:42.12:56,0,42	0/0:23,0:7:2.46:0,2,27	0/0:26,0:6:3:0,3,29	0/1:45,2:27:6.42:6,0,457	0/0:24,0:10:12.04:0,12,216	0/1:40,0:3:24.52:25,0,65	1/1:13,0:3:3.24:18,3,0	0/1:100,0:29:23.38:23,0,32	0/0:18,0:9:7.44:0,7,40	0/0:13,0:3:3.01:0,3,48	0/0:25,0:10:15.05:0,15,282	1/1:15,0:6:0.41:13,0,0	0/0:40,0:6:7.43:0,7,85	0/0:17,0:4:4.53:0,5,25	./.
chr10	37190239	.	TCCAC	T	750.73	PASS	AB=1.000;AC=30;AF=0.750;AN=40;BaseQRankSum=-2.550;DP=704;FS=0.000;HRun=0;HaplotypeScore=41.0300;InbreedingCoeff=0.2535;MQ=17.79;MQ0=256;MQRankSum=0.510;QD=1.48;ReadPosRankSum=-1.990;VQSLOD=0.7675;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:30,1:16:5.85:36,6,0	1/1:7,0:1:3.01:32,3,0	./.	./.	./.	1/1:27,0:10:9.45:107,9,0	1/1:61,0:15:5.92:49,6,0	./.	1/1:29,0:10:10.19:93,10,0	./.	0/0:7,0:3:2.90:0,3,16	1/1:30,1:9:2.94:18,3,0	1/1:24,0:5:2.80:13,3,0	0/0:17,0:5:5.23:0,5,49	0/0:25,0:4:2.97:0,3,20	1/1:21,0:7:2.92:17,3,0	0/1:44,0:19:2.54:156,0,3	0/1:25,0:13:13.76:53,0,14	1/1:29,0:3:4.54:26,5,0	1/1:10,1:7:4.26:39,4,0	1/1:94,0:21:5.95:48,6,0	./.	1/1:10,1:5:3:25,3,0	1/1:35,0:15:14.82:135,15,0	./.	1/1:27,0:6:2.97:20,3,0	0/0:12,0:4:2.80:0,3,13	./.
chr10	37190403	.	C	CCCACCCATCCAT	2397.18	PASS	AB=1.000;AC=28;AF=0.500;AN=56;BaseQRankSum=-0.161;DP=265;FS=1.017;HRun=0;HaplotypeScore=54.7819;InbreedingCoeff=0.5468;MQ=34.00;MQ0=39;MQRankSum=-5.068;QD=15.37;ReadPosRankSum=0.813;VQSLOD=1.6400;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:11:15:0,15,165	1/1:4,0:4:3.01:50,3,0	0/0:22,0:1:2.84:0,3,14	0/1:31,0:6:0.13:0,0,129	0/0:6,0:6:15.05:0,15,510	0/0:2,0:2:2.99:0,3,24	1/1:9,0:6:5.50:37,5,0	1/1:12,0:5:9.02:156,9,0	0/0:13,0:10:23.22:0,23,582	0/0:4,0:1:3.01:0,3,54	0/0:2,0:2:3.01:0,3,49	0/0:10,0:9:15.05:0,15,480	1/1:6,0:4:6.02:112,6,0	1/1:7,3:10:11.13:785,11,0	0/0:3,0:2:2.84:0,3,14	0/0:5,0:5:11.98:0,12,196	0/0:7,0:8:2.72:0,3,43	0/1:6,0:4:14.02:23,0,14	1/1:16,0:7:14.92:262,15,0	1/1:2,2:4:6.02:181,6,0	1/1:27,0:16:5.92:44,6,0	1/1:5,2:6:3.01:90,3,0	0/0:8,0:8:21.07:0,21,671	0/0:11,0:8:5.94:0,6,90	1/1:0,3:3:3.01:162,3,0	1/1:7,4:8:11.93:328,12,0	1/1:6,0:6:6.02:171,6,0	1/1:3,0:3:6.01:177,6,0
chr10	37190498	.	T	TTATC	6142.56	PASS	AB=0.749;AC=27;AF=0.540;AN=50;BaseQRankSum=-8.409;DP=495;FS=6.010;HRun=0;HaplotypeScore=81.0368;InbreedingCoeff=0.7099;MQ=57.47;MQ0=25;MQRankSum=3.686;QD=22.02;ReadPosRankSum=-0.538;VQSLOD=3.8347;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:10,19:32:39.13:910,39,0	0/0:5,0:5:9.03:0,9,132	./.	0/1:49,0:9:0:0,0,0	0/1:5,13:18:56.13:658,0,56	0/1:6,6:12:9.75:333,0,10	1/1:17,6:23:21.07:467,21,0	0/0:31,0:28:6:0,6,54	1/1:8,8:16:18.06:416,18,0	1/1:8,1:10:6.02:122,6,0	1/1:4,7:11:18.06:404,18,0	0/0:7,0:15:14.95:0,15,130	0/0:11,0:11:15.05:0,15,218	0/0:17,0:17:35.98:0,36,452	1/1:5,7:12:18.06:421,18,0	1/1:6,12:18:33.11:770,33,0	1/1:9,9:18:21.07:491,21,0	1/1:4,7:11:18.06:421,18,0	0/0:13,0:12:12.03:0,12,159	1/1:9,7:16:21.07:482,21,0	./.	1/1:9,4:14:9.03:203,9,0	./.	1/1:12,0:19:2.56:45,3,0	0/0:17,0:17:33.11:0,33,506	0/0:10,0:10:12.04:0,12,179	0/0:23,0:23:45.15:0,45,692	0/0:6,0:6:9.03:0,9,138
chr10	37191135	.	GA	G	1487.82	PASS	AB=0.800;AC=23;AF=0.411;AN=56;BaseQRankSum=4.512;DP=630;FS=8.296;HRun=14;HaplotypeScore=71.1043;InbreedingCoeff=0.3553;MQ=58.27;MQ0=13;MQRankSum=2.636;QD=4.81;ReadPosRankSum=1.639;VQSLOD=1.7157;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,2:51:55.48:0,55,795	1/1:1,8:9:20.78:143,21,0	0/0:23,0:9:1.53:0,2,55	0/0:14,0:8:1.59:0,2,46	0/1:24,3:28:16.97:17,0,258	0/0:22,1:22:24.98:0,25,345	0/0:25,2:27:25.44:0,25,537	1/1:15,14:26:35.33:242,35,0	0/0:23,0:23:4.01:0,4,253	0/1:24,2:26:9.27:9,0,240	0/0:20,1:24:16.32:0,16,308	0/1:10,3:13:2.59:3,0,115	1/1:6,9:14:19.35:127,19,0	1/1:6,9:15:14.33:117,14,0	0/0:28,0:27:33.34:0,33,415	0/1:6,0:7:5.46:5,0,83	0/0:31,0:30:47.10:0,47,402	0/1:21,4:25:23.84:24,0,354	0/1:10,14:25:5.07:244,0,5	1/1:4,13:17:10.71:217,11,0	1/1:5,10:15:14.84:103,15,0	0/1:6,11:17:1.33:130,0,1	0/1:22,3:26:15.91:16,0,420	0/0:29,1:31:21.55:0,22,444	1/1:3,11:14:9.31:78,9,0	0/0:8,1:30:31.89:0,32,242	0/1:10,16:26:5.73:198,0,6	0/0:3,0:10:14.37:0,14,85
chr10	37191539	.	G	GC	1998.39	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-5.903;DP=596;FS=1.059;HRun=6;HaplotypeScore=63.9251;InbreedingCoeff=0.9964;MQ=83.58;MQ0=0;MQRankSum=-3.381;QD=31.72;ReadPosRankSum=0.993;VQSLOD=4.1600;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:78.05:0,78,875	0/0:10,0:10:24.05:0,24,243	0/0:31,1:31:21.49:0,21,578	0/0:37,0:28:47.09:0,47,473	0/0:17,0:17:48.11:0,48,490	0/0:20,0:20:60.14:0,60,612	0/0:16,0:16:39.06:0,39,390	0/0:26,0:26:75.17:0,75,765	0/0:10,0:10:30.07:0,30,306	0/0:22,0:22:57.13:0,57,582	0/0:23,0:23:66.14:0,66,673	0/0:20,0:20:57.13:0,57,581	0/0:13,0:13:36.07:0,36,367	0/0:16,0:16:42.09:0,42,429	0/0:15,0:15:42.10:0,42,429	0/0:15,0:15:45.09:0,45,453	0/0:29,0:29:81.18:0,81,826	0/0:17,0:16:36.07:0,36,367	0/0:21,0:21:51.09:0,51,510	0/0:22,0:21:60.14:0,60,612	0/0:30,0:29:84.18:0,84,850	0/0:17,0:17:51.12:0,51,520	0/0:23,0:23:60.13:0,60,611	0/0:19,0:19:57.13:0,57,581	0/0:12,0:12:33.07:0,33,337	1/1:2,33:35:77.53:1215,78,0	0/0:14,0:14:39.09:0,39,397	1/1:1,27:28:72.23:905,72,0
chr10	37194558	.	AT	A	1651.81	PASS	AB=0.784;AC=24;AF=0.429;AN=56;BaseQRankSum=4.828;DP=525;FS=3.200;HRun=14;HaplotypeScore=78.6585;InbreedingCoeff=0.3162;MQ=60.13;MQ0=5;MQRankSum=1.745;QD=5.49;ReadPosRankSum=1.954;VQSLOD=2.8084;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:37:35.81:0,36,490	1/1:1,10:11:20.81:144,21,0	0/0:5,0:4:3:0,3,28	0/0:9,0:6:5.76:0,6,23	0/0:16,0:16:29.98:0,30,269	0/1:11,2:12:11.22:11,0,177	0/1:21,2:22:17.70:18,0,189	0/1:13,15:29:34.98:228,0,35	0/0:13,0:13:23.77:0,24,192	0/0:29,4:33:1.24:0,1,405	0/0:11,1:12:3.40:0,3,166	0/0:14,0:15:20.19:0,20,154	1/1:6,10:16:25.68:170,26,0	1/1:3,10:13:16.86:108,17,0	0/1:21,1:21:2.62:3,0,109	0/0:10,2:12:0.43:0,0,143	0/1:31,2:33:49.61:50,0,353	0/0:14,2:16:8.51:0,9,245	1/1:9,16:26:42.62:276,43,0	1/1:5,12:17:4.85:177,5,0	0/1:9,7:16:75.89:76,0,85	0/1:6,8:14:4.06:120,0,4	0/0:22,0:23:24.74:0,25,370	0/0:29,2:31:16.09:0,16,359	1/1:2,15:17:13.79:239,14,0	1/1:3,1:20:28.47:82,28,0	0/1:8,12:21:2.19:124,0,2	1/1:1,0:2:2.03:6,2,0
chr10	37196708	.	TTTTTTTTA	T	6816.56	PASS	AC=20;AF=0.370;AN=54;BaseQRankSum=8.341;DP=574;FS=2.450;HRun=0;HaplotypeScore=153.7047;InbreedingCoeff=0.9539;MQ=69.61;MQ0=12;MQRankSum=-7.036;QD=39.86;ReadPosRankSum=-0.587;VQSLOD=4.5216;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:60.19:0,60,2271	1/1:3,7:10:14.65:338,15,0	0/0:47,0:20:4.78:0,5,417	0/0:46,0:18:14.15:0,14,244	0/0:43,0:43:90.27:0,90,3335	0/0:27,0:27:78.27:0,78,2999	0/0:10,0:10:24.08:0,24,935	1/1:8,19:27:57.16:1026,57,0	0/0:13,0:13:24.08:0,24,709	0/0:31,0:31:78.26:0,78,2723	0/0:12,0:12:33.11:0,33,1068	0/0:9,0:9:15.05:0,15,613	1/1:4,9:13:27.09:675,27,0	1/1:4,14:18:39.13:920,39,0	0/0:10,0:10:27.09:0,27,939	0/0:14,0:14:30.07:0,30,1016	0/0:30,0:30:78.26:0,78,2964	0/0:24,0:24:54.18:0,54,1980	1/1:13,20:32:60.16:1095,60,0	1/1:2,15:17:30.10:660,30,0	1/1:5,4:7:6.02:109,6,0	1/1:3,11:14:30.06:648,30,0	0/0:12,0:12:30.10:0,30,1066	./.	1/1:2,10:12:18.06:446,18,0	0/0:29,0:29:81.27:0,81,2393	1/1:2,16:18:35.94:900,36,0	0/0:22,0:22:60.21:0,60,1739
chr10	37196709	.	T	TA	1954.87	PASS	AC=4;AF=0.074;AN=54;BaseQRankSum=-8.406;DP=575;FS=6.114;HRun=0;HaplotypeScore=98.2872;InbreedingCoeff=0.9507;MQ=69.50;MQ0=12;MQRankSum=-0.258;QD=38.33;ReadPosRankSum=1.221;VQSLOD=3.5519;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:69.12:0,69,936	0/0:10,0:10:26.87:0,27,246	0/0:47,0:20:46.14:0,46,436	0/0:49,0:20:23.91:0,24,333	0/0:43,0:43:99:0,123,1624	0/0:27,0:27:81.26:0,81,1114	0/0:10,0:10:30.05:0,30,380	0/0:26,0:26:65.68:0,66,695	0/0:13,0:13:39.03:0,39,442	0/0:32,0:32:93.25:0,93,1237	0/0:12,0:12:33.11:0,33,460	0/0:9,0:9:27.08:0,27,359	0/0:12,0:12:35.62:0,36,269	0/0:17,0:18:42.42:0,42,317	0/0:10,0:10:30.10:0,30,419	0/0:14,0:14:42.13:0,42,572	0/0:29,0:29:87.27:0,87,1180	0/0:24,0:24:68.89:0,69,869	0/0:33,0:32:80.29:0,80,848	0/0:17,0:17:38.76:0,39,345	0/0:9,0:7:14.92:0,15,129	0/0:14,0:14:7.78:0,8,200	0/0:12,0:12:33.10:0,33,445	./.	0/0:12,0:12:23.44:0,23,154	1/1:0,29:29:87.28:1221,87,0	0/0:18,0:18:41.51:0,42,301	1/1:0,22:22:60.20:855,60,0
chr10	37199154	.	AT	A	2601.74	PASS	AB=0.707;AC=36;AF=0.667;AN=54;BaseQRankSum=0.509;DP=436;FS=1.115;HRun=14;HaplotypeScore=54.2992;InbreedingCoeff=0.2589;MQ=65.06;MQ0=23;MQRankSum=1.134;QD=7.93;ReadPosRankSum=0.202;VQSLOD=2.3587;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:16,13:29:22.71:258,0,23	1/1:2,6:9:16.91:109,17,0	0/0:18,0:10:15.12:0,15,107	0/0:24,0:11:14.01:0,14,77	0/0:24,1:25:40.85:0,41,465	1/1:11,3:12:2.96:21,3,0	1/1:10,6:16:32.42:215,32,0	1/1:14,20:32:33.59:368,34,0	0/1:13,3:15:4.48:4,0,208	0/1:13,4:16:24.94:109,0,25	1/1:10,5:15:2.26:139,2,0	0/1:3,7:8:9.97:85,0,10	0/1:3,9:12:11.65:67,0,12	1/1:2,5:7:10.96:68,11,0	0/0:6,2:7:0:0,0,0	0/1:8,1:9:12.56:13,0,114	0/0:26,2:26:12.73:0,13,380	1/1:14,7:18:23.76:164,24,0	0/1:12,6:16:30.31:99,0,30	1/1:4,8:11:26.71:180,27,0	1/1:2,9:9:14.86:103,15,0	0/1:1,10:11:1.83:122,0,2	1/1:3,8:11:16.89:109,17,0	1/1:6,16:22:37.73:253,38,0	1/1:2,5:7:8.91:62,9,0	1/1:1,1:1:2.97:20,3,0	1/1:7,10:14:29.70:205,30,0	./.
chr10	37199783	.	A	AAACAACAAC	33689.87	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-5.578;DP=687;FS=7.061;HRun=0;HaplotypeScore=168.7526;InbreedingCoeff=0.9838;MQ=67.08;MQ0=0;MQRankSum=-14.634;QD=66.71;ReadPosRankSum=1.399;VQSLOD=4.0388;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,22:35:42.14:1757,42,0	1/1:8,0:8:18.06:770,18,0	0/0:38,0:36:45.73:0,46,951	0/0:29,0:28:45.02:0,45,1034	0/0:39,0:39:93.29:0,93,2484	1/1:6,11:20:27.09:1244,27,0	1/1:9,18:29:60.21:2588,60,0	1/1:33,0:33:63.77:817,64,0	0/0:30,0:30:69.19:0,69,1835	1/1:11,19:31:69.12:2617,69,0	1/1:4,11:17:30.10:1171,30,0	1/1:6,19:25:33.11:1528,33,0	1/1:20,0:20:24.08:1027,24,0	1/1:22,0:22:51.18:2185,51,0	1/1:10,16:30:51.18:2300,51,0	0/0:26,0:26:57.20:0,57,1545	0/0:20,0:20:48.15:0,48,1235	1/1:9,10:24:24.05:850,24,0	1/1:23,0:23:19.08:1081,19,0	1/1:22,0:22:36.06:1432,36,0	1/1:13,0:13:9.03:350,9,0	1/1:16,0:16:36.12:1541,36,0	1/1:6,11:20:30.10:1373,30,0	1/1:11,12:26:30.10:1216,30,0	1/1:19,0:19:39.13:1670,39,0	1/1:10,1:29:72.25:2759,72,0	1/1:28,0:28:57.20:2434,57,0	1/1:6,0:14:27.09:978,27,0
chr10	37199798	.	C	CAACAACAAT	31874.68	PASS	AB=1.000;AC=32;AF=0.571;AN=56;BaseQRankSum=-12.238;DP=680;FS=11.357;HRun=0;HaplotypeScore=160.1806;InbreedingCoeff=0.1217;MQ=68.90;MQ0=0;MQRankSum=-11.619;QD=63.62;ReadPosRankSum=6.587;VQSLOD=3.8560;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:24:82.71:1608,0,83	1/1:1,9:10:18.06:878,18,0	0/0:32,0:31:66.82:0,67,1489	0/0:27,0:27:65.98:0,66,1385	0/0:41,0:41:99:0,117,2907	0/1:20,0:20:99:928,0,110	0/1:30,0:30:99:1668,0,202	1/1:3,20:46:99:3487,127,0	0/0:31,0:31:90.15:0,90,2162	0/1:25,0:25:99:1358,0,218	0/1:14,0:14:59.81:855,0,60	0/1:22,0:22:99:1274,0,147	1/1:3,11:20:24.08:1170,24,0	1/1:0,19:22:51.18:2480,51,0	0/1:26,0:26:57.74:1636,0,58	0/0:26,0:26:75.18:0,75,1847	0/0:21,0:21:60.15:0,60,1514	0/1:20,0:20:76.82:657,0,77	1/1:3,16:30:63.31:2044,63,0	1/1:0,18:26:55.94:1740,56,0	1/1:2,10:18:14.74:553,15,0	1/1:1,19:23:41.97:1787,42,0	0/1:19,0:19:99:808,0,151	0/1:19,0:19:53.83:703,0,54	1/1:0,18:20:39.13:1902,39,0	0/1:26,0:25:99:1196,0,177	1/1:2,23:27:57.20:2780,57,0	0/1:14,0:14:99:364,0,128
chr10	37199968	.	G	GA	1860.14	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-8.654;DP=617;FS=13.737;HRun=9;HaplotypeScore=66.5153;InbreedingCoeff=0.9924;MQ=76.02;MQ0=0;MQRankSum=-0.328;QD=25.84;ReadPosRankSum=2.169;VQSLOD=3.2887;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:83.98:0,84,729	0/0:7,0:7:21:0,21,182	0/0:26,0:25:23.03:0,23,210	0/0:21,0:18:26.61:0,27,227	0/0:21,1:23:25.81:0,26,433	0/0:25,0:25:65.97:0,66,568	0/0:20,0:20:50.98:0,51,443	0/0:23,0:23:50.98:0,51,440	0/0:23,0:23:59.98:0,60,521	0/0:24,0:24:62.98:0,63,547	0/0:18,0:18:53.99:0,54,468	1/1:2,12:14:36.10:398,36,0	0/0:12,0:13:32:0,32,260	0/0:19,0:19:53.97:0,54,464	0/0:29,0:29:74.96:0,75,651	0/0:22,0:22:59.99:0,60,521	0/0:30,0:30:74.88:0,75,639	0/0:11,0:11:23.94:0,24,201	0/0:24,1:26:19.82:0,20,389	0/0:30,0:30:77.93:0,78,670	0/0:19,0:19:56.97:0,57,491	0/0:20,0:20:47.98:0,48,416	1/1:3,21:24:57.15:630,57,0	1/1:1,33:34:72.01:974,72,0	0/0:22,0:22:65.96:0,66,567	0/0:24,0:24:65.97:0,66,570	0/0:30,0:30:80.97:0,81,703	0/0:11,0:11:20.97:0,21,182
chr10	37201292	.	G	GAAA	4640.63	PASS	AB=1.000;AC=48;AF=0.857;AN=56;BaseQRankSum=2.636;DP=446;FS=4.260;HRun=21;HaplotypeScore=123.7264;InbreedingCoeff=0.5278;MQ=44.86;MQ0=21;MQRankSum=-3.369;QD=11.54;ReadPosRankSum=-1.383;VQSLOD=-0.1962;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:18:28.15:315,28,0	1/1:5,0:5:6.02:71,6,0	0/0:9,0:2:2.99:0,3,23	0/0:7,0:3:5.83:0,6,37	0/1:19,0:22:7.43:7,0,67	1/1:18,0:18:24.08:316,24,0	1/1:14,0:13:9.03:109,9,0	1/1:26,0:21:29.40:293,29,0	1/1:12,0:11:2.96:19,3,0	1/1:13,0:12:12.04:146,12,0	1/1:17,0:17:18.53:234,19,0	1/1:7,0:7:8.98:96,9,0	1/1:5,0:5:8.98:98,9,0	1/1:16,0:16:11.06:119,11,0	1/1:22,0:19:21.07:263,21,0	0/1:5,0:5:0:0,0,0	0/0:27,0:27:3.21:0,3,42	1/1:14,0:13:15.05:188,15,0	1/1:20,0:19:24.01:277,24,0	1/1:17,0:19:17.96:191,18,0	1/1:9,3:10:4.73:49,5,0	1/1:10,1:10:15.05:205,15,0	1/1:15,0:15:15.05:189,15,0	1/1:11,0:11:0.47:1,0,0	1/1:17,0:17:24.01:292,24,0	1/1:23,0:23:40.35:507,40,0	1/1:21,0:20:23.99:288,24,0	1/1:33,0:28:29.97:368,30,0
chr10	37201293	.	A	AAAAAAG	5749.64	PASS	AB=1.000;AC=34;AF=0.607;AN=56;BaseQRankSum=9.069;DP=469;FS=56.396;HRun=0;HaplotypeScore=152.4217;InbreedingCoeff=0.2768;MQ=44.59;MQ0=20;MQRankSum=-3.917;QD=15.75;ReadPosRankSum=-2.874;VQSLOD=2.1478;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:21:23.60:512,24,0	0/1:6,0:6:25.34:25,0,36	0/0:12,0:3:3.01:0,3,45	0/0:8,0:4:5.57:0,6,49	0/0:27,0:26:35.36:0,35,376	1/1:17,0:17:47.57:495,48,0	1/1:10,5:14:11.51:288,12,0	0/1:28,0:24:73.12:73,0,129	0/0:12,0:11:14:0,14,104	1/1:14,0:13:20.88:265,21,0	1/1:17,0:17:7.80:342,8,0	1/1:8,0:8:10.45:176,10,0	0/1:5,0:5:33.02:83,0,33	0/1:16,0:16:65.43:65,0,118	1/1:23,0:20:29.26:486,29,0	0/0:4,0:4:5.97:0,6,47	0/0:29,0:29:15.99:0,16,287	1/1:14,0:13:14.97:267,15,0	0/1:20,0:19:73.84:213,0,74	0/1:20,0:18:95.22:95,0,128	0/0:12,0:10:7.17:0,7,43	1/1:10,0:9:10.30:161,10,0	1/1:17,0:17:22.80:294,23,0	1/1:10,0:10:5.82:47,6,0	0/1:17,0:17:99:126,0,103	1/1:27,0:27:65.31:794,65,0	0/1:21,0:20:97.46:288,0,97	1/1:36,0:31:69.17:655,69,0
chr10	37201294	.	A	AAAAAG	5436.51	PASS	AB=0.995;AC=32;AF=0.571;AN=56;BaseQRankSum=8.204;DP=486;FS=36.864;HRun=0;HaplotypeScore=156.4005;InbreedingCoeff=0.1822;MQ=43.99;MQ0=20;MQRankSum=-4.985;QD=14.34;ReadPosRankSum=1.096;VQSLOD=2.6507;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:23:8.23:473,8,0	0/1:6,0:6:25.20:25,0,36	0/0:14,0:3:5.91:0,6,66	0/0:9,0:4:5.96:0,6,56	0/0:29,0:28:44.99:0,45,422	1/1:17,0:17:47.46:436,47,0	0/1:18,1:18:13.70:274,0,14	0/1:30,0:26:74.81:75,0,137	0/0:9,0:8:20.10:0,20,143	1/1:15,0:14:26.71:365,27,0	1/1:16,0:16:5.76:304,6,0	1/1:9,0:9:12.27:169,12,0	0/1:6,0:6:34.92:65,0,35	0/1:17,0:17:62.02:62,0,120	1/1:24,0:21:13.41:380,13,0	0/0:5,0:5:5.97:0,6,47	0/0:29,0:29:34.69:0,35,393	1/1:10,5:14:17.98:347,18,0	0/1:19,0:18:99:162,0,115	0/1:20,0:18:94.49:94,0,125	0/0:12,0:10:5.57:0,6,41	0/1:10,0:9:3.49:149,0,3	1/1:15,0:15:22.63:257,23,0	1/1:10,0:10:5.82:47,6,0	0/1:18,0:18:99:122,0,105	1/1:27,0:27:49.01:751,49,0	0/1:21,0:20:99:238,0,128	1/1:38,1:33:74.02:640,74,0
chr10	37201296	.	A	AAAG	2369.19	PASS	AB=0.985;AC=28;AF=0.500;AN=56;BaseQRankSum=7.674;DP=476;FS=38.236;HRun=0;HaplotypeScore=152.8714;InbreedingCoeff=-0.1119;MQ=43.59;MQ0=18;MQRankSum=-6.029;QD=6.25;ReadPosRankSum=5.816;VQSLOD=1.2002;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:23:3.26:199,0,3	0/1:7,0:7:1.68:2,0,55	0/0:15,0:3:8.18:0,8,61	0/0:9,0:4:8.64:0,9,82	0/0:29,0:28:61.91:0,62,557	1/1:17,0:17:28.82:247,29,0	0/1:15,0:14:64.80:117,0,65	0/1:29,0:27:36.68:37,0,216	0/0:11,0:10:19.78:0,20,155	0/1:9,4:12:16.39:198,0,16	1/1:9,5:15:4.64:124,5,0	0/1:10,0:10:28.29:49,0,28	0/1:6,0:6:15.95:16,0,39	0/1:18,0:18:3.95:4,0,137	0/1:25,0:22:56.67:149,0,57	0/0:5,0:5:8.97:0,9,74	0/0:28,0:28:47.96:0,48,493	1/1:14,0:13:17.45:149,17,0	0/1:18,0:17:40.21:40,0,142	0/1:19,0:17:21.93:22,0,136	0/1:10,0:8:7.39:7,0,45	0/1:8,0:7:9.13:74,0,9	1/1:14,0:14:1.96:96,2,0	1/1:9,0:9:5.85:47,6,0	0/1:18,0:18:57.58:58,0,134	0/1:28,0:28:2.58:382,0,3	0/1:21,0:20:88.82:89,0,137	1/1:39,0:33:28.22:432,28,0
chr10	37204344	.	CT	C	882.72	PASS	AB=0.676;AC=15;AF=0.278;AN=54;BaseQRankSum=0.846;DP=474;FS=0.621;HRun=12;HaplotypeScore=52.5726;InbreedingCoeff=0.5933;MQ=36.95;MQ0=73;MQRankSum=-0.659;QD=6.17;ReadPosRankSum=0.470;VQSLOD=1.5385;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:35:48.03:0,48,289	0/1:2,4:6:7.34:78,0,7	0/0:12,0:2:3.01:0,3,30	0/0:8,0:1:2.74:0,3,12	0/0:17,0:13:24.03:0,24,237	0/0:12,0:9:14.36:0,14,82	0/0:12,0:12:17.68:0,18,93	1/1:14,19:22:42.27:328,42,0	0/0:17,0:14:23.98:0,24,220	0/0:10,0:10:8.52:0,9,43	0/0:9,0:6:3.66:0,4,21	0/0:15,0:11:13.98:0,14,106	1/1:8,4:6:2.98:23,3,0	1/1:7,6:11:8.95:70,9,0	0/0:14,0:16:15.50:0,16,79	0/0:15,0:9:14.99:0,15,141	0/0:28,1:25:48.06:0,48,477	0/0:14,0:13:17.44:0,17,91	0/1:13,6:8:12.50:98,0,12	./.	1/1:8,12:18:22.21:167,22,0	0/1:2,2:4:16.24:17,0,16	0/0:10,0:9:11.82:0,12,101	0/0:24,0:17:27.05:0,27,274	1/1:6,10:11:23.89:186,24,0	0/0:16,0:14:32.93:0,33,320	1/1:8,10:12:11.92:93,12,0	0/0:26,0:26:38.42:0,38,403
chr10	37204369	.	C	CT	711.45	PASS	AB=0.808;AC=12;AF=0.231;AN=52;BaseQRankSum=-0.307;DP=359;FS=0.785;HRun=11;HaplotypeScore=41.4294;InbreedingCoeff=0.5921;MQ=45.51;MQ0=23;MQRankSum=-3.063;QD=7.04;ReadPosRankSum=-0.717;VQSLOD=0.8101;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:15,14:24:20.98:201,21,0	0/0:4,0:4:5.97:0,6,46	./.	./.	0/0:19,0:19:31.13:0,31,234	0/1:6,10:14:45.33:128,0,45	0/1:4,0:4:0:0,0,0	0/0:31,0:23:35.84:0,36,278	0/0:9,0:9:14.92:0,15,116	1/1:10,2:9:9.02:90,9,0	1/1:6,3:7:9.02:91,9,0	0/0:9,0:9:11.77:0,12,92	0/0:7,0:7:14.94:0,15,116	0/0:6,0:6:8.96:0,9,70	1/1:9,6:15:1.16:164,1,0	0/0:10,0:9:11.90:0,12,91	0/0:22,0:21:43.84:0,44,331	1/1:10,6:12:0.95:182,1,0	0/0:13,0:10:17.88:0,18,137	0/0:1,0:1:2.99:0,3,23	0/0:20,0:17:8.84:0,9,208	0/0:4,0:4:5.98:0,6,46	0/0:5,0:5:5.97:0,6,46	0/0:19,0:18:32.76:0,33,244	0/0:12,0:11:31.15:0,31,221	0/0:9,0:9:23.85:0,24,179	0/0:9,0:8:20.92:0,21,162	0/0:27,0:26:35.26:0,35,416
chr10	37204722	.	G	GA	1722.36	PASS	AB=0.909;AC=11;AF=0.196;AN=56;BaseQRankSum=-2.416;DP=474;FS=1.068;HRun=9;HaplotypeScore=80.6165;InbreedingCoeff=0.8248;MQ=75.53;MQ0=1;MQRankSum=0.450;QD=18.32;ReadPosRankSum=-1.298;VQSLOD=3.3987;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:4:4.62:0,5,71	0/1:9,1:10:3.22:3,0,197	0/0:47,0:35:69.21:0,69,575	0/0:31,0:22:28:0,28,240	0/0:16,0:16:38.97:0,39,334	0/0:5,0:5:12:0,12,104	0/0:6,0:6:18:0,18,156	1/1:3,16:19:41.91:422,42,0	0/0:19,0:19:38.98:0,39,338	0/0:9,0:9:22.22:0,22,182	0/0:6,0:1:3:0,3,26	0/0:29,0:29:38.84:0,39,563	0/0:16,0:16:41.91:0,42,356	0/0:21,0:21:23.09:0,23,342	0/0:6,0:6:15:0,15,130	0/0:25,0:25:50.88:0,51,443	0/0:32,0:32:57.68:0,58,644	0/0:4,0:4:10.88:0,11,72	1/1:6,17:22:51.12:551,51,0	1/1:1,6:8:14.86:179,15,0	1/1:2,17:19:36.10:398,36,0	0/0:11,0:13:34.06:0,34,270	0/0:14,0:14:38.95:0,39,329	0/0:27,0:27:65.98:0,66,573	0/0:10,0:10:27.88:0,28,236	0/0:19,0:19:50.97:0,51,439	1/1:1,13:13:10.06:339,10,0	0/0:19,0:19:53.55:0,54,446
chr10	37205115	.	GC	G	7162.17	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=15.389;DP=735;FS=0.995;HRun=2;HaplotypeScore=102.8962;InbreedingCoeff=0.9999;MQ=87.26;MQ0=0;MQRankSum=-7.707;QD=36.92;ReadPosRankSum=2.888;VQSLOD=5.0299;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,45:46:99:1713,132,0	0/0:15,0:15:45.15:0,45,674	0/0:23,0:23:69.15:0,69,969	0/0:27,0:27:75.22:0,75,1057	0/0:30,0:30:87.29:0,87,1303	1/1:0,41:41:99:1518,117,0	1/1:0,13:13:36.12:467,36,0	0/0:34,0:34:93.29:0,93,1337	0/0:24,0:24:72.24:0,72,1078	1/1:0,21:21:63.20:817,63,0	1/1:0,24:24:69.22:895,69,0	0/0:24,0:24:66.22:0,66,969	0/0:20,0:20:60.20:0,60,893	0/0:26,0:26:78.22:0,78,1142	1/1:0,32:32:90.29:1168,90,0	0/0:30,0:30:90.30:0,90,1348	0/0:32,0:32:96.31:0,96,1419	1/1:1,16:17:45.15:584,45,0	0/0:22,0:22:66.22:0,66,988	0/0:20,0:20:57.19:0,57,853	0/0:40,0:40:99:0,114,1708	0/0:27,0:27:81.26:0,81,1192	0/0:20,0:20:60.20:0,60,895	0/0:33,0:33:93.32:0,93,1393	0/0:12,0:12:33.09:0,33,472	0/0:36,0:36:99:0,105,1552	0/0:33,0:33:96.30:0,96,1400	0/0:13,0:13:39.13:0,39,583
chr10	37207607	.	C	CA	3726.64	PASS	AB=0.656;AC=38;AF=0.679;AN=56;BaseQRankSum=2.664;DP=494;FS=3.795;HRun=13;HaplotypeScore=84.4604;InbreedingCoeff=0.6145;MQ=63.04;MQ0=5;MQRankSum=0.609;QD=11.61;ReadPosRankSum=-2.271;VQSLOD=2.9531;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,1:16:28.84:165,29,0	1/1:2,6:9:17.86:154,18,0	0/0:16,0:9:0.42:0,0,49	0/0:22,0:7:12.29:0,12,81	0/0:28,1:32:23.55:0,24,292	1/1:8,0:18:42.22:233,42,0	1/1:2,2:9:17.47:117,17,0	1/1:13,16:30:21.37:326,21,0	0/0:15,4:19:1:0,1,142	1/1:10,2:29:68.68:403,69,0	1/1:13,3:24:40.53:243,41,0	1/1:4,6:10:6.01:56,6,0	1/1:5,9:14:17.97:159,18,0	0/1:3,8:11:22.98:83,0,23	1/1:5,1:18:11.24:152,11,0	0/0:15,0:16:25.59:0,26,167	0/0:22,1:23:16.56:0,17,259	1/1:3,1:8:14.55:91,15,0	0/1:7,4:10:5.55:96,0,6	1/1:4,18:24:18.53:410,19,0	1/1:2,6:9:4.92:64,5,0	1/1:1,8:9:0.44:146,0,0	1/1:5,12:18:15.63:189,16,0	1/1:2,7:9:12.01:111,12,0	1/1:5,9:13:6.45:202,6,0	0/0:24,0:25:30.81:0,31,207	1/1:6,21:27:17.58:327,18,0	0/0:19,0:18:0.04:0,0,102
chr10	37207643	.	C	CA	732.49	PASS	AB=0.933;AC=5;AF=0.089;AN=56;BaseQRankSum=-2.650;DP=569;FS=8.825;HRun=9;HaplotypeScore=107.6544;InbreedingCoeff=0.7541;MQ=59.81;MQ0=9;MQRankSum=-0.832;QD=12.85;ReadPosRankSum=-0.566;VQSLOD=2.5462;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:53.94:0,54,490	0/0:9,0:9:23.99:0,24,208	0/0:21,0:12:13.21:0,13,179	0/0:22,0:8:13.81:0,14,140	0/0:33,0:33:77.91:0,78,667	0/0:27,0:27:65.90:0,66,559	0/0:7,0:7:17.92:0,18,147	0/0:40,0:38:83.95:0,84,729	0/0:17,0:17:35.98:0,36,312	0/0:33,0:31:74.92:0,75,638	0/0:25,0:23:44.08:0,44,471	0/0:13,0:13:32.49:0,32,269	0/0:13,0:13:26.97:0,27,231	0/0:20,0:20:41.37:0,41,335	0/0:21,0:22:52.15:0,52,434	0/0:21,0:21:56.98:0,57,494	0/0:24,0:24:56.97:0,57,494	0/0:10,0:10:23.97:0,24,203	0/0:20,0:18:35.97:0,36,312	0/0:28,0:28:73.77:0,74,629	0/1:13,1:13:62.65:63,0,129	0/0:15,0:14:35.98:0,36,310	0/0:19,0:19:44.96:0,45,386	0/0:10,0:10:23.97:0,24,203	0/0:9,0:9:14.89:0,15,127	1/1:8,17:24:45.02:468,45,0	0/0:27,0:27:49.98:0,50,416	1/1:1,17:18:30.08:332,30,0
chr10	37208908	.	G	GT	2844.69	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-11.473;DP=526;FS=3.302;HRun=6;HaplotypeScore=72.9819;InbreedingCoeff=0.9355;MQ=79.77;MQ0=0;MQRankSum=-1.521;QD=29.63;ReadPosRankSum=2.800;VQSLOD=4.5131;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:36.07:0,36,362	0/0:11,0:11:33.08:0,33,337	0/0:16,0:16:32.20:0,32,340	0/0:13,0:13:27.05:0,27,273	1/1:4,36:40:99:1320,108,0	0/0:23,0:23:60.12:0,60,607	0/0:11,0:11:30.07:0,30,306	0/0:18,0:18:48.09:0,48,479	1/1:4,12:16:26.92:339,27,0	0/0:28,0:28:81.18:0,81,822	0/0:21,0:21:63.04:0,63,617	0/0:18,0:18:39.04:0,39,383	0/0:11,0:11:27.06:0,27,275	0/0:9,0:9:18.01:0,18,174	0/0:21,0:21:57.13:0,57,581	1/1:0,21:22:63.19:778,63,0	1/1:1,17:18:45.14:566,45,0	0/0:16,1:17:1.35:0,1,329	0/0:16,0:16:36.07:0,36,367	0/0:23,0:23:60.13:0,60,612	0/0:9,0:9:18.04:0,18,183	0/0:17,0:17:51.11:0,51,520	0/0:24,0:24:57.12:0,57,581	0/0:14,0:14:36.08:0,36,367	0/0:22,0:22:57.10:0,57,568	0/0:19,0:19:51.09:0,51,512	0/0:34,0:34:87.19:0,87,882	0/0:19,0:19:48.07:0,48,478
chr10	37208937	.	T	TA	9759.91	PASS	AB=0.600;AC=43;AF=0.768;AN=56;BaseQRankSum=-12.815;DP=504;FS=18.318;HRun=9;HaplotypeScore=55.0196;InbreedingCoeff=0.8710;MQ=69.61;MQ0=0;MQRankSum=-2.228;QD=25.22;ReadPosRankSum=2.061;VQSLOD=3.6324;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:4,8:12:25.04:205,0,25	1/1:1,9:10:27.07:299,27,0	0/0:13,0:14:6.61:0,7,140	0/0:9,0:8:20.96:0,21,177	0/0:40,1:41:77.76:0,78,894	1/1:5,20:25:45.12:498,45,0	1/1:1,9:11:29.91:313,30,0	1/1:1,15:16:45.12:498,45,0	0/0:11,0:11:29.99:0,30,260	1/1:5,14:19:42.11:465,42,0	1/1:2,22:24:66.16:721,66,0	1/1:2,19:21:28.07:529,28,0	1/1:3,8:11:18.05:199,18,0	1/1:0,5:5:12.03:133,12,0	1/1:2,15:17:36.10:398,36,0	0/0:21,0:21:47.97:0,48,417	0/0:21,0:21:62.96:0,63,541	1/1:5,13:18:30.07:332,30,0	1/1:5,13:18:42.09:453,42,0	1/1:2,23:25:60.16:663,60,0	1/1:1,6:7:18.05:199,18,0	1/1:4,15:19:45.12:498,45,0	1/1:1,24:25:57.02:630,57,0	1/1:1,12:13:33.09:365,33,0	1/1:5,22:27:57.15:631,57,0	1/1:2,17:19:48:503,48,0	1/1:2,27:29:69.19:763,69,0	1/1:1,15:16:42.11:464,42,0
chr10	37209091	.	A	AT	6422.78	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-14.637;DP=671;FS=1.487;HRun=4;HaplotypeScore=61.2044;InbreedingCoeff=0.9998;MQ=82.16;MQ0=0;MQRankSum=-2.189;QD=36.70;ReadPosRankSum=1.154;VQSLOD=5.1466;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,21:22:60.20:821,60,0	0/0:9,0:9:27.08:0,27,305	0/0:21,0:21:45.73:0,46,499	0/0:16,0:16:41.99:0,42,457	0/0:28,0:28:84.24:0,84,953	1/1:0,22:22:60.20:821,60,0	1/1:2,17:19:42.14:574,42,0	0/0:36,0:36:96.27:0,96,1089	0/0:20,0:20:54.15:0,54,613	1/1:3,30:33:90.30:1231,90,0	1/1:1,27:28:78.26:1067,78,0	0/0:18,0:18:48.13:0,48,544	0/0:23,0:23:66.16:0,66,736	0/0:14,0:14:42.12:0,42,476	1/1:1,27:28:75.25:1026,75,0	0/0:22,0:22:63.15:0,63,696	0/0:35,0:35:93.24:0,93,1043	1/1:2,21:23:66.19:883,66,0	0/0:26,0:26:63.15:0,63,695	0/0:37,0:37:99:0,108,1225	0/0:18,0:18:54.15:0,54,613	0/0:27,0:27:81.22:0,81,909	0/0:24,0:24:57.16:0,57,646	0/0:14,0:14:36.08:0,36,397	0/0:22,0:22:60.15:0,60,662	0/0:28,1:29:43.19:0,43,877	0/0:35,0:35:99:0,99,1123	0/0:22,0:21:48.14:0,48,544
chr10	37209711	.	TAGAC	T	2874.40	PASS	AB=0.910;AC=23;AF=0.426;AN=54;BaseQRankSum=-3.506;DP=687;FS=14.044;HRun=0;HaplotypeScore=176.0204;InbreedingCoeff=0.5116;MQ=62.27;MQ0=8;MQRankSum=3.885;QD=8.74;ReadPosRankSum=4.354;VQSLOD=1.8992;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:31:0.60:2,1,0	1/1:7,0:7:2.99:23,3,0	0/0:37,0:26:45.12:0,45,667	0/0:51,0:38:54.17:0,54,874	1/1:7,25:32:12.17:181,12,0	0/0:10,0:12:0.88:0,1,3	./.	0/0:25,0:19:17.90:0,18,146	0/1:12,21:33:0:0,0,0	0/1:23,0:22:23.95:70,0,24	0/0:10,0:12:0.47:0,0,1	0/1:24,0:24:48.83:240,0,49	0/0:16,0:15:33.10:0,33,492	0/0:23,0:21:45.14:0,45,729	0/0:24,0:28:5.89:0,6,50	1/1:8,21:29:6.49:85,6,0	1/1:20,1:21:45.13:690,45,0	1/1:12,0:13:4.94:44,5,0	0/1:11,0:9:12.61:13,0,63	0/0:14,0:14:21.06:0,21,341	0/0:36,0:35:48.66:0,49,634	0/0:31,0:31:34.95:0,35,485	1/1:17,0:18:9.40:86,9,0	0/1:41,0:42:87.85:344,0,88	0/0:13,0:12:27.06:0,27,392	1/1:33,0:32:46.31:889,46,0	0/0:30,0:29:54.54:0,55,815	1/1:7,3:10:24.97:386,25,0
chr10	37209747	.	CAG	C	161.71	PASS	AB=0.962;AC=6;AF=0.107;AN=56;BaseQRankSum=5.332;DP=593;FS=0.784;HRun=0;HaplotypeScore=168.4756;InbreedingCoeff=0.0537;MQ=44.72;MQ0=25;MQRankSum=-2.244;QD=1.48;ReadPosRankSum=-2.022;VQSLOD=2.1170;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:38,2:38:18.42:39,0,18	0/0:4,0:4:2.97:0,3,20	0/0:15,0:7:18.91:0,19,218	0/0:25,1:12:20.71:0,21,246	0/0:29,0:28:29.08:0,29,505	0/0:15,0:15:5.31:0,5,32	0/0:34,0:30:9.32:0,9,53	0/0:26,0:15:38.53:0,39,633	0/0:20,0:20:3.01:0,3,58	0/1:27,1:22:99:138,0,169	1/1:8,1:9:2.70:23,3,0	0/0:25,0:24:33.78:0,34,339	0/1:19,0:18:54.08:54,0,430	0/0:22,0:19:15.06:0,15,614	0/0:12,2:13:1.14:0,1,35	0/0:22,0:20:14.68:0,15,229	0/0:24,0:24:62.47:0,62,1026	0/1:12,1:12:24.93:25,0,44	0/0:11,0:5:15.05:0,15,282	0/0:11,0:11:18.06:0,18,329	0/0:24,0:22:30.09:0,30,483	0/0:20,0:20:24:0,24,416	0/0:11,0:10:5.92:0,6,39	0/0:41,0:39:57.41:0,57,574	0/0:17,0:16:21.03:0,21,388	0/0:38,0:34:93.31:0,93,1488	0/0:22,0:21:28.21:0,28,809	0/0:13,0:12:36.11:0,36,542
chr10	37209753	.	G	GAC	309.33	PASS	AB=0.992;AC=11;AF=0.196;AN=56;BaseQRankSum=3.000;DP=592;FS=19.607;HRun=0;HaplotypeScore=171.1510;InbreedingCoeff=0.0256;MQ=42.92;MQ0=24;MQRankSum=-2.238;QD=1.36;ReadPosRankSum=-3.752;VQSLOD=0.5584;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:41,0:39:9.18:20,0,9	0/0:4,0:4:3.01:0,3,43	0/0:20,0:7:8.13:0,8,115	0/0:30,0:13:13.85:0,14,147	0/0:28,0:27:33.02:0,33,443	0/0:15,0:15:3.16:0,3,28	0/0:30,0:26:8.20:0,8,45	0/0:31,0:18:34.94:0,35,497	0/0:16,0:16:5.97:0,6,64	0/1:29,0:23:70.69:71,0,138	0/1:8,0:8:0.28:0,0,0	1/1:24,2:25:7.96:161,8,0	0/1:18,0:17:62.91:63,0,235	0/1:23,0:20:16.20:16,0,316	0/1:13,0:12:13.09:16,0,13	0/0:19,0:17:18.06:0,18,257	0/0:23,0:23:59.88:0,60,946	0/1:13,0:12:11.82:12,0,58	0/0:10,0:5:15.02:0,15,165	0/0:10,0:10:15.04:0,15,181	0/0:22,0:20:21.03:0,21,215	0/0:20,0:20:17.85:0,18,208	0/0:5,6:10:1.72:0,2,4	0/1:36,3:37:19.22:83,0,19	0/1:18,0:17:3.90:4,0,196	0/0:40,0:36:88.34:0,88,999	0/0:20,0:19:16.82:0,17,410	0/0:13,0:12:35.91:0,36,433
chr10	37209898	.	GAACAAA	G	4819.86	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=3.232;DP=549;FS=14.932;HRun=0;HaplotypeScore=122.7480;InbreedingCoeff=0.9163;MQ=51.00;MQ0=23;MQRankSum=-6.357;QD=24.97;ReadPosRankSum=-3.099;VQSLOD=3.0401;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:36:70.67:0,71,493	1/1:4,7:10:15.05:304,15,0	0/0:8,0:3:8.99:0,9,206	0/0:11,0:5:9.69:0,10,368	0/0:34,0:32:72.25:0,72,2313	0/0:12,0:11:26.64:0,27,236	0/0:18,0:15:32.61:0,33,258	1/1:13,20:29:51.14:813,51,0	0/0:15,0:14:24.08:0,24,730	0/0:22,0:19:44.10:0,44,353	0/0:18,0:17:38.26:0,38,332	0/0:22,0:21:45.15:0,45,1472	1/1:4,2:4:6.02:124,6,0	1/1:8,5:13:12.04:249,12,0	0/0:17,0:14:5.62:0,6,27	0/0:28,0:25:54.19:0,54,1625	0/0:34,0:31:81.23:0,81,2332	0/0:19,0:18:36.55:0,37,279	1/1:10,8:15:24.03:382,24,0	1/1:6,14:20:39.08:698,39,0	1/1:4,4:7:3.01:57,3,0	1/1:4,11:13:24:424,24,0	0/0:31,0:29:57.10:0,57,1564	0/0:29,0:25:48.16:0,48,1531	1/1:10,6:14:18.06:360,18,0	1/1:7,14:19:42.07:736,42,0	1/1:11,11:22:20.74:429,21,0	1/1:2,8:9:12.04:245,12,0
chr10	37209926	.	AAACT	A	5514	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=10.824;DP=508;FS=3.136;HRun=0;HaplotypeScore=106.9663;InbreedingCoeff=0.9049;MQ=65.16;MQ0=1;MQRankSum=-7.299;QD=44.11;ReadPosRankSum=5.802;VQSLOD=5.2581;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,35:34:72.25:1413,72,0	0/0:11,0:11:15.09:0,15,374	0/0:13,0:11:26.28:0,26,599	0/0:13,0:10:29.12:0,29,603	0/0:31,0:31:93.29:0,93,2425	1/1:0,12:12:21.07:418,21,0	1/1:2,12:13:30.10:598,30,0	0/0:37,0:35:82.16:0,82,1392	0/0:8,0:8:24.08:0,24,635	1/1:0,22:22:66.22:1262,66,0	1/1:1,18:18:51.17:986,51,0	0/0:20,0:20:60.21:0,60,1587	0/0:4,0:4:3.64:0,4,120	0/0:9,0:9:4.15:0,4,193	1/1:0,4:4:6.02:120,6,0	0/0:17,0:17:48.16:0,48,1293	0/0:37,0:37:99:0,102,2590	1/1:1,18:19:36.12:717,36,0	0/0:19,0:19:43.05:0,43,807	0/0:22,0:22:25.31:0,25,488	0/0:9,0:9:13.60:0,14,258	0/0:19,0:19:28.92:0,29,511	0/0:27,0:27:75.24:0,75,1904	0/0:20,0:20:51.15:0,51,1311	0/0:14,0:14:21.43:0,21,436	0/0:23,0:23:24.57:0,25,544	0/0:18,0:17:13.36:0,13,349	0/0:12,0:12:9.53:0,10,262
chr10	37210004	.	CA	C	1999.38	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=7.159;DP=546;FS=5.986;HRun=2;HaplotypeScore=53.3589;InbreedingCoeff=0.9955;MQ=75.34;MQ0=0;MQRankSum=1.291;QD=34.47;ReadPosRankSum=1.794;VQSLOD=3.7311;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:75.25:0,75,1120	0/0:6,0:6:18.06:0,18,270	0/0:13,0:13:36.12:0,36,527	0/0:9,0:9:24.04:0,24,319	0/0:27,0:27:75.25:0,75,1124	0/0:16,0:16:36.09:0,36,516	0/0:12,0:12:36.12:0,36,539	0/0:22,0:22:66.22:0,66,986	0/0:9,0:9:27.09:0,27,405	0/0:24,0:23:66.18:0,66,963	0/0:18,0:18:48.12:0,48,694	1/1:0,11:11:33.11:428,33,0	0/0:17,0:17:45.14:0,45,653	0/0:11,0:11:30.10:0,30,450	0/0:19,0:19:48.14:0,48,679	0/0:18,0:18:54.18:0,54,809	0/0:32,0:32:87.27:0,87,1275	0/0:28,0:28:66.20:0,66,966	0/0:16,0:16:45.15:0,45,675	0/0:26,0:26:78.25:0,78,1149	0/0:13,0:13:39.13:0,39,585	0/0:17,0:17:42.14:0,42,629	1/1:0,24:24:66.21:857,66,0	1/1:0,23:23:66.21:857,66,0	0/0:28,0:27:81.27:0,81,1214	0/0:33,0:33:99:0,99,1467	0/0:28,0:28:84.28:0,84,1251	0/0:15,0:15:36.12:0,36,540
chr10	37210743	.	AAAC	A	14398.78	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=8.913;DP=627;FS=0.850;HRun=0;HaplotypeScore=102.4813;InbreedingCoeff=0.9422;MQ=67.23;MQ0=2;MQRankSum=-2.966;QD=31.65;ReadPosRankSum=3.709;VQSLOD=5.2943;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,14:20:39.13:569,39,0	1/1:0,4:4:9.03:131,9,0	0/0:42,0:33:52.94:0,53,929	0/0:32,0:21:7.93:0,8,342	0/0:32,1:33:36.81:0,37,1386	1/1:4,16:20:42.14:612,42,0	1/1:2,15:17:39.13:568,39,0	1/1:12,32:45:96.21:1246,96,0	0/0:17,0:17:45.15:0,45,926	1/1:5,23:28:69.23:1004,69,0	1/1:8,22:30:63.17:894,63,0	1/1:2,9:11:21.07:298,21,0	1/1:2,13:15:39.13:568,39,0	1/1:4,8:12:24.08:345,24,0	1/1:0,14:14:39.13:567,39,0	0/0:26,0:26:72.25:0,72,1482	0/0:20,2:22:4.35:0,4,824	1/1:6,13:19:24.08:350,24,0	1/1:3,17:20:51.16:709,51,0	1/1:3,18:21:51.14:715,51,0	1/1:2,15:17:39.13:558,39,0	1/1:2,14:16:42.14:612,42,0	1/1:1,17:18:42.14:605,42,0	1/1:1,11:12:30.10:437,30,0	1/1:5,23:28:57.19:830,57,0	1/1:7,30:37:87.24:1207,87,0	1/1:2,22:24:60.20:874,60,0	1/1:10,17:27:48.16:700,48,0
chr10	37212090	.	C	CTGTCTGTAT	29274.36	PASS	AB=0.913;AC=26;AF=0.464;AN=56;BaseQRankSum=-4.935;DP=901;FS=9.053;HRun=0;HaplotypeScore=328.9152;InbreedingCoeff=-0.8667;MQ=48.98;MQ0=1;MQRankSum=-12.902;QD=34.48;ReadPosRankSum=-5.447;VQSLOD=2.1861;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:43,0:43:99:874,0,1950	0/1:11,3:14:99:392,0,557	0/0:28,0:23:51.17:0,51,1414	0/0:24,0:23:42.13:0,42,1005	0/1:37,0:37:99:625,0,1696	0/1:38,0:38:99:1018,0,1834	0/1:28,0:28:99:1271,0,1040	0/1:56,10:65:99:3730,0,2170	0/1:40,0:40:99:1702,0,1637	0/1:34,0:34:99:1323,0,801	0/1:35,0:35:99:1066,0,1111	0/1:21,5:27:99:849,0,1178	0/1:14,6:21:99:1369,0,471	0/1:19,11:31:99:1676,0,818	0/1:48,0:48:99:1723,0,2077	0/1:35,0:35:99:847,0,1691	0/1:27,0:26:99:318,0,1259	0/1:17,0:17:99:140,0,783	0/1:28,3:32:99:1355,0,1234	0/1:30,8:39:99:1259,0,1594	0/1:30,5:35:99:1192,0,1150	0/1:20,5:26:99:640,0,1367	0/1:21,5:27:99:835,0,1350	0/1:22,4:28:99:502,0,986	0/1:20,4:24:99:1027,0,798	0/1:31,0:31:99:1262,0,1191	0/1:46,9:55:99:1939,0,2558	0/1:11,0:11:99:339,0,402
chr10	37213304	.	TCA	T	1783.19	PASS	AB=0.968;AC=28;AF=0.500;AN=56;BaseQRankSum=8.461;DP=421;FS=0.432;HRun=0;HaplotypeScore=106.6273;InbreedingCoeff=0.1507;MQ=62.98;MQ0=11;MQRankSum=-4.831;QD=6.88;ReadPosRankSum=5.221;VQSLOD=3.0619;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:18,2:20:52.60:151,0,53	0/1:6,0:6:9.55:31,0,10	0/0:35,0:16:41.19:0,41,511	0/0:52,0:18:32.13:0,32,434	0/0:10,0:10:13.68:0,14,138	1/1:19,1:20:22.34:181,22,0	1/1:9,2:11:22.66:150,23,0	0/1:18,0:18:55.68:56,0,95	0/0:11,0:11:15.43:0,15,98	0/1:15,2:15:64.15:107,0,64	0/1:15,0:14:17.30:107,0,17	0/1:11,0:11:40.02:53,0,40	1/1:9,1:10:11.46:101,11,0	1/1:6,2:8:3.69:123,4,0	1/1:12,2:14:11.72:149,12,0	0/1:12,0:12:0.05:0,0,64	0/0:26,0:26:18.31:0,18,207	0/1:12,2:14:21.26:145,0,21	0/1:15,0:14:9.93:10,0,126	1/1:14,0:14:21.07:88,21,0	1/1:12,0:12:0.89:89,1,0	0/1:7,0:7:6.32:97,0,6	0/1:10,0:10:2.51:3,0,28	0/0:6,0:5:8.78:0,9,57	1/1:6,3:9:24.73:168,25,0	0/0:13,0:13:16.90:0,17,180	0/1:15,1:16:32.05:156,0,32	0/0:9,0:9:21.14:0,21,154
chr10	37213306	.	ACC	A	5381.45	PASS	AB=0.749;AC=42;AF=0.750;AN=56;BaseQRankSum=2.638;DP=428;FS=8.870;HRun=11;HaplotypeScore=97.1422;InbreedingCoeff=0.5837;MQ=61.74;MQ0=15;MQRankSum=-3.550;QD=18.95;ReadPosRankSum=0.739;VQSLOD=3.4792;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:14,3:20:29:271,29,0	1/1:3,3:6:15.03:159,15,0	0/0:41,0:16:33.62:0,34,347	0/0:54,0:17:14.06:0,14,122	0/1:5,0:10:16.64:17,0,24	1/1:11,8:19:50.70:510,51,0	1/1:3,7:10:30.04:308,30,0	1/1:7,9:17:30.06:318,30,0	0/0:4,0:11:17.47:0,17,61	1/1:11,6:15:33.06:347,33,0	1/1:9,5:13:36.01:343,36,0	0/1:11,0:13:16.35:46,0,16	1/1:2,8:10:27.06:285,27,0	1/1:6,3:9:20.60:184,21,0	1/1:10,5:15:39.08:407,39,0	0/0:7,0:12:23.02:0,23,88	0/0:11,0:26:45.84:0,46,165	1/1:11,3:14:29.91:301,30,0	1/1:10,3:13:20.36:187,20,0	1/1:4,9:14:41.46:414,41,0	1/1:11,3:13:11.02:229,11,0	1/1:1,5:6:18.04:190,18,0	0/1:4,0:9:5.04:71,0,5	1/1:5,0:5:0.88:2,1,0	1/1:3,6:9:27.07:286,27,0	1/1:10,0:13:2.49:85,2,0	1/1:8,7:15:39.06:396,39,0	0/1:7,0:9:12.93:25,0,13
chr10	37213325	.	AC	A	2422.63	PASS	AB=0.958;AC=26;AF=0.464;AN=56;BaseQRankSum=7.536;DP=524;FS=7.578;HRun=1;HaplotypeScore=142.6646;InbreedingCoeff=0.8513;MQ=54.44;MQ0=29;MQRankSum=-4.864;QD=7.67;ReadPosRankSum=-1.162;VQSLOD=0.0927;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:25,3:27:35.58:204,36,0	0/0:6,0:6:17.91:0,18,162	0/1:53,2:16:1.62:2,0,134	0/1:72,4:14:11:11,0,40	0/0:9,0:8:23.86:0,24,226	1/1:19,1:20:45.66:264,46,0	1/1:9,1:10:25.55:126,26,0	0/0:19,1:19:18.32:0,18,310	0/0:17,0:17:43.68:0,44,414	1/1:20,3:19:41.60:215,42,0	1/1:14,0:12:31.40:174,31,0	1/1:5,6:11:28.74:255,29,0	0/0:11,0:11:30.86:0,31,244	0/0:10,0:10:3.11:0,3,147	1/1:16,1:17:10.63:169,11,0	0/0:14,0:13:41.14:0,41,340	0/0:26,0:26:51.27:0,51,475	1/1:11,1:12:24.14:118,24,0	0/0:27,0:27:44.89:0,45,542	0/0:17,0:17:50.20:0,50,460	0/0:10,0:9:21.07:0,21,262	0/0:10,1:11:20.23:0,20,281	1/1:4,6:10:23.95:220,24,0	1/1:8,2:9:11:96,11,0	0/0:14,0:14:33.16:0,33,301	1/1:14,6:19:53.86:513,54,0	0/0:16,0:15:41.93:0,42,417	1/1:7,2:9:27.02:277,27,0
chr10	37213335	.	AC	A	4405.72	PASS	AB=0.944;AC=41;AF=0.732;AN=56;BaseQRankSum=8.914;DP=572;FS=2.500;HRun=1;HaplotypeScore=149.3375;InbreedingCoeff=0.5348;MQ=53.84;MQ0=34;MQRankSum=-5.796;QD=10.29;ReadPosRankSum=-2.206;VQSLOD=2.1397;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:29:64.75:414,65,0	1/1:4,1:5:1.03:40,1,0	0/0:71,1:19:15.84:0,16,232	0/1:69,2:12:4.70:17,0,5	0/0:14,0:13:33.93:0,34,359	1/1:22,0:22:54.34:341,54,0	1/1:12,0:12:35.42:233,35,0	1/1:22,1:22:11.28:114,11,0	0/0:19,0:19:54.09:0,54,639	1/1:21,0:17:46.70:311,47,0	1/1:13,0:11:29.28:188,29,0	1/1:9,2:11:21.20:236,21,0	1/1:11,0:11:5.91:96,6,0	0/1:9,0:9:5.65:85,0,6	1/1:18,0:18:14.79:234,15,0	0/0:16,0:15:48.14:0,48,601	0/0:23,0:23:62.08:0,62,773	1/1:11,0:11:29.84:179,30,0	1/1:29,1:29:9.94:163,10,0	0/1:19,2:20:12.39:188,0,12	0/1:10,1:9:2.27:22,0,2	1/1:11,2:13:20.65:216,21,0	1/1:7,6:12:32.76:301,33,0	1/1:3,9:11:11.11:143,11,0	1/1:16,0:16:6.21:107,6,0	1/1:15,7:20:46:440,46,0	0/1:20,2:21:9.17:120,0,9	1/1:7,3:10:23.47:220,23,0
chr10	37213344	.	AAC	A	1841.61	PASS	AB=0.929;AC=30;AF=0.536;AN=56;BaseQRankSum=7.839;DP=596;FS=0.796;HRun=0;HaplotypeScore=167.0015;InbreedingCoeff=0.2565;MQ=58.43;MQ0=29;MQRankSum=-4.763;QD=4.51;ReadPosRankSum=-0.851;VQSLOD=2.9769;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:33,0:32:52.60:229,53,0	0/0:5,0:5:10.56:0,11,75	0/0:78,0:28:36.78:0,37,505	0/1:69,0:12:14.78:28,0,15	0/0:13,0:12:33.11:0,33,610	1/1:21,0:21:38.36:174,38,0	1/1:15,0:15:8.81:92,9,0	0/1:25,2:26:99:116,0,166	0/0:20,0:20:54.14:0,54,957	1/1:25,0:23:53.28:275,53,0	1/1:12,0:11:23.84:108,24,0	0/1:11,0:11:0.89:108,0,1	0/1:11,1:12:29.58:30,0,123	0/1:9,3:12:53.34:53,0,112	0/1:18,0:18:1.31:142,0,1	0/0:17,0:16:51.16:0,51,914	0/0:25,0:25:75.14:0,75,1188	1/1:12,0:12:6.12:70,6,0	0/1:30,2:31:66.55:67,0,352	0/1:18,3:20:94.54:95,0,207	0/1:10,2:11:49.38:49,0,131	0/0:15,0:15:13.94:0,14,84	1/1:11,0:10:4.86:58,5,0	1/1:12,0:11:8.55:56,9,0	0/0:13,0:13:24.36:0,24,176	1/1:17,0:16:11.90:129,12,0	0/1:25,1:25:54.79:55,0,236	1/1:10,0:10:1.75:98,2,0
chr10	37213347	.	CCA	C	5130.12	PASS	AB=0.989;AC=19;AF=0.339;AN=56;BaseQRankSum=5.053;DP=592;FS=9.551;HRun=0;HaplotypeScore=154.4461;InbreedingCoeff=0.5764;MQ=61.46;MQ0=26;MQRankSum=-9.242;QD=19.88;ReadPosRankSum=0.780;VQSLOD=5.0130;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,29:31:63.21:1012,63,0	0/0:5,0:5:12.95:0,13,122	0/0:85,0:32:47:0,47,681	0/1:67,0:14:10.69:11,0,166	0/0:12,0:12:33.11:0,33,667	1/1:2,19:21:48.16:754,48,0	1/1:1,14:15:39.01:561,39,0	0/0:26,0:25:25.41:0,25,573	0/0:18,0:18:51.17:0,51,1004	1/1:5,23:26:75.13:1042,75,0	1/1:1,11:11:27.09:425,27,0	0/1:10,0:10:33.74:34,0,93	0/0:11,0:12:9.96:0,10,299	0/0:11,0:11:26.29:0,26,257	1/1:1,17:18:30.19:693,30,0	0/0:17,0:16:51.17:0,51,1001	0/0:26,0:26:78.11:0,78,1402	1/1:0,12:12:30.10:484,30,0	0/0:31,0:30:52.91:0,53,708	0/0:20,0:19:30.92:0,31,460	0/0:10,0:9:26.08:0,26,281	0/0:14,0:14:31.75:0,32,285	0/1:10,0:9:24.88:25,0,26	0/1:14,0:13:16.83:17,0,40	0/0:11,0:11:26.31:0,26,322	0/1:17,1:17:72:72,0,92	0/0:26,0:26:68.14:0,68,764	0/0:10,0:10:3.36:0,3,102
chr10	37213364	.	C	CA	4070.77	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-1.684;DP=552;FS=0.000;HRun=6;HaplotypeScore=134.9151;InbreedingCoeff=0.9812;MQ=73.46;MQ0=10;MQRankSum=-0.003;QD=22.87;ReadPosRankSum=-0.817;VQSLOD=1.6173;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:51.11:0,51,518	1/1:2,3:5:9.03:113,9,0	0/0:59,0:34:58.52:0,59,522	0/0:40,0:15:22.13:0,22,223	0/0:15,0:15:36.06:0,36,360	0/0:22,0:22:29.36:0,29,400	0/0:15,0:15:30.06:0,30,304	1/1:10,16:26:45.11:537,45,0	0/0:21,0:21:54.12:0,54,551	0/0:28,0:28:71.87:0,72,690	0/0:10,0:10:23.27:0,23,220	0/0:11,0:11:33.01:0,33,316	1/1:3,13:16:27.56:340,28,0	1/1:2,10:12:24.08:302,24,0	0/0:19,0:19:39.09:0,39,397	0/0:13,0:13:39.09:0,39,398	0/0:25,0:25:66.14:0,66,673	0/0:12,0:12:18.04:0,18,183	1/1:7,16:22:51.13:624,51,0	1/1:5,16:20:48.10:573,48,0	1/1:5,6:10:21.07:262,21,0	1/1:7,10:17:24.03:278,24,0	0/0:13,0:12:24.02:0,24,231	0/0:15,0:14:11.63:0,12,116	1/1:3,11:14:21.07:264,21,0	0/0:15,0:15:42.09:0,42,428	1/1:7,26:33:66.08:777,66,0	0/0:8,0:8:21.05:0,21,214
chr10	37214696	.	CAT	C	2979.38	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=10.099;DP=727;FS=2.816;HRun=0;HaplotypeScore=84.8318;InbreedingCoeff=0.9991;MQ=89.25;MQ0=0;MQRankSum=-2.152;QD=42.56;ReadPosRankSum=2.436;VQSLOD=5.6117;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,108,2084	0/0:10,0:10:30.08:0,30,525	0/0:30,0:30:81.26:0,81,1501	0/0:25,0:25:69.23:0,69,1274	0/0:28,0:28:81.23:0,81,1505	0/0:23,0:23:69.24:0,69,1332	0/0:21,0:21:60.19:0,60,1125	0/0:36,0:36:99:0,105,1984	0/0:17,0:17:48.16:0,48,926	0/0:44,0:44:99:0,132,2516	0/0:24,0:24:63.18:0,63,1149	1/1:0,25:25:75.25:1147,75,0	0/0:37,0:37:99:0,111,2110	0/0:17,0:17:51.16:0,51,929	0/0:39,0:39:99:0,117,2258	0/0:28,0:28:81.24:0,81,1464	0/0:28,0:28:81.28:0,81,1553	0/0:23,0:23:69.24:0,69,1317	0/0:29,0:29:87.30:0,87,1681	0/0:15,0:15:45.15:0,45,866	0/0:31,0:31:87.28:0,87,1646	0/0:22,0:22:63.19:0,63,1137	1/1:0,18:18:51.17:781,51,0	1/1:0,27:27:78.26:1194,78,0	0/0:22,0:22:66.23:0,66,1273	0/0:31,0:31:93.30:0,93,1734	0/0:31,0:30:90.29:0,90,1702	0/0:8,0:8:24.08:0,24,453
chr10	37216338	.	A	AATT	887.99	PASS	AC=10;AF=0.238;AN=42;BaseQRankSum=-4.742;DP=142;FS=0.000;HRun=0;HaplotypeScore=19.1392;InbreedingCoeff=0.5872;MQ=69.86;MQ0=0;MQRankSum=-0.707;QD=29.60;ReadPosRankSum=1.812;VQSLOD=2.9915;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,10:12:15.05:305,15,0	./.	0/0:10,0:5:1.55:0,2,4	./.	0/0:3,0:3:3.01:0,3,43	1/1:0,2:2:6.02:122,6,0	./.	0/0:20,0:20:33.09:0,33,420	0/0:5,0:5:12.04:0,12,172	1/1:2,1:3:3.01:61,3,0	./.	0/0:4,0:4:6.02:0,6,86	0/0:2,0:2:6.02:0,6,86	0/0:3,0:3:6.02:0,6,78	1/1:3,0:3:6.02:108,6,0	0/0:4,0:4:3.01:0,3,43	0/0:15,0:15:33.11:0,33,468	1/1:3,7:10:21.07:427,21,0	0/0:14,0:14:24.07:0,24,323	./.	./.	0/0:2,0:2:3.01:0,3,37	0/0:1,0:1:3.01:0,3,43	./.	0/0:9,0:9:12.03:0,12,155	0/0:2,0:2:6.02:0,6,86	0/0:4,0:4:6.02:0,6,86	0/0:6,0:6:12.04:0,12,168
chr10	37216988	.	A	ATTTTGATCATCCG	8403.99	PASS	AB=0.641;AC=26;AF=0.591;AN=44;BaseQRankSum=-6.694;DP=273;DS;FS=147.808;HRun=0;HaplotypeScore=66.1972;InbreedingCoeff=0.6342;MQ=38.96;MQ0=45;MQRankSum=-8.021;QD=72.45;ReadPosRankSum=-0.206;VQSLOD=1.9762;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,3:7:12.04:622,12,0	./.	0/0:12,0:7:18.06:0,18,715	0/0:13,0:6:15.05:0,15,502	0/0:25,0:25:63.15:0,63,2233	1/1:10,0:3:6.02:281,6,0	0/1:3,2:6:99:391,0,101	1/1:7,1:6:17.97:420,18,0	0/0:30,0:28:75.24:0,75,2711	1/1:3,2:2:6.02:400,6,0	./.	1/1:7,3:8:12.04:733,12,0	1/1:4,4:7:15.05:994,15,0	1/1:7,4:10:21.07:1266,21,0	1/1:1,4:6:15.05:837,15,0	0/0:24,0:21:54.12:0,54,1887	0/0:28,0:23:54.19:0,54,2108	0/0:4,0:2:3.01:0,3,85	1/1:6,4:4:12.03:626,12,0	./.	1/1:0,1:3:3.01:185,3,0	0/0:8,0:4:3.01:0,3,61	./.	0/1:3,1:6:73.70:192,0,74	./.	1/1:2,5:7:18.06:1057,18,0	1/1:4,2:4:6.02:400,6,0	./.
chr10	37217649	.	AT	A	1708.82	PASS	AB=0.621;AC=19;AF=0.339;AN=56;BaseQRankSum=4.373;DP=506;FS=0.481;HRun=10;HaplotypeScore=50.8294;InbreedingCoeff=0.8526;MQ=50.46;MQ0=39;MQRankSum=-4.464;QD=12.03;ReadPosRankSum=-1.155;VQSLOD=2.5859;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:30:75.20:0,75,828	1/1:1,10:9:26.99:234,27,0	0/0:19,0:10:22.29:0,22,218	0/0:20,0:6:17.92:0,18,157	0/0:31,0:26:60.08:0,60,636	0/0:16,0:15:33.05:0,33,351	0/0:10,0:8:24.02:0,24,251	1/1:9,10:14:32.96:282,33,0	0/0:18,0:17:45.12:0,45,496	0/0:19,0:15:45.12:0,45,497	0/0:29,0:18:39.07:0,39,419	0/0:14,1:13:7.47:0,7,306	1/1:3,7:8:18:156,18,0	1/1:1,11:10:1.10:136,1,0	0/0:19,0:15:35.98:0,36,397	0/0:17,0:16:48.13:0,48,531	0/0:29,0:25:69.17:0,69,754	0/0:17,0:15:39.11:0,39,431	1/1:6,7:8:17.99:156,18,0	0/1:7,11:9:12.25:135,0,12	1/1:4,14:16:35.03:292,35,0	1/1:3,9:7:6:52,6,0	0/0:16,0:16:38.91:0,39,399	0/0:18,0:17:39.11:0,39,430	1/1:2,16:16:38.99:338,39,0	0/0:21,0:18:51.14:0,51,563	1/1:3,7:7:15:130,15,0	0/0:14,0:13:27.07:0,27,299
chr10	37217767	.	A	AT	3078.84	PASS	AB=0.712;AC=35;AF=0.625;AN=56;BaseQRankSum=-4.235;DP=404;FS=0.561;HRun=10;HaplotypeScore=34.6046;InbreedingCoeff=0.2432;MQ=52.02;MQ0=24;MQRankSum=-0.442;QD=10.03;ReadPosRankSum=0.786;VQSLOD=1.3270;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:8,25:34:22.61:379,0,23	1/1:1,6:8:18.76:176,19,0	0/0:20,0:7:12.23:0,12,87	0/0:16,0:9:4.78:0,5,28	0/0:24,0:22:35.96:0,36,295	1/1:7,8:10:9.02:96,9,0	0/1:6,3:6:12.60:84,0,13	1/1:14,8:15:2.34:200,2,0	0/0:12,0:10:14.98:0,15,123	0/1:8,8:14:3.76:153,0,4	0/1:2,4:8:12.77:66,0,13	1/1:1,7:8:18.05:192,18,0	1/1:5,4:9:11.99:115,12,0	1/1:2,3:4:9.02:94,9,0	1/1:3,11:12:18.04:190,18,0	0/1:9,1:8:13.99:14,0,105	0/0:21,0:19:23.94:0,24,197	1/1:0,4:4:12.03:128,12,0	0/1:10,5:11:68.40:144,0,68	1/1:10,8:13:27.04:277,27,0	1/1:8,12:17:5.44:263,5,0	0/1:6,7:12:3.58:171,0,4	1/1:4,3:6:6.02:64,6,0	1/1:5,10:11:17.72:171,18,0	1/1:4,6:10:12.03:128,12,0	0/1:23,2:22:16.04:16,0,296	0/1:9,10:15:28.21:139,0,28	0/0:3,0:4:8.03:0,8,55
chr10	37220514	.	TA	T	2063.39	PASS	AC=18;AF=0.333;AN=54;BaseQRankSum=4.542;DP=332;FS=23.665;HRun=9;HaplotypeScore=44.4001;InbreedingCoeff=0.8734;MQ=83.67;MQ0=3;MQRankSum=0.926;QD=19.84;ReadPosRankSum=-1.142;VQSLOD=1.8904;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:48.13:0,48,545	1/1:0,9:9:27.01:247,27,0	0/0:48,0:17:20.40:0,20,188	0/0:36,2:18:5.91:0,6,56	0/0:17,0:17:45.11:0,45,498	0/0:14,0:14:33.10:0,33,381	0/0:4,0:4:6.02:0,6,69	1/1:3,25:28:69.01:628,69,0	0/0:5,0:5:14.41:0,14,146	0/0:5,0:5:12.04:0,12,139	0/0:9,0:9:24.07:0,24,277	0/0:1,0:1:3.01:0,3,35	1/1:0,4:4:9:82,9,0	1/1:2,4:6:15.01:137,15,0	0/0:7,0:7:18.05:0,18,208	0/0:5,0:5:12.02:0,12,127	0/0:12,0:12:33.10:0,33,381	0/0:11,0:11:21.02:0,21,227	1/1:5,10:14:30:274,30,0	1/1:0,11:11:29.94:265,30,0	1/1:1,2:2:6:55,6,0	./.	0/0:2,0:2:6.02:0,6,69	0/0:4,0:4:12.04:0,12,138	1/1:4,10:14:24:220,24,0	0/0:8,0:8:18.05:0,18,208	1/1:1,13:14:39.02:357,39,0	0/0:17,0:17:42.08:0,42,462
chr10	37220589	.	TTA	T	2904.23	PASS	AB=0.929;AC=20;AF=0.370;AN=54;BaseQRankSum=-0.806;DP=344;FS=6.585;HRun=0;HaplotypeScore=86.1586;InbreedingCoeff=0.7343;MQ=69.51;MQ0=4;MQRankSum=-0.262;QD=18.38;ReadPosRankSum=-2.975;VQSLOD=2.2426;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:25:56.91:0,57,538	1/1:4,5:9:11.99:130,12,0	0/1:13,0:9:1.02:1,0,2	0/0:22,0:8:8.37:0,8,112	0/0:19,1:20:7.60:0,8,611	0/0:7,0:21:31.20:0,31,274	0/0:0,0:1:3:0,3,26	1/1:11,22:33:66.21:823,66,0	0/0:5,0:5:12.04:0,12,196	0/0:6,0:7:20.62:0,21,224	0/0:7,0:15:32.98:0,33,298	0/0:1,0:1:2.98:0,3,22	1/1:1,3:3:6.02:75,6,0	1/1:2,9:11:10.15:215,10,0	0/0:6,0:8:7.82:0,8,55	0/1:5,1:6:22.48:22,0,182	0/0:20,0:20:45.15:0,45,726	0/0:2,0:9:16.81:0,17,135	1/1:12,13:23:48.14:584,48,0	1/1:7,6:13:21.03:246,21,0	1/1:1,4:4:6.02:75,6,0	./.	0/0:6,0:6:15.05:0,15,248	0/0:3,0:3:6.02:0,6,99	1/1:6,9:14:24.01:258,24,0	0/0:6,0:7:16.57:0,17,116	1/1:4,19:24:56.97:669,57,0	0/0:14,0:14:23.40:0,23,158
chr10	37220608	.	T	TGC	586.11	PASS	AB=0.808;AC=4;AF=0.071;AN=56;BaseQRankSum=3.665;DP=353;FS=2.669;HRun=0;HaplotypeScore=99.3042;InbreedingCoeff=0.3332;MQ=61.80;MQ0=13;MQRankSum=-0.993;QD=10.47;ReadPosRankSum=0.946;VQSLOD=3.0214;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:32.80:0,33,570	0/0:5,0:5:9.03:0,9,113	0/0:15,0:5:3.01:0,3,36	0/1:37,0:12:5.51:6,0,205	0/0:16,0:16:42.14:0,42,674	0/0:19,0:19:23.51:0,24,311	0/0:1,0:1:3.01:0,3,47	0/0:37,0:37:91.21:0,91,1301	0/0:7,0:7:21.06:0,21,319	0/0:12,0:11:18.38:0,18,253	0/0:15,0:15:28.13:0,28,397	0/0:1,0:1:3.01:0,3,49	0/0:4,0:3:6.02:0,6,95	0/0:10,0:10:24.55:0,25,350	0/0:7,0:6:10.18:0,10,69	0/0:5,0:5:15.05:0,15,242	0/0:20,0:20:48.16:0,48,783	0/0:10,0:9:10.57:0,11,190	0/0:21,0:18:54.16:0,54,721	0/0:6,0:6:12.04:0,12,160	0/0:8,0:6:15.05:0,15,215	0/0:1,0:1:0:0,0,0	0/0:7,0:7:21.07:0,21,345	0/0:6,0:6:18.02:0,18,263	0/0:10,0:9:15.05:0,15,223	0/1:3,4:8:26.27:291,0,26	0/0:28,0:28:56.12:0,56,808	1/1:3,8:10:24.05:397,24,0
chr10	37220613	.	ATATG	A	5360.81	PASS	AB=1.000;AC=31;AF=0.620;AN=50;BaseQRankSum=0.928;DP=364;FS=0.598;HRun=0;HaplotypeScore=94.2104;InbreedingCoeff=0.8187;MQ=59.95;MQ0=14;MQRankSum=-0.990;QD=23.62;ReadPosRankSum=1.017;VQSLOD=4.6314;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:20,11:31:56.85:745,57,0	1/1:1,4:5:9.02:123,9,0	./.	0/0:39,0:11:11.93:0,12,95	0/0:17,0:17:30.06:0,30,582	1/1:10,9:19:33.56:485,34,0	./.	1/1:16,19:35:33.26:769,33,0	0/0:7,0:7:18.06:0,18,386	1/1:5,7:11:24.05:337,24,0	1/1:8,5:13:18.05:270,18,0	0/0:2,0:2:5.97:0,6,46	1/1:4,0:3:6.01:69,6,0	1/1:6,3:9:18.51:244,19,0	1/1:1,6:6:15.05:238,15,0	0/0:5,0:5:6.02:0,6,144	0/0:22,0:22:36.06:0,36,641	1/1:6,4:9:23.91:277,24,0	1/1:12,7:16:36.10:541,36,0	1/1:5,2:7:11.97:140,12,0	1/1:7,2:6:12.04:193,12,0	./.	0/1:9,0:9:75.75:95,0,76	0/0:8,0:8:17.96:0,18,149	1/1:7,4:10:9.02:122,9,0	0/0:8,0:8:17.58:0,18,104	1/1:13,14:27:48.13:713,48,0	0/0:12,0:11:17.68:0,18,112
chr10	37220637	.	GTA	G	332.15	PASS	AB=0.895;AC=8;AF=0.143;AN=56;BaseQRankSum=11.271;DP=392;FS=0.000;HRun=0;HaplotypeScore=95.5073;InbreedingCoeff=0.2082;MQ=51.16;MQ0=14;MQRankSum=-4.272;QD=4.96;ReadPosRankSum=8.286;VQSLOD=1.6613;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:13.43:0,13,279	1/1:5,0:5:2.80:7,3,0	0/0:16,0:3:3.01:0,3,45	0/0:39,0:9:9.02:0,9,118	0/0:19,0:19:45.15:0,45,740	0/0:23,0:22:4.75:0,5,247	0/0:1,0:1:3.01:0,3,45	0/0:40,0:39:66.21:0,66,838	0/0:13,0:13:36.11:0,36,555	0/0:9,0:9:1.66:0,2,74	0/0:12,0:12:5.05:0,5,135	0/0:3,0:3:9.02:0,9,97	0/0:4,0:4:6.91:0,7,92	0/0:8,0:8:1.38:0,1,43	0/0:12,0:11:9.21:0,9,216	0/0:5,0:5:15.05:0,15,243	0/0:21,0:21:47.89:0,48,737	0/1:12,0:11:1.91:2,0,79	0/0:20,0:19:4.86:0,5,275	0/0:10,0:10:18.51:0,19,220	0/1:10,0:7:2.95:3,0,39	0/0:6,0:6:15.02:0,15,198	0/0:10,0:10:18.36:0,18,197	0/0:13,0:13:39.07:0,39,411	0/0:11,0:10:12.79:0,13,195	0/1:3,8:9:16.75:271,0,17	0/1:24,0:24:0.54:1,0,148	1/1:1,4:5:12.04:156,12,0
chr10	37222832	.	ATCT	A	1012.58	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.685;DP=607;FS=6.613;HRun=0;HaplotypeScore=82.8106;InbreedingCoeff=0.9462;MQ=78.55;MQ0=0;MQRankSum=-3.210;QD=38.95;ReadPosRankSum=0.181;VQSLOD=4.2404;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,129,2635	0/0:2,0:2:6.02:0,6,130	0/0:26,0:26:57.17:0,57,1109	0/0:22,0:22:57.02:0,57,1072	0/0:26,0:26:69.24:0,69,1505	0/0:29,0:29:84.27:0,84,1786	0/0:22,0:22:60.21:0,60,1311	0/0:29,0:29:72.25:0,72,1562	0/0:22,0:22:63.20:0,63,1336	0/0:29,0:29:84.29:0,84,1826	0/0:19,0:19:57.20:0,57,1220	0/0:20,0:20:57.20:0,57,1221	0/0:10,0:10:24.08:0,24,525	0/0:12,0:12:36.12:0,36,787	0/0:22,0:22:63.22:0,63,1376	0/0:33,0:33:96.32:0,96,2050	0/0:32,0:32:93.32:0,93,2006	0/0:24,0:24:69.24:0,69,1479	0/0:16,0:16:30.10:0,30,640	0/0:20,0:20:57.20:0,57,1232	0/0:23,0:23:66.23:0,66,1431	0/0:17,0:17:48.16:0,48,1027	0/0:19,0:19:51.16:0,51,1073	0/0:20,0:20:57.20:0,57,1230	0/0:14,0:14:42.14:0,42,918	1/1:2,16:18:48.16:754,48,0	0/0:29,0:28:81.26:0,81,1678	1/1:0,8:8:24.08:380,24,0
chr10	37223194	.	CCAGCAAACTG	C	1815.07	PASS	AB=0.545;AC=3;AF=0.054;AN=56;BaseQRankSum=7.428;DP=616;FS=4.214;HRun=0;HaplotypeScore=185.6917;InbreedingCoeff=0.6327;MQ=76.56;MQ0=0;MQRankSum=-6.563;QD=78.92;ReadPosRankSum=1.445;VQSLOD=3.7587;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:87.30:0,87,4567	0/0:11,0:11:33.11:0,33,1812	0/0:21,0:19:25.14:0,25,1972	0/0:17,0:16:41.77:0,42,1929	0/0:25,0:25:72.25:0,72,3684	0/0:21,0:21:63.22:0,63,3262	0/0:21,0:21:63.22:0,63,3367	0/0:21,0:21:63.22:0,63,3326	0/0:27,0:27:78.27:0,78,4054	0/0:28,0:28:81.28:0,81,4294	0/0:16,0:16:48.16:0,48,2483	0/0:16,0:16:48.16:0,48,2471	0/0:18,0:18:54.17:0,54,2733	0/0:19,0:19:57.16:0,57,2875	0/0:28,0:28:78.27:0,78,4244	0/0:35,0:35:99:0,105,5439	0/0:36,0:36:99:0,105,5382	0/0:28,0:28:84.29:0,84,4474	0/0:24,0:24:68.97:0,69,3599	0/0:22,0:22:66.23:0,66,3356	0/0:20,0:20:60.21:0,60,3244	0/0:24,0:24:72.23:0,72,3716	0/0:21,0:21:63.22:0,63,3183	0/0:26,0:26:78.25:0,78,4033	0/0:12,0:12:36.12:0,36,1874	0/1:3,15:18:99:1474,0,441	0/0:26,0:26:78.25:0,78,3918	1/1:2,3:5:15.05:443,15,0
chr10	37223208	.	TC	T	622.34	PASS	AB=0.559;AC=3;AF=0.054;AN=56;BaseQRankSum=7.695;DP=626;FS=5.666;HRun=1;HaplotypeScore=73.1069;InbreedingCoeff=0.6197;MQ=74.75;MQ0=0;MQRankSum=-6.193;QD=27.06;ReadPosRankSum=1.792;VQSLOD=3.4115;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:96.33:0,96,1530	0/0:11,0:11:33.11:0,33,527	0/0:15,0:15:39.13:0,39,610	0/0:15,0:15:32.75:0,33,479	0/0:32,0:32:96.31:0,96,1503	0/0:19,0:19:57.16:0,57,863	0/0:26,0:26:75.22:0,75,1170	0/0:25,0:25:75.25:0,75,1176	0/0:26,0:26:78.27:0,78,1246	0/0:28,0:28:84.29:0,84,1343	0/0:15,0:15:45.15:0,45,717	0/0:18,0:18:54.17:0,54,840	0/0:16,0:16:48.16:0,48,767	0/0:19,0:19:54.18:0,54,857	0/0:34,0:34:99:0,99,1581	0/0:34,0:34:99:0,99,1583	0/0:32,0:32:93.32:0,93,1486	0/0:30,0:30:90.31:0,90,1421	0/0:26,0:26:74.94:0,75,1149	0/0:19,0:19:57.18:0,57,888	0/0:24,0:24:60.19:0,60,935	0/0:22,0:22:66.23:0,66,1055	0/0:18,0:18:54.18:0,54,863	0/0:30,0:30:87.30:0,87,1390	0/0:13,0:13:36.12:0,36,576	0/1:4,15:19:38.82:577,0,39	0/0:22,0:22:66.21:0,66,1031	1/1:1,3:4:12.04:145,12,0
chr10	37223863	.	CT	C	1595.21	PASS	AB=0.717;AC=13;AF=0.232;AN=56;BaseQRankSum=-5.916;DP=530;FS=5.630;HRun=13;HaplotypeScore=76.2024;InbreedingCoeff=0.6896;MQ=68.84;MQ0=11;MQRankSum=1.485;QD=9.38;ReadPosRankSum=2.092;VQSLOD=3.1420;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:14,28:41:59.22:382,0,59	0/0:2,0:16:37.09:0,37,198	0/0:19,0:14:10.95:0,11,125	0/0:17,0:12:14.54:0,15,92	0/0:27,1:29:40.99:0,41,532	0/1:7,14:21:18.80:145,0,19	1/1:3,11:13:32.79:241,33,0	0/0:21,0:28:40.44:0,40,250	0/0:17,0:16:38.98:0,39,357	1/1:6,18:24:50.67:370,51,0	1/1:1,13:14:32.81:240,33,0	0/0:17,1:18:9.59:0,10,123	0/0:3,0:12:19.92:0,20,99	0/0:7,0:20:17.21:0,17,100	1/1:4,9:13:17.84:131,18,0	0/0:13,0:14:29.88:0,30,277	0/0:27,2:28:25.30:0,25,566	1/1:5,18:22:35.76:262,36,0	0/0:4,0:20:46.72:0,47,251	0/0:5,0:11:21.13:0,21,118	0/0:3,0:8:17.32:0,17,109	0/0:4,0:16:25.91:0,26,143	0/1:18,1:19:4.80:5,0,120	0/0:10,0:8:14.20:0,14,72	0/0:5,0:13:28.57:0,29,157	0/0:5,1:26:16.53:0,17,143	0/0:5,0:14:22.89:0,23,129	0/0:6,0:14:15.60:0,16,75
chr10	37223876	.	T	TC	898.79	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=-1.309;DP=514;FS=0.608;HRun=1;HaplotypeScore=73.3506;InbreedingCoeff=0.4931;MQ=59.13;MQ0=21;MQRankSum=1.155;QD=7.31;ReadPosRankSum=3.617;VQSLOD=0.8429;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:46:99:0,105,724	0/1:18,0:18:12.71:13,0,80	0/0:12,0:9:22.32:0,22,150	0/0:9,0:6:5.30:0,5,51	0/0:29,0:27:73.31:0,73,798	0/0:19,0:19:32.44:0,32,218	0/0:15,0:14:35.34:0,35,221	0/0:31,0:26:42.01:0,42,382	0/0:12,0:11:33.02:0,33,373	0/0:19,0:19:52.80:0,53,324	0/0:17,0:17:38.05:0,38,234	1/1:2,13:15:33.06:403,33,0	0/1:12,0:12:1.87:2,0,13	0/1:15,0:15:8.56:9,0,42	0/0:12,0:12:20.61:0,21,133	0/0:12,0:12:29.63:0,30,334	0/0:30,0:29:80.96:0,81,881	0/0:25,0:22:41.21:0,41,255	0/1:17,0:17:0.49:0,0,78	0/0:16,0:14:16.37:0,16,163	0/0:11,0:10:4.99:0,5,93	0/0:16,0:16:10.30:0,10,102	1/1:1,15:19:38.73:428,39,0	1/1:2,11:11:15.05:191,15,0	0/0:17,0:15:9.65:0,10,131	0/0:23,0:23:52.65:0,53,321	0/1:14,0:13:0.83:1,0,67	0/0:16,0:14:14.99:0,15,81
chr10	37224283	.	ACTCTCTCTCTCTCTCTCTCTCTCGCG	A	1232.45	PASS	AC=10;AF=0.200;AN=50;BaseQRankSum=3.580;DP=361;FS=2.978;HRun=0;HaplotypeScore=231.4968;InbreedingCoeff=0.8007;MQ=62.22;MQ0=8;MQRankSum=-3.331;QD=28.66;ReadPosRankSum=-2.541;VQSLOD=2.4981;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:4,0:6:12.04:0,12,862	0/0:22,0:14:39.05:0,39,1891	0/0:24,0:21:60.14:0,60,4086	0/0:11,0:11:30.10:0,30,2760	1/1:6,3:9:12.04:502,12,0	./.	0/0:12,0:13:39.13:0,39,1981	0/0:16,0:16:48.16:0,48,4473	1/1:3,8:11:13.46:738,13,0	1/1:3,8:11:0.89:2,1,0	0/0:2,0:11:18.06:0,18,639	0/0:3,0:7:18.53:0,19,1456	0/0:12,0:16:27.09:0,27,1593	./.	0/0:16,0:16:45.15:0,45,4645	0/0:31,0:35:95.91:0,96,9270	1/1:2,0:2:3.01:113,3,0	0/0:6,0:7:21.06:0,21,1309	0/0:6,0:8:21.07:0,21,1508	0/0:20,0:23:27.09:0,27,1690	0/0:10,0:13:30.09:0,30,1819	0/0:4,0:10:7.84:0,8,251	1/1:5,0:10:1.41:3,1,0	0/0:9,0:11:18.06:0,18,1395	0/0:4,0:13:39.13:0,39,1400	0/0:7,0:8:24.07:0,24,1577	0/0:3,0:7:21.07:0,21,744
chr10	37224346	.	CAT	C	679.24	PASS	AB=1.000;AC=30;AF=0.625;AN=48;BaseQRankSum=6.241;DP=358;FS=4.526;HRun=0;HaplotypeScore=95.3786;InbreedingCoeff=0.4513;MQ=37.79;MQ0=16;MQRankSum=-5.774;QD=3.01;ReadPosRankSum=-1.041;VQSLOD=1.2245;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:17,7:23:2.68:21,3,0	1/1:6,0:5:2.96:19,3,0	./.	0/0:2,0:1:2.90:0,3,16	0/0:10,0:10:26.96:0,27,351	1/1:4,4:8:2.96:28,3,0	1/1:20,0:19:8.42:46,8,0	0/1:14,0:11:3.61:64,0,4	0/0:18,0:18:34.29:0,34,508	1/1:13,2:13:28.78:191,29,0	0/0:4,2:6:0:0,0,0	1/1:16,0:14:1.39:7,1,0	1/1:11,0:11:8.96:44,9,0	1/1:20,0:20:17.05:87,17,0	1/1:4,4:8:2.94:18,3,0	0/0:11,0:11:7.51:0,8,450	0/0:28,0:28:35.98:0,36,835	1/1:1,6:7:5.95:56,6,0	1/1:12,0:8:13.75:86,14,0	./.	./.	0/0:10,0:10:2.80:0,3,13	./.	0/1:21,0:21:0:0,0,0	1/1:13,0:12:8.16:38,8,0	0/1:18,0:15:19.09:19,0,37	1/1:6,0:6:9.51:60,10,0	0/1:7,0:7:0.70:43,0,1
chr10	37224347	.	ATG	A	876.77	PASS	AB=0.894;AC=25;AF=0.521;AN=48;BaseQRankSum=4.814;DP=356;FS=24.851;HRun=0;HaplotypeScore=94.0284;InbreedingCoeff=0.2849;MQ=38.39;MQ0=16;MQRankSum=-5.932;QD=4.24;ReadPosRankSum=-2.549;VQSLOD=0.3588;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:19,4:22:2.71:45,3,0	0/0:5,1:6:1.46:0,1,18	./.	0/0:1,1:1:2.60:0,3,10	0/0:10,0:10:21.07:0,21,369	1/1:6,3:9:5.80:48,6,0	1/1:15,5:19:8.59:77,9,0	1/1:13,0:11:1.34:83,1,0	0/0:17,0:17:47.44:0,47,735	1/1:13,2:13:20.41:165,20,0	0/0:5,1:6:0:0,0,0	0/1:16,0:14:5.02:5,0,30	0/1:6,5:11:6.34:57,0,6	0/0:17,3:20:4.11:0,4,27	1/1:4,4:8:3.01:36,3,0	0/0:12,0:12:30.57:0,31,558	0/0:29,0:29:14.90:0,15,972	1/1:6,1:7:5.97:58,6,0	0/1:10,3:9:19.70:114,0,20	./.	./.	./.	0/1:5,0:5:0:0,0,0	0/1:22,0:22:0.34:0,0,0	1/1:12,1:12:4.87:42,5,0	0/1:16,2:15:16.43:127,0,16	0/1:5,1:6:12.93:80,0,13	1/1:8,0:7:10.21:83,10,0
chr10	37224348	.	TGCACGCAC	T	799.55	PASS	AB=0.969;AC=25;AF=0.543;AN=46;BaseQRankSum=2.885;DP=355;FS=6.664;HRun=0;HaplotypeScore=114.4574;InbreedingCoeff=0.1703;MQ=38.43;MQ0=15;MQRankSum=0.528;QD=3.79;ReadPosRankSum=-5.037;VQSLOD=-0.2888;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:22:2.76:45,3,0	1/1:6,0:6:5.93:60,6,0	./.	0/0:2,0:1:2.88:0,3,15	0/0:8,0:8:12.04:0,12,428	1/1:9,0:9:3.01:37,3,0	1/1:20,0:19:5.69:67,6,0	0/1:12,0:11:6.36:71,0,6	0/0:16,0:16:33.11:0,33,1140	0/1:15,0:13:29.02:56,0,29	0/1:6,0:6:0:0,0,0	1/1:16,0:14:3.48:75,3,0	0/0:11,0:11:8.96:0,9,88	0/1:20,0:20:33.30:136,0,33	1/1:9,0:9:5.50:46,6,0	0/0:12,0:12:18.06:0,18,692	0/0:30,0:30:42.08:0,42,1267	1/1:7,0:7:3.01:40,3,0	0/0:13,0:9:0.35:0,0,111	./.	./.	./.	./.	1/1:23,0:23:5.86:79,6,0	1/1:13,0:12:3.01:34,3,0	0/1:13,5:15:13.82:87,0,14	0/1:6,0:6:89.22:98,0,89	0/1:8,0:7:13.64:14,0,14
chr10	37224349	.	GCACGCACGCA	G	726.81	PASS	AB=0.978;AC=17;AF=0.370;AN=46;BaseQRankSum=-0.188;DP=360;FS=0.000;HRun=0;HaplotypeScore=121.5606;InbreedingCoeff=-0.0141;MQ=38.43;MQ0=15;MQRankSum=-3.825;QD=4.28;ReadPosRankSum=-1.631;VQSLOD=1.7234;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:22,1:22:2.47:90,2,0	0/0:6,0:6:5.89:0,6,56	./.	0/0:3,0:1:3.01:0,3,62	0/0:8,0:8:21.07:0,21,708	0/1:8,1:9:10.75:76,0,11	1/1:21,0:20:8.65:155,9,0	0/1:12,0:11:48.62:49,0,137	0/0:16,0:16:45.15:0,45,1763	0/1:15,0:13:99:145,0,126	0/1:5,1:6:0:0,0,0	0/1:19,0:17:7.43:7,0,73	0/1:11,0:11:17.16:17,0,191	0/0:20,0:20:20.94:0,21,301	1/1:7,2:9:6.02:131,6,0	0/0:12,0:12:33.11:0,33,1171	0/0:32,0:32:80.76:0,81,2474	0/1:7,0:7:2.18:69,0,2	0/1:13,0:9:85.64:86,0,187	./.	./.	./.	./.	0/0:23,0:23:5.88:0,6,37	0/1:12,0:11:11.67:12,0,16	0/0:18,0:15:15.19:0,15,218	0/1:5,0:5:25.87:26,0,177	0/1:8,0:7:6.61:7,0,111
chr10	37224351	.	ACG	A	527.58	PASS	AB=0.917;AC=27;AF=0.540;AN=50;BaseQRankSum=6.722;DP=365;FS=0.737;HRun=0;HaplotypeScore=98.5158;InbreedingCoeff=0.0398;MQ=38.94;MQ0=15;MQRankSum=-3.350;QD=1.90;ReadPosRankSum=-0.422;VQSLOD=1.9332;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:24:2.68:22,3,0	1/1:6,0:6:0.67:13,1,0	./.	0/0:3,0:1:2.97:0,3,20	0/0:8,0:8:21.07:0,21,352	0/1:9,0:9:5.70:6,0,25	1/1:21,0:20:5.62:32,6,0	0/1:9,2:10:8.07:8,0,17	0/0:17,0:17:48.16:0,48,831	0/1:16,0:14:14.89:15,0,125	0/0:6,0:6:0:0,0,0	0/1:10,9:17:16.34:16,0,76	1/1:11,0:11:9.87:49,10,0	1/1:19,0:19:13.35:92,13,0	1/1:9,0:9:0.19:13,0,0	0/0:12,0:12:33.10:0,33,543	0/0:31,0:31:75.40:0,75,1275	0/1:7,0:7:12.97:13,0,19	0/1:12,0:9:10.86:11,0,61	./.	1/1:41,0:34:2.92:17,3,0	./.	0/1:6,0:5:0:0,0,0	1/1:15,8:23:5.41:47,5,0	0/1:11,0:11:2.36:2,0,22	0/1:17,1:15:37.86:116,0,38	0/1:5,0:5:32.26:82,0,32	0/1:3,5:7:4.16:118,0,4
chr10	37224353	.	GCA	G	107.92	PASS	AB=0.951;AC=13;AF=0.271;AN=48;BaseQRankSum=6.056;DP=357;FS=4.436;HRun=0;HaplotypeScore=96.7276;InbreedingCoeff=-0.0427;MQ=39.36;MQ0=15;MQRankSum=-4.321;QD=0.63;ReadPosRankSum=1.789;VQSLOD=1.7180;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:21:2.38:11,2,0	0/0:6,0:6:5.21:0,5,31	./.	0/0:3,0:1:3.01:0,3,42	0/0:8,0:8:21.05:0,21,340	0/0:8,0:8:3.01:0,3,42	0/1:21,0:20:0.24:0,0,1	0/0:11,0:10:26.44:0,26,178	0/0:17,0:17:48.16:0,48,846	0/0:16,0:14:21.41:0,21,239	0/0:7,0:7:2.98:0,3,21	0/1:19,0:17:0.09:0,0,76	0/1:9,2:11:2.79:54,0,3	0/1:16,3:19:0.22:0,0,39	0/1:9,0:9:2.21:2,0,20	0/0:11,0:11:30.10:0,30,518	0/0:29,0:29:72.40:0,72,1270	0/1:7,0:7:2.12:2,0,34	0/1:10,1:8:11.65:12,0,93	./.	0/0:42,0:36:0.47:0,0,1	./.	./.	0/1:23,0:23:3.26:3,0,29	0/0:12,0:11:8.22:0,8,66	0/1:15,0:12:54.90:55,0,66	0/1:4,1:5:18.67:19,0,44	0/1:8,0:7:16.01:63,0,16
chr10	37224356	.	C	CAT	1465.31	PASS	AB=0.830;AC=17;AF=0.340;AN=50;BaseQRankSum=1.310;DP=364;FS=0.722;HRun=0;HaplotypeScore=100.2151;InbreedingCoeff=0.1288;MQ=40.70;MQ0=15;MQRankSum=0.450;QD=7.63;ReadPosRankSum=-0.423;VQSLOD=3.3235;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:21:5.67:0,6,33	1/1:3,2:6:5.91:122,6,0	./.	0/0:3,0:1:3.01:0,3,46	0/0:10,0:10:24.05:0,24,341	0/0:9,0:9:2.33:0,2,58	0/0:21,0:20:8.89:0,9,71	0/1:11,0:10:95.53:96,0,218	0/0:17,0:17:48.15:0,48,745	0/0:16,0:14:27.09:0,27,326	0/0:4,0:4:2.83:0,3,19	0/1:19,2:19:60.49:60,0,75	0/1:7,4:11:0.69:116,0,1	1/1:7,13:20:20.83:424,21,0	0/0:9,0:9:5.80:0,6,31	0/0:13,0:13:33.06:0,33,485	0/0:28,0:28:78.21:0,78,1192	0/0:7,0:7:5.97:0,6,68	0/1:9,3:10:63.99:64,0,82	./.	1/1:26,16:37:5.50:43,6,0	./.	0/1:6,0:5:0:0,0,0	1/1:24,0:24:8.68:143,9,0	0/1:7,2:9:42.83:55,0,43	0/1:10,4:11:72.13:251,0,72	0/1:2,3:5:53.10:167,0,53	0/1:7,1:7:20.56:77,0,21
chr10	37224357	.	GCA	G	327.39	PASS	AB=0.861;AC=11;AF=0.212;AN=52;BaseQRankSum=1.826;DP=351;FS=0.000;HRun=0;HaplotypeScore=93.1984;InbreedingCoeff=0.1540;MQ=40.98;MQ0=15;MQRankSum=-0.803;QD=3.31;ReadPosRankSum=-1.968;VQSLOD=2.0210;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:17,4:20:8.69:106,9,0	0/0:6,0:6:6.02:0,6,68	./.	0/0:3,0:1:3.01:0,3,57	0/0:9,0:9:24.08:0,24,396	0/1:6,3:9:11.11:46,0,11	0/1:15,5:19:10.75:69,0,11	0/0:12,0:11:30.05:0,30,355	0/0:16,0:16:42.12:0,42,745	0/1:13,2:13:99:110,0,243	1/1:3,1:4:2.93:21,3,0	0/0:20,0:18:6.11:0,6,161	0/0:11,0:11:2.05:0,2,56	0/0:20,0:20:20.97:0,21,217	1/1:6,3:9:4.67:42,5,0	0/0:12,0:12:33.11:0,33,559	0/0:26,0:26:66.37:0,66,1188	0/1:6,1:7:33.76:45,0,34	0/0:12,0:9:15.25:0,15,144	./.	0/0:41,0:35:3.01:0,3,39	0/0:9,0:9:3.01:0,3,42	0/0:7,0:6:3:0,3,25	0/0:21,0:21:11.87:0,12,131	0/0:10,0:9:6.02:0,6,80	0/1:14,0:11:27.16:27,0,113	0/0:5,0:5:14.97:0,15,162	0/0:8,0:7:3.05:0,3,43
chr10	37226813	.	C	CTTTTTTTTTTT	19107.34	PASS	AB=1.000;AC=45;AF=0.804;AN=56;BaseQRankSum=7.345;DP=364;FS=12.910;HRun=10;HaplotypeScore=130.7281;InbreedingCoeff=0.7818;MQ=55.68;MQ0=6;MQRankSum=-11.314;QD=68.49;ReadPosRankSum=-3.283;VQSLOD=1.0584;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,5:12:27.09:1279,27,0	1/1:3,0:7:8.73:443,9,0	0/0:15,0:11:20.79:0,21,386	0/0:11,0:9:5.81:0,6,140	0/0:21,0:20:53.98:0,54,1302	1/1:17,0:17:30.10:1222,30,0	1/1:12,0:11:18.06:798,18,0	1/1:14,0:14:18.02:450,18,0	0/1:7,0:8:67.04:67,0,442	1/1:14,0:13:27.09:1042,27,0	1/1:13,0:13:18.06:820,18,0	1/1:8,0:7:12.04:376,12,0	1/1:9,0:8:21.06:849,21,0	1/1:9,0:9:21.07:887,21,0	1/1:9,0:8:21.07:831,21,0	0/0:8,0:9:23.96:0,24,611	0/0:28,0:29:81.18:0,81,2160	1/1:15,0:15:30.10:1367,30,0	1/1:19,0:18:33.09:962,33,0	1/1:13,7:21:33.11:1435,33,0	1/1:4,0:3:6.02:219,6,0	1/1:3,0:3:6.02:310,6,0	1/1:4,0:8:17.74:542,18,0	1/1:6,0:6:9.28:186,9,0	1/1:19,0:18:39.12:1544,39,0	1/1:11,0:18:42.14:1328,42,0	1/1:17,0:17:27.09:1211,27,0	1/1:8,0:12:24.08:939,24,0
chr10	37227347	.	G	GTT	2656.50	PASS	AB=0.701;AC=40;AF=0.714;AN=56;BaseQRankSum=5.767;DP=492;FS=1.732;HRun=14;HaplotypeScore=79.7121;InbreedingCoeff=0.5521;MQ=69.80;MQ0=9;MQRankSum=-1.900;QD=7.12;ReadPosRankSum=-1.824;VQSLOD=0.5096;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,0:19:9.48:88,9,0	1/1:3,0:8:12.36:50,12,0	0/0:25,1:17:14.11:0,14,111	0/0:18,0:10:14.02:0,14,99	0/0:22,0:23:20:0,20,299	1/1:6,0:10:11.83:108,12,0	1/1:3,2:14:26.41:257,26,0	1/1:7,1:20:21.52:132,22,0	0/0:23,0:24:25.64:0,26,233	1/1:6,1:18:24.32:221,24,0	1/1:6,1:18:18.19:135,18,0	1/1:5,0:13:7.57:37,8,0	0/1:11,1:18:9.46:9,0,17	0/1:8,1:24:0.63:79,0,1	1/1:9,1:20:33:314,33,0	0/1:19,0:19:0.44:0,0,261	0/0:24,0:24:48.83:0,49,389	1/1:4,0:14:14.92:130,15,0	0/1:8,2:21:1.81:195,0,2	0/1:7,1:13:3.90:81,0,4	1/1:8,0:10:5.21:18,5,0	1/1:2,1:9:14.99:82,15,0	1/1:5,1:19:22.43:107,22,0	1/1:0,1:11:19.86:99,20,0	1/1:4,2:16:13.68:126,14,0	1/1:24,0:24:47.38:382,47,0	0/1:7,1:23:27.68:86,0,28	1/1:9,0:9:11.99:102,12,0
chr10	37227349	.	T	TTTTG	1554.33	PASS	AB=1.000;AC=12;AF=0.214;AN=56;BaseQRankSum=0.962;DP=486;FS=26.406;HRun=0;HaplotypeScore=97.1948;InbreedingCoeff=0.3501;MQ=69.59;MQ0=10;MQRankSum=-2.244;QD=10.72;ReadPosRankSum=2.167;VQSLOD=1.4062;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:19,0:19:48.76:49,0,72	0/0:8,0:8:14.66:0,15,110	0/0:31,0:17:35.47:0,35,361	0/0:20,0:10:23.88:0,24,290	0/0:24,0:24:58.90:0,59,847	0/1:11,0:11:34.82:55,0,35	0/1:14,0:14:35.76:75,0,36	0/0:20,0:20:23.01:0,23,256	0/0:22,0:22:59.55:0,60,753	0/1:17,0:17:14.81:15,0,159	0/1:17,0:17:8.14:8,0,66	0/0:12,0:12:14.99:0,15,127	0/0:16,0:16:32.90:0,33,295	0/0:25,0:24:44.05:0,44,354	0/1:19,0:19:69.21:119,0,69	0/0:20,0:19:54.29:0,54,806	0/0:24,0:24:58.84:0,59,923	1/1:14,0:14:13.78:66,14,0	0/0:20,0:20:49.30:0,49,370	0/0:13,0:13:14.30:0,14,234	0/0:10,0:10:14.91:0,15,113	0/0:9,0:9:25.98:0,26,200	0/0:16,0:16:36.19:0,36,257	0/0:11,0:11:22.97:0,23,169	0/0:16,0:16:23.91:0,24,179	1/1:4,18:23:37.48:1053,37,0	0/0:23,0:23:48.60:0,49,446	1/1:1,9:10:12.04:279,12,0
chr10	37229014	.	TA	T	3992.31	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=16.653;DP=623;FS=1.673;HRun=6;HaplotypeScore=72.0315;InbreedingCoeff=0.9895;MQ=73.40;MQ0=0;MQRankSum=0.669;QD=27.34;ReadPosRankSum=-0.438;VQSLOD=3.9967;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,26:31:72.18:764,72,0	0/0:9,0:9:21.07:0,21,276	0/0:15,0:15:9.61:0,10,235	0/0:18,0:19:31.34:0,31,439	0/0:21,0:21:60.20:0,60,790	1/1:4,17:21:51.13:541,51,0	1/1:0,12:12:27.07:286,27,0	0/0:52,0:52:99:0,129,1672	0/0:21,0:21:60.18:0,60,775	1/1:2,26:28:78.16:811,78,0	1/1:1,14:15:42.11:446,42,0	0/0:21,0:21:54.18:0,54,710	0/0:18,0:18:51.17:0,51,671	0/0:21,0:21:60.15:0,60,770	1/1:0,26:26:75.19:794,75,0	0/0:29,0:29:84.24:0,84,1064	0/0:18,0:18:51.17:0,51,671	1/1:1,12:13:33.08:350,33,0	0/0:25,0:25:63.20:0,63,829	0/0:37,0:37:96.31:0,96,1262	0/0:12,0:12:33.11:0,33,434	0/0:23,0:23:60.20:0,60,789	0/0:27,0:27:78.25:0,78,1026	0/0:14,0:14:39.13:0,39,513	0/0:18,0:18:54.18:0,54,710	0/0:32,1:33:61.45:0,61,1140	0/0:27,0:27:72.23:0,72,947	0/0:17,0:17:51.17:0,51,671
chr10	37230289	.	T	TAGTA	1576.12	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-5.844;DP=413;FS=0.000;HRun=0;HaplotypeScore=68.9723;InbreedingCoeff=0.9341;MQ=77.83;MQ0=2;MQRankSum=-2.588;QD=52.54;ReadPosRankSum=-1.799;VQSLOD=3.5689;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:33.11:0,33,607	0/0:5,0:5:12.04:0,12,221	0/0:17,0:11:18.05:0,18,314	0/0:34,0:17:21.11:0,21,498	0/0:12,0:12:33.10:0,33,560	0/0:19,0:19:54.16:0,54,933	0/0:7,0:7:21.07:0,21,381	0/0:28,0:28:66.23:0,66,1209	0/0:20,0:20:51.17:0,51,938	0/0:12,0:12:36.12:0,36,663	0/0:10,0:10:27.09:0,27,497	0/0:11,0:11:33.10:0,33,573	0/0:10,0:10:27.09:0,27,496	0/0:7,0:7:18.06:0,18,331	0/0:8,0:8:21.07:0,21,386	0/0:11,0:11:30.10:0,30,552	0/0:25,0:25:75.26:0,75,1377	0/0:9,0:9:27.09:0,27,492	0/0:20,0:20:48.16:0,48,838	0/0:14,0:14:36.12:0,36,661	0/0:11,0:11:33.11:0,33,605	0/0:4,0:4:12.04:0,12,221	0/0:9,0:9:21.07:0,21,386	0/0:19,0:19:48.15:0,48,835	0/0:22,0:22:66.23:0,66,1214	1/1:1,18:20:54.19:1376,54,0	0/0:15,0:15:45.15:0,45,825	1/1:0,8:10:11.71:316,12,0
chr10	37231467	.	A	ACGTGCACGTGTG	5904.08	PASS	AB=0.962;AC=25;AF=0.446;AN=56;BaseQRankSum=9.191;DP=590;FS=14.238;HRun=0;HaplotypeScore=295.3280;InbreedingCoeff=-0.4345;MQ=66.35;MQ0=5;MQRankSum=-10.258;QD=13.54;ReadPosRankSum=0.356;VQSLOD=1.4363;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:27:70.70:71,0,284	0/1:9,0:9:37.45:37,0,96	0/0:33,0:24:65.65:0,66,1745	0/0:30,0:27:68.39:0,68,2137	0/0:21,0:21:60.11:0,60,1888	0/1:20,0:20:99:150,0,156	0/1:17,0:17:56.84:131,0,57	0/1:20,0:20:99:111,0,679	0/0:24,0:24:69.22:0,69,2503	0/1:18,0:18:99:187,0,185	0/1:14,0:14:67.87:137,0,68	0/1:11,7:21:16.21:16,0,35	0/1:15,0:14:75.16:187,0,75	0/1:20,0:19:88.01:88,0,123	0/1:17,0:17:61.35:66,0,61	0/0:16,0:16:48.15:0,48,1735	0/0:29,0:29:81.28:0,81,2997	0/1:23,0:23:99:104,0,441	0/1:20,0:19:23.18:23,0,594	1/1:12,0:12:5.95:73,6,0	0/1:19,0:19:58.44:58,0,431	0/1:22,0:22:84.15:84,0,108	1/1:7,5:16:2.88:15,3,0	0/1:6,4:17:37.07:142,0,37	0/1:12,0:12:10.06:10,0,195	0/1:39,0:39:99:2613,0,102	0/1:31,0:31:99:229,0,423	1/1:27,0:27:4.45:1372,4,0
chr10	37231469	.	G	GTGCACACA	10866.85	PASS	AB=0.588;AC=41;AF=0.732;AN=56;BaseQRankSum=7.641;DP=604;FS=16.486;HRun=0;HaplotypeScore=246.9245;InbreedingCoeff=0.7979;MQ=63.79;MQ0=5;MQRankSum=-10.035;QD=24.75;ReadPosRankSum=-2.801;VQSLOD=2.6845;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:8,13:33:9.01:323,9,0	1/1:9,0:9:9.97:255,10,0	0/0:33,0:23:61.39:0,61,1066	0/0:29,0:26:69.08:0,69,1310	0/0:21,0:21:63:0,63,1536	1/1:7,10:25:26.96:900,27,0	1/1:5,9:24:15.52:625,16,0	1/1:19,0:19:29.51:350,30,0	0/0:24,0:24:69.22:0,69,1833	1/1:11,4:17:38.14:1115,38,0	1/1:9,4:14:21.95:722,22,0	1/1:17,0:17:9:111,9,0	1/1:15,0:14:29.38:538,29,0	1/1:22,0:21:24.51:445,25,0	1/1:6,2:18:15.52:460,16,0	0/0:16,0:16:48.12:0,48,1331	0/0:30,0:30:84.19:0,84,2236	0/1:9,7:30:88.67:622,0,89	1/1:20,0:19:33.25:477,33,0	1/1:13,0:13:12:179,12,0	1/1:19,0:19:15.89:181,16,0	1/1:22,0:22:12:180,12,0	0/0:12,0:12:0.47:0,0,1	1/1:10,0:10:5.38:97,5,0	1/1:12,0:12:8.03:113,8,0	1/1:40,0:40:84.40:1413,84,0	1/1:30,0:30:35.31:662,35,0	1/1:30,0:30:67.04:1102,67,0
chr10	37232032	.	G	GA	801.37	PASS	AB=0.914;AC=10;AF=0.179;AN=56;BaseQRankSum=-4.896;DP=509;FS=4.870;HRun=11;HaplotypeScore=59.0771;InbreedingCoeff=0.5115;MQ=73.88;MQ0=2;MQRankSum=-1.683;QD=7.56;ReadPosRankSum=1.258;VQSLOD=1.9597;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:38:97.25:0,97,738	0/0:4,0:4:11.94:0,12,91	0/0:15,0:17:34.98:0,35,200	0/1:15,0:15:2.29:2,0,112	0/0:13,0:13:24.37:0,24,186	0/0:24,1:27:27.35:0,27,371	0/0:7,0:7:20.92:0,21,162	0/0:23,0:25:44.89:0,45,309	0/0:23,0:24:61.75:0,62,467	0/0:13,0:14:22.91:0,23,168	0/1:11,2:13:28.01:28,0,176	1/1:1,11:14:19.26:250,19,0	0/0:16,1:17:44.81:0,45,348	0/0:16,2:18:14.37:0,14,292	0/0:20,0:21:52.81:0,53,396	0/0:22,0:22:59.72:0,60,462	0/0:21,0:22:58.80:0,59,447	0/0:20,0:19:50.79:0,51,394	0/0:27,0:28:64.36:0,64,480	0/0:15,0:15:38.84:0,39,302	0/1:17,2:21:12.06:12,0,262	0/0:11,0:11:23.88:0,24,186	1/1:7,9:16:6.82:251,7,0	1/1:5,13:19:38.92:395,39,0	0/0:13,0:13:32.85:0,33,254	0/0:19,0:20:43.54:0,44,318	0/0:22,1:25:27.39:0,27,375	0/1:6,1:7:15.50:16,0,78
chr10	37232436	.	T	TACACAC	6330.33	PASS	AB=0.958;AC=50;AF=0.893;AN=56;BaseQRankSum=0.849;DP=583;FS=0.000;HRun=0;HaplotypeScore=189.3736;InbreedingCoeff=0.3923;MQ=62.12;MQ0=16;MQRankSum=0.603;QD=11.45;ReadPosRankSum=1.342;VQSLOD=4.0297;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:24:6.01:86,6,0	1/1:10,0:10:9.03:187,9,0	0/0:30,0:12:6:0,6,76	0/1:36,0:20:0:0,0,0	0/1:12,0:15:0.03:0,0,0	1/1:17,0:17:9.03:179,9,0	1/1:26,0:29:17.67:345,18,0	1/1:30,0:30:27.05:460,27,0	1/1:25,0:25:8.91:200,9,0	1/1:25,0:23:37.68:738,38,0	1/1:16,0:16:2.98:62,3,0	1/1:12,8:29:17.79:492,18,0	1/1:17,0:16:26.09:545,26,0	1/1:17,0:17:12.03:261,12,0	1/1:20,0:23:14.59:388,15,0	1/1:22,0:22:3.01:33,3,0	1/1:12,0:13:9.50:225,10,0	1/1:16,0:16:12.04:320,12,0	1/1:13,0:13:3.01:60,3,0	0/1:14,0:14:0.10:0,0,0	1/1:25,0:22:6.02:119,6,0	0/1:22,0:22:0:0,0,0	1/1:11,4:15:12.04:289,12,0	1/1:16,4:23:12.04:246,12,0	1/1:19,0:20:2.55:96,3,0	1/1:8,0:12:27.09:655,27,0	1/1:26,0:24:11.96:266,12,0	1/1:9,0:8:3.01:78,3,0
chr10	37234242	.	CTTTTTTTTTT	C	5146.94	PASS	AB=0.607;AC=17;AF=0.315;AN=54;BaseQRankSum=0.425;DP=372;FS=3.780;HRun=20;HaplotypeScore=101.1841;InbreedingCoeff=0.7518;MQ=59.66;MQ0=21;MQRankSum=-2.271;QD=41.85;ReadPosRankSum=5.995;VQSLOD=1.1026;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:23:50.14:0,50,1372	1/1:0,7:7:21.07:543,21,0	0/0:29,0:8:9.18:0,9,161	0/0:32,0:10:15.93:0,16,258	0/0:10,0:13:39.03:0,39,1260	0/0:5,0:5:15.05:0,15,304	0/0:4,0:4:6.02:0,6,281	1/1:18,16:34:46.67:875,47,0	0/0:6,0:9:21.07:0,21,890	0/0:14,0:15:42.13:0,42,1021	0/0:4,0:14:18.06:0,18,746	0/0:0,0:4:3.01:0,3,141	1/1:0,3:3:9.03:215,9,0	1/1:1,4:5:6:155,6,0	0/0:6,0:4:12.04:0,12,355	0/0:5,0:4:12.04:0,12,507	0/0:20,0:24:54.18:0,54,2189	0/0:8,0:12:6.02:0,6,203	0/1:6,11:16:20.41:648,0,20	1/1:3,16:17:45.03:1099,45,0	./.	1/1:0,10:10:15.05:381,15,0	0/0:1,0:4:3.01:0,3,143	0/0:5,0:3:6.91:0,7,267	1/1:6,11:15:20.79:543,21,0	0/0:4,0:17:45.63:0,46,1141	1/1:0,11:11:27.09:686,27,0	0/0:4,0:14:9.03:0,9,273
chr10	37234662	.	C	CT	2213.27	PASS	AB=0.863;AC=26;AF=0.464;AN=56;BaseQRankSum=-7.095;DP=534;FS=0.433;HRun=13;HaplotypeScore=80.8062;InbreedingCoeff=0.2115;MQ=73.14;MQ0=0;MQRankSum=-0.660;QD=6.03;ReadPosRankSum=-0.091;VQSLOD=2.4375;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:18,6:26:20.13:309,0,20	0/0:11,0:11:14.82:0,15,103	0/1:14,0:11:2.88:7,0,3	0/0:13,0:12:6.46:0,6,40	0/1:31,1:36:29.88:30,0,246	1/1:5,15:20:6.45:202,6,0	0/1:4,7:11:8.57:72,0,9	0/1:17,5:23:14.42:14,0,53	0/1:20,2:23:4.84:5,0,232	1/1:6,10:17:24.72:202,25,0	1/1:5,8:13:31.10:258,31,0	0/1:5,12:17:14.14:168,0,14	0/1:11,0:13:0.32:0,0,64	0/1:14,0:15:6.03:6,0,72	1/1:4,11:15:14.75:139,15,0	0/0:20,0:20:22.09:0,22,265	0/0:21,0:23:30.34:0,30,314	1/1:3,24:27:51.06:474,51,0	0/1:12,3:16:26.93:27,0,121	0/1:22,2:26:9.29:9,0,226	0/0:23,1:25:15.79:0,16,244	0/0:15,0:16:20.02:0,20,145	1/1:11,6:18:12.39:233,12,0	1/1:3,12:17:26.71:224,27,0	0/0:18,1:20:12.82:0,13,223	0/1:17,2:19:20.06:20,0,170	0/0:24,0:24:38.49:0,38,265	0/0:14,0:14:17.79:0,18,123
chr10	37235169	.	G	GA	1846.03	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-7.242;DP=629;FS=3.957;HRun=7;HaplotypeScore=62.4350;InbreedingCoeff=0.9664;MQ=75.73;MQ0=0;MQRankSum=-2.187;QD=26.75;ReadPosRankSum=1.182;VQSLOD=4.4961;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,132,1274	0/0:5,0:5:15:0,15,137	0/0:19,0:19:39.08:0,39,438	0/0:18,0:18:7.62:0,8,288	0/0:32,0:32:90.13:0,90,863	0/0:23,0:23:66.10:0,66,637	0/0:22,0:22:60.09:0,60,579	0/0:30,0:30:87.10:0,87,825	0/0:31,0:31:87.11:0,87,832	0/0:25,0:25:69.11:0,69,666	0/0:18,0:18:48.07:0,48,462	1/1:3,18:21:51.16:616,51,0	0/0:20,0:20:57.09:0,57,550	0/0:21,0:21:54.08:0,54,520	0/0:22,0:22:54.06:0,54,516	0/0:12,0:12:33.05:0,33,319	0/0:33,0:33:78.06:0,78,738	0/0:22,0:22:66.11:0,66,637	0/0:15,0:15:42.07:0,42,404	0/0:21,0:21:60.10:0,60,579	0/0:27,0:27:69.10:0,69,666	0/0:29,0:29:78.12:0,78,753	1/1:2,23:25:66.20:793,66,0	1/1:1,22:23:48.15:580,48,0	0/0:10,0:10:24.04:0,24,232	0/0:22,0:22:66.11:0,66,637	0/0:26,0:26:72.07:0,72,686	0/0:9,0:9:27.04:0,27,260
chr10	37235511	.	C	CATT	28939.57	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-14.344;DP=701;FS=2.976;HRun=0;HaplotypeScore=78.7361;InbreedingCoeff=0.9994;MQ=70.18;MQ0=0;MQRankSum=-4.685;QD=53.59;ReadPosRankSum=1.726;VQSLOD=7.2130;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,26:29:63.22:1411,63,0	1/1:1,9:10:27.09:602,27,0	0/0:14,0:14:36.12:0,36,588	0/0:19,0:19:38.31:0,38,668	0/0:34,0:34:93.30:0,93,1514	1/1:3,25:28:75.26:1699,75,0	1/1:4,16:21:42.14:925,42,0	1/1:6,28:35:93.27:1920,93,0	0/0:35,0:35:99:0,99,1585	1/1:1,27:29:81.26:1750,81,0	1/1:5,15:20:48.16:1015,48,0	1/1:2,17:19:42.14:952,42,0	1/1:0,14:14:39.13:884,39,0	1/1:1,25:26:66.18:1421,66,0	1/1:0,24:24:69.24:1559,69,0	0/0:27,0:27:75.22:0,75,1166	0/0:32,0:32:90.26:0,90,1444	1/1:2,17:19:45.15:1019,45,0	1/1:4,23:28:75.23:1579,75,0	1/1:3,32:35:84.18:1777,84,0	1/1:2,24:26:60.21:1357,60,0	1/1:2,25:29:69.19:1488,69,0	1/1:3,26:29:60.16:1310,60,0	1/1:1,14:15:30.24:651,30,0	1/1:2,23:25:60.21:1347,60,0	1/1:3,27:31:90.29:1945,90,0	1/1:2,28:30:78.22:1717,78,0	1/1:0,18:18:27.09:612,27,0
chr10	37237127	.	C	CT	2502.50	PASS	AB=0.699;AC=34;AF=0.607;AN=56;BaseQRankSum=-2.025;DP=466;FS=1.693;HRun=14;HaplotypeScore=63.3025;InbreedingCoeff=0.2345;MQ=65.47;MQ0=3;MQRankSum=-1.113;QD=6.99;ReadPosRankSum=-0.576;VQSLOD=2.4027;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:11,26:38:16.98:204,0,17	1/1:1,1:2:3:26,3,0	0/0:9,0:8:2.79:0,3,17	0/1:5,1:5:0.04:0,0,0	0/1:16,2:20:15.63:16,0,114	0/1:7,10:17:1.30:107,0,1	1/1:5,11:15:22.24:187,22,0	0/1:18,13:31:16.20:218,0,16	0/0:15,0:15:26.49:0,26,169	1/1:8,10:18:16.35:134,16,0	1/1:5,8:14:17.88:142,18,0	0/1:8,11:20:16.81:112,0,17	1/1:4,9:13:7.70:183,8,0	1/1:3,7:10:9:79,9,0	0/1:6,4:10:9.55:65,0,10	0/0:17,0:17:35.36:0,35,230	0/0:19,1:20:10.76:0,11,187	0/1:6,15:21:5.70:203,0,6	1/1:18,4:22:1.16:138,1,0	1/1:7,11:19:21.66:193,22,0	0/1:8,3:11:17.49:17,0,30	1/1:2,2:4:3.89:28,4,0	1/1:4,5:9:12:106,12,0	1/1:4,7:12:14.84:120,15,0	0/1:6,12:17:7.86:174,0,8	0/0:26,0:28:51.12:0,51,319	1/1:5,18:24:26.84:225,27,0	0/0:16,0:19:18.77:0,19,167
chr10	37239039	.	C	CTTGA	13106.84	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-12.015;DP=543;FS=10.348;HRun=0;HaplotypeScore=81.6495;InbreedingCoeff=0.9956;MQ=65.13;MQ0=0;MQRankSum=-6.182;QD=65.21;ReadPosRankSum=-1.398;VQSLOD=6.3569;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:63.22:0,63,1175	1/1:1,11:12:33.11:880,33,0	0/0:16,0:15:34.41:0,34,570	0/0:17,0:13:17.93:0,18,335	0/0:28,0:28:81.26:0,81,1472	0/0:21,0:21:60.17:0,60,1053	0/0:15,0:15:39.13:0,39,711	1/1:4,16:23:66.20:1584,66,0	0/0:19,0:19:54.19:0,54,1008	0/0:20,0:20:57.20:0,57,1063	0/0:20,0:20:54.19:0,54,1008	0/0:10,0:10:27.09:0,27,503	1/1:0,18:19:48.16:1277,48,0	1/1:2,20:22:54.12:1376,54,0	0/0:12,0:12:33.11:0,33,616	0/0:8,0:8:24.05:0,24,413	0/0:32,0:32:90.20:0,90,1608	0/0:34,0:34:96.32:0,96,1760	1/1:9,18:29:78.25:1932,78,0	1/1:4,26:30:78.20:2008,78,0	1/1:5,8:13:27.09:607,27,0	1/1:2,11:13:36.59:934,37,0	0/0:20,0:20:60.19:0,60,1088	0/0:11,0:11:33.11:0,33,581	1/1:2,19:22:60.21:1562,60,0	0/0:30,0:30:90.30:0,90,1651	1/1:6,12:18:36.12:946,36,0	0/0:5,0:5:15.05:0,15,280
chr10	37239220	.	CT	C	1495.95	PASS	AB=0.744;AC=43;AF=0.768;AN=56;BaseQRankSum=1.083;DP=404;FS=7.999;HRun=13;HaplotypeScore=49.5136;InbreedingCoeff=0.4411;MQ=64.25;MQ0=9;MQRankSum=-1.191;QD=4.63;ReadPosRankSum=0.731;VQSLOD=0.7603;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:15,20:36:43.77:144,0,44	1/1:0,0:3:5.89:17,6,0	0/1:25,0:8:6.47:6,0,49	0/0:21,0:6:11.67:0,12,74	0/0:12,0:12:24.03:0,24,229	1/1:5,8:13:8.93:65,9,0	1/1:4,15:19:0.65:167,1,0	1/1:7,0:16:3.14:19,3,0	0/0:10,0:10:26.81:0,27,221	1/1:7,10:17:0.56:161,1,0	1/1:6,8:14:14.34:99,14,0	1/1:6,0:5:8:50,8,0	1/1:1,0:7:2.04:6,2,0	1/1:4,0:7:8.14:23,8,0	1/1:6,2:7:11.92:88,12,0	0/0:9,0:9:12.70:0,13,118	0/0:27,0:26:25.31:0,25,329	0/1:7,13:21:26.17:127,0,26	1/1:14,0:16:17.33:74,17,0	1/1:4,0:10:12.56:38,13,0	1/1:6,0:16:2.02:6,2,0	1/1:0,0:2:4.07:12,4,0	1/1:5,5:12:5.75:95,6,0	1/1:6,15:20:20.80:153,21,0	1/1:5,0:15:6.10:17,6,0	1/1:2,16:19:36.92:251,37,0	1/1:10,0:15:8.55:25,9,0	1/1:1,1:2:2.95:22,3,0
chr10	37240655	.	TCACACACACATA	T	4624.85	PASS	AB=0.958;AC=31;AF=0.554;AN=56;BaseQRankSum=-4.890;DP=543;FS=2.071;HRun=0;HaplotypeScore=178.6544;InbreedingCoeff=0.1423;MQ=72.34;MQ0=9;MQRankSum=-0.466;QD=12.50;ReadPosRankSum=0.052;VQSLOD=3.7564;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:38,0:38:99:240,0,340	1/1:4,0:4:2.58:24,3,0	0/0:26,0:17:29.97:0,30,415	0/0:35,0:22:29.98:0,30,370	0/0:21,0:21:30.02:0,30,681	0/1:19,0:19:97.25:144,0,97	0/1:22,0:22:95.22:95,0,205	1/1:24,0:24:40.89:326,41,0	0/0:22,0:22:42.08:0,42,1228	0/1:26,0:25:68.79:281,0,69	0/1:15,0:15:99:102,0,199	0/0:19,0:19:6.01:0,6,95	1/1:17,1:18:38.31:470,38,0	1/1:3,12:15:9.03:324,9,0	0/1:18,0:18:31.88:32,0,161	0/0:28,0:28:39.01:0,39,1170	0/0:22,0:22:49.44:0,49,1131	0/1:21,0:21:99:109,0,153	1/1:14,0:14:20.88:176,21,0	0/1:3,16:19:6.83:523,0,7	1/1:21,0:21:17.16:170,17,0	1/1:2,16:17:15.05:524,15,0	0/1:10,0:10:22.13:22,0,68	0/1:23,0:23:39.70:94,0,40	1/1:14,0:14:33.01:380,33,0	0/1:12,0:12:46.84:47,0,258	1/1:2,15:18:14.63:521,15,0	1/1:1,0:1:2.99:23,3,0
chr10	37240658	.	CACACACAT	C	5137.33	PASS	AB=0.983;AC=41;AF=0.732;AN=56;BaseQRankSum=-1.237;DP=526;FS=2.896;HRun=0;HaplotypeScore=139.1266;InbreedingCoeff=0.6555;MQ=68.32;MQ0=10;MQRankSum=-2.709;QD=13.66;ReadPosRankSum=1.246;VQSLOD=3.8248;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:35,0:35:28.53:355,29,0	1/1:4,0:4:2.50:23,2,0	0/0:24,0:15:29.91:0,30,314	0/0:32,0:19:29.98:0,30,322	0/0:21,0:21:30.01:0,30,436	1/1:16,0:16:17.68:186,18,0	1/1:22,1:23:15.63:315,16,0	1/1:22,0:21:43.48:339,43,0	0/0:22,0:22:42.06:0,42,755	1/1:25,0:24:55.71:478,56,0	1/1:13,1:14:9.79:237,10,0	0/1:21,0:21:9:17,0,9	1/1:18,0:18:38.25:358,38,0	1/1:14,0:14:9.03:183,9,0	1/1:17,0:17:13.29:124,13,0	0/0:27,0:27:38.49:0,38,723	0/0:24,0:24:55.32:0,55,804	0/1:18,1:19:32.20:275,0,32	1/1:13,0:13:20.76:149,21,0	1/1:17,0:17:18.04:328,18,0	1/1:22,0:22:17.46:145,17,0	1/1:18,0:17:15.05:288,15,0	1/1:8,1:9:16.83:217,17,0	1/1:21,1:22:32.98:425,33,0	1/1:15,0:15:32.98:304,33,0	1/1:12,0:12:5.91:83,6,0	0/1:19,0:19:5.30:286,0,5	1/1:1,0:1:2.99:23,3,0
chr10	37240660	.	CACACAT	C	5973.45	PASS	AB=0.875;AC=43;AF=0.768;AN=56;BaseQRankSum=-1.301;DP=526;FS=2.960;HRun=0;HaplotypeScore=122.5972;InbreedingCoeff=0.7887;MQ=66.53;MQ0=11;MQRankSum=0.211;QD=15.76;ReadPosRankSum=0.632;VQSLOD=3.8210;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:37,0:36:68.34:549,68,0	1/1:4,0:4:2.71:23,3,0	0/0:23,0:14:29.91:0,30,290	0/0:31,0:18:29.98:0,30,291	0/0:20,0:20:29.55:0,30,291	1/1:16,0:16:29.92:255,30,0	1/1:17,5:22:40.01:599,40,0	1/1:21,0:20:44.75:360,45,0	0/0:22,0:22:42.53:0,43,525	1/1:24,1:24:62.80:572,63,0	1/1:13,1:14:32.97:337,33,0	1/1:20,1:21:5.30:79,5,0	1/1:18,0:18:38.25:330,38,0	1/1:14,0:14:9.03:141,9,0	1/1:14,3:17:23.08:347,23,0	0/0:27,0:27:11.52:0,12,494	0/0:24,0:24:55.22:0,55,601	0/1:18,3:21:13.84:385,0,14	1/1:13,0:13:20.76:149,21,0	1/1:17,0:17:18.04:258,18,0	1/1:22,0:22:17.41:144,17,0	1/1:18,0:17:15.05:218,15,0	1/1:10,0:10:19.23:194,19,0	1/1:22,0:22:35.96:361,36,0	1/1:16,0:16:35.97:311,36,0	1/1:11,0:11:13.71:108,14,0	1/1:19,0:19:13:231,13,0	1/1:1,0:1:2.99:23,3,0
chr10	37240662	.	CACAT	C	5472.26	PASS	AB=1.000;AC=45;AF=0.804;AN=56;BaseQRankSum=0.143;DP=511;FS=0.494;HRun=0;HaplotypeScore=108.4641;InbreedingCoeff=0.7741;MQ=59.77;MQ0=11;MQRankSum=-1.642;QD=14.03;ReadPosRankSum=-1.370;VQSLOD=4.3719;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:38,0:37:80.71:637,81,0	1/1:3,0:3:2.85:23,3,0	0/0:22,0:13:29.91:0,30,258	0/0:26,0:11:28.11:0,28,267	0/1:20,0:20:9.67:10,0,209	1/1:18,0:18:28.96:224,29,0	1/1:21,0:21:41.90:435,42,0	1/1:19,0:18:44.86:369,45,0	0/0:22,0:22:41.98:0,42,331	1/1:26,0:25:65.80:568,66,0	1/1:14,0:14:32.97:290,33,0	1/1:3,18:21:5.83:92,6,0	1/1:18,0:18:38.61:302,39,0	1/1:14,0:14:9.02:99,9,0	1/1:19,0:19:29.04:263,29,0	0/0:27,0:27:13.76:0,14,319	0/0:24,0:24:10.30:0,10,377	1/1:18,0:18:40.13:342,40,0	1/1:10,0:10:20.76:149,21,0	1/1:17,0:17:18.03:188,18,0	1/1:22,0:22:17.70:144,18,0	1/1:18,0:17:15:151,15,0	1/1:10,0:10:18.46:168,18,0	1/1:20,0:20:38.95:355,39,0	1/1:16,0:16:32.84:275,33,0	1/1:10,0:10:29.50:200,30,0	1/1:17,0:17:15.30:165,15,0	1/1:1,0:1:2.99:23,3,0
chr10	37240666	.	TAC	T	1044.74	PASS	AB=0.902;AC=30;AF=0.625;AN=48;BaseQRankSum=4.840;DP=510;FS=2.660;HRun=0;HaplotypeScore=111.2841;InbreedingCoeff=0.3992;MQ=57.81;MQ0=11;MQRankSum=-0.530;QD=3.34;ReadPosRankSum=4.955;VQSLOD=2.2094;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:39:0.16:0,0,0	./.	0/0:24,0:14:5.89:0,6,60	0/0:29,0:12:2.92:0,3,17	1/1:10,6:17:8.85:75,9,0	0/1:20,0:20:0.04:0,0,0	1/1:22,0:22:19.84:92,20,0	./.	1/1:11,10:22:23.85:268,24,0	0/0:27,0:26:5.13:0,5,106	0/1:15,0:15:16.37:17,0,16	1/1:21,0:21:5.09:23,5,0	1/1:15,0:15:5.64:27,6,0	1/1:12,0:12:8.52:41,9,0	1/1:17,0:17:8.78:39,9,0	0/1:10,17:27:44.33:160,0,44	1/1:18,4:22:16.59:169,17,0	0/1:17,0:17:5.98:36,0,6	./.	1/1:17,0:17:13.99:67,14,0	0/0:20,0:20:6:0,6,56	1/1:17,0:16:12.12:56,12,0	1/1:11,0:11:6.01:26,6,0	1/1:23,0:23:5.26:28,5,0	0/0:16,0:16:2.84:0,3,14	0/0:12,0:12:2.66:0,3,5	1/1:17,0:17:12.37:65,12,0	./.
chr10	37240717	.	G	GC	2566.48	PASS	AB=0.938;AC=15;AF=0.288;AN=52;BaseQRankSum=-4.551;DP=510;FS=22.508;HRun=8;HaplotypeScore=121.3009;InbreedingCoeff=0.9133;MQ=81.00;MQ0=0;MQRankSum=-3.064;QD=19.44;ReadPosRankSum=-3.080;VQSLOD=1.6205;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:6,15:21:48.14:553,48,0	0/0:11,0:11:22.78:0,23,204	0/0:28,0:27:62.63:0,63,526	0/0:28,0:26:42.79:0,43,365	0/0:16,0:16:32.98:0,33,298	1/1:2,12:14:33.10:381,33,0	1/1:14,11:25:59.96:592,60,0	0/1:14,1:15:8.43:8,0,168	0/0:20,0:20:47.95:0,48,418	1/1:6,6:12:18.02:194,18,0	1/1:2,7:9:21.06:242,21,0	0/0:17,0:17:29.68:0,30,274	0/0:11,0:10:20.99:0,21,192	0/0:14,0:14:23.99:0,24,220	1/1:9,9:17:36.93:382,37,0	0/0:24,0:24:41.13:0,41,383	0/0:25,0:25:67.79:0,68,623	1/1:8,9:18:41.86:408,42,0	0/0:15,0:15:33.01:0,33,302	0/0:15,0:15:26.96:0,27,239	0/0:54,0:54:77.47:0,77,850	0/0:15,0:15:39.01:0,39,357	0/0:19,0:19:45.02:0,45,412	0/0:33,0:33:53.99:0,54,577	0/0:16,0:16:32.88:0,33,298	./.	0/0:15,0:15:36:0,36,329	./.
chr10	37240787	.	G	GCA	881.28	PASS	AB=0.978;AC=11;AF=0.204;AN=54;BaseQRankSum=-2.331;DP=458;FS=5.373;HRun=0;HaplotypeScore=143.9399;InbreedingCoeff=0.3403;MQ=47.75;MQ0=5;MQRankSum=0.804;QD=6.25;ReadPosRankSum=-3.260;VQSLOD=2.5203;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:32.53:0,33,247	0/1:6,0:6:12.18:72,0,12	0/0:29,0:15:26.70:0,27,287	0/0:19,0:11:15.01:0,15,160	0/0:17,0:17:45.14:0,45,562	0/0:16,0:16:23.78:0,24,199	0/0:19,0:19:18.52:0,19,181	0/1:18,1:19:5.28:198,0,5	0/0:14,0:16:41.80:0,42,477	0/0:17,0:16:38.76:0,39,355	0/0:11,0:11:21.02:0,21,231	0/0:17,0:17:35.51:0,36,293	0/0:12,0:12:9.92:0,10,40	0/1:7,0:7:56.44:76,0,56	0/0:17,0:17:26.88:0,27,273	0/0:13,0:14:32.94:0,33,389	0/0:28,0:28:75.23:0,75,922	0/0:14,0:14:31.97:0,32,245	0/1:17,0:15:31.73:32,0,33	0/0:17,0:17:1.70:0,2,20	1/1:42,8:49:17.68:366,18,0	1/1:12,3:15:11.79:156,12,0	0/0:14,0:14:24.03:0,24,273	0/0:22,0:22:2.92:0,3,18	1/1:12,0:12:5.36:23,5,0	0/0:1,0:1:3.01:0,3,37	0/1:14,1:15:48.75:112,0,49	./.
chr10	37240793	.	ACACACACG	A	5135.02	PASS	AB=1.000;AC=39;AF=0.722;AN=54;BaseQRankSum=7.486;DP=452;FS=0.000;HRun=0;HaplotypeScore=168.0034;InbreedingCoeff=0.6099;MQ=47.45;MQ0=5;MQRankSum=-7.964;QD=15.80;ReadPosRankSum=0.361;VQSLOD=3.2986;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,9:16:24.08:616,24,0	0/1:7,0:7:9.08:45,0,9	0/0:32,0:15:30.06:0,30,786	0/0:18,0:11:3.01:0,3,98	0/0:19,0:19:42.13:0,42,1403	1/1:7,7:14:17.98:402,18,0	1/1:13,5:18:15.05:359,15,0	1/1:18,0:18:14.90:101,15,0	0/0:17,0:17:45.14:0,45,1425	1/1:9,7:15:15.05:360,15,0	1/1:9,2:11:12.03:166,12,0	1/1:9,8:17:30.09:717,30,0	1/1:12,0:12:16.63:116,17,0	1/1:10,0:10:12.76:81,13,0	1/1:9,10:19:30.07:524,30,0	0/0:13,0:13:33.11:0,33,1201	0/0:28,0:28:69.24:0,69,2591	1/1:9,6:15:24.08:604,24,0	0/1:16,0:14:20.09:111,0,20	1/1:17,0:17:14.65:98,15,0	0/1:45,0:44:40.33:95,0,40	1/1:14,0:14:11.80:79,12,0	1/1:8,5:13:9.03:180,9,0	1/1:15,5:20:9.02:174,9,0	1/1:11,0:11:5.40:38,5,0	1/1:1,0:1:3.01:74,3,0	1/1:15,0:15:29.56:198,30,0	./.
chr10	37240795	.	ACACACG	A	6425.46	PASS	AB=0.971;AC=32;AF=0.593;AN=54;BaseQRankSum=7.308;DP=455;FS=0.921;HRun=0;HaplotypeScore=151.2393;InbreedingCoeff=0.1813;MQ=47.27;MQ0=5;MQRankSum=-7.613;QD=19.53;ReadPosRankSum=1.791;VQSLOD=4.4795;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:16,0:16:65.89:283,0,66	1/1:4,3:7:4.71:278,5,0	0/0:31,0:15:38.71:0,39,739	0/0:19,0:12:17.61:0,18,218	0/0:18,0:18:51.13:0,51,1368	0/1:15,0:15:26.79:154,0,27	0/1:19,0:19:71.99:148,0,72	1/1:11,7:18:33.11:635,33,0	0/0:17,0:17:48.15:0,48,1267	0/1:16,0:15:99:134,0,209	0/1:10,0:10:10.74:11,0,76	0/1:17,0:17:50.93:320,0,51	1/1:4,9:13:21.54:461,22,0	0/1:6,4:10:15.93:351,0,16	0/1:20,0:20:32.44:182,0,32	0/0:13,0:13:39.13:0,39,1084	0/0:28,0:28:78.25:0,78,2408	0/1:14,0:14:81.59:269,0,82	1/1:8,10:16:30.26:612,30,0	1/1:2,15:17:14.88:345,15,0	1/1:37,7:43:10.86:667,11,0	1/1:6,8:14:18.06:372,18,0	0/1:14,0:14:65.44:65,0,151	1/1:21,0:21:12.01:123,12,0	1/1:3,8:11:9.02:163,9,0	1/1:1,0:1:3.01:36,3,0	1/1:5,9:14:38.73:817,39,0	./.
chr10	37240799	.	ACG	A	1933.20	PASS	AB=1.000;AC=30;AF=0.556;AN=54;BaseQRankSum=10.682;DP=446;FS=0.000;HRun=0;HaplotypeScore=139.7634;InbreedingCoeff=0.3312;MQ=48.14;MQ0=5;MQRankSum=-8.602;QD=6.30;ReadPosRankSum=2.171;VQSLOD=3.0729;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:14,0:14:40.35:84,0,40	1/1:7,0:7:17.57:119,18,0	0/0:32,0:17:22.59:0,23,426	0/0:15,0:9:17.61:0,18,211	0/0:18,0:18:50.79:0,51,855	0/1:14,0:14:26.05:26,0,66	0/1:18,0:18:41.12:41,0,120	1/1:14,0:14:18.95:183,19,0	0/0:21,0:21:18.47:0,18,728	0/1:15,0:14:12.71:13,0,154	0/0:10,0:10:20.94:0,21,197	0/1:17,0:17:64.91:65,0,85	1/1:12,0:12:18.03:111,18,0	1/1:12,0:12:1.17:119,1,0	0/1:19,0:19:68:68,0,183	0/0:14,0:14:24.78:0,25,607	0/0:27,0:27:78.06:0,78,1348	0/1:16,0:16:73.89:74,0,105	1/1:20,1:19:46.38:340,46,0	1/1:16,0:16:14.71:91,15,0	1/1:37,5:41:38.64:296,39,0	1/1:13,0:13:10.88:83,11,0	0/1:14,0:14:7:7,0,234	1/1:16,2:18:11.78:85,12,0	1/1:9,1:10:8.88:62,9,0	0/0:1,0:1:0.89:0,1,2	1/1:15,0:15:40.78:256,41,0	./.
chr10	37240827	.	G	GC	4154.72	PASS	AC=40;AF=0.769;AN=52;BaseQRankSum=3.222;DP=413;FS=47.288;HRun=8;HaplotypeScore=120.4842;InbreedingCoeff=0.8564;MQ=65.99;MQ0=0;MQRankSum=-4.384;QD=13.71;ReadPosRankSum=-3.201;VQSLOD=-0.5899;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:23:12.38:64,12,0	1/1:4,3:7:12.02:129,12,0	0/0:15,0:15:19.84:0,20,153	0/0:9,0:7:14.99:0,15,132	0/0:12,0:12:20.97:0,21,188	1/1:11,0:12:4.68:56,5,0	1/1:10,0:22:37.85:190,38,0	1/1:7,10:17:27.05:298,27,0	0/0:25,0:25:60.02:0,60,548	1/1:5,0:7:4.09:18,4,0	1/1:1,0:3:5.68:29,6,0	1/1:5,10:15:21.06:242,21,0	1/1:7,6:13:15.03:173,15,0	1/1:6,7:13:18.05:208,18,0	1/1:9,0:12:8.98:44,9,0	0/0:17,0:17:39:0,39,356	0/0:32,0:32:74.95:0,75,675	1/1:11,2:18:20.45:138,20,0	1/1:9,16:24:17.40:508,17,0	1/1:6,7:14:23.85:231,24,0	1/1:14,34:48:42.24:720,42,0	1/1:2,8:10:12.04:138,12,0	1/1:1,4:5:12.04:138,12,0	1/1:6,11:18:31.03:349,31,0	1/1:4,2:6:6:69,6,0	./.	1/1:3,11:14:36.11:413,36,0	./.
chr10	37240881	.	GCACA	G	1642.25	PASS	AB=0.826;AC=17;AF=0.340;AN=50;BaseQRankSum=2.531;DP=465;FS=5.836;HRun=0;HaplotypeScore=129.7730;InbreedingCoeff=0.4676;MQ=51.20;MQ0=8;MQRankSum=-3.953;QD=8.51;ReadPosRankSum=1.879;VQSLOD=2.3537;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:19,4:23:10.75:137,0,11	0/0:4,0:6:6.49:0,6,106	./.	./.	0/0:10,0:10:18.01:0,18,231	1/1:8,4:12:14.09:217,14,0	1/1:16,5:23:26.87:319,27,0	0/0:14,0:13:18.02:0,18,301	0/0:21,0:21:21.04:0,21,404	1/1:3,2:6:9.02:123,9,0	1/1:4,4:9:12.03:171,12,0	1/1:10,0:18:18.02:168,18,0	0/0:14,0:14:17.97:0,18,222	0/0:12,0:14:12.04:0,12,218	1/1:5,8:16:32.66:364,33,0	0/0:20,0:24:47.02:0,47,776	0/1:37,1:43:27.81:28,0,1362	0/1:9,4:14:19.82:215,0,20	0/0:13,0:15:22.32:0,22,366	0/0:8,0:9:3.01:0,3,53	0/0:55,0:60:77.75:0,78,1189	0/0:10,0:11:9.03:0,9,188	0/1:5,0:7:46.76:47,0,51	0/1:18,0:20:31.96:32,0,215	0/0:9,0:11:12.44:0,12,173	0/0:4,0:4:12:0,12,215	0/0:9,0:10:8.96:0,9,159	./.
chr10	37240889	.	A	ACG	352.03	PASS	AB=0.977;AC=9;AF=0.167;AN=54;BaseQRankSum=6.677;DP=507;FS=2.252;HRun=0;HaplotypeScore=134.5525;InbreedingCoeff=-0.0364;MQ=49.91;MQ0=9;MQRankSum=0.305;QD=2.29;ReadPosRankSum=4.317;VQSLOD=2.1763;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:9.28:0,9,362	1/1:5,0:5:0.50:2,0,0	0/0:21,0:9:13.39:0,13,185	0/0:24,0:12:29.20:0,29,313	0/0:9,0:9:17.99:0,18,168	0/0:12,0:11:23.69:0,24,180	0/0:28,0:27:61.57:0,62,487	0/0:14,0:12:31.77:0,32,237	0/0:23,0:23:50.92:0,51,491	0/1:9,0:9:5.04:5,0,129	0/0:10,0:10:20.88:0,21,158	0/0:18,0:18:18.24:0,18,212	0/1:13,0:13:0.47:0,0,85	0/1:14,0:14:15.08:15,0,75	0/0:22,0:22:44.29:0,44,342	0/0:26,0:26:66.03:0,66,684	0/0:49,0:49:99:0,128,1353	0/0:20,0:19:48.84:0,49,343	0/1:14,1:14:20.53:21,0,132	0/0:13,0:13:7.81:0,8,73	0/1:58,6:64:99:146,0,374	0/0:12,0:12:14.26:0,14,119	0/0:6,0:6:14.75:0,15,101	0/1:22,0:22:55.69:231,0,56	0/1:11,0:11:11.87:51,0,12	0/0:7,0:7:17.72:0,18,121	0/0:11,0:11:13.83:0,14,135	./.
chr10	37240931	.	T	TC	3917.86	PASS	AB=0.854;AC=25;AF=0.463;AN=54;BaseQRankSum=6.868;DP=558;FS=0.775;HRun=9;HaplotypeScore=115.5613;InbreedingCoeff=0.7573;MQ=64.64;MQ0=5;MQRankSum=-3.204;QD=13.06;ReadPosRankSum=-1.663;VQSLOD=2.8904;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:31,0:31:76.87:525,77,0	./.	0/1:25,0:16:3.26:3,0,192	0/1:23,0:15:12.38:12,0,124	0/0:13,0:13:32.99:0,33,286	1/1:21,0:20:47.33:315,47,0	1/1:37,0:36:70.91:465,71,0	0/0:12,0:12:26.98:0,27,234	0/0:20,0:20:53.92:0,54,456	1/1:14,0:14:35.15:228,35,0	1/1:20,0:20:41.28:266,41,0	1/1:5,19:24:19.03:418,19,0	0/0:13,0:13:32.99:0,33,286	0/0:14,0:14:26.93:0,27,230	1/1:25,1:26:50.72:395,51,0	0/0:24,0:24:53.96:0,54,469	0/0:48,0:48:99:0,117,1007	1/1:25,0:25:59.38:418,59,0	0/0:12,0:12:20.95:0,21,175	0/0:10,0:11:14.03:0,14,110	0/0:55,1:57:83.01:0,83,812	0/0:10,0:10:14.98:0,15,130	1/1:3,1:4:3.01:33,3,0	1/1:19,10:29:22.04:426,22,0	0/0:10,0:10:17.80:0,18,156	1/1:6,8:14:7.02:299,7,0	0/0:12,0:12:29.99:0,30,260	0/1:2,4:6:34.06:115,0,34
chr10	37240939	.	C	CA	5727.78	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=-1.976;DP=583;FS=3.549;HRun=0;HaplotypeScore=99.0967;InbreedingCoeff=0.5746;MQ=66.23;MQ0=4;MQRankSum=-3.129;QD=20.10;ReadPosRankSum=4.833;VQSLOD=7.0231;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,40:42:76.49:1069,76,0	0/0:2,0:2:3:0,3,27	0/0:24,0:19:29.63:0,30,395	0/1:28,0:19:9:9,0,291	0/0:14,0:14:38.95:0,39,492	1/1:3,17:19:30.40:663,30,0	1/1:0,35:34:75.17:1044,75,0	0/0:15,0:15:40.30:0,40,477	0/0:19,0:19:57.18:0,57,773	1/1:1,15:16:42.11:562,42,0	1/1:2,16:18:42.13:596,42,0	0/1:25,0:25:67.87:71,0,68	0/0:17,0:17:45.04:0,45,539	0/0:19,0:19:48.01:0,48,541	1/1:3,23:26:54.15:735,54,0	0/0:22,0:22:57.18:0,57,777	0/0:49,0:49:99:0,132,1754	1/1:2,21:23:60.19:852,60,0	0/0:12,0:12:27.96:0,28,338	0/0:11,0:11:23.88:0,24,258	0/0:58,0:58:99:0,135,1577	0/0:9,0:9:23.92:0,24,267	1/1:4,0:4:2.03:6,2,0	0/1:27,0:27:74.06:80,0,74	0/0:15,0:15:30.01:0,30,344	0/1:15,0:15:25.08:25,0,92	0/0:12,0:12:36.09:0,36,464	0/1:6,0:6:15.61:16,0,68
chr10	37241278	.	G	GA	491.18	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-4.674;DP=498;FS=4.021;HRun=9;HaplotypeScore=56.2483;InbreedingCoeff=0.8965;MQ=79.67;MQ0=0;MQRankSum=-0.854;QD=18.89;ReadPosRankSum=-1.102;VQSLOD=3.6250;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:98.93:0,99,850	0/0:7,0:8:17.03:0,17,136	0/0:22,0:22:44.22:0,44,352	0/0:9,0:10:12.14:0,12,90	0/0:31,0:31:80.95:0,81,697	0/0:16,1:18:10.84:0,11,311	0/0:15,0:16:38:0,38,312	0/0:30,1:32:46.81:0,47,624	0/0:12,0:12:32.99:0,33,286	0/0:19,0:19:44.73:0,45,370	0/0:20,1:21:20.83:0,21,406	0/0:15,1:16:5.79:0,6,276	0/0:16,0:16:35.89:0,36,303	0/0:10,0:10:20.98:0,21,179	0/0:20,0:20:47.90:0,48,403	0/0:16,0:16:38.99:0,39,339	0/0:15,0:15:41.99:0,42,365	0/0:25,0:25:71.96:0,72,620	0/0:18,0:18:41.99:0,42,365	0/0:18,0:18:44.99:0,45,389	0/0:18,0:18:47.96:0,48,412	0/0:13,0:13:29.99:0,30,260	0/0:16,0:16:44.97:0,45,386	0/0:17,0:17:50.97:0,51,439	0/0:12,0:12:23.07:0,23,207	1/1:7,14:21:42.07:443,42,0	0/0:16,0:16:38.99:0,39,339	1/1:0,5:5:15.04:166,15,0
chr10	37241497	.	G	GACACACACACACAC	1819.73	PASS	AB=0.965;AC=15;AF=0.268;AN=56;BaseQRankSum=6.002;DP=580;FS=3.751;HRun=0;HaplotypeScore=224.7301;InbreedingCoeff=0.4076;MQ=57.39;MQ0=16;MQRankSum=-6.004;QD=9.05;ReadPosRankSum=-3.786;VQSLOD=2.1049;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:75.13:0,75,2343	1/1:4,0:4:5.03:29,5,0	0/0:37,0:17:29.99:0,30,918	0/0:48,0:20:28.80:0,29,652	0/0:18,0:16:39.09:0,39,1353	0/0:12,0:12:33.10:0,33,1068	0/0:24,0:24:45.49:0,45,1379	1/1:13,0:11:7.58:126,8,0	0/0:26,0:26:57.20:0,57,2220	0/0:14,0:14:33.11:0,33,1118	0/0:12,0:12:21.04:0,21,793	0/1:27,0:27:85.43:85,0,2165	1/1:18,0:18:16.25:542,16,0	0/1:10,0:11:19.28:99,0,19	0/0:19,0:18:39.13:0,39,1558	0/0:26,0:26:63.22:0,63,2354	0/1:32,0:32:0.09:0,0,3066	0/0:19,0:19:48.21:0,48,1700	0/1:12,0:10:27.76:359,0,28	0/0:11,0:10:0.47:0,0,1	1/1:23,9:44:0.42:1,0,0	0/1:8,0:9:0.04:0,0,0	0/0:15,0:15:33.09:0,33,1310	0/0:34,0:34:71.94:0,72,2687	0/1:13,0:12:0:0,0,0	0/0:20,0:20:53.28:0,53,2008	0/1:17,0:16:25.67:724,0,26	0/0:5,0:5:15.05:0,15,573
chr10	37241501	.	CACACACCAGGTACATATGTG	C	1810.69	PASS	AB=0.920;AC=10;AF=0.179;AN=56;BaseQRankSum=4.612;DP=592;FS=9.401;HRun=0;HaplotypeScore=267.9114;InbreedingCoeff=0.4431;MQ=54.51;MQ0=27;MQRankSum=-4.330;QD=15.34;ReadPosRankSum=-2.205;VQSLOD=0.8516;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:77.83:0,78,3503	1/1:4,0:4:2.49:7,2,0	0/0:43,0:16:33.57:0,34,1119	0/0:48,0:16:30.06:0,30,832	0/0:19,0:17:42.10:0,42,2153	0/0:13,0:13:33.99:0,34,1600	0/0:24,0:24:30.56:0,31,1922	0/1:15,0:11:20.73:33,0,21	0/0:25,0:25:58.97:0,59,3322	0/0:13,0:13:33.11:0,33,1820	0/0:12,0:12:22.43:0,22,1274	0/0:30,0:30:72.87:0,73,3253	0/1:10,9:19:82.53:98,0,83	1/1:12,0:11:6.49:218,6,0	0/0:20,0:19:40.93:0,41,2376	0/0:25,0:25:66.22:0,66,3455	0/0:33,0:32:12.13:0,12,4772	0/0:19,0:19:51.13:0,51,2576	1/1:13,0:10:21.04:723,21,0	0/0:4,6:9:0:0,0,0	0/1:37,0:37:0.67:51,0,1	0/0:9,0:9:3.27:0,3,15	0/0:16,0:16:34.10:0,34,1918	0/0:36,0:36:79.94:0,80,3965	0/0:13,0:12:3.56:0,4,17	0/0:24,0:24:69.21:0,69,3435	0/1:18,0:17:28.74:824,0,29	0/0:5,0:5:15.05:0,15,592
chr10	37241507	.	CCAGGTACATATGTG	C	1400.08	PASS	AB=0.837;AC=6;AF=0.107;AN=56;BaseQRankSum=3.789;DP=590;FS=4.593;HRun=0;HaplotypeScore=216.2373;InbreedingCoeff=-0.1018;MQ=51.46;MQ0=39;MQRankSum=-3.460;QD=17.28;ReadPosRankSum=-0.717;VQSLOD=2.1425;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:78.92:0,79,3558	0/1:4,1:5:50.77:51,0,81	0/0:46,0:13:39.01:0,39,1202	0/0:62,0:19:40.84:0,41,933	0/0:18,0:16:42.10:0,42,2216	0/0:12,0:12:33.99:0,34,1615	0/0:24,0:24:47.11:0,47,1981	0/1:19,0:15:2.80:3,0,543	0/0:22,0:23:61.98:0,62,3457	0/0:12,0:12:33.11:0,33,1780	0/0:9,0:9:22.79:0,23,1275	0/0:30,0:30:75.90:0,76,3571	0/1:17,0:17:30.01:30,0,270	0/1:7,2:9:81.60:127,0,82	0/0:19,0:18:41.65:0,42,2378	0/0:25,0:25:68.72:0,69,3485	0/0:34,0:33:99:0,99,5095	0/0:19,0:19:54.14:0,54,2679	0/1:5,8:10:26.43:699,0,26	0/0:8,0:8:3.48:0,3,37	0/0:29,1:32:6.11:0,6,49	0/0:3,4:7:3.67:0,4,16	0/0:15,0:15:33.97:0,34,1807	0/0:36,0:36:79.71:0,80,4138	0/0:5,5:10:2.79:0,3,7	0/0:24,0:24:72.23:0,72,3919	0/1:10,6:15:99:608,0,296	0/0:5,0:5:15.05:0,15,636
chr10	37241521	.	GACACACACAC	G	1205.92	PASS	AB=0.811;AC=15;AF=0.278;AN=54;BaseQRankSum=1.967;DP=609;FS=4.318;HRun=0;HaplotypeScore=187.7386;InbreedingCoeff=-0.0063;MQ=43.13;MQ0=54;MQRankSum=-5.060;QD=5.64;ReadPosRankSum=1.636;VQSLOD=2.4740;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:24,8:30:48.36:48,0,99	0/1:4,0:6:48.62:49,0,180	./.	0/0:66,0:13:24.08:0,24,837	0/0:9,0:13:12.04:0,12,366	1/1:5,0:9:8.95:160,9,0	1/1:9,10:19:11.83:274,12,0	0/0:28,0:24:50.13:0,50,1325	0/0:12,0:21:27.08:0,27,652	0/1:6,2:8:57.29:171,0,57	1/1:8,0:8:0.47:1,0,0	0/1:13,2:24:99:152,0,348	0/1:16,0:21:99:180,0,529	0/0:14,0:15:18.88:0,19,701	0/0:13,3:15:2.95:0,3,118	0/0:9,0:18:33.11:0,33,933	0/0:18,0:29:47.94:0,48,1225	0/1:11,3:14:45.27:166,0,45	0/1:23,0:20:27.76:28,0,1009	0/0:11,0:11:2.44:0,2,51	0/0:47,0:45:12.51:0,13,456	0/0:6,0:8:2.78:0,3,14	0/0:10,1:14:12.04:0,12,275	0/0:22,8:37:38.73:0,39,817	0/0:12,0:13:5.05:0,5,128	0/1:22,1:31:23.95:24,0,1652	0/1:15,0:15:99:107,0,691	0/0:0,0:2:6.02:0,6,142
chr10	37241546	.	A	ACG	556.25	PASS	AB=0.979;AC=13;AF=0.232;AN=56;BaseQRankSum=3.732;DP=701;FS=0.551;HRun=0;HaplotypeScore=181.5610;InbreedingCoeff=0.1844;MQ=41.24;MQ0=48;MQRankSum=-1.238;QD=2.45;ReadPosRankSum=0.754;VQSLOD=2.1814;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:30:29.61:0,30,228	0/1:8,0:8:17.10:17,0,53	0/0:63,0:8:17.01:0,17,146	0/0:87,0:15:31.60:0,32,276	0/0:24,0:23:38.34:0,38,310	0/0:14,0:13:11.17:0,11,82	0/0:19,0:19:32.64:0,33,238	0/1:47,0:45:43.63:44,0,616	0/0:25,0:25:53.35:0,53,424	0/0:9,0:9:23.59:0,24,184	0/0:8,0:8:8.42:0,8,73	0/0:24,0:24:49.85:0,50,366	0/1:23,3:26:56.06:142,0,56	1/1:20,1:21:5.96:140,6,0	0/0:16,0:15:14.30:0,14,112	0/0:22,0:22:50.69:0,51,404	0/0:28,0:27:53.59:0,54,481	0/0:19,0:19:38.51:0,39,244	0/1:19,0:19:65.30:65,0,146	1/1:14,0:14:4.54:14,5,0	0/1:45,2:46:18.41:141,0,18	0/1:14,0:14:8.65:9,0,12	0/0:13,0:13:20.89:0,21,165	0/0:38,0:38:60.17:0,60,470	1/1:11,0:11:4.75:26,5,0	0/0:31,0:31:83.64:0,84,669	0/1:18,0:17:78.01:111,0,78	0/0:2,0:2:5.96:0,6,45
chr10	37241549	.	C	CGCAT	2445.85	PASS	AB=0.851;AC=12;AF=0.214;AN=56;BaseQRankSum=-6.111;DP=694;FS=2.516;HRun=0;HaplotypeScore=189.5319;InbreedingCoeff=0.0029;MQ=41.71;MQ0=41;MQRankSum=0.620;QD=10.41;ReadPosRankSum=2.825;VQSLOD=3.2471;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:26:23.85:0,24,358	0/1:8,1:9:95.95:122,0,96	0/0:60,0:8:17.29:0,17,289	0/0:87,0:15:38.98:0,39,553	0/0:23,0:22:39.51:0,40,597	0/1:14,0:13:4.11:4,0,148	0/0:18,0:18:22.08:0,22,359	0/1:32,15:46:99:519,0,1060	0/0:24,0:24:56.05:0,56,749	0/0:9,0:9:21.06:0,21,292	0/0:7,0:6:8.95:0,9,145	0/0:23,0:23:49.93:0,50,646	0/1:23,3:26:99:209,0,170	0/1:17,5:22:55.51:407,0,56	0/0:13,0:13:5.98:0,6,96	0/0:20,0:20:48.03:0,48,692	0/0:26,0:26:66.21:0,66,891	0/0:18,0:18:26.52:0,27,280	0/1:19,1:20:99:327,0,281	1/1:10,3:14:2.14:60,2,0	0/1:40,10:49:91.67:349,0,92	0/0:13,0:13:2.53:0,3,46	0/0:16,0:16:30.03:0,30,391	0/0:40,0:40:60.13:0,60,819	1/1:10,2:11:2.89:84,3,0	0/0:31,0:31:87.22:0,87,1187	0/1:11,7:17:99:509,0,146	0/0:2,0:2:6.02:0,6,75
chr10	37241573	.	GACAC	G	2040.78	PASS	AC=8;AF=0.148;AN=54;BaseQRankSum=-3.284;DP=676;FS=3.983;HRun=0;HaplotypeScore=192.7039;InbreedingCoeff=0.8633;MQ=44.15;MQ0=44;MQRankSum=3.035;QD=22.43;ReadPosRankSum=3.438;VQSLOD=3.2322;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:25:25.03:0,25,549	0/0:4,0:9:15.05:0,15,262	0/0:67,0:12:9.50:0,10,198	./.	1/1:8,16:26:26.27:437,26,0	0/0:7,0:17:21.07:0,21,368	0/0:13,0:21:42.14:0,42,785	0/0:31,0:29:12.01:0,12,233	1/1:8,13:21:39.13:632,39,0	0/0:3,0:10:27.09:0,27,483	0/0:3,0:9:14.85:0,15,283	0/0:24,0:25:31.75:0,32,630	0/0:18,0:20:11.91:0,12,115	0/0:13,0:21:20.39:0,20,282	0/0:5,0:18:27.01:0,27,409	1/1:7,9:19:39.12:586,39,0	1/1:11,12:23:21.13:543,21,0	0/0:9,0:25:42.51:0,43,630	0/0:20,0:16:18.03:0,18,338	0/0:13,0:16:17.49:0,17,284	0/0:31,0:39:0.69:0,1,257	0/0:11,0:22:20.07:0,20,335	0/0:12,0:12:15.44:0,15,216	0/0:35,0:39:32.43:0,32,690	0/0:11,0:14:14.46:0,14,195	0/0:22,0:24:57.14:0,57,860	0/0:11,0:17:15.05:0,15,255	0/0:5,0:5:9:0,9,132
chr10	37241711	.	CT	C	2761.05	PASS	AB=0.887;AC=27;AF=0.482;AN=56;BaseQRankSum=6.725;DP=547;FS=2.212;HRun=13;HaplotypeScore=75.5494;InbreedingCoeff=0.7392;MQ=75.89;MQ0=1;MQRankSum=-4.900;QD=9.20;ReadPosRankSum=1.859;VQSLOD=3.2263;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:16,12:31:99:122,0,187	1/1:1,2:4:10.99:72,11,0	0/0:33,1:18:20.96:0,21,168	0/1:35,0:24:8.48:8,0,126	0/0:21,2:23:35.15:0,35,488	0/0:23,2:25:7.24:0,7,385	0/0:14,1:15:14.14:0,14,293	1/1:10,25:36:73.55:529,74,0	0/0:12,0:12:19.18:0,19,273	0/0:17,0:17:33.04:0,33,317	0/0:20,1:21:28.98:0,29,395	0/0:11,0:11:15.47:0,15,139	1/1:7,8:15:17.85:131,18,0	1/1:4,10:15:31.85:225,32,0	0/0:13,1:14:17.20:0,17,318	0/0:16,3:19:4.11:0,4,329	0/1:27,2:31:25.22:25,0,505	0/0:20,1:22:25.94:0,26,389	1/1:4,5:10:16.92:115,17,0	1/1:9,12:21:12.57:255,13,0	1/1:2,12:14:23.82:175,24,0	1/1:3,4:8:13.96:93,14,0	0/0:15,1:16:17.15:0,17,328	0/0:17,1:18:22.82:0,23,356	1/1:7,14:23:48.78:340,49,0	1/1:8,13:22:42.03:293,42,0	1/1:7,13:20:41.74:306,42,0	1/1:0,13:14:40.82:290,41,0
chr10	37241781	.	A	AGAACAAAGAG	13500.08	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-4.198;DP=406;FS=2.595;HRun=0;HaplotypeScore=117.6569;InbreedingCoeff=0.9898;MQ=65.18;MQ0=2;MQRankSum=-12.977;QD=108.00;ReadPosRankSum=-2.446;VQSLOD=4.4942;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:57.20:0,57,1853	1/1:1,5:6:18.06:950,18,0	0/0:13,0:11:30.10:0,30,898	0/0:19,0:13:36.12:0,36,1081	0/0:15,0:15:45.15:0,45,1432	0/0:19,0:19:47.30:0,47,1543	0/0:10,0:10:27.09:0,27,889	1/1:12,3:17:36.02:1286,36,0	0/0:17,0:17:48.16:0,48,1526	0/0:12,0:12:30.10:0,30,958	0/0:20,0:20:57.14:0,57,1674	0/0:6,0:6:18.06:0,18,593	1/1:2,2:4:12.04:540,12,0	1/1:6,8:16:39.13:1973,39,0	0/0:13,0:13:36.12:0,36,1186	0/0:9,0:9:21.07:0,21,625	0/0:27,0:27:75.24:0,75,2281	0/0:18,0:18:45.15:0,45,1482	1/1:3,5:8:24.03:1041,24,0	1/1:8,14:22:63.22:2755,63,0	1/1:6,5:11:30.10:1213,30,0	1/1:3,4:7:21.07:804,21,0	0/0:8,0:8:24.08:0,24,791	0/0:18,0:18:48.16:0,48,1480	1/1:6,10:14:42.14:2071,42,0	0/0:19,0:19:54.17:0,54,1707	1/1:5,6:13:21:867,21,0	0/0:11,0:11:24.08:0,24,745
chr10	37241955	.	A	AAAAG	5870.46	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-7.028;DP=418;FS=26.161;HRun=0;HaplotypeScore=64.9733;InbreedingCoeff=0.9497;MQ=67.15;MQ0=5;MQRankSum=-5.700;QD=44.81;ReadPosRankSum=-1.738;VQSLOD=2.9339;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:31:90.28:0,90,1413	1/1:0,2:2:6.02:150,6,0	0/0:25,0:16:41.71:0,42,437	0/0:18,0:9:16.32:0,16,186	0/0:21,0:21:60.16:0,60,928	0/0:18,0:18:41.93:0,42,636	0/0:11,0:11:32.92:0,33,465	1/1:4,20:25:63.17:1310,63,0	0/0:13,0:13:33.09:0,33,520	0/0:22,0:22:63.16:0,63,885	0/0:16,0:16:48.12:0,48,654	0/0:6,0:6:15.04:0,15,204	1/1:1,6:8:6.02:149,6,0	1/1:0,12:14:24.08:593,24,0	0/0:11,0:11:30.09:0,30,500	0/0:12,0:12:33.06:0,33,478	0/0:21,0:20:63.20:0,63,996	0/0:21,0:21:47.44:0,47,848	1/1:3,13:21:54.09:963,54,0	1/1:1,8:11:10.33:520,10,0	1/1:5,2:7:18.01:244,18,0	1/1:1,6:7:12.04:298,12,0	0/0:8,0:8:24.06:0,24,353	0/0:8,0:8:21.05:0,21,301	1/1:0,17:18:39.13:934,39,0	0/0:17,0:17:51.15:0,51,764	1/1:2,13:17:29.81:709,30,0	0/0:7,0:7:21.07:0,21,350
chr10	37242534	.	G	GA	5672.51	PASS	AB=0.737;AC=23;AF=0.411;AN=56;BaseQRankSum=-11.295;DP=622;FS=0.337;HRun=10;HaplotypeScore=63.7883;InbreedingCoeff=0.7431;MQ=72.08;MQ0=0;MQRankSum=-0.730;QD=20.63;ReadPosRankSum=-0.401;VQSLOD=5.4939;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:38:84.91:0,85,673	1/1:2,8:10:2.43:231,2,0	0/1:11,0:12:8.41:8,0,58	0/0:7,0:8:12.84:0,13,94	0/0:31,0:32:88.90:0,89,714	0/0:22,0:23:55.96:0,56,449	0/0:28,0:29:79.91:0,80,640	1/1:9,23:32:1.69:613,2,0	0/0:19,0:19:41.94:0,42,345	0/0:24,0:24:50.91:0,51,418	0/0:24,0:25:64.94:0,65,519	0/0:22,0:22:50.89:0,51,415	1/1:9,19:28:22.86:633,23,0	1/1:0,17:17:42.10:447,42,0	0/0:16,1:17:12.98:0,13,313	0/0:22,0:22:62.91:0,63,514	0/0:27,0:27:68.87:0,69,558	0/0:18,0:18:29.86:0,30,246	1/1:3,12:15:27.12:361,27,0	0/1:8,12:20:7.15:342,0,7	1/1:1,21:22:54.14:576,54,0	1/1:4,21:25:51.13:544,51,0	0/0:22,0:22:56.92:0,57,468	0/0:21,0:21:50.90:0,51,415	1/1:3,18:21:44.75:480,45,0	0/1:5,12:17:7.24:303,0,7	1/1:8,35:44:82.06:989,82,0	1/1:4,8:12:15:146,15,0
chr10	37242859	.	TA	T	1797.21	PASS	AB=0.761;AC=19;AF=0.339;AN=56;BaseQRankSum=3.836;DP=697;FS=4.585;HRun=14;HaplotypeScore=105.1573;InbreedingCoeff=0.7513;MQ=69.80;MQ0=13;MQRankSum=1.198;QD=9.41;ReadPosRankSum=1.366;VQSLOD=3.0754;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,1:32:19.68:0,20,469	1/1:4,7:12:22.82:147,23,0	0/0:64,0:24:31.55:0,32,190	0/0:75,1:29:26.24:0,26,191	0/0:32,1:34:52.68:0,53,650	0/0:12,0:13:29.85:0,30,258	0/0:12,0:12:24.02:0,24,221	0/1:13,10:22:42.14:179,0,42	0/1:21,1:22:17.18:17,0,372	0/0:26,1:31:26.62:0,27,495	0/0:25,1:27:48.08:0,48,549	0/0:20,0:20:48.02:0,48,434	1/1:5,8:13:29.65:200,30,0	1/1:8,7:15:27.70:178,28,0	0/0:24,1:25:20.50:0,20,477	0/0:30,0:30:32.50:0,32,518	0/0:27,1:30:56.99:0,57,628	0/0:15,0:14:30.02:0,30,274	1/1:6,8:15:6.85:181,7,0	1/1:6,21:27:53.43:369,53,0	1/1:5,3:8:14.48:92,14,0	1/1:3,10:13:26.71:184,27,0	0/0:15,0:18:41.89:0,42,376	0/0:26,0:26:53.83:0,54,473	1/1:5,9:14:4.84:177,5,0	0/0:39,3:42:30.30:0,30,645	0/1:12,17:28:1.99:274,0,2	0/0:8,0:8:15:0,15,134
chr10	37245265	.	CATGTATGA	C	11781.95	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=17.280;DP=720;FS=0.000;HRun=0;HaplotypeScore=178.6685;InbreedingCoeff=0.9992;MQ=56.07;MQ0=1;MQRankSum=-14.532;QD=54.29;ReadPosRankSum=-0.204;VQSLOD=4.3946;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,114,4473	1/1:0,9:9:27.09:754,27,0	0/0:31,0:24:63.22:0,63,2587	0/0:30,0:24:72.22:0,72,2858	0/0:35,0:35:99:0,102,4132	0/0:20,0:20:57.20:0,57,2469	0/0:24,0:24:60.21:0,60,2435	1/1:6,20:21:48.09:912,48,0	0/0:33,0:33:93.30:0,93,3871	0/0:31,0:31:93.32:0,93,3903	0/0:18,0:18:48.15:0,48,1901	0/0:29,0:29:87.30:0,87,3717	1/1:2,19:21:54.18:1459,54,0	1/1:0,20:20:48.16:1319,48,0	0/0:31,0:31:90.31:0,90,3728	0/0:25,0:25:72.25:0,72,3090	0/0:42,0:42:99:0,123,5022	0/0:28,0:28:81.23:0,81,3413	1/1:6,9:15:24.08:637,24,0	1/1:0,27:27:66.23:1737,66,0	1/1:3,18:21:27.09:724,27,0	1/1:1,20:21:48.16:1243,48,0	0/0:32,0:32:96.33:0,96,4063	0/0:20,0:20:57.18:0,57,2365	1/1:2,18:20:39.13:1079,39,0	0/0:21,0:21:63.22:0,63,2761	1/1:3,34:37:72.25:1919,72,0	0/0:11,0:11:27.09:0,27,1118
chr10	37247042	.	A	AACACACACACAC	5432.88	PASS	AB=0.795;AC=39;AF=0.780;AN=50;BaseQRankSum=-2.779;DP=774;FS=2.621;HRun=0;HaplotypeScore=237.9061;InbreedingCoeff=0.3704;MQ=61.32;MQ0=35;MQRankSum=-4.023;QD=10.08;ReadPosRankSum=-4.109;VQSLOD=2.6090;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:40,0:46:0:0,0,0	./.	./.	./.	0/1:15,0:21:2.59:3,0,218	1/1:17,0:27:15.05:356,15,0	1/1:31,0:34:23.09:464,23,0	1/1:19,0:20:5.54:124,6,0	0/0:14,0:23:29.99:0,30,709	1/1:17,0:18:14.41:260,14,0	0/1:14,0:17:30.14:30,0,89	1/1:20,1:28:2.88:156,3,0	1/1:8,2:18:7.38:225,7,0	1/1:17,0:22:5.87:163,6,0	0/1:19,0:28:37.97:70,0,38	0/0:15,0:28:27.09:0,27,510	0/0:24,0:40:34.60:0,35,690	0/1:14,0:18:33.30:156,0,33	1/1:20,0:18:14.55:349,15,0	1/1:11,0:15:6.02:232,6,0	1/1:31,0:39:24.07:545,24,0	1/1:12,0:20:9.03:322,9,0	1/1:22,0:29:8.70:278,9,0	1/1:24,2:30:6.02:274,6,0	1/1:11,3:21:3.01:174,3,0	1/1:23,0:24:30.10:780,30,0	1/1:11,0:15:15.05:392,15,0	1/1:8,0:7:5.38:79,5,0
chr10	37248733	.	GT	G	4969.68	PASS	AB=0.949;AC=29;AF=0.518;AN=56;BaseQRankSum=-9.185;DP=552;FS=0.375;HRun=12;HaplotypeScore=76.1912;InbreedingCoeff=0.9231;MQ=74.38;MQ0=8;MQRankSum=1.697;QD=15.39;ReadPosRankSum=1.947;VQSLOD=5.7641;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:32:74.52:0,75,435	1/1:2,6:8:17.93:139,18,0	0/0:20,0:12:13.19:0,13,102	0/1:34,2:21:25.26:25,0,55	1/1:4,21:25:56.76:441,57,0	0/0:2,0:17:31.25:0,31,157	0/0:3,0:15:28.41:0,28,143	1/1:5,20:26:58.75:443,59,0	1/1:1,17:19:43.87:331,44,0	0/0:9,0:27:66.30:0,66,412	0/0:6,0:18:31.96:0,32,171	0/0:8,0:8:23.92:0,24,226	1/1:1,15:17:43.88:331,44,0	1/1:2,17:19:47.81:371,48,0	0/0:2,0:15:28.47:0,28,144	1/1:2,16:18:44.83:348,45,0	1/1:7,24:31:35.38:457,35,0	0/0:2,0:11:25.57:0,26,128	1/1:8,17:25:55.75:417,56,0	1/1:1,25:26:68.72:534,69,0	1/1:5,13:19:37.81:280,38,0	1/1:3,12:15:29.16:231,29,0	0/0:17,0:17:25.54:0,26,325	0/0:14,0:14:36.07:0,36,363	1/1:6,12:19:40.87:307,41,0	0/0:24,1:25:39.91:0,40,586	1/1:1,15:18:42.55:313,43,0	0/0:10,0:10:30.06:0,30,301
chr10	37249646	.	T	TG	7883.24	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=1.132;DP=314;FS=0.743;HRun=2;HaplotypeScore=42.1867;InbreedingCoeff=0.9356;MQ=51.19;MQ0=9;MQRankSum=-0.346;QD=38.27;ReadPosRankSum=0.936;VQSLOD=4.9926;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,20:21:57.14:770,57,0	1/1:0,4:4:6.02:86,6,0	0/0:25,1:7:14.75:0,15,144	0/0:26,1:9:24.08:0,24,297	0/0:7,0:7:21.07:0,21,260	1/1:0,5:5:15.05:216,15,0	1/1:0,9:9:21.07:302,21,0	1/1:0,16:16:45.15:646,45,0	0/0:7,0:7:21.07:0,21,260	1/1:0,10:10:30.08:413,30,0	1/1:0,7:7:21.07:302,21,0	1/1:1,8:9:27:334,27,0	1/1:0,3:3:9.03:130,9,0	1/1:0,7:7:21.07:302,21,0	1/1:1,5:6:15.05:216,15,0	0/0:8,0:8:24.08:0,24,298	0/0:23,0:23:66.16:0,66,801	1/1:0,21:21:57.15:797,57,0	1/1:1,10:11:30.05:387,30,0	1/1:1,10:11:24.08:346,24,0	1/1:0,17:17:45.11:625,45,0	1/1:0,6:6:18.06:259,18,0	1/1:1,11:12:33.11:457,33,0	1/1:0,13:13:39.13:561,39,0	1/1:0,5:5:12.04:171,12,0	0/0:7,0:7:21.07:0,21,260	1/1:0,13:13:39.13:562,39,0	0/0:2,0:2:6.02:0,6,74
chr10	37249688	.	GTATATATATATATATATATATATATATATATATATATA	G	1231.63	PASS	AB=0.929;AC=5;AF=0.167;AN=30;BaseQRankSum=3.639;DP=163;FS=19.327;HRun=0;HaplotypeScore=153.8572;InbreedingCoeff=0.3048;MQ=60.52;MQ0=5;MQRankSum=-3.547;QD=51.32;ReadPosRankSum=2.294;VQSLOD=1.5099;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:12,0:13:99:173,0,126	./.	./.	0/0:15,0:3:3.48:0,3,47	./.	./.	./.	0/0:6,0:6:6.02:0,6,170	0/0:5,0:5:6.02:0,6,179	0/0:3,0:3:3.48:0,3,75	0/0:3,0:3:3.01:0,3,119	1/1:2,3:5:9.03:866,9,0	./.	./.	./.	0/0:3,0:3:3.01:0,3,38	0/0:18,0:16:23.48:0,23,1922	0/0:18,0:18:33.11:0,33,2786	./.	./.	0/0:3,0:3:6.02:0,6,76	./.	1/1:5,1:6:6.02:293,6,0	./.	0/0:2,0:2:3.01:0,3,48	0/0:3,0:3:6.02:0,6,196	0/0:7,0:7:12.04:0,12,342	./.
chr10	37250087	.	AAAGTTTT	A	16662.46	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=16.657;DP=472;FS=4.806;HRun=0;HaplotypeScore=258.6752;InbreedingCoeff=0.9865;MQ=73.69;MQ0=0;MQRankSum=-17.142;QD=56.87;ReadPosRankSum=4.121;VQSLOD=4.4042;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,13:18:51.11:914,51,0	1/1:0,7:7:21.07:437,21,0	0/0:19,0:18:54.15:0,54,1947	0/0:26,0:24:49.78:0,50,1653	0/0:24,0:24:72.24:0,72,2891	1/1:4,11:15:42.10:758,42,0	1/1:1,9:10:30.08:587,30,0	1/1:0,11:11:33.11:713,33,0	0/0:24,0:24:72.23:0,72,2816	1/1:0,24:24:72.25:1541,72,0	1/1:0,12:12:33.11:679,33,0	1/1:1,25:26:78.24:1585,78,0	1/1:1,19:20:60.21:1246,60,0	1/1:1,19:20:60.21:1242,60,0	1/1:2,21:23:68.43:1347,68,0	0/0:19,0:19:57.20:0,57,2264	0/0:27,0:27:81.24:0,81,2997	1/1:1,8:9:24.08:474,24,0	1/1:1,3:4:12.03:224,12,0	1/1:1,15:16:45.13:894,45,0	1/1:1,6:7:18.06:338,18,0	1/1:0,24:24:66.22:1326,66,0	1/1:1,14:15:42.14:868,42,0	1/1:1,13:14:21.31:395,21,0	1/1:0,4:4:12.04:252,12,0	0/0:29,0:29:87.28:0,87,3309	1/1:1,13:14:42.13:843,42,0	0/0:11,0:11:33.11:0,33,1385
chr10	37250095	.	CAGTCTTAAT	C	19163.26	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=17.096;DP=447;FS=2.061;HRun=0;HaplotypeScore=258.7069;InbreedingCoeff=0.9794;MQ=76.26;MQ0=0;MQRankSum=-17.536;QD=70.45;ReadPosRankSum=6.442;VQSLOD=4.6813;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,13:13:39.13:958,39,0	1/1:0,7:7:21.07:513,21,0	0/0:23,0:22:63.22:0,63,2655	0/0:18,0:18:45.98:0,46,1570	0/0:27,0:27:81.28:0,81,3900	1/1:0,11:11:33.11:805,33,0	1/1:0,9:9:27.09:662,27,0	1/1:0,11:11:33.11:833,33,0	0/0:23,0:23:69.24:0,69,3270	1/1:0,24:24:72.25:1803,72,0	1/1:0,12:12:15.79:779,16,0	1/1:1,24:25:75.26:1834,75,0	1/1:0,19:20:60.21:1467,60,0	1/1:0,20:20:60.21:1461,60,0	1/1:0,21:21:63.22:1545,63,0	0/0:19,0:19:57.20:0,57,2667	0/0:24,0:24:72.25:0,72,3574	1/1:0,8:8:24.08:562,24,0	1/1:0,3:3:9.03:231,9,0	1/1:0,15:15:42.14:1024,42,0	1/1:1,5:6:18.06:400,18,0	1/1:1,22:23:66.23:1566,66,0	1/1:0,14:14:42.14:1021,42,0	1/1:0,13:13:19.70:442,20,0	1/1:0,4:4:12.04:296,12,0	0/0:29,0:29:87.30:0,87,3987	1/1:0,13:13:39.13:961,39,0	0/0:11,0:11:33.11:0,33,1604
chr10	37250845	.	GA	G	6531.38	PASS	AB=0.727;AC=54;AF=0.964;AN=56;BaseQRankSum=-3.276;DP=424;FS=6.042;HRun=8;HaplotypeScore=62.0026;InbreedingCoeff=0.1446;MQ=50.17;MQ0=20;MQRankSum=1.680;QD=15.40;ReadPosRankSum=2.367;VQSLOD=4.8382;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,18:20:36.05:347,36,0	1/1:4,3:6:15.01:139,15,0	1/1:3,2:2:4.76:24,5,0	0/1:4,0:4:3.38:3,0,5	1/1:2,24:26:45.04:428,45,0	1/1:3,17:18:36.01:337,36,0	1/1:9,7:12:21.02:201,21,0	0/1:7,11:18:3.15:256,0,3	1/1:5,10:13:12.02:115,12,0	1/1:3,16:16:39.05:371,39,0	1/1:8,17:24:51.07:491,51,0	1/1:8,6:13:14.79:144,15,0	1/1:3,9:12:27.04:260,27,0	1/1:6,5:11:1.96:68,2,0	1/1:3,9:10:21.03:203,21,0	1/1:2,10:12:23.72:231,24,0	1/1:7,17:24:48.06:459,48,0	1/1:9,13:18:30.03:288,30,0	1/1:4,5:8:15.01:145,15,0	1/1:9,10:17:21.01:202,21,0	1/1:6,5:10:12.01:116,12,0	1/1:4,7:10:15.02:145,15,0	1/1:6,7:13:36.03:340,36,0	1/1:14,7:17:32.91:301,33,0	1/1:4,12:16:33.04:318,33,0	1/1:6,11:17:33.04:318,33,0	1/1:10,6:16:20.60:196,21,0	1/1:3,4:4:9.01:87,9,0
chr10	37250858	.	C	CAA	2318.73	PASS	AB=0.814;AC=25;AF=0.446;AN=56;BaseQRankSum=-0.410;DP=487;FS=1.989;HRun=14;HaplotypeScore=100.3953;InbreedingCoeff=0.5220;MQ=52.27;MQ0=17;MQRankSum=-3.535;QD=10.31;ReadPosRankSum=-3.093;VQSLOD=1.9452;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:22:38.77:0,39,367	1/1:6,3:7:13.51:102,14,0	0/0:13,0:8:6.83:0,7,54	0/1:6,0:5:16.53:17,0,17	0/0:25,0:30:67.73:0,68,562	0/0:22,1:22:0.87:0,1,284	0/0:16,0:14:15.50:0,15,163	1/1:15,4:21:5.21:237,5,0	0/0:8,0:9:1.35:0,1,51	0/0:20,0:19:40.58:0,41,306	0/0:25,0:28:35.27:0,35,399	0/1:11,0:14:25.95:39,0,26	1/1:5,8:18:25.65:232,26,0	1/1:6,2:8:15.02:159,15,0	0/0:12,0:11:17.53:0,18,134	0/1:10,1:12:38.50:39,0,158	0/0:26,0:28:63.42:0,63,555	0/0:22,0:20:44.89:0,45,376	0/1:7,6:12:3.73:142,0,4	1/1:7,12:20:39.97:431,40,0	1/1:5,3:10:8.39:87,8,0	1/1:5,9:15:29.91:323,30,0	1/1:11,1:17:4.75:97,5,0	0/1:15,0:16:1.34:57,0,1	1/1:11,10:23:0.66:217,1,0	0/0:23,0:23:16.84:0,17,98	1/1:10,3:15:29.40:333,29,0	0/0:9,0:6:7.29:0,7,33
chr10	37250872	.	ATAGT	A	1022.17	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=1.023;DP=471;FS=1.755;HRun=0;HaplotypeScore=110.8358;InbreedingCoeff=0.9382;MQ=61.48;MQ0=3;MQRankSum=-4.520;QD=32.97;ReadPosRankSum=-0.072;VQSLOD=3.7499;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:48.16:0,48,1164	0/0:11,0:10:27.09:0,27,604	0/0:15,0:10:26.95:0,27,584	0/0:10,0:8:21.05:0,21,324	0/0:31,0:31:84.29:0,84,1998	0/0:24,0:24:54.19:0,54,1285	0/0:19,0:19:48.16:0,48,1096	0/0:15,0:15:36.12:0,36,781	0/0:8,0:8:15.05:0,15,327	0/0:19,0:19:54.11:0,54,1178	0/0:28,0:28:78.26:0,78,1808	0/0:14,0:14:36.11:0,36,747	0/0:18,0:18:29.91:0,30,654	0/0:6,0:6:18.06:0,18,383	0/0:11,0:11:24.08:0,24,576	0/0:11,0:11:33.11:0,33,757	0/0:32,0:32:84.29:0,84,2025	0/0:23,0:23:57.20:0,57,1354	0/0:11,0:11:27.09:0,27,606	0/0:19,0:19:54.19:0,54,1172	0/0:7,0:7:9.03:0,9,195	0/0:16,0:16:39.13:0,39,825	0/0:20,0:20:54.18:0,54,1131	0/0:19,0:18:48.16:0,48,1063	0/0:20,0:20:42.14:0,42,937	1/1:4,17:24:57.15:928,57,0	0/0:13,0:13:36.12:0,36,774	1/1:0,6:7:12.04:211,12,0
chr10	37252188	.	GCTGTA	G	11914.83	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=17.286;DP=685;FS=0.313;HRun=0;HaplotypeScore=129.3144;InbreedingCoeff=0.9987;MQ=83.75;MQ0=0;MQRankSum=-8.155;QD=50.92;ReadPosRankSum=1.106;VQSLOD=4.9605;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,150,4562	1/1:0,16:16:36.12:770,36,0	0/0:30,0:29:86.96:0,87,2504	0/0:14,0:14:36.05:0,36,914	0/0:29,0:29:87.30:0,87,2764	0/0:16,0:16:45.14:0,45,1380	0/0:22,0:22:63.19:0,63,1836	1/1:4,33:37:99:1978,99,0	0/0:18,0:18:54.17:0,54,1634	0/0:35,0:35:99:0,105,3348	0/0:19,0:19:57.20:0,57,1763	0/0:24,0:24:72.25:0,72,2300	1/1:0,31:31:75.26:1653,75,0	1/1:0,27:27:69.24:1535,69,0	0/0:26,0:26:75.24:0,75,2296	0/0:30,0:30:90.31:0,90,2802	0/0:29,0:29:87.28:0,87,2692	0/0:27,0:27:81.26:0,81,2543	1/1:1,12:14:39.12:758,39,0	1/1:1,22:23:48.12:1019,48,0	1/1:2,18:20:21.07:468,21,0	1/1:0,23:23:57.67:1262,58,0	0/0:22,0:22:66.23:0,66,2075	0/0:30,0:30:90.31:0,90,2838	1/1:0,18:18:48.16:1069,48,0	0/0:22,0:22:66.22:0,66,2064	1/1:2,23:25:63.22:1404,63,0	0/0:7,0:7:21.07:0,21,678
chr10	37252786	.	G	GAGCAAAA	19937.66	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-11.862;DP=533;FS=0.700;HRun=0;HaplotypeScore=108.6021;InbreedingCoeff=0.9888;MQ=62.01;MQ0=0;MQRankSum=-16.330;QD=97.73;ReadPosRankSum=0.209;VQSLOD=5.8246;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,99,2465	1/1:3,9:13:27.09:1028,27,0	0/0:10,0:10:27.06:0,27,609	0/0:7,0:7:17.97:0,18,288	0/0:27,0:27:78.25:0,78,1974	0/0:23,0:23:69.23:0,69,1675	0/0:18,0:18:51.16:0,51,1212	1/1:8,24:34:99:3368,99,0	0/0:16,0:16:42.14:0,42,1079	0/0:12,0:12:36.11:0,36,880	0/0:28,0:28:78.26:0,78,1938	0/0:12,0:12:30.09:0,30,737	1/1:0,9:11:21.07:844,21,0	1/1:4,12:17:36.12:1388,36,0	0/0:22,0:22:63.21:0,63,1610	0/0:15,0:15:45.14:0,45,1069	0/0:19,0:19:54.19:0,54,1424	0/0:25,0:25:66.23:0,66,1707	1/1:6,19:26:75.24:2743,75,0	1/1:1,32:34:96.33:3603,96,0	1/1:1,3:4:9.03:362,9,0	1/1:3,9:13:39.09:1346,39,0	0/0:17,0:17:48.16:0,48,1102	0/0:15,0:15:45.15:0,45,1156	1/1:5,19:24:60.21:2130,60,0	0/0:16,0:16:48.16:0,48,1173	1/1:0,25:27:78.27:3125,78,0	0/0:12,0:12:24.08:0,24,603
chr10	37253656	.	AAGGCAGAAGC	A	3842.70	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=10.643;DP=681;FS=11.095;HRun=0;HaplotypeScore=198.9619;InbreedingCoeff=0.9939;MQ=70.29;MQ0=1;MQRankSum=-10.881;QD=54.12;ReadPosRankSum=0.959;VQSLOD=2.5037;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,133,6491	0/0:6,0:6:15.05:0,15,750	0/0:27,0:25:69.24:0,69,3167	0/0:23,0:23:51.14:0,51,2198	0/0:27,0:27:75.24:0,75,3699	0/0:17,0:17:45.15:0,45,2193	0/0:23,0:23:57.20:0,57,2824	0/0:24,0:24:60.20:0,60,2869	0/0:23,0:23:57.20:0,57,2843	0/0:22,0:22:63.22:0,63,3017	0/0:21,0:21:50.54:0,51,2357	1/1:9,19:28:51.17:1542,51,0	0/0:27,0:27:78.27:0,78,3786	0/0:22,0:22:60.21:0,60,3070	0/0:38,0:38:99:0,105,5372	0/0:21,0:21:60.21:0,60,3028	0/0:31,0:31:90.29:0,90,4215	0/0:24,0:24:57.17:0,57,2739	0/0:27,0:27:75.25:0,75,3324	0/0:26,0:26:66.23:0,66,3389	0/0:40,0:40:99:0,114,5673	0/0:21,0:21:60.19:0,60,2894	1/1:4,20:24:50.92:1497,51,0	1/1:8,11:19:27.09:804,27,0	0/0:15,0:15:42.14:0,42,2103	0/0:20,0:20:57.20:0,57,2846	0/0:26,0:26:72.25:0,72,3511	0/0:12,0:12:36.09:0,36,1635
chr10	37254071	.	A	AACACAC	4943.87	PASS	AB=0.820;AC=46;AF=0.852;AN=54;BaseQRankSum=1.388;DP=614;FS=7.943;HRun=0;HaplotypeScore=188.8167;InbreedingCoeff=0.3651;MQ=55.25;MQ0=14;MQRankSum=-3.363;QD=9.21;ReadPosRankSum=-2.622;VQSLOD=2.7378;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:33,0:32:14.95:194,15,0	1/1:11,0:11:6.01:142,6,0	0/1:41,0:12:0:0,0,0	./.	0/1:8,0:20:40.62:41,0,57	1/1:31,0:30:8.94:164,9,0	1/1:33,0:33:2.93:48,3,0	1/1:27,0:27:40.64:616,41,0	0/0:5,0:13:7.02:0,7,50	1/1:31,0:31:48.13:886,48,0	1/1:16,0:14:6.02:72,6,0	1/1:30,0:30:17.70:220,18,0	1/1:17,0:15:14.93:226,15,0	1/1:26,0:27:11.84:165,12,0	1/1:7,0:10:2.88:15,3,0	0/1:8,0:17:14.53:15,0,20	0/0:16,0:34:12.41:0,12,136	1/1:14,0:14:17.91:302,18,0	1/1:16,0:15:11.16:207,11,0	1/1:12,0:12:2.96:28,3,0	1/1:27,0:27:8.57:106,9,0	1/1:17,0:17:9.02:142,9,0	1/1:15,0:16:5.99:95,6,0	0/1:23,0:21:0.09:0,0,0	1/1:20,0:22:8.90:114,9,0	1/1:13,1:20:38.14:703,38,0	1/1:15,0:15:12.04:241,12,0	1/1:11,0:10:12.02:202,12,0
chr10	37254108	.	ACGCACG	A	144.96	PASS	AB=0.975;AC=12;AF=0.214;AN=56;BaseQRankSum=5.334;DP=579;FS=32.994;HRun=0;HaplotypeScore=143.8074;InbreedingCoeff=-0.1276;MQ=44.10;MQ0=17;MQRankSum=-1.527;QD=0.66;ReadPosRankSum=-3.040;VQSLOD=0.0152;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:25,2:26:5.28:5,0,908	0/1:13,0:13:10.76:11,0,107	0/0:21,0:7:18.06:0,18,510	0/0:20,0:2:5.99:0,6,59	0/0:24,0:24:63.22:0,63,2202	0/1:27,1:27:4.30:4,0,923	0/0:28,0:27:18.57:0,19,588	0/0:29,0:28:57.71:0,58,1128	0/0:21,0:21:57.20:0,57,2000	0/1:24,1:25:99:107,0,1476	0/0:13,0:12:17.89:0,18,576	0/0:25,0:26:39.41:0,39,1319	0/1:17,0:15:7.13:7,0,205	0/0:24,0:24:4.51:0,5,402	0/0:11,0:11:6.89:0,7,751	0/0:16,0:16:33.58:0,34,1207	0/0:34,0:34:62.94:0,63,1988	0/1:14,1:15:30.29:30,0,950	0/0:15,0:15:37:0,37,719	0/0:12,0:12:5.63:0,6,59	1/1:27,0:26:3.47:11,3,0	0/1:17,0:17:18.89:19,0,49	0/1:17,0:15:27.19:27,0,520	0/0:24,0:19:18.06:0,18,609	0/1:26,0:26:33.52:34,0,57	0/0:27,0:27:71.27:0,71,2469	0/0:12,0:12:11.91:0,12,275	0/1:8,0:8:29.77:30,0,528
chr10	37254114	.	G	GCACGCACA	3917.27	PASS	AB=0.560;AC=15;AF=0.278;AN=54;BaseQRankSum=-3.145;DP=606;FS=4.222;HRun=0;HaplotypeScore=155.5971;InbreedingCoeff=0.7374;MQ=46.11;MQ0=16;MQRankSum=-7.326;QD=21.52;ReadPosRankSum=-2.968;VQSLOD=2.7598;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:25:33.51:0,34,656	1/1:11,1:12:5.93:127,6,0	0/0:26,0:12:32.94:0,33,366	0/0:21,0:6:10.20:0,10,54	0/0:25,0:25:66.17:0,66,1533	0/0:30,0:29:18.99:0,19,596	0/0:22,0:21:16.88:0,17,382	1/1:27,0:26:62.70:1045,63,0	0/0:22,0:22:57.07:0,57,1252	0/0:24,0:24:34.58:0,35,962	0/0:14,0:13:23.98:0,24,409	0/0:26,0:26:41.89:0,42,786	0/1:5,13:18:12.06:329,0,12	1/1:3,19:27:21:614,21,0	0/0:12,0:12:24.05:0,24,518	0/0:17,0:17:33.11:0,33,796	0/0:28,0:28:56.98:0,57,1154	0/0:15,0:14:22.74:0,23,616	1/1:4,17:23:57.12:1185,57,0	0/1:1,12:15:6.58:81,0,7	./.	0/1:5,10:16:0:0,0,0	0/0:19,0:17:21.48:0,21,325	0/0:26,0:20:20.72:0,21,302	1/1:6,17:29:6.02:154,6,0	0/0:29,0:29:21.47:0,21,1563	1/1:1,11:13:9.03:382,9,0	0/0:10,0:10:11.93:0,12,373
chr10	37255264	.	CA	C	580.18	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=-1.882;DP=475;FS=8.290;HRun=12;HaplotypeScore=80.8371;InbreedingCoeff=0.2671;MQ=57.84;MQ0=2;MQRankSum=0.322;QD=4.53;ReadPosRankSum=2.399;VQSLOD=1.3695;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:57.67:0,58,581	0/1:7,0:7:20.01:20,0,22	0/0:13,0:10:24.04:0,24,235	0/0:8,0:6:12.27:0,12,94	0/0:15,1:18:21.46:0,21,358	0/0:26,0:26:7.46:0,7,434	0/0:13,0:12:13.12:0,13,192	0/1:43,0:43:19.42:19,0,472	0/0:16,1:19:18.52:0,19,322	0/0:21,0:19:34.59:0,35,307	0/0:11,0:11:26.47:0,26,233	0/0:7,0:7:5.38:0,5,59	0/1:8,0:7:6.29:6,0,73	0/1:9,0:9:18.50:19,0,85	0/1:14,0:14:1.77:2,0,218	0/0:13,0:13:27.05:0,27,274	0/0:31,1:32:47.89:0,48,674	0/0:10,0:10:0.37:0,0,124	0/0:18,0:16:42.69:0,43,366	0/0:15,0:13:8.01:0,8,180	0/0:8,0:8:11.18:0,11,65	0/0:16,0:14:12.36:0,12,211	0/0:12,0:11:17.88:0,18,104	0/0:11,0:11:5.45:0,5,46	0/0:20,0:20:26.31:0,26,341	1/1:9,15:24:11.37:271,11,0	0/0:25,0:24:27.85:0,28,463	1/1:3,19:23:51.88:383,52,0
chr10	37255423	.	G	GGTGT	2017.65	PASS	AB=1.000;AC=39;AF=0.813;AN=48;BaseQRankSum=-1.212;DP=546;FS=2.111;HRun=0;HaplotypeScore=150.5618;InbreedingCoeff=0.2800;MQ=60.70;MQ0=7;MQRankSum=0.199;QD=4.87;ReadPosRankSum=-0.690;VQSLOD=2.6591;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:36,0:34:2.53:49,3,0	1/1:9,0:9:3.01:60,3,0	./.	0/1:28,0:19:0:0,0,0	1/1:12,0:12:2.53:41,3,0	1/1:20,0:20:9.03:134,9,0	1/1:22,0:22:8.96:90,9,0	1/1:28,0:28:13.78:100,14,0	1/1:21,0:21:15.36:220,15,0	1/1:23,0:23:23.25:320,23,0	./.	1/1:9,0:8:2.67:37,3,0	1/1:18,0:16:3.01:68,3,0	0/1:16,0:16:0.01:0,0,0	1/1:22,0:22:3.01:49,3,0	1/1:20,0:19:21.36:227,21,0	1/1:21,8:30:6.02:107,6,0	1/1:14,0:14:12.04:193,12,0	1/1:23,0:20:3.48:40,3,0	1/1:15,0:15:6.02:119,6,0	./.	0/0:18,0:16:1.23:0,1,3	1/1:11,0:11:6.02:86,6,0	1/1:23,0:23:5.93:77,6,0	./.	0/0:15,0:20:3.47:0,3,29	0/1:13,0:13:10.95:112,0,11	0/0:10,0:14:3:0,3,28
chr10	37255454	.	G	GTA	302.83	PASS	AB=0.978;AC=13;AF=0.232;AN=56;BaseQRankSum=1.449;DP=589;FS=0.586;HRun=0;HaplotypeScore=144.8206;InbreedingCoeff=-0.1386;MQ=43.41;MQ0=22;MQRankSum=0.542;QD=1.19;ReadPosRankSum=4.082;VQSLOD=2.5600;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:39,0:37:49.94:50,0,109	0/0:7,0:7:10.92:0,11,64	0/0:29,0:8:23.89:0,24,206	0/0:25,0:11:24.02:0,24,240	0/0:11,0:11:1.15:0,1,105	0/1:23,1:24:34.92:35,0,175	0/1:25,0:25:29.62:30,0,175	0/0:21,0:21:20.99:0,21,332	0/1:22,0:22:8.08:8,0,203	0/1:22,1:23:39.92:40,0,257	0/1:14,0:13:37.62:55,0,38	0/1:10,0:9:0.20:0,0,19	0/0:13,0:11:3.30:0,3,81	0/0:21,0:21:14.33:0,14,92	0/1:24,1:25:30.37:30,0,142	0/1:20,0:19:21.56:22,0,148	0/0:41,0:39:53.85:0,54,417	0/1:18,3:21:7.05:155,0,7	0/0:16,0:15:9.29:0,9,190	0/1:16,0:16:3.05:3,0,61	0/0:25,0:24:12.40:0,12,89	0/0:25,0:23:14.93:0,15,120	1/1:15,0:14:4.53:17,5,0	0/0:32,0:32:14.60:0,15,136	0/0:11,0:10:3:0,3,25	0/0:22,0:22:12.48:0,12,391	0/0:22,0:22:35.89:0,36,263	0/0:14,0:13:23.86:0,24,179
chr10	37255461	.	T	TGC	1458.85	PASS	AB=0.971;AC=21;AF=0.375;AN=56;BaseQRankSum=11.187;DP=584;FS=1.548;HRun=0;HaplotypeScore=147.3702;InbreedingCoeff=-0.2290;MQ=44.26;MQ0=20;MQRankSum=-1.603;QD=3.81;ReadPosRankSum=4.670;VQSLOD=2.6223;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:40,0:39:58.18:162,0,58	0/0:7,0:7:7.95:0,8,44	0/0:30,0:11:30.01:0,30,298	0/0:23,0:11:30.07:0,30,327	0/0:12,0:12:2.08:0,2,98	0/1:22,0:22:12.24:185,0,12	1/1:23,0:23:16.57:299,17,0	0/1:22,0:22:99:135,0,131	0/1:21,0:21:9.61:10,0,183	0/1:24,0:24:99:190,0,121	0/1:14,0:14:49.97:50,0,79	0/1:13,0:13:11.96:12,0,19	0/1:15,0:13:24.50:62,0,24	0/1:22,0:22:17.45:17,0,53	1/1:24,0:24:1.94:162,2,0	0/1:19,0:18:25.04:25,0,122	0/0:40,0:38:51.98:0,52,404	0/1:6,18:26:44.91:70,0,45	0/1:9,0:9:39.13:39,0,50	0/1:20,0:20:3.01:3,0,62	0/0:20,0:20:6.44:0,6,47	0/0:26,0:24:11.94:0,12,96	1/1:14,0:13:5.97:44,6,0	0/1:31,0:31:35.17:35,0,97	0/0:14,0:13:2.94:0,3,18	0/0:18,0:18:47.75:0,48,379	0/1:24,0:24:72.23:120,0,72	0/0:11,0:10:14.94:0,15,117
chr10	37255465	.	T	TGCGTGC	4268.20	PASS	AB=0.952;AC=22;AF=0.393;AN=56;BaseQRankSum=4.642;DP=578;FS=6.957;HRun=0;HaplotypeScore=169.4459;InbreedingCoeff=-0.1159;MQ=45.97;MQ0=18;MQRankSum=-2.710;QD=11.20;ReadPosRankSum=3.667;VQSLOD=3.1970;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:38,0:37:99:366,0,129	0/1:6,0:6:3.12:3,0,66	0/0:31,0:13:36.09:0,36,636	0/0:22,0:11:33.11:0,33,677	0/0:12,0:12:17.55:0,18,251	0/1:20,1:22:60.68:466,0,61	1/1:24,0:24:15.67:620,16,0	0/1:21,0:21:99:356,0,128	0/0:21,0:21:7.11:0,7,303	0/1:23,0:24:99:553,0,166	0/1:13,0:13:54.40:124,0,54	1/1:1,0:15:3.08:87,3,0	0/1:15,0:13:4.02:164,0,4	0/1:22,0:23:70.82:71,0,91	1/1:22,0:23:3.08:382,3,0	0/0:18,0:17:35.08:0,35,346	0/0:39,0:37:53.47:0,53,738	0/1:24,0:27:99:270,0,117	0/1:10,0:10:56.83:120,0,57	0/1:22,0:22:6.02:6,0,63	0/0:17,0:17:3.14:0,3,21	0/1:27,0:25:8.09:8,0,58	1/1:1,1:15:6.02:174,6,0	0/1:10,15:32:75.83:181,0,76	0/0:14,0:13:3.01:0,3,49	0/0:15,0:15:37.64:0,38,550	0/1:23,0:23:43.69:317,0,44	0/0:8,0:8:15.05:0,15,244
chr10	37255474	.	AAAGG	A	2048.82	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=3.497;DP=438;FS=13.847;HRun=0;HaplotypeScore=114.8928;InbreedingCoeff=0.8889;MQ=55.79;MQ0=16;MQRankSum=-8.441;QD=19.15;ReadPosRankSum=-1.677;VQSLOD=1.9210;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:76.41:0,76,1705	0/1:1,0:1:0:0,0,0	0/0:32,0:14:39.05:0,39,952	0/0:26,0:15:45.15:0,45,1139	0/0:11,0:11:27.05:0,27,701	0/0:22,0:22:60.21:0,60,1531	0/0:20,0:20:58.44:0,58,1474	1/1:4,9:13:27.09:485,27,0	0/0:17,0:17:36.12:0,36,929	0/0:20,0:20:60.21:0,60,1527	0/0:9,0:9:27.09:0,27,663	0/0:11,0:11:5.68:0,6,131	1/1:1,8:9:18.03:290,18,0	1/1:0,14:14:13.25:233,13,0	0/0:13,0:13:36.12:0,36,907	0/0:15,0:15:33.11:0,33,840	0/0:22,0:21:54.66:0,55,1392	0/0:23,0:23:11.99:0,12,295	1/1:2,6:8:21.03:343,21,0	1/1:1,12:13:8.90:60,9,0	1/1:1,9:10:11.83:77,12,0	1/1:0,15:15:8.94:94,9,0	0/0:13,0:12:8.66:0,9,202	0/0:25,0:25:9.03:0,9,234	1/1:0,7:7:7.13:57,7,0	0/0:16,0:15:36.12:0,36,895	1/1:1,16:17:36.08:612,36,0	0/0:7,0:7:15.05:0,15,377
chr10	37255576	.	CAAAT	C	7720.28	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=13.833;DP=589;FS=23.330;HRun=0;HaplotypeScore=100.2183;InbreedingCoeff=0.9995;MQ=80.56;MQ0=0;MQRankSum=-8.718;QD=42.89;ReadPosRankSum=2.957;VQSLOD=3.1514;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:95.11:0,95,2307	1/1:2,8:10:24.08:455,24,0	0/0:24,0:24:57.66:0,58,1439	0/0:19,0:19:54.07:0,54,1135	0/0:18,0:18:51.17:0,51,1297	0/0:26,0:26:75.26:0,75,1975	0/0:24,0:24:72.23:0,72,1743	1/1:4,18:22:51:864,51,0	0/0:28,0:28:78.27:0,78,1973	0/0:24,0:24:71.92:0,72,1847	0/0:21,0:21:54.18:0,54,1384	0/0:21,0:21:63.10:0,63,1385	1/1:2,16:19:42.14:795,42,0	1/1:0,24:24:48.01:908,48,0	0/0:24,0:24:66.23:0,66,1716	0/0:27,0:27:78.26:0,78,1996	0/0:20,0:19:51.18:0,51,1374	0/0:20,0:20:57.19:0,57,1387	1/1:0,13:13:33.08:552,33,0	1/1:1,12:12:30.02:528,30,0	1/1:1,25:26:62.76:994,63,0	1/1:2,20:22:60.03:1033,60,0	0/0:16,0:16:45.13:0,45,1120	0/0:24,0:24:69.22:0,69,1761	1/1:0,20:20:51.17:966,51,0	0/0:26,0:26:75.26:0,75,1946	1/1:0,10:11:33.11:626,33,0	0/0:11,0:11:33.11:0,33,890
chr10	37256595	.	T	TA	585.44	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-5.474;DP=413;FS=3.122;HRun=7;HaplotypeScore=37.9391;InbreedingCoeff=0.9563;MQ=73.46;MQ0=0;MQRankSum=-1.019;QD=23.42;ReadPosRankSum=0.204;VQSLOD=2.9983;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:32:86.17:0,86,817	0/0:10,0:10:24.04:0,24,232	0/0:10,0:11:24.02:0,24,226	0/0:5,0:5:12.01:0,12,113	0/0:21,0:21:57.09:0,57,550	0/0:21,0:21:60.08:0,60,573	0/0:7,0:7:21.02:0,21,197	0/0:36,0:36:84.10:0,84,803	0/0:18,0:18:54.07:0,54,515	0/0:22,0:22:57.09:0,57,550	0/0:21,0:21:57.09:0,57,550	1/1:1,7:8:15.05:181,15,0	0/0:5,0:5:15.02:0,15,145	0/0:7,0:7:18.02:0,18,174	0/0:7,0:7:21.03:0,21,203	0/0:10,0:10:30.05:0,30,290	0/0:23,0:22:63.10:0,63,608	0/0:12,0:12:33.05:0,33,319	0/0:20,0:20:42.05:0,42,406	0/0:16,0:16:48.08:0,48,463	0/0:4,0:4:12.02:0,12,116	0/0:7,0:7:21.03:0,21,199	1/1:1,9:10:24.07:290,24,0	1/1:0,7:7:21.06:254,21,0	0/0:18,0:18:51.08:0,51,492	0/0:22,0:23:60.06:0,60,567	0/0:16,0:15:45.02:0,45,425	0/0:16,0:16:48.08:0,48,463
chr10	37257713	.	GCT	G	841.59	PASS	AB=0.992;AC=17;AF=0.304;AN=56;BaseQRankSum=12.275;DP=720;FS=3.239;HRun=0;HaplotypeScore=150.3910;InbreedingCoeff=0.5350;MQ=65.15;MQ0=11;MQRankSum=-13.087;QD=3.07;ReadPosRankSum=-0.866;VQSLOD=2.8301;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:35.81:0,36,434	1/1:16,0:16:22.13:100,22,0	0/0:29,0:15:12.51:0,13,173	0/0:49,0:22:20.99:0,21,218	0/0:23,0:23:37.09:0,37,849	0/0:18,0:18:27.07:0,27,383	0/0:26,0:26:24.06:0,24,351	0/1:31,0:31:12.72:17,0,13	0/0:31,0:31:81.26:0,81,1269	0/0:26,1:27:18.96:0,19,706	0/1:23,1:24:47.39:47,0,224	0/0:21,1:22:22.99:0,23,861	1/1:28,0:28:41.15:188,41,0	1/1:18,0:18:27.98:131,28,0	0/0:25,0:25:41.96:0,42,545	0/0:23,0:23:63.18:0,63,981	0/0:30,0:30:84.25:0,84,1330	0/0:15,0:15:21.07:0,21,291	0/1:20,0:20:24.68:25,0,90	0/1:27,0:27:18.87:151,0,19	1/1:31,0:31:3.48:22,3,0	0/1:21,0:21:38.65:43,0,39	0/0:21,1:22:22.99:0,23,865	0/0:38,0:38:87.26:0,87,1356	1/1:24,0:24:41.50:190,42,0	0/0:27,0:27:69.22:0,69,1087	1/1:34,0:34:9.57:116,10,0	0/0:6,0:6:15.03:0,15,221
chr10	37257720	.	CTCTCTCTCTG	C	9517.67	PASS	AB=0.581;AC=19;AF=0.339;AN=56;BaseQRankSum=11.552;DP=772;FS=4.770;HRun=0;HaplotypeScore=211.2013;InbreedingCoeff=0.8488;MQ=64.78;MQ0=15;MQRankSum=-9.291;QD=39.17;ReadPosRankSum=-1.536;VQSLOD=3.7335;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:36.12:0,36,846	1/1:2,14:16:24.08:753,24,0	0/0:28,0:12:6.23:0,6,132	0/0:62,0:26:1.33:0,1,397	0/0:23,0:23:16.90:0,17,2422	0/0:21,0:21:27.03:0,27,619	0/0:29,0:29:36.12:0,36,1221	1/1:3,27:30:80.99:1270,81,0	0/0:32,0:32:84.28:0,84,3029	0/0:36,0:36:85.68:0,86,2708	0/0:29,0:29:33.09:0,33,625	0/0:24,0:24:63.21:0,63,2767	1/1:2,25:27:45.15:1382,45,0	1/1:2,17:19:30.10:947,30,0	0/0:35,0:35:45.15:0,45,1182	0/0:26,0:26:66.22:0,66,3101	0/0:32,0:32:93.19:0,93,4015	0/0:16,0:16:20.98:0,21,530	1/1:7,11:18:33.02:639,33,0	1/1:6,22:28:48.16:1483,48,0	0/1:7,18:25:43.41:180,0,43	1/1:5,16:21:5.12:459,5,0	0/0:22,0:22:57.18:0,57,2591	0/0:35,0:35:81.28:0,81,3962	1/1:5,22:27:45.15:1391,45,0	0/0:26,0:26:69.22:0,69,3055	1/1:7,25:32:33.11:1015,33,0	0/0:6,0:6:15.05:0,15,766
chr10	37258314	.	C	CA	8122.59	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-15.753;DP=608;FS=7.365;HRun=5;HaplotypeScore=54.0316;InbreedingCoeff=0.9988;MQ=73.41;MQ0=1;MQRankSum=-1.753;QD=33.99;ReadPosRankSum=-1.268;VQSLOD=4.6423;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,135,1450	1/1:1,11:12:36.09:456,36,0	0/0:18,0:16:28.88:0,29,387	0/0:19,0:18:38.54:0,39,374	0/0:28,0:28:84.17:0,84,885	0/0:25,0:25:66.16:0,66,709	0/0:17,0:17:36.07:0,36,378	1/1:9,28:37:81.25:1051,81,0	0/0:15,0:15:39.10:0,39,419	0/0:20,0:20:60.15:0,60,645	0/0:28,0:28:81.19:0,81,863	0/0:13,0:13:33.08:0,33,355	1/1:1,19:20:48.16:631,48,0	1/1:3,27:30:75.24:987,75,0	0/0:15,0:14:42.10:0,42,451	0/0:11,0:11:33.08:0,33,355	0/0:25,0:24:69.17:0,69,742	0/0:22,0:22:63.16:0,63,676	1/1:0,19:19:57.14:715,57,0	1/1:0,31:31:93.30:1224,93,0	1/1:0,19:19:51.17:671,51,0	1/1:2,13:15:36.07:454,36,0	0/0:15,0:15:36.09:0,36,387	0/0:9,0:9:24.04:0,24,250	1/1:3,18:21:48.16:632,48,0	0/0:35,0:35:90.22:0,90,968	1/1:0,35:35:99:1303,99,0	0/0:8,0:8:21.05:0,21,226
chr10	37258713	.	C	CA	4114.96	PASS	AB=0.577;AC=19;AF=0.339;AN=56;BaseQRankSum=10.035;DP=570;FS=4.499;HRun=11;HaplotypeScore=75.6912;InbreedingCoeff=0.8860;MQ=70.76;MQ0=0;MQRankSum=0.793;QD=20.07;ReadPosRankSum=-0.781;VQSLOD=4.4005;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,1:25:36.39:0,36,445	1/1:0,9:9:27.05:274,27,0	0/0:10,0:10:5.31:0,5,37	0/0:16,0:15:23.79:0,24,176	0/0:20,0:21:43.85:0,44,331	0/0:27,0:28:67.76:0,68,517	0/0:21,0:21:45.67:0,46,348	1/1:4,17:21:22.38:397,22,0	0/0:20,0:22:54.87:0,55,406	0/0:22,0:24:48.88:0,49,360	0/0:17,0:19:51.89:0,52,383	0/0:22,0:22:47.44:0,47,368	1/1:5,10:16:6.82:250,7,0	1/1:4,15:19:33.07:335,33,0	0/0:23,0:23:49.84:0,50,377	0/0:15,0:17:36.92:0,37,267	0/0:27,0:27:74.66:0,75,576	0/0:18,0:19:31.82:0,32,234	1/1:5,10:15:30.52:300,31,0	1/1:4,17:21:57.07:569,57,0	0/1:4,11:15:19.42:186,0,19	1/1:3,14:17:34.41:341,34,0	0/0:17,0:18:37.85:0,38,284	0/0:14,0:14:35.84:0,36,279	1/1:5,15:21:53.78:516,54,0	0/0:31,0:31:68.70:0,69,532	1/1:12,38:50:80.77:947,81,0	0/0:7,0:7:14.92:0,15,116
chr10	37259311	.	GGTGTGTGTGTGTGTGTGT	G	4621.40	PASS	AB=0.740;AC=14;AF=0.259;AN=54;BaseQRankSum=6.109;DP=524;FS=18.058;HRun=0;HaplotypeScore=227.6151;InbreedingCoeff=0.6211;MQ=53.09;MQ0=17;MQRankSum=-6.955;QD=29.07;ReadPosRankSum=1.147;VQSLOD=2.1514;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:21,10:31:24.08:1094,24,0	0/0:13,0:12:4.74:0,5,293	./.	0/0:12,0:7:3.01:0,3,42	0/0:22,0:25:57.67:0,58,3777	0/1:15,5:21:20.29:917,0,20	1/1:12,8:20:9.03:421,9,0	0/0:28,0:27:27.09:0,27,909	0/0:21,0:21:51.18:0,51,3243	1/1:9,5:15:18.04:589,18,0	1/1:9,7:15:14.89:619,15,0	0/0:11,0:18:15.52:0,16,965	0/0:11,0:11:12.93:0,13,664	0/0:16,0:15:6.02:0,6,335	1/1:9,5:13:12.04:568,12,0	0/0:17,0:17:36.12:0,36,2762	0/0:30,0:33:52.42:0,52,3221	1/1:13,2:15:9.01:310,9,0	0/0:27,0:27:42.14:0,42,1843	0/0:19,0:19:6.02:0,6,348	0/0:12,0:12:18.06:0,18,972	0/0:17,0:16:6.02:0,6,283	0/0:6,0:10:3.01:0,3,196	0/0:18,0:28:15.05:0,15,626	0/0:14,0:14:9.03:0,9,343	0/1:16,1:24:99:104,0,745	0/0:16,0:16:20.66:0,21,795	0/0:4,0:6:9.03:0,9,111
chr10	37259356	.	G	GTGTGTGTGTGTA	3638.31	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=-2.802;DP=586;FS=8.982;HRun=0;HaplotypeScore=220.7256;InbreedingCoeff=0.7507;MQ=60.94;MQ0=12;MQRankSum=-3.072;QD=14.27;ReadPosRankSum=-4.259;VQSLOD=0.7381;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:47.66:0,48,662	1/1:14,0:13:20.94:225,21,0	0/0:25,0:14:40.30:0,40,403	0/0:39,0:19:6.22:0,6,241	0/0:21,0:21:53.96:0,54,1108	0/0:20,0:20:47.40:0,47,725	0/0:17,0:17:26.84:0,27,218	1/1:23,0:23:62.13:547,62,0	0/0:20,0:21:58.20:0,58,1109	0/0:24,0:24:59.13:0,59,600	0/0:23,0:22:30.33:0,30,371	0/1:24,0:23:99:301,0,178	1/1:9,0:9:24.03:371,24,0	1/1:7,0:19:6.02:162,6,0	0/0:11,0:11:23.94:0,24,371	0/0:27,0:27:72.04:0,72,1375	0/0:33,0:32:88.04:0,88,1464	0/0:13,0:13:26.68:0,27,199	1/1:11,0:10:29.96:367,30,0	1/1:26,0:25:36.28:383,36,0	1/1:18,0:18:41.84:479,42,0	1/1:22,0:20:27.39:225,27,0	0/1:12,0:12:0.31:0,0,147	0/1:30,0:28:30.88:31,0,193	1/1:6,9:26:3.01:113,3,0	0/0:20,0:19:56.89:0,57,729	1/1:4,15:20:12.47:435,12,0	0/0:6,0:6:17.99:0,18,218
chr10	37259358	.	A	ATA	1554.02	PASS	AC=18;AF=0.333;AN=54;BaseQRankSum=-2.413;DP=550;FS=5.057;HRun=0;HaplotypeScore=121.3091;InbreedingCoeff=0.9035;MQ=65.36;MQ0=9;MQRankSum=2.613;QD=11.10;ReadPosRankSum=-3.315;VQSLOD=2.5491;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:47.58:0,48,365	1/1:13,0:12:17.96:146,18,0	0/0:27,0:16:39.94:0,40,402	0/0:41,0:21:6.28:0,6,242	0/0:19,0:18:53.79:0,54,522	0/0:20,0:20:47.27:0,47,349	0/0:18,0:18:26.73:0,27,204	1/1:22,0:22:56.14:468,56,0	0/0:20,0:20:56.96:0,57,607	0/0:23,0:23:58.49:0,58,454	0/0:23,0:23:29.78:0,30,231	0/0:19,0:18:2.20:0,2,187	1/1:8,0:8:16.25:126,16,0	1/1:11,0:12:3.01:36,3,0	0/0:11,0:11:23.90:0,24,187	0/0:28,0:28:72.04:0,72,768	0/0:34,0:33:89.73:0,90,840	0/0:13,0:13:26.66:0,27,184	1/1:12,0:11:20.94:174,21,0	1/1:14,6:21:26.81:227,27,0	1/1:17,0:17:35.68:303,36,0	1/1:17,0:16:26.97:224,27,0	0/0:12,0:12:13.48:0,13,160	0/0:27,0:26:30.17:0,30,228	./.	0/0:22,0:22:56.82:0,57,458	1/1:17,0:17:7.98:52,8,0	0/0:6,0:6:17.01:0,17,128
chr10	37260025	.	ATGTGCGTG	A	8680.93	PASS	AB=0.950;AC=21;AF=0.375;AN=56;BaseQRankSum=8.459;DP=779;FS=8.913;HRun=0;HaplotypeScore=211.9315;InbreedingCoeff=0.9152;MQ=63.09;MQ0=4;MQRankSum=-12.242;QD=29.83;ReadPosRankSum=1.740;VQSLOD=3.1979;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:16,22:38:42.14:1050,42,0	0/0:11,0:11:21.07:0,21,874	0/0:37,0:29:24.20:0,24,774	0/0:44,0:32:36.15:0,36,1157	0/0:8,0:25:23.59:0,24,280	1/1:6,14:20:21.07:540,21,0	1/1:12,16:27:13.80:751,14,0	0/0:27,0:27:42.06:0,42,1474	0/0:10,0:25:24.08:0,24,699	1/1:4,25:29:63.17:1473,63,0	1/1:4,14:18:36.12:922,36,0	1/1:6,20:26:42.14:1087,42,0	0/0:33,0:33:78.22:0,78,3015	0/0:35,0:35:81.23:0,81,3204	1/1:4,22:26:42.14:1084,42,0	0/0:10,0:25:30.08:0,30,795	0/0:16,0:38:32.95:0,33,813	1/1:12,12:24:21.96:545,22,0	0/0:23,0:22:32.93:0,33,874	0/0:20,0:20:45.05:0,45,1713	0/0:69,0:68:99:0,150,5350	0/0:19,0:19:36.12:0,36,1479	1/1:5,15:20:33.10:840,33,0	1/1:8,16:24:14.97:323,15,0	0/0:27,0:27:66.20:0,66,2301	0/1:36,2:38:64.93:65,0,2507	0/0:11,0:11:30.08:0,30,1142	0/0:18,0:18:27.09:0,27,933
chr10	37260050	.	T	TGTGC	3791.51	PASS	AB=0.906;AC=7;AF=0.125;AN=56;BaseQRankSum=-2.486;DP=764;FS=2.115;HRun=0;HaplotypeScore=178.0660;InbreedingCoeff=0.1836;MQ=60.02;MQ0=5;MQRankSum=-4.168;QD=27.68;ReadPosRankSum=3.402;VQSLOD=3.8718;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:76.43:0,76,1130	0/0:12,0:12:36.12:0,36,656	0/0:34,0:20:50.22:0,50,801	0/0:42,0:31:81.12:0,81,1237	0/1:24,0:24:96.07:96,0,424	0/0:23,0:23:42.01:0,42,581	0/0:25,0:25:45.06:0,45,565	0/0:36,0:36:99:0,101,1749	0/1:16,0:16:86.57:303,0,87	0/0:33,0:33:81.24:0,81,1025	0/0:21,0:21:46.79:0,47,538	0/0:29,0:29:60.16:0,60,763	0/0:30,0:30:87.01:0,87,1532	0/0:28,0:28:84.22:0,84,1460	0/0:28,0:28:57.65:0,58,760	0/1:17,0:17:99:336,0,104	0/1:28,0:28:99:350,0,284	0/0:20,0:20:39.09:0,39,543	0/0:20,0:18:51.14:0,51,897	0/0:19,0:19:51.14:0,51,894	0/0:60,0:59:99:0,148,2707	0/0:23,0:23:63.16:0,63,1055	0/0:25,0:25:54.04:0,54,675	0/0:22,0:22:17.81:0,18,239	0/0:31,0:31:84.21:0,84,1389	0/1:4,30:38:22.32:1981,0,22	0/0:22,0:22:66.20:0,66,1152	1/1:0,14:14:27.09:726,27,0
chr10	37260288	.	TTCTCTCTCTCTTTCTC	T	5098.59	PASS	AB=1.000;AC=37;AF=0.661;AN=56;BaseQRankSum=-1.190;DP=503;FS=23.237;HRun=0;HaplotypeScore=211.6918;InbreedingCoeff=0.5696;MQ=79.97;MQ0=10;MQRankSum=1.130;QD=14.05;ReadPosRankSum=3.109;VQSLOD=2.3843;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:20:15.60:248,16,0	1/1:9,1:10:26.98:340,27,0	0/0:27,0:21:37.99:0,38,367	0/1:42,0:19:23.70:24,0,72	0/0:21,0:21:38.97:0,39,770	0/1:17,0:17:80.22:207,0,80	1/1:10,0:10:0.28:130,0,0	1/1:32,0:32:61:531,61,0	0/0:19,0:19:44.66:0,45,972	0/1:21,0:21:19.11:224,0,19	0/1:14,0:14:1.64:176,0,2	1/1:8,0:8:11.99:100,12,0	1/1:12,0:12:29.14:258,29,0	1/1:16,0:15:37.70:314,38,0	1/1:16,1:17:2.97:312,3,0	0/0:11,0:11:10.05:0,10,455	0/0:21,0:21:36.97:0,37,1084	0/1:15,0:15:6.74:142,0,7	1/1:15,1:15:29.06:357,29,0	1/1:18,1:19:37.26:337,37,0	1/1:24,0:24:37.83:287,38,0	1/1:10,0:10:17.24:121,17,0	1/1:12,0:12:26.95:221,27,0	1/1:19,0:19:20.17:213,20,0	1/1:14,0:14:31.23:275,31,0	0/0:30,0:30:69.17:0,69,2926	1/1:15,0:15:39.82:282,40,0	0/0:11,0:11:24.03:0,24,670
chr10	37260298	.	CTT	C	5532.63	PASS	AB=1.000;AC=39;AF=0.696;AN=56;BaseQRankSum=-0.453;DP=475;FS=20.663;HRun=3;HaplotypeScore=76.3717;InbreedingCoeff=0.4290;MQ=69.20;MQ0=13;MQRankSum=1.962;QD=14.56;ReadPosRankSum=2.823;VQSLOD=0.8261;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:18:6.43:255,6,0	1/1:9,0:9:26.93:216,27,0	0/0:22,0:16:38.01:0,38,369	0/1:34,0:11:23.75:24,0,72	0/0:19,0:19:40.69:0,41,318	1/1:20,0:20:31.69:404,32,0	0/1:11,0:11:13:148,0,13	1/1:5,22:27:47.66:512,48,0	0/0:19,0:19:20.38:0,20,304	1/1:16,2:18:14.35:358,14,0	0/1:15,0:15:6.08:257,0,6	1/1:4,0:4:11.99:100,12,0	1/1:12,0:12:29.67:257,30,0	1/1:17,0:16:38.86:311,39,0	0/1:20,0:20:50.12:254,0,50	0/1:17,0:16:42.63:43,0,188	0/0:25,0:24:33.28:0,33,254	0/1:18,0:18:7.29:257,0,7	1/1:13,0:12:22.05:268,22,0	1/1:17,0:17:41.51:327,42,0	1/1:19,0:19:37.45:312,37,0	1/1:10,0:10:26.90:217,27,0	1/1:10,0:10:26.95:221,27,0	1/1:15,0:15:20.33:165,20,0	1/1:15,0:15:32.96:274,33,0	0/1:26,0:26:7.01:7,0,526	1/1:15,0:15:42.41:346,42,0	0/0:10,0:9:15.68:0,16,118
chr10	37260300	.	TTCTC	T	303.75	PASS	AB=1.000;AC=13;AF=0.295;AN=44;BaseQRankSum=1.976;DP=497;FS=13.380;HRun=0;HaplotypeScore=115.1823;InbreedingCoeff=0.2409;MQ=66.10;MQ0=17;MQRankSum=1.267;QD=1.89;ReadPosRankSum=2.711;VQSLOD=1.5968;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:14.75:0,15,160	0/1:10,0:10:17.69:23,0,18	./.	./.	1/1:15,4:19:5.97:65,6,0	0/0:23,0:23:5.05:0,5,66	0/0:12,0:11:6.02:0,6,76	0/0:29,0:29:2.94:0,3,18	1/1:18,1:19:5.91:53,6,0	0/0:18,0:18:7.84:0,8,88	0/0:16,0:16:6.02:0,6,97	./.	0/0:12,0:12:1.19:0,1,3	./.	0/1:19,0:19:28.23:28,0,176	0/1:18,0:17:36.02:36,0,108	1/1:12,14:25:12.04:185,12,0	0/0:23,0:21:18.44:0,18,189	1/1:16,0:15:2.39:28,2,0	0/1:19,0:19:10.99:19,0,11	0/0:22,0:21:3:0,3,25	0/0:12,0:12:5.67:0,6,28	./.	0/1:15,0:15:0.11:0,0,0	0/0:14,0:14:2.94:0,3,18	0/0:26,0:26:46.30:0,46,742	./.	0/0:8,0:7:9.03:0,9,128
chr10	37260954	.	GT	G	10157.88	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=7.815;DP=632;FS=5.559;HRun=9;HaplotypeScore=86.0647;InbreedingCoeff=0.9894;MQ=82.18;MQ0=0;MQRankSum=-3.792;QD=21.03;ReadPosRankSum=3.445;VQSLOD=5.5895;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,37:44:99:988,108,0	1/1:1,15:16:42.02:384,42,0	0/0:27,1:24:11:0,11,329	0/0:33,0:27:18.20:0,18,350	0/0:24,0:24:72.19:0,72,812	1/1:3,22:26:53.06:473,53,0	1/1:6,15:21:42:384,42,0	1/1:3,21:24:63.03:576,63,0	0/0:17,0:17:45.13:0,45,519	1/1:5,18:23:54.02:494,54,0	1/1:2,19:21:25.41:487,25,0	1/1:2,10:12:24.01:220,24,0	1/1:5,14:19:33.01:302,33,0	1/1:2,24:26:63.03:577,63,0	1/1:4,17:21:42.02:384,42,0	0/0:23,0:23:69.19:0,69,786	0/0:24,0:24:69.01:0,69,756	1/1:1,21:22:42.02:385,42,0	1/1:2,23:25:69:620,69,0	1/1:5,16:21:41.96:376,42,0	1/1:1,10:11:30.02:275,30,0	1/1:3,15:18:39.01:357,39,0	1/1:5,22:27:55.54:542,56,0	1/1:0,19:19:48.03:439,48,0	1/1:4,14:18:36.01:329,36,0	1/1:2,23:25:69.04:631,69,0	1/1:7,28:35:75.03:686,75,0	1/1:0,9:9:27.01:247,27,0
chr10	37262041	.	GCT	G	90.41	PASS	AB=0.820;AC=2;AF=0.036;AN=56;BaseQRankSum=5.059;DP=701;FS=1.322;HRun=0;HaplotypeScore=83.0008;InbreedingCoeff=-0.0292;MQ=72.36;MQ0=0;MQRankSum=-4.986;QD=1.71;ReadPosRankSum=-2.338;VQSLOD=1.3722;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,114,2262	0/0:10,0:10:30.10:0,30,594	0/1:16,11:23:99:165,0,774	0/1:24,2:24:1.42:1,0,1101	0/0:23,0:22:66.23:0,66,1337	0/0:32,0:32:96.33:0,96,1950	0/0:35,0:35:99:0,105,2134	0/0:25,0:25:75.26:0,75,1504	0/0:16,0:16:48.16:0,48,975	0/0:33,0:33:99:0,99,2009	0/0:13,0:13:39.13:0,39,793	0/0:18,0:18:54.19:0,54,1097	0/0:20,0:20:57.20:0,57,1158	0/0:25,0:25:75.26:0,75,1524	0/0:33,0:33:99:0,99,1931	0/0:34,0:34:99:0,99,1990	0/0:28,0:28:84.29:0,84,1707	0/0:14,0:14:42.10:0,42,812	0/0:24,0:24:66.04:0,66,1318	0/0:24,0:24:72.20:0,72,1421	0/0:26,0:26:78.27:0,78,1585	0/0:23,0:23:69.24:0,69,1399	0/0:19,0:19:57.20:0,57,1132	0/0:37,0:37:99:0,111,2182	0/0:24,0:24:72.25:0,72,1452	0/0:27,0:27:81.28:0,81,1638	0/0:38,0:38:99:0,114,2276	0/0:8,0:8:24.08:0,24,488
chr10	37262774	.	ACG	A	767.49	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=4.845;DP=558;FS=3.027;HRun=0;HaplotypeScore=82.4413;InbreedingCoeff=0.6510;MQ=78.55;MQ0=9;MQRankSum=-0.806;QD=3.76;ReadPosRankSum=0.048;VQSLOD=1.8965;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:4,40:44:15.03:164,15,0	0/1:8,0:8:8.89:9,0,83	0/0:19,0:14:2.65:0,3,12	0/1:30,0:19:6.14:6,0,86	0/0:19,0:19:33.11:0,33,297	1/1:5,16:21:9.02:101,9,0	1/1:5,16:21:15.04:176,15,0	0/0:26,0:26:40.77:0,41,298	0/0:13,0:13:32.95:0,33,410	1/1:8,9:17:23.94:205,24,0	1/1:5,9:13:3:25,3,0	0/1:11,0:11:7.86:8,0,101	0/0:13,0:13:14.94:0,15,126	0/0:20,0:19:23.93:0,24,222	1/1:7,10:17:12.04:149,12,0	0/0:11,0:11:7.83:0,8,228	0/0:41,0:39:28.81:0,29,875	1/1:10,11:21:11.79:109,12,0	0/0:24,0:23:26.95:0,27,398	0/0:16,0:16:23.68:0,24,253	0/0:20,0:20:32.85:0,33,303	0/0:22,0:22:11.98:0,12,137	0/0:17,0:17:15.01:0,15,149	0/0:25,0:25:23.49:0,23,215	0/0:17,0:17:26.97:0,27,269	0/0:26,0:26:3.89:0,4,349	0/0:10,0:9:14.91:0,15,151	0/0:15,0:15:32.53:0,33,289
chr10	37262786	.	GCGCA	G	452.59	PASS	AB=0.976;AC=10;AF=0.179;AN=56;BaseQRankSum=0.322;DP=544;FS=0.000;HRun=0;HaplotypeScore=99.8636;InbreedingCoeff=-0.0278;MQ=67.64;MQ0=13;MQRankSum=-0.342;QD=2.49;ReadPosRankSum=-1.579;VQSLOD=1.7413;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:47,2:49:17.56:162,0,18	0/1:9,0:8:5.90:6,0,135	0/0:11,0:7:2.71:0,3,13	0/1:23,0:12:6.61:7,0,85	0/0:18,0:18:8.17:0,8,441	0/1:18,1:19:45.56:46,0,50	0/1:22,1:23:32.21:82,0,32	0/0:21,0:21:52.56:0,53,374	0/0:15,0:14:38.95:0,39,703	1/1:15,0:15:3.87:196,4,0	0/1:15,1:15:56.93:67,0,57	0/1:11,0:11:6.11:6,0,157	0/0:13,0:13:14.90:0,15,178	0/0:20,0:19:26.93:0,27,325	0/0:15,1:16:11.25:0,11,95	0/0:12,0:12:26.94:0,27,458	0/0:42,0:40:95.04:0,95,1560	0/1:17,0:17:16.51:17,0,55	0/0:23,0:22:34.06:0,34,655	0/0:15,0:15:26.98:0,27,455	0/0:27,0:27:35.90:0,36,447	0/0:17,0:17:14.59:0,15,248	0/0:16,0:15:17.95:0,18,218	0/0:26,0:26:23.83:0,24,287	0/0:19,0:19:35.95:0,36,449	0/0:26,0:26:13.44:0,13,705	0/0:11,0:9:15.40:0,15,232	0/0:14,0:14:36.64:0,37,554
chr10	37262788	.	G	GCA	574.01	PASS	AB=0.819;AC=20;AF=0.385;AN=52;BaseQRankSum=-0.019;DP=555;FS=15.307;HRun=0;HaplotypeScore=93.9451;InbreedingCoeff=0.1152;MQ=64.54;MQ0=13;MQRankSum=-0.911;QD=2.16;ReadPosRankSum=-0.254;VQSLOD=0.6964;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:26.50:0,26,176	1/1:8,0:7:6:61,6,0	./.	./.	0/1:17,1:18:23.76:24,0,149	0/0:19,0:19:14.77:0,15,101	0/0:23,0:23:26.68:0,27,186	1/1:23,0:23:5.94:41,6,0	0/1:15,0:14:0.93:1,0,187	0/0:17,0:17:14.32:0,14,97	0/0:16,0:15:11.76:0,12,75	1/1:11,0:11:6.01:65,6,0	0/1:6,7:13:4.98:39,0,5	0/1:8,10:17:7.73:122,0,8	0/0:17,0:17:1.89:0,2,149	0/0:9,0:12:17.85:0,18,161	0/0:40,0:41:6.60:0,7,517	0/0:17,0:18:17.74:0,18,122	0/1:25,0:23:29.25:91,0,29	0/1:9,7:16:41.09:109,0,41	0/1:18,9:28:25.96:26,0,43	0/0:7,8:15:8:0,8,62	1/1:12,0:18:8.04:58,8,0	1/1:22,1:30:3:26,3,0	0/1:13,5:18:27.80:28,0,79	0/0:22,0:26:24.92:0,25,239	0/1:7,4:9:26.18:39,0,26	0/1:13,0:13:2.69:3,0,125
chr10	37264005	.	AG	A	1999.03	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.344;DP=722;FS=1.783;HRun=1;HaplotypeScore=65.6096;InbreedingCoeff=0.9998;MQ=61.45;MQ0=2;MQRankSum=-0.077;QD=38.44;ReadPosRankSum=1.016;VQSLOD=4.2715;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:69.24:0,69,1098	0/0:12,0:12:36.12:0,36,576	0/0:22,0:19:57.15:0,57,861	0/0:15,0:15:45.15:0,45,700	0/0:48,0:48:99:0,144,2299	0/0:22,0:22:63.21:0,63,1007	0/0:20,0:20:60.20:0,60,959	0/0:34,0:32:96.32:0,96,1515	0/0:32,0:32:96.31:0,96,1509	0/0:34,0:34:99:0,102,1630	0/0:27,0:27:81.28:0,81,1294	0/0:24,0:24:72.23:0,72,1128	0/0:33,0:33:99:0,99,1578	0/0:12,0:12:36.12:0,36,576	0/0:26,0:26:78.25:0,78,1223	0/0:32,0:32:96.31:0,96,1512	0/0:27,0:27:81.28:0,81,1291	0/0:21,0:21:63.21:0,63,1001	0/0:23,0:23:69.24:0,69,1104	0/0:31,0:31:93.32:0,93,1486	0/0:27,0:27:81.28:0,81,1295	0/0:25,0:25:75.26:0,75,1194	0/0:25,0:25:75.26:0,75,1196	0/0:17,0:17:48.16:0,48,767	0/0:19,0:19:57.18:0,57,888	1/1:0,38:38:99:1575,114,0	0/0:39,0:39:99:0,117,1870	1/1:0,14:14:39.13:545,39,0
chr10	37264397	.	T	TA	3614.05	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=-12.505;DP=626;FS=1.659;HRun=12;HaplotypeScore=82.1278;InbreedingCoeff=0.9182;MQ=61.98;MQ0=4;MQRankSum=0.858;QD=18.07;ReadPosRankSum=0.212;VQSLOD=4.4991;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,32:37:75.59:730,76,0	0/0:14,0:14:41.76:0,42,306	0/1:10,0:8:2.62:3,0,19	0/0:12,0:8:5.89:0,6,41	0/0:36,0:38:93.48:0,93,666	1/1:1,22:25:71.79:671,72,0	1/1:1,13:14:33.05:321,33,0	0/0:24,0:21:49.16:0,49,340	0/0:21,0:21:48.12:0,48,345	1/1:10,25:34:28.25:584,28,0	1/1:7,21:30:59.90:569,60,0	0/0:18,1:21:16.62:0,17,266	0/0:20,0:21:55.72:0,56,399	0/0:14,0:14:26.02:0,26,182	1/1:11,22:33:32.18:474,32,0	0/0:21,0:21:46.74:0,47,334	0/0:24,0:24:56.51:0,57,409	1/1:3,12:15:27.04:262,27,0	0/0:26,0:25:47.68:0,48,348	0/0:29,0:30:76.58:0,77,551	0/0:21,0:21:54.52:0,55,371	0/0:13,0:13:29.79:0,30,216	0/0:22,0:24:27.56:0,28,316	0/0:16,0:17:40.78:0,41,288	0/0:18,0:18:44.71:0,45,328	0/0:26,0:28:57.71:0,58,404	0/0:30,0:30:52.99:0,53,466	0/0:9,0:8:17.83:0,18,130
chr10	37266704	.	AT	A	336.83	PASS	AC=10;AF=0.185;AN=54;BaseQRankSum=-1.085;DP=385;FS=9.507;HRun=2;HaplotypeScore=65.6306;InbreedingCoeff=0.8127;MQ=76.69;MQ0=4;MQRankSum=-0.466;QD=5.61;ReadPosRankSum=-1.735;VQSLOD=-0.6894;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:14,3:17:8.94:69,9,0	0/0:7,0:7:10.98:0,11,69	0/0:24,0:18:0.75:0,1,229	0/0:19,0:14:13.69:0,14,118	0/0:8,0:8:20.97:0,21,180	0/0:1,12:13:0.43:0,0,1	1/1:11,0:11:10.21:80,10,0	0/0:27,0:26:56.39:0,56,357	0/0:5,0:5:9.01:0,9,82	1/1:16,0:16:21.01:191,21,0	1/1:6,0:6:5.98:48,6,0	0/0:8,0:8:20.92:0,21,176	0/0:19,0:19:26.61:0,27,139	0/0:14,0:14:25.67:0,26,136	./.	0/0:16,0:16:38.94:0,39,334	0/0:22,0:22:53.89:0,54,466	1/1:0,10:10:9.02:102,9,0	0/0:15,0:13:12.82:0,13,146	0/0:17,0:17:23.59:0,24,122	0/0:12,0:12:22.28:0,22,110	0/0:15,0:15:25.75:0,26,89	0/0:10,0:10:23.94:0,24,199	0/0:12,0:12:26.77:0,27,199	0/0:20,0:20:15.90:0,16,110	0/0:11,0:11:26.34:0,26,218	0/0:16,0:16:20.15:0,20,91	0/0:8,0:8:20.88:0,21,163
chr10	37266718	.	GGT	G	117.33	PASS	AB=0.848;AC=4;AF=0.071;AN=56;BaseQRankSum=0.636;DP=350;FS=29.401;HRun=0;HaplotypeScore=69.1203;InbreedingCoeff=-0.0746;MQ=72.21;MQ0=4;MQRankSum=-0.477;QD=2.35;ReadPosRankSum=3.091;VQSLOD=0.0593;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:17.97:0,18,179	0/0:7,0:7:20.14:0,20,117	0/0:22,0:15:17.91:0,18,236	0/1:15,1:12:28.17:28,0,113	0/0:5,0:5:6.01:0,6,72	0/0:11,0:11:8.56:0,9,200	0/0:17,0:17:36.60:0,37,412	0/0:23,0:22:63.64:0,64,404	0/0:7,0:7:20.88:0,21,258	0/0:8,0:8:16.58:0,17,174	0/0:1,0:1:3:0,3,25	0/0:4,0:4:8.57:0,9,56	0/0:16,0:16:41.84:0,42,201	0/0:15,1:16:11.98:0,12,210	0/0:6,0:6:18.03:0,18,261	0/0:16,0:16:38.63:0,39,445	0/0:17,0:17:23.97:0,24,304	0/0:13,1:14:15.88:0,16,306	0/0:11,0:10:25.40:0,25,130	0/0:14,0:14:39.64:0,40,196	0/0:15,0:15:43.60:0,44,272	0/0:16,0:16:42.90:0,43,228	0/0:6,0:6:8.92:0,9,66	0/1:10,5:15:82.06:104,0,82	0/0:20,0:20:52.64:0,53,304	0/1:11,1:12:2.55:3,0,149	0/0:16,0:16:43:0,43,234	0/1:5,2:7:14.13:84,0,14
chr10	37267536	.	CCACCACCACACACA	C	2936.71	PASS	AB=1.000;AC=33;AF=0.660;AN=50;BaseQRankSum=-1.345;DP=318;FS=1.080;HRun=0;HaplotypeScore=86.6350;InbreedingCoeff=0.3164;MQ=44.69;MQ0=46;MQRankSum=0.565;QD=11.94;ReadPosRankSum=2.495;VQSLOD=1.7052;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:21:14.54:425,15,0	1/1:3,0:3:3.01:57,3,0	0/1:13,0:5:8.68:9,0,30	0/0:12,0:5:14.19:0,14,133	0/0:4,0:3:6.02:0,6,138	1/1:18,0:17:10.64:382,11,0	0/1:16,0:14:8.65:491,0,9	1/1:16,0:14:9.50:144,9,0	0/0:9,0:7:18.06:0,18,385	0/1:8,0:8:82.43:208,0,82	1/1:5,0:4:2.02:19,2,0	1/1:9,0:8:16.99:273,17,0	1/1:8,0:6:6.02:101,6,0	1/1:5,7:11:3.01:126,3,0	1/1:5,0:8:3.92:39,4,0	0/0:8,0:7:16.25:0,16,310	0/0:25,0:22:51.61:0,52,1428	0/1:6,0:3:10.26:10,0,83	1/1:13,0:10:18:255,18,0	./.	1/1:31,0:27:3.01:35,3,0	1/1:14,0:8:11.17:228,11,0	./.	1/1:14,0:13:9.33:157,9,0	0/0:7,0:6:0.89:0,1,2	0/1:14,0:10:33.71:85,0,34	1/1:12,0:12:1.37:52,1,0	./.
chr10	37267538	.	ACCAC	A	2776.60	PASS	AB=0.902;AC=29;AF=0.604;AN=48;BaseQRankSum=-3.405;DP=313;FS=7.202;HRun=0;HaplotypeScore=52.0333;InbreedingCoeff=0.2914;MQ=44.23;MQ0=46;MQRankSum=2.886;QD=11.82;ReadPosRankSum=4.195;VQSLOD=1.4283;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:20:24.87:512,25,0	1/1:3,0:3:3.01:57,3,0	0/1:11,0:4:8.68:9,0,30	0/0:11,0:5:14.19:0,14,133	0/0:4,0:3:6.02:0,6,138	0/1:15,1:15:0.71:359,0,1	1/1:14,2:14:1.89:478,2,0	1/1:14,3:15:9.83:145,10,0	0/0:9,0:7:18.06:0,18,358	1/1:2,6:8:15.02:247,15,0	1/1:5,0:3:1.71:55,2,0	0/1:10,1:10:5.81:241,0,6	1/1:5,3:6:6.02:101,6,0	1/1:10,1:9:3.01:38,3,0	0/1:8,0:7:14.83:31,0,15	0/0:8,0:7:15.84:0,16,212	0/0:25,0:22:54.95:0,55,925	0/0:7,0:4:8.85:0,9,78	1/1:13,0:10:18:255,18,0	./.	1/1:11,21:27:3.01:35,3,0	1/1:12,1:7:9.11:225,9,0	./.	0/1:12,2:13:10.60:80,0,11	./.	0/1:16,0:12:15.16:15,0,33	0/1:3,8:11:0.44:50,0,0	./.
chr10	37267539	.	CCACCACACACACACACA	C	674.28	PASS	AB=1.000;AC=21;AF=0.438;AN=48;BaseQRankSum=2.837;DP=311;FS=0.000;HRun=0;HaplotypeScore=102.9367;InbreedingCoeff=0.0413;MQ=43.94;MQ0=46;MQRankSum=2.909;QD=3.64;ReadPosRankSum=0.779;VQSLOD=1.6045;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:21:99:112,0,148	1/1:3,0:3:2.98:21,3,0	0/0:11,0:4:3.89:0,4,33	0/0:11,0:5:9.02:0,9,101	0/0:4,0:3:6.02:0,6,80	0/1:16,0:15:63.73:66,0,64	0/1:16,0:14:99:126,0,122	0/1:16,0:14:17.50:18,0,137	0/0:9,0:7:15.05:0,15,271	0/1:8,0:8:61.62:62,0,210	0/0:5,0:3:6.49:0,6,76	0/1:11,0:10:46.30:46,0,85	0/1:7,0:5:1.99:2,0,11	1/1:10,0:9:3.01:52,3,0	0/0:8,0:7:6.48:0,6,63	0/1:8,0:7:21.62:22,0,339	0/0:25,0:22:54.65:0,55,2179	0/0:8,0:4:9.03:0,9,269	0/1:13,0:10:6.68:7,0,82	./.	0/0:30,0:26:0.89:0,1,2	1/1:13,0:7:11.20:71,11,0	./.	1/1:14,0:13:7.39:33,7,0	./.	1/1:8,8:12:4.96:168,5,0	1/1:11,0:11:2.43:18,2,0	./.
chr10	37267545	.	CACA	C	265.29	PASS	AB=0.843;AC=14;AF=0.280;AN=50;BaseQRankSum=1.161;DP=346;FS=0.000;HRun=0;HaplotypeScore=60.1083;InbreedingCoeff=0.1538;MQ=40.71;MQ0=57;MQRankSum=-2.407;QD=2.01;ReadPosRankSum=-0.465;VQSLOD=1.3975;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:26:28.92:0,29,304	0/0:2,0:2:3:0,3,29	./.	0/0:8,0:2:6.02:0,6,72	0/0:5,0:4:9.03:0,9,109	0/1:21,0:21:1.83:2,0,238	0/1:19,1:17:22.94:23,0,199	0/0:18,0:16:5.69:0,6,28	0/0:11,0:9:21.02:0,21,282	0/0:13,0:11:19.31:0,19,156	0/0:7,0:5:9.02:0,9,103	0/1:7,5:11:96.44:132,0,96	0/0:7,0:5:6.01:0,6,60	1/1:13,0:9:2.97:21,3,0	1/1:6,1:7:6.03:69,6,0	0/0:9,0:8:16.46:0,16,184	0/0:29,0:25:63.10:0,63,1096	0/1:5,0:5:2.55:50,0,3	0/1:12,1:10:38.29:38,0,80	./.	0/0:34,0:27:2.97:0,3,20	0/0:14,0:7:11.70:0,12,113	1/1:4,0:2:2.74:12,3,0	0/1:11,4:14:26.04:26,0,39	0/0:5,0:5:3.01:0,3,32	1/1:15,0:11:1.10:28,1,0	0/0:13,0:12:2.37:0,2,21	./.
chr10	37268002	.	G	GA	1121.90	PASS	AC=12;AF=0.231;AN=52;BaseQRankSum=-1.543;DP=161;FS=9.132;HRun=1;HaplotypeScore=40.5372;InbreedingCoeff=0.6943;MQ=61.54;MQ0=0;MQRankSum=-4.032;QD=15.37;ReadPosRankSum=3.250;VQSLOD=2.7906;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,9:15:25.83:209,26,0	0/0:3,0:3:2.97:0,3,20	0/0:2,0:2:5.60:0,6,44	0/0:7,0:7:5.30:0,5,45	0/0:5,0:5:6.01:0,6,63	1/1:0,7:7:20.72:208,21,0	1/1:1,17:18:29.95:181,30,0	0/0:7,0:7:15.01:0,15,163	0/0:5,0:5:10.73:0,11,85	1/1:5,8:13:38.98:438,39,0	1/1:0,4:4:6.36:57,6,0	0/0:5,0:5:11.27:0,11,94	0/0:2,0:2:4.26:0,4,42	0/0:2,0:2:6.01:0,6,61	1/1:1,15:16:29.80:196,30,0	0/0:6,0:6:17.77:0,18,168	0/0:3,0:3:8.94:0,9,66	./.	0/0:5,0:5:0:0,0,1	0/0:4,0:4:12:0,12,123	0/0:7,0:7:8.24:0,8,84	0/0:3,0:3:6.01:0,6,65	0/0:5,0:5:11.95:0,12,104	./.	0/0:6,0:6:14.90:0,15,111	0/0:3,0:3:9.03:0,9,115	0/0:4,0:4:10.81:0,11,62	0/0:1,0:1:3.01:0,3,38
chr10	37273388	.	AAGTAGTAGT	A	4030.85	PASS	AB=0.915;AC=41;AF=0.820;AN=50;BaseQRankSum=1.321;DP=438;FS=1.136;HRun=0;HaplotypeScore=135.7010;InbreedingCoeff=0.0608;MQ=50.48;MQ0=9;MQRankSum=-1.710;QD=11.32;ReadPosRankSum=-2.741;VQSLOD=1.9811;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:23:12.95:123,13,0	1/1:3,4:7:3.01:81,3,0	./.	./.	0/1:21,0:33:19.28:19,0,106	0/0:9,0:9:6:0,6,58	1/1:12,0:11:5.93:89,6,0	0/0:47,0:28:0:0,0,0	1/1:10,0:17:4.21:10,4,0	0/1:18,0:17:20.10:125,0,20	0/1:17,2:19:38.57:90,0,39	./.	1/1:8,3:10:6.02:154,6,0	1/1:3,5:8:6.02:162,6,0	0/1:16,0:16:16.85:162,0,17	1/1:4,0:13:3.28:9,3,0	0/1:17,0:18:7.21:10,0,7	1/1:19,0:18:13.76:115,14,0	1/1:7,7:12:18.05:423,18,0	1/1:4,14:17:38.98:800,39,0	1/1:9,0:9:8.82:175,9,0	1/1:4,7:11:18.06:406,18,0	1/1:15,0:15:14.88:215,15,0	1/1:6,0:6:3.01:36,3,0	1/1:8,10:18:12.04:303,12,0	1/1:15,5:18:25.93:335,26,0	1/1:10,6:15:3.01:81,3,0	1/1:14,0:14:11.78:108,12,0
chr10	37273563	.	TTC	T	1530.49	PASS	AB=0.868;AC=18;AF=0.333;AN=54;BaseQRankSum=-5.443;DP=451;FS=5.278;HRun=0;HaplotypeScore=74.7246;InbreedingCoeff=0.4553;MQ=64.20;MQ0=20;MQRankSum=2.789;QD=8.55;ReadPosRankSum=1.264;VQSLOD=2.8434;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:8,12:20:2.12:134,0,2	0/0:7,0:7:5.97:0,6,51	./.	0/0:37,0:18:8.84:0,9,77	0/1:20,1:22:23.22:23,0,29	1/1:16,0:16:23.86:227,24,0	1/1:13,3:16:17.69:251,18,0	0/0:41,0:39:26.23:0,26,250	0/0:5,0:13:14.92:0,15,168	1/1:13,0:13:6.59:191,7,0	1/1:16,0:15:26.93:264,27,0	0/1:5,0:5:21.28:21,0,39	0/0:8,0:8:5.88:0,6,48	0/0:9,0:9:5.75:0,6,63	1/1:14,4:18:35.43:373,35,0	0/0:13,0:17:24.40:0,24,214	0/0:12,0:15:28.20:0,28,247	0/1:6,2:9:2.08:133,0,2	0/0:19,0:19:15.91:0,16,165	0/0:12,0:12:1.30:0,1,3	0/0:19,0:18:16.85:0,17,165	0/0:7,0:6:6.48:0,6,58	0/1:6,0:6:11.76:16,0,12	1/1:15,0:19:10.23:70,10,0	0/1:17,0:16:2.69:3,0,76	0/0:19,0:18:10.65:0,11,192	0/0:13,0:13:8.49:0,8,89	0/0:8,0:4:3.48:0,3,40
chr10	37273616	.	CCT	C	1469.22	PASS	AB=0.990;AC=32;AF=0.571;AN=56;BaseQRankSum=3.200;DP=432;FS=6.375;HRun=0;HaplotypeScore=57.2703;InbreedingCoeff=0.2780;MQ=46.97;MQ0=39;MQRankSum=1.207;QD=5.40;ReadPosRankSum=0.556;VQSLOD=1.7570;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:12:2.99:24,3,0	0/0:4,0:3:5.97:0,6,43	0/0:36,0:6:11.92:0,12,95	0/0:57,0:6:11.94:0,12,98	0/1:21,0:21:21.34:77,0,21	1/1:21,0:20:21.92:166,22,0	1/1:11,0:10:2.99:24,3,0	0/1:23,0:22:41.08:126,0,41	1/1:8,0:8:2.60:10,3,0	1/1:12,0:11:25.88:200,26,0	1/1:11,0:10:5.82:48,6,0	1/1:2,6:7:6.02:73,6,0	0/1:9,0:9:24.84:25,0,108	0/0:10,0:10:10.95:0,11,146	1/1:14,0:13:11.92:90,12,0	0/1:11,0:11:4.51:30,0,5	1/1:14,1:14:1.69:98,2,0	1/1:10,0:10:14.96:121,15,0	0/1:12,0:8:44.54:45,0,48	0/0:13,0:13:13.87:0,14,157	0/0:16,0:13:9.02:0,9,192	0/0:13,0:11:26.77:0,27,229	1/1:1,6:7:11.61:106,12,0	1/1:6,17:22:26.89:314,27,0	0/0:11,0:11:20.12:0,20,137	0/1:16,0:15:18.84:19,0,109	0/1:12,0:12:5.74:6,0,128	0/1:13,0:11:18.31:51,0,18
chr10	37273632	.	TCTCA	T	1757.48	PASS	AB=0.933;AC=21;AF=0.375;AN=56;BaseQRankSum=-6.686;DP=440;FS=0.547;HRun=0;HaplotypeScore=73.8191;InbreedingCoeff=0.3479;MQ=51.98;MQ0=29;MQRankSum=0.372;QD=9.01;ReadPosRankSum=-0.810;VQSLOD=2.2756;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,12:13:3.01:59,3,0	0/0:3,0:2:6.02:0,6,96	0/0:29,0:7:20.88:0,21,168	0/0:34,0:4:11.94:0,12,98	0/1:25,1:26:47.08:47,0,103	1/1:4,15:19:30.08:452,30,0	0/1:3,9:11:14.92:53,0,15	0/1:23,0:22:93.15:93,0,341	1/1:6,0:6:4.01:88,4,0	1/1:1,14:14:38.47:469,38,0	1/1:2,12:13:5.69:118,6,0	0/0:9,0:9:0.25:0,0,24	0/1:10,0:10:21.32:21,0,307	0/0:13,0:12:20.13:0,20,444	1/1:2,12:13:11.97:195,12,0	0/0:14,0:13:16.95:0,17,87	0/0:19,0:19:30.44:0,30,172	1/1:1,10:11:15.05:296,15,0	0/1:12,0:10:35.47:35,0,210	0/0:13,0:13:20.12:0,20,418	0/0:19,0:16:9.85:0,10,467	0/0:16,0:14:33.03:0,33,525	0/1:10,0:9:9.03:9,0,45	0/0:25,0:24:9.68:0,10,133	0/0:16,0:16:36.05:0,36,459	0/0:19,0:19:9.24:0,9,210	0/1:10,0:10:2.72:3,0,233	0/0:16,0:14:28.57:0,29,188
chr10	37273634	.	TCA	T	2094.84	PASS	AB=0.977;AC=28;AF=0.519;AN=54;BaseQRankSum=0.360;DP=437;FS=12.090;HRun=0;HaplotypeScore=64.8031;InbreedingCoeff=0.6363;MQ=52.83;MQ0=26;MQRankSum=0.942;QD=8.62;ReadPosRankSum=4.429;VQSLOD=2.1124;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:13:2.99:23,3,0	0/0:3,0:2:6.02:0,6,93	0/0:26,0:8:11.97:0,12,99	./.	1/1:8,18:26:26.99:283,27,0	1/1:18,0:19:26.46:178,26,0	0/1:12,0:11:14.94:17,0,15	0/0:24,0:23:41.94:0,42,400	1/1:7,0:7:17.99:158,18,0	1/1:15,0:14:26.85:204,27,0	1/1:13,0:12:5.98:46,6,0	0/1:9,0:9:2.83:24,0,3	0/0:11,0:11:24.05:0,24,312	0/0:14,0:13:32.98:0,33,413	1/1:14,0:13:8.96:68,9,0	1/1:2,11:13:15.04:175,15,0	1/1:4,15:19:26.87:293,27,0	1/1:12,0:12:14.94:115,15,0	0/0:14,0:12:24.01:0,24,268	0/0:12,0:12:30.07:0,30,413	0/0:18,0:16:30.10:0,30,458	0/0:17,0:15:33.03:0,33,454	0/1:9,1:9:9.87:67,0,10	0/1:25,0:24:40.94:80,0,41	0/0:15,0:15:36.05:0,36,434	1/1:7,13:20:32.99:344,33,0	0/0:11,0:11:21.04:0,21,274	1/1:6,10:14:2.09:223,2,0
chr10	37275053	.	GTCTC	G	154.31	PASS	AB=1.000;AC=13;AF=0.260;AN=50;BaseQRankSum=5.372;DP=542;FS=4.322;HRun=0;HaplotypeScore=134.0977;InbreedingCoeff=0.3052;MQ=42.73;MQ0=57;MQRankSum=-4.152;QD=0.92;ReadPosRankSum=1.226;VQSLOD=2.3047;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:29:7.49:0,7,323	1/1:13,0:10:4.40:25,4,0	./.	./.	0/0:11,7:15:9.45:0,9,73	0/0:12,0:11:18.03:0,18,244	0/0:31,0:25:14.87:0,15,160	0/1:32,0:26:11.55:12,0,20	0/1:16,0:14:19.76:39,0,20	0/0:18,0:17:26.42:0,26,308	0/0:9,0:8:11.16:0,11,71	0/0:22,0:18:30.43:0,30,343	0/1:11,0:10:19.46:39,0,19	1/1:20,0:19:0.47:1,0,0	0/0:33,0:31:33.91:0,34,336	0/0:24,0:23:9.68:0,10,60	0/0:32,0:29:25.85:0,26,249	0/0:15,0:12:23.89:0,24,224	0/0:15,0:11:1.73:0,2,38	0/0:14,0:13:0:0,0,0	0/0:28,0:22:0:0,0,0	./.	0/0:12,0:10:2.94:0,3,44	0/0:35,0:30:53.27:0,53,699	0/1:21,0:20:0:0,0,0	0/1:26,0:22:9.34:9,0,114	1/1:23,0:22:23.46:152,23,0	1/1:6,0:4:0.11:5,0,0
chr10	37275068	.	TCTCACACACACA	T	2352.59	PASS	AB=0.889;AC=23;AF=0.460;AN=50;BaseQRankSum=-1.954;DP=550;FS=11.147;HRun=0;HaplotypeScore=178.9885;InbreedingCoeff=0.2355;MQ=42.24;MQ0=57;MQRankSum=-2.359;QD=7.42;ReadPosRankSum=0.718;VQSLOD=2.1824;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:30:12.17:0,12,709	1/1:6,9:12:9.78:207,10,0	./.	./.	0/1:21,0:18:8.74:9,0,561	0/0:11,0:10:20.99:0,21,533	0/0:27,0:21:8.43:0,8,178	1/1:28,0:24:46.42:313,46,0	0/1:19,0:17:99:132,0,683	0/0:15,0:14:28.57:0,29,1258	0/1:10,0:9:2.16:2,0,583	0/0:22,0:18:14.83:0,15,1321	0/1:15,2:14:13.16:418,0,13	1/1:10,4:13:3.01:56,3,0	0/0:32,0:30:22.35:0,22,1337	0/1:28,0:28:99:166,0,629	0/1:27,0:27:83.31:83,0,1418	0/0:16,0:13:21.04:0,21,650	0/1:14,1:12:13.75:366,0,14	1/1:19,1:18:2.97:86,3,0	./.	1/1:6,14:19:0.47:1,0,0	0/0:13,0:11:8.85:0,9,316	0/0:41,0:36:36.18:0,36,2363	0/1:6,14:19:0:0,0,0	0/1:8,0:24:61.37:191,0,61	1/1:9,13:22:26.33:392,26,0	1/1:4,0:4:8.71:94,9,0
chr10	37275070	.	T	TCA	1163.52	PASS	AB=0.930;AC=23;AF=0.500;AN=46;BaseQRankSum=-5.120;DP=558;FS=0.000;HRun=0;HaplotypeScore=136.4955;InbreedingCoeff=0.2940;MQ=41.50;MQ0=58;MQRankSum=2.847;QD=3.26;ReadPosRankSum=0.155;VQSLOD=2.6780;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:34,1:32:11.85:89,12,0	0/0:15,0:12:4.29:0,4,18	./.	./.	1/1:22,0:19:1.83:38,2,0	0/1:12,1:12:5.11:49,0,5	1/1:26,0:20:2.69:19,3,0	./.	1/1:22,0:19:16.96:140,17,0	1/1:15,0:14:1.39:61,1,0	0/0:10,0:9:5.97:0,6,46	0/1:21,1:18:41.15:115,0,41	0/0:17,0:14:11.28:0,11,56	./.	0/1:30,2:30:14.03:99,0,14	1/1:29,0:28:11.31:116,11,0	1/1:29,1:27:24.96:282,25,0	0/1:12,5:14:32.48:51,0,32	0/0:11,0:12:11.40:0,11,57	0/0:19,0:18:2.88:0,3,15	0/1:20,0:16:0:0,0,0	./.	1/1:13,0:11:5.84:34,6,0	0/1:36,4:35:56.22:219,0,56	0/1:20,0:19:0:0,0,0	0/0:28,0:24:17.21:0,17,91	0/0:23,0:22:8.56:0,9,43	0/0:6,0:4:8.71:0,9,49
chr10	37278670	.	GA	G	1912.24	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.255;DP=591;FS=9.974;HRun=1;HaplotypeScore=56.4889;InbreedingCoeff=0.9994;MQ=79.27;MQ0=0;MQRankSum=-1.756;QD=36.77;ReadPosRankSum=0.799;VQSLOD=3.2733;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:60.20:0,60,959	0/0:10,0:10:30.10:0,30,480	0/0:16,0:16:48.16:0,48,745	0/0:17,0:17:45.45:0,45,673	0/0:31,0:31:93.32:0,93,1484	0/0:27,0:27:75.24:0,75,1176	0/0:10,0:10:30.08:0,30,455	0/0:32,0:32:93.30:0,93,1445	0/0:20,0:20:60.20:0,60,959	0/0:30,0:30:90.30:0,90,1420	0/0:21,0:21:63.20:0,63,984	1/1:0,20:20:57.19:797,57,0	0/0:19,0:19:57.18:0,57,887	0/0:19,0:19:57.17:0,57,858	0/0:29,0:29:87.28:0,87,1366	0/0:18,0:18:54.18:0,54,864	0/0:25,0:25:75.26:0,75,1199	0/0:22,0:22:63.21:0,63,1007	0/0:21,0:21:63.21:0,63,1008	0/0:31,0:31:93.32:0,93,1483	0/0:13,0:13:39.13:0,39,624	0/0:26,0:26:78.27:0,78,1245	1/1:0,18:18:51.17:713,51,0	1/1:0,14:14:39.13:545,39,0	0/0:10,0:10:30.10:0,30,478	0/0:24,0:24:72.23:0,72,1129	0/0:29,0:29:87.30:0,87,1391	0/0:19,0:19:57.19:0,57,908
chr10	37278839	.	ATAAT	A	3081.13	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=6.183;DP=752;FS=17.406;HRun=0;HaplotypeScore=132.0293;InbreedingCoeff=0.9891;MQ=84.60;MQ0=0;MQRankSum=-2.899;QD=39.50;ReadPosRankSum=5.402;VQSLOD=2.8029;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:81.28:0,81,2150	0/0:4,0:4:12.04:0,12,302	0/0:29,0:28:72.25:0,72,1817	0/0:23,0:23:63.22:0,63,1584	0/0:27,0:27:78.25:0,78,2026	0/0:27,0:27:69.24:0,69,1840	0/0:23,0:23:69.24:0,69,1797	0/0:43,0:43:99:0,123,3281	0/0:17,0:17:51.18:0,51,1341	0/0:40,0:40:99:0,120,3128	0/0:28,0:28:81.28:0,81,2153	1/1:1,26:27:66.23:1231,66,0	0/0:25,0:25:66.23:0,66,1744	0/0:27,0:27:81.28:0,81,2120	0/0:33,0:33:96.32:0,96,2461	0/0:29,0:29:87.30:0,87,2321	0/0:24,0:24:66.23:0,66,1760	0/0:16,0:16:48.16:0,48,1242	0/0:28,0:28:75.26:0,75,1971	0/0:26,0:26:75.25:0,75,1892	0/0:34,0:34:93.32:0,93,2440	0/0:26,0:26:75.25:0,75,1946	1/1:2,23:25:54.18:985,54,0	1/1:2,24:26:53.98:1007,54,0	0/0:24,0:24:72.25:0,72,1919	0/0:36,0:36:99:0,102,2694	0/0:38,0:38:99:0,99,2502	0/0:16,0:16:45.12:0,45,1089
chr10	37279281	.	A	AT	2256.14	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-7.165;DP=661;FS=3.235;HRun=1;HaplotypeScore=66.7184;InbreedingCoeff=0.9981;MQ=67.55;MQ0=1;MQRankSum=-1.634;QD=36.99;ReadPosRankSum=0.710;VQSLOD=4.0824;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,117,1517	0/0:16,0:16:48.14:0,48,608	0/0:34,0:28:75.04:0,75,892	0/0:32,0:29:75.19:0,75,923	0/0:33,0:33:96.26:0,96,1187	0/0:20,0:20:54.17:0,54,689	0/0:31,0:31:90.28:0,90,1156	0/0:33,0:33:96.27:0,96,1171	0/0:26,0:26:75.23:0,75,959	0/0:20,0:20:54.16:0,54,679	0/0:16,0:16:45.15:0,45,583	1/1:1,17:18:51.17:764,51,0	0/0:20,0:20:54.15:0,54,680	0/0:10,0:10:30.10:0,30,389	0/0:26,0:26:78.25:0,78,1012	0/0:28,0:28:78.21:0,78,980	0/0:34,0:34:99:0,99,1254	0/0:8,0:8:20.99:0,21,236	0/0:15,0:15:42.13:0,42,532	0/0:32,0:32:90.27:0,90,1135	0/0:34,0:34:99:0,99,1255	0/0:23,0:23:69.19:0,69,854	1/1:1,21:22:60.16:873,60,0	1/1:0,21:21:51.17:762,51,0	0/0:19,0:19:51.16:0,51,660	0/0:23,0:23:69.20:0,69,866	0/0:17,0:17:51.17:0,51,660	0/0:10,0:10:30.10:0,30,387
chr10	37279974	.	G	GAA	2221.65	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-6.679;DP=608;FS=6.044;HRun=8;HaplotypeScore=67.7214;InbreedingCoeff=0.9977;MQ=75.49;MQ0=0;MQRankSum=0.697;QD=34.18;ReadPosRankSum=0.249;VQSLOD=3.5469;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:22:64.06:0,64,704	0/0:10,0:10:30.08:0,30,334	0/0:12,0:11:21.04:0,21,229	0/0:12,0:12:27.07:0,27,298	0/0:26,0:26:66.16:0,66,735	0/0:19,0:20:36.02:0,36,459	0/0:20,0:20:57.15:0,57,635	0/0:28,0:28:63.15:0,63,701	0/0:17,0:17:45.11:0,45,501	0/0:24,0:24:63.17:0,63,702	0/0:19,0:19:51.12:0,51,568	1/1:6,14:24:53.64:758,54,0	0/0:11,0:11:30.08:0,30,334	0/0:18,0:18:48.10:0,48,525	0/0:31,0:31:87.21:0,87,960	0/0:18,0:18:54.15:0,54,602	0/0:37,0:37:99:0,105,1170	0/0:26,0:26:66.17:0,66,736	0/0:19,0:19:51.12:0,51,561	0/0:31,0:32:88.51:0,89,991	0/0:14,0:14:42.11:0,42,468	0/0:22,0:22:54.14:0,54,602	1/1:3,16:19:42.14:667,42,0	1/1:0,20:22:60.20:940,60,0	0/0:21,0:21:63.15:0,63,690	0/0:25,0:25:75.19:0,75,829	0/0:29,0:29:72.16:0,72,793	0/0:30,0:30:89.82:0,90,943
chr10	37282075	.	GTT	G	10347.63	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-15.825;DP=644;FS=22.170;HRun=11;HaplotypeScore=96.5648;InbreedingCoeff=0.9857;MQ=65.93;MQ0=17;MQRankSum=0.008;QD=23.95;ReadPosRankSum=2.248;VQSLOD=2.8326;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,27:32:69.14:734,69,0	1/1:1,5:6:12.02:128,12,0	0/0:13,0:13:9.58:0,10,267	0/0:14,0:11:21.05:0,21,261	0/0:5,0:30:61.76:0,62,265	1/1:2,18:21:47.84:491,48,0	1/1:5,15:17:36.08:383,36,0	1/1:5,11:13:26.18:285,26,0	0/0:2,0:19:42.81:0,43,171	1/1:6,20:25:56.83:587,57,0	1/1:1,25:26:69.17:734,69,0	0/0:19,0:19:46.84:0,47,395	1/1:3,20:22:47.29:565,47,0	1/1:0,16:16:45.11:479,45,0	1/1:2,24:24:66.16:702,66,0	0/0:6,0:30:60.15:0,60,242	0/0:4,1:31:41.22:0,41,245	1/1:2,17:18:42.09:447,42,0	1/1:10,19:28:51.05:531,51,0	1/1:1,35:34:50.93:944,51,0	1/1:4,19:23:32.10:405,32,0	1/1:3,23:26:66.14:702,66,0	0/0:22,0:22:50.34:0,50,447	0/0:32,0:32:70.73:0,71,629	1/1:2,15:17:39.09:415,39,0	1/1:3,33:34:93.20:978,93,0	1/1:1,21:22:57.14:607,57,0	1/1:1,7:8:23.09:230,23,0
chr10	37282109	.	GT	G	1698.71	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=-0.001;DP=705;FS=2.903;HRun=7;HaplotypeScore=117.0043;InbreedingCoeff=0.8174;MQ=64.65;MQ0=11;MQRankSum=1.421;QD=15.73;ReadPosRankSum=1.348;VQSLOD=3.1324;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:30:76.63:0,77,932	0/0:10,0:10:30.10:0,30,377	0/0:43,0:27:15.29:0,15,577	0/1:38,0:20:24:24,0,274	0/0:26,0:26:75.21:0,75,917	0/0:21,0:21:60.18:0,60,744	0/0:18,0:18:42.13:0,42,528	0/0:19,0:19:48.15:0,48,602	0/0:24,0:24:69.21:0,69,854	0/0:30,0:29:81.24:0,81,995	0/0:32,0:32:78.25:0,78,979	1/1:2,17:19:45.10:459,45,0	0/0:23,0:23:63.19:0,63,781	0/0:18,0:18:51.16:0,51,642	0/0:31,0:29:81.25:0,81,1005	0/0:36,0:36:99:0,105,1296	0/0:39,0:39:99:0,102,1234	0/0:18,0:18:45.10:0,45,520	0/0:23,0:22:60.17:0,60,734	0/0:36,0:36:99:0,99,1233	0/0:15,0:15:39.12:0,39,490	0/0:24,0:24:63.16:0,63,748	1/1:0,24:24:66.07:673,66,0	1/1:1,26:27:69.09:691,69,0	0/0:16,0:16:42.12:0,42,516	0/0:36,0:36:99:0,108,1333	0/0:23,0:23:66.21:0,66,826	0/0:5,0:5:9.03:0,9,114
chr10	37283563	.	CAAAAT	C	5696.41	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=11.371;DP=466;FS=0.897;HRun=0;HaplotypeScore=89.8835;InbreedingCoeff=0.9666;MQ=71.19;MQ0=2;MQRankSum=-4.237;QD=47.47;ReadPosRankSum=2.758;VQSLOD=4.9408;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,38:39:30.49:1809,30,0	0/0:4,0:4:9.03:0,9,218	0/0:18,0:18:42.14:0,42,1016	0/0:22,0:18:46.64:0,47,1033	0/0:15,0:15:45.15:0,45,1176	1/1:0,12:12:30.10:630,30,0	1/1:1,12:13:27.09:566,27,0	0/0:23,0:23:63.19:0,63,1799	0/0:20,0:20:54.18:0,54,1660	1/1:1,12:13:33.11:662,33,0	1/1:1,6:7:18.06:348,18,0	0/0:18,0:18:51.16:0,51,1493	0/0:13,0:13:39.13:0,39,1176	0/0:12,0:12:36.12:0,36,1091	1/1:1,23:24:60.21:1259,60,0	0/0:23,0:23:66.20:0,66,1908	0/0:27,0:27:75.21:0,75,2219	1/1:0,12:12:21.07:423,21,0	0/0:18,0:17:42.14:0,42,1286	0/0:13,0:13:36.12:0,36,990	0/0:17,0:17:45.15:0,45,1325	0/0:10,0:10:30.10:0,30,881	0/0:7,0:7:18.06:0,18,495	0/0:19,0:19:54.18:0,54,1556	0/0:15,0:15:39.12:0,39,1061	0/0:27,0:27:69.23:0,69,2020	0/0:23,0:23:69.24:0,69,2057	0/0:2,0:2:6.02:0,6,185
chr10	37285424	.	TCAC	T	12219.93	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=12.548;DP=495;FS=7.940;HRun=0;HaplotypeScore=124.0110;InbreedingCoeff=0.9795;MQ=84.18;MQ0=0;MQRankSum=-10.884;QD=33.76;ReadPosRankSum=2.565;VQSLOD=5.2444;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,26:29:43.22:796,43,0	1/1:1,8:9:21.07:333,21,0	0/0:16,0:16:33.11:0,33,636	0/0:26,0:26:51.11:0,51,948	0/0:22,0:22:63.22:0,63,1376	1/1:2,17:19:45.15:696,45,0	1/1:1,10:11:24.08:380,24,0	1/1:7,19:26:54.18:847,54,0	0/0:25,0:25:66.23:0,66,1434	1/1:4,18:22:54.18:845,54,0	1/1:0,16:16:27.09:428,27,0	1/1:2,13:15:39.13:618,39,0	1/1:2,11:13:33.11:522,33,0	1/1:1,11:12:30.10:476,30,0	1/1:1,15:16:42.14:665,42,0	0/0:26,0:26:72.25:0,72,1570	0/0:18,0:18:51.17:0,51,1076	1/1:0,13:13:30.10:476,30,0	1/1:2,18:20:51.17:784,51,0	1/1:3,12:15:33.11:509,33,0	1/1:3,27:30:47.08:760,47,0	1/1:2,15:17:33.11:520,33,0	1/1:0,4:4:9.03:143,9,0	1/1:2,25:27:42.22:665,42,0	1/1:1,11:12:21.07:333,21,0	1/1:4,13:17:39.13:618,39,0	1/1:2,13:15:39.13:616,39,0	1/1:0,4:4:12.04:190,12,0
chr10	37285427	.	CCA	C	1961.47	PASS	AB=0.988;AC=36;AF=0.643;AN=56;BaseQRankSum=15.611;DP=490;FS=9.583;HRun=0;HaplotypeScore=150.5720;InbreedingCoeff=0.3122;MQ=83.69;MQ0=0;MQRankSum=-10.736;QD=5.48;ReadPosRankSum=6.385;VQSLOD=2.0471;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:29:22.15:125,0,22	1/1:8,0:8:18.32:74,18,0	0/0:16,0:16:45.09:0,45,687	0/0:26,0:26:67.91:0,68,1085	0/0:23,0:23:69.24:0,69,1297	1/1:18,1:19:18.75:119,19,0	1/1:11,0:11:20.77:83,21,0	0/1:25,1:26:99:119,0,112	0/0:24,0:24:72.21:0,72,1321	0/1:22,0:22:12.13:126,0,12	1/1:16,0:16:23.37:93,23,0	1/1:14,1:15:0.29:99,0,0	0/1:12,0:12:4.91:82,0,5	1/1:11,0:11:26.05:104,26,0	1/1:16,0:16:36.43:145,36,0	0/0:26,0:26:78.25:0,78,1444	0/0:17,0:17:51.17:0,51,983	1/1:13,0:13:25.96:104,26,0	0/1:19,0:19:13.83:106,0,14	0/1:14,1:15:29.50:69,0,30	1/1:32,0:32:40.46:165,40,0	1/1:16,0:16:6.46:87,6,0	1/1:4,0:4:7.79:31,8,0	0/1:27,0:27:13.97:102,0,14	1/1:11,0:11:18.17:73,18,0	0/1:17,0:17:31.54:95,0,32	1/1:14,1:15:0.58:107,1,0	1/1:4,0:4:10.39:41,10,0
chr10	37285486	.	C	CTT	4771.81	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=9.008;DP=429;FS=6.258;HRun=1;HaplotypeScore=122.2722;InbreedingCoeff=0.8581;MQ=70.94;MQ0=0;MQRankSum=-4.033;QD=14.77;ReadPosRankSum=-4.891;VQSLOD=0.0914;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,4:18:17.57:318,18,0	1/1:3,3:7:15.49:169,15,0	0/0:14,0:11:14.72:0,15,263	0/0:12,0:12:29.62:0,30,327	0/0:26,0:26:78.22:0,78,1193	1/1:16,5:23:25.71:299,26,0	1/1:3,4:9:6.21:87,6,0	1/1:21,16:38:17.31:441,17,0	0/0:23,0:23:69.17:0,69,1034	1/1:15,2:19:7.13:176,7,0	1/1:15,11:27:42.66:481,43,0	1/1:9,1:11:10.19:81,10,0	1/1:8,1:9:3.41:71,3,0	1/1:5,0:5:8.40:80,8,0	1/1:10,1:12:16.44:144,16,0	0/0:20,0:20:51.17:0,51,813	0/0:11,0:11:30.10:0,30,481	1/1:10,5:15:31.13:312,31,0	1/1:10,3:14:15.76:160,16,0	1/1:10,5:17:40.36:398,40,0	1/1:3,4:7:7.91:75,8,0	1/1:9,2:11:11.31:116,11,0	1/1:4,3:7:20.68:179,21,0	1/1:8,3:11:7.42:119,7,0	1/1:5,2:12:18.38:176,18,0	1/1:16,7:23:40.47:413,40,0	1/1:10,6:18:30.79:334,31,0	1/1:4,2:9:15.30:142,15,0
chr10	37285540	.	GT	G	434.97	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=3.541;DP=455;FS=17.089;HRun=9;HaplotypeScore=71.1130;InbreedingCoeff=0.8386;MQ=72.07;MQ0=0;MQRankSum=0.965;QD=10.87;ReadPosRankSum=0.853;VQSLOD=1.1116;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:22:56.97:0,57,615	0/0:6,0:6:18.05:0,18,208	0/0:14,0:12:24.24:0,24,286	0/1:15,0:11:5.08:5,0,77	0/0:25,0:25:66.20:0,66,760	0/0:16,0:16:39.12:0,39,450	0/0:7,0:7:15.04:0,15,173	0/0:30,0:30:75.20:0,75,849	0/0:22,0:22:63.17:0,63,717	0/0:21,0:21:54.16:0,54,623	0/0:24,1:25:41.72:0,42,717	1/1:2,8:10:26.99:242,27,0	0/0:13,0:13:33.10:0,33,380	0/0:4,0:4:12.04:0,12,138	0/0:12,0:12:33.01:0,33,363	0/0:13,0:13:36.11:0,36,415	0/0:19,0:19:57.17:0,57,658	0/0:21,0:21:60.16:0,60,680	0/0:22,0:23:53.98:0,54,594	0/0:31,0:31:87.22:0,87,980	0/0:7,0:7:18.05:0,18,208	0/0:6,0:6:18.05:0,18,208	1/1:2,9:11:24.01:220,24,0	1/1:0,4:4:12.01:110,12,0	0/0:15,0:15:42.08:0,42,470	0/0:24,0:24:63.17:0,63,711	0/0:23,0:23:63.19:0,63,726	0/0:16,0:16:42.10:0,42,471
chr10	37285685	.	AAC	A	7612.35	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=9.324;DP=588;FS=1.993;HRun=0;HaplotypeScore=101.0502;InbreedingCoeff=0.9998;MQ=76.90;MQ0=2;MQRankSum=-0.476;QD=40.07;ReadPosRankSum=0.303;VQSLOD=6.2711;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:96.29:0,96,1742	1/1:1,12:12:30.10:442,30,0	0/0:21,0:21:57.19:0,57,987	0/0:18,0:18:51.17:0,51,923	0/0:28,0:28:84.27:0,84,1528	0/0:21,0:21:63.22:0,63,1177	0/0:20,0:20:57.20:0,57,1065	1/1:0,35:35:99:1517,105,0	0/0:28,0:28:75.26:0,75,1405	0/0:22,0:22:66.23:0,66,1235	0/0:20,0:20:57.19:0,57,1045	0/0:15,0:15:45.15:0,45,836	1/1:0,20:20:51.17:751,51,0	1/1:1,13:13:33.11:486,33,0	0/0:24,0:24:69.24:0,69,1274	0/0:22,0:22:66.23:0,66,1235	0/0:30,0:30:90.31:0,90,1677	0/0:25,0:25:66.23:0,66,1235	1/1:1,18:19:54.16:774,54,0	1/1:0,18:18:54.14:770,54,0	1/1:0,20:20:60.20:884,60,0	1/1:0,13:13:36.12:530,36,0	0/0:15,0:15:36.12:0,36,673	0/0:19,0:19:54.19:0,54,1011	1/1:0,18:18:51.17:751,51,0	0/0:20,0:20:60.21:0,60,1123	1/1:1,19:20:48.16:707,48,0	0/0:17,0:17:51.17:0,51,955
chr10	37285944	.	CT	C	3122.86	PASS	AB=0.586;AC=17;AF=0.304;AN=56;BaseQRankSum=4.502;DP=595;FS=3.227;HRun=11;HaplotypeScore=67.5985;InbreedingCoeff=0.8463;MQ=63.09;MQ0=2;MQRankSum=-0.717;QD=15.31;ReadPosRankSum=3.111;VQSLOD=4.4550;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,34:40:86.87:714,87,0	0/0:10,0:10:27.07:0,27,288	0/0:17,0:12:8.76:0,9,73	0/0:17,0:12:15.73:0,16,156	0/0:6,0:32:65.25:0,65,362	1/1:6,20:26:50.92:419,51,0	0/1:5,10:17:23.60:218,0,24	0/0:28,2:30:17.16:0,17,585	0/0:6,0:14:32.15:0,32,229	1/1:5,24:29:65.89:538,66,0	1/1:5,15:22:2.99:220,3,0	0/0:27,0:27:63.15:0,63,663	0/0:23,1:24:17.41:0,17,352	0/0:18,3:21:4.82:0,5,448	1/1:2,18:21:43.83:350,44,0	0/0:3,0:23:45.89:0,46,263	0/0:8,0:27:60.56:0,61,388	1/1:2,12:14:35.92:292,36,0	0/0:23,2:25:16.87:0,17,584	0/0:20,0:20:42.09:0,42,439	0/0:12,0:11:21.01:0,21,212	0/0:10,0:10:24.02:0,24,244	0/0:15,0:15:36.51:0,37,371	0/0:26,0:27:58.76:0,59,626	0/0:12,0:12:33.04:0,33,333	1/1:6,20:26:30.86:450,31,0	0/0:27,0:27:66.14:0,66,688	1/1:2,7:9:14.94:123,15,0
chr10	37286153	.	G	GT	6321.80	PASS	AB=1.000;AC=40;AF=0.714;AN=56;BaseQRankSum=5.874;DP=528;FS=8.848;HRun=5;HaplotypeScore=147.8575;InbreedingCoeff=0.8319;MQ=77.27;MQ0=5;MQRankSum=-5.138;QD=17.91;ReadPosRankSum=1.633;VQSLOD=3.3944;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:16:35.21:252,35,0	1/1:0,4:4:12.04:143,12,0	0/0:50,0:25:57.43:0,57,487	0/0:44,0:23:7.03:0,7,245	0/0:23,0:23:48.09:0,48,495	1/1:18,0:18:40.89:299,41,0	1/1:20,0:19:47.10:331,47,0	1/1:12,0:12:14.35:107,14,0	0/0:16,0:15:42.08:0,42,441	1/1:16,0:16:35.47:286,35,0	1/1:23,0:23:63.54:483,64,0	0/1:16,0:15:7.65:15,0,8	1/1:7,7:14:36.84:373,37,0	1/1:2,11:13:27.55:319,28,0	1/1:16,1:17:41.87:336,42,0	0/0:12,0:12:36.05:0,36,369	0/0:21,0:21:57.11:0,57,595	1/1:10,0:10:17.74:123,18,0	1/1:9,7:15:33.05:368,33,0	1/1:11,16:27:45.81:579,46,0	1/1:9,6:15:21.90:219,22,0	1/1:4,3:7:18.03:195,18,0	0/0:9,0:9:7.45:0,7,15	0/1:20,0:20:1.29:37,0,1	1/1:8,18:26:61.49:658,61,0	1/1:25,0:25:60.73:403,61,0	1/1:10,17:27:55.63:654,56,0	1/1:11,0:11:20.66:144,21,0
chr10	37286154	.	TTTTTGGG	T	4372.71	PASS	AB=0.945;AC=25;AF=0.446;AN=56;BaseQRankSum=-4.395;DP=525;FS=17.640;HRun=0;HaplotypeScore=203.8635;InbreedingCoeff=-0.2552;MQ=77.32;MQ0=5;MQRankSum=-9.535;QD=12.32;ReadPosRankSum=-3.508;VQSLOD=1.9841;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:16,0:16:99:218,0,215	0/0:4,0:4:7.50:0,8,57	0/0:50,0:25:60.15:0,60,1168	0/0:45,0:25:35.10:0,35,734	0/0:20,0:20:48.14:0,48,1556	0/1:18,0:18:99:297,0,200	0/1:20,0:19:99:475,0,145	1/1:3,9:12:29.88:485,30,0	0/0:16,0:15:42.12:0,42,1488	0/1:15,0:16:45.17:45,0,225	0/1:23,0:23:99:132,0,301	1/1:16,0:15:16.31:117,16,0	0/1:12,2:14:99:241,0,137	0/1:12,1:13:58.22:58,0,98	0/1:17,0:17:54.59:55,0,258	0/0:12,0:12:36.12:0,36,1309	0/0:21,0:21:57.19:0,57,1858	0/1:10,0:10:53.64:153,0,54	0/1:13,2:14:99:117,0,109	0/1:25,1:26:99:207,0,274	0/1:13,2:15:40.15:241,0,40	0/1:3,4:7:40.47:207,0,40	1/1:9,0:9:6.43:51,6,0	1/1:20,0:20:26.83:263,27,0	0/1:24,2:26:99:223,0,272	0/1:24,0:24:99:362,0,266	0/1:26,1:27:99:168,0,333	0/1:11,0:11:69.69:257,0,70
chr10	37286158	.	TGGG	T	6073.61	PASS	AB=0.926;AC=43;AF=0.768;AN=56;BaseQRankSum=9.049;DP=508;FS=21.402;HRun=3;HaplotypeScore=162.1874;InbreedingCoeff=0.8044;MQ=76.71;MQ0=7;MQRankSum=-2.438;QD=17.71;ReadPosRankSum=7.092;VQSLOD=0.1200;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:12,4:16:5.16:219,5,0	1/1:4,0:4:9.68:43,10,0	0/0:52,0:26:67.90:0,68,1254	0/0:47,0:24:39.06:0,39,678	0/0:17,0:17:48.16:0,48,1048	1/1:16,2:18:24.83:283,25,0	1/1:16,4:19:38.05:444,38,0	1/1:10,0:10:23.38:202,23,0	0/0:17,0:16:45.13:0,45,959	1/1:12,1:13:19.16:128,19,0	1/1:22,1:23:45.10:310,45,0	1/1:0,15:15:36.12:657,36,0	1/1:14,1:15:25.90:234,26,0	1/1:12,1:13:26.60:153,27,0	1/1:14,2:16:36.04:228,36,0	0/0:12,0:12:36.12:0,36,789	0/0:19,0:19:57.20:0,57,1280	1/1:6,3:8:15.33:174,15,0	1/1:15,0:13:9.67:111,10,0	1/1:22,3:25:10.31:234,10,0	1/1:12,0:12:0.52:172,1,0	1/1:7,0:7:13.51:116,14,0	1/1:0,9:9:24.08:447,24,0	1/1:0,19:19:42.14:776,42,0	1/1:23,2:25:25.76:227,26,0	1/1:20,4:24:52.87:468,53,0	0/1:23,2:25:15.25:172,0,15	1/1:5,5:10:27.12:276,27,0
chr10	37286164	.	T	TG	6400.27	PASS	AB=0.968;AC=33;AF=0.589;AN=56;BaseQRankSum=7.534;DP=526;FS=4.838;HRun=0;HaplotypeScore=152.8150;InbreedingCoeff=0.3307;MQ=70.14;MQ0=9;MQRankSum=-0.382;QD=18.66;ReadPosRankSum=8.618;VQSLOD=6.0167;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:6,12:18:22.93:489,23,0	1/1:4,0:4:9.76:37,10,0	0/0:54,0:23:57.06:0,57,647	0/0:48,1:22:28.81:0,29,287	0/0:16,0:16:45.15:0,45,629	1/1:2,13:15:42.03:585,42,0	1/1:5,13:17:45.14:618,45,0	0/0:12,0:12:11.72:0,12,82	0/0:17,0:16:45.11:0,45,598	1/1:3,11:14:35.79:489,36,0	1/1:3,20:23:38.57:871,39,0	1/1:16,0:15:33.26:220,33,0	0/1:15,0:15:33.34:49,0,33	0/1:13,0:13:13.24:55,0,13	1/1:3,13:16:31.15:606,31,0	0/0:15,0:15:43.30:0,43,532	0/0:20,0:20:57.12:0,57,737	0/1:6,4:9:29.21:226,0,29	0/1:19,0:16:33.29:63,0,33	0/1:28,0:27:93.21:103,0,93	0/1:10,0:10:12.97:23,0,13	0/1:8,0:8:20.23:33,0,20	1/1:9,0:9:22.24:141,22,0	1/1:21,0:21:41.15:296,41,0	0/1:24,0:24:39.55:118,0,40	1/1:4,22:26:72.07:971,72,0	0/1:27,0:27:85.50:112,0,86	1/1:5,4:9:26.80:296,27,0
chr10	37286903	.	AAAAC	A	10147.95	PASS	AB=0.571;AC=43;AF=0.768;AN=56;BaseQRankSum=11.180;DP=464;FS=38.518;HRun=0;HaplotypeScore=88.7900;InbreedingCoeff=0.8800;MQ=49.17;MQ0=7;MQRankSum=-3.440;QD=32.42;ReadPosRankSum=2.639;VQSLOD=2.8235;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:3,9:12:5.35:387,0,5	1/1:2,6:8:14.95:234,15,0	0/0:23,0:13:19.31:0,19,427	0/0:34,0:20:27.09:0,27,631	0/0:14,0:14:39.13:0,39,894	1/1:2,9:11:24.08:393,24,0	1/1:3,9:12:27.09:442,27,0	1/1:13,8:21:9.31:281,9,0	0/0:30,0:30:57.18:0,57,1270	1/1:10,12:21:42.14:688,42,0	1/1:3,11:14:27.09:430,27,0	1/1:4,10:14:27.09:442,27,0	1/1:0,7:7:18.06:295,18,0	1/1:3,6:9:8.21:282,8,0	1/1:1,15:16:39.10:610,39,0	0/0:23,0:23:54.18:0,54,1271	0/0:27,0:27:60.18:0,60,1391	1/1:2,8:10:21.07:344,21,0	1/1:10,2:11:9.03:147,9,0	1/1:3,21:24:60.16:953,60,0	1/1:2,13:15:33.11:541,33,0	1/1:5,16:21:42.10:646,42,0	1/1:5,8:13:27.05:429,27,0	1/1:1,9:10:24.08:393,24,0	1/1:3,12:15:42.14:688,42,0	1/1:7,9:16:27.09:442,27,0	1/1:5,13:18:36.12:590,36,0	1/1:3,10:13:30.10:491,30,0
chr10	37287918	.	G	GTAATATCCTGACTCAA	81148.50	PASS	AB=1.000;AC=45;AF=0.804;AN=56;BaseQRankSum=-2.579;DP=835;FS=4.606;HRun=0;HaplotypeScore=259.9101;InbreedingCoeff=0.8706;MQ=56.83;MQ0=0;MQRankSum=-16.923;QD=115.93;ReadPosRankSum=3.065;VQSLOD=4.4098;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,5:33:27.09:1612,27,0	1/1:6,3:18:21.07:1501,21,0	0/0:24,0:24:72.20:0,72,1904	0/0:17,0:16:35.42:0,35,836	0/0:18,0:18:42.13:0,42,1686	1/1:9,9:29:48.16:3418,48,0	1/1:13,8:31:51.17:3315,51,0	1/1:45,0:45:99:5483,123,0	0/1:35,0:35:99:132,0,3860	1/1:17,11:41:99:7347,123,0	1/1:9,4:15:36.08:2264,36,0	1/1:10,17:39:81.28:5401,81,0	1/1:11,16:34:81.28:5179,81,0	1/1:11,17:38:78.27:5495,78,0	1/1:11,21:64:86.95:6006,87,0	0/0:41,0:41:99:0,108,4341	0/0:35,0:35:99:0,105,4265	1/1:6,2:11:18.06:1241,18,0	1/1:13,1:25:60.13:2876,60,0	1/1:8,16:32:60.16:4085,60,0	1/1:3,5:14:18.06:1383,18,0	1/1:10,12:31:54.18:4070,54,0	1/1:7,10:24:51.04:3529,51,0	1/1:9,5:23:24.08:1738,24,0	1/1:8,7:30:36.12:2681,36,0	1/1:4,16:36:96.26:5757,96,0	1/1:15,18:43:81.28:5928,81,0	1/1:0,3:9:9.03:706,9,0
chr10	37288248	.	T	TC	5653.86	PASS	AB=0.732;AC=49;AF=0.875;AN=56;BaseQRankSum=-1.342;DP=592;FS=0.000;HRun=11;HaplotypeScore=131.0683;InbreedingCoeff=0.4345;MQ=68.67;MQ0=1;MQRankSum=-2.823;QD=9.92;ReadPosRankSum=4.199;VQSLOD=3.3765;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:37,0:37:55.92:337,56,0	1/1:14,0:14:34.44:186,34,0	0/0:7,0:8:8.94:0,9,84	0/0:13,0:12:14.63:0,15,100	0/1:10,2:12:17.50:24,0,18	1/1:19,0:19:42.01:195,42,0	1/1:25,0:25:53.17:251,53,0	1/1:34,0:35:45.18:197,45,0	0/1:7,4:12:34.23:49,0,34	1/1:22,0:22:50.84:229,51,0	1/1:18,0:18:42.33:210,42,0	1/1:21,0:21:36.58:174,37,0	1/1:16,0:16:30.99:148,31,0	1/1:29,0:29:70.67:353,71,0	1/1:25,0:25:53.41:253,53,0	1/1:10,3:13:0.75:123,1,0	0/1:8,11:19:48.49:101,0,48	1/1:26,0:26:49.12:283,49,0	1/1:23,0:23:48.41:211,48,0	1/1:18,0:18:19.92:197,20,0	1/1:32,0:34:63.31:290,63,0	1/1:23,0:23:57.10:305,57,0	1/1:28,0:28:68.26:362,68,0	1/1:20,0:20:33.93:165,34,0	1/1:30,0:30:71.66:398,72,0	1/1:22,0:22:54.21:243,54,0	1/1:17,0:17:39.50:193,40,0	1/1:12,0:12:31.74:177,32,0
chr10	37288256	.	C	CA	15400.96	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=1.053;DP=582;FS=2.672;HRun=0;HaplotypeScore=94.7169;InbreedingCoeff=0.9589;MQ=73.33;MQ0=1;MQRankSum=-6.637;QD=31.11;ReadPosRankSum=7.457;VQSLOD=4.3757;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,35:37:84.20:1029,84,0	1/1:0,14:14:36.11:452,36,0	0/0:12,0:11:32.60:0,33,286	0/0:15,0:14:29.06:0,29,248	0/0:11,0:11:10.26:0,10,117	1/1:0,17:17:45.14:568,45,0	1/1:1,24:25:57.12:717,57,0	1/1:1,25:26:78.10:855,78,0	0/0:11,0:11:4.55:0,5,96	1/1:0,23:23:66.13:776,66,0	1/1:0,20:20:48.05:586,48,0	1/1:1,17:18:39.06:489,39,0	1/1:1,11:12:33.04:418,33,0	1/1:0,26:26:75.24:936,75,0	1/1:1,26:27:57.18:723,57,0	0/0:14,0:14:16.06:0,16,179	0/0:24,0:24:23.39:0,23,300	1/1:1,24:25:72.18:885,72,0	1/1:0,21:21:63.14:739,63,0	1/1:3,15:18:38.90:522,39,0	1/1:2,28:30:72.20:880,72,0	1/1:0,22:22:60.19:759,60,0	1/1:0,29:29:72.23:911,72,0	1/1:0,17:17:36.11:450,36,0	1/1:0,33:33:75.23:947,75,0	1/1:1,24:25:69.15:819,69,0	1/1:0,15:15:42.13:529,42,0	1/1:0,15:15:33.10:414,33,0
chr10	37289043	.	A	ATAAC	29495.69	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-11.988;DP=548;FS=0.000;HRun=0;HaplotypeScore=66.4553;InbreedingCoeff=0.9910;MQ=69.63;MQ0=0;MQRankSum=-5.324;QD=64.40;ReadPosRankSum=2.461;VQSLOD=6.5905;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,26:26:54.19:1468,54,0	1/1:0,8:9:24.08:656,24,0	0/0:9,0:9:14.10:0,14,356	0/0:12,0:12:20.32:0,20,394	0/0:24,0:24:69.21:0,69,1253	1/1:3,21:25:57.20:1465,57,0	1/1:3,9:12:24.08:636,24,0	1/1:0,30:32:96.30:2296,96,0	0/0:14,0:14:42.14:0,42,803	1/1:0,28:29:87.28:2295,87,0	1/1:2,18:20:54.10:1334,54,0	1/1:3,14:19:33.11:859,33,0	1/1:0,15:15:42.14:1137,42,0	1/1:1,10:11:30.10:821,30,0	1/1:1,30:32:78.27:2115,78,0	0/0:12,0:12:36.12:0,36,698	0/0:19,0:19:57.14:0,57,994	1/1:0,17:18:42.14:1149,42,0	1/1:1,20:22:65.47:1503,65,0	1/1:1,23:24:69.24:1807,69,0	1/1:1,10:11:21.07:575,21,0	1/1:3,10:13:30.10:821,30,0	1/1:1,10:11:24.08:655,24,0	1/1:0,7:7:18.06:492,18,0	1/1:2,33:37:81.28:2164,81,0	1/1:5,26:34:82.39:2056,82,0	1/1:0,28:29:72.25:1969,72,0	1/1:0,21:21:45.15:1221,45,0
chr10	37289795	.	GGGGTGTGACGTGA	G	12027.16	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=15.789;DP=681;FS=1.237;HRun=0;HaplotypeScore=243.8888;InbreedingCoeff=0.9982;MQ=85.41;MQ0=0;MQRankSum=-15.782;QD=74.70;ReadPosRankSum=2.316;VQSLOD=4.6027;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,31:32:66.23:2260,66,0	0/0:8,0:8:24.08:0,24,1554	0/0:26,0:25:69.17:0,69,3393	0/0:25,0:25:66.23:0,66,2964	0/0:23,0:23:63.22:0,63,3800	1/1:2,16:18:39.13:1430,39,0	1/1:1,18:19:30.10:1044,30,0	0/0:32,0:32:84.29:0,84,4467	0/0:26,0:26:78.27:0,78,4905	1/1:7,25:32:87.27:3216,87,0	1/1:2,11:13:27.09:990,27,0	0/0:22,0:22:63.22:0,63,3975	0/0:26,0:26:75.24:0,75,4333	0/0:26,0:26:72.25:0,72,4279	1/1:4,26:30:63.22:2323,63,0	0/0:31,0:31:87.30:0,87,5233	0/0:32,0:32:93.30:0,93,5419	1/1:1,16:17:21.07:764,21,0	0/0:19,0:19:42.14:0,42,2375	0/0:13,0:13:39.13:0,39,2406	0/0:41,0:41:99:0,108,6091	0/0:22,0:22:57.18:0,57,3213	0/0:26,0:26:78.27:0,78,4719	0/0:46,0:46:99:0,123,7359	0/0:21,0:21:57.18:0,57,3117	0/0:28,0:28:81.27:0,81,4790	0/0:19,0:19:54.19:0,54,3340	0/0:8,0:8:24.08:0,24,1445
chr10	37291583	.	A	ATG	7894.30	PASS	AB=0.588;AC=12;AF=0.214;AN=56;BaseQRankSum=-7.359;DP=918;FS=12.045;HRun=0;HaplotypeScore=137.6956;InbreedingCoeff=0.7898;MQ=69.12;MQ0=3;MQRankSum=-1.193;QD=28.92;ReadPosRankSum=1.359;VQSLOD=6.1663;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:15,51:66:56.52:1989,57,0	0/0:11,0:11:33.09:0,33,396	0/0:49,0:35:40.14:0,40,546	0/0:38,0:31:20.87:0,21,645	0/0:26,0:27:66.04:0,66,790	1/1:3,15:18:36.12:590,36,0	1/1:12,28:40:38.07:1144,38,0	0/0:39,0:39:78.21:0,78,925	0/0:35,0:36:90.10:0,90,1077	1/1:10,24:35:27.15:1139,27,0	1/1:2,22:24:60.20:984,60,0	0/0:28,0:28:66.21:0,66,817	0/0:28,0:28:66.21:0,66,816	0/0:31,0:31:78.23:0,78,953	0/1:11,38:49:14.96:1330,0,15	0/0:40,0:41:99:0,114,1359	0/0:39,0:39:99:0,105,1251	0/1:14,25:41:29.05:719,0,29	0/0:25,0:24:54.13:0,54,630	0/0:20,0:20:54.16:0,54,657	0/0:54,0:56:99:0,135,1600	0/0:23,0:24:59.94:0,60,690	0/0:13,0:13:24.07:0,24,291	0/0:42,0:44:89.69:0,90,1066	0/0:23,0:24:63:0,63,731	0/0:26,1:28:31.85:0,32,872	0/0:35,0:35:99:0,99,1227	0/0:8,0:8:24.08:0,24,297
chr10	37294635	.	G	GTC	23563.63	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-13.279;DP=618;FS=8.358;HRun=0;HaplotypeScore=62.1938;InbreedingCoeff=0.9997;MQ=78.53;MQ0=0;MQRankSum=-4.480;QD=48.09;ReadPosRankSum=2.092;VQSLOD=5.6192;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,31:31:87.30:1595,87,0	1/1:1,12:13:36.12:660,36,0	0/0:25,0:25:57.75:0,58,847	0/0:18,0:18:48.15:0,48,654	0/0:25,0:25:72.24:0,72,1029	1/1:3,16:20:42.14:770,42,0	1/1:1,29:31:81.28:1469,81,0	1/1:5,23:30:78.24:1351,78,0	0/0:15,0:15:45.15:0,45,645	1/1:1,22:23:66.23:1204,66,0	1/1:0,18:18:48.16:880,48,0	1/1:0,21:21:57.20:1045,57,0	1/1:1,19:20:60.20:1079,60,0	1/1:1,21:22:51.17:934,51,0	1/1:1,28:29:81.28:1484,81,0	0/0:26,0:26:78.25:0,78,1099	0/0:19,0:19:51.14:0,51,710	1/1:0,11:11:27.09:494,27,0	1/1:1,15:18:47.76:871,48,0	1/1:0,21:22:54.19:990,54,0	1/1:0,29:31:78.27:1430,78,0	1/1:2,24:26:69.24:1263,69,0	1/1:1,20:21:54.19:990,54,0	1/1:0,21:21:51.17:935,51,0	1/1:2,23:25:66.23:1210,66,0	1/1:2,20:22:60.21:1100,60,0	1/1:1,21:23:66.23:1205,66,0	1/1:0,12:12:33.11:605,33,0
chr10	37294793	.	G	GAC	1142.22	PASS	AB=0.846;AC=16;AF=0.308;AN=52;BaseQRankSum=-5.036;DP=515;FS=1.644;HRun=0;HaplotypeScore=106.4252;InbreedingCoeff=0.1779;MQ=65.02;MQ0=5;MQRankSum=3.067;QD=4.94;ReadPosRankSum=-1.016;VQSLOD=2.5773;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:29,2:29:20.05:274,0,20	1/1:6,3:10:6.49:90,6,0	./.	./.	0/0:14,0:18:11.27:0,11,53	0/1:12,7:21:52.64:139,0,53	0/1:16,3:20:59.25:115,0,59	0/0:26,0:25:4.19:0,4,13	0/0:7,0:14:19.89:0,20,98	0/1:8,3:12:14.44:113,0,14	0/1:13,5:19:45.19:77,0,45	1/1:15,0:14:11.95:95,12,0	0/0:5,0:7:5.68:0,6,28	0/0:9,0:13:5.68:0,6,28	0/1:18,4:25:22.88:123,0,23	0/0:16,0:28:36.93:0,37,181	0/0:14,0:16:11.63:0,12,72	0/1:19,1:19:50.05:83,0,50	0/0:12,0:13:2.84:0,3,14	0/0:10,0:15:7.70:0,8,34	0/0:15,0:21:14.20:0,14,70	0/0:16,0:21:11.36:0,11,56	1/1:17,0:16:5.98:47,6,0	1/1:25,0:23:15:144,15,0	0/0:15,0:19:14.37:0,14,88	0/1:16,0:16:0:0,0,0	0/0:13,0:19:20.05:0,20,116	0/0:4,0:7:2.84:0,3,14
chr10	37294885	.	CA	C	2067.91	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=10.714;DP=609;FS=6.069;HRun=10;HaplotypeScore=90.9426;InbreedingCoeff=0.9957;MQ=65.83;MQ0=3;MQRankSum=0.343;QD=18.80;ReadPosRankSum=4.139;VQSLOD=4.2549;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,1:38:81.63:0,82,1068	0/0:9,0:9:27.07:0,27,299	0/0:33,1:26:34.03:0,34,370	0/0:24,0:13:30.02:0,30,301	1/1:4,22:26:62.73:524,63,0	0/0:20,0:20:57.15:0,57,630	0/0:18,0:18:48.09:0,48,518	0/0:31,0:31:72.18:0,72,781	1/1:4,15:19:44.99:390,45,0	0/0:28,1:29:52.15:0,52,796	0/0:15,0:16:41.95:0,42,446	0/0:5,0:16:25.56:0,26,128	0/0:14,1:15:19.14:0,19,429	0/0:16,0:16:39.11:0,39,431	0/0:18,1:19:24.96:0,25,480	1/1:6,29:35:77.91:664,78,0	1/1:3,27:30:74.98:651,75,0	0/0:24,0:24:63.82:0,64,662	0/0:26,0:26:66.16:0,66,715	0/0:29,0:29:72.18:0,72,787	0/0:18,0:18:48.11:0,48,520	0/0:10,0:10:26.82:0,27,253	0/0:0,0:15:35.48:0,35,170	0/0:1,0:21:37.06:0,37,190	0/0:19,0:19:54.62:0,55,598	0/0:4,0:19:44.41:0,44,233	0/0:22,1:23:34.10:0,34,598	0/0:1,0:9:22.93:0,23,133
chr10	37297233	.	C	CTG	985.56	PASS	AB=1.000;AC=19;AF=0.365;AN=52;BaseQRankSum=-4.718;DP=575;FS=3.208;HRun=0;HaplotypeScore=120.7688;InbreedingCoeff=0.5035;MQ=63.65;MQ0=18;MQRankSum=-0.479;QD=3.48;ReadPosRankSum=-3.616;VQSLOD=1.4999;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:32,0:32:3.08:121,3,0	0/0:6,0:6:2.92:0,3,17	./.	./.	0/1:24,0:24:14.99:15,0,35	1/1:28,0:27:20.90:192,21,0	1/1:22,2:24:0.34:57,0,0	0/1:32,0:31:0:0,0,0	1/1:18,0:18:6.42:57,6,0	1/1:21,4:25:18.39:151,18,0	0/0:14,0:17:2.99:0,3,24	0/0:13,0:14:17.78:0,18,129	0/0:8,0:9:5.80:0,6,24	0/0:17,0:14:5.89:0,6,38	1/1:13,3:16:9.30:195,9,0	0/1:20,0:20:18.21:18,0,18	1/1:29,0:28:7.03:97,7,0	1/1:31,3:33:14.10:248,14,0	0/0:21,0:20:1.20:0,1,3	0/0:17,0:14:10.11:0,10,74	0/0:16,0:14:2.99:0,3,23	0/0:13,0:12:9.28:0,9,59	0/0:22,0:21:11.95:0,12,91	0/0:18,0:16:17.77:0,18,131	0/0:14,0:14:5.89:0,6,39	0/0:25,0:24:19.34:0,19,132	0/0:13,0:13:11.66:0,12,72	0/0:10,0:9:4.21:0,4,25
chr10	37297295	.	GGC	G	3787.09	PASS	AB=0.896;AC=35;AF=0.625;AN=56;BaseQRankSum=7.472;DP=606;FS=13.899;HRun=0;HaplotypeScore=123.2360;InbreedingCoeff=0.3674;MQ=50.88;MQ0=17;MQRankSum=-0.225;QD=8.14;ReadPosRankSum=-1.031;VQSLOD=2.6028;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:45.85:0,46,515	1/1:11,0:11:8.94:67,9,0	0/0:32,0:9:26.38:0,26,304	0/1:40,1:19:11.17:11,0,420	1/1:13,8:21:21.06:309,21,0	0/0:18,0:18:2.66:0,3,212	0/0:21,0:21:37.07:0,37,424	0/1:23,2:23:99:120,0,103	1/1:0,21:22:6.37:61,6,0	0/0:11,0:11:32.37:0,32,415	0/0:13,0:13:12.02:0,12,155	0/1:15,0:15:16.01:39,0,16	1/1:15,1:14:15.81:162,16,0	1/1:15,5:15:26.93:221,27,0	0/0:17,0:17:22.31:0,22,312	1/1:3,23:25:2.34:28,2,0	1/1:24,7:30:80.99:1109,81,0	0/1:22,0:21:17.20:17,0,423	0/1:25,3:24:53.20:364,0,53	1/1:19,9:21:20.59:162,21,0	1/1:18,0:15:14.91:111,15,0	1/1:19,4:19:14.82:161,15,0	1/1:12,0:11:5.83:42,6,0	1/1:28,0:27:21.99:162,22,0	1/1:12,6:13:8.58:75,9,0	0/1:12,10:19:99:157,0,429	1/1:18,2:19:41.34:340,41,0	0/1:13,5:18:70.74:71,0,569
chr10	37297296	.	GCAGA	G	3112.89	PASS	AB=1.000;AC=33;AF=0.589;AN=56;BaseQRankSum=3.067;DP=600;FS=0.000;HRun=0;HaplotypeScore=135.4803;InbreedingCoeff=0.7404;MQ=51.03;MQ0=15;MQRankSum=0.846;QD=7.78;ReadPosRankSum=-1.820;VQSLOD=2.0986;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:27:45.67:0,46,932	1/1:4,7:11:8.99:116,9,0	0/0:32,0:9:12.04:0,12,180	0/1:41,0:19:6.38:6,0,209	0/1:21,0:21:11.08:61,0,11	0/0:17,0:17:20.73:0,21,439	0/0:22,0:22:35.50:0,36,747	1/1:14,11:23:30:357,30,0	1/1:22,0:22:2.46:28,2,0	0/0:11,0:11:27.09:0,27,574	0/0:13,0:13:15.03:0,15,287	1/1:6,9:15:6.09:59,6,0	1/1:15,1:14:9.11:169,9,0	1/1:17,3:15:27.07:389,27,0	0/0:17,0:17:27.08:0,27,506	0/1:26,0:25:0.02:0,0,1	1/1:31,0:30:6.33:147,6,0	0/0:20,0:19:33.11:0,33,761	1/1:27,1:24:29.91:330,30,0	1/1:24,4:21:17.71:225,18,0	1/1:6,11:14:15.05:240,15,0	1/1:22,1:19:14.47:189,14,0	1/1:3,8:11:5.91:96,6,0	1/1:2,25:27:24.55:384,25,0	1/1:17,1:13:8.94:143,9,0	0/0:22,0:19:27.09:0,27,626	1/1:16,4:19:32.60:378,33,0	0/0:18,0:18:39.13:0,39,904
chr10	37297486	.	T	TTTTG	4831.31	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-10.261;DP=657;FS=4.467;HRun=0;HaplotypeScore=111.0567;InbreedingCoeff=0.9916;MQ=61.52;MQ0=4;MQRankSum=-1.699;QD=45.58;ReadPosRankSum=0.113;VQSLOD=4.8893;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,99,1613	0/0:8,0:8:21.06:0,21,321	0/0:28,0:21:18.06:0,18,283	0/0:30,0:25:30.07:0,30,447	1/1:7,18:27:54.19:1317,54,0	0/0:31,0:31:66.21:0,66,1057	0/0:20,0:20:30.10:0,30,483	0/0:27,0:27:39.13:0,39,612	1/1:13,12:26:48.16:1081,48,0	0/0:23,0:23:57.19:0,57,926	0/0:19,0:19:45.14:0,45,712	0/0:16,0:16:30.10:0,30,492	0/0:14,0:14:33.07:0,33,511	0/0:23,0:23:45.15:0,45,737	0/0:20,0:20:51.15:0,51,788	1/1:4,15:20:42.14:991,42,0	1/1:12,21:31:60.21:1442,60,0	0/0:29,0:29:68.69:0,69,1082	0/0:36,0:35:69.20:0,69,1072	0/0:22,0:22:60.20:0,60,975	0/0:34,0:34:81.28:0,81,1325	0/0:18,0:18:33.09:0,33,513	0/0:22,0:23:66.21:0,66,1037	0/0:19,0:19:45.11:0,45,699	0/0:24,0:24:48.16:0,48,786	0/0:21,0:21:48.16:0,48,777	0/0:20,0:20:48.16:0,48,778	0/0:7,0:7:15.05:0,15,246
chr10	37298977	.	A	ATT	2333.16	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-4.406;DP=477;FS=3.142;HRun=10;HaplotypeScore=58.6032;InbreedingCoeff=0.8546;MQ=59.12;MQ0=3;MQRankSum=0.286;QD=26.22;ReadPosRankSum=0.853;VQSLOD=3.5613;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:23:59.85:0,60,592	0/0:9,0:9:17.97:0,18,183	0/0:9,0:4:5.87:0,6,46	0/0:7,0:4:2.98:0,3,26	1/1:4,15:21:40.65:551,41,0	0/0:16,0:16:42.07:0,42,421	0/0:11,0:11:30.07:0,30,305	0/0:42,0:42:99:0,99,1006	1/1:3,16:20:36.12:537,36,0	0/0:20,0:20:45.06:0,45,458	0/0:17,0:18:44.77:0,45,432	0/0:14,0:14:33.04:0,33,336	0/0:10,0:9:13.72:0,14,150	0/0:8,0:8:18.03:0,18,183	0/0:13,0:13:24.03:0,24,244	1/1:1,15:16:27.09:402,27,0	1/1:3,29:32:69:1001,69,0	0/0:26,0:25:60.09:0,60,610	0/0:21,0:21:57.10:0,57,580	0/0:22,0:23:50.84:0,51,571	0/0:10,0:10:18.01:0,18,183	0/0:2,0:2:3.01:0,3,31	0/0:9,0:9:21.02:0,21,214	0/0:18,0:18:39.01:0,39,387	0/0:13,0:13:8.15:0,8,198	0/0:24,0:25:44.75:0,45,505	0/0:25,0:26:68.81:0,69,666	0/0:15,0:15:42.09:0,42,427
chr10	37301440	.	GGCCTACACATGT	G	5915.23	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=11.570;DP=603;FS=3.634;HRun=0;HaplotypeScore=204.5860;InbreedingCoeff=0.9988;MQ=83.33;MQ0=0;MQRankSum=-11.528;QD=70.42;ReadPosRankSum=2.161;VQSLOD=4.2385;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,114,6346	0/0:9,0:9:27.09:0,27,1496	0/0:20,0:20:49.37:0,49,2344	0/0:26,0:26:72.72:0,73,3523	1/1:2,17:19:42.10:1441,42,0	0/0:13,0:13:33.11:0,33,1934	0/0:27,0:27:75.26:0,75,4115	0/0:31,0:30:90.25:0,90,4330	1/1:3,16:18:30.10:1119,30,0	0/0:19,0:19:57.20:0,57,3328	0/0:20,0:20:57.20:0,57,3369	0/0:16,0:16:45.15:0,45,2758	0/0:17,0:17:48.16:0,48,2865	0/0:21,0:20:60.21:0,60,3426	0/0:31,0:31:90.31:0,90,5307	1/1:4,25:29:65.99:2460,66,0	1/1:3,14:17:24.08:895,24,0	0/0:17,0:17:51.18:0,51,3036	0/0:25,0:25:72.23:0,72,3869	0/0:22,0:22:63.22:0,63,3365	0/0:26,0:26:69.24:0,69,4048	0/0:17,0:17:48.15:0,48,2755	0/0:24,0:24:72.25:0,72,3872	0/0:14,0:14:39.13:0,39,2378	0/0:13,0:13:39.13:0,39,2380	0/0:31,0:31:84.29:0,84,4955	0/0:28,0:27:78.27:0,78,4402	0/0:12,0:12:33.11:0,33,1822
chr10	37301627	.	C	CGCCTGCCTGCCT	5724.21	PASS	AB=1.000;AC=39;AF=0.813;AN=48;BaseQRankSum=-0.689;DP=317;FS=10.226;HRun=0;HaplotypeScore=125.8344;InbreedingCoeff=0.5722;MQ=78.70;MQ0=1;MQRankSum=-1.711;QD=24.89;ReadPosRankSum=-4.264;VQSLOD=1.7005;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:15,2:20:15.73:616,16,0	1/1:6,0:6:6.02:214,6,0	0/0:24,0:20:9.02:0,9,117	0/0:24,0:19:12.04:0,12,208	./.	1/1:8,3:12:13.60:592,14,0	1/1:17,0:17:17.49:589,17,0	1/1:9,0:9:8.06:127,8,0	0/0:6,0:7:11.25:0,11,185	1/1:1,2:3:9.03:384,9,0	./.	1/1:20,0:19:12.04:374,12,0	1/1:13,0:12:3.01:86,3,0	1/1:15,0:14:8.99:226,9,0	1/1:10,0:12:18.06:692,18,0	0/0:16,0:16:21.04:0,21,554	0/1:18,0:18:4.04:4,0,607	1/1:5,0:7:5.99:99,6,0	1/1:17,0:17:9.29:236,9,0	1/1:5,0:5:3.01:143,3,0	1/1:14,0:14:5.44:18,5,0	1/1:3,0:3:2.98:21,3,0	./.	1/1:15,0:17:24.97:738,25,0	1/1:3,0:3:3.01:105,3,0	1/1:7,0:6:6.02:175,6,0	1/1:12,0:11:9.92:286,10,0	./.
chr10	37301656	.	G	GCCTT	1259.47	PASS	AB=0.972;AC=27;AF=0.482;AN=56;BaseQRankSum=6.254;DP=340;FS=15.399;HRun=0;HaplotypeScore=96.9024;InbreedingCoeff=-0.0261;MQ=42.39;MQ0=13;MQRankSum=-3.674;QD=5.10;ReadPosRankSum=0.871;VQSLOD=1.1028;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:24:34.70:35,0,206	0/1:4,0:4:5.49:38,0,5	0/0:17,0:5:11.97:0,12,100	0/0:15,0:7:13.95:0,14,135	1/1:7,0:7:1.36:3,1,0	0/1:15,0:15:33.92:34,0,143	0/1:19,0:19:38.63:39,0,194	1/1:10,0:10:20.15:144,20,0	0/1:8,0:8:7.53:8,0,57	0/1:6,0:6:14.36:14,0,110	0/0:7,0:7:14.73:0,15,111	0/1:21,0:20:44.19:44,0,167	1/1:11,0:10:1.69:129,2,0	0/1:6,6:13:36.49:36,0,39	0/1:14,0:14:81.94:171,0,82	0/0:10,0:10:13.85:0,14,117	0/1:22,0:21:39.51:40,0,74	0/1:15,0:15:34.30:34,0,156	0/1:14,0:10:21:80,0,21	0/1:12,0:10:10.16:91,0,10	1/1:11,0:10:11.74:94,12,0	1/1:4,0:4:9.02:105,9,0	0/0:2,0:2:5.99:0,6,50	0/0:17,0:17:0.78:0,1,112	1/1:8,0:8:17.98:157,18,0	0/0:14,0:13:16.67:0,17,173	1/1:8,0:7:14.43:136,14,0	0/0:11,0:10:17.93:0,18,140
chr10	37301712	.	G	GA	1366.86	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=1.529;DP=380;FS=4.590;HRun=9;HaplotypeScore=56.5578;InbreedingCoeff=0.8644;MQ=75.28;MQ0=1;MQRankSum=-3.002;QD=25.31;ReadPosRankSum=1.283;VQSLOD=4.5254;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:59.97:0,60,520	0/0:5,0:5:11.97:0,12,99	0/0:26,1:17:2.36:0,2,92	0/0:21,0:10:11.99:0,12,103	1/1:1,12:13:30.04:318,30,0	0/0:20,0:20:56.99:0,57,494	0/0:9,0:9:23.98:0,24,208	0/0:13,0:13:35.98:0,36,312	1/1:1,12:13:33.09:365,33,0	0/0:11,0:11:26.99:0,27,234	0/0:14,1:15:5.81:0,6,279	0/0:15,0:15:35.98:0,36,312	0/0:8,0:8:20.99:0,21,182	0/0:12,0:12:14.99:0,15,130	0/0:16,0:16:41.99:0,42,364	1/1:0,12:12:33.09:365,33,0	1/1:2,14:16:44.91:478,45,0	0/0:20,0:20:51.83:0,52,433	0/0:11,0:11:29.78:0,30,245	0/0:11,0:11:26.99:0,27,234	0/0:11,0:11:17.98:0,18,156	0/0:4,0:4:11.99:0,12,103	0/0:3,0:3:6:0,6,52	0/0:18,0:18:38.98:0,39,338	0/0:16,0:16:44.97:0,45,386	0/0:17,0:17:44.99:0,45,391	0/0:10,0:10:29.99:0,30,260	0/0:9,0:9:23.98:0,24,208
chr10	37301840	.	GTT	G	3492.50	PASS	AB=0.535;AC=32;AF=0.571;AN=56;BaseQRankSum=-1.522;DP=427;FS=3.495;HRun=14;HaplotypeScore=62.1677;InbreedingCoeff=0.8422;MQ=71.65;MQ0=5;MQRankSum=-0.503;QD=14.80;ReadPosRankSum=-0.339;VQSLOD=2.5254;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:17:22.09:0,22,76	1/1:1,3:5:14.76:123,15,0	0/0:24,0:9:9.95:0,10,99	0/0:17,0:11:8.81:0,9,71	0/0:17,0:17:41.97:0,42,560	0/0:4,0:22:37.94:0,38,163	0/1:2,1:13:7.57:8,0,39	1/1:11,14:25:38.56:333,39,0	0/0:12,0:12:27.09:0,27,368	0/0:3,1:15:24.70:0,25,91	0/1:2,1:19:3.15:3,0,96	1/1:0,13:13:24.03:222,24,0	1/1:3,9:12:27.01:248,27,0	1/1:2,9:12:17.18:188,17,0	0/0:4,0:17:29.94:0,30,104	0/0:11,0:11:21.01:0,21,246	0/0:25,0:25:63.53:0,64,834	0/0:3,0:13:22.46:0,22,78	1/1:2,22:23:56.21:490,56,0	1/1:2,5:7:11.77:97,12,0	1/1:5,3:8:11.95:111,12,0	1/1:3,2:5:6:55,6,0	1/1:4,8:12:23.81:220,24,0	1/1:2,16:18:38.88:359,39,0	1/1:3,16:21:38.37:327,38,0	1/1:3,16:19:31.16:348,31,0	1/1:5,7:13:26.60:221,27,0	1/1:2,6:8:14.99:139,15,0
chr10	37304001	.	TG	T	3601.43	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=10.263;DP=610;FS=7.000;HRun=1;HaplotypeScore=61.6211;InbreedingCoeff=0.9759;MQ=87.01;MQ0=0;MQRankSum=-6.498;QD=35.66;ReadPosRankSum=4.198;VQSLOD=3.6816;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,150,2348	0/0:6,0:6:18.06:0,18,288	0/0:29,0:29:84.09:0,84,1243	0/0:34,0:33:90.30:0,90,1423	1/1:0,20:20:54.18:748,54,0	0/0:25,0:25:72.25:0,72,1145	0/0:36,0:36:99:0,108,1687	0/0:26,0:26:75.24:0,75,1164	1/1:0,25:25:57.19:797,57,0	0/0:9,0:9:27.09:0,27,432	0/0:9,0:9:27.09:0,27,429	0/0:23,0:23:69.22:0,69,1079	0/0:15,0:15:45.15:0,45,713	0/0:17,0:17:51.17:0,51,797	0/0:15,0:15:45.14:0,45,685	1/1:0,18:18:54.18:755,54,0	1/1:0,38:38:93.31:1301,93,0	0/0:24,0:24:72.25:0,72,1145	0/0:14,0:14:42.14:0,42,641	0/0:12,0:12:33.11:0,33,521	0/0:73,0:73:99:0,220,3494	0/0:4,0:4:12.04:0,12,181	0/0:4,0:4:12.02:0,12,167	0/0:26,0:26:75.26:0,75,1194	0/0:15,0:15:45.14:0,45,695	0/0:19,0:19:57.18:0,57,887	0/0:19,0:19:57.19:0,57,906	0/0:5,0:5:15.05:0,15,240
chr10	37304434	.	T	TTC	4515.06	PASS	AB=0.881;AC=24;AF=0.429;AN=56;BaseQRankSum=-2.836;DP=387;FS=5.046;HRun=0;HaplotypeScore=86.9446;InbreedingCoeff=0.7003;MQ=65.62;MQ0=8;MQRankSum=1.964;QD=21.71;ReadPosRankSum=-3.352;VQSLOD=4.3517;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:59.61:0,60,870	1/1:7,0:8:24.01:307,24,0	0/0:6,0:5:12.04:0,12,185	0/0:19,0:14:26.23:0,26,404	0/0:10,0:10:3.01:0,3,46	0/0:11,0:11:26.36:0,26,387	0/0:15,0:14:33.11:0,33,491	1/1:4,28:32:89.81:1334,90,0	0/0:7,0:7:18.06:0,18,229	0/0:12,0:12:33.11:0,33,510	0/0:10,0:10:21.07:0,21,318	0/1:17,0:15:22.57:25,0,23	1/1:7,0:8:24.01:332,24,0	1/1:2,0:5:12.29:80,12,0	0/0:13,0:13:29.79:0,30,434	0/0:8,0:7:18.06:0,18,246	0/0:12,0:9:30.02:0,30,345	0/0:14,0:13:39.12:0,39,561	1/1:2,16:17:47.26:703,47,0	1/1:1,11:12:11.91:94,12,0	1/1:28,0:29:77.79:1001,78,0	1/1:0,7:8:11.88:90,12,0	0/1:12,0:12:13.92:14,0,23	0/1:7,0:27:4.28:4,0,39	1/1:4,0:4:11.93:161,12,0	0/0:18,0:18:21.96:0,22,75	1/1:8,0:8:24.08:365,24,0	0/1:18,0:16:4.15:4,0,63
chr10	37304437	.	GCTCT	G	707.48	PASS	AB=1.000;AC=25;AF=0.658;AN=38;BaseQRankSum=2.278;DP=390;FS=7.053;HRun=0;HaplotypeScore=106.8101;InbreedingCoeff=0.4271;MQ=62.15;MQ0=10;MQRankSum=-1.857;QD=4.51;ReadPosRankSum=3.219;VQSLOD=1.5246;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:24:6.01:58,6,0	1/1:8,0:8:3:28,3,0	./.	./.	./.	./.	1/1:12,3:14:3.01:46,3,0	./.	1/1:7,0:7:9.01:84,9,0	1/1:12,0:14:2.79:57,3,0	./.	0/0:16,0:15:15.05:0,15,258	0/1:9,0:9:8.94:23,0,9	1/1:4,0:4:9.01:83,9,0	1/1:8,5:15:18.03:236,18,0	1/1:8,0:7:8.80:68,9,0	1/1:12,0:9:3:28,3,0	1/1:13,3:14:6.02:92,6,0	1/1:16,0:15:0.89:2,1,0	./.	0/0:28,0:28:0.92:0,1,8	1/1:9,0:8:3:27,3,0	0/0:12,0:12:6.02:0,6,72	0/0:25,0:26:9.03:0,9,168	./.	0/0:18,0:19:2.97:0,3,20	./.	0/0:20,0:17:0.47:0,0,1
chr10	37304442	.	CT	C	85.62	PASS	AB=0.857;AC=5;AF=0.089;AN=56;BaseQRankSum=4.643;DP=395;FS=9.236;HRun=1;HaplotypeScore=90.5617;InbreedingCoeff=0.4736;MQ=58.54;MQ0=12;MQRankSum=-4.344;QD=3.29;ReadPosRankSum=1.161;VQSLOD=-0.4745;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:24:55.02:0,55,670	0/0:7,0:7:15.02:0,15,190	0/0:5,0:4:12.04:0,12,153	0/0:16,0:11:30.08:0,30,359	0/0:7,3:9:2.04:0,2,6	0/0:13,0:13:20.97:0,21,267	0/0:16,0:15:31.61:0,32,366	0/0:29,0:28:80.02:0,80,971	1/1:3,3:6:12.76:84,13,0	0/0:16,0:16:38.62:0,39,421	0/0:13,0:13:24.06:0,24,291	0/0:17,0:15:27.08:0,27,360	0/0:9,0:9:24.95:0,25,286	0/0:4,0:4:2.57:0,3,6	0/0:16,0:16:21.45:0,21,207	1/1:4,4:7:0.49:71,0,0	0/1:10,2:9:27.47:41,0,27	0/0:16,0:14:32.01:0,32,356	0/0:14,0:13:38.77:0,39,415	0/0:10,0:10:3.01:0,3,39	0/0:25,0:24:48.02:0,48,586	0/0:9,0:8:3.90:0,4,39	0/0:15,0:15:32.64:0,33,397	0/0:26,0:26:9.03:0,9,121	0/0:5,0:5:15.04:0,15,175	0/0:23,0:23:56.64:0,57,617	0/0:9,0:9:26.59:0,27,276	0/0:21,0:18:46.92:0,47,552
chr10	37304444	.	CTCTCTCTCTCTCTCTCTCTCTCTCTCT	C	1628.19	PASS	AB=0.833;AC=7;AF=0.125;AN=56;BaseQRankSum=5.598;DP=391;FS=11.714;HRun=0;HaplotypeScore=242.1256;InbreedingCoeff=0.6398;MQ=57.00;MQ0=12;MQRankSum=-4.742;QD=47.89;ReadPosRankSum=2.321;VQSLOD=1.4151;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:23:54.18:0,54,3474	0/0:7,0:7:18.06:0,18,908	0/0:4,0:3:9.03:0,9,196	0/0:16,0:11:30.07:0,30,684	1/1:7,3:9:5.10:300,5,0	0/0:12,0:12:24.08:0,24,945	0/0:18,0:17:39.12:0,39,2273	0/0:28,0:27:78.26:0,78,2772	1/1:3,3:6:10.01:613,10,0	0/0:17,0:17:51.17:0,51,3312	0/0:14,0:14:30.10:0,30,1851	0/0:18,0:16:30.10:0,30,2868	0/0:9,0:9:27.09:0,27,1547	0/0:4,0:4:9.03:0,9,613	0/0:16,0:16:33.11:0,33,2069	1/1:4,4:7:5.41:621,5,0	0/1:8,2:8:28.54:222,0,29	0/0:17,0:15:42.14:0,42,2597	0/0:14,0:13:39.13:0,39,1520	0/0:10,0:10:4.83:0,5,70	0/0:24,0:23:51.17:0,51,2836	0/0:9,0:8:8.98:0,9,434	0/0:14,0:14:30.54:0,31,1664	0/0:27,0:27:12.93:0,13,1396	0/0:5,0:5:14.79:0,15,726	0/0:22,0:22:60.20:0,60,3971	0/0:7,0:7:21.07:0,21,892	0/0:21,0:18:51.17:0,51,2383
chr10	37305140	.	CCAA	C	851.71	PASS	AB=0.986;AC=17;AF=0.304;AN=56;BaseQRankSum=7.572;DP=497;FS=9.956;HRun=0;HaplotypeScore=111.5795;InbreedingCoeff=0.0608;MQ=70.13;MQ0=2;MQRankSum=0.799;QD=3.64;ReadPosRankSum=3.710;VQSLOD=1.5844;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:42.92:0,43,611	1/1:6,0:6:7.63:47,8,0	0/0:33,0:15:32.24:0,32,479	0/0:18,0:14:5.41:0,5,204	0/1:16,0:16:30.55:31,0,99	0/0:19,0:18:48.94:0,49,533	0/0:11,0:11:26.68:0,27,356	0/1:25,0:25:60.37:298,0,60	0/1:13,0:13:28.42:28,0,39	0/0:17,0:17:41.23:0,41,471	0/0:18,0:18:46.49:0,46,592	0/0:17,0:17:39:0,39,343	0/1:14,0:14:6.80:7,0,44	0/1:17,1:18:32.98:92,0,33	0/0:22,0:22:60.66:0,61,877	0/1:16,0:16:12.27:12,0,83	0/1:15,0:15:5.55:6,0,102	0/0:18,0:18:47.09:0,47,664	0/1:19,0:19:54.24:112,0,54	1/1:19,1:20:6.22:181,6,0	0/1:15,0:15:6.11:6,0,55	1/1:17,1:18:14.98:79,15,0	0/0:28,0:28:60.49:0,60,534	0/0:15,0:15:34.56:0,35,299	0/1:16,2:18:47.74:99,0,48	0/0:16,0:16:41.99:0,42,473	0/1:21,0:20:9.89:21,0,10	0/0:12,0:12:32.58:0,33,413
chr10	37305141	.	CAA	C	4741.94	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=-4.150;DP=502;FS=1.289;HRun=8;HaplotypeScore=91.3237;InbreedingCoeff=0.9211;MQ=70.08;MQ0=2;MQRankSum=-1.165;QD=19.35;ReadPosRankSum=2.331;VQSLOD=3.3411;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:38.06:0,38,482	1/1:1,5:6:15.05:180,15,0	0/0:33,0:15:32.64:0,33,397	0/1:16,0:14:12.72:13,0,123	1/1:9,4:15:16.97:124,17,0	0/0:20,0:20:43.79:0,44,353	0/0:10,0:11:26:0,26,239	1/1:3,22:25:62.73:694,63,0	1/1:3,6:12:15.40:134,15,0	0/0:19,0:19:46.07:0,46,396	0/0:22,0:22:58.38:0,58,512	0/0:1,0:16:26.09:0,26,85	1/1:3,11:14:18.05:219,18,0	1/1:3,15:18:36.09:423,36,0	0/0:21,0:21:60.26:0,60,593	1/1:6,9:15:15.46:277,15,0	1/1:8,5:15:20.95:183,21,0	0/0:18,0:19:46.16:0,46,449	1/1:3,16:19:48.11:563,48,0	1/1:1,19:20:46.44:551,46,0	1/1:2,11:13:21.06:256,21,0	1/1:2,16:18:33.05:385,33,0	0/0:0,0:27:44.50:0,45,145	0/0:3,0:15:20.53:0,21,67	1/1:4,13:17:27.04:302,27,0	0/0:17,0:18:39.65:0,40,299	1/1:2,18:20:36.10:439,36,0	0/0:14,0:14:38.55:0,39,354
chr10	37305901	.	TA	T	1911.17	PASS	AB=0.789;AC=36;AF=0.643;AN=56;BaseQRankSum=6.806;DP=441;FS=1.623;HRun=14;HaplotypeScore=50.5184;InbreedingCoeff=0.6133;MQ=53.88;MQ0=18;MQRankSum=-1.193;QD=7.10;ReadPosRankSum=3.995;VQSLOD=2.2202;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,2:37:45.19:0,45,533	1/1:1,3:4:5.94:41,6,0	0/0:27,0:5:8.92:0,9,68	0/0:21,0:12:21.72:0,22,149	1/1:5,0:19:26.46:76,26,0	0/0:19,2:17:6.46:0,6,200	0/0:12,1:12:9.39:0,9,219	1/1:12,7:16:20.80:143,21,0	1/1:3,0:7:6.10:18,6,0	0/0:18,0:17:20.89:0,21,175	0/1:17,2:20:21.97:22,0,235	1/1:0,6:6:14.88:103,15,0	1/1:1,9:9:14.86:103,15,0	1/1:1,5:6:8.87:61,9,0	0/0:14,0:12:21.02:0,21,195	1/1:3,0:8:14.26:41,14,0	1/1:7,1:28:51.87:162,52,0	0/0:20,0:16:26.87:0,27,237	0/1:7,9:16:23.60:111,0,24	0/1:5,8:11:4.16:115,0,4	1/1:7,10:16:23.80:164,24,0	1/1:2,7:8:14.62:94,15,0	1/1:2,6:8:14.86:103,15,0	0/1:6,0:4:5.91:13,0,6	1/1:0,12:11:26.78:185,27,0	1/1:6,14:19:38.56:261,39,0	1/1:5,7:14:21.90:135,22,0	1/1:6,12:16:1.87:157,2,0
chr10	37306642	.	C	CCT	12408.81	PASS	AB=0.933;AC=29;AF=0.518;AN=56;BaseQRankSum=-8.129;DP=478;FS=2.509;HRun=0;HaplotypeScore=72.2516;InbreedingCoeff=0.9269;MQ=75.61;MQ0=0;MQRankSum=-1.938;QD=49.64;ReadPosRankSum=1.035;VQSLOD=5.9535;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,120,1926	1/1:0,11:11:33.11:671,33,0	0/0:21,0:22:25.29:0,25,771	0/0:15,0:14:27.07:0,27,354	1/1:0,9:10:27.09:549,27,0	0/0:22,0:22:66.23:0,66,1077	0/0:19,0:19:54.17:0,54,845	1/1:0,21:21:60.12:1182,60,0	1/1:1,11:12:27.09:549,27,0	0/0:16,0:16:39.13:0,39,633	0/0:14,0:14:42.13:0,42,647	0/1:13,1:14:18.85:19,0,570	1/1:0,14:14:36.12:730,36,0	1/1:1,14:15:36.12:732,36,0	0/0:11,0:11:27.07:0,27,414	1/1:0,14:14:32.95:670,33,0	1/1:0,35:36:93.32:1889,93,0	0/0:23,0:23:69.24:0,69,1126	1/1:0,17:17:51.17:999,51,0	1/1:0,20:20:48.16:975,48,0	1/1:1,29:30:78.27:1585,78,0	1/1:1,5:6:18.06:340,18,0	0/0:9,0:9:27.09:0,27,440	0/0:15,0:15:42.14:0,42,679	1/1:1,13:14:39.13:793,39,0	0/0:13,0:13:36.12:0,36,587	1/1:2,12:16:36.12:727,36,0	0/0:8,0:8:24.08:0,24,391
chr10	37306760	.	CT	C	1339.68	PASS	AB=0.887;AC=24;AF=0.429;AN=56;BaseQRankSum=10.544;DP=396;FS=2.158;HRun=13;HaplotypeScore=60.7949;InbreedingCoeff=0.5278;MQ=65.89;MQ0=1;MQRankSum=0.654;QD=6.87;ReadPosRankSum=1.545;VQSLOD=2.3584;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,2:34:46:0,46,744	0/0:6,0:6:12.02:0,12,115	0/0:22,1:8:5.99:0,6,51	0/0:10,0:5:5.92:0,6,41	1/1:10,11:21:26.72:197,27,0	0/0:15,2:18:1.06:0,1,310	0/1:7,1:9:4.03:4,0,113	0/0:37,0:37:45.53:0,46,537	1/1:2,6:9:16.94:115,17,0	0/1:15,2:17:7.70:8,0,256	0/0:12,0:14:23.87:0,24,219	1/1:2,12:14:6.62:212,7,0	0/0:7,0:7:15.01:0,15,141	0/1:7,1:8:0.88:1,0,154	0/0:11,0:11:32.98:0,33,302	1/1:3,10:13:26.83:197,27,0	1/1:3,24:27:65.61:482,66,0	0/0:15,2:17:3.90:0,4,338	0/1:8,1:10:12.89:13,0,49	0/0:4,0:4:9.01:0,9,88	0/1:7,0:9:1.77:2,0,48	0/0:5,0:5:6.01:0,6,58	1/1:4,3:7:8.75:56,9,0	1/1:2,3:5:8.95:66,9,0	0/1:9,1:10:3.88:4,0,128	1/1:2,0:17:30.55:90,31,0	0/0:13,0:15:10.18:0,10,149	1/1:5,0:19:28.51:84,29,0
chr10	37306989	.	C	CA	398.03	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-3.288;DP=357;FS=2.067;HRun=9;HaplotypeScore=42.1455;InbreedingCoeff=0.8933;MQ=77.82;MQ0=0;MQRankSum=-0.529;QD=19.90;ReadPosRankSum=-0.445;VQSLOD=3.5608;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:44.99:0,45,391	0/0:5,0:5:12:0,12,104	0/0:15,0:14:17.98:0,18,151	0/0:18,0:16:24.17:0,24,226	0/0:12,0:12:29.98:0,30,257	0/0:16,0:16:38.99:0,39,339	0/0:6,0:7:17.03:0,17,136	0/0:22,0:22:47.95:0,48,415	0/0:14,0:14:26.96:0,27,229	0/0:20,0:20:17.59:0,18,311	0/0:15,0:15:41.99:0,42,365	1/1:1,9:10:27.07:298,27,0	0/0:15,0:15:41.99:0,42,365	0/0:4,0:4:11.97:0,12,99	0/0:14,0:14:16.92:0,17,264	0/0:9,0:9:18.47:0,18,158	0/0:19,0:19:50.99:0,51,443	0/0:20,0:20:50.92:0,51,442	0/0:18,0:18:38.97:0,39,339	0/0:16,0:16:32.97:0,33,286	0/0:15,0:15:38.99:0,39,339	0/0:3,0:3:9:0,9,78	1/1:3,2:5:6.02:66,6,0	1/1:0,5:5:15.04:166,15,0	0/0:15,0:15:41.99:0,42,365	0/0:13,0:13:32.99:0,33,287	0/0:9,0:9:20.99:0,21,182	0/0:7,0:7:17.99:0,18,156
chr10	37307134	.	A	AT	1536.87	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-6.512;DP=294;FS=0.000;HRun=6;HaplotypeScore=28.6733;InbreedingCoeff=0.8042;MQ=68.95;MQ0=0;MQRankSum=2.019;QD=27.44;ReadPosRankSum=3.227;VQSLOD=3.0737;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:36.06:0,36,359	0/0:3,0:3:9.02:0,9,92	0/0:7,0:6:9:0,9,88	0/0:6,0:5:6.01:0,6,61	1/1:1,14:15:39.09:474,39,0	0/0:18,0:18:39.09:0,39,398	0/0:6,0:5:12.03:0,12,122	0/0:28,0:28:78.16:0,78,789	1/1:1,5:6:12.04:151,12,0	0/0:13,0:13:39.09:0,39,397	0/0:10,0:10:27.05:0,27,269	0/0:5,0:5:15.03:0,15,153	0/0:9,0:9:27.06:0,27,275	0/0:2,0:2:6.01:0,6,61	0/0:4,0:4:12.03:0,12,122	1/1:0,9:9:24.08:302,24,0	1/1:1,25:26:62.87:765,63,0	0/0:8,0:8:18.04:0,18,184	0/0:20,0:20:57.12:0,57,577	0/0:7,0:7:18.04:0,18,184	0/0:3,0:3:6.01:0,6,61	0/0:3,0:3:6.01:0,6,61	0/0:5,0:5:6.01:0,6,61	0/0:6,0:6:15.03:0,15,153	0/0:6,0:6:15.03:0,15,153	0/0:17,0:17:51.12:0,51,520	0/0:19,0:19:45.10:0,45,458	0/0:20,0:20:51.11:0,51,520
chr10	37307389	.	GAT	G	1723.23	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=8.630;DP=424;FS=8.244;HRun=0;HaplotypeScore=48.6264;InbreedingCoeff=0.8973;MQ=55.27;MQ0=5;MQRankSum=0.757;QD=31.33;ReadPosRankSum=1.050;VQSLOD=5.1252;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,99,1766	0/0:3,0:3:9.03:0,9,162	0/0:9,0:9:22.32:0,22,371	0/0:5,0:2:0:0,0,0	0/0:24,0:24:72.22:0,72,1219	0/0:19,0:19:45.14:0,45,776	0/0:9,0:9:27.09:0,27,485	0/0:35,0:32:84.18:0,84,1365	0/0:9,0:9:27.09:0,27,486	0/0:11,0:11:30.10:0,30,538	0/0:13,0:13:39.13:0,39,702	1/1:1,9:10:24.07:320,24,0	0/0:10,0:10:27.09:0,27,485	0/0:7,0:7:21.07:0,21,360	0/0:12,0:12:33.11:0,33,588	0/0:15,0:15:42.12:0,42,698	0/0:34,0:34:95.67:0,96,1644	0/0:14,0:14:42.14:0,42,756	0/0:21,0:20:60.20:0,60,1053	0/0:13,0:13:39.13:0,39,702	0/0:10,0:10:24.06:0,24,402	0/0:1,0:1:3.01:0,3,54	1/1:1,8:9:21.07:294,21,0	1/1:1,4:4:9.03:126,9,0	0/0:24,0:24:66.23:0,66,1187	1/1:2,18:19:54.13:733,54,0	0/0:33,0:33:84.25:0,84,1450	1/1:1,10:11:29.92:419,30,0
chr10	37307634	.	GTTTAATGA	G	6119.58	PASS	AC=16;AF=0.308;AN=52;BaseQRankSum=11.913;DP=481;FS=20.248;HRun=0;HaplotypeScore=133.8023;InbreedingCoeff=0.9784;MQ=73.08;MQ0=0;MQRankSum=-11.277;QD=48.19;ReadPosRankSum=-1.357;VQSLOD=2.9784;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,108,4378	1/1:1,3:4:6.02:160,6,0	0/0:19,0:18:45.15:0,45,1608	0/0:12,0:12:24.95:0,25,655	0/0:26,0:26:72.23:0,72,2895	0/0:19,0:19:54.16:0,54,2083	0/0:10,0:10:27.09:0,27,1076	1/1:8,21:29:63.18:1492,63,0	0/0:19,0:19:48.16:0,48,1935	0/0:22,0:22:66.20:0,66,2678	0/0:18,0:17:51.18:0,51,2169	0/0:17,0:17:51.15:0,51,1939	1/1:3,9:12:24.08:640,24,0	1/1:4,9:13:21.07:482,21,0	0/0:20,0:20:54.19:0,54,2298	0/0:10,0:10:27.09:0,27,1139	0/0:25,0:25:72.23:0,72,2971	0/0:22,0:22:63.22:0,63,2523	1/1:3,13:15:36.11:835,36,0	1/1:1,8:9:18.06:480,18,0	./.	./.	0/0:17,0:17:45.14:0,45,1818	0/0:16,0:16:48.16:0,48,2025	1/1:2,12:14:27.09:633,27,0	0/0:30,0:30:90.31:0,90,3735	1/1:7,22:30:53.57:1396,54,0	0/0:11,0:11:30.10:0,30,1251
chr10	37309725	.	TAC	T	2169.38	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=9.782;DP=610;FS=9.627;HRun=0;HaplotypeScore=73.1237;InbreedingCoeff=0.9316;MQ=69.69;MQ0=2;MQRankSum=-1.276;QD=28.17;ReadPosRankSum=3.297;VQSLOD=4.5117;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:89.99:0,90,1434	0/0:6,0:6:18.06:0,18,292	0/0:31,0:28:62.96:0,63,961	0/0:27,0:21:51.16:0,51,776	1/1:3,20:22:45.14:573,45,0	0/0:26,0:26:69.21:0,69,1100	0/0:19,0:19:51.13:0,51,772	0/0:40,1:41:61.10:0,61,1465	1/1:2,19:21:48.15:611,48,0	0/0:31,0:31:75.26:0,75,1251	0/0:19,0:19:54.14:0,54,825	0/0:26,2:28:40.03:0,40,1181	0/0:14,0:14:39.12:0,39,623	0/0:13,0:13:39.13:0,39,649	0/0:29,0:29:84.27:0,84,1366	1/1:0,19:19:57.18:725,57,0	1/1:2,12:14:33.11:420,33,0	0/0:7,0:7:18.06:0,18,281	0/0:21,0:21:57.17:0,57,900	0/0:26,0:26:75.23:0,75,1195	0/0:19,0:18:45.13:0,45,715	0/0:17,0:17:48.15:0,48,770	0/0:25,0:25:57.18:0,57,928	0/0:15,2:17:0.96:0,1,559	0/0:13,0:13:39.11:0,39,622	0/0:40,0:40:99:0,111,1849	0/0:22,0:22:54.18:0,54,893	0/0:6,0:6:18.06:0,18,301
chr10	37309852	.	GC	G	7340.67	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=12.164;DP=714;FS=9.375;HRun=1;HaplotypeScore=75.2890;InbreedingCoeff=0.9992;MQ=77.06;MQ0=1;MQRankSum=-3.560;QD=39.68;ReadPosRankSum=2.980;VQSLOD=5.2292;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,34:34:96.32:1343,96,0	0/0:18,0:18:54.18:0,54,861	0/0:29,2:28:74.01:0,74,1107	0/0:35,1:34:86.40:0,86,1217	0/0:19,0:19:54.18:0,54,858	1/1:0,25:25:72.24:1006,72,0	1/1:0,28:28:78.26:1091,78,0	0/0:29,0:29:87.29:0,87,1364	0/0:25,0:25:75.24:0,75,1176	1/1:0,27:27:78.26:1090,78,0	1/1:0,19:19:54.18:755,54,0	0/0:28,0:28:84.26:0,84,1296	0/0:23,0:23:69.21:0,69,1053	0/0:26,0:26:78.27:0,78,1244	1/1:0,25:25:72.24:1007,72,0	0/0:18,0:18:54.18:0,54,863	0/0:36,0:36:99:0,105,1675	1/1:0,27:26:75.25:1049,75,0	0/0:12,0:12:36.12:0,36,576	0/0:20,0:20:57.18:0,57,883	0/0:61,0:60:99:0,178,2821	0/0:26,0:26:78.27:0,78,1243	0/0:14,0:14:42.13:0,42,647	0/0:26,0:26:78.22:0,78,1219	0/0:20,0:20:60.18:0,60,914	0/0:27,0:27:81.23:0,81,1266	0/0:27,0:27:81.28:0,81,1295	0/0:7,0:7:21.07:0,21,328
chr10	37311268	.	T	TA	1105.15	PASS	AB=0.542;AC=3;AF=0.054;AN=56;BaseQRankSum=-7.069;DP=719;FS=3.082;HRun=4;HaplotypeScore=69.2400;InbreedingCoeff=0.6582;MQ=71.15;MQ0=0;MQRankSum=-1.308;QD=26.95;ReadPosRankSum=-1.147;VQSLOD=2.3589;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,99,1100	0/0:9,0:9:27.03:0,27,281	0/0:20,0:20:34.85:0,35,438	0/0:15,0:15:29.69:0,30,344	0/0:34,0:34:93.16:0,93,1006	0/0:26,0:26:63.16:0,63,702	0/0:17,0:17:42.10:0,42,465	0/0:31,0:31:81.16:0,81,911	0/0:34,0:34:96.26:0,96,1078	0/0:26,0:26:69.19:0,69,775	0/0:26,0:26:69.20:0,69,781	0/0:27,0:27:81.20:0,81,893	0/0:27,0:27:78.21:0,78,876	0/0:16,0:16:42.10:0,42,466	0/0:47,0:47:99:0,135,1520	0/0:27,0:27:72.20:0,72,809	0/0:28,0:28:84.21:0,84,938	0/0:16,0:16:39.08:0,39,429	0/0:26,0:26:72.18:0,72,792	0/0:37,0:37:99:0,108,1215	0/0:19,0:19:51.08:0,51,543	0/0:28,0:28:72.17:0,72,802	0/0:16,0:16:39.10:0,39,434	0/0:24,0:24:72.17:0,72,785	0/0:25,0:25:72.19:0,72,806	0/1:5,27:32:14.76:924,0,15	0/0:41,0:41:99:0,120,1359	1/1:2,7:9:21.07:285,21,0
chr10	37312312	.	G	GA	1074.59	PASS	AB=0.809;AC=25;AF=0.446;AN=56;BaseQRankSum=0.353;DP=514;FS=2.448;HRun=15;HaplotypeScore=76.3086;InbreedingCoeff=0.2864;MQ=55.50;MQ0=16;MQRankSum=-0.828;QD=3.48;ReadPosRankSum=-5.461;VQSLOD=-0.7231;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:31:19.11:0,19,184	0/1:6,4:9:20.70:60,0,21	0/0:15,0:7:5.56:0,6,35	0/1:4,0:5:1.06:1,0,22	1/1:10,2:24:17.58:110,18,0	0/0:21,0:22:24.24:0,24,137	0/0:15,0:14:30.41:0,30,173	0/1:22,4:26:40.74:110,0,41	1/1:4,1:13:15.07:95,15,0	0/1:19,2:24:10.75:11,0,146	0/1:15,1:17:17.88:18,0,54	0/0:10,0:10:11.56:0,12,69	0/1:5,8:12:10.43:22,0,10	0/1:6,5:10:9.76:41,0,10	0/0:9,0:11:17.74:0,18,89	1/1:4,0:11:5.68:28,6,0	1/1:8,11:19:5.98:120,6,0	0/0:19,0:22:47.19:0,47,268	1/1:15,3:20:8.50:163,9,0	1/1:16,3:20:11.17:119,11,0	0/1:12,7:16:9.06:35,0,9	1/1:13,14:28:2.05:140,2,0	0/0:16,0:20:23.36:0,23,125	0/0:14,0:15:19.65:0,20,113	1/1:9,11:19:11.99:101,12,0	0/0:27,0:30:7.10:0,7,111	0/1:17,2:20:84.64:85,0,86	0/0:7,0:9:12.77:0,13,55
chr10	37314435	.	TGCCGTA	T	4427.38	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=11.246;DP=595;FS=5.570;HRun=0;HaplotypeScore=125.7883;InbreedingCoeff=0.9998;MQ=78.77;MQ0=0;MQRankSum=-12.091;QD=45.64;ReadPosRankSum=5.619;VQSLOD=4.4993;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,120,4110	0/0:11,0:11:33.11:0,33,1196	0/0:13,0:13:33.11:0,33,1078	0/0:18,0:19:50.52:0,51,1704	1/1:3,31:34:54.19:1327,54,0	0/0:25,0:24:69.71:0,70,2407	0/0:24,0:24:69.24:0,69,2525	0/0:30,0:30:78.22:0,78,2380	1/1:0,18:18:48.16:1181,48,0	0/0:21,0:21:63.20:0,63,1937	0/0:16,0:16:45.15:0,45,1572	0/0:19,0:19:57.18:0,57,1959	0/0:14,0:14:39.13:0,39,1342	0/0:15,0:15:45.15:0,45,1606	0/0:25,0:25:75.24:0,75,2519	1/1:3,20:23:39.13:960,39,0	1/1:1,21:22:39.13:960,39,0	0/0:18,0:17:51.17:0,51,1744	0/0:19,0:19:57.20:0,57,1959	0/0:20,0:20:51.17:0,51,1707	0/0:25,0:25:75.23:0,75,2367	0/0:20,0:20:57.06:0,57,1918	0/0:21,0:21:60.21:0,60,2058	0/0:25,0:25:75.26:0,75,2668	0/0:18,0:18:54.19:0,54,1875	0/0:20,0:20:57.11:0,57,1881	0/0:24,0:24:69.22:0,69,2342	0/0:15,0:15:45.15:0,45,1438
chr10	37314719	.	T	TA	6884.91	PASS	AB=0.779;AC=32;AF=0.571;AN=56;BaseQRankSum=-12.425;DP=562;FS=0.731;HRun=10;HaplotypeScore=60.5210;InbreedingCoeff=0.8398;MQ=70.42;MQ0=1;MQRankSum=-1.453;QD=20.37;ReadPosRankSum=1.625;VQSLOD=5.8050;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:54.75:0,55,439	1/1:2,9:11:27.07:288,27,0	0/0:19,0:18:21.44:0,21,152	0/1:21,0:12:9.04:9,0,40	1/1:7,24:32:1.38:598,1,0	0/0:14,0:14:38.95:0,39,320	0/0:24,0:25:70.92:0,71,569	1/1:13,18:31:51.98:528,52,0	1/1:4,10:14:5.43:263,5,0	0/0:18,0:19:40.98:0,41,326	0/0:23,0:23:56.27:0,56,445	0/0:16,0:16:40.98:0,41,324	1/1:2,19:22:56.98:588,57,0	1/1:4,14:18:14.46:359,14,0	0/0:17,0:17:41.94:0,42,343	1/1:3,17:20:38.93:416,39,0	1/1:9,14:23:16.30:361,16,0	0/0:30,0:30:80.84:0,81,656	1/1:8,12:20:36.09:384,36,0	1/1:4,20:24:54.14:576,54,0	1/1:3,5:8:15.04:160,15,0	1/1:4,12:16:41.31:416,41,0	0/0:20,0:20:53.94:0,54,443	0/0:15,0:15:38.95:0,39,320	0/1:4,15:19:1.17:400,0,1	1/1:1,29:30:81.15:839,81,0	1/1:2,16:18:23.48:455,23,0	1/1:3,7:10:23.80:245,24,0
chr10	37315094	.	CAG	C	6682.54	PASS	AB=0.934;AC=30;AF=0.536;AN=56;BaseQRankSum=-16.370;DP=754;FS=26.927;HRun=0;HaplotypeScore=124.2870;InbreedingCoeff=-0.5723;MQ=58.14;MQ0=6;MQRankSum=1.576;QD=9.76;ReadPosRankSum=-9.598;VQSLOD=0.9077;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:40,1:41:99:243,0,284	0/1:8,1:9:54.70:110,0,55	0/0:34,0:17:34.49:0,34,489	0/0:35,0:20:32.74:0,33,546	0/1:38,2:40:99:455,0,203	0/1:20,0:20:99:147,0,151	0/1:21,1:22:65.63:66,0,246	0/1:36,0:35:88.66:472,0,89	0/1:27,1:28:62.08:62,0,339	0/1:31,1:33:99:289,0,241	0/1:29,3:32:99:165,0,290	1/1:1,21:22:30.03:429,30,0	0/1:15,2:17:90.88:91,0,223	0/1:17,3:20:99:235,0,162	0/1:33,0:33:95.42:95,0,430	0/1:22,2:24:99:206,0,240	0/1:24,2:26:99:134,0,334	0/1:33,2:35:99:273,0,314	0/1:26,0:24:99:211,0,127	0/1:24,2:26:99:228,0,232	0/1:31,1:32:99:233,0,171	0/1:25,0:25:99:134,0,277	1/1:0,21:21:27.98:411,28,0	1/1:0,22:22:39.13:593,39,0	0/1:20,0:20:32.26:32,0,241	0/1:6,24:29:8.79:692,0,9	0/1:27,2:28:99:119,0,392	1/1:2,14:16:30.31:557,30,0
chr10	37315848	.	C	CA	1277.78	PASS	AB=0.867;AC=35;AF=0.648;AN=54;BaseQRankSum=-1.704;DP=502;FS=0.000;HRun=17;HaplotypeScore=77.2901;InbreedingCoeff=0.1868;MQ=51.73;MQ0=50;MQRankSum=-1.662;QD=3.27;ReadPosRankSum=-1.806;VQSLOD=-0.5957;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:12,9:19:40.04:68,0,40	1/1:5,0:5:5.59:26,6,0	1/1:26,0:6:1.25:3,1,0	0/0:31,0:8:3.84:0,4,17	0/0:25,0:21:3.37:0,3,13	0/1:17,1:19:20.06:20,0,39	0/1:19,1:16:21.83:79,0,22	1/1:19,1:21:7.04:114,7,0	0/1:20,0:17:0.07:0,0,11	0/1:22,6:26:44.72:106,0,45	1/1:8,5:14:6.22:113,6,0	1/1:14,2:15:11.24:76,11,0	1/1:6,0:7:1.77:4,2,0	1/1:15,0:14:14.48:86,14,0	1/1:9,3:12:10.62:85,11,0	0/0:17,0:15:10.58:0,11,30	0/0:16,0:14:8.24:0,8,24	1/1:10,11:20:2.99:23,3,0	0/1:20,1:22:0.91:105,0,1	1/1:12,0:11:9.87:50,10,0	./.	1/1:16,3:22:8.67:108,9,0	0/1:15,1:14:3.31:44,0,3	0/1:9,3:12:13.08:73,0,13	1/1:13,0:15:24.02:133,24,0	0/0:16,0:16:10.92:0,11,61	1/1:13,0:15:21.44:112,21,0	0/1:7,1:9:7.73:8,0,48
chr10	37315862	.	AAAAG	A	386.94	PASS	AB=0.967;AC=7;AF=0.125;AN=56;BaseQRankSum=2.715;DP=456;FS=2.906;HRun=0;HaplotypeScore=98.9849;InbreedingCoeff=0.5470;MQ=58.73;MQ0=25;MQRankSum=-2.300;QD=5.03;ReadPosRankSum=2.394;VQSLOD=2.0787;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:16:30.10:0,30,644	0/0:5,0:3:6.02:0,6,131	0/0:13,0:5:13.76:0,14,116	0/0:22,0:14:19.87:0,20,183	0/1:16,2:17:1.47:150,0,1	0/0:19,0:18:35.98:0,36,575	0/0:23,0:18:50.95:0,51,769	0/0:26,0:25:64.83:0,65,853	0/1:21,0:18:45.47:63,0,45	0/0:27,0:27:75.20:0,75,1318	0/0:18,0:18:45.70:0,46,703	0/0:16,0:15:29.94:0,30,436	0/0:8,0:8:14.84:0,15,122	0/0:16,0:15:42.79:0,43,463	0/0:11,0:10:27.46:0,27,416	1/1:12,3:14:13.57:164,14,0	1/1:12,3:13:12.47:138,12,0	0/0:18,0:17:9.84:0,10,106	0/0:23,0:22:63.02:0,63,908	0/0:15,0:12:32.76:0,33,357	0/0:6,0:5:2.94:0,3,18	0/0:18,0:16:35.97:0,36,608	0/0:21,0:18:41.45:0,41,458	0/0:10,0:10:26.87:0,27,445	0/0:16,0:14:41.72:0,42,476	0/0:20,0:19:39.47:0,39,559	0/0:10,0:10:29.93:0,30,462	0/1:8,0:8:1.71:2,0,332
chr10	37315863	.	AAAG	A	632.79	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=2.740;DP=438;FS=9.370;HRun=0;HaplotypeScore=89.9239;InbreedingCoeff=0.8140;MQ=59.70;MQ0=16;MQRankSum=-2.050;QD=10.37;ReadPosRankSum=2.585;VQSLOD=2.1977;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:16:30.10:0,30,504	0/0:4,0:3:6.02:0,6,103	0/0:14,0:6:11.77:0,12,94	0/0:18,0:11:15.35:0,15,147	1/1:12,4:15:1.60:168,2,0	0/0:17,0:16:35.68:0,36,462	0/0:23,0:18:50.83:0,51,624	0/0:26,0:25:60.54:0,61,662	1/1:13,4:17:24.55:253,25,0	0/0:27,0:27:72.68:0,73,1051	0/0:18,0:18:45.23:0,45,565	0/0:17,0:16:32.77:0,33,376	0/0:8,0:8:14.58:0,15,100	0/0:16,0:15:40.50:0,40,364	0/0:11,0:10:27.36:0,27,335	1/1:11,2:13:20.70:194,21,0	1/1:7,8:13:17.53:165,18,0	0/0:18,0:17:6.45:0,6,69	0/0:22,0:22:59.04:0,59,665	0/0:13,0:12:30.58:0,31,290	0/0:6,0:5:2.94:0,3,18	0/0:17,0:16:32.17:0,32,461	0/0:22,0:19:39.67:0,40,371	0/0:10,0:10:23.91:0,24,343	0/0:16,0:14:32.43:0,32,336	0/0:18,0:17:36.42:0,36,445	0/0:10,0:10:27.08:0,27,346	0/0:8,0:8:13.07:0,13,278
chr10	37315903	.	AAAG	A	1565.39	PASS	AB=0.917;AC=29;AF=0.537;AN=54;BaseQRankSum=3.632;DP=251;FS=6.422;HRun=0;HaplotypeScore=54.4801;InbreedingCoeff=0.5367;MQ=48.79;MQ0=27;MQRankSum=-6.217;QD=15.81;ReadPosRankSum=-2.926;VQSLOD=1.7915;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:15:36.04:0,36,706	1/1:1,1:2:6.01:78,6,0	0/0:22,0:6:16.42:0,16,166	0/0:13,0:4:9.03:0,9,179	1/1:4,0:3:2.99:24,3,0	0/0:9,0:8:24.08:0,24,531	0/0:17,0:16:42.04:0,42,812	1/1:10,2:11:31.30:382,31,0	1/1:1,1:2:5.95:51,6,0	0/0:21,0:21:63.19:0,63,1352	0/0:12,0:11:33.09:0,33,738	0/1:6,0:6:28.32:28,0,35	1/1:1,3:4:8.24:113,8,0	1/1:1,3:4:8.94:121,9,0	0/0:12,0:10:30.10:0,30,709	./.	1/1:4,1:4:5.97:56,6,0	0/0:12,0:12:18.06:0,18,428	1/1:6,3:7:21:250,21,0	0/1:2,5:7:0.31:96,0,0	1/1:5,5:8:15.05:249,15,0	1/1:0,2:2:5.87:35,6,0	0/1:7,0:7:6.14:6,0,49	0/0:8,0:7:6.41:0,6,41	1/1:0,2:2:5.95:71,6,0	0/1:13,0:13:8.44:8,0,335	1/1:0,3:3:9.03:159,9,0	0/1:6,0:5:15.90:28,0,16
chr10	37315919	.	G	GA	800.23	PASS	AB=0.715;AC=16;AF=0.308;AN=52;BaseQRankSum=6.205;DP=310;FS=13.975;HRun=2;HaplotypeScore=69.3003;InbreedingCoeff=0.4043;MQ=37.02;MQ0=64;MQRankSum=-6.296;QD=12.50;ReadPosRankSum=-2.787;VQSLOD=0.5184;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:14:30.10:0,30,389	1/1:2,1:3:0.90:41,1,0	0/0:35,0:4:3.47:0,3,27	0/0:33,1:3:6.01:0,6,65	./.	0/0:10,0:8:20.96:0,21,272	0/0:17,0:13:30.05:0,30,370	0/0:6,1:4:9.03:0,9,120	1/1:1,0:1:2.04:6,2,0	0/0:21,0:20:60.19:0,60,775	0/0:14,0:13:26.86:0,27,324	0/1:4,3:7:11.12:75,0,11	0/1:3,3:6:33.63:107,0,34	0/1:3,2:5:31.25:63,0,31	0/0:11,0:9:24.08:0,24,311	./.	0/0:2,0:1:2.22:0,2,7	0/0:13,0:12:23.04:0,23,278	0/1:5,2:5:25.37:79,0,25	1/1:6,3:8:9.02:111,9,0	0/0:14,1:8:13.91:0,14,91	1/1:2,4:6:12.04:173,12,0	1/1:9,2:10:6:59,6,0	0/0:14,1:9:5.79:0,6,36	1/1:3,6:8:16.21:247,16,0	0/0:16,0:13:36.08:0,36,449	0/0:4,0:3:7.05:0,7,52	0/0:4,0:3:5.93:0,6,41
chr10	37315924	.	GGAGGAGGA	G	238.70	PASS	AB=0.979;AC=8;AF=0.143;AN=56;BaseQRankSum=4.674;DP=331;FS=1.839;HRun=0;HaplotypeScore=84.3721;InbreedingCoeff=0.2172;MQ=32.19;MQ0=77;MQRankSum=-3.487;QD=4.59;ReadPosRankSum=3.109;VQSLOD=1.4842;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:14:30.10:0,30,1198	0/0:3,0:3:5.85:0,6,51	0/0:39,0:1:0:0,0,0	0/0:40,0:2:5.51:0,6,76	0/0:3,0:1:2.22:0,2,7	0/0:10,0:8:20.94:0,21,648	0/0:18,0:14:32.97:0,33,767	0/0:9,0:5:7.60:0,8,58	0/1:5,0:4:12.05:60,0,12	0/0:22,0:21:63.22:0,63,2087	0/0:15,0:14:36.91:0,37,1064	0/0:6,1:7:14.96:0,15,198	0/1:5,0:5:16.83:75,0,17	0/0:5,0:5:5.06:0,5,22	0/0:10,0:8:24.08:0,24,1053	0/0:2,0:1:2.50:0,2,9	0/1:3,0:2:13.04:75,0,13	0/0:13,0:12:26.92:0,27,776	0/0:6,0:2:5.81:0,6,34	0/0:7,0:6:6.49:0,6,74	0/0:18,0:8:8.30:0,8,41	0/0:7,0:7:15.04:0,15,182	0/0:6,4:11:9.03:0,9,131	0/1:9,2:8:0:0,0,0	0/0:9,0:8:18.02:0,18,180	0/1:18,0:14:8.98:9,0,704	0/1:3,0:2:0.18:51,0,0	1/1:4,0:3:6.02:91,6,0
chr10	37315934	.	G	GA	112.22	PASS	AC=6;AF=0.111;AN=54;BaseQRankSum=3.856;DP=358;FS=0.000;HRun=2;HaplotypeScore=78.5823;InbreedingCoeff=0.5251;MQ=29.56;MQ0=93;MQRankSum=-2.195;QD=5.91;ReadPosRankSum=-2.195;VQSLOD=-0.2660;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:14:30.10:0,30,389	0/0:3,0:3:5.88:0,6,36	./.	0/0:46,0:2:4.26:0,4,40	1/1:4,1:3:6.02:80,6,0	0/0:12,0:10:18.49:0,18,223	0/0:15,0:11:24.08:0,24,307	0/0:8,0:4:5.82:0,6,43	1/1:8,2:9:15.28:127,15,0	0/0:18,0:17:48.16:0,48,623	0/0:16,0:15:28.71:0,29,338	0/0:7,0:7:11.89:0,12,100	0/0:5,0:5:7.59:0,8,80	0/0:6,0:6:5.55:0,6,51	0/0:10,0:8:24.08:0,24,312	1/1:3,1:3:5.54:25,6,0	0/0:2,0:2:4.05:0,4,13	0/0:14,0:13:26.98:0,27,317	0/0:8,0:3:8.70:0,9,49	0/0:6,0:5:4.77:0,5,31	0/0:20,0:9:2.98:0,3,22	0/0:6,0:6:14.19:0,14,113	0/0:14,0:13:7.53:0,8,62	0/0:16,0:10:2.80:0,3,16	0/0:10,0:9:17.99:0,18,160	0/0:14,0:9:22.73:0,23,215	0/0:5,0:2:8.24:0,8,41	0/0:6,0:2:5.09:0,5,19
chr10	37315935	.	AGGAGGAGGAGGAG	A	674.95	PASS	AB=0.831;AC=14;AF=0.250;AN=56;BaseQRankSum=4.679;DP=356;FS=3.199;HRun=0;HaplotypeScore=100.3256;InbreedingCoeff=0.1431;MQ=29.73;MQ0=89;MQRankSum=-3.573;QD=5.58;ReadPosRankSum=0.759;VQSLOD=2.0014;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:14:30.03:0,30,1230	0/0:3,0:3:8.76:0,9,51	0/0:46,0:1:2.90:0,3,16	0/1:45,0:2:0.84:1,0,18	1/1:5,0:3:1.89:6,2,0	0/0:12,0:10:20.69:0,21,632	0/0:16,0:12:22.03:0,22,622	0/0:8,0:4:5.96:0,6,43	0/1:9,1:9:46.18:93,0,46	0/0:17,0:16:48.08:0,48,1900	0/0:16,0:15:26.05:0,26,1151	0/1:5,1:7:12.06:12,0,26	0/1:3,2:5:2.29:108,0,2	0/1:3,3:6:4:4,0,13	0/0:9,0:8:24.08:0,24,1185	0/0:4,0:3:5.33:0,5,27	0/1:2,0:3:3.49:122,0,3	0/0:14,0:13:27.04:0,27,921	0/0:10,0:5:14.84:0,15,104	0/0:5,1:5:7.81:0,8,56	0/0:18,0:9:2.92:0,3,17	0/0:6,0:6:13.24:0,13,95	0/0:10,4:13:2.88:0,3,15	1/1:14,2:10:1.82:5,2,0	0/0:9,1:9:17.93:0,18,139	0/1:13,0:9:99:152,0,219	0/1:4,1:2:26.47:102,0,26	1/1:6,0:2:6.02:207,6,0
chr10	37315947	.	AG	A	199.87	PASS	AB=0.918;AC=9;AF=0.161;AN=56;BaseQRankSum=2.381;DP=364;FS=3.303;HRun=2;HaplotypeScore=78.2243;InbreedingCoeff=0.1972;MQ=29.77;MQ0=83;MQRankSum=-1.226;QD=2.70;ReadPosRankSum=2.328;VQSLOD=-0.0463;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,1:14:28.72:0,29,325	0/0:3,0:3:5.96:0,6,46	0/0:43,0:1:2.94:0,3,18	0/0:41,0:2:5.81:0,6,49	0/0:6,0:5:2.58:0,3,7	0/0:11,0:9:17.88:0,18,191	0/0:16,0:12:15.20:0,15,100	0/0:11,0:7:5.22:0,5,27	0/1:13,0:12:1.98:2,0,35	0/0:16,0:15:39.13:0,39,515	0/0:13,0:13:23.05:0,23,259	0/1:7,1:8:1.47:11,0,1	0/1:7,0:7:10.30:17,0,10	0/0:7,0:7:8.15:0,8,40	0/0:8,0:7:18.06:0,18,245	0/0:5,0:4:2.60:0,3,10	0/1:3,1:3:2.72:24,0,3	0/0:13,0:12:19.92:0,20,213	0/0:12,0:7:14.64:0,15,112	0/0:9,0:8:2.80:0,3,7	0/0:15,3:8:0.37:0,0,1	0/0:11,0:9:5:0,5,38	0/1:15,1:14:0.03:0,0,0	0/0:13,2:12:2.22:0,2,7	0/0:10,0:9:15.14:0,15,63	0/1:11,2:9:16.84:181,0,17	0/1:6,0:3:15.10:18,0,15	1/1:4,2:2:6.02:68,6,0
chr10	37315948	.	G	GA	312.01	PASS	AB=0.964;AC=12;AF=0.214;AN=56;BaseQRankSum=1.932;DP=375;FS=1.310;HRun=1;HaplotypeScore=80.5766;InbreedingCoeff=0.0834;MQ=29.96;MQ0=84;MQRankSum=-2.699;QD=3.22;ReadPosRankSum=1.368;VQSLOD=0.0345;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:15:28.72:0,29,325	0/0:3,0:3:5.65:0,6,27	0/0:43,0:1:2.94:0,3,18	0/0:41,0:2:5.81:0,6,49	1/1:6,0:5:2.33:8,2,0	0/0:11,0:9:18.01:0,18,206	0/0:15,0:12:15.34:0,15,109	0/1:13,0:9:17.73:28,0,18	0/1:14,0:13:4.01:4,0,34	0/0:16,0:15:39.13:0,39,515	0/0:11,0:13:23.64:0,24,273	0/1:9,0:8:5.48:5,0,20	0/1:7,0:7:16.32:16,0,23	0/0:7,0:7:7.25:0,7,28	0/0:8,0:7:18.06:0,18,241	0/0:6,0:5:3.45:0,3,22	0/1:4,0:3:13.95:24,0,14	0/0:7,0:12:21.02:0,21,241	0/0:12,0:7:14.55:0,15,98	0/0:11,0:10:2.80:0,3,7	0/0:19,1:9:0.39:0,0,1	0/0:11,0:9:4.87:0,5,38	0/1:17,0:15:0.03:0,0,0	0/0:15,2:12:2.84:0,3,18	0/0:10,0:9:15.26:0,15,73	0/1:9,6:11:12.57:271,0,13	0/1:6,0:3:15.10:19,0,15	1/1:6,0:2:6.02:68,6,0
chr10	37317977	.	CT	C	1132.66	PASS	AB=0.719;AC=33;AF=0.611;AN=54;BaseQRankSum=3.726;DP=406;FS=0.000;HRun=13;HaplotypeScore=47.3512;InbreedingCoeff=0.3428;MQ=35.95;MQ0=60;MQRankSum=-2.902;QD=3.71;ReadPosRankSum=0.628;VQSLOD=-0.5963;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,2:23:50.91:0,51,479	1/1:0,0:5:6.58:19,7,0	0/0:1,0:1:0:0,0,0	./.	0/1:7,8:13:25.91:120,0,26	0/0:16,0:13:29.96:0,30,272	0/0:10,0:6:12.01:0,12,112	0/1:22,0:23:20.88:21,0,38	1/1:5,8:11:17.90:131,18,0	0/0:14,0:11:14.96:0,15,130	0/0:11,0:9:18.03:0,18,175	1/1:5,9:13:0.52:73,1,0	0/1:1,0:2:1:1,0,9	1/1:2,0:3:4.07:12,4,0	0/0:11,0:11:23.87:0,24,217	1/1:3,6:8:14.91:109,15,0	1/1:8,13:17:4.87:188,5,0	0/1:30,3:23:17.90:18,0,298	1/1:11,1:16:22.20:77,22,0	1/1:6,0:10:12.21:35,12,0	1/1:2,0:2:4.07:12,4,0	1/1:0,0:1:2.04:6,2,0	1/1:3,3:7:10.99:71,11,0	1/1:7,6:8:17.90:131,18,0	1/1:11,0:18:20.12:58,20,0	0/1:5,8:11:34.51:107,0,35	0/1:5,0:14:3.68:39,0,4	0/1:14,8:17:75.19:78,0,75
chr10	37318531	.	AAAAG	A	62.69	PASS	AB=0.970;AC=9;AF=0.161;AN=56;BaseQRankSum=0.455;DP=519;FS=27.017;HRun=0;HaplotypeScore=92.2231;InbreedingCoeff=0.0142;MQ=52.20;MQ0=28;MQRankSum=-8.104;QD=0.42;ReadPosRankSum=-3.199;VQSLOD=-0.3745;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:39:77.24:0,77,1274	0/0:7,0:7:19.48:0,19,148	0/0:36,0:10:15.02:0,15,144	0/1:28,0:12:0.45:0,0,215	0/1:16,4:19:4.60:5,0,195	0/0:18,0:17:7.39:0,7,257	0/0:16,0:16:12.02:0,12,308	0/0:33,0:32:64.11:0,64,565	0/1:20,0:16:29.95:30,0,163	0/0:18,0:17:20.40:0,20,351	0/0:16,0:16:14.57:0,15,303	0/0:15,0:15:13.87:0,14,169	0/0:9,0:9:13.42:0,13,102	0/0:13,0:13:24.38:0,24,191	0/1:14,0:14:3.27:3,0,248	1/1:10,0:9:4.30:44,4,0	0/1:22,1:23:77.60:78,0,184	0/0:29,0:23:32.18:0,32,556	0/0:28,0:26:28.49:0,28,435	0/0:8,0:8:0.63:0,1,78	0/0:10,0:9:20.72:0,21,183	0/0:9,0:9:2.72:0,3,124	0/0:10,0:9:6.27:0,6,116	0/0:15,0:12:10.19:0,10,90	0/0:17,0:17:41.41:0,41,297	0/1:16,0:15:1.09:1,0,235	0/0:20,0:19:47.49:0,47,366	0/1:19,0:17:17.59:18,0,163
chr10	37318952	.	GA	G	2691.59	PASS	AB=0.743;AC=33;AF=0.611;AN=54;BaseQRankSum=-6.302;DP=471;FS=14.501;HRun=13;HaplotypeScore=57.6130;InbreedingCoeff=0.2043;MQ=43.03;MQ0=21;MQRankSum=2.147;QD=7.65;ReadPosRankSum=2.447;VQSLOD=0.8744;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:17,13:28:20.26:78,0,20	1/1:2,2:4:2.98:22,3,0	./.	0/0:23,0:3:2.84:0,3,14	0/0:12,0:27:29.95:0,30,157	1/1:13,8:21:33.05:246,33,0	1/1:9,2:11:13.71:80,14,0	0/1:14,13:25:37.10:211,0,37	0/0:4,0:9:5.68:0,6,28	1/1:9,11:19:28.49:216,28,0	0/1:11,13:24:66.86:199,0,67	0/0:1,0:6:8.03:0,8,34	1/1:4,3:9:8.55:68,9,0	1/1:6,9:13:31.37:221,31,0	1/1:6,12:18:24.71:266,25,0	0/1:5,1:10:10.22:10,0,46	0/0:8,1:22:6.21:0,6,128	1/1:7,9:15:20.85:153,21,0	0/1:9,7:17:1.77:152,0,2	0/1:16,8:23:2.71:165,0,3	1/1:4,4:7:2:74,2,0	1/1:7,6:13:23.81:174,24,0	0/1:3,0:7:0.89:1,0,32	0/0:1,0:3:2.84:0,3,14	1/1:11,9:19:4.32:197,4,0	0/1:9,12:22:5.65:147,0,6	1/1:10,13:22:1.37:163,1,0	0/1:5,4:7:9.89:10,0,76
chr10	37321114	.	CT	C	833.29	PASS	AB=0.842;AC=21;AF=0.375;AN=56;BaseQRankSum=-1.955;DP=496;FS=4.794;HRun=15;HaplotypeScore=74.0996;InbreedingCoeff=0.2619;MQ=57.44;MQ0=16;MQRankSum=2.014;QD=3.20;ReadPosRankSum=2.133;VQSLOD=0.2444;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:29,3:34:4.23:4,0,289	0/1:3,3:5:17.45:30,0,17	0/0:21,0:8:4.04:0,4,13	0/0:24,1:8:0.02:0,0,8	0/0:13,0:20:36.02:0,36,207	0/0:17,1:18:16.70:0,17,262	0/0:13,2:15:10.64:0,11,203	1/1:19,11:30:2.10:133,2,0	0/0:3,0:10:11.45:0,11,59	0/0:17,0:18:35.74:0,36,288	0/1:8,1:8:2.67:3,0,93	0/1:9,0:9:17.96:18,0,38	0/1:6,4:10:11.26:13,0,11	1/1:7,6:14:17.16:132,17,0	0/0:19,0:19:7.35:0,7,146	0/0:17,0:19:29.20:0,29,186	0/0:21,0:30:60.38:0,60,386	0/1:26,2:25:5.44:5,0,183	0/1:13,4:18:0.74:81,0,1	1/1:1,9:10:19.95:131,20,0	0/1:9,4:13:21.78:43,0,22	1/1:5,19:23:9.06:184,9,0	0/1:16,1:16:7.27:7,0,65	0/0:15,1:16:20.95:0,21,174	1/1:2,8:11:10.87:64,11,0	0/0:17,0:17:1.83:0,2,172	1/1:14,5:23:7.52:156,8,0	0/0:2,0:2:6:0,6,53
chr10	37321215	.	G	GC	3671.08	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=-9.581;DP=478;FS=0.893;HRun=5;HaplotypeScore=49.4211;InbreedingCoeff=0.8990;MQ=59.83;MQ0=25;MQRankSum=2.080;QD=22.94;ReadPosRankSum=-0.893;VQSLOD=2.3008;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:29:62.99:0,63,628	0/1:2,0:2:11.97:12,0,16	0/0:21,0:12:16.22:0,16,149	0/0:6,0:2:6.01:0,6,63	0/0:22,0:21:51.05:0,51,523	0/0:7,0:6:12.50:0,12,130	0/0:19,0:18:42.03:0,42,427	1/1:6,13:19:44.10:429,44,0	0/0:10,0:9:17.99:0,18,180	0/0:15,0:15:41.98:0,42,423	0/0:23,0:23:65.88:0,66,674	0/0:20,0:20:47.90:0,48,486	1/1:1,12:13:30.09:386,30,0	1/1:5,15:20:27.49:333,27,0	0/0:23,0:22:50.95:0,51,534	0/0:14,0:13:32.98:0,33,321	0/0:32,0:29:78.14:0,78,817	0/0:16,0:14:33.05:0,33,342	1/1:4,13:16:39.39:402,39,0	1/1:2,10:10:21.07:274,21,0	1/1:2,21:21:48.16:630,48,0	1/1:2,14:16:36.06:449,36,0	0/0:11,0:11:18.08:0,18,221	0/0:13,0:13:39.06:0,39,403	1/1:3,18:21:36.12:473,36,0	0/0:27,0:25:72.04:0,72,720	1/1:3,12:15:19.92:282,20,0	0/0:8,0:6:15.01:0,15,149
chr10	37321397	.	TCTGGC	T	14300.95	PASS	AB=0.542;AC=37;AF=0.661;AN=56;BaseQRankSum=9.846;DP=468;FS=0.000;HRun=0;HaplotypeScore=98.0452;InbreedingCoeff=0.8953;MQ=76.55;MQ0=0;MQRankSum=-6.884;QD=44.55;ReadPosRankSum=3.105;VQSLOD=4.9732;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:78.26:0,78,2265	1/1:0,8:8:21.54:431,22,0	0/0:15,0:15:36.12:0,36,963	0/0:15,0:15:39.02:0,39,919	1/1:2,17:19:39.05:693,39,0	0/0:11,0:11:33.11:0,33,985	0/0:21,0:21:54.17:0,54,1573	1/1:10,20:30:58.06:1107,58,0	1/1:0,16:16:45.15:923,45,0	0/0:7,0:7:18.03:0,18,423	0/0:4,0:4:6.01:0,6,117	1/1:2,20:22:51.18:1046,51,0	1/1:3,18:21:45.15:900,45,0	1/1:1,14:15:39.13:800,39,0	0/0:20,0:20:60.21:0,60,1763	1/1:0,20:20:51.18:1046,51,0	1/1:3,22:25:60.21:1230,60,0	0/0:24,0:23:66.23:0,66,2001	1/1:5,14:19:39.12:748,39,0	1/1:1,12:13:33.08:590,33,0	1/1:3,12:15:27.05:512,27,0	1/1:1,13:14:21.03:366,21,0	1/1:0,7:7:12:205,12,0	1/1:1,19:20:51.17:1022,51,0	1/1:1,14:15:36.12:738,36,0	0/1:2,11:13:58.29:509,0,58	1/1:0,21:21:54.14:1065,54,0	1/1:1,7:8:18.06:369,18,0
chr10	37322393	.	AAAACAAAACAAAACAAAAC	A	2761.69	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=9.182;DP=598;FS=6.891;HRun=0;HaplotypeScore=241.9797;InbreedingCoeff=0.9666;MQ=52.26;MQ0=16;MQRankSum=-7.263;QD=31.74;ReadPosRankSum=1.312;VQSLOD=1.8435;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:60.20:0,60,4749	0/0:11,0:10:27.09:0,27,1761	0/0:21,0:5:15.05:0,15,700	0/0:39,0:8:9.75:0,10,413	1/1:7,24:31:43.65:1230,44,0	0/0:16,0:15:39.13:0,39,2712	0/0:35,0:35:66.21:0,66,4433	0/0:25,0:23:54.17:0,54,2815	1/1:7,4:11:12.04:399,12,0	0/0:33,0:33:78.27:0,78,5879	0/0:17,0:17:45.14:0,45,3062	0/0:15,0:15:39.13:0,39,2672	0/0:20,0:20:39.50:0,40,2702	0/0:19,0:19:51.17:0,51,4117	0/0:19,0:18:39.13:0,39,2633	1/1:10,9:19:24.08:731,24,0	1/1:9,17:24:15.05:557,15,0	0/0:24,0:24:47.37:0,47,2889	0/0:14,0:13:30.09:0,30,1204	0/0:18,0:18:36.12:0,36,2466	0/0:25,0:24:51.17:0,51,2387	0/0:18,0:17:33.11:0,33,2390	0/0:18,0:17:42.14:0,42,2988	0/0:30,0:30:72.22:0,72,4388	0/0:18,0:17:42.14:0,42,3613	0/0:15,0:14:39.10:0,39,2307	0/0:17,0:17:51.16:0,51,4129	0/0:14,0:13:21.74:0,22,2530
chr10	37322410	.	AAC	A	669.82	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=9.738;DP=607;FS=6.717;HRun=0;HaplotypeScore=81.2025;InbreedingCoeff=0.9495;MQ=55.49;MQ0=16;MQRankSum=-8.329;QD=9.71;ReadPosRankSum=-0.011;VQSLOD=2.6685;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:71.99:0,72,1335	0/0:10,0:10:30.10:0,30,539	0/0:29,0:12:36.03:0,36,538	0/0:46,0:18:4.75:0,5,385	1/1:26,3:29:37.43:289,37,0	0/0:20,0:18:51.11:0,51,876	0/0:28,0:28:78.25:0,78,1349	0/0:27,0:26:75.21:0,75,1194	1/1:4,2:6:11.83:122,12,0	0/0:28,0:28:84.29:0,84,1503	0/0:17,0:17:48.15:0,48,839	0/0:15,0:15:45.15:0,45,779	0/0:24,0:24:56.97:0,57,958	0/0:23,0:23:66.22:0,66,1141	0/0:18,0:17:42.14:0,42,758	1/1:9,5:14:23.78:275,24,0	1/1:18,2:18:14.73:138,15,0	0/0:19,0:19:45.68:0,46,871	0/0:22,0:19:51.15:0,51,768	0/0:17,0:17:48.16:0,48,843	0/0:21,0:20:57.19:0,57,1035	0/0:14,0:14:33.11:0,33,603	0/0:21,0:20:54.15:0,54,917	0/0:32,0:32:93.29:0,93,1569	0/0:15,0:15:42.14:0,42,783	0/0:22,0:21:62.91:0,63,978	0/0:22,0:22:63.65:0,64,1073	0/0:17,0:17:39.07:0,39,781
chr10	37322475	.	TA	T	963.20	PASS	AB=1.000;AC=8;AF=0.143;AN=56;BaseQRankSum=6.700;DP=539;FS=14.247;HRun=9;HaplotypeScore=62.4018;InbreedingCoeff=0.7472;MQ=61.92;MQ0=1;MQRankSum=1.337;QD=16.05;ReadPosRankSum=3.887;VQSLOD=2.4283;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:78.23:0,78,898	0/0:5,0:5:12.04:0,12,138	0/0:12,0:9:24.02:0,24,253	0/1:7,0:7:3.13:3,0,101	0/0:28,0:28:57.12:0,57,634	0/0:12,0:12:24.07:0,24,280	0/0:24,0:24:63.15:0,63,699	0/0:34,0:34:90.23:0,90,1008	0/0:15,0:15:27.08:0,27,311	0/0:29,0:29:75.22:0,75,866	0/0:14,0:14:33.10:0,33,381	1/1:0,18:18:39.02:357,39,0	0/0:19,0:19:42.12:0,42,485	0/0:28,0:28:69.18:0,69,776	0/0:21,0:21:48.13:0,48,545	0/0:15,0:15:18.05:0,18,207	0/0:25,0:24:57.15:0,57,647	0/0:17,0:17:51.14:0,51,578	0/0:24,0:24:57.16:0,57,650	0/0:13,0:13:33.10:0,33,381	0/0:14,0:14:32.96:0,33,381	0/1:6,0:6:9.65:10,0,123	1/1:0,7:7:21.01:192,21,0	1/1:1,21:22:60.03:549,60,0	0/0:24,0:24:57.17:0,57,658	0/0:34,0:34:96.27:0,96,1097	0/0:27,1:28:27.35:0,27,554	0/0:13,0:13:39.12:0,39,450
chr10	37322757	.	TAA	T	1628.67	PASS	AB=0.715;AC=25;AF=0.446;AN=56;BaseQRankSum=-1.855;DP=510;FS=10.965;HRun=16;HaplotypeScore=85.4782;InbreedingCoeff=0.5008;MQ=72.14;MQ0=10;MQRankSum=0.933;QD=6.01;ReadPosRankSum=2.952;VQSLOD=-0.6968;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:20:49.19:0,49,525	1/1:1,8:9:20.97:176,21,0	0/0:58,0:22:10.85:0,11,130	0/1:50,1:23:12.74:13,0,90	0/1:9,1:25:5.12:5,0,148	0/0:20,0:23:53.69:0,54,520	0/0:9,0:7:12.01:0,12,140	1/1:10,14:24:12.34:243,12,0	0/1:9,0:13:1.21:1,0,95	0/0:20,0:22:42.48:0,42,451	0/0:17,0:17:32.08:0,32,325	0/1:1,1:6:12.55:13,0,21	1/1:1,4:5:8.99:75,9,0	1/1:3,7:10:20.50:160,20,0	0/0:11,0:11:31.88:0,32,366	0/0:2,0:8:14.23:0,14,50	0/0:5,0:27:47.65:0,48,170	0/0:23,1:26:34.02:0,34,573	0/1:11,7:17:15.53:151,0,16	1/1:3,7:10:17.83:150,18,0	1/1:3,5:8:10.88:98,11,0	1/1:1,4:6:11.70:87,12,0	0/0:4,0:10:14.54:0,15,53	0/0:3,0:4:8.37:0,8,69	1/1:5,9:15:20.40:182,20,0	0/1:10,2:21:17.71:18,0,136	1/1:5,21:28:47.29:428,47,0	0/1:11,2:19:28.70:29,0,76
chr10	37323412	.	G	GAAGAAAGAAAGA	7513.62	PASS	AB=0.659;AC=36;AF=0.692;AN=52;BaseQRankSum=-10.048;DP=603;FS=0.586;HRun=0;HaplotypeScore=173.6256;InbreedingCoeff=0.5301;MQ=64.64;MQ0=1;MQRankSum=-3.393;QD=17.12;ReadPosRankSum=-3.447;VQSLOD=2.7812;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:19,4:29:3.01:129,3,0	0/0:4,0:10:7.35:0,7,112	./.	./.	1/1:25,0:25:46.69:945,47,0	1/1:11,4:19:3.01:173,3,0	1/1:11,0:11:12.03:215,12,0	1/1:23,0:23:5.96:44,6,0	1/1:13,9:24:15.05:860,15,0	1/1:12,10:27:45.13:1476,45,0	1/1:6,6:18:15.01:345,15,0	0/0:12,0:24:15.05:0,15,419	0/1:10,0:17:7.53:13,0,8	0/0:12,0:28:10.88:0,11,25	1/1:8,7:20:11.87:533,12,0	1/1:12,8:27:3.01:173,3,0	1/1:11,0:24:7.06:426,7,0	1/1:21,4:29:11.83:266,12,0	1/1:11,0:23:3.12:84,3,0	1/1:9,0:27:1.39:62,1,0	0/0:5,0:8:1.55:0,2,4	1/1:12,0:20:8.24:74,8,0	0/0:6,0:21:28.16:0,28,802	0/0:11,0:18:3.01:0,3,84	0/1:14,0:38:15.21:20,0,15	1/1:9,9:24:45.12:1435,45,0	0/0:9,0:21:7.47:0,7,17	1/1:13,0:13:17.86:240,18,0
chr10	37324610	.	TAGAG	T	3086.87	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=10.425;DP=629;FS=6.602;HRun=0;HaplotypeScore=102.2468;InbreedingCoeff=0.9887;MQ=84.71;MQ0=0;MQRankSum=-2.564;QD=38.11;ReadPosRankSum=3.375;VQSLOD=3.5689;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,129,3425	0/0:7,0:7:21.07:0,21,560	0/0:21,0:21:57.12:0,57,1336	0/0:26,0:26:58.47:0,58,1698	1/1:1,10:11:21.07:345,21,0	0/0:27,0:27:81.26:0,81,2105	0/0:28,0:28:75.26:0,75,2001	0/0:26,0:26:72.24:0,72,1841	1/1:0,30:30:66.16:1222,66,0	0/0:25,0:25:75.26:0,75,1972	0/0:11,0:11:26.78:0,27,685	0/0:28,0:28:84.29:0,84,2234	0/0:23,0:23:69.24:0,69,1804	0/0:23,0:23:60.18:0,60,1446	0/0:32,0:32:93.32:0,93,2420	1/1:2,17:19:42.14:783,42,0	1/1:0,21:21:48.16:896,48,0	0/0:29,0:29:75.26:0,75,1958	0/0:15,0:15:45.15:0,45,1094	0/0:14,0:14:39.13:0,39,1039	0/0:56,0:56:99:0,166,4218	0/0:15,0:15:36.12:0,36,945	0/0:10,0:10:30.10:0,30,769	0/0:28,0:28:75.26:0,75,1964	0/0:16,0:16:48.16:0,48,1280	0/0:23,0:23:60.21:0,60,1602	0/0:17,0:17:51.18:0,51,1346	0/0:4,0:4:12.04:0,12,320
chr10	37325611	.	GA	G	7732.03	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=14.206;DP=551;FS=2.780;HRun=5;HaplotypeScore=53.9062;InbreedingCoeff=0.9693;MQ=61.63;MQ0=0;MQRankSum=0.147;QD=28.53;ReadPosRankSum=1.001;VQSLOD=5.0469;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,105,1436	1/1:1,5:6:15.04:170,15,0	0/0:11,0:11:7.60:0,8,339	0/0:8,0:7:13.29:0,13,167	0/0:22,0:22:63.21:0,63,861	0/0:21,0:21:54.18:0,54,738	0/0:17,0:17:45.13:0,45,598	1/1:3,38:40:99:1282,114,0	0/0:19,0:19:54.18:0,54,739	0/0:23,0:23:69.22:0,69,929	0/0:28,0:28:84.26:0,84,1118	1/1:0,14:14:36.10:408,36,0	1/1:0,15:15:42.12:475,42,0	1/1:3,18:21:45.13:510,45,0	0/0:22,0:22:66.21:0,66,887	0/0:16,0:16:39.13:0,39,527	0/0:24,0:24:69.23:0,69,943	0/0:32,0:32:90.30:0,90,1231	1/1:0,25:25:72.19:803,72,0	1/1:5,20:25:51.14:579,51,0	1/1:1,13:14:36.10:408,36,0	1/1:1,8:9:24.07:272,24,0	1/1:1,18:19:51.15:579,51,0	1/1:4,17:21:36.10:408,36,0	1/1:0,19:19:45.13:511,45,0	1/1:2,20:22:60.17:680,60,0	1/1:0,18:18:51.15:578,51,0	1/1:0,2:2:6.02:68,6,0
chr10	37325729	.	GT	G	13634.68	PASS	AB=0.920;AC=54;AF=0.964;AN=56;BaseQRankSum=-5.490;DP=534;FS=6.566;HRun=4;HaplotypeScore=95.3985;InbreedingCoeff=0.0809;MQ=76.82;MQ0=0;MQRankSum=-5.613;QD=25.53;ReadPosRankSum=4.514;VQSLOD=3.5223;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,24:26:60.16:659,60,0	1/1:1,3:4:6.49:66,6,0	0/1:11,1:12:7.68:8,0,119	0/1:10,1:11:16.38:16,0,77	1/1:2,19:21:54.15:593,54,0	1/1:2,18:21:57.15:626,57,0	1/1:1,27:28:66.18:725,66,0	1/1:6,25:31:72.18:781,72,0	1/1:17,0:17:3.01:31,3,0	1/1:1,19:20:57.15:626,57,0	1/1:0,17:17:42.11:461,42,0	1/1:1,21:22:54.15:593,54,0	1/1:0,19:19:57.15:626,57,0	1/1:2,22:24:54.15:593,54,0	1/1:1,11:12:30.08:329,30,0	1/1:3,15:18:42.11:461,42,0	1/1:1,27:28:75.20:824,75,0	1/1:1,26:27:69.19:758,69,0	1/1:3,17:20:51.14:560,51,0	1/1:1,11:12:33.01:346,33,0	1/1:0,19:19:54.15:593,54,0	1/1:1,21:22:57.15:626,57,0	1/1:1,11:12:30.08:329,30,0	1/1:0,19:19:45.12:494,45,0	1/1:2,18:20:51.14:560,51,0	1/1:3,18:21:54.14:593,54,0	1/1:1,20:21:48.13:527,48,0	1/1:1,9:10:21.06:231,21,0
chr10	37325733	.	TA	T	13613.58	PASS	AB=1.000;AC=54;AF=0.964;AN=56;BaseQRankSum=-5.507;DP=527;FS=12.070;HRun=4;HaplotypeScore=96.5831;InbreedingCoeff=0.1096;MQ=75.24;MQ0=0;MQRankSum=-4.615;QD=25.83;ReadPosRankSum=4.423;VQSLOD=3.3568;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:28:60.16:659,60,0	1/1:3,0:3:6.49:66,6,0	0/1:9,0:9:10.57:11,0,137	0/1:9,0:10:8.16:8,0,93	1/1:21,0:21:54.15:593,54,0	1/1:23,0:23:57.15:626,57,0	1/1:27,0:27:66.18:725,66,0	1/1:29,0:29:72.18:781,72,0	1/1:1,15:16:3.01:34,3,0	1/1:20,0:20:57.15:626,57,0	1/1:19,0:19:42.11:461,42,0	1/1:22,0:22:54.04:593,54,0	1/1:19,0:19:57.15:626,57,0	1/1:24,0:24:54.15:593,54,0	1/1:14,0:14:14.13:311,14,0	1/1:15,0:15:42.11:461,42,0	1/1:30,0:30:75.20:824,75,0	1/1:27,0:27:69.19:758,69,0	1/1:21,0:21:51.14:560,51,0	1/1:12,0:12:33.01:346,33,0	1/1:19,0:19:54.15:593,54,0	1/1:22,0:22:57.15:626,57,0	1/1:11,0:11:30.08:329,30,0	1/1:19,0:19:45.12:494,45,0	1/1:18,0:18:51.14:560,51,0	1/1:19,0:19:54.15:593,54,0	1/1:20,0:20:48.13:527,48,0	1/1:10,0:10:21.06:231,21,0
chr10	37326140	.	AAC	A	534.55	PASS	AC=8;AF=0.148;AN=54;BaseQRankSum=3.218;DP=642;FS=17.838;HRun=0;HaplotypeScore=102.8773;InbreedingCoeff=0.5320;MQ=56.54;MQ0=37;MQRankSum=4.325;QD=5.94;ReadPosRankSum=2.259;VQSLOD=2.0569;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:33:2.80:0,3,26	0/0:13,0:12:2.97:0,3,20	0/0:74,0:19:0:0,0,0	0/0:64,0:19:0.47:0,0,1	1/1:12,7:19:12.03:131,12,0	0/0:17,0:17:2.99:0,3,24	0/0:33,0:32:9:0,9,91	0/0:27,0:25:24.94:0,25,174	1/1:12,6:19:11.87:112,12,0	0/0:13,0:12:8.85:0,9,56	0/0:9,0:9:2.99:0,3,23	0/0:19,0:18:11.99:0,12,110	0/0:12,0:12:3:0,3,27	0/0:14,0:14:9:0,9,93	0/0:18,0:20:6.01:0,6,62	1/1:8,1:12:5.85:47,6,0	1/1:24,11:39:41.44:382,41,0	0/0:26,0:25:31.24:0,31,283	0/0:17,0:17:6.57:0,7,30	./.	0/0:26,0:24:9:0,9,108	0/0:17,0:17:9.02:0,9,110	0/0:12,0:12:3:0,3,26	0/0:34,0:34:8.99:0,9,87	0/0:15,0:16:3:0,3,26	0/0:23,0:22:33.95:0,34,324	0/0:18,0:18:13.23:0,13,120	0/0:7,0:6:5.94:0,6,44
chr10	37327146	.	AGAAGGAAGGGAAGGAG	A	5614.78	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=11.233;DP=777;FS=14.371;HRun=0;HaplotypeScore=319.8820;InbreedingCoeff=0.9995;MQ=71.95;MQ0=1;MQRankSum=-9.019;QD=56.15;ReadPosRankSum=1.022;VQSLOD=2.8854;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,144,7804	0/0:9,0:9:27.08:0,27,1829	0/0:28,0:24:54.13:0,54,2098	0/0:38,0:30:80.32:0,80,2852	1/1:0,21:21:45.77:1168,46,0	0/0:24,0:24:69.24:0,69,4979	0/0:30,0:30:81.21:0,81,4488	0/0:30,0:30:78.23:0,78,4255	1/1:2,21:23:36.12:1667,36,0	0/0:30,0:30:86.88:0,87,5877	0/0:25,0:25:69.22:0,69,4731	0/0:31,0:31:90.27:0,90,5706	0/0:36,0:36:99:0,102,7104	0/0:33,0:33:90.17:0,90,6085	0/0:31,0:30:87.23:0,87,5009	1/1:0,28:28:35.99:1667,36,0	1/1:1,27:28:30.02:1112,30,0	0/0:14,0:14:39.10:0,39,2597	0/0:25,0:25:71.23:0,71,3701	0/0:23,0:23:69.20:0,69,4554	0/0:44,0:44:99:0,126,8488	0/0:26,0:26:72.16:0,72,4619	0/0:23,0:23:69.22:0,69,4638	0/0:32,0:32:90.31:0,90,6579	0/0:15,0:15:45.13:0,45,3096	0/0:28,0:28:84.25:0,84,4866	0/0:39,0:39:99:0,111,7717	0/0:14,0:14:42.14:0,42,2960
chr10	37330756	.	TTCCCTGCCATGTTCA	T	24010.47	PASS	AB=0.593;AC=37;AF=0.661;AN=56;BaseQRankSum=16.717;DP=555;FS=12.866;HRun=0;HaplotypeScore=253.1882;InbreedingCoeff=0.8834;MQ=91.48;MQ0=1;MQRankSum=-16.212;QD=79.50;ReadPosRankSum=6.659;VQSLOD=3.1776;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,129,7998	1/1:2,7:9:21.07:901,21,0	0/0:28,0:28:75.26:0,75,4439	0/0:27,0:27:75.26:0,75,4379	1/1:1,13:14:27.01:964,27,0	0/0:19,0:19:51.18:0,51,3563	0/0:34,0:34:96.31:0,96,6297	1/1:7,12:19:36.11:1197,36,0	1/1:5,23:28:60.21:2559,60,0	0/0:23,0:23:66.18:0,66,4134	0/0:14,0:14:39.13:0,39,2693	1/1:3,26:29:69.24:3018,69,0	1/1:4,15:19:42.14:1848,42,0	1/1:4,12:16:33.11:1413,33,0	0/0:36,0:36:99:0,99,6487	1/1:3,11:14:33.11:1433,33,0	1/1:4,10:14:21.07:924,21,0	0/0:24,0:23:60.18:0,60,3976	1/1:2,4:6:12.04:528,12,0	1/1:4,15:19:33.11:1385,33,0	1/1:10,7:17:15.05:636,15,0	1/1:5,11:16:24.08:978,24,0	1/1:2,12:14:30.10:1157,30,0	1/1:1,7:8:15:601,15,0	1/1:5,9:14:24.08:1032,24,0	0/1:5,11:16:99:1060,0,648	1/1:2,20:22:51.18:2245,51,0	1/1:4,4:8:3.01:132,3,0
chr10	37330794	.	C	CTCATTCAT	13367.68	PASS	AC=36;AF=0.720;AN=50;BaseQRankSum=2.610;DP=774;FS=0.989;HRun=0;HaplotypeScore=312.4605;InbreedingCoeff=0.9668;MQ=64.96;MQ0=6;MQRankSum=-8.900;QD=26.63;ReadPosRankSum=-7.536;VQSLOD=2.1209;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:47:54.19:0,54,1315	1/1:8,5:13:15.05:609,15,0	./.	./.	1/1:40,0:40:46.36:892,46,0	0/0:16,0:16:18.04:0,18,345	0/0:31,0:31:35.48:0,35,743	1/1:35,0:35:24.37:306,24,0	1/1:35,0:36:36.06:817,36,0	0/0:33,0:32:45.15:0,45,1003	0/0:23,0:23:30.10:0,30,713	1/1:33,0:36:27.09:853,27,0	1/1:28,8:36:60.20:1547,60,0	1/1:17,10:27:36.12:1082,36,0	0/0:37,0:37:51.15:0,51,1183	1/1:23,0:24:27.09:886,27,0	1/1:23,0:23:25.76:608,26,0	1/1:15,0:29:26.94:219,27,0	1/1:16,1:17:12.02:215,12,0	1/1:19,13:37:52.33:1248,52,0	1/1:24,1:25:17.62:279,18,0	1/1:20,3:23:27.09:685,27,0	1/1:25,0:25:17.48:187,17,0	1/1:10,0:10:6.49:202,6,0	1/1:25,3:31:45.13:1271,45,0	0/0:29,0:29:43.45:0,43,1196	1/1:30,4:34:51.17:1463,51,0	./.
chr10	37331435	.	CAACACA	C	154.04	PASS	AB=0.956;AC=9;AF=0.161;AN=56;BaseQRankSum=6.733;DP=521;FS=11.831;HRun=0;HaplotypeScore=139.7483;InbreedingCoeff=-0.1921;MQ=58.93;MQ0=15;MQRankSum=-2.413;QD=0.90;ReadPosRankSum=4.336;VQSLOD=1.4417;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:91.61:0,92,1733	0/1:6,6:11:4.98:5,0,90	0/0:12,0:7:18.43:0,18,164	0/0:18,0:6:12.01:0,12,117	0/0:16,0:16:30.22:0,30,239	0/0:17,0:17:47.96:0,48,739	0/0:28,0:27:75.47:0,75,1411	0/0:25,0:24:34.26:0,34,521	0/1:19,0:20:36.08:36,0,209	0/0:21,0:20:59.95:0,60,1095	0/0:15,0:15:38.94:0,39,739	0/1:25,0:25:54.14:54,0,189	0/0:19,0:19:7.59:0,8,292	0/1:19,0:18:92.66:93,0,127	0/0:23,0:23:64.38:0,64,1211	0/0:21,0:21:10.58:0,11,405	0/1:15,0:14:23.90:24,0,146	0/0:10,0:9:27.03:0,27,337	0/1:14,0:14:20.88:21,0,227	0/0:15,0:15:20.93:0,21,291	0/0:26,0:25:25.23:0,25,380	0/1:14,0:14:11.68:12,0,210	0/0:11,0:10:22.84:0,23,187	0/1:36,0:36:20.48:20,0,280	0/1:15,0:14:25.76:26,0,121	0/0:11,0:10:30.07:0,30,715	0/0:20,0:17:38.35:0,38,486	0/0:10,0:8:14.98:0,15,248
chr10	37331436	.	AACACACACACACAC	A	799.32	PASS	AB=0.606;AC=5;AF=0.089;AN=56;BaseQRankSum=3.086;DP=532;FS=1.356;HRun=0;HaplotypeScore=211.8895;InbreedingCoeff=0.5647;MQ=57.28;MQ0=19;MQRankSum=-3.626;QD=14.27;ReadPosRankSum=-1.200;VQSLOD=2.5581;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:66.23:0,66,3087	0/0:13,0:11:2.49:0,2,31	0/0:11,0:6:0.89:0,1,2	0/0:18,0:6:3.01:0,3,79	0/0:9,5:16:0.19:0,0,1	0/0:17,0:17:27.08:0,27,1167	0/0:28,0:27:48.61:0,49,2282	0/0:24,0:23:24.07:0,24,510	0/1:7,11:20:11.94:332,0,12	0/0:21,0:20:33.10:0,33,1685	0/0:16,0:16:30.09:0,30,1305	0/0:25,0:25:51.56:0,52,1297	0/0:19,0:19:33.08:0,33,857	0/0:18,0:18:7.28:0,7,524	0/0:24,0:24:48.13:0,48,2168	1/1:17,2:21:12.50:303,12,0	1/1:10,5:14:9.03:282,9,0	0/0:11,0:9:15.05:0,15,559	0/0:14,0:14:18.05:0,18,378	0/0:6,0:15:12.04:0,12,264	0/0:26,0:25:24.04:0,24,569	0/0:14,0:14:27.09:0,27,748	0/0:11,0:10:12.02:0,12,216	0/0:35,0:36:53.78:0,54,1281	0/0:15,0:14:27.09:0,27,649	0/0:18,0:16:39.09:0,39,1868	0/0:20,0:17:30.10:0,30,1101	0/0:13,0:9:9:0,9,343
chr10	37331475	.	ACTCTCTCTCTCT	A	494.63	PASS	AB=0.902;AC=11;AF=0.250;AN=44;BaseQRankSum=2.298;DP=609;FS=1.344;HRun=0;HaplotypeScore=193.0521;InbreedingCoeff=0.1724;MQ=40.59;MQ0=84;MQRankSum=0.463;QD=2.78;ReadPosRankSum=-0.398;VQSLOD=2.6787;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:30:27.28:0,27,614	0/0:16,0:11:1.14:0,1,2	./.	./.	0/0:19,0:18:3.01:0,3,115	0/0:20,0:18:3.48:0,3,112	0/0:44,0:39:0.96:0,1,2	./.	0/0:28,0:25:18.06:0,18,381	0/0:19,0:14:6.02:0,6,220	0/0:17,0:16:9.03:0,9,235	0/1:21,0:22:0:0,0,0	0/1:17,0:15:26.76:59,0,27	0/1:21,1:25:26.04:26,0,147	0/0:32,0:25:12.50:0,12,331	1/1:9,3:13:2.03:65,2,0	0/0:12,0:10:9.03:0,9,215	0/0:8,0:6:6.02:0,6,187	0/1:21,0:24:18.91:192,0,19	1/1:17,0:15:2.80:70,3,0	0/0:37,0:23:2.51:0,3,8	0/0:18,6:23:0.47:0,0,1	./.	0/0:36,0:31:1.23:0,1,3	0/1:28,0:22:19.44:103,0,19	./.	1/1:20,0:19:5.26:96,5,0	./.
chr10	37331948	.	T	TA	1366.74	PASS	AB=0.740;AC=17;AF=0.304;AN=56;BaseQRankSum=-4.144;DP=663;FS=0.000;HRun=16;HaplotypeScore=99.2681;InbreedingCoeff=0.1199;MQ=84.52;MQ0=6;MQRankSum=-0.982;QD=4.86;ReadPosRankSum=-4.532;VQSLOD=0.5324;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:56:51.33:0,51,155	0/1:7,0:7:7.93:29,0,8	0/0:42,0:25:15.62:0,16,84	0/0:45,0:30:16.29:0,16,83	0/0:20,4:25:5.29:0,5,123	0/0:4,0:14:23.23:0,23,74	0/0:9,0:20:23.19:0,23,74	0/1:19,10:32:46.46:188,0,46	0/0:17,0:18:33.94:0,34,189	0/0:9,0:15:15.08:0,15,51	0/0:4,0:12:20.53:0,21,77	0/1:14,1:15:18.29:45,0,18	0/1:12,10:24:34.39:115,0,34	0/1:8,9:17:18.56:121,0,19	0/0:10,0:31:36.30:0,36,103	0/0:20,2:24:6.64:0,7,188	0/0:27,0:33:66.14:0,66,338	0/0:10,0:21:27.62:0,28,96	1/1:12,13:27:21.35:246,21,0	0/1:9,11:20:9.63:114,0,10	0/1:6,14:20:21.55:36,0,22	0/1:12,4:16:54.32:64,0,54	0/1:12,1:13:5.13:41,0,5	0/1:4,17:22:0.60:182,0,1	0/0:22,2:24:6.79:0,7,128	1/1:13,1:29:45.04:233,45,0	0/1:9,12:22:30.09:93,0,30	1/1:11,0:14:6.57:30,7,0
chr10	37332119	.	CT	C	177.83	PASS	AB=0.675;AC=3;AF=0.054;AN=56;BaseQRankSum=6.764;DP=536;FS=0.000;HRun=1;HaplotypeScore=98.3039;InbreedingCoeff=-0.0450;MQ=51.68;MQ0=29;MQRankSum=-0.013;QD=3.78;ReadPosRankSum=5.666;VQSLOD=0.2053;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:19:15.03:0,15,201	0/0:9,0:8:12.03:0,12,147	0/0:22,0:7:18.05:0,18,202	0/0:45,0:8:12.02:0,12,136	0/0:7,1:8:14.15:0,14,73	0/0:18,0:18:33.08:0,33,420	0/0:20,0:19:27.49:0,27,324	0/0:34,0:30:90.14:0,90,1186	0/1:8,7:13:14.94:98,0,15	0/0:15,0:15:36.12:0,36,478	0/0:11,0:11:15.05:0,15,189	0/0:16,0:16:21.07:0,21,296	0/0:14,0:12:17.90:0,18,220	0/0:11,0:11:27.06:0,27,376	0/0:24,0:22:35.83:0,36,497	0/1:9,6:14:46.89:65,0,47	0/1:7,10:17:38.74:114,0,39	0/0:14,0:14:15.03:0,15,186	0/0:30,0:27:72.06:0,72,952	0/0:17,0:14:24.07:0,24,313	0/0:40,0:35:60.63:0,61,840	0/0:17,0:17:30.08:0,30,421	0/0:17,0:16:24.08:0,24,305	0/0:20,0:19:26.65:0,27,342	0/0:12,0:10:12.04:0,12,172	0/0:24,0:23:66.22:0,66,939	0/0:14,0:14:26.87:0,27,359	0/0:14,0:14:30.07:0,30,377
chr10	37332121	.	CT	C	153.05	PASS	AB=0.670;AC=3;AF=0.054;AN=56;BaseQRankSum=7.187;DP=538;FS=0.000;HRun=1;HaplotypeScore=99.0918;InbreedingCoeff=-0.0600;MQ=47.65;MQ0=32;MQRankSum=-1.012;QD=3.33;ReadPosRankSum=6.015;VQSLOD=-0.1191;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:18:12.02:0,12,164	0/0:8,0:7:9.02:0,9,109	0/0:20,0:5:12.03:0,12,142	0/0:44,0:7:11.98:0,12,131	0/0:7,1:8:14.59:0,15,86	0/0:20,0:20:32.77:0,33,429	0/0:21,0:20:27.49:0,27,324	0/0:36,0:30:90.04:0,90,1162	0/1:8,7:13:19.17:98,0,19	0/0:14,0:14:33.11:0,33,441	0/0:11,0:11:15.05:0,15,191	0/0:17,0:17:21.07:0,21,296	0/0:14,0:12:17.90:0,18,220	0/0:11,0:11:27.06:0,27,375	0/0:24,0:22:35.83:0,36,497	0/1:8,6:13:40.98:41,0,65	0/1:7,10:17:51.29:114,0,51	0/0:13,0:13:12.04:0,12,162	0/0:31,0:27:69.08:0,69,919	0/0:17,0:14:21.04:0,21,274	0/0:40,0:35:57.63:0,58,802	0/0:18,0:18:30.09:0,30,421	0/0:17,0:16:24.04:0,24,277	0/0:20,0:19:26.61:0,27,323	0/0:12,0:10:12.04:0,12,172	0/0:26,0:25:66.22:0,66,939	0/0:15,0:14:26.87:0,27,358	0/0:13,0:13:27.08:0,27,351
chr10	37332156	.	CCT	C	345.90	PASS	AB=0.938;AC=9;AF=0.180;AN=50;BaseQRankSum=-2.160;DP=454;FS=12.375;HRun=0;HaplotypeScore=84.5449;InbreedingCoeff=-0.1742;MQ=34.03;MQ0=78;MQRankSum=2.865;QD=2.12;ReadPosRankSum=-0.309;VQSLOD=0.9136;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,8:22:9.45:0,9,117	0/0:7,0:4:11.36:0,11,84	./.	./.	./.	0/1:18,1:16:83.90:122,0,84	0/0:18,0:13:14.94:0,15,195	0/1:29,4:17:99:125,0,232	0/0:15,0:13:3.46:0,3,50	0/1:13,7:16:81.90:82,0,99	0/0:8,1:7:3.01:0,3,47	0/0:12,0:10:5.98:0,6,48	0/0:14,0:9:17.20:0,17,181	0/1:9,1:10:26.92:27,0,164	0/0:23,0:21:14.78:0,15,144	0/0:18,0:13:2.59:0,3,10	0/0:23,0:22:14.50:0,15,155	0/0:14,0:12:5.96:0,6,49	0/0:27,0:15:23.65:0,24,280	0/0:10,0:5:2.04:0,2,6	0/0:36,0:29:20.91:0,21,215	0/0:8,0:6:3.01:0,3,47	0/0:16,0:14:2.12:0,2,12	0/1:21,0:18:3.30:3,0,64	0/1:13,0:8:4.56:5,0,21	0/1:22,0:17:53.23:53,0,248	0/1:19,1:17:17.11:17,0,46	0/1:5,0:3:1.67:34,0,2
chr10	37332158	.	TCTCTCTCC	T	54.93	PASS	AB=0.917;AC=10;AF=0.208;AN=48;BaseQRankSum=1.466;DP=457;FS=5.151;HRun=0;HaplotypeScore=105.2122;InbreedingCoeff=0.3117;MQ=34.46;MQ0=81;MQRankSum=-2.977;QD=0.43;ReadPosRankSum=2.522;VQSLOD=1.4744;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:22:0.47:0,0,1	0/0:9,0:6:12.03:0,12,182	./.	./.	./.	0/0:17,0:14:2.88:0,3,16	0/0:20,0:14:3.01:0,3,40	0/0:31,0:15:0.89:0,1,2	1/1:14,0:12:10.81:50,11,0	0/1:21,0:16:13.24:13,0,43	0/0:9,0:7:0.47:0,0,1	1/1:12,0:10:2.08:9,2,0	0/0:14,0:9:3:0,3,25	0/0:10,0:10:0.47:0,0,1	0/1:24,0:22:2.59:3,0,21	1/1:18,0:13:13.98:64,14,0	0/1:22,0:21:29.20:34,0,29	0/0:15,0:13:6.02:0,6,70	./.	0/0:12,0:6:9.50:0,10,125	0/0:36,0:29:18.02:0,18,246	0/0:7,0:5:0.47:0,0,1	0/1:8,8:14:0.11:0,0,0	0/0:20,0:17:3.48:0,3,53	0/0:13,0:8:9.03:0,9,119	0/0:23,0:18:19.61:0,20,371	0/0:22,0:19:9.08:0,9,70	0/0:5,0:3:3.48:0,3,60
chr10	37332174	.	C	CCT	988.87	PASS	AB=0.816;AC=9;AF=0.161;AN=56;BaseQRankSum=5.119;DP=456;FS=11.545;HRun=0;HaplotypeScore=68.2926;InbreedingCoeff=0.2146;MQ=42.94;MQ0=68;MQRankSum=-5.751;QD=6.96;ReadPosRankSum=0.343;VQSLOD=2.0946;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:37,1:29:1.93:2,0,310	0/0:10,0:7:11.58:0,12,193	0/0:7,0:4:2.97:0,3,20	0/0:11,0:5:5.22:0,5,87	1/1:5,4:6:3.01:38,3,0	0/0:16,0:14:22.20:0,22,275	0/0:17,1:14:15.48:0,15,215	0/0:27,0:17:31.24:0,31,349	0/1:3,12:13:5.85:192,0,6	0/0:22,0:17:21.07:0,21,276	0/0:10,0:8:7.27:0,7,116	0/0:14,0:12:3.62:0,4,47	0/0:11,0:8:9.97:0,10,105	0/0:12,0:12:15.10:0,15,164	0/1:23,1:22:12.61:13,0,132	1/1:4,11:12:21.07:347,21,0	0/1:7,16:21:12.63:511,0,13	0/0:10,0:8:12:0,12,139	0/0:21,0:11:16.60:0,17,189	0/0:14,0:9:21.07:0,21,279	0/0:32,0:27:34.29:0,34,424	0/0:10,0:8:10.17:0,10,154	0/0:14,0:13:1.35:0,1,37	0/1:18,0:15:20.91:21,0,34	0/0:13,0:9:13.27:0,13,180	0/0:22,0:17:48.09:0,48,588	0/0:16,0:14:17.72:0,18,215	0/0:4,0:3:6.02:0,6,80
chr10	37334184	.	GTGCCACATTTATTACTGCTGGGGTCATATGCACA	G	5678.77	PASS	AB=0.616;AC=28;AF=0.500;AN=56;BaseQRankSum=3.383;DP=496;FS=8.650;HRun=0;HaplotypeScore=404.2956;InbreedingCoeff=0.8110;MQ=73.10;MQ0=2;MQRankSum=2.487;QD=24.16;ReadPosRankSum=0.982;VQSLOD=1.8293;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:84.23:0,84,2518	1/1:3,0:3:6.02:94,6,0	0/0:14,0:11:1.40:0,1,70	0/0:15,0:14:8.93:0,9,88	0/0:13,0:13:30.10:0,30,894	0/0:24,0:24:57.18:0,57,1259	0/0:19,0:19:27.08:0,27,499	1/1:17,10:27:23.92:246,24,0	0/0:16,0:16:33.10:0,33,1496	0/0:22,0:22:52.42:0,52,1282	0/0:15,0:15:24.07:0,24,1032	1/1:11,0:11:15.05:289,15,0	1/1:11,0:10:24.05:356,24,0	1/1:19,0:18:42.14:796,42,0	0/0:25,0:25:45.15:0,45,862	0/0:20,0:20:33.11:0,33,1114	0/0:26,0:26:57.19:0,57,1756	0/0:10,0:10:18.06:0,18,611	1/1:6,7:12:20.98:277,21,0	1/1:8,19:25:42.13:544,42,0	1/1:34,0:33:60.11:962,60,0	1/1:5,8:13:6.02:83,6,0	0/1:4,8:12:0:0,0,0	1/1:19,0:19:30.10:567,30,0	1/1:10,0:10:18.06:336,18,0	0/1:10,14:23:12.93:583,0,13	1/1:11,0:11:24.07:478,24,0	1/1:1,0:1:3.01:68,3,0
chr10	37334334	.	TTTATTTA	T	756.93	PASS	AB=0.814;AC=10;AF=0.192;AN=52;BaseQRankSum=8.807;DP=256;FS=0.000;HRun=0;HaplotypeScore=80.7923;InbreedingCoeff=-0.0447;MQ=48.84;MQ0=16;MQRankSum=-0.448;QD=8.50;ReadPosRankSum=3.704;VQSLOD=0.9082;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:44.64:0,45,1020	0/0:4,0:4:8.65:0,9,48	./.	./.	0/1:4,0:4:6.47:6,0,13	0/0:16,0:16:44.87:0,45,1100	0/0:1,0:1:2.98:0,3,22	0/1:23,0:21:3.58:4,0,250	0/0:6,0:6:5.36:0,5,84	0/0:6,0:6:14.60:0,15,210	0/0:7,0:7:17.53:0,18,249	0/0:11,0:11:12.02:0,12,296	0/1:2,4:6:18.80:190,0,19	1/1:2,3:5:12.04:208,12,0	0/0:6,0:6:17.72:0,18,349	0/0:5,0:5:7.48:0,7,50	0/0:26,0:24:7.61:0,8,223	0/1:11,2:12:54.80:55,0,139	0/1:14,1:13:76.02:76,0,116	0/1:6,2:8:32.12:32,0,83	0/0:5,1:6:13.45:0,13,72	0/0:2,0:2:5.68:0,6,28	0/0:3,0:3:6.01:0,6,115	0/0:5,0:5:11.50:0,12,60	0/1:3,3:6:34.85:137,0,35	0/0:8,0:8:23.21:0,23,263	0/1:4,5:9:68.31:186,0,68	0/0:21,0:21:53.62:0,54,1194
chr10	37334336	.	TA	T	221.48	PASS	AB=0.778;AC=5;AF=0.096;AN=52;BaseQRankSum=6.974;DP=262;FS=5.079;HRun=1;HaplotypeScore=56.9754;InbreedingCoeff=-0.0603;MQ=48.85;MQ0=17;MQRankSum=-0.182;QD=4.71;ReadPosRankSum=3.265;VQSLOD=0.8813;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:44.92:0,45,556	0/0:3,0:3:8.88:0,9,59	./.	./.	0/1:1,3:4:5.35:58,0,5	0/0:17,0:17:50.89:0,51,609	0/0:1,0:1:2.92:0,3,17	0/0:22,0:20:47.63:0,48,389	0/1:4,2:6:28.65:29,0,64	0/0:5,0:5:14.81:0,15,137	0/0:8,0:8:20.77:0,21,188	0/0:11,0:11:12.02:0,12,156	0/0:7,0:7:4.41:0,4,54	0/0:6,0:6:0.98:0,1,26	0/0:6,0:6:17.90:0,18,194	0/1:4,1:5:9.45:9,0,57	0/1:16,9:23:99:228,0,127	0/0:13,0:12:28.30:0,28,220	0/0:13,0:12:25.02:0,25,189	0/0:8,0:8:19.35:0,19,145	0/1:7,0:7:2.69:3,0,68	0/0:4,0:4:11.75:0,12,71	0/0:5,0:5:8.60:0,9,76	0/0:5,0:5:11.82:0,12,75	0/0:7,0:7:9.50:0,10,77	0/0:8,0:8:23.70:0,24,184	0/0:10,0:10:9.21:0,9,104	0/0:19,0:19:53.87:0,54,617
chr10	37334338	.	TTTA	T	518.56	PASS	AB=0.917;AC=12;AF=0.231;AN=52;BaseQRankSum=8.501;DP=281;FS=0.740;HRun=0;HaplotypeScore=70.4642;InbreedingCoeff=-0.2647;MQ=48.95;MQ0=17;MQRankSum=-1.254;QD=4.47;ReadPosRankSum=4.132;VQSLOD=1.5643;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:44.90:0,45,500	0/0:3,0:3:8.65:0,9,48	./.	./.	0/1:3,3:6:9.29:81,0,9	0/0:17,0:17:45.05:0,45,492	0/0:3,0:3:3.84:0,4,24	0/0:20,0:18:47.49:0,47,332	0/1:5,2:7:44.55:45,0,50	0/0:5,0:5:11.59:0,12,87	0/0:10,0:10:20.11:0,20,158	0/0:10,0:10:6.02:0,6,88	0/1:9,0:9:30.48:76,0,30	0/1:6,0:6:14.56:59,0,15	0/0:7,0:7:11.63:0,12,108	0/1:4,1:5:17.61:18,0,41	0/1:15,9:22:97.79:225,0,98	0/1:13,0:12:0.05:0,0,140	0/1:13,0:12:17.43:17,0,127	0/1:10,0:10:1.03:1,0,95	0/0:9,0:9:12.74:0,13,70	0/0:5,0:5:11.37:0,11,56	0/1:5,0:5:5.06:5,0,62	0/0:5,0:5:11.50:0,12,60	0/1:8,0:8:46.01:50,0,46	0/0:10,0:10:23.62:0,24,154	0/1:10,0:10:68.35:75,0,68	0/0:19,0:19:47.46:0,47,514
chr10	37334753	.	AC	A	2712.32	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=7.334;DP=730;FS=4.877;HRun=3;HaplotypeScore=75.8916;InbreedingCoeff=0.9972;MQ=89.55;MQ0=1;MQRankSum=-2.144;QD=31.54;ReadPosRankSum=3.747;VQSLOD=3.9360;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,141,2089	0/0:7,0:7:21.07:0,21,313	0/0:37,0:37:99:0,99,1430	0/0:18,0:18:45.14:0,45,646	0/0:19,0:19:57.18:0,57,833	0/0:12,0:12:36.12:0,36,540	0/0:28,0:28:84.27:0,84,1236	0/0:31,0:31:93.30:0,93,1358	0/0:35,0:35:99:0,105,1572	0/0:32,0:32:93.31:0,93,1376	0/0:25,0:25:75.24:0,75,1103	1/1:1,36:37:99:1316,102,0	0/0:29,0:29:84.28:0,84,1256	0/0:27,0:27:81.26:0,81,1193	0/0:29,0:29:87.29:0,87,1303	0/0:24,0:24:72.24:0,72,1077	0/0:27,0:27:81.22:0,81,1165	0/0:34,0:33:96.30:0,96,1413	0/0:18,0:18:54.17:0,54,787	0/0:19,0:19:54.17:0,54,783	0/0:49,0:49:99:0,138,2037	0/0:10,0:10:30.10:0,30,448	1/1:1,11:12:27.04:332,27,0	1/1:1,36:37:93.30:1208,93,0	0/0:8,0:8:24.08:0,24,360	0/0:33,0:33:96.31:0,96,1416	0/0:31,0:31:93.30:0,93,1371	0/0:15,0:15:39.13:0,39,584
chr10	37335627	.	GACAC	G	1040.72	PASS	AB=0.968;AC=25;AF=0.595;AN=42;BaseQRankSum=-1.034;DP=588;FS=1.023;HRun=0;HaplotypeScore=110.5064;InbreedingCoeff=0.1204;MQ=66.65;MQ0=29;MQRankSum=1.532;QD=3.48;ReadPosRankSum=1.001;VQSLOD=2.2401;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:22:29.83:30,0,86	0/0:9,0:9:9:0,9,86	./.	./.	./.	1/1:15,0:15:5.93:51,6,0	0/1:28,0:30:99:204,0,156	./.	./.	1/1:19,7:26:17.56:238,18,0	1/1:5,0:7:0.47:1,0,0	1/1:17,0:20:3.40:18,3,0	0/0:18,0:17:7.75:0,8,47	./.	1/1:9,5:18:0.29:42,0,0	1/1:10,4:17:2.80:45,3,0	0/0:21,0:22:2.72:0,3,12	1/1:17,7:25:7.23:363,7,0	0/0:11,0:11:2.90:0,3,16	0/0:14,0:14:0.47:0,0,1	1/1:38,0:34:0.38:10,0,0	0/0:16,0:16:13.88:0,14,135	./.	1/1:34,0:33:5.95:54,6,0	0/1:16,0:16:27.66:28,0,114	0/1:11,0:10:18.93:38,0,19	0/1:8,0:8:22.99:27,0,23	1/1:7,0:7:2.98:22,3,0
chr10	37335740	.	G	GCGCACA	9247.23	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-5.828;DP=652;FS=18.635;HRun=0;HaplotypeScore=253.7855;InbreedingCoeff=0.8284;MQ=52.96;MQ0=3;MQRankSum=-10.924;QD=31.56;ReadPosRankSum=-1.698;VQSLOD=2.9059;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:84.27:0,84,1813	1/1:1,3:5:5.51:172,6,0	0/0:14,0:7:12.02:0,12,130	0/0:24,0:16:24.20:0,24,257	0/0:1,20:21:1.41:0,1,2	0/0:15,0:15:45.14:0,45,963	0/0:45,0:45:99:0,123,2575	1/1:3,14:20:57.12:1229,57,0	1/1:4,15:19:21.07:680,21,0	0/0:39,0:39:96.31:0,96,2065	0/0:13,0:13:39.12:0,39,828	0/0:25,0:24:36.40:0,36,668	1/1:6,17:27:42.10:1138,42,0	0/0:2,27:30:0.47:0,0,2	0/0:23,0:23:66.20:0,66,1399	1/1:2,25:27:11.60:414,12,0	1/1:3,11:16:27.08:867,27,0	0/0:24,0:24:60.20:0,60,1315	1/1:9,4:12:30.10:687,30,0	1/1:2,8:11:2.25:48,2,0	1/1:35,19:54:19.83:313,20,0	0/0:4,13:18:0.66:0,1,1	0/0:3,0:16:6.49:0,6,138	0/0:20,0:20:12.55:0,13,213	1/1:3,36:39:1.94:42,2,0	1/1:3,28:32:15.47:2421,15,0	1/1:7,9:20:14.98:493,15,0	1/1:1,9:10:23.91:743,24,0
chr10	37335770	.	ATG	A	179.96	PASS	AB=0.741;AC=2;AF=0.036;AN=56;BaseQRankSum=3.006;DP=760;FS=13.644;HRun=0;HaplotypeScore=246.2595;InbreedingCoeff=-0.0445;MQ=58.38;MQ0=1;MQRankSum=1.112;QD=3.21;ReadPosRankSum=-3.073;VQSLOD=0.9830;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,108,2165	0/0:6,0:6:12.02:0,12,244	0/0:25,0:17:23.43:0,23,697	0/0:37,0:28:53.16:0,53,900	0/0:19,0:19:23.41:0,23,482	0/0:23,0:23:69.22:0,69,1352	0/0:47,0:47:99:0,141,2778	0/0:17,0:16:48.16:0,48,973	0/0:28,0:28:72.25:0,72,1444	0/0:42,0:42:99:0,123,2478	0/0:15,0:15:42.14:0,42,852	0/1:21,13:34:99:213,0,405	0/0:29,0:29:84.23:0,84,1650	0/0:24,0:23:56.68:0,57,1087	0/0:37,0:37:99:0,108,2145	0/0:31,0:31:65.56:0,66,1248	0/0:21,0:21:50.84:0,51,1006	0/0:19,0:19:54.19:0,54,1079	0/0:28,0:27:78.27:0,78,1497	0/0:11,0:11:24.08:0,24,475	0/0:75,0:75:99:0,159,3143	0/0:23,0:23:54.17:0,54,1084	0/0:14,0:14:3.01:0,3,31	0/1:15,7:22:56.01:56,0,110	0/0:34,0:34:71.92:0,72,1457	0/0:33,0:33:96.33:0,96,1914	0/0:19,0:19:41.82:0,42,849	0/0:9,0:9:27.09:0,27,538
chr10	37335849	.	GCA	G	3815.97	PASS	AB=0.985;AC=24;AF=0.429;AN=56;BaseQRankSum=15.144;DP=786;FS=4.691;HRun=0;HaplotypeScore=138.4963;InbreedingCoeff=0.3339;MQ=50.90;MQ0=27;MQRankSum=0.060;QD=8.73;ReadPosRankSum=2.457;VQSLOD=3.1683;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,1:47:65.64:0,66,1458	0/1:7,0:7:14.05:32,0,14	0/0:48,0:14:18.06:0,18,286	0/0:51,0:19:30.08:0,30,445	0/0:16,0:16:42.14:0,42,651	0/0:25,0:25:51.17:0,51,794	0/1:20,2:22:21.52:22,0,672	0/1:24,0:20:79.37:130,0,79	0/0:30,0:29:39.12:0,39,582	0/0:31,0:31:69.23:0,69,1062	0/1:12,1:13:0.28:0,0,485	1/1:40,0:38:5.65:470,6,0	0/1:23,0:22:33.80:253,0,34	0/1:18,0:16:9.08:184,0,9	0/0:33,1:34:26.58:0,27,871	0/0:23,0:23:36.59:0,37,568	0/0:31,0:31:50.61:0,51,1023	0/0:12,0:12:26.53:0,27,385	0/1:26,0:24:39.02:108,0,39	1/1:21,0:20:19.33:306,19,0	1/1:96,0:96:99:841,108,0	1/1:16,0:15:19.71:199,20,0	1/1:20,0:17:5.85:171,6,0	0/1:37,0:34:0.27:274,0,0	1/1:15,0:14:4.83:161,5,0	0/1:30,0:29:99:294,0,102	1/1:15,0:15:32.80:243,33,0	0/1:12,0:12:0.71:128,0,1
chr10	37335865	.	ACACT	A	823.89	PASS	AB=0.979;AC=15;AF=0.268;AN=56;BaseQRankSum=-2.563;DP=745;FS=1.186;HRun=0;HaplotypeScore=164.1407;InbreedingCoeff=0.0119;MQ=52.31;MQ0=23;MQRankSum=1.640;QD=2.28;ReadPosRankSum=-8.371;VQSLOD=0.1822;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:84.18:0,84,1824	0/0:5,0:4:1.77:0,2,5	0/0:35,0:8:20.88:0,21,349	0/0:47,0:18:39.08:0,39,651	0/1:20,0:20:47.70:48,0,497	0/0:19,0:19:39.09:0,39,792	0/0:27,1:28:18.67:0,19,1074	1/1:27,0:23:12.28:177,12,0	0/1:22,0:21:6.83:7,0,477	0/0:29,0:29:69.22:0,69,1502	0/0:14,0:14:33.05:0,33,663	0/1:36,2:37:66.93:67,0,67	0/1:23,0:22:9.03:9,0,17	1/1:23,0:21:7.30:87,7,0	0/0:26,0:26:60.15:0,60,1266	0/1:23,0:23:79.67:80,0,494	0/0:30,0:30:23.04:0,23,982	0/0:13,0:13:27.05:0,27,566	0/1:23,0:21:6.39:152,0,6	0/0:22,0:21:3.34:0,3,25	0/1:81,2:83:52.51:100,0,53	0/1:15,1:15:24.37:86,0,24	0/1:20,0:17:4.21:56,0,4	0/0:37,0:34:16.20:0,16,79	0/0:14,0:13:9.31:0,9,24	0/1:30,1:29:73.78:74,0,155	0/0:20,0:20:6.09:0,6,19	0/1:12,1:13:30.30:40,0,30
chr10	37335867	.	ACT	A	9801.12	PASS	AB=0.911;AC=33;AF=0.589;AN=56;BaseQRankSum=6.731;DP=731;FS=3.739;HRun=0;HaplotypeScore=109.0838;InbreedingCoeff=0.6163;MQ=52.62;MQ0=22;MQRankSum=0.119;QD=20.38;ReadPosRankSum=2.761;VQSLOD=5.0496;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:96.51:0,97,1694	1/1:3,2:4:9.01:115,9,0	0/0:31,0:8:24.06:0,24,372	0/0:46,0:20:54.09:0,54,750	0/1:19,0:19:42:42,0,260	0/0:19,0:19:57.13:0,57,874	0/0:28,0:28:46.08:0,46,1014	1/1:4,22:22:30:583,30,0	0/1:22,0:21:61.51:62,0,240	0/0:29,0:29:87.26:0,87,1384	0/0:14,0:14:27.37:0,27,603	1/1:6,32:37:34.78:1019,35,0	1/1:3,18:20:13.88:560,14,0	1/1:9,14:21:35.75:445,36,0	0/0:25,0:25:56.49:0,56,1080	0/1:23,0:23:97.81:98,0,231	0/1:30,1:31:38.30:38,0,455	0/0:13,0:13:14.09:0,14,466	1/1:7,14:19:41.76:480,42,0	1/1:1,20:20:29.51:707,30,0	1/1:8,73:81:99:1927,134,0	1/1:6,10:15:37.97:497,38,0	1/1:9,10:16:36.08:478,36,0	1/1:4,33:34:24.78:661,25,0	1/1:1,13:13:27.09:407,27,0	0/1:9,22:29:40.51:855,0,41	1/1:0,20:20:33.11:501,33,0	1/1:2,11:13:22.40:327,22,0
chr10	37336344	.	GCTGCCGGATGAAGA	G	15662.31	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=16.834;DP=666;FS=15.163;HRun=0;HaplotypeScore=261.6341;InbreedingCoeff=0.9968;MQ=85.18;MQ0=0;MQRankSum=-14.749;QD=68.69;ReadPosRankSum=-2.229;VQSLOD=2.5155;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,117,7556	1/1:3,7:10:18.06:750,18,0	0/0:25,0:26:66.18:0,66,3471	0/0:24,0:24:63.22:0,63,3579	0/0:19,0:19:51.17:0,51,3192	0/0:14,0:14:42.14:0,42,2866	0/0:27,0:27:78.27:0,78,4941	1/1:9,26:35:81.22:2538,81,0	0/0:32,0:32:90.31:0,90,5318	0/0:20,0:20:51.17:0,51,3064	0/0:9,0:9:24.08:0,24,1647	0/0:37,0:37:99:0,99,6457	1/1:1,17:19:42.14:1745,42,0	1/1:5,34:39:69.24:2876,69,0	0/0:30,0:30:84.29:0,84,5403	0/0:23,0:23:57.20:0,57,3475	0/0:33,0:33:99:0,99,6312	0/0:31,0:31:90.31:0,90,6117	1/1:10,15:25:45.13:1328,45,0	1/1:2,8:10:18.03:646,18,0	1/1:15,35:50:65.42:2408,65,0	1/1:2,10:12:24.04:871,24,0	0/0:12,0:12:33.11:0,33,2036	0/0:26,0:26:78.27:0,78,5231	1/1:1,12:13:30.10:1250,30,0	0/0:21,0:21:54.19:0,54,3519	1/1:4,11:15:30.10:1250,30,0	0/0:13,0:13:39.13:0,39,2695
chr10	37337354	.	GAA	G	9215.20	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-11.917;DP=483;FS=0.000;HRun=11;HaplotypeScore=70.8039;InbreedingCoeff=0.9361;MQ=72.40;MQ0=0;MQRankSum=-2.840;QD=24.00;ReadPosRankSum=1.412;VQSLOD=4.5675;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,38:42:84.18:894,84,0	1/1:1,6:7:9.02:96,9,0	0/0:9,0:8:12.03:0,12,166	0/0:12,0:12:24.72:0,25,271	1/1:3,21:24:60.04:623,60,0	1/1:1,16:17:45.11:479,45,0	1/1:3,18:21:39.09:415,39,0	1/1:4,17:21:48.16:531,48,0	1/1:2,13:15:24.03:255,24,0	1/1:3,14:17:42.04:424,42,0	1/1:3,7:10:18.01:192,18,0	0/0:4,0:20:37.18:0,37,128	1/1:3,9:12:21.04:224,21,0	1/1:2,8:10:21.03:223,21,0	1/1:3,18:21:39.09:415,39,0	1/1:1,16:17:33.08:351,33,0	1/1:2,31:33:80.93:862,81,0	0/0:3,0:27:52.40:0,52,180	1/1:1,11:12:33.07:342,33,0	1/1:5,12:17:39:397,39,0	1/1:0,11:11:33.08:351,33,0	1/1:2,8:10:24.04:255,24,0	0/0:2,0:14:24.83:0,25,86	0/0:0,1:17:2.33:0,2,72	1/1:1,10:11:30.06:319,30,0	1/1:1,15:16:45.11:478,45,0	1/1:1,29:32:74.76:833,75,0	1/1:0,8:8:24.06:255,24,0
chr10	37340239	.	A	ACTGT	29166.25	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-12.513;DP=666;FS=2.169;HRun=0;HaplotypeScore=113.5281;InbreedingCoeff=0.9953;MQ=81.31;MQ0=0;MQRankSum=-7.234;QD=67.20;ReadPosRankSum=1.206;VQSLOD=6.8343;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,111,2286	1/1:0,7:9:18.06:504,18,0	0/0:26,0:26:68.95:0,69,1288	0/0:18,0:18:51.04:0,51,889	1/1:3,7:10:18.06:483,18,0	0/0:26,0:26:75.26:0,75,1572	0/0:33,0:33:99:0,99,2010	1/1:6,14:22:66.21:1804,66,0	1/1:3,18:23:60.21:1714,60,0	0/0:18,0:18:54.19:0,54,1132	0/0:13,0:13:33.11:0,33,677	1/1:0,24:28:69.12:1973,69,0	1/1:0,18:19:48.16:1368,48,0	1/1:0,20:21:57.18:1650,57,0	0/0:29,0:29:84.29:0,84,1762	1/1:1,14:17:42.14:1212,42,0	1/1:6,49:57:29.47:4092,29,0	0/0:31,0:31:90.29:0,90,1833	1/1:2,15:18:54.17:1491,54,0	1/1:2,15:18:30.10:854,30,0	1/1:7,39:49:83.03:2362,83,0	1/1:5,8:16:21.07:552,21,0	1/1:2,12:14:33.11:856,33,0	1/1:2,22:25:57.20:1649,57,0	1/1:2,22:25:60.21:1667,60,0	1/1:3,24:30:90.29:2457,90,0	1/1:1,22:27:69.24:1956,69,0	1/1:0,6:6:18.06:521,18,0
chr10	37343798	.	G	GA	381.72	PASS	AB=0.750;AC=14;AF=0.304;AN=46;BaseQRankSum=-1.864;DP=115;FS=1.384;HRun=9;HaplotypeScore=47.1291;InbreedingCoeff=0.5144;MQ=77.88;MQ0=2;MQRankSum=0.807;QD=13.63;ReadPosRankSum=-1.845;VQSLOD=2.7345;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:3,0:2:6:0,6,52	0/1:0,1:1:0:0,0,0	0/0:12,0:6:10.95:0,11,88	0/0:16,0:7:3.01:0,3,29	0/0:4,0:4:5.99:0,6,52	0/0:4,0:4:5.99:0,6,51	0/0:1,0:1:3:0,3,26	1/1:0,6:6:18.05:199,18,0	0/0:3,0:3:5.99:0,6,52	0/0:6,0:6:8.98:0,9,77	1/1:4,0:4:0.47:1,0,0	0/0:5,0:5:2.98:0,3,26	./.	./.	0/0:2,0:2:2.99:0,3,26	0/0:4,0:4:11.95:0,12,97	0/0:12,0:12:5.99:0,6,52	0/0:4,0:3:9:0,9,78	1/1:2,2:4:11.82:112,12,0	1/1:0,1:1:3.01:34,3,0	./.	1/1:1,1:2:3.01:33,3,0	0/0:2,0:2:3.47:0,3,27	./.	0/1:2,0:2:0:0,0,0	0/0:4,0:4:5.98:0,6,52	1/1:4,4:8:13.59:135,14,0	./.
chr10	37343841	.	TTTAGTTTTTTTTTTTTTTGTTTG	T	2282.19	PASS	AB=0.859;AC=5;AF=0.089;AN=56;BaseQRankSum=1.944;DP=316;FS=6.634;HRun=0;HaplotypeScore=141.3720;InbreedingCoeff=0.3152;MQ=72.41;MQ0=19;MQRankSum=-2.198;QD=44.75;ReadPosRankSum=4.453;VQSLOD=2.2626;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:5:11.99:0,12,174	0/0:2,0:2:5.99:0,6,184	0/0:74,0:23:38.42:0,38,826	0/0:80,0:22:39.42:0,39,795	0/1:5,6:11:31.90:210,0,32	0/0:5,0:5:12.04:0,12,366	0/0:1,0:1:3.01:0,3,89	0/0:8,0:8:24.03:0,24,763	0/1:12,1:13:1.77:745,0,2	0/0:10,0:10:27.04:0,27,578	0/0:4,0:4:11.95:0,12,173	0/0:5,0:5:15.02:0,15,694	0/0:6,0:6:15.05:0,15,658	0/0:4,0:3:9.03:0,9,403	0/0:5,0:5:15.01:0,15,452	0/1:5,0:5:4.74:563,0,5	1/1:22,0:22:18.05:884,18,0	0/0:2,0:1:3.01:0,3,121	0/0:6,0:6:18.06:0,18,616	0/0:6,0:6:15.05:0,15,546	0/0:3,0:2:3:0,3,27	0/0:5,0:5:15.05:0,15,553	0/0:2,0:2:6.02:0,6,296	0/0:1,0:1:3.01:0,3,146	0/0:5,0:5:12.01:0,12,337	0/0:6,0:6:18.04:0,18,269	0/0:12,0:12:36.12:0,36,1738	0/0:7,0:7:15.05:0,15,503
chr10	37343842	.	TTAGTTTTTTTTTTTTTTGTTTG	T	2767.78	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=-0.144;DP=304;FS=6.615;HRun=0;HaplotypeScore=129.4492;InbreedingCoeff=0.5514;MQ=69.24;MQ0=19;MQRankSum=-0.623;QD=60.17;ReadPosRankSum=5.339;VQSLOD=2.4572;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:5:11.66:0,12,140	0/0:2,0:2:5.99:0,6,169	0/0:72,0:22:35.40:0,35,715	0/0:75,0:20:36.19:0,36,708	0/1:9,0:9:23.11:245,0,23	0/0:5,0:5:12.04:0,12,308	0/0:1,0:1:3.01:0,3,75	0/0:6,0:6:18.06:0,18,658	1/1:1,11:12:15.05:869,15,0	0/0:10,0:10:27.01:0,27,508	0/0:4,0:4:8.99:0,9,137	0/0:5,0:5:15.02:0,15,637	0/0:5,0:6:15.05:0,15,584	0/0:4,0:3:9.03:0,9,368	0/0:5,0:5:14.94:0,15,406	1/1:1,3:4:12.04:711,12,0	1/1:0,21:21:18.06:1083,18,0	0/0:2,0:1:3.01:0,3,107	0/0:6,0:6:18.06:0,18,520	0/0:5,0:6:15.01:0,15,477	0/0:3,0:2:3:0,3,25	0/0:5,0:5:15.05:0,15,476	0/0:2,0:2:6.02:0,6,270	0/0:1,0:1:3.01:0,3,132	0/0:5,0:5:12:0,12,304	0/0:6,0:6:17.99:0,18,237	0/0:12,0:12:36.12:0,36,1558	0/0:7,0:7:15.05:0,15,433
chr10	37343843	.	TAG	T	3438.79	PASS	AB=0.923;AC=53;AF=0.946;AN=56;BaseQRankSum=-0.148;DP=298;FS=52.827;HRun=0;HaplotypeScore=65.6260;InbreedingCoeff=0.0691;MQ=68.30;MQ0=19;MQRankSum=-1.774;QD=11.54;ReadPosRankSum=4.704;VQSLOD=1.4494;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,3:5:11.95:128,12,0	1/1:0,2:2:6.02:73,6,0	0/1:68,0:20:19.87:20,0,144	0/1:71,2:20:1.23:1,0,151	1/1:9,0:9:9.18:50,9,0	1/1:4,1:5:11.92:91,12,0	1/1:1,0:1:3:25,3,0	1/1:4,1:6:17.87:184,18,0	1/1:12,0:12:14.73:113,15,0	1/1:2,8:10:27.02:305,27,0	1/1:1,2:3:8.86:89,9,0	1/1:4,1:5:14.30:150,14,0	1/1:3,3:6:15.05:192,15,0	1/1:0,4:3:9.03:113,9,0	1/1:4,1:5:14.32:96,14,0	1/1:4,0:4:11.86:91,12,0	1/1:21,0:21:17.98:152,18,0	1/1:2,0:1:2.94:18,3,0	1/1:5,0:6:17.87:162,18,0	1/1:4,1:5:12.03:153,12,0	1/1:3,0:2:3.01:37,3,0	1/1:3,2:5:15.05:206,15,0	1/1:1,1:2:6.02:69,6,0	1/1:1,0:1:2.60:10,3,0	0/1:4,1:5:9.13:114,0,9	1/1:4,2:6:18.05:237,18,0	1/1:5,6:12:35.60:441,36,0	1/1:5,2:7:14.90:117,15,0
chr10	37343853	.	T	TGG	172.51	PASS	AB=0.925;AC=9;AF=0.161;AN=56;BaseQRankSum=-0.500;DP=301;FS=0.000;HRun=0;HaplotypeScore=80.3500;InbreedingCoeff=0.1276;MQ=51.98;MQ0=21;MQRankSum=-0.747;QD=3.59;ReadPosRankSum=-0.391;VQSLOD=1.6621;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:5,0:4:11.62:12,0,28	0/0:2,0:2:3.48:0,3,44	0/0:69,0:18:6.40:0,6,240	0/0:67,0:17:19.34:0,19,208	0/0:9,0:9:11.90:0,12,115	1/1:2,2:5:4.40:56,4,0	1/1:0,1:1:3.01:37,3,0	0/0:7,0:7:21.03:0,21,250	0/0:12,0:12:14.51:0,15,88	0/1:9,2:11:30.84:86,0,31	0/0:3,0:3:7.83:0,8,55	0/0:5,0:5:12.51:0,13,158	0/0:6,0:6:15.04:0,15,177	0/0:4,0:3:9.02:0,9,102	0/1:4,1:5:9.22:10,0,9	0/0:4,0:4:11.62:0,12,70	0/0:21,0:21:17.25:0,17,89	0/0:3,0:2:4.83:0,5,43	0/0:6,0:6:0.77:0,1,157	0/0:5,0:5:12.03:0,12,147	0/0:3,0:2:1.82:0,2,5	0/0:5,0:5:15.05:0,15,209	0/0:2,0:2:6.02:0,6,89	0/0:1,0:1:3.01:0,3,38	0/0:4,0:4:8.98:0,9,108	0/1:4,0:4:1.94:2,0,24	0/0:12,0:12:36:0,36,451	0/1:16,1:17:93.76:94,0,241
chr10	37343854	.	T	TGG	78.48	PASS	AB=0.882;AC=10;AF=0.179;AN=56;BaseQRankSum=-0.173;DP=293;FS=4.484;HRun=0;HaplotypeScore=77.4735;InbreedingCoeff=0.2102;MQ=52.30;MQ0=19;MQRankSum=-1.326;QD=1.78;ReadPosRankSum=-0.463;VQSLOD=1.4642;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:2,1:3:26.26:36,0,26	0/0:1,0:1:3.01:0,3,36	0/0:68,0:18:29.67:0,30,304	0/0:67,0:17:25.03:0,25,250	0/0:9,0:9:11.63:0,12,88	1/1:4,0:5:2.91:32,3,0	1/1:1,0:1:2.68:11,3,0	0/0:7,0:7:21.06:0,21,264	0/0:12,0:12:14.50:0,15,88	0/1:10,0:10:28.35:28,0,38	0/0:2,1:3:7.05:0,7,48	0/0:4,0:4:12.04:0,12,157	0/0:6,0:6:15.04:0,15,172	0/0:4,0:3:9.02:0,9,101	0/0:5,0:5:2.71:0,3,11	0/0:4,0:4:11.62:0,12,69	0/0:21,0:21:17.25:0,17,89	0/0:3,0:2:5.75:0,6,51	0/1:4,1:5:17.23:17,0,157	0/0:5,0:5:12.03:0,12,146	0/0:3,0:2:1.55:0,2,4	0/0:6,0:6:15.05:0,15,196	0/0:2,0:2:6.02:0,6,88	0/0:1,0:1:3.01:0,3,38	0/0:4,0:4:8.24:0,8,94	1/1:3,0:3:4.45:44,4,0	0/0:12,0:12:36.07:0,36,420	0/1:16,1:17:42.17:42,0,254
chr10	37343863	.	TGGG	T	564.88	PASS	AB=0.800;AC=14;AF=0.269;AN=52;BaseQRankSum=2.705;DP=219;FS=3.612;HRun=3;HaplotypeScore=54.2978;InbreedingCoeff=-0.2286;MQ=50.99;MQ0=15;MQRankSum=-2.234;QD=9.11;ReadPosRankSum=-0.048;VQSLOD=-0.2357;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:3,0:2:0:0,0,0	0/1:3,0:3:27.74:35,0,28	0/0:45,0:10:17.99:0,18,289	0/0:44,0:13:12.98:0,13,374	0/0:7,0:7:4.56:0,5,38	0/0:3,0:3:0.88:0,1,14	./.	0/1:5,1:4:27.57:28,0,73	0/0:12,0:12:10.24:0,10,41	0/0:3,0:3:2.79:0,3,34	0/0:2,0:2:3.48:0,3,33	0/1:1,2:3:6.03:58,0,6	0/1:3,3:6:51.77:110,0,52	0/1:2,3:4:61.13:68,0,61	0/0:3,0:3:8.89:0,9,85	0/0:4,0:4:8.27:0,8,27	0/0:21,0:21:11.78:0,12,35	0/0:3,0:2:5.85:0,6,48	0/0:3,0:3:9.02:0,9,93	0/1:2,1:3:20.43:36,0,20	0/0:4,0:2:3.01:0,3,32	0/1:2,1:3:14.39:14,0,39	0/1:2,0:2:7.02:7,0,29	./.	0/1:2,1:3:30.24:30,0,43	1/1:1,0:1:2.90:16,3,0	0/1:4,8:12:72.08:286,0,72	0/1:12,0:12:12.74:13,0,69
chr10	37345598	.	TA	T	744.63	PASS	AB=0.941;AC=5;AF=0.089;AN=56;BaseQRankSum=5.667;DP=684;FS=0.554;HRun=11;HaplotypeScore=70.1034;InbreedingCoeff=0.7965;MQ=74.88;MQ0=1;MQRankSum=0.684;QD=12.41;ReadPosRankSum=0.489;VQSLOD=3.4936;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:49:99:0,117,1200	0/0:13,0:13:36.09:0,36,381	0/0:19,1:19:20.79:0,21,172	0/0:15,0:14:19.48:0,19,245	0/0:22,2:24:44.52:0,45,672	0/0:20,0:20:48.12:0,48,512	0/0:22,1:23:35.51:0,36,583	0/0:28,0:28:57.83:0,58,562	0/0:39,0:39:99:0,105,1109	0/0:26,2:28:35.50:0,36,583	0/0:18,0:19:50.96:0,51,526	0/0:29,0:29:81.67:0,82,857	0/0:28,0:29:75.02:0,75,782	0/0:26,1:27:41.48:0,41,629	0/0:26,0:26:70.05:0,70,730	0/0:25,0:25:38.55:0,39,590	0/0:23,0:23:63.12:0,63,654	0/1:15,1:16:1.70:2,0,371	0/0:18,1:20:26.20:0,26,457	0/0:19,0:21:47.94:0,48,486	0/0:21,0:21:26.57:0,27,480	0/0:21,0:22:66:0,66,685	0/0:15,0:15:45.11:0,45,479	0/0:34,0:34:90.21:0,90,952	0/0:19,2:21:4.85:0,5,462	1/1:5,31:36:89.86:739,90,0	0/0:32,1:33:50.32:0,50,712	1/1:0,8:8:14.98:123,15,0
chr10	37346186	.	AACAC	A	209.19	PASS	AB=0.953;AC=19;AF=0.559;AN=34;BaseQRankSum=0.753;DP=467;FS=0.000;HRun=0;HaplotypeScore=94.9070;InbreedingCoeff=0.2606;MQ=62.97;MQ0=25;MQRankSum=-0.800;QD=1.00;ReadPosRankSum=0.706;VQSLOD=1.6585;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:25:10.59:0,11,174	./.	./.	./.	0/0:8,0:8:3.01:0,3,44	0/1:22,0:22:26.33:26,0,60	0/0:25,0:24:0:0,0,0	./.	1/1:15,0:16:5.70:29,6,0	1/1:15,0:15:3.01:42,3,0	./.	0/0:9,0:11:2.12:0,2,29	1/1:11,0:11:0.83:2,1,0	0/1:16,0:15:18.93:19,0,31	0/0:19,0:17:0:0,0,0	1/1:8,0:9:1.25:3,1,0	0/0:16,0:16:5.48:0,5,32	1/1:20,5:25:7.86:89,8,0	0/1:16,0:16:0:0,0,0	./.	./.	./.	./.	1/1:41,0:39:6.05:56,6,0	./.	1/1:18,0:18:2.98:21,3,0	1/1:15,0:14:3:28,3,0	./.
chr10	37347582	.	TGGG	T	4108.73	PASS	AB=0.708;AC=18;AF=0.321;AN=56;BaseQRankSum=-9.374;DP=597;FS=2.845;HRun=11;HaplotypeScore=110.6078;InbreedingCoeff=0.5834;MQ=65.43;MQ0=7;MQRankSum=-0.979;QD=15.56;ReadPosRankSum=5.100;VQSLOD=1.7589;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:10,35:46:81.10:1032,81,0	0/0:2,0:9:11.57:0,12,82	0/0:30,0:21:21.84:0,22,416	0/1:16,0:13:9.63:10,0,162	0/0:5,0:19:13.60:0,14,44	1/1:1,19:20:48.11:611,48,0	1/1:6,24:30:54.06:683,54,0	0/0:11,0:18:12:0,12,106	0/1:3,0:21:16.78:17,0,19	1/1:8,15:23:48.09:584,48,0	1/1:3,3:6:6.01:78,6,0	0/0:21,0:27:24.07:0,24,373	0/0:6,0:20:28.64:0,29,218	0/0:16,0:20:35.96:0,36,339	1/1:3,24:26:45.04:552,45,0	0/0:10,1:29:0.79:0,1,36	0/1:5,1:32:7.76:8,0,31	1/1:7,16:22:39.11:512,39,0	0/0:8,0:14:23.76:0,24,176	0/0:5,0:15:23.89:0,24,188	0/0:25,0:47:54.54:0,55,402	0/0:10,0:13:11.47:0,11,78	0/0:3,0:4:2.99:0,3,24	0/0:19,0:31:24.05:0,24,364	0/0:12,0:14:15.86:0,16,142	0/1:12,1:18:18.51:22,0,19	0/0:12,0:17:34.04:0,34,297	0/0:1,0:5:3.74:0,4,8
chr10	37347591	.	GGGT	G	1356.81	PASS	AB=0.980;AC=12;AF=0.214;AN=56;BaseQRankSum=3.162;DP=544;FS=15.233;HRun=0;HaplotypeScore=108.8501;InbreedingCoeff=0.5260;MQ=69.66;MQ0=6;MQRankSum=-2.720;QD=7.67;ReadPosRankSum=7.940;VQSLOD=0.7365;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:40,0:40:8.58:366,9,0	0/0:9,0:9:17.89:0,18,140	0/0:25,0:16:33.45:0,33,469	0/1:16,0:14:1.93:2,0,318	0/0:19,0:19:27.70:0,28,169	1/1:19,0:19:44.02:246,44,0	0/1:32,1:32:64.34:263,0,64	0/0:14,0:14:33.01:0,33,338	0/0:23,1:24:15.97:0,16,241	0/1:18,1:19:29.41:170,0,29	1/1:3,1:4:5.95:58,6,0	0/0:19,0:19:36.45:0,36,459	0/0:24,0:24:47.42:0,47,421	0/0:22,0:22:62.90:0,63,685	1/1:25,0:24:42.27:254,42,0	0/0:25,0:25:31.94:0,32,174	0/0:30,0:30:50.60:0,51,247	0/1:21,0:20:40.40:159,0,40	0/0:16,0:16:36.01:0,36,290	0/0:17,0:17:31.75:0,32,261	0/0:39,0:38:84.12:0,84,795	0/0:11,0:11:24.39:0,24,212	0/0:1,0:1:3:0,3,28	0/0:26,0:26:38.79:0,39,530	0/0:8,0:8:23.58:0,24,252	0/0:18,0:18:24.53:0,25,195	0/0:15,0:15:41.42:0,41,375	0/0:5,0:5:10.57:0,11,50
chr10	37347592	.	GGT	G	662.46	PASS	AB=0.929;AC=9;AF=0.161;AN=56;BaseQRankSum=0.909;DP=544;FS=51.058;HRun=0;HaplotypeScore=101.8354;InbreedingCoeff=0.1522;MQ=69.84;MQ0=6;MQRankSum=0.175;QD=4.87;ReadPosRankSum=7.074;VQSLOD=0.4678;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:61.29:0,61,301	0/0:8,0:8:11.11:0,11,83	0/0:21,0:14:30.50:0,31,340	0/0:15,0:13:21.85:0,22,279	0/1:16,3:19:42.49:151,0,42	0/0:19,0:19:35.92:0,36,142	0/0:34,0:33:46.47:0,46,242	0/0:15,0:15:35.77:0,36,279	0/1:24,0:24:64.04:140,0,64	0/0:19,0:19:27.60:0,28,200	0/1:4,0:4:1.26:10,0,1	0/0:19,0:19:33.46:0,33,360	0/0:24,0:24:30.60:0,31,253	0/0:22,0:22:59.16:0,59,449	0/0:26,0:25:31.86:0,32,128	0/1:22,3:25:8.46:165,0,8	1/1:29,1:30:8.86:190,9,0	0/0:21,0:20:42.20:0,42,201	0/0:17,0:17:26.64:0,27,253	0/0:17,0:17:13.87:0,14,156	0/0:39,0:38:37.35:0,37,433	0/1:11,0:11:16.23:16,0,131	0/0:1,0:1:2.92:0,3,17	0/0:26,0:26:38.69:0,39,433	0/0:8,0:8:12.82:0,13,133	0/1:12,6:18:92.51:103,0,93	0/0:15,0:15:27.35:0,27,222	0/1:5,0:5:10.68:28,0,11
chr10	37355853	.	G	GA	1715.46	PASS	AB=0.763;AC=17;AF=0.304;AN=56;BaseQRankSum=-4.889;DP=605;FS=6.427;HRun=14;HaplotypeScore=73.8204;InbreedingCoeff=0.3506;MQ=53.52;MQ0=32;MQRankSum=-1.303;QD=6.19;ReadPosRankSum=-0.704;VQSLOD=2.3124;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:23,11:35:18.68:310,0,19	0/0:9,0:9:23.57:0,24,150	0/1:41,0:6:6.55:7,0,10	0/0:31,0:4:8.76:0,9,54	0/1:20,1:19:25.28:25,0,77	0/1:7,14:21:5.66:188,0,6	1/1:15,7:21:9.14:180,9,0	0/0:28,0:29:35.53:0,36,288	0/0:19,0:19:37.28:0,37,224	1/1:10,9:20:5.01:173,5,0	0/1:2,11:13:3.76:90,0,4	0/0:9,0:22:22.07:0,22,62	0/0:17,1:18:7.28:0,7,181	0/0:17,0:18:4.04:0,4,132	0/1:6,12:18:12.09:155,0,12	0/0:16,2:18:1.89:0,2,129	0/0:36,0:36:70.97:0,71,421	1/1:6,18:25:23.82:194,24,0	0/0:23,0:26:10.02:0,10,137	0/0:15,0:15:29.08:0,29,164	0/0:15,0:15:36.42:0,36,221	0/0:15,1:16:14.07:0,14,155	0/0:4,0:10:7.02:0,7,31	0/0:12,0:21:22.15:0,22,65	0/0:14,2:17:10.41:0,10,178	1/1:7,21:28:37.41:424,37,0	0/1:18,2:20:44.56:45,0,212	1/1:5,4:8:8.18:100,8,0
chr10	37355941	.	CGCGTGTGTGT	C	4262.16	PASS	AB=0.996;AC=34;AF=0.607;AN=56;BaseQRankSum=-3.853;DP=466;FS=22.149;HRun=0;HaplotypeScore=130.2533;InbreedingCoeff=0.1722;MQ=75.67;MQ0=30;MQRankSum=-2.166;QD=13.49;ReadPosRankSum=0.087;VQSLOD=2.3130;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:12,0:14:32.35:32,0,435	1/1:5,0:4:11.86:84,12,0	0/0:42,0:25:49.93:0,50,525	0/0:41,0:25:42.38:0,42,515	0/1:13,0:13:99:136,0,325	0/1:10,0:9:99:101,0,169	0/1:25,0:23:98.42:98,0,684	1/1:24,0:18:48:432,48,0	0/0:10,0:9:2.13:0,2,604	0/1:13,0:13:99:131,0,277	0/1:10,0:7:30.88:31,0,131	0/0:11,0:11:21.48:0,21,554	1/1:1,6:6:3.01:100,3,0	1/1:1,8:9:9.03:203,9,0	0/1:4,0:12:52.83:53,0,114	0/1:21,0:22:42.89:43,0,956	0/1:15,0:24:94.47:94,0,872	0/1:12,0:13:79.84:80,0,288	1/1:7,12:14:38.07:489,38,0	1/1:0,7:9:12.04:275,12,0	1/1:32,1:30:44.64:410,45,0	1/1:1,6:8:12.04:291,12,0	0/0:8,0:8:14.88:0,15,630	0/0:36,0:35:71.51:0,72,1870	1/1:8,0:8:14.94:151,15,0	1/1:0,0:12:32.91:383,33,0	1/1:11,3:12:32.91:541,33,0	1/1:7,0:5:14.83:104,15,0
chr10	37355943	.	CGT	C	125.29	PASS	AB=0.974;AC=16;AF=0.348;AN=46;BaseQRankSum=3.464;DP=481;FS=2.275;HRun=0;HaplotypeScore=98.9945;InbreedingCoeff=0.3351;MQ=69.92;MQ0=31;MQRankSum=-2.772;QD=0.65;ReadPosRankSum=0.968;VQSLOD=1.9364;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:21.57:0,22,171	./.	0/1:39,0:21:0:0,0,0	./.	0/0:12,0:12:4.25:0,4,79	0/0:14,0:13:9.47:0,9,81	0/1:27,0:25:20.38:20,0,147	./.	0/0:12,0:10:21.01:0,21,213	0/0:16,0:15:10.68:0,11,78	0/0:11,0:8:5.99:0,6,50	0/1:9,2:11:35.31:83,0,35	1/1:7,0:6:2.84:14,3,0	1/1:10,0:9:2.80:13,3,0	0/0:13,0:13:3:0,3,26	0/0:23,0:23:30.04:0,30,352	0/0:24,0:24:24.05:0,24,299	0/0:14,0:14:14.84:0,15,104	1/1:20,0:14:5.68:28,6,0	0/1:10,0:10:6.63:15,0,7	0/1:33,0:29:0.01:0,0,0	0/1:8,0:8:5.58:6,0,19	0/0:7,0:8:12.51:0,13,175	0/0:30,9:38:0.40:0,0,324	./.	1/1:12,0:12:5.68:28,6,0	1/1:16,0:12:11.36:55,11,0	./.
chr10	37357669	.	GGAAAGAAAGAAAGAAAGAAAGAAAGAAA	G	2382.59	PASS	AB=1.000;AC=19;AF=0.380;AN=50;BaseQRankSum=1.870;DP=516;FS=2.535;HRun=0;HaplotypeScore=362.8757;InbreedingCoeff=0.3718;MQ=52.93;MQ0=15;MQRankSum=-1.062;QD=10.45;ReadPosRankSum=-2.084;VQSLOD=1.1866;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:21:17.94:180,18,0	0/0:4,0:4:6.01:0,6,56	./.	./.	0/0:29,0:29:51.17:0,51,1687	1/1:14,0:14:18.06:362,18,0	1/1:17,0:17:11.07:140,11,0	0/0:22,0:18:8.86:0,9,57	0/0:21,0:21:45.15:0,45,2101	1/1:6,20:26:46.36:655,46,0	1/1:4,10:14:8.79:52,9,0	0/0:18,0:18:12.03:0,12,202	0/1:25,0:25:96.65:97,0,319	0/1:15,0:14:67.96:68,0,197	1/1:20,0:20:30.10:555,30,0	0/0:29,0:29:69.50:0,69,4338	0/0:24,0:23:22.14:0,22,1079	0/1:16,0:15:39.47:170,0,39	0/1:20,0:20:99:100,0,134	0/1:17,0:17:85.09:85,0,305	0/1:6,0:6:1.92:10,0,2	0/0:16,0:16:15.04:0,15,240	0/0:24,0:23:54.14:0,54,3784	0/0:18,0:16:27.08:0,27,980	0/0:28,0:28:21:0,21,281	0/0:20,0:20:2.61:0,3,8	0/1:16,0:16:86.13:86,0,334	./.
chr10	37357697	.	AG	A	225.34	PASS	AB=0.697;AC=2;AF=0.038;AN=52;BaseQRankSum=2.317;DP=483;FS=1.271;HRun=1;HaplotypeScore=150.7435;InbreedingCoeff=-0.0419;MQ=50.11;MQ0=10;MQRankSum=-3.982;QD=9.39;ReadPosRankSum=-1.542;VQSLOD=0.8160;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:24:61.71:0,62,776	0/0:3,0:3:9.02:0,9,112	./.	./.	0/0:25,0:25:60.06:0,60,755	0/0:16,0:16:48.16:0,48,665	0/0:14,0:14:42.12:0,42,546	0/0:23,0:16:45.58:0,46,455	0/0:23,0:23:63.14:0,63,823	0/0:21,0:21:51.16:0,51,667	0/0:11,0:11:14.91:0,15,145	0/0:18,0:18:14.92:0,15,146	0/0:27,0:27:81.26:0,81,1115	0/0:12,0:12:33.11:0,33,467	0/0:19,0:19:57.19:0,57,782	0/0:28,0:28:81.14:0,81,1077	0/0:21,0:20:57.03:0,57,739	0/0:20,0:20:59.77:0,60,751	0/0:18,0:17:46.66:0,47,592	0/0:20,0:20:60.20:0,60,838	0/0:7,0:7:21.07:0,21,281	0/0:19,0:19:45.13:0,45,589	0/0:23,0:22:63.49:0,63,745	0/0:23,0:22:65.99:0,66,872	0/0:20,0:20:45.13:0,45,603	0/1:10,6:16:99:193,0,103	0/0:20,0:20:60.19:0,60,826	0/1:4,4:8:26.94:120,0,27
chr10	37357719	.	AAAGAAAGAAAGC	A	5433.97	PASS	AB=1.000;AC=36;AF=0.643;AN=56;BaseQRankSum=-6.184;DP=509;FS=6.958;HRun=0;HaplotypeScore=223.1743;InbreedingCoeff=0.7502;MQ=52.89;MQ0=8;MQRankSum=2.424;QD=14.97;ReadPosRankSum=-0.814;VQSLOD=2.6014;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:54.55:0,55,462	1/1:2,0:2:5.99:50,6,0	0/0:5,0:3:9.02:0,9,97	0/0:3,0:1:2.99:0,3,24	1/1:15,11:26:35.62:593,36,0	0/0:15,0:15:45.03:0,45,460	0/0:17,0:17:50.85:0,51,516	1/1:21,0:17:41.71:349,42,0	1/1:23,0:23:10.67:568,11,0	0/0:29,0:29:60.36:0,60,577	0/0:15,0:15:19.86:0,20,147	1/1:0,18:18:6.02:198,6,0	1/1:23,0:23:37.42:345,37,0	1/1:11,0:11:15.39:131,15,0	0/0:22,0:22:65.94:0,66,591	0/1:29,0:29:99:175,0,706	1/1:23,0:23:58.80:539,59,0	0/0:19,0:19:54.99:0,55,478	1/1:16,0:13:21.21:225,21,0	1/1:26,0:26:35.64:295,36,0	1/1:12,0:12:35.91:294,36,0	1/1:19,0:19:7.52:214,8,0	0/1:25,0:25:99:110,0,888	1/1:25,0:24:9.71:268,10,0	1/1:20,0:20:21.14:186,21,0	1/1:14,0:14:41.88:353,42,0	1/1:22,0:22:43.32:391,43,0	1/1:8,0:7:20.82:150,21,0
chr10	37358143	.	GCACC	G	6402.05	PASS	AB=1.000;AC=32;AF=0.571;AN=56;BaseQRankSum=-2.692;DP=633;FS=5.581;HRun=0;HaplotypeScore=157.6739;InbreedingCoeff=0.1460;MQ=56.86;MQ0=4;MQRankSum=-1.714;QD=13.20;ReadPosRankSum=2.265;VQSLOD=4.4292;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:32,0:32:99:177,0,164	1/1:2,0:2:5.99:49,6,0	0/0:34,0:19:29.40:0,29,267	0/0:25,0:15:29.18:0,29,303	0/0:13,0:13:16.59:0,17,189	0/1:18,0:18:43.61:192,0,44	0/1:44,0:44:74.55:466,0,75	1/1:20,7:27:62.94:549,63,0	0/1:29,0:29:32.28:32,0,279	0/1:31,0:30:99:266,0,169	0/1:12,0:12:41.35:86,0,41	0/0:29,0:29:32.41:0,32,736	1/1:7,12:19:37.53:623,38,0	1/1:18,9:27:78.02:914,78,0	0/1:38,0:38:99:267,0,274	0/1:16,0:16:15.75:16,0,128	0/1:20,0:20:11:11,0,151	0/1:28,0:28:99:148,0,204	1/1:4,11:15:32.92:346,33,0	1/1:1,16:17:21.05:424,21,0	1/1:7,34:40:11.96:175,12,0	1/1:0,24:24:21.07:365,21,0	0/0:20,0:20:29.45:0,29,345	0/0:26,0:26:37.23:0,37,520	1/1:13,8:21:51:659,51,0	0/1:6,0:6:16.37:16,0,39	1/1:8,8:16:44.99:617,45,0	0/1:2,0:2:2.36:2,0,12
chr10	37358192	.	CATTT	C	1233.58	PASS	AB=0.978;AC=19;AF=0.339;AN=56;BaseQRankSum=6.150;DP=699;FS=1.405;HRun=0;HaplotypeScore=200.5970;InbreedingCoeff=-0.3371;MQ=45.21;MQ0=40;MQRankSum=-1.489;QD=2.84;ReadPosRankSum=-4.104;VQSLOD=1.9366;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:26:0.63:1,0,745	1/1:5,0:4:0.41:15,0,0	0/0:47,0:15:32.66:0,33,531	0/0:59,0:13:34.41:0,34,404	0/1:16,0:14:0.31:0,0,308	0/1:16,1:17:25.71:26,0,665	0/1:29,0:28:58.20:58,0,941	0/0:31,0:27:72.18:0,72,899	0/1:26,0:26:99:104,0,272	0/1:21,0:21:4.05:4,0,843	0/1:13,0:13:10.82:11,0,342	0/1:33,0:33:99:304,0,715	0/1:33,0:33:8.89:107,0,9	0/1:26,0:26:3.15:3,0,63	0/1:24,5:29:99:129,0,784	0/1:22,0:22:79.02:79,0,359	0/1:26,0:26:99:128,0,231	0/1:20,5:25:99:143,0,528	0/0:20,0:16:12.50:0,13,538	0/0:20,0:19:14.09:0,14,218	0/0:32,0:29:16.38:0,16,249	0/0:25,0:24:29.67:0,30,198	0/0:14,6:20:27.17:0,27,400	0/1:33,0:33:99:161,0,785	0/1:28,0:27:33.17:49,0,33	0/0:10,0:10:8.97:0,9,298	0/1:25,0:23:58.25:58,0,139	0/0:1,0:1:1.82:0,2,5
chr10	37358204	.	CATCCATCCATAA	C	4857.22	PASS	AB=1.000;AC=27;AF=0.482;AN=56;BaseQRankSum=7.389;DP=799;FS=2.894;HRun=0;HaplotypeScore=263.4655;InbreedingCoeff=0.4632;MQ=42.55;MQ0=94;MQRankSum=-8.683;QD=11.79;ReadPosRankSum=-2.801;VQSLOD=3.4218;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:31:33.74:0,34,955	1/1:8,0:7:7.93:206,8,0	0/0:86,0:17:40.72:0,41,522	0/0:92,0:14:31.48:0,31,350	0/0:17,0:15:28.23:0,28,564	0/0:26,0:25:24.20:0,24,893	0/0:33,0:31:17.13:0,17,1255	1/1:22,0:18:21.07:293,21,0	0/1:27,0:27:37.14:37,0,938	0/1:25,0:25:6.26:6,0,880	0/1:14,0:14:22.93:23,0,415	0/0:35,0:35:61.28:0,61,2166	1/1:15,20:35:39.06:823,39,0	1/1:14,10:24:29.70:385,30,0	0/1:32,0:32:99:109,0,862	0/1:26,0:26:55.18:55,0,1084	0/1:33,0:33:14.18:14,0,503	0/1:24,0:23:23.01:23,0,519	1/1:19,0:15:6.02:123,6,0	1/1:18,0:17:20.86:266,21,0	1/1:30,0:27:17.79:242,18,0	1/1:21,1:21:22.48:253,22,0	0/0:18,0:18:29.91:0,30,922	0/0:35,0:35:31.86:0,32,1993	1/1:25,3:28:66:1108,66,0	0/0:12,0:12:33.10:0,33,742	1/1:24,1:23:54.03:891,54,0	0/0:1,0:1:3.01:0,3,40
chr10	37358208	.	C	CATTT	4973.22	PASS	AB=0.951;AC=15;AF=0.268;AN=56;BaseQRankSum=6.744;DP=817;FS=4.613;HRun=0;HaplotypeScore=192.0024;InbreedingCoeff=0.6825;MQ=42.15;MQ0=120;MQRankSum=-6.907;QD=24.74;ReadPosRankSum=-4.647;VQSLOD=3.7064;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:32:65.62:0,66,1105	1/1:3,5:7:5.37:181,5,0	0/0:103,0:17:43.33:0,43,759	0/0:100,0:14:36.39:0,36,573	0/0:12,0:15:32.77:0,33,574	0/0:25,0:24:50.96:0,51,865	0/0:35,0:33:70.52:0,71,1163	0/0:15,0:12:26.84:0,27,277	0/0:28,0:28:66.19:0,66,1138	0/0:26,0:26:37.66:0,38,1009	0/0:15,0:15:24.04:0,24,415	0/0:34,0:34:81.85:0,82,1421	1/1:33,2:35:36.65:833,37,0	1/1:23,0:23:42.02:565,42,0	0/0:31,0:31:27.53:0,28,927	0/0:16,0:26:54.13:0,54,911	0/0:35,0:35:42.97:0,43,648	0/0:26,0:25:39.47:0,39,658	0/1:15,0:11:99:273,0,146	1/1:17,1:17:24.99:427,25,0	0/1:26,1:24:91.38:215,0,91	1/1:23,0:22:45.36:494,45,0	0/0:18,0:17:30.78:0,31,589	0/0:33,0:33:33.41:0,33,1153	1/1:24,4:28:66.29:1161,66,0	0/0:15,0:14:29.77:0,30,506	0/1:21,3:22:11.89:824,0,12	0/0:1,0:1:3.01:0,3,45
chr10	37358210	.	TCCA	T	917.52	PASS	AB=0.822;AC=9;AF=0.161;AN=56;BaseQRankSum=9.545;DP=807;FS=2.726;HRun=0;HaplotypeScore=179.6983;InbreedingCoeff=0.0563;MQ=42.25;MQ0=129;MQRankSum=-6.592;QD=5.30;ReadPosRankSum=-0.471;VQSLOD=2.9416;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:33:68.87:0,69,1425	0/0:6,1:7:2.55:0,3,71	0/0:109,0:17:45.15:0,45,972	0/0:103,0:14:35.98:0,36,728	0/0:17,0:16:30.97:0,31,690	0/0:24,0:23:51.17:0,51,1175	0/0:36,0:34:62.07:0,62,1525	0/0:12,0:9:26.89:0,27,222	0/0:29,0:29:65.62:0,66,1148	0/0:26,0:26:71.26:0,71,1437	0/0:16,0:16:24.08:0,24,561	0/0:33,0:33:96.31:0,96,1957	0/1:23,6:29:32.38:129,0,32	1/1:12,8:20:30.41:171,30,0	0/0:32,0:32:63.21:0,63,1406	0/0:26,0:26:25.14:0,25,945	0/0:35,0:35:42.69:0,43,735	0/0:24,0:23:39.60:0,40,886	0/1:10,2:8:48.77:49,0,230	0/1:12,3:14:69.51:97,0,70	0/1:28,1:25:77.10:77,0,79	0/1:12,4:15:10.49:122,0,10	0/0:19,0:18:34.54:0,35,785	0/0:34,0:34:74.10:0,74,1561	0/1:14,14:28:86.29:222,0,86	0/0:15,0:14:39.13:0,39,736	0/1:18,6:22:99:197,0,206	0/0:1,0:1:3.01:0,3,41
chr10	37358212	.	CATAA	C	4004.19	PASS	AB=0.882;AC=26;AF=0.464;AN=56;BaseQRankSum=8.466;DP=810;FS=2.231;HRun=0;HaplotypeScore=170.1855;InbreedingCoeff=0.5059;MQ=42.01;MQ0=136;MQRankSum=-8.445;QD=11.54;ReadPosRankSum=-1.700;VQSLOD=3.1922;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:32:34.28:0,34,888	1/1:7,0:7:3.42:73,3,0	0/0:116,0:17:41.18:0,41,527	0/0:110,0:14:31.90:0,32,352	0/1:17,0:16:3.02:3,0,427	0/0:24,0:23:37.93:0,38,726	0/1:38,0:36:99:189,0,948	1/1:3,7:7:21.07:294,21,0	0/1:16,14:30:99:258,0,703	0/0:25,0:25:10.11:0,10,845	0/0:15,0:15:12.98:0,13,372	0/0:31,0:31:61.19:0,61,1318	1/1:29,0:29:34.71:399,35,0	1/1:20,0:20:33.07:374,33,0	0/0:30,0:30:8.67:0,9,755	0/1:26,0:26:56.82:57,0,755	0/1:13,23:36:99:113,0,435	0/0:21,0:20:24.11:0,24,537	1/1:9,0:5:4.26:43,4,0	1/1:14,0:13:24.21:259,24,0	1/1:28,0:24:23.51:256,24,0	1/1:16,0:15:27.06:328,27,0	0/0:21,0:20:41.76:0,42,822	0/0:34,0:34:26.95:0,27,1278	1/1:28,0:28:67.24:746,67,0	0/1:15,0:14:38.57:39,0,557	1/1:24,0:22:36.60:574,37,0	0/0:1,0:1:3.01:0,3,40
chr10	37358216	.	A	AATCCATCC	4203.31	PASS	AB=1.000;AC=41;AF=0.854;AN=48;BaseQRankSum=2.970;DP=822;FS=0.739;HRun=0;HaplotypeScore=207.0164;InbreedingCoeff=0.3544;MQ=43.27;MQ0=135;MQRankSum=-5.357;QD=7.80;ReadPosRankSum=-1.859;VQSLOD=2.5323;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:28,7:34:4.83:60,5,0	1/1:7,0:7:8.85:85,9,0	./.	./.	1/1:18,0:17:2.47:14,2,0	1/1:18,7:26:3.01:56,3,0	1/1:41,0:39:28:502,28,0	./.	0/1:30,0:30:6.85:121,0,7	1/1:19,7:29:26.82:555,27,0	1/1:10,3:15:5.98:141,6,0	0/1:32,0:32:6.06:6,0,964	1/1:29,0:29:18.06:335,18,0	1/1:20,0:20:3.01:56,3,0	1/1:20,11:35:12.04:388,12,0	1/1:25,0:25:9.03:178,9,0	0/1:33,0:33:0.75:118,0,1	1/1:11,10:22:6.02:242,6,0	1/1:7,0:3:6.02:93,6,0	1/1:15,0:14:6:64,6,0	1/1:30,0:26:9.65:128,10,0	1/1:17,0:16:9.02:113,9,0	0/0:22,0:21:24.94:0,25,445	0/0:36,0:36:29.40:0,29,971	1/1:30,0:29:30.80:398,31,0	1/1:15,0:14:12.04:258,12,0	1/1:25,0:23:22.62:293,23,0	./.
chr10	37358732	.	AC	A	3650.30	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=9.789;DP=658;FS=3.130;HRun=1;HaplotypeScore=64.0801;InbreedingCoeff=0.9952;MQ=86.80;MQ0=1;MQRankSum=-1.049;QD=35.44;ReadPosRankSum=3.852;VQSLOD=3.7759;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:43:99:0,120,1918	0/0:10,0:10:30.10:0,30,477	0/0:22,0:22:63.04:0,63,931	0/0:26,0:26:69.22:0,69,1038	1/1:0,24:24:63.21:881,63,0	0/0:22,0:22:66.23:0,66,1053	0/0:22,0:22:66.23:0,66,1055	0/0:30,0:30:87.30:0,87,1389	1/1:0,25:25:63.21:881,63,0	0/0:22,0:22:66.23:0,66,1054	0/0:10,0:10:27.09:0,27,429	0/0:14,0:14:42.13:0,42,630	0/0:21,0:21:63.21:0,63,1005	0/0:19,0:19:54.18:0,54,863	0/0:31,0:31:93.30:0,93,1464	1/1:0,26:26:72.24:1007,72,0	1/1:0,28:28:63.21:881,63,0	0/0:29,0:29:84.26:0,84,1305	0/0:27,0:27:81.28:0,81,1295	0/0:28,0:28:78.27:0,78,1247	0/0:38,0:38:99:0,114,1794	0/0:24,0:24:69.24:0,69,1102	0/0:17,0:17:51.17:0,51,813	0/0:25,0:25:72.25:0,72,1147	0/0:23,0:23:66.21:0,66,1031	0/0:18,0:18:54.18:0,54,858	0/0:27,0:25:81.28:0,81,1294	0/0:6,0:6:15.05:0,15,240
chr10	37359663	.	C	CCAAA	8506.02	PASS	AB=0.980;AC=17;AF=0.304;AN=56;BaseQRankSum=-11.448;DP=743;FS=0.766;HRun=0;HaplotypeScore=136.6016;InbreedingCoeff=0.7426;MQ=68.72;MQ0=1;MQRankSum=2.670;QD=27.18;ReadPosRankSum=-2.329;VQSLOD=4.0502;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:17,34:52:75.21:1771,75,0	0/0:10,0:10:24.07:0,24,359	0/0:23,0:20:18.02:0,18,247	0/0:31,0:28:33.08:0,33,472	0/1:7,0:39:24.85:25,0,434	1/1:7,23:31:48.12:1098,48,0	1/1:9,19:28:36.12:878,36,0	0/0:38,0:39:57.16:0,57,828	0/0:2,0:22:45.05:0,45,420	1/1:16,21:37:69.23:1527,69,0	1/1:0,16:16:44.98:935,45,0	0/0:29,0:29:66.20:0,66,1050	0/0:21,0:21:45.14:0,45,709	0/0:24,0:24:57.08:0,57,845	1/1:10,16:28:33.11:805,33,0	0/0:3,0:23:18.14:0,18,434	0/1:12,0:20:70.78:71,0,160	1/1:7,23:30:52.42:1203,52,0	0/0:13,0:13:24.07:0,24,369	0/0:24,0:24:51.11:0,51,701	0/0:32,0:32:54.18:0,54,875	0/0:15,0:15:36.11:0,36,559	0/0:33,0:33:72.24:0,72,1154	0/0:31,1:32:69.18:0,69,1068	0/0:26,0:26:60.16:0,60,928	0/1:29,2:31:99:193,0,1019	0/0:27,0:27:60.20:0,60,983	0/0:6,0:6:18.06:0,18,291
chr10	37359722	.	CCAAA	C	4774.85	PASS	AC=26;AF=0.520;AN=50;BaseQRankSum=10.331;DP=508;FS=1.937;HRun=0;HaplotypeScore=121.8947;InbreedingCoeff=0.8261;MQ=59.38;MQ0=1;MQRankSum=-2.964;QD=27.76;ReadPosRankSum=1.442;VQSLOD=4.5828;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:78.20:0,78,1667	1/1:0,1:1:2.98:21,3,0	0/0:24,0:16:23.99:0,24,336	0/0:26,0:22:32.90:0,33,644	1/1:17,8:25:30.03:430,30,0	0/0:26,1:27:8.05:0,8,1178	0/0:20,0:20:54.11:0,54,1145	./.	1/1:8,10:18:51.12:734,51,0	0/0:25,0:25:42.14:0,42,1001	0/0:16,0:16:36.10:0,36,753	0/0:27,0:27:60.18:0,60,1343	1/1:0,9:9:2.26:19,2,0	1/1:0,7:7:8.94:89,9,0	0/0:26,0:26:57.17:0,57,1316	1/1:13,17:30:60.12:923,60,0	1/1:3,19:21:54.11:822,54,0	0/0:25,0:25:45.05:0,45,1000	./.	1/1:0,2:2:6.02:97,6,0	1/1:0,5:5:2.97:20,3,0	./.	0/0:34,0:34:72.16:0,72,1458	0/0:41,0:41:99:0,99,2210	1/1:0,4:4:2.97:20,3,0	1/1:7,19:26:5.27:815,5,0	1/1:0,7:7:8.78:147,9,0	1/1:2,14:16:39.13:639,39,0
chr10	37362603	.	CAG	C	5353.96	PASS	AB=1.000;AC=27;AF=0.482;AN=56;BaseQRankSum=11.947;DP=820;FS=1.668;HRun=0;HaplotypeScore=141.1085;InbreedingCoeff=-0.1030;MQ=56.63;MQ0=39;MQRankSum=-0.697;QD=9.20;ReadPosRankSum=12.316;VQSLOD=2.7209;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:41,0:39:99:117,0,148	1/1:11,0:11:23.18:103,23,0	0/0:39,0:12:29.75:0,30,272	0/0:40,0:25:51.89:0,52,720	1/1:4,15:19:24.96:633,25,0	0/1:21,0:19:79.19:79,0,122	0/1:32,0:28:91.12:91,0,146	0/0:27,0:23:9.27:0,9,390	1/1:2,25:26:50.95:721,51,0	0/1:32,0:30:88.24:88,0,149	0/1:12,0:12:15.97:111,0,16	0/0:37,0:36:73.60:0,74,1319	0/1:37,0:32:99:166,0,112	0/1:24,0:22:34.41:127,0,34	0/1:32,0:30:69.58:217,0,70	1/1:2,27:28:12.02:649,12,0	1/1:16,23:35:60.64:1192,61,0	0/0:28,0:27:29.20:0,29,642	0/1:33,0:29:5.93:133,0,6	0/1:31,0:29:96.11:154,0,96	0/1:54,0:52:99:240,0,111	0/1:21,0:20:69.66:70,0,113	0/0:20,0:20:60.08:0,60,774	0/0:47,0:47:99:0,121,2030	0/1:19,0:18:54.66:90,0,55	0/1:33,0:29:62.11:144,0,62	0/1:23,0:21:23.54:149,0,24	1/1:12,0:12:0.51:79,1,0
chr10	37362605	.	GAC	G	11035.73	PASS	AB=0.836;AC=40;AF=0.714;AN=56;BaseQRankSum=7.359;DP=811;FS=1.762;HRun=0;HaplotypeScore=122.4414;InbreedingCoeff=0.7123;MQ=57.40;MQ0=39;MQRankSum=2.267;QD=18.33;ReadPosRankSum=5.838;VQSLOD=5.1458;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:14,25:37:48.01:553,48,0	1/1:2,9:11:27.04:313,27,0	0/0:38,0:13:20.94:0,21,229	0/0:40,0:25:42.51:0,43,545	0/1:18,0:18:0.36:257,0,0	1/1:11,10:19:33.09:390,33,0	1/1:10,20:26:36.11:440,36,0	0/1:20,8:24:1.89:207,0,2	1/1:27,0:26:48.08:333,48,0	1/1:6,22:28:62.69:693,63,0	1/1:2,10:12:30.09:362,30,0	0/0:35,1:35:39.42:0,39,1044	1/1:12,24:31:41.86:645,42,0	1/1:6,18:22:47.82:561,48,0	1/1:7,24:29:66.21:805,66,0	0/1:29,0:29:17.51:262,0,18	1/1:38,0:36:10.88:439,11,0	0/0:27,1:27:10.30:0,10,222	1/1:8,25:29:65.98:709,66,0	1/1:11,20:30:50.55:681,51,0	1/1:11,43:52:87.25:1048,87,0	0/1:5,15:20:8.10:345,0,8	0/0:20,0:20:36.11:0,36,533	0/0:45,2:47:65.67:0,66,1484	1/1:5,14:18:33.10:403,33,0	1/1:6,25:28:31.28:785,31,0	1/1:6,16:20:42.13:513,42,0	1/1:1,11:12:24.08:293,24,0
chr10	37362607	.	C	CAG	3536.45	PASS	AB=0.969;AC=21;AF=0.375;AN=56;BaseQRankSum=1.274;DP=801;FS=16.042;HRun=0;HaplotypeScore=149.0437;InbreedingCoeff=0.4412;MQ=57.23;MQ0=38;MQRankSum=-1.369;QD=8.58;ReadPosRankSum=-2.101;VQSLOD=1.9605;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:40,2:40:59.14:323,59,0	0/0:11,0:11:24.96:0,25,125	0/0:36,0:13:32.83:0,33,326	0/0:38,0:24:59.24:0,59,751	0/0:19,0:19:53.96:0,54,489	1/1:18,1:17:43.30:288,43,0	1/1:25,2:23:46.63:278,47,0	0/1:26,2:24:44.43:44,0,398	0/0:27,0:26:10.99:0,11,358	1/1:31,0:29:75.68:560,76,0	1/1:12,0:12:31.66:170,32,0	0/0:35,0:34:95.93:0,96,1218	0/1:34,2:31:25.32:25,0,237	0/0:22,1:21:35.24:0,35,197	1/1:30,1:29:63.26:361,63,0	0/0:30,0:29:29.26:0,29,392	0/0:41,0:37:71.83:0,72,750	1/1:3,24:26:48.15:846,48,0	0/1:33,0:29:98.02:256,0,98	0/0:30,2:30:6.34:0,6,344	0/1:51,1:50:99:134,0,307	0/0:22,0:21:8.84:0,9,226	0/0:19,0:19:54.07:0,54,650	0/0:45,0:45:99:0,120,1623	0/1:18,1:18:30.59:31,0,165	0/1:31,1:28:99:171,0,257	0/1:23,0:21:49.12:49,0,151	0/0:11,0:11:21.96:0,22,97
chr10	37363766	.	C	CTGTA	17441.85	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=14.021;DP=814;FS=6.410;HRun=0;HaplotypeScore=143.3283;InbreedingCoeff=0.9784;MQ=80.46;MQ0=0;MQRankSum=-11.397;QD=58.33;ReadPosRankSum=-0.439;VQSLOD=6.0901;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,138,2525	1/1:4,14:19:45:1159,45,0	0/0:27,0:27:72.24:0,72,1270	0/0:29,0:29:58.23:0,58,1248	0/0:22,0:22:60.21:0,60,1109	0/0:27,0:27:78.16:0,78,1407	0/0:28,0:28:84.27:0,84,1533	1/1:12,22:38:99:2552,108,0	0/0:28,0:28:81.25:0,81,1449	0/0:24,0:24:69.24:0,69,1288	0/0:26,0:26:72.23:0,72,1312	0/0:31,0:31:90.27:0,90,1579	1/1:6,34:42:99:2667,102,0	1/1:4,19:25:4.22:1437,4,0	0/0:41,0:41:99:0,111,2040	0/0:34,0:34:99:0,99,1754	0/0:24,0:24:64.10:0,64,1168	0/0:18,0:18:48.12:0,48,848	1/1:10,17:28:75.22:1791,75,0	1/1:7,14:22:33.11:879,33,0	1/1:4,23:31:60.68:1570,61,0	1/1:9,24:34:66.23:1755,66,0	0/0:31,0:31:90.31:0,90,1679	0/0:35,0:35:96.33:0,96,1784	1/1:3,23:26:54.19:1438,54,0	0/0:24,0:24:66.22:0,66,1197	1/1:7,27:34:84.29:2194,84,0	0/0:17,0:17:36.11:0,36,640
chr10	37364321	.	A	AGAGT	1225.62	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-0.993;DP=637;FS=12.473;HRun=0;HaplotypeScore=115.6345;InbreedingCoeff=0.8914;MQ=76.89;MQ0=4;MQRankSum=-1.235;QD=28.50;ReadPosRankSum=-2.111;VQSLOD=2.6600;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:36.10:0,36,574	0/0:7,0:7:8.99:0,9,120	0/0:42,0:36:63.64:0,64,980	0/0:44,0:39:62.91:0,63,888	0/0:15,0:15:27.08:0,27,426	0/0:19,0:19:39.09:0,39,575	0/0:22,0:22:45.05:0,45,642	0/0:36,0:36:75.18:0,75,1128	0/0:23,0:23:54.16:0,54,853	0/0:20,0:20:39.12:0,39,605	0/0:5,0:5:6:0,6,100	0/0:31,0:31:75.23:0,75,1180	0/0:16,0:15:39.10:0,39,575	0/0:16,0:16:39.11:0,39,603	0/0:29,0:29:75.22:0,75,1178	0/0:34,0:33:87.28:0,87,1429	0/0:28,0:27:57.03:0,57,757	0/0:21,0:21:48.03:0,48,666	0/0:18,0:18:30.97:0,31,455	0/0:14,0:14:30.09:0,30,478	0/0:47,0:47:81.19:0,81,1232	0/0:13,0:13:23.95:0,24,376	0/0:6,0:6:9.03:0,9,147	0/0:30,0:29:60.02:0,60,925	0/0:17,0:17:36.11:0,36,577	1/1:10,12:28:27.91:894,28,0	0/0:21,0:20:57.18:0,57,926	1/1:4,11:15:20.81:451,21,0
chr10	37364345	.	AGT	A	122.56	PASS	AB=0.976;AC=9;AF=0.180;AN=50;BaseQRankSum=2.547;DP=740;FS=7.363;HRun=0;HaplotypeScore=95.1272;InbreedingCoeff=-0.1138;MQ=53.40;MQ0=40;MQRankSum=-0.090;QD=0.52;ReadPosRankSum=-0.150;VQSLOD=0.6223;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:23:7.04:0,7,98	0/0:7,0:6:3.01:0,3,42	./.	./.	0/0:17,2:16:9:0,9,104	0/1:25,1:25:26.31:26,0,186	0/0:29,0:27:12:0,12,166	0/0:46,0:46:4.05:0,4,10	0/1:31,0:29:15.37:15,0,159	0/0:23,0:23:5.58:0,6,180	./.	0/0:26,0:25:4.49:0,4,74	0/0:14,1:14:14.51:0,15,142	0/0:23,1:23:13.34:0,13,158	0/0:32,0:30:14.26:0,14,178	0/1:40,0:37:13.84:14,0,165	0/1:31,1:27:52.08:52,0,189	0/1:27,1:24:7.57:8,0,200	0/0:25,0:23:12.70:0,13,86	0/0:13,0:13:6.02:0,6,72	0/0:64,0:57:12.04:0,12,158	0/0:13,1:14:2.64:0,3,24	0/0:6,0:6:3.01:0,3,40	0/1:31,1:30:25.04:29,0,25	0/0:24,0:23:11.90:0,12,125	0/1:26,1:27:71.53:72,0,113	0/0:22,0:21:14.95:0,15,134	1/1:19,0:17:3.43:33,3,0
chr10	37364394	.	GTGTA	G	498.38	PASS	AC=20;AF=0.400;AN=50;BaseQRankSum=3.997;DP=600;FS=34.988;HRun=0;HaplotypeScore=118.8364;InbreedingCoeff=0.7803;MQ=47.82;MQ0=39;MQRankSum=0.662;QD=2.24;ReadPosRankSum=-1.133;VQSLOD=0.3455;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:32:38.92:0,39,333	1/1:8,0:8:8.82:61,9,0	0/0:2,0:2:5.97:0,6,52	0/0:8,0:6:4.28:0,4,86	0/0:21,0:17:11.98:0,12,97	0/0:28,0:27:24.60:0,25,350	0/0:37,0:34:38.71:0,39,320	1/1:28,0:25:11.83:77,12,0	0/0:22,0:21:15.13:0,15,112	0/0:27,0:25:44.97:0,45,484	0/0:12,0:12:26.95:0,27,242	1/1:4,20:23:2.86:49,3,0	1/1:14,0:13:14.86:107,15,0	1/1:23,0:22:8.52:69,9,0	0/0:8,0:26:9.02:0,9,125	0/0:20,0:19:24:0,24,265	0/0:30,0:27:23.84:0,24,259	0/0:26,0:23:38.88:0,39,404	1/1:18,0:17:5.93:42,6,0	1/1:12,0:11:2.94:18,3,0	1/1:48,0:42:2.98:21,3,0	./.	./.	1/1:13,15:26:8.81:121,9,0	./.	0/0:21,0:21:38.86:0,39,413	1/1:16,0:14:13.01:114,13,0	0/0:10,0:8:6:0,6,71
chr10	37364396	.	GTATGTATGTATGTA	G	2521.64	PASS	AB=0.899;AC=11;AF=0.204;AN=54;BaseQRankSum=-1.784;DP=583;FS=13.434;HRun=0;HaplotypeScore=171.1033;InbreedingCoeff=0.0947;MQ=47.98;MQ0=40;MQRankSum=0.661;QD=13.27;ReadPosRankSum=-3.427;VQSLOD=1.1778;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:34,0:32:19.59:20,0,1470	0/1:7,0:7:19.66:246,0,20	0/0:3,0:2:6.02:0,6,244	0/0:9,0:6:18.06:0,18,511	0/0:19,0:15:18.06:0,18,566	0/0:25,0:25:10.03:0,10,1673	0/0:39,0:36:51.03:0,51,1699	1/1:13,14:23:47:771,47,0	0/0:22,0:21:12.60:0,13,602	0/0:25,0:23:54.68:0,55,2543	0/0:12,0:12:27.09:0,27,1048	0/0:24,0:23:9.93:0,10,166	0/1:13,0:12:21.47:431,0,21	0/1:21,0:19:43.43:280,0,43	0/0:30,0:27:21.07:0,21,940	0/0:19,0:17:21.46:0,21,1186	0/0:30,0:27:1.96:0,2,1420	0/0:27,0:23:25.33:0,25,1837	1/1:11,7:17:9.69:272,10,0	0/1:6,6:11:28.40:63,0,28	0/1:17,0:38:73.14:73,0,83	./.	0/0:6,0:10:3.01:0,3,82	0/0:28,0:26:18.43:0,18,465	0/0:19,0:19:6.89:0,7,62	0/0:21,0:21:47.64:0,48,2014	0/1:15,0:13:21.65:519,0,22	0/0:12,0:8:3.75:0,4,268
chr10	37365354	.	C	CA	5506.74	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-14.388;DP=588;FS=0.000;HRun=7;HaplotypeScore=85.7954;InbreedingCoeff=0.9820;MQ=83.87;MQ0=0;MQRankSum=-0.553;QD=29.29;ReadPosRankSum=-1.771;VQSLOD=4.3186;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,108,1036	1/1:1,3:4:5.81:72,6,0	0/0:25,0:25:49.42:0,49,465	0/0:13,0:13:19.90:0,20,209	0/0:17,0:17:42.04:0,42,398	0/0:22,0:22:57.09:0,57,550	0/0:24,0:24:66.08:0,66,630	1/1:3,22:25:63.18:750,63,0	0/0:17,0:17:45.06:0,45,435	0/0:16,0:16:36.05:0,36,348	0/0:19,0:19:51.08:0,51,492	0/0:23,0:23:57.08:0,57,545	1/1:4,25:29:78.24:937,78,0	1/1:5,14:19:48.15:573,48,0	0/0:9,0:9:27.03:0,27,255	0/0:20,0:20:57.05:0,57,537	0/0:43,0:43:99:0,123,1182	0/0:25,0:25:66.08:0,66,629	1/1:6,18:24:57.16:674,57,0	1/1:2,19:21:57.17:689,57,0	1/1:1,7:8:21.06:254,21,0	1/1:4,14:18:39.12:471,39,0	0/0:20,0:20:51.08:0,51,493	0/0:28,0:28:84.06:0,84,795	1/1:1,20:21:57.17:689,57,0	0/0:28,0:28:72.11:0,72,695	1/1:4,15:17:33.10:399,33,0	0/0:9,0:9:27.04:0,27,261
chr10	37366984	.	TGCCA	T	5767.80	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=11.226;DP=518;FS=28.255;HRun=0;HaplotypeScore=85.6654;InbreedingCoeff=0.9714;MQ=80.56;MQ0=0;MQRankSum=-3.798;QD=31.87;ReadPosRankSum=4.399;VQSLOD=2.6505;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,23:26:48.16:823,48,0	0/0:11,0:11:33:0,33,641	0/0:20,0:20:45.12:0,45,832	0/0:23,0:23:38.28:0,38,861	0/0:7,0:7:18.02:0,18,328	1/1:3,15:18:36.12:617,36,0	1/1:6,20:26:39.13:669,39,0	0/0:25,0:24:63.16:0,63,1289	0/0:14,0:14:39.12:0,39,928	1/1:5,15:20:42.13:672,42,0	1/1:1,5:6:6.02:103,6,0	0/0:25,0:25:65.90:0,66,1381	0/0:18,0:18:38.99:0,39,792	0/0:16,0:16:36.04:0,36,790	1/1:4,25:29:66.23:1119,66,0	0/0:15,0:15:36.11:0,36,784	0/0:20,0:20:54.09:0,54,1241	1/1:3,18:21:36.07:585,36,0	0/0:19,0:18:36.39:0,36,742	0/0:10,0:10:21.06:0,21,477	0/0:30,0:30:75.22:0,75,1749	0/0:10,0:10:21.07:0,21,528	0/0:12,0:12:27.04:0,27,562	0/0:28,0:28:72.23:0,72,1756	0/0:17,0:17:36.11:0,36,857	1/1:5,24:29:61.46:1026,61,0	0/0:17,0:17:45.14:0,45,1051	1/1:0,6:6:9.03:154,9,0
chr10	37370611	.	CGGGG	C	1622.78	PASS	AB=0.667;AC=7;AF=0.125;AN=56;BaseQRankSum=3.893;DP=371;FS=8.307;HRun=13;HaplotypeScore=73.2157;InbreedingCoeff=0.5788;MQ=66.12;MQ0=1;MQRankSum=-5.133;QD=23.18;ReadPosRankSum=6.369;VQSLOD=1.6127;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:22:21.03:0,21,264	0/0:4,0:4:8.96:0,9,71	0/0:8,0:6:7.84:0,8,99	0/0:22,0:18:25.64:0,26,449	0/1:6,4:12:3.70:139,0,4	0/0:9,0:9:14.89:0,15,166	0/0:19,0:19:24.48:0,24,325	0/0:11,0:13:3.44:0,3,21	1/1:10,11:21:38.20:564,38,0	0/0:14,0:14:8.98:0,9,107	0/0:7,0:7:3.01:0,3,30	0/0:8,0:8:6.02:0,6,94	0/0:10,0:11:8.98:0,9,74	0/0:11,0:11:12:0,12,121	0/0:7,0:14:3.01:0,3,59	1/1:3,18:21:53.90:757,54,0	1/1:8,8:16:21:307,21,0	0/0:22,0:22:33.55:0,34,457	0/0:7,0:7:12.04:0,12,158	0/0:5,0:6:8.93:0,9,70	0/0:14,0:19:14.87:0,15,112	0/0:6,0:6:6.02:0,6,90	0/0:5,0:7:8.85:0,9,89	0/0:21,0:23:29.96:0,30,329	0/0:10,0:10:9.01:0,9,100	0/0:21,0:21:15.05:0,15,258	0/0:8,0:8:3.01:0,3,67	0/0:7,0:9:17.97:0,18,221
chr10	37370674	.	CA	C	1447.71	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=12.826;DP=530;FS=9.587;HRun=1;HaplotypeScore=98.8360;InbreedingCoeff=0.7891;MQ=64.43;MQ0=0;MQRankSum=-12.424;QD=15.08;ReadPosRankSum=0.962;VQSLOD=2.6821;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:77.85:0,78,1207	0/0:11,0:11:30.10:0,30,477	0/0:12,0:12:0.63:0,1,88	0/1:12,0:12:30.93:31,0,90	1/1:2,14:16:7.28:54,7,0	0/0:18,0:18:51.15:0,51,769	0/0:20,0:20:60.20:0,60,957	0/0:29,0:29:75.23:0,75,1138	1/1:3,24:27:65.52:543,66,0	0/0:9,0:9:24.08:0,24,383	0/0:10,0:10:24.07:0,24,357	0/0:32,0:32:96.30:0,96,1487	0/0:24,0:24:72.22:0,72,1098	0/0:18,0:18:54.16:0,54,817	0/0:32,0:32:87.28:0,87,1357	1/1:0,27:27:81:708,81,0	1/1:2,12:14:29.68:270,30,0	0/0:22,0:22:63.20:0,63,984	0/0:12,0:12:33.11:0,33,525	0/0:13,0:13:36.11:0,36,573	0/0:31,0:31:90.28:0,90,1392	0/0:15,0:15:39.13:0,39,623	0/0:18,0:18:48.13:0,48,714	0/0:35,0:35:99:0,105,1642	0/0:11,0:11:30.10:0,30,476	0/0:17,0:17:51.16:0,51,793	0/0:9,0:9:27.09:0,27,422	0/0:8,0:8:24.05:0,24,357
chr10	37370679	.	CTACG	C	2772.80	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=12.664;DP=539;FS=10.978;HRun=0;HaplotypeScore=123.2747;InbreedingCoeff=0.8968;MQ=63.77;MQ0=0;MQRankSum=-12.434;QD=36.01;ReadPosRankSum=1.263;VQSLOD=3.0545;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:87.30:0,87,2359	0/0:11,0:11:33.10:0,33,845	0/0:14,0:14:2.13:0,2,510	0/0:9,0:9:18.01:0,18,416	1/1:0,14:14:3.46:112,3,0	0/0:21,0:21:63.22:0,63,1707	0/0:22,0:22:66.21:0,66,1748	0/0:35,0:35:93.32:0,93,2385	1/1:0,24:24:66.22:1032,66,0	0/0:13,0:13:36.12:0,36,989	0/0:9,0:9:27.08:0,27,678	0/0:31,0:31:90.31:0,90,2424	0/0:25,0:25:75.26:0,75,2036	0/0:19,0:19:57.18:0,57,1485	0/0:33,0:33:93.32:0,93,2532	1/1:0,27:27:81.28:1307,81,0	1/1:0,12:12:30.10:473,30,0	0/0:21,0:21:63.22:0,63,1717	0/0:11,0:11:33.10:0,33,848	0/0:13,0:13:33.10:0,33,845	0/0:29,0:29:84.29:0,84,2274	0/0:14,0:14:39.13:0,39,1067	0/0:17,0:17:42.14:0,42,1150	0/0:35,0:35:99:0,105,2846	0/0:11,0:11:30.09:0,30,765	0/0:17,0:17:48.16:0,48,1313	0/0:12,0:12:36.12:0,36,937	0/0:9,0:9:27.08:0,27,680
chr10	37370732	.	C	CT	3497.97	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=13.446;DP=669;FS=1.442;HRun=0;HaplotypeScore=85.9826;InbreedingCoeff=0.9997;MQ=80.35;MQ0=0;MQRankSum=-5.332;QD=40.67;ReadPosRankSum=0.512;VQSLOD=4.0778;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,111,1552	0/0:15,0:15:45.08:0,45,605	0/0:21,0:21:60.16:0,60,811	0/0:18,0:18:51.07:0,51,622	1/1:0,15:15:39.02:552,39,0	0/0:30,0:30:90.30:0,90,1257	0/0:23,0:23:69.20:0,69,915	0/0:33,0:33:93.30:0,93,1267	1/1:0,22:22:63.21:938,63,0	0/0:19,0:19:57.18:0,57,779	0/0:11,0:11:33.11:0,33,461	0/0:33,0:33:93.31:0,93,1291	0/0:26,0:26:78.26:0,78,1091	0/0:29,0:29:84.23:0,84,1109	0/0:34,0:34:99:0,99,1369	1/1:1,32:33:93.31:1376,93,0	1/1:0,16:16:42.14:631,42,0	0/0:21,0:21:63.18:0,63,857	0/0:21,0:22:58.76:0,59,817	0/0:20,0:20:51.17:0,51,712	0/0:37,0:37:99:0,111,1518	0/0:19,0:19:57.18:0,57,779	0/0:17,0:17:51.17:0,51,710	0/0:41,0:41:99:0,123,1662	0/0:18,0:18:54.17:0,54,740	0/0:23,0:23:66.19:0,66,875	0/0:24,0:24:69.23:0,69,953	0/0:10,0:10:30.10:0,30,420
chr10	37371766	.	AC	A	1199.94	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.206;DP=731;FS=2.158;HRun=2;HaplotypeScore=72.5294;InbreedingCoeff=0.9799;MQ=83.89;MQ0=0;MQRankSum=-1.131;QD=31.58;ReadPosRankSum=1.152;VQSLOD=3.4972;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,150,2220	0/0:9,0:9:27.09:0,27,405	0/0:24,0:24:69.22:0,69,961	0/0:22,0:22:48.66:0,49,671	0/0:11,0:11:30.09:0,30,429	0/0:21,0:21:63.21:0,63,944	0/0:30,0:30:90.29:0,90,1330	0/0:28,0:28:81.27:0,81,1214	0/0:27,0:27:78.21:0,78,1123	0/0:19,0:19:57.18:0,57,827	0/0:11,0:11:33.10:0,33,474	0/0:41,0:41:99:0,123,1837	0/0:29,0:29:87.28:0,87,1277	0/0:32,0:32:90.29:0,90,1328	0/0:33,0:33:99:0,99,1427	0/0:31,0:31:90.30:0,90,1349	0/0:35,0:35:99:0,102,1480	0/0:42,0:42:99:0,123,1835	0/0:27,0:27:81.22:0,81,1155	0/0:19,0:19:57.19:0,57,851	0/0:60,0:60:99:0,174,2519	0/0:16,0:16:48.16:0,48,719	0/0:11,0:11:33.10:0,33,474	0/0:27,0:27:81.26:0,81,1193	0/0:16,0:16:48.16:0,48,719	1/1:2,25:27:11.30:887,11,0	0/0:21,0:21:63.21:0,63,943	1/1:0,11:11:33.11:428,33,0
chr10	37377358	.	T	TC	2603.43	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-9.918;DP=639;FS=3.480;HRun=6;HaplotypeScore=61.7849;InbreedingCoeff=0.9604;MQ=84.46;MQ0=0;MQRankSum=-1.704;QD=29.25;ReadPosRankSum=1.893;VQSLOD=4.5135;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:87.17:0,87,879	0/0:2,0:2:6.01:0,6,61	0/0:25,0:25:48:0,48,522	0/0:13,0:14:23.99:0,24,227	0/0:14,0:14:36.07:0,36,367	0/0:17,0:17:48.09:0,48,483	0/0:22,0:22:57.10:0,57,574	0/0:34,0:34:75.13:0,75,757	0/0:25,0:25:60.13:0,60,612	0/0:10,0:10:24.04:0,24,240	0/0:9,0:9:26.88:0,27,253	1/1:1,37:38:99:1274,102,0	0/0:32,0:32:78.17:0,78,795	0/0:37,0:37:99:0,102,1040	0/0:27,0:27:75.17:0,75,764	0/0:15,0:15:42.09:0,42,428	0/0:30,0:30:84.19:0,84,857	0/0:34,0:34:96.22:0,96,979	0/0:14,0:14:38.88:0,39,379	0/0:16,0:16:42.09:0,42,428	0/0:46,0:46:99:0,129,1308	0/0:16,0:16:39.07:0,39,392	1/1:0,17:17:45.14:566,45,0	1/1:5,29:34:72.23:906,72,0	0/0:16,0:16:42.07:0,42,420	0/0:26,0:26:69.15:0,69,704	0/0:26,0:24:78.16:0,78,787	0/0:11,0:11:21.01:0,21,205
chr10	37377763	.	ATTCCGTC	A	4462.10	PASS	AC=12;AF=0.222;AN=54;BaseQRankSum=4.833;DP=402;FS=31.513;HRun=0;HaplotypeScore=102.4176;InbreedingCoeff=0.9835;MQ=83.87;MQ0=2;MQRankSum=-11.711;QD=43.32;ReadPosRankSum=0.142;VQSLOD=2.4918;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,17:26:36.12:864,36,0	0/0:7,0:7:18.06:0,18,705	0/0:30,0:21:35:0,35,1267	0/0:21,0:19:38.24:0,38,1009	0/0:9,0:9:27.04:0,27,971	1/1:1,8:9:21.07:499,21,0	1/1:3,17:20:39.13:961,39,0	0/0:13,0:13:33.11:0,33,1287	0/0:11,0:11:33.11:0,33,1258	1/1:4,9:13:27.09:692,27,0	./.	0/0:18,0:18:54.19:0,54,2131	0/0:15,0:15:39.13:0,39,1472	0/0:9,0:9:21.07:0,21,833	1/1:0,11:11:24.08:576,24,0	0/0:11,0:11:30.10:0,30,1190	0/0:23,0:23:60.21:0,60,2351	1/1:9,15:24:39.05:870,39,0	0/0:14,0:14:36.12:0,36,1378	0/0:6,0:6:18.05:0,18,563	0/0:21,0:21:57.17:0,57,1928	0/0:6,0:6:15.05:0,15,589	0/0:9,0:9:21.07:0,21,758	0/0:24,0:24:66.23:0,66,2545	0/0:13,0:13:33.11:0,33,1285	0/0:16,0:16:45.14:0,45,1622	0/0:13,0:13:39.12:0,39,1321	0/0:4,0:4:12.04:0,12,464
chr10	37377784	.	AG	A	1711.66	PASS	AB=0.636;AC=23;AF=0.426;AN=54;BaseQRankSum=-3.942;DP=468;FS=10.193;HRun=11;HaplotypeScore=79.8298;InbreedingCoeff=0.7948;MQ=84.89;MQ0=4;MQRankSum=2.383;QD=9.95;ReadPosRankSum=4.701;VQSLOD=2.0144;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:23:15.69:0,16,251	1/1:2,2:4:2.99:25,3,0	0/0:47,0:22:31.99:0,32,221	0/0:30,0:20:16.13:0,16,146	0/0:6,0:10:5.95:0,6,47	0/0:9,0:9:11.98:0,12,107	0/0:20,1:22:20.22:0,20,386	1/1:9,4:13:8.95:68,9,0	0/0:13,0:15:13.96:0,14,76	0/0:13,0:17:23.12:0,23,141	./.	1/1:9,13:23:25.57:327,26,0	1/1:4,8:12:14.97:123,15,0	0/1:6,8:14:26.70:56,0,27	0/0:18,0:18:33.04:0,33,325	0/0:5,0:19:22.89:0,23,132	0/0:24,0:29:24.11:0,24,337	0/0:24,1:25:23.38:0,23,403	1/1:4,13:17:10.28:278,10,0	1/1:2,4:6:11.92:89,12,0	1/1:6,10:16:17.98:147,18,0	0/0:7,0:7:8.98:0,9,83	1/1:3,6:9:5.99:49,6,0	1/1:5,19:24:47.94:393,48,0	1/1:8,11:19:19.98:164,20,0	0/0:16,0:16:15.33:0,15,186	1/1:4,11:15:23.95:196,24,0	0/0:2,0:2:3:0,3,29
chr10	37379641	.	CCCA	C	4096.75	PASS	AB=0.973;AC=40;AF=0.714;AN=56;BaseQRankSum=0.932;DP=326;FS=8.059;HRun=0;HaplotypeScore=58.8701;InbreedingCoeff=0.1541;MQ=88.03;MQ0=0;MQRankSum=-4.474;QD=14.43;ReadPosRankSum=4.888;VQSLOD=1.5739;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,1:12:0.44:20,0,0	1/1:2,2:4:1.90:18,2,0	0/0:21,0:20:51.02:0,51,739	0/0:10,0:10:23.32:0,23,310	1/1:3,10:13:30.10:488,30,0	1/1:13,0:13:2.95:20,3,0	0/1:17,1:18:16.99:82,0,17	1/1:14,1:15:0.15:101,0,0	1/1:2,19:21:33.11:537,33,0	1/1:5,0:5:3:29,3,0	0/0:3,0:3:0.89:0,1,2	1/1:22,2:24:5.39:324,5,0	0/1:4,0:4:10.70:11,0,23	0/1:3,0:3:2.15:21,0,2	0/0:8,0:8:5.83:0,6,44	1/1:1,15:16:30.06:460,30,0	1/1:4,22:26:45.11:704,45,0	0/1:8,2:10:9.78:132,0,10	0/1:4,0:4:11.07:11,0,38	1/1:8,0:8:5.93:40,6,0	0/1:12,0:12:1.59:83,0,2	0/1:6,0:6:19.85:20,0,28	1/1:9,1:10:9.02:105,9,0	1/1:17,0:17:39.91:317,40,0	1/1:7,0:7:8.62:64,9,0	1/1:20,0:20:32.28:251,32,0	0/1:7,0:7:4.70:59,0,5	1/1:9,0:9:23.85:201,24,0
chr10	37379642	.	CCA	C	4217.94	PASS	AB=0.963;AC=49;AF=0.875;AN=56;BaseQRankSum=0.337;DP=316;FS=0.765;HRun=0;HaplotypeScore=52.9784;InbreedingCoeff=0.3457;MQ=86.65;MQ0=0;MQRankSum=-6.255;QD=14.70;ReadPosRankSum=3.783;VQSLOD=4.6622;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,1:12:8.37:56,8,0	1/1:3,1:4:5.71:32,6,0	0/0:20,0:19:44.36:0,44,611	0/0:9,0:9:23.17:0,23,268	1/1:12,1:13:29.99:256,30,0	1/1:1,11:12:2.96:20,3,0	1/1:7,11:18:14.93:200,15,0	1/1:14,0:14:13.97:99,14,0	1/1:21,0:21:32.99:282,33,0	1/1:4,0:4:3:29,3,0	1/1:3,0:3:2.98:22,3,0	1/1:4,20:24:21.54:531,22,0	1/1:4,0:4:8.09:50,8,0	1/1:3,0:3:1.57:23,2,0	0/1:7,1:8:3.08:55,0,3	1/1:15,0:15:29.96:251,30,0	1/1:24,1:25:45:400,45,0	1/1:8,2:10:26.81:248,27,0	0/1:4,0:4:9.55:16,0,10	1/1:7,0:7:5.93:40,6,0	1/1:12,0:12:12.84:99,13,0	0/1:5,0:5:9.67:31,0,10	1/1:2,7:9:9.02:114,9,0	1/1:11,6:17:42.06:488,42,0	1/1:7,0:7:8.98:75,9,0	1/1:4,16:20:33.02:368,33,0	1/1:7,0:7:13.21:99,13,0	1/1:1,8:9:24.07:335,24,0
chr10	37379643	.	CA	C	3559.62	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=0.871;DP=303;FS=0.000;HRun=1;HaplotypeScore=50.6622;InbreedingCoeff=0.5609;MQ=89.00;MQ0=0;MQRankSum=-7.457;QD=13.04;ReadPosRankSum=3.162;VQSLOD=2.3774;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,8:10:8.67:85,9,0	1/1:3,1:4:5.98:61,6,0	0/0:20,0:19:44.18:0,44,509	0/0:10,0:10:25.95:0,26,244	1/1:12,0:12:29.66:197,30,0	1/1:11,0:11:2.96:20,3,0	1/1:15,3:18:20.82:148,21,0	1/1:11,1:12:14.91:115,15,0	1/1:19,0:19:32.64:218,33,0	1/1:5,0:5:3:29,3,0	1/1:3,0:3:2.98:22,3,0	1/1:23,0:23:38.18:297,38,0	1/1:4,0:4:11.96:98,12,0	1/1:3,0:3:5.68:37,6,0	1/1:7,1:8:16.18:152,16,0	1/1:15,0:15:29.67:198,30,0	1/1:23,1:24:44.50:297,44,0	1/1:10,0:10:29.89:239,30,0	1/1:3,1:4:6.85:48,7,0	1/1:0,7:7:5.93:40,6,0	1/1:9,1:10:14.96:124,15,0	1/1:4,1:5:5.64:68,6,0	1/1:8,0:8:8.93:64,9,0	1/1:16,2:18:41.87:335,42,0	1/1:7,1:8:8.99:90,9,0	1/1:16,0:16:32.88:259,33,0	1/1:7,0:7:14.96:121,15,0	1/1:8,1:9:23.89:197,24,0
chr10	37381263	.	AG	A	952.58	PASS	AB=0.921;AC=14;AF=0.250;AN=56;BaseQRankSum=1.919;DP=368;FS=2.064;HRun=10;HaplotypeScore=46.9490;InbreedingCoeff=0.6039;MQ=69.46;MQ0=1;MQRankSum=-0.555;QD=9.82;ReadPosRankSum=5.524;VQSLOD=1.8212;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,1:22:3.99:0,4,245	0/0:4,0:4:6.02:0,6,64	0/0:8,0:8:15.01:0,15,156	0/1:12,1:10:21.55:22,0,115	1/1:2,2:4:5.99:52,6,0	0/0:2,0:2:3.01:0,3,33	0/1:19,2:21:0.99:1,0,436	0/0:14,0:14:18.05:0,18,199	1/1:1,6:7:14.98:130,15,0	0/0:12,0:12:9.02:0,9,100	0/0:9,0:9:2.51:0,3,112	0/0:20,0:21:39.15:0,39,215	0/0:7,0:7:15.03:0,15,155	0/0:14,1:15:8.83:0,9,294	0/0:10,0:10:27.06:0,27,291	1/1:0,11:12:29.03:240,29,0	1/1:7,22:29:59.97:521,60,0	0/0:24,1:25:22.07:0,22,472	0/0:16,0:16:24.05:0,24,254	0/0:2,0:2:2.04:0,2,6	0/0:54,5:61:21.22:0,21,857	0/0:8,0:8:9.02:0,9,99	0/0:3,0:5:2.84:0,3,14	0/0:16,0:18:26.40:0,26,173	0/0:5,0:5:9.02:0,9,99	1/1:3,4:7:11.99:104,12,0	0/0:7,0:7:12.02:0,12,125	1/1:1,3:4:5.99:52,6,0
chr10	37381540	.	GA	G	271.56	PASS	AB=0.877;AC=6;AF=0.111;AN=54;BaseQRankSum=2.795;DP=423;FS=4.223;HRun=10;HaplotypeScore=47.7238;InbreedingCoeff=0.4627;MQ=77.30;MQ0=1;MQRankSum=-0.790;QD=6.17;ReadPosRankSum=-1.342;VQSLOD=0.5992;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,102,1125	0/0:3,0:3:6.02:0,6,66	0/1:21,2:18:16.89:17,0,224	0/0:12,2:13:11.92:0,12,142	0/0:12,0:12:27.06:0,27,290	0/0:8,0:8:21.06:0,21,232	0/0:25,0:26:56.95:0,57,592	0/0:13,0:13:30.55:0,31,333	0/0:15,0:15:42.11:0,42,465	0/0:12,0:12:33.05:0,33,352	0/0:6,0:6:12.03:0,12,133	0/0:13,0:13:36.09:0,36,391	0/0:11,0:11:30.07:0,30,324	0/0:11,0:11:30.07:0,30,323	0/0:12,0:12:30.07:0,30,325	0/0:1,0:7:17.04:0,17,85	0/0:26,0:26:66.18:0,66,730	0/0:39,1:40:76.26:0,76,1068	0/0:20,1:21:4.52:0,5,441	./.	0/0:26,0:26:66.16:0,66,720	0/1:4,1:5:14.02:14,0,88	0/0:3,0:3:9.01:0,9,91	0/0:39,0:39:99:0,114,1252	0/0:11,0:11:27.07:0,27,293	1/1:2,13:15:38.99:338,39,0	0/0:9,0:11:32.75:0,33,327	1/1:1,0:1:3:26,3,0
chr10	37382197	.	G	GA	761.49	PASS	AB=0.866;AC=20;AF=0.370;AN=54;BaseQRankSum=-3.537;DP=311;FS=24.900;HRun=13;HaplotypeScore=43.9282;InbreedingCoeff=0.3929;MQ=66.82;MQ0=1;MQRankSum=-0.532;QD=5.90;ReadPosRankSum=-1.558;VQSLOD=0.0105;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:26.53:0,27,184	./.	0/0:12,0:6:8.65:0,9,54	0/1:5,0:4:12.05:15,0,12	0/1:3,0:3:0:0,0,0	0/1:6,1:7:7.01:7,0,102	0/0:27,0:29:63.45:0,63,422	1/1:5,3:10:2.96:133,3,0	0/0:4,3:7:5.87:0,6,41	0/0:4,0:5:10.96:0,11,68	0/0:1,0:1:2.97:0,3,20	0/0:14,0:14:17.51:0,18,121	1/1:0,3:3:6.01:56,6,0	0/1:4,2:6:14.57:22,0,15	0/0:6,0:8:13.90:0,14,88	0/0:7,0:7:14.84:0,15,103	0/0:17,1:22:24.91:0,25,283	0/0:37,2:39:18.46:0,18,417	1/1:5,10:18:22.09:249,22,0	1/1:0,2:2:6.01:56,6,0	0/1:8,9:17:40.73:90,0,41	1/1:4,2:6:4.25:31,4,0	0/0:2,0:2:2.47:0,2,19	0/1:30,3:34:22.20:22,0,292	1/1:1,5:6:9.01:84,9,0	0/0:4,0:13:12.36:0,12,36	1/1:3,9:12:17.81:167,18,0	0/0:1,0:3:4.07:0,4,12
chr10	37382770	.	T	TC	874.94	PASS	AC=16;AF=0.333;AN=48;BaseQRankSum=-5.818;DP=168;FS=3.042;HRun=8;HaplotypeScore=19.1465;InbreedingCoeff=0.6981;MQ=81.74;MQ0=0;MQRankSum=-1.364;QD=20.83;ReadPosRankSum=-0.609;VQSLOD=2.0869;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,14:16:33.10:381,33,0	./.	0/0:7,0:6:14.75:0,15,121	0/0:4,0:4:11.99:0,12,105	0/0:3,0:3:6:0,6,55	./.	1/1:0,9:9:24.07:277,24,0	0/0:6,0:6:5.99:0,6,55	0/0:7,0:7:17.97:0,18,157	1/1:0,2:2:3.01:35,3,0	1/1:0,1:1:3.01:35,3,0	0/0:4,0:4:2.98:0,3,27	./.	0/0:3,0:4:8.03:0,8,60	1/1:1,2:3:3.01:35,3,0	0/0:3,0:3:9:0,9,82	0/0:14,0:14:36.01:0,36,329	1/1:0,6:6:18.05:208,18,0	0/0:4,0:4:12.01:0,12,110	0/0:2,0:2:6:0,6,55	0/0:36,1:37:99:0,99,900	0/0:2,0:2:6:0,6,55	0/0:6,0:6:12.01:0,12,110	0/0:13,0:13:32.94:0,33,291	0/0:7,0:7:12:0,12,110	1/1:1,3:4:5.96:54,6,0	./.	1/1:0,0:1:2.84:14,3,0
chr10	37383086	.	TA	T	1710.03	PASS	AB=0.620;AC=30;AF=0.577;AN=52;BaseQRankSum=7.253;DP=297;FS=2.600;HRun=13;HaplotypeScore=39.2066;InbreedingCoeff=0.6422;MQ=75.25;MQ0=1;MQRankSum=-0.580;QD=9.00;ReadPosRankSum=1.118;VQSLOD=2.0307;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,20:27:58.66:422,59,0	1/1:1,0:2:2.03:6,2,0	0/0:13,0:9:11.56:0,12,82	0/0:9,0:8:0:0,0,0	0/0:4,0:4:9:0,9,83	1/1:2,6:9:18.77:120,19,0	0/1:7,8:16:29.47:129,0,29	1/1:2,0:18:33.70:110,34,0	0/0:7,0:7:15.02:0,15,146	0/0:3,0:3:0:0,0,0	1/1:3,0:3:2.97:22,3,0	0/0:12,0:12:30.02:0,30,282	1/1:4,0:8:9.95:29,10,0	1/1:4,0:16:21.12:66,21,0	1/1:1,9:10:23.86:175,24,0	0/0:2,0:2:6:0,6,53	0/0:23,0:23:60.08:0,60,574	1/1:10,27:37:77.28:559,77,0	1/1:4,0:14:20.35:59,20,0	./.	1/1:3,0:10:12.20:35,12,0	./.	0/0:4,1:5:9.01:0,9,87	0/0:24,2:26:32.17:0,32,469	1/1:0,0:6:10.19:29,10,0	0/1:2,4:6:14.12:69,0,14	1/1:2,0:5:6.11:18,6,0	1/1:1,2:3:5.96:44,6,0
chr10	37384134	.	CGG	C	1584.84	PASS	AB=0.889;AC=34;AF=0.810;AN=42;BaseQRankSum=-2.799;DP=193;FS=16.910;HRun=12;HaplotypeScore=37.4939;InbreedingCoeff=0.3971;MQ=62.82;MQ0=2;MQRankSum=-2.082;QD=10.29;ReadPosRankSum=1.588;VQSLOD=0.3489;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:10,5:15:18.03:182,18,0	./.	0/0:9,0:7:12.85:0,13,113	0/1:5,0:5:14.14:14,0,85	./.	1/1:6,5:11:11.99:121,12,0	1/1:7,4:12:14.73:133,15,0	1/1:4,1:5:2.99:30,3,0	./.	./.	./.	1/1:6,2:8:12:112,12,0	1/1:4,4:8:9.01:91,9,0	1/1:2,3:5:9.02:92,9,0	1/1:2,3:7:17.49:145,17,0	0/1:5,1:7:16.57:17,0,43	0/0:9,0:11:7.36:0,7,27	1/1:3,6:10:20.74:183,21,0	1/1:3,1:4:6:60,6,0	./.	1/1:18,4:23:16.71:144,17,0	1/1:1,1:2:3.01:31,3,0	1/1:5,1:6:2.63:30,3,0	1/1:6,4:10:11.76:103,12,0	1/1:7,3:11:14.76:133,15,0	0/0:9,0:10:2.50:0,2,9	1/1:2,2:4:9.01:91,9,0	./.
chr10	37384145	.	GGT	G	455.98	PASS	AB=0.918;AC=19;AF=0.380;AN=50;BaseQRankSum=5.769;DP=197;FS=26.919;HRun=0;HaplotypeScore=42.4441;InbreedingCoeff=-0.3232;MQ=78.96;MQ0=2;MQRankSum=-1.246;QD=3.14;ReadPosRankSum=7.818;VQSLOD=0.0528;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:8,1:9:25.01:67,0,25	0/0:2,0:2:2.98:0,3,21	0/0:12,0:9:19.18:0,19,190	0/1:9,0:9:1.70:2,0,104	0/0:2,0:2:5.96:0,6,44	0/1:9,0:9:24.86:25,0,56	0/1:9,1:10:38.31:38,0,60	0/1:10,0:10:7.61:8,0,159	0/0:4,0:4:5.87:0,6,35	0/0:2,0:2:3:0,3,27	./.	0/1:5,2:7:19.46:77,0,19	0/1:5,0:5:10.22:35,0,10	0/1:9,0:9:22.50:23,0,58	0/1:9,1:10:36:43,0,36	0/0:9,0:9:3.93:0,4,144	0/0:11,0:11:26.55:0,27,172	0/1:9,1:10:2.84:67,0,3	0/1:5,1:6:20.02:20,0,77	./.	0/1:23,1:23:27.47:27,0,90	1/1:1,0:1:2.74:12,3,0	0/1:3,2:5:19.25:26,0,19	0/1:10,0:10:23.04:23,0,31	1/1:5,1:6:9.43:63,9,0	0/0:10,0:10:12.38:0,12,90	0/1:4,1:5:23.09:45,0,23	./.
chr10	37386808	.	GC	G	1631.45	PASS	AB=0.900;AC=15;AF=0.300;AN=50;BaseQRankSum=-0.076;DP=335;FS=1.912;HRun=10;HaplotypeScore=45.9549;InbreedingCoeff=0.7439;MQ=85.32;MQ0=3;MQRankSum=1.080;QD=13.94;ReadPosRankSum=4.741;VQSLOD=3.3611;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,18:21:7.85:285,8,0	0/0:2,0:2:3.01:0,3,33	0/0:32,0:20:9.11:0,9,86	0/0:26,0:14:18.39:0,18,128	0/0:11,0:11:17.99:0,18,169	1/1:3,9:12:26.98:234,27,0	1/1:6,14:21:38.01:317,38,0	0/0:10,0:10:5.97:0,6,46	0/0:6,0:6:18.02:0,18,186	1/1:2,16:18:44.98:391,45,0	1/1:2,7:9:14.90:130,15,0	0/0:15,0:15:35.91:0,36,330	0/1:2,1:9:11.68:12,0,42	0/0:3,0:6:5.68:0,6,29	1/1:2,8:10:17.99:156,18,0	0/0:10,0:10:21.05:0,21,224	0/0:19,0:19:47.95:0,48,447	1/1:2,15:17:32.98:287,33,0	0/0:8,0:11:17.69:0,18,126	./.	0/0:10,0:12:14.36:0,14,96	./.	0/0:5,0:5:12.03:0,12,133	0/0:25,2:27:7.77:0,8,503	0/0:2,0:5:8.69:0,9,62	./.	0/0:4,0:8:5.81:0,6,47	0/0:3,0:4:5.82:0,6,35
chr10	37386868	.	TTG	T	2401.34	PASS	AB=0.867;AC=29;AF=0.558;AN=52;BaseQRankSum=-2.892;DP=382;FS=4.387;HRun=0;HaplotypeScore=76.9062;InbreedingCoeff=0.6906;MQ=54.85;MQ0=14;MQRankSum=2.664;QD=9.03;ReadPosRankSum=0.841;VQSLOD=3.0368;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:30,2:30:35.72:322,36,0	./.	0/0:10,0:5:0:0,0,0	./.	0/1:10,0:10:0:0,0,0	1/1:23,4:25:38.58:360,39,0	1/1:12,4:16:16.70:214,17,0	0/0:18,0:18:23.80:0,24,187	1/1:15,0:12:4.38:22,4,0	1/1:24,4:28:40.53:359,41,0	0/1:3,6:9:27.50:27,0,40	1/1:19,1:19:34.60:213,35,0	0/0:0,0:4:6:0,6,52	0/0:8,0:8:9:0,9,88	1/1:10,2:12:14.99:153,15,0	0/1:11,0:11:1.65:11,0,2	1/1:20,0:22:11.36:57,11,0	1/1:10,5:16:32.64:331,33,0	0/0:15,0:17:23.85:0,24,191	0/0:8,0:7:11.98:0,12,97	0/0:6,0:12:3:0,3,26	0/0:9,0:10:15:0,15,142	1/1:12,0:14:8.95:65,9,0	1/1:19,1:20:35.74:255,36,0	0/0:4,0:8:5.99:0,6,49	1/1:6,1:8:14.50:107,15,0	0/0:6,0:6:11.93:0,12,108	1/1:3,3:6:8.96:86,9,0
chr10	37386899	.	TGTGTGCGC	T	831.78	PASS	AB=0.943;AC=15;AF=0.278;AN=54;BaseQRankSum=-1.286;DP=380;FS=5.761;HRun=0;HaplotypeScore=120.8724;InbreedingCoeff=0.2006;MQ=51.39;MQ0=15;MQRankSum=-2.728;QD=4.50;ReadPosRankSum=-2.978;VQSLOD=1.3029;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:30:50.20:0,50,1013	0/0:3,0:2:0.47:0,0,1	0/0:4,0:2:2.56:0,3,31	./.	0/1:1,9:10:0.03:0,0,0	0/1:25,0:23:11.34:11,0,797	0/1:18,0:18:5.75:6,0,611	0/0:14,0:11:27.96:0,28,425	1/1:3,11:11:11.95:280,12,0	0/0:23,0:23:55.43:0,55,937	0/0:10,0:10:9.03:0,9,216	0/1:22,0:22:34.18:34,0,212	0/0:5,0:5:5.70:0,6,181	0/0:8,0:8:8.85:0,9,181	0/1:8,0:8:21.90:22,0,348	1/1:3,9:11:15.05:282,15,0	1/1:3,19:22:12.03:290,12,0	0/0:16,0:16:41.88:0,42,762	0/0:18,0:15:18.80:0,19,636	0/0:9,0:8:9.05:0,9,286	0/1:21,0:21:40.46:40,0,158	0/0:13,0:12:17.98:0,18,441	0/0:14,0:14:8.76:0,9,52	0/1:21,0:21:3.23:3,0,200	0/0:15,0:14:12.80:0,13,364	0/1:7,0:7:12.77:13,0,235	0/0:6,0:6:11.72:0,12,233	0/1:4,0:4:2.57:3,0,114
chr10	37386901	.	TGTGC	T	2308.98	PASS	AB=1.000;AC=33;AF=0.611;AN=54;BaseQRankSum=-1.858;DP=374;FS=4.632;HRun=0;HaplotypeScore=91.7669;InbreedingCoeff=-0.1416;MQ=51.75;MQ0=14;MQRankSum=0.082;QD=6.69;ReadPosRankSum=-1.787;VQSLOD=1.7553;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:32,0:32:7:7,0,266	1/1:3,0:2:2.99:24,3,0	1/1:3,0:1:2.99:23,3,0	./.	0/1:10,0:10:0:0,0,0	0/1:25,0:23:36.27:36,0,175	0/1:19,0:19:18.56:19,0,219	0/1:14,0:11:14.65:15,0,166	1/1:14,0:11:5.96:60,6,0	0/1:22,0:22:96.56:97,0,150	0/0:10,0:10:8.55:0,9,100	1/1:14,9:22:54.03:739,54,0	0/1:5,0:5:15.76:16,0,50	0/0:8,0:8:8.96:0,9,90	0/1:6,0:6:1.88:2,0,61	1/1:11,0:10:2.24:55,2,0	1/1:21,0:21:11.86:100,12,0	0/1:16,0:16:15.91:16,0,126	0/1:17,0:14:27.09:27,0,192	0/1:9,0:8:9.76:10,0,99	1/1:21,0:21:7.54:236,8,0	0/1:13,0:12:28.50:29,0,144	1/1:2,12:14:9.03:178,9,0	1/1:13,8:21:50.94:711,51,0	0/1:14,0:14:53.32:53,0,77	0/1:7,0:7:8.10:8,0,124	0/0:6,0:6:11.49:0,11,146	0/1:4,0:4:6.58:7,0,39
chr10	37387014	.	C	CTG	523.45	PASS	AB=0.865;AC=5;AF=0.089;AN=56;BaseQRankSum=2.848;DP=565;FS=0.829;HRun=0;HaplotypeScore=78.1798;InbreedingCoeff=-0.1087;MQ=49.93;MQ0=61;MQRankSum=-3.717;QD=5.08;ReadPosRankSum=-2.635;VQSLOD=2.2917;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:33:96.16:0,96,1241	0/0:6,0:4:12.04:0,12,157	0/0:39,0:9:8.96:0,9,82	0/0:40,0:4:5.98:0,6,53	0/0:19,0:19:39.13:0,39,513	0/0:20,1:21:4.21:0,4,616	0/0:15,0:14:30.10:0,30,394	0/0:19,0:13:30.07:0,30,366	0/0:20,0:20:51.13:0,51,638	0/1:15,0:15:5.26:5,0,432	0/0:9,0:7:15.05:0,15,197	0/1:20,10:30:99:376,0,575	0/0:11,0:11:27.09:0,27,355	0/0:13,0:13:27.06:0,27,337	0/0:11,1:12:23.73:0,24,298	0/0:19,0:18:36.10:0,36,450	0/0:16,0:16:20.94:0,21,561	0/0:19,0:19:54.18:0,54,709	0/0:17,0:6:18.06:0,18,237	0/0:11,0:10:24.06:0,24,300	0/0:68,0:66:99:0,169,2163	0/0:7,0:6:11.95:0,12,135	0/1:11,1:11:29.07:29,0,250	0/1:24,9:34:99:213,0,598	0/0:14,0:14:16.77:0,17,378	0/0:21,0:19:39.13:0,39,513	0/1:10,0:9:10.74:11,0,325	0/0:11,0:11:27.07:0,27,338
chr10	37387634	.	A	AGTGCATGCGTGC	4926.09	PASS	AB=0.958;AC=14;AF=0.250;AN=56;BaseQRankSum=3.260;DP=570;FS=7.863;HRun=0;HaplotypeScore=204.5083;InbreedingCoeff=0.1984;MQ=71.14;MQ0=0;MQRankSum=-8.205;QD=20.53;ReadPosRankSum=-0.359;VQSLOD=2.4028;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:36,0:36:73.28:73,0,356	0/0:8,0:8:18.04:0,18,526	0/0:19,0:13:26.75:0,27,292	0/0:22,0:22:52.70:0,53,632	0/0:6,0:11:22.91:0,23,136	0/1:18,0:17:70.22:70,0,152	0/1:45,0:45:99:556,0,243	0/0:20,0:20:47.82:0,48,506	0/0:6,0:19:39.07:0,39,194	0/1:11,0:11:56.71:302,0,57	0/1:4,0:4:35.96:56,0,36	1/1:9,16:31:23.74:1432,24,0	0/0:23,0:23:63.13:0,63,1777	0/0:22,0:23:53.95:0,54,1192	0/1:8,0:8:14.97:274,0,15	0/0:7,0:22:45.11:0,45,254	0/0:14,0:34:77.23:0,77,540	0/1:29,0:29:99:1189,0,169	0/0:17,0:17:47.20:0,47,990	0/0:14,0:14:41.15:0,41,1245	0/0:48,0:48:99:0,129,2869	0/0:16,0:16:45.13:0,45,1534	1/1:2,10:14:9.03:547,9,0	1/1:6,19:31:6.01:365,6,0	0/0:8,0:8:24.05:0,24,701	0/1:6,0:12:62.53:63,0,98	0/0:12,0:12:35.97:0,36,803	0/0:5,0:13:27.60:0,28,158
chr10	37388737	.	AAGAAAGAGAGAGAGAGAG	A	2307.56	PASS	AB=1.000;AC=10;AF=0.179;AN=56;BaseQRankSum=2.765;DP=538;FS=8.012;HRun=0;HaplotypeScore=218.6342;InbreedingCoeff=0.7097;MQ=56.19;MQ0=7;MQRankSum=-2.758;QD=18.61;ReadPosRankSum=1.974;VQSLOD=1.7029;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:29:69.51:0,70,1064	0/0:7,0:7:17.90:0,18,300	0/0:18,0:4:8.98:0,9,81	0/0:26,0:14:9.06:0,9,133	1/1:2,18:20:17.86:293,18,0	0/0:22,0:22:57.10:0,57,1819	0/0:31,0:31:83.93:0,84,1985	0/0:20,0:20:57.09:0,57,1149	1/1:1,23:25:21.07:852,21,0	0/0:20,0:19:57.15:0,57,2301	0/0:13,0:13:30.06:0,30,1012	0/0:16,0:16:29.18:0,29,687	0/0:23,0:23:60.15:0,60,1539	0/0:15,0:15:27.03:0,27,504	0/0:15,0:14:33.47:0,33,521	1/1:0,25:25:14.67:610,15,0	1/1:0,30:30:15:519,15,0	0/0:17,0:17:45.06:0,45,1293	0/0:14,0:14:27.02:0,27,1116	0/0:11,0:11:24.89:0,25,385	0/0:23,0:24:46.45:0,46,1592	0/0:12,0:12:20.97:0,21,422	0/0:18,0:18:13.44:0,13,1165	0/0:29,0:29:59.90:0,60,884	0/0:10,0:10:13.27:0,13,232	0/1:15,0:15:65.57:66,0,907	0/0:21,0:21:45.10:0,45,1180	0/1:9,0:9:68.75:134,0,69
chr10	37388741	.	A	AAGAGAGAG	4264.44	PASS	AB=0.981;AC=46;AF=0.852;AN=54;BaseQRankSum=-5.004;DP=544;FS=2.801;HRun=0;HaplotypeScore=150.1365;InbreedingCoeff=0.4153;MQ=55.71;MQ0=7;MQRankSum=3.148;QD=9.03;ReadPosRankSum=-1.949;VQSLOD=3.7813;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:30:24.08:404,24,0	1/1:6,0:7:3.01:33,3,0	./.	0/1:25,0:13:0:0,0,0	0/1:20,0:20:0:0,0,0	1/1:20,0:21:14.83:180,15,0	1/1:31,0:33:20.73:156,21,0	1/1:20,0:20:7.75:45,8,0	0/0:25,0:25:13.26:0,13,183	1/1:22,0:22:30.78:256,31,0	0/1:11,0:12:0.06:39,0,0	1/1:15,0:15:6.02:200,6,0	1/1:24,0:24:33.09:574,33,0	1/1:7,7:17:6.02:185,6,0	1/1:11,0:14:11.66:197,12,0	0/1:25,0:25:7.28:7,0,90	0/0:30,0:30:9.03:0,9,147	1/1:13,0:16:13.25:182,13,0	1/1:5,0:9:18.04:256,18,0	1/1:11,0:11:3.01:57,3,0	1/1:24,0:24:18.06:297,18,0	1/1:6,8:17:3.01:84,3,0	1/1:20,0:20:18.04:269,18,0	1/1:29,0:29:6:108,6,0	1/1:9,0:9:3.01:36,3,0	1/1:12,0:17:20.88:220,21,0	1/1:20,0:20:23.88:457,24,0	1/1:10,0:10:2.98:22,3,0
chr10	37388774	.	A	AGAGAGAGAGC	2338.29	PASS	AB=1.000;AC=24;AF=0.429;AN=56;BaseQRankSum=3.832;DP=638;FS=5.104;HRun=0;HaplotypeScore=197.4271;InbreedingCoeff=-0.3250;MQ=57.54;MQ0=26;MQRankSum=-1.914;QD=4.81;ReadPosRankSum=0.832;VQSLOD=2.5212;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:37,0:33:17.83:233,0,18	0/1:10,0:9:3.89:4,0,122	0/1:43,0:16:14.19:14,0,173	0/1:59,0:21:37.88:38,0,189	0/0:24,0:23:29.33:0,29,210	0/1:18,0:18:99:123,0,139	0/1:29,0:29:68.62:69,0,107	0/0:21,0:19:14.34:0,14,237	0/0:20,0:20:24.98:0,25,336	0/1:23,0:23:99:147,0,254	0/0:12,0:12:4.18:0,4,46	1/1:4,13:22:6.02:308,6,0	0/1:24,0:24:99:244,0,142	0/1:14,0:14:99:121,0,125	0/1:21,0:19:7.63:87,0,8	0/0:23,0:23:16.74:0,17,269	0/0:39,0:39:41.52:0,42,421	0/1:11,0:10:65.90:102,0,66	0/1:19,0:19:55.69:56,0,266	0/1:11,0:11:19.51:20,0,93	0/1:29,0:29:99:122,0,238	0/1:20,0:20:15.99:16,0,155	1/1:17,0:17:24.02:393,24,0	1/1:10,12:26:10.10:129,10,0	0/0:13,0:13:5.76:0,6,80	0/1:21,0:20:99:118,0,220	0/1:25,0:25:99:155,0,209	0/1:7,0:7:7.08:7,0,78
chr10	37388802	.	AGGGAG	A	2307.89	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=8.337;DP=647;FS=5.539;HRun=0;HaplotypeScore=161.1877;InbreedingCoeff=0.9199;MQ=70.17;MQ0=15;MQRankSum=-7.340;QD=17.48;ReadPosRankSum=0.585;VQSLOD=3.2457;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:15,19:31:21.07:356,21,0	0/0:9,0:9:24.04:0,24,509	0/0:65,0:33:30.30:0,30,417	0/0:85,0:44:7.01:0,7,339	0/0:19,0:19:24.06:0,24,614	1/1:6,6:12:12.04:228,12,0	1/1:9,14:23:17.86:340,18,0	0/0:22,0:22:47.49:0,47,931	0/0:20,0:20:39.13:0,39,1014	1/1:9,17:25:41.93:740,42,0	1/1:5,5:10:15.05:264,15,0	0/0:22,0:22:24.08:0,24,642	0/0:25,0:25:57.20:0,57,1543	0/0:23,0:23:48.16:0,48,1262	1/1:2,16:18:26.69:512,27,0	0/0:28,0:28:54.17:0,54,1338	0/0:30,0:30:42.14:0,42,1070	1/1:4,5:9:3.01:57,3,0	0/0:15,0:15:27.05:0,27,579	0/0:10,0:10:21.07:0,21,554	0/0:34,0:34:72.23:0,72,1850	0/0:15,0:15:26.59:0,27,696	0/0:14,0:14:36.11:0,36,941	0/0:22,0:22:26.70:0,27,742	0/0:10,0:10:24.08:0,24,669	0/0:17,0:17:7.12:0,7,714	0/0:22,0:22:42.14:0,42,1180	0/0:6,0:6:15.02:0,15,308
chr10	37389515	.	A	AG	1785.70	PASS	AB=0.762;AC=25;AF=0.446;AN=56;BaseQRankSum=-5.415;DP=496;FS=9.343;HRun=11;HaplotypeScore=88.3540;InbreedingCoeff=0.1147;MQ=69.46;MQ0=1;MQRankSum=0.827;QD=5.56;ReadPosRankSum=-1.617;VQSLOD=1.0827;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:16,9:26:16.38:102,0,16	1/1:3,3:7:2.97:20,3,0	0/1:16,0:15:3.61:4,0,23	0/0:9,0:9:0.16:0,0,18	0/0:4,0:22:30.54:0,31,89	0/1:11,6:18:5.36:118,0,5	0/1:7,9:18:17.39:170,0,17	0/1:14,6:20:29.85:76,0,30	0/0:4,0:18:26.47:0,26,77	0/1:8,6:13:11.81:12,0,17	1/1:4,4:8:8.95:79,9,0	0/0:15,0:15:26.86:0,27,205	0/1:13,6:19:15.36:24,0,15	1/1:8,9:18:24:232,24,0	0/1:11,12:24:5.10:134,0,5	0/0:4,0:19:30.55:0,31,90	0/0:1,0:28:50.93:0,51,149	1/1:5,25:30:44.80:591,45,0	0/1:7,3:11:8.31:78,0,8	1/1:8,5:13:9.02:91,9,0	0/1:14,11:25:10.09:151,0,10	0/1:7,1:8:0:0,0,0	0/1:13,0:13:1.22:1,0,72	0/0:32,0:32:62.46:0,62,468	1/1:9,4:13:1.25:3,1,0	0/0:17,0:17:25.58:0,26,180	0/1:8,11:19:31.48:67,0,31	0/0:14,0:14:26.84:0,27,204
chr10	37389668	.	T	TA	1118.03	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-6.646;DP=579;FS=0.000;HRun=7;HaplotypeScore=58.3606;InbreedingCoeff=0.9783;MQ=67.34;MQ0=1;MQRankSum=-1.017;QD=30.22;ReadPosRankSum=-0.071;VQSLOD=3.8419;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,105,1014	0/0:5,0:5:15.01:0,15,139	0/0:18,0:18:14.14:0,14,243	0/0:13,0:12:19.88:0,20,160	0/0:23,0:23:60.10:0,60,579	0/0:24,0:24:63.10:0,63,608	0/0:18,0:18:42.06:0,42,406	0/0:33,0:33:87.10:0,87,826	0/0:19,0:19:48.06:0,48,457	0/0:17,0:17:39.05:0,39,377	0/0:13,0:13:36.06:0,36,347	0/0:16,0:16:45.06:0,45,429	0/0:18,0:18:51.07:0,51,486	0/0:15,0:15:39.06:0,39,376	0/0:24,0:24:69.11:0,69,666	0/0:24,0:24:51.04:0,51,492	0/0:35,0:34:87.14:0,87,840	0/0:33,0:33:90.14:0,90,869	0/0:29,0:29:75.09:0,75,714	0/0:25,0:25:63.06:0,63,596	0/0:18,0:18:51.08:0,51,493	0/0:20,0:20:51.07:0,51,492	0/0:11,0:11:30.05:0,30,289	0/0:19,0:19:48.07:0,48,464	0/0:14,0:14:33.04:0,33,314	1/1:2,26:28:52.27:913,52,0	0/0:20,0:20:60.10:0,60,579	1/1:0,9:9:27.08:326,27,0
chr10	37390405	.	CTTCTTCTTCTTCTTCTTCTTA	C	434.13	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=5.182;DP=380;FS=1.272;HRun=0;HaplotypeScore=213.1121;InbreedingCoeff=0.2884;MQ=56.93;MQ0=5;MQRankSum=-2.758;QD=6.38;ReadPosRankSum=-0.514;VQSLOD=2.1275;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:45.13:0,45,2239	0/0:10,0:10:30.10:0,30,1121	0/0:10,0:7:17.83:0,18,303	0/0:4,0:4:0.68:0,1,266	0/0:12,0:12:12.04:0,12,169	0/0:12,0:12:36.11:0,36,1405	0/0:3,0:3:9.03:0,9,333	0/0:50,0:45:99:0,119,4445	1/1:9,0:9:3.01:140,3,0	0/0:15,0:15:44.50:0,45,2310	0/0:9,0:9:27.04:0,27,1130	0/0:14,0:13:39.13:0,39,2248	0/0:11,0:11:33.11:0,33,1174	0/0:11,0:11:33.11:0,33,1553	0/0:14,0:14:39.12:0,39,1660	1/1:0,8:8:3.01:176,3,0	0/1:20,0:20:26.76:27,0,39	0/0:21,0:21:60.21:0,60,2999	0/0:16,0:16:48.16:0,48,2129	0/0:11,0:10:24.07:0,24,1164	0/0:16,0:16:45.15:0,45,1515	0/0:8,0:8:21.06:0,21,690	0/0:4,0:4:12.04:0,12,464	0/0:17,0:16:45.15:0,45,2204	0/0:18,0:17:48.16:0,48,2783	0/1:18,0:18:83.70:84,0,1476	0/0:10,0:10:30.06:0,30,1172	0/1:13,0:12:99:130,0,1072
chr10	37390408	.	CTTCTTCTTCTTCTTCTTATTATTA	C	338.39	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=4.928;DP=371;FS=0.000;HRun=0;HaplotypeScore=228.1388;InbreedingCoeff=0.3043;MQ=53.51;MQ0=6;MQRankSum=-3.553;QD=5.13;ReadPosRankSum=0.625;VQSLOD=1.9600;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:42.14:0,42,1999	0/0:10,0:10:30.09:0,30,1086	0/0:8,0:5:8.96:0,9,173	0/0:4,0:4:6:0,6,177	0/0:12,0:12:11.81:0,12,85	0/0:13,0:13:36.11:0,36,1514	0/0:3,0:3:9.03:0,9,273	0/0:52,0:44:99:0,116,3473	1/1:0,9:9:3.01:197,3,0	0/0:14,0:14:40.95:0,41,2046	0/0:9,0:9:18.06:0,18,971	0/0:14,0:13:39.13:0,39,2120	0/0:11,0:11:33.10:0,33,1017	0/0:11,0:11:33.11:0,33,1445	0/0:13,0:13:36.12:0,36,1416	1/1:8,0:8:3.01:101,3,0	0/1:21,0:21:16.15:44,0,16	0/0:21,0:21:63.22:0,63,2811	0/0:16,0:16:48.16:0,48,1842	0/0:10,0:9:21.07:0,21,1051	0/0:16,0:16:48.08:0,48,1312	0/0:7,0:7:18.05:0,18,592	0/0:4,0:4:12.01:0,12,432	0/0:17,0:16:45.15:0,45,1947	0/0:18,0:17:48.16:0,48,2667	0/1:16,0:16:52.32:52,0,1320	0/0:8,0:8:24.08:0,24,1078	0/1:12,0:11:66.53:67,0,965
chr10	37390411	.	CTTCTTCTTCTTCTTATTATTATTA	C	500.64	PASS	AB=1.000;AC=10;AF=0.179;AN=56;BaseQRankSum=5.243;DP=361;FS=4.252;HRun=0;HaplotypeScore=223.2067;InbreedingCoeff=0.4755;MQ=52.14;MQ0=6;MQRankSum=-2.541;QD=6.42;ReadPosRankSum=-0.797;VQSLOD=2.6326;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:39.96:0,40,1830	0/0:10,0:10:27.09:0,27,883	0/0:6,0:3:3.01:0,3,95	0/0:3,0:3:3.01:0,3,110	1/1:3,10:13:5.87:35,6,0	0/0:12,0:12:33.11:0,33,1353	0/0:3,0:3:9.02:0,9,198	0/0:50,0:42:99:0,106,2538	1/1:9,0:9:3.01:179,3,0	0/0:13,0:13:39.13:0,39,1723	0/0:6,0:6:18.06:0,18,846	0/0:15,0:14:42.14:0,42,2029	0/0:10,0:10:30.07:0,30,796	0/0:11,0:11:33.11:0,33,1268	0/0:14,0:14:42.13:0,42,1353	1/1:8,0:8:3.01:83,3,0	1/1:3,17:20:2.92:68,3,0	0/0:21,0:21:63.19:0,63,2474	0/0:16,0:16:48.05:0,48,1482	0/0:9,0:8:21.06:0,21,910	0/0:16,0:16:42.12:0,42,973	0/0:6,0:6:15.04:0,15,458	0/0:4,0:4:6.02:0,6,360	0/0:17,0:16:45.09:0,45,1668	0/0:18,0:17:48.16:0,48,2363	0/1:16,0:16:99:149,0,1054	0/0:8,0:8:24.08:0,24,939	0/1:12,0:11:99:122,0,779
chr10	37390423	.	CTTATTATTATTATTATTATTA	C	1369.05	PASS	AC=8;AF=0.154;AN=52;BaseQRankSum=2.298;DP=310;FS=1.181;HRun=0;HaplotypeScore=181.9810;InbreedingCoeff=0.4992;MQ=45.90;MQ0=8;MQRankSum=-1.020;QD=29.76;ReadPosRankSum=-0.661;VQSLOD=2.3744;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:24.01:0,24,898	0/0:8,0:8:3.01:0,3,60	./.	./.	0/0:10,0:10:6.02:0,6,70	0/0:13,0:13:27.09:0,27,1268	0/0:2,0:2:6.02:0,6,223	0/0:38,0:28:3.01:0,3,40	1/1:9,0:9:3.01:84,3,0	0/0:12,0:13:9.03:0,9,465	0/0:6,0:6:6.02:0,6,376	0/0:12,0:11:12.04:0,12,1050	0/0:8,0:8:6.02:0,6,95	0/0:10,0:10:15.05:0,15,410	0/0:11,0:11:12.04:0,12,555	1/1:8,0:8:3.01:69,3,0	0/0:20,0:20:3.01:0,3,53	0/0:19,0:20:30.09:0,30,1138	0/0:14,0:14:14.97:0,15,337	0/0:7,0:6:9.03:0,9,430	0/0:11,0:11:3.01:0,3,70	0/0:4,0:4:3.01:0,3,35	0/0:2,0:2:3.01:0,3,220	0/0:16,0:15:12.04:0,12,711	0/0:16,0:15:24.08:0,24,1084	1/1:9,8:17:24.07:845,24,0	0/0:7,0:7:6.02:0,6,340	1/1:9,3:10:9.03:501,9,0
chr10	37391778	.	CTT	C	5676.60	PASS	AB=0.567;AC=35;AF=0.625;AN=56;BaseQRankSum=-12.584;DP=497;FS=5.653;HRun=13;HaplotypeScore=73.0166;InbreedingCoeff=0.8557;MQ=69.56;MQ0=3;MQRankSum=-0.847;QD=18.99;ReadPosRankSum=1.757;VQSLOD=4.2872;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:8,1:40:40.27:0,40,254	1/1:1,6:7:15:145,15,0	0/0:15,0:8:11.96:0,12,110	0/0:14,0:9:8.50:0,9,74	1/1:3,22:27:71.54:655,72,0	0/0:4,1:25:21.83:0,22,168	0/0:3,1:17:24.95:0,25,86	1/1:3,17:20:47.99:456,48,0	1/1:1,12:13:24.03:233,24,0	0/0:6,0:19:30.71:0,31,106	0/0:5,1:17:1.59:0,2,70	1/1:1,21:22:60.09:582,60,0	1/1:1,11:13:29.78:274,30,0	1/1:3,14:18:35.78:332,36,0	0/0:9,0:24:46.96:0,47,270	1/1:6,18:24:45:436,45,0	1/1:4,18:23:51.05:495,51,0	0/1:4,2:17:25.42:25,0,58	1/1:3,10:14:23.95:282,24,0	1/1:4,10:15:29.63:273,30,0	1/1:5,9:14:20.99:204,21,0	1/1:3,8:12:11.77:152,12,0	1/1:2,10:12:26.75:245,27,0	1/1:4,13:18:26.71:294,27,0	1/1:2,12:15:35.79:332,36,0	0/0:5,0:22:42.45:0,42,157	1/1:3,10:13:27.02:262,27,0	0/0:2,0:5:7.49:0,7,26
chr10	37392539	.	CTCCTCTTCT	C	1592.59	PASS	AB=0.953;AC=17;AF=0.304;AN=56;BaseQRankSum=-1.588;DP=322;FS=27.876;HRun=0;HaplotypeScore=107.2394;InbreedingCoeff=-0.3089;MQ=48.37;MQ0=42;MQRankSum=0.455;QD=7.88;ReadPosRankSum=-1.931;VQSLOD=0.3935;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:19,0:17:38.42:412,0,38	0/0:4,0:3:6.02:0,6,116	0/0:10,0:3:5.17:0,5,26	0/1:7,0:5:0.98:1,0,12	0/1:12,0:8:86.67:87,0,94	0/1:5,5:9:11.11:109,0,11	0/1:11,0:11:43.66:44,0,78	0/0:18,0:13:16.35:0,16,236	0/1:22,0:21:99:231,0,204	0/1:11,0:11:55.79:252,0,56	1/1:3,0:3:2.84:53,3,0	0/1:8,0:4:23.78:24,0,68	0/0:10,0:8:10.86:0,11,139	0/0:4,0:3:0:0,0,0	0/1:15,0:11:99:112,0,105	0/1:24,0:22:16.06:16,0,316	0/1:20,0:17:87.53:88,0,199	0/1:7,0:4:17.65:63,0,18	0/0:13,0:7:13.64:0,14,144	0/0:4,0:3:1.25:0,1,3	0/0:24,0:21:14.23:0,14,170	0/0:6,0:6:2.03:0,2,68	0/1:2,3:4:13.95:14,0,19	0/1:11,0:10:7.44:138,0,7	0/0:11,0:9:5.96:0,6,85	0/1:17,0:14:96.62:97,0,257	0/0:6,0:5:10.55:0,11,59	0/0:10,0:7:6.89:0,7,45
chr10	37392542	.	CTCTTCT	C	2368.97	PASS	AB=1.000;AC=26;AF=0.520;AN=50;BaseQRankSum=0.481;DP=306;FS=3.377;HRun=0;HaplotypeScore=89.3866;InbreedingCoeff=0.3905;MQ=46.39;MQ0=38;MQRankSum=-0.651;QD=12.27;ReadPosRankSum=0.758;VQSLOD=2.4824;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:17:7.18:447,7,0	0/0:5,0:4:2.46:0,2,37	./.	./.	1/1:11,0:8:13.58:159,14,0	1/1:10,0:9:3.01:51,3,0	1/1:11,0:11:6.02:89,6,0	0/0:18,0:12:8.45:0,8,128	1/1:22,0:21:48.62:491,49,0	1/1:4,6:10:17.73:269,18,0	1/1:2,0:2:3.01:54,3,0	0/1:8,0:4:16.05:30,0,16	0/1:10,0:8:1.07:1,0,33	0/0:4,0:3:0:0,0,0	1/1:14,1:11:11.71:137,12,0	1/1:23,0:21:45.18:318,45,0	1/1:18,0:15:21.41:162,21,0	0/1:6,0:4:4.23:48,0,4	0/0:11,0:7:6.46:0,6,61	0/0:4,0:3:1.25:0,1,3	0/0:22,0:20:5.98:0,6,55	0/0:7,0:7:1.55:0,2,44	./.	1/1:11,0:10:13.55:181,14,0	0/0:9,0:8:2.17:0,2,23	0/1:16,0:14:82.90:83,0,126	0/0:6,0:5:4.46:0,4,16	0/0:9,0:6:0.47:0,0,1
chr10	37392544	.	CTT	C	1067.82	PASS	AB=1.000;AC=27;AF=0.500;AN=54;BaseQRankSum=4.584;DP=279;FS=6.882;HRun=2;HaplotypeScore=72.7170;InbreedingCoeff=0.2124;MQ=47.10;MQ0=36;MQRankSum=0.299;QD=4.99;ReadPosRankSum=2.619;VQSLOD=-0.4916;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:18,0:16:3.28:98,0,3	0/0:5,0:4:11.39:0,11,75	0/0:5,0:1:3.01:0,3,39	0/0:4,0:2:6:0,6,53	1/1:10,1:8:11.56:91,12,0	1/1:9,0:9:0.25:10,0,0	0/1:10,0:10:25.40:25,0,44	0/0:16,0:10:23.46:0,23,242	1/1:16,5:20:28.09:194,28,0	1/1:8,0:8:17.88:92,18,0	1/1:2,0:2:2.88:15,3,0	1/1:8,0:4:2.68:36,3,0	0/0:9,0:7:18.22:0,18,138	./.	0/1:13,0:9:51.23:51,0,53	1/1:9,12:19:9.28:320,9,0	1/1:11,6:15:5.06:152,5,0	0/1:6,0:4:4.03:4,0,39	0/1:13,0:7:2.77:3,0,95	0/0:5,0:4:8.47:0,8,41	0/1:19,0:17:14.74:15,0,168	0/0:6,0:6:8.49:0,8,53	0/0:3,0:3:2.92:0,3,17	1/1:9,0:8:13.78:70,14,0	0/0:9,0:8:16.75:0,17,79	0/1:15,0:12:33.86:34,0,93	0/1:6,0:5:10.92:11,0,27	0/1:8,0:5:8.04:17,0,8
chr10	37395563	.	TTG	T	5948.30	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=10.967;DP=676;FS=2.947;HRun=0;HaplotypeScore=117.3599;InbreedingCoeff=0.9491;MQ=61.10;MQ0=5;MQRankSum=-0.234;QD=23.60;ReadPosRankSum=-0.937;VQSLOD=5.4847;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:57.25:0,57,1192	1/1:9,9:18:45.03:521,45,0	0/0:23,0:13:7.03:0,7,220	0/0:27,0:16:20.07:0,20,233	0/0:34,0:34:81.26:0,81,1249	0/0:17,0:17:4.95:0,5,471	0/0:16,0:16:30.09:0,30,460	1/1:23,6:29:4.48:443,4,0	0/0:20,0:20:33.11:0,33,518	0/0:28,0:28:68.57:0,69,987	0/0:20,0:20:48.15:0,48,741	0/0:23,0:23:47.21:0,47,348	1/1:10,10:20:48.06:546,48,0	1/1:10,10:20:45.13:530,45,0	0/0:24,0:25:51.17:0,51,797	0/0:23,0:23:51.16:0,51,775	0/0:37,0:37:80.92:0,81,1188	0/0:25,0:25:59.76:0,60,806	1/1:3,13:16:36.09:416,36,0	1/1:15,14:28:56.97:624,57,0	1/1:13,8:21:35.73:384,36,0	1/1:9,10:19:38.98:432,39,0	0/0:30,0:30:62.76:0,63,502	0/0:34,1:35:27.20:0,27,364	1/1:7,9:16:44.96:500,45,0	1/1:12,9:20:45.13:533,45,0	1/1:14,18:32:71.94:802,72,0	1/1:8,3:11:18.06:217,18,0
chr10	37395581	.	ATG	A	6852.59	PASS	AB=0.925;AC=32;AF=0.571;AN=56;BaseQRankSum=15.397;DP=677;FS=1.558;HRun=0;HaplotypeScore=117.7676;InbreedingCoeff=0.8366;MQ=59.67;MQ0=6;MQRankSum=-1.185;QD=16.80;ReadPosRankSum=3.708;VQSLOD=4.6131;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:41,3:43:47.42:47,0,1215	1/1:6,11:17:32.68:354,33,0	0/0:31,0:17:21.19:0,21,339	0/0:35,0:16:7.84:0,8,212	0/0:28,0:28:69.21:0,69,1072	0/1:19,2:21:25.21:25,0,520	0/0:16,0:16:40.35:0,40,568	1/1:11,17:28:54.10:609,54,0	0/0:12,0:12:21.07:0,21,338	0/0:21,0:21:57.14:0,57,854	0/0:21,0:21:42.14:0,42,668	1/1:5,19:25:44.76:527,45,0	1/1:4,14:19:41.79:431,42,0	1/1:4,16:20:36.07:415,36,0	0/0:23,0:23:60.16:0,60,870	0/0:22,0:22:48.16:0,48,757	0/0:33,1:33:23.56:0,24,870	0/0:24,2:26:17.48:0,17,714	1/1:14,5:20:41.62:425,42,0	1/1:6,25:31:51.10:572,51,0	1/1:3,19:22:26.88:310,27,0	1/1:3,16:21:35.46:346,35,0	1/1:7,22:29:41.84:512,42,0	1/1:6,35:41:57.13:675,57,0	1/1:3,11:14:33.09:378,33,0	1/1:8,11:19:38.85:418,39,0	1/1:3,26:30:59.69:681,60,0	1/1:3,3:6:12:126,12,0
chr10	37397424	.	AT	A	6541.02	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=14.371;DP=648;FS=1.765;HRun=6;HaplotypeScore=63.8096;InbreedingCoeff=0.9975;MQ=82.79;MQ0=0;MQRankSum=-0.921;QD=29.46;ReadPosRankSum=0.496;VQSLOD=5.4936;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,99,1288	1/1:0,5:5:15.04:161,15,0	0/0:12,0:12:27.09:0,27,344	0/0:23,0:23:51:0,51,575	0/0:18,0:18:54.16:0,54,695	0/0:14,0:14:39.11:0,39,491	0/0:34,0:34:96.30:0,96,1250	1/1:7,30:37:90.17:941,90,0	0/0:29,0:29:81.25:0,81,1049	0/0:27,0:27:75.24:0,75,975	0/0:21,0:21:63.19:0,63,813	0/0:23,0:23:69.16:0,69,882	1/1:0,20:20:54.14:580,54,0	1/1:1,20:21:60.01:642,60,0	0/0:27,0:27:75.24:0,75,987	0/0:29,0:29:87.27:0,87,1129	0/0:21,0:21:60.20:0,60,790	0/0:22,0:22:63.14:0,63,779	1/1:2,20:22:60.15:643,60,0	1/1:0,15:15:45.11:484,45,0	1/1:2,35:37:99:1096,102,0	1/1:0,17:17:48.12:516,48,0	0/0:21,0:21:63.18:0,63,797	0/0:34,0:34:90.29:0,90,1176	1/1:0,19:19:57.14:612,57,0	0/0:17,0:17:51.16:0,51,657	1/1:1,28:29:81.20:866,81,0	0/0:16,0:16:48.16:0,48,631
chr10	37398178	.	CT	C	3521.16	PASS	AB=0.773;AC=27;AF=0.482;AN=56;BaseQRankSum=-9.179;DP=614;FS=2.574;HRun=13;HaplotypeScore=92.8533;InbreedingCoeff=0.5724;MQ=74.95;MQ0=0;MQRankSum=0.718;QD=10.00;ReadPosRankSum=0.495;VQSLOD=3.2741;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:22,1:23:10.14:10,0,132	1/1:3,12:16:2.67:174,3,0	0/1:19,1:18:24.93:25,0,66	0/0:15,0:13:7.37:0,7,75	0/0:32,0:32:36.96:0,37,249	0/0:23,0:23:25.18:0,25,226	0/1:18,3:21:3.76:4,0,117	1/1:5,18:25:41.82:365,42,0	0/0:15,0:15:18.15:0,18,78	0/0:27,1:29:22.70:0,23,184	0/0:18,0:18:18.56:0,19,133	0/1:2,21:23:10.62:259,0,11	1/1:4,12:17:25.33:180,25,0	1/1:6,10:17:31.83:225,32,0	0/0:22,1:23:30.36:0,30,219	0/0:15,0:15:3.36:0,3,76	0/0:30,1:31:15.50:0,16,256	0/0:19,0:19:27.23:0,27,183	0/1:8,15:25:9.40:252,0,9	1/1:6,21:27:17.47:294,17,0	1/1:4,13:17:32.76:241,33,0	1/1:5,22:29:63.68:449,64,0	1/1:5,12:21:34.95:220,35,0	1/1:8,10:18:6.25:173,6,0	1/1:1,20:23:42.85:296,43,0	0/0:25,0:27:0.92:0,1,327	1/1:5,22:29:28.41:354,28,0	0/0:13,1:14:33.04:0,33,316
chr10	37398191	.	T	TA	2203.07	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-4.512;DP=653;FS=26.375;HRun=2;HaplotypeScore=99.5756;InbreedingCoeff=0.9979;MQ=73.53;MQ0=2;MQRankSum=-1.621;QD=8.67;ReadPosRankSum=1.329;VQSLOD=-0.1684;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:22:32.59:160,33,0	0/0:18,0:18:41.38:0,41,276	0/0:25,0:19:35.65:0,36,309	0/0:17,0:12:17.83:0,18,151	1/1:32,0:32:50.61:292,51,0	1/1:25,0:25:40.61:231,41,0	1/1:21,0:21:42.22:205,42,0	0/0:29,0:29:76.44:0,76,520	1/1:11,0:11:23.14:151,23,0	1/1:31,0:31:45.67:387,46,0	1/1:19,0:19:35.35:243,35,0	0/0:28,0:28:62.19:0,62,449	0/0:19,0:19:44.43:0,44,306	0/0:14,0:14:41.36:0,41,273	1/1:25,1:26:42.71:253,43,0	1/1:15,1:16:25.24:157,25,0	1/1:29,2:31:44.49:241,44,0	1/1:20,0:20:27.36:110,27,0	0/0:26,0:26:74.16:0,74,550	0/0:37,0:37:94.86:0,95,680	0/0:17,0:17:44.30:0,44,293	0/0:28,0:28:82.55:0,83,523	0/0:20,0:20:49.56:0,50,309	0/0:15,0:15:41.45:0,41,283	0/0:25,0:25:53.13:0,53,346	0/0:30,0:30:49.70:0,50,639	0/0:36,0:34:85.79:0,86,583	0/0:15,0:15:41.77:0,42,401
chr10	37400346	.	A	AAGTCTAC	53818.34	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-4.613;DP=719;FS=11.491;HRun=0;HaplotypeScore=170.2767;InbreedingCoeff=0.9957;MQ=64.62;MQ0=0;MQRankSum=-9.524;QD=79.50;ReadPosRankSum=2.900;VQSLOD=5.0502;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,19:33:63.69:2382,64,0	1/1:0,8:12:30.10:1101,30,0	0/0:19,0:19:53:0,53,1145	0/0:23,0:23:30.64:0,31,837	1/1:1,19:22:37.03:1226,37,0	1/1:10,13:24:48.16:1837,48,0	1/1:7,23:35:75.26:3006,75,0	1/1:11,8:28:81.19:2503,81,0	1/1:3,20:29:66.23:2650,66,0	1/1:7,15:26:75.22:2602,75,0	1/1:3,7:10:21.07:776,21,0	1/1:7,27:43:81.28:3166,81,0	1/1:6,28:39:93.15:3573,93,0	1/1:4,33:46:99:4355,111,0	1/1:2,28:38:81.28:3254,81,0	1/1:6,22:33:78.27:3135,78,0	1/1:6,19:31:54.19:2076,54,0	1/1:4,11:22:33.11:1305,33,0	1/1:5,3:13:36.06:1016,36,0	1/1:0,10:14:30.10:1133,30,0	1/1:8,23:40:51.18:1768,51,0	1/1:3,17:23:54.18:2039,54,0	1/1:1,12:15:36.12:1329,36,0	1/1:4,20:32:39.07:1510,39,0	1/1:2,13:19:45.15:1648,45,0	1/1:3,13:18:48.16:1821,48,0	1/1:3,14:22:42.13:1655,42,0	1/1:0,8:8:24.08:953,24,0
chr10	37402166	.	G	GC	1790.72	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-5.706;DP=546;FS=2.592;HRun=4;HaplotypeScore=51.8528;InbreedingCoeff=0.9385;MQ=91.70;MQ0=0;MQRankSum=-3.424;QD=33.16;ReadPosRankSum=1.733;VQSLOD=4.2233;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,103,1148	0/0:8,0:8:18.05:0,18,204	0/0:24,0:24:59.21:0,59,682	0/0:20,0:20:29.38:0,29,450	0/0:8,0:8:24.07:0,24,272	0/0:19,0:19:57.16:0,57,645	0/0:29,0:29:81.23:0,81,915	0/0:13,0:13:39.11:0,39,442	0/0:19,0:19:54.14:0,54,603	0/0:30,0:30:78.22:0,78,879	0/0:11,0:11:33.09:0,33,370	1/1:1,22:23:60.20:821,60,0	0/0:21,0:21:60.14:0,60,655	0/0:24,0:24:69.20:0,69,779	0/0:13,0:13:39.10:0,39,432	0/0:15,0:15:42.12:0,42,476	0/0:38,0:38:99:0,105,1157	0/0:32,0:32:96.26:0,96,1078	0/0:12,0:12:34.34:0,34,374	0/0:24,0:24:72.20:0,72,813	0/0:33,0:33:96.22:0,96,1062	0/0:9,0:9:27.08:0,27,304	1/1:0,3:3:9.03:123,9,0	1/1:2,26:28:72.24:984,72,0	0/0:14,0:14:42.12:0,42,476	0/0:13,0:13:39.11:0,39,442	0/0:23,0:23:60.17:0,60,680	0/0:2,0:2:6.02:0,6,68
chr10	37404061	.	T	TACAC	11289.67	PASS	AB=0.594;AC=44;AF=0.786;AN=56;BaseQRankSum=-0.798;DP=604;FS=4.622;HRun=0;HaplotypeScore=113.3759;InbreedingCoeff=0.1481;MQ=65.97;MQ0=6;MQRankSum=1.841;QD=20.45;ReadPosRankSum=1.154;VQSLOD=4.5203;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,24:40:39.13:957,39,0	1/1:4,0:11:15.54:67,16,0	0/0:30,0:21:14.65:0,15,223	0/0:22,0:13:14.97:0,15,187	1/1:8,8:17:15.05:369,15,0	1/1:1,30:32:66.23:1621,66,0	1/1:4,14:20:17.80:381,18,0	0/1:15,0:29:8.27:153,0,8	1/1:3,15:18:36.33:817,36,0	1/1:6,15:22:48.11:1009,48,0	1/1:4,8:13:12.04:289,12,0	0/1:6,0:14:21.49:64,0,21	0/1:5,0:14:35.45:35,0,36	1/1:7,0:14:22.01:99,22,0	1/1:6,14:23:27.09:641,27,0	1/1:2,12:17:29.57:613,30,0	1/1:7,16:26:42.14:1002,42,0	1/1:3,18:23:48.16:1162,48,0	1/1:10,0:24:34.35:188,34,0	0/1:7,0:18:24.78:75,0,25	0/1:7,0:37:10.39:125,0,10	1/1:7,0:34:52.66:263,53,0	0/1:2,0:14:16.28:94,0,16	0/1:8,0:29:10.88:118,0,11	1/1:4,0:16:13.60:62,14,0	1/1:11,4:19:42.31:697,42,0	0/1:3,0:14:44.99:72,0,45	1/1:3,0:11:18.06:314,18,0
chr10	37405209	.	CTT	C	4712.67	PASS	AB=0.725;AC=47;AF=0.839;AN=56;BaseQRankSum=-5.780;DP=535;FS=18.642;HRun=15;HaplotypeScore=71.9493;InbreedingCoeff=0.4607;MQ=66.72;MQ0=5;MQRankSum=0.841;QD=10.16;ReadPosRankSum=5.000;VQSLOD=1.9247;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,24:37:26.03:406,26,0	1/1:5,1:7:2.72:66,3,0	0/0:25,0:10:4.54:0,5,23	0/0:24,2:11:4.91:0,5,21	1/1:10,15:26:30.72:281,31,0	1/1:7,19:27:32.22:319,32,0	1/1:9,10:19:17.56:143,18,0	1/1:11,13:23:32.06:266,32,0	1/1:4,8:12:14.70:116,15,0	1/1:10,16:27:23:353,23,0	0/1:5,9:16:10.75:35,0,11	1/1:4,8:12:0.43:22,0,0	1/1:3,13:16:12.44:106,12,0	0/1:4,10:13:0.84:114,0,1	1/1:9,4:13:22.89:181,23,0	1/1:9,15:24:8.31:167,8,0	1/1:4,19:24:12.90:289,13,0	1/1:9,10:16:26.13:214,26,0	1/1:14,11:23:12.43:218,12,0	1/1:5,11:17:22.40:210,22,0	1/1:2,8:10:19.55:161,20,0	1/1:0,9:10:17.82:198,18,0	1/1:5,10:15:16.34:135,16,0	1/1:10,20:30:28.40:283,28,0	1/1:4,9:13:32.93:281,33,0	0/0:20,0:20:16.55:0,17,104	1/1:8,10:20:5.23:141,5,0	0/1:5,0:5:6.74:7,0,22
chr10	37405210	.	T	TTC	231.20	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=0.147;DP=543;FS=7.249;HRun=0;HaplotypeScore=94.3467;InbreedingCoeff=0.6470;MQ=66.27;MQ0=7;MQRankSum=-2.890;QD=6.42;ReadPosRankSum=-5.476;VQSLOD=0.5583;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:71.31:0,71,690	0/1:7,0:7:4.19:4,0,100	0/0:27,0:10:1.52:0,2,80	0/0:26,0:11:14.91:0,15,111	0/0:26,0:26:60.02:0,60,559	0/0:27,0:27:50.58:0,51,515	0/0:20,0:19:29.67:0,30,305	0/0:25,0:24:31.85:0,32,344	0/0:12,0:12:14.46:0,14,156	0/0:27,0:27:54.95:0,55,541	0/0:16,0:16:21.54:0,22,212	0/0:12,0:12:10.57:0,11,89	0/0:17,0:17:21.01:0,21,200	0/0:14,0:13:18.03:0,18,179	0/0:14,0:14:32.37:0,32,313	0/0:23,0:22:16.53:0,17,292	0/0:24,0:24:48.04:0,48,472	0/0:19,0:16:29.36:0,29,311	0/0:24,0:22:59.20:0,59,514	0/0:17,0:17:44.47:0,44,369	0/0:10,0:10:11.15:0,11,162	0/0:10,0:10:18.58:0,19,217	0/0:15,0:15:19.59:0,20,215	0/0:30,0:30:43.13:0,43,417	0/0:14,0:14:37.30:0,37,355	1/1:8,12:22:15.82:275,16,0	0/0:20,0:20:39.32:0,39,342	1/1:3,3:7:5.88:62,6,0
chr10	37405971	.	CCTCCTGATGCT	C	15459.37	PASS	AB=0.960;AC=23;AF=0.411;AN=56;BaseQRankSum=17.262;DP=605;FS=4.052;HRun=0;HaplotypeScore=207.5602;InbreedingCoeff=0.9237;MQ=82.57;MQ0=0;MQRankSum=-16.726;QD=65.51;ReadPosRankSum=0.601;VQSLOD=4.7045;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,27:28:48.12:1612,48,0	0/0:11,0:11:30.10:0,30,1641	0/0:31,0:31:90.30:0,90,3779	0/0:21,0:19:44.45:0,44,1812	1/1:1,18:19:33.38:710,33,0	1/1:0,12:12:33.11:1153,33,0	1/1:0,30:30:69.19:2371,69,0	0/0:24,0:24:69.24:0,69,3364	1/1:0,18:18:45.15:1603,45,0	1/1:2,15:17:42.13:1243,42,0	1/1:0,8:8:15.02:449,15,0	0/0:30,0:30:90.31:0,90,4806	0/0:26,0:26:78.27:0,78,4203	0/0:24,0:24:72.25:0,72,3843	1/1:0,29:29:75.21:2544,75,0	1/1:0,15:15:36.12:1260,36,0	1/1:1,19:20:36.08:1196,36,0	1/1:1,15:16:36.12:1284,36,0	0/0:18,0:18:54.19:0,54,2693	0/0:15,0:15:42.14:0,42,2134	0/0:71,0:71:99:0,208,11201	0/0:21,0:21:63.20:0,63,3156	0/0:14,0:14:39.12:0,39,1977	0/0:20,0:20:60.21:0,60,3006	0/0:15,0:15:45.15:0,45,2593	0/1:23,1:24:34.81:35,0,3622	0/0:16,0:16:48.16:0,48,2655	0/0:12,0:12:36.12:0,36,2039
chr10	37408091	.	G	GA	1804.40	PASS	AB=0.761;AC=28;AF=0.500;AN=56;BaseQRankSum=-0.571;DP=588;FS=14.588;HRun=15;HaplotypeScore=76.5177;InbreedingCoeff=0.0970;MQ=62.45;MQ0=6;MQRankSum=-0.580;QD=4.44;ReadPosRankSum=-1.892;VQSLOD=-0.1827;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:34:27.58:0,28,231	1/1:2,8:11:23.82:190,24,0	1/1:21,0:9:5.52:33,6,0	0/1:23,0:11:14.31:14,0,16	0/1:16,6:22:25.76:64,0,26	0/1:24,3:27:31.75:32,0,166	0/0:18,0:19:24.54:0,25,137	1/1:12,19:34:46.25:297,46,0	0/1:15,0:15:7.42:92,0,7	0/0:20,0:19:2.02:0,2,130	0/0:31,1:33:11.61:0,12,170	0/0:13,0:13:16.29:0,16,96	0/1:6,7:14:2.46:19,0,2	1/1:2,11:14:3.44:57,3,0	0/0:16,0:17:6.82:0,7,123	1/1:4,0:12:2.84:14,3,0	0/1:12,29:41:14.80:140,0,15	0/0:21,0:23:18.77:0,19,171	0/1:17,2:20:49.55:143,0,50	0/1:12,9:21:4.48:91,0,4	0/1:7,15:22:7.01:153,0,7	1/1:5,13:19:2.81:122,3,0	0/1:13,3:17:32.51:33,0,110	0/0:22,0:21:39.73:0,40,217	1/1:3,3:7:5.99:50,6,0	1/1:17,16:33:24.51:339,25,0	0/1:11,11:22:3.11:75,0,3	0/1:2,5:7:12.01:19,0,12
chr10	37409671	.	C	CAG	2238.79	PASS	AB=0.571;AC=5;AF=0.089;AN=56;BaseQRankSum=-8.626;DP=626;FS=0.000;HRun=0;HaplotypeScore=84.6045;InbreedingCoeff=0.7763;MQ=79.76;MQ0=0;MQRankSum=-2.100;QD=33.41;ReadPosRankSum=3.878;VQSLOD=5.8655;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,108,1314	0/0:4,0:4:12.04:0,12,148	0/0:23,0:24:19.37:0,19,396	0/0:39,0:39:54.14:0,54,567	0/0:11,0:11:21.07:0,21,259	0/0:15,0:16:35.94:0,36,420	0/0:28,0:30:59.85:0,60,692	0/0:35,0:35:86.73:0,87,1011	0/0:25,0:26:57.01:0,57,678	0/0:14,0:14:39.12:0,39,480	0/0:13,0:13:24.08:0,24,295	1/1:6,24:30:69.24:1123,69,0	0/0:14,0:14:39.12:0,39,479	0/0:22,0:22:54.17:0,54,664	0/0:26,0:26:63.20:0,63,776	0/0:15,0:15:42.13:0,42,517	0/0:29,0:29:66.19:0,66,798	0/0:22,0:23:50.99:0,51,603	0/0:19,0:19:51.14:0,51,606	0/0:8,0:8:18.06:0,18,222	0/0:61,0:65:99:0,138,1616	0/0:14,0:14:36.11:0,36,443	0/1:3,9:12:9.89:364,0,10	1/1:5,20:25:54.18:881,54,0	0/0:21,0:23:53.99:0,54,642	0/0:17,0:18:41.96:0,42,493	0/0:14,0:14:38.95:0,39,457	0/0:6,0:6:12.04:0,12,148
chr10	37410286	.	GTCTCTC	G	5502.59	PASS	AB=0.875;AC=44;AF=0.786;AN=56;BaseQRankSum=-0.809;DP=362;FS=0.947;HRun=0;HaplotypeScore=96.7098;InbreedingCoeff=0.5335;MQ=63.49;MQ0=3;MQRankSum=-3.450;QD=18.65;ReadPosRankSum=0.309;VQSLOD=4.1282;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,9:18:26.42:272,26,0	1/1:3,0:3:3.01:39,3,0	1/1:22,0:17:2.59:10,3,0	0/0:19,0:11:3.01:0,3,30	1/1:1,4:6:11.93:125,12,0	1/1:4,5:11:22.56:359,23,0	1/1:9,3:12:15.80:201,16,0	0/1:8,4:12:46.28:172,0,46	1/1:9,4:14:19.87:280,20,0	1/1:7,5:12:11.76:237,12,0	1/1:5,3:8:6.02:72,6,0	0/0:5,0:8:3.43:0,3,147	1/1:4,3:7:9.03:188,9,0	1/1:7,5:13:21.06:329,21,0	1/1:6,10:17:31.65:445,32,0	1/1:7,8:15:30.10:576,30,0	1/1:20,5:26:39.08:597,39,0	1/1:7,6:13:27.07:480,27,0	1/1:10,3:14:15.93:274,16,0	1/1:2,3:5:6.02:74,6,0	1/1:7,11:18:12.04:142,12,0	1/1:3,2:4:6.02:73,6,0	0/0:4,0:6:12.03:0,12,203	0/1:17,0:23:4.55:5,0,271	1/1:6,3:9:11.97:131,12,0	0/0:19,0:17:15.47:0,15,176	1/1:4,6:10:24.08:424,24,0	0/0:15,0:15:0.47:0,0,1
chr10	37410330	.	GTCTCTCTGTC	G	1098.72	PASS	AC=6;AF=0.111;AN=54;BaseQRankSum=2.875;DP=482;FS=3.216;HRun=0;HaplotypeScore=179.6597;InbreedingCoeff=0.8582;MQ=39.39;MQ0=36;MQRankSum=-4.021;QD=23.89;ReadPosRankSum=-1.638;VQSLOD=2.8796;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:34.75:0,35,1197	0/0:6,0:5:12.04:0,12,429	./.	0/0:35,0:1:0:0,0,0	0/0:21,0:20:16.82:0,17,525	0/0:14,0:14:27.09:0,27,873	0/0:20,0:19:21.07:0,21,843	0/0:36,0:34:72.24:0,72,1835	0/0:15,0:15:27.09:0,27,1174	0/0:18,0:18:48.15:0,48,1710	0/0:10,0:10:15.05:0,15,549	1/1:4,7:11:24.08:556,24,0	0/0:6,0:6:12.04:0,12,325	0/0:15,0:14:24.08:0,24,765	0/0:17,0:17:27.09:0,27,1039	0/0:11,0:11:20.10:0,20,582	0/0:27,0:26:48.16:0,48,1610	0/0:19,0:19:39.11:0,39,1234	0/0:18,0:12:21.07:0,21,585	0/0:13,0:13:21.07:0,21,608	0/0:30,0:29:24.89:0,25,718	0/0:9,0:9:12.04:0,12,377	1/1:6,4:10:21.07:348,21,0	1/1:20,5:23:12.05:331,12,0	0/0:11,0:11:18.06:0,18,698	0/0:16,0:15:32.90:0,33,846	0/0:11,0:11:21.07:0,21,613	0/0:4,0:4:6.02:0,6,211
chr10	37410344	.	C	CTG	447.92	PASS	AB=0.970;AC=7;AF=0.130;AN=54;BaseQRankSum=5.529;DP=558;FS=0.858;HRun=0;HaplotypeScore=170.3299;InbreedingCoeff=0.5025;MQ=39.77;MQ0=47;MQRankSum=-3.506;QD=3.61;ReadPosRankSum=0.553;VQSLOD=2.5233;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:48.10:0,48,660	0/0:5,0:5:12.04:0,12,183	./.	0/1:52,0:1:0:0,0,0	0/0:22,0:21:23.98:0,24,345	0/0:21,0:21:45.06:0,45,557	0/0:21,0:20:23.87:0,24,338	0/0:44,0:42:99:0,109,1447	0/0:18,0:18:36.11:0,36,529	0/0:22,0:22:63.16:0,63,876	0/0:10,0:10:18.06:0,18,273	1/1:13,0:13:2.81:250,3,0	0/0:10,0:10:17.92:0,18,206	0/0:17,0:16:24.08:0,24,365	0/0:19,0:19:36.11:0,36,529	0/0:13,0:13:23.90:0,24,312	0/0:27,0:27:57.11:0,57,797	0/0:21,0:21:51.12:0,51,731	0/0:12,0:9:27.07:0,27,383	0/0:17,0:17:21.07:0,21,319	0/0:25,0:24:29.97:0,30,402	0/0:12,0:10:11.86:0,12,183	0/1:9,1:10:46.36:87,0,46	1/1:25,5:28:14.12:215,14,0	0/0:14,0:13:18.06:0,18,274	0/1:19,0:18:15.98:16,0,349	0/0:17,0:17:33:0,33,430	0/0:5,0:5:9.03:0,9,137
chr10	37410370	.	TTC	T	5010.44	PASS	AB=0.829;AC=50;AF=0.926;AN=54;BaseQRankSum=0.047;DP=588;FS=7.722;HRun=0;HaplotypeScore=169.5719;InbreedingCoeff=0.0980;MQ=43.89;MQ0=38;MQRankSum=1.815;QD=9.35;ReadPosRankSum=0.877;VQSLOD=4.1540;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,25:39:62.59:590,63,0	1/1:1,0:6:5.68:28,6,0	./.	0/0:35,0:1:0:0,0,0	1/1:6,14:21:23.76:217,24,0	1/1:6,15:22:35.89:376,36,0	1/1:9,16:24:23.83:257,24,0	0/1:28,0:31:6.49:42,0,6	1/1:7,13:21:33.05:362,33,0	1/1:5,16:22:44.90:461,45,0	1/1:4,14:18:41.87:392,42,0	1/1:5,0:20:24.94:111,25,0	1/1:3,0:14:13.80:62,14,0	1/1:5,0:17:4.66:21,5,0	1/1:8,10:18:39.02:407,39,0	1/1:3,13:17:26.88:274,27,0	1/1:9,24:33:45.13:513,45,0	1/1:5,16:21:30.09:342,30,0	1/1:7,0:11:6.73:34,7,0	1/1:5,0:26:6.33:38,6,0	1/1:14,0:13:5.64:28,6,0	1/1:6,0:13:3.37:10,3,0	1/1:6,0:16:10.87:42,11,0	1/1:13,0:35:8.52:43,9,0	1/1:5,0:14:4.66:20,5,0	1/1:9,0:24:24.45:184,24,0	1/1:1,0:16:30.76:140,31,0	0/1:7,0:9:18.76:19,0,44
chr10	37410638	.	A	ACAAACAAG	49036.83	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-5.215;DP=703;FS=0.000;HRun=0;HaplotypeScore=141.2627;InbreedingCoeff=0.9007;MQ=57.57;MQ0=0;MQRankSum=-9.111;QD=73.96;ReadPosRankSum=3.151;VQSLOD=5.1314;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,24:38:78.20:2966,78,0	1/1:2,7:12:21.07:857,21,0	0/0:17,0:17:30.90:0,31,657	0/0:23,0:23:48.09:0,48,1292	1/1:6,17:27:57.11:1924,57,0	1/1:5,12:24:39.13:1570,39,0	1/1:12,13:32:69.23:2621,69,0	1/1:13,17:41:93.25:3028,93,0	1/1:4,17:33:54.19:2283,54,0	1/1:12,26:43:99:3952,109,0	1/1:3,11:17:39.13:1399,39,0	1/1:5,11:19:39.13:1472,39,0	1/1:5,22:30:72.25:2845,72,0	1/1:3,18:25:45.15:1928,45,0	1/1:8,19:36:57.19:2287,57,0	1/1:8,23:39:84.29:3361,84,0	1/1:4,19:31:57.17:2150,57,0	1/1:6,7:14:21.07:773,21,0	1/1:8,9:22:54.16:1869,54,0	1/1:3,13:19:36.05:1212,36,0	1/1:4,7:12:6.02:223,6,0	1/1:5,17:26:57.20:2277,57,0	1/1:3,7:16:17.99:660,18,0	1/1:1,9:13:12.04:515,12,0	1/1:5,12:19:42.14:1637,42,0	1/1:3,24:35:95.45:3205,95,0	1/1:2,14:30:39.13:1637,39,0	1/1:1,2:5:9.03:388,9,0
chr10	37410872	.	ACT	A	22661.60	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=2.739;DP=718;FS=19.049;HRun=0;HaplotypeScore=95.2650;InbreedingCoeff=0.9904;MQ=71.74;MQ0=9;MQRankSum=-6.129;QD=35.80;ReadPosRankSum=5.119;VQSLOD=5.5318;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,65:70:99:2247,154,0	1/1:1,16:17:39.11:574,39,0	0/0:21,0:20:22.37:0,22,786	0/0:21,0:22:56.80:0,57,879	1/1:2,22:24:60.20:866,60,0	1/1:1,19:20:42.14:618,42,0	1/1:0,31:31:72.24:1060,72,0	1/1:3,28:31:87.25:1222,87,0	1/1:1,29:29:63.21:928,63,0	1/1:0,30:30:87.23:1240,87,0	1/1:0,19:18:51.13:719,51,0	1/1:0,16:16:39.13:566,39,0	1/1:0,27:26:63.21:926,63,0	1/1:0,16:16:41.95:618,42,0	1/1:1,33:33:81.27:1193,81,0	1/1:0,21:19:54.18:795,54,0	1/1:0,43:43:99:1590,108,0	1/1:1,26:26:54.18:792,54,0	1/1:0,16:16:48.15:688,48,0	1/1:1,37:37:99:1537,105,0	1/1:2,21:23:51.17:751,51,0	1/1:1,21:22:57.19:831,57,0	1/1:1,16:16:45.15:647,45,0	1/1:1,24:25:60.01:883,60,0	1/1:0,15:15:42.14:618,42,0	0/0:36,1:37:64.25:0,64,1912	1/1:0,21:21:51.17:751,51,0	0/0:4,0:4:12.04:0,12,225
chr10	37411599	.	C	CTT	8470.03	PASS	AB=0.583;AC=47;AF=0.839;AN=56;BaseQRankSum=-8.009;DP=522;FS=13.097;HRun=10;HaplotypeScore=75.7045;InbreedingCoeff=0.8170;MQ=66.46;MQ0=1;MQRankSum=-2.685;QD=18.91;ReadPosRankSum=1.986;VQSLOD=2.2722;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,11:15:33.10:472,33,0	1/1:2,0:13:3.74:51,4,0	0/0:12,0:12:23.04:0,23,182	0/0:11,0:11:17.96:0,18,174	1/1:3,24:25:69.23:1011,69,0	1/1:5,16:22:47.64:663,48,0	1/1:5,10:14:18.06:268,18,0	1/1:8,0:26:43.56:151,44,0	1/1:2,11:14:27.09:402,27,0	1/1:4,19:23:23.64:703,24,0	1/1:4,23:27:66.18:947,66,0	1/1:2,0:8:17.34:61,17,0	1/1:2,0:11:19.96:70,20,0	1/1:1,0:10:17.47:61,17,0	1/1:6,24:30:56.68:814,57,0	1/1:3,10:14:27.09:402,27,0	1/1:7,22:28:72.11:998,72,0	1/1:1,12:14:38.61:529,39,0	1/1:5,0:22:35.06:126,35,0	1/1:2,0:20:29.94:106,30,0	1/1:1,0:7:14.97:53,15,0	0/1:2,0:7:17.09:22,0,17	1/1:4,0:17:32.44:114,32,0	1/1:2,0:8:14.97:53,15,0	1/1:3,1:28:55.41:229,55,0	0/0:33,1:36:30.13:0,30,669	1/1:6,0:37:27.40:163,27,0	0/0:12,0:12:27.06:0,27,275
chr10	37411617	.	AATTT	A	1934.53	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-4.675;DP=513;FS=2.965;HRun=0;HaplotypeScore=109.8740;InbreedingCoeff=0.8555;MQ=54.89;MQ0=15;MQRankSum=-0.702;QD=39.48;ReadPosRankSum=2.068;VQSLOD=3.8040;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:19:36.12:0,36,894	0/0:11,0:11:24.08:0,24,607	0/0:8,0:3:2.98:0,3,21	0/0:8,0:4:9.03:0,9,223	0/0:30,0:28:66.09:0,66,1299	0/0:21,0:20:51.18:0,51,1296	0/0:17,0:16:29.93:0,30,565	0/0:25,0:22:57.19:0,57,1352	0/0:15,0:15:36.11:0,36,843	0/0:24,0:24:57.20:0,57,1448	0/0:22,0:22:57.20:0,57,1456	0/0:12,0:12:33.01:0,33,753	0/0:15,0:15:42.11:0,42,926	0/0:13,0:13:30.10:0,30,769	0/0:23,0:22:48.16:0,48,1203	0/0:13,0:13:33.11:0,33,801	0/0:33,0:31:54.19:0,54,1392	0/0:19,0:17:39.13:0,39,974	0/0:21,0:20:51.17:0,51,1271	0/0:19,0:19:45.11:0,45,1104	0/0:5,0:5:9.03:0,9,232	0/0:9,0:9:27.09:0,27,621	0/0:20,0:20:51.16:0,51,1176	0/0:9,0:8:15.05:0,15,377	0/0:27,0:27:75.24:0,75,1825	1/1:3,32:34:18.86:1520,19,0	0/0:25,0:25:66.23:0,66,1668	1/1:1,13:14:30.10:534,30,0
chr10	37414477	.	CCCGT	C	2935.34	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=10.064;DP=635;FS=1.838;HRun=0;HaplotypeScore=103.6139;InbreedingCoeff=0.9998;MQ=63.12;MQ0=1;MQRankSum=-4.064;QD=47.34;ReadPosRankSum=1.553;VQSLOD=4.1971;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,141,3833	0/0:13,0:13:39.13:0,39,1090	0/0:26,0:26:62.83:0,63,1777	0/0:19,0:18:38.38:0,38,1177	0/0:32,0:32:96.33:0,96,2681	0/0:18,0:18:51.16:0,51,1368	0/0:20,0:20:60.16:0,60,1582	0/0:34,0:34:96.30:0,96,2452	0/0:17,0:17:51.16:0,51,1324	0/0:33,0:33:96.32:0,96,2478	0/0:16,0:16:48.15:0,48,1284	1/1:0,25:25:72.24:1403,72,0	0/0:25,0:25:72.24:0,72,1949	0/0:18,0:18:51.18:0,51,1419	0/0:14,0:14:42.13:0,42,1116	0/0:13,0:13:36.12:0,36,1007	0/0:32,0:32:87.28:0,87,2264	0/0:28,0:28:84.29:0,84,2298	0/0:22,0:22:57.18:0,57,1530	0/0:23,0:23:66.23:0,66,1752	0/0:21,0:21:63.22:0,63,1747	0/0:16,0:16:48.16:0,48,1343	1/1:0,21:21:51.18:1017,51,0	1/1:1,15:15:33.11:658,33,0	0/0:23,0:23:63.22:0,63,1723	0/0:19,0:19:54.19:0,54,1510	0/0:26,0:26:75.25:0,75,2017	0/0:16,0:16:48.14:0,48,1279
chr10	37415631	.	AACACACAC	A	2426	PASS	AB=0.828;AC=24;AF=0.444;AN=54;BaseQRankSum=3.931;DP=484;FS=64.442;HRun=0;HaplotypeScore=115.9964;InbreedingCoeff=0.6104;MQ=71.69;MQ0=9;MQRankSum=-5.680;QD=11.34;ReadPosRankSum=-1.154;VQSLOD=-0.5378;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:20,13:30:5.76:109,6,0	0/0:10,0:10:18.01:0,18,338	0/0:32,0:21:0.89:0,1,2	0/0:30,0:22:8.94:0,9,116	1/1:11,7:19:16.68:250,17,0	1/1:13,6:21:15.04:309,15,0	1/1:12,7:19:9.03:188,9,0	0/0:23,0:21:3.73:0,4,16	1/1:7,8:15:15.05:354,15,0	1/1:13,6:19:14.91:350,15,0	1/1:13,0:13:3:27,3,0	0/0:9,0:10:5.99:0,6,49	1/1:6,0:7:2.90:16,3,0	0/0:4,0:6:2.99:0,3,24	1/1:4,6:10:15.05:377,15,0	1/1:3,7:10:12.04:287,12,0	1/1:11,1:13:9.03:172,9,0	0/1:11,4:15:61.17:122,0,61	./.	0/0:17,0:17:9.02:0,9,123	0/0:28,0:34:60.01:0,60,732	0/0:15,0:20:27:0,27,398	0/0:11,0:15:8.98:0,9,73	0/0:13,0:28:35.91:0,36,290	0/0:9,0:14:2.18:0,2,211	0/0:17,0:17:21.07:0,21,696	0/1:15,0:17:54.09:54,0,94	0/0:6,0:6:15.05:0,15,538
chr10	37415796	.	A	ACCC	5931.09	PASS	AB=0.926;AC=37;AF=0.661;AN=56;BaseQRankSum=-5.441;DP=461;FS=0.523;HRun=4;HaplotypeScore=109.8544;InbreedingCoeff=0.1420;MQ=63.55;MQ0=18;MQRankSum=-2.195;QD=16.25;ReadPosRankSum=0.181;VQSLOD=1.0776;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:28:32.33:101,0,32	1/1:3,4:7:9.03:187,9,0	0/0:58,0:17:19.31:0,19,366	0/1:60,0:23:8.29:8,0,117	0/1:21,0:22:51.72:52,0,69	0/1:13,0:13:10.72:11,0,35	0/1:11,0:10:0.53:22,0,1	1/1:4,12:16:33.11:711,33,0	0/1:10,0:10:32.50:102,0,33	1/1:14,0:14:29.43:138,29,0	0/1:14,0:14:47.94:48,0,84	1/1:1,0:6:17.97:245,18,0	1/1:0,9:9:15.05:333,15,0	1/1:3,3:6:14.86:276,15,0	0/0:11,0:11:2.67:0,3,27	0/1:11,0:12:8.97:76,0,9	0/1:16,0:16:42.01:42,0,47	0/1:15,0:16:16.70:32,0,17	1/1:11,8:20:39.13:746,39,0	1/1:5,7:12:18.06:365,18,0	1/1:1,8:10:8.58:444,9,0	1/1:4,4:8:21.03:381,21,0	1/1:4,2:10:14.98:174,15,0	1/1:3,1:12:27.09:463,27,0	0/1:2,8:12:0.50:615,0,0	0/0:14,0:15:13.03:0,13,374	1/1:6,5:11:21.04:360,21,0	0/0:8,0:7:21.05:0,21,224
chr10	37415799	.	C	CAA	73.87	PASS	AB=0.951;AC=6;AF=0.107;AN=56;BaseQRankSum=-2.871;DP=479;FS=0.828;HRun=0;HaplotypeScore=132.5630;InbreedingCoeff=0.1863;MQ=63.57;MQ0=16;MQRankSum=-1.664;QD=0.65;ReadPosRankSum=-1.747;VQSLOD=2.4091;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:27:37.45:0,37,339	0/0:6,0:6:5.27:0,5,22	0/0:73,0:19:22.94:0,23,445	0/1:67,0:24:25.73:26,0,194	0/0:22,0:22:44.31:0,44,422	0/0:14,0:13:35.66:0,36,350	0/0:11,0:10:14.84:0,15,133	0/0:17,0:16:17.21:0,17,145	0/0:10,0:10:24.15:0,24,222	0/0:16,0:16:27.59:0,28,293	0/0:14,0:14:32.33:0,32,293	0/0:7,0:7:16.55:0,17,100	0/0:10,0:10:9.31:0,9,60	0/0:6,0:6:10.83:0,11,46	0/0:11,0:11:20.94:0,21,206	0/0:11,0:11:13.25:0,13,103	0/0:16,0:16:37.63:0,38,374	0/0:18,0:17:9.63:0,10,286	0/0:20,0:18:39.21:0,39,242	0/0:10,0:10:13.13:0,13,66	0/0:11,0:11:6.47:0,6,70	0/1:10,0:9:19.10:19,0,40	0/0:10,0:10:15.28:0,15,97	0/0:11,0:11:15.07:0,15,92	0/0:12,0:12:18.24:0,18,105	0/1:12,3:15:19.23:72,0,19	0/1:11,0:11:2.66:3,0,74	1/1:3,1:7:9.32:72,9,0
chr10	37415800	.	C	CCCCA	4695.89	PASS	AB=1.000;AC=35;AF=0.625;AN=56;BaseQRankSum=-5.462;DP=480;FS=3.478;HRun=0;HaplotypeScore=129.0736;InbreedingCoeff=0.1483;MQ=64.50;MQ0=16;MQRankSum=-5.890;QD=15.86;ReadPosRankSum=-1.516;VQSLOD=3.9780;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:27:63.94:86,0,64	1/1:5,0:5:9.03:147,9,0	0/0:74,0:20:33.75:0,34,493	0/0:75,0:24:13.13:0,13,194	0/1:22,0:22:38.75:39,0,146	0/0:14,0:13:15.43:0,15,101	0/1:11,0:10:9.91:10,0,19	1/1:16,0:15:4.48:512,4,0	0/1:10,0:10:56.71:109,0,57	1/1:15,0:16:8.13:98,8,0	0/1:14,0:14:41.91:42,0,121	1/1:7,0:7:20.47:221,20,0	1/1:10,0:10:15.05:251,15,0	1/1:5,0:5:13.60:198,14,0	0/0:11,0:11:12.83:0,13,60	0/1:11,0:11:24.97:66,0,25	0/1:16,0:16:29.90:30,0,83	0/1:18,0:17:31.40:31,0,65	1/1:14,3:16:22.06:661,22,0	1/1:9,0:9:18.03:266,18,0	0/1:11,0:11:7.69:323,0,8	1/1:8,1:9:19.62:352,20,0	1/1:8,0:8:14.78:144,15,0	1/1:12,0:12:27.09:422,27,0	0/1:12,0:12:0.43:461,0,0	0/1:18,0:18:11.96:12,0,285	1/1:10,0:10:5.06:215,5,0	0/0:7,0:7:20.87:0,21,174
chr10	37415819	.	CCA	C	3471.33	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=2.209;DP=532;FS=2.355;HRun=0;HaplotypeScore=113.3793;InbreedingCoeff=0.7575;MQ=57.41;MQ0=45;MQRankSum=-0.478;QD=11.49;ReadPosRankSum=3.805;VQSLOD=3.4842;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,12:21:8.90:59,9,0	1/1:2,2:4:5.74:38,6,0	0/0:93,0:17:12.59:0,13,131	0/0:123,0:29:20.21:0,20,230	1/1:7,9:16:26.72:201,27,0	1/1:11,3:13:32.83:319,33,0	1/1:5,6:11:3:27,3,0	1/1:18,0:17:26.12:268,26,0	1/1:6,2:8:12.03:128,12,0	1/1:12,2:13:18.03:192,18,0	1/1:7,7:14:14.81:97,15,0	1/1:4,2:6:11.96:111,12,0	1/1:5,0:5:8.24:74,8,0	1/1:5,3:6:11.98:113,12,0	1/1:9,6:14:8.98:82,9,0	1/1:4,7:11:11.96:108,12,0	1/1:14,2:16:27.02:279,27,0	1/1:12,3:15:20.13:211,20,0	1/1:20,1:17:18.03:189,18,0	1/1:5,2:6:8.94:71,9,0	1/1:19,0:16:9.27:91,9,0	1/1:4,2:6:11.83:76,12,0	1/1:7,3:10:20.77:170,21,0	1/1:11,4:15:14.92:131,15,0	1/1:8,6:14:26.82:217,27,0	0/0:11,0:11:11.71:0,12,138	1/1:10,3:12:26.64:217,27,0	0/0:2,0:2:6.02:0,6,92
chr10	37415839	.	AC	A	909.60	PASS	AB=0.899;AC=25;AF=0.446;AN=56;BaseQRankSum=8.857;DP=459;FS=4.447;HRun=1;HaplotypeScore=113.1951;InbreedingCoeff=-0.3272;MQ=43.23;MQ0=31;MQRankSum=-5.999;QD=3.25;ReadPosRankSum=1.091;VQSLOD=0.2012;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:21:15.39:49,0,15	0/1:7,0:7:20.98:21,0,82	0/0:55,0:7:16.90:0,17,182	0/0:71,1:13:21.08:0,21,299	0/1:11,3:14:17.90:123,0,18	0/1:15,1:17:7.95:63,0,8	0/0:10,1:11:2.27:0,2,47	0/0:26,0:22:34.63:0,35,319	0/1:4,2:6:0.32:22,0,0	0/1:10,2:11:8.12:8,0,123	1/1:9,0:9:14.79:97,15,0	0/1:10,0:10:26.34:26,0,58	0/1:6,2:8:13.71:14,0,90	0/1:9,2:9:29.84:30,0,38	0/1:13,2:14:26.63:27,0,75	0/1:10,2:12:50.38:51,0,50	0/1:11,2:13:16.17:59,0,16	0/1:10,1:11:5.17:5,0,34	0/1:13,1:13:21.08:21,0,182	0/1:8,0:7:27.44:27,0,42	0/1:22,0:19:9.88:10,0,49	1/1:5,0:5:11.83:76,12,0	0/1:10,3:13:18.30:92,0,18	0/1:16,0:16:33.57:46,0,34	1/1:13,3:16:11.94:149,12,0	0/0:12,0:12:36:0,36,395	0/1:14,3:16:59.17:59,0,85	0/0:3,0:3:9.01:0,9,119
chr10	37415840	.	CAA	C	2271.07	PASS	AB=0.997;AC=48;AF=0.857;AN=56;BaseQRankSum=2.405;DP=461;FS=7.203;HRun=3;HaplotypeScore=113.4787;InbreedingCoeff=0.0126;MQ=43.53;MQ0=31;MQRankSum=4.022;QD=5.79;ReadPosRankSum=1.925;VQSLOD=-0.0083;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:23:6.90:29,0,7	0/1:7,0:7:2.27:56,0,2	0/1:53,0:7:26.31:26,0,41	0/0:68,0:13:10.57:0,11,99	1/1:14,0:14:10.93:77,11,0	1/1:16,0:16:23.85:118,24,0	1/1:11,0:11:5.68:83,6,0	1/1:8,18:22:16.53:260,17,0	1/1:7,0:7:13.51:72,14,0	1/1:12,0:11:3.29:105,3,0	1/1:9,0:9:2.45:23,2,0	1/1:10,0:10:9.76:84,10,0	1/1:8,0:8:7.68:59,8,0	1/1:11,0:9:14.61:96,15,0	1/1:15,0:14:13.77:125,14,0	1/1:12,0:12:14.40:104,14,0	1/1:13,0:13:17.81:107,18,0	1/1:11,0:11:24.75:128,25,0	0/1:14,0:12:39.32:72,0,39	1/1:8,0:7:7.46:73,7,0	1/1:25,0:21:9.78:106,10,0	1/1:6,0:6:2.60:23,3,0	1/1:13,0:13:10.63:92,11,0	1/1:16,0:16:10.83:67,11,0	1/1:16,0:16:0.60:56,1,0	0/1:13,0:13:40.21:163,0,40	1/1:17,0:16:25.36:187,25,0	0/1:3,0:3:15.95:16,0,44
chr10	37415841	.	AAACACACACAC	A	2502.85	PASS	AB=0.928;AC=31;AF=0.554;AN=56;BaseQRankSum=3.499;DP=465;FS=4.584;HRun=0;HaplotypeScore=153.5007;InbreedingCoeff=-0.0715;MQ=43.69;MQ0=29;MQRankSum=1.491;QD=8.34;ReadPosRankSum=-0.198;VQSLOD=2.5819;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:23:0.25:0,0,12	0/1:7,0:7:41.79:83,0,42	0/0:54,0:7:13.59:0,14,134	0/0:65,0:13:19.63:0,20,226	1/1:13,2:15:13.57:184,14,0	0/1:15,1:16:23.65:157,0,24	0/1:10,1:11:0.19:134,0,0	0/1:26,0:22:0.29:0,0,154	0/1:5,2:7:4.58:177,0,5	0/1:11,1:12:99:126,0,103	1/1:10,0:10:5.27:22,5,0	0/1:11,0:11:9.12:14,0,9	0/1:6,2:8:60.92:149,0,61	1/1:9,2:9:5.29:180,5,0	1/1:13,2:14:18.05:220,18,0	1/1:10,2:12:13.84:199,14,0	0/1:11,1:13:40.91:136,0,41	0/1:10,1:11:44.56:67,0,45	0/1:13,1:12:67.60:68,0,184	0/1:8,0:7:1.53:2,0,13	0/1:26,0:22:14.22:14,0,18	1/1:6,0:6:2.18:11,2,0	1/1:10,0:13:12.62:222,13,0	0/0:16,0:16:6.75:0,7,27	1/1:13,3:16:8.87:253,9,0	0/1:13,0:13:7.60:8,0,213	0/1:16,2:17:22.23:241,0,22	0/0:3,0:3:8.82:0,9,91
chr10	37417666	.	CCGCG	C	6393.27	PASS	AB=0.963;AC=46;AF=0.852;AN=54;BaseQRankSum=-4.417;DP=490;FS=15.453;HRun=0;HaplotypeScore=111.6109;InbreedingCoeff=0.5687;MQ=77.28;MQ0=14;MQRankSum=1.069;QD=14.77;ReadPosRankSum=2.787;VQSLOD=3.7424;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:30,1:28:28.64:399,29,0	1/1:12,3:15:23.79:285,24,0	0/0:14,0:12:3:0,3,25	0/1:23,0:17:3.15:10,0,3	1/1:19,2:21:18.05:256,18,0	1/1:17,0:16:24.80:366,25,0	1/1:31,2:33:41.82:580,42,0	1/1:12,4:16:12.04:184,12,0	1/1:13,1:14:5.82:82,6,0	1/1:15,0:15:21.06:310,21,0	1/1:11,0:11:12.02:160,12,0	1/1:10,0:9:8.27:47,8,0	1/1:13,1:14:12.04:173,12,0	1/1:16,2:18:20.94:287,21,0	1/1:13,0:13:24.06:339,24,0	1/1:8,1:8:5.91:63,6,0	1/1:20,3:21:33.07:421,33,0	1/1:18,1:19:42.05:560,42,0	1/1:7,0:7:15.03:197,15,0	1/1:11,1:12:14.64:220,15,0	1/1:44,0:42:45.13:659,45,0	1/1:8,0:8:6.02:93,6,0	./.	0/1:23,0:24:23.15:71,0,23	1/1:16,1:17:17.69:186,18,0	0/0:21,0:20:31.62:0,32,407	1/1:14,1:14:32.14:445,32,0	0/0:12,0:11:12.04:0,12,152
chr10	37417720	.	ACACACACACACACACC	A	4017.51	PASS	AB=0.954;AC=30;AF=0.577;AN=52;BaseQRankSum=1.760;DP=496;FS=0.000;HRun=0;HaplotypeScore=168.3921;InbreedingCoeff=-0.1001;MQ=47.10;MQ0=38;MQRankSum=1.376;QD=9.94;ReadPosRankSum=0.430;VQSLOD=2.5502;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:35,0:31:31.28:365,31,0	1/1:13,1:14:8.62:253,9,0	0/0:13,0:5:8.15:0,8,97	0/0:16,0:8:10.37:0,10,170	1/1:8,15:23:0.35:1,0,0	0/0:9,11:17:3.89:0,4,37	1/1:27,2:27:7.57:208,8,0	0/1:23,0:20:99:189,0,139	1/1:9,1:10:1.53:9,2,0	0/1:19,1:19:7.16:382,0,7	./.	0/0:16,0:15:27.07:0,27,1085	0/1:5,10:15:18.23:234,0,18	0/1:17,0:16:48.99:108,0,49	0/0:9,0:9:0.89:0,1,2	1/1:5,5:7:8.96:234,9,0	0/1:28,1:25:28.38:322,0,28	1/1:8,1:8:11.64:221,12,0	0/1:11,0:10:25.68:294,0,26	0/1:18,0:18:67.90:95,0,68	1/1:28,0:22:6.67:108,7,0	./.	0/1:11,0:10:15.92:16,0,159	0/1:29,0:25:35.77:36,0,1900	0/1:22,2:22:11.93:222,0,12	0/1:30,0:28:99:417,0,339	1/1:16,0:14:4.57:294,5,0	0/1:3,0:3:9.97:10,0,66
chr10	37417722	.	ACACACACACACACC	A	4424.34	PASS	AB=0.932;AC=34;AF=0.654;AN=52;BaseQRankSum=0.674;DP=465;FS=0.000;HRun=0;HaplotypeScore=149.3580;InbreedingCoeff=0.1844;MQ=48.43;MQ0=38;MQRankSum=-0.111;QD=11.83;ReadPosRankSum=1.367;VQSLOD=3.7756;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:26,3:25:33.42:426,33,0	1/1:5,8:13:11.93:247,12,0	0/0:14,0:6:11.15:0,11,122	0/0:16,0:8:10.37:0,10,170	1/1:20,2:22:3.88:25,4,0	0/0:18,1:16:0.89:0,1,2	1/1:24,2:24:7.84:201,8,0	0/1:21,0:18:27.09:238,0,27	1/1:1,10:11:1.84:9,2,0	1/1:6,11:16:24.84:462,25,0	./.	0/0:16,0:15:27.05:0,27,853	1/1:14,0:14:11.32:240,11,0	0/1:12,2:13:5.75:130,0,6	0/0:2,6:8:0.89:0,1,2	1/1:8,2:7:8.91:240,9,0	1/1:5,22:23:17.86:392,18,0	1/1:10,0:9:17.37:242,17,0	0/1:3,8:10:1.19:335,0,1	0/1:16,0:16:5.20:105,0,5	1/1:27,0:21:26.90:200,27,0	./.	0/1:11,0:10:37.85:38,0,106	0/1:28,0:24:35.77:36,0,1540	1/1:25,0:23:4.13:212,4,0	0/1:25,0:25:99:367,0,262	1/1:13,1:13:9.02:271,9,0	0/1:3,0:3:9.97:10,0,46
chr10	37417724	.	ACACACACACACC	A	4618.41	PASS	AB=0.990;AC=38;AF=0.792;AN=48;BaseQRankSum=0.014;DP=448;FS=0.000;HRun=0;HaplotypeScore=138.8482;InbreedingCoeff=0.3025;MQ=51.30;MQ0=34;MQRankSum=-1.222;QD=12.83;ReadPosRankSum=1.721;VQSLOD=3.1796;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:31,0:27:36.97:390,37,0	1/1:9,3:12:11.93:250,12,0	0/0:15,0:7:13.95:0,14,135	0/0:17,0:9:13.38:0,13,208	1/1:20,1:21:3.46:25,3,0	./.	1/1:8,16:22:7.57:183,8,0	1/1:20,0:17:30.99:303,31,0	1/1:11,0:11:1.83:9,2,0	1/1:15,0:14:31.23:409,31,0	./.	0/0:17,0:16:1.57:0,2,580	1/1:12,1:13:11.95:232,12,0	1/1:8,4:11:14.33:212,14,0	./.	1/1:9,0:7:8.72:209,9,0	1/1:27,0:23:17.86:366,18,0	1/1:9,0:8:17.66:228,18,0	1/1:10,1:10:4.21:340,4,0	1/1:10,5:15:20.94:170,21,0	1/1:27,0:21:29.85:298,30,0	./.	0/1:11,0:10:37.86:38,0,55	0/1:28,0:25:36.18:36,0,1181	1/1:5,19:23:8.01:232,8,0	0/1:23,1:24:99:366,0,201	1/1:3,9:12:9.03:311,9,0	0/1:4,0:4:9.97:10,0,36
chr10	37417728	.	ACACACACC	A	4299.38	PASS	AB=0.860;AC=41;AF=0.854;AN=48;BaseQRankSum=0.305;DP=445;FS=4.965;HRun=0;HaplotypeScore=124.2563;InbreedingCoeff=0.3357;MQ=53.56;MQ0=30;MQRankSum=-0.686;QD=11.50;ReadPosRankSum=1.192;VQSLOD=3.4573;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:32,0:29:40.19:359,40,0	1/1:12,0:12:11.93:187,12,0	0/0:15,0:7:13.95:0,14,135	0/0:18,0:10:16.38:0,16,235	1/1:21,0:21:2.99:24,3,0	./.	1/1:23,0:21:6.91:131,7,0	1/1:20,0:17:43.08:391,43,0	1/1:11,0:11:2.57:11,3,0	1/1:15,0:14:32.99:326,33,0	./.	0/1:17,0:16:81.32:81,0,184	1/1:13,0:13:11.95:169,12,0	1/1:12,0:11:14.31:149,14,0	./.	1/1:9,0:7:8.86:147,9,0	1/1:26,0:23:17.86:274,18,0	1/1:11,0:10:24.79:246,25,0	1/1:10,0:9:22.74:286,23,0	1/1:17,0:17:29.94:244,30,0	1/1:25,0:20:36.75:287,37,0	./.	1/1:13,0:12:17.65:127,18,0	0/1:28,0:25:64.20:64,0,423	1/1:22,0:21:8.96:164,9,0	0/1:6,16:22:85.40:408,0,85	1/1:10,0:10:9.03:209,9,0	1/1:1,4:5:2.90:16,3,0
chr10	37420444	.	AC	A	850.37	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.458;DP=449;FS=3.101;HRun=1;HaplotypeScore=43.8854;InbreedingCoeff=0.9857;MQ=66.83;MQ0=0;MQRankSum=-2.427;QD=35.43;ReadPosRankSum=-0.172;VQSLOD=3.2395;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:99:0,99,1520	0/0:5,0:5:15.05:0,15,235	0/0:16,0:16:48.13:0,48,648	0/0:19,0:19:57.10:0,57,834	0/0:16,0:16:48.14:0,48,726	0/0:17,0:17:51.14:0,51,750	0/0:21,0:21:62.21:0,62,889	0/0:27,0:27:81.21:0,81,1216	0/0:10,0:10:30.09:0,30,443	0/0:15,0:15:45.14:0,45,650	0/0:11,0:11:33.11:0,33,516	0/0:18,0:18:54.17:0,54,820	0/0:11,0:11:33.11:0,33,512	0/0:18,0:17:51.10:0,51,704	0/0:12,0:12:33.10:0,33,494	0/0:11,0:11:33.09:0,33,472	0/0:32,0:32:96.33:0,96,1500	0/0:14,0:14:42.10:0,42,628	0/0:17,0:17:51.17:0,51,797	0/0:7,0:7:21.07:0,21,320	0/0:28,0:28:84.26:0,84,1267	0/0:8,0:8:21.07:0,21,328	0/0:11,0:11:33.10:0,33,494	0/0:22,0:22:66.21:0,66,1007	0/0:8,0:8:24.08:0,24,374	1/1:0,13:13:39.10:511,39,0	0/0:18,0:18:54.17:0,54,818	1/1:0,11:11:33.11:461,33,0
chr10	37420565	.	GAATA	G	1253.10	PASS	AC=8;AF=0.174;AN=46;BaseQRankSum=-0.371;DP=233;FS=1.867;HRun=0;HaplotypeScore=53.1107;InbreedingCoeff=0.5034;MQ=51.50;MQ0=4;MQRankSum=6.303;QD=19.89;ReadPosRankSum=4.377;VQSLOD=3.2863;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:15:15.91:0,16,220	0/0:3,0:3:3.01:0,3,52	./.	./.	1/1:6,3:9:6.02:93,6,0	0/0:8,0:8:6.02:0,6,104	./.	0/0:25,0:25:48.15:0,48,643	1/1:2,3:5:3.01:48,3,0	0/0:4,0:4:6.02:0,6,83	0/0:6,0:6:3.01:0,3,40	0/0:5,0:5:9.03:0,9,173	0/0:2,0:5:3.01:0,3,52	0/0:6,0:5:6.01:0,6,61	0/0:4,0:4:6.01:0,6,77	1/1:3,4:7:9.03:143,9,0	1/1:9,33:42:68.17:1097,68,0	0/0:14,0:14:6.02:0,6,104	0/0:7,0:9:11.96:0,12,146	0/0:4,0:5:3.01:0,3,52	./.	./.	0/0:5,0:5:3.01:0,3,64	0/0:3,0:3:6.02:0,6,115	0/0:6,0:9:9.03:0,9,140	0/0:3,0:3:6.01:0,6,80	0/0:12,0:11:15.04:0,15,199	0/0:8,0:8:12.02:0,12,156
chr10	37422201	.	A	AGA	7966.95	PASS	AB=0.876;AC=49;AF=0.875;AN=56;BaseQRankSum=-1.882;DP=465;FS=10.125;HRun=0;HaplotypeScore=92.3623;InbreedingCoeff=0.4046;MQ=59.88;MQ0=10;MQRankSum=-0.241;QD=19.29;ReadPosRankSum=1.716;VQSLOD=4.6610;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:31,0:30:34.38:524,34,0	1/1:1,5:7:3.01:37,3,0	0/0:20,0:11:6.01:0,6,63	0/0:32,0:13:6.01:0,6,144	1/1:17,0:17:27.07:311,27,0	1/1:12,0:12:29.61:391,30,0	1/1:26,0:25:48.16:729,48,0	1/1:18,0:18:23.69:283,24,0	1/1:12,0:12:20.79:263,21,0	1/1:16,0:15:24.06:326,24,0	1/1:14,0:13:23.97:329,24,0	1/1:12,0:13:33.11:499,33,0	1/1:11,0:11:1.38:6,1,0	0/1:9,12:22:27.79:40,0,28	1/1:17,0:17:32.67:445,33,0	1/1:12,0:12:20.77:257,21,0	1/1:17,0:15:29.74:434,30,0	1/1:27,0:24:50.62:721,51,0	1/1:16,0:16:27.08:368,27,0	0/1:13,0:13:18.81:149,0,19	1/1:20,0:20:36.04:489,36,0	1/1:10,0:10:6.02:73,6,0	1/1:11,0:9:15.05:223,15,0	1/1:15,0:14:18.50:245,19,0	1/1:20,0:19:38.99:513,39,0	1/1:14,0:14:0.08:34,0,0	1/1:16,0:16:20.74:278,21,0	0/1:5,0:4:0.04:0,0,0
chr10	37422202	.	GAGAGAGAA	G	4479.70	PASS	AB=0.940;AC=45;AF=0.804;AN=56;BaseQRankSum=-0.449;DP=457;FS=0.000;HRun=0;HaplotypeScore=133.8175;InbreedingCoeff=0.1263;MQ=59.77;MQ0=10;MQRankSum=5.727;QD=11.06;ReadPosRankSum=6.830;VQSLOD=2.9030;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:31,0:30:37.49:260,37,0	1/1:8,0:8:5.83:45,6,0	0/0:20,0:11:6.49:0,6,68	0/0:32,0:13:4.25:0,4,94	1/1:17,0:17:26.39:156,26,0	1/1:12,0:12:31.62:206,32,0	1/1:26,0:25:44.48:316,44,0	0/1:19,0:18:24.02:147,0,24	1/1:12,0:12:10.58:171,11,0	0/1:16,0:15:56.33:135,0,56	0/1:14,0:13:67.38:111,0,67	1/1:13,0:13:28.42:208,28,0	0/1:3,8:11:3.48:75,0,3	0/1:22,0:22:17.74:41,0,18	0/1:17,0:17:2.93:148,0,3	1/1:11,0:11:14.09:115,14,0	1/1:16,0:14:33.16:230,33,0	1/1:26,0:23:57.67:392,58,0	1/1:15,0:15:9.04:182,9,0	0/1:12,0:12:12.87:65,0,13	1/1:20,0:20:37.26:263,37,0	1/1:9,0:9:5.83:33,6,0	1/1:11,0:9:13.41:110,13,0	1/1:14,0:13:23.16:158,23,0	1/1:20,0:19:32.98:272,33,0	1/1:13,0:13:35.97:316,36,0	1/1:14,1:15:21.72:231,22,0	1/1:5,0:4:11.97:95,12,0
chr10	37422208	.	GAA	G	4847.75	PASS	AB=0.802;AC=44;AF=0.786;AN=56;BaseQRankSum=-0.876;DP=470;FS=3.570;HRun=3;HaplotypeScore=100.3763;InbreedingCoeff=0.0834;MQ=56.45;MQ0=13;MQRankSum=7.512;QD=11.38;ReadPosRankSum=7.276;VQSLOD=1.4678;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:28:49.91:376,50,0	1/1:7,0:7:5.83:45,6,0	0/0:15,0:6:6.49:0,6,68	0/0:28,0:11:4.25:0,4,94	1/1:1,16:17:27.95:159,28,0	1/1:14,0:14:37.10:248,37,0	1/1:31,0:30:51.65:407,52,0	0/1:17,9:25:79.02:137,0,79	1/1:15,0:15:0.69:158,1,0	1/1:14,0:13:15.94:162,16,0	1/1:14,0:13:2.50:116,3,0	1/1:15,0:15:26.95:205,27,0	0/1:10,0:10:4.03:16,0,4	0/1:23,0:22:10.45:97,0,10	1/1:16,0:16:32.37:221,32,0	0/1:10,0:10:6.28:119,0,6	1/1:20,0:17:30.17:235,30,0	1/1:26,0:23:46.96:419,47,0	0/1:4,12:16:2.30:206,0,2	0/1:2,10:12:12.97:65,0,13	1/1:20,0:19:44.73:334,45,0	0/1:2,8:10:1.70:23,0,2	1/1:9,0:7:13.38:110,13,0	0/1:16,0:14:22.44:129,0,22	1/1:20,0:19:33.91:290,34,0	1/1:15,0:15:8.69:280,9,0	1/1:16,0:16:13.11:195,13,0	1/1:5,0:4:11.97:95,12,0
chr10	37423011	.	A	AAG	2739.14	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-0.842;DP=457;FS=4.001;HRun=0;HaplotypeScore=95.8248;InbreedingCoeff=0.9247;MQ=75.43;MQ0=12;MQRankSum=-0.778;QD=19.29;ReadPosRankSum=0.226;VQSLOD=3.7753;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:31:35.77:0,36,273	1/1:10,0:9:26.86:233,27,0	0/0:23,0:17:26.08:0,26,262	0/0:28,0:18:9.52:0,10,244	0/0:12,0:11:17.96:0,18,145	0/0:13,0:13:23.91:0,24,194	0/0:33,0:30:49.79:0,50,421	1/1:25,2:25:75.01:717,75,0	0/0:8,0:8:7.78:0,8,64	0/0:11,0:10:12.79:0,13,86	0/0:17,0:15:24.21:0,24,178	0/0:16,0:16:22.88:0,23,144	1/1:10,0:10:20.93:184,21,0	1/1:9,0:9:20.54:166,21,0	0/0:19,0:18:23.73:0,24,210	0/0:14,0:14:14.36:0,14,112	0/0:8,0:8:17.73:0,18,118	0/0:15,0:14:24.01:0,24,217	1/1:12,0:12:33.01:304,33,0	1/1:8,1:9:11.99:101,12,0	1/1:26,0:25:50.86:437,51,0	1/1:13,0:12:20.98:177,21,0	0/0:13,0:13:9.97:0,10,93	0/0:16,0:16:25.79:0,26,211	1/1:14,0:14:35.98:335,36,0	0/0:24,0:24:46.68:0,47,400	1/1:11,1:12:32.94:300,33,0	0/0:13,0:12:1.44:0,1,79
chr10	37423014	.	A	AGTGTGTGTGTGTGT	4852.45	PASS	AB=0.978;AC=45;AF=0.865;AN=52;BaseQRankSum=-1.684;DP=546;FS=1.355;HRun=0;HaplotypeScore=217.2238;InbreedingCoeff=0.1676;MQ=65.82;MQ0=17;MQRankSum=-1.956;QD=9.72;ReadPosRankSum=-1.231;VQSLOD=3.7311;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:32,6:35:0:0,0,1	1/1:13,0:11:3.48:48,3,0	./.	./.	0/1:13,0:12:0:0,0,0	1/1:22,0:19:3:103,3,0	1/1:38,0:35:18.31:202,18,0	1/1:29,0:26:17.83:368,18,0	1/1:15,0:11:5.89:144,6,0	1/1:15,0:13:24:648,24,0	1/1:18,0:15:1.98:44,2,0	1/1:19,0:20:11.91:213,12,0	1/1:9,0:9:9.02:293,9,0	1/1:12,0:11:2.57:72,3,0	1/1:23,0:21:9.02:221,9,0	1/1:18,0:18:14.49:359,14,0	0/1:9,0:9:0:0,0,0	1/1:19,0:16:12.04:486,12,0	1/1:14,0:12:6.02:252,6,0	0/1:11,0:10:0:0,0,0	1/1:27,0:26:2.99:23,3,0	0/1:17,0:16:0.20:0,0,0	1/1:19,0:18:5.75:64,6,0	1/1:18,0:17:2.27:45,2,0	1/1:19,0:18:11.81:206,12,0	0/1:24,0:24:99:135,0,153	1/1:22,0:21:28.91:910,29,0	0/1:16,0:15:16.83:17,0,258
chr10	37423052	.	TGAGAGAGAGA	T	946.30	PASS	AB=0.947;AC=18;AF=0.346;AN=52;BaseQRankSum=1.503;DP=471;FS=34.253;HRun=0;HaplotypeScore=160.2675;InbreedingCoeff=0.2799;MQ=37.64;MQ0=27;MQRankSum=0.010;QD=5.50;ReadPosRankSum=-0.738;VQSLOD=0.8213;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:33:23.20:0,23,688	1/1:7,0:5:1.06:9,1,0	./.	./.	1/1:11,1:11:9.02:157,9,0	0/0:18,0:14:10.18:0,10,385	0/0:35,0:30:18.93:0,19,515	0/0:23,0:20:12.51:0,13,181	1/1:14,2:12:8.86:189,9,0	0/0:22,0:19:36.10:0,36,1002	0/0:19,0:16:6.49:0,6,115	0/0:19,0:19:6.49:0,6,256	0/0:10,0:10:17.71:0,18,261	0/0:17,0:14:17.54:0,18,242	0/0:25,0:20:21.95:0,22,536	0/1:16,1:17:82.92:83,0,114	1/1:8,4:12:8.99:180,9,0	0/0:11,0:8:15.05:0,15,545	1/1:11,2:10:5.99:129,6,0	0/1:11,0:11:85.61:86,0,123	1/1:18,0:16:3.89:28,4,0	0/1:15,0:14:47.89:87,0,48	0/0:22,0:21:8.19:0,8,308	0/0:19,0:17:17.75:0,18,686	0/1:12,0:12:14.79:15,0,290	0/1:16,0:15:94.81:95,0,107	0/0:19,0:19:0.28:0,0,266	0/1:18,0:17:54.20:54,0,112
chr10	37426541	.	CT	C	2792.25	PASS	AB=0.698;AC=38;AF=0.679;AN=56;BaseQRankSum=-1.961;DP=549;FS=0.000;HRun=16;HaplotypeScore=64.4955;InbreedingCoeff=0.1599;MQ=65.66;MQ0=25;MQRankSum=1.193;QD=5.79;ReadPosRankSum=3.537;VQSLOD=2.5335;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:10,18:30:40.65:210,0,41	1/1:1,3:4:2.88:18,3,0	0/1:25,1:13:5.92:6,0,50	0/0:20,1:13:5.73:0,6,35	1/1:11,15:28:11.99:178,12,0	1/1:7,18:23:40.21:239,40,0	1/1:8,9:19:18.44:95,18,0	0/1:17,8:25:24.35:83,0,24	0/1:7,4:11:12.10:27,0,12	1/1:9,15:24:18.88:225,19,0	0/1:9,9:17:3.20:89,0,3	0/0:13,0:17:32.58:0,33,228	0/1:6,7:15:26.51:66,0,27	1/1:17,6:21:34.35:206,34,0	1/1:6,7:14:16.56:95,17,0	0/1:6,5:10:13.51:42,0,14	0/1:15,21:37:21.57:210,0,22	1/1:9,10:18:8.26:114,8,0	1/1:4,7:12:17.12:93,17,0	1/1:10,13:23:11.97:178,12,0	1/1:3,3:10:10.83:59,11,0	0/1:7,7:14:9.31:59,0,9	0/0:12,0:17:14.51:0,15,90	0/0:10,0:8:11.82:0,12,86	1/1:9,13:21:28.31:167,28,0	1/1:8,19:28:51.53:302,52,0	0/1:11,10:19:23.96:99,0,24	1/1:2,7:12:20.75:107,21,0
chr10	37426657	.	TTTTA	T	6367.94	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=12.286;DP=439;FS=10.146;HRun=0;HaplotypeScore=77.7148;InbreedingCoeff=0.9908;MQ=68.10;MQ0=1;MQRankSum=-3.848;QD=44.53;ReadPosRankSum=1.343;VQSLOD=5.0326;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,129,3345	1/1:0,4:4:12.04:225,12,0	0/0:12,0:9:26.92:0,27,572	0/0:21,0:18:48.13:0,48,1033	0/0:14,0:14:42.14:0,42,1093	0/0:17,0:17:48.16:0,48,1250	0/0:24,0:24:69.24:0,69,1789	1/1:3,17:20:42.14:786,42,0	0/0:9,0:9:27.09:0,27,709	0/0:16,0:16:48.16:0,48,1264	0/0:17,0:17:51.17:0,51,1295	0/0:10,0:10:27.09:0,27,710	1/1:2,8:10:18.06:336,18,0	1/1:4,15:19:42.14:786,42,0	0/0:13,0:13:39.12:0,39,947	0/0:12,0:12:36.11:0,36,893	0/0:25,0:25:69.21:0,69,1741	0/0:12,0:12:36.12:0,36,909	1/1:2,9:11:27.08:475,27,0	1/1:1,15:16:45.15:822,45,0	1/1:0,14:14:39.13:730,39,0	1/1:0,12:12:30.10:561,30,0	0/0:13,0:13:36.12:0,36,924	0/0:15,0:15:36.12:0,36,947	1/1:0,11:11:24.08:449,24,0	0/0:16,0:16:48.16:0,48,1228	1/1:1,25:26:66.18:1198,66,0	0/0:5,0:5:15.05:0,15,384
chr10	37428443	.	C	CGT	2613.20	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-9.147;DP=794;FS=2.319;HRun=0;HaplotypeScore=96.5454;InbreedingCoeff=0.9996;MQ=70.07;MQ0=0;MQRankSum=-2.164;QD=36.81;ReadPosRankSum=1.476;VQSLOD=5.4827;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,123,1534	0/0:21,0:21:54.17:0,54,686	0/0:37,0:35:60.42:0,60,695	0/0:42,0:40:58.48:0,58,956	0/0:30,0:30:72.19:0,72,897	0/0:32,0:32:78.25:0,78,992	0/0:32,0:32:90.29:0,90,1144	0/0:34,0:34:78.23:0,78,959	0/0:30,0:30:90.29:0,90,1144	0/0:36,0:36:90.28:0,90,1134	0/0:21,0:21:48.14:0,48,598	1/1:1,21:24:48.16:803,48,0	0/0:29,0:30:87.09:0,87,1068	0/0:22,0:22:54.17:0,54,687	0/0:35,0:35:90.27:0,90,1132	0/0:20,0:20:57.18:0,57,726	0/0:33,0:33:40.85:0,41,952	0/0:19,0:19:51.12:0,51,631	0/0:12,0:12:27.09:0,27,342	0/0:18,0:18:51.16:0,51,649	0/0:47,0:47:99:0,132,1676	0/0:19,0:19:48.14:0,48,597	1/1:3,18:21:48.16:803,48,0	1/1:3,23:26:69.24:1150,69,0	0/0:22,0:22:57.18:0,57,723	0/0:21,0:21:51.15:0,51,638	0/0:32,0:32:78.25:0,78,992	0/0:28,0:28:75.24:0,75,954
chr10	37428818	.	CT	C	15677.17	PASS	AB=0.912;AC=54;AF=0.964;AN=56;BaseQRankSum=-5.681;DP=589;FS=11.062;HRun=4;HaplotypeScore=88.5405;InbreedingCoeff=-0.0218;MQ=66.47;MQ0=9;MQRankSum=-3.258;QD=26.62;ReadPosRankSum=4.806;VQSLOD=3.4983;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,19:21:45.61:546,46,0	1/1:0,13:13:36.11:432,36,0	0/1:30,5:14:82.32:82,0,137	0/1:35,1:16:17.57:18,0,92	1/1:2,32:34:83.71:1006,84,0	1/1:1,22:23:57.17:684,57,0	1/1:0,21:21:60.18:720,60,0	1/1:5,10:15:30.09:360,30,0	1/1:2,12:14:36.10:421,36,0	1/1:3,34:37:99:1197,102,0	1/1:0,20:20:51.16:612,51,0	1/1:0,18:18:54.17:648,54,0	1/1:2,21:23:60.16:704,60,0	1/1:0,19:19:54.17:647,54,0	1/1:2,18:20:54.17:647,54,0	1/1:0,11:11:30.09:360,30,0	1/1:2,22:24:60.18:720,60,0	1/1:1,20:20:57.17:684,57,0	1/1:3,13:13:33.10:396,33,0	1/1:4,22:26:48.12:580,48,0	1/1:1,28:29:72.22:868,72,0	1/1:2,25:27:66.20:792,66,0	1/1:1,19:20:42.13:504,42,0	1/1:2,21:23:57.17:683,57,0	1/1:1,7:7:21.06:252,21,0	1/1:2,20:22:60.18:719,60,0	1/1:1,4:5:12.04:144,12,0	1/1:0,7:7:21.06:252,21,0
chr10	37428876	.	TTTC	T	7327.10	PASS	AB=0.932;AC=26;AF=0.464;AN=56;BaseQRankSum=-7.428;DP=593;FS=3.916;HRun=0;HaplotypeScore=139.4546;InbreedingCoeff=0.7392;MQ=53.76;MQ0=18;MQRankSum=0.734;QD=23.94;ReadPosRankSum=-0.017;VQSLOD=4.4794;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,13:27:66.14:932,66,0	0/0:7,0:10:21.06:0,21,260	0/0:39,0:8:14.53:0,15,235	0/0:32,0:19:18.29:0,18,460	1/1:14,10:24:50.44:714,50,0	1/1:11,6:17:33.11:475,33,0	1/1:10,14:23:57.11:775,57,0	0/0:29,0:27:6.30:0,6,117	1/1:12,11:23:60.19:841,60,0	1/1:17,11:27:48.16:686,48,0	1/1:5,10:15:33.09:456,33,0	0/0:11,0:13:23.54:0,24,244	0/0:12,0:17:8.26:0,8,284	0/0:15,0:24:17.09:0,17,418	1/1:9,8:17:42.14:601,42,0	1/1:7,9:16:42.14:597,42,0	1/1:19,8:27:59.98:803,60,0	1/1:10,6:15:33.03:409,33,0	0/1:19,0:17:7.28:7,0,205	0/0:17,0:20:22.30:0,22,345	0/1:16,0:20:0.49:0,0,279	0/0:12,0:16:20.14:0,20,319	0/0:16,0:20:27.83:0,28,339	0/0:23,0:39:66.23:0,66,797	0/0:11,0:16:14.63:0,15,258	0/1:24,0:26:24.91:25,0,205	0/0:7,0:11:22.57:0,23,271	0/1:3,0:4:6.39:6,0,17
chr10	37428895	.	TTTC	T	1712.72	PASS	AB=0.837;AC=13;AF=0.232;AN=56;BaseQRankSum=3.041;DP=601;FS=20.409;HRun=0;HaplotypeScore=146.9874;InbreedingCoeff=-0.2843;MQ=52.25;MQ0=11;MQRankSum=-7.402;QD=6.85;ReadPosRankSum=-5.312;VQSLOD=-0.2883;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:14.60:0,15,183	0/0:11,0:11:30.10:0,30,460	0/0:50,0:14:36.01:0,36,501	0/0:35,0:15:26.53:0,27,736	0/0:25,0:25:22.85:0,23,355	0/0:18,0:18:19.85:0,20,328	0/0:28,0:27:66.04:0,66,511	0/1:12,10:21:99:273,0,357	0/0:27,0:27:28.88:0,29,473	0/0:25,0:24:39.03:0,39,491	0/1:13,0:13:2.49:2,0,93	0/1:7,3:10:88.80:89,0,215	0/1:16,4:20:99:117,0,652	0/1:13,7:20:99:314,0,309	0/0:19,0:19:22.27:0,22,252	0/1:18,0:18:0.06:0,0,170	0/0:26,0:26:11.10:0,11,271	0/0:14,0:13:29.10:0,29,211	0/1:17,4:15:99:215,0,216	0/1:15,3:18:99:133,0,483	0/1:17,4:21:99:195,0,516	0/1:8,4:12:64.51:65,0,348	0/1:12,6:18:99:173,0,485	0/1:35,2:37:99:184,0,1065	0/1:17,3:20:98.83:99,0,672	0/0:29,0:29:84.04:0,84,1517	0/0:14,0:14:20.81:0,21,543	0/0:3,0:3:9:0,9,134
chr10	37429183	.	ATT	A	3973.40	PASS	AB=0.686;AC=30;AF=0.536;AN=56;BaseQRankSum=6.628;DP=535;FS=5.148;HRun=15;HaplotypeScore=84.0020;InbreedingCoeff=0.7163;MQ=73.27;MQ0=1;MQRankSum=-1.538;QD=13.20;ReadPosRankSum=3.417;VQSLOD=3.0562;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:25:41.60:0,42,509	1/1:1,10:11:17.13:152,17,0	0/0:23,0:14:5.61:0,6,131	0/1:15,2:15:24.20:24,0,182	0/0:27,0:32:83.62:0,84,1004	0/0:24,0:26:74.25:0,74,875	0/0:10,0:12:29.58:0,30,371	1/1:7,19:27:47.64:459,48,0	0/0:21,0:22:56.59:0,57,672	0/0:17,0:19:47.59:0,48,555	0/0:15,0:16:41.50:0,42,446	1/1:2,0:11:19.16:82,19,0	1/1:1,12:15:34.59:286,35,0	1/1:9,10:20:35.34:287,35,0	0/0:13,0:15:38.61:0,39,484	0/0:11,0:15:32.59:0,33,402	0/0:22,0:28:72.10:0,72,787	0/1:4,2:17:21.91:22,0,55	0/1:6,6:15:36.32:171,0,36	1/1:6,17:27:47.16:480,47,0	1/1:1,9:10:14.99:132,15,0	1/1:3,8:13:23.63:190,24,0	1/1:1,1:23:45.17:211,45,0	1/1:3,0:15:27.62:126,28,0	1/1:2,15:20:40.43:383,40,0	0/1:11,9:23:2.67:235,0,3	1/1:6,21:30:71.05:589,71,0	1/1:1,5:7:17.73:144,18,0
chr10	37429917	.	C	CTG	7894.51	PASS	AB=0.687;AC=18;AF=0.321;AN=56;BaseQRankSum=-16.069;DP=866;FS=1.867;HRun=0;HaplotypeScore=109.0009;InbreedingCoeff=0.6817;MQ=67.88;MQ0=2;MQRankSum=0.305;QD=24.29;ReadPosRankSum=1.896;VQSLOD=5.8843;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:75.46:0,75,1127	0/1:4,10:15:46.17:298,0,46	0/0:43,0:35:63.04:0,63,681	0/0:36,0:23:48.05:0,48,534	0/0:29,0:29:59.40:0,59,703	0/0:21,0:24:53.61:0,54,552	0/0:29,0:30:69.03:0,69,807	0/1:16,16:32:42.74:581,0,43	0/0:31,0:32:75.02:0,75,856	0/0:34,0:35:83.91:0,84,969	0/0:13,0:15:38.79:0,39,431	0/0:43,0:43:86.90:0,87,1000	1/1:11,21:32:33.41:848,33,0	1/1:7,22:29:14.54:729,15,0	0/0:22,0:25:62.67:0,63,687	0/0:22,0:22:54.16:0,54,647	0/0:37,0:38:84.95:0,85,990	0/1:22,1:23:11.47:11,0,389	1/1:13,19:32:31.15:750,31,0	1/1:8,13:22:21.95:521,22,0	1/1:16,50:68:99:1787,106,0	1/1:5,18:23:45.15:730,45,0	0/0:16,0:17:32.90:0,33,380	0/0:45,0:45:99:0,114,1340	0/1:5,25:30:10.04:861,0,10	0/0:38,0:38:96.28:0,96,1143	1/1:2,17:19:48.16:778,48,0	0/0:20,0:22:56.82:0,57,638
chr10	37431953	.	T	TAG	12718.80	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-16.262;DP=584;FS=0.000;HRun=0;HaplotypeScore=63.8550;InbreedingCoeff=0.9971;MQ=84.36;MQ0=1;MQRankSum=-3.342;QD=50.67;ReadPosRankSum=1.898;VQSLOD=5.9225;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:60.20:0,60,877	1/1:1,8:8:15.05:280,15,0	0/0:22,0:22:57.18:0,57,806	0/0:19,0:19:53.39:0,53,727	0/0:30,0:30:84.27:0,84,1211	0/0:23,0:23:66.22:0,66,972	0/0:11,0:11:33.11:0,33,486	1/1:1,39:40:99:2089,114,0	0/0:21,0:21:63.20:0,63,904	0/0:33,0:34:99:0,99,1438	0/0:18,0:18:51.17:0,51,750	0/0:18,0:18:54.18:0,54,794	1/1:3,19:22:57.20:1064,57,0	1/1:0,19:19:48.16:899,48,0	0/0:22,0:22:66.21:0,66,953	0/0:16,0:16:45.14:0,45,643	0/0:20,0:20:60.20:0,60,883	0/0:28,0:28:84.26:0,84,1214	1/1:2,18:20:57.20:1050,57,0	1/1:0,20:20:57.20:1063,57,0	1/1:0,17:17:51.17:955,51,0	1/1:0,9:9:21.07:393,21,0	0/0:20,0:20:57.19:0,57,829	0/0:11,0:11:30.04:0,30,395	1/1:1,20:21:60.21:1122,60,0	1/1:0,27:26:78.27:1446,78,0	1/1:1,26:27:75.26:1404,75,0	1/1:0,19:20:51.17:954,51,0
chr10	37434707	.	AC	A	7344.10	PASS	AB=0.846;AC=33;AF=0.589;AN=56;BaseQRankSum=-8.212;DP=509;FS=7.470;HRun=9;HaplotypeScore=65.6207;InbreedingCoeff=0.6321;MQ=77.95;MQ0=0;MQRankSum=-5.029;QD=19.58;ReadPosRankSum=8.349;VQSLOD=4.2444;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:11,32:43:99:929,105,0	0/0:3,0:3:3.63:0,4,14	0/0:17,0:17:42.11:0,42,470	0/0:27,0:26:44.90:0,45,460	1/1:11,18:29:60.02:547,60,0	1/1:5,12:17:42.02:383,42,0	1/1:5,25:30:66.03:604,66,0	0/0:15,0:16:14.54:0,15,121	1/1:4,19:23:60.03:548,60,0	1/1:4,19:23:57.01:516,57,0	1/1:2,11:13:35.86:316,36,0	1/1:4,16:20:22.72:452,23,0	0/0:8,0:14:1.27:0,1,4	0/1:8,0:9:0.27:0,0,40	1/1:1,22:23:63.03:577,63,0	1/1:3,20:23:54.03:494,54,0	1/1:2,31:33:93.05:850,93,0	1/1:0,13:13:36.02:329,36,0	0/0:11,0:11:8.95:0,9,69	0/0:9,0:9:1.01:0,1,25	0/0:15,0:15:4.41:0,4,27	0/0:9,0:9:5.18:0,5,29	1/1:3,13:17:43.96:379,44,0	0/1:3,18:21:15.20:385,0,15	0/0:12,0:12:2.79:0,3,24	1/1:9,0:9:2.76:14,3,0	0/1:23,0:23:3.69:4,0,229	1/1:6,0:6:3.37:17,3,0
chr10	37434716	.	CT	C	1738.83	PASS	AB=1.000;AC=39;AF=0.696;AN=56;BaseQRankSum=3.150;DP=510;FS=0.536;HRun=1;HaplotypeScore=81.2964;InbreedingCoeff=-0.0789;MQ=79.25;MQ0=0;MQRankSum=-4.263;QD=3.72;ReadPosRankSum=6.856;VQSLOD=0.1284;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:46,0:46:24.48:24,0,145	1/1:4,0:4:10.90:66,11,0	0/0:17,0:17:50.99:0,51,593	0/0:24,1:24:49:0,49,691	0/1:27,0:27:27.28:42,0,27	0/1:16,0:16:1.97:28,0,2	0/1:29,0:29:15.74:16,0,74	1/1:14,0:14:18.11:133,18,0	0/1:24,0:24:35.82:36,0,43	0/1:26,0:26:12.96:13,0,142	0/1:14,0:14:8.83:9,0,31	0/1:23,0:23:25.02:25,0,87	1/1:14,0:14:20.91:164,21,0	1/1:9,1:10:19.27:142,19,0	0/1:26,0:26:22.04:22,0,72	0/1:22,0:22:17.34:17,0,33	0/1:36,0:36:44.35:44,0,48	0/1:15,0:15:8.35:8,0,31	1/1:8,1:9:11.41:69,11,0	1/1:6,0:6:9.80:68,10,0	1/1:15,0:14:15.46:112,15,0	1/1:7,0:7:15.74:115,16,0	1/1:15,1:16:4.05:59,4,0	0/1:23,0:23:18.49:18,0,121	1/1:8,0:8:12.41:96,12,0	1/1:0,9:9:20.96:185,21,0	1/1:22,1:23:34.97:337,35,0	1/1:0,6:6:5.95:60,6,0
chr10	37436781	.	GGAGAGAGAGAGAGA	G	1594.69	PASS	AB=0.900;AC=18;AF=0.346;AN=52;BaseQRankSum=4.993;DP=531;FS=32.666;HRun=0;HaplotypeScore=195.4147;InbreedingCoeff=0.4189;MQ=72.09;MQ0=17;MQRankSum=-3.812;QD=6.79;ReadPosRankSum=-0.929;VQSLOD=1.0251;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:28,1:31:3.01:98,3,0	0/0:7,0:7:3.90:0,4,121	0/0:21,0:14:0:0,0,0	./.	0/0:14,0:19:2.84:0,3,8	1/1:14,2:16:6.02:193,6,0	1/1:31,0:31:8.97:110,9,0	0/0:20,0:18:0.89:0,1,2	0/1:18,0:16:17.95:49,0,18	1/1:15,1:16:3.01:117,3,0	1/1:11,2:13:3.01:117,3,0	0/1:12,0:14:26.33:26,0,58	0/0:14,0:14:12.04:0,12,445	0/0:13,0:15:18.06:0,18,720	1/1:18,12:31:18.06:681,18,0	0/1:14,0:13:0:0,0,0	0/1:18,2:29:8.94:241,0,9	1/1:15,6:21:3.01:117,3,0	0/0:10,0:10:3.01:0,3,103	0/0:14,0:16:12.04:0,12,518	0/0:25,0:25:33.11:0,33,1491	0/0:5,0:5:2.99:0,3,23	./.	0/0:18,0:19:18.03:0,18,378	0/0:13,0:11:6.02:0,6,328	0/0:23,0:22:39.12:0,39,1124	0/0:21,0:21:21.07:0,21,634	0/0:19,0:18:18.89:0,19,449
chr10	37436997	.	GA	G	313.36	PASS	AC=6;AF=0.111;AN=54;BaseQRankSum=2.755;DP=551;FS=3.344;HRun=12;HaplotypeScore=82.3797;InbreedingCoeff=0.7937;MQ=51.36;MQ0=21;MQRankSum=1.217;QD=4.97;ReadPosRankSum=3.407;VQSLOD=2.1717;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:37:47.28:0,47,550	0/0:16,0:16:27.03:0,27,259	./.	0/0:21,1:6:8.40:0,8,55	0/0:19,0:18:14.81:0,15,220	0/0:17,0:17:16.40:0,16,244	0/0:19,0:18:35.91:0,36,328	0/0:16,0:18:29.82:0,30,267	1/1:24,1:21:5.45:117,5,0	0/0:22,0:23:34.13:0,34,271	0/0:26,0:25:27.33:0,27,241	0/0:9,0:9:3.68:0,4,42	0/0:14,0:13:18:0,18,167	0/0:21,0:21:27.04:0,27,267	0/0:10,0:11:14.80:0,15,117	0/0:10,0:9:12.02:0,12,121	0/0:38,0:37:17.72:0,18,409	0/0:12,0:13:22.79:0,23,268	0/0:16,0:14:21.04:0,21,212	0/0:19,0:20:43.11:0,43,401	0/0:13,0:13:33.03:0,33,320	0/0:26,0:27:66.36:0,66,637	0/0:22,0:22:8.70:0,9,97	0/0:16,0:16:6.72:0,7,85	0/0:22,1:23:23.27:0,23,300	1/1:10,13:21:29.81:231,30,0	0/0:17,2:18:33.03:0,33,315	1/1:7,8:13:12.38:94,12,0
chr10	37436999	.	AAAAAAAAAAAG	A	436.13	PASS	AC=6;AF=0.111;AN=54;BaseQRankSum=3.759;DP=552;FS=9.251;HRun=0;HaplotypeScore=159.9147;InbreedingCoeff=0.7675;MQ=52.27;MQ0=20;MQRankSum=-3.103;QD=10.14;ReadPosRankSum=-0.590;VQSLOD=2.1231;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:38:69.15:0,69,2455	0/0:14,0:14:33.07:0,33,1258	./.	0/0:23,0:8:15.04:0,15,325	0/0:19,0:18:30.06:0,30,904	0/0:16,0:16:33.10:0,33,1211	0/0:19,0:18:38.61:0,39,1248	0/0:20,0:20:30.99:0,31,1296	0/0:26,0:21:44.61:0,45,1017	0/0:23,0:22:41.26:0,41,829	0/0:26,0:25:7.66:0,8,800	1/1:2,7:9:6.02:128,6,0	0/0:12,0:11:18.06:0,18,681	0/0:21,0:21:34:0,34,1472	0/0:11,0:11:9.03:0,9,347	0/0:11,0:10:3.01:0,3,96	0/0:40,0:39:47.99:0,48,1615	0/0:15,0:15:30.10:0,30,1058	0/0:15,0:13:36.12:0,36,1159	0/0:20,0:20:45.15:0,45,1549	0/0:14,0:14:28.34:0,28,1301	0/0:27,0:27:60.20:0,60,2596	1/1:7,12:19:20.12:338,20,0	1/1:6,9:15:2.07:90,2,0	0/0:23,0:23:51.18:0,51,2298	0/0:24,0:22:39.13:0,39,1410	0/0:17,0:16:30.10:0,30,1264	0/0:16,0:14:18.06:0,18,525
chr10	37437010	.	G	GA	3131.43	PASS	AB=0.784;AC=22;AF=0.393;AN=56;BaseQRankSum=-1.079;DP=600;FS=2.971;HRun=12;HaplotypeScore=73.2380;InbreedingCoeff=0.5150;MQ=54.38;MQ0=17;MQRankSum=0.734;QD=10.04;ReadPosRankSum=1.410;VQSLOD=3.2727;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:9,32:39:18.85:436,0,19	0/0:13,0:13:32.94:0,33,270	0/0:28,0:5:3.76:0,4,10	0/1:32,0:10:29.38:29,0,31	1/1:7,18:25:44.89:429,45,0	1/1:5,10:15:23.76:255,24,0	1/1:4,14:18:30.45:328,30,0	0/0:28,0:28:18.23:0,18,321	1/1:27,1:24:50.85:406,51,0	0/1:5,16:20:16.99:265,0,17	0/1:7,18:25:7.68:268,0,8	0/1:9,0:9:2.11:14,0,2	0/0:10,0:9:26.94:0,27,218	0/0:21,0:21:45.62:0,46,369	1/1:7,2:9:17.63:168,18,0	1/1:4,5:8:3.01:32,3,0	1/1:6,36:41:42.10:443,42,0	1/1:5,14:19:5.50:237,5,0	0/0:25,0:23:29.51:0,30,413	0/0:19,0:20:46.89:0,47,363	0/0:16,0:16:36.98:0,37,282	0/0:29,0:29:62.56:0,63,509	0/1:16,0:16:5.05:15,0,5	0/0:15,0:15:3:0,3,10	0/0:20,0:20:56.92:0,57,464	0/0:27,0:25:59.72:0,60,483	0/0:17,0:16:38.28:0,38,296	0/0:18,0:17:4.89:0,5,204
chr10	37437575	.	AGTGTGTGTGTGTGTGTGTGT	A	887.78	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=4.347;DP=656;FS=17.696;HRun=0;HaplotypeScore=290.1363;InbreedingCoeff=0.6787;MQ=62.81;MQ0=19;MQRankSum=-2.399;QD=12.16;ReadPosRankSum=-1.493;VQSLOD=0.9741;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:30.08:0,30,722	0/0:6,0:6:15.05:0,15,731	1/1:36,0:18:2.74:12,3,0	0/0:48,0:28:3.01:0,3,34	0/0:16,0:16:29.99:0,30,620	0/0:11,0:12:15.05:0,15,425	0/0:28,0:26:35.48:0,35,990	0/0:26,0:25:27:0,27,591	0/0:20,0:25:34.36:0,34,933	0/0:24,0:26:32.10:0,32,793	0/0:10,0:12:15.05:0,15,394	1/1:14,12:27:20.99:832,21,0	0/0:8,0:8:15.05:0,15,708	0/0:23,0:22:33.58:0,34,1796	0/0:18,0:25:17.21:0,17,465	0/0:21,0:24:30.09:0,30,834	0/0:36,0:41:16.26:0,16,934	0/0:20,0:18:24.54:0,25,386	0/0:13,0:13:13.18:0,13,357	0/0:11,0:10:6.02:0,6,310	0/0:63,0:65:54.19:0,54,2002	0/0:22,0:22:39.11:0,39,2027	1/1:8,1:8:3.01:159,3,0	0/0:11,10:21:2.99:0,3,24	0/0:18,0:17:15.02:0,15,666	0/0:23,0:24:45.15:0,45,1415	0/0:22,0:22:41.98:0,42,2849	0/0:16,0:15:15.05:0,15,492
chr10	37438775	.	CAT	C	968.03	PASS	AB=0.855;AC=6;AF=0.107;AN=56;BaseQRankSum=2.417;DP=606;FS=0.000;HRun=0;HaplotypeScore=106.6524;InbreedingCoeff=0.1839;MQ=54.77;MQ0=24;MQRankSum=-0.964;QD=7.39;ReadPosRankSum=-0.947;VQSLOD=3.0154;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,1:39:24.07:0,24,383	0/0:6,0:6:15.05:0,15,304	0/0:39,1:11:10.09:0,10,245	0/1:68,2:19:4.65:5,0,414	0/0:16,0:16:27.09:0,27,389	0/0:12,0:12:27.09:0,27,435	0/0:15,0:14:36.10:0,36,612	0/0:27,0:25:72.17:0,72,1305	0/0:17,0:17:9.03:0,9,142	0/0:25,0:25:60.20:0,60,979	0/0:17,0:17:21.07:0,21,292	0/1:14,4:18:96.32:243,0,96	0/0:20,0:20:57.17:0,57,1053	0/0:20,1:21:51.17:0,51,1015	0/0:17,0:17:45.15:0,45,723	0/0:18,0:18:48.15:0,48,785	0/0:20,1:20:0.42:0,0,563	0/0:22,0:22:3.55:0,4,363	0/0:16,0:15:37.67:0,38,777	0/0:24,0:24:48.04:0,48,890	0/0:21,0:20:45.15:0,45,829	0/0:23,0:23:54.19:0,54,1088	0/0:5,7:12:9.03:0,9,177	0/1:15,0:14:24.05:361,0,24	0/0:24,0:22:63.08:0,63,1209	0/1:9,9:18:99:325,0,413	0/0:21,0:21:61.43:0,61,1185	1/1:5,2:7:15.01:157,15,0
chr10	37438785	.	CAT	C	2719.74	PASS	AB=0.826;AC=14;AF=0.259;AN=54;BaseQRankSum=2.144;DP=599;FS=9.395;HRun=0;HaplotypeScore=99.7881;InbreedingCoeff=-0.1023;MQ=51.24;MQ0=30;MQRankSum=3.356;QD=12.36;ReadPosRankSum=0.508;VQSLOD=2.9750;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:8,34:41:11.96:0,12,110	0/0:6,0:6:18.06:0,18,257	0/0:46,0:12:17.06:0,17,236	0/0:82,0:15:26.93:0,27,379	0/1:5,12:15:24.51:25,0,42	0/1:9,1:10:12.49:190,0,12	0/1:13,0:12:82.39:270,0,82	0/0:28,0:25:65.98:0,66,640	0/1:2,16:18:23.97:33,0,24	0/1:22,1:23:88.06:509,0,88	0/1:16,1:17:0:0,0,0	0/1:11,4:15:77.68:112,0,78	0/0:17,0:17:48.06:0,48,572	0/0:19,0:19:48.09:0,48,675	0/1:13,2:15:26.82:319,0,27	0/1:19,2:20:77.03:393,0,77	0/1:21,1:21:26.98:316,0,27	0/1:3,14:17:41.12:87,0,41	0/0:18,0:16:37.43:0,37,496	0/0:26,0:26:37.38:0,37,533	0/0:15,0:15:26.92:0,27,368	0/0:24,0:24:49.76:0,50,761	0/0:10,0:10:11.91:0,12,102	1/1:15,0:14:10.74:313,11,0	0/0:22,1:22:59.69:0,60,954	0/1:15,2:17:99:306,0,208	0/0:19,1:20:40.25:0,40,804	./.
chr10	37438787	.	TTCTCTCTCTCCCTCTCTCTCTCTCTCTCTC	T	3436.61	PASS	AB=1.000;AC=32;AF=0.593;AN=54;BaseQRankSum=-2.319;DP=605;FS=2.157;HRun=0;HaplotypeScore=284.0132;InbreedingCoeff=-0.1742;MQ=50.93;MQ0=35;MQRankSum=2.976;QD=7.65;ReadPosRankSum=0.586;VQSLOD=2.4388;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:43,0:41:0:1,0,0	1/1:6,0:6:17.92:142,18,0	0/0:45,0:12:10.49:0,10,93	0/0:80,0:14:3.59:0,4,119	1/1:17,0:15:2.94:18,3,0	1/1:9,0:10:15.01:156,15,0	1/1:13,0:11:12:104,12,0	1/1:28,0:25:39.23:378,39,0	0/1:18,0:18:8.79:9,0,15	1/1:23,0:23:38.86:314,39,0	0/0:1,16:17:0.47:0,0,1	1/1:15,0:15:4.86:36,5,0	0/1:15,0:15:99:121,0,354	0/1:20,0:20:99:203,0,121	1/1:16,0:16:22.56:278,23,0	0/1:21,0:20:99:139,0,203	0/1:22,0:21:72.22:130,0,72	0/1:19,0:19:39.94:40,0,83	0/1:17,0:15:99:238,0,165	1/1:26,0:26:5.88:36,6,0	0/1:18,0:17:79.29:79,0,236	0/1:24,0:24:99:231,0,178	./.	0/1:16,0:15:43.60:163,0,44	0/1:23,0:22:22.10:276,0,22	0/1:17,0:17:62.32:121,0,62	0/1:22,0:20:99:223,0,336	0/0:4,0:4:3.01:0,3,56
chr10	37438796	.	TCC	T	4853.53	PASS	AB=1.000;AC=50;AF=0.893;AN=56;BaseQRankSum=-2.136;DP=562;FS=42.661;HRun=3;HaplotypeScore=88.5469;InbreedingCoeff=0.5389;MQ=49.41;MQ0=40;MQRankSum=2.520;QD=10.98;ReadPosRankSum=3.083;VQSLOD=-0.2899;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:36,0:34:8.99:75,9,0	1/1:6,0:6:17.92:143,18,0	0/0:43,0:12:8.19:0,8,90	0/0:77,0:14:2.34:0,2,119	1/1:16,0:13:5.94:43,6,0	1/1:9,0:9:11.85:94,12,0	1/1:10,0:8:12:103,12,0	1/1:26,0:24:67.42:449,67,0	1/1:20,0:20:5.78:40,6,0	1/1:19,0:18:38.90:324,39,0	0/1:17,0:17:0:0,0,0	1/1:11,0:11:9.31:57,9,0	1/1:16,0:16:38.83:308,39,0	1/1:19,0:19:38.57:314,39,0	1/1:16,0:16:16.02:150,16,0	1/1:19,0:18:36.32:286,36,0	1/1:22,0:22:19.81:261,20,0	1/1:14,0:14:7.36:112,7,0	1/1:14,0:13:21.72:289,22,0	1/1:2,21:22:5.90:37,6,0	1/1:19,0:17:7.39:160,7,0	1/1:24,0:24:44.18:359,44,0	0/1:8,0:8:0:0,0,0	1/1:19,0:17:9.77:175,10,0	1/1:18,0:17:41.87:344,42,0	1/1:14,0:13:37.04:275,37,0	1/1:22,0:20:53.90:443,54,0	1/1:4,0:3:2.88:15,3,0
chr10	37441401	.	T	TG	2241.67	PASS	AC=48;AF=0.923;AN=52;BaseQRankSum=-4.460;DP=158;FS=14.669;HRun=6;HaplotypeScore=20.2669;InbreedingCoeff=0.3842;MQ=84.11;MQ0=0;MQRankSum=-3.558;QD=16.85;ReadPosRankSum=0.990;VQSLOD=1.5593;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,3:5:6.02:75,6,0	./.	0/0:11,0:9:5.89:0,6,122	0/0:12,0:8:20.90:0,21,186	1/1:0,5:5:9.03:109,9,0	1/1:0,10:10:15.05:189,15,0	1/1:2,9:11:6.02:75,6,0	1/1:4,5:9:12.92:149,13,0	1/1:2,0:2:6.01:62,6,0	1/1:0,1:1:3.01:38,3,0	./.	1/1:0,4:4:9.03:113,9,0	1/1:5,0:5:9:85,9,0	1/1:2,2:4:6.02:75,6,0	1/1:1,4:5:6.02:75,6,0	1/1:0,4:4:6.02:75,6,0	1/1:2,7:9:9.03:113,9,0	1/1:1,5:6:6.02:75,6,0	1/1:3,2:5:11.81:111,12,0	1/1:1,4:5:12.04:147,12,0	1/1:3,10:13:15.05:189,15,0	1/1:0,1:1:3.01:38,3,0	1/1:6,0:6:5.94:75,6,0	1/1:4,1:5:3.01:38,3,0	1/1:1,2:3:6.02:74,6,0	1/1:0,3:3:9.03:113,9,0	1/1:1,6:7:9.03:113,9,0	1/1:1,4:5:12.04:151,12,0
chr10	37441928	.	AAAACAAAC	A	17157.93	PASS	AB=0.680;AC=51;AF=0.911;AN=56;BaseQRankSum=4.842;DP=653;FS=2.335;HRun=0;HaplotypeScore=163.9956;InbreedingCoeff=0.6889;MQ=54.88;MQ0=4;MQRankSum=-2.046;QD=29.13;ReadPosRankSum=5.291;VQSLOD=4.2083;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:20,23:43:48.08:1024,48,0	1/1:3,6:9:15.05:304,15,0	0/0:36,0:25:23.67:0,24,792	0/0:28,0:20:16.30:0,16,491	1/1:5,20:25:53.91:949,54,0	1/1:5,12:17:30.10:665,30,0	1/1:12,9:21:21.07:453,21,0	1/1:15,15:30:45.09:643,45,0	1/1:7,11:18:27.09:636,27,0	1/1:9,20:29:54.14:1182,54,0	1/1:12,19:31:45.07:950,45,0	1/1:4,9:13:12.04:303,12,0	1/1:7,22:29:48.16:1182,48,0	1/1:9,11:20:21.07:531,21,0	1/1:8,23:31:48.16:1136,48,0	1/1:11,13:24:21.07:515,21,0	1/1:4,14:18:30.01:646,30,0	0/1:9,7:17:1.92:266,0,2	1/1:12,6:18:18.06:424,18,0	1/1:9,18:27:48:973,48,0	1/1:13,14:27:1.25:73,1,0	1/1:8,14:22:39.13:905,39,0	1/1:3,16:20:42.10:786,42,0	1/1:11,20:31:23.75:476,24,0	1/1:5,10:15:24.08:567,24,0	1/1:7,10:17:30.07:679,30,0	1/1:10,17:27:36.08:814,36,0	1/1:5,4:9:3.01:76,3,0
chr10	37442377	.	A	AAGT	458.80	PASS	AB=0.777;AC=18;AF=0.321;AN=56;BaseQRankSum=4.616;DP=639;FS=20.937;HRun=0;HaplotypeScore=137.3838;InbreedingCoeff=-0.2973;MQ=67.61;MQ0=14;MQRankSum=2.597;QD=1.15;ReadPosRankSum=-2.672;VQSLOD=0.7972;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:4,0:34:36.01:36,0,88	0/0:10,0:10:1.92:0,2,119	0/0:25,0:18:51.15:0,51,872	0/0:29,0:13:29.18:0,29,531	0/1:8,0:30:32.12:93,0,32	0/0:20,0:21:12.76:0,13,340	0/1:8,0:31:34.95:35,0,65	0/0:28,0:27:40.01:0,40,272	0/1:8,1:25:7.01:55,0,7	0/1:27,0:26:47.42:47,0,143	0/1:1,0:13:8.48:8,0,41	0/1:13,0:14:9.42:9,0,77	0/0:19,0:19:15.44:0,15,253	0/1:20,0:20:5.88:6,0,291	0/1:6,0:22:22.11:22,0,105	1/1:4,0:20:6.01:64,6,0	0/1:26,0:25:21.05:21,0,135	0/1:8,0:20:50.49:50,0,75	0/1:22,0:21:11.07:11,0,170	0/1:4,0:26:6.58:7,0,82	0/0:15,0:14:34.16:0,34,196	0/0:14,0:14:34.92:0,35,232	0/1:22,0:23:99:113,0,107	0/0:40,0:41:9.37:0,9,247	0/1:21,0:20:30.92:31,0,199	0/0:25,0:25:74.70:0,75,1067	0/1:26,0:24:4.49:4,0,278	0/0:12,0:11:31.25:0,31,469
chr10	37443909	.	GA	G	2564.92	PASS	AB=0.672;AC=34;AF=0.607;AN=56;BaseQRankSum=-4.003;DP=437;FS=1.069;HRun=14;HaplotypeScore=55.6342;InbreedingCoeff=0.0676;MQ=53.77;MQ0=5;MQRankSum=1.048;QD=7.25;ReadPosRankSum=4.680;VQSLOD=2.3972;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:11,16:28:39.92:188,0,40	0/1:3,10:14:16.18:139,0,16	0/1:10,0:6:11.19:11,0,64	0/0:7,0:5:3.10:0,3,32	1/1:5,11:16:8.39:144,8,0	0/1:5,4:9:16.88:36,0,17	0/1:7,9:17:29.89:103,0,30	0/1:12,17:29:23.19:220,0,23	1/1:4,8:13:19.82:129,20,0	1/1:3,14:18:34.39:223,34,0	0/1:2,4:6:15.97:50,0,16	0/1:12,1:13:6.19:6,0,44	1/1:4,4:8:8.90:62,9,0	1/1:4,9:13:25.73:170,26,0	1/1:3,9:12:20.79:144,21,0	1/1:3,5:10:15.96:94,16,0	0/1:10,14:25:10.85:164,0,11	0/1:5,9:12:4.04:120,0,4	1/1:8,11:21:27.68:174,28,0	0/1:4,6:10:37.80:64,0,38	0/1:10,10:19:7.12:135,0,7	1/1:1,9:11:22:148,22,0	0/0:23,0:23:43.08:0,43,215	0/0:18,0:17:27.80:0,28,134	1/1:7,3:12:6.89:33,7,0	0/0:10,0:21:40.01:0,40,235	1/1:7,13:21:10.94:187,11,0	0/0:8,1:14:2.73:0,3,116
chr10	37444131	.	C	CCTATCTAT	5040.90	PASS	AB=0.858;AC=39;AF=0.750;AN=52;BaseQRankSum=3.640;DP=660;FS=5.507;HRun=0;HaplotypeScore=176.4632;InbreedingCoeff=0.4048;MQ=61.76;MQ0=6;MQRankSum=-2.284;QD=9.10;ReadPosRankSum=0.238;VQSLOD=3.6575;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:35:35.94:329,36,0	0/0:12,0:12:6.02:0,6,146	./.	./.	0/1:19,0:29:52.77:83,0,53	0/1:18,0:18:36.57:37,0,134	0/0:25,0:25:30.07:0,30,548	0/1:32,0:30:0:0,0,0	1/1:21,0:38:20.97:261,21,0	1/1:23,4:28:18.06:617,18,0	1/1:20,0:19:5.66:161,6,0	1/1:23,5:29:15.05:543,15,0	1/1:19,0:29:14.73:121,15,0	1/1:11,0:24:20.45:155,20,0	1/1:20,5:25:6.02:220,6,0	1/1:22,0:22:16.83:325,17,0	1/1:10,3:14:3.01:121,3,0	0/0:25,0:25:13.81:0,14,395	1/1:23,0:22:2.97:20,3,0	1/1:13,5:20:3.01:121,3,0	0/1:23,0:25:0:0,0,0	1/1:24,0:24:3:26,3,0	1/1:10,5:15:3.01:121,3,0	1/1:23,5:28:12.50:357,12,0	0/0:18,0:18:15.05:0,15,347	0/1:19,1:30:40.20:326,0,40	1/1:14,9:27:23.81:857,24,0	1/1:6,5:13:6.02:242,6,0
chr10	37444179	.	T	TCTATCTAT	3835.76	PASS	AB=1.000;AC=38;AF=0.760;AN=50;BaseQRankSum=2.197;DP=671;FS=5.616;HRun=0;HaplotypeScore=174.1654;InbreedingCoeff=0.3851;MQ=61.28;MQ0=21;MQRankSum=-1.134;QD=7.04;ReadPosRankSum=0.347;VQSLOD=2.3109;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:35,0:35:35.94:329,36,0	0/0:8,0:8:6.02:0,6,146	./.	./.	0/1:29,0:29:52.77:83,0,53	0/1:22,0:20:36.57:37,0,134	0/0:30,0:30:30.07:0,30,548	1/1:51,0:36:1.77:5,2,0	1/1:35,0:35:20.97:261,21,0	1/1:30,0:30:12.04:418,12,0	1/1:18,0:17:3.86:158,4,0	1/1:29,0:29:9.03:362,9,0	1/1:27,0:27:14.73:121,15,0	1/1:25,0:24:20.45:155,20,0	./.	1/1:23,0:23:10.81:147,11,0	1/1:15,0:15:4.85:127,5,0	0/0:21,0:21:19.73:0,20,402	1/1:20,0:16:2.97:20,3,0	1/1:15,0:15:3.01:121,3,0	0/1:25,0:24:0:0,0,0	1/1:19,7:27:2.90:26,3,0	1/1:20,0:19:3.01:121,3,0	1/1:19,0:19:9.50:332,10,0	0/0:11,0:11:15.05:0,15,347	0/1:32,0:31:40.20:326,0,40	1/1:33,0:33:11.77:448,12,0	1/1:15,0:15:6.02:242,6,0
chr10	37445674	.	AT	A	1604.40	PASS	AB=0.850;AC=17;AF=0.304;AN=56;BaseQRankSum=9.301;DP=581;FS=0.386;HRun=13;HaplotypeScore=64.6717;InbreedingCoeff=0.6825;MQ=70.67;MQ0=1;MQRankSum=0.135;QD=7.98;ReadPosRankSum=3.770;VQSLOD=2.5711;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,1:37:56.84:0,57,722	1/1:1,10:13:27.94:187,28,0	0/0:13,0:8:6:0,6,55	0/0:12,0:10:6:0,6,54	0/1:27,3:30:2.82:3,0,425	0/1:16,4:20:4.77:5,0,277	0/1:19,5:25:45.68:46,0,319	0/0:22,1:24:19.97:0,20,334	0/0:17,1:18:17.13:0,17,318	0/0:27,3:31:7.12:0,7,379	0/0:17,1:18:26.09:0,26,400	0/0:17,2:19:29.12:0,29,428	1/1:1,8:11:27.93:187,28,0	1/1:4,11:16:39.86:273,40,0	0/0:23,1:24:32.11:0,32,457	0/0:11,1:12:5.10:0,5,197	0/0:24,0:24:51.07:0,51,492	0/0:23,0:23:50.99:0,51,471	0/0:13,1:14:5.13:0,5,211	0/0:24,3:27:24.60:0,25,507	0/0:19,0:20:47.19:0,47,477	1/1:9,17:29:55.83:374,56,0	0/0:21,1:25:34.84:0,35,468	0/0:19,0:19:51.04:0,51,479	1/1:4,12:17:22.80:194,23,0	1/1:6,15:24:48.85:305,49,0	0/0:18,2:20:4.24:0,4,359	1/1:2,12:16:10.69:223,11,0
chr10	37446490	.	TTTTTTTTC	T	565.61	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=-4.555;DP=510;FS=1.216;HRun=0;HaplotypeScore=120.6991;InbreedingCoeff=0.3992;MQ=51.42;MQ0=11;MQRankSum=-2.394;QD=4.49;ReadPosRankSum=-3.730;VQSLOD=0.7195;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:31:1.62:0,2,346	0/0:6,0:6:6.66:0,7,181	0/1:20,0:7:5.99:6,0,38	0/0:12,0:6:7.10:0,7,25	1/1:17,0:17:10.01:229,10,0	0/0:18,0:18:11.83:0,12,284	0/0:16,0:16:2.31:0,2,517	0/0:28,0:28:24.20:0,24,1136	1/1:16,0:15:23.10:205,23,0	0/0:17,0:16:10.91:0,11,610	0/1:11,0:11:3.98:4,0,372	0/0:21,0:21:30.13:0,30,337	0/0:16,0:15:23.89:0,24,560	0/0:12,0:12:18.52:0,19,628	0/0:11,0:11:5.11:0,5,122	1/1:4,15:19:6.49:138,6,0	0/1:23,0:23:1.29:116,0,1	0/0:11,0:9:12.74:0,13,362	0/0:39,0:38:23.08:0,23,1610	0/0:16,0:16:9:0,9,230	0/1:10,0:9:6.18:6,0,512	0/1:10,0:10:5.32:5,0,104	0/0:15,0:15:27.69:0,28,309	0/0:28,0:27:50.78:0,51,451	0/0:22,0:19:19.79:0,20,816	0/0:28,0:28:67.63:0,68,1311	0/0:21,0:21:38.51:0,39,932	0/0:14,0:9:20.93:0,21,601
chr10	37447474	.	T	TTGTG	3355.99	PASS	AB=0.742;AC=46;AF=0.885;AN=52;BaseQRankSum=0.715;DP=623;FS=4.876;HRun=0;HaplotypeScore=136.0641;InbreedingCoeff=0.1244;MQ=60.37;MQ0=13;MQRankSum=-0.384;QD=6.20;ReadPosRankSum=-1.557;VQSLOD=1.9158;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:28:18.02:261,18,0	1/1:5,0:7:5.93:69,6,0	./.	./.	1/1:12,0:19:2.97:20,3,0	1/1:25,0:25:14.48:202,14,0	1/1:22,1:24:18.43:223,18,0	1/1:26,0:25:9.84:62,10,0	1/1:13,0:20:6:96,6,0	1/1:32,0:32:25.66:254,26,0	1/1:10,0:10:3.01:30,3,0	0/1:8,9:19:36.21:64,0,36	1/1:22,0:21:2.99:23,3,0	1/1:22,1:25:20.98:298,21,0	1/1:26,0:29:26.73:321,27,0	1/1:20,0:20:12.62:248,13,0	1/1:23,0:30:12.51:207,13,0	0/1:6,5:13:0:0,0,0	1/1:16,0:15:6.48:81,6,0	1/1:8,0:11:3.33:54,3,0	1/1:40,0:36:18.86:195,19,0	0/0:20,0:20:0.47:0,0,1	1/1:11,5:17:3.01:70,3,0	0/1:25,0:25:0.15:0,0,0	1/1:9,0:15:3.01:52,3,0	1/1:23,0:31:14.41:94,14,0	1/1:23,0:22:27.01:396,27,0	0/1:7,0:12:32.52:33,0,39
chr10	37448143	.	G	GC	6039.91	PASS	AB=0.585;AC=38;AF=0.679;AN=56;BaseQRankSum=-8.494;DP=543;FS=39.799;HRun=9;HaplotypeScore=62.9601;InbreedingCoeff=0.6541;MQ=86.46;MQ0=0;MQRankSum=-3.431;QD=15.10;ReadPosRankSum=-0.959;VQSLOD=2.2685;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,30:41:42.58:464,43,0	1/1:3,7:10:20.66:218,21,0	0/0:27,0:27:38.33:0,38,437	0/0:16,0:16:8.38:0,8,133	0/1:5,13:18:1.90:163,0,2	1/1:5,13:18:27.53:275,28,0	1/1:9,24:33:49.48:533,49,0	1/1:11,12:23:36.03:375,36,0	1/1:3,7:10:12.63:116,13,0	1/1:0,9:9:18.05:199,18,0	1/1:0,8:8:9.02:100,9,0	0/0:20,0:20:47.99:0,48,416	1/1:2,13:15:4.02:272,4,0	1/1:2,16:19:27.03:285,27,0	1/1:5,17:22:10.04:335,10,0	0/1:3,7:10:8.01:148,0,8	1/1:3,21:24:30.08:332,30,0	1/1:4,22:26:15.58:381,16,0	1/1:7,14:22:45.08:482,45,0	0/1:8,13:21:1.79:199,0,2	1/1:5,12:17:18.05:199,18,0	1/1:5,12:17:19.14:425,19,0	0/0:17,0:17:11.94:0,12,332	0/0:30,0:30:65.95:0,66,570	1/1:7,9:16:4.58:213,5,0	0/0:3,0:27:39.82:0,40,117	0/1:4,17:21:13.01:326,0,13	0/0:1,0:6:10.18:0,10,30
chr10	37450075	.	G	GATT	298.26	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=5.829;DP=731;FS=0.000;HRun=0;HaplotypeScore=137.9850;InbreedingCoeff=0.1142;MQ=53.59;MQ0=25;MQRankSum=1.995;QD=0.81;ReadPosRankSum=-0.690;VQSLOD=2.3788;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:31,0:28:23.64:24,0,24	1/1:7,0:7:2.84:9,3,0	0/0:30,0:14:4.28:0,4,450	0/0:38,0:16:29.29:0,29,535	0/1:27,0:27:35.42:35,0,39	0/1:21,0:21:27.41:30,0,27	0/0:16,0:14:4.74:0,5,11	0/0:38,0:36:6.79:0,7,16	0/1:26,0:24:0.57:1,0,17	0/0:29,0:29:17.15:0,17,163	0/0:17,0:17:6.36:0,6,44	0/0:25,0:24:49.48:0,49,908	1/1:21,0:21:0.59:26,1,0	0/1:17,0:18:15.45:15,0,33	1/1:22,8:28:7.22:74,7,0	0/1:24,0:23:14.97:17,0,15	1/1:31,0:26:6.53:79,7,0	1/1:22,0:22:7.08:48,7,0	0/1:24,0:26:19.82:35,0,20	0/1:32,0:32:14.24:23,0,14	1/1:15,0:14:0.89:20,1,0	0/0:17,0:20:5.90:0,6,21	0/0:27,0:27:74.44:0,74,1047	0/0:37,0:36:90.29:0,90,1331	0/0:28,0:28:4.42:0,4,22	0/0:30,0:28:78.62:0,79,1209	0/1:33,0:33:16.25:23,0,16	0/0:25,0:22:60.16:0,60,870
chr10	37450225	.	C	CCTT	12511.07	PASS	AC=50;AF=0.926;AN=54;BaseQRankSum=-2.790;DP=312;FS=1.791;HRun=0;HaplotypeScore=49.6576;InbreedingCoeff=0.6500;MQ=53.64;MQ0=27;MQRankSum=0.084;QD=49.06;ReadPosRankSum=2.485;VQSLOD=6.7457;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,11:11:27.09:622,27,0	1/1:0,6:6:18.06:414,18,0	0/0:26,0:6:8.83:0,9,85	0/0:24,0:6:0.65:0,1,4	1/1:0,13:13:30.10:646,30,0	1/1:0,7:7:15.05:345,15,0	1/1:0,8:8:18.06:413,18,0	./.	1/1:0,9:8:15.05:345,15,0	1/1:0,9:10:27.98:625,28,0	1/1:1,8:9:18.06:379,18,0	1/1:1,18:18:45.15:1034,45,0	1/1:0,11:12:33.11:750,33,0	1/1:1,12:13:23.96:450,24,0	1/1:1,12:11:17.99:544,18,0	1/1:0,12:11:30.10:691,30,0	1/1:0,15:15:33.11:749,33,0	1/1:1,4:5:9.03:207,9,0	1/1:6,4:6:12.04:276,12,0	1/1:0,11:12:33.11:752,33,0	1/1:1,5:6:6.02:138,6,0	1/1:0,9:9:24.08:553,24,0	1/1:2,7:10:21.07:471,21,0	1/1:3,10:12:30.10:641,30,0	1/1:1,5:6:14.97:345,15,0	1/1:0,10:10:27.09:575,27,0	1/1:0,10:9:21.07:470,21,0	1/1:3,4:7:5.45:75,5,0
chr10	37450396	.	C	CCTT	11874.71	PASS	AB=0.749;AC=52;AF=0.929;AN=56;BaseQRankSum=-3.033;DP=332;FS=8.278;HRun=0;HaplotypeScore=35.7706;InbreedingCoeff=0.3845;MQ=49.66;MQ0=21;MQRankSum=2.262;QD=37.58;ReadPosRankSum=1.658;VQSLOD=4.3004;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,15:16:33.11:760,33,0	1/1:0,6:6:15.05:279,15,0	0/0:16,0:1:2.80:0,3,13	0/1:34,0:3:0.80:1,0,45	1/1:0,11:12:30.10:632,30,0	1/1:0,12:13:24.08:528,24,0	1/1:2,14:16:33.11:742,33,0	1/1:7,5:10:12.03:242,12,0	1/1:1,5:6:12.04:277,12,0	1/1:1,14:14:36.12:780,36,0	1/1:2,8:11:17.99:345,18,0	1/1:0,7:7:15.05:335,15,0	1/1:0,8:8:18.06:415,18,0	1/1:0,8:8:18.06:402,18,0	1/1:1,6:6:3.01:54,3,0	1/1:0,10:8:12.04:265,12,0	1/1:5,4:8:21.05:412,21,0	0/1:2,9:11:23.91:195,0,24	1/1:5,2:4:6.01:92,6,0	1/1:0,14:14:33.11:746,33,0	1/1:2,9:11:18.89:480,19,0	1/1:0,6:7:15.01:283,15,0	1/1:0,8:9:18.06:415,18,0	1/1:6,10:15:39.12:832,39,0	1/1:1,11:13:27.09:609,27,0	1/1:1,13:13:33.10:650,33,0	1/1:0,11:12:30.10:691,30,0	1/1:0,7:7:18.06:414,18,0
chr10	37450495	.	CCTT	C	1388.09	PASS	AB=0.552;AC=5;AF=0.089;AN=56;BaseQRankSum=7.709;DP=567;FS=6.338;HRun=0;HaplotypeScore=78.9279;InbreedingCoeff=0.8072;MQ=58.00;MQ0=8;MQRankSum=1.875;QD=19.83;ReadPosRankSum=3.003;VQSLOD=2.9863;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,1:34:28.57:0,29,1266	0/0:7,0:7:21.06:0,21,395	0/0:31,0:15:31.90:0,32,521	0/0:29,0:12:23.93:0,24,292	0/0:11,0:11:30.10:0,30,589	0/0:13,0:13:33.07:0,33,587	0/0:16,0:16:36.10:0,36,632	0/0:14,0:14:24.07:0,24,428	0/0:19,0:19:39.04:0,39,672	0/0:21,0:21:54.18:0,54,1069	0/0:14,0:14:24.08:0,24,492	1/1:3,13:16:18.06:262,18,0	0/0:20,0:20:51.10:0,51,915	0/0:18,0:18:39.09:0,39,756	0/0:28,0:27:66.13:0,66,1219	0/0:24,0:24:60.21:0,60,1205	0/0:27,1:28:39.96:0,40,1187	0/0:17,0:17:42.07:0,42,755	0/0:17,0:15:30.06:0,30,471	0/0:22,0:22:54.18:0,54,1074	0/0:29,0:29:75.20:0,75,1425	0/0:15,0:15:30.10:0,30,610	1/1:5,17:22:38.39:567,38,0	0/1:6,26:32:7.50:688,0,8	0/0:19,0:20:57.19:0,57,1090	0/0:22,0:20:54.18:0,54,1034	0/0:21,0:20:48.15:0,48,915	0/0:7,0:7:18.04:0,18,296
chr10	37453456	.	CTTG	C	2012.54	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.373;DP=668;FS=4.483;HRun=0;HaplotypeScore=93.2160;InbreedingCoeff=0.9861;MQ=76.11;MQ0=1;MQRankSum=0.506;QD=30.04;ReadPosRankSum=3.136;VQSLOD=4.0045;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,132,1959	0/0:11,0:11:33.08:0,33,575	0/0:32,0:31:52.38:0,52,1051	0/0:30,0:24:53.29:0,53,995	0/0:15,0:15:42.08:0,42,732	0/0:19,0:19:42:0,42,620	0/0:35,0:35:93.25:0,93,1702	0/0:26,0:26:63.15:0,63,946	0/0:24,1:25:29.19:0,29,1258	0/0:25,0:25:65.98:0,66,1102	0/0:20,0:20:54.03:0,54,821	1/1:2,27:29:78.26:1187,78,0	0/0:26,0:26:75.19:0,75,1376	0/0:25,0:25:69.18:0,69,1202	0/0:24,0:24:66.19:0,66,1231	0/0:29,0:29:81.26:0,81,1628	0/0:19,0:19:54.14:0,54,985	0/0:18,0:18:48.11:0,48,962	0/0:23,0:23:60.14:0,60,972	0/0:21,0:21:60.11:0,60,993	0/0:29,0:29:75.19:0,75,1344	0/0:17,0:17:47.96:0,48,540	1/1:0,15:15:11.20:183,11,0	1/1:1,22:23:51.17:782,51,0	0/0:14,0:14:39.07:0,39,623	0/0:35,0:35:90.17:0,90,1420	0/0:28,0:28:66.14:0,66,1112	0/0:10,0:10:30.10:0,30,640
chr10	37453678	.	T	TCTGA	7121.49	PASS	AB=1.000;AC=30;AF=0.536;AN=56;BaseQRankSum=-13.945;DP=783;FS=18.761;HRun=0;HaplotypeScore=195.2832;InbreedingCoeff=-0.3385;MQ=61.54;MQ0=4;MQRankSum=1.989;QD=10.19;ReadPosRankSum=-11.501;VQSLOD=0.6362;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:29:99:105,0,319	0/0:14,0:14:5.93:0,6,189	0/0:27,0:21:35.16:0,35,406	0/0:31,0:23:28.42:0,28,467	0/1:22,0:22:78.55:79,0,199	0/1:21,0:21:21.07:21,0,280	0/1:36,0:36:99:190,0,330	1/1:34,0:33:6.36:493,6,0	0/1:30,0:30:99:206,0,194	0/1:30,0:30:99:131,0,289	0/1:17,0:17:54.10:54,0,212	1/1:3,35:40:66.15:1653,66,0	0/1:31,0:31:99:150,0,391	0/1:33,0:33:99:205,0,344	0/1:46,0:46:99:197,0,527	0/1:36,0:36:99:150,0,306	0/1:28,0:28:81.06:81,0,323	0/1:12,0:12:70:70,0,114	0/0:12,0:11:11.79:0,12,81	0/1:30,0:30:80.11:80,0,360	0/1:39,0:38:99:213,0,440	0/1:24,0:24:99:104,0,207	1/1:5,18:23:20.69:526,21,0	1/1:6,31:37:60.21:1503,60,0	0/1:31,0:31:84.73:85,0,301	1/1:4,0:32:52.84:596,53,0	0/1:35,0:35:99:111,0,415	1/1:1,0:3:6.02:120,6,0
chr10	37454702	.	C	CACACACACACAT	4329.24	PASS	AB=1.000;AC=31;AF=0.554;AN=56;BaseQRankSum=-1.300;DP=594;FS=10.704;HRun=0;HaplotypeScore=181.1511;InbreedingCoeff=0.2517;MQ=45.47;MQ0=32;MQRankSum=0.531;QD=11.76;ReadPosRankSum=-0.304;VQSLOD=3.1737;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:25:23.90:527,24,0	1/1:11,0:11:8.44:179,8,0	0/0:43,0:9:4.86:0,5,47	0/0:55,0:17:3.33:0,3,113	0/1:21,0:20:23.50:24,0,79	1/1:28,0:27:9.18:170,9,0	1/1:18,0:14:9:99,9,0	1/1:29,0:26:29.11:457,29,0	0/0:16,0:15:23.11:0,23,223	1/1:24,0:20:53.90:921,54,0	0/0:17,0:16:2.98:0,3,21	0/1:11,0:11:22.10:54,0,22	1/1:20,0:19:4.26:111,4,0	1/1:8,0:6:2.02:24,2,0	0/0:5,19:26:0.77:0,1,1	0/0:19,0:16:5.36:0,5,127	0/0:17,0:16:30.50:0,30,223	0/1:12,0:12:5.05:89,0,5	1/1:21,0:17:44.89:790,45,0	1/1:20,0:19:0.47:1,0,0	1/1:27,0:27:24.06:202,24,0	1/1:29,0:26:33.63:371,34,0	0/1:20,0:18:36.80:37,0,62	0/1:15,0:14:16.73:37,0,17	0/0:16,0:16:0.14:0,0,0	0/1:17,0:14:45.36:210,0,45	0/0:17,0:16:2.62:0,3,7	0/1:9,0:7:25.82:26,0,33
chr10	37454704	.	C	CACACACACAT	4302.44	PASS	AB=1.000;AC=32;AF=0.571;AN=56;BaseQRankSum=-2.351;DP=592;FS=11.985;HRun=0;HaplotypeScore=166.7614;InbreedingCoeff=0.2729;MQ=43.23;MQ0=36;MQRankSum=1.811;QD=10.98;ReadPosRankSum=1.306;VQSLOD=2.8868;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:23:23.90:508,24,0	1/1:11,0:11:8.42:157,8,0	0/0:45,0:9:11.68:0,12,77	0/0:53,0:15:3.80:0,4,113	0/1:19,0:18:34.99:35,0,79	1/1:29,0:28:4.62:162,5,0	1/1:18,0:14:9:99,9,0	1/1:29,0:26:30.11:410,30,0	0/0:15,0:14:23.90:0,24,197	1/1:24,0:20:51.39:814,51,0	0/0:17,0:16:2.98:0,3,21	0/1:12,0:11:28.89:36,0,29	1/1:21,0:20:4.34:128,4,0	1/1:10,0:8:3.33:26,3,0	0/1:28,0:28:0.33:0,0,1	0/0:17,0:14:5.36:0,5,114	0/0:19,0:17:24.18:0,24,155	0/1:11,0:11:2.13:90,0,2	1/1:9,13:21:50.44:889,50,0	1/1:19,0:18:0.47:1,0,0	1/1:26,0:26:23.16:200,23,0	1/1:29,0:26:33.99:354,34,0	0/1:18,0:16:36.88:37,0,62	0/1:13,0:12:16.73:37,0,17	0/0:3,11:15:2.02:0,2,6	0/1:15,0:12:43.20:241,0,43	0/0:18,0:16:3.17:0,3,10	0/1:9,0:7:22.66:77,0,23
chr10	37454708	.	C	CACACAT	2765.82	PASS	AB=0.972;AC=29;AF=0.518;AN=56;BaseQRankSum=-0.395;DP=575;FS=12.741;HRun=0;HaplotypeScore=139.9666;InbreedingCoeff=-0.0700;MQ=41.65;MQ0=35;MQRankSum=2.745;QD=6.68;ReadPosRankSum=4.104;VQSLOD=1.3894;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:24:23.83:354,24,0	1/1:11,0:11:8.08:121,8,0	0/0:45,0:8:14.70:0,15,126	0/0:53,0:13:13.43:0,13,125	0/1:21,0:20:49.96:50,0,79	1/1:27,1:27:5.20:128,5,0	1/1:18,0:14:9:99,9,0	0/1:29,0:26:99:186,0,116	0/1:15,0:14:4.73:5,0,70	0/1:25,0:21:14.92:437,0,15	0/0:2,12:14:2.98:0,3,21	0/1:13,0:12:18.16:18,0,31	0/1:21,0:20:10.20:67,0,10	1/1:10,0:8:3.06:25,3,0	0/1:28,0:28:0.02:0,0,0	0/0:14,0:11:5.46:0,5,89	0/1:17,0:15:75.58:76,0,81	0/1:10,0:10:2.76:73,0,3	0/1:19,0:15:40.69:391,0,41	0/1:5,10:15:0:0,0,0	1/1:25,0:25:23.52:201,24,0	1/1:27,1:25:32.14:315,32,0	0/1:16,0:14:37.33:37,0,62	0/1:12,0:11:17.09:36,0,17	0/0:16,0:15:2.38:0,2,12	0/1:15,0:12:43.80:225,0,44	0/0:8,7:16:5.63:0,6,26	0/1:9,0:7:15.73:81,0,16
chr10	37454710	.	C	CACAT	2283.60	PASS	AB=0.975;AC=29;AF=0.518;AN=56;BaseQRankSum=0.699;DP=568;FS=10.819;HRun=0;HaplotypeScore=128.1737;InbreedingCoeff=-0.0842;MQ=39.54;MQ0=35;MQRankSum=2.932;QD=5.57;ReadPosRankSum=3.339;VQSLOD=1.9278;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:23:23.37:279,23,0	1/1:11,0:11:11.98:126,12,0	0/0:45,0:8:14.70:0,15,109	0/0:51,0:9:11.27:0,11,122	0/1:20,0:19:25.05:25,0,79	1/1:28,0:27:7.94:135,8,0	1/1:19,0:15:8.98:99,9,0	0/1:29,0:26:99:181,0,153	0/1:15,0:14:40.95:53,0,41	0/1:25,0:21:38.99:298,0,39	0/0:15,0:14:2.98:0,3,21	0/1:13,0:12:5.48:5,0,30	0/1:8,13:20:8.20:48,0,8	1/1:9,1:8:3.44:26,3,0	0/1:25,0:25:0.11:0,0,0	0/0:15,0:12:5.32:0,5,76	0/1:18,0:16:78.36:184,0,78	0/1:10,0:10:14.84:67,0,15	0/1:19,0:15:64.05:240,0,64	0/1:16,0:14:0.07:0,0,0	1/1:24,0:24:23.64:202,24,0	1/1:29,0:26:31.97:295,32,0	0/1:16,0:14:14.39:14,0,62	0/1:12,0:11:17.22:37,0,17	0/0:15,0:14:1.84:0,2,6	0/1:15,0:12:59.23:98,0,59	0/0:16,1:15:4.99:0,5,26	0/1:9,0:7:28.86:33,0,29
chr10	37454745	.	AGG	A	338.82	PASS	AB=0.985;AC=17;AF=0.315;AN=54;BaseQRankSum=1.926;DP=517;FS=1.898;HRun=3;HaplotypeScore=93.8463;InbreedingCoeff=0.0251;MQ=24.03;MQ0=100;MQRankSum=-0.542;QD=1.37;ReadPosRankSum=4.503;VQSLOD=-0.4199;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:28,1:19:7.73:40,0,8	0/1:12,0:9:9.28:10,0,9	0/0:26,0:5:8.87:0,9,62	0/0:22,0:3:5.98:0,6,48	1/1:18,0:13:2.92:17,3,0	1/1:27,0:19:0.50:20,0,0	0/0:21,0:8:3.22:0,3,14	0/0:31,0:18:6.67:0,7,34	0/1:13,0:11:8.73:78,0,9	0/1:23,0:15:31.78:59,0,32	./.	0/0:13,0:8:4.15:0,4,19	0/0:12,0:9:5.43:0,5,29	0/1:16,0:12:7.87:8,0,15	0/0:20,1:17:5.62:0,6,31	0/0:13,0:8:0.74:0,1,2	0/1:21,0:14:10.26:80,0,10	0/0:10,0:5:5.13:0,5,21	0/1:16,1:9:18.97:43,0,19	0/1:13,0:9:0:0,0,0	0/0:25,0:14:0:0,0,0	1/1:23,0:14:2.60:18,3,0	0/0:12,0:9:0.89:0,1,3	0/0:19,0:10:0:0,0,1	0/0:17,0:13:0.89:0,1,2	1/1:16,0:7:1.83:69,2,0	0/1:18,1:12:12.83:25,0,13	0/0:18,0:7:8.40:0,8,55
chr10	37454951	.	C	CTGTG	13516.49	PASS	AB=0.553;AC=50;AF=0.893;AN=56;BaseQRankSum=-5.220;DP=682;FS=2.008;HRun=0;HaplotypeScore=137.0546;InbreedingCoeff=0.5534;MQ=64.50;MQ0=7;MQRankSum=-4.928;QD=22.34;ReadPosRankSum=0.521;VQSLOD=4.6848;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,28:44:69.24:1674,69,0	1/1:7,5:12:15.02:313,15,0	0/0:44,0:31:25.59:0,26,423	0/0:33,0:29:21.94:0,22,329	1/1:15,0:19:11.97:209,12,0	1/1:6,9:19:20.81:449,21,0	1/1:18,16:38:44.50:863,45,0	1/1:29,8:38:38.74:599,39,0	1/1:4,9:15:12.04:248,12,0	1/1:20,1:28:33.11:647,33,0	1/1:9,1:17:11.63:169,12,0	0/1:0,1:14:2.18:64,0,2	0/1:7,10:20:24.98:421,0,25	1/1:6,10:18:24.08:573,24,0	1/1:9,15:23:30.10:728,30,0	1/1:13,1:26:39.13:736,39,0	1/1:11,3:19:21.07:404,21,0	1/1:7,13:24:43.84:847,44,0	1/1:11,5:18:23.76:404,24,0	1/1:10,12:24:27.09:655,27,0	1/1:17,25:48:53.86:1130,54,0	1/1:8,13:22:17.77:436,18,0	1/1:1,0:16:3.77:75,4,0	1/1:4,0:28:0.84:4,1,0	1/1:9,10:20:17.80:377,18,0	1/1:9,9:23:38.86:682,39,0	1/1:7,12:18:29.70:727,30,0	1/1:4,4:8:5.75:85,6,0
chr10	37455429	.	CCTT	C	2368.27	PASS	AB=0.900;AC=20;AF=0.357;AN=56;BaseQRankSum=13.561;DP=696;FS=4.808;HRun=0;HaplotypeScore=182.0333;InbreedingCoeff=-0.5563;MQ=51.66;MQ0=1;MQRankSum=-9.327;QD=4.44;ReadPosRankSum=-5.309;VQSLOD=0.7766;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:36,0:37:33.71:34,0,1637	0/0:13,0:13:21.24:0,21,518	0/0:24,0:18:24.37:0,24,799	0/0:19,0:7:15.71:0,16,239	0/1:26,0:26:70.04:70,0,790	0/1:34,0:34:99:131,0,1423	0/1:26,1:25:91.63:92,0,1239	0/1:27,1:28:61.79:62,0,1511	0/0:17,0:17:46.39:0,46,994	0/1:20,3:23:99:185,0,1116	0/1:23,11:34:99:367,0,1498	0/1:20,5:25:99:149,0,1224	0/1:27,0:27:7.63:8,0,844	0/1:16,5:20:99:216,0,998	0/1:19,6:25:99:207,0,1112	0/0:28,0:28:16.90:0,17,1404	0/1:26,0:26:66.57:67,0,955	0/1:16,4:20:51.81:52,0,981	0/1:16,2:18:47.25:47,0,1097	0/1:36,8:44:99:355,0,2224	0/1:15,1:16:5.13:5,0,769	0/1:15,6:21:99:152,0,957	0/1:17,5:22:99:99,0,1043	0/1:19,2:21:99:171,0,664	0/1:36,2:38:56.85:57,0,826	0/0:24,0:24:65.58:0,66,1438	0/0:24,0:24:36.06:0,36,809	0/0:12,1:13:2.86:0,3,521
chr10	37455432	.	T	TC	2823.21	PASS	AB=0.896;AC=20;AF=0.357;AN=56;BaseQRankSum=15.000;DP=693;FS=0.764;HRun=0;HaplotypeScore=163.3454;InbreedingCoeff=-0.5665;MQ=50.68;MQ0=1;MQRankSum=-10.334;QD=5.26;ReadPosRankSum=-4.827;VQSLOD=2.5139;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:30,8:38:99:206,0,905	0/0:13,0:13:25.50:0,26,313	0/0:22,0:15:36.95:0,37,458	0/0:18,0:7:15.81:0,16,143	0/1:14,13:27:99:430,0,398	0/1:22,11:33:99:390,0,762	0/1:23,5:26:99:105,0,653	0/1:28,2:30:99:134,0,886	0/1:13,3:16:91.60:92,0,496	0/1:21,3:24:99:108,0,605	0/1:34,0:35:99:134,0,864	0/1:25,0:25:65.42:65,0,630	0/0:27,0:27:19.09:0,19,483	0/1:20,0:19:99:106,0,529	0/1:22,0:24:99:108,0,587	0/1:20,8:28:99:244,0,739	0/1:15,11:27:99:246,0,544	0/0:19,0:19:10.73:0,11,542	0/1:19,0:19:52.96:53,0,594	0/1:42,2:44:99:275,0,1190	0/1:16,0:16:48.69:49,0,428	0/1:20,0:20:97.75:98,0,503	0/1:24,0:24:37.21:37,0,537	0/1:16,4:20:68.21:68,0,405	0/1:39,0:39:37.05:37,0,450	0/0:25,0:25:11.38:0,11,758	0/0:24,0:24:36.02:0,36,462	0/0:8,0:8:11.62:0,12,231
chr10	37455441	.	C	CTTCTTTCTTTCTTTCT	24585.67	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-0.678;DP=697;FS=14.688;HRun=0;HaplotypeScore=281.3145;InbreedingCoeff=0.6626;MQ=49.14;MQ0=0;MQRankSum=0.772;QD=36.97;ReadPosRankSum=2.007;VQSLOD=2.7168;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:33,0:33:63:1593,63,0	1/1:7,7:17:8.95:470,9,0	0/0:16,0:10:5.99:0,6,72	0/0:16,0:7:3.01:0,3,32	1/1:26,0:26:60:1250,60,0	1/1:29,0:29:62.71:1327,63,0	1/1:27,0:25:48.12:927,48,0	1/1:34,0:34:57.04:915,57,0	1/1:18,0:18:45.12:601,45,0	1/1:27,0:27:45.03:892,45,0	1/1:35,0:35:69.19:1604,69,0	1/1:25,0:27:51.14:1035,51,0	1/1:13,16:32:9.03:677,9,0	1/1:21,0:20:23.64:769,24,0	1/1:24,0:24:51.11:933,51,0	1/1:26,0:26:63.18:1448,63,0	1/1:28,0:28:53.99:1200,54,0	1/1:18,0:18:24.03:508,24,0	1/1:19,0:19:42.04:650,42,0	1/1:37,0:37:76.95:2073,77,0	1/1:15,0:15:24.06:875,24,0	1/1:18,0:18:33.09:930,33,0	1/1:25,0:26:56.98:982,57,0	1/1:19,0:20:42:1053,42,0	1/1:12,27:44:9.03:384,9,0	1/1:7,0:30:63.22:1036,63,0	1/1:10,14:28:3.01:226,3,0	1/1:6,0:6:9.03:226,9,0
chr10	37456021	.	GTGT	G	829.99	PASS	AC=10;AF=0.714;AN=14;BaseQRankSum=1.087;DP=595;FS=0.000;HRun=0;HaplotypeScore=98.7423;MQ=61.82;MQ0=3;MQRankSum=0.343;QD=5.76;ReadPosRankSum=-0.744;VQSLOD=1.9433;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:33,0:28:0.47:0,0,1	./.	./.	./.	./.	./.	./.	./.	./.	1/1:42,0:42:0.27:187,0,0	./.	./.	./.	./.	./.	./.	./.	./.	0/0:31,0:31:3.48:0,3,53	./.	1/1:25,0:25:5.77:52,6,0	1/1:45,0:45:38.93:318,39,0	./.	1/1:13,10:23:10.83:310,11,0	./.	1/1:5,4:9:3.01:40,3,0
chr10	37456064	.	TGTC	T	1352.78	PASS	AB=0.884;AC=18;AF=0.692;AN=26;BaseQRankSum=3.899;DP=185;FS=0.000;HRun=0;HaplotypeScore=57.9409;InbreedingCoeff=0.0753;MQ=56.29;MQ0=26;MQRankSum=2.048;QD=8.51;ReadPosRankSum=3.021;VQSLOD=2.3742;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/1:5,0:3:0.89:2,0,1	./.	./.	./.	./.	./.	./.	1/1:1,0:1:1.82:5,2,0	./.	1/1:1,29:30:32.98:474,33,0	./.	1/1:2,0:1:2.94:18,3,0	./.	./.	0/0:1,0:1:0.47:0,0,1	./.	./.	1/1:4,0:1:2.92:17,3,0	0/0:5,0:1:3.01:0,3,35	./.	0/1:4,26:26:9.18:135,0,9	1/1:1,53:54:35.72:656,36,0	1/1:1,0:1:2.80:13,3,0	0/1:19,0:17:77.84:115,0,78	1/1:1,0:1:0.89:2,1,0	0/1:12,0:12:8.29:8,0,101
chr10	37457375	.	TCACACACA	T	4027.94	PASS	AB=0.855;AC=34;AF=0.654;AN=52;BaseQRankSum=4.227;DP=585;FS=17.122;HRun=0;HaplotypeScore=174.9890;InbreedingCoeff=0.3623;MQ=66.95;MQ0=18;MQRankSum=-5.398;QD=10.57;ReadPosRankSum=-0.238;VQSLOD=1.6425;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:29:8.77:143,9,0	./.	./.	0/0:46,0:25:0:0,0,0	1/1:9,0:10:3.01:45,3,0	0/1:15,0:15:30.41:71,0,30	0/1:26,4:30:76.16:140,0,76	0/0:23,0:23:0:0,0,0	1/1:20,4:24:6.02:149,6,0	1/1:15,5:21:9.15:275,9,0	1/1:6,3:10:2.48:74,2,0	1/1:21,0:29:15.05:275,15,0	1/1:7,5:12:11.98:297,12,0	1/1:12,4:17:18.05:418,18,0	1/1:14,6:21:18.78:429,19,0	1/1:14,7:21:24.55:578,25,0	1/1:27,6:32:14.62:372,15,0	0/1:14,4:21:72.91:218,0,73	0/0:8,0:7:0.47:0,0,1	0/0:10,3:12:0:0,0,0	0/0:47,0:47:5.98:0,6,46	1/1:14,5:21:7.35:121,7,0	1/1:9,0:13:2.83:55,3,0	0/1:15,0:16:0:0,0,0	1/1:11,1:12:8.51:146,9,0	0/0:25,0:24:39.12:0,39,870	1/1:14,4:18:9.03:223,9,0	0/0:5,0:4:9.03:0,9,276
chr10	37458765	.	GACACACACAC	G	2494.73	PASS	AB=0.794;AC=30;AF=0.625;AN=48;BaseQRankSum=4.468;DP=544;FS=1.874;HRun=0;HaplotypeScore=163.8982;InbreedingCoeff=0.6234;MQ=62.34;MQ0=10;MQRankSum=-3.286;QD=8.34;ReadPosRankSum=-0.889;VQSLOD=2.5514;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:22,5:27:3.01:38,3,0	1/1:12,0:12:5.98:58,6,0	./.	./.	0/0:17,0:18:18.06:0,18,843	1/1:8,4:12:6.02:123,6,0	1/1:26,4:31:8.83:232,9,0	0/0:10,0:10:1.55:0,2,4	0/0:20,0:21:12.04:0,12,398	0/1:15,8:23:7.72:249,0,8	1/1:6,1:7:3.01:88,3,0	0/0:19,0:21:11.98:0,12,138	1/1:13,1:15:9.03:214,9,0	1/1:13,4:16:9.03:246,9,0	1/1:11,5:18:18.06:453,18,0	0/0:23,0:27:39.12:0,39,1368	0/0:17,0:26:21.07:0,21,892	1/1:22,0:23:8.75:146,9,0	1/1:16,1:16:2.85:88,3,0	0/1:9,0:11:0:0,0,0	1/1:27,0:27:6.02:138,6,0	1/1:10,7:17:6.02:177,6,0	0/0:15,0:22:17.65:0,18,226	0/0:21,0:22:8.79:0,9,229	./.	1/1:14,0:18:9.03:180,9,0	1/1:22,1:23:7:232,7,0	./.
chr10	37460440	.	A	AGAGGC	56173.57	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-9.909;DP=857;FS=0.000;HRun=0;HaplotypeScore=144.2954;InbreedingCoeff=0.9833;MQ=76.81;MQ0=3;MQRankSum=-12.079;QD=70.57;ReadPosRankSum=6.045;VQSLOD=6.0517;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,50:60:99:4261,138,0	1/1:1,11:12:29.94:918,30,0	0/0:31,0:30:87.28:0,87,1755	0/0:30,0:30:72.20:0,72,1416	1/1:6,13:21:32.75:1030,33,0	1/1:5,26:33:78.27:2378,78,0	1/1:6,18:28:63.22:1938,63,0	1/1:15,19:35:84.29:2449,84,0	1/1:7,22:31:75.21:2215,75,0	1/1:11,25:37:99:2979,105,0	1/1:5,16:21:42.14:1310,42,0	1/1:6,27:35:90.27:2730,90,0	1/1:8,20:29:63.22:1885,63,0	1/1:4,21:25:60.21:1839,60,0	1/1:4,25:33:78.27:2327,78,0	1/1:2,27:31:81.14:2479,81,0	1/1:3,51:56:99:4244,138,0	1/1:5,25:32:66.23:2010,66,0	1/1:10,21:31:81.28:2409,81,0	1/1:6,14:20:45.07:1256,45,0	1/1:13,57:71:99:4973,159,0	1/1:6,18:25:53.89:1647,54,0	1/1:5,13:19:36.12:1119,36,0	1/1:5,14:21:27.09:846,27,0	1/1:4,16:21:48.12:1427,48,0	1/1:5,39:46:99:3932,132,0	1/1:2,12:16:39.13:1200,39,0	1/1:0,4:4:12.04:376,12,0
chr10	37461280	.	A	AGT	1717.64	PASS	AB=0.911;AC=29;AF=0.580;AN=50;BaseQRankSum=1.112;DP=540;FS=4.160;HRun=0;HaplotypeScore=86.3006;InbreedingCoeff=-0.2136;MQ=62.14;MQ0=16;MQRankSum=0.011;QD=3.99;ReadPosRankSum=-0.356;VQSLOD=1.9400;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:25,1:40:0:0,0,0	0/1:6,0:6:17.42:19,0,17	./.	./.	1/1:16,0:16:2.99:23,3,0	0/0:12,6:18:2.66:0,3,24	0/1:29,1:30:99:134,0,134	0/1:27,0:24:28.04:28,0,38	1/1:15,6:22:8.06:95,8,0	1/1:13,6:17:21.02:267,21,0	./.	0/0:12,0:10:0:0,0,0	1/1:7,2:11:6.02:89,6,0	0/1:12,0:11:23.63:57,0,24	0/1:9,0:8:20.59:98,0,21	0/1:8,3:11:26.62:39,0,27	0/1:25,9:36:99:193,0,115	0/1:22,4:26:88.68:155,0,89	1/1:21,1:22:3.95:40,4,0	0/1:12,3:15:73.51:74,0,81	0/1:36,0:32:49.88:165,0,50	1/1:6,3:10:6.01:71,6,0	1/1:15,0:15:6.01:64,6,0	1/1:24,0:28:2.99:25,3,0	0/1:16,1:18:8.60:191,0,9	0/0:19,0:18:18.41:0,18,160	0/1:19,0:18:33.22:33,0,56	0/0:5,0:4:5.98:0,6,52
chr10	37461479	.	G	GT	4579.23	PASS	AB=0.800;AC=41;AF=0.732;AN=56;BaseQRankSum=-6.064;DP=452;FS=6.490;HRun=12;HaplotypeScore=56.7538;InbreedingCoeff=0.4023;MQ=62.40;MQ0=8;MQRankSum=1.171;QD=11.39;ReadPosRankSum=0.737;VQSLOD=4.1451;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:12,8:20:6.51:252,0,7	1/1:3,2:6:5.61:43,6,0	0/1:39,1:13:41.06:41,0,50	0/1:48,1:8:3.61:4,0,19	1/1:6,10:18:25.99:254,26,0	1/1:9,6:15:23.16:206,23,0	1/1:6,8:15:10.97:251,11,0	1/1:9,17:26:14.06:396,14,0	1/1:3,8:13:23.86:213,24,0	1/1:6,3:9:21.03:202,21,0	1/1:3,12:15:15.05:298,15,0	0/0:7,0:12:12.79:0,13,37	1/1:6,6:12:21.03:203,21,0	0/1:4,4:8:3.69:127,0,4	1/1:2,4:6:15.47:139,15,0	1/1:2,7:9:26.82:237,27,0	1/1:8,9:17:30.35:274,30,0	1/1:7,8:15:13.66:288,14,0	1/1:12,12:23:21.18:284,21,0	1/1:12,7:19:19.57:313,20,0	1/1:2,6:8:5.96:58,6,0	1/1:2,6:9:2.92:168,3,0	0/0:4,0:12:20.36:0,20,58	0/0:2,0:12:12.22:0,12,36	0/1:13,13:25:26.87:199,0,27	0/0:14,0:13:22.53:0,23,168	0/1:5,10:16:3.87:128,0,4	0/1:3,0:3:3.83:4,0,16
chr10	37461532	.	CT	C	1440.50	PASS	AB=0.792;AC=38;AF=0.679;AN=56;BaseQRankSum=0.025;DP=457;FS=3.062;HRun=16;HaplotypeScore=63.1287;InbreedingCoeff=0.1698;MQ=44.27;MQ0=32;MQRankSum=1.124;QD=4.14;ReadPosRankSum=3.016;VQSLOD=0.8215;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,9:22:23.83:126,24,0	1/1:1,7:9:19.65:114,20,0	0/0:35,1:6:3:0,3,25	0/0:48,1:10:0:0,0,0	1/1:9,3:13:9.75:47,10,0	1/1:4,9:14:16.67:94,17,0	1/1:9,6:18:25.84:132,26,0	0/1:16,3:18:13.64:42,0,14	0/1:9,0:7:13.45:27,0,13	1/1:9,5:16:20.64:107,21,0	1/1:15,3:17:10.39:59,10,0	1/1:10,0:13:8.05:23,8,0	1/1:5,3:6:11.55:66,12,0	1/1:5,0:5:2.84:18,3,0	0/1:6,6:11:29.33:69,0,29	0/1:5,6:12:7.61:72,0,8	1/1:10,10:18:23.12:143,23,0	0/1:19,5:27:0.39:107,0,0	0/1:12,5:16:18.21:84,0,18	0/1:17,7:24:7.29:42,0,7	0/0:2,1:3:3:0,3,25	1/1:6,1:7:2.89:18,3,0	1/1:11,0:18:6.87:20,7,0	1/1:7,0:8:6:17,6,0	1/1:14,6:20:22.38:130,22,0	0/0:13,0:13:22.58:0,23,136	0/1:8,1:9:11.03:42,0,11	0/0:4,0:3:5.68:0,6,28
chr10	37461733	.	AACAC	A	1960.60	PASS	AB=0.852;AC=25;AF=0.500;AN=50;BaseQRankSum=1.532;DP=479;FS=20.675;HRun=0;HaplotypeScore=89.6501;InbreedingCoeff=0.5236;MQ=70.80;MQ0=10;MQRankSum=1.482;QD=7.21;ReadPosRankSum=-1.273;VQSLOD=0.4291;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:21,5:25:34.60:151,0,35	0/0:5,0:5:9.03:0,9,191	./.	./.	0/1:15,4:20:0.60:93,0,1	1/1:5,5:11:15.03:192,15,0	1/1:11,8:20:9.49:141,9,0	0/0:20,0:20:3.45:0,3,22	1/1:6,9:17:20.39:269,20,0	1/1:14,9:23:26.30:350,26,0	1/1:4,9:12:6.01:74,6,0	0/0:13,0:13:15.17:0,15,256	0/0:10,0:10:14.50:0,15,197	0/0:9,0:9:15.02:0,15,234	1/1:11,6:18:18.06:281,18,0	1/1:14,0:16:15.33:126,15,0	1/1:19,9:28:6.64:267,7,0	1/1:9,5:14:6.02:94,6,0	0/0:13,0:13:10.24:0,10,161	0/1:12,1:13:25.78:26,0,266	0/1:16,1:17:7.85:8,0,422	0/0:12,0:12:18.03:0,18,325	0/0:15,0:16:15.05:0,15,269	0/0:23,0:27:36.05:0,36,528	0/0:19,0:21:29.54:0,30,460	1/1:11,0:21:6.94:54,7,0	0/1:10,1:14:17.31:17,0,373	./.
chr10	37462810	.	AGT	A	949.33	PASS	AB=0.856;AC=33;AF=0.688;AN=48;BaseQRankSum=2.393;DP=580;FS=2.015;HRun=0;HaplotypeScore=77.0980;InbreedingCoeff=0.1972;MQ=67.54;MQ0=8;MQRankSum=0.179;QD=2.32;ReadPosRankSum=0.917;VQSLOD=1.5548;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:33:32.09:55,0,32	./.	./.	./.	0/0:23,0:23:15.04:0,15,187	1/1:8,0:8:2.98:22,3,0	1/1:19,3:24:11.69:92,12,0	0/0:25,0:25:2.92:0,3,17	0/1:15,3:18:11.67:55,0,12	1/1:17,0:18:2.84:14,3,0	0/1:6,2:8:22.94:23,0,46	1/1:15,0:21:8.52:42,9,0	1/1:11,2:13:5.67:70,6,0	1/1:16,3:19:5.85:46,6,0	1/1:19,0:19:11.82:108,12,0	0/0:14,0:14:11.99:0,12,113	0/0:23,0:36:27.01:0,27,281	1/1:17,7:25:20.85:205,21,0	1/1:19,1:22:8.69:60,9,0	0/1:8,2:9:13.96:26,0,14	0/1:51,9:60:22.43:22,0,46	1/1:16,1:18:11.86:109,12,0	0/1:16,0:20:0:1,0,0	1/1:13,0:20:11.36:56,11,0	0/1:9,1:12:16.10:32,0,16	1/1:20,0:21:2.84:14,3,0	1/1:16,1:18:7.17:49,7,0	./.
chr10	37463424	.	CT	C	3624.59	PASS	AB=0.774;AC=42;AF=0.750;AN=56;BaseQRankSum=5.349;DP=569;FS=1.085;HRun=15;HaplotypeScore=62.2611;InbreedingCoeff=0.5664;MQ=72.85;MQ0=3;MQRankSum=0.916;QD=7.61;ReadPosRankSum=3.568;VQSLOD=2.8529;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,35:44:83.79:531,84,0	0/1:3,3:6:37.91:43,0,38	0/0:24,0:14:0.72:0,1,64	0/0:14,0:12:14.91:0,15,113	1/1:10,11:22:25.44:159,25,0	1/1:5,6:12:15.90:100,16,0	1/1:5,12:17:7.44:135,7,0	1/1:16,15:36:49.78:282,50,0	1/1:8,15:25:22.38:239,22,0	1/1:8,13:22:32.54:212,33,0	1/1:13,8:24:24.54:146,25,0	0/1:11,1:13:5.23:5,0,99	1/1:7,12:19:29.41:191,29,0	0/1:6,6:13:12.72:49,0,13	1/1:6,7:13:14.68:96,15,0	1/1:3,7:11:18.78:108,19,0	1/1:11,18:32:29.58:298,30,0	1/1:13,14:28:37.37:236,37,0	1/1:4,6:12:19.60:119,20,0	1/1:9,12:22:31.37:198,31,0	1/1:8,8:17:19.68:121,20,0	1/1:8,9:20:20.68:114,21,0	0/0:21,0:22:20.15:0,20,200	0/0:26,2:28:27.40:0,27,475	1/1:5,6:12:16.73:102,17,0	0/1:28,3:32:9.52:10,0,275	1/1:11,10:24:7.38:132,7,0	0/0:5,0:5:15:0,15,131
chr10	37463730	.	ACCCGGAC	A	1721.44	PASS	AC=2;AF=0.037;AN=54;BaseQRankSum=7.272;DP=732;FS=8.493;HRun=0;HaplotypeScore=171.2716;InbreedingCoeff=0.9995;MQ=80.20;MQ0=0;MQRankSum=-8.115;QD=68.86;ReadPosRankSum=1.743;VQSLOD=3.2614;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,157,6207	0/0:10,0:10:30.10:0,30,1208	0/0:22,0:22:65.43:0,65,2224	0/0:25,0:25:69.06:0,69,2318	0/0:35,0:35:99:0,102,3839	0/0:23,0:23:66.21:0,66,2561	0/0:22,0:22:60.19:0,60,2209	0/0:30,0:30:84.29:0,84,3342	0/0:24,0:24:72.23:0,72,2744	0/0:21,0:21:54.19:0,54,2157	0/0:26,0:26:75.24:0,75,2870	0/0:21,0:21:63.17:0,63,2431	0/0:21,0:21:63.22:0,63,2470	0/0:22,0:22:63.22:0,63,2541	0/0:23,0:23:63.22:0,63,2543	0/0:19,0:19:57.19:0,57,2177	0/0:42,0:42:99:0,126,4886	0/0:36,0:36:99:0,102,3962	0/0:18,0:18:54.19:0,54,2154	0/0:30,0:30:87.29:0,87,3376	0/0:52,0:52:99:0,156,6111	0/0:22,0:22:63.22:0,63,2534	0/0:21,0:21:63.22:0,63,2464	0/0:38,0:38:99:0,105,4039	0/0:25,0:24:72.25:0,72,2766	1/1:3,22:25:69.24:1816,69,0	0/0:27,0:27:75.64:0,76,2821	./.
chr10	37465080	.	TAAAAGAGA	T	7910.52	PASS	AB=0.768;AC=20;AF=0.357;AN=56;BaseQRankSum=8.670;DP=551;FS=76.803;HRun=0;HaplotypeScore=147.6266;InbreedingCoeff=-0.5609;MQ=54.70;MQ0=5;MQRankSum=-9.447;QD=18.75;ReadPosRankSum=-0.331;VQSLOD=1.4502;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:17,9:25:99:358,0,1862	0/1:9,1:10:58.56:59,0,962	0/0:24,0:17:43.84:0,44,1629	0/0:29,0:19:42.85:0,43,1170	0/1:17,12:28:99:424,0,1642	0/1:23,10:33:99:706,0,2605	0/1:10,5:15:99:313,0,1037	0/1:22,5:27:99:237,0,2362	0/1:12,5:17:99:306,0,1376	0/1:20,6:26:99:416,0,2229	0/1:14,9:23:99:558,0,1289	0/0:16,0:16:39.11:0,39,1209	0/1:6,2:8:99:127,0,644	0/1:17,3:20:50.69:51,0,2015	0/1:6,3:9:99:302,0,580	0/1:15,5:20:99:297,0,1570	0/1:8,11:19:99:760,0,859	0/1:5,3:8:99:157,0,605	0/1:12,8:20:99:484,0,1193	0/1:21,7:28:99:479,0,2014	0/0:4,0:4:12.04:0,12,499	0/1:11,6:17:99:478,0,1134	0/0:14,0:13:34.06:0,34,1012	0/0:8,0:8:24.08:0,24,878	0/1:33,11:44:99:669,0,3463	0/0:29,0:29:87.28:0,87,3197	0/1:13,10:23:99:733,0,1542	0/0:4,0:4:12.04:0,12,442
chr10	37465088	.	AT	A	461.05	PASS	AB=0.919;AC=5;AF=0.089;AN=56;BaseQRankSum=-0.007;DP=542;FS=13.772;HRun=12;HaplotypeScore=111.4877;InbreedingCoeff=0.6585;MQ=56.52;MQ0=5;MQRankSum=4.488;QD=6.99;ReadPosRankSum=2.150;VQSLOD=0.9429;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,1:27:15.85:0,16,342	0/0:8,0:9:17.90:0,18,166	0/0:23,1:16:9.32:0,9,202	0/0:24,1:16:13.79:0,14,122	0/0:26,1:26:6.17:0,6,216	0/1:31,3:34:10.69:11,0,413	0/0:14,0:14:27.47:0,27,256	0/0:29,0:29:52.89:0,53,511	0/0:15,1:17:9.41:0,9,228	0/0:28,0:28:28.42:0,28,456	0/0:21,0:22:31.84:0,32,291	0/0:6,0:18:37.53:0,38,220	0/0:8,0:8:12.36:0,12,107	0/0:21,0:21:41.85:0,42,415	0/0:8,0:9:17.87:0,18,164	0/0:18,0:18:27.50:0,28,267	0/0:19,0:19:18.51:0,19,185	0/0:8,0:8:12.50:0,12,123	0/0:18,0:19:29.21:0,29,254	0/0:27,0:28:29.44:0,29,379	0/0:5,0:5:12.02:0,12,122	0/0:14,0:14:21:0,21,192	0/0:5,0:12:22.76:0,23,115	0/0:2,0:7:14.20:0,14,72	0/0:38,0:39:70.80:0,71,670	1/1:6,22:28:38.27:480,38,0	0/0:26,0:26:27.97:0,28,270	1/1:0,4:4:11.95:93,12,0
chr10	37467284	.	A	AT	892.21	PASS	AB=1.000;AC=6;AF=0.107;AN=56;BaseQRankSum=0.933;DP=628;FS=4.404;HRun=8;HaplotypeScore=83.1115;InbreedingCoeff=0.5194;MQ=74.02;MQ0=8;MQRankSum=1.533;QD=8.58;ReadPosRankSum=-2.443;VQSLOD=1.5336;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:44.18:0,44,342	0/0:3,0:3:5.79:0,6,52	0/0:53,0:22:33.41:0,33,299	0/1:42,0:17:9.91:10,0,48	0/0:38,0:38:62.02:0,62,549	0/0:17,0:17:35.78:0,36,284	0/0:16,0:16:33.52:0,34,330	0/0:35,0:35:53.43:0,53,599	0/1:22,0:22:8.57:9,0,188	0/0:26,0:25:53.87:0,54,479	0/0:27,0:27:65.25:0,65,532	0/0:17,0:17:25.08:0,25,205	0/0:8,0:8:23.39:0,23,176	0/0:13,0:13:21.95:0,22,193	0/0:22,0:22:33.39:0,33,277	0/0:15,0:15:32.87:0,33,280	0/0:30,0:30:34.66:0,35,324	0/0:31,0:31:48.24:0,48,423	0/0:21,1:22:1.20:0,1,375	0/0:20,0:20:43.94:0,44,348	0/0:10,0:10:15.01:0,15,137	0/0:16,0:16:26.99:0,27,241	0/0:20,0:20:41.37:0,41,380	0/0:15,0:14:28.29:0,28,271	0/0:19,0:19:29.94:0,30,263	1/1:14,22:36:89.44:932,89,0	0/0:23,0:23:27.14:0,27,252	1/1:4,0:4:6.02:65,6,0
chr10	37467645	.	A	AT	14195.26	PASS	AB=0.770;AC=52;AF=0.929;AN=56;BaseQRankSum=-6.089;DP=586;FS=5.733;HRun=9;HaplotypeScore=57.4991;InbreedingCoeff=0.4632;MQ=76.56;MQ0=0;MQRankSum=-5.418;QD=24.90;ReadPosRankSum=2.748;VQSLOD=5.7710;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,33:34:90.24:996,90,0	1/1:1,6:7:15:152,15,0	0/1:19,1:19:16.64:17,0,104	0/0:16,0:13:15.72:0,16,156	1/1:3,27:31:61.03:860,61,0	1/1:5,25:30:17.10:645,17,0	1/1:1,25:26:66.18:730,66,0	1/1:11,23:34:66.15:712,66,0	1/1:2,13:15:36.10:398,36,0	1/1:1,19:20:57.14:620,57,0	1/1:4,18:22:48.05:502,48,0	1/1:1,26:27:66.18:730,66,0	1/1:1,16:17:42.11:465,42,0	1/1:4,11:15:3.97:257,4,0	1/1:4,26:30:72.19:797,72,0	1/1:3,10:13:27.07:299,27,0	1/1:3,14:18:21.91:453,22,0	1/1:2,12:14:33.09:365,33,0	1/1:6,10:16:33.07:356,33,0	1/1:0,23:23:60.11:648,60,0	1/1:3,12:15:33.09:365,33,0	1/1:3,19:21:43.85:442,44,0	1/1:3,18:21:28.01:524,28,0	1/1:1,25:26:69.19:763,69,0	0/1:3,7:10:1.99:208,0,2	1/1:4,26:30:75.20:829,75,0	1/1:0,28:28:78.68:863,79,0	1/1:0,6:6:18.05:199,18,0
chr10	37467853	.	AGAAGGGGAG	A	7728.49	PASS	AB=0.824;AC=42;AF=0.750;AN=56;BaseQRankSum=5.212;DP=635;FS=1.167;HRun=0;HaplotypeScore=135.0416;InbreedingCoeff=0.6750;MQ=53.24;MQ0=25;MQRankSum=0.073;QD=17.02;ReadPosRankSum=0.810;VQSLOD=3.7381;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,31:39:24.04:553,24,0	1/1:5,0:3:6.02:126,6,0	0/0:66,0:16:18.48:0,18,184	0/0:52,0:18:11.56:0,12,132	1/1:6,16:21:38.70:383,39,0	0/1:11,13:24:21.05:403,0,21	1/1:11,6:17:3.01:84,3,0	1/1:25,0:24:15.02:145,15,0	1/1:8,16:24:27.09:748,27,0	1/1:6,11:17:33.07:642,33,0	1/1:2,15:17:31.76:415,32,0	0/0:6,0:6:12.04:0,12,296	1/1:2,11:13:12.04:337,12,0	1/1:3,15:18:17.83:504,18,0	1/1:5,12:17:3.01:84,3,0	1/1:5,11:16:6.02:169,6,0	1/1:7,13:20:9.03:252,9,0	1/1:17,2:19:14.49:445,14,0	1/1:13,10:20:27.02:380,27,0	1/1:3,18:21:41.64:449,42,0	1/1:13,0:10:17.96:258,18,0	1/1:5,20:24:47.85:793,48,0	0/0:18,0:17:39.08:0,39,1251	0/0:24,0:24:60.14:0,60,1797	1/1:7,16:23:9.03:120,9,0	0/1:18,0:18:15.88:16,0,856	1/1:14,23:36:15.17:422,15,0	0/0:13,0:13:15.03:0,15,423
chr10	37470286	.	T	TGC	973	PASS	AB=0.873;AC=10;AF=0.185;AN=54;BaseQRankSum=4.850;DP=698;FS=20.509;HRun=0;HaplotypeScore=236.3260;InbreedingCoeff=-0.0327;MQ=33.31;MQ0=7;MQRankSum=-4.471;QD=4.70;ReadPosRankSum=3.373;VQSLOD=1.6134;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:18,1:19:0.35:0,0,3	0/0:11,5:16:1.98:0,2,48	0/0:24,0:4:11.52:0,12,123	./.	0/0:41,9:49:0.82:0,1,45	0/1:15,5:19:17.64:18,0,44	0/0:27,1:28:18.97:0,19,322	0/0:28,0:28:56.16:0,56,711	0/0:22,0:22:16.47:0,16,121	0/1:40,14:52:99:831,0,992	0/1:20,4:24:0:0,0,0	0/0:34,1:35:32.45:0,32,404	0/0:12,1:13:0.58:0,1,28	0/0:22,0:22:0.15:0,0,52	0/0:23,0:23:8.79:0,9,42	0/1:24,1:22:25.35:25,0,117	0/0:9,1:10:11.98:0,12,170	1/1:4,0:4:1.21:18,1,0	0/0:7,0:6:16.71:0,17,180	0/0:30,4:34:4.26:0,4,93	0/0:12,0:12:0:0,0,1	0/0:31,13:43:2.26:0,2,45	0/0:37,7:44:18.40:0,18,336	0/0:32,0:31:30.85:0,31,440	0/0:19,7:26:1.17:0,1,4	0/1:30,3:33:75.18:75,0,1243	0/1:16,0:16:13.36:13,0,200	0/1:7,5:12:99:110,0,244
chr10	37470417	.	GTATACACA	G	1068	PASS	AB=0.910;AC=17;AF=0.304;AN=56;BaseQRankSum=12.136;DP=686;FS=54.002;HRun=0;HaplotypeScore=405.9888;InbreedingCoeff=-0.3062;MQ=36.22;MQ0=4;MQRankSum=-6.041;QD=2.35;ReadPosRankSum=-3.652;VQSLOD=-0.3359;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:15,1:16:4.25:4,0,213	0/0:8,3:11:8.60:0,9,148	0/0:19,0:3:1.66:0,2,165	0/0:17,0:4:3.69:0,4,128	0/0:31,10:42:8.04:0,8,648	0/1:23,3:26:22.70:32,0,23	0/1:23,2:25:17.22:17,0,903	0/0:24,0:24:31.25:0,31,2011	0/1:31,0:31:38.03:38,0,461	0/1:31,6:36:99:572,0,1930	0/1:19,8:26:6.80:7,0,123	0/1:37,0:37:4.64:5,0,587	0/0:27,0:27:10.27:0,10,734	0/1:17,1:18:0.89:1,0,113	1/1:20,0:20:8.39:40,8,0	0/1:32,0:31:19.91:20,0,642	0/0:14,0:13:9.96:0,10,757	0/0:7,0:7:21.07:0,21,815	0/0:8,0:8:21.07:0,21,693	0/1:30,13:43:25.02:25,0,254	0/0:8,0:8:3.65:0,4,116	0/1:34,8:42:27.46:27,0,116	0/0:22,12:34:3.40:0,3,263	0/0:21,0:20:17.40:0,17,796	0/1:27,10:37:23.20:23,0,118	0/1:36,4:40:99:363,0,2386	0/1:18,0:18:27.63:28,0,782	0/1:5,0:5:15.15:15,0,240
chr10	37470420	.	TACAC	T	1028.92	PASS	AB=0.876;AC=18;AF=0.321;AN=56;BaseQRankSum=12.809;DP=701;FS=49.952;HRun=0;HaplotypeScore=395.6158;InbreedingCoeff=-0.2855;MQ=36.08;MQ0=5;MQRankSum=-7.483;QD=2.07;ReadPosRankSum=-4.386;VQSLOD=-0.2862;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:13,4:17:5.36:5,0,158	0/1:10,1:11:0.91:1,0,78	0/0:21,0:4:9.01:0,9,158	0/0:18,0:4:3.44:0,3,84	0/1:36,6:42:17.33:17,0,403	0/1:20,6:26:2.21:94,0,2	0/0:24,3:26:10.93:0,11,570	0/0:25,0:25:38.96:0,39,1578	0/1:26,5:31:51.71:52,0,261	0/1:31,6:36:99:433,0,1323	0/1:25,2:26:13.19:13,0,73	0/1:34,4:38:34.13:34,0,372	0/0:24,2:26:9.79:0,10,547	0/1:17,1:18:0.87:1,0,88	1/1:14,6:20:7.98:47,8,0	0/1:27,4:31:16:16,0,395	0/1:12,2:13:7.55:8,0,464	0/0:8,0:8:24.08:0,24,642	0/0:7,0:7:21.07:0,21,453	0/1:40,4:44:9.81:10,0,209	0/0:7,2:9:1.37:0,1,82	0/1:37,5:42:63.19:63,0,66	0/0:35,2:37:3.35:0,3,165	0/0:17,4:20:17.89:0,18,504	0/1:30,7:37:27.45:27,0,66	0/1:34,6:41:99:309,0,1579	0/1:15,4:19:46.47:46,0,540	0/0:5,0:5:6.41:0,6,169
chr10	37470431	.	A	ATG	8104.38	PASS	AB=0.780;AC=36;AF=0.643;AN=56;BaseQRankSum=-5.793;DP=1058;FS=1.942;HRun=0;HaplotypeScore=639.7432;InbreedingCoeff=-0.1519;MQ=34.22;MQ0=16;MQRankSum=4.034;QD=8.39;ReadPosRankSum=5.222;VQSLOD=2.8846;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:20,7:27:5.01:105,5,0	0/1:22,4:26:1.56:136,0,2	0/0:35,0:4:2.97:0,3,20	0/0:32,0:10:11.59:0,12,111	1/1:39,13:56:10.22:261,10,0	0/1:25,8:35:9.61:36,0,10	1/1:23,21:43:13.27:500,13,0	0/1:18,15:32:56.46:833,0,56	1/1:16,21:38:31.76:435,32,0	0/1:55,15:69:32.95:1261,0,33	0/1:29,10:39:18.50:19,0,34	1/1:29,14:44:8.77:290,9,0	0/1:17,18:35:46.34:323,0,46	0/1:17,12:29:19.36:46,0,19	0/0:15,10:25:13.61:0,14,70	1/1:26,18:40:30.41:392,30,0	1/1:8,11:18:29.82:483,30,0	1/1:8,6:14:38.72:520,39,0	0/1:15,3:14:99:206,0,113	0/1:46,19:64:21.49:142,0,21	1/1:7,6:13:4.66:56,5,0	0/1:45,15:62:40.65:67,0,41	1/1:49,12:60:8.01:166,8,0	1/1:27,3:29:23.09:360,23,0	0/1:42,15:58:43.85:44,0,66	0/1:45,15:60:99:1095,0,169	0/1:21,11:33:69.18:224,0,69	0/1:7,3:9:31.74:105,0,32
chr10	37470435	.	G	GCA	951.42	PASS	AB=0.958;AC=21;AF=0.375;AN=56;BaseQRankSum=-4.044;DP=1086;FS=1.391;HRun=0;HaplotypeScore=535.6867;InbreedingCoeff=-0.4215;MQ=33.39;MQ0=16;MQRankSum=1.406;QD=1.27;ReadPosRankSum=3.553;VQSLOD=-0.0495;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:24,2:27:6.64:7,0,38	0/1:25,1:26:8.29:8,0,69	0/0:34,0:3:6.02:0,6,87	0/0:32,0:10:17.41:0,17,216	0/1:53,6:59:11.58:12,0,24	0/1:35,0:35:5.77:6,0,33	0/1:42,2:43:14.71:15,0,40	0/1:36,0:35:10.13:10,0,409	0/1:39,2:41:38.83:39,0,44	0/1:65,7:70:99:464,0,1219	0/0:41,0:40:11.01:0,11,64	0/1:42,2:45:7.79:8,0,8	0/1:35,1:37:81.41:81,0,109	0/1:29,2:31:10.28:10,0,79	0/0:26,0:26:16.89:0,17,151	0/1:44,0:40:20.59:21,0,37	0/1:23,0:22:24.13:54,0,24	0/1:15,0:15:41.10:41,0,153	0/0:18,1:15:10.36:0,10,301	0/1:61,2:62:9.26:9,0,24	1/1:14,0:14:4.57:22,5,0	0/0:61,4:65:15.34:0,15,138	0/0:54,6:60:15.78:0,16,165	0/1:32,0:30:7.24:7,0,38	0/0:54,3:57:4.87:0,5,117	0/1:58,4:63:99:237,0,1090	0/1:29,3:33:51.44:51,0,293	0/1:9,1:9:2.62:3,0,174
chr10	37470449	.	TTG	T	969.02	PASS	AB=1.000;AC=11;AF=0.204;AN=54;BaseQRankSum=0.488;DP=1138;FS=11.991;HRun=0;HaplotypeScore=539.6213;InbreedingCoeff=0.3854;MQ=33.34;MQ0=19;MQRankSum=-2.569;QD=2.83;ReadPosRankSum=-4.605;VQSLOD=-0.4568;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:32,0:35:19.78:20,0,82	0/1:21,0:26:11.12:11,0,18	0/0:28,0:4:8.90:0,9,105	./.	0/0:63,0:62:29.05:0,29,406	0/0:27,0:38:1.04:0,1,18	0/1:42,0:46:1.26:1,0,119	0/0:40,0:40:29.99:0,30,266	0/0:42,0:42:21.18:0,21,493	0/0:79,0:78:99:0,116,832	0/0:35,0:40:3.22:0,3,51	1/1:35,3:41:42.33:362,42,0	0/0:33,0:45:31.13:0,31,239	0/1:33,0:38:6.87:7,0,100	0/0:18,0:28:19.88:0,20,91	0/0:41,0:38:33.03:0,33,567	0/0:24,0:23:43.58:0,44,581	0/0:11,0:16:27.43:0,27,239	0/0:25,0:20:8.92:0,9,55	0/0:62,0:65:6.73:0,7,155	0/0:16,0:17:8.93:0,9,52	0/0:53,0:59:17.41:0,17,136	1/1:55,7:61:38.16:361,38,0	1/1:26,5:32:31.92:347,32,0	0/1:48,0:57:14.30:14,0,112	0/0:62,0:62:84.96:0,85,623	0/0:30,0:35:28.07:0,28,173	0/0:11,0:11:14.85:0,15,139
chr10	37472601	.	A	AG	469.87	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-0.187;DP=308;FS=0.000;HRun=6;HaplotypeScore=112.1248;InbreedingCoeff=0.7948;MQ=67.77;MQ0=0;MQRankSum=-1.745;QD=17.40;ReadPosRankSum=-0.163;VQSLOD=2.7011;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:42.09:0,42,426	0/0:5,0:5:0.25:0,0,53	0/0:9,0:9:24.03:0,24,237	0/0:10,0:10:20.91:0,21,172	0/0:9,0:9:15.03:0,15,153	0/0:8,0:8:18.04:0,18,183	0/0:23,0:23:49.61:0,50,477	0/0:19,0:19:30.05:0,30,301	0/0:9,0:9:18.04:0,18,183	0/0:14,0:14:36.07:0,36,364	0/0:11,0:11:21.03:0,21,213	1/1:2,7:9:24.04:241,24,0	0/0:8,0:8:10.44:0,10,173	0/0:13,0:13:25.52:0,26,291	0/0:15,0:15:35.61:0,36,355	0/0:2,0:2:3.01:0,3,31	0/0:18,0:18:30.06:0,30,302	0/0:14,0:14:30.07:0,30,305	0/0:12,0:12:36.07:0,36,358	0/0:4,0:4:12.03:0,12,122	0/0:11,0:11:15.48:0,15,146	0/0:11,0:11:15.84:0,16,206	1/1:0,6:6:14.88:168,15,0	1/1:2,10:12:18.05:198,18,0	0/0:11,0:11:18.04:0,18,181	0/0:9,0:9:24.05:0,24,245	0/0:9,0:9:27.06:0,27,275	0/0:6,0:6:9.02:0,9,92
chr10	37474310	.	GCACA	G	16716.05	PASS	AC=52;AF=1.000;AN=52;BaseQRankSum=0.010;DP=713;FS=0.000;HRun=0;HaplotypeScore=180.4603;InbreedingCoeff=-0.0048;MQ=57.30;MQ0=7;MQRankSum=0.535;QD=24.84;ReadPosRankSum=0.735;VQSLOD=4.3389;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,29:41:70.75:1112,71,0	1/1:0,13:14:36.08:544,36,0	./.	./.	1/1:6,24:31:20.72:694,21,0	1/1:7,17:25:42.14:683,42,0	1/1:22,19:41:48.45:618,48,0	1/1:6,17:24:54.07:767,54,0	1/1:11,20:32:42.14:666,42,0	1/1:9,20:29:60.62:910,61,0	1/1:4,14:19:26.92:434,27,0	1/1:4,23:27:45.62:743,46,0	1/1:2,8:10:18.06:297,18,0	1/1:9,22:32:57.15:909,57,0	1/1:5,12:18:33.11:523,33,0	1/1:5,9:14:21.03:317,21,0	1/1:13,22:36:69.23:1138,69,0	1/1:8,25:33:54.18:891,54,0	1/1:10,10:20:30.02:427,30,0	1/1:4,17:22:42.11:664,42,0	1/1:22,25:49:33.27:708,33,0	1/1:4,23:29:38.72:643,39,0	1/1:2,11:13:20.74:334,21,0	1/1:13,30:45:72.24:1167,72,0	1/1:7,9:17:24.07:374,24,0	1/1:5,0:24:51.06:487,51,0	1/1:6,13:19:39.09:608,39,0	1/1:4,0:8:6.01:56,6,0
chr10	37474615	.	GA	G	7664.90	PASS	AB=0.672;AC=44;AF=0.786;AN=56;BaseQRankSum=-1.532;DP=635;FS=1.026;HRun=12;HaplotypeScore=65.8928;InbreedingCoeff=0.4873;MQ=58.59;MQ0=27;MQRankSum=2.617;QD=13.91;ReadPosRankSum=2.681;VQSLOD=5.4819;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,19:25:30.38:399,30,0	1/1:2,9:11:14.37:122,14,0	0/0:24,0:3:6.01:0,6,60	0/1:19,0:4:8.26:8,0,23	1/1:14,21:34:21.46:470,21,0	1/1:4,20:24:14.39:295,14,0	1/1:6,17:23:41.82:325,42,0	1/1:15,25:35:14.31:468,14,0	1/1:4,17:21:14.40:294,14,0	1/1:2,23:26:64.71:489,65,0	1/1:2,15:16:38.69:292,39,0	0/0:19,0:18:43.64:0,44,430	1/1:1,14:14:29.89:232,30,0	1/1:3,21:24:47.12:370,47,0	0/1:4,17:21:22.03:217,0,22	1/1:5,21:25:29.32:410,29,0	1/1:2,17:21:45.22:336,45,0	1/1:10,21:29:29.96:411,30,0	1/1:9,13:19:16.39:277,16,0	1/1:5,20:25:37.20:397,37,0	0/1:5,17:22:32.81:254,0,33	1/1:3,14:17:0.87:237,1,0	0/0:22,0:22:23.08:0,23,341	0/0:16,2:18:4.35:0,4,364	1/1:3,20:23:46.84:354,47,0	1/1:3,21:25:59.45:485,59,0	1/1:3,19:22:45.43:386,45,0	0/1:5,8:13:11.51:136,0,12
chr10	37477554	.	T	TG	129.74	PASS	AC=8;AF=0.190;AN=42;BaseQRankSum=3.396;DP=285;FS=1.518;HRun=0;HaplotypeScore=39.3040;InbreedingCoeff=0.5924;MQ=73.23;MQ0=9;MQRankSum=-0.515;QD=3.82;ReadPosRankSum=-2.809;VQSLOD=2.4853;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:14:5.98:0,6,47	./.	0/0:30,0:24:71.60:0,72,948	0/0:24,0:17:42.86:0,43,633	./.	0/0:13,0:13:3.01:0,3,42	0/0:6,0:5:3.01:0,3,42	0/0:7,0:7:21.06:0,21,276	1/1:8,4:12:3.01:42,3,0	0/0:13,0:13:39.13:0,39,544	0/0:8,0:8:9.03:0,9,126	0/0:26,0:26:69.23:0,69,959	1/1:7,2:9:6.02:80,6,0	./.	./.	0/0:8,0:8:3.01:0,3,42	0/0:5,0:5:3.01:0,3,42	0/0:10,0:9:18.06:0,18,251	0/0:7,0:7:21.07:0,21,293	./.	./.	1/1:4,1:5:3.01:41,3,0	0/0:12,0:12:33.11:0,33,461	0/0:11,0:11:30.10:0,30,419	1/1:6,2:8:6.02:84,6,0	0/0:11,0:11:33.09:0,33,442	0/0:7,0:6:12.03:0,12,150	./.
chr10	37478313	.	CCAAA	C	433.45	PASS	AB=0.800;AC=8;AF=0.148;AN=54;BaseQRankSum=2.440;DP=311;FS=7.517;HRun=0;HaplotypeScore=68.9212;InbreedingCoeff=0.2653;MQ=74.78;MQ0=16;MQRankSum=-0.511;QD=8.67;ReadPosRankSum=0.727;VQSLOD=1.4152;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:19:42.07:0,42,388	0/0:3,0:3:8.99:0,9,129	0/0:35,0:17:28.35:0,28,347	0/0:39,0:24:52.15:0,52,521	0/1:0,6:6:0:0,0,0	0/0:20,0:20:36.39:0,36,523	0/0:15,0:14:31.76:0,32,326	0/0:24,0:24:68.79:0,69,598	0/1:0,0:2:0:0,0,0	0/0:7,0:7:14.97:0,15,202	0/0:4,0:4:8.82:0,9,62	0/1:3,0:3:9.89:10,0,39	0/0:3,0:1:0.89:0,1,2	0/0:2,0:2:2.76:0,3,24	0/0:5,0:5:9.43:0,9,70	1/1:3,0:6:13.58:144,14,0	0/1:14,5:20:16.68:370,0,17	0/0:17,0:17:44.03:0,44,398	0/0:14,0:13:35.68:0,36,370	0/0:5,0:5:15.01:0,15,134	0/0:24,0:24:56.96:0,57,570	./.	0/1:2,0:2:13.84:14,0,21	0/1:11,0:10:15.90:16,0,105	0/0:5,0:5:9.91:0,10,157	0/0:5,0:5:11.86:0,12,175	0/0:3,0:3:8.98:0,9,119	0/0:9,0:8:18.02:0,18,262
chr10	37478316	.	A	AACAC	1299.17	PASS	AB=1.000;AC=23;AF=0.605;AN=38;BaseQRankSum=-2.806;DP=323;FS=0.000;HRun=0;HaplotypeScore=71.1139;InbreedingCoeff=0.5544;MQ=65.51;MQ0=18;MQRankSum=0.415;QD=7.02;ReadPosRankSum=-1.830;VQSLOD=1.2728;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:21:9.02:146,9,0	./.	./.	./.	0/0:6,0:6:0.47:0,0,1	1/1:19,0:21:21.05:300,21,0	1/1:12,2:18:6.02:122,6,0	1/1:26,0:26:11.27:100,11,0	./.	1/1:9,0:9:12.04:194,12,0	./.	0/0:2,0:3:3:0,3,28	1/1:3,0:1:3.01:46,3,0	./.	1/1:5,0:5:2.07:47,2,0	0/0:6,0:6:8.89:0,9,83	0/0:20,0:20:11.84:0,12,111	1/1:17,2:19:15.52:262,16,0	1/1:15,0:14:3:28,3,0	./.	1/1:19,8:27:3.01:70,3,0	./.	0/0:2,0:3:3:0,3,28	0/1:11,0:10:0:0,0,0	1/1:1,1:6:8.76:113,9,0	0/0:4,0:4:3.01:0,3,46	./.	0/0:7,0:6:5.99:0,6,67
chr10	37478391	.	CTAAT	C	3703.47	PASS	AB=0.762;AC=47;AF=0.904;AN=52;BaseQRankSum=5.316;DP=224;FS=4.250;HRun=0;HaplotypeScore=48.7427;InbreedingCoeff=0.3599;MQ=64.44;MQ0=7;MQRankSum=-2.764;QD=18.61;ReadPosRankSum=1.050;VQSLOD=2.7645;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,0:14:21.02:196,21,0	1/1:0,2:2:3.01:48,3,0	./.	./.	1/1:0,7:6:15.05:239,15,0	1/1:6,0:12:18.02:168,18,0	1/1:5,0:9:12.01:112,12,0	0/1:22,10:32:28.71:413,0,29	1/1:2,1:3:3.01:48,3,0	1/1:0,0:2:6.01:56,6,0	1/1:0,0:3:3:28,3,0	1/1:0,0:1:3:28,3,0	1/1:1,1:1:3.01:48,3,0	1/1:1,3:4:9.03:144,9,0	1/1:1,0:3:6.01:56,6,0	1/1:1,5:6:9.03:144,9,0	1/1:4,12:16:33.11:527,33,0	1/1:8,0:15:15.02:140,15,0	1/1:22,7:24:21.07:335,21,0	1/1:0,4:4:9.03:144,9,0	1/1:6,3:9:9.03:144,9,0	1/1:0,1:1:3.01:48,3,0	1/1:1,0:3:6.01:56,6,0	1/1:1,0:6:6.48:57,6,0	1/1:1,6:7:18.06:287,18,0	0/0:10,0:10:21.07:0,21,503	1/1:1,6:6:15.05:239,15,0	0/0:6,0:6:12.04:0,12,287
chr10	37479483	.	A	AACC	1262.56	PASS	AB=0.964;AC=17;AF=0.304;AN=56;BaseQRankSum=15.205;DP=505;FS=15.844;HRun=0;HaplotypeScore=169.2892;InbreedingCoeff=-0.3036;MQ=47.38;MQ0=2;MQRankSum=-12.733;QD=3.96;ReadPosRankSum=-1.495;VQSLOD=1.4510;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:26:32.99:33,0,434	0/1:10,0:10:7.97:8,0,202	0/0:16,0:13:36.08:0,36,493	0/0:17,0:15:42.14:0,42,633	0/1:13,0:13:59.46:59,0,223	0/0:13,0:13:28.74:0,29,453	0/1:20,6:26:99:447,0,538	0/1:21,4:23:99:194,0,475	0/1:31,0:31:0.41:0,0,525	0/1:15,0:15:23.42:23,0,196	0/1:18,0:18:45.29:45,0,314	0/0:21,0:21:63.21:0,63,1049	0/1:22,0:22:99:122,0,415	0/1:21,0:21:66.62:67,0,315	0/1:21,0:21:60.41:60,0,293	0/1:20,1:21:81.32:81,0,444	0/0:15,0:15:26.36:0,26,441	0/1:15,1:16:42.02:42,0,352	0/0:18,0:16:35.23:0,35,421	0/0:8,0:7:5.51:0,6,171	0/1:21,3:24:99:152,0,705	0/0:9,0:9:17.04:0,17,303	0/0:13,0:13:36.12:0,36,615	0/0:15,0:15:42.14:0,42,710	0/0:17,0:17:17.95:0,18,404	0/1:23,0:22:75.34:75,0,336	0/0:22,2:23:22.10:0,22,466	1/1:7,0:7:2.61:7,3,0
chr10	37479503	.	C	CA	2128.99	PASS	AB=0.712;AC=23;AF=0.411;AN=56;BaseQRankSum=13.277;DP=481;FS=4.020;HRun=2;HaplotypeScore=158.4552;InbreedingCoeff=-0.3341;MQ=53.99;MQ0=1;MQRankSum=-9.089;QD=6.53;ReadPosRankSum=9.579;VQSLOD=0.2089;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:8,14:22:52.81:135,0,53	1/1:3,5:8:0.22:109,0,0	0/0:24,0:19:29.53:0,30,556	0/0:20,0:16:41.89:0,42,468	1/1:4,3:7:3.15:52,3,0	0/1:8,3:11:41.58:42,0,58	0/1:20,7:27:95.29:95,0,168	0/0:30,0:28:28.52:0,29,246	0/1:11,17:28:99:270,0,109	0/1:7,8:15:26.76:138,0,27	0/1:12,7:19:36.71:100,0,37	0/0:21,0:21:49.86:0,50,261	0/1:9,9:18:62.97:124,0,63	0/1:5,11:16:12.35:197,0,12	1/1:6,11:17:10.75:218,11,0	0/1:11,10:21:77.74:157,0,78	0/1:9,4:13:36.67:37,0,85	0/1:10,5:15:86.90:98,0,87	0/1:13,6:17:68.23:96,0,68	0/1:4,3:6:17.01:44,0,17	0/1:19,2:21:63.75:64,0,150	0/1:6,3:9:44.28:66,0,44	0/0:12,0:12:33.59:0,34,162	0/0:17,0:17:35.20:0,35,177	0/1:6,7:13:58.44:104,0,58	0/0:24,0:23:48.88:0,49,297	0/1:11,9:18:30.03:151,0,30	0/0:7,0:7:10.70:0,11,43
chr10	37479506	.	C	CAAACAAA	18104.31	PASS	AB=0.710;AC=29;AF=0.518;AN=56;BaseQRankSum=6.012;DP=476;FS=9.749;HRun=0;HaplotypeScore=150.1110;InbreedingCoeff=-0.3108;MQ=56.10;MQ0=1;MQRankSum=-11.239;QD=45.49;ReadPosRankSum=9.953;VQSLOD=2.9664;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:9,14:23:17.74:1092,0,18	0/1:3,5:8:33.15:492,0,33	0/0:27,0:21:54.16:0,54,1266	0/0:19,0:14:35.26:0,35,815	1/1:5,3:8:18.06:426,18,0	0/1:8,3:11:62.08:333,0,62	0/1:21,7:28:99:1214,0,151	1/1:28,0:26:32.03:680,32,0	0/1:11,17:28:96.97:1786,0,97	1/1:6,8:14:27.37:944,27,0	0/1:12,7:19:61.43:680,0,61	0/0:20,0:20:39.89:0,40,437	0/1:9,8:18:33.89:1055,0,34	0/1:4,11:15:21.01:1107,0,21	1/1:5,11:16:13.59:1214,14,0	0/1:11,10:21:99:1085,0,127	0/1:8,4:12:51.88:347,0,52	0/1:9,5:14:2.94:789,0,3	0/1:15,6:19:39.08:811,0,39	0/1:3,3:5:2.46:350,0,2	0/1:19,2:21:99:301,0,277	0/1:4,3:7:60.33:200,0,60	0/0:12,0:12:23.89:0,24,259	0/1:18,0:18:38.07:38,0,239	0/1:6,7:13:58.13:737,0,58	0/1:2,0:22:26.11:1050,0,26	0/1:10,8:17:8.85:1038,0,9	1/1:0,0:7:12.04:335,12,0
chr10	37479509	.	A	AACAAACAA	28865.98	PASS	AB=1.000;AC=49;AF=0.875;AN=56;BaseQRankSum=-4.275;DP=470;FS=0.521;HRun=0;HaplotypeScore=138.4775;InbreedingCoeff=0.4837;MQ=58.16;MQ0=2;MQRankSum=-9.916;QD=68.57;ReadPosRankSum=0.035;VQSLOD=4.7225;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:22:48.16:1515,48,0	1/1:6,0:6:18.06:677,18,0	0/0:29,0:23:54.10:0,54,1014	0/0:20,0:14:13.80:0,14,519	1/1:9,0:9:18.06:566,18,0	1/1:11,0:11:24.05:688,24,0	1/1:28,0:28:66.18:2162,66,0	1/1:29,0:27:69.11:1060,69,0	1/1:28,0:28:81.24:2815,81,0	1/1:13,0:13:39.12:1242,39,0	1/1:12,5:18:30.05:990,30,0	0/1:18,0:18:42.96:43,0,357	1/1:18,0:18:51.13:1667,51,0	1/1:15,0:15:42.14:1652,42,0	1/1:17,0:17:42.14:1587,42,0	1/1:21,0:21:51.18:2029,51,0	1/1:13,0:13:24.08:625,24,0	1/1:14,0:14:39.13:1197,39,0	1/1:20,0:18:48.14:1295,48,0	1/1:6,0:5:12.04:421,12,0	1/1:18,0:18:33.11:881,33,0	1/1:7,0:7:18.03:466,18,0	0/1:12,0:12:56.64:57,0,207	0/1:18,0:18:99:241,0,237	1/1:14,0:14:30.10:1063,30,0	1/1:21,0:20:54.18:1926,54,0	1/1:19,0:17:45.11:1486,45,0	1/1:6,0:6:12.04:515,12,0
chr10	37479514	.	ACTTACTTTCCCTGCCTCCCATGC	A	32.51	PASS	AB=0.952;AC=6;AF=0.107;AN=56;BaseQRankSum=-3.691;DP=464;FS=4.950;HRun=0;HaplotypeScore=348.5831;InbreedingCoeff=-0.1194;MQ=61.18;MQ0=3;MQRankSum=2.880;QD=0.45;ReadPosRankSum=-6.663;VQSLOD=0.5880;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:18.19:0,18,2384	0/0:6,0:6:15.02:0,15,991	0/0:31,0:22:66.23:0,66,4585	0/0:25,0:17:45.23:0,45,2807	0/1:11,0:11:8.02:8,0,837	0/1:8,0:8:17.82:18,0,544	0/0:23,0:23:54.07:0,54,3482	0/0:28,0:26:71.28:0,71,4859	0/0:27,0:27:9.17:0,9,3563	0/0:14,0:14:30.60:0,31,3049	0/1:19,0:19:8.21:8,0,1662	0/0:18,0:18:54.17:0,54,4376	0/0:17,0:17:38.38:0,38,2678	0/0:14,0:14:7.90:0,8,2358	0/0:16,0:16:45.15:0,45,3008	0/0:18,0:18:32.41:0,32,2518	0/0:11,0:11:21.03:0,21,1531	0/0:14,0:14:39.06:0,39,2516	0/0:19,0:17:45.08:0,45,2326	0/1:6,4:10:88.38:88,0,828	0/0:15,0:15:12.71:0,13,616	0/1:7,0:7:9.47:9,0,45	0/0:13,0:13:39.13:0,39,3672	0/0:18,0:18:51.18:0,51,4398	0/0:13,0:13:32.86:0,33,1698	0/0:22,0:21:60.18:0,60,4251	0/1:18,0:16:15.81:16,0,1849	0/0:6,0:6:15.05:0,15,650
chr10	37479966	.	GC	G	1699.07	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=4.322;DP=612;FS=9.921;HRun=3;HaplotypeScore=69.7234;InbreedingCoeff=0.9998;MQ=84.22;MQ0=0;MQRankSum=-0.768;QD=29.81;ReadPosRankSum=1.775;VQSLOD=2.9870;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:56:99:0,159,2240	0/0:14,0:14:39.13:0,39,559	0/0:18,0:18:48.16:0,48,674	0/0:23,0:23:56.86:0,57,748	0/0:20,0:20:57.18:0,57,799	0/0:18,0:18:54.17:0,54,759	0/0:23,0:23:69.21:0,69,958	0/0:24,0:24:63.20:0,63,891	0/0:31,0:31:93.30:0,93,1316	0/0:18,0:18:54.18:0,54,777	0/0:16,0:16:45.15:0,45,645	1/1:1,24:25:66.17:801,66,0	0/0:18,0:18:51.15:0,51,714	0/0:16,0:16:48.12:0,48,651	0/0:17,0:17:45.14:0,45,629	0/0:20,0:20:60.19:0,60,847	0/0:32,0:32:96.32:0,96,1382	0/0:31,0:31:93.31:0,93,1339	0/0:21,0:21:57.17:0,57,787	0/0:20,0:20:60.20:0,60,862	0/0:24,0:24:66.19:0,66,926	0/0:13,0:13:39.11:0,39,540	1/1:1,19:20:51.16:632,51,0	1/1:0,12:12:33.10:409,33,0	0/0:18,0:18:51.17:0,51,734	0/0:20,0:20:60.17:0,60,827	0/0:28,0:28:81.23:0,81,1118	0/0:16,0:16:48.16:0,48,691
chr10	37481138	.	GA	G	6984.73	PASS	AB=0.631;AC=44;AF=0.786;AN=56;BaseQRankSum=-0.361;DP=544;FS=2.908;HRun=12;HaplotypeScore=54.8559;InbreedingCoeff=0.7504;MQ=56.94;MQ0=36;MQRankSum=0.387;QD=15.45;ReadPosRankSum=2.530;VQSLOD=5.9273;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,25:28:62.75:488,63,0	1/1:3,10:12:31.92:238,32,0	0/0:24,1:9:24.78:0,25,189	0/0:21,0:3:3.89:0,4,32	1/1:11,19:28:32.30:433,32,0	1/1:7,22:27:32.30:434,32,0	1/1:6,10:15:26.84:209,27,0	1/1:7,20:26:56.70:435,57,0	1/1:3,10:12:32.87:255,33,0	1/1:6,16:22:49.83:377,50,0	0/1:10,12:21:16.07:257,0,16	0/0:10,0:9:14.99:0,15,141	0/1:6,9:13:10.48:102,0,10	1/1:0,5:6:16.98:122,17,0	1/1:5,10:14:26.89:209,27,0	1/1:6,4:7:13.98:99,14,0	1/1:8,32:37:80.68:626,81,0	1/1:5,17:21:20.35:341,20,0	1/1:8,14:21:23.37:300,23,0	1/1:3,18:20:50.80:394,51,0	1/1:2,10:12:29.88:232,30,0	1/1:3,11:13:26.88:209,27,0	0/0:16,0:16:26.87:0,27,242	0/0:18,0:19:35.91:0,36,349	1/1:3,12:15:31.91:238,32,0	1/1:5,13:19:40.86:308,41,0	1/1:1,11:12:28.90:215,29,0	1/1:2,20:21:59.77:464,60,0
chr10	37481518	.	GGTGT	G	5937.26	PASS	AB=0.700;AC=39;AF=0.722;AN=54;BaseQRankSum=-2.622;DP=714;FS=0.000;HRun=0;HaplotypeScore=183.4967;InbreedingCoeff=0.0109;MQ=55.32;MQ0=12;MQRankSum=0.526;QD=9.26;ReadPosRankSum=0.137;VQSLOD=3.8636;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:20,8:30:20.74:309,21,0	1/1:7,6:16:21.06:289,21,0	0/0:26,0:16:0.47:0,0,1	./.	0/1:22,0:31:0.62:1,0,35	1/1:16,4:22:20.88:263,21,0	0/1:13,11:24:27.05:84,0,27	0/1:25,3:24:32.12:56,0,32	0/1:8,2:22:25.69:77,0,26	1/1:25,8:34:18.52:428,19,0	1/1:21,9:30:9.90:247,10,0	1/1:11,0:25:23.34:215,23,0	1/1:9,7:18:18.05:244,18,0	1/1:10,9:20:21.01:282,21,0	1/1:8,16:24:30.10:470,30,0	0/1:7,1:23:17.94:60,0,18	0/1:13,4:31:20.71:161,0,21	0/1:7,8:18:11.12:369,0,11	1/1:18,3:21:14.94:181,15,0	1/1:19,12:33:25.20:401,25,0	0/1:26,19:44:14.27:308,0,14	1/1:9,11:24:17.78:243,18,0	0/0:11,0:20:5.95:0,6,42	0/1:14,0:23:0:0,0,0	1/1:14,14:30:25.57:488,26,0	0/1:17,0:27:39.28:117,0,39	1/1:10,10:23:42.09:573,42,0	0/1:8,0:14:11.92:72,0,12
chr10	37481887	.	A	AT	819.63	PASS	AB=0.849;AC=12;AF=0.214;AN=56;BaseQRankSum=-3.574;DP=533;FS=0.576;HRun=13;HaplotypeScore=64.3281;InbreedingCoeff=0.3675;MQ=61.20;MQ0=4;MQRankSum=-1.049;QD=5.29;ReadPosRankSum=-1.738;VQSLOD=1.6396;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:52.90:0,53,369	0/1:9,1:9:10.01:10,0,85	0/1:16,0:4:3.78:4,0,29	0/0:16,0:13:15.83:0,16,83	0/0:22,0:24:56.76:0,57,378	0/0:19,0:20:46.65:0,47,314	0/0:19,0:19:47.53:0,48,326	0/1:34,1:34:2.11:2,0,308	0/0:20,0:20:43.41:0,43,290	0/0:16,0:17:28.73:0,29,190	0/0:21,0:23:43.13:0,43,291	0/1:2,11:13:5.12:242,0,5	0/0:17,0:16:32.67:0,33,226	0/0:14,0:17:32.83:0,33,201	0/0:14,0:15:25.63:0,26,163	0/0:16,0:16:32.63:0,33,226	0/0:25,0:27:62.49:0,62,408	0/0:13,0:14:38.67:0,39,267	0/1:17,2:22:20.50:20,0,198	0/0:24,0:25:58.53:0,59,396	0/0:9,0:11:15.89:0,16,92	0/0:17,0:18:25.76:0,26,170	1/1:6,9:16:0.27:133,0,0	1/1:3,9:12:21.02:195,21,0	0/0:15,1:17:6.82:0,7,182	1/1:5,13:20:24.14:343,24,0	0/0:26,0:28:49.49:0,49,333	0/1:5,2:7:14.58:22,0,15
chr10	37482134	.	G	GTCTC	7698.62	PASS	AB=0.800;AC=52;AF=0.929;AN=56;BaseQRankSum=-2.512;DP=471;FS=4.817;HRun=0;HaplotypeScore=101.2792;InbreedingCoeff=0.2661;MQ=64.50;MQ0=8;MQRankSum=0.015;QD=18.03;ReadPosRankSum=0.911;VQSLOD=4.4125;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,18:33:20.66:480,21,0	1/1:1,5:6:6.02:145,6,0	0/1:33,0:12:3.21:3,0,9	0/0:44,0:18:8.68:0,9,88	1/1:6,9:15:15.05:308,15,0	1/1:5,6:12:6.02:146,6,0	1/1:6,10:18:23.98:456,24,0	1/1:34,0:34:54.14:826,54,0	1/1:7,11:18:27.09:659,27,0	1/1:15,0:15:24.96:398,25,0	1/1:5,5:10:12.04:277,12,0	1/1:22,0:22:29.91:404,30,0	1/1:6,5:11:3.01:73,3,0	1/1:4,1:12:21.07:400,21,0	1/1:5,7:14:15.05:367,15,0	0/1:5,10:15:31.65:348,0,32	1/1:3,6:10:24.08:584,24,0	1/1:5,7:13:10.58:163,11,0	1/1:10,4:13:18.03:310,18,0	1/1:8,8:16:15.05:311,15,0	1/1:10,7:17:9.03:200,9,0	1/1:3,10:13:6.02:147,6,0	1/1:15,0:15:5.99:50,6,0	1/1:17,0:17:2.28:17,2,0	1/1:2,3:5:3.01:33,3,0	1/1:20,0:20:17.95:175,18,0	1/1:2,10:12:15.05:366,15,0	1/1:7,0:6:3.01:52,3,0
chr10	37482154	.	C	CTCT	3944.85	PASS	AB=0.957;AC=29;AF=0.518;AN=56;BaseQRankSum=3.346;DP=424;FS=7.547;HRun=0;HaplotypeScore=82.3574;InbreedingCoeff=-0.5689;MQ=61.86;MQ0=13;MQRankSum=0.678;QD=12.03;ReadPosRankSum=3.685;VQSLOD=2.6099;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:28,1:28:99:258,0,196	0/1:4,0:5:24.97:82,0,25	0/0:44,0:10:17.11:0,17,129	0/0:35,1:11:20.58:0,21,167	0/1:11,0:12:77.87:196,0,78	0/1:10,0:10:56.16:65,0,56	1/1:12,0:14:1.37:244,1,0	0/1:16,10:29:99:533,0,153	0/1:16,0:16:6.91:282,0,7	0/1:13,0:13:99:253,0,105	0/1:7,0:8:53.42:101,0,53	0/1:22,0:23:57.38:97,0,57	0/1:10,0:9:26.61:27,0,90	1/1:9,0:9:17.67:227,18,0	0/1:13,0:13:46.29:172,0,46	0/1:12,0:12:96.80:200,0,97	0/1:10,0:11:10.68:260,0,11	0/1:9,0:9:17.26:103,0,17	0/1:9,0:8:48.60:165,0,49	0/1:13,0:13:26.50:187,0,26	0/1:18,0:17:62.41:62,0,77	0/1:14,0:14:59.34:59,0,118	1/1:13,0:13:5.99:50,6,0	0/0:15,0:16:3.60:0,4,14	1/1:6,0:6:3:33,3,0	0/1:12,0:12:99:100,0,144	0/1:11,0:11:15.93:175,0,16	0/1:8,0:7:13.20:13,0,141
chr10	37482155	.	C	CTCT	325.85	PASS	AB=0.956;AC=16;AF=0.286;AN=56;BaseQRankSum=5.429;DP=412;FS=6.650;HRun=0;HaplotypeScore=93.4362;InbreedingCoeff=-0.2082;MQ=64.22;MQ0=13;MQRankSum=-0.800;QD=1.71;ReadPosRankSum=2.569;VQSLOD=1.0751;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:26:28.67:0,29,426	0/1:4,1:5:47:47,0,47	0/0:43,0:10:20.60:0,21,114	0/0:37,0:12:19.88:0,20,179	0/1:10,1:11:47.98:48,0,152	0/1:10,0:10:2.55:3,0,93	0/1:13,0:14:14.41:14,0,48	0/1:22,0:22:25.23:25,0,360	0/1:16,0:16:13.87:14,0,60	0/1:13,0:13:35.63:36,0,208	0/1:7,1:8:8.90:9,0,102	0/1:22,0:23:87.96:103,0,88	0/0:10,0:9:8.53:0,9,158	1/1:9,0:9:11.90:67,12,0	0/0:13,0:13:13.74:0,14,133	0/0:12,0:12:5.36:0,5,155	0/1:10,1:11:47.09:47,0,50	0/0:10,0:9:11.37:0,11,118	0/1:9,0:8:23.81:24,0,91	0/1:13,0:13:5.53:6,0,75	0/0:18,0:17:21.37:0,21,226	0/0:14,0:14:7.60:0,8,187	0/0:12,0:12:2.74:0,3,12	0/1:14,0:15:5.49:34,0,5	0/0:6,0:6:5:0,5,25	0/0:12,0:12:10.52:0,11,315	0/1:11,0:11:0.88:1,0,50	0/0:8,0:7:8.88:0,9,203
chr10	37483359	.	CA	C	263.21	PASS	AB=0.817;AC=8;AF=0.143;AN=56;BaseQRankSum=-0.004;DP=585;FS=5.162;HRun=14;HaplotypeScore=83.6605;InbreedingCoeff=0.0005;MQ=68.91;MQ0=3;MQRankSum=0.858;QD=1.65;ReadPosRankSum=1.718;VQSLOD=-0.5471;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,2:35:40.47:0,40,623	0/1:10,2:12:11.09:11,0,186	0/1:24,0:12:1.24:1,0,92	0/1:21,1:13:5.69:6,0,51	0/1:30,5:36:21.66:22,0,325	0/0:16,2:18:24.46:0,24,362	0/0:13,0:13:30:0,30,266	0/0:23,1:25:26.58:0,27,405	0/0:16,1:17:27.77:0,28,226	0/0:22,2:25:15.64:0,16,395	0/0:25,2:27:9.73:0,10,353	0/1:13,2:15:5.15:5,0,223	0/0:15,0:15:26.93:0,27,232	0/0:15,0:15:29.99:0,30,266	0/1:13,2:16:5.99:6,0,252	0/0:24,0:24:34.94:0,35,435	0/0:26,1:30:57.08:0,57,631	0/0:14,0:19:47.99:0,48,397	0/0:15,1:17:15.25:0,15,261	0/0:25,1:33:77.47:0,77,636	0/0:7,0:8:17.86:0,18,154	0/0:25,1:27:24.86:0,25,388	0/0:18,1:19:15.42:0,15,274	0/0:16,0:16:42.02:0,42,378	0/0:15,1:16:9.44:0,9,227	0/1:8,17:28:7.16:228,0,7	0/0:24,1:26:14.61:0,15,375	0/1:1,6:7:2.25:102,0,2
chr10	37485503	.	T	TTGTGTG	629.76	PASS	AB=0.607;AC=5;AF=0.089;AN=56;BaseQRankSum=-1.416;DP=820;FS=0.000;HRun=0;HaplotypeScore=183.3505;InbreedingCoeff=0.8647;MQ=57.23;MQ0=10;MQRankSum=-4.341;QD=10.67;ReadPosRankSum=-2.616;VQSLOD=2.2220;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:49:99:0,106,1802	0/0:10,0:11:24.06:0,24,417	0/0:50,0:23:19.81:0,20,377	0/0:34,0:14:17.59:0,18,220	0/0:35,0:37:97.51:0,98,1745	0/0:20,0:20:48.15:0,48,964	0/0:22,0:23:54.18:0,54,1077	0/0:38,0:38:70.28:0,70,1098	0/0:28,0:28:78:0,78,1544	0/0:27,0:29:72.69:0,73,1395	0/0:26,0:26:69.22:0,69,1300	1/1:2,11:15:6.02:200,6,0	0/0:20,0:20:45.13:0,45,799	0/0:30,0:30:75.01:0,75,1542	0/0:21,0:21:48.14:0,48,884	0/0:23,0:23:69.21:0,69,1335	0/0:44,0:44:99:0,107,1985	0/0:33,0:33:70.13:0,70,1430	0/0:26,0:23:41.68:0,42,874	0/0:25,0:25:63.13:0,63,1054	0/0:54,0:54:99:0,129,2536	0/0:32,0:33:90.23:0,90,1631	1/1:2,22:27:18.06:538,18,0	0/1:6,11:17:0:0,0,0	0/0:28,0:29:72.22:0,72,1374	0/0:28,0:28:72.19:0,72,1326	0/0:35,0:35:90.26:0,90,1766	0/0:14,0:14:27.09:0,27,531
chr10	37486633	.	AT	A	1200.53	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.070;DP=544;FS=4.349;HRun=8;HaplotypeScore=55.9556;InbreedingCoeff=0.9570;MQ=73.23;MQ0=0;MQRankSum=0.561;QD=20.01;ReadPosRankSum=3.232;VQSLOD=3.8100;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:26:72.22:0,72,861	0/0:13,1:14:7.24:0,7,366	0/0:20,0:14:16.51:0,17,122	0/0:19,0:16:13.71:0,14,160	0/0:27,0:27:75.20:0,75,871	0/0:26,0:26:75.17:0,75,861	0/0:13,0:13:39.11:0,39,457	0/0:25,0:25:66.18:0,66,771	0/0:18,0:19:50.97:0,51,567	0/0:19,0:19:51.10:0,51,577	0/0:20,0:20:51.15:0,51,601	1/1:1,17:18:36.05:345,36,0	0/0:13,0:13:33.09:0,33,383	0/0:18,0:18:54.11:0,54,599	0/0:16,0:16:39.08:0,39,435	0/0:16,0:16:45:0,45,487	0/0:19,0:19:55.36:0,55,611	0/0:14,0:14:42.01:0,42,471	0/0:26,0:26:66.17:0,66,752	0/0:21,0:21:60.18:0,60,711	0/0:13,0:13:36.07:0,36,397	0/0:23,0:23:66.15:0,66,753	1/1:3,22:25:49.13:565,49,0	1/1:1,16:17:45.07:434,45,0	0/0:18,0:17:51.12:0,51,577	0/0:31,0:31:84.19:0,84,963	0/0:19,0:19:54.13:0,54,613	0/0:7,0:7:18.06:0,18,215
chr10	37491233	.	T	TTGTG	6770.26	PASS	AB=0.741;AC=45;AF=0.833;AN=54;BaseQRankSum=-1.434;DP=644;FS=10.349;HRun=0;HaplotypeScore=127.1598;InbreedingCoeff=-0.0713;MQ=56.95;MQ0=9;MQRankSum=-0.927;QD=11.04;ReadPosRankSum=-0.761;VQSLOD=3.7294;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:19,19:44:20.70:438,21,0	1/1:5,5:11:8.89:213,9,0	1/1:25,0:16:0.89:2,1,0	./.	1/1:24,0:24:5.81:99,6,0	0/1:7,4:13:36.23:125,0,36	0/1:10,6:23:39.37:366,0,39	1/1:28,0:28:6.01:93,6,0	1/1:13,1:22:21.03:345,21,0	1/1:15,6:24:27.02:441,27,0	1/1:11,8:19:14.94:355,15,0	1/1:21,0:22:6.02:106,6,0	1/1:13,9:26:36.03:684,36,0	0/1:8,8:17:38.09:133,0,38	0/1:14,10:25:26:355,0,26	1/1:22,1:32:24.08:417,24,0	1/1:15,6:23:15.05:336,15,0	0/1:16,6:22:41.39:155,0,41	1/1:18,0:23:15.91:177,16,0	1/1:8,6:16:12.04:273,12,0	1/1:18,11:31:8.77:154,9,0	0/1:21,0:21:25.98:277,0,26	0/0:16,0:16:1.41:0,1,2	1/1:22,0:21:11.43:215,11,0	1/1:15,10:26:18.06:426,18,0	0/1:18,0:27:24.45:92,0,24	1/1:19,14:34:21.54:469,22,0	1/1:2,0:7:5.49:24,5,0
chr10	37491985	.	T	TGGCGGCGGCGGC	3689.79	PASS	AB=1.000;AC=34;AF=0.895;AN=38;BaseQRankSum=-0.718;DP=188;FS=0.000;HRun=0;HaplotypeScore=82.9768;InbreedingCoeff=0.2728;MQ=63.94;MQ0=1;MQRankSum=-1.395;QD=22.36;ReadPosRankSum=0.803;VQSLOD=2.1732;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:4:0.89:2,1,0	1/1:6,0:7:3.89:28,4,0	0/0:5,0:5:3.01:0,3,38	0/1:3,0:3:0:0,0,0	./.	./.	1/1:14,0:14:6.02:189,6,0	./.	1/1:2,0:2:6.02:274,6,0	1/1:6,0:6:6.02:107,6,0	./.	1/1:2,3:5:3.01:176,3,0	1/1:3,0:3:5.38:141,5,0	1/1:7,0:7:3.01:137,3,0	1/1:4,0:4:3.01:137,3,0	1/1:3,0:3:3.01:137,3,0	1/1:23,0:23:15.05:689,15,0	1/1:19,0:18:18.06:678,18,0	./.	./.	1/1:33,0:32:9.96:75,10,0	./.	./.	1/1:12,9:22:15.05:600,15,0	0/1:3,0:3:0:0,0,0	1/1:6,0:6:7.79:194,8,0	1/1:1,0:1:3.01:125,3,0	./.
chr10	37492004	.	G	GGCGGCGGCGGCAGCT	5891.72	PASS	AB=1.000;AC=38;AF=0.792;AN=48;BaseQRankSum=-0.737;DP=209;FS=6.926;HRun=0;HaplotypeScore=84.5398;InbreedingCoeff=0.2272;MQ=58.12;MQ0=2;MQRankSum=-2.858;QD=29.31;ReadPosRankSum=0.990;VQSLOD=2.3718;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,0:5:6.49:95,6,0	1/1:5,0:6:9.93:109,10,0	0/0:4,0:3:6:0,6,100	0/0:3,0:3:2.55:0,3,11	./.	0/1:1,0:1:0:0,0,0	1/1:2,10:27:6.49:293,6,0	1/1:4,0:4:6.02:113,6,0	1/1:1,3:5:5.63:441,6,0	1/1:6,0:6:9.03:234,9,0	0/1:2,0:2:0:0,0,0	0/1:4,0:4:96.33:97,0,96	1/1:5,0:5:15.04:377,15,0	1/1:2,4:9:3.01:221,3,0	1/1:4,0:4:12.04:185,12,0	1/1:0,3:5:3.48:221,3,0	1/1:3,6:24:21.02:1437,21,0	1/1:2,8:22:15.05:1050,15,0	1/1:7,0:6:8.92:109,9,0	./.	1/1:34,0:33:28.74:339,29,0	1/1:3,0:3:0.46:1,0,0	./.	0/1:14,0:14:99:242,0,119	0/1:7,0:7:0.01:0,0,0	0/1:5,0:5:29.20:117,0,29	1/1:0,0:2:3.01:211,3,0	./.
chr10	37492399	.	GCT	G	1372.11	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.387;DP=688;FS=0.658;HRun=0;HaplotypeScore=138.8407;InbreedingCoeff=0.9801;MQ=86.09;MQ0=2;MQRankSum=-9.614;QD=38.11;ReadPosRankSum=0.929;VQSLOD=5.1672;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,154,2854	0/0:4,0:4:12.04:0,12,224	0/0:27,0:27:69.28:0,69,1158	0/0:39,0:36:96.05:0,96,1474	0/0:25,0:25:75.24:0,75,1370	0/0:15,0:15:42.14:0,42,780	0/0:24,0:24:72.25:0,72,1342	0/0:25,0:25:75.25:0,75,1363	0/0:25,0:25:75.24:0,75,1362	0/0:27,0:27:78.27:0,78,1460	0/0:20,0:20:60.21:0,60,1108	0/0:35,0:35:99:0,102,1868	0/0:21,0:21:60.21:0,60,1106	0/0:32,0:32:93.32:0,93,1742	0/0:30,0:30:87.28:0,87,1586	0/0:31,0:31:93.32:0,93,1730	0/0:30,0:30:87.26:0,87,1547	0/0:24,0:24:72.20:0,72,1301	0/0:18,0:18:54.18:0,54,988	0/0:16,0:16:48.16:0,48,898	0/0:38,0:38:99:0,114,2129	0/0:22,0:22:63.22:0,63,1161	0/0:14,0:14:39.12:0,39,697	0/0:29,0:29:84.29:0,84,1559	0/0:12,0:12:36.12:0,36,673	1/1:3,27:30:84.28:1227,84,0	0/0:16,0:16:45.14:0,45,811	1/1:0,6:6:18.06:265,18,0
chr10	37492410	.	TCTC	T	2100.54	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.907;DP=705;FS=2.878;HRun=0;HaplotypeScore=150.3494;InbreedingCoeff=0.9702;MQ=84.32;MQ0=2;MQRankSum=-9.658;QD=52.51;ReadPosRankSum=-0.114;VQSLOD=4.9940;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,160,3895	0/0:4,0:4:9.03:0,9,221	0/0:27,0:27:63.11:0,63,1442	0/0:39,0:35:93.15:0,93,2068	0/0:26,0:26:78.25:0,78,1847	0/0:14,0:14:42.14:0,42,1035	0/0:29,0:29:87.28:0,87,2061	0/0:26,0:26:78.24:0,78,1679	0/0:26,0:26:78.24:0,78,1785	0/0:27,0:27:81.28:0,81,1965	0/0:17,0:17:51.17:0,51,1228	0/0:31,0:31:93.32:0,93,2262	0/0:18,0:18:54.19:0,54,1329	0/0:36,0:36:99:0,108,2497	0/0:30,0:30:90.28:0,90,2113	0/0:28,0:28:84.27:0,84,2016	0/0:27,0:27:78.27:0,78,1918	0/0:28,0:28:84.24:0,84,1937	0/0:21,0:21:63.22:0,63,1508	0/0:17,0:17:51.17:0,51,1175	0/0:42,0:42:99:0,123,2884	0/0:23,0:23:63.20:0,63,1503	0/0:14,0:14:42.14:0,42,1002	0/0:31,0:31:90.29:0,90,2113	0/0:15,0:15:42.14:0,42,967	1/1:0,31:31:93.32:1720,93,0	0/0:15,0:15:45.15:0,45,1080	1/1:0,9:9:27.09:502,27,0
chr10	37493277	.	TCACACACACACACACACACACACACA	T	1346.03	PASS	AB=0.644;AC=5;AF=0.089;AN=56;BaseQRankSum=4.004;DP=555;FS=6.800;HRun=0;HaplotypeScore=295.3031;InbreedingCoeff=0.5835;MQ=58.86;MQ0=26;MQRankSum=-4.479;QD=21.71;ReadPosRankSum=-0.846;VQSLOD=1.3936;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:45.10:0,45,2663	0/0:6,0:6:9.03:0,9,509	0/0:24,0:12:6.02:0,6,98	0/0:30,0:11:12.04:0,12,184	0/0:16,0:16:30.10:0,30,2152	0/0:21,0:21:45.15:0,45,2245	0/0:36,0:35:39.13:0,39,2179	0/0:17,0:16:12.04:0,12,385	0/0:13,0:14:24.08:0,24,1932	0/0:20,0:20:27.09:0,27,1414	0/0:12,0:11:11.86:0,12,729	1/1:4,11:13:9.03:608,9,0	0/0:24,0:24:37.95:0,38,2532	0/0:17,0:18:27.09:0,27,1579	0/0:14,0:13:21.05:0,21,759	0/0:18,0:16:24.55:0,25,1247	0/0:18,0:24:33.07:0,33,1628	0/0:16,0:16:27.09:0,27,1207	0/0:11,0:11:3.01:0,3,274	0/0:16,0:15:21.07:0,21,1532	0/0:42,0:39:66:0,66,3167	0/0:22,0:22:21.53:0,22,925	1/1:7,11:18:9.03:461,9,0	0/1:13,16:28:99:393,0,141	0/0:15,0:15:21.06:0,21,1095	0/0:20,0:19:34.82:0,35,1539	0/0:12,0:11:16.87:0,17,1011	0/0:9,0:12:18.06:0,18,1466
chr10	37493316	.	CACACACACACATAT	C	5437.07	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=1.344;DP=589;FS=36.960;HRun=0;HaplotypeScore=190.5942;InbreedingCoeff=-0.5536;MQ=54.41;MQ0=23;MQRankSum=2.313;QD=12.44;ReadPosRankSum=0.801;VQSLOD=2.4930;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,12:35:23.99:0,24,244	0/1:6,0:6:5.64:161,0,6	0/0:17,0:13:37.01:0,37,699	0/0:27,0:16:24.16:0,24,765	0/1:16,0:15:99:166,0,471	0/1:21,0:21:35.77:356,0,36	0/1:32,0:30:51.60:52,0,122	0/1:22,0:20:33.55:598,0,34	0/1:15,0:13:17.52:18,0,613	0/1:18,0:17:99:562,0,123	0/1:17,0:16:28.80:29,0,36	0/1:18,0:16:99:170,0,168	0/0:28,0:28:8.89:0,9,377	0/1:30,0:30:72.62:114,0,73	1/1:12,0:11:6.02:131,6,0	0/1:15,0:13:99:290,0,106	0/1:29,0:28:99:199,0,500	0/1:20,0:19:24.57:468,0,25	0/1:8,0:8:39.11:195,0,39	0/1:22,0:22:99:399,0,140	0/1:47,0:41:99:667,0,336	0/1:12,0:12:19.06:19,0,43	0/1:12,0:12:67.19:88,0,67	0/1:23,0:23:39.81:120,0,40	0/1:21,0:21:59.09:572,0,59	0/0:31,0:30:81.25:0,81,1683	0/1:21,0:20:65.60:66,0,77	0/0:13,0:12:16.87:0,17,686
chr10	37493318	.	CACACACACATAT	C	6611.06	PASS	AB=0.975;AC=30;AF=0.536;AN=56;BaseQRankSum=-0.866;DP=590;FS=7.953;HRun=0;HaplotypeScore=176.8559;InbreedingCoeff=-0.2792;MQ=56.32;MQ0=23;MQRankSum=0.725;QD=13.20;ReadPosRankSum=0.228;VQSLOD=3.2608;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:36,0:35:0:0,0,0	1/1:6,0:6:13.86:225,14,0	0/0:20,0:16:44.83:0,45,845	0/0:27,0:17:27.17:0,27,836	0/1:16,0:15:99:211,0,371	1/1:22,0:22:30.09:478,30,0	0/1:17,15:30:26.75:102,0,27	1/1:23,0:21:43.47:698,43,0	0/1:15,0:13:20.54:21,0,431	0/1:17,1:17:41.64:656,0,42	1/1:17,0:16:3.01:35,3,0	0/1:19,0:17:99:125,0,215	0/1:26,0:26:38.65:39,0,73	0/1:29,1:30:27.37:257,0,27	1/1:3,9:11:6.02:219,6,0	0/1:16,0:14:49.03:361,0,49	0/1:29,0:28:99:197,0,394	0/1:19,1:19:16.46:529,0,16	0/1:9,0:9:22.68:246,0,23	0/1:22,0:22:14.89:418,0,15	0/1:47,0:41:99:812,0,103	0/1:11,0:11:36.19:45,0,36	0/1:12,0:12:59.85:60,0,68	0/1:23,0:23:39.67:93,0,40	1/1:20,0:20:42.08:665,42,0	0/0:30,0:29:76.97:0,77,1509	0/1:20,0:19:30.52:121,0,31	0/0:12,0:11:16.87:0,17,595
chr10	37493320	.	CACACACATAT	C	6929.57	PASS	AB=1.000;AC=37;AF=0.685;AN=54;BaseQRankSum=-1.657;DP=588;FS=0.489;HRun=0;HaplotypeScore=161.8952;InbreedingCoeff=0.1286;MQ=57.64;MQ0=23;MQRankSum=1.087;QD=14.97;ReadPosRankSum=0.139;VQSLOD=3.7201;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	1/1:6,0:6:15.05:250,15,0	0/0:23,0:19:53.86:0,54,1015	0/0:27,0:17:27.17:0,27,836	0/1:16,0:15:99:255,0,218	1/1:21,0:21:30.10:479,30,0	1/1:28,0:26:2.66:75,3,0	1/1:24,0:22:48.05:748,48,0	0/1:15,0:13:20.61:21,0,327	0/1:18,0:17:18.56:592,0,19	1/1:18,0:17:3.01:35,3,0	0/1:19,0:17:83.32:83,0,215	1/1:12,15:27:2.59:94,3,0	1/1:8,22:30:11.93:296,12,0	1/1:11,0:10:6.02:155,6,0	0/1:16,0:14:15.94:363,0,16	0/1:29,0:28:99:227,0,286	0/1:21,0:20:6.80:478,0,7	1/1:9,0:9:18.02:268,18,0	1/1:22,0:22:27.97:422,28,0	1/1:48,0:42:68.01:1011,68,0	1/1:4,6:10:2.67:95,3,0	0/1:12,0:12:32.65:33,0,68	0/1:23,0:23:39.35:65,0,39	1/1:20,0:20:42.09:665,42,0	0/0:31,0:30:78.51:0,79,1488	1/1:4,16:19:8.49:221,8,0	0/0:9,0:8:16.87:0,17,483
chr10	37493326	.	CATAT	C	7596.90	PASS	AB=1.000;AC=38;AF=0.704;AN=54;BaseQRankSum=-2.019;DP=510;FS=0.000;HRun=0;HaplotypeScore=107.7926;InbreedingCoeff=0.6668;MQ=64.77;MQ0=15;MQRankSum=1.565;QD=22.15;ReadPosRankSum=0.265;VQSLOD=4.5867;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	1/1:5,0:5:12.04:178,12,0	0/0:26,0:21:60.46:0,60,1100	0/0:31,0:21:38.70:0,39,978	1/1:14,0:14:31.03:383,31,0	1/1:13,0:13:33.11:531,33,0	1/1:18,0:16:2.79:35,3,0	1/1:6,18:22:55.07:846,55,0	0/1:15,0:14:18.10:199,0,18	1/1:16,0:16:20.69:663,21,0	1/1:1,11:12:2.22:34,2,0	0/0:18,0:17:20.94:0,21,257	1/1:19,0:19:3.74:37,4,0	1/1:26,0:26:12.18:121,12,0	1/1:10,0:9:6.02:71,6,0	1/1:15,0:13:18.26:469,18,0	0/1:29,0:29:6.74:495,0,7	1/1:17,0:16:26.59:486,27,0	1/1:11,0:11:25.79:383,26,0	1/1:15,0:15:33.08:515,33,0	1/1:42,0:37:60.57:1299,61,0	1/1:8,0:8:2.84:35,3,0	0/0:12,0:12:10.50:0,11,117	0/0:23,0:23:5.93:0,6,57	1/1:17,0:17:45.10:714,45,0	0/0:31,0:31:79.86:0,80,1393	1/1:17,0:17:10.13:103,10,0	0/0:8,0:8:16.86:0,17,227
chr10	37493820	.	AT	A	2533.49	PASS	AB=0.651;AC=31;AF=0.554;AN=56;BaseQRankSum=-1.929;DP=539;FS=1.012;HRun=16;HaplotypeScore=68.5298;InbreedingCoeff=-0.0316;MQ=71.19;MQ0=4;MQRankSum=2.561;QD=5.93;ReadPosRankSum=4.040;VQSLOD=2.7694;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:7,12:21:16.86:118,0,17	1/1:2,2:5:7.89:42,8,0	0/0:35,0:8:2.94:0,3,18	0/1:28,0:17:22.24:22,0,36	0/1:13,19:33:12.13:247,0,12	1/1:11,8:21:29.40:160,29,0	0/1:3,4:8:8.41:61,0,8	0/1:10,13:26:20:188,0,20	1/1:2,10:12:0.37:102,0,0	1/1:10,6:18:18.47:101,18,0	1/1:7,9:18:5.25:130,5,0	0/0:6,0:15:17.27:0,17,95	0/1:8,9:17:21.78:83,0,22	0/1:6,10:16:2.33:87,0,2	1/1:8,8:20:1.62:100,2,0	1/1:3,18:21:35.23:215,35,0	0/1:6,14:23:10.48:209,0,10	0/1:8,14:24:7.06:178,0,7	0/1:19,9:28:61.12:121,0,61	1/1:9,12:23:5.06:127,5,0	0/1:4,3:8:14.30:31,0,14	0/1:4,13:19:14.07:137,0,14	0/0:8,0:20:32.23:0,32,187	0/0:3,0:8:8.52:0,9,43	0/1:7,12:21:14.78:126,0,15	0/0:11,0:22:49.84:0,50,322	1/1:3,10:16:4.43:118,4,0	0/0:2,0:11:19.89:0,20,99
chr10	37494726	.	CTT	C	2865.60	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=10.303;DP=656;FS=0.000;HRun=2;HaplotypeScore=75.4078;InbreedingCoeff=0.9860;MQ=82.76;MQ0=0;MQRankSum=-0.398;QD=43.42;ReadPosRankSum=3.740;VQSLOD=3.6308;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,150,2921	0/0:4,0:4:12.04:0,12,244	0/0:27,0:27:81.28:0,81,1599	0/0:21,0:21:63.20:0,63,1098	0/0:27,0:27:78.25:0,78,1522	0/0:23,0:23:69.22:0,69,1353	0/0:21,0:21:60.19:0,60,1168	0/0:26,0:26:75.26:0,75,1524	0/0:32,0:32:96.32:0,96,1878	0/0:37,0:37:99:0,111,2132	0/0:16,0:16:45.13:0,45,811	1/1:0,27:27:72.24:1152,72,0	0/0:29,0:29:87.26:0,87,1628	0/0:19,0:19:57.17:0,57,1046	0/0:37,0:37:99:0,108,2152	0/0:23,0:23:69.21:0,69,1331	0/0:22,0:22:66.23:0,66,1339	0/0:24,0:24:72.23:0,72,1423	0/0:18,0:18:51.17:0,51,1003	0/0:21,0:21:63.20:0,63,1202	0/0:36,0:36:99:0,108,2068	0/0:7,0:7:18.06:0,18,365	1/1:0,10:10:30.10:487,30,0	1/1:0,29:29:84.29:1369,84,0	0/0:18,0:18:54.19:0,54,1075	0/0:11,0:11:33.10:0,33,617	0/0:28,0:28:84.27:0,84,1643	0/0:13,0:13:39.13:0,39,792
chr10	37497053	.	GAGTGTGAC	G	3414.29	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=10.473;DP=798;FS=2.673;HRun=0;HaplotypeScore=208.5448;InbreedingCoeff=0.9959;MQ=91.71;MQ0=0;MQRankSum=-9.287;QD=47.42;ReadPosRankSum=0.402;VQSLOD=3.2069;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,148,5864	0/0:12,0:12:33.11:0,33,1399	0/0:25,0:24:56.36:0,56,2078	0/0:49,0:48:81.35:0,81,3109	0/0:21,0:21:63.22:0,63,2631	0/0:19,0:19:54.19:0,54,2294	0/0:43,0:43:99:0,129,4833	0/0:31,0:31:81.71:0,82,2735	0/0:34,0:34:90.31:0,90,3695	0/0:31,0:31:90.21:0,90,3500	0/0:23,0:23:63.22:0,63,2581	1/1:2,29:31:72.25:1989,72,0	0/0:30,0:30:90.28:0,90,3470	0/0:35,0:35:99:0,105,4432	0/0:31,0:31:93.30:0,93,3730	0/0:24,0:24:72.25:0,72,3134	0/0:41,0:41:99:0,120,5200	0/0:30,0:30:81.28:0,81,3452	0/0:20,0:20:57.17:0,57,2121	0/0:28,0:28:75.26:0,75,3148	0/0:45,0:45:99:0,132,5679	0/0:21,0:21:63.22:0,63,2737	1/1:1,16:17:23.81:671,24,0	1/1:2,22:24:27.06:755,27,0	0/0:20,0:20:60.21:0,60,2545	0/0:30,0:29:84.29:0,84,3583	0/0:27,0:27:78.27:0,78,3337	0/0:6,0:6:18.06:0,18,791
chr10	37497728	.	CCCAACAGT	C	2125.35	PASS	AB=0.543;AC=3;AF=0.054;AN=56;BaseQRankSum=8.380;DP=739;FS=0.708;HRun=0;HaplotypeScore=181.2123;InbreedingCoeff=0.6406;MQ=71.90;MQ0=0;MQRankSum=-7.044;QD=66.42;ReadPosRankSum=0.365;VQSLOD=3.5186;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,141,5898	0/0:16,0:16:45.15:0,45,1995	0/0:31,0:30:84.25:0,84,3108	0/0:25,0:24:59.83:0,60,2324	0/0:20,0:20:57.20:0,57,2448	0/0:21,0:21:60.21:0,60,2586	0/0:30,0:30:90.27:0,90,3833	0/0:27,0:27:78.26:0,78,3125	0/0:25,0:25:75.26:0,75,3241	0/0:30,0:30:87.30:0,87,3828	0/0:12,0:12:36.12:0,36,1563	0/0:29,0:29:84.29:0,84,3723	0/0:32,0:32:93.32:0,93,4017	0/0:29,0:29:81.28:0,81,3509	0/0:45,0:45:99:0,129,5510	0/0:35,0:35:99:0,99,4165	0/0:34,0:34:99:0,99,4215	0/0:21,0:21:60.21:0,60,2474	0/0:17,0:17:45.15:0,45,1879	0/0:23,0:23:69.24:0,69,2919	0/0:45,0:45:99:0,132,5681	0/0:16,0:16:48.15:0,48,1997	0/0:20,0:20:57.20:0,57,2447	0/0:33,0:33:96.33:0,96,4188	0/0:21,0:21:63.22:0,63,2668	0/1:4,21:25:63.80:1720,0,64	0/0:22,0:22:60.21:0,60,2505	1/1:0,7:7:18.06:509,18,0
chr10	37498157	.	C	CATGA	6063.25	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-10.715;DP=771;FS=3.313;HRun=0;HaplotypeScore=121.9764;InbreedingCoeff=0.9991;MQ=74.97;MQ0=1;MQRankSum=-4.269;QD=63.16;ReadPosRankSum=3.432;VQSLOD=6.8696;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,123,2202	0/0:9,0:9:24.07:0,24,415	0/0:23,0:21:50.66:0,51,814	0/0:26,0:24:39.18:0,39,819	0/0:23,0:23:60.16:0,60,1016	0/0:26,0:26:75.21:0,75,1296	0/0:27,0:27:78.25:0,78,1418	0/0:43,0:43:99:0,114,2094	0/0:23,0:23:60.21:0,60,1120	0/0:34,0:34:96.31:0,96,1710	0/0:15,0:15:39.13:0,39,727	1/1:1,38:40:99:2715,102,0	0/0:24,0:24:72.21:0,72,1268	0/0:29,0:29:81.26:0,81,1474	0/0:37,0:37:99:0,105,1836	0/0:29,0:29:84.26:0,84,1498	0/0:39,0:39:99:0,114,2055	0/0:17,0:17:42.14:0,42,784	0/0:17,0:17:42.12:0,42,699	0/0:29,0:29:84.27:0,84,1525	0/0:44,0:44:99:0,126,2311	0/0:27,0:27:75.24:0,75,1349	1/1:1,28:30:72.25:1909,72,0	1/1:0,24:26:54.19:1440,54,0	0/0:25,0:25:69.22:0,69,1256	0/0:30,0:30:78.25:0,78,1386	0/0:22,0:22:57.19:0,57,1052	0/0:11,0:11:33.11:0,33,597
chr10	37499179	.	T	TG	4302.53	PASS	AB=0.973;AC=35;AF=0.625;AN=56;BaseQRankSum=-4.231;DP=634;FS=86.375;HRun=0;HaplotypeScore=121.9990;InbreedingCoeff=0.0389;MQ=44.33;MQ0=22;MQRankSum=6.202;QD=8.80;ReadPosRankSum=1.202;VQSLOD=1.6458;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:28,2:29:19.25:206,0,19	0/1:8,0:8:6.03:58,0,6	0/0:51,0:9:13.26:0,13,119	0/0:52,0:11:4.68:0,5,44	1/1:17,15:30:27.10:445,27,0	1/1:20,0:19:32.79:222,33,0	1/1:21,0:21:24.23:230,24,0	0/1:29,2:31:33.73:280,0,34	1/1:10,6:13:29.69:256,30,0	0/1:26,0:25:90.67:192,0,91	0/1:20,0:18:6.76:45,0,7	0/0:26,0:26:21.91:0,22,277	0/1:13,0:13:28.47:55,0,28	0/1:9,2:11:2.50:100,0,2	0/1:22,0:21:27.93:172,0,28	1/1:9,3:11:26.28:211,26,0	1/1:11,9:20:50.83:450,51,0	0/1:24,0:24:14.03:131,0,14	0/1:26,0:24:8:200,0,8	0/1:23,1:21:33.50:116,0,34	1/1:14,0:12:18.26:126,18,0	1/1:12,1:12:5.04:145,5,0	0/0:16,0:14:23.67:0,24,216	0/1:18,0:18:5.35:5,0,240	0/1:28,1:27:73.93:74,0,111	1/1:26,0:25:36.14:235,36,0	1/1:18,1:19:25.04:190,25,0	1/1:14,0:13:27.25:158,27,0
chr10	37499207	.	T	TC	8368.40	PASS	AC=42;AF=0.808;AN=52;BaseQRankSum=-2.897;DP=454;FS=0.581;HRun=1;HaplotypeScore=100.5136;InbreedingCoeff=0.9499;MQ=43.06;MQ0=7;MQRankSum=1.312;QD=23.38;ReadPosRankSum=-1.087;VQSLOD=4.4941;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,18:20:36.12:499,36,0	1/1:0,7:8:8.99:105,9,0	./.	./.	1/1:5,20:24:44.98:564,45,0	1/1:2,10:11:15.05:211,15,0	1/1:2,11:13:21.07:295,21,0	1/1:3,23:26:75.03:961,75,0	1/1:1,16:14:27.09:380,27,0	1/1:5,12:16:30.06:385,30,0	1/1:1,19:19:36.03:472,36,0	0/0:16,0:16:23.96:0,24,273	1/1:4,14:18:24.08:337,24,0	1/1:3,9:12:14.84:180,15,0	1/1:7,11:18:23.85:302,24,0	1/1:1,13:13:33.11:463,33,0	1/1:4,12:16:21.03:270,21,0	1/1:4,9:13:18.06:252,18,0	1/1:3,17:19:41.27:584,41,0	1/1:3,18:19:42.01:540,42,0	1/1:0,10:9:9.03:127,9,0	1/1:1,10:9:14.96:184,15,0	0/0:14,0:13:20.90:0,21,217	0/0:13,0:13:21.04:0,21,227	1/1:3,26:28:69.06:940,69,0	0/0:28,0:26:69.21:0,69,869	1/1:8,9:16:24.04:316,24,0	0/0:8,0:7:14.94:0,15,170
chr10	37500333	.	A	AT	8330.08	PASS	AB=0.670;AC=38;AF=0.679;AN=56;BaseQRankSum=-7.703;DP=553;FS=8.717;HRun=11;HaplotypeScore=60.7587;InbreedingCoeff=0.4635;MQ=71.42;MQ0=2;MQRankSum=-0.169;QD=18.76;ReadPosRankSum=0.884;VQSLOD=5.7853;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,27:31:45.74:631,46,0	1/1:3,8:14:29.56:256,30,0	0/1:16,0:12:15.38:15,0,49	0/0:16,0:14:9.12:0,9,120	1/1:12,24:37:74.07:707,74,0	1/1:6,14:20:45.55:451,46,0	1/1:6,7:13:4.33:194,4,0	1/1:6,31:37:63.91:820,64,0	1/1:3,16:19:18.81:363,19,0	1/1:6,24:30:78.13:782,78,0	1/1:7,7:15:2.85:176,3,0	0/0:17,0:17:50.81:0,51,394	1/1:2,14:16:36.06:360,36,0	1/1:2,7:9:22.29:216,22,0	1/1:0,16:17:41.92:410,42,0	1/1:2,15:17:42.08:426,42,0	1/1:4,21:25:54.11:548,54,0	1/1:5,12:18:21.65:376,22,0	0/1:7,4:11:8.20:107,0,8	0/1:4,17:23:12.93:398,0,13	0/1:2,6:8:28.44:104,0,28	1/1:0,12:12:24.52:245,25,0	0/0:30,1:31:41.28:0,41,501	0/0:10,0:10:26.85:0,27,204	0/1:8,18:27:17.27:359,0,17	0/0:30,0:31:58.76:0,59,447	0/1:8,20:29:13.10:384,0,13	0/0:3,0:3:8.97:0,9,70
chr10	37502016	.	GA	G	553.75	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=3.689;DP=573;FS=2.903;HRun=7;HaplotypeScore=71.0696;InbreedingCoeff=0.9842;MQ=74.70;MQ0=1;MQRankSum=0.502;QD=23.07;ReadPosRankSum=2.429;VQSLOD=3.9493;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:30:81.24:0,81,1003	0/0:7,0:7:21.05:0,21,251	0/0:21,0:17:39.08:0,39,451	0/0:19,0:14:17.49:0,17,195	0/0:23,0:23:61.73:0,62,746	0/0:24,0:24:54.16:0,54,666	0/0:18,0:18:45.13:0,45,552	0/0:32,0:32:78.24:0,78,969	0/0:16,0:16:39.12:0,39,490	0/0:27,0:27:57.05:0,57,713	0/0:14,0:14:39.12:0,39,489	0/0:23,0:23:63.19:0,63,779	0/0:12,0:12:33.11:0,33,415	0/0:22,0:22:50.73:0,51,610	0/0:19,0:19:57.18:0,57,717	0/0:15,0:15:42.13:0,42,528	0/0:34,0:34:75.22:0,75,919	0/0:27,0:27:72.15:0,72,870	0/0:25,0:25:63.20:0,63,792	0/0:13,0:13:39.12:0,39,490	0/0:26,0:25:63.18:0,63,767	0/0:19,0:19:50.66:0,51,618	0/0:14,0:14:27.54:0,28,324	0/0:18,0:18:36.59:0,37,450	0/0:28,0:28:72.22:0,72,894	1/1:2,17:19:51.11:519,51,0	0/0:22,0:22:58.07:0,58,715	1/1:0,5:5:15.03:153,15,0
chr10	37502031	.	CGT	C	1840.06	PASS	AB=0.836;AC=32;AF=0.640;AN=50;BaseQRankSum=3.966;DP=580;FS=0.784;HRun=0;HaplotypeScore=76.6609;InbreedingCoeff=0.1001;MQ=66.61;MQ0=13;MQRankSum=0.438;QD=4.32;ReadPosRankSum=1.643;VQSLOD=2.1893;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:24,10:34:20.89:208,21,0	1/1:4,2:6:6.02:64,6,0	./.	./.	0/0:23,0:23:21.07:0,21,304	1/1:14,10:24:12.50:130,13,0	1/1:14,6:20:21.05:227,21,0	./.	0/1:14,1:15:17.37:17,0,155	0/1:20,0:20:15.49:26,0,15	1/1:12,2:13:3.01:32,3,0	1/1:18,1:20:5.85:46,6,0	1/1:11,2:13:5.81:65,6,0	1/1:16,8:23:14.87:162,15,0	0/0:10,0:15:18.01:0,18,174	0/0:15,0:16:9.01:0,9,113	0/1:25,7:32:99:135,0,129	0/1:20,6:26:20.05:126,0,20	1/1:29,1:25:5.81:45,6,0	1/1:8,7:14:9.02:97,9,0	0/1:26,11:36:61.70:200,0,62	0/1:15,7:22:20.52:173,0,21	0/0:9,0:13:2.81:0,3,26	0/0:15,0:21:0:0,0,0	0/1:20,7:29:23.72:137,0,24	1/1:18,2:20:6.01:65,6,0	0/1:13,0:16:7.66:8,0,39	1/1:6,1:6:3.01:32,3,0
chr10	37505310	.	GTGGT	G	1263.09	PASS	AB=0.678;AC=7;AF=0.125;AN=56;BaseQRankSum=9.940;DP=496;FS=62.583;HRun=0;HaplotypeScore=92.4555;InbreedingCoeff=-0.1456;MQ=66.63;MQ0=1;MQRankSum=-9.055;QD=14.35;ReadPosRankSum=2.048;VQSLOD=0.9302;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:6,6:11:99:184,0,393	0/0:8,0:8:24.08:0,24,671	0/0:16,0:14:42.09:0,42,975	0/0:10,0:10:30.10:0,30,815	0/0:32,0:32:90.31:0,90,2555	0/1:5,11:16:99:327,0,298	0/1:6,2:7:64.32:64,0,406	0/0:27,0:27:78.24:0,78,2021	0/0:20,0:20:57.18:0,57,1564	0/1:10,13:22:99:451,0,751	0/1:8,4:11:60.11:60,0,490	0/0:14,0:14:42.05:0,42,1067	0/0:16,0:16:48.05:0,48,1195	0/0:16,0:16:45.15:0,45,1247	0/1:2,9:9:99:233,0,147	0/0:24,0:24:72.25:0,72,2002	0/0:26,0:26:75.26:0,75,2145	0/1:4,2:5:74.50:74,0,77	0/0:19,0:19:54.19:0,54,1541	0/0:16,0:16:48.16:0,48,1374	0/0:18,0:18:52.99:0,53,1411	0/0:21,0:21:60.21:0,60,1682	0/0:32,0:32:93.32:0,93,2587	0/0:27,0:28:75.23:0,75,2022	0/0:20,0:20:60.19:0,60,1615	0/0:19,0:19:57.18:0,57,1515	0/0:23,0:23:69.24:0,69,1879	0/0:3,0:3:9.03:0,9,206
chr10	37509164	.	TC	T	11995.30	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=14.930;DP=650;FS=0.287;HRun=2;HaplotypeScore=65.4867;InbreedingCoeff=0.9994;MQ=81.77;MQ0=0;MQRankSum=-2.794;QD=36.68;ReadPosRankSum=0.174;VQSLOD=5.1906;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:99:0,99,1443	1/1:0,7:7:21.07:267,21,0	0/0:16,0:16:48.12:0,48,655	0/0:18,0:18:47.88:0,48,660	1/1:0,29:29:87.28:1129,87,0	0/0:28,0:28:84.28:0,84,1257	0/0:21,0:21:63.21:0,63,944	1/1:0,42:42:99:1621,126,0	1/1:0,28:28:78.25:1013,78,0	0/0:21,0:21:63.21:0,63,944	0/0:20,0:20:57.17:0,57,816	0/0:23,0:23:66.21:0,66,969	1/1:0,18:18:51.17:662,51,0	1/1:0,31:31:81.26:1052,81,0	0/0:32,0:32:96.31:0,96,1420	1/1:0,23:23:63.20:817,63,0	1/1:0,20:20:57.19:740,57,0	0/0:25,0:25:75.23:0,75,1073	1/1:0,23:23:69.22:896,69,0	1/1:1,15:16:45.11:566,45,0	1/1:0,31:31:90.29:1169,90,0	1/1:0,13:13:36.12:466,36,0	0/0:18,0:18:54.17:0,54,789	0/0:28,0:28:84.24:0,84,1234	1/1:0,23:23:63.20:818,63,0	0/0:28,0:28:84.28:0,84,1259	1/1:0,23:23:60.19:779,60,0	0/0:12,0:12:36.12:0,36,539
chr10	37511257	.	T	TG	1563.62	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-7.410;DP=635;FS=8.556;HRun=1;HaplotypeScore=59.9644;InbreedingCoeff=0.9919;MQ=79.35;MQ0=0;MQRankSum=-3.068;QD=33.99;ReadPosRankSum=2.994;VQSLOD=3.0223;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,117,1504	0/0:13,0:13:39.13:0,39,506	0/0:12,0:13:21.72:0,22,282	0/0:16,0:16:33.19:0,33,476	0/0:34,0:34:99:0,102,1292	0/0:29,0:29:84.27:0,84,1091	0/0:33,0:33:99:0,99,1240	0/0:29,0:29:84.26:0,84,1077	0/0:15,0:15:45.15:0,45,581	0/0:29,0:29:84.27:0,84,1088	0/0:18,0:18:51.17:0,51,662	1/1:0,22:22:54.18:807,54,0	0/0:25,0:25:75.24:0,75,961	0/0:20,0:20:57.14:0,57,696	0/0:33,0:33:99:0,99,1243	0/0:32,0:32:90.29:0,90,1169	0/0:18,0:18:51.11:0,51,628	0/0:13,0:13:39.13:0,39,504	0/0:29,0:29:84.26:0,84,1066	0/0:29,0:29:84.27:0,84,1090	0/0:15,0:15:42.14:0,42,545	0/0:24,0:24:72.23:0,72,934	1/1:0,14:14:36.12:540,36,0	1/1:2,8:10:24.08:359,24,0	0/0:19,0:19:57.19:0,57,740	0/0:28,0:28:84.27:0,84,1091	0/0:21,0:21:63.17:0,63,788	0/0:12,0:12:14.80:0,15,192
chr10	37512174	.	C	CCAAAA	4413.97	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-7.273;DP=806;FS=0.000;HRun=0;HaplotypeScore=144.1736;InbreedingCoeff=0.9853;MQ=70.96;MQ0=3;MQRankSum=-3.277;QD=46.96;ReadPosRankSum=-0.231;VQSLOD=4.9563;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,117,1941	0/0:14,0:14:30.10:0,30,547	0/0:33,0:28:12.28:0,12,488	0/0:35,0:26:30.10:0,30,518	0/0:37,0:37:84.25:0,84,1436	0/0:7,0:7:21.07:0,21,383	0/0:18,0:18:27.09:0,27,495	0/0:33,0:33:48.15:0,48,804	0/0:33,0:33:72.17:0,72,1235	0/0:33,0:33:59.32:0,59,1086	0/0:18,0:18:30.09:0,30,496	1/1:15,28:44:78.26:2138,78,0	0/0:27,0:27:60.21:0,60,1109	0/0:32,0:32:81.28:0,81,1490	0/0:42,0:42:99:0,99,1772	0/0:40,0:40:81.28:0,81,1493	0/0:40,0:40:93.32:0,93,1687	0/0:19,0:19:39.13:0,39,702	0/0:21,0:20:30.03:0,30,386	0/0:33,0:33:63.19:0,63,1100	0/0:27,0:27:51.14:0,51,853	0/0:22,0:22:27.09:0,27,502	1/1:8,11:19:37.37:974,37,0	1/1:14,16:31:49.05:1302,49,0	0/0:25,0:25:57.15:0,57,939	0/0:34,0:35:72.23:0,72,1254	0/0:28,0:28:63.16:0,63,1048	0/0:7,0:7:21.07:0,21,364
chr10	37514005	.	AAAC	A	1017.74	PASS	AB=0.926;AC=13;AF=0.232;AN=56;BaseQRankSum=10.281;DP=596;FS=0.974;HRun=0;HaplotypeScore=96.1190;InbreedingCoeff=0.9030;MQ=84.40;MQ0=6;MQRankSum=0.598;QD=8.41;ReadPosRankSum=0.382;VQSLOD=3.0505;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,1:11:18.21:120,18,0	0/0:2,0:2:6.01:0,6,84	0/0:74,0:30:16.20:0,16,422	0/0:41,0:25:26.73:0,27,352	0/0:35,0:35:99:0,102,1660	1/1:22,2:22:34.88:271,35,0	1/1:13,0:13:11.09:55,11,0	0/0:31,0:31:87.20:0,87,1360	0/0:12,0:12:36.12:0,36,683	1/1:14,0:14:36.23:230,36,0	1/1:18,0:18:19.62:196,20,0	0/0:15,0:15:42.04:0,42,669	0/0:23,0:23:66.16:0,66,1190	0/0:18,0:18:51.10:0,51,797	0/1:23,2:25:1.66:141,0,2	0/0:26,0:26:72.09:0,72,1232	0/0:28,0:28:81.16:0,81,1397	1/1:15,1:16:31.54:191,32,0	0/0:9,0:9:24.06:0,24,429	0/0:26,0:26:73.70:0,74,1171	0/0:12,0:12:11.98:0,12,475	0/0:15,0:15:42.08:0,42,648	0/0:18,0:18:51.01:0,51,746	0/0:12,0:12:33.58:0,34,635	0/0:16,0:16:48.15:0,48,857	0/0:25,0:25:75.20:0,75,1251	0/0:30,0:30:87.13:0,87,1543	0/0:7,0:7:18.05:0,18,353
chr10	37514006	.	AAC	A	2232.38	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=8.793;DP=592;FS=0.916;HRun=0;HaplotypeScore=80.7895;InbreedingCoeff=0.9470;MQ=82.72;MQ0=6;MQRankSum=-1.794;QD=18.60;ReadPosRankSum=0.094;VQSLOD=3.3336;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,8:11:20.89:221,21,0	0/0:2,0:2:6.01:0,6,71	0/0:72,1:29:8.17:0,8,320	0/0:39,0:23:26.46:0,26,256	0/0:35,0:35:99:0,102,1336	1/1:3,21:22:38.94:465,39,0	1/1:1,11:12:12.04:161,12,0	0/0:30,0:30:86.86:0,87,1068	0/0:12,0:12:36.12:0,36,536	1/1:2,12:14:39.06:446,39,0	1/1:2,16:18:40.09:456,40,0	0/0:15,0:15:42.02:0,42,545	0/0:23,0:23:66.14:0,66,927	0/0:19,0:19:53.83:0,54,647	1/1:6,19:25:20.06:254,20,0	0/0:26,0:26:71.83:0,72,954	0/0:28,0:28:80.97:0,81,1102	1/1:2,14:16:33.09:424,33,0	0/0:8,0:8:24.08:0,24,331	0/0:26,0:26:60.27:0,60,913	0/0:12,0:12:9.25:0,9,388	0/0:14,0:14:41.47:0,41,485	0/0:19,0:19:53.27:0,53,635	0/0:12,0:12:15.21:0,15,479	0/0:17,0:17:50.88:0,51,685	0/0:26,0:26:78.17:0,78,1005	0/0:30,0:30:86.94:0,87,1224	0/0:6,0:6:18.06:0,18,279
chr10	37514007	.	AC	A	1553.08	PASS	AB=0.935;AC=15;AF=0.268;AN=56;BaseQRankSum=10.827;DP=588;FS=2.518;HRun=1;HaplotypeScore=72.5389;InbreedingCoeff=0.8780;MQ=81.63;MQ0=6;MQRankSum=1.376;QD=8.22;ReadPosRankSum=-0.136;VQSLOD=0.8921;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,1:10:20.85:169,21,0	0/0:2,0:2:6.01:0,6,60	0/1:67,5:29:52.80:53,0,210	0/0:37,0:21:24.99:0,25,179	0/0:35,0:35:99:0,100,1025	1/1:23,1:22:38.79:306,39,0	1/1:11,0:11:11.93:89,12,0	0/0:30,0:30:83.70:0,84,821	0/0:12,0:12:36.05:0,36,398	1/1:13,0:13:38.81:304,39,0	1/1:17,1:18:48.82:353,49,0	0/0:16,0:16:44.96:0,45,451	0/0:24,0:24:68.80:0,69,696	0/0:19,0:19:46.07:0,46,465	1/1:24,1:25:29.48:237,29,0	0/0:26,0:26:72.65:0,73,725	0/0:28,0:28:78.85:0,79,841	1/1:16,0:16:32.78:241,33,0	0/0:8,0:8:23.88:0,24,240	0/0:25,0:25:40.10:0,40,699	0/0:12,0:12:15.45:0,15,316	0/0:14,0:14:33.21:0,33,338	0/0:20,0:20:49.15:0,49,532	0/0:12,0:12:15.12:0,15,355	0/0:17,0:17:42.74:0,43,493	0/0:26,0:26:77.87:0,78,769	0/0:30,0:30:80.24:0,80,918	0/0:6,0:6:18.05:0,18,213
chr10	37517365	.	T	TAA	2682.15	PASS	AB=0.885;AC=16;AF=0.286;AN=56;BaseQRankSum=-2.086;DP=494;FS=3.276;HRun=12;HaplotypeScore=68.0434;InbreedingCoeff=0.7754;MQ=68.72;MQ0=12;MQRankSum=0.464;QD=16.35;ReadPosRankSum=-0.545;VQSLOD=2.5554;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,10:16:39.08:498,39,0	0/0:6,0:7:17.55:0,18,136	0/0:49,0:12:6.10:0,6,29	0/1:49,0:19:6.47:6,0,53	0/0:19,0:21:2.39:0,2,324	1/1:4,11:16:37.98:480,38,0	1/1:2,3:5:11.99:146,12,0	0/0:23,0:24:50.35:0,50,489	0/0:8,0:8:18.01:0,18,167	1/1:2,11:14:33.09:413,33,0	1/1:4,13:18:42.08:547,42,0	0/0:11,0:13:26.60:0,27,280	0/0:8,0:8:14.73:0,15,123	0/0:10,0:10:27.02:0,27,250	1/1:2,7:10:11.53:135,12,0	0/0:8,0:8:21.01:0,21,193	0/0:25,0:26:66.98:0,67,580	1/1:9,10:19:48.14:641,48,0	0/1:11,0:15:11.75:12,0,210	0/0:22,0:28:34.98:0,35,489	0/0:7,0:8:20.76:0,21,178	0/0:7,0:8:20.76:0,21,178	0/0:21,0:22:62.72:0,63,554	0/0:4,0:4:12.01:0,12,111	0/0:27,0:29:62.46:0,62,640	0/0:20,0:22:47.59:0,48,470	0/0:18,0:20:41:0,41,394	0/0:11,0:12:23.57:0,24,239
chr10	37517618	.	G	GA	4765.71	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-13.316;DP=592;FS=0.353;HRun=8;HaplotypeScore=51.6989;InbreedingCoeff=0.9803;MQ=72.32;MQ0=0;MQRankSum=-1.607;QD=30.16;ReadPosRankSum=0.613;VQSLOD=4.5347;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,29:30:90.10:1019,90,0	0/0:10,0:10:30.02:0,30,275	0/0:14,0:14:29.99:0,30,267	0/0:4,0:5:6:0,6,55	0/0:22,0:22:60.02:0,60,549	1/1:0,21:21:63.19:727,63,0	1/1:3,26:29:75.22:863,75,0	0/0:34,1:35:49.38:0,49,696	0/0:19,0:19:48.02:0,48,439	1/1:3,18:21:29.66:579,30,0	1/1:4,14:18:39.07:435,39,0	0/0:23,0:23:69.04:0,69,632	0/0:20,0:20:60.03:0,60,549	0/0:16,0:16:39.02:0,39,357	1/1:2,26:28:75.22:866,75,0	0/0:29,0:29:84.05:0,84,769	0/0:21,0:20:57.02:0,57,522	1/1:2,9:11:24.07:277,24,0	0/0:19,0:19:47.96:0,48,427	0/0:22,0:22:60.01:0,60,544	0/0:20,0:20:54.03:0,54,494	0/0:17,0:17:39.02:0,39,357	0/0:27,1:28:49.43:0,49,707	0/0:24,0:24:60.03:0,60,549	0/0:29,0:29:81.04:0,81,741	0/0:23,1:24:31.41:0,31,539	0/0:25,0:24:63.03:0,63,576	0/0:12,0:12:36.02:0,36,330
chr10	37517921	.	AATAGGGGACTTAAGAC	A	12695.69	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=14.807;DP=689;FS=3.075;HRun=0;HaplotypeScore=297.3187;InbreedingCoeff=0.9565;MQ=82.67;MQ0=0;MQRankSum=-14.938;QD=90.04;ReadPosRankSum=3.588;VQSLOD=4.1652;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,19:25:38.81:1845,39,0	0/0:17,0:17:51.18:0,51,3680	0/0:24,0:24:72.25:0,72,4070	0/0:19,0:19:54.19:0,54,2687	0/0:31,0:31:90.29:0,90,6295	1/1:3,16:19:27.09:1278,27,0	1/1:4,12:16:27.09:1278,27,0	0/0:46,0:46:99:0,135,9147	0/0:24,0:24:69.24:0,69,5079	1/1:5,25:30:75.26:3449,75,0	1/1:4,13:17:30.06:1297,30,0	0/0:32,0:32:87.28:0,87,5875	0/0:27,0:27:78.27:0,78,5456	0/0:26,0:26:78.27:0,78,6015	1/1:3,27:30:72.25:3408,72,0	0/0:42,0:42:99:0,123,8799	0/0:10,0:10:27.09:0,27,2084	1/1:1,3:4:3.01:142,3,0	0/0:24,0:24:72.25:0,72,4655	0/0:33,0:33:93.32:0,93,6785	0/0:36,0:36:99:0,102,6874	0/0:29,0:29:87.30:0,87,6735	0/0:33,0:33:93.30:0,93,6690	0/0:18,0:18:54.19:0,54,3818	0/0:21,0:21:60.17:0,60,4106	0/0:30,0:30:90.31:0,90,6469	0/0:23,0:23:69.24:0,69,4813	0/0:3,0:3:9.03:0,9,714
chr10	37517987	.	TA	T	1425.57	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=7.049;DP=635;FS=0.000;HRun=10;HaplotypeScore=86.8196;InbreedingCoeff=0.9812;MQ=72.83;MQ0=1;MQRankSum=1.197;QD=18.51;ReadPosRankSum=3.754;VQSLOD=4.1393;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:60.08:0,60,637	0/0:9,0:9:21.05:0,21,225	0/0:15,0:15:27.03:0,27,278	0/0:10,0:9:12.03:0,12,130	0/0:29,0:29:87.18:0,87,927	0/0:26,0:26:59.93:0,60,614	0/0:10,0:10:27.06:0,27,288	0/0:42,0:41:99:0,105,1147	0/0:24,0:24:58.30:0,58,684	0/0:27,1:28:52.06:0,52,762	0/0:21,0:21:61.72:0,62,600	1/1:2,29:31:80.98:703,81,0	0/0:20,0:20:45.05:0,45,468	0/0:15,0:16:47.86:0,48,469	0/0:31,0:31:72.02:0,72,752	0/0:37,0:37:99:0,99,1070	0/0:16,0:16:42.09:0,42,451	0/0:9,0:9:14.99:0,15,144	0/0:24,0:24:62.90:0,63,645	0/0:29,0:29:81.21:0,81,888	0/0:19,0:19:51.11:0,51,546	0/0:28,0:28:78.02:0,78,827	1/1:2,25:28:61.87:527,62,0	1/1:1,17:18:38.99:339,39,0	0/0:28,0:28:56.39:0,56,702	0/0:22,0:22:57.15:0,57,631	0/0:27,0:27:81.18:0,81,876	0/0:13,0:13:33.09:0,33,365
chr10	37518706	.	AAAG	A	6071.38	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=12.739;DP=644;FS=3.158;HRun=0;HaplotypeScore=94.3911;InbreedingCoeff=0.9984;MQ=80.49;MQ0=0;MQRankSum=-3.856;QD=41.02;ReadPosRankSum=2.506;VQSLOD=5.9817;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,27:29:75.25:1203,75,0	0/0:10,0:10:27.09:0,27,578	0/0:21,0:21:45.15:0,45,896	0/0:22,0:20:19.98:0,20,592	0/0:28,0:28:75.22:0,75,1536	1/1:0,21:21:57.19:916,57,0	1/1:0,14:14:36.08:549,36,0	0/0:37,0:36:99:0,99,2103	0/0:22,0:22:66.23:0,66,1399	1/1:1,26:27:78.26:1231,78,0	1/1:1,15:16:45.02:638,45,0	0/0:25,0:25:69.24:0,69,1441	0/0:28,0:28:78.23:0,78,1618	0/0:29,0:29:84.29:0,84,1767	1/1:4,25:29:66.19:1033,66,0	0/0:32,0:32:81.28:0,81,1740	0/0:24,0:24:63.22:0,63,1299	1/1:1,11:12:33.07:502,33,0	0/0:23,0:23:57.20:0,57,1221	0/0:25,0:25:75.26:0,75,1615	0/0:22,0:22:66.21:0,66,1413	0/0:18,0:18:51.18:0,51,1126	0/0:22,0:22:63.22:0,63,1370	0/0:15,0:15:39.13:0,39,861	0/0:20,0:20:60.21:0,60,1285	0/0:34,0:34:96.33:0,96,2084	0/0:31,0:30:90.26:0,90,1794	0/0:8,0:8:24.08:0,24,530
chr10	37522531	.	T	TAAAA	8901.16	PASS	AB=0.854;AC=52;AF=0.929;AN=56;BaseQRankSum=-0.122;DP=670;FS=1.181;HRun=18;HaplotypeScore=181.8964;InbreedingCoeff=0.2061;MQ=67.01;MQ0=3;MQRankSum=-2.997;QD=13.65;ReadPosRankSum=-2.774;VQSLOD=0.8564;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:19:32.77:374,33,0	0/1:10,4:17:15.37:112,0,15	0/1:24,0:15:12.03:12,0,66	0/0:18,0:14:1.06:0,1,77	1/1:13,14:33:52.14:424,52,0	1/1:26,0:27:53.99:690,54,0	1/1:20,0:19:25.47:251,25,0	1/1:26,0:35:49.07:531,49,0	1/1:13,0:13:28.86:336,29,0	1/1:28,1:30:65.68:783,66,0	1/1:19,1:20:35.86:460,36,0	1/1:25,0:22:38.92:537,39,0	1/1:7,0:24:1.93:66,2,0	1/1:20,0:21:35.06:288,35,0	1/1:34,0:35:42.25:585,42,0	1/1:37,0:36:60.90:518,61,0	1/1:20,0:22:21.91:288,22,0	1/1:11,0:12:18.69:164,19,0	1/1:19,0:24:24.46:268,24,0	1/1:10,0:33:62.41:596,62,0	1/1:8,0:7:6.02:78,6,0	1/1:11,0:20:21.80:175,22,0	1/1:18,0:18:28.50:366,28,0	1/1:11,0:11:4.73:59,5,0	1/1:16,0:27:14.33:103,14,0	1/1:38,0:38:58.98:555,59,0	1/1:14,0:33:15.17:128,15,0	1/1:19,0:20:13.89:156,14,0
chr10	37522553	.	T	TG	7251.54	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-7.306;DP=500;FS=6.887;HRun=0;HaplotypeScore=71.6345;InbreedingCoeff=0.9749;MQ=70.98;MQ0=2;MQRankSum=-4.622;QD=37.38;ReadPosRankSum=4.186;VQSLOD=4.8569;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,17:17:42.14:671,42,0	0/0:8,0:8:24.05:0,24,297	0/0:21,0:13:39.13:0,39,541	0/0:20,0:16:39.56:0,40,507	0/0:21,0:21:42.14:0,42,585	1/1:0,16:16:48.16:767,48,0	1/1:0,9:9:27.09:431,27,0	0/0:25,0:26:60.20:0,60,836	0/0:11,0:11:30.10:0,30,419	1/1:2,26:31:81.26:1259,81,0	1/1:3,8:11:18.06:287,18,0	1/1:5,9:13:33.11:518,33,0	0/0:19,0:19:33.11:0,33,460	0/0:12,0:12:24.08:0,24,334	1/1:2,22:24:51.17:808,51,0	0/0:27,0:25:69.19:0,69,937	0/0:21,0:20:45.15:0,45,618	1/1:1,5:6:9.03:144,9,0	0/0:19,0:19:48.16:0,48,656	0/0:34,0:33:90.30:0,90,1255	0/0:6,0:5:12:0,12,146	0/0:13,0:13:36.11:0,36,486	1/1:4,19:23:42.14:670,42,0	1/1:1,10:11:23.98:381,24,0	0/0:17,0:16:15.05:0,15,209	1/1:1,26:28:75.23:1172,75,0	0/0:31,0:29:36.09:0,36,488	1/1:1,3:4:9.03:144,9,0
chr10	37523527	.	TGG	T	885.26	PASS	AB=0.766;AC=13;AF=0.241;AN=54;BaseQRankSum=0.909;DP=318;FS=14.425;HRun=12;HaplotypeScore=43.0903;InbreedingCoeff=0.4617;MQ=75.35;MQ0=2;MQRankSum=0.726;QD=8.59;ReadPosRankSum=6.630;VQSLOD=-0.3193;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:11.97:0,12,132	0/0:0,0:1:2.50:0,2,9	0/0:20,0:13:12.01:0,12,154	0/0:10,0:8:8.80:0,9,59	0/0:3,0:3:6.01:0,6,69	0/0:14,0:15:15.19:0,15,199	0/0:27,0:27:54.03:0,54,672	1/1:6,0:7:2.72:12,3,0	0/0:14,0:15:27.54:0,28,362	0/0:6,0:6:9:0,9,95	./.	1/1:4,14:18:11.23:310,11,0	0/1:14,0:14:4.65:5,0,113	0/0:15,0:20:10.78:0,11,135	0/0:14,0:14:18.06:0,18,261	0/0:7,0:7:11.53:0,12,143	0/0:9,0:9:13.86:0,14,182	0/0:10,0:11:8.69:0,9,80	0/1:2,0:6:16.42:16,0,29	0/0:0,0:1:1.25:0,1,3	0/1:13,1:23:6.58:50,0,7	0/0:2,0:5:2.68:0,3,11	1/1:1,3:4:9.02:92,9,0	1/1:9,21:30:52.62:522,53,0	0/0:8,1:9:3.87:0,4,13	0/0:8,0:16:14.46:0,14,69	0/0:4,0:6:2.50:0,2,9	1/1:0,1:1:3.01:31,3,0
chr10	37524996	.	C	CTCTCTG	10941.44	PASS	AB=0.630;AC=21;AF=0.375;AN=56;BaseQRankSum=-10.466;DP=628;FS=6.007;HRun=0;HaplotypeScore=148.1636;InbreedingCoeff=0.9335;MQ=64.09;MQ0=7;MQRankSum=-10.496;QD=50.19;ReadPosRankSum=-2.812;VQSLOD=3.9193;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:47:93.09:0,93,901	1/1:1,10:13:21.07:688,21,0	0/0:26,0:11:21.83:0,22,345	0/0:30,0:19:32.09:0,32,565	0/0:15,0:15:42.11:0,42,798	0/0:13,0:21:38.39:0,38,405	0/0:13,0:38:70.42:0,70,635	1/1:3,14:34:96.12:2276,96,0	0/0:12,0:12:36.12:0,36,777	0/1:7,0:17:5.46:5,0,315	0/0:6,0:18:39.39:0,39,319	0/0:10,0:24:43.68:0,44,357	1/1:1,14:18:30.57:1081,31,0	1/1:2,13:19:27.09:983,27,0	0/0:11,0:30:18.92:0,19,383	0/0:14,0:14:36.12:0,36,807	0/0:23,0:23:63.22:0,63,1492	0/0:5,0:19:37.48:0,37,240	1/1:1,15:18:51.17:1186,51,0	1/1:2,12:17:18.06:612,18,0	1/1:3,12:18:14.62:545,15,0	1/1:2,14:20:35.97:1176,36,0	0/0:7,0:13:27.55:0,28,341	0/0:8,0:40:49.63:0,50,525	1/1:0,12:17:24.08:860,24,0	0/0:26,0:26:75.24:0,75,1505	1/1:1,20:27:42.28:1528,42,0	0/0:11,0:11:24.08:0,24,537
chr10	37525043	.	T	TCA	2813.34	PASS	AB=0.890;AC=48;AF=0.857;AN=56;BaseQRankSum=-0.475;DP=500;FS=1.292;HRun=0;HaplotypeScore=143.6811;InbreedingCoeff=0.1092;MQ=57.58;MQ0=6;MQRankSum=-3.116;QD=5.71;ReadPosRankSum=-2.482;VQSLOD=2.9854;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:31,2:33:15.05:215,15,0	1/1:12,0:12:8.97:72,9,0	1/1:27,0:13:0.47:1,0,0	0/1:22,0:15:0:0,0,0	1/1:10,3:13:6.02:89,6,0	1/1:11,2:13:14.98:178,15,0	1/1:30,2:32:12.04:177,12,0	1/1:19,0:19:17.87:132,18,0	1/1:10,5:16:18.06:267,18,0	1/1:10,0:10:9.02:104,9,0	1/1:7,0:8:9.02:109,9,0	1/1:19,0:19:12:128,12,0	1/1:15,0:15:5.97:50,6,0	1/1:19,0:19:8.45:75,8,0	0/1:14,2:16:23.95:118,0,24	1/1:8,8:17:9:115,9,0	0/1:20,6:29:66.11:232,0,66	0/1:16,2:20:28.59:139,0,29	1/1:14,0:14:8.97:70,9,0	1/1:10,0:10:5.57:48,6,0	1/1:20,0:20:11.89:102,12,0	1/1:15,0:15:5.96:46,6,0	0/0:7,0:6:0:0,0,0	1/1:28,0:28:11.37:122,11,0	0/1:17,0:17:0:0,0,0	1/1:19,0:19:12.03:151,12,0	1/1:21,0:21:14.97:128,15,0	0/1:6,1:8:52.39:59,0,52
chr10	37526456	.	TG	T	4243.29	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-3.210;DP=346;FS=2.511;HRun=2;HaplotypeScore=48.7072;InbreedingCoeff=0.6953;MQ=70.99;MQ0=9;MQRankSum=-3.695;QD=13.96;ReadPosRankSum=1.856;VQSLOD=4.2310;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:14,1:16:11.76:101,12,0	1/1:1,0:1:0.47:1,0,0	0/0:25,0:10:10.80:0,11,101	0/0:17,0:8:13.25:0,13,136	1/1:4,7:12:12.28:83,12,0	1/1:9,0:8:9.02:89,9,0	1/1:12,0:12:14.92:123,15,0	1/1:20,1:20:40.24:301,40,0	1/1:9,0:9:10.84:101,11,0	1/1:17,1:19:35.93:325,36,0	1/1:15,0:15:29.77:230,30,0	1/1:11,0:10:15.01:139,15,0	1/1:1,0:1:3:25,3,0	1/1:11,0:11:26.95:194,27,0	1/1:11,0:11:9.01:86,9,0	1/1:8,0:7:13.37:113,13,0	1/1:15,0:12:13.41:87,13,0	1/1:10,0:10:26.90:220,27,0	1/1:9,14:22:60.31:403,60,0	1/1:17,1:18:33.94:219,34,0	1/1:8,0:8:11.92:89,12,0	1/1:4,0:4:9.21:65,9,0	1/1:4,6:10:20.91:185,21,0	1/1:16,0:15:35.91:306,36,0	1/1:8,0:8:14.68:118,15,0	1/1:10,2:13:38.89:340,39,0	1/1:11,0:11:24.18:158,24,0	1/1:7,1:8:14.98:142,15,0
chr10	37526457	.	GGTT	G	3630.34	PASS	AB=0.985;AC=37;AF=0.661;AN=56;BaseQRankSum=-5.384;DP=349;FS=7.810;HRun=0;HaplotypeScore=57.6172;InbreedingCoeff=-0.1346;MQ=68.92;MQ0=11;MQRankSum=2.761;QD=11.83;ReadPosRankSum=3.506;VQSLOD=1.7356;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,13:16:11.61:164,12,0	0/0:1,0:1:2.94:0,3,18	0/0:24,0:9:11.91:0,12,113	0/0:17,0:8:5.81:0,6,198	0/1:12,0:12:52.42:59,0,52	1/1:0,8:8:9.03:143,9,0	1/1:1,2:11:14.95:153,15,0	0/1:15,0:20:69.92:204,0,70	0/1:9,0:9:75.70:78,0,76	1/1:4,14:18:33.28:437,33,0	1/1:3,11:15:29.61:261,30,0	1/1:1,2:7:14.99:175,15,0	0/1:2,0:2:12.21:19,0,12	0/1:9,0:11:82.05:94,0,82	1/1:0,10:11:9:120,9,0	0/1:7,0:7:38.97:100,0,39	0/1:14,0:12:29.07:60,0,29	1/1:5,2:10:21.78:247,22,0	0/1:22,0:23:99:191,0,111	0/1:19,0:20:78.41:78,0,170	0/1:8,0:8:39.44:50,0,39	0/1:4,0:6:33.56:34,0,63	1/1:7,2:11:3.53:176,4,0	1/1:8,2:15:32.98:274,33,0	0/1:8,0:8:38.85:65,0,39	1/1:6,7:14:18.99:266,19,0	0/1:10,0:11:82.41:108,0,82	1/1:4,0:6:11.98:73,12,0
chr10	37526570	.	CT	C	1406.83	PASS	AB=0.899;AC=22;AF=0.393;AN=56;BaseQRankSum=0.691;DP=316;FS=4.065;HRun=9;HaplotypeScore=46.8657;InbreedingCoeff=0.6714;MQ=70.00;MQ0=19;MQRankSum=0.658;QD=8.90;ReadPosRankSum=1.742;VQSLOD=1.2874;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:16,0:13:3.70:26,0,4	0/0:2,0:2:6.02:0,6,68	0/0:17,0:9:23.75:0,24,187	0/0:19,0:10:14.46:0,14,75	1/1:14,3:17:29.81:236,30,0	1/1:10,0:8:4.08:52,4,0	1/1:9,0:7:4.84:48,5,0	0/0:12,0:11:5.88:0,6,247	1/1:8,3:10:17.84:144,18,0	1/1:1,10:11:17.94:147,18,0	1/1:3,6:9:18:164,18,0	0/0:7,0:7:14.84:0,15,104	0/0:7,0:6:15.03:0,15,161	0/0:9,0:8:11.24:0,11,144	0/1:6,3:8:0.73:66,0,1	0/1:4,0:3:6.29:14,0,6	1/1:16,14:27:41.86:364,42,0	0/1:9,2:11:2.82:94,0,3	0/0:17,0:16:41.84:0,42,371	0/0:10,0:9:14.98:0,15,139	0/0:6,0:6:8.99:0,9,80	0/0:8,0:7:8.98:0,9,101	0/0:6,0:6:8.45:0,8,52	0/0:5,0:5:11.89:0,12,83	0/0:14,0:14:27.88:0,28,248	1/1:3,11:13:23.85:192,24,0	0/0:18,0:18:37.47:0,37,367	1/1:2,5:7:6:55,6,0
chr10	37528734	.	CT	C	284.10	PASS	AB=0.802;AC=7;AF=0.125;AN=56;BaseQRankSum=4.122;DP=470;FS=6.178;HRun=14;HaplotypeScore=57.3772;InbreedingCoeff=0.2937;MQ=74.90;MQ0=2;MQRankSum=-0.791;QD=3.23;ReadPosRankSum=-0.028;VQSLOD=-0.3821;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:8:15.33:0,15,127	0/0:6,0:6:12:0,12,108	0/1:22,0:14:1.24:1,0,96	0/0:12,0:7:3.47:0,3,26	0/0:25,3:28:12.68:0,13,385	0/0:15,1:18:18.51:0,19,301	0/1:8,0:11:3.57:4,0,126	0/0:21,3:25:27.24:0,27,368	0/0:17,0:17:36.03:0,36,330	0/0:18,2:21:12.84:0,13,379	0/0:17,0:18:32.87:0,33,293	0/0:19,0:19:27.39:0,27,377	0/0:19,0:20:47.79:0,48,414	0/0:11,1:13:6.26:0,6,181	0/1:11,3:14:17.15:17,0,139	0/0:18,0:18:38.92:0,39,343	0/0:15,0:17:24.96:0,25,351	0/0:16,0:16:30.03:0,30,279	0/0:12,0:15:26.02:0,26,253	0/0:26,0:26:48.01:0,48,431	0/1:7,5:12:72.88:73,0,109	0/0:16,0:16:39.03:0,39,358	0/0:11,0:13:23.84:0,24,201	0/0:9,0:9:18.02:0,18,167	0/0:15,0:18:41.55:0,42,346	0/1:6,8:14:1.10:137,0,1	0/0:28,0:29:59.12:0,59,563	1/1:3,10:15:27.85:176,28,0
chr10	37528869	.	CT	C	750.05	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.757;DP=552;FS=6.835;HRun=9;HaplotypeScore=50.5794;InbreedingCoeff=0.9770;MQ=72.81;MQ0=0;MQRankSum=-0.744;QD=20.27;ReadPosRankSum=-0.096;VQSLOD=3.8396;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:45.12:0,45,509	0/0:9,0:9:27.07:0,27,303	0/0:13,0:13:23.08:0,23,255	0/0:5,0:5:12.03:0,12,130	0/0:18,0:18:51.14:0,51,579	0/0:28,0:28:75.22:0,75,866	0/0:14,0:14:39.12:0,39,450	0/0:24,1:25:38.69:0,39,686	0/0:26,0:26:72.18:0,72,810	0/0:37,0:37:93.24:0,93,1037	0/0:12,0:12:27.08:0,27,311	0/0:22,0:22:48.13:0,48,544	0/0:23,0:23:63.19:0,63,727	0/0:18,0:18:51.14:0,51,575	0/0:28,0:28:75.21:0,75,857	0/0:24,0:24:66.20:0,66,762	0/0:25,2:27:20.28:0,20,730	0/0:16,0:16:42.08:0,42,467	0/0:9,0:9:21.06:0,21,242	0/0:25,0:25:72.20:0,72,822	0/0:16,0:16:33.10:0,33,381	0/0:23,0:23:60.12:0,60,668	0/0:13,0:13:36.11:0,36,415	0/0:21,0:21:57.10:0,57,624	0/0:16,0:16:39.12:0,39,450	1/1:4,21:25:31.41:542,31,0	0/0:30,0:30:84.22:0,84,943	1/1:0,12:12:36.02:329,36,0
chr10	37530605	.	GGT	G	2613.27	PASS	AB=0.989;AC=32;AF=0.571;AN=56;BaseQRankSum=9.601;DP=607;FS=0.409;HRun=0;HaplotypeScore=154.9557;InbreedingCoeff=-0.3951;MQ=77.12;MQ0=2;MQRankSum=-3.155;QD=4.56;ReadPosRankSum=11.659;VQSLOD=0.4441;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:21,0:21:45.04:76,0,45	0/1:9,0:9:1.78:65,0,2	0/0:17,0:16:16.98:0,17,277	0/0:17,0:16:3.80:0,4,263	1/1:20,1:21:24.98:171,25,0	0/1:21,0:21:17.12:105,0,17	0/1:14,0:14:46.75:47,0,60	0/1:33,1:34:64.51:65,0,86	0/1:15,1:16:30.38:60,0,30	0/1:25,0:25:14:67,0,14	0/1:16,0:16:13.11:56,0,13	0/1:24,0:24:12.92:161,0,13	1/1:15,0:15:8.78:88,9,0	0/1:18,1:19:5.23:99,0,5	0/1:23,2:25:15.69:204,0,16	0/1:21,0:21:1.74:95,0,2	1/1:31,0:31:32.27:216,32,0	0/1:24,0:24:10.08:95,0,10	0/1:24,0:24:70.42:70,0,76	0/1:23,0:23:54.50:88,0,54	1/1:30,0:30:40.77:191,41,0	1/1:32,0:32:29.86:198,30,0	1/1:22,0:22:26.32:139,26,0	0/1:19,0:18:54.47:54,0,68	0/1:11,0:11:25.38:35,0,25	0/1:26,0:26:4.30:112,0,4	0/1:30,0:28:5.35:140,0,5	0/1:20,0:20:33.45:77,0,33
chr10	37530607	.	TGG	T	14379.76	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-2.573;DP=603;FS=15.182;HRun=11;HaplotypeScore=116.8279;InbreedingCoeff=0.8767;MQ=79.27;MQ0=2;MQRankSum=-5.435;QD=25.41;ReadPosRankSum=7.152;VQSLOD=2.9046;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,12:20:36.97:385,37,0	1/1:2,7:9:23.89:237,24,0	0/0:19,0:19:1.71:0,2,320	0/0:17,0:16:27.84:0,28,310	1/1:2,18:20:57.14:605,57,0	1/1:3,17:21:50.86:523,51,0	1/1:4,10:14:30.06:319,30,0	1/1:7,26:34:65.86:685,66,0	1/1:4,13:17:35.85:383,36,0	1/1:2,23:25:69.13:723,69,0	1/1:4,11:16:32.82:331,33,0	1/1:2,21:23:63.14:670,63,0	1/1:1,14:15:36.09:383,36,0	1/1:3,16:19:45.04:479,45,0	1/1:5,19:24:57.10:596,57,0	1/1:2,19:21:48.12:511,48,0	1/1:2,29:31:87.21:926,87,0	1/1:3,20:23:60.15:639,60,0	1/1:5,18:23:54.08:568,54,0	1/1:5,19:24:48.08:511,48,0	1/1:2,29:31:78.16:830,78,0	1/1:2,30:32:90.22:958,90,0	1/1:2,20:22:51.97:570,52,0	1/1:4,12:17:38.56:375,39,0	1/1:2,8:10:24.06:255,24,0	1/1:1,23:25:71.91:746,72,0	1/1:3,27:29:75.17:798,75,0	1/1:4,14:19:28.92:373,29,0
chr10	37530802	.	CTTTTTTTTT	C	5748.41	PASS	AB=0.897;AC=15;AF=0.268;AN=56;BaseQRankSum=8.731;DP=599;FS=5.864;HRun=17;HaplotypeScore=160.6578;InbreedingCoeff=0.8755;MQ=53.64;MQ0=17;MQRankSum=-6.838;QD=30.58;ReadPosRankSum=8.528;VQSLOD=0.2437;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,17:23:32.90:799,33,0	0/0:10,0:10:30.09:0,30,921	0/0:22,0:6:6.02:0,6,78	0/0:24,0:7:9.03:0,9,189	0/0:36,0:39:99:0,102,3266	1/1:4,23:27:48.06:1188,48,0	1/1:5,11:16:14.89:371,15,0	0/0:28,0:28:45.15:0,45,1327	0/0:14,0:14:33.10:0,33,1191	1/1:11,15:26:44.71:1025,45,0	1/1:1,20:21:41.68:786,42,0	0/0:18,0:19:51.17:0,51,1718	0/0:19,0:20:48.16:0,48,1713	0/0:10,0:9:21.07:0,21,722	1/1:6,15:21:47.76:1121,48,0	0/0:21,0:21:54.17:0,54,1906	0/0:22,0:24:63.10:0,63,2018	1/1:12,15:26:17.69:446,18,0	0/0:15,0:14:33.09:0,33,910	0/0:21,0:22:63.22:0,63,2390	0/0:20,0:20:51.13:0,51,1894	0/0:13,0:14:36.12:0,36,1203	0/0:21,0:29:75.26:0,75,2567	0/0:15,0:17:25.79:0,26,659	0/0:27,0:30:66.23:0,66,2452	0/1:23,1:26:12.99:13,0,1598	0/0:23,0:24:48.64:0,49,1915	0/0:2,0:4:12.04:0,12,351
chr10	37534784	.	CAT	C	7053.87	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=13.968;DP=711;FS=3.984;HRun=0;HaplotypeScore=83.5083;InbreedingCoeff=0.9992;MQ=72.65;MQ0=1;MQRankSum=-1.998;QD=38.55;ReadPosRankSum=3.197;VQSLOD=6.9741;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,32:34:75.25:1148,75,0	0/0:7,0:7:21.03:0,21,367	0/0:22,0:22:60.19:0,60,1094	0/0:20,0:19:51.63:0,52,870	0/0:29,0:29:84.27:0,84,1570	1/1:1,17:18:45.15:689,45,0	1/1:0,29:29:84.29:1286,84,0	0/0:27,0:27:78.26:0,78,1464	0/0:31,0:31:90.29:0,90,1694	1/1:0,21:20:51.16:760,51,0	1/1:0,18:18:51.17:781,51,0	0/0:31,0:31:93.32:0,93,1784	0/0:20,0:20:60.21:0,60,1145	0/0:38,0:38:99:0,114,2162	1/1:1,38:39:96.33:1470,96,0	0/0:25,0:25:75.26:0,75,1437	0/0:27,0:27:81.28:0,81,1564	1/1:0,24:24:60.20:919,60,0	0/0:26,0:26:78.26:0,78,1457	0/0:28,0:28:84.29:0,84,1623	0/0:27,0:27:81.26:0,81,1506	0/0:27,0:25:69.24:0,69,1322	0/0:22,0:22:66.23:0,66,1262	0/0:33,0:33:99:0,99,1889	0/0:23,0:22:66.20:0,66,1209	0/0:26,0:26:78.26:0,78,1472	0/0:26,0:26:75.26:0,75,1448	0/0:13,0:13:36.12:0,36,695
chr10	37535258	.	TAAAA	T	2574.90	PASS	AC=14;AF=0.280;AN=50;BaseQRankSum=0.962;DP=266;FS=0.578;HRun=16;HaplotypeScore=51.5942;InbreedingCoeff=0.7382;MQ=51.52;MQ0=25;MQRankSum=0.437;QD=22.79;ReadPosRankSum=7.117;VQSLOD=1.8050;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,15:19:36.04:469,36,0	0/0:2,0:2:6:0,6,71	0/0:7,0:2:3.01:0,3,68	0/0:6,0:4:7.56:0,8,85	0/0:17,0:21:38.91:0,39,578	1/1:3,14:14:39.13:513,39,0	1/1:0,7:7:18.06:237,18,0	0/0:9,0:6:15.94:0,16,239	0/0:5,0:4:9.02:0,9,147	1/1:6,12:14:26.87:355,27,0	1/1:5,12:16:33.01:434,33,0	0/0:7,0:10:18.05:0,18,310	0/0:1,0:1:3.01:0,3,37	0/0:2,0:1:3.01:0,3,42	1/1:4,10:11:27.04:355,27,0	0/0:10,0:10:24.08:0,24,472	0/0:19,0:22:54.65:0,55,1025	1/1:6,14:17:29.85:390,30,0	0/0:5,0:2:3.01:0,3,50	./.	0/0:1,0:1:3.01:0,3,43	./.	0/0:6,0:7:15.02:0,15,261	0/0:0,0:1:3.01:0,3,57	./.	0/0:15,1:19:14.74:0,15,856	0/0:3,0:1:3.01:0,3,41	0/0:9,0:13:24.03:0,24,435
chr10	37537466	.	CTGTGTGTGTGTGTGTGTGTGTG	C	10895.81	PASS	AB=0.908;AC=35;AF=0.673;AN=52;BaseQRankSum=9.338;DP=540;FS=30.647;HRun=0;HaplotypeScore=259.8476;InbreedingCoeff=0.5106;MQ=64.98;MQ0=18;MQRankSum=-8.039;QD=31.31;ReadPosRankSum=-0.818;VQSLOD=2.0997;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:39:16.61:502,17,0	./.	0/0:38,0:19:5.24:0,5,216	0/0:48,0:26:21.06:0,21,562	0/0:15,0:15:24.06:0,24,1420	1/1:8,0:22:21.07:1026,21,0	0/1:21,0:20:22.70:33,0,23	1/1:23,0:22:14.55:196,15,0	0/0:19,0:19:30.10:0,30,2267	1/1:7,0:18:10.71:842,11,0	1/1:2,0:6:12.04:528,12,0	1/1:4,0:13:15.05:768,15,0	1/1:6,9:16:5.11:1158,5,0	1/1:8,13:21:9.03:522,9,0	1/1:8,0:23:33.10:1497,33,0	0/0:22,0:23:48.16:0,48,3847	0/0:40,0:40:84.20:0,84,6336	0/1:11,0:11:8.52:148,0,9	0/1:13,0:13:4.65:32,0,5	1/1:2,10:11:15.05:780,15,0	0/1:23,0:23:14.95:18,0,15	./.	1/1:6,0:13:6.02:226,6,0	1/1:6,0:13:4.57:109,5,0	1/1:5,15:20:15.05:797,15,0	1/1:6,10:17:32.75:1016,33,0	0/1:6,10:16:0.32:350,0,0	1/1:0,5:5:6.02:349,6,0
chr10	37538361	.	CT	C	401.20	PASS	AB=0.810;AC=13;AF=0.232;AN=56;BaseQRankSum=-0.375;DP=579;FS=3.463;HRun=17;HaplotypeScore=86.0495;InbreedingCoeff=0.2553;MQ=68.46;MQ0=9;MQRankSum=2.070;QD=1.79;ReadPosRankSum=5.384;VQSLOD=-0.6390;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:21,9:32:24.79:101,0,25	0/0:7,0:12:16.15:0,16,84	0/0:26,0:10:5.81:0,6,42	0/1:25,0:23:8.31:8,0,58	0/1:13,2:16:1.31:1,0,53	0/1:13,5:18:30.45:49,0,30	1/1:8,8:16:19.51:106,20,0	0/0:22,0:32:31.22:0,31,172	0/0:25,0:26:15.12:0,15,133	1/1:13,4:19:14.80:74,15,0	1/1:11,3:15:10.32:50,10,0	0/0:22,0:22:30.66:0,31,171	0/0:15,0:21:2.75:0,3,81	0/0:10,0:10:6.25:0,6,34	0/1:15,8:23:73.59:95,0,74	0/0:13,4:17:1.17:0,1,94	0/1:29,5:36:7.68:8,0,290	0/1:11,6:17:4.08:66,0,4	0/0:12,0:18:35.03:0,35,220	0/0:15,0:20:20.53:0,21,133	0/0:8,0:12:6.42:0,6,44	0/0:17,0:17:20.26:0,20,120	0/0:11,0:20:17.71:0,18,107	0/0:7,0:16:9.71:0,10,90	0/0:16,0:16:12.46:0,12,86	0/0:28,1:32:18.90:0,19,209	0/0:21,2:25:17.85:0,18,169	0/0:7,0:8:8.62:0,9,48
chr10	37538560	.	AACACACACACACACAC	A	1086.14	PASS	AB=0.883;AC=12;AF=0.222;AN=54;BaseQRankSum=3.469;DP=549;FS=28.756;HRun=0;HaplotypeScore=193.2294;InbreedingCoeff=0.3127;MQ=66.34;MQ0=27;MQRankSum=-2.822;QD=5.94;ReadPosRankSum=-1.392;VQSLOD=1.2352;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:17,14:31:4.01:12,0,4	0/0:10,0:10:9.01:0,9,266	./.	0/0:39,0:18:5.98:0,6,61	0/0:14,0:14:24.04:0,24,1321	0/1:6,11:17:1.94:254,0,2	1/1:16,0:16:11.93:90,12,0	0/0:20,0:19:17.95:0,18,179	0/0:18,0:18:24.02:0,24,538	0/1:18,0:18:25.64:26,0,49	1/1:7,0:9:3.01:71,3,0	0/1:27,0:26:52.83:134,0,53	0/0:10,0:18:20.93:0,21,451	0/0:12,0:12:14.99:0,15,483	1/1:10,16:26:12.04:524,12,0	0/0:21,0:20:41.30:0,41,1891	0/0:17,0:19:32.72:0,33,1071	0/1:19,0:17:74.26:85,0,74	0/0:15,0:15:13.80:0,14,356	0/0:7,0:9:9.02:0,9,325	0/0:22,0:24:36.10:0,36,1592	0/0:12,0:19:5.98:0,6,47	0/0:12,0:12:2.99:0,3,24	0/1:19,0:19:16.74:43,0,17	0/0:11,0:17:8.98:0,9,72	0/0:24,0:23:34.86:0,35,1130	0/0:12,0:14:24.01:0,24,587	0/0:12,0:12:17.98:0,18,484
chr10	37538584	.	CACACACACACACACACACACACACAT	C	421.54	PASS	AB=0.600;AC=5;AF=0.089;AN=56;BaseQRankSum=1.430;DP=577;FS=4.101;HRun=0;HaplotypeScore=265.6084;InbreedingCoeff=0.5581;MQ=51.08;MQ0=37;MQRankSum=-2.046;QD=6.11;ReadPosRankSum=-0.324;VQSLOD=2.0952;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:37:30.04:0,30,820	0/0:8,0:7:9.02:0,9,507	0/0:23,0:3:0:0,0,0	0/0:27,0:6:3.01:0,3,66	0/0:15,0:15:30.99:0,31,2309	0/0:17,0:17:18.02:0,18,360	0/0:22,0:21:36.09:0,36,1028	0/0:16,0:15:36.12:0,36,1058	0/0:23,0:23:45.07:0,45,2230	0/0:10,0:10:28.91:0,29,1057	0/0:10,0:9:18.95:0,19,623	1/1:16,17:31:7.38:319,7,0	0/0:24,0:24:45.56:0,46,2386	0/0:13,0:12:21.05:0,21,1126	0/0:28,0:28:33.01:0,33,674	0/0:30,0:29:65.66:0,66,5363	0/0:26,0:26:56.58:0,57,3865	0/0:17,0:14:29.44:0,29,963	0/0:14,0:13:29.52:0,30,1810	0/0:15,0:12:15.05:0,15,1205	0/0:34,0:31:58.08:0,58,3835	0/0:19,0:19:15.05:0,15,963	1/1:9,0:9:3.01:94,3,0	0/1:9,18:27:99:118,0,107	0/0:22,0:22:18.95:0,19,1026	0/0:29,0:28:65.71:0,66,3984	0/0:17,0:17:30.10:0,30,2283	0/0:10,0:9:26.12:0,26,1359
chr10	37539269	.	A	AG	2276.23	PASS	AB=1.000;AC=30;AF=0.536;AN=56;BaseQRankSum=6.423;DP=566;FS=9.262;HRun=2;HaplotypeScore=97.6955;InbreedingCoeff=0.4249;MQ=84.94;MQ0=1;MQRankSum=-1.352;QD=6.14;ReadPosRankSum=5.127;VQSLOD=0.3027;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:32,0:32:67.61:162,0,68	1/1:10,1:11:25.29:134,25,0	0/0:30,0:23:11.71:0,12,334	0/0:29,0:23:37.77:0,38,329	0/0:25,0:25:67.07:0,67,815	0/1:19,0:19:11.29:81,0,11	0/1:22,0:22:9.75:92,0,10	0/1:26,0:26:73.53:94,0,74	0/0:15,0:15:42.13:0,42,530	1/1:17,0:17:8.91:94,9,0	1/1:19,2:21:46.92:236,47,0	0/0:21,0:21:26.57:0,27,152	1/1:14,0:14:3.06:73,3,0	1/1:21,0:21:30.97:174,31,0	1/1:27,0:27:39.75:251,40,0	0/0:26,0:26:78.20:0,78,977	0/0:23,0:23:68.94:0,69,841	1/1:16,0:16:10.49:93,10,0	0/1:20,0:20:49.68:89,0,50	0/1:17,0:17:3.56:123,0,4	1/1:18,0:18:12.30:109,12,0	1/1:14,0:14:29.85:139,30,0	0/0:12,0:12:2.50:0,2,30	0/0:13,0:13:18.91:0,19,102	0/1:22,0:22:10.65:110,0,11	1/1:16,1:17:35.51:189,36,0	1/1:31,0:31:44.73:230,45,0	0/1:6,0:6:0.66:1,0,46
chr10	37539270	.	G	GC	10097.36	PASS	AB=0.970;AC=45;AF=0.804;AN=56;BaseQRankSum=-3.507;DP=579;FS=11.722;HRun=8;HaplotypeScore=77.6438;InbreedingCoeff=0.8712;MQ=85.05;MQ0=1;MQRankSum=-2.567;QD=22.00;ReadPosRankSum=0.135;VQSLOD=4.4631;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,24:31:63.19:724,63,0	1/1:1,10:11:33.04:364,33,0	0/1:30,1:24:18.31:18,0,132	0/0:31,0:24:36.01:0,36,208	0/0:24,0:24:67.72:0,68,575	1/1:3,17:20:33.10:381,33,0	1/1:2,19:21:42.12:485,42,0	1/1:3,20:24:57.05:607,57,0	0/0:15,0:15:42:0,42,376	1/1:2,13:16:45.10:495,45,0	1/1:3,20:23:60.06:658,60,0	1/1:7,2:23:22.76:115,23,0	1/1:3,12:16:30.09:344,30,0	1/1:1,20:21:54.16:622,54,0	1/1:1,26:27:72.21:830,72,0	0/0:26,0:26:72.02:0,72,655	0/0:23,0:23:63.01:0,63,571	1/1:1,15:16:36.11:415,36,0	1/1:3,17:20:48.06:516,48,0	1/1:2,15:17:41.95:434,42,0	1/1:1,17:18:42.12:485,42,0	1/1:2,11:15:33.08:359,33,0	1/1:4,1:18:19.99:104,20,0	1/1:5,0:14:14.20:72,14,0	1/1:4,18:22:51.15:589,51,0	1/1:2,15:17:48.02:497,48,0	1/1:2,29:31:78.23:899,78,0	1/1:6,0:6:8.99:82,9,0
chr10	37539411	.	GTGCCCCTTTGTCGTGCGCTGGC	G	5892.06	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=10.000;DP=658;FS=30.285;HRun=0;HaplotypeScore=340.6847;InbreedingCoeff=0.9150;MQ=79.07;MQ0=0;MQRankSum=-7.487;QD=33.67;ReadPosRankSum=2.801;VQSLOD=2.4663;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:23,28:51:11.72:697,12,0	0/0:15,0:15:45.14:0,45,3912	0/0:16,0:16:48.16:0,48,3046	0/0:24,0:24:69.24:0,69,4871	0/0:42,0:42:99:0,126,9749	1/1:13,14:27:24.08:1471,24,0	1/1:8,9:17:3.01:184,3,0	0/0:25,0:25:72.22:0,72,5407	0/0:18,0:18:54.19:0,54,4399	1/1:10,15:25:34.87:1428,35,0	1/1:10,7:17:3.01:88,3,0	0/0:35,0:35:99:0,102,9312	0/0:20,0:20:60.21:0,60,5448	0/0:19,0:19:57.20:0,57,5233	1/1:8,19:27:25.02:1473,25,0	0/0:24,0:24:66.23:0,66,5262	0/0:24,0:24:69.21:0,69,6250	1/1:4,7:11:9.03:552,9,0	0/0:20,0:20:60.21:0,60,4154	0/0:30,0:30:87.30:0,87,7577	0/0:35,0:35:99:0,102,8836	0/0:16,0:16:48.16:0,48,4159	0/0:16,0:16:48.16:0,48,4028	0/0:25,0:25:75.24:0,75,7048	0/0:15,0:15:42.14:0,42,2968	0/0:31,0:31:90.29:0,90,7657	0/0:26,0:26:78.27:0,78,7132	0/0:7,0:7:21.07:0,21,1904
chr10	37541021	.	T	TGAGGCTTGACAA	64058.66	PASS	AB=0.622;AC=43;AF=0.768;AN=56;BaseQRankSum=-4.716;DP=630;FS=0.827;HRun=0;HaplotypeScore=182.5177;InbreedingCoeff=0.8938;MQ=71.11;MQ0=0;MQRankSum=-14.979;QD=129.15;ReadPosRankSum=-2.875;VQSLOD=4.6016;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,9:22:51.12:2654,51,0	1/1:3,2:6:15.05:913,15,0	0/0:17,0:17:35.78:0,36,1130	0/0:17,0:17:41.48:0,41,1182	0/0:28,0:28:78.27:0,78,2798	1/1:12,9:24:54.14:2707,54,0	1/1:18,4:28:54.14:2616,54,0	1/1:32,5:42:99:5014,111,0	0/0:23,0:23:63.22:0,63,2333	1/1:7,14:24:66.23:3623,66,0	1/1:9,10:27:50.88:2316,51,0	1/1:9,13:25:66.16:3916,66,0	1/1:5,13:20:51.18:3052,51,0	1/1:8,10:21:51.18:2863,51,0	0/1:11,15:28:35.86:3893,0,36	0/0:24,0:24:63.22:0,63,2309	0/0:25,0:25:66.23:0,66,2363	1/1:6,3:12:27.09:1592,27,0	1/1:15,8:24:60.21:2982,60,0	1/1:8,16:25:72.25:3914,72,0	1/1:4,2:9:15.05:912,15,0	1/1:2,15:17:51.18:3012,51,0	1/1:6,5:11:33.11:1776,33,0	1/1:8,6:14:30.05:1371,30,0	1/1:9,9:19:51.13:2616,51,0	1/1:15,14:36:99:4803,102,0	1/1:10,21:35:81.28:4679,81,0	1/1:12,13:27:52.63:2834,53,0
chr10	37542038	.	TTGTGTGTGTGTGTG	T	3583.72	PASS	AB=0.831;AC=17;AF=0.304;AN=56;BaseQRankSum=4.383;DP=549;FS=28.250;HRun=0;HaplotypeScore=198.9449;InbreedingCoeff=0.5087;MQ=52.36;MQ0=17;MQRankSum=-0.819;QD=18.86;ReadPosRankSum=-1.144;VQSLOD=0.8569;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:12.02:0,12,425	1/1:4,0:4:2.94:18,3,0	0/0:23,0:11:5.94:0,6,41	0/0:28,0:11:0:0,0,0	0/0:9,0:15:18.06:0,18,809	0/0:27,0:27:15.85:0,16,560	0/0:24,0:21:24.07:0,24,824	0/1:18,0:17:26.57:50,0,27	0/0:11,0:16:33.10:0,33,1516	0/0:21,0:20:36.01:0,36,1355	0/0:15,0:15:15.03:0,15,593	0/0:13,0:13:25.90:0,26,1187	0/1:8,7:15:5.15:67,0,5	1/1:8,12:19:8.10:578,8,0	0/0:23,0:25:36.04:0,36,1499	0/0:18,0:22:33.11:0,33,1293	0/0:23,0:32:78.24:0,78,2948	0/0:11,0:10:23.85:0,24,884	0/1:16,5:18:21.82:285,0,22	1/1:12,7:19:2.59:245,3,0	0/0:24,0:22:11.59:0,12,68	1/1:5,8:11:15.01:442,15,0	0/0:10,0:10:21.07:0,21,1029	0/0:30,0:31:33.05:0,33,1071	1/1:11,13:24:18.06:671,18,0	1/1:11,14:26:35.74:573,36,0	0/1:12,12:24:2.45:572,0,2	0/1:6,0:5:83.74:84,0,187
chr10	37543424	.	G	GAA	6257.38	PASS	AB=0.961;AC=36;AF=0.643;AN=56;BaseQRankSum=-2.324;DP=635;FS=48.446;HRun=1;HaplotypeScore=104.1297;InbreedingCoeff=0.2311;MQ=50.66;MQ0=28;MQRankSum=1.402;QD=12.62;ReadPosRankSum=1.448;VQSLOD=-0.4870;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:35,0:34:5.52:381,0,6	1/1:7,0:7:16.98:126,17,0	0/0:20,0:13:32.88:0,33,291	0/0:38,0:14:17.21:0,17,162	0/0:20,0:19:41.94:0,42,345	0/1:24,0:23:8.90:238,0,9	1/1:27,0:25:17.70:405,18,0	1/1:26,0:26:41.52:594,42,0	0/1:13,0:12:4.08:4,0,48	0/1:29,0:29:70.25:431,0,70	1/1:3,15:18:26.96:210,27,0	0/1:26,0:25:10.83:339,0,11	1/1:22,0:21:23.46:285,23,0	1/1:25,0:24:23.02:321,23,0	0/1:28,0:27:43.09:381,0,43	0/0:29,0:28:60.71:0,61,535	0/0:32,0:30:69.47:0,69,568	0/1:16,0:16:56.27:138,0,56	1/1:11,0:10:5.85:158,6,0	1/1:21,0:21:5.40:284,5,0	1/1:24,0:24:26.77:434,27,0	1/1:18,0:17:34.75:286,35,0	1/1:23,1:23:21.25:309,21,0	0/1:13,24:35:34.55:35,0,74	1/1:13,0:13:30.66:236,31,0	0/1:23,0:21:50.51:338,0,51	0/1:21,0:20:7.29:199,0,7	1/1:8,0:7:2.96:125,3,0
chr10	37544425	.	A	ATATT	16649.03	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-13.827;DP=551;FS=6.320;HRun=0;HaplotypeScore=79.0636;InbreedingCoeff=0.9729;MQ=69.78;MQ0=0;MQRankSum=-2.525;QD=44.64;ReadPosRankSum=-0.585;VQSLOD=4.5623;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,21:29:48.16:1199,48,0	1/1:1,9:10:27.06:620,27,0	0/0:18,0:18:32.39:0,32,443	0/0:11,0:11:15.05:0,15,227	0/0:23,0:23:60.19:0,60,987	1/1:2,19:22:54.19:1348,54,0	1/1:2,11:13:24.08:599,24,0	1/1:11,21:32:24.32:1397,24,0	0/0:18,0:18:39.13:0,39,662	1/1:7,15:23:48.15:1147,48,0	1/1:7,10:18:33.11:818,33,0	0/0:23,0:23:57.19:0,57,961	1/1:4,9:14:24.21:545,24,0	1/1:5,16:21:39.13:974,39,0	1/1:3,14:18:30.10:745,30,0	0/0:17,0:17:39.13:0,39,658	0/0:27,0:27:63.17:0,63,998	1/1:9,17:26:48.16:1174,48,0	1/1:11,19:30:57.17:1217,57,0	1/1:6,15:22:48.98:1092,49,0	1/1:7,4:12:9.03:225,9,0	1/1:2,5:7:12.04:298,12,0	0/0:26,0:26:60.19:0,60,985	0/0:15,0:15:30.10:0,30,509	1/1:3,11:14:30.10:749,30,0	1/1:9,23:33:75.20:1681,75,0	1/1:7,7:17:24.08:597,24,0	1/1:6,5:11:9.03:225,9,0
chr10	37545669	.	T	TTTTTTC	18073.50	PASS	AB=0.767;AC=38;AF=0.679;AN=56;BaseQRankSum=-9.988;DP=645;FS=8.060;HRun=0;HaplotypeScore=103.8098;InbreedingCoeff=0.8406;MQ=61.14;MQ0=5;MQRankSum=-10.563;QD=39.46;ReadPosRankSum=0.483;VQSLOD=4.3201;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,33:37:75.17:2273,75,0	1/1:0,12:12:24.05:545,24,0	0/0:16,0:12:18.26:0,18,206	0/1:10,0:9:5.18:5,0,123	0/0:31,0:31:83.99:0,84,1450	1/1:1,17:19:24.08:745,24,0	1/1:0,8:10:9.03:296,9,0	1/1:5,19:28:69.86:1162,70,0	0/0:23,0:23:63.15:0,63,1130	1/1:1,16:22:41.73:741,42,0	1/1:1,24:28:45.09:1104,45,0	0/0:17,0:17:36.02:0,36,553	1/1:3,18:22:33.11:1064,33,0	1/1:2,14:18:30.10:943,30,0	1/1:3,20:24:38.16:1190,38,0	0/0:34,0:34:91.67:0,92,1567	0/0:26,0:26:68.71:0,69,1241	0/1:2,9:16:25.90:189,0,26	1/1:6,21:30:74.92:1172,75,0	1/1:3,28:38:66.16:1668,66,0	1/1:2,5:8:15.05:431,15,0	1/1:2,15:20:21:399,21,0	0/0:21,0:21:48.02:0,48,740	0/0:19,0:19:57.15:0,57,1120	1/1:0,28:34:39.13:1226,39,0	1/1:6,20:27:57.03:1167,57,0	1/1:1,24:30:39.02:1259,39,0	1/1:1,14:15:15.05:494,15,0
chr10	37548325	.	GT	G	821.85	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=7.625;DP=524;FS=2.914;HRun=9;HaplotypeScore=52.3692;InbreedingCoeff=0.9455;MQ=74.22;MQ0=0;MQRankSum=-1.432;QD=18.26;ReadPosRankSum=0.308;VQSLOD=3.7668;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,1:22:32.71:0,33,630	0/0:13,0:13:39.12:0,39,450	0/0:21,0:18:19.85:0,20,253	0/0:11,0:10:6.69:0,7,167	0/0:35,0:35:96.28:0,96,1107	0/0:16,0:16:45.13:0,45,519	0/0:10,0:10:24.07:0,24,277	0/0:28,0:28:63.19:0,63,726	0/0:16,0:16:45.09:0,45,505	0/0:31,0:31:87.25:0,87,996	0/0:13,0:13:33.09:0,33,372	1/1:0,13:13:36.02:329,36,0	0/0:17,0:17:23.84:0,24,515	0/0:12,0:12:33.10:0,33,379	0/0:28,0:29:87.07:0,87,971	0/0:20,0:20:60.14:0,60,670	0/0:27,0:27:78.21:0,78,889	0/0:10,0:10:30.07:0,30,333	0/0:18,0:18:48.13:0,48,546	0/0:25,0:25:66.20:0,66,761	0/0:8,0:8:21.06:0,21,242	0/0:9,0:9:24.07:0,24,277	1/1:4,22:26:56.91:522,57,0	1/1:2,4:6:12:110,12,0	0/0:24,0:24:66.16:0,66,748	0/0:22,1:23:29.70:0,30,596	0/0:32,0:32:87.25:0,87,993	0/0:9,0:9:15.04:0,15,173
chr10	37550822	.	A	AT	1101.32	PASS	AB=0.857;AC=7;AF=0.125;AN=56;BaseQRankSum=-7.139;DP=631;FS=1.980;HRun=9;HaplotypeScore=61.0320;InbreedingCoeff=0.7995;MQ=75.33;MQ0=0;MQRankSum=1.856;QD=15.09;ReadPosRankSum=-0.680;VQSLOD=3.6217;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:59.77:0,60,814	0/0:23,0:23:62.98:0,63,547	0/0:14,0:14:3.37:0,3,149	0/0:14,0:13:17.41:0,17,135	0/0:41,0:41:99:0,100,852	0/0:27,0:28:70.97:0,71,598	0/0:21,0:21:53.96:0,54,464	0/0:31,0:31:80.93:0,81,696	0/0:32,0:32:77.95:0,78,677	0/0:20,0:20:47.99:0,48,417	0/0:21,0:21:59.96:0,60,517	1/1:4,22:27:60:645,60,0	0/0:19,0:19:41.99:0,42,364	0/0:20,0:20:56.98:0,57,494	0/0:24,0:24:59.95:0,60,517	0/0:19,0:20:56.02:0,56,475	0/0:23,0:22:56.96:0,57,495	0/1:10,2:12:6.19:6,0,181	0/0:13,0:13:29.99:0,30,260	0/0:32,0:32:80.97:0,81,702	0/0:20,0:20:59.99:0,60,521	0/0:16,0:16:41.98:0,42,364	1/1:5,11:16:24.02:252,24,0	1/1:3,15:18:10.04:339,10,0	0/0:16,0:16:44.99:0,45,391	0/0:23,0:23:53.95:0,54,466	0/0:27,0:26:68.95:0,69,595	0/0:22,1:23:32.82:0,33,514
chr10	37551909	.	C	CACAA	28333.33	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-13.367;DP=662;FS=2.084;HRun=0;HaplotypeScore=90.7685;InbreedingCoeff=0.9978;MQ=83.33;MQ0=0;MQRankSum=-5.558;QD=55.66;ReadPosRankSum=2.636;VQSLOD=5.9373;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,13:20:42.06:913,42,0	1/1:4,8:12:18.06:462,18,0	0/0:25,0:25:62.88:0,63,1028	0/0:17,0:17:36.12:0,36,628	0/0:29,0:29:81.28:0,81,1431	1/1:3,28:31:72.25:1831,72,0	1/1:3,13:17:39.09:943,39,0	1/1:13,15:28:57.18:1365,57,0	0/0:30,0:30:84.28:0,84,1446	1/1:4,25:30:81.27:1989,81,0	1/1:7,20:28:51.09:1117,51,0	1/1:2,21:23:57.11:1348,57,0	1/1:5,21:26:72.18:1736,72,0	1/1:4,20:24:51.13:1252,51,0	1/1:3,22:25:63.22:1617,63,0	0/0:22,0:22:60.21:0,60,1060	0/0:30,0:30:84.29:0,84,1484	1/1:3,11:15:30.10:770,30,0	1/1:5,11:16:42.14:1055,42,0	1/1:7,25:32:69.19:1639,69,0	1/1:5,14:19:39.09:944,39,0	1/1:1,14:16:45.07:1021,45,0	1/1:5,26:33:66.18:1596,66,0	1/1:2,20:21:39.13:1002,39,0	1/1:1,17:18:39.13:1001,39,0	1/1:3,23:28:78.23:1813,78,0	1/1:6,29:37:96.29:2302,96,0	1/1:0,8:8:24.08:616,24,0
chr10	37556157	.	T	TG	2842.17	PASS	AB=0.723;AC=33;AF=0.589;AN=56;BaseQRankSum=-5.738;DP=525;FS=26.317;HRun=10;HaplotypeScore=78.2291;InbreedingCoeff=0.2386;MQ=85.96;MQ0=7;MQRankSum=-0.004;QD=8.59;ReadPosRankSum=-1.203;VQSLOD=0.2123;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:10,7:17:14.93:143,15,0	1/1:1,6:7:12.05:133,12,0	0/0:55,0:30:45.03:0,45,289	0/0:55,0:29:30.21:0,30,194	0/0:26,0:26:61.65:0,62,481	0/1:7,7:14:16.51:26,0,17	0/1:5,11:16:22.05:220,0,22	0/1:7,11:19:2.82:228,0,3	0/0:11,0:11:22.13:0,22,162	1/1:6,7:13:18.89:172,19,0	1/1:5,10:15:9.09:83,9,0	0/1:14,0:14:0.93:22,0,1	1/1:6,14:19:6.15:145,6,0	0/1:5,6:11:31.04:109,0,31	0/1:6,12:18:8.11:91,0,8	0/0:18,0:18:44.12:0,44,327	0/0:27,0:29:72.92:0,73,567	0/1:7,9:16:69.89:101,0,70	1/1:3,2:5:12.01:113,12,0	1/1:7,16:23:22.87:292,23,0	1/1:4,8:11:14.77:139,15,0	0/1:9,15:24:9.57:216,0,10	0/1:13,0:13:10.65:20,0,11	0/1:18,0:18:5.82:32,0,6	1/1:4,15:19:5.83:232,6,0	1/1:3,12:15:32.66:271,33,0	0/1:4,10:15:4.28:146,0,4	1/1:1,5:6:9.02:95,9,0
chr10	37556710	.	GTTTGT	G	4177.68	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=11.236;DP=656;FS=2.073;HRun=0;HaplotypeScore=124.5218;InbreedingCoeff=0.9977;MQ=75.88;MQ0=5;MQRankSum=-1.641;QD=28.04;ReadPosRankSum=1.774;VQSLOD=3.3725;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,19:26:36.12:678,36,0	0/0:9,0:9:21.07:0,21,540	0/0:38,0:31:47.23:0,47,1135	0/0:44,0:33:45.77:0,46,611	0/0:24,0:24:51.16:0,51,1338	1/1:6,13:19:30.10:560,30,0	1/1:9,13:22:22.89:392,23,0	0/0:31,0:31:48.16:0,48,1226	0/0:17,0:17:48.16:0,48,1310	1/1:3,13:16:39.13:727,39,0	1/1:5,17:22:35.95:541,36,0	0/0:34,0:34:90.30:0,90,2461	0/0:26,0:26:66.18:0,66,1651	0/0:23,0:23:39.13:0,39,1063	1/1:4,22:26:42.14:772,42,0	0/0:22,0:22:42.14:0,42,1155	0/0:33,0:33:78.24:0,78,1936	1/1:5,13:18:27.09:508,27,0	0/0:14,0:14:27.09:0,27,682	0/0:17,0:17:42.14:0,42,1064	0/0:14,0:14:39.12:0,39,1042	0/0:24,0:24:54.19:0,54,1518	0/0:18,0:18:48.16:0,48,1284	0/0:14,0:14:39.08:0,39,1034	0/0:19,0:19:36.12:0,36,925	0/0:35,1:35:30.78:0,31,2277	0/0:40,0:40:99:0,99,2607	0/0:9,0:9:24.07:0,24,583
chr10	37557884	.	GT	G	5409.19	PASS	AB=0.571;AC=37;AF=0.661;AN=56;BaseQRankSum=1.969;DP=437;FS=2.544;HRun=11;HaplotypeScore=48.8707;InbreedingCoeff=0.8717;MQ=72.06;MQ0=1;MQRankSum=0.814;QD=18.78;ReadPosRankSum=0.289;VQSLOD=5.8095;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,13:16:41.32:328,41,0	1/1:3,6:9:11.97:99,12,0	0/0:14,0:11:8.86:0,9,116	0/0:10,0:6:5.81:0,6,37	0/0:25,2:27:45.77:0,46,682	1/1:3,18:21:50.93:419,51,0	1/1:0,7:7:20.98:172,21,0	1/1:10,23:33:65.88:542,66,0	0/0:20,0:20:20.86:0,21,423	1/1:3,16:19:47.94:394,48,0	1/1:2,13:15:35.95:296,36,0	0/0:2,0:19:48.53:0,49,244	1/1:3,18:21:50.92:419,51,0	1/1:2,9:11:26.97:222,27,0	1/1:2,16:19:49.97:400,50,0	0/0:17,1:18:23.48:0,23,455	0/0:19,0:21:44.92:0,45,451	0/1:3,9:12:30.93:189,0,31	1/1:3,9:12:26.95:219,27,0	1/1:2,10:12:29.96:246,30,0	1/1:5,11:16:23.95:197,24,0	1/1:1,4:5:11.98:98,12,0	0/0:3,0:8:20.21:0,20,123	0/0:3,0:12:19.89:0,20,100	1/1:2,9:11:29.94:241,30,0	1/1:3,18:21:26.91:406,27,0	1/1:4,19:24:55.95:449,56,0	1/1:1,3:4:8.98:74,9,0
chr10	37559001	.	T	TCA	5547.90	PASS	AB=0.647;AC=27;AF=0.540;AN=50;BaseQRankSum=-7.651;DP=804;FS=0.415;HRun=0;HaplotypeScore=131.6351;InbreedingCoeff=0.2331;MQ=58.73;MQ0=15;MQRankSum=1.165;QD=10.67;ReadPosRankSum=-0.988;VQSLOD=4.5592;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:42,0:40:25.14:178,25,0	0/1:7,7:14:47.12:211,0,47	./.	./.	0/0:22,0:24:53.32:0,53,552	./.	1/1:40,0:40:8.97:88,9,0	0/1:27,10:34:69.10:212,0,69	0/0:26,0:28:50.70:0,51,523	1/1:34,0:34:27.01:256,27,0	1/1:3,0:19:2.74:12,3,0	0/0:38,0:39:68.64:0,69,741	0/1:15,16:31:99:413,0,140	1/1:5,21:26:11.77:754,12,0	0/1:7,0:36:0.12:0,0,0	0/0:24,0:26:9.32:0,9,435	0/0:24,0:24:19.83:0,20,401	1/1:9,0:14:5.92:43,6,0	1/1:10,11:21:0.92:315,1,0	0/1:21,20:42:54.82:545,0,55	0/1:17,21:37:41.48:297,0,41	0/1:9,13:23:19.27:170,0,19	0/0:17,1:22:7.25:0,7,446	0/0:41,0:42:78.01:0,78,849	1/1:2,26:26:10.83:614,11,0	1/1:6,21:29:25.74:881,26,0	0/1:13,14:27:4.21:386,0,4	0/1:4,9:13:19.13:170,0,19
chr10	37560184	.	G	GT	6900.17	PASS	AB=0.752;AC=38;AF=0.679;AN=56;BaseQRankSum=-8.523;DP=650;FS=10.928;HRun=12;HaplotypeScore=69.2733;InbreedingCoeff=0.6234;MQ=68.12;MQ0=0;MQRankSum=0.472;QD=14.05;ReadPosRankSum=-0.767;VQSLOD=4.2631;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,25:30:48.07:465,48,0	1/1:4,11:15:5.14:212,5,0	0/1:13,2:12:26.52:27,0,126	0/0:13,0:14:13.52:0,14,139	0/0:31,0:34:65.21:0,65,561	1/1:3,20:27:49.23:408,49,0	1/1:4,11:15:11.15:270,11,0	1/1:10,27:41:63.95:768,64,0	0/0:24,0:24:53.64:0,54,394	1/1:6,18:28:46.52:546,47,0	1/1:7,16:23:4.18:338,4,0	0/0:19,3:22:21.48:0,21,315	0/1:10,18:30:29.20:221,0,29	1/1:5,16:24:6.84:344,7,0	1/1:8,17:24:36.01:341,36,0	0/0:26,1:28:32.39:0,32,390	0/0:12,0:14:24.89:0,25,162	1/1:2,4:7:11.86:102,12,0	1/1:6,9:18:15.85:272,16,0	1/1:3,13:16:38.89:359,39,0	0/1:6,12:17:11.22:151,0,11	1/1:5,24:29:54.03:511,54,0	0/1:28,3:32:8.81:9,0,427	0/0:23,0:23:62.61:0,63,460	1/1:4,19:23:32.08:366,32,0	1/1:8,26:35:43.12:705,43,0	1/1:6,2:28:34.72:223,35,0	1/1:1,11:12:27.04:263,27,0
chr10	37562747	.	AAC	A	49.34	PASS	AC=4;AF=0.333;AN=12;BaseQRankSum=-2.287;DP=421;FS=0.000;HRun=0;HaplotypeScore=3.5575;MQ=12.61;MQ0=171;MQRankSum=1.345;QD=2.60;ReadPosRankSum=1.211;VQSLOD=0.6478;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	./.	./.	./.	1/1:11,3:1:3.01:43,3,0	./.	0/0:22,0:6:18.06:0,18,329	./.	./.	./.	./.	./.	./.	./.	./.	0/0:7,0:2:3.01:0,3,55	./.	0/0:13,0:1:3.01:0,3,52	./.	./.	./.	./.	0/0:24,2:5:15.05:0,15,263	./.	1/1:2,3:2:6.02:86,6,0
chr10	37562831	.	AAC	A	6103.61	PASS	AB=0.658;AC=21;AF=0.404;AN=52;BaseQRankSum=5.697;DP=823;FS=15.989;HRun=0;HaplotypeScore=64.4604;InbreedingCoeff=0.7411;MQ=30.69;MQ0=212;MQRankSum=1.397;QD=16.41;ReadPosRankSum=2.466;VQSLOD=3.3624;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:15:21.07:0,21,377	1/1:7,19:18:39.13:558,39,0	./.	./.	0/0:33,0:26:33.11:0,33,604	0/0:30,0:15:30.10:0,30,544	0/0:23,0:13:18.06:0,18,305	0/1:16,9:11:99:208,0,242	0/0:31,0:23:33.11:0,33,598	0/0:60,0:37:99:0,102,1745	0/0:32,0:20:39.13:0,39,710	0/0:28,0:16:27.09:0,27,491	1/1:7,33:23:41.99:576,42,0	1/1:5,31:25:45.11:621,45,0	0/0:39,0:23:39.10:0,39,696	0/0:45,0:34:38.86:0,39,712	0/0:17,0:9:21.07:0,21,384	0/0:9,0:2:6.02:0,6,110	0/1:9,12:13:94.85:391,0,95	1/1:10,21:18:45.15:644,45,0	1/1:6,37:23:54.18:773,54,0	1/1:11,24:18:36.05:516,36,0	0/0:40,0:22:39.13:0,39,711	0/0:19,0:11:18.06:0,18,330	1/1:8,19:21:33.11:472,33,0	0/1:12,23:20:99:486,0,152	1/1:12,30:20:30.10:429,30,0	1/1:1,10:10:30.10:430,30,0
chr10	37564226	.	C	CT	3934.03	PASS	AB=0.725;AC=21;AF=0.375;AN=56;BaseQRankSum=-13.762;DP=450;FS=2.334;HRun=12;HaplotypeScore=59.5861;InbreedingCoeff=0.8031;MQ=65.10;MQ0=0;MQRankSum=-0.528;QD=19.38;ReadPosRankSum=1.588;VQSLOD=4.7109;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,18:22:29.01:430,29,0	0/0:3,0:10:10.65:0,11,31	0/1:3,0:2:0:0,0,0	0/0:10,0:6:8.82:0,9,58	1/1:6,19:25:57.01:536,57,0	0/1:5,13:19:1.91:293,0,2	0/1:3,6:9:3.88:128,0,4	0/0:6,0:31:47.28:0,47,138	1/1:3,15:19:32.89:306,33,0	1/1:4,18:23:31.87:484,32,0	1/1:3,14:17:39.01:370,39,0	0/0:16,0:16:44.74:0,45,328	0/0:6,0:16:20.31:0,20,59	0/0:5,0:22:30.54:0,31,88	1/1:1,14:15:39.06:380,39,0	1/1:2,14:16:17.15:328,17,0	1/1:4,16:20:42.07:409,42,0	1/1:2,13:15:11.15:270,11,0	0/0:3,0:12:21.83:0,22,78	0/0:4,0:22:36.03:0,36,118	0/0:2,0:3:2.03:0,2,6	0/0:3,0:6:6.08:0,6,18	0/0:11,0:11:23.79:0,24,175	0/0:4,0:4:8.92:0,9,64	0/0:4,0:30:55.93:0,56,175	0/0:25,1:27:41.40:0,41,454	0/0:1,0:23:42.78:0,43,124	0/0:4,0:4:11.93:0,12,88
chr10	37568768	.	GA	G	10101.80	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=20.523;DP=783;FS=4.858;HRun=4;HaplotypeScore=104.8153;InbreedingCoeff=0.9994;MQ=84.92;MQ0=0;MQRankSum=-4.592;QD=33.45;ReadPosRankSum=4.579;VQSLOD=4.6698;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,54:58:99:1914,162,0	0/0:22,0:22:66.21:0,66,899	0/0:25,0:25:68.79:0,69,904	0/0:27,0:26:74.71:0,75,989	0/0:30,0:30:87.29:0,87,1217	1/1:0,15:15:42.13:504,42,0	1/1:2,15:17:45.14:540,45,0	0/0:30,0:30:84.28:0,84,1177	0/0:28,0:28:81.27:0,81,1134	1/1:0,28:28:84.26:1007,84,0	1/1:1,23:24:66.20:792,66,0	1/1:2,29:31:81.25:972,81,0	0/0:28,0:28:81.25:0,81,1112	0/0:34,0:34:99:0,99,1370	1/1:3,34:37:99:1224,102,0	0/0:32,0:32:96.32:0,96,1345	0/0:33,0:33:99:0,99,1386	1/1:1,30:31:84.25:1002,84,0	0/0:25,0:25:75.25:0,75,1048	0/0:39,0:39:99:0,108,1468	0/0:57,0:57:99:0,160,2223	0/0:23,0:23:66.17:0,66,901	1/1:1,8:9:24.07:288,24,0	1/1:0,22:22:66.20:792,66,0	0/0:26,0:26:75.24:0,75,1034	1/1:1,21:22:66.19:780,66,0	0/0:22,0:22:63.21:0,63,881	1/1:0,8:8:24.07:288,24,0
chr10	37568857	.	TTC	T	3573.19	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=13.195;DP=751;FS=0.907;HRun=0;HaplotypeScore=102.8326;InbreedingCoeff=0.9924;MQ=90.46;MQ0=0;MQRankSum=-3.252;QD=38.01;ReadPosRankSum=0.938;VQSLOD=5.6412;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:64,0:64:99:0,178,3298	0/0:17,0:17:51.17:0,51,984	0/0:32,0:32:96.21:0,96,1692	0/0:28,0:28:72.22:0,72,1272	0/0:29,0:29:87.30:0,87,1674	0/0:12,0:12:36.12:0,36,695	0/0:27,0:27:81.24:0,81,1476	0/0:32,0:32:93.32:0,93,1775	0/0:22,0:22:63.22:0,63,1216	0/0:40,0:40:99:0,117,2159	0/0:17,0:17:48.16:0,48,927	1/1:5,14:19:51.16:740,51,0	0/0:33,0:33:99:0,99,1901	0/0:33,0:33:96.28:0,96,1744	0/0:37,0:37:99:0,108,2067	0/0:34,0:34:99:0,102,1969	0/0:28,0:28:84.27:0,84,1572	0/0:15,0:15:39.13:0,39,753	0/0:23,0:23:66.17:0,66,1193	0/0:26,0:26:72.25:0,72,1390	0/0:28,0:28:81.28:0,81,1542	0/0:36,0:36:99:0,105,2026	1/1:1,28:29:69.23:1055,69,0	1/1:1,11:12:26.90:390,27,0	0/0:22,0:22:66.23:0,66,1252	1/1:2,28:30:29.31:1204,29,0	0/0:22,0:22:66.23:0,66,1246	1/1:0,4:4:12.04:184,12,0
chr10	37569948	.	AT	A	2898.03	PASS	AB=0.819;AC=21;AF=0.375;AN=56;BaseQRankSum=0.692;DP=601;FS=0.000;HRun=12;HaplotypeScore=76.3948;InbreedingCoeff=0.7816;MQ=66.46;MQ0=0;MQRankSum=1.823;QD=11.50;ReadPosRankSum=1.396;VQSLOD=3.4282;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:44:85.39:0,85,462	0/1:3,6:9:9.53:118,0,10	0/0:13,0:14:20.76:0,21,164	0/1:13,0:12:3.03:3,0,74	0/0:19,2:22:13.65:0,14,500	0/0:7,0:22:43.06:0,43,250	0/0:3,0:15:25.57:0,26,128	1/1:6,20:27:58.74:442,59,0	0/0:24,1:25:42.88:0,43,605	0/0:16,0:28:58.14:0,58,395	0/0:6,0:15:37.49:0,37,226	0/0:18,1:21:21.69:0,22,380	1/1:1,15:17:34.90:261,35,0	1/1:5,17:24:45.88:334,46,0	0/0:10,0:29:40.12:0,40,244	0/0:26,1:27:42.82:0,43,598	0/0:19,1:20:25.32:0,25,428	0/0:5,0:21:43.03:0,43,237	1/1:11,13:24:37.82:283,38,0	1/1:4,21:25:56.74:441,57,0	1/1:9,21:32:54.83:406,55,0	1/1:0,11:12:31.92:238,32,0	0/0:11,1:12:3.79:0,4,211	0/1:20,4:24:9.67:10,0,438	1/1:6,7:13:20.89:162,21,0	0/0:27,0:28:31.46:0,31,501	1/1:8,23:31:29.19:410,29,0	0/0:5,0:5:15.01:0,15,145
chr10	37573118	.	A	AT	7239.39	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-13.643;DP=658;FS=14.236;HRun=8;HaplotypeScore=62.0876;InbreedingCoeff=0.9789;MQ=72.66;MQ0=0;MQRankSum=-0.474;QD=29.31;ReadPosRankSum=-2.078;VQSLOD=3.2785;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:75.02:0,75,682	1/1:3,11:14:33.10:381,33,0	0/0:19,0:19:25.94:0,26,304	0/0:14,0:14:4.45:0,4,229	0/0:36,0:36:92.24:0,92,826	0/0:30,0:30:77.68:0,78,687	0/0:13,0:13:30:0,30,275	1/1:4,27:31:81.22:924,81,0	0/0:17,0:17:45.02:0,45,412	0/0:28,0:28:78.04:0,78,714	0/0:24,0:24:66.04:0,66,604	0/0:22,0:22:63.03:0,63,576	1/1:1,20:21:54.16:623,54,0	1/1:3,18:21:48.14:554,48,0	0/0:28,0:28:72.01:0,72,653	0/0:27,0:27:78:0,78,699	0/0:29,0:29:81.03:0,81,740	0/0:24,0:24:72.04:0,72,659	1/1:7,14:22:44.93:478,45,0	1/1:0,33:33:99:1110,99,0	1/1:0,9:9:27.08:312,27,0	1/1:2,23:25:63.15:712,63,0	0/0:28,0:28:78.04:0,78,713	0/0:11,0:11:30.01:0,30,275	1/1:2,31:33:84.25:970,84,0	0/0:23,0:23:66.03:0,66,604	1/1:1,36:38:99:1176,102,0	0/0:9,0:9:27.01:0,27,247
chr10	37573925	.	G	GCACA	10072.20	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-4.911;DP=704;FS=1.603;HRun=0;HaplotypeScore=145.6614;InbreedingCoeff=0.9745;MQ=62.75;MQ0=7;MQRankSum=-0.184;QD=41.97;ReadPosRankSum=0.535;VQSLOD=5.3594;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:90.26:0,90,1456	1/1:4,6:11:15.05:373,15,0	0/0:29,0:13:24.07:0,24,371	0/0:52,0:21:3.98:0,4,274	0/0:22,0:22:51.17:0,51,861	0/0:17,0:18:33.10:0,33,517	0/0:21,0:22:57.15:0,57,914	1/1:17,18:39:74.57:1349,75,0	0/0:17,0:17:42.13:0,42,676	0/0:27,0:27:72.25:0,72,1211	0/0:23,0:23:66.16:0,66,1028	0/0:22,0:23:54.18:0,54,889	1/1:3,16:22:44.74:1051,45,0	1/1:6,10:19:35.86:829,36,0	0/0:28,0:31:78.25:0,78,1263	0/0:18,0:18:45.13:0,45,704	0/0:25,0:25:54.18:0,54,906	0/0:23,0:23:39.55:0,40,894	1/1:4,5:8:21.03:450,21,0	1/1:5,17:24:44.56:1056,45,0	1/1:14,25:43:71.24:1543,71,0	1/1:3,15:20:35.59:771,36,0	0/0:30,0:30:72.25:0,72,1215	0/0:24,0:24:57.17:0,57,935	1/1:3,22:25:51.18:1248,51,0	0/0:26,0:26:60.20:0,60,1013	1/1:3,23:27:57.20:1402,57,0	0/0:16,0:16:32.39:0,32,481
chr10	37574192	.	G	GA	6324.14	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-10.759;DP=560;FS=0.732;HRun=9;HaplotypeScore=57.1122;InbreedingCoeff=0.9875;MQ=71.18;MQ0=0;MQRankSum=0.547;QD=21.22;ReadPosRankSum=-1.171;VQSLOD=4.9958;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:83.94:0,84,723	1/1:2,10:12:27.07:298,27,0	0/0:16,0:15:26.13:0,26,246	0/0:17,0:16:22.86:0,23,175	0/0:30,0:30:68.90:0,69,586	0/0:18,0:18:47.99:0,48,417	0/0:13,0:13:29.98:0,30,260	1/1:7,22:29:66.12:689,66,0	0/0:20,0:20:50.98:0,51,442	0/0:21,0:21:50.99:0,51,443	0/0:22,0:22:65.95:0,66,565	1/1:2,12:14:27.03:285,27,0	1/1:3,14:17:27.07:298,27,0	1/1:5,17:22:15.64:373,16,0	0/0:19,0:19:50.96:0,51,439	0/0:13,0:13:35.99:0,36,312	0/0:26,0:26:65.96:0,66,572	0/0:16,0:16:35.93:0,36,302	1/1:5,2:9:11.70:95,12,0	1/1:8,20:30:62.83:622,63,0	1/1:4,24:28:54.15:596,54,0	1/1:6,10:16:21.06:231,21,0	1/1:2,15:17:27.07:299,27,0	1/1:3,19:22:51.14:563,51,0	1/1:2,13:15:33.09:364,33,0	1/1:3,22:25:20.02:638,20,0	1/1:4,24:28:57.15:622,57,0	1/1:1,12:14:12.90:353,13,0
chr10	37576345	.	C	CGT	1942.98	PASS	AB=0.875;AC=38;AF=0.731;AN=52;BaseQRankSum=-2.563;DP=553;FS=11.259;HRun=0;HaplotypeScore=91.8821;InbreedingCoeff=0.3136;MQ=54.12;MQ0=11;MQRankSum=0.411;QD=4.62;ReadPosRankSum=-3.296;VQSLOD=0.5706;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:29,1:30:3.33:146,0,3	1/1:3,0:6:3:27,3,0	./.	./.	1/1:21,0:21:1.95:49,2,0	0/1:15,7:22:5.92:38,0,6	1/1:29,1:30:5.04:112,5,0	1/1:27,0:27:26.40:163,26,0	0/1:12,5:17:13.20:38,0,13	1/1:24,0:24:20.97:225,21,0	1/1:7,0:7:3.01:44,3,0	0/0:16,0:15:9.67:0,10,89	1/1:19,0:19:18.44:163,18,0	1/1:13,8:20:3:28,3,0	1/1:13,0:12:3:25,3,0	0/1:14,0:14:10.73:41,0,11	1/1:15,10:25:8.95:133,9,0	1/1:26,0:25:1.54:179,2,0	1/1:16,0:16:21.76:162,22,0	1/1:12,0:11:8.72:71,9,0	1/1:44,0:41:23.98:228,24,0	1/1:13,0:12:5.99:49,6,0	0/0:6,0:10:2.84:0,3,14	0/0:18,0:24:16.09:0,16,136	1/1:21,0:20:2.94:18,3,0	0/0:20,0:23:8.52:0,9,42	1/1:13,0:13:17.84:154,18,0	0/0:9,0:12:2.50:0,2,9
chr10	37576387	.	T	TGTGT	2284.72	PASS	AB=1.000;AC=34;AF=0.607;AN=56;BaseQRankSum=-5.313;DP=492;FS=15.461;HRun=0;HaplotypeScore=90.3970;InbreedingCoeff=0.2181;MQ=55.39;MQ0=11;MQRankSum=-0.882;QD=5.97;ReadPosRankSum=-0.167;VQSLOD=1.0360;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:26:18.51:166,0,19	1/1:5,0:5:3.01:52,3,0	0/1:4,0:2:0:0,0,0	0/0:5,0:4:0:0,0,0	0/1:21,0:20:19.94:52,0,20	0/1:20,0:20:26.16:38,0,26	0/1:31,0:31:19.63:147,0,20	1/1:25,0:25:8.35:31,8,0	0/1:17,0:17:6.42:6,0,31	1/1:19,0:18:17.50:189,17,0	1/1:7,0:7:2.99:23,3,0	0/0:16,0:15:9.59:0,10,123	1/1:24,0:24:18.53:302,19,0	1/1:19,0:18:3.01:52,3,0	1/1:10,0:9:3.01:50,3,0	0/1:11,0:11:3.84:4,0,32	1/1:23,0:23:8.16:37,8,0	0/1:23,0:22:45.57:185,0,46	1/1:12,0:12:15.34:193,15,0	1/1:13,0:13:8.89:140,9,0	1/1:45,0:40:24.08:431,24,0	1/1:13,0:12:6.02:98,6,0	0/0:18,0:17:2.80:0,3,28	0/0:28,0:27:17.09:0,17,256	0/0:12,7:19:1.97:0,2,6	0/0:18,0:17:9.47:0,9,81	1/1:14,0:14:13.86:250,14,0	0/0:4,0:4:2.60:0,3,10
chr10	37577661	.	TC	T	7163.93	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-2.328;DP=615;FS=9.226;HRun=8;HaplotypeScore=87.7566;InbreedingCoeff=0.9947;MQ=80.99;MQ0=0;MQRankSum=-2.335;QD=22.46;ReadPosRankSum=2.773;VQSLOD=5.1513;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:3,0:35:69.17:0,69,365	1/1:0,7:7:15.02:145,15,0	0/0:21,0:20:47.23:0,47,483	0/0:26,0:24:32.18:0,32,415	0/0:12,0:12:33.06:0,33,371	0/0:6,0:18:28.75:0,29,146	0/0:4,0:24:49:0,49,259	1/1:6,17:23:48.04:452,48,0	0/0:20,0:20:57.17:0,57,688	0/0:2,0:17:37.50:0,38,201	0/0:2,0:15:28.52:0,29,145	1/1:6,23:29:65.77:636,66,0	1/1:5,17:22:51.08:493,51,0	1/1:1,25:26:72.11:695,72,0	0/0:3,0:27:57.62:0,58,303	0/0:23,0:23:60.18:0,60,725	0/0:37,0:37:85.13:0,85,1190	0/0:0,0:21:60.34:0,60,307	1/1:6,11:17:33.04:319,33,0	1/1:3,18:21:51.08:493,51,0	1/1:7,29:36:72.11:695,72,0	1/1:1,8:9:21.03:203,21,0	1/1:4,16:20:41.81:405,42,0	1/1:2,31:33:81.12:782,81,0	1/1:2,11:13:33.05:319,33,0	1/1:1,29:32:60.62:774,61,0	1/1:2,24:26:63.10:608,63,0	1/1:0,5:5:15.02:145,15,0
chr10	37579991	.	C	CTTTATACA	9302.49	PASS	AB=0.622;AC=9;AF=0.161;AN=56;BaseQRankSum=-1.898;DP=720;FS=0.000;HRun=0;HaplotypeScore=178.4242;InbreedingCoeff=0.9049;MQ=89.01;MQ0=0;MQRankSum=-14.036;QD=100.03;ReadPosRankSum=-1.621;VQSLOD=5.1212;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,120,3497	0/0:12,0:12:36.12:0,36,1039	0/0:27,0:27:81.24:0,81,2011	0/0:29,0:29:87.23:0,87,2268	0/0:31,0:31:75.23:0,75,2069	0/0:25,0:25:75.22:0,75,2069	0/0:28,0:28:84.27:0,84,2317	0/0:33,0:33:87.25:0,87,2116	0/0:28,0:28:81.26:0,81,2235	0/0:29,0:29:84.28:0,84,2310	0/0:15,0:15:42.14:0,42,1230	1/1:8,13:24:63.22:2545,63,0	0/0:36,0:36:99:0,102,2885	0/0:32,0:32:93.32:0,93,2710	0/0:36,0:36:99:0,105,2873	0/0:19,0:19:54.19:0,54,1582	0/0:29,0:29:87.30:0,87,2548	0/0:23,0:23:63.22:0,63,1805	0/0:22,0:22:63.22:0,63,1828	0/0:29,0:29:84.26:0,84,2243	0/0:33,0:33:99:0,99,2685	0/0:25,0:25:72.25:0,72,2094	1/1:11,8:21:54.06:1963,54,0	1/1:3,8:15:20.60:848,21,0	0/0:19,0:19:51.16:0,51,1393	0/1:11,17:28:3.60:3385,0,4	0/0:27,0:27:81.28:0,81,2367	1/1:1,4:5:15.01:562,15,0
chr10	37584315	.	ATG	A	1958.71	PASS	AB=0.931;AC=5;AF=0.089;AN=56;BaseQRankSum=-8.242;DP=813;FS=3.143;HRun=0;HaplotypeScore=229.3394;InbreedingCoeff=0.7890;MQ=62.58;MQ0=4;MQRankSum=3.029;QD=26.47;ReadPosRankSum=-0.803;VQSLOD=3.4673;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,2:27:56.85:0,57,689	0/0:9,0:9:22.12:0,22,221	0/0:24,0:20:39.25:0,39,629	0/1:25,1:21:12.38:12,0,387	0/0:29,0:29:53.43:0,53,401	0/0:27,0:27:70.26:0,70,815	0/0:46,0:46:99:0,102,1227	0/0:33,1:34:37.71:0,38,1056	0/0:21,0:21:40.45:0,40,378	0/0:32,0:32:94.31:0,94,1047	0/0:20,0:20:53.28:0,53,564	0/0:48,0:48:99:0,103,1368	0/0:33,0:33:78.22:0,78,902	0/0:30,0:29:47.98:0,48,737	0/0:40,0:40:99:0,102,1111	0/0:23,0:23:50.35:0,50,511	0/0:19,0:19:32.31:0,32,366	0/0:35,0:35:99:0,102,1305	0/0:17,0:17:49.03:0,49,661	0/0:24,0:24:63.79:0,64,670	0/0:59,0:59:99:0,125,1449	0/0:29,0:29:75.30:0,75,845	0/0:26,0:26:58.05:0,58,436	0/0:43,0:42:98.39:0,98,596	0/0:22,0:22:61.24:0,61,706	1/1:2,31:33:96.17:1412,96,0	0/0:22,0:21:53.77:0,54,584	1/1:0,14:14:42.14:662,42,0
chr10	37584317	.	G	GCACA	27983.27	PASS	AB=0.964;AC=45;AF=0.804;AN=56;BaseQRankSum=-12.089;DP=858;FS=2.374;HRun=0;HaplotypeScore=174.1946;InbreedingCoeff=0.9128;MQ=62.56;MQ0=4;MQRankSum=-3.061;QD=39.03;ReadPosRankSum=0.495;VQSLOD=5.1660;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,18:30:47.53:1015,48,0	1/1:3,7:10:15.05:375,15,0	0/0:22,0:18:11.52:0,12,273	0/1:26,0:21:2.42:2,0,258	1/1:11,1:30:31.16:203,31,0	1/1:5,21:28:50.75:1153,51,0	1/1:10,35:47:78:1889,78,0	1/1:16,17:36:62.58:1214,63,0	1/1:18,0:30:36.30:443,36,0	1/1:4,28:35:89.56:1979,90,0	1/1:5,17:22:36.12:902,36,0	1/1:4,42:51:99:2587,111,0	1/1:4,29:35:69.24:1728,69,0	1/1:4,22:29:65.59:1466,66,0	1/1:2,35:41:95.69:2218,96,0	1/1:9,0:28:43.21:698,43,0	1/1:14,0:21:12.13:124,12,0	1/1:11,23:35:66.01:1592,66,0	1/1:7,14:21:44.89:962,45,0	1/1:2,24:26:60.21:1504,60,0	1/1:12,45:61:99:2486,105,0	1/1:6,22:28:51.18:1278,51,0	0/0:4,0:26:59.71:0,60,543	0/0:8,0:44:92.78:0,93,849	1/1:5,16:22:47.95:1116,48,0	0/0:33,0:33:47.32:0,47,512	1/1:3,15:22:47.74:1049,48,0	0/0:15,0:15:35.72:0,36,277
chr10	37586669	.	GCC	G	1478.57	PASS	AB=0.994;AC=10;AF=0.179;AN=56;BaseQRankSum=-1.446;DP=640;FS=0.492;HRun=9;HaplotypeScore=104.4185;InbreedingCoeff=0.5259;MQ=74.80;MQ0=0;MQRankSum=-1.429;QD=8.85;ReadPosRankSum=0.121;VQSLOD=0.7501;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,120,1872	0/0:6,0:6:11.99:0,12,102	0/0:13,0:13:36.10:0,36,502	0/0:21,0:22:44.80:0,45,513	0/0:36,0:36:99:0,102,1025	0/0:17,0:17:48.10:0,48,712	0/0:19,0:21:59.66:0,60,852	0/0:26,0:26:38.45:0,38,443	0/0:32,0:32:90.27:0,90,1378	0/0:14,0:14:24.08:0,24,393	0/0:22,0:22:63.19:0,63,966	1/1:1,17:18:45:524,45,0	0/1:24,0:24:3.14:3,0,416	0/0:22,0:22:16.72:0,17,444	0/0:32,0:32:90.27:0,90,1380	0/0:26,0:26:66.02:0,66,993	0/0:27,0:27:78.23:0,78,1205	0/0:21,0:21:57.14:0,57,861	0/1:19,0:19:58.11:58,0,241	0/1:26,0:26:6.85:7,0,418	0/1:37,1:38:29.52:30,0,620	0/0:19,0:19:53.95:0,54,465	1/1:1,14:15:30.09:350,30,0	1/1:0,27:27:57.17:664,57,0	0/0:15,0:15:12.05:0,12,251	0/0:22,0:22:58.64:0,59,484	0/0:31,0:31:83.98:0,84,758	0/0:4,0:4:5.99:0,6,50
chr10	37586677	.	C	CA	936.44	PASS	AB=1.000;AC=10;AF=0.179;AN=56;BaseQRankSum=-6.233;DP=639;FS=12.443;HRun=0;HaplotypeScore=95.7690;InbreedingCoeff=0.4943;MQ=74.98;MQ0=0;MQRankSum=1.217;QD=6.33;ReadPosRankSum=-4.928;VQSLOD=1.4682;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,120,1570	0/0:5,0:5:6.48:0,6,17	0/0:16,0:16:41.26:0,41,526	0/0:21,0:21:42.07:0,42,491	0/0:38,0:38:99:0,111,1414	0/0:19,0:19:57.10:0,57,700	0/0:23,0:23:61.52:0,62,805	1/1:30,0:30:8.20:171,8,0	0/0:32,0:32:93.26:0,93,1220	0/0:12,0:12:33.09:0,33,412	0/0:21,0:21:63.21:0,63,850	0/0:17,0:17:42.61:0,43,208	0/1:23,0:23:4.10:4,0,74	0/0:21,0:21:10.46:0,10,60	0/0:31,0:31:93.29:0,93,1233	0/0:27,0:27:68.30:0,68,895	0/0:29,0:29:87.22:0,87,1110	0/0:22,0:21:59.75:0,60,782	0/1:19,0:19:4.06:4,0,27	0/0:22,0:22:35.93:0,36,96	0/0:39,0:39:59.06:0,59,182	0/1:20,0:20:36.14:36,0,45	0/0:15,0:15:31.20:0,31,165	0/0:27,0:27:53.97:0,54,263	0/0:13,0:13:18.35:0,18,47	1/1:1,21:22:24.32:771,24,0	0/1:31,0:31:8.04:8,0,129	1/1:0,3:3:6.02:86,6,0
chr10	37587423	.	A	AAC	1427	PASS	AB=0.547;AC=3;AF=0.054;AN=56;BaseQRankSum=4.137;DP=727;FS=3.444;HRun=0;HaplotypeScore=89.9152;InbreedingCoeff=0.6396;MQ=91.59;MQ0=0;MQRankSum=-0.634;QD=41.97;ReadPosRankSum=0.089;VQSLOD=5.3701;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:60,0:60:99:0,175,2570	0/0:14,0:14:42.12:0,42,611	0/0:34,0:34:87.28:0,87,1365	0/0:26,0:26:72.21:0,72,1062	0/0:32,0:32:96.31:0,96,1447	0/0:27,0:27:81.26:0,81,1217	0/0:25,0:25:72.23:0,72,1077	0/0:21,0:21:60.19:0,60,875	0/0:20,0:20:60.19:0,60,899	0/0:21,0:21:60.20:0,60,918	0/0:16,0:16:48.15:0,48,710	0/0:30,0:30:84.27:0,84,1258	0/0:25,0:25:69.23:0,69,1049	0/0:21,0:21:63.20:0,63,944	0/0:32,0:32:96.33:0,96,1469	0/0:20,0:20:60.20:0,60,919	0/0:49,0:49:99:0,141,2109	0/0:17,0:17:48.15:0,48,713	0/0:29,0:29:84.23:0,84,1238	0/0:20,0:20:57.19:0,57,868	0/0:48,0:48:99:0,141,2124	0/0:31,0:31:90.29:0,90,1353	0/0:15,0:15:45.15:0,45,682	0/0:25,0:25:69.22:0,69,1030	0/0:14,0:14:42.14:0,42,639	0/1:5,24:29:13.65:1295,0,14	0/0:21,0:21:63.21:0,63,961	1/1:1,4:5:12.04:232,12,0
chr10	37587859	.	TA	T	2521.03	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.357;DP=647;FS=18.592;HRun=4;HaplotypeScore=65.1427;InbreedingCoeff=0.9995;MQ=80.19;MQ0=0;MQRankSum=-2.540;QD=30.01;ReadPosRankSum=2.569;VQSLOD=1.9663;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,126,1764	0/0:13,0:13:36.09:0,36,484	0/0:16,0:16:45.15:0,45,614	0/0:19,0:19:37.09:0,37,632	0/0:18,0:18:51.17:0,51,714	0/0:15,0:15:45.15:0,45,630	0/0:27,0:27:78.26:0,78,1092	0/0:25,0:25:69.23:0,69,966	0/0:23,0:23:66.21:0,66,908	0/0:23,0:23:60.20:0,60,840	0/0:9,0:9:27.09:0,27,376	1/1:1,31:32:84.22:1008,84,0	0/0:32,1:33:63.54:0,64,1309	0/0:26,0:26:78.26:0,78,1079	0/0:28,0:28:84.28:0,84,1176	0/0:22,0:22:63.20:0,63,867	0/0:29,0:29:87.29:0,87,1218	0/0:28,0:28:81.27:0,81,1134	0/0:15,0:15:42.14:0,42,588	0/0:21,0:21:63.21:0,63,881	0/0:40,0:40:99:0,120,1680	0/0:14,0:14:42.13:0,42,571	1/1:1,17:18:51.16:612,51,0	1/1:2,32:34:87.27:1044,87,0	0/0:18,0:18:51.17:0,51,714	0/0:17,0:17:51.16:0,51,698	0/0:24,0:24:72.24:0,72,1008	0/0:16,0:16:48.10:0,48,600
chr10	37589187	.	CT	C	19038.52	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=9.990;DP=821;FS=9.688;HRun=6;HaplotypeScore=82.4919;InbreedingCoeff=0.9997;MQ=77.90;MQ0=0;MQRankSum=-4.153;QD=29.07;ReadPosRankSum=2.008;VQSLOD=5.1545;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,33:37:96.24:1032,96,0	1/1:1,13:14:39.10:419,39,0	0/0:21,0:21:35.38:0,35,613	0/0:15,0:15:33.06:0,33,384	0/0:36,0:36:99:0,108,1406	1/1:2,20:22:60.15:645,60,0	1/1:0,22:22:63.16:677,63,0	1/1:0,42:42:99:1346,126,0	0/0:38,0:38:99:0,114,1463	1/1:5,45:50:99:1354,126,0	1/1:2,29:31:69.17:742,69,0	1/1:0,26:26:75.19:806,75,0	1/1:1,31:32:87.22:934,87,0	1/1:2,27:29:72.18:774,72,0	1/1:1,43:44:99:1387,129,0	0/0:37,0:37:99:0,111,1460	0/0:19,0:19:57.19:0,57,750	1/1:0,21:21:60.15:645,60,0	1/1:0,21:21:63.15:671,63,0	1/1:2,30:32:78.19:838,78,0	1/1:3,33:36:96.24:1032,96,0	1/1:1,22:23:63.16:677,63,0	1/1:1,28:29:75.05:806,75,0	1/1:2,31:33:87.22:935,87,0	1/1:4,32:36:90.23:967,90,0	1/1:0,27:27:81.20:870,81,0	1/1:0,38:38:99:1192,111,0	1/1:1,9:10:27.07:290,27,0
chr10	37590130	.	CT	C	2706.15	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=11.095;DP=511;FS=7.176;HRun=1;HaplotypeScore=55.4773;InbreedingCoeff=0.9564;MQ=59.13;MQ0=1;MQRankSum=4.695;QD=36.57;ReadPosRankSum=2.104;VQSLOD=3.9050;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:81.28:0,81,1290	0/0:7,0:7:11.63:0,12,191	0/0:9,0:7:15.05:0,15,240	0/0:16,0:10:27.09:0,27,395	0/0:17,0:17:42.14:0,42,655	0/0:11,0:11:33.11:0,33,527	0/0:41,0:41:99:0,123,1936	0/0:33,0:33:90.28:0,90,1375	0/0:18,0:18:54.18:0,54,840	0/0:12,0:12:36.11:0,36,535	0/0:8,0:8:18.06:0,18,279	1/1:0,35:35:93.31:1299,93,0	0/0:28,0:28:81.28:0,81,1290	0/0:25,0:25:75.24:0,75,1175	0/0:35,0:35:99:0,105,1652	0/0:13,0:13:39.13:0,39,624	0/0:21,0:21:63.21:0,63,1007	0/0:13,0:13:39.13:0,39,624	0/0:14,0:13:36.12:0,36,576	0/0:6,0:5:15.05:0,15,239	0/0:31,0:31:93.32:0,93,1486	0/0:4,0:4:12.04:0,12,192	1/1:0,7:7:21.07:292,21,0	1/1:0,32:32:90.30:1257,90,0	0/0:6,0:6:18.06:0,18,288	0/0:14,0:14:39.13:0,39,624	0/0:20,0:20:60.18:0,60,932	0/0:7,0:7:18.06:0,18,288
chr10	37590404	.	A	AT	4205.91	PASS	AB=0.636;AC=19;AF=0.339;AN=56;BaseQRankSum=-11.333;DP=463;FS=0.819;HRun=9;HaplotypeScore=49.6545;InbreedingCoeff=0.9054;MQ=57.81;MQ0=4;MQRankSum=1.186;QD=23.76;ReadPosRankSum=-0.420;VQSLOD=4.1130;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:19:41.01:0,41,341	1/1:1,3:4:12.02:125,12,0	0/0:3,0:3:5.94:0,6,44	0/0:6,0:6:11.99:0,12,104	0/0:31,0:31:74.93:0,75,642	0/0:17,0:17:44.94:0,45,384	0/0:7,0:7:14.88:0,15,116	1/1:13,32:43:24.68:942,25,0	0/0:18,0:17:44.94:0,45,384	0/0:21,0:21:62.18:0,62,522	0/0:15,0:15:29.60:0,30,260	0/0:7,0:8:23.02:0,23,185	1/1:4,13:17:42.08:452,42,0	1/1:3,12:15:14.05:312,14,0	0/0:15,0:15:35.99:0,36,313	0/0:8,0:8:21:0,21,182	0/0:29,0:29:71.94:0,72,618	0/0:8,0:8:17.92:0,18,147	1/1:4,13:17:36.10:398,36,0	1/1:2,16:18:42.07:451,42,0	1/1:1,6:6:15.04:166,15,0	0/1:3,4:7:4:118,0,4	0/0:13,0:13:32.99:0,33,286	0/0:7,0:7:14.92:0,15,121	1/1:2,17:18:48.13:531,48,0	0/0:35,0:34:92.28:0,92,775	1/1:4,23:28:66.01:711,66,0	0/0:25,0:25:50.95:0,51,443
chr10	37591747	.	CT	C	3531.17	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=11.251;DP=575;FS=4.677;HRun=8;HaplotypeScore=55.4620;InbreedingCoeff=0.9474;MQ=64.21;MQ0=2;MQRankSum=2.181;QD=23.08;ReadPosRankSum=3.109;VQSLOD=4.3130;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,29:32:87.14:840,87,0	0/0:5,0:5:12.04:0,12,145	0/0:17,0:12:26.58:0,27,261	0/0:15,0:7:1.86:0,2,12	0/0:25,0:25:54.15:0,54,640	1/1:2,14:16:39.06:377,39,0	1/1:1,17:18:36.06:348,36,0	0/0:37,0:35:81.24:0,81,961	0/0:21,0:21:54.17:0,54,651	1/1:5,15:20:42.06:406,42,0	1/1:2,21:23:57.08:548,57,0	0/0:22,0:22:56.75:0,57,650	0/0:15,0:15:39.12:0,39,471	0/0:12,0:12:33.10:0,33,392	1/1:1,21:22:51.08:493,51,0	0/0:19,0:19:45.14:0,45,544	0/0:43,0:43:99:0,117,1408	1/1:2,20:22:54.08:521,54,0	0/0:20,0:19:51.10:0,51,579	0/0:27,1:28:46.24:0,46,830	0/0:11,0:11:24.06:0,24,278	0/0:10,0:10:21.03:0,21,229	0/0:25,0:25:63.19:0,63,759	0/0:24,0:24:66.20:0,66,797	0/0:15,0:15:36.11:0,36,435	0/0:24,2:26:25.17:0,25,574	0/0:25,0:25:63.15:0,63,724	0/0:7,0:7:9.03:0,9,109
chr10	37592389	.	C	CAG	1762.68	PASS	AB=0.566;AC=3;AF=0.054;AN=56;BaseQRankSum=-8.400;DP=749;FS=0.721;HRun=0;HaplotypeScore=106.7968;InbreedingCoeff=0.6332;MQ=82.65;MQ0=0;MQRankSum=-3.621;QD=34.56;ReadPosRankSum=1.777;VQSLOD=6.0301;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:48.12:0,48,708	0/0:5,0:5:12.04:0,12,184	0/0:20,0:20:57.15:0,57,832	0/0:21,0:21:54.16:0,54,802	0/0:20,0:20:48.15:0,48,708	0/0:27,0:27:57.12:0,57,813	0/0:31,0:31:90.29:0,90,1351	0/0:38,0:38:99:0,99,1386	0/0:26,0:26:75.24:0,75,1125	0/0:36,0:36:72.24:0,72,1101	0/0:23,0:23:48.16:0,48,730	0/0:29,0:29:87.26:0,87,1284	0/0:27,0:27:69.23:0,69,1040	0/0:28,0:28:81.28:0,81,1239	0/0:40,0:40:99:0,111,1692	0/0:31,0:31:84.24:0,84,1232	0/0:25,0:25:72.21:0,72,1071	0/0:23,0:23:63.15:0,63,915	0/0:26,0:26:66.22:0,66,983	0/0:18,0:18:27.09:0,27,405	0/0:40,0:40:99:0,99,1412	0/0:28,0:28:63.20:0,63,933	0/0:19,0:19:33.11:0,33,500	0/0:34,0:34:99:0,99,1432	0/0:23,0:23:55.03:0,55,781	0/1:7,19:30:71.56:1000,0,72	0/0:32,0:32:81.22:0,81,1167	1/1:0,21:21:45.15:869,45,0
chr10	37592766	.	AG	A	7201.06	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-3.440;DP=773;FS=2.981;HRun=3;HaplotypeScore=100.3708;InbreedingCoeff=0.9999;MQ=81.13;MQ0=0;MQRankSum=-1.096;QD=33.34;ReadPosRankSum=2.076;VQSLOD=5.0071;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,53:53:99:1859,150,0	0/0:11,0:11:33.08:0,33,437	0/0:17,0:17:44.73:0,45,629	0/0:22,0:22:50.72:0,51,668	0/0:25,0:25:69.21:0,69,973	1/1:1,15:16:39.12:484,39,0	1/1:0,26:26:63.20:781,63,0	0/0:29,0:29:84.26:0,84,1162	0/0:27,0:27:81.26:0,81,1146	1/1:1,22:23:66.20:807,66,0	1/1:0,23:23:66.21:816,66,0	0/0:26,0:26:78.25:0,78,1099	0/0:33,0:33:96.31:0,96,1361	0/0:36,0:36:99:0,102,1452	1/1:0,45:45:99:1413,114,0	0/0:34,0:34:99:0,99,1423	0/0:28,0:28:81.26:0,81,1147	1/1:0,30:30:84.26:1041,84,0	0/0:25,0:25:72.21:0,72,981	0/0:27,0:27:75.22:0,75,1021	0/0:49,0:49:99:0,144,2043	0/0:23,0:23:69.22:0,69,964	0/0:12,0:12:36.12:0,36,518	0/0:32,0:32:96.31:0,96,1360	0/0:29,0:29:87.29:0,87,1249	0/0:27,1:28:44.05:0,44,1052	0/0:26,0:26:78.26:0,78,1123	0/0:18,0:18:51.16:0,51,713
chr10	37594692	.	ATGTGTGTGTG	A	1395.75	PASS	AB=0.974;AC=17;AF=0.340;AN=50;BaseQRankSum=3.218;DP=499;FS=6.592;HRun=0;HaplotypeScore=141.3007;InbreedingCoeff=0.5680;MQ=60.37;MQ0=16;MQRankSum=-2.891;QD=10.19;ReadPosRankSum=1.776;VQSLOD=1.9940;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:6:0,6,265	1/1:4,0:4:2.90:16,3,0	./.	0/0:22,0:13:3.01:0,3,41	0/0:19,0:19:30.09:0,30,970	0/0:17,0:16:27.09:0,27,977	0/0:19,0:19:24.06:0,24,677	0/1:26,0:24:16:16,0,133	0/0:10,0:12:27.09:0,27,734	0/0:20,0:18:26.88:0,27,704	0/0:21,0:21:9.02:0,9,194	0/0:17,0:18:8.33:0,8,46	1/1:8,1:9:6.02:159,6,0	1/1:16,1:17:6.02:178,6,0	0/0:25,0:23:21.07:0,21,578	0/0:16,0:17:18.01:0,18,643	0/0:22,0:23:39.13:0,39,1343	0/0:33,0:32:43.35:0,43,1251	./.	1/1:13,3:15:15.01:313,15,0	0/1:14,0:12:18.87:19,0,62	1/1:6,2:7:8.76:195,9,0	0/1:11,0:12:20.90:21,0,27	./.	1/1:4,1:6:9.01:181,9,0	0/0:19,0:19:16.22:0,16,203	1/1:20,2:24:20.42:470,20,0	0/0:12,0:14:15.05:0,15,248
chr10	37594814	.	CGT	C	2287.85	PASS	AB=0.836;AC=24;AF=0.444;AN=54;BaseQRankSum=2.160;DP=681;FS=12.970;HRun=0;HaplotypeScore=133.3106;InbreedingCoeff=0.4717;MQ=55.77;MQ0=26;MQRankSum=0.277;QD=7.73;ReadPosRankSum=3.539;VQSLOD=2.5534;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:2.20:0,2,17	1/1:2,5:7:1.48:32,1,0	./.	0/0:50,0:18:2.30:0,2,37	0/0:14,0:13:15.03:0,15,194	0/0:26,0:26:18:0,18,147	0/0:37,0:36:8.53:0,9,64	0/1:25,6:31:8.95:89,0,9	0/0:27,0:27:27.24:0,27,561	0/0:11,0:10:17.96:0,18,155	0/0:15,0:14:3:0,3,26	0/0:6,0:22:11.72:0,12,85	1/1:6,13:20:32.92:353,33,0	1/1:7,12:21:32.76:335,33,0	0/0:31,0:31:10.85:0,11,91	0/1:22,2:24:14.29:14,0,600	0/1:28,1:28:20.73:21,0,515	0/0:24,0:24:14.40:0,14,91	1/1:21,5:25:0.20:183,0,0	1/1:8,10:18:36.10:412,36,0	1/1:26,12:41:32.97:294,33,0	1/1:4,8:13:11.65:117,12,0	0/0:7,0:11:4.02:0,4,16	0/0:14,0:37:12.99:0,13,96	0/1:8,11:20:99:170,0,105	1/1:12,0:25:8.51:106,9,0	1/1:7,8:15:30.09:343,30,0	1/1:2,0:2:0.47:1,0,0
chr10	37594830	.	T	TGC	444.82	PASS	AB=0.960;AC=9;AF=0.161;AN=56;BaseQRankSum=4.447;DP=642;FS=4.817;HRun=0;HaplotypeScore=135.1226;InbreedingCoeff=-0.1968;MQ=51.33;MQ0=26;MQRankSum=-2.588;QD=2.32;ReadPosRankSum=-4.641;VQSLOD=0.5989;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:25:7.99:8,0,179	0/0:8,0:8:10.22:0,10,76	0/0:33,0:12:28.45:0,28,251	0/0:44,0:13:33.94:0,34,340	0/0:11,0:10:23.94:0,24,269	0/1:21,1:22:99:115,0,150	0/1:29,0:28:99:138,0,131	0/0:22,0:22:42.87:0,43,482	0/0:28,0:28:69.52:0,70,783	0/1:8,7:14:99:165,0,155	0/1:17,0:16:7.63:8,0,90	0/1:23,0:22:23.86:24,0,58	0/0:18,0:18:38.76:0,39,290	0/0:22,0:22:50.74:0,51,386	0/1:27,0:27:28.13:28,0,160	0/0:30,0:30:82.25:0,82,945	0/0:26,0:25:60.03:0,60,738	0/1:21,0:21:83.52:84,0,93	0/0:19,0:18:50.80:0,51,401	0/0:17,0:17:44.78:0,45,342	0/0:45,0:43:89.69:0,90,695	0/0:13,0:12:17.53:0,18,138	0/1:13,0:11:11.48:11,0,37	0/0:43,0:41:7.49:0,7,164	0/0:23,0:22:41.84:0,42,365	0/0:30,0:30:81.27:0,81,602	0/0:16,0:16:38.78:0,39,291	0/0:1,0:1:2.99:0,3,23
chr10	37595487	.	CAAACA	C	13454.82	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=15.390;DP=692;FS=11.728;HRun=0;HaplotypeScore=127.7486;InbreedingCoeff=0.9879;MQ=62.51;MQ0=10;MQRankSum=0.709;QD=33.64;ReadPosRankSum=2.477;VQSLOD=4.1608;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,26:38:22.45:976,22,0	1/1:2,4:6:9.03:168,9,0	0/0:28,0:19:24.08:0,24,498	0/0:39,0:14:18:0,18,376	0/0:32,0:32:84.27:0,84,2162	1/1:6,19:25:33.11:617,33,0	1/1:8,17:25:36.12:674,36,0	1/1:19,18:37:57.18:938,57,0	0/0:18,0:18:42.14:0,42,1150	1/1:5,16:21:48.16:897,48,0	1/1:5,12:17:39.13:730,39,0	0/0:23,0:23:60.21:0,60,1658	1/1:7,11:18:27.09:505,27,0	1/1:5,16:21:45.15:842,45,0	1/1:6,24:30:63.22:1179,63,0	0/0:23,0:23:39.13:0,39,1100	0/0:40,0:40:84.28:0,84,2225	1/1:7,28:36:78.27:1459,78,0	1/1:4,14:18:42.14:708,42,0	1/1:9,13:23:36.12:647,36,0	1/1:5,9:14:18.06:337,18,0	1/1:1,16:17:39.13:706,39,0	0/0:13,0:13:27.09:0,27,724	0/0:30,0:30:79.51:0,80,2193	1/1:6,23:29:57.20:1062,57,0	0/0:27,0:27:23.16:0,23,1795	1/1:4,21:25:54.19:1010,54,0	0/0:19,0:19:45.15:0,45,1244
chr10	37595930	.	T	TAG	984.93	PASS	AB=0.833;AC=35;AF=0.673;AN=52;BaseQRankSum=-2.156;DP=119;FS=15.358;HRun=0;HaplotypeScore=26.1911;InbreedingCoeff=0.4009;MQ=107.94;MQ0=0;MQRankSum=-2.043;QD=12.16;ReadPosRankSum=-0.953;VQSLOD=1.0473;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,0:7:17.97:147,18,0	1/1:1,0:1:3:26,3,0	0/0:24,0:13:24.67:0,25,278	0/1:22,0:12:13.41:13,0,68	0/0:3,0:3:8.98:0,9,92	1/1:0,3:4:6.02:120,6,0	1/1:1,0:10:14.76:98,15,0	1/1:3,0:4:9.45:78,9,0	0/0:1,0:1:2.99:0,3,24	1/1:0,1:1:3.01:58,3,0	1/1:1,0:1:3:25,3,0	0/0:2,0:2:0.89:0,1,2	1/1:1,0:1:0.89:2,1,0	1/1:1,0:3:5.98:58,6,0	1/1:0,2:2:6.02:117,6,0	0/0:3,0:3:5.96:0,6,68	0/0:1,0:1:3:0,3,26	1/1:1,3:4:3.48:62,3,0	1/1:1,1:4:9.02:115,9,0	./.	0/1:0,0:3:0:0,0,0	1/1:0,1:3:0.30:48,0,0	0/1:3,0:3:9.51:17,0,10	0/0:4,0:4:8.03:0,8,57	1/1:2,0:2:6:51,6,0	1/1:5,0:5:9.01:86,9,0	1/1:0,0:1:2.88:15,3,0	./.
chr10	37595941	.	TG	T	293.62	PASS	AC=22;AF=0.440;AN=50;BaseQRankSum=0.111;DP=129;FS=2.557;HRun=8;HaplotypeScore=30.5310;InbreedingCoeff=0.5486;MQ=111.09;MQ0=0;MQRankSum=0.095;QD=8.16;ReadPosRankSum=-0.286;VQSLOD=-0.1915;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:4:12.04:0,12,144	1/1:1,0:1:3:29,3,0	0/0:28,0:15:18.68:0,19,183	0/0:24,0:14:17.42:0,17,111	0/0:3,0:3:6.01:0,6,60	0/0:3,0:3:6.02:0,6,71	0/0:9,0:9:15.03:0,15,169	1/1:1,4:5:11.98:110,12,0	0/0:2,0:2:6:0,6,60	0/0:3,0:3:6.01:0,6,64	0/0:1,0:1:3.01:0,3,35	1/1:0,5:5:2.93:28,3,0	1/1:0,2:2:2.94:18,3,0	1/1:4,0:4:3.46:25,3,0	0/0:2,0:2:3.01:0,3,36	./.	0/0:3,0:3:9.03:0,9,106	0/0:4,0:4:6.02:0,6,71	1/1:3,1:4:6:54,6,0	./.	1/1:2,0:2:2.99:23,3,0	1/1:2,1:3:2.98:22,3,0	1/1:0,2:2:6.01:58,6,0	1/1:2,4:6:6:58,6,0	0/0:1,0:1:2.50:0,2,9	0/0:3,0:3:3.01:0,3,36	1/1:2,0:2:3:29,3,0	./.
chr10	37596698	.	GTA	G	774.81	PASS	AB=0.989;AC=20;AF=0.385;AN=52;BaseQRankSum=-1.512;DP=369;FS=10.296;HRun=0;HaplotypeScore=56.0510;InbreedingCoeff=0.2890;MQ=34.44;MQ0=130;MQRankSum=0.502;QD=4.90;ReadPosRankSum=-3.656;VQSLOD=0.0396;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:6:5.36:0,5,22	./.	1/1:21,0:1:3:29,3,0	0/0:22,0:3:0.71:0,1,42	0/0:26,0:26:30.10:0,30,571	0/0:15,0:12:10.63:0,11,44	0/0:21,0:8:7.79:0,8,35	1/1:11,0:3:8.94:65,9,0	0/0:18,0:12:9.02:0,9,172	0/1:19,0:19:1.27:124,0,1	0/1:12,0:12:7.40:7,0,20	0/1:9,1:5:5.43:31,0,5	1/1:7,0:6:8.96:88,9,0	0/1:7,0:6:0.03:0,0,0	0/0:12,0:7:2.74:0,3,12	0/0:14,0:8:9.03:0,9,169	0/0:23,0:8:12.04:0,12,226	0/1:9,0:4:9.69:16,0,10	1/1:1,6:5:9:96,9,0	0/1:10,0:10:11.14:11,0,30	./.	0/0:9,0:9:5.49:0,5,23	0/0:12,0:12:8.26:0,8,37	0/0:16,0:5:2.62:0,3,13	0/1:12,0:12:2.25:31,0,2	1/1:20,0:15:42:376,42,0	0/1:9,0:8:8.54:32,0,9	1/1:4,0:4:3:25,3,0
chr10	37596794	.	G	GTCTC	980.25	PASS	AB=0.815;AC=18;AF=0.450;AN=40;BaseQRankSum=-3.745;DP=435;FS=20.451;HRun=0;HaplotypeScore=90.2531;InbreedingCoeff=0.4076;MQ=32.39;MQ0=102;MQRankSum=0.796;QD=5.27;ReadPosRankSum=-3.066;VQSLOD=-0.1143;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:7,0:7:0:0,0,0	./.	./.	0/1:23,0:24:0.26:0,0,0	0/0:12,0:15:6.01:0,6,56	./.	./.	0/0:14,0:10:6.01:0,6,74	0/0:11,0:13:14.06:0,14,138	./.	1/1:11,0:8:2.32:12,2,0	1/1:15,4:17:15.94:351,16,0	1/1:9,3:14:8.77:152,9,0	./.	0/0:19,0:13:6.01:0,6,74	0/1:11,5:17:28.66:180,0,29	./.	1/1:9,1:3:3.01:70,3,0	1/1:24,0:24:9:120,9,0	1/1:18,0:7:3.01:40,3,0	0/1:12,2:15:0:0,0,0	0/0:16,0:14:2.85:0,3,28	0/1:10,0:14:30.56:31,0,82	0/0:16,0:15:0:0,0,0	0/0:14,0:17:24.03:0,24,223	1/1:9,1:8:8.99:154,9,0	0/0:3,0:3:6.01:0,6,56
chr10	37597009	.	TA	T	5095.09	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=9.461;DP=544;FS=4.743;HRun=7;HaplotypeScore=59.9461;InbreedingCoeff=0.9857;MQ=70.86;MQ0=1;MQRankSum=-0.172;QD=25.86;ReadPosRankSum=3.673;VQSLOD=5.6325;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,39:42:99:1129,111,0	0/0:5,0:5:15.03:0,15,174	0/0:9,0:8:10.08:0,10,124	0/0:16,0:15:12.51:0,13,140	0/0:23,0:23:51.14:0,51,612	1/1:1,19:20:57.12:579,57,0	1/1:1,26:27:60.13:611,60,0	0/0:35,0:35:93.28:0,93,1141	0/0:12,0:12:36.03:0,36,415	1/1:2,14:16:42.08:421,42,0	1/1:3,10:13:30.06:303,30,0	0/0:15,0:15:36.09:0,36,426	0/0:14,0:14:42.13:0,42,524	0/0:17,0:17:45.12:0,45,539	1/1:1,20:21:51.11:518,51,0	0/0:20,0:20:48.13:0,48,575	0/0:33,0:33:87.24:0,87,1049	1/1:3,13:16:36.08:367,36,0	0/0:20,0:20:57.16:0,57,680	0/0:16,0:16:45.14:0,45,559	0/0:22,0:22:63.19:0,63,774	0/0:12,0:12:33.10:0,33,410	0/0:16,0:16:39.11:0,39,474	0/0:20,0:20:60.19:0,60,751	0/0:21,0:20:63.09:0,63,734	1/1:3,28:31:84.12:830,84,0	0/0:21,0:21:48.12:0,48,572	1/1:0,11:11:33.07:336,33,0
chr10	37597196	.	T	TTG	679.81	PASS	AB=0.937;AC=10;AF=0.179;AN=56;BaseQRankSum=1.939;DP=611;FS=3.188;HRun=0;HaplotypeScore=98.9032;InbreedingCoeff=0.1865;MQ=64.92;MQ0=12;MQRankSum=-5.807;QD=4.22;ReadPosRankSum=0.473;VQSLOD=2.6687;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:11,13:28:18.21:18,0,91	0/0:10,0:10:11.46:0,11,83	0/0:25,0:9:15.94:0,16,123	0/0:21,0:10:7.24:0,7,97	0/0:30,0:29:57.34:0,57,382	0/1:15,0:14:16.42:162,0,16	0/1:15,0:15:9.53:42,0,10	0/0:21,0:20:32.42:0,32,257	0/0:22,0:22:29.89:0,30,263	0/1:22,0:21:14.85:296,0,15	1/1:16,0:16:11.94:113,12,0	0/0:20,0:20:48.07:0,48,458	0/0:27,0:27:9.23:0,9,103	1/1:19,0:19:1:13,1,0	0/1:29,0:29:32.47:43,0,32	0/0:23,0:23:11.02:0,11,174	0/0:22,0:22:41.36:0,41,488	0/1:17,0:16:11.63:136,0,12	0/0:24,0:21:30.38:0,30,274	0/0:30,0:30:33.30:0,33,257	0/0:30,0:30:19.03:0,19,129	0/0:21,0:21:22.94:0,23,132	0/0:19,0:19:39.06:0,39,381	0/0:21,0:19:36.46:0,36,354	0/0:20,0:20:19.17:0,19,97	0/0:24,0:23:22.31:0,22,396	0/0:25,0:25:12.87:0,13,66	0/0:15,0:15:38.50:0,39,362
chr10	37597198	.	T	TTG	4445.13	PASS	AB=0.538;AC=18;AF=0.321;AN=56;BaseQRankSum=-9.292;DP=609;FS=0.000;HRun=0;HaplotypeScore=80.9805;InbreedingCoeff=0.8366;MQ=65.02;MQ0=12;MQRankSum=5.020;QD=19.24;ReadPosRankSum=5.627;VQSLOD=4.8196;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:23.85:0,24,158	1/1:0,8:8:15.03:211,15,0	0/0:25,0:9:15.01:0,15,153	0/0:22,0:11:14.05:0,14,131	0/0:29,0:28:53.49:0,53,378	0/0:14,0:13:29:0,29,173	0/0:16,0:16:5.40:0,5,25	1/1:4,17:21:50.54:526,51,0	0/0:22,0:22:32.85:0,33,283	0/0:20,0:19:49.73:0,50,288	0/0:16,0:16:8.25:0,8,27	0/0:19,0:19:48.07:0,48,467	1/1:4,23:28:34.93:437,35,0	1/1:1,18:19:21.06:280,21,0	0/0:29,0:29:18.93:0,19,115	0/0:23,0:23:11.05:0,11,180	0/0:22,0:22:44.99:0,45,508	0/0:15,0:14:24.58:0,25,157	1/1:5,15:17:24.22:489,24,0	1/1:4,26:31:77.86:862,78,0	1/1:4,28:33:33.81:447,34,0	1/1:2,19:23:53.43:643,53,0	0/0:19,0:19:45.02:0,45,438	0/0:21,0:19:44.46:0,44,415	0/1:2,15:19:14.60:305,0,15	0/0:25,0:24:67.31:0,67,612	0/1:5,22:28:0.43:246,0,0	0/0:15,0:15:38.98:0,39,380
chr10	37597199	.	T	TG	1829.32	PASS	AB=0.979;AC=16;AF=0.286;AN=56;BaseQRankSum=1.101;DP=609;FS=7.272;HRun=0;HaplotypeScore=79.0305;InbreedingCoeff=0.6920;MQ=64.17;MQ0=13;MQRankSum=4.260;QD=7.95;ReadPosRankSum=7.390;VQSLOD=2.5458;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:31.92:0,32,219	1/1:8,0:8:14.08:71,14,0	0/0:25,0:9:21.60:0,22,151	0/0:22,0:10:9.62:0,10,109	0/0:29,0:28:58.21:0,58,376	0/0:14,0:13:34.75:0,35,233	0/0:16,0:16:11.83:0,12,79	1/1:21,1:21:20.42:285,20,0	0/0:22,0:22:32.88:0,33,279	0/0:19,0:18:50.63:0,51,349	0/0:16,0:16:14.65:0,15,88	0/0:19,0:19:48.05:0,48,447	1/1:26,2:28:18.15:230,18,0	1/1:19,0:19:19.98:103,20,0	0/0:29,0:29:20.79:0,21,144	0/0:23,0:23:28.92:0,29,236	0/0:22,0:22:44.05:0,44,462	0/0:16,0:15:32.50:0,32,216	0/1:19,1:16:4.90:175,0,5	1/1:28,3:31:50.85:498,51,0	1/1:30,2:32:15.13:192,15,0	0/1:23,0:23:2.13:276,0,2	0/0:19,0:19:44.56:0,45,401	0/0:22,0:20:44.96:0,45,395	0/1:19,0:19:11.45:96,0,11	0/0:25,0:24:71.96:0,72,633	0/1:27,1:28:35.58:94,0,36	0/0:15,0:15:38.98:0,39,344
chr10	37599846	.	AC	A	225.89	PASS	AB=0.704;AC=7;AF=0.250;AN=28;BaseQRankSum=-0.345;DP=94;FS=0.000;HRun=7;HaplotypeScore=22.9397;InbreedingCoeff=0.0776;MQ=48.03;MQ0=22;MQRankSum=0.629;QD=9.04;ReadPosRankSum=1.764;VQSLOD=-0.5070;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:5,1:4:21.73:22,0,33	./.	./.	0/0:6,0:2:0:0,0,0	./.	1/1:1,1:2:3.01:31,3,0	0/1:3,9:10:23.21:215,0,23	0/0:6,0:3:3.01:0,3,38	./.	0/1:1,1:2:14.78:25,0,15	0/0:0,1:1:0:0,0,0	0/0:5,0:4:3.01:0,3,38	./.	./.	1/1:1,1:2:3.01:31,3,0	0/0:1,0:1:3.01:0,3,38	./.	0/0:5,0:5:8.97:0,9,73	0/0:5,0:3:3.01:0,3,38	./.	0/0:17,0:11:8.35:0,8,61	./.	./.	0/0:10,0:8:12:0,12,133	./.	./.	./.	./.
chr10	37600308	.	AC	A	6181.71	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=8.681;DP=509;FS=22.798;HRun=1;HaplotypeScore=54.4946;InbreedingCoeff=0.9680;MQ=90.33;MQ0=1;MQRankSum=-3.080;QD=37.46;ReadPosRankSum=1.407;VQSLOD=2.9284;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,26:25:72.24:1005,72,0	0/0:7,0:7:21.04:0,21,309	0/0:16,1:17:23.46:0,23,666	0/0:24,0:24:66.17:0,66,942	0/0:11,0:11:30.09:0,30,452	1/1:0,15:15:42.14:587,42,0	1/1:0,29:29:75.25:1048,75,0	0/0:21,0:21:60.20:0,60,954	0/0:19,0:19:51.17:0,51,815	1/1:0,18:18:54.18:754,54,0	1/1:0,7:7:15.05:210,15,0	0/0:20,0:20:60.07:0,60,895	0/0:20,0:20:60.19:0,60,932	0/0:19,0:19:57.19:0,57,907	1/1:0,23:23:63.18:859,63,0	0/0:12,0:12:36.12:0,36,573	0/0:35,0:35:99:0,105,1629	1/1:0,30:30:78.26:1091,78,0	0/0:12,0:12:36.11:0,36,553	0/0:10,0:10:30.09:0,30,456	0/0:40,0:40:99:0,120,1867	0/0:11,0:11:33.11:0,33,525	0/0:7,0:7:21.07:0,21,335	0/0:32,0:32:90.27:0,90,1383	0/0:15,0:15:42.14:0,42,667	1/1:0,14:14:42.14:585,42,0	0/0:12,0:12:33:0,33,469	1/1:0,3:3:3.01:42,3,0
chr10	37603979	.	AG	A	8193.75	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=7.916;DP=616;FS=10.303;HRun=1;HaplotypeScore=69.4022;InbreedingCoeff=0.9996;MQ=90.62;MQ0=0;MQRankSum=-2.914;QD=39.58;ReadPosRankSum=1.143;VQSLOD=4.9732;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,117,1835	1/1:0,8:8:24.08:336,24,0	0/0:23,0:23:63.18:0,63,955	0/0:27,0:26:64.49:0,64,981	0/0:17,0:17:51.16:0,51,780	0/0:25,0:25:75.26:0,75,1198	0/0:28,0:28:84.21:0,84,1241	1/1:0,31:31:90.23:1190,90,0	0/0:16,0:16:48.15:0,48,740	0/0:25,0:25:72.25:0,72,1149	0/0:14,0:14:42.14:0,42,658	0/0:24,0:24:72.25:0,72,1151	1/1:0,13:13:36.12:503,36,0	1/1:0,22:22:60.20:837,60,0	0/0:26,0:26:78.25:0,78,1223	0/0:18,0:18:54.16:0,54,836	0/0:34,0:34:99:0,102,1568	0/0:18,0:18:51.17:0,51,815	1/1:0,22:22:66.19:862,66,0	1/1:1,16:17:51.13:679,51,0	1/1:0,42:42:99:1678,120,0	1/1:0,20:20:60.11:811,60,0	0/0:10,0:10:30.09:0,30,451	0/0:34,0:34:96.28:0,96,1492	1/1:0,17:17:51.17:713,51,0	0/0:15,0:15:45.15:0,45,719	1/1:0,15:15:42.14:586,42,0	0/0:15,0:15:45.15:0,45,719
chr10	37604855	.	A	AC	11786.36	PASS	AB=1.000;AC=47;AF=0.839;AN=56;BaseQRankSum=-9.020;DP=528;FS=1.749;HRun=8;HaplotypeScore=53.0063;InbreedingCoeff=0.8698;MQ=74.40;MQ0=0;MQRankSum=-1.395;QD=25.35;ReadPosRankSum=2.658;VQSLOD=5.6480;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,23:30:60.65:693,61,0	1/1:0,9:9:24.07:277,24,0	0/1:11,0:11:5.36:5,0,105	0/0:9,0:9:14.96:0,15,130	1/1:3,23:26:66.20:762,66,0	1/1:6,14:20:39.12:449,39,0	1/1:7,16:23:11.49:388,11,0	1/1:5,22:27:63.12:691,63,0	1/1:6,27:33:26.21:747,26,0	1/1:4,18:22:51.15:588,51,0	1/1:2,13:16:35.94:395,36,0	0/0:7,0:7:21.01:0,21,192	1/1:1,16:17:48.14:552,48,0	1/1:1,13:14:36.11:415,36,0	1/1:2,21:24:54.16:622,54,0	1/1:1,14:15:17.67:457,18,0	1/1:1,20:21:60.18:692,60,0	1/1:1,18:19:51.15:584,51,0	1/1:2,9:11:27.08:312,27,0	1/1:6,20:26:54.16:623,54,0	1/1:5,14:19:33.10:381,33,0	1/1:2,14:16:36.11:415,36,0	0/0:27,0:27:66.03:0,66,603	0/0:20,0:20:50.98:0,51,459	1/1:2,17:19:42.12:484,42,0	1/1:1,21:22:35.72:665,36,0	1/1:5,16:22:42.10:483,42,0	1/1:0,3:3:9.03:104,9,0
chr10	37605200	.	A	AT	5873.61	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-2.632;DP=505;FS=1.609;HRun=4;HaplotypeScore=61.8751;InbreedingCoeff=0.9880;MQ=74.19;MQ0=0;MQRankSum=-2.156;QD=36.71;ReadPosRankSum=2.312;VQSLOD=5.0705;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,33:33:90.30:1229,90,0	0/0:4,0:4:12.03:0,12,136	0/0:17,0:17:43.91:0,44,459	0/0:8,0:8:13.93:0,14,149	0/0:25,0:25:60.16:0,60,672	1/1:1,17:18:45.15:614,45,0	1/1:0,13:13:39.13:533,39,0	0/0:29,0:29:78.21:0,78,877	0/0:16,0:16:48.14:0,48,543	1/1:2,20:22:63.18:828,63,0	1/1:0,8:8:18.06:246,18,0	0/0:23,0:23:66.17:0,66,737	0/0:15,0:15:45.13:0,45,510	0/0:20,0:20:54.14:0,54,603	1/1:1,18:19:48.16:653,48,0	0/0:22,0:22:63.17:0,63,700	0/0:21,0:20:63.16:0,63,703	1/1:1,15:16:45.15:615,45,0	0/0:25,0:25:72.19:0,72,802	0/0:13,0:13:39.11:0,39,440	0/0:16,0:16:42.08:0,42,453	0/0:17,0:17:48.10:0,48,525	0/0:11,0:11:33.09:0,33,374	0/0:10,0:10:27.04:0,27,281	0/0:22,0:22:63.18:0,63,714	1/1:0,24:24:72.20:950,72,0	0/0:31,0:31:84.22:0,84,942	1/1:2,5:7:15.05:205,15,0
chr10	37605360	.	CT	C	5944.85	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=13.147;DP=460;FS=4.655;HRun=1;HaplotypeScore=45.5086;InbreedingCoeff=0.9816;MQ=87.37;MQ0=0;MQRankSum=-2.563;QD=40.17;ReadPosRankSum=1.743;VQSLOD=5.2571;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,20:20:60.20:839,60,0	0/0:2,0:2:6.02:0,6,96	0/0:13,0:13:36.10:0,36,531	0/0:18,0:18:54.15:0,54,835	0/0:20,0:20:60.20:0,60,959	1/1:0,20:20:57.19:797,57,0	1/1:0,17:17:48.16:671,48,0	0/0:39,0:39:99:0,117,1850	0/0:14,0:14:42.13:0,42,649	1/1:0,6:6:18.06:249,18,0	1/1:0,13:13:36.12:503,36,0	0/0:13,0:13:39.08:0,39,595	0/0:13,0:13:39.13:0,39,623	0/0:15,0:15:45.15:0,45,720	1/1:0,14:14:39.13:538,39,0	0/0:11,0:11:33.11:0,33,528	0/0:25,0:25:75.26:0,75,1199	1/1:0,17:17:45.15:629,45,0	0/0:23,0:23:69.23:0,69,1082	0/0:14,0:14:42.14:0,42,668	0/0:27,0:27:81.26:0,81,1272	0/0:7,0:7:21.06:0,21,314	0/0:11,0:11:33.11:0,33,518	0/0:16,0:16:48.16:0,48,764	0/0:12,0:12:36.11:0,36,553	1/1:0,26:26:78.26:1090,78,0	0/0:19,0:19:57.19:0,57,911	1/1:0,15:15:45.15:629,45,0
chr10	37606301	.	AC	A	10681.05	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=6.346;DP=845;FS=4.326;HRun=1;HaplotypeScore=104.5185;InbreedingCoeff=0.9996;MQ=73.21;MQ0=0;MQRankSum=-0.300;QD=38.70;ReadPosRankSum=0.285;VQSLOD=4.7935;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,133,2100	1/1:0,10:10:30.10:420,30,0	0/0:26,0:26:78.09:0,78,1125	0/0:24,0:24:66.22:0,66,1033	0/0:38,0:38:99:0,114,1773	0/0:20,0:20:60.18:0,60,934	0/0:38,0:38:99:0,114,1795	1/1:0,36:36:99:1435,108,0	0/0:29,0:29:87.21:0,87,1350	0/0:41,0:41:99:0,120,1873	0/0:19,0:19:57.18:0,57,877	0/0:45,0:45:99:0,135,2155	1/1:0,28:28:69.21:965,69,0	1/1:1,25:26:75.25:1049,75,0	0/0:35,0:35:99:0,105,1631	0/0:57,0:57:99:0,172,2650	0/0:27,0:26:78.27:0,78,1240	0/0:29,0:29:87.26:0,87,1337	1/1:0,13:13:39.11:523,39,0	1/1:0,26:26:78.03:962,78,0	1/1:0,44:44:99:1720,123,0	1/1:0,37:37:99:1468,105,0	0/0:31,0:31:93.30:0,93,1461	0/0:26,0:26:78.23:0,78,1199	1/1:0,17:17:51.17:713,51,0	0/0:30,0:30:90.31:0,90,1437	1/1:0,39:39:99:1426,102,0	0/0:8,0:8:24.08:0,24,384
chr10	37608659	.	G	GA	9355.42	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-1.316;DP=568;FS=3.249;HRun=8;HaplotypeScore=79.1924;InbreedingCoeff=0.9847;MQ=67.07;MQ0=1;MQRankSum=-3.709;QD=20.74;ReadPosRankSum=1.265;VQSLOD=5.1910;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,30:34:78.23:900,78,0	1/1:1,0:10:25.57:130,26,0	0/0:16,0:16:30.47:0,30,270	0/0:14,0:15:26.83:0,27,244	0/0:27,0:27:59.99:0,60,539	1/1:2,18:20:26.69:561,27,0	1/1:1,11:12:27.08:310,27,0	1/1:9,2:37:80.18:450,80,0	0/0:13,0:13:32.99:0,33,297	1/1:2,21:23:63.19:727,63,0	1/1:3,21:24:57.17:658,57,0	1/1:2,24:26:75.22:863,75,0	1/1:5,1:21:48.15:242,48,0	1/1:6,0:15:22.68:114,23,0	1/1:4,15:19:39.12:450,39,0	0/0:24,0:24:57:0,57,517	0/0:22,0:22:51.01:0,51,467	1/1:1,12:13:33.10:381,33,0	1/1:9,0:21:45.30:232,45,0	1/1:9,0:31:68.62:364,69,0	1/1:1,0:3:8.69:63,9,0	1/1:0,0:10:28.52:149,29,0	1/1:8,21:29:35.72:656,36,0	1/1:0,15:15:39.12:450,39,0	1/1:5,0:26:56.82:289,57,0	1/1:5,25:30:75.22:865,75,0	1/1:3,0:23:51.13:259,51,0	1/1:0,7:7:21.06:242,21,0
chr10	37609513	.	G	GA	2460.48	PASS	AB=0.949;AC=29;AF=0.518;AN=56;BaseQRankSum=-4.931;DP=456;FS=4.756;HRun=12;HaplotypeScore=65.9803;InbreedingCoeff=0.4151;MQ=57.38;MQ0=10;MQRankSum=0.956;QD=7.62;ReadPosRankSum=-0.235;VQSLOD=2.3692;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,24:29:53.68:506,54,0	0/1:2,0:2:0:0,0,0	0/0:10,0:5:8.64:0,9,49	0/1:7,0:4:5.89:6,0,14	0/0:17,0:17:35.72:0,36,261	1/1:1,13:15:23.87:217,24,0	0/1:9,0:15:1.86:65,0,2	0/1:32,0:28:26.18:40,0,26	0/0:12,0:11:23.82:0,24,174	1/1:15,10:25:36.01:336,36,0	1/1:7,5:12:17.24:153,17,0	0/0:12,0:13:28.83:0,29,203	0/1:12,0:12:0.13:14,0,0	1/1:18,0:18:1.20:4,1,0	1/1:5,11:16:11.14:270,11,0	0/1:15,3:18:48.80:49,0,180	0/0:29,0:29:65.07:0,65,463	1/1:3,18:21:45.28:418,45,0	0/0:18,0:17:4.17:0,4,26	0/1:15,0:15:15.93:22,0,16	1/1:12,0:10:0.47:2,0,0	0/0:14,0:12:2.60:0,3,13	0/0:6,0:6:12.40:0,12,89	0/0:14,0:14:36:0,36,253	0/1:15,0:13:7.43:10,0,7	1/1:8,16:25:32:439,32,0	0/1:19,0:19:0.77:1,0,14	1/1:5,7:11:9.01:88,9,0
chr10	37610273	.	G	GCA	6119.08	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=-0.395;DP=603;FS=4.441;HRun=0;HaplotypeScore=116.5722;InbreedingCoeff=0.9567;MQ=58.12;MQ0=25;MQRankSum=1.939;QD=26.15;ReadPosRankSum=-0.393;VQSLOD=5.4201;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:59.83:0,60,750	1/1:6,0:6:15.05:217,15,0	0/0:36,0:6:8.17:0,8,49	0/1:30,0:2:0:0,0,0	0/0:21,0:21:52.40:0,52,692	0/0:18,0:18:30.07:0,30,360	0/0:24,0:24:39.11:0,39,516	1/1:11,17:27:51.16:763,51,0	0/0:24,0:24:37.06:0,37,482	0/0:21,0:21:60.18:0,60,777	0/0:26,0:26:33.37:0,33,395	0/0:19,0:19:30.14:0,30,435	1/1:20,0:20:33.36:734,33,0	1/1:25,1:26:70.22:802,70,0	0/0:20,0:20:44.60:0,45,515	0/0:15,0:15:29.77:0,30,426	0/0:21,0:20:39.85:0,40,463	0/0:20,0:20:36.11:0,36,465	1/1:18,0:18:45:618,45,0	1/1:15,0:15:36.42:504,36,0	1/1:28,1:27:62.26:747,62,0	1/1:26,0:26:62.63:777,63,0	0/0:12,0:12:11.88:0,12,111	0/0:21,0:19:37.31:0,37,380	1/1:15,1:16:41.02:437,41,0	0/0:26,0:25:65.82:0,66,823	1/1:20,0:20:58.94:521,59,0	0/0:7,0:7:21.07:0,21,282
chr10	37611264	.	AC	A	1729.46	PASS	AB=0.986;AC=47;AF=0.940;AN=50;BaseQRankSum=-1.938;DP=154;FS=1.432;HRun=2;HaplotypeScore=40.7359;InbreedingCoeff=0.1650;MQ=94.99;MQ0=0;MQRankSum=-4.372;QD=11.69;ReadPosRankSum=1.123;VQSLOD=2.0335;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:4:2.80:15,3,0	./.	0/1:22,1:15:18.70:19,0,204	0/1:15,0:8:0.12:0,0,25	1/1:1,7:8:20.96:236,21,0	1/1:1,0:1:2.84:14,3,0	1/1:10,0:10:23.42:146,23,0	1/1:1,6:7:17:102,17,0	1/1:0,5:5:15.05:186,15,0	1/1:1,5:6:2.73:12,3,0	0/1:3,0:3:0:0,0,0	1/1:3,2:5:9.02:98,9,0	1/1:10,0:10:25.38:122,25,0	1/1:6,0:6:5.68:28,6,0	1/1:5,0:5:8.44:39,8,0	1/1:2,3:5:15.03:163,15,0	1/1:2,3:5:12.02:137,12,0	1/1:6,0:6:11.79:75,12,0	1/1:1,0:1:2.80:13,3,0	./.	./.	1/1:1,0:1:2.84:14,3,0	1/1:1,0:1:2.96:19,3,0	1/1:0,5:5:12.04:149,12,0	1/1:5,0:5:14.61:99,15,0	1/1:4,0:4:5.75:32,6,0	1/1:4,0:4:11.57:66,12,0	1/1:3,0:3:5.91:44,6,0
chr10	37611280	.	AAAAT	A	4729.05	PASS	AB=1.000;AC=52;AF=0.963;AN=54;BaseQRankSum=5.292;DP=207;FS=2.232;HRun=0;HaplotypeScore=145.9764;InbreedingCoeff=-0.0035;MQ=92.15;MQ0=0;MQRankSum=-5.592;QD=22.85;ReadPosRankSum=4.228;VQSLOD=4.6373;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,9:9:25.80:258,26,0	1/1:0,5:5:15.04:163,15,0	0/1:20,0:14:6.84:7,0,296	0/1:18,0:14:44.28:44,0,192	1/1:0,6:6:5.88:140,6,0	1/1:0,12:12:35.46:371,35,0	1/1:0,8:8:23.14:210,23,0	1/1:0,7:7:21.07:272,21,0	1/1:0,8:8:24.06:257,24,0	1/1:0,2:2:6.02:80,6,0	1/1:0,10:10:25.22:202,25,0	1/1:0,2:2:6.01:63,6,0	1/1:0,4:4:3.29:69,3,0	1/1:0,10:10:6.88:163,7,0	1/1:0,10:10:30.07:332,30,0	1/1:0,3:3:9.02:97,9,0	1/1:0,4:4:12.04:144,12,0	1/1:0,6:6:17.89:199,18,0	1/1:0,2:2:5.69:51,6,0	1/1:0,10:10:17.82:139,18,0	1/1:0,4:4:11.52:111,12,0	1/1:0,10:10:26.74:195,27,0	./.	1/1:0,3:3:9.02:101,9,0	1/1:0,5:5:7.73:116,8,0	1/1:0,9:9:27.08:325,27,0	1/1:0,18:18:52.23:586,52,0	1/1:0,1:1:3.01:34,3,0
chr10	37612888	.	G	GA	2564.81	PASS	AB=0.767;AC=28;AF=0.500;AN=56;BaseQRankSum=0.573;DP=520;FS=14.086;HRun=8;HaplotypeScore=71.2481;InbreedingCoeff=0.7847;MQ=79.97;MQ0=4;MQRankSum=1.412;QD=11.55;ReadPosRankSum=-1.596;VQSLOD=0.9650;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:29:59.91:60,0,69	1/1:8,0:8:8.58:69,9,0	0/0:38,0:25:28.98:0,29,254	0/0:26,0:16:6.75:0,7,93	0/0:28,0:28:12.21:0,12,401	0/0:22,0:22:37.50:0,37,360	0/0:23,0:23:59.97:0,60,531	1/1:4,9:13:25.34:233,25,0	0/0:12,0:12:29.93:0,30,258	0/0:25,0:25:47.98:0,48,430	0/0:26,0:26:63.08:0,63,546	1/1:16,0:16:7.09:64,7,0	1/1:2,10:12:14.80:173,15,0	0/1:1,7:8:12.41:123,0,12	0/0:28,0:28:31.37:0,31,451	0/0:17,0:18:41.40:0,41,392	0/0:13,0:13:29.72:0,30,291	0/0:16,0:16:43.38:0,43,354	1/1:4,10:14:9.03:248,9,0	1/1:4,15:19:40.77:426,41,0	1/1:3,11:14:21.06:242,21,0	1/1:6,10:16:21.05:226,21,0	1/1:10,0:10:8.55:53,9,0	1/1:12,0:12:14.95:116,15,0	1/1:4,15:19:33.10:381,33,0	0/0:22,0:22:56.99:0,57,506	1/1:7,18:25:29.45:324,29,0	1/1:6,0:6:5.26:43,5,0
chr10	37612896	.	A	AAGGG	1093.16	PASS	AB=0.868;AC=12;AF=0.214;AN=56;BaseQRankSum=-0.410;DP=548;FS=3.844;HRun=0;HaplotypeScore=116.5737;InbreedingCoeff=0.4046;MQ=72.42;MQ0=5;MQRankSum=-0.403;QD=8.34;ReadPosRankSum=-3.807;VQSLOD=1.1453;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:29:45.94:0,46,279	0/1:0,0:7:0.65:67,0,1	0/0:33,0:19:46.61:0,47,501	0/0:23,0:13:20.34:0,20,194	0/0:25,0:31:74.80:0,75,1108	0/0:25,0:25:56.49:0,56,961	0/0:24,0:24:69.13:0,69,1147	0/1:17,0:17:96.21:96,0,120	0/0:16,0:16:44.77:0,45,627	0/0:25,0:25:63.12:0,63,1003	0/0:24,0:26:75.13:0,75,1194	1/1:1,3:15:12.88:209,13,0	0/0:12,0:12:8.62:0,9,49	0/0:13,0:13:15:0,15,180	0/0:29,0:30:61.33:0,61,1183	0/0:21,0:21:56.14:0,56,885	0/0:17,0:17:51.10:0,51,783	0/0:16,0:18:48.05:0,48,747	0/1:14,0:14:55.65:145,0,56	0/1:23,0:24:86.21:86,0,129	0/0:13,0:13:17.39:0,17,135	0/0:15,0:17:25.55:0,26,171	1/1:2,5:13:11.11:156,11,0	1/1:2,9:15:18.53:460,19,0	0/0:18,0:18:19.70:0,20,91	0/0:25,0:25:72.14:0,72,1070	0/1:20,0:20:12.98:19,0,13	0/1:4,0:6:20.68:21,0,56
chr10	37614749	.	CTGTT	C	9518.24	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=16.257;DP=712;FS=7.233;HRun=0;HaplotypeScore=119.8790;InbreedingCoeff=0.9994;MQ=65.27;MQ0=1;MQRankSum=-2.478;QD=43.46;ReadPosRankSum=0.998;VQSLOD=5.2751;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:54:99:0,160,3986	1/1:1,11:12:27.09:496,27,0	0/0:17,0:16:36.11:0,36,763	0/0:20,0:18:26.53:0,27,733	0/0:22,0:22:63.17:0,63,1582	0/0:21,0:21:57.17:0,57,1431	0/0:27,0:27:78.21:0,78,1765	1/1:3,29:32:87.21:1419,87,0	0/0:37,0:37:99:0,102,2532	0/0:26,0:26:78.25:0,78,1941	0/0:21,0:21:60.21:0,60,1554	0/0:30,0:30:81.28:0,81,2098	1/1:0,15:15:27.09:496,27,0	1/1:2,22:24:57.20:1038,57,0	0/0:37,0:37:99:0,108,2714	0/0:33,0:33:93.31:0,93,2326	0/0:39,0:39:99:0,108,2769	0/0:15,0:15:42.14:0,42,1043	1/1:3,20:23:60.08:997,60,0	1/1:0,19:19:57.19:1028,57,0	1/1:1,36:36:90.31:1629,90,0	1/1:2,21:23:63.17:1076,63,0	0/0:19,0:19:57.20:0,57,1450	0/0:36,0:36:99:0,99,2583	1/1:2,13:15:33.11:585,33,0	0/0:26,0:26:75.26:0,75,1889	1/1:3,16:19:42.14:754,42,0	0/0:12,0:12:33.11:0,33,864
chr10	37615146	.	TA	T	2590.88	PASS	AB=0.917;AC=27;AF=0.482;AN=56;BaseQRankSum=8.093;DP=528;FS=1.787;HRun=14;HaplotypeScore=85.2198;InbreedingCoeff=0.8543;MQ=66.68;MQ0=5;MQRankSum=0.639;QD=11.83;ReadPosRankSum=1.441;VQSLOD=3.6833;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,1:29:54.08:0,54,450	1/1:1,10:11:29.74:205,30,0	0/0:35,0:17:15.46:0,15,126	0/0:20,0:9:1.33:0,1,54	0/0:24,0:25:55.51:0,56,520	0/0:17,0:19:38.88:0,39,348	0/0:23,1:24:39.45:0,39,499	1/1:8,24:31:68.14:468,68,0	0/0:16,0:16:25.70:0,26,241	0/0:18,1:19:1.16:0,1,286	0/1:19,2:22:3.49:3,0,286	1/1:13,5:18:34.36:223,34,0	1/1:6,10:16:23.62:164,24,0	1/1:4,10:14:23.66:164,24,0	0/0:16,0:16:36.04:0,36,334	0/0:9,0:9:3.09:0,3,124	0/0:30,0:30:65.83:0,66,571	0/0:27,2:29:25.78:0,26,512	1/1:7,21:26:59.17:406,59,0	1/1:2,14:16:38.55:267,39,0	1/1:6,10:17:34.09:220,34,0	1/1:1,4:5:11.86:82,12,0	1/1:5,4:9:17.44:113,17,0	1/1:1,11:12:32.73:226,33,0	1/1:2,8:10:23.70:164,24,0	0/0:23,0:23:41.52:0,42,363	1/1:4,5:9:14.73:102,15,0	0/0:14,0:14:30.03:0,30,278
chr10	37615324	.	A	AC	1138.77	PASS	AB=1.000;AC=15;AF=0.288;AN=52;BaseQRankSum=-0.768;DP=392;FS=3.285;HRun=1;HaplotypeScore=60.0740;InbreedingCoeff=0.6352;MQ=62.19;MQ0=2;MQRankSum=-1.005;QD=8.90;ReadPosRankSum=-2.321;VQSLOD=0.3488;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:37.52:0,38,247	0/1:5,0:5:17.14:56,0,17	0/1:22,0:8:3.35:3,0,78	0/0:30,0:15:3.62:0,4,85	0/0:17,0:17:32.95:0,33,292	0/0:13,0:14:29.64:0,30,213	0/0:18,0:19:38.64:0,39,279	1/1:6,20:26:26.91:395,27,0	0/0:9,0:9:18.95:0,19,199	0/0:14,0:14:35.77:0,36,290	0/0:7,0:7:14.75:0,15,91	0/0:10,0:10:20.75:0,21,147	1/1:9,0:8:1.29:107,1,0	./.	0/0:14,0:14:29.52:0,30,207	0/0:15,0:15:34.67:0,35,268	0/0:25,0:23:60.92:0,61,459	0/0:26,0:26:65.21:0,65,465	1/1:24,0:23:25.78:342,26,0	0/1:14,0:14:8.10:127,0,8	1/1:5,0:5:8.75:64,9,0	./.	0/0:10,0:10:26.67:0,27,189	0/0:15,0:14:32.57:0,33,225	1/1:11,0:11:12.60:107,13,0	0/0:16,0:17:38.26:0,38,299	1/1:11,0:11:5.95:107,6,0	0/0:7,0:7:8.62:0,9,54
chr10	37615424	.	CG	C	2307.64	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=0.026;DP=342;FS=2.793;HRun=3;HaplotypeScore=40.1541;InbreedingCoeff=0.6954;MQ=43.34;MQ0=32;MQRankSum=-1.176;QD=10.83;ReadPosRankSum=1.015;VQSLOD=1.5828;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:23,3:21:31.39:208,31,0	1/1:2,1:2:3:26,3,0	0/0:26,0:4:2.97:0,3,26	0/0:34,2:3:5.19:0,5,27	0/0:18,0:17:20.87:0,21,175	1/1:9,0:8:14.71:105,15,0	1/1:9,0:7:14.15:86,14,0	1/1:9,2:7:11.96:96,12,0	0/0:5,0:4:9.01:0,9,83	1/1:2,0:2:2.82:21,3,0	1/1:7,0:6:11.98:102,12,0	1/1:16,1:17:35.88:303,36,0	1/1:2,5:6:11.95:91,12,0	1/1:7,0:7:17.17:127,17,0	1/1:9,0:7:17.65:161,18,0	0/0:13,0:13:25.09:0,25,208	0/0:19,0:13:26.78:0,27,245	1/1:9,0:6:5.98:48,6,0	1/1:17,2:17:37.94:308,38,0	1/1:11,1:12:20.89:161,21,0	1/1:4,0:2:2.99:24,3,0	1/1:1,1:2:2.99:24,3,0	1/1:12,3:14:29.81:234,30,0	1/1:5,1:6:11.57:85,12,0	1/1:7,2:6:11.94:92,12,0	1/1:15,0:15:25.85:157,26,0	1/1:12,3:13:2.82:19,3,0	0/0:10,0:3:1.25:0,1,3
chr10	37615426	.	GGAA	G	2087.06	PASS	AB=0.974;AC=36;AF=0.643;AN=56;BaseQRankSum=-2.890;DP=349;FS=3.856;HRun=0;HaplotypeScore=49.3378;InbreedingCoeff=0.2243;MQ=43.83;MQ0=33;MQRankSum=3.261;QD=8.81;ReadPosRankSum=0.772;VQSLOD=2.3546;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:20:18.17:77,0,18	1/1:2,2:3:1.45:44,1,0	0/1:30,0:6:7.61:8,0,38	0/0:39,0:3:8.74:0,9,66	0/0:21,0:20:8.16:0,8,209	0/1:8,0:8:44.12:55,0,44	0/1:7,0:6:6.86:74,0,7	0/1:10,1:8:15.74:117,0,16	0/0:6,0:5:11.95:0,12,128	1/1:2,0:2:0.11:1,0,0	1/1:6,0:6:11.98:101,12,0	1/1:16,0:17:11.61:217,12,0	1/1:7,0:6:11.99:122,12,0	1/1:8,0:8:17.94:145,18,0	0/1:9,0:7:4.44:141,0,4	0/0:13,0:13:32.98:0,33,353	0/0:24,0:17:35.89:0,36,440	1/1:7,0:4:5.98:48,6,0	1/1:12,5:17:6.09:381,6,0	1/1:8,1:9:20.92:179,21,0	1/1:4,0:2:2.99:24,3,0	1/1:2,0:2:3.01:36,3,0	0/1:13,0:13:45.16:209,0,45	1/1:6,1:7:7.40:86,7,0	1/1:8,0:5:11.90:112,12,0	0/1:14,0:16:67.12:67,0,149	1/1:6,1:10:2.62:19,3,0	0/0:9,0:3:7.72:0,8,50
chr10	37615446	.	AAG	A	521.42	PASS	AB=0.986;AC=27;AF=0.482;AN=56;BaseQRankSum=2.217;DP=468;FS=29.883;HRun=0;HaplotypeScore=81.9702;InbreedingCoeff=-0.5922;MQ=45.73;MQ0=22;MQRankSum=-0.127;QD=1.23;ReadPosRankSum=-0.515;VQSLOD=-0.1395;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:29:10.96:0,11,105	0/1:7,1:7:18.91:19,0,31	0/1:40,0:11:10.15:10,0,48	0/1:59,0:7:5.81:6,0,30	0/1:25,0:24:23.55:24,0,163	0/1:11,0:9:37.16:37,0,72	0/1:11,0:9:26.20:26,0,32	0/1:31,1:28:87.66:88,0,141	0/0:7,0:7:14.48:0,14,112	0/1:18,0:17:63.57:64,0,99	0/1:15,0:12:6.08:6,0,38	0/1:13,0:13:10.67:11,0,30	0/1:11,0:9:2.58:61,0,3	0/1:10,0:10:13.73:14,0,35	0/1:9,0:8:12.95:13,0,23	0/1:10,0:10:17.02:17,0,127	0/1:31,0:24:29.57:30,0,198	0/0:6,0:4:3.84:0,4,21	0/1:16,1:15:55.34:55,0,68	0/1:11,1:12:14.65:15,0,25	0/1:6,0:4:2.01:15,0,2	0/1:3,0:3:7.74:8,0,18	0/1:11,0:10:45.38:45,0,116	1/1:12,0:10:4.34:14,4,0	1/1:9,1:9:1.72:34,2,0	0/1:27,0:27:36.24:36,0,227	0/1:16,1:15:6.82:7,0,37	0/1:5,0:4:16.80:17,0,51
chr10	37615447	.	AGAACC	A	1264.79	PASS	AB=0.965;AC=22;AF=0.393;AN=56;BaseQRankSum=-1.661;DP=462;FS=3.165;HRun=0;HaplotypeScore=93.3253;InbreedingCoeff=-0.4802;MQ=46.22;MQ0=22;MQRankSum=-1.894;QD=4.55;ReadPosRankSum=-2.968;VQSLOD=1.1399;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:28,2:27:26.08:26,0,129	0/1:8,0:7:64.77:65,0,121	0/0:40,0:11:4.25:0,4,58	0/0:58,1:7:2.87:0,3,72	0/0:23,0:23:21.13:0,21,498	0/1:11,0:9:99:104,0,110	0/1:8,2:8:68.07:68,0,68	0/1:31,0:28:82.79:83,0,306	0/0:7,0:8:18.06:0,18,353	0/1:18,1:18:99:140,0,280	0/1:14,1:12:73.18:73,0,106	0/1:13,0:13:45.33:45,0,274	1/1:7,1:9:12.88:121,13,0	0/1:10,0:10:38.95:39,0,98	0/1:7,1:8:5.25:47,0,5	0/0:8,0:10:16.88:0,17,354	0/0:31,0:24:17.93:0,18,755	0/1:6,0:4:7.90:8,0,59	0/1:16,1:15:99:104,0,122	0/0:11,1:12:0.10:0,0,98	0/1:6,0:4:11.64:47,0,12	0/1:3,0:3:27.51:28,0,46	0/1:9,0:10:75.12:75,0,297	0/1:12,0:10:11.03:11,0,18	0/1:10,0:9:0.66:31,0,1	0/1:25,0:25:99:229,0,323	0/1:17,0:15:26.44:26,0,107	0/1:4,0:3:49.95:50,0,103
chr10	37615455	.	A	AAAAAAAAAAAG	3607.23	PASS	AB=1.000;AC=38;AF=0.679;AN=56;BaseQRankSum=3.437;DP=470;FS=31.842;HRun=0;HaplotypeScore=147.2808;InbreedingCoeff=-0.0031;MQ=57.18;MQ0=17;MQRankSum=-3.805;QD=9.11;ReadPosRankSum=3.235;VQSLOD=1.0896;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:33,0:31:1.53:445,2,0	0/1:9,0:8:1.42:46,0,1	0/0:42,0:16:9.34:0,9,99	0/1:65,0:13:0.45:0,0,57	0/0:22,0:21:17.53:0,18,467	0/1:11,0:9:3.19:133,0,3	1/1:10,0:8:8.82:174,9,0	1/1:31,0:28:2.63:220,3,0	0/0:10,0:10:22.94:0,23,437	1/1:18,0:17:8.46:329,8,0	1/1:20,0:17:20.24:427,20,0	0/1:11,0:11:99:141,0,120	1/1:10,0:9:10.66:74,11,0	1/1:10,0:10:7.04:44,7,0	1/1:9,0:9:9.62:63,10,0	0/1:12,0:12:15.41:15,0,197	0/1:30,0:25:26.30:26,0,451	1/1:4,0:3:8.95:108,9,0	0/1:12,0:10:18.46:118,0,18	0/1:9,0:9:39.73:40,0,117	0/1:7,0:5:16.04:32,0,16	1/1:4,0:4:8.31:48,8,0	0/1:13,0:12:49.31:280,0,49	1/1:6,3:13:6.44:165,6,0	1/1:11,0:10:14.19:78,14,0	1/1:18,0:21:9.92:524,10,0	0/1:15,0:13:31.88:32,0,58	0/1:6,0:5:28.25:44,0,28
chr10	37615460	.	A	AAAAAGAAAAG	1706.90	PASS	AB=1.000;AC=18;AF=0.321;AN=56;BaseQRankSum=3.439;DP=460;FS=5.985;HRun=0;HaplotypeScore=156.6135;InbreedingCoeff=0.3212;MQ=59.79;MQ0=10;MQRankSum=-3.392;QD=9.75;ReadPosRankSum=4.478;VQSLOD=2.1690;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:34,0:32:78.60:180,0,79	0/0:8,0:7:8.41:0,8,71	0/0:36,0:17:11.33:0,11,195	0/0:54,0:12:10.98:0,11,126	0/0:21,0:21:18.06:0,18,486	0/1:12,0:10:15.43:15,0,57	1/1:8,0:8:5.93:98,6,0	0/0:30,0:28:11.27:0,11,114	0/0:11,0:11:21.06:0,21,488	0/1:19,0:18:15.72:69,0,16	0/1:20,0:18:89.26:167,0,89	1/1:13,0:13:12:249,12,0	0/0:7,0:6:1.64:0,2,5	0/0:9,0:9:2.91:0,3,28	0/0:10,0:10:12.01:0,12,71	0/0:12,0:12:14.99:0,15,279	0/0:29,0:25:20.91:0,21,471	1/1:3,0:3:3.01:65,3,0	0/0:11,0:11:8.53:0,9,90	0/0:10,0:10:11.89:0,12,191	0/0:7,0:7:1.15:0,1,49	0/1:4,0:4:0:0,0,0	1/1:7,6:16:12.43:401,12,0	1/1:14,0:13:8.97:266,9,0	1/1:9,0:9:1.82:5,2,0	0/1:22,0:22:67.58:355,0,68	0/0:13,0:12:12.34:0,12,140	0/0:14,0:13:2.87:0,3,132
chr10	37615461	.	A	AAAAAAAAAG	5653.18	PASS	AB=1.000;AC=41;AF=0.732;AN=56;BaseQRankSum=1.410;DP=457;FS=39.577;HRun=0;HaplotypeScore=137.5441;InbreedingCoeff=-0.0576;MQ=60.34;MQ0=10;MQRankSum=-5.531;QD=13.72;ReadPosRankSum=1.098;VQSLOD=2.6275;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:25:30.78:487,31,0	1/1:8,0:7:4.46:58,4,0	0/0:34,0:16:23.44:0,23,174	0/1:57,0:13:25.67:26,0,87	0/1:21,0:21:58.58:59,0,377	1/1:13,0:11:23.91:283,24,0	1/1:3,2:10:8.98:178,9,0	0/1:29,0:27:23.88:255,0,24	0/0:11,0:11:11.88:0,12,365	1/1:18,0:18:50.77:597,51,0	1/1:20,0:19:49.21:715,49,0	0/1:14,0:14:92.65:93,0,108	1/1:7,0:6:10.08:58,10,0	1/1:9,0:9:16.20:97,16,0	1/1:10,0:10:24.36:192,24,0	0/1:12,0:12:41.48:41,0,170	0/1:29,0:25:71.38:71,0,351	1/1:3,0:3:8.96:144,9,0	1/1:11,0:11:2.52:169,3,0	0/1:12,0:12:25.50:25,0,88	0/1:7,0:7:31.58:35,0,32	1/1:3,0:3:8.90:60,9,0	0/1:16,0:16:25.08:221,0,25	0/1:15,0:13:8.06:176,0,8	1/1:9,0:9:11.72:83,12,0	1/1:11,1:23:65.75:1136,66,0	0/1:13,0:12:25.90:52,0,26	1/1:14,0:13:38.21:342,38,0
chr10	37615988	.	C	CAA	6056.83	PASS	AB=0.732;AC=41;AF=0.732;AN=56;BaseQRankSum=2.293;DP=591;FS=2.057;HRun=13;HaplotypeScore=102.0240;InbreedingCoeff=0.5480;MQ=53.58;MQ0=11;MQRankSum=1.218;QD=12.57;ReadPosRankSum=-1.226;VQSLOD=3.7388;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:12,0:31:11.43:91,0,11	1/1:1,4:7:17.54:200,18,0	0/0:7,0:6:11.57:0,12,83	0/1:2,0:1:0:0,0,0	0/0:27,0:29:58.96:0,59,497	0/1:8,1:19:26.38:75,0,26	0/1:13,1:21:44.48:44,0,52	1/1:21,17:40:57.03:791,57,0	0/0:14,0:14:32.56:0,33,259	1/1:7,1:16:26.64:150,27,0	1/1:5,0:19:6.52:77,7,0	1/1:11,6:18:30.63:377,31,0	1/1:12,10:24:3.29:231,3,0	1/1:15,11:29:17.35:129,17,0	1/1:3,1:16:10.32:119,10,0	0/0:23,0:22:47.84:0,48,422	0/0:31,0:34:32.23:0,32,572	1/1:7,0:19:39.95:149,40,0	1/1:16,7:28:58.12:644,58,0	1/1:11,12:26:54.58:601,55,0	1/1:4,6:12:14.99:170,15,0	1/1:9,10:21:36.06:460,36,0	1/1:9,15:26:37.29:450,37,0	1/1:5,9:16:26.06:303,26,0	1/1:5,10:17:27.08:354,27,0	1/1:12,1:25:9.58:119,10,0	1/1:10,17:29:35.21:431,35,0	0/1:7,1:11:28.34:91,0,28
chr10	37616662	.	TG	T	7052.45	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=9.054;DP=696;FS=0.311;HRun=3;HaplotypeScore=70.4670;InbreedingCoeff=0.9254;MQ=76.64;MQ0=0;MQRankSum=0.984;QD=29.88;ReadPosRankSum=3.046;VQSLOD=4.4400;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,46:46:99:1562,126,0	0/0:11,0:11:33.07:0,33,434	0/0:19,0:19:45.01:0,45,542	0/1:14,0:14:11.24:11,0,208	0/0:31,0:31:78.18:0,78,1071	1/1:2,15:17:36.11:446,36,0	1/1:0,20:20:54.17:669,54,0	0/0:23,0:23:66.21:0,66,932	0/0:23,0:23:63.21:0,63,906	1/1:0,29:29:81.23:980,81,0	1/1:0,15:15:24.08:298,24,0	0/0:30,0:30:87.29:0,87,1251	0/0:21,0:21:54.18:0,54,777	0/0:23,0:23:69.22:0,69,969	1/1:1,35:36:93.29:1152,93,0	0/0:34,0:34:90.30:0,90,1294	0/0:34,0:34:99:0,99,1399	1/1:1,28:29:75.24:930,75,0	0/0:20,0:20:60.19:0,60,844	0/0:29,0:29:81.22:0,81,1115	0/0:44,0:44:99:0,126,1794	0/0:19,0:19:48.16:0,48,684	0/0:19,0:19:51.06:0,51,664	0/0:34,0:34:99:0,102,1424	0/0:21,0:21:60.09:0,60,779	1/1:0,18:18:48.15:595,48,0	0/0:25,0:24:69.23:0,69,992	1/1:0,12:12:33.10:409,33,0
chr10	37618366	.	C	CCCCAGAGCT	25469.96	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-12.848;DP=496;FS=174.811;HRun=0;HaplotypeScore=115.3449;InbreedingCoeff=0.9604;MQ=83.65;MQ0=0;MQRankSum=-16.121;QD=93.99;ReadPosRankSum=2.658;VQSLOD=1.2793;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,20:27:45.15:2133,45,0	1/1:2,5:8:18.06:908,18,0	0/0:28,0:28:81.20:0,81,2145	0/0:19,0:19:51.13:0,51,1571	0/0:25,0:25:66.23:0,66,2077	1/1:3,9:13:27.09:1284,27,0	1/1:3,8:14:21.07:1059,21,0	1/1:7,6:18:51.16:1965,51,0	0/0:21,0:21:63.20:0,63,1925	1/1:3,16:22:60.21:2613,60,0	1/1:1,5:9:15.05:756,15,0	0/0:40,0:40:99:0,114,3606	1/1:6,11:18:42.14:1996,42,0	1/1:2,3:9:12.04:526,12,0	1/1:2,14:18:45.15:2111,45,0	0/0:29,0:29:84.29:0,84,2619	0/0:29,0:29:84.26:0,84,2461	1/1:2,5:7:15.05:724,15,0	1/1:1,6:6:18.06:847,18,0	1/1:1,2:5:9.03:379,9,0	1/1:6,13:22:27.09:1276,27,0	1/1:4,10:15:27.09:1356,27,0	0/0:17,0:17:51.18:0,51,1614	0/0:17,0:17:51.18:0,51,1628	1/1:1,6:9:18.06:907,18,0	1/1:1,9:11:33.11:1657,33,0	1/1:6,14:22:57.20:2744,57,0	1/1:2,1:4:6.02:228,6,0
chr10	37618747	.	G	GT	3674.81	PASS	AB=0.597;AC=50;AF=0.893;AN=56;BaseQRankSum=2.543;DP=655;FS=5.581;HRun=15;HaplotypeScore=168.8813;InbreedingCoeff=0.3705;MQ=53.48;MQ0=11;MQRankSum=-1.613;QD=6.42;ReadPosRankSum=1.328;VQSLOD=0.9372;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:35,0:31:45.59:209,46,0	1/1:16,0:16:16.39:77,16,0	0/0:50,1:17:14.10:0,14,80	0/0:31,0:11:2.92:0,3,30	1/1:9,10:20:2.50:252,2,0	1/1:22,0:22:45.29:217,45,0	1/1:25,0:25:52.86:252,53,0	1/1:39,0:38:31.96:160,32,0	0/1:6,11:20:7.18:161,0,7	1/1:29,0:28:57.55:259,58,0	1/1:27,0:27:57:260,57,0	1/1:13,0:26:3.62:79,4,0	1/1:9,0:20:12.66:58,13,0	1/1:10,0:9:1.24:5,1,0	1/1:35,0:35:78.22:371,78,0	0/1:7,18:27:18.37:193,0,18	1/1:8,15:26:34.77:297,35,0	1/1:18,0:18:19.57:94,20,0	1/1:21,0:21:19.77:73,20,0	1/1:19,0:19:4.65:34,5,0	1/1:4,0:4:5.95:43,6,0	1/1:12,0:12:1.41:3,1,0	1/1:18,2:21:32.96:184,33,0	1/1:5,0:10:5.68:29,6,0	1/1:26,0:25:17.88:61,18,0	1/1:32,0:32:58.67:230,59,0	1/1:21,0:21:13.88:58,14,0	1/1:10,0:10:4.99:18,5,0
chr10	37618751	.	T	TG	3065.79	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=9.950;DP=630;FS=0.745;HRun=0;HaplotypeScore=135.4254;InbreedingCoeff=0.9367;MQ=52.36;MQ0=11;MQRankSum=-5.773;QD=13.69;ReadPosRankSum=7.318;VQSLOD=4.5892;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,12:29:7.94:198,8,0	0/0:16,0:16:37.56:0,38,236	0/0:51,0:17:38.31:0,38,370	0/0:31,0:10:11.24:0,11,111	0/0:22,0:22:31.93:0,32,280	1/1:1,22:23:50.39:364,50,0	1/1:9,16:25:31.94:369,32,0	0/0:35,0:34:89.79:0,90,671	0/0:18,0:18:25.90:0,26,178	1/1:10,18:27:66.33:553,66,0	1/1:9,17:26:31.67:376,32,0	0/0:25,0:24:38.23:0,38,274	0/0:17,0:17:17.60:0,18,109	0/0:11,0:10:23.89:0,24,187	1/1:11,23:34:44.02:495,44,0	0/0:27,0:27:37.10:0,37,293	0/0:25,0:24:25.01:0,25,184	1/1:11,6:17:29.08:279,29,0	0/0:20,0:20:59.60:0,60,452	0/0:18,0:18:44.54:0,45,310	0/0:4,0:4:6.65:0,7,23	0/0:10,0:10:14.78:0,15,96	0/0:20,0:20:41.08:0,41,304	0/0:11,0:10:8.71:0,9,59	0/0:25,0:24:60.97:0,61,426	1/1:0,3:35:91.43:607,91,0	0/0:20,0:20:43.39:0,43,298	1/1:0,0:3:5.81:32,6,0
chr10	37618752	.	T	TTTTTTG	13582.70	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=1.807;DP=623;FS=14.503;HRun=0;HaplotypeScore=178.9162;InbreedingCoeff=0.2116;MQ=52.21;MQ0=11;MQRankSum=-9.771;QD=29.85;ReadPosRankSum=2.480;VQSLOD=3.9176;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:19,11:26:60.08:1231,60,0	0/1:16,0:16:32.61:252,0,33	0/0:51,0:17:27.68:0,28,269	0/1:31,0:10:0.26:0,0,118	0/0:22,0:22:46.44:0,46,641	1/1:10,13:23:54.17:1213,54,0	1/1:13,12:25:59.91:1368,60,0	0/1:34,0:33:74.86:462,0,75	0/0:18,0:18:41.77:0,42,492	1/1:16,11:27:71.49:1467,71,0	1/1:12,14:27:47.09:1552,47,0	0/1:25,0:24:12.47:437,0,12	0/1:17,0:17:0.88:200,0,1	0/0:11,0:10:5.05:0,5,67	1/1:16,18:35:69.60:2045,70,0	0/0:27,0:27:47.49:0,47,571	0/0:24,0:23:53.58:0,54,499	1/1:11,5:16:15.20:697,15,0	0/1:20,0:20:74.05:289,0,74	0/1:18,0:18:28.71:81,0,29	0/0:4,0:4:3.63:0,4,10	0/0:11,0:11:3.51:0,4,17	0/1:20,0:20:12.94:357,0,13	0/1:11,0:10:15.07:111,0,15	0/1:25,0:24:99:150,0,131	1/1:30,2:32:89.02:1437,89,0	0/1:20,0:20:92.94:129,0,93	1/1:2,0:2:6.02:106,6,0
chr10	37621044	.	TC	T	3988.36	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=6.210;DP=439;FS=0.400;HRun=7;HaplotypeScore=47.1003;InbreedingCoeff=0.9182;MQ=76.65;MQ0=0;MQRankSum=-2.122;QD=24.32;ReadPosRankSum=0.624;VQSLOD=3.5434;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,30:31:78.18:795,78,0	0/0:5,0:5:15.05:0,15,187	0/0:7,0:7:21.02:0,21,224	0/0:14,0:15:20.29:0,20,206	0/0:4,0:4:12.04:0,12,151	1/1:1,5:6:15.03:153,15,0	1/1:6,35:41:99:1009,99,0	0/0:18,0:18:27.09:0,27,340	0/0:19,0:19:54.17:0,54,678	1/1:2,8:10:24.05:244,24,0	1/1:1,2:3:3:31,3,0	0/0:18,0:18:51.15:0,51,628	0/0:14,0:14:33.10:0,33,403	0/0:13,0:13:36.11:0,36,441	1/1:1,10:11:27.04:275,27,0	0/0:4,0:4:12.04:0,12,151	0/0:26,0:26:69.22:0,69,868	1/1:5,30:35:84.19:856,84,0	0/0:7,0:7:12.50:0,12,139	0/0:3,0:3:6.02:0,6,75	0/0:66,0:66:99:0,177,2176	0/0:5,0:5:15.05:0,15,188	0/0:7,0:7:12.04:0,12,150	0/0:24,0:24:60.19:0,60,747	0/0:8,0:8:21.07:0,21,264	1/1:0,21:21:54.08:534,54,0	0/0:12,0:12:33.07:0,33,387	1/1:3,3:6:9.02:92,9,0
chr10	37622774	.	GAC	G	8634.02	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=12.563;DP=618;FS=2.667;HRun=0;HaplotypeScore=88.7643;InbreedingCoeff=0.9815;MQ=70.00;MQ0=1;MQRankSum=1.065;QD=37.70;ReadPosRankSum=-0.797;VQSLOD=6.4867;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:72.25:0,72,1313	1/1:0,12:12:30.10:430,30,0	0/0:7,0:7:6:0,6,189	0/0:9,0:9:24.08:0,24,418	0/0:34,0:34:96.31:0,96,1712	0/0:29,0:29:78.27:0,78,1429	0/0:20,0:20:48.16:0,48,880	1/1:2,27:29:81.26:1143,81,0	0/0:20,0:20:60.21:0,60,1099	0/0:22,0:22:63.21:0,63,1123	0/0:18,0:18:48.16:0,48,870	0/0:25,0:25:75.26:0,75,1375	1/1:1,22:24:47.62:765,48,0	1/1:0,20:20:54.18:773,54,0	0/0:33,0:33:90.31:0,90,1650	0/0:30,0:30:84.27:0,84,1502	0/0:21,0:21:63.22:0,63,1155	0/0:5,0:5:15.05:0,15,275	1/1:1,16:17:48.14:667,48,0	1/1:0,37:37:99:1504,105,0	1/1:2,9:11:27.09:387,27,0	1/1:0,26:26:75.25:1074,75,0	0/0:23,0:23:57.19:0,57,1027	0/0:21,0:20:60.21:0,60,1099	1/1:0,24:24:60.20:860,60,0	0/0:38,0:38:99:0,111,2035	1/1:0,28:28:72.24:1031,72,0	0/0:10,0:10:30.10:0,30,536
chr10	37623026	.	T	TG	5714.77	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-3.932;DP=522;FS=2.525;HRun=2;HaplotypeScore=63.6217;InbreedingCoeff=0.9337;MQ=64.18;MQ0=12;MQRankSum=-1.194;QD=17.80;ReadPosRankSum=-0.871;VQSLOD=4.6667;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:18:46.79:342,47,0	1/1:10,0:10:20.97:214,21,0	0/0:39,0:15:22.10:0,22,213	0/0:26,0:10:5.25:0,5,27	0/0:27,0:27:49.87:0,50,383	1/1:19,0:19:50.04:399,50,0	1/1:13,0:13:2.48:191,2,0	1/1:36,2:37:72.25:629,72,0	0/0:14,0:14:21.88:0,22,183	1/1:24,0:24:55.70:457,56,0	1/1:23,0:23:57.60:451,58,0	0/0:22,0:21:47.87:0,48,392	1/1:13,0:12:26.98:241,27,0	1/1:13,0:13:23.88:185,24,0	1/1:23,0:23:49:378,49,0	0/0:21,0:21:50.15:0,50,416	0/0:25,0:24:59.36:0,59,445	1/1:7,0:7:20.88:162,21,0	1/1:22,0:22:31.72:361,32,0	1/1:18,1:19:44.78:398,45,0	1/1:6,0:6:11.98:99,12,0	1/1:11,1:11:26.56:198,27,0	0/0:13,0:12:28.69:0,29,231	0/0:14,0:14:23.96:0,24,196	1/1:11,0:10:20.49:166,20,0	1/1:17,0:17:44.38:361,44,0	1/1:27,1:26:26.84:419,27,0	1/1:4,0:3:8.94:65,9,0
chr10	37623456	.	C	CTAGGCTG	14677.01	PASS	AB=0.969;AC=15;AF=0.268;AN=56;BaseQRankSum=-8.533;DP=743;FS=3.648;HRun=0;HaplotypeScore=157.6692;InbreedingCoeff=0.9080;MQ=77.97;MQ0=0;MQRankSum=-16.255;QD=67.02;ReadPosRankSum=-0.531;VQSLOD=5.0913;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:11,15:27:60.21:2231,60,0	0/0:12,0:12:30.10:0,30,749	0/0:20,0:20:48.16:0,48,1157	0/0:18,0:18:45.15:0,45,1023	0/0:32,0:32:78.25:0,78,1847	1/1:13,23:36:93.32:3367,93,0	1/1:9,8:18:36.12:1287,36,0	0/0:31,0:31:72.22:0,72,1606	0/0:26,0:26:75.26:0,75,1858	1/1:9,18:30:75.26:2445,75,0	1/1:10,7:17:21.07:811,21,0	0/0:27,0:27:66.23:0,66,1648	0/0:39,0:39:99:0,102,2493	0/0:34,0:34:84.29:0,84,2081	1/1:8,25:37:72.25:2752,72,0	0/0:34,0:34:42.80:0,43,2161	0/0:39,0:39:96.21:0,96,2241	1/1:8,12:21:45.15:1748,45,0	0/0:20,0:20:48.16:0,48,1146	0/0:38,0:37:93.28:0,93,2261	0/0:30,0:30:81.28:0,81,1951	0/0:23,0:23:63.22:0,63,1548	0/0:23,0:23:51.15:0,51,1136	0/0:16,0:16:42.13:0,42,998	0/0:18,0:18:45.15:0,45,1096	0/1:30,1:31:35.42:35,0,1862	0/0:30,0:30:69.24:0,69,1666	0/0:14,0:14:30.09:0,30,698
chr10	37625085	.	G	GTTT	1142.12	PASS	AB=0.793;AC=5;AF=0.089;AN=56;BaseQRankSum=9.170;DP=729;FS=5.395;HRun=2;HaplotypeScore=137.5815;InbreedingCoeff=0.1304;MQ=61.51;MQ0=4;MQRankSum=-8.564;QD=13.13;ReadPosRankSum=1.153;VQSLOD=0.5849;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:56.54:0,57,1521	0/0:11,0:11:32.95:0,33,455	0/0:28,0:24:69.20:0,69,1172	0/0:34,0:31:90.29:0,90,1504	0/0:41,0:41:99:0,123,2179	0/0:25,0:25:75.26:0,75,1389	0/0:17,0:17:51.16:0,51,902	0/0:36,0:36:84.82:0,85,1561	0/0:21,0:21:60.20:0,60,1088	0/0:28,0:27:81.26:0,81,1447	0/0:24,0:24:72.23:0,72,1283	0/1:22,13:35:21.10:826,0,21	0/0:32,0:32:70.25:0,70,710	0/0:25,0:25:55.32:0,55,627	0/0:40,0:40:99:0,117,2115	0/0:25,0:25:75.23:0,75,1335	0/0:26,0:26:78.21:0,78,1376	0/0:13,0:13:36.12:0,36,655	0/0:28,0:24:72.13:0,72,1118	0/0:32,0:32:89.46:0,89,925	0/0:18,0:18:39.71:0,40,508	0/0:25,0:25:66.59:0,67,827	0/1:17,6:23:95.14:237,0,95	0/1:15,3:18:99:178,0,115	0/0:30,0:30:65.87:0,66,880	0/0:23,0:23:11.01:0,11,440	0/0:30,0:30:62.88:0,63,851	1/1:11,0:11:0.89:2,1,0
chr10	37625089	.	G	GGTTGGTTT	4788.91	PASS	AB=0.729;AC=17;AF=0.304;AN=56;BaseQRankSum=9.341;DP=764;FS=1.753;HRun=0;HaplotypeScore=205.9583;InbreedingCoeff=-0.1225;MQ=61.38;MQ0=4;MQRankSum=-2.012;QD=11.91;ReadPosRankSum=3.581;VQSLOD=3.4734;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:82.10:0,82,1544	0/1:4,0:11:80.05:80,0,101	0/0:31,0:27:72:0,72,753	0/0:37,0:34:50.01:0,50,867	0/0:39,0:39:99:0,114,2515	0/0:26,0:26:77.97:0,78,1441	0/0:20,0:20:57.08:0,57,1050	0/1:37,0:37:99:352,0,329	0/0:22,0:22:60.22:0,60,1120	0/0:27,0:26:69.20:0,69,1608	0/0:25,0:25:72.12:0,72,1220	0/1:37,0:38:85.31:488,0,85	0/1:7,0:32:92:307,0,92	0/1:7,0:26:99:230,0,117	0/0:40,0:40:99:0,114,2358	0/0:26,0:26:75.12:0,75,1381	0/0:26,0:26:62.52:0,63,1399	0/0:13,0:13:32.98:0,33,680	0/1:19,0:26:99:213,0,282	0/1:8,0:34:78.55:406,0,79	0/1:8,0:18:99:140,0,140	0/1:6,0:27:99:295,0,125	0/1:22,0:22:99:143,0,116	0/1:20,0:20:88.41:88,0,155	0/1:13,0:33:99:187,0,281	1/1:0,24:28:76.26:1452,76,0	0/1:12,0:30:99:148,0,205	1/1:1,10:16:6.02:259,6,0
chr10	37625731	.	GGTGCATGTAGA	G	23373.47	PASS	AB=1.000;AC=31;AF=0.554;AN=56;BaseQRankSum=11.959;DP=597;FS=7.959;HRun=0;HaplotypeScore=224.9219;InbreedingCoeff=0.4929;MQ=86.79;MQ0=0;MQRankSum=-15.043;QD=62.00;ReadPosRankSum=4.452;VQSLOD=3.1193;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:32,0:32:99:1314,0,111	1/1:0,10:10:27.05:905,27,0	0/0:23,0:23:63.17:0,63,2219	0/0:28,0:28:72.57:0,73,2782	0/0:17,0:17:51.08:0,51,2557	0/1:19,0:19:96.85:615,0,97	0/1:16,0:16:99:530,0,125	1/1:0,28:28:84.06:2027,84,0	0/0:25,0:25:75.15:0,75,3154	0/1:19,0:19:26.80:1149,0,27	0/1:24,0:24:16.78:1341,0,17	0/0:2,0:30:77.70:0,78,2437	1/1:1,24:25:54.10:1900,54,0	1/1:0,23:23:63.22:2331,63,0	0/1:32,0:32:21.25:1809,0,21	0/0:36,0:36:99:0,108,5647	0/0:22,0:22:66.12:0,66,3123	0/1:8,0:8:47.87:225,0,48	1/1:0,21:21:59.70:906,60,0	1/1:0,16:16:44.09:1303,44,0	1/1:0,19:19:17.79:629,18,0	1/1:0,11:11:18.06:665,18,0	0/0:0,0:15:38.29:0,38,1240	0/0:1,0:24:66.18:0,66,2162	1/1:0,18:18:36.08:1162,36,0	1/1:0,21:21:63.03:1873,63,0	1/1:0,25:25:60.06:2021,60,0	1/1:0,10:10:18.06:668,18,0
chr10	37625732	.	GTGCATGTAGAT	G	21736.15	PASS	AB=1.000;AC=37;AF=0.661;AN=56;BaseQRankSum=11.646;DP=595;FS=5.637;HRun=0;HaplotypeScore=231.3875;InbreedingCoeff=0.9329;MQ=86.92;MQ0=0;MQRankSum=-16.336;QD=57.66;ReadPosRankSum=2.432;VQSLOD=4.1341;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,21:32:51.18:1706,51,0	1/1:10,0:10:24.08:734,24,0	0/0:23,0:23:45.15:0,45,1962	0/0:28,0:28:59.56:0,60,2458	0/0:17,0:17:45.15:0,45,2496	1/1:6,13:19:24.08:803,24,0	1/1:8,8:16:21.07:703,21,0	1/1:28,0:28:52.90:1397,53,0	0/0:25,0:25:54.19:0,54,2719	1/1:4,15:19:45.15:1505,45,0	1/1:5,19:24:51.18:1706,51,0	0/0:28,0:28:72.23:0,72,2405	1/1:25,0:25:51.18:1559,51,0	1/1:23,0:23:63.22:1937,63,0	1/1:4,28:32:69.71:2309,70,0	0/0:36,0:36:96.33:0,96,5204	0/0:23,0:23:57.20:0,57,2975	1/1:2,6:8:9.03:301,9,0	0/1:21,0:21:2.93:433,0,3	1/1:16,0:16:33.11:1014,33,0	1/1:19,0:19:17.63:516,18,0	1/1:11,0:11:18.06:557,18,0	0/0:15,0:15:35.79:0,36,1231	0/0:23,0:23:63.22:0,63,2136	1/1:18,0:18:33.07:931,33,0	1/1:21,0:21:48.16:1442,48,0	1/1:25,0:25:54.19:1639,54,0	1/1:10,0:10:18.06:545,18,0
chr10	37626002	.	A	AT	9319.23	PASS	AB=0.571;AC=37;AF=0.661;AN=56;BaseQRankSum=-7.605;DP=549;FS=8.116;HRun=10;HaplotypeScore=61.7209;InbreedingCoeff=0.9228;MQ=66.50;MQ0=0;MQRankSum=-1.219;QD=23.83;ReadPosRankSum=-0.114;VQSLOD=5.3677;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,25:31:66.13:691,66,0	1/1:1,13:14:42.11:447,42,0	0/0:8,0:8:7.80:0,8,54	0/0:7,0:6:14.80:0,15,121	0/0:23,0:24:61.95:0,62,498	1/1:6,24:30:44.49:667,44,0	1/1:4,10:14:16.62:283,17,0	1/1:5,22:27:44.50:669,45,0	0/0:17,1:18:12.94:0,13,309	1/1:4,14:18:41.97:431,42,0	1/1:5,18:23:48.12:512,48,0	0/0:28,0:28:71.91:0,72,591	1/1:1,18:19:51.13:543,51,0	1/1:5,13:18:17.46:391,17,0	1/1:1,19:20:51.13:543,51,0	0/0:21,0:21:56.89:0,57,465	0/0:24,0:24:62.92:0,63,517	1/1:1,9:10:21.05:224,21,0	1/1:1,18:19:54.14:576,54,0	0/1:8,24:32:1.77:588,0,2	1/1:2,7:9:18.05:192,18,0	1/1:0,14:14:39.10:416,39,0	0/0:20,0:20:56.92:0,57,468	0/0:8,0:8:23.95:0,24,193	1/1:2,15:17:11.44:326,11,0	1/1:4,20:25:41.35:629,41,0	1/1:3,29:32:53.55:775,54,0	1/1:4,15:19:39.98:418,40,0
chr10	37626609	.	T	TAA	1619.42	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-8.313;DP=565;FS=3.032;HRun=8;HaplotypeScore=69.4593;InbreedingCoeff=0.9743;MQ=67.59;MQ0=1;MQRankSum=1.454;QD=34.46;ReadPosRankSum=2.741;VQSLOD=3.8494;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:57.07:0,57,600	0/0:12,0:12:33.08:0,33,368	0/0:6,0:5:10.24:0,10,86	0/0:8,0:8:13.56:0,14,83	0/0:25,0:25:66.15:0,66,735	0/0:28,0:28:72.15:0,72,793	0/0:21,0:21:57.11:0,57,616	0/0:26,0:26:66.14:0,66,719	0/0:29,0:29:69.17:0,69,769	0/0:35,0:35:93.23:0,93,1029	0/0:23,0:23:48.12:0,48,535	1/1:2,22:23:54.18:857,54,0	0/0:23,0:23:66.16:0,66,726	0/0:14,0:14:42.11:0,42,468	0/0:18,0:19:42.08:0,42,527	0/0:32,0:31:84.20:0,84,927	0/0:30,0:30:81.21:0,81,901	0/0:14,0:14:39.10:0,39,435	0/0:18,0:18:48.11:0,48,520	0/0:18,0:18:42.10:0,42,468	0/0:19,0:19:48.12:0,48,535	0/0:7,0:7:21.04:0,21,225	1/1:0,11:11:27.09:429,27,0	1/1:1,11:12:29.88:476,30,0	0/0:25,0:25:72.14:0,72,802	0/0:25,0:25:66.17:0,66,733	0/0:25,0:25:63.12:0,63,693	0/0:16,0:16:39.06:0,39,414
chr10	37628525	.	GT	G	2272.32	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.247;DP=729;FS=1.610;HRun=2;HaplotypeScore=69.0333;InbreedingCoeff=0.9994;MQ=78.14;MQ0=0;MQRankSum=-0.447;QD=32.00;ReadPosRankSum=3.771;VQSLOD=3.5070;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,144,2117	0/0:10,0:10:30.09:0,30,432	0/0:25,0:25:75.25:0,75,1106	0/0:15,0:15:39.12:0,39,549	0/0:30,0:30:81.27:0,81,1205	0/0:42,0:42:99:0,123,1822	0/0:16,0:16:45.14:0,45,638	0/0:37,0:37:99:0,105,1537	0/0:33,0:33:99:0,99,1465	0/0:32,0:32:90.30:0,90,1325	0/0:26,0:26:78.25:0,78,1147	1/1:1,25:26:72.23:935,72,0	0/0:19,0:19:57.18:0,57,834	0/0:22,0:22:66.22:0,66,986	0/0:34,0:34:99:0,102,1508	0/0:33,0:33:96.33:0,96,1439	0/0:32,0:32:96.31:0,96,1418	0/0:19,0:18:54.18:0,54,803	0/0:21,0:21:63.20:0,63,926	0/0:25,0:25:75.24:0,75,1104	0/0:31,0:31:90.30:0,90,1349	0/0:15,0:15:45.15:0,45,674	1/1:0,23:23:54.12:701,54,0	1/1:0,22:22:60.20:779,60,0	0/0:17,0:17:51.16:0,51,745	0/0:34,0:34:99:0,99,1465	0/0:31,0:31:84.28:0,84,1255	0/0:9,0:9:27.09:0,27,405
chr10	37629652	.	T	TC	2706.76	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-1.743;DP=683;FS=4.474;HRun=2;HaplotypeScore=65.3579;InbreedingCoeff=0.9990;MQ=88.50;MQ0=0;MQRankSum=-3.009;QD=38.12;ReadPosRankSum=3.002;VQSLOD=4.4120;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,105,1300	0/0:9,0:9:24.08:0,24,297	0/0:29,0:29:65.76:0,66,760	0/0:23,0:23:56.55:0,57,662	0/0:30,0:30:87.25:0,87,1054	0/0:20,0:20:60.19:0,60,744	0/0:34,0:34:93.29:0,93,1152	0/0:21,0:21:63.20:0,63,781	0/0:23,0:23:69.22:0,69,855	0/0:21,0:21:60.19:0,60,744	0/0:20,0:20:54.17:0,54,669	1/1:2,33:35:93.31:1339,93,0	0/0:22,0:22:60.19:0,60,744	0/0:28,0:28:81.25:0,81,1004	0/0:37,0:37:99:0,105,1276	0/0:33,0:33:99:0,99,1201	0/0:28,0:28:78.23:0,78,953	0/0:15,0:15:42.13:0,42,521	0/0:22,0:22:66.20:0,66,806	0/0:28,0:28:81.21:0,81,970	0/0:43,0:43:99:0,123,1501	0/0:14,0:14:42.11:0,42,496	1/1:0,12:12:36.12:517,36,0	1/1:0,24:24:69.23:994,69,0	0/0:17,0:17:51.16:0,51,632	0/0:23,0:23:66.21:0,66,818	0/0:25,0:25:75.22:0,75,917	0/0:10,0:10:30.09:0,30,372
chr10	37630170	.	AAAACAAACAAAC	A	7411.70	PASS	AB=0.956;AC=27;AF=0.482;AN=56;BaseQRankSum=-0.326;DP=652;FS=1.228;HRun=0;HaplotypeScore=246.9015;InbreedingCoeff=0.1640;MQ=56.00;MQ0=2;MQRankSum=-1.550;QD=17.36;ReadPosRankSum=5.000;VQSLOD=2.9673;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:32,0:32:6.02:165,6,0	0/1:12,0:12:99:202,0,443	0/0:30,0:20:29.95:0,30,630	0/0:20,0:16:15.03:0,15,353	0/0:28,0:28:69.22:0,69,1931	1/1:23,0:23:21.07:589,21,0	1/1:16,0:16:13.49:222,13,0	1/1:14,29:43:84.06:1405,84,0	0/0:16,0:16:27.08:0,27,636	1/1:20,0:20:22.63:514,23,0	1/1:17,0:17:6.02:169,6,0	0/0:25,0:25:60.16:0,60,1894	0/1:25,0:25:98.26:98,0,1409	0/1:13,0:13:99:347,0,388	1/1:24,0:24:12.04:335,12,0	0/0:32,0:32:63.19:0,63,2234	0/0:25,0:25:56.68:0,57,1607	0/1:13,0:13:45:185,0,45	0/1:21,0:20:99:568,0,184	0/1:32,0:32:99:377,0,926	0/1:26,0:26:99:621,0,546	0/1:17,0:17:99:240,0,661	0/0:22,0:22:54.13:0,54,1326	0/0:27,0:27:63.11:0,63,2245	0/1:28,0:28:99:629,0,1150	0/1:6,0:33:99:134,0,188	0/1:27,0:27:99:555,0,625	1/1:4,0:4:8.77:58,9,0
chr10	37630184	.	AACAAACAAACAAACAAACAT	A	5898.45	PASS	AB=0.990;AC=21;AF=0.375;AN=56;BaseQRankSum=3.249;DP=691;FS=11.314;HRun=0;HaplotypeScore=353.1494;InbreedingCoeff=0.2973;MQ=54.66;MQ0=21;MQRankSum=0.874;QD=16.76;ReadPosRankSum=3.115;VQSLOD=1.7820;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:5,25:30:5.84:332,6,0	0/0:14,0:14:7.74:0,8,1407	0/0:45,0:17:42.10:0,42,1049	0/0:25,0:11:27:0,27,580	0/0:29,0:29:87.30:0,87,3565	1/1:0,25:25:21.07:1177,21,0	1/1:12,0:12:15.01:328,15,0	0/1:40,0:40:99:644,0,149	0/0:20,0:20:30.09:0,30,1176	1/1:2,19:21:48.05:1264,48,0	1/1:0,16:16:17.97:456,18,0	0/0:26,0:26:78.23:0,78,3889	0/0:30,0:30:55.42:0,55,3585	0/1:18,0:18:6.30:6,0,1951	1/1:1,22:23:12.04:671,12,0	0/0:31,0:31:87.29:0,87,4411	0/0:29,0:29:78.87:0,79,2990	0/1:9,1:10:91.25:287,0,91	0/1:23,0:20:99:179,0,1076	0/1:27,0:27:7.19:7,0,2619	0/1:29,0:29:99:175,0,2130	0/1:18,0:18:54.84:55,0,1873	0/0:24,0:23:69.23:0,69,2856	0/0:26,0:26:69.18:0,69,3871	0/1:30,0:29:94.02:94,0,3222	0/0:31,0:31:78.84:0,79,2488	0/1:30,0:30:99:223,0,2284	0/0:9,0:8:18.61:0,19,482
chr10	37630200	.	AACAT	A	2096.92	PASS	AB=1.000;AC=19;AF=0.365;AN=52;BaseQRankSum=1.644;DP=702;FS=3.503;HRun=0;HaplotypeScore=188.7357;InbreedingCoeff=0.7180;MQ=52.67;MQ0=23;MQRankSum=0.649;QD=8.52;ReadPosRankSum=1.409;VQSLOD=3.1461;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:26:14.98:56,0,15	0/0:13,0:13:32.85:0,33,430	./.	./.	1/1:12,22:34:56.77:584,57,0	1/1:25,0:25:21.06:241,21,0	1/1:13,0:13:14.97:127,15,0	0/0:68,0:63:68.26:0,68,468	1/1:3,15:19:9:115,9,0	1/1:20,0:20:12.01:312,12,0	0/1:17,0:17:4.10:128,0,4	0/0:26,0:27:48.08:0,48,792	0/0:28,0:28:54.08:0,54,954	0/0:19,0:19:41.79:0,42,527	1/1:22,0:22:12.03:136,12,0	0/0:26,0:26:45.04:0,45,651	1/1:24,4:28:39.03:453,39,0	1/1:8,0:8:1.62:71,2,0	0/0:26,0:21:29.68:0,30,331	0/0:28,0:28:53.90:0,54,795	0/0:31,0:31:47.97:0,48,672	0/0:20,0:20:35.78:0,36,581	0/0:21,0:20:32.89:0,33,530	0/0:24,0:24:45.09:0,45,868	0/0:29,0:29:55.95:0,56,946	0/1:34,0:34:66.46:66,0,146	0/0:28,0:28:42:0,42,589	0/0:14,0:13:23.87:0,24,180
chr10	37630650	.	TTTC	T	2099.50	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=14.901;DP=582;FS=3.584;HRun=0;HaplotypeScore=100.0646;InbreedingCoeff=0.9549;MQ=68.29;MQ0=1;MQRankSum=-0.908;QD=10.66;ReadPosRankSum=-3.277;VQSLOD=2.6575;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,105,2087	1/1:11,2:13:31.82:235,32,0	0/0:12,0:10:7.12:0,7,277	0/0:15,0:13:33.16:0,33,446	0/0:32,0:32:93.27:0,93,1794	0/0:33,0:33:99:0,99,1916	0/0:24,0:24:72.16:0,72,1396	1/1:37,1:38:71.45:608,71,0	0/0:20,0:20:60.19:0,60,1180	0/0:25,0:25:72.24:0,72,1389	0/0:20,0:20:60.19:0,60,1181	0/0:17,0:17:20.03:0,20,311	1/1:22,0:22:34.14:169,34,0	1/1:13,0:13:30.91:148,31,0	0/0:25,0:25:75.24:0,75,1475	0/0:27,0:27:75.21:0,75,1513	0/0:20,0:20:57.13:0,57,1023	0/0:10,0:10:27.04:0,27,507	1/1:13,0:13:31.08:168,31,0	1/1:29,0:29:52.92:340,53,0	1/1:12,0:12:19.43:96,19,0	1/1:16,1:17:37.31:222,37,0	0/0:14,0:14:38.94:0,39,310	0/0:11,0:11:1.86:0,2,180	1/1:20,0:20:36.93:176,37,0	0/0:35,0:35:99:0,105,1942	1/1:20,0:20:31.25:156,31,0	0/0:9,0:9:27.09:0,27,515
chr10	37630651	.	TTC	T	5937.78	PASS	AB=1.000;AC=24;AF=0.429;AN=56;BaseQRankSum=11.839;DP=584;FS=1.935;HRun=0;HaplotypeScore=75.9024;InbreedingCoeff=0.7287;MQ=68.26;MQ0=1;MQRankSum=-0.423;QD=23.75;ReadPosRankSum=-3.433;VQSLOD=4.5567;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,105,1671	1/1:2,11:13:33.03:411,33,0	0/1:12,0:10:4.59:5,0,205	0/0:15,0:13:26.74:0,27,343	0/0:32,0:32:93.26:0,93,1442	0/0:34,0:34:99:0,102,1561	0/0:26,0:26:78.15:0,78,1166	1/1:2,36:38:89.31:1259,89,0	0/0:20,0:20:60.19:0,60,948	0/0:26,0:26:75.23:0,75,1139	0/0:20,0:20:60.19:0,60,949	0/1:17,0:17:17.55:18,0,94	1/1:0,22:22:36.12:508,36,0	1/1:0,13:13:33.11:463,33,0	0/0:25,0:25:75.24:0,75,1183	0/0:27,0:27:75.20:0,75,1209	0/0:20,0:20:60.11:0,60,848	0/0:10,0:10:27.03:0,27,409	1/1:5,8:13:36.09:450,36,0	1/1:3,25:28:78.60:958,79,0	1/1:1,10:11:23.91:312,24,0	1/1:1,16:17:39.03:492,39,0	0/1:15,0:15:15.63:16,0,99	0/1:11,0:11:26.63:27,0,60	1/1:0,20:20:39.13:555,39,0	0/0:35,0:35:99:0,105,1578	1/1:0,20:20:33.11:465,33,0	0/0:9,0:9:27.07:0,27,402
chr10	37630652	.	TC	T	4025.64	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=15.224;DP=588;FS=1.490;HRun=1;HaplotypeScore=72.2508;InbreedingCoeff=0.9855;MQ=68.17;MQ0=1;MQRankSum=-0.057;QD=16.63;ReadPosRankSum=-3.663;VQSLOD=2.6666;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,105,1294	1/1:13,0:13:32.73:235,33,0	0/0:11,0:9:7:0,7,159	0/0:16,0:14:28.46:0,28,294	0/0:31,0:31:93.25:0,93,1118	0/0:34,0:34:99:0,102,1231	0/0:26,0:26:78.11:0,78,908	1/1:38,0:38:99:806,106,0	0/0:21,0:21:63.17:0,63,758	0/0:27,0:27:78.20:0,78,932	0/0:20,0:20:60.18:0,60,738	1/1:18,1:19:37.12:259,37,0	1/1:22,0:22:35.79:264,36,0	1/1:13,0:13:32.74:237,33,0	0/0:25,0:25:75.21:0,75,913	0/0:25,0:25:75.23:0,75,932	0/0:21,0:21:63.10:0,63,707	0/0:10,0:10:27.02:0,27,321	1/1:14,0:14:35.88:287,36,0	1/1:26,2:28:80.55:630,81,0	1/1:10,1:11:23.90:197,24,0	1/1:17,0:17:38.73:282,39,0	1/1:16,0:16:21.13:138,21,0	1/1:9,2:11:17.82:160,18,0	1/1:20,0:20:38.78:288,39,0	0/0:35,0:35:99:0,105,1248	1/1:20,0:20:32.81:243,33,0	0/0:9,0:9:27.05:0,27,311
chr10	37631090	.	AT	A	371.35	PASS	AB=0.944;AC=6;AF=0.107;AN=56;BaseQRankSum=1.573;DP=366;FS=0.000;HRun=10;HaplotypeScore=91.5522;InbreedingCoeff=0.5786;MQ=72.50;MQ0=2;MQRankSum=0.659;QD=6.88;ReadPosRankSum=0.704;VQSLOD=1.8771;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:45.12:0,45,498	0/0:4,0:4:12.03:0,12,133	0/0:22,0:12:16.89:0,17,116	0/1:23,0:16:11.78:12,0,105	0/0:21,0:21:54.08:0,54,580	0/0:9,0:9:21.02:0,21,219	0/1:7,1:8:4.98:5,0,178	0/0:28,0:28:62.93:0,63,644	0/0:10,0:10:27.07:0,27,299	0/0:18,0:18:45.12:0,45,491	0/0:14,0:14:42.07:0,42,448	0/0:7,0:7:18.04:0,18,193	0/0:11,0:11:24.02:0,24,252	0/0:6,0:6:6.02:0,6,66	0/0:7,0:8:15.41:0,15,178	0/0:14,0:14:33.08:0,33,358	0/0:17,0:17:42.11:0,42,464	0/0:3,0:3:6.01:0,6,64	0/0:14,0:14:27.05:0,27,284	0/0:18,0:18:42.05:0,42,449	0/0:5,0:5:9:0,9,90	0/0:13,0:13:30.07:0,30,324	0/0:13,0:13:32.88:0,33,296	0/0:8,0:7:21.06:0,21,232	0/0:19,0:19:45.12:0,45,493	1/1:3,12:15:32.16:296,32,0	0/0:10,0:10:18.01:0,18,185	1/1:1,7:8:23.03:188,23,0
chr10	37631108	.	TGG	T	2330.24	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=1.568;DP=367;FS=9.869;HRun=3;HaplotypeScore=100.0084;InbreedingCoeff=0.9175;MQ=73.51;MQ0=9;MQRankSum=-3.565;QD=20.09;ReadPosRankSum=-0.589;VQSLOD=0.4447;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:54.18:0,54,936	1/1:1,2:3:7.82:64,8,0	0/0:52,0:22:46.25:0,46,684	0/0:32,0:17:40.76:0,41,543	0/0:21,0:21:63.22:0,63,1193	0/0:8,0:8:18.06:0,18,318	0/0:8,0:8:18.06:0,18,299	1/1:14,1:16:28.32:362,28,0	0/0:12,0:12:33.11:0,33,628	0/0:14,0:14:42.14:0,42,714	0/0:19,0:19:51.17:0,51,910	1/1:2,0:8:20.15:165,20,0	1/1:6,2:8:17.38:194,17,0	1/1:2,0:2:5.95:44,6,0	0/0:7,0:7:21.06:0,21,303	0/0:11,0:10:30.09:0,30,522	0/0:15,0:15:42.13:0,42,757	0/0:4,0:3:6.02:0,6,91	1/1:5,6:10:26.46:274,26,0	1/1:5,4:10:25.73:243,26,0	1/1:1,0:1:1.82:5,2,0	1/1:0,12:10:27.55:242,28,0	1/1:2,1:10:23.91:196,24,0	1/1:4,0:8:20.93:202,21,0	1/1:7,6:14:31.40:396,31,0	0/0:18,0:18:7.57:0,8,780	1/1:2,10:11:16.74:163,17,0	0/0:8,0:8:20.54:0,21,351
chr10	37631134	.	G	GTTT	1642.08	PASS	AB=0.996;AC=30;AF=0.556;AN=54;BaseQRankSum=3.399;DP=398;FS=0.000;HRun=10;HaplotypeScore=112.2559;InbreedingCoeff=0.6033;MQ=45.07;MQ0=25;MQRankSum=-5.077;QD=7.17;ReadPosRankSum=-0.804;VQSLOD=-0.2327;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:21,1:23:31.44:246,31,0	1/1:3,0:3:0.94:2,1,0	0/1:37,0:9:3.60:16,0,4	0/0:37,0:6:3.99:0,4,22	0/0:25,0:26:43.16:0,43,504	0/1:12,0:12:15.96:42,0,16	1/1:8,0:8:10.23:44,10,0	0/0:6,0:4:2.74:0,3,12	0/0:11,0:11:23.93:0,24,287	1/1:15,4:16:25.59:347,26,0	1/1:18,3:22:31.65:419,32,0	1/1:7,0:8:19.31:124,19,0	1/1:7,0:7:4.16:17,4,0	0/1:5,0:5:1.76:5,0,2	1/1:12,0:11:13.54:69,14,0	0/0:19,0:18:29.46:0,29,317	0/0:19,0:18:20.87:0,21,314	1/1:6,0:5:9.91:77,10,0	0/0:14,0:8:5.19:0,5,18	0/1:11,0:10:0.10:1,0,0	./.	0/1:9,0:7:0:0,0,0	1/1:10,0:10:24.07:281,24,0	1/1:4,0:5:11.86:116,12,0	0/1:12,0:12:0:2,0,0	0/0:22,0:22:40.95:0,41,347	1/1:15,0:13:4.01:11,4,0	0/0:9,0:9:14.10:0,14,196
chr10	37631138	.	T	TTTTG	1260.73	PASS	AB=1.000;AC=12;AF=0.222;AN=54;BaseQRankSum=2.887;DP=392;FS=0.638;HRun=0;HaplotypeScore=124.5281;InbreedingCoeff=0.1912;MQ=42.53;MQ0=29;MQRankSum=-3.917;QD=10.68;ReadPosRankSum=3.384;VQSLOD=2.9656;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:21,0:21:84.14:94,0,84	0/0:3,0:3:0.89:0,1,2	0/0:39,0:8:8.31:0,8,74	0/0:35,0:5:8.87:0,9,112	0/0:26,0:26:59.29:0,59,892	0/1:12,0:12:44.46:44,0,68	0/1:7,0:7:16.39:16,0,31	0/0:5,0:3:3.01:0,3,32	0/0:11,0:11:29.99:0,30,472	0/1:19,0:16:40.98:41,0,42	0/1:25,0:23:63.99:64,0,125	1/1:7,2:9:2.39:281,2,0	0/0:7,0:7:3.50:0,3,8	0/0:5,0:5:5.74:0,6,33	0/0:12,0:11:13.69:0,14,59	0/0:20,0:19:32.97:0,33,522	0/0:20,0:19:35.73:0,36,503	0/1:7,0:5:29.50:41,0,30	0/0:14,0:8:11.55:0,12,64	0/0:10,0:9:3.23:0,3,8	./.	0/0:6,0:4:0:0,0,0	1/1:4,8:12:11.70:558,12,0	1/1:4,2:5:12.04:266,12,0	0/0:10,0:10:0.47:0,0,2	0/0:22,0:22:10.54:0,11,646	0/0:16,0:14:7.71:0,8,84	0/0:8,0:8:23.87:0,24,360
chr10	37631145	.	G	GT	675.39	PASS	AB=0.962;AC=37;AF=0.685;AN=54;BaseQRankSum=4.626;DP=374;FS=0.765;HRun=15;HaplotypeScore=96.2075;InbreedingCoeff=0.2344;MQ=37.43;MQ0=36;MQRankSum=-4.698;QD=2.60;ReadPosRankSum=-0.271;VQSLOD=0.1590;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:21,1:22:14.43:78,14,0	0/1:3,0:3:4.50:5,0,12	0/0:31,0:5:2.09:0,2,9	0/0:32,0:3:4.65:0,5,21	0/1:24,0:25:7.72:8,0,79	1/1:11,0:11:6.72:38,7,0	1/1:7,0:7:1.47:4,1,0	1/1:7,0:4:3:25,3,0	0/0:11,0:11:12.53:0,13,50	1/1:21,1:18:12.53:62,13,0	1/1:24,0:22:22.30:80,22,0	0/1:9,0:9:4.45:19,0,4	1/1:4,3:7:11.64:79,12,0	0/1:6,0:7:3.15:3,0,13	1/1:14,0:12:5.53:22,6,0	0/0:16,0:17:19.98:0,20,85	0/1:23,0:21:30.11:30,0,66	1/1:6,1:5:8.89:63,9,0	1/1:15,0:11:13.69:100,14,0	0/1:5,0:5:8.35:14,0,8	./.	1/1:2,0:2:2.99:23,3,0	1/1:10,2:12:2.10:62,2,0	1/1:7,0:5:5.34:18,5,0	0/1:6,0:6:11.38:19,0,11	0/0:19,0:19:0.80:0,1,11	1/1:11,0:12:12.44:74,12,0	1/1:9,0:8:1.25:3,1,0
chr10	37631164	.	CTT	C	874.84	PASS	AB=0.596;AC=15;AF=0.278;AN=54;BaseQRankSum=-3.672;DP=358;FS=28.019;HRun=13;HaplotypeScore=80.8164;InbreedingCoeff=0.6626;MQ=35.50;MQ0=23;MQRankSum=-3.402;QD=10.17;ReadPosRankSum=2.615;VQSLOD=0.3877;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:18:24.56:0,25,126	0/1:0,2:3:0.20:50,0,0	0/0:20,0:3:3:0,3,27	0/0:20,0:3:6.48:0,6,64	0/0:20,0:20:24.49:0,24,285	0/0:5,0:10:19.49:0,19,147	0/0:5,0:6:14.40:0,14,104	1/1:7,10:13:23.97:282,24,0	0/0:7,0:8:18.48:0,18,229	0/0:12,1:17:0.67:0,1,117	0/0:19,0:24:46.25:0,46,309	0/0:9,0:7:14.43:0,14,110	0/1:3,7:10:0.84:67,0,1	0/1:4,2:7:0.88:71,0,1	0/0:9,0:12:16.99:0,17,132	0/0:17,0:17:22.36:0,22,307	0/0:21,0:20:30.52:0,31,373	0/0:5,0:6:6.74:0,7,39	1/1:8,7:11:20.65:224,21,0	1/1:2,5:6:12:116,12,0	./.	1/1:1,4:5:2.98:29,3,0	0/0:15,0:14:19.64:0,20,177	0/0:10,0:7:7.42:0,7,61	1/1:2,5:7:5.58:57,6,0	0/0:16,0:20:44.65:0,45,306	1/1:6,8:13:6.49:147,6,0	0/0:6,0:5:10.45:0,10,44
chr10	37631599	.	T	TG	2503.96	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-10.929;DP=645;FS=0.000;HRun=3;HaplotypeScore=82.5617;InbreedingCoeff=0.9882;MQ=75.89;MQ0=1;MQRankSum=-0.373;QD=37.37;ReadPosRankSum=3.058;VQSLOD=3.8522;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,111,1332	0/0:7,0:7:11.99:0,12,144	0/0:25,0:24:60.14:0,60,690	0/0:25,0:17:48.11:0,48,552	0/0:24,0:24:66.20:0,66,790	0/0:18,0:18:50.37:0,50,582	0/0:15,0:15:45.14:0,45,540	0/0:35,0:35:99:0,99,1168	0/0:13,0:13:36.11:0,36,432	0/0:28,0:28:75.23:0,75,900	0/0:19,0:19:51.16:0,51,612	1/1:0,23:23:69.23:966,69,0	0/0:18,0:18:45.12:0,45,527	0/0:21,0:21:63.19:0,63,756	0/0:27,0:27:75.23:0,75,900	0/0:35,0:35:99:0,99,1188	0/0:33,0:33:84.73:0,85,1009	0/0:17,0:17:42.09:0,42,503	0/0:17,0:17:48.15:0,48,576	0/0:27,0:27:78.23:0,78,925	0/0:32,0:32:96.29:0,96,1151	0/0:16,0:16:42.13:0,42,503	1/1:0,20:20:51.17:714,51,0	1/1:0,24:24:69.23:966,69,0	0/0:21,0:21:60.18:0,60,718	0/0:28,0:28:72.20:0,72,845	0/0:28,0:28:75.22:0,75,886	0/0:8,0:8:24.07:0,24,288
chr10	37634085	.	TC	T	1188.65	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=7.097;DP=529;FS=14.394;HRun=2;HaplotypeScore=128.2678;InbreedingCoeff=0.9721;MQ=61.63;MQ0=1;MQRankSum=-5.328;QD=27.01;ReadPosRankSum=0.431;VQSLOD=2.0459;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:22:51.04:0,51,682	0/0:8,0:8:18.06:0,18,270	0/0:19,0:17:47.51:0,48,655	0/0:19,0:14:32.29:0,32,402	0/0:31,0:31:93.31:0,93,1391	0/0:16,0:16:30.10:0,30,447	0/0:12,0:12:30.06:0,30,422	0/0:36,0:36:99:0,108,1619	0/0:18,0:18:51.17:0,51,763	0/0:26,0:26:72.20:0,72,1054	0/0:23,0:23:63.21:0,63,942	1/1:2,20:22:60.19:770,60,0	0/0:12,0:12:30.10:0,30,449	0/0:12,0:12:23.97:0,24,333	0/0:34,0:34:87.29:0,87,1299	0/0:26,0:26:72.24:0,72,1079	0/0:19,0:19:51.17:0,51,764	0/0:8,0:8:21.07:0,21,314	0/0:16,0:16:42.13:0,42,611	0/0:18,0:18:31.14:0,31,590	0/0:21,0:21:60.20:0,60,896	0/0:10,0:10:30.10:0,30,444	1/1:1,15:16:35.01:439,35,0	1/1:0,6:6:9.03:117,9,0	0/0:18,0:18:42.14:0,42,629	0/0:30,0:29:84.28:0,84,1257	0/0:20,0:20:60.20:0,60,894	0/0:9,0:9:24.08:0,24,360
chr10	37634103	.	GT	G	1121.19	PASS	AB=0.764;AC=14;AF=0.250;AN=56;BaseQRankSum=9.283;DP=560;FS=10.109;HRun=6;HaplotypeScore=177.2560;InbreedingCoeff=0.1955;MQ=51.11;MQ0=7;MQRankSum=-10.894;QD=5.55;ReadPosRankSum=-0.475;VQSLOD=-0.3913;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:21:27.35:0,27,539	0/1:8,3:11:25.99:26,0,84	0/0:19,0:11:27.04:0,27,332	0/0:16,0:8:8.87:0,9,78	0/0:33,0:33:87.28:0,87,1137	0/0:13,0:13:35.67:0,36,410	0/0:11,0:11:8.17:0,8,288	0/0:31,2:32:44.80:0,45,399	0/0:23,0:23:60.17:0,60,758	0/0:23,0:23:51.43:0,51,650	0/0:20,0:19:30.43:0,30,583	1/1:5,10:15:35.55:308,36,0	0/1:9,9:17:41.64:102,0,42	0/1:13,4:17:28.77:29,0,127	0/0:32,0:32:53.86:0,54,822	0/0:27,0:27:75.23:0,75,966	0/0:26,0:26:44.66:0,45,607	0/0:13,0:11:18.63:0,19,241	0/1:16,5:21:37.24:37,0,201	0/1:21,10:31:99:127,0,147	0/0:13,0:13:5.29:0,5,111	0/1:11,3:13:17.47:17,0,124	1/1:0,14:14:37.78:334,38,0	1/1:0,4:4:7.83:63,8,0	0/1:18,12:30:99:146,0,195	0/0:27,0:26:72.21:0,72,896	0/1:16,9:26:98.84:99,0,204	0/0:5,0:4:0:0,0,0
chr10	37634115	.	TTG	T	2391.28	PASS	AB=0.859;AC=22;AF=0.407;AN=54;BaseQRankSum=12.812;DP=567;FS=10.557;HRun=0;HaplotypeScore=206.6071;InbreedingCoeff=-0.0798;MQ=42.96;MQ0=15;MQRankSum=-12.231;QD=6.87;ReadPosRankSum=5.029;VQSLOD=2.2734;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:23:7.73:0,8,239	0/1:8,5:13:19.61:177,0,20	0/0:18,0:6:9.45:0,9,132	0/0:16,0:6:4.16:0,4,74	0/0:36,0:36:99:0,105,1479	0/1:13,0:13:32.18:32,0,60	0/1:8,0:8:0.40:0,0,87	0/1:24,3:23:9.40:9,0,188	0/0:23,0:23:65.86:0,66,872	0/1:21,0:21:5.47:5,0,192	0/1:25,0:24:10.31:10,0,197	1/1:15,0:14:27.90:190,28,0	1/1:8,13:20:24.44:361,24,0	0/1:10,6:16:33.16:158,0,33	0/1:29,0:28:39.85:40,0,131	0/0:27,0:27:74.78:0,75,962	0/0:24,0:24:48.86:0,49,832	0/0:12,0:9:4.83:0,5,80	0/1:19,4:19:92.56:93,0,102	0/1:18,16:34:23.31:418,0,23	0/1:11,0:11:10.05:52,0,10	0/1:9,5:13:35.05:110,0,35	1/1:16,0:16:31.25:254,31,0	1/1:3,0:3:5.05:19,5,0	0/1:16,17:33:36.61:392,0,37	0/0:35,0:32:25.46:0,25,377	0/1:17,9:26:99:240,0,104	./.
chr10	37634117	.	GTTT	G	3887.31	PASS	AB=0.992;AC=27;AF=0.500;AN=54;BaseQRankSum=8.377;DP=561;FS=4.643;HRun=10;HaplotypeScore=212.9934;InbreedingCoeff=-0.1416;MQ=42.18;MQ0=16;MQRankSum=-9.000;QD=9.32;ReadPosRankSum=4.660;VQSLOD=-0.3170;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:22:75.80:76,0,94	0/1:13,0:13:61.86:145,0,62	0/0:17,0:5:9.81:0,10,79	0/0:15,0:7:11.85:0,12,85	0/0:35,0:36:96.30:0,96,1811	1/1:14,0:14:5.65:89,6,0	0/1:8,0:8:7.21:7,0,59	0/1:25,0:21:1.21:1,0,265	0/0:22,0:22:54.16:0,54,1001	0/1:21,0:21:31.67:118,0,32	0/1:25,0:24:26.73:107,0,27	1/1:9,7:15:20.62:296,21,0	1/1:20,0:19:8.49:396,8,0	0/1:15,0:15:53.50:182,0,54	0/1:29,0:28:40.45:169,0,40	0/0:25,0:26:63.07:0,63,1086	0/0:23,0:23:56.68:0,57,1072	0/1:12,0:9:6.56:7,0,33	0/1:24,0:20:40.44:168,0,40	0/1:33,2:35:92.94:540,0,93	0/1:10,0:10:17.87:18,0,20	1/1:12,0:11:3.93:178,4,0	1/1:4,13:17:14.25:370,14,0	1/1:1,2:3:2.99:24,3,0	0/1:32,1:33:24.11:512,0,24	0/1:31,0:29:58.12:119,0,58	0/1:28,0:28:88.69:367,0,89	./.
chr10	37634119	.	TTTTTTTTTG	T	4376.29	PASS	AB=1.000;AC=17;AF=0.315;AN=54;BaseQRankSum=1.239;DP=566;FS=1.810;HRun=0;HaplotypeScore=276.5227;InbreedingCoeff=0.3178;MQ=40.69;MQ0=18;MQRankSum=-5.382;QD=19.62;ReadPosRankSum=0.395;VQSLOD=3.8904;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:22:35.18:298,0,35	0/0:13,0:13:10.41:0,10,155	0/0:18,0:5:11.28:0,11,80	0/0:18,0:6:12:0,12,130	0/0:35,0:35:93.27:0,93,3244	1/1:14,1:15:26.71:429,27,0	0/1:8,0:8:27.11:100,0,27	0/0:26,0:21:22.39:0,22,132	0/0:22,0:22:51.15:0,51,1824	1/1:15,6:21:52.95:1053,53,0	1/1:23,2:24:43.74:713,44,0	0/1:16,0:15:43.49:43,0,93	0/0:20,0:19:5.18:0,5,263	0/0:15,0:15:16.17:0,16,206	1/1:30,0:29:60.97:836,61,0	0/0:28,0:28:69.20:0,69,2009	0/0:23,0:23:48.52:0,49,1968	0/1:10,0:8:66.30:66,0,89	0/0:25,0:21:9.26:0,9,140	0/0:36,0:36:67.92:0,68,536	0/1:10,0:10:10.02:10,0,89	0/1:12,0:11:21.57:22,0,96	1/1:18,0:18:4.03:201,4,0	0/0:4,0:3:2.68:0,3,11	0/0:31,0:31:64.39:0,64,449	0/1:32,0:29:28.15:605,0,28	0/0:27,0:27:54.53:0,55,424	./.
chr10	37634120	.	TTTTTTTTG	T	5746.15	PASS	AB=0.966;AC=23;AF=0.426;AN=54;BaseQRankSum=2.552;DP=563;FS=3.984;HRun=0;HaplotypeScore=259.3404;InbreedingCoeff=0.0117;MQ=40.38;MQ0=18;MQRankSum=-5.318;QD=16.01;ReadPosRankSum=0.089;VQSLOD=3.9265;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:17,8:22:8.69:594,0,9	0/1:13,0:13:38.69:39,0,69	0/0:18,0:5:9.91:0,10,112	0/0:16,0:5:11:0,11,90	0/0:34,0:34:93.26:0,93,2924	1/1:10,5:15:35.93:653,36,0	0/1:7,1:8:18.57:204,0,19	0/0:26,0:21:0.46:0,0,98	0/0:22,0:22:50.84:0,51,1657	1/1:21,0:21:51.26:750,51,0	1/1:20,4:23:56.88:928,57,0	0/1:16,0:15:47.69:49,0,48	0/1:20,0:19:21.30:21,0,117	0/1:15,0:15:11.40:11,0,110	1/1:14,15:28:63.21:1378,63,0	0/0:27,0:27:72.21:0,72,1890	0/0:22,0:22:57.19:0,57,1788	0/1:10,1:8:75.26:135,0,75	0/1:26,0:22:9.19:9,0,94	0/1:37,0:37:32.20:32,0,281	0/1:10,0:10:1.60:2,0,55	0/1:12,0:11:59.33:59,0,74	1/1:17,0:17:28.12:234,28,0	0/0:4,0:3:2.03:0,2,6	0/0:32,0:32:14.37:0,14,200	0/1:32,0:29:14.68:639,0,15	0/1:28,0:28:9.53:10,0,214	./.
chr10	37634121	.	TTTTTTTG	T	6448.30	PASS	AB=1.000;AC=30;AF=0.556;AN=54;BaseQRankSum=10.626;DP=568;FS=9.625;HRun=0;HaplotypeScore=247.4817;InbreedingCoeff=0.0876;MQ=40.24;MQ0=19;MQRankSum=-9.059;QD=15.28;ReadPosRankSum=3.405;VQSLOD=1.9877;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:24,1:22:7.99:438,8,0	1/1:12,0:12:5.33:145,5,0	0/0:18,0:4:9.36:0,9,96	0/0:17,0:5:11.20:0,11,73	0/0:35,0:35:96.25:0,96,2580	1/1:15,0:15:34.72:444,35,0	0/1:8,0:8:21.29:120,0,21	0/1:26,0:21:92.22:119,0,92	0/0:23,0:23:50.68:0,51,1441	1/1:23,0:23:32.67:659,33,0	1/1:25,0:24:54.50:722,55,0	0/1:16,0:15:17.82:124,0,18	0/1:20,0:19:13.18:125,0,13	0/1:15,0:15:28.57:162,0,29	1/1:29,0:28:62.28:938,62,0	0/0:28,0:28:75.22:0,75,1735	0/0:23,0:23:60.19:0,60,1571	0/1:10,0:7:64.77:106,0,65	0/1:26,0:22:18.73:147,0,19	0/1:37,0:37:48.07:280,0,48	0/1:10,0:10:42.83:43,0,44	0/1:11,0:10:28.18:96,0,28	1/1:17,0:17:43.63:352,44,0	0/1:4,0:3:0:0,0,0	1/1:32,0:32:12.78:279,13,0	1/1:26,7:30:2.36:962,2,0	0/1:28,0:28:90.56:186,0,91	./.
chr10	37634122	.	T	TG	331.15	PASS	AB=0.885;AC=6;AF=0.111;AN=54;BaseQRankSum=5.001;DP=564;FS=23.101;HRun=0;HaplotypeScore=211.1076;InbreedingCoeff=0.1857;MQ=40.04;MQ0=19;MQRankSum=-5.530;QD=4.60;ReadPosRankSum=-1.242;VQSLOD=1.6742;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:21:48.89:0,49,349	0/0:12,0:12:34.90:0,35,243	0/0:18,0:4:9.22:0,9,76	0/0:18,0:5:11.88:0,12,103	0/0:35,0:35:99:0,102,1342	0/0:14,0:15:41.18:0,41,279	0/0:8,0:8:23.66:0,24,159	0/1:22,5:22:99:122,0,224	0/0:22,0:22:60.63:0,61,773	0/0:23,0:23:45.73:0,46,265	0/0:23,1:23:46.68:0,47,323	0/1:12,4:15:8.06:157,0,8	0/0:20,0:19:43.75:0,44,266	0/0:15,0:15:33.11:0,33,223	0/0:29,0:28:72.89:0,73,464	0/0:28,0:28:81.15:0,81,985	0/0:23,0:23:63.17:0,63,827	0/0:10,0:7:13.46:0,13,80	0/0:23,0:19:23.58:0,24,235	0/0:37,1:38:76.62:0,77,530	0/1:9,0:9:4.62:5,0,96	0/0:12,0:11:20.33:0,20,156	0/1:15,2:17:26.28:146,0,26	1/1:3,0:2:2.84:14,3,0	0/0:32,0:32:47.69:0,48,433	0/0:32,0:30:82.75:0,83,680	0/0:28,0:28:71.82:0,72,505	./.
chr10	37634126	.	TTG	T	5035.65	PASS	AB=1.000;AC=40;AF=0.741;AN=54;BaseQRankSum=12.986;DP=563;FS=1.716;HRun=0;HaplotypeScore=203.8783;InbreedingCoeff=0.4250;MQ=39.72;MQ0=19;MQRankSum=-9.685;QD=11.07;ReadPosRankSum=2.463;VQSLOD=4.4728;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:20:22.79:277,23,0	1/1:12,1:13:8.09:159,8,0	0/1:18,0:4:10.82:18,0,11	0/1:18,0:5:2.39:2,0,40	0/0:35,0:35:98.43:0,98,1227	1/1:16,0:15:37.81:297,38,0	0/1:9,0:9:7.07:116,0,7	0/1:24,0:18:20.64:106,0,21	0/0:22,0:22:38.83:0,39,656	1/1:16,3:22:55.33:518,55,0	1/1:22,3:24:61.88:508,62,0	1/1:18,0:17:35.92:200,36,0	1/1:19,0:18:31.64:130,32,0	1/1:15,0:15:31.71:172,32,0	1/1:24,1:25:57.29:556,57,0	0/0:27,0:27:76.90:0,77,860	0/0:22,0:22:60.14:0,60,791	1/1:9,2:8:7.78:120,8,0	0/1:25,0:21:28.06:126,0,28	1/1:36,1:37:20.48:304,20,0	1/1:10,0:10:7.44:106,7,0	1/1:10,1:10:5.03:98,5,0	1/1:18,0:18:45.43:245,45,0	1/1:3,0:2:2.04:6,2,0	1/1:32,0:32:52.39:329,52,0	1/1:34,0:31:19.52:471,20,0	0/1:28,0:28:9.89:171,0,10	./.
chr10	37634127	.	TG	T	5363.28	PASS	AB=0.877;AC=40;AF=0.741;AN=54;BaseQRankSum=11.512;DP=552;FS=4.916;HRun=1;HaplotypeScore=191.6831;InbreedingCoeff=0.4410;MQ=39.78;MQ0=19;MQRankSum=-7.537;QD=12.08;ReadPosRankSum=0.266;VQSLOD=3.5743;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:22,2:21:29.44:338,29,0	1/1:9,4:13:11.46:184,11,0	0/1:17,1:4:16.51:17,0,21	0/1:16,1:5:2.62:3,0,36	0/0:34,0:34:94.30:0,94,932	1/1:14,1:14:41.58:318,42,0	1/1:6,1:8:3.54:110,4,0	0/1:16,6:16:9.10:157,0,9	0/0:23,0:23:28.88:0,29,520	1/1:23,0:23:57.90:453,58,0	1/1:18,2:22:62.58:478,63,0	1/1:15,0:14:19.91:185,20,0	1/1:15,4:18:17.65:138,18,0	1/1:11,3:14:24.23:225,24,0	1/1:23,1:24:62.16:505,62,0	0/0:27,0:27:73.63:0,74,671	0/0:22,0:22:60.09:0,60,611	1/1:10,2:9:7.13:129,7,0	0/1:21,3:20:32.02:162,0,32	1/1:29,8:37:22.97:397,23,0	1/1:6,3:9:7.68:137,8,0	0/1:9,2:10:1.13:106,0,1	1/1:18,0:18:44.42:248,44,0	1/1:3,0:2:1.25:3,1,0	1/1:24,8:32:26.84:349,27,0	1/1:32,1:30:37.25:491,37,0	0/1:23,5:28:34.47:230,0,34	./.
chr10	37634133	.	T	TG	378.02	PASS	AB=0.817;AC=3;AF=0.056;AN=54;BaseQRankSum=3.238;DP=546;FS=18.137;HRun=0;HaplotypeScore=217.1402;InbreedingCoeff=0.0691;MQ=40.00;MQ0=19;MQRankSum=-2.207;QD=7.88;ReadPosRankSum=-2.921;VQSLOD=1.6476;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:22:26.58:0,27,260	0/0:13,0:13:38.09:0,38,334	0/0:15,0:2:5.45:0,5,28	0/0:17,0:3:5.75:0,6,53	0/0:31,0:31:82.15:0,82,1156	0/0:19,0:18:50.81:0,51,379	0/0:6,0:6:10.81:0,11,80	0/0:21,0:15:33.93:0,34,247	0/0:21,0:21:52.25:0,52,734	0/0:22,0:22:34.06:0,34,291	0/0:23,0:22:58.78:0,59,358	0/1:10,6:15:28.60:182,0,29	0/0:20,0:19:44.12:0,44,449	0/0:14,0:14:37.63:0,38,290	0/0:25,0:24:44.73:0,45,296	0/0:25,0:25:69.21:0,69,922	0/0:22,0:22:60.15:0,60,798	0/0:12,0:9:16.53:0,17,120	0/0:24,0:20:53.68:0,54,538	0/0:39,0:39:85.98:0,86,956	0/1:9,1:10:17.29:17,0,65	0/0:12,0:11:28.36:0,28,286	0/1:17,5:22:26.19:277,0,26	0/0:2,1:2:0:0,0,0	0/0:31,0:31:72.68:0,73,638	0/0:31,0:28:21.53:0,22,314	0/0:26,0:26:74.79:0,75,781	./.
chr10	37634138	.	GTTGTTGTTGTTGTT	G	2491.93	PASS	AB=1.000;AC=7;AF=0.135;AN=52;BaseQRankSum=4.833;DP=523;FS=4.960;HRun=0;HaplotypeScore=324.0078;InbreedingCoeff=0.5108;MQ=40.47;MQ0=17;MQRankSum=-3.659;QD=31.54;ReadPosRankSum=-2.220;VQSLOD=1.9808;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:20:49.45:0,49,1123	0/0:13,0:13:33.97:0,34,1016	0/0:15,0:3:2.47:0,2,84	0/0:17,0:2:5.97:0,6,157	0/0:31,0:31:90.22:0,90,5604	0/0:19,0:18:47.53:0,48,1202	0/0:5,0:5:10.11:0,10,167	0/0:23,0:17:44.26:0,44,1322	0/0:17,0:17:51.17:0,51,3323	0/0:21,0:21:53.75:0,54,895	0/0:26,0:25:67.80:0,68,1338	1/1:7,1:8:24.08:730,24,0	0/0:21,0:20:46.69:0,47,1989	0/0:13,0:13:30.77:0,31,1068	0/0:25,0:24:61.65:0,62,1039	0/0:24,0:24:69.22:0,69,3891	0/0:21,0:21:57.20:0,57,3618	0/1:11,0:8:6.63:7,0,408	0/0:24,0:21:36.55:0,37,1973	0/0:37,0:37:50:0,50,3390	0/1:10,0:10:7.67:8,0,464	0/0:13,0:12:31.54:0,32,1213	1/1:9,9:18:54.19:1874,54,0	./.	0/0:28,0:28:58.52:0,59,2650	0/1:31,0:28:1.85:2,0,977	0/0:26,0:26:58.78:0,59,2637	./.
chr10	37634146	.	TG	T	880.96	PASS	AB=0.872;AC=13;AF=0.250;AN=52;BaseQRankSum=11.249;DP=528;FS=1.005;HRun=1;HaplotypeScore=198.9515;InbreedingCoeff=0.0662;MQ=41.63;MQ0=15;MQRankSum=-8.210;QD=4.26;ReadPosRankSum=-0.272;VQSLOD=-0.1986;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,1:17:24.80:0,25,448	0/1:11,3:14:99:109,0,270	0/0:11,0:4:9.03:0,9,123	0/0:16,0:3:5.85:0,6,61	0/0:31,0:31:90.28:0,90,1381	0/0:18,0:17:23.15:0,23,522	0/1:7,0:7:4.90:5,0,70	0/0:23,0:17:44.91:0,45,618	0/0:19,0:19:57.19:0,57,874	0/0:25,0:25:43.76:0,44,558	0/0:30,0:29:58.48:0,58,578	1/1:9,0:8:22.88:140,23,0	0/1:18,3:20:31.05:31,0,580	0/1:11,2:13:69.39:69,0,299	0/0:29,0:29:39.21:0,39,540	0/0:22,0:22:64.08:0,64,965	0/0:24,0:24:63.19:0,63,962	0/0:10,0:7:11.91:0,12,197	0/1:20,2:20:42.02:42,0,616	0/1:27,9:36:99:184,0,990	0/0:9,0:9:13.89:0,14,191	0/1:11,3:13:61.92:62,0,386	1/1:18,0:18:46.51:262,47,0	./.	0/1:24,3:27:63.22:63,0,820	0/0:30,0:28:32.16:0,32,388	0/1:21,5:26:72.21:72,0,794	./.
chr10	37634149	.	TGTTG	T	4703.48	PASS	AB=0.980;AC=28;AF=0.538;AN=52;BaseQRankSum=8.811;DP=521;FS=0.733;HRun=0;HaplotypeScore=209.7578;InbreedingCoeff=0.1747;MQ=43.75;MQ0=11;MQRankSum=-6.658;QD=12.61;ReadPosRankSum=-2.971;VQSLOD=3.5274;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:17:13.32:236,13,0	0/1:13,0:13:77.46:77,0,334	0/0:9,0:4:9.02:0,9,98	0/0:16,0:4:2.73:0,3,53	0/0:31,0:31:90.29:0,90,2056	1/1:18,0:17:15.66:270,16,0	1/1:6,0:6:1.08:147,1,0	0/0:22,0:17:44.92:0,45,723	0/0:19,0:19:57.19:0,57,1355	1/1:26,0:26:18.49:555,18,0	1/1:33,0:32:56.21:581,56,0	1/1:10,0:9:26.75:263,27,0	0/1:21,0:20:32.28:32,0,632	0/1:12,0:12:43.43:43,0,343	1/1:26,0:25:57.47:660,57,0	0/0:23,0:23:61.19:0,61,1433	0/0:25,0:25:66.18:0,66,1431	0/1:8,1:7:9.82:102,0,10	0/1:21,0:20:5.39:5,0,870	0/1:37,0:37:52.75:53,0,1269	0/1:8,0:8:7.12:7,0,214	0/1:14,0:13:23.35:23,0,433	1/1:18,0:18:53.52:498,54,0	./.	0/1:26,0:26:34.29:34,0,881	1/1:13,15:27:6.06:1061,6,0	0/1:26,1:27:54.21:54,0,1039	./.
chr10	37634150	.	GT	G	1893.46	PASS	AB=1.000;AC=20;AF=0.385;AN=52;BaseQRankSum=9.126;DP=529;FS=5.373;HRun=2;HaplotypeScore=191.5497;InbreedingCoeff=0.3303;MQ=43.86;MQ0=11;MQRankSum=-4.842;QD=6.94;ReadPosRankSum=-0.039;VQSLOD=0.6379;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:18:3.51:121,4,0	0/1:13,0:13:27.80:28,0,290	0/0:9,0:4:9.03:0,9,122	0/0:17,0:4:5.84:0,6,39	0/0:32,0:32:90.29:0,90,1304	1/1:18,0:17:28.09:145,28,0	0/1:7,0:7:12.99:62,0,13	0/0:22,0:17:42.14:0,42,588	0/0:19,0:19:57.19:0,57,835	0/1:27,0:28:37.51:176,0,38	1/1:34,0:33:14.91:197,15,0	1/1:2,8:9:26.87:302,27,0	0/0:20,0:20:9.48:0,9,529	0/1:11,0:11:8.90:9,0,275	1/1:26,0:25:52.66:305,53,0	0/0:23,0:23:60.20:0,60,887	0/0:27,0:27:69.17:0,69,938	0/1:10,0:7:9.28:57,0,9	0/0:21,0:20:17.47:0,17,639	0/1:36,0:36:25.97:26,0,931	0/0:9,0:9:15.03:0,15,198	0/1:14,0:13:13:13,0,328	1/1:9,8:18:52.25:497,52,0	./.	0/0:26,0:26:11.37:0,11,758	0/1:28,0:27:3.58:137,0,4	0/0:27,0:27:11.13:0,11,751	./.
chr10	37634152	.	TG	T	4743.99	PASS	AB=1.000;AC=25;AF=0.481;AN=52;BaseQRankSum=8.444;DP=532;FS=3.094;HRun=1;HaplotypeScore=180.6322;InbreedingCoeff=0.6549;MQ=43.85;MQ0=11;MQRankSum=-6.106;QD=16.59;ReadPosRankSum=-2.990;VQSLOD=4.0481;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,15:18:47.66:494,48,0	0/1:13,0:13:2.02:2,0,245	0/0:9,0:4:9.02:0,9,90	0/0:17,0:4:0.60:0,1,2	0/0:31,0:31:90.16:0,90,1044	1/1:6,11:16:47.89:527,48,0	1/1:2,5:7:7.63:161,8,0	0/0:23,0:17:41.96:0,42,445	0/0:19,0:19:57.16:0,57,718	1/1:9,20:29:66.21:722,66,0	1/1:10,24:33:81.91:814,82,0	1/1:11,0:9:22.58:153,23,0	0/1:22,0:21:0.68:1,0,395	0/1:10,0:11:1.27:1,0,213	1/1:5,20:24:68.90:811,69,0	0/0:22,0:22:51.11:0,51,714	0/0:26,0:26:64.27:0,64,737	1/1:5,5:7:14.88:183,15,0	0/0:22,0:21:44.41:0,44,556	0/0:37,0:37:40.56:0,41,806	0/0:10,0:10:0.98:0,1,182	0/1:13,0:13:15.31:15,0,246	1/1:20,0:20:41.23:230,41,0	./.	0/0:26,0:26:39.84:0,40,625	1/1:24,3:26:60.07:626,60,0	0/1:27,0:27:3.58:4,0,581	./.
chr10	37634708	.	CT	C	688.86	PASS	AB=0.900;AC=12;AF=0.214;AN=56;BaseQRankSum=6.963;DP=568;FS=2.389;HRun=11;HaplotypeScore=66.0009;InbreedingCoeff=0.2202;MQ=70.16;MQ0=7;MQRankSum=-2.141;QD=3.78;ReadPosRankSum=3.194;VQSLOD=-0.0702;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,1:29:50.38:0,50,716	0/1:3,0:3:5.75:6,0,26	0/1:17,1:13:5.22:5,0,102	0/1:11,1:7:11.89:12,0,71	0/0:23,0:24:50.07:0,50,530	0/1:19,2:21:1.16:1,0,399	0/0:22,0:21:50.95:0,51,518	0/1:35,3:38:1.79:2,0,581	0/0:14,0:14:32.95:0,33,334	0/0:23,2:26:1.81:0,2,385	0/0:18,0:18:45.08:0,45,459	1/1:2,22:24:24.94:411,25,0	0/0:21,1:22:35.43:0,35,542	0/0:11,0:11:5.64:0,6,234	0/0:13,0:13:30.05:0,30,304	0/0:15,0:16:42.03:0,42,415	0/0:30,3:34:14.15:0,14,670	0/1:29,0:29:7.42:7,0,481	0/0:15,1:16:17.46:0,17,386	0/0:28,0:30:70.42:0,70,729	0/0:27,0:27:56.81:0,57,542	0/1:9,1:10:6.59:7,0,141	1/1:2,9:11:20.97:172,21,0	0/1:3,11:15:10.42:210,0,10	0/0:22,0:23:59.61:0,60,593	0/0:24,0:24:54.05:0,54,547	0/0:23,0:22:60.12:0,60,620	0/0:11,0:12:26.63:0,27,259
chr10	37635781	.	C	CT	5332.24	PASS	AB=0.709;AC=24;AF=0.429;AN=56;BaseQRankSum=-5.748;DP=625;FS=5.799;HRun=10;HaplotypeScore=70.9655;InbreedingCoeff=0.8767;MQ=77.38;MQ0=0;MQRankSum=-1.020;QD=20.20;ReadPosRankSum=1.082;VQSLOD=5.8669;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,32:37:68.44:917,68,0	0/0:11,0:11:26.95:0,27,218	0/0:16,0:17:36.47:0,36,238	0/0:19,0:19:29.92:0,30,241	0/0:20,0:20:50.92:0,51,419	1/1:2,15:18:41.94:430,42,0	1/1:0,13:14:35.25:410,35,0	0/0:27,0:30:72.84:0,73,569	0/0:18,0:18:38.92:0,39,317	1/1:7,18:26:53.92:533,54,0	1/1:1,12:13:33.08:352,33,0	1/1:7,2:26:60.44:358,60,0	0/0:19,0:20:30.22:0,30,324	0/0:25,0:26:58.88:0,59,465	1/1:6,25:31:61.93:697,62,0	0/0:20,0:22:51.98:0,52,402	0/0:37,0:39:99:0,105,823	1/1:6,16:22:14.44:347,14,0	0/0:20,1:22:9.87:0,10,272	0/0:33,0:34:73.89:0,74,594	0/1:9,2:11:8.01:8,0,148	0/0:24,0:25:61.85:0,62,482	1/1:6,1:19:46.13:266,46,0	1/1:4,0:7:8.80:58,9,0	0/0:26,0:29:69:0,69,531	1/1:3,24:27:69.17:729,69,0	0/0:27,0:28:70.93:0,71,572	0/1:2,9:12:1.43:227,0,1
chr10	37635818	.	G	GT	1603.28	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=0.255;DP=639;FS=12.336;HRun=4;HaplotypeScore=79.5072;InbreedingCoeff=0.9882;MQ=77.16;MQ0=0;MQRankSum=-2.505;QD=30.83;ReadPosRankSum=0.641;VQSLOD=3.1426;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,129,1440	0/0:10,0:10:27.06:0,27,296	0/0:22,0:22:54.06:0,54,578	0/0:23,0:23:60.05:0,60,641	0/0:21,0:21:60.14:0,60,659	0/0:15,0:15:33.09:0,33,374	0/0:26,0:26:66.15:0,66,732	0/0:31,0:31:81.22:0,81,910	0/0:21,0:21:63.18:0,63,714	0/0:31,0:31:90.26:0,90,1020	0/0:16,0:16:39.11:0,39,442	1/1:1,21:22:63.21:860,63,0	0/0:22,0:22:63.14:0,63,690	0/0:22,0:22:63.18:0,63,712	0/0:33,0:33:99:0,99,1121	0/0:23,0:23:66.19:0,66,748	0/0:34,0:33:96.26:0,96,1078	0/0:20,0:20:51.14:0,51,575	0/0:16,0:16:45.13:0,45,510	0/0:30,0:30:84.19:0,84,922	0/0:14,0:14:42.09:0,42,464	0/0:15,0:15:42.10:0,42,465	1/1:2,13:15:39.12:516,39,0	1/1:2,13:14:27.09:369,27,0	0/0:21,0:21:60.10:0,60,664	0/0:36,0:36:99:0,99,1094	0/0:30,0:30:84.24:0,84,952	0/0:6,0:6:12.03:0,12,135
chr10	37636285	.	CTG	C	1245.19	PASS	AB=0.532;AC=3;AF=0.054;AN=56;BaseQRankSum=9.188;DP=792;FS=5.374;HRun=0;HaplotypeScore=95.6224;InbreedingCoeff=0.5957;MQ=82.26;MQ0=0;MQRankSum=-0.931;QD=34.59;ReadPosRankSum=2.544;VQSLOD=6.0811;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,166,3171	0/0:15,0:15:45.15:0,45,888	0/0:24,0:24:72.25:0,72,1396	0/0:22,0:22:63.14:0,63,1146	0/0:26,0:26:75.26:0,75,1457	0/0:28,0:28:84.27:0,84,1659	0/0:22,0:22:63.22:0,63,1279	0/0:34,0:34:99:0,102,2019	0/0:38,0:38:99:0,111,2206	0/0:29,0:28:84.27:0,84,1625	0/0:25,0:25:75.26:0,75,1474	0/0:22,0:22:66.21:0,66,1305	0/0:12,0:12:36.12:0,36,731	0/0:26,0:26:78.27:0,78,1583	0/0:48,0:47:99:0,144,2883	0/0:38,0:38:99:0,114,2279	0/0:34,0:34:99:0,102,2035	0/0:25,0:25:75.20:0,75,1410	0/0:22,0:22:66.23:0,66,1340	0/0:31,0:31:90.25:0,90,1749	0/0:57,0:57:99:0,169,3400	0/0:23,0:23:69.20:0,69,1275	0/0:27,0:27:81.26:0,81,1591	0/0:34,0:34:99:0,102,2036	0/0:22,0:22:66.19:0,66,1278	0/1:4,29:33:25.65:1210,0,26	0/0:17,0:17:51.17:0,51,1021	1/1:0,3:3:9.03:133,9,0
chr10	37637714	.	C	CTGGT	17999.70	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-15.518;DP=831;FS=2.596;HRun=0;HaplotypeScore=119.0067;InbreedingCoeff=0.9909;MQ=73.31;MQ0=0;MQRankSum=-3.070;QD=44.12;ReadPosRankSum=1.979;VQSLOD=5.0378;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,113,1792	1/1:1,14:15:39.13:959,39,0	0/0:27,0:25:17.04:0,17,355	0/0:19,0:19:9.65:0,10,147	0/0:13,0:13:39.13:0,39,644	0/0:21,0:21:39.12:0,39,621	0/0:34,0:34:84.24:0,84,1336	1/1:22,13:37:51.15:1106,51,0	0/0:26,0:26:54.18:0,54,891	0/0:25,0:25:51.17:0,51,818	0/0:19,0:19:48.16:0,48,794	1/1:6,21:28:57.13:1345,57,0	1/1:5,28:34:74.81:1832,75,0	1/1:7,26:34:60.21:1475,60,0	0/0:43,0:43:84.29:0,84,1389	0/0:48,0:48:99:0,114,1862	0/0:34,0:33:90.29:0,90,1449	0/0:23,0:23:57.16:0,57,907	1/1:19,2:21:24.06:501,24,0	1/1:8,26:36:78.21:1821,78,0	1/1:24,42:68:99:2921,120,0	1/1:5,13:18:27.09:654,27,0	1/1:2,15:18:42.14:1032,42,0	1/1:7,19:27:48.16:1175,48,0	1/1:9,17:29:54.19:1320,54,0	0/0:32,0:32:57.18:0,57,897	1/1:9,30:42:77.95:1859,78,0	0/0:8,0:8:24.08:0,24,398
chr10	37639461	.	A	AAAAAAGAAAAAAG	18603.40	PASS	AB=0.879;AC=26;AF=0.464;AN=56;BaseQRankSum=-0.661;DP=537;FS=0.000;HRun=0;HaplotypeScore=207.1755;InbreedingCoeff=0.8502;MQ=51.70;MQ0=10;MQRankSum=-14.000;QD=72.95;ReadPosRankSum=2.812;VQSLOD=4.5556;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,103,2262	1/1:6,2:8:14.99:849,15,0	0/0:2,0:2:6.02:0,6,165	0/1:5,0:6:22.56:23,0,164	0/0:21,0:20:53.72:0,54,601	0/0:16,0:15:38.98:0,39,792	0/0:23,0:21:57.11:0,57,1657	1/1:37,0:35:78.10:2452,78,0	0/0:15,0:15:38.99:0,39,879	0/0:21,0:18:32.21:0,32,502	0/0:20,0:19:36.51:0,37,636	1/1:13,7:25:42.11:2026,42,0	1/1:19,5:22:48.04:1825,48,0	1/1:13,5:16:39.09:1879,39,0	0/0:17,0:17:43.23:0,43,928	0/0:15,0:14:32.99:0,33,732	0/0:39,0:39:99:0,105,3455	0/0:25,0:25:75.17:0,75,2269	1/1:19,1:19:34.36:988,34,0	1/1:14,2:18:20.99:962,21,0	0/1:8,1:9:4.09:698,0,4	1/1:14,1:14:33.08:1149,33,0	1/1:12,4:17:18.64:1575,19,0	1/1:7,6:18:24.05:1008,24,0	1/1:15,0:13:10.22:978,10,0	0/0:21,0:20:39.68:0,40,918	1/1:18,7:24:48.06:2190,48,0	0/0:7,0:7:15.02:0,15,307
chr10	37639466	.	A	AG	737.57	PASS	AB=0.843;AC=9;AF=0.161;AN=56;BaseQRankSum=3.684;DP=512;FS=2.371;HRun=0;HaplotypeScore=92.0890;InbreedingCoeff=-0.1885;MQ=52.19;MQ0=8;MQRankSum=-6.438;QD=4.52;ReadPosRankSum=4.315;VQSLOD=3.4135;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,112,1180	0/1:6,0:6:2.30:2,0,52	0/0:2,0:2:6:0,6,65	0/0:7,0:6:15.08:0,15,125	0/0:22,0:21:53.12:0,53,435	0/0:15,0:14:40.96:0,41,376	0/0:24,0:22:62.04:0,62,698	0/1:28,7:34:99:121,0,402	0/0:15,0:15:38.60:0,39,433	0/0:20,0:18:44.64:0,45,439	0/0:24,0:23:59.92:0,60,552	0/0:18,0:18:32.88:0,33,280	0/1:16,5:19:60.38:149,0,60	0/1:13,3:14:66.27:68,0,66	0/0:16,0:16:41.91:0,42,420	0/0:14,0:13:35.98:0,36,394	0/0:37,0:37:99:0,106,1324	0/0:26,0:26:78.04:0,78,907	0/1:13,7:19:99:222,0,175	0/0:12,0:12:18.93:0,19,157	0/0:10,0:10:20.76:0,21,149	0/1:12,4:15:87.90:88,0,142	0/0:15,0:15:22.99:0,23,211	0/1:11,0:11:20.29:20,0,51	0/1:8,4:11:85.35:85,0,112	0/0:23,0:23:59.19:0,59,645	0/1:20,6:25:99:118,0,144	0/0:8,0:8:24.01:0,24,237
chr10	37639526	.	A	ATGC	5647.59	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=7.233;DP=593;FS=11.029;HRun=0;HaplotypeScore=109.1082;InbreedingCoeff=0.9505;MQ=75.21;MQ0=0;MQRankSum=-2.764;QD=32.46;ReadPosRankSum=1.561;VQSLOD=4.7384;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:72.24:0,72,1026	1/1:5,1:6:6.02:103,6,0	0/0:28,0:28:36.12:0,36,501	0/0:26,0:23:48.07:0,48,639	0/0:20,0:20:33.11:0,33,470	0/0:20,0:20:57.19:0,57,812	0/0:25,0:25:54.18:0,54,768	1/1:12,8:20:30.04:528,30,0	0/0:17,0:18:51.11:0,51,670	0/0:17,0:17:39.12:0,39,540	0/0:21,0:21:33.10:0,33,452	0/0:19,0:19:42.05:0,42,572	1/1:5,16:21:51.18:1031,51,0	1/1:6,17:22:48.16:971,48,0	0/0:18,0:18:51.16:0,51,709	0/0:22,0:22:57.19:0,57,811	0/0:31,0:31:66.19:0,66,919	0/0:37,0:36:87.29:0,87,1240	1/1:10,10:20:30.10:589,30,0	1/1:12,1:13:3.01:61,3,0	1/1:6,21:29:48.16:972,48,0	1/1:7,6:12:15.05:304,15,0	0/0:19,0:19:15.09:0,15,311	0/0:16,0:15:33.08:0,33,448	1/1:7,5:12:15.05:302,15,0	0/0:28,0:28:54.18:0,54,769	1/1:4,12:17:39.13:788,39,0	0/0:15,0:15:45.10:0,45,601
chr10	37639746	.	TAAC	T	6536.17	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=13.244;DP=515;FS=3.230;HRun=0;HaplotypeScore=74.9847;InbreedingCoeff=0.9958;MQ=77.66;MQ0=0;MQRankSum=-5.301;QD=42.72;ReadPosRankSum=-0.824;VQSLOD=5.3933;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,126,2882	1/1:0,9:9:27.05:429,27,0	0/0:26,0:25:72.25:0,72,1621	0/0:18,0:17:45.15:0,45,958	0/0:26,0:26:75.26:0,75,1727	0/0:18,0:18:54.19:0,54,1226	0/0:16,0:16:48.16:0,48,986	1/1:2,21:23:63.20:1037,63,0	0/0:21,0:21:63.22:0,63,1434	0/0:23,0:23:69.23:0,69,1536	0/0:6,0:6:18.06:0,18,404	0/0:20,0:20:54.17:0,54,1171	1/1:1,13:14:36.12:614,36,0	1/1:1,19:20:42.11:716,42,0	0/0:23,0:23:66.20:0,66,1432	0/0:18,0:18:54.19:0,54,1224	0/0:25,0:25:69.24:0,69,1591	0/0:26,0:26:78.27:0,78,1798	1/1:1,22:23:66.23:1115,66,0	1/1:1,10:11:27.05:416,27,0	1/1:0,18:18:48.12:787,48,0	1/1:0,12:12:36.12:614,36,0	0/0:9,0:9:27.09:0,27,622	0/0:12,0:12:36.12:0,36,821	1/1:0,7:7:18.02:276,18,0	0/0:26,0:26:75.26:0,75,1730	1/1:0,16:16:33.07:532,33,0	0/0:6,0:6:18.06:0,18,403
chr10	37639851	.	CA	C	2451.32	PASS	AB=0.840;AC=26;AF=0.464;AN=56;BaseQRankSum=2.599;DP=496;FS=14.597;HRun=13;HaplotypeScore=53.5791;InbreedingCoeff=0.6936;MQ=54.98;MQ0=21;MQRankSum=1.680;QD=9.25;ReadPosRankSum=1.398;VQSLOD=1.0700;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,27:34:70.54:505,71,0	0/0:6,0:5:9:0,9,82	0/0:9,0:2:5.99:0,6,52	0/1:13,1:7:7.32:7,0,60	0/1:21,2:22:1.47:1,0,308	1/1:5,10:15:19.94:172,20,0	1/1:7,6:13:17.88:131,18,0	0/1:18,4:23:40.07:40,0,247	0/0:18,0:18:31.63:0,32,389	1/1:3,12:16:34.82:244,35,0	1/1:7,12:18:16:197,16,0	1/1:1,7:8:17.87:131,18,0	0/0:12,0:13:33.05:0,33,320	0/0:14,1:15:14.12:0,14,291	1/1:1,16:17:40.81:290,41,0	0/0:16,0:16:39.05:0,39,372	0/0:35,0:35:71.52:0,72,659	0/1:9,10:15:46.71:142,0,47	0/0:20,1:23:12.77:0,13,393	0/0:24,0:23:54.07:0,54,515	0/0:15,0:16:29.87:0,30,272	0/0:17,0:13:30.03:0,30,286	1/1:3,9:10:23.86:175,24,0	1/1:9,6:10:19.86:132,20,0	0/0:12,1:13:27.04:0,27,261	1/1:6,22:29:58.63:421,59,0	0/0:20,2:23:4.13:0,4,350	1/1:1,3:5:10.96:72,11,0
chr10	37641861	.	AT	A	1372.72	PASS	AB=0.783;AC=20;AF=0.357;AN=56;BaseQRankSum=5.426;DP=550;FS=5.975;HRun=16;HaplotypeScore=66.4017;InbreedingCoeff=0.2163;MQ=74.65;MQ0=1;MQRankSum=0.884;QD=4.67;ReadPosRankSum=3.016;VQSLOD=1.6539;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,13:22:30.02:182,30,0	0/0:11,0:11:21.76:0,22,187	0/1:27,1:21:36.15:36,0,74	0/1:20,0:15:11.34:11,0,35	0/0:20,1:22:9.78:0,10,195	0/1:10,14:26:23.70:194,0,24	0/1:3,11:15:18.82:118,0,19	0/0:30,2:32:23.33:0,23,364	0/0:5,0:7:5:0,5,59	1/1:4,13:20:19:203,19,0	0/1:10,12:23:14.12:133,0,14	1/1:4,9:14:24.78:148,25,0	0/0:14,0:14:23.96:0,24,196	0/0:17,1:21:18.09:0,18,257	1/1:1,10:11:17.61:106,18,0	0/0:22,0:22:41.62:0,42,320	0/0:36,4:41:38.60:0,39,515	0/1:7,13:19:12.04:159,0,12	0/1:12,3:15:24.19:24,0,129	0/1:22,5:27:30.69:31,0,155	0/0:10,0:10:23.95:0,24,196	0/0:17,0:17:37.12:0,37,276	0/1:15,2:19:27.47:27,0,50	1/1:5,13:18:29.36:180,29,0	0/1:15,1:16:8.98:9,0,193	0/0:11,0:19:26.59:0,27,158	0/0:25,3:28:14.75:0,15,314	0/0:1,0:12:25.72:0,26,138
chr10	37642270	.	AAAT	A	10015.81	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=17.819;DP=551;FS=21.809;HRun=0;HaplotypeScore=88.9075;InbreedingCoeff=0.9939;MQ=79.27;MQ0=0;MQRankSum=-7.210;QD=52.17;ReadPosRankSum=1.163;VQSLOD=4.8739;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:69.22:0,69,1593	1/1:0,7:7:18.06:329,18,0	0/0:15,0:15:45.14:0,45,1004	0/0:14,0:14:39.06:0,39,761	0/0:24,0:24:72.25:0,72,1731	0/0:18,0:18:54.18:0,54,1283	0/0:15,0:15:45.15:0,45,1109	1/1:0,33:33:99:1723,99,0	0/0:12,0:12:36.12:0,36,858	0/0:28,0:28:84.29:0,84,2052	0/0:29,0:29:84.29:0,84,2011	0/0:17,0:17:51.18:0,51,1243	1/1:0,11:11:30.10:546,30,0	1/1:0,17:17:51.17:932,51,0	0/0:17,0:17:51.18:0,51,1252	0/0:19,0:19:57.19:0,57,1326	0/0:24,0:24:72.25:0,72,1734	0/0:19,0:19:57.17:0,57,1292	1/1:0,9:9:27.09:494,27,0	1/1:0,34:34:99:1863,102,0	1/1:0,5:5:12.04:219,12,0	1/1:0,26:26:78.18:1387,78,0	0/0:26,0:26:78.26:0,78,1860	0/0:14,0:14:42.14:0,42,1034	1/1:0,24:24:72.20:1281,72,0	0/0:35,0:35:99:0,105,2552	1/1:0,26:26:69.24:1242,69,0	0/0:10,0:9:30.10:0,30,652
chr10	37643528	.	CTTTG	C	1089.12	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.991;DP=654;FS=6.514;HRun=0;HaplotypeScore=118.7315;InbreedingCoeff=0.9617;MQ=67.97;MQ0=2;MQRankSum=0.855;QD=30.25;ReadPosRankSum=-0.216;VQSLOD=3.3003;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:75.26:0,75,1790	0/0:12,0:12:21.04:0,21,456	0/0:28,0:22:18.05:0,18,367	0/0:24,0:23:32.68:0,33,766	0/0:28,0:28:57.20:0,57,1337	0/0:21,0:21:45.15:0,45,1084	0/0:21,0:21:36.12:0,36,866	0/0:35,0:35:48.15:0,48,1056	0/0:23,0:23:45.14:0,45,1037	0/0:20,0:19:45.15:0,45,1052	0/0:26,0:26:69.24:0,69,1658	0/0:16,0:25:39.13:0,39,656	0/0:28,0:28:54.19:0,54,1289	0/0:24,0:24:51.18:0,51,1202	0/0:22,0:22:48.16:0,48,1154	0/0:29,0:29:75.24:0,75,1737	0/0:20,0:20:45.15:0,45,1083	0/0:19,0:19:36.12:0,36,855	0/0:18,0:17:12.04:0,12,289	0/0:22,0:22:45.15:0,45,1084	0/0:27,0:27:48.16:0,48,1077	0/0:17,0:17:36.12:0,36,867	0/0:10,0:18:42.11:0,42,579	0/0:25,0:31:31.80:0,32,515	0/0:20,0:20:45.15:0,45,1085	1/1:9,21:30:63.21:1012,63,0	0/0:26,0:26:51.18:0,51,1199	1/1:1,5:6:12.04:193,12,0
chr10	37643691	.	C	CGTT	16266.70	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=10.891;DP=622;FS=0.639;HRun=0;HaplotypeScore=92.6571;InbreedingCoeff=0.9941;MQ=71.24;MQ0=0;MQRankSum=-5.428;QD=53.86;ReadPosRankSum=-1.040;VQSLOD=6.3085;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:69.24:0,69,1148	1/1:2,9:12:21.07:476,21,0	0/0:13,0:13:27.09:0,27,435	0/0:9,0:9:11.07:0,11,152	0/0:25,0:25:72.25:0,72,1194	0/0:30,0:30:87.25:0,87,1411	0/0:16,0:16:45.14:0,45,720	1/1:3,38:42:99:2397,117,0	0/0:25,0:25:66.23:0,66,1087	0/0:27,0:27:78.27:0,78,1298	0/0:15,0:15:42.09:0,42,641	1/1:2,16:18:45.15:976,45,0	1/1:0,21:23:51.15:1155,51,0	1/1:1,19:20:36.12:814,36,0	0/0:23,0:23:63.22:0,63,1048	0/0:28,0:28:81.22:0,81,1292	0/0:17,0:17:48.16:0,48,795	0/0:25,0:25:72.17:0,72,1139	1/1:2,19:22:54.14:1077,54,0	1/1:3,22:27:63.15:1297,63,0	1/1:3,16:20:42.10:903,42,0	1/1:0,16:17:48.16:1068,48,0	1/1:0,19:20:54.19:1221,54,0	1/1:0,25:26:72.25:1628,72,0	1/1:0,20:20:54.19:1221,54,0	0/0:27,0:27:81.23:0,81,1314	1/1:2,33:35:90.31:2036,90,0	0/0:17,0:17:38.99:0,39,585
chr10	37643833	.	GTTT	G	3172.87	PASS	AB=0.556;AC=19;AF=0.339;AN=56;BaseQRankSum=-1.517;DP=557;FS=9.628;HRun=15;HaplotypeScore=107.9267;InbreedingCoeff=0.8957;MQ=75.58;MQ0=1;MQRankSum=-1.143;QD=18.03;ReadPosRankSum=3.395;VQSLOD=2.0958;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:11:27.46:0,27,395	1/1:4,8:12:25.08:267,25,0	0/0:31,0:20:41.44:0,41,413	0/0:21,0:13:14.69:0,15,204	0/0:23,0:26:63.65:0,64,1035	0/0:17,0:18:45.14:0,45,748	0/0:16,0:19:57.04:0,57,907	1/1:9,17:26:47.81:503,48,0	0/0:16,0:17:36.10:0,36,615	0/0:18,0:21:54.06:0,54,747	0/0:23,0:27:64.65:0,65,796	0/0:1,0:13:23.96:0,24,77	1/1:5,7:13:14.90:152,15,0	0/1:3,11:15:13.19:258,0,13	0/0:19,0:21:48.07:0,48,695	0/0:21,0:21:57.13:0,57,879	0/0:25,0:24:51.09:0,51,825	0/0:32,0:32:75.25:0,75,1283	1/1:10,8:18:5.35:237,5,0	1/1:3,13:18:19.94:324,20,0	1/1:6,9:15:26.96:296,27,0	1/1:4,11:14:23.86:255,24,0	0/0:1,0:19:39.17:0,39,173	0/0:4,0:18:36.07:0,36,118	1/1:1,6:7:18.03:202,18,0	0/0:4,0:31:43.39:0,43,138	1/1:4,31:37:79.72:890,80,0	0/0:0,0:9:17.53:0,18,69
chr10	37643992	.	TTGA	T	2039.21	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.690;DP=566;FS=4.742;HRun=0;HaplotypeScore=82.3793;InbreedingCoeff=0.9940;MQ=80.18;MQ0=0;MQRankSum=-3.029;QD=41.62;ReadPosRankSum=2.545;VQSLOD=4.4796;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:60.21:0,60,1383	0/0:5,0:5:15.05:0,15,329	0/0:15,0:15:42.14:0,42,927	0/0:17,0:16:39.12:0,39,799	0/0:21,0:21:60.21:0,60,1369	0/0:16,0:15:42.14:0,42,938	0/0:25,0:25:75.26:0,75,1672	0/0:32,0:32:93.32:0,93,2056	0/0:18,0:18:54.19:0,54,1245	0/0:29,0:29:84.29:0,84,1876	0/0:21,0:21:60.21:0,60,1381	1/1:0,16:16:45.15:767,45,0	0/0:15,0:15:45.15:0,45,1035	0/0:22,0:22:63.22:0,63,1421	0/0:18,0:18:54.19:0,54,1245	0/0:30,0:30:75.26:0,75,1699	0/0:27,0:27:78.25:0,78,1736	0/0:22,0:22:66.23:0,66,1491	0/0:26,0:26:69.24:0,69,1552	0/0:28,0:28:81.28:0,81,1844	0/0:20,0:20:60.21:0,60,1379	0/0:11,0:11:30.10:0,30,686	1/1:0,17:17:41.88:698,42,0	1/1:0,16:16:42.14:716,42,0	0/0:12,0:12:36.12:0,36,813	0/0:25,0:25:75.26:0,75,1729	0/0:27,0:27:78.27:0,78,1794	0/0:13,0:13:39.13:0,39,899
chr10	37644156	.	CT	C	2130.25	PASS	AB=0.726;AC=13;AF=0.241;AN=54;BaseQRankSum=3.660;DP=567;FS=34.021;HRun=9;HaplotypeScore=110.6194;InbreedingCoeff=0.2469;MQ=57.93;MQ0=11;MQRankSum=-4.901;QD=10.70;ReadPosRankSum=1.861;VQSLOD=0.5748;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:21:41.42:0,41,440	1/1:2,3:4:6.47:54,6,0	0/0:38,0:13:22.43:0,22,169	0/0:33,0:11:10.69:0,11,62	0/0:22,0:22:53.59:0,54,594	0/0:19,0:17:39.59:0,40,448	0/0:12,0:12:24.87:0,25,260	0/1:18,13:31:97.07:367,0,97	0/0:17,0:17:33.48:0,33,351	0/0:28,1:28:51.44:0,51,797	0/0:26,0:26:51.24:0,51,539	0/0:20,0:20:32.22:0,32,160	0/1:9,7:16:13.98:267,0,14	0/1:13,7:21:17.99:221,0,18	0/0:14,0:14:36.58:0,37,416	0/0:26,0:26:60.04:0,60,630	0/0:21,0:21:39.23:0,39,404	0/0:13,0:12:21.05:0,21,234	0/1:17,7:23:57.24:269,0,57	0/1:16,8:23:4.71:231,0,5	1/1:9,0:9:8.99:82,9,0	1/1:0,2:2:6:54,6,0	0/0:6,0:6:7.43:0,7,29	./.	0/1:18,9:27:92.72:234,0,93	0/0:26,0:26:54.48:0,54,556	0/1:19,21:38:56.73:508,0,57	0/0:11,0:10:15.04:0,15,173
chr10	37644164	.	TTC	T	1206.71	PASS	AB=1.000;AC=22;AF=0.407;AN=54;BaseQRankSum=7.416;DP=564;FS=11.729;HRun=0;HaplotypeScore=122.2404;InbreedingCoeff=0.7527;MQ=52.99;MQ0=14;MQRankSum=-7.315;QD=5.34;ReadPosRankSum=-3.655;VQSLOD=1.3409;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:20:30.10:0,30,348	1/1:5,0:4:6.65:23,7,0	0/0:34,0:9:6.16:0,6,75	0/0:38,0:9:1.21:0,1,31	0/0:24,0:24:12.33:0,12,545	0/0:17,0:15:39:0,39,377	0/0:11,0:11:23.93:0,24,207	1/1:39,0:38:56.28:242,56,0	0/0:14,0:14:23.69:0,24,338	0/0:32,0:32:53.51:0,54,701	0/0:24,0:24:14.93:0,15,384	0/1:17,0:17:1.58:50,0,2	1/1:15,1:16:30.01:159,30,0	1/1:22,0:22:37.81:191,38,0	0/0:17,0:17:35.63:0,36,362	0/0:27,0:27:60.23:0,60,674	0/0:22,0:22:12.90:0,13,348	0/0:10,0:9:20.24:0,20,182	0/1:30,0:27:23.12:79,0,23	1/1:21,2:22:26.64:127,27,0	1/1:4,0:4:4.99:15,5,0	1/1:3,0:3:2.01:11,2,0	1/1:9,0:9:12.05:72,12,0	./.	1/1:23,1:24:22.55:169,23,0	0/0:27,0:26:26.07:0,26,514	1/1:34,0:32:25:268,25,0	0/0:8,0:7:17.53:0,18,205
chr10	37644170	.	T	TTC	4203.60	PASS	AB=1.000;AC=15;AF=0.278;AN=54;BaseQRankSum=-9.129;DP=589;FS=19.491;HRun=0;HaplotypeScore=125.0137;InbreedingCoeff=0.8836;MQ=51.92;MQ0=17;MQRankSum=3.603;QD=23.22;ReadPosRankSum=1.736;VQSLOD=3.1366;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,11:21:24.31:461,24,0	0/0:6,0:5:8.38:0,8,43	0/0:36,0:10:17.46:0,17,124	0/1:43,0:10:0.99:1,0,45	0/0:27,0:27:61.54:0,62,704	1/1:7,11:16:39.88:543,40,0	1/1:10,4:14:35.54:362,36,0	0/0:44,0:43:99:0,100,737	0/0:15,0:15:41.30:0,41,487	1/1:3,29:32:89.42:1306,89,0	1/1:2,17:20:51.08:717,51,0	0/0:17,0:17:24:0,24,212	0/0:15,0:15:38.56:0,39,249	0/0:23,0:23:42.51:0,43,299	1/1:8,11:19:43.63:515,44,0	0/0:25,0:25:63.17:0,63,859	0/0:21,0:21:52.37:0,52,520	1/1:9,4:12:24.01:299,24,0	0/0:28,0:25:55.51:0,56,426	0/0:23,0:22:31.61:0,32,209	0/0:2,0:2:2.96:0,3,19	0/0:3,0:3:5.97:0,6,56	0/0:12,0:12:17.62:0,18,109	./.	0/0:24,0:24:51.06:0,51,413	0/0:27,0:26:47.52:0,48,706	0/0:35,0:33:72.21:0,72,570	0/0:12,0:8:20.82:0,21,229
chr10	37644171	.	T	TTTTC	3210.68	PASS	AB=0.959;AC=12;AF=0.214;AN=56;BaseQRankSum=3.753;DP=586;FS=25.191;HRun=0;HaplotypeScore=146.0770;InbreedingCoeff=0.0593;MQ=49.49;MQ0=18;MQRankSum=-4.399;QD=16.13;ReadPosRankSum=2.928;VQSLOD=1.8620;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:40.84:0,41,242	0/1:6,0:5:30.10:62,0,30	0/0:35,0:8:7.73:0,8,82	0/0:44,0:10:4.95:0,5,63	0/0:26,0:26:65.67:0,66,822	0/0:18,0:16:37.76:0,38,223	0/0:13,0:14:17.81:0,18,152	0/1:43,1:43:99:545,0,296	0/0:15,0:15:38.32:0,38,525	0/0:30,0:30:72.98:0,73,456	0/0:20,0:20:39.02:0,39,216	0/0:18,0:18:17.96:0,18,149	0/1:13,1:14:50.53:316,0,51	0/1:19,1:20:34.78:233,0,35	0/0:19,0:19:43.06:0,43,262	0/0:25,0:25:60.13:0,60,945	0/0:21,0:21:49.26:0,49,532	0/0:13,0:12:16.41:0,16,80	0/1:28,0:25:99:502,0,181	0/1:22,1:22:63.70:310,0,64	1/1:2,0:2:2.92:17,3,0	1/1:3,0:3:5.93:55,6,0	0/0:14,0:14:15.38:0,15,81	0/0:13,0:12:0:0,0,0	0/1:24,0:24:95.65:313,0,96	0/0:28,0:27:69.27:0,69,851	0/1:29,6:33:68.99:1007,0,69	0/0:12,0:8:20.89:0,21,267
chr10	37644178	.	TTTC	T	2168.48	PASS	AB=0.864;AC=20;AF=0.357;AN=56;BaseQRankSum=0.881;DP=580;FS=2.985;HRun=0;HaplotypeScore=120.4161;InbreedingCoeff=0.0836;MQ=41.78;MQ0=22;MQRankSum=-1.678;QD=7.56;ReadPosRankSum=-3.247;VQSLOD=2.4177;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:23:27.56:28,0,324	0/1:6,0:5:24.03:28,0,24	0/0:30,0:3:0.30:0,0,1	0/0:46,0:8:6.87:0,7,46	0/0:27,0:27:31.85:0,32,623	0/0:15,0:13:36.05:0,36,479	0/0:12,0:12:29.66:0,30,257	0/1:37,7:43:99:282,0,195	0/0:14,0:14:21.13:0,21,494	0/0:30,0:30:36.09:0,36,553	0/0:19,0:19:9.37:0,9,348	1/1:19,0:19:10.37:31,10,0	0/1:11,4:15:36.48:216,0,36	0/1:14,4:18:99:147,0,101	0/0:20,0:20:9.60:0,10,282	0/0:23,0:23:55.40:0,55,820	0/0:17,0:17:11.26:0,11,440	0/1:12,0:11:30.37:30,0,78	0/1:20,8:24:85.07:342,0,85	0/1:19,4:22:42.18:160,0,42	1/1:2,0:2:2.98:21,3,0	1/1:5,0:4:3.01:43,3,0	1/1:17,0:17:32.85:225,33,0	1/1:13,0:12:3.43:20,3,0	0/1:19,6:24:17.14:327,0,17	0/0:28,0:26:17.83:0,18,562	0/1:23,13:34:99:441,0,155	0/0:12,0:8:14.81:0,15,214
chr10	37644179	.	TTC	T	1985.32	PASS	AB=0.967;AC=21;AF=0.375;AN=56;BaseQRankSum=3.040;DP=574;FS=0.809;HRun=0;HaplotypeScore=111.6492;InbreedingCoeff=0.1840;MQ=41.72;MQ0=22;MQRankSum=-3.533;QD=6.97;ReadPosRankSum=-0.582;VQSLOD=3.3608;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:23,1:23:26.90:27,0,252	0/1:6,0:5:15.93:28,0,16	0/0:28,0:1:0.47:0,0,1	0/0:44,0:8:6.41:0,6,45	0/0:27,0:27:26.76:0,27,501	0/0:14,1:13:36.01:0,36,361	0/0:12,0:12:31.58:0,32,249	0/1:44,0:42:74.01:276,0,74	0/0:14,0:14:20.15:0,20,357	0/0:30,0:30:43.78:0,44,528	0/0:19,0:19:18.41:0,18,295	1/1:19,0:19:14.99:130,15,0	0/1:15,0:15:10.70:201,0,11	0/1:16,2:18:41.28:126,0,41	0/0:19,1:20:16.49:0,16,282	0/0:23,0:23:36.53:0,37,623	0/0:17,0:17:4.18:0,4,322	0/1:11,1:11:27.90:28,0,87	0/1:27,0:23:29.12:257,0,29	0/1:20,2:21:21.38:123,0,21	1/1:3,0:3:2.98:21,3,0	1/1:5,0:4:3:29,3,0	1/1:17,0:17:33.90:252,34,0	1/1:13,0:12:3.43:20,3,0	1/1:22,3:24:28.21:324,28,0	0/0:28,0:26:12.17:0,12,490	0/1:35,0:33:99:320,0,113	0/0:12,0:8:14.01:0,14,149
chr10	37644186	.	TTC	T	848.72	PASS	AB=1.000;AC=20;AF=0.357;AN=56;BaseQRankSum=4.506;DP=529;FS=2.514;HRun=0;HaplotypeScore=106.7225;InbreedingCoeff=0.2742;MQ=38.34;MQ0=20;MQRankSum=-4.401;QD=3.03;ReadPosRankSum=-0.134;VQSLOD=2.4279;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:22:14.05:14,0,252	1/1:4,0:3:5.27:21,5,0	0/0:19,0:1:0.47:0,0,1	0/0:32,0:3:3.01:0,3,41	0/0:27,0:26:35.21:0,35,477	0/0:16,0:14:26.52:0,27,167	0/0:14,0:14:27.39:0,27,155	0/1:41,0:38:66.05:66,0,218	0/0:14,0:14:18.63:0,19,312	0/0:28,0:28:31.82:0,32,308	0/0:17,0:17:17.67:0,18,177	0/1:17,0:17:0:1,0,0	1/1:15,0:15:1.48:70,1,0	1/1:17,1:18:3.06:68,3,0	0/0:16,0:16:16.95:0,17,242	0/0:25,0:23:54.34:0,54,511	0/0:17,0:17:5.63:0,6,303	0/0:9,0:8:4.18:0,4,70	0/1:28,0:24:54.55:115,0,55	1/1:23,0:21:25.84:106,26,0	0/1:4,0:4:0.77:3,0,1	0/0:4,0:3:1.25:0,1,3	1/1:14,2:16:29.06:246,29,0	1/1:4,1:4:3.47:28,3,0	0/1:24,0:23:26.09:64,0,26	0/1:27,0:25:40.50:41,0,153	0/1:35,0:33:18.08:168,0,18	0/0:11,0:8:13.46:0,13,83
chr10	37644188	.	CT	C	897.05	PASS	AB=0.821;AC=31;AF=0.596;AN=52;BaseQRankSum=1.671;DP=520;FS=5.324;HRun=14;HaplotypeScore=97.5538;InbreedingCoeff=0.2234;MQ=37.91;MQ0=22;MQRankSum=-3.139;QD=2.39;ReadPosRankSum=1.124;VQSLOD=0.2785;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:15,8:22:16.18:50,0,16	1/1:1,0:3:4.07:12,4,0	0/0:18,0:1:0:0,0,0	0/0:32,0:3:2.99:0,3,24	0/1:24,3:26:7.61:8,0,201	1/1:8,9:16:4.05:129,4,0	1/1:5,9:14:20.77:144,21,0	1/1:34,0:38:10.92:34,11,0	0/0:14,0:14:20.97:0,21,180	1/1:16,10:26:32.46:225,32,0	1/1:10,6:16:16.78:108,17,0	./.	0/1:12,0:16:0.34:0,0,20	0/1:12,0:18:3.17:32,0,3	0/1:11,4:16:13.10:36,0,13	0/0:23,0:22:29.91:0,30,260	0/0:17,0:17:21.83:0,22,179	1/1:7,1:8:4.92:26,5,0	0/1:23,0:25:12.20:26,0,12	0/1:11,0:21:12.71:13,0,13	1/1:2,0:4:1.57:18,2,0	./.	0/1:14,0:14:5.93:6,0,11	1/1:5,0:4:0.11:1,0,0	0/0:22,0:23:3.92:0,4,47	1/1:20,8:25:20.64:144,21,0	0/1:32,0:33:0.37:0,0,63	1/1:9,1:7:5.76:41,6,0
chr10	37644421	.	C	CCT	3163.01	PASS	AB=1.000;AC=43;AF=0.768;AN=56;BaseQRankSum=-2.341;DP=417;FS=1.233;HRun=0;HaplotypeScore=85.9847;InbreedingCoeff=0.5767;MQ=76.60;MQ0=3;MQRankSum=1.165;QD=9.58;ReadPosRankSum=-0.641;VQSLOD=2.8108;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,15:28:25.17:288,25,0	1/1:8,0:8:12.37:73,12,0	0/1:21,0:12:20.93:21,0,57	0/0:21,0:12:5.18:0,5,51	0/0:20,0:20:35.99:0,36,367	1/1:9,11:20:26.94:337,27,0	1/1:8,0:8:11.97:128,12,0	1/1:19,0:18:27.04:220,27,0	0/0:13,0:12:33.04:0,33,356	1/1:4,8:12:20.85:153,21,0	1/1:5,11:16:31.25:279,31,0	0/1:17,0:17:14.68:42,0,15	1/1:9,0:9:10.13:64,10,0	0/1:9,0:9:13.15:52,0,13	1/1:3,12:16:17.92:210,18,0	0/0:13,0:13:27.09:0,27,369	0/0:20,0:20:37.74:0,38,454	1/1:8,2:10:20.57:223,21,0	1/1:19,0:19:18.99:214,19,0	1/1:15,0:15:17.49:117,17,0	1/1:12,0:12:16.80:126,17,0	1/1:6,0:6:3.92:43,4,0	1/1:14,0:14:6.13:72,6,0	1/1:15,0:15:4.47:74,4,0	1/1:14,0:14:14.24:111,14,0	1/1:18,1:19:42.13:341,42,0	1/1:12,0:12:11.78:116,12,0	1/1:11,0:11:7.40:39,7,0
chr10	37644423	.	T	TC	3164.80	PASS	AB=0.918;AC=39;AF=0.696;AN=56;BaseQRankSum=-1.354;DP=452;FS=19.270;HRun=2;HaplotypeScore=84.9112;InbreedingCoeff=0.5335;MQ=72.59;MQ0=4;MQRankSum=-2.223;QD=9.65;ReadPosRankSum=3.916;VQSLOD=0.1232;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:26,2:28:67.32:186,0,67	1/1:8,0:8:20.18:100,20,0	0/0:33,0:12:3.34:0,3,107	0/0:22,0:10:11.31:0,11,76	0/0:21,0:21:44.87:0,45,412	0/1:20,2:22:29.44:187,0,29	1/1:8,0:8:11.97:103,12,0	1/1:20,0:19:30.43:242,30,0	0/0:13,0:12:33.07:0,33,372	0/1:10,1:11:6.34:102,0,6	1/1:20,0:20:8.82:180,9,0	1/1:18,0:18:13.60:93,14,0	1/1:10,0:10:16.95:92,17,0	1/1:10,0:10:4.62:68,5,0	0/1:16,2:18:0.91:157,0,1	0/0:12,0:12:14.96:0,15,325	0/0:23,0:23:41.21:0,41,426	0/1:11,1:12:13.95:149,0,14	1/1:19,0:19:40.59:275,41,0	1/1:15,0:15:28.08:157,28,0	1/1:10,0:10:21.72:143,22,0	1/1:5,0:5:10.88:61,11,0	1/1:14,0:14:23.52:118,24,0	1/1:16,0:16:20.16:125,20,0	1/1:14,3:17:30.73:192,31,0	1/1:6,15:21:41.28:398,41,0	1/1:16,0:16:23.98:145,24,0	1/1:6,4:10:9.39:78,9,0
chr10	37644934	.	CTG	C	1301.51	PASS	AB=0.535;AC=3;AF=0.054;AN=56;BaseQRankSum=6.221;DP=877;FS=0.648;HRun=0;HaplotypeScore=104.9772;InbreedingCoeff=0.5944;MQ=88.29;MQ0=0;MQRankSum=-1.193;QD=27.69;ReadPosRankSum=0.979;VQSLOD=4.7056;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,132,2392	0/0:13,0:13:39.08:0,39,692	0/0:29,0:29:84.14:0,84,1432	0/0:34,0:34:99:0,99,1738	0/0:28,0:28:84.29:0,84,1573	0/0:28,0:28:84.27:0,84,1522	0/0:24,0:24:66.20:0,66,1172	0/0:28,0:28:81.26:0,81,1451	0/0:31,0:31:93.30:0,93,1688	0/0:49,0:48:99:0,135,2489	0/0:13,0:13:39.13:0,39,719	0/0:31,0:31:87.27:0,87,1556	0/0:40,0:40:99:0,117,2143	0/0:40,0:40:99:0,117,2139	0/0:60,0:60:99:0,172,3129	0/0:42,0:42:99:0,126,2296	0/0:31,0:31:90.27:0,90,1590	0/0:16,0:16:45.14:0,45,811	0/0:21,0:21:60.21:0,60,1113	0/0:25,0:25:72.23:0,72,1308	0/0:48,0:48:99:0,141,2592	0/0:20,0:20:60.19:0,60,1081	0/0:25,0:24:72.22:0,72,1277	0/0:50,0:50:99:0,147,2684	0/0:23,0:23:66.23:0,66,1235	0/1:5,33:37:66.29:1266,0,66	0/0:34,0:32:99:0,99,1733	1/1:0,9:8:9.03:132,9,0
chr10	37645226	.	GCAGTGCAGCGGGTGCTGTTGCCGTAGGATGGATATCTAA	G	305.25	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=-0.207;DP=749;FS=6.376;HRun=0;HaplotypeScore=526.3174;InbreedingCoeff=0.4883;MQ=49.52;MQ0=71;MQRankSum=2.859;QD=2.59;ReadPosRankSum=2.870;VQSLOD=-0.3443;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:65,0:59:99:0,134,2142	0/0:8,0:7:17.79:0,18,120	0/0:44,0:5:14.92:0,15,116	0/1:50,0:6:8.06:8,0,67	0/0:22,0:21:50.87:0,51,834	0/0:23,0:21:47.84:0,48,787	0/0:32,0:31:87.59:0,88,1457	0/0:23,0:17:44.01:0,44,336	0/0:44,0:43:66.12:0,66,1946	0/0:37,0:34:89.58:0,90,1433	0/0:12,0:11:23.23:0,23,281	1/1:21,0:14:29.91:243,30,0	0/0:25,0:24:63.32:0,63,612	0/0:28,0:28:69.98:0,70,703	0/0:39,0:38:84:0,84,1739	0/0:40,0:40:99:0,103,1699	0/0:42,0:41:99:0,117,2483	0/0:34,0:34:13.05:0,13,1464	0/0:14,0:10:17.81:0,18,163	0/0:12,0:9:26.82:0,27,232	0/0:40,0:37:54.97:0,55,575	0/0:9,0:8:20.84:0,21,170	0/0:0,9:9:0:0,0,0	1/1:25,0:18:5.97:153,6,0	0/0:13,0:13:35.82:0,36,359	0/1:13,0:13:23.30:23,0,123	0/0:16,0:15:44.74:0,45,546	0/1:9,0:8:6.87:7,0,96
chr10	37645408	.	GGGCTGCTGCCGCAC	G	405.32	PASS	AC=12;AF=1.000;AN=12;DP=69;FS=0.000;HRun=0;HaplotypeScore=17.1197;MQ=37.29;MQ0=3;QD=20.27;VQSLOD=0.7055;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	1/1:1,0:1:0.47:1,0,0	./.	./.	1/1:0,5:5:3.01:58,3,0	./.	./.	./.	./.	1/1:1,2:2:6.02:97,6,0	./.	./.	1/1:1,0:1:3.01:97,3,0	./.	./.	1/1:4,0:4:9.02:144,9,0	./.	./.	./.	1/1:1,5:6:5.98:77,6,0	./.	./.	./.	./.	./.	./.	./.	./.
chr10	37646828	.	CCA	C	11640.49	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=16.889;DP=851;FS=0.554;HRun=0;HaplotypeScore=103.8344;InbreedingCoeff=0.9988;MQ=84.81;MQ0=1;MQRankSum=-3.163;QD=38.93;ReadPosRankSum=1.643;VQSLOD=6.6881;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:65,0:65:99:0,196,3585	1/1:0,9:9:18.06:265,18,0	0/0:32,0:32:90.29:0,90,1548	0/0:23,0:22:60.11:0,60,995	0/0:31,0:31:90.28:0,90,1610	0/0:22,0:22:60.21:0,60,1124	0/0:29,0:29:78.25:0,78,1406	1/1:2,27:29:81.26:1173,81,0	0/0:32,0:32:90.31:0,90,1683	0/0:39,0:39:99:0,108,1994	0/0:18,0:18:48.16:0,48,899	0/0:39,0:39:99:0,111,2078	1/1:0,27:27:72.24:1060,72,0	1/1:0,25:25:66.22:972,66,0	0/0:42,0:42:99:0,120,2205	0/0:26,0:25:69.24:0,69,1292	0/0:34,0:34:99:0,102,1910	0/0:23,0:23:69.17:0,69,1223	1/1:0,25:25:75.24:1085,75,0	1/1:2,23:25:66.22:972,66,0	1/1:2,76:78:99:2957,202,0	1/1:2,24:26:69.20:992,69,0	0/0:19,0:19:54.19:0,54,1011	0/0:30,0:30:90.31:0,90,1685	1/1:1,25:26:69.23:1016,69,0	0/0:37,0:37:99:0,105,1964	1/1:1,28:28:78.26:1148,78,0	0/0:11,0:11:33.11:0,33,618
chr10	37647117	.	GT	G	1543.22	PASS	AB=0.840;AC=27;AF=0.482;AN=56;BaseQRankSum=7.559;DP=736;FS=1.206;HRun=16;HaplotypeScore=88.6463;InbreedingCoeff=0.3208;MQ=64.52;MQ0=3;MQRankSum=-0.002;QD=3.33;ReadPosRankSum=4.271;VQSLOD=0.3520;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:23,2:28:7.33:7,0,247	0/1:4,4:9:4.36:64,0,4	0/1:30,0:9:12.76:19,0,13	0/0:27,0:15:8.94:0,9,63	0/0:26,5:32:12.19:0,12,306	0/0:24,2:25:5.63:0,6,242	0/1:15,3:20:18.81:19,0,173	1/1:23,14:37:17.47:198,17,0	0/0:24,0:25:40.50:0,41,307	0/1:31,3:35:5.79:6,0,264	0/0:24,1:25:29.62:0,30,334	1/1:8,0:21:11.25:36,11,0	1/1:7,10:18:3.17:124,3,0	0/1:15,2:18:7.12:56,0,7	0/0:27,3:31:32.41:0,32,456	0/0:20,3:24:18.10:0,18,340	0/0:21,1:22:28.40:0,28,319	0/0:37,1:38:21.14:0,21,437	1/1:25,4:31:0.19:86,0,0	0/1:30,10:40:6.99:231,0,7	1/1:7,14:23:33.82:192,34,0	1/1:13,16:32:49.68:285,50,0	1/1:2,0:15:22.58:63,23,0	1/1:3,0:12:8.14:23,8,0	1/1:12,12:25:9.48:142,9,0	0/1:23,3:26:13.60:14,0,188	0/1:21,16:38:80.88:166,0,81	0/0:20,2:23:20.99:0,21,355
chr10	37647569	.	TGCTGGAA	T	12527.27	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=17.359;DP=779;FS=8.755;HRun=0;HaplotypeScore=192.5084;InbreedingCoeff=0.9926;MQ=83.24;MQ0=0;MQRankSum=-17.360;QD=52.20;ReadPosRankSum=0.509;VQSLOD=3.7956;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,138,5079	1/1:8,6:14:12.04:297,12,0	0/0:32,0:32:78.22:0,78,2541	0/0:24,0:24:36.02:0,36,1539	0/0:39,0:39:99:0,105,3981	0/0:30,0:30:81.26:0,81,3004	0/0:24,0:24:63.19:0,63,2209	1/1:9,24:34:75.26:1801,75,0	0/0:46,0:46:99:0,135,4864	0/0:39,0:39:99:0,111,4066	0/0:14,0:14:36.10:0,36,1205	0/0:38,0:38:99:0,102,3844	1/1:8,27:35:71.81:1783,72,0	1/1:3,23:27:63.22:1561,63,0	0/0:42,0:42:99:0,123,4561	0/0:32,0:32:87.30:0,87,3194	0/0:28,0:28:78.27:0,78,2899	0/0:26,0:26:78.21:0,78,2680	1/1:3,8:11:24.07:543,24,0	1/1:0,21:20:54.12:1275,54,0	1/1:5,15:20:27.09:645,27,0	1/1:5,25:30:66.14:1577,66,0	0/0:18,0:18:39.13:0,39,1514	0/0:21,0:21:60.19:0,60,2151	1/1:3,18:21:48.16:1187,48,0	0/0:30,0:30:78.27:0,78,3028	1/1:1,26:27:75.26:1858,75,0	0/0:5,0:5:15.05:0,15,582
chr10	37650590	.	G	GTT	648.18	PASS	AC=14;AF=0.259;AN=54;BaseQRankSum=-1.530;DP=198;FS=0.000;HRun=11;HaplotypeScore=28.1296;InbreedingCoeff=0.7188;MQ=68.92;MQ0=8;MQRankSum=1.035;QD=16.20;ReadPosRankSum=0.510;VQSLOD=0.5528;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,5:7:10.28:133,10,0	0/0:3,0:3:9:0,9,82	0/0:25,0:9:3.94:0,4,77	0/0:21,0:9:10.76:0,11,97	0/0:7,0:8:7.12:0,7,134	1/1:1,3:5:5.51:52,6,0	1/1:1,5:7:11.53:139,12,0	0/0:7,0:6:18.02:0,18,169	0/0:5,0:6:8.89:0,9,125	1/1:4,5:8:21.02:280,21,0	1/1:2,1:2:2.84:14,3,0	0/0:5,0:5:11.88:0,12,111	0/0:1,0:1:3:0,3,29	0/0:1,0:1:3:0,3,29	1/1:1,4:5:9.03:130,9,0	0/0:10,0:11:29.50:0,29,254	0/0:11,0:13:29.78:0,30,274	1/1:2,2:3:6:67,6,0	0/0:6,0:6:12:0,12,113	0/0:4,0:4:12.02:0,12,116	./.	0/0:5,0:5:15.02:0,15,145	0/0:6,0:6:18.03:0,18,175	0/0:9,0:9:20.82:0,21,203	0/0:4,0:4:8.99:0,9,87	0/0:0,0:8:20.46:0,20,86	0/0:7,0:9:23.78:0,24,216	0/0:0,0:2:5.49:0,5,24
chr10	37650789	.	GTT	G	2325.58	PASS	AB=0.748;AC=26;AF=0.481;AN=54;BaseQRankSum=-2.390;DP=432;FS=4.214;HRun=15;HaplotypeScore=66.1694;InbreedingCoeff=0.6507;MQ=78.50;MQ0=3;MQRankSum=0.176;QD=9.30;ReadPosRankSum=4.172;VQSLOD=1.6849;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,25:32:30.32:396,30,0	0/1:2,2:7:12.43:39,0,12	0/0:21,1:16:23.92:0,24,238	0/1:17,1:17:2.57:3,0,105	0/0:9,0:9:21.48:0,21,236	1/1:3,12:16:32.45:261,32,0	1/1:6,7:14:20.62:170,21,0	0/1:21,1:37:50.79:51,0,107	0/0:15,0:19:44.43:0,44,456	1/1:6,6:12:20.87:181,21,0	1/1:1,7:8:17.95:157,18,0	1/1:5,1:8:7.96:88,8,0	0/0:4,0:9:20:0,20,82	0/0:3,0:8:10.50:0,10,67	1/1:5,14:21:44.17:352,44,0	0/0:18,0:18:36.05:0,36,423	0/0:19,0:22:38.45:0,38,441	1/1:2,21:23:32.98:290,33,0	0/0:8,0:15:28.81:0,29,201	0/1:7,1:10:36.18:36,0,51	0/0:6,1:21:11.25:0,11,119	0/0:2,0:8:17.71:0,18,91	1/1:3,5:8:11.94:106,12,0	1/1:2,12:17:20.40:259,20,0	0/0:2,0:3:5.49:0,5,32	1/1:3,0:16:29.61:141,30,0	0/0:9,2:26:0.52:0,1,164	./.
chr10	37650968	.	CA	C	2169.81	PASS	AB=0.761;AC=13;AF=0.232;AN=56;BaseQRankSum=13.703;DP=597;FS=4.044;HRun=12;HaplotypeScore=72.8337;InbreedingCoeff=0.6518;MQ=74.06;MQ0=1;MQRankSum=0.710;QD=11.79;ReadPosRankSum=2.929;VQSLOD=3.7442;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,33:42:83.24:636,83,0	0/0:8,0:8:18.04:0,18,183	0/1:15,1:15:14.84:15,0,113	0/0:14,0:14:17.04:0,17,137	0/0:26,0:25:59.97:0,60,564	1/1:3,19:23:19.50:322,20,0	1/1:3,17:20:41.82:324,42,0	0/0:35,3:39:15.46:0,15,663	0/0:14,2:16:1.61:0,2,375	1/1:13,13:26:14.59:293,15,0	0/1:9,3:11:15.25:65,0,15	0/0:18,1:19:18.80:0,19,349	0/0:16,0:17:44.85:0,45,419	0/0:12,0:12:9.99:0,10,258	1/1:3,21:25:52.83:399,53,0	0/0:25,0:26:45.82:0,46,631	0/0:32,0:32:84.17:0,84,853	0/1:3,17:20:9.79:297,0,10	0/0:10,0:10:24.02:0,24,228	0/0:22,0:22:60.05:0,60,579	0/0:31,0:31:83.98:0,84,824	0/0:14,0:14:35.99:0,36,340	0/0:15,1:17:9.61:0,10,281	0/0:24,0:25:68.82:0,69,647	0/0:17,0:17:12.83:0,13,295	0/0:17,0:17:42:0,42,409	0/0:37,0:37:81.11:0,81,791	0/0:11,0:12:32.74:0,33,318
chr10	37653163	.	TTC	T	1348.40	PASS	AB=0.972;AC=12;AF=0.214;AN=56;BaseQRankSum=4.405;DP=427;FS=8.402;HRun=0;HaplotypeScore=65.2400;InbreedingCoeff=0.6264;MQ=41.73;MQ0=41;MQRankSum=0.918;QD=9.17;ReadPosRankSum=1.444;VQSLOD=2.3218;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:40,0:37:37.36:402,37,0	0/0:5,0:5:8.15:0,8,40	0/0:15,0:2:2.37:0,2,9	0/0:25,0:1:1.25:0,1,3	0/0:14,0:11:20.44:0,20,160	1/1:17,1:18:35.05:248,35,0	1/1:18,3:21:60.62:439,61,0	0/0:14,0:11:24.24:0,24,172	0/0:14,0:14:34.74:0,35,267	1/1:13,0:13:2.65:127,3,0	0/1:16,1:17:14.22:64,0,14	0/0:13,0:11:21.46:0,21,222	0/0:11,0:11:15.04:0,15,91	0/0:17,0:17:30.90:0,31,159	0/1:22,0:19:65.83:151,0,66	0/0:11,0:9:11.99:0,12,121	0/0:26,0:26:46.29:0,46,389	1/1:15,1:14:13.75:87,14,0	0/0:12,0:12:5.66:0,6,140	0/0:13,0:8:18.61:0,19,127	0/0:10,0:9:13.61:0,14,82	0/0:7,0:6:6.69:0,7,49	0/0:8,0:8:12.37:0,12,98	0/0:20,0:20:36.55:0,37,298	0/0:12,0:12:17.64:0,18,85	0/0:12,0:11:26.73:0,27,218	0/0:9,0:9:17.26:0,17,79	0/0:11,0:9:11.33:0,11,105
chr10	37653164	.	TC	T	1851.76	PASS	AB=0.867;AC=15;AF=0.278;AN=54;BaseQRankSum=3.454;DP=409;FS=6.525;HRun=2;HaplotypeScore=60.7685;InbreedingCoeff=0.9105;MQ=41.17;MQ0=41;MQRankSum=0.544;QD=12.18;ReadPosRankSum=-0.026;VQSLOD=1.8270;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:28,8:33:73.92:539,74,0	0/0:5,0:5:11.15:0,11,60	0/1:11,2:2:0:0,0,0	./.	0/0:13,0:10:19.97:0,20,153	1/1:15,3:18:48.74:324,49,0	1/1:15,6:21:62.35:492,62,0	0/0:14,0:12:27.22:0,27,192	0/0:13,0:13:31.69:0,32,223	1/1:2,10:12:20.86:163,21,0	1/1:7,9:16:8.62:80,9,0	0/0:13,0:11:18:0,18,163	0/0:10,0:10:17.10:0,17,103	0/0:17,0:17:39.29:0,39,212	1/1:19,3:19:32.75:266,33,0	0/0:8,0:6:11.78:0,12,85	0/0:22,0:22:38.52:0,39,316	1/1:2,12:12:15.04:177,15,0	0/0:12,0:12:7.58:0,8,154	0/0:13,0:8:22.32:0,22,141	0/0:11,0:10:14.54:0,15,88	0/0:8,0:7:12.32:0,12,69	0/0:8,0:8:14.84:0,15,109	0/0:19,0:19:26.94:0,27,226	0/0:12,0:12:22.53:0,23,119	0/0:12,0:11:26.73:0,27,210	0/0:9,0:9:22.40:0,22,112	0/0:12,0:10:17.83:0,18,132
chr10	37653379	.	CT	C	1197.77	PASS	AB=0.828;AC=10;AF=0.179;AN=56;BaseQRankSum=8.472;DP=614;FS=4.437;HRun=12;HaplotypeScore=68.2649;InbreedingCoeff=0.2387;MQ=68.91;MQ0=1;MQRankSum=0.740;QD=5.42;ReadPosRankSum=1.801;VQSLOD=2.0938;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:28:22.07:0,22,396	0/0:7,0:7:15.03:0,15,152	0/1:33,1:20:17.88:18,0,113	0/0:26,1:22:6.09:0,6,65	0/0:20,1:22:3.87:0,4,423	0/0:15,0:16:18.67:0,19,351	0/1:21,6:27:73.31:73,0,414	0/0:33,1:34:48.99:0,49,677	0/0:14,0:14:15.44:0,15,305	0/1:23,3:26:14.35:14,0,394	0/0:13,1:14:12.83:0,13,311	0/1:7,15:22:22.05:216,0,22	0/0:18,0:19:41.19:0,41,425	0/0:18,2:21:7.55:0,8,413	0/0:31,0:32:77.46:0,77,777	0/0:13,1:15:15.67:0,16,326	0/1:28,4:33:6:6,0,634	0/0:15,0:15:39.04:0,39,385	0/0:14,0:14:33.05:0,33,327	0/0:14,0:16:41.74:0,42,389	0/1:14,2:18:12.09:12,0,313	0/0:14,0:14:42.06:0,42,414	1/1:1,17:18:47.69:371,48,0	1/1:5,35:42:84.73:639,85,0	0/0:27,2:29:42.73:0,43,598	0/0:29,3:32:20.55:0,21,734	0/0:17,0:17:31.56:0,32,331	0/0:6,0:7:17.87:0,18,167
chr10	37654309	.	AAG	A	341.69	PASS	AB=0.944;AC=12;AF=0.214;AN=56;BaseQRankSum=-0.787;DP=376;FS=0.000;HRun=0;HaplotypeScore=55.4339;InbreedingCoeff=0.1050;MQ=68.94;MQ0=14;MQRankSum=-0.928;QD=2.59;ReadPosRankSum=0.132;VQSLOD=1.2278;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:26,2:27:47.50:47,0,322	0/0:9,0:9:10.94:0,11,130	0/0:40,0:12:12.11:0,12,156	0/0:41,0:14:20.52:0,21,187	0/0:16,0:16:42.60:0,43,392	0/1:10,1:11:56.57:57,0,75	0/0:7,0:7:8.33:0,8,53	0/0:13,0:10:14.11:0,14,98	0/0:7,0:7:18.02:0,18,242	0/1:11,0:11:25.01:25,0,104	0/1:10,1:10:23.87:24,0,65	0/0:3,0:3:3.47:0,3,10	0/0:9,0:9:22.64:0,23,205	0/0:2,0:2:2.97:0,3,20	0/1:21,1:22:63.52:64,0,141	0/0:13,0:13:21.01:0,21,287	0/0:26,0:25:68.95:0,69,855	0/1:20,1:21:37.92:38,0,151	0/0:6,0:6:17.78:0,18,123	0/0:15,0:14:28.92:0,29,228	0/1:8,0:7:2.41:2,0,85	0/0:2,0:2:3.48:0,3,49	0/1:6,1:7:6.88:8,0,7	0/0:10,0:9:8.22:0,8,64	0/0:12,0:12:29.34:0,29,185	1/1:2,5:6:9.81:83,10,0	0/0:13,0:13:11.97:0,12,173	1/1:3,3:6:12:145,12,0
chr10	37654310	.	AG	A	968.44	PASS	AB=0.957;AC=27;AF=0.500;AN=54;BaseQRankSum=-1.685;DP=387;FS=13.847;HRun=11;HaplotypeScore=52.1383;InbreedingCoeff=0.3307;MQ=68.03;MQ0=16;MQRankSum=-2.093;QD=4.66;ReadPosRankSum=-0.082;VQSLOD=0.1897;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:24,3:27:14.83:186,15,0	0/1:9,0:9:3.95:26,0,4	0/0:41,0:12:11.77:0,12,83	0/0:42,0:14:13.28:0,13,99	0/0:18,0:18:14.91:0,15,127	0/1:10,1:11:20.20:88,0,20	1/1:3,5:8:2.98:24,3,0	0/1:16,0:11:11.55:19,0,12	0/0:8,0:8:17.99:0,18,164	1/1:9,1:10:3.39:66,3,0	0/1:8,2:9:0.64:54,0,1	1/1:4,0:4:0.56:7,1,0	0/1:9,0:9:20.16:20,0,63	./.	1/1:16,5:21:28.79:198,29,0	0/0:11,0:11:12.03:0,12,126	0/0:26,0:25:53.87:0,54,478	1/1:15,7:22:29.73:219,30,0	0/0:5,0:5:1.77:0,2,4	0/1:17,1:18:4.57:5,0,82	1/1:8,0:7:5.96:44,6,0	0/0:2,0:2:3.01:0,3,30	1/1:6,0:6:2.15:14,2,0	0/0:10,0:9:6.87:0,7,50	0/0:12,0:12:4.21:0,4,11	1/1:9,0:7:9.63:52,10,0	0/1:12,0:12:25.04:46,0,25	1/1:6,0:6:11.68:71,12,0
chr10	37654417	.	AAG	A	247.80	PASS	AB=0.950;AC=14;AF=0.250;AN=56;BaseQRankSum=4.504;DP=492;FS=15.205;HRun=0;HaplotypeScore=90.7197;InbreedingCoeff=-0.3586;MQ=71.92;MQ0=28;MQRankSum=-1.088;QD=0.79;ReadPosRankSum=0.755;VQSLOD=0.4282;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:29:11.99:12,0,132	0/0:6,0:6:6.55:0,7,76	0/1:80,0:21:44.48:44,0,115	0/1:67,0:23:10.32:10,0,147	0/0:10,0:10:9.25:0,9,116	0/0:8,0:7:12.35:0,12,74	0/1:7,0:7:13.81:14,0,31	0/1:18,2:18:48.60:49,0,178	0/0:9,0:9:10.66:0,11,219	0/0:16,0:16:6.62:0,7,209	0/1:12,0:12:1.69:2,0,64	0/0:7,0:7:12.35:0,12,68	0/1:10,1:11:37.18:57,0,37	0/1:7,2:8:58.72:59,0,61	0/0:10,0:10:6.91:0,7,130	0/0:16,0:15:21.93:0,22,294	0/0:39,0:39:47.12:0,47,663	0/1:19,0:15:39.38:39,0,85	0/0:13,0:13:9.40:0,9,189	0/1:12,0:12:19.61:20,0,67	0/0:10,0:9:4.94:0,5,58	0/1:3,2:4:22.06:23,0,22	0/1:12,0:12:26.53:27,0,71	0/0:5,0:5:2.86:0,3,17	0/1:13,0:11:24.25:25,0,24	0/0:17,0:16:29.81:0,30,245	0/1:17,1:17:13.90:14,0,140	0/0:11,0:11:23.48:0,23,270
chr10	37655583	.	C	CT	922.26	PASS	AB=0.596;AC=3;AF=0.054;AN=56;BaseQRankSum=-5.320;DP=605;FS=3.113;HRun=9;HaplotypeScore=61.9579;InbreedingCoeff=0.7578;MQ=68.42;MQ0=0;MQRankSum=-0.022;QD=18.45;ReadPosRankSum=-0.147;VQSLOD=3.7811;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:98.88:0,99,843	0/0:12,0:12:29.98:0,30,258	0/0:11,0:11:24.46:0,24,209	0/0:8,0:8:18.47:0,18,157	0/0:18,0:18:41.98:0,42,362	0/0:20,0:20:50.97:0,51,443	0/0:38,0:38:95.91:0,96,822	0/0:26,0:26:62.98:0,63,547	0/0:11,0:11:26.96:0,27,230	0/0:28,0:28:77.77:0,78,662	0/0:9,0:10:27.47:0,27,235	0/0:23,0:23:68.95:0,69,593	0/0:21,0:21:53.96:0,54,469	0/0:23,0:23:56.94:0,57,491	0/0:29,0:29:71.95:0,72,620	0/0:18,0:18:47.94:0,48,411	0/0:24,0:24:65.93:0,66,564	0/0:25,0:25:65.93:0,66,563	0/0:32,0:32:71.94:0,72,622	0/0:19,0:19:47.98:0,48,417	0/0:32,0:32:74.94:0,75,651	0/0:8,0:8:17.98:0,18,153	0/0:9,0:9:20.96:0,21,177	0/0:26,1:27:32.77:0,33,508	0/0:17,0:17:35.86:0,36,312	0/1:11,23:34:3.94:665,0,4	0/0:30,0:30:74.92:0,75,639	1/1:2,13:16:35.85:363,36,0
chr10	37657894	.	C	CACACAT	1028.78	PASS	AB=0.880;AC=11;AF=0.204;AN=54;BaseQRankSum=-2.319;DP=549;FS=4.187;HRun=0;HaplotypeScore=130.2862;InbreedingCoeff=0.2723;MQ=41.38;MQ0=45;MQRankSum=-1.525;QD=5.98;ReadPosRankSum=-1.788;VQSLOD=2.3222;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:24:5.99:0,6,48	0/1:2,9:11:0:0,0,0	0/0:14,0:4:11.98:0,12,126	0/0:12,0:3:2.23:0,2,25	0/0:27,0:22:39.01:0,39,608	0/0:23,0:21:20.67:0,21,200	0/0:17,0:15:2.98:0,3,22	0/1:39,0:37:99:103,0,319	0/0:7,0:7:18.06:0,18,377	0/0:24,0:22:24.22:0,24,272	./.	0/0:18,0:16:2.84:0,3,66	0/0:5,0:15:5.44:0,5,29	0/1:19,0:18:22.06:108,0,22	0/0:17,0:17:8.84:0,9,121	0/0:18,0:16:33.06:0,33,566	0/0:27,0:22:39.35:0,39,669	0/0:17,0:14:17.87:0,18,187	0/1:11,0:8:22.09:147,0,22	0/0:12,13:25:3.50:0,4,103	1/1:15,0:8:8.97:115,9,0	1/1:6,0:20:1.25:3,1,0	0/0:17,0:16:3.39:0,3,25	0/0:17,0:12:2.89:0,3,24	0/1:25,0:23:4.29:141,0,4	0/0:26,0:23:68.58:0,69,811	1/1:27,0:26:15.35:547,15,0	0/0:10,0:10:14.97:0,15,244
chr10	37657902	.	CACACACACACACACACAGAG	C	1641	PASS	AB=0.972;AC=7;AF=0.130;AN=54;BaseQRankSum=5.745;DP=583;FS=0.788;HRun=0;HaplotypeScore=208.2539;InbreedingCoeff=0.2372;MQ=43.93;MQ0=44;MQRankSum=0.252;QD=17.09;ReadPosRankSum=1.793;VQSLOD=2.5832;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:11,19:27:6.02:0,6,96	0/0:13,0:12:3.48:0,3,73	0/0:20,0:7:20.74:0,21,622	0/0:15,0:4:10.59:0,11,295	0/0:28,0:24:48:0,48,2988	0/1:20,2:19:34.33:238,0,34	1/1:17,0:15:2.92:17,3,0	0/0:47,0:45:99:0,135,4549	0/0:6,0:6:18.06:0,18,1556	0/1:26,0:24:31.86:952,0,32	./.	0/0:18,0:16:3.48:0,3,115	0/0:14,0:13:5.81:0,6,62	0/0:19,0:18:12.04:0,12,587	1/1:15,1:16:6.49:306,6,0	0/0:19,0:17:39.13:0,39,2435	0/0:28,0:23:57.17:0,57,2997	0/1:15,0:13:61.34:250,0,61	0/0:15,0:11:33.11:0,33,1242	0/0:27,0:26:30.03:0,30,749	0/0:18,0:12:17.31:0,17,835	0/0:24,0:23:12.92:0,13,240	0/0:19,0:18:4.49:0,4,87	0/0:15,0:11:3.48:0,3,72	0/0:26,0:22:29.79:0,30,1692	0/0:27,0:24:69.18:0,69,3575	0/0:29,0:28:62.24:0,62,3205	0/0:12,0:11:19.88:0,20,887
chr10	37657904	.	CACACACACACACACAGAG	C	1958.79	PASS	AB=0.913;AC=9;AF=0.167;AN=54;BaseQRankSum=5.539;DP=579;FS=1.698;HRun=0;HaplotypeScore=195.9781;InbreedingCoeff=0.5292;MQ=45.27;MQ0=43;MQRankSum=0.018;QD=22.01;ReadPosRankSum=1.234;VQSLOD=2.8429;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:27:5.99:0,6,50	0/0:13,0:12:3.48:0,3,50	0/0:20,0:7:20.74:0,21,518	0/0:16,0:5:1.57:0,2,233	0/0:28,0:24:48.08:0,48,2637	0/1:19,1:18:9.43:284,0,9	1/1:4,11:13:3.01:42,3,0	0/0:47,0:45:99:0,132,3828	0/0:6,0:6:18.06:0,18,1406	1/1:4,22:24:18.41:1150,18,0	./.	0/0:18,0:16:3.48:0,3,89	0/0:14,0:13:3.01:0,3,49	0/0:19,0:18:12.04:0,12,525	1/1:3,11:14:6.49:308,6,0	0/0:19,0:17:39.13:0,39,2161	0/0:28,0:23:57.17:0,57,2706	1/1:4,9:12:5.94:313,6,0	0/0:16,0:11:33.11:0,33,1089	0/0:26,0:25:28.84:0,29,625	0/0:18,0:12:17.15:0,17,751	0/0:24,0:23:12.92:0,13,225	0/0:19,0:18:1.73:0,2,68	0/0:16,0:12:3.48:0,3,70	0/0:26,0:22:29.93:0,30,1521	0/0:29,0:26:71.73:0,72,3202	0/0:29,0:28:61.55:0,62,2852	0/0:12,0:11:19.88:0,20,787
chr10	37657910	.	CACACACACAGAG	C	1408.72	PASS	AB=1.000;AC=11;AF=0.204;AN=54;BaseQRankSum=6.430;DP=558;FS=0.780;HRun=0;HaplotypeScore=160.0118;InbreedingCoeff=0.6472;MQ=46.45;MQ0=39;MQRankSum=0.234;QD=15.31;ReadPosRankSum=1.086;VQSLOD=2.7690;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:26:2.88:0,3,15	0/0:13,0:12:3.01:0,3,50	0/0:20,0:7:16.51:0,17,340	0/0:16,0:5:0.90:0,1,140	0/0:27,0:24:50.74:0,51,1888	1/1:8,8:13:9.03:254,9,0	1/1:13,0:12:3.01:42,3,0	0/0:48,0:47:99:0,138,3053	0/0:7,0:7:21.07:0,21,1015	1/1:25,0:23:46.45:863,46,0	./.	0/1:16,0:14:0.14:0,0,0	0/0:13,0:13:6.02:0,6,99	0/0:20,0:19:18.06:0,18,432	1/1:12,0:12:5.84:200,6,0	0/0:16,0:14:37.37:0,37,1447	0/0:26,0:21:54.14:0,54,1824	1/1:10,0:9:6.02:194,6,0	0/0:19,0:14:41.35:0,41,975	0/0:24,0:23:24.01:0,24,491	0/0:20,0:14:20.45:0,20,620	0/0:22,0:21:12.92:0,13,181	0/0:19,0:18:1.79:0,2,46	0/0:15,0:11:3.01:0,3,46	0/0:26,0:22:32.66:0,33,1019	0/0:29,0:26:70.47:0,70,2051	0/0:29,0:28:61.04:0,61,1819	0/0:12,0:11:19.81:0,20,467
chr10	37657924	.	GAGAC	G	336.19	PASS	AB=0.851;AC=11;AF=0.196;AN=56;BaseQRankSum=7.350;DP=539;FS=2.654;HRun=0;HaplotypeScore=117.3744;InbreedingCoeff=0.5056;MQ=52.88;MQ0=27;MQRankSum=-0.977;QD=3.06;ReadPosRankSum=2.131;VQSLOD=1.9495;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:24:2.99:0,3,24	0/0:13,0:12:3.01:0,3,71	0/0:26,0:11:26.44:0,26,406	0/0:20,0:7:11.87:0,12,204	0/0:30,0:27:55.61:0,56,1398	0/1:17,0:15:43.69:44,0,53	1/1:12,0:12:3:25,3,0	0/0:35,0:35:99:0,105,2170	0/0:10,0:10:30.09:0,30,671	1/1:24,0:22:24.25:277,24,0	0/0:17,0:15:3:0,3,25	1/1:2,15:17:3.01:59,3,0	0/0:13,0:13:9.03:0,9,217	0/0:13,0:13:18.02:0,18,344	1/1:13,0:13:5.95:42,6,0	0/0:18,0:16:37:0,37,987	0/0:25,0:21:56.49:0,56,1105	0/1:11,0:11:15.06:30,0,15	0/0:19,0:17:51.16:0,51,1212	0/0:25,0:25:36.04:0,36,677	0/0:21,0:16:30.03:0,30,666	0/0:19,0:19:12.01:0,12,242	0/1:3,13:15:0:1,0,0	0/0:2,10:10:0:0,0,0	0/0:20,0:16:32.90:0,33,813	0/0:27,0:25:68.92:0,69,1410	0/0:24,0:24:63.18:0,63,1364	0/0:16,0:15:29.22:0,29,655
chr10	37658113	.	T	TA	665.43	PASS	AB=0.933;AC=10;AF=0.179;AN=56;BaseQRankSum=-0.410;DP=604;FS=7.524;HRun=13;HaplotypeScore=72.0554;InbreedingCoeff=0.4931;MQ=70.47;MQ0=3;MQRankSum=0.757;QD=4.93;ReadPosRankSum=-1.490;VQSLOD=1.5051;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,1:42:9.31:0,9,483	0/0:5,0:5:11.86:0,12,82	0/0:23,0:16:23.12:0,23,135	0/1:20,0:14:6.21:6,0,36	0/0:24,0:24:44.21:0,44,304	0/0:19,0:24:56.67:0,57,367	0/1:11,1:12:7.09:7,0,102	0/0:41,1:43:62.34:0,62,417	0/0:10,0:11:24.97:0,25,166	0/0:32,0:32:61.63:0,62,411	0/0:15,1:18:8.80:0,9,184	1/1:5,27:33:41.88:375,42,0	0/0:17,1:21:10.61:0,11,207	0/0:15,0:17:29.09:0,29,237	0/0:21,0:23:42.01:0,42,277	0/1:18,2:20:5.57:6,0,241	0/0:18,0:18:34.87:0,35,232	0/0:10,0:10:23.78:0,24,164	0/0:17,1:17:4.86:0,5,177	0/0:31,0:32:72.73:0,73,454	0/0:20,0:22:45.56:0,46,295	0/0:14,0:14:14.92:0,15,180	1/1:9,2:12:6.80:140,7,0	1/1:3,16:20:15.31:272,15,0	0/0:12,0:13:28.66:0,29,186	0/0:22,0:24:49.44:0,49,330	0/0:33,1:35:29.01:0,29,448	0/1:16,2:18:5.09:5,0,257
chr10	37658727	.	G	GA	1864.82	PASS	AB=0.897;AC=26;AF=0.464;AN=56;BaseQRankSum=-0.218;DP=524;FS=5.311;HRun=12;HaplotypeScore=97.8359;InbreedingCoeff=0.4322;MQ=70.53;MQ0=3;MQRankSum=-4.080;QD=7.40;ReadPosRankSum=-4.410;VQSLOD=1.7545;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,1:28:34.10:0,34,241	1/1:5,3:8:13.23:110,13,0	0/0:32,0:17:10.49:0,10,52	0/0:35,0:18:6.50:0,7,37	0/1:19,4:24:13.91:14,0,168	0/1:13,1:14:29.10:29,0,76	0/0:9,0:10:13.93:0,14,93	1/1:15,9:23:40.20:351,40,0	0/1:9,0:9:1.11:1,0,110	0/1:19,1:20:2.37:2,0,148	0/0:22,1:23:38.60:0,39,283	0/1:11,1:13:4.24:4,0,118	0/1:8,3:11:28.81:68,0,29	1/1:6,5:11:23.98:219,24,0	0/0:25,0:25:40.30:0,40,290	0/1:5,2:7:15.90:23,0,16	0/0:31,1:32:33.30:0,33,407	0/0:27,1:28:27.39:0,27,364	1/1:11,5:16:20.95:186,21,0	1/1:15,5:21:16.90:284,17,0	1/1:9,3:12:21.48:190,21,0	1/1:10,0:10:5.95:45,6,0	0/1:14,1:16:31.69:32,0,108	0/0:21,0:22:45.29:0,45,316	1/1:11,7:19:28.64:327,29,0	0/0:24,0:24:10.32:0,10,188	1/1:11,5:16:20.69:174,21,0	0/0:10,0:10:2.90:0,3,22
chr10	37658761	.	GA	G	6349.24	PASS	AB=0.600;AC=43;AF=0.768;AN=56;BaseQRankSum=4.064;DP=511;FS=1.545;HRun=10;HaplotypeScore=72.6250;InbreedingCoeff=0.9226;MQ=75.14;MQ0=2;MQRankSum=-1.045;QD=17.69;ReadPosRankSum=3.538;VQSLOD=5.6449;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,24:31:37.21:470,37,0	1/1:1,5:6:15:130,15,0	0/0:38,0:18:18.91:0,19,162	0/0:38,0:19:10.58:0,11,142	0/0:21,0:21:42.11:0,42,459	1/1:3,16:19:41.97:362,42,0	1/1:4,9:13:21.45:184,21,0	1/1:14,17:30:61.21:513,61,0	0/0:11,0:11:33.08:0,33,357	1/1:4,8:12:23.99:208,24,0	1/1:5,5:10:14.92:122,15,0	1/1:4,9:13:29.93:252,30,0	1/1:0,8:8:24:208,24,0	1/1:2,7:9:23.99:208,24,0	1/1:4,24:28:37.79:495,38,0	0/0:10,0:10:24.05:0,24,258	0/0:33,1:34:61.20:0,61,873	1/1:6,20:26:53.91:461,54,0	0/1:5,10:15:0.19:227,0,0	1/1:8,11:19:37.11:305,37,0	1/1:1,9:10:24:208,24,0	1/1:2,6:8:17.99:156,18,0	1/1:5,7:12:23.90:207,24,0	1/1:3,18:21:44.97:391,45,0	1/1:7,10:17:14.67:283,15,0	1/1:9,17:26:47.69:536,48,0	1/1:4,9:14:25.81:214,26,0	1/1:0,11:11:24:208,24,0
chr10	37662870	.	C	CG	1728.90	PASS	AB=0.933;AC=5;AF=0.089;AN=56;BaseQRankSum=-4.042;DP=574;FS=3.986;HRun=4;HaplotypeScore=62.7879;InbreedingCoeff=0.7551;MQ=61.01;MQ0=4;MQRankSum=3.236;QD=23.68;ReadPosRankSum=-0.525;VQSLOD=2.4798;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,120,1305	0/0:8,0:8:18.04:0,18,196	0/0:6,0:6:8.31:0,8,68	0/1:13,1:13:24.78:25,0,78	0/0:22,0:22:57.09:0,57,616	0/0:13,0:13:35.92:0,36,378	0/0:23,0:23:57:0,57,599	0/0:19,0:17:48.01:0,48,480	0/0:14,0:14:36.06:0,36,393	0/0:18,0:18:51.07:0,51,522	0/0:21,0:21:60.15:0,60,660	0/0:18,0:18:51.13:0,51,560	0/0:12,0:12:27.06:0,27,294	0/0:16,0:16:45:0,45,477	0/0:22,0:22:63.08:0,63,672	0/0:19,0:19:54.08:0,54,587	0/0:25,0:25:69.03:0,69,723	0/0:26,0:26:75.08:0,75,804	0/0:20,0:17:45.05:0,45,462	0/0:16,0:16:36.96:0,37,434	0/0:20,0:20:45.06:0,45,484	0/0:23,0:23:44.07:0,44,628	0/0:18,0:18:45.12:0,45,501	0/0:39,0:39:90.21:0,90,1111	0/0:18,0:18:40.15:0,40,501	1/1:7,27:33:50.58:993,51,0	0/0:20,0:20:40.09:0,40,485	1/1:0,24:25:63.19:840,63,0
chr10	37662874	.	G	GA	515.82	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=8.359;DP=588;FS=5.168;HRun=9;HaplotypeScore=67.5687;InbreedingCoeff=0.7496;MQ=61.79;MQ0=5;MQRankSum=0.591;QD=7.48;ReadPosRankSum=0.427;VQSLOD=1.4259;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,111,952	0/0:8,0:8:20.96:0,21,175	0/0:10,0:7:17.55:0,18,130	0/1:16,0:15:9.31:9,0,84	0/0:24,0:24:62.80:0,63,521	0/0:15,0:15:41.86:0,42,345	0/0:26,0:26:53.94:0,54,459	0/0:24,0:22:41.94:0,42,358	0/0:12,0:12:35.99:0,36,312	0/0:19,0:19:41.95:0,42,357	0/0:22,0:22:56.48:0,56,478	0/0:17,0:17:44.99:0,45,390	0/0:16,0:16:29.91:0,30,250	0/0:17,0:18:49.99:0,50,414	0/0:23,0:23:56.07:0,56,493	0/0:20,0:20:53.96:0,54,462	0/0:23,0:24:62.01:0,62,526	0/0:28,0:28:74.95:0,75,644	0/0:22,0:19:35.32:0,35,288	0/0:16,1:17:5.80:0,6,279	0/0:16,0:16:38.99:0,39,338	0/0:21,1:22:24.17:0,24,433	0/0:17,0:17:47.95:0,48,406	0/0:38,0:38:98.16:0,98,835	0/0:17,1:18:20.29:0,20,390	1/1:28,0:28:45.40:351,45,0	0/0:19,1:20:14.76:0,15,353	1/1:25,0:25:37.70:283,38,0
chr10	37662968	.	C	CAA	6249.73	PASS	AB=0.541;AC=43;AF=0.827;AN=52;BaseQRankSum=1.372;DP=540;FS=19.239;HRun=12;HaplotypeScore=93.7525;InbreedingCoeff=0.7856;MQ=39.21;MQ0=36;MQRankSum=-2.729;QD=14.74;ReadPosRankSum=0.895;VQSLOD=1.9478;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,20:31:23.05:256,23,0	1/1:3,8:14:20.04:227,20,0	./.	./.	0/0:25,0:27:32.85:0,33,325	1/1:5,9:16:17.52:200,18,0	1/1:2,12:15:5.97:62,6,0	1/1:11,12:20:35.08:405,35,0	0/0:13,0:13:20.74:0,21,168	1/1:3,10:15:35.58:427,36,0	1/1:5,16:22:29.82:366,30,0	1/1:10,1:17:24.91:268,25,0	1/1:21,8:28:41.55:451,42,0	1/1:17,5:22:30.10:294,30,0	0/1:3,15:20:4.20:237,0,4	0/0:19,0:20:35.56:0,36,311	0/0:29,0:31:18.36:0,18,200	1/1:6,16:20:9.03:123,9,0	1/1:8,6:16:27.94:303,28,0	1/1:15,12:27:60.04:747,60,0	1/1:0,4:4:3.01:42,3,0	1/1:10,7:19:14.99:172,15,0	1/1:10,1:19:32.96:307,33,0	1/1:7,0:12:20.15:212,20,0	1/1:5,4:11:6.02:85,6,0	1/1:12,0:20:47.73:402,48,0	1/1:21,6:25:43.40:442,43,0	1/1:8,0:10:21.03:222,21,0
chr10	37663032	.	CA	C	5194.03	PASS	AB=0.754;AC=30;AF=0.536;AN=56;BaseQRankSum=7.531;DP=541;FS=7.969;HRun=9;HaplotypeScore=75.4892;InbreedingCoeff=0.8632;MQ=57.33;MQ0=19;MQRankSum=-1.475;QD=18.62;ReadPosRankSum=0.099;VQSLOD=4.7996;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:73.06:0,73,816	1/1:3,5:8:18:163,18,0	0/0:18,0:5:15:0,15,148	0/0:15,2:7:6.02:0,6,70	0/0:32,0:32:81.23:0,81,923	0/0:19,0:19:48.10:0,48,529	0/0:17,0:17:36.11:0,36,415	1/1:5,22:27:66.01:596,66,0	0/0:17,0:17:48.05:0,48,530	0/0:17,0:16:45.11:0,45,496	0/0:18,0:17:48.14:0,48,546	1/1:2,19:21:60.02:544,60,0	1/1:2,15:17:32.99:293,33,0	1/1:5,9:14:29.88:260,30,0	0/0:18,0:18:38.94:0,39,401	0/0:23,0:23:60.17:0,60,682	0/0:32,0:32:81.21:0,81,907	0/1:17,1:17:7.59:8,0,323	1/1:3,11:13:30.02:274,30,0	1/1:6,20:26:56.34:518,56,0	1/1:0,13:11:23.61:202,24,0	1/1:3,15:18:39.01:356,39,0	1/1:3,18:21:40:404,40,0	0/1:3,11:14:4.98:199,0,5	1/1:1,18:19:47.81:439,48,0	1/1:11,13:24:50.91:449,51,0	1/1:3,15:18:16.43:325,16,0	1/1:3,4:7:18.01:165,18,0
chr10	37664929	.	GA	G	2601.80	PASS	AB=0.724;AC=35;AF=0.625;AN=56;BaseQRankSum=2.298;DP=588;FS=4.397;HRun=16;HaplotypeScore=78.3182;InbreedingCoeff=0.4275;MQ=81.97;MQ0=9;MQRankSum=-0.046;QD=5.77;ReadPosRankSum=2.615;VQSLOD=2.9894;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,22:34:20.23:284,20,0	1/1:1,9:11:6.30:94,6,0	0/1:43,0:29:3.03:3,0,51	0/1:32,0:15:4.92:5,0,27	0/0:15,0:21:42.26:0,42,298	1/1:5,9:14:8.45:141,8,0	0/1:3,9:14:0.50:95,0,0	1/1:9,18:32:25.96:283,26,0	0/0:18,1:19:20.93:0,21,279	1/1:7,19:28:23.90:274,24,0	1/1:5,9:14:17.53:108,18,0	0/0:19,0:20:30.71:0,31,278	1/1:7,9:17:0.33:106,0,0	1/1:5,10:16:0.38:105,0,0	1/1:7,14:21:16.03:208,16,0	0/0:18,1:20:34.21:0,34,362	0/0:19,1:23:13.11:0,13,257	1/1:2,11:13:4.30:136,4,0	0/1:9,8:19:21.03:80,0,21	0/1:7,10:16:2.01:102,0,2	1/1:6,17:27:43.33:239,43,0	1/1:5,13:19:37.50:218,37,0	0/0:18,2:21:2.15:0,2,237	0/0:10,1:13:17.52:0,18,222	0/1:7,9:16:21.08:58,0,21	1/1:9,0:19:18.18:53,18,0	0/1:8,16:25:38.17:130,0,38	1/1:4,1:18:19.18:65,19,0
chr10	37667336	.	AT	A	4296.86	PASS	AB=0.633;AC=38;AF=0.679;AN=56;BaseQRankSum=2.404;DP=476;FS=2.678;HRun=10;HaplotypeScore=62.3182;InbreedingCoeff=0.7728;MQ=73.46;MQ0=8;MQRankSum=1.130;QD=13.95;ReadPosRankSum=1.070;VQSLOD=5.0562;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,35:40:53.84:553,54,0	1/1:6,1:7:11.95:97,12,0	0/0:26,0:12:16.45:0,16,101	0/0:22,0:9:5.85:0,6,45	0/0:19,1:19:13.05:0,13,369	1/1:2,9:11:17.99:156,18,0	1/1:2,8:10:20.67:167,21,0	1/1:6,19:25:49.88:447,50,0	0/0:9,0:9:24.06:0,24,265	1/1:2,16:18:41.99:364,42,0	1/1:2,10:12:23.98:207,24,0	1/1:2,17:19:20.99:180,21,0	0/1:4,6:9:4.94:110,0,5	1/1:2,10:12:15:130,15,0	1/1:1,13:14:14.03:110,14,0	0/0:13,0:13:35.92:0,36,371	0/0:30,0:30:68.46:0,68,677	0/1:7,9:16:16.05:172,0,16	1/1:9,14:23:23.50:352,24,0	1/1:1,10:11:26.99:233,27,0	1/1:5,11:15:12.02:187,12,0	1/1:3,1:4:3:26,3,0	1/1:2,2:4:5.99:52,6,0	1/1:3,14:15:20.83:182,21,0	1/1:13,7:20:47.71:388,48,0	0/0:26,0:26:63.16:0,63,688	1/1:4,15:19:20.99:182,21,0	0/0:22,0:21:42.10:0,42,450
chr10	37670282	.	AT	A	3548.99	PASS	AB=1.000;AC=43;AF=0.796;AN=54;BaseQRankSum=2.621;DP=265;FS=2.437;HRun=6;HaplotypeScore=60.5681;InbreedingCoeff=0.4412;MQ=64.73;MQ0=2;MQRankSum=-2.594;QD=15.04;ReadPosRankSum=-0.341;VQSLOD=3.1281;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:11,14:25:59.54:477,60,0	1/1:5,0:5:14.84:106,15,0	0/0:12,1:8:2.30:0,2,60	0/0:7,0:5:11.88:0,12,105	0/1:9,0:9:10.30:10,0,29	1/1:4,12:16:38.32:313,38,0	1/1:2,1:3:5.96:44,6,0	1/1:36,0:36:88.14:535,88,0	0/0:3,0:3:7.41:0,7,27	1/1:6,13:19:53.39:453,53,0	1/1:1,5:6:17.97:152,18,0	0/1:9,0:9:19.34:54,0,19	1/1:4,0:4:11.69:68,12,0	1/1:5,0:5:11.70:68,12,0	1/1:3,6:9:26.82:218,27,0	0/0:5,0:5:5.09:0,5,18	0/1:17,0:17:31.53:32,0,71	1/1:7,6:13:29.73:258,30,0	1/1:10,0:10:23.16:138,23,0	1/1:4,0:4:11.69:68,12,0	1/1:1,0:1:2.90:16,3,0	./.	1/1:4,0:4:5.86:35,6,0	1/1:4,0:4:5.88:35,6,0	1/1:12,0:12:35.22:219,35,0	1/1:6,0:6:6.77:43,7,0	1/1:9,0:9:23.22:138,23,0	1/1:9,0:9:18.70:69,19,0
chr10	37670287	.	TTA	T	6831.85	PASS	AB=0.976;AC=42;AF=0.778;AN=54;BaseQRankSum=-1.825;DP=263;FS=1.413;HRun=0;HaplotypeScore=56.0080;InbreedingCoeff=0.3056;MQ=64.94;MQ0=2;MQRankSum=-2.618;QD=27.77;ReadPosRankSum=0.312;VQSLOD=5.2252;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:24,2:26:62.66:693,63,0	1/1:3,2:5:15.01:185,15,0	0/1:10,0:5:8.96:9,0,52	0/0:10,0:6:11.82:0,12,144	0/1:7,0:7:7.83:8,0,100	1/1:12,5:17:39.12:468,39,0	1/1:2,0:2:5.98:55,6,0	1/1:13,20:33:99:1445,99,0	0/0:4,0:4:5.94:0,6,47	1/1:20,1:21:61.84:707,62,0	1/1:8,0:8:20.64:215,21,0	0/1:5,1:6:28.07:82,0,28	1/1:1,3:4:12.04:183,12,0	1/1:1,4:5:15.04:209,15,0	1/1:10,0:10:29.67:349,30,0	0/0:3,0:3:5.98:0,6,47	0/1:18,0:18:18.69:19,0,290	1/1:13,1:14:30.07:376,30,0	1/1:3,5:8:24.07:340,24,0	1/1:3,3:6:18.03:232,18,0	1/1:0,1:1:3.01:45,3,0	./.	1/1:0,3:3:5.91:92,6,0	1/1:1,2:3:6.02:93,6,0	1/1:4,8:12:36.11:531,36,0	0/1:6,0:6:3.33:49,0,3	1/1:5,5:9:27.08:384,27,0	0/1:11,0:11:1.11:63,0,1
chr10	37670294	.	AAAT	A	2874.71	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=-5.439;DP=277;FS=0.000;HRun=0;HaplotypeScore=73.6906;InbreedingCoeff=0.6740;MQ=64.77;MQ0=2;MQRankSum=-1.088;QD=20.68;ReadPosRankSum=1.503;VQSLOD=3.0497;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,18:23:50.57:678,51,0	0/0:5,0:5:2.71:0,3,99	0/0:10,0:5:14.13:0,14,123	0/0:10,0:6:7.58:0,8,107	0/0:7,0:7:21.05:0,21,386	1/1:5,12:17:37.94:508,38,0	1/1:0,1:1:3.01:40,3,0	0/1:40,0:40:2.02:2,0,732	0/0:4,0:4:12.03:0,12,184	1/1:3,20:23:67.87:848,68,0	1/1:0,9:9:26.95:315,27,0	0/0:4,0:4:3:0,3,26	0/0:6,0:6:5.30:0,5,94	0/0:5,0:5:14.63:0,15,92	1/1:2,8:10:26.71:333,27,0	0/0:3,0:3:6.02:0,6,135	0/0:17,0:17:51.05:0,51,1034	1/1:4,12:16:26.16:331,26,0	0/0:9,0:9:17.47:0,17,185	0/0:7,0:7:8.01:0,8,124	0/0:1,0:1:2.88:0,3,15	0/0:1,0:1:3.01:0,3,50	0/0:5,0:5:14.86:0,15,114	0/0:3,0:3:5.99:0,6,48	0/0:12,0:12:21.95:0,22,250	0/0:7,0:7:7.04:0,7,228	0/0:11,0:10:3.38:0,3,186	0/0:11,0:11:33.08:0,33,423
chr10	37670328	.	TTG	T	4511.93	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=3.033;DP=336;FS=8.125;HRun=0;HaplotypeScore=63.5951;InbreedingCoeff=0.9217;MQ=69.89;MQ0=0;MQRankSum=-3.294;QD=34.71;ReadPosRankSum=-0.622;VQSLOD=6.6718;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:20:45.12:0,45,794	1/1:1,6:7:12.04:176,12,0	0/0:7,0:7:18.06:0,18,325	0/0:6,0:5:12.04:0,12,225	0/0:16,0:16:24.08:0,24,435	0/0:18,0:18:36.12:0,36,667	0/0:3,0:3:8.98:0,9,131	1/1:4,41:45:99:1670,120,0	0/0:6,0:6:18.06:0,18,337	0/0:17,0:17:24.08:0,24,449	0/0:13,0:13:27.09:0,27,490	0/0:7,0:7:21.05:0,21,361	1/1:2,10:12:27.09:397,27,0	1/1:0,7:7:21.07:309,21,0	0/0:15,0:15:42.14:0,42,780	0/0:8,0:8:24.08:0,24,449	0/0:13,0:13:36.10:0,36,630	0/0:16,0:16:33.11:0,33,618	1/1:1,8:9:24.08:353,24,0	1/1:3,13:16:36.01:458,36,0	1/1:0,5:5:12.04:176,12,0	1/1:2,2:4:3.01:44,3,0	0/0:9,0:9:9.03:0,9,169	0/0:2,0:2:6.02:0,6,112	1/1:1,8:9:21.07:309,21,0	0/0:14,0:14:39.11:0,39,668	1/1:0,16:16:42.14:618,42,0	0/0:15,0:15:39.13:0,39,715
chr10	37670329	.	TG	T	672.15	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=7.550;DP=324;FS=9.150;HRun=1;HaplotypeScore=65.0825;InbreedingCoeff=0.8573;MQ=71.02;MQ0=0;MQRankSum=-1.933;QD=5.21;ReadPosRankSum=-0.167;VQSLOD=-0.3212;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:19:48.11:0,48,700	1/1:7,0:7:9.49:32,9,0	0/0:6,0:6:18.06:0,18,271	0/0:5,0:5:12.04:0,12,192	0/0:14,0:14:10.09:0,10,364	0/0:17,0:17:36.12:0,36,570	0/0:3,0:3:8.98:0,9,114	1/1:44,0:44:66.54:307,67,0	0/0:6,0:6:18.06:0,18,287	0/0:14,0:14:27.08:0,27,410	0/0:13,0:13:30.05:0,30,427	0/0:7,0:7:21.05:0,21,311	1/1:11,1:12:21.57:76,22,0	1/1:7,0:7:16.60:57,17,0	0/0:15,0:15:42.14:0,42,668	0/0:8,0:8:24.08:0,24,383	0/0:13,0:13:39.09:0,39,568	0/0:16,0:16:33.11:0,33,527	0/1:9,0:9:1.75:44,0,2	1/1:14,2:16:30.77:142,31,0	1/1:5,0:5:9.79:36,10,0	1/1:3,1:4:2.37:8,2,0	0/0:8,0:8:8.87:0,9,144	0/0:2,0:2:6.02:0,6,96	1/1:9,0:9:16.60:57,17,0	0/0:13,0:13:39.10:0,39,575	1/1:16,0:16:33.20:114,33,0	0/0:15,0:15:42.13:0,42,639
chr10	37676603	.	T	TG	14589.39	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-11.056;DP=543;FS=5.283;HRun=0;HaplotypeScore=55.6952;InbreedingCoeff=0.9954;MQ=69.10;MQ0=0;MQRankSum=-1.043;QD=35.07;ReadPosRankSum=1.929;VQSLOD=4.2440;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,17:18:41.73:540,42,0	1/1:0,10:10:30.10:408,30,0	0/0:28,0:18:26.03:0,26,289	0/0:21,0:14:23.50:0,24,230	0/0:18,0:18:48.91:0,49,666	1/1:0,24:24:69.23:939,69,0	1/1:0,13:13:33.11:448,33,0	1/1:0,24:24:66.08:829,66,0	0/0:15,0:15:45.14:0,45,611	1/1:2,31:33:96.26:1270,96,0	1/1:0,22:22:66.22:892,66,0	1/1:0,19:19:48.16:653,48,0	1/1:0,18:18:33.03:449,33,0	1/1:0,23:23:54.18:735,54,0	1/1:0,15:15:42.14:572,42,0	0/0:14,0:14:42.13:0,42,570	0/0:31,0:31:87.16:0,87,1113	1/1:1,18:19:45.15:610,45,0	1/1:0,20:20:60.11:713,60,0	1/1:0,16:16:38.85:459,39,0	1/1:0,10:10:24.08:327,24,0	1/1:0,21:21:59.93:745,60,0	1/1:1,17:18:48.04:628,48,0	1/1:0,7:7:15.05:204,15,0	1/1:1,16:17:45.13:613,45,0	1/1:0,20:20:60.19:801,60,0	1/1:0,36:36:93.31:1265,93,0	1/1:0,13:13:36.12:489,36,0
chr10	37677280	.	T	TG	175.75	PASS	AB=0.952;AC=5;AF=0.089;AN=56;BaseQRankSum=5.046;DP=654;FS=12.773;HRun=0;HaplotypeScore=124.7914;InbreedingCoeff=0.7563;MQ=60.82;MQ0=14;MQRankSum=-3.944;QD=3.32;ReadPosRankSum=1.506;VQSLOD=2.8680;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:19,1:20:8.34:8,0,139	0/0:6,0:6:18.01:0,18,166	0/0:54,0:13:21.59:0,22,152	0/0:33,0:15:13.95:0,14,144	0/0:31,0:30:71.74:0,72,651	0/0:16,0:16:39.37:0,39,210	0/0:13,1:14:27.09:0,27,172	0/0:36,0:36:99:0,105,923	0/0:17,0:16:46.46:0,46,407	0/0:27,3:30:15.70:0,16,253	0/0:28,2:30:32.57:0,33,315	0/0:32,0:32:79.47:0,79,630	0/0:23,0:23:63.02:0,63,597	0/0:17,0:16:48.03:0,48,463	0/0:24,0:24:60.97:0,61,314	0/0:16,0:16:38.46:0,38,354	0/0:21,0:21:59.96:0,60,565	0/0:9,0:9:16.87:0,17,82	0/0:22,0:21:62.63:0,63,571	0/0:24,0:24:71.64:0,72,651	0/0:15,0:15:45:0,45,410	0/0:22,0:22:58.59:0,59,450	0/0:30,0:29:69.60:0,70,593	0/0:22,0:21:7.96:0,8,316	0/0:28,0:28:62.57:0,63,585	1/1:21,0:21:28.77:177,29,0	0/0:29,0:28:71.94:0,72,684	1/1:12,0:12:19.98:116,20,0
chr10	37678868	.	G	GA	955.15	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.240;DP=602;FS=18.866;HRun=8;HaplotypeScore=59.8826;InbreedingCoeff=0.9945;MQ=78.70;MQ0=0;MQRankSum=-2.774;QD=25.14;ReadPosRankSum=0.603;VQSLOD=2.1881;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:93.05:0,93,851	0/0:13,0:13:33.01:0,33,302	0/0:13,0:12:26.89:0,27,234	0/0:17,0:16:35.14:0,35,297	0/0:29,0:29:75.02:0,75,686	0/0:20,0:20:60.03:0,60,549	0/0:14,0:14:39.02:0,39,357	0/0:27,0:27:69.01:0,69,624	0/0:15,0:15:36:0,36,325	0/0:26,0:26:60.01:0,60,546	0/0:29,0:29:78.04:0,78,714	0/0:21,0:21:54.02:0,54,494	0/0:22,0:22:56.97:0,57,522	0/0:20,0:20:57.03:0,57,522	0/0:40,0:41:99:0,113,1022	0/0:22,0:22:51.02:0,51,467	0/0:16,0:16:39.02:0,39,357	0/0:14,0:14:42.02:0,42,384	0/0:25,0:25:57.01:0,57,522	0/0:29,0:29:78.03:0,78,714	0/0:17,0:17:48:0,48,434	0/0:12,0:12:33.01:0,33,302	0/0:20,0:20:57.03:0,57,522	0/0:21,0:21:51.01:0,51,467	0/0:12,0:12:36.02:0,36,329	1/1:4,28:32:32.34:867,32,0	0/0:35,2:36:67.35:0,67,855	1/1:0,6:6:18.05:208,18,0
chr10	37680583	.	TG	T	953.05	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.568;DP=589;FS=0.000;HRun=2;HaplotypeScore=58.0266;InbreedingCoeff=0.9977;MQ=83.30;MQ0=0;MQRankSum=-2.354;QD=34.04;ReadPosRankSum=1.141;VQSLOD=3.7195;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,135,2020	0/0:9,0:9:27.09:0,27,403	0/0:24,0:24:69.17:0,69,914	0/0:19,0:19:36.19:0,36,585	0/0:27,0:27:81.25:0,81,1160	0/0:25,0:25:72.24:0,72,1075	0/0:20,0:20:60.20:0,60,899	0/0:27,0:27:81.26:0,81,1175	0/0:25,0:25:75.24:0,75,1103	0/0:24,0:24:72.24:0,72,1062	0/0:16,0:16:45.14:0,45,653	0/0:23,0:23:69.20:0,69,977	0/0:14,0:14:42.11:0,42,586	0/0:19,0:19:54.17:0,54,788	0/0:30,0:30:87.29:0,87,1302	0/0:32,0:32:96.31:0,96,1417	0/0:26,0:25:78.25:0,78,1148	0/0:17,0:17:51.16:0,51,744	0/0:27,0:27:81.25:0,81,1164	0/0:13,0:13:39.13:0,39,584	0/0:12,0:12:36.10:0,36,518	0/0:9,0:9:27.09:0,27,405	0/0:20,0:20:60.20:0,60,899	0/0:20,0:20:56.85:0,57,835	0/0:13,0:13:39.13:0,39,584	1/1:0,20:20:60.17:763,60,0	0/0:25,0:25:72.23:0,72,1043	1/1:0,8:8:24.08:312,24,0
chr10	37682009	.	AACACAC	A	2413.49	PASS	AC=28;AF=0.519;AN=54;BaseQRankSum=0.810;DP=497;FS=4.632;HRun=0;HaplotypeScore=115.3775;InbreedingCoeff=0.8096;MQ=64.17;MQ0=22;MQRankSum=-4.711;QD=11.28;ReadPosRankSum=0.120;VQSLOD=2.4933;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:33.11:0,33,721	1/1:3,0:4:6.02:102,6,0	0/0:24,0:15:5.99:0,6,67	./.	0/0:7,0:12:8.06:0,8,164	0/0:14,0:25:18.03:0,18,414	0/0:18,0:25:12.02:0,12,256	1/1:28,8:32:25.30:347,25,0	0/0:7,0:14:12.04:0,12,321	0/0:12,0:11:18.06:0,18,421	0/0:8,0:8:8.77:0,9,200	1/1:6,0:14:12.04:166,12,0	1/1:6,6:12:9.03:174,9,0	1/1:10,13:22:18.06:339,18,0	0/0:7,0:20:24.08:0,24,647	0/0:17,0:19:21.07:0,21,491	0/0:9,0:20:24.06:0,24,573	0/0:12,0:21:51.17:0,51,1197	1/1:9,4:11:15.05:303,15,0	1/1:6,5:11:8.99:142,9,0	0/0:22,7:28:0:0,0,0	1/1:9,3:11:8.98:140,9,0	1/1:5,0:9:2.71:40,3,0	1/1:17,1:26:9.03:154,9,0	1/1:5,6:11:3.01:61,3,0	1/1:4,0:13:21.07:293,21,0	1/1:13,6:17:12.04:228,12,0	1/1:4,0:6:9.03:126,9,0
chr10	37682672	.	A	AT	361.90	PASS	AB=1.000;AC=5;AF=0.096;AN=52;BaseQRankSum=4.745;DP=344;FS=11.546;HRun=6;HaplotypeScore=47.0283;InbreedingCoeff=0.6174;MQ=62.61;MQ0=15;MQRankSum=-3.445;QD=7.87;ReadPosRankSum=-0.725;VQSLOD=-0.2945;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:14:35.88:0,36,366	0/0:5,0:5:12.03:0,12,128	0/0:32,0:9:8.06:0,8,154	0/1:29,0:10:5.25:5,0,65	0/0:10,0:9:27.06:0,27,282	0/0:16,0:16:36.09:0,36,383	0/0:7,0:7:18.02:0,18,179	0/0:42,0:42:99:0,108,1148	0/0:2,0:2:6.02:0,6,64	0/0:9,0:8:18.04:0,18,188	0/0:6,0:6:15.04:0,15,157	0/0:2,0:2:0:0,0,0	0/0:6,0:5:12.03:0,12,129	0/0:11,0:10:24.06:0,24,258	0/0:10,0:10:9.01:0,9,97	0/0:12,0:12:30.07:0,30,320	0/0:35,0:35:85.02:0,85,893	0/0:17,0:16:35.87:0,36,384	0/0:24,0:24:60.58:0,61,611	0/0:4,0:4:8.86:0,9,78	0/0:10,0:9:26.87:0,27,256	0/0:2,0:2:3.01:0,3,31	./.	./.	0/0:8,0:8:21.05:0,21,225	1/1:9,4:13:30.05:331,30,0	0/0:10,0:10:30.08:0,30,322	1/1:2,2:4:12.04:143,12,0
chr10	37682674	.	TTTTA	T	349.31	PASS	AB=1.000;AC=5;AF=0.096;AN=52;BaseQRankSum=5.357;DP=340;FS=7.424;HRun=0;HaplotypeScore=61.6918;InbreedingCoeff=0.5947;MQ=62.12;MQ0=18;MQRankSum=-4.838;QD=13.44;ReadPosRankSum=-1.726;VQSLOD=1.5819;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:14:14.68:0,15,714	0/0:6,0:6:15.04:0,15,303	0/0:34,0:9:13.14:0,13,331	0/0:32,0:10:8.75:0,9,132	0/0:11,0:10:27.01:0,27,504	0/0:16,0:16:36.01:0,36,711	0/0:7,0:7:18.04:0,18,339	0/0:39,0:39:99:0,108,2368	0/0:2,0:2:6.02:0,6,150	0/0:8,0:7:18.04:0,18,275	0/0:6,0:6:14.96:0,15,242	0/0:2,0:2:3:0,3,28	0/0:5,0:4:12.04:0,12,282	0/0:10,0:9:24.06:0,24,541	0/1:11,0:11:6.28:6,0,157	0/0:11,0:11:30.10:0,30,715	0/0:36,0:35:66.52:0,67,1975	0/0:17,0:16:36.47:0,36,718	0/0:24,0:24:66.19:0,66,1360	0/0:4,0:4:12.04:0,12,227	0/0:10,0:9:27.09:0,27,593	0/0:1,0:1:3.01:0,3,38	./.	./.	0/0:8,0:8:21.07:0,21,493	1/1:5,6:11:29.93:384,30,0	0/0:10,0:10:30.10:0,30,734	1/1:4,0:4:11.80:77,12,0
chr10	37682679	.	T	TTTA	336.91	PASS	AC=4;AF=0.077;AN=52;BaseQRankSum=4.602;DP=339;FS=18.011;HRun=0;HaplotypeScore=61.6181;InbreedingCoeff=0.6666;MQ=61.23;MQ0=22;MQRankSum=-3.675;QD=22.46;ReadPosRankSum=0.438;VQSLOD=1.3920;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:14:33.05:0,33,435	0/0:6,0:6:18.03:0,18,258	0/0:34,0:9:11.19:0,11,249	0/0:31,0:10:21.05:0,21,140	0/0:13,0:11:21.01:0,21,326	0/0:17,0:17:33.09:0,33,471	0/0:5,0:5:15.01:0,15,197	0/0:40,0:39:99:0,102,1632	0/0:2,0:2:6.02:0,6,102	0/0:7,0:6:12.03:0,12,147	0/0:6,0:6:14.93:0,15,144	0/0:2,0:2:3.01:0,3,32	0/0:5,0:4:12.04:0,12,204	0/0:9,0:8:21.07:0,21,353	0/0:6,0:6:12.02:0,12,156	0/0:11,0:11:30.57:0,31,484	0/0:39,0:38:86.11:0,86,1388	0/0:15,0:14:29.57:0,30,412	0/0:24,0:23:65.01:0,65,995	0/0:4,0:4:12.04:0,12,180	0/0:12,0:10:27:0,27,397	0/0:1,0:1:2.97:0,3,20	./.	./.	0/0:9,0:9:21.06:0,21,333	1/1:8,3:11:26.93:334,27,0	0/0:10,0:10:30.10:0,30,502	1/1:2,2:4:5.13:111,5,0
chr10	37682687	.	A	ATT	1211.02	PASS	AB=1.000;AC=20;AF=0.400;AN=50;BaseQRankSum=0.959;DP=324;FS=11.011;HRun=11;HaplotypeScore=48.1486;InbreedingCoeff=0.6840;MQ=56.04;MQ0=30;MQRankSum=-2.767;QD=14.59;ReadPosRankSum=-0.249;VQSLOD=0.5188;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,9:12:30.06:410,30,0	0/1:6,0:6:2.45:2,0,125	0/0:30,0:7:5.18:0,5,36	0/0:29,0:8:1.30:0,1,17	0/0:12,0:10:7.04:0,7,135	1/1:5,10:15:24.04:323,24,0	1/1:1,3:4:9.03:126,9,0	0/0:35,0:36:59.63:0,60,602	0/0:3,0:3:5.99:0,6,58	1/1:3,2:3:6.02:87,6,0	1/1:2,1:3:3.01:43,3,0	0/1:2,0:2:0:0,0,0	0/0:6,0:4:9.01:0,9,87	0/0:8,0:6:8.99:0,9,87	1/1:4,2:6:8.99:107,9,0	0/0:9,0:10:9.42:0,9,132	0/0:44,0:40:68.28:0,68,684	1/1:6,8:15:25.38:264,25,0	0/0:24,0:23:38.72:0,39,344	0/0:5,0:5:15.01:0,15,141	0/0:14,0:11:19.78:0,20,183	./.	./.	./.	0/0:7,0:7:15.02:0,15,145	1/1:9,0:9:3.11:8,3,0	0/0:9,0:9:18.02:0,18,174	1/1:2,0:2:3.63:9,4,0
chr10	37683622	.	TA	T	2132.41	PASS	AB=0.591;AC=19;AF=0.339;AN=56;BaseQRankSum=8.814;DP=512;FS=0.399;HRun=14;HaplotypeScore=53.8734;InbreedingCoeff=0.8881;MQ=68.14;MQ0=3;MQRankSum=1.197;QD=11.40;ReadPosRankSum=2.412;VQSLOD=3.4344;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,18:22:49.60:333,50,0	0/0:5,0:5:8.97:0,9,76	0/0:17,0:6:2.99:0,3,23	0/0:11,0:8:8.21:0,8,54	0/0:27,4:31:16.70:0,17,573	1/1:1,13:14:32.70:224,33,0	1/1:3,7:10:20.81:144,21,0	0/0:34,0:34:51.92:0,52,596	0/0:11,0:11:24.03:0,24,222	1/1:12,18:30:28.45:329,28,0	1/1:5,27:33:42.35:425,42,0	1/1:3,12:15:20.81:144,21,0	0/0:20,0:20:46.85:0,47,399	0/0:14,0:14:29.18:0,29,297	1/1:6,16:22:43.69:294,44,0	0/0:18,0:19:35.14:0,35,340	0/0:20,2:22:30.48:0,30,425	0/1:4,9:13:1.76:101,0,2	0/0:18,1:19:24.46:0,24,362	0/0:20,0:20:47.94:0,48,414	0/0:17,2:19:21.36:0,21,329	0/0:11,1:12:6.42:0,6,196	1/1:1,9:10:17.82:124,18,0	1/1:5,13:18:32.71:226,33,0	0/0:22,0:22:45.03:0,45,409	0/0:15,2:17:21.45:0,21,338	0/0:21,0:21:56.94:0,57,501	0/0:11,0:11:30.03:0,30,279
chr10	37684578	.	C	CTTTTTTCTTTCTTT	11300.09	PASS	AB=1.000;AC=43;AF=0.768;AN=56;BaseQRankSum=7.202;DP=458;FS=14.169;HRun=0;HaplotypeScore=164.6779;InbreedingCoeff=0.5923;MQ=56.77;MQ0=6;MQRankSum=-9.257;QD=31.22;ReadPosRankSum=-1.133;VQSLOD=3.3378;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:15:27.18:708,27,0	1/1:2,0:14:15.02:686,15,0	0/1:12,0:10:32.18:32,0,266	0/0:11,0:11:22.23:0,22,479	0/0:21,0:22:38.49:0,38,1102	1/1:3,0:15:3.01:146,3,0	1/1:13,0:12:22.52:647,23,0	1/1:28,0:22:44.07:1148,44,0	0/0:15,0:16:29.73:0,30,797	1/1:23,0:22:47.65:1066,48,0	1/1:22,0:20:11.19:326,11,0	1/1:12,0:10:30.10:856,30,0	1/1:8,0:5:12.04:311,12,0	1/1:10,0:11:14.89:540,15,0	1/1:10,0:9:17.86:343,18,0	0/0:11,0:12:31.69:0,32,860	0/0:28,0:29:63:0,63,1814	1/1:11,0:8:7.17:369,7,0	1/1:21,0:20:41.98:1410,42,0	1/1:28,0:26:17.91:392,18,0	1/1:5,0:5:6.79:41,7,0	1/1:7,0:7:14.39:401,14,0	1/1:4,7:15:5.49:195,5,0	1/1:3,2:7:6.02:370,6,0	1/1:16,0:14:14.84:100,15,0	0/1:24,0:24:73.94:417,0,74	1/1:19,0:15:26.96:775,27,0	0/1:10,0:10:14.50:20,0,14
chr10	37684583	.	T	TTC	1522.63	PASS	AB=0.925;AC=25;AF=0.446;AN=56;BaseQRankSum=-1.980;DP=415;FS=1.589;HRun=0;HaplotypeScore=69.2740;InbreedingCoeff=-0.1635;MQ=54.94;MQ0=7;MQRankSum=-2.088;QD=5.32;ReadPosRankSum=2.678;VQSLOD=1.9142;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:17,0:13:16.17:137,0,16	1/1:7,0:7:0.40:67,0,0	0/0:12,0:9:17.71:0,18,162	0/0:13,0:10:20.03:0,20,165	0/0:26,0:25:55.73:0,56,580	0/1:11,0:9:10.63:11,0,43	0/1:13,0:12:13.39:154,0,13	0/1:27,0:21:47.48:221,0,47	0/0:17,0:16:44.91:0,45,450	0/1:22,0:21:66.76:156,0,67	0/1:8,12:18:10.34:53,0,10	0/1:14,0:12:22.83:86,0,23	0/0:9,0:6:3.11:0,3,37	1/1:11,0:8:15.12:94,15,0	0/1:8,0:7:39.35:64,0,39	0/0:15,0:15:38.85:0,39,456	0/0:28,0:27:75.10:0,75,954	0/1:11,0:8:44.89:45,0,69	0/1:19,0:18:99:169,0,105	0/1:10,16:23:14.68:88,0,15	0/1:3,0:3:3.61:13,0,4	1/1:6,0:6:1.53:77,2,0	0/1:9,0:7:10.24:11,0,10	1/1:9,0:6:5.86:36,6,0	0/1:7,10:15:32.36:32,0,66	0/1:22,0:22:35.39:35,0,40	1/1:14,0:10:16.87:137,17,0	0/0:9,0:9:2.37:0,2,10
chr10	37685819	.	CCACACACACA	C	5289.29	PASS	AB=0.788;AC=33;AF=0.611;AN=54;BaseQRankSum=5.096;DP=561;FS=3.876;HRun=0;HaplotypeScore=180.2542;InbreedingCoeff=0.3394;MQ=71.94;MQ0=16;MQRankSum=-8.690;QD=14.86;ReadPosRankSum=-0.414;VQSLOD=3.5900;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:19,0:19:13.38:13,0,102	1/1:4,6:9:5.55:179,6,0	./.	0/0:39,0:27:3.86:0,4,23	0/0:18,0:18:27.09:0,27,1064	0/1:13,0:26:8.95:226,0,9	0/1:14,0:20:8.91:152,0,9	0/1:22,0:20:55.96:83,0,56	0/0:17,0:17:36.12:0,36,1239	0/1:11,2:17:65.01:348,0,65	1/1:9,1:17:12.01:114,12,0	0/0:10,0:18:9.01:0,9,248	1/1:16,4:21:26.04:705,26,0	1/1:3,10:12:18.06:537,18,0	1/1:9,1:16:15.03:208,15,0	0/0:20,0:19:39.11:0,39,1066	0/0:20,0:20:42.13:0,42,1453	1/1:7,0:9:9:89,9,0	1/1:10,2:12:3.01:89,3,0	0/1:12,6:20:16.84:301,0,17	1/1:20,0:19:4.80:12,5,0	0/1:13,9:25:6.40:390,0,6	1/1:23,0:23:0.47:1,0,0	0/0:30,0:38:27.53:0,28,931	1/1:7,7:14:9.03:268,9,0	1/1:17,0:20:8.90:155,9,0	1/1:9,14:25:43.17:1280,43,0	1/1:1,0:6:6.02:140,6,0
chr10	37685820	.	CACACACACA	C	2668.55	PASS	AB=0.980;AC=17;AF=0.304;AN=56;BaseQRankSum=12.569;DP=568;FS=2.201;HRun=0;HaplotypeScore=178.4867;InbreedingCoeff=-0.2919;MQ=70.06;MQ0=19;MQRankSum=-12.423;QD=9.85;ReadPosRankSum=3.521;VQSLOD=2.8186;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:19:39.66:0,40,505	0/1:10,0:9:85.89:89,0,86	0/0:32,0:23:69.22:0,69,845	0/0:41,0:27:77.03:0,77,896	0/0:18,0:18:45.15:0,45,1358	0/1:25,0:26:99:179,0,346	0/1:19,0:20:81.09:81,0,332	0/0:23,0:21:57.83:0,58,597	0/0:17,0:17:47.95:0,48,1475	0/1:16,0:16:99:213,0,315	0/1:16,0:17:58.73:59,0,168	0/0:22,0:21:21.07:0,21,531	0/1:19,3:22:99:363,0,252	0/1:13,0:12:49.42:290,0,49	0/1:15,0:15:99:127,0,221	0/0:20,0:19:57.19:0,57,1509	0/0:23,0:23:69.23:0,69,2069	0/1:9,0:9:56.80:57,0,156	0/1:12,0:12:16.11:16,0,368	0/1:20,0:20:99:158,0,405	0/0:20,0:19:41.71:0,42,493	0/1:25,0:25:99:205,0,418	0/0:22,0:22:35.84:0,36,424	0/0:39,0:39:53.89:0,54,1399	0/1:14,0:14:99:127,0,224	0/1:21,0:20:45.62:46,0,558	0/1:24,1:25:99:718,0,149	1/1:6,0:6:6.02:104,6,0
chr10	37687167	.	G	GTT	1277.21	PASS	AB=0.965;AC=7;AF=0.125;AN=56;BaseQRankSum=1.747;DP=577;FS=9.447;HRun=7;HaplotypeScore=113.7931;InbreedingCoeff=0.5016;MQ=64.12;MQ0=4;MQRankSum=-6.180;QD=12.65;ReadPosRankSum=-2.999;VQSLOD=-0.2506;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:22:6.32:0,6,208	0/0:9,0:9:18.51:0,19,191	0/0:26,0:11:12.29:0,12,55	0/1:22,0:12:8.08:8,0,77	0/0:26,0:26:49.46:0,49,559	0/0:17,0:16:17.39:0,17,366	0/1:15,0:16:23.37:23,0,199	0/0:19,0:19:26.85:0,27,248	0/0:23,0:23:61.73:0,62,694	0/0:22,0:21:2.10:0,2,357	0/0:31,0:31:22.33:0,22,419	0/0:15,0:15:23.82:0,24,244	0/0:24,0:25:31.21:0,31,432	0/0:17,0:17:41.52:0,42,374	0/1:20,0:21:0.14:0,0,171	0/0:27,0:27:56.41:0,56,612	0/0:21,0:21:49.67:0,50,535	0/0:19,0:19:42.75:0,43,455	0/0:16,0:16:35.81:0,36,384	0/0:25,0:24:62.56:0,63,586	0/0:11,0:11:14.88:0,15,147	0/0:21,0:21:56.69:0,57,531	0/0:26,0:26:68.63:0,69,684	0/0:8,0:8:21.06:0,21,239	0/0:24,0:24:48.10:0,48,496	1/1:15,14:30:63.16:959,63,0	0/0:25,0:24:47.41:0,47,422	1/1:5,6:12:27.09:419,27,0
chr10	37687175	.	GTTTT	G	1048.69	PASS	AB=0.964;AC=7;AF=0.125;AN=56;BaseQRankSum=-1.364;DP=577;FS=0.644;HRun=16;HaplotypeScore=137.0939;InbreedingCoeff=0.7841;MQ=63.43;MQ0=4;MQRankSum=1.999;QD=14.57;ReadPosRankSum=0.065;VQSLOD=1.0127;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:50.91:0,51,729	0/0:8,0:8:11.30:0,11,205	0/0:33,0:13:3.53:0,4,56	0/1:25,0:15:10.72:11,0,56	0/0:28,0:30:75.18:0,75,1271	0/0:17,0:16:39.11:0,39,692	0/0:14,0:14:38.13:0,38,641	0/0:12,0:12:25.64:0,26,415	0/0:21,0:23:57.18:0,57,1146	0/0:25,0:25:62.76:0,63,968	0/0:29,0:31:52.63:0,53,970	1/1:4,8:12:17.97:231,18,0	0/0:24,0:24:50.96:0,51,831	0/0:19,0:19:45.41:0,45,725	0/0:20,0:20:46.58:0,47,758	0/0:24,0:26:63.16:0,63,1095	0/0:18,0:19:48.16:0,48,984	0/0:18,0:19:38.60:0,39,678	0/0:13,0:13:30.30:0,30,443	0/0:26,0:25:66.02:0,66,1022	0/0:8,0:8:14.25:0,14,256	0/0:21,0:21:55.04:0,55,895	1/1:4,19:26:58.57:733,59,0	1/1:1,5:7:17.96:219,18,0	0/0:24,0:24:41.86:0,42,720	0/0:33,0:33:77.72:0,78,1088	0/0:26,0:25:52.73:0,53,875	0/0:9,0:9:27.09:0,27,461
chr10	37687181	.	T	TTTG	2476	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-0.944;DP=579;FS=2.148;HRun=0;HaplotypeScore=128.6394;InbreedingCoeff=0.9465;MQ=66.69;MQ0=4;MQRankSum=5.256;QD=13.38;ReadPosRankSum=7.242;VQSLOD=3.2431;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:2.78:0,3,271	1/1:7,1:8:10.15:103,10,0	0/0:34,0:14:8.12:0,8,111	0/0:30,0:17:23.70:0,24,160	0/0:31,0:31:85.91:0,86,956	0/0:18,0:17:42.25:0,42,287	0/0:13,0:13:26.63:0,27,189	1/1:12,0:12:17.44:163,17,0	0/0:21,0:21:63.05:0,63,789	0/0:28,0:26:19.49:0,19,333	0/0:30,0:30:17.94:0,18,390	0/0:14,0:14:26.97:0,27,257	1/1:21,0:22:45.70:307,46,0	1/1:19,0:19:45.25:284,45,0	0/0:18,0:18:17.38:0,17,216	0/0:23,0:23:67.30:0,67,712	0/0:18,0:18:46.87:0,47,579	0/0:17,0:17:36.81:0,37,291	1/1:15,0:15:27.05:203,27,0	1/1:25,2:26:48.29:469,48,0	1/1:8,0:8:15.31:99,15,0	1/1:20,2:22:56.07:450,56,0	0/0:27,0:27:72.89:0,73,708	0/0:8,0:8:24.05:0,24,248	1/1:27,0:27:35.71:266,36,0	0/0:32,0:32:60.12:0,60,311	1/1:25,0:24:53.29:349,53,0	0/0:9,0:9:16.64:0,17,56
chr10	37687182	.	T	TTG	6115.55	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=-9.354;DP=578;FS=8.453;HRun=0;HaplotypeScore=105.7878;InbreedingCoeff=0.9177;MQ=66.72;MQ0=4;MQRankSum=5.225;QD=27.06;ReadPosRankSum=7.978;VQSLOD=5.1061;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:57.13:0,57,390	1/1:2,5:7:14.59:174,15,0	0/0:34,0:14:20.36:0,20,154	0/0:30,0:17:17.96:0,18,155	0/0:31,0:31:81.74:0,82,887	0/0:17,0:16:45.24:0,45,310	0/0:13,0:13:31.48:0,31,219	1/1:0,12:13:35.96:470,36,0	0/0:22,0:22:63.02:0,63,731	0/0:27,0:25:59.95:0,60,416	0/0:31,0:31:74.57:0,75,513	0/0:14,0:14:29.94:0,30,251	1/1:2,17:22:51.08:748,51,0	1/1:4,15:19:48.08:692,48,0	0/0:18,0:18:41.60:0,42,261	0/0:23,0:23:67.99:0,68,715	0/0:18,0:18:47.08:0,47,553	0/0:16,0:16:43.55:0,44,317	1/1:2,12:15:38.90:463,39,0	1/1:9,19:27:77.34:984,77,0	1/1:0,8:8:15.01:228,15,0	1/1:3,17:21:57.05:796,57,0	0/0:27,0:27:77.85:0,78,652	0/0:8,0:8:24:0,24,211	1/1:3,24:27:44.67:656,45,0	0/1:32,0:32:38.94:39,0,99	1/1:3,22:24:54.13:818,54,0	1/1:9,0:9:17.02:49,17,0
chr10	37687184	.	T	TTG	1385.22	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=1.555;DP=574;FS=1.164;HRun=0;HaplotypeScore=122.6056;InbreedingCoeff=0.8862;MQ=65.98;MQ0=4;MQRankSum=-4.828;QD=33.79;ReadPosRankSum=1.302;VQSLOD=5.8479;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:53.36:0,53,365	0/0:7,0:7:13.22:0,13,66	0/0:31,0:12:8.40:0,8,121	0/0:31,0:18:21.79:0,22,156	0/0:31,0:31:81.07:0,81,860	0/0:17,0:16:45.11:0,45,296	0/0:13,0:13:31.19:0,31,209	0/0:13,0:13:20.75:0,21,123	0/0:23,0:23:66.01:0,66,737	0/0:28,0:26:62.46:0,62,431	0/0:31,0:31:71.54:0,72,482	0/0:14,0:14:29.90:0,30,237	0/0:21,0:21:8.19:0,8,65	0/0:18,0:18:21.37:0,21,92	0/0:18,0:18:41.60:0,42,260	0/0:24,0:24:64.37:0,64,658	0/0:18,0:18:47.07:0,47,536	0/0:16,0:16:38.53:0,39,264	0/0:14,0:14:34.02:0,34,160	0/0:29,0:28:47.05:0,47,236	0/0:8,0:8:9.93:0,10,31	0/0:22,0:22:16.07:0,16,112	0/0:27,0:27:77.75:0,78,618	0/0:8,0:8:23.97:0,24,199	0/0:25,0:25:33.91:0,34,129	1/1:8,24:32:84.58:1100,85,0	0/0:24,0:23:17.71:0,18,65	1/1:0,9:9:27.09:406,27,0
chr10	37687247	.	GCA	G	200.73	PASS	AB=0.969;AC=10;AF=0.179;AN=56;BaseQRankSum=1.632;DP=492;FS=58.813;HRun=0;HaplotypeScore=107.7619;InbreedingCoeff=-0.0392;MQ=76.42;MQ0=0;MQRankSum=-2.289;QD=1.37;ReadPosRankSum=2.137;VQSLOD=-0.6177;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:25:42.42:44,0,42	0/0:4,0:4:7.44:0,7,58	0/0:27,0:17:32.20:0,32,327	0/0:20,0:14:14.43:0,14,99	0/0:24,0:23:63.86:0,64,875	0/0:18,0:18:13.47:0,13,129	1/1:14,0:14:7.37:52,7,0	0/0:25,1:26:11.96:0,12,264	0/0:20,0:20:53.35:0,53,427	0/1:11,1:12:3.40:3,0,132	0/0:27,0:27:4.87:0,5,129	0/0:11,0:11:5.82:0,6,79	0/1:20,1:21:86.85:87,0,93	0/1:13,0:14:24.63:25,0,97	0/1:13,0:13:9.98:28,0,10	0/0:25,0:25:69.03:0,69,1009	0/0:13,0:13:35.99:0,36,504	0/1:15,0:15:22.91:61,0,23	0/0:11,0:11:20.19:0,20,137	0/0:30,0:30:0.56:0,1,142	0/0:3,0:3:2.82:0,3,23	0/1:17,0:17:18.87:19,0,88	0/0:23,0:23:36.96:0,37,258	0/0:7,0:7:16.95:0,17,77	0/0:26,0:25:22.42:0,22,213	0/0:21,0:21:39.78:0,40,287	0/1:15,1:16:20.41:20,0,57	0/0:9,0:9:23.31:0,23,118
chr10	37687248	.	CAA	C	5253.85	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=0.555;DP=506;FS=4.299;HRun=16;HaplotypeScore=92.1942;InbreedingCoeff=0.9150;MQ=74.81;MQ0=0;MQRankSum=-0.427;QD=14.39;ReadPosRankSum=2.188;VQSLOD=4.2598;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,21:25:47.80:441,48,0	1/1:3,1:4:5.66:37,6,0	0/0:32,0:17:12.20:0,12,87	0/0:19,1:14:6.44:0,6,50	0/0:18,1:24:33.86:0,34,571	1/1:4,12:18:18.36:276,18,0	1/1:0,13:14:35.69:285,36,0	1/1:12,14:26:41.67:351,42,0	0/0:9,0:22:25.84:0,26,159	1/1:6,5:12:20.63:162,21,0	1/1:6,16:27:58.72:445,59,0	1/1:5,0:11:19.28:90,19,0	1/1:8,13:21:44.84:376,45,0	1/1:6,6:14:14.47:153,14,0	1/1:1,12:13:35.92:301,36,0	0/0:21,0:26:67.26:0,67,744	0/0:13,0:13:27.07:0,27,333	1/1:1,12:15:32.68:304,33,0	1/1:6,5:11:20.93:175,21,0	1/1:7,18:30:53.20:508,53,0	1/1:1,2:3:5.96:50,6,0	1/1:5,9:17:21.77:226,22,0	1/1:10,1:23:35.75:166,36,0	1/1:1,0:7:16.44:70,16,0	1/1:12,13:27:24.80:369,25,0	1/1:11,0:21:32.29:134,32,0	1/1:5,9:16:28.35:277,28,0	1/1:4,0:9:13.57:58,14,0
chr10	37687809	.	C	CATT	34608.63	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-2.591;DP=817;FS=1.413;HRun=0;HaplotypeScore=128.1980;InbreedingCoeff=0.9998;MQ=82.64;MQ0=0;MQRankSum=-11.870;QD=54.42;ReadPosRankSum=-0.341;VQSLOD=6.4508;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,56:61:99:2984,147,0	1/1:1,14:15:36.08:753,36,0	0/0:29,0:29:57.19:0,57,948	0/0:26,0:26:65.81:0,66,1014	0/0:32,0:32:93.30:0,93,1509	1/1:1,14:15:39.09:836,39,0	1/1:0,20:21:54.19:1206,54,0	1/1:5,32:37:99:2273,108,0	0/0:14,0:14:39.13:0,39,650	1/1:4,34:39:99:2264,111,0	1/1:1,24:25:69.15:1444,69,0	1/1:5,31:36:93.28:1946,93,0	1/1:2,21:24:57.20:1264,57,0	1/1:4,23:27:51.18:1140,51,0	1/1:3,35:40:96.33:2135,96,0	0/0:39,0:39:99:0,117,1946	0/0:41,0:41:99:0,111,1751	1/1:1,27:28:75.17:1632,75,0	1/1:9,18:28:75.26:1642,75,0	1/1:2,28:30:72.18:1534,72,0	1/1:2,27:29:78.10:1621,78,0	1/1:4,22:26:66.18:1372,66,0	1/1:1,21:22:54.19:1188,54,0	1/1:1,21:22:60.21:1360,60,0	1/1:2,18:20:54.19:1178,54,0	1/1:2,36:39:99:2236,108,0	1/1:5,34:40:93.32:2051,93,0	1/1:1,11:12:30:547,30,0
chr10	37689959	.	C	CATGGAG	2511.99	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-3.770;DP=675;FS=10.795;HRun=0;HaplotypeScore=140.0890;InbreedingCoeff=0.9952;MQ=88.66;MQ0=0;MQRankSum=-7.073;QD=76.12;ReadPosRankSum=-1.671;VQSLOD=3.6157;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,141,3168	0/0:8,0:8:18.06:0,18,411	0/0:25,0:25:50.38:0,50,1146	0/0:24,0:24:51.17:0,51,1025	0/0:25,0:25:72.25:0,72,1644	0/0:26,0:26:69.15:0,69,1525	0/0:23,0:23:57.13:0,57,1124	0/0:30,0:30:81.27:0,81,1770	0/0:18,0:18:54.19:0,54,1234	0/0:23,0:23:63.22:0,63,1439	0/0:17,0:17:51.16:0,51,1115	0/0:29,0:29:75.26:0,75,1689	0/0:21,0:21:57.18:0,57,1243	0/0:25,0:25:69.18:0,69,1404	0/0:30,0:30:81.25:0,81,1741	0/0:16,0:16:33.10:0,33,710	0/0:34,0:34:99:0,102,2245	0/0:20,0:20:51.18:0,51,1137	0/0:22,0:22:57.19:0,57,1243	0/0:26,0:26:72.21:0,72,1536	0/0:34,0:34:99:0,99,2137	0/0:20,0:20:57.20:0,57,1302	0/0:22,0:22:66.23:0,66,1489	0/0:24,0:24:69.18:0,69,1478	0/0:32,0:32:87.24:0,87,1804	1/1:9,11:20:54.19:1712,54,0	0/0:16,0:16:48.14:0,48,1050	1/1:1,11:13:27.09:922,27,0
chr10	37691129	.	TATA	T	1741.01	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.458;DP=675;FS=2.976;HRun=0;HaplotypeScore=95.1721;InbreedingCoeff=0.9996;MQ=89.42;MQ0=0;MQRankSum=-2.412;QD=43.53;ReadPosRankSum=0.397;VQSLOD=5.3139;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,132,2934	0/0:11,0:11:33.11:0,33,748	0/0:22,0:22:66.22:0,66,1395	0/0:28,0:28:78.23:0,78,1662	0/0:17,0:17:51.16:0,51,1112	0/0:35,0:35:96.32:0,96,2128	0/0:20,0:20:54.19:0,54,1200	0/0:25,0:25:72.24:0,72,1544	0/0:15,0:15:45.15:0,45,1017	0/0:16,0:16:48.16:0,48,1087	0/0:11,0:11:30.10:0,30,672	0/0:29,0:29:87.30:0,87,1928	0/0:26,0:26:78.27:0,78,1719	0/0:25,0:25:72.25:0,72,1607	0/0:34,0:34:99:0,102,2301	0/0:33,0:33:93.32:0,93,2106	0/0:27,0:27:78.27:0,78,1724	0/0:19,0:19:54.19:0,54,1220	0/0:19,0:19:54.19:0,54,1214	0/0:25,0:25:72.25:0,72,1627	0/0:27,0:27:75.24:0,75,1630	0/0:21,0:21:54.19:0,54,1222	0/0:22,0:22:63.22:0,63,1414	0/0:25,0:25:72.25:0,72,1629	0/0:33,0:33:93.32:0,93,2098	1/1:1,24:25:72.22:1163,72,0	0/0:23,0:23:69.24:0,69,1536	1/1:0,15:15:42.14:700,42,0
chr10	37691989	.	AAAAAG	A	346.58	PASS	AB=0.957;AC=10;AF=0.179;AN=56;BaseQRankSum=8.309;DP=373;FS=24.071;HRun=0;HaplotypeScore=101.4898;InbreedingCoeff=-0.0130;MQ=50.85;MQ0=9;MQRankSum=-6.710;QD=2.57;ReadPosRankSum=3.381;VQSLOD=0.0041;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:21,0:21:4.47:4,0,47	0/0:4,0:4:6.02:0,6,131	0/0:12,0:3:8.89:0,9,76	0/0:8,0:5:11.76:0,12,87	0/0:19,0:19:19.87:0,20,399	0/1:18,1:19:76.16:76,0,91	0/1:13,0:13:9.95:10,0,73	0/0:21,0:21:40.63:0,41,358	0/0:14,0:13:37.69:0,38,448	0/0:10,0:9:7.90:0,8,109	0/1:9,1:9:56.50:57,0,61	0/0:16,0:16:17.87:0,18,369	0/0:17,0:16:32.84:0,33,474	0/0:6,0:6:8.94:0,9,118	1/1:10,1:11:5.92:94,6,0	0/0:12,0:12:28.91:0,29,421	0/0:16,0:15:36.73:0,37,517	0/1:12,1:13:21.30:101,0,21	0/1:24,0:24:5.18:5,0,532	0/0:12,0:10:15.54:0,16,230	0/0:7,0:5:5.93:0,6,86	0/0:6,0:5:14.95:0,15,213	0/0:8,0:8:15.68:0,16,176	0/0:17,0:17:17.15:0,17,395	0/0:15,0:15:21.22:0,21,273	0/1:17,3:20:99:125,0,150	0/0:18,0:18:2.70:0,3,291	0/1:4,0:4:7.37:9,0,7
chr10	37691990	.	AAAAG	A	418.15	PASS	AB=0.979;AC=11;AF=0.196;AN=56;BaseQRankSum=9.193;DP=364;FS=21.715;HRun=0;HaplotypeScore=93.5050;InbreedingCoeff=-0.0970;MQ=51.62;MQ0=7;MQRankSum=-7.289;QD=2.61;ReadPosRankSum=2.834;VQSLOD=0.2546;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:19,0:19:24.87:25,0,25	0/0:4,0:4:6.02:0,6,106	0/0:12,0:3:8.88:0,9,73	0/0:8,0:5:11.76:0,12,87	0/0:20,0:20:0.14:0,0,307	0/1:13,4:17:61.09:61,0,73	0/1:13,0:13:39.96:40,0,65	0/0:20,0:20:33.75:0,34,286	0/0:14,0:14:23.45:0,23,305	0/0:11,0:10:10.42:0,10,129	0/1:10,0:9:29.89:30,0,49	0/1:16,0:16:9.01:9,0,238	0/0:17,0:16:26.11:0,26,355	0/0:6,0:6:7.24:0,7,80	1/1:9,2:11:17.24:168,17,0	0/0:12,0:12:25.27:0,25,307	0/0:16,0:15:30.97:0,31,392	0/1:13,0:13:11.33:101,0,11	0/1:23,0:23:14.01:14,0,373	0/0:10,0:9:6.68:0,7,144	0/0:7,0:5:3.01:0,3,57	0/0:6,0:5:11.97:0,12,158	0/0:7,0:7:14.80:0,15,140	0/0:16,0:16:14.22:0,14,307	0/0:14,0:14:5.58:0,6,194	0/1:19,0:19:86.12:86,0,149	0/1:19,0:19:29.74:30,0,212	0/0:4,0:4:1.82:0,2,11
chr10	37692878	.	GT	G	6739.07	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=12.439;DP=699;FS=0.315;HRun=2;HaplotypeScore=67.3376;InbreedingCoeff=0.9999;MQ=91.99;MQ0=0;MQRankSum=-3.284;QD=36.23;ReadPosRankSum=1.840;VQSLOD=5.4493;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,44:44:99:1597,123,0	0/0:13,0:13:39.13:0,39,578	0/0:32,0:32:90.29:0,90,1303	0/0:26,0:26:72.12:0,72,992	0/0:15,0:15:45.15:0,45,674	1/1:0,15:15:42.14:545,42,0	1/1:0,26:26:75.24:974,75,0	0/0:21,0:21:63.18:0,63,903	0/0:29,0:29:87.29:0,87,1303	1/1:0,26:26:75.24:974,75,0	1/1:0,16:16:45.15:584,45,0	0/0:21,0:21:63.21:0,63,944	0/0:25,0:25:69.22:0,69,1013	0/0:31,0:31:93.31:0,93,1392	1/1:0,33:33:93.30:1208,93,0	0/0:23,0:23:69.23:0,69,1034	0/0:38,0:38:99:0,114,1644	1/1:0,26:26:66.21:857,66,0	0/0:24,0:24:72.21:0,72,1039	0/0:25,0:25:75.20:0,75,1080	0/0:32,0:32:96.28:0,96,1414	0/0:21,0:21:60.20:0,60,890	0/0:17,0:17:42.12:0,42,610	0/0:48,0:48:99:0,138,2014	0/0:16,0:16:45.15:0,45,675	0/0:26,0:26:52.48:0,52,1098	0/0:19,0:19:57.19:0,57,851	0/0:11,0:11:33.11:0,33,495
chr10	37693753	.	A	AT	4755.55	PASS	AB=0.721;AC=41;AF=0.732;AN=56;BaseQRankSum=-4.471;DP=531;FS=8.326;HRun=13;HaplotypeScore=66.0060;InbreedingCoeff=-0.0128;MQ=70.26;MQ0=0;MQRankSum=-0.384;QD=9.73;ReadPosRankSum=-0.721;VQSLOD=3.4605;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:14,17:36:98.64:282,0,99	1/1:2,7:9:0.45:147,0,0	0/1:14,1:15:17.24:17,0,21	0/1:10,0:9:4.14:6,0,4	0/0:20,2:23:21.74:0,22,286	0/1:10,19:29:33.67:432,0,34	0/1:7,11:19:14.46:142,0,14	0/1:11,17:29:18.55:378,0,19	0/0:17,0:19:33.92:0,34,229	0/1:8,13:21:13.72:309,0,14	1/1:6,12:18:0.88:290,1,0	1/1:8,12:23:18.11:131,18,0	1/1:7,12:19:14.91:122,15,0	1/1:7,12:19:22.16:177,22,0	1/1:5,10:15:19.26:167,19,0	0/1:10,3:13:7.21:7,0,101	0/1:13,3:17:44.85:45,0,167	1/1:6,17:24:38.88:349,39,0	1/1:8,10:18:23.06:241,23,0	0/1:4,9:14:41.51:113,0,42	1/1:5,7:12:18.02:167,18,0	1/1:4,8:13:6.21:178,6,0	1/1:4,4:18:5.67:136,6,0	1/1:7,10:23:26.30:187,26,0	1/1:2,10:13:20.86:182,21,0	1/1:11,14:33:65.12:425,65,0	0/1:4,9:14:8.57:72,0,9	1/1:4,2:12:11.20:54,11,0
chr10	37697949	.	GCA	G	109.39	PASS	AB=0.926;AC=10;AF=0.208;AN=48;BaseQRankSum=1.566;DP=632;FS=0.890;HRun=0;HaplotypeScore=97.2957;InbreedingCoeff=0.0745;MQ=55.60;MQ0=17;MQRankSum=-0.710;QD=0.52;ReadPosRankSum=1.438;VQSLOD=1.5935;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:8.83:0,9,355	0/0:5,0:7:5.68:0,6,37	./.	./.	0/0:11,0:10:9.87:0,10,91	./.	0/1:39,2:41:22.32:22,0,222	0/0:25,0:25:1.25:0,1,3	0/1:18,0:18:13.38:13,0,201	0/0:18,0:18:1.68:0,2,157	0/0:14,0:14:14.98:0,15,145	0/0:29,0:29:22.26:0,22,211	0/0:19,0:19:22.54:0,23,203	0/0:25,0:26:19.25:0,19,155	0/1:24,5:32:80:80,0,553	0/1:31,0:29:12.98:13,0,237	0/1:29,7:35:19.33:19,0,526	0/1:9,1:15:15.89:16,0,87	0/0:12,0:12:5.96:0,6,45	0/0:7,0:13:5.12:0,5,24	0/0:47,0:46:33.98:0,34,284	./.	0/0:12,0:12:8.50:0,8,74	0/0:37,0:52:2.04:0,2,6	0/0:23,0:23:17.48:0,17,151	1/1:25,0:25:2.46:8,2,0	0/0:13,0:18:11.86:0,12,83	1/1:9,0:8:13.37:69,13,0
chr10	37699168	.	G	GA	5758.86	PASS	AB=0.923;AC=15;AF=0.268;AN=56;BaseQRankSum=-13.287;DP=507;FS=1.247;HRun=4;HaplotypeScore=48.9199;InbreedingCoeff=0.8929;MQ=92.94;MQ0=0;MQRankSum=-3.746;QD=31.99;ReadPosRankSum=3.795;VQSLOD=5.1175;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,41:41:99:1682,123,0	0/0:7,0:7:21.06:0,21,238	0/0:23,0:23:60.16:0,60,664	0/0:20,0:20:45.09:0,45,485	0/0:18,0:18:54.15:0,54,612	1/1:2,20:22:54.18:739,54,0	1/1:2,12:14:36.12:493,36,0	0/0:16,0:16:42.12:0,42,476	0/0:14,0:14:39.11:0,39,442	1/1:3,16:19:51.17:695,51,0	1/1:2,14:16:39.13:533,39,0	0/0:25,0:25:69.20:0,69,782	0/0:14,0:14:36.10:0,36,408	0/0:19,0:19:48.14:0,48,544	1/1:1,26:27:72.24:985,72,0	0/0:21,0:21:63.18:0,63,714	0/0:14,0:14:39.09:0,39,433	1/1:0,17:17:45.15:616,45,0	0/0:20,0:20:57.14:0,57,629	0/0:11,0:11:33.07:0,33,363	0/0:24,0:23:60.15:0,60,670	0/0:15,0:15:45.11:0,45,500	0/0:12,0:12:33.09:0,33,374	0/0:15,0:15:42.08:0,42,462	0/0:23,0:23:63.18:0,63,714	0/1:22,2:24:15.93:16,0,607	0/0:13,0:13:36.10:0,36,408	0/0:3,0:3:6.02:0,6,68
chr10	37701081	.	C	CCTCA	1538.77	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-4.969;DP=613;FS=1.749;HRun=0;HaplotypeScore=105.1971;InbreedingCoeff=0.9700;MQ=84.98;MQ0=0;MQRankSum=-5.056;QD=59.18;ReadPosRankSum=-0.480;VQSLOD=5.1201;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,108,1950	0/0:9,0:9:24.07:0,24,417	0/0:21,0:21:29.55:0,30,881	0/0:20,0:20:45.60:0,46,773	0/0:7,0:7:18.06:0,18,330	0/0:13,0:13:33.11:0,33,581	0/0:34,0:34:99:0,99,1743	0/0:17,0:17:42.14:0,42,784	0/0:29,0:29:84.26:0,84,1492	0/0:11,0:11:27.09:0,27,504	0/0:11,0:11:27.09:0,27,503	0/0:40,0:40:99:0,111,2003	0/0:23,0:23:66.21:0,66,1191	0/0:22,0:22:66.21:0,66,1199	0/0:31,0:31:84.24:0,84,1474	0/0:26,0:26:72.22:0,72,1282	0/0:37,0:37:99:0,105,1953	0/0:37,0:37:99:0,108,1883	0/0:16,0:16:45.09:0,45,771	0/0:9,0:9:21.06:0,21,361	0/0:50,0:50:99:0,138,2507	0/0:12,0:12:36.11:0,36,641	0/0:6,0:6:11.70:0,12,195	0/0:34,0:34:99:0,102,1869	0/0:12,0:12:27.08:0,27,474	1/1:4,12:16:45.15:1179,45,0	0/0:20,0:20:57.17:0,57,993	1/1:2,8:10:18.06:480,18,0
chr10	37704892	.	G	GCCTGTGCCT	14046.21	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-6.729;DP=600;FS=0.841;HRun=0;HaplotypeScore=165.8165;InbreedingCoeff=0.9703;MQ=70.15;MQ0=0;MQRankSum=-14.763;QD=61.88;ReadPosRankSum=-1.286;VQSLOD=4.4381;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:84.29:0,84,2212	1/1:4,4:9:15.05:587,15,0	0/0:16,0:16:30.02:0,30,699	0/0:13,0:13:33.07:0,33,713	0/0:12,0:12:36.12:0,36,983	0/0:15,0:15:42.12:0,42,1041	0/0:18,0:18:48.16:0,48,1355	1/1:28,4:34:42.14:1618,42,0	0/0:26,0:26:63.22:0,63,1769	0/0:23,0:23:48.16:0,48,1345	0/0:5,0:5:15.04:0,15,356	0/0:27,0:27:81.27:0,81,2194	1/1:11,17:29:69.24:3049,69,0	1/1:10,25:37:84.29:3676,84,0	0/0:39,0:39:99:0,108,3013	0/0:28,0:28:78.25:0,78,2102	0/0:28,0:28:78.27:0,78,2149	0/0:27,0:26:72.16:0,72,1896	1/1:13,1:15:24.08:996,24,0	1/1:7,6:14:12.51:543,13,0	1/1:22,7:34:12.04:499,12,0	1/1:7,2:11:9.03:317,9,0	0/0:6,0:6:15.05:0,15,396	0/0:27,0:27:57.20:0,57,1573	1/1:8,8:19:30.10:1341,30,0	0/0:20,0:20:54.19:0,54,1460	1/1:11,10:24:32.32:1419,32,0	0/0:8,0:8:12.04:0,12,328
chr10	37710656	.	TGGG	T	697.81	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=1.741;DP=427;FS=12.584;HRun=11;HaplotypeScore=72.1898;InbreedingCoeff=0.7551;MQ=74.34;MQ0=1;MQRankSum=1.098;QD=29.08;ReadPosRankSum=4.922;VQSLOD=1.2125;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:32:57.11:0,57,883	0/0:5,0:7:11.95:0,12,109	0/0:21,0:21:3.07:0,3,485	0/0:11,0:12:22.65:0,23,209	0/0:10,0:17:15.05:0,15,246	0/0:9,0:11:21.05:0,21,354	0/0:19,0:22:51.60:0,52,796	0/0:15,0:17:22.66:0,23,310	0/0:14,0:14:27.06:0,27,382	0/0:9,0:10:12.02:0,12,205	0/0:10,0:11:9.50:0,10,183	0/0:28,0:30:63.61:0,64,1058	0/0:12,0:12:21.07:0,21,359	0/0:9,0:9:15.05:0,15,266	0/0:13,0:14:28.79:0,29,478	0/0:9,0:13:14.64:0,15,184	0/0:20,0:24:45.62:0,46,726	0/0:26,0:27:51.14:0,51,841	0/0:7,0:8:12.02:0,12,186	0/0:9,0:9:15.05:0,15,241	0/0:20,0:20:27.09:0,27,473	0/0:13,0:13:15.05:0,15,245	0/0:9,0:9:12.04:0,12,203	0/0:16,0:17:36.10:0,36,605	0/0:10,0:10:6.02:0,6,106	1/1:3,17:20:51.14:656,51,0	0/0:12,0:13:30.06:0,30,459	1/1:0,4:4:12.04:158,12,0
chr10	37712034	.	CT	C	1206.69	PASS	AB=0.822;AC=24;AF=0.429;AN=56;BaseQRankSum=5.645;DP=452;FS=0.451;HRun=14;HaplotypeScore=61.3362;InbreedingCoeff=0.4916;MQ=70.63;MQ0=5;MQRankSum=-0.236;QD=5.56;ReadPosRankSum=2.180;VQSLOD=2.1766;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,1:30:25.50:0,25,414	1/1:3,2:6:10.92:67,11,0	0/0:16,1:15:4.77:0,5,102	0/0:12,0:9:5.63:0,6,31	0/0:18,0:18:30.90:0,31,274	0/0:13,0:13:21.02:0,21,195	0/1:13,3:16:25.81:26,0,193	1/1:11,13:26:34.46:224,34,0	0/0:15,0:14:3.39:0,3,162	0/1:14,0:15:7.80:8,0,150	0/1:14,2:17:23.14:23,0,94	0/0:10,0:13:16.06:0,16,178	1/1:1,9:12:18.94:115,19,0	1/1:3,6:9:8.90:62,9,0	0/0:14,0:15:26.19:0,26,269	0/0:14,0:14:9.41:0,9,218	0/0:27,1:31:38.25:0,38,493	0/0:15,2:18:0.70:0,1,272	1/1:5,14:20:40.53:264,41,0	1/1:7,6:18:19:88,19,0	0/1:7,1:8:13.01:63,0,13	1/1:5,8:13:21.88:135,22,0	0/0:17,1:22:14.25:0,14,269	0/0:15,0:15:24.45:0,24,208	0/1:8,4:14:2.25:93,0,2	0/1:5,0:14:6.54:32,0,7	1/1:10,7:21:15.62:182,16,0	1/1:1,0:5:7.66:22,8,0
chr10	37712764	.	AAAC	A	2898.73	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=10.878;DP=722;FS=4.417;HRun=0;HaplotypeScore=104.6260;InbreedingCoeff=0.9999;MQ=70.95;MQ0=1;MQRankSum=0.152;QD=32.21;ReadPosRankSum=3.645;VQSLOD=3.9641;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,132,2713	0/0:17,0:17:45.15:0,45,987	0/0:17,0:15:32.30:0,32,705	0/0:20,0:19:51.16:0,51,965	0/0:17,0:17:48.64:0,49,1029	0/0:21,0:21:60.19:0,60,1256	0/0:31,0:31:84.14:0,84,1747	0/0:28,0:28:78.22:0,78,1548	0/0:27,0:27:72.25:0,72,1461	0/0:30,0:30:87.21:0,87,1766	0/0:18,0:18:48.16:0,48,1030	1/1:3,38:41:81.23:1300,81,0	0/0:28,0:28:81.28:0,81,1696	0/0:23,0:23:69.22:0,69,1394	0/0:27,0:27:75.24:0,75,1581	0/0:25,0:25:75.26:0,75,1598	0/0:34,0:34:93.29:0,93,1927	0/0:20,0:20:48.03:0,48,915	0/0:24,0:24:69.23:0,69,1428	0/0:18,0:18:54.13:0,54,1019	0/0:49,0:49:99:0,141,2919	0/0:18,0:18:51.14:0,51,990	1/1:0,23:23:53.68:781,54,0	1/1:0,26:26:60.20:961,60,0	0/0:24,0:24:66.22:0,66,1359	0/0:30,0:30:90.30:0,90,1876	0/0:22,0:22:66.21:0,66,1276	0/0:18,0:18:48.16:0,48,946
chr10	37713261	.	TTTTTTTTTC	T	1287.66	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=4.942;DP=477;FS=12.948;HRun=0;HaplotypeScore=114.5320;InbreedingCoeff=0.7202;MQ=57.80;MQ0=28;MQRankSum=-2.220;QD=31.41;ReadPosRankSum=2.777;VQSLOD=2.1994;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:30:51.94:0,52,1507	0/0:4,0:3:6.02:0,6,171	0/0:33,0:13:29.13:0,29,613	0/0:24,0:10:17.62:0,18,287	0/0:14,0:14:41.66:0,42,996	0/0:14,0:13:36.08:0,36,1141	0/0:21,0:19:51.14:0,51,1632	0/0:34,0:32:60.77:0,61,2114	0/0:11,0:11:30.03:0,30,841	0/0:21,0:21:52.33:0,52,1599	0/0:15,0:14:41.69:0,42,1142	0/0:13,0:13:36.12:0,36,817	0/0:14,0:14:21.56:0,22,948	0/0:15,0:14:14.94:0,15,970	0/0:16,0:15:29.28:0,29,689	0/0:21,0:20:57.20:0,57,1752	0/0:23,0:22:50.30:0,50,1441	0/0:15,0:14:18.05:0,18,547	0/0:14,0:11:33.11:0,33,1047	0/0:16,0:16:42.13:0,42,1223	0/0:8,0:7:15.44:0,15,299	0/0:12,0:12:30.10:0,30,858	0/0:16,0:16:44.72:0,45,1305	0/1:10,0:8:13.52:14,0,442	0/0:16,0:16:42.12:0,42,1031	1/1:1,19:20:59.68:1097,60,0	0/0:15,0:12:36.12:0,36,996	1/1:6,5:6:12.04:301,12,0
chr10	37713269	.	TC	T	1019.27	PASS	AB=0.972;AC=31;AF=0.554;AN=56;BaseQRankSum=3.606;DP=362;FS=0.610;HRun=2;HaplotypeScore=48.8891;InbreedingCoeff=0.7226;MQ=48.18;MQ0=24;MQRankSum=-3.712;QD=5.42;ReadPosRankSum=1.344;VQSLOD=0.6886;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:22:23.78:0,24,182	1/1:5,0:4:8.09:43,8,0	0/1:15,0:5:1.28:1,0,50	0/1:10,1:5:2.48:2,0,20	0/0:15,0:15:14.57:0,15,91	0/0:10,0:9:14.78:0,15,101	0/0:20,0:18:35.78:0,36,284	1/1:16,1:17:25.49:157,25,0	0/0:12,0:12:23.09:0,23,163	0/0:16,0:17:35.84:0,36,291	0/0:13,0:12:11.93:0,12,103	1/1:6,0:6:5.24:22,5,0	1/1:8,0:8:10.74:64,11,0	1/1:13,1:13:16.72:108,17,0	0/0:12,0:11:14.63:0,15,86	0/0:16,0:14:26.35:0,26,217	0/0:20,1:20:1.70:0,2,206	0/0:14,0:13:17.97:0,18,152	1/1:9,0:7:7.01:38,7,0	1/1:11,0:11:12.46:68,12,0	1/1:9,0:8:13.96:97,14,0	1/1:6,0:6:3.53:10,4,0	0/1:13,0:13:3.63:14,0,4	1/1:7,0:5:6.34:36,6,0	1/1:13,1:14:13.22:77,13,0	1/1:20,0:20:58.39:358,58,0	1/1:11,0:9:10.24:61,10,0	1/1:11,0:6:11.65:66,12,0
chr10	37713688	.	TTG	T	2559.65	PASS	AC=12;AF=0.222;AN=54;BaseQRankSum=0.996;DP=465;FS=1.179;HRun=0;HaplotypeScore=81.2638;InbreedingCoeff=0.9359;MQ=74.51;MQ0=17;MQRankSum=-0.146;QD=27.23;ReadPosRankSum=1.591;VQSLOD=4.4357;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:29,1:30:68.62:909,69,0	0/0:2,0:2:6.02:0,6,95	0/0:35,0:13:33.03:0,33,515	0/0:40,0:23:60.07:0,60,874	0/0:6,0:6:15.05:0,15,247	1/1:13,1:14:33.10:436,33,0	./.	0/0:15,0:15:41.64:0,42,702	0/0:13,0:13:33.04:0,33,498	1/1:10,1:11:23.94:312,24,0	1/1:7,0:5:9.03:125,9,0	0/0:20,0:20:54.13:0,54,763	0/0:7,0:7:9.03:0,9,143	0/0:19,0:19:41.74:0,42,593	1/1:12,2:14:27.08:354,27,0	0/0:20,0:20:43.03:0,43,682	0/0:24,0:24:63.20:0,63,963	1/1:18,0:18:48.11:606,48,0	0/0:15,0:14:39.13:0,39,652	0/0:9,0:9:12.49:0,12,167	0/0:39,0:38:75.69:0,76,1144	0/0:11,0:11:24.51:0,25,355	0/0:6,0:6:11.71:0,12,135	0/0:26,0:26:60.15:0,60,885	0/0:11,0:10:24.05:0,24,348	0/0:7,0:7:21.07:0,21,356	0/0:8,0:8:23.96:0,24,278	0/0:7,0:7:17.97:0,18,180
chr10	37713691	.	TGTACAC	T	2895.84	PASS	AB=0.533;AC=13;AF=0.232;AN=56;BaseQRankSum=2.827;DP=473;FS=0.000;HRun=0;HaplotypeScore=105.1074;InbreedingCoeff=0.8644;MQ=71.42;MQ0=20;MQRankSum=-2.249;QD=22.62;ReadPosRankSum=1.314;VQSLOD=3.0068;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:30:68.34:908,68,0	0/0:2,0:2:6.02:0,6,95	0/0:33,0:11:33.03:0,33,515	0/0:39,0:22:60.07:0,60,875	0/0:5,0:5:15.05:0,15,304	1/1:12,1:14:33.11:546,33,0	0/1:4,28:31:0.01:0,0,0	0/0:16,0:16:44.79:0,45,722	0/0:16,0:15:32.98:0,33,717	1/1:11,1:13:21.02:408,21,0	1/1:8,0:6:9.03:125,9,0	0/0:22,0:22:53.58:0,54,717	0/0:7,0:6:13.76:0,14,209	0/0:17,0:17:27.78:0,28,538	1/1:11,1:13:27.09:428,27,0	0/0:20,0:20:45.63:0,46,939	0/0:25,0:25:69.21:0,69,1201	1/1:15,1:18:48.12:662,48,0	0/0:14,0:13:39.13:0,39,652	0/0:8,0:8:12.49:0,12,161	0/0:41,0:40:75.69:0,76,1112	0/0:11,0:11:15.70:0,16,327	0/0:7,0:7:11.71:0,12,135	0/0:26,0:26:34.14:0,34,847	0/0:12,0:10:16.85:0,17,284	0/0:7,0:7:21.07:0,21,356	0/0:8,0:8:2.58:0,3,194	0/0:9,0:8:7.47:0,7,124
chr10	37713693	.	TACACACACAC	T	906.09	PASS	AB=0.911;AC=17;AF=0.354;AN=48;BaseQRankSum=2.676;DP=490;FS=4.678;HRun=0;HaplotypeScore=136.2832;InbreedingCoeff=0.3993;MQ=67.88;MQ0=23;MQRankSum=-3.535;QD=6.21;ReadPosRankSum=-1.147;VQSLOD=2.0397;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:10.09:0,10,111	./.	./.	./.	0/0:6,0:6:3.01:0,3,138	0/0:15,0:15:2.94:0,3,128	0/0:35,0:34:4.37:0,4,75	0/0:17,0:17:2.37:0,2,8	0/0:15,0:17:18.06:0,18,677	0/0:13,0:13:9.96:0,10,247	0/0:10,0:7:2.22:0,2,7	0/0:20,0:22:24.08:0,24,473	0/0:7,0:6:3.48:0,3,139	1/1:13,2:15:5.91:157,6,0	0/1:14,0:14:2.78:3,0,50	0/0:21,0:22:21.07:0,21,882	0/0:27,0:27:18.06:0,18,679	0/1:18,0:17:63.01:63,0,147	./.	1/1:8,0:8:3.01:45,3,0	1/1:43,0:41:7.83:132,8,0	1/1:9,1:10:3.01:88,3,0	0/0:8,0:9:3.01:0,3,65	0/0:25,0:26:17.65:0,18,325	1/1:11,1:10:7.57:159,8,0	1/1:8,0:8:2.94:18,3,0	1/1:5,2:7:9.03:262,9,0	0/1:7,0:10:99:128,0,211
chr10	37715291	.	AC	A	3728.90	PASS	AB=0.863;AC=27;AF=0.482;AN=56;BaseQRankSum=-0.895;DP=476;FS=0.443;HRun=10;HaplotypeScore=69.5790;InbreedingCoeff=0.4155;MQ=89.04;MQ0=1;MQRankSum=-0.704;QD=11.95;ReadPosRankSum=4.331;VQSLOD=3.2457;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:14:5.77:0,6,31	1/1:0,6:6:18:156,18,0	0/1:23,1:24:14.22:14,0,176	0/0:26,0:19:29.60:0,30,242	0/1:16,2:18:16.02:16,0,293	0/0:5,0:12:5.96:0,6,44	0/0:14,0:28:14.91:0,15,83	1/1:7,14:23:48.10:382,48,0	0/0:14,0:14:27.07:0,27,298	0/0:8,0:9:3.35:0,3,15	0/0:8,0:8:3:0,3,26	0/0:7,0:17:26.23:0,26,197	1/1:4,11:16:32.02:265,32,0	1/1:1,17:18:44.99:391,45,0	0/0:7,0:13:5.72:0,6,29	0/1:14,5:19:88.15:88,0,242	0/1:25,3:28:21.02:21,0,455	0/0:6,0:13:11.69:0,12,76	1/1:7,10:18:35.02:292,35,0	1/1:8,19:27:56:474,56,0	1/1:5,23:32:77:607,77,0	1/1:4,13:17:41.69:363,42,0	0/0:7,0:10:23.39:0,23,182	0/1:8,1:12:7.88:8,0,104	1/1:1,14:15:38.99:338,39,0	0/1:12,5:17:51.10:51,0,172	1/1:2,8:10:23.97:208,24,0	0/1:8,3:11:54.07:54,0,142
chr10	37718775	.	T	TAA	1271.87	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-2.454;DP=576;FS=13.871;HRun=3;HaplotypeScore=72.7127;InbreedingCoeff=0.9532;MQ=85.32;MQ0=1;MQRankSum=-3.534;QD=38.54;ReadPosRankSum=-0.738;VQSLOD=2.1639;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:93.33:0,93,1337	0/0:4,0:4:12.04:0,12,168	0/0:21,0:21:60.20:0,60,807	0/0:17,0:17:45.06:0,45,562	0/0:24,0:24:69.21:0,69,947	0/0:22,0:22:66.20:0,66,905	0/0:27,0:27:78.25:0,78,1071	0/0:23,0:23:57.18:0,57,781	0/0:14,0:14:42.14:0,42,587	0/0:16,0:16:48.16:0,48,672	0/0:10,0:10:26.58:0,27,376	0/0:21,0:20:57.17:0,57,778	0/0:16,0:16:45.10:0,45,574	0/0:19,0:19:54.14:0,54,733	0/0:18,0:18:48.16:0,48,671	0/0:17,0:17:51.17:0,51,714	0/0:26,0:26:75.15:0,75,956	0/0:18,0:18:54.16:0,54,736	0/0:22,0:22:63.20:0,63,867	0/0:10,0:10:27.09:0,27,378	0/0:59,0:59:99:0,172,2353	0/0:16,0:16:45.12:0,45,595	0/0:13,0:13:36.12:0,36,502	0/0:30,0:30:84.25:0,84,1140	0/0:23,0:23:66.21:0,66,906	1/1:3,17:20:9.19:838,9,0	0/0:22,0:22:66.19:0,66,886	1/1:2,10:12:30.10:549,30,0
chr10	37718927	.	T	TA	3667.96	PASS	AB=0.615;AC=35;AF=0.625;AN=56;BaseQRankSum=-2.800;DP=449;FS=3.194;HRun=13;HaplotypeScore=52.5159;InbreedingCoeff=0.2539;MQ=68.65;MQ0=0;MQRankSum=1.558;QD=10.36;ReadPosRankSum=-1.852;VQSLOD=2.4380;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:11,18:30:15.90:272,0,16	1/1:1,1:11:17.16:91,17,0	0/0:11,0:5:7.11:0,7,33	0/0:18,0:11:3.61:0,4,45	0/0:21,1:22:16.71:0,17,258	0/1:6,24:31:10.27:463,0,10	1/1:3,10:14:20.20:217,20,0	0/1:10,8:18:28.95:165,0,29	0/0:9,0:9:14.78:0,15,103	0/1:7,8:16:2.73:108,0,3	0/1:7,14:21:5.18:230,0,5	1/1:4,7:11:4.19:22,4,0	1/1:2,1:11:5.68:29,6,0	1/1:1,1:10:2.84:14,3,0	1/1:1,11:12:9.01:84,9,0	0/0:8,0:11:26.92:0,27,160	0/0:19,1:21:6.79:0,7,183	0/1:7,7:17:46.45:174,0,46	1/1:9,10:20:15.26:260,15,0	0/1:8,10:20:4.60:196,0,5	1/1:1,12:14:26.87:237,27,0	1/1:1,1:9:18.09:102,18,0	0/1:7,10:17:14.13:168,0,14	1/1:2,13:16:24.75:212,25,0	1/1:3,0:14:10.34:48,10,0	1/1:1,10:12:26.84:227,27,0	0/1:3,14:17:7.52:168,0,8	1/1:5,7:13:20.86:181,21,0
chr10	37719391	.	CT	C	702.90	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=4.947;DP=577;FS=4.152;HRun=3;HaplotypeScore=55.7124;InbreedingCoeff=0.9397;MQ=74.86;MQ0=0;MQRankSum=-0.628;QD=28.12;ReadPosRankSum=0.903;VQSLOD=2.7078;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,117,1726	0/0:11,0:11:33.11:0,33,492	0/0:15,0:15:39.12:0,39,543	0/0:21,0:21:57.18:0,57,818	0/0:21,0:21:63.20:0,63,923	0/0:16,0:16:48.14:0,48,678	0/0:25,0:25:75.24:0,75,1105	0/0:26,0:26:78.26:0,78,1152	0/0:16,0:16:48.16:0,48,717	0/0:19,0:19:57.18:0,57,836	0/0:11,0:11:33.11:0,33,494	0/0:22,0:22:63.21:0,63,943	0/0:17,0:17:51.17:0,51,764	0/0:24,0:24:72.23:0,72,1056	0/0:14,0:13:42.14:0,42,628	0/0:20,0:20:57.17:0,57,813	0/0:33,0:33:99:0,99,1456	0/0:32,0:32:96.32:0,96,1433	0/0:24,0:24:66.19:0,66,927	0/0:12,0:12:36.12:0,36,539	0/0:42,0:42:99:0,126,1888	0/0:15,0:15:45.15:0,45,674	0/0:10,0:10:27.09:0,27,403	0/0:30,0:30:90.30:0,90,1345	0/0:11,0:11:33.11:0,33,495	1/1:1,16:17:6.18:578,6,0	0/0:25,0:25:72.24:0,72,1077	1/1:0,8:8:18.06:234,18,0
chr10	37720048	.	TG	T	1636.63	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.454;DP=666;FS=6.300;HRun=3;HaplotypeScore=63.9890;InbreedingCoeff=0.9988;MQ=84.88;MQ0=0;MQRankSum=-2.590;QD=29.76;ReadPosRankSum=2.284;VQSLOD=3.2795;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,117,1644	0/0:10,0:10:27.09:0,27,386	0/0:21,0:21:54.18:0,54,742	0/0:21,0:21:50.24:0,50,672	0/0:22,0:22:54.15:0,54,739	0/0:20,0:20:51.17:0,51,733	0/0:33,0:33:93.30:0,93,1320	0/0:34,0:34:99:0,102,1421	0/0:16,0:16:45.14:0,45,629	0/0:29,0:29:81.26:0,81,1137	0/0:14,0:14:39.11:0,39,538	1/1:0,21:21:54.17:669,54,0	0/0:27,0:27:72.23:0,72,1017	0/0:20,0:20:60.17:0,60,826	0/0:24,0:24:72.23:0,72,1018	0/0:23,0:23:69.22:0,69,976	0/0:28,0:28:84.28:0,84,1208	0/0:32,0:32:96.31:0,96,1364	0/0:24,0:24:72.24:0,72,1036	0/0:20,0:20:57.18:0,57,801	0/0:66,0:66:99:0,196,2751	0/0:12,0:12:30.10:0,30,432	1/1:2,10:12:36.11:441,36,0	1/1:1,21:22:54.17:669,54,0	0/0:10,0:10:27.09:0,27,388	0/0:19,0:19:54.15:0,54,739	0/0:35,0:34:99:0,102,1433	0/0:11,0:11:30.10:0,30,432
chr10	37720658	.	GCTCTCTCT	G	33.06	PASS	AB=0.706;AC=5;AF=0.093;AN=54;BaseQRankSum=0.703;DP=601;FS=0.000;HRun=0;HaplotypeScore=156.6230;InbreedingCoeff=0.5159;MQ=69.20;MQ0=21;MQRankSum=-2.078;QD=0.67;ReadPosRankSum=0.525;VQSLOD=2.7170;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:21.06:0,21,623	0/0:8,0:7:2.44:0,2,6	0/0:37,0:23:0.47:0,0,1	0/0:45,0:24:2.99:0,3,23	./.	0/0:21,0:18:15.05:0,15,494	0/0:29,0:27:19.96:0,20,504	0/0:29,0:28:27.87:0,28,748	0/1:7,4:12:0.05:0,0,1	0/0:21,0:21:27.09:0,27,795	0/0:19,0:18:15:0,15,408	0/0:16,0:16:21.07:0,21,639	0/0:16,0:16:7.27:0,7,191	0/0:27,0:26:24.55:0,25,816	0/0:22,0:21:30.10:0,30,924	1/1:10,8:19:3:70,3,0	1/1:15,0:18:3.01:56,3,0	0/0:13,0:12:12.04:0,12,378	0/0:23,0:23:23.29:0,23,770	0/0:20,0:20:7.57:0,8,204	0/0:26,0:25:33.10:0,33,1045	0/0:19,0:19:6.02:0,6,203	0/0:14,0:14:30.08:0,30,746	0/0:25,0:25:30.10:0,30,1040	0/0:12,0:12:3.01:0,3,118	0/0:29,0:28:38.34:0,38,1008	0/0:19,0:15:26.28:0,26,715	0/0:18,0:17:14.82:0,15,132
chr10	37720701	.	CTGTGAGTGTGTGTGTGTG	C	1668.86	PASS	AB=0.996;AC=17;AF=0.340;AN=50;BaseQRankSum=-2.625;DP=490;FS=41.707;HRun=0;HaplotypeScore=204.5155;InbreedingCoeff=-0.2177;MQ=41.68;MQ0=25;MQRankSum=1.358;QD=6.16;ReadPosRankSum=-0.720;VQSLOD=1.4285;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:13.59:0,14,1719	./.	./.	./.	0/0:18,0:17:12.51:0,13,847	0/1:22,0:22:35.36:35,0,330	0/0:29,0:27:8.37:0,8,373	0/0:29,0:26:18.14:0,18,1402	0/0:19,0:19:22.87:0,23,1504	0/1:17,0:16:54.97:55,0,1704	0/1:15,0:12:59.70:60,0,481	0/1:21,0:21:47.59:48,0,1012	0/0:16,0:16:19.48:0,19,1044	0/1:27,0:26:59.94:60,0,812	0/1:16,0:14:90.76:91,0,351	0/0:18,0:18:13.27:0,13,794	0/0:25,0:24:33.59:0,34,2405	0/1:9,0:8:37.56:38,0,863	0/0:16,0:13:2.06:0,2,1674	0/1:16,0:16:35.56:36,0,588	0/1:23,0:21:9.96:10,0,1768	0/1:12,0:12:26.24:26,0,543	0/1:18,0:19:67.73:68,0,383	0/1:23,0:23:99:108,0,1189	0/0:12,0:11:3.01:0,3,212	1/1:16,0:16:38.68:518,39,0	0/1:20,0:17:68.48:68,0,1180	1/1:3,9:9:12.04:605,12,0
chr10	37720706	.	A	AGTGTGT	1932.49	PASS	AB=1.000;AC=28;AF=0.538;AN=52;BaseQRankSum=-1.121;DP=486;FS=8.981;HRun=0;HaplotypeScore=152.4016;InbreedingCoeff=0.3883;MQ=42.04;MQ0=24;MQRankSum=-0.383;QD=5.91;ReadPosRankSum=-3.601;VQSLOD=0.9976;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:32,0:32:16.29:371,16,0	1/1:6,0:6:3:25,3,0	./.	./.	0/0:17,0:16:14.58:0,15,248	1/1:18,3:24:3.95:60,4,0	1/1:27,1:28:13.41:198,13,0	0/1:30,0:27:3.11:101,0,3	0/0:18,0:18:16.96:0,17,343	1/1:19,1:19:10.38:196,10,0	0/0:15,0:12:6.02:0,6,116	0/0:20,0:20:14.28:0,14,194	0/1:14,0:14:81.44:81,0,84	1/1:21,0:21:7.27:114,7,0	1/1:19,0:17:4.86:30,5,0	0/0:17,0:18:9.03:0,9,153	0/0:27,0:26:31.77:0,32,471	0/1:9,0:8:4.17:115,0,4	0/1:18,0:15:2.68:177,0,3	0/1:14,0:14:9.67:31,0,10	1/1:22,0:20:19.14:336,19,0	1/1:14,0:13:14.78:139,15,0	0/0:18,0:18:3.01:0,3,44	0/1:23,0:22:24.07:24,0,206	1/1:12,0:12:3.01:30,3,0	0/0:15,0:13:6.02:0,6,76	1/1:16,0:15:1.96:76,2,0	0/0:11,0:9:10.58:0,11,129
chr10	37721872	.	T	TTCTCTCTC	1488.75	PASS	AB=0.902;AC=22;AF=0.393;AN=56;BaseQRankSum=-1.360;DP=466;FS=19.463;HRun=0;HaplotypeScore=126.0868;InbreedingCoeff=0.3667;MQ=63.83;MQ0=19;MQRankSum=-2.412;QD=5.51;ReadPosRankSum=-2.916;VQSLOD=0.2385;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:27:33.66:91,0,34	0/0:5,0:5:3.01:0,3,57	1/1:21,0:13:0.47:1,0,0	0/1:42,0:17:0:0,0,0	0/0:15,0:21:14.88:0,15,163	1/1:22,0:22:14.82:273,15,0	1/1:8,9:21:6.49:150,6,0	0/0:17,0:14:0.47:0,0,1	0/1:13,0:13:31.76:32,0,32	1/1:25,0:25:28.80:518,29,0	1/1:13,0:13:6.02:77,6,0	0/0:9,0:9:6.91:0,7,114	0/0:9,0:8:9.03:0,9,176	0/0:12,0:11:15.03:0,15,250	0/1:9,0:17:57.07:64,0,57	0/1:6,0:11:8.05:8,0,63	0/0:13,0:21:11.29:0,11,132	0/1:9,0:9:68.93:162,0,69	1/1:12,0:12:0.60:2,1,0	0/0:9,0:9:13.29:0,13,263	0/0:16,0:16:6.49:0,6,127	0/0:19,0:19:24.79:0,25,424	0/0:18,0:18:5.88:0,6,36	0/0:15,0:15:2.88:0,3,15	0/0:9,0:9:12.43:0,12,196	1/1:19,0:19:15.34:231,15,0	0/0:13,0:12:6.49:0,6,143	1/1:17,0:16:10.90:47,11,0
chr10	37721899	.	TCTCTCTCTCTC	T	534.61	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=4.485;DP=465;FS=2.128;HRun=0;HaplotypeScore=120.1015;InbreedingCoeff=0.6798;MQ=48.69;MQ0=34;MQRankSum=-4.289;QD=7.98;ReadPosRankSum=0.333;VQSLOD=2.4668;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:25:27.43:0,27,420	0/0:4,0:3:8.82:0,9,162	0/0:26,0:8:20.56:0,21,256	0/0:42,0:5:9:0,9,119	0/0:25,0:23:51.12:0,51,1256	0/0:20,0:20:31.27:0,31,657	0/0:22,0:22:21.07:0,21,381	0/0:15,0:9:21.06:0,21,450	0/0:14,0:14:39.11:0,39,843	0/0:23,0:23:66.21:0,66,1896	0/0:17,0:17:20.37:0,20,467	1/1:4,11:14:8.19:284,8,0	0/0:10,0:9:18.91:0,19,443	0/0:11,0:10:23.67:0,24,594	0/0:17,0:17:21.50:0,21,575	0/0:10,0:10:24.06:0,24,524	0/0:19,0:18:15.87:0,16,829	0/0:12,0:12:33.11:0,33,997	0/0:9,0:8:15.50:0,15,307	0/0:11,0:11:16.01:0,16,461	0/0:12,0:11:23.95:0,24,322	0/0:16,0:16:42.14:0,42,1157	1/1:4,12:14:11.99:214,12,0	1/1:3,10:12:3.01:81,3,0	0/0:11,0:11:20.65:0,21,375	0/1:23,0:21:84.67:85,0,830	0/0:11,0:10:17.10:0,17,444	0/0:15,0:12:20.91:0,21,911
chr10	37721910	.	C	CT	787.49	PASS	AB=0.979;AC=13;AF=0.232;AN=56;BaseQRankSum=5.779;DP=473;FS=2.061;HRun=1;HaplotypeScore=74.2045;InbreedingCoeff=0.3629;MQ=48.95;MQ0=32;MQRankSum=-2.321;QD=5.18;ReadPosRankSum=4.353;VQSLOD=0.7481;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,2:28:36.15:0,36,338	0/0:5,0:4:5.54:0,6,25	0/0:35,0:8:23.14:0,23,223	0/0:38,0:7:8.19:0,8,91	0/0:28,0:26:15.55:0,16,482	0/1:18,0:18:66.91:67,0,188	0/0:19,0:19:3.24:0,3,181	0/0:16,0:9:5.23:0,5,40	0/1:14,0:14:9.58:10,0,231	0/1:19,0:19:36:36,0,287	0/0:17,0:17:24.05:0,24,263	1/1:14,1:14:5.26:31,5,0	0/0:9,0:9:10.06:0,10,73	0/0:12,0:12:23.80:0,24,186	0/0:21,0:21:7.17:0,7,218	0/0:10,0:10:14.77:0,15,203	0/1:18,0:17:6.88:7,0,165	0/0:10,1:11:15.75:0,16,267	0/0:9,0:7:10.73:0,11,71	0/0:15,0:14:21.32:0,21,150	0/0:13,0:12:20.96:0,21,194	0/0:13,0:13:26.35:0,26,245	0/1:15,2:15:6.16:22,0,6	1/1:13,0:12:2.04:6,2,0	0/0:12,0:12:15.79:0,16,91	1/1:17,5:18:48.53:510,49,0	0/0:9,0:8:11.18:0,11,80	1/1:9,7:12:26.97:257,27,0
chr10	37721911	.	C	CT	66.64	PASS	AB=0.815;AC=3;AF=0.054;AN=56;BaseQRankSum=5.754;DP=477;FS=17.253;HRun=0;HaplotypeScore=75.6585;InbreedingCoeff=0.5024;MQ=48.95;MQ0=31;MQRankSum=-1.621;QD=1.90;ReadPosRankSum=1.206;VQSLOD=0.8536;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:48.48:0,48,487	0/0:5,0:4:5.59:0,6,26	0/0:36,0:9:23.86:0,24,279	0/0:38,0:7:8.22:0,8,124	0/0:27,0:26:65.54:0,66,701	0/0:20,0:19:28.06:0,28,349	0/0:19,0:19:12.27:0,12,226	0/0:16,0:9:11.93:0,12,106	0/0:14,0:14:36.52:0,37,434	0/0:20,0:20:24.07:0,24,471	0/0:17,0:17:23.74:0,24,293	0/0:16,0:15:9.38:0,9,33	0/0:9,0:9:16.01:0,16,118	0/0:12,0:12:23.75:0,24,178	0/0:21,0:21:34.06:0,34,337	0/0:11,0:11:24.07:0,24,315	0/0:18,0:17:20.74:0,21,283	0/0:11,0:11:25.86:0,26,335	0/0:8,0:6:12.03:0,12,129	0/0:15,0:14:25.07:0,25,183	0/0:14,0:13:21.01:0,21,211	0/0:13,0:13:30.21:0,30,274	0/0:17,0:15:0.32:0,0,2	1/1:13,0:12:2.92:17,3,0	0/0:12,0:12:3.88:0,4,127	0/1:17,5:18:0.59:138,0,1	0/0:8,0:7:15.35:0,15,109	0/0:16,0:12:18.79:0,19,101
chr10	37722953	.	TGTGTGAGAGAGAGAGAGAGAGAGA	T	8031.11	PASS	AB=1.000;AC=18;AF=0.321;AN=56;BaseQRankSum=6.102;DP=638;FS=3.558;HRun=0;HaplotypeScore=346.3053;InbreedingCoeff=0.5752;MQ=54.06;MQ0=10;MQRankSum=-4.234;QD=33.89;ReadPosRankSum=1.534;VQSLOD=2.5522;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:12:17.74:260,18,0	0/0:15,0:15:10.95:0,11,151	0/0:15,0:6:7.75:0,8,105	0/0:13,0:9:20.74:0,21,341	0/0:37,0:37:74.94:0,75,4854	1/1:3,15:18:24.08:1493,24,0	1/1:2,17:19:9.03:565,9,0	0/1:25,0:24:53.98:54,0,577	0/0:22,0:22:51.21:0,51,2675	1/1:4,37:41:93.44:2558,93,0	1/1:6,16:24:30.10:1904,30,0	0/0:24,0:24:53.28:0,53,1887	0/0:16,0:16:2.98:0,3,72	0/0:18,0:18:12:0,12,294	1/1:1,15:16:9.03:575,9,0	0/0:17,0:17:47.45:0,47,2603	0/0:32,0:31:90.14:0,90,4447	1/1:1,12:13:6.01:225,6,0	0/0:11,0:10:11.22:0,11,197	0/1:24,0:24:13.21:13,0,846	0/0:25,0:24:27.09:0,27,1050	0/0:36,0:36:21.03:0,21,493	0/0:31,0:31:53.49:0,53,3099	0/0:40,0:40:86.30:0,86,4577	0/0:27,0:27:33.11:0,33,881	0/1:29,0:28:99:231,0,1112	0/0:21,0:21:7.85:0,8,310	0/1:10,0:10:99:154,0,262
chr10	37722955	.	TGTGAGAGAGAGA	T	7883.86	PASS	AB=0.937;AC=36;AF=0.643;AN=56;BaseQRankSum=2.740;DP=627;FS=0.000;HRun=0;HaplotypeScore=239.9023;InbreedingCoeff=0.4338;MQ=54.05;MQ0=10;MQRankSum=-7.547;QD=16.70;ReadPosRankSum=1.371;VQSLOD=3.2604;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:12:17.92:138,18,0	1/1:2,12:15:9.22:220,9,0	0/0:14,0:5:2.20:0,2,36	0/0:10,0:6:17.89:0,18,163	0/0:37,0:37:75.02:0,75,1955	1/1:17,0:17:24.08:644,24,0	1/1:19,0:19:9.03:251,9,0	1/1:25,0:24:35.87:447,36,0	0/0:22,0:22:48.48:0,48,907	1/1:41,0:41:83.31:1033,83,0	1/1:23,0:23:30.10:822,30,0	0/0:24,0:24:53.27:0,53,631	1/1:2,14:16:2.54:114,3,0	1/1:4,14:18:12.04:447,12,0	1/1:17,0:15:9.03:252,9,0	0/0:17,0:17:47.58:0,48,1146	0/1:32,0:31:40.28:40,0,1396	1/1:13,0:13:6:107,6,0	1/1:11,0:10:24.01:215,24,0	1/1:21,3:24:32.80:420,33,0	0/1:24,0:23:14.28:227,0,14	1/1:9,28:36:20.69:726,21,0	0/0:31,0:31:48:0,48,844	0/1:40,0:40:41.14:41,0,1101	0/1:11,16:28:50.80:667,0,51	0/1:27,0:26:99:309,0,309	1/1:1,18:20:14.36:522,14,0	0/1:9,0:9:99:243,0,101
chr10	37722957	.	TGAGAGAGAGAGA	T	5948.63	PASS	AB=0.692;AC=31;AF=0.646;AN=48;BaseQRankSum=8.394;DP=623;FS=4.524;HRun=0;HaplotypeScore=246.1987;InbreedingCoeff=0.6897;MQ=53.96;MQ0=10;MQRankSum=-9.973;QD=17.04;ReadPosRankSum=2.705;VQSLOD=3.6917;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	1/1:14,0:14:6.49:180,6,0	./.	./.	0/0:40,0:40:62.75:0,63,1984	1/1:18,0:17:24.08:631,24,0	1/1:19,0:19:9.03:250,9,0	0/0:23,0:22:5.95:0,6,42	0/0:23,0:23:24.55:0,25,854	1/1:41,0:41:20.55:581,21,0	1/1:24,0:23:30.10:815,30,0	0/0:21,0:24:17.37:0,17,314	1/1:15,1:16:2.54:96,3,0	1/1:17,1:18:12.04:376,12,0	1/1:18,0:15:9.03:250,9,0	0/0:18,0:18:26.62:0,27,1105	0/0:30,0:30:1.22:0,1,1262	1/1:13,0:13:3.01:84,3,0	./.	1/1:20,0:24:5.68:171,6,0	1/1:23,0:22:2.99:25,3,0	1/1:34,3:36:21.07:601,21,0	0/0:27,0:29:38.97:0,39,719	0/0:34,0:41:13.10:0,13,1017	1/1:23,4:28:21.07:660,21,0	1/1:22,0:26:15.05:429,15,0	1/1:19,1:20:14.53:475,15,0	0/1:5,0:9:87.21:324,0,87
chr10	37723076	.	TTAC	T	598.04	PASS	AB=0.914;AC=3;AF=0.054;AN=56;BaseQRankSum=9.278;DP=1046;FS=8.863;HRun=0;HaplotypeScore=145.5084;InbreedingCoeff=0.6340;MQ=55.88;MQ0=35;MQRankSum=-4.539;QD=12.72;ReadPosRankSum=1.305;VQSLOD=2.9136;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:41:92.79:0,93,1731	0/0:16,0:15:45.13:0,45,943	0/0:45,0:27:45.39:0,45,995	0/0:43,0:30:75.92:0,76,1180	0/0:20,0:20:57.19:0,57,1216	0/0:30,0:24:12.48:0,12,1102	0/0:65,0:61:99:0,159,3318	0/0:35,0:33:99:0,99,1908	0/0:41,0:36:52.53:0,53,1829	0/0:42,1:38:99:0,108,2106	0/0:9,0:9:27.09:0,27,570	0/0:42,1:39:99:0,102,2233	0/0:33,0:29:84.25:0,84,1828	0/0:41,0:39:97.84:0,98,2132	0/0:60,0:55:99:0,140,3245	0/0:33,0:32:56.85:0,57,1639	0/0:40,0:38:89.86:0,90,1975	0/0:29,0:28:62.96:0,63,1174	0/0:29,1:23:60.10:0,60,1089	0/0:31,0:29:84.21:0,84,1756	0/0:98,2:68:99:0,159,3533	0/0:25,0:22:57.11:0,57,1172	0/0:15,0:14:42.12:0,42,851	0/0:83,1:77:99:0,163,3849	0/0:19,0:16:48.07:0,48,930	0/1:29,2:30:99:386,0,212	0/0:21,0:21:57.19:0,57,1253	1/1:13,2:15:29.22:318,29,0
chr10	37723085	.	C	CCAT	1025.10	PASS	AB=0.870;AC=3;AF=0.054;AN=56;BaseQRankSum=9.052;DP=1220;FS=15.184;HRun=0;HaplotypeScore=160.4395;InbreedingCoeff=0.6471;MQ=48.17;MQ0=110;MQRankSum=-5.857;QD=15.53;ReadPosRankSum=1.528;VQSLOD=2.7624;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:61,0:48:86.87:0,87,1215	0/0:19,0:18:46.35:0,46,689	0/0:41,0:22:56.74:0,57,793	0/0:44,0:31:71.04:0,71,993	0/0:23,0:21:57.14:0,57,879	0/0:37,0:25:45.05:0,45,851	0/0:83,0:67:99:0,135,2279	0/0:45,0:29:81.21:0,81,1312	0/0:42,0:35:83.66:0,84,1311	0/0:54,0:36:99:0,99,1478	0/0:12,0:11:27.01:0,27,416	0/0:52,0:46:99:0,117,1717	0/0:34,0:29:81.19:0,81,1282	0/0:49,0:42:99:0,111,1725	0/0:62,0:57:99:0,142,2262	0/0:38,0:35:81.13:0,81,1266	0/0:43,0:40:95.79:0,96,1445	0/0:32,0:31:39.01:0,39,862	0/0:34,0:22:52.79:0,53,718	0/0:35,0:28:75.19:0,75,1228	0/0:133,0:80:99:0,179,2632	0/0:29,0:23:57.17:0,57,905	0/0:19,0:12:36.03:0,36,519	0/0:89,0:79:99:0,179,2805	0/0:22,0:18:45.12:0,45,674	0/1:40,7:33:99:592,0,191	0/0:21,0:21:57.17:0,57,897	1/1:14,5:17:36.06:539,36,0
chr10	37723157	.	T	TCAC	117.16	PASS	AB=0.885;AC=3;AF=0.056;AN=54;BaseQRankSum=2.709;DP=1306;FS=3.171;HRun=0;HaplotypeScore=167.1793;InbreedingCoeff=0.3232;MQ=36.62;MQ0=231;MQRankSum=-5.337;QD=2.17;ReadPosRankSum=-2.139;VQSLOD=2.5841;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:76,0:41:49.22:0,49,872	0/0:12,0:8:5.69:0,6,56	./.	0/0:22,0:1:2.94:0,3,18	0/0:29,0:19:39.08:0,39,536	0/0:35,0:17:36.04:0,36,479	0/0:73,0:43:66.08:0,66,846	0/0:52,0:15:23.68:0,24,268	0/0:49,0:41:75.22:0,75,1096	0/0:73,0:28:57.05:0,57,727	0/0:17,0:8:18.05:0,18,242	0/0:56,0:46:75.47:0,75,1048	0/0:37,0:29:54.16:0,54,778	0/0:48,0:28:66.07:0,66,873	0/0:49,0:32:75.11:0,75,995	0/0:52,0:43:87.26:0,87,1255	0/0:60,0:52:92.83:0,93,1250	0/0:44,0:33:18.83:0,19,569	0/0:51,0:20:3.04:0,3,234	0/0:21,0:10:18.03:0,18,235	0/0:197,0:100:99:0,119,1801	0/0:28,0:10:18.06:0,18,272	0/0:22,0:7:15.05:0,15,231	0/0:87,0:74:99:0,132,1823	0/0:30,0:18:36.08:0,36,493	0/1:39,6:21:99:152,0,107	0/0:18,0:15:21.05:0,21,302	1/1:6,2:2:3.01:56,3,0
chr10	37723229	.	T	TCAC	313.39	PASS	AB=0.903;AC=3;AF=0.054;AN=56;BaseQRankSum=5.206;DP=1340;FS=0.000;HRun=0;HaplotypeScore=177.5529;InbreedingCoeff=0.5180;MQ=44.74;MQ0=167;MQRankSum=-0.888;QD=8.04;ReadPosRankSum=-1.630;VQSLOD=2.5908;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:66,0:46:93.24:0,93,1346	0/0:13,0:8:11.52:0,12,183	0/0:24,0:6:18.06:0,18,271	0/0:23,0:7:20.27:0,20,250	0/0:16,0:10:18.03:0,18,253	0/0:40,0:25:69.20:0,69,1020	0/0:96,0:66:99:0,141,2116	0/0:76,0:47:99:0,118,1593	0/0:48,0:40:98.56:0,99,1457	0/0:63,0:32:71.97:0,72,1005	0/0:19,0:12:27.09:0,27,417	0/0:40,0:31:37.12:0,37,494	0/0:46,0:40:89.55:0,90,1336	0/0:48,0:38:89.43:0,89,1322	0/0:61,0:49:99:0,122,1772	0/0:55,0:48:99:0,99,1431	0/0:57,1:53:99:0,102,1512	0/0:39,0:38:89:0,89,1260	0/0:63,0:27:54.14:0,54,762	0/0:32,0:20:38.58:0,39,546	0/0:185,0:131:99:0,263,3946	0/0:35,0:22:42.11:0,42,636	0/0:19,0:17:1.98:0,2,181	0/0:72,0:60:78.75:0,79,812	0/0:38,0:24:54.02:0,54,755	0/1:25,3:14:99:156,0,150	0/0:21,0:21:48.15:0,48,705	1/1:4,7:9:12.04:257,12,0
chr10	37723974	.	AG	A	1939.55	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.208;DP=736;FS=2.493;HRun=1;HaplotypeScore=75.3510;InbreedingCoeff=0.9959;MQ=76.45;MQ0=1;MQRankSum=-1.177;QD=37.30;ReadPosRankSum=0.622;VQSLOD=4.1545;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,154,2437	0/0:6,0:6:18.06:0,18,286	0/0:29,0:25:71.14:0,71,837	0/0:31,0:29:60.68:0,61,955	0/0:32,0:32:96.32:0,96,1498	0/0:26,0:26:78.25:0,78,1219	0/0:24,0:24:72.18:0,72,1115	0/0:31,0:31:93.28:0,93,1402	0/0:29,0:29:87.27:0,87,1334	0/0:21,0:21:63.21:0,63,987	0/0:16,0:16:48.14:0,48,708	0/0:23,0:23:66.23:0,66,1051	0/0:26,0:26:78.26:0,78,1219	0/0:28,0:28:84.29:0,84,1323	0/0:22,0:22:66.22:0,66,1040	0/0:20,0:20:60.19:0,60,933	0/0:36,0:36:99:0,108,1725	0/0:31,0:31:93.27:0,93,1432	0/0:21,0:21:63.19:0,63,947	0/0:22,0:21:60.18:0,60,911	0/0:36,0:36:99:0,108,1650	0/0:23,0:22:66.22:0,66,1050	0/0:17,0:17:48.15:0,48,744	0/0:33,0:33:99:0,99,1522	0/0:16,0:16:48.15:0,48,737	1/1:0,35:35:99:1432,105,0	0/0:34,0:34:99:0,102,1594	1/1:0,17:17:45.15:629,45,0
chr10	37724183	.	CA	C	8766.23	PASS	AB=0.625;AC=43;AF=0.768;AN=56;BaseQRankSum=4.711;DP=586;FS=0.000;HRun=10;HaplotypeScore=68.0439;InbreedingCoeff=0.9417;MQ=74.61;MQ0=5;MQRankSum=-0.454;QD=19.83;ReadPosRankSum=1.966;VQSLOD=5.7148;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,33:37:86.96:754,87,0	1/1:0,6:6:18:156,18,0	0/0:26,0:15:19.53:0,20,186	0/0:27,0:19:24.23:0,24,239	0/0:25,0:26:68.55:0,69,737	1/1:2,16:18:41.99:365,42,0	1/1:4,19:23:47.99:417,48,0	1/1:4,15:20:46.97:386,47,0	0/0:17,0:18:21.89:0,22,435	1/1:3,16:19:44.97:391,45,0	1/1:4,17:21:47.99:417,48,0	1/1:1,14:15:32.96:286,33,0	1/1:0,19:19:50.86:443,51,0	1/1:1,13:14:35.99:313,36,0	1/1:0,22:22:47.99:417,48,0	0/0:19,0:19:51.12:0,51,555	0/0:26,0:26:66.15:0,66,717	1/1:5,16:21:41.98:365,42,0	1/1:3,17:20:50.97:440,51,0	0/1:8,12:20:0.23:227,0,0	1/1:5,20:25:50.98:443,51,0	1/1:3,21:25:51.63:533,52,0	1/1:2,9:11:17.91:156,18,0	1/1:3,18:21:46.83:415,47,0	1/1:2,19:21:50.99:443,51,0	1/1:3,23:26:47.51:570,48,0	1/1:4,16:20:44.98:391,45,0	1/1:0,18:18:50.99:443,51,0
chr10	37724359	.	G	GCACACACACACACACA	4072.83	PASS	AB=0.567;AC=37;AF=0.804;AN=46;BaseQRankSum=-1.821;DP=357;FS=13.074;HRun=0;HaplotypeScore=141.6153;InbreedingCoeff=0.5898;MQ=53.80;MQ0=4;MQRankSum=-2.657;QD=16.42;ReadPosRankSum=-4.349;VQSLOD=-0.0137;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:26:18.02:410,18,0	1/1:4,0:4:3.01:110,3,0	./.	./.	0/0:16,0:18:33.08:0,33,1019	1/1:14,0:13:8.93:227,9,0	1/1:18,0:16:8.27:198,8,0	1/1:9,0:9:21.07:528,21,0	0/0:9,0:9:14.62:0,15,518	1/1:1,0:15:6.48:193,6,0	0/1:4,0:17:0:0,0,0	./.	1/1:10,4:15:12.04:323,12,0	1/1:5,0:5:3.01:49,3,0	1/1:6,0:6:3.01:118,3,0	0/0:7,0:8:15.05:0,15,362	0/0:25,0:26:49.37:0,49,1738	1/1:13,0:12:9:177,9,0	1/1:11,0:12:15.02:446,15,0	1/1:12,0:10:2.95:73,3,0	1/1:14,0:14:6.02:87,6,0	./.	./.	1/1:17,0:16:2.31:45,2,0	1/1:6,2:12:3.48:166,3,0	1/1:6,0:16:30.07:605,30,0	1/1:5,2:10:3.01:226,3,0	1/1:9,0:9:11.95:92,12,0
chr10	37725711	.	TCTCC	T	371.14	PASS	AB=1.000;AC=22;AF=0.423;AN=52;BaseQRankSum=-0.018;DP=409;FS=0.000;HRun=0;HaplotypeScore=83.8548;InbreedingCoeff=0.2324;MQ=33.40;MQ0=78;MQRankSum=0.933;QD=1.53;ReadPosRankSum=3.231;VQSLOD=1.3628;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:7:0.47:0,0,2	0/0:6,0:5:3.27:0,3,13	./.	./.	1/1:14,0:14:3:22,3,0	0/0:17,0:10:2.02:0,2,4	0/0:10,0:7:6.49:0,6,66	1/1:30,0:28:4.46:15,4,0	0/0:12,5:14:1.35:0,1,3	0/1:6,0:3:0.02:0,0,0	0/0:6,0:4:0:0,0,0	1/1:12,0:11:0.76:3,1,0	1/1:8,0:6:1.96:27,2,0	0/1:20,0:18:9.14:9,0,15	0/0:9,0:6:5.72:0,6,20	1/1:15,1:14:7.57:115,8,0	0/1:26,0:21:29.75:114,0,30	0/0:17,0:12:4.32:0,4,9	0/1:19,0:14:16.36:16,0,35	0/0:12,0:10:1.15:0,1,3	0/0:24,0:16:0.74:0,1,1	1/1:16,0:12:1.92:22,2,0	0/0:15,0:14:5.97:0,6,57	0/1:20,0:17:0.22:0,0,0	0/0:18,0:15:0.48:0,0,2	0/1:19,0:16:5.94:50,0,6	1/1:17,0:13:10.70:60,11,0	1/1:19,0:14:5.80:44,6,0
chr10	37725715	.	CCTCTCCCTCTCCCTCTCCCTCT	C	282.72	PASS	AB=0.972;AC=11;AF=0.212;AN=52;BaseQRankSum=1.309;DP=404;FS=0.771;HRun=0;HaplotypeScore=155.2812;InbreedingCoeff=-0.0756;MQ=33.10;MQ0=81;MQRankSum=0.774;QD=1.41;ReadPosRankSum=0.847;VQSLOD=2.8446;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:14,0:9:2.31:2,0,7	0/0:5,0:4:6.42:0,6,64	./.	./.	0/1:13,0:13:0.64:1,0,1	0/0:16,0:9:15.35:0,15,125	0/0:12,0:9:9.51:0,10,72	0/1:32,0:27:99:116,0,150	0/1:18,0:15:2.10:2,0,8	0/0:6,0:3:6.54:0,7,34	0/1:6,0:4:0:0,0,0	0/0:12,0:11:7.79:0,8,28	0/0:9,0:7:1.31:0,1,6	0/0:20,0:18:10.36:0,10,153	0/0:9,0:6:8.62:0,9,52	0/1:17,0:15:26.26:26,0,74	0/1:25,0:20:62.18:62,0,161	0/0:18,0:13:7.75:0,8,91	0/1:21,0:15:99:102,0,369	0/1:6,5:9:42.19:42,0,92	0/1:27,0:19:5.95:6,0,18	0/0:15,0:11:6.60:0,7,20	0/0:13,0:12:6.94:0,7,51	0/0:20,0:17:0.94:0,1,2	0/0:17,0:14:9.12:0,9,111	0/0:19,0:16:34:0,34,269	0/1:16,0:12:9.78:41,0,10	0/0:13,0:8:11.65:0,12,72
chr10	37725943	.	C	CA	334.67	PASS	AB=0.808;AC=7;AF=0.125;AN=56;BaseQRankSum=-2.162;DP=509;FS=0.720;HRun=11;HaplotypeScore=65.2470;InbreedingCoeff=0.0987;MQ=72.33;MQ0=0;MQRankSum=1.182;QD=3.28;ReadPosRankSum=-2.352;VQSLOD=-0.7362;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:19:46.79:0,47,346	0/0:8,0:10:22.95:0,23,168	0/0:15,0:16:3.52:0,4,66	0/0:14,0:12:2.01:0,2,66	0/0:22,0:22:53.75:0,54,415	0/0:20,1:22:22.41:0,22,345	0/0:9,0:9:14.85:0,15,106	0/1:32,3:36:20.82:21,0,379	0/0:20,0:21:55.81:0,56,421	0/0:27,0:27:58.93:0,59,445	0/0:12,0:13:22.91:0,23,168	1/1:2,7:9:14.86:136,15,0	0/0:15,0:17:33.84:0,34,232	0/1:13,1:14:6.59:7,0,139	0/0:16,0:18:42.88:0,43,309	0/0:19,1:20:26.31:0,26,385	0/0:36,0:39:89.52:0,90,655	0/0:20,0:22:48.84:0,49,355	0/0:16,0:17:4.29:0,4,203	0/0:13,1:15:1.44:0,1,180	0/0:14,0:14:35.65:0,36,266	0/0:16,0:18:36.92:0,37,267	0/1:6,10:16:41.41:157,0,41	0/1:4,7:12:69.67:123,0,70	0/1:14,1:14:19.80:20,0,194	0/0:24,0:28:65.87:0,66,482	0/0:15,0:17:21.54:0,22,266	0/0:8,0:8:8.96:0,9,70
chr10	37730941	.	T	TTTTA	5233.59	PASS	AB=1.000;AC=35;AF=0.729;AN=48;BaseQRankSum=0.795;DP=323;FS=0.649;HRun=0;HaplotypeScore=70.6082;InbreedingCoeff=0.6798;MQ=57.49;MQ0=0;MQRankSum=-3.943;QD=23.57;ReadPosRankSum=-0.007;VQSLOD=4.3210;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:16:18.05:215,18,0	1/1:4,2:6:12.04:243,12,0	0/0:6,0:4:5.99:0,6,68	./.	0/0:21,0:21:36.12:0,36,572	1/1:6,8:14:21.07:502,21,0	./.	1/1:25,2:26:24.08:514,24,0	0/0:9,0:9:2.99:0,3,24	1/1:7,4:10:18.06:415,18,0	1/1:4,1:5:3.01:72,3,0	./.	1/1:8,2:10:6.02:144,6,0	1/1:6,1:7:6.02:143,6,0	1/1:8,4:12:15.05:344,15,0	0/0:12,0:12:15.04:0,15,217	0/0:21,0:21:45.13:0,45,694	1/1:10,6:16:27.09:632,27,0	1/1:12,4:16:21.07:500,21,0	1/1:10,5:15:15.05:359,15,0	1/1:3,1:4:3.01:72,3,0	1/1:4,1:5:3.01:72,3,0	1/1:5,0:6:9.03:171,9,0	./.	1/1:7,7:14:24.08:541,24,0	0/1:12,0:27:7.24:7,0,375	1/1:6,4:10:12.04:287,12,0	0/0:9,0:13:12.01:0,12,112
chr10	37730978	.	CT	C	4121.37	PASS	AB=0.846;AC=43;AF=0.768;AN=56;BaseQRankSum=8.218;DP=310;FS=0.619;HRun=10;HaplotypeScore=57.3345;InbreedingCoeff=0.7200;MQ=44.06;MQ0=14;MQRankSum=-5.373;QD=18.40;ReadPosRankSum=-1.965;VQSLOD=3.6548;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,7:10:20.99:182,21,0	1/1:0,5:5:15:130,15,0	0/0:12,0:3:2.22:0,2,7	0/0:16,2:2:5.68:0,6,41	0/0:21,1:21:31.07:0,31,554	1/1:3,4:7:11.98:103,12,0	1/1:0,1:2:5.04:32,5,0	1/1:13,22:31:59.91:517,60,0	0/0:3,0:3:9.02:0,9,100	1/1:3,9:12:26.99:234,27,0	1/1:2,8:10:26.98:234,27,0	1/1:1,4:5:15:130,15,0	1/1:1,4:5:12:104,12,0	1/1:1,6:6:14.99:130,15,0	1/1:1,4:5:11.99:104,12,0	0/1:9,2:11:19.02:19,0,266	0/0:18,0:18:42.07:0,42,444	1/1:4,10:14:26.98:234,27,0	1/1:2,15:16:41.97:359,42,0	1/1:1,6:7:11.98:104,12,0	0/0:2,1:3:3.01:0,3,33	1/1:1,5:6:14.99:129,15,0	1/1:2,4:5:11.98:103,12,0	1/1:0,5:5:12:104,12,0	1/1:4,7:12:23.03:187,23,0	1/1:4,20:23:59.97:517,60,0	1/1:1,10:11:32.98:283,33,0	1/1:1,7:8:21:182,21,0
chr10	37731036	.	TG	T	6111.10	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=3.506;DP=433;FS=5.215;HRun=2;HaplotypeScore=80.1881;InbreedingCoeff=0.9763;MQ=75.06;MQ0=8;MQRankSum=-4.379;QD=21.67;ReadPosRankSum=2.397;VQSLOD=4.8616;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:19,1:20:47.92:408,48,0	1/1:7,0:7:17.98:151,18,0	0/0:46,1:19:23.58:0,24,230	0/0:41,2:24:23.60:0,24,275	0/0:20,0:20:58.72:0,59,682	1/1:6,0:6:11.99:103,12,0	1/1:11,1:12:19.25:193,19,0	1/1:23,6:30:75.03:683,75,0	0/0:7,0:7:20.78:0,21,254	1/1:11,6:17:47.95:432,48,0	1/1:13,1:14:41.58:327,42,0	1/1:8,5:13:38.99:347,39,0	1/1:6,1:7:20.96:181,21,0	1/1:10,0:11:32.69:250,33,0	1/1:8,1:9:21.01:194,21,0	0/0:17,0:17:51.03:0,51,624	0/0:17,0:17:46.33:0,46,489	1/1:12,2:14:29.96:273,30,0	1/1:9,0:9:26.03:215,26,0	1/1:6,0:6:17.92:144,18,0	1/1:8,0:8:12:104,12,0	1/1:7,0:7:20.98:175,21,0	1/1:11,2:12:32.99:305,33,0	1/1:15,1:16:29.98:267,30,0	1/1:12,2:13:38.98:345,39,0	1/1:17,1:18:43.27:383,43,0	1/1:19,5:23:59.92:503,60,0	1/1:7,0:7:17.45:130,17,0
chr10	37731037	.	GGT	G	9019.05	PASS	AB=0.600;AC=43;AF=0.768;AN=56;BaseQRankSum=1.102;DP=433;FS=4.916;HRun=0;HaplotypeScore=75.4133;InbreedingCoeff=0.8906;MQ=74.30;MQ0=7;MQRankSum=-1.248;QD=31.98;ReadPosRankSum=3.509;VQSLOD=6.7220;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,15:20:48.08:678,48,0	1/1:2,4:6:18.04:241,18,0	0/0:45,0:18:28:0,28,285	0/0:42,0:24:31.02:0,31,392	0/0:20,0:20:59.90:0,60,893	1/1:0,6:6:12.04:185,12,0	0/1:4,8:12:5.07:244,0,5	1/1:19,11:31:54.22:889,54,0	0/0:7,0:7:20.78:0,21,331	1/1:7,8:17:47.21:567,47,0	1/1:3,10:14:41.79:536,42,0	1/1:8,5:13:34.97:495,35,0	1/1:3,4:7:21:260,21,0	1/1:3,8:11:32.80:414,33,0	1/1:2,7:9:20.42:269,20,0	0/0:18,0:18:54.15:0,54,904	0/0:18,0:18:49.34:0,49,704	1/1:4,10:14:29.20:340,29,0	1/1:9,1:11:8.60:321,9,0	1/1:1,5:6:17.98:226,18,0	1/1:0,8:8:12.04:187,12,0	1/1:4,3:7:17.79:246,18,0	1/1:5,4:11:32.28:389,32,0	1/1:3,12:16:29.75:388,30,0	1/1:3,11:13:38.49:543,38,0	1/1:7,9:17:42.10:549,42,0	1/1:6,18:24:47.14:820,47,0	1/1:3,4:7:18.01:232,18,0
chr10	37731636	.	AG	A	1616.15	PASS	AB=0.968;AC=40;AF=0.714;AN=56;BaseQRankSum=4.430;DP=476;FS=0.000;HRun=1;HaplotypeScore=96.9230;InbreedingCoeff=0.0358;MQ=44.34;MQ0=20;MQRankSum=-4.032;QD=3.98;ReadPosRankSum=3.755;VQSLOD=0.2979;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:25,2:24:19.36:179,19,0	1/1:7,0:7:13.32:53,13,0	0/1:36,3:9:2.47:2,0,86	0/0:53,3:11:0.15:0,0,20	0/1:13,0:12:22.83:23,0,146	1/1:12,1:12:11.67:121,12,0	1/1:16,0:14:27.68:97,28,0	0/1:19,1:17:22.46:22,0,33	0/0:7,0:6:5.67:0,6,105	0/1:23,1:23:31.47:65,0,31	1/1:19,0:18:9.92:67,10,0	1/1:11,1:12:19.22:86,19,0	1/1:11,0:8:16.49:95,16,0	1/1:12,2:13:5.99:123,6,0	1/1:12,0:12:10.99:57,11,0	0/1:8,0:7:5.81:6,0,22	0/1:21,1:20:26.50:26,0,302	1/1:18,0:14:20.53:66,21,0	0/1:13,0:10:31.07:31,0,31	0/1:15,0:14:28.40:52,0,28	1/1:5,0:3:4.44:13,4,0	1/1:10,2:12:7.57:135,8,0	0/1:14,1:14:13.62:47,0,14	1/1:20,1:19:8.70:83,9,0	1/1:14,0:13:10.78:70,11,0	0/1:15,1:16:8.62:71,0,9	1/1:18,0:18:37.65:187,38,0	0/0:5,0:4:5.67:0,6,40
chr10	37731637	.	GA	G	5187.33	PASS	AB=0.892;AC=43;AF=0.768;AN=56;BaseQRankSum=-0.114;DP=484;FS=7.843;HRun=11;HaplotypeScore=85.4302;InbreedingCoeff=0.6733;MQ=46.88;MQ0=21;MQRankSum=-2.285;QD=13.34;ReadPosRankSum=2.758;VQSLOD=4.7534;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:14,12:24:47.91:393,48,0	1/1:2,5:7:17.97:146,18,0	0/0:44,0:10:16.15:0,16,116	0/1:60,1:12:7.98:8,0,81	0/0:13,0:12:15.31:0,15,138	1/1:4,9:12:30.36:238,30,0	1/1:4,12:14:38.93:319,39,0	1/1:10,9:17:31.35:250,31,0	0/0:6,0:6:14.51:0,15,119	1/1:10,14:23:59.85:482,60,0	1/1:5,11:15:30.09:272,30,0	1/1:7,6:13:29.95:244,30,0	1/1:7,4:8:18.83:127,19,0	1/1:9,5:13:26.62:203,27,0	1/1:4,8:12:26.96:221,27,0	0/0:8,0:7:2.51:0,3,49	0/0:23,0:20:12.20:0,12,307	1/1:7,11:14:38.94:318,39,0	0/1:8,4:10:9.93:139,0,10	1/1:10,5:14:20.16:161,20,0	1/1:1,4:3:5.98:49,6,0	1/1:7,5:12:29.90:235,30,0	1/1:9,6:14:23.96:196,24,0	1/1:11,10:19:29.88:238,30,0	1/1:5,9:13:25.76:197,26,0	1/1:5,10:16:43.88:340,44,0	1/1:6,12:18:46.62:369,47,0	0/1:5,0:4:2.32:40,0,2
chr10	37731648	.	AG	A	1465.28	PASS	AB=0.946;AC=31;AF=0.554;AN=56;BaseQRankSum=7.279;DP=496;FS=6.183;HRun=1;HaplotypeScore=102.6868;InbreedingCoeff=-0.1265;MQ=60.22;MQ0=15;MQRankSum=-8.754;QD=3.39;ReadPosRankSum=6.826;VQSLOD=0.1368;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:23:27.75:140,28,0	0/1:6,1:7:2.23:43,0,2	0/1:65,1:22:24.93:25,0,128	0/1:72,0:15:17.56:18,0,122	0/0:12,0:11:16.13:0,16,220	1/1:12,0:12:1.34:56,1,0	0/1:17,0:16:31.37:61,0,31	0/0:18,0:17:4.14:0,4,80	0/0:7,0:6:6.79:0,7,107	0/1:23,1:24:67.77:68,0,98	0/1:16,1:17:26.08:85,0,26	1/1:10,2:12:12.21:84,12,0	0/1:9,1:9:13.98:75,0,14	1/1:9,2:10:26.82:153,27,0	0/1:9,1:10:5.95:47,0,6	0/1:6,0:5:27.73:28,0,53	0/0:24,0:21:14.91:0,15,365	1/1:16,1:14:5.81:94,6,0	0/1:10,2:10:15.19:65,0,15	1/1:12,0:12:19.50:126,20,0	0/1:6,0:4:2.11:2,0,31	0/1:11,2:13:19.96:76,0,20	0/1:12,1:13:27.96:44,0,28	0/1:20,1:20:21.11:68,0,21	0/1:14,0:14:15.26:15,0,47	1/1:15,1:16:14.28:90,14,0	1/1:17,1:18:36.82:170,37,0	0/0:3,0:3:1.25:0,1,3
chr10	37731662	.	AGG	A	4060.14	PASS	AB=0.716;AC=31;AF=0.554;AN=56;BaseQRankSum=-3.013;DP=484;FS=1.217;HRun=11;HaplotypeScore=98.9617;InbreedingCoeff=0.6714;MQ=65.23;MQ0=14;MQRankSum=-2.151;QD=16.64;ReadPosRankSum=2.396;VQSLOD=2.7696;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:9,1:22:18.86:19,0,22	1/1:4,4:8:9:96,9,0	0/0:63,0:22:9.87:0,10,181	0/0:67,0:15:9.56:0,10,92	0/0:9,0:10:9.03:0,9,134	1/1:3,9:12:24.06:255,24,0	1/1:3,10:11:21.05:224,21,0	1/1:10,13:20:36.05:367,36,0	0/0:4,0:4:3.01:0,3,45	1/1:4,20:24:54.11:573,54,0	1/1:6,12:18:27:274,27,0	0/0:7,0:11:4.87:0,5,16	1/1:3,7:10:14.82:156,15,0	1/1:5,8:14:22.84:228,23,0	1/1:0,9:9:21.05:223,21,0	0/0:6,0:6:15.05:0,15,228	0/0:22,0:21:33.08:0,33,464	1/1:7,10:16:24.05:255,24,0	0/1:7,4:10:51.69:81,0,52	0/1:8,2:11:17.53:112,0,18	1/1:4,4:7:8.21:94,8,0	1/1:0,12:12:27.07:287,27,0	0/0:4,0:13:15.47:0,15,68	0/0:5,0:21:22.21:0,22,77	1/1:4,10:14:33.08:351,33,0	0/0:9,0:16:12.35:0,12,41	1/1:5,11:18:45.08:464,45,0	0/0:0,0:4:4.99:0,5,17
chr10	37731847	.	TGA	T	527.08	PASS	AB=0.960;AC=29;AF=0.558;AN=52;BaseQRankSum=4.970;DP=443;FS=0.000;HRun=0;HaplotypeScore=92.5991;InbreedingCoeff=0.1836;MQ=57.88;MQ0=8;MQRankSum=-0.916;QD=1.86;ReadPosRankSum=-1.860;VQSLOD=1.6266;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:33,1:34:56.96:57,0,683	1/1:7,0:7:5.42:23,5,0	./.	0/0:25,0:9:1.59:0,2,25	0/1:14,7:21:21.66:22,0,312	0/0:26,0:25:29.92:0,30,292	1/1:11,0:11:11.58:75,12,0	1/1:22,0:22:0.35:1,0,0	0/1:13,0:13:30.49:30,0,244	1/1:9,0:8:4.95:23,5,0	0/1:14,0:14:13.03:47,0,13	0/1:13,0:14:12.39:12,0,23	1/1:17,0:17:8.64:36,9,0	1/1:12,0:12:10.78:45,11,0	0/0:18,0:17:17.39:0,17,230	0/0:15,0:14:1.53:0,2,461	0/1:21,2:23:18.47:18,0,600	1/1:18,0:18:24.91:110,25,0	0/1:10,0:10:13.64:17,0,14	1/1:12,0:12:8.40:44,8,0	0/1:9,0:8:1.08:1,0,19	0/1:10,0:10:5.45:5,0,19	0/0:12,0:12:5.69:0,6,36	./.	1/1:11,0:10:8.40:41,8,0	0/0:15,0:34:33.09:0,33,300	1/1:17,0:17:20.55:85,21,0	0/0:3,0:6:12.47:0,12,105
chr10	37733786	.	CTTTTTCT	C	4232.90	PASS	AB=0.991;AC=28;AF=0.500;AN=56;BaseQRankSum=-2.779;DP=393;FS=3.356;HRun=0;HaplotypeScore=90.6603;InbreedingCoeff=0.0790;MQ=62.91;MQ0=5;MQRankSum=-0.164;QD=14.16;ReadPosRankSum=-5.966;VQSLOD=1.5557;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:24:3:32,3,0	0/0:2,0:2:5.38:0,5,70	0/0:13,0:8:9.28:0,9,72	0/1:14,0:4:1.80:2,0,2	0/0:14,0:14:36.12:0,36,848	0/1:20,0:20:99:179,0,461	1/1:16,0:16:27.06:290,27,0	1/1:20,0:19:33.08:355,33,0	0/0:11,0:11:27.07:0,27,701	0/1:18,0:18:99:182,0,237	0/1:11,0:11:75.33:164,0,75	1/1:2,6:8:3.01:69,3,0	0/1:11,0:11:95.93:198,0,96	0/1:9,0:9:99:169,0,99	0/1:13,0:13:99:160,0,193	0/0:12,0:12:33.11:0,33,773	0/0:26,0:26:72.24:0,72,1628	0/1:17,0:17:99:210,0,206	0/1:15,0:13:99:154,0,117	0/1:14,0:14:99:188,0,227	1/1:5,0:5:9.02:97,9,0	0/0:6,0:6:9.49:0,9,244	1/1:1,11:12:17.64:307,18,0	1/1:3,8:11:6.02:104,6,0	0/1:19,0:19:99:149,0,389	1/1:1,22:23:63.19:1070,63,0	0/1:17,0:17:99:152,0,309	0/0:9,0:9:17.03:0,17,249
chr10	37734244	.	TC	T	750.72	PASS	AB=0.933;AC=33;AF=0.589;AN=56;BaseQRankSum=-2.595;DP=369;FS=6.680;HRun=14;HaplotypeScore=61.6099;InbreedingCoeff=0.4620;MQ=75.77;MQ0=7;MQRankSum=-2.025;QD=2.98;ReadPosRankSum=0.798;VQSLOD=-0.5052;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:18:15.60:46,16,0	0/0:2,0:2:0:0,0,0	0/0:47,0:21:20.77:0,21,93	0/1:48,3:22:11.58:12,0,89	1/1:15,1:16:4.12:23,4,0	1/1:8,1:9:8.71:51,9,0	0/1:14,2:17:0.94:112,0,1	1/1:7,1:9:6.52:30,7,0	0/0:12,0:12:14.36:0,14,111	0/1:9,0:9:13.71:14,0,21	0/1:7,1:8:0:0,0,0	0/0:11,0:11:21.96:0,22,97	1/1:9,0:9:11.86:80,12,0	0/1:9,0:9:2.26:21,0,2	1/1:7,0:7:7.01:39,7,0	1/1:10,0:9:6.16:33,6,0	1/1:17,4:21:29.30:191,29,0	1/1:17,3:21:23.33:150,23,0	1/1:9,1:11:4.56:26,5,0	1/1:4,0:4:4.77:25,5,0	0/0:8,0:8:2.98:0,3,22	1/1:1,0:2:3.40:19,3,0	0/0:6,0:6:13.72:0,14,62	0/0:18,0:18:30.13:0,30,137	0/0:3,0:3:0:0,0,0	0/0:9,0:9:0:0,0,0	1/1:9,0:9:8.84:38,9,0	1/1:8,0:8:1.78:5,2,0
chr10	37734252	.	C	CCG	1030.27	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-4.963;DP=353;FS=13.123;HRun=0;HaplotypeScore=72.7555;InbreedingCoeff=0.8668;MQ=72.06;MQ0=6;MQRankSum=2.427;QD=27.11;ReadPosRankSum=4.520;VQSLOD=4.3029;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:20:44.89:0,45,365	0/0:3,0:3:8.97:0,9,71	0/0:42,0:20:27.95:0,28,278	0/0:47,0:18:10.97:0,11,213	0/0:11,0:11:23.98:0,24,203	0/0:7,0:7:18.01:0,18,166	0/0:16,0:16:45:0,45,406	0/0:11,0:10:20.90:0,21,167	0/0:11,0:11:32.95:0,33,332	0/0:9,0:9:21:0,21,198	0/0:8,0:8:15:0,15,132	1/1:4,7:12:26.78:392,27,0	0/0:7,0:7:15.01:0,15,133	0/0:8,0:8:15.01:0,15,147	0/0:7,0:7:21:0,21,188	0/0:7,0:6:17.98:0,18,159	0/0:24,0:24:62.73:0,63,536	0/0:20,0:19:50.89:0,51,433	0/0:13,0:13:23.94:0,24,194	0/0:6,0:6:17.03:0,17,134	0/0:6,0:6:9:0,9,79	0/0:3,0:3:8.87:0,9,65	1/1:0,5:7:15.05:237,15,0	1/1:2,15:19:35.81:540,36,0	0/0:6,0:6:11.98:0,12,99	0/0:9,0:9:18:0,18,158	0/0:7,0:7:14.99:0,15,128	0/0:4,0:4:11.96:0,12,95
chr10	37734321	.	CT	C	3601.80	PASS	AB=0.944;AC=45;AF=0.804;AN=56;BaseQRankSum=-5.318;DP=338;FS=11.832;HRun=12;HaplotypeScore=47.3846;InbreedingCoeff=0.7439;MQ=60.57;MQ0=11;MQRankSum=1.127;QD=13.54;ReadPosRankSum=-0.923;VQSLOD=2.2848;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:36,0:36:24.58:281,25,0	1/1:0,3:3:8.97:70,9,0	0/0:13,0:2:3:0,3,28	0/1:16,1:5:5.12:20,0,5	0/0:5,0:18:45.91:0,46,263	1/1:0,11:11:32.87:255,33,0	1/1:3,10:14:25.93:192,26,0	1/1:6,17:20:44.80:348,45,0	0/0:0,0:4:5.68:0,6,29	1/1:0,5:5:14.94:116,15,0	1/1:1,9:10:23.80:176,24,0	1/1:2,6:8:17.92:139,18,0	1/1:4,5:9:15.83:118,16,0	1/1:1,2:3:5.98:46,6,0	1/1:3,5:8:14.22:115,14,0	0/0:1,0:9:19.89:0,20,100	0/0:5,0:27:68.45:0,68,363	1/1:2,7:8:17.93:139,18,0	1/1:2,11:11:32.87:255,33,0	1/1:0,9:10:28.90:210,29,0	1/1:0,7:7:11.95:93,12,0	1/1:2,1:3:2.98:23,3,0	1/1:4,1:5:8.75:68,9,0	1/1:2,9:11:26.87:209,27,0	1/1:1,13:14:29.88:232,30,0	1/1:4,1:22:36.82:120,37,0	1/1:1,14:15:41.79:321,42,0	1/1:1,0:10:18.33:53,18,0
chr10	37734333	.	TA	T	961.26	PASS	AB=1.000;AC=4;AF=0.071;AN=56;BaseQRankSum=-5.021;DP=358;FS=17.513;HRun=3;HaplotypeScore=60.1419;InbreedingCoeff=0.3015;MQ=61.01;MQ0=8;MQRankSum=1.222;QD=16.29;ReadPosRankSum=3.431;VQSLOD=2.2635;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,32:35:87.16:1047,87,0	0/0:4,0:4:5.46:0,5,31	0/0:9,1:1:3:0,3,27	0/1:12,0:6:17.65:18,0,25	0/0:19,0:19:50.07:0,50,382	0/0:13,0:13:19.34:0,19,82	0/0:12,0:12:14.92:0,15,66	0/0:26,0:24:33.74:0,34,227	0/0:7,0:7:14.97:0,15,120	0/0:8,0:8:17.71:0,18,108	0/0:15,0:15:18.89:0,19,159	0/0:7,0:7:10.11:0,10,42	0/0:5,0:5:6.23:0,6,17	0/0:6,0:6:9.18:0,9,76	0/0:6,0:6:9.08:0,9,24	0/0:12,0:12:32.89:0,33,263	0/0:26,0:26:74.77:0,75,609	0/0:11,0:10:9.06:0,9,77	0/0:20,0:17:37.50:0,37,198	0/1:12,0:12:1.52:2,0,66	0/0:11,0:11:17.54:0,18,113	0/0:2,0:2:4.55:0,5,29	0/0:6,0:6:4.12:0,4,48	0/0:9,0:9:9.66:0,10,22	0/0:16,0:16:21.61:0,22,86	0/0:20,0:20:48.17:0,48,305	0/0:17,0:17:20.78:0,21,94	0/0:11,0:11:32.41:0,32,207
chr10	37734828	.	A	AAT	29790.09	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-14.574;DP=920;FS=21.893;HRun=0;HaplotypeScore=106.5891;InbreedingCoeff=0.9853;MQ=62.87;MQ0=10;MQRankSum=1.724;QD=40.42;ReadPosRankSum=0.483;VQSLOD=4.2109;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,43:47:99:1837,108,0	1/1:3,20:23:54.18:913,54,0	0/0:13,0:12:8.13:0,8,110	0/0:21,0:17:24.06:0,24,301	0/0:28,0:28:84.25:0,84,1075	1/1:5,27:32:78.27:1318,78,0	1/1:2,19:21:54.18:926,54,0	1/1:14,30:44:93.30:1561,93,0	0/0:39,0:39:99:0,111,1443	1/1:9,41:51:99:2184,129,0	1/1:7,29:36:84.28:1373,84,0	1/1:8,34:40:90.31:1543,90,0	1/1:4,31:35:93.32:1578,93,0	1/1:3,30:33:72.25:1233,72,0	1/1:0,32:31:75.26:1286,75,0	0/0:53,0:53:99:0,150,1953	0/0:29,0:29:81.25:0,81,1050	1/1:3,16:20:39.13:668,39,0	1/1:3,21:24:66.23:1122,66,0	1/1:0,18:17:42.14:720,42,0	1/1:3,38:41:96.33:1646,96,0	1/1:4,29:33:81.28:1357,81,0	1/1:2,35:38:99:1747,102,0	1/1:5,23:27:56.58:977,57,0	1/1:1,25:25:69.24:1183,69,0	1/1:6,44:51:99:2256,135,0	1/1:4,34:38:96.33:1617,96,0	1/1:5,15:20:45.62:744,46,0
chr10	37735184	.	AAAACAACTC	A	1023.78	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.586;DP=548;FS=2.606;HRun=0;HaplotypeScore=150.7591;InbreedingCoeff=0.9681;MQ=93.08;MQ0=0;MQRankSum=-5.451;QD=73.13;ReadPosRankSum=0.105;VQSLOD=3.4208;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:32:93.32:0,93,4352	0/0:14,0:14:42.13:0,42,1888	0/0:23,0:23:63.69:0,64,2885	0/0:27,0:27:72.21:0,72,3015	0/0:18,0:18:53.21:0,53,2455	0/0:17,0:17:42.14:0,42,2011	0/0:28,0:28:84.27:0,84,3846	0/0:22,0:22:66.23:0,66,2909	0/0:29,0:29:84.29:0,84,4094	0/0:25,0:25:72.25:0,72,3407	0/0:12,0:12:33.11:0,33,1618	0/0:20,0:20:60.19:0,60,2833	0/0:16,0:16:45.15:0,45,2028	0/0:16,0:16:48.16:0,48,2356	0/0:21,0:21:52.06:0,52,2316	0/0:19,0:19:57.20:0,57,2643	0/0:23,0:23:69.21:0,69,3105	0/0:16,0:16:48.14:0,48,2097	0/0:16,0:16:48.16:0,48,2272	0/0:12,0:12:30.10:0,30,1422	0/0:41,0:41:99:0,120,5146	0/0:24,0:24:66.23:0,66,3053	0/0:19,0:19:54.19:0,54,2588	0/0:17,0:16:48.16:0,48,2292	0/0:15,0:15:45.15:0,45,2169	1/1:1,9:10:27.09:853,27,0	0/0:11,0:11:33.11:0,33,1635	1/1:0,4:4:9.03:284,9,0
chr10	37735247	.	T	TTCTCTCTC	6040.14	PASS	AB=0.941;AC=41;AF=0.732;AN=56;BaseQRankSum=3.512;DP=562;FS=34.327;HRun=0;HaplotypeScore=165.5415;InbreedingCoeff=0.5762;MQ=65.86;MQ0=9;MQRankSum=-3.480;QD=14.95;ReadPosRankSum=-2.907;VQSLOD=2.4376;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:22:3.90:73,4,0	1/1:7,3:10:9.03:204,9,0	0/0:34,0:21:3:0,3,76	0/0:44,0:23:26.72:0,27,474	0/0:24,0:24:36.12:0,36,866	1/1:10,0:17:10.26:147,10,0	0/1:19,0:19:50.42:293,0,50	1/1:21,0:21:27.49:370,27,0	0/0:22,0:22:33.11:0,33,732	1/1:15,7:22:4.68:716,5,0	1/1:14,7:21:2.29:5,2,0	1/1:13,0:16:1.36:3,1,0	1/1:9,0:9:5.97:131,6,0	1/1:8,0:13:3.90:111,4,0	1/1:14,10:25:0.82:1,1,0	0/0:17,0:17:30.08:0,30,655	0/0:17,0:16:36.04:0,36,771	1/1:14,0:14:25.33:568,25,0	1/1:16,0:16:18.06:458,18,0	1/1:15,0:16:15.42:278,15,0	0/1:22,5:27:23.80:121,0,24	1/1:25,0:24:21.54:538,22,0	1/1:19,1:19:6.49:100,6,0	0/1:16,0:12:0:0,0,0	1/1:23,0:23:18.53:465,19,0	1/1:19,0:18:27.09:767,27,0	1/1:15,0:16:21.21:492,21,0	1/1:9,1:10:7.84:197,8,0
chr10	37735441	.	T	TACAAAGTTG	39641.35	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-2.418;DP=591;FS=10.187;HRun=0;HaplotypeScore=147.8874;InbreedingCoeff=0.9860;MQ=78.23;MQ0=0;MQRankSum=-15.305;QD=88.68;ReadPosRankSum=-1.015;VQSLOD=4.7330;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:15,18:36:72.25:3275,72,0	1/1:3,6:9:14.79:626,15,0	0/0:27,0:27:66.23:0,66,1798	0/0:23,0:23:47.94:0,48,1038	0/0:15,0:15:39.12:0,39,1026	1/1:11,13:25:42.14:1691,42,0	1/1:11,19:32:63.22:2838,63,0	1/1:26,14:41:99:3998,102,0	0/0:25,0:25:72.25:0,72,2058	1/1:13,9:25:57.20:2286,57,0	1/1:8,7:15:36.12:1405,36,0	1/1:6,12:18:27.09:1273,27,0	1/1:4,10:16:45.15:2035,45,0	1/1:4,3:7:12.04:525,12,0	1/1:16,12:31:66.23:2650,66,0	0/0:22,0:22:57.18:0,57,1568	0/0:32,0:32:81.26:0,81,2310	1/1:4,4:8:21.07:935,21,0	1/1:10,10:20:57.20:2607,57,0	1/1:9,8:18:36.12:1467,36,0	1/1:16,5:23:48.16:1768,48,0	1/1:10,14:25:54.19:2233,54,0	1/1:10,9:19:41.95:1339,42,0	1/1:7,6:13:33.11:1116,33,0	1/1:11,12:23:42.14:1820,42,0	1/1:5,6:12:30.10:1216,30,0	1/1:6,13:20:39.13:1831,39,0	1/1:4,5:10:15.05:707,15,0
chr10	37736160	.	A	AC	10697.90	PASS	AB=0.761;AC=41;AF=0.732;AN=56;BaseQRankSum=0.236;DP=637;FS=1.634;HRun=8;HaplotypeScore=102.1503;InbreedingCoeff=0.7060;MQ=68.91;MQ0=3;MQRankSum=-6.517;QD=23.01;ReadPosRankSum=-1.879;VQSLOD=3.9662;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,105,933	1/1:1,11:12:36.11:415,36,0	0/1:33,0:24:2.75:3,0,187	0/0:31,0:19:18.24:0,18,131	0/0:28,0:28:74.95:0,75,669	1/1:4,20:25:48.98:751,49,0	1/1:13,19:32:50.63:770,51,0	1/1:23,7:31:50.95:503,51,0	0/0:23,0:23:53.98:0,54,484	1/1:8,10:18:11.64:375,12,0	1/1:12,16:28:63.09:680,63,0	1/1:10,8:18:39.09:431,39,0	0/1:5,10:15:15.79:341,0,16	1/1:8,15:23:26.68:547,27,0	1/1:3,22:25:66.20:760,66,0	0/0:25,0:25:60:0,60,544	0/0:21,0:21:63.03:0,63,576	0/1:7,6:13:22.03:241,0,22	1/1:5,11:16:14.64:404,15,0	1/1:12,18:31:72.42:771,72,0	1/1:13,10:23:39.10:439,39,0	1/1:5,16:21:35.65:636,36,0	1/1:6,14:21:29.61:565,30,0	1/1:4,11:15:5.65:309,6,0	1/1:2,8:10:2.63:284,3,0	1/1:8,18:26:63.14:711,63,0	1/1:10,14:24:57.14:634,57,0	1/1:1,3:4:12.02:128,12,0
chr10	37736198	.	GA	G	11250.18	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=8.693;DP=662;FS=4.035;HRun=8;HaplotypeScore=105.9223;InbreedingCoeff=0.9878;MQ=67.66;MQ0=8;MQRankSum=-5.246;QD=23.24;ReadPosRankSum=1.395;VQSLOD=4.7590;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,39:39:99:1014,105,0	1/1:2,13:15:36.06:348,36,0	0/0:41,0:26:30.10:0,30,522	0/0:43,0:21:39.79:0,40,384	0/0:29,0:29:81.24:0,81,966	1/1:4,20:24:48.06:463,48,0	1/1:2,26:28:63.09:608,63,0	1/1:0,23:23:66.09:632,66,0	0/0:21,0:21:63.18:0,63,748	1/1:1,26:27:78.12:753,78,0	1/1:2,22:24:54.07:521,54,0	1/1:2,16:18:45.07:434,45,0	1/1:1,20:21:54.08:521,54,0	1/1:4,21:25:48.06:463,48,0	1/1:3,22:25:54.08:521,54,0	0/0:16,0:16:45.14:0,45,544	0/0:25,0:25:60.18:0,60,725	1/1:1,17:18:48.07:463,48,0	1/1:4,23:27:69.06:652,69,0	1/1:8,21:29:57.08:550,57,0	1/1:1,11:12:27.01:253,27,0	1/1:0,13:13:33.05:318,33,0	1/1:4,21:25:57.07:545,57,0	1/1:0,16:16:39.06:377,39,0	1/1:2,18:20:54.06:514,54,0	1/1:3,22:25:66.09:633,66,0	1/1:3,23:26:60.09:579,60,0	1/1:1,3:4:9.01:87,9,0
chr10	37736847	.	TA	T	197.53	PASS	AB=0.952;AC=3;AF=0.060;AN=50;BaseQRankSum=-0.322;DP=244;FS=0.000;HRun=8;HaplotypeScore=50.5277;InbreedingCoeff=0.3640;MQ=67.61;MQ0=6;MQRankSum=-0.226;QD=6.37;ReadPosRankSum=1.680;VQSLOD=-0.0656;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,11:11:30.05:290,30,0	0/0:5,0:5:15.04:0,15,177	0/1:17,1:7:1.13:1,0,28	0/0:17,0:9:8.58:0,9,89	0/0:6,0:6:18.06:0,18,217	0/0:13,0:13:33.03:0,33,380	0/0:4,0:4:3.01:0,3,36	0/0:26,0:25:60.17:0,60,711	0/0:2,0:2:6.02:0,6,70	0/0:14,0:14:36.10:0,36,418	0/0:6,0:6:18.06:0,18,217	0/0:2,0:2:6.02:0,6,72	0/0:5,0:5:9.03:0,9,109	./.	0/0:1,0:1:3.01:0,3,36	0/0:4,0:4:9.03:0,9,109	0/0:17,1:18:13.17:0,13,428	0/0:27,0:26:59.68:0,60,710	0/0:22,0:19:57.16:0,57,676	0/0:4,0:4:9.03:0,9,109	./.	./.	0/0:4,0:4:12.02:0,12,133	0/0:4,0:4:9.03:0,9,109	0/0:10,0:10:24.06:0,24,276	0/0:3,0:3:3.01:0,3,36	0/0:7,0:7:21.06:0,21,253	0/0:7,0:7:21.06:0,21,253
chr10	37736871	.	TTA	T	5165.76	PASS	AB=0.938;AC=27;AF=0.540;AN=50;BaseQRankSum=-1.190;DP=244;FS=2.691;HRun=0;HaplotypeScore=46.3581;InbreedingCoeff=0.7933;MQ=67.18;MQ0=2;MQRankSum=0.150;QD=33.54;ReadPosRankSum=1.647;VQSLOD=6.4109;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:11:30.06:0,30,460	1/1:0,8:8:21.03:295,21,0	0/0:25,0:9:17.64:0,18,178	0/1:13,1:9:10.77:11,0,70	0/0:10,0:10:21.05:0,21,298	1/1:0,13:12:33.11:503,33,0	1/1:0,5:5:9.03:137,9,0	1/1:2,19:21:50.12:755,50,0	0/0:1,0:1:3.01:0,3,52	1/1:0,11:11:33.10:485,33,0	1/1:0,6:6:18.06:270,18,0	0/0:3,0:3:8.96:0,9,121	1/1:0,5:5:12.04:181,12,0	./.	./.	0/0:1,0:1:3.01:0,3,52	0/0:14,0:14:42.07:0,42,663	1/1:1,24:25:60.12:916,60,0	1/1:2,19:19:56.76:779,57,0	1/1:0,6:5:12.04:182,12,0	1/1:0,1:1:3.01:46,3,0	./.	0/0:4,0:4:9.01:0,9,126	0/0:3,0:3:9.03:0,9,155	1/1:0,9:9:21.07:317,21,0	0/0:8,0:8:24.08:0,24,396	1/1:1,7:8:23.07:289,23,0	0/0:7,0:7:21.07:0,21,363
chr10	37738841	.	T	TTA	1641.09	PASS	AB=0.774;AC=22;AF=0.579;AN=38;BaseQRankSum=-5.447;DP=150;FS=0.988;HRun=0;HaplotypeScore=35.3462;InbreedingCoeff=0.3005;MQ=62.63;MQ0=2;MQRankSum=2.225;QD=18.03;ReadPosRankSum=-1.023;VQSLOD=3.0468;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:12:18.52:0,19,83	./.	0/1:1,0:1:0:0,0,0	0/0:9,0:6:1.55:0,2,4	./.	1/1:4,5:9:15.05:235,15,0	1/1:0,1:1:3.01:47,3,0	0/1:20,7:28:41.88:636,0,42	./.	1/1:3,2:5:3.01:47,3,0	1/1:1,2:3:6.02:94,6,0	0/0:2,0:3:2.84:0,3,14	1/1:0,1:1:3.01:47,3,0	./.	./.	./.	1/1:4,0:4:2.98:22,3,0	0/1:11,7:18:8.04:349,0,8	1/1:4,3:7:9.03:131,9,0	./.	1/1:4,1:5:3.01:47,3,0	./.	0/0:4,0:8:11.36:0,11,56	./.	0/1:1,0:3:20.34:20,0,29	0/0:4,0:7:11.32:0,11,54	1/1:4,2:6:6.02:94,6,0	0/0:11,0:12:3.31:0,3,15
chr10	37738908	.	ACCTCCTCAAAACG	A	17636.39	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=7.041;DP=245;FS=11.351;HRun=0;HaplotypeScore=108.9232;InbreedingCoeff=0.8407;MQ=77.89;MQ0=0;MQRankSum=-8.443;QD=88.18;ReadPosRankSum=2.498;VQSLOD=4.3842;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,20:27:49.56:1950,50,0	1/1:0,2:2:6.02:240,6,0	0/0:14,0:14:39.13:0,39,1135	0/0:7,0:7:17.74:0,18,568	0/0:5,0:5:15.05:0,15,990	1/1:1,9:10:24.08:929,24,0	1/1:0,8:7:18.06:719,18,0	1/1:8,11:19:33.09:952,33,0	0/0:3,0:3:9.03:0,9,594	1/1:2,10:12:30.10:1057,30,0	1/1:0,13:13:39.13:1385,39,0	1/1:0,6:6:18.06:718,18,0	1/1:0,2:2:3.01:120,3,0	1/1:0,7:7:18.06:719,18,0	1/1:0,8:9:24.08:958,24,0	0/0:8,0:8:24.08:0,24,1583	0/0:8,0:8:24.08:0,24,1499	1/1:2,14:16:39.13:1558,39,0	1/1:2,4:6:12.04:402,12,0	1/1:0,6:6:18.06:552,18,0	1/1:2,4:6:9.03:107,9,0	1/1:0,4:4:12.04:479,12,0	1/1:2,3:5:9.03:359,9,0	1/1:0,1:1:3.01:120,3,0	1/1:0,4:4:12.04:479,12,0	1/1:1,18:17:48.16:1917,48,0	1/1:0,13:13:39.13:1558,39,0	1/1:1,4:5:9.03:359,9,0
chr10	37739069	.	ACTCAGGAC	A	1072.63	PASS	AC=6;AF=0.120;AN=50;BaseQRankSum=6.459;DP=498;FS=24.130;HRun=0;HaplotypeScore=138.0581;InbreedingCoeff=0.9061;MQ=50.51;MQ0=27;MQRankSum=-5.706;QD=21.89;ReadPosRankSum=-1.327;VQSLOD=1.4823;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,132,5229	./.	./.	./.	0/0:9,0:8:21.04:0,21,809	0/0:16,0:16:45.15:0,45,1982	0/0:24,0:21:57.13:0,57,2371	0/0:25,0:19:51.06:0,51,1800	0/0:15,0:15:45.14:0,45,1839	0/0:10,0:9:24.07:0,24,941	0/0:10,0:10:30.10:0,30,1281	1/1:1,24:23:36.12:933,36,0	0/0:7,0:7:21.07:0,21,864	0/0:15,0:15:42.14:0,42,1791	0/0:20,0:20:57.20:0,57,2478	0/0:16,0:16:48.15:0,48,1993	0/0:32,0:32:93.31:0,93,3931	0/0:32,0:32:96.31:0,96,4105	0/0:14,0:13:36.08:0,36,1354	0/0:11,0:10:30.10:0,30,1309	0/0:37,0:37:96.20:0,96,3876	0/0:12,0:12:30.08:0,30,1113	1/1:0,8:8:3.01:85,3,0	1/1:1,15:15:9.19:179,9,0	0/0:9,0:9:27.09:0,27,1194	0/0:24,0:21:63.20:0,63,2543	0/0:15,0:15:45.15:0,45,1830	0/0:14,0:14:42.13:0,42,1752
chr10	37739975	.	GGT	G	1081.72	PASS	AB=0.897;AC=39;AF=0.750;AN=52;BaseQRankSum=5.942;DP=561;FS=3.287;HRun=0;HaplotypeScore=111.5168;InbreedingCoeff=-0.2625;MQ=69.89;MQ0=10;MQRankSum=-1.572;QD=2.22;ReadPosRankSum=1.007;VQSLOD=2.3616;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:30,1:32:45.49:45,0,161	1/1:2,1:4:3.01:33,3,0	./.	./.	0/1:13,2:15:13.09:13,0,184	1/1:11,3:15:2.87:33,3,0	1/1:13,5:18:2.98:33,3,0	0/1:21,0:20:8.25:51,0,8	0/1:27,3:29:29.83:30,0,346	0/1:11,1:13:23.03:23,0,204	0/0:10,0:11:3:0,3,25	1/1:17,0:20:5.68:28,6,0	1/1:8,1:13:8.53:58,9,0	1/1:10,5:18:15.95:131,16,0	1/1:11,0:11:2.99:24,3,0	0/1:9,0:9:12.32:12,0,121	0/1:41,5:46:43.98:44,0,686	1/1:14,0:16:14.67:114,15,0	1/1:15,2:17:8.98:86,9,0	1/1:6,3:9:3.01:33,3,0	1/1:35,19:55:9.02:99,9,0	0/1:9,12:22:35.93:57,0,36	1/1:7,0:9:0.89:2,1,0	1/1:16,0:16:2.84:14,3,0	1/1:9,5:14:6.02:66,6,0	0/1:27,1:28:30.28:30,0,208	0/1:17,4:23:17.68:151,0,18	0/1:10,0:10:11.47:11,0,217
chr10	37740009	.	TGTGTGTGCGCGTGTGTGTCTGTGTCTGTGC	T	3038.17	PASS	AB=1.000;AC=22;AF=0.393;AN=56;BaseQRankSum=4.176;DP=547;FS=34.455;HRun=0;HaplotypeScore=288.1962;InbreedingCoeff=-0.1648;MQ=46.04;MQ0=24;MQRankSum=-3.327;QD=8.76;ReadPosRankSum=-4.431;VQSLOD=0.6358;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:29:99:230,0,768	0/1:5,0:4:32.19:116,0,32	0/0:35,0:9:19.59:0,20,480	0/1:45,0:12:8.41:8,0,275	0/0:14,0:14:39.12:0,39,2004	0/1:12,0:12:40.84:184,0,41	0/0:21,0:21:8.53:0,9,152	0/1:19,0:18:38.12:38,0,376	0/0:30,0:29:69.57:0,70,3919	0/1:18,0:18:99:229,0,674	0/0:8,0:8:9:0,9,98	1/1:4,14:18:5.89:283,6,0	0/1:15,0:15:65.86:379,0,66	0/1:22,0:22:99:207,0,148	1/1:9,0:9:6:166,6,0	0/0:5,0:5:15.05:0,15,884	0/0:46,0:46:99:0,121,8481	0/1:14,0:14:99:252,0,191	0/0:11,0:7:9.50:0,10,130	0/1:8,0:8:54.56:113,0,55	0/1:54,0:52:99:337,0,149	0/0:21,0:21:12.01:0,12,197	1/1:11,0:11:6.02:124,6,0	1/1:10,17:26:3.01:241,3,0	0/0:9,0:9:6.01:0,6,67	0/1:19,0:19:99:177,0,754	0/1:14,0:14:69.33:69,0,248	0/1:8,0:8:52.65:53,0,503
chr10	37740013	.	TGTGCGCGTGTGTGTCTGTGTCTGTGC	T	5387.66	PASS	AB=1.000;AC=37;AF=0.661;AN=56;BaseQRankSum=3.736;DP=521;FS=6.636;HRun=0;HaplotypeScore=240.4515;InbreedingCoeff=0.1673;MQ=45.72;MQ0=20;MQRankSum=-2.996;QD=13.78;ReadPosRankSum=-2.776;VQSLOD=2.7663;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:27:99:573,0,110	1/1:5,0:4:6.02:155,6,0	0/0:35,0:10:22.60:0,23,528	0/1:46,0:13:5.47:5,0,290	0/0:13,0:13:28.91:0,29,1332	1/1:13,0:13:15.04:359,15,0	1/1:20,0:20:3.48:34,3,0	0/1:18,0:18:4.88:118,0,5	0/0:29,0:28:66.13:0,66,2885	0/1:18,0:18:99:389,0,192	0/0:7,0:7:3:0,3,25	1/1:18,0:18:5.81:207,6,0	1/1:15,0:15:24.05:457,24,0	1/1:21,0:21:20.74:439,21,0	1/1:1,8:9:6.02:276,6,0	0/1:5,0:5:9.31:9,0,632	0/0:45,0:46:86.92:0,87,6695	1/1:11,0:11:26.71:554,27,0	1/1:11,0:7:8.66:85,9,0	1/1:7,0:7:6.02:155,6,0	1/1:46,0:44:24.53:540,25,0	0/1:18,0:18:35.93:57,0,36	1/1:10,0:10:3.01:79,3,0	1/1:27,0:26:3.01:193,3,0	1/1:10,0:10:6.02:66,6,0	0/1:16,0:16:99:381,0,199	0/1:12,0:12:17.20:151,0,17	0/1:8,0:8:99:105,0,190
chr10	37740015	.	TGCGCGTGTGTGTCTGTGTCTGTGC	T	4529.99	PASS	AB=1.000;AC=37;AF=0.740;AN=50;BaseQRankSum=1.617;DP=513;FS=20.105;HRun=0;HaplotypeScore=227.8554;InbreedingCoeff=0.5821;MQ=45.68;MQ0=19;MQRankSum=-3.050;QD=12.72;ReadPosRankSum=-4.479;VQSLOD=1.6245;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:28:30.09:685,30,0	1/1:5,0:4:3.01:122,3,0	0/0:34,0:10:22.60:0,23,528	0/1:45,0:13:5.48:5,0,290	0/0:13,0:13:21.07:0,21,1123	1/1:13,0:13:12.03:326,12,0	1/1:19,0:19:0.47:1,0,0	1/1:16,0:16:3.40:71,3,0	0/0:29,0:28:48.12:0,48,2557	1/1:18,0:18:12.04:400,12,0	./.	1/1:18,0:18:3.01:179,3,0	1/1:15,0:15:15.05:398,15,0	1/1:19,0:19:10.48:312,10,0	1/1:8,1:9:6.02:287,6,0	0/0:6,0:6:12.04:0,12,619	0/0:45,0:45:93.29:0,93,5913	1/1:10,0:10:12.04:440,12,0	./.	1/1:7,0:7:3.01:122,3,0	1/1:45,0:44:15.51:441,16,0	0/1:18,0:18:0:0,0,0	1/1:10,0:10:3.01:79,3,0	1/1:27,0:26:3.01:179,3,0	0/1:10,0:10:0:0,0,0	1/1:15,0:15:9.03:360,9,0	./.	1/1:8,0:8:6:121,6,0
chr10	37740033	.	TCTGTGC	T	1940.40	PASS	AB=0.965;AC=23;AF=0.426;AN=54;BaseQRankSum=7.505;DP=486;FS=13.060;HRun=0;HaplotypeScore=140.7399;InbreedingCoeff=-0.2288;MQ=54.33;MQ0=12;MQRankSum=-0.666;QD=7.64;ReadPosRankSum=0.421;VQSLOD=2.0370;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:18.30:0,18,442	0/1:6,0:6:27.65:65,0,28	0/0:45,0:18:46.14:0,46,921	0/0:59,0:26:39.27:0,39,1032	0/0:14,0:14:33.09:0,33,883	0/1:13,0:13:99:145,0,143	0/0:16,0:15:2.58:0,3,58	0/1:14,0:14:99:196,0,241	0/0:22,0:22:63.22:0,63,2102	0/1:3,12:15:99:251,0,137	./.	0/1:18,0:18:19.68:41,0,20	0/1:11,0:12:64.42:199,0,64	0/1:19,0:19:99:121,0,115	1/1:9,0:9:6.02:82,6,0	0/0:6,0:6:18.06:0,18,631	0/0:37,0:37:99:0,111,3533	0/1:8,0:8:50.29:182,0,50	1/1:3,0:2:5.95:46,6,0	0/1:8,0:7:40.73:42,0,41	0/1:39,0:39:99:248,0,275	0/1:12,0:12:46.54:58,0,47	1/1:12,0:12:13.23:111,13,0	1/1:25,0:25:3.01:47,3,0	0/1:12,0:12:39.64:40,0,47	0/1:12,0:12:99:155,0,215	0/1:11,0:11:23.45:23,0,166	0/1:6,0:6:54.88:55,0,102
chr10	37740800	.	C	CTATT	4372.04	PASS	AB=0.640;AC=39;AF=0.813;AN=48;BaseQRankSum=-3.690;DP=302;FS=5.559;HRun=0;HaplotypeScore=46.5622;InbreedingCoeff=0.4542;MQ=63.86;MQ0=3;MQRankSum=-1.956;QD=19.35;ReadPosRankSum=-0.611;VQSLOD=3.4738;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,1:18:24.08:394,24,0	1/1:1,1:2:3.01:71,3,0	./.	./.	0/0:20,0:20:24.08:0,24,371	1/1:4,9:12:15.05:354,15,0	1/1:6,2:9:6.02:142,6,0	1/1:34,0:31:15:258,15,0	0/0:6,0:6:3.01:0,3,47	1/1:9,4:13:12.04:284,12,0	./.	1/1:5,3:8:9.03:213,9,0	1/1:7,3:10:12.04:275,12,0	1/1:3,2:5:6.02:142,6,0	1/1:10,7:17:18.06:426,18,0	0/0:8,0:8:6.02:0,6,94	0/0:24,0:24:54.18:0,54,844	0/1:7,9:16:63.78:538,0,64	1/1:14,0:13:3.01:52,3,0	1/1:6,1:7:3.01:71,3,0	1/1:2,3:6:3.01:71,3,0	./.	1/1:4,2:6:6.02:142,6,0	1/1:6,0:6:3.01:71,3,0	1/1:6,2:8:3.01:71,3,0	1/1:10,1:13:6.02:123,6,0	1/1:6,10:16:24.08:567,24,0	1/1:3,0:5:6.02:105,6,0
chr10	37743266	.	C	CGT	8644.38	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=8.591;DP=545;FS=3.348;HRun=0;HaplotypeScore=174.4399;InbreedingCoeff=0.9668;MQ=56.11;MQ0=11;MQRankSum=-8.086;QD=20.93;ReadPosRankSum=3.815;VQSLOD=4.8767;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:30:45.03:636,45,0	1/1:10,0:9:20.88:178,21,0	0/0:22,0:15:27.10:0,27,508	0/0:29,0:16:44.25:0,44,528	0/0:19,0:19:38.13:0,38,452	1/1:21,0:21:50.90:560,51,0	1/1:20,1:20:47.75:569,48,0	1/1:12,0:11:30.04:376,30,0	0/0:18,0:18:54.14:0,54,691	1/1:17,0:17:30.70:523,31,0	1/1:16,0:16:23.30:208,23,0	1/1:20,0:20:46.39:427,46,0	1/1:12,0:12:25.75:233,26,0	1/1:20,0:20:41.46:432,41,0	1/1:30,0:30:65.71:597,66,0	0/0:13,0:13:27.07:0,27,319	0/0:31,0:31:71.94:0,72,835	1/1:20,3:22:48.05:558,48,0	1/1:12,0:8:20.85:278,21,0	1/1:23,0:23:47.17:504,47,0	1/1:14,2:14:5.95:93,6,0	1/1:19,0:19:29.75:297,30,0	1/1:11,0:11:17.90:172,18,0	1/1:30,2:32:14.63:140,15,0	1/1:15,1:16:17.01:230,17,0	1/1:26,0:25:72.18:1015,72,0	1/1:17,0:17:39.81:425,40,0	1/1:9,0:9:17.76:192,18,0
chr10	37743267	.	GCACACA	G	7099.79	PASS	AB=0.680;AC=41;AF=0.820;AN=50;BaseQRankSum=7.952;DP=524;FS=12.364;HRun=0;HaplotypeScore=198.0324;InbreedingCoeff=0.4658;MQ=56.44;MQ0=11;MQRankSum=-7.815;QD=17.36;ReadPosRankSum=2.904;VQSLOD=3.5395;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:21,1:27:11.87:119,12,0	1/1:4,6:9:18.06:363,18,0	./.	./.	0/0:16,0:19:27.09:0,27,416	1/1:10,9:20:27.09:533,27,0	1/1:14,5:19:18.06:368,18,0	0/0:13,0:11:2.04:0,2,6	0/0:13,0:18:18.81:0,19,256	1/1:7,5:14:21.07:375,21,0	1/1:3,9:14:18.06:330,18,0	1/1:10,0:20:30.10:418,30,0	1/1:4,6:11:18.06:344,18,0	1/1:11,7:19:24.08:472,24,0	1/1:9,18:29:51.17:1006,51,0	0/1:4,0:13:35.98:36,0,138	0/1:17,0:30:12.19:12,0,453	1/1:10,9:20:24.08:452,24,0	1/1:12,0:9:3.01:42,3,0	1/1:12,9:22:27.09:525,27,0	./.	1/1:8,8:18:21.03:369,21,0	1/1:7,0:11:12.04:167,12,0	1/1:21,0:31:12.04:156,12,0	1/1:4,2:15:24.03:293,24,0	1/1:20,1:24:9.77:169,10,0	1/1:7,10:17:24.08:491,24,0	0/1:6,0:9:22.56:58,0,23
chr10	37745136	.	A	AG	15949.80	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-12.938;DP=654;FS=12.304;HRun=6;HaplotypeScore=61.1594;InbreedingCoeff=0.9870;MQ=77.60;MQ0=0;MQRankSum=-6.655;QD=31.46;ReadPosRankSum=4.255;VQSLOD=4.5035;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,51:57:99:1986,159,0	1/1:0,4:4:9.03:113,9,0	0/0:29,0:29:83.82:0,84,817	0/0:22,0:22:39.28:0,39,552	0/0:17,0:17:48.11:0,48,489	1/1:2,22:24:54.17:679,54,0	1/1:6,27:33:78.25:980,78,0	1/1:2,17:19:45.14:566,45,0	0/0:26,0:26:63.12:0,63,636	1/1:3,18:21:48.15:604,48,0	1/1:2,14:16:42.13:524,42,0	1/1:0,28:28:75.24:943,75,0	1/1:4,15:19:36.12:453,36,0	1/1:1,21:22:60.19:750,60,0	1/1:2,25:27:75.21:927,75,0	0/0:24,0:23:72.16:0,72,734	0/0:29,0:29:84.14:0,84,840	1/1:2,8:10:24.08:302,24,0	1/1:5,17:21:51.14:622,51,0	1/1:4,18:22:54.17:679,54,0	1/1:5,34:39:84.27:1057,84,0	1/1:1,21:22:51.16:640,51,0	1/1:1,15:16:48.15:598,48,0	1/1:0,25:25:72.23:906,72,0	1/1:0,18:18:48.15:604,48,0	1/1:2,30:32:84.25:1040,84,0	1/1:3,20:23:57.18:712,57,0	1/1:1,7:8:21.07:264,21,0
chr10	37745336	.	CT	C	2322.04	PASS	AB=1.000;AC=33;AF=0.589;AN=56;BaseQRankSum=9.928;DP=476;FS=4.919;HRun=9;HaplotypeScore=92.8873;InbreedingCoeff=0.8838;MQ=78.63;MQ0=4;MQRankSum=-3.755;QD=8.76;ReadPosRankSum=-0.157;VQSLOD=2.1456;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:22:54.01:0,54,516	1/1:6,1:7:17.68:83,18,0	0/1:35,0:23:44.72:45,0,56	0/0:19,0:13:2.28:0,2,114	0/0:15,0:16:44.94:0,45,476	1/1:8,0:8:17.19:88,17,0	1/1:16,0:16:25.27:125,25,0	1/1:19,0:19:38.52:223,39,0	0/0:14,0:14:42.06:0,42,444	1/1:23,0:22:30.46:256,30,0	1/1:16,1:17:28.18:146,28,0	0/0:13,0:13:29.99:0,30,293	1/1:6,0:6:16.98:92,17,0	1/1:19,0:19:44.51:247,45,0	1/1:11,1:12:24.67:127,25,0	0/0:14,0:14:36.10:0,36,407	0/0:30,1:31:50.74:0,51,814	1/1:14,0:14:22.57:118,23,0	1/1:15,0:15:33.54:184,34,0	1/1:15,0:15:34.83:202,35,0	1/1:14,1:15:25.35:140,25,0	1/1:13,0:13:22.23:123,22,0	0/0:23,0:23:51.08:0,51,514	0/0:25,0:25:45.31:0,45,564	1/1:16,0:16:26.48:126,26,0	0/0:29,0:29:81.13:0,81,838	1/1:11,4:15:36.69:217,37,0	0/0:4,0:4:9.02:0,9,94
chr10	37745352	.	G	GGA	12688.62	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=0.232;DP=460;FS=2.767;HRun=0;HaplotypeScore=67.3328;InbreedingCoeff=0.9803;MQ=76.37;MQ0=4;MQRankSum=-2.816;QD=37.32;ReadPosRankSum=2.049;VQSLOD=6.9039;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,17:16:45.15:791,45,0	1/1:1,5:9:18.06:294,18,0	0/0:28,0:16:34.51:0,35,263	0/0:17,0:12:16.37:0,16,137	0/0:17,0:17:48.16:0,48,674	1/1:0,8:8:18.06:315,18,0	1/1:1,16:18:30.10:500,30,0	1/1:3,20:24:60.01:823,60,0	0/0:15,0:15:39.04:0,39,486	1/1:2,15:18:18.26:687,18,0	1/1:1,14:16:30.09:501,30,0	1/1:2,10:12:30.09:503,30,0	1/1:0,7:8:15.05:263,15,0	1/1:1,18:19:45.15:748,45,0	1/1:1,11:13:21.05:358,21,0	0/0:14,0:14:42.11:0,42,557	0/0:29,0:29:87.24:0,87,1198	1/1:1,8:10:26.98:423,27,0	1/1:1,16:18:51.10:770,51,0	1/1:1,14:15:30.01:492,30,0	1/1:1,12:13:21.04:368,21,0	1/1:0,9:10:21.07:355,21,0	1/1:1,18:19:44.98:793,45,0	1/1:1,19:21:54.18:922,54,0	1/1:2,13:17:36.12:602,36,0	1/1:2,28:31:87.20:1464,87,0	1/1:5,12:17:34.33:513,34,0	1/1:2,4:6:12.04:203,12,0
chr10	37746152	.	A	AGAGG	716.73	PASS	AB=1.000;AC=26;AF=0.619;AN=42;BaseQRankSum=-3.240;DP=205;FS=5.721;HRun=0;HaplotypeScore=45.0754;InbreedingCoeff=0.1537;MQ=95.25;MQ0=2;MQRankSum=0.316;QD=6.07;ReadPosRankSum=2.608;VQSLOD=0.3153;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:2.99:0,3,24	./.	0/0:20,0:16:8.67:0,9,78	0/0:25,0:19:1.25:0,1,3	1/1:10,0:11:11.99:130,12,0	0/0:7,0:7:2.99:0,3,23	1/1:13,0:13:3:26,3,0	1/1:8,0:8:3:28,3,0	1/1:2,4:6:2.84:72,3,0	0/1:6,0:6:15.57:39,0,16	./.	0/0:4,0:4:2.99:0,3,24	./.	0/1:2,0:2:15.76:19,0,16	1/1:4,0:4:6:51,6,0	1/1:10,1:11:12:172,12,0	1/1:7,6:13:6.02:145,6,0	1/1:7,0:7:2.98:22,3,0	0/0:3,0:3:0:0,0,0	./.	0/1:9,0:9:14.47:42,0,14	./.	./.	1/1:11,0:11:2.22:7,2,0	1/1:5,0:5:5.94:45,6,0	1/1:7,0:7:3:27,3,0	0/1:5,0:5:15.78:19,0,16	./.
chr10	37746176	.	GGAGAGAGA	G	2290.36	PASS	AB=1.000;AC=25;AF=0.500;AN=50;BaseQRankSum=-3.116;DP=231;FS=6.942;HRun=0;HaplotypeScore=57.2899;InbreedingCoeff=0.0895;MQ=61.08;MQ0=10;MQRankSum=-1.575;QD=23.61;ReadPosRankSum=-6.400;VQSLOD=-0.5966;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:12,0:12:22.59:420,0,23	./.	0/0:30,0:9:20.64:0,21,233	0/0:39,0:12:6.53:0,7,265	0/0:12,0:11:24.08:0,24,461	0/1:3,0:2:44.82:48,0,45	1/1:3,0:3:6.02:108,6,0	0/1:3,0:3:34.74:103,0,35	0/0:11,0:11:21.07:0,21,533	0/1:9,0:9:99:152,0,133	1/1:4,0:4:9.03:129,9,0	0/1:5,0:5:38.80:133,0,39	1/1:7,0:7:7.24:146,7,0	0/1:5,0:5:42.90:43,0,45	./.	0/0:10,0:10:24.08:0,24,584	0/0:19,0:19:36.12:0,36,963	0/1:2,0:2:39.88:46,0,40	1/1:5,0:2:2.95:42,3,0	1/1:2,3:4:5.98:60,6,0	0/1:14,0:13:82.85:385,0,83	./.	0/0:2,3:5:0:0,0,0	1/1:5,0:4:6.02:106,6,0	0/1:8,0:8:22.61:275,0,23	1/1:5,0:5:9.03:157,9,0	0/0:6,0:2:3.01:0,3,57	1/1:2,0:2:6.02:103,6,0
chr10	37747681	.	G	GGCCACCAT	45838.94	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-8.627;DP=646;FS=5.224;HRun=0;HaplotypeScore=152.0077;InbreedingCoeff=0.9861;MQ=66.32;MQ0=0;MQRankSum=-17.770;QD=98.58;ReadPosRankSum=-0.534;VQSLOD=5.2747;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,33:45:99:4596,108,0	1/1:4,6:10:27.09:1184,27,0	0/0:19,0:19:45.15:0,45,1105	0/0:31,0:29:72.21:0,72,1714	0/0:28,0:28:81.24:0,81,2042	1/1:4,9:13:36.12:1515,36,0	1/1:10,18:30:72.25:3019,72,0	1/1:17,11:31:90.27:3274,90,0	0/0:30,0:30:87.28:0,87,2294	1/1:5,18:25:72.25:3119,72,0	1/1:2,9:16:24.08:1059,24,0	1/1:4,13:18:51.18:2121,51,0	1/1:5,16:25:63.22:2643,63,0	1/1:5,10:15:39.13:1659,39,0	1/1:8,22:33:93.32:3736,93,0	0/0:22,0:22:60.21:0,60,1691	0/0:51,0:51:99:0,150,4094	1/1:2,10:13:36.12:1593,36,0	1/1:8,9:19:51.17:1808,51,0	1/1:6,12:18:39.13:1720,39,0	1/1:12,8:23:27.09:1096,27,0	1/1:7,13:21:39.13:1719,39,0	1/1:7,8:16:27.09:1173,27,0	1/1:7,7:15:20:850,20,0	1/1:5,9:17:36.12:1555,36,0	1/1:30,0:30:84.29:3075,84,0	1/1:4,23:27:69.24:2983,69,0	1/1:3,0:3:9.03:344,9,0
chr10	37747682	.	G	GCCACCATC	40119.66	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-2.582;DP=635;FS=7.900;HRun=0;HaplotypeScore=171.9552;InbreedingCoeff=0.9673;MQ=66.25;MQ0=0;MQRankSum=-18.363;QD=88.37;ReadPosRankSum=0.475;VQSLOD=5.1589;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:43,0:43:89.38:3939,89,0	1/1:10,0:10:5.10:996,5,0	0/0:19,0:19:48.16:0,48,1173	0/0:31,0:29:72.21:0,72,1830	0/0:28,0:28:84.26:0,84,2144	1/1:13,0:13:36.12:1300,36,0	1/1:28,0:28:51.26:2563,51,0	1/1:33,0:33:85.16:2663,85,0	0/0:30,0:30:87.28:0,87,2350	1/1:26,0:26:72.25:2632,72,0	1/1:13,0:13:24.08:923,24,0	1/1:17,0:17:51.18:1814,51,0	1/1:22,0:22:63.22:2288,63,0	1/1:15,0:15:39.13:1429,39,0	1/1:32,0:32:93.32:3201,93,0	0/0:22,0:22:60.21:0,60,1722	0/0:51,0:51:99:0,154,4258	1/1:12,0:12:33.11:1240,33,0	1/1:18,0:18:45.10:1383,45,0	1/1:18,0:17:39.13:1492,39,0	1/1:23,0:23:27.09:950,27,0	1/1:22,0:22:39.13:1493,39,0	1/1:15,0:15:27.09:1017,27,0	1/1:16,0:16:20:730,20,0	1/1:16,0:17:36.12:1356,36,0	1/1:5,23:30:84.29:3603,84,0	1/1:27,0:26:69.24:2573,69,0	1/1:1,3:4:12.04:535,12,0
chr10	37748051	.	A	ATT	4253.02	PASS	AB=0.875;AC=42;AF=0.750;AN=56;BaseQRankSum=5.346;DP=609;FS=0.000;HRun=12;HaplotypeScore=96.6256;InbreedingCoeff=0.7638;MQ=71.64;MQ0=1;MQRankSum=-2.059;QD=8.75;ReadPosRankSum=-0.146;VQSLOD=2.8768;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:26:65.49:0,65,573	1/1:2,0:9:12.48:43,12,0	0/0:12,0:10:14.61:0,15,109	0/1:22,0:17:14.50:14,0,127	0/0:26,0:26:47.86:0,48,439	1/1:8,1:30:18.17:153,18,0	1/1:2,1:23:45.43:189,45,0	1/1:11,0:32:49.39:233,49,0	0/0:17,0:18:50.98:0,51,458	1/1:5,0:25:44.36:164,44,0	1/1:2,0:20:37.76:140,38,0	1/1:5,17:24:47.59:617,48,0	1/1:2,0:25:50.01:174,50,0	1/1:5,0:12:17.34:60,17,0	1/1:10,0:33:5.02:122,5,0	0/0:20,0:20:44.94:0,45,409	0/0:19,0:20:38.87:0,39,408	1/1:4,1:18:26.78:127,27,0	1/1:7,0:19:5.97:126,6,0	1/1:2,0:24:45.11:195,45,0	0/1:4,0:6:19.09:19,0,67	1/1:7,0:32:39.93:138,40,0	1/1:6,19:27:46.95:584,47,0	1/1:0,18:19:48.16:660,48,0	1/1:1,1:13:20.46:85,20,0	1/1:4,0:30:35.72:194,36,0	1/1:4,0:31:27.64:154,28,0	1/1:2,0:11:17.47:60,17,0
chr10	37748886	.	G	GAA	4927.65	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=11.996;DP=526;FS=16.311;HRun=3;HaplotypeScore=143.4705;InbreedingCoeff=0.9444;MQ=60.56;MQ0=3;MQRankSum=-4.753;QD=13.04;ReadPosRankSum=-5.459;VQSLOD=-0.3255;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:10,1:35:32.99:250,33,0	0/0:4,0:4:3.66:0,4,13	0/0:14,0:9:20.27:0,20,259	0/0:30,0:14:35.82:0,36,443	0/0:27,0:27:78.26:0,78,1091	1/1:9,5:18:39.35:401,39,0	1/1:15,5:24:34.95:367,35,0	1/1:10,5:16:16.80:233,17,0	0/0:20,0:20:48.16:0,48,671	1/1:14,3:18:34.78:287,35,0	1/1:11,8:21:35.70:380,36,0	1/1:8,1:18:19.08:109,19,0	1/1:5,6:14:18.96:210,19,0	1/1:11,2:12:24.70:223,25,0	1/1:9,4:11:22.23:242,22,0	0/0:16,0:16:39.13:0,39,545	0/0:37,0:37:95.66:0,96,1289	1/1:2,8:10:12.04:181,12,0	1/1:7,3:12:14.86:145,15,0	1/1:9,3:12:13.82:138,14,0	1/1:6,3:10:12.84:99,13,0	1/1:14,7:21:34.69:404,35,0	1/1:11,0:16:19.07:167,19,0	1/1:6,0:15:20.88:132,21,0	1/1:11,3:17:17.74:225,18,0	1/1:18,2:29:34.20:239,34,0	1/1:6,5:12:21.13:180,21,0	1/1:12,2:24:42.77:317,43,0
chr10	37748889	.	ATT	A	6398.92	PASS	AB=1.000;AC=45;AF=0.804;AN=56;BaseQRankSum=12.656;DP=496;FS=0.867;HRun=2;HaplotypeScore=120.6367;InbreedingCoeff=0.8652;MQ=62.12;MQ0=3;MQRankSum=-8.486;QD=17.20;ReadPosRankSum=-5.143;VQSLOD=0.4271;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:32,1:33:56.15:490,56,0	1/1:3,1:4:2.51:41,3,0	0/1:14,0:9:6.35:6,0,383	0/0:31,0:16:45.05:0,45,721	0/0:28,0:28:84.29:0,84,1469	1/1:21,0:20:46.81:381,47,0	1/1:19,3:21:50.17:392,50,0	1/1:14,0:14:31.94:216,32,0	0/0:18,0:18:51.17:0,51,893	1/1:15,3:18:48.66:433,49,0	1/1:19,1:19:45.18:355,45,0	1/1:20,0:20:36.43:269,36,0	1/1:13,0:13:22.49:149,22,0	1/1:13,0:12:25.71:202,26,0	1/1:12,1:12:32.14:353,32,0	0/0:13,0:13:39.13:0,39,685	0/0:33,0:33:96.33:0,96,1664	1/1:8,0:8:14.99:132,15,0	1/1:12,1:11:23.68:215,24,0	1/1:10,2:11:24.11:165,24,0	1/1:9,0:9:18.74:122,19,0	1/1:17,1:18:46.74:380,47,0	1/1:11,1:12:29.08:268,29,0	1/1:13,1:14:24.12:187,24,0	1/1:14,2:16:36.84:345,37,0	1/1:25,3:26:66.86:571,67,0	1/1:9,1:11:25.58:195,26,0	1/1:21,2:24:59.19:530,59,0
chr10	37748996	.	AACACAC	A	1031.35	PASS	AB=0.814;AC=29;AF=0.580;AN=50;BaseQRankSum=3.042;DP=491;FS=3.189;HRun=0;HaplotypeScore=120.0505;InbreedingCoeff=0.4912;MQ=63.49;MQ0=8;MQRankSum=-3.818;QD=4.26;ReadPosRankSum=-1.402;VQSLOD=2.0704;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:33:25.27:0,25,281	0/1:3,2:5:0:0,0,0	0/0:34,0:18:3:0,3,26	0/0:47,0:35:3:0,3,26	0/0:11,0:11:18.06:0,18,510	1/1:9,9:21:9.92:184,10,0	1/1:14,8:22:2.75:60,3,0	1/1:26,0:23:2.99:25,3,0	0/0:12,0:14:21.07:0,21,534	1/1:7,3:10:9.01:145,9,0	1/1:5,4:10:0.39:1,0,0	./.	1/1:11,4:15:6.02:118,6,0	./.	1/1:7,4:11:3.01:61,3,0	0/0:9,0:11:21.07:0,21,560	0/0:32,0:33:54.10:0,54,1311	1/1:10,0:11:6.02:103,6,0	1/1:10,2:11:6.02:91,6,0	1/1:3,3:5:2.97:20,3,0	0/1:29,0:28:16.51:118,0,17	1/1:11,2:16:6.02:102,6,0	1/1:10,0:19:2.53:36,3,0	0/1:15,0:23:6.81:7,0,14	1/1:2,3:5:6.02:122,6,0	0/0:7,0:10:4.21:0,4,73	./.	0/0:5,0:15:20.20:0,20,267
chr10	37749306	.	T	TA	2769.99	PASS	AC=42;AF=0.778;AN=54;BaseQRankSum=2.259;DP=176;FS=2.528;HRun=3;HaplotypeScore=26.6319;InbreedingCoeff=0.6639;MQ=55.97;MQ0=4;MQRankSum=-3.271;QD=23.08;ReadPosRankSum=-0.917;VQSLOD=2.5545;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,8:8:15.05:214,15,0	1/1:0,3:3:9.03:115,9,0	0/0:5,0:4:5.95:0,6,60	0/0:10,0:5:9.03:0,9,107	0/0:4,0:4:12.04:0,12,148	1/1:0,5:5:12.04:167,12,0	1/1:0,3:3:3.01:43,3,0	1/1:7,17:15:38.31:482,38,0	0/0:3,0:3:9.03:0,9,111	1/1:0,4:4:12.01:134,12,0	1/1:0,4:4:9.03:119,9,0	1/1:0,2:2:6.02:83,6,0	1/1:0,1:1:3.01:43,3,0	1/1:0,2:2:6.02:84,6,0	1/1:1,3:4:9.03:129,9,0	0/0:6,0:6:12.04:0,12,149	0/0:26,0:28:75.11:0,75,894	1/1:2,9:11:20.80:268,21,0	1/1:0,6:6:17.99:232,18,0	1/1:0,1:1:3.01:43,3,0	1/1:1,2:3:3.01:43,3,0	./.	1/1:0,5:5:6.02:74,6,0	1/1:1,1:2:3.01:43,3,0	1/1:0,4:4:12.04:165,12,0	1/1:0,0:4:12:127,12,0	1/1:0,6:6:18.06:258,18,0	1/1:3,0:18:8.99:74,9,0
chr10	37749547	.	GA	G	10862.56	PASS	AC=42;AF=0.778;AN=54;BaseQRankSum=9.654;DP=382;FS=7.826;HRun=2;HaplotypeScore=59.7915;InbreedingCoeff=0.9172;MQ=82.35;MQ0=0;MQRankSum=-3.798;QD=36.45;ReadPosRankSum=1.050;VQSLOD=5.2571;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,37:37:99:1324,102,0	./.	0/0:10,0:10:27.09:0,27,390	0/0:18,0:18:47.48:0,47,632	0/0:4,0:4:12.04:0,12,180	1/1:0,13:13:39.13:506,39,0	1/1:1,17:18:45.15:584,45,0	1/1:0,21:21:63.20:818,63,0	0/0:14,0:14:42.13:0,42,611	1/1:0,7:7:21.07:273,21,0	1/1:0,3:3:9.03:117,9,0	1/1:0,8:8:24.08:312,24,0	1/1:0,5:5:12.04:156,12,0	1/1:0,11:11:27.09:351,27,0	1/1:0,16:16:45.15:584,45,0	0/0:9,0:9:27.08:0,27,385	0/0:29,0:29:87.29:0,87,1301	1/1:0,16:16:48.16:623,48,0	1/1:0,20:20:60.17:752,60,0	1/1:0,3:3:9.03:117,9,0	1/1:1,28:29:84.27:1089,84,0	1/1:0,3:3:9.03:117,9,0	1/1:0,1:1:3.01:39,3,0	1/1:0,25:25:63.20:818,63,0	1/1:0,10:10:30.10:390,30,0	1/1:0,18:18:54.18:701,54,0	1/1:0,18:18:48.15:616,48,0	1/1:0,16:16:45.14:576,45,0
chr10	37749719	.	CT	C	397.32	PASS	AB=0.981;AC=24;AF=0.429;AN=56;BaseQRankSum=4.666;DP=484;FS=0.454;HRun=15;HaplotypeScore=100.4097;InbreedingCoeff=-0.0417;MQ=72.03;MQ0=0;MQRankSum=-0.434;QD=1.38;ReadPosRankSum=2.803;VQSLOD=-0.4501;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:32.97:0,33,251	0/1:4,0:4:5.90:6,0,9	0/0:17,0:14:17.31:0,17,162	0/0:12,0:11:2.99:0,3,23	0/1:10,3:15:0.97:1,0,99	0/1:17,0:17:19.51:28,0,20	0/1:21,0:21:9.30:22,0,9	0/1:22,0:22:12.92:45,0,13	0/0:15,2:17:4.70:0,5,155	1/1:16,0:16:0.50:21,1,0	1/1:4,0:4:5.11:20,5,0	0/0:13,0:13:20.20:0,20,112	0/1:9,0:9:8.18:8,0,14	1/1:17,0:17:3.72:64,4,0	1/1:13,0:13:1.19:46,1,0	0/0:14,1:15:14.56:0,15,230	0/0:29,2:32:21.77:0,22,376	0/1:21,0:21:35.86:53,0,36	0/1:22,1:23:24.80:39,0,25	0/1:8,0:8:0.76:1,0,16	0/1:20,0:20:3.47:89,0,3	1/1:14,0:14:13.21:50,13,0	0/0:16,0:16:17.72:0,18,100	0/0:26,0:26:28.32:0,28,148	0/1:11,0:11:20.01:26,0,20	0/1:22,0:22:4.96:5,0,70	0/1:14,0:14:10.13:10,0,30	0/1:15,1:16:19.19:19,0,91
chr10	37749733	.	T	TA	3784.82	PASS	AB=0.671;AC=30;AF=0.536;AN=56;BaseQRankSum=4.483;DP=505;FS=14.164;HRun=0;HaplotypeScore=100.3460;InbreedingCoeff=0.6427;MQ=65.96;MQ0=0;MQRankSum=-0.833;QD=13.05;ReadPosRankSum=4.411;VQSLOD=4.3312;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:48,7:55:13.80:238,0,14	1/1:2,3:5:3.14:56,3,0	0/0:16,0:13:31.59:0,32,297	0/0:8,0:6:8.99:0,9,87	0/0:17,0:17:31.13:0,31,284	1/1:5,13:18:9.93:169,10,0	1/1:7,17:24:23.63:259,24,0	1/1:5,18:23:46.11:467,46,0	0/0:17,0:17:35.98:0,36,361	1/1:9,5:14:30.98:271,31,0	1/1:0,4:4:11.93:104,12,0	0/0:17,0:17:15.41:0,15,96	1/1:3,8:11:6.59:85,7,0	1/1:4,13:17:32.11:356,32,0	1/1:6,8:14:15.24:291,15,0	0/0:15,0:15:44.99:0,45,457	0/0:31,0:31:77.84:0,78,826	0/1:7,19:26:24.41:340,0,24	1/1:9,10:19:16.83:302,17,0	1/1:5,2:7:7.20:71,7,0	1/1:14,8:22:12.94:319,13,0	1/1:1,9:10:23.97:235,24,0	0/0:16,0:16:14.17:0,14,101	0/0:32,0:32:28.99:0,29,194	0/1:3,4:7:19.55:93,0,20	0/0:28,0:28:47.32:0,47,312	0/1:4,10:14:11.81:128,0,12	0/0:18,0:18:50.87:0,51,281
chr10	37749734	.	T	TAA	8466.16	PASS	AB=1.000;AC=41;AF=0.732;AN=56;BaseQRankSum=4.690;DP=519;FS=6.674;HRun=2;HaplotypeScore=104.4902;InbreedingCoeff=0.8728;MQ=65.57;MQ0=0;MQRankSum=-3.176;QD=21.22;ReadPosRankSum=0.204;VQSLOD=2.6437;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:10,45:54:85.53:1304,86,0	1/1:4,1:5:10.63:130,11,0	0/0:18,0:15:23.38:0,23,336	0/0:8,0:6:12.03:0,12,151	0/0:16,0:17:27.03:0,27,356	1/1:20,0:20:29.59:290,30,0	1/1:21,2:23:38.95:439,39,0	1/1:25,1:26:68.07:869,68,0	0/0:14,0:14:30.09:0,30,408	1/1:15,0:15:41.34:521,41,0	1/1:4,0:4:12.04:161,12,0	1/1:0,0:17:10.15:75,10,0	1/1:11,0:11:20.09:249,20,0	1/1:17,1:18:44.96:543,45,0	1/1:14,1:15:36.11:514,36,0	0/0:15,0:15:36.11:0,36,496	0/0:30,0:30:72.14:0,72,911	1/1:25,1:26:54.12:612,54,0	1/1:22,0:22:53.14:608,53,0	1/1:7,0:7:18.26:174,18,0	1/1:23,1:24:52.84:655,53,0	1/1:12,0:12:30.09:389,30,0	1/1:0,0:17:18.70:129,19,0	1/1:1,0:31:24.84:137,25,0	1/1:8,0:8:17.20:181,17,0	0/1:27,0:27:56.67:109,0,57	1/1:15,1:16:31.74:376,32,0	0/0:16,0:18:12.73:0,13,86
chr10	37750378	.	T	TC	18143.24	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=11.335;DP=663;FS=5.007;HRun=3;HaplotypeScore=96.5790;InbreedingCoeff=0.9969;MQ=91.80;MQ0=0;MQRankSum=-5.906;QD=35.30;ReadPosRankSum=4.898;VQSLOD=5.0227;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,42:44:99:1595,114,0	1/1:1,7:8:18.06:252,18,0	0/0:27,0:27:72.15:0,72,832	0/0:28,0:28:69.07:0,69,748	0/0:20,0:20:41.74:0,42,448	1/1:0,22:22:63.21:881,63,0	1/1:1,30:31:78.26:1090,78,0	1/1:1,21:22:60.17:798,60,0	0/0:18,0:18:48.13:0,48,554	1/1:1,25:26:72.23:985,72,0	1/1:2,13:15:30.10:420,30,0	1/1:1,25:26:66.22:923,66,0	1/1:0,21:21:54.18:756,54,0	1/1:2,23:25:63.21:878,63,0	1/1:0,23:23:54.18:756,54,0	0/0:12,0:12:36.10:0,36,420	0/0:44,0:44:99:0,120,1397	1/1:2,24:26:57.19:798,57,0	1/1:5,17:22:60.17:804,60,0	1/1:1,11:12:27.09:378,27,0	1/1:4,57:61:99:2183,157,0	1/1:0,10:10:27.09:377,27,0	1/1:3,10:13:30.10:420,30,0	1/1:1,26:27:72.24:1008,72,0	1/1:3,17:20:48.16:672,48,0	1/1:1,24:25:69.14:922,69,0	1/1:0,27:27:69.23:958,69,0	1/1:1,7:8:21.07:290,21,0
chr10	37750614	.	T	TTCTTTC	12519.76	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=2.069;DP=616;FS=5.212;HRun=0;HaplotypeScore=170.0726;InbreedingCoeff=0.9268;MQ=54.79;MQ0=30;MQRankSum=-6.545;QD=28.26;ReadPosRankSum=6.472;VQSLOD=3.8761;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,18:32:24.06:725,24,0	1/1:7,0:7:20.98:241,21,0	0/0:38,0:16:34.55:0,35,406	0/0:43,0:15:13.53:0,14,281	0/0:31,0:30:68.23:0,68,990	1/1:20,0:19:15.37:371,15,0	1/1:17,0:15:32.81:432,33,0	1/1:18,0:18:16.28:340,16,0	0/0:17,0:16:42.23:0,42,607	1/1:33,0:32:78.01:1094,78,0	1/1:28,0:25:63:868,63,0	1/1:14,0:14:13.83:407,14,0	1/1:17,0:16:30.03:512,30,0	1/1:16,0:15:1.01:316,1,0	1/1:14,0:14:17.28:468,17,0	0/0:16,0:16:15.13:0,15,580	0/0:28,0:22:51.45:0,51,789	1/1:15,0:13:16.52:345,17,0	1/1:21,0:20:40.19:579,40,0	1/1:23,0:23:63.13:1097,63,0	1/1:10,0:9:20.50:307,20,0	1/1:15,0:14:38.09:532,38,0	1/1:28,0:27:43.91:801,44,0	1/1:15,0:13:15.12:263,15,0	1/1:26,0:25:62.86:954,63,0	1/1:25,0:23:40.78:768,41,0	1/1:28,0:25:50.65:788,51,0	1/1:19,0:18:17.97:311,18,0
chr10	37750615	.	T	TC	4913.39	PASS	AB=0.769;AC=41;AF=0.732;AN=56;BaseQRankSum=5.555;DP=610;FS=23.253;HRun=0;HaplotypeScore=142.3234;InbreedingCoeff=0.6673;MQ=53.50;MQ0=31;MQRankSum=-4.076;QD=11.24;ReadPosRankSum=6.667;VQSLOD=3.1849;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:28,1:27:22.10:105,22,0	1/1:5,2:7:14.17:103,14,0	0/0:37,0:15:26.04:0,26,207	0/0:43,0:15:17.50:0,17,156	0/0:32,0:31:77.51:0,78,630	1/1:4,16:19:20.34:189,20,0	1/1:13,3:14:3.97:96,4,0	1/1:16,0:16:9.19:130,9,0	0/0:16,0:15:38.54:0,39,355	1/1:25,7:32:65.31:463,65,0	1/1:22,6:25:57:395,57,0	0/1:9,4:14:2.45:125,0,2	1/1:13,4:16:32.58:254,33,0	1/1:16,1:16:3.28:153,3,0	1/1:9,5:14:1.47:184,1,0	0/0:16,0:16:38.31:0,38,351	0/0:29,0:23:37:0,37,419	0/1:12,3:13:10.22:137,0,10	1/1:21,1:21:4.35:186,4,0	1/1:11,12:23:62.49:466,62,0	0/1:7,3:9:3.30:72,0,3	1/1:12,3:14:28.66:199,29,0	1/1:18,11:28:35.49:330,35,0	1/1:10,5:13:15.11:126,15,0	1/1:15,10:25:39.72:394,40,0	1/1:19,6:23:45.60:366,46,0	1/1:22,6:26:19.40:310,19,0	1/1:2,5:15:17.81:134,18,0
chr10	37750616	.	T	TTTC	2938.77	PASS	AB=0.861;AC=26;AF=0.464;AN=56;BaseQRankSum=10.696;DP=611;FS=27.751;HRun=0;HaplotypeScore=169.5795;InbreedingCoeff=-0.2749;MQ=50.23;MQ0=33;MQRankSum=-4.752;QD=6.62;ReadPosRankSum=8.254;VQSLOD=1.1542;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:27,1:26:21.05:104,21,0	0/1:6,1:7:14.03:37,0,14	0/0:34,0:14:28.04:0,28,201	0/0:40,0:13:18.11:0,18,166	0/0:31,0:30:74.04:0,74,573	1/1:15,6:20:10.50:205,11,0	0/1:14,3:15:12.22:109,0,12	0/1:18,0:18:8.80:53,0,9	0/0:16,0:15:40.08:0,40,379	0/1:27,5:31:27.02:220,0,27	0/1:23,6:26:23.88:165,0,24	0/1:12,3:15:20.61:105,0,21	0/1:14,4:17:48.47:102,0,48	0/1:17,1:17:36.08:36,0,59	0/1:11,3:14:28.19:150,0,28	0/0:16,0:16:38.07:0,38,374	0/0:29,0:23:27.37:0,27,440	0/1:14,2:13:59.86:64,0,60	0/1:21,1:20:21.35:92,0,21	1/1:15,9:24:20.99:376,21,0	0/1:8,2:9:22.47:78,0,22	0/1:12,3:14:20.09:97,0,20	0/1:18,10:27:38.09:234,0,38	0/1:13,3:14:9.16:104,0,9	0/1:17,10:26:9.14:305,0,9	0/1:24,1:23:19.32:142,0,19	0/1:26,4:27:33.17:190,0,33	1/1:10,4:12:7.79:146,8,0
chr10	37752014	.	TAGAA	T	21729.16	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=14.902;DP=729;FS=6.024;HRun=0;HaplotypeScore=172.7483;InbreedingCoeff=0.9958;MQ=65.63;MQ0=0;MQRankSum=-10.639;QD=38.94;ReadPosRankSum=3.347;VQSLOD=4.9482;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,37:42:78.26:1412,78,0	1/1:0,9:9:18.06:320,18,0	0/0:35,0:35:72.91:0,73,1917	0/0:23,0:22:51.15:0,51,1188	0/0:35,0:35:93.30:0,93,2251	1/1:2,21:23:48.16:868,48,0	1/1:1,21:22:45.15:702,45,0	1/1:9,33:42:99:1519,99,0	0/0:26,0:26:75.26:0,75,1877	1/1:2,27:29:78.19:1311,78,0	1/1:0,21:21:51.17:920,51,0	1/1:1,23:24:57.19:989,57,0	1/1:0,21:21:36.12:640,36,0	1/1:3,24:27:72.24:1296,72,0	1/1:1,25:26:54.18:959,54,0	0/0:24,0:24:69.24:0,69,1832	0/0:27,0:27:81.20:0,81,1881	1/1:1,8:9:18.06:338,18,0	1/1:1,33:34:93.26:1583,93,0	1/1:1,34:35:87.30:1589,87,0	1/1:2,24:26:42.14:732,42,0	1/1:5,34:39:72.13:1275,72,0	1/1:0,27:27:66.14:1181,66,0	1/1:2,16:18:21.07:398,21,0	1/1:0,20:20:51.11:903,51,0	1/1:0,34:34:96.22:1568,96,0	1/1:0,19:19:39.03:715,39,0	1/1:0,11:11:30.10:509,30,0
chr10	37752882	.	C	CAG	402.75	PASS	AB=0.966;AC=28;AF=0.519;AN=54;BaseQRankSum=2.194;DP=599;FS=10.815;HRun=0;HaplotypeScore=159.7702;InbreedingCoeff=0.3532;MQ=61.66;MQ0=8;MQRankSum=-4.102;QD=1.17;ReadPosRankSum=-0.333;VQSLOD=2.1012;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:24:9.06:0,9,47	1/1:4,0:4:0.47:1,0,0	./.	0/1:53,0:24:0.01:0,0,0	0/0:33,0:33:36.09:0,36,398	0/0:22,0:22:0.86:0,1,2	0/1:14,0:14:0:0,0,0	1/1:24,0:23:1.29:3,1,0	0/0:25,0:28:53.63:0,54,533	1/1:24,0:22:6.73:52,7,0	0/1:13,0:12:0:0,0,0	0/1:21,0:21:27.87:28,0,39	0/1:19,0:19:6.30:71,0,6	1/1:12,0:12:0.84:2,1,0	1/1:24,0:24:5.47:68,5,0	0/1:12,8:21:65.42:76,0,65	0/0:29,0:33:26.03:0,26,571	0/0:14,0:14:1.92:0,2,10	1/1:22,0:22:9.02:48,9,0	0/1:16,0:15:0:0,0,0	1/1:13,0:11:0.05:0,0,0	0/1:19,0:19:0:0,0,0	0/0:25,0:25:5.10:0,5,25	0/0:22,0:22:1.65:0,2,22	1/1:15,0:15:0.47:1,0,0	1/1:17,0:18:17.80:130,18,0	0/0:14,0:14:2.16:0,2,5	1/1:11,0:12:5.06:53,5,0
chr10	37752916	.	GAC	G	1549.51	PASS	AB=0.976;AC=35;AF=0.700;AN=50;BaseQRankSum=6.826;DP=486;FS=10.431;HRun=0;HaplotypeScore=144.1598;InbreedingCoeff=0.1892;MQ=39.77;MQ0=12;MQRankSum=-6.794;QD=4.54;ReadPosRankSum=-3.951;VQSLOD=0.9556;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:24,2:24:10.37:96,0,10	1/1:5,0:5:10.04:57,10,0	./.	./.	0/0:29,0:28:63.07:0,63,862	0/1:19,0:17:4.59:16,0,5	1/1:15,0:12:3.62:19,4,0	1/1:26,0:22:29.59:141,30,0	0/0:35,1:36:61.57:0,62,1057	1/1:27,0:24:12.14:188,12,0	1/1:14,0:13:2.91:25,3,0	1/1:8,8:16:23.85:269,24,0	0/1:18,0:18:8.02:109,0,8	1/1:7,0:6:8.02:54,8,0	1/1:25,0:25:14.32:111,14,0	0/0:20,0:20:29.57:0,30,372	0/0:45,0:43:0.32:0,0,945	0/1:18,0:17:3.97:92,0,4	1/1:18,0:16:18.15:132,18,0	1/1:13,0:12:3.47:26,3,0	1/1:17,0:15:1.62:23,2,0	./.	0/1:12,0:11:15.74:17,0,16	0/1:16,2:18:13.14:13,0,16	1/1:16,0:16:2.60:25,3,0	0/1:15,0:13:21.58:93,0,22	1/1:11,0:11:16.52:111,17,0	1/1:5,0:4:6.49:85,6,0
chr10	37752922	.	GAC	G	1095.12	PASS	AB=0.985;AC=31;AF=0.620;AN=50;BaseQRankSum=8.198;DP=459;FS=3.502;HRun=0;HaplotypeScore=151.3191;InbreedingCoeff=0.1587;MQ=39.78;MQ0=12;MQRankSum=-5.362;QD=3.63;ReadPosRankSum=-2.733;VQSLOD=2.4641;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:25:14.97:83,0,15	1/1:5,0:5:6.65:51,7,0	./.	./.	0/0:29,0:28:57.18:0,57,1036	1/1:8,10:16:3.64:18,4,0	1/1:15,0:12:3.70:22,4,0	0/1:22,0:17:30.59:31,0,113	0/0:38,0:38:90.82:0,91,1698	1/1:23,0:20:9.37:166,9,0	0/1:12,0:11:0.08:0,0,0	1/1:15,0:15:23.86:272,24,0	0/1:16,0:16:13.60:64,0,14	1/1:7,0:6:7.53:51,8,0	1/1:22,0:23:7.56:81,8,0	0/0:20,0:20:48.12:0,48,824	0/0:45,0:43:91.67:0,92,1582	0/1:17,0:17:5.26:97,0,5	0/1:14,0:13:24.37:80,0,24	1/1:10,0:9:3:25,3,0	1/1:13,2:13:1.62:23,2,0	./.	0/0:12,0:11:3.41:0,3,19	0/1:17,2:19:13.15:13,0,15	1/1:15,0:15:3:26,3,0	0/1:13,0:11:0.76:55,0,1	0/1:11,0:11:5.86:79,0,6	1/1:3,0:3:3.48:12,3,0
chr10	37752923	.	A	AAG	995.42	PASS	AB=0.889;AC=11;AF=0.212;AN=52;BaseQRankSum=1.609;DP=436;FS=7.372;HRun=0;HaplotypeScore=147.5232;InbreedingCoeff=0.0011;MQ=39.89;MQ0=13;MQRankSum=-7.144;QD=7.27;ReadPosRankSum=-1.490;VQSLOD=2.1699;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,7:25:16.67:0,17,168	0/0:5,0:5:14.25:0,14,141	./.	./.	0/0:27,0:26:57.19:0,57,925	0/1:16,2:16:4.65:27,0,5	0/0:13,1:11:2.52:0,3,13	0/1:10,7:14:99:519,0,113	0/0:38,0:38:93.73:0,94,1586	0/1:18,0:15:12.77:13,0,328	0/0:6,4:10:0:0,0,0	0/0:15,0:15:22.69:0,23,169	0/1:12,3:16:8.55:9,0,209	0/0:6,0:5:9.03:0,9,105	0/0:19,1:22:14.58:0,15,152	0/0:20,0:20:48.14:0,48,749	0/0:45,0:43:99:0,114,1797	0/1:16,1:17:58.12:58,0,285	0/1:9,2:12:99:247,0,141	0/0:6,0:7:3.01:0,3,35	0/0:9,1:13:3.76:0,4,36	0/1:7,0:8:0:0,0,0	0/1:9,2:10:10.27:10,0,40	0/0:16,2:18:6.02:0,6,82	0/0:9,2:13:6.02:0,6,77	0/1:9,2:10:48.95:177,0,49	0/0:11,0:11:14.92:0,15,206	1/1:2,1:2:6.01:67,6,0
chr10	37752929	.	A	AAG	429.84	PASS	AB=0.947;AC=10;AF=0.179;AN=56;BaseQRankSum=1.635;DP=446;FS=10.268;HRun=0;HaplotypeScore=155.6297;InbreedingCoeff=-0.0262;MQ=38.95;MQ0=15;MQRankSum=-5.941;QD=3.23;ReadPosRankSum=-2.261;VQSLOD=1.5647;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,4:25:21.40:0,21,165	0/0:4,0:4:12.01:0,12,115	0/0:3,0:1:3.01:0,3,31	0/0:6,0:1:1.82:0,2,5	0/0:27,0:26:51.17:0,51,823	0/1:17,2:17:11.83:45,0,12	1/1:13,2:12:2.81:22,3,0	0/1:19,0:13:83.93:212,0,84	0/0:36,0:36:87.71:0,88,1482	0/1:16,1:14:44.65:45,0,235	0/0:9,1:9:0:0,0,0	0/0:16,0:16:21.42:0,21,249	0/0:15,0:15:0.31:0,0,132	0/0:5,1:5:6.02:0,6,71	0/0:19,1:21:13.20:0,13,98	0/0:21,0:21:48.11:0,48,731	0/0:43,0:42:99:0,108,1719	0/0:19,0:18:9.39:0,9,310	0/1:10,2:11:99:199,0,152	0/0:8,0:7:3.01:0,3,34	0/0:15,0:13:2.87:0,3,34	0/1:12,0:12:0:0,0,0	0/1:12,0:11:10.27:10,0,38	0/0:16,2:19:6.02:0,6,79	0/0:13,1:14:2.99:0,3,23	0/1:14,0:12:5.62:6,0,227	0/1:11,1:13:16.85:17,0,181	0/0:3,0:2:5.84:0,6,34
chr10	37752955	.	A	AAG	184.40	PASS	AB=0.976;AC=10;AF=0.185;AN=54;BaseQRankSum=3.970;DP=422;FS=2.034;HRun=0;HaplotypeScore=163.1011;InbreedingCoeff=0.1041;MQ=42.35;MQ0=23;MQRankSum=-5.464;QD=1.41;ReadPosRankSum=-4.856;VQSLOD=1.2760;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:15,1:16:43.81:44,0,53	0/0:3,0:3:5.99:0,6,50	0/0:12,0:3:9.03:0,9,144	0/1:38,0:9:7.43:7,0,70	0/0:26,0:26:66.23:0,66,1060	0/0:15,0:13:8.99:0,9,92	0/0:12,0:10:2.36:0,2,9	0/1:13,0:7:5.11:5,0,72	0/0:29,0:29:78.25:0,78,1230	0/0:19,0:15:40.53:0,41,423	0/0:13,0:12:0:0,0,0	0/1:10,1:11:17.25:33,0,17	0/0:5,0:5:6.02:0,6,68	0/0:6,0:5:2.80:0,3,15	0/0:11,0:11:2.83:0,3,18	0/0:22,0:22:55.42:0,55,861	0/0:38,0:37:87.08:0,87,1350	0/0:13,0:12:18.87:0,19,268	0/0:18,0:13:35.54:0,36,385	0/0:9,0:8:2.98:0,3,21	0/0:10,0:9:0:0,0,0	0/0:16,0:16:2.90:0,3,35	1/1:7,4:10:15.41:126,15,0	1/1:11,3:14:1.51:3,2,0	./.	0/1:16,0:15:41.23:75,0,41	0/1:11,0:11:19.32:19,0,65	0/0:4,0:3:7.53:0,8,37
chr10	37752960	.	GAGA	G	1688.01	PASS	AB=0.722;AC=27;AF=0.482;AN=56;BaseQRankSum=7.289;DP=449;FS=3.991;HRun=0;HaplotypeScore=173.3710;InbreedingCoeff=0.2203;MQ=47.21;MQ0=21;MQRankSum=-8.657;QD=6.67;ReadPosRankSum=0.570;VQSLOD=3.0766;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:15,1:18:23.61:0,24,149	1/1:1,3:4:6.01:57,6,0	0/0:18,0:6:14.92:0,15,272	0/1:42,1:12:49.82:50,0,191	0/0:25,0:25:66.23:0,66,1505	1/1:5,10:13:11.95:146,12,0	1/1:5,8:11:10.96:68,11,0	0/1:7,6:9:46.95:219,0,47	0/0:29,0:29:75.26:0,75,1720	0/1:6,13:16:7.79:426,0,8	0/1:4,9:12:0:0,0,0	0/0:12,0:13:7.58:0,8,35	0/1:5,2:7:21.78:23,0,22	1/1:1,5:5:3.01:42,3,0	1/1:4,6:10:2.46:18,2,0	0/0:25,0:25:64.46:0,64,1375	0/0:39,0:38:99:0,105,2123	0/1:9,4:12:77.70:163,0,78	0/1:9,9:13:78.55:335,0,79	1/1:4,7:10:3.48:40,3,0	0/1:5,5:9:0:0,0,0	1/1:4,13:17:2.92:37,3,0	0/0:14,0:15:15.22:0,15,74	0/0:12,0:13:5.94:0,6,27	0/1:1,8:9:0:0,0,0	0/1:3,2:15:37.74:38,0,41	1/1:2,9:11:20.90:187,21,0	0/1:2,1:3:9.34:9,0,29
chr10	37752966	.	GA	G	2412.10	PASS	AB=0.716;AC=29;AF=0.518;AN=56;BaseQRankSum=8.074;DP=433;FS=1.709;HRun=3;HaplotypeScore=156.4900;InbreedingCoeff=0.5423;MQ=51.20;MQ0=16;MQRankSum=-9.976;QD=10.91;ReadPosRankSum=-5.509;VQSLOD=-0.2199;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:10,1:15:25.07:0,25,182	1/1:0,4:4:11.72:71,12,0	0/0:25,0:10:3.71:0,4,271	0/1:51,0:16:13.38:13,0,216	0/0:23,0:23:63.21:0,63,1007	1/1:4,10:13:32.70:325,33,0	1/1:2,10:12:13.64:217,14,0	0/1:4,7:9:20.58:168,0,21	0/0:27,0:27:72.23:0,72,1115	0/1:2,13:15:15.03:299,0,15	1/1:2,9:11:15.94:100,16,0	0/0:10,0:10:7.18:0,7,32	1/1:0,4:4:11.31:68,11,0	1/1:0,5:5:8.93:78,9,0	1/1:1,6:7:13.97:93,14,0	0/0:25,0:25:63.21:0,63,1001	0/0:38,0:37:99:0,102,1571	0/1:8,4:11:72.73:112,0,73	0/1:9,9:13:28.93:235,0,29	1/1:2,9:10:23.50:168,23,0	1/1:4,5:9:11.36:77,11,0	1/1:1,14:15:24.11:248,24,0	0/0:14,0:14:15.04:0,15,65	0/0:12,0:12:4.75:0,5,19	1/1:1,9:10:22.83:170,23,0	0/0:13,2:15:3.95:0,4,221	1/1:1,10:11:28.27:175,28,0	0/0:7,0:8:20.42:0,20,230
chr10	37752976	.	GAGAC	G	3710.35	PASS	AB=0.990;AC=38;AF=0.679;AN=56;BaseQRankSum=10.941;DP=518;FS=5.154;HRun=0;HaplotypeScore=189.4850;InbreedingCoeff=0.4960;MQ=56.65;MQ0=13;MQRankSum=-8.493;QD=10.54;ReadPosRankSum=-2.033;VQSLOD=2.8382;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:22:35.76:198,0,36	1/1:3,1:4:11.44:98,11,0	0/0:30,0:16:7.61:0,8,349	0/1:61,0:21:0.38:0,0,300	0/0:27,0:27:66.16:0,66,1479	0/1:15,1:15:37.58:185,0,38	0/1:13,0:12:37.56:38,0,80	1/1:18,0:18:41.86:392,42,0	0/0:27,0:27:72.11:0,72,1521	1/1:18,1:18:30.95:463,31,0	1/1:13,1:14:20.13:131,20,0	1/1:10,0:10:6.87:52,7,0	1/1:6,0:6:11.64:102,12,0	1/1:6,1:7:8.57:72,9,0	1/1:10,0:10:18.06:120,18,0	0/0:28,0:27:67.34:0,67,1433	0/0:41,0:40:99:0,102,2295	0/1:17,0:16:12.28:151,0,12	1/1:17,0:14:13.62:286,14,0	1/1:10,2:11:28.95:216,29,0	1/1:12,1:13:13.80:100,14,0	1/1:17,1:18:41.91:272,42,0	1/1:17,0:17:10.35:73,10,0	0/0:13,0:13:2.70:0,3,8	1/1:14,1:15:29.70:214,30,0	1/1:21,0:21:34.81:276,35,0	1/1:11,2:13:30.86:267,31,0	0/1:9,0:9:4.20:4,0,23
chr10	37752978	.	GAC	G	5325.56	PASS	AB=0.986;AC=41;AF=0.732;AN=56;BaseQRankSum=12.295;DP=523;FS=4.861;HRun=0;HaplotypeScore=171.0021;InbreedingCoeff=0.5042;MQ=57.94;MQ0=11;MQRankSum=-8.455;QD=14.32;ReadPosRankSum=-2.207;VQSLOD=4.3768;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:25:18.94:200,0,19	1/1:1,3:4:11.92:105,12,0	0/0:30,0:15:2.86:0,3,251	0/1:62,0:23:19.08:19,0,287	0/0:25,0:25:66.13:0,66,1069	1/1:15,1:15:28.34:198,28,0	0/1:12,1:12:13.88:52,0,14	1/1:12,6:18:50.88:496,51,0	0/0:28,0:28:75.06:0,75,1136	1/1:6,13:18:33.81:520,34,0	1/1:2,12:14:20.81:205,21,0	1/1:8,0:8:8.94:83,9,0	1/1:3,4:7:15.03:159,15,0	1/1:4,4:8:15.03:173,15,0	1/1:4,6:10:20.95:221,21,0	0/0:27,0:26:66.03:0,66,1046	0/0:41,0:40:99:0,102,1664	0/1:18,0:17:4.65:121,0,5	1/1:9,9:15:22.26:442,22,0	1/1:3,8:11:32.87:300,33,0	1/1:8,4:12:14.96:136,15,0	1/1:4,14:18:45.10:512,45,0	1/1:17,0:17:17.79:160,18,0	0/1:12,0:12:1.38:24,0,1	1/1:8,8:16:38.96:395,39,0	1/1:20,0:20:49.96:313,50,0	1/1:6,8:14:38.89:380,39,0	1/1:12,0:12:0.42:109,0,0
chr10	37753236	.	C	CT	807.33	PASS	AB=0.571;AC=39;AF=0.780;AN=50;BaseQRankSum=7.724;DP=185;FS=3.992;HRun=1;HaplotypeScore=36.2213;InbreedingCoeff=0.5966;MQ=37.59;MQ0=22;MQRankSum=-6.527;QD=6.96;ReadPosRankSum=-3.091;VQSLOD=-0.3752;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,0:5:8.85:58,9,0	1/1:3,0:3:5.91:39,6,0	./.	./.	0/0:20,0:20:48.09:0,48,630	1/1:7,0:3:8.83:55,9,0	1/1:8,0:5:11.83:78,12,0	1/1:11,0:7:20.88:159,21,0	0/0:10,0:9:27.09:0,27,377	1/1:5,0:4:8.76:56,9,0	1/1:9,0:7:5.87:40,6,0	./.	1/1:6,0:5:8.71:48,9,0	1/1:4,0:4:8.90:60,9,0	1/1:3,0:3:2.98:21,3,0	0/0:12,0:11:30.02:0,30,417	0/0:18,0:13:27.09:0,27,376	1/1:9,0:3:2.99:24,3,0	1/1:4,0:2:3.44:21,3,0	1/1:6,0:4:11.73:70,12,0	0/1:2,6:5:0:0,0,0	1/1:3,0:1:3:25,3,0	1/1:4,0:4:11.53:61,12,0	0/0:3,0:3:2.80:0,3,13	1/1:6,0:6:8.67:46,9,0	1/1:3,0:3:8.89:60,9,0	1/1:4,0:2:2.99:23,3,0	1/1:3,0:2:2.97:20,3,0
chr10	37753238	.	G	GGA	745.23	PASS	AC=36;AF=0.750;AN=48;BaseQRankSum=7.315;DP=184;FS=4.071;HRun=0;HaplotypeScore=38.5369;InbreedingCoeff=0.5954;MQ=36.61;MQ0=23;MQRankSum=-6.862;QD=7.76;ReadPosRankSum=-2.751;VQSLOD=1.7639;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,0:2:5.91:38,6,0	1/1:2,0:2:2.94:18,3,0	./.	0/0:5,0:1:2.96:0,3,19	0/0:20,0:20:45:0,45,575	1/1:7,0:3:8.85:56,9,0	1/1:8,0:5:11.85:79,12,0	1/1:3,0:7:20.86:154,21,0	0/0:13,0:12:26.88:0,27,430	1/1:3,0:3:8.17:49,8,0	1/1:2,6:6:3.01:47,3,0	./.	1/1:5,0:4:8.83:54,9,0	1/1:3,0:4:8.88:58,9,0	1/1:3,0:3:2.98:21,3,0	0/0:13,0:12:29.21:0,29,411	0/0:20,0:15:27.07:0,27,409	1/1:8,0:3:3:25,3,0	1/1:3,0:1:2.97:20,3,0	1/1:6,0:4:11.76:72,12,0	./.	./.	1/1:4,0:4:11.72:69,12,0	0/0:4,0:4:2.60:0,3,10	1/1:5,0:6:8.22:43,8,0	1/1:3,0:3:8.88:58,9,0	1/1:4,0:2:2.98:22,3,0	1/1:3,0:2:2.97:20,3,0
chr10	37753244	.	AAAGAAAAGAAAAG	A	798.21	PASS	AB=1.000;AC=29;AF=0.630;AN=46;BaseQRankSum=5.558;DP=173;FS=12.388;HRun=0;HaplotypeScore=50.3716;InbreedingCoeff=0.4652;MQ=37.30;MQ0=26;MQRankSum=-4.687;QD=9.50;ReadPosRankSum=0.917;VQSLOD=-0.0084;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:6,0:1:2.97:20,3,0	./.	0/1:6,0:3:10.37:10,0,154	0/0:7,0:1:3.01:0,3,181	0/0:18,0:18:39:0,39,1100	0/1:5,0:2:0:0,0,0	1/1:8,0:5:6.02:100,6,0	1/1:9,0:7:9.03:139,9,0	0/0:13,0:12:36.11:0,36,1097	1/1:3,0:3:3.01:108,3,0	1/1:4,0:2:3.01:56,3,0	./.	0/1:3,0:2:0:0,0,0	1/1:4,0:4:8.96:114,9,0	0/1:3,0:3:0.07:0,0,0	0/0:12,0:11:27.18:0,27,847	0/0:29,0:24:39.05:0,39,1225	1/1:8,0:2:5.05:51,5,0	0/1:3,0:1:0:0,0,0	1/1:4,0:2:5.92:39,6,0	./.	./.	./.	1/1:1,6:7:6.01:143,6,0	1/1:3,0:3:3.01:108,3,0	0/1:1,0:1:0:0,0,0	0/1:4,0:2:0:0,0,0	1/1:3,0:2:3.01:42,3,0
chr10	37753382	.	CG	C	11444.22	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=9.350;DP=407;FS=8.440;HRun=1;HaplotypeScore=66.2241;InbreedingCoeff=0.9865;MQ=71.20;MQ0=3;MQRankSum=-6.453;QD=37.04;ReadPosRankSum=2.990;VQSLOD=5.1684;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,18:18:42.14:586,42,0	1/1:0,6:6:15.05:209,15,0	0/0:15,0:12:36.12:0,36,556	0/0:14,0:13:38.34:0,38,582	0/0:13,0:13:33.11:0,33,527	1/1:0,15:15:42.14:587,42,0	1/1:0,19:19:57.19:796,57,0	1/1:0,18:18:48.08:628,48,0	0/0:10,0:10:24.08:0,24,378	1/1:0,9:9:27.09:378,27,0	1/1:1,14:14:27.09:377,27,0	1/1:0,14:14:39.13:545,39,0	1/1:0,8:7:15.05:209,15,0	1/1:0,7:7:21.07:293,21,0	1/1:0,11:11:27.09:377,27,0	0/0:11,0:11:30.10:0,30,479	0/0:35,0:35:99:0,102,1618	1/1:0,8:8:15.05:210,15,0	1/1:0,7:7:17.81:251,18,0	1/1:1,21:21:57.19:797,57,0	1/1:0,26:26:75.25:1049,75,0	1/1:1,19:20:57.19:786,57,0	1/1:0,13:13:33.11:462,33,0	1/1:0,16:16:48.16:670,48,0	1/1:0,14:14:39.13:545,39,0	1/1:1,13:14:39:515,39,0	1/1:0,17:17:51.17:712,51,0	1/1:0,12:12:33.11:461,33,0
chr10	37754027	.	TG	T	12169.27	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=6.108;DP=584;FS=8.145;HRun=6;HaplotypeScore=65.0215;InbreedingCoeff=0.9965;MQ=80.53;MQ0=0;MQRankSum=-4.447;QD=27.29;ReadPosRankSum=2.807;VQSLOD=5.4488;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,32:35:87.22:933,87,0	1/1:0,5:5:15.04:161,15,0	0/0:13,0:13:36.11:0,36,454	0/0:21,0:21:55.39:0,55,644	0/0:13,0:13:36.11:0,36,458	1/1:1,23:24:63.16:677,63,0	1/1:2,17:19:45.11:484,45,0	1/1:1,22:23:63.14:669,63,0	0/0:21,0:21:60.10:0,60,736	1/1:3,18:21:57.14:611,57,0	1/1:2,12:14:33:342,33,0	1/1:1,27:28:75.19:804,75,0	1/1:3,17:20:51.13:548,51,0	1/1:0,20:20:54.14:580,54,0	1/1:3,13:16:30.07:322,30,0	0/0:21,0:21:57.19:0,57,748	0/0:49,0:49:99:0,138,1816	1/1:1,17:18:51.13:548,51,0	1/1:2,11:13:33.06:345,33,0	1/1:2,18:20:48.12:515,48,0	1/1:3,20:23:48.12:516,48,0	1/1:1,14:15:42.11:451,42,0	1/1:2,13:15:39.10:418,39,0	1/1:3,28:31:78.20:838,78,0	1/1:0,19:19:45.11:482,45,0	1/1:2,27:29:81.18:860,81,0	1/1:2,21:23:57.14:613,57,0	1/1:1,14:15:42.11:451,42,0
chr10	37754033	.	GT	G	2411.48	PASS	AB=0.997;AC=34;AF=0.607;AN=56;BaseQRankSum=12.986;DP=584;FS=3.876;HRun=2;HaplotypeScore=96.1354;InbreedingCoeff=0.2628;MQ=81.12;MQ0=0;MQRankSum=-2.746;QD=5.38;ReadPosRankSum=6.914;VQSLOD=0.7614;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:37,1:38:30.94:183,0,31	1/1:5,0:5:9.52:29,10,0	0/0:14,0:14:36.06:0,36,458	0/0:20,0:20:59.81:0,60,761	0/0:14,0:14:42.10:0,42,554	0/1:25,0:25:9.33:150,0,9	1/1:18,0:18:8.99:80,9,0	0/1:26,0:26:65.67:66,0,80	0/0:20,0:20:57.12:0,57,803	1/1:18,2:20:10.82:142,11,0	1/1:12,0:12:20.64:71,21,0	1/1:27,0:27:58.10:285,58,0	0/1:23,0:23:64.20:64,0,101	1/1:20,0:20:39.53:160,40,0	0/1:14,0:14:16.52:55,0,17	0/0:21,0:21:63.12:0,63,859	0/0:47,0:47:99:0,141,2038	0/1:19,0:19:5.55:95,0,6	0/1:16,0:16:30.54:31,0,98	1/1:18,0:18:20.87:123,21,0	0/1:23,0:23:47.50:71,0,48	0/1:17,0:17:32.65:95,0,33	1/1:13,1:14:30.59:138,31,0	1/1:28,0:28:54.07:179,54,0	1/1:19,0:19:36.53:174,37,0	0/1:30,0:30:7.19:176,0,7	1/1:22,0:22:17.45:121,17,0	1/1:14,0:14:32.79:120,33,0
chr10	37754215	.	ACGAGCCCGCTGGAGCC	A	15797.40	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=9.875;DP=460;FS=2.660;HRun=0;HaplotypeScore=208.6099;InbreedingCoeff=0.8251;MQ=68.69;MQ0=0;MQRankSum=-10.552;QD=44.13;ReadPosRankSum=2.719;VQSLOD=4.3269;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:20,13:33:33.11:1018,33,0	1/1:7,0:7:2.98:22,3,0	0/0:8,0:8:12.04:0,12,629	0/0:17,0:17:30.10:0,30,1284	0/0:16,0:16:15.05:0,15,849	1/1:8,18:26:42.14:1700,42,0	1/1:5,2:7:3.01:133,3,0	1/1:15,0:15:3:27,3,0	0/0:19,0:19:48.16:0,48,3109	1/1:8,6:14:19.31:928,19,0	1/1:2,4:6:12.04:427,12,0	1/1:6,10:16:30.10:1330,30,0	1/1:8,8:16:21.07:931,21,0	1/1:8,10:18:27.09:1197,27,0	1/1:7,10:17:27.09:1136,27,0	0/0:11,0:11:18.06:0,18,1335	0/0:31,0:31:66.23:0,66,4822	1/1:10,5:15:12.04:472,12,0	1/1:13,5:18:15.02:554,15,0	1/1:4,9:13:24.08:766,24,0	1/1:23,9:32:0.47:2,0,0	1/1:11,3:14:9.03:356,9,0	1/1:8,9:17:21.07:826,21,0	1/1:8,7:15:12.51:533,13,0	1/1:2,9:11:21.07:913,21,0	1/1:8,8:16:20.98:930,21,0	1/1:11,8:19:21.07:931,21,0	1/1:4,9:13:15.05:665,15,0
chr10	37754228	.	AGCC	A	2224.55	PASS	AB=0.981;AC=21;AF=0.375;AN=56;BaseQRankSum=14.947;DP=380;FS=1.353;HRun=0;HaplotypeScore=134.5840;InbreedingCoeff=-0.4470;MQ=69.80;MQ0=0;MQRankSum=-12.539;QD=8.83;ReadPosRankSum=6.628;VQSLOD=2.5458;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:22:99:227,0,608	0/0:4,0:4:12.02:0,12,198	0/0:8,0:8:21.07:0,21,517	0/0:19,0:19:50.91:0,51,1144	0/0:9,0:9:27.09:0,27,612	0/1:24,0:24:99:310,0,383	0/1:5,0:5:7.19:7,0,160	0/1:10,3:13:84.99:85,0,603	0/0:18,0:18:54.19:0,54,1323	0/1:10,1:11:75.27:112,0,75	0/1:6,0:6:77.59:124,0,78	0/1:14,0:14:99:153,0,131	0/1:9,0:10:50.08:111,0,50	0/1:15,0:15:99:131,0,254	0/1:14,0:14:99:170,0,141	0/0:12,0:12:36.11:0,36,793	0/0:32,0:32:96.33:0,96,2282	0/1:12,0:12:78.17:78,0,364	0/1:13,0:13:40.99:41,0,455	0/1:12,0:12:99:138,0,153	0/0:26,0:26:19.77:0,20,394	0/1:9,0:9:67.02:67,0,319	0/1:12,0:12:99:172,0,119	0/1:12,0:12:36.49:61,0,36	0/1:11,0:11:99:111,0,120	0/1:14,0:14:96.57:97,0,330	0/1:14,0:14:98.57:99,0,238	1/1:9,0:9:14.78:96,15,0
chr10	37755921	.	G	GA	823.84	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=1.466;DP=487;FS=1.978;HRun=7;HaplotypeScore=191.7037;InbreedingCoeff=0.8408;MQ=71.73;MQ0=5;MQRankSum=-5.375;QD=15.26;ReadPosRankSum=-0.461;VQSLOD=1.5381;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:32.76:0,33,272	0/0:8,0:8:20.87:0,21,166	0/0:19,0:17:40.58:0,41,356	0/0:30,0:24:32.43:0,32,373	0/0:26,0:26:57.07:0,57,545	0/0:10,0:10:27:0,27,239	0/0:13,0:13:32.66:0,33,269	0/0:20,0:19:25.18:0,25,199	0/0:12,0:11:33.05:0,33,319	0/0:23,0:23:52.75:0,53,451	0/0:13,0:13:30.01:0,30,270	1/1:16,3:19:47:411,47,0	0/0:12,0:12:14.99:0,15,132	0/0:15,0:15:32.56:0,33,267	0/0:16,0:16:44.36:0,44,367	0/0:18,0:17:42.04:0,42,400	0/0:31,0:31:63.08:0,63,608	0/0:12,0:12:20.02:0,20,163	0/0:15,0:15:5.78:0,6,170	0/0:24,0:24:53:0,53,417	0/0:7,0:7:3:0,3,28	0/0:25,0:25:57.92:0,58,521	1/1:23,1:24:56.26:441,56,0	1/1:10,1:11:14.45:111,14,0	0/0:14,0:14:33.02:0,33,299	0/0:27,0:26:50.90:0,51,434	0/0:19,0:19:40.71:0,41,332	0/0:1,0:1:2.88:0,3,15
chr10	37755925	.	AAAAC	A	2135.61	PASS	AB=0.998;AC=24;AF=0.429;AN=56;BaseQRankSum=15.052;DP=468;FS=35.103;HRun=0;HaplotypeScore=203.7267;InbreedingCoeff=-0.1551;MQ=68.13;MQ0=5;MQRankSum=-12.627;QD=6.69;ReadPosRankSum=8.228;VQSLOD=1.2112;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:23:36.39:36,0,42	0/1:7,0:7:14.67:15,0,51	0/0:19,0:16:44.30:0,44,730	0/0:31,0:22:46.10:0,46,829	0/0:28,0:28:69.19:0,69,1452	0/1:10,0:10:17.85:18,0,41	0/1:13,0:13:20.83:21,0,84	0/1:17,0:16:1.74:2,0,155	0/0:14,0:13:39.13:0,39,921	0/1:20,0:20:29.63:30,0,89	0/1:13,0:13:11.31:11,0,88	1/1:7,10:17:48.61:705,49,0	1/1:14,0:14:9.39:29,9,0	0/1:13,0:13:23:23,0,46	0/1:16,0:16:35.74:36,0,68	0/0:18,0:17:51.14:0,51,1028	0/0:32,0:32:72.22:0,72,1711	0/1:10,0:10:8.32:20,0,8	0/1:12,0:12:3.42:3,0,88	0/1:24,0:24:31.37:31,0,91	0/0:6,0:6:3:0,3,28	0/1:23,1:24:68.54:69,0,99	1/1:6,16:22:58.08:936,58,0	1/1:6,4:10:15.05:234,15,0	0/1:13,0:13:20.48:20,0,62	0/1:25,0:25:33.71:34,0,73	0/1:16,0:16:36.17:36,0,49	0/0:1,0:1:3.01:0,3,34
chr10	37755928	.	AC	A	391.69	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=2.082;DP=436;FS=1.190;HRun=1;HaplotypeScore=182.5824;InbreedingCoeff=0.8418;MQ=66.92;MQ0=6;MQRankSum=-5.192;QD=8.90;ReadPosRankSum=-1.178;VQSLOD=0.6731;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:11.97:0,12,117	0/0:7,0:7:17.91:0,18,92	0/0:20,1:17:45.26:0,45,510	0/0:29,0:19:39.57:0,40,504	0/0:25,0:25:44.01:0,44,778	0/0:9,0:9:22.70:0,23,121	0/0:12,0:12:27.66:0,28,128	0/0:13,0:12:21.82:0,22,107	0/0:14,0:13:29.43:0,29,449	0/0:22,1:23:45.04:0,45,222	0/0:12,0:12:27.57:0,28,181	1/1:17,0:17:31.77:179,32,0	0/0:14,0:14:12.53:0,13,48	0/0:13,0:13:22.40:0,22,106	0/0:15,0:15:39.09:0,39,184	0/0:18,0:17:50.70:0,51,583	0/0:28,1:29:64.25:0,64,930	0/0:9,0:9:10.54:0,11,66	0/0:9,0:9:22.46:0,22,146	0/0:22,0:22:32.30:0,32,188	0/0:3,0:3:3.01:0,3,36	0/0:24,0:24:47.66:0,48,250	1/1:20,1:21:52.47:283,52,0	1/1:5,1:6:11.69:68,12,0	0/0:11,0:11:30.26:0,30,179	0/0:24,0:24:32.70:0,33,223	0/0:14,0:14:34.38:0,34,167	0/0:1,0:1:2.37:0,2,8
chr10	37755929	.	C	CAA	3543.15	PASS	AB=0.986;AC=38;AF=0.704;AN=54;BaseQRankSum=8.449;DP=436;FS=10.731;HRun=7;HaplotypeScore=180.2889;InbreedingCoeff=0.6066;MQ=66.67;MQ0=6;MQRankSum=-9.841;QD=11.97;ReadPosRankSum=3.113;VQSLOD=-0.0674;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:20,2:22:4.67:111,5,0	1/1:7,0:7:12.87:122,13,0	0/0:23,0:17:16.81:0,17,403	0/0:30,0:19:47.13:0,47,475	0/0:24,0:24:62.08:0,62,749	1/1:9,0:9:15.06:73,15,0	1/1:11,1:12:20.01:175,20,0	1/1:8,4:11:30.07:412,30,0	0/0:14,0:13:38.96:0,39,485	1/1:20,2:22:43.84:371,44,0	1/1:12,0:12:18.35:120,18,0	0/1:16,1:17:23.37:90,0,23	1/1:14,0:14:10.27:50,10,0	1/1:13,0:13:24.66:203,25,0	1/1:13,2:15:26.58:179,27,0	0/0:17,0:16:44.17:0,44,521	0/0:29,0:29:80.91:0,81,971	1/1:8,0:8:15.14:105,15,0	0/1:8,0:8:17.89:32,0,18	1/1:21,1:22:41.34:374,41,0	./.	1/1:21,3:24:44.90:458,45,0	0/1:21,0:21:34.43:78,0,34	0/1:7,0:7:2.36:24,0,2	1/1:11,0:11:15.72:62,16,0	1/1:25,0:25:38.80:315,39,0	1/1:12,1:14:14.58:136,15,0	1/1:1,0:1:3.01:54,3,0
chr10	37755931	.	AAAC	A	8047.46	PASS	AB=0.727;AC=41;AF=0.759;AN=54;BaseQRankSum=13.067;DP=457;FS=8.917;HRun=0;HaplotypeScore=176.3035;InbreedingCoeff=0.8650;MQ=65.63;MQ0=7;MQRankSum=-11.568;QD=25.79;ReadPosRankSum=4.315;VQSLOD=4.2055;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:25:32.27:313,32,0	1/1:3,4:7:18.05:221,18,0	0/0:23,0:17:39.94:0,40,596	0/0:33,0:19:43.90:0,44,691	0/0:25,0:25:66.17:0,66,1260	1/1:3,6:9:21.07:284,21,0	1/1:5,8:13:29.12:363,29,0	1/1:8,3:10:30.08:397,30,0	0/0:14,0:13:39.13:0,39,789	1/1:10,13:23:57.14:701,57,0	1/1:3,9:12:24.54:300,25,0	1/1:19,0:19:36.56:271,37,0	1/1:11,4:15:16.87:204,17,0	1/1:5,9:14:37.84:447,38,0	1/1:4,10:14:39.12:488,39,0	0/0:16,0:15:45.13:0,45,877	0/0:29,0:29:81.19:0,81,1541	1/1:3,5:8:18.06:252,18,0	0/1:5,3:8:44.95:159,0,45	1/1:7,15:22:54.74:677,55,0	./.	1/1:8,16:24:66.20:860,66,0	1/1:22,0:22:52.48:459,52,0	1/1:8,0:8:10.29:123,10,0	1/1:2,8:10:24.08:312,24,0	1/1:21,9:30:54.12:698,54,0	1/1:6,10:16:41.95:468,42,0	1/1:2,0:2:5.97:50,6,0
chr10	37755933	.	ACAAAACAAC	A	19655.04	PASS	AB=0.778;AC=41;AF=0.759;AN=54;BaseQRankSum=11.628;DP=449;FS=6.829;HRun=0;HaplotypeScore=179.2725;InbreedingCoeff=0.8800;MQ=65.96;MQ0=9;MQRankSum=-12.188;QD=65.52;ReadPosRankSum=3.059;VQSLOD=4.4240;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,24:26:33.11:991,33,0	1/1:5,1:6:18.06:520,18,0	0/0:27,0:17:39.42:0,39,741	0/0:30,0:18:42.17:0,42,1101	0/0:24,0:24:66.21:0,66,2550	1/1:7,1:8:24.08:668,24,0	1/1:11,0:11:33.09:819,33,0	1/1:7,4:10:30.10:709,30,0	0/0:15,0:14:42.14:0,42,1579	1/1:24,0:24:69.21:1721,69,0	1/1:12,0:12:30.09:708,30,0	1/1:16,0:16:41.80:889,42,0	1/1:5,10:15:18.05:503,18,0	1/1:13,1:15:45.13:992,45,0	1/1:13,1:14:42.14:1221,42,0	0/0:16,0:15:45.13:0,45,1669	0/0:30,0:30:84.25:0,84,3064	1/1:5,1:6:18.06:525,18,0	0/1:5,2:7:93.01:393,0,93	1/1:18,3:21:63.20:1526,63,0	./.	1/1:22,2:24:72.25:1930,72,0	1/1:19,0:19:54.19:1324,54,0	1/1:8,0:8:15.04:353,15,0	1/1:9,0:9:27.09:840,27,0	1/1:11,15:28:71.97:1709,72,0	1/1:16,0:16:42.14:1124,42,0	1/1:3,0:3:9.03:193,9,0
chr10	37755938	.	AC	A	3047.86	PASS	AB=1.000;AC=43;AF=0.768;AN=56;BaseQRankSum=13.165;DP=474;FS=4.667;HRun=1;HaplotypeScore=183.1228;InbreedingCoeff=0.8634;MQ=59.50;MQ0=9;MQRankSum=-10.587;QD=9.04;ReadPosRankSum=2.222;VQSLOD=1.5246;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:24,1:26:28.14:142,28,0	1/1:10,0:10:22.91:92,23,0	0/0:26,0:15:27.85:0,28,276	0/0:30,0:16:27.61:0,28,458	0/0:26,0:26:69.04:0,69,915	1/1:10,0:10:23.69:105,24,0	1/1:14,0:14:28.62:129,29,0	1/1:13,0:12:19.85:93,20,0	0/0:14,0:13:39.13:0,39,564	1/1:18,0:24:47.41:204,47,0	1/1:12,0:12:20.48:82,20,0	1/1:6,9:16:32.98:251,33,0	1/1:16,0:16:16.88:70,17,0	1/1:15,0:15:37.78:183,38,0	1/1:15,0:15:33.41:137,33,0	0/0:13,0:12:36.10:0,36,516	0/0:27,0:27:75.06:0,75,1083	1/1:8,0:8:19.10:98,19,0	0/1:16,0:16:11.86:134,0,12	1/1:20,0:20:49.78:256,50,0	1/1:7,0:6:5.93:40,6,0	1/1:24,0:24:48.85:204,49,0	1/1:2,16:19:49.52:410,50,0	1/1:4,2:7:13.72:117,14,0	1/1:10,0:10:24.49:97,24,0	1/1:30,1:30:54.69:230,55,0	1/1:19,0:19:26.61:126,27,0	1/1:4,0:4:8.07:40,8,0
chr10	37755939	.	CAACAACAAA	C	12354.53	PASS	AB=0.931;AC=42;AF=0.750;AN=56;BaseQRankSum=12.947;DP=487;FS=6.839;HRun=0;HaplotypeScore=219.3670;InbreedingCoeff=0.6638;MQ=56.83;MQ0=10;MQRankSum=-10.200;QD=33.03;ReadPosRankSum=3.552;VQSLOD=3.5811;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:26:32.87:361,33,0	1/1:6,3:10:25.83:412,26,0	0/1:28,0:16:3.72:4,0,330	0/0:32,0:15:35.60:0,36,594	0/0:26,0:26:72.19:0,72,2253	1/1:4,5:10:29.99:537,30,0	1/1:6,6:14:38.37:630,38,0	0/1:11,2:12:6.56:261,0,7	0/0:14,0:13:39.09:0,39,1148	1/1:11,12:24:51.57:1184,52,0	1/1:4,7:12:29.94:521,30,0	1/1:17,0:17:22.58:346,23,0	1/1:12,4:16:20.94:392,21,0	1/1:8,8:16:46.25:693,46,0	1/1:5,8:15:42.09:851,42,0	0/0:14,0:13:36.12:0,36,1352	0/0:27,0:27:75.25:0,75,2494	1/1:6,3:9:23.51:365,24,0	0/1:15,3:18:71.71:495,0,72	1/1:7,13:20:57.07:1006,57,0	1/1:8,0:7:7.72:59,8,0	1/1:8,15:23:66.10:1306,66,0	1/1:19,0:19:49.86:646,50,0	1/1:8,0:7:9.69:164,10,0	1/1:3,8:11:30.83:694,31,0	1/1:22,1:30:22.79:528,23,0	1/1:12,10:22:43.12:890,43,0	0/1:4,0:4:7.73:10,0,8
chr10	37755941	.	AC	A	3054.46	PASS	AB=1.000;AC=42;AF=0.750;AN=56;BaseQRankSum=13.397;DP=477;FS=2.002;HRun=1;HaplotypeScore=181.7731;InbreedingCoeff=0.7228;MQ=54.84;MQ0=10;MQRankSum=-9.917;QD=8.98;ReadPosRankSum=2.994;VQSLOD=1.4645;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:26:31.02:159,31,0	1/1:9,0:9:18.97:91,19,0	0/0:25,1:14:1.21:0,1,211	0/0:28,2:14:21.84:0,22,367	0/0:27,0:27:68.98:0,69,987	1/1:11,0:11:22.47:89,22,0	1/1:13,1:14:27.21:127,27,0	0/1:14,0:13:10.60:70,0,11	0/0:14,0:13:39.08:0,39,558	1/1:22,0:22:29.07:205,29,0	1/1:11,0:11:16.26:73,16,0	1/1:10,7:17:41.10:321,41,0	1/1:15,1:16:17.32:78,17,0	1/1:16,1:17:38.89:211,39,0	1/1:14,0:14:32.84:137,33,0	0/0:13,0:12:36.10:0,36,525	0/0:26,0:26:66.98:0,67,1046	1/1:9,0:9:20.67:134,21,0	0/1:18,0:18:38.32:38,0,48	1/1:18,1:19:32.52:184,33,0	1/1:8,0:7:2.97:8,3,0	1/1:20,0:20:50.81:238,51,0	1/1:17,2:19:49.44:317,49,0	1/1:6,2:7:16.31:113,16,0	1/1:12,0:12:27.93:126,28,0	1/1:31,0:30:62.14:313,62,0	1/1:21,1:22:41.11:189,41,0	1/1:3,0:3:6.12:21,6,0
chr10	37755942	.	CAACAA	C	5220.12	PASS	AB=1.000;AC=39;AF=0.696;AN=56;BaseQRankSum=14.404;DP=494;FS=6.435;HRun=0;HaplotypeScore=208.2055;InbreedingCoeff=0.6571;MQ=54.77;MQ0=10;MQRankSum=-8.195;QD=15.04;ReadPosRankSum=6.851;VQSLOD=3.3812;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:26:2.88:58,3,0	1/1:9,0:9:18.12:156,18,0	0/0:29,0:15:26.30:0,26,221	0/0:30,0:13:27.69:0,28,324	0/0:29,0:29:78.14:0,78,1474	1/1:12,0:12:18.62:201,19,0	1/1:16,0:16:9.82:205,10,0	0/1:16,0:15:28.06:102,0,28	0/0:11,0:11:33.06:0,33,621	1/1:22,0:22:7.38:383,7,0	0/1:11,0:11:0.76:177,0,1	1/1:8,7:17:37.44:441,37,0	1/1:16,0:16:7.85:136,8,0	1/1:17,0:17:10.92:222,11,0	1/1:18,0:18:31.45:349,31,0	0/0:12,0:12:36.09:0,36,791	0/0:26,0:26:74.98:0,75,1428	1/1:12,0:12:18.03:171,18,0	0/1:20,0:20:81.93:99,0,82	1/1:19,0:19:7.12:304,7,0	0/0:8,0:7:4.74:0,5,14	1/1:19,1:20:46.52:490,47,0	1/1:3,14:19:51.07:676,51,0	1/1:6,2:7:14.85:140,15,0	1/1:12,0:12:19.94:252,20,0	1/1:32,0:31:29.07:297,29,0	1/1:22,0:22:38.98:355,39,0	1/1:3,0:3:2.58:7,3,0
chr10	37755944	.	AC	A	3943.31	PASS	AB=1.000;AC=43;AF=0.768;AN=56;BaseQRankSum=11.261;DP=513;FS=2.027;HRun=1;HaplotypeScore=184.2739;InbreedingCoeff=0.8538;MQ=52.49;MQ0=11;MQRankSum=-9.320;QD=10.89;ReadPosRankSum=1.247;VQSLOD=2.0161;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:25:8.52:12,0,9	1/1:9,0:9:23.21:120,23,0	0/0:27,3:13:4.70:0,5,109	0/0:30,1:13:16.82:0,17,180	0/0:32,0:32:28.84:0,29,553	1/1:12,0:12:27.17:124,27,0	1/1:15,1:16:35.58:170,36,0	1/1:16,0:15:35.66:198,36,0	0/0:14,0:13:36.60:0,37,281	1/1:21,0:21:53.62:260,54,0	1/1:11,0:11:25.97:109,26,0	1/1:17,0:17:40.90:320,41,0	1/1:15,1:16:21.90:112,22,0	1/1:16,1:17:45.88:262,46,0	1/1:19,0:19:34.71:154,35,0	0/0:16,0:15:31.71:0,32,285	0/0:28,0:28:52.81:0,53,542	1/1:13,0:13:22.65:147,23,0	1/1:21,0:21:21.20:189,21,0	1/1:20,0:20:52.39:259,52,0	1/1:8,0:7:10.05:41,10,0	1/1:21,0:21:56.32:276,56,0	1/1:21,0:21:55.32:359,55,0	1/1:8,0:7:15.30:111,15,0	1/1:12,1:13:33.03:178,33,0	1/1:31,1:31:43.42:257,43,0	1/1:23,0:23:51.98:265,52,0	1/1:3,0:3:5.88:20,6,0
chr10	37755948	.	A	AC	2509.69	PASS	AB=0.775;AC=28;AF=0.500;AN=56;BaseQRankSum=4.734;DP=541;FS=14.288;HRun=0;HaplotypeScore=194.0832;InbreedingCoeff=0.4164;MQ=49.95;MQ0=12;MQRankSum=-7.349;QD=7.87;ReadPosRankSum=2.652;VQSLOD=2.7935;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:33.69:0,34,242	0/1:6,5:11:2.54:106,0,3	0/0:39,0:15:22.12:0,22,225	0/0:26,0:8:20.62:0,21,180	0/0:30,0:30:79.29:0,79,866	1/1:8,6:14:12.52:134,13,0	1/1:9,7:17:16.19:209,16,0	0/1:14,5:19:23.01:148,0,23	0/0:13,0:12:31.80:0,32,320	1/1:20,1:21:27.97:236,28,0	1/1:9,3:12:16.32:164,16,0	0/1:18,0:18:1.25:1,0,130	1/1:14,1:15:6.16:73,6,0	1/1:15,2:17:2.92:164,3,0	0/1:11,8:19:5.88:93,0,6	0/0:15,0:14:34.28:0,34,421	0/0:27,0:27:71.19:0,71,751	0/1:7,7:14:13.48:82,0,13	0/1:10,11:22:7.80:334,0,8	1/1:19,3:22:18.25:290,18,0	1/1:3,5:8:4.76:101,5,0	1/1:18,4:22:28.45:223,28,0	0/1:26,0:26:30.38:30,0,187	0/0:10,0:9:14.41:0,14,75	1/1:11,3:14:5.93:111,6,0	0/0:35,0:34:47.70:0,48,337	0/1:16,8:26:12.46:201,0,12	0/0:3,0:3:4.52:0,5,13
chr10	37756461	.	A	ATGTGTGTGTGTGTGTG	13085.49	PASS	AC=40;AF=0.769;AN=52;BaseQRankSum=4.200;DP=651;FS=4.122;HRun=0;HaplotypeScore=288.3437;InbreedingCoeff=0.7355;MQ=58.42;MQ0=9;MQRankSum=-7.597;QD=28.39;ReadPosRankSum=-2.633;VQSLOD=3.1254;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:31,0:30:7.79:300,8,0	1/1:8,0:8:3.01:47,3,0	0/0:27,0:16:3:0,3,28	0/0:34,0:21:2.61:0,3,105	0/0:19,0:23:51.16:0,51,1869	1/1:21,0:23:21.07:651,21,0	1/1:32,0:33:24.86:894,25,0	1/1:30,0:29:36.10:968,36,0	0/0:23,0:27:57.14:0,57,1773	1/1:31,0:29:52.29:1459,52,0	./.	1/1:17,11:28:9.03:663,9,0	1/1:16,0:17:21.03:939,21,0	1/1:27,0:29:18.05:756,18,0	1/1:24,0:23:6.02:149,6,0	0/0:21,0:25:51.15:0,51,1547	0/0:31,0:31:57.16:0,57,1924	1/1:19,0:20:21.86:882,22,0	1/1:21,0:18:32.68:757,33,0	1/1:13,0:13:5.80:64,6,0	1/1:27,0:27:4.31:119,4,0	1/1:12,0:14:6.02:345,6,0	./.	1/1:27,1:39:10.70:853,11,0	1/1:12,0:15:8.09:407,8,0	1/1:30,0:27:48.16:1991,48,0	1/1:20,0:20:30.10:757,30,0	1/1:7,0:7:6.02:85,6,0
chr10	37756496	.	C	CGT	2936.97	PASS	AB=1.000;AC=33;AF=0.635;AN=52;BaseQRankSum=4.157;DP=514;FS=10.753;HRun=0;HaplotypeScore=120.6828;InbreedingCoeff=0.4078;MQ=67.55;MQ0=2;MQRankSum=-2.364;QD=9.44;ReadPosRankSum=-1.819;VQSLOD=2.6231;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:24:24.07:24,0,102	1/1:6,0:6:5.99:50,6,0	0/0:24,0:15:42.10:0,42,594	0/0:20,0:16:39.12:0,39,545	0/0:32,0:32:93.23:0,93,1328	1/1:4,10:14:6.02:105,6,0	1/1:5,21:26:2.71:57,3,0	1/1:4,26:31:54.08:853,54,0	0/0:22,0:22:57.16:0,57,823	1/1:9,19:27:33.30:806,33,0	./.	0/1:11,0:11:8.18:19,0,8	1/1:1,15:17:6.02:86,6,0	1/1:3,16:20:6.02:102,6,0	./.	0/0:16,0:15:42:0,42,542	0/0:28,0:28:81.28:0,81,1237	1/1:8,3:11:20.93:256,21,0	1/1:2,6:7:17.81:211,18,0	1/1:1,13:14:3.01:37,3,0	1/1:6,16:22:2.92:17,3,0	1/1:1,12:13:6.02:94,6,0	0/1:16,0:16:15.95:16,0,106	0/0:37,0:37:8:0,8,155	1/1:0,7:7:11.71:170,12,0	0/1:18,0:18:13.45:13,0,136	1/1:4,12:16:1.23:173,1,0	0/1:6,0:6:26.88:27,0,43
chr10	37757362	.	T	TA	1217.69	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-7.992;DP=673;FS=5.090;HRun=8;HaplotypeScore=65.2907;InbreedingCoeff=0.9985;MQ=80.02;MQ0=0;MQRankSum=-4.022;QD=26.47;ReadPosRankSum=2.159;VQSLOD=4.6142;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,42:46:99:1313,114,0	0/0:14,0:14:27:0,27,247	0/0:21,0:21:38.37:0,38,429	0/0:14,0:14:38.96:0,39,346	0/0:27,0:27:75.03:0,75,682	0/0:15,0:15:45.02:0,45,412	0/0:26,0:26:65.99:0,66,590	0/0:33,0:33:86.98:0,87,779	0/0:24,0:24:56.99:0,57,513	0/0:28,0:27:75.03:0,75,686	0/0:20,0:20:45.01:0,45,412	0/0:23,0:23:60.02:0,60,546	0/0:14,0:14:36.02:0,36,329	0/0:21,0:21:57.02:0,57,522	0/0:26,0:26:72.03:0,72,659	0/0:22,0:22:63.03:0,63,576	0/0:25,0:25:60.01:0,60,549	0/0:18,0:18:48.02:0,48,439	0/0:25,0:25:63.02:0,63,573	0/0:25,0:25:72.03:0,72,659	0/0:18,0:19:53.02:0,53,462	0/0:27,0:27:72.02:0,72,656	0/0:28,0:28:59.69:0,60,529	0/0:31,0:32:80.07:0,80,720	0/0:18,0:18:53.06:0,53,472	0/0:38,0:38:99:0,99,896	0/0:31,0:31:75.03:0,75,686	0/0:12,0:12:35.99:0,36,323
chr10	37757997	.	A	AT	6515.22	PASS	AB=1.000;AC=33;AF=0.589;AN=56;BaseQRankSum=-11.234;DP=495;FS=2.072;HRun=9;HaplotypeScore=51.0069;InbreedingCoeff=0.9191;MQ=85.01;MQ0=0;MQRankSum=-0.971;QD=24.13;ReadPosRankSum=-1.850;VQSLOD=4.9692;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:68.96:0,69,594	1/1:0,8:8:21.06:232,21,0	0/0:21,0:21:41.34:0,41,345	0/1:18,0:18:32.31:32,0,198	0/0:25,0:25:62.95:0,63,543	1/1:4,18:21:22.10:472,22,0	1/1:0,11:11:33.09:365,33,0	1/1:5,14:19:36.10:398,36,0	0/0:18,0:18:53.99:0,54,469	1/1:3,19:22:31.12:571,31,0	1/1:3,9:12:21.02:219,21,0	0/0:11,0:11:32.99:0,33,286	1/1:1,6:8:14.85:165,15,0	1/1:1,7:8:18.05:199,18,0	1/1:1,17:18:45.12:498,45,0	0/0:11,0:11:29.98:0,30,257	0/0:26,0:26:74.98:0,75,651	1/1:1,13:14:39.11:431,39,0	1/1:4,16:20:25:471,25,0	1/1:1,22:23:60.16:664,60,0	1/1:1,13:14:36.10:398,36,0	1/1:1,11:12:30.08:332,30,0	0/0:25,0:25:62.98:0,63,547	0/0:27,0:27:68.95:0,69,593	1/1:4,17:21:28.09:538,28,0	0/0:24,2:26:23.81:0,24,436	1/1:3,17:20:48.13:530,48,0	0/0:7,0:7:17.96:0,18,150
chr10	37758136	.	G	GTC	1071.69	PASS	AB=0.561;AC=3;AF=0.054;AN=56;BaseQRankSum=6.565;DP=518;FS=9.364;HRun=0;HaplotypeScore=78.0347;InbreedingCoeff=0.6525;MQ=73.18;MQ0=2;MQRankSum=-0.454;QD=27.48;ReadPosRankSum=0.346;VQSLOD=4.7066;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:59.44:0,59,675	0/0:10,0:9:20.52:0,21,192	0/0:27,0:21:23.43:0,23,255	0/0:37,0:28:21.76:0,22,366	0/0:16,0:16:30.03:0,30,347	0/0:19,0:19:42.13:0,42,509	0/0:21,0:21:51.15:0,51,611	0/0:23,0:23:54.12:0,54,631	0/0:24,0:24:51.15:0,51,613	0/0:20,0:20:45.13:0,45,539	0/0:14,0:14:39.12:0,39,476	0/0:17,0:17:45.05:0,45,515	0/0:12,0:12:18.06:0,18,220	0/0:13,0:13:36.11:0,36,440	0/0:8,0:8:21.07:0,21,256	0/0:19,0:20:44.93:0,45,510	0/0:33,0:35:74.85:0,75,852	0/0:17,0:17:45.13:0,45,539	0/0:14,0:15:29.92:0,30,343	0/0:22,0:22:45.11:0,45,525	0/0:16,0:16:39.12:0,39,474	0/0:21,0:20:48.06:0,48,545	0/0:15,0:16:31.96:0,32,350	0/0:11,0:12:22.44:0,22,227	0/0:10,0:10:21.54:0,22,258	0/1:5,18:22:13.41:740,0,13	0/0:13,0:13:33.10:0,33,403	1/1:5,11:16:27.09:437,27,0
chr10	37758287	.	TGTGTGTGTGTGCGCGC	T	1037.52	PASS	AB=0.981;AC=9;AF=0.161;AN=56;BaseQRankSum=5.328;DP=574;FS=1.755;HRun=0;HaplotypeScore=229.0678;InbreedingCoeff=0.0446;MQ=51.85;MQ0=14;MQRankSum=-5.214;QD=5.21;ReadPosRankSum=-2.754;VQSLOD=2.1888;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:39,0:37:99:117,0,1827	0/0:7,0:7:11.66:0,12,456	0/1:23,0:5:49.04:49,0,83	0/1:23,0:6:15.83:16,0,101	0/0:14,0:13:30.10:0,30,1460	0/0:19,0:19:27.08:0,27,1374	0/0:17,0:17:48.16:0,48,1923	0/0:21,0:21:62.58:0,63,1776	0/0:37,0:37:93.74:0,94,4707	0/0:22,0:22:63.20:0,63,2119	0/0:6,0:6:15.04:0,15,462	0/1:25,1:26:13.82:492,0,14	0/0:17,0:17:35.18:0,35,1773	0/0:25,0:25:51.09:0,51,2355	0/0:13,0:12:15.41:0,15,660	0/0:22,0:22:48.14:0,48,2849	0/0:39,0:39:99:0,108,5715	0/1:34,0:34:27.74:28,0,2301	0/0:17,0:16:48.04:0,48,1178	0/0:10,0:10:27.09:0,27,1256	0/0:42,0:40:54.08:0,54,2060	0/0:16,0:15:23.77:0,24,672	1/1:12,2:13:6.01:95,6,0	0/1:19,1:18:13.86:286,0,14	0/0:7,0:7:10.28:0,10,592	0/1:19,0:18:93.92:94,0,300	0/0:20,0:20:46.16:0,46,1954	0/0:4,0:4:2.04:0,2,6
chr10	37758289	.	TGTGTGTGTGCGCGC	T	1569.91	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=4.686;DP=565;FS=2.358;HRun=0;HaplotypeScore=209.9787;InbreedingCoeff=0.4069;MQ=52.00;MQ0=14;MQRankSum=-5.036;QD=7.97;ReadPosRankSum=-2.063;VQSLOD=2.3266;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:35,0:35:74.86:75,0,1586	0/0:7,0:7:11.67:0,12,402	0/1:23,0:5:49.04:49,0,83	0/1:22,0:6:13.78:14,0,97	0/0:13,0:12:30.08:0,30,1310	0/0:19,0:19:27.08:0,27,1243	0/0:17,0:17:45.61:0,46,1699	0/0:20,0:20:60.20:0,60,1526	0/0:36,0:36:87.76:0,88,4262	0/0:20,0:20:57.18:0,57,1793	0/0:7,0:7:15.05:0,15,440	1/1:17,8:25:27.69:822,28,0	0/0:16,0:16:31.93:0,32,1598	0/0:25,0:25:51.10:0,51,2137	0/0:13,0:12:14.74:0,15,606	0/0:21,0:21:42.14:0,42,2504	0/0:39,0:39:99:0,111,5261	0/1:32,0:33:24.52:25,0,2010	0/0:18,0:17:50.25:0,50,1131	0/0:12,0:12:33.11:0,33,1225	0/0:42,0:40:53.94:0,54,1904	0/0:15,0:14:20.78:0,21,596	1/1:12,2:13:6.02:138,6,0	1/1:17,3:18:10.28:372,10,0	0/0:8,0:8:13.29:0,13,588	0/1:19,0:17:94.84:218,0,95	0/0:20,0:20:42.82:0,43,1764	1/1:4,0:4:2.97:20,3,0
chr10	37758291	.	TGTGTGTGCGC	T	1359.76	PASS	AB=1.000;AC=12;AF=0.214;AN=56;BaseQRankSum=5.315;DP=553;FS=0.000;HRun=0;HaplotypeScore=175.8883;InbreedingCoeff=0.6537;MQ=52.06;MQ0=14;MQRankSum=-5.396;QD=9.85;ReadPosRankSum=-0.659;VQSLOD=2.5479;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:36,0:34:28.34:28,0,910	0/0:7,0:7:11.22:0,11,307	0/1:23,0:5:17.97:18,0,61	0/0:21,0:7:4.71:0,5,69	0/0:12,0:11:27.09:0,27,964	0/0:17,0:17:24.08:0,24,889	0/0:19,0:19:50.94:0,51,1386	0/0:21,0:21:60.18:0,60,1136	0/0:34,0:34:87.77:0,88,3208	0/0:19,0:19:51.16:0,51,1299	0/0:6,0:6:15.05:0,15,355	1/1:23,0:23:20.30:400,20,0	0/0:16,0:16:31.81:0,32,1198	0/0:24,0:24:51:0,51,1572	0/0:13,0:12:14.72:0,15,460	0/0:20,0:20:42.13:0,42,1842	0/0:38,0:38:99:0,111,3902	0/0:31,0:31:8.38:0,8,1454	0/0:17,0:16:39.06:0,39,779	0/0:13,0:13:36.03:0,36,871	0/0:43,0:41:57.47:0,57,1354	0/0:15,0:14:23.78:0,24,483	1/1:14,0:13:5.85:88,6,0	1/1:19,0:17:8.12:198,8,0	0/0:9,0:9:12.72:0,13,444	1/1:16,3:17:38.62:689,39,0	0/0:19,0:19:42.90:0,43,1341	1/1:0,4:4:3.01:101,3,0
chr10	37758297	.	TGCGCGC	T	930.65	PASS	AB=0.983;AC=13;AF=0.232;AN=56;BaseQRankSum=6.526;DP=519;FS=1.498;HRun=0;HaplotypeScore=142.6787;InbreedingCoeff=0.6178;MQ=54.14;MQ0=7;MQRankSum=-5.241;QD=6.46;ReadPosRankSum=-0.604;VQSLOD=2.7381;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:36,0:37:7.03:7,0,1162	0/0:6,0:6:8.49:0,8,172	0/1:22,0:8:68.72:69,0,173	0/1:18,0:7:15.92:16,0,150	0/0:12,0:11:21.07:0,21,632	0/0:16,0:16:19.95:0,20,618	0/0:18,0:18:50.20:0,50,1249	0/0:19,0:19:45.15:0,45,1085	0/0:34,0:34:86.96:0,87,2310	0/0:14,0:14:33.11:0,33,857	0/0:5,0:5:15.05:0,15,341	1/1:11,7:18:18.53:337,19,0	0/0:15,0:16:32.80:0,33,879	0/0:22,0:23:50.96:0,51,1314	0/0:13,0:12:15:0,15,390	0/0:18,0:18:36.12:0,36,1167	0/0:38,0:38:99:0,108,3028	0/0:26,0:27:46.04:0,46,1155	0/0:16,0:16:45.02:0,45,904	0/0:14,0:14:39.13:0,39,942	0/0:44,0:43:64.82:0,65,1534	0/0:16,0:15:26.79:0,27,580	1/1:9,4:12:6.02:138,6,0	1/1:13,4:16:9.48:149,9,0	0/0:9,0:9:16.30:0,16,373	1/1:14,0:13:36.39:343,36,0	0/0:16,0:17:38.35:0,38,862	1/1:4,0:4:3.01:40,3,0
chr10	37758355	.	A	AGT	1427.89	PASS	AB=0.782;AC=6;AF=0.107;AN=56;BaseQRankSum=10.188;DP=630;FS=1.190;HRun=0;HaplotypeScore=125.8844;InbreedingCoeff=0.2078;MQ=67.83;MQ0=1;MQRankSum=-9.242;QD=15.35;ReadPosRankSum=-0.212;VQSLOD=3.5529;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:38:99:0,99,1265	0/0:5,0:5:15.05:0,15,195	0/0:28,0:22:2.07:0,2,483	0/0:51,0:39:45.94:0,46,760	0/0:12,0:12:33.11:0,33,429	0/0:14,0:14:39.13:0,39,505	0/0:31,0:31:90.29:0,90,1170	0/0:39,0:40:82.32:0,82,1089	0/0:29,0:29:81.26:0,81,1052	0/0:20,0:20:54.17:0,54,701	0/0:12,0:12:30.08:0,30,376	0/1:14,6:20:99:495,0,111	0/0:12,0:12:36.12:0,36,468	0/0:19,0:19:51.15:0,51,648	0/0:17,0:17:11.17:0,11,547	0/0:16,0:16:42.14:0,42,545	0/0:28,0:28:84.27:0,84,1092	0/0:18,0:19:48.12:0,48,604	0/0:19,0:19:51.15:0,51,638	0/0:21,0:21:42.14:0,42,546	0/0:63,0:63:99:0,160,2067	0/0:20,0:20:45.15:0,45,585	0/1:11,7:18:75.03:485,0,75	0/1:21,7:29:99:273,0,185	0/0:16,0:16:48.16:0,48,624	0/1:15,0:19:99:194,0,117	0/0:7,0:7:17.95:0,18,234	1/1:5,0:6:14.88:109,15,0
chr10	37758364	.	GAA	G	563.25	PASS	AB=0.754;AC=5;AF=0.089;AN=56;BaseQRankSum=9.062;DP=624;FS=1.363;HRun=2;HaplotypeScore=122.6565;InbreedingCoeff=0.0724;MQ=64.24;MQ0=1;MQRankSum=-6.326;QD=6.95;ReadPosRankSum=-2.110;VQSLOD=-0.3862;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,114,2139	0/0:6,0:6:18.06:0,18,341	0/0:32,0:26:37.53:0,38,1160	0/0:47,0:34:44.82:0,45,1333	0/0:12,0:12:33.11:0,33,671	0/0:15,0:15:45.11:0,45,841	0/0:35,0:35:99:0,105,2055	0/0:30,0:30:89.52:0,90,1763	0/0:30,0:30:87.26:0,87,1726	0/0:20,0:20:57.20:0,57,1152	0/0:13,0:13:39.09:0,39,731	0/1:10,7:18:99:162,0,316	0/0:13,0:13:39.13:0,39,774	0/0:21,0:21:63.17:0,63,1207	0/0:22,0:22:48.91:0,49,1080	0/0:17,0:17:51.17:0,51,1009	0/0:31,0:31:93.32:0,93,1856	0/0:17,0:17:48.13:0,48,935	0/0:19,0:19:57.18:0,57,1102	0/0:20,0:20:54.18:0,54,1045	0/0:63,0:63:99:0,184,3627	0/0:18,0:18:51.11:0,51,956	0/1:12,3:15:99:239,0,200	0/1:21,5:25:99:105,0,321	0/0:17,0:17:51.18:0,51,1034	0/1:14,3:17:86.44:86,0,321	0/0:6,0:6:18.06:0,18,366	0/1:1,4:5:0.93:89,0,1
chr10	37758371	.	TTTGTA	T	506.80	PASS	AB=0.938;AC=6;AF=0.107;AN=56;BaseQRankSum=7.950;DP=632;FS=0.000;HRun=0;HaplotypeScore=157.6821;InbreedingCoeff=0.1289;MQ=62.60;MQ0=2;MQRankSum=-5.608;QD=6.67;ReadPosRankSum=2.105;VQSLOD=2.6446;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,116,3472	0/0:7,0:7:21.07:0,21,674	0/0:33,0:27:7.06:0,7,1634	0/0:50,0:35:33.28:0,33,1958	0/0:14,0:14:39.13:0,39,1220	0/0:15,0:15:45.12:0,45,1419	0/0:35,0:35:99:0,105,3132	0/0:24,0:24:72.23:0,72,2158	0/0:31,0:31:90.31:0,90,2900	0/0:21,0:21:57.15:0,57,1651	0/0:14,0:14:42.14:0,42,1346	0/1:18,0:18:99:103,0,303	0/0:15,0:15:45.15:0,45,1491	0/0:19,0:19:57.15:0,57,1722	0/0:22,0:22:62.81:0,63,2096	0/0:18,0:18:54.14:0,54,1719	0/0:34,0:34:99:0,102,3220	0/0:15,0:15:42.13:0,42,1267	0/0:21,0:21:63.20:0,63,1857	0/0:21,0:21:60.20:0,60,1898	0/0:64,0:64:99:0,187,5663	0/0:19,0:19:57.19:0,57,1746	0/1:12,0:12:65.94:66,0,182	0/1:25,1:25:6.53:7,0,381	0/0:16,0:16:48.12:0,48,1519	0/1:11,4:15:99:257,0,349	0/0:7,0:7:21.07:0,21,696	1/1:5,0:5:1.86:190,2,0
chr10	37758374	.	GT	G	49.75	PASS	AB=0.694;AC=2;AF=0.036;AN=56;BaseQRankSum=5.597;DP=635;FS=0.000;HRun=3;HaplotypeScore=114.6889;InbreedingCoeff=-0.0281;MQ=62.71;MQ0=1;MQRankSum=-3.326;QD=2.49;ReadPosRankSum=2.653;VQSLOD=-0.0824;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,108,1697	0/0:7,0:7:21.07:0,21,336	0/0:32,0:27:46.40:0,46,911	0/0:50,0:34:83.31:0,83,1199	0/0:14,0:14:36.12:0,36,575	0/0:16,0:16:45.14:0,45,695	0/0:34,0:34:99:0,99,1563	0/0:26,0:26:78.26:0,78,1221	0/0:31,0:31:90.31:0,90,1428	0/0:23,0:23:66.16:0,66,959	0/0:16,0:16:45.14:0,45,682	0/0:10,7:17:26.78:0,27,331	0/0:15,0:15:45.15:0,45,718	0/0:17,0:17:51.17:0,51,815	0/0:22,0:22:63.21:0,63,1007	0/0:19,0:19:33.81:0,34,795	0/0:33,0:33:99:0,99,1557	0/0:14,0:14:39.13:0,39,616	0/0:20,0:20:60.20:0,60,939	0/0:22,0:22:60.20:0,60,956	0/0:66,0:66:99:0,187,2874	0/0:19,0:19:54.18:0,54,848	0/0:10,2:12:13.99:0,14,218	0/0:21,4:25:23.39:0,23,312	0/0:17,0:17:45.15:0,45,719	0/1:12,3:15:46.43:46,0,321	0/0:9,0:9:27.09:0,27,424	0/1:1,4:5:19.89:92,0,20
chr10	37758380	.	TGTGAATG	T	778.35	PASS	AB=0.940;AC=6;AF=0.107;AN=56;BaseQRankSum=8.145;DP=639;FS=0.780;HRun=0;HaplotypeScore=177.2578;InbreedingCoeff=0.2426;MQ=59.36;MQ0=1;MQRankSum=-6.465;QD=10.96;ReadPosRankSum=3.042;VQSLOD=2.6140;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,120,4471	0/0:6,0:6:18.06:0,18,755	0/0:33,0:26:73.16:0,73,2100	0/0:52,0:35:75.36:0,75,2076	0/0:14,0:14:39.12:0,39,1454	0/0:16,0:16:45.15:0,45,1789	0/0:38,0:38:99:0,111,3944	0/0:22,0:22:66.22:0,66,2377	0/0:32,0:32:93.32:0,93,3607	0/0:21,0:21:57.20:0,57,2303	0/0:16,0:16:48.16:0,48,1930	0/1:16,0:16:99:173,0,302	0/0:18,0:18:54.19:0,54,2183	0/0:17,0:17:51.18:0,51,2016	0/0:25,0:25:72.25:0,72,2751	0/0:19,0:19:57.20:0,57,2376	0/0:34,0:34:99:0,99,3703	0/0:13,0:13:36.12:0,36,1372	0/0:19,0:19:57.20:0,57,2201	0/0:20,0:20:57.20:0,57,2195	0/0:65,0:65:99:0,193,7392	0/0:18,0:18:54.19:0,54,2107	0/1:9,0:9:96.10:96,0,136	0/1:24,1:25:65.62:66,0,385	0/0:18,0:18:51.18:0,51,1887	0/1:12,4:16:99:319,0,367	0/0:10,0:10:30.10:0,30,1197	1/1:5,0:5:14.84:253,15,0
chr10	37758382	.	TGAATG	T	718.02	PASS	AB=0.739;AC=6;AF=0.107;AN=56;BaseQRankSum=7.945;DP=636;FS=0.000;HRun=0;HaplotypeScore=151.0569;InbreedingCoeff=0.2430;MQ=59.34;MQ0=1;MQRankSum=-6.319;QD=10.72;ReadPosRankSum=3.129;VQSLOD=2.5792;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,120,3689	0/0:6,0:6:18.06:0,18,599	0/0:33,0:25:74.25:0,74,2036	0/0:53,0:35:68.53:0,69,1963	0/0:13,0:13:36.12:0,36,1162	0/0:17,0:17:48.16:0,48,1540	0/0:35,0:35:99:0,105,3293	0/0:20,0:20:60.21:0,60,1900	0/0:32,0:32:93.32:0,93,2993	0/0:22,0:22:60.21:0,60,1967	0/0:16,0:16:48.16:0,48,1584	0/1:7,9:16:99:131,0,313	0/0:18,0:18:54.19:0,54,1764	0/0:17,0:17:51.18:0,51,1661	0/0:27,0:27:78.27:0,78,2319	0/0:19,0:19:57.20:0,57,1898	0/0:34,0:34:99:0,99,3090	0/0:13,0:13:33.11:0,33,1067	0/0:19,0:19:57.20:0,57,1858	0/0:20,0:20:57.20:0,57,1882	0/0:65,0:65:99:0,193,6186	0/0:18,0:18:54.19:0,54,1731	0/1:4,3:7:81.06:81,0,149	0/1:19,5:24:21.14:21,0,366	0/0:19,0:19:53.21:0,53,1613	0/1:11,4:15:99:327,0,358	0/0:10,0:10:30.10:0,30,944	1/1:1,4:5:14.79:286,15,0
chr10	37758389	.	G	GTT	651.32	PASS	AB=0.838;AC=6;AF=0.107;AN=56;BaseQRankSum=9.417;DP=643;FS=1.432;HRun=1;HaplotypeScore=125.5602;InbreedingCoeff=0.6261;MQ=57.60;MQ0=1;MQRankSum=-7.561;QD=10.34;ReadPosRankSum=-2.254;VQSLOD=-0.3240;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,126,1784	0/0:7,0:7:21.04:0,21,297	0/0:31,0:23:45.77:0,46,736	0/0:51,0:29:70.37:0,70,863	0/0:12,0:12:33.11:0,33,505	0/0:16,0:16:40.66:0,41,640	0/0:34,0:34:90.26:0,90,1309	0/0:18,0:18:51.17:0,51,762	0/0:31,0:31:84:0,84,1241	0/0:26,0:26:54.42:0,54,969	0/0:15,0:15:45.15:0,45,683	0/1:12,4:16:1:252,0,1	0/0:20,0:20:57.16:0,57,846	0/0:21,0:21:60.19:0,60,892	0/0:27,0:27:78.23:0,78,1148	0/0:22,0:22:60.20:0,60,918	0/0:29,0:29:78.25:0,78,1169	0/0:13,0:13:1.15:0,1,444	0/0:20,0:20:60.12:0,60,888	0/0:19,0:19:51.16:0,51,751	0/0:70,0:70:99:0,179,2845	0/0:17,0:17:51.16:0,51,753	1/1:6,3:9:14.91:210,15,0	1/1:18,6:24:21.52:188,22,0	0/0:17,0:17:45.14:0,45,664	0/1:12,2:14:14.43:134,0,14	0/0:10,0:10:30.08:0,30,437	0/0:5,0:5:2.68:0,3,36
chr10	37758437	.	A	AGT	2369.51	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=4.915;DP=710;FS=0.516;HRun=0;HaplotypeScore=139.7500;InbreedingCoeff=0.9755;MQ=61.16;MQ0=3;MQRankSum=-3.681;QD=33.85;ReadPosRankSum=-2.880;VQSLOD=4.7758;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:52:99:0,115,1568	0/0:5,0:5:12.04:0,12,153	0/0:34,0:16:31.82:0,32,377	0/0:30,0:20:32.13:0,32,381	0/0:14,0:14:30.07:0,30,363	0/0:16,0:16:21.24:0,21,473	0/0:44,0:44:78.72:0,79,1339	0/0:34,0:34:43.17:0,43,899	0/0:29,0:29:72.19:0,72,895	0/0:32,0:32:84.22:0,84,1041	0/0:17,0:17:36.11:0,36,458	1/1:1,23:24:57.19:947,57,0	0/0:28,0:28:72.19:0,72,882	0/0:29,0:29:78.22:0,78,964	0/0:27,0:27:75.23:0,75,932	0/0:23,0:23:66.21:0,66,840	0/0:25,0:26:60.04:0,60,799	0/0:11,0:12:23.91:0,24,281	0/0:19,0:19:45.14:0,45,573	0/0:23,0:23:60.19:0,60,764	0/0:63,0:64:99:0,156,1968	0/0:14,0:14:33.09:0,33,407	1/1:0,15:16:35.97:592,36,0	1/1:2,27:30:60.20:973,60,0	0/0:17,0:17:45.13:0,45,560	0/0:22,0:22:30.18:0,30,628	0/0:22,0:22:62.93:0,63,773	0/0:7,0:7:12.04:0,12,153
chr10	37758544	.	G	GCA	1098.77	PASS	AB=0.854;AC=7;AF=0.135;AN=52;BaseQRankSum=-0.765;DP=479;FS=9.358;HRun=0;HaplotypeScore=122.8068;InbreedingCoeff=0.2763;MQ=60.16;MQ0=4;MQRankSum=-0.203;QD=10.17;ReadPosRankSum=0.647;VQSLOD=2.6442;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:28:57:0,57,683	./.	0/0:25,0:14:1.37:0,1,29	0/1:31,0:13:2.74:3,0,17	0/0:15,0:16:20.82:0,21,187	0/0:16,0:17:6:0,6,61	0/0:28,0:30:62.77:0,63,695	0/0:23,0:23:39.12:0,39,468	0/0:15,0:15:24.03:0,24,281	0/0:13,0:12:2.34:0,2,147	0/0:9,0:8:9.03:0,9,108	1/1:8,2:10:3.01:36,3,0	0/0:14,0:14:8.90:0,9,75	0/0:11,0:11:24.08:0,24,297	0/0:16,0:16:13.04:0,13,148	0/0:12,0:12:24.04:0,24,287	0/0:35,0:35:80.56:0,81,931	0/0:14,0:12:32.80:0,33,359	0/0:13,0:13:18.06:0,18,221	0/0:11,0:11:6.02:0,6,72	0/0:33,0:34:51.96:0,52,599	0/0:9,0:9:3.01:0,3,36	./.	0/1:26,8:33:39.13:312,0,39	0/0:7,0:7:12.04:0,12,150	0/1:18,7:24:7.78:766,0,8	0/0:10,0:11:8.86:0,9,86	1/1:0,6:6:6.02:97,6,0
chr10	37758558	.	AGGCCCT	A	2435.69	PASS	AB=0.983;AC=33;AF=0.611;AN=54;BaseQRankSum=2.985;DP=456;FS=5.708;HRun=0;HaplotypeScore=133.8452;InbreedingCoeff=-0.2462;MQ=52.80;MQ0=13;MQRankSum=-2.391;QD=5.60;ReadPosRankSum=3.145;VQSLOD=2.2204;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:30,3:33:99:121,0,141	./.	0/1:34,0:6:4.60:5,0,77	0/1:32,3:6:65.43:65,0,66	0/1:14,0:14:11.10:11,0,167	0/1:16,0:16:5.60:6,0,65	0/1:23,0:23:63.22:63,0,198	0/1:18,0:16:6.49:6,0,57	0/1:11,0:11:29.09:29,0,155	0/1:11,0:10:47.43:92,0,47	0/0:9,0:8:5.99:0,6,89	1/1:2,7:9:0.89:2,1,0	1/1:12,0:12:9.80:72,10,0	0/1:11,0:11:6.31:27,0,6	0/1:19,0:19:29.10:120,0,29	0/1:8,1:9:56.45:56,0,122	0/1:35,0:35:99:146,0,593	0/1:13,0:12:5.87:7,0,6	1/1:11,0:10:9.96:41,10,0	0/0:10,0:10:6.02:0,6,89	0/1:33,1:32:65.61:66,0,106	1/1:6,0:6:5.94:42,6,0	0/1:2,0:2:0:0,0,0	1/1:26,3:29:35.50:650,36,0	0/1:7,0:7:8.23:8,0,41	1/1:23,0:22:45.05:776,45,0	1/1:13,0:12:8.73:76,9,0	1/1:6,0:6:6.02:99,6,0
chr10	37758560	.	GCCCTCACACACACACA	G	7877.48	PASS	AB=0.874;AC=40;AF=0.769;AN=52;BaseQRankSum=-8.464;DP=450;FS=1.892;HRun=0;HaplotypeScore=165.6307;InbreedingCoeff=-0.0767;MQ=52.74;MQ0=14;MQRankSum=-0.129;QD=18.23;ReadPosRankSum=-4.218;VQSLOD=2.7922;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:35,0:35:99:494,0,451	./.	0/1:33,0:5:21.22:21,0,87	0/1:34,0:5:44.97:45,0,67	0/1:3,0:13:10.96:11,0,246	1/1:1,12:13:3.01:126,3,0	1/1:22,0:22:48.16:801,48,0	1/1:2,16:16:45.11:659,45,0	0/1:11,0:11:77.88:78,0,559	1/1:3,9:10:19.82:245,20,0	1/1:2,6:7:2.70:37,3,0	1/1:7,0:9:0.89:2,1,0	1/1:0,12:12:11.91:445,12,0	1/1:8,1:11:27.09:645,27,0	1/1:1,18:21:18.06:814,18,0	0/1:9,0:9:99:178,0,236	0/1:34,0:35:99:168,0,2723	1/1:13,0:12:32.44:522,32,0	1/1:1,10:10:29.89:431,30,0	./.	1/1:35,0:33:52.73:907,53,0	1/1:0,6:6:6.02:197,6,0	0/1:0,0:1:0:0,0,0	0/1:22,0:29:27.26:27,0,676	1/1:6,0:6:12.04:222,12,0	0/1:19,0:20:99:469,0,517	1/1:1,12:13:8.86:335,9,0	0/0:6,0:6:6.02:0,6,144
chr10	37758561	.	C	CA	196.97	PASS	AB=0.956;AC=11;AF=0.212;AN=52;BaseQRankSum=1.429;DP=442;FS=1.627;HRun=0;HaplotypeScore=119.0132;InbreedingCoeff=0.0822;MQ=52.73;MQ0=14;MQRankSum=1.453;QD=1.15;ReadPosRankSum=-2.476;VQSLOD=2.0414;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:35,1:36:11.06:11,0,40	./.	0/1:33,0:5:13.82:14,0,77	0/0:34,0:5:7.01:0,7,80	1/1:11,1:12:7.50:45,7,0	0/0:13,0:13:2.92:0,3,17	0/0:22,0:22:0.74:0,1,41	0/1:18,0:16:7.85:79,0,8	0/1:9,2:11:11.35:28,0,11	0/0:11,0:9:7.36:0,7,21	1/1:7,0:6:2.94:18,3,0	0/0:9,0:9:1.82:0,2,5	0/0:12,0:12:4.66:0,5,13	0/0:13,0:13:16.69:0,17,58	0/0:20,0:20:4.19:0,4,15	0/0:8,0:8:8.40:0,8,31	0/1:29,5:34:86.41:86,0,88	0/0:13,0:12:14.13:0,14,104	0/0:11,0:10:8.71:0,9,26	./.	0/0:34,0:32:20.60:0,21,64	0/0:6,0:6:1.55:0,2,4	0/1:1,0:1:0:0,0,0	0/0:29,0:28:16.94:0,17,59	0/0:6,0:6:6.68:0,7,25	0/1:20,0:19:31.35:45,0,31	0/0:13,0:12:4.66:0,5,12	0/0:6,0:6:3.28:0,3,9
chr10	37758576	.	A	AGG	872.56	PASS	AB=0.987;AC=14;AF=0.259;AN=54;BaseQRankSum=-3.371;DP=483;FS=9.711;HRun=0;HaplotypeScore=125.4679;InbreedingCoeff=-0.0714;MQ=51.09;MQ0=24;MQRankSum=-1.013;QD=4.93;ReadPosRankSum=-5.801;VQSLOD=-0.4083;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:50.53:0,51,702	./.	0/0:34,0:4:9.76:0,10,90	0/0:39,0:5:11.01:0,11,110	0/0:13,0:13:4.83:0,5,51	0/0:13,0:13:0.47:0,0,1	0/1:24,3:27:99:255,0,418	0/1:21,0:19:84.83:85,0,120	0/0:10,0:10:20.02:0,20,255	0/1:16,0:12:21.61:22,0,109	1/1:8,0:7:0.47:1,0,0	0/0:10,0:10:0.26:0,0,41	0/1:13,0:13:3.72:4,0,15	0/1:9,0:9:91.63:93,0,92	0/0:21,0:21:0.45:0,0,22	0/0:12,0:11:30.07:0,30,406	0/0:36,0:36:43.12:0,43,880	0/1:16,0:16:99:107,0,447	0/1:13,0:12:99:117,0,141	1/1:9,0:9:5.91:57,6,0	0/1:33,1:31:99:195,0,361	0/1:6,0:6:0.43:49,0,0	0/0:5,0:4:3.01:0,3,43	0/0:32,0:31:42.11:0,42,583	0/1:5,0:4:26.84:27,0,84	0/0:25,0:22:63.16:0,63,850	0/0:14,0:13:6.64:0,7,56	0/0:7,0:7:9.03:0,9,132
chr10	37759115	.	T	TA	673.85	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=3.736;DP=505;FS=8.505;HRun=8;HaplotypeScore=65.5040;InbreedingCoeff=0.9725;MQ=57.61;MQ0=25;MQRankSum=-4.325;QD=19.82;ReadPosRankSum=-1.619;VQSLOD=2.8037;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:40:89.86:0,90,801	0/0:6,0:6:14.99:0,15,134	0/0:10,0:9:22.24:0,22,190	0/0:6,0:5:14.91:0,15,126	0/0:22,0:22:66.02:0,66,597	0/0:20,0:19:44.94:0,45,402	0/0:16,0:14:39.01:0,39,353	0/0:35,0:32:78:0,78,708	0/0:15,0:14:27:0,27,247	0/0:30,0:28:78.03:0,78,708	0/0:16,0:15:39.01:0,39,354	1/1:6,9:14:30.02:329,30,0	0/0:20,0:20:45.02:0,45,411	0/0:14,0:14:36.01:0,36,326	0/0:14,0:13:30.01:0,30,271	0/0:7,0:7:15.01:0,15,137	0/0:38,0:35:79.27:0,79,733	0/0:19,0:15:36:0,36,324	0/0:14,0:13:35.98:0,36,322	0/0:23,0:23:60.03:0,60,549	0/0:6,0:5:15.01:0,15,137	0/0:8,0:8:21.01:0,21,189	1/1:1,9:9:23.94:243,24,0	1/1:0,9:9:26.79:243,27,0	0/0:27,0:23:57.02:0,57,518	0/0:28,0:28:47.82:0,48,240	0/0:23,0:19:53.95:0,54,484	0/0:12,0:11:27.31:0,27,123
chr10	37759151	.	GTACACACAGCTGCACACACATAGCTGCA	G	1596.75	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=6.725;DP=610;FS=14.987;HRun=0;HaplotypeScore=405.2511;InbreedingCoeff=0.9451;MQ=64.63;MQ0=0;MQRankSum=-5.094;QD=42.02;ReadPosRankSum=1.623;VQSLOD=0.8634;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,105,7938	0/0:6,0:6:15.05:0,15,1485	0/0:20,0:18:21.11:0,21,1238	0/0:15,0:14:9.07:0,9,609	0/0:34,0:34:78.27:0,78,6398	0/0:18,0:18:30.10:0,30,2019	0/0:21,0:21:45.15:0,45,3358	0/0:38,0:38:84.24:0,84,2914	0/0:14,0:14:33.11:0,33,2786	0/0:39,0:39:99:0,105,8429	0/0:33,0:33:78.27:0,78,6198	1/1:6,12:18:18.06:791,18,0	0/0:26,0:26:63.22:0,63,5513	0/0:16,0:16:48.16:0,48,3998	0/0:12,0:12:30.10:0,30,2493	0/0:11,0:11:27.09:0,27,2706	0/0:30,0:30:69.24:0,69,5506	0/0:21,0:21:60.19:0,60,5709	0/0:16,0:16:24.07:0,24,1045	0/0:17,0:17:33.11:0,33,2282	0/0:29,0:29:87.30:0,87,8529	0/0:16,0:16:45.15:0,45,3558	1/1:7,1:8:8.96:198,9,0	1/1:10,2:12:20:743,20,0	0/0:23,0:23:48.11:0,48,3154	0/0:34,0:34:69.24:0,69,5032	0/0:23,0:23:55.38:0,55,2845	0/0:18,0:18:51.16:0,51,5507
chr10	37759177	.	GCATA	G	373.97	PASS	AB=0.727;AC=5;AF=0.089;AN=56;BaseQRankSum=5.393;DP=666;FS=14.178;HRun=0;HaplotypeScore=131.2047;InbreedingCoeff=0.8066;MQ=64.55;MQ0=3;MQRankSum=-5.207;QD=11.00;ReadPosRankSum=-0.026;VQSLOD=2.2372;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,123,3062	0/0:10,0:10:30.10:0,30,821	0/0:24,0:20:50.92:0,51,1092	0/0:33,0:25:65.67:0,66,1521	0/0:28,0:28:81.28:0,81,2206	0/0:18,0:18:39.13:0,39,1043	0/0:23,0:23:63.07:0,63,1544	0/0:30,0:30:90.11:0,90,1970	0/0:20,0:20:51.18:0,51,1394	0/0:41,0:41:99:0,123,3193	0/0:30,0:30:84.29:0,84,2243	1/1:13,1:14:12.04:219,12,0	0/0:27,0:27:72.23:0,72,1904	0/0:20,0:20:57.18:0,57,1450	0/0:18,0:18:42.14:0,42,1121	0/0:18,0:17:45.15:0,45,1202	0/0:33,0:33:87.26:0,87,2229	0/0:31,0:30:90.19:0,90,2373	0/0:10,0:10:24.08:0,24,626	0/0:16,0:16:42.14:0,42,1114	0/0:50,0:50:99:0,151,4038	0/0:18,0:18:54.10:0,54,1356	0/1:5,1:8:5.94:47,0,6	1/1:6,3:12:14.12:229,14,0	0/0:20,0:20:48.15:0,48,1208	0/0:33,0:33:90.31:0,90,2405	0/0:20,0:20:43.33:0,43,1033	0/0:16,0:16:48.16:0,48,1314
chr10	37760274	.	T	TACAGACACAGAC	6581.05	PASS	AB=0.924;AC=32;AF=0.615;AN=52;BaseQRankSum=-3.241;DP=622;FS=6.026;HRun=0;HaplotypeScore=212.7152;InbreedingCoeff=0.5200;MQ=65.08;MQ0=2;MQRankSum=-5.238;QD=16.96;ReadPosRankSum=-6.153;VQSLOD=1.6795;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:75.19:0,75,1675	1/1:4,3:8:9.08:359,9,0	0/0:27,0:18:18.02:0,18,250	0/1:30,0:22:9.27:9,0,155	0/0:22,0:22:39.13:0,39,1170	1/1:17,9:27:9.86:307,10,0	1/1:22,0:22:1.18:203,1,0	1/1:44,0:44:75.19:1495,75,0	0/0:29,0:29:72.16:0,72,1933	1/1:9,5:15:21.03:568,21,0	0/1:17,9:30:0:0,0,0	1/1:17,0:17:9.03:263,9,0	1/1:8,14:22:8.95:525,9,0	1/1:8,9:17:6.02:212,6,0	1/1:7,10:18:3.89:146,4,0	0/0:14,0:14:21.05:0,21,616	0/0:29,0:29:81.19:0,81,2153	1/1:5,8:15:9.03:286,9,0	1/1:14,0:14:17.94:328,18,0	./.	1/1:24,0:24:6.02:96,6,0	./.	1/1:12,0:12:2.49:24,2,0	0/0:13,0:13:2.04:0,2,6	0/0:12,9:23:0.47:0,0,1	0/1:18,0:18:99:100,0,301	1/1:12,15:33:33.11:1565,33,0	0/1:22,0:22:93.84:94,0,820
chr10	37760300	.	C	CAG	2142.42	PASS	AB=0.903;AC=14;AF=0.250;AN=56;BaseQRankSum=4.140;DP=709;FS=40.886;HRun=0;HaplotypeScore=144.6333;InbreedingCoeff=-0.0257;MQ=50.72;MQ0=11;MQRankSum=-2.217;QD=8.15;ReadPosRankSum=0.170;VQSLOD=1.6430;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,114,1690	0/1:9,0:9:17.85:18,0,51	0/0:27,1:11:27.02:0,27,338	0/0:42,0:15:0.42:0,0,232	0/0:38,0:37:93.74:0,94,1353	0/0:25,0:25:17.61:0,18,253	0/0:15,12:27:26.95:0,27,462	0/1:19,23:40:99:1119,0,509	0/0:31,0:31:90.15:0,90,1238	0/1:22,0:22:99:116,0,613	0/0:38,0:38:41.98:0,42,621	0/1:5,10:15:24.27:91,0,24	0/1:17,0:17:49.61:50,0,103	0/0:14,1:15:8.98:0,9,135	0/1:18,0:18:44.83:45,0,143	0/0:10,0:10:30.07:0,30,415	0/0:37,0:37:99:0,105,1500	0/1:16,0:16:22.22:22,0,176	0/1:16,6:22:99:233,0,396	0/0:29,0:29:51.13:0,51,707	0/0:11,11:22:8.38:0,8,127	0/0:14,0:13:18.06:0,18,275	1/1:14,3:16:5.03:31,5,0	0/0:3,8:12:1.95:0,2,6	0/0:26,1:27:26.97:0,27,361	0/1:25,0:25:22.73:206,0,23	0/1:32,0:32:99:119,0,439	1/1:27,1:28:25.19:251,25,0
chr10	37760304	.	CAG	C	1356.76	PASS	AB=0.994;AC=10;AF=0.179;AN=56;BaseQRankSum=11.947;DP=699;FS=15.872;HRun=0;HaplotypeScore=144.4754;InbreedingCoeff=0.4295;MQ=51.16;MQ0=11;MQRankSum=-1.820;QD=7.22;ReadPosRankSum=-2.153;VQSLOD=2.0762;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:92.01:0,92,1594	0/0:9,0:9:11.66:0,12,105	0/0:25,0:8:20.16:0,20,149	0/1:43,0:17:2.99:3,0,143	0/0:40,0:39:78.89:0,79,1535	0/0:25,0:25:21.29:0,21,358	0/0:25,0:25:29.42:0,29,597	0/1:42,0:40:76.57:77,0,654	0/0:28,0:28:66.05:0,66,1264	0/0:20,0:20:22.03:0,22,741	0/0:37,0:37:40.30:0,40,792	0/1:15,0:15:16.50:16,0,17	0/0:17,0:17:15.05:0,15,237	0/0:14,0:14:12.03:0,12,159	0/0:17,0:17:14.67:0,15,201	0/0:9,0:9:27.09:0,27,501	0/0:39,0:39:99:0,105,1559	0/0:15,0:15:5.81:0,6,219	0/1:20,0:20:14.28:14,0,475	0/0:30,0:30:36.44:0,36,851	0/0:22,0:21:12.72:0,13,212	0/0:14,0:13:18.06:0,18,346	0/0:14,0:14:2.60:0,3,10	1/1:12,0:12:2.74:12,3,0	0/0:28,0:28:29.78:0,30,488	1/1:2,24:26:71.74:793,72,0	0/0:31,0:31:34.25:0,34,726	1/1:23,6:29:61.53:590,62,0
chr10	37760306	.	GAC	G	372.83	PASS	AB=0.971;AC=6;AF=0.107;AN=56;BaseQRankSum=7.823;DP=687;FS=0.000;HRun=0;HaplotypeScore=146.3424;InbreedingCoeff=0.2902;MQ=49.98;MQ0=12;MQRankSum=-1.723;QD=3.73;ReadPosRankSum=0.227;VQSLOD=2.7147;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:61.10:0,61,1055	0/0:9,0:9:12.04:0,12,165	0/0:25,0:8:9:0,9,82	0/0:44,1:16:14.83:0,15,158	0/0:39,1:39:50.59:0,51,1338	0/0:25,0:25:24.06:0,24,385	0/0:24,0:24:34.26:0,34,540	0/0:41,0:39:51.07:0,51,595	0/0:27,0:27:67.10:0,67,947	0/0:21,0:21:40.46:0,40,600	0/0:36,0:36:40.30:0,40,682	0/0:15,0:15:5.04:0,5,36	0/0:15,0:15:15:0,15,203	0/0:14,0:14:11.96:0,12,160	0/0:16,0:16:5.56:0,6,177	0/0:9,0:9:27.08:0,27,416	0/0:37,0:37:48.43:0,48,1189	0/1:13,1:14:18.83:19,0,193	0/1:19,1:20:34.15:34,0,378	0/0:28,1:29:17.60:0,18,787	0/0:21,0:20:12.93:0,13,197	0/0:14,0:13:18.06:0,18,293	0/0:15,0:14:2.60:0,3,10	0/1:12,0:12:0.01:0,0,0	0/0:26,1:27:26.92:0,27,438	1/1:26,0:26:21.86:304,22,0	0/0:32,0:32:51.02:0,51,741	0/1:28,0:28:98.15:136,0,98
chr10	37760310	.	C	CACACAG	308.61	PASS	AB=1.000;AC=10;AF=0.185;AN=54;BaseQRankSum=6.538;DP=687;FS=18.553;HRun=0;HaplotypeScore=179.4927;InbreedingCoeff=0.0049;MQ=49.44;MQ0=12;MQRankSum=-7.397;QD=1.68;ReadPosRankSum=-2.663;VQSLOD=0.9779;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:93.72:0,94,1910	0/1:9,0:9:37.26:37,0,135	0/0:29,0:9:17.96:0,18,256	0/0:44,0:13:15.17:0,15,253	0/0:41,0:40:99:0,102,2082	0/0:25,0:25:22.78:0,23,489	0/0:23,0:23:31.48:0,31,749	0/1:38,0:36:65.90:66,0,1031	0/0:25,0:25:69.22:0,69,1538	0/1:24,0:24:7.48:7,0,1089	0/0:35,0:35:41.81:0,42,962	1/1:12,2:14:5.06:21,5,0	0/1:16,0:16:99:102,0,203	0/0:14,0:15:11.84:0,12,199	0/1:16,0:16:50.98:51,0,250	0/0:9,0:9:27.08:0,27,576	0/0:37,0:37:82.72:0,83,2013	0/1:14,0:14:46.39:46,0,289	0/1:20,0:20:13.01:13,0,602	0/0:27,0:27:54.18:0,54,1154	0/0:22,0:21:14.04:0,14,261	0/0:14,0:13:18.06:0,18,404	./.	0/0:10,1:11:0.44:0,0,0	0/0:29,0:29:25.38:0,25,595	0/0:27,0:27:59.80:0,60,564	0/1:33,0:33:99:103,0,850	0/0:27,0:27:42.89:0,43,807
chr10	37760320	.	C	CAGAG	1485.11	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=8.732;DP=680;FS=0.686;HRun=0;HaplotypeScore=155.9126;InbreedingCoeff=0.6655;MQ=50.10;MQ0=14;MQRankSum=-3.203;QD=18.11;ReadPosRankSum=1.995;VQSLOD=3.5953;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:90.28:0,90,1607	0/0:10,0:10:18.01:0,18,297	0/0:37,0:10:30.10:0,30,518	0/0:45,0:15:21.85:0,22,441	0/0:42,0:42:99:0,114,2063	0/0:23,0:24:26.15:0,26,526	0/0:20,0:20:37.57:0,38,710	0/0:31,0:29:79.19:0,79,1204	0/0:25,0:25:72.04:0,72,1306	0/0:26,0:26:78.15:0,78,1249	0/0:31,0:31:45:0,45,875	1/1:12,0:12:2.51:30,3,0	0/0:15,0:15:14.49:0,14,375	0/0:16,0:16:20.89:0,21,293	0/0:15,0:15:17.67:0,18,308	0/0:10,0:10:30.09:0,30,554	0/0:37,0:37:99:0,101,1831	0/0:14,0:14:21:0,21,328	0/0:22,0:22:55.89:0,56,861	0/0:28,0:28:57.17:0,57,1073	0/0:21,0:20:23.07:0,23,360	0/0:13,0:12:18.06:0,18,359	1/1:14,0:13:3.01:48,3,0	0/0:10,0:10:0.89:0,1,2	0/0:27,0:27:35.97:0,36,637	0/1:29,0:29:19.02:833,0,19	0/0:34,0:34:62.91:0,63,1076	1/1:23,4:27:36.97:701,37,0
chr10	37762086	.	T	TAC	1130.24	PASS	AB=0.940;AC=20;AF=0.385;AN=52;BaseQRankSum=0.519;DP=543;FS=4.887;HRun=0;HaplotypeScore=81.3072;InbreedingCoeff=0.3620;MQ=54.32;MQ0=24;MQRankSum=1.845;QD=5.00;ReadPosRankSum=0.383;VQSLOD=2.2355;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:41:35.88:0,36,367	0/0:10,0:10:0.64:0,1,119	./.	./.	1/1:11,1:12:10.97:100,11,0	0/1:19,1:20:29.80:30,0,116	0/0:17,0:17:18.04:0,18,192	0/1:18,0:16:15.94:16,0,27	1/1:3,1:12:6.01:71,6,0	0/0:22,0:23:19.17:0,19,173	0/1:12,1:13:32.97:33,0,68	1/1:11,2:12:14.99:207,15,0	0/0:13,0:12:13.89:0,14,110	0/0:12,0:11:9.08:0,9,100	1/1:11,0:10:8.68:53,9,0	1/1:4,2:11:9.34:116,9,0	1/1:22,2:27:18.67:170,19,0	0/0:17,0:18:5.30:0,5,155	0/0:19,0:16:6.69:0,7,140	0/0:23,0:23:21.05:0,21,225	0/1:35,0:35:15.71:16,0,234	0/0:10,0:10:19.60:0,20,198	1/1:13,4:16:16.42:176,16,0	0/1:19,9:28:71.15:309,0,71	0/1:6,0:7:8.01:8,0,8	0/0:15,0:17:6.57:0,7,29	0/0:15,0:16:7.36:0,7,110	0/0:3,0:5:2.84:0,3,14
chr10	37762159	.	T	TA	6939.61	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=-9.147;DP=409;FS=5.427;HRun=8;HaplotypeScore=54.8928;InbreedingCoeff=0.9607;MQ=59.95;MQ0=0;MQRankSum=0.214;QD=23.52;ReadPosRankSum=0.407;VQSLOD=5.5175;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:36:79.96:0,80,703	1/1:0,6:6:18.05:208,18,0	0/0:9,0:9:17.98:0,18,160	0/0:13,0:10:22.32:0,22,188	0/0:16,0:16:48:0,48,430	1/1:4,14:18:39.07:435,39,0	1/1:2,4:6:9.03:104,9,0	1/1:5,25:31:75.22:865,75,0	0/0:13,0:13:30.02:0,30,274	1/1:1,10:11:30.08:337,30,0	1/1:6,11:18:35.23:355,35,0	1/1:0,5:5:12.04:138,12,0	1/1:6,6:11:12.13:160,12,0	1/1:5,7:12:15.04:173,15,0	1/1:3,11:14:33.10:381,33,0	0/0:10,0:10:21:0,21,192	0/0:17,0:17:30.01:0,30,274	1/1:2,14:16:36.11:415,36,0	1/1:4,18:22:51.13:575,51,0	1/1:1,12:13:33.10:381,33,0	1/1:3,11:14:15.04:173,15,0	1/1:4,9:13:27.08:311,27,0	1/1:3,12:15:33.10:381,33,0	1/1:4,12:16:18.05:208,18,0	1/1:1,11:12:30.09:346,30,0	1/1:2,17:19:51.14:578,51,0	1/1:5,11:17:24.07:277,24,0	1/1:0,5:5:12.04:138,12,0
chr10	37762315	.	CTACAGTG	C	994.64	PASS	AC=2;AF=0.038;AN=52;BaseQRankSum=0.986;DP=433;FS=10.031;HRun=0;HaplotypeScore=75.5032;InbreedingCoeff=0.6469;MQ=35.81;MQ0=120;MQRankSum=-5.313;QD=52.35;ReadPosRankSum=-0.216;VQSLOD=2.2807;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,15:16:42.14:1088,42,0	0/0:8,0:8:21.07:0,21,818	./.	./.	0/0:20,0:16:27.09:0,27,1078	0/0:23,0:20:27.09:0,27,1077	0/0:11,0:8:18.02:0,18,605	0/0:22,0:11:33.11:0,33,1315	0/0:11,0:11:12.04:0,12,472	0/0:22,0:18:48.16:0,48,1873	0/0:17,0:15:15.05:0,15,597	0/0:11,0:7:18.06:0,18,713	0/0:13,0:9:9.03:0,9,359	0/0:13,0:11:18.06:0,18,719	0/0:13,0:7:12.04:0,12,480	0/0:7,0:6:15.05:0,15,599	0/0:23,0:12:12.04:0,12,479	0/0:22,0:19:39.13:0,39,1393	0/0:18,0:11:33.11:0,33,1271	0/0:13,0:10:30.10:0,30,1198	0/0:11,0:6:6.02:0,6,240	0/0:8,0:6:9.03:0,9,351	0/0:15,0:9:15.05:0,15,589	0/0:9,0:7:6.02:0,6,240	0/0:14,0:11:27.09:0,27,1068	0/0:22,0:20:54.13:0,54,1930	0/0:10,0:10:18.06:0,18,719	0/0:10,0:6:15.05:0,15,600
chr10	37762351	.	TAAA	T	5662.26	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=-1.219;DP=350;FS=5.413;HRun=13;HaplotypeScore=62.3302;InbreedingCoeff=0.8976;MQ=49.89;MQ0=7;MQRankSum=-0.410;QD=27.49;ReadPosRankSum=1.898;VQSLOD=4.0310;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:25:57.19:0,57,1036	1/1:1,5:6:15.05:182,15,0	0/0:1,0:1:2.99:0,3,23	0/0:4,0:3:8.39:0,8,82	0/0:17,0:17:39.13:0,39,736	1/1:0,14:14:39.12:474,39,0	1/1:2,7:9:18.03:219,18,0	1/1:7,14:16:45.04:529,45,0	0/0:10,0:10:24.08:0,24,461	1/1:3,11:14:33.07:401,33,0	1/1:1,17:18:48.07:567,48,0	0/0:2,0:12:12.46:0,12,29	1/1:3,5:7:11.93:127,12,0	1/1:2,8:10:18.06:219,18,0	1/1:0,8:8:18.06:219,18,0	0/0:6,0:6:15.05:0,15,288	0/0:17,0:16:39.13:0,39,748	1/1:2,20:22:46.06:646,46,0	1/1:2,18:19:48.14:584,48,0	1/1:4,10:14:27.04:328,27,0	1/1:1,5:5:8.87:109,9,0	1/1:0,4:4:12.04:146,12,0	0/0:2,0:7:3.57:0,4,9	0/0:2,0:9:6.54:0,7,15	1/1:0,13:13:36.11:438,36,0	0/0:7,0:19:17.93:0,18,57	1/1:0,17:17:40.06:473,40,0	0/0:1,0:10:12.46:0,12,29
chr10	37762643	.	ATC	A	1230.62	PASS	AB=0.521;AC=3;AF=0.054;AN=56;BaseQRankSum=6.494;DP=650;FS=10.778;HRun=0;HaplotypeScore=81.4475;InbreedingCoeff=0.6451;MQ=76.12;MQ0=0;MQRankSum=-0.216;QD=36.19;ReadPosRankSum=-1.323;VQSLOD=5.1507;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,105,1952	0/0:17,0:17:45.61:0,46,812	0/0:16,0:16:41.75:0,42,642	0/0:16,0:16:41.17:0,41,733	0/0:32,0:32:93.32:0,93,1742	0/0:15,0:15:45.15:0,45,842	0/0:26,0:26:78.27:0,78,1453	0/0:27,0:27:75.26:0,75,1405	0/0:23,0:23:69.24:0,69,1292	0/0:31,0:31:93.31:0,93,1715	0/0:26,0:26:72.25:0,72,1334	0/0:28,0:28:81.28:0,81,1486	0/0:21,0:21:57.20:0,57,1056	0/0:19,0:19:54.18:0,54,1001	0/0:28,0:28:75.26:0,75,1405	0/0:7,0:7:21.07:0,21,393	0/0:39,0:39:99:0,99,1834	0/0:21,0:21:60.21:0,60,1124	0/0:19,0:19:57.20:0,57,1058	0/0:29,0:29:75.26:0,75,1401	0/0:25,0:25:72.23:0,72,1312	0/0:20,0:20:60.19:0,60,1070	0/0:27,0:26:69.24:0,69,1286	0/0:16,0:16:42.14:0,42,785	0/0:21,0:21:63.22:0,63,1180	0/1:2,23:25:37.18:939,0,37	0/0:31,0:31:90.31:0,90,1685	1/1:0,9:9:27.09:398,27,0
chr10	37762859	.	AG	A	2776.93	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.226;DP=670;FS=6.578;HRun=3;HaplotypeScore=70.2403;InbreedingCoeff=0.9978;MQ=66.10;MQ0=0;MQRankSum=-2.123;QD=34.71;ReadPosRankSum=0.628;VQSLOD=4.1986;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:81.26:0,81,1191	0/0:11,0:11:30.09:0,30,423	0/0:22,0:18:48.07:0,48,619	0/0:27,1:25:40.82:0,41,761	0/0:13,0:13:36.07:0,36,495	0/0:14,0:14:36.12:0,36,540	0/0:34,0:34:99:0,99,1479	0/0:28,0:28:84.28:0,84,1259	0/0:26,0:26:78.25:0,78,1149	0/0:19,0:19:57.19:0,57,838	0/0:12,0:12:36.12:0,36,539	1/1:0,38:38:99:1401,108,0	0/0:21,0:21:63.21:0,63,939	0/0:19,0:19:57.19:0,57,852	0/0:39,0:39:99:0,111,1640	0/0:20,0:20:60.19:0,60,879	0/0:30,0:30:87.29:0,87,1304	0/0:30,0:30:90.30:0,90,1347	0/0:15,0:15:39.11:0,39,563	0/0:18,0:18:54.18:0,54,807	0/0:58,0:58:99:0,175,2548	0/0:19,0:19:57.19:0,57,853	1/1:0,11:11:27.09:350,27,0	1/1:0,31:31:90.29:1169,90,0	0/0:9,0:8:21.05:0,21,275	0/0:21,0:21:60.19:0,60,881	0/0:30,0:30:90.29:0,90,1327	0/0:26,0:26:75.25:0,75,1106
chr10	37764848	.	A	AG	9653.97	PASS	AB=0.952;AC=33;AF=0.589;AN=56;BaseQRankSum=-11.912;DP=585;FS=9.292;HRun=7;HaplotypeScore=64.9469;InbreedingCoeff=0.9190;MQ=79.59;MQ0=0;MQRankSum=-1.757;QD=27.27;ReadPosRankSum=-2.294;VQSLOD=4.4037;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:66.04:0,66,615	1/1:4,4:8:16.56:169,17,0	0/0:22,0:22:32.61:0,33,334	0/0:23,0:23:45.48:0,45,403	0/0:11,0:11:30.04:0,30,288	1/1:0,11:11:24.07:290,24,0	1/1:5,26:31:63.19:761,63,0	1/1:5,19:24:57.60:672,58,0	0/0:25,0:25:69.06:0,69,652	1/1:5,22:27:63.18:749,63,0	1/1:0,14:14:36.11:435,36,0	0/0:15,0:15:36.04:0,36,341	1/1:4,18:22:54.12:636,54,0	1/1:0,13:13:39.12:471,39,0	1/1:2,21:23:54.16:649,54,0	0/0:14,0:14:39.06:0,39,377	0/0:42,0:42:99:0,114,1094	1/1:3,15:18:45.14:544,45,0	1/1:2,17:19:51.11:600,51,0	1/1:1,12:13:30.08:362,30,0	1/1:4,50:54:99:1522,126,0	1/1:0,18:18:42.13:506,42,0	0/0:14,0:14:11.13:0,11,253	0/0:27,0:27:75.12:0,75,724	1/1:1,17:18:45.14:544,45,0	0/1:3,1:20:21.42:21,0,43	1/1:0,20:21:63.03:724,63,0	0/0:1,0:12:24.22:0,24,71
chr10	37765191	.	GA	G	1096.01	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=6.967;DP=584;FS=1.662;HRun=11;HaplotypeScore=58.5369;InbreedingCoeff=0.8256;MQ=57.79;MQ0=15;MQRankSum=0.321;QD=14.61;ReadPosRankSum=2.020;VQSLOD=4.2121;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,1:47:94.15:0,94,1166	0/0:12,0:12:33.08:0,33,350	0/0:12,0:5:12.02:0,12,121	0/1:9,0:5:33.87:34,0,65	0/0:16,0:14:30:0,30,294	0/0:26,1:28:33.16:0,33,687	0/0:20,0:18:44.62:0,45,471	0/0:26,2:29:22.50:0,23,601	0/0:18,1:22:26.40:0,26,469	0/0:27,0:25:72.17:0,72,756	0/0:25,0:25:54.12:0,54,562	1/1:2,17:19:47.94:394,48,0	0/0:18,0:18:39.08:0,39,402	0/0:17,0:17:42.11:0,42,447	0/0:20,0:20:54.14:0,54,574	0/0:14,0:14:36.08:0,36,377	0/0:28,0:27:66.57:0,67,673	0/0:24,0:24:42.11:0,42,447	0/0:18,0:17:41.82:0,42,396	0/0:18,0:18:40.15:0,40,468	0/0:11,0:11:33.08:0,33,351	0/0:22,0:22:51.12:0,51,537	1/1:3,14:16:35.93:296,36,0	1/1:5,23:30:40.99:522,41,0	0/0:15,2:17:39.08:0,39,402	0/0:18,0:18:48.10:0,48,494	0/0:30,0:30:67.77:0,68,690	0/0:13,0:12:21.05:0,21,224
chr10	37765678	.	ATG	A	846.82	PASS	AB=0.958;AC=21;AF=0.375;AN=56;BaseQRankSum=6.172;DP=606;FS=3.262;HRun=0;HaplotypeScore=153.2787;InbreedingCoeff=0.1916;MQ=60.31;MQ0=3;MQRankSum=-0.010;QD=2.43;ReadPosRankSum=-0.458;VQSLOD=1.9749;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:36,1:37:23.53:143,24,0	0/0:9,0:9:4.82:0,5,35	0/0:16,0:11:0.47:0,0,1	0/0:13,0:11:3.01:0,3,41	0/0:23,3:27:5.32:0,5,490	0/1:26,0:26:33.39:33,0,48	0/1:29,0:27:11.82:28,0,12	0/0:43,0:41:45.65:0,46,298	0/1:25,3:28:32.12:32,0,816	0/1:22,0:22:10.89:11,0,100	0/1:12,0:12:6.18:6,0,19	1/1:26,0:26:13.09:207,13,0	0/0:16,0:15:13.04:0,13,94	1/1:20,0:20:15.72:60,16,0	0/1:19,0:19:5.68:6,0,63	0/1:12,3:15:71.24:71,0,249	0/1:26,4:30:19.41:19,0,569	0/0:16,0:15:9.60:0,10,68	0/0:17,0:15:5.58:0,6,26	0/1:21,0:21:2.44:2,0,20	0/0:20,0:20:3:0,3,25	0/0:18,0:18:15.01:0,15,156	1/1:18,1:19:7.25:164,7,0	1/1:32,0:32:6.67:224,7,0	1/1:12,0:12:2.43:10,2,0	0/0:23,0:22:26.91:0,27,253	0/0:21,0:20:10.27:0,10,58	0/0:18,0:19:26.49:0,26,284
chr10	37765709	.	TGTGC	T	539.65	PASS	AB=0.994;AC=12;AF=0.214;AN=56;BaseQRankSum=5.395;DP=587;FS=0.642;HRun=0;HaplotypeScore=172.4816;InbreedingCoeff=-0.0867;MQ=51.94;MQ0=16;MQRankSum=-3.363;QD=2.25;ReadPosRankSum=0.346;VQSLOD=2.6539;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,38:44:24.08:478,24,0	0/1:8,0:7:1.03:1,0,14	0/0:21,0:6:6.38:0,6,25	0/1:23,0:4:9.59:10,0,35	0/0:21,0:21:48.02:0,48,1010	0/1:25,0:25:7.45:7,0,90	0/0:30,0:28:7.52:0,8,53	0/0:27,0:26:24.80:0,25,326	0/0:27,0:27:75.10:0,75,1684	0/0:24,0:23:2.84:0,3,119	0/0:14,0:14:5.37:0,5,33	0/1:24,1:25:35.55:36,0,50	0/1:11,0:10:28.32:28,0,66	0/0:13,0:13:11.79:0,12,40	0/1:22,0:22:12.63:13,0,60	0/0:14,0:14:38.91:0,39,613	0/0:29,0:29:74.70:0,75,1387	0/1:13,0:11:12.10:12,0,86	0/1:14,0:13:24.24:37,0,24	0/0:12,0:12:5.70:0,6,51	0/0:22,0:21:3.01:0,3,42	0/0:17,0:17:15.01:0,15,155	0/0:20,0:20:18.29:0,18,78	0/1:37,1:38:35.56:36,0,68	0/0:11,0:11:1.82:0,2,6	0/0:26,0:25:31.34:0,31,427	0/1:17,0:16:27.48:27,0,38	0/0:19,0:18:29.53:0,30,424
chr10	37765714	.	GCGCA	G	2084.48	PASS	AB=1.000;AC=32;AF=0.571;AN=56;BaseQRankSum=10.549;DP=505;FS=0.000;HRun=0;HaplotypeScore=146.8054;InbreedingCoeff=0.6910;MQ=56.45;MQ0=14;MQRankSum=-8.706;QD=7.26;ReadPosRankSum=1.794;VQSLOD=2.5932;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:42,0:42:22.35:108,22,0	1/1:7,0:6:5.69:48,6,0	0/0:20,0:5:5.94:0,6,72	0/1:26,0:5:0.23:11,0,0	0/0:19,0:19:45.15:0,45,1075	1/1:16,3:19:27.51:297,28,0	1/1:24,3:26:17.90:155,18,0	1/1:15,0:15:14.99:161,15,0	0/0:24,0:24:69.23:0,69,1677	1/1:17,0:16:33.08:382,33,0	1/1:9,0:9:3:26,3,0	0/0:23,0:23:17.36:0,17,161	1/1:11,0:10:9.03:143,9,0	1/1:9,0:9:18.01:171,18,0	1/1:15,2:17:12.01:142,12,0	0/0:13,0:13:39.13:0,39,826	0/0:29,0:29:77.75:0,78,1863	1/1:11,1:11:12.04:173,12,0	0/1:12,0:12:12.60:227,0,13	1/1:14,0:14:2.78:29,3,0	0/1:17,0:16:0:0,0,0	0/1:10,0:10:0.04:0,0,0	0/0:19,0:19:25.46:0,25,172	0/0:33,0:33:30:0,30,212	1/1:7,1:8:2.74:30,3,0	0/0:22,0:21:3.15:0,3,398	1/1:13,2:14:12.03:175,12,0	0/0:16,0:15:29.86:0,30,304
chr10	37765716	.	GCACGCGTGTGCA	G	3597.90	PASS	AB=0.641;AC=28;AF=0.519;AN=54;BaseQRankSum=7.390;DP=499;FS=0.559;HRun=0;HaplotypeScore=183.4971;InbreedingCoeff=0.6499;MQ=57.77;MQ0=14;MQRankSum=-7.278;QD=15.99;ReadPosRankSum=0.432;VQSLOD=2.6973;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:41:24.08:0,24,769	1/1:3,4:6:5.85:55,6,0	0/0:21,0:5:9:0,9,138	0/0:27,0:6:2.13:0,2,40	0/0:19,0:19:44.89:0,45,2257	1/1:7,4:19:14.49:350,14,0	1/1:6,16:26:14.28:301,14,0	1/1:4,10:14:24.46:634,24,0	0/0:24,0:24:69.24:0,69,3357	1/1:1,8:15:17.15:550,17,0	1/1:2,4:9:2.66:26,3,0	0/0:22,0:22:36.12:0,36,1402	0/1:3,4:10:3.92:108,0,4	0/1:0,2:9:0.37:1,0,0	1/1:4,10:17:5.76:132,6,0	0/0:13,0:13:39.13:0,39,2016	0/0:28,0:28:77.75:0,78,4193	1/1:4,6:11:15.01:290,15,0	1/1:0,11:11:32.94:774,33,0	1/1:1,11:14:2.95:40,3,0	0/1:2,14:15:0:0,0,0	./.	0/0:20,0:20:28.01:0,28,1168	0/0:35,0:35:51.18:0,51,2074	1/1:3,3:8:0.34:1,0,0	0/1:19,1:20:82.05:82,0,972	1/1:4,9:14:5.29:253,5,0	0/0:16,0:15:29.26:0,29,815
chr10	37767329	.	G	GACAC	2241.66	PASS	AC=38;AF=0.731;AN=52;BaseQRankSum=-1.531;DP=326;FS=8.049;HRun=0;HaplotypeScore=100.9215;InbreedingCoeff=0.5407;MQ=48.92;MQ0=9;MQRankSum=-1.321;QD=11.99;ReadPosRankSum=-2.188;VQSLOD=1.7503;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:12:6.01:0,6,56	1/1:2,1:5:4.25:81,4,0	0/0:42,0:7:6:0,6,68	0/0:33,0:12:4.95:0,5,54	0/0:5,0:10:3:0,3,28	1/1:5,3:8:6.02:126,6,0	1/1:6,1:7:3.01:72,3,0	1/1:9,5:15:20.54:343,21,0	0/0:3,0:7:14.94:0,15,129	1/1:8,0:8:9.03:180,9,0	1/1:8,3:13:3.01:71,3,0	./.	1/1:3,1:4:3.01:72,3,0	1/1:7,0:8:3.01:70,3,0	1/1:8,3:12:9.02:170,9,0	0/0:6,0:9:9.01:0,9,84	0/0:9,0:11:6.01:0,6,56	1/1:3,1:5:5.75:83,6,0	1/1:12,2:12:6.49:145,6,0	./.	1/1:5,2:8:5.64:82,6,0	1/1:4,3:9:8.58:125,9,0	1/1:5,0:5:3.01:67,3,0	1/1:12,0:12:2.95:31,3,0	1/1:6,3:9:6.02:115,6,0	1/1:24,0:24:12.04:208,12,0	1/1:6,3:11:11.65:207,12,0	1/1:7,0:7:9.50:149,10,0
chr10	37767364	.	AG	A	167.49	PASS	AB=0.898;AC=9;AF=0.173;AN=52;BaseQRankSum=0.048;DP=290;FS=5.580;HRun=9;HaplotypeScore=80.3316;InbreedingCoeff=0.3983;MQ=41.15;MQ0=14;MQRankSum=-2.904;QD=3.42;ReadPosRankSum=2.490;VQSLOD=-0.2740;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	0/0:4,0:4:8.55:0,9,56	0/0:27,0:3:5.99:0,6,55	0/0:35,0:7:12.03:0,12,129	0/0:10,5:15:5.32:0,5,14	0/0:9,0:8:3.81:0,4,20	0/0:11,0:10:0.94:0,1,1	0/0:18,0:13:16.96:0,17,64	1/1:4,4:8:9:82,9,0	0/0:9,0:8:17.51:0,18,126	0/0:10,0:10:2.51:0,3,7	0/1:2,0:8:0:0,0,0	./.	0/0:6,0:6:0.94:0,1,2	0/0:12,0:11:5.59:0,6,26	0/1:7,2:9:9.09:94,0,9	0/1:6,1:6:6.32:22,0,6	0/0:5,0:4:7.97:0,8,40	0/0:6,0:6:9.91:0,10,59	0/0:4,0:4:1.55:0,2,4	0/0:9,0:9:1.82:0,2,5	0/0:14,0:12:5.03:0,5,18	0/0:3,0:3:2.98:0,3,21	0/0:5,0:9:2.44:0,2,20	0/0:7,0:7:4.50:0,4,22	1/1:8,0:8:12.57:73,13,0	0/0:11,0:11:20.06:0,20,135	1/1:6,1:6:9.04:26,9,0
chr10	37767372	.	G	GA	1201.84	PASS	AB=0.930;AC=36;AF=0.643;AN=56;BaseQRankSum=3.577;DP=338;FS=20.556;HRun=0;HaplotypeScore=96.5160;InbreedingCoeff=0.2332;MQ=41.22;MQ0=15;MQRankSum=-2.278;QD=4.66;ReadPosRankSum=-1.265;VQSLOD=1.6453;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,2:11:2.79:18,3,0	0/1:2,0:3:5.31:5,0,36	0/0:23,0:3:8.89:0,9,71	0/0:28,0:5:12.03:0,12,129	1/1:9,7:15:9.89:62,10,0	1/1:8,0:10:2.02:21,2,0	1/1:13,0:12:5.63:44,6,0	0/1:21,0:14:20.82:52,0,21	1/1:5,5:10:11.97:101,12,0	0/1:14,0:12:48.25:92,0,48	1/1:9,0:10:1.23:5,1,0	0/0:8,0:8:5.99:0,6,49	1/1:5,0:5:3:25,3,0	0/0:8,0:8:4.37:0,4,21	0/1:13,0:12:8.88:21,0,9	1/1:5,8:12:17.71:162,18,0	1/1:5,6:10:10.34:69,10,0	0/1:4,0:5:1.51:2,0,9	0/1:8,0:8:14.84:15,0,15	1/1:3,0:5:2.04:6,2,0	0/1:15,0:15:0.72:20,0,1	1/1:16,0:17:7.97:50,8,0	0/0:5,0:4:5.76:0,6,31	0/0:8,0:8:5.33:0,5,36	1/1:8,0:10:7.85:88,8,0	1/1:5,9:13:32.06:312,32,0	0/1:14,0:15:24.78:25,0,31	1/1:7,3:8:19.55:173,20,0
chr10	37767407	.	G	GAGAGAA	3795.61	PASS	AB=1.000;AC=24;AF=0.429;AN=56;BaseQRankSum=8.127;DP=415;FS=8.486;HRun=0;HaplotypeScore=110.2296;InbreedingCoeff=0.1100;MQ=58.54;MQ0=9;MQRankSum=-7.689;QD=13.90;ReadPosRankSum=0.493;VQSLOD=1.8590;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:16:23.85:0,24,180	0/1:2,0:2:18.93:72,0,19	0/0:17,0:12:26.95:0,27,288	0/0:19,0:11:20.82:0,21,192	1/1:9,3:12:14.96:233,15,0	0/1:18,0:16:99:104,0,109	0/0:22,0:21:23.44:0,23,179	0/1:28,0:27:99:128,0,450	1/1:7,0:6:5.94:41,6,0	0/1:20,0:19:99:195,0,205	0/0:9,0:9:5.04:0,5,67	0/0:10,0:10:11.91:0,12,148	0/1:8,0:8:16.81:17,0,32	0/0:9,0:9:8.99:0,9,79	0/1:14,0:13:12.91:120,0,13	1/1:13,0:14:26.93:398,27,0	1/1:13,0:14:23.46:267,23,0	0/1:9,0:9:41.41:41,0,97	0/1:16,0:15:99:171,0,183	0/0:10,0:10:11.98:0,12,99	0/1:33,0:33:0.44:0,0,322	0/1:13,0:12:47.20:73,0,47	0/0:8,0:7:20.90:0,21,213	0/0:18,0:16:29.86:0,30,276	0/1:11,0:11:78.31:177,0,78	1/1:18,1:22:62.41:841,62,0	0/1:15,0:14:72.22:310,0,72	1/1:11,3:14:35.89:605,36,0
chr10	37767708	.	TTG	T	363.76	PASS	AB=1.000;AC=30;AF=0.750;AN=40;BaseQRankSum=-0.794;DP=132;FS=6.592;HRun=0;HaplotypeScore=32.2246;InbreedingCoeff=0.4518;MQ=92.29;MQ0=2;MQRankSum=-2.844;QD=4.60;ReadPosRankSum=-0.553;VQSLOD=0.2098;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:36.04:0,36,469	1/1:2,0:2:3:25,3,0	0/0:13,0:11:20.66:0,21,338	0/0:12,0:8:21.02:0,21,278	1/1:11,0:11:5.85:42,6,0	1/1:2,0:2:5.99:49,6,0	0/1:1,0:1:0:0,0,0	1/1:8,0:8:5.60:45,6,0	1/1:7,0:7:5.98:46,6,0	1/1:2,0:2:5.96:47,6,0	./.	./.	1/1:3,0:3:2.99:24,3,0	1/1:2,0:2:3:25,3,0	1/1:3,0:3:2.99:24,3,0	0/0:3,0:3:0.47:0,0,1	1/1:12,0:12:2.97:20,3,0	1/1:0,11:11:3:25,3,0	./.	0/1:2,0:2:0:0,0,0	./.	./.	./.	./.	1/1:2,0:2:5.99:48,6,0	./.	1/1:3,0:3:5.99:48,6,0	1/1:8,0:8:2.88:20,3,0
chr10	37767710	.	GTGTATATATGTATGTATATATATATATATA	G	1454.21	PASS	AB=0.500;AC=33;AF=0.825;AN=40;BaseQRankSum=-3.294;DP=119;FS=3.600;HRun=0;HaplotypeScore=83.2009;InbreedingCoeff=0.3702;MQ=89.72;MQ0=2;MQRankSum=-2.396;QD=19.65;ReadPosRankSum=-0.586;VQSLOD=1.6695;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:35.91:0,36,307	1/1:1,0:1:3:25,3,0	0/0:11,0:9:19.81:0,20,330	0/0:12,0:8:18.53:0,19,323	0/1:0,1:10:21.71:302,0,22	1/1:2,0:2:5.99:49,6,0	1/1:1,0:1:3.01:49,3,0	1/1:6,0:6:18.01:252,18,0	1/1:6,0:6:9:119,9,0	1/1:2,0:2:5.96:47,6,0	./.	./.	1/1:2,0:2:6.01:74,6,0	1/1:2,0:2:5.99:50,6,0	1/1:2,0:2:2.99:24,3,0	1/1:3,0:3:3:25,3,0	1/1:0,11:11:3.01:241,3,0	1/1:11,0:11:3.01:75,3,0	./.	1/1:2,0:2:2.97:20,3,0	./.	./.	./.	./.	1/1:2,0:2:6.01:73,6,0	./.	1/1:3,0:3:5.99:48,6,0	1/1:0,0:8:2.93:114,3,0
chr10	37768686	.	T	TG	7236.76	PASS	AB=1.000;AC=34;AF=0.607;AN=56;BaseQRankSum=2.612;DP=656;FS=7.963;HRun=4;HaplotypeScore=95.5458;InbreedingCoeff=0.8597;MQ=76.86;MQ0=0;MQRankSum=-1.157;QD=17.69;ReadPosRankSum=0.196;VQSLOD=3.8208;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,108,1181	1/1:9,1:10:27.05:273,27,0	0/0:33,0:28:50.42:0,50,436	0/0:27,0:22:13.44:0,13,230	0/0:23,0:23:32.01:0,32,203	1/1:22,1:23:60.11:599,60,0	1/1:19,2:21:36.01:365,36,0	1/1:38,0:37:91.91:788,92,0	0/0:19,0:19:8.39:0,8,146	1/1:33,3:36:84.20:846,84,0	1/1:17,0:17:31.90:286,32,0	0/0:29,0:29:81.02:0,81,843	1/1:9,0:9:18.03:175,18,0	1/1:26,0:26:47.89:434,48,0	1/1:34,0:34:57.11:561,57,0	0/0:13,0:13:26.44:0,26,189	0/0:19,0:19:16.69:0,17,100	1/1:18,0:18:29.88:274,30,0	1/1:12,1:13:35.76:334,36,0	1/1:22,0:22:35.55:310,36,0	1/1:27,2:29:60.10:603,60,0	1/1:21,1:23:53.52:452,54,0	0/0:18,0:18:51.01:0,51,513	0/0:24,0:24:69.13:0,69,735	1/1:35,2:37:58.63:583,59,0	0/1:23,0:23:27.66:28,0,103	1/1:13,2:15:10.37:286,10,0	0/1:15,0:15:1.08:40,0,1
chr10	37768690	.	G	GGA	13147.13	PASS	AB=0.542;AC=38;AF=0.679;AN=56;BaseQRankSum=-9.550;DP=653;FS=8.426;HRun=0;HaplotypeScore=82.9536;InbreedingCoeff=0.6600;MQ=76.27;MQ0=0;MQRankSum=-0.642;QD=28.33;ReadPosRankSum=1.318;VQSLOD=6.2988;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,107,1592	1/1:1,8:10:27.02:478,27,0	0/0:30,0:26:61.69:0,62,534	0/0:25,0:21:42.81:0,43,353	0/1:2,0:23:0.74:190,0,1	1/1:2,23:26:56.26:1134,56,0	1/1:2,16:19:35.97:620,36,0	1/1:2,33:35:79.92:1310,80,0	0/1:3,0:18:29.02:155,0,29	1/1:5,27:35:87.72:1295,88,0	1/1:2,12:15:27.85:527,28,0	0/0:29,0:29:84.05:0,84,1162	1/1:0,10:10:17.87:359,18,0	1/1:1,24:27:45.93:838,46,0	1/1:1,33:35:57.20:1142,57,0	0/1:3,1:15:90.55:91,0,114	1/1:1,0:16:2.35:124,2,0	1/1:1,17:18:30.10:579,30,0	1/1:3,12:15:38.17:495,38,0	1/1:3,14:18:27.53:531,28,0	1/1:3,24:28:58.87:1023,59,0	1/1:2,18:24:56.84:799,57,0	0/0:18,0:18:41.14:0,41,660	0/0:24,0:25:72.15:0,72,1015	1/1:3,31:35:53.92:1041,54,0	0/1:4,0:25:12.34:12,0,155	1/1:3,9:16:3.64:405,4,0	0/0:3,0:22:20.75:0,21,94
chr10	37769212	.	T	TAC	8647.15	PASS	AB=0.557;AC=17;AF=0.304;AN=56;BaseQRankSum=-14.387;DP=787;FS=8.869;HRun=0;HaplotypeScore=105.2732;InbreedingCoeff=0.9170;MQ=71.26;MQ0=1;MQRankSum=1.232;QD=34.45;ReadPosRankSum=2.935;VQSLOD=7.2117;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:72.20:0,72,879	0/0:11,0:11:30.10:0,30,378	0/0:23,0:18:26.95:0,27,291	0/0:34,0:29:38.89:0,39,512	1/1:3,26:29:72.15:1196,72,0	0/0:24,0:24:48.15:0,48,606	0/0:38,0:39:90.08:0,90,1094	0/0:30,0:30:57.13:0,57,688	1/1:5,22:27:45.15:747,45,0	0/0:35,0:35:67.32:0,67,1147	0/0:14,0:14:33.11:0,33,416	1/1:7,31:38:14.63:1320,15,0	0/0:24,0:24:66.21:0,66,832	0/0:28,1:29:16.43:0,16,745	0/0:34,0:34:63.20:0,63,795	1/1:4,27:31:69.24:1146,69,0	0/1:7,26:34:10.04:894,0,10	0/0:32,0:32:84.22:0,84,1029	0/0:21,0:21:45.13:0,45,555	0/0:20,0:20:48.13:0,48,577	0/0:74,0:74:99:0,190,2340	0/0:19,0:19:42.12:0,42,517	1/1:3,18:21:42.14:692,42,0	1/1:7,23:31:66.22:1062,66,0	0/0:16,0:16:45.14:0,45,567	1/1:3,28:32:49.40:1300,49,0	0/0:27,0:27:63.20:0,63,794	1/1:1,7:8:18.06:290,18,0
chr10	37769384	.	T	TGC	1194.20	PASS	AB=0.548;AC=3;AF=0.054;AN=56;BaseQRankSum=-4.325;DP=730;FS=3.651;HRun=0;HaplotypeScore=130.0286;InbreedingCoeff=0.6479;MQ=75.67;MQ0=0;MQRankSum=-3.704;QD=32.28;ReadPosRankSum=-1.371;VQSLOD=5.3182;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,120,1644	0/0:13,0:13:33.11:0,33,461	0/0:17,0:17:42.09:0,42,539	0/0:25,0:25:66.22:0,66,903	0/0:20,0:20:54.18:0,54,755	0/0:20,0:20:57.18:0,57,781	0/0:37,0:37:99:0,111,1537	0/0:24,0:24:69.20:0,69,920	0/0:27,0:27:78.24:0,78,1059	0/0:31,0:31:87.28:0,87,1201	0/0:12,0:12:27.09:0,27,378	0/0:26,0:26:72.24:0,72,1006	0/0:28,0:28:81.26:0,81,1117	0/0:21,0:21:57.16:0,57,763	0/0:32,0:32:90.30:0,90,1260	0/0:25,0:25:72.24:0,72,1007	0/0:45,0:45:99:0,129,1805	0/0:38,0:37:99:0,111,1535	0/0:35,0:35:99:0,105,1464	0/0:12,0:12:33.08:0,33,427	0/0:54,0:54:99:0,151,2095	0/0:21,0:21:54.12:0,54,716	0/0:16,0:16:42.13:0,42,570	0/0:30,0:30:90.30:0,90,1260	0/0:16,0:16:33.08:0,33,427	0/1:4,18:23:23.93:832,0,24	0/0:27,0:27:69.22:0,69,950	1/1:3,11:14:27.09:468,27,0
chr10	37769752	.	GA	G	2982.38	PASS	AC=34;AF=0.654;AN=52;BaseQRankSum=2.968;DP=351;FS=15.461;HRun=8;HaplotypeScore=70.6950;InbreedingCoeff=0.8689;MQ=37.76;MQ0=34;MQRankSum=-3.914;QD=15.37;ReadPosRankSum=3.885;VQSLOD=2.3089;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:20:30.20:0,30,295	1/1:3,3:6:9.01:87,9,0	./.	./.	0/0:11,0:10:18.06:0,18,217	1/1:3,10:14:35.54:324,36,0	1/1:6,4:9:9:87,9,0	1/1:5,13:18:30.04:289,30,0	0/0:7,0:7:6.02:0,6,72	1/1:3,10:13:30.02:281,30,0	1/1:1,7:8:15.02:142,15,0	0/0:14,0:11:17.71:0,18,172	1/1:3,5:8:21.03:202,21,0	1/1:4,7:11:20.93:189,21,0	1/1:3,10:12:15.02:144,15,0	0/0:10,0:10:24.01:0,24,272	0/0:24,0:23:41.94:0,42,430	1/1:9,7:13:30.04:287,30,0	1/1:2,7:9:23.99:222,24,0	1/1:2,8:9:12.01:115,12,0	1/1:7,4:10:6.01:58,6,0	1/1:6,9:15:24.02:225,24,0	0/0:11,0:11:11.72:0,12,116	0/0:16,0:15:24.07:0,24,289	1/1:3,12:15:27.04:260,27,0	1/1:5,0:1:1.82:5,2,0	1/1:2,10:11:27.04:259,27,0	0/0:2,0:1:1.25:0,1,3
chr10	37769776	.	A	AC	217.02	PASS	AB=0.988;AC=14;AF=0.250;AN=56;BaseQRankSum=3.031;DP=533;FS=24.693;HRun=0;HaplotypeScore=91.5268;InbreedingCoeff=-0.1942;MQ=36.80;MQ0=73;MQRankSum=1.597;QD=1.23;ReadPosRankSum=-0.618;VQSLOD=0.2038;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:28:58.96:0,59,444	0/1:4,0:4:21.79:22,0,29	0/0:64,0:8:5.81:0,6,56	0/0:70,0:6:16.65:0,17,82	0/0:18,0:15:22.87:0,23,173	0/1:16,0:15:37.42:37,0,97	0/1:10,0:10:5.50:38,0,6	0/1:20,0:17:24.82:25,0,120	0/0:7,0:7:8.82:0,9,56	0/1:13,0:12:33.13:33,0,76	0/1:9,0:7:24.80:25,0,43	0/0:15,0:10:22.60:0,23,151	0/0:8,5:12:13:0,13,102	0/0:13,0:11:1.74:0,2,63	0/1:21,0:18:6.67:7,0,105	0/0:8,0:7:14.88:0,15,106	0/0:24,0:22:51.76:0,52,383	0/1:21,0:17:33.42:33,0,42	0/1:16,0:13:41.18:41,0,102	0/1:10,0:7:23.26:23,0,44	1/1:15,0:12:0.40:54,0,0	0/1:8,0:8:23.26:23,0,74	0/0:19,0:18:38.07:0,38,269	0/0:18,0:16:15.10:0,15,101	0/0:16,0:13:17.62:0,18,190	0/0:27,0:20:51.79:0,52,370	0/1:12,0:9:1.97:2,0,60	0/0:10,0:8:14.89:0,15,108
chr10	37769893	.	CG	C	10666.05	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=5.017;DP=564;FS=5.125;HRun=2;HaplotypeScore=88.2002;InbreedingCoeff=0.9884;MQ=71.53;MQ0=0;MQRankSum=-2.394;QD=32.92;ReadPosRankSum=3.133;VQSLOD=5.0054;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,109,1571	1/1:1,5:6:15.05:193,15,0	0/0:24,0:24:69.20:0,69,907	0/0:27,0:24:63:0,63,745	0/0:6,0:6:12.04:0,12,180	1/1:0,19:19:45.15:584,45,0	1/1:0,23:23:60.20:778,60,0	1/1:0,20:19:51.14:623,51,0	0/0:18,0:18:48.10:0,48,672	1/1:2,19:21:57.18:736,57,0	1/1:2,7:9:21.05:258,21,0	0/0:19,0:18:48.15:0,48,696	1/1:2,28:30:66.21:855,66,0	1/1:1,20:21:57.19:739,57,0	1/1:0,15:15:39.13:506,39,0	0/0:17,0:17:45.15:0,45,667	0/0:28,0:28:78.26:0,78,1162	1/1:3,24:26:66.21:854,66,0	1/1:1,12:13:36.09:450,36,0	1/1:0,8:8:18.06:233,18,0	1/1:2,62:64:99:2163,169,0	1/1:0,14:14:36.12:467,36,0	0/0:6,0:6:15.05:0,15,225	0/0:29,0:29:78.22:0,78,1143	1/1:1,16:17:45.10:565,45,0	0/0:19,1:20:21.16:0,21,751	1/1:0,17:17:51.17:661,51,0	0/0:7,0:7:21.07:0,21,314
chr10	37769962	.	TAC	T	12078.87	PASS	AB=0.926;AC=39;AF=0.696;AN=56;BaseQRankSum=17.284;DP=703;FS=7.304;HRun=0;HaplotypeScore=174.2501;InbreedingCoeff=0.9276;MQ=61.61;MQ0=0;MQRankSum=-1.301;QD=25.43;ReadPosRankSum=2.878;VQSLOD=5.7458;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:59,1:60:99:0,124,2615	1/1:3,7:10:21.05:253,21,0	0/0:32,0:28:63.20:0,63,1028	0/0:25,0:23:54.18:0,54,871	0/0:15,0:15:42.14:0,42,699	1/1:3,16:19:36.12:458,36,0	1/1:4,24:28:69.22:878,69,0	1/1:9,15:24:51.15:626,51,0	0/0:30,0:30:81.28:0,81,1338	1/1:2,15:17:45.14:572,45,0	1/1:0,12:12:24.08:306,24,0	1/1:2,21:23:51.16:648,51,0	1/1:7,19:26:51.15:635,51,0	1/1:3,28:30:72.21:902,72,0	1/1:2,27:28:54.17:687,54,0	0/0:21,0:21:60.21:0,60,1004	0/0:37,0:37:96.33:0,96,1598	1/1:6,20:26:60.19:764,60,0	1/1:6,10:16:33.10:409,33,0	1/1:3,14:17:29.82:368,30,0	1/1:15,66:81:99:2130,171,0	1/1:4,16:20:38.99:482,39,0	1/1:1,13:15:36.11:458,36,0	1/1:7,21:28:60.15:733,60,0	1/1:3,14:17:39.12:496,39,0	0/1:23,2:25:7.08:7,0,974	1/1:3,8:10:21.07:267,21,0	0/0:8,0:8:23.89:0,24,271
chr10	37772004	.	C	CCA	1072.32	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=1.609;DP=617;FS=0.000;HRun=0;HaplotypeScore=76.5998;InbreedingCoeff=0.9532;MQ=90.31;MQ0=0;MQRankSum=-3.963;QD=33.51;ReadPosRankSum=1.058;VQSLOD=5.6741;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,29:32:69.24:1167,69,0	0/0:9,0:9:21.07:0,21,272	0/0:25,0:24:54.16:0,54,684	0/0:27,0:26:61.45:0,61,715	0/0:10,0:10:27.07:0,27,336	0/0:18,0:18:39.07:0,39,472	0/0:31,0:31:69.21:0,69,877	0/0:25,0:25:48.14:0,48,598	0/0:23,0:23:63.16:0,63,785	0/0:21,0:21:57.17:0,57,725	0/0:18,0:18:47.93:0,48,622	0/0:28,0:28:81.26:0,81,1038	0/0:23,0:23:63.19:0,63,804	0/0:24,0:24:63.19:0,63,795	0/0:24,0:24:63.18:0,63,790	0/0:11,0:11:27.08:0,27,338	0/0:34,0:34:90.22:0,90,1118	0/0:22,0:22:48.13:0,48,590	0/0:27,0:27:63.07:0,63,748	0/0:10,0:10:21.06:0,21,259	0/0:58,0:58:99:0,153,1869	0/0:14,0:14:39.11:0,39,491	0/0:13,0:13:18.05:0,18,220	0/0:30,0:30:81.24:0,81,1020	0/0:15,0:15:45.14:0,45,571	0/0:23,0:23:54.15:0,54,673	0/0:18,0:18:51.14:0,51,631	0/0:4,0:4:12.03:0,12,141
chr10	37772796	.	CGTGT	C	3464.72	PASS	AB=0.813;AC=35;AF=0.648;AN=54;BaseQRankSum=2.548;DP=653;FS=11.226;HRun=0;HaplotypeScore=116.3617;InbreedingCoeff=0.3962;MQ=65.93;MQ0=25;MQRankSum=-2.808;QD=8.04;ReadPosRankSum=0.217;VQSLOD=1.5174;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:42.78:0,43,818	0/1:4,3:8:6.47:41,0,6	./.	0/0:55,0:28:3.01:0,3,41	0/0:7,0:9:17.80:0,18,297	1/1:11,4:17:15.02:176,15,0	1/1:29,7:40:20.60:401,21,0	1/1:18,0:16:8.95:101,9,0	0/0:12,0:21:12.04:0,12,219	1/1:14,5:19:12.03:169,12,0	0/1:8,0:8:0:0,0,0	0/1:16,0:22:8.78:122,0,9	1/1:7,4:11:9.03:140,9,0	0/1:8,4:12:55.99:173,0,56	0/1:23,2:31:80.41:95,0,80	0/0:17,0:20:11.72:0,12,231	0/0:22,0:35:36.11:0,36,653	1/1:15,9:23:18.06:282,18,0	0/1:26,1:27:6.49:39,0,6	1/1:5,3:8:6.02:94,6,0	1/1:48,5:55:5.56:223,6,0	1/1:7,10:19:21.06:283,21,0	1/1:10,0:11:3:28,3,0	0/1:22,0:33:9.99:31,0,10	1/1:13,4:18:18.05:260,18,0	1/1:12,2:15:9.02:120,9,0	1/1:12,8:21:27.08:403,27,0	1/1:4,7:11:18.06:282,18,0
chr10	37773793	.	T	TA	3584.45	PASS	AB=0.792;AC=42;AF=0.750;AN=56;BaseQRankSum=-1.803;DP=317;FS=0.714;HRun=12;HaplotypeScore=38.0783;InbreedingCoeff=0.4007;MQ=56.65;MQ0=15;MQRankSum=0.271;QD=15.52;ReadPosRankSum=0.486;VQSLOD=4.1027;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,22:27:51.08:496,51,0	1/1:4,4:8:16.83:147,17,0	0/0:47,0:8:13.34:0,13,70	0/0:20,0:8:0.18:0,0,59	0/1:4,4:8:3.90:118,0,4	1/1:8,5:12:26.87:243,27,0	1/1:1,8:9:18.03:175,18,0	1/1:8,15:20:38.90:363,39,0	1/1:0,2:2:6.01:58,6,0	1/1:4,3:7:9.01:88,9,0	0/1:2,5:7:3.93:118,0,4	0/1:4,1:5:20.14:20,0,33	1/1:0,3:3:9.01:88,9,0	1/1:1,3:4:6.01:58,6,0	1/1:3,3:5:9.01:87,9,0	1/1:2,4:6:6.01:58,6,0	1/1:2,12:13:27.04:261,27,0	1/1:4,12:15:30.05:291,30,0	0/1:4,4:8:4.58:76,0,5	1/1:3,2:5:6.01:58,6,0	1/1:0,2:2:5.93:46,6,0	1/1:3,3:6:9.01:88,9,0	0/1:2,0:2:3.76:4,0,16	0/0:7,0:7:17.90:0,18,131	1/1:3,9:11:27.04:263,27,0	0/1:19,0:19:1.66:2,0,239	1/1:3,15:18:39.06:379,39,0	0/0:10,0:8:14.89:0,15,109
chr10	37773843	.	G	GCT	455.62	PASS	AB=1.000;AC=29;AF=0.580;AN=50;BaseQRankSum=2.951;DP=256;FS=14.832;HRun=0;HaplotypeScore=63.4202;InbreedingCoeff=0.3897;MQ=89.86;MQ0=9;MQRankSum=-3.639;QD=3.67;ReadPosRankSum=0.388;VQSLOD=0.6430;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:11,8:19:21.05:322,21,0	1/1:5,0:5:2.19:5,2,0	0/0:31,0:19:23.75:0,24,321	0/0:49,0:29:48.30:0,48,612	0/1:4,0:4:7.41:7,0,27	1/1:9,0:7:3.48:45,3,0	1/1:7,0:7:2.92:24,3,0	1/1:17,0:15:3.01:47,3,0	0/0:2,0:2:3.01:0,3,37	0/1:9,0:8:3.61:4,0,7	1/1:13,0:12:5.58:34,6,0	1/1:2,0:2:2.37:8,2,0	./.	0/0:4,0:4:2.71:0,3,12	./.	1/1:1,0:1:1.82:5,2,0	0/1:9,0:9:1.47:1,0,82	1/1:6,0:8:6.65:55,7,0	1/1:4,0:2:2.84:9,3,0	./.	1/1:6,0:6:2.97:20,3,0	0/0:6,0:6:0.47:0,0,1	1/1:5,0:5:2.37:8,2,0	0/0:5,0:4:2.81:0,3,36	0/0:6,0:6:0.51:0,1,2	0/0:10,0:10:30.09:0,30,389	1/1:6,0:6:0.47:1,0,0	0/0:4,0:2:6.02:0,6,79
chr10	37773845	.	TCG	T	1151.47	PASS	AB=1.000;AC=26;AF=0.481;AN=54;BaseQRankSum=-2.616;DP=255;FS=0.662;HRun=0;HaplotypeScore=59.2259;InbreedingCoeff=0.4834;MQ=86.83;MQ0=9;MQRankSum=-2.177;QD=9.36;ReadPosRankSum=-0.128;VQSLOD=2.9284;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:17,2:19:12.19:157,12,0	1/1:3,2:5:8.84:66,9,0	0/0:30,0:16:14.91:0,15,260	0/0:48,0:28:30.15:0,30,519	0/0:4,0:4:8.70:0,9,57	0/1:9,0:7:7.51:8,0,14	1/1:7,1:8:17.84:132,18,0	1/1:17,0:15:43.19:358,43,0	0/0:2,0:2:2.94:0,3,18	0/1:9,0:8:1.81:108,0,2	1/1:11,2:12:7.12:94,7,0	0/0:2,0:2:3:0,3,27	1/1:2,2:3:3:25,3,0	0/1:4,0:4:5.02:5,0,12	1/1:4,0:4:2.22:7,2,0	0/0:1,0:1:3:0,3,28	0/0:9,0:9:14.57:0,15,95	1/1:7,1:8:12.30:119,12,0	1/1:5,0:3:3.94:34,4,0	./.	0/1:6,0:6:11.61:22,0,12	0/0:6,0:6:0.47:0,0,1	0/0:5,0:5:3:0,3,27	0/0:5,0:4:2.99:0,3,24	1/1:6,0:6:8.93:66,9,0	0/0:11,0:11:30.07:0,30,454	1/1:1,5:6:14.98:124,15,0	0/0:4,0:2:5.97:0,6,73
chr10	37773847	.	G	GCTCGCTCTCTCTCTCTCT	2331.27	PASS	AB=1.000;AC=28;AF=0.519;AN=54;BaseQRankSum=-0.154;DP=261;FS=8.894;HRun=0;HaplotypeScore=113.3196;InbreedingCoeff=-0.0997;MQ=86.09;MQ0=9;MQRankSum=-2.485;QD=17.02;ReadPosRankSum=-1.282;VQSLOD=1.5613;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:26.74:0,27,445	0/1:5,0:5:38.79:332,0,39	0/0:30,0:16:17.81:0,18,354	0/0:50,0:29:13.92:0,14,810	1/1:2,0:4:5.88:36,6,0	1/1:10,0:8:6.48:106,6,0	0/1:8,0:8:22.06:22,0,71	0/1:16,0:14:12.93:13,0,285	1/1:2,0:2:2.92:17,3,0	0/1:9,0:8:99:322,0,110	0/1:13,0:12:59.35:185,0,59	1/1:0,1:1:3.01:260,3,0	0/0:3,0:2:3:0,3,25	0/1:4,0:4:18.95:19,0,19	0/0:4,0:4:2.96:0,3,19	1/1:0,0:4:3.01:47,3,0	1/1:6,0:8:8.30:70,8,0	0/1:8,0:8:99:309,0,108	0/1:7,0:5:14.01:194,0,14	./.	0/1:6,0:6:18.66:19,0,19	0/1:6,0:6:14.94:179,0,15	1/1:0,5:6:3.01:260,3,0	1/1:5,0:4:2.90:20,3,0	0/0:6,0:6:8.91:0,9,63	0/1:11,0:11:67.89:68,0,690	0/0:5,0:5:14.98:0,15,125	0/1:4,0:2:13.98:14,0,117
chr10	37774506	.	AGTGTGTGTGTGTGTGTGTGT	A	6532.86	PASS	AB=0.818;AC=33;AF=0.635;AN=52;BaseQRankSum=2.268;DP=511;FS=8.073;HRun=0;HaplotypeScore=250.8609;InbreedingCoeff=0.5041;MQ=61.10;MQ0=14;MQRankSum=-3.665;QD=21.56;ReadPosRankSum=0.650;VQSLOD=2.2980;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:42:39.13:0,39,2810	1/1:0,4:4:8.99:296,9,0	./.	./.	0/0:20,0:29:17.43:0,17,179	1/1:15,5:22:18.02:737,18,0	1/1:8,0:8:3.01:71,3,0	1/1:31,0:30:6:76,6,0	0/1:8,0:15:99:170,0,100	0/0:18,0:18:0:0,0,0	1/1:13,2:14:3.01:38,3,0	0/0:7,0:11:14.98:0,15,263	1/1:13,5:18:15.05:790,15,0	1/1:12,4:16:6.02:319,6,0	1/1:7,9:16:20.90:816,21,0	1/1:14,0:18:9.03:178,9,0	1/1:7,0:9:6.02:159,6,0	0/1:16,3:18:99:150,0,382	0/1:18,2:19:14.92:153,0,15	1/1:11,9:21:18.01:430,18,0	1/1:18,7:24:2.97:20,3,0	1/1:7,6:13:15:525,15,0	0/0:10,0:24:20.37:0,20,492	0/0:14,0:13:2.97:0,3,20	1/1:4,1:5:3.01:159,3,0	0/0:16,0:18:21.05:0,21,664	1/1:16,9:26:30.09:1444,30,0	0/0:7,0:6:9.03:0,9,394
chr10	37775135	.	CTT	C	2097.41	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=3.598;DP=522;FS=4.388;HRun=12;HaplotypeScore=68.2520;InbreedingCoeff=0.9226;MQ=65.39;MQ0=5;MQRankSum=0.660;QD=23.30;ReadPosRankSum=4.500;VQSLOD=3.5647;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:27:65.58:0,66,856	0/0:3,0:3:9.03:0,9,134	0/0:19,0:11:17.98:0,18,195	0/0:21,0:9:3.07:0,3,47	1/1:4,18:22:51.07:518,51,0	0/0:16,0:18:45.52:0,46,623	0/0:16,0:17:42.05:0,42,561	0/0:31,0:32:69.56:0,70,900	1/1:0,14:14:39.09:397,39,0	0/0:16,0:16:33.10:0,33,472	0/0:15,0:17:43.91:0,44,543	0/0:1,0:16:32.19:0,32,113	0/0:11,0:11:29.95:0,30,396	0/0:10,0:10:21.07:0,21,313	0/0:13,0:14:37.12:0,37,476	1/1:0,19:19:51.12:519,51,0	1/1:4,31:35:81.17:824,81,0	0/0:24,0:28:72.16:0,72,927	0/0:15,0:17:44.54:0,45,583	0/0:26,0:31:78.12:0,78,1021	0/0:19,0:20:45.13:0,45,622	0/0:10,0:10:18.06:0,18,267	0/0:1,0:14:23.78:0,24,91	0/0:6,0:21:29.94:0,30,105	0/0:5,0:5:11.06:0,11,121	0/0:5,0:18:48.65:0,49,448	0/0:18,0:17:45.13:0,45,646	0/0:3,0:20:33.04:0,33,313
chr10	37775643	.	C	CTCTTTCTT	8081.68	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-2.199;DP=584;FS=0.000;HRun=0;HaplotypeScore=200.6849;InbreedingCoeff=0.4258;MQ=44.04;MQ0=9;MQRankSum=-0.297;QD=15.88;ReadPosRankSum=0.454;VQSLOD=3.6255;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:24:16.39:236,16,0	1/1:14,0:14:17.92:216,18,0	0/0:34,0:11:2.11:0,2,29	0/0:41,0:17:0:0,0,22	1/1:25,0:25:7.30:55,7,0	1/1:19,0:19:3.06:28,3,0	1/1:14,0:13:15.01:182,15,0	1/1:50,0:50:76.97:631,77,0	1/1:22,0:22:10.50:97,11,0	1/1:18,0:17:8.94:121,9,0	1/1:25,0:25:35.78:336,36,0	1/1:11,0:11:6.84:121,7,0	1/1:11,0:11:17.86:134,18,0	1/1:15,0:15:26.82:235,27,0	1/1:15,0:15:29.83:275,30,0	1/1:18,0:18:6.41:89,6,0	1/1:22,0:21:30.08:724,30,0	1/1:18,0:18:18.02:229,18,0	1/1:21,0:20:26.88:301,27,0	1/1:23,0:23:20.89:291,21,0	1/1:2,0:2:3.01:73,3,0	1/1:16,0:16:14.81:155,15,0	1/1:17,0:17:12.48:258,12,0	1/1:20,0:20:23.55:359,24,0	1/1:22,0:22:20.88:243,21,0	1/1:15,12:27:39.13:1403,39,0	1/1:26,0:26:44.86:570,45,0	1/1:9,5:14:18.06:720,18,0
chr10	37776192	.	T	TTTC	2840.28	PASS	AB=0.855;AC=32;AF=0.571;AN=56;BaseQRankSum=1.653;DP=414;FS=34.579;HRun=0;HaplotypeScore=59.5106;InbreedingCoeff=0.4955;MQ=45.30;MQ0=16;MQRankSum=0.975;QD=10.37;ReadPosRankSum=5.664;VQSLOD=1.3951;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:11:18.38:0,18,93	0/1:1,0:6:2.11:69,0,2	0/0:16,0:4:1.90:0,2,67	0/1:18,0:7:0.35:0,0,32	0/0:19,0:18:20.72:0,21,127	1/1:5,12:16:14.28:188,14,0	1/1:3,9:17:11.87:146,12,0	1/1:14,1:17:1.09:224,1,0	0/0:11,0:11:10.83:0,11,72	0/1:6,13:19:15.89:153,0,16	1/1:2,11:12:8.13:110,8,0	0/0:12,0:12:23.75:0,24,141	1/1:8,0:8:2.68:55,3,0	1/1:13,0:12:9.89:217,10,0	1/1:16,2:20:49.98:589,50,0	0/0:12,0:12:12.54:0,13,72	0/0:17,0:16:10.61:0,11,61	1/1:10,2:12:13.51:204,14,0	1/1:5,1:8:12.92:163,13,0	1/1:3,14:21:15.61:147,16,0	1/1:0,6:8:9.03:160,9,0	1/1:7,1:8:14.96:204,15,0	0/1:17,0:17:22.89:23,0,96	0/1:18,0:17:4.75:5,0,31	0/1:14,0:14:32.55:158,0,33	0/0:17,0:17:41.30:0,41,274	1/1:14,1:14:8.06:216,8,0	0/0:24,0:21:38.28:0,38,258
chr10	37777756	.	G	GCCC	3960.41	PASS	AB=0.750;AC=52;AF=0.929;AN=56;BaseQRankSum=-3.374;DP=251;FS=15.706;HRun=7;HaplotypeScore=37.7624;InbreedingCoeff=0.3431;MQ=76.14;MQ0=0;MQRankSum=-3.804;QD=16.23;ReadPosRankSum=3.000;VQSLOD=-0.3465;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,0:11:11.96:93,12,0	0/1:0,3:3:0:0,0,0	0/1:11,0:11:2.37:2,0,122	0/0:7,0:6:14.94:0,15,150	1/1:1,1:2:3.01:62,3,0	1/1:1,4:5:5.89:77,6,0	1/1:2,14:17:14.54:257,15,0	1/1:3,1:4:6.01:88,6,0	1/1:8,0:8:9.45:109,9,0	1/1:8,0:9:13.52:103,14,0	1/1:4,0:4:5.95:80,6,0	1/1:9,1:10:15.04:274,15,0	1/1:5,4:9:16.24:272,16,0	1/1:5,7:12:15.03:272,15,0	1/1:7,3:10:20.34:260,20,0	1/1:7,0:7:14.89:111,15,0	1/1:2,22:26:42.10:793,42,0	1/1:2,11:14:15.05:311,15,0	1/1:3,1:4:5.95:80,6,0	1/1:2,2:4:2.97:20,3,0	1/1:5,9:16:6:85,6,0	1/1:7,0:7:4.25:30,4,0	1/1:0,3:4:3.01:40,3,0	1/1:4,9:16:12.04:216,12,0	1/1:2,1:3:2.97:20,3,0	1/1:1,0:8:9.18:42,9,0	1/1:2,8:11:12.04:249,12,0	1/1:0,0:9:5.87:14,6,0
chr10	37778835	.	A	AG	20861.37	PASS	AB=0.923;AC=43;AF=0.768;AN=56;BaseQRankSum=-3.940;DP=622;FS=5.606;HRun=0;HaplotypeScore=64.0363;InbreedingCoeff=0.8984;MQ=89.16;MQ0=0;MQRankSum=-6.631;QD=41.15;ReadPosRankSum=2.980;VQSLOD=5.6135;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,44:44:99:2012,126,0	1/1:0,9:9:21.07:335,21,0	0/0:31,0:31:93.25:0,93,1183	0/0:18,0:18:50.80:0,51,633	1/1:0,26:26:69.23:1099,69,0	1/1:1,26:27:72.24:1149,72,0	1/1:0,21:21:60.20:958,60,0	1/1:0,30:30:90.28:1394,90,0	1/1:0,25:25:63.21:1004,63,0	1/1:2,26:28:78.25:1224,78,0	1/1:0,16:16:39.13:611,39,0	0/0:24,0:24:69.23:0,69,965	1/1:0,18:18:45.15:719,45,0	1/1:1,16:17:45.15:718,45,0	1/1:1,18:19:54.18:861,54,0	1/1:1,20:21:57.19:911,57,0	1/1:0,13:13:33.11:527,33,0	1/1:0,23:23:66.18:1027,66,0	1/1:2,13:15:39.09:589,39,0	1/1:0,22:22:66.23:1051,66,0	1/1:1,46:47:99:2109,132,0	1/1:0,12:12:24.08:383,24,0	0/0:16,0:16:48.16:0,48,670	0/0:18,0:18:51.17:0,51,713	1/1:0,19:19:57.19:907,57,0	0/1:22,2:24:26.75:27,0,783	1/1:1,30:31:78.27:1244,78,0	0/0:8,0:8:24.08:0,24,336
chr10	37778938	.	A	ATTTTG	16759.59	PASS	AB=0.967;AC=43;AF=0.768;AN=56;BaseQRankSum=-7.056;DP=553;FS=26.831;HRun=0;HaplotypeScore=103.3978;InbreedingCoeff=0.8929;MQ=68.95;MQ0=1;MQRankSum=-6.978;QD=40.00;ReadPosRankSum=2.141;VQSLOD=2.9537;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,0:16:24.08:453,24,0	1/1:6,4:10:15.05:409,15,0	0/0:31,0:25:23.87:0,24,596	0/0:30,0:22:35.16:0,35,561	1/1:14,8:22:42.13:1022,42,0	1/1:3,14:17:30.10:868,30,0	1/1:19,3:22:36.10:740,36,0	1/1:12,11:27:50.96:935,51,0	1/1:10,12:24:30.10:869,30,0	1/1:9,4:13:24.08:602,24,0	1/1:1,8:10:21.07:604,21,0	0/0:15,0:15:42.14:0,42,789	1/1:12,7:19:45.15:1140,45,0	1/1:2,9:11:24.08:695,24,0	1/1:7,17:25:36.12:1042,36,0	1/1:9,9:18:45.11:1140,45,0	1/1:17,10:27:51.07:1161,51,0	1/1:14,3:17:27.02:557,27,0	1/1:17,3:20:25.10:589,25,0	1/1:9,6:15:33.11:811,33,0	1/1:4,15:20:21.07:582,21,0	1/1:3,10:15:23.97:624,24,0	0/0:16,0:16:36.11:0,36,638	0/0:23,0:23:63.20:0,63,1137	1/1:3,19:22:39.13:1128,39,0	0/1:28,1:29:26.83:27,0,943	1/1:14,6:20:30.10:762,30,0	0/0:18,0:18:49.08:0,49,943
chr10	37778956	.	T	TTG	3404.91	PASS	AB=0.985;AC=22;AF=0.393;AN=56;BaseQRankSum=13.545;DP=541;FS=50.745;HRun=0;HaplotypeScore=121.3705;InbreedingCoeff=-0.4495;MQ=62.59;MQ0=1;MQRankSum=-5.191;QD=9.23;ReadPosRankSum=8.206;VQSLOD=0.6050;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:15,0:15:99:106,0,221	0/1:10,0:10:74.96:75,0,145	0/0:32,0:25:61.18:0,61,790	0/0:32,0:23:58.02:0,58,821	0/1:22,0:22:99:210,0,261	0/1:16,0:16:13.68:131,0,14	0/1:15,1:16:99:250,0,117	0/1:26,0:26:99:226,0,595	0/1:20,0:20:99:123,0,199	0/1:16,1:17:99:194,0,343	1/1:8,0:8:20.01:106,20,0	0/0:23,0:23:69.21:0,69,1014	0/1:17,0:17:42.67:309,0,43	0/1:10,0:10:19.51:103,0,20	0/1:24,0:24:99:142,0,213	0/1:18,2:20:99:232,0,175	0/1:24,0:24:99:229,0,223	0/1:8,1:9:0.87:178,0,1	0/1:20,0:21:99:118,0,392	0/1:22,0:22:99:176,0,374	0/1:19,0:19:99:109,0,108	0/1:17,0:17:72.63:73,0,252	0/0:14,0:14:42.13:0,42,614	0/0:27,0:27:75.24:0,75,1126	0/1:20,0:20:90.70:163,0,91	0/0:24,0:24:56.02:0,56,995	0/1:16,0:16:99:154,0,138	0/0:20,0:20:56.40:0,56,831
chr10	37779031	.	AG	A	4614.32	PASS	AB=0.701;AC=21;AF=0.375;AN=56;BaseQRankSum=10.981;DP=577;FS=241.284;HRun=1;HaplotypeScore=102.6620;InbreedingCoeff=-0.5999;MQ=52.27;MQ0=0;MQRankSum=-9.773;QD=11.04;ReadPosRankSum=-4.420;VQSLOD=0.2351;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:8,7:15:99:190,0,196	0/1:10,7:17:99:140,0,432	0/0:23,0:19:57.17:0,57,886	0/0:21,0:17:48.16:0,48,750	0/1:9,13:22:99:346,0,359	0/1:14,6:19:99:174,0,429	0/1:19,12:31:99:351,0,786	0/1:11,19:30:99:566,0,433	0/1:21,6:26:99:157,0,696	0/1:11,13:24:99:411,0,453	0/1:2,11:13:26.55:202,0,27	0/0:22,0:22:66.21:0,66,1032	0/1:5,8:13:99:257,0,176	0/1:4,14:18:99:295,0,151	0/1:18,7:25:99:160,0,652	0/1:6,10:16:99:289,0,241	0/1:14,3:17:78.23:78,0,350	0/1:4,6:10:99:125,0,139	0/1:12,7:18:99:207,0,421	0/1:19,7:26:99:189,0,672	0/1:10,3:11:47.24:47,0,295	0/1:11,4:15:74.80:75,0,384	0/0:19,0:19:57.16:0,57,861	0/0:39,0:39:99:0,117,1839	0/1:10,10:20:99:174,0,429	0/0:26,0:26:75.24:0,75,1156	0/1:18,9:27:99:184,0,760	0/0:9,0:9:27.09:0,27,432
chr10	37779536	.	G	GACACAC	590.98	PASS	AB=0.719;AC=5;AF=0.50;AN=10;BaseQRankSum=-3.799;DP=147;FS=2.017;HRun=0;HaplotypeScore=151.9569;MQ=84.41;MQ0=7;MQRankSum=-0.608;QD=7.58;ReadPosRankSum=0.532;VQSLOD=2.6285;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	0/1:14,6:23:5.94:274,0,6	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	1/1:7,2:12:3.01:97,3,0	1/1:20,9:42:11.73:302,12,0	./.	0/0:10,0:15:10.28:0,10,129	./.	0/0:0,0:6:12.02:0,12,149
chr10	37779848	.	C	CCT	2017.92	PASS	AB=0.985;AC=25;AF=0.463;AN=54;BaseQRankSum=-5.080;DP=358;FS=17.758;HRun=0;HaplotypeScore=110.5736;InbreedingCoeff=0.4536;MQ=54.42;MQ0=15;MQRankSum=3.584;QD=8.10;ReadPosRankSum=3.654;VQSLOD=2.1656;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,0:8:0.47:1,0,0	0/1:3,0:3:0.76:2,0,1	0/0:47,0:11:14.49:0,14,152	0/1:58,0:18:7.66:8,0,179	0/0:6,0:6:4.78:0,5,31	0/1:3,0:3:0:0,0,0	0/0:12,0:12:4.28:0,4,17	0/0:2,0:2:1.74:0,2,34	0/1:8,0:9:2.43:10,0,2	0/0:9,0:8:13.73:0,14,53	0/1:6,0:6:0:0,0,0	1/1:10,16:29:38.88:600,39,0	0/0:7,0:7:5.35:0,5,19	0/1:9,0:9:0:1,0,0	0/1:9,0:9:0.01:1,0,0	0/0:6,0:9:0.44:0,0,28	0/1:3,0:3:0:0,0,0	0/1:1,0:1:0:0,0,0	0/0:5,0:5:6.10:0,6,25	./.	0/1:9,0:8:0:0,0,0	0/1:7,0:7:0:0,0,0	1/1:4,8:13:14.92:212,15,0	1/1:6,21:27:45.15:726,45,0	1/1:14,0:14:1.72:5,2,0	1/1:6,1:23:50.92:431,51,0	0/0:9,0:9:7.49:0,7,43	1/1:3,0:16:17.99:157,18,0
chr10	37779863	.	CTCCTT	C	1253.24	PASS	AB=0.970;AC=22;AF=0.407;AN=54;BaseQRankSum=1.515;DP=455;FS=22.768;HRun=0;HaplotypeScore=108.9892;InbreedingCoeff=-0.0071;MQ=52.17;MQ0=28;MQRankSum=-3.742;QD=5.75;ReadPosRankSum=-0.508;VQSLOD=0.3653;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:12:1:48,1,0	0/1:8,0:8:45.40:142,0,45	0/0:56,0:12:27.45:0,27,458	0/0:65,0:21:27.09:0,27,481	0/0:7,0:7:4.33:0,4,24	0/1:7,1:7:1.40:28,0,1	1/1:17,1:17:0.22:63,0,0	0/1:17,0:13:99:225,0,127	0/0:10,0:9:16.38:0,16,121	0/1:14,0:13:34.94:177,0,35	0/1:10,0:10:0.26:1,0,0	0/0:29,0:29:51.88:0,52,1049	0/1:10,2:12:11.87:139,0,12	1/1:13,0:13:5.68:50,6,0	1/1:12,0:12:2.74:32,3,0	0/0:9,0:9:10.78:0,11,51	0/1:4,0:4:30.96:31,0,32	0/1:4,0:4:4.10:62,0,4	0/1:7,0:7:2.22:97,0,2	./.	0/1:10,1:9:0:0,0,0	0/0:16,1:15:4.31:0,4,14	0/0:12,0:12:21.96:0,22,434	0/0:25,0:25:54.18:0,54,1228	0/1:20,0:19:16.25:63,0,16	0/1:21,0:20:99:119,0,559	0/1:10,1:11:3.29:115,0,3	0/1:15,0:15:9.21:9,0,373
chr10	37779865	.	CCTT	C	2587.36	PASS	AB=0.727;AC=24;AF=0.429;AN=56;BaseQRankSum=-2.011;DP=453;FS=26.662;HRun=0;HaplotypeScore=99.0950;InbreedingCoeff=0.0699;MQ=54.96;MQ0=28;MQRankSum=-3.875;QD=11.40;ReadPosRankSum=-0.037;VQSLOD=1.6063;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,1:12:0.88:49,1,0	0/1:5,4:9:50.23:174,0,50	0/0:54,0:11:26.82:0,27,418	0/0:65,0:23:22.74:0,23,507	0/0:7,0:8:5.22:0,5,27	0/1:5,3:7:1.48:99,0,1	1/1:8,9:16:0.97:154,1,0	0/1:14,4:14:99:261,0,118	0/0:8,0:9:16.37:0,16,119	0/1:5,10:15:22.74:532,0,23	0/1:4,6:10:0.26:1,0,0	0/0:24,0:24:51.87:0,52,799	0/1:7,7:14:9.83:272,0,10	1/1:3,11:14:8.72:178,9,0	1/1:3,9:12:2.72:101,3,0	0/0:6,0:9:10.77:0,11,47	0/1:2,1:4:30.96:31,0,32	0/1:1,3:4:12.24:97,0,12	0/1:2,5:7:3.28:256,0,3	0/1:4,3:6:0:0,0,0	0/1:2,8:8:0:0,0,0	0/0:6,11:15:4.19:0,4,13	0/0:11,0:11:24.82:0,25,341	0/0:28,0:28:63.19:0,63,996	0/1:15,4:19:1.24:78,0,1	0/1:19,0:18:94.35:94,0,411	1/1:2,9:11:3.93:354,4,0	0/1:15,0:15:6.22:6,0,309
chr10	37779928	.	T	TG	16428.38	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=-5.838;DP=564;FS=9.160;HRun=1;HaplotypeScore=71.9671;InbreedingCoeff=0.9984;MQ=71.42;MQ0=2;MQRankSum=-5.402;QD=39.40;ReadPosRankSum=1.013;VQSLOD=5.1419;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,27:28:69.23:1033,69,0	1/1:1,15:16:45.12:650,45,0	0/0:21,0:21:60.18:0,60,730	0/0:17,0:18:22.16:0,22,392	1/1:0,13:13:36.08:513,36,0	1/1:0,21:21:57.19:849,57,0	1/1:1,28:29:78.22:1144,78,0	1/1:2,21:23:60.19:872,60,0	1/1:0,22:22:66.19:963,66,0	1/1:1,14:16:45.15:667,45,0	1/1:1,7:8:20.94:238,21,0	0/0:22,0:22:60.20:0,60,779	1/1:1,18:19:54.10:754,54,0	1/1:1,23:24:66.22:983,66,0	1/1:2,26:28:75.21:1096,75,0	1/1:0,11:11:33.11:493,33,0	1/1:1,19:20:54.18:809,54,0	1/1:0,14:14:30.10:449,30,0	1/1:1,17:18:54.08:774,54,0	1/1:0,15:15:33.11:494,33,0	1/1:1,29:31:72.24:1078,72,0	1/1:3,19:20:60.16:863,60,0	0/0:17,0:17:48.09:0,48,576	0/0:29,0:29:87.28:0,87,1129	1/1:1,21:22:63.21:942,63,0	0/0:24,0:24:69.21:0,69,872	1/1:0,17:16:51.17:764,51,0	0/0:16,0:16:33.11:0,33,428
chr10	37780358	.	GA	G	3954.76	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-10.606;DP=629;FS=2.995;HRun=1;HaplotypeScore=99.0260;InbreedingCoeff=0.9979;MQ=89.04;MQ0=0;MQRankSum=-1.855;QD=34.69;ReadPosRankSum=3.128;VQSLOD=3.7346;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,102,1472	0/0:11,0:11:19.13:0,19,442	0/0:30,0:30:90.26:0,90,1270	0/0:22,0:22:49.70:0,50,824	0/0:16,0:16:39:0,39,555	0/0:17,0:17:51.12:0,51,679	0/0:30,0:30:90.26:0,90,1309	0/0:27,0:27:81.24:0,81,1132	0/0:19,0:19:51.13:0,51,765	0/0:18,0:18:51.13:0,51,742	0/0:11,0:11:30.02:0,30,408	1/1:0,21:21:51.17:712,51,0	0/0:18,0:18:54.16:0,54,794	0/0:22,0:22:60.16:0,60,914	0/0:32,0:32:93.26:0,93,1372	0/0:23,0:23:69.15:0,69,913	0/0:34,0:34:99:0,102,1555	0/0:27,0:27:81.25:0,81,1185	0/0:17,0:17:51.15:0,51,725	0/0:9,0:9:27.03:0,27,358	0/0:47,0:47:99:0,138,2012	0/0:18,0:18:51.17:0,51,764	1/1:0,20:20:51.17:708,51,0	1/1:0,41:41:90.30:1257,90,0	0/0:19,0:19:54.08:0,54,741	1/1:0,22:22:66.19:901,66,0	0/0:13,0:13:39.11:0,39,574	1/1:0,10:10:27.09:377,27,0
chr10	37780683	.	T	TACACACAC	1763.05	PASS	AC=10;AF=1.00;AN=10;DP=152;FS=0.000;HRun=0;HaplotypeScore=78.3452;MQ=62.89;MQ0=12;QD=18.96;VQSLOD=1.5614;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	1/1:21,0:21:12.04:391,12,0	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	1/1:17,0:16:9.01:141,9,0	1/1:24,0:22:11.71:271,12,0	./.	1/1:13,6:20:33.09:746,33,0	./.	1/1:11,0:11:12:285,12,0
chr10	37780719	.	A	AAAC	286.80	PASS	AC=6;AF=0.429;AN=14;BaseQRankSum=1.740;DP=191;FS=3.078;HRun=0;HaplotypeScore=115.4966;MQ=48.07;MQ0=11;MQRankSum=-2.970;QD=4.28;ReadPosRankSum=1.160;VQSLOD=2.1347;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:36,0:10:16.26:0,16,217	0/0:46,0:10:23.99:0,24,304	./.	./.	./.	./.	./.	./.	./.	1/1:7,17:25:10.53:127,11,0	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	1/1:8,0:15:6:85,6,0	1/1:13,13:25:16.28:171,16,0	./.	0/0:26,0:25:59.75:0,60,759	./.	0/0:11,0:11:3.01:0,3,42
chr10	37781189	.	CG	C	9084.63	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=3.657;DP=407;FS=136.712;HRun=1;HaplotypeScore=93.9713;InbreedingCoeff=0.9681;MQ=74.28;MQ0=0;MQRankSum=-10.894;QD=34.94;ReadPosRankSum=3.705;VQSLOD=-0.7287;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,39:39:99:1383,99,0	1/1:0,4:4:6.02:84,6,0	0/0:26,0:26:78.15:0,78,1147	0/0:20,0:20:38.19:0,38,703	1/1:0,9:9:21.07:293,21,0	1/1:0,11:11:27.09:377,27,0	1/1:0,15:15:39.09:522,39,0	1/1:0,21:21:63.21:881,63,0	1/1:0,14:14:42.14:585,42,0	1/1:0,13:13:39.13:545,39,0	1/1:0,10:10:18.06:251,18,0	0/0:28,0:28:78.24:0,78,1200	1/1:0,14:14:39.13:544,39,0	1/1:0,7:7:18.06:251,18,0	1/1:1,15:16:36.12:502,36,0	1/1:1,5:6:15.01:187,15,0	1/1:0,14:13:30.10:418,30,0	1/1:0,5:5:15.05:210,15,0	1/1:0,10:10:30.10:419,30,0	1/1:0,13:13:33.11:461,33,0	1/1:0,12:12:21.07:293,21,0	1/1:0,9:9:21.07:293,21,0	0/0:17,0:17:48.15:0,48,743	0/0:19,0:19:51.16:0,51,791	1/1:0,11:11:24.08:335,24,0	0/0:25,1:26:36.39:0,36,1154	1/1:0,7:7:18.06:251,18,0	0/0:11,0:11:33.10:0,33,503
chr10	37781210	.	G	GC	8441.03	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=1.205;DP=469;FS=13.543;HRun=8;HaplotypeScore=107.9024;InbreedingCoeff=0.9418;MQ=63.91;MQ0=2;MQRankSum=-5.845;QD=23.00;ReadPosRankSum=0.956;VQSLOD=3.7058;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,120,1097	1/1:3,3:6:12.01:126,12,0	0/0:33,0:32:75.92:0,76,632	0/0:22,0:21:19.60:0,20,253	1/1:6,1:10:8.56:44,9,0	1/1:3,11:14:36.07:400,36,0	1/1:2,16:18:48.14:554,48,0	1/1:13,6:19:30.03:307,30,0	1/1:6,0:13:22.86:122,23,0	1/1:5,7:12:24.07:277,24,0	1/1:3,5:8:15.04:173,15,0	1/1:5,19:24:54.16:623,54,0	1/1:5,17:22:51.14:578,51,0	1/1:0,10:10:30.05:331,30,0	1/1:3,17:21:47.97:533,48,0	1/1:1,0:11:28.41:144,28,0	1/1:6,2:24:39.77:202,40,0	1/1:3,3:6:11.99:115,12,0	1/1:3,6:9:21.05:233,21,0	1/1:2,13:15:39.10:440,39,0	1/1:5,12:17:42.04:442,42,0	1/1:2,10:12:21.06:242,21,0	1/1:7,9:16:30.09:345,30,0	1/1:1,15:16:30.09:346,30,0	1/1:3,6:9:21.05:233,21,0	1/1:3,32:35:90.23:1010,90,0	1/1:1,9:10:24.07:277,24,0	1/1:0,10:10:30.09:346,30,0
chr10	37781296	.	T	TG	1545.40	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-3.597;DP=675;FS=5.845;HRun=4;HaplotypeScore=103.7057;InbreedingCoeff=0.9971;MQ=84.15;MQ0=0;MQRankSum=1.404;QD=35.12;ReadPosRankSum=2.438;VQSLOD=3.4884;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:63,0:62:99:0,168,1824	0/0:7,0:7:21.06:0,21,236	0/0:30,0:30:63.14:0,63,680	0/0:28,0:28:65.35:0,65,761	0/0:24,0:24:63.07:0,63,682	0/0:26,0:26:72:0,72,738	0/0:26,0:26:69.18:0,69,764	0/0:39,0:38:93.69:0,94,1018	0/0:22,0:22:66.19:0,66,746	0/0:20,0:20:60.11:0,60,648	0/0:15,0:15:33.09:0,33,373	0/0:17,0:17:48.12:0,48,533	0/0:20,0:20:42.12:0,42,474	0/0:16,0:16:36.10:0,36,407	0/0:29,0:29:75.05:0,75,803	0/0:26,0:26:75.18:0,75,827	0/0:30,0:30:69.19:0,69,781	0/0:15,0:15:42.08:0,42,462	0/0:19,0:19:51.14:0,51,570	0/0:21,0:21:57.15:0,57,635	0/0:34,0:34:87.17:0,87,951	0/0:20,0:20:54.05:0,54,580	0/0:16,0:16:48.12:0,48,533	0/0:33,0:33:88.43:0,88,970	0/0:11,0:11:27.04:0,27,292	1/1:2,29:31:87.28:1175,87,0	0/0:24,0:23:57.12:0,57,627	1/1:0,13:13:36.12:492,36,0
chr10	37781447	.	A	AT	5632.50	PASS	AB=1.000;AC=54;AF=0.964;AN=56;BaseQRankSum=-1.408;DP=528;FS=2.015;HRun=10;HaplotypeScore=102.6535;InbreedingCoeff=0.0678;MQ=65.60;MQ0=2;MQRankSum=1.182;QD=10.67;ReadPosRankSum=3.177;VQSLOD=4.2927;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:52,0:53:99:494,116,0	1/1:6,0:6:13.39:56,13,0	0/1:7,0:6:18.61:26,0,19	0/1:9,0:9:9.04:9,0,18	1/1:19,0:19:45.80:198,46,0	1/1:23,0:23:56.25:233,56,0	1/1:20,0:20:37.50:156,37,0	1/1:31,0:31:47.75:195,48,0	1/1:20,0:20:40.18:167,40,0	1/1:12,0:12:24.02:102,24,0	1/1:14,0:13:29.46:123,29,0	1/1:3,6:9:18.05:192,18,0	1/1:14,0:14:32.14:134,32,0	1/1:9,0:9:24.17:100,24,0	1/1:20,0:20:48.21:200,48,0	1/1:22,0:21:42.85:177,43,0	1/1:30,0:29:62.07:257,62,0	1/1:27,0:27:60.90:252,61,0	1/1:25,0:25:50.25:209,50,0	1/1:17,0:17:34.88:146,35,0	1/1:15,0:15:32.14:134,32,0	1/1:17,0:16:37.21:157,37,0	1/1:1,11:13:29.90:302,30,0	1/1:3,21:24:57.14:608,57,0	1/1:14,0:14:29.46:123,29,0	1/1:4,13:18:41.55:382,42,0	1/1:17,0:17:40.18:167,40,0	1/1:4,18:23:32.95:334,33,0
chr10	37781448	.	T	TTA	18714.48	PASS	AB=0.947;AC=43;AF=0.768;AN=56;BaseQRankSum=-11.156;DP=549;FS=5.072;HRun=0;HaplotypeScore=70.8947;InbreedingCoeff=0.8741;MQ=64.22;MQ0=2;MQRankSum=-2.399;QD=40.16;ReadPosRankSum=1.934;VQSLOD=6.8388;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,50:52:99:2375,141,0	1/1:0,6:6:15.05:259,15,0	0/0:7,0:6:14.49:0,14,132	0/0:8,0:8:14.83:0,15,121	1/1:1,18:20:57.19:945,57,0	1/1:1,22:23:63.21:1089,63,0	1/1:4,18:22:48.14:777,48,0	1/1:5,27:32:87.10:1222,87,0	1/1:2,19:21:48.15:804,48,0	1/1:4,11:15:39.07:593,39,0	1/1:1,14:14:33.11:569,33,0	0/0:8,0:8:21.58:0,22,113	1/1:1,14:15:39.13:674,39,0	1/1:2,9:11:27.09:466,27,0	1/1:3,19:22:57.17:958,57,0	1/1:1,22:22:51.17:882,51,0	1/1:2,28:29:53.89:1174,54,0	1/1:0,27:27:69.24:1181,69,0	1/1:5,23:28:75.18:1148,75,0	1/1:0,17:17:45.02:708,45,0	1/1:0,15:15:36.12:621,36,0	1/1:2,15:17:45.15:735,45,0	0/0:13,0:13:8.37:0,8,69	0/0:24,0:24:52.03:0,52,210	1/1:1,14:15:33.11:569,33,0	0/1:17,1:18:34.97:35,0,134	1/1:4,16:20:54.18:931,54,0	0/0:23,0:23:19.69:0,20,151
chr10	37781969	.	ATGT	A	751.05	PASS	AB=0.966;AC=20;AF=0.370;AN=54;BaseQRankSum=2.185;DP=552;FS=7.698;HRun=0;HaplotypeScore=107.6318;InbreedingCoeff=0.2106;MQ=65.29;MQ0=5;MQRankSum=-3.289;QD=2.55;ReadPosRankSum=-1.206;VQSLOD=0.6964;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:34:15.73:0,16,113	0/0:8,0:8:0.47:0,0,1	./.	0/1:23,0:17:0:0,0,0	1/1:16,0:15:4.60:28,5,0	0/0:16,0:15:3.94:0,4,26	0/1:23,0:23:11.96:12,0,31	0/0:15,0:13:2.54:0,3,27	1/1:30,2:33:27.02:258,27,0	0/0:15,0:15:5.88:0,6,14	1/1:5,0:5:1.55:4,2,0	0/0:19,0:19:20.99:0,21,348	0/1:27,0:25:6.58:31,0,7	0/1:31,0:29:7.87:8,0,69	0/0:22,0:22:14.77:0,15,105	0/1:29,5:34:17.16:173,0,17	0/1:20,4:24:2.09:71,0,2	0/0:18,0:18:2.25:0,2,113	0/0:11,0:11:5.97:0,6,60	0/0:6,0:6:3:0,3,25	0/1:17,0:17:11.15:11,0,36	1/1:1,0:1:2.98:22,3,0	0/0:13,0:13:2.30:0,2,5	0/0:35,0:36:45.99:0,46,693	0/0:12,0:12:0.47:0,0,1	1/1:24,1:25:7.32:193,7,0	0/1:20,0:18:7.43:7,0,293	1/1:9,6:15:6.02:78,6,0
chr10	37782005	.	TTGTTGTTGTTGCTGTTGC	T	2036.01	PASS	AB=0.972;AC=28;AF=0.538;AN=52;BaseQRankSum=-9.425;DP=472;FS=1.248;HRun=0;HaplotypeScore=190.1018;InbreedingCoeff=-0.0726;MQ=48.95;MQ0=11;MQRankSum=1.521;QD=6.57;ReadPosRankSum=-7.485;VQSLOD=0.3161;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:26:28.83:29,0,579	0/1:4,0:4:31.87:95,0,32	0/0:5,0:2:1.82:0,2,5	./.	0/0:18,0:17:14.06:0,14,232	1/1:14,0:12:5.85:95,6,0	1/1:23,0:22:25.94:433,26,0	1/1:21,0:18:22.93:320,23,0	0/0:32,0:31:24.46:0,24,605	0/1:7,7:11:50.60:131,0,51	1/1:1,0:1:3.01:53,3,0	0/1:20,0:19:99:119,0,877	0/1:26,0:24:99:213,0,140	0/1:28,0:25:56.10:56,0,245	0/1:23,0:22:41.91:42,0,252	0/0:32,0:32:36.12:0,36,879	0/0:30,0:30:23.85:0,24,264	0/1:17,0:17:99:129,0,308	0/1:8,0:7:45.93:46,0,109	./.	1/1:14,0:13:13.29:114,13,0	1/1:2,0:1:3.01:47,3,0	1/1:11,0:11:14.98:127,15,0	0/0:37,0:37:2.10:0,2,2387	1/1:8,0:7:6.41:41,6,0	0/1:17,0:17:14.60:15,0,190	0/1:24,0:21:63.50:63,0,534	0/1:9,0:9:33.84:34,0,119
chr10	37782008	.	TTGTTGTTGC	T	1674.80	PASS	AB=0.996;AC=23;AF=0.426;AN=54;BaseQRankSum=-1.121;DP=460;FS=22.990;HRun=0;HaplotypeScore=132.0499;InbreedingCoeff=0.0594;MQ=48.17;MQ0=12;MQRankSum=-3.515;QD=5.11;ReadPosRankSum=0.559;VQSLOD=1.0003;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:23:74.54:75,0,162	0/1:4,0:4:8.35:8,0,13	0/1:6,0:2:0:0,0,0	./.	1/1:18,0:17:1.72:55,2,0	0/0:14,0:11:6.21:0,6,37	0/1:24,0:23:55.09:55,0,62	0/1:20,0:17:25.38:74,0,25	0/1:31,0:30:8.63:338,0,9	0/1:13,0:10:4.11:4,0,42	0/0:1,0:1:2.98:0,3,21	0/0:20,0:19:16.18:0,16,565	0/1:25,0:23:52.60:58,0,53	0/1:27,0:24:99:106,0,128	0/0:23,0:22:17.76:0,18,197	1/1:31,0:31:30.66:282,31,0	1/1:30,0:30:19.47:276,19,0	0/1:17,0:17:55.69:56,0,165	0/0:8,0:7:7.98:0,8,59	0/0:3,0:3:3:0,3,25	0/0:14,0:13:8.66:0,9,51	0/0:2,0:1:1.25:0,1,3	1/1:11,0:11:0.04:9,0,0	0/0:36,0:36:50.29:0,50,1372	0/0:7,0:6:0.47:0,0,1	1/1:10,6:16:26.44:271,26,0	0/1:23,1:21:65.60:66,0,276	1/1:8,0:8:9:101,9,0
chr10	37782011	.	TTGTTGCTGTTGC	T	2438.06	PASS	AB=0.975;AC=30;AF=0.577;AN=52;BaseQRankSum=-8.991;DP=438;FS=4.364;HRun=0;HaplotypeScore=138.3830;InbreedingCoeff=-0.2491;MQ=47.68;MQ0=11;MQRankSum=-0.179;QD=7.09;ReadPosRankSum=-6.740;VQSLOD=0.0768;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:21,0:21:99:260,0,161	0/1:4,0:4:31.87:45,0,32	0/0:5,0:1:0:0,0,0	./.	0/0:16,0:15:10.94:0,11,118	1/1:13,0:10:5.97:46,6,0	1/1:24,0:23:28.71:268,29,0	1/1:20,0:17:22.91:319,23,0	0/1:30,0:29:99:147,0,237	0/1:11,0:9:9.64:87,0,10	1/1:1,0:1:1.55:4,2,0	0/1:20,0:19:99:119,0,637	0/1:23,0:21:99:156,0,110	0/1:12,14:23:99:211,0,128	0/1:23,0:22:41.91:42,0,154	0/0:30,0:30:30.33:0,30,295	0/1:28,0:28:71.64:72,0,73	0/1:16,0:16:99:147,0,243	0/1:8,0:7:41.92:47,0,42	./.	1/1:13,0:12:14.36:93,14,0	1/1:2,0:1:2.98:22,3,0	1/1:10,0:10:14.98:127,15,0	0/0:35,0:35:0.68:0,1,1414	1/1:7,0:6:6.82:42,7,0	0/1:12,0:12:24.54:81,0,25	0/1:24,0:21:99:224,0,303	0/1:8,0:8:12.37:35,0,12
chr10	37782014	.	TTGC	T	1809.20	PASS	AB=0.905;AC=38;AF=0.731;AN=52;BaseQRankSum=-3.998;DP=421;FS=0.000;HRun=0;HaplotypeScore=104.5974;InbreedingCoeff=-0.1402;MQ=47.33;MQ0=12;MQRankSum=-0.021;QD=4.77;ReadPosRankSum=-2.841;VQSLOD=1.4502;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:20:19.12:205,19,0	0/1:1,2:3:12.99:20,0,13	0/1:4,0:1:0:0,0,0	./.	0/1:15,0:14:3.35:3,0,54	1/1:5,6:9:5.83:46,6,0	1/1:24,0:23:33.18:268,33,0	1/1:7,0:17:35.48:240,35,0	1/1:29,0:29:28.69:163,29,0	1/1:11,0:9:15.35:98,15,0	1/1:1,0:1:3:28,3,0	0/1:21,0:20:51.97:52,0,146	0/1:9,14:21:38.90:78,0,39	0/1:24,1:22:36.04:69,0,36	0/1:12,8:19:40.82:42,0,41	0/1:28,0:28:54.03:54,0,107	0/1:27,0:27:35.12:35,0,85	0/1:15,0:15:4.30:4,0,132	0/1:6,0:6:17.20:17,0,27	./.	1/1:14,0:12:13.29:114,13,0	1/1:2,0:1:3.01:47,3,0	1/1:10,0:10:14.81:110,15,0	0/0:37,0:37:1.21:0,1,274	1/1:4,3:5:6.41:41,6,0	1/1:10,0:10:19.98:122,20,0	0/1:23,1:21:27.20:27,0,133	1/1:8,0:8:11.67:71,12,0
chr10	37782017	.	CTGT	C	843.23	PASS	AB=0.987;AC=30;AF=0.556;AN=54;BaseQRankSum=3.192;DP=419;FS=7.493;HRun=0;HaplotypeScore=107.2360;InbreedingCoeff=0.1076;MQ=46.58;MQ0=12;MQRankSum=-3.811;QD=2.58;ReadPosRankSum=0.635;VQSLOD=1.5259;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:19:15.14:0,15,123	0/1:3,0:3:0:0,0,0	0/1:4,0:1:0:0,0,0	0/0:7,0:1:2.60:0,3,10	1/1:6,7:13:8.83:56,9,0	0/1:10,0:8:0.21:0,0,0	1/1:27,0:26:2.67:21,3,0	0/1:19,0:16:18.39:39,0,18	1/1:22,6:28:29.69:286,30,0	1/1:10,0:9:0.77:9,1,0	1/1:1,0:1:0.47:1,0,0	0/1:21,0:20:48.93:49,0,319	1/1:23,0:21:9.82:47,10,0	0/1:26,0:23:6.12:36,0,6	0/0:19,0:18:2.97:0,3,20	1/1:24,5:29:0.61:177,1,0	0/1:23,4:27:3.38:87,0,3	0/1:14,0:14:21.56:22,0,90	0/0:7,0:6:5.26:0,5,58	./.	1/1:12,0:10:2.92:21,3,0	1/1:3,0:1:2.98:22,3,0	1/1:9,0:9:2.98:31,3,0	0/1:37,0:37:35.45:35,0,564	0/0:7,0:5:0:0,0,0	0/1:11,0:11:25.64:39,0,26	0/0:24,0:21:17.96:0,18,277	0/0:8,0:8:0:0,0,0
chr10	37782020	.	TTGC	T	1859.58	PASS	AB=0.878;AC=26;AF=0.464;AN=56;BaseQRankSum=-4.273;DP=418;FS=7.425;HRun=0;HaplotypeScore=100.3780;InbreedingCoeff=0.3653;MQ=46.16;MQ0=10;MQRankSum=-3.342;QD=6.62;ReadPosRankSum=-0.293;VQSLOD=1.9422;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:18:13.63:163,14,0	0/0:3,0:3:5.95:0,6,44	0/0:6,0:2:2.91:0,3,39	0/0:10,0:2:6:0,6,61	1/1:9,0:10:8.91:66,9,0	0/0:10,0:8:3:0,3,25	0/1:26,0:25:43.33:43,0,76	1/1:17,0:16:17.64:177,18,0	1/1:6,21:27:26.96:350,27,0	0/1:8,0:8:6.48:6,0,35	0/0:2,0:2:2.99:0,3,24	0/1:8,11:18:99:124,0,194	0/0:23,0:21:10.67:0,11,61	0/1:27,0:24:27.15:71,0,27	0/0:21,0:20:8.94:0,9,80	1/1:6,23:29:35.89:388,36,0	1/1:7,19:26:14.91:135,15,0	0/0:14,0:14:3.32:0,3,139	0/0:9,0:8:5.38:0,5,41	1/1:1,0:1:2.80:13,3,0	0/0:12,0:10:0.95:0,1,3	0/0:3,0:1:0.89:0,1,2	1/1:1,4:5:3.01:48,3,0	0/1:16,22:38:99:135,0,327	0/1:8,0:6:0:0,0,0	1/1:10,1:11:17.98:177,18,0	0/0:24,0:21:22.56:0,23,172	1/1:10,0:10:17.89:136,18,0
chr10	37783456	.	TA	T	10364.50	PASS	AB=0.903;AC=43;AF=0.768;AN=56;BaseQRankSum=7.960;DP=672;FS=0.845;HRun=10;HaplotypeScore=88.4007;InbreedingCoeff=0.8228;MQ=67.40;MQ0=3;MQRankSum=1.086;QD=18.54;ReadPosRankSum=3.343;VQSLOD=5.4288;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,52:58:99:1222,141,0	1/1:2,5:7:14.99:130,15,0	0/0:18,1:18:23.99:0,24,227	0/0:21,1:20:1.57:0,2,215	1/1:7,21:28:50:420,50,0	1/1:2,12:14:29.99:260,30,0	1/1:5,28:33:77.97:677,78,0	1/1:14,15:27:41.87:353,42,0	1/1:4,25:29:74.98:649,75,0	1/1:2,34:35:95.83:805,96,0	1/1:1,17:18:44.98:389,45,0	0/0:19,0:19:45.12:0,45,498	1/1:3,18:21:50.99:443,51,0	1/1:3,13:16:29.68:260,30,0	1/1:4,19:23:47.98:417,48,0	1/1:3,15:18:38.98:339,39,0	1/1:2,30:32:86.98:755,87,0	1/1:2,15:17:35.99:312,36,0	1/1:5,13:18:35.97:312,36,0	1/1:8,32:40:94.99:812,95,0	1/1:4,18:22:33.51:445,34,0	1/1:5,22:26:53.98:468,54,0	0/0:20,0:20:48.13:0,48,531	0/0:16,1:17:22.10:0,22,472	1/1:3,10:13:1.52:183,2,0	0/1:25,3:28:10.16:10,0,568	1/1:1,29:30:80.94:703,81,0	0/0:16,0:16:45.09:0,45,480
chr10	37783753	.	CAAAAA	C	15483.57	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-9.447;DP=520;FS=4.273;HRun=13;HaplotypeScore=119.4657;InbreedingCoeff=0.9727;MQ=63.99;MQ0=2;MQRankSum=-3.075;QD=35.19;ReadPosRankSum=3.403;VQSLOD=3.8018;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,23:25:57.07:937,57,0	1/1:0,3:3:9.03:152,9,0	0/0:17,0:10:20.99:0,21,319	0/0:13,0:11:14.88:0,15,244	1/1:1,18:19:47.82:745,48,0	1/1:1,18:19:45.11:771,45,0	1/1:2,7:9:15.04:255,15,0	1/1:3,17:20:48.08:784,48,0	1/1:3,14:17:33.04:563,33,0	1/1:1,27:29:84.24:1345,84,0	1/1:3,22:25:51.03:836,51,0	0/0:0,0:14:37.50:0,37,156	1/1:2,13:15:30.09:514,30,0	1/1:1,18:20:51.15:849,51,0	1/1:4,24:28:54.11:920,54,0	1/1:7,13:21:47.51:717,48,0	1/1:5,12:17:26.94:399,27,0	1/1:1,6:7:21.03:328,21,0	1/1:3,5:7:18.01:276,18,0	1/1:4,29:33:69.14:1177,69,0	1/1:3,12:15:21.44:407,21,0	1/1:1,26:28:75.22:1259,75,0	0/0:3,0:18:32.25:0,32,140	0/0:2,0:16:37.79:0,38,164	1/1:2,24:27:56.60:930,57,0	1/1:4,0:17:32.41:120,32,0	1/1:4,25:29:66.17:1126,66,0	1/1:1,0:9:19.96:74,20,0
chr10	37783822	.	C	CTGTTT	25866.03	PASS	AB=0.712;AC=50;AF=0.893;AN=56;BaseQRankSum=-4.655;DP=660;FS=4.152;HRun=0;HaplotypeScore=148.5151;InbreedingCoeff=0.5924;MQ=62.07;MQ0=1;MQRankSum=-0.820;QD=42.26;ReadPosRankSum=4.062;VQSLOD=4.4679;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:31:27.09:591,27,0	1/1:2,5:8:17.72:487,18,0	0/0:15,0:9:8.69:0,9,124	0/0:32,0:22:23.30:0,23,294	1/1:16,17:32:48.53:1041,49,0	1/1:12,10:22:39.13:1103,39,0	1/1:13,4:17:24.08:576,24,0	1/1:36,0:36:15.04:229,15,0	1/1:5,10:15:30.10:853,30,0	1/1:20,6:26:24.08:632,24,0	1/1:10,12:22:39.12:949,39,0	0/1:13,10:23:13.17:902,0,13	1/1:9,8:17:33.11:855,33,0	1/1:14,14:28:54.18:1465,54,0	1/1:11,10:21:36.11:964,36,0	1/1:6,20:26:63.22:1774,63,0	1/1:6,22:28:66.23:1876,66,0	1/1:8,9:18:30.57:807,31,0	1/1:13,5:18:18.06:512,18,0	1/1:16,15:31:51.17:1349,51,0	0/1:10,6:16:31.21:520,0,31	1/1:18,13:31:49.05:1211,49,0	1/1:10,14:24:48.12:1130,48,0	1/1:7,9:16:28.91:774,29,0	1/1:17,9:25:36.10:875,36,0	1/1:7,16:23:51.17:1423,51,0	1/1:12,13:24:48.16:1363,48,0	1/1:11,17:31:57.20:1606,57,0
chr10	37784366	.	G	GAA	3804.86	PASS	AB=0.986;AC=23;AF=0.411;AN=56;BaseQRankSum=6.058;DP=714;FS=4.457;HRun=1;HaplotypeScore=203.7749;InbreedingCoeff=0.2325;MQ=50.37;MQ0=33;MQRankSum=-3.047;QD=11.26;ReadPosRankSum=-2.854;VQSLOD=-0.6827;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:39:0.94:0,1,305	1/1:7,1:8:2.80:101,3,0	0/0:64,0:18:9.61:0,10,127	0/0:76,0:27:31.98:0,32,246	0/0:12,0:12:8.73:0,9,60	1/1:18,0:18:6.52:213,7,0	0/1:23,1:21:6.10:272,0,6	1/1:29,0:28:13.11:476,13,0	0/0:24,0:24:40.34:0,40,303	0/1:26,0:26:85.84:291,0,86	0/1:9,0:9:21.69:38,0,22	0/0:17,0:16:32.91:0,33,269	0/1:24,0:23:31.61:332,0,32	1/1:22,0:21:40.56:298,41,0	1/1:22,2:23:51.03:400,51,0	0/0:14,0:11:8.85:0,9,75	0/0:16,0:14:32.87:0,33,228	0/1:22,1:23:34.63:334,0,35	0/1:17,0:14:53.48:120,0,53	0/1:22,0:21:13.76:101,0,14	1/1:30,0:27:4.43:233,4,0	0/1:22,0:21:65.82:148,0,66	0/0:22,0:22:41.93:0,42,342	0/0:53,0:50:91.68:0,92,715	0/1:16,0:16:60.21:128,0,60	0/0:23,0:23:68.87:0,69,591	1/1:21,2:22:12.94:320,13,0	0/0:13,0:11:32.81:0,33,251
chr10	37784371	.	A	AC	905.79	PASS	AB=0.698;AC=6;AF=0.107;AN=56;BaseQRankSum=3.501;DP=732;FS=26.036;HRun=0;HaplotypeScore=210.3664;InbreedingCoeff=0.6927;MQ=50.81;MQ0=31;MQRankSum=-0.521;QD=13.94;ReadPosRankSum=0.914;VQSLOD=2.7957;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:54.05:0,54,661	0/0:10,0:10:18.06:0,18,241	0/0:69,0:20:39.98:0,40,373	0/0:87,0:34:35.90:0,36,495	1/1:3,8:12:9.03:121,9,0	0/0:21,0:21:33.34:0,33,396	0/0:24,0:21:36.49:0,36,413	0/0:32,0:31:87.22:0,87,1130	1/1:4,19:23:22.46:531,22,0	0/0:29,0:29:79.79:0,80,1040	0/0:9,0:9:14.84:0,15,155	0/0:15,1:15:38.86:0,39,504	0/0:25,0:24:54.62:0,55,723	0/0:20,0:20:28.53:0,29,336	0/0:25,0:24:39.62:0,40,401	0/1:8,6:11:0.75:112,0,1	0/1:9,7:14:28.53:273,0,29	0/0:22,0:22:59.28:0,59,691	0/0:17,0:14:39.12:0,39,510	0/0:23,0:21:25.53:0,26,314	0/0:30,0:27:14.77:0,15,408	0/0:21,0:20:23.91:0,24,284	0/0:17,0:17:45.15:0,45,621	0/0:55,0:52:83.07:0,83,1125	0/0:17,0:17:30.98:0,31,371	0/0:23,0:23:66.20:0,66,881	0/0:24,0:23:42.18:0,42,537	0/0:13,0:11:31.65:0,32,415
chr10	37784410	.	GAC	G	4211.27	PASS	AB=1.000;AC=43;AF=0.768;AN=56;BaseQRankSum=12.576;DP=718;FS=0.863;HRun=0;HaplotypeScore=239.7902;InbreedingCoeff=0.8081;MQ=48.92;MQ0=22;MQRankSum=-6.316;QD=8.76;ReadPosRankSum=-0.059;VQSLOD=4.1322;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:42,0:42:50.20:344,50,0	1/1:12,0:12:26.73:183,27,0	0/1:46,0:15:6.71:7,0,148	0/0:98,0:38:23.89:0,24,482	1/1:15,1:16:14.68:104,15,0	1/1:24,0:24:23.47:171,23,0	1/1:20,0:20:8.63:62,9,0	1/1:29,0:28:60.40:441,60,0	1/1:20,4:24:44.47:326,44,0	1/1:30,1:31:80.41:581,80,0	1/1:12,0:12:2.92:25,3,0	0/0:20,0:20:60.16:0,60,937	1/1:21,0:21:44.55:317,45,0	1/1:14,0:14:17.57:120,18,0	1/1:25,0:25:5.80:41,6,0	1/1:28,0:28:41.40:297,41,0	1/1:12,1:12:20.74:141,21,0	1/1:8,0:11:24.49:156,24,0	1/1:13,0:11:29.69:200,30,0	1/1:17,0:18:8.98:79,9,0	1/1:19,0:19:16.79:98,17,0	1/1:21,0:21:5.04:50,5,0	0/0:21,0:21:60.18:0,60,976	0/0:57,0:58:69.21:0,69,1214	1/1:11,0:12:8.81:60,9,0	0/0:28,0:28:60.16:0,60,965	1/1:29,0:28:59.06:408,59,0	0/0:10,0:10:30.03:0,30,466
chr10	37784414	.	CACAG	C	10419.72	PASS	AB=0.770;AC=42;AF=0.750;AN=56;BaseQRankSum=8.354;DP=692;FS=0.834;HRun=0;HaplotypeScore=225.8872;InbreedingCoeff=0.7636;MQ=48.15;MQ0=21;MQRankSum=-4.207;QD=22.70;ReadPosRankSum=1.436;VQSLOD=4.6998;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,36:41:50.20:962,50,0	1/1:1,10:11:19.56:519,20,0	0/1:38,0:11:3.60:4,0,265	0/0:90,0:36:48.63:0,49,997	1/1:6,12:17:13.73:257,14,0	1/1:3,20:23:23.49:404,23,0	1/1:2,16:18:8.89:179,9,0	1/1:9,16:24:66.05:1011,66,0	1/1:9,15:25:47.89:769,48,0	1/1:4,27:31:84.22:1556,84,0	1/1:1,11:12:2.98:25,3,0	0/0:21,0:21:60.19:0,60,1528	1/1:4,17:21:45.10:745,45,0	1/1:1,12:14:17.40:314,17,0	1/1:0,25:25:5.84:119,6,0	1/1:1,25:26:42.08:810,42,0	1/1:4,7:10:20.92:335,21,0	1/1:7,3:10:17.24:308,17,0	1/1:1,11:10:30.10:580,30,0	1/1:5,12:17:8.41:136,8,0	1/1:11,6:17:16.65:170,17,0	0/1:5,17:22:9.57:42,0,10	0/0:20,0:20:60.18:0,60,1532	0/0:61,0:60:56.74:0,57,1940	1/1:5,7:12:9.02:127,9,0	0/0:27,1:28:21.64:0,22,1780	1/1:2,27:29:60.01:1048,60,0	0/0:12,0:12:36.12:0,36,878
chr10	37784452	.	G	GACAGAC	7125.28	PASS	AB=0.810;AC=27;AF=0.482;AN=56;BaseQRankSum=-3.484;DP=766;FS=1.327;HRun=0;HaplotypeScore=345.2987;InbreedingCoeff=0.5677;MQ=48.60;MQ0=16;MQRankSum=-5.848;QD=19.63;ReadPosRankSum=-2.546;VQSLOD=3.3755;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:43.27:0,43,658	1/1:7,9:16:0.05:253,0,0	0/0:26,0:6:3.99:0,4,53	0/0:63,0:31:30.01:0,30,475	0/0:28,0:27:29.20:0,29,548	1/1:15,13:28:5.64:342,6,0	0/1:20,2:22:6.96:55,0,7	1/1:36,0:33:68.69:740,69,0	0/0:26,0:26:52.46:0,52,1006	1/1:24,6:30:59.89:1573,60,0	1/1:18,4:21:3.49:28,3,0	0/0:24,0:23:50.58:0,51,955	1/1:13,15:28:25.43:769,25,0	1/1:11,9:20:11.37:192,11,0	1/1:15,11:26:2.39:48,2,0	0/0:30,0:30:51.95:0,52,940	0/0:8,0:7:14.98:0,15,281	1/1:9,3:12:5.11:318,5,0	1/1:7,22:28:54.87:1299,55,0	0/1:16,13:29:0.44:116,0,0	0/1:11,3:13:20.28:59,0,20	0/0:14,14:28:1.58:0,2,7	0/0:30,0:30:37.51:0,38,578	0/0:47,0:46:0.05:0,0,497	1/1:6,7:13:2.78:14,3,0	0/0:36,1:37:0.17:0,0,1848	1/1:14,22:36:45.91:1320,46,0	0/0:11,0:11:27.09:0,27,607
chr10	37784472	.	G	GGA	5456.38	PASS	AB=0.848;AC=26;AF=0.464;AN=56;BaseQRankSum=9.319;DP=878;FS=7.449;HRun=0;HaplotypeScore=411.8986;InbreedingCoeff=-0.7283;MQ=54.59;MQ0=14;MQRankSum=-10.204;QD=7.44;ReadPosRankSum=-8.012;VQSLOD=2.5043;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:36,9:45:99:219,0,211	0/1:12,1:13:47.58:52,0,48	0/0:45,0:22:12.07:0,12,379	0/0:89,0:45:62.69:0,63,631	0/1:27,7:34:99:186,0,345	0/1:27,3:30:52.91:280,0,53	0/1:19,4:23:99:153,0,177	0/1:36,2:36:99:107,0,788	0/1:23,6:29:99:312,0,536	0/1:30,9:38:99:409,0,727	0/1:20,6:26:54.89:207,0,55	0/1:20,7:26:99:279,0,428	0/1:22,7:30:99:286,0,208	0/1:15,4:20:51.78:218,0,52	0/1:29,7:35:31.64:433,0,32	0/1:27,5:32:99:177,0,487	0/0:8,1:8:10.72:0,11,135	0/1:12,4:16:99:214,0,168	0/1:17,1:16:65.94:66,0,280	0/1:26,8:34:13.48:374,0,13	0/1:15,0:14:44.93:45,0,68	1/1:22,8:30:29.23:266,29,0	0/1:18,18:37:99:537,0,184	0/1:34,2:37:77.90:78,0,226	0/1:12,3:15:46.06:90,0,46	0/1:41,6:47:99:290,0,1265	0/1:42,3:43:81.84:82,0,467	0/1:10,6:16:97.87:98,0,355
chr10	37784489	.	TAGAG	T	3156.85	PASS	AB=0.680;AC=5;AF=0.089;AN=56;BaseQRankSum=-2.890;DP=919;FS=4.036;HRun=0;HaplotypeScore=444.0415;InbreedingCoeff=-0.0990;MQ=58.31;MQ0=5;MQRankSum=-1.942;QD=19.13;ReadPosRankSum=1.745;VQSLOD=2.8123;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:47.39:0,47,649	0/0:11,0:11:18.05:0,18,363	0/0:43,0:28:59.02:0,59,1158	0/0:93,0:56:45.62:0,46,1171	0/0:33,0:33:72.13:0,72,1470	0/0:29,0:29:51.04:0,51,1044	0/0:25,0:25:50.65:0,51,1064	0/0:52,0:52:99:0,120,2578	0/0:29,0:29:81.18:0,81,1683	0/0:43,0:42:99:0,122,2609	0/0:30,0:30:53.33:0,53,912	0/1:17,9:25:99:535,0,341	0/0:30,0:30:63.09:0,63,1274	0/0:22,0:22:51.11:0,51,942	0/0:41,0:40:78.19:0,78,1643	0/0:29,0:29:66.20:0,66,1348	0/0:12,0:11:15.85:0,16,239	0/0:16,0:16:41.88:0,42,754	0/0:20,0:18:51.11:0,51,989	0/0:45,0:45:84.06:0,84,1492	0/0:18,0:17:29.80:0,30,534	0/0:32,0:32:60.10:0,60,1071	0/1:26,13:39:99:560,0,666	0/1:11,19:30:98.43:195,0,98	0/0:15,0:15:30.02:0,30,623	0/1:21,31:52:99:1491,0,455	0/0:40,0:39:84.16:0,84,1743	0/1:9,9:18:99:493,0,149
chr10	37784686	.	CAG	C	1436.80	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-1.153;DP=865;FS=2.780;HRun=0;HaplotypeScore=191.0012;InbreedingCoeff=0.9023;MQ=51.94;MQ0=39;MQRankSum=1.997;QD=19.96;ReadPosRankSum=-1.242;VQSLOD=3.7812;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:87.25:0,87,1405	0/0:14,0:14:36.12:0,36,547	0/0:83,0:23:3.49:0,3,438	0/0:126,1:21:29:0,29,301	1/1:11,10:20:36.59:472,37,0	0/0:22,0:22:47.95:0,48,789	0/0:25,0:25:41.97:0,42,670	0/0:41,0:41:84.14:0,84,1159	1/1:5,9:13:33.06:408,33,0	0/0:33,0:33:72.20:0,72,1118	0/0:17,0:16:26.66:0,27,408	0/0:23,0:22:57.15:0,57,908	0/0:17,0:17:36.12:0,36,583	0/0:19,0:19:42.14:0,42,684	0/0:36,0:36:78.26:0,78,1239	1/1:14,5:19:2.78:379,3,0	1/1:11,7:17:26.98:328,27,0	0/0:24,1:25:53.67:0,54,862	0/0:21,0:18:45.13:0,45,704	0/0:29,0:29:51.01:0,51,711	0/0:39,0:39:47.95:0,48,768	0/0:21,0:21:26.86:0,27,398	0/0:23,0:23:54.18:0,54,916	0/0:43,0:43:80.47:0,80,1339	0/0:18,0:18:23.53:0,24,381	0/0:37,0:37:99:0,102,1677	0/0:18,0:18:33.11:0,33,510	0/0:18,0:18:50.75:0,51,762
chr10	37784703	.	CAGAA	C	12536.75	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=1.527;DP=802;FS=5.718;HRun=0;HaplotypeScore=184.0386;InbreedingCoeff=0.9830;MQ=62.54;MQ0=23;MQRankSum=-1.713;QD=34.82;ReadPosRankSum=4.177;VQSLOD=4.3779;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:39:95.88:0,96,2052	1/1:1,13:14:33.11:624,33,0	0/0:75,0:38:5.73:0,6,1301	0/0:117,0:30:33.08:0,33,777	0/0:20,0:19:39.09:0,39,977	1/1:1,19:20:48.63:889,49,0	1/1:2,20:22:32.59:677,33,0	1/1:4,40:44:99:1538,99,0	0/0:18,0:17:47.80:0,48,905	1/1:1,28:28:72.21:1298,72,0	1/1:1,14:15:21.81:360,22,0	0/0:21,0:20:51.10:0,51,1171	1/1:5,9:14:32.99:548,33,0	1/1:0,20:20:51.17:914,51,0	1/1:1,29:30:78.27:1459,78,0	0/0:22,0:22:57.09:0,57,1275	0/0:17,0:17:42.10:0,42,1043	1/1:5,18:23:45.15:853,45,0	1/1:6,14:18:41.86:557,42,0	1/1:0,23:23:28.67:566,29,0	1/1:1,32:33:42.48:771,42,0	1/1:0,16:16:20.51:396,21,0	0/0:24,0:24:66.09:0,66,1533	0/0:37,0:38:60.59:0,61,1808	1/1:1,17:18:26.31:504,26,0	0/0:32,0:32:90.30:0,90,2317	1/1:3,16:19:33.04:584,33,0	0/0:16,0:16:45.15:0,45,1207
chr10	37784769	.	G	GGA	4509.66	PASS	AB=0.983;AC=39;AF=0.696;AN=56;BaseQRankSum=7.489;DP=734;FS=9.148;HRun=0;HaplotypeScore=195.0255;InbreedingCoeff=0.6401;MQ=69.43;MQ0=32;MQRankSum=-5.307;QD=9.43;ReadPosRankSum=-1.144;VQSLOD=3.1183;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:27:7.48:8,0,7	1/1:7,0:7:6.02:86,6,0	0/1:100,0:32:0.53:1,0,80	0/0:130,0:43:10.96:0,11,147	0/1:17,1:17:1.81:171,0,2	1/1:13,1:13:20.10:203,20,0	1/1:18,0:19:22.98:196,23,0	1/1:36,0:36:37.24:411,37,0	1/1:15,0:16:30.06:408,30,0	1/1:23,0:22:32.97:381,33,0	1/1:8,1:8:6.02:93,6,0	0/0:21,0:21:51.14:0,51,598	1/1:13,0:13:17.85:173,18,0	1/1:16,0:14:19.47:179,19,0	1/1:24,0:25:38.12:323,38,0	1/1:24,1:25:41.77:567,42,0	1/1:18,0:19:20.09:326,20,0	1/1:11,1:12:8.96:115,9,0	1/1:15,0:13:20.88:216,21,0	0/1:7,0:6:6.18:16,0,6	1/1:16,0:16:7.99:116,8,0	1/1:19,0:17:16.87:143,17,0	0/0:27,0:28:41.95:0,42,471	0/0:23,0:23:22.20:0,22,447	0/1:13,0:13:7.05:68,0,7	0/0:23,0:24:59.99:0,60,674	1/1:22,1:23:37.16:312,37,0	0/0:26,0:27:63.02:0,63,732
chr10	37784788	.	G	GAGAAGA	11094.16	PASS	AB=0.855;AC=36;AF=0.643;AN=56;BaseQRankSum=6.829;DP=720;FS=8.821;HRun=0;HaplotypeScore=181.3816;InbreedingCoeff=0.6101;MQ=53.37;MQ0=25;MQRankSum=-3.003;QD=28.89;ReadPosRankSum=-4.476;VQSLOD=3.0253;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:17,0:23:25.53:54,0,26	1/1:5,0:5:12.01:184,12,0	0/0:89,0:24:55.89:0,56,800	0/0:121,0:29:13.80:0,14,402	0/1:22,0:22:0.15:127,0,0	1/1:5,3:13:36.12:802,36,0	0/1:18,3:24:0.23:723,0,0	1/1:33,0:36:68.63:1169,69,0	1/1:19,0:20:19.83:266,20,0	1/1:13,0:20:47.86:1065,48,0	1/1:10,0:10:12.03:217,12,0	0/0:18,0:18:54.17:0,54,1274	1/1:3,9:17:21.96:533,22,0	1/1:13,2:14:35.93:551,36,0	1/1:11,4:21:57.19:1273,57,0	1/1:23,0:23:7.81:299,8,0	0/1:17,0:17:0.50:236,0,1	1/1:10,1:13:23.53:521,24,0	1/1:10,1:12:27.08:545,27,0	0/1:12,0:13:16.92:157,0,17	1/1:8,1:10:17.31:376,17,0	1/1:11,1:18:29.28:458,29,0	0/0:28,0:28:53.79:0,54,1214	0/0:22,0:22:28.23:0,28,1067	0/1:10,1:12:21.81:277,0,22	0/0:25,0:25:72.24:0,72,1657	1/1:11,8:22:54.75:1261,55,0	0/0:30,0:30:81.28:0,81,1826
chr10	37784791	.	GAGAGAGAC	G	1280.98	PASS	AB=0.976;AC=20;AF=0.357;AN=56;BaseQRankSum=3.362;DP=726;FS=6.229;HRun=0;HaplotypeScore=227.5792;InbreedingCoeff=-0.2305;MQ=54.17;MQ0=26;MQRankSum=-0.214;QD=3.87;ReadPosRankSum=-5.835;VQSLOD=0.6127;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:24:61.57:62,0,124	0/1:4,0:4:11.91:20,0,12	0/0:87,0:26:59.79:0,60,1378	0/0:118,0:31:39.15:0,39,593	1/1:6,13:21:7.65:120,8,0	0/1:15,0:14:52.70:53,0,239	0/1:23,0:23:2.31:2,0,286	0/1:39,0:39:23.23:23,0,429	0/1:12,5:19:11.66:223,0,12	0/1:24,0:24:31.16:31,0,494	0/1:11,0:10:0.28:0,0,100	0/0:18,0:18:51.14:0,51,1639	0/0:18,0:18:20.86:0,21,327	0/1:16,0:14:58.22:58,0,116	0/1:22,0:22:13.23:13,0,523	0/1:20,1:23:18.32:426,0,18	1/1:14,2:16:3.14:260,3,0	0/1:14,0:14:14.98:15,0,289	0/1:14,0:12:40.91:41,0,181	0/1:14,0:13:3.79:4,0,145	0/1:10,0:9:31.30:78,0,31	0/0:21,0:18:3.14:0,3,194	0/0:30,0:30:58.07:0,58,1905	0/0:23,0:22:45.81:0,46,1636	0/1:12,0:12:7.96:8,0,75	0/0:26,0:26:72.17:0,72,2475	0/0:23,0:23:24.35:0,24,736	0/0:30,0:30:81.28:0,81,2860
chr10	37785327	.	GTC	G	11525.58	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=10.992;DP=618;FS=0.000;HRun=0;HaplotypeScore=156.8281;InbreedingCoeff=0.9834;MQ=80.83;MQ0=4;MQRankSum=-2.957;QD=27.44;ReadPosRankSum=3.004;VQSLOD=6.0007;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,42:50:93.19:1237,93,0	1/1:1,6:7:18.06:233,18,0	0/0:38,0:25:21.68:0,22,565	0/0:66,0:52:65.68:0,66,960	1/1:4,12:16:24.04:319,24,0	1/1:1,8:9:18.06:240,18,0	1/1:1,23:24:33.11:439,33,0	1/1:3,28:31:78.23:1001,78,0	1/1:2,16:18:39.13:518,39,0	1/1:2,16:19:51.17:677,51,0	1/1:1,5:6:12.04:160,12,0	0/0:29,0:29:78.27:0,78,1341	1/1:3,20:23:42.14:559,42,0	1/1:2,14:16:23.82:319,24,0	1/1:2,22:24:54.18:719,54,0	1/1:0,14:13:30.10:399,30,0	1/1:1,34:35:78.26:1038,78,0	1/1:2,17:19:45.15:599,45,0	1/1:2,26:28:78.26:1031,78,0	1/1:0,12:12:24.08:319,24,0	1/1:3,28:31:54.18:719,54,0	1/1:1,13:14:27.09:359,27,0	0/0:9,0:9:24.08:0,24,416	0/0:27,0:27:69.24:0,69,1189	1/1:1,9:10:12.04:160,12,0	0/0:15,0:15:42.14:0,42,728	1/1:1,13:14:36.12:479,36,0	0/0:13,0:13:39.13:0,39,675
chr10	37785955	.	TGC	T	566.84	PASS	AB=0.983;AC=14;AF=0.250;AN=56;BaseQRankSum=1.769;DP=686;FS=7.148;HRun=0;HaplotypeScore=196.2371;InbreedingCoeff=-0.1249;MQ=48.27;MQ0=9;MQRankSum=-1.940;QD=1.52;ReadPosRankSum=-3.074;VQSLOD=1.1077;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:37,0:36:45.27:45,0,229	0/0:5,0:5:2.64:0,3,12	0/0:24,0:9:27.08:0,27,468	0/0:23,0:11:26.59:0,27,393	0/1:14,1:15:7.43:7,0,110	0/0:13,0:13:18.42:0,18,104	0/1:38,0:37:28.78:29,0,136	1/1:25,0:24:11.18:210,11,0	0/0:25,0:25:54.12:0,54,436	0/1:27,0:26:89.04:101,0,89	0/0:12,0:12:4.39:0,4,16	0/0:33,0:33:93.10:0,93,1545	0/1:19,0:16:14.59:15,0,38	0/1:32,0:31:6.06:6,0,129	0/1:21,0:21:2.80:3,0,66	0/1:20,4:23:31.81:32,0,234	0/0:30,0:30:7.72:0,8,391	0/0:16,0:16:12.15:0,12,98	0/1:21,0:15:4.39:148,0,4	0/1:9,0:8:13.29:13,0,13	0/1:80,0:75:38.16:38,0,251	0/0:10,0:10:6.61:0,7,24	0/0:14,0:14:38.94:0,39,539	0/0:44,0:43:99:0,105,1736	0/1:25,0:25:56.06:70,0,56	0/0:34,0:34:90.04:0,90,1503	0/0:14,0:14:3.42:0,3,163	0/0:15,0:15:45.15:0,45,824
chr10	37785957	.	CGT	C	4050.14	PASS	AB=0.969;AC=32;AF=0.571;AN=56;BaseQRankSum=11.935;DP=690;FS=0.000;HRun=0;HaplotypeScore=188.5015;InbreedingCoeff=0.6653;MQ=48.37;MQ0=10;MQRankSum=-1.312;QD=9.44;ReadPosRankSum=0.344;VQSLOD=3.3865;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:38,0:37:1.32:1,0,38	1/1:5,0:5:0.94:2,1,0	0/0:23,0:9:24.05:0,24,375	0/0:24,0:11:23.55:0,24,327	0/0:16,0:16:5.01:0,5,44	0/1:13,0:13:12.32:49,0,12	1/1:35,3:37:21.02:276,21,0	1/1:17,7:23:61.23:605,61,0	0/0:25,0:25:17.39:0,17,155	1/1:18,7:25:46.85:386,47,0	1/1:9,2:11:5.61:30,6,0	0/0:35,0:35:94.92:0,95,1500	1/1:20,0:17:12.43:116,12,0	1/1:30,2:31:50.09:324,50,0	1/1:21,1:22:27.38:143,27,0	0/1:24,0:23:5.55:6,0,77	0/0:29,0:29:3.50:0,4,141	1/1:16,0:16:38.85:248,39,0	1/1:17,6:16:34.63:413,35,0	1/1:7,2:8:14.47:96,14,0	1/1:70,9:74:99:921,124,0	1/1:11,0:11:8.52:42,9,0	0/0:14,0:14:34.96:0,35,469	0/0:44,0:43:96.30:0,96,1634	1/1:23,2:25:38.23:314,38,0	0/0:35,0:35:79.22:0,79,1551	0/1:12,2:14:27.62:79,0,28	0/0:16,0:16:47.76:0,48,714
chr10	37785959	.	T	TGC	6602.33	PASS	AB=1.000;AC=33;AF=0.589;AN=56;BaseQRankSum=11.824;DP=696;FS=0.359;HRun=0;HaplotypeScore=185.6413;InbreedingCoeff=0.8903;MQ=48.22;MQ0=10;MQRankSum=-0.857;QD=16.51;ReadPosRankSum=2.430;VQSLOD=4.5307;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:35:18.59:0,19,233	1/1:1,4:5:2.64:50,3,0	0/0:23,0:9:24.05:0,24,342	0/0:23,0:10:24.06:0,24,330	0/0:15,0:15:14.89:0,15,118	1/1:3,11:15:18.91:265,19,0	1/1:27,10:36:30.49:325,30,0	1/1:22,1:22:52.59:412,53,0	0/1:24,0:24:2.42:2,0,184	1/1:13,14:27:27.82:498,28,0	1/1:4,7:11:5.63:101,6,0	0/0:35,0:35:99:0,99,1454	1/1:4,16:17:20.71:303,21,0	1/1:19,13:31:25.93:672,26,0	1/1:4,18:23:35.61:552,36,0	0/0:24,0:23:11.57:0,12,193	0/0:32,0:32:27.63:0,28,247	1/1:9,8:17:36.82:460,37,0	1/1:14,10:17:43.64:427,44,0	1/1:6,4:9:14.84:212,15,0	1/1:64,20:79:99:1407,120,0	1/1:1,11:12:8.74:150,9,0	0/0:14,0:14:36.12:0,36,536	0/0:43,0:42:96.20:0,96,1442	1/1:15,9:24:39.62:433,40,0	0/0:34,1:35:50.76:0,51,1408	1/1:7,5:12:23.10:334,23,0	0/0:16,0:16:48.15:0,48,709
chr10	37785961	.	TGC	T	2734.11	PASS	AB=0.942;AC=31;AF=0.554;AN=56;BaseQRankSum=5.571;DP=685;FS=1.772;HRun=0;HaplotypeScore=189.8124;InbreedingCoeff=0.2753;MQ=48.10;MQ0=11;MQRankSum=0.155;QD=5.50;ReadPosRankSum=-7.052;VQSLOD=1.1108;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:35,0:34:39.80:312,40,0	0/0:5,0:5:1.88:0,2,6	0/0:20,0:7:20.97:0,21,193	0/0:24,0:10:16.90:0,17,184	1/1:14,0:14:9.46:77,9,0	0/1:15,0:15:15.05:15,0,17	0/1:31,3:33:14.06:112,0,14	1/1:20,4:23:39.77:380,40,0	0/1:21,0:21:13.20:122,0,13	1/1:25,2:27:11.53:257,12,0	1/1:9,1:10:0.36:1,0,0	0/0:33,0:33:71.29:0,71,1419	0/1:19,1:17:11.07:21,0,11	0/1:32,0:31:31.81:146,0,32	0/1:21,2:23:4.04:87,0,4	1/1:24,1:24:22.59:215,23,0	1/1:32,0:32:22.24:199,22,0	1/1:16,1:17:8.75:141,9,0	1/1:24,0:17:22.93:207,23,0	0/1:8,2:9:5.59:79,0,6	0/1:77,7:79:17.91:341,0,18	1/1:12,0:12:1.81:6,2,0	0/0:13,0:13:2.09:0,2,367	0/0:41,0:40:96.16:0,96,1596	1/1:22,3:25:14.36:165,14,0	0/0:35,0:35:27.58:0,28,1317	0/1:12,1:13:33.10:33,0,86	0/0:16,0:16:35.23:0,35,567
chr10	37785983	.	T	TGTGTGTGTGC	4049.81	PASS	AB=0.973;AC=27;AF=0.482;AN=56;BaseQRankSum=-5.362;DP=654;FS=3.433;HRun=0;HaplotypeScore=256.4291;InbreedingCoeff=-0.3490;MQ=52.60;MQ0=9;MQRankSum=-0.468;QD=7.46;ReadPosRankSum=-4.492;VQSLOD=1.6753;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:29:23.57:57,0,24	0/1:6,0:6:4.41:37,0,4	0/1:10,0:3:11.99:12,0,12	0/1:17,0:7:1.09:1,0,26	1/1:10,0:10:12.23:119,12,0	0/1:15,0:15:19.53:75,0,20	0/1:35,0:35:52.27:209,0,52	0/1:19,0:18:61.30:223,0,61	0/1:5,9:20:9.74:338,0,10	0/1:18,0:18:73.27:139,0,73	0/1:8,0:8:1.77:16,0,2	0/0:34,0:34:96.21:0,96,2384	0/1:19,0:17:58.79:59,0,72	0/1:38,0:37:99:203,0,259	0/1:25,0:25:48.15:48,0,96	1/1:21,0:20:19.26:239,19,0	1/1:9,20:38:27.09:963,27,0	0/1:17,0:17:99:181,0,129	0/1:15,0:13:11.52:128,0,12	0/1:10,0:9:44.54:45,0,121	0/1:85,0:82:99:737,0,486	0/1:13,0:13:2.17:30,0,2	0/0:14,0:14:38.96:0,39,800	0/0:50,0:49:93.53:0,94,2622	0/1:23,0:23:81.60:132,0,82	0/1:30,0:31:1.44:1,0,1790	0/1:15,0:16:57.15:57,0,213	0/0:13,0:13:33.05:0,33,774
chr10	37786136	.	ACCCTC	A	5805.76	PASS	AB=0.620;AC=29;AF=0.518;AN=56;BaseQRankSum=12.701;DP=335;FS=11.462;HRun=0;HaplotypeScore=142.7627;InbreedingCoeff=0.1231;MQ=79.56;MQ0=0;MQRankSum=-13.333;QD=26.03;ReadPosRankSum=6.537;VQSLOD=3.7648;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:6,12:18:99:524,0,133	0/1:2,1:3:31.39:41,0,31	0/0:16,0:17:51.09:0,51,1294	0/0:18,0:18:53.92:0,54,1565	0/1:2,11:13:5.61:351,0,6	0/1:5,9:14:10.42:399,0,10	1/1:4,5:9:20.95:244,21,0	0/1:7,7:14:99:289,0,245	1/1:3,2:5:8.96:109,9,0	0/1:2,11:13:58.62:474,0,59	1/1:1,4:5:9.03:136,9,0	0/0:17,0:17:48.16:0,48,1559	1/1:3,7:10:0.99:234,1,0	0/1:4,11:15:48.73:368,0,49	1/1:4,13:17:0.31:524,0,0	1/1:4,5:9:18.36:247,18,0	0/1:9,7:16:55.90:262,0,56	0/1:1,4:5:53.97:86,0,54	0/1:4,5:9:9.99:218,0,10	1/1:3,7:10:21.03:295,21,0	0/0:6,0:6:2.54:0,3,44	0/1:6,8:14:84.50:258,0,84	0/0:7,0:7:21.07:0,21,698	0/0:28,0:28:84.23:0,84,2597	1/1:3,7:10:24.01:339,24,0	0/0:16,0:16:48.16:0,48,1559	1/1:8,6:14:33.03:409,33,0	0/0:3,0:3:9.03:0,9,300
chr10	37786143	.	CATTTAAGAA	C	9560.73	PASS	AC=40;AF=0.741;AN=54;BaseQRankSum=13.129;DP=275;FS=34.314;HRun=0;HaplotypeScore=135.5850;InbreedingCoeff=0.9063;MQ=86.21;MQ0=0;MQRankSum=-13.006;QD=62.49;ReadPosRankSum=6.085;VQSLOD=2.8143;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,12:14:19.14:871,19,0	1/1:0,1:1:3.01:75,3,0	0/0:20,0:20:54.16:0,54,2291	0/0:20,0:18:45.05:0,45,1684	1/1:1,11:12:27.46:603,27,0	1/1:0,9:9:27.09:666,27,0	1/1:0,5:5:15.05:347,15,0	1/1:0,7:7:21.07:525,21,0	1/1:0,2:2:6.02:147,6,0	1/1:0,11:11:33.11:822,33,0	1/1:0,4:4:11.93:236,12,0	0/0:19,0:19:57.20:0,57,2828	1/1:0,7:7:15.05:362,15,0	1/1:2,11:13:27.98:658,28,0	1/1:1,13:14:36.12:885,36,0	1/1:1,5:6:15.05:371,15,0	1/1:0,7:7:18.06:444,18,0	1/1:0,4:4:8.95:168,9,0	1/1:0,5:5:15.05:377,15,0	1/1:0,7:7:20.99:460,21,0	./.	1/1:1,8:9:22.18:454,22,0	0/0:11,0:11:33.11:0,33,1541	0/0:27,0:27:81.26:0,81,3874	1/1:0,7:7:21.07:518,21,0	0/0:21,0:21:63.22:0,63,3100	1/1:3,6:9:24.08:570,24,0	0/0:3,0:3:9.03:0,9,406
chr10	37786152	.	A	AC	2752.62	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=13.970;DP=370;FS=9.649;HRun=1;HaplotypeScore=163.9097;InbreedingCoeff=0.9470;MQ=64.58;MQ0=1;MQRankSum=-13.498;QD=11.42;ReadPosRankSum=2.394;VQSLOD=1.4379;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:19:37.96:185,38,0	1/1:2,0:2:5.37:34,5,0	0/0:19,0:18:51.09:0,51,616	0/0:15,1:11:31.91:0,32,387	1/1:12,0:12:22.31:94,22,0	1/1:11,0:11:19.59:82,20,0	1/1:9,0:9:16.53:93,17,0	1/1:13,1:14:34.73:246,35,0	1/1:7,0:7:15.30:106,15,0	1/1:14,1:14:34.39:174,34,0	1/1:5,0:5:9.20:35,9,0	0/0:22,0:22:63.18:0,63,790	1/1:13,0:13:26.68:226,27,0	1/1:18,0:18:37.37:261,37,0	1/1:18,0:18:40.77:262,41,0	1/1:10,0:10:23.24:158,23,0	1/1:13,3:16:24.37:95,24,0	1/1:7,0:7:16.73:129,17,0	1/1:11,2:13:30.64:245,31,0	1/1:7,0:7:16.06:58,16,0	1/1:12,0:11:14.84:116,15,0	1/1:14,0:14:26.18:207,26,0	0/0:13,0:13:39.13:0,39,505	0/0:26,0:26:75.24:0,75,974	1/1:7,0:7:15.36:49,15,0	0/0:26,0:26:75.24:0,75,973	1/1:11,0:11:13.52:99,14,0	0/0:7,0:7:21.02:0,21,228
chr10	37786249	.	GAA	G	583.85	PASS	AB=0.840;AC=9;AF=0.161;AN=56;BaseQRankSum=-2.602;DP=524;FS=4.874;HRun=17;HaplotypeScore=103.8009;InbreedingCoeff=0.7696;MQ=49.36;MQ0=41;MQRankSum=0.768;QD=6.56;ReadPosRankSum=-0.434;VQSLOD=0.3574;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:30:55.79:0,56,427	0/0:11,0:10:14.90:0,15,125	0/0:14,0:7:17.78:0,18,142	0/0:8,0:6:13.70:0,14,108	0/0:21,0:23:44.51:0,45,410	0/0:21,0:18:42.52:0,43,352	0/0:15,0:11:22.79:0,23,204	0/0:22,0:23:37.66:0,38,288	0/0:16,0:16:26.70:0,27,214	0/0:21,0:20:15.11:0,15,196	0/0:16,0:16:23.73:0,24,189	1/1:12,0:11:5.15:44,5,0	0/0:16,0:16:24.38:0,24,175	0/0:20,0:20:43.52:0,44,355	0/0:15,0:14:22.32:0,22,208	0/0:17,0:17:32.81:0,33,308	0/0:33,0:29:34.65:0,35,273	0/0:33,0:23:55.53:0,56,418	0/0:20,0:20:29.59:0,30,234	0/0:9,0:11:23.90:0,24,210	0/0:12,0:10:25.43:0,25,181	0/0:9,0:9:14.22:0,14,118	1/1:3,3:5:4.73:65,5,0	1/1:10,6:17:38.53:287,39,0	0/0:20,0:19:37.76:0,38,333	0/1:17,4:18:24.88:81,0,25	0/0:13,0:12:26.81:0,27,196	1/1:21,10:32:16.88:257,17,0
chr10	37786250	.	A	AAAAG	750.54	PASS	AB=0.976;AC=14;AF=0.250;AN=56;BaseQRankSum=-3.166;DP=521;FS=5.010;HRun=0;HaplotypeScore=123.6903;InbreedingCoeff=-0.3155;MQ=49.48;MQ0=40;MQRankSum=-6.275;QD=2.77;ReadPosRankSum=-2.811;VQSLOD=1.4941;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:34,0:30:1.38:138,0,1	0/1:11,0:10:26.89:27,0,75	0/1:14,0:7:4.48:4,0,123	0/0:9,0:6:8.71:0,9,32	0/1:25,0:23:88.32:88,0,116	0/0:20,0:17:23.30:0,23,247	0/0:14,0:10:0.17:0,0,108	0/1:23,0:22:3.94:4,0,136	0/1:15,0:15:56.77:72,0,57	0/1:21,0:20:78.48:78,0,95	0/1:17,0:16:37.20:37,0,71	0/0:11,0:10:12.03:0,12,111	0/1:16,0:15:3.96:4,0,137	0/0:22,0:20:10.48:0,10,248	0/0:16,0:14:0.64:0,1,135	0/1:11,5:18:88.97:89,0,181	0/1:33,2:30:84.03:259,0,84	0/0:33,0:23:20.29:0,20,246	0/1:21,0:20:55.34:55,0,115	0/0:11,0:11:11.66:0,12,122	0/0:13,0:10:12.48:0,12,95	0/0:10,0:9:1.53:0,2,72	0/1:8,0:7:9.77:10,0,52	0/0:17,0:17:25.17:0,25,438	0/0:20,0:19:21.29:0,21,233	0/0:21,0:18:28.83:0,29,233	0/1:13,0:12:24.28:24,0,75	0/0:33,0:32:0.66:0,1,428
chr10	37786482	.	GC	G	1852.82	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.473;DP=695;FS=1.167;HRun=2;HaplotypeScore=84.3006;InbreedingCoeff=0.9829;MQ=79.25;MQ0=0;MQRankSum=-4.018;QD=33.09;ReadPosRankSum=1.631;VQSLOD=3.7441;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,55:56:99:1948,150,0	0/0:7,0:7:21.07:0,21,310	0/0:24,0:24:63.21:0,63,940	0/0:19,0:19:48.19:0,48,654	0/0:19,0:19:45.14:0,45,654	0/0:22,0:22:66.21:0,66,969	0/0:27,0:27:81.27:0,81,1212	0/0:38,0:38:99:0,111,1664	0/0:24,0:24:69.22:0,69,1000	0/0:23,0:23:63.21:0,63,941	0/0:10,0:10:18.06:0,18,269	0/0:37,0:37:99:0,111,1590	0/0:17,0:17:45.15:0,45,673	0/0:22,0:22:66.21:0,66,961	0/0:35,0:34:99:0,99,1463	0/0:29,0:29:87.29:0,87,1304	0/0:35,0:35:99:0,105,1554	0/0:12,0:12:33.11:0,33,489	0/0:21,0:21:60.19:0,60,880	0/0:8,0:8:21.07:0,21,314	0/0:66,0:66:99:0,199,2923	0/0:16,0:16:45.14:0,45,646	0/0:15,0:15:45.14:0,45,646	0/0:35,0:35:93.30:0,93,1373	0/0:15,0:15:42.14:0,42,629	0/0:27,0:27:75.22:0,75,1082	0/0:27,0:27:81.27:0,81,1211	0/0:9,0:9:27.09:0,27,405
chr10	37786591	.	TCTCTAAATGAAGATC	T	4679.49	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.781;DP=788;FS=6.515;HRun=0;HaplotypeScore=339.5807;InbreedingCoeff=0.9963;MQ=88.58;MQ0=0;MQRankSum=-9.749;QD=73.12;ReadPosRankSum=4.606;VQSLOD=3.3394;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:61,0:61:99:0,181,12232	0/0:14,0:14:42.14:0,42,3067	0/0:29,0:29:75.25:0,75,4371	0/0:32,0:31:84.24:0,84,5375	0/0:28,0:28:72.25:0,72,4790	0/0:27,0:27:81.26:0,81,5569	0/0:25,0:25:69.24:0,69,4502	0/0:48,0:48:99:0,135,8030	0/0:25,0:25:72.25:0,72,4834	0/0:25,0:25:69.24:0,69,4702	0/0:14,0:14:42.14:0,42,3073	1/1:4,26:30:63.22:2808,63,0	0/0:34,0:34:99:0,99,6989	0/0:26,0:26:75.26:0,75,5151	0/0:36,0:36:99:0,102,7352	0/0:39,0:39:99:0,111,7803	0/0:32,0:32:93.32:0,93,6671	0/0:21,0:21:60.21:0,60,3843	0/0:24,0:24:63.21:0,63,4144	0/0:18,0:18:48.16:0,48,3549	0/0:41,0:41:99:0,117,8123	0/0:16,0:16:45.14:0,45,2893	1/1:0,13:13:18.06:802,18,0	1/1:6,15:21:23.61:1069,24,0	0/0:23,0:23:63.22:0,63,4426	0/0:30,0:30:87.30:0,87,5976	0/0:29,0:29:84.29:0,84,5972	0/0:27,0:27:81.28:0,81,5932
chr10	37787330	.	C	CAA	1967.18	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=8.947;DP=565;FS=44.329;HRun=0;HaplotypeScore=100.4780;InbreedingCoeff=0.9421;MQ=76.71;MQ0=0;MQRankSum=-10.504;QD=33.92;ReadPosRankSum=-0.772;VQSLOD=1.8607;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:66.17:0,66,1042	0/0:18,0:18:54.18:0,54,872	0/0:14,0:13:36.09:0,36,532	0/0:22,0:20:51.04:0,51,697	1/1:0,11:11:30.05:478,30,0	0/0:21,0:21:54.13:0,54,825	0/0:16,0:16:42.13:0,42,658	0/0:18,0:18:54.18:0,54,854	1/1:2,13:16:25.48:467,25,0	0/0:23,0:23:63.17:0,63,967	0/0:19,0:19:51.17:0,51,830	0/0:24,0:24:72.12:0,72,1077	0/0:18,0:18:48.14:0,48,734	0/0:15,0:15:33.10:0,33,507	0/0:37,0:37:99:0,99,1540	1/1:1,20:21:2.28:774,2,0	1/1:2,8:10:25.32:398,25,0	0/0:19,0:18:54.18:0,54,875	0/0:18,0:18:54.16:0,54,834	0/0:23,0:23:66.11:0,66,988	0/0:24,0:24:63.12:0,63,934	0/0:21,0:21:60.19:0,60,940	0/0:22,0:22:63.20:0,63,987	0/0:38,0:38:99:0,105,1679	0/0:24,0:24:54.17:0,54,849	0/0:18,0:18:51.13:0,51,802	0/0:15,0:15:39.13:0,39,634	0/0:9,0:9:27.06:0,27,389
chr10	37787354	.	C	CA	8510.87	PASS	AB=0.926;AC=41;AF=0.732;AN=56;BaseQRankSum=-9.408;DP=506;FS=3.573;HRun=7;HaplotypeScore=62.3041;InbreedingCoeff=0.8707;MQ=68.98;MQ0=4;MQRankSum=2.152;QD=24.39;ReadPosRankSum=0.433;VQSLOD=5.1334;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:24.03:0,24,231	1/1:3,14:18:36.11:434,36,0	0/0:31,0:18:20.59:0,21,264	0/0:21,0:15:31.22:0,31,274	1/1:11,0:12:27.34:120,27,0	1/1:3,17:20:42.13:507,42,0	1/1:2,11:13:24.07:290,24,0	1/1:4,13:17:39.09:446,39,0	1/1:1,0:2:2.49:14,2,0	1/1:4,19:23:57.17:685,57,0	1/1:0,24:24:69.17:817,69,0	0/0:15,0:15:45.06:0,45,429	1/1:1,9:10:21.06:254,21,0	1/1:3,11:14:27.08:323,27,0	1/1:2,29:31:72.22:870,72,0	1/1:1,0:4:8.63:44,9,0	1/1:1,1:4:4.84:52,5,0	1/1:6,11:17:17.42:378,17,0	1/1:1,15:16:48.11:544,48,0	1/1:2,20:22:54.16:642,54,0	1/1:2,8:10:15.05:181,15,0	1/1:2,17:18:48.15:575,48,0	0/0:24,0:24:66.10:0,66,637	0/0:32,0:32:54.18:0,54,804	1/1:3,29:32:69.21:834,69,0	0/1:23,2:25:3.41:3,0,528	1/1:1,15:16:42.12:497,42,0	0/0:12,0:12:36.06:0,36,347
chr10	37787369	.	CA	C	236.24	PASS	AB=0.816;AC=6;AF=0.107;AN=56;BaseQRankSum=6.593;DP=517;FS=24.849;HRun=6;HaplotypeScore=89.6090;InbreedingCoeff=0.6569;MQ=62.30;MQ0=10;MQRankSum=-6.247;QD=8.75;ReadPosRankSum=1.035;VQSLOD=0.2510;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:19:23.84:0,24,306	0/0:15,0:15:36.11:0,36,456	0/0:35,0:16:21.06:0,21,276	0/0:30,0:13:20.51:0,21,221	0/1:12,1:15:4.85:174,0,5	0/0:18,0:18:51.17:0,51,670	0/0:13,0:13:30.09:0,30,380	0/0:14,0:13:30.10:0,30,394	0/1:2,1:3:8:22,0,8	0/0:21,0:20:54.09:0,54,669	0/0:27,0:27:75.23:0,75,959	0/0:13,0:13:36.12:0,36,473	0/0:9,0:9:24.08:0,24,315	0/0:12,0:12:27.09:0,27,355	0/0:29,0:29:72.23:0,72,945	1/1:1,3:4:9.02:95,9,0	1/1:3,2:5:8.45:69,8,0	0/0:13,0:14:41.92:0,42,503	0/0:21,0:20:51.11:0,51,649	0/0:20,0:20:54.18:0,54,708	0/0:9,0:9:21.07:0,21,275	0/0:21,0:20:60.19:0,60,771	0/0:26,0:26:66.21:0,66,864	0/0:32,0:32:90.28:0,90,1168	0/0:29,0:29:81.25:0,81,1052	0/0:28,0:27:69.21:0,69,892	0/0:20,0:20:57.19:0,57,750	0/0:12,0:12:36.12:0,36,470
chr10	37787394	.	AAAAACCC	A	722.75	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=6.004;DP=487;FS=4.336;HRun=0;HaplotypeScore=121.4461;InbreedingCoeff=0.7258;MQ=52.35;MQ0=10;MQRankSum=-7.479;QD=8.60;ReadPosRankSum=1.057;VQSLOD=2.2339;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:1,25:26:21.01:473,21,0	0/0:12,0:12:33.11:0,33,1014	0/0:23,0:5:12.02:0,12,285	0/1:35,0:7:3.78:4,0,358	1/1:15,0:15:30.44:303,30,0	0/0:21,0:21:60.21:0,60,2007	0/0:16,0:16:40.02:0,40,1240	0/0:19,0:18:51.16:0,51,1355	1/1:2,0:2:6.01:60,6,0	0/0:19,0:17:51.17:0,51,1679	0/0:25,0:25:69.23:0,69,2177	0/0:15,0:15:39.13:0,39,1130	0/0:6,0:6:18.06:0,18,543	0/0:9,0:9:24.08:0,24,800	0/0:22,0:22:54.17:0,54,1573	0/1:2,0:2:0:0,0,0	0/1:4,0:4:4.02:25,0,4	0/0:17,0:17:45.12:0,45,1469	0/0:15,0:14:39.12:0,39,1022	0/0:26,0:26:78.27:0,78,2712	0/0:11,0:11:30.10:0,30,961	0/0:19,0:19:54.16:0,54,1888	0/0:23,0:23:69.24:0,69,2302	0/0:24,0:24:59.34:0,59,1875	0/0:26,0:26:72.25:0,72,2364	0/0:24,0:23:60.20:0,60,2086	0/0:22,0:22:57.19:0,57,1835	0/0:9,0:9:27.09:0,27,783
chr10	37787398	.	ACC	A	158.38	PASS	AB=0.667;AC=7;AF=0.130;AN=54;BaseQRankSum=7.088;DP=489;FS=3.269;HRun=3;HaplotypeScore=80.4897;InbreedingCoeff=0.7720;MQ=53.87;MQ0=9;MQRankSum=-5.843;QD=3.68;ReadPosRankSum=1.037;VQSLOD=-0.5365;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:25:9.85:73,10,0	0/0:12,0:12:36.12:0,36,636	0/0:25,0:6:11.99:0,12,187	0/0:36,0:8:17.52:0,18,297	1/1:7,3:12:15.84:114,16,0	0/0:22,0:22:63.22:0,63,1159	0/0:15,1:16:26.85:0,27,705	0/0:23,0:22:60.08:0,60,1082	1/1:0,2:2:6.02:90,6,0	0/0:21,0:19:57.20:0,57,1048	0/0:23,0:23:69.24:0,69,1248	0/0:15,0:16:42.14:0,42,745	0/0:6,0:6:18.05:0,18,293	0/0:10,0:10:27.09:0,27,488	0/0:20,0:20:54.19:0,54,984	./.	0/1:1,0:2:13.83:14,0,15	0/0:15,0:15:45.15:0,45,814	0/0:14,0:14:36.12:0,36,651	0/0:27,0:27:81.28:0,81,1487	0/0:14,0:14:39.13:0,39,702	0/0:20,0:20:60.18:0,60,1066	0/0:24,0:24:72.24:0,72,1263	0/0:22,0:22:57.05:0,57,1048	0/0:26,0:26:72.25:0,72,1311	0/0:24,0:23:63.22:0,63,1155	0/0:21,0:21:57.18:0,57,987	0/0:9,0:9:27.09:0,27,498
chr10	37787415	.	CA	C	218.03	PASS	AC=6;AF=0.111;AN=54;BaseQRankSum=6.303;DP=496;FS=11.860;HRun=7;HaplotypeScore=73.8922;InbreedingCoeff=0.9249;MQ=59.49;MQ0=3;MQRankSum=-5.068;QD=11.48;ReadPosRankSum=-0.426;VQSLOD=1.1792;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:28:36.99:0,37,422	0/0:10,0:10:24.06:0,24,283	0/0:24,0:12:23.52:0,24,250	0/0:29,0:11:19.32:0,19,248	1/1:6,7:13:19.28:200,19,0	0/0:22,0:22:57.18:0,57,713	0/0:16,0:16:36.53:0,37,486	0/0:25,0:25:63.19:0,63,781	1/1:0,3:3:9.02:89,9,0	0/0:24,0:23:69.22:0,69,864	0/0:25,0:25:69.22:0,69,867	0/0:18,0:18:45.14:0,45,561	0/0:5,0:5:15.03:0,15,175	0/0:11,0:11:27.09:0,27,338	0/0:15,0:15:33.11:0,33,415	./.	1/1:1,2:3:6.01:56,6,0	0/0:16,0:17:50.94:0,51,602	0/0:15,0:15:36.08:0,36,425	0/0:27,0:27:81.26:0,81,1019	0/0:15,0:15:39.12:0,39,490	0/0:23,0:23:66.21:0,66,829	0/0:22,0:22:66.20:0,66,817	0/0:20,0:20:48.15:0,48,588	0/0:26,0:26:63.19:0,63,780	0/0:28,0:28:78.21:0,78,952	0/0:23,0:23:63.19:0,63,780	0/0:7,0:7:21.07:0,21,263
chr10	37787429	.	AAC	A	687.65	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=6.847;DP=493;FS=8.805;HRun=0;HaplotypeScore=74.3582;InbreedingCoeff=0.9554;MQ=66.55;MQ0=4;MQRankSum=-4.961;QD=31.26;ReadPosRankSum=-1.327;VQSLOD=4.7856;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:25:43.39:0,43,729	0/0:6,0:6:15.02:0,15,213	0/0:24,0:15:34.15:0,34,471	0/0:21,0:12:33.05:0,33,508	1/1:2,7:9:25.76:339,26,0	0/0:21,0:21:54.18:0,54,951	0/0:15,1:16:22.65:0,23,680	0/0:32,0:32:58.30:0,58,1249	1/1:0,4:4:12.04:181,12,0	0/0:28,0:27:78.25:0,78,1301	0/0:25,0:25:75.26:0,75,1322	0/0:19,0:19:51.16:0,51,856	0/0:5,0:5:15.05:0,15,270	0/0:11,0:11:30.10:0,30,503	0/0:16,0:16:39.10:0,39,594	1/1:0,4:4:9.03:136,9,0	1/1:1,4:4:12.04:181,12,0	0/0:16,0:16:45.10:0,45,727	0/0:15,0:15:42.14:0,42,734	0/0:28,0:28:81.26:0,81,1423	0/0:20,0:20:57.07:0,57,900	0/0:21,0:21:60.19:0,60,1023	0/0:22,0:22:66.18:0,66,1092	0/0:17,0:17:47.47:0,47,719	0/0:24,0:24:69.20:0,69,1159	0/0:25,0:25:75.24:0,75,1251	0/0:22,0:22:60.12:0,60,965	0/0:10,0:10:30.05:0,30,466
chr10	37787550	.	TTCTCTCTCTC	T	1571.33	PASS	AB=0.805;AC=22;AF=0.478;AN=46;BaseQRankSum=0.892;DP=361;FS=2.309;HRun=0;HaplotypeScore=112.8092;InbreedingCoeff=0.6019;MQ=76.37;MQ0=17;MQRankSum=-1.190;QD=9.88;ReadPosRankSum=1.446;VQSLOD=2.3170;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:20.31:0,20,638	./.	0/0:22,0:13:3.01:0,3,45	0/0:33,0:22:6.02:0,6,112	0/0:2,0:2:6.02:0,6,264	1/1:9,0:10:6.02:106,6,0	1/1:13,8:22:1.73:76,2,0	1/1:18,0:17:9.01:96,9,0	0/0:12,0:10:6.96:0,7,261	1/1:10,1:11:6.01:116,6,0	0/1:4,3:6:0:0,0,0	0/0:9,0:8:9.03:0,9,308	1/1:5,0:4:6.02:134,6,0	./.	1/1:13,0:13:2.73:25,3,0	0/0:12,0:12:18.06:0,18,770	0/0:19,0:18:24.06:0,24,814	1/1:9,0:9:9.03:212,9,0	1/1:17,0:17:6.02:79,6,0	./.	1/1:24,0:25:23.23:482,23,0	./.	./.	0/0:27,0:27:36.72:0,37,1493	0/0:1,6:9:0.94:0,1,1	0/1:9,1:10:67.87:68,0,662	1/1:9,0:9:12.04:340,12,0	0/0:9,0:8:13.86:0,14,288
chr10	37787945	.	G	GTC	5993.72	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-8.039;DP=719;FS=4.238;HRun=0;HaplotypeScore=85.2399;InbreedingCoeff=0.9993;MQ=62.19;MQ0=2;MQRankSum=1.128;QD=48.34;ReadPosRankSum=2.467;VQSLOD=6.2282;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,132,1942	0/0:9,0:9:24.07:0,24,333	0/0:25,0:24:56.32:0,56,743	0/0:27,0:23:66.22:0,66,916	1/1:2,30:32:69.24:1291,69,0	0/0:27,0:26:81.27:0,81,1190	0/0:24,0:24:72.23:0,72,1037	0/0:31,0:31:87.28:0,87,1259	1/1:1,12:14:33.11:614,33,0	0/0:30,0:30:84.28:0,84,1223	0/0:22,0:22:63.19:0,63,887	0/0:31,0:31:90.29:0,90,1302	0/0:21,0:21:63.21:0,63,924	0/0:14,0:14:42.11:0,42,592	0/0:21,0:21:63.21:0,63,927	1/1:0,26:26:72.25:1349,72,0	1/1:1,51:51:99:2740,148,0	0/0:35,0:35:99:0,102,1466	0/0:21,0:21:60.20:0,60,884	0/0:23,0:23:66.22:0,66,971	0/0:31,0:31:93.28:0,93,1329	0/0:14,0:14:42.14:0,42,614	0/0:22,0:22:66.22:0,66,972	0/0:24,0:24:69.23:0,69,1013	0/0:30,0:30:84.28:0,84,1230	0/0:20,0:20:60.20:0,60,884	0/0:32,0:31:93.31:0,93,1369	0/0:14,0:14:42.14:0,42,618
chr10	37790240	.	C	CG	3139.21	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=1.398;DP=618;FS=6.581;HRun=3;HaplotypeScore=98.5302;InbreedingCoeff=0.9366;MQ=72.30;MQ0=4;MQRankSum=-1.880;QD=22.42;ReadPosRankSum=3.890;VQSLOD=3.0009;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,0:34:59.47:288,59,0	0/0:3,0:3:2.90:0,3,16	0/0:28,0:25:63.17:0,63,733	0/0:23,0:22:51.15:0,51,608	1/1:3,18:20:39.12:492,39,0	0/0:27,0:27:69.35:0,69,396	0/0:29,0:28:74.75:0,75,393	0/0:29,0:29:61.26:0,61,302	1/1:2,13:15:39.13:507,39,0	0/0:22,0:22:26.93:0,27,254	0/0:11,0:11:25.98:0,26,165	0/0:23,0:23:63.19:0,63,754	0/0:16,0:16:46.24:0,46,248	0/0:10,0:10:26.84:0,27,139	0/0:23,0:23:54.32:0,54,285	1/1:3,18:21:42.14:545,42,0	1/1:2,46:48:99:1481,114,0	0/0:29,0:29:72.75:0,73,395	0/0:21,0:21:45.71:0,46,280	0/0:7,0:7:14.38:0,14,79	0/0:43,0:43:99:0,112,604	0/0:15,0:15:6.98:0,7,151	0/0:25,0:24:69.21:0,69,825	0/0:28,0:28:78.24:0,78,936	0/0:13,0:13:34.41:0,34,181	0/0:24,0:24:66.20:0,66,791	0/0:19,0:19:39.91:0,40,216	0/0:10,0:9:30.09:0,30,360
chr10	37791508	.	T	TA	2352.81	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-4.796;DP=621;FS=13.814;HRun=10;HaplotypeScore=68.7273;InbreedingCoeff=0.9837;MQ=76.93;MQ0=0;MQRankSum=0.931;QD=23.30;ReadPosRankSum=1.099;VQSLOD=3.3514;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,29:32:43.80:861,44,0	0/0:16,0:16:41.94:0,42,344	0/0:15,0:15:23.93:0,24,193	0/0:24,0:24:26.14:0,26,196	0/0:16,0:16:32.91:0,33,266	0/0:24,0:24:62.92:0,63,517	0/0:21,0:21:56.91:0,57,465	0/0:26,0:26:56.83:0,57,460	0/0:15,1:16:9.97:0,10,288	0/0:27,0:27:68.89:0,69,561	0/0:22,0:22:50.90:0,51,416	1/1:7,25:32:72.17:761,72,0	0/0:19,1:20:18.94:0,19,362	0/0:18,0:18:44.93:0,45,369	0/0:39,0:39:99:0,102,834	0/0:28,0:29:70.91:0,71,568	0/0:21,0:22:52.94:0,53,425	0/0:18,0:19:46.92:0,47,366	0/0:25,0:25:56.88:0,57,464	0/0:14,0:14:38.95:0,39,320	0/0:21,0:24:57.98:0,58,455	0/0:20,0:20:47.93:0,48,394	1/1:3,11:14:30.04:319,30,0	1/1:1,21:23:56.81:572,57,0	0/0:25,0:25:68.89:0,69,562	0/0:19,0:20:37.96:0,38,300	0/0:23,0:22:59.92:0,60,493	0/0:14,0:15:37.98:0,38,301
chr10	37791883	.	T	TG	356.84	PASS	AB=0.722;AC=3;AF=0.054;AN=56;BaseQRankSum=6.679;DP=599;FS=27.519;HRun=0;HaplotypeScore=78.0421;InbreedingCoeff=-0.0611;MQ=81.74;MQ0=1;MQRankSum=-4.537;QD=5.41;ReadPosRankSum=-0.889;VQSLOD=1.5505;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,108,1435	0/0:10,0:10:30.10:0,30,409	0/0:21,0:20:42.43:0,42,425	0/0:19,0:18:8.13:0,8,117	0/1:18,17:35:99:108,0,363	0/0:32,0:32:93.25:0,93,1231	0/0:26,0:26:78.24:0,78,1059	0/0:48,0:48:99:0,138,1859	0/1:13,3:16:74.53:75,0,378	0/0:24,0:24:69.22:0,69,950	0/0:19,0:19:57.18:0,57,768	0/0:19,0:19:57.14:0,57,730	0/0:9,0:9:27.08:0,27,362	0/0:21,0:21:63.21:0,63,881	0/0:22,0:22:66.19:0,66,875	0/1:7,8:15:99:275,0,206	0/0:5,1:6:15.01:0,15,188	0/0:16,0:16:48.16:0,48,671	0/0:20,0:20:60.16:0,60,766	0/0:28,0:28:72.19:0,72,927	0/0:14,0:14:33.08:0,33,425	0/0:23,0:23:63.18:0,63,833	0/0:19,0:19:33.18:0,33,675	0/0:18,0:17:51.13:0,51,691	0/0:21,0:21:60.18:0,60,819	0/0:27,0:27:78.24:0,78,1045	0/0:31,0:31:93.30:0,93,1284	0/0:4,0:4:12.04:0,12,168
chr10	37792306	.	ATT	A	2252.48	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=10.717;DP=459;FS=1.591;HRun=9;HaplotypeScore=51.9792;InbreedingCoeff=0.9313;MQ=64.65;MQ0=0;MQRankSum=1.692;QD=25.89;ReadPosRankSum=3.058;VQSLOD=3.0871;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:93.30:0,93,1497	0/0:7,0:7:21.07:0,21,344	0/0:6,0:6:6.02:0,6,81	0/0:7,0:5:9:0,9,120	1/1:3,18:21:45.12:524,45,0	0/0:20,0:20:57.16:0,57,906	0/0:14,0:14:39.13:0,39,638	0/0:26,0:26:66.23:0,66,1080	1/1:1,16:17:42.12:489,42,0	0/0:20,0:22:62.69:0,63,965	0/0:16,0:16:48.16:0,48,766	0/0:17,0:17:51.17:0,51,835	0/0:15,0:15:39.12:0,39,617	0/0:18,0:18:54.18:0,54,877	0/0:12,0:12:36.12:0,36,591	1/1:3,27:30:78.23:909,78,0	1/1:2,17:18:42.12:489,42,0	0/0:21,0:21:57.19:0,57,923	0/0:22,0:22:51.15:0,51,791	0/0:22,0:22:60.20:0,60,981	0/0:10,0:10:27.08:0,27,418	0/0:4,0:4:12.04:0,12,197	0/0:9,0:9:27.09:0,27,443	0/0:3,0:3:9.03:0,9,148	0/0:14,0:14:39.13:0,39,639	0/0:26,0:26:69.22:0,69,1085	0/0:17,0:17:45.15:0,45,738	0/0:11,0:11:30.10:0,30,492
chr10	37792799	.	GA	G	1104.03	PASS	AB=0.955;AC=7;AF=0.125;AN=56;BaseQRankSum=6.653;DP=581;FS=2.448;HRun=10;HaplotypeScore=68.1516;InbreedingCoeff=0.7917;MQ=72.25;MQ0=2;MQRankSum=-1.136;QD=12.40;ReadPosRankSum=3.362;VQSLOD=3.6037;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,27:31:56.67:494,57,0	0/0:11,0:11:27.07:0,27,299	0/1:20,1:19:17.74:18,0,172	0/0:12,0:13:25.44:0,25,229	0/0:12,0:12:33.09:0,33,361	0/0:21,0:21:63.11:0,63,667	0/0:21,1:23:42.94:0,43,667	0/0:30,0:30:84.22:0,84,922	0/0:14,0:14:35.99:0,36,360	0/0:29,0:29:71.86:0,72,768	0/0:16,0:17:32.92:0,33,340	0/0:20,0:20:54.13:0,54,586	0/0:13,0:13:36.10:0,36,398	0/0:20,0:20:45.12:0,45,498	0/0:28,0:28:78.21:0,78,862	0/0:23,0:23:66.16:0,66,721	0/0:44,1:45:69.19:0,69,1130	0/0:11,1:12:4.04:0,4,273	0/0:25,1:26:16.54:0,17,560	0/0:20,0:20:42.11:0,42,457	0/0:22,0:21:57.61:0,58,622	0/0:7,0:7:20.09:0,20,205	0/0:15,0:15:30.08:0,30,332	0/0:28,0:28:75.18:0,75,813	0/0:17,0:17:48.12:0,48,524	1/1:3,24:27:41.77:583,42,0	0/0:26,0:26:69.19:0,69,762	1/1:2,8:10:17.97:156,18,0
chr10	37793116	.	C	CTGG	2854.90	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=10.219;DP=680;FS=4.765;HRun=0;HaplotypeScore=98.4466;InbreedingCoeff=0.9988;MQ=86.09;MQ0=0;MQRankSum=-5.383;QD=59.48;ReadPosRankSum=2.704;VQSLOD=5.7335;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,46:48:99:2950,123,0	0/0:9,0:9:27.09:0,27,503	0/0:22,0:22:66.23:0,66,1192	0/0:22,0:22:64.63:0,65,1060	0/0:25,0:25:75.24:0,75,1337	0/0:32,0:32:96.33:0,96,1790	0/0:28,0:28:84.27:0,84,1528	0/0:25,0:25:69.22:0,69,1229	0/0:18,0:18:51.17:0,51,944	0/0:40,0:40:99:0,120,2202	0/0:21,0:21:63.22:0,63,1174	0/0:21,0:21:63.17:0,63,1074	0/0:15,0:15:45.15:0,45,824	0/0:20,0:20:60.16:0,60,1051	0/0:28,0:28:84.26:0,84,1504	0/0:31,0:31:90.31:0,90,1671	0/0:34,0:34:99:0,99,1774	0/0:21,0:21:63.20:0,63,1143	0/0:33,0:33:99:0,99,1841	0/0:24,0:24:72.25:0,72,1342	0/0:35,0:35:99:0,102,1891	0/0:13,0:13:36.12:0,36,671	0/0:13,0:13:39.13:0,39,727	0/0:21,0:21:60.21:0,60,1106	0/0:20,0:20:60.21:0,60,1119	0/0:22,0:22:63.22:0,63,1175	0/0:19,0:19:57.20:0,57,1060	0/0:20,0:20:60.19:0,60,1087
chr10	37793428	.	T	TA	230.12	PASS	AB=0.682;AC=4;AF=0.071;AN=56;BaseQRankSum=4.836;DP=492;FS=0.782;HRun=0;HaplotypeScore=81.5281;InbreedingCoeff=-0.0749;MQ=92.16;MQ0=2;MQRankSum=-1.641;QD=3.03;ReadPosRankSum=2.610;VQSLOD=2.4519;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:45.04:0,45,562	0/0:8,0:8:21.07:0,21,291	0/0:53,0:30:65.95:0,66,706	0/0:34,0:27:33.33:0,33,363	0/1:11,11:23:24.98:113,0,25	0/0:16,0:16:47.50:0,48,589	0/0:14,0:14:42.03:0,42,499	0/0:27,0:27:66.18:0,66,844	0/1:5,7:12:32.11:32,0,34	0/0:17,0:17:43.38:0,43,573	0/0:13,0:13:30.01:0,30,369	0/0:18,0:18:51.12:0,51,630	0/0:16,0:16:45.12:0,45,603	0/0:9,0:9:24.06:0,24,301	0/0:13,0:13:36.05:0,36,420	0/1:14,4:19:29.98:79,0,30	0/1:10,12:22:36.29:115,0,36	0/0:16,0:16:42.07:0,42,541	0/0:19,0:19:51.11:0,51,665	0/0:14,0:14:41.99:0,42,452	0/0:10,0:9:25.30:0,25,285	0/0:16,0:16:45.18:0,45,520	0/0:15,0:15:40.69:0,41,454	0/0:19,0:19:48.15:0,48,643	0/0:9,0:9:27.05:0,27,302	0/0:11,0:11:29.97:0,30,312	0/0:16,0:16:38.95:0,39,457	0/0:15,0:15:44.99:0,45,547
chr10	37793763	.	GAT	G	11668.59	PASS	AB=0.920;AC=39;AF=0.696;AN=56;BaseQRankSum=9.586;DP=587;FS=2.649;HRun=0;HaplotypeScore=78.5135;InbreedingCoeff=0.9087;MQ=79.19;MQ0=3;MQRankSum=-1.574;QD=27.52;ReadPosRankSum=-0.487;VQSLOD=5.6719;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,17:23:27.33:582,27,0	1/1:1,5:6:15.05:189,15,0	0/0:21,0:18:29.88:0,30,413	0/0:20,0:19:27.08:0,27,383	0/0:30,2:32:14.65:0,15,1315	1/1:6,20:26:57.18:719,57,0	1/1:5,10:15:27.08:340,27,0	1/1:7,32:40:99:1196,99,0	0/0:14,0:14:42.14:0,42,698	1/1:2,28:30:84.27:1058,84,0	1/1:3,18:20:48.15:606,48,0	0/0:11,0:11:27.09:0,27,449	1/1:2,12:14:24.08:302,24,0	1/1:1,12:13:36.12:454,36,0	1/1:4,16:20:42.13:530,42,0	0/0:20,0:20:48.16:0,48,798	0/1:21,2:23:24.58:25,0,666	1/1:7,25:32:63.20:795,63,0	1/1:4,16:20:51.16:639,51,0	1/1:3,16:19:48.15:606,48,0	1/1:3,18:21:51.16:644,51,0	1/1:1,21:23:60.19:757,60,0	0/0:20,0:20:57.13:0,57,868	0/0:25,0:25:60.16:0,60,967	1/1:2,20:22:45.14:568,45,0	1/1:5,20:24:57.12:675,57,0	1/1:2,20:22:57.18:719,57,0	1/1:0,8:8:21.07:264,21,0
chr10	37796797	.	C	CT	4688.31	PASS	AB=1.000;AC=33;AF=0.589;AN=56;BaseQRankSum=-7.061;DP=553;FS=4.298;HRun=2;HaplotypeScore=79.2332;InbreedingCoeff=0.8457;MQ=81.40;MQ0=0;MQRankSum=3.702;QD=14.25;ReadPosRankSum=-3.150;VQSLOD=3.2619;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:57.01:0,57,558	1/1:0,10:10:8.97:127,9,0	0/0:39,0:28:41.09:0,41,447	0/1:29,0:22:3.18:3,0,239	0/0:18,0:18:47.87:0,48,455	1/1:2,11:13:9.03:128,9,0	1/1:2,23:25:22.32:291,22,0	1/1:4,36:40:95.05:867,95,0	0/0:14,0:14:42:0,42,431	1/1:0,15:15:32.56:295,33,0	1/1:14,2:16:24.15:234,24,0	0/0:0,0:13:4.73:0,5,15	1/1:2,12:14:8.82:125,9,0	1/1:5,19:24:5.29:119,5,0	1/1:1,19:20:29.34:416,29,0	0/0:33,0:33:85.03:0,85,949	0/0:25,0:25:58.60:0,59,703	1/1:1,17:18:30.09:409,30,0	1/1:1,14:15:14.28:353,14,0	1/1:3,13:16:27.43:281,27,0	1/1:4,22:26:27.92:346,28,0	1/1:2,7:9:15:159,15,0	0/0:0,0:10:0:0,0,0	0/0:3,0:23:29.47:0,29,97	1/1:19,0:18:45.16:460,45,0	0/0:17,0:17:47.97:0,48,421	1/1:1,19:19:6.80:74,7,0	0/0:11,0:11:23.90:0,24,183
chr10	37796799	.	TC	T	445.90	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=0.334;DP=554;FS=0.000;HRun=11;HaplotypeScore=87.6927;InbreedingCoeff=0.7738;MQ=80.44;MQ0=2;MQRankSum=0.115;QD=6.11;ReadPosRankSum=1.694;VQSLOD=1.8835;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,3:22:4.03:0,4,183	0/0:11,0:11:10.83:0,11,74	0/0:39,3:29:1.51:0,2,168	0/0:33,0:23:24.52:0,25,203	0/0:18,0:18:28.77:0,29,261	0/0:13,0:13:14.76:0,15,100	0/0:26,0:26:29.24:0,29,185	0/0:39,0:39:44.12:0,44,338	0/0:14,0:14:7.22:0,7,217	0/0:15,0:15:12.35:0,12,96	0/0:15,0:15:31.55:0,32,228	1/1:13,0:13:5.64:32,6,0	0/0:13,0:13:11.77:0,12,75	0/0:21,0:21:10.92:0,11,70	0/0:20,0:20:32.26:0,32,196	0/0:30,3:33:50.12:0,50,684	0/0:25,0:28:65.83:0,66,623	0/0:17,0:18:29.11:0,29,166	0/0:16,0:16:35.31:0,35,252	0/0:13,0:15:26.32:0,26,172	0/0:23,0:23:29.09:0,29,172	0/0:8,0:9:11.72:0,12,75	1/1:11,0:11:0.88:2,1,0	1/1:23,0:23:33.04:146,33,0	0/0:18,0:17:32.46:0,32,230	1/1:4,12:16:16.08:244,16,0	0/0:19,0:18:11.25:0,11,73	1/1:1,9:10:20.97:172,21,0
chr10	37796951	.	ACTGT	A	4467.31	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=9.127;DP=631;FS=0.921;HRun=0;HaplotypeScore=117.9262;InbreedingCoeff=0.9996;MQ=85.83;MQ0=0;MQRankSum=-3.201;QD=43.80;ReadPosRankSum=2.576;VQSLOD=5.4435;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:75.24:0,75,1938	0/0:13,0:13:30.10:0,30,800	0/0:17,0:17:48.08:0,48,1139	0/0:25,0:25:74.92:0,75,1734	1/1:1,18:19:42.08:766,42,0	0/0:19,0:19:54.15:0,54,1320	0/0:15,0:15:45.15:0,45,1200	0/0:37,0:37:99:0,105,2705	1/1:2,16:18:48.16:896,48,0	0/0:24,0:24:66.23:0,66,1722	0/0:11,0:11:30.10:0,30,792	0/0:25,0:25:69.24:0,69,1825	0/0:17,0:17:51.16:0,51,1279	0/0:20,0:20:60.19:0,60,1544	0/0:19,0:19:57.18:0,57,1463	1/1:4,35:39:99:1797,99,0	1/1:2,24:26:54.19:1008,54,0	0/0:18,0:18:45.15:0,45,1200	0/0:25,0:25:66.19:0,66,1670	0/0:18,0:18:51.16:0,51,1297	0/0:41,0:41:99:0,120,3161	0/0:19,0:19:51.18:0,51,1360	0/0:14,0:14:33.10:0,33,800	0/0:33,0:33:99:0,99,2632	0/0:17,0:17:51.18:0,51,1352	0/0:32,0:32:93.32:0,93,2447	0/0:26,0:25:75.24:0,75,1918	0/0:18,0:18:54.19:0,54,1440
chr10	37799839	.	G	GGT	2480.15	PASS	AB=0.946;AC=38;AF=0.760;AN=50;BaseQRankSum=3.708;DP=587;FS=6.650;HRun=0;HaplotypeScore=125.3486;InbreedingCoeff=0.2773;MQ=57.07;MQ0=8;MQRankSum=-2.414;QD=5.18;ReadPosRankSum=-2.493;VQSLOD=1.7130;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:22:4.64:44,0,5	1/1:7,1:7:5.99:60,6,0	./.	./.	0/1:11,1:12:6.09:56,0,6	0/1:20,1:21:24.46:57,0,24	1/1:27,1:26:2.38:132,2,0	1/1:31,0:30:12.54:69,13,0	1/1:20,0:20:11.68:94,12,0	1/1:25,1:25:4.27:180,4,0	./.	0/0:26,0:28:35.42:0,35,312	1/1:22,0:21:21.08:168,21,0	1/1:30,2:31:8.45:202,8,0	1/1:21,2:21:17.52:160,18,0	1/1:24,1:28:23.29:346,23,0	0/1:31,3:34:10.15:225,0,10	1/1:26,0:27:19.71:185,20,0	1/1:18,0:19:9.02:91,9,0	1/1:9,1:9:12:121,12,0	1/1:32,0:35:10.53:93,11,0	0/1:14,1:13:8.70:9,0,9	0/0:15,0:16:26.91:0,27,278	0/0:24,0:26:35.74:0,36,349	1/1:11,4:15:3:28,3,0	1/1:20,1:20:23.90:228,24,0	0/1:13,0:11:6.71:63,0,7	1/1:7,0:7:4.76:23,5,0
chr10	37799876	.	GTC	G	999.88	PASS	AB=0.956;AC=24;AF=0.429;AN=56;BaseQRankSum=1.926;DP=535;FS=19.311;HRun=0;HaplotypeScore=104.9856;InbreedingCoeff=-0.3240;MQ=51.32;MQ0=15;MQRankSum=-2.513;QD=2.51;ReadPosRankSum=-3.525;VQSLOD=-0.0413;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,1:30:16.26:0,16,394	0/1:6,0:3:13.98:33,0,14	1/1:6,0:3:5.36:53,5,0	0/0:14,0:11:12.16:0,12,135	0/1:11,0:11:19.96:20,0,141	0/1:21,4:23:3.62:4,0,126	0/1:29,3:31:78.77:79,0,369	0/0:33,0:33:23.13:0,23,269	0/1:11,2:11:59.18:59,0,215	0/1:22,1:22:50.96:51,0,253	0/0:8,0:8:8.99:0,9,75	0/1:21,0:21:2.60:3,0,507	0/1:19,3:22:83.72:84,0,181	0/1:26,0:24:37.67:38,0,191	0/1:30,2:30:32.88:33,0,328	0/1:24,2:26:99:192,0,302	0/1:30,2:30:37.27:37,0,305	0/1:20,1:20:18.95:19,0,291	0/1:18,0:16:35.40:35,0,129	0/1:9,0:7:34.34:34,0,58	0/1:27,1:26:36.15:36,0,164	0/0:11,2:11:13.71:0,14,139	0/0:11,0:11:18.16:0,18,330	0/0:26,0:26:34.89:0,35,644	0/1:14,0:14:13.20:13,0,77	1/1:16,3:18:27.54:291,28,0	0/1:12,0:10:28.62:29,0,93	1/1:2,1:3:4.76:23,5,0
chr10	37799933	.	T	TC	2388.54	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-4.546;DP=496;FS=0.000;HRun=9;HaplotypeScore=67.5064;InbreedingCoeff=0.9620;MQ=73.80;MQ0=1;MQRankSum=0.008;QD=22.12;ReadPosRankSum=-0.278;VQSLOD=4.1958;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:34:68.01:0,68,579	0/0:6,0:6:18:0,18,156	0/0:10,1:10:9.29:0,9,78	0/0:20,0:19:18.60:0,19,206	1/1:7,7:14:27.07:299,27,0	0/0:18,0:18:47.99:0,48,417	0/0:29,0:29:65.92:0,66,563	0/0:18,2:21:29.96:0,30,256	1/1:4,18:22:52.02:565,52,0	0/0:14,0:14:32.99:0,33,286	0/0:9,0:9:23.99:0,24,208	0/0:14,0:14:29.98:0,30,260	0/0:21,0:21:47.97:0,48,417	0/0:28,0:28:74.98:0,75,651	0/0:33,1:36:66.82:0,67,778	1/1:3,23:26:40.12:670,40,0	1/1:8,15:22:54.07:573,54,0	0/0:9,0:9:20.99:0,21,182	0/0:9,0:9:26.99:0,27,232	0/0:8,0:8:23.98:0,24,205	0/0:28,0:28:77.94:0,78,670	0/0:11,0:11:23.98:0,24,208	0/0:15,0:15:38.93:0,39,330	0/0:19,0:20:56.02:0,56,473	0/0:14,0:14:35.99:0,36,312	1/1:10,7:17:7.03:299,7,0	0/0:13,0:13:35.99:0,36,312	1/1:0,6:6:15.04:166,15,0
chr10	37799997	.	G	GTAT	1531.76	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=-2.482;DP=497;FS=9.219;HRun=0;HaplotypeScore=86.9591;InbreedingCoeff=0.7680;MQ=74.07;MQ0=0;MQRankSum=-1.633;QD=25.11;ReadPosRankSum=3.629;VQSLOD=3.3029;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,26:31:57.19:1149,57,0	0/0:7,0:7:18.02:0,18,230	0/0:11,0:11:21.04:0,21,256	0/0:15,0:15:18.03:0,18,226	0/0:21,0:21:50.99:0,51,280	0/0:21,0:21:47.76:0,48,578	0/0:28,0:28:66.20:0,66,977	0/0:33,0:33:75.14:0,75,975	0/0:18,0:18:32.26:0,32,190	0/0:15,0:15:39.12:0,39,557	0/0:14,0:14:26.95:0,27,410	0/0:9,0:9:16.86:0,17,95	0/0:14,0:14:27.07:0,27,372	0/0:17,0:17:36.08:0,36,468	0/0:19,0:19:42.06:0,42,517	0/0:26,0:26:49.24:0,49,268	0/0:26,0:26:65.59:0,66,388	0/0:13,0:13:39.11:0,39,567	0/0:20,0:20:54.15:0,54,732	0/0:18,0:18:36.02:0,36,440	0/0:18,0:18:36.10:0,36,508	0/0:13,0:13:33.11:0,33,501	0/0:15,0:15:31.37:0,31,158	0/0:15,0:15:40.10:0,40,238	0/0:14,0:14:33.11:0,33,483	0/1:19,0:19:72.54:282,0,73	0/0:16,0:16:45.11:0,45,601	1/1:11,0:11:26.33:230,26,0
chr10	37800005	.	A	AT	3654.97	PASS	AB=0.830;AC=21;AF=0.375;AN=56;BaseQRankSum=-2.473;DP=492;FS=3.510;HRun=10;HaplotypeScore=59.4212;InbreedingCoeff=0.7580;MQ=76.06;MQ0=0;MQRankSum=-1.907;QD=15.36;ReadPosRankSum=2.070;VQSLOD=4.1193;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:31,0:31:9.12:165,9,0	0/0:6,0:6:11.98:0,12,99	0/0:13,0:13:2.37:0,2,116	0/0:16,0:16:16.02:0,16,103	1/1:2,19:21:54.14:576,54,0	0/1:18,2:20:19.06:19,0,275	0/0:26,0:26:71.87:0,72,584	0/0:29,0:29:65.90:0,66,542	1/1:6,9:15:30.03:301,30,0	0/0:15,0:15:38.92:0,39,315	0/0:11,0:11:29.96:0,30,246	1/1:3,11:14:24.06:254,24,0	0/0:12,0:12:26.96:0,27,221	0/0:15,0:15:29.93:0,30,246	0/1:18,0:18:1.70:2,0,192	1/1:6,19:25:60.11:622,60,0	1/1:7,24:31:41.52:645,42,0	0/0:14,0:14:38.91:0,39,314	0/0:20,0:20:44.91:0,45,369	0/0:16,0:16:29.95:0,30,246	0/0:14,0:14:32.95:0,33,270	0/0:12,0:12:35.94:0,36,292	1/1:2,13:15:33.08:352,33,0	1/1:2,16:18:23.48:454,23,0	0/0:14,0:14:35.95:0,36,295	0/1:5,0:18:23.14:127,0,23	0/0:21,0:21:47.89:0,48,391	1/1:5,0:12:18.11:140,18,0
chr10	37802670	.	T	TA	1605.42	PASS	AB=0.879;AC=27;AF=0.482;AN=56;BaseQRankSum=-2.233;DP=564;FS=4.009;HRun=15;HaplotypeScore=75.6456;InbreedingCoeff=-0.0224;MQ=69.29;MQ0=3;MQRankSum=1.335;QD=3.89;ReadPosRankSum=-1.786;VQSLOD=0.7377;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:32:51.50:0,52,180	0/1:9,1:10:2.61:3,0,90	0/0:18,0:11:9.41:0,9,48	0/1:15,0:9:0.99:1,0,11	1/1:13,22:38:42.30:483,42,0	0/0:21,0:22:12.45:0,12,155	0/0:12,2:14:1.21:0,1,117	0/1:32,4:37:1.48:1,0,216	0/1:6,12:19:4.98:153,0,5	0/1:26,3:29:15.29:15,0,144	0/1:15,1:18:5.11:5,0,132	1/1:6,1:18:23.59:136,24,0	0/1:16,6:22:43.43:43,0,110	0/1:8,0:8:14.15:14,0,27	0/1:11,2:13:29.83:30,0,69	1/1:8,13:21:11.99:101,12,0	1/1:6,12:21:32.65:255,33,0	0/1:13,2:16:12.81:13,0,148	0/1:11,2:13:26.73:27,0,54	0/1:25,1:26:53.55:54,0,138	0/1:8,1:10:15.84:17,0,16	0/0:21,2:23:1.71:0,2,223	1/1:17,2:21:46.54:300,47,0	1/1:3,7:13:11.67:79,12,0	0/0:20,0:20:34.88:0,35,212	0/0:16,1:19:9.90:0,10,149	0/1:18,7:28:34.24:34,0,135	0/1:15,2:17:12.22:12,0,159
chr10	37805432	.	TCA	T	20463.87	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=8.026;DP=590;FS=3.190;HRun=0;HaplotypeScore=77.8677;InbreedingCoeff=0.9954;MQ=87.67;MQ0=2;MQRankSum=-4.196;QD=44.88;ReadPosRankSum=3.467;VQSLOD=6.4953;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,31:31:84.29:1370,84,0	1/1:0,9:9:24.08:391,24,0	0/0:20,0:20:54.13:0,54,998	0/0:25,0:25:60.45:0,60,1153	0/0:16,0:16:45.15:0,45,913	1/1:0,8:8:24.08:392,24,0	1/1:0,14:14:39.13:636,39,0	1/1:0,29:29:78.27:1259,78,0	0/0:15,0:15:45.15:0,45,914	1/1:0,18:17:51.16:808,51,0	1/1:0,17:17:39.13:636,39,0	1/1:0,40:40:99:1762,108,0	1/1:0,16:16:48.16:783,48,0	1/1:0,23:24:69.24:1125,69,0	1/1:0,32:32:84.29:1370,84,0	0/0:30,0:30:90.31:0,90,1826	0/0:28,0:28:84.29:0,84,1676	1/1:0,28:28:78.22:1244,78,0	1/1:0,18:18:51.14:804,51,0	1/1:0,10:10:27.09:428,27,0	1/1:0,33:33:93.32:1506,93,0	1/1:0,13:13:33.11:538,33,0	1/1:0,5:5:15.05:245,15,0	1/1:0,35:34:93.32:1505,93,0	1/1:0,10:10:27.09:441,27,0	1/1:0,22:22:66.23:1068,66,0	1/1:0,34:34:99:1664,102,0	1/1:0,10:10:30.10:489,30,0
chr10	37805592	.	GA	G	2971.73	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-4.339;DP=832;FS=0.000;HRun=2;HaplotypeScore=115.6250;InbreedingCoeff=0.9998;MQ=88.73;MQ0=0;MQRankSum=-3.481;QD=34.56;ReadPosRankSum=2.150;VQSLOD=3.3702;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,99,1449	0/0:10,0:10:30.10:0,30,450	0/0:31,0:31:81.26:0,81,1149	0/0:30,0:30:78.15:0,78,1012	0/0:37,0:37:99:0,105,1552	0/0:18,0:18:54.17:0,54,789	0/0:33,0:33:99:0,99,1444	0/0:42,0:42:99:0,120,1791	0/0:31,0:31:93.32:0,93,1393	0/0:33,0:33:90.30:0,90,1349	0/0:25,0:25:69.22:0,69,1015	1/1:0,37:37:99:1440,111,0	0/0:28,0:28:84.27:0,84,1233	0/0:29,0:29:84.25:0,84,1235	0/0:45,0:45:99:0,135,2020	0/0:46,0:46:99:0,138,2066	0/0:31,0:31:93.32:0,93,1392	0/0:31,0:31:90.30:0,90,1342	0/0:18,0:18:51.15:0,51,726	0/0:19,0:19:57.19:0,57,854	0/0:42,0:42:99:0,123,1842	0/0:30,0:30:90.27:0,90,1293	1/1:0,17:17:48.09:623,48,0	1/1:2,30:32:81.26:1052,81,0	0/0:20,0:20:60.20:0,60,900	0/0:33,0:33:90.30:0,90,1349	0/0:37,0:37:99:0,111,1661	0/0:13,0:13:39.13:0,39,585
chr10	37806499	.	AT	A	13836.33	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=18.518;DP=663;FS=0.946;HRun=2;HaplotypeScore=93.3410;InbreedingCoeff=0.9731;MQ=74.05;MQ0=0;MQRankSum=-2.389;QD=33.91;ReadPosRankSum=2.960;VQSLOD=5.0342;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,144,2109	1/1:0,8:8:21.07:273,21,0	0/0:24,1:24:44.52:0,45,962	0/0:19,0:18:47.98:0,48,647	0/0:21,0:21:60.18:0,60,876	1/1:0,24:24:66.21:857,66,0	1/1:0,21:21:42.14:545,42,0	1/1:1,35:36:99:1269,102,0	0/0:19,0:19:57.18:0,57,829	1/1:0,37:37:99:1369,111,0	1/1:0,19:19:51.17:662,51,0	0/0:18,0:18:54.18:0,54,792	1/1:1,18:19:48.16:622,48,0	1/1:0,19:19:48.16:620,48,0	1/1:0,29:29:78.25:1012,78,0	0/0:25,0:25:75.25:0,75,1105	0/0:34,0:34:99:0,99,1460	1/1:0,21:21:54.18:701,54,0	1/1:5,15:20:3.18:469,3,0	1/1:1,18:19:54.18:701,54,0	1/1:0,33:33:93.30:1207,93,0	1/1:0,15:15:45.15:583,45,0	0/0:24,0:24:72.24:0,72,1079	0/0:21,0:21:63.21:0,63,944	1/1:1,27:28:72.23:935,72,0	1/1:1,30:31:90.28:1155,90,0	1/1:0,20:20:48.16:623,48,0	1/1:1,8:9:18.06:234,18,0
chr10	37807048	.	TA	T	4233.12	PASS	AB=0.761;AC=43;AF=0.768;AN=56;BaseQRankSum=-0.725;DP=479;FS=9.316;HRun=14;HaplotypeScore=53.8423;InbreedingCoeff=0.5964;MQ=66.70;MQ0=4;MQRankSum=0.010;QD=10.64;ReadPosRankSum=2.859;VQSLOD=3.9054;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,1:33:48.46:0,48,530	1/1:1,5:6:11.88:82,12,0	0/1:19,0:11:5.46:5,0,35	0/0:18,0:11:10.04:0,10,59	1/1:10,12:22:1.81:154,2,0	1/1:3,12:15:32.71:226,33,0	1/1:3,9:15:17.21:149,17,0	1/1:14,14:28:28.70:230,29,0	1/1:7,10:18:31.65:211,32,0	0/1:4,4:8:18.98:32,0,19	1/1:7,14:21:16.26:259,16,0	0/0:5,0:11:18.94:0,19,110	1/1:4,10:14:23.78:164,24,0	1/1:3,9:14:27.85:176,28,0	1/1:9,17:27:44.44:308,44,0	1/1:4,9:14:28.76:191,29,0	1/1:11,21:33:60.50:402,60,0	1/1:5,19:24:50.54:349,51,0	1/1:8,16:24:3.43:257,3,0	0/1:3,5:7:6.20:85,0,6	1/1:5,13:18:25.96:183,26,0	1/1:0,3:3:8.93:62,9,0	0/0:3,0:4:2.84:0,3,14	0/0:1,0:14:11.46:0,11,61	1/1:4,7:11:14.84:101,15,0	1/1:4,11:16:9.85:203,10,0	1/1:7,10:18:25.73:170,26,0	1/1:3,12:16:34.74:232,35,0
chr10	37807226	.	T	TA	344.38	PASS	AB=1.000;AC=8;AF=0.143;AN=56;BaseQRankSum=0.669;DP=355;FS=4.766;HRun=7;HaplotypeScore=41.5486;InbreedingCoeff=0.5946;MQ=86.29;MQ0=0;MQRankSum=1.908;QD=6.38;ReadPosRankSum=-0.537;VQSLOD=-0.5248;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:87.11:0,87,832	0/0:5,0:5:15.02:0,15,141	0/1:20,0:18:35.87:36,0,169	0/1:17,0:15:19.29:19,0,165	0/0:17,0:17:45.07:0,45,434	0/0:16,0:16:42.06:0,42,399	0/0:7,0:7:21.03:0,21,202	0/0:34,0:34:90.11:0,90,851	0/0:12,0:12:36.03:0,36,336	0/0:8,0:8:18.03:0,18,174	0/0:10,0:10:20.98:0,21,192	1/1:1,7:8:15.05:180,15,0	0/0:3,0:3:6:0,6,58	0/0:4,0:4:9.01:0,9,87	0/0:9,0:9:27.03:0,27,255	0/0:10,0:10:21.03:0,21,203	0/0:26,0:26:63.06:0,63,595	0/0:16,0:16:33:0,33,309	0/0:20,0:20:48.04:0,48,451	0/0:8,0:8:21.03:0,21,203	0/0:7,0:7:18.02:0,18,170	0/0:2,0:2:3:0,3,29	1/1:0,5:5:12.04:144,12,0	1/1:1,3:4:9.03:108,9,0	0/0:18,0:18:48.03:0,48,454	0/0:12,0:12:30.02:0,30,281	0/0:13,0:13:33.05:0,33,318	0/0:11,0:11:30.05:0,30,289
chr10	37808052	.	A	AT	10426.63	PASS	AB=0.588;AC=37;AF=0.661;AN=56;BaseQRankSum=-13.860;DP=569;FS=1.134;HRun=8;HaplotypeScore=51.4403;InbreedingCoeff=0.9119;MQ=81.91;MQ0=0;MQRankSum=-3.525;QD=27.22;ReadPosRankSum=-0.483;VQSLOD=5.1630;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,33:39:93.28:1073,93,0	1/1:2,8:10:24.07:276,24,0	0/0:17,0:17:26.58:0,27,289	0/0:15,0:15:23.90:0,24,218	0/0:25,0:26:74.06:0,74,660	1/1:1,18:19:54.16:623,54,0	1/1:1,9:10:24.07:277,24,0	1/1:1,26:27:78.22:889,78,0	0/0:16,0:16:48.03:0,48,439	1/1:5,24:29:47.75:804,48,0	1/1:1,20:21:56.96:623,57,0	0/0:20,0:20:48.02:0,48,439	1/1:2,14:17:42.12:479,42,0	1/1:1,9:10:15.04:171,15,0	1/1:2,21:24:60.01:672,60,0	0/0:13,0:13:36.02:0,36,330	0/0:43,0:43:99:0,108,989	1/1:5,15:19:12.01:388,12,0	1/1:8,20:29:63.02:707,63,0	1/1:2,23:25:69.13:768,69,0	0/1:3,7:10:30.86:184,0,31	1/1:2,12:14:24.07:277,24,0	0/0:16,0:16:45.02:0,45,412	0/0:20,0:20:54.02:0,54,494	1/1:2,14:16:27.08:312,27,0	1/1:1,22:23:66.20:761,66,0	1/1:4,21:25:54.16:623,54,0	1/1:0,15:15:45.13:519,45,0
chr10	37808617	.	TGG	T	11116.56	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=0.706;DP=449;FS=0.751;HRun=2;HaplotypeScore=75.8115;InbreedingCoeff=0.9935;MQ=76.38;MQ0=0;MQRankSum=-7.732;QD=44.82;ReadPosRankSum=-0.800;VQSLOD=4.5031;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:54.18:0,54,1062	1/1:1,6:7:21.06:318,21,0	0/0:11,0:11:33.07:0,33,600	0/0:12,0:12:35.15:0,35,674	0/0:19,0:19:57.20:0,57,1155	1/1:1,18:19:54.18:871,54,0	1/1:0,6:6:15.05:244,15,0	1/1:0,26:26:72.25:1174,72,0	0/0:13,0:13:39.13:0,39,789	1/1:0,16:16:45.13:687,45,0	1/1:0,8:8:21.07:342,21,0	0/0:21,0:21:63.22:0,63,1280	1/1:0,11:11:33.11:536,33,0	1/1:1,12:13:36.12:573,36,0	1/1:0,12:12:33.11:534,33,0	0/0:15,0:15:42.11:0,42,780	0/0:29,0:29:81.24:0,81,1566	1/1:0,8:8:18.06:293,18,0	1/1:1,24:25:69.62:1024,70,0	1/1:0,17:17:51.17:831,51,0	1/1:0,18:18:51.17:831,51,0	1/1:0,9:9:24.08:389,24,0	0/0:20,0:20:45.08:0,45,876	0/0:32,0:32:87.26:0,87,1711	1/1:0,24:24:66.23:1075,66,0	1/1:0,11:11:33.10:514,33,0	1/1:0,12:12:36.12:586,36,0	1/1:0,6:6:18.06:293,18,0
chr10	37808644	.	TTA	T	2238.88	PASS	AB=1.000;AC=18;AF=0.321;AN=56;BaseQRankSum=-6.162;DP=506;FS=33.548;HRun=0;HaplotypeScore=127.5493;InbreedingCoeff=0.0128;MQ=61.86;MQ0=0;MQRankSum=5.821;QD=7.39;ReadPosRankSum=-5.919;VQSLOD=0.5722;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:37,0:37:47.23:126,0,47	0/0:8,0:8:4.33:0,4,108	0/0:10,0:8:8.66:0,9,99	0/0:11,0:9:15.45:0,15,173	0/0:28,0:28:83.79:0,84,860	0/0:23,0:23:8.61:0,9,665	0/0:6,0:6:18.05:0,18,221	0/0:25,0:25:12.03:0,12,576	0/0:8,0:8:21.04:0,21,242	0/0:22,0:22:2.03:0,2,424	0/0:9,0:9:12.95:0,13,195	1/1:8,8:16:46.66:563,47,0	0/1:11,0:11:44.20:44,0,240	0/1:11,0:11:9.69:10,0,208	0/0:14,0:14:26.74:0,27,397	0/1:18,0:18:9.49:9,0,380	0/1:33,0:33:32.10:32,0,645	0/1:12,0:12:5.49:5,0,176	0/1:19,0:19:40.28:40,0,307	0/1:26,0:26:6.75:7,0,539	0/1:13,0:13:39.57:40,0,145	0/1:12,0:12:27.08:27,0,135	1/1:2,21:23:45.48:630,45,0	1/1:4,24:28:55.07:821,55,0	0/0:27,0:27:42.50:0,42,745	0/1:23,0:23:50.78:51,0,373	0/1:21,0:20:2.10:2,0,473	0/0:12,0:12:19.89:0,20,212
chr10	37808646	.	A	AT	4027.31	PASS	AB=0.813;AC=50;AF=0.893;AN=56;BaseQRankSum=-0.809;DP=516;FS=11.189;HRun=12;HaplotypeScore=116.8536;InbreedingCoeff=0.3870;MQ=61.80;MQ0=0;MQRankSum=-2.249;QD=8.17;ReadPosRankSum=0.694;VQSLOD=1.3587;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:37,0:37:8.13:74,0,8	1/1:2,0:8:16.51:76,17,0	0/0:11,0:8:5.12:0,5,48	0/0:11,0:9:2.89:0,3,8	1/1:9,20:29:19.17:480,19,0	1/1:16,0:23:29.49:156,29,0	1/1:2,0:6:11.36:57,11,0	1/1:21,0:26:25.44:177,25,0	0/1:4,6:10:25.79:99,0,26	1/1:19,0:22:33.22:214,33,0	1/1:6,0:9:11.71:59,12,0	1/1:17,1:18:5.48:31,5,0	1/1:10,0:11:11.83:92,12,0	1/1:9,0:11:15.75:93,16,0	1/1:10,0:14:13.85:63,14,0	1/1:3,16:19:39.06:379,39,0	1/1:5,27:33:53.22:678,53,0	1/1:11,0:12:10.48:66,10,0	1/1:16,0:17:17.95:98,18,0	1/1:21,0:27:29.09:213,29,0	1/1:10,0:13:24.50:142,25,0	1/1:9,0:10:16.94:93,17,0	1/1:23,0:23:10.87:29,11,0	1/1:28,0:28:8.31:10,8,0	1/1:19,0:25:32.47:196,32,0	1/1:18,1:22:9.46:173,9,0	1/1:22,0:23:10.30:102,10,0	1/1:11,0:16:24.15:177,24,0
chr10	37808897	.	AAC	A	690.21	PASS	AB=0.553;AC=3;AF=0.054;AN=56;BaseQRankSum=5.816;DP=527;FS=9.749;HRun=0;HaplotypeScore=64.2962;InbreedingCoeff=0.6450;MQ=78.72;MQ0=2;MQRankSum=-1.417;QD=25.56;ReadPosRankSum=-0.164;VQSLOD=3.7160;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:69.21:0,69,1257	0/0:3,0:3:9.03:0,9,168	0/0:12,0:12:22.13:0,22,356	0/0:18,0:18:48.12:0,48,816	0/0:17,0:17:48.15:0,48,878	0/0:24,0:24:69.22:0,69,1263	0/0:26,0:26:78.27:0,78,1459	0/0:30,0:30:81.26:0,81,1463	0/0:21,0:21:63.18:0,63,1129	0/0:17,0:17:48.14:0,48,822	0/0:13,0:13:39.03:0,39,624	0/0:18,0:18:51.17:0,51,958	0/0:13,0:13:39.11:0,39,705	0/0:19,0:19:57.18:0,57,1047	0/0:33,0:33:96.31:0,96,1769	0/0:22,0:22:66.23:0,66,1229	0/0:24,0:24:72.25:0,72,1364	0/0:26,0:26:72.25:0,72,1352	0/0:14,0:14:35.84:0,36,578	0/0:8,0:8:21.07:0,21,397	0/0:44,0:44:99:0,120,2274	0/0:3,0:3:9.03:0,9,170	0/0:12,0:12:33.11:0,33,626	0/0:17,0:17:48.16:0,48,911	0/0:13,0:13:30.08:0,30,504	0/1:4,17:20:5.27:651,0,5	0/0:26,0:26:78.27:0,78,1470	1/1:1,5:5:9.03:136,9,0
chr10	37810852	.	G	GA	8158.31	PASS	AB=1.000;AC=39;AF=0.696;AN=56;BaseQRankSum=7.702;DP=575;FS=4.798;HRun=7;HaplotypeScore=96.1194;InbreedingCoeff=0.8409;MQ=49.22;MQ0=29;MQRankSum=-11.243;QD=20.76;ReadPosRankSum=-3.502;VQSLOD=3.1862;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,42:46:99:1220,102,0	1/1:2,6:7:21.06:248,21,0	0/1:32,0:8:13.63:14,0,55	0/0:26,0:9:3.60:0,4,62	0/0:24,0:23:63.03:0,63,596	1/1:4,19:22:41.99:480,42,0	1/1:7,10:16:33.10:392,33,0	1/1:18,12:30:64.63:693,65,0	0/0:15,0:14:39.06:0,39,376	1/1:4,14:17:39.11:461,39,0	1/1:8,15:22:41.82:490,42,0	1/1:8,9:17:4.27:305,4,0	0/0:20,0:19:57.06:0,57,537	0/0:16,0:14:41.99:0,42,388	1/1:6,15:21:45.13:527,45,0	0/0:26,0:24:63.10:0,63,608	0/0:37,0:33:67.99:0,68,677	1/1:8,13:21:29.85:582,30,0	1/1:15,7:20:33.71:360,34,0	1/1:10,7:16:32.90:378,33,0	1/1:8,2:10:3.01:36,3,0	0/0:17,0:17:45.07:0,45,434	1/1:11,12:23:44.67:460,45,0	1/1:2,7:8:21.05:234,21,0	1/1:6,10:15:36.04:406,36,0	1/1:6,6:13:36.04:407,36,0	1/1:9,3:12:24.03:258,24,0	1/1:5,7:10:18.05:207,18,0
chr10	37810861	.	G	GAAA	9897.96	PASS	AB=0.688;AC=35;AF=0.625;AN=56;BaseQRankSum=6.137;DP=580;FS=11.920;HRun=10;HaplotypeScore=117.3148;InbreedingCoeff=0.9047;MQ=51.43;MQ0=19;MQRankSum=-11.219;QD=30.74;ReadPosRankSum=-6.510;VQSLOD=0.8311;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:89.79:0,90,1083	1/1:3,5:7:18.53:330,19,0	0/0:33,0:8:14.97:0,15,151	0/0:30,0:13:17.49:0,17,191	0/0:20,0:22:49.48:0,49,598	1/1:11,9:22:40.05:661,40,0	1/1:2,13:15:37.07:672,37,0	1/1:19,13:33:52.54:838,53,0	0/0:14,0:14:33.07:0,33,401	1/1:7,15:26:55.06:950,55,0	1/1:8,12:22:42.92:685,43,0	1/1:8,7:18:18.15:488,18,0	0/0:19,0:19:45.05:0,45,533	0/0:16,0:17:31.11:0,31,398	1/1:8,11:21:35.83:630,36,0	0/0:24,0:22:54.07:0,54,657	0/0:33,0:30:55.58:0,56,787	1/1:10,11:22:9.08:703,9,0	1/1:9,6:13:25.84:412,26,0	1/1:6,7:16:36.08:576,36,0	0/1:6,5:11:20.26:193,0,20	0/0:18,0:18:41.91:0,42,510	1/1:6,16:24:42.61:785,43,0	1/1:2,7:9:15.05:243,15,0	1/1:6,8:16:33.53:531,34,0	1/1:5,9:17:36.57:614,37,0	1/1:3,6:9:15.94:290,16,0	1/1:8,4:11:18.04:297,18,0
chr10	37811017	.	T	TGG	2253.50	PASS	AC=6;AF=0.111;AN=54;BaseQRankSum=-7.378;DP=587;FS=4.516;HRun=4;HaplotypeScore=74.2856;InbreedingCoeff=0.9793;MQ=84.34;MQ0=0;MQRankSum=-1.595;QD=44.19;ReadPosRankSum=1.622;VQSLOD=2.8062;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:93.29:0,93,1225	0/0:5,0:5:15.05:0,15,199	0/0:21,0:21:54.15:0,54,696	0/0:17,0:17:48.06:0,48,577	0/0:11,0:11:33.11:0,33,435	0/0:26,0:26:72.21:0,72,942	0/0:30,0:30:81.26:0,81,1080	0/0:31,0:31:81.26:0,81,1081	0/0:19,0:19:51.15:0,51,664	0/0:13,0:13:33.09:0,33,414	0/0:10,0:10:24.06:0,24,305	1/1:2,17:19:11.15:824,11,0	0/0:23,0:23:66.19:0,66,862	0/0:25,0:25:72.22:0,72,944	0/0:33,0:33:90.26:0,90,1168	0/0:22,0:22:60.19:0,60,800	0/0:36,0:36:99:0,102,1360	0/0:27,0:27:78.26:0,78,1039	0/0:20,0:20:51.16:0,51,678	0/0:16,0:16:45.15:0,45,600	0/0:48,0:48:99:0,138,1841	0/0:12,0:12:30.10:0,30,400	1/1:1,10:11:27.09:486,27,0	1/1:0,20:21:60.21:1081,60,0	0/0:23,0:23:63.20:0,63,841	0/0:14,0:14:42.14:0,42,560	0/0:20,0:20:57.17:0,57,744	./.
chr10	37811556	.	CT	C	1127.02	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=1.432;DP=262;FS=33.104;HRun=1;HaplotypeScore=53.5599;InbreedingCoeff=0.7944;MQ=75.93;MQ0=11;MQRankSum=-3.288;QD=18.18;ReadPosRankSum=0.791;VQSLOD=2.0345;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:30.08:0,30,451	1/1:0,4:4:3.01:38,3,0	0/0:43,0:18:41.86:0,42,553	0/0:60,0:32:55.23:0,55,619	0/0:6,0:6:6.02:0,6,96	1/1:4,0:4:11.95:92,12,0	1/1:5,0:5:11.97:104,12,0	1/1:6,3:9:25.97:226,26,0	0/0:7,0:7:18.03:0,18,261	1/1:1,0:1:2.97:20,3,0	1/1:4,0:4:12.01:123,12,0	0/0:6,0:6:15.05:0,15,225	0/0:6,0:5:9.03:0,9,143	0/0:9,0:9:15.03:0,15,204	1/1:4,0:4:11.94:101,12,0	0/0:14,0:14:38.73:0,39,495	0/0:9,0:9:18.06:0,18,275	1/1:2,0:2:5.96:45,6,0	1/1:0,3:3:9.02:95,9,0	1/1:0,6:6:2.98:21,3,0	1/1:3,0:3:9:96,9,0	0/0:8,0:8:8.82:0,9,142	0/0:8,0:8:15.05:0,15,237	0/0:6,0:6:3.48:0,3,49	1/1:3,0:3:8.87:59,9,0	1/1:6,0:6:17.83:127,18,0	1/1:6,0:6:17.81:140,18,0	1/1:2,0:2:5.98:47,6,0
chr10	37812539	.	AGGTCGT	A	20101.82	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=19.970;DP=797;FS=1.889;HRun=0;HaplotypeScore=175.4847;InbreedingCoeff=0.9974;MQ=85.50;MQ0=0;MQRankSum=-19.741;QD=56.95;ReadPosRankSum=-2.485;VQSLOD=4.1526;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:58:99:0,159,5424	1/1:0,15:15:45.11:1011,45,0	0/0:30,0:30:87.21:0,87,2724	0/0:31,0:32:84.29:0,84,2713	0/0:24,0:24:69.24:0,69,2343	1/1:0,15:15:39.13:919,39,0	1/1:2,26:28:66.23:1538,66,0	1/1:0,32:32:96.33:2222,96,0	0/0:50,0:50:99:0,144,5006	1/1:1,28:29:84.26:1845,84,0	1/1:1,22:23:54.14:1207,54,0	0/0:40,0:40:99:0,117,3911	0/0:28,0:28:84.24:0,84,2719	0/0:30,0:30:90.25:0,90,3088	1/1:2,43:47:99:2862,123,0	0/0:33,0:33:96.33:0,96,3393	0/0:30,0:30:87.26:0,87,2914	1/1:3,15:18:27.09:636,27,0	1/1:3,20:23:57.17:1193,57,0	1/1:2,21:23:57.20:1342,57,0	1/1:2,18:20:24.08:548,24,0	0/0:28,0:28:84.29:0,84,2857	0/0:24,0:24:69.24:0,69,2306	0/0:37,0:37:99:0,102,3572	1/1:1,22:23:57.20:1328,57,0	1/1:1,28:29:81.28:1907,81,0	1/1:1,19:20:51.18:1191,51,0	1/1:0,8:8:15.05:353,15,0
chr10	37813186	.	CTTT	C	4101.98	PASS	AB=0.603;AC=31;AF=0.554;AN=56;BaseQRankSum=9.668;DP=679;FS=0.406;HRun=16;HaplotypeScore=105.6254;InbreedingCoeff=0.9001;MQ=53.57;MQ0=29;MQRankSum=1.902;QD=11.82;ReadPosRankSum=5.273;VQSLOD=0.9537;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:14,0:40:30.92:73,0,31	1/1:2,8:10:14.92:145,15,0	0/0:40,1:9:11.16:0,11,124	0/0:39,0:10:11.82:0,12,102	0/0:19,0:21:33.35:0,33,488	1/1:6,7:15:26.72:246,27,0	1/1:9,12:22:26.49:268,26,0	1/1:17,9:26:25.90:270,26,0	0/0:17,1:18:10.96:0,11,588	1/1:10,14:25:37.83:356,38,0	1/1:5,7:13:12.65:121,13,0	0/0:24,0:23:31.28:0,31,403	0/0:16,0:18:41.73:0,42,477	0/0:25,0:26:58.27:0,58,805	1/1:7,16:24:44.73:449,45,0	0/0:23,0:30:63.03:0,63,888	0/0:36,0:42:92.19:0,92,1627	1/1:6,16:22:38.43:365,38,0	1/1:10,8:16:23.57:213,24,0	1/1:3,8:13:31.15:292,31,0	1/1:11,10:21:18.62:195,19,0	0/0:20,0:24:49.25:0,49,696	0/0:21,0:23:40.64:0,41,467	0/0:23,0:23:27.56:0,28,402	1/1:5,12:20:29.20:289,29,0	1/1:12,15:29:49.81:446,50,0	1/1:16,13:28:24.79:245,25,0	1/1:2,6:8:11.98:129,12,0
chr10	37813202	.	T	TC	4026.43	PASS	AB=1.000;AC=36;AF=0.667;AN=54;BaseQRankSum=6.590;DP=640;FS=17.820;HRun=5;HaplotypeScore=90.1013;InbreedingCoeff=0.8753;MQ=51.56;MQ0=33;MQRankSum=-2.486;QD=10.27;ReadPosRankSum=1.636;VQSLOD=0.7360;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:43:93.39:0,93,599	1/1:10,0:10:17.31:106,17,0	./.	0/1:33,0:5:0:0,0,0	0/0:22,0:22:41.63:0,42,345	1/1:19,0:16:31.77:239,32,0	1/1:20,0:18:31.61:180,32,0	1/1:17,0:16:18.77:185,19,0	0/0:21,0:21:34.93:0,35,361	1/1:24,1:24:52.81:358,53,0	0/1:13,0:13:17.23:63,0,17	1/1:8,14:21:12.03:136,12,0	0/0:19,0:19:22.65:0,23,244	0/0:23,0:23:39.28:0,39,384	1/1:25,0:24:60.87:384,61,0	0/0:26,0:26:42.26:0,42,364	0/0:46,0:43:75.87:0,76,685	1/1:30,0:27:56.06:381,56,0	1/1:13,0:11:29.66:200,30,0	1/1:23,0:22:31.85:293,32,0	1/1:15,0:15:26.79:192,27,0	0/0:24,0:24:30.74:0,31,250	1/1:7,18:24:26.37:252,26,0	1/1:7,18:25:20.42:213,20,0	1/1:18,0:18:30.77:186,31,0	1/1:29,0:28:58.17:380,58,0	1/1:22,0:20:37.01:223,37,0	1/1:6,0:6:11.14:54,11,0
chr10	37813714	.	GTACA	G	4296.48	PASS	AB=0.955;AC=17;AF=0.327;AN=52;BaseQRankSum=-12.834;DP=788;FS=2.631;HRun=0;HaplotypeScore=212.2608;InbreedingCoeff=0.8667;MQ=60.58;MQ0=9;MQRankSum=3.750;QD=16.15;ReadPosRankSum=3.954;VQSLOD=4.6241;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:41:9.07:66,9,0	0/0:20,0:20:36.03:0,36,532	./.	./.	1/1:12,22:33:45.15:702,45,0	0/0:26,0:26:24.08:0,24,392	0/0:24,0:24:9.49:0,9,69	0/0:45,0:44:30.01:0,30,347	1/1:10,24:35:63.21:964,63,0	0/0:45,0:45:81.28:0,81,1421	0/0:14,0:14:30.10:0,30,559	0/0:44,1:45:28.44:0,28,1642	1/1:16,21:38:48.16:730,48,0	1/1:14,14:28:30.10:468,30,0	0/0:42,0:42:47.19:0,47,748	1/1:11,9:20:24.08:375,24,0	1/1:12,9:21:30.10:468,30,0	0/0:25,0:25:30.10:0,30,492	0/0:20,0:20:15.05:0,15,222	0/0:34,0:34:39.22:0,39,564	0/0:27,0:27:27.09:0,27,441	1/1:10,18:28:33.11:515,33,0	0/1:20,1:21:7.68:8,0,806	0/0:21,1:22:1.35:0,1,983	0/0:25,0:25:33.11:0,33,539	0/0:31,0:31:36.02:0,36,468	0/0:32,0:32:67.29:0,67,1041	0/0:12,0:12:27.01:0,27,321
chr10	37813749	.	C	CATACATAT	6748.45	PASS	AB=0.756;AC=26;AF=0.464;AN=56;BaseQRankSum=0.013;DP=766;FS=1.977;HRun=0;HaplotypeScore=228.3411;InbreedingCoeff=0.6591;MQ=58.45;MQ0=6;MQRankSum=-3.475;QD=15.13;ReadPosRankSum=-0.364;VQSLOD=3.4972;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:38.24:0,38,379	1/1:1,0:18:33.08:360,33,0	0/0:6,0:2:5.96:0,6,47	0/0:10,0:6:17.06:0,17,116	0/0:32,0:31:69.11:0,69,1088	1/1:2,0:24:24.07:267,24,0	1/1:2,0:27:3.01:33,3,0	1/1:33,0:32:7.77:397,8,0	0/0:37,0:37:87.16:0,87,1471	0/1:40,0:39:99:204,0,931	0/1:18,0:18:99:129,0,332	0/0:38,0:38:96.23:0,96,2073	0/0:36,0:36:81.03:0,81,1216	0/0:25,0:25:57.06:0,57,820	1/1:3,0:37:23.92:476,24,0	0/0:16,0:16:42.05:0,42,594	0/0:15,0:15:39.05:0,39,604	0/1:1,0:34:20.33:267,0,20	1/1:2,0:16:42.58:385,43,0	0/1:2,0:31:17.32:302,0,17	1/1:5,0:37:27.08:301,27,0	0/0:27,0:27:57.02:0,57,793	0/0:20,0:20:60.09:0,60,1162	0/0:27,0:27:75:0,75,1392	1/1:1,0:29:33.09:368,33,0	1/1:9,26:41:96.36:2136,96,0	1/1:1,0:41:63.18:702,63,0	1/1:0,14:19:12.04:421,12,0
chr10	37814452	.	TA	T	5174.46	PASS	AB=1.000;AC=33;AF=0.589;AN=56;BaseQRankSum=6.662;DP=642;FS=2.496;HRun=13;HaplotypeScore=75.0280;InbreedingCoeff=0.9033;MQ=74.79;MQ0=1;MQRankSum=-0.552;QD=13.62;ReadPosRankSum=3.157;VQSLOD=5.5225;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:9,35:45:94.48:684,94,0	1/1:1,12:13:23.72:174,24,0	0/0:27,0:24:17.41:0,17,217	0/1:11,0:9:1.41:1,0,15	0/0:26,0:27:50.07:0,50,500	1/1:6,14:21:17.59:283,18,0	1/1:8,11:19:26.76:197,27,0	1/1:7,20:29:52.63:376,53,0	0/0:18,1:19:26.16:0,26,410	1/1:10,22:34:57.63:402,58,0	1/1:6,18:26:25.47:326,25,0	0/0:22,0:22:45.06:0,45,433	0/0:17,0:18:24.35:0,24,218	0/0:23,3:26:29.02:0,29,417	1/1:4,26:31:76.59:553,77,0	0/0:14,0:16:38.89:0,39,359	0/0:27,0:27:57.09:0,57,555	1/1:2,14:17:40.81:290,41,0	1/1:3,13:18:39.62:263,40,0	1/1:2,21:24:49.63:356,50,0	1/1:6,10:16:23.85:175,24,0	0/0:26,2:28:22.28:0,22,525	0/0:29,1:31:52.99:0,53,649	0/0:18,2:19:4.24:0,4,359	1/1:6,12:19:10.66:223,11,0	1/1:2,24:28:40.48:442,40,0	1/1:5,19:24:33.69:406,34,0	1/1:3,1:4:2.96:22,3,0
chr10	37815361	.	AAGTCTTCTCTT	A	21732.25	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=14.421;DP=567;FS=7.443;HRun=0;HaplotypeScore=200.3809;InbreedingCoeff=0.9841;MQ=75.95;MQ0=0;MQRankSum=-15.401;QD=58.89;ReadPosRankSum=2.905;VQSLOD=3.9237;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,23:31:54.10:1590,54,0	1/1:2,5:7:15.05:501,15,0	0/0:15,0:15:30.10:0,30,1318	0/0:23,0:21:39.08:0,39,1370	0/0:33,0:33:90.31:0,90,4866	1/1:7,15:22:45.15:1466,45,0	1/1:6,9:15:27.09:823,27,0	1/1:20,7:27:24.08:741,24,0	0/0:23,0:23:63.22:0,63,3304	1/1:11,14:25:51.18:1657,51,0	1/1:4,14:17:39.09:1151,39,0	1/1:4,16:20:48.16:1617,48,0	0/0:20,0:20:51.16:0,51,2600	0/0:19,0:19:54.18:0,54,2977	1/1:1,16:17:48.16:1577,48,0	0/0:23,0:23:54.17:0,54,2744	0/0:23,0:23:69.24:0,69,3626	1/1:9,6:15:21.03:626,21,0	1/1:16,4:21:21.06:585,21,0	1/1:6,14:20:45.15:1491,45,0	1/1:7,5:12:9.03:303,9,0	0/0:19,0:19:53.32:0,53,2886	1/1:5,18:23:48.16:1562,48,0	1/1:2,9:11:15.05:505,15,0	1/1:3,16:19:42.14:1415,42,0	1/1:12,15:26:51.17:1630,51,0	1/1:8,14:21:48.15:1480,48,0	1/1:7,10:17:30.10:1011,30,0
chr10	37815435	.	A	AAT	9650.89	PASS	AB=1.000;AC=32;AF=0.571;AN=56;BaseQRankSum=-8.910;DP=454;FS=0.397;HRun=0;HaplotypeScore=75.8996;InbreedingCoeff=0.8822;MQ=64.90;MQ0=0;MQRankSum=-0.642;QD=36.56;ReadPosRankSum=-1.371;VQSLOD=6.4522;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:51.09:0,51,597	1/1:2,0:2:3.01:50,3,0	0/1:3,0:3:0.03:0,0,0	0/1:9,0:9:9.27:29,0,9	0/0:23,0:23:54.12:0,54,652	1/1:1,17:18:54.10:851,54,0	1/1:1,8:9:27.09:448,27,0	1/1:11,29:40:84.22:1250,84,0	0/0:15,0:15:33.09:0,33,394	1/1:3,14:17:42.14:697,42,0	1/1:5,7:11:30.02:465,30,0	0/0:13,0:13:30.05:0,30,360	0/0:19,0:19:57.16:0,57,692	0/0:12,0:12:27.08:0,27,328	1/1:5,9:14:27.09:448,27,0	0/0:10,0:10:24.07:0,24,292	0/0:26,0:26:66.20:0,66,819	1/1:2,9:11:27.09:448,27,0	1/1:7,22:29:66.23:1087,66,0	1/1:4,13:17:39.13:596,39,0	1/1:2,12:14:36.12:598,36,0	0/0:13,0:13:15.04:0,15,179	0/0:15,0:15:24.02:0,24,273	0/0:14,0:14:30.10:0,30,378	1/1:4,12:16:42.01:621,42,0	1/1:1,18:18:51.17:847,51,0	1/1:4,18:22:54.18:880,54,0	1/1:3,9:12:23.96:336,24,0
chr10	37815598	.	A	AT	470.12	PASS	AB=0.864;AC=7;AF=0.125;AN=56;BaseQRankSum=-3.604;DP=429;FS=0.690;HRun=13;HaplotypeScore=55.2756;InbreedingCoeff=0.6679;MQ=76.74;MQ0=3;MQRankSum=-0.109;QD=9.79;ReadPosRankSum=1.125;VQSLOD=2.7251;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,1:30:48.61:0,49,463	0/0:3,0:3:8.93:0,9,62	0/0:29,0:13:22.06:0,22,130	0/0:22,0:12:3.59:0,4,30	0/0:21,0:22:40.67:0,41,273	0/0:11,0:11:20.80:0,21,142	0/0:7,0:7:8.90:0,9,62	0/0:36,1:36:14.35:0,14,311	0/0:13,0:13:4.59:0,5,171	0/0:12,0:13:19.81:0,20,129	0/0:16,0:16:14.82:0,15,212	1/1:0,8:8:21.02:195,21,0	0/0:13,0:13:26.74:0,27,182	0/0:5,0:5:13.94:0,14,88	0/0:15,0:15:38.62:0,39,263	0/0:8,0:8:23.81:0,24,164	0/0:24,1:24:56.51:0,57,390	0/0:10,0:11:25.78:0,26,168	0/0:24,0:25:57.40:0,57,373	0/0:12,0:12:32.70:0,33,225	0/1:16,3:19:14.02:14,0,205	0/0:2,0:2:2.97:0,3,21	1/1:2,7:9:17.92:155,18,0	1/1:2,10:12:27.03:251,27,0	0/0:14,0:14:32.68:0,33,224	0/0:20,0:20:52.69:0,53,368	0/0:15,0:15:10.14:0,10,200	0/0:9,0:9:19.89:0,20,129
chr10	37815692	.	C	CT	6502.44	PASS	AB=1.000;AC=44;AF=0.815;AN=54;BaseQRankSum=1.130;DP=452;FS=2.139;HRun=10;HaplotypeScore=63.8574;InbreedingCoeff=0.7175;MQ=53.51;MQ0=25;MQRankSum=1.429;QD=16.85;ReadPosRankSum=1.998;VQSLOD=5.5272;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:34.54:0,35,300	1/1:4,0:4:6.47:57,6,0	0/1:23,0:6:11.25:11,0,26	0/1:23,0:7:3.55:4,0,28	1/1:1,17:18:37.63:391,38,0	1/1:12,0:11:5.08:153,5,0	1/1:17,1:14:41.23:407,41,0	1/1:29,3:29:59.51:561,60,0	1/1:3,7:10:16.27:157,16,0	1/1:17,2:19:34.34:409,34,0	1/1:11,1:10:22.21:210,22,0	0/0:8,0:8:21.98:0,22,141	1/1:5,10:14:14.82:141,15,0	1/1:0,10:10:9.03:102,9,0	1/1:17,0:17:33.29:326,33,0	./.	1/1:14,9:22:15.57:424,16,0	1/1:16,0:16:35.92:351,36,0	1/1:24,3:24:59.06:530,59,0	1/1:11,1:11:23.65:203,24,0	1/1:7,1:7:18.02:183,18,0	1/1:3,0:3:8.98:83,9,0	0/0:15,0:14:15.94:0,16,187	0/0:12,0:11:11.89:0,12,102	1/1:13,2:14:33.95:342,34,0	1/1:32,3:32:80.35:748,80,0	1/1:21,2:23:58.70:553,59,0	1/1:9,0:8:17.88:156,18,0
chr10	37815700	.	TC	T	2987.32	PASS	AB=0.973;AC=45;AF=0.804;AN=56;BaseQRankSum=5.896;DP=436;FS=1.267;HRun=1;HaplotypeScore=71.2293;InbreedingCoeff=0.5903;MQ=50.58;MQ0=27;MQRankSum=0.763;QD=7.84;ReadPosRankSum=-1.122;VQSLOD=0.4386;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:22:13.26:0,13,260	1/1:5,0:5:13.20:95,13,0	0/1:19,0:4:2.72:3,0,5	0/1:21,2:7:13.37:13,0,22	1/1:19,0:19:25.04:177,25,0	1/1:11,0:10:23:137,23,0	1/1:18,0:14:34.86:171,35,0	1/1:31,1:29:59.76:337,60,0	1/1:8,0:8:7.36:21,7,0	1/1:19,0:18:29.55:151,30,0	1/1:12,1:11:27.73:155,28,0	0/0:8,0:8:22.89:0,23,134	1/1:11,0:10:1.93:20,2,0	1/1:10,0:10:5.58:21,6,0	1/1:15,0:15:22.57:112,23,0	0/1:11,0:11:0:0,0,0	1/1:25,0:22:0.33:106,0,0	1/1:16,0:16:36.03:213,36,0	1/1:24,0:21:52.68:312,53,0	1/1:13,0:12:30:183,30,0	1/1:8,0:7:12.16:60,12,0	1/1:3,0:3:7.40:39,7,0	0/0:14,0:13:22.22:0,22,152	0/0:10,0:9:1.56:0,2,81	1/1:14,0:13:7.79:120,8,0	1/1:30,2:29:57.23:342,57,0	1/1:23,0:23:43.79:229,44,0	1/1:9,0:9:21.18:126,21,0
chr10	37815701	.	C	CT	576.48	PASS	AB=0.989;AC=20;AF=0.370;AN=54;BaseQRankSum=-4.815;DP=431;FS=6.220;HRun=14;HaplotypeScore=79.3802;InbreedingCoeff=0.6109;MQ=50.45;MQ0=29;MQRankSum=0.077;QD=3.13;ReadPosRankSum=-0.952;VQSLOD=0.2306;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:20,1:21:0.81:1,0,93	0/0:5,0:5:2.94:0,3,9	0/0:18,1:4:2.76:0,3,14	0/1:23,0:7:0:0,0,0	1/1:15,4:19:12.95:106,13,0	0/0:11,0:10:13.82:0,14,63	0/0:17,0:13:7.62:0,8,35	0/1:32,0:29:3.18:3,0,45	1/1:6,0:7:8.66:57,9,0	0/0:18,0:17:8.50:0,9,36	0/0:13,0:11:11.17:0,11,42	1/1:6,2:8:8.99:77,9,0	1/1:10,1:10:10.70:54,11,0	1/1:10,0:10:5.94:42,6,0	0/0:14,0:15:7.66:0,8,35	./.	1/1:17,8:22:1.88:226,2,0	0/0:16,0:16:16.41:0,16,63	0/0:22,0:20:24.13:0,24,98	0/0:12,0:11:8.06:0,8,31	0/0:8,0:7:5.18:0,5,22	0/1:3,0:3:0:0,0,0	1/1:11,2:13:12:106,12,0	1/1:10,0:9:8.97:72,9,0	0/0:14,0:13:11.84:0,12,43	0/0:32,0:29:17.37:0,17,73	0/0:22,0:23:25.41:0,25,101	0/0:9,0:9:4.71:0,5,20
chr10	37815795	.	AT	A	1746.11	PASS	AB=0.654;AC=25;AF=0.446;AN=56;BaseQRankSum=1.458;DP=446;FS=17.619;HRun=14;HaplotypeScore=50.5617;InbreedingCoeff=0.0153;MQ=62.07;MQ0=27;MQRankSum=0.385;QD=6.11;ReadPosRankSum=2.233;VQSLOD=0.7666;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:5,12:18:5.64:148,0,6	1/1:3,2:4:2.96:21,3,0	0/0:27,0:8:20.84:0,21,161	0/0:7,0:2:5.98:0,6,46	0/0:22,0:22:47.91:0,48,413	0/1:4,4:12:53.06:53,0,70	0/1:3,11:15:46.12:142,0,46	0/1:8,10:17:43.17:157,0,43	0/0:12,0:14:32.70:0,33,276	0/1:6,8:18:54.45:90,0,54	0/1:6,7:19:97.01:97,0,107	1/1:1,0:5:8.14:24,8,0	0/0:9,2:14:9.44:0,9,189	0/0:11,0:14:38.35:0,38,300	0/1:3,10:14:27.16:114,0,27	0/0:8,0:8:21.68:0,22,170	0/0:39,2:39:31.23:0,31,648	1/1:4,12:17:43.64:289,44,0	0/1:10,14:19:82.79:192,0,83	0/1:4,8:13:19.03:47,0,19	0/1:4,9:13:64.71:111,0,65	0/0:9,0:10:20.82:0,21,167	1/1:6,0:10:8.09:23,8,0	1/1:1,0:7:12.21:35,12,0	0/1:3,8:11:11.30:62,0,11	0/1:11,4:14:8.10:84,0,8	0/1:8,18:26:28.76:171,0,29	1/1:2,6:8:10.93:68,11,0
chr10	37816392	.	CCT	C	78.45	PASS	AB=0.849;AC=9;AF=0.180;AN=50;BaseQRankSum=-0.740;DP=238;FS=0.000;HRun=0;HaplotypeScore=50.9921;InbreedingCoeff=0.1287;MQ=61.18;MQ0=18;MQRankSum=-0.228;QD=1.43;ReadPosRankSum=1.172;VQSLOD=1.3207;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:9:2.94:0,3,23	./.	0/0:23,0:10:13.48:0,13,131	0/0:37,0:13:2.39:0,2,69	0/0:3,0:2:3.01:0,3,50	0/0:5,0:5:6.02:0,6,67	0/0:8,0:6:9:0,9,87	0/1:10,2:11:48.79:121,0,49	0/0:5,0:5:12.02:0,12,195	0/1:7,1:7:18.07:18,0,97	1/1:7,1:7:0.47:1,0,0	0/0:14,0:12:2.91:0,3,11	0/0:3,0:2:6:0,6,81	0/0:3,0:3:5.97:0,6,76	1/1:6,1:2:0.89:2,1,0	0/0:8,0:8:21.06:0,21,340	0/0:3,0:3:9.03:0,9,157	0/0:5,0:5:14.99:0,15,144	0/1:6,2:5:31.33:31,0,67	./.	1/1:11,1:11:1.74:6,2,0	0/0:3,0:2:6.02:0,6,114	./.	0/0:15,0:13:4.33:0,4,17	0/0:2,0:1:0:0,0,0	0/0:10,0:9:23.82:0,24,209	0/0:8,0:8:10.80:0,11,120	0/0:6,0:3:8.80:0,9,58
chr10	37816426	.	CCCCTCTCT	C	1140.95	PASS	AB=1.000;AC=28;AF=0.609;AN=46;BaseQRankSum=0.142;DP=206;FS=1.970;HRun=0;HaplotypeScore=51.4115;InbreedingCoeff=0.6396;MQ=65.95;MQ0=23;MQRankSum=0.550;QD=8.91;ReadPosRankSum=0.069;VQSLOD=1.2989;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:10:20.91:0,21,165	./.	0/1:18,0:11:5.52:6,0,159	0/0:25,0:14:9.17:0,9,108	0/0:3,0:3:5.99:0,6,50	1/1:5,0:2:2.97:20,3,0	1/1:7,0:5:9:81,9,0	0/1:12,0:11:3.38:46,0,3	0/0:8,0:6:17.82:0,18,139	1/1:7,0:7:14.07:131,14,0	./.	1/1:10,0:9:23.90:245,24,0	./.	0/0:1,0:1:2.99:0,3,24	1/1:7,0:4:6:54,6,0	0/0:10,0:8:14.74:0,15,116	0/0:5,0:3:8.99:0,9,74	1/1:2,0:2:6:52,6,0	1/1:5,0:4:5.96:50,6,0	1/1:0,4:4:5.93:40,6,0	1/1:9,0:6:9:78,9,0	0/0:4,0:4:11.84:0,12,87	1/1:9,0:6:11.95:99,12,0	1/1:21,0:19:12.55:204,13,0	./.	1/1:3,4:7:14.99:127,15,0	1/1:4,0:4:9:78,9,0	./.
chr10	37817816	.	TA	T	4741.71	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-11.918;DP=572;FS=3.455;HRun=12;HaplotypeScore=73.2075;InbreedingCoeff=0.9512;MQ=64.34;MQ0=0;MQRankSum=-0.579;QD=15.10;ReadPosRankSum=1.666;VQSLOD=5.9015;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:27:54.40:0,54,302	1/1:2,4:6:11.94:93,12,0	0/0:10,0:10:11.87:0,12,91	0/0:8,0:7:9.01:0,9,86	0/0:8,0:23:43.44:0,43,256	1/1:3,24:27:53.79:418,54,0	1/1:3,11:15:31.92:238,32,0	1/1:5,17:22:50.76:389,51,0	0/0:6,0:29:42.80:0,43,242	1/1:2,22:24:62.72:485,63,0	1/1:3,16:19:38.37:284,38,0	0/0:5,0:16:17.32:0,17,101	0/0:7,0:21:31.41:0,31,168	0/0:9,0:20:22.88:0,23,124	1/1:5,17:22:29.87:232,30,0	0/0:9,0:28:48.63:0,49,266	0/0:2,0:12:22.88:0,23,125	1/1:2,14:16:35.86:279,36,0	1/1:9,18:27:49.96:372,50,0	1/1:5,24:30:61.68:464,62,0	1/1:5,17:21:20.35:341,20,0	0/0:8,0:23:37.53:0,38,192	0/0:11,0:22:28.36:0,28,168	0/0:7,0:18:34.71:0,35,214	1/1:4,23:27:50.80:395,51,0	1/1:7,20:28:58.73:440,59,0	1/1:5,17:21:2.22:196,2,0	1/1:1,6:7:14.94:116,15,0
chr10	37818194	.	GGTGTTT	G	2113.65	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=7.987;DP=682;FS=1.420;HRun=0;HaplotypeScore=146.2828;InbreedingCoeff=0.9858;MQ=88.30;MQ0=0;MQRankSum=-9.593;QD=37.74;ReadPosRankSum=1.097;VQSLOD=3.7789;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,108,3631	0/0:11,0:11:27.08:0,27,875	0/0:25,0:25:69.56:0,70,1710	0/0:30,0:30:81.21:0,81,2369	0/0:24,0:24:66.19:0,66,2148	0/0:23,0:23:69.24:0,69,2439	0/0:29,0:29:84.27:0,84,2865	0/0:33,0:33:99:0,99,3073	0/0:24,0:24:66.23:0,66,2316	0/0:29,0:29:78.26:0,78,2579	0/0:21,0:21:57.15:0,57,1783	1/1:1,16:17:48.16:1117,48,0	0/0:19,0:19:54.16:0,54,1690	0/0:19,0:19:57.20:0,57,1922	0/0:29,0:29:84.27:0,84,2804	0/0:29,0:29:78.26:0,78,2657	0/0:29,0:29:78.17:0,78,2384	0/0:30,0:30:84.27:0,84,2764	0/0:25,0:25:72.20:0,72,2226	0/0:29,0:29:75.19:0,75,2335	0/0:30,0:30:87.26:0,87,2713	0/0:26,0:26:75.24:0,75,2479	1/1:1,15:16:18.02:369,18,0	1/1:0,23:23:33.11:768,33,0	0/0:21,0:21:60.19:0,60,1956	0/0:27,0:27:78.25:0,78,2442	0/0:20,0:20:57.18:0,57,1930	0/0:4,0:4:12.04:0,12,420
chr10	37818791	.	TTGTG	T	5969.60	PASS	AB=0.854;AC=44;AF=0.846;AN=52;BaseQRankSum=5.042;DP=603;FS=0.000;HRun=0;HaplotypeScore=126.1192;InbreedingCoeff=0.5232;MQ=63.02;MQ0=15;MQRankSum=-1.474;QD=12.21;ReadPosRankSum=-0.735;VQSLOD=4.3375;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:38:21.07:0,21,343	0/1:8,0:8:0:0,0,0	./.	./.	1/1:4,0:16:6.01:56,6,0	1/1:9,11:20:12.04:190,12,0	1/1:15,10:25:5.91:95,6,0	1/1:23,6:25:15.47:168,15,0	1/1:5,0:26:48.05:446,48,0	1/1:13,15:29:48:636,48,0	1/1:7,12:17:30.09:413,30,0	1/1:5,0:16:30.03:279,30,0	1/1:7,0:21:36.04:335,36,0	1/1:3,0:14:18.02:168,18,0	1/1:8,14:23:27.09:429,27,0	1/1:9,0:18:12.01:112,12,0	0/1:9,0:22:4.40:72,0,4	1/1:13,5:19:26.55:330,27,0	1/1:14,11:26:32.23:547,32,0	1/1:7,8:16:27.05:363,27,0	1/1:9,12:22:24.02:332,24,0	1/1:7,0:13:12.01:112,12,0	0/1:8,0:11:3.59:34,0,4	1/1:8,0:24:9.01:84,9,0	1/1:12,8:20:15.03:211,15,0	0/1:29,0:27:5.89:6,0,669	1/1:4,17:22:35.60:551,36,0	0/0:17,0:16:24.06:0,24,508
chr10	37819128	.	C	CGT	2817.67	PASS	AB=0.868;AC=44;AF=0.880;AN=50;BaseQRankSum=-1.080;DP=561;FS=0.000;HRun=0;HaplotypeScore=150.2676;InbreedingCoeff=0.0741;MQ=58.91;MQ0=7;MQRankSum=0.640;QD=5.73;ReadPosRankSum=0.957;VQSLOD=3.2187;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:38,1:36:15.75:109,16,0	1/1:8,0:8:6.53:29,7,0	./.	./.	1/1:22,0:22:14.54:193,15,0	1/1:21,0:17:13.87:70,14,0	1/1:23,0:22:17.57:93,18,0	1/1:19,0:18:20.51:130,21,0	0/1:19,9:27:46.94:406,0,47	1/1:22,0:22:30.54:158,31,0	1/1:13,0:13:3.63:15,4,0	1/1:17,0:16:7.83:42,8,0	0/1:8,0:8:7.20:20,0,7	0/0:13,0:13:5.81:0,6,41	1/1:20,0:20:9.32:42,9,0	0/1:31,0:31:72.15:72,0,77	0/1:24,16:39:38.01:697,0,38	1/1:18,0:18:7.11:25,7,0	1/1:21,0:18:17.12:86,17,0	1/1:15,0:15:7.29:29,7,0	1/1:19,0:15:5.99:48,6,0	1/1:14,7:21:15.03:398,15,0	./.	1/1:24,0:22:5.67:35,6,0	1/1:16,0:14:11.54:69,12,0	1/1:22,0:21:17.16:104,17,0	1/1:18,0:16:14.63:49,15,0	1/1:5,0:5:5.25:23,5,0
chr10	37819151	.	GTGTGTGTAAGA	G	5754.62	PASS	AB=0.888;AC=41;AF=0.788;AN=52;BaseQRankSum=-2.197;DP=544;FS=0.000;HRun=0;HaplotypeScore=187.5445;InbreedingCoeff=-0.0863;MQ=42.27;MQ0=13;MQRankSum=0.509;QD=12.22;ReadPosRankSum=0.598;VQSLOD=3.5819;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:45,0:44:12.58:159,13,0	0/1:8,0:8:2.74:25,0,3	./.	0/0:27,0:9:4.26:0,4,59	1/1:6,21:26:14.53:193,15,0	1/1:25,0:21:10.60:63,11,0	1/1:19,0:18:0.85:68,1,0	1/1:15,0:14:19.29:111,19,0	0/1:22,5:26:11.65:1023,0,12	1/1:18,0:17:17.79:122,18,0	1/1:13,0:13:2.74:13,3,0	0/1:14,0:13:3.74:154,0,4	1/1:9,0:9:5.80:70,6,0	0/1:4,10:14:24.99:197,0,25	0/1:11,0:11:9.19:23,0,9	0/1:7,22:29:61.30:368,0,61	1/1:31,6:36:33.35:1898,33,0	0/1:13,0:13:3.06:25,0,3	1/1:18,0:16:13.03:92,13,0	0/1:10,0:10:8.51:9,0,25	1/1:21,0:16:5.22:42,5,0	1/1:22,1:22:19.05:563,19,0	./.	1/1:21,0:19:7.84:47,8,0	0/1:17,0:15:8.18:69,0,8	1/1:17,0:16:35.26:323,35,0	1/1:17,0:15:12.14:76,12,0	1/1:3,0:3:5.25:23,5,0
chr10	37819153	.	GTGTGTAAGA	G	5532.40	PASS	AB=1.000;AC=45;AF=0.833;AN=54;BaseQRankSum=2.016;DP=529;FS=2.248;HRun=0;HaplotypeScore=171.9454;InbreedingCoeff=0.1429;MQ=41.75;MQ0=13;MQRankSum=0.068;QD=12.00;ReadPosRankSum=3.459;VQSLOD=3.2897;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:8,36:43:14.12:389,14,0	1/1:7,0:7:9.74:87,10,0	0/0:35,0:13:6.02:0,6,161	0/0:25,0:8:3.01:0,3,56	1/1:26,0:25:13.98:103,14,0	1/1:23,0:19:13.18:160,13,0	1/1:19,0:18:23.48:191,23,0	1/1:15,0:14:22.62:194,23,0	0/1:25,0:25:41.60:554,0,42	1/1:17,0:16:34.58:330,35,0	1/1:13,0:13:5.53:52,6,0	1/1:14,0:13:20.61:275,21,0	1/1:2,6:8:5.75:161,6,0	0/1:14,0:14:38.92:129,0,39	1/1:11,0:11:13.55:104,14,0	0/1:29,0:28:99:234,0,103	0/1:37,0:36:1.06:1092,0,1	1/1:13,0:13:14.55:105,15,0	1/1:18,0:16:18.90:146,19,0	0/1:10,0:10:14.61:20,0,15	1/1:21,0:16:3.50:110,4,0	1/1:23,0:22:1.37:214,1,0	./.	1/1:20,0:18:8.69:118,9,0	1/1:17,0:15:14.05:111,14,0	1/1:17,0:16:40.69:465,41,0	1/1:17,0:15:21.75:151,22,0	1/1:2,0:2:5.74:37,6,0
chr10	37819157	.	GTAAGA	G	6229.90	PASS	AB=0.970;AC=43;AF=0.796;AN=54;BaseQRankSum=5.449;DP=509;FS=12.174;HRun=0;HaplotypeScore=144.2361;InbreedingCoeff=0.1470;MQ=41.45;MQ0=14;MQRankSum=-3.074;QD=14.09;ReadPosRankSum=0.996;VQSLOD=3.9278;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:43,0:42:12.25:175,12,0	1/1:4,2:7:12.04:230,12,0	0/0:35,0:12:24.35:0,24,215	0/0:25,0:8:13.19:0,13,64	0/1:25,0:24:20.37:20,0,37	1/1:19,3:18:13.33:277,13,0	1/1:14,4:18:24.57:458,25,0	1/1:14,0:13:20.60:335,21,0	0/1:25,0:24:99:306,0,306	1/1:16,0:15:32.65:523,33,0	1/1:11,2:13:5.74:124,6,0	1/1:11,3:13:20.96:435,21,0	1/1:8,0:8:5.69:67,6,0	0/1:13,0:13:71.18:71,0,72	1/1:8,3:11:14.26:238,14,0	0/1:27,0:26:99:143,0,201	0/1:36,1:36:99:644,0,253	1/1:11,0:11:15.05:279,15,0	1/1:15,1:15:11.44:212,11,0	1/1:7,3:10:6:60,6,0	0/1:20,0:15:0.11:105,0,0	0/1:17,4:21:99:130,0,145	./.	1/1:19,1:18:8.68:174,9,0	1/1:15,1:14:16.54:229,17,0	1/1:14,3:16:37.83:635,38,0	1/1:13,2:13:24.03:333,24,0	1/1:2,0:2:5.35:29,5,0
chr10	37819158	.	TAA	T	2208.86	PASS	AB=0.908;AC=38;AF=0.704;AN=54;BaseQRankSum=7.581;DP=482;FS=5.848;HRun=2;HaplotypeScore=139.7476;InbreedingCoeff=0.0294;MQ=41.37;MQ0=13;MQRankSum=-3.406;QD=5.63;ReadPosRankSum=-0.159;VQSLOD=-0.1695;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:42,0:41:2.92:24,0,3	1/1:3,3:7:11.99:101,12,0	0/0:35,0:12:20.69:0,21,439	0/0:24,1:8:18.06:0,18,273	0/0:24,0:24:17.94:0,18,205	1/1:11,10:17:11.34:100,11,0	1/1:9,8:17:24.28:208,24,0	0/1:10,2:11:99:124,0,142	0/1:23,0:22:89.15:89,0,379	0/1:7,7:13:28.70:189,0,29	1/1:5,7:12:5.24:48,5,0	1/1:5,9:13:20.78:160,21,0	1/1:6,0:6:0.59:11,1,0	0/1:12,0:12:17.30:17,0,72	1/1:6,5:11:11.99:102,12,0	0/1:26,0:25:25.88:26,0,174	0/1:35,1:35:99:170,0,608	1/1:3,6:9:14.90:125,15,0	0/1:6,3:8:76.69:77,0,90	1/1:6,4:10:7.45:44,7,0	0/1:16,3:15:26.17:26,0,27	0/1:22,0:21:58.14:58,0,276	./.	1/1:12,8:18:7.89:56,8,0	1/1:9,7:14:8.33:128,8,0	1/1:13,3:15:3.96:315,4,0	1/1:7,8:13:20.48:139,20,0	1/1:2,0:2:5.86:38,6,0
chr10	37819161	.	GA	G	2673.30	PASS	AB=0.808;AC=36;AF=0.667;AN=54;BaseQRankSum=8.456;DP=478;FS=10.620;HRun=2;HaplotypeScore=132.2247;InbreedingCoeff=0.0249;MQ=40.80;MQ0=20;MQRankSum=-4.157;QD=6.93;ReadPosRankSum=0.725;VQSLOD=-0.1050;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:42,0:41:19.65:20,0,20	1/1:4,3:7:12.01:122,12,0	0/0:37,0:11:33.11:0,33,525	0/0:25,0:8:21.06:0,21,290	0/0:24,0:24:17.85:0,18,219	1/1:8,14:18:11.60:131,12,0	1/1:4,11:16:21.92:216,22,0	0/1:4,7:10:99:177,0,158	0/1:18,2:19:23.89:24,0,425	0/1:3,12:14:40.50:308,0,40	1/1:5,8:12:5.23:57,5,0	1/1:3,11:13:20.55:196,21,0	0/1:6,0:6:2.63:3,0,6	0/1:12,0:12:4.32:4,0,65	1/1:3,6:11:12.02:134,12,0	0/1:27,0:26:35.59:36,0,199	0/1:27,6:32:95.74:96,0,683	1/1:3,6:9:15.04:171,15,0	0/1:3,5:7:76.93:123,0,77	1/1:3,7:10:7.74:88,8,0	0/1:8,7:13:15.47:15,0,44	0/1:19,4:22:37.41:37,0,435	./.	1/1:5,16:18:6.84:48,7,0	1/1:1,12:12:11.81:141,12,0	0/1:5,11:14:5.63:372,0,6	1/1:3,13:13:22.56:242,23,0	1/1:0,2:2:6.02:84,6,0
chr10	37819170	.	GTAAGA	G	3643.43	PASS	AB=0.855;AC=27;AF=0.500;AN=54;BaseQRankSum=4.626;DP=497;FS=3.847;HRun=0;HaplotypeScore=155.0000;InbreedingCoeff=0.5264;MQ=40.96;MQ0=22;MQRankSum=-4.029;QD=15.91;ReadPosRankSum=1.062;VQSLOD=3.4852;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:27.07:0,27,517	1/1:4,3:7:10.28:190,10,0	0/0:41,0:13:39.10:0,39,991	0/0:31,0:11:32.90:0,33,847	0/0:25,0:25:45.08:0,45,1046	1/1:13,9:18:13.34:274,13,0	1/1:12,6:17:18.91:346,19,0	0/1:11,0:10:88.17:88,0,207	0/0:20,0:20:51.20:0,51,966	0/1:12,6:17:34.03:536,0,34	0/1:7,6:12:0.77:114,0,1	1/1:10,8:17:26.98:527,27,0	0/0:7,0:7:9.03:0,9,219	0/0:14,0:14:18.03:0,18,356	1/1:6,5:11:12.04:231,12,0	0/0:28,0:28:35.83:0,36,776	0/0:31,0:31:86.45:0,86,1590	1/1:10,0:10:20.74:310,21,0	0/1:7,1:7:99:176,0,145	1/1:9,2:11:0.76:47,1,0	0/1:18,1:15:61.68:62,0,92	0/0:23,0:22:62.99:0,63,1225	./.	1/1:17,3:17:5.67:127,6,0	1/1:9,5:13:5.55:179,6,0	1/1:12,2:12:2.73:220,3,0	1/1:11,4:12:20.42:218,20,0	0/0:2,0:2:4.48:0,4,22
chr10	37819171	.	TAA	T	1189.97	PASS	AB=0.878;AC=26;AF=0.481;AN=54;BaseQRankSum=7.196;DP=456;FS=8.536;HRun=2;HaplotypeScore=137.3623;InbreedingCoeff=0.4803;MQ=41.47;MQ0=22;MQRankSum=-4.577;QD=6.13;ReadPosRankSum=2.868;VQSLOD=-0.0897;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:26.85:0,27,298	1/1:4,2:6:8.99:76,9,0	0/0:40,0:13:38.83:0,39,675	0/0:30,0:11:21.12:0,21,515	0/0:25,0:25:44.87:0,45,607	1/1:11,7:15:12.20:101,12,0	1/1:11,6:16:16.14:155,16,0	0/1:8,0:7:15.61:16,0,221	0/0:19,0:19:53.33:0,53,798	0/1:8,4:11:31.19:200,0,31	1/1:11,2:12:2.53:44,3,0	1/1:11,5:15:26.73:208,27,0	0/0:8,0:8:12.03:0,12,172	0/0:14,0:14:17.99:0,18,236	1/1:6,2:8:8.99:77,9,0	0/0:27,0:27:35.98:0,36,568	0/0:29,0:29:86.29:0,86,1332	1/1:4,5:9:19.86:152,20,0	0/1:5,2:6:62.81:63,0,107	0/1:6,2:8:0.77:12,0,1	0/1:15,1:12:25.21:25,0,62	0/0:23,0:22:61.36:0,61,804	./.	1/1:13,4:15:5.67:49,6,0	1/1:9,4:13:3.93:58,4,0	0/1:13,0:11:50.98:51,0,240	1/1:11,2:10:14.39:95,14,0	0/0:2,0:2:6.02:0,6,115
chr10	37819174	.	GA	G	1755.80	PASS	AB=0.723;AC=26;AF=0.481;AN=54;BaseQRankSum=6.408;DP=463;FS=7.099;HRun=2;HaplotypeScore=131.9457;InbreedingCoeff=0.5018;MQ=41.93;MQ0=22;MQRankSum=-5.153;QD=8.91;ReadPosRankSum=2.756;VQSLOD=1.3052;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:27.07:0,27,389	1/1:4,2:6:9:87,9,0	0/0:40,1:13:39.12:0,39,599	0/0:34,0:14:41.80:0,42,571	0/0:25,0:25:33.11:0,33,524	1/1:10,8:15:14.85:146,15,0	1/1:6,11:16:16.32:207,16,0	0/1:7,1:7:39.22:39,0,136	0/0:18,0:18:52.06:0,52,797	0/1:7,4:10:18.08:226,0,18	1/1:10,3:12:5.07:56,5,0	1/1:8,8:15:25.91:239,26,0	0/0:8,0:8:12.04:0,12,191	0/0:13,0:13:21.05:0,21,278	1/1:6,2:8:9.01:93,9,0	0/0:27,0:27:35.99:0,36,554	0/0:29,0:29:84.28:0,84,1300	1/1:0,9:9:21.03:227,21,0	0/1:4,4:7:77.68:102,0,78	0/1:2,6:8:0.50:36,0,1	0/1:6,12:15:48.05:48,0,57	0/0:23,0:22:60.08:0,60,840	./.	1/1:7,10:15:5.96:48,6,0	1/1:6,7:13:6.81:106,7,0	0/1:12,2:12:99:119,0,234	1/1:4,9:10:15.02:172,15,0	0/0:2,0:2:6.02:0,6,93
chr10	37819255	.	AG	A	5875.41	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=7.991;DP=530;FS=3.162;HRun=1;HaplotypeScore=65.3205;InbreedingCoeff=0.9744;MQ=66.57;MQ0=4;MQRankSum=2.720;QD=39.97;ReadPosRankSum=3.036;VQSLOD=5.6564;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,105,1672	0/0:3,0:3:8.96:0,9,114	0/0:8,0:6:15.03:0,15,209	0/0:14,1:11:8.96:0,9,307	1/1:0,21:21:57.15:775,57,0	0/0:13,0:13:38.96:0,39,561	0/0:27,0:27:81.24:0,81,1240	0/0:15,0:15:45.15:0,45,719	1/1:0,26:26:75.25:1049,75,0	0/0:19,0:19:57.19:0,57,904	0/0:19,0:18:54.18:0,54,863	0/0:20,0:20:54.08:0,54,797	1/1:0,14:14:39.13:544,39,0	1/1:0,18:18:54.18:755,54,0	0/0:18,0:18:54.18:0,54,863	1/1:0,16:16:48.16:671,48,0	1/1:0,25:25:72.24:1006,72,0	0/0:15,0:15:43.96:0,44,675	0/0:13,0:13:39.13:0,39,623	0/0:18,0:18:54.17:0,54,828	0/0:44,0:42:99:0,108,1699	1/1:1,26:27:78.25:1076,78,0	0/0:13,0:13:33.11:0,33,525	0/0:23,0:22:62.98:0,63,916	0/0:19,0:19:51.17:0,51,812	0/0:22,0:22:66.23:0,66,1054	0/0:15,0:14:39.08:0,39,586	0/0:6,0:6:18.06:0,18,288
chr10	37819812	.	A	ATTTTT	1921.13	PASS	AB=0.583;AC=7;AF=0.125;AN=56;BaseQRankSum=-2.155;DP=608;FS=10.914;HRun=10;HaplotypeScore=128.6428;InbreedingCoeff=0.7776;MQ=59.91;MQ0=2;MQRankSum=-5.667;QD=22.87;ReadPosRankSum=-1.753;VQSLOD=0.2216;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:35:86.55:0,87,1283	0/0:1,0:5:7.44:0,7,27	0/0:19,0:12:23.98:0,24,342	0/0:10,0:7:9.45:0,9,127	0/0:28,0:28:69.18:0,69,1093	0/0:9,0:30:50.30:0,50,217	0/0:3,0:17:19.20:0,19,106	0/0:13,0:46:18.82:0,19,296	0/0:15,0:17:48.07:0,48,683	0/0:3,0:25:48.30:0,48,174	0/0:4,0:19:30.04:0,30,200	1/1:6,9:19:22.89:501,23,0	0/0:20,0:20:38.96:0,39,627	0/0:13,0:13:26.94:0,27,378	0/0:4,0:22:42.33:0,42,151	0/0:15,0:15:42.11:0,42,623	0/0:40,0:39:99:0,102,1621	0/0:5,0:25:36.67:0,37,129	0/1:6,0:20:31.88:99,0,32	0/0:6,0:30:36.66:0,37,170	0/0:2,0:11:19.81:0,20,71	0/0:21,0:20:25.30:0,25,723	1/1:5,15:22:39.09:892,39,0	1/1:4,15:21:19.81:577,20,0	0/0:2,0:14:27.38:0,27,98	0/0:21,0:21:54.12:0,54,864	0/0:6,0:24:43.07:0,43,228	0/0:4,0:4:9.02:0,9,145
chr10	37821855	.	TGCGC	T	15817.32	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=9.955;DP=769;FS=0.997;HRun=0;HaplotypeScore=140.7050;InbreedingCoeff=0.9950;MQ=69.51;MQ0=2;MQRankSum=-5.262;QD=34.31;ReadPosRankSum=3.137;VQSLOD=5.0601;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:48:99:0,103,477	1/1:1,7:8:15.05:269,15,0	0/0:24,2:19:21.03:0,21,277	0/0:21,4:19:21.70:0,22,234	0/0:28,0:28:72.20:0,72,1550	1/1:1,19:20:45.15:793,45,0	1/1:4,30:34:48.16:860,48,0	1/1:2,20:22:60.16:952,60,0	0/0:31,0:31:87.26:0,87,2108	1/1:4,21:26:66.18:1122,66,0	1/1:3,19:22:33.11:593,33,0	1/1:1,28:29:54.11:970,54,0	0/0:26,0:26:78.27:0,78,1959	0/0:33,0:33:84.24:0,84,2026	1/1:2,24:26:51.17:916,51,0	0/0:23,0:23:57.20:0,57,1475	0/0:50,0:50:99:0,147,3672	1/1:2,22:24:26.61:736,27,0	1/1:5,13:18:36.12:615,36,0	1/1:2,16:18:30.10:539,30,0	1/1:4,44:48:69.14:1237,69,0	0/0:17,0:17:39.13:0,39,942	1/1:1,19:20:42.14:754,42,0	1/1:5,38:43:79.51:1404,80,0	1/1:4,23:27:45.15:809,45,0	1/1:3,32:35:96.31:1684,96,0	1/1:0,27:27:69.24:1239,69,0	1/1:1,13:14:18.06:323,18,0
chr10	37822507	.	CTCGG	C	176.10	PASS	AB=0.901;AC=6;AF=0.111;AN=54;BaseQRankSum=4.157;DP=771;FS=19.983;HRun=0;HaplotypeScore=74.5568;InbreedingCoeff=-0.0067;MQ=40.35;MQ0=135;MQRankSum=-2.877;QD=0.99;ReadPosRankSum=1.541;VQSLOD=0.1798;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:41,6:38:99:101,0,497	0/0:7,0:7:21.04:0,21,543	0/0:21,0:1:3.01:0,3,73	0/0:23,0:2:6.02:0,6,112	0/0:32,0:30:45.12:0,45,1178	0/0:22,1:20:27.09:0,27,781	0/0:58,4:50:27.09:0,27,732	0/0:33,0:10:30.09:0,30,661	0/0:27,0:24:12.04:0,12,347	0/0:26,0:26:78.27:0,78,2232	0/0:15,0:14:27.09:0,27,782	0/0:25,0:21:12.40:0,12,348	0/1:30,3:30:92.33:92,0,706	0/0:26,2:22:11.71:0,12,348	0/1:36,3:32:35.75:36,0,584	0/0:38,1:37:44.62:0,45,1196	0/1:23,4:22:53.71:54,0,164	./.	0/0:27,2:13:36.12:0,36,1042	0/0:21,0:18:32.90:0,33,850	1/1:31,1:19:0.21:0,0,0	0/0:25,0:23:57.12:0,57,1587	0/0:20,0:19:39.10:0,39,1057	0/0:41,2:35:3.01:0,3,87	0/0:21,0:20:21.07:0,21,609	0/0:29,0:24:72.24:0,72,1984	0/0:25,0:25:42:0,42,1153	0/0:3,0:3:6.02:0,6,128
chr10	37822982	.	G	GTT	5572.38	PASS	AB=0.850;AC=31;AF=0.554;AN=56;BaseQRankSum=2.716;DP=618;FS=6.860;HRun=12;HaplotypeScore=102.1712;InbreedingCoeff=0.7968;MQ=61.67;MQ0=10;MQRankSum=-4.156;QD=16.54;ReadPosRankSum=-4.103;VQSLOD=2.8698;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:20,1:25:35.55:308,36,0	1/1:3,3:6:18.05:232,18,0	0/1:24,0:10:7.28:7,0,80	0/0:23,0:13:15.28:0,15,120	0/0:58,0:62:99:0,112,1184	1/1:7,6:13:29.99:357,30,0	0/1:19,5:24:99:269,0,100	0/1:12,3:15:6.73:199,0,7	0/0:24,0:25:44.77:0,45,416	1/1:11,11:22:36.11:491,36,0	1/1:12,8:21:32.58:401,33,0	0/0:6,0:23:38.39:0,38,166	0/0:15,0:16:17.80:0,18,213	0/0:22,0:25:20.32:0,20,272	1/1:15,7:23:44.57:513,45,0	0/0:20,0:20:41.92:0,42,381	0/0:25,0:28:65.19:0,65,562	1/1:6,7:14:32.44:372,32,0	1/1:7,5:8:23.19:241,23,0	1/1:9,13:23:44.58:546,45,0	1/1:10,6:14:29.94:361,30,0	0/0:23,0:26:65.53:0,66,578	0/0:0,0:14:32.93:0,33,142	0/0:4,0:16:35.79:0,36,168	1/1:7,10:18:42.06:510,42,0	1/1:21,9:27:39.04:471,39,0	1/1:10,5:13:15.02:163,15,0	1/1:4,3:8:14.45:133,14,0
chr10	37823000	.	C	CT	2835.68	PASS	AB=0.703;AC=23;AF=0.411;AN=56;BaseQRankSum=3.631;DP=644;FS=2.586;HRun=9;HaplotypeScore=92.0174;InbreedingCoeff=0.3273;MQ=58.39;MQ0=42;MQRankSum=-5.501;QD=8.73;ReadPosRankSum=-2.639;VQSLOD=1.8603;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,13:17:20.85:211,21,0	1/1:2,4:6:9.02:100,9,0	0/0:30,0:10:11.61:0,12,80	0/0:30,0:13:2.74:0,3,25	0/0:53,0:53:99:0,110,935	0/1:6,10:13:4.99:178,0,5	0/1:26,9:29:84.60:85,0,264	0/1:14,8:15:99:136,0,100	0/0:29,0:28:59.58:0,60,520	0/1:13,8:19:2.03:195,0,2	0/1:7,12:19:8.27:106,0,8	0/0:26,1:26:62.91:0,63,538	0/0:15,0:15:26.99:0,27,234	0/0:22,0:21:38.95:0,39,332	1/1:10,14:20:30.06:315,30,0	0/0:19,3:19:50.98:0,51,443	0/0:33,0:33:80.97:0,81,703	1/1:11,7:16:17.99:170,18,0	0/1:11,4:10:57.07:112,0,57	0/1:11,20:26:13.02:312,0,13	0/1:10,7:14:7.99:148,0,8	0/0:25,1:26:29.70:0,30,487	0/0:18,0:18:38.99:0,39,339	0/0:12,0:12:32.95:0,33,279	1/1:7,12:16:4.05:255,4,0	1/1:9,21:26:4.41:486,4,0	0/1:10,5:9:37.06:71,0,37	1/1:7,7:11:15.01:145,15,0
chr10	37824388	.	TGAG	T	1500.26	PASS	AC=4;AF=0.074;AN=54;BaseQRankSum=7.269;DP=468;FS=29.224;HRun=0;HaplotypeScore=67.6374;InbreedingCoeff=0.9088;MQ=61.19;MQ0=2;MQRankSum=-3.144;QD=37.51;ReadPosRankSum=0.405;VQSLOD=1.7375;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,102,2131	./.	0/0:23,0:21:51.06:0,51,924	0/0:18,0:18:48.11:0,48,916	0/0:8,0:8:24.08:0,24,532	0/0:21,0:21:60.19:0,60,1267	0/0:19,0:19:54.14:0,54,1073	0/0:18,0:18:48.15:0,48,986	0/0:23,0:23:60.20:0,60,1298	0/0:9,0:9:24.08:0,24,515	0/0:2,0:2:6.02:0,6,133	0/0:26,0:26:69.23:0,69,1489	0/0:18,0:18:45.15:0,45,997	0/0:14,0:14:42.14:0,42,931	0/0:23,0:23:63.20:0,63,1355	0/0:23,0:23:66.23:0,66,1450	0/0:17,0:17:40.92:0,41,825	0/0:19,0:18:45.09:0,45,909	0/0:20,0:20:54.17:0,54,1100	0/0:4,0:4:9.03:0,9,182	0/0:13,0:13:36.12:0,36,796	0/0:7,0:6:15.04:0,15,291	0/0:7,0:7:18.06:0,18,392	0/0:26,0:26:69.21:0,69,1487	0/0:13,0:13:36.11:0,36,735	1/1:4,20:24:32.20:837,32,0	0/0:20,0:20:57.19:0,57,1249	1/1:0,16:16:48.16:784,48,0
chr10	37824612	.	C	CAAT	9580.91	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=1.535;DP=306;FS=0.538;HRun=0;HaplotypeScore=56.8465;InbreedingCoeff=0.9271;MQ=84.73;MQ0=0;MQRankSum=-9.677;QD=47.90;ReadPosRankSum=-0.735;VQSLOD=6.2726;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,6:10:18.06:396,18,0	1/1:4,5:9:21.07:456,21,0	0/0:19,0:19:33.11:0,33,531	0/0:7,0:7:12.04:0,12,193	0/0:12,0:12:36.12:0,36,579	1/1:1,6:7:18.06:396,18,0	1/1:2,5:6:12.04:264,12,0	1/1:15,21:36:90.19:1764,90,0	0/0:4,0:4:12.04:0,12,193	1/1:3,6:9:18.03:313,18,0	1/1:3,10:14:39.07:777,39,0	1/1:5,4:9:12.04:264,12,0	0/0:8,0:8:18.06:0,18,287	0/0:6,0:6:18.06:0,18,286	1/1:4,11:15:33.11:726,33,0	0/0:9,0:9:15.05:0,15,241	0/0:34,0:34:96.33:0,96,1540	1/1:8,11:19:42.13:848,42,0	1/1:4,6:9:18.06:397,18,0	1/1:1,9:10:30.10:660,30,0	1/1:2,5:7:12.04:223,12,0	0/0:7,0:7:15.05:0,15,241	1/1:0,3:3:6.02:132,6,0	1/1:2,3:5:6.02:132,6,0	1/1:2,6:8:24.08:509,24,0	1/1:2,5:7:15.05:330,15,0	1/1:0,8:8:24.08:529,24,0	1/1:0,7:7:21.07:462,21,0
chr10	37824631	.	TTA	T	3644.93	PASS	AC=30;AF=0.625;AN=48;BaseQRankSum=8.960;DP=232;FS=4.970;HRun=0;HaplotypeScore=58.4712;InbreedingCoeff=0.7728;MQ=74.90;MQ0=0;MQRankSum=-5.786;QD=26.61;ReadPosRankSum=-1.539;VQSLOD=3.9673;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:4:3.01:0,3,50	1/1:2,3:5:9.03:113,9,0	0/0:10,0:9:7.23:0,7,84	0/0:9,0:8:8.95:0,9,122	0/0:10,0:10:27.09:0,27,444	1/1:2,3:5:9.03:113,9,0	./.	1/1:8,24:32:72.22:898,72,0	0/0:3,0:3:3.01:0,3,50	1/1:1,1:2:3.01:38,3,0	1/1:4,6:10:21.05:251,21,0	1/1:0,7:7:21.07:265,21,0	0/0:5,0:5:9.03:0,9,146	0/0:4,0:4:9.03:0,9,150	1/1:3,8:11:21.07:264,21,0	0/0:3,0:3:9.03:0,9,150	0/0:37,2:39:70.51:0,71,1696	1/1:1,13:14:30.10:378,30,0	1/1:6,1:7:2.85:38,3,0	1/1:3,6:9:18.06:227,18,0	./.	./.	1/1:1,2:3:6.02:76,6,0	./.	1/1:1,9:10:27.09:341,27,0	1/1:1,3:4:9.03:114,9,0	1/1:4,4:8:15.05:188,15,0	1/1:0,10:10:27.09:341,27,0
chr10	37826062	.	TTTTC	T	799.77	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.700;DP=548;FS=10.100;HRun=0;HaplotypeScore=119.6403;InbreedingCoeff=0.9261;MQ=74.23;MQ0=11;MQRankSum=-5.480;QD=33.32;ReadPosRankSum=1.356;VQSLOD=3.3784;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,20:22:51.11:895,51,0	0/0:15,0:15:36.10:0,36,793	0/0:44,0:18:41.58:0,42,668	0/0:46,0:24:16.87:0,17,316	0/0:28,0:28:81.28:0,81,1963	0/0:21,0:21:51.17:0,51,1248	0/0:12,0:12:36.12:0,36,928	0/0:25,0:25:72.22:0,72,1633	0/0:10,0:10:24.08:0,24,608	0/0:30,0:30:90.28:0,90,2153	0/0:19,0:19:51.18:0,51,1263	0/0:6,0:6:11.59:0,12,229	0/0:10,0:10:21.07:0,21,545	0/0:12,0:12:17.53:0,18,332	0/0:14,0:14:42.12:0,42,971	0/0:11,0:11:27.09:0,27,629	0/0:28,0:28:75.21:0,75,1677	0/0:26,0:25:66.08:0,66,1225	0/0:19,0:17:48.10:0,48,1084	0/0:21,0:21:60.21:0,60,1448	0/0:8,0:8:24.08:0,24,615	0/0:6,0:6:15.05:0,15,388	0/0:21,0:21:54.18:0,54,1388	0/0:15,0:15:40.02:0,40,958	0/0:18,0:18:48.15:0,48,1181	0/0:24,0:24:72.23:0,72,1827	0/0:25,0:25:75.23:0,75,1790	0/0:9,0:9:27.08:0,27,501
chr10	37826077	.	A	AT	1249.51	PASS	AB=0.773;AC=13;AF=0.232;AN=56;BaseQRankSum=-6.622;DP=563;FS=7.837;HRun=10;HaplotypeScore=110.4710;InbreedingCoeff=0.5260;MQ=74.24;MQ0=14;MQRankSum=1.264;QD=7.48;ReadPosRankSum=-2.302;VQSLOD=1.4824;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:24:30.26:0,30,89	0/0:13,0:13:0.80:0,1,86	0/1:67,0:23:12.37:12,0,110	0/0:62,0:27:16.56:0,17,137	1/1:5,25:30:68.75:627,69,0	0/0:19,0:19:41.24:0,41,211	0/0:12,0:12:23.02:0,23,129	0/0:22,0:22:33.29:0,33,162	1/1:6,1:7:3.01:32,3,0	0/0:29,0:29:56.71:0,57,298	0/0:19,0:19:36.34:0,36,185	0/0:6,0:6:6.71:0,7,39	0/1:5,3:8:15.97:26,0,16	1/1:1,7:8:6.02:64,6,0	0/0:14,0:14:28.29:0,28,144	1/1:4,7:11:12.03:128,12,0	0/1:8,18:26:25.74:368,0,26	0/0:17,0:17:25.56:0,26,126	0/0:14,0:13:0.25:0,0,101	0/0:20,0:20:47.66:0,48,235	0/0:7,0:7:14.48:0,14,85	1/1:4,6:10:17.52:159,18,0	0/0:23,0:23:45.70:0,46,250	0/0:18,0:18:28.20:0,28,147	0/0:20,0:20:31.41:0,31,162	0/0:26,0:26:55.12:0,55,268	0/0:25,0:25:59.87:0,60,326	0/0:3,0:3:5.82:0,6,36
chr10	37826087	.	TG	T	5162.78	PASS	AB=0.778;AC=36;AF=0.643;AN=56;BaseQRankSum=-4.253;DP=555;FS=2.729;HRun=9;HaplotypeScore=98.5441;InbreedingCoeff=0.8297;MQ=76.00;MQ0=18;MQRankSum=0.510;QD=16.18;ReadPosRankSum=5.300;VQSLOD=4.9880;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:24:33.62:34,0,42	1/1:3,10:14:22.39:169,22,0	0/0:77,0:24:37.44:0,37,281	0/0:61,1:27:37.91:0,38,261	0/0:30,0:30:64.88:0,65,478	1/1:3,18:21:39.02:356,39,0	1/1:2,6:8:18:162,18,0	1/1:2,15:17:47.85:401,48,0	0/0:7,0:7:20.94:0,21,168	1/1:5,22:27:65.95:574,66,0	1/1:2,15:17:41.74:344,42,0	0/1:2,8:10:1.28:22,0,1	0/0:9,0:9:17.90:0,18,140	0/0:8,0:8:11.95:0,12,93	1/1:2,13:15:24:216,24,0	0/0:9,0:9:14.95:0,15,115	0/0:22,0:22:50.85:0,51,427	1/1:0,15:15:27.01:243,27,0	1/1:4,10:13:22.02:245,22,0	1/1:3,19:22:52.03:464,52,0	1/1:3,4:6:9:82,9,0	0/0:11,0:11:17.91:0,18,135	1/1:5,16:22:32.38:302,32,0	1/1:4,14:18:24.48:220,24,0	1/1:3,11:14:30.48:271,30,0	1/1:2,23:25:69.24:597,69,0	1/1:5,19:24:48.02:434,48,0	1/1:1,2:3:3:27,3,0
chr10	37826096	.	G	GA	4456.81	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=1.516;DP=514;FS=0.952;HRun=1;HaplotypeScore=96.9145;InbreedingCoeff=0.9643;MQ=72.28;MQ0=17;MQRankSum=-1.300;QD=14.02;ReadPosRankSum=2.456;VQSLOD=4.3512;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,16:25:65.98:674,66,0	1/1:14,0:14:19.09:174,19,0	0/0:54,0:16:30.88:0,31,262	0/0:48,0:22:21.60:0,22,200	0/0:25,0:25:63.73:0,64,486	1/1:21,0:21:45.07:297,45,0	1/1:9,0:9:23.45:152,23,0	1/1:21,0:21:55.06:359,55,0	0/0:8,0:8:23.98:0,24,250	1/1:22,0:22:54.30:345,54,0	1/1:17,0:17:39.91:239,40,0	1/1:14,0:14:18.17:140,18,0	0/0:9,0:9:20.84:0,21,211	0/0:5,0:5:11.92:0,12,114	1/1:14,0:14:26.25:163,26,0	0/0:9,0:9:17.94:0,18,152	0/0:19,0:19:45.46:0,45,354	1/1:17,0:17:30.70:176,31,0	1/1:13,0:12:16.20:159,16,0	1/1:20,0:20:35.43:210,35,0	1/1:6,0:5:11.74:73,12,0	0/0:10,0:11:19.20:0,19,129	1/1:20,0:20:25.60:217,26,0	1/1:19,0:19:30.24:190,30,0	1/1:13,0:13:32.12:198,32,0	1/1:28,0:28:55.45:406,55,0	1/1:20,0:20:43.66:245,44,0	1/1:3,0:3:5.90:40,6,0
chr10	37826759	.	GTTA	G	488.36	PASS	AB=0.824;AC=18;AF=0.900;AN=20;DP=193;FS=0.000;HRun=0;HaplotypeScore=29.2992;InbreedingCoeff=0.2066;MQ=60.09;MQ0=2;QD=4.70;VQSLOD=0.9574;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:10,0:11:2.80:13,3,0	1/1:1,0:3:2.98:21,3,0	./.	./.	1/1:2,2:4:3.01:38,3,0	./.	./.	./.	./.	./.	./.	./.	1/1:3,2:5:3.01:38,3,0	./.	./.	./.	1/1:10,7:17:18.06:229,18,0	0/1:12,0:16:0:0,0,0	./.	./.	./.	./.	./.	./.	1/1:7,0:9:5.95:42,6,0	0/1:6,0:7:0:0,0,0	1/1:3,0:7:8.93:63,9,0	1/1:18,5:22:9.03:115,9,0
chr10	37827968	.	ATC	A	12761.50	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=12.127;DP=568;FS=2.287;HRun=0;HaplotypeScore=72.7683;InbreedingCoeff=0.9967;MQ=90.87;MQ0=1;MQRankSum=-2.872;QD=38.09;ReadPosRankSum=1.689;VQSLOD=6.4942;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,126,2278	1/1:1,8:9:24.08:344,24,0	0/0:25,0:25:69.23:0,69,1192	0/0:25,0:26:63.14:0,63,1067	0/0:16,0:16:48.15:0,48,848	1/1:1,14:15:42.14:602,42,0	1/1:1,30:31:78.26:1118,78,0	1/1:2,25:27:75.24:1054,75,0	0/0:24,0:24:69.19:0,69,1217	1/1:2,19:21:54.18:769,54,0	1/1:0,10:10:27.09:386,27,0	1/1:0,23:23:69.23:981,69,0	0/0:17,0:17:51.17:0,51,927	0/0:17,0:17:45.15:0,45,823	1/1:0,15:15:38.93:559,39,0	0/0:16,0:16:45.15:0,45,825	0/0:36,0:36:99:0,99,1814	1/1:1,24:25:75.24:1059,75,0	1/1:0,10:10:27.09:384,27,0	1/1:2,10:12:27.09:387,27,0	1/1:1,41:41:99:1548,108,0	0/0:11,0:11:33.11:0,33,605	1/1:2,7:9:18.06:242,18,0	1/1:4,28:32:75.25:1075,75,0	1/1:0,11:11:30.10:423,30,0	1/1:0,25:25:75.24:1058,75,0	1/1:0,12:12:36.12:516,36,0	1/1:0,6:6:18.06:258,18,0
chr10	37828479	.	CT	C	6906.22	PASS	AB=0.755;AC=36;AF=0.643;AN=56;BaseQRankSum=-14.187;DP=624;FS=9.724;HRun=11;HaplotypeScore=79.9830;InbreedingCoeff=0.7998;MQ=66.94;MQ0=6;MQRankSum=2.829;QD=15.48;ReadPosRankSum=-0.500;VQSLOD=4.7401;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:31:34.43:0,34,235	1/1:0,3:3:8.99:74,9,0	0/1:21,3:13:52.70:53,0,82	0/0:19,0:11:6.26:0,6,65	0/0:5,0:22:31.08:0,31,172	1/1:2,22:24:21.98:387,22,0	1/1:5,19:24:56.92:468,57,0	1/1:10,22:32:59.87:492,60,0	0/0:8,0:16:29.46:0,29,162	1/1:5,21:26:56.84:459,57,0	1/1:5,14:19:6.93:258,7,0	1/1:2,14:16:29.95:246,30,0	0/0:13,0:14:19.55:0,20,110	0/0:1,0:18:33.99:0,34,168	1/1:6,20:26:50.91:416,51,0	0/0:4,0:15:22.36:0,22,113	0/0:2,0:22:36.44:0,36,185	1/1:6,24:29:55.01:430,55,0	1/1:4,20:24:23.97:389,24,0	1/1:3,24:27:68.90:566,69,0	1/1:3,23:26:50.93:419,51,0	0/0:4,0:18:26.20:0,26,134	1/1:6,14:20:10.02:288,10,0	1/1:2,17:19:50.92:415,51,0	1/1:10,24:34:47.50:394,48,0	1/1:4,21:23:62.86:508,63,0	1/1:1,21:22:44.95:370,45,0	0/1:9,14:23:18.97:275,0,19
chr10	37828710	.	AAGTC	A	1487.67	PASS	AB=0.984;AC=17;AF=0.304;AN=56;BaseQRankSum=-1.190;DP=667;FS=0.453;HRun=0;HaplotypeScore=167.1963;InbreedingCoeff=0.0331;MQ=70.71;MQ0=0;MQRankSum=-2.495;QD=4.38;ReadPosRankSum=0.441;VQSLOD=2.6205;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:34,0:34:74.87:231,0,75	0/1:10,0:10:18.97:19,0,30	0/0:18,0:16:17.18:0,17,239	0/0:40,0:25:16.87:0,17,342	0/0:28,0:28:69.16:0,69,1417	0/1:23,0:23:88.61:89,0,140	1/1:21,0:21:3.44:21,3,0	1/1:27,0:25:41.91:402,42,0	0/0:18,0:18:42.13:0,42,943	0/1:26,0:26:99:344,0,149	0/1:17,1:18:49.94:76,0,50	0/0:28,0:28:56.78:0,57,1191	0/0:13,0:12:30.08:0,30,656	0/0:25,0:25:66.18:0,66,1355	0/1:27,0:27:5.55:6,0,260	0/0:26,0:26:60.19:0,60,1419	0/0:22,0:22:60.17:0,60,1334	0/1:18,0:18:39.20:56,0,39	0/1:29,0:29:99:215,0,220	0/1:17,1:18:7.66:8,0,102	1/1:31,0:31:7.35:53,7,0	0/0:20,0:20:48.09:0,48,1002	0/0:18,0:18:51.16:0,51,1181	0/0:34,0:33:93.18:0,93,1789	0/1:24,2:25:49.87:84,0,50	0/0:25,0:25:48.38:0,48,1037	0/1:32,0:31:53.05:53,0,276	0/0:11,0:11:30.10:0,30,580
chr10	37828719	.	A	AGTCT	5498.55	PASS	AB=0.888;AC=28;AF=0.500;AN=56;BaseQRankSum=5.503;DP=712;FS=0.821;HRun=0;HaplotypeScore=176.6253;InbreedingCoeff=0.6214;MQ=69.27;MQ0=1;MQRankSum=-11.154;QD=13.06;ReadPosRankSum=-5.068;VQSLOD=3.5559;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:81.16:0,81,847	1/1:3,0:9:3:51,3,0	0/0:24,0:19:27.63:0,28,312	0/1:53,0:33:12.01:12,0,416	0/0:26,0:26:72.21:0,72,1239	1/1:6,18:24:18.52:433,19,0	1/1:3,20:23:2.48:71,2,0	1/1:36,0:34:58.65:544,59,0	0/0:16,0:16:42.14:0,42,783	1/1:6,21:28:47.99:841,48,0	1/1:5,14:19:14:358,14,0	0/0:28,0:28:68.42:0,68,1110	0/0:13,0:12:33.10:0,33,579	0/0:24,0:24:69.21:0,69,1208	1/1:3,22:26:29.47:713,29,0	0/0:26,0:26:60:0,60,1130	0/0:23,0:23:63.17:0,63,1069	1/1:5,13:18:12.51:286,13,0	1/1:27,4:30:16.90:509,17,0	1/1:4,15:19:15.52:361,16,0	1/1:11,21:34:0.46:1,0,0	0/0:20,0:20:51.12:0,51,863	0/0:17,0:17:51.16:0,51,917	0/0:35,0:34:99:0,99,1612	1/1:9,14:22:7.19:147,7,0	0/1:29,0:29:99:229,0,471	0/1:9,25:35:19.12:749,0,19	0/1:12,0:12:66.63:195,0,67
chr10	37828723	.	A	AGTCTGTCT	7614.41	PASS	AB=1.000;AC=33;AF=0.589;AN=56;BaseQRankSum=-1.151;DP=724;FS=1.634;HRun=0;HaplotypeScore=221.7903;InbreedingCoeff=0.5563;MQ=66.43;MQ0=1;MQRankSum=-9.863;QD=15.51;ReadPosRankSum=-4.073;VQSLOD=3.5532;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:35,0:39:46.04:46,0,375	1/1:7,0:7:3.01:124,3,0	0/0:24,0:17:27.59:0,28,187	0/0:59,0:35:5.60:0,6,102	0/0:27,0:27:66.08:0,66,1061	1/1:24,0:24:21.06:293,21,0	1/1:21,0:21:5.60:64,6,0	1/1:37,0:35:68.83:675,69,0	0/0:15,0:15:38.96:0,39,575	1/1:29,0:29:67.67:718,68,0	1/1:23,0:23:27.04:317,27,0	0/1:26,0:26:99:116,0,499	0/0:14,0:13:33.07:0,33,662	0/0:23,0:23:50.87:0,51,966	1/1:28,0:28:35.88:439,36,0	0/0:25,0:25:60.13:0,60,1185	0/0:25,0:25:60.11:0,60,1110	1/1:19,0:19:18.02:237,18,0	1/1:37,0:36:34.20:707,34,0	1/1:18,0:18:15.05:228,15,0	1/1:31,0:31:5.99:50,6,0	0/0:19,0:19:44.94:0,45,734	0/1:20,0:20:97.97:98,0,381	0/1:34,0:33:99:176,0,478	1/1:22,0:21:15.01:156,15,0	1/1:2,28:33:82.37:1745,82,0	0/1:31,0:31:59.38:444,0,59	1/1:3,9:12:24.08:983,24,0
chr10	37829129	.	G	GTCTCTC	3653.89	PASS	AB=0.741;AC=25;AF=0.463;AN=54;BaseQRankSum=-0.621;DP=558;FS=0.000;HRun=0;HaplotypeScore=156.8811;InbreedingCoeff=0.7269;MQ=68.70;MQ0=13;MQRankSum=-4.076;QD=15.82;ReadPosRankSum=-2.976;VQSLOD=2.0875;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:50.97:0,51,822	0/1:3,5:8:0:0,0,0	0/0:41,0:24:50.63:0,51,871	0/0:55,0:42:81.15:0,81,1621	0/0:9,0:9:6.02:0,6,89	./.	0/1:12,21:33:6.73:27,0,7	1/1:24,0:23:41.10:833,41,0	0/0:23,0:23:45.15:0,45,857	1/1:10,0:10:29.99:558,30,0	1/1:6,3:9:0.47:1,0,0	0/0:23,0:23:26.74:0,27,387	0/0:19,0:19:38.80:0,39,704	0/0:18,0:18:30.08:0,30,491	1/1:21,0:21:3.01:91,3,0	0/0:24,0:24:51.13:0,51,888	0/0:27,0:26:57.19:0,57,1140	1/1:5,11:16:15.45:288,15,0	1/1:6,4:11:14.87:293,15,0	1/1:7,6:14:6.02:94,6,0	1/1:12,12:24:0.47:1,0,0	0/0:7,0:7:12.04:0,12,231	0/0:15,0:15:6.02:0,6,85	0/0:28,0:28:3.01:0,3,43	0/1:9,0:9:0:0,0,0	1/1:19,0:19:37.52:629,38,0	1/1:10,7:18:12.04:292,12,0	1/1:12,0:11:29.79:548,30,0
chr10	37829140	.	TCTCACACACACACACACACACA	T	2453.40	PASS	AB=1.000;AC=14;AF=0.250;AN=56;BaseQRankSum=8.090;DP=557;FS=5.249;HRun=0;HaplotypeScore=246.0104;InbreedingCoeff=0.2930;MQ=57.32;MQ0=15;MQRankSum=-5.777;QD=13.55;ReadPosRankSum=5.374;VQSLOD=1.8833;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:58.14:0,58,4163	0/0:7,0:7:3.31:0,3,279	0/0:34,0:17:8.95:0,9,375	0/0:46,0:33:87.91:0,88,1235	1/1:13,0:13:3.46:24,3,0	0/0:12,0:11:3.48:0,3,279	0/0:32,0:31:22.47:0,22,1666	0/0:22,0:21:54.06:0,54,1313	0/1:23,0:23:47.99:48,0,290	0/0:16,0:16:48.11:0,48,3408	0/1:7,0:7:0.02:0,0,0	1/1:1,22:23:26.48:1630,26,0	0/0:18,0:18:44.60:0,45,660	0/1:16,0:16:85.79:86,0,113	0/0:22,0:22:3.01:0,3,284	0/1:22,0:22:99:206,0,124	0/1:24,0:23:26.50:27,0,987	0/0:25,0:23:44.87:0,45,2916	0/0:10,0:10:20.75:0,21,685	0/0:14,0:14:13.95:0,14,597	0/0:26,0:25:9.46:0,9,563	0/1:9,0:8:34.44:34,0,60	1/1:1,15:16:6.02:369,6,0	1/1:2,26:28:3.01:184,3,0	0/0:9,0:9:6:0,6,297	0/0:18,0:18:47.94:0,48,1251	0/0:18,0:18:19.35:0,19,1635	0/0:11,0:10:30.06:0,30,692
chr10	37829142	.	TCACACACACACACACA	T	4665.87	PASS	AB=0.788;AC=18;AF=0.333;AN=54;BaseQRankSum=6.676;DP=566;FS=2.201;HRun=0;HaplotypeScore=202.3430;InbreedingCoeff=0.6112;MQ=54.71;MQ0=17;MQRankSum=-6.476;QD=24.18;ReadPosRankSum=5.253;VQSLOD=3.6990;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:45.15:0,45,2803	0/0:7,0:7:3.01:0,3,223	./.	0/0:44,0:31:3.01:0,3,41	1/1:7,5:13:6.02:218,6,0	0/0:14,0:13:9.03:0,9,649	0/0:35,0:34:25.02:0,25,1708	0/0:23,0:22:17.98:0,18,662	1/1:13,10:23:11.60:526,12,0	0/0:18,0:19:47.37:0,47,2710	0/0:8,0:8:2.99:0,3,215	1/1:22,0:23:26.91:1004,27,0	0/1:9,0:18:0.07:220,0,0	1/1:11,4:16:9.03:375,9,0	0/0:5,0:24:3.01:0,3,207	1/1:9,13:22:33.11:1449,33,0	0/1:21,1:22:99:275,0,208	0/0:23,0:21:35.79:0,36,2065	0/0:10,0:10:10.28:0,10,561	0/0:14,0:15:8.05:0,8,449	0/0:27,0:26:9.03:0,9,644	1/1:6,5:9:5.92:263,6,0	1/1:15,0:15:6.02:224,6,0	1/1:28,0:28:3.01:112,3,0	0/0:8,0:8:3.01:0,3,219	0/0:15,0:18:14.87:0,15,547	0/0:17,0:17:18.83:0,19,1250	0/0:9,0:10:11.84:0,12,166
chr10	37830572	.	TTG	T	254.29	PASS	AB=0.981;AC=14;AF=0.292;AN=48;BaseQRankSum=3.972;DP=519;FS=7.975;HRun=0;HaplotypeScore=128.3408;InbreedingCoeff=-0.1782;MQ=61.82;MQ0=22;MQRankSum=-0.906;QD=1.17;ReadPosRankSum=-0.923;VQSLOD=1.9369;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:3.47:0,3,26	1/1:10,0:9:2.52:10,3,0	./.	./.	0/1:12,0:10:0.06:0,0,0	0/0:13,0:12:9.05:0,9,127	0/1:28,0:26:43.41:43,0,70	0/0:38,0:37:7.46:0,7,99	0/1:13,0:13:15.02:32,0,15	0/1:17,0:15:28.22:28,0,87	1/1:8,0:9:2.92:17,3,0	0/0:18,0:17:6.02:0,6,77	0/0:12,1:13:11.97:0,12,111	0/0:14,0:14:4.05:0,4,142	0/0:15,0:15:3.01:0,3,37	0/1:20,0:20:21.79:22,0,91	0/1:26,1:23:89.80:90,0,120	0/1:15,0:14:44.54:45,0,107	0/1:26,0:25:31.82:50,0,32	./.	0/0:32,0:31:3.01:0,3,43	0/0:6,2:6:5.99:0,6,63	./.	0/0:26,0:26:1.25:0,1,3	0/0:20,0:17:2.89:0,3,42	0/1:16,2:15:20.53:21,0,88	0/1:17,1:17:26.51:27,0,74	0/0:11,0:11:9.90:0,10,110
chr10	37830611	.	TGC	T	1118.54	PASS	AB=0.836;AC=24;AF=0.500;AN=48;BaseQRankSum=-0.422;DP=343;FS=13.216;HRun=0;HaplotypeScore=99.4443;InbreedingCoeff=-0.0853;MQ=36.75;MQ0=51;MQRankSum=-0.158;QD=4.72;ReadPosRankSum=-2.266;VQSLOD=1.1606;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:17,2:19:2.99:23,3,0	1/1:4,1:4:2.34:28,2,0	./.	./.	1/1:9,0:6:5.94:43,6,0	0/1:9,1:8:13.19:13,0,86	0/1:14,4:14:50.59:111,0,51	1/1:8,1:9:2.88:33,3,0	1/1:9,2:7:6.02:88,6,0	0/1:16,3:16:27.60:74,0,28	1/1:9,3:11:3.01:42,3,0	0/0:19,2:17:8.52:0,9,43	0/0:6,0:6:5.48:0,5,41	0/0:13,0:11:10.58:0,11,103	0/0:2,4:5:2.69:0,3,14	0/1:14,2:14:16.11:153,0,16	0/1:25,6:21:31.17:257,0,31	0/1:9,3:8:64.17:126,0,64	0/1:5,6:9:7.08:163,0,7	./.	0/0:21,4:14:5.04:0,5,39	0/0:9,0:5:5.38:0,5,39	./.	1/1:18,2:16:8.82:69,9,0	0/0:8,3:8:2.85:0,3,28	0/1:22,0:18:12.83:13,0,34	0/1:3,6:9:21.33:21,0,54	0/1:4,0:3:7.58:8,0,57
chr10	37830617	.	CGTGCGTGCGTGCGTGCGTGCGTGCGTGTGTGTGTGTGTGTGTGTGTGT	C	1789.54	PASS	AB=1.000;AC=28;AF=0.583;AN=48;BaseQRankSum=1.276;DP=306;FS=0.889;HRun=0;HaplotypeScore=225.3755;InbreedingCoeff=0.3650;MQ=35.17;MQ0=53;MQRankSum=-1.125;QD=8.36;ReadPosRankSum=-3.620;VQSLOD=2.2308;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:13,0:13:0:0,0,0	1/1:4,0:4:8.95:78,9,0	./.	./.	0/0:8,0:5:2.92:0,3,219	0/1:7,0:6:0:0,0,0	1/1:18,0:14:11.94:115,12,0	1/1:5,0:5:5.98:80,6,0	0/0:9,0:5:8.59:0,9,384	1/1:5,13:15:40.35:536,40,0	1/1:5,6:10:2.99:23,3,0	0/1:21,0:17:99:103,0,346	0/1:5,0:5:12.56:13,0,162	0/0:14,0:11:8.99:0,9,384	0/1:5,0:4:0:0,0,0	0/0:12,0:10:19.31:0,19,1927	0/0:25,0:14:26.20:0,26,1640	1/1:11,0:7:13.92:160,14,0	1/1:8,0:6:14.95:158,15,0	./.	0/1:21,0:10:43.89:44,0,343	0/0:9,0:5:3.01:0,3,152	./.	0/1:18,0:14:0.03:0,0,0	1/1:11,0:8:3.01:50,3,0	1/1:6,16:18:28.66:452,29,0	1/1:9,0:8:8.95:93,9,0	0/1:7,0:3:33.89:34,0,162
chr10	37830619	.	TGCGTGCGTGCGTGCGTGCGTGC	T	1734.92	PASS	AB=1.000;AC=29;AF=0.659;AN=44;BaseQRankSum=0.378;DP=307;FS=0.000;HRun=0;HaplotypeScore=144.1603;InbreedingCoeff=0.3677;MQ=34.86;MQ0=53;MQRankSum=-3.224;QD=8.38;ReadPosRankSum=-3.005;VQSLOD=1.9138;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	1/1:4,0:4:8.95:78,9,0	./.	./.	0/0:8,0:5:2.56:0,3,14	./.	1/1:19,0:15:11.94:115,12,0	1/1:3,0:3:6.02:81,6,0	0/1:8,0:5:10.86:11,0,120	1/1:18,0:15:19.01:207,19,0	1/1:11,0:10:2.99:23,3,0	0/1:21,0:17:55.38:80,0,55	0/1:4,0:4:8.09:47,0,8	0/0:12,0:9:8.99:0,9,139	1/1:7,0:6:9.03:215,9,0	0/0:12,0:10:19.28:0,19,693	0/0:24,0:14:21.42:0,21,528	1/1:12,0:8:20.98:286,21,0	1/1:8,0:6:14.97:159,15,0	./.	0/1:21,0:10:43.41:43,0,67	0/0:9,0:5:3.01:0,3,48	./.	0/1:19,0:15:0:0,0,1	1/1:13,0:10:3.01:50,3,0	1/1:22,0:18:15.46:186,15,0	1/1:9,0:8:11.96:172,12,0	1/1:8,0:4:8.94:130,9,0
chr10	37830639	.	TGC	T	532.38	PASS	AB=1.000;AC=37;AF=0.881;AN=42;BaseQRankSum=-1.666;DP=255;FS=0.000;HRun=0;HaplotypeScore=94.2724;InbreedingCoeff=0.1147;MQ=36.92;MQ0=43;MQRankSum=1.724;QD=2.65;ReadPosRankSum=-2.536;VQSLOD=1.6610;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:7,1:8:2.99:23,3,0	./.	./.	./.	0/0:8,0:8:2.33:0,2,33	./.	1/1:13,2:12:4.21:45,4,0	1/1:3,0:3:2.97:20,3,0	1/1:8,1:5:8.09:42,8,0	1/1:15,0:13:0.47:1,0,0	./.	1/1:15,0:12:5.37:41,5,0	1/1:2,0:2:6:57,6,0	1/1:11,0:7:2.99:24,3,0	1/1:8,0:7:0.69:20,1,0	0/1:12,0:11:1.90:132,0,2	1/1:27,0:21:18.92:66,19,0	1/1:6,0:3:2.68:20,3,0	1/1:2,0:1:1.55:4,2,0	./.	0/0:21,0:12:0.89:0,1,2	1/1:6,0:4:3:25,3,0	./.	1/1:22,1:20:2.66:20,3,0	1/1:10,0:8:2.99:24,3,0	1/1:20,0:17:3.44:21,3,0	1/1:3,0:3:2.53:17,3,0	1/1:6,0:2:2.59:16,3,0
chr10	37830641	.	CGT	C	340.46	PASS	AB=0.700;AC=9;AF=0.237;AN=38;BaseQRankSum=-4.432;DP=255;FS=0.000;HRun=0;HaplotypeScore=92.5041;InbreedingCoeff=0.4090;MQ=37.59;MQ0=43;MQRankSum=2.960;QD=5.67;ReadPosRankSum=-0.099;VQSLOD=2.5042;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:7:0.47:0,0,1	./.	./.	./.	0/1:4,3:7:3.32:14,0,3	./.	0/0:15,0:12:3.56:0,4,20	0/0:4,0:4:8.91:0,9,60	1/1:7,3:6:5.91:48,6,0	0/0:15,0:13:2.91:0,3,18	./.	0/0:11,0:8:5.96:0,6,45	1/1:1,1:2:3.01:33,3,0	./.	0/0:8,0:7:8.82:0,9,59	1/1:10,2:11:14.35:112,14,0	1/1:14,15:23:23.64:251,24,0	0/0:6,0:3:2.99:0,3,23	0/0:2,0:1:2.92:0,3,17	./.	0/0:20,0:13:2.98:0,3,21	./.	./.	0/0:22,0:19:3.75:0,4,28	0/0:10,0:8:0.47:0,0,1	0/0:20,0:17:2.46:0,2,18	0/0:3,0:3:3.86:0,4,23	0/0:6,0:2:2.97:0,3,20
chr10	37830849	.	G	GT	555.48	PASS	AB=0.909;AC=3;AF=0.054;AN=56;BaseQRankSum=0.477;DP=509;FS=8.028;HRun=10;HaplotypeScore=94.5723;InbreedingCoeff=0.7086;MQ=80.86;MQ0=6;MQRankSum=-4.108;QD=14.62;ReadPosRankSum=-1.509;VQSLOD=3.0889;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:10,18:28:65.90:650,66,0	0/0:13,0:13:29.83:0,30,245	0/0:44,0:22:32.15:0,32,240	0/0:39,0:25:27.69:0,28,213	0/0:25,0:25:68.41:0,68,547	0/0:20,0:20:41:0,41,382	0/0:9,0:9:17.88:0,18,139	0/0:29,0:29:65.88:0,66,536	0/0:7,0:7:20.98:0,21,172	0/0:25,0:25:68.87:0,69,563	0/0:10,0:10:12.39:0,12,180	0/1:9,1:10:0.73:1,0,170	0/0:8,0:8:23.35:0,23,180	0/0:8,0:8:17.87:0,18,146	0/0:14,0:14:35.95:0,36,295	0/0:14,1:14:26.95:0,27,219	0/0:28,1:29:31.59:0,32,458	0/0:15,0:15:35.95:0,36,295	0/0:22,0:22:56.92:0,57,466	0/0:18,0:18:10.13:0,10,288	0/0:7,0:7:17.98:0,18,148	0/0:11,0:11:26.84:0,27,208	0/0:12,0:12:20.94:0,21,172	0/0:9,0:9:23.96:0,24,197	0/0:21,0:21:50.94:0,51,418	0/0:23,1:24:33.97:0,34,485	0/0:17,0:17:41.84:0,42,331	0/0:19,0:19:47.90:0,48,387
chr10	37830862	.	C	CT	10364.23	PASS	AB=0.842;AC=53;AF=0.946;AN=56;BaseQRankSum=-5.565;DP=526;FS=1.920;HRun=9;HaplotypeScore=64.4515;InbreedingCoeff=-0.0629;MQ=77.37;MQ0=6;MQRankSum=-0.368;QD=19.70;ReadPosRankSum=3.956;VQSLOD=5.3053;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,20:31:63.16:686,63,0	0/1:2,9:11:2.03:195,0,2	0/1:49,0:20:34.86:35,0,73	0/1:40,0:26:16.17:16,0,28	1/1:7,21:27:67.42:722,67,0	1/1:7,10:18:44.90:452,45,0	1/1:2,5:7:3.97:122,4,0	1/1:6,24:31:68.98:725,69,0	1/1:2,6:8:20.79:211,21,0	1/1:0,28:27:77.98:829,78,0	1/1:4,7:11:24.02:248,24,0	1/1:2,7:9:0.61:216,1,0	1/1:0,10:11:26.91:279,27,0	1/1:5,6:11:22.61:236,23,0	1/1:1,11:12:27.07:299,27,0	1/1:3,12:14:24.06:266,24,0	1/1:6,26:33:13.58:588,14,0	1/1:2,16:18:39.11:431,39,0	1/1:14,11:25:57.17:631,57,0	1/1:3,11:15:5.47:330,5,0	1/1:0,7:7:18.05:199,18,0	1/1:1,10:11:30.04:318,30,0	1/1:1,11:12:5.58:244,6,0	1/1:1,8:9:26.86:279,27,0	1/1:4,17:21:19.07:438,19,0	1/1:5,20:25:60.16:664,60,0	1/1:2,13:15:16.27:406,16,0	1/1:4,10:14:27.07:299,27,0
chr10	37832839	.	ACACCAT	A	13847.53	PASS	AB=0.652;AC=48;AF=0.857;AN=56;BaseQRankSum=-1.928;DP=640;FS=11.240;HRun=0;HaplotypeScore=166.9989;InbreedingCoeff=0.3164;MQ=55.01;MQ0=15;MQRankSum=0.698;QD=24.29;ReadPosRankSum=3.728;VQSLOD=4.0584;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:12,13:23:30.17:924,30,0	1/1:3,7:10:18.06:337,18,0	0/0:35,0:14:14.78:0,15,190	0/0:33,0:11:2.29:0,2,203	1/1:5,7:12:6.02:125,6,0	1/1:5,16:21:35.79:708,36,0	1/1:29,7:34:18.44:514,18,0	1/1:30,4:31:36.10:631,36,0	1/1:14,15:28:66.21:1296,66,0	1/1:11,7:15:39.13:791,39,0	1/1:4,7:11:9.03:135,9,0	1/1:19,7:26:54.19:1098,54,0	1/1:3,14:16:27.09:570,27,0	1/1:12,6:17:27.08:530,27,0	1/1:4,21:25:33.11:694,33,0	1/1:2,11:13:24.04:466,24,0	1/1:5,15:20:27.09:545,27,0	0/1:9,9:18:51.84:52,0,116	1/1:22,9:26:24.05:434,24,0	1/1:8,10:18:12.04:241,12,0	0/1:38,30:60:3.83:156,0,4	1/1:9,8:17:33.11:680,33,0	1/1:3,6:9:15.05:302,15,0	1/1:14,8:22:33.10:665,33,0	1/1:8,8:16:15.05:290,15,0	1/1:11,16:22:51.15:962,51,0	0/1:7,13:20:18.44:526,0,18	0/1:4,5:9:31.93:176,0,32
chr10	37832854	.	C	CCAT	6709.31	PASS	AB=0.997;AC=35;AF=0.625;AN=56;BaseQRankSum=-1.343;DP=681;FS=2.427;HRun=0;HaplotypeScore=178.1138;InbreedingCoeff=-0.1395;MQ=40.03;MQ0=49;MQRankSum=1.909;QD=11.30;ReadPosRankSum=5.536;VQSLOD=4.5793;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:25,2:24:4.85:653,5,0	1/1:10,0:9:16.55:208,17,0	0/0:36,0:9:18.35:0,18,239	0/0:34,0:6:15.02:0,15,234	0/1:15,0:14:40.76:41,0,85	1/1:21,0:21:25.45:341,25,0	0/1:29,0:27:4.34:170,0,4	0/1:48,1:29:99:579,0,253	0/1:31,1:30:93.97:293,0,94	1/1:20,1:16:24.48:382,24,0	1/1:11,0:10:8.39:80,8,0	1/1:27,0:27:50.01:662,50,0	0/1:16,0:15:0.50:1,0,51	0/1:12,0:11:32.84:121,0,33	0/1:32,0:28:13.31:453,0,13	0/0:16,0:15:3.99:0,4,133	0/1:21,0:21:71.31:71,0,110	0/1:17,0:16:20.81:21,0,176	0/1:26,0:13:13.92:302,0,14	0/1:17,0:15:17.51:125,0,18	1/1:88,0:73:8.95:75,9,0	0/1:18,0:18:65.55:309,0,66	1/1:9,0:8:14.48:154,14,0	1/1:27,0:27:20.96:419,21,0	1/1:12,0:11:14.86:201,15,0	0/1:33,0:24:47.42:657,0,47	0/1:15,0:15:22.10:349,0,22	0/1:9,0:8:20.63:43,0,21
chr10	37832884	.	C	CCAT	1158.59	PASS	AB=0.987;AC=15;AF=0.268;AN=56;BaseQRankSum=6.609;DP=680;FS=12.221;HRun=0;HaplotypeScore=198.3438;InbreedingCoeff=-0.2127;MQ=29.37;MQ0=71;MQRankSum=-0.094;QD=3.46;ReadPosRankSum=2.222;VQSLOD=1.1250;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:28:99:126,0,185	0/1:9,0:8:21.36:30,0,21	0/0:15,0:4:4.20:0,4,64	0/0:20,0:2:5.78:0,6,35	0/0:21,0:17:14.92:0,15,159	0/1:25,0:20:66.14:66,0,73	0/0:36,0:29:14.90:0,15,104	0/1:41,0:15:25.60:26,0,155	0/0:35,0:33:51.91:0,52,541	0/1:21,0:17:2.16:2,0,90	0/0:9,0:8:2.84:0,3,19	0/1:23,0:23:28.45:196,0,28	0/0:16,0:15:31.07:0,31,339	0/0:14,0:12:20.79:0,21,209	0/1:32,0:28:24.90:250,0,25	0/0:16,0:15:29.67:0,30,312	0/0:20,0:20:24.36:0,24,278	0/1:14,0:12:16:16,0,141	1/1:32,1:12:7.31:144,7,0	0/0:16,0:13:2.22:0,2,7	0/0:91,0:68:0.79:0,1,55	0/0:21,0:18:23.64:0,24,211	0/0:14,0:11:8.72:0,9,50	0/1:28,0:27:4.12:77,0,4	0/1:12,0:11:18.86:30,0,19	0/1:36,1:25:94.99:95,0,142	0/1:10,2:12:50.49:161,0,50	0/1:15,0:13:34.77:90,0,35
chr10	37832887	.	TCACCATCACCAC	T	6450.24	PASS	AB=0.986;AC=36;AF=0.643;AN=56;BaseQRankSum=1.829;DP=681;FS=1.856;HRun=0;HaplotypeScore=228.9582;InbreedingCoeff=-0.1161;MQ=28.74;MQ0=80;MQRankSum=-2.725;QD=11.48;ReadPosRankSum=-1.990;VQSLOD=3.7301;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:30,3:27:99:547,0,123	0/1:9,0:7:4.71:145,0,5	0/0:12,0:3:3.01:0,3,30	0/0:18,0:2:5.97:0,6,61	0/1:20,0:16:3.34:3,0,132	1/1:22,1:18:35.79:544,36,0	0/1:38,0:30:53.03:53,0,66	0/1:46,0:20:1.07:234,0,1	0/1:34,0:32:29.18:29,0,487	1/1:26,1:20:5.92:390,6,0	1/1:10,0:9:2.42:17,2,0	1/1:17,4:21:48.03:958,48,0	0/1:16,0:15:9.18:9,0,280	0/1:15,0:13:14.30:14,0,179	1/1:30,1:27:10.69:869,11,0	0/1:16,0:15:0.74:1,0,289	0/1:19,0:19:26.80:27,0,202	0/1:13,0:11:77.60:219,0,78	1/1:32,0:12:17.96:377,18,0	1/1:16,0:13:5.86:35,6,0	0/0:87,2:66:0.34:0,0,86	0/1:22,0:18:18.03:18,0,164	1/1:12,2:11:11.49:61,11,0	1/1:26,3:28:26.13:507,26,0	0/1:14,1:13:25.55:197,0,26	0/1:35,1:24:81.67:579,0,82	1/1:11,0:11:9.88:361,10,0	1/1:15,0:13:14.23:255,14,0
chr10	37832890	.	CCAT	C	2714.57	PASS	AB=0.927;AC=29;AF=0.518;AN=56;BaseQRankSum=2.596;DP=685;FS=1.741;HRun=0;HaplotypeScore=192.5005;InbreedingCoeff=-0.6037;MQ=28.50;MQ0=88;MQRankSum=-5.154;QD=4.75;ReadPosRankSum=0.612;VQSLOD=2.6764;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:32,4:29:99:213,0,200	0/1:7,2:6:36.43:59,0,36	0/0:11,0:2:3.01:0,3,30	0/0:15,0:2:5.97:0,6,58	0/1:20,0:16:12.35:12,0,62	1/1:20,3:18:13.99:258,14,0	0/1:40,0:31:44.07:53,0,44	0/1:47,0:22:63.96:64,0,93	0/1:33,0:32:99:106,0,240	0/1:27,1:19:31.20:178,0,31	1/1:9,1:9:2.88:18,3,0	0/1:18,4:22:99:258,0,104	0/1:16,0:15:42.52:43,0,146	0/1:16,1:15:45.95:46,0,85	0/1:19,9:24:18.20:410,0,18	0/1:16,0:15:68.93:69,0,133	0/1:19,0:18:57.16:57,0,91	0/1:10,2:10:36.61:85,0,37	0/1:25,2:9:5.19:141,0,5	1/1:13,4:14:5.86:35,6,0	0/0:80,8:65:1.80:0,2,64	0/1:23,1:20:39.95:40,0,92	1/1:14,0:11:5.50:42,6,0	0/1:24,5:28:17.23:173,0,17	0/1:18,1:15:19.68:104,0,20	0/1:36,4:24:99:242,0,123	0/1:8,3:11:71.68:124,0,72	0/1:14,0:12:39.59:40,0,52
chr10	37832905	.	CCACCACCATCACCAT	C	6831.65	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=-1.579;DP=775;FS=9.014;HRun=0;HaplotypeScore=277.6431;InbreedingCoeff=-0.5620;MQ=29.88;MQ0=101;MQRankSum=-0.383;QD=9.29;ReadPosRankSum=2.302;VQSLOD=2.1817;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:45,0:35:99:230,0,180	1/1:10,0:7:12.04:255,12,0	0/0:7,0:1:3.01:0,3,60	0/0:14,0:1:3.01:0,3,65	0/1:26,0:18:2.92:3,0,155	0/1:27,0:20:32.30:290,0,32	0/1:61,0:51:99:204,0,258	1/1:28,26:28:55.03:966,55,0	0/1:37,0:36:29.78:30,0,267	0/1:44,0:23:99:514,0,145	1/1:15,0:11:2.25:16,2,0	0/1:26,0:26:99:454,0,103	0/1:16,0:15:30.98:31,0,133	0/1:20,0:18:46.70:47,0,47	1/1:32,0:29:2.16:1163,2,0	0/1:15,0:14:35.07:35,0,198	0/1:18,0:17:26.54:27,0,102	0/1:15,0:13:92.88:309,0,93	0/1:29,0:13:2.99:319,0,3	0/0:19,0:16:4.19:0,4,21	0/1:79,0:55:10.25:10,0,127	0/1:22,0:19:52.95:53,0,216	0/1:15,0:11:16.58:54,0,17	0/1:36,0:35:74.42:197,0,74	0/1:21,0:16:84.90:85,0,161	0/1:43,0:21:99:594,0,104	0/1:14,0:14:83.38:507,0,83	0/1:15,0:13:8.20:439,0,8
chr10	37832911	.	CCATCACCAT	C	6535.27	PASS	AB=0.939;AC=33;AF=0.589;AN=56;BaseQRankSum=-1.598;DP=829;FS=10.638;HRun=0;HaplotypeScore=238.0712;InbreedingCoeff=-0.4739;MQ=31.55;MQ0=113;MQRankSum=0.654;QD=8.13;ReadPosRankSum=3.793;VQSLOD=2.3884;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:45,0:34:35.69:36,0,94	1/1:9,1:6:12.03:147,12,0	0/0:10,0:2:6.02:0,6,125	0/0:15,0:2:6.02:0,6,83	0/1:26,0:20:41.07:188,0,41	0/1:24,1:18:68.83:137,0,69	0/1:61,2:53:99:245,0,490	0/1:59,0:32:99:701,0,146	0/1:15,24:38:20.71:366,0,21	0/1:44,2:24:99:403,0,244	1/1:16,2:14:8.67:117,9,0	0/1:29,0:29:90.33:102,0,90	1/1:16,0:16:23.97:272,24,0	1/1:10,13:21:9.03:133,9,0	0/1:32,2:30:80.79:644,0,81	1/1:12,3:14:27.06:503,27,0	1/1:15,1:16:17.91:266,18,0	0/1:16,0:14:99:315,0,130	0/1:30,1:13:26.92:144,0,27	0/1:23,0:18:19.01:131,0,19	0/1:86,1:63:95.17:95,0,117	0/1:18,0:20:99:296,0,109	1/1:15,0:10:2.69:43,3,0	0/1:39,0:38:58.30:85,0,58	0/1:23,1:17:45.42:45,0,136	0/1:47,2:22:68.80:381,0,69	0/1:15,2:17:91.31:419,0,91	0/1:10,3:11:36.62:324,0,37
chr10	37832917	.	CCAT	C	3007.32	PASS	AB=0.973;AC=27;AF=0.482;AN=56;BaseQRankSum=0.584;DP=894;FS=33.786;HRun=0;HaplotypeScore=218.9306;InbreedingCoeff=-0.7969;MQ=33.01;MQ0=124;MQRankSum=2.626;QD=3.48;ReadPosRankSum=0.735;VQSLOD=1.2026;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:47,3:37:44.99:104,0,45	0/1:9,1:6:0.57:69,0,1	0/0:12,0:2:6.02:0,6,130	0/0:18,0:4:11.61:0,12,124	0/1:27,0:19:73.22:78,0,73	0/1:24,1:19:85.68:111,0,86	0/1:71,0:60:89.11:89,0,718	0/1:59,0:33:99:277,0,335	0/1:35,1:36:99:121,0,173	0/1:54,0:29:99:207,0,337	0/1:22,0:18:30.64:77,0,31	0/1:29,1:29:23.65:122,0,24	0/1:19,0:17:27.71:142,0,28	0/1:22,0:21:52.73:89,0,53	0/1:31,6:32:99:357,0,110	0/1:21,0:20:36.32:182,0,36	0/1:18,0:17:39.40:96,0,39	0/1:15,1:15:99:126,0,157	0/1:36,1:15:80.45:80,0,123	0/1:26,1:19:21.87:57,0,22	0/1:91,2:67:74.72:75,0,121	0/1:22,0:19:99:199,0,105	1/1:16,0:11:2.20:11,2,0	0/1:39,1:40:36.20:36,0,91	0/1:25,1:19:43.58:44,0,164	0/1:49,1:22:99:161,0,135	0/1:19,1:20:99:118,0,129	0/1:15,0:12:57.41:130,0,57
chr10	37832926	.	CCAT	C	2828.73	PASS	AB=0.930;AC=19;AF=0.339;AN=56;BaseQRankSum=6.399;DP=915;FS=15.364;HRun=0;HaplotypeScore=203.1093;InbreedingCoeff=-0.2395;MQ=35.26;MQ0=124;MQRankSum=-3.570;QD=5.05;ReadPosRankSum=6.460;VQSLOD=1.2250;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:29,19:37:15.75:813,16,0	0/0:9,0:6:5.75:0,6,64	0/0:14,0:2:6.02:0,6,117	0/0:21,0:4:12.04:0,12,206	0/1:23,0:14:56.93:57,0,129	0/0:29,1:24:17.22:0,17,410	0/0:76,1:64:83.46:0,83,1291	0/1:67,0:38:99:290,0,598	0/1:35,0:33:99:176,0,118	0/1:54,1:30:19.90:20,0,624	0/0:22,0:17:17.46:0,17,164	0/1:8,23:30:9.98:716,0,10	0/0:20,0:18:21.07:0,21,378	0/1:23,0:22:26.71:27,0,61	0/1:32,1:29:63.24:63,0,294	0/1:20,1:20:99:141,0,382	0/1:21,0:20:60.13:60,0,226	0/1:16,0:15:6.38:6,0,396	0/1:38,0:16:24.72:25,0,238	0/0:25,0:18:19.21:0,19,206	0/0:89,3:67:37.71:0,38,592	0/1:20,4:21:65.30:65,0,244	1/1:8,10:14:5.87:91,6,0	0/1:17,25:42:82.01:397,0,82	0/0:24,1:18:15.34:0,15,303	0/1:49,1:21:23.62:24,0,353	0/0:20,0:20:4.63:0,5,325	0/1:15,0:12:22.16:22,0,152
chr10	37833323	.	ATT	A	8259.34	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=7.879;DP=613;FS=0.362;HRun=14;HaplotypeScore=81.3760;InbreedingCoeff=0.9602;MQ=68.15;MQ0=6;MQRankSum=0.274;QD=19.67;ReadPosRankSum=4.312;VQSLOD=4.4728;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,25:31:50.94:611,51,0	1/1:2,10:14:23.48:190,23,0	0/0:21,0:18:32.40:0,32,349	0/0:18,0:11:17.63:0,18,175	0/0:22,0:22:51.14:0,51,680	1/1:6,18:25:59.50:523,60,0	1/1:1,14:17:44.53:385,45,0	1/1:10,16:27:41.82:435,42,0	0/0:18,0:19:50.59:0,51,642	1/1:6,18:24:54:499,54,0	1/1:2,14:17:38.61:392,39,0	1/1:1,19:20:36.02:333,36,0	0/0:16,0:18:43.01:0,43,572	0/0:15,0:17:45.13:0,45,587	1/1:0,16:16:42.05:389,42,0	0/0:21,1:22:26.39:0,26,646	0/0:37,0:37:59.65:0,60,1090	1/1:4,17:21:41.99:389,42,0	1/1:8,16:24:47.61:414,48,0	1/1:6,17:25:0.67:351,1,0	1/1:1,12:13:30.03:278,30,0	0/0:14,0:16:40.97:0,41,504	1/1:4,20:23:50.73:463,51,0	1/1:3,15:18:33:305,33,0	1/1:2,23:24:53.84:485,54,0	1/1:2,33:36:98.77:889,99,0	1/1:6,26:32:77.73:706,78,0	1/1:1,8:9:24.01:222,24,0
chr10	37833946	.	G	GT	19709.67	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-1.299;DP=510;FS=0.000;HRun=0;HaplotypeScore=90.5972;InbreedingCoeff=0.9985;MQ=76.59;MQ0=0;MQRankSum=-7.306;QD=40.81;ReadPosRankSum=6.045;VQSLOD=4.8372;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,23:24:63.21:947,63,0	1/1:0,8:8:24.08:361,24,0	0/0:16,0:16:35.96:0,36,423	0/0:11,0:11:30.04:0,30,361	1/1:0,21:21:63.21:941,63,0	1/1:0,14:14:42.14:628,42,0	1/1:0,25:25:57.19:856,57,0	1/1:0,19:19:57.14:807,57,0	1/1:1,19:20:60.20:887,60,0	1/1:0,16:16:48.16:698,48,0	1/1:0,19:19:54.18:807,54,0	1/1:1,19:20:57.19:839,57,0	1/1:0,20:19:54.05:810,54,0	1/1:1,19:20:51.17:773,51,0	1/1:0,16:15:42.14:631,42,0	1/1:1,15:16:39.11:565,39,0	1/1:0,26:24:69.23:1030,69,0	1/1:0,18:18:48.16:716,48,0	1/1:1,16:17:48.16:718,48,0	1/1:0,17:17:48.16:720,48,0	1/1:0,17:17:48.16:717,48,0	1/1:0,22:22:60.20:898,60,0	1/1:1,17:18:51.17:765,51,0	1/1:0,19:19:44.82:675,45,0	1/1:0,16:16:48.16:717,48,0	1/1:0,19:19:57.15:805,57,0	1/1:0,16:16:39.13:590,39,0	1/1:0,20:20:54.18:806,54,0
chr10	37834055	.	AGAGAGAGAGAGAGAGAGAGAGAGAGAGATT	A	827.98	PASS	AB=1.000;AC=20;AF=0.417;AN=48;BaseQRankSum=-2.230;DP=332;FS=57.220;HRun=0;HaplotypeScore=191.0667;InbreedingCoeff=0.0898;MQ=31.90;MQ0=22;MQRankSum=2.047;QD=4.10;ReadPosRankSum=-2.626;VQSLOD=0.6394;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:9:0.96:0,1,32	0/0:3,0:3:0:0,0,0	./.	./.	0/1:16,0:16:0:0,0,0	0/0:12,0:9:2.56:0,3,30	0/0:10,0:7:0:0,0,0	0/0:8,0:7:9.76:0,10,79	0/0:16,0:16:9.19:0,9,259	0/1:16,0:16:24.26:198,0,24	0/1:19,0:17:0:0,0,0	0/0:17,0:15:9.18:0,9,136	0/1:21,0:19:20.11:20,0,77	0/1:15,0:13:13.18:13,0,29	1/1:11,0:10:0.77:2,1,0	0/0:16,0:15:7.25:0,7,67	0/1:14,0:8:17.96:48,0,18	0/0:5,0:5:13.52:0,14,150	0/1:12,0:11:75.14:97,0,75	./.	1/1:11,0:8:0.89:2,1,0	1/1:12,0:12:1.25:3,1,0	1/1:22,0:21:0.89:2,1,0	1/1:14,0:11:0.89:2,1,0	0/0:14,0:11:1.25:0,1,3	1/1:2,11:11:26.76:432,27,0	0/1:6,0:6:27.33:127,0,27	./.
chr10	37834059	.	AGAGAGAGAGAGAGAGAGAGAGAGATT	A	1354.13	PASS	AB=0.966;AC=27;AF=0.540;AN=50;BaseQRankSum=-1.501;DP=359;FS=43.872;HRun=0;HaplotypeScore=185.1970;InbreedingCoeff=0.0514;MQ=31.28;MQ0=29;MQRankSum=2.066;QD=5.67;ReadPosRankSum=-2.247;VQSLOD=0.8807;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:9:1:0,1,18	0/0:3,0:3:0:0,0,0	./.	./.	1/1:16,0:16:2.38:11,2,0	0/0:12,0:9:1.03:0,1,5	0/0:10,0:7:0:0,0,0	0/0:11,0:9:6.30:0,6,24	0/1:16,0:16:8.57:9,0,171	1/1:9,8:17:18.41:339,18,0	0/0:8,11:17:0:0,0,0	0/1:18,0:16:26.79:27,0,50	0/1:21,0:19:29:82,0,29	1/1:15,0:13:4.33:53,4,0	1/1:11,0:10:0.77:2,1,0	0/0:15,0:14:7.77:0,8,67	0/1:13,0:7:12.78:50,0,13	0/1:6,0:6:27.71:28,0,40	0/1:9,4:11:25.64:256,0,26	1/1:12,0:11:6.82:55,7,0	1/1:12,0:9:0.89:2,1,0	1/1:12,0:12:0.89:2,1,0	1/1:15,8:22:1.77:4,2,0	1/1:13,0:10:1.36:3,1,0	0/0:15,0:12:1.25:0,1,3	1/1:14,0:12:29.95:454,30,0	0/1:7,0:7:25.31:103,0,25	./.
chr10	37834073	.	A	ATT	209.93	PASS	AB=0.947;AC=18;AF=0.333;AN=54;BaseQRankSum=1.549;DP=434;FS=5.899;HRun=0;HaplotypeScore=135.3547;InbreedingCoeff=-0.0531;MQ=41.60;MQ0=52;MQRankSum=-1.982;QD=0.96;ReadPosRankSum=-0.369;VQSLOD=2.2693;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:5.99:0,6,51	0/0:2,0:2:0:0,0,0	0/1:35,0:10:5.52:6,0,11	0/0:53,0:5:3.43:0,3,10	0/0:14,1:16:1.11:0,1,42	0/0:16,0:12:3.01:0,3,31	1/1:12,1:10:0.47:1,0,0	0/0:13,0:9:17.51:0,18,187	0/0:15,1:17:10.04:0,10,127	0/1:14,1:15:69.53:70,0,214	1/1:18,0:17:1.22:3,1,0	0/0:17,0:16:23.92:0,24,315	0/1:16,0:13:19.61:20,0,107	0/0:16,1:16:2.50:0,2,57	0/1:16,0:15:0:0,0,0	0/1:10,4:13:29.18:44,0,29	0/1:11,1:7:37.91:44,0,38	0/0:7,0:7:17.54:0,18,199	0/1:15,0:10:10.25:10,0,218	0/0:13,0:12:2.98:0,3,37	1/1:14,0:11:0.47:1,0,0	0/1:11,0:11:0:0,0,0	1/1:15,0:14:0.24:1,0,0	0/0:11,1:10:5.98:0,6,92	0/0:17,0:14:2.90:0,3,47	0/1:14,0:12:40.05:40,0,116	0/1:7,1:8:28.24:88,0,28	./.
chr10	37834083	.	ATT	A	2612.61	PASS	AB=0.809;AC=38;AF=0.679;AN=56;BaseQRankSum=-2.503;DP=439;FS=1.073;HRun=2;HaplotypeScore=102.4272;InbreedingCoeff=0.1343;MQ=47.71;MQ0=56;MQRankSum=2.160;QD=9.50;ReadPosRankSum=3.590;VQSLOD=0.8122;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,6:8:5.62:44,6,0	1/1:1,0:1:3.01:46,3,0	0/0:48,0:13:9.01:0,9,160	0/0:78,1:9:0.57:0,1,27	1/1:13,1:14:2.88:46,3,0	1/1:5,10:11:1.95:29,2,0	0/0:5,11:13:0.47:0,0,1	1/1:6,15:15:6.99:405,7,0	1/1:11,3:14:5.58:73,6,0	0/1:12,0:12:27.85:310,0,28	0/1:15,2:15:0:0,0,0	1/1:10,7:16:23.22:348,23,0	1/1:8,4:9:11.47:141,11,0	1/1:15,0:13:3.44:36,3,0	0/1:2,9:10:0.03:0,0,0	1/1:8,2:9:2.75:26,3,0	0/1:12,0:6:6:31,0,6	0/1:3,2:5:23.44:128,0,23	0/1:11,2:8:5.55:209,0,6	1/1:2,12:13:4.57:70,5,0	0/0:2,13:13:0:0,0,0	0/0:5,1:6:0.47:0,0,1	0/1:9,1:9:0.21:0,0,0	1/1:8,3:10:8.61:137,9,0	1/1:7,9:13:4.51:90,5,0	1/1:13,1:12:30.10:429,30,0	0/1:1,7:8:15.11:48,0,15	1/1:5,0:2:6.02:91,6,0
chr10	37834085	.	TGAGAGAGA	T	1332.27	PASS	AB=0.978;AC=33;AF=0.589;AN=56;BaseQRankSum=1.927;DP=459;FS=22.926;HRun=0;HaplotypeScore=125.6179;InbreedingCoeff=0.2817;MQ=47.43;MQ0=59;MQRankSum=-4.086;QD=4.34;ReadPosRankSum=1.883;VQSLOD=0.8039;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:9,0:9:14.25:14,0,26	1/1:1,0:1:1.25:3,1,0	0/1:50,0:13:10.67:11,0,134	0/0:81,0:9:14.21:0,14,109	1/1:6,8:14:18.61:173,19,0	0/1:15,0:11:0:0,0,0	0/0:17,0:14:3.01:0,3,46	0/0:21,0:15:2.31:0,2,52	0/1:12,4:16:2.19:186,0,2	0/1:12,0:12:9.74:78,0,10	1/1:17,0:15:1.25:3,1,0	0/1:17,0:16:0.20:0,0,1	1/1:10,2:9:15.06:211,15,0	1/1:11,5:14:23.95:284,24,0	1/1:11,0:10:0.03:1,0,0	1/1:11,2:11:19.14:228,19,0	1/1:10,2:6:6.01:99,6,0	0/0:5,0:5:5.14:0,5,70	1/1:14,0:8:2.51:61,3,0	0/1:14,0:13:0:0,0,0	1/1:16,0:14:0.47:1,0,0	1/1:5,2:7:3.48:53,3,0	0/1:10,0:9:0:1,0,0	0/0:12,0:11:2.67:0,3,47	1/1:16,0:13:0.17:2,0,0	0/1:15,0:13:39.07:66,0,39	0/0:8,0:8:5.96:0,6,45	0/0:8,0:6:12.98:0,13,184
chr10	37834093	.	A	ATT	1203.18	PASS	AB=0.932;AC=13;AF=0.241;AN=54;BaseQRankSum=4.179;DP=496;FS=4.148;HRun=0;HaplotypeScore=112.2679;InbreedingCoeff=0.3859;MQ=48.15;MQ0=65;MQRankSum=-3.626;QD=10.28;ReadPosRankSum=-3.888;VQSLOD=2.5923;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:8:5.80:0,6,41	0/0:1,0:1:3.01:0,3,42	0/0:60,0:14:8.11:0,8,140	0/0:95,0:9:5.53:0,6,91	1/1:14,0:14:24.49:214,24,0	./.	0/0:19,0:16:8.64:0,9,112	0/0:24,0:18:47.89:0,48,511	0/1:18,2:21:6.12:324,0,6	0/0:12,0:12:23.27:0,23,289	1/1:15,0:14:1.25:3,1,0	0/0:13,0:13:22.28:0,22,341	0/1:12,0:9:18.22:170,0,18	0/1:16,0:15:0.62:326,0,1	1/1:11,0:10:1.25:3,1,0	0/1:12,2:12:3.48:198,0,3	0/1:9,1:6:3.89:54,0,4	0/0:7,0:7:17.89:0,18,224	0/0:14,0:9:11.63:0,12,215	0/0:14,0:13:9.03:0,9,119	0/0:18,0:17:8.56:0,9,138	1/1:4,0:4:3.01:52,3,0	0/0:11,0:10:5.44:0,5,92	0/0:15,0:14:21.55:0,22,300	0/0:17,0:15:12.90:0,13,228	0/0:16,0:15:29.40:0,29,449	0/0:11,0:11:17.61:0,18,196	0/0:9,0:6:18.06:0,18,274
chr10	37834096	.	GAGAGAGAT	G	808.29	PASS	AB=0.979;AC=13;AF=0.232;AN=56;BaseQRankSum=4.430;DP=511;FS=0.000;HRun=0;HaplotypeScore=128.5204;InbreedingCoeff=-0.0484;MQ=48.73;MQ0=64;MQRankSum=-3.986;QD=4.00;ReadPosRankSum=0.730;VQSLOD=2.1798;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:10,0:10:15.29:15,0,33	0/0:2,0:2:5.90:0,6,40	0/1:64,0:14:13.34:13,0,123	0/0:102,0:10:17.15:0,17,138	0/1:14,1:15:39.29:112,0,39	0/1:14,0:11:5.86:6,0,45	0/0:18,0:15:9.03:0,9,186	0/0:28,0:22:45.52:0,46,672	0/1:19,2:21:43.25:181,0,43	0/1:13,0:13:36.61:37,0,155	0/0:16,0:15:8.87:0,9,61	0/0:11,0:11:29.63:0,30,254	0/1:10,1:8:0.13:192,0,0	1/1:13,0:13:22.47:189,22,0	0/0:11,0:10:5.97:0,6,47	0/1:15,0:13:23.46:129,0,23	0/1:8,0:5:5.94:52,0,6	0/0:7,0:7:17.90:0,18,221	0/1:12,0:8:17.71:18,0,210	0/0:15,0:14:17.88:0,18,177	0/0:19,0:18:11.94:0,12,237	0/1:6,0:6:18.34:18,0,43	0/0:10,0:10:5.52:0,6,142	0/0:14,0:13:20.53:0,21,306	0/0:17,0:15:29.20:0,29,354	0/0:16,0:15:1.09:0,1,295	0/0:13,0:13:21.20:0,21,256	0/0:10,0:7:21.02:0,21,350
chr10	37834117	.	T	TGA	3145.70	PASS	AB=0.894;AC=15;AF=0.268;AN=56;BaseQRankSum=1.854;DP=542;FS=0.484;HRun=0;HaplotypeScore=106.9247;InbreedingCoeff=0.7118;MQ=61.94;MQ0=27;MQRankSum=-5.703;QD=13.05;ReadPosRankSum=0.296;VQSLOD=3.5333;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:2,0:11:8.48:0,8,34	0/0:4,0:4:9.03:0,9,114	0/1:46,0:15:13.15:13,0,39	0/1:82,0:27:8.24:8,0,157	1/1:2,18:20:47.98:745,48,0	0/0:16,0:15:29.93:0,30,350	0/0:20,0:19:24.55:0,25,303	0/0:35,0:31:72.23:0,72,906	0/1:10,8:18:25.97:384,0,26	0/0:16,0:16:42.13:0,42,524	0/0:17,0:17:30.04:0,30,341	0/0:11,0:11:27.04:0,27,323	1/1:6,9:14:30.10:498,30,0	1/1:2,12:14:37.37:600,37,0	0/0:18,0:18:27.04:0,27,317	1/1:5,12:16:23.87:470,24,0	1/1:4,4:7:15.02:221,15,0	0/0:10,0:10:30.04:0,30,346	0/0:21,0:18:36.11:0,36,452	0/0:17,0:17:42.06:0,42,495	0/0:24,0:24:24.05:0,24,289	1/1:1,10:11:24.08:397,24,0	0/0:11,0:11:12.02:0,12,137	0/0:14,0:14:32.92:0,33,400	0/0:10,0:10:24.03:0,24,284	0/0:24,0:24:54.12:0,54,644	0/0:10,0:11:23.89:0,24,258	0/0:11,0:10:30.10:0,30,378
chr10	37836902	.	TA	T	1018.83	PASS	AC=12;AF=0.240;AN=50;BaseQRankSum=-7.134;DP=192;FS=0.748;HRun=1;HaplotypeScore=48.6643;InbreedingCoeff=0.6274;MQ=88.24;MQ0=1;MQRankSum=0.841;QD=27.54;ReadPosRankSum=1.716;VQSLOD=3.4668;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:26.79:0,27,238	./.	0/0:9,0:8:11.47:0,11,64	0/0:16,0:11:11.55:0,12,105	1/1:0,5:4:9.03:120,9,0	0/0:6,0:6:17.75:0,18,116	0/0:1,0:1:2.97:0,3,20	0/0:33,0:33:94.94:0,95,793	1/1:0,4:4:12.04:156,12,0	0/0:3,0:3:8.75:0,9,55	0/0:4,0:4:5.93:0,6,40	0/0:3,0:3:2.90:0,3,16	1/1:0,2:2:6.02:84,6,0	1/1:0,3:3:6.02:78,6,0	0/0:3,0:3:2.92:0,3,17	1/1:0,1:1:3.01:42,3,0	1/1:5,16:20:53.38:691,53,0	0/0:23,0:23:60.16:0,60,398	0/0:5,0:5:14.66:0,15,111	./.	0/0:2,0:2:3.01:0,3,32	./.	0/0:2,0:2:5.94:0,6,43	0/0:4,0:4:2.88:0,3,15	0/0:5,0:5:7.69:0,8,42	0/0:1,0:1:2.99:0,3,24	0/0:6,0:6:17.86:0,18,133	0/0:16,0:16:47.63:0,48,365
chr10	37836904	.	T	TA	1405.35	PASS	AB=0.854;AC=24;AF=0.480;AN=50;BaseQRankSum=3.577;DP=197;FS=15.106;HRun=1;HaplotypeScore=47.2975;InbreedingCoeff=0.1411;MQ=87.76;MQ0=1;MQRankSum=-1.645;QD=10.89;ReadPosRankSum=2.333;VQSLOD=0.0544;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:6,4:10:14.39:99,0,14	./.	0/0:10,0:9:1.71:0,2,38	0/0:15,0:11:11.28:0,11,137	0/1:5,0:4:0.92:1,0,36	1/1:1,5:6:17.89:137,18,0	1/1:1,1:2:2.94:19,3,0	0/1:20,11:31:30.29:304,0,30	0/1:4,0:4:12.96:13,0,33	1/1:1,2:3:2.68:41,3,0	1/1:2,2:4:6:52,6,0	0/0:3,0:3:2.80:0,3,13	0/0:2,0:2:5.97:0,6,44	0/1:4,0:4:2.88:3,0,15	0/0:2,0:2:2.50:0,2,9	0/0:1,0:1:2.99:0,3,23	0/0:25,0:23:43.08:0,43,393	1/1:6,17:23:29.24:412,29,0	0/1:5,1:6:17.46:30,0,17	./.	1/1:1,0:1:2.04:6,2,0	./.	0/0:2,0:2:5.59:0,6,34	0/0:4,0:4:2.80:0,3,13	0/1:3,1:6:10.16:17,0,10	1/1:0,0:1:3:25,3,0	0/1:3,3:6:11.43:86,0,11	1/1:7,9:17:23.51:310,24,0
chr10	37836905	.	T	TATA	2500.44	PASS	AB=0.777;AC=23;AF=0.460;AN=50;BaseQRankSum=-1.037;DP=197;FS=8.524;HRun=0;HaplotypeScore=48.8189;InbreedingCoeff=0.2536;MQ=86.07;MQ0=1;MQRankSum=-1.380;QD=18.80;ReadPosRankSum=1.130;VQSLOD=1.6806;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:8,0:12:36.55:158,0,37	./.	0/0:8,0:7:5.93:0,6,72	0/1:15,0:11:7.10:7,0,142	0/0:5,0:4:9.03:0,9,119	1/1:1,2:6:18.05:236,18,0	1/1:2,0:3:5.99:50,6,0	0/1:17,9:28:52.04:545,0,52	0/0:5,0:5:11.98:0,12,138	0/1:1,1:3:0.39:63,0,0	1/1:2,2:4:6.02:102,6,0	0/0:3,0:3:2.98:0,3,22	0/0:3,0:3:6.02:0,6,87	0/0:5,0:5:9.02:0,9,101	1/1:2,0:2:3:25,3,0	0/0:1,0:1:3.01:0,3,44	0/0:25,0:23:66.16:0,66,829	1/1:7,17:24:20.29:806,20,0	0/1:5,0:6:10.07:98,0,10	./.	1/1:1,0:1:3.01:31,3,0	./.	0/0:1,0:1:2.84:0,3,14	0/0:4,0:4:2.98:0,3,22	0/1:5,1:6:0.87:73,0,1	1/1:1,0:1:2.74:12,3,0	1/1:2,2:5:12.04:161,12,0	0/1:8,0:17:49.12:291,0,49
chr10	37837364	.	CGGT	C	1017.44	PASS	AB=0.972;AC=17;AF=0.327;AN=52;BaseQRankSum=-2.769;DP=352;FS=10.555;HRun=0;HaplotypeScore=61.6888;InbreedingCoeff=-0.0052;MQ=82.76;MQ0=0;MQRankSum=0.587;QD=5.50;ReadPosRankSum=3.196;VQSLOD=0.4815;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,21:30:23.54:366,24,0	0/1:6,0:6:10.87:21,0,11	0/0:10,0:10:2.17:0,2,171	0/0:18,0:19:2.30:0,2,181	0/0:4,0:4:5.99:0,6,50	0/1:15,0:16:19.84:70,0,20	0/0:16,0:16:1.36:0,1,4	0/1:9,1:10:4.49:78,0,4	0/0:16,0:16:29.99:0,30,399	0/1:12,0:12:4.38:105,0,4	./.	0/0:18,0:18:4.91:0,5,186	0/0:14,0:14:15:0,15,153	0/0:10,0:10:15.03:0,15,238	0/1:10,1:11:27.84:154,0,28	0/0:10,0:10:15:0,15,200	0/0:22,0:22:35.48:0,35,475	0/1:15,0:15:23.65:24,0,45	1/1:1,2:3:5.75:62,6,0	1/1:8,0:8:5.93:40,6,0	0/1:25,0:24:23.12:37,0,23	0/0:11,0:11:14.90:0,15,136	./.	0/1:17,0:17:48.42:48,0,70	0/1:10,0:10:6.93:45,0,7	0/1:10,0:10:7.39:28,0,7	0/1:11,0:12:56.08:92,0,56	0/0:7,0:7:5.83:0,6,34
chr10	37837365	.	GGT	G	1586.23	PASS	AB=0.990;AC=36;AF=0.692;AN=52;BaseQRankSum=-2.174;DP=305;FS=7.037;HRun=0;HaplotypeScore=50.7339;InbreedingCoeff=0.2574;MQ=84.87;MQ0=0;MQRankSum=-1.140;QD=6.42;ReadPosRankSum=-2.370;VQSLOD=1.1771;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:25:23.49:215,23,0	1/1:4,0:4:6.88:54,7,0	0/1:10,1:10:20.37:20,0,126	0/1:18,0:18:16.18:16,0,129	0/1:5,0:5:15.51:16,0,41	1/1:12,0:12:13.83:107,14,0	1/1:15,1:16:2.13:11,2,0	1/1:10,0:10:10.31:72,10,0	0/0:16,0:16:27.03:0,27,298	1/1:11,1:12:15.11:164,15,0	./.	0/1:13,0:13:8.11:8,0,52	0/0:9,0:9:15.25:0,15,127	0/0:9,0:9:15.02:0,15,185	1/1:12,1:13:22.26:224,22,0	0/1:10,0:10:30.27:30,0,151	0/0:19,0:19:23.80:0,24,358	1/1:13,1:14:16.63:130,17,0	1/1:2,0:2:5.75:39,6,0	1/1:7,0:7:5.93:40,6,0	1/1:14,2:15:14.47:197,14,0	0/1:10,0:10:11.52:12,0,89	./.	0/1:11,0:11:7.56:58,0,8	1/1:9,0:9:13.24:106,13,0	1/1:10,0:10:9.28:63,9,0	1/1:10,1:11:18.48:154,18,0	0/1:8,0:8:0.18:18,0,0
chr10	37838773	.	ATT	A	9582.05	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-6.816;DP=609;FS=3.354;HRun=15;HaplotypeScore=86.0138;InbreedingCoeff=0.7190;MQ=72.12;MQ0=4;MQRankSum=0.013;QD=16.49;ReadPosRankSum=3.488;VQSLOD=4.4579;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:10,28:44:44.44:651,44,0	1/1:3,7:10:13.50:152,14,0	0/0:17,0:16:3.64:0,4,174	0/0:11,0:10:4.28:0,4,115	1/1:7,21:27:56.76:495,57,0	1/1:6,12:19:38.38:314,38,0	1/1:3,15:20:35.52:347,36,0	1/1:7,22:34:59.19:467,59,0	1/1:7,23:32:50.54:479,51,0	1/1:6,11:19:26.46:264,26,0	1/1:5,22:28:6.54:378,7,0	1/1:3,9:13:26.70:223,27,0	1/1:1,9:11:15.05:176,15,0	1/1:3,13:16:29.95:264,30,0	1/1:4,24:28:68.92:608,69,0	1/1:1,19:20:53.98:476,54,0	1/1:5,24:33:32.32:467,32,0	1/1:5,19:24:20.64:366,21,0	1/1:6,9:15:26.83:238,27,0	1/1:3,31:34:80.22:757,80,0	1/1:7,11:18:26.66:223,27,0	1/1:2,5:7:8.85:79,9,0	1/1:1,11:14:20.25:222,20,0	1/1:2,15:19:14.47:265,14,0	1/1:0,16:18:23.71:300,24,0	1/1:7,15:24:48.94:397,49,0	1/1:5,24:29:55.17:499,55,0	1/1:1,20:21:53.99:476,54,0
chr10	37839508	.	TGTTTAGGA	T	15703.61	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=17.088;DP=595;FS=13.564;HRun=0;HaplotypeScore=162.1972;InbreedingCoeff=0.9871;MQ=74.12;MQ0=2;MQRankSum=-16.652;QD=56.90;ReadPosRankSum=-1.973;VQSLOD=3.8358;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,132,5521	1/1:0,8:8:18.06:508,18,0	0/0:13,0:13:33.09:0,33,1151	0/0:18,0:18:48.16:0,48,1926	0/0:32,0:32:90.30:0,90,3836	1/1:4,20:23:54.18:1488,54,0	1/1:2,19:21:45.15:1253,45,0	1/1:8,16:24:48.14:1227,48,0	0/0:20,0:20:60.21:0,60,2544	1/1:2,14:16:42.13:1051,42,0	1/1:1,10:11:18.02:351,18,0	0/0:24,0:24:72.22:0,72,2961	0/0:22,0:22:63.22:0,63,2721	0/0:17,0:17:48.15:0,48,1924	1/1:6,30:36:87.30:2459,87,0	0/0:17,0:17:51.18:0,51,2261	0/0:40,0:40:99:0,114,5033	1/1:5,18:22:45.11:1208,45,0	1/1:3,3:6:9.03:255,9,0	1/1:1,11:12:24.08:622,24,0	1/1:7,18:25:29.72:728,30,0	0/0:21,0:21:60.20:0,60,2516	0/0:24,0:24:69.22:0,69,2913	0/0:27,0:27:81.28:0,81,3419	1/1:1,15:16:27.09:761,27,0	1/1:0,21:21:57.20:1563,57,0	1/1:3,23:26:66.23:1807,66,0	1/1:0,7:7:15.05:424,15,0
chr10	37839858	.	GC	G	4363.31	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=11.457;DP=656;FS=3.713;HRun=5;HaplotypeScore=65.9717;InbreedingCoeff=0.9049;MQ=77.39;MQ0=0;MQRankSum=0.786;QD=25.82;ReadPosRankSum=1.862;VQSLOD=4.6223;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,117,1598	0/0:14,0:14:33.11:0,33,451	0/0:17,0:17:6.25:0,6,324	0/1:15,0:15:7.09:7,0,206	1/1:2,17:19:36.10:408,36,0	0/0:25,0:25:66.22:0,66,901	0/0:40,0:40:99:0,114,1527	0/0:22,0:22:48.13:0,48,614	1/1:0,30:30:69.20:783,69,0	0/0:20,0:20:57.18:0,57,763	0/0:16,0:16:42.12:0,42,550	0/0:21,0:21:63.19:0,63,844	1/1:0,22:22:63.18:715,63,0	1/1:2,20:22:57.16:647,57,0	0/0:31,0:31:90.29:0,90,1214	1/1:1,18:19:51.15:579,51,0	1/1:0,32:32:90.26:1021,90,0	0/0:16,0:16:48.16:0,48,657	0/0:20,0:20:57.15:0,57,757	0/0:30,0:30:69.21:0,69,912	0/0:25,0:25:69.22:0,69,929	1/1:1,9:10:18.05:204,18,0	0/0:22,0:22:56.91:0,57,763	0/0:37,0:37:99:0,108,1477	0/0:12,0:12:36.08:0,36,471	0/0:30,0:30:90.30:0,90,1228	0/0:31,0:31:84.28:0,84,1147	0/0:16,0:15:39.13:0,39,533
chr10	37840076	.	A	AG	6577.49	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-9.208;DP=587;FS=7.876;HRun=3;HaplotypeScore=114.7587;InbreedingCoeff=0.9189;MQ=83.65;MQ0=0;MQRankSum=-1.692;QD=37.16;ReadPosRankSum=2.003;VQSLOD=3.9561;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,129,1536	0/0:14,0:14:6.06:0,6,15	0/0:19,0:19:49.92:0,50,558	0/0:16,0:16:38.89:0,39,443	1/1:2,15:17:42.13:552,42,0	0/0:19,0:19:17.22:0,17,56	0/0:23,0:23:19.83:0,20,75	0/0:27,0:27:47.39:0,47,161	1/1:1,21:22:60.20:819,60,0	0/0:22,0:22:49.27:0,49,190	0/0:17,0:17:4.09:0,4,19	1/1:2,23:25:66.21:908,66,0	1/1:0,15:15:45.15:616,45,0	1/1:1,13:14:36.12:492,36,0	0/0:16,0:16:16.64:0,17,39	1/1:2,11:13:33.11:451,33,0	1/1:0,31:31:90.30:1233,90,0	0/0:23,0:23:23.36:0,23,58	0/0:20,0:20:43.16:0,43,141	0/0:20,0:20:5.20:0,5,22	0/0:57,0:57:50.60:0,51,144	1/1:0,5:5:15.05:205,15,0	1/1:0,12:12:33.11:462,33,0	1/1:3,20:23:60.20:839,60,0	0/0:22,0:22:24.92:0,25,61	0/0:15,0:15:33.91:0,34,125	0/0:15,0:15:6.26:0,6,18	0/0:20,0:20:10.27:0,10,23
chr10	37840080	.	C	CA	19219.26	PASS	AB=1.000;AC=45;AF=0.804;AN=56;BaseQRankSum=-10.711;DP=598;FS=29.895;HRun=0;HaplotypeScore=70.7530;InbreedingCoeff=0.8834;MQ=82.84;MQ0=0;MQRankSum=-4.995;QD=40.29;ReadPosRankSum=2.831;VQSLOD=2.8599;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,129,1781	1/1:0,12:12:33.11:528,33,0	0/0:19,0:19:54.18:0,54,736	0/0:15,0:15:41.54:0,42,486	1/1:17,0:17:39.91:563,40,0	1/1:0,18:18:54.18:863,54,0	1/1:2,23:25:63.21:1007,63,0	1/1:1,27:28:81.28:1294,81,0	1/1:23,0:23:60.20:808,60,0	1/1:1,22:23:66.21:1023,66,0	1/1:0,18:18:51.17:814,51,0	0/0:23,0:23:3.24:0,3,103	1/1:18,0:18:41.83:588,42,0	1/1:15,0:15:36.12:482,36,0	1/1:0,17:17:48.16:768,48,0	1/1:11,0:11:33.11:452,33,0	1/1:33,0:33:90.30:1217,90,0	1/1:1,23:24:60.20:959,60,0	1/1:0,21:21:63.17:958,63,0	1/1:1,21:22:54.18:863,54,0	1/1:1,56:57:99:2494,157,0	1/1:6,0:6:15.05:205,15,0	0/1:13,0:13:3.27:3,0,30	0/0:21,0:21:34.14:0,34,105	1/1:0,25:25:60.20:960,60,0	1/1:0,15:15:45.15:718,45,0	1/1:1,15:16:48.13:740,48,0	1/1:0,20:20:57.19:911,57,0
chr10	37841309	.	C	CTG	6612.85	PASS	AB=0.591;AC=13;AF=0.232;AN=56;BaseQRankSum=-13.794;DP=932;FS=9.675;HRun=0;HaplotypeScore=116.9311;InbreedingCoeff=0.9053;MQ=65.12;MQ0=10;MQRankSum=0.892;QD=27.33;ReadPosRankSum=8.095;VQSLOD=5.5200;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:44:99:0,105,1236	0/0:14,0:14:36.08:0,36,423	0/0:70,0:41:52.38:0,52,592	0/0:55,0:38:56.84:0,57,666	1/1:7,24:31:39.13:636,39,0	0/0:23,0:23:60.17:0,60,724	0/0:31,0:32:68.69:0,69,766	0/0:52,0:52:99:0,111,1276	1/1:5,30:35:69.24:1122,69,0	0/0:41,0:45:98.76:0,99,1148	0/0:23,0:24:59.99:0,60,690	0/0:21,0:21:60.19:0,60,738	1/1:7,22:30:23.34:891,23,0	1/1:7,22:29:11.27:697,11,0	0/0:29,0:31:65.87:0,66,765	1/1:8,34:42:16.93:1247,17,0	0/1:12,26:38:7.62:884,0,8	0/0:23,0:25:71.79:0,72,792	0/0:33,0:30:66:0,66,739	0/0:32,0:32:84.06:0,84,973	0/0:40,0:44:99:0,111,1270	1/1:6,28:35:38.56:1136,39,0	0/0:22,0:22:42.13:0,42,516	0/0:37,0:37:99:0,99,1215	0/0:17,0:18:50.98:0,51,592	0/0:23,0:23:60.19:0,60,738	0/0:28,0:29:56.93:0,57,644	0/0:14,0:15:29.91:0,30,332
chr10	37841845	.	ATGT	A	12078.93	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=8.533;DP=464;FS=0.000;HRun=0;HaplotypeScore=74.0043;InbreedingCoeff=0.9773;MQ=72.88;MQ0=1;MQRankSum=-4.660;QD=37.98;ReadPosRankSum=3.613;VQSLOD=5.3752;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,42:43:93.32:1534,93,0	1/1:1,3:4:6.02:100,6,0	0/0:18,0:17:45.15:0,45,940	0/0:20,0:20:43.18:0,43,981	0/0:14,0:14:42.14:0,42,933	1/1:1,14:14:30.10:500,30,0	1/1:2,20:22:45.15:749,45,0	1/1:3,31:34:93.31:1497,93,0	0/0:10,0:10:27.09:0,27,612	1/1:1,12:13:36.12:600,36,0	1/1:2,8:10:21.07:350,21,0	1/1:0,19:19:48.16:799,48,0	0/0:11,0:11:33.10:0,33,690	0/0:15,0:15:42.13:0,42,870	1/1:3,12:15:27.09:450,27,0	0/0:18,0:18:48.16:0,48,1087	0/0:30,0:30:87.30:0,87,1930	1/1:0,14:14:32.97:549,33,0	1/1:0,12:12:33.11:550,33,0	1/1:0,15:15:30.10:499,30,0	1/1:0,17:17:36.12:600,36,0	0/0:10,0:10:30.10:0,30,680	1/1:0,6:6:12.04:200,12,0	1/1:1,14:15:36.12:585,36,0	1/1:0,18:18:30.10:499,30,0	1/1:0,18:18:54.18:899,54,0	1/1:2,10:12:27.09:450,27,0	1/1:1,15:16:42.14:671,42,0
chr10	37842002	.	TTAAA	T	746.33	PASS	AC=24;AF=1.000;AN=24;DP=236;FS=0.000;HRun=0;HaplotypeScore=43.3783;InbreedingCoeff=-0.0500;MQ=58.20;MQ0=4;QD=6.43;VQSLOD=1.1416;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:9,0:13:6.01:56,6,0	./.	./.	./.	1/1:7,0:9:2.96:19,3,0	1/1:10,4:13:6.02:92,6,0	./.	./.	./.	1/1:6,1:7:3.01:46,3,0	1/1:7,2:9:6.02:92,6,0	./.	./.	./.	./.	./.	1/1:10,0:15:9.01:83,9,0	./.	1/1:8,1:8:3.01:46,3,0	./.	1/1:3,2:5:6.02:92,6,0	./.	./.	./.	1/1:6,3:9:9.03:138,9,0	1/1:5,0:6:2.22:7,2,0	1/1:7,1:8:3.01:36,3,0	1/1:8,0:12:12.01:112,12,0
chr10	37842292	.	A	AGT	312.56	PASS	AB=0.598;AC=2;AF=0.043;AN=46;BaseQRankSum=-3.398;DP=319;FS=5.441;HRun=0;HaplotypeScore=61.8784;InbreedingCoeff=-0.0531;MQ=40.13;MQ0=36;MQRankSum=-3.793;QD=28.41;ReadPosRankSum=-0.720;VQSLOD=4.1922;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:17:21.07:0,21,294	./.	./.	./.	0/0:8,0:7:18.06:0,18,250	0/0:19,0:15:24.08:0,24,336	0/0:5,0:2:3.01:0,3,42	0/0:28,0:14:35.97:0,36,418	0/0:11,0:11:27.09:0,27,378	0/0:15,0:13:36.12:0,36,504	0/0:8,0:8:18.06:0,18,252	0/1:1,8:8:17.87:351,0,18	0/0:10,0:10:12.02:0,12,150	0/0:12,0:10:24.08:0,24,333	0/0:12,0:12:21.07:0,21,294	0/0:9,0:9:21.07:0,21,294	0/0:28,0:19:24.06:0,24,317	0/0:29,0:21:33.11:0,33,461	0/0:20,0:17:45.15:0,45,630	0/0:6,0:5:15.05:0,15,210	./.	./.	0/1:1,1:2:35.95:48,0,36	0/0:6,0:3:6.02:0,6,84	0/0:3,0:3:9.03:0,9,126	0/0:12,0:12:33.11:0,33,459	0/0:12,0:10:24.08:0,24,335	0/0:21,0:17:33.11:0,33,462
chr10	37842321	.	TAA	T	1401.04	PASS	AB=0.976;AC=16;AF=0.308;AN=52;BaseQRankSum=-8.311;DP=387;FS=0.572;HRun=13;HaplotypeScore=75.7038;InbreedingCoeff=0.7503;MQ=54.14;MQ0=35;MQRankSum=3.813;QD=11.12;ReadPosRankSum=3.036;VQSLOD=2.3464;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:18:39.12:0,39,542	0/0:3,0:3:8.81:0,9,53	0/0:30,0:7:17.82:0,18,156	0/0:14,0:3:1.79:0,2,15	1/1:4,11:16:29.72:274,30,0	0/0:21,0:19:35.02:0,35,277	./.	0/0:31,0:26:48.68:0,49,263	1/1:2,8:10:17.97:175,18,0	0/0:15,0:14:31.02:0,31,176	0/0:14,0:13:22.89:0,23,141	0/0:5,0:5:9.03:0,9,123	1/1:0,10:12:26.78:244,27,0	1/1:5,6:10:20.70:185,21,0	0/0:15,0:15:29.03:0,29,199	1/1:2,4:6:12.02:115,12,0	1/1:6,25:25:51.05:494,51,0	0/1:19,1:16:2.15:2,0,116	0/0:21,0:17:39.38:0,39,231	0/0:11,0:10:25.67:0,26,145	./.	1/1:0,3:3:9.01:87,9,0	0/0:4,0:4:8.90:0,9,102	0/0:7,0:4:5.97:0,6,63	0/0:5,0:6:11.45:0,11,83	0/0:15,0:15:12.82:0,13,214	0/0:15,0:15:31.40:0,31,211	0/1:17,0:15:10.06:10,0,187
chr10	37842335	.	C	CA	4357.94	PASS	AB=0.938;AC=36;AF=0.667;AN=54;BaseQRankSum=-6.932;DP=412;FS=1.042;HRun=13;HaplotypeScore=63.8469;InbreedingCoeff=0.7889;MQ=58.92;MQ0=21;MQRankSum=-2.789;QD=16.20;ReadPosRankSum=0.008;VQSLOD=5.8247;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,13:17:35.31:371,35,0	1/1:5,1:6:17.69:155,18,0	0/0:49,0:17:7.53:0,8,189	0/1:19,0:4:1.60:4,0,2	0/0:18,0:18:47.96:0,48,408	1/1:16,1:16:13.68:237,14,0	./.	1/1:35,0:31:59.67:541,60,0	0/0:8,0:8:18:0,18,155	1/1:17,0:17:38.55:359,39,0	1/1:10,0:9:17.78:153,18,0	1/1:1,8:9:6.01:67,6,0	0/0:15,0:15:29.85:0,30,249	0/0:11,0:10:23.98:0,24,206	1/1:14,0:14:35.16:277,35,0	0/0:7,0:7:17.55:0,18,129	0/0:31,0:27:59.93:0,60,508	1/1:17,0:14:31.68:243,32,0	1/1:21,0:19:44.54:393,45,0	1/1:13,0:13:35.92:334,36,0	1/1:3,0:2:3.01:33,3,0	0/0:3,0:3:8.99:0,9,75	1/1:4,2:6:15.02:151,15,0	1/1:2,2:4:3.01:33,3,0	0/1:6,1:7:3.69:116,0,4	1/1:16,0:16:35.51:274,36,0	1/1:14,0:14:9.53:235,10,0	1/1:18,0:17:43.87:381,44,0
chr10	37842486	.	TAGTTCTGGTA	T	16410.65	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=12.478;DP=436;FS=0.000;HRun=0;HaplotypeScore=145.6678;InbreedingCoeff=0.9611;MQ=91.18;MQ0=0;MQRankSum=-13.999;QD=61.01;ReadPosRankSum=0.752;VQSLOD=4.7253;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,16:20:30.10:951,30,0	1/1:0,5:5:15.05:468,15,0	0/0:34,0:34:87.30:0,87,3583	0/0:14,0:14:20.22:0,20,1425	0/0:22,0:22:54.19:0,54,2746	1/1:0,15:15:42.14:1341,42,0	1/1:4,13:17:30.10:952,30,0	1/1:10,18:28:51.15:1349,51,0	0/0:12,0:12:33.11:0,33,1714	1/1:5,11:16:33.11:1021,33,0	1/1:3,13:16:36.12:1123,36,0	1/1:2,12:14:27.09:846,27,0	0/0:13,0:13:33.11:0,33,1706	0/0:13,0:13:39.13:0,39,1995	1/1:0,19:19:48.16:1501,48,0	0/0:18,0:18:54.19:0,54,2773	0/0:27,0:27:75.26:0,75,3826	1/1:2,6:8:9.03:284,9,0	1/1:4,10:14:30.10:838,30,0	1/1:2,13:15:33.11:1025,33,0	1/1:5,11:16:12.04:350,12,0	0/0:14,0:14:36.12:0,36,1865	1/1:1,11:12:27.09:855,27,0	1/1:2,10:12:14.79:466,15,0	1/1:0,5:5:15.05:460,15,0	1/1:5,13:18:39.13:1222,39,0	1/1:0,15:15:38.96:1227,39,0	1/1:0,3:2:6.02:129,6,0
chr10	37844188	.	CATTA	C	19053.52	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=13.583;DP=623;FS=1.909;HRun=0;HaplotypeScore=118.8761;InbreedingCoeff=0.9938;MQ=79.74;MQ0=1;MQRankSum=-7.150;QD=43.60;ReadPosRankSum=5.000;VQSLOD=5.5322;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,30:31:78.27:1435,78,0	1/1:0,6:6:18.06:328,18,0	0/0:23,0:23:57.19:0,57,1363	0/0:20,0:20:45.15:0,45,1087	0/0:33,0:33:99:0,99,2577	1/1:2,25:27:51.17:938,51,0	1/1:0,19:19:45.15:828,45,0	1/1:6,32:37:96.25:1594,96,0	0/0:23,0:23:69.24:0,69,1790	1/1:2,31:33:90.30:1621,90,0	1/1:2,23:25:48.16:883,48,0	1/1:2,15:17:39.13:718,39,0	0/0:12,0:12:36.12:0,36,940	0/0:12,0:12:36.12:0,36,950	1/1:3,16:19:36.12:662,36,0	0/0:12,0:12:36.11:0,36,867	0/0:34,0:34:93.32:0,93,2433	1/1:2,20:22:57.20:1049,57,0	1/1:2,17:19:51.14:869,51,0	1/1:1,24:25:63.22:1159,63,0	1/1:0,14:14:30.10:552,30,0	0/0:17,0:17:51.16:0,51,1293	1/1:3,23:25:54.19:994,54,0	1/1:0,24:24:60.21:1104,60,0	1/1:2,24:26:63.22:1159,63,0	1/1:0,29:28:84.28:1505,84,0	1/1:1,31:32:78.27:1435,78,0	1/1:0,5:5:12.04:221,12,0
chr10	37846010	.	TACCACCATCATGACCATCATC	T	18426.41	PASS	AB=0.750;AC=43;AF=0.768;AN=56;BaseQRankSum=12.263;DP=532;FS=0.440;HRun=0;HaplotypeScore=287.3662;InbreedingCoeff=0.8257;MQ=90.32;MQ0=0;MQRankSum=-12.707;QD=54.36;ReadPosRankSum=6.239;VQSLOD=3.2100;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:96.33:0,96,7719	1/1:7,4:11:12.04:677,12,0	0/0:43,0:41:96.29:0,96,4976	0/0:42,0:43:96.27:0,96,5217	1/1:5,7:12:15.05:598,15,0	1/1:8,9:17:24.08:1172,24,0	1/1:13,7:20:9.03:336,9,0	1/1:22,0:22:15.03:229,15,0	1/1:6,10:16:18.06:1020,18,0	1/1:6,7:13:21.07:1090,21,0	1/1:6,5:11:9.03:510,9,0	0/0:17,0:17:42.14:0,42,3364	1/1:8,11:19:21.07:1186,21,0	1/1:6,10:16:30.10:1615,30,0	1/1:6,14:20:33.11:1705,33,0	1/1:3,10:13:18.06:959,18,0	1/1:10,12:22:14.89:812,15,0	0/1:8,4:12:44.13:164,0,44	1/1:7,5:12:15.04:594,15,0	1/1:9,4:13:7.25:228,7,0	1/1:11,9:20:15.05:550,15,0	1/1:3,6:9:8.88:375,9,0	0/0:14,0:14:39.13:0,39,3205	0/0:34,0:34:84.28:0,84,7494	1/1:3,8:11:15.05:752,15,0	1/1:7,12:19:33.11:1647,33,0	1/1:4,13:17:17.78:1019,18,0	1/1:5,9:14:21.07:1190,21,0
chr10	37846354	.	G	GC	3619.83	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-12.634;DP=537;FS=3.956;HRun=4;HaplotypeScore=95.8016;InbreedingCoeff=0.9926;MQ=63.57;MQ0=5;MQRankSum=-0.554;QD=32.32;ReadPosRankSum=1.851;VQSLOD=4.0261;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:63.18:0,63,714	0/0:12,0:12:36.10:0,36,408	0/0:14,0:9:21.05:0,21,232	0/0:27,0:21:57.06:0,57,601	1/1:2,16:18:36.12:490,36,0	0/0:16,0:15:39.11:0,39,442	0/0:21,0:21:60.17:0,60,681	0/0:25,0:22:66.19:0,66,749	1/1:1,17:19:51.06:672,51,0	0/0:23,0:23:60.17:0,60,680	0/0:13,0:13:30.09:0,30,340	0/0:20,0:20:36.09:0,36,400	1/1:2,11:13:30.10:409,30,0	1/1:0,10:10:24.08:328,24,0	0/0:28,0:28:81.21:0,81,909	1/1:1,15:16:36.12:492,36,0	1/1:0,28:28:78.26:1065,78,0	0/0:15,0:14:29.21:0,29,339	0/0:23,0:20:57.16:0,57,646	0/0:16,0:16:42.03:0,42,458	0/0:28,0:27:75.20:0,75,840	1/1:3,5:8:12.04:163,12,0	0/0:10,0:10:27.08:0,27,306	0/0:33,0:33:93.27:0,93,1059	0/0:13,0:13:39.10:0,39,433	0/0:28,0:27:66.18:0,66,749	0/0:15,0:14:39.11:0,39,442	0/0:15,0:15:42.12:0,42,476
chr10	37846405	.	T	TTC	1385.74	PASS	AB=1.000;AC=37;AF=0.661;AN=56;BaseQRankSum=4.662;DP=522;FS=13.891;HRun=0;HaplotypeScore=129.9599;InbreedingCoeff=0.3695;MQ=61.89;MQ0=12;MQRankSum=-2.152;QD=3.40;ReadPosRankSum=-1.888;VQSLOD=1.5514;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:13,8:21:3.01:40,3,0	1/1:7,0:6:8.99:75,9,0	0/1:26,0:14:0.99:1,0,9	0/0:30,0:16:3.01:0,3,33	0/0:18,0:17:29.87:0,30,231	1/1:15,0:13:5.99:48,6,0	1/1:26,0:25:2.93:19,3,0	1/1:25,0:24:2.97:20,3,0	0/0:17,0:15:20.94:0,21,168	1/1:19,0:19:32.75:241,33,0	1/1:24,0:23:8.99:74,9,0	0/1:15,0:15:0:0,0,0	1/1:8,0:8:5.94:42,6,0	0/1:14,0:14:51.36:117,0,51	1/1:25,0:25:9.46:75,9,0	0/0:13,0:13:5.98:0,6,48	0/0:25,0:25:6.75:0,7,138	1/1:15,0:14:9.29:55,9,0	1/1:25,0:19:20.81:148,21,0	0/1:10,0:10:0:0,0,0	1/1:20,0:18:14.98:123,15,0	0/1:8,0:8:33.74:56,0,34	0/0:12,0:12:2.84:0,3,14	0/1:19,0:20:10.17:10,0,61	0/1:11,0:11:15.36:41,0,15	1/1:28,0:26:30.65:220,31,0	1/1:20,0:19:11.80:86,12,0	1/1:23,0:21:9.33:61,9,0
chr10	37846433	.	CTCTCTCTGTGTGTG	C	662.61	PASS	AB=0.956;AC=11;AF=0.196;AN=56;BaseQRankSum=-1.196;DP=437;FS=8.624;HRun=0;HaplotypeScore=148.4830;InbreedingCoeff=-0.1280;MQ=44.47;MQ0=19;MQRankSum=2.818;QD=3.99;ReadPosRankSum=-2.271;VQSLOD=1.8438;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:17:3.01:0,3,116	0/0:6,0:5:12.04:0,12,273	0/0:8,0:2:6.02:0,6,131	0/0:11,0:2:6.02:0,6,90	0/0:22,0:21:39.08:0,39,762	0/1:10,0:8:59.72:60,0,225	0/0:25,0:19:13.35:0,13,210	0/0:14,0:4:8.99:0,9,137	0/0:19,0:17:39.13:0,39,1402	0/0:20,0:19:45.09:0,45,1055	0/0:17,0:16:12.03:0,12,326	0/1:7,14:21:19.37:84,0,19	0/0:7,0:7:15:0,15,260	0/0:15,0:14:30.99:0,31,1140	0/1:17,0:17:48.87:49,0,520	0/0:17,0:17:36.10:0,36,747	0/0:21,0:21:19.51:0,20,1217	0/1:10,0:8:57.35:57,0,303	0/0:17,0:11:24.08:0,24,488	0/0:7,0:7:7.57:0,8,144	0/1:16,0:14:27.99:28,0,536	0/0:12,0:12:24.08:0,24,907	1/1:3,11:14:2.64:128,3,0	0/1:19,0:19:99:312,0,184	0/0:14,0:14:18.06:0,18,486	0/1:22,0:20:27.94:28,0,816	0/1:19,0:19:40.73:41,0,447	0/1:18,0:16:20.19:20,0,610
chr10	37846439	.	CTG	C	1170.51	PASS	AB=0.984;AC=42;AF=0.840;AN=50;BaseQRankSum=-2.190;DP=417;FS=15.355;HRun=0;HaplotypeScore=87.3311;InbreedingCoeff=0.0551;MQ=44.44;MQ0=19;MQRankSum=1.251;QD=3.24;ReadPosRankSum=-2.768;VQSLOD=0.4080;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:21:1.25:0,1,3	./.	./.	./.	1/1:19,1:19:11.86:95,12,0	1/1:9,0:7:5.87:34,6,0	1/1:20,1:16:2.28:15,2,0	0/0:16,0:5:2.96:0,3,19	1/1:16,1:15:14.86:116,15,0	1/1:20,0:19:8.62:45,9,0	0/1:14,0:15:9.87:12,0,10	1/1:20,0:20:2.82:16,3,0	1/1:7,0:7:5.94:42,6,0	0/1:15,0:14:14.62:15,0,15	1/1:17,2:19:4.13:84,4,0	0/1:15,0:15:1.21:127,0,1	1/1:20,0:20:23.85:185,24,0	1/1:8,1:8:2.12:30,2,0	1/1:18,0:11:2.88:15,3,0	1/1:7,0:6:2.99:24,3,0	0/1:14,0:12:6.37:33,0,6	1/1:14,0:14:11.90:87,12,0	1/1:14,0:14:2.84:14,3,0	1/1:10,0:17:5.82:37,6,0	1/1:15,0:14:11.71:70,12,0	1/1:23,0:21:20.33:118,20,0	1/1:18,0:18:5.58:37,6,0	1/1:12,2:11:3.60:29,4,0
chr10	37846889	.	TTTTCTTTC	T	6462.65	PASS	AB=0.827;AC=36;AF=0.750;AN=48;BaseQRankSum=-2.265;DP=500;FS=5.889;HRun=0;HaplotypeScore=140.1656;InbreedingCoeff=0.3907;MQ=57.31;MQ0=1;MQRankSum=-4.400;QD=16.66;ReadPosRankSum=-2.438;VQSLOD=2.8479;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	1/1:34,0:34:5.48:666,5,0	1/1:14,14:28:18.06:447,18,0	1/1:15,0:14:21.02:371,21,0	1/1:25,0:25:6.01:67,6,0	0/1:7,0:7:17.88:47,0,18	1/1:16,16:32:51.17:1113,51,0	1/1:7,7:14:14.96:275,15,0	0/0:5,0:7:11.96:0,12,96	1/1:11,0:11:2.91:70,3,0	1/1:4,0:4:6.02:92,6,0	1/1:14,2:16:15.05:362,15,0	1/1:24,0:24:15.39:529,15,0	0/1:18,0:18:21.33:71,0,21	1/1:9,5:14:3.01:56,3,0	1/1:19,4:21:18.06:440,18,0	1/1:8,14:22:27.09:626,27,0	1/1:15,6:21:6.02:147,6,0	1/1:20,0:20:4.02:321,4,0	0/0:14,0:16:29.94:0,30,263	0/0:16,0:17:23.84:0,24,205	0/1:7,10:17:33.98:426,0,34	0/1:12,0:23:35.67:36,0,302	1/1:12,8:20:11.62:298,12,0	0/0:19,0:26:45.03:0,45,596
chr10	37846935	.	TTCTC	T	2925.27	PASS	AB=1.000;AC=27;AF=0.482;AN=56;BaseQRankSum=12.344;DP=475;FS=34.672;HRun=0;HaplotypeScore=119.3316;InbreedingCoeff=0.0702;MQ=53.87;MQ0=15;MQRankSum=-3.400;QD=8.73;ReadPosRankSum=0.510;VQSLOD=1.3755;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:50.28:0,50,338	0/0:5,0:5:11.98:0,12,98	0/0:25,0:9:19.05:0,19,158	0/0:14,0:3:8.98:0,9,82	1/1:32,2:33:56.58:632,57,0	0/1:21,0:21:29.08:29,0,100	0/1:13,0:12:13.14:13,0,125	0/0:22,0:17:44.89:0,45,372	1/1:6,1:7:12.86:115,13,0	0/1:26,0:26:30.09:30,0,187	0/1:14,0:14:3.21:3,0,132	0/1:7,0:7:6.09:95,0,6	1/1:7,0:7:17.91:152,18,0	1/1:10,0:10:25.26:185,25,0	0/0:18,0:18:1.55:0,2,209	1/1:20,0:20:59.47:532,59,0	1/1:11,0:12:29.66:234,30,0	0/0:15,0:15:29.37:0,29,209	0/1:22,0:20:3.46:3,0,270	0/1:23,0:23:43.03:43,0,137	0/0:13,0:13:5.41:0,5,126	1/1:15,1:16:47.83:446,48,0	0/1:19,0:19:99:172,0,120	0/1:18,0:18:71.26:71,0,185	0/1:16,0:16:27.65:28,0,140	0/1:20,0:18:99:167,0,108	0/1:12,0:12:36.46:36,0,69	0/1:18,0:18:99:122,0,308
chr10	37846944	.	C	CTT	1890.93	PASS	AB=0.789;AC=19;AF=0.339;AN=56;BaseQRankSum=6.314;DP=498;FS=1.555;HRun=11;HaplotypeScore=115.6629;InbreedingCoeff=0.9033;MQ=55.00;MQ0=11;MQRankSum=-3.121;QD=12.52;ReadPosRankSum=-0.129;VQSLOD=2.1218;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:36:0,36,349	0/0:5,0:5:12:0,12,116	0/0:27,0:11:23.19:0,23,190	0/0:17,0:4:11.99:0,12,106	1/1:28,7:34:21.63:459,22,0	0/0:24,0:25:41.72:0,42,387	0/0:15,0:15:29.93:0,30,284	0/0:24,0:22:35.62:0,36,330	1/1:4,1:6:8.51:88,9,0	0/0:26,0:26:41.91:0,42,457	0/0:15,0:15:20.91:0,21,203	1/1:4,0:6:4.99:17,5,0	1/1:3,5:9:11.40:137,11,0	1/1:6,5:11:23.50:186,24,0	0/0:19,0:21:41.64:0,42,428	1/1:15,4:20:31.35:356,31,0	1/1:7,6:13:27.01:333,27,0	0/0:14,0:14:30.03:0,30,291	0/0:13,0:16:23.40:0,23,248	0/0:24,0:24:29.88:0,30,339	0/0:13,0:13:15:0,15,145	0/1:11,4:15:1.61:261,0,2	1/1:3,1:17:27.96:129,28,0	1/1:7,1:19:30.46:133,30,0	0/0:17,0:18:28.91:0,29,246	0/0:20,0:21:29.61:0,30,269	0/0:12,0:13:20.66:0,21,186	0/0:21,0:21:53.89:0,54,523
chr10	37847479	.	CGTGTGTGTGTGT	C	3190	PASS	AB=0.760;AC=13;AF=0.232;AN=56;BaseQRankSum=6.126;DP=732;FS=6.386;HRun=0;HaplotypeScore=251.6352;InbreedingCoeff=0.7284;MQ=53.55;MQ0=24;MQRankSum=-8.409;QD=19.22;ReadPosRankSum=4.368;VQSLOD=1.6142;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,17:36:0:0,0,1	0/0:3,0:6:5.36:0,5,193	0/0:41,0:18:3.01:0,3,41	0/0:43,0:15:3.90:0,4,49	0/0:18,10:29:0.13:0,0,0	0/0:11,0:15:27.09:0,27,791	0/0:14,0:28:39.13:0,39,1138	0/0:25,0:27:36.12:0,36,912	1/1:8,11:19:17.63:604,18,0	0/0:26,0:35:64.26:0,64,1911	0/0:10,0:13:24.05:0,24,671	0/0:12,0:28:19.31:0,19,263	1/1:6,6:18:18.53:715,19,0	1/1:11,15:27:21.44:817,21,0	0/0:16,0:20:27.09:0,27,736	1/1:10,16:28:11.79:416,12,0	1/1:12,11:25:6.02:188,6,0	0/0:9,0:23:45.13:0,45,1341	0/0:21,0:26:38.68:0,39,964	0/1:13,0:19:53.66:54,0,831	0/0:39,0:49:84.74:0,85,2471	1/1:8,17:27:20.30:572,20,0	0/0:13,0:22:8.85:0,9,79	0/0:21,0:34:20.58:0,21,448	0/0:5,0:20:48.16:0,48,1663	0/0:24,0:26:36.12:0,36,1233	0/0:9,0:17:24.06:0,24,803	0/0:18,0:18:12.04:0,12,359
chr10	37848329	.	C	CT	3808.30	PASS	AB=0.617;AC=20;AF=0.357;AN=56;BaseQRankSum=0.232;DP=657;FS=1.209;HRun=11;HaplotypeScore=106.0729;InbreedingCoeff=0.8719;MQ=63.89;MQ0=11;MQRankSum=1.183;QD=14.43;ReadPosRankSum=0.827;VQSLOD=3.7492;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:17,2:50:96.03:518,96,0	0/0:9,0:9:20.86:0,21,159	0/0:33,0:12:0.56:0,1,55	0/0:33,0:14:20.81:0,21,131	1/1:8,16:24:41.87:394,42,0	0/0:26,1:28:42.45:0,42,483	0/0:20,0:19:41.82:0,42,324	0/0:25,0:25:20.51:0,21,236	1/1:2,25:27:51.10:516,51,0	0/0:20,0:20:35.81:0,36,278	0/0:16,0:16:32.78:0,33,249	1/1:19,8:27:53.22:503,53,0	0/1:4,13:16:0.68:188,0,1	0/1:9,9:18:0.75:188,0,1	0/0:25,2:27:29.29:0,29,409	1/1:3,12:15:30.06:305,30,0	1/1:7,20:28:32.05:452,32,0	0/0:21,0:22:51.86:0,52,382	0/0:29,2:30:20.32:0,20,340	0/0:24,0:24:50.73:0,51,392	0/0:14,0:14:26.88:0,27,209	1/1:6,12:18:18.50:181,19,0	1/1:2,14:17:20.88:197,21,0	1/1:5,17:22:36.53:367,37,0	0/0:22,2:24:30.22:0,30,391	0/0:27,0:27:10.43:0,10,350	0/0:22,0:22:59.75:0,60,461	0/0:16,0:15:38.85:0,39,302
chr10	37849336	.	AAGG	A	15802.49	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=5.074;DP=689;FS=16.220;HRun=0;HaplotypeScore=112.2232;InbreedingCoeff=0.9489;MQ=52.06;MQ0=11;MQRankSum=-0.617;QD=28.58;ReadPosRankSum=6.513;VQSLOD=3.9024;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,31:36:54.18:792,54,0	1/1:2,8:10:12.04:175,12,0	0/0:39,0:19:39.06:0,39,564	0/0:29,0:16:39.11:0,39,551	1/1:2,16:18:48.08:654,48,0	1/1:9,8:17:14.81:427,15,0	1/1:5,20:25:33.11:479,33,0	1/1:9,16:24:42:549,42,0	1/1:12,13:25:48.16:707,48,0	1/1:4,20:24:57.18:818,57,0	1/1:7,10:16:36.12:526,36,0	0/0:22,0:22:51.16:0,51,896	1/1:4,21:25:72.24:1050,72,0	1/1:6,18:24:58.96:841,59,0	1/1:6,33:39:78.26:1154,78,0	1/1:12,24:36:93.27:1325,93,0	1/1:5,18:24:53.85:767,54,0	1/1:3,9:12:21.07:312,21,0	1/1:6,12:17:33.11:471,33,0	1/1:3,18:21:36.12:528,36,0	1/1:11,32:43:66.22:972,66,0	1/1:16,11:26:42.14:612,42,0	0/0:15,0:15:36.12:0,36,668	0/0:31,0:31:75.18:0,75,1347	1/1:4,22:26:45.15:665,45,0	1/1:4,29:33:84.20:1178,84,0	1/1:2,21:23:51.17:757,51,0	1/1:3,2:5:3.01:45,3,0
chr10	37849394	.	A	AAGG	6562.96	PASS	AB=0.982;AC=25;AF=0.446;AN=56;BaseQRankSum=11.214;DP=675;FS=7.080;HRun=0;HaplotypeScore=286.0441;InbreedingCoeff=0.1323;MQ=41.30;MQ0=7;MQRankSum=-8.443;QD=14.17;ReadPosRankSum=-1.563;VQSLOD=2.9136;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:39,0:39:7.98:144,0,8	0/1:13,0:13:28.53:29,0,119	0/0:15,0:7:17.98:0,18,203	0/1:16,0:7:3.95:4,0,77	1/1:12,7:19:39.90:459,40,0	0/1:24,0:24:18.55:19,0,280	0/0:24,0:24:29.20:0,29,431	0/0:43,0:39:88.52:0,89,1173	1/1:24,10:34:98.89:1281,99,0	0/1:29,0:29:64.95:65,0,357	0/1:13,0:12:2.59:3,0,301	0/0:24,0:24:66.10:0,66,1008	1/1:31,3:34:81.25:970,81,0	1/1:14,6:20:48.02:713,48,0	0/1:41,0:41:99:116,0,462	1/1:31,7:39:99:1512,111,0	0/1:9,3:13:4.62:253,0,5	0/0:14,0:14:28.91:0,29,276	0/0:17,0:15:7.06:0,7,236	0/1:21,0:19:17.56:18,0,337	0/0:23,0:22:26.14:0,26,308	1/1:18,1:19:42.20:534,42,0	0/0:17,0:15:41.75:0,42,523	0/0:35,0:35:80.86:0,81,1144	0/1:19,0:18:10.72:11,0,173	0/1:38,0:38:99:344,0,138	0/1:22,0:22:32.75:33,0,247	0/1:10,0:10:13.58:58,0,14
chr10	37849409	.	G	GAGGAGA	12447.98	PASS	AB=0.990;AC=36;AF=0.643;AN=56;BaseQRankSum=-1.727;DP=706;FS=11.393;HRun=0;HaplotypeScore=325.0646;InbreedingCoeff=0.1870;MQ=36.83;MQ0=5;MQRankSum=-0.964;QD=21.03;ReadPosRankSum=7.264;VQSLOD=3.1015;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:50,0:50:99:336,0,213	1/1:11,0:11:9.63:269,10,0	0/0:19,0:8:20.96:0,21,427	0/0:19,0:6:12.81:0,13,178	0/1:22,0:22:66.19:66,0,113	1/1:21,4:25:34.80:1001,35,0	1/1:25,0:26:37.05:542,37,0	1/1:45,0:40:50.22:896,50,0	0/1:32,0:32:99:377,0,104	1/1:24,5:30:31.50:1391,32,0	1/1:12,1:12:20.08:257,20,0	0/0:25,0:25:62.96:0,63,1073	0/1:29,0:29:42.38:470,0,42	0/1:20,0:20:90.53:222,0,91	1/1:34,5:39:22.82:1065,23,0	0/1:36,0:36:99:640,0,178	0/1:14,0:14:14.77:15,0,71	1/1:10,3:13:35.93:638,36,0	1/1:15,3:17:1.80:653,2,0	1/1:20,2:20:29.08:449,29,0	1/1:24,0:24:21.96:339,22,0	0/1:25,0:25:99:122,0,118	0/0:15,0:14:23.60:0,24,346	0/0:36,0:36:64.83:0,65,883	1/1:18,0:18:23.51:566,24,0	0/1:36,1:38:99:1236,0,138	1/1:17,4:21:19.09:792,19,0	0/1:20,1:21:99:106,0,140
chr10	37849417	.	G	GA	1535.94	PASS	AB=0.883;AC=18;AF=0.321;AN=56;BaseQRankSum=4.413;DP=720;FS=151.899;HRun=1;HaplotypeScore=322.4390;InbreedingCoeff=-0.4621;MQ=35.71;MQ0=4;MQRankSum=0.553;QD=3.59;ReadPosRankSum=-1.636;VQSLOD=0.1121;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:49:54.41:0,54,698	0/1:6,5:12:10.15:144,0,10	0/0:29,0:13:32.93:0,33,426	0/0:24,0:9:19.85:0,20,224	0/1:19,0:19:86.63:103,0,87	0/1:26,1:28:13.05:13,0,405	0/1:16,3:21:80.89:81,0,427	0/0:39,0:35:69.09:0,69,1063	0/1:31,0:31:37.53:38,0,476	0/1:29,0:31:99:195,0,533	0/1:12,1:12:22.52:23,0,33	0/0:26,0:26:69.23:0,69,957	0/1:32,0:32:33.54:34,0,378	0/1:19,0:19:19.04:19,0,224	0/1:25,12:42:99:497,0,176	0/1:36,0:36:5.13:5,0,562	0/0:15,0:15:3.92:0,4,219	0/1:10,1:12:16.14:16,0,304	0/1:17,2:19:61.25:61,0,408	0/1:16,5:20:90.59:109,0,91	0/1:21,3:24:31.52:32,0,96	0/1:26,0:26:90.40:90,0,267	0/0:14,0:13:21.07:0,21,293	0/0:36,0:36:56.29:0,56,764	0/1:13,4:18:91.24:91,0,164	0/0:39,0:39:24.32:0,24,539	0/1:14,4:22:99:143,0,148	0/0:21,0:21:37.69:0,38,329
chr10	37849422	.	AG	A	3159.25	PASS	AB=0.882;AC=29;AF=0.518;AN=56;BaseQRankSum=3.878;DP=707;FS=3.689;HRun=2;HaplotypeScore=314.0754;InbreedingCoeff=-0.0702;MQ=35.21;MQ0=3;MQRankSum=-0.412;QD=5.85;ReadPosRankSum=-0.498;VQSLOD=0.1264;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:42,3:45:96.58:97,0,102	1/1:3,7:10:20.16:162,20,0	0/0:32,0:16:35.85:0,36,515	0/0:27,0:12:21.33:0,21,386	0/1:20,0:20:1.80:2,0,81	1/1:27,2:29:14.35:171,14,0	1/1:14,6:20:11.96:213,12,0	0/0:33,0:30:65.62:0,66,545	0/1:29,0:29:60.92:61,0,197	0/1:21,11:33:99:435,0,173	1/1:11,1:11:4.99:25,5,0	0/0:24,0:24:56.72:0,57,662	0/1:30,0:30:28.69:29,0,206	0/1:17,0:17:46.46:46,0,50	1/1:18,24:42:76.96:680,77,0	0/1:34,0:34:99:104,0,157	0/1:17,0:17:28.11:28,0,161	0/1:12,2:14:62.71:117,0,63	0/1:16,3:19:65.26:65,0,184	0/1:10,7:16:6.44:110,0,6	0/1:17,7:23:11.62:60,0,12	0/1:26,0:26:39.24:39,0,79	0/0:14,0:13:19.28:0,19,260	0/0:37,0:37:36.96:0,37,471	1/1:15,5:20:32.73:260,33,0	0/1:25,15:40:39.60:298,0,40	1/1:13,8:21:2.67:187,3,0	0/1:7,14:21:10.36:151,0,10
chr10	37849424	.	T	TAGA	7647.90	PASS	AB=0.932;AC=32;AF=0.571;AN=56;BaseQRankSum=2.650;DP=642;FS=28.168;HRun=0;HaplotypeScore=299.8010;InbreedingCoeff=0.1515;MQ=35.81;MQ0=4;MQRankSum=-2.932;QD=15.51;ReadPosRankSum=2.712;VQSLOD=3.3071;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:38,0:38:3.71:4,0,48	1/1:8,0:8:20.65:286,21,0	0/0:32,0:16:32.16:0,32,560	0/0:27,0:12:21.44:0,21,330	0/0:16,0:16:0.24:0,0,51	1/1:26,3:30:35.80:368,36,0	0/1:16,3:19:6.70:150,0,7	1/1:18,0:29:30.76:1109,31,0	0/1:22,0:22:1.69:2,0,68	0/1:24,6:33:31.33:1026,0,31	1/1:11,0:11:6.02:138,6,0	0/0:24,0:24:59.88:0,60,827	0/1:27,0:27:19.97:20,0,63	0/1:13,0:13:34.32:46,0,34	1/1:31,5:36:40.29:802,40,0	0/1:30,0:30:22.04:22,0,80	0/1:14,0:14:8.22:8,0,60	0/1:7,3:12:22.75:314,0,23	1/1:11,3:15:14.93:530,15,0	0/1:15,1:16:8.50:280,0,9	1/1:16,3:21:5.25:88,5,0	0/1:24,0:24:32.76:33,0,56	0/0:14,0:13:20.74:0,21,270	0/0:35,0:35:37.64:0,38,525	0/1:13,0:14:8:261,0,8	1/1:32,4:37:60.45:1201,60,0	1/1:14,3:20:39.06:570,39,0	1/1:16,0:17:47.59:391,48,0
chr10	37849453	.	A	ATGATGATGT	15855.85	PASS	AB=1.000;AC=30;AF=0.536;AN=56;BaseQRankSum=9.793;DP=700;FS=23.042;HRun=0;HaplotypeScore=307.6428;InbreedingCoeff=-0.0027;MQ=47.48;MQ0=1;MQRankSum=-9.362;QD=28.62;ReadPosRankSum=1.725;VQSLOD=3.2270;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:41:99:1768,101,0	0/1:8,0:8:10.86:317,0,11	0/0:16,0:11:26.02:0,26,379	0/0:28,0:18:51.01:0,51,624	1/1:7,5:13:29.91:484,30,0	0/1:28,0:28:93.25:300,0,93	0/1:24,0:24:99:250,0,136	0/1:34,0:33:26.20:26,0,491	1/1:8,19:28:33.11:1457,33,0	0/1:39,0:39:99:1031,0,229	0/1:12,0:11:37.94:136,0,38	0/0:22,0:22:36.07:0,36,731	1/1:15,2:35:57.19:2099,57,0	1/1:13,0:18:41.84:815,42,0	0/1:42,0:42:99:1210,0,147	1/1:10,28:39:57.19:2486,57,0	1/1:6,13:20:20.96:859,21,0	0/1:13,0:13:76.38:160,0,76	0/1:16,0:16:99:208,0,191	0/1:18,0:17:83.85:292,0,84	0/1:26,0:25:43.30:43,0,168	1/1:8,0:30:41.14:1145,41,0	0/0:16,0:15:14.83:0,15,198	0/1:32,0:32:22.23:22,0,476	0/1:18,0:18:99:295,0,111	0/0:44,0:44:57.39:0,57,710	0/1:20,0:19:56.84:453,0,57	0/0:20,0:20:49.95:0,50,444
chr10	37849706	.	C	CTT	6343.12	PASS	AB=1.000;AC=36;AF=0.643;AN=56;BaseQRankSum=-4.082;DP=416;FS=17.868;HRun=5;HaplotypeScore=99.0300;InbreedingCoeff=0.6523;MQ=64.61;MQ0=11;MQRankSum=-1.713;QD=21.72;ReadPosRankSum=-1.798;VQSLOD=1.7660;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:26:11.32:11,0,12	1/1:2,6:8:18.04:271,18,0	0/0:33,0:17:37.21:0,37,313	0/0:18,0:8:11.16:0,11,122	0/0:11,0:11:6.37:0,6,20	1/1:10,3:13:24.03:307,24,0	1/1:18,1:18:41.99:482,42,0	1/1:28,5:31:44.36:1017,44,0	1/1:4,0:4:0.46:1,0,0	1/1:8,2:10:27.07:417,27,0	1/1:7,0:7:21.05:305,21,0	0/0:14,0:14:11.67:0,12,128	0/0:8,0:7:2.72:0,3,12	0/0:10,0:10:5.24:0,5,22	1/1:3,9:12:12.04:211,12,0	0/1:10,0:10:7.69:8,0,31	0/1:23,0:21:15.04:15,0,57	1/1:10,7:16:42.06:628,42,0	1/1:5,19:22:59.60:848,60,0	1/1:9,2:11:21.05:314,21,0	1/1:3,4:7:12.01:179,12,0	0/1:10,0:9:0.21:0,0,2	0/0:17,0:16:42.10:0,42,526	0/0:13,0:13:29.81:0,30,389	1/1:10,1:11:24.01:289,24,0	1/1:17,3:20:45:582,45,0	1/1:6,11:17:19.91:259,20,0	1/1:7,2:9:14.94:198,15,0
chr10	37849710	.	TC	T	4423.17	PASS	AB=0.935;AC=46;AF=0.821;AN=56;BaseQRankSum=-1.319;DP=404;FS=6.462;HRun=1;HaplotypeScore=97.6695;InbreedingCoeff=0.5544;MQ=58.99;MQ0=15;MQRankSum=-1.924;QD=13.57;ReadPosRankSum=2.631;VQSLOD=4.0228;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:26,1:26:71:580,71,0	1/1:6,2:8:5.49:54,5,0	0/0:31,0:15:1.65:0,2,197	0/0:16,0:6:9.13:0,9,73	1/1:7,4:11:30.71:234,31,0	1/1:8,4:12:20.89:183,21,0	1/1:13,7:18:27.68:352,28,0	1/1:27,2:27:11.57:369,12,0	1/1:3,0:3:9:80,9,0	1/1:9,2:11:12.50:156,13,0	1/1:6,2:8:15.73:149,16,0	0/0:14,0:14:9.23:0,9,52	1/1:7,1:7:20.88:163,21,0	1/1:7,1:8:20.66:170,21,0	1/1:12,1:12:5.81:21,6,0	1/1:6,4:10:29.98:271,30,0	1/1:19,4:19:23.36:372,23,0	0/1:17,3:19:10.50:144,0,11	1/1:21,1:20:25.88:236,26,0	1/1:9,1:10:16.64:123,17,0	1/1:4,2:6:2.54:45,3,0	1/1:8,1:8:20.10:142,20,0	0/0:17,0:16:16.28:0,16,168	0/1:14,0:13:2.88:3,0,28	1/1:8,4:12:19.92:195,20,0	1/1:16,4:20:32.77:250,33,0	1/1:11,4:15:1.27:61,1,0	1/1:7,0:7:3.77:69,4,0
chr10	37849711	.	CT	C	251.15	PASS	AB=0.891;AC=21;AF=0.375;AN=56;BaseQRankSum=3.926;DP=419;FS=3.438;HRun=14;HaplotypeScore=120.3703;InbreedingCoeff=0.2876;MQ=58.00;MQ0=16;MQRankSum=-2.948;QD=1.19;ReadPosRankSum=7.357;VQSLOD=-0.3914;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:31,0:30:4.90:5,0,8	0/0:8,0:8:7.94:0,8,71	0/0:31,0:15:10.28:0,10,61	0/0:16,0:6:6.72:0,7,41	1/1:12,0:12:1.67:5,2,0	0/1:12,0:12:5.85:6,0,16	1/1:20,0:18:5.60:22,6,0	0/0:26,0:24:20.34:0,20,145	0/0:4,0:4:0:0,0,0	0/1:11,0:11:0.61:1,0,28	0/0:8,0:8:0.09:0,0,13	0/1:4,10:14:11.58:12,0,43	1/1:10,0:8:1.41:5,1,0	1/1:11,0:11:1.21:4,1,0	0/0:14,0:13:7.54:0,8,53	1/1:12,0:12:6.11:19,6,0	0/1:25,0:21:6.70:7,0,13	0/0:20,0:19:11.58:0,12,120	0/0:22,0:20:14.69:0,15,108	0/0:10,0:10:3.10:0,3,33	0/0:6,0:6:6.36:0,6,41	0/1:10,0:9:0.36:0,0,8	0/1:8,7:16:2.92:110,0,3	1/1:3,11:13:26.62:185,27,0	1/1:12,0:12:4.46:14,4,0	0/0:21,0:21:4.80:0,5,65	0/0:15,0:15:4.73:0,5,64	0/0:7,0:7:1.92:0,2,4
chr10	37849715	.	TTTTTTTTTTTGGTTC	T	2932.25	PASS	AB=0.995;AC=30;AF=0.536;AN=56;BaseQRankSum=6.918;DP=424;FS=1.155;HRun=0;HaplotypeScore=193.3441;InbreedingCoeff=-0.1926;MQ=56.13;MQ0=21;MQRankSum=-4.863;QD=8.94;ReadPosRankSum=1.704;VQSLOD=2.4293;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:30,1:30:4.65:213,5,0	0/1:8,0:8:22.40:22,0,117	0/0:30,0:14:18.51:0,19,280	0/0:16,0:6:7.82:0,8,72	1/1:12,2:13:8.78:178,9,0	0/1:12,0:12:46.75:114,0,47	1/1:17,0:15:9.26:300,9,0	0/1:28,0:25:99:140,0,406	1/1:5,0:5:2.91:35,3,0	0/1:12,0:12:66.53:97,0,67	0/1:8,0:8:41.37:45,0,41	0/0:17,0:17:18.53:0,19,796	1/1:11,0:8:5.84:127,6,0	1/1:10,1:11:12.34:197,12,0	0/1:16,0:14:4.68:5,0,146	1/1:10,2:12:17.71:486,18,0	0/1:23,2:21:99:350,0,167	0/1:20,0:19:99:132,0,261	0/1:19,0:17:20.51:21,0,175	0/1:9,0:9:25.50:26,0,70	0/1:5,0:5:20.40:20,0,110	0/1:9,0:8:8.15:100,0,8	0/0:17,0:17:31.35:0,31,1393	0/0:15,0:14:30.57:0,31,1611	0/1:13,0:13:12.18:172,0,12	0/1:22,0:21:99:218,0,123	0/1:14,0:14:97.24:97,0,136	0/1:7,0:7:8.91:9,0,26
chr10	37849719	.	TTTTTTTGGTTC	T	6457.52	PASS	AB=1.000;AC=45;AF=0.804;AN=56;BaseQRankSum=4.491;DP=399;FS=0.000;HRun=0;HaplotypeScore=141.6539;InbreedingCoeff=0.5183;MQ=51.17;MQ0=24;MQRankSum=-5.264;QD=19.28;ReadPosRankSum=-1.430;VQSLOD=3.8200;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:28:8.47:341,8,0	1/1:6,0:6:12.32:155,12,0	0/1:27,0:11:8.98:9,0,110	0/0:15,0:5:5.93:0,6,49	1/1:12,0:11:9.03:211,9,0	1/1:11,1:12:11.32:273,11,0	1/1:15,3:14:30.10:743,30,0	0/1:25,0:22:99:319,0,119	1/1:4,0:4:6.02:133,6,0	1/1:11,1:12:20.73:320,21,0	1/1:6,0:6:8.90:130,9,0	0/0:17,0:17:21.54:0,22,714	1/1:9,0:6:6.02:113,6,0	1/1:11,0:11:20.99:353,21,0	1/1:16,0:14:17.55:145,18,0	1/1:11,0:11:18.06:432,18,0	0/1:25,0:20:95.15:334,0,95	1/1:18,2:18:42.80:532,43,0	1/1:17,0:15:20.74:218,21,0	1/1:9,0:9:7.05:105,7,0	1/1:6,0:5:12.93:146,13,0	1/1:7,0:6:4.83:87,5,0	0/0:16,0:15:29.21:0,29,1019	0/0:16,0:15:36.59:0,37,1291	1/1:10,1:11:19.31:446,19,0	1/1:21,1:21:32.21:582,32,0	1/1:13,0:13:16.36:241,16,0	1/1:7,0:7:7.84:90,8,0
chr10	37849720	.	TTTTTTGGTTC	T	5756.69	PASS	AB=0.976;AC=45;AF=0.804;AN=56;BaseQRankSum=4.725;DP=391;FS=0.000;HRun=0;HaplotypeScore=134.9446;InbreedingCoeff=0.5627;MQ=45.66;MQ0=26;MQRankSum=-4.944;QD=17.55;ReadPosRankSum=-1.494;VQSLOD=3.7120;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:27:8:304,8,0	1/1:4,2:6:12.76:125,13,0	0/1:23,0:8:1.06:1,0,86	0/0:14,0:4:5.92:0,6,41	1/1:11,0:10:9.03:189,9,0	1/1:10,3:13:12.66:243,13,0	1/1:13,4:13:30.44:650,30,0	0/1:24,2:22:99:289,0,105	1/1:4,0:4:6.02:117,6,0	1/1:10,1:11:20.70:272,21,0	1/1:3,2:5:8.90:115,9,0	0/0:17,0:17:21.54:0,22,649	1/1:9,0:6:6.02:119,6,0	1/1:11,0:11:20.98:328,21,0	1/1:14,1:13:17.54:135,18,0	1/1:11,0:11:18.06:394,18,0	0/1:25,0:20:83.18:307,0,83	1/1:19,1:18:42.74:452,43,0	1/1:15,1:14:20.55:185,21,0	1/1:9,1:10:7.05:89,7,0	1/1:5,1:5:12.97:143,13,0	1/1:6,0:5:5.05:82,5,0	0/0:16,0:15:28.54:0,29,904	0/0:16,0:15:36.59:0,37,1155	1/1:8,3:11:19.61:379,20,0	1/1:19,3:21:32.21:517,32,0	1/1:13,1:14:19.52:247,20,0	1/1:7,0:7:7.83:75,8,0
chr10	37849724	.	TTGGTTC	T	5687.87	PASS	AB=0.905;AC=45;AF=0.804;AN=56;BaseQRankSum=4.319;DP=319;FS=0.677;HRun=0;HaplotypeScore=85.3626;InbreedingCoeff=0.4693;MQ=42.68;MQ0=25;MQRankSum=-4.751;QD=21.79;ReadPosRankSum=-0.599;VQSLOD=4.1752;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:17:2.43:275,2,0	1/1:5,0:5:11.53:89,12,0	0/1:19,0:6:18.66:19,0,30	0/0:9,0:4:4.55:0,5,41	1/1:8,0:7:9.03:163,9,0	1/1:14,0:14:13.75:190,14,0	1/1:14,2:12:30.57:572,31,0	0/1:12,8:16:54.87:366,0,55	1/1:4,0:4:6.02:116,6,0	1/1:5,4:9:23.71:334,24,0	1/1:4,0:4:9.37:93,9,0	0/0:19,0:19:27.09:0,27,585	1/1:5,0:2:6.02:94,6,0	1/1:6,0:6:18.06:338,18,0	1/1:10,1:9:15.51:200,16,0	1/1:7,0:7:18.06:296,18,0	0/1:16,0:12:34.93:266,0,35	1/1:12,9:19:42.49:568,42,0	1/1:10,1:9:8.22:196,8,0	1/1:4,6:10:7.05:68,7,0	1/1:5,1:5:14.73:140,15,0	1/1:4,0:3:3.01:51,3,0	0/0:15,0:14:27.27:0,27,566	0/0:15,0:14:36.12:0,36,708	1/1:6,4:10:19.62:347,20,0	1/1:10,8:17:37.29:519,37,0	1/1:11,1:12:19.50:257,19,0	1/1:2,4:6:8.06:132,8,0
chr10	37849725	.	TGGTTC	T	4978.34	PASS	AB=0.901;AC=44;AF=0.786;AN=56;BaseQRankSum=4.307;DP=283;FS=0.000;HRun=0;HaplotypeScore=73.5053;InbreedingCoeff=0.4094;MQ=40.59;MQ0=24;MQRankSum=-4.183;QD=22.22;ReadPosRankSum=0.491;VQSLOD=4.4057;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,15:17:2.43:284,2,0	1/1:4,0:4:8.42:63,8,0	0/1:14,0:5:29.83:31,0,30	0/0:8,0:4:4.55:0,5,41	1/1:5,3:7:9.03:157,9,0	1/1:5,6:11:10.62:149,11,0	1/1:13,1:11:30.10:507,30,0	0/1:16,0:12:52.69:312,0,53	1/1:0,4:4:6.02:116,6,0	1/1:7,0:7:18.03:258,18,0	1/1:4,0:4:9.37:86,9,0	0/0:19,0:19:26.96:0,27,548	1/1:4,1:2:6.02:104,6,0	1/1:1,5:6:18.06:332,18,0	1/1:9,1:8:12.14:172,12,0	1/1:4,3:7:18.06:298,18,0	0/1:8,7:13:30.21:246,0,30	1/1:16,0:14:28.70:423,29,0	0/1:8,0:7:1.49:158,0,1	1/1:9,0:9:4.83:53,5,0	1/1:4,0:3:8.97:101,9,0	1/1:2,2:3:3.01:51,3,0	0/0:15,0:14:27.12:0,27,511	0/0:16,0:15:36.03:0,36,665	1/1:8,1:9:18.06:300,18,0	1/1:13,1:13:30.25:439,30,0	1/1:8,0:9:17.79:224,18,0	1/1:5,0:5:6.02:113,6,0
chr10	37853205	.	A	ACC	10478.02	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-14.299;DP=627;FS=3.218;HRun=7;HaplotypeScore=71.9234;InbreedingCoeff=0.9994;MQ=90.07;MQ0=1;MQRankSum=-6.037;QD=35.28;ReadPosRankSum=-1.055;VQSLOD=4.6108;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,117,1362	1/1:3,12:14:27.09:443,27,0	0/0:27,0:26:69.17:0,69,786	0/0:23,0:23:41.10:0,41,434	0/0:14,0:14:39.11:0,39,454	1/1:0,16:16:36.12:590,36,0	1/1:7,12:19:30.10:484,30,0	1/1:8,17:25:51.10:746,51,0	0/0:28,0:28:78.23:0,78,909	1/1:2,17:20:54.15:835,54,0	1/1:2,11:14:30.10:489,30,0	0/0:28,0:28:69.19:0,69,804	0/0:22,0:22:60.17:0,60,696	0/0:24,0:24:72.21:0,72,839	1/1:3,20:24:57.14:905,57,0	0/0:30,0:30:90.27:0,90,1049	0/0:22,0:22:60.13:0,60,683	1/1:0,19:19:51.17:837,51,0	1/1:3,15:18:45.13:681,45,0	1/1:1,10:12:27.05:413,27,0	1/1:4,36:42:84.29:1366,84,0	0/0:21,0:21:63.19:0,63,734	0/0:16,0:16:48.13:0,48,543	0/0:35,0:35:90.25:0,90,1049	1/1:4,13:19:26.67:442,27,0	1/1:2,21:23:59.66:917,60,0	1/1:0,16:17:44.89:738,45,0	1/1:2,12:14:36.12:591,36,0
chr10	37854757	.	TAA	T	3134.77	PASS	AB=0.613;AC=29;AF=0.518;AN=56;BaseQRankSum=-0.085;DP=510;FS=8.021;HRun=15;HaplotypeScore=88.1365;InbreedingCoeff=0.8780;MQ=73.38;MQ0=0;MQRankSum=0.248;QD=12.06;ReadPosRankSum=4.418;VQSLOD=2.5646;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:49:82.39:0,82,753	1/1:0,7:7:14.94:132,15,0	0/0:15,0:14:23.64:0,24,261	0/0:18,0:15:9.43:0,9,93	0/0:3,0:11:32.95:0,33,335	1/1:8,11:21:22.33:242,22,0	1/1:6,16:22:34.51:352,35,0	1/1:10,16:28:32.53:399,33,0	0/0:5,0:17:22.83:0,23,199	1/1:8,9:17:7.35:224,7,0	1/1:3,4:7:8.91:79,9,0	0/0:12,0:15:35.05:0,35,369	0/0:6,0:15:26.38:0,26,263	0/0:7,0:12:20.98:0,21,191	1/1:7,14:22:32.74:335,33,0	0/0:7,0:15:33.08:0,33,388	0/0:11,0:34:50.99:0,51,476	1/1:9,17:26:23.69:350,24,0	1/1:9,15:24:41.78:369,42,0	1/1:3,7:12:2.56:107,3,0	1/1:11,15:28:36.81:297,37,0	0/0:6,0:14:30.44:0,30,298	0/0:6,0:8:14:0,14,123	0/0:24,0:25:59.61:0,60,712	1/1:2,7:9:5.90:53,6,0	0/1:7,10:19:0.72:191,0,1	1/1:1,10:12:17.69:144,18,0	1/1:1,3:4:8.98:79,9,0
chr10	37856912	.	CACAGTCACACACAGTCACAT	C	9144.51	PASS	AB=0.800;AC=15;AF=0.268;AN=56;BaseQRankSum=11.089;DP=1080;FS=11.546;HRun=0;HaplotypeScore=559.7522;InbreedingCoeff=0.9141;MQ=66.39;MQ0=15;MQRankSum=-8.989;QD=55.76;ReadPosRankSum=-2.933;VQSLOD=1.7145;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:15,9:24:26.02:1036,26,0	0/0:9,0:9:24.08:0,24,2081	0/0:89,0:57:99:0,125,5658	0/0:105,0:58:89.70:0,90,5397	1/1:0,23:23:17.94:624,18,0	0/0:43,0:42:82.27:0,82,7008	0/0:33,0:33:79.39:0,79,4591	0/0:56,0:56:99:0,163,9272	1/1:11,18:29:57.14:2379,57,0	0/0:59,0:57:99:0,171,12028	0/0:30,0:30:76.20:0,76,5108	0/0:53,0:52:99:0,145,8314	1/1:3,10:13:27.09:1159,27,0	1/1:7,13:20:36.08:1256,36,0	0/0:54,0:54:99:0,112,8128	1/1:8,11:18:30.09:1021,30,0	0/1:12,4:16:10.56:621,0,11	0/0:34,0:34:96.24:0,96,7522	0/0:31,0:30:90.27:0,90,6239	0/0:31,0:31:87.27:0,87,6436	0/0:86,0:86:99:0,204,13639	1/1:5,15:20:34.84:1049,35,0	0/0:33,0:33:89.35:0,89,5372	0/0:54,0:54:99:0,144,9072	0/0:23,0:22:63.20:0,63,4142	0/0:56,0:56:99:0,169,12359	0/0:24,0:23:63.69:0,64,4848	0/0:11,0:10:30.10:0,30,2417
chr10	37856978	.	GAC	G	19535.71	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=1.035;DP=965;FS=2.937;HRun=0;HaplotypeScore=256.5015;InbreedingCoeff=0.9920;MQ=57.20;MQ0=12;MQRankSum=2.740;QD=22.56;ReadPosRankSum=7.554;VQSLOD=5.0239;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,27:35:37.46:452,37,0	1/1:2,12:14:30.10:375,30,0	0/0:48,0:34:50.80:0,51,707	0/0:50,0:44:58.57:0,59,876	1/1:11,11:22:18.03:226,18,0	1/1:4,35:38:66.29:928,66,0	1/1:10,29:39:51.61:639,52,0	1/1:20,43:63:99:1468,99,0	1/1:6,34:40:75.63:920,76,0	1/1:4,48:50:99:1724,144,0	1/1:4,21:26:48.14:601,48,0	1/1:5,29:34:78.24:963,78,0	1/1:8,25:33:60.17:750,60,0	1/1:3,23:27:57:689,57,0	1/1:6,35:42:75.23:938,75,0	1/1:4,25:28:51.14:638,51,0	1/1:4,14:18:21.07:263,21,0	1/1:6,20:26:48.15:600,48,0	1/1:9,18:26:54.11:635,54,0	1/1:9,13:22:51:588,51,0	1/1:10,51:61:90.73:1126,91,0	1/1:7,25:32:48.12:600,48,0	1/1:9,18:28:23.03:514,23,0	1/1:10,29:39:74.26:857,74,0	1/1:2,16:17:33.11:413,33,0	1/1:12,41:54:99:1466,116,0	1/1:6,21:26:51.16:638,51,0	1/1:4,14:17:42.13:525,42,0
chr10	37857082	.	ACT	A	5687.35	PASS	AB=1.000;AC=52;AF=0.929;AN=56;BaseQRankSum=-0.021;DP=731;FS=1.155;HRun=0;HaplotypeScore=219.6038;InbreedingCoeff=0.4373;MQ=39.73;MQ0=80;MQRankSum=0.048;QD=8.08;ReadPosRankSum=-2.578;VQSLOD=3.9843;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:39,0:31:22.97:168,23,0	1/1:5,2:8:17.80:127,18,0	0/0:27,0:4:5.90:0,6,38	0/1:39,0:10:1.30:1,0,72	1/1:17,1:17:12.15:166,12,0	1/1:27,3:28:30.20:198,30,0	1/1:26,1:26:34.69:257,35,0	1/1:31,0:28:65.61:501,66,0	1/1:33,0:29:22.04:325,22,0	1/1:40,0:33:87.76:606,88,0	1/1:13,2:15:7.70:51,8,0	1/1:31,0:26:20.15:129,20,0	1/1:16,0:15:31.87:229,32,0	0/1:22,0:21:4.50:73,0,5	1/1:29,5:30:41.26:293,41,0	1/1:18,0:14:4.99:108,5,0	1/1:11,0:11:11.08:71,11,0	1/1:15,2:14:37.54:253,38,0	1/1:14,3:11:32.32:233,32,0	1/1:22,3:22:11.45:82,11,0	1/1:54,0:41:31.93:243,32,0	1/1:33,0:29:41.33:367,41,0	1/1:15,0:11:3:25,3,0	1/1:37,0:29:10.03:75,10,0	1/1:23,4:24:26.59:191,27,0	1/1:29,1:25:47.48:430,47,0	1/1:11,8:20:43.72:305,44,0	1/1:6,4:10:23.34:179,23,0
chr10	37857091	.	CACACACACACACACAG	C	6564.12	PASS	AB=0.988;AC=28;AF=0.500;AN=56;BaseQRankSum=-1.801;DP=710;FS=1.677;HRun=0;HaplotypeScore=287.2428;InbreedingCoeff=0.2127;MQ=41.93;MQ0=73;MQRankSum=-3.557;QD=13.40;ReadPosRankSum=1.996;VQSLOD=3.5121;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:40,0:31:35.42:35,0,290	1/1:8,0:8:9.20:261,9,0	0/0:29,0:7:21.03:0,21,389	0/0:41,0:13:21.75:0,22,457	0/1:17,0:16:36.80:37,0,464	1/1:28,0:25:24.52:424,25,0	1/1:18,0:17:12.53:234,13,0	1/1:27,0:24:5.10:191,5,0	0/1:32,0:28:4.29:4,0,440	0/1:42,0:34:99:628,0,117	1/1:15,1:15:9:288,9,0	0/0:32,0:28:20.21:0,20,402	0/0:17,0:16:9.05:0,9,103	0/0:24,0:23:19.79:0,20,401	1/1:35,0:31:26.28:372,26,0	0/0:18,0:14:15.14:0,15,358	0/0:9,0:9:12.89:0,13,154	0/1:12,2:11:39.18:983,0,39	0/1:18,0:14:26.24:339,0,26	1/1:15,1:13:6.86:178,7,0	0/1:49,0:36:27.58:199,0,28	0/0:34,0:30:15.15:0,15,739	0/0:15,0:12:2.24:0,2,11	0/1:37,0:30:50.26:50,0,126	1/1:25,0:22:26.15:509,26,0	0/1:37,0:32:99:177,0,226	1/1:19,0:18:33.13:1348,33,0	0/1:12,0:11:99:307,0,112
chr10	37857093	.	CACACACACACACAG	C	5642.79	PASS	AB=0.987;AC=31;AF=0.554;AN=56;BaseQRankSum=-1.717;DP=661;FS=5.783;HRun=0;HaplotypeScore=260.0554;InbreedingCoeff=0.0117;MQ=43.00;MQ0=68;MQRankSum=-2.555;QD=11.15;ReadPosRankSum=2.108;VQSLOD=3.2605;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:39,0:30:29.66:30,0,245	1/1:3,2:5:7.76:200,8,0	0/0:28,0:7:21.03:0,21,375	0/0:41,0:15:28.97:0,29,518	0/1:17,0:16:64.80:65,0,352	1/1:22,3:22:18.74:317,19,0	1/1:14,1:14:11.60:143,12,0	1/1:18,0:15:7.64:111,8,0	0/1:33,0:29:11.34:11,0,347	0/1:38,0:30:99:429,0,120	1/1:12,1:12:9:228,9,0	0/0:32,0:28:17.83:0,18,344	0/0:16,0:15:2.04:0,2,73	0/0:23,0:23:20:0,20,321	1/1:27,4:27:27.15:342,27,0	0/1:18,0:14:8.41:8,0,248	0/1:11,0:11:3.82:4,0,98	0/1:14,1:12:37.72:801,0,38	0/1:15,2:13:27.02:338,0,27	1/1:14,2:13:7.45:141,7,0	0/1:43,0:32:4.91:136,0,5	0/1:33,0:29:33.88:34,0,560	0/0:14,0:11:2.29:0,2,12	0/1:37,0:31:48.85:49,0,101	1/1:16,4:18:25.08:358,25,0	0/1:34,0:29:73.19:319,0,73	1/1:10,8:17:34.35:1064,34,0	0/1:10,0:9:88.67:516,0,89
chr10	37857095	.	CACACACACACAG	C	4886.68	PASS	AB=0.972;AC=34;AF=0.607;AN=56;BaseQRankSum=-0.316;DP=659;FS=1.114;HRun=0;HaplotypeScore=247.5054;InbreedingCoeff=-0.0858;MQ=44.80;MQ0=67;MQRankSum=-1.830;QD=8.93;ReadPosRankSum=3.863;VQSLOD=3.5784;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:40,0:31:73.92:74,0,216	1/1:5,0:5:6:172,6,0	0/0:30,0:9:27.02:0,27,448	0/0:42,0:16:30.88:0,31,572	0/1:16,0:15:91.98:92,0,273	1/1:25,0:22:20.89:291,21,0	1/1:16,0:15:4.87:88,5,0	1/1:20,0:17:7.68:97,8,0	0/1:33,0:29:9.18:9,0,278	0/1:37,0:29:99:344,0,131	1/1:13,0:12:8.98:165,9,0	0/1:30,0:26:27.68:28,0,234	0/1:17,0:16:0.41:0,0,58	0/0:25,0:24:18.73:0,19,260	1/1:28,1:25:28.24:291,28,0	0/1:18,0:15:13.27:13,0,205	0/1:11,0:11:16.29:16,0,117	0/1:15,0:12:33.43:706,0,33	0/1:16,1:13:31:317,0,31	1/1:17,0:14:7.95:101,8,0	1/1:44,0:33:9.24:145,9,0	0/1:33,0:29:27.83:28,0,420	0/0:15,0:12:1.19:0,1,10	0/1:35,0:29:67.60:71,0,68	1/1:20,0:18:22.22:304,22,0	0/1:27,1:23:89.98:245,0,90	1/1:19,0:18:34.51:904,35,0	0/1:5,4:8:72.48:387,0,72
chr10	37857362	.	CT	C	1875.71	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=11.114;DP=753;FS=1.725;HRun=1;HaplotypeScore=83.2676;InbreedingCoeff=0.9959;MQ=63.92;MQ0=1;MQRankSum=1.866;QD=34.74;ReadPosRankSum=3.203;VQSLOD=3.8181;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,54:54:99:1971,159,0	0/0:7,0:7:21.07:0,21,333	0/0:30,0:28:74.42:0,74,1084	0/0:28,0:26:62.94:0,63,919	0/0:25,0:25:63.20:0,63,983	0/0:15,0:15:45.13:0,45,694	0/0:37,0:37:99:0,111,1718	0/0:40,0:40:99:0,120,1837	0/0:29,0:29:87.30:0,87,1391	0/0:32,0:31:93.31:0,93,1439	0/0:17,0:17:45.15:0,45,717	0/0:21,0:21:63.20:0,63,982	0/0:31,0:31:93.30:0,93,1459	0/0:17,0:17:51.15:0,51,761	0/0:19,0:19:57.18:0,57,887	0/0:20,0:20:60.19:0,60,937	0/0:31,0:31:93.29:0,93,1460	0/0:30,0:30:90.26:0,90,1377	0/0:36,0:35:99:0,105,1645	0/0:21,0:21:54.18:0,54,863	0/0:42,0:42:99:0,126,1960	0/0:18,0:18:42.14:0,42,670	0/0:16,0:16:45.15:0,45,716	0/0:33,0:33:99:0,99,1524	0/0:24,0:24:72.23:0,72,1127	0/0:34,0:34:99:0,102,1608	0/0:30,0:30:90.28:0,90,1388	0/0:16,0:16:48.16:0,48,767
chr10	37857723	.	ATGGTG	A	6524.92	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=13.260;DP=584;FS=16.881;HRun=0;HaplotypeScore=120.6825;InbreedingCoeff=0.9991;MQ=82.40;MQ0=0;MQRankSum=-13.865;QD=45.95;ReadPosRankSum=2.762;VQSLOD=4.2432;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,30:31:66.18:1411,66,0	0/0:8,0:8:24.08:0,24,749	0/0:23,0:23:69.24:0,69,2079	0/0:17,0:17:48.16:0,48,1430	1/1:2,22:24:42.01:765,42,0	0/0:23,0:23:66.16:0,66,2047	0/0:28,0:28:81.19:0,81,2279	0/0:25,0:25:75.24:0,75,2106	1/1:0,16:16:36.12:798,36,0	0/0:28,0:28:81.27:0,81,2440	0/0:14,0:14:42.14:0,42,1333	0/0:19,0:19:54.19:0,54,1655	1/1:0,12:12:27.09:600,27,0	1/1:1,10:11:27.09:599,27,0	0/0:31,0:31:93.28:0,93,2653	1/1:1,12:13:30.10:666,30,0	1/1:0,16:16:30.10:667,30,0	0/0:28,0:27:78.27:0,78,2441	0/0:20,0:20:60.21:0,60,1817	0/0:17,0:17:48.16:0,48,1501	0/0:38,0:38:99:0,114,3184	1/1:0,19:19:48.12:1019,48,0	0/0:14,0:14:39.13:0,39,1188	0/0:35,0:35:99:0,105,3323	0/0:12,0:12:36.12:0,36,1025	0/0:28,0:28:84.29:0,84,2590	0/0:22,0:22:60.21:0,60,1789	0/0:12,0:12:36.12:0,36,1028
chr10	37859005	.	A	ACTC	7464.77	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-14.992;DP=771;FS=0.771;HRun=0;HaplotypeScore=131.5540;InbreedingCoeff=0.9981;MQ=65.93;MQ0=1;MQRankSum=-2.748;QD=41.94;ReadPosRankSum=2.856;VQSLOD=6.1228;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,114,1579	0/0:17,0:17:36.12:0,36,533	0/0:25,0:23:35.72:0,36,431	0/0:22,0:18:23.99:0,24,316	1/1:1,18:20:48.16:943,48,0	0/0:26,0:26:63.18:0,63,886	0/0:36,0:36:96.31:0,96,1399	0/0:30,0:30:60.17:0,60,802	1/1:4,21:26:57.20:1175,57,0	0/0:35,0:35:87.28:0,87,1251	0/0:23,0:23:57.18:0,57,808	0/0:34,0:34:81.25:0,81,1176	1/1:2,26:29:62.95:1311,63,0	1/1:2,17:19:33.11:687,33,0	0/0:23,0:23:60.19:0,60,864	1/1:2,24:26:48.16:999,48,0	1/1:4,21:26:51.18:1047,51,0	0/0:21,0:21:48.16:0,48,711	0/0:30,0:30:60.18:0,60,834	0/0:23,0:23:50.86:0,51,645	0/0:44,0:44:99:0,105,1517	1/1:5,25:32:66.16:1303,66,0	0/0:29,0:29:57.18:0,57,824	0/0:48,0:48:99:0,126,1842	0/0:25,0:25:69.22:0,69,1002	0/0:27,0:27:66.21:0,66,962	0/0:25,0:25:63.63:0,64,865	0/0:7,0:7:18.06:0,18,265
chr10	37859975	.	G	GCCTGAGCATC	25144.84	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-8.361;DP=691;FS=1.990;HRun=0;HaplotypeScore=186.5343;InbreedingCoeff=0.9604;MQ=81.90;MQ0=0;MQRankSum=-16.805;QD=75.51;ReadPosRankSum=-4.436;VQSLOD=4.1547;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,126,3806	1/1:5,3:10:6.02:304,6,0	0/0:26,0:26:39.11:0,39,1055	0/0:22,0:22:35.66:0,36,759	0/0:23,0:23:57.20:0,57,1679	1/1:10,14:27:57.20:2837,57,0	1/1:17,11:30:42.14:1985,42,0	1/1:26,0:26:30.09:982,30,0	0/0:34,0:34:81.28:0,81,2462	1/1:16,13:31:60.18:2760,60,0	1/1:5,7:13:21.07:1062,21,0	0/0:30,0:30:72.21:0,72,1912	0/0:30,0:30:72.23:0,72,2126	0/0:28,0:28:66.23:0,66,1970	1/1:15,10:27:51.18:2442,51,0	0/0:18,0:18:42.14:0,42,1276	0/0:26,0:26:54.16:0,54,1591	1/1:11,10:21:30.10:1409,30,0	1/1:8,4:13:27.04:922,27,0	1/1:7,13:21:45.15:2266,45,0	1/1:24,8:34:24.08:1108,24,0	0/0:28,0:28:75.21:0,75,2061	0/0:17,0:17:42.14:0,42,1276	0/0:21,0:21:54.18:0,54,1584	1/1:12,18:32:54.14:2561,54,0	1/1:19,13:32:72.25:3250,72,0	1/1:5,8:13:24.08:1106,24,0	1/1:2,0:2:3.01:151,3,0
chr10	37861288	.	A	AAC	1748.71	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.710;DP=676;FS=0.665;HRun=0;HaplotypeScore=86.3899;InbreedingCoeff=0.9806;MQ=86.77;MQ0=0;MQRankSum=-2.035;QD=52.99;ReadPosRankSum=0.944;VQSLOD=3.8718;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,144,2321	0/0:11,0:11:33.11:0,33,538	0/0:27,0:27:66.59:0,67,929	0/0:20,0:20:33.39:0,33,622	0/0:17,0:17:51.16:0,51,800	0/0:16,0:16:48.16:0,48,783	0/0:22,0:22:66.23:0,66,1074	0/0:17,0:17:51.15:0,51,781	0/0:25,0:25:75.24:0,75,1188	0/0:38,0:38:99:0,111,1781	0/0:20,0:20:60.19:0,60,948	0/0:31,0:31:90.28:0,90,1403	0/0:25,0:25:75.24:0,75,1190	0/0:18,0:18:54.18:0,54,878	0/0:34,0:34:96.33:0,96,1559	0/0:20,0:20:57.19:0,57,922	0/0:40,0:40:99:0,120,1921	0/0:14,0:14:42.14:0,42,664	0/0:21,0:21:60.20:0,60,970	0/0:26,0:26:75.24:0,75,1194	0/0:36,0:36:99:0,108,1751	0/0:18,0:18:54.18:0,54,876	0/0:20,0:20:60.20:0,60,969	0/0:31,0:31:93.29:0,93,1469	0/0:20,0:20:60.18:0,60,950	1/1:2,17:20:11.25:1073,11,0	0/0:28,0:28:84.29:0,84,1348	1/1:0,13:13:39.13:792,39,0
chr10	37861439	.	G	GT	21419.49	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-8.598;DP=685;FS=13.202;HRun=6;HaplotypeScore=58.5668;InbreedingCoeff=0.9917;MQ=82.17;MQ0=1;MQRankSum=-9.202;QD=33.63;ReadPosRankSum=6.484;VQSLOD=3.1929;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,36:38:99:1235,99,0	1/1:1,5:6:15.05:189,15,0	0/0:29,0:28:54.97:0,55,583	0/0:19,0:18:39.08:0,39,395	1/1:3,32:35:90.29:1132,90,0	1/1:2,19:21:57.18:717,57,0	1/1:3,13:16:39.12:491,39,0	1/1:1,21:22:63.17:765,63,0	1/1:3,27:30:75.24:943,75,0	1/1:2,32:34:96.31:1208,96,0	1/1:2,26:28:78.16:938,78,0	1/1:4,27:31:78.25:979,78,0	1/1:2,27:29:84.27:1056,84,0	1/1:1,19:20:51.16:642,51,0	1/1:0,28:28:84.27:1057,84,0	1/1:0,23:23:63.20:793,63,0	1/1:0,23:23:62.95:792,63,0	1/1:2,18:20:51.16:641,51,0	1/1:3,17:20:51.12:613,51,0	1/1:1,32:33:93.21:1134,93,0	1/1:3,17:20:48.15:604,48,0	1/1:0,15:15:45.14:566,45,0	1/1:0,21:21:63.20:793,63,0	1/1:1,11:12:33.11:415,33,0	1/1:4,26:30:75.24:944,75,0	1/1:1,32:33:96.29:1191,96,0	1/1:3,26:29:72.23:906,72,0	1/1:2,18:20:54.17:679,54,0
chr10	37862298	.	A	AG	786.39	PASS	AB=0.581;AC=3;AF=0.054;AN=56;BaseQRankSum=-4.842;DP=553;FS=1.557;HRun=7;HaplotypeScore=62.9155;InbreedingCoeff=0.6312;MQ=82.01;MQ0=0;MQRankSum=-2.343;QD=21.84;ReadPosRankSum=0.735;VQSLOD=3.3719;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,108,1041	0/0:6,0:6:18.02:0,18,168	0/0:17,0:17:27.25:0,27,329	0/0:21,0:21:45.03:0,45,424	0/0:14,0:14:33.05:0,33,318	0/0:32,0:32:87.13:0,87,837	0/0:24,0:24:66.04:0,66,621	0/0:17,0:17:36.05:0,36,344	0/0:12,0:12:27.03:0,27,261	0/0:10,0:10:9:0,9,87	0/0:13,0:13:27.03:0,27,261	0/0:25,0:25:57.08:0,57,550	0/0:13,0:13:36.06:0,36,348	0/0:18,0:18:48.07:0,48,463	0/0:23,0:23:60.07:0,60,572	0/0:15,0:15:42.07:0,42,405	0/0:33,0:33:93.14:0,93,898	0/0:26,0:26:75.02:0,75,705	0/0:23,0:23:56.91:0,57,519	0/0:11,0:11:27.04:0,27,260	0/0:42,0:42:96.12:0,96,920	0/0:12,0:12:27.04:0,27,261	0/0:9,0:9:18.03:0,18,174	0/0:27,0:27:69.05:0,69,665	0/0:7,0:7:18.02:0,18,173	0/1:5,13:18:12.78:413,0,13	0/0:23,0:23:60.05:0,60,571	1/1:6,12:18:42.07:479,42,0
chr10	37863376	.	A	ATGTGTGTGTGTGTGTGTGTG	3738.75	PASS	AB=1.000;AC=33;AF=0.750;AN=44;BaseQRankSum=0.240;DP=315;FS=7.889;HRun=0;HaplotypeScore=132.6573;InbreedingCoeff=-0.0014;MQ=41.83;MQ0=45;MQRankSum=0.466;QD=15.14;ReadPosRankSum=-2.018;VQSLOD=1.4825;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:25:29.39:29,0,174	./.	0/0:27,0:5:2.15:0,2,43	0/1:25,0:8:2.73:3,0,42	./.	1/1:1,4:7:3.01:280,3,0	1/1:17,0:17:35.87:987,36,0	1/1:13,0:10:26.43:344,26,0	0/1:8,0:8:5.96:126,0,6	1/1:10,0:8:17.93:253,18,0	./.	1/1:1,1:7:3.01:263,3,0	0/1:11,0:11:32.11:32,0,81	0/1:12,0:10:4.96:177,0,5	1/1:9,0:10:11.97:299,12,0	0/0:11,0:9:0.33:0,0,131	0/1:23,0:23:99:130,0,296	1/1:6,0:6:10.33:93,10,0	1/1:7,0:5:11.53:282,12,0	1/1:5,0:5:11.91:97,12,0	1/1:20,0:20:14.88:109,15,0	./.	./.	1/1:15,0:14:11.98:99,12,0	1/1:7,0:4:2.96:19,3,0	0/1:9,0:8:42.63:43,0,112	1/1:9,0:9:11.75:73,12,0	./.
chr10	37863377	.	C	CGTGTGTGTGT	3048.22	PASS	AB=0.786;AC=35;AF=0.972;AN=36;BaseQRankSum=-1.094;DP=337;FS=0.000;HRun=0;HaplotypeScore=98.4381;InbreedingCoeff=-0.1467;MQ=40.67;MQ0=49;MQRankSum=-0.365;QD=13.31;ReadPosRankSum=-1.733;VQSLOD=1.9185;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:28:5.97:103,6,0	./.	./.	./.	./.	1/1:6,0:5:3.01:131,3,0	1/1:19,0:18:9:132,9,0	1/1:15,0:9:6.02:126,6,0	1/1:7,1:8:9.03:293,9,0	1/1:11,0:9:9.03:295,9,0	./.	1/1:8,0:7:3.01:131,3,0	1/1:11,0:11:3.01:71,3,0	1/1:7,6:13:9.03:446,9,0	1/1:12,0:12:12.04:365,12,0	0/1:8,0:9:23.54:85,0,24	1/1:23,0:23:12.02:278,12,0	1/1:7,0:7:3.01:131,3,0	1/1:8,0:6:3.01:44,3,0	1/1:5,0:5:3.01:57,3,0	1/1:23,0:22:9.02:161,9,0	./.	./.	./.	./.	1/1:9,0:8:3.01:113,3,0	1/1:10,0:10:6.02:171,6,0	./.
chr10	37865027	.	C	CGTGTGTGTGT	738.22	PASS	AC=10;AF=1.00;AN=10;DP=81;FS=0.000;HRun=0;HaplotypeScore=32.7407;MQ=14.68;MQ0=47;QD=41.01;VQSLOD=2.8634;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	1/1:1,4:5:6.02:300,6,0	./.	./.	./.	./.	./.	1/1:3,0:1:3.01:115,3,0	./.	./.	./.	./.	./.	./.	./.	./.	1/1:4,0:3:3.01:120,3,0	./.	1/1:2,2:3:3.01:150,3,0	./.	./.	./.	./.	./.	1/1:2,0:1:3.01:121,3,0
chr10	37865463	.	A	AGT	2347.15	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-6.515;DP=867;FS=2.764;HRun=0;HaplotypeScore=121.0147;InbreedingCoeff=0.9988;MQ=57.97;MQ0=6;MQRankSum=3.055;QD=37.26;ReadPosRankSum=0.370;VQSLOD=5.3508;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:49:99:0,129,1795	0/0:11,0:11:33.10:0,33,451	0/0:33,0:27:75.20:0,75,936	0/0:36,0:25:52.55:0,53,729	0/0:25,0:25:75.25:0,75,1069	0/0:27,0:27:63.21:0,63,890	0/0:27,0:27:78.11:0,78,1043	0/0:33,0:32:87.27:0,87,1197	0/0:37,0:37:99:0,105,1498	0/0:40,0:40:99:0,117,1599	0/0:21,0:21:57.18:0,57,793	0/0:31,0:31:93.26:0,93,1254	0/0:36,0:36:99:0,102,1447	0/0:32,0:32:87.29:0,87,1234	0/0:32,0:32:93.31:0,93,1325	0/0:29,0:29:75.25:0,75,1071	0/0:31,0:30:84.13:0,84,1093	0/0:26,0:26:78.23:0,78,1075	0/0:24,0:24:69.18:0,69,898	0/0:20,0:20:60.15:0,60,781	0/0:69,0:69:99:0,195,2623	0/0:29,0:29:84.27:0,84,1177	0/0:23,0:23:63.17:0,63,875	0/0:32,0:32:87.24:0,87,1186	0/0:19,0:15:45.14:0,45,627	1/1:2,42:46:45.95:2029,46,0	0/0:29,0:29:84.27:0,84,1177	1/1:0,16:16:24.08:439,24,0
chr10	37865676	.	A	AGT	1675.12	PASS	AB=0.713;AC=2;AF=0.036;AN=56;BaseQRankSum=-2.329;DP=1086;FS=5.810;HRun=0;HaplotypeScore=159.9651;InbreedingCoeff=-0.0371;MQ=57.19;MQ0=18;MQRankSum=0.795;QD=24.28;ReadPosRankSum=2.031;VQSLOD=4.5489;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:50:99:0,129,1636	0/0:17,0:17:45.15:0,45,587	0/0:37,0:13:24.08:0,24,315	0/0:42,0:22:39.11:0,39,492	0/0:27,0:27:68.96:0,69,860	0/0:21,0:21:48.16:0,48,628	0/0:38,0:38:91.18:0,91,1170	0/0:45,1:43:66.01:0,66,1406	0/0:55,0:55:99:0,146,1895	0/0:40,0:37:93.30:0,93,1217	0/0:20,0:18:39.13:0,39,512	0/0:46,0:46:99:0,126,1624	0/0:42,0:42:99:0,114,1481	0/0:46,0:45:99:0,114,1462	0/0:63,1:64:99:0,160,2073	0/0:39,0:39:99:0,102,1324	0/0:49,0:49:99:0,124,1552	0/0:25,0:24:60.17:0,60,763	0/0:27,0:23:54.17:0,54,697	0/0:18,0:18:54.12:0,54,671	0/0:91,0:89:99:0,211,2719	0/0:39,0:39:90.29:0,90,1180	0/0:30,0:30:78.25:0,78,1023	0/0:53,1:54:99:0,117,1537	0/0:21,0:19:45.06:0,45,551	0/1:25,23:47:99:1389,0,274	0/0:32,0:32:84.26:0,84,1088	0/1:14,7:21:99:375,0,213
chr10	37865730	.	AGT	A	2022.55	PASS	AB=0.743;AC=3;AF=0.058;AN=52;BaseQRankSum=10.545;DP=1140;FS=19.774;HRun=0;HaplotypeScore=140.9244;InbreedingCoeff=-0.0596;MQ=48.96;MQ0=106;MQRankSum=-1.071;QD=12.64;ReadPosRankSum=2.985;VQSLOD=1.8001;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:60,1:49:99:0,106,1891	0/0:13,0:12:36.11:0,36,591	./.	./.	0/0:28,0:23:63.20:0,63,1030	0/0:17,0:15:42.13:0,42,692	0/1:37,1:13:6.25:6,0,202	0/0:48,0:6:8.75:0,9,88	0/0:48,0:46:99:0,123,2036	0/0:50,0:25:69.23:0,69,1149	0/0:23,0:18:51.14:0,51,812	0/0:39,0:34:93.23:0,93,1426	0/0:46,0:42:99:0,114,1874	0/0:44,0:41:99:0,99,1655	0/0:56,1:45:99:0,108,1840	0/0:48,0:46:99:0,123,2099	0/0:44,1:43:98.23:0,98,1730	0/0:30,0:25:46.49:0,46,964	0/0:25,0:13:33.10:0,33,509	0/0:28,0:23:66.23:0,66,1131	0/0:101,2:85:99:0,199,3667	0/0:39,0:30:81.25:0,81,1312	0/0:26,0:22:48.16:0,48,796	0/0:54,0:51:99:0,123,2025	0/0:21,0:19:50.76:0,51,847	0/1:38,49:71:99:1487,0,633	0/0:22,0:17:51.16:0,51,822	0/1:13,22:32:99:622,0,253
chr10	37868438	.	A	AG	1653.33	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.898;DP=552;FS=5.800;HRun=0;HaplotypeScore=54.1596;InbreedingCoeff=0.9075;MQ=75.63;MQ0=0;MQRankSum=0.220;QD=40.33;ReadPosRankSum=0.587;VQSLOD=3.9566;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,108,1457	0/0:9,0:9:27.07:0,27,347	0/0:18,0:18:50.81:0,51,623	0/0:5,0:5:2.32:0,2,115	0/0:29,0:29:84.28:0,84,1172	0/0:22,0:22:63.21:0,63,880	0/0:21,0:21:60.19:0,60,821	0/0:32,0:32:96.29:0,96,1273	0/0:18,0:18:51.15:0,51,694	0/0:23,0:23:66.21:0,66,897	0/0:16,0:16:45.15:0,45,625	0/0:16,0:16:48.15:0,48,653	0/0:15,0:15:39.13:0,39,545	0/0:16,0:16:48.15:0,48,656	0/0:21,0:21:60.16:0,60,788	0/0:15,0:15:45.15:0,45,629	0/0:24,0:24:72.23:0,72,989	0/0:31,0:31:87.27:0,87,1197	0/0:16,0:16:48.15:0,48,655	0/0:21,0:21:60.16:0,60,816	0/0:14,0:14:42.14:0,42,587	0/0:13,0:13:36.12:0,36,502	0/0:18,0:18:54.18:0,54,754	0/0:12,0:12:36.11:0,36,487	0/0:15,0:15:45.14:0,45,599	1/1:1,29:30:48.37:1272,48,0	0/0:34,0:34:96.23:0,96,1266	1/1:0,11:11:33.11:503,33,0
chr10	37868668	.	TACA	T	1062.52	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.551;DP=540;FS=1.688;HRun=0;HaplotypeScore=73.5078;InbreedingCoeff=0.9421;MQ=74.72;MQ0=0;MQRankSum=-0.360;QD=42.50;ReadPosRankSum=0.467;VQSLOD=4.5629;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:84.29:0,84,1902	0/0:8,0:8:24.08:0,24,539	0/0:17,0:17:48.16:0,48,1001	0/0:13,0:13:30.08:0,30,581	0/0:24,0:24:72.23:0,72,1552	0/0:21,0:21:63.22:0,63,1391	0/0:29,0:29:84.25:0,84,1816	0/0:28,0:28:72.19:0,72,1542	0/0:20,0:20:60.20:0,60,1283	0/0:16,0:16:42.14:0,42,939	0/0:14,0:14:39.13:0,39,850	0/0:14,0:14:42.14:0,42,951	0/0:15,0:15:45.15:0,45,1019	0/0:16,0:16:48.16:0,48,1047	0/0:14,0:14:42.14:0,42,933	0/0:12,0:11:36.12:0,36,795	0/0:39,0:38:99:0,117,2559	0/0:18,0:18:54.19:0,54,1190	0/0:20,0:20:57.20:0,57,1288	0/0:24,0:24:66.21:0,66,1449	0/0:23,0:23:63.22:0,63,1421	0/0:15,0:15:45.15:0,45,1000	0/0:18,0:18:51.18:0,51,1138	0/0:19,0:19:51.18:0,51,1135	0/0:19,0:19:54.18:0,54,1148	1/1:0,22:22:66.22:1074,66,0	0/0:31,0:31:84.28:0,84,1825	1/1:0,3:3:6.02:100,6,0
chr10	37869178	.	CT	C	882.05	PASS	AB=0.893;AC=7;AF=0.125;AN=56;BaseQRankSum=7.383;DP=648;FS=0.520;HRun=11;HaplotypeScore=64.7614;InbreedingCoeff=0.5304;MQ=65.37;MQ0=1;MQRankSum=-0.632;QD=8.32;ReadPosRankSum=0.656;VQSLOD=2.2606;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:70.70:0,71,706	0/1:6,1:9:3.77:4,0,146	0/0:11,0:9:18.34:0,18,153	0/1:14,2:16:12.80:13,0,80	0/0:20,1:21:35.50:0,35,576	0/0:20,0:22:59.98:0,60,616	0/0:26,1:29:68.80:0,69,676	0/0:37,1:36:58.07:0,58,795	0/0:18,0:18:45.11:0,45,480	0/0:35,0:35:90.23:0,90,959	0/0:14,0:14:33.08:0,33,352	0/0:20,0:20:57.11:0,57,587	0/0:14,0:14:36.07:0,36,373	0/0:16,0:16:42.10:0,42,446	0/1:21,3:24:16.79:17,0,454	0/0:26,0:25:72.16:0,72,757	0/0:33,0:33:84.21:0,84,896	0/0:19,1:20:26.48:0,26,485	0/0:28,1:28:39.57:0,40,570	0/0:21,3:25:7.51:0,8,554	0/0:22,0:22:42.11:0,42,447	0/0:22,0:23:62.99:0,63,654	0/0:23,0:23:57.13:0,57,600	0/0:19,0:19:51.08:0,51,525	0/0:27,0:29:68.84:0,69,674	1/1:7,29:36:62.84:666,63,0	0/0:20,2:25:22.76:0,23,520	1/1:0,21:21:38.96:320,39,0
chr10	37870447	.	GCC	G	475.72	PASS	AB=0.710;AC=2;AF=0.036;AN=56;BaseQRankSum=1.847;DP=506;FS=0.962;HRun=2;HaplotypeScore=115.3114;InbreedingCoeff=-0.0427;MQ=51.87;MQ0=19;MQRankSum=-1.200;QD=19.03;ReadPosRankSum=1.391;VQSLOD=1.5051;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:41.96:0,42,638	0/0:9,0:9:27.03:0,27,399	0/0:29,0:12:31.28:0,31,494	0/0:45,0:17:24.53:0,25,488	0/0:10,0:10:21.07:0,21,383	0/0:14,0:14:30.06:0,30,473	0/0:21,0:21:35.95:0,36,592	0/0:16,0:16:48.15:0,48,821	0/0:9,0:9:24.08:0,24,416	0/0:22,0:22:62.48:0,62,1000	0/0:7,0:7:11.91:0,12,196	0/0:20,0:20:54.18:0,54,931	0/0:19,1:19:54.18:0,54,890	0/0:13,0:13:20.99:0,21,329	0/0:16,0:16:36.05:0,36,488	0/0:15,0:15:39.13:0,39,653	0/0:30,1:31:54.55:0,55,1646	0/0:23,0:23:57.19:0,57,968	0/0:11,0:9:27.09:0,27,459	0/0:14,0:13:30.10:0,30,504	0/0:38,0:36:61.15:0,61,1006	0/0:10,0:10:27.09:0,27,466	0/0:3,0:3:5.98:0,6,64	0/0:27,2:26:57.10:0,57,879	0/0:16,0:16:42.10:0,42,671	0/1:11,7:18:99:362,0,330	0/0:11,0:11:33.07:0,33,505	0/1:4,3:7:94.99:202,0,95
chr10	37870465	.	GCCAGAGCC	G	760.80	PASS	AB=0.994;AC=22;AF=0.393;AN=56;BaseQRankSum=6.118;DP=580;FS=5.904;HRun=0;HaplotypeScore=186.5521;InbreedingCoeff=-0.4068;MQ=71.39;MQ0=20;MQRankSum=-1.172;QD=1.98;ReadPosRankSum=8.071;VQSLOD=0.8921;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:7,16:23:13.89:0,14,139	0/1:9,0:9:18.95:19,0,137	0/0:54,0:29:31.52:0,32,593	0/1:70,0:36:99:109,0,445	0/0:6,0:6:9.03:0,9,170	0/1:14,0:14:49.95:50,0,116	0/0:31,0:31:16.55:0,17,692	0/0:16,0:16:41.13:0,41,709	0/1:10,0:10:23.06:23,0,135	0/1:19,0:19:27.31:27,0,365	1/1:11,0:11:7.60:52,8,0	0/1:21,0:21:83.46:83,0,144	0/1:20,0:19:51.36:51,0,379	0/1:19,0:19:16.31:16,0,394	0/1:17,0:17:63.14:63,0,168	0/1:17,0:17:53.32:53,0,372	0/0:34,0:34:38.86:0,39,2931	0/1:25,0:25:66.50:66,0,271	0/1:10,0:8:16.34:16,0,224	0/1:9,0:8:20.02:20,0,87	0/1:39,0:38:62.22:62,0,425	0/1:9,0:9:36.01:36,0,164	1/1:4,0:4:2.03:6,2,0	0/1:27,0:23:48.78:49,0,320	0/1:10,0:10:32.06:60,0,32	0/0:21,0:21:46.89:0,47,1333	0/1:15,0:15:60.15:60,0,392	0/0:7,0:7:21.07:0,21,557
chr10	37870471	.	GCC	G	4253.80	PASS	AB=0.694;AC=23;AF=0.411;AN=56;BaseQRankSum=0.874;DP=574;FS=13.144;HRun=2;HaplotypeScore=129.9019;InbreedingCoeff=-0.4512;MQ=72.27;MQ0=22;MQRankSum=-0.359;QD=10.45;ReadPosRankSum=4.412;VQSLOD=0.5778;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:12.87:0,13,134	0/1:3,5:8:82.32:82,0,111	0/0:60,0:30:19.73:0,20,525	0/1:78,0:36:99:113,0,424	0/0:7,0:7:12.04:0,12,218	0/1:4,9:13:99:221,0,127	0/1:16,12:28:98.22:98,0,682	0/0:15,0:15:43.83:0,44,765	0/1:6,2:8:99:121,0,181	0/1:9,6:15:99:251,0,322	1/1:7,5:12:8.58:139,9,0	0/1:10,10:19:99:358,0,145	0/1:11,9:20:99:336,0,445	0/1:7,10:17:99:117,0,378	0/1:6,11:17:99:306,0,206	0/1:7,9:16:99:297,0,367	0/0:32,0:32:93.32:0,93,1808	0/1:9,15:24:99:378,0,312	0/1:8,1:7:84.49:84,0,201	0/1:6,3:8:97.57:125,0,98	0/1:16,25:40:99:339,0,459	0/1:6,3:9:99:147,0,202	1/1:5,0:5:3:36,3,0	0/1:12,12:21:99:240,0,269	0/1:3,9:12:75.67:221,0,76	0/0:20,0:20:27.31:0,27,945	0/1:9,6:15:99:245,0,392	0/0:8,0:8:24.08:0,24,440
chr10	37870473	.	CAGAGCGAGAG	C	3760.51	PASS	AB=0.778;AC=30;AF=0.600;AN=50;BaseQRankSum=1.275;DP=582;FS=3.322;HRun=0;HaplotypeScore=194.0892;InbreedingCoeff=0.7460;MQ=72.71;MQ0=23;MQRankSum=-0.345;QD=14.03;ReadPosRankSum=1.923;VQSLOD=2.7708;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	1/1:8,0:8:9.91:165,10,0	0/0:63,0:31:1.25:0,1,3	0/0:86,0:39:0.89:0,1,2	0/0:9,0:9:18.06:0,18,421	1/1:13,0:13:12.50:206,12,0	1/1:28,0:28:23.95:277,24,0	./.	0/0:8,0:8:12:0,12,239	1/1:7,8:15:24:442,24,0	./.	1/1:19,0:18:9.03:206,9,0	0/0:20,0:20:30.08:0,30,603	0/0:18,0:18:24.08:0,24,562	1/1:17,0:17:16.76:312,17,0	0/0:17,0:17:24.08:0,24,568	0/0:33,0:33:45.99:0,46,977	1/1:24,0:24:27.06:516,27,0	0/1:10,0:8:51:71,0,51	1/1:9,0:8:6.02:92,6,0	1/1:41,0:40:23.61:354,24,0	0/0:8,0:8:9.03:0,9,204	0/1:1,4:5:0.11:0,0,0	1/1:24,0:21:15.05:311,15,0	1/1:12,0:12:9.02:141,9,0	1/1:20,0:20:19.65:184,20,0	1/1:15,0:15:24.54:429,25,0	1/1:8,0:8:7.89:54,8,0
chr10	37870483	.	G	GCC	1627.76	PASS	AB=0.905;AC=16;AF=0.286;AN=56;BaseQRankSum=2.586;DP=584;FS=3.971;HRun=0;HaplotypeScore=142.0445;InbreedingCoeff=-0.3573;MQ=72.53;MQ0=19;MQRankSum=0.162;QD=6.19;ReadPosRankSum=-1.716;VQSLOD=3.1054;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:25:5.61:0,6,97	0/1:7,0:7:16.08:16,0,43	0/0:57,0:30:53.71:0,54,727	0/0:80,0:39:32.34:0,32,650	0/0:8,0:8:21.07:0,21,343	0/1:10,1:11:46.10:46,0,236	0/1:30,1:30:99:108,0,583	0/0:22,0:16:48.16:0,48,747	0/0:10,0:10:21.07:0,21,339	0/1:15,0:15:99:237,0,276	0/0:12,0:12:5.61:0,6,88	0/1:12,8:19:99:198,0,300	0/0:22,0:21:51.17:0,51,824	0/0:19,0:19:39.09:0,39,631	0/1:15,2:17:99:124,0,305	0/0:17,0:17:45.13:0,45,690	0/0:38,1:37:99:0,100,1579	0/1:21,2:22:99:148,0,357	0/1:10,1:8:37.03:37,0,244	0/1:8,1:8:66.15:66,0,123	0/1:39,3:42:99:132,0,679	0/0:8,0:8:24.08:0,24,380	0/1:4,0:4:0:0,0,0	0/1:22,4:22:99:155,0,261	0/1:10,0:9:21.05:21,0,219	0/1:13,4:17:99:198,0,239	0/1:11,2:13:99:190,0,208	0/1:5,2:7:99:105,0,128
chr10	37870498	.	CGAGA	C	571.73	PASS	AB=0.756;AC=3;AF=0.054;AN=56;BaseQRankSum=3.671;DP=565;FS=24.721;HRun=0;HaplotypeScore=142.8198;InbreedingCoeff=0.0210;MQ=69.04;MQ0=29;MQRankSum=-1.756;QD=8.41;ReadPosRankSum=2.866;VQSLOD=1.4138;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:23:8.62:0,9,133	0/0:6,0:6:14.46:0,14,260	0/1:47,0:22:1.93:2,0,153	0/0:76,0:39:12.29:0,12,365	0/0:8,0:8:21.07:0,21,540	0/0:14,0:14:28.71:0,29,471	0/0:31,0:30:57.32:0,57,975	0/0:26,0:18:45.13:0,45,808	0/0:13,0:12:21.07:0,21,504	0/0:14,0:13:1.41:0,1,353	0/0:11,0:11:3:0,3,25	0/0:19,0:18:35.73:0,36,435	0/0:23,0:22:57.14:0,57,1296	0/0:18,0:18:45.15:0,45,1063	0/0:15,0:15:15.09:0,15,384	0/0:16,0:16:39.11:0,39,851	0/0:39,0:36:99:0,99,2238	0/0:18,0:17:16.82:0,17,359	0/0:8,0:4:11.87:0,12,202	0/0:10,0:9:21.07:0,21,433	0/0:40,0:38:56.26:0,56,916	0/0:8,0:8:21.07:0,21,470	0/0:5,0:5:3.01:0,3,69	0/0:23,0:19:25.38:0,25,375	0/0:12,0:10:5.41:0,5,303	0/1:5,10:14:45.61:466,0,46	0/0:16,0:15:33.41:0,33,440	0/1:3,3:6:5.43:194,0,5
chr10	37870522	.	A	AGC	359.37	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=5.877;DP=630;FS=0.000;HRun=0;HaplotypeScore=147.2807;InbreedingCoeff=0.6093;MQ=62.78;MQ0=37;MQRankSum=-1.632;QD=15.62;ReadPosRankSum=-0.625;VQSLOD=3.5326;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:28:21.51:0,22,319	0/1:6,0:6:33.21:33,0,78	0/0:67,0:27:22.29:0,22,307	0/0:91,0:40:45.97:0,46,538	0/0:12,0:11:24.08:0,24,367	0/0:16,0:15:27.03:0,27,332	0/0:28,0:27:66.52:0,67,807	0/0:25,0:16:48.11:0,48,688	0/0:22,0:21:42.60:0,43,621	0/0:16,0:14:38.55:0,39,394	0/0:12,0:12:5.72:0,6,91	0/0:18,0:15:27.06:0,27,377	0/0:22,0:21:50.77:0,51,747	0/0:17,0:16:40:0,40,578	0/0:13,0:12:14.86:0,15,121	0/0:22,0:22:51.64:0,52,779	0/0:37,0:34:89.08:0,89,1289	0/0:20,0:19:12.35:0,12,218	0/0:15,0:8:14.99:0,15,213	0/0:12,0:12:17.55:0,18,296	0/0:36,0:31:41.59:0,42,587	0/0:11,0:11:24.06:0,24,326	0/0:9,0:9:2.92:0,3,46	0/0:23,0:18:25.41:0,25,302	0/0:9,0:8:6.24:0,6,103	1/1:9,3:12:20.66:296,21,0	0/0:18,0:16:23.30:0,23,409	1/1:1,3:4:9.03:152,9,0
chr10	37870526	.	A	AGC	1500.36	PASS	AB=0.934;AC=17;AF=0.304;AN=56;BaseQRankSum=0.603;DP=651;FS=0.000;HRun=0;HaplotypeScore=146.4798;InbreedingCoeff=-0.1411;MQ=63.32;MQ0=33;MQRankSum=2.648;QD=6.03;ReadPosRankSum=-0.538;VQSLOD=3.0693;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:28:21.54:0,22,290	0/1:5,1:6:69.36:123,0,69	0/0:76,0:30:17.96:0,18,230	0/0:100,0:41:72.79:0,73,530	0/0:12,0:11:24.08:0,24,343	0/1:15,1:15:34.17:34,0,91	0/1:32,0:31:99:177,0,315	0/0:25,0:18:28.12:0,28,514	0/0:22,0:21:43.03:0,43,561	0/1:17,0:15:87.22:179,0,87	0/0:12,0:12:4.26:0,4,36	0/1:18,0:15:10.01:10,0,200	0/0:25,0:24:50.38:0,50,655	0/0:19,0:18:42.57:0,43,546	1/1:9,3:11:17.81:173,18,0	0/0:24,0:24:51.64:0,52,728	0/0:33,0:31:82.07:0,82,1092	0/1:13,6:18:17.42:332,0,17	0/1:15,1:11:26.04:26,0,157	0/1:12,0:12:29.24:29,0,179	0/1:34,1:30:79.41:79,0,251	0/0:11,0:11:21.06:0,21,282	0/0:9,0:9:2.92:0,3,43	0/1:18,5:18:99:130,0,126	0/1:8,1:8:34.71:120,0,35	0/1:13,0:12:26.40:26,0,109	0/1:16,1:15:72.94:190,0,73	1/1:4,0:4:7.80:37,8,0
chr10	37870534	.	AGAGC	A	2461.73	PASS	AB=0.943;AC=18;AF=0.321;AN=56;BaseQRankSum=1.892;DP=671;FS=6.597;HRun=0;HaplotypeScore=157.6342;InbreedingCoeff=-0.0231;MQ=64.75;MQ0=34;MQRankSum=2.005;QD=10.26;ReadPosRankSum=-1.563;VQSLOD=2.5744;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:27:20.98:0,21,304	0/1:4,2:6:26.18:133,0,26	0/0:85,0:33:20:0,20,221	0/0:114,0:43:19.43:0,19,395	0/0:14,0:13:23.88:0,24,522	0/1:16,1:16:63.98:132,0,64	0/1:25,0:24:92.48:130,0,92	0/0:20,0:18:47.42:0,47,577	0/0:23,0:22:38.79:0,39,715	0/1:20,0:18:92.96:249,0,93	0/0:12,0:12:5.23:0,5,26	0/1:19,0:16:30.84:145,0,31	0/0:28,0:27:32.53:0,33,780	0/0:20,0:19:42.10:0,42,813	1/1:11,0:10:14.79:227,15,0	0/0:25,0:25:53.71:0,54,1121	0/0:37,0:33:64.77:0,65,1525	1/1:19,2:20:13.32:481,13,0	0/1:15,0:11:75.23:75,0,121	0/1:12,1:13:46.69:47,0,102	0/1:30,2:27:99:111,0,164	0/0:12,0:12:21.07:0,21,426	0/0:10,0:10:2.51:0,3,18	0/1:23,0:18:6.38:281,0,6	0/1:8,1:8:23.25:179,0,23	0/1:9,0:8:16.53:99,0,17	0/1:15,3:16:8.18:328,0,8	1/1:2,0:2:2.84:14,3,0
chr10	37870558	.	CGAGAGA	C	2020.23	PASS	AB=0.992;AC=28;AF=0.500;AN=56;BaseQRankSum=-3.623;DP=629;FS=20.277;HRun=0;HaplotypeScore=173.2190;InbreedingCoeff=0.0058;MQ=55.89;MQ0=63;MQRankSum=0.509;QD=5.26;ReadPosRankSum=0.169;VQSLOD=1.5501;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:22:5.71:6,0,205	1/1:5,0:5:5.58:32,6,0	0/0:63,0:15:5.79:0,6,30	0/0:95,0:24:1.64:0,2,19	0/1:17,0:17:9.98:10,0,16	1/1:21,0:19:13.28:210,13,0	0/0:21,0:21:12.52:0,13,86	0/1:25,0:15:15.38:41,0,15	0/1:28,0:26:47.39:169,0,47	1/1:16,0:15:33.53:340,34,0	1/1:11,1:12:5.54:71,6,0	0/0:23,0:20:2.02:0,2,78	0/1:28,0:26:51.41:164,0,51	0/1:20,0:18:50.65:73,0,51	1/1:10,0:9:2.93:50,3,0	0/1:24,0:24:12.08:12,0,39	0/1:31,0:27:47.64:220,0,48	0/1:20,0:19:18.61:241,0,19	0/1:13,0:12:21.79:90,0,22	1/1:13,1:14:13.46:89,13,0	1/1:29,0:25:6.11:37,6,0	0/1:14,0:15:24.13:24,0,32	0/0:10,0:10:2.83:0,3,25	0/0:19,0:15:13.08:0,13,63	0/1:8,1:8:4.02:80,0,4	0/0:8,0:7:17.94:0,18,200	1/1:20,1:19:23.29:233,23,0	0/0:5,0:4:8.92:0,9,76
chr10	37870562	.	A	AGC	1163.28	PASS	AB=0.955;AC=23;AF=0.411;AN=56;BaseQRankSum=-4.041;DP=599;FS=8.975;HRun=0;HaplotypeScore=153.8269;InbreedingCoeff=0.1271;MQ=55.05;MQ0=66;MQRankSum=3.645;QD=3.75;ReadPosRankSum=-1.693;VQSLOD=1.9477;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:23:8.69:0,9,145	0/1:4,1:5:23.10:23,0,26	0/1:55,0:13:1.10:2,0,1	0/0:84,0:19:4.02:0,4,44	0/0:17,0:17:8.86:0,9,122	0/1:20,0:18:19.35:84,0,19	1/1:21,0:21:16.80:174,17,0	0/1:25,0:13:4.60:101,0,5	0/0:31,0:28:36.29:0,36,397	1/1:15,0:14:2.51:203,3,0	1/1:9,0:9:5.98:56,6,0	0/1:21,0:18:23.66:124,0,24	0/0:26,0:24:40.53:0,41,358	0/0:19,0:17:21.50:0,21,239	1/1:10,0:9:5.66:46,6,0	0/0:22,0:22:37.40:0,37,472	0/0:29,0:25:55.14:0,55,558	0/1:18,2:19:84.14:84,0,146	0/1:11,0:10:42.86:47,0,43	0/1:13,1:14:7.02:89,0,7	0/1:25,2:23:14.26:50,0,14	0/0:16,0:16:20.47:0,20,229	1/1:10,0:10:2.86:20,3,0	0/1:20,0:15:8.87:80,0,9	1/1:8,1:8:7.19:48,7,0	0/0:10,0:9:20.72:0,21,100	0/1:16,2:16:71.83:105,0,72	0/0:6,0:5:6.26:0,6,19
chr10	37870576	.	CGA	C	314.26	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=1.244;DP=545;FS=3.444;HRun=0;HaplotypeScore=153.6541;InbreedingCoeff=0.0338;MQ=42.26;MQ0=62;MQRankSum=-0.740;QD=1.26;ReadPosRankSum=-0.560;VQSLOD=2.2914;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:22:15.04:0,15,177	0/0:4,0:4:5.64:0,6,59	0/0:28,0:5:1.55:0,2,14	0/0:54,2:7:8.96:0,9,68	0/0:19,0:18:2.90:0,3,34	0/1:20,0:19:9.91:10,0,18	0/0:22,0:22:17.89:0,18,156	0/0:32,0:17:6.63:0,7,72	0/1:28,0:25:10.04:10,0,200	0/1:17,0:15:19.81:20,0,84	0/0:7,0:7:2.94:0,3,23	0/1:20,0:17:25.79:56,0,26	0/1:25,0:24:39.84:40,0,95	0/1:17,0:15:7.06:7,0,81	0/0:13,0:12:3.97:0,4,28	0/1:21,0:21:7.15:7,0,294	0/1:30,0:26:16.13:16,0,241	0/0:21,0:19:13.61:0,14,227	1/1:7,0:7:7.80:53,8,0	0/0:13,0:13:6.01:0,6,66	0/0:22,0:18:2.98:0,3,22	0/1:19,0:18:23.25:23,0,102	1/1:10,0:10:2.83:21,3,0	1/1:19,0:14:8.06:56,8,0	0/0:13,0:12:11.13:0,11,105	1/1:5,3:8:2.66:94,3,0	0/0:18,0:16:0.23:0,0,218	1/1:6,2:6:9.43:58,9,0
chr10	37870582	.	AGAGAGAGAGAGC	A	2366.31	PASS	AB=1.000;AC=32;AF=0.571;AN=56;BaseQRankSum=-4.924;DP=562;FS=4.301;HRun=0;HaplotypeScore=196.1999;InbreedingCoeff=0.5265;MQ=42.46;MQ0=65;MQRankSum=-1.836;QD=7.86;ReadPosRankSum=-4.905;VQSLOD=1.1492;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:23:4.46:4,0,220	1/1:5,0:4:7.53:78,8,0	0/0:33,0:4:4.96:0,5,44	0/0:59,0:9:8.80:0,9,56	0/0:21,0:20:3.22:0,3,70	1/1:21,0:20:19.17:212,19,0	1/1:28,0:27:30.23:370,30,0	1/1:20,15:20:39.01:399,39,0	0/0:27,0:24:23.39:0,23,331	1/1:16,0:14:16.36:274,16,0	1/1:7,0:7:2.33:24,2,0	0/1:18,0:15:56.80:57,0,64	0/0:23,0:22:5.22:0,5,146	0/0:18,0:16:11.91:0,12,169	1/1:12,0:11:5.83:66,6,0	0/0:22,0:22:32.14:0,32,450	0/0:28,0:25:18.16:0,18,328	1/1:22,0:21:23.50:497,23,0	1/1:7,0:6:11.70:87,12,0	1/1:13,1:14:6.06:88,6,0	1/1:21,0:17:1.82:5,2,0	0/0:20,0:19:18.26:0,18,227	1/1:9,0:9:1.27:4,1,0	0/1:16,0:12:14.77:42,0,15	1/1:14,1:14:14.30:186,14,0	0/0:10,0:10:23.37:0,23,314	1/1:18,1:17:0.60:157,1,0	0/1:11,0:9:3.49:3,0,113
chr10	37870588	.	AGAGAGC	A	3099.03	PASS	AB=1.000;AC=35;AF=0.625;AN=56;BaseQRankSum=-5.938;DP=576;FS=10.761;HRun=0;HaplotypeScore=171.4922;InbreedingCoeff=0.6540;MQ=47.02;MQ0=61;MQRankSum=-1.517;QD=8.83;ReadPosRankSum=-3.934;VQSLOD=1.0743;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:23:8.61:9,0,84	1/1:6,0:5:11.04:95,11,0	0/0:28,0:5:4.08:0,4,24	0/0:59,0:11:8.25:0,8,69	0/0:24,0:22:3.02:0,3,44	1/1:18,2:19:28.43:278,28,0	1/1:31,0:30:43.28:377,43,0	1/1:33,0:18:46.62:363,47,0	0/0:26,0:23:21.72:0,22,238	1/1:17,0:14:35.59:283,36,0	1/1:8,0:8:8.53:76,9,0	1/1:17,0:14:15.55:128,16,0	0/1:22,0:21:72.08:82,0,72	0/0:17,0:15:11.91:0,12,121	1/1:13,0:12:8.56:111,9,0	0/0:22,0:22:29.35:0,29,280	0/0:27,0:25:13.02:0,13,180	1/1:17,4:20:45.75:491,46,0	1/1:14,0:12:12.77:189,13,0	1/1:15,0:15:8.74:71,9,0	1/1:22,0:20:7.05:51,7,0	0/1:26,0:25:99:117,0,117	1/1:11,0:11:11.20:87,11,0	1/1:15,1:12:17.13:113,17,0	1/1:16,0:15:17.33:150,17,0	0/0:10,0:10:30:0,30,398	1/1:18,0:17:30.27:230,30,0	0/0:10,0:8:18.03:0,18,228
chr10	37870590	.	AGAGC	A	1921.46	PASS	AB=1.000;AC=31;AF=0.554;AN=56;BaseQRankSum=-4.981;DP=580;FS=1.713;HRun=0;HaplotypeScore=166.0273;InbreedingCoeff=0.3171;MQ=49.41;MQ0=56;MQRankSum=1.068;QD=5.06;ReadPosRankSum=-5.666;VQSLOD=0.5458;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:22:6.91:7,0,66	1/1:6,0:5:3.80:29,4,0	0/1:27,0:5:7.17:11,0,7	0/0:64,0:13:3.69:0,4,36	0/0:21,2:21:2.75:0,3,20	1/1:20,0:19:30.17:189,30,0	0/1:30,0:29:0.51:155,0,1	1/1:32,0:18:38.94:266,39,0	0/0:26,1:24:18.34:0,18,163	1/1:17,0:14:19.03:186,19,0	1/1:9,0:9:8.69:76,9,0	1/1:18,0:15:16.31:106,16,0	0/1:20,0:19:44.12:90,0,44	0/0:16,1:15:8.43:0,8,87	1/1:13,0:12:7:51,7,0	0/0:22,0:22:25.87:0,26,217	0/0:27,0:25:9.87:0,10,154	0/1:21,0:20:21.70:157,0,22	1/1:16,0:13:15.60:201,16,0	0/1:15,0:15:6.24:12,0,6	1/1:23,0:20:10.09:76,10,0	0/1:25,0:24:88.92:120,0,89	1/1:11,0:11:10.64:83,11,0	1/1:17,0:13:18:120,18,0	0/1:17,0:16:4.89:73,0,5	0/0:10,0:10:28.92:0,29,261	0/1:19,0:18:36.94:99,0,37	0/0:10,0:8:17.88:0,18,170
chr10	37870592	.	AGC	A	2816.28	PASS	AB=0.856;AC=36;AF=0.643;AN=56;BaseQRankSum=-6.285;DP=573;FS=0.000;HRun=0;HaplotypeScore=153.1001;InbreedingCoeff=-0.2814;MQ=50.04;MQ0=46;MQRankSum=0.766;QD=5.24;ReadPosRankSum=-3.689;VQSLOD=2.1001;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:22:29.02:29,0,62	0/1:6,0:5:18.11:21,0,18	0/1:24,0:5:5.62:6,0,10	0/1:61,0:16:4.26:4,0,64	0/0:9,14:21:2.73:0,3,20	1/1:20,0:19:25.91:194,26,0	0/1:28,2:29:5.49:189,0,5	1/1:31,0:18:38.73:287,39,0	0/1:13,15:25:73.22:73,0,138	1/1:15,1:13:1.37:194,1,0	1/1:8,1:9:8.99:76,9,0	1/1:14,3:15:21.38:238,21,0	0/1:17,4:20:38.68:203,0,39	0/1:9,8:15:33.74:34,0,73	1/1:13,0:12:2.68:43,3,0	0/1:13,8:21:57.02:57,0,187	0/1:10,17:25:61:61,0,127	0/1:21,0:20:38.74:150,0,39	1/1:6,10:13:16.19:268,16,0	0/1:5,10:15:10.71:11,0,13	1/1:20,1:19:10.31:77,10,0	0/1:19,5:23:82.41:205,0,82	1/1:10,1:11:11.64:120,12,0	1/1:16,1:13:20.84:205,21,0	0/1:17,0:16:9.38:76,0,9	0/1:10,0:10:19.23:19,0,96	0/1:16,2:17:68.49:134,0,68	0/0:13,0:11:4.24:0,4,76
chr10	37870773	.	CT	C	585.31	PASS	AB=0.875;AC=5;AF=0.089;AN=56;BaseQRankSum=6.505;DP=591;FS=12.997;HRun=11;HaplotypeScore=60.5164;InbreedingCoeff=0.7560;MQ=67.85;MQ0=0;MQRankSum=-1.113;QD=13.30;ReadPosRankSum=1.159;VQSLOD=2.2241;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,1:28:63.59:0,64,660	0/1:6,1:7:3.59:4,0,171	0/0:9,0:9:7.26:0,7,67	0/0:13,0:13:5.94:0,6,69	0/0:16,0:16:36.07:0,36,370	0/0:20,0:23:56.63:0,57,547	0/0:22,0:22:57.14:0,57,602	0/0:24,0:24:60.13:0,60,626	0/0:21,0:21:45.11:0,45,480	0/0:25,0:25:48.12:0,48,512	0/0:24,1:25:44.52:0,45,672	0/0:14,0:16:44.95:0,45,462	0/0:19,0:19:42.07:0,42,431	0/0:14,0:14:30.06:0,30,312	0/0:24,0:24:60.13:0,60,626	0/0:26,0:26:66.16:0,66,697	0/0:37,1:38:77.58:0,78,1015	0/0:29,0:29:75.19:0,75,800	0/0:19,0:20:27.41:0,27,436	0/0:28,0:29:69:0,69,712	0/0:14,0:14:39.07:0,39,400	0/0:17,0:17:45.11:0,45,479	0/0:14,1:15:11.45:0,11,327	0/0:27,0:27:54.04:0,54,727	0/0:23,0:24:51.11:0,51,528	1/1:4,26:30:65.82:532,66,0	0/0:29,0:29:66.15:0,66,691	1/1:0,7:7:20.98:172,21,0
chr10	37872190	.	GTCTC	G	6370.88	PASS	AB=0.653;AC=28;AF=0.500;AN=56;BaseQRankSum=-8.026;DP=539;FS=0.000;HRun=0;HaplotypeScore=97.8789;InbreedingCoeff=0.5116;MQ=62.93;MQ0=13;MQRankSum=-3.346;QD=22.28;ReadPosRankSum=-1.228;VQSLOD=4.2320;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:22:4.05:4,0,18	1/1:2,5:7:9.03:153,9,0	0/0:40,0:13:0.47:0,0,129	0/0:83,0:18:13.55:0,14,161	0/0:2,0:19:33.81:0,34,164	1/1:3,14:17:36.12:611,36,0	0/1:5,11:16:11.97:236,0,12	1/1:8,21:27:48.35:833,48,0	0/0:1,0:14:25.18:0,25,113	1/1:2,18:21:54.17:846,54,0	1/1:3,13:16:16.19:396,16,0	0/0:1,0:8:16.79:0,17,75	0/1:1,0:6:36.01:37,0,36	0/0:5,0:12:19.78:0,20,100	1/1:3,15:18:30.10:509,30,0	0/0:2,0:10:16.79:0,17,75	0/0:2,0:12:22.49:0,22,104	0/1:11,12:23:21.95:445,0,22	1/1:6,10:15:29.84:394,30,0	1/1:2,15:17:39.13:642,39,0	1/1:2,14:16:18.06:305,18,0	0/1:5,0:16:18.10:18,0,85	0/0:6,0:18:28.18:0,28,138	0/1:2,1:17:16.88:17,0,114	1/1:0,9:9:21.07:343,21,0	0/0:18,1:19:0.24:0,0,1009	1/1:2,16:18:36.10:582,36,0	0/0:16,0:16:30.10:0,30,721
chr10	37872231	.	TCTCC	T	744.70	PASS	AB=0.776;AC=4;AF=0.071;AN=56;BaseQRankSum=-0.183;DP=562;FS=0.000;HRun=0;HaplotypeScore=109.3436;InbreedingCoeff=0.3465;MQ=51.67;MQ0=34;MQRankSum=1.339;QD=5.77;ReadPosRankSum=0.358;VQSLOD=2.1018;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:22:19.23:0,19,386	0/0:4,0:4:9.03:0,9,198	0/0:80,0:18:24.03:0,24,432	0/1:98,0:21:1.43:1,0,321	0/0:21,0:21:60.11:0,60,1318	0/0:16,0:16:24.07:0,24,542	0/0:11,0:11:24.01:0,24,445	0/0:25,0:22:30.96:0,31,600	0/0:18,0:18:42.14:0,42,1014	0/0:21,0:21:45.15:0,45,986	0/0:13,0:13:33.11:0,33,746	0/0:13,0:13:33.10:0,33,750	0/0:10,0:10:21.07:0,21,499	0/0:11,0:11:24.08:0,24,578	0/0:15,0:15:24.08:0,24,586	0/0:11,0:11:24.08:0,24,599	0/0:9,0:9:17.82:0,18,348	0/0:16,0:16:29.44:0,29,601	0/0:13,0:12:24:0,24,388	0/0:19,0:19:36.12:0,36,855	0/0:12,0:12:18.06:0,18,443	0/0:8,0:8:16.86:0,17,323	0/0:15,0:15:33.07:0,33,717	0/0:18,0:18:30.10:0,30,749	0/0:12,0:12:18.05:0,18,505	0/1:4,17:21:20.76:785,0,21	0/0:18,0:18:42.10:0,42,934	1/1:6,3:9:3.01:51,3,0
chr10	37872412	.	ACCT	A	6185.65	PASS	AB=0.513;AC=31;AF=0.554;AN=56;BaseQRankSum=12.810;DP=419;FS=1.222;HRun=0;HaplotypeScore=133.0138;InbreedingCoeff=0.7610;MQ=68.62;MQ0=0;MQRankSum=-13.959;QD=32.56;ReadPosRankSum=0.763;VQSLOD=5.0051;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,8:11:22.97:354,23,0	1/1:1,5:6:18.05:237,18,0	0/0:18,0:17:47.78:0,48,963	0/0:19,0:17:45.06:0,45,929	0/0:23,0:23:66.23:0,66,1602	1/1:0,10:10:30.10:398,30,0	1/1:1,9:10:27.09:369,27,0	1/1:0,13:12:33.11:491,33,0	0/0:20,0:20:60.21:0,60,1463	1/1:0,13:13:39.13:564,39,0	0/1:0,11:11:30.35:68,0,30	1/1:0,13:13:34.81:476,35,0	0/0:19,0:19:57.20:0,57,1399	0/0:11,0:11:33.11:0,33,814	1/1:1,11:12:36.10:495,36,0	0/0:12,0:12:36.12:0,36,888	0/0:35,0:35:99:0,105,2588	1/1:1,4:6:18.03:213,18,0	1/1:0,14:14:42.14:631,42,0	1/1:0,11:13:6.63:269,7,0	0/1:1,6:7:9.71:135,0,10	0/0:17,0:17:48.16:0,48,1183	0/1:0,20:20:21.45:372,0,21	1/1:1,5:6:18.06:246,18,0	1/1:0,7:7:18.06:243,18,0	0/0:30,2:31:7.18:0,7,1985	1/1:0,16:18:32.53:627,33,0	0/0:23,0:23:69.24:0,69,1700
chr10	37872416	.	T	TA	4555.71	PASS	AB=0.857;AC=33;AF=0.589;AN=56;BaseQRankSum=16.555;DP=418;FS=1.655;HRun=0;HaplotypeScore=125.1080;InbreedingCoeff=0.9341;MQ=70.04;MQ0=0;MQRankSum=-16.229;QD=24.36;ReadPosRankSum=-1.768;VQSLOD=4.5964;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,0:10:26.22:234,26,0	1/1:5,1:6:18.01:168,18,0	0/0:18,0:18:44.77:0,45,533	0/0:15,0:13:36.12:0,36,484	0/0:24,0:24:72.23:0,72,989	1/1:10,0:10:29.99:267,30,0	1/1:9,1:10:27.01:245,27,0	1/1:13,0:12:33.07:333,33,0	0/0:20,0:20:60.15:0,60,802	1/1:13,0:13:39.04:379,39,0	1/1:11,0:11:13.70:152,14,0	1/1:13,0:13:39.01:353,39,0	0/0:20,0:20:60.17:0,60,802	0/0:11,0:11:33.11:0,33,462	1/1:11,2:13:23.67:237,24,0	0/0:14,0:14:39.13:0,39,545	0/0:37,0:37:99:0,108,1490	0/1:5,1:5:4.99:91,0,5	1/1:14,0:14:42.09:432,42,0	1/1:12,0:12:29.12:277,29,0	1/1:6,0:6:17.75:150,18,0	0/0:16,0:16:48.16:0,48,671	1/1:20,0:20:53.63:461,54,0	1/1:5,0:5:15:135,15,0	1/1:7,0:7:18:163,18,0	0/0:30,0:30:32.68:0,33,1115	1/1:18,0:18:50.99:478,51,0	0/0:25,0:25:75.22:0,75,1003
chr10	37872417	.	T	TAA	7174.68	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=16.378;DP=419;FS=0.000;HRun=1;HaplotypeScore=124.5294;InbreedingCoeff=0.9507;MQ=70.57;MQ0=0;MQRankSum=-15.724;QD=38.57;ReadPosRankSum=-2.339;VQSLOD=4.2153;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,8:8:24.04:326,24,0	1/1:2,5:7:18.06:263,18,0	0/0:19,0:18:47.66:0,48,625	0/0:16,0:14:30.10:0,30,442	0/0:24,0:24:72.24:0,72,1101	1/1:0,10:10:30.10:396,30,0	1/1:1,9:10:27.09:378,27,0	1/1:0,13:12:33.11:486,33,0	0/0:20,0:20:57.19:0,57,867	1/1:0,13:13:39.13:553,39,0	1/1:1,10:11:21.07:304,21,0	1/1:0,13:13:39.13:530,39,0	0/0:20,0:20:57.18:0,57,850	0/0:11,0:11:33.11:0,33,504	1/1:5,8:13:36.12:490,36,0	0/0:14,0:14:42.13:0,42,621	0/0:39,0:39:99:0,111,1644	1/1:2,4:5:2.56:150,3,0	1/1:0,14:14:42.14:629,42,0	1/1:1,11:12:33.10:467,33,0	1/1:0,6:6:18.06:251,18,0	0/0:16,0:16:48.16:0,48,735	1/1:0,20:20:57.14:761,57,0	1/1:0,5:5:15.05:196,15,0	1/1:0,7:7:18.06:242,18,0	0/0:29,1:30:5.75:0,6,1201	1/1:2,16:18:54.14:750,54,0	0/0:24,0:24:69.18:0,69,980
chr10	37872555	.	TC	T	1721.41	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=7.639;DP=563;FS=10.111;HRun=2;HaplotypeScore=61.9046;InbreedingCoeff=0.9876;MQ=78.40;MQ0=3;MQRankSum=-0.870;QD=31.30;ReadPosRankSum=4.158;VQSLOD=2.6896;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:53.99:0,54,1195	0/0:8,0:8:24.08:0,24,357	0/0:32,0:30:67.68:0,68,861	0/0:34,1:28:56.14:0,56,782	0/0:27,0:27:78.24:0,78,1144	0/0:13,0:12:39.13:0,39,567	0/0:16,0:16:48.13:0,48,678	0/0:28,0:27:69.17:0,69,949	0/0:29,0:29:87.26:0,87,1245	0/0:24,0:24:72.24:0,72,1076	0/0:13,0:13:36.11:0,36,518	1/1:0,17:17:51.17:660,51,0	0/0:23,0:23:69.15:0,69,914	0/0:11,0:11:33.09:0,33,473	0/0:27,0:27:75.23:0,75,1081	0/0:20,0:20:60.19:0,60,876	0/0:28,0:29:87.10:0,87,1243	0/0:10,0:10:27.09:0,27,398	0/0:13,0:13:39.11:0,39,543	0/0:21,0:21:63.19:0,63,901	0/0:15,0:15:42.10:0,42,584	0/0:18,0:18:54.18:0,54,808	1/1:1,21:22:63.20:814,63,0	1/1:0,16:16:30.10:389,30,0	0/0:15,0:15:45.15:0,45,671	0/0:29,0:29:81.23:0,81,1132	0/0:18,0:18:54.17:0,54,787	0/0:4,0:4:12.03:0,12,159
chr10	37872649	.	TC	T	982.88	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=8.459;DP=679;FS=3.581;HRun=3;HaplotypeScore=98.7689;InbreedingCoeff=0.9957;MQ=89.69;MQ0=0;MQRankSum=-3.154;QD=27.30;ReadPosRankSum=1.466;VQSLOD=2.8133;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,35:36:87.27:1078,87,0	0/0:13,0:13:36.12:0,36,518	0/0:31,0:31:87:0,87,1153	0/0:24,0:24:66.69:0,67,810	0/0:33,0:33:99:0,99,1417	0/0:25,0:25:72.22:0,72,1017	0/0:19,0:19:57.19:0,57,820	0/0:31,0:31:93.31:0,93,1334	0/0:25,0:25:72.22:0,72,1000	0/0:27,0:27:75.24:0,75,1048	0/0:18,0:18:54.18:0,54,777	0/0:7,0:7:21.07:0,21,302	0/0:27,0:27:81.27:0,81,1164	0/0:21,0:21:60.20:0,60,863	0/0:28,0:28:84.25:0,84,1148	0/0:19,0:19:57.18:0,57,803	0/0:31,0:31:90.29:0,90,1268	0/0:18,0:18:51.11:0,51,693	0/0:21,0:21:57.19:0,57,819	0/0:29,0:29:80.60:0,81,1067	0/0:34,0:34:99:0,99,1365	0/0:26,0:26:75.25:0,75,1079	0/0:19,0:19:54.18:0,54,775	0/0:30,0:30:75.25:0,75,1077	0/0:25,0:24:75.25:0,75,1072	0/0:27,0:27:78.25:0,78,1090	0/0:23,0:23:66.22:0,66,950	0/0:12,0:12:36.12:0,36,518
chr10	37873103	.	ATGTATG	A	11258.94	PASS	AB=1.000;AC=39;AF=0.750;AN=52;BaseQRankSum=7.999;DP=916;FS=8.983;HRun=0;HaplotypeScore=361.4573;InbreedingCoeff=0.6201;MQ=48.10;MQ0=3;MQRankSum=-2.039;QD=16.18;ReadPosRankSum=-1.469;VQSLOD=2.4273;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:41.96:0,42,1233	1/1:7,0:7:2.99:24,3,0	0/0:23,0:11:25.59:0,26,573	0/0:31,0:16:22.75:0,23,721	1/1:13,12:25:24.08:488,24,0	1/1:19,0:19:8.59:103,9,0	1/1:26,0:26:10.40:165,10,0	1/1:37,0:37:84.21:1427,84,0	1/1:19,33:52:53.92:1120,54,0	1/1:57,0:57:99:2155,144,0	./.	1/1:34,0:34:23.89:330,24,0	1/1:17,20:37:54.10:1118,54,0	1/1:13,32:45:27.09:490,27,0	1/1:40,0:40:14.93:156,15,0	1/1:20,31:51:57.02:1127,57,0	1/1:15,10:25:21.61:401,22,0	0/1:17,0:17:63.36:250,0,63	0/1:25,0:24:3.13:441,0,3	1/1:25,0:25:8.97:69,9,0	0/1:58,0:57:11.56:111,0,12	1/1:16,31:47:36.12:687,36,0	1/1:24,0:24:5.67:88,6,0	./.	1/1:19,0:19:2.99:23,3,0	0/0:63,0:63:64.64:0,65,5103	1/1:26,0:26:33.04:485,33,0	0/0:32,0:32:86.51:0,87,2487
chr10	37873107	.	ATGTGTATGTGTCTATG	A	14897.69	PASS	AB=0.892;AC=36;AF=0.643;AN=56;BaseQRankSum=0.844;DP=887;FS=9.525;HRun=0;HaplotypeScore=437.3215;InbreedingCoeff=0.0940;MQ=47.35;MQ0=4;MQRankSum=-2.862;QD=19.68;ReadPosRankSum=1.350;VQSLOD=1.8314;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:41.64:0,42,2023	1/1:5,1:6:3.01:48,3,0	0/0:27,0:12:29.42:0,29,1274	0/0:36,0:21:30.86:0,31,1766	0/1:21,0:22:99:191,0,148	1/1:6,9:18:9.07:180,9,0	1/1:10,11:24:16.63:300,17,0	1/1:26,8:36:86.51:2717,87,0	0/1:51,0:53:99:312,0,757	1/1:23,32:56:99:5625,154,0	0/1:1,12:13:0:2,0,0	1/1:12,20:32:28.85:648,29,0	0/1:37,0:37:99:319,0,436	0/1:39,0:42:99:122,0,422	1/1:16,21:37:19.46:307,19,0	0/1:48,0:51:99:257,0,980	0/1:25,0:25:99:101,0,412	0/1:14,1:17:99:539,0,141	1/1:13,5:18:21.10:1185,21,0	1/1:9,13:22:8.95:146,9,0	0/1:38,8:54:40.22:279,0,40	0/1:44,0:46:99:280,0,345	1/1:6,16:23:5.69:141,6,0	0/1:9,9:20:0:0,0,0	1/1:3,13:16:3.01:50,3,0	0/1:59,2:62:99:136,0,10326	1/1:10,13:23:34.06:1014,34,0	0/0:32,0:32:75.51:0,76,4691
chr10	37873111	.	GTA	G	3105.70	PASS	AB=0.935;AC=27;AF=0.482;AN=56;BaseQRankSum=11.394;DP=899;FS=17.314;HRun=0;HaplotypeScore=353.7796;InbreedingCoeff=0.0457;MQ=46.52;MQ0=4;MQRankSum=-2.293;QD=4.69;ReadPosRankSum=1.971;VQSLOD=1.1375;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:42.06:0,42,742	0/0:4,2:6:0.47:0,0,1	0/0:33,1:16:30.80:0,31,636	0/0:34,1:21:34.60:0,35,601	0/1:22,0:23:7.85:105,0,8	0/1:16,2:18:3.15:12,0,3	0/1:18,5:23:3.01:79,0,3	0/1:20,15:35:37.62:420,0,38	0/1:51,0:53:16.13:194,0,16	1/1:51,8:58:66.90:851,67,0	0/0:14,1:15:0:0,0,1	1/1:27,3:30:19.73:214,20,0	1/1:33,1:37:4.25:194,4,0	0/1:41,0:44:20.95:85,0,21	1/1:32,5:38:15.90:148,16,0	0/1:49,0:51:31.24:197,0,31	0/1:24,0:24:31.64:53,0,32	0/1:16,1:17:67.60:91,0,68	0/1:18,1:18:45.60:203,0,46	1/1:21,2:24:2.09:23,2,0	0/1:49,10:57:24.06:69,0,24	0/1:46,0:46:2.75:109,0,3	1/1:20,1:21:1.18:41,1,0	0/0:18,4:22:0:0,0,0	0/1:17,0:17:0.09:0,0,1	0/0:61,0:61:99:0,154,3179	1/1:22,1:23:23.53:178,24,0	0/0:34,0:34:96.56:0,97,1497
chr10	37873113	.	A	ATG	342.25	PASS	AB=0.996;AC=21;AF=0.375;AN=56;BaseQRankSum=1.899;DP=922;FS=14.691;HRun=0;HaplotypeScore=370.7184;InbreedingCoeff=-0.0396;MQ=45.53;MQ0=4;MQRankSum=-3.094;QD=0.61;ReadPosRankSum=-2.902;VQSLOD=0.1893;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,1:30:39.02:0,39,480	0/1:8,0:8:0:0,0,0	0/0:31,0:16:42.55:0,43,510	0/0:38,0:23:32.47:0,32,415	0/1:23,0:23:33.63:34,0,85	1/1:19,0:19:3.78:28,4,0	1/1:24,0:24:7.24:41,7,0	0/1:38,0:38:99:120,0,101	0/1:55,0:55:2.34:2,0,221	0/1:59,0:58:60.31:60,0,322	0/0:16,0:16:0:0,0,1	0/1:32,0:32:4.68:37,0,5	0/1:36,0:36:14.49:14,0,111	0/0:45,0:45:2.75:0,3,143	0/1:38,0:38:9.78:10,0,11	0/0:51,0:51:28:0,28,232	0/0:24,0:23:21.94:0,22,104	0/1:17,0:17:18.67:19,0,95	0/1:18,0:17:13.82:14,0,71	0/1:24,0:24:0.07:0,0,2	0/1:56,4:58:12.29:17,0,12	0/1:46,0:46:6.59:7,0,61	1/1:23,0:23:1.12:23,1,0	0/0:21,1:22:0:0,0,0	0/1:18,0:18:0.03:0,0,0	0/0:64,0:64:99:0,163,2264	0/1:25,0:25:21.40:59,0,21	0/0:36,0:36:87.08:0,87,1105
chr10	37873115	.	GTGTC	G	3710.92	PASS	AB=0.919;AC=30;AF=0.536;AN=56;BaseQRankSum=10.961;DP=936;FS=8.338;HRun=0;HaplotypeScore=376.3052;InbreedingCoeff=0.5172;MQ=46.07;MQ0=4;MQRankSum=-6.995;QD=7.35;ReadPosRankSum=0.181;VQSLOD=0.9243;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:38.24:0,38,978	1/1:5,2:7:3.89:36,4,0	0/0:37,0:18:46.01:0,46,1059	0/0:42,0:28:30.78:0,31,978	0/0:25,0:25:6.29:0,6,277	1/1:19,2:21:6.11:41,6,0	1/1:18,5:23:8.74:78,9,0	1/1:24,15:38:89.04:1000,89,0	0/0:57,0:57:16.78:0,17,412	1/1:49,8:56:99:1496,157,0	0/1:15,1:16:0:1,0,0	1/1:29,3:32:16.96:164,17,0	0/1:39,1:40:15.34:15,0,292	0/0:46,0:46:11.94:0,12,341	1/1:31,6:38:11.31:92,11,0	0/0:53,0:53:7.60:0,8,400	0/1:26,0:25:2.84:3,0,145	0/1:14,2:16:82.89:113,0,83	1/1:15,1:15:3.85:236,4,0	1/1:21,2:24:1.77:7,2,0	0/1:50,10:58:46.26:46,0,78	0/0:46,0:46:14.54:0,15,131	1/1:22,1:23:3.90:48,4,0	0/1:19,4:23:0.21:0,0,0	1/1:18,0:18:1.24:3,1,0	0/0:64,0:64:99:0,102,4655	1/1:25,1:26:35.50:330,36,0	0/0:30,0:30:83.65:0,84,2187
chr10	37873117	.	GTC	G	1954.61	PASS	AB=1.000;AC=30;AF=0.536;AN=56;BaseQRankSum=11.653;DP=916;FS=21.864;HRun=0;HaplotypeScore=358.6081;InbreedingCoeff=0.6552;MQ=45.67;MQ0=4;MQRankSum=-7.527;QD=4.26;ReadPosRankSum=0.699;VQSLOD=1.4415;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:33.16:0,33,613	1/1:6,0:6:2.88:15,3,0	0/0:38,0:18:45.22:0,45,763	0/0:43,1:31:39.73:0,40,792	0/0:25,0:25:0.04:0,0,247	1/1:20,1:21:6.02:32,6,0	1/1:20,0:20:5.74:56,6,0	1/1:39,0:38:66.48:547,66,0	0/0:57,0:57:39.54:0,40,496	1/1:51,0:50:99:777,117,0	0/1:16,0:16:0:0,0,0	1/1:29,1:30:14.34:136,14,0	0/0:38,0:38:27.22:0,27,313	0/0:46,0:46:18.36:0,18,351	1/1:34,1:35:8.46:62,8,0	0/0:52,0:52:46.05:0,46,522	0/0:27,0:26:14.57:0,15,200	0/1:15,0:15:25.26:68,0,25	1/1:14,0:13:14.29:138,14,0	1/1:21,1:22:0.46:1,0,0	1/1:54,2:54:11.17:44,11,0	0/1:44,0:44:4.54:5,0,153	1/1:24,0:24:5.84:60,6,0	0/1:23,0:23:0.06:0,0,0	1/1:19,0:19:3.37:16,3,0	0/0:67,0:67:99:0,167,3388	1/1:24,0:24:28.05:186,28,0	0/0:30,0:30:87.07:0,87,1596
chr10	37873121	.	ATG	A	1221.18	PASS	AB=0.968;AC=28;AF=0.500;AN=56;BaseQRankSum=11.845;DP=907;FS=1.990;HRun=0;HaplotypeScore=357.2189;InbreedingCoeff=0.5307;MQ=46.16;MQ0=4;MQRankSum=-7.764;QD=2.87;ReadPosRankSum=2.331;VQSLOD=1.4508;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:26,2:28:10.12:10,0,397	1/1:6,0:6:2.37:8,2,0	0/0:39,0:21:49.59:0,50,780	0/0:51,0:35:69.52:0,70,1095	0/0:27,0:27:33.02:0,33,506	1/1:17,1:18:8.96:71,9,0	0/1:19,0:19:0.17:1,0,0	0/1:35,0:34:7.73:140,0,8	0/0:55,0:55:65.94:0,66,910	1/1:50,0:49:55.68:472,56,0	1/1:17,0:17:2.99:23,3,0	1/1:31,1:32:16.72:118,17,0	0/0:39,0:39:63:0,63,824	0/0:46,0:46:40.74:0,41,603	1/1:35,2:37:11.18:81,11,0	0/0:52,0:52:71.73:0,72,994	0/0:28,1:28:35.13:0,35,438	0/1:12,2:14:27.72:41,0,28	0/1:10,0:9:19.21:55,0,19	1/1:24,0:24:0.54:26,1,0	1/1:45,4:47:11.99:126,12,0	0/0:45,0:45:35.27:0,35,522	1/1:21,0:21:2.78:23,3,0	0/1:22,0:22:0:0,0,0	1/1:18,0:18:2.99:25,3,0	0/0:66,0:67:99:0,124,2932	1/1:25,0:25:25.95:186,26,0	0/0:32,0:32:89.98:0,90,1482
chr10	37873137	.	G	GTGTA	339.20	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-0.730;DP=1031;FS=1.182;HRun=0;HaplotypeScore=394.0122;InbreedingCoeff=0.7435;MQ=45.14;MQ0=4;MQRankSum=-0.264;QD=13.05;ReadPosRankSum=-0.429;VQSLOD=2.1383;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:14,12:26:22.40:432,22,0	0/0:6,0:6:3.01:0,3,51	0/0:53,0:32:66.99:0,67,928	0/0:53,0:37:65.30:0,65,994	0/0:23,0:23:36.11:0,36,598	0/0:23,0:23:16.68:0,17,241	0/0:27,0:27:22.27:0,22,335	0/0:49,0:47:99:0,108,1525	0/0:56,0:56:60.73:0,61,982	0/0:55,0:54:99:0,135,2096	0/0:19,0:19:4.95:0,5,62	0/0:42,0:42:48.37:0,48,688	0/0:40,0:40:68.67:0,69,1080	0/0:51,0:51:58.48:0,58,971	0/0:41,0:41:30.71:0,31,456	0/0:49,0:49:70.96:0,71,1148	0/0:32,0:31:42.17:0,42,588	0/0:16,0:16:36.69:0,37,453	0/0:10,0:10:30.09:0,30,484	0/0:31,0:31:37.28:0,37,593	0/0:75,0:73:30.03:0,30,419	0/0:40,0:40:36.33:0,36,665	0/0:28,0:28:22.14:0,22,345	0/0:32,0:32:20.53:0,21,323	0/0:25,0:25:17.81:0,18,230	0/0:63,0:63:99:0,162,2631	0/0:28,0:28:42.11:0,42,682	0/0:37,0:37:96.31:0,96,1622
chr10	37873163	.	A	ATG	26804.26	PASS	AB=0.937;AC=49;AF=0.875;AN=56;BaseQRankSum=-9.949;DP=1190;FS=18.449;HRun=0;HaplotypeScore=254.3324;InbreedingCoeff=0.8138;MQ=52.13;MQ0=4;MQRankSum=4.099;QD=25.63;ReadPosRankSum=7.120;VQSLOD=4.2231;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:5,25:30:24.08:435,24,0	1/1:0,8:8:8.57:164,9,0	0/0:55,0:45:99:0,115,1474	0/0:57,0:44:92.80:0,93,1111	1/1:3,30:33:53.43:989,53,0	1/1:5,28:33:39.13:715,39,0	1/1:5,25:32:35.93:709,36,0	1/1:10,42:51:99:2242,108,0	1/1:6,55:61:95.87:1758,96,0	1/1:7,49:57:99:2435,129,0	1/1:1,18:19:15.05:275,15,0	1/1:8,45:52:63.88:1195,64,0	1/1:4,50:54:99:1813,99,0	1/1:6,50:56:92.86:1685,93,0	1/1:3,52:54:66.22:1183,66,0	1/1:2,53:55:99:1814,99,0	1/1:4,30:34:62.10:1203,62,0	1/1:6,13:19:27.25:604,27,0	1/1:2,21:23:63.18:1119,63,0	1/1:1,39:41:62.48:1142,62,0	1/1:26,71:98:66.84:1215,67,0	1/1:7,31:39:65.64:1207,66,0	1/1:0,31:31:35.67:659,36,0	1/1:5,33:38:23.76:440,24,0	1/1:2,29:31:39.13:715,39,0	0/1:55,4:59:44.53:45,0,2113	1/1:2,30:32:57.11:1043,57,0	0/0:32,0:32:96.28:0,96,1352
chr10	37873457	.	CTGTGTGTGTA	C	17145.74	PASS	AB=0.629;AC=29;AF=0.518;AN=56;BaseQRankSum=17.897;DP=1056;FS=3.975;HRun=0;HaplotypeScore=349.4870;InbreedingCoeff=0.7717;MQ=53.40;MQ0=14;MQRankSum=-11.776;QD=30.24;ReadPosRankSum=-0.436;VQSLOD=3.5509;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:70.87:0,71,2592	1/1:2,10:12:18.06:529,18,0	0/0:45,0:24:61.56:0,62,1533	0/0:56,0:29:49.81:0,50,1850	0/0:39,0:39:99:0,99,4417	1/1:8,27:35:45.63:1301,46,0	1/1:5,25:31:23.46:652,23,0	0/1:10,30:39:48.58:1521,0,49	0/0:44,0:44:99:0,117,4992	1/1:7,54:60:99:3165,144,0	1/1:2,17:19:8.24:284,8,0	1/1:3,45:48:72.25:2152,72,0	0/0:45,0:45:99:0,123,5987	0/0:36,0:36:99:0,102,4299	1/1:7,59:65:78.27:2174,78,0	0/0:45,0:45:99:0,111,4913	0/0:38,0:38:83.53:0,84,3481	0/1:8,4:11:69.38:277,0,69	1/1:7,17:21:48.08:941,48,0	1/1:1,27:28:20.63:585,21,0	1/1:43,7:48:32.55:540,33,0	0/0:32,0:32:72.25:0,72,3225	1/1:3,34:36:16.01:564,16,0	0/1:9,30:39:80.25:320,0,80	1/1:7,18:24:21.07:484,21,0	0/0:46,1:46:28.60:0,29,4926	1/1:2,37:39:53.37:1656,53,0	0/0:29,0:29:66.20:0,66,2490
chr10	37875444	.	T	TA	814.91	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=-7.351;DP=676;FS=3.398;HRun=0;HaplotypeScore=154.7574;InbreedingCoeff=0.7414;MQ=78.70;MQ0=1;MQRankSum=-3.091;QD=15.38;ReadPosRankSum=-3.311;VQSLOD=4.1858;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,32:36:85.26:909,85,0	0/0:11,0:11:28.73:0,29,141	0/0:24,0:21:47.76:0,48,683	0/0:23,0:22:32.79:0,33,554	0/0:23,0:23:35.08:0,35,304	0/0:26,0:26:44.53:0,45,327	0/0:18,0:18:26.21:0,26,230	0/0:30,0:30:51.91:0,52,323	0/0:19,0:19:26.43:0,26,247	0/0:40,0:40:43.61:0,44,408	0/1:17,0:17:2.58:3,0,146	0/0:20,0:20:48.61:0,49,258	0/0:22,0:22:32.23:0,32,268	0/0:18,0:18:47.04:0,47,261	0/0:15,0:15:38.23:0,38,194	0/0:15,0:15:40.88:0,41,215	0/0:28,0:28:57.64:0,58,400	0/0:28,0:28:75.70:0,76,429	0/0:23,0:23:46.47:0,46,246	0/0:32,0:32:54.47:0,54,381	0/0:25,0:25:72.93:0,73,417	0/0:31,0:31:57.07:0,57,396	0/0:28,0:28:40.65:0,41,300	0/0:14,0:14:37.32:0,37,209	0/0:32,1:33:63.65:0,64,452	0/0:20,0:20:28.40:0,28,235	0/0:30,0:30:80.93:0,81,439	0/0:27,0:27:62.96:0,63,349
chr10	37876536	.	AT	A	678.42	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.163;DP=591;FS=7.987;HRun=7;HaplotypeScore=62.0426;InbreedingCoeff=0.9805;MQ=68.13;MQ0=0;MQRankSum=-1.359;QD=20.56;ReadPosRankSum=1.557;VQSLOD=2.9857;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,30:33:78.09:773,78,0	0/0:9,0:9:27.09:0,27,340	0/0:14,0:13:35.22:0,35,331	0/0:10,0:8:15.04:0,15,175	0/0:31,0:31:84.27:0,84,1055	0/0:19,0:19:54.17:0,54,677	0/0:18,0:18:48.07:0,48,571	0/0:28,0:28:78.25:0,78,981	0/0:18,0:18:54.15:0,54,655	0/0:29,0:29:75.24:0,75,944	0/0:33,0:33:93.30:0,93,1169	0/0:20,0:20:54.17:0,54,679	0/0:18,0:18:45.14:0,45,555	0/0:15,0:15:33.06:0,33,398	0/0:20,0:20:60.18:0,60,743	0/0:20,0:20:51.14:0,51,617	0/0:20,0:20:54.13:0,54,650	0/0:22,0:22:60.17:0,60,740	0/0:22,0:22:48.15:0,48,595	0/0:26,0:26:72.23:0,72,906	0/0:9,0:9:24.08:0,24,302	0/0:21,0:21:60.16:0,60,728	0/0:20,0:20:60.09:0,60,695	0/0:11,0:11:30.10:0,30,377	0/0:34,0:34:90.27:0,90,1117	0/0:28,0:28:81.13:0,81,981	0/0:31,0:31:81.23:0,81,990	0/0:12,0:12:36.08:0,36,436
chr10	37876553	.	C	CATCT	1551.25	PASS	AB=0.853;AC=10;AF=0.200;AN=50;BaseQRankSum=-3.158;DP=623;FS=0.734;HRun=0;HaplotypeScore=102.8529;InbreedingCoeff=0.3654;MQ=62.43;MQ0=5;MQRankSum=-0.149;QD=11.08;ReadPosRankSum=-0.542;VQSLOD=2.8111;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:39:33.01:0,33,426	0/1:10,1:12:51.07:51,0,190	./.	./.	0/0:31,0:31:36.11:0,36,517	0/0:25,0:25:24.08:0,24,357	0/0:15,0:17:3:0,3,28	./.	0/0:20,0:21:6.10:0,6,356	0/0:25,0:25:15.04:0,15,206	0/0:34,0:34:42.09:0,42,557	1/1:13,7:20:18.06:409,18,0	0/1:9,8:17:30.05:261,0,30	0/0:13,0:13:21.06:0,21,290	0/0:21,0:22:39.12:0,39,551	1/1:9,9:18:21.07:484,21,0	0/0:21,0:21:36.12:0,36,541	0/0:20,0:20:24.05:0,24,331	0/0:16,0:16:3:0,3,27	0/0:29,0:30:45.15:0,45,659	0/0:12,0:12:12.04:0,12,179	0/1:24,0:24:19.22:19,0,457	0/0:19,0:21:26.96:0,27,351	0/0:9,0:9:3.01:0,3,45	0/0:34,0:37:54.17:0,54,777	0/1:26,1:34:14.26:371,0,14	0/0:27,0:27:21.07:0,21,315	1/1:10,4:15:6.02:104,6,0
chr10	37876758	.	CA	C	6484.43	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=13.656;DP=694;FS=6.197;HRun=1;HaplotypeScore=68.5329;InbreedingCoeff=0.9874;MQ=79.44;MQ0=0;MQRankSum=0.947;QD=35.83;ReadPosRankSum=2.664;VQSLOD=5.0729;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:87.28:0,87,1357	0/0:15,0:15:45.14:0,45,683	0/0:24,0:23:8.16:0,8,625	0/0:18,0:18:31.44:0,31,569	1/1:0,35:35:99:1375,99,0	0/0:35,0:35:99:0,105,1641	0/0:27,0:27:81.24:0,81,1238	0/0:36,0:36:99:0,105,1609	1/1:0,31:31:81.27:1129,81,0	0/0:23,0:23:66.21:0,66,1009	0/0:28,0:28:84.26:0,84,1291	0/0:18,0:18:54.18:0,54,859	1/1:0,17:17:39.13:543,39,0	1/1:0,19:19:57.19:795,57,0	0/0:23,0:23:69.21:0,69,1052	1/1:0,23:23:54.18:753,54,0	1/1:0,28:28:66.22:920,66,0	0/0:29,0:29:87.20:0,87,1296	0/0:19,0:19:57.16:0,57,826	0/0:27,0:27:81.25:0,81,1240	0/0:22,0:22:66.18:0,66,992	1/1:0,28:28:75.10:970,75,0	0/0:18,0:18:54.14:0,54,807	0/0:21,0:21:63.18:0,63,952	0/0:23,0:23:69.19:0,69,1021	0/0:27,0:27:81.26:0,81,1248	0/0:33,0:32:99:0,99,1456	0/0:18,0:18:54.09:0,54,735
chr10	37877506	.	TCC	T	11534.71	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=9.200;DP=565;FS=15.719;HRun=9;HaplotypeScore=115.1492;InbreedingCoeff=0.9829;MQ=73.78;MQ0=0;MQRankSum=-3.023;QD=29.35;ReadPosRankSum=4.146;VQSLOD=3.6744;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,29:31:75.22:870,75,0	1/1:1,11:12:33.10:384,33,0	0/0:21,0:18:12.95:0,13,456	0/0:28,0:28:52.19:0,52,763	0/0:12,0:12:27.09:0,27,442	1/1:0,21:21:57.17:663,57,0	1/1:3,22:25:57.17:664,57,0	1/1:6,23:29:69.18:804,69,0	0/0:12,0:12:36.12:0,36,588	1/1:2,29:31:81.22:943,81,0	1/1:4,14:19:42.12:487,42,0	1/1:0,18:18:48.14:557,48,0	0/0:19,0:19:54.18:0,54,864	0/0:20,0:20:57.19:0,57,904	1/1:0,19:19:51.15:594,51,0	0/0:14,0:14:39.12:0,39,617	0/0:22,0:22:63.16:0,63,980	1/1:2,14:16:42.12:489,42,0	1/1:1,18:18:54.16:629,54,0	1/1:1,23:24:66.12:751,66,0	1/1:5,31:36:69.20:803,69,0	0/0:8,0:8:24.08:0,24,394	1/1:0,30:30:87.26:1012,87,0	1/1:1,17:18:51.15:592,51,0	1/1:3,25:28:72.21:839,72,0	0/0:6,0:9:8.94:0,9,69	1/1:3,14:17:39.11:454,39,0	0/0:0,0:7:12.02:0,12,116
chr10	37878461	.	C	CGAAAAAAGAAAAAA	20903.29	PASS	AB=1.000;AC=37;AF=0.661;AN=56;BaseQRankSum=-5.404;DP=525;FS=41.633;HRun=0;HaplotypeScore=182.2282;InbreedingCoeff=0.6472;MQ=45.35;MQ0=15;MQRankSum=-10.107;QD=50.86;ReadPosRankSum=-5.876;VQSLOD=1.9510;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:7,0:7:3.01:129,3,0	1/1:4,3:7:12.04:629,12,0	0/0:8,0:4:8.77:0,9,153	0/0:6,0:2:1.98:0,2,39	0/1:26,0:26:53.81:54,0,136	1/1:14,5:19:30.08:1719,30,0	1/1:20,2:20:15.51:812,16,0	1/1:41,0:40:60.18:2591,60,0	0/0:17,0:17:9.67:0,10,101	1/1:14,2:17:24.04:1093,24,0	1/1:16,7:24:26.72:1615,27,0	1/1:21,0:20:15.02:578,15,0	0/0:14,0:14:14.94:0,15,118	0/0:16,0:15:9.61:0,10,91	1/1:14,3:17:24.08:1376,24,0	0/1:14,0:14:29.54:43,0,30	0/0:24,0:21:28.86:0,29,203	1/1:23,1:21:30.10:1442,30,0	1/1:23,1:24:30.08:1120,30,0	1/1:20,6:26:30.09:1603,30,0	1/1:9,0:7:9.03:433,9,0	0/1:21,0:21:12.12:12,0,72	1/1:26,0:28:39.60:2040,40,0	1/1:11,0:11:9.03:474,9,0	1/1:18,8:26:27.08:1639,27,0	0/0:22,0:22:45.09:0,45,1450	1/1:20,5:24:27.56:1501,28,0	0/0:7,0:7:12.04:0,12,466
chr10	37878469	.	G	GAAAA	5084.36	PASS	AB=0.974;AC=26;AF=0.464;AN=56;BaseQRankSum=0.122;DP=517;FS=18.910;HRun=6;HaplotypeScore=94.2429;InbreedingCoeff=-0.0231;MQ=45.88;MQ0=15;MQRankSum=1.337;QD=14.36;ReadPosRankSum=6.973;VQSLOD=0.4108;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:18.04:0,18,226	0/1:7,0:7:77.45:77,0,106	0/0:15,0:8:8.19:0,8,170	0/1:7,0:4:20.97:21,0,35	1/1:1,24:25:45.07:1028,45,0	0/1:18,0:18:99:180,0,453	0/1:17,0:15:28.72:29,0,318	0/0:38,0:37:57.60:0,58,1165	1/1:1,12:14:18.06:460,18,0	0/1:17,0:17:44.76:45,0,389	0/1:22,0:22:99:278,0,302	0/0:20,0:19:50.82:0,51,701	1/1:1,9:11:15.05:374,15,0	1/1:2,14:16:18.06:421,18,0	0/1:13,0:13:65.47:65,0,246	1/1:1,9:12:15.05:380,15,0	1/1:5,16:18:36.12:839,36,0	0/1:23,0:21:45.51:46,0,434	0/1:26,0:26:19.18:19,0,858	0/1:26,0:26:72.70:73,0,671	0/0:10,0:8:24.06:0,24,317	0/1:8,10:19:99:410,0,111	0/0:27,0:26:14.24:0,14,657	0/1:11,0:11:27.77:28,0,116	0/1:25,0:25:99:174,0,498	0/0:24,0:24:69.20:0,69,1027	0/1:20,0:19:99:137,0,404	0/0:14,0:14:42.07:0,42,558
chr10	37878596	.	CAAT	C	1031.97	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=6.187;DP=466;FS=0.000;HRun=0;HaplotypeScore=64.8944;InbreedingCoeff=0.9352;MQ=66.21;MQ0=0;MQRankSum=0.992;QD=28.67;ReadPosRankSum=4.123;VQSLOD=3.3571;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,99,2033	0/0:4,0:4:12.03:0,12,223	0/0:4,0:4:6.02:0,6,123	0/0:6,0:6:11.91:0,12,214	0/0:22,0:22:63.17:0,63,1243	0/0:13,0:13:39.13:0,39,817	0/0:12,0:12:36.12:0,36,775	0/0:34,0:34:84.28:0,84,1778	0/0:11,0:11:30.10:0,30,662	0/0:16,0:16:45.15:0,45,993	0/0:20,0:20:54.19:0,54,1173	1/1:0,10:10:24.08:386,24,0	0/0:7,0:7:15.05:0,15,329	0/0:24,0:24:60.19:0,60,1264	0/0:10,0:10:30.08:0,30,617	0/0:13,0:13:39.13:0,39,861	0/0:18,0:18:48.16:0,48,1040	0/0:25,0:25:63.19:0,63,1346	0/0:19,0:19:42.13:0,42,850	0/0:24,0:24:63.22:0,63,1382	0/0:24,0:24:63.20:0,63,1346	0/0:10,0:10:30.10:0,30,645	1/1:1,9:10:24:354,24,0	1/1:0,16:16:27.09:434,27,0	0/0:23,0:23:60.21:0,60,1284	0/0:29,0:29:78.26:0,78,1641	0/0:13,0:13:39.13:0,39,861	0/0:10,0:10:30.10:0,30,660
chr10	37879163	.	GTTAT	G	1924.44	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=4.581;DP=553;FS=2.096;HRun=0;HaplotypeScore=97.2663;InbreedingCoeff=0.9777;MQ=63.85;MQ0=0;MQRankSum=0.717;QD=32.62;ReadPosRankSum=1.159;VQSLOD=3.8234;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:87.25:0,87,2108	0/0:9,0:9:21.07:0,21,542	0/0:11,0:8:18.06:0,18,465	0/0:16,0:15:23.83:0,24,555	0/0:28,0:28:69.12:0,69,1243	0/0:19,0:19:48.16:0,48,1162	0/0:14,0:14:39.13:0,39,1006	0/0:38,0:38:87.26:0,87,2018	0/0:12,0:12:30.10:0,30,570	0/0:24,0:24:66.22:0,66,1597	0/0:26,0:26:72.22:0,72,1685	1/1:3,20:23:48.16:855,48,0	0/0:17,0:17:45.05:0,45,787	0/0:17,0:17:30.10:0,30,567	0/0:19,0:19:48.15:0,48,1111	0/0:21,0:21:54.10:0,54,969	0/0:17,0:17:45.12:0,45,807	0/0:15,0:15:42.14:0,42,1084	0/0:16,0:16:39.11:0,39,937	0/0:25,0:25:66.23:0,66,1645	0/0:15,0:15:45.13:0,45,1021	0/0:14,0:14:33.11:0,33,606	1/1:2,19:21:42.06:747,42,0	1/1:2,13:15:10.14:461,10,0	0/0:22,0:22:57.20:0,57,1446	0/0:24,0:24:63.22:0,63,1627	0/0:19,0:19:48.16:0,48,1233	0/0:22,0:22:60.18:0,60,1465
chr10	37879549	.	G	GA	3795.57	PASS	AB=0.947;AC=15;AF=0.268;AN=56;BaseQRankSum=-8.531;DP=567;FS=8.408;HRun=9;HaplotypeScore=57.0763;InbreedingCoeff=0.9274;MQ=73.34;MQ0=0;MQRankSum=1.342;QD=23.87;ReadPosRankSum=3.063;VQSLOD=4.4260;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:89.88:0,90,775	0/0:9,0:9:26.99:0,27,234	0/0:12,0:12:14.19:0,14,147	0/1:17,0:17:3.94:4,0,153	1/1:3,25:28:78.16:848,78,0	0/0:17,0:17:38.96:0,39,333	0/0:24,0:24:68.92:0,69,586	0/0:24,0:24:50.97:0,51,443	1/1:4,16:20:51.01:546,51,0	0/0:23,0:23:47.98:0,48,416	0/0:22,0:22:53.93:0,54,458	0/0:23,0:23:50.95:0,51,439	1/1:3,20:23:45.59:616,46,0	1/1:1,13:14:30.08:332,30,0	0/0:17,0:17:41.95:0,42,358	1/1:0,11:11:27.07:299,27,0	1/1:5,17:22:48.13:529,48,0	0/0:26,0:26:62.94:0,63,540	0/0:21,0:21:53.47:0,53,436	0/0:19,0:19:50.98:0,51,442	0/0:15,0:15:32.89:0,33,273	1/1:2,19:23:37.08:623,37,0	0/0:20,0:21:49.99:0,50,416	0/0:20,0:19:50.99:0,51,443	0/0:21,0:21:38.43:0,38,322	0/0:15,0:15:26.98:0,27,234	0/0:22,0:22:53.95:0,54,461	0/0:16,1:17:14.77:0,15,347
chr10	37879986	.	AC	A	4862.22	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=11.048;DP=554;FS=10.486;HRun=5;HaplotypeScore=73.8368;InbreedingCoeff=0.9949;MQ=89.97;MQ0=0;MQRankSum=-2.242;QD=26.86;ReadPosRankSum=2.416;VQSLOD=4.2918;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,126,1671	0/0:5,0:5:15.05:0,15,204	0/0:24,1:25:63.12:0,63,787	0/0:23,0:22:44.06:0,44,590	1/1:0,12:12:27.08:305,27,0	0/0:12,0:12:33.11:0,33,451	0/0:20,0:20:48.15:0,48,639	0/0:21,0:21:60.17:0,60,764	1/1:3,16:19:42.12:476,42,0	0/0:27,0:27:72.18:0,72,930	0/0:21,0:21:57.19:0,57,777	1/1:0,14:14:33.09:374,33,0	1/1:2,20:22:38.99:442,39,0	1/1:2,18:20:48.14:545,48,0	0/0:17,0:17:45.15:0,45,614	1/1:0,8:8:15.04:170,15,0	1/1:0,34:34:99:1122,99,0	0/0:17,0:17:51.17:0,51,695	0/0:25,0:25:72.22:0,72,952	0/0:17,0:17:45.15:0,45,614	0/0:29,0:29:84.28:0,84,1148	1/1:0,23:23:57.16:646,57,0	1/1:0,12:12:33.09:374,33,0	1/1:1,16:17:36.10:408,36,0	0/0:21,0:21:57.19:0,57,779	0/0:20,0:20:60.20:0,60,820	0/0:18,0:18:48.16:0,48,654	0/0:12,0:12:33.11:0,33,451
chr10	37880326	.	C	CT	1598.30	PASS	AB=0.916;AC=29;AF=0.518;AN=56;BaseQRankSum=6.048;DP=499;FS=1.607;HRun=16;HaplotypeScore=80.1386;InbreedingCoeff=0.3088;MQ=56.92;MQ0=4;MQRankSum=-1.355;QD=4.63;ReadPosRankSum=-3.842;VQSLOD=0.6902;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:34,0:33:23.61:126,24,0	0/1:11,0:11:9.34:9,0,52	0/0:12,0:7:2.85:0,3,16	0/0:8,0:7:8.53:0,9,45	1/1:9,7:20:27.78:227,28,0	0/0:13,1:15:0.93:0,1,62	0/0:11,0:11:11.25:0,11,66	0/0:21,1:27:3.46:0,3,89	1/1:19,2:20:7.21:136,7,0	0/0:25,0:25:27.57:0,28,157	0/1:15,0:16:2.05:2,0,66	1/1:17,0:17:19.85:164,20,0	1/1:13,1:13:12.31:85,12,0	1/1:13,1:13:4.91:119,5,0	0/1:18,2:20:10.01:10,0,145	1/1:6,1:7:2.41:93,2,0	1/1:18,9:28:17.75:283,18,0	0/0:18,0:20:25.69:0,26,133	0/0:19,1:19:16.29:0,16,97	0/0:12,0:14:2.10:0,2,23	0/1:20,0:21:6.86:7,0,135	0/1:12,3:18:3.30:61,0,3	1/1:17,0:18:28.72:152,29,0	1/1:15,2:16:31.46:168,31,0	0/1:16,0:17:2.28:2,0,69	0/1:19,1:22:13.63:88,0,14	0/1:21,0:23:4.48:4,0,34	0/1:2,4:6:7.76:39,0,8
chr10	37880342	.	T	TTTC	1679.97	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=6.132;DP=511;FS=23.443;HRun=0;HaplotypeScore=108.7224;InbreedingCoeff=0.1839;MQ=61.27;MQ0=4;MQRankSum=-5.504;QD=7.30;ReadPosRankSum=-5.005;VQSLOD=-0.5246;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:24:67.39:134,0,67	0/0:11,0:11:29.62:0,30,283	0/0:16,0:12:16.98:0,17,175	0/0:11,0:10:2.03:0,2,128	0/1:24,0:24:73.01:73,0,224	0/0:14,0:14:33.72:0,34,355	0/0:13,0:13:26.55:0,27,284	0/0:22,0:22:40.85:0,41,502	0/1:21,0:20:21.08:21,0,211	0/0:34,0:34:83.48:0,83,869	0/0:16,0:16:40.05:0,40,397	1/1:13,2:18:25.11:487,25,0	0/1:12,0:11:41.46:41,0,45	0/1:17,0:16:29.92:30,0,100	0/0:22,0:22:62.30:0,62,666	0/1:11,0:11:3.99:4,0,128	0/1:25,0:26:7.01:7,0,222	0/0:20,0:20:56.90:0,57,597	0/0:14,0:13:26.61:0,27,291	0/0:18,0:18:34.32:0,34,308	0/0:26,0:26:23.08:0,23,637	0/0:20,0:20:1.97:0,2,157	1/1:15,3:19:47.92:506,48,0	1/1:7,4:14:33.07:468,33,0	0/0:15,0:15:34.22:0,34,357	0/1:23,0:23:74.37:74,0,275	0/1:19,0:18:1.34:1,0,281	0/0:9,0:9:20.08:0,20,145
chr10	37880400	.	C	CAT	6397.62	PASS	AB=0.582;AC=18;AF=0.321;AN=56;BaseQRankSum=-11.072;DP=509;FS=5.380;HRun=0;HaplotypeScore=64.0587;InbreedingCoeff=0.8380;MQ=73.49;MQ0=0;MQRankSum=-0.165;QD=37.41;ReadPosRankSum=2.703;VQSLOD=7.0839;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:87.28:0,87,1097	0/0:6,0:6:15.05:0,15,189	0/0:15,0:15:23.73:0,24,255	0/0:15,0:15:25.89:0,26,300	1/1:2,14:16:42.14:696,42,0	0/0:12,0:12:33.11:0,33,416	0/0:19,0:19:51.15:0,51,630	0/0:25,0:25:54.16:0,54,660	1/1:0,16:16:42.14:698,42,0	0/0:25,0:25:57.18:0,57,719	0/0:18,0:18:42.13:0,42,529	1/1:3,18:21:54.18:897,54,0	1/1:1,20:21:51.17:847,51,0	1/1:3,19:22:10.30:710,10,0	0/0:19,0:19:48.15:0,48,606	1/1:3,12:15:33.11:548,33,0	1/1:4,15:20:42.13:672,42,0	0/0:15,0:15:39.12:0,39,492	0/0:16,0:16:36.11:0,36,454	0/0:21,0:21:60.19:0,60,756	0/0:28,0:28:78.25:0,78,980	1/1:0,10:11:27.09:449,27,0	0/1:5,9:14:7.76:419,0,8	0/1:3,11:15:39.61:463,0,40	0/0:19,0:19:57.16:0,57,704	0/0:24,0:24:66.20:0,66,821	0/0:17,0:17:51.16:0,51,643	0/0:9,0:9:27.09:0,27,341
chr10	37880538	.	CTGTTT	C	7740.80	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=12.275;DP=687;FS=1.699;HRun=0;HaplotypeScore=138.4169;InbreedingCoeff=0.9989;MQ=76.96;MQ0=0;MQRankSum=-4.587;QD=50.59;ReadPosRankSum=7.719;VQSLOD=4.7596;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,105,3279	0/0:10,0:10:30.10:0,30,994	0/0:20,0:20:54.16:0,54,1605	0/0:23,0:25:41.78:0,42,1916	1/1:0,25:25:33.11:767,33,0	0/0:23,0:23:60.21:0,60,1860	0/0:27,0:27:81.28:0,81,2627	0/0:38,0:38:99:0,111,3705	1/1:0,19:19:54.19:1257,54,0	0/0:32,0:32:96.33:0,96,3147	0/0:15,0:15:42.14:0,42,1397	0/0:26,0:26:78.27:0,78,2589	1/1:0,14:14:33.11:761,33,0	1/1:0,26:26:72.25:1675,72,0	0/0:34,0:34:99:0,102,3362	1/1:0,19:19:48.16:1117,48,0	1/1:0,29:29:66.23:1537,66,0	0/0:17,0:17:51.18:0,51,1650	0/0:30,0:30:87.30:0,87,2893	0/0:24,0:24:66.23:0,66,2199	0/0:36,0:36:99:0,108,3523	1/1:0,21:21:27.09:628,27,0	0/0:20,0:20:60.21:0,60,1909	0/0:34,0:34:99:0,102,3386	0/0:19,0:19:57.20:0,57,1802	0/0:34,0:34:99:0,102,3282	0/0:28,0:27:81.28:0,81,2584	0/0:7,0:7:21.07:0,21,677
chr10	37880996	.	GA	G	11178.79	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=13.279;DP=670;FS=10.785;HRun=1;HaplotypeScore=73.3890;InbreedingCoeff=0.9999;MQ=79.19;MQ0=2;MQRankSum=-2.257;QD=37.14;ReadPosRankSum=6.657;VQSLOD=4.1610;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,48:48:99:1861,135,0	0/0:10,0:10:30.10:0,30,479	0/0:20,0:19:54.61:0,55,760	0/0:33,0:32:36:0,36,1119	1/1:1,27:28:75.25:1034,75,0	0/0:23,0:23:60.20:0,60,948	0/0:30,0:30:87.28:0,87,1337	0/0:18,0:18:51.17:0,51,785	1/1:0,31:31:81.23:1110,81,0	0/0:25,0:25:75.25:0,75,1159	0/0:13,0:13:39.13:0,39,613	1/1:0,20:19:51.12:691,51,0	1/1:1,17:17:51.17:710,51,0	1/1:0,21:20:57.19:797,57,0	0/0:16,0:16:48.16:0,48,747	1/1:0,30:29:78.26:1085,78,0	1/1:0,39:39:99:1381,99,0	0/0:25,0:25:69.13:0,69,1004	0/0:23,0:23:63.67:0,64,945	0/0:19,0:19:57.19:0,57,891	0/0:27,0:27:78.26:0,78,1197	1/1:0,15:15:39.13:545,39,0	1/1:1,21:20:60.20:835,60,0	1/1:0,29:29:81.27:1131,81,0	0/0:30,0:30:87.73:0,88,1313	0/0:18,0:18:51.17:0,51,794	0/0:20,0:20:60.19:0,60,925	0/0:19,0:19:57.19:0,57,911
chr10	37881322	.	CT	C	1861.75	PASS	AB=0.728;AC=43;AF=0.768;AN=56;BaseQRankSum=0.856;DP=444;FS=0.000;HRun=16;HaplotypeScore=67.2878;InbreedingCoeff=0.3855;MQ=66.70;MQ0=6;MQRankSum=-0.907;QD=4.96;ReadPosRankSum=2.108;VQSLOD=1.8439;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:25:28.71:0,29,161	1/1:1,0:2:2.04:6,2,0	0/0:21,0:8:6.21:0,6,38	0/0:12,1:9:2.98:0,3,22	1/1:5,7:12:12.78:74,13,0	1/1:6,7:14:22.54:131,23,0	1/1:6,7:14:13.35:77,13,0	1/1:9,5:14:14.52:90,15,0	1/1:9,7:16:23.21:123,23,0	1/1:15,6:21:20.30:122,20,0	1/1:5,5:11:13.73:78,14,0	1/1:8,0:19:22.34:64,22,0	1/1:9,7:15:16.67:106,17,0	0/1:10,5:15:8.96:59,0,9	0/1:8,4:12:25.97:26,0,34	1/1:8,14:23:18.88:226,19,0	1/1:19,10:39:52.10:255,52,0	1/1:9,5:17:19.94:106,20,0	1/1:13,9:23:5.93:91,6,0	1/1:7,4:11:6.84:38,7,0	0/1:13,10:24:3.36:90,0,3	0/1:3,7:10:10.41:57,0,10	1/1:1,0:10:14.23:41,14,0	1/1:3,0:11:14.23:41,14,0	1/1:7,6:12:10.89:71,11,0	0/1:10,1:13:10.01:10,0,51	1/1:7,2:12:7.64:41,8,0	0/0:7,0:9:8.83:0,9,65
chr10	37881543	.	AG	A	994.97	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.915;DP=580;FS=0.721;HRun=2;HaplotypeScore=63.5048;InbreedingCoeff=0.9432;MQ=88.43;MQ0=0;MQRankSum=-3.205;QD=33.17;ReadPosRankSum=1.026;VQSLOD=3.5438;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,30:30:84.27:1090,84,0	0/0:4,0:4:9.03:0,9,135	0/0:23,0:21:57.19:0,57,855	0/0:28,0:28:72.37:0,72,946	0/0:25,0:24:63.21:0,63,942	0/0:18,0:18:54.18:0,54,804	0/0:31,0:31:90.29:0,90,1329	0/0:32,0:32:93.30:0,93,1373	0/0:16,0:16:48.15:0,48,699	0/0:19,0:19:54.18:0,54,809	0/0:13,0:13:36.12:0,36,538	0/0:25,0:25:72.22:0,72,1055	0/0:13,0:13:39.13:0,39,584	0/0:23,0:23:69.23:0,69,1016	0/0:21,0:21:60.20:0,60,899	0/0:18,0:18:54.17:0,54,789	0/0:31,0:31:93.29:0,93,1371	0/0:24,0:24:72.16:0,72,1029	0/0:24,0:24:69.23:0,69,1016	0/0:22,0:22:51.17:0,51,764	0/0:30,0:30:90.28:0,90,1314	0/0:15,0:15:42.14:0,42,629	0/0:17,0:17:48.15:0,48,700	0/0:21,0:21:63.20:0,63,924	0/0:10,0:10:24.07:0,24,339	0/0:14,0:14:39.12:0,39,566	0/0:17,0:17:48.16:0,48,718	0/0:16,0:16:45.15:0,45,671
chr10	37881868	.	CTCG	C	2467.62	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.876;DP=672;FS=5.419;HRun=0;HaplotypeScore=95.8497;InbreedingCoeff=0.9971;MQ=91.05;MQ0=0;MQRankSum=-2.222;QD=42.55;ReadPosRankSum=3.312;VQSLOD=5.0593;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,138,3108	0/0:6,0:6:18.03:0,18,344	0/0:28,0:28:80.99:0,81,1715	0/0:29,0:29:87.28:0,87,1998	0/0:27,0:27:75.24:0,75,1742	0/0:20,0:20:60.19:0,60,1428	0/0:22,0:22:66.21:0,66,1577	0/0:25,0:25:72.25:0,72,1750	0/0:30,0:30:90.27:0,90,2039	0/0:21,0:21:63.22:0,63,1545	0/0:15,0:15:39.12:0,39,896	1/1:0,16:16:48.12:858,48,0	0/0:14,0:14:42.13:0,42,984	0/0:24,0:24:72.23:0,72,1718	0/0:21,0:21:63.22:0,63,1521	0/0:22,0:22:66.23:0,66,1603	0/0:28,0:28:84.25:0,84,1937	0/0:20,0:20:57.15:0,57,1349	0/0:21,0:21:63.21:0,63,1452	0/0:22,0:22:56.83:0,57,1167	0/0:35,0:35:99:0,105,2380	0/0:28,0:28:81.25:0,81,1889	1/1:0,21:21:54.14:970,54,0	1/1:0,21:21:42.13:783,42,0	0/0:23,0:23:66.18:0,66,1470	0/0:35,0:35:99:0,105,2357	0/0:35,0:35:99:0,105,2489	0/0:17,0:17:51.18:0,51,1256
chr10	37882229	.	T	TACAC	3990.10	PASS	AB=0.949;AC=30;AF=0.536;AN=56;BaseQRankSum=-7.156;DP=645;FS=4.740;HRun=0;HaplotypeScore=195.1488;InbreedingCoeff=0.2614;MQ=65.75;MQ0=8;MQRankSum=-1.533;QD=8.06;ReadPosRankSum=0.603;VQSLOD=2.4595;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:39,0:39:8.98:88,9,0	1/1:5,1:7:9.03:183,9,0	1/1:25,0:20:5.87:39,6,0	0/1:35,0:31:8.61:9,0,48	0/0:23,0:23:4.03:0,4,206	0/1:17,2:18:2.36:221,0,2	1/1:27,1:28:11.67:133,12,0	1/1:23,0:23:18.47:206,18,0	0/0:14,0:14:4.73:0,5,146	1/1:28,4:34:44.36:940,44,0	0/1:15,4:19:5.15:106,0,5	0/0:16,0:16:3.60:0,4,45	0/0:13,0:13:13.63:0,14,164	0/1:14,0:14:0.56:1,0,75	1/1:25,2:26:14.64:221,15,0	0/0:20,0:20:12.67:0,13,309	0/0:25,0:25:9.97:0,10,282	1/1:13,0:16:29.46:414,29,0	0/1:12,0:12:31.58:118,0,32	1/1:21,3:25:20.51:213,21,0	0/1:41,0:42:35.93:291,0,36	0/0:27,0:27:26.87:0,27,263	0/1:17,0:17:16.78:18,0,17	0/1:30,0:30:63.41:63,0,230	0/1:19,1:22:0.05:177,0,0	0/1:24,0:25:37.70:38,0,234	1/1:23,3:27:2.39:514,2,0	0/0:12,0:11:14.98:0,15,125
chr10	37882253	.	CACAT	C	4353.20	PASS	AB=0.994;AC=31;AF=0.554;AN=56;BaseQRankSum=-9.705;DP=775;FS=3.006;HRun=0;HaplotypeScore=213.8199;InbreedingCoeff=-0.5301;MQ=47.40;MQ0=20;MQRankSum=2.718;QD=5.93;ReadPosRankSum=-10.029;VQSLOD=1.3711;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:38,0:38:66.09:66,0,77	0/1:11,0:10:11.03:11,0,95	0/1:26,0:10:28.43:28,0,40	0/1:30,0:12:10.62:11,0,69	0/1:27,0:27:99:226,0,152	0/1:25,0:24:84.58:120,0,85	0/1:31,0:30:16.71:31,0,17	0/1:23,0:23:91.74:251,0,92	0/1:20,0:20:99:162,0,110	0/1:45,0:42:99:236,0,386	0/1:28,0:28:36.35:56,0,36	1/1:24,0:24:30.21:233,30,0	0/1:14,0:14:99:121,0,144	0/1:17,1:18:78.85:95,0,79	0/0:30,0:29:13.54:0,14,149	0/1:30,0:29:99:193,0,274	0/1:23,1:24:99:127,0,244	0/1:25,0:23:55.26:55,0,165	0/0:11,0:10:4.43:0,4,167	0/1:27,0:27:17.72:99,0,18	0/1:64,0:62:52.24:52,0,163	0/1:28,1:29:99:194,0,229	1/1:22,1:23:24.29:192,24,0	1/1:45,3:48:57.78:615,58,0	0/1:29,0:29:51.21:51,0,115	1/1:21,7:27:39.48:774,39,0	0/1:29,0:28:72.95:73,0,242	1/1:1,17:17:15.05:282,15,0
chr10	37882255	.	CAT	C	5002.26	PASS	AB=0.957;AC=34;AF=0.607;AN=56;BaseQRankSum=-8.611;DP=776;FS=3.068;HRun=0;HaplotypeScore=199.8366;InbreedingCoeff=-0.4407;MQ=48.10;MQ0=19;MQRankSum=3.990;QD=6.71;ReadPosRankSum=-9.076;VQSLOD=2.2876;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:44,1:45:3.60:90,4,0	0/1:11,0:10:11.82:12,0,22	0/1:26,0:11:26.29:26,0,61	0/1:29,0:11:10.62:11,0,69	0/1:25,2:27:0.82:321,0,1	0/1:25,0:24:34.22:144,0,34	0/1:31,1:31:2.93:31,0,3	0/1:5,17:22:38.20:288,0,38	0/1:18,2:20:9.25:225,0,9	0/1:43,0:41:79.14:275,0,79	0/1:29,0:29:15.42:56,0,15	1/1:21,2:23:34.96:306,35,0	0/1:14,0:14:29.87:122,0,30	0/1:18,0:18:2.94:118,0,3	0/0:30,0:29:12.53:0,13,70	0/1:31,0:30:18.32:299,0,18	0/1:22,1:23:31.13:190,0,31	0/1:25,0:23:32.17:75,0,32	0/1:10,1:10:13.41:13,0,65	1/1:27,0:27:9.21:127,9,0	0/1:59,1:59:54.63:55,0,89	0/1:26,3:29:17.73:259,0,18	1/1:18,5:23:26.49:246,26,0	1/1:41,8:49:92.44:964,92,0	0/1:28,0:28:44.09:52,0,44	1/1:27,1:27:64.10:513,64,0	0/1:29,0:28:66.32:66,0,91	1/1:18,0:17:14.96:117,15,0
chr10	37882257	.	T	TAC	4407.54	PASS	AB=0.861;AC=27;AF=0.482;AN=56;BaseQRankSum=-4.991;DP=779;FS=3.058;HRun=0;HaplotypeScore=209.5058;InbreedingCoeff=0.2970;MQ=49.18;MQ0=19;MQRankSum=-2.508;QD=8.59;ReadPosRankSum=-4.562;VQSLOD=3.9436;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:42,3:45:27.06:294,27,0	1/1:7,3:9:11.74:183,12,0	0/0:24,0:9:5.82:0,6,102	0/0:28,0:10:12.01:0,12,128	0/1:28,0:28:43.70:44,0,117	0/1:22,2:23:31.54:228,0,32	0/1:11,21:32:4.11:25,0,4	1/1:22,0:22:47.47:563,47,0	0/0:20,0:20:7.25:0,7,98	1/1:14,27:40:73.30:1088,73,0	0/0:15,13:28:3.40:0,3,25	0/0:24,0:24:5.28:0,5,24	0/0:15,0:15:14.45:0,14,110	0/1:19,0:19:46.13:47,0,46	1/1:12,18:29:11.99:188,12,0	0/0:31,0:30:26.51:0,27,209	0/0:21,0:21:28.91:0,29,191	0/1:11,14:24:3.67:309,0,4	0/1:11,0:10:15.14:92,0,15	1/1:13,14:27:5.37:63,5,0	1/1:26,35:61:9.50:142,9,0	0/1:32,0:32:16.73:17,0,127	0/0:24,0:24:3.19:0,3,13	0/0:50,0:50:34.36:0,34,144	0/1:9,20:29:27.30:84,0,27	0/1:26,0:26:2.94:547,0,3	1/1:9,19:27:32.88:418,33,0	1/1:18,0:17:14.32:75,14,0
chr10	37882356	.	T	TCACA	2992.95	PASS	AB=1.000;AC=24;AF=0.429;AN=56;BaseQRankSum=-0.056;DP=620;FS=6.652;HRun=0;HaplotypeScore=190.4278;InbreedingCoeff=0.0474;MQ=45.91;MQ0=14;MQRankSum=1.685;QD=7.75;ReadPosRankSum=-1.076;VQSLOD=1.9258;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:81:0,81,1103	0/0:3,0:3:3.01:0,3,33	0/0:29,0:7:4.26:0,4,50	0/1:26,0:8:0.84:1,0,18	0/0:7,7:16:2.82:0,3,46	0/1:14,0:14:14.80:15,0,40	0/0:21,0:16:20.59:0,21,209	0/0:32,0:28:54.07:0,54,574	1/1:8,12:22:25.89:458,26,0	0/1:16,0:14:78.10:78,0,138	0/0:9,0:9:9.01:0,9,100	0/1:26,0:26:93.16:93,0,296	1/1:21,3:23:33.84:508,34,0	1/1:19,5:25:13.99:249,14,0	0/0:30,0:29:1.81:0,2,106	1/1:15,7:23:7.36:618,7,0	1/1:13,2:14:27.07:501,27,0	0/1:11,0:11:72.12:72,0,121	0/1:14,0:14:24.59:25,0,184	0/0:13,0:13:12.01:0,12,123	0/0:34,0:33:21.02:0,21,213	1/1:17,3:19:17.36:266,17,0	0/1:42,0:42:99:112,0,609	0/1:54,0:51:10.04:10,0,498	0/1:14,0:14:66.15:66,0,136	0/1:17,0:17:30.40:30,0,188	0/1:11,0:10:50.63:51,0,170	0/1:11,0:10:19.20:19,0,72
chr10	37882367	.	CAG	C	1196.24	PASS	AB=0.991;AC=27;AF=0.482;AN=56;BaseQRankSum=-6.015;DP=655;FS=0.466;HRun=0;HaplotypeScore=181.0775;InbreedingCoeff=-0.6132;MQ=45.57;MQ0=23;MQRankSum=2.572;QD=1.95;ReadPosRankSum=-6.677;VQSLOD=0.2195;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:50,2:52:99:195,0,178	0/1:4,0:4:39.21:41,0,39	0/1:28,0:4:11.48:11,0,21	0/1:23,0:3:0.84:1,0,18	0/1:19,0:19:11.15:80,0,11	0/0:12,0:12:6:0,6,55	0/1:25,0:20:87.90:88,0,151	0/1:24,6:22:24.89:25,0,421	0/1:26,0:26:41.46:86,0,41	0/1:16,0:13:51.89:52,0,155	0/1:10,0:10:10.59:11,0,68	0/1:27,0:26:13.55:14,0,58	1/1:24,0:22:22.25:212,22,0	0/1:24,0:24:30.23:30,0,71	0/1:31,0:30:29.43:29,0,99	0/1:23,0:23:56.59:92,0,57	0/1:14,0:13:10.29:57,0,10	0/1:11,0:11:32.43:32,0,69	0/1:11,0:11:6.11:6,0,123	0/1:16,0:14:29.24:29,0,91	0/1:35,0:32:39.15:39,0,143	1/1:21,0:19:9.37:98,9,0	0/1:50,0:50:51.83:52,0,147	0/1:61,0:58:10.55:11,0,123	0/1:16,0:16:25.25:25,0,126	0/0:16,0:15:5.83:0,6,265	0/1:15,0:14:34.95:35,0,127	0/0:15,0:14:9.01:0,9,91
chr10	37882369	.	GACAC	G	1106.39	PASS	AB=0.659;AC=4;AF=0.074;AN=54;BaseQRankSum=-1.123;DP=670;FS=4.801;HRun=0;HaplotypeScore=197.6325;InbreedingCoeff=-0.0619;MQ=45.73;MQ0=23;MQRankSum=-0.313;QD=5.70;ReadPosRankSum=2.062;VQSLOD=2.5409;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:27,3:55:99:118,0,230	0/0:4,0:4:3.01:0,3,47	0/0:27,0:3:6.89:0,7,31	./.	0/0:18,0:18:9.96:0,10,119	0/0:4,0:13:3.01:0,3,32	0/0:26,0:21:4.61:0,5,78	0/0:28,0:20:9.47:0,9,107	0/0:27,0:27:27:0,27,415	0/0:17,0:14:17.51:0,18,250	0/0:11,0:10:0:0,0,0	0/1:13,15:27:99:252,0,239	0/0:24,0:22:36.07:0,36,576	0/0:25,0:25:26.82:0,27,441	0/0:32,0:31:6.02:0,6,84	0/0:25,0:25:36.59:0,37,652	0/0:15,0:14:30.07:0,30,444	0/0:12,0:12:16.39:0,16,126	0/0:11,0:11:5.99:0,6,64	0/0:15,0:13:6:0,6,84	0/0:36,0:33:4.07:0,4,49	0/0:21,0:19:22.94:0,23,312	0/1:24,26:50:99:478,0,394	0/1:29,31:58:61.28:364,0,61	0/0:17,0:17:9.96:0,10,133	0/0:7,0:18:35.43:0,35,396	0/0:14,0:14:20.95:0,21,285	0/0:3,0:15:6.02:0,6,89
chr10	37882471	.	T	TACACAC	5142.52	PASS	AB=0.974;AC=36;AF=0.692;AN=52;BaseQRankSum=3.032;DP=829;FS=0.000;HRun=0;HaplotypeScore=260.6654;InbreedingCoeff=-0.0638;MQ=41.94;MQ0=58;MQRankSum=-4.425;QD=7.29;ReadPosRankSum=-1.275;VQSLOD=3.3358;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:56,0:53:72.36:112,0,72	0/1:16,0:16:99:127,0,198	./.	./.	1/1:20,0:20:5.72:49,6,0	0/1:27,0:27:54.91:55,0,309	0/1:36,0:32:99:137,0,525	0/1:30,0:14:8.96:174,0,9	1/1:26,3:30:19.49:332,19,0	0/1:40,0:35:99:181,0,150	0/0:20,0:20:12.47:0,12,170	1/1:20,0:24:14.46:185,14,0	1/1:19,2:21:18.03:380,18,0	1/1:28,2:32:34.95:790,35,0	0/1:32,1:39:99:113,0,469	1/1:16,3:20:17.74:389,18,0	1/1:16,0:16:14.99:246,15,0	0/1:24,0:25:99:171,0,218	1/1:15,0:8:3.01:59,3,0	0/1:30,0:30:46.25:46,0,236	0/0:47,0:43:16.84:0,17,1091	1/1:17,0:18:13.95:225,14,0	0/1:35,0:31:0.01:0,0,1	1/1:50,1:54:4.44:76,4,0	0/1:27,0:27:2.97:281,0,3	1/1:21,0:21:18.03:413,18,0	0/1:31,0:32:99:303,0,104	1/1:13,0:14:12.04:301,12,0
chr10	37882572	.	G	GTA	919.58	PASS	AC=28;AF=0.538;AN=52;BaseQRankSum=-3.812;DP=397;FS=2.161;HRun=0;HaplotypeScore=70.1535;InbreedingCoeff=0.7763;MQ=44.91;MQ0=65;MQRankSum=1.276;QD=7.73;ReadPosRankSum=-3.836;VQSLOD=2.6106;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:7.34:0,7,249	1/1:2,0:3:5.99:49,6,0	0/0:36,0:2:6.02:0,6,84	0/0:24,0:2:3:0,3,27	0/0:10,0:10:17.96:0,18,145	1/1:2,9:10:3.01:52,3,0	1/1:12,0:8:17.91:139,18,0	1/1:18,2:9:14.90:110,15,0	0/0:28,0:27:56.91:0,57,462	1/1:11,1:8:15.06:123,15,0	1/1:5,0:5:8.92:67,9,0	1/1:1,0:1:1.82:5,2,0	0/0:22,0:22:47.86:0,48,381	0/0:26,0:24:53.76:0,54,420	1/1:6,0:6:8.99:74,9,0	0/0:22,0:22:41.82:0,42,327	0/0:17,0:16:41.92:0,42,337	1/1:4,1:5:11.95:105,12,0	1/1:7,0:2:5.60:36,6,0	1/1:1,8:9:3.01:52,3,0	1/1:19,0:14:21.41:168,21,0	0/0:23,0:22:41.73:0,42,333	./.	./.	1/1:0,3:3:3.01:52,3,0	0/0:26,0:23:57.06:0,57,646	1/1:6,0:6:11.75:82,12,0	0/0:14,0:12:17.36:0,17,442
chr10	37882575	.	TAC	T	2572.53	PASS	AC=14;AF=0.269;AN=52;BaseQRankSum=-0.366;DP=467;FS=4.735;HRun=0;HaplotypeScore=80.5934;InbreedingCoeff=0.6861;MQ=44.20;MQ0=58;MQRankSum=2.985;QD=16.60;ReadPosRankSum=5.049;VQSLOD=3.0420;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,1:31:15.33:0,15,457	./.	0/0:34,0:3:6.02:0,6,94	0/0:23,0:2:3.01:0,3,35	1/1:3,7:11:9.33:85,9,0	0/0:14,0:13:3:0,3,28	0/0:15,0:11:6.01:0,6,61	0/0:18,0:8:7.22:0,7,48	1/1:9,22:30:42.12:492,42,0	0/0:11,0:7:8.95:0,9,74	0/0:8,0:8:5.96:0,6,44	0/0:8,0:7:2.98:0,3,21	1/1:3,20:23:39.12:457,39,0	1/1:4,21:24:50.94:561,51,0	0/0:14,0:12:1.91:0,2,30	1/1:5,18:23:33.01:356,33,0	1/1:8,9:16:36.04:393,36,0	0/0:6,0:6:5.93:0,6,40	0/0:10,0:4:8.89:0,9,64	0/0:9,0:9:6:0,6,52	./.	1/1:2,22:23:35.43:406,35,0	0/0:4,0:4:5.96:0,6,44	0/0:14,0:9:6.01:0,6,63	0/0:6,0:6:6.01:0,6,59	0/0:29,1:27:24.94:0,25,746	0/0:11,0:10:8.93:0,9,65	0/0:18,0:16:48.07:0,48,655
chr10	37882627	.	C	CAGAG	101.08	PASS	AB=0.930;AC=4;AF=0.071;AN=56;BaseQRankSum=4.577;DP=609;FS=1.316;HRun=0;HaplotypeScore=152.3452;InbreedingCoeff=-0.0781;MQ=53.95;MQ0=4;MQRankSum=-2.161;QD=1.10;ReadPosRankSum=-3.460;VQSLOD=1.9529;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:35,22:46:99:146,0,799	0/0:4,0:4:9.03:0,9,158	0/0:40,0:31:80.07:0,80,1341	0/0:45,0:26:59.45:0,59,881	0/0:12,0:12:23.64:0,24,409	0/0:18,0:16:38.60:0,39,653	0/0:14,0:14:30.02:0,30,513	0/0:31,0:29:75.25:0,75,1319	0/0:25,0:25:48.16:0,48,881	0/0:14,0:14:30.49:0,30,654	0/0:12,0:12:30.10:0,30,551	0/0:14,2:14:18.64:0,19,379	0/0:27,0:27:57.16:0,57,976	0/0:24,0:24:60.19:0,60,1094	0/0:14,0:11:12.87:0,13,209	0/0:24,0:24:48.16:0,48,843	0/1:14,0:14:37.02:37,0,495	0/1:7,0:7:9.98:10,0,153	0/0:18,0:14:33.10:0,33,575	0/0:17,0:17:45.10:0,45,787	0/0:25,0:21:45.14:0,45,767	0/0:23,0:22:42.13:0,42,740	0/0:12,0:11:21.07:0,21,384	0/0:21,10:22:20.26:0,20,385	0/1:14,0:14:12.81:13,0,565	0/0:24,0:24:60.01:0,60,995	0/0:19,0:18:48.59:0,49,846	0/0:27,0:25:66.08:0,66,1094
chr10	37882674	.	T	TCACA	3038.58	PASS	AC=46;AF=0.885;AN=52;BaseQRankSum=-4.729;DP=659;FS=0.000;HRun=0;HaplotypeScore=183.2545;InbreedingCoeff=0.4505;MQ=42.93;MQ0=28;MQRankSum=1.998;QD=5.74;ReadPosRankSum=-0.096;VQSLOD=2.5179;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:48,0:43:8.48:238,8,0	1/1:13,0:12:9.01:139,9,0	./.	./.	0/0:14,0:14:0.47:0,0,1	1/1:26,0:25:4.90:59,5,0	1/1:35,0:31:10.65:122,11,0	1/1:19,0:16:5.99:61,6,0	1/1:28,0:29:16.94:210,17,0	1/1:32,0:28:23.38:199,23,0	1/1:21,0:21:2.50:9,2,0	1/1:11,2:15:8.82:120,9,0	1/1:16,0:16:2.93:23,3,0	1/1:14,0:15:5.94:118,6,0	1/1:15,0:13:9:112,9,0	1/1:23,0:24:5.71:103,6,0	1/1:17,0:17:7.29:149,7,0	1/1:11,0:11:6.38:76,6,0	1/1:11,0:10:0.47:1,0,0	1/1:27,0:25:6.02:86,6,0	1/1:38,1:34:23.93:452,24,0	1/1:21,1:20:13.33:249,13,0	1/1:16,5:21:7.50:146,7,0	0/0:24,1:22:2.63:0,3,33	1/1:25,0:26:17.20:188,17,0	1/1:19,0:19:0.89:2,1,0	1/1:23,0:23:17.75:289,18,0	0/0:11,0:16:18.02:0,18,167
chr10	37883757	.	C	CT	867.95	PASS	AB=0.713;AC=9;AF=0.161;AN=56;BaseQRankSum=-5.966;DP=594;FS=0.572;HRun=14;HaplotypeScore=72.2410;InbreedingCoeff=0.1488;MQ=69.59;MQ0=11;MQRankSum=0.645;QD=5.46;ReadPosRankSum=1.557;VQSLOD=2.4426;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:33:34.55:0,35,100	0/0:4,0:4:8.83:0,9,56	0/0:62,0:24:21.31:0,21,126	0/0:35,0:12:2.85:0,3,19	0/0:10,0:21:16.31:0,16,47	0/1:20,3:22:41.33:41,0,152	0/1:11,8:20:29.86:119,0,30	0/0:25,0:24:23.35:0,23,142	0/0:4,0:9:6.86:0,7,21	0/0:18,0:18:29.12:0,29,169	0/0:17,0:17:35.14:0,35,208	0/1:4,8:12:4.27:91,0,4	0/0:10,0:13:12.70:0,13,39	0/0:4,0:16:15.10:0,15,43	0/0:14,1:17:2.13:0,2,133	0/0:3,0:15:15.17:0,15,54	0/0:10,0:39:41.95:0,42,131	0/1:15,1:17:3.59:4,0,88	0/0:27,0:29:8.90:0,9,159	0/0:16,1:17:20.15:0,20,134	0/0:13,0:13:24.79:0,25,154	0/0:4,0:10:8.89:0,9,28	0/1:7,8:15:7.27:67,0,7	1/1:4,27:31:38.99:343,39,0	0/0:14,0:14:19.52:0,20,166	0/1:9,14:24:2.02:254,0,2	0/0:23,1:21:0.10:0,0,126	0/1:6,10:16:17.45:88,0,17
chr10	37883900	.	ATG	A	64.66	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=0.650;DP=494;FS=15.734;HRun=0;HaplotypeScore=139.9699;InbreedingCoeff=0.5715;MQ=53.89;MQ0=13;MQRankSum=-0.823;QD=2.94;ReadPosRankSum=-0.603;VQSLOD=1.6469;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:7,15:22:12.04:150,12,0	0/0:8,0:8:6.02:0,6,98	0/0:23,0:14:23.26:0,23,238	0/0:22,0:12:18.27:0,18,295	0/0:27,0:24:42.14:0,42,681	0/0:24,0:24:35.10:0,35,562	0/0:18,0:18:24.08:0,24,388	0/0:31,0:24:43.27:0,43,604	0/0:19,0:18:24.07:0,24,375	0/0:26,0:25:63.14:0,63,974	0/0:13,0:13:12.03:0,12,173	0/0:14,0:13:15.05:0,15,244	0/0:9,0:9:18.06:0,18,284	0/0:12,0:12:8.97:0,9,134	0/0:9,0:9:8.94:0,9,145	0/0:4,0:4:3.01:0,3,50	0/0:20,0:20:35.38:0,35,477	0/0:15,0:15:29.28:0,29,422	0/0:30,1:27:41.48:0,41,687	0/0:20,0:20:19.60:0,20,301	0/0:17,0:13:6.02:0,6,99	0/0:15,1:16:27.09:0,27,441	0/0:17,0:17:24.06:0,24,358	0/0:18,0:18:18.06:0,18,292	0/0:15,0:15:11.97:0,12,198	0/0:25,0:26:72.19:0,72,1128	0/0:9,0:9:15.05:0,15,247	0/0:9,0:9:24.08:0,24,396
chr10	37883928	.	A	ATG	2687.10	PASS	AB=0.896;AC=24;AF=0.462;AN=52;BaseQRankSum=-2.881;DP=598;FS=0.000;HRun=0;HaplotypeScore=162.7083;InbreedingCoeff=0.3035;MQ=37.45;MQ0=64;MQRankSum=-0.887;QD=7.55;ReadPosRankSum=2.664;VQSLOD=3.1964;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,4:24:1.35:0,1,4	1/1:8,1:9:3.90:47,4,0	./.	./.	0/0:29,0:27:30.25:0,30,353	1/1:16,1:16:10.03:188,10,0	1/1:25,2:17:12.02:172,12,0	0/1:30,0:11:26.48:64,0,26	0/0:28,0:29:4.99:0,5,243	0/1:31,9:27:14.96:638,0,15	1/1:4,6:10:9.03:148,9,0	0/1:14,4:15:38.42:38,0,167	0/0:16,0:15:20.94:0,21,223	0/0:13,0:17:11.54:0,12,87	1/1:21,2:19:8.96:57,9,0	0/0:11,0:10:5.83:0,6,74	0/0:23,0:21:7.26:0,7,205	0/1:17,2:17:1.87:263,0,2	0/1:23,5:21:0.75:362,0,1	1/1:16,5:20:10.76:152,11,0	0/1:32,2:19:17.87:40,0,18	0/0:19,0:20:21.06:0,21,258	0/0:18,1:18:11.84:0,12,153	0/0:30,1:28:8.88:0,9,114	1/1:16,3:18:11.37:195,11,0	0/1:33,1:31:11.98:260,0,12	0/1:11,2:11:20.11:107,0,20	1/1:14,0:13:22.19:130,22,0
chr10	37883938	.	GTA	G	1107.66	PASS	AB=0.943;AC=27;AF=0.519;AN=52;BaseQRankSum=0.094;DP=611;FS=1.877;HRun=0;HaplotypeScore=202.0050;InbreedingCoeff=-0.2512;MQ=35.86;MQ0=73;MQRankSum=0.194;QD=2.22;ReadPosRankSum=-4.673;VQSLOD=1.7530;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:2.21:0,2,13	1/1:8,2:10:3.46:24,3,0	./.	./.	0/1:29,0:25:41.67:42,0,44	0/1:9,7:15:13.54:51,0,14	1/1:28,1:19:2.07:24,2,0	0/1:30,0:7:50.77:51,0,66	0/1:32,0:30:68.87:69,0,74	0/1:47,1:32:85.91:176,0,86	0/1:11,2:11:1.02:16,0,1	0/0:18,0:14:21.03:0,21,273	0/1:20,0:19:8.02:103,0,8	1/1:17,0:17:13.36:87,13,0	1/1:23,2:21:4.89:31,5,0	1/1:14,0:12:11.16:53,11,0	0/1:27,0:25:63.71:154,0,64	0/1:18,3:19:75.68:91,0,76	0/1:20,1:17:43.79:71,0,44	0/1:17,3:18:10.85:11,0,47	0/1:38,1:22:17.33:17,0,18	0/1:20,0:19:23.44:65,0,23	0/0:18,0:17:13.76:0,14,230	0/0:30,0:27:9.01:0,9,140	1/1:20,3:20:1.74:28,2,0	0/1:32,0:28:34.37:34,0,217	0/1:13,1:12:12.24:64,0,12	0/0:14,0:13:10.98:0,11,106
chr10	37883940	.	ATG	A	1807.06	PASS	AB=0.905;AC=20;AF=0.385;AN=52;BaseQRankSum=-5.146;DP=627;FS=3.906;HRun=0;HaplotypeScore=211.1635;InbreedingCoeff=0.5132;MQ=35.60;MQ0=74;MQRankSum=4.026;QD=6.13;ReadPosRankSum=-4.646;VQSLOD=2.1597;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:25:0.38:3,0,0	1/1:10,0:10:0.45:1,0,0	./.	./.	1/1:24,7:27:26.69:309,27,0	0/0:16,0:15:4.65:0,5,26	0/0:28,0:19:7.97:0,8,48	0/0:31,0:7:6.03:0,6,98	0/1:26,7:30:18.57:248,0,19	0/0:42,0:34:25.60:0,26,377	0/0:10,0:13:5.87:0,6,47	0/0:20,0:16:17.81:0,18,183	1/1:16,5:19:30.55:358,31,0	1/1:11,6:17:14.86:185,15,0	0/1:22,0:21:0.74:1,0,1	1/1:12,3:13:14.96:176,15,0	0/1:19,7:25:58.78:414,0,59	0/0:20,0:21:36.07:0,36,213	0/0:17,0:17:24.03:0,24,169	0/0:16,0:18:12.64:0,13,85	1/1:38,0:22:0.17:0,0,0	1/1:14,6:19:21.07:265,21,0	0/0:19,0:18:13.28:0,13,173	0/0:30,0:27:11.93:0,12,132	0/0:22,0:22:7.41:0,7,58	0/1:29,0:26:10.52:11,0,131	0/0:12,0:12:7.25:0,7,70	0/0:14,0:13:8.53:0,9,31
chr10	37883944	.	G	GTA	542.84	PASS	AB=0.977;AC=16;AF=0.308;AN=52;BaseQRankSum=3.642;DP=627;FS=2.178;HRun=0;HaplotypeScore=221.9677;InbreedingCoeff=-0.0106;MQ=35.20;MQ0=78;MQRankSum=-1.764;QD=1.70;ReadPosRankSum=3.257;VQSLOD=2.3199;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:20,3:23:1.10:51,1,0	0/0:11,0:11:1.95:0,2,9	./.	./.	0/0:31,0:27:34.95:0,35,230	0/1:17,0:16:18.55:63,0,19	1/1:29,0:19:8.91:62,9,0	0/0:30,0:5:11.76:0,12,113	0/1:26,6:29:58.51:59,0,118	0/1:52,0:34:99:162,0,203	0/1:15,0:13:10.88:35,0,11	0/1:21,0:16:6.85:7,0,147	0/0:20,0:19:34.85:0,35,231	0/0:19,1:18:15.23:0,15,97	0/1:24,0:21:1.62:2,0,10	0/0:15,0:13:14.40:0,14,90	0/0:26,0:24:22.32:0,22,237	0/1:22,0:20:68.49:68,0,105	0/1:22,0:17:58:58,0,101	1/1:19,2:19:1.45:90,1,0	0/0:41,0:22:4.72:0,5,16	0/0:17,0:16:20.52:0,21,125	0/0:19,0:18:12.81:0,13,177	0/0:31,1:29:17.35:0,17,171	0/1:27,0:23:21.01:21,0,22	0/0:30,0:26:54.85:0,55,888	0/1:12,1:11:11.78:12,0,44	0/0:14,0:13:36.10:0,36,483
chr10	37883948	.	G	GTA	960.71	PASS	AB=0.951;AC=18;AF=0.346;AN=52;BaseQRankSum=6.693;DP=629;FS=0.568;HRun=0;HaplotypeScore=221.9035;InbreedingCoeff=-0.0558;MQ=34.87;MQ0=80;MQRankSum=-4.209;QD=2.58;ReadPosRankSum=0.255;VQSLOD=2.5747;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:23:1.14:14,1,0	0/0:11,1:12:0.83:0,1,3	./.	./.	0/0:30,0:26:24.43:0,24,203	0/1:16,1:16:0.85:81,0,1	1/1:29,0:18:8.88:62,9,0	0/0:34,0:6:10.85:0,11,101	0/1:27,4:28:71.50:72,0,75	0/1:53,0:35:45.82:326,0,46	0/1:15,0:13:11.30:34,0,11	0/1:20,1:16:35.47:35,0,147	0/0:18,3:19:19.79:0,20,172	0/0:17,3:18:14.93:0,15,101	0/1:23,1:21:2.65:3,0,6	0/0:16,0:14:14.63:0,15,99	0/1:25,1:24:11.38:11,0,269	0/1:20,2:20:10.88:263,0,11	0/1:20,0:15:61.11:61,0,97	1/1:21,0:19:1.37:52,1,0	0/0:42,0:23:4.72:0,5,16	0/0:17,0:16:9.41:0,9,92	0/0:17,2:18:12.85:0,13,178	0/1:26,5:29:39.30:39,0,76	0/1:24,2:22:14.19:24,0,14	0/0:32,0:27:57.87:0,58,923	0/1:11,0:9:13.45:33,0,13	0/0:14,0:13:36.10:0,36,487
chr10	37883952	.	GTA	G	1167.37	PASS	AB=0.958;AC=28;AF=0.538;AN=52;BaseQRankSum=1.774;DP=634;FS=2.482;HRun=0;HaplotypeScore=220.4408;InbreedingCoeff=-0.0191;MQ=35.27;MQ0=79;MQRankSum=0.370;QD=2.42;ReadPosRankSum=-3.060;VQSLOD=2.2287;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:25:2.51:18,3,0	1/1:9,2:11:0.47:1,0,0	./.	./.	0/1:28,0:24:24.63:78,0,25	1/1:14,4:17:19.04:124,19,0	1/1:30,0:19:8.86:52,9,0	0/0:31,0:5:10.12:0,10,53	0/1:31,0:28:42.19:88,0,42	0/1:51,1:36:99:216,0,145	0/1:14,1:13:20.05:20,0,21	0/0:20,0:15:5.63:0,6,81	0/1:21,0:19:8.90:114,0,9	0/1:21,0:19:28.79:55,0,29	1/1:22,2:21:2.93:17,3,0	1/1:16,0:14:11:53,11,0	0/1:27,0:25:99:132,0,160	0/1:22,2:22:74.62:88,0,75	0/1:19,1:14:33.61:36,0,34	0/1:18,3:19:14.23:14,0,62	1/1:40,0:21:6.25:49,6,0	1/1:17,0:16:19.92:109,20,0	0/0:19,0:18:13.43:0,13,86	0/0:31,1:29:14.95:0,15,146	0/1:24,3:23:1.76:33,0,2	0/0:34,0:29:37.84:0,38,575	0/1:11,1:10:30.55:35,0,31	0/0:16,0:15:38.82:0,39,325
chr10	37883954	.	A	ATGTG	1965.92	PASS	AB=0.979;AC=28;AF=0.538;AN=52;BaseQRankSum=0.717;DP=635;FS=2.709;HRun=0;HaplotypeScore=240.7313;InbreedingCoeff=0.0596;MQ=35.34;MQ0=78;MQRankSum=-3.761;QD=4.04;ReadPosRankSum=-1.221;VQSLOD=2.4439;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:26:1.18:1,0,2	0/0:10,1:11:0.89:0,1,2	./.	./.	0/1:24,0:22:26.70:27,0,214	1/1:15,2:16:5.45:45,5,0	1/1:28,3:20:5.88:27,6,0	0/1:32,0:7:0.99:151,0,1	0/1:26,0:27:67:67,0,166	0/1:48,6:37:19.92:639,0,20	1/1:15,0:13:2.03:6,2,0	0/1:18,0:14:21.05:184,0,21	0/1:21,0:19:29.26:29,0,329	0/0:19,0:19:1.36:0,1,202	1/1:20,4:21:1.31:64,1,0	0/0:15,0:14:11.96:0,12,182	0/0:26,0:25:17.79:0,18,689	0/1:22,3:23:42.07:346,0,42	1/1:16,1:11:11.93:133,12,0	0/0:16,4:18:2.32:0,2,27	1/1:40,2:23:1.79:5,2,0	0/1:16,0:16:27.10:27,0,184	1/1:18,0:17:11.05:152,11,0	0/1:29,0:29:46.63:47,0,93	1/1:25,1:22:6.65:32,7,0	0/0:34,0:29:46.03:0,46,867	1/1:9,3:10:6.08:136,6,0	0/0:17,0:16:40.27:0,40,603
chr10	37883964	.	GTA	G	714.73	PASS	AB=0.959;AC=26;AF=0.464;AN=56;BaseQRankSum=2.308;DP=672;FS=0.000;HRun=0;HaplotypeScore=212.0683;InbreedingCoeff=-0.0649;MQ=34.10;MQ0=85;MQRankSum=-5.059;QD=1.36;ReadPosRankSum=-6.075;VQSLOD=0.0167;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:28:0.59:1,0,1	0/1:9,2:11:0:0,0,1	0/1:15,0:3:17.29:20,0,17	0/1:22,0:5:21.18:21,0,46	0/1:24,0:20:5.56:6,0,228	1/1:10,3:12:4.38:26,4,0	0/1:32,2:23:0.92:75,0,1	1/1:45,0:16:18.63:183,19,0	0/1:29,0:26:13.52:14,0,189	0/1:50,1:35:89.66:128,0,90	0/0:12,1:11:1.99:0,2,20	0/1:19,2:16:30.23:30,0,65	0/1:22,0:20:5.89:6,0,286	0/0:20,0:18:5.42:0,5,243	1/1:21,2:20:3.05:29,3,0	0/0:15,0:13:12.04:0,12,153	0/0:30,0:28:33.25:0,33,688	0/1:23,2:23:88.67:90,0,89	0/1:17,1:10:9.15:55,0,9	0/0:14,3:15:6.84:0,7,86	1/1:39,0:19:0.60:3,1,0	0/1:15,0:14:2.10:2,0,148	1/1:18,2:19:8.52:73,9,0	0/1:33,1:31:27.93:28,0,131	0/1:21,3:20:2.16:33,0,2	0/0:33,0:28:50.03:0,50,1019	0/1:11,1:10:11.95:45,0,12	0/0:17,0:16:41.70:0,42,660
chr10	37883966	.	A	ATG	1988.49	PASS	AB=0.867;AC=25;AF=0.446;AN=56;BaseQRankSum=1.200;DP=673;FS=5.544;HRun=0;HaplotypeScore=208.7897;InbreedingCoeff=0.4368;MQ=33.97;MQ0=83;MQRankSum=-5.298;QD=5.35;ReadPosRankSum=-4.434;VQSLOD=1.8787;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:14,2:28:2.35:10,2,0	1/1:9,1:10:3.90:49,4,0	0/0:18,0:4:3.01:0,3,39	0/0:26,0:6:8.95:0,9,108	0/0:22,0:20:11.76:0,12,226	1/1:11,2:12:7.26:84,7,0	0/1:31,4:23:15.21:194,0,15	1/1:41,4:17:1.81:318,2,0	0/0:25,0:24:2.87:0,3,152	1/1:42,7:35:15.57:647,16,0	0/1:9,2:10:0.01:0,0,0	0/0:21,0:16:5.35:0,5,65	0/0:22,0:20:26.15:0,26,348	0/0:19,0:19:20.66:0,21,245	1/1:15,5:20:7.32:51,7,0	0/0:15,0:13:11.85:0,12,156	0/0:30,0:28:57.14:0,57,701	0/1:16,5:21:42.26:341,0,42	0/1:16,1:11:11.85:101,0,12	0/1:10,4:15:2.54:3,0,30	1/1:32,5:19:4.92:97,5,0	0/0:14,0:14:8.21:0,8,186	1/1:22,0:21:2.46:23,2,0	0/0:32,0:29:8.50:0,8,113	1/1:20,2:20:1.94:39,2,0	0/0:32,0:27:37.20:0,37,671	1/1:9,3:10:15.05:203,15,0	0/0:17,0:16:33.10:0,33,419
chr10	37883974	.	GTA	G	143.53	PASS	AB=0.964;AC=14;AF=0.250;AN=56;BaseQRankSum=4.022;DP=663;FS=1.618;HRun=0;HaplotypeScore=207.6720;InbreedingCoeff=0.1282;MQ=32.99;MQ0=79;MQRankSum=-4.549;QD=0.53;ReadPosRankSum=-6.409;VQSLOD=0.9603;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:30,2:30:1:5,1,0	0/0:10,0:10:2.12:0,2,32	0/0:24,0:5:14.84:0,15,188	0/0:31,0:6:17.88:0,18,251	0/0:24,0:21:1.12:0,1,327	0/0:14,0:13:3.90:0,4,51	0/0:34,0:22:27.45:0,27,275	0/1:45,3:22:46.42:46,0,371	0/1:26,0:23:0.65:1,0,267	0/1:42,1:31:37.38:37,0,390	1/1:10,0:8:0.32:1,0,0	0/1:19,2:16:16.99:17,0,97	0/0:21,0:19:24.88:0,25,487	0/0:23,0:21:24.05:0,24,395	1/1:23,0:21:3.05:28,3,0	0/0:14,0:12:12.04:0,12,231	0/0:27,0:26:60.14:0,60,1093	0/1:23,0:20:39.03:39,0,264	0/1:18,1:11:55.71:56,0,134	0/0:17,0:15:7.15:0,7,110	0/0:36,0:19:5.38:0,5,63	0/0:14,0:13:18.02:0,18,308	1/1:21,2:22:5.50:47,6,0	0/0:30,1:28:8.69:0,9,121	0/0:22,0:18:1.08:0,1,14	0/0:27,0:22:36:0,36,922	0/0:11,0:9:14.87:0,15,124	0/0:13,0:13:33.11:0,33,597
chr10	37884011	.	CGTGTCTGTGCGCACGCGCGTGCGCGTGTGT	C	592.64	PASS	AB=1.000;AC=16;AF=0.286;AN=56;BaseQRankSum=-1.331;DP=506;FS=4.665;HRun=0;HaplotypeScore=340.9485;InbreedingCoeff=0.1869;MQ=49.65;MQ0=8;MQRankSum=-6.294;QD=2.72;ReadPosRankSum=-9.105;VQSLOD=-0.2894;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:23:5.49:5,0,106	0/0:8,0:8:11.86:0,12,655	0/0:34,0:11:20.78:0,21,362	0/0:34,0:9:23.97:0,24,514	0/1:18,0:18:8.33:8,0,1203	0/0:20,0:19:13.13:0,13,901	0/0:34,0:31:18.23:0,18,2682	0/1:28,0:24:46.03:46,0,909	0/0:18,0:18:39:0,39,1870	0/0:26,0:23:51.83:0,52,2233	1/1:6,0:6:0.89:3,1,0	1/1:1,8:8:6.02:266,6,0	0/0:20,0:20:24.81:0,25,1892	0/0:13,0:13:23.88:0,24,1695	0/0:15,0:14:6.90:0,7,669	0/0:8,0:8:14.61:0,15,493	0/1:28,0:28:10.45:10,0,2614	0/1:18,0:18:2.21:2,0,1255	0/0:15,0:12:27.09:0,27,923	0/0:9,0:7:1.62:0,2,271	0/1:25,0:25:7.65:8,0,810	0/0:11,0:11:1.50:0,1,1067	1/1:1,17:18:12.34:241,12,0	1/1:14,1:15:6.14:58,6,0	0/1:11,0:10:2.01:2,0,509	0/1:17,0:17:90.73:91,0,2311	0/0:12,0:10:5.48:0,5,837	0/0:10,0:10:21.54:0,22,998
chr10	37884019	.	TGCGCACGCGC	T	61.45	PASS	AB=0.975;AC=11;AF=0.196;AN=56;BaseQRankSum=8.919;DP=466;FS=16.917;HRun=0;HaplotypeScore=229.0107;InbreedingCoeff=0.2998;MQ=52.72;MQ0=6;MQRankSum=-5.810;QD=0.51;ReadPosRankSum=-7.603;VQSLOD=-0.5500;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:16:1.01:0,1,89	0/0:9,0:9:16.58:0,17,656	0/0:24,0:9:14.68:0,15,208	0/0:24,0:8:19.59:0,20,290	0/0:16,0:16:16.19:0,16,780	0/0:19,0:19:16.38:0,16,738	0/1:34,0:33:19.20:19,0,1914	0/0:19,0:17:43.90:0,44,808	0/0:18,0:18:41.69:0,42,1352	0/0:26,0:24:66.29:0,66,1853	1/1:6,0:6:0.47:2,0,0	1/1:8,0:8:3.01:102,3,0	0/0:21,0:21:44.87:0,45,1398	0/0:11,0:11:27.09:0,27,1131	0/0:15,0:15:10.72:0,11,552	0/0:7,0:7:14.47:0,14,386	0/0:26,0:26:56.31:0,56,1808	0/1:19,1:20:38.87:39,0,1156	0/0:15,0:14:36.12:0,36,1175	0/0:8,0:8:3.98:0,4,172	0/0:26,0:26:10.08:0,10,538	0/0:12,0:12:26.20:0,26,826	1/1:17,0:18:0.03:0,0,0	1/1:7,5:14:1.41:4,1,0	0/0:11,0:10:2.95:0,3,380	0/1:18,0:18:1.17:1,0,1712	0/0:9,0:9:24.08:0,24,645	0/0:11,0:11:27.05:0,27,808
chr10	37884035	.	CGTGT	C	5207.86	PASS	AB=0.667;AC=39;AF=0.696;AN=56;BaseQRankSum=-3.700;DP=505;FS=14.996;HRun=0;HaplotypeScore=162.6986;InbreedingCoeff=0.4910;MQ=46.27;MQ0=10;MQRankSum=0.564;QD=14.08;ReadPosRankSum=4.996;VQSLOD=3.5542;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:22:4.16:0,4,68	1/1:4,4:8:9.03:145,9,0	0/0:30,0:11:8.33:0,8,230	0/0:27,0:7:9.01:0,9,161	1/1:6,13:19:2.55:50,3,0	1/1:4,15:19:17.80:298,18,0	0/1:16,19:34:15.98:180,0,16	1/1:12,5:14:6.02:99,6,0	1/1:8,15:24:22.64:487,23,0	1/1:12,9:20:33.11:524,33,0	0/1:3,2:5:0.11:0,0,0	0/0:9,0:8:2.90:0,3,16	1/1:7,18:25:29.21:481,29,0	1/1:6,8:14:0.96:138,1,0	1/1:9,10:19:15.05:245,15,0	0/1:4,5:9:20.41:44,0,20	1/1:8,18:26:38.87:644,39,0	1/1:12,9:21:5.73:188,6,0	1/1:5,10:16:26.44:372,26,0	0/0:4,2:6:0:0,0,0	1/1:19,13:29:2.63:49,3,0	1/1:4,5:9:14.74:243,15,0	0/0:18,0:18:11.43:0,11,60	0/0:21,0:21:2.87:0,3,15	1/1:6,5:10:4.89:54,5,0	1/1:7,13:20:26.63:526,27,0	1/1:4,5:9:15.05:248,15,0	1/1:3,6:9:14.78:193,15,0
chr10	37884428	.	TG	T	574.62	PASS	AB=0.833;AC=5;AF=0.089;AN=56;BaseQRankSum=7.651;DP=710;FS=7.917;HRun=4;HaplotypeScore=163.7691;InbreedingCoeff=-0.0939;MQ=54.07;MQ0=24;MQRankSum=-7.050;QD=3.88;ReadPosRankSum=1.669;VQSLOD=-0.3412;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:43:99:0,105,1375	0/0:8,0:8:24.02:0,24,295	0/0:38,0:21:51.14:0,51,651	0/0:44,1:26:40.76:0,41,776	0/1:21,2:23:5.71:6,0,755	0/0:15,0:15:42.14:0,42,588	0/0:14,0:14:38.34:0,38,509	0/0:33,0:33:87.27:0,87,1199	0/0:21,1:22:27.41:0,27,804	0/0:27,0:27:75.24:0,75,1018	0/0:13,0:13:35.15:0,35,468	0/0:19,0:19:51.07:0,51,647	0/0:29,0:28:67.47:0,67,922	0/0:21,0:21:56.98:0,57,768	0/0:19,0:19:54.17:0,54,738	0/0:19,0:19:48.16:0,48,669	0/1:34,5:38:77.02:77,0,1096	0/0:23,1:24:33.19:0,33,862	0/0:22,0:20:48.16:0,48,672	0/0:23,0:23:50.75:0,51,668	0/0:53,0:53:99:0,127,1759	0/1:22,4:26:81.99:82,0,611	0/1:22,14:36:99:338,0,701	0/0:34,0:33:81.72:0,82,1106	0/0:14,1:15:26.92:0,27,328	0/1:17,7:22:99:186,0,563	0/0:18,0:18:54.18:0,54,755	0/0:7,0:7:21.07:0,21,294
chr10	37884451	.	G	GT	16839.36	PASS	AB=0.627;AC=44;AF=0.786;AN=56;BaseQRankSum=-10.079;DP=702;FS=1.530;HRun=2;HaplotypeScore=140.1949;InbreedingCoeff=0.1475;MQ=53.46;MQ0=27;MQRankSum=7.130;QD=27.74;ReadPosRankSum=3.566;VQSLOD=4.6281;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:9,0:49:99:415,0,127	1/1:1,7:8:21.07:301,21,0	0/0:42,0:22:52.63:0,53,513	0/0:50,0:29:61.25:0,61,617	1/1:4,19:23:17.35:533,17,0	1/1:3,12:15:42.03:549,42,0	1/1:7,12:19:14.26:573,14,0	1/1:3,34:36:99:1417,102,0	1/1:2,28:30:10.39:1047,10,0	1/1:7,22:29:47.24:1055,47,0	1/1:8,9:17:20.87:371,21,0	1/1:2,13:15:42.07:568,42,0	1/1:3,25:28:58.37:858,58,0	1/1:3,17:21:8.17:564,8,0	1/1:3,13:16:45.14:616,45,0	1/1:0,17:17:48.16:690,48,0	0/1:8,31:38:99:1002,0,126	0/1:6,13:19:20:607,0,20	0/1:11,13:22:10.23:652,0,10	1/1:3,16:19:44.95:567,45,0	1/1:15,29:46:83.56:1390,84,0	0/1:6,17:23:21.60:589,0,22	0/1:17,13:30:99:418,0,269	1/1:2,26:27:39.54:988,40,0	1/1:2,12:14:24.08:344,24,0	0/1:10,0:14:88.46:88,0,217	1/1:7,13:20:48.04:608,48,0	0/1:2,0:4:9:31,0,9
chr10	37884464	.	CCTGAGGGT	C	919.02	PASS	AB=0.862;AC=6;AF=0.107;AN=56;BaseQRankSum=8.082;DP=612;FS=6.016;HRun=0;HaplotypeScore=257.3577;InbreedingCoeff=-0.1310;MQ=59.87;MQ0=16;MQRankSum=-6.197;QD=6.17;ReadPosRankSum=2.812;VQSLOD=1.9448;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:43,0:46:60.70:61,0,3976	0/0:8,0:8:24.08:0,24,1019	0/0:39,0:27:78.24:0,78,2187	0/0:35,0:20:60.19:0,60,1677	0/0:14,0:14:39.13:0,39,1780	0/0:14,0:14:42.06:0,42,1551	0/0:21,0:21:63.22:0,63,2493	0/0:39,0:38:99:0,108,3437	0/1:29,0:30:30.02:30,0,3432	0/0:26,0:26:73.49:0,73,2778	0/0:14,0:14:27.09:0,27,935	0/0:13,0:13:35.99:0,36,1130	0/0:20,0:20:57.20:0,57,2411	0/0:19,0:19:38.64:0,39,1824	0/0:14,0:14:42.14:0,42,1660	0/0:20,0:20:57.20:0,57,2530	0/1:36,0:35:99:169,0,2942	0/0:20,0:20:2.39:0,2,1796	0/0:27,0:26:78.27:0,78,2457	0/0:14,0:14:39.13:0,39,1419	0/0:34,0:34:96:0,96,3424	0/0:20,0:21:8.97:0,9,2443	0/1:12,11:23:99:488,0,963	0/0:23,0:23:61.90:0,62,2324	0/0:11,0:11:27.09:0,27,913	0/1:11,0:11:99:246,0,334	0/0:17,0:17:51.11:0,51,1864	0/1:1,0:2:49.74:50,0,77
chr10	37884465	.	CTGAGGGTT	C	981.23	PASS	AB=0.932;AC=7;AF=0.125;AN=56;BaseQRankSum=8.753;DP=604;FS=6.005;HRun=0;HaplotypeScore=254.7943;InbreedingCoeff=-0.1469;MQ=60.21;MQ0=14;MQRankSum=-5.775;QD=5.91;ReadPosRankSum=2.921;VQSLOD=1.9907;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:45,0:45:72.22:72,0,3993	0/0:8,0:8:24.08:0,24,1058	0/0:38,0:27:78.17:0,78,2136	0/0:35,0:21:63.20:0,63,1878	0/0:14,0:14:39.13:0,39,1775	0/0:14,0:14:36.12:0,36,1544	0/0:22,0:22:66.18:0,66,2698	0/0:40,0:39:99:0,114,3694	0/1:29,1:30:44.59:45,0,3451	0/0:26,0:26:75.23:0,75,2856	0/0:13,0:13:30.06:0,30,1023	0/0:12,0:12:36.12:0,36,1247	0/0:21,0:21:60.19:0,60,2496	0/0:19,0:19:36.21:0,36,1843	0/0:14,0:14:42.14:0,42,1701	0/0:20,0:20:57.20:0,57,2578	0/1:31,4:35:99:244,0,2916	0/1:19,1:20:14.56:15,0,1832	0/0:27,0:26:78.27:0,78,2501	0/0:14,0:14:39.13:0,39,1574	0/0:32,0:32:90.06:0,90,3423	0/0:20,0:20:6.03:0,6,2428	0/1:22,0:22:99:354,0,1003	0/0:22,0:22:60.44:0,60,2330	0/0:10,0:10:27.09:0,27,1035	0/1:7,5:11:99:329,0,322	0/0:17,0:17:51.17:0,51,1923	0/1:2,0:2:52.72:53,0,78
chr10	37884467	.	GA	G	183.87	PASS	AB=0.938;AC=6;AF=0.107;AN=56;BaseQRankSum=10.022;DP=596;FS=2.774;HRun=1;HaplotypeScore=183.4432;InbreedingCoeff=0.5754;MQ=61.70;MQ0=5;MQRankSum=-7.652;QD=3.28;ReadPosRankSum=1.313;VQSLOD=0.2314;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:54.39:0,54,1376	0/0:8,0:8:24.05:0,24,356	0/0:33,3:28:74.73:0,75,1021	0/0:31,0:22:65.16:0,65,769	0/0:14,0:14:39.13:0,39,622	0/0:12,0:12:36.12:0,36,564	0/0:22,0:22:49.45:0,49,895	0/0:39,0:38:99:0,111,1650	0/0:30,0:30:68.20:0,68,1225	0/0:25,0:25:58.85:0,59,992	0/0:14,0:14:26.95:0,27,356	0/0:12,0:12:36.12:0,36,562	0/0:21,0:21:57.16:0,57,873	0/0:20,0:20:30.56:0,31,636	0/0:15,0:15:45.12:0,45,652	0/0:20,0:20:57.18:0,57,906	0/0:35,0:35:18.65:0,19,998	0/1:18,3:21:32.68:33,0,565	0/0:29,0:29:72.39:0,72,1263	0/0:14,0:14:39.08:0,39,531	0/0:32,1:33:41.08:0,41,1136	0/0:20,0:20:52.98:0,53,853	0/1:22,0:22:10.61:11,0,351	0/0:20,0:20:36:0,36,768	0/0:11,0:11:23.99:0,24,330	1/1:7,4:10:26.61:218,27,0	0/0:17,0:17:48.59:0,49,701	1/1:1,1:2:5.23:49,5,0
chr10	37884486	.	T	TG	7706.07	PASS	AB=0.627;AC=25;AF=0.446;AN=56;BaseQRankSum=-6.254;DP=606;FS=3.829;HRun=4;HaplotypeScore=167.8797;InbreedingCoeff=0.9059;MQ=70.71;MQ0=2;MQRankSum=-4.372;QD=29.75;ReadPosRankSum=-1.405;VQSLOD=2.9403;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,110,1145	1/1:4,9:13:33:400,33,0	0/0:39,0:33:77.73:0,78,828	0/0:30,0:25:11.18:0,11,541	0/0:20,0:20:57.14:0,57,628	1/1:2,10:12:33.05:403,33,0	1/1:2,21:23:43.22:745,43,0	1/1:4,24:28:75.09:943,75,0	0/0:31,0:31:88.72:0,89,944	1/1:3,23:26:69.23:938,69,0	1/1:5,7:12:23.98:285,24,0	0/0:10,0:10:30.02:0,30,324	0/0:25,0:25:63.10:0,63,685	0/0:22,0:22:47.17:0,47,489	1/1:4,13:17:45.13:590,45,0	0/0:18,0:18:48.05:0,48,544	0/0:34,0:34:74.51:0,75,766	1/1:12,9:21:33.14:516,33,0	0/1:13,19:30:91.60:709,0,92	1/1:3,12:15:32.81:360,33,0	1/1:8,19:27:36.78:647,37,0	0/0:19,0:19:50.63:0,51,553	0/0:19,0:19:41.38:0,41,328	0/0:16,0:16:33.90:0,34,335	1/1:2,12:14:30.10:405,30,0	0/0:15,0:15:31.48:0,31,133	1/1:2,17:19:57.18:764,57,0	0/0:4,0:4:5.36:0,5,21
chr10	37884490	.	GT	G	353.69	PASS	AB=0.836;AC=6;AF=0.107;AN=56;BaseQRankSum=6.118;DP=612;FS=6.517;HRun=3;HaplotypeScore=191.4922;InbreedingCoeff=0.5702;MQ=72.73;MQ0=1;MQRankSum=-4.661;QD=4.42;ReadPosRankSum=-0.455;VQSLOD=-0.1827;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:43,4:46:30.62:31,0,1310	0/0:13,0:13:38.06:0,38,282	0/0:40,1:36:72.08:0,72,1120	0/0:27,0:25:53.69:0,54,753	0/0:22,0:22:66.18:0,66,882	0/0:12,0:12:30.62:0,31,223	0/0:25,1:26:70.84:0,71,500	0/0:30,0:30:78.32:0,78,547	0/0:30,0:31:53.57:0,54,1128	0/0:27,0:27:68.59:0,69,477	0/0:11,0:11:23.60:0,24,151	0/0:10,0:10:29.77:0,30,398	0/0:23,0:23:63.18:0,63,880	0/0:22,0:22:40.24:0,40,598	0/0:17,0:17:44.19:0,44,342	0/0:17,0:17:48.16:0,48,690	0/0:35,0:35:40.28:0,40,974	0/0:21,0:21:32.62:0,33,357	0/0:32,0:30:73.78:0,74,595	0/0:13,0:13:32.58:0,33,214	0/0:33,0:33:68.07:0,68,491	0/0:19,0:19:43.97:0,44,694	0/1:10,5:15:18.97:19,0,170	0/0:14,1:15:12.16:0,12,333	0/0:14,0:14:36.83:0,37,253	1/1:7,8:15:35.42:359,35,0	0/0:21,0:21:61.71:0,62,405	1/1:0,3:3:6.02:74,6,0
chr10	37884506	.	TG	T	98.76	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=7.939;DP=578;FS=0.736;HRun=5;HaplotypeScore=177.7393;InbreedingCoeff=0.9184;MQ=80.57;MQ0=2;MQRankSum=-6.703;QD=3.95;ReadPosRankSum=1.024;VQSLOD=-0.5210;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:45:90.92:0,91,1302	0/0:13,0:13:38.87:0,39,480	0/0:41,0:37:86.69:0,87,1180	0/0:25,0:25:60.01:0,60,768	0/0:23,0:23:69.20:0,69,905	0/0:13,0:13:39.09:0,39,512	0/0:22,0:22:57.10:0,57,755	0/0:25,0:25:60.16:0,60,786	0/0:30,0:30:73.30:0,73,1055	0/0:29,0:29:72.21:0,72,982	0/0:13,0:13:24.08:0,24,328	1/1:6,2:7:19:98,19,0	0/0:20,0:20:48.16:0,48,655	0/0:21,0:21:46.54:0,47,669	0/0:20,0:20:51.13:0,51,675	0/0:16,0:16:42.14:0,42,574	0/0:31,0:31:63.63:0,64,952	0/0:22,0:22:17.20:0,17,574	0/0:24,0:23:41.42:0,41,655	0/0:13,0:13:32.94:0,33,394	0/0:38,1:39:85.02:0,85,1107	0/0:20,0:20:37.28:0,37,628	1/1:9,0:8:5.62:29,6,0	1/1:6,2:8:11.78:100,12,0	0/0:12,0:12:32.90:0,33,381	0/0:11,0:11:27.09:0,27,368	0/0:19,0:20:43.27:0,43,649	0/0:4,0:4:9.03:0,9,123
chr10	37884510	.	GGT	G	245.14	PASS	AB=0.940;AC=6;AF=0.107;AN=56;BaseQRankSum=7.626;DP=575;FS=2.743;HRun=0;HaplotypeScore=178.5973;InbreedingCoeff=0.5734;MQ=82.24;MQ0=3;MQRankSum=-5.067;QD=5.98;ReadPosRankSum=-1.157;VQSLOD=3.4088;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:43,2:44:60.72:0,61,1959	0/0:13,0:13:39.13:0,39,736	0/0:46,0:42:99:0,105,1867	0/0:25,0:24:46.88:0,47,1089	0/0:23,0:23:69.21:0,69,1302	0/0:13,0:13:39.13:0,39,785	0/0:23,0:23:63.15:0,63,1174	0/0:23,0:23:66.20:0,66,1221	0/0:28,1:29:36.65:0,37,1539	0/0:30,0:30:59.47:0,59,1503	0/0:14,0:14:27.08:0,27,511	1/1:3,6:8:13.37:281,13,0	0/0:19,0:19:51.06:0,51,992	0/0:20,0:21:35.71:0,36,989	0/0:21,0:21:57.13:0,57,1085	0/0:15,0:15:42.14:0,42,852	0/0:27,2:29:15.66:0,16,1356	0/1:19,3:22:9.74:10,0,874	0/0:26,0:25:66.09:0,66,1166	0/0:14,0:14:38.80:0,39,620	0/0:43,0:43:97.93:0,98,1739	0/0:17,1:18:37.56:0,38,964	1/1:2,2:3:5.95:65,6,0	0/1:6,0:6:8.25:8,0,24	0/0:12,0:12:33.03:0,33,591	0/0:9,0:9:27.09:0,27,539	0/0:19,0:19:16.25:0,16,951	0/0:4,0:4:9.03:0,9,182
chr10	37884511	.	GT	G	57.65	PASS	AB=0.895;AC=6;AF=0.107;AN=56;BaseQRankSum=7.769;DP=572;FS=2.669;HRun=3;HaplotypeScore=169.1147;InbreedingCoeff=0.6294;MQ=82.41;MQ0=3;MQRankSum=-6.791;QD=1.44;ReadPosRankSum=1.021;VQSLOD=-0.1193;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:46:91.50:0,92,1380	0/0:13,0:13:33.11:0,33,471	0/0:47,0:42:99:0,109,1356	0/0:28,0:26:64.80:0,65,794	0/0:22,0:22:63.17:0,63,877	0/0:13,0:13:39.13:0,39,552	0/0:23,0:23:60.13:0,60,815	0/0:21,0:21:63.18:0,63,838	0/0:29,0:29:67.50:0,67,1087	0/0:29,0:29:59.46:0,59,1063	0/0:14,0:14:27.08:0,27,368	1/1:9,0:8:15.64:91,16,0	0/0:19,0:19:51.07:0,51,705	0/0:21,0:21:41.77:0,42,695	0/0:20,0:20:57.09:0,57,762	0/0:15,0:15:42.14:0,42,601	0/0:28,0:28:51.06:0,51,959	0/1:21,1:22:1.47:1,0,604	0/0:25,1:25:34.74:0,35,778	0/0:14,0:14:32.65:0,33,370	0/0:40,1:41:84.57:0,85,1200	0/0:18,0:18:45.15:0,45,643	1/1:4,0:3:2.83:14,3,0	0/1:4,1:5:5.47:65,0,5	0/0:12,0:12:27.09:0,27,380	0/0:9,0:9:27.09:0,27,385	0/0:19,0:19:37.44:0,37,642	0/0:4,0:4:9.03:0,9,129
chr10	37884563	.	CCTGGGGTT	C	2775.29	PASS	AB=0.897;AC=23;AF=0.411;AN=56;BaseQRankSum=5.404;DP=552;FS=0.880;HRun=0;HaplotypeScore=264.0529;InbreedingCoeff=-0.7021;MQ=43.88;MQ0=37;MQRankSum=-3.673;QD=7.27;ReadPosRankSum=-3.941;VQSLOD=1.9254;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:42:38.48:0,38,3717	0/1:9,0:9:90.98:91,0,138	0/0:43,0:8:23.63:0,24,688	0/0:44,0:14:9.01:0,9,969	0/0:18,2:20:13.18:0,13,1280	0/1:12,0:12:28.86:29,0,350	0/1:11,0:10:46.92:47,0,284	0/1:26,0:24:35.49:35,0,856	0/1:17,5:21:99:194,0,1666	0/1:18,0:18:15.51:16,0,649	0/1:13,0:11:46.32:46,0,313	0/1:4,6:10:99:311,0,238	0/1:16,14:30:99:600,0,1495	0/1:18,4:21:99:131,0,1124	0/1:19,0:19:56.06:56,0,663	0/1:7,9:16:99:444,0,524	0/1:18,2:20:51.09:51,0,1692	0/1:18,0:18:47.41:47,0,465	0/0:16,0:12:27.09:0,27,575	0/1:15,0:15:47.12:47,0,478	0/1:35,0:33:89.06:89,0,838	0/1:14,7:19:99:121,0,987	0/1:2,0:2:18.98:19,0,81	0/1:7,4:11:99:171,0,302	0/1:11,0:11:51.01:51,0,291	0/1:17,4:20:99:207,0,1358	0/1:16,0:14:68.10:68,0,411	0/1:3,1:3:18.98:61,0,19
chr10	37884565	.	TG	T	3679.26	PASS	AB=0.794;AC=24;AF=0.429;AN=56;BaseQRankSum=-0.718;DP=549;FS=5.644;HRun=4;HaplotypeScore=212.1413;InbreedingCoeff=0.2797;MQ=46.60;MQ0=34;MQRankSum=-0.960;QD=13.88;ReadPosRankSum=-0.432;VQSLOD=1.8209;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:42:99:0,111,1469	1/1:2,7:9:17.76:161,18,0	0/0:46,0:12:32.73:0,33,374	0/0:42,1:17:29.99:0,30,414	0/0:19,0:20:35.47:0,35,412	1/1:5,8:13:23.32:251,23,0	1/1:5,7:11:15.04:177,15,0	0/1:16,8:22:99:182,0,300	0/0:21,0:20:20.98:0,21,603	0/1:9,10:19:34.07:322,0,34	1/1:2,11:11:25.27:272,25,0	0/1:10,0:10:51.85:52,0,144	0/0:29,0:29:73.69:0,74,765	0/0:22,0:21:44.75:0,45,459	1/1:6,13:19:40.08:472,40,0	0/0:16,0:16:32.19:0,32,294	0/0:20,0:20:24.72:0,25,595	0/1:3,14:17:24.89:340,0,25	0/1:8,8:12:75.61:186,0,76	0/1:8,7:15:47.72:196,0,48	0/1:15,19:32:87.66:487,0,88	0/1:21,0:19:42.55:43,0,299	0/0:2,0:2:3.01:0,3,42	0/1:11,0:11:10.22:10,0,181	1/1:1,10:11:23.99:254,24,0	0/0:18,1:18:8.83:0,9,472	1/1:10,7:15:8.19:275,8,0	0/1:4,0:3:0:0,0,0
chr10	37884585	.	GA	G	2759.07	PASS	AB=0.712;AC=23;AF=0.426;AN=54;BaseQRankSum=11.977;DP=431;FS=9.497;HRun=1;HaplotypeScore=208.5628;InbreedingCoeff=-0.5981;MQ=57.43;MQ0=7;MQRankSum=-8.431;QD=9.14;ReadPosRankSum=-1.739;VQSLOD=-0.1074;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,1:29:67.92:0,68,443	0/1:2,3:5:25.45:50,0,25	0/0:39,0:28:73.85:0,74,1059	0/0:47,1:32:86.63:0,87,1274	0/1:10,5:15:35.84:36,0,288	0/1:6,4:10:56.21:94,0,56	0/1:6,4:10:39.31:133,0,39	./.	0/1:10,12:22:99:261,0,326	0/1:8,6:14:81.07:130,0,81	0/1:9,3:10:16.66:17,0,41	0/1:3,7:10:39.68:193,0,40	0/1:9,21:29:99:527,0,340	0/1:7,10:17:99:250,0,277	0/1:8,5:13:46.21:157,0,46	0/1:4,9:13:99:305,0,104	0/1:14,3:17:99:126,0,371	0/1:11,0:11:7.07:7,0,57	0/0:7,0:7:17.53:0,18,109	0/1:5,8:13:29.38:79,0,29	0/1:22,2:24:41.45:92,0,41	0/1:8,8:15:50.25:50,0,294	0/0:2,0:2:2.94:0,3,18	0/1:6,3:9:31.10:71,0,31	0/1:4,4:8:5.82:56,0,6	0/1:14,6:20:99:133,0,586	0/1:4,5:8:21.32:89,0,21	1/1:2,2:4:5.97:57,6,0
chr10	37884590	.	TATAGGTGTGTC	T	9449.15	PASS	AB=0.707;AC=39;AF=0.722;AN=54;BaseQRankSum=9.772;DP=399;FS=1.911;HRun=0;HaplotypeScore=246.5685;InbreedingCoeff=0.1037;MQ=58.84;MQ0=0;MQRankSum=-9.869;QD=30.29;ReadPosRankSum=0.321;VQSLOD=4.0736;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:28:1.59:2,0,514	1/1:1,3:4:11.78:245,12,0	0/0:36,0:30:79.39:0,79,2155	0/0:49,0:37:90.95:0,91,2998	0/1:9,5:14:56.41:56,0,195	1/1:5,4:9:22.33:414,22,0	1/1:4,4:8:23.43:470,23,0	./.	0/1:9,12:21:99:915,0,133	1/1:6,6:12:21.59:576,22,0	1/1:8,3:10:10.91:167,11,0	1/1:3,7:10:28.93:537,29,0	0/1:9,21:29:99:1326,0,223	0/1:8,9:17:99:654,0,203	1/1:4,5:9:21.29:492,21,0	0/1:4,9:13:96.45:606,0,96	0/1:8,5:13:99:213,0,231	1/1:7,0:7:8.96:126,9,0	1/1:6,0:6:8.95:110,9,0	1/1:5,8:13:29.60:476,30,0	1/1:20,2:22:20.08:251,20,0	0/1:8,8:15:99:271,0,217	0/0:2,0:2:1.11:0,1,12	1/1:6,3:9:2.25:234,2,0	1/1:4,4:8:12.51:324,13,0	0/1:14,6:20:99:451,0,1109	1/1:4,4:7:12.55:368,13,0	1/1:2,2:4:6.02:165,6,0
chr10	37884601	.	C	CATGGGTT	16481.83	PASS	AB=0.992;AC=30;AF=0.536;AN=56;BaseQRankSum=-0.155;DP=516;FS=2.188;HRun=0;HaplotypeScore=247.5886;InbreedingCoeff=-0.4313;MQ=54.56;MQ0=0;MQRankSum=-6.474;QD=40.50;ReadPosRankSum=-3.319;VQSLOD=4.0079;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:2.57:0,3,1441	0/1:5,0:5:57.24:443,0,57	0/0:33,0:31:43.78:0,44,1400	0/0:44,0:36:96.10:0,96,2026	0/1:26,0:26:99:465,0,237	0/1:12,0:12:68.25:652,0,68	0/1:14,0:14:99:897,0,108	1/1:5,0:4:9.02:197,9,0	0/1:25,0:25:99:1185,0,381	0/1:18,0:18:99:1112,0,117	1/1:10,0:10:12:324,12,0	0/1:14,0:14:99:544,0,144	0/1:33,0:32:99:1680,0,509	0/1:21,0:21:99:919,0,470	1/1:11,0:11:27.07:868,27,0	0/1:17,0:17:99:844,0,175	0/1:22,0:22:99:636,0,594	0/1:11,0:11:2.14:384,0,2	0/1:9,2:11:47.62:572,0,48	0/1:15,0:15:36.46:713,0,36	1/1:7,23:39:24:647,24,0	0/1:21,0:20:99:509,0,205	0/1:6,0:6:57.20:95,0,57	0/1:13,0:13:99:319,0,129	1/1:19,0:19:42.06:995,42,0	0/1:23,0:23:99:652,0,842	0/1:12,0:12:99:644,0,109	0/1:4,0:4:3.09:186,0,3
chr10	37884633	.	TG	T	753.70	PASS	AB=0.571;AC=3;AF=0.054;AN=56;BaseQRankSum=0.981;DP=657;FS=0.000;HRun=3;HaplotypeScore=236.6988;InbreedingCoeff=0.5977;MQ=64.86;MQ0=1;MQRankSum=-2.414;QD=24.31;ReadPosRankSum=0.076;VQSLOD=2.2174;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:54.10:0,54,716	0/0:8,0:8:24.08:0,24,345	0/0:26,0:25:64.78:0,65,949	0/0:32,0:28:68.96:0,69,922	0/0:28,0:28:72.07:0,72,1034	0/0:17,0:17:51.17:0,51,734	0/0:24,0:24:72.22:0,72,992	0/0:27,0:26:78.26:0,78,1123	0/0:35,0:35:83.50:0,83,1292	0/0:28,0:28:75.25:0,75,1072	0/0:10,0:10:28.65:0,29,389	0/0:22,0:22:45.92:0,46,573	0/0:34,0:33:78.39:0,78,1236	0/0:27,0:27:72.20:0,72,1004	0/0:19,0:19:57.15:0,57,796	0/0:24,0:24:41.18:0,41,794	0/0:30,0:29:67.23:0,67,1049	0/0:17,0:17:51.17:0,51,730	0/0:23,0:23:63.20:0,63,878	0/0:24,0:24:66.12:0,66,868	0/0:64,0:64:83.74:0,84,1161	0/0:17,0:17:45.15:0,45,625	0/0:14,0:14:39.13:0,39,551	0/0:12,0:12:24.08:0,24,334	0/0:24,0:24:72.23:0,72,1018	1/1:6,21:27:9.50:752,9,0	0/0:15,0:15:45.14:0,45,622	0/1:1,3:4:31.08:99,0,31
chr10	37884644	.	T	TG	2123.13	PASS	AB=0.566;AC=6;AF=0.107;AN=56;BaseQRankSum=0.058;DP=664;FS=6.548;HRun=3;HaplotypeScore=217.8368;InbreedingCoeff=0.5385;MQ=72.69;MQ0=1;MQRankSum=-0.424;QD=29.08;ReadPosRankSum=-0.175;VQSLOD=1.9199;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,20:28:77.92:957,78,0	0/0:11,0:11:30.04:0,30,331	0/0:29,0:29:77.07:0,77,838	0/0:24,0:21:39.08:0,39,448	0/0:28,0:28:77.83:0,78,816	0/0:18,0:18:51.16:0,51,611	0/0:28,0:28:75.02:0,75,831	0/0:31,0:31:93.28:0,93,1106	0/0:32,0:32:90.27:0,90,1076	0/0:27,0:27:75.18:0,75,872	0/0:11,0:11:30.05:0,30,344	0/1:3,14:17:59.63:481,0,60	0/0:31,0:30:87.22:0,87,1026	0/0:28,0:28:78.24:0,78,933	0/0:20,0:20:60.14:0,60,703	0/0:21,0:21:60.02:0,60,683	0/0:31,0:30:73.16:0,73,865	0/0:21,0:21:63.15:0,63,738	0/0:20,0:20:54.15:0,54,629	0/0:23,0:23:65.68:0,66,650	0/0:68,1:69:98.66:0,99,1207	0/0:17,0:17:42:0,42,455	1/1:2,12:14:3.21:468,3,0	0/1:4,10:14:22.70:344,0,23	0/0:24,0:24:72.16:0,72,835	0/0:25,0:25:75.11:0,75,856	0/0:17,0:17:48.10:0,48,559	0/0:5,0:5:12.04:0,12,144
chr10	37885749	.	ACACTCTCT	A	1793.36	PASS	AB=1.000;AC=31;AF=0.596;AN=52;BaseQRankSum=-0.485;DP=321;FS=8.388;HRun=0;HaplotypeScore=95.0691;InbreedingCoeff=0.4646;MQ=90.74;MQ0=5;MQRankSum=-1.658;QD=8.11;ReadPosRankSum=-3.431;VQSLOD=-0.2200;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:20.96:0,21,189	./.	0/0:35,0:25:69.84:0,70,877	0/1:55,0:28:4.49:4,0,325	1/1:6,0:5:2.90:25,3,0	1/1:10,0:10:6.46:51,6,0	0/1:11,0:11:4.37:123,0,4	1/1:0,12:12:33.01:353,33,0	0/1:12,0:12:17.57:18,0,364	1/1:2,7:9:17.77:276,18,0	1/1:5,0:5:5.99:50,6,0	0/0:9,0:9:11.94:0,12,92	1/1:6,0:6:5.99:49,6,0	0/1:6,0:5:33.91:60,0,34	1/1:14,0:14:5.95:72,6,0	0/0:6,0:6:11.99:0,12,145	0/1:17,0:16:27.32:27,0,426	1/1:12,0:12:32.92:359,33,0	1/1:4,0:4:12:117,12,0	0/0:2,5:7:3.01:0,3,50	1/1:23,0:22:23.73:239,24,0	0/0:8,0:7:11.98:0,12,97	0/0:7,0:7:15.02:0,15,198	0/0:5,0:5:9.01:0,9,120	./.	1/1:6,0:6:7.08:36,7,0	1/1:11,0:11:8.97:70,9,0	1/1:2,0:2:5.99:48,6,0
chr10	37885760	.	C	CTCTCTG	904.37	PASS	AB=0.886;AC=16;AF=0.320;AN=50;BaseQRankSum=2.331;DP=337;FS=7.632;HRun=0;HaplotypeScore=89.8467;InbreedingCoeff=0.4988;MQ=66.19;MQ0=13;MQRankSum=-3.385;QD=5.26;ReadPosRankSum=-3.210;VQSLOD=0.2099;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:13:5.99:0,6,48	./.	0/0:23,0:13:21.59:0,22,204	0/1:50,0:23:18.80:19,0,113	0/0:7,0:6:5.99:0,6,50	0/0:3,8:11:0.39:0,0,1	0/1:11,0:11:11.16:60,0,11	1/1:18,0:18:20.92:257,21,0	0/0:13,0:13:27.09:0,27,541	1/1:13,0:12:14.64:181,15,0	0/0:5,0:5:0:0,0,0	./.	./.	0/0:5,0:4:6.02:0,6,132	1/1:12,2:14:2.99:24,3,0	0/0:8,0:8:0.43:0,0,169	0/0:20,0:19:22.10:0,22,660	1/1:17,0:13:23.93:298,24,0	1/1:11,0:10:21.88:171,22,0	0/0:8,0:6:3:0,3,25	1/1:21,0:19:5.90:48,6,0	0/0:11,0:9:15.04:0,15,272	0/0:6,0:6:8.99:0,9,75	0/0:5,0:4:5.99:0,6,49	0/1:5,0:5:0:0,0,0	0/0:8,0:7:20.90:0,21,167	0/1:2,8:10:0:0,0,0	0/0:3,0:1:2.99:0,3,24
chr10	37885772	.	CTG	C	382.91	PASS	AB=0.997;AC=19;AF=0.500;AN=38;BaseQRankSum=-0.738;DP=293;FS=18.996;HRun=0;HaplotypeScore=58.9156;InbreedingCoeff=0.1398;MQ=49.97;MQ0=14;MQRankSum=-1.142;QD=2.14;ReadPosRankSum=-1.895;VQSLOD=-0.4525;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:14:8.99:74,9,0	./.	0/1:13,0:5:10.25:46,0,10	0/1:34,0:13:24.32:27,0,24	./.	0/1:10,0:10:0:0,0,0	1/1:9,0:9:5.91:38,6,0	0/1:16,0:16:51.66:52,0,89	0/0:12,0:12:26.16:0,26,218	0/1:13,0:12:11:48,0,11	0/1:6,0:5:0:0,0,0	1/1:0,6:6:3:25,3,0	./.	0/0:5,0:3:5.99:0,6,48	./.	0/0:8,0:8:12.86:0,13,98	0/1:18,0:17:1.63:2,0,196	0/1:15,0:11:47.44:47,0,70	0/0:13,0:12:11.59:0,12,136	./.	./.	0/0:10,0:8:11.97:0,12,96	./.	./.	./.	1/1:7,0:6:17.78:122,18,0	0/1:13,0:11:5.32:7,0,5	1/1:3,0:1:2.99:24,3,0
chr10	37885784	.	C	CTG	317.32	PASS	AB=1.000;AC=12;AF=0.333;AN=36;BaseQRankSum=1.274;DP=236;FS=0.000;HRun=0;HaplotypeScore=53.0542;InbreedingCoeff=0.4252;MQ=31.14;MQ0=20;MQRankSum=5.033;QD=3.69;ReadPosRankSum=1.772;VQSLOD=1.7659;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:12:3:0,3,25	./.	./.	0/0:15,0:2:1.55:0,2,4	./.	0/1:8,0:8:0:0,0,0	0/0:6,0:6:2.97:0,3,20	0/0:18,0:17:43.97:0,44,283	1/1:8,0:8:14.78:130,15,0	0/0:12,0:11:9.34:0,9,107	0/0:4,0:3:0:0,0,0	./.	./.	1/1:5,0:3:5.99:48,6,0	./.	1/1:6,0:6:8.93:76,9,0	0/1:18,0:16:9.34:99,0,9	0/1:16,0:11:13.80:14,0,23	0/0:13,0:12:29.60:0,30,200	./.	0/1:17,0:15:0:0,0,0	1/1:8,0:5:8.98:72,9,0	./.	./.	./.	0/0:7,0:6:17.06:0,17,111	0/0:8,0:6:5.82:0,6,33	0/0:4,0:1:2.99:0,3,24
chr10	37887091	.	A	AC	1655.56	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-8.647;DP=666;FS=12.491;HRun=1;HaplotypeScore=62.0527;InbreedingCoeff=0.9994;MQ=83.02;MQ0=0;MQRankSum=-0.797;QD=39.42;ReadPosRankSum=-0.067;VQSLOD=3.0480;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:96.31:0,96,1246	0/0:13,0:13:39.13:0,39,506	0/0:26,0:26:57.55:0,58,883	0/0:22,0:22:39.61:0,40,634	0/0:21,0:21:54.18:0,54,701	0/0:21,0:21:63.20:0,63,818	0/0:33,0:33:96.31:0,96,1246	0/0:41,0:41:99:0,123,1559	0/0:25,0:25:69.21:0,69,880	0/0:31,0:31:93.27:0,93,1178	0/0:24,0:24:72.22:0,72,921	0/0:21,0:21:63.20:0,63,818	0/0:16,0:16:48.16:0,48,623	0/0:20,0:20:57.18:0,57,737	0/0:26,0:26:78.24:0,78,996	0/0:16,0:16:48.15:0,48,610	0/0:25,0:24:72.23:0,72,935	0/0:24,0:24:69.22:0,69,894	0/0:16,0:16:45.12:0,45,568	0/0:31,0:31:93.30:0,93,1207	0/0:20,0:20:60.20:0,60,779	0/0:25,0:25:75.24:0,75,974	0/0:22,0:22:66.20:0,66,843	0/0:26,0:26:72.23:0,72,935	0/0:20,0:19:54.16:0,54,685	1/1:0,32:32:93.30:1373,93,0	0/0:27,0:27:78.24:0,78,999	1/1:0,10:10:27.09:404,27,0
chr10	37887745	.	GTGAAGCCTAGT	G	2339.34	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=8.206;DP=826;FS=2.579;HRun=0;HaplotypeScore=242.5336;InbreedingCoeff=0.9988;MQ=59.09;MQ0=11;MQRankSum=-8.384;QD=49.77;ReadPosRankSum=-0.275;VQSLOD=3.4282;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:4,43:47:78.27:2434,78,0	0/0:13,0:13:39.12:0,39,2063	0/0:39,0:22:57.18:0,57,2421	0/0:39,0:27:78.21:0,78,3554	0/0:24,0:24:69.24:0,69,3620	0/0:17,0:17:51.17:0,51,2416	0/0:33,0:33:92.71:0,93,4920	0/0:41,0:41:99:0,117,5382	0/0:34,0:34:99:0,99,5202	0/0:33,0:31:93.31:0,93,4956	0/0:13,0:13:39.11:0,39,1746	0/0:35,0:35:99:0,102,5371	0/0:32,0:32:96.31:0,96,5019	0/0:27,0:27:81.22:0,81,3884	0/0:25,0:25:63.20:0,63,3202	0/0:29,0:29:87.27:0,87,4461	0/0:37,0:37:99:0,111,5331	0/0:28,0:27:75.22:0,75,3923	0/0:33,0:30:87.24:0,87,4438	0/0:23,0:23:69.23:0,69,3572	0/0:53,0:53:99:0,151,7611	0/0:31,0:30:81.27:0,81,4246	0/0:15,0:15:45.02:0,45,2194	0/0:38,0:38:99:0,114,5846	0/0:21,0:21:63.17:0,63,3145	0/0:20,0:20:60.18:0,60,2556	0/0:37,0:37:99:0,108,5405	0/0:9,0:9:27.09:0,27,1558
chr10	37889164	.	T	TG	20810.17	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-16.418;DP=774;FS=0.874;HRun=0;HaplotypeScore=77.3799;InbreedingCoeff=0.9977;MQ=89.05;MQ0=0;MQRankSum=-4.057;QD=42.91;ReadPosRankSum=2.134;VQSLOD=5.4660;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,52:53:99:2035,129,0	1/1:0,17:17:44.75:719,45,0	0/0:36,0:36:99:0,104,1375	0/0:22,0:22:54.15:0,54,720	0/0:28,0:28:78.26:0,78,1084	1/1:1,25:26:69.24:1103,69,0	1/1:0,18:18:54.18:863,54,0	1/1:1,35:36:99:1643,105,0	0/0:29,0:29:84.28:0,84,1168	1/1:2,36:38:99:1761,114,0	1/1:0,17:17:45.15:706,45,0	1/1:0,26:26:72.25:1151,72,0	0/0:24,0:24:72.24:0,72,1004	0/0:29,0:29:81.27:0,81,1118	1/1:0,28:27:72.25:1148,72,0	0/0:18,0:18:54.18:0,54,755	0/0:43,0:43:99:0,129,1800	1/1:0,29:29:78.27:1246,78,0	1/1:2,33:35:99:1573,102,0	1/1:0,14:14:42.14:672,42,0	1/1:2,53:55:99:2307,146,0	0/0:34,0:34:93.31:0,93,1293	1/1:0,13:13:33.11:528,33,0	1/1:1,33:34:87.30:1391,87,0	1/1:0,16:16:42.14:672,42,0	0/0:21,0:21:63.21:0,63,880	1/1:0,30:30:81.28:1293,81,0	0/0:5,0:5:15.05:0,15,210
chr10	37889354	.	G	GTGTGTGTC	14396.29	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-1.686;DP=775;FS=6.729;HRun=0;HaplotypeScore=222.2093;InbreedingCoeff=0.6950;MQ=67.22;MQ0=3;MQRankSum=-3.047;QD=23.11;ReadPosRankSum=-0.787;VQSLOD=3.5593;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:39,0:39:18.40:236,18,0	1/1:3,6:9:8.92:368,9,0	0/0:52,0:35:33.26:0,33,533	0/0:61,0:44:35.67:0,36,931	1/1:5,10:15:6.02:238,6,0	1/1:9,15:24:24.08:959,24,0	1/1:23,15:38:12:377,12,0	1/1:48,0:47:72.15:1544,72,0	1/1:9,18:29:27.09:1083,27,0	1/1:13,19:32:71.32:1617,71,0	1/1:3,9:13:6.02:223,6,0	1/1:11,0:26:12.45:830,12,0	1/1:9,9:23:26.83:1102,27,0	1/1:6,19:25:26.77:1103,27,0	1/1:9,16:28:18.06:730,18,0	1/1:8,12:20:12.04:499,12,0	1/1:11,12:23:12.04:475,12,0	1/1:8,11:20:3.01:110,3,0	1/1:10,8:18:29.99:722,30,0	1/1:6,20:28:3.01:37,3,0	1/1:24,15:46:2.87:105,3,0	1/1:5,14:22:3.48:36,3,0	1/1:8,0:24:1.87:86,2,0	1/1:15,0:33:12.04:364,12,0	1/1:4,12:17:11.81:461,12,0	0/0:28,0:28:63.14:0,63,1342	1/1:8,13:21:27.09:1091,27,0	0/0:11,0:11:24.08:0,24,599
chr10	37889513	.	TGC	T	3533.96	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=15.981;DP=613;FS=13.482;HRun=0;HaplotypeScore=109.5724;InbreedingCoeff=0.9991;MQ=82.93;MQ0=0;MQRankSum=-6.005;QD=28.50;ReadPosRankSum=3.711;VQSLOD=4.5828;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,144,2916	0/0:8,0:8:24.07:0,24,451	0/0:19,0:19:57.18:0,57,1058	0/0:24,0:24:62.57:0,63,1144	1/1:2,19:21:49.80:506,50,0	0/0:25,0:25:63.20:0,63,1241	0/0:25,0:25:75.26:0,75,1516	0/0:40,0:40:99:0,117,2302	1/1:5,10:15:41.51:395,42,0	0/0:24,0:24:72.24:0,72,1420	0/0:12,0:12:36.10:0,36,648	0/0:19,0:19:54.19:0,54,1059	1/1:3,13:16:42.96:449,43,0	1/1:0,15:15:45.09:458,45,0	0/0:35,0:35:99:0,99,2006	1/1:2,12:14:40.61:402,41,0	1/1:2,26:28:78.17:865,78,0	0/0:18,0:18:54.19:0,54,1075	0/0:14,0:14:42.12:0,42,815	0/0:17,0:17:48.15:0,48,928	0/0:52,0:52:99:0,153,3006	1/1:0,15:15:45.08:459,45,0	0/0:12,0:12:33.10:0,33,629	0/0:26,0:26:69.24:0,69,1383	0/0:11,0:11:30.10:0,30,609	0/0:26,0:26:78.26:0,78,1541	0/0:24,0:24:72.25:0,72,1435	0/0:8,0:8:24.08:0,24,487
chr10	37889516	.	TC	T	2179.60	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=15.984;DP=604;FS=7.842;HRun=2;HaplotypeScore=100.1788;InbreedingCoeff=0.9981;MQ=82.78;MQ0=0;MQRankSum=-5.729;QD=18.63;ReadPosRankSum=4.798;VQSLOD=3.3854;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,150,2122	0/0:7,0:7:21.07:0,21,314	0/0:19,0:19:54.14:0,54,776	0/0:23,0:23:60.80:0,61,860	1/1:0,19:19:47.39:342,47,0	0/0:23,0:23:63.21:0,63,943	0/0:27,0:27:75.21:0,75,1061	0/0:40,0:40:99:0,120,1693	1/1:0,10:10:29.78:222,30,0	0/0:24,0:24:69.22:0,69,996	0/0:12,0:12:36.12:0,36,536	0/0:18,0:18:54.14:0,54,783	1/1:0,13:15:41.41:308,41,0	1/1:2,15:17:37.77:321,38,0	0/0:35,0:35:99:0,99,1460	1/1:0,12:13:38.33:269,38,0	1/1:2,26:28:77.26:606,77,0	0/0:18,0:18:54.18:0,54,809	0/0:14,0:14:42.13:0,42,611	0/0:16,0:16:45.15:0,45,673	0/0:53,0:53:99:0,156,2287	1/1:0,15:15:44.38:310,44,0	0/0:10,0:10:27.08:0,27,385	0/0:28,0:28:75.25:0,75,1120	0/0:10,0:10:30.09:0,30,431	0/0:26,0:26:75.20:0,75,1079	0/0:24,0:24:72.24:0,72,1068	0/0:8,0:8:21.07:0,21,315
chr10	37889819	.	G	GTC	7231.54	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=1.753;DP=276;FS=13.922;HRun=0;HaplotypeScore=178.4180;InbreedingCoeff=0.6747;MQ=55.91;MQ0=14;MQRankSum=-1.114;QD=34.77;ReadPosRankSum=1.097;VQSLOD=5.1592;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:19:45.59:609,46,0	1/1:3,0:3:9.03:154,9,0	0/0:30,0:7:9.02:0,9,125	0/0:38,0:13:16.92:0,17,209	1/1:6,0:5:10.28:138,10,0	1/1:6,0:6:15.05:254,15,0	1/1:8,0:8:18.06:295,18,0	1/1:9,0:9:16.11:286,16,0	1/1:6,0:6:18.06:272,18,0	1/1:11,0:11:26.53:389,27,0	1/1:3,0:3:2.04:6,2,0	1/1:5,3:8:18.06:303,18,0	1/1:6,0:6:15.05:250,15,0	1/1:12,0:12:30.10:499,30,0	1/1:12,0:11:32.32:494,32,0	1/1:4,1:5:7.60:150,8,0	1/1:5,0:4:12.02:176,12,0	1/1:4,0:4:9.03:162,9,0	1/1:4,0:4:9.02:126,9,0	1/1:11,0:11:18.06:287,18,0	1/1:12,0:12:21.81:291,22,0	1/1:10,0:10:23.29:358,23,0	1/1:3,0:3:3.48:49,3,0	1/1:14,0:14:26.52:389,27,0	1/1:5,0:5:12.04:206,12,0	1/1:11,0:10:27.09:440,27,0	1/1:8,0:8:24.06:338,24,0	1/1:7,0:7:18.06:309,18,0
chr10	37890626	.	CG	C	1033.70	PASS	AB=0.974;AC=14;AF=0.250;AN=56;BaseQRankSum=9.624;DP=467;FS=2.907;HRun=9;HaplotypeScore=74.3124;InbreedingCoeff=0.5749;MQ=73.99;MQ0=0;MQRankSum=0.194;QD=6.76;ReadPosRankSum=2.993;VQSLOD=1.3374;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,25:29:69.02:630,69,0	0/0:11,0:11:29.71:0,30,266	0/0:13,0:12:23.09:0,23,183	0/0:11,0:11:15.86:0,16,116	0/1:13,0:13:6.28:7,0,6	0/0:15,1:16:2.63:0,3,273	0/1:15,2:17:6.68:7,0,436	0/0:23,0:24:32.92:0,33,329	0/1:13,0:13:10.35:60,0,10	0/0:14,0:14:36.04:0,36,381	0/0:18,1:21:26.19:0,26,457	0/0:3,0:10:5.85:0,6,107	1/1:16,0:16:16.01:80,16,0	1/1:13,0:13:1.30:56,1,0	0/0:11,0:11:24.07:0,24,277	1/1:13,0:13:21.14:106,21,0	1/1:26,0:26:32.47:221,32,0	0/0:21,0:21:62.91:0,63,663	0/0:17,0:17:35.98:0,36,371	0/0:18,0:20:38.94:0,39,420	0/0:23,3:27:14.08:0,14,627	0/1:13,0:13:7.37:39,0,7	0/0:6,0:14:8.81:0,9,65	0/0:6,0:11:11.57:0,12,79	0/0:21,0:21:39.09:0,39,431	0/0:18,1:20:26.42:0,26,486	0/0:17,0:17:39.09:0,39,430	0/0:15,0:15:36.08:0,36,402
chr10	37890635	.	GT	G	1835.80	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=12.273;DP=426;FS=3.537;HRun=1;HaplotypeScore=64.6431;InbreedingCoeff=0.8740;MQ=76.32;MQ0=0;MQRankSum=-3.043;QD=15.43;ReadPosRankSum=3.717;VQSLOD=3.7845;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:30:55.11:55,0,73	0/0:15,0:15:44.78:0,45,476	0/0:13,0:13:22.30:0,22,344	0/0:10,0:11:24.66:0,25,178	1/1:0,10:11:8.94:78,9,0	0/0:12,1:13:15.66:0,16,367	0/0:18,0:18:44.42:0,44,623	0/0:23,0:23:54.12:0,54,628	1/1:0,10:11:26.96:288,27,0	0/0:19,0:19:51.14:0,51,633	0/0:18,0:18:45.61:0,46,570	0/0:8,0:8:12.16:0,12,128	1/1:0,12:13:20.98:235,21,0	1/1:0,13:13:24:253,24,0	0/0:8,0:8:24.08:0,24,324	1/1:0,11:11:24.07:296,24,0	1/1:0,22:23:57.11:692,57,0	0/0:22,0:22:63.15:0,63,821	0/0:15,0:15:45.12:0,45,559	0/0:18,0:18:48.02:0,48,548	0/0:27,0:27:71.27:0,71,933	1/1:0,7:7:11.89:135,12,0	0/0:12,0:12:14.75:0,15,110	0/0:6,0:6:11.77:0,12,93	0/0:17,0:17:45.09:0,45,536	0/0:19,0:19:53.59:0,54,677	0/0:13,0:13:39.13:0,39,528	0/0:12,0:12:36.11:0,36,484
chr10	37890637	.	GT	G	1789.76	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=10.787;DP=432;FS=1.081;HRun=1;HaplotypeScore=64.8748;InbreedingCoeff=0.9396;MQ=75.13;MQ0=0;MQRankSum=-2.787;QD=19.89;ReadPosRankSum=1.393;VQSLOD=3.8862;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:87.27:0,87,1224	0/0:16,0:16:48.14:0,48,724	0/0:12,0:12:27.56:0,28,433	0/0:10,0:10:22.46:0,22,334	1/1:10,0:10:11.74:91,12,0	0/0:14,0:14:40:0,40,588	0/0:21,0:21:63.18:0,63,938	0/0:23,0:23:54.18:0,54,856	1/1:8,3:11:26.94:280,27,0	0/0:19,0:19:54.16:0,54,837	0/0:18,0:18:54.18:0,54,848	0/0:10,0:10:1.74:0,2,264	1/1:12,1:13:20.97:230,21,0	1/1:12,2:14:27.01:301,27,0	0/0:7,0:7:21.07:0,21,335	1/1:12,0:12:24.06:284,24,0	1/1:21,2:23:57.09:665,57,0	0/0:21,0:21:63.21:0,63,1006	0/0:16,0:16:45.15:0,45,712	0/0:19,0:19:51.16:0,51,792	0/0:27,0:27:81.28:0,81,1286	1/1:7,0:7:11.89:133,12,0	0/0:11,0:11:15.05:0,15,230	0/0:6,0:6:12.04:0,12,185	0/0:17,0:17:45.15:0,45,712	0/0:19,0:19:57.19:0,57,902	0/0:14,0:14:42.14:0,42,662	0/0:12,0:12:36.12:0,36,560
chr10	37891557	.	AGT	A	1651.40	PASS	AB=0.916;AC=10;AF=0.179;AN=56;BaseQRankSum=3.931;DP=730;FS=5.383;HRun=0;HaplotypeScore=150.7611;InbreedingCoeff=0.4814;MQ=69.71;MQ0=7;MQRankSum=-5.866;QD=11.80;ReadPosRankSum=-0.037;VQSLOD=3.2820;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:43:86.77:0,87,723	0/0:10,0:10:24.08:0,24,379	0/0:41,0:24:17.38:0,17,210	0/0:49,2:29:14.06:0,14,664	0/0:20,0:20:39.13:0,39,634	0/1:16,2:18:25.60:26,0,637	0/0:36,0:35:38.31:0,38,1137	0/0:37,1:38:38.32:0,38,1138	0/0:22,0:22:54.17:0,54,856	0/0:36,0:36:96.33:0,96,1564	0/0:10,0:10:15.05:0,15,245	1/1:4,17:22:54:630,54,0	0/1:20,2:22:62.74:63,0,496	0/0:21,0:21:51.17:0,51,823	0/0:20,1:20:14.24:0,14,745	0/1:17,1:17:6.83:7,0,409	0/0:34,1:35:35.32:0,35,1080	0/0:24,0:24:46.07:0,46,906	0/0:19,0:19:42.13:0,42,663	0/0:18,1:19:5.21:0,5,599	0/0:57,3:60:31.05:0,31,1479	0/0:21,0:21:45.15:0,45,722	1/1:3,9:12:27.08:329,27,0	1/1:9,21:28:60.19:732,60,0	0/0:20,1:21:8.19:0,8,622	0/0:19,1:20:11.22:0,11,675	0/0:20,0:20:42.14:0,42,673	0/1:16,2:18:25.68:26,0,587
chr10	37891587	.	ATG	A	7721.37	PASS	AB=0.600;AC=37;AF=0.661;AN=56;BaseQRankSum=-2.909;DP=819;FS=1.976;HRun=0;HaplotypeScore=179.4714;InbreedingCoeff=0.9113;MQ=53.94;MQ0=18;MQRankSum=-1.064;QD=15.54;ReadPosRankSum=0.456;VQSLOD=4.6537;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:47:34.09:168,34,0	1/1:2,11:13:18.05:213,18,0	0/0:82,0:16:15.05:0,15,238	0/0:73,0:19:10.38:0,10,237	0/0:5,0:21:18.01:0,18,179	0/1:7,14:21:9.82:355,0,10	1/1:11,26:37:72.04:832,72,0	1/1:18,14:32:25.58:454,26,0	0/0:8,0:23:48.01:0,48,461	1/1:7,28:36:84.06:959,84,0	1/1:2,11:13:24.07:284,24,0	1/1:9,0:31:39.59:194,40,0	0/0:6,0:20:29.99:0,30,263	0/0:8,0:27:44.98:0,45,392	1/1:6,17:23:36.58:428,37,0	0/0:6,0:17:33.02:0,33,332	0/0:10,0:34:72.45:0,72,651	1/1:13,13:26:53.55:610,54,0	1/1:7,13:20:36.02:377,36,0	1/1:6,13:19:33.10:391,33,0	1/1:12,39:55:74.89:846,75,0	0/0:12,0:23:41.75:0,42,437	1/1:2,0:12:19.89:98,20,0	1/1:17,0:26:14.20:70,14,0	1/1:4,18:22:36.11:427,36,0	1/1:6,0:20:42.61:210,43,0	1/1:4,21:26:57.01:653,57,0	1/1:5,0:15:31.25:154,31,0
chr10	37891664	.	CTCCT	C	1663.51	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=3.686;DP=626;FS=2.200;HRun=0;HaplotypeScore=171.9749;InbreedingCoeff=0.8874;MQ=65.66;MQ0=0;MQRankSum=-4.143;QD=24.83;ReadPosRankSum=0.962;VQSLOD=3.3260;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:93.30:0,93,2200	0/0:12,0:12:24.08:0,24,563	0/0:27,0:21:45.15:0,45,1017	0/1:22,0:17:2.60:3,0,446	0/0:18,0:18:51.18:0,51,1291	0/0:20,0:20:42.13:0,42,1011	0/0:24,0:24:60.17:0,60,1369	0/0:40,0:40:99:0,99,2095	0/0:23,0:23:63.22:0,63,1626	0/0:29,0:28:87.22:0,87,2084	0/0:15,0:15:45.14:0,45,1030	1/1:3,20:23:51.17:891,51,0	0/0:18,0:18:51.17:0,51,1279	0/0:23,0:23:54.16:0,54,1295	0/0:24,0:24:48.15:0,48,1123	0/0:24,0:24:60.20:0,60,1465	0/0:27,0:27:72.24:0,72,1705	0/0:31,0:31:87.30:0,87,2198	0/0:16,0:15:45.13:0,45,1051	0/0:15,0:15:42.14:0,42,1028	0/0:28,0:28:63.17:0,63,1531	0/0:12,0:11:33.10:0,33,758	1/1:3,10:13:30.10:537,30,0	1/1:1,8:9:21.07:376,21,0	0/0:23,0:23:63.22:0,63,1631	0/0:37,0:37:99:0,105,2602	0/0:22,0:22:42.13:0,42,989	0/0:13,0:13:33.11:0,33,857
chr10	37891735	.	AAT	A	8177.13	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=8.059;DP=524;FS=1.972;HRun=0;HaplotypeScore=73.2567;InbreedingCoeff=0.9956;MQ=72.20;MQ0=1;MQRankSum=-1.029;QD=35.09;ReadPosRankSum=1.851;VQSLOD=6.8977;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:84.29:0,84,1511	1/1:1,5:6:15.05:210,15,0	0/0:18,0:18:45.15:0,45,811	0/0:22,0:21:57.20:0,57,1003	0/0:29,0:29:78.12:0,78,1388	1/1:1,21:22:51.17:714,51,0	1/1:0,20:20:42.14:588,42,0	1/1:2,27:29:81.23:1110,81,0	0/0:13,0:13:39.13:0,39,686	1/1:2,16:18:48.16:669,48,0	1/1:1,14:15:42.10:565,42,0	0/0:16,0:16:27.09:0,27,462	0/0:21,0:21:54.18:0,54,953	0/0:20,0:20:57.19:0,57,1001	1/1:0,12:12:24.08:336,24,0	0/0:10,0:10:21.07:0,21,378	0/0:29,0:29:81.28:0,81,1450	1/1:3,23:25:60.11:877,60,0	1/1:2,22:24:66.22:923,66,0	1/1:0,7:7:18.06:252,18,0	1/1:1,20:21:57.19:798,57,0	0/0:11,0:11:33.11:0,33,586	0/0:17,0:17:48.16:0,48,865	0/0:16,0:16:39.13:0,39,702	1/1:1,12:13:33.11:462,33,0	0/0:25,0:25:66.22:0,66,1161	1/1:0,20:20:48.16:672,48,0	0/0:11,0:11:33.11:0,33,594
chr10	37891861	.	C	CT	1624.70	PASS	AB=0.894;AC=17;AF=0.304;AN=56;BaseQRankSum=-3.031;DP=415;FS=2.630;HRun=10;HaplotypeScore=79.4665;InbreedingCoeff=0.5921;MQ=61.07;MQ0=13;MQRankSum=-0.675;QD=10.55;ReadPosRankSum=0.773;VQSLOD=3.0433;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:11,16:24:37.25:325,37,0	0/1:6,1:7:19.91:20,0,55	0/0:26,0:18:19.44:0,19,194	0/0:23,0:12:12.98:0,13,142	1/1:5,12:17:20.84:224,21,0	0/0:9,0:9:5.99:0,6,49	0/0:17,0:16:8.94:0,9,65	0/0:28,0:24:52.91:0,53,416	1/1:7,2:9:11.90:111,12,0	0/0:11,0:10:8.96:0,9,70	0/0:7,0:7:11.90:0,12,89	0/0:7,0:7:5.84:0,6,49	1/1:7,10:17:5.35:239,5,0	1/1:5,14:19:11.41:315,11,0	0/0:7,0:7:5.91:0,6,42	1/1:6,10:16:27.03:276,27,0	0/1:19,6:23:12.37:230,0,12	0/0:23,0:23:12.97:0,13,75	0/0:19,0:17:28.60:0,29,208	0/0:8,0:8:11.98:0,12,98	0/0:11,0:10:8.98:0,9,74	1/1:6,6:12:6.02:64,6,0	0/0:13,0:12:1.05:0,1,104	0/0:7,0:6:11.99:0,12,99	0/1:5,0:5:5.72:6,0,39	0/0:17,0:17:20.91:0,21,172	0/0:14,0:13:27.43:0,27,222	0/0:13,0:12:32.96:0,33,271
chr10	37891873	.	TTTTCTTTTC	T	3766.31	PASS	AB=1.000;AC=24;AF=0.429;AN=56;BaseQRankSum=-4.160;DP=453;FS=8.806;HRun=0;HaplotypeScore=106.4823;InbreedingCoeff=0.8089;MQ=55.30;MQ0=25;MQRankSum=-2.337;QD=19.22;ReadPosRankSum=-4.798;VQSLOD=-0.0549;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:28:17.83:0,18,1414	1/1:6,0:6:9.02:127,9,0	0/0:21,0:12:26.84:0,27,387	0/0:22,0:11:12:0,12,208	0/0:21,0:21:47.52:0,48,1211	0/0:4,9:12:2.92:0,3,18	1/1:3,17:18:9.92:236,10,0	1/1:32,1:28:62.90:747,63,0	0/0:14,0:13:33.10:0,33,985	1/1:1,8:7:12:207,12,0	1/1:1,8:9:11.99:132,12,0	0/0:7,0:7:16.14:0,16,278	0/0:17,0:17:45.02:0,45,1120	0/0:16,0:16:35.71:0,36,1180	1/1:8,0:6:12.04:186,12,0	0/0:16,0:16:31.64:0,32,950	0/0:28,0:26:56.85:0,57,1495	1/1:8,22:27:15.05:421,15,0	1/1:18,0:17:41.99:505,42,0	1/1:15,1:16:38.55:443,39,0	0/1:11,0:9:12.99:121,0,13	0/0:9,0:9:15.04:0,15,479	0/0:13,0:12:12.14:0,12,663	0/1:9,0:7:1.91:2,0,343	1/1:5,0:4:8.98:97,9,0	0/0:17,0:16:45.09:0,45,1328	1/1:22,0:19:45.29:543,45,0	0/0:11,0:10:27.05:0,27,544
chr10	37892379	.	C	CT	2675.51	PASS	AB=0.724;AC=34;AF=0.607;AN=56;BaseQRankSum=-7.148;DP=549;FS=17.434;HRun=14;HaplotypeScore=90.8962;InbreedingCoeff=-0.0197;MQ=66.40;MQ0=6;MQRankSum=0.277;QD=5.83;ReadPosRankSum=-1.004;VQSLOD=0.6293;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:34:33.68:0,34,125	0/1:1,2:4:0.84:21,0,1	0/1:53,0:17:5.72:6,0,43	0/1:30,0:10:7.39:7,0,18	0/1:6,10:15:0.48:95,0,0	1/1:3,12:15:21:185,21,0	0/1:20,13:35:73.20:277,0,73	0/1:12,10:24:19.07:128,0,19	1/1:5,5:10:12:106,12,0	1/1:17,3:20:4.25:139,4,0	1/1:6,12:18:8.53:179,9,0	0/0:6,0:25:28.36:0,28,82	1/1:4,7:11:8.84:67,9,0	1/1:1,5:6:9:79,9,0	0/1:2,8:10:4.38:78,0,4	1/1:7,11:19:3.89:186,4,0	0/1:9,21:31:32.21:245,0,32	0/1:10,20:32:10.12:210,0,10	1/1:16,12:28:3.50:256,3,0	0/1:9,3:14:14.18:30,0,14	0/1:7,3:11:26.52:41,0,27	0/1:5,9:15:15.38:144,0,15	0/0:0,0:14:15.59:0,16,46	0/0:6,0:16:18.28:0,18,62	0/1:2,4:6:7.27:67,0,7	1/1:22,1:23:9.58:129,10,0	0/1:18,3:22:12.74:138,0,13	1/1:3,0:3:5.77:30,6,0
chr10	37892382	.	T	TC	554.57	PASS	AB=0.558;AC=3;AF=0.054;AN=56;BaseQRankSum=-3.449;DP=561;FS=6.293;HRun=0;HaplotypeScore=99.9871;InbreedingCoeff=0.4493;MQ=68.20;MQ0=6;MQRankSum=-1.059;QD=19.81;ReadPosRankSum=2.639;VQSLOD=5.7564;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,1:38:45.50:0,45,560	0/0:5,0:5:6.44:0,6,47	0/0:55,0:19:10.58:0,11,314	0/0:33,0:11:21.66:0,22,120	0/0:16,0:15:22.28:0,22,190	0/0:14,0:14:9.30:0,9,58	0/0:35,0:35:53.11:0,53,544	0/0:23,0:23:32.73:0,33,299	0/0:12,0:12:15.12:0,15,150	0/0:24,0:23:54.76:0,55,428	0/0:18,0:18:28.42:0,28,207	0/0:26,0:27:54.90:0,55,402	0/0:9,0:9:7.75:0,8,51	0/0:7,0:7:8.24:0,8,55	0/0:11,0:10:8.21:0,8,64	0/0:19,0:19:16.11:0,16,220	0/0:32,0:32:25.94:0,26,290	0/0:33,0:33:36.81:0,37,319	0/0:24,0:24:35.70:0,36,353	0/0:12,0:12:30.34:0,30,253	0/0:10,0:10:13.74:0,14,161	0/0:16,0:16:30.45:0,30,237	0/0:14,0:14:26.62:0,27,221	0/0:19,0:18:38.62:0,39,297	0/0:6,0:6:3.40:0,3,56	0/1:5,19:24:4.92:581,0,5	0/0:20,0:20:41.69:0,42,336	1/1:3,1:4:6.02:67,6,0
chr10	37892977	.	AT	A	1318.24	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.985;DP=646;FS=0.610;HRun=3;HaplotypeScore=62.0205;InbreedingCoeff=0.9625;MQ=84.47;MQ0=0;MQRankSum=-0.250;QD=30.66;ReadPosRankSum=1.329;VQSLOD=3.3254;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,43:43:99:1413,114,0	0/0:5,0:5:12.04:0,12,173	0/0:20,0:20:36.52:0,37,558	0/0:20,0:21:45.12:0,45,586	0/0:18,0:18:54.18:0,54,776	0/0:19,0:19:54.18:0,54,778	0/0:29,0:29:78.26:0,78,1123	0/0:20,0:20:60.19:0,60,832	0/0:26,0:26:78.26:0,78,1123	0/0:20,0:20:57.16:0,57,767	0/0:7,0:7:18.05:0,18,241	0/0:22,0:22:66.19:0,66,921	0/0:19,0:19:54.18:0,54,772	0/0:20,0:20:57.16:0,57,783	0/0:23,0:23:69.23:0,69,992	0/0:17,0:17:51.17:0,51,734	0/0:41,0:41:99:0,120,1665	0/0:24,0:24:72.24:0,72,1036	0/0:27,0:27:78.25:0,78,1103	0/0:18,0:18:54.17:0,54,760	0/0:42,0:42:99:0,126,1776	0/0:22,0:22:66.22:0,66,950	0/0:12,0:12:36.11:0,36,500	0/0:34,0:34:93.31:0,93,1338	0/0:28,0:28:78.24:0,78,1100	0/0:23,0:23:66.22:0,66,935	0/0:33,0:33:99:0,99,1407	0/0:13,0:13:39.13:0,39,558
chr10	37893140	.	AGACCCAG	A	4595.02	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=11.600;DP=684;FS=0.000;HRun=0;HaplotypeScore=161.0737;InbreedingCoeff=0.9971;MQ=87.47;MQ0=0;MQRankSum=-12.715;QD=52.22;ReadPosRankSum=0.440;VQSLOD=4.6464;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,123,4674	0/0:7,0:7:21.07:0,21,840	0/0:27,0:27:72.25:0,72,2467	0/0:28,0:28:80.76:0,81,2712	0/0:17,0:17:51.18:0,51,1962	0/0:18,0:18:54.16:0,54,1919	0/0:18,0:18:51.16:0,51,1942	0/0:25,0:25:72.25:0,72,2748	0/0:31,0:31:90.31:0,90,3523	0/0:19,0:19:51.17:0,51,1944	0/0:18,0:18:54.19:0,54,2115	1/1:4,31:35:90.31:2336,90,0	0/0:16,0:16:48.16:0,48,1920	0/0:26,0:26:72.20:0,72,2776	0/0:21,0:21:60.21:0,60,2400	0/0:24,0:24:72.25:0,72,2851	0/0:28,0:28:81.28:0,81,3215	0/0:20,0:20:57.20:0,57,2172	0/0:20,0:20:57.20:0,57,2177	0/0:16,0:16:45.15:0,45,1786	0/0:38,0:38:99:0,111,4192	0/0:29,0:29:84.20:0,84,3260	1/1:2,20:22:45.15:1168,45,0	1/1:6,25:31:42.56:1091,43,0	0/0:18,0:18:51.18:0,51,2018	0/0:36,0:36:99:0,108,4275	0/0:48,0:48:99:0,141,5598	0/0:7,0:7:21.07:0,21,838
chr10	37893317	.	G	GCT	8590.04	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-14.981;DP=755;FS=1.440;HRun=0;HaplotypeScore=94.4087;InbreedingCoeff=0.9990;MQ=86.94;MQ0=1;MQRankSum=-2.312;QD=43.83;ReadPosRankSum=2.574;VQSLOD=6.5972;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,102,1329	0/0:8,0:8:21.07:0,21,289	0/0:25,0:25:60.16:0,60,776	0/0:29,0:28:72.22:0,72,943	1/1:1,22:24:48.16:851,48,0	0/0:22,0:22:60.19:0,60,808	0/0:31,0:31:87.29:0,87,1195	0/0:26,0:26:72.23:0,72,973	1/1:2,24:26:54.08:921,54,0	0/0:26,0:26:63.21:0,63,861	0/0:16,0:16:45.14:0,45,602	0/0:33,0:33:93.31:0,93,1267	1/1:0,28:30:81.28:1435,81,0	1/1:1,30:31:81.28:1436,81,0	0/0:17,0:17:51.16:0,51,684	1/1:1,20:21:57.19:998,57,0	1/1:1,29:30:81.28:1437,81,0	0/0:18,0:18:48.16:0,48,657	0/0:20,0:20:25.03:0,25,747	0/0:26,0:26:63.20:0,63,844	0/0:46,0:46:99:0,117,1608	1/1:2,31:33:87.26:1511,87,0	0/0:22,0:22:63.21:0,63,865	0/0:19,0:19:51.17:0,51,701	0/0:30,0:30:78.26:0,78,1071	0/0:31,0:31:84.28:0,84,1151	0/0:46,0:46:99:0,123,1690	0/0:32,0:32:93.29:0,93,1260
chr10	37893402	.	GC	G	1012.16	PASS	AB=0.542;AC=3;AF=0.054;AN=56;BaseQRankSum=10.546;DP=731;FS=4.667;HRun=1;HaplotypeScore=86.7178;InbreedingCoeff=0.6459;MQ=90.40;MQ0=1;MQRankSum=-3.533;QD=22.00;ReadPosRankSum=4.101;VQSLOD=3.9379;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:90.26:0,90,1386	0/0:8,0:8:21.07:0,21,331	0/0:29,0:29:87.30:0,87,1391	0/0:34,0:34:96.08:0,96,1497	0/0:22,0:22:60.20:0,60,957	0/0:25,0:25:75.26:0,75,1194	0/0:31,0:31:93.24:0,93,1433	0/0:27,0:27:81.26:0,81,1249	0/0:35,0:35:93.29:0,93,1438	0/0:29,0:29:87.29:0,87,1348	0/0:22,0:22:60.19:0,60,935	0/0:27,0:27:81.25:0,81,1266	0/0:32,0:32:90.29:0,90,1414	0/0:25,0:25:60.20:0,60,958	0/0:28,0:28:84.23:0,84,1313	0/0:21,0:21:60.20:0,60,958	0/0:29,0:29:84.29:0,84,1334	0/0:23,0:23:69.24:0,69,1095	0/0:19,0:19:57.19:0,57,911	0/0:23,0:23:66.21:0,66,1022	0/0:37,0:37:99:0,111,1770	0/0:27,0:26:75.24:0,75,1174	0/0:14,0:14:42.14:0,42,670	0/0:32,0:32:96.31:0,96,1506	0/0:25,0:25:75.26:0,75,1199	0/1:4,22:25:68.99:583,0,69	0/0:31,0:31:90.31:0,90,1437	1/1:0,20:20:59.84:535,60,0
chr10	37893404	.	T	TGA	1970.16	PASS	AB=0.560;AC=3;AF=0.054;AN=56;BaseQRankSum=10.150;DP=741;FS=8.884;HRun=0;HaplotypeScore=100.1164;InbreedingCoeff=0.6468;MQ=90.41;MQ0=1;MQRankSum=-5.549;QD=38.63;ReadPosRankSum=3.086;VQSLOD=5.7512;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:84.24:0,84,1318	0/0:9,0:9:24.05:0,24,364	0/0:31,0:31:90.23:0,90,1389	0/0:33,0:33:93.27:0,93,1464	0/0:23,0:23:60.20:0,60,976	0/0:24,0:24:72.25:0,72,1174	0/0:31,0:31:93.32:0,93,1504	0/0:29,0:29:81.27:0,81,1298	0/0:34,0:34:90.31:0,90,1465	0/0:30,0:30:84.27:0,84,1340	0/0:22,0:22:60.20:0,60,971	0/0:26,0:26:78.27:0,78,1265	0/0:31,0:31:87.30:0,87,1419	0/0:25,0:25:60.20:0,60,979	0/0:28,0:28:84.29:0,84,1369	0/0:21,0:21:60.20:0,60,979	0/0:28,0:28:81.28:0,81,1309	0/0:24,0:24:69.24:0,69,1114	0/0:20,0:20:60.18:0,60,932	0/0:22,0:22:63.20:0,63,1000	0/0:41,0:41:99:0,117,1842	0/0:26,0:25:72.25:0,72,1162	0/0:15,0:15:42.14:0,42,681	0/0:32,0:32:93.30:0,93,1484	0/0:26,0:26:75.26:0,75,1224	0/1:6,22:27:68.44:1062,0,68	0/0:31,0:31:90.29:0,90,1443	1/1:3,20:23:69.21:1014,69,0
chr10	37893596	.	AGTGTGT	A	2895.37	PASS	AB=0.722;AC=33;AF=0.635;AN=52;BaseQRankSum=3.012;DP=708;FS=4.933;HRun=0;HaplotypeScore=224.3960;InbreedingCoeff=0.5230;MQ=62.17;MQ0=8;MQRankSum=-7.622;QD=5.87;ReadPosRankSum=-0.684;VQSLOD=2.3949;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:26:8.94:0,9,107	./.	./.	0/0:28,0:23:5.93:0,6,46	1/1:8,0:22:0.44:1,0,0	1/1:9,10:20:11.95:165,12,0	1/1:13,11:25:15.05:306,15,0	0/1:36,0:36:12.11:87,0,12	1/1:12,0:29:9.50:126,10,0	1/1:20,15:38:54.11:890,54,0	0/0:8,5:14:0:0,0,0	0/1:9,2:22:13.69:14,0,544	1/1:7,0:17:9:109,9,0	1/1:9,0:19:6.02:84,6,0	1/1:14,14:29:1.36:3,1,0	0/1:8,0:21:0:0,0,0	0/1:9,0:16:1.58:74,0,2	1/1:15,3:18:12.04:223,12,0	1/1:11,9:17:26.68:503,27,0	0/1:11,9:21:0.47:1,0,0	1/1:51,10:62:3:41,3,0	1/1:12,0:33:3.32:42,3,0	0/0:12,0:22:31.85:0,32,404	0/0:15,0:29:43.61:0,44,520	1/1:8,13:22:9.03:137,9,0	0/0:39,0:40:68.26:0,68,1941	1/1:13,4:20:17.99:252,18,0	0/0:24,0:25:12.25:0,12,1390
chr10	37893675	.	ATG	A	2930.28	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=6.593;DP=910;FS=11.470;HRun=0;HaplotypeScore=220.5218;InbreedingCoeff=0.9947;MQ=49.16;MQ0=10;MQRankSum=3.223;QD=25.70;ReadPosRankSum=1.862;VQSLOD=3.5189;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,13:21:16.49:233,16,0	0/0:8,0:8:21.07:0,21,357	0/0:74,0:32:75.22:0,75,1172	0/0:65,0:24:54.14:0,54,855	0/0:24,0:24:44.39:0,44,748	0/0:21,0:20:26.88:0,27,460	0/0:38,0:38:78.11:0,78,1273	0/0:47,0:47:96.29:0,96,1576	0/0:26,0:26:56.86:0,57,934	0/0:27,0:27:69.20:0,69,1142	0/0:19,0:19:44.97:0,45,734	1/1:4,24:28:72.23:924,72,0	0/0:22,0:22:47.10:0,47,773	0/0:38,0:38:86.53:0,87,1405	0/0:24,0:24:35.95:0,36,579	0/0:34,0:34:75.04:0,75,1262	0/0:24,0:24:40.78:0,41,653	0/0:18,0:17:24.08:0,24,393	0/0:20,0:18:39.13:0,39,656	0/0:34,0:35:90.20:0,90,1472	0/0:88,0:87:99:0,127,2174	0/0:34,0:34:62.88:0,63,1034	1/1:6,18:24:54.17:702,54,0	1/1:3,38:41:96.02:1231,96,0	0/0:27,0:27:71.83:0,72,1177	0/0:28,0:28:78.26:0,78,1294	0/0:23,0:23:69.24:0,69,1158	0/0:32,0:30:75.26:0,75,1242
chr10	37893732	.	TGC	T	107.85	PASS	AB=0.959;AC=4;AF=0.071;AN=56;BaseQRankSum=5.940;DP=976;FS=2.397;HRun=0;HaplotypeScore=261.5487;InbreedingCoeff=0.4248;MQ=48.70;MQ0=21;MQRankSum=-2.358;QD=1.30;ReadPosRankSum=-2.230;VQSLOD=1.8536;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:29,6:34:23.37:187,23,0	0/0:10,0:10:20.39:0,20,137	0/0:61,0:20:43.82:0,44,686	0/0:71,0:30:64.41:0,64,874	0/1:27,1:28:8.40:8,0,297	0/0:23,0:22:23.67:0,24,196	0/0:34,0:34:24.68:0,25,231	0/0:59,0:59:99:0,116,1108	0/0:26,0:26:21.11:0,21,489	0/0:47,0:46:99:0,129,1314	0/0:22,0:22:34.64:0,35,273	0/0:33,0:33:90.16:0,90,1170	0/0:21,0:21:41.75:0,42,664	0/0:31,0:30:62.99:0,63,984	0/0:27,0:27:31.62:0,32,224	0/0:34,0:34:36.50:0,36,951	0/0:31,1:31:2.51:0,3,464	0/1:19,1:19:23.04:23,0,69	0/0:27,1:25:38.83:0,39,482	0/0:43,0:43:61.91:0,62,525	0/0:63,0:62:89.79:0,90,742	0/0:28,0:28:49.85:0,50,815	0/0:21,0:21:53.98:0,54,647	0/0:55,1:56:99:0,138,1843	0/0:36,0:35:39.84:0,40,510	0/0:36,0:35:90.24:0,90,1584	0/0:25,0:25:61.30:0,61,549	0/0:26,0:24:69.22:0,69,1269
chr10	37893734	.	C	CGT	7423.87	PASS	AB=1.000;AC=30;AF=0.536;AN=56;BaseQRankSum=-1.218;DP=985;FS=20.944;HRun=0;HaplotypeScore=260.5314;InbreedingCoeff=0.7059;MQ=48.36;MQ0=21;MQRankSum=-4.954;QD=12.96;ReadPosRankSum=-4.576;VQSLOD=2.9166;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:33:34.26:95,0,34	1/1:8,2:10:14.52:161,15,0	0/0:59,0:20:27:0,27,302	0/0:66,0:27:42.97:0,43,462	0/1:28,0:28:2.54:3,0,158	1/1:7,17:23:11.11:145,11,0	1/1:13,25:39:19.48:118,19,0	1/1:25,34:60:99:1486,107,0	0/0:27,0:27:13.63:0,14,199	1/1:24,24:47:82.52:1689,83,0	1/1:14,8:22:25.59:306,26,0	0/0:32,0:32:66.07:0,66,820	0/0:21,0:21:35.53:0,36,387	0/0:30,0:29:37.84:0,38,488	1/1:8,22:30:16.27:141,16,0	0/0:34,0:34:11.40:0,11,462	0/1:32,0:31:27.72:28,0,199	1/1:8,14:21:14.18:176,14,0	1/1:24,4:25:45.95:617,46,0	1/1:28,16:44:14.53:533,15,0	1/1:63,3:65:32.73:872,33,0	0/0:30,0:30:31.67:0,32,449	0/0:21,0:21:48.14:0,48,580	0/0:55,0:55:99:0,132,1576	1/1:21,14:34:20.17:565,20,0	0/0:36,0:35:27.49:0,27,434	1/1:15,9:25:8.28:455,8,0	0/1:26,0:24:35.30:35,0,260
chr10	37893745	.	GTA	G	3029.77	PASS	AB=0.994;AC=26;AF=0.464;AN=56;BaseQRankSum=-3.630;DP=967;FS=25.771;HRun=0;HaplotypeScore=247.8752;InbreedingCoeff=-0.3835;MQ=49.10;MQ0=26;MQRankSum=8.526;QD=4.02;ReadPosRankSum=-2.372;VQSLOD=1.1118;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:41,0:39:32.27:187,32,0	0/1:8,0:8:14.76:30,0,15	0/0:51,0:16:17.30:0,17,355	0/0:66,0:27:30.70:0,31,387	0/1:28,0:28:76.32:84,0,76	0/1:23,0:22:33.96:34,0,36	0/1:39,0:39:42.51:60,0,43	0/1:50,0:50:99:475,0,198	0/1:29,0:29:1.19:1,0,136	0/1:47,0:46:99:131,0,339	0/1:21,0:21:9.54:103,0,10	0/1:27,0:27:73.03:73,0,117	0/1:23,0:23:15.49:15,0,270	0/1:29,0:28:11.39:11,0,386	0/1:30,0:30:5.64:6,0,51	0/1:30,1:31:52.51:53,0,303	0/1:34,0:33:95.16:95,0,141	0/1:22,1:22:57.63:82,0,58	0/1:28,0:22:96.41:135,0,96	0/1:40,0:40:35.48:263,0,35	1/1:68,0:67:39.81:588,40,0	0/0:29,0:29:42.44:0,42,346	1/1:20,0:20:12.61:116,13,0	0/1:54,1:55:99:307,0,162	0/1:33,0:32:99:259,0,110	0/0:39,0:38:77.18:0,77,998	0/1:25,1:26:90.85:91,0,104	0/0:27,0:24:66.07:0,66,694
chr10	37893747	.	ATG	A	2171.33	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=-5.947;DP=968;FS=0.490;HRun=0;HaplotypeScore=256.3057;InbreedingCoeff=0.6431;MQ=48.56;MQ0=26;MQRankSum=6.268;QD=16.08;ReadPosRankSum=3.985;VQSLOD=3.5135;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:40:7.79:0,8,61	0/0:6,0:8:7.31:0,7,29	0/0:52,0:16:22.54:0,23,276	0/0:67,0:26:27.84:0,28,296	0/0:30,0:30:1.97:0,2,54	0/0:20,0:21:11.55:0,12,92	0/0:33,0:40:24.59:0,25,123	0/0:47,0:47:54.17:0,54,412	0/0:29,0:30:8.72:0,9,52	0/0:37,0:47:97.77:0,98,788	0/0:18,0:21:7.67:0,8,35	1/1:10,13:26:50.42:502,50,0	0/0:25,0:25:18.41:0,18,160	0/0:29,0:28:15.03:0,15,188	0/0:23,0:28:19.95:0,20,122	0/1:29,0:30:5.72:6,0,56	0/0:33,0:32:2.70:0,3,115	0/0:23,0:23:13.51:0,14,92	0/0:24,0:21:32.34:0,32,253	0/0:34,0:39:16.18:0,16,106	0/0:64,0:64:9.20:0,9,73	0/0:21,0:31:6.37:0,6,35	1/1:5,16:21:45.11:501,45,0	1/1:29,29:58:99:1305,114,0	0/0:25,0:32:18.55:0,19,186	0/0:14,0:38:81.42:0,81,748	0/0:12,0:26:27.52:0,28,159	0/0:11,0:24:45:0,45,415
chr10	37893754	.	T	TGTGTGTGTGTGTGTGT	5251.47	PASS	AB=0.997;AC=40;AF=0.714;AN=56;BaseQRankSum=-6.405;DP=945;FS=0.451;HRun=0;HaplotypeScore=414.0461;InbreedingCoeff=0.5712;MQ=46.68;MQ0=22;MQRankSum=-2.189;QD=6.66;ReadPosRankSum=-8.492;VQSLOD=0.9116;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:43,0:41:17.75:385,18,0	0/1:9,0:9:0:0,0,0	0/1:48,0:19:2.28:2,0,132	0/1:61,0:28:2.02:2,0,137	1/1:29,0:29:18.05:241,18,0	1/1:21,0:20:11.97:121,12,0	1/1:42,0:42:15.46:153,15,0	1/1:43,0:43:60.96:525,61,0	1/1:18,13:34:5.45:47,5,0	1/1:47,0:46:88.37:925,88,0	0/1:19,0:19:0:0,0,0	0/0:28,0:28:40.63:0,41,1359	1/1:24,0:24:14.90:160,15,0	1/1:30,0:29:24.44:260,24,0	1/1:28,0:28:9.96:143,10,0	1/1:26,0:26:15.50:229,15,0	1/1:35,0:34:36.99:750,37,0	1/1:25,0:24:13.93:191,14,0	1/1:25,0:19:34.44:400,34,0	1/1:40,0:41:8.96:143,9,0	1/1:55,0:54:14.41:152,14,0	0/0:29,0:29:0.30:0,0,1	0/0:22,0:22:37.22:0,37,1104	0/0:53,0:53:41.63:0,42,2851	0/1:35,0:34:63.47:156,0,63	0/1:40,0:39:99:143,0,918	1/1:27,0:27:11.96:124,12,0	0/0:25,0:22:45.15:0,45,1081
chr10	37893862	.	T	TG	4130.20	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-10.955;DP=765;FS=2.381;HRun=1;HaplotypeScore=79.4190;InbreedingCoeff=0.9943;MQ=72.92;MQ0=0;MQRankSum=1.427;QD=39.71;ReadPosRankSum=2.072;VQSLOD=4.4295;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,138,1717	0/0:6,0:6:18.06:0,18,234	0/0:31,0:31:81:0,81,978	0/0:22,0:22:63.17:0,63,749	0/0:26,0:26:72.14:0,72,895	0/0:23,0:23:63.20:0,63,817	0/0:20,0:20:60.17:0,60,743	0/0:46,0:46:99:0,129,1598	0/0:32,0:32:90.29:0,90,1167	0/0:35,0:35:99:0,102,1288	0/0:19,0:19:54.15:0,54,670	1/1:0,30:30:81.27:1213,81,0	0/0:26,0:26:72.23:0,72,934	0/0:29,0:28:74.77:0,75,930	0/0:24,0:24:69.21:0,69,881	0/0:27,0:27:81.26:0,81,1040	0/0:24,0:23:63.11:0,63,764	0/0:24,0:24:72.18:0,72,900	0/0:25,0:25:72.23:0,72,935	0/0:18,0:18:54.07:0,54,677	0/0:35,0:34:99:0,99,1198	0/0:33,0:33:99:0,99,1237	1/1:0,34:34:90.30:1344,90,0	1/1:1,39:40:99:1573,105,0	0/0:26,0:26:78.25:0,78,1001	0/0:28,0:28:84.27:0,84,1079	0/0:29,0:29:87.27:0,87,1114	0/0:6,0:6:18.04:0,18,217
chr10	37895572	.	TCACA	T	1251.04	PASS	AB=0.907;AC=15;AF=0.288;AN=52;BaseQRankSum=-2.088;DP=706;FS=10.801;HRun=0;HaplotypeScore=146.3049;InbreedingCoeff=0.6523;MQ=64.14;MQ0=8;MQRankSum=-0.376;QD=6.10;ReadPosRankSum=1.156;VQSLOD=2.1899;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:35.70:0,36,569	0/0:10,0:10:5.70:0,6,98	./.	./.	0/1:11,5:16:0:1,0,0	0/0:28,0:28:11.91:0,12,224	0/0:28,0:28:3.01:0,3,45	0/0:35,0:35:6.70:0,7,29	1/1:22,4:26:20.80:272,21,0	0/1:22,0:22:7.18:7,0,141	0/0:20,0:20:2.34:0,2,32	0/0:22,0:22:21.07:0,21,444	1/1:17,7:23:8.69:138,9,0	1/1:17,5:22:3.01:46,3,0	0/0:38,0:38:21.07:0,21,330	1/1:12,4:16:15.04:228,15,0	1/1:18,5:23:30.09:437,30,0	0/0:24,0:23:16.61:0,17,266	0/0:25,0:25:12.04:0,12,161	0/0:10,0:10:2.60:0,3,45	0/0:41,0:40:18.06:0,18,270	1/1:20,3:26:21.05:285,21,0	0/1:28,0:28:0.01:1,0,0	0/0:36,0:36:20.51:0,21,312	0/0:14,0:13:12.04:0,12,154	0/0:25,0:30:11.94:0,12,121	0/0:17,0:17:12.04:0,12,192	0/0:12,0:16:14.57:0,15,101
chr10	37895573	.	C	CACACAT	4735.10	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=-7.689;DP=710;FS=17.003;HRun=0;HaplotypeScore=171.2114;InbreedingCoeff=0.0404;MQ=63.87;MQ0=8;MQRankSum=2.617;QD=9.07;ReadPosRankSum=4.731;VQSLOD=2.1855;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:37,0:37:37.38:681,37,0	0/1:10,0:10:2.87:3,0,3	0/0:34,0:22:56.84:0,57,505	0/0:36,0:21:53.97:0,54,546	1/1:16,0:16:23.31:191,23,0	0/1:29,0:29:0.28:0,0,96	1/1:28,0:28:3.01:40,3,0	1/1:34,0:34:59.66:519,60,0	0/1:26,0:26:99:322,0,128	1/1:23,0:22:53.15:401,53,0	0/0:20,0:20:3.60:0,4,37	0/0:22,0:22:9.65:0,10,292	0/1:24,0:23:59.54:225,0,60	1/1:21,0:21:24.14:289,24,0	0/0:38,0:38:13.98:0,14,152	0/1:17,0:17:53.71:177,0,54	0/1:25,0:24:99:174,0,204	0/1:25,0:24:13.01:13,0,125	1/1:25,0:25:48.21:452,48,0	0/0:10,0:10:1.81:0,2,9	0/1:40,0:39:9.90:45,0,10	0/1:26,0:26:81.25:277,0,81	0/0:2,26:28:1.21:0,1,6	0/1:36,0:36:26.78:27,0,102	0/1:14,0:13:18.87:19,0,65	1/1:30,0:30:54.30:600,54,0	0/1:19,0:19:63.05:82,0,63	0/1:17,0:17:24.75:196,0,25
chr10	37895577	.	C	CAT	5751.10	PASS	AB=0.896;AC=40;AF=0.714;AN=56;BaseQRankSum=-1.368;DP=713;FS=38.987;HRun=0;HaplotypeScore=119.2406;InbreedingCoeff=0.1692;MQ=62.59;MQ0=12;MQRankSum=2.437;QD=9.62;ReadPosRankSum=7.421;VQSLOD=2.5964;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:36,2:38:17.44:513,17,0	1/1:10,0:10:5.96:91,6,0	0/0:33,0:21:56.76:0,57,505	0/0:36,0:21:53.69:0,54,545	1/1:16,0:16:23.88:192,24,0	0/1:30,0:29:61.01:61,0,69	0/1:29,0:29:12.97:34,0,13	1/1:30,0:30:20.38:461,20,0	1/1:25,0:26:25.89:374,26,0	1/1:24,0:22:33.81:391,34,0	0/0:19,0:19:1.52:0,2,7	0/1:8,15:24:34.48:34,0,148	1/1:24,0:23:11.83:249,12,0	1/1:22,0:22:41.31:317,41,0	0/1:37,0:37:16.84:125,0,17	1/1:19,0:19:36.38:249,36,0	1/1:27,0:26:9.99:237,10,0	0/1:25,0:24:51.34:59,0,51	1/1:22,0:22:23.12:416,23,0	1/1:9,0:9:2.96:37,3,0	1/1:42,0:39:20.73:241,21,0	1/1:26,0:26:51.42:368,51,0	0/0:27,0:27:0.40:0,0,5	0/1:9,29:38:31.04:258,0,31	0/1:14,0:13:4.02:68,0,4	1/1:30,0:30:58.75:626,59,0	0/1:19,0:19:31.59:93,0,32	1/1:17,0:17:30.03:257,30,0
chr10	37895578	.	A	ATG	4143.79	PASS	AB=0.716;AC=25;AF=0.446;AN=56;BaseQRankSum=-8.482;DP=712;FS=6.691;HRun=0;HaplotypeScore=124.5134;InbreedingCoeff=0.0836;MQ=62.53;MQ0=13;MQRankSum=3.230;QD=9.11;ReadPosRankSum=2.200;VQSLOD=3.1110;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:38,0:38:98.91:99,0,117	1/1:1,9:11:5.96:97,6,0	0/0:33,0:21:57.02:0,57,858	0/0:36,0:21:53.79:0,54,818	1/1:15,0:15:1.35:4,1,0	0/1:6,21:27:99:104,0,112	0/1:5,23:30:30.27:54,0,30	0/1:8,21:30:6.57:970,0,7	0/0:26,0:26:18.76:0,19,98	1/1:6,19:23:10.40:828,10,0	1/1:2,16:19:2.76:18,3,0	0/1:23,0:23:9.04:9,0,254	0/0:24,0:23:7.63:0,8,51	0/0:22,0:22:6.43:0,6,23	0/1:6,30:37:15.70:182,0,16	0/0:19,0:19:14.01:0,14,50	0/0:27,0:26:28.93:0,29,155	0/1:5,20:24:69.51:114,0,70	0/1:4,17:22:4.42:777,0,4	1/1:0,9:9:2.96:62,3,0	1/1:11,32:39:13.83:357,14,0	0/0:26,0:26:17.99:0,18,74	0/0:27,0:27:1.05:0,1,16	0/1:39,0:39:67.60:133,0,68	1/1:3,10:12:11.90:157,12,0	0/1:30,0:30:10.80:11,0,65	0/1:3,15:18:30.62:167,0,31	0/0:17,0:17:13.91:0,14,64
chr10	37896508	.	GC	G	4867.08	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=8.714;DP=737;FS=0.000;HRun=2;HaplotypeScore=78.9762;InbreedingCoeff=0.9997;MQ=84.37;MQ0=0;MQRankSum=-2.279;QD=34.76;ReadPosRankSum=1.998;VQSLOD=5.2130;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,55:56:99:2063,160,0	0/0:16,0:16:48.16:0,48,716	0/0:22,0:22:63.17:0,63,904	0/0:22,0:22:57.18:0,57,806	0/0:16,0:16:48.16:0,48,710	0/0:16,0:16:48.16:0,48,720	0/0:40,0:40:99:0,117,1749	0/0:24,0:24:60.20:0,60,899	0/0:38,0:38:99:0,111,1656	0/0:31,0:31:90.29:0,90,1313	0/0:19,0:19:51.17:0,51,763	1/1:0,38:38:90.29:1168,90,0	0/0:32,0:32:96.31:0,96,1418	0/0:18,0:18:54.18:0,54,808	0/0:30,0:30:90.28:0,90,1309	0/0:23,0:23:69.23:0,69,1033	0/0:43,0:43:99:0,126,1845	0/0:25,0:25:72.24:0,72,1074	0/0:25,0:25:72.24:0,72,1079	0/0:10,0:10:30.10:0,30,450	0/0:45,0:43:99:0,135,1978	0/0:21,0:21:63.21:0,63,933	1/1:1,13:14:33.11:428,33,0	1/1:0,32:32:93.30:1207,93,0	0/0:24,0:24:69.23:0,69,1033	0/0:24,0:24:69.23:0,69,1033	0/0:21,0:21:60.20:0,60,898	0/0:12,0:12:33.11:0,33,495
chr10	37897120	.	AG	A	13032.63	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=12.439;DP=921;FS=3.917;HRun=4;HaplotypeScore=90.9958;InbreedingCoeff=0.9999;MQ=85.85;MQ0=0;MQRankSum=-3.883;QD=32.66;ReadPosRankSum=0.082;VQSLOD=5.0764;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,144,1999	1/1:0,12:12:36.11:431,36,0	0/0:28,0:28:75.23:0,75,1027	0/0:30,0:30:81.27:0,81,1129	0/0:32,0:32:87.29:0,87,1214	1/1:2,24:26:63.19:756,63,0	1/1:6,36:42:99:1188,99,0	1/1:1,24:25:75.23:900,75,0	0/0:32,0:32:90.22:0,90,1234	1/1:2,29:31:87.26:1034,87,0	1/1:1,22:23:69.21:826,69,0	0/0:41,0:41:99:0,114,1597	0/0:37,0:37:99:0,105,1432	0/0:49,0:49:99:0,138,1904	1/1:1,38:39:99:1367,114,0	0/0:33,0:33:93.31:0,93,1302	0/0:50,0:50:99:0,141,1955	1/1:0,34:34:99:1188,99,0	1/1:1,24:25:72.20:842,72,0	1/1:2,25:27:75.23:900,75,0	1/1:1,60:61:99:1908,159,0	0/0:39,0:39:99:0,117,1605	0/0:27,0:27:81.22:0,81,1087	0/0:33,0:33:99:0,99,1386	1/1:0,26:26:75.23:900,75,0	0/0:30,0:30:84.27:0,84,1161	1/1:2,26:28:66.20:792,66,0	0/0:11,0:11:33.11:0,33,459
chr10	37897472	.	TC	T	744.26	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.893;DP=567;FS=4.270;HRun=1;HaplotypeScore=54.3610;InbreedingCoeff=0.9937;MQ=81.53;MQ0=1;MQRankSum=-3.730;QD=33.83;ReadPosRankSum=0.728;VQSLOD=3.2253;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,22:22:60.20:839,60,0	0/0:9,0:9:27.09:0,27,432	0/0:17,0:17:48.16:0,48,736	0/0:12,0:12:36.06:0,36,481	0/0:36,0:36:99:0,108,1722	0/0:24,0:24:72.25:0,72,1149	0/0:19,0:19:57.19:0,57,911	0/0:23,0:23:69.23:0,69,1080	0/0:16,0:16:48.16:0,48,767	0/0:24,0:24:72.25:0,72,1150	0/0:17,0:17:51.16:0,51,775	0/0:17,0:17:51.17:0,51,801	0/0:23,0:23:69.19:0,69,1033	0/0:17,0:17:51.15:0,51,790	0/0:21,0:21:63.21:0,63,1005	0/0:13,0:13:36.12:0,36,575	0/0:22,0:22:66.23:0,66,1052	0/0:21,0:20:57.19:0,57,910	0/0:26,0:26:78.23:0,78,1175	0/0:29,0:29:83.93:0,84,1294	0/0:8,0:8:21.06:0,21,313	0/0:34,0:34:99:0,102,1554	0/0:32,0:32:96.31:0,96,1508	0/0:18,0:18:54.18:0,54,858	0/0:19,0:19:57.19:0,57,911	0/0:20,0:20:60.20:0,60,919	0/0:19,0:19:57.16:0,57,863	0/0:9,0:9:27.09:0,27,432
chr10	37898424	.	C	CCCTCCCTT	3209.78	PASS	AB=1.000;AC=33;AF=0.589;AN=56;BaseQRankSum=9.012;DP=307;FS=7.533;HRun=0;HaplotypeScore=110.3179;InbreedingCoeff=-0.1991;MQ=44.71;MQ0=7;MQRankSum=-4.997;QD=11.38;ReadPosRankSum=-0.442;VQSLOD=1.8083;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:5,0:5:34.10:34,0,34	0/1:6,0:6:20.05:45,0,20	0/0:5,0:2:2.90:0,3,16	0/0:13,0:6:8.81:0,9,72	0/0:3,0:3:2.99:0,3,24	0/1:14,0:13:94.46:94,0,100	0/1:15,0:15:79.23:79,0,151	0/1:23,0:22:99:121,0,140	1/1:6,0:6:14.93:116,15,0	1/1:24,0:23:13.71:325,14,0	1/1:13,0:13:0.74:180,1,0	0/0:2,0:2:0:0,0,0	1/1:3,0:3:8.90:65,9,0	1/1:2,5:9:3.01:131,3,0	0/1:25,0:24:64.21:327,0,64	1/1:4,5:9:4.26:135,4,0	1/1:11,0:10:20.93:169,21,0	0/1:10,0:10:28.49:149,0,28	0/1:8,0:8:32.91:37,0,33	0/1:19,0:18:99:138,0,103	0/1:20,0:19:99:110,0,145	1/1:1,7:9:11.90:186,12,0	0/1:4,0:4:17.33:17,0,32	0/0:2,0:2:2.99:0,3,24	0/1:14,0:14:60.04:286,0,60	1/1:16,0:15:8.05:370,8,0	1/1:10,0:10:3.94:191,4,0	0/1:8,0:8:46.61:61,0,47
chr10	37898821	.	A	AT	616.53	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-3.981;DP=673;FS=0.000;HRun=9;HaplotypeScore=71.3761;InbreedingCoeff=0.8777;MQ=76.66;MQ0=0;MQRankSum=-1.130;QD=19.89;ReadPosRankSum=-1.237;VQSLOD=3.4561;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,25:31:23.10:709,23,0	0/0:8,0:8:17.99:0,18,156	0/0:14,0:14:22.96:0,23,181	0/0:17,0:17:15.31:0,15,160	0/0:28,0:28:71.94:0,72,620	0/0:26,0:26:68.95:0,69,592	0/0:30,0:30:77.98:0,78,677	0/0:34,0:35:79.98:0,80,677	0/0:34,0:34:88.99:0,89,758	0/0:30,0:31:53.97:0,54,631	0/0:15,0:15:38.99:0,39,339	0/0:16,0:16:44.99:0,45,391	0/0:30,0:30:77.92:0,78,670	0/0:20,0:20:35.59:0,36,463	0/0:35,0:35:89.96:0,90,781	0/0:25,0:25:74.99:0,75,651	0/0:30,0:30:83.95:0,84,722	0/0:16,1:17:5.81:0,6,279	0/0:24,0:24:59.98:0,60,521	0/0:27,0:27:65.97:0,66,573	0/0:23,0:23:62.96:0,63,542	0/0:23,0:23:56.96:0,57,495	0/0:34,0:35:94.99:0,95,807	0/0:15,0:15:41.97:0,42,360	0/0:21,0:22:53.01:0,53,447	0/0:31,0:31:86.97:0,87,753	0/0:21,0:21:59.97:0,60,517	0/0:10,0:10:26.99:0,27,234
chr10	37900296	.	G	GA	1312.33	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.543;DP=674;FS=0.604;HRun=6;HaplotypeScore=65.0210;InbreedingCoeff=0.9947;MQ=73.40;MQ0=1;MQRankSum=-0.810;QD=29.16;ReadPosRankSum=1.168;VQSLOD=4.2975;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,42:45:99:1407,114,0	0/0:15,0:15:45.10:0,45,459	0/0:21,0:21:21.16:0,21,309	0/0:19,0:18:34.25:0,34,306	0/0:23,0:23:63.11:0,63,634	0/0:25,0:25:69.12:0,69,690	0/0:18,0:18:48.08:0,48,476	0/0:38,0:38:99:0,108,1087	0/0:31,0:31:72.12:0,72,724	0/0:35,0:35:99:0,99,995	0/0:31,1:32:55.44:0,55,869	0/0:19,0:19:54.11:0,54,544	0/0:12,0:12:36.08:0,36,367	0/0:16,0:16:45.10:0,45,459	0/0:15,0:15:45.10:0,45,459	0/0:24,0:24:54.10:0,54,545	0/0:32,0:32:96.18:0,96,964	0/0:17,0:17:51.11:0,51,519	0/0:33,0:33:81.15:0,81,813	0/0:33,0:33:93.20:0,93,942	0/0:9,0:9:27.06:0,27,275	0/0:20,0:20:60.14:0,60,612	0/0:21,0:21:54.12:0,54,551	0/0:17,0:17:48.09:0,48,483	0/0:21,0:20:54.12:0,54,551	0/0:32,0:32:87.19:0,87,882	0/0:26,0:25:72.12:0,72,723	0/0:25,0:25:69.16:0,69,704
chr10	37900878	.	G	GAA	11185.41	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-0.943;DP=573;FS=4.241;HRun=9;HaplotypeScore=104.0068;InbreedingCoeff=0.9459;MQ=68.07;MQ0=1;MQRankSum=-2.631;QD=24.16;ReadPosRankSum=0.658;VQSLOD=4.4750;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:41.13:0,41,445	1/1:3,8:11:21.07:323,21,0	0/0:16,0:16:32.98:0,33,327	0/0:12,0:10:15:0,15,159	1/1:2,1:25:57.91:234,58,0	1/1:1,17:19:36.12:554,36,0	1/1:3,14:17:36.12:554,36,0	1/1:3,31:37:96.14:1261,96,0	1/1:2,0:15:27.45:94,27,0	1/1:7,23:32:74.67:1009,75,0	1/1:3,26:32:81.18:1176,81,0	1/1:3,0:10:14.85:51,15,0	1/1:2,0:12:22.32:77,22,0	1/1:2,0:16:35.82:122,36,0	1/1:2,17:21:46.65:663,47,0	1/1:4,0:11:16.86:59,17,0	1/1:2,0:21:15.99:122,16,0	1/1:6,16:27:65.38:843,65,0	1/1:4,18:23:54.13:731,54,0	1/1:2,16:18:48.09:688,48,0	1/1:1,8:9:21.07:323,21,0	1/1:2,0:21:43.36:168,43,0	1/1:4,0:23:46.95:160,47,0	1/1:0,0:10:24.95:86,25,0	1/1:3,22:25:63.21:970,63,0	0/0:43,2:45:3.68:0,4,901	1/1:3,20:26:63.20:918,63,0	0/0:12,0:13:30.03:0,30,374
chr10	37901349	.	C	CTGTT	33526.39	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-7.012;DP=602;FS=6.410;HRun=0;HaplotypeScore=97.9583;InbreedingCoeff=0.9642;MQ=79.24;MQ0=1;MQRankSum=-9.365;QD=60.74;ReadPosRankSum=5.459;VQSLOD=6.8124;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,44:49:99:2998,122,0	1/1:0,4:6:8.83:243,9,0	0/0:21,0:21:45.10:0,45,772	0/0:29,0:28:49.90:0,50,958	1/1:2,18:20:50.94:1071,51,0	1/1:0,9:9:18.06:485,18,0	1/1:3,29:33:87.17:2164,87,0	1/1:8,12:22:63.13:1343,63,0	1/1:1,12:16:36.08:904,36,0	1/1:6,13:19:48.16:1274,48,0	1/1:2,15:17:47.91:929,48,0	1/1:2,18:21:54.15:1397,54,0	1/1:1,17:18:42.10:1072,42,0	1/1:2,22:25:69.19:1798,69,0	1/1:1,14:17:45.15:1202,45,0	1/1:3,15:18:48.10:1167,48,0	1/1:1,47:50:99:3183,123,0	1/1:1,11:12:30.10:809,30,0	1/1:4,13:19:51.18:1371,51,0	1/1:1,10:11:29.89:504,30,0	1/1:1,33:38:87.08:2043,87,0	1/1:3,17:21:62.96:1322,63,0	1/1:5,16:22:44.70:908,45,0	1/1:5,23:30:56.92:1355,57,0	1/1:0,11:11:33.11:891,33,0	1/1:1,23:24:69.21:1740,69,0	1/1:1,10:11:29.97:627,30,0	1/1:0,11:13:27.09:727,27,0
chr10	37902071	.	C	CTTTTTG	23281.59	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-2.647;DP=572;FS=0.000;HRun=0;HaplotypeScore=120.7420;InbreedingCoeff=0.7042;MQ=51.05;MQ0=2;MQRankSum=-2.944;QD=43.60;ReadPosRankSum=1.762;VQSLOD=4.3713;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:26:54.18:1443,54,0	1/1:3,0:3:6.02:176,6,0	0/0:14,0:7:3:0,3,60	0/0:23,0:13:5.53:0,6,84	1/1:15,13:29:42.14:1286,42,0	1/1:21,0:21:42.14:1245,42,0	1/1:12,0:12:18.06:529,18,0	1/1:37,0:37:39.13:994,39,0	1/1:6,4:10:12.04:392,12,0	1/1:24,0:24:51.18:1481,51,0	1/1:23,0:23:36.12:1047,36,0	1/1:18,0:18:27.09:789,27,0	1/1:11,8:19:24.08:783,24,0	1/1:16,7:24:23.97:765,24,0	1/1:25,0:25:33.11:966,33,0	1/1:5,10:16:21.07:686,21,0	1/1:11,10:21:29.97:894,30,0	1/1:14,0:14:24.08:675,24,0	1/1:25,0:24:15.04:326,15,0	1/1:24,0:24:51.18:1478,51,0	1/1:5,0:5:6.02:144,6,0	1/1:8,11:20:33.11:1078,33,0	1/1:25,0:25:41.78:1217,42,0	1/1:21,0:21:33.11:868,33,0	1/1:16,0:16:21.07:610,21,0	1/1:36,0:36:54.18:1606,54,0	1/1:25,0:26:42.14:1204,42,0	1/1:13,0:13:21.07:601,21,0
chr10	37902088	.	T	TGTTTTC	29171.45	PASS	AB=0.990;AC=45;AF=0.804;AN=56;BaseQRankSum=-4.943;DP=647;FS=13.865;HRun=0;HaplotypeScore=122.4476;InbreedingCoeff=0.1897;MQ=51.28;MQ0=3;MQRankSum=-7.991;QD=49.11;ReadPosRankSum=8.446;VQSLOD=3.4485;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,29:35:63.21:2031,63,0	1/1:1,4:6:10.28:283,10,0	0/0:22,0:12:26.03:0,26,281	0/0:30,0:21:41.53:0,42,442	0/1:24,0:24:99:909,0,157	1/1:2,18:22:42.14:1447,42,0	1/1:4,8:12:24.08:821,24,0	1/1:10,21:33:80.85:1785,81,0	0/1:13,1:14:99:299,0,148	1/1:3,22:26:71.96:2085,72,0	1/1:6,20:26:25.16:1349,25,0	1/1:8,13:24:39.13:1188,39,0	0/1:14,0:14:66.69:593,0,67	0/1:19,0:19:99:359,0,149	1/1:3,19:24:39.13:1277,39,0	0/1:21,0:21:99:502,0,205	0/1:24,0:24:99:576,0,210	1/1:4,19:27:30.10:991,30,0	1/1:9,11:20:46.95:820,47,0	1/1:3,32:36:94.88:2226,95,0	1/1:3,8:12:6.02:180,6,0	0/1:21,0:21:82.84:815,0,83	1/1:7,23:33:65.57:1809,66,0	1/1:2,23:27:39.13:1199,39,0	1/1:3,13:18:21.07:725,21,0	1/1:6,27:36:96.01:2396,96,0	1/1:8,15:26:56.68:1782,57,0	1/1:4,9:12:21.07:722,21,0
chr10	37902558	.	G	GT	2189.26	PASS	AB=0.891;AC=21;AF=0.375;AN=56;BaseQRankSum=-4.088;DP=553;FS=0.839;HRun=13;HaplotypeScore=67.5360;InbreedingCoeff=0.4928;MQ=74.34;MQ0=3;MQRankSum=0.946;QD=7.35;ReadPosRankSum=0.239;VQSLOD=2.4666;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,1:30:37.56:201,38,0	0/0:10,0:10:23.79:0,24,164	0/1:26,0:19:8.03:8,0,97	0/1:13,0:9:5.37:5,0,15	1/1:9,23:34:10.21:479,10,0	0/0:18,0:18:41.56:0,42,286	0/1:8,1:10:14.51:15,0,102	0/1:23,4:29:7.57:8,0,209	1/1:8,10:18:38.87:344,39,0	0/0:32,0:33:26.09:0,26,426	0/1:18,1:20:11.31:11,0,191	0/0:15,0:16:19.75:0,20,195	1/1:7,14:22:29.20:300,29,0	1/1:3,6:9:18.02:167,18,0	0/0:13,0:14:17.06:0,17,222	0/1:4,11:16:11.29:180,0,11	1/1:5,18:23:39.04:362,39,0	0/0:19,1:20:24.78:0,25,307	0/1:23,2:26:1.68:2,0,229	0/0:17,2:21:11.83:0,12,210	0/0:6,0:6:12.77:0,13,83	1/1:8,11:20:35.75:301,36,0	0/0:26,0:26:68.25:0,68,470	0/0:12,0:12:26.70:0,27,185	0/0:13,1:14:9.87:0,10,202	0/0:16,0:16:2.53:0,3,139	0/0:24,0:29:62.53:0,63,405	0/0:19,0:19:50.58:0,51,349
chr10	37903142	.	AT	A	2770.49	PASS	AB=0.900;AC=15;AF=0.268;AN=56;BaseQRankSum=6.680;DP=601;FS=0.806;HRun=9;HaplotypeScore=83.9095;InbreedingCoeff=0.9239;MQ=65.13;MQ0=2;MQRankSum=0.989;QD=19.24;ReadPosRankSum=3.133;VQSLOD=3.9898;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,3:49:66.75:0,67,1259	0/0:7,0:7:21.06:0,21,242	0/0:27,0:20:39.85:0,40,450	0/0:17,0:13:28.88:0,29,302	1/1:4,24:28:66.03:603,66,0	0/0:19,0:19:57.17:0,57,658	0/0:18,0:18:50.94:0,51,565	0/0:27,0:27:69.17:0,69,781	1/1:3,13:16:33.01:302,33,0	0/0:31,0:31:84.24:0,84,960	0/0:14,0:14:36.11:0,36,415	0/0:20,0:20:57.17:0,57,657	1/1:1,16:16:45.02:412,45,0	1/1:2,16:18:42.02:384,42,0	0/0:19,0:19:46.02:0,46,521	1/1:0,12:12:33.02:302,33,0	1/1:4,30:34:81.04:741,81,0	0/0:29,0:29:79.47:0,79,897	0/0:30,0:30:78.23:0,78,900	0/0:19,0:19:51.15:0,51,589	0/0:17,0:16:42.12:0,42,485	1/1:1,9:10:24.01:220,24,0	0/0:25,0:25:69.20:0,69,796	0/0:29,0:28:72.21:0,72,831	0/0:22,0:22:40.34:0,40,670	0/0:17,0:17:45.13:0,45,512	0/0:21,0:20:60.16:0,60,682	0/1:8,1:9:6.42:6,0,176
chr10	37904163	.	CAGTT	C	1926.57	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-0.233;DP=675;FS=4.150;HRun=0;HaplotypeScore=134.8645;InbreedingCoeff=0.9440;MQ=75.33;MQ0=0;MQRankSum=-4.518;QD=45.87;ReadPosRankSum=-0.148;VQSLOD=4.2605;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,42:42:99:2021,102,0	0/0:10,0:10:30.10:0,30,829	0/0:14,0:14:37.94:0,38,986	0/0:11,0:11:33.11:0,33,948	0/0:24,0:24:68.71:0,69,1845	0/0:26,0:26:78.24:0,78,2117	0/0:22,0:22:66.23:0,66,1877	0/0:34,0:34:99:0,99,2805	0/0:29,0:29:87.27:0,87,2339	0/0:26,0:26:78.27:0,78,2227	0/0:15,0:15:45.13:0,45,1083	0/0:31,0:31:93.31:0,93,2582	0/0:23,0:23:69.21:0,69,1822	0/0:34,0:34:99:0,102,2836	0/0:39,0:39:99:0,117,3328	0/0:22,0:22:66.22:0,66,1837	0/0:32,0:32:96.33:0,96,2743	0/0:22,0:22:66.22:0,66,1775	0/0:20,0:20:60.20:0,60,1645	0/0:18,0:18:54.17:0,54,1389	0/0:46,0:46:99:0,135,3488	0/0:21,0:21:63.20:0,63,1679	0/0:13,0:13:36.12:0,36,973	0/0:27,0:27:81.24:0,81,2204	0/0:23,0:23:69.24:0,69,1999	0/0:29,0:29:87.30:0,87,2507	0/0:18,0:18:54.19:0,54,1544	0/0:4,0:4:9:0,9,195
chr10	37905544	.	TACAC	T	1705.83	PASS	AB=0.760;AC=15;AF=0.288;AN=52;BaseQRankSum=-4.468;DP=569;FS=0.667;HRun=0;HaplotypeScore=97.3718;InbreedingCoeff=0.7511;MQ=66.89;MQ0=12;MQRankSum=-0.131;QD=11.22;ReadPosRankSum=1.671;VQSLOD=2.4061;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:22:9.03:0,9,161	0/0:4,0:4:3.01:0,3,52	./.	./.	1/1:11,3:16:6.76:188,7,0	0/0:15,0:17:27.04:0,27,509	0/0:15,0:19:12.04:0,12,244	0/0:16,0:15:15.01:0,15,227	1/1:5,7:12:12.04:188,12,0	0/0:12,0:25:36.59:0,37,689	0/0:14,0:15:15.04:0,15,307	0/0:16,0:16:12.04:0,12,252	1/1:4,8:13:17.19:261,17,0	1/1:12,8:20:5.85:94,6,0	0/0:8,0:17:9.03:0,9,158	1/1:14,10:24:23.97:376,24,0	1/1:15,9:24:42.12:613,42,0	0/0:9,0:14:5.98:0,6,72	0/0:11,0:12:13.29:0,13,236	0/0:17,0:24:26.55:0,27,411	0/0:26,0:41:24.03:0,24,393	1/1:11,13:23:9.03:141,9,0	0/0:14,0:18:12.04:0,12,204	0/0:15,0:34:24.04:0,24,434	0/0:14,0:24:15.05:0,15,281	0/1:13,1:19:24.46:24,0,79	0/0:12,0:17:11.99:0,12,186	0/0:5,0:15:24.95:0,25,122
chr10	37907408	.	CT	C	57.72	PASS	AC=2;AF=0.111;AN=18;BaseQRankSum=1.495;DP=350;FS=0.000;HRun=1;HaplotypeScore=29.8459;MQ=11.91;MQ0=303;MQRankSum=-1.068;QD=7.21;ReadPosRankSum=-1.434;VQSLOD=-0.0752;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/0:4,0:1:3.01:0,3,48	./.	./.	0/0:9,0:3:6.02:0,6,95	./.	./.	./.	./.	0/0:15,0:3:6.01:0,6,74	0/0:11,0:3:6.02:0,6,84	./.	./.	./.	./.	./.	./.	./.	./.	0/0:18,0:12:24.08:0,24,381	./.	0/0:13,0:6:6.02:0,6,95	1/1:0,8:6:11.83:136,12,0	./.	0/0:11,0:6:12.04:0,12,190	0/0:15,0:5:15.05:0,15,240	./.	./.
chr10	37909545	.	A	AC	744.37	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-2.013;DP=438;FS=3.007;HRun=4;HaplotypeScore=43.3657;InbreedingCoeff=0.6501;MQ=57.51;MQ0=39;MQRankSum=-0.432;QD=23.26;ReadPosRankSum=-2.301;VQSLOD=2.1510;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,30:29:63.17:839,63,0	0/0:7,0:7:15.04:0,15,170	0/0:14,0:9:21.01:0,21,203	0/0:24,0:20:48.08:0,48,511	0/0:7,0:7:9.02:0,9,102	0/0:18,0:16:33.01:0,33,357	0/0:14,0:12:36.10:0,36,408	0/0:16,0:15:39.11:0,39,442	0/0:17,0:15:33.09:0,33,374	0/0:14,0:10:30.09:0,30,339	0/0:5,0:5:12.03:0,12,136	0/0:12,0:12:33.05:0,33,360	0/0:15,0:14:42.12:0,42,476	0/0:13,0:12:33.09:0,33,374	0/0:9,0:7:18.05:0,18,204	0/0:17,0:16:42.12:0,42,476	0/0:27,0:26:69.20:0,69,782	0/0:30,0:29:75.21:0,75,851	0/0:12,0:10:27.08:0,27,306	0/0:5,0:5:12.03:0,12,136	0/0:48,0:47:99:0,132,1426	0/0:5,0:5:3:0,3,34	0/0:6,0:6:15.04:0,15,170	0/0:29,0:28:69.20:0,69,783	0/0:12,0:11:24.07:0,24,272	0/0:12,0:10:30.09:0,30,340	0/0:15,0:12:33.06:0,33,360	0/0:3,0:1:3.01:0,3,34
chr10	37914698	.	CTT	C	1457.95	PASS	AB=0.948;AC=17;AF=0.304;AN=56;BaseQRankSum=3.676;DP=599;FS=5.873;HRun=14;HaplotypeScore=87.4466;InbreedingCoeff=0.3445;MQ=67.46;MQ0=14;MQRankSum=2.140;QD=6.10;ReadPosRankSum=5.629;VQSLOD=0.1550;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,26:28:23.97:221,24,0	0/0:7,0:7:9.86:0,10,84	0/0:66,0:24:35.13:0,35,277	0/0:60,0:19:12.46:0,12,143	0/1:18,0:17:45.17:80,0,45	0/0:17,0:18:45.07:0,45,522	0/0:14,0:17:36:0,36,401	0/0:23,0:24:35.55:0,36,385	0/1:18,1:19:15.50:88,0,15	0/0:20,0:19:37.77:0,38,386	0/0:16,0:16:29.70:0,30,342	0/1:6,5:10:4.52:96,0,5	0/1:12,0:12:29.78:100,0,30	0/1:15,1:16:35.09:86,0,35	0/0:13,0:13:24.05:0,24,277	0/1:14,0:14:5.01:52,0,5	0/1:42,2:44:99:196,0,147	0/0:26,0:26:55.28:0,55,618	0/0:20,0:18:33.07:0,33,404	0/0:15,0:15:33.80:0,34,338	0/0:15,0:18:26.52:0,27,302	1/1:12,0:13:24.14:163,24,0	1/1:6,8:14:35.87:302,36,0	1/1:5,10:15:23.34:239,23,0	0/0:15,0:16:29.71:0,30,277	0/1:26,0:23:9.05:9,0,137	0/0:21,0:20:38.33:0,38,351	0/1:6,0:5:0.06:7,0,0
chr10	37914713	.	CT	C	406.76	PASS	AB=0.962;AC=9;AF=0.161;AN=56;BaseQRankSum=1.238;DP=547;FS=8.304;HRun=14;HaplotypeScore=77.9371;InbreedingCoeff=0.2619;MQ=58.33;MQ0=16;MQRankSum=1.986;QD=3.06;ReadPosRankSum=2.800;VQSLOD=-0.1479;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:32:35.49:0,35,330	0/0:6,0:6:5.96:0,6,51	0/0:51,0:15:2.51:0,3,8	0/0:44,1:11:4.55:0,5,30	0/0:16,0:15:3.17:0,3,52	0/0:16,1:17:8.23:0,8,249	0/0:16,0:16:39.02:0,39,383	0/0:11,0:11:12.43:0,12,103	0/0:18,0:19:21.60:0,22,146	0/1:17,1:18:26.02:26,0,173	0/0:15,0:15:23.78:0,24,213	0/0:8,0:8:18.03:0,18,175	0/0:13,0:15:13.34:0,13,66	0/0:13,0:12:7.30:0,7,45	0/0:10,0:10:17.88:0,18,155	0/0:12,0:14:9.28:0,9,100	0/0:49,0:49:58.83:0,59,378	0/1:31,1:30:6.83:7,0,324	0/0:17,0:16:14.80:0,15,191	0/0:12,0:11:24.59:0,25,190	0/1:12,1:14:18.96:19,0,209	0/0:10,0:9:6.01:0,6,27	1/1:7,9:16:20.79:164,21,0	1/1:10,10:18:38.86:310,39,0	0/0:15,0:15:20.97:0,21,196	0/1:22,0:18:21.07:21,0,44	0/0:17,0:17:27.05:0,27,271	0/1:10,0:8:1.44:1,0,28
chr10	37915389	.	C	CGTGTGTGTGTGTATGTGT	8429.58	PASS	AB=1.000;AC=24;AF=0.429;AN=56;BaseQRankSum=6.698;DP=757;FS=19.017;HRun=0;HaplotypeScore=350.4358;InbreedingCoeff=0.5063;MQ=54.55;MQ0=8;MQRankSum=-5.216;QD=19.51;ReadPosRankSum=-4.688;VQSLOD=1.6663;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:35:41.48:0,41,764	0/0:4,0:6:8.70:0,9,102	0/0:19,0:12:35.84:0,36,464	0/0:35,0:19:37.25:0,37,763	1/1:26,0:26:23.45:343,23,0	0/0:22,0:22:9.40:0,9,491	0/1:24,0:24:80.27:80,0,650	0/0:24,0:24:7.40:0,7,1108	1/1:36,0:36:43.50:445,43,0	0/1:29,0:28:99:233,0,513	0/1:21,0:21:99:99,0,371	0/0:28,0:28:78.19:0,78,2472	1/1:24,0:24:60.06:998,60,0	1/1:24,0:23:32.81:518,33,0	0/0:25,0:23:37.65:0,38,672	1/1:34,1:34:47.06:750,47,0	1/1:31,0:31:66.84:1484,67,0	0/0:15,0:15:23.56:0,24,384	0/1:21,0:21:94.15:94,0,609	0/1:20,0:19:72.07:72,0,236	0/1:59,0:58:99:160,0,1715	1/1:36,0:36:36.29:502,36,0	0/0:28,0:27:66.02:0,66,1825	0/0:47,0:47:99:0,123,4274	0/0:24,0:24:1.22:0,1,607	1/1:3,17:36:66.45:2186,66,0	0/0:16,0:16:34.33:0,34,536	1/1:8,0:8:24.02:464,24,0
chr10	37915390	.	ATG	A	1272.32	PASS	AB=1.000;AC=8;AF=0.148;AN=54;BaseQRankSum=-3.935;DP=807;FS=1.380;HRun=0;HaplotypeScore=173.5365;InbreedingCoeff=0.4561;MQ=53.16;MQ0=10;MQRankSum=3.280;QD=7.90;ReadPosRankSum=5.751;VQSLOD=3.0635;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:49:0:0,0,0	0/0:6,0:6:3:0,3,26	./.	0/0:37,0:20:5.93:0,6,61	0/0:26,0:26:5.51:0,6,37	0/0:15,0:26:6:0,6,66	0/0:25,0:24:14.55:0,15,111	0/0:26,0:26:20.87:0,21,187	0/0:38,0:38:13.64:0,14,117	0/0:31,0:30:41.58:0,42,383	0/0:21,0:21:16.23:0,16,135	1/1:15,12:28:5.62:377,6,0	0/1:25,0:25:12.56:13,0,66	0/0:25,0:24:3.46:0,3,25	0/0:20,0:29:9.02:0,9,113	0/0:35,0:34:7.66:0,8,74	0/0:32,0:31:6.32:0,6,107	0/0:9,0:18:6.01:0,6,67	0/0:16,0:26:32:0,32,238	0/0:22,0:21:11.93:0,12,124	0/0:61,0:60:47.87:0,48,419	0/0:36,0:36:7.03:0,7,39	1/1:18,9:27:23.90:247,24,0	1/1:19,27:47:32.76:767,33,0	0/0:26,0:26:8.75:0,9,104	0/1:33,0:32:5.93:6,0,111	0/0:11,0:20:15.02:0,15,155	0/0:9,0:9:12.03:0,12,129
chr10	37916081	.	GTA	G	7120.33	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=13.663;DP=697;FS=18.141;HRun=0;HaplotypeScore=91.1703;InbreedingCoeff=0.9997;MQ=98.54;MQ0=1;MQRankSum=-4.038;QD=34.07;ReadPosRankSum=3.743;VQSLOD=5.4464;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,102,1714	0/0:13,0:13:36.12:0,36,636	0/0:36,0:36:90.27:0,90,1423	0/0:36,0:36:96.75:0,97,1616	1/1:1,13:14:30.10:412,30,0	0/0:15,0:15:45.15:0,45,792	0/0:25,0:25:72.22:0,72,1213	0/0:41,0:41:99:0,105,1861	1/1:2,18:20:54.18:742,54,0	0/0:30,0:30:87.30:0,87,1525	0/0:15,0:15:42.13:0,42,715	0/0:27,0:27:75.23:0,75,1273	1/1:1,23:23:57.19:783,57,0	1/1:2,30:32:81.27:1107,81,0	0/0:31,0:31:84.29:0,84,1479	1/1:4,23:27:63.21:866,63,0	1/1:2,24:26:69.23:948,69,0	0/0:11,0:11:33.11:0,33,585	0/0:16,0:16:39.12:0,39,663	0/0:21,0:21:57.18:0,57,983	0/0:46,0:46:99:0,126,2200	1/1:4,26:30:75.25:1028,75,0	0/0:27,0:27:75.24:0,75,1298	0/0:21,0:21:51.17:0,51,898	0/0:19,0:19:48.16:0,48,842	1/1:3,21:24:63.21:865,63,0	0/0:22,0:22:57.20:0,57,1005	1/1:0,12:12:27.09:371,27,0
chr10	37916255	.	CATTTT	C	1889.19	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.768;DP=655;FS=0.000;HRun=0;HaplotypeScore=127.3676;InbreedingCoeff=0.9665;MQ=85.81;MQ0=0;MQRankSum=-6.289;QD=44.98;ReadPosRankSum=-1.295;VQSLOD=3.1543;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,42:42:93.32:1984,93,0	0/0:7,0:7:21.07:0,21,657	0/0:22,0:23:63.20:0,63,1879	0/0:22,0:22:60.21:0,60,1703	0/0:31,0:31:90.31:0,90,2823	0/0:17,0:17:51.18:0,51,1627	0/0:19,0:19:57.20:0,57,1842	0/0:28,0:28:81.28:0,81,2620	0/0:20,0:20:57.20:0,57,1841	0/0:21,0:21:63.22:0,63,2031	0/0:22,0:22:66.23:0,66,2138	0/0:19,0:19:57.20:0,57,1798	0/0:23,0:23:69.24:0,69,2158	0/0:22,0:22:66.23:0,66,2134	0/0:25,0:25:75.26:0,75,2423	0/0:21,0:21:63.20:0,63,1919	0/0:25,0:25:75.26:0,75,2426	0/0:15,0:15:42.14:0,42,1351	0/0:25,0:25:75.26:0,75,2380	0/0:24,0:24:72.25:0,72,2329	0/0:46,0:46:99:0,138,4317	0/0:24,0:24:69.24:0,69,2229	0/0:26,0:26:78.27:0,78,2521	0/0:26,0:26:78.27:0,78,2520	0/0:22,0:22:66.23:0,66,2056	0/0:29,0:29:84.29:0,84,2631	0/0:27,0:27:81.28:0,81,2576	0/0:4,0:4:12.04:0,12,388
chr10	37916623	.	A	AT	6929.19	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=19.544;DP=755;FS=7.701;HRun=7;HaplotypeScore=118.8016;InbreedingCoeff=0.9998;MQ=86.12;MQ0=0;MQRankSum=-2.134;QD=30.93;ReadPosRankSum=2.272;VQSLOD=3.3648;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,138,1323	0/0:12,0:12:27.04:0,27,261	0/0:30,0:30:57.01:0,57,525	0/0:24,0:24:46.88:0,47,437	1/1:4,23:27:64.40:747,64,0	0/0:22,0:22:60.09:0,60,579	0/0:22,0:22:63.06:0,63,595	0/0:29,0:29:63.07:0,63,602	1/1:4,28:33:84.25:1005,84,0	0/0:27,0:27:66.10:0,66,637	0/0:22,0:22:63.10:0,63,608	0/0:27,0:27:72.10:0,72,689	1/1:4,20:24:57.17:688,57,0	1/1:2,20:22:57.17:689,57,0	0/0:30,0:30:84.13:0,84,811	1/1:0,25:25:66.20:797,66,0	1/1:0,31:30:87.27:1051,87,0	0/0:26,0:26:75.12:0,75,724	0/0:25,0:25:72.11:0,72,692	0/0:38,0:38:99:0,99,943	0/0:44,0:44:99:0,114,1090	1/1:0,16:16:48.15:577,48,0	0/0:20,0:20:51.07:0,51,487	0/0:34,0:34:92.91:0,93,863	0/0:20,0:20:54.08:0,54,521	1/1:4,20:24:57.17:685,57,0	0/0:29,0:28:78.12:0,78,748	1/1:0,22:22:57.17:689,57,0
chr10	37916989	.	GC	G	8982	PASS	AB=0.889;AC=35;AF=0.625;AN=56;BaseQRankSum=-7.880;DP=499;FS=10.487;HRun=8;HaplotypeScore=65.9873;InbreedingCoeff=0.7827;MQ=87.29;MQ0=0;MQRankSum=-4.338;QD=23.64;ReadPosRankSum=5.747;VQSLOD=4.7452;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,35:41:87.13:840,87,0	1/1:0,12:12:33.05:319,33,0	0/0:17,0:17:0.36:0,0,158	0/0:19,0:20:29.80:0,30,374	0/0:3,0:8:5.59:0,6,35	1/1:5,20:25:57.08:550,57,0	1/1:3,29:32:84.13:811,84,0	1/1:6,17:23:51.06:487,51,0	0/0:9,0:9:10.49:0,10,79	1/1:1,21:22:60.10:579,60,0	1/1:0,11:11:33.05:319,33,0	1/1:2,20:22:60.09:579,60,0	0/0:8,0:8:15.34:0,15,92	0/1:3,1:8:8.59:23,0,9	1/1:0,21:21:63.10:608,63,0	0/0:2,0:14:8.23:0,8,44	0/0:21,0:23:28.78:0,29,181	1/1:1,27:28:81.13:782,81,0	1/1:2,8:10:20.86:188,21,0	1/1:2,16:18:45.06:435,45,0	1/1:2,22:24:57.09:550,57,0	0/0:5,0:8:2.77:0,3,33	1/1:1,6:7:15.02:145,15,0	1/1:2,35:37:99:956,99,0	1/1:5,18:23:45.06:435,45,0	0/0:10,0:10:5.95:0,6,43	1/1:2,14:16:39.06:376,39,0	0/0:2,0:2:2.99:0,3,24
chr10	37917465	.	GAACA	G	6678.16	PASS	AB=0.992;AC=19;AF=0.339;AN=56;BaseQRankSum=-7.736;DP=691;FS=51.701;HRun=0;HaplotypeScore=162.6354;InbreedingCoeff=0.5935;MQ=75.14;MQ0=0;MQRankSum=-0.794;QD=22.71;ReadPosRankSum=-2.018;VQSLOD=2.6531;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:32,0:32:99:338,0,439	0/0:15,0:15:24.24:0,24,584	0/0:27,0:27:77.07:0,77,1315	0/0:21,0:21:38.49:0,38,814	1/1:1,24:25:69.21:1020,69,0	0/0:24,0:24:54.06:0,54,933	0/0:26,0:26:36.66:0,37,747	0/0:32,0:32:42.46:0,42,765	1/1:2,23:25:33.11:618,33,0	0/0:30,0:30:8.56:0,9,1111	0/0:21,0:21:39.39:0,39,845	0/0:32,0:32:41.36:0,41,1109	1/1:1,24:25:36.12:697,36,0	1/1:0,25:25:60.21:1160,60,0	0/1:22,0:22:20.05:20,0,699	1/1:0,22:22:39.13:755,39,0	1/1:0,18:18:33.11:638,33,0	0/0:27,0:27:58.98:0,59,981	0/1:13,0:13:7.96:8,0,272	0/0:20,0:20:8.07:0,8,548	0/0:22,0:22:58.51:0,59,1035	1/1:1,24:25:53.52:780,54,0	0/0:24,0:24:57.25:0,57,988	0/0:12,0:12:27.12:0,27,503	0/0:31,0:31:29.89:0,30,1171	0/1:38,0:38:99:453,0,398	0/0:33,0:33:74.01:0,74,1136	0/1:23,1:24:99:190,0,345
chr10	37917468	.	CAAAT	C	4824.25	PASS	AB=0.994;AC=31;AF=0.554;AN=56;BaseQRankSum=-4.512;DP=687;FS=0.000;HRun=0;HaplotypeScore=169.0651;InbreedingCoeff=-0.2337;MQ=73.80;MQ0=0;MQRankSum=-0.903;QD=8.20;ReadPosRankSum=-5.371;VQSLOD=2.0499;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:31,0:31:99:121,0,964	0/1:16,0:16:50.63:51,0,482	0/0:28,0:28:63.48:0,63,1031	0/0:20,0:20:43.16:0,43,569	1/1:24,0:24:67.78:571,68,0	0/1:24,0:24:42.56:43,0,809	0/1:25,0:25:99:193,0,590	0/1:35,0:35:99:164,0,679	1/1:23,1:24:33.10:414,33,0	0/1:26,2:28:82.02:82,0,994	0/1:22,0:22:64.28:64,0,716	0/1:30,0:30:47.19:47,0,1026	1/1:24,0:24:36.10:406,36,0	1/1:25,0:25:60.17:696,60,0	0/1:21,1:22:99:108,0,619	1/1:22,0:22:39.11:437,39,0	1/1:18,0:18:33.09:367,33,0	0/1:28,0:28:64.95:65,0,805	0/1:13,0:13:64.73:65,0,242	0/1:20,0:20:99:121,0,501	0/0:21,0:21:36.67:0,37,882	1/1:24,0:24:14.06:385,14,0	0/1:25,0:25:49.93:50,0,849	0/1:12,0:12:29.87:30,0,424	0/0:30,0:30:14.29:0,14,1128	0/1:39,0:39:99:154,0,1047	0/1:33,0:33:99:131,0,860	0/1:24,0:24:60.56:61,0,777
chr10	37917916	.	CG	C	9653.84	PASS	AB=0.521;AC=17;AF=0.304;AN=56;BaseQRankSum=12.263;DP=803;FS=10.021;HRun=1;HaplotypeScore=94.5167;InbreedingCoeff=0.9156;MQ=78.24;MQ0=1;MQRankSum=-1.597;QD=38.31;ReadPosRankSum=4.182;VQSLOD=4.7364;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,126,1988	0/0:17,0:17:51.17:0,51,814	0/0:40,0:40:86.33:0,86,1766	0/0:36,0:36:99:0,102,1521	1/1:1,30:31:90.22:1233,90,0	0/0:28,0:28:84.29:0,84,1335	0/0:34,0:34:99:0,99,1580	0/0:27,0:27:81.25:0,81,1223	1/1:0,26:26:75.25:1049,75,0	0/0:29,0:29:87.29:0,87,1364	0/0:26,0:26:78.27:0,78,1239	0/0:27,0:27:78.27:0,78,1246	1/1:0,29:29:87.29:1214,87,0	1/1:0,23:22:60.20:839,60,0	0/0:41,0:41:99:0,123,1895	1/1:0,27:27:78.26:1090,78,0	1/1:0,29:28:81.27:1133,81,0	0/0:14,0:14:42.14:0,42,670	0/0:22,0:22:63.20:0,63,984	0/0:19,0:19:57.17:0,57,880	0/0:32,0:32:93.32:0,93,1478	1/1:0,31:31:87.29:1217,87,0	0/0:38,0:38:99:0,114,1820	0/0:20,0:20:60.16:0,60,931	0/0:25,0:25:75.26:0,75,1198	0/1:3,35:38:28.52:1291,0,29	0/0:33,0:33:96.29:0,96,1480	1/1:0,18:18:42.14:587,42,0
chr10	37918854	.	T	TC	8540.28	PASS	AB=0.857;AC=27;AF=0.482;AN=56;BaseQRankSum=-15.529;DP=593;FS=3.213;HRun=2;HaplotypeScore=70.4232;InbreedingCoeff=0.9446;MQ=61.18;MQ0=3;MQRankSum=-0.133;QD=30.39;ReadPosRankSum=-1.039;VQSLOD=4.1694;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,123,1414	1/1:0,9:9:20.75:285,21,0	0/1:5,0:4:3.14:3,0,53	0/0:11,0:11:28.60:0,29,285	0/0:28,0:28:81.12:0,81,945	1/1:3,17:20:38.16:494,38,0	1/1:1,19:20:45.15:611,45,0	1/1:4,29:33:83.51:978,84,0	0/0:17,1:18:10.09:0,10,512	1/1:2,22:24:66.17:834,66,0	1/1:0,15:15:38.87:439,39,0	0/0:20,0:20:57.15:0,57,672	0/0:20,0:20:42.20:0,42,551	0/0:25,0:25:55.99:0,56,704	1/1:1,19:20:42.14:570,42,0	0/0:17,0:16:45.11:0,45,522	0/0:30,0:29:87.21:0,87,1016	1/1:1,25:26:54.08:918,54,0	1/1:2,16:18:49.31:596,49,0	1/1:1,23:24:54.01:668,54,0	1/1:1,18:19:51.16:679,51,0	0/0:26,0:25:66.20:0,66,801	0/0:20,0:20:56.82:0,57,643	0/0:11,0:11:33.09:0,33,392	1/1:1,25:26:60.20:814,60,0	0/0:27,1:28:40.40:0,40,864	1/1:1,19:20:48.16:651,48,0	0/0:15,0:15:33.07:0,33,390
chr10	37918901	.	GT	G	6269.55	PASS	AB=0.962;AC=21;AF=0.375;AN=56;BaseQRankSum=4.769;DP=612;FS=0.330;HRun=3;HaplotypeScore=74.1171;InbreedingCoeff=0.8286;MQ=63.01;MQ0=8;MQRankSum=-1.645;QD=24.88;ReadPosRankSum=4.447;VQSLOD=3.9719;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,135,1902	0/0:11,0:11:33.06:0,33,436	0/1:24,1:14:2.65:3,0,362	0/1:17,0:11:3.36:3,0,270	1/1:0,24:24:69.22:854,69,0	0/0:23,0:23:57.19:0,57,820	0/0:20,0:20:51.17:0,51,734	0/0:19,0:19:51.13:0,51,711	1/1:0,14:14:39.12:483,39,0	0/0:33,0:33:96.31:0,96,1355	0/0:16,0:16:45.15:0,45,647	0/0:23,0:23:66.21:0,66,932	1/1:1,20:21:57.01:706,57,0	1/1:1,22:23:60.19:744,60,0	0/0:24,0:24:57.15:0,57,798	1/1:0,17:17:51.16:632,51,0	1/1:0,24:24:72.23:892,72,0	0/1:23,2:25:8.18:8,0,777	0/0:25,0:24:69.20:0,69,970	0/0:17,0:17:51.16:0,51,716	0/0:19,0:19:54.18:0,54,776	1/1:0,28:28:75.24:928,75,0	0/0:19,0:19:57.19:0,57,820	0/0:15,0:15:45.06:0,45,596	0/0:22,0:22:54.18:0,54,776	1/1:2,20:22:19.99:682,20,0	0/0:26,0:26:69.23:0,69,993	1/1:0,12:12:27.08:335,27,0
chr10	37919426	.	GGAGCTTCTTCTCTGC	G	9656.49	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=2.991;DP=368;FS=12.875;HRun=0;HaplotypeScore=172.6350;InbreedingCoeff=0.9359;MQ=80.20;MQ0=0;MQRankSum=-11.011;QD=58.52;ReadPosRankSum=0.246;VQSLOD=3.7913;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:81.25:0,81,5340	1/1:0,4:4:6.02:269,6,0	0/0:12,0:13:33.07:0,33,1387	0/0:10,0:10:28.86:0,29,840	0/0:7,0:7:21.07:0,21,952	1/1:1,15:16:27.09:1151,27,0	1/1:3,17:20:36.12:1606,36,0	1/1:9,13:22:39.05:1207,39,0	0/0:16,0:16:48.16:0,48,3206	1/1:2,5:7:15.02:554,15,0	1/1:0,6:6:6.02:270,6,0	0/0:9,0:9:27.09:0,27,2026	0/0:15,0:15:45.11:0,45,2769	0/0:18,0:18:51.18:0,51,3807	1/1:4,8:12:21.07:944,21,0	0/0:11,0:11:33.11:0,33,2389	0/0:38,0:38:99:0,114,7570	1/1:6,15:21:18.02:695,18,0	1/1:4,17:21:44.83:802,45,0	1/1:2,5:7:15:540,15,0	1/1:2,11:13:6.02:269,6,0	0/0:4,0:4:12.04:0,12,611	0/0:8,0:8:24.08:0,24,1698	0/0:12,0:12:36.12:0,36,2651	1/1:2,9:11:18.06:809,18,0	0/0:11,0:11:33.11:0,33,2456	1/1:0,5:5:12.51:540,13,0	0/0:4,0:4:12.04:0,12,865
chr10	37919794	.	T	TGTGGG	4182.06	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=3.586;DP=468;FS=4.269;HRun=0;HaplotypeScore=150.7324;InbreedingCoeff=0.6294;MQ=74.57;MQ0=1;MQRankSum=-5.700;QD=17.95;ReadPosRankSum=-6.580;VQSLOD=1.5152;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:29:76.48:109,0,76	0/0:6,0:6:12.03:0,12,139	0/0:19,0:18:51.14:0,51,928	0/0:22,0:20:55.90:0,56,901	1/1:4,0:6:9.01:92,9,0	0/0:15,0:15:10.28:0,10,296	0/0:24,0:24:27.24:0,27,681	0/0:15,0:15:11.01:0,11,314	1/1:12,3:15:36.04:678,36,0	0/0:9,0:9:24.04:0,24,239	0/1:2,0:2:0:0,0,0	0/0:19,0:20:11.22:0,11,535	1/1:5,5:15:24.94:591,25,0	1/1:10,5:17:39.05:771,39,0	0/0:23,0:23:19.26:0,19,625	1/1:3,1:5:10.28:232,10,0	1/1:16,2:24:54.04:1037,54,0	0/0:30,0:31:10.48:0,10,733	0/1:18,0:20:5.38:5,0,367	0/0:6,0:6:9.50:0,10,103	0/1:56,0:56:2.79:3,0,1398	1/1:7,0:7:8.81:58,9,0	0/0:4,0:4:9.02:0,9,94	0/0:34,0:35:80.27:0,80,1055	0/0:5,0:5:9.03:0,9,130	1/1:10,0:16:40.47:489,40,0	0/1:15,0:15:66.71:67,0,274	1/1:4,0:4:5.99:50,6,0
chr10	37919874	.	C	CTG	9870.12	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=2.326;DP=586;FS=1.922;HRun=0;HaplotypeScore=84.5391;InbreedingCoeff=0.9982;MQ=82.00;MQ0=0;MQRankSum=-3.748;QD=46.78;ReadPosRankSum=3.107;VQSLOD=6.2646;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,30:32:78.13:1418,78,0	0/0:9,0:9:27.09:0,27,397	0/0:14,0:14:30.10:0,30,428	0/0:21,0:21:57.16:0,57,773	1/1:1,18:20:45.15:837,45,0	0/0:19,0:19:57.19:0,57,839	0/0:22,0:22:60.18:0,60,844	0/0:33,0:33:93.30:0,93,1335	1/1:1,19:20:54.19:1010,54,0	0/0:8,0:8:24.08:0,24,353	0/0:12,0:12:33.11:0,33,486	0/0:23,0:23:63.20:0,63,910	1/1:0,22:22:66.23:1235,66,0	1/1:4,15:19:45.15:837,45,0	0/0:21,0:21:63.21:0,63,928	1/1:2,9:11:33.11:596,33,0	1/1:4,29:34:84.18:1474,84,0	0/0:29,0:29:81.27:0,81,1193	0/0:19,0:20:57.18:0,57,803	0/0:12,0:12:33.11:0,33,485	0/0:53,0:53:99:0,153,2190	1/1:3,10:14:27:504,27,0	0/0:13,0:13:30.08:0,30,405	0/0:27,0:27:75.23:0,75,1083	0/0:25,0:25:75.24:0,75,1067	1/1:4,19:23:19.03:1061,19,0	0/0:14,0:14:42.14:0,42,618	1/1:0,16:16:48.16:899,48,0
chr10	37920075	.	TG	T	870.34	PASS	AB=0.890;AC=14;AF=0.250;AN=56;BaseQRankSum=4.073;DP=267;FS=14.208;HRun=10;HaplotypeScore=38.3326;InbreedingCoeff=0.1682;MQ=71.68;MQ0=0;MQRankSum=2.219;QD=7.08;ReadPosRankSum=4.524;VQSLOD=0.1283;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:8.55:0,9,45	0/0:5,0:5:6.02:0,6,66	0/0:4,0:3:0:0,0,0	0/0:6,0:5:0:0,0,0	0/1:8,2:10:14.02:14,0,88	0/0:3,0:3:6.02:0,6,66	0/1:17,2:19:7.09:7,0,342	0/0:6,0:6:3.01:0,3,33	0/0:15,0:15:39.10:0,39,423	0/0:7,0:7:12.03:0,12,133	0/0:4,0:4:6.02:0,6,66	1/1:3,9:12:23.99:208,24,0	0/1:2,1:3:17.02:17,0,55	0/1:10,1:11:11.38:11,0,73	0/0:6,0:6:6.02:0,6,66	0/1:10,1:11:8.13:8,0,164	0/0:14,0:14:38.65:0,39,372	0/0:12,1:13:10.01:0,10,317	0/0:10,0:10:21.06:0,21,230	0/0:3,0:3:4.83:0,5,38	0/0:27,1:28:27.81:0,28,474	0/1:3,1:4:20.04:20,0,27	1/1:2,9:11:17.99:156,18,0	1/1:1,24:25:65.99:573,66,0	0/1:8,0:8:7.31:7,0,133	0/0:6,0:6:2.84:0,3,14	0/1:9,0:9:1.99:2,0,197	0/0:4,0:4:5.68:0,6,27
chr10	37920076	.	G	GGGA	259.18	PASS	AB=0.825;AC=6;AF=0.107;AN=56;BaseQRankSum=1.265;DP=269;FS=0.000;HRun=0;HaplotypeScore=58.4708;InbreedingCoeff=0.5186;MQ=71.64;MQ0=0;MQRankSum=-0.939;QD=9.60;ReadPosRankSum=-1.293;VQSLOD=2.6334;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:6,6:13:10.75:106,0,11	0/0:5,0:5:12:0,12,149	0/1:4,0:3:0.01:0,0,0	0/0:6,0:5:5.93:0,6,40	0/0:10,0:10:15.04:0,15,207	0/0:3,0:3:9.02:0,9,129	0/0:20,0:20:51.06:0,51,626	0/0:7,0:7:9.01:0,9,103	0/0:15,0:15:39.12:0,39,605	0/0:7,0:7:15.04:0,15,232	0/0:4,0:4:6.02:0,6,101	0/0:11,0:11:27.06:0,27,272	0/0:3,0:3:9.02:0,9,112	0/0:11,0:11:14.66:0,15,136	0/0:6,0:6:6.02:0,6,101	0/0:10,0:10:20.89:0,21,322	0/0:14,0:14:38.66:0,39,460	0/0:13,0:13:39.07:0,39,539	0/0:9,0:9:24.07:0,24,381	0/0:3,0:3:7.83:0,8,82	0/0:28,0:28:62.69:0,63,800	0/0:5,0:5:6.02:0,6,82	0/0:11,0:11:21.04:0,21,209	0/0:24,0:24:66.09:0,66,663	0/0:7,0:7:4.26:0,4,209	1/1:0,6:6:11.21:118,11,0	0/0:10,0:10:24.06:0,24,340	1/1:2,2:4:9.02:151,9,0
chr10	37920200	.	T	TTTTG	3173.16	PASS	AB=0.630;AC=9;AF=0.161;AN=56;BaseQRankSum=-7.506;DP=576;FS=5.304;HRun=0;HaplotypeScore=100.1118;InbreedingCoeff=0.8515;MQ=76.91;MQ0=5;MQRankSum=-1.629;QD=34.87;ReadPosRankSum=1.095;VQSLOD=3.6888;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:35.85:0,36,713	0/0:12,0:12:15.03:0,15,220	0/0:37,0:30:12.50:0,13,260	0/0:40,0:33:26.28:0,26,474	0/0:17,0:17:38.99:0,39,514	0/0:13,0:13:33.08:0,33,500	0/0:20,0:20:39.09:0,39,602	0/0:28,0:28:45.13:0,45,665	0/0:27,0:27:63.21:0,63,1020	0/0:16,0:16:33.11:0,33,520	0/0:8,0:8:15.05:0,15,246	1/1:6,15:22:33.11:789,33,0	0/0:14,0:14:33.11:0,33,541	0/0:18,0:18:39.12:0,39,604	0/0:14,0:14:24.08:0,24,381	0/0:15,0:15:36.08:0,36,523	0/0:29,0:29:69.16:0,69,1004	0/0:24,0:24:63.21:0,63,1021	0/0:19,0:18:30.09:0,30,421	0/0:18,0:18:45.15:0,45,725	0/0:37,0:37:75.25:0,75,1205	0/0:17,0:17:39.13:0,39,636	1/1:4,16:20:36.12:856,36,0	1/1:5,13:19:30.10:731,30,0	0/0:17,0:17:36.12:0,36,554	0/1:7,8:16:49.60:449,0,50	0/0:24,0:24:57.18:0,57,910	1/1:4,9:13:21.07:512,21,0
chr10	37920416	.	AGTGTGTGTGTGTGTGT	A	14203.76	PASS	AB=0.882;AC=39;AF=0.722;AN=54;BaseQRankSum=8.176;DP=685;FS=0.582;HRun=0;HaplotypeScore=267.1464;InbreedingCoeff=0.6940;MQ=55.54;MQ0=2;MQRankSum=-7.384;QD=28.81;ReadPosRankSum=1.408;VQSLOD=3.4493;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:30:6.45:0,6,175	1/1:6,8:14:23.82:864,24,0	./.	0/0:20,0:15:3.01:0,3,44	1/1:8,10:18:12.49:433,12,0	1/1:13,7:21:14.78:638,15,0	1/1:16,11:27:12.51:528,13,0	1/1:32,0:31:6.01:67,6,0	1/1:14,19:33:33.78:1580,34,0	1/1:11,7:18:7.56:163,8,0	1/1:7,4:12:9.03:373,9,0	0/0:34,0:36:39.61:0,40,2136	1/1:10,8:20:24.08:1016,24,0	1/1:15,15:30:13.17:1300,13,0	1/1:7,14:21:36.08:1472,36,0	1/1:13,13:26:29.71:1320,30,0	1/1:16,22:37:12.04:418,12,0	1/1:13,8:21:6.02:264,6,0	0/1:13,0:15:22.93:105,0,23	1/1:9,11:20:17.98:494,18,0	1/1:36,14:49:2.37:101,2,0	1/1:9,14:23:27.09:1167,27,0	0/0:16,0:19:21.07:0,21,1184	0/0:24,0:37:51.16:0,51,2963	1/1:10,12:24:21.54:865,22,0	0/0:17,0:28:1.62:0,2,1925	1/1:15,14:30:23.79:1035,24,0	0/0:4,0:12:9.03:0,9,397
chr10	37921422	.	C	CGTGTGT	3069.27	PASS	AB=1.000;AC=39;AF=0.780;AN=50;BaseQRankSum=-5.632;DP=614;FS=0.000;HRun=0;HaplotypeScore=143.4902;InbreedingCoeff=0.5255;MQ=61.79;MQ0=10;MQRankSum=2.389;QD=6.69;ReadPosRankSum=-2.736;VQSLOD=2.0390;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:36:0.53:262,1,0	1/1:5,0:14:9.03:136,9,0	./.	0/1:23,0:11:0:0,0,0	1/1:13,10:26:3.01:39,3,0	1/1:12,10:32:4.12:132,4,0	1/1:17,11:31:3.01:39,3,0	1/1:29,0:29:14.96:180,15,0	1/1:10,9:20:3.01:85,3,0	1/1:26,0:26:25.71:421,26,0	./.	0/0:8,0:26:26.11:0,26,340	1/1:8,1:18:8.06:181,8,0	1/1:9,7:18:3.01:97,3,0	1/1:7,0:20:3.01:37,3,0	1/1:8,7:17:6.49:194,6,0	1/1:10,7:23:11.68:259,12,0	1/1:13,0:22:4.25:114,4,0	1/1:16,0:15:8.97:72,9,0	1/1:26,0:24:27.02:351,27,0	1/1:28,0:28:26.95:294,27,0	1/1:14,0:14:11.58:185,12,0	0/0:15,0:25:8.77:0,9,162	0/0:7,0:19:5.15:0,5,80	1/1:8,9:18:6.02:135,6,0	0/0:18,0:24:8.86:0,9,126	./.	0/0:4,0:3:3.01:0,3,35
chr10	37922189	.	C	CA	785.60	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-6.528;DP=599;FS=6.458;HRun=7;HaplotypeScore=61.5104;InbreedingCoeff=0.9406;MQ=66.80;MQ0=1;MQRankSum=-2.780;QD=26.19;ReadPosRankSum=0.253;VQSLOD=4.2501;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:96.15:0,96,927	0/0:7,0:7:18.03:0,18,174	0/0:16,0:15:6.29:0,6,226	0/0:21,0:19:44.54:0,45,405	0/0:16,0:16:45.07:0,45,434	0/0:21,0:21:54.08:0,54,521	0/0:24,0:24:59.96:0,60,565	0/0:20,0:20:48.07:0,48,463	0/0:22,0:22:60.09:0,60,579	0/0:18,0:18:45.06:0,45,434	0/0:13,0:13:39.06:0,39,377	0/0:20,0:20:60.10:0,60,579	0/0:13,0:13:27.04:0,27,261	0/0:17,0:17:51.06:0,51,485	0/0:22,0:22:60.09:0,60,579	0/0:31,0:31:87.14:0,87,840	0/0:26,0:26:69.08:0,69,658	0/0:26,0:26:60:0,60,560	0/0:22,0:22:51.07:0,51,492	0/0:17,0:17:45.07:0,45,434	0/0:37,0:37:90.14:0,90,869	0/0:18,0:18:51.04:0,51,484	0/0:18,1:19:18.02:0,18,456	0/0:25,0:26:70.97:0,71,645	0/0:27,0:27:78.13:0,78,753	1/1:4,18:22:54.17:652,54,0	0/0:34,0:34:90.14:0,90,869	1/1:0,8:8:21.06:254,21,0
chr10	37922302	.	GTTGTTTTTTTTTTTTTTTTTTTTT	G	8985.51	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=7.759;DP=484;FS=1.735;HRun=0;HaplotypeScore=183.0146;InbreedingCoeff=0.8046;MQ=64.66;MQ0=48;MQRankSum=-1.241;QD=31.98;ReadPosRankSum=5.185;VQSLOD=3.4921;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:21:33.05:0,33,1435	1/1:2,1:3:9.02:260,9,0	0/0:53,0:15:15.16:0,15,507	0/0:68,0:23:56.36:0,56,1045	1/1:5,21:23:22.31:242,22,0	1/1:2,10:10:6.02:377,6,0	1/1:2,16:17:12.04:754,12,0	1/1:4,15:19:10.64:734,11,0	1/1:0,9:10:6.02:342,6,0	1/1:7,14:15:20.76:371,21,0	1/1:2,9:10:20.99:737,21,0	0/0:3,0:3:9.03:0,9,330	1/1:8,0:8:23.57:261,24,0	1/1:6,1:7:15.04:444,15,0	1/1:0,6:6:3.01:188,3,0	1/1:3,4:5:3.01:187,3,0	1/1:2,21:23:5.23:196,5,0	1/1:3,15:18:9.03:417,9,0	1/1:9,15:21:51.43:1064,51,0	1/1:5,14:16:24.85:738,25,0	1/1:7,0:5:8.98:83,9,0	1/1:4,12:13:26.82:684,27,0	0/0:12,0:12:35.31:0,35,957	0/0:7,0:6:6.49:0,6,219	1/1:10,0:9:14.91:480,15,0	0/0:26,0:24:66.17:0,66,3114	1/1:3,10:13:6.77:426,7,0	0/0:12,0:9:24.04:0,24,1200
chr10	37922339	.	TGGTTC	T	236.02	PASS	AB=0.925;AC=7;AF=0.135;AN=52;BaseQRankSum=0.894;DP=557;FS=4.944;HRun=0;HaplotypeScore=94.6379;InbreedingCoeff=0.3874;MQ=32.78;MQ0=161;MQRankSum=-1.415;QD=2.31;ReadPosRankSum=-2.201;VQSLOD=1.3824;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:24:21.28:0,21,454	0/0:4,0:3:5.93:0,6,72	./.	0/0:11,0:3:4.56:0,5,32	0/0:28,0:20:24.08:0,24,416	0/0:13,0:10:17.82:0,18,257	0/0:28,0:26:49.68:0,50,640	0/0:24,0:17:27.08:0,27,451	0/0:15,0:10:5.70:0,6,222	0/0:21,0:12:17.89:0,18,311	0/0:17,0:11:20.34:0,20,234	1/1:7,6:6:8.52:119,9,0	0/0:11,0:4:9.03:0,9,142	0/0:10,0:6:14.61:0,15,174	0/1:12,0:5:3.71:4,0,91	0/0:15,0:9:19.77:0,20,326	0/0:56,0:33:41.42:0,41,671	0/0:32,0:23:32.74:0,33,542	0/0:24,0:17:35.99:0,36,553	0/0:26,0:16:25.77:0,26,311	0/0:13,0:6:5.64:0,6,108	0/0:12,0:11:16.84:0,17,215	1/1:5,6:7:8.98:128,9,0	./.	0/0:8,0:4:9.03:0,9,156	0/1:21,0:18:99:101,0,534	0/0:26,0:19:30.75:0,31,468	0/1:37,1:18:4.32:4,0,677
chr10	37923171	.	T	TGAGAGAGA	7784.18	PASS	AB=1.000;AC=49;AF=0.875;AN=56;BaseQRankSum=-1.812;DP=499;FS=2.415;HRun=0;HaplotypeScore=139.8084;InbreedingCoeff=0.4211;MQ=41.59;MQ0=15;MQRankSum=3.513;QD=16.53;ReadPosRankSum=-2.001;VQSLOD=3.8889;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:24:4.40:40,4,0	1/1:10,0:9:13.26:224,13,0	0/0:4,0:2:6.02:0,6,89	0/0:10,0:1:3.01:0,3,72	1/1:9,0:9:3:25,3,0	0/0:4,10:14:0:0,0,0	1/1:32,0:30:9.50:197,10,0	1/1:26,0:25:20.04:422,20,0	1/1:19,0:19:14.98:320,15,0	1/1:24,0:24:21.98:648,22,0	1/1:21,0:20:20.71:412,21,0	1/1:13,0:12:10.73:227,11,0	1/1:13,0:12:15.84:271,16,0	1/1:8,0:8:2.97:20,3,0	1/1:25,0:23:15.01:347,15,0	1/1:25,0:24:25.53:472,26,0	1/1:13,0:12:6.49:158,6,0	1/1:12,0:12:21.07:597,21,0	1/1:17,0:17:15.77:462,16,0	1/1:13,0:13:11.81:192,12,0	1/1:22,0:21:18.47:349,18,0	1/1:23,0:22:12.04:314,12,0	1/1:21,0:19:14.73:206,15,0	1/1:18,0:18:11.88:165,12,0	1/1:24,0:23:14.90:377,15,0	0/1:25,0:24:99:436,0,129	1/1:19,0:18:30.06:683,30,0	1/1:14,0:13:12.19:219,12,0
chr10	37923192	.	G	GAT	382.56	PASS	AB=0.844;AC=2;AF=0.036;AN=56;BaseQRankSum=3.411;DP=638;FS=0.816;HRun=0;HaplotypeScore=127.2408;InbreedingCoeff=-0.0521;MQ=55.68;MQ0=18;MQRankSum=1.130;QD=8.50;ReadPosRankSum=4.790;VQSLOD=3.3828;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:33:27.36:0,27,214	0/0:10,0:10:12.11:0,12,85	0/0:37,0:14:9.68:0,10,237	0/0:45,0:22:51.42:0,51,481	0/0:12,0:11:5.99:0,6,48	0/0:15,0:15:11.76:0,12,92	0/0:34,0:32:40.78:0,41,341	0/0:31,0:29:76.48:0,76,577	0/0:19,0:19:24.06:0,24,192	0/0:25,0:25:55.65:0,56,460	0/0:20,0:19:11.34:0,11,88	0/0:18,0:17:20.07:0,20,161	0/0:15,0:14:26.14:0,26,194	0/0:10,0:10:13.80:0,14,104	0/0:22,0:22:29.35:0,29,246	0/0:28,0:26:35.21:0,35,262	0/0:12,0:12:14.81:0,15,100	0/0:11,0:11:16.80:0,17,129	0/0:18,0:18:40.33:0,40,336	0/0:24,0:24:17.36:0,17,247	0/0:21,0:21:15.60:0,16,139	0/0:32,0:32:47.38:0,47,371	0/0:27,0:25:27.82:0,28,218	0/0:21,0:21:23.16:0,23,170	0/0:29,0:29:35.74:0,36,276	0/1:17,14:29:99:281,0,361	0/0:22,0:21:8.59:0,9,158	0/1:14,0:12:62.62:190,0,63
chr10	37924567	.	G	GTT	6415.16	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-1.853;DP=506;FS=6.136;HRun=10;HaplotypeScore=86.9106;InbreedingCoeff=0.8915;MQ=72.04;MQ0=5;MQRankSum=-0.900;QD=21.46;ReadPosRankSum=-3.567;VQSLOD=3.4554;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:32:57.12:0,57,227	1/1:1,10:11:15.05:208,15,0	0/0:62,0:27:14.83:0,15,111	0/0:38,0:12:8.56:0,9,65	1/1:13,11:24:49.86:662,50,0	1/1:3,18:22:39.12:554,39,0	1/1:4,7:12:11.53:178,12,0	1/1:8,13:20:36.04:442,36,0	1/1:3,7:11:17.80:223,18,0	1/1:3,12:15:30.18:359,30,0	1/1:4,15:20:41.45:524,41,0	0/0:11,0:11:11.83:0,12,172	1/1:2,6:8:9.03:134,9,0	1/1:12,1:12:23.86:272,24,0	1/1:1,11:12:18.06:268,18,0	1/1:4,5:8:3.01:46,3,0	1/1:5,20:26:42.46:559,42,0	1/1:2,14:17:29.58:382,30,0	1/1:7,15:24:46.43:526,46,0	1/1:3,11:15:30.05:385,30,0	1/1:1,3:4:6.02:89,6,0	1/1:3,0:3:6.02:87,6,0	0/0:10,0:10:15:0,15,150	0/0:12,0:12:17.41:0,17,179	1/1:2,9:12:21.04:283,21,0	0/0:27,0:28:66.08:0,66,705	1/1:3,13:17:17.55:233,18,0	0/0:11,0:8:23.99:0,24,226
chr10	37924578	.	GT	G	333.03	PASS	AB=1.000;AC=8;AF=0.143;AN=56;BaseQRankSum=-0.760;DP=471;FS=24.422;HRun=11;HaplotypeScore=97.6779;InbreedingCoeff=0.5603;MQ=60.67;MQ0=6;MQRankSum=-1.181;QD=4.27;ReadPosRankSum=0.879;VQSLOD=0.1656;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:32:16.21:47,0,16	0/0:10,0:10:3.10:0,3,57	0/0:50,0:14:21.02:0,21,150	0/0:41,0:11:5.12:0,5,32	0/0:21,0:21:52.28:0,52,307	0/0:23,0:23:30.10:0,30,194	0/0:9,0:9:13.33:0,13,58	0/0:18,0:17:22.91:0,23,169	0/0:8,0:9:14.84:0,15,89	0/0:15,0:15:22.84:0,23,91	0/0:19,0:19:39.42:0,39,202	1/1:2,9:11:14.54:123,15,0	0/0:6,0:6:11.71:0,12,79	0/0:10,0:9:10.30:0,10,74	0/0:12,0:12:21.68:0,22,101	0/0:10,0:9:8.78:0,9,54	0/0:25,0:24:46.50:0,47,281	0/0:18,0:18:22.25:0,22,138	0/0:22,0:18:29.09:0,29,133	0/1:15,0:15:15.89:16,0,70	0/0:3,0:3:8.45:0,8,42	0/0:3,0:3:5.81:0,6,33	1/1:1,7:8:14.91:115,15,0	1/1:4,7:11:23.77:180,24,0	0/0:12,0:12:9.05:0,9,80	0/0:30,0:30:78.60:0,79,787	0/0:15,0:15:19.44:0,19,88	0/0:11,0:8:24.06:0,24,256
chr10	37924585	.	T	TG	698.34	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=1.887;DP=465;FS=3.937;HRun=0;HaplotypeScore=91.4786;InbreedingCoeff=0.4256;MQ=58.35;MQ0=10;MQRankSum=-2.523;QD=8.12;ReadPosRankSum=1.761;VQSLOD=3.3496;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,28:29:65.18:774,65,0	0/0:6,0:6:14.91:0,15,164	0/1:54,0:15:30.10:30,0,168	0/0:40,0:11:6.95:0,7,59	0/0:22,0:22:30.23:0,30,229	0/0:22,0:22:50.95:0,51,655	0/0:6,0:6:15.05:0,15,202	0/0:21,0:19:54.67:0,55,569	0/0:8,0:8:2.17:0,2,50	0/0:14,0:14:35.16:0,35,406	0/0:19,0:19:47.99:0,48,549	0/0:10,0:10:14.69:0,15,98	0/0:8,0:8:15.71:0,16,116	0/0:8,0:7:8.15:0,8,56	0/0:13,0:13:27.07:0,27,344	0/0:10,0:9:9.78:0,10,67	0/0:26,0:23:33.33:0,33,201	0/0:18,0:18:35.97:0,36,413	0/0:20,0:15:41.75:0,42,501	0/0:15,0:15:28.88:0,29,288	0/0:3,0:3:9.03:0,9,122	0/0:2,0:2:5.83:0,6,32	0/0:7,0:7:14.86:0,15,104	0/0:10,0:10:26.71:0,27,184	0/0:14,0:14:23.58:0,24,300	0/0:30,0:30:88.49:0,88,1127	0/0:16,0:16:24.07:0,24,306	0/0:11,0:8:24.08:0,24,334
chr10	37925199	.	TTCCC	T	706.30	PASS	AB=0.956;AC=11;AF=0.220;AN=50;BaseQRankSum=3.430;DP=224;FS=0.000;HRun=0;HaplotypeScore=43.7142;InbreedingCoeff=0.4428;MQ=49.92;MQ0=9;MQRankSum=-1.645;QD=11.21;ReadPosRankSum=0.176;VQSLOD=2.2789;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,3:10:18.01:216,18,0	0/0:2,0:2:3.01:0,3,67	./.	./.	0/0:9,0:9:18.05:0,18,357	0/0:6,0:5:9.03:0,9,165	0/0:11,0:8:8.96:0,9,143	0/0:9,0:7:3.90:0,4,44	0/0:3,0:4:3.01:0,3,50	0/0:16,0:16:24.07:0,24,457	0/0:13,0:13:11.99:0,12,186	1/1:2,9:11:9.03:150,9,0	0/0:12,0:12:21:0,21,337	0/0:5,0:5:9.03:0,9,212	0/0:10,0:9:15.05:0,15,294	0/0:7,0:7:9.03:0,9,199	0/1:7,0:6:8.84:9,0,88	0/0:5,0:5:9.03:0,9,222	0/0:4,0:4:5.98:0,6,94	0/0:5,0:5:3.01:0,3,74	0/0:19,0:16:20.95:0,21,359	./.	1/1:6,3:9:18:241,18,0	0/1:11,1:12:0.94:207,0,1	0/0:5,0:5:2.94:0,3,18	0/0:6,0:6:12.04:0,12,296	0/1:9,0:9:16.55:17,0,218	1/1:3,0:3:2.84:14,3,0
chr10	37925232	.	CCTTTCTTTCTTTCTTT	C	2102.23	PASS	AB=0.933;AC=31;AF=0.705;AN=44;BaseQRankSum=2.633;DP=176;FS=13.636;HRun=0;HaplotypeScore=63.1626;InbreedingCoeff=0.0542;MQ=39.95;MQ0=13;MQRankSum=-2.301;QD=17.09;ReadPosRankSum=1.164;VQSLOD=0.4537;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:13,0:10:50.88:253,0,51	1/1:0,2:2:3.01:116,3,0	0/0:11,0:2:0.47:0,0,1	./.	1/1:5,1:5:2.98:22,3,0	0/1:4,4:5:99:106,0,217	0/0:4,1:4:6:0,6,120	1/1:6,0:5:5.47:93,5,0	1/1:1,4:5:2.88:15,3,0	1/1:9,0:8:9.02:279,9,0	1/1:4,0:3:3.01:38,3,0	1/1:10,0:10:9.92:280,10,0	1/1:3,6:8:6.01:200,6,0	1/1:3,0:2:3.01:40,3,0	./.	1/1:3,4:7:6.02:234,6,0	0/1:6,0:4:65.71:78,0,66	0/1:6,0:6:46.96:47,0,80	0/0:7,0:5:2.04:0,2,6	./.	1/1:7,0:7:1.25:57,1,0	./.	1/1:8,0:8:8.99:150,9,0	0/1:10,0:10:99:110,0,186	1/1:0,4:4:3.01:115,3,0	0/0:8,0:7:18.06:0,18,879	./.	./.
chr10	37925252	.	TCTTTCTTTCTTTCTTTCTTCCTTC	T	2529.75	PASS	AB=1.000;AC=27;AF=0.540;AN=50;BaseQRankSum=0.539;DP=205;FS=6.784;HRun=0;HaplotypeScore=101.2459;InbreedingCoeff=-0.0618;MQ=35.70;MQ0=18;MQRankSum=0.157;QD=16.43;ReadPosRankSum=2.366;VQSLOD=1.4256;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:14,0:11:99:216,0,157	0/1:4,0:4:16.41:154,0,16	0/0:5,0:1:0.89:0,1,2	./.	1/1:7,0:6:9:106,9,0	0/1:9,0:6:99:141,0,207	0/0:7,0:4:6:0,6,118	1/1:7,0:5:11.95:175,12,0	0/0:8,0:8:2.89:0,3,69	1/1:2,5:6:8.69:324,9,0	0/1:7,0:5:30.60:31,0,145	0/1:14,0:12:99:100,0,193	1/1:9,0:8:8.48:293,8,0	1/1:3,0:1:3.01:58,3,0	0/0:4,0:4:9.03:0,9,224	1/1:7,0:6:6.02:318,6,0	0/1:6,0:6:25.39:227,0,25	0/1:5,0:5:43.95:44,0,114	0/1:6,0:4:2.03:14,0,2	0/0:5,0:5:8.96:0,9,166	0/1:5,0:4:50.87:51,0,52	1/1:4,7:7:6.56:30,7,0	0/1:15,0:15:62.26:62,0,96	0/1:12,0:12:99:192,0,233	1/1:5,0:4:3.01:150,3,0	0/0:12,0:11:33.11:0,33,1440	./.	./.
chr10	37925253	.	CTTTCTTT	C	308.04	PASS	AB=0.960;AC=12;AF=0.240;AN=50;BaseQRankSum=6.037;DP=204;FS=3.502;HRun=0;HaplotypeScore=67.6925;InbreedingCoeff=-0.1784;MQ=35.06;MQ0=19;MQRankSum=-2.607;QD=3.14;ReadPosRankSum=5.021;VQSLOD=1.1742;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:13,1:11:70.43:70,0,256	0/1:4,0:4:16.06:16,0,85	0/0:4,0:1:0.89:0,1,2	./.	0/0:7,0:6:8.98:0,9,83	0/1:9,0:6:12.07:12,0,201	0/0:6,0:3:5.99:0,6,100	0/0:7,0:5:15.04:0,15,173	0/0:8,0:8:12.04:0,12,155	0/1:7,0:6:28.98:68,0,29	0/0:9,0:7:15.05:0,15,191	0/1:11,2:11:98.43:98,0,124	0/1:9,0:8:17.68:18,0,53	0/0:4,0:1:3.01:0,3,35	0/0:6,0:4:9.03:0,9,116	0/1:6,0:5:17.69:50,0,18	0/0:7,0:6:17.59:0,18,249	0/0:5,0:5:9.03:0,9,151	0/0:7,0:5:15.02:0,15,173	0/0:6,0:6:12.04:0,12,155	0/1:5,0:4:3.53:4,0,60	0/0:11,0:7:2.92:0,3,17	0/1:13,2:15:42.07:42,0,73	0/1:10,1:11:37.48:37,0,405	1/1:5,0:4:3:27,3,0	0/0:12,0:11:32.98:0,33,776	./.	./.
chr10	37925268	.	TCTTCCTTCCTTCCTTCCTTC	T	1924.24	PASS	AB=0.973;AC=13;AF=0.260;AN=50;BaseQRankSum=2.563;DP=226;FS=5.074;HRun=0;HaplotypeScore=118.1363;InbreedingCoeff=-0.3234;MQ=37.55;MQ0=19;MQRankSum=-3.749;QD=15.39;ReadPosRankSum=3.943;VQSLOD=1.9320;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:15,0:13:99:471,0,173	0/1:5,0:4:14.17:91,0,14	./.	./.	0/0:2,0:7:11.24:0,11,70	0/1:13,0:11:72.46:72,0,161	0/0:7,0:3:6.02:0,6,79	0/0:8,0:6:14.22:0,14,116	0/0:9,0:9:5.74:0,6,54	1/1:8,0:7:0.10:205,0,0	0/1:12,0:10:57.38:57,0,58	0/1:13,0:11:99:250,0,228	0/1:10,0:9:26.17:195,0,26	0/0:7,0:4:5.95:0,6,48	0/0:7,0:5:11.93:0,12,118	0/1:7,0:6:31.06:197,0,31	0/1:8,0:7:34.03:111,0,34	0/0:5,0:5:0.62:0,1,71	0/0:3,0:2:6.02:0,6,90	0/0:10,0:10:23.49:0,23,242	0/0:4,0:4:5.05:0,5,83	0/0:13,0:9:14.26:0,14,90	0/1:8,6:14:19.77:20,0,125	0/1:11,0:11:99:314,0,113	0/1:9,0:8:51.78:76,0,52	0/0:13,0:12:2.10:0,2,1214	./.	0/0:4,0:1:3.01:0,3,86
chr10	37925505	.	T	TGAGAGAGAGAGAGA	7172.87	PASS	AB=0.868;AC=40;AF=0.769;AN=52;BaseQRankSum=-5.035;DP=529;FS=5.711;HRun=0;HaplotypeScore=183.3885;InbreedingCoeff=0.6041;MQ=54.31;MQ0=9;MQRankSum=-2.440;QD=18.58;ReadPosRankSum=0.611;VQSLOD=3.5551;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:20:12.51:326,13,0	./.	0/0:31,0:15:3.01:0,3,82	0/0:39,0:18:4.53:0,5,25	1/1:16,0:15:6.02:128,6,0	1/1:19,0:22:12.93:596,13,0	1/1:25,0:22:11.77:496,12,0	1/1:29,0:29:35.33:965,35,0	1/1:17,0:17:9.03:164,9,0	1/1:13,0:13:12.04:353,12,0	1/1:22,0:22:5.65:141,6,0	1/1:22,1:24:6.02:308,6,0	1/1:21,0:20:17.89:532,18,0	0/0:19,1:21:0:0,0,0	./.	1/1:19,0:18:6.01:183,6,0	1/1:16,0:14:15.05:676,15,0	1/1:9,0:9:18.02:620,18,0	1/1:12,0:12:15.05:543,15,0	1/1:21,0:20:14.84:281,15,0	1/1:15,0:15:6:114,6,0	0/1:20,0:19:0:0,0,0	1/1:12,0:11:3.01:117,3,0	0/1:16,6:25:0.54:1,0,1	1/1:15,0:15:9.03:300,9,0	0/0:7,0:15:20.66:0,21,531	1/1:11,0:11:6.02:332,6,0	0/0:5,0:10:21.07:0,21,616
chr10	37925683	.	TTGTGTG	T	2326.82	PASS	AB=0.762;AC=33;AF=0.660;AN=50;BaseQRankSum=1.910;DP=552;FS=0.828;HRun=0;HaplotypeScore=134.4316;InbreedingCoeff=0.2846;MQ=60.03;MQ0=9;MQRankSum=-4.259;QD=6.57;ReadPosRankSum=0.418;VQSLOD=2.5215;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:21:3.01:0,3,97	1/1:2,1:3:3.01:61,3,0	./.	./.	1/1:16,0:25:5.78:11,6,0	1/1:6,6:14:21.07:390,21,0	1/1:15,8:23:15.01:254,15,0	./.	1/1:10,0:22:6.67:13,7,0	1/1:14,7:21:14.91:163,15,0	1/1:8,6:15:9.03:184,9,0	0/0:10,0:15:18.95:0,19,542	0/1:19,1:24:29.51:58,0,30	1/1:6,0:9:3.73:16,4,0	1/1:13,10:23:15.05:306,15,0	1/1:8,2:18:11.33:133,11,0	0/0:15,0:23:2.98:0,3,96	1/1:10,3:13:3.01:61,3,0	1/1:20,3:22:1.54:107,2,0	0/1:14,7:24:23.37:230,0,23	1/1:17,0:17:2.99:25,3,0	0/1:6,1:18:32.28:61,0,32	0/0:5,0:15:11.92:0,12,266	0/0:12,0:23:24.08:0,24,579	1/1:9,7:16:9.03:184,9,0	0/1:15,1:25:19.10:19,0,929	0/1:12,7:20:21.97:212,0,22	0/0:8,0:8:6.02:0,6,165
chr10	37927018	.	C	CTGTG	6531.89	PASS	AB=0.819;AC=45;AF=0.865;AN=52;BaseQRankSum=-3.324;DP=612;FS=1.229;HRun=0;HaplotypeScore=122.2296;InbreedingCoeff=0.4122;MQ=62.84;MQ0=11;MQRankSum=0.332;QD=12.51;ReadPosRankSum=2.216;VQSLOD=4.1949;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:39,0:39:12.04:209,12,0	0/1:7,0:7:17.95:18,0,41	./.	./.	1/1:12,10:22:12.04:285,12,0	1/1:5,9:16:17.53:309,18,0	1/1:10,6:16:8.07:212,8,0	1/1:29,0:29:10.53:135,11,0	1/1:10,12:24:11.78:237,12,0	1/1:14,5:22:33.03:543,33,0	1/1:6,6:11:11.78:226,12,0	1/1:17,0:16:6.02:85,6,0	1/1:7,8:17:11.78:210,12,0	0/1:9,6:17:38.29:65,0,38	1/1:14,9:25:23.06:530,23,0	1/1:10,9:19:21.07:498,21,0	1/1:18,10:32:24.08:511,24,0	1/1:10,12:24:41.56:763,42,0	1/1:25,0:25:9.01:160,9,0	1/1:10,1:17:11.51:165,12,0	1/1:36,2:37:28.88:468,29,0	1/1:7,7:15:8.63:154,9,0	1/1:14,2:16:9.03:159,9,0	0/1:20,0:28:0:0,0,0	1/1:9,5:12:9.03:214,9,0	0/0:33,0:34:20.08:0,20,315	1/1:14,10:27:20.49:378,20,0	0/0:3,0:3:3.01:0,3,47
chr10	37928532	.	TTGTGTG	T	2485.41	PASS	AB=0.930;AC=31;AF=0.596;AN=52;BaseQRankSum=-3.943;DP=483;FS=2.679;HRun=0;HaplotypeScore=127.7815;InbreedingCoeff=-0.1530;MQ=69.93;MQ0=16;MQRankSum=0.471;QD=6.68;ReadPosRankSum=6.488;VQSLOD=1.8652;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:6.02:0,6,130	./.	./.	0/0:21,0:18:12.04:0,12,163	0/1:12,0:13:0:0,0,0	0/1:17,0:17:99:154,0,120	1/1:15,1:15:5.39:49,5,0	1/1:20,0:20:5.02:22,5,0	0/1:19,0:18:9.03:9,0,64	0/1:20,1:21:11.70:217,0,12	0/1:8,7:14:31.40:55,0,31	1/1:9,0:11:10.28:131,10,0	0/1:15,0:15:73.43:189,0,73	0/0:10,1:9:3.01:0,3,57	0/1:17,1:18:99:305,0,161	0/1:12,1:12:25.47:29,0,25	0/0:21,1:22:5.96:0,6,54	0/1:13,5:18:18.34:174,0,18	1/1:17,0:16:9.19:193,9,0	1/1:10,2:13:5.88:74,6,0	1/1:35,2:34:2.32:57,2,0	0/1:16,1:17:99:167,0,226	1/1:8,0:8:6.02:81,6,0	1/1:24,0:29:23.62:263,24,0	0/1:15,0:14:99:165,0,110	0/1:20,2:22:67.19:159,0,67	0/1:14,0:14:60.32:139,0,60	1/1:1,0:2:1.36:3,1,0
chr10	37928562	.	G	GCA	1429.16	PASS	AB=0.978;AC=25;AF=0.463;AN=54;BaseQRankSum=3.312;DP=540;FS=3.096;HRun=0;HaplotypeScore=131.8916;InbreedingCoeff=-0.3448;MQ=45.54;MQ0=32;MQRankSum=2.827;QD=3.20;ReadPosRankSum=1.594;VQSLOD=2.2377;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:36:12.03:0,12,163	0/0:6,0:5:6.02:0,6,84	./.	0/0:6,0:5:15.05:0,15,218	1/1:9,1:9:1.42:5,1,0	0/1:14,0:14:60.28:60,0,111	1/1:26,0:23:6.02:83,6,0	0/1:30,0:28:70.22:70,0,651	1/1:20,2:20:8.09:126,8,0	0/1:26,0:23:47.87:48,0,356	0/1:16,0:15:31.14:37,0,31	0/1:14,0:13:23.59:24,0,108	0/1:13,0:13:40.06:40,0,90	0/1:14,1:13:16.12:16,0,37	0/1:21,0:21:62.47:97,0,62	1/1:17,0:16:11.04:140,11,0	0/1:28,2:29:76.59:77,0,88	0/1:24,0:24:72.21:72,0,254	0/1:14,0:12:23.23:23,0,197	0/0:10,0:10:5.50:0,6,39	0/1:47,0:39:3.60:4,0,45	0/1:19,0:17:68.82:69,0,176	0/1:13,1:14:48.51:49,0,98	0/1:34,2:36:55.36:295,0,55	0/1:22,1:21:99:119,0,144	0/0:22,0:19:41.43:0,41,569	0/1:14,0:13:18.72:137,0,19	0/0:8,0:6:15.01:0,15,183
chr10	37928564	.	G	GCA	2412.47	PASS	AB=0.955;AC=26;AF=0.481;AN=54;BaseQRankSum=1.370;DP=536;FS=3.985;HRun=0;HaplotypeScore=128.0098;InbreedingCoeff=-0.1305;MQ=45.26;MQ0=32;MQRankSum=4.979;QD=5.52;ReadPosRankSum=1.478;VQSLOD=2.9255;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:37:12:0,12,142	0/0:6,0:5:6.02:0,6,82	./.	0/0:5,0:4:12.04:0,12,163	0/0:7,3:9:3.01:0,3,39	0/1:12,2:14:75.65:198,0,76	1/1:27,0:24:2.68:15,3,0	0/1:29,0:27:10.26:10,0,661	0/1:20,2:20:6.78:7,0,31	0/1:26,0:23:99:233,0,145	1/1:16,0:15:8.76:83,9,0	0/0:13,0:12:16.67:0,17,164	1/1:11,1:12:18.92:236,19,0	1/1:17,0:13:3.26:19,3,0	0/1:18,3:21:6.55:295,0,7	0/1:15,2:16:6.22:150,0,6	0/1:28,1:28:24.39:66,0,24	0/1:23,0:23:99:354,0,129	0/1:15,0:13:89.60:176,0,90	1/1:9,1:10:5.52:62,6,0	0/1:44,1:37:9.02:51,0,9	0/1:17,1:17:82.16:82,0,135	0/0:14,0:14:6.10:0,6,129	0/1:36,0:36:21.71:22,0,177	0/1:22,1:21:11.05:234,0,11	0/1:22,0:19:27.67:28,0,437	1/1:12,2:13:8.55:256,9,0	0/0:9,0:7:11.21:0,11,160
chr10	37928570	.	GCA	G	4693.07	PASS	AB=0.831;AC=43;AF=0.827;AN=52;BaseQRankSum=5.772;DP=526;FS=14.252;HRun=0;HaplotypeScore=117.3839;InbreedingCoeff=-0.2488;MQ=45.72;MQ0=33;MQRankSum=5.040;QD=8.97;ReadPosRankSum=2.538;VQSLOD=3.9855;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:37,2:37:36.76:37,0,52	1/1:6,1:6:9.01:115,9,0	./.	./.	1/1:12,0:11:9.03:131,9,0	1/1:11,2:13:19.94:240,20,0	1/1:10,17:24:6.94:61,7,0	0/1:23,6:28:99:167,0,467	1/1:7,15:20:6.85:66,7,0	0/1:12,10:19:50.84:342,0,51	1/1:17,0:16:8.84:83,9,0	1/1:13,0:12:10.31:81,10,0	1/1:8,3:11:20.02:173,20,0	1/1:10,7:13:2.63:12,3,0	1/1:18,3:21:35.93:379,36,0	1/1:15,3:17:24.04:294,24,0	0/1:11,19:29:34.52:75,0,35	0/1:17,5:22:23.59:405,0,24	0/1:15,0:13:30.10:315,0,30	1/1:5,6:11:2.80:49,3,0	1/1:22,21:35:8.51:91,9,0	1/1:15,2:15:27.05:341,27,0	0/1:14,1:15:52.02:84,0,52	1/1:31,3:34:21.08:228,21,0	1/1:19,3:20:38.19:417,38,0	0/1:11,13:20:99:228,0,144	1/1:9,4:12:11.75:263,12,0	0/1:9,0:7:18.35:18,0,118
chr10	37928572	.	ATGTG	A	489.16	PASS	AB=0.822;AC=8;AF=0.154;AN=52;BaseQRankSum=-0.175;DP=528;FS=15.001;HRun=0;HaplotypeScore=142.5265;InbreedingCoeff=0.3791;MQ=45.88;MQ0=33;MQRankSum=0.732;QD=3.82;ReadPosRankSum=-0.485;VQSLOD=1.8988;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:38:2.74:12,3,0	0/0:7,0:6:5.98:0,6,47	./.	./.	0/0:12,0:11:2.12:0,2,5	0/0:13,0:13:6.02:0,6,112	0/0:27,0:24:4.40:0,4,15	0/0:27,0:26:20.23:0,20,210	0/0:22,0:20:3.26:0,3,46	0/0:23,0:20:8.56:0,9,111	0/0:15,0:14:3.01:0,3,61	1/1:4,10:13:15.05:242,15,0	0/0:11,0:11:9.90:0,10,167	0/0:17,0:13:3.01:0,3,53	0/0:21,0:21:14.95:0,15,210	0/0:18,0:17:13.73:0,14,137	0/0:30,0:29:12.02:0,12,164	0/0:21,0:21:17.71:0,18,191	0/0:13,0:11:14.24:0,14,163	0/0:11,0:11:2.83:0,3,21	0/0:44,0:36:7.46:0,7,69	0/0:18,0:16:12.82:0,13,181	0/1:8,7:15:48.50:112,0,48	1/1:14,20:34:15.05:243,15,0	0/0:22,0:20:18.40:0,18,212	0/1:23,1:21:11.11:11,0,420	0/0:13,0:12:17.91:0,18,231	0/0:11,0:9:13.24:0,13,207
chr10	37930074	.	T	TC	18732.36	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-8.416;DP=654;FS=4.454;HRun=2;HaplotypeScore=67.2930;InbreedingCoeff=0.9998;MQ=85.51;MQ0=0;MQRankSum=-6.161;QD=39.27;ReadPosRankSum=3.058;VQSLOD=5.4414;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:60.19:0,60,744	1/1:0,12:12:26.94:389,27,0	0/0:32,0:32:81.17:0,81,956	0/0:19,0:20:48.12:0,48,556	1/1:2,25:27:75.25:1077,75,0	1/1:2,18:20:48.16:691,48,0	1/1:0,25:25:72.24:1036,72,0	1/1:0,27:27:78.18:1096,78,0	1/1:1,20:21:60.20:863,60,0	1/1:0,27:27:81.26:1139,81,0	1/1:0,23:23:57.19:820,57,0	0/0:26,0:26:72.22:0,72,882	1/1:1,23:24:72.24:1030,72,0	1/1:3,22:25:69.18:969,69,0	1/1:0,19:19:51.17:734,51,0	1/1:1,24:25:66.22:950,66,0	1/1:0,26:26:72.24:1037,72,0	1/1:0,13:13:39.13:558,39,0	1/1:0,17:17:51.12:693,51,0	1/1:4,28:32:84.28:1209,84,0	1/1:1,25:26:69.23:993,69,0	1/1:0,26:26:69.23:990,69,0	0/0:21,0:21:63.19:0,63,770	0/0:18,0:18:54.16:0,54,659	1/1:1,34:35:96.32:1382,96,0	0/0:27,1:28:38:0,38,893	1/1:0,27:27:75.25:1075,75,0	0/0:11,0:11:33.10:0,33,409
chr10	37934873	.	A	AT	13131.03	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-11.083;DP=576;FS=0.747;HRun=6;HaplotypeScore=54.8810;InbreedingCoeff=0.9979;MQ=78.97;MQ0=0;MQRankSum=-3.688;QD=32.18;ReadPosRankSum=2.156;VQSLOD=5.1047;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:66.15:0,66,672	1/1:2,8:10:24.08:302,24,0	0/0:21,0:21:40.62:0,41,496	0/0:22,0:22:59.66:0,60,563	1/1:1,18:19:48.11:586,48,0	1/1:2,24:25:72.23:905,72,0	1/1:1,16:17:45.14:566,45,0	1/1:4,21:25:57.15:690,57,0	1/1:2,30:32:72.23:905,72,0	1/1:0,28:28:84.24:1039,84,0	1/1:0,10:10:27.09:340,27,0	0/0:21,0:20:51.11:0,51,519	1/1:1,14:15:39.08:473,39,0	1/1:1,16:17:42.13:528,42,0	1/1:1,23:24:66.21:830,66,0	1/1:4,21:25:57.18:717,57,0	1/1:1,26:27:69.22:867,69,0	1/1:0,24:24:69.22:868,69,0	1/1:0,9:9:27.06:324,27,0	1/1:1,22:23:66.12:789,66,0	1/1:2,14:15:39.12:487,39,0	1/1:4,12:16:39.12:481,39,0	0/0:16,0:16:45.10:0,45,459	0/0:32,0:32:90.16:0,90,902	1/1:4,20:24:57.18:717,57,0	0/0:23,0:23:63.14:0,63,642	1/1:0,21:20:57.18:717,57,0	0/0:6,0:6:18.04:0,18,184
chr10	37937203	.	GGT	G	8360.64	PASS	AB=0.959;AC=47;AF=0.839;AN=56;BaseQRankSum=-3.399;DP=798;FS=17.420;HRun=0;HaplotypeScore=146.6385;InbreedingCoeff=0.2339;MQ=63.39;MQ0=13;MQRankSum=4.519;QD=11.31;ReadPosRankSum=6.975;VQSLOD=3.2608;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,42:51:29.70:733,30,0	1/1:4,0:4:7.85:79,8,0	0/0:55,0:27:29.09:0,29,310	0/1:61,1:24:4.54:5,0,152	1/1:21,0:21:4.66:324,5,0	1/1:25,3:27:0.83:471,1,0	1/1:35,1:36:67.23:510,67,0	1/1:34,3:37:14.88:435,15,0	0/1:20,2:22:7.92:136,0,8	1/1:30,3:31:61.97:498,62,0	1/1:18,1:19:6.22:102,6,0	1/1:31,2:33:32.29:446,32,0	1/1:22,2:24:1.13:260,1,0	1/1:28,2:30:39.34:416,39,0	1/1:24,1:25:22.62:228,23,0	1/1:23,0:23:17.09:115,17,0	1/1:21,3:26:29.69:288,30,0	1/1:23,0:23:19.98:169,20,0	0/1:19,0:19:15.74:317,0,16	0/1:12,1:13:3.73:194,0,4	1/1:51,1:52:14.72:558,15,0	1/1:28,1:29:19.24:305,19,0	1/1:20,2:22:44.39:357,44,0	1/1:41,0:41:72.69:662,73,0	0/1:15,0:15:5.43:73,0,5	1/1:33,0:33:46.92:510,47,0	1/1:14,1:15:23.11:169,23,0	0/0:3,0:2:1.25:0,1,3
chr10	37937244	.	G	GT	1375.03	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=6.547;DP=683;FS=20.327;HRun=1;HaplotypeScore=143.7129;InbreedingCoeff=0.8116;MQ=59.26;MQ0=14;MQRankSum=-1.015;QD=15.28;ReadPosRankSum=1.467;VQSLOD=2.3929;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,126,1659	0/1:5,0:5:1.68:2,0,104	0/0:35,0:12:29.81:0,30,401	0/0:37,1:11:18.24:0,18,345	0/0:19,0:19:22.86:0,23,300	0/0:20,0:19:7.07:0,7,454	0/0:33,0:33:79:0,79,799	0/0:25,0:25:50.25:0,50,529	0/0:32,0:31:62.62:0,63,663	0/0:23,0:22:54.88:0,55,569	0/0:18,0:18:43.69:0,44,483	1/1:26,1:27:4.26:424,4,0	0/0:24,0:24:57.45:0,57,657	0/0:28,0:28:69.72:0,70,788	0/0:18,0:18:41.12:0,41,462	0/0:16,0:16:37.96:0,38,349	0/0:29,0:29:62.62:0,63,739	0/0:22,0:22:56.48:0,56,612	0/0:17,0:16:27.97:0,28,361	0/0:11,0:11:30.14:0,30,331	0/0:45,0:45:84.78:0,85,1091	0/0:28,0:28:66.64:0,67,713	1/1:18,1:18:31.58:300,32,0	1/1:36,3:36:51.15:783,51,0	0/0:17,0:17:44.28:0,44,522	0/0:22,0:22:37.86:0,38,532	0/0:18,0:18:40.63:0,41,450	0/0:5,0:5:15.01:0,15,166
chr10	37937245	.	GA	G	2441.63	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=3.916;DP=667;FS=3.699;HRun=2;HaplotypeScore=133.7055;InbreedingCoeff=0.9754;MQ=59.76;MQ0=12;MQRankSum=-0.871;QD=29.07;ReadPosRankSum=2.680;VQSLOD=3.3329;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,138,1901	0/0:4,0:4:9.50:0,10,135	0/0:33,0:12:30.06:0,30,425	0/0:36,0:10:27.97:0,28,387	0/0:18,0:18:48.16:0,48,707	0/0:18,0:18:50.86:0,51,733	0/0:31,0:31:87.28:0,87,1250	0/0:25,0:25:75.24:0,75,1060	0/0:31,0:30:87.18:0,87,1204	0/0:23,0:22:63.21:0,63,936	0/0:18,0:18:48.14:0,48,712	1/1:3,24:27:63.20:809,63,0	0/0:24,0:24:72.22:0,72,1022	0/0:28,0:28:81.26:0,81,1184	0/0:19,0:19:57.14:0,57,805	0/0:16,0:16:45.15:0,45,670	0/0:29,0:29:81.27:0,81,1183	0/0:21,0:21:57.13:0,57,806	0/0:17,0:16:47.52:0,48,672	0/0:11,0:11:33.11:0,33,483	0/0:43,0:43:99:0,126,1800	0/0:28,0:28:84.20:0,84,1147	1/1:2,16:17:39.08:494,39,0	1/1:3,36:36:99:1282,105,0	0/0:17,0:17:51.17:0,51,749	0/0:22,0:22:66.21:0,66,960	0/0:17,0:17:51.11:0,51,715	0/0:5,0:5:15.05:0,15,225
chr10	37942120	.	AAG	A	16027.67	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=10.069;DP=805;FS=7.218;HRun=0;HaplotypeScore=111.6289;InbreedingCoeff=0.9929;MQ=71.67;MQ0=1;MQRankSum=-3.192;QD=28.77;ReadPosRankSum=2.355;VQSLOD=6.6922;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:54,2:56:67.05:0,67,2103	1/1:0,8:8:20.95:260,21,0	0/0:35,0:34:58.06:0,58,887	0/0:29,0:23:12.36:0,12,502	1/1:3,12:15:36.11:446,36,0	1/1:1,14:15:36.11:446,36,0	1/1:4,34:39:99:1279,105,0	1/1:8,20:28:57.16:694,57,0	1/1:3,30:33:78.24:967,78,0	1/1:5,21:26:63.18:768,63,0	1/1:2,10:12:27.08:335,27,0	0/0:31,0:31:75.26:0,75,1226	1/1:3,26:29:72.23:893,72,0	1/1:6,35:42:50.45:1084,50,0	1/1:3,28:32:84.10:1018,84,0	1/1:5,30:35:81.25:1005,81,0	1/1:5,29:34:87.27:1079,87,0	1/1:9,20:29:57.18:707,57,0	1/1:10,15:24:42.11:507,42,0	1/1:2,22:24:63.20:781,63,0	1/1:10,42:52:99:1488,120,0	1/1:5,21:26:57.18:707,57,0	0/0:27,0:27:66.23:0,66,1074	0/0:40,0:40:99:0,108,1771	1/1:3,23:26:60.19:744,60,0	0/0:24,0:24:63.20:0,63,1008	1/1:3,24:27:66.21:818,66,0	0/0:6,0:6:18.06:0,18,295
chr10	37942311	.	CA	C	4656.41	PASS	AB=0.681;AC=43;AF=0.768;AN=56;BaseQRankSum=1.751;DP=567;FS=14.915;HRun=14;HaplotypeScore=70.0474;InbreedingCoeff=0.3822;MQ=77.01;MQ0=0;MQRankSum=2.088;QD=9.76;ReadPosRankSum=5.177;VQSLOD=2.4875;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,5:28:32.47:0,32,443	1/1:2,6:8:16.77:121,17,0	0/0:30,0:25:29.96:0,30,264	0/0:20,0:17:6.27:0,6,151	1/1:3,15:18:19.77:280,20,0	1/1:3,10:14:11.69:171,12,0	1/1:7,11:18:4.81:146,5,0	1/1:9,16:26:34.61:230,35,0	0/1:8,17:25:0.42:242,0,0	1/1:9,20:29:3.68:311,4,0	1/1:6,13:19:1.73:157,2,0	1/1:9,8:18:0.49:90,0,0	0/1:8,11:20:43.06:103,0,43	1/1:14,13:28:18.98:243,19,0	1/1:9,21:30:22.71:301,23,0	1/1:7,14:22:12.80:225,13,0	1/1:9,19:29:49.56:334,50,0	1/1:14,7:21:25.11:160,25,0	0/1:8,8:16:24.23:137,0,24	1/1:1,8:9:23.80:164,24,0	1/1:6,8:14:25.04:167,25,0	1/1:2,12:14:34.47:230,34,0	1/1:1,9:11:25.81:170,26,0	1/1:5,16:24:23.17:278,23,0	0/1:8,14:23:12:209,0,12	0/1:19,1:21:11.09:11,0,212	1/1:5,14:20:2.61:176,3,0	0/0:11,0:11:15.01:0,15,136
chr10	37943572	.	A	AT	11549.82	PASS	AB=1.000;AC=49;AF=0.875;AN=56;BaseQRankSum=-2.820;DP=431;FS=8.932;HRun=7;HaplotypeScore=42.6229;InbreedingCoeff=0.8441;MQ=74.71;MQ0=0;MQRankSum=-1.670;QD=29.77;ReadPosRankSum=1.560;VQSLOD=4.9053;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,14:14:30.09:362,30,0	1/1:1,5:6:15.05:181,15,0	0/0:9,0:8:18.02:0,18,169	0/1:6,0:6:2.28:2,0,69	1/1:1,23:24:66.20:797,66,0	1/1:0,23:23:63.19:761,63,0	1/1:2,6:8:15.05:181,15,0	1/1:2,20:22:57.16:677,57,0	1/1:0,18:18:45.14:544,45,0	1/1:3,15:18:45.14:543,45,0	1/1:1,17:18:51.16:616,51,0	1/1:2,6:8:18.06:217,18,0	1/1:2,11:13:30.09:362,30,0	1/1:1,11:12:27.08:326,27,0	1/1:1,12:13:33.10:399,33,0	1/1:3,14:17:36.11:435,36,0	1/1:1,18:19:51.12:601,51,0	1/1:3,13:16:39.12:470,39,0	1/1:1,15:16:45.14:544,45,0	1/1:0,22:22:66.16:781,66,0	1/1:0,14:14:39.12:471,39,0	1/1:2,8:10:24.07:290,24,0	1/1:7,9:16:4.11:322,4,0	1/1:0,6:6:15.05:181,15,0	1/1:1,20:21:60.18:724,60,0	0/0:23,0:23:63.10:0,63,608	1/1:4,24:28:63.19:761,63,0	0/0:11,0:11:27.04:0,27,261
chr10	37943879	.	GGT	G	2138.30	PASS	AB=0.892;AC=28;AF=0.500;AN=56;BaseQRankSum=5.734;DP=497;FS=4.650;HRun=0;HaplotypeScore=72.8661;InbreedingCoeff=0.5296;MQ=74.86;MQ0=7;MQRankSum=0.902;QD=7.37;ReadPosRankSum=2.377;VQSLOD=3.0022;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:28:12.28:0,12,106	1/1:2,3:5:6.02:68,6,0	0/0:31,0:24:3.01:0,3,46	0/1:33,1:21:6.76:7,0,92	0/1:12,3:15:43.49:43,0,248	1/1:2,8:10:13.24:138,13,0	1/1:8,11:19:24.06:270,24,0	0/1:22,10:32:13.60:256,0,14	0/1:16,0:16:0.96:1,0,317	1/1:8,6:13:20.73:213,21,0	1/1:6,4:10:2.95:34,3,0	0/0:13,0:13:2.73:0,3,20	0/0:11,0:10:15.01:0,15,175	0/0:9,0:9:6.02:0,6,79	1/1:6,10:18:26.27:259,26,0	0/0:24,2:26:0.19:0,0,551	0/0:30,2:32:8.34:0,8,529	1/1:11,10:23:26.24:263,26,0	1/1:12,3:15:5.80:64,6,0	1/1:5,7:13:20.89:217,21,0	1/1:36,7:47:36.47:336,36,0	0/0:8,0:8:12.01:0,12,141	0/0:7,0:7:5.99:0,6,50	0/0:15,0:15:6.01:0,6,66	1/1:6,1:8:6:58,6,0	0/0:17,0:17:18.02:0,18,230	1/1:7,3:10:9.02:101,9,0	0/0:7,0:7:12.04:0,12,179
chr10	37944519	.	CT	C	19330.23	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=4.526;DP=667;FS=0.910;HRun=3;HaplotypeScore=72.7979;InbreedingCoeff=0.9964;MQ=87.55;MQ0=0;MQRankSum=-7.339;QD=33.21;ReadPosRankSum=2.319;VQSLOD=5.3460;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,120,1728	1/1:1,7:8:18.06:223,18,0	0/0:25,0:25:72.01:0,72,977	0/0:20,0:20:42.10:0,42,632	1/1:0,20:20:48.02:557,48,0	1/1:2,24:26:72.23:892,72,0	1/1:3,29:32:75.23:930,75,0	1/1:2,28:30:84.23:1014,84,0	1/1:1,14:15:42.13:521,42,0	1/1:2,23:25:75.15:878,75,0	1/1:1,22:23:63.20:781,63,0	1/1:2,23:25:69.22:855,69,0	1/1:0,23:23:63.20:780,63,0	1/1:2,20:22:51.16:632,51,0	1/1:0,27:27:72.23:893,72,0	1/1:0,21:21:63.20:781,63,0	1/1:2,42:44:99:1562,126,0	1/1:1,16:17:45.14:558,45,0	1/1:1,14:15:42.11:505,42,0	1/1:1,30:31:84.21:1022,84,0	1/1:2,40:42:99:1413,114,0	1/1:3,21:24:57.18:706,57,0	1/1:0,17:17:45.14:558,45,0	1/1:0,30:30:81.25:1004,81,0	1/1:0,17:17:51.16:632,51,0	1/1:0,19:19:57.13:667,57,0	1/1:0,20:20:54.17:669,54,0	1/1:1,8:9:24.07:297,24,0
chr10	37945317	.	AAGGGCTTT	A	30816.66	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=16.501;DP=645;FS=0.659;HRun=0;HaplotypeScore=202.3973;InbreedingCoeff=0.9815;MQ=79.30;MQ0=0;MQRankSum=-18.883;QD=71.01;ReadPosRankSum=2.698;VQSLOD=5.0599;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:63,0:63:99:0,187,7625	1/1:1,12:13:33.11:947,33,0	0/0:23,0:23:57.17:0,57,2035	0/0:23,0:23:63.22:0,63,2410	1/1:2,26:28:75.26:2134,75,0	1/1:0,21:21:48.64:1377,49,0	1/1:1,21:22:51.09:1463,51,0	1/1:3,21:24:63.20:1676,63,0	1/1:2,22:24:66.23:1885,66,0	1/1:1,31:32:93.28:2484,93,0	1/1:0,18:18:45.15:1283,45,0	0/0:20,0:20:50.77:0,51,2235	1/1:2,20:22:48.16:1377,48,0	1/1:1,16:17:39.13:1119,39,0	1/1:2,30:32:84.29:2402,84,0	1/1:1,28:29:78.27:2225,78,0	1/1:0,17:17:36.12:1016,36,0	1/1:2,10:12:21.07:603,21,0	1/1:3,21:24:63.22:1808,63,0	1/1:0,20:20:60.16:1604,60,0	1/1:2,20:22:51.18:1455,51,0	1/1:3,13:16:39.13:1119,39,0	0/0:26,0:26:78.27:0,78,3248	0/0:29,0:29:84.28:0,84,3390	1/1:4,11:15:30.10:860,30,0	0/0:25,0:25:75.25:0,75,3133	1/1:0,26:25:69.24:1980,69,0	0/0:2,0:2:6.02:0,6,268
chr10	37946515	.	CAA	C	287.10	PASS	AB=0.941;AC=5;AF=0.089;AN=56;BaseQRankSum=0.438;DP=501;FS=0.000;HRun=2;HaplotypeScore=137.5590;InbreedingCoeff=0.3932;MQ=39.84;MQ0=18;MQRankSum=-3.081;QD=5.42;ReadPosRankSum=1.146;VQSLOD=-0.1295;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:25:55.57:0,56,887	0/0:3,0:3:3.81:0,4,97	0/0:22,0:9:24.89:0,25,362	0/0:18,0:7:8.34:0,8,101	0/0:26,0:24:46.04:0,46,656	0/0:12,0:9:27.09:0,27,520	0/0:17,0:14:27.45:0,27,409	0/0:36,0:33:63.58:0,64,975	0/0:19,0:17:43.47:0,43,659	0/0:27,0:27:71.02:0,71,962	0/0:19,0:17:35.79:0,36,554	0/1:12,2:14:8.16:108,0,8	0/0:16,0:16:41.10:0,41,528	0/0:18,0:18:39.66:0,40,575	0/0:17,0:17:44.20:0,44,610	0/0:22,0:22:46.17:0,46,650	0/0:16,0:16:33.09:0,33,549	0/1:17,1:16:15.14:15,0,453	0/0:26,0:24:60.79:0,61,1014	0/0:13,0:12:33.09:0,33,572	0/0:5,0:3:5.99:0,6,80	0/0:16,0:14:33.30:0,33,568	1/1:8,3:10:13.60:261,14,0	0/1:9,0:9:4.16:22,0,4	0/0:29,0:26:57.82:0,58,641	0/0:22,0:21:60.97:0,61,988	0/0:15,0:14:28.61:0,29,393	0/0:8,0:8:23.64:0,24,331
chr10	37946521	.	CA	C	4452.88	PASS	AB=1.000;AC=43;AF=0.768;AN=56;BaseQRankSum=2.870;DP=460;FS=6.879;HRun=11;HaplotypeScore=110.3632;InbreedingCoeff=0.6814;MQ=45.67;MQ0=11;MQRankSum=-5.307;QD=12.47;ReadPosRankSum=2.691;VQSLOD=4.3886;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:27:14.67:0,15,162	1/1:1,2:3:5.92:49,6,0	0/0:22,0:11:21.08:0,21,236	0/0:19,0:8:14.99:0,15,137	1/1:14,8:20:25.54:205,26,0	1/1:2,10:10:29.96:244,30,0	1/1:7,7:12:20.91:166,21,0	1/1:17,14:29:31.63:348,32,0	1/1:3,11:14:32.58:268,33,0	1/1:5,14:20:31.91:349,32,0	1/1:11,8:17:23.48:196,23,0	0/1:16,0:16:32.60:33,0,50	1/1:4,9:13:26.44:219,26,0	1/1:0,12:14:32.94:268,33,0	1/1:5,10:15:29.92:243,30,0	1/1:9,11:21:35.90:291,36,0	1/1:4,8:12:14.71:123,15,0	1/1:6,10:15:5.06:168,5,0	1/1:6,15:21:47.58:385,48,0	1/1:5,8:12:26.92:216,27,0	1/1:2,2:3:5.97:46,6,0	1/1:6,8:14:25.43:217,25,0	0/1:14,0:12:25.28:25,0,30	0/1:10,0:10:0.85:1,0,37	1/1:12,9:19:18.39:226,18,0	0/0:25,0:24:53.89:0,54,292	1/1:4,6:11:20.93:167,21,0	0/0:8,0:8:17.05:0,17,102
chr10	37947862	.	ATTTTATAAAAAT	A	5478.72	PASS	AB=0.550;AC=5;AF=0.089;AN=56;BaseQRankSum=11.218;DP=748;FS=0.548;HRun=0;HaplotypeScore=250.3073;InbreedingCoeff=0.7796;MQ=71.47;MQ0=0;MQRankSum=-11.509;QD=77.17;ReadPosRankSum=1.242;VQSLOD=4.1686;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,135,8308	0/0:8,0:8:24.04:0,24,1242	0/0:13,0:13:33.11:0,33,1630	0/0:14,0:14:42.14:0,42,2069	0/0:28,0:28:84.29:0,84,5114	0/0:20,0:20:60.21:0,60,3489	0/0:30,0:30:90.31:0,90,5493	0/0:32,0:32:96.33:0,96,5263	0/0:26,0:26:78.26:0,78,4677	0/0:36,0:36:99:0,108,6418	0/0:26,0:25:78.27:0,78,4628	1/1:2,26:28:63.22:2426,63,0	0/0:21,0:21:63.22:0,63,3665	0/0:35,0:35:99:0,105,6509	0/0:37,0:37:99:0,111,6348	0/0:29,0:29:84.24:0,84,4572	0/0:34,0:33:99:0,99,5857	0/0:21,0:21:60.21:0,60,3707	0/0:24,0:24:72.25:0,72,4178	0/0:25,0:25:75.26:0,75,4319	0/0:41,0:41:99:0,120,7164	0/0:29,0:29:78.27:0,78,4745	1/1:3,18:21:48.16:1826,48,0	0/1:4,18:22:99:1226,0,152	0/0:27,0:27:78.26:0,78,4365	0/0:30,0:30:90.30:0,90,5440	0/0:29,0:29:78.27:0,78,4602	0/0:16,0:15:45.15:0,45,2533
chr10	37948492	.	G	GATGTATTT	6500.76	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-2.916;DP=643;FS=5.774;HRun=0;HaplotypeScore=162.4172;InbreedingCoeff=0.9998;MQ=86.23;MQ0=0;MQRankSum=-10.375;QD=97.03;ReadPosRankSum=-0.148;VQSLOD=4.9295;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,117,3412	0/0:15,0:15:45.15:0,45,1362	0/0:22,0:22:36.07:0,36,1101	0/0:25,0:25:53.71:0,54,1428	0/0:15,0:15:45.15:0,45,1322	0/0:20,0:20:60.21:0,60,1753	0/0:24,0:24:69.24:0,69,2012	0/0:22,0:22:66.22:0,66,1931	0/0:23,0:23:66.23:0,66,1803	0/0:23,0:23:66.23:0,66,1877	0/0:14,0:14:42.14:0,42,1251	1/1:5,13:22:48.16:2001,48,0	0/0:14,0:14:42.14:0,42,1253	0/0:21,0:21:63.22:0,63,1830	0/0:26,0:26:78.27:0,78,2321	0/0:16,0:16:45.14:0,45,1249	0/0:33,0:33:96.33:0,96,2747	0/0:30,0:30:90.31:0,90,2541	0/0:13,0:13:33.11:0,33,940	0/0:32,0:32:96.30:0,96,2656	0/0:26,0:26:78.25:0,78,2131	0/0:23,0:23:69.21:0,69,1930	1/1:3,14:19:48.12:1993,48,0	1/1:5,18:26:63.21:2506,63,0	0/0:23,0:23:63.22:0,63,1849	0/0:31,0:31:90.30:0,90,2622	0/0:22,0:22:66.23:0,66,1985	0/0:19,0:19:48.16:0,48,1369
chr10	37951323	.	T	TTCGA	14791.19	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-15.683;DP=684;FS=3.713;HRun=0;HaplotypeScore=111.0927;InbreedingCoeff=0.9484;MQ=88.91;MQ0=1;MQRankSum=-6.502;QD=52.64;ReadPosRankSum=0.146;VQSLOD=6.0452;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,138,2422	1/1:4,1:5:3.01:79,3,0	0/0:25,0:25:66.20:0,66,1080	0/0:28,0:28:62.75:0,63,1057	0/0:20,0:20:51.17:0,51,918	1/1:1,11:13:27.09:707,27,0	1/1:6,23:31:63.22:1646,63,0	1/1:7,19:26:51.17:1311,51,0	0/0:21,0:21:60.19:0,60,1062	1/1:3,19:22:57.20:1490,57,0	1/1:2,5:7:15.05:392,15,0	0/0:32,0:32:87.28:0,87,1525	0/0:27,0:27:75.26:0,75,1362	0/0:18,0:18:45.15:0,45,808	1/1:4,20:24:48.16:1226,48,0	0/0:21,0:21:60.20:0,60,1044	0/0:31,0:31:87.24:0,87,1519	1/1:2,27:30:69.24:1797,69,0	1/1:7,13:22:48.15:1113,48,0	1/1:4,12:16:27.09:688,27,0	1/1:7,34:43:93.31:2316,93,0	0/0:25,0:25:54.19:0,54,982	0/0:22,0:22:60.19:0,60,1041	0/0:41,0:41:99:0,111,1916	1/1:8,14:23:42.14:1028,42,0	0/0:31,1:32:2.69:0,3,1340	1/1:3,11:18:42.14:998,42,0	0/0:11,0:11:33.11:0,33,600
chr10	37954744	.	GGT	G	3016.21	PASS	AB=0.769;AC=28;AF=0.500;AN=56;BaseQRankSum=-0.837;DP=627;FS=2.980;HRun=0;HaplotypeScore=118.6268;InbreedingCoeff=0.4729;MQ=65.49;MQ0=6;MQRankSum=2.984;QD=8.11;ReadPosRankSum=2.209;VQSLOD=3.2966;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:46:27.03:0,27,280	1/1:4,5:10:17.88:181,18,0	0/0:31,0:22:3.01:0,3,45	0/0:19,0:14:3.01:0,3,45	0/0:23,0:23:8.99:0,9,75	0/1:12,7:20:6.92:191,0,7	0/1:23,6:31:5.05:133,0,5	1/1:25,8:33:24.40:211,24,0	0/0:13,0:17:8.98:0,9,90	1/1:10,9:19:18.03:189,18,0	1/1:11,4:15:9.01:92,9,0	1/1:12,10:22:18.05:200,18,0	0/0:16,0:23:5.93:0,6,52	0/0:8,0:17:15:0,15,130	1/1:11,12:25:11.88:366,12,0	0/0:8,0:14:11.04:0,11,85	0/0:18,0:24:18.02:0,18,181	0/1:7,7:15:9.14:190,0,9	0/1:13,4:16:13:109,0,13	1/1:12,2:15:11.38:100,11,0	1/1:32,18:51:38.85:415,39,0	0/0:28,0:28:12.01:0,12,122	1/1:10,5:17:23.72:219,24,0	1/1:6,10:20:20.89:214,21,0	1/1:6,5:13:20.51:174,21,0	0/1:21,1:23:20.48:20,0,244	0/1:16,10:25:35.26:206,0,35	0/0:8,0:8:3.01:0,3,45
chr10	37957888	.	G	GA	8624.24	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=14.647;DP=657;FS=4.661;HRun=8;HaplotypeScore=125.6475;InbreedingCoeff=0.9994;MQ=86.22;MQ0=0;MQRankSum=-5.638;QD=24.78;ReadPosRankSum=-0.980;VQSLOD=3.3342;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:57.02:0,57,521	1/1:1,15:16:42.12:485,42,0	0/0:33,0:33:61.54:0,62,548	0/0:20,0:20:45.02:0,45,407	0/0:25,0:25:66.03:0,66,604	1/1:3,17:20:51.15:589,51,0	1/1:4,13:17:39.12:450,39,0	1/1:10,27:37:90.18:991,90,0	0/0:23,0:24:59.04:0,59,523	1/1:8,18:27:60.01:672,60,0	1/1:0,24:24:69.21:796,69,0	0/0:23,0:23:63.03:0,63,576	0/0:17,0:17:48.03:0,48,439	0/0:20,0:20:48.02:0,48,439	1/1:5,6:12:20.99:222,21,0	0/0:23,0:23:69.02:0,69,627	0/0:29,0:29:74.97:0,75,672	1/1:5,23:28:54.16:623,54,0	1/1:2,12:14:36.11:412,36,0	1/1:3,21:24:55.05:625,55,0	1/1:3,15:18:39.12:450,39,0	0/0:22,0:22:63.03:0,63,576	0/0:25,0:25:63.01:0,63,571	0/0:25,0:25:66.04:0,66,604	1/1:3,23:26:60.18:689,60,0	1/1:12,1:39:73.79:389,74,0	1/1:3,30:32:90.27:1038,90,0	1/1:0,1:13:34.26:193,34,0
chr10	37960842	.	TA	T	6418.73	PASS	AB=0.573;AC=46;AF=0.821;AN=56;BaseQRankSum=8.577;DP=493;FS=1.807;HRun=12;HaplotypeScore=63.6377;InbreedingCoeff=0.7097;MQ=69.76;MQ0=0;MQRankSum=-1.446;QD=15.47;ReadPosRankSum=0.556;VQSLOD=5.7655;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,3:37:34.68:0,35,709	1/1:2,5:7:14.94:116,15,0	1/1:7,0:6:3.56:10,4,0	0/0:9,0:10:11.97:0,12,104	1/1:2,11:14:27.95:197,28,0	1/1:2,8:10:23.90:186,24,0	1/1:3,21:26:66.83:499,67,0	1/1:8,16:26:45.82:331,46,0	1/1:4,14:21:14.54:266,15,0	1/1:4,10:14:29.86:232,30,0	1/1:3,8:11:17.90:139,18,0	1/1:2,14:17:40.88:308,41,0	1/1:2,14:18:45.89:337,46,0	1/1:3,10:13:26.88:209,27,0	1/1:4,16:21:49.83:377,50,0	1/1:3,7:10:17.92:139,18,0	1/1:10,21:31:70.70:536,71,0	1/1:4,16:20:44.77:343,45,0	1/1:7,16:24:51.87:384,52,0	0/1:3,9:13:1.51:163,0,2	1/1:2,8:11:25.94:192,26,0	1/1:2,18:20:47.79:371,48,0	0/1:5,12:18:22.10:202,0,22	1/1:7,21:29:55.78:424,56,0	1/1:2,9:13:30:203,30,0	0/0:17,1:18:21.85:0,22,403	1/1:5,14:19:32.86:255,33,0	0/0:12,1:13:3.80:0,4,208
chr10	37960956	.	GA	G	4199.38	PASS	AB=0.722;AC=36;AF=0.643;AN=56;BaseQRankSum=-1.878;DP=432;FS=27.666;HRun=7;HaplotypeScore=76.8851;InbreedingCoeff=0.4918;MQ=41.62;MQ0=28;MQRankSum=-1.984;QD=13.12;ReadPosRankSum=4.776;VQSLOD=1.4188;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:38:72.18:0,72,888	1/1:4,2:5:9:84,9,0	1/1:5,0:1:2.88:15,3,0	0/0:3,0:2:2.99:0,3,24	1/1:10,5:14:12.01:121,12,0	1/1:4,5:8:10.77:120,11,0	0/1:13,6:16:22.26:125,0,22	1/1:12,13:21:36.08:367,36,0	1/1:7,13:20:30.01:293,30,0	0/1:12,6:13:3.21:180,0,3	1/1:7,6:10:17.84:182,18,0	0/0:11,0:10:12.04:0,12,151	1/1:2,5:7:15.03:153,15,0	1/1:8,9:15:33.07:336,33,0	1/1:16,9:22:9.61:330,10,0	1/1:6,16:21:39.07:395,39,0	1/1:6,10:15:6.46:180,6,0	0/1:4,6:10:5.18:135,0,5	1/1:6,10:15:0.36:271,0,0	0/1:8,8:15:26.89:186,0,27	0/1:10,2:10:2.52:45,0,3	1/1:4,9:12:18.03:182,18,0	0/0:15,0:14:17.89:0,18,202	0/0:18,0:17:38.57:0,39,402	0/1:6,7:12:0.65:215,0,1	0/0:14,0:13:21.54:0,22,265	1/1:12,10:22:15:283,15,0	0/0:8,0:7:18.06:0,18,226
chr10	37960964	.	GAAC	G	538.82	PASS	AB=0.983;AC=11;AF=0.196;AN=56;BaseQRankSum=4.639;DP=455;FS=33.420;HRun=0;HaplotypeScore=91.9123;InbreedingCoeff=-0.0037;MQ=40.28;MQ0=26;MQRankSum=0.349;QD=3.77;ReadPosRankSum=-2.463;VQSLOD=-0.1763;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:37:95.71:0,96,1278	0/0:6,0:5:14.79:0,15,137	1/1:7,1:2:5.99:59,6,0	0/1:5,0:2:2.54:14,0,3	0/1:12,0:11:23.84:24,0,32	0/0:11,0:10:10.01:0,10,164	0/0:20,0:17:40.65:0,41,379	0/0:30,0:27:13.83:0,14,452	0/1:15,1:16:72.99:86,0,73	0/0:24,0:20:9.38:0,9,392	0/0:18,0:14:25.41:0,25,274	0/0:13,0:12:14.91:0,15,144	0/1:9,0:9:19.15:61,0,19	0/1:17,0:15:99:105,0,100	0/0:22,0:19:47.50:0,48,425	0/1:20,0:19:71.82:113,0,72	0/1:18,2:20:28.71:160,0,29	0/0:12,0:11:11.83:0,12,258	0/1:25,0:23:10.97:11,0,433	0/0:16,0:15:19.56:0,20,222	0/0:11,0:9:13.35:0,13,79	0/1:11,0:10:26.09:54,0,26	0/0:14,0:13:23.87:0,24,202	0/0:19,0:17:22.63:0,23,340	0/0:15,0:14:27.91:0,28,209	0/0:13,0:13:29.76:0,30,320	0/0:19,0:19:27.24:0,27,409	0/0:9,0:8:20.03:0,20,171
chr10	37960967	.	CAAA	C	854.29	PASS	AB=0.845;AC=13;AF=0.232;AN=56;BaseQRankSum=4.468;DP=464;FS=2.092;HRun=17;HaplotypeScore=92.9497;InbreedingCoeff=0.6825;MQ=41.93;MQ0=27;MQRankSum=-1.032;QD=7.77;ReadPosRankSum=3.096;VQSLOD=-0.2048;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:41:99:0,106,1281	0/0:4,0:5:9.03:0,9,119	0/1:11,0:3:2.32:13,0,2	0/0:5,0:2:4.96:0,5,19	1/1:5,5:10:8.87:92,9,0	0/0:11,0:11:26.99:0,27,287	0/0:18,0:16:48.03:0,48,583	0/0:29,0:27:37.30:0,37,403	1/1:10,3:15:15.94:137,16,0	0/0:24,0:20:48.21:0,48,591	0/0:20,0:17:41.78:0,42,436	0/0:6,0:13:6.02:0,6,78	1/1:4,4:8:13.46:125,13,0	1/1:14,1:14:8.84:88,9,0	0/0:22,0:20:30.02:0,30,398	1/1:7,10:17:28.51:302,29,0	0/1:17,2:20:11.56:152,0,12	0/0:11,0:10:22.97:0,23,295	0/0:25,0:23:34.85:0,35,415	0/0:14,0:14:20.61:0,21,202	0/0:11,0:9:16.76:0,17,161	0/1:6,5:11:5.36:119,0,5	0/0:12,0:12:16.98:0,17,175	0/0:19,0:17:27.03:0,27,346	0/0:14,0:15:30.07:0,30,360	0/0:11,0:18:32.99:0,33,340	0/0:16,0:18:38.91:0,39,437	0/0:9,0:8:8.99:0,9,97
chr10	37961444	.	CT	C	4723.38	PASS	AB=0.697;AC=37;AF=0.661;AN=56;BaseQRankSum=4.540;DP=561;FS=0.449;HRun=11;HaplotypeScore=80.2336;InbreedingCoeff=0.5797;MQ=65.17;MQ0=10;MQRankSum=1.577;QD=11.78;ReadPosRankSum=0.720;VQSLOD=4.6469;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:30:61.37:0,61,602	1/1:1,8:9:23.86:184,24,0	0/0:33,0:10:9.36:0,9,56	0/1:20,0:10:12.85:20,0,13	1/1:8,11:19:32.66:244,33,0	1/1:1,20:21:14.16:270,14,0	1/1:5,18:23:35.94:296,36,0	1/1:9,27:36:72.63:573,73,0	1/1:10,4:13:32.79:252,33,0	1/1:7,13:20:6.38:259,6,0	1/1:6,12:18:23.91:238,24,0	0/0:19,0:18:38.96:0,39,395	0/1:6,8:14:12.04:86,0,12	1/1:7,9:16:19.48:146,19,0	0/1:5,13:18:17.44:83,0,17	1/1:4,10:15:19.78:145,20,0	1/1:6,17:23:29.66:229,30,0	0/1:17,12:28:80.19:309,0,80	1/1:7,16:22:52.83:404,53,0	1/1:7,17:24:18.55:332,19,0	1/1:7,3:10:18.43:144,18,0	1/1:2,16:18:38.75:307,39,0	0/0:13,0:13:26.92:0,27,261	0/0:26,0:26:47.16:0,47,640	0/1:4,14:18:14.66:105,0,15	0/0:27,0:27:59.70:0,60,597	1/1:4,9:13:12.22:99,12,0	0/0:11,0:10:21.04:0,21,216
chr10	37964517	.	T	TA	615.29	PASS	AC=12;AF=0.222;AN=54;BaseQRankSum=4.282;DP=365;FS=19.021;HRun=3;HaplotypeScore=50.0629;InbreedingCoeff=0.8238;MQ=49.88;MQ0=29;MQRankSum=-1.395;QD=11.61;ReadPosRankSum=-0.633;VQSLOD=0.4056;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:10:11.99:0,12,128	0/0:8,0:7:21.06:0,21,251	0/0:21,0:14:25.09:0,25,307	0/0:24,0:14:26.16:0,26,310	1/1:1,3:4:9.03:125,9,0	0/0:6,0:6:14.98:0,15,161	0/0:27,0:17:39.01:0,39,432	0/0:12,0:4:12.04:0,12,144	1/1:0,2:2:3.01:42,3,0	0/0:18,0:15:33.10:0,33,394	0/0:8,0:8:15:0,15,163	0/0:11,0:8:14.88:0,15,179	1/1:3,12:7:12.04:162,12,0	1/1:4,9:7:12.04:167,12,0	0/0:17,0:14:24.07:0,24,286	1/1:4,8:7:6.02:83,6,0	./.	0/0:17,0:9:21.06:0,21,251	0/0:14,0:5:15.05:0,15,180	0/0:12,0:11:20.98:0,21,219	0/0:14,0:12:24.01:0,24,269	1/1:1,6:7:17.89:200,18,0	0/0:4,0:4:6.02:0,6,72	0/0:12,0:10:3.01:0,3,36	0/0:11,0:11:24.03:0,24,271	0/0:15,0:13:35.98:0,36,373	0/0:21,0:16:35.97:0,36,395	0/0:8,0:7:12.04:0,12,144
chr10	37964539	.	A	AG	5142.69	PASS	AC=48;AF=0.923;AN=52;BaseQRankSum=1.849;DP=367;FS=1.611;HRun=4;HaplotypeScore=31.3746;InbreedingCoeff=0.5870;MQ=47.11;MQ0=20;MQRankSum=-6.183;QD=16.86;ReadPosRankSum=4.370;VQSLOD=3.6777;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,13:5:9.03:123,9,0	1/1:0,6:5:12.04:164,12,0	0/0:28,0:23:57.10:0,57,618	0/0:22,0:14:39.11:0,39,442	1/1:1,11:12:21.07:286,21,0	1/1:0,11:11:18.06:245,18,0	1/1:5,16:11:18.06:245,18,0	./.	1/1:0,5:4:3.01:41,3,0	1/1:1,13:12:26.68:368,27,0	1/1:0,10:10:18.03:224,18,0	1/1:1,5:2:3.01:41,3,0	1/1:1,15:9:6.02:82,6,0	1/1:2,9:6:12.04:154,12,0	1/1:2,16:12:15.05:204,15,0	1/1:0,11:5:6.02:82,6,0	1/1:1,12:3:3.01:41,3,0	1/1:0,16:7:17.99:223,18,0	1/1:2,6:3:6.02:82,6,0	1/1:2,10:11:24.07:305,24,0	1/1:5,7:11:6.02:82,6,0	1/1:0,10:10:24.08:327,24,0	1/1:0,7:7:9.03:123,9,0	./.	1/1:3,10:13:18.06:245,18,0	1/1:1,18:17:48.16:640,48,0	1/1:1,26:20:42.14:573,42,0	1/1:1,13:13:18.06:246,18,0
chr10	37964956	.	CTGTGTGTGTGTTGTGTGTGTGTG	C	668.59	PASS	AB=1.000;AC=5;AF=0.093;AN=54;BaseQRankSum=0.578;DP=632;FS=17.745;HRun=0;HaplotypeScore=260.3656;InbreedingCoeff=0.2095;MQ=67.85;MQ0=55;MQRankSum=-2.519;QD=9.04;ReadPosRankSum=-0.895;VQSLOD=0.7747;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:5,22:25:12.04:641,12,0	0/0:9,0:9:8.84:0,9,313	0/0:54,0:30:66.68:0,67,1749	0/0:56,0:28:50.89:0,51,949	0/1:17,0:11:29.13:29,0,342	0/0:19,0:18:29.19:0,29,1473	0/0:26,0:26:40.03:0,40,1108	0/0:21,0:20:32.38:0,32,1175	0/0:19,0:16:6.02:0,6,421	0/0:24,0:21:49.87:0,50,2607	0/0:11,0:11:17.52:0,18,998	./.	0/0:9,0:7:6.02:0,6,364	0/1:14,0:9:97.99:98,0,179	0/0:19,0:19:26.64:0,27,791	0/1:16,0:10:17.09:17,0,1205	0/0:33,0:22:3.01:0,3,165	0/0:21,0:20:53.29:0,53,2555	0/0:29,0:27:52.09:0,52,1073	0/0:12,0:11:20.73:0,21,925	0/0:37,0:37:58.44:0,58,2207	0/0:20,0:17:12.04:0,12,920	0/0:13,0:10:3.01:0,3,209	0/0:32,0:24:15.05:0,15,1324	0/0:19,0:19:32.67:0,33,1538	0/0:23,0:22:63.04:0,63,2925	0/0:19,0:19:39.18:0,39,1759	0/0:16,0:15:15.05:0,15,1164
chr10	37964962	.	GTGTGT	G	617.93	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=1.168;DP=693;FS=28.041;HRun=0;HaplotypeScore=122.4748;InbreedingCoeff=0.5787;MQ=58.26;MQ0=84;MQRankSum=-3.318;QD=2.54;ReadPosRankSum=-1.663;VQSLOD=0.4236;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:22:12.04:153,12,0	0/0:9,0:9:8.70:0,9,111	0/0:50,0:26:69.17:0,69,867	0/0:52,0:24:50.88:0,51,616	1/1:17,1:11:9.03:138,9,0	0/1:21,0:20:5.87:6,0,342	0/0:34,0:33:39.47:0,39,296	0/0:20,0:19:1.66:0,2,234	1/1:20,1:17:5.05:68,5,0	0/0:26,0:23:22.38:0,22,600	0/0:12,0:12:17.81:0,18,231	0/0:23,0:18:6.02:0,6,68	1/1:11,0:9:4.72:17,5,0	1/1:16,1:10:15.05:215,15,0	0/0:23,0:22:26.43:0,26,200	0/1:16,0:10:71.11:106,0,71	1/1:35,0:21:2.88:15,3,0	0/0:24,0:22:53.77:0,54,522	0/0:32,0:25:51.73:0,52,383	0/0:14,0:12:16.21:0,16,165	0/1:43,0:41:47.77:48,0,393	1/1:21,1:17:8.15:23,8,0	1/1:15,0:12:2.12:7,2,0	0/0:43,0:31:14.85:0,15,185	0/0:20,0:18:32.16:0,32,277	0/0:29,0:27:39.96:0,40,1074	0/0:23,0:22:33.36:0,33,364	0/0:16,0:14:15.05:0,15,359
chr10	37965748	.	GA	G	2853.99	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=3.720;DP=573;FS=0.380;HRun=9;HaplotypeScore=73.6858;InbreedingCoeff=0.9983;MQ=84.09;MQ0=0;MQRankSum=0.020;QD=18.53;ReadPosRankSum=3.926;VQSLOD=3.9230;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:54.14:0,54,614	0/0:14,0:14:42.12:0,42,486	0/0:34,0:33:29.51:0,30,572	0/0:25,0:21:34.04:0,34,351	1/1:3,27:30:71.98:650,72,0	0/0:23,0:23:69.10:0,69,733	0/0:20,0:20:54.11:0,54,588	0/0:25,0:25:60.15:0,60,680	1/1:5,16:21:45.01:412,45,0	0/0:25,0:25:69.20:0,69,792	0/0:18,0:18:54.14:0,54,614	0/0:18,0:18:45.13:0,45,520	1/1:4,19:23:54.02:493,54,0	1/1:2,13:15:29.98:274,30,0	0/0:18,0:18:51.14:0,51,581	1/1:3,11:15:26.05:226,26,0	1/1:3,23:27:59.06:527,59,0	0/0:27,0:27:78.19:0,78,878	0/0:22,0:22:57.11:0,57,636	0/0:30,0:30:90.25:0,90,1022	0/0:9,0:9:24.07:0,24,278	1/1:3,20:23:34.50:471,35,0	0/0:11,0:11:30.09:0,30,347	0/0:19,0:19:54.15:0,54,616	0/0:14,0:14:39.12:0,39,451	0/0:25,0:25:72.20:0,72,818	0/0:15,0:15:42.11:0,42,475	0/0:8,0:8:21.06:0,21,243
chr10	37969037	.	G	GT	4316.68	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-10.929;DP=601;FS=1.324;HRun=5;HaplotypeScore=60.2064;InbreedingCoeff=0.9997;MQ=69.35;MQ0=0;MQRankSum=-0.855;QD=32.21;ReadPosRankSum=1.848;VQSLOD=5.4933;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,140,1488	0/0:11,0:11:33.08:0,33,354	0/0:19,0:19:43.96:0,44,451	0/0:23,0:23:46.37:0,46,513	1/1:4,15:19:45.15:590,45,0	0/0:13,0:13:36.09:0,36,387	0/0:23,0:23:51.08:0,51,535	0/0:26,0:24:66.16:0,66,702	1/1:1,24:25:63.16:807,63,0	0/0:19,0:19:51.12:0,51,541	0/0:21,0:21:60.14:0,60,637	0/0:25,0:25:69.14:0,69,725	1/1:1,16:17:42.14:553,42,0	1/1:3,18:21:45.12:574,45,0	0/0:31,0:31:90.23:0,90,966	1/1:1,13:14:36.08:455,36,0	1/1:2,19:21:57.19:750,57,0	0/0:22,0:22:60.12:0,60,633	0/0:16,0:16:48.10:0,48,502	0/0:18,0:18:54.14:0,54,579	0/0:22,0:22:63.16:0,63,677	1/1:1,15:17:45.15:589,45,0	0/0:19,0:19:54.14:0,54,580	0/0:17,0:17:45.03:0,45,455	0/0:19,0:19:57.12:0,57,597	0/0:30,0:30:75.19:0,75,805	0/0:30,0:30:87.22:0,87,934	0/0:9,0:9:27.07:0,27,290
chr10	37969159	.	G	GA	798.95	PASS	AB=0.824;AC=9;AF=0.161;AN=56;BaseQRankSum=5.019;DP=403;FS=5.454;HRun=0;HaplotypeScore=90.8637;InbreedingCoeff=-0.2168;MQ=69.95;MQ0=6;MQRankSum=-4.827;QD=4.99;ReadPosRankSum=-3.162;VQSLOD=2.0185;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:66.13:0,66,858	0/0:3,0:3:6.02:0,6,70	0/0:47,0:20:41.23:0,41,332	0/1:53,0:26:67.95:68,0,164	0/0:8,0:8:11.93:0,12,137	0/1:6,3:9:99:111,0,128	0/1:13,5:18:99:157,0,218	0/1:9,7:13:99:167,0,146	0/0:10,0:10:11.80:0,12,114	0/0:9,0:8:9.98:0,10,213	0/0:7,0:7:9.89:0,10,121	0/0:15,0:15:35.50:0,36,368	0/0:8,0:8:18.05:0,18,225	0/0:11,0:10:30.06:0,30,335	0/0:15,0:15:8.82:0,9,72	0/0:10,0:9:12.04:0,12,163	0/0:9,0:9:12.04:0,12,167	0/0:10,0:10:13.39:0,13,217	0/1:5,5:8:87.46:145,0,87	0/1:10,4:12:62.11:137,0,62	0/1:17,2:16:59.66:60,0,222	0/0:13,0:13:36:0,36,414	0/0:8,0:8:5.55:0,6,120	0/0:12,0:12:27.45:0,27,324	0/1:5,0:5:4.22:4,0,53	0/1:12,2:14:87.12:87,0,314	0/0:15,0:15:15.03:0,15,179	0/0:2,0:2:6.02:0,6,83
chr10	37969165	.	G	GA	2946.97	PASS	AB=0.779;AC=19;AF=0.339;AN=56;BaseQRankSum=2.093;DP=418;FS=0.000;HRun=0;HaplotypeScore=93.2876;InbreedingCoeff=-0.2389;MQ=70.97;MQ0=5;MQRankSum=-1.802;QD=10.38;ReadPosRankSum=-1.390;VQSLOD=3.2374;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:31,0:31:3.04:3,0,405	0/0:4,0:4:3.59:0,4,10	0/0:36,0:17:34.08:0,34,294	0/1:51,1:29:81.42:81,0,198	0/1:12,0:12:44.80:163,0,45	0/1:3,5:8:5.85:175,0,6	0/1:9,7:18:99:183,0,146	0/1:7,18:23:91.85:596,0,92	0/0:12,0:12:11.24:0,11,83	0/1:9,0:8:12.53:13,0,114	0/0:6,0:12:0.63:0,1,29	0/1:5,11:16:53.52:275,0,54	0/1:7,0:7:9.23:9,0,36	1/1:6,4:9:19.57:247,20,0	0/0:16,0:16:3.75:0,4,10	0/0:10,0:9:9.63:0,10,66	0/0:10,0:10:9.82:0,10,69	0/0:10,0:10:9.51:0,10,149	1/1:3,10:11:27.08:364,27,0	0/1:7,5:12:20.47:223,0,20	0/1:6,8:14:53.13:72,0,53	0/1:6,8:15:66.68:250,0,67	0/0:7,0:7:2.54:0,3,79	0/1:9,4:13:99:106,0,151	0/1:7,0:7:6.45:6,0,33	0/1:5,9:16:99:338,0,164	0/0:15,0:15:7.54:0,8,54	0/0:2,0:2:5.38:0,5,49
chr10	37969167	.	G	GGAGGAGA	9585.06	PASS	AB=1.000;AC=53;AF=0.946;AN=56;BaseQRankSum=-2.934;DP=440;FS=2.223;HRun=0;HaplotypeScore=112.3179;InbreedingCoeff=0.2561;MQ=70.72;MQ0=5;MQRankSum=-2.804;QD=24.64;ReadPosRankSum=1.756;VQSLOD=4.6126;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:11,17:30:6.01:859,6,0	1/1:0,0:5:6.02:184,6,0	0/1:33,0:16:29.76:30,0,277	0/0:49,0:29:10.43:0,10,274	1/1:5,9:16:15.05:363,15,0	1/1:6,0:6:15.05:291,15,0	1/1:16,0:18:18.06:426,18,0	1/1:26,0:25:60.21:1290,60,0	1/1:3,9:13:6.02:151,6,0	1/1:4,2:14:22.32:527,22,0	1/1:10,0:11:6.01:116,6,0	1/1:16,0:16:24.07:568,24,0	1/1:6,1:7:6.02:226,6,0	1/1:9,3:11:30.09:803,30,0	1/1:3,0:16:6.02:154,6,0	1/1:3,6:8:2.76:112,3,0	1/1:3,7:10:3.01:114,3,0	1/1:5,0:10:3.01:93,3,0	1/1:13,0:11:30.09:587,30,0	1/1:13,0:13:21.06:416,21,0	1/1:14,0:14:9.03:188,9,0	1/1:14,1:15:24.07:554,24,0	1/1:4,3:10:0.38:1,0,0	1/1:11,1:12:10.85:256,11,0	1/1:2,3:16:6.02:184,6,0	1/1:14,0:16:33.11:744,33,0	1/1:1,2:18:9.03:258,9,0	1/1:1,0:3:3.01:92,3,0
chr10	37969174	.	A	AGAGGAGA	11573.38	PASS	AB=1.000;AC=53;AF=0.946;AN=56;BaseQRankSum=-2.745;DP=434;FS=0.000;HRun=0;HaplotypeScore=124.7977;InbreedingCoeff=0.1170;MQ=72.82;MQ0=4;MQRankSum=-3.187;QD=29.37;ReadPosRankSum=2.879;VQSLOD=4.5773;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:28:9.02:964,9,0	1/1:5,0:5:6.02:184,6,0	0/1:27,0:17:29.76:30,0,277	0/0:39,0:24:0.26:0,0,261	1/1:15,0:15:15.05:363,15,0	1/1:9,0:9:15.05:291,15,0	1/1:21,0:21:36.12:852,36,0	1/1:26,0:24:60.20:1285,60,0	1/1:11,0:11:6.02:151,6,0	1/1:16,0:16:28.34:642,28,0	1/1:12,0:12:6.01:116,6,0	1/1:15,0:16:33.10:794,33,0	1/1:4,5:10:6.02:226,6,0	1/1:12,0:11:30.09:803,30,0	1/1:16,0:16:9.03:209,9,0	1/1:9,0:8:5.77:172,6,0	1/1:10,0:10:6.02:217,6,0	1/1:8,0:8:12.04:316,12,0	1/1:14,0:12:30.09:597,30,0	1/1:15,0:13:24.07:454,24,0	1/1:19,0:17:9.03:188,9,0	1/1:16,0:16:30.09:719,30,0	1/1:9,0:9:2.92:78,3,0	1/1:14,0:14:16.87:433,17,0	1/1:16,0:16:6.02:184,6,0	1/1:15,0:15:42.14:955,42,0	1/1:18,0:18:9.03:257,9,0	1/1:7,0:7:3.01:92,3,0
chr10	37969848	.	TGC	T	1964.32	PASS	AB=0.928;AC=26;AF=0.464;AN=56;BaseQRankSum=-5.949;DP=423;FS=1.734;HRun=0;HaplotypeScore=104.4265;InbreedingCoeff=0.5321;MQ=47.95;MQ0=11;MQRankSum=0.132;QD=8.36;ReadPosRankSum=2.680;VQSLOD=3.5874;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:23.75:0,24,165	0/1:5,0:5:4.70:60,0,5	0/0:15,0:5:5.16:0,5,74	0/0:13,0:7:14.86:0,15,122	0/0:16,0:15:23.46:0,23,166	1/1:16,0:15:16.23:228,16,0	1/1:26,0:25:38.84:305,39,0	1/1:15,0:13:15.02:157,15,0	0/0:8,0:8:11.51:0,12,73	0/1:21,0:18:4.09:231,0,4	1/1:11,0:11:15.45:124,15,0	0/1:8,0:8:1.22:1,0,37	0/0:13,0:13:9.04:0,9,88	0/0:12,0:12:17.82:0,18,124	1/1:7,0:6:6.23:50,6,0	0/0:11,0:11:13:0,13,109	0/0:15,0:15:27.23:0,27,175	1/1:6,0:6:1.09:64,1,0	0/1:11,0:11:1.49:60,0,1	1/1:14,1:14:26.51:201,27,0	1/1:47,0:42:43.92:370,44,0	0/0:18,0:18:13.93:0,14,156	0/0:17,0:17:10.70:0,11,132	0/0:30,0:30:9.01:0,9,162	0/1:19,0:19:32.86:33,0,55	0/1:3,10:11:5.06:154,0,5	1/1:12,0:12:2.76:81,3,0	1/1:3,0:3:3.01:34,3,0
chr10	37969850	.	CGTGTGTGTGTGT	C	547.88	PASS	AB=0.939;AC=13;AF=0.250;AN=52;BaseQRankSum=0.370;DP=411;FS=1.096;HRun=0;HaplotypeScore=157.6487;InbreedingCoeff=0.4055;MQ=46.47;MQ0=11;MQRankSum=-1.368;QD=5.77;ReadPosRankSum=-0.270;VQSLOD=2.7797;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:0.47:0,0,1	0/0:5,0:5:9.03:0,9,281	./.	0/0:12,0:6:3.48:0,3,45	1/1:12,3:15:4.78:53,5,0	0/0:17,0:16:20.89:0,21,769	0/0:22,0:21:16.61:0,17,494	0/0:16,0:14:24.01:0,24,361	1/1:7,0:7:0.47:1,0,0	0/0:19,0:17:24.07:0,24,509	0/0:11,0:11:12.51:0,13,519	0/0:8,0:8:12.98:0,13,293	1/1:11,2:13:14.85:325,15,0	./.	0/0:7,0:6:2.86:0,3,163	0/1:7,1:9:19.47:163,0,19	0/1:15,0:15:10.95:16,0,11	0/0:6,0:6:5.98:0,6,82	0/0:11,0:11:9.50:0,10,235	0/0:15,0:14:9.02:0,9,224	0/0:45,0:40:25.90:0,26,906	1/1:16,0:18:3:27,3,0	0/0:17,0:17:18.06:0,18,424	0/0:25,0:28:12.03:0,12,241	0/0:19,0:19:27.14:0,27,1144	0/1:14,0:12:90.86:91,0,98	0/0:11,0:11:19.24:0,19,464	1/1:3,0:3:2.68:11,3,0
chr10	37969905	.	G	GA	469.82	PASS	AB=0.808;AC=14;AF=0.292;AN=48;BaseQRankSum=4.518;DP=244;FS=0.000;HRun=1;HaplotypeScore=93.6616;InbreedingCoeff=-0.0804;MQ=55.07;MQ0=7;MQRankSum=-1.592;QD=6.44;ReadPosRankSum=-1.365;VQSLOD=-0.0306;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,5:6:2.42:31,2,0	0/1:2,1:4:29.46:75,0,29	0/0:31,0:12:4.19:0,4,243	0/0:41,0:20:55.50:0,56,641	0/0:9,1:9:1.24:0,1,5	0/1:5,0:5:52.49:59,0,52	0/0:12,0:12:14.07:0,14,179	0/0:10,0:9:17.17:0,17,150	./.	0/0:7,0:7:5.09:0,5,146	0/1:1,1:2:0:0,0,0	./.	0/0:5,0:5:2.99:0,3,23	0/0:8,0:8:11.71:0,12,118	./.	0/1:4,1:5:36.64:37,0,45	0/1:4,2:7:46.07:112,0,46	0/0:3,0:3:3.01:0,3,40	0/0:13,0:13:30.08:0,30,415	0/0:2,0:2:2.91:0,3,36	0/0:17,0:14:7.82:0,8,119	0/1:6,2:8:1.35:22,0,1	0/1:5,2:7:12.15:12,0,15	1/1:5,0:5:2.98:22,3,0	0/1:7,4:11:22.96:158,0,23	0/1:4,0:3:9.24:9,0,38	0/1:8,0:9:59.54:64,0,60	./.
chr10	37969912	.	GGGTGGGGGGT	G	1952.43	PASS	AB=1.000;AC=21;AF=0.389;AN=54;BaseQRankSum=5.346;DP=243;FS=0.677;HRun=0;HaplotypeScore=104.1432;InbreedingCoeff=0.6336;MQ=60.23;MQ0=4;MQRankSum=-5.260;QD=24.71;ReadPosRankSum=0.878;VQSLOD=3.0003;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:6,0:6:77.02:77,0,114	0/0:4,0:4:4.88:0,5,194	0/0:26,0:13:29.74:0,30,626	0/0:34,0:19:44.24:0,44,1491	1/1:8,0:8:21.07:270,21,0	0/0:3,0:3:9.03:0,9,332	0/0:14,0:14:36.94:0,37,894	0/0:8,0:8:8.92:0,9,171	1/1:4,0:4:9.03:110,9,0	0/0:7,0:7:11.96:0,12,302	0/1:3,0:3:0.59:1,0,120	1/1:1,3:4:3.01:40,3,0	1/1:5,0:5:9.03:158,9,0	1/1:10,0:10:17.10:399,17,0	0/0:5,0:4:11.90:0,12,153	1/1:9,0:9:13.99:248,14,0	1/1:6,0:6:15:289,15,0	0/0:3,0:3:6.02:0,6,227	0/0:12,0:12:24.01:0,24,841	0/0:3,0:3:0.87:0,1,2	0/0:16,0:15:10.52:0,11,427	1/1:8,0:8:9.03:143,9,0	1/1:4,5:9:18.53:396,19,0	./.	0/1:7,0:7:6.72:7,0,131	0/0:6,0:5:8.97:0,9,170	0/0:13,0:13:30.83:0,31,638	0/0:2,0:2:1.36:0,1,4
chr10	37969913	.	GGTGGGGGGT	G	2268.45	PASS	AB=1.000;AC=23;AF=0.426;AN=54;BaseQRankSum=4.190;DP=247;FS=3.226;HRun=0;HaplotypeScore=101.9145;InbreedingCoeff=0.6705;MQ=62.40;MQ0=3;MQRankSum=-6.039;QD=27.66;ReadPosRankSum=0.582;VQSLOD=3.3132;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:6,0:6:53.47:53,0,102	0/0:4,0:4:5.13:0,5,159	0/0:25,0:13:29.40:0,29,549	0/0:34,0:19:47.29:0,47,1473	1/1:2,6:8:21.07:323,21,0	0/0:3,0:3:9.03:0,9,326	0/0:16,0:16:17.72:0,18,781	0/0:9,0:9:10.47:0,10,162	1/1:1,3:4:9.03:158,9,0	0/0:8,0:8:11.85:0,12,272	0/1:3,0:3:0.77:1,0,107	1/1:4,0:4:2.98:21,3,0	1/1:2,3:5:9.03:221,9,0	1/1:3,7:10:17.50:531,18,0	0/0:5,0:4:11.90:0,12,176	1/1:1,8:9:13.81:326,14,0	1/1:3,3:6:15:365,15,0	0/0:4,0:4:9.03:0,9,248	0/0:12,0:12:21.89:0,22,732	0/0:3,0:3:0.45:0,0,1	0/0:16,0:15:11.51:0,12,377	1/1:2,6:8:9.03:165,9,0	1/1:9,0:9:18.45:257,18,0	./.	0/1:8,0:8:2:2,0,179	0/0:6,0:5:8.97:0,9,157	0/0:13,0:13:30.03:0,30,557	1/1:2,0:2:5.77:34,6,0
chr10	37969914	.	GTGGGGGGT	G	1669.99	PASS	AB=1.000;AC=23;AF=0.426;AN=54;BaseQRankSum=4.813;DP=244;FS=0.000;HRun=0;HaplotypeScore=99.6264;InbreedingCoeff=0.5729;MQ=60.71;MQ0=2;MQRankSum=-6.866;QD=17.58;ReadPosRankSum=0.081;VQSLOD=2.1225;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:6,0:6:52.03:52,0,90	0/0:4,0:4:5.13:0,5,149	0/0:22,0:12:29.72:0,30,509	0/0:33,0:19:46.29:0,46,1275	1/1:7,1:8:20.91:220,21,0	0/0:3,0:3:9.03:0,9,296	0/1:17,0:17:9.85:10,0,618	0/0:8,0:8:10.47:0,10,149	1/1:3,1:4:8.96:98,9,0	0/0:8,0:8:11.74:0,12,245	0/0:4,0:4:2.22:0,2,118	1/1:3,0:3:2.97:20,3,0	1/1:3,2:5:9.03:152,9,0	1/1:7,3:10:17.83:392,18,0	0/0:5,0:4:11.90:0,12,149	1/1:9,0:9:14.12:234,14,0	1/1:6,0:6:15:279,15,0	0/0:5,0:5:9.02:0,9,220	0/0:11,0:12:23.85:0,24,631	0/0:3,0:3:0.45:0,0,1	0/0:15,0:14:11.58:0,12,316	1/1:8,0:8:8.98:119,9,0	1/1:7,0:9:18.42:235,18,0	./.	0/1:8,0:8:10.37:10,0,147	0/0:5,0:4:8.97:0,9,144	0/0:13,0:13:2.68:0,3,425	1/1:1,0:2:5.77:34,6,0
chr10	37969919	.	G	GAACA	1575.47	PASS	AB=0.955;AC=18;AF=0.333;AN=54;BaseQRankSum=4.894;DP=234;FS=11.228;HRun=0;HaplotypeScore=90.7785;InbreedingCoeff=0.4865;MQ=67.35;MQ0=0;MQRankSum=-6.117;QD=17.90;ReadPosRankSum=-0.991;VQSLOD=1.9032;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,0:6:1.87:41,2,0	0/0:4,0:4:6.49:0,6,105	0/1:20,0:11:7.79:8,0,371	0/0:28,0:17:27.38:0,27,858	1/1:7,1:8:21.07:441,21,0	0/0:3,0:3:9.03:0,9,177	0/0:16,0:16:42:0,42,718	0/0:9,0:9:9.02:0,9,151	1/1:4,0:4:9.03:184,9,0	0/0:7,0:7:7.84:0,8,131	0/0:6,0:6:12.03:0,12,217	1/1:3,0:3:3:29,3,0	0/1:5,0:5:4.75:151,0,5	0/1:10,0:10:15.27:67,0,15	0/0:4,0:4:6.02:0,6,108	1/1:8,1:9:11.73:250,12,0	1/1:3,3:6:8.87:207,9,0	0/0:6,0:6:9.03:0,9,188	0/0:10,0:10:27.09:0,27,519	0/0:3,0:3:0.47:0,0,1	0/0:14,0:13:11.19:0,11,250	1/1:6,2:8:9.03:200,9,0	0/1:7,2:9:4.65:167,0,5	./.	0/0:10,0:10:13.67:0,14,188	0/0:3,0:3:3.01:0,3,63	0/0:12,0:12:30.09:0,30,556	0/0:2,0:2:3.31:0,3,15
chr10	37969921	.	GT	G	749.93	PASS	AB=0.988;AC=33;AF=0.589;AN=56;BaseQRankSum=5.646;DP=237;FS=0.635;HRun=1;HaplotypeScore=84.5025;InbreedingCoeff=0.2309;MQ=71.41;MQ0=0;MQRankSum=-7.175;QD=4.31;ReadPosRankSum=-1.746;VQSLOD=-0.3076;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:6,0:6:0.69:1,0,17	0/1:4,0:4:5.95:6,0,7	0/1:17,3:12:8.82:9,0,144	0/0:29,1:18:32.06:0,32,430	1/1:8,0:8:20.62:133,21,0	0/0:4,0:4:8.23:0,8,36	0/1:16,0:16:51.03:68,0,51	0/1:8,0:8:13.31:13,0,14	1/1:4,0:4:8.92:77,9,0	0/0:7,0:7:8.14:0,8,34	0/1:6,0:6:6.55:7,0,21	1/1:3,0:3:2.97:20,3,0	1/1:5,0:5:8.81:69,9,0	1/1:11,0:11:17.46:93,17,0	0/1:4,0:4:5.21:10,0,5	1/1:9,0:9:13.79:79,14,0	1/1:6,0:6:13.62:76,14,0	0/0:7,0:7:8.50:0,8,60	0/1:10,0:10:4.18:4,0,118	1/1:3,0:3:0.47:1,0,0	0/0:12,0:11:10.76:0,11,54	1/1:8,0:8:8.82:57,9,0	1/1:5,2:9:17.38:113,17,0	0/1:8,0:8:0:0,0,0	0/1:11,0:11:9.35:26,0,9	0/0:3,0:3:2.73:0,3,12	0/1:13,0:13:23.24:23,0,32	1/1:1,1:2:5.77:34,6,0
chr10	37970927	.	GTGGGCTA	G	2862.36	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=7.733;DP=740;FS=0.000;HRun=0;HaplotypeScore=217.1325;InbreedingCoeff=0.9583;MQ=88.16;MQ0=0;MQRankSum=-10.432;QD=54.01;ReadPosRankSum=0.466;VQSLOD=3.3367;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,117,4475	0/0:9,0:9:27.08:0,27,984	0/0:26,0:26:75.24:0,75,2715	0/0:29,0:29:84.28:0,84,2767	0/0:41,0:41:99:0,114,4498	0/0:31,0:31:87.30:0,87,3436	0/0:32,0:32:93.32:0,93,3469	0/0:35,0:35:99:0,102,3874	0/0:25,0:25:72.22:0,72,2582	0/0:43,0:43:99:0,126,4689	0/0:25,0:25:69.24:0,69,2696	1/1:0,19:19:51.18:1324,51,0	0/0:24,0:24:66.23:0,66,2478	0/0:16,0:16:48.15:0,48,1815	0/0:30,0:30:87.30:0,87,3428	0/0:30,0:30:90.30:0,90,3452	0/0:16,0:16:48.16:0,48,1852	0/0:6,0:6:18.06:0,18,695	0/0:21,0:21:60.21:0,60,2192	0/0:35,0:35:99:0,99,3864	0/0:25,0:25:75.26:0,75,2881	0/0:36,0:36:99:0,102,3816	1/1:1,22:23:60.21:1557,60,0	1/1:3,8:11:6.02:117,6,0	0/0:24,0:24:69.24:0,69,2568	0/0:33,0:33:99:0,99,3930	0/0:43,0:43:99:0,126,4831	0/0:13,0:13:36.12:0,36,1307
chr10	37971338	.	TAAAAAC	T	19323.45	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=4.797;DP=604;FS=10.691;HRun=0;HaplotypeScore=189.8983;InbreedingCoeff=0.9594;MQ=58.07;MQ0=1;MQRankSum=-4.847;QD=35.85;ReadPosRankSum=2.619;VQSLOD=3.9506;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:69.19:0,69,1988	1/1:3,1:4:9.02:127,9,0	0/0:21,0:16:38.80:0,39,1091	0/0:12,0:10:19.61:0,20,497	1/1:15,18:33:66.20:1292,66,0	1/1:19,3:22:42.06:583,42,0	1/1:13,0:13:29.90:262,30,0	1/1:17,16:33:36.16:1190,36,0	1/1:13,9:22:51.08:917,51,0	1/1:18,0:18:29.83:343,30,0	1/1:32,2:34:83.90:1044,84,0	1/1:5,11:16:45.05:825,45,0	1/1:7,13:20:48.04:921,48,0	1/1:3,14:17:45.15:948,45,0	1/1:39,5:44:99:1329,99,0	1/1:5,10:15:42.09:770,42,0	1/1:10,11:21:53.95:951,54,0	1/1:20,1:21:10.75:519,11,0	1/1:10,3:12:36.06:504,36,0	1/1:25,2:27:63.01:752,63,0	1/1:12,1:13:27.09:381,27,0	1/1:9,15:24:51.17:1064,51,0	1/1:9,14:23:54.09:1054,54,0	1/1:3,7:10:24.08:504,24,0	1/1:22,2:24:54.01:696,54,0	1/1:33,3:35:93.25:1383,93,0	1/1:26,3:28:62.51:735,63,0	1/1:7,0:7:18.06:230,18,0
chr10	37971353	.	AAAT	A	13320.45	PASS	AB=0.778;AC=49;AF=0.875;AN=56;BaseQRankSum=7.569;DP=602;FS=0.971;HRun=0;HaplotypeScore=188.0033;InbreedingCoeff=0.7454;MQ=53.61;MQ0=2;MQRankSum=-4.897;QD=24.90;ReadPosRankSum=7.013;VQSLOD=4.7348;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:63.19:0,63,974	1/1:1,2:3:8.69:88,9,0	0/0:27,0:19:56.61:0,57,956	0/0:15,0:11:20.54:0,21,352	1/1:29,0:29:59.88:471,60,0	1/1:4,20:24:50.49:694,50,0	1/1:3,10:13:26.73:356,27,0	1/1:27,2:28:22.54:562,23,0	1/1:17,0:17:28.20:293,28,0	1/1:3,11:14:36.89:420,37,0	1/1:10,26:35:64.82:1205,65,0	1/1:18,0:18:23.48:239,23,0	1/1:20,0:20:39.27:287,39,0	1/1:18,0:18:41.48:330,41,0	1/1:5,39:44:98.95:1481,99,0	1/1:12,0:12:34.19:238,34,0	1/1:25,0:25:29.43:285,29,0	1/1:3,18:21:11.25:566,11,0	0/1:15,6:19:83.69:301,0,84	1/1:3,18:21:63.08:910,63,0	1/1:2,11:13:0.95:402,1,0	1/1:26,0:26:29.55:393,30,0	1/1:25,0:24:46.59:369,47,0	1/1:13,0:13:20.17:183,20,0	1/1:4,20:25:53.35:778,53,0	1/1:5,28:32:95.58:1350,96,0	1/1:5,23:27:62:818,62,0	1/1:0,7:7:18.06:302,18,0
chr10	37971358	.	AAAC	A	5976.84	PASS	AB=1.000;AC=32;AF=0.571;AN=56;BaseQRankSum=1.550;DP=606;FS=14.331;HRun=0;HaplotypeScore=211.6786;InbreedingCoeff=0.2530;MQ=53.88;MQ0=3;MQRankSum=-9.624;QD=12.80;ReadPosRankSum=4.463;VQSLOD=3.4319;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:25:36.12:0,36,474	0/0:3,0:3:0.11:0,0,31	0/0:31,0:23:39.10:0,39,719	0/0:15,0:10:14.98:0,15,228	1/1:5,23:28:72.08:916,72,0	0/1:23,0:24:10.86:11,0,71	0/1:10,0:12:29.04:47,0,29	0/0:23,0:31:23.88:0,24,333	1/1:7,10:17:36.01:431,36,0	0/0:12,0:14:2.79:0,3,235	0/1:32,0:32:66.49:66,0,117	1/1:2,17:19:36.12:492,36,0	1/1:3,16:19:48.16:654,48,0	1/1:4,14:18:45.09:589,45,0	0/1:45,0:45:60.21:60,0,74	1/1:3,10:13:30.06:387,30,0	1/1:8,16:24:43.69:580,44,0	0/1:21,0:21:18.55:19,0,63	0/0:19,0:17:15.98:0,16,136	0/1:22,0:23:20.33:20,0,140	0/1:13,0:13:0.31:1,0,0	1/1:8,18:26:51.17:707,51,0	1/1:4,20:23:50.99:628,51,0	1/1:3,10:14:20.91:285,21,0	0/1:26,0:26:5.11:5,0,199	0/1:31,0:31:23.44:23,0,116	0/1:28,0:27:41.32:41,0,204	1/1:7,0:7:4.01:12,4,0
chr10	37971638	.	TG	T	22173.84	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=4.548;DP=682;FS=3.626;HRun=2;HaplotypeScore=106.2377;InbreedingCoeff=0.9970;MQ=83.89;MQ0=0;MQRankSum=-7.268;QD=36.00;ReadPosRankSum=5.519;VQSLOD=4.6894;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:72.21:0,72,1031	1/1:0,6:6:18.06:234,18,0	0/0:25,0:25:72.24:0,72,1072	0/0:17,0:17:50.73:0,51,651	1/1:2,35:37:96.31:1245,96,0	1/1:0,29:29:78.25:1012,78,0	1/1:0,17:17:51.17:662,51,0	1/1:1,25:26:75.20:920,75,0	1/1:0,20:20:57.19:740,57,0	1/1:0,35:35:99:1296,102,0	1/1:1,22:23:66.21:857,66,0	1/1:0,35:35:99:1324,102,0	1/1:0,23:23:63.20:818,63,0	1/1:0,21:21:54.18:701,54,0	1/1:0,21:21:63.20:818,63,0	1/1:0,20:20:54.18:701,54,0	1/1:1,24:25:66.21:857,66,0	1/1:0,14:14:42.14:545,42,0	1/1:2,25:27:75.21:945,75,0	1/1:1,37:38:99:1355,111,0	1/1:0,27:27:72.23:935,72,0	1/1:0,25:25:75.20:954,75,0	1/1:0,20:20:60.20:778,60,0	1/1:0,19:19:48.16:621,48,0	1/1:0,35:35:96.03:1246,96,0	1/1:1,22:23:66.21:857,66,0	1/1:0,38:38:99:1324,102,0	1/1:0,12:12:33.11:428,33,0
chr10	37972283	.	C	CCATATCTG	60013.18	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-9.878;DP=791;FS=1.031;HRun=0;HaplotypeScore=188.0399;InbreedingCoeff=0.9661;MQ=71.39;MQ0=0;MQRankSum=-18.750;QD=98.71;ReadPosRankSum=-0.475;VQSLOD=5.2537;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,129,3589	1/1:2,9:12:30.10:1305,30,0	0/0:23,0:23:61.70:0,62,1524	0/0:28,0:28:64.94:0,65,1841	1/1:7,17:24:36.12:1575,36,0	1/1:7,10:17:45.15:1926,45,0	1/1:7,18:27:66.23:2806,66,0	1/1:32,17:50:99:5260,129,0	1/1:11,29:44:99:4442,102,0	1/1:8,15:26:66.22:2803,66,0	1/1:9,14:23:48.16:2068,48,0	0/0:31,0:31:87.30:0,87,2399	1/1:6,24:34:84.29:3639,84,0	1/1:7,26:34:3.34:3503,3,0	1/1:6,28:35:87.30:3811,87,0	1/1:7,20:28:72.25:3152,72,0	1/1:6,10:16:39.13:1626,39,0	1/1:7,7:15:39.09:1469,39,0	1/1:14,16:33:87.30:3402,87,0	1/1:6,20:28:63.22:2759,63,0	1/1:13,17:37:45.15:1971,45,0	1/1:7,23:31:63.22:2760,63,0	0/0:23,0:23:63.18:0,63,1677	0/0:32,0:32:90.25:0,90,2362	1/1:8,16:25:45.15:1963,45,0	1/1:9,25:36:99:4249,105,0	1/1:8,13:26:63.17:2602,63,0	1/1:0,7:7:21.07:921,21,0
chr10	37973724	.	A	ATCC	252.62	PASS	AB=0.533;AC=18;AF=0.643;AN=28;BaseQRankSum=0.361;DP=44;FS=0.000;HRun=0;HaplotypeScore=79.7329;InbreedingCoeff=0.1063;MQ=54.18;MQ0=0;MQRankSum=1.639;QD=8.71;ReadPosRankSum=-0.472;VQSLOD=2.8584;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:2,0:2:2.84:0,3,14	0/0:5,0:5:2.75:0,3,53	./.	0/1:0,1:1:0:0,0,0	./.	./.	1/1:1,1:2:5.74:36,6,0	./.	./.	1/1:1,1:2:5.69:78,6,0	./.	0/1:1,2:3:2.60:81,0,3	0/1:0,6:6:11.56:12,0,14	1/1:0,2:2:0.89:2,1,0	./.	0/1:0,1:1:0:0,0,0	./.	./.	./.	1/1:1,1:2:2.99:24,3,0	0/1:1,2:3:2.68:25,0,3	1/1:1,1:2:6:61,6,0	./.	1/1:1,1:2:4.05:13,4,0	0/1:0,3:3:6.44:15,0,6	./.
chr10	37973726	.	AAGGG	A	99.64	PASS	AB=0.667;AC=19;AF=0.864;AN=22;DP=34;FS=0.000;HRun=0;HaplotypeScore=83.2813;InbreedingCoeff=0.2521;MQ=53.57;MQ0=0;QD=3.69;VQSLOD=1.3012;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	./.	1/1:1,0:1:1.25:3,1,0	0/1:6,0:5:0:0,0,0	./.	0/1:0,1:1:0:0,0,0	./.	./.	./.	./.	./.	1/1:1,1:2:2.98:21,3,0	./.	1/1:0,2:2:3:26,3,0	0/1:0,6:6:0:0,0,0	./.	./.	1/1:0,1:1:1.25:3,1,0	./.	./.	./.	./.	1/1:0,2:2:0.47:1,0,0	1/1:0,1:1:3.01:35,3,0	./.	1/1:0,1:2:5.68:40,6,0	1/1:0,3:3:3.01:38,3,0	./.
chr10	37973745	.	G	GACA	64.69	PASS	AB=0.500;AC=13;AF=0.650;AN=20;BaseQRankSum=0.551;DP=26;FS=2.963;HRun=0;HaplotypeScore=88.7069;InbreedingCoeff=-0.0389;MQ=29.00;MQ0=0;MQRankSum=-0.184;QD=3.23;ReadPosRankSum=-0.184;VQSLOD=1.7041;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	./.	./.	./.	./.	1/1:0,1:1:2.74:12,3,0	./.	./.	1/1:0,1:1:2.68:11,3,0	./.	0/1:0,2:2:5.61:34,0,6	0/1:0,6:6:11.56:12,0,14	1/1:0,2:2:0.89:2,1,0	./.	0/0:0,1:1:0.47:0,0,1	./.	0/1:0,1:1:0:0,0,0	./.	./.	0/1:0,2:2:3.33:3,0,6	./.	./.	1/1:0,2:2:5.75:53,6,0	0/1:0,3:3:6.61:18,0,7	./.
chr10	37973761	.	C	CTGGCCA	4003.03	PASS	AB=0.953;AC=29;AF=0.604;AN=48;BaseQRankSum=7.384;DP=314;FS=61.566;HRun=0;HaplotypeScore=296.3113;InbreedingCoeff=-0.1961;MQ=34.42;MQ0=16;MQRankSum=-5.826;QD=13.85;ReadPosRankSum=6.260;VQSLOD=0.8732;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:12,1:12:11.36:152,11,0	./.	./.	./.	0/1:20,0:19:67.73:68,0,324	1/1:4,1:3:2.88:15,3,0	1/1:3,0:2:3.01:60,3,0	1/1:11,0:10:26.25:529,26,0	0/1:20,1:21:99:300,0,233	1/1:3,0:3:9.03:149,9,0	./.	0/1:22,1:23:62.31:368,0,62	0/1:18,0:17:99:299,0,324	0/1:24,2:26:83.30:83,0,284	1/1:5,6:11:3.87:19,4,0	0/0:14,2:15:1.44:0,1,150	0/1:15,0:12:99:129,0,277	0/1:9,1:7:38.65:39,0,142	0/0:2,0:1:0.47:0,0,1	0/0:1,1:2:1.25:0,1,3	1/1:19,0:15:16.22:226,16,0	0/1:21,1:21:7.20:7,0,226	0/1:14,1:14:66.78:80,0,67	0/1:24,1:26:82.03:87,0,82	0/0:3,0:3:6.01:0,6,70	0/1:18,2:20:45.46:953,0,45	1/1:0,3:3:5.85:104,6,0	1/1:5,0:5:12.04:337,12,0
chr10	37973969	.	C	CACACAGAA	418.12	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.316;DP=889;FS=9.685;HRun=0;HaplotypeScore=361.6639;InbreedingCoeff=0.9830;MQ=54.59;MQ0=7;MQRankSum=-4.144;QD=16.08;ReadPosRankSum=-4.175;VQSLOD=0.9056;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:20,5:26:34.21:513,34,0	0/0:9,0:9:15.05:0,15,397	0/0:41,0:25:40.01:0,40,920	0/0:29,0:16:42.01:0,42,859	0/0:41,0:41:99:0,102,2262	0/0:31,0:31:51.15:0,51,1163	0/0:31,0:31:48.62:0,49,1091	0/0:48,0:48:95.17:0,95,2431	0/0:22,0:22:50.96:0,51,1307	0/0:38,0:38:93.29:0,93,2203	0/0:14,0:14:27.08:0,27,628	0/0:32,0:32:69.24:0,69,1777	0/0:43,0:43:81.26:0,81,1991	0/0:35,0:35:78.13:0,78,1750	0/0:39,0:39:78.21:0,78,1793	0/0:33,0:33:54.19:0,54,1394	0/0:24,0:24:60.19:0,60,1481	0/0:31,0:31:63.42:0,63,1238	0/0:18,0:17:36.12:0,36,871	0/0:48,0:48:99:0,120,3014	0/0:57,0:57:73.92:0,74,1676	0/0:28,0:28:57.20:0,57,1318	0/0:38,0:38:65.89:0,66,1620	0/0:31,0:31:58.63:0,59,1422	0/0:24,0:24:51.18:0,51,1311	0/0:38,0:38:86.98:0,87,1816	0/0:26,0:26:57.15:0,57,1334	0/0:13,0:13:39.03:0,39,900
chr10	37974011	.	C	CATAT	38094.54	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-0.529;DP=927;FS=0.000;HRun=0;HaplotypeScore=221.5527;InbreedingCoeff=0.9934;MQ=54.69;MQ0=7;MQRankSum=-4.090;QD=44.56;ReadPosRankSum=6.045;VQSLOD=4.9874;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:34:25.84:211,26,0	1/1:3,9:12:18.06:467,18,0	0/0:36,0:26:53.96:0,54,838	0/0:36,0:27:63.52:0,64,1071	1/1:4,24:28:44.83:1168,45,0	1/1:3,23:26:48.64:1247,49,0	1/1:3,27:31:26.78:690,27,0	1/1:11,35:51:99:2305,117,0	1/1:6,29:37:60.21:1557,60,0	1/1:6,34:43:99:2674,114,0	1/1:0,17:19:33.58:856,34,0	1/1:4,34:40:75.26:1937,75,0	1/1:9,35:45:69.24:1787,69,0	1/1:4,27:32:66.23:1710,66,0	1/1:3,36:40:78.27:2026,78,0	1/1:3,33:36:72.25:1870,72,0	1/1:3,20:23:51.14:1324,51,0	1/1:5,28:34:63.22:1625,63,0	1/1:8,13:24:51.12:1042,51,0	1/1:10,39:50:84.29:2181,84,0	1/1:9,27:36:39.13:1013,39,0	1/1:2,26:28:54.19:1400,54,0	1/1:3,30:33:54.19:1402,54,0	1/1:6,30:36:54.59:1403,55,0	1/1:3,26:29:57.20:1472,57,0	1/1:5,33:39:99:2405,102,0	1/1:5,30:36:66.23:1713,66,0	1/1:4,7:11:24.08:611,24,0
chr10	37974023	.	C	CACAG	3077.75	PASS	AB=0.996;AC=27;AF=0.482;AN=56;BaseQRankSum=15.020;DP=900;FS=3.168;HRun=0;HaplotypeScore=327.1195;InbreedingCoeff=-0.7701;MQ=54.95;MQ0=3;MQRankSum=-6.400;QD=3.75;ReadPosRankSum=14.352;VQSLOD=-0.5702;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:31,4:34:99:100,0,288	0/1:12,0:12:5.93:75,0,6	0/0:39,0:34:73.98:0,74,1272	0/0:41,0:33:74.95:0,75,1524	0/1:27,0:27:89.95:90,0,127	0/1:23,0:23:46.92:47,0,108	0/1:29,0:29:99:187,0,106	0/1:43,0:42:99:241,0,580	0/1:38,0:38:99:168,0,218	0/1:45,0:45:99:124,0,492	0/1:23,0:23:97.15:97,0,190	1/1:35,0:35:0.31:145,0,0	0/1:37,0:37:88.42:182,0,88	0/1:30,0:30:99:132,0,105	0/1:38,0:38:83.20:86,0,83	0/1:36,0:36:99:112,0,231	0/1:23,0:23:65.82:80,0,66	0/1:32,0:32:99:134,0,157	0/1:21,0:21:15.80:16,0,317	0/1:42,0:42:24.61:182,0,25	0/1:30,0:30:40.05:40,0,320	0/1:30,0:30:99:179,0,141	0/1:31,0:31:92.18:92,0,122	0/1:35,0:35:66.44:66,0,87	0/1:31,0:31:0.21:240,0,0	0/1:40,0:40:99:155,0,358	0/1:39,0:38:99:144,0,248	0/1:15,0:15:31.98:115,0,32
chr10	37975675	.	C	CT	1096.75	PASS	AB=0.988;AC=34;AF=0.607;AN=56;BaseQRankSum=-2.030;DP=441;FS=0.663;HRun=15;HaplotypeScore=71.6655;InbreedingCoeff=0.3503;MQ=72.56;MQ0=10;MQRankSum=-1.482;QD=3.36;ReadPosRankSum=-1.248;VQSLOD=-0.0004;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:24,9:34:5.19:352,5,0	1/1:7,0:7:1.51:12,2,0	0/1:35,0:18:3.79:10,0,4	0/0:44,1:18:8.75:0,9,43	0/1:10,1:13:28.13:28,0,31	1/1:12,0:12:12.32:61,12,0	1/1:10,0:11:14.56:87,15,0	1/1:24,0:26:16.59:130,17,0	0/0:7,0:7:2.80:0,3,17	1/1:12,0:12:14.99:80,15,0	1/1:7,1:8:11.52:62,12,0	0/0:11,0:11:0.93:0,1,14	0/1:6,0:7:0.24:9,0,0	0/0:14,0:16:8.25:0,8,42	1/1:7,0:6:10.87:69,11,0	0/0:16,0:18:10.75:0,11,50	0/1:38,0:38:4.70:5,0,138	1/1:16,0:15:5.82:37,6,0	1/1:15,0:15:17.61:118,18,0	1/1:9,0:9:8.79:57,9,0	1/1:7,0:7:5.76:32,6,0	0/0:5,0:5:2.86:0,3,18	0/0:4,0:4:8.80:0,9,53	0/0:7,0:7:9.67:0,10,53	1/1:17,0:17:3.74:59,4,0	0/1:17,0:17:18.74:19,0,32	1/1:17,0:17:0.34:27,0,0	0/1:16,0:15:12.91:13,0,51
chr10	37975690	.	T	TTA	2748.63	PASS	AB=0.791;AC=30;AF=0.536;AN=56;BaseQRankSum=-6.147;DP=461;FS=5.779;HRun=0;HaplotypeScore=56.8806;InbreedingCoeff=0.5644;MQ=57.56;MQ0=29;MQRankSum=1.541;QD=9.29;ReadPosRankSum=-2.477;VQSLOD=1.9731;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:31:24.30:24,0,291	1/1:1,2:4:5.23:56,5,0	0/1:58,0:17:14.59:15,0,46	0/0:63,0:14:8.38:0,8,112	0/0:14,0:14:15.09:0,15,141	1/1:0,14:14:14.98:200,15,0	0/1:2,9:11:3.59:205,0,4	1/1:5,18:24:41.22:617,41,0	0/0:7,0:6:5.83:0,6,37	1/1:0,9:12:30.23:277,30,0	1/1:1,10:12:20.83:213,21,0	0/0:6,0:6:5.87:0,6,37	0/0:8,0:8:14.17:0,14,80	0/0:8,0:8:14.85:0,15,125	1/1:9,0:7:14.68:120,15,0	0/0:11,0:12:17.47:0,17,137	0/0:33,0:33:26.87:0,27,382	1/1:2,18:20:6.02:97,6,0	1/1:5,11:16:31.99:357,32,0	1/1:1,9:9:9.03:141,9,0	1/1:0,4:4:6.02:98,6,0	0/0:2,0:1:3.01:0,3,35	0/0:6,0:6:17.61:0,18,121	0/0:6,0:6:8.92:0,9,82	1/1:3,11:16:6.22:224,6,0	1/1:3,0:14:18.67:176,19,0	1/1:1,13:15:1.83:82,2,0	0/1:7,0:17:8.11:44,0,8
chr10	37975692	.	AT	A	700.14	PASS	AB=0.866;AC=19;AF=0.339;AN=56;BaseQRankSum=-5.402;DP=450;FS=3.256;HRun=10;HaplotypeScore=56.5759;InbreedingCoeff=0.5976;MQ=57.38;MQ0=30;MQRankSum=-0.883;QD=4.52;ReadPosRankSum=2.034;VQSLOD=0.3114;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:48.33:0,48,544	0/0:3,0:3:3.01:0,3,31	0/1:55,0:16:14.36:14,0,40	0/0:63,0:14:17.88:0,18,100	1/1:4,10:14:11.86:80,12,0	0/0:13,0:13:11.96:0,12,104	0/0:11,0:11:14.21:0,14,117	0/0:24,0:23:46.95:0,47,493	1/1:1,4:4:3:26,3,0	0/0:13,0:13:20.97:0,21,191	0/0:11,0:12:20.89:0,21,187	1/1:0,6:6:6:52,6,0	0/1:8,0:8:0.51:85,0,1	0/1:3,5:8:5.17:37,0,5	0/0:9,0:7:16.79:0,17,152	1/1:1,11:12:17.98:152,18,0	1/1:7,26:33:35.94:305,36,0	0/0:20,0:19:3.01:0,3,31	0/0:19,0:14:28.85:0,29,269	0/0:9,0:8:5.69:0,6,42	0/0:4,0:4:5.60:0,6,41	1/1:1,1:1:3:26,3,0	1/1:4,0:4:8.99:76,9,0	1/1:0,7:7:3:26,3,0	0/0:16,0:16:14.78:0,15,136	0/0:16,0:15:34.86:0,35,338	0/0:15,0:15:5.95:0,6,49	0/0:18,0:17:18:0,18,166
chr10	37975862	.	ATC	A	1802.28	PASS	AB=0.610;AC=20;AF=0.370;AN=54;BaseQRankSum=-1.841;DP=435;FS=1.612;HRun=0;HaplotypeScore=92.6208;InbreedingCoeff=0.5716;MQ=55.77;MQ0=2;MQRankSum=4.286;QD=10.92;ReadPosRankSum=1.946;VQSLOD=3.4244;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:26:21.02:0,21,148	0/0:13,0:13:8.93:0,9,65	0/0:19,0:13:1.77:0,2,42	0/0:23,0:15:3:0,3,25	1/1:6,18:24:39.86:423,40,0	0/0:15,0:15:12.38:0,12,91	0/0:16,0:16:9.20:0,9,67	0/0:33,0:31:5.99:0,6,59	0/0:7,0:7:15.05:0,15,229	0/0:13,0:13:12.20:0,12,74	0/0:14,0:14:2.73:0,3,14	1/1:2,0:10:11.13:51,11,0	1/1:3,8:11:24.07:270,24,0	1/1:5,7:12:20.89:217,21,0	0/0:8,0:9:11.92:0,12,95	0/1:7,11:21:7.21:292,0,7	1/1:8,11:20:35.93:386,36,0	0/0:8,0:16:8.97:0,9,70	0/0:10,0:10:5.93:0,6,40	./.	0/0:5,0:5:2.97:0,3,20	1/1:6,4:11:17.88:180,18,0	0/1:5,0:13:16.52:28,0,17	1/1:4,0:8:1.69:17,2,0	0/0:18,0:18:2.94:0,3,18	1/1:10,0:16:2.51:79,3,0	0/0:12,0:13:9.38:0,9,65	1/1:14,0:17:8.52:42,9,0
chr10	37982333	.	A	AACAC	705.71	PASS	AB=0.916;AC=21;AF=0.404;AN=52;BaseQRankSum=0.468;DP=484;FS=2.683;HRun=0;HaplotypeScore=115.9534;InbreedingCoeff=0.2475;MQ=59.07;MQ0=8;MQRankSum=0.291;QD=2.87;ReadPosRankSum=-2.468;VQSLOD=2.0012;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:9.48:0,9,115	0/0:5,0:5:6.02:0,6,93	./.	./.	1/1:5,0:11:5.49:24,5,0	0/0:19,0:19:21.40:0,21,294	0/0:26,0:28:13.16:0,13,220	0/1:19,0:18:13.49:15,0,13	1/1:11,0:16:2.95:20,3,0	1/1:20,0:19:26.16:345,26,0	0/1:9,0:9:17.98:52,0,18	0/0:14,0:15:2.92:0,3,28	0/1:19,0:17:42.18:83,0,42	1/1:27,0:27:2.92:17,3,0	0/0:25,0:25:29.73:0,30,335	1/1:8,0:14:2.66:12,3,0	0/1:21,0:31:19.31:19,0,67	0/0:18,0:19:17.69:0,18,199	0/0:14,0:12:9.02:0,9,118	0/1:14,0:15:9.87:10,0,44	0/1:28,0:29:3.55:4,0,124	0/1:8,0:16:36.13:36,0,40	0/0:10,0:19:11.66:0,12,111	0/0:14,0:25:6.01:0,6,56	0/0:15,0:15:11.39:0,11,361	1/1:5,8:13:12.88:179,13,0	0/0:12,0:12:21.07:0,21,316	1/1:6,0:6:3.01:54,3,0
chr10	37982377	.	C	CACAT	5209.94	PASS	AB=0.959;AC=27;AF=0.482;AN=56;BaseQRankSum=-8.858;DP=640;FS=1.630;HRun=0;HaplotypeScore=122.0373;InbreedingCoeff=0.2109;MQ=58.88;MQ0=18;MQRankSum=1.488;QD=12.23;ReadPosRankSum=-1.863;VQSLOD=4.0496;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:6,0:33:10.59:11,0,56	0/1:8,0:8:23.07:100,0,23	0/0:35,0:21:50.18:0,50,503	0/0:27,0:13:35.80:0,36,335	0/0:16,0:16:24.83:0,25,207	0/1:24,0:23:96.63:252,0,97	0/1:28,0:28:66.15:274,0,66	1/1:30,0:27:52.82:519,53,0	0/0:16,0:16:22.60:0,23,195	1/1:6,21:29:64.09:875,64,0	1/1:2,12:16:6.84:102,7,0	1/1:18,0:18:37.19:350,37,0	0/0:23,0:21:42.19:0,42,374	0/0:23,0:23:40.84:0,41,317	0/1:20,0:20:99:123,0,102	0/0:13,0:13:8.15:0,8,66	0/0:32,0:32:51.40:0,51,475	0/1:17,0:17:84.60:163,0,85	0/1:19,0:18:4.47:322,0,4	1/1:23,0:23:11.12:288,11,0	1/1:31,0:31:50.68:448,51,0	0/0:29,0:29:42.34:0,42,378	0/1:22,0:21:11.35:145,0,11	0/1:32,0:32:4.40:199,0,4	0/1:24,0:24:99:211,0,155	1/1:23,0:23:53.58:562,54,0	0/1:19,0:18:99:201,0,110	1/1:1,0:9:3.01:64,3,0
chr10	37982947	.	GCA	G	215.25	PASS	AB=0.794;AC=3;AF=0.054;AN=56;BaseQRankSum=6.843;DP=916;FS=6.761;HRun=0;HaplotypeScore=187.0311;InbreedingCoeff=-0.0616;MQ=50.02;MQ0=37;MQRankSum=-0.534;QD=3.47;ReadPosRankSum=-3.881;VQSLOD=1.4979;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:34:76.10:0,76,1403	0/0:13,0:13:36.12:0,36,722	0/0:50,0:24:65.92:0,66,1212	0/0:66,1:18:48.16:0,48,843	0/0:25,0:25:30:0,30,582	0/0:29,1:29:4.74:0,5,1382	0/0:44,2:46:95.29:0,95,2025	0/0:37,0:32:93.31:0,93,1823	0/0:44,0:44:71.51:0,72,1176	0/1:23,1:23:8.57:9,0,1042	0/0:22,0:22:15.38:0,15,972	0/0:30,0:30:67.80:0,68,1379	0/0:49,0:49:90:0,90,1591	0/0:35,1:36:63.19:0,63,1147	0/0:27,0:26:45.03:0,45,1316	0/0:32,0:32:51.17:0,51,1009	0/0:21,0:21:20.73:0,21,331	0/0:41,1:42:99:0,102,2271	0/0:27,0:21:59.41:0,59,1079	0/0:13,1:13:36.11:0,36,676	0/0:84,0:83:99:0,174,3983	0/0:20,0:20:15.05:0,15,294	0/0:19,0:18:42.14:0,42,852	0/0:43,0:43:99:0,115,2230	0/0:14,0:14:12.51:0,13,661	0/1:19,9:28:99:219,0,965	0/0:27,0:26:72.24:0,72,1410	0/1:5,5:10:83.09:83,0,278
chr10	37982957	.	ATGTGTG	A	1608.28	PASS	AB=0.627;AC=10;AF=0.192;AN=52;BaseQRankSum=7.007;DP=923;FS=2.238;HRun=0;HaplotypeScore=244.7931;InbreedingCoeff=0.7760;MQ=50.70;MQ0=26;MQRankSum=-5.203;QD=7.70;ReadPosRankSum=1.181;VQSLOD=2.5953;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:37:59.01:0,59,1437	0/0:10,0:12:23.34:0,23,655	./.	./.	0/1:8,14:23:0:0,0,0	0/0:15,0:28:28.45:0,28,545	0/0:23,1:49:19.22:0,19,830	0/0:39,0:33:32.88:0,33,476	1/1:18,29:47:24.08:450,24,0	0/0:29,0:29:53.08:0,53,1207	0/0:18,0:21:35.15:0,35,801	0/0:31,0:34:58.42:0,58,1561	1/1:18,31:50:39.06:710,39,0	1/1:21,10:33:17.69:323,18,0	0/0:29,0:30:51.17:0,51,1338	1/1:13,18:31:5.37:124,5,0	0/1:11,12:24:7.31:154,0,7	0/0:35,0:39:92.54:0,93,2280	0/0:27,0:21:18.95:0,19,485	0/0:17,0:16:36.12:0,36,988	0/0:88,0:90:99:0,136,3143	0/0:8,18:26:2.49:0,2,12	0/0:24,0:23:33.09:0,33,771	0/0:44,0:48:99:0,105,2827	0/0:10,0:12:21.07:0,21,472	0/0:28,0:28:49.99:0,50,614	0/0:24,0:24:60.20:0,60,1681	0/0:13,0:12:12.49:0,12,172
chr10	37984336	.	AC	A	14467.20	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=10.498;DP=794;FS=0.000;HRun=2;HaplotypeScore=83.4606;InbreedingCoeff=0.9999;MQ=86.62;MQ0=0;MQRankSum=-4.583;QD=36.63;ReadPosRankSum=1.229;VQSLOD=5.2756;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,144,2145	1/1:0,12:12:36.12:467,36,0	0/0:29,0:29:87.26:0,87,1262	0/0:24,0:23:69.18:0,69,951	0/0:34,0:34:99:0,99,1464	1/1:1,22:23:63.20:818,63,0	1/1:0,34:34:93.30:1203,93,0	1/1:3,26:29:78.25:1013,78,0	0/0:32,0:32:96.31:0,96,1417	1/1:1,31:32:96.31:1242,96,0	1/1:1,15:16:45.15:584,45,0	0/0:36,0:36:99:0,108,1600	0/0:32,0:32:96.31:0,96,1419	0/0:28,0:28:84.28:0,84,1257	1/1:0,34:34:93.30:1208,93,0	0/0:25,0:25:75.25:0,75,1123	0/0:32,0:32:96.30:0,96,1416	1/1:0,26:26:75.24:974,75,0	1/1:1,29:30:84.26:1075,84,0	1/1:0,26:26:75.24:974,75,0	1/1:0,36:36:99:1402,108,0	0/0:31,0:31:84.28:0,84,1255	0/0:16,0:16:48.16:0,48,720	0/0:32,0:32:93.32:0,93,1392	1/1:1,27:28:72.23:935,72,0	1/1:0,34:34:99:1325,102,0	1/1:0,24:24:63.17:818,63,0	1/1:0,11:11:33.11:428,33,0
chr10	37985761	.	G	GT	4623.59	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-3.222;DP=684;FS=11.028;HRun=3;HaplotypeScore=75.7839;InbreedingCoeff=0.9968;MQ=79.45;MQ0=0;MQRankSum=-1.576;QD=37.59;ReadPosRankSum=3.183;VQSLOD=4.6682;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,38:40:99:1428,102,0	0/0:7,0:7:18.06:0,18,216	0/0:20,0:20:33.65:0,34,394	0/0:18,0:18:23.81:0,24,350	0/0:28,0:28:84.26:0,84,1008	0/0:20,0:20:51.15:0,51,612	0/0:25,0:25:72.19:0,72,841	0/0:35,0:35:99:0,99,1176	0/0:21,0:21:63.19:0,63,756	0/0:32,0:32:78.23:0,78,927	0/0:16,0:16:48.15:0,48,576	1/1:1,28:29:84.28:1176,84,0	0/0:29,0:29:84.26:0,84,1007	0/0:22,0:22:63.19:0,63,756	0/0:29,0:29:81.25:0,81,972	0/0:24,0:24:69.20:0,69,817	0/0:40,0:40:99:0,117,1392	0/0:27,0:27:78.24:0,78,935	0/0:17,0:17:45.13:0,45,531	0/0:18,0:18:48.15:0,48,576	0/0:33,0:33:96.29:0,96,1151	0/0:23,0:23:63.18:0,63,745	1/1:4,16:20:48.16:672,48,0	1/1:3,31:34:99:1347,99,0	0/0:27,0:27:75.23:0,75,899	0/0:24,0:24:66.20:0,66,792	0/0:17,0:17:48.15:0,48,576	0/0:9,0:9:27.08:0,27,323
chr10	37986760	.	AGTGTGTGTGTGTGTGTGT	A	5419.17	PASS	AB=0.753;AC=26;AF=0.481;AN=54;BaseQRankSum=2.949;DP=669;FS=0.000;HRun=0;HaplotypeScore=278.0477;InbreedingCoeff=0.6081;MQ=57.55;MQ0=18;MQRankSum=-4.730;QD=17.20;ReadPosRankSum=0.761;VQSLOD=3.0298;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:37:24.45:0,24,417	1/1:2,4:6:3.01:146,3,0	./.	0/0:26,0:17:1.25:0,1,3	0/0:15,0:23:18.03:0,18,594	1/1:13,13:26:15.05:509,15,0	1/1:17,0:17:17.89:252,18,0	1/1:20,0:19:5.99:50,6,0	0/0:18,0:18:18.04:0,18,599	1/1:15,17:33:43.33:990,43,0	1/1:5,10:15:6.02:283,6,0	0/0:33,0:31:44.18:0,44,2647	0/0:29,0:28:51.16:0,51,2650	0/0:16,0:16:17.42:0,17,751	1/1:8,22:29:18.06:801,18,0	0/0:26,0:26:30.34:0,30,1602	0/0:26,0:26:30.57:0,31,1541	1/1:8,8:16:1.58:144,2,0	0/1:10,5:13:6.84:236,0,7	1/1:3,14:17:15.05:565,15,0	0/1:47,0:43:4.98:39,0,5	0/0:11,0:22:15.31:0,15,748	0/0:21,0:20:15.30:0,15,641	0/0:51,0:51:51.02:0,51,3785	0/1:10,9:19:2.47:371,0,2	0/1:7,0:24:99:245,0,174	1/1:9,12:20:4.26:585,4,0	1/1:4,1:5:9.37:204,9,0
chr10	37986791	.	G	GTGTA	2148.01	PASS	AB=0.851;AC=8;AF=0.143;AN=56;BaseQRankSum=-2.600;DP=631;FS=0.632;HRun=0;HaplotypeScore=155.7538;InbreedingCoeff=0.1238;MQ=51.89;MQ0=26;MQRankSum=1.385;QD=11.61;ReadPosRankSum=5.918;VQSLOD=2.6547;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:29.27:0,29,271	0/1:7,0:7:9.57:10,0,67	0/0:32,0:9:20.43:0,20,176	0/0:32,0:12:36.03:0,36,343	0/1:21,0:21:31.49:31,0,178	0/0:20,0:18:17.97:0,18,180	0/0:16,0:16:29.58:0,30,255	0/0:13,0:11:13.05:0,13,222	0/0:14,0:14:9.27:0,9,91	0/0:26,0:26:59.88:0,60,544	0/0:13,0:13:8.95:0,9,66	0/1:9,21:32:45.62:754,0,46	0/1:25,0:24:31.58:32,0,266	0/0:20,0:20:27.96:0,28,214	0/0:28,0:27:30.02:0,30,288	0/1:21,0:20:90.99:91,0,102	0/0:23,0:23:11.38:0,11,340	0/0:18,0:18:32.04:0,32,247	0/0:17,0:15:37.15:0,37,303	0/0:18,0:17:17.71:0,18,181	0/0:25,0:21:33.39:0,33,286	0/0:26,0:26:1.68:0,2,233	0/1:3,19:23:7.08:93,0,7	1/1:2,48:52:40.20:1277,40,0	0/0:12,0:13:19.22:0,19,159	0/0:26,0:26:55.35:0,55,429	0/0:21,0:20:30.19:0,30,263	0/0:10,0:9:23.95:0,24,207
chr10	37989079	.	GGTGT	G	1528.34	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.464;DP=648;FS=5.188;HRun=0;HaplotypeScore=111.4865;InbreedingCoeff=0.9096;MQ=70.93;MQ0=3;MQRankSum=-5.578;QD=23.88;ReadPosRankSum=1.949;VQSLOD=3.4241;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,105,2423	0/0:7,0:8:17.82:0,18,334	0/0:35,0:32:58.40:0,58,1217	0/0:35,0:27:54.14:0,54,1156	0/0:9,0:10:27.09:0,27,650	0/0:23,0:23:54.15:0,54,1212	0/0:30,0:33:71.78:0,72,1500	0/0:22,0:24:53.75:0,54,1123	0/0:19,0:19:39.13:0,39,965	0/0:30,0:31:59.14:0,59,1078	0/0:11,0:11:30.10:0,30,749	1/1:6,19:25:51.17:833,51,0	0/0:18,0:17:45.15:0,45,1049	0/0:18,0:20:44.92:0,45,1010	0/0:19,0:21:53.76:0,54,1223	0/0:15,0:15:45.12:0,45,1023	0/0:43,0:44:99:0,111,2443	0/0:24,0:23:54.11:0,54,1240	0/0:27,1:29:0.27:0,0,971	0/0:11,0:13:29.66:0,30,575	0/0:27,0:30:56.74:0,57,1174	0/0:13,0:13:30.10:0,30,721	1/1:4,11:15:27.09:458,27,0	1/1:8,16:24:24.08:379,24,0	0/0:25,0:25:57.16:0,57,1320	0/0:24,0:25:59.97:0,60,1289	0/0:16,0:19:47.47:0,47,996	0/0:9,0:10:20.84:0,21,374
chr10	37990130	.	G	GGTGT	1557.37	PASS	AB=0.930;AC=34;AF=0.680;AN=50;BaseQRankSum=0.999;DP=681;FS=3.363;HRun=0;HaplotypeScore=148.4473;InbreedingCoeff=0.4584;MQ=65.79;MQ0=10;MQRankSum=-2.593;QD=3.42;ReadPosRankSum=-1.727;VQSLOD=2.2890;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:34:15.01:0,15,140	1/1:8,0:8:12.50:225,12,0	./.	./.	1/1:22,0:22:5.95:68,6,0	0/0:20,0:23:17.95:0,18,191	0/0:27,0:27:21.12:0,21,291	1/1:24,0:23:8.89:59,9,0	1/1:25,0:25:5.71:111,6,0	1/1:27,0:27:24.91:337,25,0	1/1:9,0:10:2.74:12,3,0	0/0:19,0:25:6.01:0,6,56	1/1:26,0:26:6.02:100,6,0	1/1:33,0:31:6.02:80,6,0	0/1:19,9:31:70.06:70,0,80	1/1:32,0:31:8.58:151,9,0	1/1:26,0:26:7.15:123,7,0	1/1:11,6:19:5.88:140,6,0	1/1:14,0:14:6.01:56,6,0	0/1:26,0:25:16.03:16,0,74	1/1:38,0:54:2.74:12,3,0	0/1:24,0:23:0:0,0,0	0/0:11,0:16:6.01:0,6,56	0/0:18,0:21:3:0,3,28	1/1:12,5:18:6.02:138,6,0	0/1:14,0:13:0:0,0,0	1/1:13,0:21:3.47:14,3,0	./.
chr10	37990163	.	G	GTGTGTGTGTGTA	1975.28	PASS	AB=0.812;AC=14;AF=0.250;AN=56;BaseQRankSum=1.693;DP=649;FS=0.000;HRun=0;HaplotypeScore=190.6386;InbreedingCoeff=0.3479;MQ=52.56;MQ0=13;MQRankSum=-0.329;QD=8.37;ReadPosRankSum=1.558;VQSLOD=2.4596;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:37:65.92:0,66,848	0/1:9,0:9:16.06:55,0,16	0/0:23,0:14:36.03:0,36,337	0/0:17,0:8:20.39:0,20,182	1/1:8,0:22:2.78:120,3,0	0/0:23,0:23:41.97:0,42,575	0/0:24,0:24:51.45:0,51,874	0/0:23,0:21:29.22:0,29,232	1/1:25,0:27:11.18:341,11,0	0/1:19,0:19:92.08:92,0,127	0/0:9,0:9:8.95:0,9,99	0/0:27,0:26:29.97:0,30,366	0/1:10,9:22:23.98:360,0,24	1/1:25,0:23:6.45:131,6,0	0/0:29,0:29:35.39:0,35,458	1/1:33,0:33:32.68:471,33,0	0/1:11,11:28:32.62:556,0,33	0/1:19,0:19:10.46:10,0,180	0/0:12,0:9:15.09:0,15,123	0/0:18,0:17:20.87:0,21,219	0/0:51,0:50:53.68:0,54,441	0/1:14,0:29:3.05:3,0,39	0/0:18,0:18:17.92:0,18,265	0/0:28,0:29:45.29:0,45,472	0/0:21,0:21:4.86:0,5,130	0/0:23,0:23:54.10:0,54,555	0/0:24,0:24:30.24:0,30,259	0/0:4,0:4:8.87:0,9,61
chr10	37990165	.	G	GTGTGTGTGTA	1181.14	PASS	AB=0.958;AC=9;AF=0.161;AN=56;BaseQRankSum=5.729;DP=647;FS=1.851;HRun=0;HaplotypeScore=177.5023;InbreedingCoeff=-0.0166;MQ=53.90;MQ0=12;MQRankSum=-2.865;QD=6.22;ReadPosRankSum=4.101;VQSLOD=2.7697;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:36:68.92:0,69,806	0/1:9,0:9:16.09:55,0,16	0/0:22,0:13:39.06:0,39,383	0/0:18,0:9:24.59:0,25,231	1/1:21,0:21:2.62:123,3,0	0/0:22,0:22:41.98:0,42,547	0/0:24,0:24:51.44:0,51,818	0/0:22,0:20:29.84:0,30,232	0/1:27,0:27:99:100,0,198	0/1:20,0:19:99:100,0,127	0/0:9,0:9:8.95:0,9,86	0/0:26,0:25:32.95:0,33,365	0/1:22,0:22:43.93:259,0,44	0/0:25,0:23:20.33:0,20,143	0/0:30,0:30:32.04:0,32,418	0/1:20,13:33:99:271,0,143	0/1:27,0:27:74.15:403,0,74	0/0:19,0:19:27.94:0,28,222	0/0:11,0:9:15.09:0,15,123	0/0:17,0:16:23.87:0,24,243	0/0:51,0:50:56.23:0,56,452	0/1:30,0:29:3.39:3,0,39	0/0:19,0:19:17.98:0,18,242	0/0:31,0:31:43.14:0,43,374	0/0:21,0:21:1.49:0,1,124	0/0:24,0:24:53.71:0,54,546	0/0:25,0:25:30.48:0,30,248	0/0:4,0:4:8.95:0,9,67
chr10	37991444	.	C	CA	2658.78	PASS	AB=0.877;AC=30;AF=0.536;AN=56;BaseQRankSum=-5.641;DP=578;FS=5.383;HRun=14;HaplotypeScore=94.1552;InbreedingCoeff=0.6684;MQ=75.83;MQ0=1;MQRankSum=1.665;QD=7.62;ReadPosRankSum=-4.045;VQSLOD=1.8652;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:15,5:46:23.96:209,24,0	1/1:4,9:14:7.57:179,8,0	0/0:20,0:16:11.32:0,11,78	0/0:29,0:25:9.15:0,9,100	0/0:27,0:27:51.46:0,51,327	1/1:2,6:10:11.68:81,12,0	0/1:7,9:18:11.38:152,0,11	1/1:12,4:30:41.36:242,41,0	0/0:14,0:14:8.67:0,9,57	1/1:8,16:24:28.68:363,29,0	1/1:4,8:12:3.40:136,3,0	0/0:4,0:22:31.68:0,32,90	0/1:16,3:19:2.94:3,0,111	0/1:18,0:18:46.56:47,0,86	1/1:5,14:20:23.83:196,24,0	0/1:14,0:14:5.80:6,0,79	0/0:16,4:20:14.93:0,15,222	1/1:2,12:15:23.84:199,24,0	1/1:6,13:20:42.12:339,42,0	1/1:9,16:26:25.23:215,25,0	1/1:17,3:20:8.55:178,9,0	0/0:21,1:23:25.36:0,25,159	0/0:2,0:16:18.08:0,18,52	0/0:5,0:20:24.42:0,24,70	1/1:5,15:20:5.61:167,6,0	0/0:2,0:23:32.58:0,33,93	1/1:7,14:21:17.99:155,18,0	0/0:1,0:14:26.13:0,26,75
chr10	37991742	.	GGAGGTC	G	3532.54	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=10.552;DP=724;FS=3.539;HRun=0;HaplotypeScore=146.3328;InbreedingCoeff=1.0000;MQ=75.20;MQ0=0;MQRankSum=-11.144;QD=76.79;ReadPosRankSum=4.059;VQSLOD=4.8960;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,114,3917	0/0:18,0:18:54.19:0,54,2014	0/0:38,0:38:99:0,114,3913	0/0:28,0:28:81.19:0,81,2623	0/0:32,0:32:96.32:0,96,3433	0/0:29,0:28:87.30:0,87,3188	0/0:17,0:17:51.16:0,51,1731	0/0:33,0:33:99:0,99,3648	0/0:25,0:25:75.24:0,75,2695	0/0:24,0:24:69.24:0,69,2484	0/0:17,0:17:51.18:0,51,1751	0/0:24,0:24:69.24:0,69,2595	0/0:32,0:32:96.33:0,96,3442	0/0:28,0:28:84.29:0,84,3082	0/0:24,0:24:72.24:0,72,2585	0/0:23,0:23:69.20:0,69,2356	0/0:18,0:18:54.19:0,54,2001	0/0:16,0:16:48.16:0,48,1806	0/0:24,0:24:72.25:0,72,2498	0/0:24,0:24:72.25:0,72,2588	0/0:27,0:27:81.28:0,81,2985	0/0:33,0:33:93.31:0,93,3391	0/0:28,0:28:84.29:0,84,2979	0/0:30,0:30:90.31:0,90,3307	0/0:18,0:18:54.18:0,54,1857	1/1:0,29:29:87.30:2227,87,0	0/0:30,0:30:90.31:0,90,3272	1/1:0,17:17:51.18:1306,51,0
chr10	37992278	.	TC	T	5369.60	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=12.075;DP=644;FS=11.739;HRun=2;HaplotypeScore=63.2358;InbreedingCoeff=0.9997;MQ=86.26;MQ0=0;MQRankSum=-2.477;QD=35.33;ReadPosRankSum=2.085;VQSLOD=4.6666;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,55:55:99:1985,153,0	0/0:11,0:11:33.11:0,33,483	0/0:20,0:20:57.16:0,57,769	0/0:25,0:25:69.20:0,69,981	0/0:21,0:21:57.18:0,57,835	0/0:22,0:22:63.21:0,63,944	0/0:20,0:20:57.18:0,57,835	0/0:33,0:33:99:0,99,1452	0/0:30,0:30:84.28:0,84,1259	0/0:18,0:18:48.15:0,48,700	0/0:18,0:18:54.18:0,54,809	1/1:1,23:24:63.20:818,63,0	0/0:25,0:25:69.21:0,69,994	0/0:20,0:20:60.20:0,60,897	0/0:20,0:20:60.20:0,60,899	0/0:28,0:28:81.27:0,81,1213	0/0:29,0:29:87.28:0,87,1283	0/0:15,0:15:45.11:0,45,649	0/0:13,0:13:39.13:0,39,585	0/0:20,0:20:57.19:0,57,852	0/0:37,0:37:99:0,108,1593	0/0:18,0:18:54.18:0,54,808	1/1:1,17:18:51.16:657,51,0	1/1:0,28:28:72.23:935,72,0	0/0:19,0:19:57.19:0,57,854	1/1:1,16:17:48.16:623,48,0	0/0:30,0:30:90.30:0,90,1349	1/1:0,10:10:27.09:350,27,0
chr10	37992835	.	GATCCCATT	G	3854.89	PASS	AC=12;AF=0.231;AN=52;BaseQRankSum=10.200;DP=548;FS=10.237;HRun=0;HaplotypeScore=131.8806;InbreedingCoeff=0.9679;MQ=47.02;MQ0=16;MQRankSum=-9.400;QD=50.06;ReadPosRankSum=1.944;VQSLOD=2.8529;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,16:17:14.91:606,15,0	0/0:13,0:13:39.13:0,39,1615	./.	./.	0/0:14,0:13:27.09:0,27,1206	0/0:21,0:21:45.15:0,45,1977	0/0:29,0:26:69.11:0,69,2611	0/0:28,0:26:78.22:0,78,2994	0/0:13,0:13:36.12:0,36,1624	0/0:24,0:23:66.23:0,66,2861	0/0:17,0:15:33.11:0,33,1413	1/1:0,21:18:36.12:1054,36,0	0/0:20,0:20:39.60:0,40,1724	0/0:19,0:19:45.15:0,45,1905	0/0:31,0:30:72.23:0,72,2952	0/0:28,0:28:60.06:0,60,2490	0/0:45,0:45:99:0,102,4088	0/0:30,0:26:63.20:0,63,2738	0/0:15,0:12:36.12:0,36,1305	0/0:26,0:24:60.21:0,60,2622	0/0:36,0:30:75.17:0,75,3269	0/0:11,0:10:24.08:0,24,1086	1/1:2,9:8:15.05:439,15,0	1/1:0,6:4:9.03:263,9,0	0/0:20,0:20:57.19:0,57,2316	1/1:3,15:16:42.14:1230,42,0	0/0:31,0:31:87.30:0,87,3898	1/1:0,3:3:9.03:263,9,0
chr10	37992911	.	TAACCACTAAGCA	T	5106	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=10.510;DP=561;FS=1.232;HRun=0;HaplotypeScore=185.1342;InbreedingCoeff=0.9875;MQ=64.14;MQ0=2;MQRankSum=-10.657;QD=75.09;ReadPosRankSum=1.841;VQSLOD=4.8459;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,18:17:24.08:906,24,0	0/0:8,0:8:24.08:0,24,1352	0/0:18,0:16:45.14:0,45,2144	0/0:23,0:22:66.23:0,66,3305	0/0:27,0:27:81.28:0,81,4812	0/0:22,0:22:63.22:0,63,3858	0/0:36,0:36:99:0,108,5675	0/0:36,0:36:99:0,108,5995	0/0:15,0:15:45.15:0,45,2601	0/0:18,0:18:54.19:0,54,3239	0/0:22,0:22:66.20:0,66,3564	1/1:0,11:10:24.08:940,24,0	0/0:24,0:24:69.24:0,69,4121	0/0:27,0:27:81.28:0,81,4692	0/0:27,0:27:75.26:0,75,4531	0/0:29,0:29:87.30:0,87,5099	0/0:31,0:31:90.31:0,90,4971	0/0:19,0:19:48.16:0,48,2890	0/0:11,0:11:33.11:0,33,1644	0/0:13,0:13:39.13:0,39,2132	0/0:36,0:36:99:0,102,5686	0/0:9,0:9:27.09:0,27,1691	1/1:0,12:9:24.08:923,24,0	1/1:1,6:5:11.37:455,11,0	0/0:13,0:13:39.13:0,39,2423	1/1:0,13:11:33.11:1297,33,0	0/0:29,0:29:84.29:0,84,4759	1/1:0,6:6:15.05:584,15,0
chr10	37994095	.	A	AC	26537.44	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-5.557;DP=714;FS=5.847;HRun=1;HaplotypeScore=74.9420;InbreedingCoeff=0.9998;MQ=76.66;MQ0=0;MQRankSum=-10.840;QD=39.67;ReadPosRankSum=6.884;VQSLOD=4.8009;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,46:48:99:1978,132,0	1/1:0,12:12:33.11:494,33,0	0/0:25,0:25:66.20:0,66,844	0/0:20,0:20:60.14:0,60,730	1/1:2,23:25:60.20:882,60,0	1/1:0,24:24:69.23:1034,69,0	1/1:1,33:34:87.25:1276,87,0	1/1:4,36:40:99:1617,108,0	1/1:0,27:27:66.22:989,66,0	1/1:2,23:25:72.16:1050,72,0	1/1:2,23:25:60.16:862,60,0	1/1:1,21:22:48.16:719,48,0	1/1:4,28:32:78.26:1166,78,0	1/1:0,29:29:78.26:1169,78,0	1/1:1,24:25:60.20:899,60,0	1/1:0,19:19:54.18:809,54,0	1/1:0,28:28:78.26:1169,78,0	1/1:1,23:24:66.22:989,66,0	1/1:0,25:24:75.25:1102,75,0	1/1:2,19:21:48.16:719,48,0	1/1:0,31:31:84.28:1259,84,0	1/1:0,20:20:57.19:853,57,0	1/1:0,14:14:36.09:515,36,0	1/1:0,29:29:84.28:1259,84,0	1/1:0,29:29:75.25:1123,75,0	1/1:1,22:23:63.21:942,63,0	1/1:1,20:21:60.20:898,60,0	1/1:0,17:17:51.17:764,51,0
chr10	37994324	.	G	GT	5435.12	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-4.144;DP=639;FS=2.145;HRun=1;HaplotypeScore=87.6869;InbreedingCoeff=0.9989;MQ=91.15;MQ0=0;MQRankSum=-2.257;QD=39.67;ReadPosRankSum=2.192;VQSLOD=5.4798;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,111,1411	0/0:7,0:7:21.07:0,21,270	0/0:23,0:23:60.17:0,60,715	0/0:29,0:29:75.05:0,75,902	1/1:3,15:18:39.13:584,39,0	0/0:21,0:21:63.20:0,63,817	0/0:29,0:29:84.22:0,84,1044	0/0:27,0:27:78.25:0,78,1001	1/1:0,15:15:42.14:628,42,0	0/0:31,0:31:87.28:0,87,1119	0/0:20,0:20:60.18:0,60,762	0/0:24,0:24:72.19:0,72,902	1/1:0,21:21:60.20:898,60,0	1/1:0,16:16:48.16:719,48,0	0/0:26,0:26:72.22:0,72,919	1/1:0,16:16:45.15:674,45,0	1/1:2,24:26:66.22:988,66,0	0/0:20,0:20:57.19:0,57,739	0/0:19,0:19:57.15:0,57,701	0/0:27,0:26:78.25:0,78,1011	0/0:38,0:38:99:0,108,1383	1/1:3,22:25:63.21:943,63,0	0/0:8,0:8:24.08:0,24,311	0/0:25,0:25:75.24:0,75,971	0/0:19,0:19:57.12:0,57,689	0/0:32,0:32:93.29:0,93,1192	0/0:24,0:24:69.22:0,69,893	0/0:16,0:16:45.11:0,45,543
chr10	37995015	.	AT	A	12178.73	PASS	AB=0.913;AC=54;AF=0.964;AN=56;BaseQRankSum=-4.044;DP=603;FS=7.501;HRun=10;HaplotypeScore=63.4663;InbreedingCoeff=0.1790;MQ=70.17;MQ0=0;MQRankSum=-2.405;QD=20.20;ReadPosRankSum=2.890;VQSLOD=5.8721;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,35:37:86.97:755,87,0	1/1:1,10:11:23.99:208,24,0	0/1:10,1:11:7.21:7,0,144	0/1:9,1:10:10.22:10,0,113	1/1:4,17:21:11.68:322,12,0	1/1:4,23:27:62.96:547,63,0	1/1:2,20:22:56.98:495,57,0	1/1:5,19:24:53.97:469,54,0	1/1:1,24:25:62.99:547,63,0	1/1:5,21:26:62.98:547,63,0	1/1:2,18:20:44.98:391,45,0	1/1:1,21:22:62.99:547,63,0	1/1:1,13:14:32.99:287,33,0	1/1:1,14:15:34.88:292,35,0	1/1:0,26:27:74.01:631,74,0	1/1:2,18:20:38.99:339,39,0	1/1:2,34:36:92.97:807,93,0	1/1:4,15:19:44.95:386,45,0	1/1:2,13:15:38.98:335,39,0	1/1:3,19:22:50.89:434,51,0	1/1:1,16:17:41.99:365,42,0	1/1:3,12:15:32.99:286,33,0	1/1:3,22:25:59.98:521,60,0	1/1:1,29:30:80.98:703,81,0	1/1:0,20:20:50.99:443,51,0	1/1:4,23:27:65.94:567,66,0	1/1:4,29:33:77.97:678,78,0	1/1:0,12:12:29.99:260,30,0
chr10	37995168	.	A	AG	11166.77	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-16.165;DP=649;FS=1.327;HRun=4;HaplotypeScore=57.9050;InbreedingCoeff=0.9987;MQ=83.39;MQ0=0;MQRankSum=-3.639;QD=34.90;ReadPosRankSum=4.436;VQSLOD=5.2169;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,46:50:99:1642,120,0	0/0:8,0:8:18.05:0,18,204	0/0:23,0:23:57.07:0,57,623	0/0:16,0:16:39.08:0,39,429	1/1:2,21:23:60.20:820,60,0	0/0:21,0:21:57.16:0,57,647	0/0:21,0:21:54.13:0,54,601	0/0:24,0:24:54.13:0,54,595	1/1:0,32:32:84.28:1149,84,0	0/0:32,0:32:87.25:0,87,986	0/0:15,0:15:45.13:0,45,510	1/1:1,23:24:66.22:903,66,0	1/1:0,15:15:36.12:492,36,0	1/1:0,26:26:66.22:903,66,0	0/0:21,0:21:54.15:0,54,612	1/1:0,11:11:30.10:410,30,0	1/1:3,33:36:87.29:1190,87,0	0/0:31,0:31:87.22:0,87,973	0/0:22,0:22:60.14:0,60,657	0/0:21,0:21:63.18:0,63,713	0/0:32,0:32:84.24:0,84,953	1/1:0,13:13:36.12:493,36,0	1/1:2,17:19:48.16:656,48,0	1/1:2,32:34:93.31:1272,93,0	0/0:16,0:16:48.14:0,48,544	1/1:5,20:25:29.16:786,29,0	0/0:26,0:26:75.19:0,75,832	1/1:1,11:12:33.11:451,33,0
chr10	37995369	.	T	TG	21760.17	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-0.783;DP=605;FS=3.750;HRun=3;HaplotypeScore=99.4246;InbreedingCoeff=0.9952;MQ=79.34;MQ0=0;MQRankSum=-8.607;QD=37.91;ReadPosRankSum=3.845;VQSLOD=4.5388;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,39:43:99:1680,117,0	1/1:0,8:8:21.07:301,21,0	0/0:9,0:9:21.07:0,21,260	0/0:22,0:22:47.91:0,48,670	1/1:1,15:16:36.12:517,36,0	1/1:0,19:19:51.17:734,51,0	1/1:1,28:29:75.25:1080,75,0	1/1:6,24:30:72.24:1032,72,0	1/1:1,16:17:51.17:725,51,0	1/1:1,17:18:51.17:729,51,0	1/1:1,13:14:39.13:549,39,0	1/1:0,23:23:60.20:864,60,0	1/1:0,19:19:54.18:775,54,0	1/1:0,28:28:69.23:991,69,0	1/1:3,20:23:51.17:735,51,0	1/1:0,10:10:30.10:432,30,0	1/1:3,27:30:75.25:1080,75,0	1/1:1,25:26:72.24:1037,72,0	1/1:1,25:26:69.20:955,69,0	1/1:0,25:25:72.24:1029,72,0	1/1:1,29:30:84.28:1208,84,0	1/1:1,13:14:30.10:431,30,0	1/1:0,16:16:45.15:647,45,0	1/1:1,18:19:51.17:734,51,0	1/1:0,15:15:42.14:604,42,0	1/1:3,24:27:75.24:1062,75,0	1/1:0,19:18:48.13:666,48,0	1/1:0,30:30:81.27:1163,81,0
chr10	37995644	.	TCATC	T	12818.41	PASS	AB=0.917;AC=51;AF=0.911;AN=56;BaseQRankSum=6.381;DP=451;FS=2.600;HRun=0;HaplotypeScore=249.5010;InbreedingCoeff=0.7483;MQ=52.61;MQ0=0;MQRankSum=-6.986;QD=30.23;ReadPosRankSum=4.581;VQSLOD=4.6124;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,4:10:27.04:378,27,0	1/1:5,0:5:8.99:107,9,0	0/0:16,0:15:44.99:0,45,728	0/0:11,0:10:29.95:0,30,405	1/1:14,5:19:39.74:471,40,0	1/1:22,2:24:62.90:746,63,0	1/1:14,1:15:36:463,36,0	1/1:22,0:22:53.95:566,54,0	1/1:16,3:19:57.17:762,57,0	1/1:19,2:21:54.15:682,54,0	1/1:16,1:17:42.10:560,42,0	1/1:9,3:12:33.04:455,33,0	1/1:22,3:25:72:805,72,0	1/1:21,5:26:72.68:987,73,0	1/1:15,4:19:50.99:603,51,0	1/1:12,2:14:33.08:437,33,0	1/1:13,2:15:32.10:354,32,0	0/1:10,1:11:28.92:266,0,29	1/1:12,2:14:33.02:357,33,0	1/1:20,3:23:40.28:460,40,0	1/1:6,1:7:12.87:138,13,0	1/1:8,1:9:21.06:279,21,0	1/1:11,1:13:30.09:412,30,0	1/1:11,1:12:20.85:180,21,0	1/1:9,2:11:32.94:395,33,0	1/1:19,2:21:57.15:725,57,0	1/1:10,4:14:35.48:383,35,0	1/1:22,4:26:75.04:850,75,0
chr10	37995646	.	ATCCATCCC	A	23541.64	PASS	AB=0.667;AC=51;AF=0.911;AN=56;BaseQRankSum=6.007;DP=445;FS=2.594;HRun=0;HaplotypeScore=245.2650;InbreedingCoeff=0.7522;MQ=53.78;MQ0=0;MQRankSum=-7.082;QD=56.86;ReadPosRankSum=4.459;VQSLOD=4.3886;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,3:10:30.05:629,30,0	1/1:1,2:3:8.99:188,9,0	0/0:19,0:17:48.11:0,48,1351	0/0:12,0:10:29.95:0,30,555	1/1:9,10:19:51.16:1059,51,0	1/1:11,12:23:65.93:1357,66,0	1/1:7,7:14:36.02:837,36,0	1/1:14,7:21:53.95:851,54,0	1/1:8,11:19:57.18:1462,57,0	1/1:6,14:20:54.17:1316,54,0	1/1:7,9:16:42.11:990,42,0	1/1:7,5:12:33.05:841,33,0	1/1:16,9:25:72.02:1367,72,0	1/1:10,16:26:78.24:1897,78,0	1/1:12,7:19:54:1097,54,0	1/1:6,8:14:36.09:834,36,0	1/1:9,6:15:35.99:667,36,0	0/1:5,5:10:74.27:505,0,74	1/1:10,4:14:33.03:629,33,0	1/1:15,8:23:51.06:881,51,0	1/1:5,2:7:14.99:249,15,0	1/1:3,6:9:24.07:551,24,0	1/1:7,6:13:33.10:768,33,0	1/1:9,3:12:20.54:244,21,0	1/1:5,6:11:32.94:716,33,0	1/1:7,12:19:57.16:1350,57,0	1/1:10,4:14:36.02:745,36,0	1/1:15,11:26:75.06:1510,75,0
chr10	37995663	.	TCCCTCTTCCTTCCTTC	T	19392.47	PASS	AB=0.909;AC=51;AF=0.911;AN=56;BaseQRankSum=5.627;DP=401;FS=20.480;HRun=0;HaplotypeScore=325.1987;InbreedingCoeff=0.6428;MQ=34.29;MQ0=9;MQRankSum=-2.005;QD=52.41;ReadPosRankSum=2.939;VQSLOD=2.9570;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:21:43.89:447,44,0	1/1:3,0:3:9.03:171,9,0	0/0:22,0:13:33.07:0,33,1139	0/0:9,0:3:9.03:0,9,381	1/1:13,5:18:46.70:973,47,0	1/1:16,2:18:54.17:1037,54,0	1/1:13,0:13:30.58:430,31,0	1/1:16,0:16:35.03:454,35,0	1/1:19,3:22:63.20:1412,63,0	1/1:16,2:18:49.98:1057,50,0	1/1:12,1:13:36.10:580,36,0	1/1:9,3:12:33.11:817,33,0	1/1:15,3:18:53.77:1261,54,0	1/1:20,5:25:75.24:1619,75,0	1/1:11,4:15:42.13:943,42,0	1/1:10,2:12:33.11:793,33,0	1/1:13,0:13:1.39:419,1,0	0/1:9,1:10:27.22:526,0,27	1/1:10,2:12:32.98:635,33,0	1/1:11,3:14:38.96:802,39,0	1/1:7,0:6:11.54:167,12,0	1/1:10,1:11:21.07:401,21,0	1/1:10,1:10:30.10:589,30,0	1/1:9,1:10:11.35:104,11,0	1/1:9,2:11:27.06:612,27,0	1/1:15,2:17:48.16:1007,48,0	1/1:6,3:9:27.09:747,27,0	1/1:17,4:18:54.18:1391,54,0
chr10	37995677	.	TTC	T	1495.89	PASS	AB=0.856;AC=22;AF=0.393;AN=56;BaseQRankSum=3.942;DP=401;FS=0.923;HRun=0;HaplotypeScore=288.8069;InbreedingCoeff=-0.6396;MQ=31.70;MQ0=11;MQRankSum=-1.496;QD=4.66;ReadPosRankSum=-5.008;VQSLOD=1.9037;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:38.64:0,39,326	0/1:2,1:3:33.48:33,0,45	0/0:18,0:10:26.87:0,27,415	0/0:8,0:3:9.03:0,9,179	0/1:15,2:17:31.28:31,0,153	0/1:14,4:18:99:154,0,197	0/1:15,3:18:99:108,0,221	0/0:18,0:17:21.68:0,22,298	0/1:16,3:19:84.82:85,0,244	0/1:17,2:19:90.29:90,0,287	0/1:10,1:11:20.92:21,0,151	0/1:8,3:11:71.44:80,0,71	0/1:13,3:16:99:100,0,181	0/1:21,3:24:99:140,0,303	0/1:12,2:14:97.74:131,0,98	0/1:11,2:13:74.94:75,0,116	0/1:12,3:15:46.64:47,0,284	0/1:9,2:11:96.22:96,0,212	0/1:12,2:14:93.11:93,0,155	0/1:13,2:15:38.85:39,0,165	0/0:6,0:5:11.66:0,12,138	0/1:7,4:11:4.49:4,0,116	0/1:9,2:10:6.75:7,0,109	0/0:8,2:10:9.19:0,9,63	0/1:10,2:11:36.26:36,0,110	0/1:16,1:17:55.68:56,0,247	0/1:8,1:9:48.39:48,0,80	0/1:19,4:20:99:178,0,245
chr10	37995712	.	CTTTCTT	C	5727.83	PASS	AB=0.995;AC=34;AF=0.607;AN=56;BaseQRankSum=0.548;DP=504;FS=7.230;HRun=0;HaplotypeScore=315.1227;InbreedingCoeff=-0.3702;MQ=47.17;MQ0=9;MQRankSum=-0.800;QD=12.08;ReadPosRankSum=-3.212;VQSLOD=2.3642;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:23,8:32:37.67:552,38,0	1/1:5,0:5:8.10:77,8,0	0/0:16,0:9:16.10:0,16,271	0/0:13,0:10:12.18:0,12,142	0/1:22,0:22:48.76:242,0,49	0/1:20,0:20:33.57:229,0,34	0/1:22,0:22:35.95:181,0,36	1/1:24,0:23:20.94:146,21,0	0/1:18,0:19:33.24:365,0,33	0/1:17,0:17:19.73:247,0,20	0/1:13,0:13:17.10:50,0,17	0/1:15,0:15:30.06:260,0,30	1/1:16,0:16:27.14:362,27,0	0/1:27,0:27:65.93:400,0,66	0/1:23,0:23:84.10:292,0,84	1/1:19,0:19:12.69:244,13,0	0/1:18,0:18:87.65:88,0,88	0/1:20,0:20:48.74:176,0,49	1/1:20,0:18:35.35:276,35,0	0/1:18,0:18:89.41:166,0,89	0/1:8,0:7:11.28:11,0,18	0/1:14,0:14:79.21:79,0,113	0/1:15,0:14:44.60:93,0,45	0/1:19,0:20:36.89:64,0,37	0/1:17,0:17:21.10:198,0,21	0/1:20,0:20:68.21:218,0,68	1/1:12,0:12:4.62:251,5,0	1/1:18,0:15:35.30:458,35,0
chr10	37995718	.	T	TC	14620.35	PASS	AB=0.692;AC=50;AF=0.893;AN=56;BaseQRankSum=-7.664;DP=527;FS=8.721;HRun=0;HaplotypeScore=228.6134;InbreedingCoeff=0.2752;MQ=51.20;MQ0=9;MQRankSum=1.126;QD=28.78;ReadPosRankSum=9.330;VQSLOD=2.7522;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:14,0:36:13.04:230,0,13	1/1:0,3:3:9.03:139,9,0	0/0:19,0:11:28.09:0,28,323	0/1:20,0:13:2.35:2,0,164	1/1:4,19:23:29.25:657,29,0	1/1:2,15:17:37.75:662,38,0	1/1:7,17:24:43.35:869,43,0	1/1:3,26:28:70.27:1137,70,0	1/1:3,19:23:14.85:702,15,0	0/1:4,10:14:3.55:413,0,4	1/1:3,11:14:9.01:396,9,0	1/1:2,12:14:17.72:462,18,0	1/1:5,11:16:0.16:441,0,0	1/1:4,22:26:23.01:896,23,0	1/1:2,22:24:47.48:932,47,0	1/1:5,16:21:16.34:625,16,0	1/1:3,18:21:30.77:701,31,0	1/1:6,16:22:13.07:644,13,0	1/1:5,12:15:22.18:534,22,0	1/1:4,14:18:7.18:552,7,0	1/1:2,5:6:9.03:141,9,0	1/1:3,12:15:28.53:506,29,0	1/1:3,11:13:20.68:483,21,0	1/1:7,16:22:20.04:561,20,0	1/1:4,14:18:33.82:589,34,0	1/1:6,14:20:8.46:600,8,0	0/1:3,10:13:7.57:348,0,8	1/1:6,10:13:4.84:399,5,0
chr10	37995946	.	TATCCCCCCC	T	3002.32	PASS	AB=0.964;AC=26;AF=0.464;AN=56;BaseQRankSum=8.364;DP=427;FS=70.335;HRun=0;HaplotypeScore=204.5472;InbreedingCoeff=-0.5440;MQ=55.16;MQ0=1;MQRankSum=-6.439;QD=9.04;ReadPosRankSum=7.557;VQSLOD=0.0251;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:27:50.94:51,0,123	0/1:8,1:9:52.25:94,0,52	0/0:27,0:18:41.85:0,42,1706	0/0:29,0:20:54.65:0,55,2119	0/0:11,1:12:5.48:0,5,75	0/1:18,0:17:69.46:69,0,155	0/1:9,0:9:36.30:61,0,36	0/1:24,0:24:42.72:605,0,43	0/1:13,3:16:11.15:304,0,11	0/1:10,0:10:89.57:114,0,90	0/0:17,0:17:0.54:0,1,60	0/1:14,1:14:31.41:31,0,99	0/1:13,1:14:25.81:247,0,26	0/1:17,0:16:50.86:243,0,51	0/1:28,0:27:80.30:80,0,171	0/1:19,0:19:33.45:209,0,33	1/1:17,0:17:21.49:185,21,0	0/1:4,1:5:30.84:89,0,31	0/1:7,0:6:42.81:43,0,61	0/1:12,0:12:41.53:89,0,42	0/0:9,0:9:8.37:0,8,62	1/1:10,0:10:0.39:67,0,0	0/1:14,1:15:30.51:49,0,31	0/1:19,0:19:14.12:39,0,14	0/1:16,0:15:32.92:33,0,69	0/1:14,0:14:29.93:350,0,30	0/1:8,0:8:57.16:66,0,57	1/1:1,0:1:3.01:37,3,0
chr10	37995948	.	TCCCCCC	T	9604.20	PASS	AB=1.000;AC=51;AF=0.911;AN=56;BaseQRankSum=4.633;DP=417;FS=2.597;HRun=8;HaplotypeScore=162.8774;InbreedingCoeff=0.6508;MQ=54.30;MQ0=5;MQRankSum=-7.459;QD=26.39;ReadPosRankSum=0.562;VQSLOD=1.1654;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:25,2:27:26.94:313,27,0	0/1:9,0:9:5.05:153,0,5	0/0:26,0:17:37.25:0,37,1165	0/0:27,0:18:48.14:0,48,1472	1/1:12,0:12:21.20:152,21,0	1/1:18,0:17:38.91:463,39,0	1/1:9,0:9:15.01:205,15,0	1/1:24,0:24:63.21:1149,63,0	1/1:12,3:15:42.01:595,42,0	1/1:9,0:8:23.95:323,24,0	1/1:17,1:17:29.48:268,29,0	1/1:10,3:12:30.01:420,30,0	1/1:10,3:14:27.09:499,27,0	1/1:14,1:15:39.04:575,39,0	1/1:27,0:27:65.34:700,65,0	1/1:9,9:19:48.08:834,48,0	1/1:15,2:17:23.99:338,24,0	1/1:5,0:5:6.02:107,6,0	1/1:6,0:4:8.41:81,8,0	1/1:12,0:12:29.97:356,30,0	1/1:8,0:8:5.93:40,6,0	1/1:9,1:10:18.02:228,18,0	1/1:12,2:14:23.99:300,24,0	1/1:19,0:19:8.68:127,9,0	1/1:16,0:15:38.83:417,39,0	1/1:13,0:13:36.07:611,36,0	1/1:8,0:8:24.02:309,24,0	1/1:1,0:1:3.01:42,3,0
chr10	37995949	.	CCCCCCCCTCT	C	15269.11	PASS	AB=0.563;AC=51;AF=0.911;AN=56;BaseQRankSum=3.472;DP=409;FS=3.640;HRun=0;HaplotypeScore=160.5597;InbreedingCoeff=0.6240;MQ=52.84;MQ0=6;MQRankSum=-7.284;QD=42.77;ReadPosRankSum=-0.409;VQSLOD=4.1859;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,16:25:26.90:384,27,0	0/1:2,7:9:17.69:269,0,18	0/0:26,0:17:28.91:0,29,1356	0/0:26,0:17:48.61:0,49,1798	1/1:2,10:12:21.50:272,21,0	1/1:9,7:15:36.56:711,37,0	1/1:1,8:9:15.05:341,15,0	1/1:3,21:24:63.21:1975,63,0	1/1:6,9:15:42.14:990,42,0	1/1:5,4:8:23.86:514,24,0	1/1:8,9:16:30.10:468,30,0	1/1:6,8:12:30.10:548,30,0	1/1:7,7:14:27.09:787,27,0	1/1:4,12:15:39.13:931,39,0	1/1:15,14:27:66.15:1142,66,0	1/1:11,8:19:48.12:977,48,0	1/1:3,14:17:24.08:586,24,0	1/1:2,3:5:6.02:178,6,0	1/1:2,4:4:9.03:175,9,0	1/1:3,8:11:30.10:615,30,0	1/1:2,5:7:5.98:60,6,0	1/1:3,6:10:18.06:401,18,0	1/1:6,8:14:24.08:475,24,0	1/1:4,15:18:8.99:219,9,0	1/1:7,9:15:37.37:658,37,0	1/1:3,10:13:33.58:1039,34,0	1/1:3,5:8:23.84:455,24,0	1/1:0,1:1:3.01:98,3,0
chr10	37995957	.	TCTC	T	1048.89	PASS	AB=0.992;AC=31;AF=0.574;AN=54;BaseQRankSum=5.901;DP=430;FS=1.958;HRun=0;HaplotypeScore=178.9533;InbreedingCoeff=-0.0643;MQ=48.57;MQ0=11;MQRankSum=-4.163;QD=3.42;ReadPosRankSum=4.168;VQSLOD=2.6705;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:25:8.91:0,9,56	0/1:11,0:11:28.06:28,0,54	0/0:21,0:12:36.05:0,36,677	0/0:23,0:15:33.67:0,34,734	1/1:11,0:11:0.47:1,0,0	0/1:19,0:18:17.67:18,0,67	0/1:12,0:11:15.50:15,0,74	0/1:27,0:25:88.59:242,0,89	1/1:17,0:16:11.49:121,11,0	0/1:15,0:14:26.68:27,0,312	0/0:14,0:13:0.67:0,1,30	0/1:14,0:12:8.77:9,0,42	1/1:12,1:13:10.47:150,10,0	1/1:13,1:13:18.33:124,18,0	0/0:30,2:30:3.35:0,3,319	0/1:17,1:18:74.96:80,0,75	1/1:18,0:18:13.59:95,14,0	0/1:7,0:7:29.08:29,0,48	1/1:6,0:4:6.92:32,7,0	0/1:17,0:17:10.69:11,0,129	./.	1/1:8,0:8:6.06:27,6,0	1/1:12,0:12:5.30:39,5,0	0/1:17,1:17:0.43:8,0,0	0/1:21,0:20:6.91:7,0,70	0/1:13,0:12:20.33:123,0,20	0/1:14,0:14:6.55:7,0,280	1/1:2,0:1:2.94:18,3,0
chr10	37995959	.	TC	T	80.50	PASS	AB=0.968;AC=19;AF=0.352;AN=54;BaseQRankSum=5.132;DP=475;FS=0.739;HRun=1;HaplotypeScore=194.7951;InbreedingCoeff=0.1536;MQ=46.16;MQ0=14;MQRankSum=-5.161;QD=0.38;ReadPosRankSum=2.775;VQSLOD=-0.7550;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:29:10.46:0,10,95	0/0:14,0:14:4.47:0,4,46	0/0:20,0:12:35.91:0,36,503	0/0:22,0:14:9.09:0,9,450	0/1:11,1:12:0:0,0,0	0/0:24,0:22:12.72:0,13,113	0/0:12,0:11:6.87:0,7,72	0/1:31,0:28:5.83:6,0,159	0/1:16,2:17:25.39:33,0,25	0/0:16,0:15:21.74:0,22,330	0/0:15,0:14:2.28:0,2,34	0/0:14,1:13:10.17:0,10,91	0/1:15,0:14:16.20:25,0,16	1/1:14,0:13:6.11:24,6,0	0/0:32,0:30:22.94:0,23,292	0/1:24,0:24:0.25:0,0,132	0/1:18,0:19:9.55:18,0,10	0/1:7,1:8:4.40:4,0,52	1/1:9,0:7:6.27:68,6,0	0/0:19,0:19:11.88:0,12,141	./.	1/1:11,0:10:0.72:2,1,0	1/1:13,0:13:1.88:6,2,0	0/1:20,0:19:11.65:19,0,12	0/0:21,0:20:7.57:0,8,73	0/1:18,0:17:9.05:9,0,64	0/0:14,0:14:17.25:0,17,239	1/1:2,0:1:1.55:4,2,0
chr10	37996164	.	T	TC	26561.91	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=9.260;DP=719;FS=1.249;HRun=1;HaplotypeScore=211.3919;InbreedingCoeff=0.9997;MQ=80.95;MQ0=0;MQRankSum=-10.843;QD=39.41;ReadPosRankSum=6.510;VQSLOD=3.8660;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,45:47:99:1753,117,0	1/1:1,14:15:36.09:513,36,0	0/0:21,0:21:60.17:0,60,743	0/0:24,0:24:66.21:0,66,857	1/1:2,24:26:66.22:972,66,0	1/1:2,14:16:42.14:629,42,0	1/1:3,28:31:84.24:1227,84,0	1/1:2,31:33:99:1443,99,0	1/1:1,40:41:99:1752,117,0	1/1:2,19:21:57.19:854,57,0	1/1:2,26:28:66.22:989,66,0	1/1:3,24:27:75.25:1122,75,0	1/1:1,24:24:69.23:1033,69,0	1/1:3,19:22:57.19:853,57,0	1/1:4,25:29:78.26:1167,78,0	1/1:0,34:34:96.33:1438,96,0	1/1:2,26:28:81.23:1189,81,0	1/1:2,18:20:60.20:898,60,0	1/1:2,21:23:66.20:961,66,0	1/1:1,23:24:54.14:784,54,0	1/1:2,28:30:78.23:1169,78,0	1/1:1,20:21:57.19:854,57,0	1/1:2,28:30:75.22:1099,75,0	1/1:1,30:31:75.25:1124,75,0	1/1:1,25:26:66.22:988,66,0	1/1:3,18:21:57.11:804,57,0	1/1:2,12:14:36.12:526,36,0	1/1:2,9:11:31.83:420,32,0
chr10	37996876	.	CCCT	C	13281.88	PASS	AB=1.000;AC=51;AF=0.911;AN=56;BaseQRankSum=-2.481;DP=592;FS=1.454;HRun=0;HaplotypeScore=112.0247;InbreedingCoeff=0.7445;MQ=69.30;MQ0=2;MQRankSum=-4.539;QD=23.76;ReadPosRankSum=6.064;VQSLOD=4.8776;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:29:71.85:123,0,72	1/1:0,9:9:12.01:194,12,0	0/0:22,0:18:23.78:0,24,601	0/0:11,0:9:20.84:0,21,281	1/1:21,0:21:43.09:256,43,0	1/1:4,25:29:54.04:823,54,0	1/1:8,21:29:76.02:1115,76,0	1/1:18,6:24:69.08:805,69,0	1/1:16,0:16:31.25:152,31,0	1/1:1,14:15:18.13:472,18,0	1/1:1,7:8:15.05:254,15,0	1/1:29,0:29:62.41:317,62,0	1/1:18,0:18:31.75:154,32,0	1/1:21,0:21:39.97:212,40,0	1/1:1,29:30:84.29:1428,84,0	1/1:19,3:21:46.03:345,46,0	1/1:40,0:39:62.49:312,62,0	1/1:2,25:27:63.05:1035,63,0	1/1:3,13:15:36.02:546,36,0	1/1:7,5:12:33.07:440,33,0	1/1:1,21:22:30.10:508,30,0	1/1:22,0:22:34.12:179,34,0	1/1:12,0:12:11.67:91,12,0	1/1:24,3:27:42.93:317,43,0	1/1:4,28:32:66.23:1113,66,0	1/1:3,17:20:54.15:867,54,0	1/1:1,22:23:54.18:915,54,0	1/1:0,6:6:18.06:306,18,0
chr10	37996877	.	CCT	C	12782.56	PASS	AB=0.952;AC=53;AF=0.946;AN=56;BaseQRankSum=-0.348;DP=571;FS=0.781;HRun=0;HaplotypeScore=102.3092;InbreedingCoeff=0.7387;MQ=69.99;MQ0=2;MQRankSum=-5.349;QD=22.87;ReadPosRankSum=5.808;VQSLOD=5.3692;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:22,3:25:23.86:299,24,0	1/1:9,0:9:11.97:99,12,0	0/1:19,1:16:3.64:4,0,450	0/0:12,0:10:22.86:0,23,273	1/1:2,19:21:44.99:604,45,0	1/1:26,2:28:53.83:463,54,0	1/1:28,0:28:80.93:702,81,0	1/1:23,1:24:69.01:617,69,0	1/1:0,16:16:33.11:504,33,0	1/1:15,0:15:17.82:282,18,0	1/1:7,0:7:15:136,15,0	1/1:3,25:28:66.22:997,66,0	1/1:0,17:17:36.12:535,36,0	1/1:3,18:21:42.10:613,42,0	1/1:29,1:30:83.99:745,84,0	1/1:3,19:21:48.11:655,48,0	1/1:5,32:36:65.79:920,66,0	1/1:25,1:26:63:575,63,0	1/1:14,2:15:35.93:320,36,0	1/1:11,1:12:33:287,33,0	1/1:21,1:22:29.94:275,30,0	1/1:1,18:19:36.12:546,36,0	1/1:2,10:12:19.85:280,20,0	1/1:5,20:25:45.12:628,45,0	1/1:29,2:31:65.98:579,66,0	1/1:19,0:19:53.99:479,54,0	1/1:22,1:23:54:482,54,0	1/1:6,0:6:18:159,18,0
chr10	37996878	.	CT	C	8702.21	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=2.401;DP=566;FS=1.813;HRun=1;HaplotypeScore=106.9213;InbreedingCoeff=0.8417;MQ=70.13;MQ0=2;MQRankSum=-4.862;QD=16.30;ReadPosRankSum=5.135;VQSLOD=5.2771;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:20,5:25:48.97:492,49,0	1/1:9,0:9:11.87:80,12,0	0/0:18,1:16:5.28:0,5,338	0/0:12,0:10:6.52:0,7,208	1/1:19,2:21:44.73:346,45,0	1/1:28,0:28:53.38:359,53,0	1/1:28,0:28:80.42:584,80,0	1/1:24,0:24:68.80:570,69,0	1/1:17,0:17:32.87:248,33,0	1/1:15,0:15:16.90:229,17,0	1/1:7,0:7:14.85:102,15,0	1/1:25,3:28:65.71:498,66,0	1/1:17,0:17:35.36:256,35,0	1/1:20,1:21:41.84:320,42,0	1/1:30,0:30:83.29:574,83,0	1/1:22,0:21:47.77:358,48,0	1/1:32,3:34:62.70:468,63,0	1/1:26,0:26:62.51:434,63,0	1/1:15,0:14:35.62:245,36,0	1/1:12,0:12:32.78:246,33,0	1/1:22,0:22:29.72:204,30,0	1/1:18,1:19:35.85:273,36,0	1/1:10,1:11:20.89:177,21,0	1/1:24,1:25:44.78:332,45,0	1/1:30,0:30:65.21:443,65,0	1/1:18,0:18:53.52:369,54,0	1/1:23,0:23:53.53:371,54,0	1/1:6,0:6:17.86:123,18,0
chr10	37997108	.	GA	G	2160.51	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=11.444;DP=725;FS=8.126;HRun=4;HaplotypeScore=95.4011;InbreedingCoeff=0.9996;MQ=80.58;MQ0=0;MQRankSum=-1.495;QD=31.31;ReadPosRankSum=3.204;VQSLOD=3.7162;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,135,1872	0/0:13,0:13:39.13:0,39,546	0/0:20,0:20:51.17:0,51,709	0/0:18,0:18:27.32:0,27,480	0/0:34,0:34:99:0,99,1348	0/0:14,0:14:36.12:0,36,503	0/0:33,0:33:96.32:0,96,1345	0/0:34,0:34:99:0,102,1368	0/0:28,0:28:84.25:0,84,1155	0/0:33,0:33:99:0,99,1382	0/0:19,0:19:54.18:0,54,755	1/1:1,27:28:75.23:900,75,0	0/0:22,0:22:63.21:0,63,882	0/0:28,0:28:78.26:0,78,1090	0/0:22,0:22:63.21:0,63,882	0/0:22,0:22:66.21:0,66,908	0/0:28,0:28:84.25:0,84,1141	0/0:25,0:25:72.20:0,72,986	0/0:17,0:17:51.16:0,51,699	0/0:38,0:38:96.32:0,96,1344	0/0:29,0:29:78.24:0,78,1074	0/0:37,0:37:99:0,108,1456	1/1:1,18:19:54.17:648,54,0	1/1:0,22:22:63.19:755,63,0	0/0:26,0:26:72.24:0,72,1008	0/0:27,0:27:75.25:0,75,1049	0/0:27,0:27:81.27:0,81,1134	0/0:15,0:15:39.10:0,39,523
chr10	37997351	.	T	TC	8584.53	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-15.457;DP=689;FS=2.354;HRun=0;HaplotypeScore=64.9282;InbreedingCoeff=0.9977;MQ=89.02;MQ0=0;MQRankSum=-7.611;QD=39.56;ReadPosRankSum=4.063;VQSLOD=5.4466;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,34:34:81.28:1295,81,0	0/0:13,0:13:39.13:0,39,542	0/0:26,0:26:75.13:0,75,933	0/0:24,0:24:54:0,54,774	1/1:3,12:15:30.10:480,30,0	0/0:15,0:15:45.13:0,45,596	0/0:39,0:39:99:0,117,1598	0/0:21,0:21:54.17:0,54,726	1/1:3,25:28:66.22:1055,66,0	0/0:21,0:21:54.17:0,54,727	0/0:19,0:19:54.18:0,54,754	0/0:31,0:31:90.30:0,90,1253	1/1:1,30:31:90.31:1438,90,0	1/1:0,22:22:51.17:815,51,0	0/0:41,0:41:99:0,120,1593	1/1:0,33:33:96.33:1535,96,0	1/1:0,35:35:87.30:1391,87,0	0/0:22,0:22:66.22:0,66,921	0/0:19,0:19:54.11:0,54,697	0/0:29,0:29:84.28:0,84,1174	0/0:35,0:35:99:0,99,1313	1/1:1,18:19:36.12:575,36,0	0/0:11,0:11:20.54:0,21,293	0/0:38,0:38:99:0,114,1594	0/0:15,0:15:36.12:0,36,502	0/0:19,0:19:42.14:0,42,582	0/0:27,0:27:78.25:0,78,1073	0/0:7,0:7:18.06:0,18,252
chr10	37997632	.	GAGGGGCTCCATGCTCA	G	2000.22	PASS	AB=0.585;AC=3;AF=0.054;AN=56;BaseQRankSum=6.981;DP=626;FS=3.210;HRun=0;HaplotypeScore=287.9500;InbreedingCoeff=0.5909;MQ=84.04;MQ0=0;MQRankSum=-5.534;QD=68.97;ReadPosRankSum=1.396;VQSLOD=3.0227;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,105,7437	0/0:6,0:6:18.06:0,18,1240	0/0:18,0:18:45.15:0,45,2291	0/0:22,0:22:57.19:0,57,3021	0/0:27,0:27:72.23:0,72,4896	0/0:28,0:28:81.28:0,81,5713	0/0:29,0:29:81.28:0,81,5709	0/0:26,0:26:78.26:0,78,5314	0/0:20,0:20:60.21:0,60,4425	0/0:20,0:20:57.20:0,57,3994	0/0:16,0:16:45.14:0,45,2767	0/0:16,0:16:48.16:0,48,3810	0/0:23,0:23:69.24:0,69,5433	0/0:22,0:22:66.23:0,66,5054	0/0:24,0:24:69.23:0,69,4746	0/0:35,0:35:99:0,105,7667	0/0:26,0:26:78.27:0,78,6003	0/0:20,0:20:57.20:0,57,4464	0/0:18,0:18:54.19:0,54,3578	0/0:20,0:20:57.17:0,57,3535	0/0:33,0:33:96.33:0,96,7256	0/0:23,0:23:63.19:0,63,4375	0/0:21,0:21:54.17:0,54,3876	0/0:13,0:13:39.13:0,39,2957	0/0:27,0:27:81.28:0,81,6255	0/1:7,17:24:99:1672,0,190	0/0:27,0:27:81.28:0,81,6298	1/1:0,5:5:9.03:426,9,0
chr10	37997947	.	TACAC	T	434.69	PASS	AB=0.706;AC=3;AF=0.054;AN=56;BaseQRankSum=0.896;DP=619;FS=0.000;HRun=0;HaplotypeScore=129.9744;InbreedingCoeff=0.4573;MQ=62.84;MQ0=19;MQRankSum=-2.916;QD=25.57;ReadPosRankSum=1.864;VQSLOD=3.2094;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:31:66.20:0,66,1415	0/0:8,0:8:24.08:0,24,513	0/0:74,0:31:79.07:0,79,1375	0/0:75,0:26:57.17:0,57,1347	0/0:9,0:9:15.05:0,15,372	0/0:16,0:16:33.57:0,34,670	0/0:32,0:31:63.20:0,63,1532	0/0:20,0:20:54.18:0,54,1303	0/0:17,0:17:42.11:0,42,887	0/0:13,0:13:36.11:0,36,840	0/0:11,0:11:30.10:0,30,749	0/0:19,0:19:53.16:0,53,1166	0/0:14,0:14:17.84:0,18,337	0/0:18,0:17:39.13:0,39,963	0/0:21,0:21:51.18:0,51,1246	0/0:18,0:18:48.12:0,48,908	0/0:23,0:23:60.19:0,60,1426	0/0:26,0:26:69.23:0,69,1726	0/0:10,0:10:24.08:0,24,615	0/0:11,0:11:24.08:0,24,598	0/0:30,0:30:60.20:0,60,1422	0/0:10,0:10:15.05:0,15,343	0/0:16,0:15:28.90:0,29,594	0/0:48,0:47:90.71:0,91,2110	0/0:18,0:18:48.16:0,48,1063	0/1:7,5:11:25:502,0,25	0/0:12,0:12:33.11:0,33,760	1/1:5,0:5:2.99:24,3,0
chr10	37997957	.	C	CCA	766.63	PASS	AB=0.912;AC=9;AF=0.180;AN=50;BaseQRankSum=-3.323;DP=632;FS=1.670;HRun=0;HaplotypeScore=125.2442;InbreedingCoeff=0.3444;MQ=52.98;MQ0=42;MQRankSum=2.008;QD=4.76;ReadPosRankSum=-0.302;VQSLOD=2.6788;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:25:0:0,0,0	0/0:8,0:8:11.32:0,11,133	0/0:67,0:24:3:0,3,34	./.	0/0:10,0:9:2.22:0,2,7	0/0:12,0:12:17.42:0,17,162	0/0:34,0:32:29.82:0,30,308	0/0:22,0:22:18.07:0,18,159	0/0:19,0:19:3.22:0,3,10	0/0:13,0:13:21.92:0,22,223	0/0:15,0:13:21.36:0,21,198	1/1:17,4:19:3.65:383,4,0	0/0:14,0:13:5.75:0,6,32	1/1:18,0:16:2.41:23,2,0	0/0:22,0:22:2.75:0,3,344	0/0:16,0:16:5.54:0,6,27	1/1:21,0:21:4.69:26,5,0	0/0:27,0:25:44.71:0,45,450	0/0:11,0:11:9.49:0,9,100	0/0:12,0:11:17.86:0,18,170	0/0:31,0:29:23.47:0,23,237	./.	0/1:17,1:15:28.90:67,0,29	0/1:43,11:51:98.02:387,0,98	0/0:17,0:19:33.15:0,33,284	0/0:16,0:12:2.68:0,3,11	0/0:15,0:16:30.13:0,30,277	./.
chr10	37997975	.	ACACACACACG	A	2171.59	PASS	AB=1.000;AC=28;AF=0.538;AN=52;BaseQRankSum=-3.012;DP=612;FS=1.492;HRun=0;HaplotypeScore=183.9228;InbreedingCoeff=0.0113;MQ=44.30;MQ0=52;MQRankSum=1.217;QD=4.84;ReadPosRankSum=-5.459;VQSLOD=1.1433;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:21:17.92:140,18,0	0/1:7,0:7:25.21:25,0,82	0/0:28,0:3:2.99:0,3,27	./.	1/1:16,1:14:20.84:161,21,0	0/1:19,0:18:99:131,0,130	0/1:37,0:35:3.15:3,0,331	0/1:24,0:21:62.77:63,0,78	1/1:20,1:19:25.02:282,25,0	0/1:20,0:20:49.95:50,0,287	0/0:15,0:13:26.49:0,26,175	0/1:19,0:17:15.76:16,0,794	1/1:2,8:9:6.02:128,6,0	1/1:15,0:11:20.91:208,21,0	0/1:25,0:24:37.90:38,0,446	1/1:18,1:18:35.99:512,36,0	1/1:27,0:21:33.40:282,33,0	0/0:28,0:26:8.30:0,8,491	0/0:14,0:13:12.40:0,12,214	0/0:15,0:14:19.25:0,19,219	0/1:36,0:33:22.76:23,0,192	1/1:6,9:15:5.99:50,6,0	0/1:22,0:18:29.12:29,0,238	0/1:51,0:48:24.78:25,0,1259	0/0:20,0:20:6.56:0,7,410	0/1:17,0:13:30.47:110,0,30	0/1:18,0:18:69.41:69,0,249	./.
chr10	37997983	.	ACG	A	2771.77	PASS	AB=0.976;AC=33;AF=0.611;AN=54;BaseQRankSum=0.716;DP=572;FS=16.521;HRun=0;HaplotypeScore=126.3406;InbreedingCoeff=-0.2779;MQ=45.43;MQ0=50;MQRankSum=1.905;QD=5.22;ReadPosRankSum=-4.102;VQSLOD=0.8255;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:18:23.86:182,24,0	0/0:7,0:7:4.40:0,4,33	0/0:12,0:1:3:0,3,27	0/0:20,0:1:2.84:0,3,14	1/1:20,0:17:29.82:233,30,0	0/1:18,0:17:22.24:133,0,22	0/1:20,15:33:29.28:29,0,120	0/1:22,0:19:74.73:77,0,75	1/1:22,0:20:31.10:236,31,0	0/1:21,0:21:81.33:119,0,81	0/1:14,0:12:25.28:25,0,71	0/1:20,0:18:58.71:59,0,123	1/1:10,0:9:5.88:37,6,0	1/1:15,0:11:19.71:143,20,0	0/1:26,0:25:88.03:123,0,88	1/1:18,0:17:38.80:296,39,0	1/1:30,0:24:48.32:357,48,0	0/1:30,0:28:99:129,0,171	0/1:15,0:15:67.37:71,0,67	0/1:14,0:13:19.23:19,0,35	0/1:29,0:26:33.84:34,0,71	1/1:15,0:15:11.99:100,12,0	0/1:21,0:18:29.63:30,0,63	0/1:48,0:45:65.01:65,0,259	0/1:19,0:19:54.13:110,0,54	1/1:23,0:17:33.24:208,33,0	0/1:18,0:18:37.93:120,0,38	./.
chr10	37997987	.	ACAC	A	1239.52	PASS	AB=0.869;AC=14;AF=0.259;AN=54;BaseQRankSum=6.262;DP=570;FS=57.305;HRun=0;HaplotypeScore=139.9215;InbreedingCoeff=-0.3624;MQ=45.91;MQ0=50;MQRankSum=0.143;QD=4.63;ReadPosRankSum=5.379;VQSLOD=0.3749;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:21:33.55:0,34,376	0/1:4,2:6:20.25:60,0,20	0/0:10,0:3:9.01:0,9,122	0/0:21,0:3:4.82:0,5,57	0/0:23,0:20:39.07:0,39,443	0/1:15,2:16:68.70:73,0,69	0/1:31,4:33:85.80:86,0,186	0/1:16,3:16:12.41:12,0,146	0/0:23,0:21:18.28:0,18,323	0/1:20,0:20:99:128,0,185	0/1:14,2:14:26.79:112,0,27	0/0:21,0:19:47.15:0,47,773	0/1:11,0:11:19.50:19,0,91	0/0:16,0:12:24.06:0,24,288	0/1:20,5:24:99:139,0,153	0/0:18,0:17:2.72:0,3,287	0/0:33,0:27:55.06:0,55,599	0/1:20,5:23:99:227,0,171	0/1:15,0:14:28.12:28,0,88	0/1:9,3:11:11.08:93,0,11	0/1:24,4:24:58.88:59,0,111	0/0:16,0:16:12.01:0,12,107	0/0:21,0:18:19.87:0,20,301	0/0:47,0:44:52.93:0,53,860	0/1:14,7:21:99:155,0,172	0/0:23,0:16:39.08:0,39,522	0/1:13,5:18:59.62:199,0,60	./.
chr10	37998009	.	A	ACG	873.29	PASS	AB=0.567;AC=7;AF=0.130;AN=54;BaseQRankSum=0.036;DP=552;FS=0.000;HRun=0;HaplotypeScore=132.9044;InbreedingCoeff=0.7450;MQ=56.42;MQ0=28;MQRankSum=-0.765;QD=8.91;ReadPosRankSum=1.926;VQSLOD=3.3626;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:18:33.20:0,33,260	0/0:7,0:7:17.89:0,18,135	0/0:24,0:16:40.92:0,41,438	0/0:28,0:19:50.85:0,51,480	0/0:21,0:18:36.38:0,36,291	0/0:18,0:18:41.79:0,42,322	0/0:38,0:37:61.27:0,61,415	0/0:21,0:19:33.85:0,34,404	0/0:14,0:12:12.11:0,12,89	0/0:24,0:24:62.45:0,62,514	0/0:15,0:14:26.20:0,26,183	1/1:11,5:16:23.41:311,23,0	0/0:11,0:11:11.94:0,12,93	0/0:10,0:8:17.90:0,18,138	0/0:19,0:19:35.78:0,36,267	0/0:16,0:15:32.19:0,32,260	0/0:28,0:23:41.80:0,42,293	0/0:23,0:22:43.52:0,44,306	0/0:12,0:12:30.22:0,30,208	0/0:16,0:15:35.52:0,36,257	0/0:25,0:24:41.77:0,42,322	0/0:18,0:18:13.75:0,14,119	0/1:4,12:16:24.63:50,0,25	1/1:10,38:45:9.08:501,9,0	0/0:21,0:21:48.84:0,49,379	1/1:17,0:13:5.48:146,5,0	0/0:19,0:19:53.63:0,54,393	./.
chr10	37998013	.	A	ACGCGCGCGCGCG	568.03	PASS	AC=2;AF=0.037;AN=54;BaseQRankSum=-0.120;DP=518;FS=9.561;HRun=0;HaplotypeScore=209.9662;InbreedingCoeff=0.8908;MQ=60.91;MQ0=24;MQRankSum=-2.893;QD=35.50;ReadPosRankSum=2.009;VQSLOD=2.3370;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:18:39.61:0,40,1330	0/0:7,0:7:18.06:0,18,606	0/0:26,0:18:54.18:0,54,1743	0/0:30,0:21:63.20:0,63,1787	0/0:22,0:19:42.14:0,42,1559	0/0:16,0:16:45.15:0,45,1490	0/0:30,0:30:63.11:0,63,1908	0/0:20,0:18:54.13:0,54,1698	0/0:14,0:12:19.77:0,20,454	0/0:23,0:23:59.18:0,59,2016	0/0:11,0:10:27.09:0,27,829	0/0:17,0:17:36.09:0,36,827	0/0:11,0:11:12.04:0,12,406	0/0:11,0:9:24.08:0,24,771	0/0:15,0:15:33.05:0,33,993	0/0:14,0:13:39.13:0,39,1252	0/0:28,0:23:40.61:0,41,1519	0/0:18,0:18:47.19:0,47,1360	0/0:11,0:11:30.02:0,30,880	0/0:15,0:14:39.11:0,39,1126	0/0:21,0:20:39.13:0,39,1421	0/0:19,0:19:21.06:0,21,684	0/0:15,0:14:8.96:0,9,221	0/0:44,0:44:35.37:0,35,869	0/0:20,0:20:51.16:0,51,1569	1/1:5,11:12:17.73:658,18,0	0/0:19,0:19:57.18:0,57,1710	./.
chr10	37998177	.	AAGAGAGAGAG	A	401.23	PASS	AC=2;AF=0.042;AN=48;BaseQRankSum=2.271;DP=423;FS=7.347;HRun=0;HaplotypeScore=132.4152;InbreedingCoeff=0.4121;MQ=61.18;MQ0=15;MQRankSum=-1.932;QD=11.15;ReadPosRankSum=-0.895;VQSLOD=2.0330;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:26,9:36:23.82:492,24,0	0/0:2,0:2:3.01:0,3,38	./.	./.	./.	0/0:12,0:12:12.04:0,12,371	0/0:13,0:13:12.04:0,12,437	0/0:23,0:21:15.99:0,16,177	0/0:17,0:16:15.05:0,15,613	0/0:10,0:10:15.05:0,15,611	0/0:13,0:13:6.02:0,6,199	0/0:15,0:16:14.94:0,15,523	0/0:9,0:14:15.52:0,16,648	0/0:11,0:11:12.04:0,12,513	0/0:12,0:12:12.04:0,12,486	0/0:6,0:5:12.04:0,12,426	0/0:21,0:20:39.13:0,39,1074	0/0:17,0:17:0.46:0,0,1002	0/0:8,0:8:4.57:0,5,153	0/0:15,0:14:4.97:0,5,283	0/0:19,0:18:14.88:0,15,492	0/0:15,0:16:15.05:0,15,676	0/0:14,0:14:15.05:0,15,571	0/0:30,0:30:27.09:0,27,1141	./.	0/0:11,0:11:16.61:0,17,582	0/0:8,0:8:6.02:0,6,231	0/0:11,0:10:15.05:0,15,626
chr10	37998295	.	A	AG	2739.12	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-5.302;DP=591;FS=3.061;HRun=0;HaplotypeScore=67.8951;InbreedingCoeff=0.9985;MQ=80.31;MQ0=0;MQRankSum=-1.397;QD=38.04;ReadPosRankSum=0.705;VQSLOD=3.9206;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,141,1934	0/0:11,0:11:33.07:0,33,407	0/0:20,0:20:53.96:0,54,612	0/0:13,0:13:25.58:0,26,288	0/0:18,0:18:54.15:0,54,734	0/0:14,0:14:42.14:0,42,587	0/0:19,0:19:57.19:0,57,797	0/0:27,0:26:78.22:0,78,1055	0/0:23,0:23:69.22:0,69,947	0/0:28,0:28:84.26:0,84,1130	0/0:8,0:8:24.07:0,24,320	1/1:0,27:27:65.95:1010,66,0	0/0:18,0:18:54.16:0,54,724	0/0:19,0:19:54.15:0,54,734	0/0:17,0:17:51.15:0,51,683	0/0:22,0:22:66.20:0,66,892	0/0:21,0:21:63.21:0,63,878	0/0:16,0:16:48.16:0,48,671	0/0:15,0:15:45.15:0,45,629	0/0:27,0:27:78.23:0,78,1043	0/0:30,0:30:90.26:0,90,1236	0/0:19,0:19:54.17:0,54,739	1/1:0,13:13:30.06:459,30,0	1/1:0,32:32:93.32:1413,93,0	0/0:19,0:19:54.16:0,54,710	0/0:24,0:24:72.08:0,72,930	0/0:28,0:28:81.23:0,81,1069	0/0:16,0:16:48.13:0,48,635
chr10	37998491	.	CACTT	C	10867.06	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=14.548;DP=727;FS=3.050;HRun=0;HaplotypeScore=129.1471;InbreedingCoeff=0.9971;MQ=80.43;MQ0=0;MQRankSum=-5.909;QD=46.84;ReadPosRankSum=4.645;VQSLOD=5.7291;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,41:45:99:2009,108,0	0/0:5,0:5:15.05:0,15,405	0/0:21,0:21:61.76:0,62,1541	0/0:25,0:25:70.79:0,71,1728	1/1:2,27:29:75.26:1402,75,0	0/0:25,0:25:75.26:0,75,2024	0/0:26,0:26:75.26:0,75,1972	0/0:42,0:42:99:0,123,3232	1/1:0,23:23:66.23:1253,66,0	0/0:27,0:27:81.27:0,81,2113	0/0:16,0:16:39.13:0,39,1018	0/0:37,0:37:99:0,105,2771	1/1:1,29:30:72.25:1367,72,0	1/1:1,21:22:63.22:1196,63,0	0/0:23,0:23:69.24:0,69,1863	1/1:2,26:28:63.22:1196,63,0	1/1:1,23:24:60.21:1136,60,0	0/0:26,0:26:72.25:0,72,1859	0/0:9,0:9:27.09:0,27,727	0/0:29,0:29:87.28:0,87,2253	0/0:27,0:27:75.24:0,75,1935	1/1:1,28:31:69.24:1308,69,0	0/0:33,0:33:99:0,99,2453	0/0:29,0:29:81.22:0,81,1995	0/0:20,0:20:54.16:0,54,1349	0/0:31,0:31:90.31:0,90,2391	0/0:33,0:33:96.32:0,96,2465	0/0:11,0:11:33.11:0,33,891
chr10	37999208	.	GC	G	9907.05	PASS	AC=24;AF=0.444;AN=54;BaseQRankSum=14.133;DP=597;FS=1.723;HRun=1;HaplotypeScore=68.1817;InbreedingCoeff=0.9997;MQ=81.62;MQ0=0;MQRankSum=-2.467;QD=39.63;ReadPosRankSum=-1.062;VQSLOD=5.0346;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,147,2319	./.	0/0:13,0:13:39.13:0,39,613	0/0:19,0:19:56.93:0,57,816	0/0:20,0:20:60.20:0,60,959	1/1:0,16:16:39.13:543,39,0	1/1:0,25:25:69.23:965,69,0	1/1:0,29:29:84.26:1156,84,0	0/0:23,0:23:69.24:0,69,1101	1/1:0,23:24:72.23:993,72,0	1/1:0,14:14:42.14:587,42,0	0/0:18,0:18:51.16:0,51,791	0/0:18,0:18:54.18:0,54,857	0/0:21,0:21:63.20:0,63,983	1/1:0,21:21:60.20:839,60,0	0/0:24,0:24:72.25:0,72,1151	0/0:44,0:44:99:0,129,2062	1/1:0,25:25:69.23:964,69,0	1/1:0,27:27:81.20:1091,81,0	1/1:0,17:17:51.17:713,51,0	1/1:0,15:15:39.13:545,39,0	0/0:16,0:16:48.16:0,48,767	0/0:22,0:22:63.21:0,63,1007	0/0:33,0:33:96.31:0,96,1509	1/1:0,14:14:42.14:587,42,0	0/0:19,0:19:57.19:0,57,890	1/1:0,23:23:66.22:923,66,0	0/0:8,0:8:24.08:0,24,374
chr10	37999754	.	C	CTG	9840.48	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=14.045;DP=535;FS=7.273;HRun=0;HaplotypeScore=119.6481;InbreedingCoeff=0.9884;MQ=90.59;MQ0=0;MQRankSum=-15.927;QD=47.54;ReadPosRankSum=-1.437;VQSLOD=5.0409;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:81.24:0,81,1194	1/1:3,4:7:9.03:173,9,0	0/0:29,0:29:79.89:0,80,1153	0/0:24,0:25:62.55:0,63,802	0/0:23,0:23:66.22:0,66,1011	1/1:1,12:13:33.11:635,33,0	1/1:4,19:23:63.17:1174,63,0	1/1:5,14:19:54.18:1019,54,0	0/0:21,0:21:60.20:0,60,919	1/1:7,16:23:66.21:1190,66,0	1/1:1,7:8:18.06:337,18,0	0/0:20,0:20:60.19:0,60,898	0/0:22,0:22:63.20:0,63,939	0/0:27,0:27:81.28:0,81,1238	1/1:2,22:24:66.16:1210,66,0	0/0:14,0:14:39.13:0,39,597	0/0:28,0:28:81.25:0,81,1194	1/1:2,10:12:30.10:578,30,0	1/1:6,8:14:30.07:542,30,0	1/1:2,14:16:33.11:635,33,0	1/1:3,12:15:33.03:574,33,0	0/0:18,0:18:51.17:0,51,780	0/0:20,0:20:54.18:0,54,824	0/0:23,0:22:66.22:0,66,1007	1/1:1,11:12:33.11:635,33,0	0/0:23,0:23:69.23:0,69,1037	1/1:4,16:20:63.11:1138,63,0	0/0:5,0:5:15.05:0,15,230
chr10	38000052	.	C	CGG	8896.67	PASS	AB=0.974;AC=27;AF=0.482;AN=56;BaseQRankSum=19.414;DP=663;FS=2.079;HRun=0;HaplotypeScore=128.5147;InbreedingCoeff=0.9244;MQ=82.45;MQ0=0;MQRankSum=-4.647;QD=30.36;ReadPosRankSum=0.404;VQSLOD=6.1701;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,163,2616	1/1:8,1:9:17.94:159,18,0	0/0:29,0:29:34.11:0,34,1073	0/0:25,0:25:73.63:0,74,1110	0/0:28,0:28:78.25:0,78,1246	1/1:12,7:19:56.96:739,57,0	1/1:16,9:25:71.87:948,72,0	1/1:3,19:22:66.02:620,66,0	0/0:27,0:27:81.28:0,81,1322	1/1:20,6:26:75.13:1164,75,0	1/1:4,2:6:14.90:197,15,0	0/0:24,0:24:69.24:0,69,1126	0/0:22,0:22:66.23:0,66,1077	0/0:15,0:15:45.15:0,45,734	1/1:18,5:23:68.97:966,69,0	0/0:37,0:36:99:0,111,1808	0/0:25,0:25:75.24:0,75,1195	1/1:16,7:23:66.19:957,66,0	1/1:5,2:7:21:274,21,0	1/1:15,2:17:26.90:324,27,0	1/1:28,9:37:85.21:1125,85,0	0/0:18,0:18:48.16:0,48,782	0/0:28,0:28:84.26:0,84,1322	0/0:24,0:24:72.23:0,72,1150	1/1:13,3:16:38.85:452,39,0	0/1:36,1:37:28.40:28,0,1547	1/1:19,7:25:71.20:943,71,0	0/0:13,0:13:39.13:0,39,636
chr10	38000054	.	TCC	T	6007.70	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=20.458;DP=669;FS=2.501;HRun=2;HaplotypeScore=140.0575;InbreedingCoeff=0.9876;MQ=81.48;MQ0=0;MQRankSum=-8.905;QD=23.38;ReadPosRankSum=1.063;VQSLOD=3.5597;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,159,3181	1/1:8,1:9:16.28:88,16,0	0/0:26,0:26:72.18:0,72,1334	0/0:26,0:26:61.23:0,61,1219	0/0:30,0:30:90.30:0,90,1776	1/1:12,7:19:53.63:511,54,0	1/1:16,9:25:66.66:660,67,0	1/1:3,19:22:57.74:355,58,0	0/0:27,0:27:81.28:0,81,1645	1/1:20,6:26:70.28:817,70,0	1/1:5,2:7:9.87:88,10,0	0/0:24,0:24:72.24:0,72,1421	0/0:23,0:23:69.22:0,69,1363	0/0:15,0:15:45.14:0,45,878	1/1:18,5:23:62.41:668,62,0	0/0:37,0:36:99:0,111,2218	0/0:26,0:26:75.20:0,75,1391	1/1:16,7:23:65.58:694,66,0	1/1:5,2:7:20.05:191,20,0	1/1:15,2:17:24.25:217,24,0	1/1:28,9:37:78.28:755,78,0	0/0:21,0:21:60.21:0,60,1184	0/0:28,0:28:84.26:0,84,1631	0/0:24,0:24:72.25:0,72,1463	1/1:13,3:16:35:297,35,0	0/0:38,1:39:13.57:0,14,2008	1/1:19,7:26:55.97:668,56,0	0/0:13,0:13:39.13:0,39,779
chr10	38000422	.	C	CAAGGCTGGATCCAGACACATGGTT	46459.04	PASS	AB=1.000;AC=27;AF=0.482;AN=56;BaseQRankSum=9.796;DP=567;FS=29.633;HRun=0;HaplotypeScore=328.4064;InbreedingCoeff=0.9197;MQ=69.62;MQ0=1;MQRankSum=-17.447;QD=190.41;ReadPosRankSum=-1.085;VQSLOD=3.7137;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:72.22:0,72,4227	1/1:2,8:10:27.09:2945,27,0	0/0:25,0:24:59.29:0,59,3190	0/0:18,0:17:12.13:0,12,1293	0/0:31,0:31:90.29:0,90,5631	1/1:14,5:22:54.18:5381,54,0	1/1:14,0:14:39.09:2637,39,0	1/1:34,0:34:99:6482,102,0	0/0:25,0:24:75.26:0,75,4052	1/1:8,2:13:36.11:2574,36,0	1/1:10,2:12:36.12:3735,36,0	0/0:26,0:26:78.24:0,78,4422	0/0:25,0:25:69.22:0,69,4154	0/0:23,0:23:69.24:0,69,4252	1/1:17,6:24:69.24:5925,69,0	0/0:20,0:19:60.21:0,60,3621	0/0:24,0:24:66.23:0,66,3997	1/1:7,3:10:27.06:2294,27,0	1/1:14,0:14:39.08:1888,39,0	1/1:13,4:20:48.16:3931,48,0	1/1:6,0:6:11.95:436,12,0	0/0:27,0:27:81.26:0,81,4600	0/0:17,0:17:51.18:0,51,3178	0/0:14,0:14:42.08:0,42,2120	1/1:7,5:15:36.12:3482,36,0	0/1:32,0:32:99:249,0,6044	1/1:10,4:18:42.14:4499,42,0	0/0:18,0:18:54.19:0,54,3179
chr10	38000500	.	GT	G	1389.87	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.248;DP=698;FS=2.851;HRun=3;HaplotypeScore=70.7720;InbreedingCoeff=0.9994;MQ=85.39;MQ0=0;MQRankSum=-1.828;QD=29.57;ReadPosRankSum=1.897;VQSLOD=3.3520;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,45:47:99:1485,120,0	0/0:11,0:11:30.10:0,30,432	0/0:19,0:19:53.25:0,53,698	0/0:28,0:28:68.30:0,68,930	0/0:22,0:22:57.19:0,57,821	0/0:27,0:27:75.17:0,75,1031	0/0:24,0:24:69.18:0,69,934	0/0:31,0:31:93.29:0,93,1286	0/0:25,0:25:75.24:0,75,1057	0/0:27,0:27:78.26:0,78,1115	0/0:21,0:21:63.21:0,63,905	0/0:22,0:22:66.20:0,66,910	0/0:31,0:31:93.25:0,93,1270	0/0:25,0:25:75.23:0,75,1056	0/0:23,0:23:66.11:0,66,888	0/0:21,0:21:63.21:0,63,907	0/0:20,0:20:60.15:0,60,807	0/0:18,0:18:54.16:0,54,757	0/0:15,0:15:42.11:0,42,581	0/0:40,0:40:99:0,114,1589	0/0:28,0:28:81.26:0,81,1148	0/0:33,0:33:99:0,99,1415	0/0:23,0:23:63.21:0,63,906	0/0:19,0:19:57.17:0,57,785	0/0:34,0:34:93.27:0,93,1312	0/0:17,0:17:51.13:0,51,666	0/0:30,0:30:84.27:0,84,1189	0/0:17,0:17:51.17:0,51,734
chr10	38000737	.	GGCT	G	10639.54	PASS	AB=0.725;AC=26;AF=0.464;AN=56;BaseQRankSum=11.395;DP=684;FS=9.762;HRun=0;HaplotypeScore=122.5837;InbreedingCoeff=0.8443;MQ=82.23;MQ0=0;MQRankSum=-6.635;QD=34.54;ReadPosRankSum=0.109;VQSLOD=5.3833;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,99,2108	1/1:1,5:6:9.03:150,9,0	0/0:20,0:20:51.17:0,51,1085	0/0:29,0:29:76.77:0,77,1505	0/0:18,0:18:51.16:0,51,1071	1/1:1,20:21:42.14:699,42,0	1/1:0,25:25:60.21:999,60,0	1/1:4,31:35:93.19:1397,93,0	0/0:32,0:32:96.33:0,96,2174	1/1:1,8:9:27.09:449,27,0	1/1:1,8:9:12.51:200,13,0	0/0:25,0:25:72.25:0,72,1632	0/0:38,0:38:99:0,114,2425	0/0:30,0:30:90.31:0,90,1981	1/1:0,35:35:69.24:1149,69,0	0/0:28,0:28:81.28:0,81,1836	0/0:25,0:25:69.22:0,69,1498	0/1:3,15:18:87.85:643,0,88	1/1:0,13:13:39.11:615,39,0	1/1:2,25:27:51.17:849,51,0	1/1:4,40:44:93.32:1549,93,0	0/0:20,0:20:57.18:0,57,1171	0/0:23,0:23:66.19:0,66,1357	0/0:40,0:40:99:0,105,2271	1/1:0,21:21:51.17:849,51,0	0/1:17,2:19:42.78:43,0,1058	1/1:2,24:26:63.22:1049,63,0	0/0:13,0:13:39.13:0,39,882
chr10	38001342	.	A	ACT	28862.07	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-8.376;DP=686;FS=0.705;HRun=0;HaplotypeScore=78.3728;InbreedingCoeff=0.9483;MQ=78.04;MQ0=6;MQRankSum=-8.446;QD=44.61;ReadPosRankSum=5.545;VQSLOD=6.5866;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,47:52:99:2283,129,0	1/1:2,12:14:42.10:703,42,0	0/0:16,0:15:39.12:0,39,512	0/0:23,0:23:41.16:0,41,614	1/1:1,16:17:48.16:851,48,0	1/1:1,19:20:54.19:958,54,0	1/1:3,21:24:59.94:1024,60,0	1/1:2,30:32:90.30:1562,90,0	1/1:1,25:27:72.25:1266,72,0	1/1:1,17:19:54.17:916,54,0	1/1:1,2:3:6.02:106,6,0	1/1:7,29:36:93.32:1625,93,0	1/1:5,23:29:63.22:1108,63,0	1/1:1,23:25:57.20:1011,57,0	1/1:1,25:24:66.20:1171,66,0	1/1:1,25:26:63.22:1118,63,0	1/1:2,32:34:90.31:1597,90,0	1/1:1,18:19:54.19:958,54,0	1/1:4,18:23:60.18:1024,60,0	1/1:1,21:23:63.22:1117,63,0	1/1:2,35:37:93.32:1649,93,0	1/1:0,19:21:51.17:905,51,0	1/1:3,12:15:36.12:610,36,0	1/1:3,30:33:75.26:1331,75,0	1/1:1,11:12:33.11:585,33,0	1/1:0,16:19:54.18:937,54,0	1/1:3,27:30:66.06:1171,66,0	1/1:1,25:26:72.25:1277,72,0
chr10	38001750	.	A	AT	6935.18	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-14.077;DP=608;FS=4.879;HRun=9;HaplotypeScore=55.8935;InbreedingCoeff=0.9916;MQ=68.36;MQ0=0;MQRankSum=-1.647;QD=26.17;ReadPosRankSum=-0.380;VQSLOD=5.3082;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:95.90:0,96,817	1/1:0,10:10:30.08:331,30,0	0/0:13,0:10:20.96:0,21,174	0/0:14,0:13:10.35:0,10,139	0/0:27,0:27:77.97:0,78,677	1/1:2,15:17:45.12:498,45,0	1/1:1,15:16:33.09:365,33,0	1/1:5,20:25:57.15:631,57,0	0/0:19,0:19:56.99:0,57,495	1/1:2,27:30:81.22:896,81,0	1/1:3,14:17:18.21:408,18,0	0/0:21,0:21:62.95:0,63,537	0/0:19,0:19:50.01:0,50,420	0/0:15,0:15:38.99:0,39,339	1/1:4,14:18:36.10:398,36,0	0/0:27,0:27:77.97:0,78,674	0/0:38,0:38:99:0,105,911	1/1:2,29:31:75.20:830,75,0	1/1:3,12:16:38.92:404,39,0	1/1:5,17:22:39.06:417,39,0	1/1:0,16:16:42.11:465,42,0	0/0:21,0:21:54.04:0,54,512	0/0:27,0:27:68.97:0,69,595	0/0:27,0:27:74.93:0,75,644	1/1:3,22:25:60.16:664,60,0	0/0:32,0:32:86.96:0,87,750	1/1:0,21:20:57.15:630,57,0	0/0:7,0:7:21:0,21,182
chr10	38005532	.	A	AG	684.64	PASS	AB=0.937;AC=22;AF=0.440;AN=50;BaseQRankSum=9.341;DP=333;FS=11.120;HRun=0;HaplotypeScore=160.2161;InbreedingCoeff=-0.3445;MQ=28.96;MQ0=25;MQRankSum=-2.182;QD=2.90;ReadPosRankSum=1.648;VQSLOD=2.6420;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:21,2:21:47.68:48,0,196	./.	./.	./.	0/1:11,0:11:8.02:22,0,8	0/1:10,1:10:13.02:45,0,13	0/1:15,0:12:25.37:25,0,33	0/0:12,0:9:21.82:0,22,263	0/1:6,1:7:8.71:41,0,9	0/1:18,2:17:38.13:38,0,245	0/1:9,2:10:18.11:18,0,19	0/1:7,0:5:1.54:33,0,2	0/1:10,1:9:37.44:89,0,37	1/1:14,1:15:1.22:111,1,0	0/0:7,0:6:5.90:0,6,39	0/1:8,0:8:20.14:40,0,20	0/1:8,1:8:10.71:26,0,11	0/1:8,1:7:17.39:17,0,92	0/0:8,0:6:17.99:0,18,221	0/1:6,1:7:12.59:38,0,13	0/0:9,0:7:3.38:0,3,21	1/1:12,0:11:2.84:9,3,0	0/1:9,0:7:2.48:32,0,2	0/1:15,0:13:11.21:11,0,23	1/1:9,2:10:4.19:32,4,0	0/1:23,2:23:99:150,0,452	0/0:7,0:6:2.38:0,2,149	0/0:3,0:3:8.85:0,9,76
chr10	38005534	.	GA	G	613.93	PASS	AB=0.975;AC=19;AF=0.380;AN=50;BaseQRankSum=10.544;DP=351;FS=7.977;HRun=3;HaplotypeScore=166.9131;InbreedingCoeff=-0.4294;MQ=28.60;MQ0=26;MQRankSum=-3.530;QD=2.68;ReadPosRankSum=1.968;VQSLOD=-0.1790;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:22:24.68:25,0,429	./.	./.	./.	0/1:13,0:13:20.36:20,0,26	0/0:11,0:10:0.38:0,0,120	0/0:14,1:12:8.91:0,9,87	0/0:12,1:10:25.55:0,26,322	0/1:7,0:7:6.91:31,0,7	0/1:22,1:20:33.81:34,0,418	0/1:10,1:10:27.50:28,0,47	0/1:7,0:5:11.47:11,0,25	0/1:10,1:9:61.51:62,0,126	0/1:14,1:15:24.89:143,0,25	0/0:7,0:6:5.92:0,6,67	0/1:9,0:9:29.89:66,0,30	0/1:10,0:9:38.19:43,0,38	0/1:9,0:7:3.49:3,0,137	0/0:7,0:6:18.06:0,18,269	0/1:7,0:7:25.12:26,0,25	0/0:9,0:7:3.01:0,3,33	0/1:12,0:11:1.64:4,0,2	0/1:10,1:9:39.60:57,0,40	0/1:13,1:12:11.64:12,0,61	1/1:12,0:11:11.05:55,11,0	0/1:27,0:25:99:117,0,551	0/1:7,0:6:21.22:21,0,183	0/0:3,0:3:9.01:0,9,104
chr10	38005535	.	A	AG	826.64	PASS	AB=0.929;AC=21;AF=0.420;AN=50;BaseQRankSum=9.892;DP=365;FS=5.250;HRun=1;HaplotypeScore=172.5771;InbreedingCoeff=-0.5040;MQ=28.69;MQ0=27;MQRankSum=-4.132;QD=3.46;ReadPosRankSum=2.916;VQSLOD=0.5044;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:22,2:22:19.79:20,0,399	./.	./.	./.	0/1:12,0:12:12.06:12,0,29	0/0:11,1:11:0.14:0,0,139	0/0:16,0:13:8.97:0,9,104	0/0:13,0:10:22.81:0,23,258	0/1:6,2:7:21.20:92,0,21	0/1:21,2:20:30.35:30,0,408	0/1:9,2:10:37.34:37,0,54	0/1:7,0:5:22.44:22,0,26	0/1:10,1:9:76.48:76,0,128	0/1:13,1:14:29.18:163,0,29	0/0:7,0:6:6:0,6,71	0/1:8,1:9:24.62:74,0,25	0/1:9,1:9:43.58:64,0,44	0/1:9,1:8:14.35:14,0,155	0/0:7,0:6:18.06:0,18,232	0/1:6,1:7:22.70:23,0,24	0/0:9,0:7:3.01:0,3,38	1/1:11,0:10:1.54:4,2,0	0/1:11,1:10:46.02:52,0,46	0/1:14,0:12:8.94:9,0,73	1/1:12,2:13:5.35:29,5,0	0/1:28,2:28:99:205,0,447	0/1:7,0:6:6.14:6,0,152	0/1:5,0:5:34.40:34,0,67
chr10	38005540	.	GA	G	656.89	PASS	AB=0.978;AC=21;AF=0.404;AN=52;BaseQRankSum=9.800;DP=394;FS=7.721;HRun=1;HaplotypeScore=175.3513;InbreedingCoeff=-0.5443;MQ=27.94;MQ0=29;MQRankSum=-3.465;QD=2.55;ReadPosRankSum=1.237;VQSLOD=-0.6502;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:23:34.06:34,0,350	./.	./.	0/0:43,0:2:2.98:0,3,21	0/1:12,2:14:32.23:32,0,43	0/1:12,0:11:21.08:21,0,170	0/0:15,0:12:8.92:0,9,101	0/0:13,0:10:27.02:0,27,345	0/1:8,0:6:58.65:60,0,59	0/1:20,3:21:72.96:73,0,502	0/1:12,1:12:36.91:37,0,52	0/1:6,0:5:14.49:14,0,63	0/1:12,0:10:99:127,0,141	0/1:15,0:15:49.53:112,0,50	0/0:7,0:6:5.92:0,6,73	0/1:9,0:9:15.11:15,0,48	0/1:12,0:11:17.08:17,0,123	0/1:10,0:8:10.55:11,0,166	0/0:8,0:6:18.06:0,18,277	0/1:9,0:9:24.80:25,0,39	0/0:10,0:8:1.88:0,2,36	1/1:5,7:11:3.63:11,4,0	0/1:12,1:11:0.98:1,0,102	0/1:13,0:11:1.09:1,0,92	0/1:12,0:11:25.45:39,0,25	0/1:28,1:27:99:140,0,600	0/1:6,0:5:17.78:18,0,140	0/1:5,0:5:10.21:10,0,72
chr10	38005543	.	AG	A	867.15	PASS	AB=0.963;AC=21;AF=0.404;AN=52;BaseQRankSum=10.826;DP=405;FS=8.133;HRun=3;HaplotypeScore=176.5998;InbreedingCoeff=-0.4525;MQ=27.54;MQ0=31;MQRankSum=-2.813;QD=3.48;ReadPosRankSum=0.177;VQSLOD=-0.3689;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:22:16.55:17,0,234	./.	./.	0/0:47,0:2:3.01:0,3,35	0/1:13,1:14:15.28:15,0,25	0/0:11,0:10:1.78:0,2,49	0/0:15,0:12:8.74:0,9,54	0/0:13,0:10:20.13:0,20,289	0/1:8,0:6:41.56:64,0,42	0/1:24,0:22:96.94:97,0,232	1/1:13,0:12:0.97:61,1,0	0/1:6,0:5:20.97:21,0,67	0/1:12,0:10:67.98:106,0,68	0/1:14,2:16:9.59:118,0,10	0/0:7,0:6:2.80:0,3,16	0/1:8,1:9:0.44:103,0,0	0/1:9,3:11:26.77:27,0,58	0/1:10,0:8:11.57:12,0,48	0/0:8,0:6:17.97:0,18,220	0/1:10,1:11:8.46:36,0,8	0/0:10,0:8:1.83:0,2,18	1/1:13,0:12:2.44:7,2,0	0/1:13,0:11:17.41:17,0,118	0/1:13,0:11:25.78:26,0,98	0/1:12,0:11:22.52:37,0,23	0/1:27,2:27:99:170,0,535	0/1:5,0:4:15.41:15,0,20	0/1:5,0:5:49.29:60,0,49
chr10	38005545	.	G	GA	852.24	PASS	AB=0.859;AC=22;AF=0.423;AN=52;BaseQRankSum=9.847;DP=406;FS=8.200;HRun=0;HaplotypeScore=176.5264;InbreedingCoeff=-0.4774;MQ=27.48;MQ0=32;MQRankSum=-1.543;QD=3.30;ReadPosRankSum=2.426;VQSLOD=2.8523;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:20,3:21:47.24:47,0,65	./.	./.	0/0:50,0:2:3.01:0,3,36	0/1:12,2:14:13.24:13,0,20	0/1:11,1:11:19.52:20,0,24	0/0:14,0:11:8.31:0,8,51	0/0:14,0:11:25.80:0,26,282	0/1:5,4:7:42.80:69,0,43	0/1:19,3:20:59.48:59,0,210	0/1:9,3:11:3.11:43,0,3	0/1:5,1:5:17.44:17,0,74	0/1:9,3:10:52.72:113,0,53	0/1:13,4:17:8.76:119,0,9	0/0:7,0:6:2.78:0,3,13	1/1:6,4:10:0.21:106,0,0	0/1:10,1:10:29.86:30,0,61	0/1:7,1:6:11.18:11,0,47	0/0:7,0:6:17.97:0,18,213	0/1:9,1:10:6.47:44,0,6	0/0:7,0:6:2.60:0,3,20	1/1:14,0:13:1.02:4,1,0	0/1:10,3:11:10.15:10,0,137	0/1:12,1:11:23.50:23,0,112	0/1:11,2:12:11.17:17,0,11	0/1:26,3:27:99:174,0,536	0/1:5,0:4:5.19:5,0,26	0/1:3,2:5:47.99:67,0,48
chr10	38005553	.	A	AG	1059.78	PASS	AB=0.952;AC=20;AF=0.370;AN=54;BaseQRankSum=10.033;DP=428;FS=10.588;HRun=1;HaplotypeScore=181.0616;InbreedingCoeff=-0.5019;MQ=29.75;MQ0=29;MQRankSum=-3.301;QD=4.45;ReadPosRankSum=0.921;VQSLOD=-0.5916;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:22,1:21:44.03:44,0,170	./.	0/0:57,0:5:8.86:0,9,90	0/0:67,0:9:17.89:0,18,228	0/0:14,0:14:8.12:0,8,95	0/1:11,1:12:14.66:15,0,141	0/0:13,0:10:9.37:0,9,106	0/0:15,0:12:27.03:0,27,300	0/1:8,2:8:42.80:43,0,43	0/1:19,0:16:48.96:49,0,330	0/1:10,0:10:26.26:85,0,26	0/1:7,0:6:19.31:19,0,69	0/1:12,1:11:99:122,0,113	0/1:19,0:19:45.69:236,0,46	0/0:7,0:6:2.99:0,3,38	0/1:12,1:13:19.66:158,0,20	0/1:13,0:12:24.30:24,0,206	0/1:7,0:5:14.97:15,0,101	0/0:10,0:8:14.72:0,15,189	0/1:8,0:8:47.76:48,0,52	0/0:5,0:5:2.78:0,3,38	1/1:10,0:10:5.33:27,5,0	0/1:14,1:13:22.05:22,0,173	0/1:14,0:12:19.40:19,0,105	0/1:13,0:12:49.32:49,0,64	0/1:22,1:21:99:159,0,331	0/1:5,0:4:27.74:28,0,65	0/1:2,2:4:29.90:50,0,30
chr10	38005562	.	GAA	G	1731.98	PASS	AB=0.955;AC=37;AF=0.685;AN=54;BaseQRankSum=-0.142;DP=429;FS=0.000;HRun=2;HaplotypeScore=168.3165;InbreedingCoeff=0.1752;MQ=32.00;MQ0=27;MQRankSum=-2.264;QD=6.61;ReadPosRankSum=0.986;VQSLOD=0.1092;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:21:33.85:219,34,0	./.	0/0:70,0:8:6.18:0,6,142	0/0:76,0:10:7.34:0,7,158	1/1:13,0:13:8.83:80,9,0	1/1:12,0:12:29.75:221,30,0	1/1:12,0:10:8.13:55,8,0	0/1:6,6:10:2.01:102,0,2	1/1:10,0:8:4.48:29,4,0	1/1:17,1:15:36.64:242,37,0	1/1:8,0:8:14.39:87,14,0	0/1:6,0:5:16.93:17,0,29	0/1:14,0:12:5.90:75,0,6	0/1:16,0:16:28.34:69,0,28	1/1:7,0:7:8.84:64,9,0	1/1:14,0:14:12.27:117,12,0	1/1:11,0:10:5.80:128,6,0	1/1:7,0:5:11.93:94,12,0	0/1:6,0:5:10.59:27,0,11	1/1:8,0:8:11.77:79,12,0	0/0:4,0:4:4.19:0,4,21	0/1:11,0:11:0.80:19,0,1	0/0:16,0:14:8.38:0,8,88	0/1:12,1:12:9.09:9,0,46	1/1:11,0:11:9.67:99,10,0	0/1:22,0:20:5.10:5,0,201	1/1:4,0:3:6.84:33,7,0	0/1:4,0:4:17.56:21,0,18
chr10	38005565	.	GA	G	40.41	PASS	AB=0.923;AC=8;AF=0.148;AN=54;BaseQRankSum=8.863;DP=409;FS=4.581;HRun=2;HaplotypeScore=162.4000;InbreedingCoeff=-0.2371;MQ=34.56;MQ0=25;MQRankSum=-1.272;QD=0.52;ReadPosRankSum=-0.105;VQSLOD=-0.7263;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,2:20:24.93:0,25,433	./.	0/0:73,0:9:17.73:0,18,239	0/0:77,0:10:21.07:0,21,314	0/0:12,0:12:22.17:0,22,200	0/0:11,1:12:14.01:0,14,301	0/0:10,0:8:9.03:0,9,118	0/0:9,0:8:12.04:0,12,160	0/1:8,2:8:21.37:21,0,31	0/0:16,2:15:1.29:0,1,396	0/1:8,0:8:19.33:19,0,75	0/0:4,1:5:4.70:0,5,118	0/1:13,2:13:20.90:21,0,131	0/1:15,0:15:1.56:2,0,212	0/0:6,0:6:14.92:0,15,144	0/1:13,0:13:29.47:29,0,164	0/0:8,0:8:19.23:0,19,267	0/0:6,0:4:2.75:0,3,107	0/0:4,0:3:5.64:0,6,80	0/0:7,0:7:0.14:0,0,81	0/0:3,0:3:4.20:0,4,22	0/0:11,0:11:16.92:0,17,131	0/0:14,0:13:22.32:0,22,282	0/0:14,0:13:4.60:0,5,147	0/1:11,0:11:18.14:18,0,115	0/0:19,1:18:4.10:0,4,414	0/1:2,0:2:21.53:22,0,31	0/1:2,2:4:31.25:31,0,76
chr10	38006322	.	G	GAGA	640.99	PASS	AB=0.936;AC=17;AF=0.386;AN=44;BaseQRankSum=4.569;DP=152;FS=0.000;HRun=0;HaplotypeScore=71.4630;InbreedingCoeff=-0.3730;MQ=70.13;MQ0=2;MQRankSum=-1.779;QD=5.99;ReadPosRankSum=-2.536;VQSLOD=1.3769;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,1:3:2.49:91,2,0	0/1:3,1:4:36.21:68,0,36	0/0:12,0:5:5.52:0,6,57	0/1:25,0:6:11.47:11,0,46	0/0:5,1:6:0.07:0,0,0	./.	1/1:4,0:4:0.94:2,1,0	0/0:2,0:2:2.97:0,3,20	0/1:6,0:6:46.98:47,0,168	0/1:5,1:6:62.92:63,0,69	0/1:3,0:3:0.28:0,0,0	0/1:7,0:7:32.57:33,0,137	./.	0/0:5,1:5:2.99:0,3,50	0/1:6,0:5:7.08:7,0,82	0/1:5,1:6:52.53:53,0,147	./.	./.	0/0:3,2:4:5.50:0,6,42	0/1:5,0:4:19.95:39,0,20	./.	0/0:4,0:4:1.41:0,1,5	0/1:5,0:5:15.03:44,0,15	0/0:2,0:3:0.47:0,0,1	0/1:4,1:5:13.04:13,0,89	0/1:8,1:8:98.90:99,0,146	./.	0/1:12,0:12:99:188,0,214
chr10	38006332	.	G	GA	48.05	PASS	AB=0.934;AC=14;AF=0.280;AN=50;BaseQRankSum=2.970;DP=190;FS=0.000;HRun=0;HaplotypeScore=85.9080;InbreedingCoeff=0.0694;MQ=68.92;MQ0=2;MQRankSum=-1.566;QD=0.43;ReadPosRankSum=-1.483;VQSLOD=1.4318;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,0:3:1.80:21,2,0	0/1:7,0:6:0.01:0,0,15	0/1:17,1:8:38.39:38,0,67	0/1:31,0:7:23.32:29,0,23	0/0:7,0:7:5.20:0,5,20	0/0:3,0:3:5.93:0,6,40	1/1:4,0:4:4.53:16,5,0	0/0:3,0:3:7.27:0,7,85	0/0:6,1:7:17.63:0,18,222	0/0:8,0:8:11.06:0,11,137	0/0:2,1:3:0:0,0,1	0/1:8,0:8:2.29:2,0,116	0/0:2,0:2:2.97:0,3,20	0/0:6,1:6:10.21:0,10,95	0/0:5,1:5:11.24:0,11,117	0/0:7,0:7:14.96:0,15,184	./.	0/0:2,0:2:3.01:0,3,41	0/0:5,0:4:5.99:0,6,84	0/1:5,0:5:6.89:7,0,36	./.	0/0:8,0:8:4.81:0,5,77	0/1:5,1:6:2.35:15,0,2	1/1:7,0:7:1.56:4,2,0	0/0:7,0:7:11.84:0,12,165	0/1:8,1:8:3.31:3,0,160	./.	0/1:9,4:13:35.13:35,0,218
chr10	38006337	.	GGA	G	109.86	PASS	AB=0.892;AC=14;AF=0.280;AN=50;BaseQRankSum=5.523;DP=200;FS=0.000;HRun=0;HaplotypeScore=88.0405;InbreedingCoeff=0.1095;MQ=71.94;MQ0=2;MQRankSum=-1.781;QD=1.46;ReadPosRankSum=0.161;VQSLOD=1.2434;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:2,0:3:0.69:25,1,0	1/1:7,0:6:3.18:21,3,0	0/0:18,0:8:4.30:0,4,78	0/0:36,0:10:9.70:0,10,64	0/1:7,1:8:9.31:11,0,9	0/0:3,0:3:2.68:0,3,60	0/1:5,0:5:16.16:16,0,36	0/0:3,0:2:6.02:0,6,116	0/0:7,1:8:12.75:0,13,317	0/0:8,0:8:9.81:0,10,169	0/1:2,1:3:0.33:1,0,0	0/0:7,1:8:12.30:0,12,187	0/0:2,0:2:2.94:0,3,18	0/0:6,1:6:10.72:0,11,118	0/0:5,1:5:4.79:0,5,119	0/0:7,0:7:15.03:0,15,267	./.	0/0:2,0:2:3.01:0,3,35	0/0:6,0:5:5.80:0,6,121	0/1:4,1:5:18.23:29,0,18	./.	0/1:9,0:9:0.07:0,0,100	1/1:4,1:6:6.09:42,6,0	0/1:7,0:7:0:0,0,0	0/0:7,0:7:15.82:0,16,293	0/1:6,1:8:15.81:16,0,246	./.	0/1:9,4:13:74.89:75,0,327
chr10	38006339	.	A	AG	641.64	PASS	AB=0.878;AC=20;AF=0.400;AN=50;BaseQRankSum=5.982;DP=202;FS=0.000;HRun=2;HaplotypeScore=93.2611;InbreedingCoeff=-0.1848;MQ=71.67;MQ0=2;MQRankSum=-1.989;QD=4.34;ReadPosRankSum=0.482;VQSLOD=0.3387;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,1:4:2.34:41,2,0	1/1:3,2:5:4.30:125,4,0	0/1:17,0:7:8.78:9,0,39	0/1:38,0:10:4.23:4,0,51	0/0:6,1:8:2.46:0,2,6	0/1:2,1:3:24.53:25,0,36	0/1:4,1:5:27.63:45,0,28	0/0:3,0:2:5.81:0,6,55	0/0:9,0:9:4.38:0,4,216	0/1:5,1:7:66.73:67,0,102	0/1:3,0:3:0.02:0,0,0	0/1:7,1:8:28.73:29,0,130	0/0:2,0:2:2.97:0,3,20	0/0:8,0:8:6.88:0,7,73	0/1:4,2:5:44.89:45,0,72	0/0:6,0:7:13.29:0,13,170	./.	0/0:2,0:2:3.01:0,3,35	0/0:3,0:3:6.02:0,6,84	0/1:5,1:6:22.73:23,0,36	./.	0/1:7,2:9:70.10:77,0,70	1/1:5,1:6:1.24:48,1,0	1/1:8,0:8:2.29:6,2,0	0/0:8,0:8:11.83:0,12,236	0/1:9,0:9:63.03:63,0,163	./.	0/1:11,2:13:99:173,0,217
chr10	38006346	.	ATAGG	A	685.91	PASS	AB=0.880;AC=22;AF=0.440;AN=50;BaseQRankSum=5.257;DP=206;FS=0.000;HRun=0;HaplotypeScore=95.8737;InbreedingCoeff=-0.3791;MQ=73.10;MQ0=2;MQRankSum=-1.960;QD=5.04;ReadPosRankSum=0.348;VQSLOD=1.8542;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:3,0:4:32.25:32,0,42	1/1:2,3:5:14.43:115,14,0	0/1:18,0:8:20.37:20,0,81	0/0:38,0:12:12.63:0,13,181	0/1:5,1:6:4.44:4,0,6	0/1:2,1:3:13.85:14,0,54	0/0:3,1:5:4.99:0,5,67	0/1:3,0:2:12.58:13,0,13	0/1:7,2:9:74.95:75,0,200	0/1:5,0:6:14.25:54,0,14	1/1:3,0:3:2.89:16,3,0	0/1:6,1:7:26.09:26,0,100	0/0:2,0:2:0.47:0,0,1	0/1:7,2:7:23.27:62,0,23	0/1:4,0:4:21.28:21,0,46	0/0:7,0:7:6.80:0,7,82	./.	0/0:2,0:2:3.01:0,3,33	0/1:3,0:3:5.79:6,0,70	1/1:5,1:6:5.27:51,5,0	./.	0/1:7,2:9:35.06:35,0,54	0/1:5,1:5:8.67:64,0,9	0/0:8,0:8:3.33:0,3,55	0/1:7,0:8:29.88:30,0,232	0/1:8,1:9:52.12:52,0,188	./.	0/1:12,1:13:99:138,0,149
chr10	38006350	.	G	GA	197.24	PASS	AB=0.938;AC=19;AF=0.380;AN=50;BaseQRankSum=6.932;DP=223;FS=0.000;HRun=0;HaplotypeScore=93.5787;InbreedingCoeff=-0.1427;MQ=74.49;MQ0=4;MQRankSum=-0.816;QD=1.38;ReadPosRankSum=1.103;VQSLOD=1.9400;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:4:0.46:0,0,41	1/1:6,0:6:6.23:56,6,0	0/0:23,0:7:8.95:0,9,66	0/1:44,0:15:6.51:7,0,101	1/1:5,1:7:3.93:13,4,0	0/1:3,0:3:21.90:22,0,36	0/0:7,0:7:1.22:0,1,50	0/0:4,0:3:2.86:0,3,42	0/0:9,0:9:5.11:0,5,235	0/1:6,1:7:13.49:13,0,80	1/1:3,0:3:2.96:20,3,0	0/1:7,0:7:4.56:5,0,122	0/0:3,0:2:0:0,0,0	0/1:8,1:7:3.49:3,0,50	0/1:3,2:4:19.90:20,0,71	0/1:6,1:7:2.64:3,0,108	./.	0/0:3,0:3:2.24:0,2,41	0/0:4,0:4:8.51:0,9,84	1/1:5,1:6:3.04:22,3,0	./.	0/1:9,0:9:11.74:12,0,90	0/1:6,0:5:36.59:42,0,37	0/0:8,0:8:2.39:0,2,41	0/0:8,0:8:15.83:0,16,255	0/1:9,0:9:20.89:21,0,213	./.	0/1:13,0:13:72.99:73,0,172
chr10	38006356	.	G	GA	276.70	PASS	AB=0.961;AC=16;AF=0.320;AN=50;BaseQRankSum=2.258;DP=218;FS=3.813;HRun=0;HaplotypeScore=89.8455;InbreedingCoeff=-0.2102;MQ=80.86;MQ0=7;MQRankSum=-1.705;QD=2.85;ReadPosRankSum=-0.830;VQSLOD=2.8888;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:4:2.27:0,2,26	0/1:5,1:6:8.70:53,0,9	0/0:24,0:7:9.78:0,10,82	0/0:49,0:21:16.49:0,16,194	0/0:6,0:6:2.50:0,3,21	0/0:3,0:3:5.16:0,5,25	0/1:7,0:7:18.84:24,0,19	1/1:4,0:3:2.96:19,3,0	0/1:9,0:9:8.78:9,0,105	0/1:5,0:5:22.47:22,0,23	0/0:2,1:3:2.45:0,2,15	0/1:5,0:5:10.36:48,0,10	0/0:2,0:1:0:0,0,0	1/1:9,0:7:6.26:31,6,0	0/1:4,0:4:9.48:9,0,17	0/0:5,0:5:8.41:0,8,46	./.	0/0:3,0:3:2.74:0,3,13	0/0:5,0:5:5.62:0,6,27	0/1:6,0:6:1.72:2,0,6	./.	0/1:8,0:8:7.91:8,0,68	0/1:5,0:5:8.49:8,0,17	0/0:8,0:7:0.84:0,1,15	0/1:7,0:7:22.47:22,0,97	0/1:7,2:8:30.44:46,0,30	./.	0/1:12,0:12:42.23:107,0,42
chr10	38006374	.	G	GA	233.14	PASS	AB=0.923;AC=23;AF=0.500;AN=46;BaseQRankSum=4.864;DP=207;FS=4.854;HRun=0;HaplotypeScore=91.4543;InbreedingCoeff=-0.0025;MQ=79.86;MQ0=11;MQRankSum=-1.363;QD=1.94;ReadPosRankSum=-2.968;VQSLOD=0.8766;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:5,0:4:2.52:3,0,39	1/1:3,2:6:9.32:40,9,0	0/1:38,1:9:15.74:16,0,24	0/0:54,1:28:9.88:0,10,251	1/1:5,0:4:2.92:17,3,0	0/0:1,0:2:3.90:0,4,43	0/1:8,0:8:8.14:8,0,46	./.	0/1:5,1:6:4.56:5,0,53	1/1:6,0:6:6.52:58,7,0	1/1:2,0:2:0.47:1,0,0	0/1:2,1:3:2.99:3,0,36	0/0:2,0:1:3.01:0,3,42	1/1:4,0:2:2.50:9,2,0	./.	./.	./.	0/0:3,0:3:6.02:0,6,73	0/0:5,0:4:6.02:0,6,84	1/1:2,0:2:1.40:4,1,0	0/0:7,0:2:2.99:0,3,24	0/1:7,0:7:17.23:17,0,37	0/1:5,0:5:25.62:26,0,47	0/0:4,0:3:3.01:0,3,42	0/1:8,0:8:33.66:34,0,106	0/1:7,1:7:50.41:50,0,82	./.	1/1:3,1:4:7.66:77,8,0
chr10	38006384	.	AGGT	A	98.74	PASS	AB=0.884;AC=19;AF=0.432;AN=44;BaseQRankSum=3.846;DP=186;FS=8.502;HRun=0;HaplotypeScore=84.3778;InbreedingCoeff=0.0323;MQ=83.71;MQ0=12;MQRankSum=-1.691;QD=1.47;ReadPosRankSum=2.642;VQSLOD=0.6419;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:2,1:3:3.70:4,0,14	1/1:4,1:5:4.82:54,5,0	0/0:40,0:8:2.43:0,2,209	0/0:56,0:27:43.44:0,43,661	1/1:3,0:2:0.47:1,0,0	0/0:2,0:2:2.94:0,3,18	0/1:6,1:6:4.05:4,0,12	0/0:2,0:1:0.47:0,0,1	0/1:4,1:5:1.21:1,0,79	0/1:4,2:6:1.25:35,0,1	./.	0/0:3,0:3:1.66:0,2,16	./.	1/1:3,0:2:2.98:22,3,0	./.	./.	./.	1/1:4,0:3:3.01:31,3,0	0/0:2,0:2:2.98:0,3,22	0/1:2,0:2:0:0,0,0	0/1:8,0:3:4.07:4,0,37	0/1:5,0:5:9.49:19,0,9	0/0:3,0:2:2.89:0,3,23	0/0:4,0:3:2.98:0,3,37	0/1:6,1:7:19.41:19,0,31	0/1:6,1:6:12.97:13,0,63	./.	1/1:2,0:2:0.89:2,1,0
chr10	38006385	.	GGTA	G	274.13	PASS	AB=0.762;AC=21;AF=0.525;AN=40;BaseQRankSum=3.004;DP=183;FS=20.209;HRun=0;HaplotypeScore=82.3549;InbreedingCoeff=0.2727;MQ=84.36;MQ0=12;MQRankSum=-2.482;QD=4.90;ReadPosRankSum=0.681;VQSLOD=0.4509;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:2,1:3:4.56:33,5,0	0/1:2,2:4:1.85:44,0,2	0/0:39,0:8:12.38:0,12,217	0/0:53,0:27:34.75:0,35,661	1/1:3,0:2:2.19:7,2,0	./.	0/1:7,0:6:4.95:36,0,5	0/0:2,0:1:0.47:0,0,1	0/0:5,0:5:2.58:0,3,55	1/1:3,2:6:13.37:75,13,0	./.	1/1:3,0:3:0.47:1,0,0	./.	1/1:3,0:2:2.04:6,2,0	./.	./.	./.	1/1:3,1:3:5.91:68,6,0	./.	0/1:1,1:2:0:0,0,0	0/0:8,0:3:0.88:0,1,48	1/1:3,2:5:8.05:67,8,0	0/0:3,0:2:0.64:0,1,6	0/0:4,0:3:2.92:0,3,19	0/1:4,3:7:2.39:28,0,2	0/1:5,2:6:21.80:22,0,29	./.	1/1:2,0:2:2.04:6,2,0
chr10	38006386	.	GT	G	293.62	PASS	AB=0.840;AC=24;AF=0.571;AN=42;BaseQRankSum=4.056;DP=163;FS=11.913;HRun=1;HaplotypeScore=81.9181;InbreedingCoeff=0.2355;MQ=88.99;MQ0=11;MQRankSum=-2.267;QD=5.44;ReadPosRankSum=0.508;VQSLOD=-0.7452;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,0:2:4.53:26,5,0	1/1:3,1:4:8.18:50,8,0	0/0:39,0:8:18.31:0,18,208	0/0:51,2:27:2.65:0,3,496	0/1:0,3:2:0:0,0,0	1/1:0,1:1:0.47:1,0,0	0/1:4,1:5:7.39:7,0,8	0/0:2,0:1:0.47:0,0,1	0/1:3,1:4:30.56:31,0,40	1/1:6,0:6:14.47:109,14,0	./.	1/1:1,1:2:0.72:2,1,0	./.	1/1:0,2:2:3.01:40,3,0	./.	./.	./.	1/1:4,0:3:3.56:13,4,0	./.	0/1:1,0:1:0:0,0,0	0/0:5,0:2:2.17:0,2,36	1/1:3,2:5:11.36:105,11,0	0/1:1,0:1:0:0,0,0	0/0:4,0:3:2.94:0,3,18	0/1:5,0:5:5.21:5,0,9	0/1:6,0:5:14.67:18,0,15	./.	0/1:1,1:2:0.10:0,0,0
chr10	38008070	.	A	AT	8978.51	PASS	AB=0.778;AC=45;AF=0.804;AN=56;BaseQRankSum=-11.495;DP=727;FS=2.128;HRun=12;HaplotypeScore=100.3894;InbreedingCoeff=0.3746;MQ=64.03;MQ0=2;MQRankSum=-0.436;QD=14.18;ReadPosRankSum=-2.314;VQSLOD=4.4321;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:56:79.25:0,79,232	1/1:2,10:12:5.60:213,6,0	0/1:20,1:16:14.74:15,0,133	0/0:9,0:9:12.98:0,13,75	1/1:10,20:31:15.81:431,16,0	1/1:9,15:25:38.90:364,39,0	1/1:5,23:29:40.98:537,41,0	1/1:14,17:35:54.68:491,55,0	1/1:6,12:18:30.03:286,30,0	1/1:8,22:31:66.34:604,66,0	1/1:10,17:27:42.22:519,42,0	0/1:20,3:24:25.79:26,0,316	0/1:7,27:34:21.42:460,0,21	1/1:4,10:14:35.98:326,36,0	1/1:4,20:28:64.63:544,65,0	1/1:4,15:21:23:372,23,0	1/1:11,12:25:30.34:405,30,0	1/1:12,29:41:15.41:635,15,0	1/1:5,7:13:4.97:197,5,0	1/1:9,23:34:43.05:523,43,0	1/1:4,11:15:8.14:241,8,0	1/1:5,18:24:22.94:338,23,0	0/0:25,1:27:11.61:0,12,253	0/1:31,4:35:24.24:24,0,498	0/1:8,17:26:20.87:281,0,21	1/1:6,22:29:59.08:585,59,0	1/1:4,15:22:13.80:254,14,0	1/1:7,9:17:35.70:310,36,0
chr10	38008128	.	G	GT	3165.14	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-10.326;DP=712;FS=5.307;HRun=5;HaplotypeScore=82.2463;InbreedingCoeff=0.9929;MQ=59.47;MQ0=2;MQRankSum=0.778;QD=33.32;ReadPosRankSum=2.571;VQSLOD=4.1906;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,123,1291	0/0:16,0:16:45.11:0,45,483	0/0:21,0:15:32.37:0,32,292	0/0:23,0:17:22.29:0,22,227	0/0:29,0:29:84.21:0,84,902	0/0:23,0:23:69.16:0,69,733	0/0:35,0:35:87.22:0,87,934	0/0:31,0:31:84.18:0,84,893	0/0:25,0:25:63.15:0,63,677	0/0:20,0:20:60.15:0,60,645	0/0:22,0:21:54.14:0,54,580	1/1:5,39:44:91.14:1533,91,0	0/0:24,0:24:63.16:0,63,675	0/0:11,0:11:33.08:0,33,355	0/0:33,0:33:90.22:0,90,967	0/0:24,0:24:63:0,63,667	0/0:24,0:24:72.18:0,72,771	0/0:40,0:40:99:0,99,1064	0/0:14,0:14:30.07:0,30,316	0/0:24,0:24:69.17:0,69,741	0/0:20,0:20:57.13:0,57,605	0/0:21,0:21:63.16:0,63,677	1/1:1,18:19:48.16:631,48,0	1/1:0,32:32:87.28:1145,87,0	0/0:24,0:24:66.14:0,66,700	0/0:25,0:25:63.16:0,63,677	0/0:28,0:27:78.20:0,78,837	0/0:9,0:9:15.03:0,15,161
chr10	38008748	.	A	AC	17513.81	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=10.529;DP=551;FS=0.000;HRun=0;HaplotypeScore=270.1245;InbreedingCoeff=0.9908;MQ=74.57;MQ0=0;MQRankSum=-10.941;QD=35.03;ReadPosRankSum=7.326;VQSLOD=3.1763;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,26:31:75.21:968,75,0	1/1:0,8:8:24.08:316,24,0	0/0:26,0:26:64.78:0,65,824	0/0:25,0:25:72.23:0,72,986	1/1:4,23:27:60.17:766,60,0	1/1:0,16:16:45.15:596,45,0	1/1:2,18:20:54.16:694,54,0	1/1:1,12:13:39.12:530,39,0	1/1:3,22:25:75.18:930,75,0	1/1:1,19:21:63.19:819,63,0	1/1:0,13:13:30.08:356,30,0	1/1:0,22:22:63.20:821,63,0	1/1:0,23:23:63.20:818,63,0	1/1:1,20:21:63.18:793,63,0	1/1:0,24:23:72.24:953,72,0	1/1:2,30:32:93.28:1186,93,0	1/1:2,7:9:24.05:296,24,0	1/1:0,12:12:27.09:358,27,0	1/1:1,14:15:45.14:603,45,0	1/1:0,26:26:69.22:880,69,0	1/1:2,6:8:18.06:243,18,0	1/1:6,32:38:99:1338,108,0	1/1:2,16:18:39.10:477,39,0	1/1:1,11:12:24.08:304,24,0	1/1:2,17:19:57.15:714,57,0	1/1:6,16:22:60.68:754,61,0	1/1:0,17:17:51.17:677,51,0	1/1:0,8:8:24.08:325,24,0
chr10	38008755	.	C	CA	24162.04	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=11.139;DP=655;FS=0.546;HRun=1;HaplotypeScore=309.1598;InbreedingCoeff=0.9961;MQ=70.56;MQ0=0;MQRankSum=-11.544;QD=40.14;ReadPosRankSum=5.925;VQSLOD=3.3550;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,27:34:99:1399,99,0	1/1:1,7:8:24.08:358,24,0	0/0:27,0:27:75.10:0,75,982	0/0:26,0:26:61.18:0,61,934	1/1:10,23:33:81.11:1102,81,0	1/1:1,16:17:51.17:746,51,0	1/1:3,18:21:63.21:924,63,0	1/1:12,12:23:69.19:989,69,0	1/1:5,21:26:75.24:1082,75,0	1/1:13,20:33:96.32:1427,96,0	1/1:12,12:24:71.98:893,72,0	1/1:4,22:26:69.23:1002,69,0	1/1:9,20:29:84.26:1189,84,0	1/1:4,24:28:75.06:1081,75,0	1/1:5,23:27:84.28:1246,84,0	1/1:4,30:34:99:1421,99,0	1/1:5,7:12:27.09:399,27,0	1/1:6,8:14:33.10:465,33,0	1/1:5,16:20:57.19:864,57,0	1/1:4,22:26:75.25:1070,75,0	1/1:2,8:10:24.08:327,24,0	1/1:2,33:35:99:1436,99,0	1/1:5,17:22:66.20:903,66,0	1/1:5,15:20:36.12:505,36,0	1/1:7,17:24:72.24:1048,72,0	1/1:6,18:24:72.23:1041,72,0	1/1:4,16:20:60.20:883,60,0	1/1:1,8:9:24.08:363,24,0
chr10	38009231	.	TG	T	19019.38	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-0.540;DP=602;FS=3.883;HRun=3;HaplotypeScore=110.9779;InbreedingCoeff=0.9975;MQ=79.25;MQ0=0;MQRankSum=-8.766;QD=33.31;ReadPosRankSum=5.338;VQSLOD=4.4169;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,42:42:99:1413,114,0	1/1:0,11:11:27.08:334,27,0	0/0:16,0:16:29.23:0,29,543	0/0:15,0:15:38.09:0,38,430	1/1:0,20:20:56.76:693,57,0	1/1:0,26:26:69.22:855,69,0	1/1:7,29:36:87.27:1075,87,0	1/1:0,25:25:72.20:875,72,0	1/1:0,18:18:51.16:631,51,0	1/1:1,34:35:96.22:1155,96,0	1/1:0,9:9:23.63:297,24,0	1/1:3,31:34:87.27:1079,87,0	1/1:2,21:23:60.04:743,60,0	1/1:2,19:21:57.18:707,57,0	1/1:0,18:18:54.17:669,54,0	1/1:1,18:19:45.14:558,45,0	1/1:0,26:26:75.24:930,75,0	1/1:1,20:21:57.18:707,57,0	1/1:1,13:14:39.08:455,39,0	1/1:0,16:16:42.13:517,42,0	1/1:1,16:17:48.15:595,48,0	1/1:0,13:13:30.09:365,30,0	1/1:0,12:12:33.10:408,33,0	1/1:0,25:25:72.23:892,72,0	1/1:0,19:19:54.17:669,54,0	1/1:0,25:25:74.57:874,75,0	1/1:0,30:30:78.01:966,78,0	1/1:0,16:16:45.14:558,45,0
chr10	38010035	.	CTCTCTGTGTGTGTGTGTGTGTGTGTGTG	C	3219.44	PASS	AB=0.957;AC=11;AF=0.212;AN=52;BaseQRankSum=4.565;DP=588;FS=1.779;HRun=0;HaplotypeScore=260.4996;InbreedingCoeff=0.1889;MQ=42.56;MQ0=21;MQRankSum=-3.930;QD=14.63;ReadPosRankSum=4.734;VQSLOD=2.4453;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:33:23.95:0,24,628	0/0:10,0:9:12.51:0,13,420	./.	0/0:14,0:7:12.71:0,13,158	0/1:24,0:23:87.39:87,0,176	0/0:21,0:20:18.02:0,18,779	0/0:24,0:19:15.94:0,16,357	0/0:19,0:17:43.96:0,44,897	1/1:30,0:32:14.94:1028,15,0	0/0:32,0:30:69.13:0,69,3086	0/0:12,0:9:6.02:0,6,96	0/1:29,0:26:99:146,0,464	0/1:22,0:22:23.69:819,0,24	1/1:21,0:20:9.03:476,9,0	0/1:20,0:20:12.24:308,0,12	0/1:26,0:25:18.95:177,0,19	0/1:13,10:21:0.67:198,0,1	0/0:9,0:9:9.03:0,9,354	0/0:17,0:16:40.95:0,41,1577	0/0:32,0:27:28.50:0,29,1126	0/0:25,0:22:12.04:0,12,400	./.	0/0:16,0:15:3.47:0,3,26	0/0:23,0:22:12.51:0,13,196	0/0:18,0:18:24.07:0,24,788	0/1:23,0:19:99:130,0,616	0/0:23,0:23:30.09:0,30,1151	0/0:7,0:6:6.02:0,6,82
chr10	38010037	.	CTCTGTGTGTGTGTGTGTGTGTGTGTGTG	C	3728.96	PASS	AB=1.000;AC=15;AF=0.288;AN=52;BaseQRankSum=2.487;DP=580;FS=5.000;HRun=0;HaplotypeScore=262.3118;InbreedingCoeff=0.5130;MQ=40.99;MQ0=22;MQRankSum=-2.305;QD=17.11;ReadPosRankSum=3.666;VQSLOD=1.6092;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:34:30.39:0,30,515	0/0:10,0:9:12.88:0,13,346	./.	0/0:12,0:5:6.01:0,6,66	0/1:25,0:24:99:118,0,178	0/0:21,0:20:18.04:0,18,813	0/0:24,0:19:15.89:0,16,317	0/0:19,0:17:42.70:0,43,796	1/1:7,24:30:14.51:1084,15,0	0/0:33,0:31:72.41:0,72,3088	0/0:12,0:9:5.99:0,6,48	0/1:29,0:26:99:167,0,266	1/1:4,18:22:1.06:891,1,0	1/1:2,20:21:9.03:512,9,0	1/1:18,1:19:20.95:390,21,0	1/1:6,19:24:3.01:201,3,0	1/1:23,0:21:4.95:234,5,0	0/0:11,0:11:15.03:0,15,583	0/0:17,0:16:39.86:0,40,1399	0/0:32,0:27:28.01:0,28,1066	0/0:25,0:22:14.98:0,15,406	./.	0/0:15,0:14:0.47:0,0,1	0/0:22,0:21:12.42:0,12,110	0/0:18,0:18:21.04:0,21,738	0/1:22,0:18:99:133,0,387	0/0:22,0:22:26.99:0,27,1042	0/0:4,0:3:5.91:0,6,69
chr10	38010039	.	CTGTGTGTGTGTGTGTGTGTG	C	2389.79	PASS	AB=0.797;AC=19;AF=0.396;AN=48;BaseQRankSum=6.719;DP=567;FS=12.622;HRun=0;HaplotypeScore=213.7654;InbreedingCoeff=0.4120;MQ=40.70;MQ0=22;MQRankSum=-3.927;QD=8.75;ReadPosRankSum=1.676;VQSLOD=1.8137;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:24,13:35:0:0,0,0	0/0:10,0:9:3.48:0,3,168	./.	./.	0/1:18,0:24:30.83:31,0,94	0/0:17,0:19:9.53:0,10,373	0/0:19,0:18:6.49:0,6,139	0/0:18,0:16:14.92:0,15,301	1/1:31,0:30:14.16:703,14,0	0/0:29,0:31:17.83:0,18,1338	./.	0/1:24,0:25:19.29:136,0,19	1/1:22,0:22:12.04:558,12,0	1/1:22,0:21:6.49:280,6,0	1/1:17,0:18:3.01:140,3,0	1/1:25,0:24:3.01:148,3,0	1/1:22,0:21:0.48:129,0,0	0/0:11,0:11:12.04:0,12,398	0/0:14,0:13:18.06:0,18,658	0/0:28,0:25:18.51:0,19,418	0/0:26,0:24:8.05:0,8,148	./.	0/1:12,0:15:0:0,0,0	0/0:19,0:20:0.25:0,0,1	0/0:15,0:16:12.04:0,12,271	0/1:16,0:17:23.39:407,0,23	0/0:20,0:22:16.78:0,17,443	1/1:2,0:2:1.55:4,2,0
chr10	38010309	.	T	TC	16197.77	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=10.705;DP=573;FS=2.636;HRun=2;HaplotypeScore=237.7350;InbreedingCoeff=0.9913;MQ=83.34;MQ0=0;MQRankSum=-11.585;QD=31.27;ReadPosRankSum=6.868;VQSLOD=3.8430;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:8,20:28:56.73:773,57,0	1/1:5,10:15:30.09:405,30,0	0/0:34,0:34:99:0,99,1228	0/0:21,0:21:52.54:0,53,634	1/1:4,29:33:72.14:1000,72,0	1/1:6,11:17:36.11:487,36,0	1/1:4,11:15:34:461,34,0	1/1:15,19:34:69.22:962,69,0	1/1:2,15:17:45.15:627,45,0	1/1:10,19:29:60.20:848,60,0	1/1:5,18:23:57.15:768,57,0	1/1:1,13:14:39.13:546,39,0	1/1:2,12:14:36.08:479,36,0	1/1:3,23:26:66.16:870,66,0	1/1:0,16:16:48.16:670,48,0	1/1:4,14:18:51.17:714,51,0	1/1:7,8:15:24.04:313,24,0	1/1:2,11:13:30.10:424,30,0	1/1:3,24:27:72.21:986,72,0	1/1:4,22:26:63.20:863,63,0	1/1:8,6:14:18.06:252,18,0	1/1:8,16:23:42.14:588,42,0	1/1:5,14:19:36.12:503,36,0	1/1:1,12:13:26.65:365,27,0	1/1:6,14:20:45.15:630,45,0	1/1:5,15:20:48.16:657,48,0	1/1:3,17:20:51.17:714,51,0	1/1:1,7:8:21.07:295,21,0
chr10	38010313	.	A	AT	12583.71	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=7.315;DP=477;FS=1.776;HRun=1;HaplotypeScore=231.5206;InbreedingCoeff=0.9721;MQ=92.47;MQ0=0;MQRankSum=-10.178;QD=29.96;ReadPosRankSum=10.372;VQSLOD=3.1170;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,19:19:40.10:498,40,0	1/1:1,10:11:30.07:351,30,0	0/0:35,0:35:99:0,105,1442	0/0:22,0:22:61.60:0,62,836	1/1:0,30:30:51.01:642,51,0	1/1:1,11:12:34.57:369,35,0	1/1:0,11:11:33.10:392,33,0	1/1:4,19:23:60.17:742,60,0	1/1:1,14:15:45.07:514,45,0	1/1:4,19:23:57.18:706,57,0	1/1:4,16:20:47.19:522,47,0	1/1:1,12:13:39.04:439,39,0	1/1:1,12:13:35.63:434,36,0	1/1:0,23:23:63.18:743,63,0	1/1:1,15:16:44.48:523,44,0	1/1:1,16:17:47.98:556,48,0	1/1:1,8:9:21.06:250,21,0	1/1:0,11:11:33.10:406,33,0	1/1:0,19:19:57.18:719,57,0	1/1:2,21:23:61.48:701,61,0	1/1:1,6:7:10.93:123,11,0	1/1:2,16:17:33.98:376,34,0	1/1:2,14:16:27.82:356,28,0	1/1:1,11:12:26.81:318,27,0	1/1:1,15:16:41.34:484,41,0	1/1:1,15:16:48.12:564,48,0	1/1:0,20:20:57.03:655,57,0	1/1:1,6:7:17.72:203,18,0
chr10	38012347	.	TA	T	3928.38	PASS	AB=0.626;AC=27;AF=0.482;AN=56;BaseQRankSum=-5.029;DP=522;FS=34.506;HRun=12;HaplotypeScore=198.2726;InbreedingCoeff=0.7541;MQ=77.64;MQ0=4;MQRankSum=1.242;QD=14.29;ReadPosRankSum=2.491;VQSLOD=1.0238;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,12:24:47.11:313,47,0	1/1:7,5:11:3.26:126,3,0	0/0:43,0:27:2.07:0,2,174	0/0:39,0:21:12.49:0,12,76	0/0:14,0:29:65.19:0,65,370	0/1:5,9:14:0.05:179,0,0	0/1:4,5:9:5.27:98,0,5	1/1:8,18:26:55.85:435,56,0	0/0:6,0:13:25.46:0,25,165	1/1:8,14:21:50.73:389,51,0	1/1:8,10:17:5.74:228,6,0	0/0:11,0:10:12.61:0,13,152	0/0:8,0:19:51.82:0,52,293	0/0:7,0:10:22.48:0,22,144	0/0:6,0:10:15.87:0,16,79	0/0:7,0:14:28.54:0,29,179	0/0:6,0:16:31.54:0,32,173	0/1:8,12:19:3.40:240,0,3	1/1:10,10:19:38.38:282,38,0	1/1:12,13:25:10.10:275,10,0	1/1:2,3:5:8.97:70,9,0	0/0:7,0:16:24.30:0,24,130	0/0:20,0:20:39.78:0,40,336	0/0:5,0:5:14.99:0,15,141	1/1:15,9:24:13.91:243,14,0	1/1:5,21:26:69.52:522,70,0	1/1:4,14:19:37.82:360,38,0	1/1:3,7:10:7.49:168,7,0
chr10	38012378	.	CAA	C	1048.14	PASS	AB=0.935;AC=30;AF=0.536;AN=56;BaseQRankSum=1.371;DP=522;FS=8.493;HRun=18;HaplotypeScore=197.6422;InbreedingCoeff=0.2557;MQ=47.85;MQ0=5;MQRankSum=-2.475;QD=3.32;ReadPosRankSum=1.221;VQSLOD=-0.5821;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:17,2:20:21.20:76,0,21	1/1:9,4:12:16.09:98,16,0	0/0:57,0:12:10.96:0,11,57	0/0:64,0:15:3.48:0,3,36	0/1:25,0:27:9.42:9,0,32	1/1:10,2:13:14.63:84,15,0	1/1:5,0:5:4.22:33,4,0	1/1:24,0:24:10.71:50,11,0	0/0:13,0:13:16.73:0,17,85	0/1:19,3:21:4.57:38,0,5	0/1:16,3:19:6.06:80,0,6	0/0:7,0:7:12.41:0,12,56	0/1:18,0:18:18.96:24,0,19	1/1:7,0:7:1.75:10,2,0	0/1:10,0:10:6.09:18,0,6	0/0:13,0:14:7.30:0,7,55	0/0:19,0:19:6.94:0,7,43	1/1:15,2:17:10.68:92,11,0	1/1:11,0:12:2.85:22,3,0	1/1:13,5:18:22.63:158,23,0	1/1:3,0:3:2.45:13,2,0	0/0:8,0:8:2:0,2,22	0/0:15,0:16:4.13:0,4,117	0/0:7,0:7:7.43:0,7,36	1/1:22,3:25:38.41:207,38,0	0/1:26,0:27:32.40:49,0,32	1/1:19,1:19:28.72:145,29,0	0/1:10,0:10:17.57:18,0,18
chr10	38012392	.	AAAAAGAGAG	A	9426.93	PASS	AB=0.993;AC=38;AF=0.679;AN=56;BaseQRankSum=0.343;DP=573;FS=0.525;HRun=0;HaplotypeScore=221.5610;InbreedingCoeff=0.0276;MQ=38.84;MQ0=13;MQRankSum=-2.436;QD=22.66;ReadPosRankSum=3.694;VQSLOD=3.8990;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:19,0:20:23.24:364,0,23	1/1:11,0:9:23.99:328,24,0	0/0:79,0:11:26.19:0,26,411	0/0:72,0:8:11.13:0,11,206	0/1:19,0:19:46.17:261,0,46	1/1:12,1:13:27:372,27,0	1/1:7,0:7:18.06:264,18,0	1/1:32,1:31:43.55:898,44,0	0/1:12,0:12:67.34:176,0,67	0/1:22,0:21:11.50:567,0,11	1/1:16,1:16:3.43:584,3,0	0/1:9,0:9:62.62:63,0,109	0/1:19,0:19:24.59:276,0,25	0/1:9,0:9:7.92:131,0,8	1/1:15,0:15:20.31:227,20,0	0/1:17,0:17:2.95:174,0,3	0/1:20,0:19:27.20:79,0,27	1/1:20,0:20:39.98:586,40,0	1/1:13,0:11:30.09:448,30,0	1/1:19,0:18:38.74:607,39,0	1/1:6,0:5:12.04:191,12,0	1/1:10,0:10:23.82:211,24,0	0/1:16,0:16:97.53:98,0,315	0/0:6,0:6:5.88:0,6,63	0/1:24,1:24:1.70:822,0,2	0/1:29,0:29:4.16:781,0,4	1/1:24,1:25:40.94:699,41,0	1/1:10,0:9:15.03:223,15,0
chr10	38012393	.	AAAAGAGAG	A	12709.36	PASS	AB=1.000;AC=46;AF=0.821;AN=56;BaseQRankSum=-1.091;DP=564;FS=3.138;HRun=0;HaplotypeScore=196.3725;InbreedingCoeff=0.3710;MQ=37.54;MQ0=13;MQRankSum=0.669;QD=31.07;ReadPosRankSum=2.657;VQSLOD=4.5891;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:16,3:19:2.32:578,2,0	1/1:8,0:8:24.08:476,24,0	0/0:79,0:11:23.13:0,23,357	0/0:70,0:7:11.83:0,12,203	1/1:17,2:19:16.28:456,16,0	1/1:7,6:13:27.08:475,27,0	1/1:7,0:8:18.06:311,18,0	1/1:27,3:29:62.03:1101,62,0	0/1:12,0:12:26.62:291,0,27	1/1:20,1:20:45.67:752,46,0	1/1:14,1:15:14.96:690,15,0	0/1:9,0:9:56.10:86,0,56	1/1:18,0:18:4.45:431,4,0	1/1:8,0:8:11.90:217,12,0	1/1:15,1:16:20.99:320,21,0	1/1:16,1:17:16.75:359,17,0	0/1:20,0:19:19.98:133,0,20	1/1:18,1:21:44.29:730,44,0	1/1:13,0:11:29.77:457,30,0	1/1:15,0:17:47.98:881,48,0	1/1:5,1:5:12.04:213,12,0	1/1:9,1:10:24.07:323,24,0	0/1:16,0:16:99:115,0,172	0/0:6,0:6:1.78:0,2,34	1/1:20,2:22:56.70:1091,57,0	1/1:26,2:29:25.94:972,26,0	1/1:20,4:26:50.93:928,51,0	1/1:8,1:9:22.31:326,22,0
chr10	38012394	.	AAAGAGAG	A	13101.57	PASS	AB=1.000;AC=48;AF=0.857;AN=56;BaseQRankSum=-1.445;DP=559;FS=6.402;HRun=0;HaplotypeScore=185.7521;InbreedingCoeff=0.5592;MQ=37.56;MQ0=13;MQRankSum=-1.008;QD=32.43;ReadPosRankSum=2.150;VQSLOD=4.2164;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:17,1:19:32.62:553,33,0	1/1:9,0:8:24.08:411,24,0	0/0:80,0:12:15.79:0,16,390	0/0:69,0:7:13.92:0,14,191	1/1:17,2:19:35.82:578,36,0	1/1:12,0:13:27.04:429,27,0	1/1:7,1:8:18.06:307,18,0	1/1:28,1:27:62.61:1060,63,0	1/1:10,2:12:0.56:452,1,0	1/1:18,2:19:46.28:779,46,0	1/1:15,1:15:36.44:653,36,0	0/1:9,0:9:18.99:145,0,19	1/1:16,2:18:16.60:511,17,0	1/1:3,5:8:11.99:250,12,0	1/1:7,9:16:21.04:345,21,0	1/1:9,8:17:32.98:524,33,0	1/1:5,14:18:11.82:245,12,0	1/1:20,1:21:45.09:707,45,0	1/1:12,0:11:29.69:475,30,0	1/1:17,0:16:45.05:719,45,0	1/1:6,0:5:12.04:197,12,0	1/1:6,3:10:24.07:427,24,0	0/1:16,0:16:99:143,0,107	0/0:6,0:6:2.70:0,3,23	1/1:24,0:23:50.81:886,51,0	1/1:23,0:27:65.31:1071,65,0	1/1:26,1:27:47.85:810,48,0	1/1:5,4:9:24:423,24,0
chr10	38012396	.	AGAGAGAGAG	A	11597.12	PASS	AB=0.751;AC=47;AF=0.839;AN=56;BaseQRankSum=-0.194;DP=538;FS=40.883;HRun=0;HaplotypeScore=194.3411;InbreedingCoeff=0.2644;MQ=36.91;MQ0=13;MQRankSum=-0.226;QD=29.58;ReadPosRankSum=4.239;VQSLOD=2.6717;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:16:1.63:433,2,0	1/1:10,0:8:24.08:491,24,0	0/0:79,0:11:10.04:0,10,628	0/0:67,0:7:13.07:0,13,244	1/1:12,0:16:33.13:386,33,0	1/1:11,2:13:27.09:488,27,0	1/1:7,1:8:18.06:320,18,0	1/1:24,1:25:58.32:877,58,0	0/1:9,0:12:15.28:220,0,15	1/1:16,2:17:21.52:632,22,0	1/1:14,1:15:10.26:702,10,0	0/1:9,1:10:99:218,0,103	0/1:7,1:18:16.50:296,0,16	1/1:6,1:7:11.96:144,12,0	1/1:14,1:16:20.25:184,20,0	1/1:12,0:16:32.34:324,32,0	1/1:15,0:16:11.62:90,12,0	1/1:18,1:21:44.63:717,45,0	1/1:11,1:11:18.92:489,19,0	1/1:18,1:18:29.27:773,29,0	1/1:8,0:6:12.04:197,12,0	1/1:10,0:10:23.94:242,24,0	0/1:6,1:15:99:183,0,108	0/1:3,0:4:26.97:46,0,27	1/1:20,2:21:21.40:888,21,0	1/1:20,2:23:65.57:1052,66,0	1/1:26,0:27:32.54:892,33,0	1/1:9,0:9:24.06:316,24,0
chr10	38012398	.	AGAGAGAG	A	13209.86	PASS	AB=0.961;AC=49;AF=0.875;AN=56;BaseQRankSum=-2.242;DP=531;FS=29.749;HRun=0;HaplotypeScore=172.5994;InbreedingCoeff=0.4378;MQ=37.47;MQ0=13;MQRankSum=-0.391;QD=33.96;ReadPosRankSum=2.137;VQSLOD=3.0856;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:13:33.11:560,33,0	1/1:10,0:8:24.08:452,24,0	0/0:77,0:10:14.59:0,15,563	0/0:65,0:6:14.41:0,14,256	1/1:15,2:17:38.91:479,39,0	1/1:13,0:13:27.09:475,27,0	1/1:8,0:8:18.06:345,18,0	1/1:25,1:25:61.76:1152,62,0	1/1:13,0:13:1.91:332,2,0	1/1:18,0:17:45.24:805,45,0	1/1:16,0:15:25.22:692,25,0	0/1:11,0:11:76.04:192,0,76	1/1:17,0:17:18.07:423,18,0	1/1:7,0:7:12.02:160,12,0	1/1:13,0:15:19.61:242,20,0	1/1:15,1:16:32.94:477,33,0	1/1:17,0:16:11.95:147,12,0	1/1:19,1:21:44.67:732,45,0	1/1:11,2:11:22.80:562,23,0	1/1:18,0:18:45.15:831,45,0	1/1:7,0:6:12.04:208,12,0	1/1:11,0:11:26.89:295,27,0	0/1:13,0:15:99:142,0,143	0/1:4,0:4:14.57:26,0,15	1/1:20,0:19:51.17:968,51,0	1/1:23,0:23:65.43:1190,65,0	1/1:28,0:28:47.46:956,47,0	1/1:10,0:9:24.08:367,24,0
chr10	38012399	.	GAGAGAGA	G	13882.73	PASS	AB=1.000;AC=48;AF=0.857;AN=56;BaseQRankSum=-1.939;DP=533;FS=14.459;HRun=0;HaplotypeScore=171.8133;InbreedingCoeff=0.6210;MQ=37.60;MQ0=12;MQRankSum=0.660;QD=35.87;ReadPosRankSum=0.121;VQSLOD=3.7813;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,4:13:33.11:656,33,0	1/1:4,6:8:24.08:475,24,0	0/0:76,0:10:15.76:0,16,507	0/0:65,0:6:12.04:0,12,212	1/1:18,0:18:35.89:466,36,0	1/1:10,3:13:27.05:468,27,0	1/1:4,4:8:18.06:380,18,0	1/1:16,12:26:65.78:1361,66,0	1/1:13,0:13:32.65:316,33,0	1/1:5,13:17:49.36:981,49,0	1/1:10,6:15:39.13:757,39,0	0/1:11,0:11:59.18:124,0,59	1/1:17,0:17:32.96:354,33,0	1/1:7,0:7:11.97:144,12,0	1/1:15,0:15:20.04:186,20,0	1/1:16,0:16:32.97:407,33,0	1/1:17,0:16:11.97:126,12,0	1/1:11,10:21:44.80:804,45,0	1/1:10,3:11:27.06:590,27,0	1/1:7,12:18:45.14:925,45,0	1/1:1,5:6:12.04:246,12,0	1/1:11,0:11:26.96:268,27,0	0/1:15,0:15:96.27:96,0,168	0/0:5,0:5:4.54:0,5,31	1/1:7,13:19:51.17:1105,51,0	1/1:10,13:23:65.71:1275,66,0	1/1:13,15:28:48.15:1010,48,0	1/1:10,0:9:24.07:362,24,0
chr10	38012400	.	AGAGAG	A	11357.93	PASS	AB=1.000;AC=49;AF=0.875;AN=56;BaseQRankSum=-1.810;DP=526;FS=15.192;HRun=0;HaplotypeScore=164.1624;InbreedingCoeff=0.4956;MQ=37.73;MQ0=12;MQRankSum=0.941;QD=29.50;ReadPosRankSum=0.664;VQSLOD=3.6699;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:12,0:13:33.11:496,33,0	1/1:10,0:8:24.08:355,24,0	0/0:77,0:11:18.26:0,18,448	0/0:64,0:6:14.07:0,14,198	1/1:17,1:18:41.56:507,42,0	1/1:13,0:13:27.07:380,27,0	1/1:8,0:8:18.06:261,18,0	1/1:28,0:26:66.64:1023,67,0	1/1:11,1:12:32.87:402,33,0	1/1:18,0:17:45.45:675,45,0	1/1:15,0:14:39.13:585,39,0	0/1:11,0:11:30.27:156,0,30	1/1:15,0:15:30.09:383,30,0	1/1:7,0:7:12.03:161,12,0	1/1:13,2:15:20.92:227,21,0	1/1:16,0:16:33.04:416,33,0	1/1:17,0:16:12.02:135,12,0	1/1:21,0:21:45.01:588,45,0	1/1:12,0:10:27.09:453,27,0	1/1:19,0:18:45.14:651,45,0	1/1:7,0:6:12.04:175,12,0	1/1:10,0:10:27.07:313,27,0	0/1:15,0:15:94.95:124,0,95	0/1:5,0:5:8.95:14,0,9	1/1:20,0:19:51.17:779,51,0	1/1:23,0:23:66.19:990,66,0	1/1:27,0:27:48.16:763,48,0	1/1:10,0:9:24.04:344,24,0
chr10	38012405	.	GA	G	1934.71	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-1.179;DP=549;FS=6.561;HRun=11;HaplotypeScore=174.1557;InbreedingCoeff=0.7831;MQ=38.11;MQ0=14;MQRankSum=-2.641;QD=7.96;ReadPosRankSum=1.103;VQSLOD=0.6931;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:12,2:14:19.06:119,19,0	1/1:10,1:9:11.83:121,12,0	0/0:76,1:10:20.45:0,20,146	0/0:63,0:5:4.98:0,5,62	0/0:18,0:18:19.68:0,20,132	1/1:14,0:14:3.98:64,4,0	1/1:8,0:8:10.76:75,11,0	1/1:29,1:28:33.59:257,34,0	0/0:11,0:11:22.35:0,22,124	1/1:18,0:17:23.65:209,24,0	1/1:16,0:15:6.28:125,6,0	0/0:12,0:12:20.63:0,21,162	0/0:16,0:16:15.44:0,15,99	0/0:10,0:10:14.82:0,15,126	0/0:19,0:19:29.33:0,29,189	0/0:17,0:17:0.72:0,1,89	0/0:18,0:17:8.98:0,9,45	1/1:21,1:22:2.09:133,2,0	1/1:14,1:11:13.73:134,14,0	1/1:18,0:17:27.75:208,28,0	1/1:7,0:6:7.98:51,8,0	0/0:10,0:10:17.58:0,18,98	0/0:15,0:15:30.45:0,30,186	0/0:7,0:7:0.92:0,1,45	1/1:20,0:19:32.09:242,32,0	1/1:23,0:23:23.45:189,23,0	1/1:27,0:27:30.11:212,30,0	0/0:10,0:9:0.53:0,1,16
chr10	38014326	.	AAAAT	A	1415.32	PASS	AB=0.993;AC=27;AF=0.482;AN=56;BaseQRankSum=2.276;DP=419;FS=40.181;HRun=0;HaplotypeScore=91.1629;InbreedingCoeff=-0.2803;MQ=54.11;MQ0=16;MQRankSum=0.498;QD=4.57;ReadPosRankSum=3.573;VQSLOD=-0.5063;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:35:45.93:0,46,512	0/1:10,0:10:17.86:86,0,18	0/0:21,0:5:11.76:0,12,117	0/0:15,0:5:9.01:0,9,132	0/1:19,0:19:4.94:5,0,95	0/1:9,0:9:12.69:52,0,13	1/1:12,0:12:2.65:14,3,0	1/1:10,1:10:18.37:144,18,0	0/1:12,1:13:52.46:85,0,52	0/1:19,0:18:43.01:146,0,43	0/1:12,0:11:16.17:68,0,16	0/1:14,0:14:15.81:91,0,16	0/1:10,0:9:19.46:19,0,89	0/0:7,0:5:4.63:0,5,42	0/1:12,0:11:43.84:44,0,50	0/1:15,0:14:30.21:30,0,116	0/1:20,0:19:50.83:51,0,89	0/1:12,0:10:18.16:83,0,18	0/1:12,0:12:57.19:57,0,66	0/1:22,0:22:52.02:52,0,54	1/1:3,6:9:0.95:39,1,0	0/1:13,0:12:32.11:72,0,32	1/1:14,0:14:14.79:226,15,0	1/1:17,1:18:2.75:26,3,0	0/1:21,1:22:99:176,0,109	0/0:15,0:15:40.13:0,40,337	0/1:12,0:9:2.88:12,0,3	0/0:15,0:13:28.65:0,29,249
chr10	38014327	.	AAAT	A	1989.76	PASS	AB=1.000;AC=33;AF=0.589;AN=56;BaseQRankSum=0.820;DP=418;FS=25.162;HRun=0;HaplotypeScore=85.2608;InbreedingCoeff=0.6840;MQ=55.59;MQ0=16;MQRankSum=-1.635;QD=7.80;ReadPosRankSum=3.075;VQSLOD=0.9120;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:35:12.38:0,12,229	1/1:10,0:10:20.24:139,20,0	0/0:21,0:5:10.21:0,10,101	0/0:16,0:6:8.99:0,9,111	0/1:19,0:19:2.74:3,0,86	1/1:9,0:9:16.64:121,17,0	1/1:12,0:12:8.71:68,9,0	1/1:11,0:10:23.19:173,23,0	0/1:12,0:12:13.01:13,0,60	1/1:18,1:18:14.09:196,14,0	1/1:12,0:11:17.33:103,17,0	1/1:14,0:14:20.70:175,21,0	0/0:10,0:9:6.68:0,7,86	0/0:7,0:5:6.77:0,7,45	0/0:12,0:11:6.46:0,6,82	0/0:15,0:14:15.68:0,16,141	0/0:19,0:18:11.52:0,12,109	1/1:12,0:10:17.59:124,18,0	1/1:13,0:13:16.31:129,16,0	1/1:21,1:22:25.65:172,26,0	1/1:9,0:9:2.98:28,3,0	0/0:13,0:12:0.39:0,0,44	1/1:14,0:14:35.75:291,36,0	1/1:15,3:18:11.76:81,12,0	1/1:21,2:23:10.78:293,11,0	0/0:14,0:14:33.31:0,33,265	1/1:10,2:9:10.62:79,11,0	0/1:14,0:12:0.39:0,0,117
chr10	38014328	.	AAT	A	2574.55	PASS	AB=0.972;AC=31;AF=0.554;AN=56;BaseQRankSum=-5.160;DP=419;FS=5.265;HRun=0;HaplotypeScore=78.7455;InbreedingCoeff=0.8118;MQ=57.29;MQ0=14;MQRankSum=1.305;QD=10.59;ReadPosRankSum=-1.051;VQSLOD=2.6724;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:34,1:34:15.89:76,0,16	1/1:7,3:10:22.52:197,23,0	0/0:22,0:6:2.46:0,2,104	0/0:16,0:6:8.99:0,9,95	0/0:19,0:19:21.36:0,21,135	1/1:5,3:8:18.43:161,18,0	1/1:11,1:12:8.98:80,9,0	1/1:5,6:10:23.45:186,23,0	0/0:13,0:13:8.13:0,8,93	1/1:16,2:18:30.50:257,30,0	1/1:4,7:10:20.53:140,21,0	1/1:14,1:15:29.51:259,30,0	0/0:8,0:8:14.68:0,15,99	0/0:7,0:5:9.86:0,10,57	0/0:12,0:11:24.30:0,24,121	0/0:18,0:17:34.53:0,35,239	0/0:19,0:18:27.37:0,27,142	1/1:11,1:10:20.74:157,21,0	1/1:13,1:14:15.45:196,15,0	1/1:21,1:22:30.69:208,31,0	1/1:7,1:8:3.86:23,4,0	0/0:14,0:13:18.60:0,19,85	1/1:12,2:14:35.95:304,36,0	1/1:15,3:18:11.96:112,12,0	1/1:22,1:23:34.85:324,35,0	0/0:13,1:14:8.30:0,8,203	1/1:11,1:9:11.97:109,12,0	0/0:14,0:12:8.01:0,8,97
chr10	38014329	.	AT	A	2653.49	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=-4.912;DP=389;FS=6.690;HRun=1;HaplotypeScore=71.4214;InbreedingCoeff=0.9392;MQ=60.54;MQ0=14;MQRankSum=1.623;QD=12.46;ReadPosRankSum=-1.783;VQSLOD=1.4296;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:31,1:31:57.51:259,58,0	1/1:10,0:10:23.68:166,24,0	0/0:22,0:6:11.98:0,12,108	0/0:17,0:7:8.98:0,9,79	0/0:18,0:18:27.74:0,28,165	1/1:6,1:7:18.32:147,18,0	1/1:1,8:9:8.89:64,9,0	1/1:9,1:9:23.41:167,23,0	0/0:12,0:12:18.95:0,19,139	1/1:17,1:18:36.36:262,36,0	1/1:8,0:7:20.49:127,20,0	1/1:10,2:12:29.95:255,30,0	0/0:8,0:8:21.81:0,22,137	0/0:7,0:5:9.98:0,10,58	0/0:12,0:11:29.96:0,30,158	0/0:19,0:18:40.77:0,41,287	0/0:19,0:18:33.06:0,33,175	1/1:8,1:7:20.72:146,21,0	1/1:10,2:12:26.91:220,27,0	1/1:4,12:16:31.07:223,31,0	1/1:7,0:7:4.12:18,4,0	0/0:14,0:13:24.63:0,25,124	1/1:13,1:14:35.76:283,36,0	1/1:15,2:17:12.83:86,13,0	1/1:20,0:20:48.05:350,48,0	0/0:14,0:14:28.47:0,28,261	1/1:4,8:9:11.91:106,12,0	0/0:14,0:12:29.31:0,29,160
chr10	38014434	.	A	AACAC	5850.48	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=2.160;DP=580;FS=1.482;HRun=0;HaplotypeScore=191.6587;InbreedingCoeff=0.4797;MQ=54.37;MQ0=21;MQRankSum=0.518;QD=11.56;ReadPosRankSum=1.731;VQSLOD=4.5207;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,25:42:72.25:1616,72,0	1/1:6,0:6:12.03:198,12,0	0/0:40,0:16:12.04:0,12,165	0/0:33,0:18:11.52:0,12,154	1/1:21,0:21:2.82:42,3,0	1/1:9,0:8:5.36:32,5,0	1/1:32,0:29:26.97:360,27,0	1/1:31,0:25:21.06:268,21,0	1/1:15,0:14:11.63:146,12,0	1/1:19,0:19:28.54:286,29,0	1/1:9,0:9:5.23:54,5,0	1/1:19,0:21:12.04:196,12,0	1/1:21,0:21:8.77:115,9,0	1/1:11,0:9:9.03:148,9,0	1/1:10,0:10:3.01:51,3,0	1/1:11,0:10:3.01:52,3,0	1/1:19,0:15:13:112,13,0	1/1:8,0:7:7.42:42,7,0	1/1:20,0:18:26.61:345,27,0	1/1:15,0:15:15.02:225,15,0	1/1:45,0:44:14.25:119,14,0	1/1:16,0:16:3:47,3,0	1/1:8,3:19:5.14:40,5,0	1/1:25,0:27:20.80:229,21,0	1/1:24,0:24:14.77:234,15,0	1/1:25,0:24:44.98:581,45,0	1/1:14,0:13:4.72:21,5,0	1/1:8,0:10:18.53:291,19,0
chr10	38014512	.	C	CCA	18872.96	PASS	AB=0.563;AC=51;AF=0.911;AN=56;BaseQRankSum=-4.968;DP=787;FS=3.890;HRun=0;HaplotypeScore=149.3550;InbreedingCoeff=0.6789;MQ=49.32;MQ0=23;MQRankSum=2.679;QD=28.55;ReadPosRankSum=3.293;VQSLOD=6.4722;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:20,18:36:33.45:982,33,0	1/1:1,8:9:21.07:341,21,0	0/0:69,0:13:14.25:0,14,151	0/0:56,0:23:19.75:0,20,209	1/1:7,9:16:24.05:389,24,0	1/1:3,18:22:20.49:805,20,0	1/1:19,12:30:29.48:869,29,0	1/1:24,10:33:42.10:628,42,0	1/1:8,22:31:59.62:897,60,0	1/1:6,20:24:27.21:902,27,0	1/1:2,10:12:33.11:533,33,0	1/1:4,28:32:75.23:1133,75,0	1/1:7,16:23:27.13:728,27,0	1/1:5,19:23:48.16:736,48,0	1/1:3,31:35:67.42:1317,67,0	1/1:5,20:25:23.52:834,24,0	1/1:5,17:23:21.67:840,22,0	1/1:1,10:11:23:373,23,0	1/1:13,13:24:11.82:576,12,0	1/1:6,14:20:30.10:456,30,0	1/1:15,47:63:74.54:1039,75,0	0/1:4,14:18:28.28:544,0,28	1/1:8,14:22:2.22:512,2,0	1/1:12,32:46:56.91:896,57,0	1/1:4,6:10:21.05:304,21,0	1/1:6,32:38:99:1517,99,0	1/1:5,12:15:32.88:534,33,0	1/1:1,4:4:12.04:189,12,0
chr10	38014574	.	T	TACACAC	7045.06	PASS	AB=1.000;AC=45;AF=0.833;AN=54;BaseQRankSum=-0.605;DP=671;FS=0.000;HRun=0;HaplotypeScore=178.3669;InbreedingCoeff=0.6296;MQ=39.71;MQ0=33;MQRankSum=-2.092;QD=14.26;ReadPosRankSum=0.612;VQSLOD=4.2269;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:33:32.10:359,32,0	1/1:3,2:5:3.01:94,3,0	0/0:54,0:8:11.97:0,12,139	0/0:72,0:15:14.10:0,14,297	1/1:11,0:11:6:69,6,0	1/1:16,7:24:20.32:352,20,0	1/1:8,23:33:9.03:240,9,0	1/1:33,2:32:53.10:1065,53,0	1/1:17,3:19:27.01:497,27,0	1/1:16,3:18:12.47:675,12,0	1/1:11,2:14:3.01:59,3,0	1/1:17,7:26:20.22:293,20,0	1/1:13,3:17:18.22:268,18,0	1/1:18,1:17:8.88:139,9,0	1/1:19,2:23:6:63,6,0	1/1:11,3:14:15.03:312,15,0	1/1:13,3:17:18.50:402,19,0	0/1:8,0:7:4.58:26,0,5	1/1:13,4:15:5.28:568,5,0	1/1:6,4:9:5.76:37,6,0	1/1:34,11:46:9.02:203,9,0	1/1:15,1:16:14.46:187,14,0	1/1:13,5:18:3:25,3,0	1/1:23,7:29:10.91:175,11,0	./.	0/0:22,0:22:53.78:0,54,1045	1/1:9,20:27:36.06:939,36,0	0/0:11,0:10:30.10:0,30,648
chr10	38014586	.	CACAG	C	567.53	PASS	AB=0.990;AC=25;AF=0.446;AN=56;BaseQRankSum=2.864;DP=714;FS=9.235;HRun=0;HaplotypeScore=184.7471;InbreedingCoeff=-0.1431;MQ=38.27;MQ0=51;MQRankSum=0.823;QD=1.18;ReadPosRankSum=-2.258;VQSLOD=1.4421;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:38,1:34:61.76:62,0,236	1/1:4,0:4:2.88:15,3,0	0/0:78,0:9:11.15:0,11,220	0/1:99,0:15:18.59:19,0,411	1/1:8,0:8:4.55:28,5,0	1/1:23,0:23:0.48:71,0,0	0/0:32,0:32:8.14:0,8,105	0/1:39,0:34:27.30:27,0,367	0/1:20,1:20:32.61:66,0,33	0/1:17,0:15:19.52:20,0,226	1/1:10,0:10:2.97:20,3,0	0/1:26,0:26:48.99:59,0,49	0/1:16,0:16:15.68:16,0,29	0/1:17,1:16:5.67:32,0,6	0/0:19,0:19:1.88:0,2,23	0/1:15,0:15:14.50:15,0,24	0/1:15,0:13:30.96:31,0,35	0/1:9,0:8:7.24:27,0,7	0/0:23,0:17:18.94:0,19,424	0/1:12,0:11:1.56:18,0,2	0/1:47,1:48:24.19:63,0,24	0/1:15,0:15:4.87:51,0,5	0/0:14,0:14:2.96:0,3,19	1/1:29,3:31:5.89:85,6,0	0/1:15,0:15:0:0,0,0	0/0:25,0:25:68.06:0,68,1458	0/0:28,0:25:9.01:0,9,170	0/0:11,0:10:30.10:0,30,807
chr10	38014588	.	CAG	C	1789.89	PASS	AB=0.903;AC=36;AF=0.643;AN=56;BaseQRankSum=2.959;DP=705;FS=2.460;HRun=0;HaplotypeScore=168.2791;InbreedingCoeff=-0.1020;MQ=38.81;MQ0=54;MQRankSum=-0.640;QD=3.05;ReadPosRankSum=-2.739;VQSLOD=2.2033;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:40,0:35:38.69:39,0,170	1/1:3,0:3:2.90:16,3,0	0/0:80,0:7:11.12:0,11,180	0/1:103,0:20:3.46:3,0,296	1/1:4,5:9:5.96:44,6,0	0/1:19,3:22:24.63:108,0,25	0/1:27,0:27:21.46:21,0,39	0/1:32,5:33:99:159,0,295	1/1:14,6:19:20.64:236,21,0	0/1:13,4:15:99:151,0,143	1/1:7,2:9:3.01:35,3,0	0/1:21,3:24:37.80:100,0,38	1/1:15,1:17:2.22:117,2,0	1/1:9,8:15:11.52:79,12,0	0/1:13,7:20:18.09:18,0,24	0/1:8,7:15:2.89:125,0,3	0/1:12,1:12:60.51:79,0,61	0/1:8,0:7:8.20:26,0,8	0/1:21,1:16:53.22:53,0,213	1/1:10,1:10:4.09:31,4,0	0/1:46,3:49:24.09:96,0,24	1/1:8,7:15:12.44:133,12,0	1/1:11,2:13:3:25,3,0	1/1:31,1:31:12.05:132,12,0	0/1:14,1:15:0:0,0,0	0/0:25,0:25:61.67:0,62,1037	1/1:26,2:25:11.68:126,12,0	0/0:11,0:10:30.10:0,30,577
chr10	38014593	.	ACACAGT	A	680.22	PASS	AB=0.994;AC=26;AF=0.464;AN=56;BaseQRankSum=6.207;DP=702;FS=7.564;HRun=0;HaplotypeScore=182.3836;InbreedingCoeff=0.1799;MQ=38.59;MQ0=55;MQRankSum=-2.903;QD=1.99;ReadPosRankSum=-0.453;VQSLOD=2.1772;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:32:22.30:0,22,411	1/1:4,0:4:3:28,3,0	0/0:88,0:6:11.95:0,12,173	0/0:113,0:20:40.13:0,40,662	1/1:7,1:8:2.98:21,3,0	0/1:20,0:20:30.73:31,0,82	0/0:25,0:25:5.31:0,5,88	0/1:35,0:31:40.50:40,0,1243	1/1:20,0:19:16.39:130,16,0	0/1:18,0:15:61.97:62,0,193	1/1:8,1:9:2.97:21,3,0	0/1:22,0:22:55.71:56,0,95	0/1:18,0:18:29.40:36,0,29	1/1:17,0:15:4.26:40,4,0	0/0:21,0:21:2.84:0,3,33	0/1:15,0:15:1.78:63,0,2	0/1:12,0:11:64.85:65,0,96	0/0:7,0:6:0.89:0,1,67	0/0:23,0:18:24.15:0,24,573	0/0:10,0:9:5.13:0,5,36	0/1:48,0:48:64.55:65,0,115	1/1:12,2:14:5.98:47,6,0	0/1:12,0:12:0:0,0,0	1/1:29,0:28:4.35:57,4,0	0/1:14,1:15:0:0,0,0	0/0:25,0:25:23.94:0,24,1371	1/1:26,0:24:12.74:84,13,0	0/0:11,0:10:30.10:0,30,742
chr10	38014597	.	AGT	A	635.67	PASS	AB=0.968;AC=27;AF=0.482;AN=56;BaseQRankSum=6.258;DP=673;FS=12.318;HRun=0;HaplotypeScore=150.1650;InbreedingCoeff=0.0223;MQ=37.57;MQ0=53;MQRankSum=-1.166;QD=1.94;ReadPosRankSum=-1.640;VQSLOD=1.6561;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,1:27:19.60:0,20,317	1/1:4,0:4:2.04:6,2,0	0/0:97,0:6:11.87:0,12,172	0/0:119,0:22:33.96:0,34,606	1/1:8,0:8:3.01:45,3,0	0/1:18,0:18:46.87:47,0,65	0/1:24,0:24:5.22:5,0,89	0/0:35,0:32:6.54:0,7,1193	1/1:15,1:15:17.87:163,18,0	0/1:16,1:14:64.89:65,0,278	1/1:8,0:8:3.01:42,3,0	0/1:19,1:20:50.82:51,0,96	0/1:15,1:16:38.20:57,0,38	1/1:14,0:12:7.56:66,8,0	0/0:20,0:20:2.71:0,3,47	0/1:14,0:14:10.08:45,0,10	0/1:10,1:10:35.98:36,0,118	0/1:6,0:6:18.46:18,0,97	0/1:20,0:16:1.44:1,0,477	0/0:9,0:8:3.42:0,3,42	0/1:45,2:47:32.86:33,0,109	1/1:11,0:11:5.97:46,6,0	0/1:10,0:10:0:0,0,0	1/1:20,2:21:2.80:33,3,0	0/1:15,0:15:0:0,0,0	0/0:24,0:24:15.80:0,16,1160	0/1:25,0:23:35.45:35,0,74	0/0:11,0:10:30.10:0,30,609
chr10	38014598	.	GTC	G	134.56	PASS	AB=0.992;AC=23;AF=0.411;AN=56;BaseQRankSum=5.625;DP=672;FS=3.552;HRun=0;HaplotypeScore=150.7969;InbreedingCoeff=0.1333;MQ=37.41;MQ0=53;MQRankSum=-0.630;QD=0.49;ReadPosRankSum=-0.417;VQSLOD=2.5252;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:27:23.99:0,24,423	0/0:4,0:4:2.22:0,2,7	0/0:97,0:7:11.33:0,11,157	0/0:120,0:23:41.98:0,42,737	1/1:8,0:8:2.98:21,3,0	0/1:17,1:18:6.29:6,0,106	0/0:24,0:24:7.28:0,7,117	0/0:38,0:35:65.97:0,66,1517	1/1:16,0:15:11.35:57,11,0	0/1:16,0:13:24.96:25,0,330	1/1:8,0:8:2.97:20,3,0	0/1:20,0:20:13.88:14,0,121	0/1:16,0:16:16.19:16,0,65	1/1:14,0:12:5.66:27,6,0	0/0:20,0:20:2.84:0,3,60	0/1:13,0:13:11.27:11,0,23	0/1:11,0:10:18.11:18,0,192	0/1:7,0:6:2.40:2,0,112	0/0:20,0:16:6.68:0,7,576	0/0:9,0:8:4.19:0,4,60	0/1:46,0:46:15.27:15,0,112	1/1:11,0:11:5.78:35,6,0	0/1:10,0:10:0:0,0,0	1/1:19,2:20:4.21:13,4,0	0/1:15,0:15:0:0,0,0	0/0:23,0:23:46.36:0,46,1160	0/1:24,1:23:9.91:10,0,181	0/0:11,0:10:30.10:0,30,609
chr10	38014610	.	CAGACACACACAG	C	1394.37	PASS	AB=1.000;AC=26;AF=0.520;AN=50;BaseQRankSum=1.737;DP=607;FS=0.000;HRun=0;HaplotypeScore=164.4225;InbreedingCoeff=0.1124;MQ=36.45;MQ0=48;MQRankSum=-0.126;QD=4.33;ReadPosRankSum=-0.984;VQSLOD=2.5461;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:26:5.34:0,5,117	0/1:5,0:5:0:0,0,0	0/0:75,0:4:11.08:0,11,71	0/0:100,0:18:17.76:0,18,322	./.	1/1:15,0:15:9.06:153,9,0	0/1:22,0:21:23.56:24,0,28	0/0:33,0:30:32.54:0,33,177	1/1:16,2:17:24.80:289,25,0	0/1:15,0:12:36.08:36,0,40	0/1:6,0:6:0:0,0,0	0/0:16,0:16:3.38:0,3,13	1/1:16,1:17:11.77:184,12,0	0/1:12,0:12:4.26:4,0,6	1/1:16,0:16:3:25,3,0	1/1:10,3:13:11.02:231,11,0	0/1:12,0:10:20.84:69,0,21	0/1:10,0:9:2.14:2,0,48	0/1:20,0:16:63.29:107,0,63	0/0:6,0:6:2.98:0,3,21	0/1:49,0:48:7.94:77,0,8	./.	./.	1/1:23,0:22:2.05:18,2,0	0/1:12,0:12:0:0,0,0	0/1:21,0:21:77.43:77,0,96	1/1:26,0:24:5.64:236,6,0	0/1:10,0:10:8.39:8,0,41
chr10	38014612	.	GAC	G	236.47	PASS	AB=0.950;AC=16;AF=0.364;AN=44;BaseQRankSum=0.459;DP=617;FS=15.277;HRun=0;HaplotypeScore=134.4204;InbreedingCoeff=0.0277;MQ=36.55;MQ0=46;MQRankSum=1.746;QD=0.89;ReadPosRankSum=1.433;VQSLOD=1.8900;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:22,10:28:5.10:59,5,0	0/0:4,0:5:0.47:0,0,1	0/0:71,1:4:8.93:0,9,83	0/0:99,2:18:27.06:0,27,328	./.	1/1:13,0:14:6.82:37,7,0	1/1:21,1:22:1.01:46,1,0	0/0:33,0:30:2.68:0,3,20	0/1:19,0:18:5.53:6,0,43	0/1:14,1:12:11.61:20,0,12	./.	0/1:14,0:14:1.03:12,0,1	0/0:17,0:17:4.57:0,5,22	0/0:15,0:15:8.97:0,9,70	./.	0/1:15,0:16:20.82:21,0,66	0/0:16,0:14:12.23:0,12,73	0/1:10,0:10:14.67:15,0,70	0/1:19,1:17:29.49:42,0,29	./.	1/1:44,0:45:0.94:19,1,0	0/0:10,0:10:0:0,0,0	./.	0/1:25,0:27:1.29:38,0,1	./.	0/0:16,0:17:1.63:0,2,18	0/1:22,1:24:38.80:47,0,39	0/0:10,0:10:0.72:0,1,32
chr10	38014618	.	CACAG	C	2514.27	PASS	AB=0.974;AC=34;AF=0.680;AN=50;BaseQRankSum=-2.744;DP=616;FS=4.238;HRun=0;HaplotypeScore=130.3055;InbreedingCoeff=0.0683;MQ=37.55;MQ0=41;MQRankSum=1.789;QD=5.92;ReadPosRankSum=2.175;VQSLOD=2.4583;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:37,0:33:5.69:69,0,6	0/0:4,0:4:0:0,0,0	0/0:61,0:4:8.17:0,8,37	0/0:89,0:17:1.55:0,2,125	./.	1/1:13,0:13:11.78:114,12,0	1/1:22,0:21:11.40:131,11,0	1/1:32,0:27:47.33:387,47,0	0/1:15,2:17:4.46:213,0,4	1/1:16,0:13:1.20:124,1,0	./.	1/1:17,0:17:9.81:57,10,0	1/1:17,0:17:14.81:145,15,0	0/1:15,0:15:0.13:9,0,0	1/1:15,0:15:2.98:22,3,0	0/1:16,2:18:4.28:56,0,4	0/1:17,0:15:11.80:56,0,12	0/1:12,0:11:38.81:58,0,39	1/1:18,0:16:20.73:207,21,0	0/0:8,0:8:0:0,0,0	1/1:52,0:48:11.79:127,12,0	1/1:15,0:15:8.59:74,9,0	1/1:8,0:8:2.94:18,3,0	1/1:31,0:31:8.20:118,8,0	./.	1/1:17,0:17:44.44:309,44,0	0/1:25,0:23:8.18:189,0,8	0/1:10,0:10:6.72:158,0,7
chr10	38014622	.	GAC	G	733.09	PASS	AB=0.979;AC=22;AF=0.440;AN=50;BaseQRankSum=-2.359;DP=622;FS=6.686;HRun=0;HaplotypeScore=128.1141;InbreedingCoeff=0.1701;MQ=38.50;MQ0=37;MQRankSum=2.309;QD=2.26;ReadPosRankSum=-1.748;VQSLOD=1.8912;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:31,0:32:22.75:26,0,23	0/0:4,0:4:0.47:0,0,1	./.	./.	0/0:12,0:12:5.50:0,6,47	1/1:14,0:14:8.54:65,9,0	1/1:24,0:23:11.35:142,11,0	1/1:32,1:28:8.93:82,9,0	0/0:18,0:18:0.67:0,1,45	0/1:18,1:16:39.40:101,0,39	0/1:6,0:6:0:0,0,0	0/1:16,0:16:0.40:9,0,0	0/0:19,0:19:5.43:0,5,27	0/0:15,0:15:11.97:0,12,96	0/0:18,0:17:3.88:0,4,27	0/1:17,0:17:12.41:12,0,68	0/0:17,0:15:8.76:0,9,55	0/1:13,0:12:16.07:52,0,16	1/1:20,0:17:2.87:15,3,0	1/1:13,0:13:2.53:21,3,0	0/1:49,0:46:4.31:99,0,4	0/0:18,0:18:0:0,0,0	1/1:8,0:8:3.01:32,3,0	1/1:29,3:31:13.77:142,14,0	./.	0/0:21,0:21:7.40:0,7,68	0/1:23,0:22:21.07:77,0,21	0/0:10,0:10:3.01:0,3,36
chr10	38015354	.	TG	T	8836.30	PASS	AB=0.636;AC=43;AF=0.768;AN=56;BaseQRankSum=-0.482;DP=603;FS=1.474;HRun=10;HaplotypeScore=67.3731;InbreedingCoeff=0.8247;MQ=78.75;MQ0=1;MQRankSum=-3.727;QD=18.37;ReadPosRankSum=1.789;VQSLOD=5.7415;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:51.11:0,51,547	1/1:2,5:7:11.99:104,12,0	0/0:19,0:19:36.08:0,36,386	0/0:19,1:20:3.32:0,3,235	1/1:3,16:20:44:370,44,0	0/1:9,12:20:21.30:294,0,21	1/1:8,20:28:56.98:495,57,0	1/1:9,15:24:26.88:227,27,0	1/1:2,20:23:59.03:501,59,0	1/1:7,19:27:62.01:526,62,0	1/1:5,22:27:59.98:521,60,0	0/0:11,0:11:15.04:0,15,166	1/1:2,22:25:62.98:547,63,0	1/1:4,14:18:38.98:338,39,0	1/1:1,21:23:59.02:501,59,0	1/1:5,12:17:32.99:287,33,0	1/1:7,28:37:82.27:751,82,0	1/1:2,12:14:35.99:313,36,0	1/1:6,10:16:2.81:253,3,0	1/1:5,13:18:32.96:286,33,0	1/1:14,25:40:43.81:598,44,0	1/1:4,16:20:44.98:386,45,0	0/0:14,0:14:27.05:0,27,286	0/0:26,1:27:43.11:0,43,688	1/1:6,15:21:28.17:369,28,0	1/1:5,22:27:65.72:572,66,0	1/1:2,15:17:44.98:391,45,0	1/1:1,9:10:23.99:208,24,0
chr10	38016236	.	C	CACCCGATGGG	18915.87	PASS	AB=1.000;AC=51;AF=0.911;AN=56;BaseQRankSum=-1.723;DP=569;FS=4.435;HRun=0;HaplotypeScore=186.4215;InbreedingCoeff=0.7430;MQ=76.63;MQ0=0;MQRankSum=-5.789;QD=36.03;ReadPosRankSum=0.494;VQSLOD=4.3139;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:26,2:30:30.43:762,30,0	1/1:13,2:17:8.39:119,8,0	0/0:18,0:18:9.03:0,9,256	0/0:26,0:26:23.44:0,23,471	1/1:16,0:16:5.40:126,5,0	1/1:11,5:17:25.33:904,25,0	1/1:24,7:31:23.56:684,24,0	1/1:18,0:18:15.05:584,15,0	1/1:15,12:27:33.11:1484,33,0	1/1:17,2:21:33.11:992,33,0	0/1:3,0:3:0:0,0,0	1/1:14,5:19:21.07:925,21,0	1/1:16,7:25:14.78:698,15,0	1/1:21,8:29:25.33:967,25,0	1/1:16,6:23:25.33:1030,25,0	1/1:6,9:17:27.09:1200,27,0	1/1:15,9:25:27.09:1255,27,0	1/1:21,6:29:39.13:1757,39,0	1/1:9,1:12:16.25:336,16,0	1/1:13,0:13:9.48:176,9,0	1/1:35,1:36:35.10:813,35,0	1/1:11,1:13:10.28:203,10,0	1/1:10,0:10:12.90:161,13,0	1/1:16,3:21:9.03:238,9,0	1/1:16,0:16:31.28:768,31,0	1/1:22,0:22:39.07:1073,39,0	1/1:13,12:26:27.09:1243,27,0	1/1:9,0:9:12.04:419,12,0
chr10	38017269	.	CTATTAT	C	1099.23	PASS	AC=30;AF=0.625;AN=48;BaseQRankSum=-3.435;DP=330;FS=0.000;HRun=0;HaplotypeScore=76.6737;InbreedingCoeff=0.4875;MQ=77.38;MQ0=2;MQRankSum=-0.929;QD=5.67;ReadPosRankSum=-0.590;VQSLOD=1.5313;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:16.41:0,16,365	1/1:2,2:4:3.01:60,3,0	./.	0/0:8,0:8:0:0,0,0	0/0:11,0:10:7.84:0,8,133	1/1:3,9:12:9.03:181,9,0	1/1:8,0:8:3.01:49,3,0	1/1:33,0:32:3:25,3,0	0/0:12,0:12:9.03:0,9,185	1/1:8,4:12:12.04:205,12,0	./.	1/1:12,0:12:3.48:36,3,0	0/0:5,0:5:3.01:0,3,56	0/0:9,0:9:3.01:0,3,65	0/0:9,0:9:3.01:0,3,78	0/0:6,0:6:3.01:0,3,95	0/0:36,0:36:48.06:0,48,874	1/1:14,9:23:3.01:60,3,0	1/1:11,4:15:9.50:169,10,0	1/1:8,3:11:2.94:18,3,0	1/1:9,0:9:3.01:60,3,0	./.	./.	1/1:3,0:5:3.01:40,3,0	1/1:8,5:14:6.02:102,6,0	1/1:4,1:5:3.01:60,3,0	1/1:8,7:15:6.02:121,6,0	1/1:9,7:15:3.01:60,3,0
chr10	38017317	.	T	TTACTAC	2624.75	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=0.511;DP=284;FS=41.538;HRun=0;HaplotypeScore=64.9225;InbreedingCoeff=0.7975;MQ=55.10;MQ0=5;MQRankSum=0.857;QD=22.63;ReadPosRankSum=-1.614;VQSLOD=0.8610;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:8.84:0,9,80	0/0:3,0:3:5.82:0,6,35	0/0:7,0:3:3.01:0,3,60	0/0:6,0:4:12.04:0,12,209	1/1:13,0:12:21.05:311,21,0	0/0:14,0:14:23.97:0,24,342	0/0:7,0:7:17.04:0,17,187	0/0:19,0:16:30.08:0,30,459	1/1:9,0:9:24.04:360,24,0	0/0:10,0:9:12.04:0,12,215	0/0:9,0:7:21.07:0,21,361	1/1:8,0:8:15.05:244,15,0	1/1:8,0:8:15.03:216,15,0	1/1:6,0:6:18.06:274,18,0	1/1:1,4:7:3.01:86,3,0	1/1:7,0:7:21.07:346,21,0	1/1:25,0:25:34.11:406,34,0	0/0:21,0:21:33.11:0,33,563	0/0:10,0:10:18.03:0,18,297	0/0:8,0:8:15.05:0,15,238	0/0:6,0:6:14.90:0,15,142	1/1:8,0:8:21.05:311,21,0	1/1:6,0:6:12.02:152,12,0	1/1:6,0:6:7.67:88,8,0	0/0:14,0:14:30.10:0,30,469	0/0:9,0:9:4.93:0,5,38	0/0:14,0:13:27.08:0,27,439	0/1:13,0:12:20.16:42,0,20
chr10	38019222	.	A	AT	9268.75	PASS	AB=0.727;AC=36;AF=0.643;AN=56;BaseQRankSum=-13.191;DP=567;FS=0.000;HRun=9;HaplotypeScore=54.4847;InbreedingCoeff=0.8276;MQ=76.43;MQ0=0;MQRankSum=-2.421;QD=24.65;ReadPosRankSum=0.958;VQSLOD=5.4677;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,34:41:70.20:1003,70,0	1/1:1,6:7:18.05:199,18,0	0/0:12,0:12:15.23:0,15,172	0/1:12,0:13:16.37:16,0,112	0/0:26,0:26:68.97:0,69,599	1/1:5,10:15:30.08:332,30,0	1/1:4,25:29:69.19:763,69,0	1/1:6,26:32:52.14:795,52,0	0/0:24,1:25:32.79:0,33,514	1/1:1,13:14:39.09:422,39,0	1/1:1,14:15:39.11:431,39,0	1/1:0,25:25:63.17:697,63,0	0/0:17,0:17:44.99:0,45,391	0/0:19,0:19:50.99:0,51,443	0/0:22,0:21:33.91:0,34,468	0/0:21,0:21:47.96:0,48,417	0/0:25,0:25:71.97:0,72,625	1/1:3,10:13:1.02:239,1,0	1/1:6,12:18:36.10:398,36,0	1/1:4,20:24:57.59:619,58,0	1/1:3,16:19:45.07:484,45,0	0/0:24,0:24:59.98:0,60,521	1/1:3,10:13:33.09:362,33,0	1/1:6,16:23:50.80:526,51,0	1/1:2,20:22:57.15:631,57,0	1/1:5,13:19:41.95:446,42,0	1/1:3,21:23:66.18:728,66,0	0/1:1,9:10:5:178,0,5
chr10	38021519	.	GCC	G	6018.17	PASS	AB=1.000;AC=34;AF=0.607;AN=56;BaseQRankSum=1.009;DP=411;FS=19.660;HRun=13;HaplotypeScore=84.6910;InbreedingCoeff=0.5919;MQ=70.77;MQ0=1;MQRankSum=0.428;QD=19.04;ReadPosRankSum=6.061;VQSLOD=2.1713;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:5.26:0,5,26	1/1:2,6:8:18:174,18,0	0/0:14,0:16:0.65:0,1,193	0/1:10,0:9:16.30:16,0,80	0/0:5,0:5:0:0,0,0	1/1:5,13:18:30:291,30,0	1/1:6,30:36:68.98:668,69,0	1/1:6,10:16:26.83:253,27,0	0/0:7,0:7:3.01:0,3,42	1/1:3,4:7:8.93:87,9,0	1/1:3,10:12:24.04:233,24,0	1/1:3,19:22:51.06:493,51,0	0/0:14,0:14:6.45:0,6,48	0/0:9,0:9:5.26:0,5,38	0/0:7,0:7:2.98:0,3,38	0/0:8,0:8:3.01:0,3,39	0/0:13,0:13:12.04:0,12,150	1/1:3,15:18:42.05:407,42,0	1/1:7,21:28:43.99:543,44,0	1/1:0,21:21:48:465,48,0	1/1:5,18:23:50.93:494,51,0	1/1:3,0:3:2.62:13,3,0	1/1:0,16:15:36.06:348,36,0	1/1:2,27:29:69.58:670,70,0	1/1:2,13:15:33.04:320,33,0	0/1:7,0:7:18.85:19,0,37	1/1:2,24:26:54.04:523,54,0	0/0:3,0:3:5.90:0,6,39
chr10	38021530	.	C	CT	4032.76	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=3.565;DP=419;FS=25.547;HRun=0;HaplotypeScore=93.2175;InbreedingCoeff=0.8491;MQ=67.97;MQ0=1;MQRankSum=0.425;QD=12.56;ReadPosRankSum=7.641;VQSLOD=2.0786;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:14.22:0,14,96	1/1:7,0:7:18.60:89,19,0	0/0:16,0:16:12.96:0,13,152	0/0:10,0:9:11.80:0,12,143	0/0:7,0:7:3:0,3,25	1/1:16,0:16:32.80:167,33,0	1/1:36,0:36:78.46:426,78,0	1/1:19,0:19:36.66:248,37,0	0/0:5,0:5:6:0,6,51	1/1:10,0:10:23.89:194,24,0	1/1:11,1:11:22.50:110,22,0	1/1:21,0:21:52.76:267,53,0	0/0:9,0:9:12.44:0,12,100	0/0:13,0:13:14.67:0,15,114	0/0:4,0:4:2.97:0,3,20	0/0:8,0:8:11.97:0,12,100	0/0:11,0:11:13.91:0,14,113	1/1:16,0:16:42.85:222,43,0	1/1:27,0:27:67.19:409,67,0	1/1:28,0:28:61.89:347,62,0	1/1:21,0:21:51.27:268,51,0	0/0:3,0:3:3:0,3,26	1/1:21,0:20:30.39:181,30,0	1/1:28,0:27:68.36:343,68,0	1/1:17,0:17:35.79:185,36,0	1/1:2,9:11:23.79:206,24,0	1/1:26,0:26:56.75:295,57,0	1/1:4,1:5:1.52:76,2,0
chr10	38021823	.	T	TA	7906.08	PASS	AB=0.871;AC=43;AF=0.768;AN=56;BaseQRankSum=-9.042;DP=591;FS=5.353;HRun=12;HaplotypeScore=71.1911;InbreedingCoeff=0.6689;MQ=74.91;MQ0=0;MQRankSum=-1.212;QD=15.62;ReadPosRankSum=0.490;VQSLOD=5.8641;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,35:42:72.01:675,72,0	0/1:6,6:12:19.77:151,0,20	0/1:17,1:15:16.83:17,0,51	0/1:17,0:15:15.73:16,0,55	1/1:6,19:25:49.32:465,49,0	1/1:7,23:30:45.07:438,45,0	1/1:2,8:10:15.02:146,15,0	1/1:5,20:25:54.05:517,54,0	1/1:2,19:21:42.07:409,42,0	1/1:12,19:32:30.04:425,30,0	1/1:5,14:22:48.48:413,48,0	0/0:20,0:20:35.63:0,36,261	1/1:5,19:24:36.04:344,36,0	1/1:4,12:16:30:282,30,0	1/1:2,14:16:36.06:350,36,0	1/1:2,16:18:20.16:358,20,0	1/1:3,21:24:54.56:526,55,0	1/1:4,14:18:23.99:224,24,0	1/1:6,14:21:26.07:397,26,0	1/1:14,13:27:43.31:408,43,0	1/1:3,13:17:13.98:284,14,0	1/1:6,13:20:31.56:260,32,0	0/0:19,0:20:34.78:0,35,246	0/0:17,0:17:35.64:0,36,262	1/1:7,16:24:17.07:315,17,0	0/0:6,1:23:9.37:0,9,87	1/1:5,22:27:51.04:487,51,0	0/0:0,0:5:8.15:0,8,23
chr10	38022066	.	TC	T	10653.27	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-11.220;DP=689;FS=0.605;HRun=6;HaplotypeScore=121.7388;InbreedingCoeff=0.9987;MQ=84.05;MQ0=0;MQRankSum=-4.316;QD=28.64;ReadPosRankSum=0.808;VQSLOD=3.6852;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:94.83:0,95,1061	1/1:1,10:11:27.07:290,27,0	0/0:23,0:23:38.69:0,39,592	0/0:25,0:25:61.46:0,61,696	0/0:22,0:22:63.16:0,63,708	1/1:1,25:26:75.19:806,75,0	1/1:0,25:25:66.17:709,66,0	1/1:6,20:26:60.14:645,60,0	0/0:21,0:21:50.97:0,51,550	1/1:1,28:29:84.21:899,84,0	1/1:1,21:22:54.14:580,54,0	1/1:2,22:24:66.16:707,66,0	0/0:20,0:20:32.80:0,33,523	0/0:21,0:21:63.10:0,63,686	0/0:34,0:34:84.25:0,84,990	0/0:28,0:28:84.23:0,84,989	0/0:18,0:18:41.90:0,42,442	1/1:1,25:26:75.19:805,75,0	1/1:3,19:22:57.14:612,57,0	1/1:3,21:24:63.16:676,63,0	1/1:1,44:45:99:1419,132,0	0/0:24,0:24:63.05:0,63,701	1/1:1,21:22:60.15:644,60,0	1/1:2,20:22:42.04:443,42,0	1/1:1,23:24:66.17:709,66,0	0/0:34,0:34:96.31:0,96,1263	1/1:1,23:24:66.17:709,66,0	0/0:7,0:7:18.06:0,18,228
chr10	38022074	.	CT	C	7382.49	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-11.877;DP=694;FS=3.570;HRun=3;HaplotypeScore=135.9982;InbreedingCoeff=0.9987;MQ=82.39;MQ0=0;MQRankSum=-0.634;QD=32.24;ReadPosRankSum=3.576;VQSLOD=4.1020;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,39:39:99:1224,99,0	0/0:13,0:13:36.12:0,36,473	0/0:23,0:23:46.60:0,47,592	0/0:24,0:24:62.99:0,63,767	1/1:0,21:21:60.04:704,60,0	0/0:26,0:26:78.19:0,78,951	0/0:28,0:28:78.22:0,78,1040	0/0:23,0:23:66.20:0,66,891	1/1:1,21:22:54.17:669,54,0	0/0:29,0:29:71.87:0,72,1107	0/0:21,0:21:54.16:0,54,690	0/0:25,0:25:71.70:0,72,614	1/1:1,19:20:54.16:659,54,0	1/1:0,22:22:63.20:780,63,0	1/1:0,35:35:84.26:1041,84,0	1/1:0,28:28:81.25:1004,81,0	1/1:0,18:18:45.14:557,45,0	0/0:26,0:26:78.06:0,78,965	0/0:20,0:20:60.20:0,60,834	0/0:25,0:25:72.11:0,72,891	0/0:45,0:45:99:0,135,1745	1/1:1,23:24:60.19:744,60,0	0/0:22,0:22:62.04:0,62,544	0/0:24,0:24:50.81:0,51,532	0/0:24,0:24:69.11:0,69,836	0/0:37,0:37:99:0,111,1526	0/0:23,0:23:60.16:0,60,738	0/0:7,0:7:18.06:0,18,259
chr10	38022084	.	T	TC	1687.31	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=1.711;DP=681;FS=0.000;HRun=5;HaplotypeScore=148.5493;InbreedingCoeff=0.9802;MQ=81.51;MQ0=0;MQRankSum=-8.460;QD=23.76;ReadPosRankSum=-1.160;VQSLOD=1.4854;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,99,1054	0/0:12,0:12:30.08:0,30,322	0/0:20,0:20:36.83:0,37,417	0/0:22,0:23:10.02:0,10,427	0/0:24,0:24:51.12:0,51,542	0/0:20,0:20:51.13:0,51,548	0/0:27,0:27:75.17:0,75,796	0/0:24,0:24:57.13:0,57,611	0/0:20,0:20:54.11:0,54,569	0/0:27,0:27:69.17:0,69,740	0/0:21,0:21:60.14:0,60,635	1/1:4,20:24:63.20:812,63,0	0/0:20,0:20:54.13:0,54,578	0/0:23,0:23:63.16:0,63,676	0/0:36,0:36:87.21:0,87,933	0/0:30,0:30:81.16:0,81,852	0/0:19,0:19:48.10:0,48,507	0/0:29,0:29:81.16:0,81,857	0/0:20,0:20:48.11:0,48,515	0/0:24,0:24:63.13:0,63,666	0/0:50,0:50:99:0,138,1464	0/0:24,0:24:72.18:0,72,773	1/1:5,16:21:36.12:467,36,0	1/1:7,19:26:44.94:552,45,0	0/0:21,0:21:60.15:0,60,644	0/0:33,0:33:90.22:0,90,967	0/0:20,0:20:51.12:0,51,544	0/0:6,0:6:18.05:0,18,193
chr10	38022472	.	T	TATG	9172.60	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=19.443;DP=623;FS=0.000;HRun=0;HaplotypeScore=165.3341;InbreedingCoeff=0.9966;MQ=79.08;MQ0=0;MQRankSum=-19.298;QD=39.88;ReadPosRankSum=6.471;VQSLOD=5.7033;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,20:27:54.13:774,54,0	0/0:7,0:7:21.07:0,21,380	0/0:25,0:25:60.59:0,61,1275	0/0:33,0:33:93.32:0,93,1655	1/1:0,33:33:81.25:1176,81,0	0/0:22,0:22:63.21:0,63,1140	0/0:28,0:28:84.29:0,84,1554	0/0:28,0:28:84.28:0,84,1504	1/1:1,15:16:45.15:731,45,0	0/0:26,0:26:78.27:0,78,1428	0/0:25,0:25:72.23:0,72,1301	1/1:1,13:14:42.12:626,42,0	1/1:0,23:23:69.20:1017,69,0	1/1:1,22:24:72.22:1059,72,0	1/1:0,10:10:30.10:457,30,0	1/1:4,12:16:45.04:690,45,0	1/1:0,14:14:42.14:635,42,0	0/0:19,0:19:57.16:0,57,1027	0/0:24,0:24:72.24:0,72,1271	0/0:35,0:35:99:0,102,1832	0/0:39,0:39:99:0,108,1960	1/1:1,25:26:69.21:998,69,0	1/1:1,17:18:51.15:716,51,0	1/1:0,9:9:21.07:295,21,0	0/0:21,0:21:63.21:0,63,1146	0/0:27,0:27:78.26:0,78,1426	0/0:29,0:29:87.29:0,87,1597	0/0:5,0:5:15.05:0,15,280
chr10	38022474	.	AC	A	2293.03	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=18.173;DP=608;FS=0.321;HRun=1;HaplotypeScore=162.9091;InbreedingCoeff=0.9852;MQ=79.53;MQ0=0;MQRankSum=-18.206;QD=10.28;ReadPosRankSum=8.128;VQSLOD=1.1744;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,20:24:30.47:180,30,0	0/0:7,0:7:21.07:0,21,336	0/0:25,0:25:71.98:0,72,1117	0/0:33,0:33:74.68:0,75,1425	1/1:0,33:33:67.48:326,67,0	0/0:20,0:20:60.19:0,60,936	0/0:29,0:29:87.30:0,87,1385	0/0:28,0:28:84.26:0,84,1297	1/1:1,15:16:43.01:237,43,0	0/0:26,0:26:78.25:0,78,1207	0/0:25,0:25:72.24:0,72,1139	1/1:1,13:14:32.10:182,32,0	1/1:0,23:23:58.69:295,59,0	1/1:2,22:24:58.17:299,58,0	1/1:0,10:10:26.58:130,27,0	1/1:2,12:14:35.41:232,35,0	1/1:0,14:14:33.82:182,34,0	0/0:19,0:19:57.18:0,57,887	0/0:23,0:23:69.22:0,69,1063	0/0:33,0:33:99:0,99,1553	0/0:38,0:38:99:0,108,1724	1/1:0,25:25:46.75:249,47,0	1/1:0,17:17:27.11:154,27,0	1/1:0,9:9:7.28:55,7,0	0/0:20,0:20:60.20:0,60,957	0/0:25,0:25:75.24:0,75,1174	0/0:29,0:29:87.30:0,87,1391	0/0:5,0:5:15.05:0,15,239
chr10	38022884	.	C	CAA	7616.80	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=4.751;DP=524;FS=6.399;HRun=4;HaplotypeScore=121.8817;InbreedingCoeff=0.9741;MQ=68.81;MQ0=13;MQRankSum=-5.089;QD=17.75;ReadPosRankSum=-0.945;VQSLOD=1.4489;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:27:61.55:396,62,0	1/1:10,0:10:26.83:210,27,0	0/0:31,0:19:29.67:0,30,334	0/0:31,0:18:29.83:0,30,311	1/1:22,0:22:45:329,45,0	1/1:16,0:17:42.48:344,42,0	1/1:24,0:21:50.47:367,50,0	1/1:23,0:21:53.84:449,54,0	1/1:14,0:14:41.54:330,42,0	1/1:23,0:22:63.92:526,64,0	1/1:7,0:7:11.94:96,12,0	1/1:17,0:14:35.51:246,36,0	1/1:18,0:18:47.67:340,48,0	1/1:11,0:11:21.41:196,21,0	1/1:17,3:20:38.74:292,39,0	1/1:23,0:22:46.37:486,46,0	1/1:14,0:14:13.84:186,14,0	1/1:11,0:11:26.99:243,27,0	1/1:14,0:13:30.93:318,31,0	1/1:26,0:26:74.48:579,74,0	1/1:20,0:19:37.78:371,38,0	1/1:24,0:20:46.99:339,47,0	1/1:10,0:10:26.75:200,27,0	1/1:20,0:18:11.76:89,12,0	1/1:17,0:15:34.04:268,34,0	0/0:21,0:21:51.99:0,52,396	1/1:15,1:15:37.61:416,38,0	0/0:12,0:12:29.72:0,30,210
chr10	38022939	.	TGAGA	T	4826.59	PASS	AB=1.000;AC=47;AF=0.839;AN=56;BaseQRankSum=2.901;DP=521;FS=0.755;HRun=0;HaplotypeScore=143.6289;InbreedingCoeff=0.6149;MQ=43.73;MQ0=39;MQRankSum=-3.183;QD=12.41;ReadPosRankSum=0.556;VQSLOD=4.5697;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:24:11.09:48,0,11	1/1:2,3:4:2.94:18,3,0	0/0:32,0:7:10.73:0,11,118	0/0:59,0:14:28.61:0,29,227	1/1:17,0:17:5.85:69,6,0	1/1:5,3:11:10.02:134,10,0	1/1:16,6:20:29.72:468,30,0	1/1:8,11:19:25.74:403,26,0	1/1:18,0:16:18.45:246,18,0	1/1:11,6:16:30.10:497,30,0	1/1:7,3:8:6.02:100,6,0	1/1:14,0:11:12.79:106,13,0	1/1:14,0:13:26.95:395,27,0	1/1:14,0:14:20.98:226,21,0	1/1:22,0:20:11.86:131,12,0	1/1:24,0:23:26.67:357,27,0	1/1:12,0:10:5.73:68,6,0	1/1:8,3:11:11.07:151,11,0	1/1:11,9:20:33.11:526,33,0	1/1:12,1:12:5.75:98,6,0	1/1:13,10:22:17.92:299,18,0	1/1:18,0:16:5.65:28,6,0	1/1:13,0:13:0.88:2,1,0	1/1:21,0:18:2.88:7,3,0	1/1:7,6:11:9.03:150,9,0	0/0:25,0:25:8.18:0,8,995	1/1:6,6:12:17.92:299,18,0	0/0:15,0:11:30.06:0,30,636
chr10	38022947	.	A	AGGT	417.35	PASS	AB=0.882;AC=7;AF=0.125;AN=56;BaseQRankSum=5.344;DP=554;FS=4.033;HRun=0;HaplotypeScore=180.0585;InbreedingCoeff=0.3502;MQ=48.10;MQ0=28;MQRankSum=-4.315;QD=5.28;ReadPosRankSum=-1.289;VQSLOD=2.5020;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:19,5:24:23.60:280,0,24	0/0:4,0:4:3.01:0,3,49	0/0:48,0:16:12.99:0,13,446	0/0:70,0:20:45.20:0,45,546	0/0:16,0:16:8.59:0,9,49	0/1:12,0:12:27.13:27,0,178	0/0:21,0:20:10.71:0,11,258	0/0:27,0:26:68.32:0,68,735	0/0:16,0:15:11.58:0,12,93	0/0:26,0:25:75.05:0,75,900	0/0:11,0:9:9:0,9,78	1/1:12,0:12:19.66:166,20,0	0/0:14,0:14:6.19:0,6,176	0/0:11,0:11:19.85:0,20,135	0/0:20,0:20:14.30:0,14,112	0/0:24,0:23:26.07:0,26,369	0/0:9,0:8:12.03:0,12,145	0/0:10,0:10:23.79:0,24,311	0/0:20,0:19:53.98:0,54,584	0/0:13,0:12:14.98:0,15,195	0/0:28,0:27:27.35:0,27,278	0/0:18,0:17:9:0,9,88	1/1:13,0:13:5.80:48,6,0	0/1:14,4:17:29.53:30,0,35	0/0:15,0:13:12.01:0,12,131	0/0:25,0:25:72.23:0,72,1156	0/0:13,0:13:33.02:0,33,374	0/0:15,0:13:36.12:0,36,630
chr10	38022955	.	A	AGGG	235.16	PASS	AB=0.923;AC=8;AF=0.143;AN=56;BaseQRankSum=4.080;DP=545;FS=3.684;HRun=1;HaplotypeScore=189.1750;InbreedingCoeff=0.0808;MQ=53.24;MQ0=21;MQRankSum=-5.924;QD=2.35;ReadPosRankSum=2.118;VQSLOD=-0.6848;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:22.43:0,22,232	0/0:3,0:3:3.01:0,3,50	0/0:52,0:20:46.72:0,47,687	0/0:74,0:24:36.29:0,36,588	0/0:10,0:10:7.65:0,8,34	0/0:14,0:14:19.24:0,19,212	0/0:20,0:20:38.51:0,39,377	0/0:31,0:31:29.84:0,30,971	0/1:14,0:14:6.96:51,0,7	0/0:30,0:29:46.43:0,46,893	0/0:10,0:9:8.81:0,9,104	0/0:13,0:13:22.98:0,23,189	0/1:15,1:15:16.80:31,0,17	0/1:11,0:12:24.30:45,0,24	0/1:16,0:17:7.16:51,0,7	0/1:19,3:23:85.86:105,0,86	1/1:8,0:7:5.47:62,5,0	0/1:8,0:9:22.47:22,0,68	0/0:21,0:20:39.18:0,39,435	0/0:11,0:10:15.03:0,15,202	0/0:27,0:26:29.42:0,29,320	0/0:14,0:14:8.98:0,9,89	0/0:13,0:13:2.32:0,2,38	0/0:17,0:16:5.60:0,6,47	0/0:14,0:13:11.97:0,12,99	0/0:26,0:26:60.82:0,61,943	0/0:13,0:13:25.51:0,26,239	0/0:14,0:13:39.13:0,39,669
chr10	38022958	.	GAGA	G	1027.85	PASS	AB=0.988;AC=27;AF=0.482;AN=56;BaseQRankSum=6.111;DP=510;FS=4.533;HRun=0;HaplotypeScore=169.1528;InbreedingCoeff=-0.2337;MQ=55.72;MQ0=19;MQRankSum=-4.949;QD=3.13;ReadPosRankSum=8.455;VQSLOD=1.2526;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:21,0:21:25.88:32,0,26	0/0:3,0:3:2.96:0,3,19	0/0:53,0:21:59.94:0,60,775	0/0:75,0:25:50.07:0,50,646	0/1:7,0:7:1.13:10,0,1	0/1:12,0:12:23.88:24,0,52	0/1:19,0:19:13.85:100,0,14	0/1:28,0:28:26.78:27,0,509	1/1:11,0:11:9.32:99,9,0	0/1:26,0:25:56.24:56,0,423	0/1:6,0:6:16.89:17,0,28	0/1:13,0:13:23.83:87,0,24	1/1:14,0:13:18.57:165,19,0	1/1:12,0:12:10.30:58,10,0	1/1:14,1:15:11.92:71,12,0	0/1:19,1:19:43:126,0,43	0/1:7,0:6:9.42:18,0,9	0/1:7,0:7:55.75:58,0,56	0/1:18,1:18:89.96:90,0,171	0/1:8,1:8:6.87:7,0,105	0/1:27,0:26:50.14:50,0,84	0/0:12,0:12:7.66:0,8,36	0/1:13,0:13:14.90:22,0,15	1/1:17,0:16:0.98:4,1,0	0/1:13,0:13:23.81:24,0,59	0/0:23,0:23:40.71:0,41,1090	0/1:12,0:12:51.53:52,0,84	0/0:16,0:15:45.11:0,45,853
chr10	38022959	.	AGAGGT	A	1913.01	PASS	AB=1.000;AC=25;AF=0.446;AN=56;BaseQRankSum=9.973;DP=509;FS=6.819;HRun=0;HaplotypeScore=177.3080;InbreedingCoeff=0.7277;MQ=55.73;MQ0=18;MQRankSum=-9.339;QD=10.12;ReadPosRankSum=0.987;VQSLOD=2.2134;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,6:21:34.50:273,34,0	0/0:3,0:3:3.01:0,3,44	0/0:53,0:21:59.23:0,59,1160	0/0:75,0:25:43.02:0,43,832	1/1:7,0:7:11.38:72,11,0	0/0:12,0:12:11.82:0,12,147	0/1:19,0:19:15.71:16,0,197	0/0:29,0:29:71.89:0,72,1205	1/1:11,0:11:20.28:208,20,0	0/0:26,0:25:73.04:0,73,1006	0/0:6,0:6:11.82:0,12,109	1/1:8,6:14:25.60:331,26,0	1/1:14,0:13:29.24:333,29,0	1/1:12,0:12:23.18:184,23,0	1/1:16,0:16:22.78:193,23,0	1/1:20,0:19:3.65:270,4,0	1/1:6,0:6:6.27:66,6,0	0/1:7,0:7:2.13:2,0,130	0/0:19,0:18:39.14:0,39,499	0/0:9,0:8:17.71:0,18,247	0/0:26,0:25:26.55:0,27,295	0/1:12,0:12:5.73:9,0,6	1/1:6,7:13:8.81:115,9,0	1/1:12,3:16:5.10:48,5,0	0/0:13,0:13:26.88:0,27,318	0/0:22,0:22:52.13:0,52,1405	0/0:11,0:11:16.01:0,16,243	0/0:16,0:15:42.11:0,42,1055
chr10	38022961	.	AGGT	A	1804.13	PASS	AB=0.798;AC=25;AF=0.446;AN=56;BaseQRankSum=10.429;DP=514;FS=6.543;HRun=0;HaplotypeScore=170.3071;InbreedingCoeff=0.7414;MQ=57.22;MQ0=16;MQRankSum=-8.792;QD=9.60;ReadPosRankSum=0.890;VQSLOD=2.7346;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:21:25.03:192,25,0	0/0:4,0:4:6.02:0,6,104	0/0:53,0:21:56.84:0,57,1065	0/0:77,0:27:50.17:0,50,979	1/1:3,5:8:6.44:72,6,0	0/0:12,0:13:12.95:0,13,228	0/1:17,1:18:14.67:15,0,204	0/0:29,0:29:78.06:0,78,1268	1/1:2,9:11:20.38:216,20,0	0/0:26,0:26:76.01:0,76,1018	0/0:6,0:6:11.78:0,12,106	1/1:12,0:14:21.41:248,21,0	1/1:5,8:13:29.47:338,29,0	1/1:5,7:12:23.30:191,23,0	1/1:6,10:16:22.78:200,23,0	1/1:10,10:19:9.28:285,9,0	1/1:3,3:6:6.51:69,7,0	0/1:6,0:7:22.08:22,0,126	0/0:20,0:19:43.38:0,43,566	0/0:10,0:9:20.63:0,21,306	0/0:24,0:24:26.53:0,27,289	0/1:3,9:12:0.04:13,0,0	1/1:12,0:13:8.64:101,9,0	1/1:16,0:16:7.99:51,8,0	0/0:13,0:13:26.83:0,27,315	0/0:24,0:24:56.50:0,57,1199	0/0:11,0:11:13.11:0,13,233	0/0:15,0:14:42.11:0,42,877
chr10	38022964	.	T	TGA	4015.92	PASS	AB=0.963;AC=25;AF=0.446;AN=56;BaseQRankSum=9.929;DP=509;FS=5.581;HRun=0;HaplotypeScore=172.4975;InbreedingCoeff=0.8734;MQ=61.46;MQ0=12;MQRankSum=-7.954;QD=16.87;ReadPosRankSum=-0.298;VQSLOD=3.2992;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,8:20:33.11:539,33,0	0/0:5,0:5:5.98:0,6,82	0/0:45,0:20:29.97:0,30,584	0/1:74,0:31:19.10:19,0,509	1/1:5,3:8:15.03:252,15,0	0/0:13,0:13:24.01:0,24,301	0/0:19,0:19:34.41:0,34,476	0/0:30,0:30:81.26:0,81,1086	1/1:11,1:12:21.07:303,21,0	0/0:27,0:27:75.25:0,75,1009	0/0:8,0:8:11.89:0,12,139	1/1:12,3:15:23.96:481,24,0	1/1:11,2:13:30.10:407,30,0	1/1:9,2:11:24.08:385,24,0	1/1:12,4:16:23.29:344,23,0	1/1:14,3:17:35.97:546,36,0	1/1:4,3:7:11.25:134,11,0	0/0:7,0:7:13.86:0,14,170	0/0:20,0:19:54.17:0,54,712	0/0:10,0:9:21.07:0,21,286	0/0:24,0:23:27.01:0,27,369	1/1:11,2:13:9.03:155,9,0	1/1:11,4:15:21.07:354,21,0	1/1:10,4:14:5.98:97,6,0	0/0:14,0:14:27.09:0,27,347	0/0:23,0:23:63.15:0,63,824	0/0:13,0:13:30.03:0,30,352	0/0:13,0:13:36.12:0,36,492
chr10	38023024	.	G	GAGCA	18182.82	PASS	AB=1.000;AC=44;AF=0.786;AN=56;BaseQRankSum=-7.967;DP=529;FS=6.275;HRun=0;HaplotypeScore=182.8701;InbreedingCoeff=0.2369;MQ=49.83;MQ0=1;MQRankSum=1.101;QD=36.44;ReadPosRankSum=0.553;VQSLOD=4.7084;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,16:23:38.97:615,39,0	1/1:0,4:5:9.03:236,9,0	0/0:18,0:12:2.78:0,3,210	0/1:31,0:13:22.62:23,0,220	0/0:7,0:12:21.06:0,21,138	1/1:3,14:18:48.13:1074,48,0	1/1:7,16:24:51.01:917,51,0	1/1:7,17:24:66.16:1464,66,0	0/1:7,0:10:2.18:2,0,165	1/1:10,24:34:90.29:2238,90,0	1/1:5,7:13:29.88:420,30,0	1/1:4,20:22:50.93:1013,51,0	0/1:5,0:19:37.56:38,0,57	0/1:10,0:12:20.76:40,0,21	0/1:13,0:14:63.42:63,0,80	0/1:11,0:13:4.31:4,0,137	0/1:5,0:6:6.10:30,0,6	1/1:2,11:13:33.11:899,33,0	1/1:9,4:12:24.08:550,24,0	1/1:1,17:18:51.14:1224,51,0	1/1:4,38:42:56.80:1432,57,0	0/1:3,0:20:4.72:5,0,112	1/1:3,19:22:35.99:517,36,0	1/1:5,11:15:14.73:324,15,0	1/1:6,15:21:42.14:927,42,0	1/1:2,29:31:93.30:2366,93,0	1/1:1,18:22:54.10:1353,54,0	1/1:0,6:6:15.04:411,15,0
chr10	38023026	.	G	GTGAC	3538.42	PASS	AB=0.967;AC=32;AF=0.571;AN=56;BaseQRankSum=3.365;DP=475;FS=15.802;HRun=0;HaplotypeScore=198.3837;InbreedingCoeff=-0.3712;MQ=49.01;MQ0=1;MQRankSum=-1.160;QD=8.51;ReadPosRankSum=9.300;VQSLOD=0.1924;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:18,0:18:68.81:92,0,69	0/1:5,0:5:7.01:26,0,7	0/0:16,0:11:6.18:0,6,288	0/0:32,0:14:3.24:0,3,335	1/1:9,1:10:16.25:95,16,0	0/1:17,0:17:49.27:108,0,49	0/1:19,0:19:74.04:122,0,74	0/1:22,0:20:39.85:203,0,40	0/1:9,0:9:16.86:95,0,17	0/1:29,0:30:20.81:281,0,21	0/0:10,0:10:3.35:0,3,82	0/1:21,0:19:28.61:219,0,29	0/1:14,2:16:24.64:135,0,25	1/1:7,0:7:11.83:184,12,0	0/1:9,2:11:22.89:342,0,23	0/1:9,2:10:18.57:130,0,19	1/1:4,1:5:6.47:149,6,0	0/1:13,0:13:8.41:171,0,8	0/1:9,0:9:41.13:44,0,41	0/1:18,0:18:0.54:126,0,1	0/1:41,0:41:73.41:149,0,73	1/1:18,1:19:18.09:168,18,0	0/1:23,0:23:63.37:63,0,75	0/1:14,0:13:25.21:66,0,25	1/1:16,0:17:1.20:67,1,0	1/1:32,0:31:11.25:245,11,0	0/1:21,0:22:3.84:210,0,4	1/1:6,0:6:12.55:49,13,0
chr10	38023029	.	TGA	T	1488.82	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=7.348;DP=496;FS=14.211;HRun=0;HaplotypeScore=197.2489;InbreedingCoeff=0.9028;MQ=49.07;MQ0=1;MQRankSum=-3.490;QD=16.73;ReadPosRankSum=0.223;VQSLOD=2.7845;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:24.20:0,24,209	0/0:5,0:5:3.62:0,4,130	0/0:18,0:12:13.48:0,13,391	0/0:35,0:15:25.70:0,26,382	1/1:7,4:11:27.01:344,27,0	0/0:18,0:18:46.60:0,47,585	0/0:21,0:21:34.32:0,34,295	0/0:23,0:21:53.43:0,53,527	1/1:4,5:9:23.72:258,24,0	0/0:30,0:30:81.48:0,81,1018	0/0:11,0:11:25.76:0,26,230	0/0:23,0:21:9.60:0,10,216	1/1:16,0:16:9.29:89,9,0	1/1:8,0:8:5.65:81,6,0	1/1:6,5:11:26.29:261,26,0	1/1:8,3:10:23.40:228,23,0	1/1:3,2:5:4.84:77,5,0	0/0:13,0:13:33.85:0,34,414	0/0:10,0:10:26.62:0,27,285	0/0:18,0:18:40.87:0,41,524	0/0:44,0:44:78.03:0,78,933	1/1:18,0:18:29.96:346,30,0	0/0:24,0:24:22.17:0,22,149	0/0:14,0:13:12.96:0,13,91	0/0:17,0:17:30.03:0,30,432	0/0:33,0:32:93.63:0,94,1190	0/0:23,0:23:56.87:0,57,718	0/0:7,0:7:18.03:0,18,233
chr10	38023124	.	A	AAG	18620.22	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-5.423;DP=735;FS=14.486;HRun=0;HaplotypeScore=182.7543;InbreedingCoeff=0.7567;MQ=74.00;MQ0=6;MQRankSum=-5.732;QD=32.61;ReadPosRankSum=3.174;VQSLOD=5.6329;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,16:27:51.17:816,51,0	1/1:3,6:10:24.08:389,24,0	0/0:69,0:43:1.07:0,1,418	0/0:93,0:52:15.37:0,15,444	1/1:6,16:22:46.04:724,46,0	1/1:5,19:24:59.99:901,60,0	1/1:8,24:32:43.74:1202,44,0	1/1:8,31:39:97.55:1511,98,0	1/1:1,9:10:24.08:394,24,0	1/1:8,15:23:57.14:890,57,0	1/1:12,7:19:26.73:388,27,0	1/1:4,16:20:48.16:764,48,0	1/1:3,11:14:30.10:495,30,0	1/1:4,17:21:48.16:793,48,0	1/1:6,24:29:68.90:1059,69,0	1/1:5,20:24:36.12:593,36,0	1/1:1,12:13:36.12:580,36,0	1/1:6,7:13:27.08:420,27,0	1/1:13,8:22:7.12:566,7,0	1/1:6,14:20:6.79:616,7,0	1/1:11,19:30:55.43:831,55,0	1/1:9,15:24:48.16:779,48,0	1/1:6,11:17:36.12:583,36,0	1/1:5,17:22:12.04:184,12,0	1/1:9,14:23:17.25:683,17,0	1/1:17,25:42:68.56:1395,69,0	1/1:2,13:15:39.13:630,39,0	1/1:3,9:12:27.09:435,27,0
chr10	38023155	.	T	TGA	3907.93	PASS	AB=0.845;AC=27;AF=0.482;AN=56;BaseQRankSum=-2.145;DP=753;FS=0.000;HRun=0;HaplotypeScore=255.1550;InbreedingCoeff=0.4287;MQ=75.10;MQ0=15;MQRankSum=-1.042;QD=11.67;ReadPosRankSum=-1.581;VQSLOD=2.5488;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:16,3:19:27.07:362,27,0	1/1:7,2:9:15.03:201,15,0	0/0:112,0:43:9.15:0,9,166	0/0:142,0:53:10.84:0,11,232	0/0:15,0:15:9.42:0,9,69	0/1:13,7:20:0.56:222,0,1	0/1:22,8:30:37.05:291,0,37	1/1:31,2:33:39.55:491,40,0	1/1:7,0:7:1.55:4,2,0	1/1:12,3:14:29.99:384,30,0	0/1:14,6:20:12.17:197,0,12	0/0:11,0:13:5.41:0,5,15	0/1:17,0:16:0.49:0,0,114	0/0:18,0:18:6.24:0,6,77	0/0:24,0:24:14.54:0,15,123	0/0:21,1:21:10.50:0,10,118	0/0:14,0:14:10.54:0,11,114	0/1:11,2:13:21.57:131,0,22	1/1:19,4:23:8.10:429,8,0	1/1:19,7:26:34.41:406,34,0	1/1:17,2:19:7.24:59,7,0	0/1:24,0:24:49.57:50,0,99	1/1:13,0:16:10.03:63,10,0	0/0:12,0:12:0.28:0,0,7	0/1:18,9:27:10.04:132,0,10	0/0:33,0:32:25.78:0,26,668	1/1:9,8:17:36.09:487,36,0	0/0:10,0:10:21.02:0,21,221
chr10	38023167	.	AGAGC	A	2418.53	PASS	AB=0.956;AC=29;AF=0.518;AN=56;BaseQRankSum=-3.697;DP=759;FS=24.502;HRun=0;HaplotypeScore=262.1589;InbreedingCoeff=-0.7879;MQ=68.97;MQ0=26;MQRankSum=0.327;QD=3.22;ReadPosRankSum=-8.816;VQSLOD=-0.5560;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:21,0:21:18.22:120,0,18	0/1:8,3:11:16.15:110,0,16	0/1:110,0:31:41.40:41,0,45	0/1:150,0:49:64.74:107,0,65	0/1:14,0:14:28.72:29,0,29	0/1:17,1:18:59.12:85,0,59	0/1:31,0:31:47.34:47,0,111	0/1:34,0:33:24.44:386,0,24	1/1:6,0:6:5.94:43,6,0	0/1:15,3:17:58.97:165,0,59	0/1:20,0:20:24.15:24,0,119	0/1:9,2:10:13.01:73,0,13	0/1:14,0:12:26.59:27,0,125	0/1:17,0:17:73.13:95,0,73	0/1:17,2:19:46.62:47,0,83	0/1:19,0:18:71.48:71,0,98	0/1:16,0:16:87.58:109,0,88	0/1:12,0:12:7.28:7,0,97	0/1:26,1:27:99:173,0,119	0/1:23,4:27:49.76:142,0,50	0/1:17,4:20:8.96:60,0,9	0/1:29,0:26:95.24:162,0,95	0/1:15,0:15:11.18:117,0,11	1/1:7,1:8:5.98:47,6,0	0/1:28,1:28:71.36:80,0,71	0/1:33,1:33:99:132,0,330	0/1:17,1:18:68.77:69,0,136	0/0:9,0:9:13:0,13,157
chr10	38023169	.	AGC	A	3598.55	PASS	AB=0.999;AC=40;AF=0.714;AN=56;BaseQRankSum=-4.999;DP=725;FS=11.246;HRun=0;HaplotypeScore=235.0250;InbreedingCoeff=-0.4147;MQ=68.01;MQ0=25;MQRankSum=-0.172;QD=4.96;ReadPosRankSum=-4.878;VQSLOD=1.0143;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:20:19.04:142,19,0	1/1:11,0:11:12.57:127,13,0	0/1:102,0:29:40.15:41,0,40	0/1:138,0:42:90.77:91,0,100	1/1:13,1:14:5.15:64,5,0	0/1:17,0:17:31.66:122,0,32	0/1:29,0:29:43.94:106,0,44	1/1:35,0:34:40.50:496,41,0	1/1:6,0:6:5.94:43,6,0	1/1:19,0:18:14.15:242,14,0	0/1:20,0:20:56.83:70,0,57	0/1:11,0:10:4.59:49,0,5	0/1:12,0:10:20.21:44,0,20	1/1:17,0:17:5.24:108,5,0	0/1:17,0:17:1.65:62,0,2	0/1:18,0:17:10.33:51,0,10	1/1:15,0:15:16.79:165,17,0	0/1:11,0:11:22.17:22,0,58	0/1:26,0:24:52.58:247,0,53	1/1:25,0:25:9.26:190,9,0	1/1:20,0:19:14.83:123,15,0	1/1:25,4:26:9.24:298,9,0	0/1:15,0:15:5.10:49,0,5	1/1:6,1:7:1.49:22,1,0	0/1:28,0:27:35:81,0,35	0/1:32,0:31:52.05:365,0,52	0/1:19,0:19:26.45:106,0,26	0/1:9,0:9:47.31:72,0,47
chr10	38023171	.	CGA	C	717.23	PASS	AB=0.875;AC=5;AF=0.093;AN=54;BaseQRankSum=-4.622;DP=737;FS=0.653;HRun=0;HaplotypeScore=250.9343;InbreedingCoeff=0.2395;MQ=66.29;MQ0=25;MQRankSum=-0.349;QD=7.97;ReadPosRankSum=-0.755;VQSLOD=2.7314;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:21:9.64:0,10,83	0/0:9,0:10:0.67:0,1,21	0/0:99,0:26:8.02:0,8,41	0/0:142,0:44:13.25:0,13,135	0/0:14,0:14:7.65:0,8,46	0/0:18,0:18:6.45:0,6,48	0/0:27,0:31:14.25:0,14,74	0/0:37,0:36:11.02:0,11,152	./.	0/0:20,0:19:22.82:0,23,115	0/0:17,0:21:1.31:0,1,71	0/0:11,0:10:8.78:0,9,79	0/0:12,0:11:20.65:0,21,154	0/0:17,0:17:8.91:0,9,90	0/0:18,0:18:12.58:0,13,104	0/0:16,0:17:16.47:0,16,119	0/0:15,0:15:12.46:0,12,98	0/0:11,0:12:18:0,18,119	0/0:25,0:24:15.27:0,15,151	0/0:24,0:26:8.85:0,9,39	0/1:21,0:20:0.25:0,0,1	0/1:26,0:25:30.58:31,0,144	0/0:14,0:14:3.25:0,3,75	0/0:6,0:6:5.91:0,6,38	0/0:23,0:26:4.48:0,4,75	1/1:16,14:31:53.61:636,54,0	0/0:17,0:20:24.01:0,24,187	0/1:5,4:9:9.83:162,0,10
chr10	38023174	.	G	GCA	1034.98	PASS	AB=0.992;AC=17;AF=0.304;AN=56;BaseQRankSum=4.720;DP=734;FS=6.186;HRun=0;HaplotypeScore=252.1042;InbreedingCoeff=0.2780;MQ=63.51;MQ0=30;MQRankSum=-0.368;QD=3.26;ReadPosRankSum=-0.636;VQSLOD=1.9647;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:19,0:19:28.41:42,0,28	0/0:10,0:10:17.68:0,18,143	0/0:102,0:22:24.04:0,24,290	0/1:144,0:44:6.15:6,0,464	0/1:13,0:13:5.91:54,0,6	0/0:17,0:16:24.34:0,24,193	0/0:32,0:31:30.72:0,31,280	0/0:38,0:37:95.87:0,96,1066	1/1:6,0:6:6.02:84,6,0	0/0:20,0:19:53.68:0,54,570	0/0:21,0:21:10.13:0,10,180	1/1:10,0:9:11.67:73,12,0	0/1:13,0:11:38.88:39,0,43	1/1:14,1:15:13.25:158,13,0	0/1:17,0:17:0.52:133,0,1	0/1:17,0:16:15.90:53,0,16	0/1:16,0:16:75.26:166,0,75	0/0:12,0:12:27.74:0,28,297	0/0:27,0:24:62.87:0,63,646	0/0:26,0:26:11.59:0,12,234	0/0:23,0:22:12.51:0,13,179	0/1:25,2:24:99:210,0,111	1/1:12,1:13:15.17:131,15,0	0/1:6,0:6:17.35:61,0,17	0/0:28,0:27:22.81:0,23,305	0/0:33,0:32:69.59:0,70,780	0/0:20,0:20:40.74:0,41,322	0/0:8,0:8:23.43:0,23,191
chr10	38023176	.	G	GCA	793.25	PASS	AB=0.996;AC=16;AF=0.286;AN=56;BaseQRankSum=5.467;DP=758;FS=0.966;HRun=0;HaplotypeScore=258.6989;InbreedingCoeff=0.3260;MQ=61.86;MQ0=31;MQRankSum=0.720;QD=4.22;ReadPosRankSum=-0.727;VQSLOD=2.6809;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:19,0:19:8.83:9,0,49	0/0:10,0:10:16.19:0,16,165	0/0:105,0:22:20.88:0,21,303	0/0:147,0:45:31.99:0,32,523	1/1:14,1:15:13.51:96,14,0	0/0:17,0:16:24.93:0,25,251	0/0:34,0:33:30.77:0,31,318	0/0:36,0:35:99:0,99,1243	1/1:7,0:7:5.37:35,5,0	0/0:20,0:19:53.95:0,54,636	0/0:22,0:22:10.01:0,10,201	0/1:10,0:9:10.41:14,0,10	0/1:16,0:14:11.98:139,0,12	1/1:14,0:14:17.67:97,18,0	1/1:19,2:21:9.69:138,10,0	0/1:17,0:16:4.20:70,0,4	0/1:17,0:17:63.33:138,0,63	0/0:12,0:12:27.75:0,28,319	0/0:26,0:23:60.80:0,61,734	0/0:26,0:26:13.60:0,14,311	0/0:24,0:23:11.80:0,12,193	0/1:27,1:25:99:171,0,111	0/1:13,0:14:18.65:21,0,19	0/1:10,0:10:5.18:38,0,5	0/0:28,0:27:22.66:0,23,315	0/0:35,0:34:87.96:0,88,858	0/0:19,0:19:40.82:0,41,394	0/0:7,0:7:20.96:0,21,201
chr10	38023194	.	GCA	G	598.69	PASS	AB=0.830;AC=16;AF=0.286;AN=56;BaseQRankSum=1.100;DP=699;FS=20.394;HRun=0;HaplotypeScore=229.4350;InbreedingCoeff=-0.3885;MQ=51.00;MQ0=34;MQRankSum=-1.690;QD=1.50;ReadPosRankSum=-1.676;VQSLOD=1.1116;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:17,1:18:14.53:0,15,217	0/1:4,2:6:11.34:33,0,11	0/0:95,7:22:6.16:0,6,324	0/1:115,2:30:33.89:34,0,378	0/0:14,0:14:14.68:0,15,209	0/1:9,7:15:44.58:59,0,45	0/0:29,4:32:25.31:0,25,311	0/1:33,3:36:51.47:51,0,1097	0/0:6,0:6:2.74:0,3,12	0/1:16,4:19:82.60:83,0,359	0/1:10,10:20:38.29:38,0,101	0/0:15,0:15:13.35:0,13,199	0/0:14,0:13:26.75:0,27,346	0/1:11,0:12:7.97:8,0,154	0/0:11,0:19:9.60:0,10,288	0/1:16,0:16:5.98:6,0,292	0/1:13,3:18:66.83:67,0,349	0/1:11,2:13:33.46:33,0,296	0/1:14,5:17:99:128,0,418	0/0:17,2:19:8.20:0,8,140	0/0:16,2:17:14.77:0,15,156	0/0:22,1:21:49.77:0,50,635	0/1:8,1:13:15.27:15,0,67	0/1:6,0:9:0.35:0,0,83	0/1:20,7:26:45.28:45,0,103	0/1:34,0:33:32.31:32,0,580	0/1:15,4:19:99:115,0,225	0/0:12,0:12:23.96:0,24,268
chr10	38023208	.	GTGAGAGA	G	1727.81	PASS	AB=0.981;AC=20;AF=0.357;AN=56;BaseQRankSum=10.671;DP=656;FS=6.941;HRun=0;HaplotypeScore=222.9766;InbreedingCoeff=-0.4915;MQ=47.01;MQ0=38;MQRankSum=-5.334;QD=5.38;ReadPosRankSum=-1.099;VQSLOD=1.5952;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:22:34.84:35,0,294	0/1:5,0:5:46.30:68,0,46	0/0:80,0:25:47.45:0,47,684	0/0:117,0:25:5.33:0,5,547	0/0:15,0:15:12.02:0,12,197	0/1:12,0:11:39.61:70,0,40	0/1:32,0:32:99:149,0,237	0/0:29,0:29:58.73:0,59,1431	1/1:10,0:9:2.90:16,3,0	0/1:17,0:16:99:182,0,248	0/1:11,2:13:39.48:39,0,83	0/1:18,0:17:23.77:24,0,409	0/0:14,0:12:1.50:0,1,388	0/1:10,0:10:96.40:102,0,96	0/1:21,0:20:99:219,0,206	0/0:16,0:16:0.57:0,1,229	0/1:18,0:18:99:143,0,435	0/1:13,1:14:99:212,0,124	0/1:14,0:14:72.55:73,0,519	0/1:18,1:19:71.65:132,0,72	0/0:16,0:16:23.40:0,23,270	0/1:27,0:23:35.01:35,0,619	0/1:15,0:13:43.74:44,0,190	0/1:10,0:9:52.50:52,0,84	0/1:28,1:28:95.07:120,0,95	0/0:31,0:30:70.31:0,70,2732	0/1:14,1:15:95.19:169,0,95	0/0:11,0:11:33.11:0,33,1184
chr10	38023214	.	GA	G	1345.45	PASS	AB=0.925;AC=21;AF=0.375;AN=56;BaseQRankSum=7.047;DP=672;FS=2.077;HRun=2;HaplotypeScore=186.3515;InbreedingCoeff=-0.4407;MQ=45.21;MQ0=43;MQRankSum=-3.060;QD=3.81;ReadPosRankSum=-1.827;VQSLOD=-0.2878;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:22,2:24:48.04:48,0,150	0/1:5,0:5:26.57:27,0,34	0/0:82,0:23:46.91:0,47,536	0/0:122,0:23:42.45:0,42,516	0/0:13,0:13:8.06:0,8,86	0/1:10,2:11:5.91:73,0,6	0/1:31,2:33:64.85:65,0,123	0/0:23,1:24:31.34:0,31,838	1/1:12,1:12:9.01:87,9,0	0/1:18,1:18:12.60:13,0,224	0/1:11,1:12:29.01:42,0,29	0/1:17,1:17:7.97:8,0,279	0/1:12,1:11:54.64:55,0,145	0/1:10,1:11:61.59:82,0,62	0/1:23,0:21:99:215,0,141	0/0:15,2:16:8.82:0,9,148	0/1:16,3:19:99:171,0,267	0/1:12,2:14:99:113,0,115	0/1:12,2:13:31.89:32,0,330	0/1:24,0:23:22.37:79,0,22	0/0:17,0:16:14.39:0,14,152	0/1:22,4:21:73.83:74,0,371	0/1:14,3:16:99:106,0,196	0/1:8,2:10:40.41:40,0,65	0/1:29,0:27:19.04:112,0,19	0/0:32,0:30:88.67:0,89,1206	0/1:15,0:15:67.45:67,0,148	0/0:11,0:11:33.11:0,33,475
chr10	38023215	.	AAGAGAGAGAGAGAGAG	A	7304.79	PASS	AB=0.850;AC=20;AF=0.357;AN=56;BaseQRankSum=-1.187;DP=668;FS=17.975;HRun=0;HaplotypeScore=254.6374;InbreedingCoeff=0.7157;MQ=44.31;MQ0=43;MQRankSum=-2.964;QD=35.98;ReadPosRankSum=0.203;VQSLOD=2.5123;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:20.86:0,21,463	1/1:2,3:5:8.99:255,9,0	0/0:80,0:23:18.81:0,19,320	0/0:120,0:22:18.95:0,19,539	0/0:12,0:13:3.01:0,3,63	1/1:5,7:11:12.04:408,12,0	1/1:12,19:31:26.70:927,27,0	0/1:30,0:30:99:427,0,110	0/0:11,0:12:9.03:0,9,217	1/1:7,12:18:33.57:1108,34,0	1/1:8,4:12:8.56:216,9,0	0/0:18,0:18:33.11:0,33,832	0/0:12,0:11:27.09:0,27,800	0/0:10,0:11:21.06:0,21,420	0/0:15,0:21:41.41:0,41,657	0/0:16,0:16:13.82:0,14,360	0/0:14,0:17:35.66:0,36,598	0/1:7,6:14:35.66:779,0,36	1/1:12,1:12:0.28:130,0,0	1/1:7,17:23:33.06:1112,33,0	0/0:15,0:16:3.37:0,3,17	0/0:21,0:19:54.18:0,54,1200	0/0:18,0:17:45.01:0,45,781	0/0:11,0:10:13.56:0,14,238	1/1:11,16:26:27.08:901,27,0	0/0:31,0:30:78.26:0,78,4586	1/1:9,7:16:27.01:1042,27,0	0/0:11,0:11:33.11:0,33,1947
chr10	38023216	.	AGAGAG	A	1737.39	PASS	AB=0.948;AC=17;AF=0.304;AN=56;BaseQRankSum=5.510;DP=671;FS=5.629;HRun=0;HaplotypeScore=199.0920;InbreedingCoeff=-0.3184;MQ=43.31;MQ0=43;MQRankSum=-3.726;QD=6.23;ReadPosRankSum=3.179;VQSLOD=2.2176;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:15.16:0,15,218	0/1:5,0:5:18.38:18,0,33	0/0:78,0:23:42:0,42,452	0/0:118,0:21:39.95:0,40,567	0/0:16,0:16:9.01:0,9,103	0/0:11,0:11:5.77:0,6,18	0/1:30,0:30:52.08:54,0,52	0/0:31,0:31:89.34:0,89,918	1/1:13,0:12:5.38:41,5,0	0/1:19,0:18:99:140,0,195	0/0:12,0:12:6.44:0,6,51	0/0:19,0:18:5.12:0,5,493	0/1:12,0:11:99:111,0,257	0/1:9,2:11:55.90:208,0,56	0/1:15,8:21:99:465,0,106	0/1:19,0:18:24.33:24,0,128	0/1:15,2:17:99:217,0,258	0/1:14,0:14:99:147,0,112	0/1:13,0:12:17.23:17,0,295	0/1:24,0:23:48.10:48,0,76	0/0:19,0:16:8.09:0,8,109	0/1:22,3:20:99:255,0,354	0/0:19,0:17:11.88:0,12,215	0/1:9,1:9:53.40:76,0,53	0/1:27,0:25:2.69:3,0,74	0/0:32,0:30:90.30:0,90,2263	0/1:16,0:16:69.08:69,0,146	0/0:11,0:11:33.11:0,33,910
chr10	38023221	.	G	GAGAGAGAGAGAGAA	5861.42	PASS	AB=1.000;AC=35;AF=0.625;AN=56;BaseQRankSum=-2.308;DP=686;FS=13.359;HRun=0;HaplotypeScore=257.2529;InbreedingCoeff=0.2108;MQ=44.51;MQ0=53;MQRankSum=-4.142;QD=14.02;ReadPosRankSum=-3.591;VQSLOD=1.8065;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:27:17.92:239,18,0	0/1:5,0:5:5.73:6,0,56	0/0:78,0:21:3.25:0,3,41	0/0:115,0:20:11.63:0,12,202	1/1:5,11:18:5.92:39,6,0	0/1:11,0:9:0.48:23,0,0	0/1:30,0:29:43.51:44,0,82	0/1:30,0:28:31.89:91,0,32	1/1:3,10:13:9.03:181,9,0	0/1:19,0:18:4.74:5,0,250	0/1:13,0:12:2.04:13,0,2	1/1:22,0:20:19.17:642,19,0	1/1:15,0:13:30.56:601,31,0	1/1:11,1:12:23.93:660,24,0	1/1:22,0:20:41.87:1051,42,0	1/1:7,10:17:7.56:221,8,0	1/1:16,1:17:32.29:859,32,0	0/1:14,0:14:6.55:7,0,411	0/1:13,0:12:24:24,0,61	0/0:27,0:23:8.71:0,9,128	1/1:18,0:15:2.49:14,2,0	1/1:26,0:21:35.90:555,36,0	0/1:20,0:18:4.23:253,0,4	1/1:10,0:9:11.59:309,12,0	0/1:27,0:25:20.41:20,0,86	0/0:35,0:32:80.95:0,81,1559	0/1:17,0:16:5.79:6,0,143	0/0:12,0:12:32.93:0,33,783
chr10	38023223	.	G	GAGAGAGAGAGAA	4435.96	PASS	AB=0.996;AC=27;AF=0.482;AN=56;BaseQRankSum=0.087;DP=680;FS=10.130;HRun=0;HaplotypeScore=239.1521;InbreedingCoeff=-0.0272;MQ=45.81;MQ0=54;MQRankSum=-3.515;QD=11.06;ReadPosRankSum=-1.030;VQSLOD=2.1243;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:9,17:35:20.89:327,21,0	0/1:5,0:5:3.69:4,0,72	0/0:76,0:17:2.39:0,2,40	0/0:110,0:19:13.46:0,13,217	0/0:18,0:18:8.39:0,8,56	0/1:9,0:8:0.40:18,0,0	0/1:32,0:29:33.45:33,0,103	0/1:27,0:25:55.31:88,0,55	1/1:13,0:12:9.03:167,9,0	0/1:18,0:18:1.78:2,0,278	0/1:11,0:10:1.23:12,0,1	1/1:22,0:20:21.15:728,21,0	0/1:14,0:13:22.13:323,0,22	0/1:13,0:13:11.63:415,0,12	0/1:22,0:20:14.62:672,0,15	0/1:17,0:16:7.34:186,0,7	0/1:16,0:16:4.19:579,0,4	0/1:13,0:13:1.03:1,0,433	0/1:13,0:13:24.85:25,0,67	0/0:26,0:22:10:0,10,149	0/1:17,0:14:2.96:3,0,4	0/1:27,0:22:75:248,0,75	1/1:20,0:18:8.42:303,8,0	1/1:10,0:9:13.11:288,13,0	0/1:27,0:25:12.46:12,0,93	0/0:35,0:32:83.95:0,84,1490	0/1:16,0:15:1.53:2,0,169	0/0:12,0:12:32.97:0,33,719
chr10	38023225	.	G	GAGAGAGAGAA	4126.12	PASS	AB=0.995;AC=25;AF=0.446;AN=56;BaseQRankSum=0.781;DP=673;FS=12.287;HRun=0;HaplotypeScore=222.7875;InbreedingCoeff=-0.0009;MQ=46.33;MQ0=53;MQRankSum=-3.247;QD=11.72;ReadPosRankSum=-0.080;VQSLOD=1.4756;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:34,0:34:3.72:199,4,0	0/1:4,0:4:3.74:4,0,64	0/0:72,0:15:3.34:0,3,41	0/0:108,0:20:17.05:0,17,244	0/0:19,0:19:8.19:0,8,52	1/1:10,0:8:1.14:19,1,0	0/1:31,0:28:35.01:35,0,138	0/1:27,0:23:53.95:89,0,54	1/1:14,0:13:9.02:92,9,0	0/0:19,0:18:1.03:0,1,281	0/1:11,0:10:0.43:12,0,0	1/1:10,11:22:23.64:945,24,0	0/1:14,0:13:38.61:259,0,39	0/1:14,0:14:70.87:312,0,71	0/1:22,0:20:16.04:444,0,16	0/1:17,0:16:49.39:129,0,49	0/1:17,0:17:29.28:468,0,29	0/0:13,0:13:15.83:0,16,430	0/1:14,0:13:24.67:25,0,64	0/0:25,0:21:8.51:0,9,150	0/0:17,0:14:5.84:0,6,47	0/1:27,0:22:79.99:166,0,80	1/1:17,3:18:40.52:562,41,0	1/1:7,3:9:15.44:351,15,0	0/1:27,0:24:13.19:13,0,80	0/0:36,0:33:89.94:0,90,1424	0/1:14,0:13:1.48:1,0,161	0/0:12,0:12:32.97:0,33,654
chr10	38023230	.	AG	A	1275.14	PASS	AB=0.826;AC=21;AF=0.375;AN=56;BaseQRankSum=5.912;DP=609;FS=9.338;HRun=1;HaplotypeScore=146.1478;InbreedingCoeff=0.7607;MQ=43.60;MQ0=52;MQRankSum=-5.945;QD=8.50;ReadPosRankSum=3.293;VQSLOD=0.6478;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:21.06:0,21,278	1/1:3,0:3:8.47:57,8,0	0/0:64,0:14:21.44:0,21,235	0/0:100,0:19:37.51:0,38,395	0/0:21,0:21:15:0,15,173	1/1:9,1:8:11.69:97,12,0	1/1:21,2:20:27.16:163,27,0	0/1:10,6:12:93.74:161,0,94	0/0:13,0:12:12.04:0,12,172	1/1:13,0:13:26.94:190,27,0	1/1:5,3:7:11.62:80,12,0	0/0:26,0:24:35.99:0,36,361	0/0:17,0:16:42.06:0,42,487	0/0:16,0:16:36.94:0,37,420	0/0:26,0:24:56.99:0,57,610	0/0:14,0:13:21.05:0,21,251	0/0:18,0:18:21.52:0,22,531	0/1:9,0:9:52.67:53,0,62	1/1:4,2:5:6.21:85,6,0	1/1:19,4:18:29.79:166,30,0	0/1:5,3:7:0.69:108,0,1	0/0:28,0:23:63.13:0,63,761	0/0:22,0:20:54.01:0,54,653	0/0:11,0:10:14.63:0,15,164	1/1:19,0:16:25.23:169,25,0	0/0:35,0:33:96.93:0,97,1353	1/1:9,2:10:24.76:153,25,0	0/0:13,0:13:39.13:0,39,565
chr10	38023231	.	G	GA	1768.11	PASS	AB=0.923;AC=20;AF=0.357;AN=56;BaseQRankSum=4.440;DP=615;FS=5.767;HRun=1;HaplotypeScore=144.9466;InbreedingCoeff=0.6598;MQ=43.95;MQ0=51;MQRankSum=-2.895;QD=11.12;ReadPosRankSum=1.698;VQSLOD=2.0620;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:20.83:0,21,210	1/1:4,0:4:2.53:49,3,0	0/0:61,0:14:19.40:0,19,200	0/0:98,0:19:37.37:0,37,384	0/0:20,0:20:15.05:0,15,185	1/1:9,1:8:12.03:136,12,0	1/1:22,1:20:25.08:221,25,0	0/1:11,5:12:82.02:294,0,82	0/0:13,0:12:12.04:0,12,144	0/1:14,0:14:0.87:118,0,1	1/1:8,0:7:11.95:109,12,0	0/0:24,0:22:9.40:0,9,167	0/0:19,0:17:33.70:0,34,404	0/0:16,0:16:33.08:0,33,356	0/0:26,0:24:56.27:0,56,609	0/0:14,0:13:14.36:0,14,189	0/0:18,0:18:18.49:0,18,452	0/1:11,0:11:10.15:10,0,85	1/1:7,0:6:2.83:110,3,0	1/1:22,1:18:19.98:279,20,0	0/1:12,1:10:3.23:172,0,3	0/0:29,0:24:63.01:0,63,694	0/0:22,0:20:48.56:0,49,508	0/0:12,0:11:9.31:0,9,99	1/1:18,1:16:20.52:264,21,0	0/0:36,0:34:96.09:0,96,1185	1/1:9,2:10:13.55:199,14,0	0/0:13,0:13:39.11:0,39,487
chr10	38026278	.	A	ATGTGTG	4433.09	PASS	AB=1.000;AC=42;AF=0.808;AN=52;BaseQRankSum=-3.979;DP=637;FS=1.904;HRun=0;HaplotypeScore=159.7000;InbreedingCoeff=0.3367;MQ=64.87;MQ0=7;MQRankSum=0.077;QD=8.92;ReadPosRankSum=-2.683;VQSLOD=3.7108;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:40,0:38:22.39:424,22,0	1/1:15,0:14:15.39:197,15,0	./.	./.	1/1:32,0:29:6.02:111,6,0	1/1:25,0:26:24:391,24,0	1/1:17,0:22:2.77:70,3,0	1/1:24,0:23:17.96:162,18,0	1/1:10,9:19:3.01:96,3,0	1/1:22,0:22:33.32:518,33,0	1/1:13,0:13:6.02:138,6,0	0/0:16,0:19:1.35:0,1,2	1/1:12,0:20:6.02:155,6,0	1/1:24,0:24:12.04:362,12,0	1/1:21,0:21:12.04:284,12,0	1/1:22,0:21:18.06:461,18,0	1/1:17,0:28:5.10:155,5,0	1/1:14,0:18:5.52:77,6,0	1/1:23,0:22:15.01:273,15,0	1/1:15,0:15:2.69:69,3,0	1/1:28,0:28:6.02:140,6,0	0/1:22,0:22:0:1,0,0	0/0:21,0:25:0.46:0,0,1	0/0:20,0:34:4.01:0,4,8	1/1:12,7:21:2.81:94,3,0	0/1:13,0:24:29.84:30,0,111	1/1:18,0:18:12.01:227,12,0	0/0:13,0:14:3.01:0,3,42
chr10	38026471	.	AGG	A	12690.93	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-1.767;DP=521;FS=34.360;HRun=9;HaplotypeScore=105.2366;InbreedingCoeff=0.9252;MQ=80.83;MQ0=0;MQRankSum=-5.818;QD=28.58;ReadPosRankSum=5.261;VQSLOD=2.8069;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,38:39:99:1150,99,0	1/1:0,5:5:15.04:175,15,0	0/0:24,0:25:43.47:0,43,789	0/0:17,0:18:29.50:0,29,368	1/1:2,25:27:57.62:665,58,0	1/1:4,18:22:54.15:629,54,0	1/1:2,16:18:39.11:454,39,0	1/1:4,23:27:57.14:664,57,0	1/1:1,12:13:36.11:419,36,0	1/1:3,17:20:51.14:593,51,0	1/1:3,16:19:45.13:524,45,0	1/1:1,15:16:42.12:489,42,0	1/1:3,15:18:36.10:419,36,0	1/1:3,11:14:33.09:385,33,0	1/1:2,14:16:39.11:454,39,0	1/1:2,14:16:39.11:454,39,0	1/1:2,19:21:57.17:664,57,0	1/1:1,18:19:54.15:629,54,0	1/1:0,19:19:51.12:574,51,0	1/1:2,23:25:66.19:769,66,0	1/1:0,17:17:39.10:454,39,0	1/1:1,7:8:18.04:206,18,0	1/1:0,16:16:42.12:487,42,0	1/1:1,20:21:45.13:524,45,0	1/1:0,18:18:54.16:629,54,0	0/0:9,1:18:1.09:0,1,293	1/1:2,8:10:24.07:279,24,0	0/0:6,0:15:27.05:0,27,306
chr10	38026559	.	A	ACAATCCCCCAC	51983.15	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-1.760;DP=581;FS=12.092;HRun=0;HaplotypeScore=199.0603;InbreedingCoeff=0.9887;MQ=73.72;MQ0=0;MQRankSum=-12.183;QD=104.17;ReadPosRankSum=-1.532;VQSLOD=3.4849;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:34:84.17:2512,84,0	1/1:2,6:8:21.07:1076,21,0	0/0:18,0:18:48.07:0,48,1288	0/0:20,0:20:54.14:0,54,1597	1/1:22,0:28:35.69:1305,36,0	1/1:14,7:21:60.17:2633,60,0	1/1:7,10:21:48.16:2391,48,0	1/1:31,9:45:99:5616,120,0	1/1:13,0:18:48.16:1983,48,0	1/1:13,17:32:87.30:4387,87,0	1/1:12,5:17:42.09:2001,42,0	1/1:9,0:12:30.10:1171,30,0	1/1:12,0:17:45.09:1543,45,0	1/1:14,0:21:57.20:2324,57,0	1/1:15,0:28:84.29:3553,84,0	1/1:18,0:24:63.16:2293,63,0	1/1:9,0:13:30.10:1303,30,0	1/1:8,4:12:33.06:1547,33,0	1/1:16,5:21:56.50:1921,56,0	1/1:13,10:24:63.20:2783,63,0	1/1:9,2:11:13.23:649,13,0	1/1:15,0:19:45.10:1498,45,0	1/1:15,0:17:20.97:663,21,0	1/1:7,0:11:18.53:781,19,0	1/1:15,10:25:69.24:3089,69,0	0/0:26,0:26:78.22:0,78,2660	1/1:8,10:20:57.20:2962,57,0	0/0:18,0:18:45.15:0,45,1544
chr10	38026806	.	C	CA	24606.77	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-10.371;DP=683;FS=7.279;HRun=0;HaplotypeScore=68.1421;InbreedingCoeff=0.9838;MQ=90.38;MQ0=0;MQRankSum=-7.620;QD=41.43;ReadPosRankSum=6.255;VQSLOD=4.9545;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,49:50:99:2202,138,0	1/1:0,4:4:9.03:144,9,0	0/0:27,0:27:68.85:0,69,844	0/0:29,0:29:73.13:0,73,982	1/1:2,31:33:78.25:1221,78,0	1/1:0,21:21:51.17:815,51,0	1/1:1,19:20:42.14:663,42,0	1/1:1,16:17:48.16:768,48,0	1/1:0,22:22:60.20:958,60,0	1/1:0,24:24:69.14:1000,69,0	1/1:0,19:19:45.15:718,45,0	1/1:0,31:31:87.30:1390,87,0	1/1:1,26:27:66.70:1053,67,0	1/1:0,25:25:72.25:1150,72,0	1/1:0,26:26:63.21:1007,63,0	1/1:0,29:29:72.25:1150,72,0	1/1:0,20:20:51.17:815,51,0	1/1:0,20:20:57.19:908,57,0	1/1:0,19:19:56.72:815,57,0	1/1:0,25:25:63.21:1006,63,0	1/1:0,38:38:99:1582,99,0	1/1:1,18:19:51.17:813,51,0	1/1:0,18:18:42.14:671,42,0	1/1:0,30:30:87.30:1390,87,0	1/1:1,27:28:69.24:1102,69,0	0/0:23,0:23:66.18:0,66,898	1/1:1,28:29:81.23:1266,81,0	0/0:10,0:10:30.10:0,30,419
chr10	38027841	.	TGTTGG	T	10837.75	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=19.914;DP=744;FS=2.996;HRun=0;HaplotypeScore=204.2098;InbreedingCoeff=0.9258;MQ=77.17;MQ0=0;MQRankSum=-17.756;QD=42.84;ReadPosRankSum=0.231;VQSLOD=4.8779;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,135,4302	1/1:17,0:17:44.94:786,45,0	0/0:29,0:29:78.26:0,78,2390	0/0:27,0:27:75.26:0,75,2308	0/0:31,0:31:93.32:0,93,2919	1/1:18,0:18:39.13:705,39,0	1/1:24,0:24:63.20:1088,63,0	1/1:31,1:32:84.29:1688,84,0	0/0:29,0:29:87.30:0,87,2687	1/1:27,0:27:63.18:1215,63,0	1/1:16,0:16:33.11:552,33,0	0/0:33,0:33:99:0,99,2978	0/0:32,0:32:96.33:0,96,3087	0/0:41,0:41:99:0,120,3607	0/0:40,0:40:99:0,120,3808	0/0:38,0:38:99:0,114,3668	0/0:25,0:25:72.25:0,72,2295	0/1:7,0:7:78.86:248,0,79	1/1:13,5:18:42.09:753,42,0	1/1:25,4:29:69.14:1166,69,0	1/1:18,0:17:32.74:542,33,0	0/0:30,0:30:87.30:0,87,2753	0/0:25,0:25:71.61:0,72,2310	0/0:26,0:26:78.27:0,78,2476	1/1:22,0:22:62.70:1089,63,0	0/0:32,0:32:93.32:0,93,2819	1/1:25,0:25:57.08:1008,57,0	0/0:8,0:8:24.08:0,24,775
chr10	38027842	.	G	GGA	10878.29	PASS	AB=0.545;AC=23;AF=0.411;AN=56;BaseQRankSum=19.164;DP=706;FS=3.476;HRun=0;HaplotypeScore=158.6178;InbreedingCoeff=0.9259;MQ=77.81;MQ0=0;MQRankSum=-18.100;QD=51.31;ReadPosRankSum=-0.003;VQSLOD=4.6727;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,132,2143	1/1:1,14:15:45.15:830,45,0	0/0:27,0:27:63.25:0,63,1163	0/0:27,0:27:75.25:0,75,1205	0/0:32,0:32:93.30:0,93,1491	1/1:0,13:13:39.13:709,39,0	1/1:2,19:21:63.20:1093,63,0	1/1:1,27:28:84.29:1582,84,0	0/0:30,0:30:84.29:0,84,1366	1/1:1,20:21:63.22:1184,63,0	1/1:3,11:14:35.91:602,36,0	0/0:33,0:33:93.28:0,93,1464	0/0:33,0:33:96.33:0,96,1566	0/0:41,0:41:99:0,114,1831	0/0:40,0:40:99:0,120,1957	0/0:39,0:39:99:0,114,1857	0/0:25,0:25:75.23:0,75,1180	0/1:1,5:6:30.89:262,0,31	1/1:5,10:15:39.13:725,39,0	1/1:4,21:25:66.18:1151,66,0	1/1:2,12:13:33.02:581,33,0	0/0:29,0:29:84.27:0,84,1345	0/0:27,0:27:72.25:0,72,1174	0/0:26,0:26:78.25:0,78,1247	1/1:2,19:21:63.22:1146,63,0	0/0:32,0:32:93.28:0,93,1443	1/1:0,19:19:57.19:1013,57,0	0/0:8,0:8:24.08:0,24,392
chr10	38027844	.	TGGGG	T	6736.76	PASS	AB=0.545;AC=23;AF=0.411;AN=56;BaseQRankSum=20.089;DP=708;FS=3.085;HRun=4;HaplotypeScore=199.2988;InbreedingCoeff=0.9255;MQ=78.86;MQ0=0;MQRankSum=-18.686;QD=32.54;ReadPosRankSum=1.809;VQSLOD=1.4882;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,135,3899	1/1:1,14:15:42.13:503,42,0	0/0:30,0:30:84.20:0,84,2243	0/0:26,0:26:72.22:0,72,1992	0/0:31,0:31:93.32:0,93,2639	1/1:0,13:13:39.12:458,39,0	1/1:0,19:19:57.17:654,57,0	1/1:1,27:28:81.26:1078,81,0	0/0:30,0:30:90.30:0,90,2480	1/1:1,20:21:60.19:784,60,0	1/1:2,11:13:31.33:335,31,0	0/0:35,0:35:99:0,105,2858	0/0:34,0:34:99:0,102,2916	0/0:41,0:41:99:0,123,3375	0/0:41,0:41:99:0,123,3443	0/0:39,0:39:99:0,117,3332	0/0:25,0:25:72.25:0,72,2047	0/1:1,5:6:71.90:137,0,72	1/1:5,10:15:33.11:438,33,0	1/1:4,21:25:66.17:753,66,0	1/1:1,12:12:24.07:273,24,0	0/0:30,0:30:90.31:0,90,2595	0/0:27,0:27:78.03:0,78,2212	0/0:27,0:27:81.28:0,81,2280	1/1:1,19:20:57.17:670,57,0	0/0:32,0:32:93.30:0,93,2528	1/1:0,19:19:57.13:653,57,0	0/0:8,0:8:24.08:0,24,696
chr10	38027849	.	A	AC	8351.66	PASS	AB=0.571;AC=23;AF=0.411;AN=56;BaseQRankSum=20.318;DP=747;FS=2.397;HRun=0;HaplotypeScore=179.1041;InbreedingCoeff=0.9264;MQ=74.26;MQ0=0;MQRankSum=-18.619;QD=32.75;ReadPosRankSum=-2.673;VQSLOD=3.6318;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,144,2010	1/1:8,14:22:66.11:752,66,0	0/0:27,0:27:75.15:0,75,984	0/0:25,0:25:69.21:0,69,935	0/0:32,0:32:93.29:0,93,1268	1/1:3,13:16:48.15:588,48,0	1/1:3,19:22:63.20:767,63,0	1/1:6,27:33:90.28:1111,90,0	0/0:29,0:29:84.28:0,84,1175	1/1:6,23:29:84.16:1028,84,0	1/1:2,11:14:39.08:444,39,0	0/0:31,0:31:93.28:0,93,1264	0/0:34,0:34:99:0,102,1425	0/0:42,0:42:99:0,123,1670	0/0:42,0:42:99:0,120,1676	0/0:37,0:37:99:0,105,1468	0/0:23,0:23:66.19:0,66,903	0/1:2,5:8:20.98:184,0,21	1/1:11,10:21:54.08:629,54,0	1/1:6,21:27:75.23:901,75,0	1/1:3,12:15:30.09:366,30,0	0/0:31,0:31:93.31:0,93,1300	0/0:27,0:27:72.24:0,72,1007	0/0:26,0:26:75.24:0,75,1031	1/1:7,19:26:72.21:858,72,0	0/0:29,0:29:84.26:0,84,1144	1/1:2,19:21:60.13:724,60,0	0/0:8,0:8:24.08:0,24,336
chr10	38027984	.	TC	T	22448.27	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=11.809;DP=659;FS=0.422;HRun=1;HaplotypeScore=162.5222;InbreedingCoeff=0.9996;MQ=83.69;MQ0=0;MQRankSum=-8.702;QD=39.80;ReadPosRankSum=2.977;VQSLOD=4.3896;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,28:28:84.24:1147,84,0	1/1:0,11:11:33.11:460,33,0	0/0:21,0:20:57.19:0,57,887	0/0:28,0:28:63.39:0,63,1028	1/1:2,34:36:84.04:1097,84,0	1/1:0,18:18:54.18:754,54,0	1/1:2,20:22:66.21:904,66,0	1/1:0,33:33:99:1311,99,0	1/1:0,31:31:93.31:1299,93,0	1/1:1,31:32:96.32:1328,96,0	1/1:1,14:15:45.14:611,45,0	1/1:1,28:29:87.28:1197,87,0	1/1:1,27:28:84.28:1169,84,0	1/1:2,23:25:66.22:922,66,0	1/1:3,29:32:96.27:1301,96,0	1/1:0,21:21:63.21:879,63,0	1/1:2,20:22:63.18:859,63,0	1/1:0,9:9:27.09:377,27,0	1/1:1,11:12:36.11:487,36,0	1/1:0,20:20:60.20:837,60,0	1/1:0,42:42:99:1608,117,0	1/1:0,20:20:60.20:837,60,0	1/1:1,13:14:42.03:557,42,0	1/1:1,17:18:45.08:604,45,0	1/1:1,27:28:84.24:1150,84,0	0/0:33,0:33:99:0,99,1555	1/1:1,17:18:54.18:751,54,0	0/0:13,0:13:39.13:0,39,622
chr10	38028039	.	A	AC	22140.74	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-1.441;DP=600;FS=2.368;HRun=0;HaplotypeScore=110.0306;InbreedingCoeff=0.9992;MQ=69.01;MQ0=0;MQRankSum=-6.508;QD=41.31;ReadPosRankSum=2.752;VQSLOD=4.8547;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,26:28:66.01:1029,66,0	1/1:0,13:13:36.12:574,36,0	0/0:15,0:15:38.96:0,39,532	0/0:16,0:16:39.83:0,40,527	1/1:2,33:35:69.23:1101,69,0	1/1:2,14:16:36.12:574,36,0	1/1:0,18:18:48.16:767,48,0	1/1:2,29:31:90.31:1434,90,0	1/1:0,25:25:66.23:1054,66,0	1/1:0,25:25:75.26:1197,75,0	1/1:2,20:22:54.18:859,54,0	1/1:3,23:27:69.22:1054,69,0	1/1:0,22:22:63.21:1002,63,0	1/1:0,22:22:60.20:957,60,0	1/1:2,32:34:90.29:1410,90,0	1/1:0,26:26:66.23:1054,66,0	1/1:0,22:22:60.20:957,60,0	1/1:0,9:9:27.09:431,27,0	1/1:1,21:22:57.19:911,57,0	1/1:2,23:25:66.22:1049,66,0	1/1:2,20:22:51.13:787,51,0	1/1:1,18:19:48.16:765,48,0	1/1:1,14:15:39.13:618,39,0	1/1:0,13:13:29.97:478,30,0	1/1:0,20:20:57.19:909,57,0	0/0:24,0:24:72.24:0,72,1007	1/1:1,24:25:75.21:1168,75,0	0/0:9,0:9:27.09:0,27,378
chr10	38028292	.	GTT	G	1139.81	PASS	AB=0.601;AC=13;AF=0.232;AN=56;BaseQRankSum=-1.444;DP=510;FS=28.372;HRun=16;HaplotypeScore=72.3096;InbreedingCoeff=0.5639;MQ=73.81;MQ0=2;MQRankSum=0.788;QD=7.60;ReadPosRankSum=4.943;VQSLOD=-0.2811;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:24.04:0,24,294	0/0:1,0:9:18.02:0,18,174	0/0:28,0:17:8.05:0,8,208	0/0:22,0:14:0.66:0,1,116	1/1:6,22:31:40.55:391,41,0	0/0:10,0:27:33.02:0,33,330	0/0:2,0:6:12.02:0,12,121	0/0:21,0:38:70.87:0,71,685	1/1:3,9:13:5.76:50,6,0	0/0:8,0:22:54.07:0,54,555	0/0:4,0:15:33.06:0,33,359	0/0:9,0:12:21.03:0,21,235	1/1:5,9:15:17.47:137,17,0	0/1:6,9:16:12.47:63,0,12	0/1:6,11:18:22.82:168,0,23	1/1:4,12:16:23.76:200,24,0	0/1:9,20:30:50.99:231,0,51	0/0:8,0:17:11.39:0,11,143	0/0:18,0:17:39.07:0,39,426	0/0:6,0:29:72.02:0,72,675	0/0:1,0:5:3:0,3,28	1/1:2,9:11:6.68:71,7,0	0/0:14,0:14:39.07:0,39,454	0/0:15,0:15:18.77:0,19,421	0/0:4,0:17:15.03:0,15,162	0/0:21,0:25:26.07:0,26,455	0/0:6,0:19:12.03:0,12,129	0/0:6,0:9:22.78:0,23,225
chr10	38028813	.	T	TA	3102.47	PASS	AB=0.803;AC=18;AF=0.321;AN=56;BaseQRankSum=-2.634;DP=626;FS=0.000;HRun=12;HaplotypeScore=120.9208;InbreedingCoeff=0.6245;MQ=71.42;MQ0=2;MQRankSum=0.299;QD=11.93;ReadPosRankSum=3.338;VQSLOD=2.9889;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,2:19:30.29:176,30,0	0/0:8,0:8:14.87:0,15,107	0/1:24,1:21:31.08:31,0,88	0/0:14,0:10:8.02:0,8,56	0/1:22,12:34:80.58:382,0,81	0/0:32,0:32:75.88:0,76,531	0/0:18,1:20:17.59:0,18,283	0/0:32,0:32:65.04:0,65,463	1/1:2,14:17:35.89:335,36,0	0/0:33,0:34:62.25:0,62,554	0/0:20,1:22:31.90:0,32,377	0/0:10,0:10:23.76:0,24,168	0/1:6,11:17:19.98:151,0,20	1/1:1,17:18:42.06:406,42,0	1/1:7,25:32:29.72:574,30,0	1/1:3,18:22:50.92:481,51,0	1/1:5,15:22:31.75:350,32,0	0/0:8,0:8:14.91:0,15,109	0/0:27,1:29:35.46:0,35,413	0/0:25,0:29:50.76:0,51,346	0/0:9,0:9:20.88:0,21,153	1/1:6,18:24:7.26:392,7,0	0/1:24,3:27:22.38:22,0,335	0/0:14,0:15:4.64:0,5,173	0/0:22,0:23:41.02:0,41,322	0/0:25,1:26:53.36:0,53,394	0/0:28,2:30:38.28:0,38,420	0/0:23,0:25:65.53:0,66,454
chr10	38029073	.	CATAT	C	252.55	PASS	AB=0.936;AC=6;AF=0.107;AN=56;BaseQRankSum=0.824;DP=521;FS=15.925;HRun=0;HaplotypeScore=124.2802;InbreedingCoeff=-0.1169;MQ=63.54;MQ0=7;MQRankSum=2.563;QD=2.55;ReadPosRankSum=-5.243;VQSLOD=-0.6437;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:32:66.12:0,66,1670	0/1:4,0:4:6.20:6,0,61	0/0:20,0:14:26.99:0,27,848	0/0:32,0:10:28.91:0,29,643	0/0:26,0:26:66.22:0,66,1503	0/1:12,0:12:82.21:82,0,209	0/1:22,0:22:9.73:10,0,367	0/0:29,0:29:84.29:0,84,2172	0/0:17,0:16:39.13:0,39,708	0/1:30,0:29:79.12:79,0,1955	0/0:12,0:12:21.06:0,21,440	0/0:13,0:13:33.11:0,33,920	0/0:19,0:19:39.13:0,39,875	0/0:10,0:10:24.04:0,24,474	0/0:25,0:25:66.20:0,66,1323	0/0:29,0:29:72.24:0,72,1495	0/0:19,0:19:36.59:0,37,868	0/0:6,0:5:12.04:0,12,334	0/1:6,5:11:99:161,0,356	0/0:14,0:14:30.10:0,30,720	0/1:19,0:17:33.41:33,0,229	0/0:15,0:15:39.13:0,39,963	0/0:16,0:15:39.13:0,39,991	0/0:22,0:22:39.12:0,39,996	0/0:16,0:16:12.04:0,12,262	0/0:20,0:20:60.21:0,60,1617	0/0:13,0:13:18.03:0,18,319	0/0:16,0:16:44.27:0,44,1057
chr10	38029077	.	TTCTCTCTC	T	3142.66	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-0.016;DP=630;FS=9.146;HRun=0;HaplotypeScore=166.2580;InbreedingCoeff=0.7760;MQ=59.37;MQ0=10;MQRankSum=-6.330;QD=20.02;ReadPosRankSum=5.417;VQSLOD=2.0873;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:40:33.11:0,33,1179	0/0:2,0:7:8.77:0,9,233	0/0:20,0:13:0:0,0,0	0/0:37,0:11:10.58:0,11,214	1/1:16,8:26:24.08:531,24,0	0/0:14,0:14:12.04:0,12,412	0/0:30,0:30:6.02:0,6,209	0/0:32,0:32:23.86:0,24,612	1/1:5,12:17:25.02:586,25,0	0/0:37,0:37:60.66:0,61,1896	0/0:5,0:21:15.64:0,16,236	0/0:23,0:23:6:0,6,52	1/1:8,12:20:9.03:227,9,0	1/1:5,5:10:12:246,12,0	1/1:7,15:24:27.05:625,27,0	1/1:11,16:28:39.04:851,39,0	1/1:10,8:18:9.02:189,9,0	0/0:7,0:7:12.66:0,13,201	0/0:18,0:18:34.14:0,34,1016	0/0:6,0:24:5.39:0,5,32	0/0:22,0:20:6.02:0,6,197	1/1:10,3:13:3.01:76,3,0	0/0:22,0:20:6.01:0,6,165	0/0:26,0:27:9.03:0,9,315	0/0:3,0:26:6.02:0,6,207	0/0:18,0:20:27.08:0,27,859	0/0:8,0:23:30.10:0,30,985	0/0:15,0:18:9.01:0,9,268
chr10	38029081	.	C	CAT	2716.11	PASS	AB=0.862;AC=12;AF=0.214;AN=56;BaseQRankSum=-2.424;DP=640;FS=2.131;HRun=0;HaplotypeScore=129.5601;InbreedingCoeff=-0.2681;MQ=57.37;MQ0=12;MQRankSum=1.478;QD=10.33;ReadPosRankSum=-1.433;VQSLOD=3.2183;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:40:61.65:0,62,801	0/1:7,0:7:24.37:24,0,51	0/0:24,0:13:17.12:0,17,313	0/0:44,0:11:19.13:0,19,333	0/0:25,0:25:57:0,57,698	0/1:6,8:14:55.21:55,0,111	0/1:10,17:28:22.79:59,0,23	0/1:32,0:32:99:973,0,149	0/0:18,0:17:32.89:0,33,289	0/1:17,19:36:99:871,0,298	0/1:21,0:21:53.90:162,0,54	0/0:24,0:24:27.07:0,27,415	0/0:19,0:19:26.91:0,27,313	0/0:10,0:10:20.98:0,21,249	0/0:23,0:23:47.93:0,48,501	0/0:28,0:28:62.87:0,63,660	0/0:19,0:19:32.81:0,33,434	0/1:8,1:7:36.11:158,0,36	0/1:20,0:20:99:134,0,318	0/1:25,0:25:47.05:203,0,47	0/1:7,11:19:24.94:26,0,25	0/0:11,0:11:21.02:0,21,277	0/0:22,0:20:24.08:0,24,358	0/0:28,0:28:29.18:0,29,363	0/1:26,0:26:15.92:59,0,16	0/0:22,0:22:64.39:0,64,887	0/1:21,1:22:99:145,0,202	0/0:17,0:17:37.17:0,37,513
chr10	38029137	.	CTA	C	1517.19	PASS	AB=0.529;AC=5;AF=0.089;AN=56;BaseQRankSum=6.289;DP=664;FS=20.009;HRun=0;HaplotypeScore=127.6427;InbreedingCoeff=0.7571;MQ=85.48;MQ0=5;MQRankSum=-2.825;QD=28.63;ReadPosRankSum=0.417;VQSLOD=3.6855;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:71.91:0,72,1208	0/0:16,0:16:42.14:0,42,779	0/0:46,0:38:99:0,102,1708	0/0:49,0:36:85.25:0,85,1563	0/0:30,0:30:75.23:0,75,1340	0/0:18,0:18:51.17:0,51,954	0/0:26,0:26:69.24:0,69,1288	0/0:42,0:42:99:0,117,1952	0/0:24,0:24:54.18:0,54,977	0/0:27,0:26:78.24:0,78,1365	0/0:18,0:18:47.67:0,48,884	1/1:0,22:21:57.19:803,57,0	0/0:24,0:24:54.09:0,54,1001	0/0:19,0:19:51.17:0,51,952	0/0:23,0:23:51.17:0,51,952	0/0:33,0:33:96.31:0,96,1754	0/0:22,0:22:63.22:0,63,1148	0/0:6,0:5:15:0,15,243	0/0:22,0:22:63.17:0,63,1098	0/0:26,0:26:69.24:0,69,1270	0/0:23,0:23:54.17:0,54,952	0/0:15,0:15:45.12:0,45,779	1/1:0,13:13:30.07:434,30,0	0/1:2,16:18:20.04:411,0,20	0/0:17,0:17:24.08:0,24,442	0/0:23,0:23:66.21:0,66,1173	0/0:28,0:28:66.18:0,66,1194	0/0:4,0:4:9.03:0,9,169
chr10	38030972	.	TTG	T	2953.49	PASS	AB=0.971;AC=33;AF=0.589;AN=56;BaseQRankSum=7.564;DP=468;FS=97.360;HRun=0;HaplotypeScore=84.2171;InbreedingCoeff=-0.0761;MQ=58.93;MQ0=21;MQRankSum=5.870;QD=9.56;ReadPosRankSum=3.073;VQSLOD=-0.3732;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:13:30.38:226,30,0	1/1:1,5:6:8.94:84,9,0	0/0:66,0:10:16.76:0,17,120	0/0:46,0:17:22.87:0,23,202	0/1:21,0:23:3.67:152,0,4	0/1:13,0:13:6.91:154,0,7	1/1:11,1:11:19.89:161,20,0	0/1:22,2:24:24.38:247,0,24	0/1:10,0:9:13.94:59,0,14	0/1:18,0:17:4.37:247,0,4	0/1:16,2:19:13.51:182,0,14	1/1:9,0:7:5.38:66,5,0	0/1:11,0:11:13.66:97,0,14	0/1:9,1:10:12.33:88,0,12	1/1:11,0:11:3.43:159,3,0	0/1:14,0:14:1.42:145,0,1	0/1:21,0:21:28.88:162,0,29	0/1:9,0:9:6.83:44,0,7	0/1:13,0:12:17.20:82,0,17	1/1:15,2:17:14.49:295,14,0	1/1:4,0:4:7.88:41,8,0	0/1:9,0:9:10.17:77,0,10	0/1:5,0:5:32.87:37,0,33	1/1:2,0:2:2.97:20,3,0	0/1:18,1:19:2.89:79,0,3	0/0:25,0:25:61:0,61,556	1/1:14,2:16:6.35:216,6,0	0/0:22,0:21:15.18:0,15,173
chr10	38030973	.	TG	T	3905.72	PASS	AB=1.000;AC=49;AF=0.875;AN=56;BaseQRankSum=1.676;DP=398;FS=1.595;HRun=3;HaplotypeScore=72.6414;InbreedingCoeff=0.7642;MQ=63.85;MQ0=20;MQRankSum=2.058;QD=14.41;ReadPosRankSum=1.274;VQSLOD=2.7929;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:14:33.96:234,34,0	1/1:5,1:6:8.86:57,9,0	0/0:62,0:9:13.52:0,14,93	0/0:44,0:18:19.31:0,19,171	1/1:16,0:16:32.11:243,32,0	1/1:10,0:10:23.90:186,24,0	1/1:9,1:9:24.18:168,24,0	1/1:4,13:17:38.89:332,39,0	1/1:8,0:7:18.54:113,19,0	1/1:17,0:16:35.38:275,35,0	1/1:16,0:16:29.59:208,30,0	1/1:7,0:5:9.92:75,10,0	1/1:7,0:7:18.83:142,19,0	1/1:9,0:9:20:167,20,0	1/1:9,0:10:26.26:195,26,0	1/1:11,0:11:29.44:228,29,0	1/1:15,1:16:38.13:270,38,0	1/1:5,0:5:8.97:70,9,0	1/1:7,0:6:14.71:108,15,0	1/1:15,0:16:37.73:269,38,0	1/1:3,0:3:8.88:60,9,0	1/1:0,7:7:17.55:101,18,0	1/1:2,0:2:6:52,6,0	1/1:2,0:2:2.97:20,3,0	1/1:4,13:18:14:94,14,0	0/0:20,0:20:46.97:0,47,371	1/1:11,1:14:36.16:239,36,0	0/1:22,0:21:0.73:1,0,102
chr10	38031076	.	CTT	C	4379.57	PASS	AB=0.870;AC=36;AF=0.643;AN=56;BaseQRankSum=-1.495;DP=464;FS=12.697;HRun=15;HaplotypeScore=113.5835;InbreedingCoeff=0.7572;MQ=67.07;MQ0=5;MQRankSum=2.503;QD=11.97;ReadPosRankSum=3.487;VQSLOD=2.4791;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:24.08:0,24,310	1/1:2,7:10:14.71:117,15,0	0/0:23,0:15:10.29:0,10,100	0/0:14,0:7:8.81:0,9,77	1/1:35,0:35:47.01:318,47,0	0/1:11,5:16:0.48:148,0,0	1/1:7,8:16:19.78:215,20,0	1/1:10,17:27:26.09:391,26,0	1/1:14,0:14:18.99:109,19,0	1/1:4,11:15:6.17:214,6,0	1/1:3,12:15:29.87:263,30,0	0/0:7,0:8:5.55:0,6,31	1/1:14,1:15:21.23:121,21,0	0/1:15,0:15:14.11:85,0,14	1/1:19,0:19:20.72:141,21,0	1/1:13,0:13:24.25:169,24,0	1/1:26,0:26:38.11:223,38,0	1/1:6,18:25:50.67:425,51,0	1/1:7,13:20:33.77:351,34,0	1/1:13,11:25:38.52:371,39,0	0/0:0,2:2:0:0,0,0	1/1:11,0:11:20.24:134,20,0	0/0:1,0:9:14.92:0,15,123	0/0:7,0:8:11.87:0,12,93	1/1:8,7:17:32.28:253,32,0	0/0:4,0:16:30.64:0,31,245	1/1:11,16:30:29.24:332,29,0	0/0:3,0:6:3:0,3,28
chr10	38031090	.	TTA	T	3221.02	PASS	AB=0.954;AC=35;AF=0.625;AN=56;BaseQRankSum=6.795;DP=459;FS=42.366;HRun=0;HaplotypeScore=108.4367;InbreedingCoeff=0.0726;MQ=72.70;MQ0=6;MQRankSum=-1.946;QD=7.80;ReadPosRankSum=6.672;VQSLOD=1.3838;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:6.77:0,7,111	1/1:8,0:8:0.37:6,0,0	0/1:30,0:17:7.75:8,0,185	0/0:11,0:5:8.97:0,9,84	1/1:34,1:35:92.15:718,92,0	0/1:17,1:17:29.81:30,0,91	0/1:16,0:16:50.72:64,0,51	0/1:22,1:23:33.97:48,0,34	1/1:12,0:12:21.79:173,22,0	0/1:19,0:19:16.73:17,0,170	0/1:15,0:15:47.11:50,0,47	1/1:9,0:9:23.74:126,24,0	1/1:14,1:15:29.73:229,30,0	1/1:16,0:16:32.34:255,32,0	1/1:16,0:16:35.70:276,36,0	1/1:13,1:14:26.97:252,27,0	1/1:25,0:25:44.81:385,45,0	0/1:23,2:24:17.85:107,0,18	0/1:22,1:23:79.28:79,0,116	0/1:21,2:23:60.75:61,0,125	0/0:3,0:3:2.93:0,3,24	1/1:11,0:11:23.83:196,24,0	1/1:11,0:11:2.08:56,2,0	1/1:10,0:10:6.72:58,7,0	0/1:10,2:12:0.86:123,0,1	0/0:15,0:15:35.44:0,35,324	0/1:25,2:27:78.26:78,0,123	0/0:4,0:4:5.99:0,6,52
chr10	38031091	.	TA	T	4139.79	PASS	AB=0.976;AC=26;AF=0.464;AN=56;BaseQRankSum=4.203;DP=466;FS=63.432;HRun=1;HaplotypeScore=99.4152;InbreedingCoeff=0.5664;MQ=74.30;MQ0=6;MQRankSum=-1.595;QD=15.98;ReadPosRankSum=0.760;VQSLOD=0.3251;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:14,0:14:20.73:23,0,21	0/0:8,0:8:13.39:0,13,56	0/1:30,2:19:28.76:29,0,162	0/0:11,0:5:8.01:0,8,63	1/1:5,30:35:92.84:1036,93,0	0/0:19,0:18:1.90:0,2,153	0/0:16,0:16:3.89:0,4,94	0/0:23,0:23:23.83:0,24,159	1/1:0,12:12:24.03:289,24,0	0/0:19,0:19:37.97:0,38,278	0/0:16,0:16:24.02:0,24,162	1/1:9,0:9:22.86:135,23,0	1/1:2,13:15:30.07:351,30,0	1/1:9,8:17:50.04:463,50,0	1/1:1,15:16:36.11:453,36,0	1/1:1,13:14:27.06:326,27,0	1/1:2,23:25:45.12:548,45,0	0/0:25,0:24:3.43:0,3,142	0/1:24,1:25:9.93:10,0,251	0/0:23,0:23:8.96:0,9,241	0/0:3,0:3:2.90:0,3,24	1/1:0,11:11:23.90:265,24,0	1/1:11,0:11:18.90:100,19,0	1/1:9,0:9:16.71:86,17,0	0/1:14,0:14:25.22:25,0,90	0/0:14,0:14:37.50:0,38,270	0/0:27,0:27:3.85:0,4,205	0/0:3,0:3:5.91:0,6,40
chr10	38031092	.	A	AT	3689.35	PASS	AB=1.000;AC=25;AF=0.446;AN=56;BaseQRankSum=4.583;DP=463;FS=10.449;HRun=15;HaplotypeScore=102.5584;InbreedingCoeff=0.8990;MQ=74.41;MQ0=6;MQRankSum=-1.849;QD=18.17;ReadPosRankSum=1.596;VQSLOD=4.0798;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,12:15:26.68:293,27,0	0/0:8,0:8:15.04:0,15,163	0/0:32,0:19:19.85:0,20,256	0/1:11,0:6:4.50:5,0,48	1/1:31,4:35:88.22:836,88,0	0/0:17,0:16:37.79:0,38,401	0/0:16,0:16:28.73:0,29,370	0/0:22,0:22:45.08:0,45,474	1/1:12,0:12:21.47:211,21,0	0/0:19,0:19:51.10:0,51,543	0/0:16,0:16:42.02:0,42,422	1/1:9,0:9:20.90:218,21,0	1/1:15,0:15:27.04:230,27,0	1/1:16,0:16:27.21:289,27,0	1/1:15,1:16:34.98:319,35,0	1/1:14,0:14:26.94:285,27,0	1/1:24,1:25:39.70:398,40,0	0/0:25,0:24:57.95:0,58,576	0/0:23,0:23:55.86:0,56,553	0/0:24,0:24:67.07:0,67,680	0/0:2,0:2:3.01:0,3,34	1/1:12,0:12:21.05:235,21,0	1/1:9,2:12:17.89:207,18,0	1/1:8,2:10:14.26:164,14,0	0/0:14,0:14:40.39:0,40,342	0/0:14,0:14:30.06:0,30,313	0/0:25,0:25:64.53:0,65,643	0/0:3,0:3:5.96:0,6,53
chr10	38032969	.	AG	A	2759.84	PASS	AB=0.968;AC=36;AF=0.643;AN=56;BaseQRankSum=4.325;DP=536;FS=0.000;HRun=1;HaplotypeScore=131.2806;InbreedingCoeff=0.0588;MQ=65.92;MQ0=2;MQRankSum=-2.212;QD=6.11;ReadPosRankSum=-0.025;VQSLOD=0.1831;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:23,1:24:51.48:69,0,51	0/1:13,2:15:14.50:118,0,15	0/0:27,0:15:27.66:0,28,200	0/0:27,0:15:8.89:0,9,143	1/1:31,1:32:40.16:312,40,0	0/1:20,2:22:33.58:34,0,97	0/0:14,0:14:2.97:0,3,126	0/1:23,0:22:31.08:31,0,147	1/1:14,0:14:23.98:128,24,0	0/1:21,0:21:45:45,0,59	0/1:20,1:21:29.31:29,0,123	1/1:15,1:16:26.97:166,27,0	1/1:24,0:24:53.16:291,53,0	1/1:19,0:19:39.12:206,39,0	1/1:25,1:24:40.95:242,41,0	1/1:16,1:17:41.93:250,42,0	1/1:14,0:14:28.80:160,29,0	0/1:13,0:13:7.07:7,0,42	0/1:22,0:22:33.91:34,0,121	0/1:19,0:19:13.21:13,0,80	0/1:7,0:7:3.59:4,0,27	1/1:18,0:18:43.26:216,43,0	1/1:18,4:22:43.76:296,44,0	1/1:10,1:11:19.55:122,20,0	0/1:21,1:22:34.74:35,0,101	0/1:16,1:16:27.78:28,0,51	0/0:16,0:16:9.11:0,9,73	1/1:13,0:13:10.45:103,10,0
chr10	38032970	.	G	GA	10382.97	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-3.129;DP=532;FS=8.338;HRun=12;HaplotypeScore=109.6123;InbreedingCoeff=0.8133;MQ=65.17;MQ0=2;MQRankSum=-3.230;QD=21.68;ReadPosRankSum=2.825;VQSLOD=4.4325;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,19:24:59.93:639,60,0	1/1:5,10:15:21.27:271,21,0	0/0:26,0:14:2.73:0,3,149	0/0:27,0:16:10.31:0,10,115	1/1:29,2:31:72.25:578,72,0	1/1:10,12:22:51.13:570,51,0	1/1:6,7:13:26.90:280,27,0	1/1:9,14:22:43.94:488,44,0	1/1:11,0:11:22.39:155,22,0	1/1:2,19:21:63.14:702,63,0	1/1:7,15:22:37.08:417,37,0	1/1:15,1:16:29.98:243,30,0	1/1:21,3:24:56.88:514,57,0	1/1:17,2:19:46.84:397,47,0	1/1:21,5:24:56.38:486,56,0	1/1:15,2:17:47.37:392,47,0	1/1:14,1:15:27.66:228,28,0	1/1:3,10:13:23.99:258,24,0	1/1:3,19:22:52.92:568,53,0	1/1:8,11:19:44.56:433,45,0	1/1:3,4:7:12.04:138,12,0	1/1:18,0:18:43.04:350,43,0	1/1:21,1:22:58.32:465,58,0	1/1:9,2:11:23.74:208,24,0	1/1:11,11:22:51.22:521,51,0	1/1:4,13:16:39.11:448,39,0	1/1:2,14:16:7.85:323,8,0	1/1:12,1:13:30.03:309,30,0
chr10	38033016	.	AAT	A	1634.65	PASS	AB=0.965;AC=34;AF=0.607;AN=56;BaseQRankSum=-0.253;DP=316;FS=45.731;HRun=0;HaplotypeScore=85.3891;InbreedingCoeff=0.2151;MQ=57.25;MQ0=13;MQRankSum=-7.174;QD=7.40;ReadPosRankSum=-4.695;VQSLOD=0.3065;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,0:7:17.66:110,18,0	0/1:11,0:11:19.18:19,0,103	0/0:20,0:12:29.25:0,29,332	0/0:20,0:5:5.98:0,6,51	1/1:12,0:10:29.49:186,29,0	0/1:10,0:10:44.51:45,0,79	0/1:8,0:8:2.16:2,0,77	0/1:17,4:20:85.82:166,0,86	1/1:4,0:4:11.84:81,12,0	0/1:15,1:16:53.69:54,0,130	0/1:11,0:11:11.95:12,0,128	1/1:3,0:3:8.89:61,9,0	1/1:3,0:3:8.91:61,9,0	1/1:9,0:9:0.66:119,1,0	1/1:15,0:11:32.60:219,33,0	1/1:8,0:8:23.72:160,24,0	1/1:6,0:6:14.86:102,15,0	0/1:8,1:8:14.24:14,0,40	0/0:17,0:16:12.43:0,12,174	0/1:18,1:19:56.55:57,0,154	0/1:4,0:3:9.98:10,0,30	1/1:6,0:5:14.80:101,15,0	1/1:10,0:10:29.56:195,30,0	1/1:6,0:4:5.91:38,6,0	0/1:16,0:19:8.70:9,0,181	0/0:17,0:17:11.59:0,12,356	0/0:14,0:13:18:0,18,146	0/0:7,0:7:20.88:0,21,156
chr10	38033017	.	AT	A	231.07	PASS	AB=0.840;AC=4;AF=0.095;AN=42;BaseQRankSum=-3.091;DP=339;FS=0.846;HRun=14;HaplotypeScore=97.1097;InbreedingCoeff=0.3723;MQ=52.03;MQ0=14;MQRankSum=-0.258;QD=5.50;ReadPosRankSum=1.144;VQSLOD=2.7804;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	0/0:11,0:11:20.75:0,21,175	0/1:18,0:10:2.19:2,0,55	0/0:20,0:5:2.88:0,3,16	0/0:12,0:10:0:0,0,0	0/0:13,0:12:6.67:0,7,159	0/0:12,0:12:20.79:0,21,157	0/0:24,0:23:1.87:0,2,221	./.	0/0:17,0:17:32.87:0,33,292	0/0:14,0:14:23.97:0,24,209	0/0:2,0:2:0:0,0,0	./.	0/0:9,0:9:3:0,3,28	./.	./.	./.	0/0:15,0:13:9.34:0,9,137	0/0:17,0:16:27.12:0,27,311	0/0:19,0:19:15.91:0,16,229	0/0:4,0:3:5.95:0,6,46	0/0:6,0:5:0:0,0,0	0/0:11,0:10:0:0,0,0	./.	0/0:23,0:22:20.97:0,21,352	0/1:9,8:17:14.72:182,0,15	0/0:18,0:17:22.75:0,23,224	1/1:1,6:7:20.83:144,21,0
chr10	38033234	.	T	TAGTTA	21313.40	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-11.990;DP=583;FS=1.872;HRun=0;HaplotypeScore=102.4465;InbreedingCoeff=0.9954;MQ=84.68;MQ0=0;MQRankSum=-10.003;QD=74.00;ReadPosRankSum=2.952;VQSLOD=6.8122;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,37:44:99:2945,105,0	0/0:4,0:4:12.03:0,12,214	0/0:21,0:21:50.83:0,51,892	0/0:22,0:22:47.08:0,47,964	1/1:3,28:31:78.21:2257,78,0	0/0:14,0:14:42.06:0,42,797	0/0:13,0:13:33.08:0,33,614	0/0:26,0:26:66.21:0,66,1296	1/1:4,21:25:57.19:1706,57,0	0/0:21,0:21:57.19:0,57,1147	0/0:16,0:16:42.14:0,42,880	1/1:3,10:14:33.11:967,33,0	1/1:2,13:15:33.11:1012,33,0	1/1:3,17:20:54.19:1648,54,0	1/1:2,32:34:90.31:2729,90,0	1/1:1,17:18:51.18:1577,51,0	1/1:0,22:22:57.20:1765,57,0	0/0:16,0:16:45.15:0,45,943	0/0:26,0:26:75.25:0,75,1492	0/0:11,0:11:30.09:0,30,574	0/0:25,0:25:66.21:0,66,1331	1/1:0,24:24:66.14:1959,66,0	1/1:2,13:16:30.10:925,30,0	1/1:1,22:25:63.17:1822,63,0	0/0:26,0:26:78.27:0,78,1621	0/0:20,0:20:51.16:0,51,1019	0/0:20,0:20:57.03:0,57,1166	0/0:14,0:14:39.13:0,39,804
chr10	38034081	.	TC	T	8275.82	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=10.184;DP=644;FS=2.531;HRun=5;HaplotypeScore=66.7704;InbreedingCoeff=0.9935;MQ=85.39;MQ0=0;MQRankSum=-1.482;QD=28.84;ReadPosRankSum=-0.812;VQSLOD=4.9578;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,108,1439	1/1:0,4:4:12.03:136,12,0	0/0:20,0:20:57.17:0,57,739	0/0:20,0:20:50.73:0,51,617	0/0:21,0:21:63.21:0,63,861	1/1:3,18:21:54.15:613,54,0	1/1:0,26:26:69.20:783,69,0	1/1:5,33:38:99:1105,99,0	0/0:25,0:25:72.23:0,72,970	1/1:0,23:23:69.11:745,69,0	1/1:1,15:16:48.04:512,48,0	0/0:29,0:29:87.27:0,87,1170	0/0:24,0:24:69.21:0,69,912	0/0:21,0:21:60.20:0,60,820	0/0:23,0:23:66.22:0,66,902	0/0:17,0:17:42.14:0,42,570	0/0:21,0:21:63.17:0,63,825	1/1:2,15:17:45.13:510,45,0	1/1:1,25:26:75.21:851,75,0	1/1:0,26:26:75.18:837,75,0	1/1:4,32:36:84.24:953,84,0	0/0:21,0:21:54.18:0,54,736	0/0:15,0:15:42.14:0,42,574	0/0:23,0:23:69.23:0,69,944	1/1:0,18:18:36.10:408,36,0	0/0:32,0:32:93.28:0,93,1236	1/1:4,32:36:74.24:823,74,0	0/0:5,0:5:15.05:0,15,205
chr10	38034648	.	T	TA	21878.09	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=2.318;DP=610;FS=1.862;HRun=0;HaplotypeScore=82.0688;InbreedingCoeff=0.9959;MQ=87.09;MQ0=0;MQRankSum=-6.230;QD=43.15;ReadPosRankSum=4.343;VQSLOD=5.3131;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,41:43:99:1668,105,0	1/1:0,8:8:15.05:240,15,0	0/0:25,0:25:62.18:0,62,809	0/0:17,0:17:43.47:0,43,517	1/1:0,25:25:69.24:1103,69,0	1/1:0,21:21:60.20:959,60,0	1/1:1,16:17:42.14:672,42,0	1/1:0,21:21:63.20:983,63,0	1/1:1,26:27:69.24:1098,69,0	1/1:0,24:24:69.21:1074,69,0	1/1:0,18:18:48.16:767,48,0	0/0:21,0:21:63.21:0,63,880	1/1:0,22:22:60.20:959,60,0	1/1:1,24:25:66.23:1055,66,0	1/1:0,21:21:51.17:815,51,0	1/1:1,16:17:45.15:720,45,0	1/1:0,22:22:60.20:959,60,0	1/1:0,26:26:75.26:1199,75,0	1/1:1,23:24:72.25:1143,72,0	1/1:0,15:15:36.12:575,36,0	1/1:0,39:39:99:1631,102,0	1/1:0,13:13:39.13:624,39,0	0/0:17,0:17:45.15:0,45,629	0/0:23,0:23:69.21:0,69,947	1/1:0,10:10:30.10:479,30,0	1/1:1,25:26:75.26:1191,75,0	1/1:1,33:34:96.33:1535,96,0	1/1:0,9:9:27.09:431,27,0
chr10	38036097	.	G	GGT	7718.17	PASS	AB=0.779;AC=46;AF=0.821;AN=56;BaseQRankSum=3.624;DP=701;FS=26.797;HRun=0;HaplotypeScore=170.1672;InbreedingCoeff=0.2492;MQ=64.94;MQ0=6;MQRankSum=-0.723;QD=12.21;ReadPosRankSum=2.839;VQSLOD=2.8350;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,0:24:11.99:104,12,0	1/1:1,6:7:21.07:321,21,0	0/0:41,0:25:69.01:0,69,917	0/0:28,0:22:56.41:0,56,732	1/1:12,0:27:6.72:43,7,0	0/1:7,14:22:3.41:443,0,3	1/1:11,12:23:12.19:310,12,0	1/1:28,2:30:0.64:261,1,0	1/1:25,0:26:9.59:117,10,0	1/1:11,17:31:31.96:488,32,0	1/1:6,15:21:33.11:505,33,0	0/1:19,9:28:4.92:416,0,5	1/1:13,0:15:14.41:139,14,0	1/1:20,0:23:14.57:123,15,0	1/1:19,0:29:7.28:97,7,0	1/1:18,0:19:5.42:50,5,0	1/1:2,0:13:11.99:102,12,0	0/1:10,5:15:0.01:261,0,0	1/1:22,2:23:24.13:244,24,0	1/1:10,8:19:16.76:435,17,0	1/1:41,17:58:15.97:845,16,0	1/1:18,0:18:9.52:119,10,0	1/1:18,7:25:31.26:421,31,0	1/1:20,16:35:57.10:830,57,0	1/1:16,18:35:26.61:628,27,0	0/1:22,0:21:15.98:16,0,482	0/1:7,18:28:10.81:366,0,11	0/1:12,0:12:33.05:33,0,301
chr10	38036173	.	A	ATG	1839.51	PASS	AC=10;AF=0.278;AN=36;BaseQRankSum=-6.591;DP=415;FS=15.392;HRun=0;HaplotypeScore=75.9657;InbreedingCoeff=0.8523;MQ=49.92;MQ0=33;MQRankSum=5.149;QD=20.67;ReadPosRankSum=0.578;VQSLOD=2.9992;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:30,0:11:25.44:0,25,225	0/0:24,0:4:6.02:0,6,71	0/0:21,0:21:39.12:0,39,462	1/1:6,0:6:2.99:24,3,0	./.	./.	0/0:18,0:18:45.14:0,45,533	./.	./.	1/1:3,17:20:36.12:570,36,0	0/0:21,0:20:48.10:0,48,534	0/0:26,0:26:60.17:0,60,699	0/0:29,0:29:75.21:0,75,876	0/0:21,2:23:6.64:0,7,545	0/0:14,0:14:21.06:0,21,246	./.	0/0:4,0:2:3.01:0,3,33	./.	1/1:14,0:13:14.99:154,15,0	0/0:25,0:24:45.10:0,45,508	1/1:4,14:17:27.09:428,27,0	1/1:9,22:31:51.17:808,51,0	./.	0/0:32,0:31:90.16:0,90,1000	./.	0/0:12,0:11:30.07:0,30,335
chr10	38036240	.	ATGTGTGTGTGTGTGTGTGTG	A	3854.08	PASS	AB=0.909;AC=27;AF=0.563;AN=48;BaseQRankSum=2.120;DP=391;FS=18.089;HRun=0;HaplotypeScore=181.8914;InbreedingCoeff=0.1738;MQ=39.50;MQ0=50;MQRankSum=0.951;QD=18.80;ReadPosRankSum=3.736;VQSLOD=1.6265;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:10:3.01:0,3,133	1/1:2,0:3:3.01:37,3,0	0/0:22,0:6:3.01:0,3,52	0/0:36,0:8:6.02:0,6,150	0/0:13,0:12:0.47:0,0,1	1/1:10,2:14:14.38:341,14,0	0/1:12,0:8:18.31:18,0,191	1/1:16,0:17:5.59:104,6,0	1/1:9,1:10:6.02:299,6,0	1/1:4,0:9:17.72:462,18,0	0/0:9,0:14:0.39:0,0,1	1/1:10,0:13:8.67:119,9,0	0/1:11,0:14:75.29:457,0,75	./.	0/0:19,1:18:3.01:0,3,53	0/1:14,0:12:58.25:195,0,58	0/0:12,0:12:3.01:0,3,53	1/1:2,0:4:12.04:230,12,0	1/1:8,0:9:6.02:99,6,0	./.	1/1:11,0:10:0.47:1,0,0	./.	0/1:15,0:13:32.99:33,0,124	0/0:12,0:14:0:0,0,0	./.	0/1:18,7:22:99:399,0,260	1/1:3,0:12:11.34:597,11,0	1/1:9,3:13:0.96:463,1,0
chr10	38036273	.	T	TGAGA	486.99	PASS	AB=1.000;AC=20;AF=0.417;AN=48;BaseQRankSum=4.216;DP=365;FS=23.903;HRun=0;HaplotypeScore=148.7090;InbreedingCoeff=0.1470;MQ=32.68;MQ0=42;MQRankSum=-1.427;QD=2.47;ReadPosRankSum=2.409;VQSLOD=1.2378;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:13:3.48:0,3,38	1/1:6,0:5:3.01:37,3,0	0/0:5,0:1:3.01:0,3,35	0/0:8,0:3:6.02:0,6,99	0/1:9,0:8:0:0,0,0	1/1:16,0:14:15.46:157,15,0	0/1:12,0:10:18.31:18,0,43	0/1:17,0:14:70.08:70,0,330	0/1:11,0:9:0.67:18,0,1	0/1:20,0:20:7.08:7,0,369	./.	0/0:15,0:13:11.89:0,12,103	0/1:13,0:11:4.93:55,0,5	./.	1/1:10,0:8:4.56:42,5,0	1/1:14,0:12:12.76:109,13,0	0/1:9,0:9:18.95:65,0,19	0/1:13,0:11:39.98:40,0,145	0/0:10,0:6:14.14:0,14,148	./.	1/1:8,0:6:0.47:1,0,0	./.	0/0:16,0:14:27.03:0,27,359	0/0:25,0:19:12.03:0,12,196	0/1:13,0:11:0:0,0,0	0/1:26,0:24:9.13:9,0,624	0/0:21,0:20:5.32:0,5,131	0/0:9,0:9:12.42:0,12,102
chr10	38036515	.	C	CTTT	6925.55	PASS	AB=0.775;AC=48;AF=0.857;AN=56;BaseQRankSum=4.681;DP=512;FS=8.139;HRun=12;HaplotypeScore=99.2913;InbreedingCoeff=0.6621;MQ=65.21;MQ0=5;MQRankSum=-1.146;QD=15.09;ReadPosRankSum=-0.421;VQSLOD=2.9712;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:7,0:39:58.81:98,0,59	1/1:3,0:12:16.32:119,16,0	0/0:15,0:10:8.75:0,9,87	0/1:17,0:11:2.62:3,0,41	1/1:4,2:22:25.33:403,25,0	1/1:4,0:15:32.90:268,33,0	1/1:5,1:15:31.14:258,31,0	1/1:18,1:37:62.44:498,62,0	1/1:4,0:16:18.04:228,18,0	1/1:3,0:17:40.15:338,40,0	1/1:3,0:15:0.44:202,0,0	1/1:7,8:15:26.07:372,26,0	1/1:8,1:20:17.88:266,18,0	1/1:4,2:13:12.04:183,12,0	1/1:6,3:16:23.90:362,24,0	1/1:1,0:10:18.06:254,18,0	1/1:8,2:30:42.14:607,42,0	1/1:3,0:14:26.90:206,27,0	1/1:3,1:8:14.96:147,15,0	1/1:2,2:19:35.79:331,36,0	1/1:2,0:12:20.95:181,21,0	1/1:3,2:8:9.03:138,9,0	1/1:1,13:13:20.66:349,21,0	1/1:8,10:19:21.07:367,21,0	1/1:3,0:28:49.35:360,49,0	0/0:25,0:26:40.13:0,40,638	1/1:7,2:24:41.87:389,42,0	0/0:11,0:12:20.92:0,21,219
chr10	38038803	.	T	TAGAGCCCCCTGC	58375.42	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-4.174;DP=630;FS=10.434;HRun=0;HaplotypeScore=210.2554;InbreedingCoeff=0.9119;MQ=74.92;MQ0=0;MQRankSum=-8.177;QD=99.11;ReadPosRankSum=4.259;VQSLOD=3.6016;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:26,11:39:78.27:3769,78,0	1/1:7,7:15:26.96:1415,27,0	0/0:24,0:24:46.51:0,47,1380	0/0:17,0:17:24.08:0,24,729	1/1:13,9:23:5.93:358,6,0	1/1:13,9:23:57.20:2789,57,0	1/1:18,9:29:57.20:2961,57,0	1/1:35,0:35:81.27:4000,81,0	1/1:5,11:17:39.13:2298,39,0	1/1:21,10:31:81.28:4064,81,0	1/1:8,8:16:11.97:705,12,0	1/1:9,14:25:60.21:3384,60,0	1/1:15,7:23:45.15:2329,45,0	1/1:10,9:19:30.10:1554,30,0	1/1:5,10:17:33.11:1909,33,0	1/1:9,4:13:24.08:1231,24,0	1/1:19,5:26:47.65:2321,48,0	1/1:10,6:19:39.13:2187,39,0	1/1:17,11:30:60.19:2643,60,0	1/1:6,6:13:24.05:1232,24,0	1/1:16,8:27:12.04:668,12,0	1/1:8,14:22:45.08:2495,45,0	1/1:14,10:26:45.08:2257,45,0	1/1:11,7:20:24.08:1350,24,0	1/1:8,8:16:24.08:1427,24,0	1/1:14,19:33:84.29:4592,84,0	1/1:14,7:23:60.21:3196,60,0	1/1:3,6:9:21.07:1241,21,0
chr10	38039179	.	A	AAGGGGG	883.83	PASS	AC=8;AF=0.174;AN=46;BaseQRankSum=-2.556;DP=166;FS=0.000;HRun=0;HaplotypeScore=39.9767;InbreedingCoeff=0.6545;MQ=93.63;MQ0=0;MQRankSum=-4.943;QD=31.57;ReadPosRankSum=2.241;VQSLOD=2.7046;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:33.11:0,33,717	0/0:2,0:2:3.01:0,3,65	0/0:8,0:7:18.03:0,18,346	0/0:16,0:15:24.01:0,24,363	./.	0/0:6,0:6:18.05:0,18,336	0/0:6,0:6:12.03:0,12,221	0/0:4,0:4:3.01:0,3,65	./.	0/0:6,0:6:15.01:0,15,281	0/0:4,0:4:6.02:0,6,130	0/0:13,0:13:30.08:0,30,572	1/1:3,5:8:12.04:383,12,0	1/1:1,6:7:6.02:191,6,0	1/1:3,3:6:6.02:192,6,0	./.	1/1:7,0:7:14.96:251,15,0	0/0:4,0:4:9.01:0,9,155	0/0:8,0:8:18.04:0,18,314	0/0:1,0:1:3.01:0,3,65	0/0:9,0:9:18.03:0,18,303	./.	0/0:6,0:6:9.03:0,9,196	0/0:9,0:8:11.68:0,12,261	0/0:5,0:5:9.03:0,9,195	0/0:5,0:5:12.04:0,12,261	0/0:3,0:3:3.01:0,3,65	./.
chr10	38039260	.	GGCAGAA	G	865.35	PASS	AB=1.000;AC=23;AF=0.767;AN=30;BaseQRankSum=-0.382;DP=48;FS=13.869;HRun=0;HaplotypeScore=22.9443;InbreedingCoeff=0.3030;MQ=92.67;MQ0=2;MQRankSum=-2.090;QD=28.84;ReadPosRankSum=-0.562;VQSLOD=1.3682;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:4:12.04:0,12,334	./.	0/1:9,0:5:13.13:13,0,105	0/0:9,0:7:11.95:0,12,197	./.	./.	1/1:0,3:3:3.01:70,3,0	1/1:3,0:3:9.03:194,9,0	./.	./.	1/1:1,0:1:3.01:52,3,0	1/1:2,0:2:6.02:119,6,0	./.	1/1:2,1:3:6.02:136,6,0	./.	./.	1/1:0,2:2:3.01:70,3,0	./.	./.	./.	0/0:4,0:4:1.36:0,1,2	1/1:2,0:2:6.02:85,6,0	./.	1/1:0,1:1:3.01:70,3,0	1/1:1,0:1:3.01:46,3,0	1/1:1,0:1:3.01:49,3,0	1/1:1,1:2:3.01:70,3,0	./.
chr10	38040974	.	G	GTC	1388.01	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-4.829;DP=681;FS=0.000;HRun=0;HaplotypeScore=123.8080;InbreedingCoeff=0.9977;MQ=88.91;MQ0=0;MQRankSum=-4.432;QD=33.85;ReadPosRankSum=1.868;VQSLOD=5.8807;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,38:41:81.28:1483,81,0	0/0:19,0:19:51.16:0,51,710	0/0:26,0:26:66.09:0,66,881	0/0:26,0:26:72.17:0,72,969	0/0:28,0:28:78.22:0,78,1062	0/0:17,0:17:51.17:0,51,729	0/0:30,0:30:90.30:0,90,1289	0/0:27,0:27:75.23:0,75,1041	0/0:18,0:18:54.17:0,54,755	0/0:30,0:30:87.28:0,87,1210	0/0:16,0:16:45.13:0,45,609	0/0:35,0:35:99:0,102,1441	0/0:28,0:28:75.25:0,75,1071	0/0:28,0:28:78.20:0,78,1041	0/0:30,0:30:84.28:0,84,1202	0/0:11,0:11:33.10:0,33,455	0/0:28,0:28:81.23:0,81,1117	0/0:25,0:25:72.20:0,72,1007	0/0:24,0:24:63.20:0,63,887	0/0:19,0:19:48.16:0,48,686	0/0:28,0:28:72.21:0,72,995	0/0:26,0:26:72.20:0,72,985	0/0:18,0:18:48.14:0,48,667	0/0:23,0:23:63.21:0,63,902	0/0:20,0:20:57.19:0,57,816	0/0:23,0:23:60.17:0,60,820	0/0:29,0:29:81.06:0,81,1025	0/0:8,0:8:24.08:0,24,344
chr10	38043256	.	C	CCTGTGGGGGA	5710.34	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-5.660;DP=662;FS=1.259;HRun=0;HaplotypeScore=192.6318;InbreedingCoeff=0.9926;MQ=73.67;MQ0=0;MQRankSum=-10.632;QD=81.58;ReadPosRankSum=-0.137;VQSLOD=4.9250;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,114,3303	0/0:10,0:10:21.05:0,21,555	0/0:26,0:26:54.07:0,54,1399	0/0:21,0:21:48.15:0,48,1121	0/0:28,0:28:78.26:0,78,2317	0/0:14,0:14:39.10:0,39,1033	0/0:34,0:34:90.27:0,90,2540	0/0:24,0:24:45.15:0,45,1377	0/0:16,0:16:42.12:0,42,1118	0/0:26,0:26:66.22:0,66,1954	0/0:15,0:15:42.13:0,42,1197	1/1:8,16:25:54.19:2639,54,0	0/0:20,0:20:45.14:0,45,1263	0/0:24,0:24:66.19:0,66,1922	0/0:32,0:32:81.28:0,81,2430	0/0:16,0:16:45.15:0,45,1380	0/0:34,0:34:90.31:0,90,2801	0/0:26,0:26:66.23:0,66,2014	0/0:19,0:19:42.14:0,42,1309	0/0:22,0:22:57.17:0,57,1552	0/0:38,0:38:90.28:0,90,2562	0/0:28,0:28:75.26:0,75,2298	1/1:9,17:27:54.18:2535,54,0	1/1:13,4:18:15.52:537,16,0	0/0:12,0:12:27.07:0,27,706	0/0:24,0:24:63.21:0,63,1877	0/0:27,0:27:78.25:0,78,2360	0/0:11,0:11:27.09:0,27,843
chr10	38044942	.	T	TTTTCTTTC	14809.68	PASS	AB=0.931;AC=25;AF=0.446;AN=56;BaseQRankSum=-9.350;DP=654;FS=6.565;HRun=0;HaplotypeScore=149.3708;InbreedingCoeff=0.9013;MQ=72.58;MQ0=1;MQRankSum=-11.450;QD=45.15;ReadPosRankSum=-3.208;VQSLOD=3.7612;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,111,2609	1/1:5,12:17:27.09:1094,27,0	0/0:27,0:26:23.97:0,24,464	0/0:15,0:15:23.97:0,24,430	0/0:26,0:26:60.18:0,60,1382	1/1:12,17:29:48.16:1766,48,0	1/1:10,10:22:20.86:832,21,0	1/1:16,20:40:87.61:1601,88,0	0/0:16,0:16:42.13:0,42,986	1/1:7,16:23:51.03:1450,51,0	1/1:9,14:24:30.02:1017,30,0	0/0:17,0:17:33.10:0,33,762	0/0:13,0:13:33.11:0,33,825	0/0:13,0:13:27.09:0,27,652	0/0:22,0:22:60.18:0,60,1374	0/0:20,0:20:45.15:0,45,1141	0/0:30,0:30:69.20:0,69,1667	1/1:16,10:26:27.46:820,27,0	1/1:10,14:24:54.04:1564,54,0	1/1:8,15:23:33.93:1251,34,0	1/1:11,7:18:3.01:124,3,0	0/0:26,0:26:66.14:0,66,1642	0/0:26,0:26:60.20:0,60,1398	0/0:20,0:20:54.18:0,54,1333	1/1:11,13:24:37.37:1469,37,0	0/1:25,2:27:85.09:85,0,1264	1/1:12,17:30:42.13:1738,42,0	0/0:9,0:9:24.08:0,24,586
chr10	38046102	.	A	AT	11739.04	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-9.020;DP=726;FS=5.658;HRun=2;HaplotypeScore=164.7595;InbreedingCoeff=0.9994;MQ=92.37;MQ0=0;MQRankSum=-3.086;QD=40.06;ReadPosRankSum=5.718;VQSLOD=3.5681;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,102,1250	0/0:7,0:7:21.07:0,21,260	0/0:26,0:26:66.18:0,66,794	0/0:34,0:34:95.78:0,96,1145	1/1:2,34:36:99:1459,102,0	0/0:27,0:27:72.22:0,72,890	0/0:26,0:26:75.24:0,75,929	0/0:31,0:31:90.25:0,90,1075	1/1:0,22:22:63.21:907,63,0	0/0:21,0:21:54.16:0,54,660	0/0:14,0:14:42.13:0,42,521	1/1:1,29:30:84.28:1210,84,0	1/1:0,30:30:87.29:1253,87,0	1/1:1,34:35:99:1423,99,0	1/1:0,29:29:84.28:1210,84,0	1/1:1,26:27:78.26:1123,78,0	1/1:0,23:23:66.22:951,66,0	0/0:24,0:24:63.17:0,63,754	0/0:22,0:22:63.16:0,63,753	0/0:27,0:27:72.18:0,72,842	0/0:50,0:50:99:0,144,1757	1/1:0,21:21:60.20:864,60,0	1/1:1,19:20:48.16:691,48,0	1/1:3,17:20:45.15:648,45,0	0/0:20,0:20:57.16:0,57,675	0/0:28,0:28:81.25:0,81,1004	0/0:27,0:27:81.25:0,81,1000	0/0:13,0:13:39.12:0,39,483
chr10	38046585	.	ACTT	A	14055.98	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=20.744;DP=722;FS=1.238;HRun=0;HaplotypeScore=130.2476;InbreedingCoeff=1.0000;MQ=83.67;MQ0=0;MQRankSum=-5.988;QD=48.81;ReadPosRankSum=5.928;VQSLOD=6.7711;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,102,2508	0/0:13,0:13:39.13:0,39,961	0/0:27,0:27:77.87:0,78,1728	0/0:23,0:23:33.53:0,34,1131	1/1:0,26:26:75.10:1308,75,0	0/0:31,0:31:93.30:0,93,2216	0/0:18,0:18:54.15:0,54,1250	0/0:37,0:37:99:0,111,2711	1/1:0,23:23:66.23:1225,66,0	0/0:30,0:30:88.54:0,89,2145	0/0:23,0:23:69.18:0,69,1581	1/1:0,23:23:63.22:1173,63,0	1/1:0,28:28:75.26:1397,75,0	1/1:1,18:19:48.16:883,48,0	1/1:0,27:27:69.24:1279,69,0	1/1:0,29:29:78.27:1452,78,0	1/1:0,35:35:87.30:1620,87,0	0/0:23,0:23:69.24:0,69,1694	0/0:29,0:29:87.30:0,87,2091	0/0:23,0:23:66.18:0,66,1568	0/0:22,0:22:66.23:0,66,1595	1/1:0,24:24:69.24:1278,69,0	1/1:0,25:25:63.22:1156,63,0	1/1:0,29:29:69.37:1285,69,0	0/0:22,0:22:66.14:0,66,1440	0/0:32,0:32:96.33:0,96,2363	0/0:31,0:31:93.28:0,93,2203	0/0:14,0:14:42.14:0,42,1004
chr10	38046798	.	AGG	A	2688.62	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=15.565;DP=483;FS=1.811;HRun=3;HaplotypeScore=124.4807;InbreedingCoeff=0.9177;MQ=104.24;MQ0=0;MQRankSum=-13.443;QD=17.12;ReadPosRankSum=-1.100;VQSLOD=0.5919;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,114,2060	1/1:1,5:6:12.01:109,12,0	0/0:37,0:37:42.33:0,42,1788	0/0:29,0:29:78.26:0,78,1410	0/0:11,0:11:33.11:0,33,622	1/1:2,2:4:6.01:59,6,0	1/1:1,21:22:56.96:503,57,0	1/1:6,27:33:74.48:679,74,0	0/0:18,0:18:54.19:0,54,1030	1/1:5,5:10:11.97:104,12,0	1/1:0,2:2:3.01:30,3,0	0/0:28,0:27:81.23:0,81,1513	0/0:27,0:27:78.21:0,78,1409	0/0:26,0:26:72.20:0,72,1350	0/0:20,0:20:54.19:0,54,1041	0/0:18,0:18:54.19:0,54,1036	0/0:30,0:30:90.27:0,90,1699	1/1:2,10:12:30.03:279,30,0	1/1:2,7:9:21.90:195,22,0	1/1:0,3:3:8.98:73,9,0	1/1:12,4:16:15:142,15,0	0/0:13,0:13:39.13:0,39,753	0/0:10,0:10:30.10:0,30,565	0/0:20,0:20:57.20:0,57,1086	1/1:3,8:11:20.69:167,21,0	1/1:4,7:11:23.96:207,24,0	1/1:1,12:14:38.93:334,39,0	1/1:2,2:4:3:30,3,0
chr10	38046802	.	CTG	C	2761.25	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=15.544;DP=436;FS=0.400;HRun=0;HaplotypeScore=114.5497;InbreedingCoeff=0.9264;MQ=106.24;MQ0=0;MQRankSum=-13.905;QD=23.80;ReadPosRankSum=-1.430;VQSLOD=4.0629;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,105,2023	1/1:0,5:5:14.99:140,15,0	0/0:34,0:34:53.13:0,53,1777	0/0:28,0:28:81.28:0,81,1635	0/0:11,0:11:33.10:0,33,632	1/1:0,2:2:5.99:52,6,0	1/1:0,21:21:62.81:556,63,0	1/1:2,23:25:66.23:649,66,0	0/0:18,0:18:54.19:0,54,1094	1/1:0,5:5:11.73:104,12,0	1/1:0,2:2:2.91:23,3,0	0/0:27,0:26:78.27:0,78,1580	0/0:24,0:24:72.23:0,72,1422	0/0:27,0:27:72.25:0,72,1448	0/0:20,0:20:54.19:0,54,1096	0/0:18,0:18:54.19:0,54,1096	0/0:33,0:33:99:0,99,1923	1/1:0,10:10:30.06:308,30,0	1/1:0,7:7:18.93:190,19,0	1/1:0,3:3:9:81,9,0	1/1:0,4:4:11.98:100,12,0	0/0:14,0:14:39.13:0,39,792	0/0:9,0:9:27.09:0,27,549	0/0:19,0:19:54.18:0,54,1052	1/1:0,8:9:23.31:175,23,0	1/1:1,7:8:23.90:210,24,0	1/1:1,12:13:38.90:343,39,0	1/1:0,2:2:5.99:54,6,0
chr10	38046807	.	GT	G	3711.36	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=15.083;DP=438;FS=2.335;HRun=2;HaplotypeScore=106.6035;InbreedingCoeff=0.9292;MQ=105.28;MQ0=0;MQRankSum=-14.578;QD=28.12;ReadPosRankSum=-3.063;VQSLOD=2.6281;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:90.27:0,90,1289	1/1:2,5:7:17.89:193,18,0	0/0:33,0:33:86.07:0,86,1216	0/0:28,0:28:78.26:0,78,1141	0/0:10,0:10:30.08:0,30,410	1/1:0,2:2:6:55,6,0	1/1:2,21:23:68.55:717,69,0	1/1:1,23:24:66.03:768,66,0	0/0:17,0:17:51.17:0,51,764	1/1:0,5:5:14.88:157,15,0	1/1:2,2:4:2.18:25,2,0	0/0:26,0:25:75.24:0,75,1104	0/0:22,0:22:66.22:0,66,976	0/0:24,0:24:66.22:0,66,978	0/0:19,0:19:54.18:0,54,800	0/0:19,0:19:57.19:0,57,854	0/0:32,0:32:96.30:0,96,1416	1/1:0,13:13:33.10:398,33,0	1/1:0,7:7:20.96:236,21,0	1/1:0,3:3:9.02:99,9,0	1/1:4,4:8:15:148,15,0	0/0:14,0:14:39.13:0,39,582	0/0:11,0:11:33.11:0,33,495	0/0:18,0:18:48.16:0,48,719	1/1:1,8:9:23.25:194,23,0	1/1:1,10:11:23.52:246,24,0	1/1:2,12:14:41.92:425,42,0	1/1:0,2:2:5.91:51,6,0
chr10	38047002	.	GTGTGTGAA	G	3391.60	PASS	AB=0.962;AC=32;AF=0.593;AN=54;BaseQRankSum=-2.363;DP=471;FS=13.692;HRun=0;HaplotypeScore=113.3526;InbreedingCoeff=-0.0802;MQ=44.24;MQ0=26;MQRankSum=-0.323;QD=9.09;ReadPosRankSum=-0.774;VQSLOD=1.0546;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:32,0:31:2.42:44,2,0	0/0:6,0:6:5.95:0,6,50	./.	0/0:34,0:7:5.97:0,6,68	0/0:13,0:11:0.47:0,0,1	0/1:20,0:20:1.14:187,0,1	0/1:27,0:25:68.83:91,0,69	0/1:22,0:20:99:230,0,118	1/1:3,16:19:5.99:105,6,0	0/1:18,0:18:10.57:320,0,11	1/1:10,0:9:3.01:33,3,0	1/1:23,0:22:9.02:99,9,0	1/1:2,11:12:6.61:166,7,0	0/1:16,0:15:0:0,0,0	1/1:1,9:10:3.01:55,3,0	1/1:14,0:14:33.11:508,33,0	0/1:3,15:18:25.47:190,0,25	0/1:14,0:13:63:98,0,63	0/1:15,0:14:88.69:124,0,89	0/1:14,0:11:9.77:29,0,10	1/1:15,0:15:1.63:81,2,0	0/1:14,0:14:0:0,0,1	0/0:10,0:9:0.37:0,0,1	1/1:30,0:28:47.67:713,48,0	0/0:15,0:13:0.52:0,1,1	0/1:11,0:11:99:177,0,238	0/1:11,0:10:82.90:124,0,83	1/1:6,0:5:2.91:20,3,0
chr10	38047004	.	GTGTGAA	G	3181.87	PASS	AB=0.964;AC=37;AF=0.661;AN=56;BaseQRankSum=-1.646;DP=461;FS=13.933;HRun=0;HaplotypeScore=100.2294;InbreedingCoeff=-0.0730;MQ=43.90;MQ0=26;MQRankSum=2.702;QD=7.88;ReadPosRankSum=-0.007;VQSLOD=1.1493;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:32,0:31:1.79:43,2,0	0/1:6,0:6:1.97:4,0,2	1/1:21,0:1:2.74:12,3,0	0/0:32,0:5:5.97:0,6,68	0/1:12,0:10:0:0,0,0	0/1:21,0:20:1.27:182,0,1	0/1:28,0:26:22.31:94,0,22	0/1:21,0:19:99:235,0,115	1/1:19,0:19:6:74,6,0	0/1:16,0:16:7.93:328,0,8	1/1:9,0:8:3.01:33,3,0	1/1:20,0:19:9.02:102,9,0	1/1:13,0:12:6.39:103,6,0	0/1:15,0:14:0:0,0,0	1/1:10,0:10:3.01:35,3,0	1/1:13,0:13:33.11:480,33,0	0/1:18,0:18:5.71:127,0,6	0/1:14,0:13:53.06:116,0,53	0/1:13,0:13:76.46:122,0,76	1/1:14,0:12:5.04:41,5,0	1/1:16,0:15:1.08:80,1,0	0/1:2,12:14:0.04:0,0,0	0/0:10,0:9:0.37:0,0,1	1/1:31,0:29:50.89:745,51,0	0/0:14,0:12:0.64:0,1,2	0/1:11,0:11:99:211,0,197	0/1:11,0:10:52.57:125,0,53	1/1:6,0:5:2.47:19,2,0
chr10	38047008	.	GAA	G	3474.08	PASS	AB=0.730;AC=39;AF=0.696;AN=56;BaseQRankSum=-0.620;DP=434;FS=0.000;HRun=2;HaplotypeScore=85.0830;InbreedingCoeff=0.0054;MQ=47.41;MQ0=27;MQRankSum=0.252;QD=8.66;ReadPosRankSum=3.789;VQSLOD=0.6543;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,24:29:0.85:41,1,0	1/1:1,3:4:5.07:64,5,0	0/1:26,3:5:0.07:0,0,124	0/1:32,4:7:0.60:1,0,103	0/1:2,9:9:0:0,0,0	0/1:14,6:19:0.81:169,0,1	0/1:21,8:27:6.39:186,0,6	0/1:10,8:16:99:229,0,122	1/1:17,2:19:5.98:46,6,0	0/1:4,11:15:9.32:339,0,9	1/1:3,5:7:3.01:33,3,0	1/1:0,18:17:9.02:102,9,0	1/1:12,0:11:5.98:46,6,0	0/1:1,13:13:0:0,0,0	1/1:9,0:9:3.01:35,3,0	1/1:13,0:13:36.10:495,36,0	1/1:16,1:17:9.87:86,10,0	0/1:10,2:11:30:154,0,30	0/1:7,5:12:68.94:154,0,69	1/1:8,3:9:5.88:65,6,0	1/1:9,3:11:0.78:79,1,0	0/0:12,0:12:0.47:0,0,1	0/0:1,8:8:0.26:0,0,1	1/1:21,6:25:51.07:718,51,0	0/0:6,6:10:2.21:0,2,8	0/1:7,3:10:76.54:270,0,77	1/1:3,7:9:6.58:146,7,0	1/1:1,4:5:2.17:18,2,0
chr10	38047022	.	G	GAA	62.51	PASS	AB=0.952;AC=14;AF=0.259;AN=54;BaseQRankSum=3.654;DP=449;FS=9.580;HRun=0;HaplotypeScore=108.1748;InbreedingCoeff=0.1214;MQ=50.29;MQ0=30;MQRankSum=-4.528;QD=0.44;ReadPosRankSum=-4.302;VQSLOD=-0.0644;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:31:15.30:0,15,264	0/0:3,0:3:6.80:0,7,43	0/0:49,0:13:29.13:0,29,402	0/0:46,0:13:32.67:0,33,445	0/0:11,0:9:8.98:0,9,134	0/1:20,0:19:17.69:18,0,70	0/1:30,1:29:32.48:32,0,195	0/0:14,0:13:29.71:0,30,316	0/0:17,0:17:6.02:0,6,86	0/1:11,0:11:10.82:11,0,193	1/1:8,0:7:4.78:25,5,0	0/0:14,0:14:7.97:0,8,58	0/0:13,0:12:8.96:0,9,125	0/0:13,0:12:3.01:0,3,45	0/0:12,0:12:12.04:0,12,167	0/0:13,0:13:25.87:0,26,345	0/0:17,0:17:9.02:0,9,107	0/1:10,1:10:15.06:15,0,200	0/1:10,1:11:30.91:31,0,230	1/1:10,1:9:4.10:29,4,0	1/1:16,0:14:1.10:3,1,0	0/0:13,0:13:8.72:0,9,135	0/0:6,0:5:3.01:0,3,45	0/0:20,0:18:33.10:0,33,472	1/1:12,0:10:0.08:0,0,0	0/0:14,0:14:39.18:0,39,485	0/1:9,1:9:34.39:34,0,99	./.
chr10	38047039	.	C	CTGTGGAGACCAG	8194.12	PASS	AB=1.000;AC=25;AF=0.463;AN=54;BaseQRankSum=0.222;DP=421;FS=2.607;HRun=0;HaplotypeScore=143.5419;InbreedingCoeff=0.8101;MQ=68.26;MQ0=14;MQRankSum=-9.458;QD=49.66;ReadPosRankSum=-2.956;VQSLOD=3.8202;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:27.09:0,27,969	1/1:3,0:4:5.23:154,5,0	0/0:48,0:19:42.05:0,42,971	0/0:45,0:21:47.93:0,48,1104	0/0:11,0:11:21.07:0,21,639	1/1:7,8:20:17.15:811,17,0	1/1:23,9:30:30.10:1026,30,0	1/1:11,0:12:33.10:1304,33,0	0/0:12,0:12:9.03:0,9,311	1/1:8,0:10:24.08:1097,24,0	1/1:4,0:5:3.01:48,3,0	0/0:14,0:14:9.03:0,9,323	0/0:10,0:10:12.04:0,12,431	0/0:17,0:17:24.08:0,24,776	0/0:10,0:10:15.05:0,15,489	0/0:16,0:16:39.13:0,39,1401	0/0:13,0:13:14.88:0,15,356	1/1:5,3:8:15.05:740,15,0	1/1:9,0:12:27.05:1256,27,0	1/1:8,3:13:6.02:138,6,0	1/1:16,0:16:5.61:136,6,0	0/0:12,0:12:18.92:0,19,593	0/0:6,0:6:9.03:0,9,295	0/0:18,0:18:36.03:0,36,1059	1/1:6,0:8:18.05:521,18,0	0/1:12,0:12:99:119,0,1015	1/1:8,0:11:21.07:845,21,0	./.
chr10	38047624	.	AC	A	21846.91	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=3.623;DP=680;FS=10.231;HRun=2;HaplotypeScore=124.5034;InbreedingCoeff=0.9989;MQ=82.17;MQ0=0;MQRankSum=-9.078;QD=33.98;ReadPosRankSum=6.027;VQSLOD=3.2236;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,42:42:99:1301,105,0	1/1:1,10:11:30.09:372,30,0	0/0:23,0:23:25.52:0,26,825	0/0:14,0:14:39.09:0,39,537	1/1:0,28:28:81.25:1003,81,0	1/1:0,27:27:78.25:967,78,0	1/1:0,20:20:57.18:706,57,0	1/1:1,26:27:75.22:918,75,0	1/1:4,23:27:72.21:879,72,0	1/1:2,18:20:57.17:696,57,0	1/1:0,18:18:54.17:669,54,0	1/1:0,21:21:57.18:707,57,0	1/1:1,21:23:63.20:777,63,0	1/1:1,22:23:66.21:818,66,0	1/1:2,24:26:72.23:891,72,0	1/1:1,21:22:60.19:745,60,0	1/1:1,25:26:69.22:855,69,0	1/1:0,27:27:75.24:930,75,0	1/1:2,14:16:42.11:506,42,0	1/1:0,16:16:45.14:558,45,0	1/1:0,33:33:93.29:1152,93,0	1/1:0,25:25:66.21:818,66,0	1/1:0,25:25:69.22:855,69,0	1/1:2,33:35:96.30:1190,96,0	1/1:1,21:22:60.19:744,60,0	1/1:1,27:28:81.25:1004,81,0	1/1:1,33:34:93.29:1153,93,0	1/1:1,20:21:51.16:632,51,0
chr10	38047909	.	CAT	C	12055.80	PASS	AB=1.000;AC=53;AF=0.946;AN=56;BaseQRankSum=-3.806;DP=424;FS=1.879;HRun=0;HaplotypeScore=57.8188;InbreedingCoeff=0.6195;MQ=79.20;MQ0=1;MQRankSum=-2.281;QD=29.19;ReadPosRankSum=3.421;VQSLOD=6.3025;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,22:25:63.20:810,63,0	1/1:1,1:2:3.01:39,3,0	0/0:11,0:11:11.67:0,12,92	0/1:14,0:12:1.60:14,0,2	1/1:2,17:19:42.14:540,42,0	1/1:3,16:19:42.14:540,42,0	1/1:0,8:8:21.07:270,21,0	1/1:4,36:40:99:1251,105,0	1/1:1,12:13:36.12:463,36,0	1/1:4,18:22:57.15:703,57,0	1/1:4,8:12:24.08:309,24,0	1/1:1,6:7:12.04:154,12,0	1/1:4,10:14:30.10:386,30,0	1/1:2,11:13:36.12:459,36,0	1/1:0,13:13:36.12:463,36,0	1/1:0,11:11:30.10:386,30,0	1/1:1,19:20:48.16:617,48,0	1/1:0,18:18:42.09:522,42,0	1/1:5,8:13:24.06:284,24,0	1/1:0,10:10:24.08:309,24,0	1/1:1,10:11:27.09:347,27,0	1/1:1,12:13:36.12:463,36,0	1/1:2,17:19:45.15:579,45,0	1/1:2,5:7:18.05:218,18,0	1/1:1,12:13:24.08:309,24,0	1/1:4,11:15:33.11:425,33,0	1/1:3,24:26:60.19:772,60,0	1/1:3,11:14:33.11:424,33,0
chr10	38048454	.	C	CT	5918.66	PASS	AB=0.583;AC=23;AF=0.411;AN=56;BaseQRankSum=-2.416;DP=632;FS=5.183;HRun=10;HaplotypeScore=83.6871;InbreedingCoeff=0.9176;MQ=81.70;MQ0=0;MQRankSum=-0.294;QD=19.60;ReadPosRankSum=2.470;VQSLOD=5.7731;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,4:38:65.80:358,66,0	0/0:6,0:6:17.98:0,18,148	0/0:22,0:23:28.72:0,29,212	0/0:13,0:13:20.54:0,21,172	1/1:2,26:29:80.93:804,81,0	0/0:18,0:18:50.94:0,51,419	0/0:19,0:19:50.92:0,51,418	0/0:38,0:38:65.84:0,66,541	1/1:7,16:24:20.17:387,20,0	0/0:31,0:31:65.89:0,66,542	0/0:25,0:25:50.87:0,51,413	1/1:7,31:38:47.54:711,48,0	1/1:3,17:22:41.89:418,42,0	0/1:6,15:21:6.90:336,0,7	1/1:4,25:30:42.45:596,42,0	1/1:4,22:26:38.50:607,39,0	1/1:2,16:19:47.95:494,48,0	0/0:17,0:17:35.93:0,36,295	0/0:23,0:23:44.88:0,45,367	0/0:22,0:22:56.91:0,57,467	0/0:19,0:20:40.96:0,41,326	1/1:1,12:13:36.09:382,36,0	1/1:3,19:22:4.82:409,5,0	1/1:2,18:20:39.10:416,39,0	0/0:14,0:14:32.94:0,33,271	0/0:20,0:20:41.91:0,42,345	0/0:27,0:27:71.84:0,72,584	0/0:13,0:13:35.96:0,36,296
chr10	38049058	.	C	CACCA	3191.21	PASS	AB=0.915;AC=25;AF=0.521;AN=48;BaseQRankSum=-3.009;DP=540;FS=5.558;HRun=0;HaplotypeScore=87.8634;InbreedingCoeff=0.2110;MQ=37.69;MQ0=96;MQRankSum=3.189;QD=8.70;ReadPosRankSum=2.230;VQSLOD=1.8212;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:26:21.64:0,22,460	0/1:15,0:11:1.69:150,0,2	0/0:42,0:5:11.77:0,12,114	0/0:48,0:7:20.47:0,20,209	./.	1/1:7,16:23:11.98:148,12,0	1/1:35,1:32:17.18:620,17,0	0/1:34,0:18:60.96:198,0,61	0/0:8,0:3:2.68:0,3,11	0/1:22,0:16:45.51:164,0,46	0/1:16,0:15:10.83:245,0,11	1/1:7,0:3:2.50:9,2,0	./.	./.	0/0:4,0:4:2.04:0,2,6	0/0:7,0:5:2.98:0,3,22	0/0:8,0:6:2.68:0,3,37	0/1:19,0:19:6.23:392,0,6	1/1:22,0:10:14.63:187,15,0	1/1:11,0:10:2.87:35,3,0	0/1:38,39:70:78.20:230,0,78	1/1:4,0:2:1.82:5,2,0	./.	0/0:5,0:2:2.68:0,3,11	1/1:26,0:25:18.30:418,18,0	0/1:23,0:17:74.51:262,0,75	1/1:7,0:6:12.04:180,12,0	1/1:8,0:7:8.82:102,9,0
chr10	38049060	.	A	ACA	3565.25	PASS	AB=1.000;AC=27;AF=0.614;AN=44;BaseQRankSum=-3.850;DP=534;FS=13.759;HRun=0;HaplotypeScore=76.3388;InbreedingCoeff=0.3475;MQ=37.52;MQ0=95;MQRankSum=2.943;QD=9.93;ReadPosRankSum=1.335;VQSLOD=2.3509;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:26:39.22:0,39,469	1/1:15,0:11:15.67:176,16,0	0/0:47,0:6:11.77:0,12,114	0/0:51,0:7:20.47:0,20,209	./.	1/1:24,0:23:8.99:126,9,0	1/1:38,0:31:14.64:621,15,0	0/1:31,0:17:60.72:200,0,61	0/0:6,0:2:2.68:0,3,11	0/1:21,0:15:17.54:175,0,18	1/1:17,0:15:18.05:266,18,0	1/1:7,0:3:2.21:9,2,0	./.	./.	0/1:4,0:4:0:0,0,0	./.	0/0:7,0:5:1.82:0,2,35	1/1:22,0:18:2.20:478,2,0	1/1:23,0:11:15.01:180,15,0	1/1:3,6:9:3.01:35,3,0	0/1:84,0:71:18.16:280,0,18	./.	./.	0/0:5,0:2:2.68:0,3,11	1/1:25,0:24:30.03:444,30,0	0/1:23,0:17:76.22:265,0,76	1/1:6,0:5:12.04:180,12,0	1/1:8,0:7:11.89:130,12,0
chr10	38049117	.	TACAC	T	1496.79	PASS	AB=0.896;AC=18;AF=0.409;AN=44;BaseQRankSum=-3.703;DP=537;FS=0.000;HRun=0;HaplotypeScore=85.4577;InbreedingCoeff=-0.0752;MQ=28.94;MQ0=138;MQRankSum=-0.305;QD=3.92;ReadPosRankSum=1.293;VQSLOD=1.5199;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:22:29.13:0,29,555	1/1:10,5:11:11.90:108,12,0	./.	0/0:29,0:3:6.02:0,6,75	0/0:10,0:2:6.01:0,6,72	1/1:13,3:11:5.58:101,6,0	0/1:36,3:30:99:190,0,127	0/1:62,2:39:99:181,0,101	0/1:9,0:3:0:0,0,0	0/1:29,4:21:99:245,0,131	0/1:12,2:13:4.50:45,0,5	./.	./.	0/0:8,0:2:0:0,0,0	0/0:7,0:3:3.01:0,3,61	./.	0/0:9,0:4:5.81:0,6,34	0/1:23,2:21:59.74:170,0,60	0/1:16,4:11:7.93:169,0,8	0/1:10,2:9:0:0,0,0	0/1:66,5:54:99:285,0,109	./.	1/1:6,0:2:0.47:1,0,0	./.	0/1:16,6:21:62.74:99,0,63	0/1:24,1:12:25.86:26,0,144	0/1:7,2:5:0:0,0,0	0/0:9,0:5:8.28:0,8,47
chr10	38049267	.	A	AGGATTGGAAG	26604.99	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-2.238;DP=599;FS=14.499;HRun=0;HaplotypeScore=159.6041;InbreedingCoeff=0.9472;MQ=91.31;MQ0=0;MQRankSum=-9.707;QD=50.29;ReadPosRankSum=5.409;VQSLOD=3.7245;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:28,2:30:53.77:860,54,0	1/1:3,6:10:17.98:776,18,0	0/0:40,0:40:71.18:0,71,1138	0/0:30,0:30:12.85:0,13,529	1/1:9,15:25:47.74:1162,48,0	1/1:19,4:23:41.82:998,42,0	1/1:8,13:24:12.04:522,12,0	1/1:18,0:21:45.08:805,45,0	1/1:21,7:29:73.41:1896,73,0	1/1:22,4:27:50.82:988,51,0	1/1:11,2:12:23.98:585,24,0	1/1:17,6:23:56.46:1861,56,0	1/1:12,6:19:48.10:1621,48,0	1/1:18,1:19:36:1124,36,0	1/1:24,1:25:71.80:1359,72,0	1/1:13,3:16:36.07:1348,36,0	1/1:20,3:23:42.05:1362,42,0	1/1:15,2:17:38.91:835,39,0	1/1:18,0:18:20.93:401,21,0	1/1:16,4:20:47.92:1088,48,0	1/1:17,0:17:20.91:372,21,0	1/1:19,4:24:41.97:1072,42,0	1/1:18,6:24:50.72:1401,51,0	1/1:7,10:18:15:625,15,0	1/1:3,18:22:24.08:1157,24,0	1/1:8,8:17:27.05:788,27,0	1/1:5,11:18:24.08:1045,24,0	1/1:5,2:7:18.01:553,18,0
chr10	38049625	.	CCAA	C	12709.49	PASS	AB=0.980;AC=50;AF=0.893;AN=56;BaseQRankSum=-4.667;DP=607;FS=0.485;HRun=0;HaplotypeScore=120.3741;InbreedingCoeff=0.4987;MQ=70.50;MQ0=2;MQRankSum=-3.649;QD=23.19;ReadPosRankSum=7.094;VQSLOD=4.3255;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:28:81.28:1232,81,0	1/1:8,0:8:4.12:214,4,0	0/0:32,0:22:50.50:0,51,670	0/0:27,0:21:54.01:0,54,704	1/1:2,14:15:35.33:493,35,0	0/1:23,1:24:10.80:435,0,11	1/1:30,0:29:73.09:1140,73,0	1/1:17,0:17:51.17:773,51,0	1/1:1,32:33:29.97:453,30,0	1/1:14,0:14:33.36:505,33,0	1/1:13,0:13:14.48:355,14,0	1/1:1,0:26:21.05:227,21,0	1/1:3,17:20:12.04:199,12,0	1/1:1,23:24:15.05:249,15,0	1/1:0,16:16:21.07:337,21,0	1/1:1,25:26:30.10:467,30,0	1/1:0,23:23:15.05:226,15,0	1/1:22,0:22:16.51:651,17,0	1/1:15,0:14:38.59:568,39,0	1/1:15,0:15:26.30:523,26,0	1/1:44,1:44:78.14:1422,78,0	1/1:1,14:15:26.98:434,27,0	1/1:0,0:16:2.43:33,2,0	1/1:4,0:42:3.01:32,3,0	1/1:15,0:15:18.18:525,18,0	1/1:3,14:17:39.08:530,39,0	0/1:22,0:22:18.24:409,0,18	1/1:6,0:6:18.06:275,18,0
chr10	38049628	.	A	AG	13033.80	PASS	AB=1.000;AC=51;AF=0.911;AN=56;BaseQRankSum=1.168;DP=594;FS=1.237;HRun=0;HaplotypeScore=103.6294;InbreedingCoeff=0.6055;MQ=67.72;MQ0=4;MQRankSum=-3.270;QD=24.09;ReadPosRankSum=6.729;VQSLOD=5.6603;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,28:28:81.27:1225,81,0	1/1:0,8:8:21.07:332,21,0	0/0:28,0:18:51.03:0,51,671	0/0:25,0:19:54.01:0,54,704	1/1:15,1:15:36.12:514,36,0	1/1:2,20:22:56:851,56,0	1/1:3,29:31:81.27:1266,81,0	1/1:0,17:17:51.17:801,51,0	0/1:33,0:32:3.99:10,0,4	1/1:0,13:13:37.01:570,37,0	1/1:1,12:12:30.10:474,30,0	1/1:26,0:26:12.94:33,13,0	1/1:18,0:18:4.53:35,5,0	1/1:23,0:23:8.95:24,9,0	1/1:16,0:16:7.74:26,8,0	1/1:25,0:25:3.23:19,3,0	1/1:23,0:23:7.29:137,7,0	1/1:0,22:22:63.21:977,63,0	1/1:2,14:15:42.14:653,42,0	1/1:1,14:15:39.13:598,39,0	1/1:3,44:46:99:1840,120,0	1/1:15,0:15:22:193,22,0	1/1:16,0:16:3.46:35,3,0	1/1:38,0:38:1.82:5,2,0	1/1:0,15:15:45.15:697,45,0	1/1:15,1:16:38.83:487,39,0	1/1:0,21:21:60.10:948,60,0	1/1:0,6:6:18.06:284,18,0
chr10	38050940	.	T	TAC	2102.13	PASS	AB=0.940;AC=38;AF=0.679;AN=56;BaseQRankSum=-2.740;DP=517;FS=4.569;HRun=0;HaplotypeScore=145.4833;InbreedingCoeff=0.0007;MQ=66.00;MQ0=2;MQRankSum=-1.310;QD=4.76;ReadPosRankSum=-1.992;VQSLOD=2.7206;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:36,0:36:1.99:159,2,0	1/1:6,0:6:4.97:55,5,0	0/0:24,0:12:33.10:0,33,516	0/0:24,0:16:48.15:0,48,724	1/1:15,0:15:7.53:94,8,0	1/1:24,0:23:9.35:78,9,0	1/1:27,0:27:12.83:122,13,0	0/1:21,0:21:51.95:52,0,53	0/1:15,2:17:17.87:122,0,18	0/1:15,0:15:10.70:64,0,11	1/1:9,0:8:1.88:23,2,0	1/1:22,0:22:1.96:23,2,0	0/1:14,5:20:39.17:182,0,39	0/1:20,1:21:1.21:179,0,1	1/1:12,1:13:14.92:149,15,0	0/1:10,4:14:24.49:185,0,24	1/1:23,3:26:5.25:280,5,0	0/1:21,0:21:27.31:27,0,109	0/1:14,0:13:5.82:42,0,6	1/1:14,0:11:5.11:42,5,0	0/1:40,0:39:59.80:60,0,91	1/1:10,2:12:4.34:132,4,0	1/1:17,0:17:1.69:23,2,0	0/0:22,0:22:3.09:0,3,18	1/1:16,0:14:11.05:96,11,0	0/1:14,0:14:38.87:68,0,39	1/1:7,0:7:0.89:2,1,0	0/0:5,0:5:8.30:0,8,40
chr10	38050942	.	CGTGCGTGTGTGT	C	3197.39	PASS	AB=1.000;AC=28;AF=0.500;AN=56;BaseQRankSum=-9.161;DP=542;FS=9.112;HRun=0;HaplotypeScore=205.8916;InbreedingCoeff=-0.3689;MQ=64.52;MQ0=2;MQRankSum=1.057;QD=6.97;ReadPosRankSum=-4.121;VQSLOD=0.8465;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:38,0:38:99:108,0,1055	0/1:6,0:6:36.89:37,0,139	0/0:24,0:12:27.01:0,27,307	0/0:24,0:16:37.46:0,37,369	0/1:16,0:17:99:138,0,256	0/1:23,0:22:70.10:70,0,346	0/1:25,0:25:97.99:98,0,467	0/1:24,0:22:99:199,0,564	0/1:16,0:16:96.22:96,0,788	0/1:14,0:14:99:201,0,228	0/1:9,0:8:60.26:60,0,128	1/1:3,20:23:30.10:1034,30,0	0/1:25,0:25:41.53:42,0,1449	0/1:21,0:21:22.79:23,0,1348	0/1:21,0:21:12.92:13,0,786	0/0:14,0:14:8.16:0,8,1129	0/1:27,0:27:44.56:45,0,1485	0/1:20,0:20:99:125,0,835	0/1:14,0:13:99:179,0,174	1/1:14,0:11:3.47:26,3,0	0/1:39,0:38:99:233,0,325	0/1:15,0:15:42.57:43,0,511	1/1:1,14:16:3.01:85,3,0	1/1:1,21:23:12.04:423,12,0	1/1:16,0:14:9.46:75,9,0	0/1:13,0:13:10.93:11,0,625	0/0:0,0:15:3.01:0,3,130	0/0:6,0:6:18.02:0,18,465
chr10	38050980	.	T	TG	2387.30	PASS	AB=0.900;AC=21;AF=0.375;AN=56;BaseQRankSum=-0.169;DP=528;FS=3.866;HRun=8;HaplotypeScore=127.0686;InbreedingCoeff=0.6148;MQ=58.91;MQ0=6;MQRankSum=0.058;QD=10.42;ReadPosRankSum=-1.687;VQSLOD=1.8242;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:32.51:0,33,301	1/1:3,0:3:0.89:2,1,0	0/0:26,0:15:38.58:0,39,338	0/0:19,0:12:22.86:0,23,213	0/1:5,5:10:9.87:132,0,10	0/1:23,0:22:2.66:3,0,156	0/0:28,0:27:25.46:0,25,244	0/0:27,0:25:48.01:0,48,439	1/1:3,9:12:21.52:233,22,0	0/0:16,0:16:27:0,27,243	0/1:4,1:4:20.98:29,0,21	0/0:33,0:33:23.20:0,23,216	1/1:11,11:22:21.02:215,21,0	1/1:6,14:20:24.07:277,24,0	1/1:3,18:22:40.76:437,41,0	1/1:8,15:23:60.10:643,60,0	1/1:14,20:34:44.87:439,45,0	0/0:26,0:24:41.89:0,42,373	0/0:11,0:12:23.04:0,23,207	0/0:13,0:10:9:0,9,82	0/0:28,0:27:23.15:0,23,218	1/1:7,7:14:15:159,15,0	0/0:13,0:13:14.69:0,15,134	0/1:28,0:27:5.40:5,0,142	0/1:10,0:10:10.32:10,0,46	0/0:5,0:5:9:0,9,81	0/0:18,0:18:20.86:0,21,179	0/0:8,0:8:14.99:0,15,137
chr10	38051157	.	TGGGGG	T	21979.98	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-4.144;DP=551;FS=2.880;HRun=11;HaplotypeScore=127.6969;InbreedingCoeff=0.9080;MQ=67.20;MQ0=0;MQRankSum=-6.229;QD=42.51;ReadPosRankSum=5.888;VQSLOD=3.1408;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,40:45:99:1843,102,0	1/1:1,3:4:9.03:161,9,0	0/0:21,0:21:21.45:0,21,820	0/0:11,0:11:26.32:0,26,592	1/1:0,14:14:36.12:652,36,0	1/1:3,16:19:45.14:818,45,0	1/1:5,19:24:48.14:873,48,0	1/1:4,29:33:87.24:1514,87,0	1/1:0,21:21:57.20:1036,57,0	1/1:1,20:21:54.17:982,54,0	1/1:0,7:7:15.05:270,15,0	1/1:2,25:27:66.22:1200,66,0	1/1:2,16:18:45.14:816,45,0	1/1:4,24:28:60.18:1090,60,0	1/1:1,25:26:66.22:1200,66,0	1/1:4,21:25:60.18:1091,60,0	1/1:3,27:30:69.22:1255,69,0	1/1:2,18:20:54.17:962,54,0	1/1:0,7:7:21.07:382,21,0	1/1:2,9:11:21.05:382,21,0	1/1:4,15:19:33.10:600,33,0	1/1:3,17:20:45.60:818,46,0	1/1:1,11:12:30.09:545,30,0	1/1:4,30:34:72.22:1309,72,0	1/1:1,12:13:33.10:600,33,0	1/1:2,20:22:48.12:873,48,0	1/1:3,12:15:33.09:600,33,0	1/1:0,2:2:6.02:109,6,0
chr10	38051388	.	GCACACA	G	9312.11	PASS	AB=0.852;AC=48;AF=0.857;AN=56;BaseQRankSum=1.100;DP=699;FS=3.331;HRun=0;HaplotypeScore=259.7906;InbreedingCoeff=0.2613;MQ=45.91;MQ0=19;MQRankSum=1.114;QD=15.27;ReadPosRankSum=2.909;VQSLOD=3.7892;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:32,9:42:1.65:252,0,2	1/1:4,6:10:15.02:226,15,0	0/0:39,0:16:2.99:0,3,23	0/0:50,0:24:8.97:0,9,89	1/1:7,6:14:12.96:161,13,0	1/1:17,6:24:23.97:360,24,0	1/1:15,10:27:12.75:338,13,0	1/1:16,13:29:35.78:394,36,0	1/1:12,13:26:42.13:747,42,0	1/1:17,8:23:31.34:614,31,0	1/1:10,2:12:5.20:96,5,0	1/1:18,0:37:42.54:637,43,0	1/1:14,12:26:44.35:735,44,0	1/1:13,15:29:30.12:685,30,0	1/1:13,13:25:20.29:386,20,0	1/1:4,15:20:27.08:511,27,0	1/1:23,3:27:6.95:255,7,0	1/1:29,6:35:29.84:630,30,0	0/1:22,2:22:9.51:211,0,10	1/1:9,8:17:9.71:87,10,0	0/1:40,6:44:20.05:132,0,20	1/1:5,5:11:8.92:128,9,0	1/1:5,0:9:2.28:12,2,0	0/1:25,0:33:11.69:41,0,12	1/1:8,6:14:19.09:355,19,0	1/1:12,8:20:43.86:692,44,0	1/1:9,8:18:33.10:583,33,0	1/1:2,0:2:3.01:45,3,0
chr10	38051457	.	C	CAATT	39219.54	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-2.069;DP=707;FS=9.426;HRun=0;HaplotypeScore=209.2322;InbreedingCoeff=0.9971;MQ=62.13;MQ0=2;MQRankSum=-7.377;QD=61.67;ReadPosRankSum=1.697;VQSLOD=5.5378;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,26:35:90.31:1760,90,0	1/1:3,10:13:36.09:823,36,0	0/0:26,0:20:47.65:0,48,851	0/0:45,0:36:65.83:0,66,1412	1/1:3,19:22:51.16:1104,51,0	1/1:3,14:18:45.15:1106,45,0	1/1:6,27:34:88.54:2114,89,0	1/1:5,18:28:78.23:1915,78,0	1/1:4,18:22:60.20:1497,60,0	1/1:3,22:28:78.25:2015,78,0	1/1:3,8:12:27.09:581,27,0	1/1:9,24:34:90.17:2006,90,0	1/1:3,18:21:60.21:1616,60,0	1/1:4,28:33:99:2469,99,0	1/1:2,22:24:60.21:1400,60,0	1/1:2,22:24:66.23:1706,66,0	1/1:4,26:31:81.23:2105,81,0	1/1:10,19:30:63.22:1667,63,0	1/1:6,16:24:72.18:1755,72,0	1/1:2,18:20:58.44:1207,58,0	1/1:5,35:43:99:2341,99,0	1/1:1,11:12:33.11:713,33,0	1/1:1,16:17:45.04:895,45,0	1/1:5,26:31:65.67:1543,66,0	1/1:1,19:20:54.18:1302,54,0	1/1:7,24:31:84.24:2199,84,0	1/1:2,10:16:39.09:906,39,0	1/1:0,10:10:21.07:476,21,0
chr10	38051624	.	T	TA	13876.49	PASS	AB=0.667;AC=51;AF=0.911;AN=56;BaseQRankSum=-2.784;DP=498;FS=4.016;HRun=0;HaplotypeScore=91.9104;InbreedingCoeff=0.7873;MQ=67.32;MQ0=1;MQRankSum=-3.895;QD=29.40;ReadPosRankSum=7.640;VQSLOD=4.5869;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,34:37:97.14:1140,97,0	1/1:0,9:9:27.07:307,27,0	0/0:18,0:14:39.91:0,40,492	0/0:8,0:7:15.52:0,16,195	1/1:3,17:20:44.99:577,45,0	1/1:3,19:22:47.73:588,48,0	1/1:2,8:10:19.67:235,20,0	1/1:5,40:45:99:1340,115,0	1/1:1,11:12:33.06:382,33,0	1/1:4,16:20:49.74:597,50,0	1/1:3,19:22:53.59:634,54,0	1/1:1,12:13:33.04:371,33,0	1/1:1,18:19:47.47:550,47,0	1/1:2,15:17:40:465,40,0	1/1:1,18:19:42.81:511,43,0	1/1:1,17:18:54.13:608,54,0	1/1:0,28:28:69.20:800,69,0	1/1:1,25:26:58.42:703,58,0	1/1:5,15:20:47.65:520,48,0	1/1:1,12:13:32.82:369,33,0	1/1:0,5:5:15.04:175,15,0	0/1:2,2:4:8.21:59,0,8	1/1:1,13:14:35.89:413,36,0	1/1:0,8:8:21.06:241,21,0	1/1:0,17:17:51.15:597,51,0	1/1:1,26:27:75.75:862,76,0	1/1:2,15:17:40.97:489,41,0	1/1:0,10:10:30.09:342,30,0
chr10	38052592	.	A	ACCTGC	2729.24	PASS	AB=0.524;AC=3;AF=0.054;AN=56;BaseQRankSum=-4.907;DP=762;FS=2.261;HRun=0;HaplotypeScore=137.4145;InbreedingCoeff=0.6459;MQ=90.60;MQ0=0;MQRankSum=-5.684;QD=71.82;ReadPosRankSum=0.212;VQSLOD=4.9771;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:60,0:59:99:0,169,3438	0/0:7,0:7:21.07:0,21,435	0/0:30,0:29:81.28:0,81,1630	0/0:35,0:35:90.21:0,90,1806	0/0:23,0:23:60.21:0,60,1242	0/0:19,0:19:48.16:0,48,995	0/0:29,0:29:75.26:0,75,1507	0/0:29,0:29:78.27:0,78,1617	0/0:26,0:26:75.26:0,75,1552	0/0:20,0:20:60.21:0,60,1215	0/0:24,0:24:72.23:0,72,1436	0/0:29,0:29:87.30:0,87,1785	0/0:35,0:35:99:0,99,2051	0/0:23,0:23:60.21:0,60,1243	0/0:36,0:36:99:0,105,2137	0/0:25,0:25:75.24:0,75,1481	0/0:36,0:36:99:0,108,2163	0/0:20,0:20:60.16:0,60,1181	0/0:23,0:23:57.15:0,57,1081	0/0:34,0:34:93.32:0,93,1927	0/0:28,0:28:81.26:0,81,1640	0/0:25,0:25:72.24:0,72,1453	0/0:19,0:19:48.15:0,48,957	0/0:41,0:41:99:0,120,2350	0/0:26,0:26:69.22:0,69,1393	0/1:2,20:22:58.20:1710,0,58	0/0:22,0:20:60.21:0,60,1242	1/1:5,11:16:39.10:1125,39,0
chr10	38052696	.	T	TG	21808.55	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-9.927;DP=724;FS=6.239;HRun=5;HaplotypeScore=70.6691;InbreedingCoeff=0.9825;MQ=92.27;MQ0=0;MQRankSum=-11.231;QD=32.79;ReadPosRankSum=7.206;VQSLOD=4.4774;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:3,40:43:99:1420,108,0	1/1:1,6:7:12.04:158,12,0	0/0:36,0:36:92.99:0,93,909	0/0:23,0:22:33.04:0,33,458	1/1:1,9:10:24.08:316,24,0	1/1:1,19:20:54.18:709,54,0	1/1:2,21:23:33.32:687,33,0	1/1:2,18:20:51.17:671,51,0	1/1:4,25:29:69.22:907,69,0	1/1:1,22:23:63.18:799,63,0	1/1:3,13:16:39.04:482,39,0	1/1:3,25:28:63.20:829,63,0	1/1:4,27:31:69.22:908,69,0	1/1:1,29:30:78.25:1025,78,0	1/1:2,37:39:99:1342,102,0	1/1:2,32:34:93.30:1224,93,0	1/1:0,31:31:84.27:1105,84,0	1/1:1,16:17:48.16:632,48,0	1/1:4,23:27:72.20:911,72,0	1/1:4,20:24:57.18:739,57,0	1/1:4,44:48:99:1618,123,0	1/1:5,29:34:75.24:984,75,0	1/1:1,18:19:39.13:513,39,0	1/1:0,26:26:69.22:908,69,0	1/1:1,19:20:54.18:711,54,0	1/1:3,24:27:72.20:915,72,0	1/1:1,28:27:72.23:942,72,0	1/1:1,9:10:27.09:355,27,0
chr10	38054473	.	T	TAGAATCTGCTGCGAACCAGGCTGTC	36050.56	PASS	AB=0.757;AC=54;AF=0.964;AN=56;BaseQRankSum=-0.544;DP=273;FS=34.649;HRun=0;HaplotypeScore=324.9404;InbreedingCoeff=-0.0526;MQ=55.19;MQ0=0;MQRankSum=-2.857;QD=132.05;ReadPosRankSum=2.166;VQSLOD=3.0477;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,0:8:18.06:811,18,0	1/1:4,0:4:9.03:535,9,0	0/1:3,0:4:22.18:348,0,22	0/1:3,1:5:9.31:623,0,9	1/1:3,0:3:6.02:289,6,0	1/1:6,0:6:15.05:446,15,0	1/1:17,0:18:54.19:3020,54,0	1/1:8,0:8:24.08:1622,24,0	1/1:14,0:14:30.10:1790,30,0	1/1:11,0:11:32.98:1282,33,0	1/1:6,0:8:9.03:414,9,0	1/1:17,0:17:45.15:3494,45,0	1/1:17,0:18:43:2780,43,0	1/1:16,0:17:38.98:2251,39,0	1/1:18,0:18:41.95:2273,42,0	1/1:7,0:8:12.02:781,12,0	1/1:9,0:9:18.05:1002,18,0	1/1:14,0:14:24.08:2038,24,0	1/1:6,0:6:15.04:502,15,0	1/1:5,0:5:12.03:359,12,0	1/1:8,0:10:21.07:1253,21,0	1/1:8,0:8:18.06:854,18,0	1/1:3,0:3:6.02:370,6,0	1/1:11,0:11:27.09:1817,27,0	1/1:6,0:7:15.05:879,15,0	1/1:15,0:15:38.56:1648,39,0	1/1:9,0:10:23.86:1037,24,0	1/1:7,0:7:21.07:1536,21,0
chr10	38055014	.	GGGAACTC	G	7085.01	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=9.032;DP=389;FS=107.467;HRun=0;HaplotypeScore=111.5201;InbreedingCoeff=0.9615;MQ=69.64;MQ0=0;MQRankSum=-7.818;QD=46.61;ReadPosRankSum=5.252;VQSLOD=1.1867;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:69.24:0,69,2456	1/1:0,6:6:15.05:395,15,0	0/0:20,0:18:56.57:0,57,1864	0/0:13,0:13:39.13:0,39,1457	0/0:17,0:17:36.33:0,36,1172	1/1:0,11:11:15.05:395,15,0	1/1:2,15:17:27.02:649,27,0	1/1:4,7:11:21.07:553,21,0	0/0:15,0:15:45.15:0,45,1643	1/1:1,16:17:45.14:1131,45,0	1/1:1,5:6:6.02:158,6,0	0/0:23,0:23:63.22:0,63,2390	0/0:13,0:13:39.13:0,39,1487	0/0:14,0:14:36.12:0,36,1285	0/0:20,0:20:60.20:0,60,2165	0/0:15,0:15:45.15:0,45,1697	0/0:8,0:8:24.08:0,24,914	1/1:1,13:14:27.02:650,27,0	1/1:5,6:11:18.06:474,18,0	1/1:2,11:13:33.11:866,33,0	1/1:3,16:19:8.99:237,9,0	0/0:13,0:13:33.11:0,33,1226	0/0:10,0:10:30.10:0,30,1169	0/0:12,0:12:30.10:0,30,961	1/1:1,10:11:21.07:552,21,0	0/0:16,0:16:45.15:0,45,1690	1/1:2,14:16:39.13:1026,39,0	0/0:3,0:3:9.03:0,9,362
chr10	38055663	.	T	TACACACACACACAC	16598.24	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-3.505;DP=659;FS=4.686;HRun=0;HaplotypeScore=295.5720;InbreedingCoeff=0.5293;MQ=54.48;MQ0=3;MQRankSum=-3.103;QD=28.37;ReadPosRankSum=6.202;VQSLOD=2.7071;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:36,0:36:16.71:285,17,0	1/1:7,0:7:6.02:312,6,0	0/0:37,0:25:47.62:0,48,835	0/0:33,0:25:31.61:0,32,573	1/1:10,13:26:6.02:345,6,0	1/1:17,0:24:4.12:198,4,0	1/1:21,0:21:30.03:462,30,0	1/1:31,0:31:36.07:915,36,0	1/1:11,5:20:18.06:900,18,0	1/1:25,0:24:57.18:1609,57,0	1/1:28,0:28:7.26:139,7,0	1/1:28,0:26:27.49:824,27,0	1/1:8,15:28:24.31:1095,24,0	1/1:8,7:18:6.49:260,6,0	1/1:13,13:31:15.05:835,15,0	1/1:10,9:22:15.45:673,15,0	1/1:13,0:21:18.06:549,18,0	1/1:11,0:11:12.04:356,12,0	1/1:22,0:22:33.11:837,33,0	1/1:21,0:20:2.06:72,2,0	1/1:12,0:11:3.48:57,3,0	1/1:9,12:23:1.11:85,1,0	1/1:17,0:17:4.59:142,5,0	1/1:20,0:18:8.87:192,9,0	1/1:22,0:22:9.03:327,9,0	1/1:9,0:30:70.36:2634,70,0	1/1:29,0:28:47.86:1846,48,0	1/1:3,0:11:21.07:650,21,0
chr10	38059031	.	A	AC	1422.93	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-9.243;DP=649;FS=7.659;HRun=4;HaplotypeScore=75.8536;InbreedingCoeff=0.9975;MQ=91.22;MQ0=0;MQRankSum=-2.024;QD=31.62;ReadPosRankSum=1.174;VQSLOD=4.0651;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,41:45:99:1518,111,0	0/0:9,0:9:24.07:0,24,270	0/0:25,0:25:68.81:0,69,748	0/0:30,0:30:64.99:0,65,711	0/0:17,0:17:51.15:0,51,578	0/0:27,0:27:81.23:0,81,918	0/0:24,0:24:63.12:0,63,690	0/0:25,0:25:69.20:0,69,783	0/0:19,0:19:51.14:0,51,579	0/0:30,0:30:84.24:0,84,953	0/0:17,0:17:45.12:0,45,501	0/0:22,0:22:66.19:0,66,749	0/0:21,0:21:63.18:0,63,715	0/0:15,0:15:36.10:0,36,408	0/0:34,0:34:99:0,99,1113	0/0:19,0:19:54.14:0,54,603	0/0:23,0:23:69.18:0,69,772	0/0:16,0:16:45.11:0,45,498	0/0:22,0:21:57.15:0,57,639	0/0:17,0:17:45.11:0,45,500	0/0:31,0:31:81.21:0,81,908	0/0:16,0:16:45.13:0,45,510	0/0:14,0:14:39.11:0,39,442	0/0:28,0:28:75.21:0,75,850	0/0:29,0:29:80.51:0,81,917	0/0:32,0:32:84.24:0,84,950	0/0:31,0:31:87.23:0,87,977	0/0:11,0:11:33.09:0,33,374
chr10	38060486	.	A	AT	736.49	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=-3.524;DP=372;FS=1.692;HRun=8;HaplotypeScore=64.3718;InbreedingCoeff=0.5335;MQ=64.87;MQ0=1;MQRankSum=0.020;QD=18.41;ReadPosRankSum=1.286;VQSLOD=3.6494;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:21:45.02:0,45,412	0/0:8,0:8:15:0,15,136	0/0:10,0:10:20.52:0,21,160	0/1:9,0:8:15.17:15,0,69	0/0:22,0:22:45.02:0,45,412	0/0:23,0:21:45.02:0,45,406	0/0:7,0:7:10.25:0,10,84	0/0:45,0:44:85.05:0,85,763	0/0:7,0:7:18.01:0,18,165	0/0:12,0:12:32.97:0,33,296	0/0:9,0:9:15.01:0,15,137	0/0:9,0:9:15:0,15,137	0/0:13,0:13:27.01:0,27,247	0/0:4,0:4:12.01:0,12,109	0/0:17,0:17:48.03:0,48,439	0/0:8,0:8:21.01:0,21,192	0/0:22,0:21:45.01:0,45,412	0/0:26,0:24:41.84:0,42,382	0/0:17,0:16:36.02:0,36,327	0/0:8,0:8:18.01:0,18,165	0/0:3,0:3:3:0,3,27	0/0:6,0:6:5.99:0,6,55	0/0:7,0:7:15.01:0,15,137	0/0:4,0:3:6:0,6,55	0/0:11,0:11:32.99:0,33,294	1/1:3,9:12:2.62:284,3,0	0/0:12,0:12:32.99:0,33,291	1/1:3,16:19:48.14:554,48,0
chr10	38060496	.	G	GATTTATTT	5079.75	PASS	AB=1.000;AC=23;AF=0.426;AN=54;BaseQRankSum=-6.088;DP=325;FS=15.691;HRun=0;HaplotypeScore=81.6142;InbreedingCoeff=0.7127;MQ=57.20;MQ0=1;MQRankSum=-8.022;QD=29.88;ReadPosRankSum=-2.055;VQSLOD=2.5068;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:24:45.11:0,45,1035	1/1:3,3:6:6.02:218,6,0	0/0:6,0:6:6.02:0,6,83	0/0:6,0:5:5.99:0,6,66	0/0:16,0:16:23.94:0,24,392	1/1:6,16:21:33.11:1245,33,0	1/1:2,3:6:9.03:256,9,0	1/1:35,0:34:36.08:595,36,0	0/0:8,0:8:15.03:0,15,276	1/1:7,2:9:6.02:166,6,0	1/1:4,4:8:6.02:199,6,0	0/0:4,0:4:3.01:0,3,77	0/0:10,0:10:24.08:0,24,587	0/0:5,0:5:9.03:0,9,192	0/0:19,0:19:36.12:0,36,857	0/0:7,0:7:12.04:0,12,308	0/0:19,0:18:33.10:0,33,788	1/1:13,9:23:18.06:618,18,0	1/1:13,3:15:15.05:449,15,0	1/1:5,1:6:3.01:93,3,0	./.	0/0:3,0:3:3.01:0,3,76	0/0:5,0:5:6.02:0,6,135	0/0:4,0:3:5.98:0,6,97	1/1:6,4:11:15.05:548,15,0	0/1:14,0:14:29.11:29,0,622	1/1:4,7:11:18.06:664,18,0	0/0:17,0:17:30.01:0,30,569
chr10	38061310	.	T	TA	1787.12	PASS	AB=1.000;AC=49;AF=0.942;AN=52;BaseQRankSum=2.033;DP=299;FS=12.439;HRun=4;HaplotypeScore=123.5489;InbreedingCoeff=0.3931;MQ=42.67;MQ0=0;MQRankSum=0.004;QD=6.14;ReadPosRankSum=2.111;VQSLOD=-0.1261;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,6:8:14.02:63,14,0	0/1:6,0:6:0:0,0,0	1/1:2,0:2:2.90:16,3,0	0/0:1,0:1:2.68:0,3,11	1/1:12,0:12:7.46:27,7,0	1/1:7,0:7:5.62:36,6,0	1/1:10,0:10:24.18:105,24,0	1/1:11,0:11:29.83:143,30,0	1/1:10,0:10:10.36:42,10,0	1/1:16,0:16:31.26:159,31,0	1/1:20,0:20:29.58:131,30,0	1/1:4,4:8:10.78:47,11,0	1/1:12,0:12:11.08:51,11,0	1/1:6,0:6:13.78:62,14,0	1/1:10,0:10:22.12:101,22,0	1/1:9,0:9:5.54:26,6,0	./.	1/1:9,0:9:14.96:71,15,0	1/1:8,0:8:20.88:104,21,0	1/1:16,0:16:11.19:44,11,0	./.	1/1:19,0:20:8.48:54,8,0	1/1:6,11:17:30.18:135,30,0	1/1:1,5:6:10.75:45,11,0	1/1:12,0:12:13.05:54,13,0	1/1:18,0:18:35.77:162,36,0	1/1:24,0:24:35.08:156,35,0	1/1:14,0:14:8.39:38,8,0
chr10	38062095	.	CGT	C	5157.86	PASS	AC=22;AF=0.407;AN=54;BaseQRankSum=9.453;DP=300;FS=76.181;HRun=0;HaplotypeScore=43.2604;InbreedingCoeff=0.9503;MQ=83.39;MQ0=0;MQRankSum=-1.732;QD=41.60;ReadPosRankSum=4.544;VQSLOD=1.3109;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,28:28:75.25:1148,75,0	0/0:1,0:1:3.01:0,3,58	0/0:10,0:10:30.10:0,30,569	0/0:10,0:10:27.67:0,28,438	1/1:0,6:6:15.05:230,15,0	0/0:13,0:13:39.10:0,39,677	0/0:21,0:21:63.22:0,63,1202	0/0:16,0:16:48.15:0,48,862	1/1:0,7:7:21.07:318,21,0	0/0:11,0:11:30.09:0,30,547	0/0:8,0:8:21.06:0,21,364	1/1:1,8:9:27.08:392,27,0	1/1:0,8:8:21.07:320,21,0	1/1:0,9:9:24.08:365,24,0	./.	1/1:0,11:11:30.10:458,30,0	1/1:0,17:17:48.16:734,48,0	0/0:16,0:16:48.16:0,48,927	0/0:9,0:9:27.09:0,27,492	0/0:3,0:3:9.03:0,9,174	0/0:23,0:23:69.20:0,69,1295	1/1:0,7:7:21.07:321,21,0	1/1:0,5:5:12.04:184,12,0	1/1:0,17:17:45.15:688,45,0	0/0:14,0:14:42.14:0,42,811	0/0:6,0:6:18.05:0,18,318	0/0:11,0:11:33.11:0,33,628	0/0:4,0:4:12.04:0,12,232
chr10	38062305	.	GCTGCCGGCTCTCGTGGGGGCTGGGGA	G	18643.17	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=13.924;DP=467;FS=6.329;HRun=0;HaplotypeScore=313.1384;InbreedingCoeff=0.9608;MQ=76.69;MQ0=0;MQRankSum=-13.976;QD=105.33;ReadPosRankSum=6.747;VQSLOD=3.0106;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:16,13:29:36.12:2360,36,0	0/0:3,0:3:9.03:0,9,1094	0/0:15,0:15:42.14:0,42,2692	0/0:16,0:16:45.15:0,45,2945	1/1:4,8:12:15.05:636,15,0	0/0:21,0:21:63.22:0,63,6963	0/0:24,0:24:72.25:0,72,7262	0/0:23,0:23:60.21:0,60,5059	1/1:3,9:12:24.08:1605,24,0	0/0:22,0:22:66.21:0,66,5876	0/0:9,0:9:27.09:0,27,3029	1/1:8,17:25:39.13:2729,39,0	1/1:1,10:11:24.08:1651,24,0	1/1:5,12:17:30.10:2118,30,0	1/1:6,12:18:33.11:2330,33,0	1/1:4,10:14:30.10:2119,30,0	1/1:3,11:14:21.07:1412,21,0	0/0:28,0:28:84.26:0,84,8945	0/0:23,0:23:64.07:0,64,5678	0/0:8,0:8:24.08:0,24,2168	0/0:34,0:34:99:0,99,10076	1/1:6,4:10:9.03:636,9,0	1/1:3,3:6:6.02:424,6,0	1/1:3,6:9:12.04:625,12,0	0/0:12,0:12:36.12:0,36,3985	0/0:21,0:21:63.22:0,63,6886	0/0:20,0:20:60.17:0,60,5984	0/0:11,0:11:33.11:0,33,3553
chr10	38062848	.	TTCTCTC	T	1835.05	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=-5.783;DP=528;FS=0.000;HRun=0;HaplotypeScore=170.7497;InbreedingCoeff=-0.3076;MQ=56.24;MQ0=24;MQRankSum=-2.128;QD=6.24;ReadPosRankSum=-3.647;VQSLOD=1.6962;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:0.51:0,1,435	0/1:11,0:11:55.70:56,0,205	0/0:19,0:13:12.67:0,13,174	0/0:22,0:10:7.78:0,8,116	0/1:26,0:26:0.04:0,0,357	0/1:26,0:21:99:115,0,327	0/1:11,0:9:47.05:47,0,129	1/1:9,17:23:48.05:766,48,0	0/1:13,0:13:46:46,0,135	0/1:23,0:21:88.05:88,0,391	0/1:18,0:15:99:166,0,220	0/1:17,0:17:34.21:34,0,340	0/0:14,0:14:7.73:0,8,191	0/0:9,0:9:2.60:0,3,10	0/1:25,0:25:99:112,0,461	0/0:15,0:15:6.24:0,6,240	0/0:24,0:24:47.74:0,48,896	0/0:21,0:19:8.51:0,9,92	0/1:23,0:20:99:229,0,351	0/1:24,0:21:99:134,0,500	0/0:5,0:4:6.02:0,6,87	0/1:8,0:8:1.91:2,0,135	0/1:14,0:14:43.62:44,0,219	0/1:9,0:9:19.09:19,0,131	0/0:35,0:29:3.53:0,4,645	0/0:33,0:33:81.86:0,82,1849	0/1:19,0:18:99:128,0,210	0/0:19,0:18:33.11:0,33,720
chr10	38062850	.	C	CTT	3576.40	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=5.866;DP=526;FS=14.562;HRun=3;HaplotypeScore=133.4311;InbreedingCoeff=0.1538;MQ=54.09;MQ0=24;MQRankSum=1.353;QD=8.96;ReadPosRankSum=0.701;VQSLOD=-0.4997;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:30.50:0,31,392	0/1:11,0:11:7.78:8,0,83	0/1:19,0:13:1.26:1,0,232	0/0:19,0:8:11.07:0,11,110	1/1:20,6:26:56.07:722,56,0	0/1:26,0:21:39.80:40,0,51	0/1:10,0:8:18.58:19,0,40	0/1:26,0:23:19.44:19,0,261	1/1:11,1:12:25.93:251,26,0	0/1:23,0:21:4.14:4,0,129	0/1:20,0:17:2.22:2,0,105	0/0:17,0:16:11.71:0,12,366	1/1:11,3:14:36.85:408,37,0	1/1:1,7:8:3.01:56,3,0	1/1:22,2:24:62.12:551,62,0	1/1:14,1:15:32.95:312,33,0	1/1:6,19:25:47.40:770,47,0	0/1:22,0:20:9.16:9,0,11	0/1:26,0:23:48.89:49,0,160	0/1:25,0:22:48.75:50,0,49	0/1:5,0:4:4.98:5,0,18	1/1:7,2:9:20.92:230,21,0	0/0:12,0:12:28.37:0,28,319	0/0:9,0:9:16.44:0,16,164	0/1:34,0:28:33.50:49,0,33	0/0:32,0:32:52.01:0,52,921	0/1:19,0:18:20.47:20,0,51	0/0:19,0:18:22.71:0,23,472
chr10	38062858	.	C	CTT	325.97	PASS	AB=0.974;AC=16;AF=0.286;AN=56;BaseQRankSum=3.170;DP=520;FS=2.296;HRun=1;HaplotypeScore=146.0435;InbreedingCoeff=-0.0428;MQ=51.36;MQ0=24;MQRankSum=2.108;QD=1.28;ReadPosRankSum=4.956;VQSLOD=-0.5834;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:35.46:0,35,406	0/1:10,0:10:10.08:10,0,57	0/0:11,0:6:17.87:0,18,177	0/0:17,0:8:12.03:0,12,127	0/1:26,0:26:31.20:31,0,218	0/1:27,0:22:9.60:10,0,36	0/1:10,0:8:21.42:21,0,27	0/0:32,0:29:49.04:0,49,313	0/0:12,0:12:0.36:0,0,196	0/0:23,0:21:4.24:0,4,132	0/0:21,0:18:2.86:0,3,56	0/0:15,0:14:39.54:0,40,448	0/0:13,0:13:5.52:0,6,142	1/1:6,0:6:2.96:19,3,0	0/0:26,0:26:59.83:0,60,561	0/0:14,0:14:27.85:0,28,232	0/1:20,0:20:71.90:78,0,72	0/1:22,1:21:7.63:31,0,8	0/1:29,1:27:69.30:69,0,216	0/1:25,0:22:49.32:49,0,51	1/1:4,0:3:3.74:12,4,0	0/0:10,0:10:6.16:0,6,95	0/0:12,0:12:10.39:0,10,276	0/0:11,0:11:20.70:0,21,195	1/1:40,0:34:3.18:54,3,0	0/0:30,0:30:21.49:0,21,910	0/1:21,0:20:11.25:18,0,11	0/1:10,3:12:74.09:74,0,337
chr10	38062862	.	C	CTT	7107.02	PASS	AB=0.913;AC=30;AF=0.536;AN=56;BaseQRankSum=-6.521;DP=514;FS=4.917;HRun=1;HaplotypeScore=124.6773;InbreedingCoeff=0.4876;MQ=51.38;MQ0=24;MQRankSum=3.486;QD=19.05;ReadPosRankSum=0.222;VQSLOD=2.4138;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:35.50:0,35,411	1/1:2,8:10:23.98:346,24,0	0/0:8,0:5:11.79:0,12,122	0/0:13,0:6:2.31:0,2,79	0/1:25,0:25:35.25:35,0,198	1/1:7,19:21:35.70:560,36,0	1/1:4,6:8:14.26:205,14,0	1/1:29,3:29:48.66:592,49,0	0/1:12,0:12:1.60:2,0,196	1/1:3,21:22:63.11:989,63,0	1/1:3,17:18:47.89:570,48,0	0/0:15,0:14:39.53:0,40,447	0/0:13,0:13:5.53:0,6,142	1/1:6,0:6:2.96:19,3,0	0/0:25,0:25:53.63:0,54,499	0/0:12,0:12:21.85:0,22,182	0/1:20,0:20:73.08:80,0,73	1/1:5,2:21:9.50:144,10,0	0/1:12,17:28:19.92:688,0,20	1/1:3,21:21:60.03:933,60,0	1/1:1,3:3:6.02:108,6,0	0/0:9,0:9:5.43:0,5,94	0/0:14,0:14:35.90:0,36,365	0/0:11,0:11:20.86:0,21,207	1/1:2,38:34:62.42:1078,62,0	0/1:25,5:30:99:120,0,881	1/1:3,17:19:33.11:536,33,0	0/1:15,0:14:99:102,0,329
chr10	38062868	.	CTT	C	2807.29	PASS	AB=0.882;AC=23;AF=0.411;AN=56;BaseQRankSum=5.984;DP=510;FS=14.515;HRun=3;HaplotypeScore=135.1661;InbreedingCoeff=0.4118;MQ=51.13;MQ0=24;MQRankSum=-1.136;QD=10.84;ReadPosRankSum=-0.321;VQSLOD=-0.5502;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:14,5:19:45.57:46,0,157	0/0:10,0:10:16.44:0,16,229	0/0:6,0:3:6.02:0,6,69	0/0:7,0:4:1.79:0,2,33	1/1:8,17:25:50.46:594,50,0	0/0:23,0:18:4.39:0,4,334	0/0:11,0:9:5.95:0,6,155	0/1:38,0:35:53.34:53,0,350	1/1:1,11:13:33.05:381,33,0	0/0:24,0:22:43.35:0,43,581	0/0:21,0:18:22.31:0,22,398	0/1:12,4:15:62.34:107,0,62	1/1:4,9:13:27.07:323,27,0	1/1:7,0:7:6:59,6,0	1/1:8,9:23:53.68:616,54,0	1/1:2,6:10:17.99:216,18,0	1/1:18,2:20:36.39:289,36,0	0/0:27,0:25:22.71:0,23,193	0/0:31,0:28:11.76:0,12,422	0/1:23,0:20:0.39:0,0,485	0/0:5,0:4:9.02:0,9,109	1/1:2,6:9:14.96:158,15,0	0/1:10,4:15:60.66:83,0,61	0/1:8,2:10:37.38:59,0,37	0/0:39,0:33:39.66:0,40,705	0/0:31,0:31:87.85:0,88,1245	0/1:18,0:17:16.24:16,0,231	0/0:15,0:14:39.09:0,39,525
chr10	38062872	.	CTTTCTT	C	3078.14	PASS	AB=0.870;AC=20;AF=0.357;AN=56;BaseQRankSum=4.360;DP=509;FS=41.076;HRun=0;HaplotypeScore=167.0263;InbreedingCoeff=0.5229;MQ=49.76;MQ0=24;MQRankSum=0.093;QD=16.29;ReadPosRankSum=0.524;VQSLOD=1.5948;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:14,5:19:99:117,0,167	0/0:10,0:10:24.08:0,24,731	0/1:6,0:4:2.79:3,0,56	0/0:4,0:2:4.83:0,5,40	1/1:24,1:25:45.78:488,46,0	0/0:22,0:17:40.69:0,41,1166	0/0:11,0:9:21.07:0,21,606	0/0:39,0:36:93.63:0,94,1886	1/1:13,0:14:32.67:398,33,0	0/0:25,0:23:69.24:0,69,2121	0/0:22,0:19:57.20:0,57,1499	0/1:12,4:15:46.27:333,0,46	1/1:13,0:13:25.46:276,25,0	1/1:9,0:9:11.94:114,12,0	1/1:21,0:21:51.68:669,52,0	1/1:9,0:9:15.40:118,15,0	0/1:19,0:19:93.24:93,0,214	0/0:27,0:25:24:0,24,617	0/0:31,0:28:84.06:0,84,1915	0/0:23,0:20:60.17:0,60,1816	0/0:5,0:4:9.03:0,9,297	1/1:12,0:12:20.89:197,21,0	0/1:13,4:17:23.90:325,0,24	0/1:7,2:9:44.40:147,0,44	0/0:37,0:31:66.14:0,66,2152	0/0:30,0:30:87.30:0,87,2341	0/0:19,0:18:38.91:0,39,1005	0/0:15,0:14:39.13:0,39,1121
chr10	38067156	.	C	CA	2180.08	PASS	AB=0.762;AC=13;AF=0.232;AN=56;BaseQRankSum=16.208;DP=781;FS=0.334;HRun=0;HaplotypeScore=140.5720;InbreedingCoeff=-0.1572;MQ=71.26;MQ0=3;MQRankSum=-1.097;QD=5.66;ReadPosRankSum=4.100;VQSLOD=3.4930;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:39,4:45:30.72:31,0,487	0/0:14,0:14:27.55:0,28,361	0/0:34,0:27:78.24:0,78,1070	0/0:36,0:26:68.91:0,69,915	0/1:26,6:32:52.97:53,0,312	0/0:16,0:16:45.13:0,45,611	0/0:30,0:30:87.29:0,87,1215	0/0:32,0:32:93.28:0,93,1241	0/1:26,11:37:99:218,0,296	0/0:25,0:25:75.25:0,75,1048	0/0:20,0:20:60.20:0,60,837	0/1:13,8:21:99:128,0,139	0/1:22,18:42:99:425,0,181	0/1:18,13:32:99:275,0,140	0/1:18,14:32:99:308,0,147	0/1:19,14:34:99:352,0,131	0/1:26,6:33:91.13:91,0,334	0/0:25,0:25:72.22:0,72,988	0/0:17,0:17:51.11:0,51,657	0/0:21,0:21:58.72:0,59,835	0/0:25,0:25:75.23:0,75,1029	0/1:12,9:21:96.08:175,0,96	1/1:13,7:20:3.06:118,3,0	0/1:23,11:34:99:161,0,223	0/0:28,0:28:24.07:0,24,324	0/0:31,0:31:66.84:0,67,931	0/0:25,0:25:75.25:0,75,1045	0/0:17,0:17:15.05:0,15,211
chr10	38067157	.	T	TCCA	6021.30	PASS	AB=0.762;AC=13;AF=0.232;AN=56;BaseQRankSum=14.630;DP=784;FS=1.389;HRun=0;HaplotypeScore=159.0122;InbreedingCoeff=-0.1152;MQ=71.81;MQ0=3;MQRankSum=-1.382;QD=15.60;ReadPosRankSum=2.203;VQSLOD=4.6814;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:41,0:44:99:115,0,462	0/0:14,0:14:32.21:0,32,445	0/0:34,0:27:78.23:0,78,1378	0/0:35,0:27:74.54:0,75,1246	0/1:26,6:32:99:222,0,324	0/0:16,0:16:42.14:0,42,782	0/0:30,0:30:90.29:0,90,1627	0/0:33,0:33:96.30:0,96,1648	0/1:28,11:39:99:677,0,228	0/0:25,0:25:75.26:0,75,1393	0/0:20,0:20:60.19:0,60,1076	0/1:14,8:22:99:369,0,148	0/1:24,18:42:99:1005,0,180	0/1:18,13:31:99:686,0,139	0/1:18,14:31:99:666,0,171	0/1:19,14:33:99:758,0,129	0/1:29,6:35:99:311,0,315	0/0:25,0:25:72.23:0,72,1294	0/0:17,0:17:51.12:0,51,857	0/0:21,0:21:59.32:0,59,1115	0/0:26,0:26:75.22:0,75,1325	0/1:12,9:21:79.92:431,0,80	1/1:13,7:20:20.45:284,20,0	0/1:23,11:34:99:497,0,252	0/0:29,0:29:45.78:0,46,473	0/0:31,0:31:65.14:0,65,1222	0/0:25,0:25:75.26:0,75,1386	0/0:17,0:17:3.92:0,4,260
chr10	38071258	.	AGTGT	A	1422.81	PASS	AB=0.899;AC=33;AF=0.717;AN=46;BaseQRankSum=3.926;DP=556;FS=20.390;HRun=0;HaplotypeScore=86.5363;InbreedingCoeff=0.3760;MQ=70.00;MQ0=7;MQRankSum=-0.860;QD=4.47;ReadPosRankSum=-1.526;VQSLOD=-0.2426;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:0:0,0,0	1/1:3,1:5:6.01:74,6,0	./.	./.	1/1:11,1:12:6.01:74,6,0	1/1:12,1:15:9.02:102,9,0	1/1:20,3:23:2.86:46,3,0	./.	1/1:9,2:11:2.06:45,2,0	0/1:17,1:18:15.60:60,0,16	1/1:10,3:13:5.95:64,6,0	0/0:18,0:18:9.01:0,9,164	1/1:11,8:19:5.59:92,6,0	0/1:14,7:21:10.97:40,0,11	1/1:19,3:22:9.03:139,9,0	1/1:17,1:20:12.02:146,12,0	./.	1/1:11,11:21:18.06:277,18,0	./.	0/0:7,0:10:2.74:0,3,12	1/1:46,0:45:8.77:101,9,0	1/1:16,0:16:3.01:46,3,0	0/0:15,0:14:4.80:0,5,72	0/0:29,0:30:44.84:0,45,730	1/1:9,3:12:3.01:46,3,0	0/1:11,0:11:0:0,0,0	1/1:20,0:19:9.01:95,9,0	1/1:6,0:11:12.01:112,12,0
chr10	38072295	.	TCTCCTCCTC	T	2964.34	PASS	AB=0.851;AC=23;AF=0.460;AN=50;BaseQRankSum=4.715;DP=420;FS=29.676;HRun=0;HaplotypeScore=119.6833;InbreedingCoeff=0.5207;MQ=48.09;MQ0=17;MQRankSum=-4.358;QD=11.86;ReadPosRankSum=1.890;VQSLOD=0.8596;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:17,28:44:6.99:979,7,0	0/0:3,0:3:3.01:0,3,65	0/1:21,0:3:8.17:8,0,92	./.	1/1:4,3:7:6:82,6,0	0/0:11,0:9:11.94:0,12,110	0/0:17,0:16:12.03:0,12,265	0/0:11,0:10:15.05:0,15,228	1/1:4,10:14:8.26:171,8,0	0/0:13,0:12:6.01:0,6,104	0/0:4,0:4:12.02:0,12,161	1/1:6,13:17:3.01:84,3,0	1/1:8,9:17:16.47:422,16,0	1/1:6,10:16:6.02:168,6,0	1/1:11,12:22:15.02:327,15,0	1/1:5,11:16:9.92:231,10,0	1/1:6,10:15:12:246,12,0	0/1:10,0:8:18.74:19,0,181	0/0:9,0:5:6:0,6,67	0/0:10,0:10:15.05:0,15,303	0/0:34,0:34:11.26:0,11,542	./.	1/1:6,7:13:0.16:142,0,0	0/1:13,18:29:1.22:256,0,1	0/0:3,0:2:3.01:0,3,31	0/0:13,0:20:5.03:0,5,163	0/0:7,0:7:6:0,6,97	./.
chr10	38073996	.	AC	A	8934.87	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=9.428;DP=628;FS=27.980;HRun=7;HaplotypeScore=63.7621;InbreedingCoeff=0.9730;MQ=56.78;MQ0=11;MQRankSum=-1.214;QD=24.75;ReadPosRankSum=4.386;VQSLOD=3.1809;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,40:35:96.15:966,96,0	0/0:10,0:8:24.08:0,24,301	0/0:27,0:18:45.12:0,45,542	0/0:13,1:13:3.60:0,4,285	1/1:3,21:22:63.14:642,63,0	0/0:15,0:14:42.13:0,42,528	0/0:35,0:28:75.17:0,75,897	0/0:28,0:23:36.01:0,36,425	1/1:0,27:25:69.16:703,69,0	0/0:20,0:20:60.19:0,60,748	0/0:10,0:10:30.10:0,30,377	1/1:1,31:30:87.20:887,87,0	1/1:4,28:26:69.15:703,69,0	1/1:4,27:25:75.16:758,75,0	1/1:1,18:16:42.10:428,42,0	1/1:1,22:21:54.12:551,54,0	1/1:0,27:25:63.14:642,63,0	0/0:19,0:17:51.16:0,51,641	0/0:23,0:21:51.16:0,51,640	0/0:17,0:15:42.13:0,42,526	0/0:23,0:23:66.21:0,66,830	1/1:1,11:11:33.08:337,33,0	1/1:2,16:16:48.11:489,48,0	1/1:0,37:35:99:1040,102,0	0/0:8,0:7:21.03:0,21,247	1/1:3,29:26:34.42:666,34,0	0/0:18,0:11:33.11:0,33,415	1/1:0,4:4:12.03:122,12,0
chr10	38075133	.	C	CGTGTGT	14764.46	PASS	AB=0.802;AC=49;AF=0.907;AN=54;BaseQRankSum=-1.033;DP=760;FS=0.000;HRun=0;HaplotypeScore=224.7671;InbreedingCoeff=0.2996;MQ=58.29;MQ0=5;MQRankSum=-1.195;QD=21.12;ReadPosRankSum=0.255;VQSLOD=3.8091;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:30:23.08:585,23,0	1/1:8,5:16:21.88:665,22,0	0/0:35,0:23:3.01:0,3,46	./.	1/1:14,0:19:11.81:313,12,0	1/1:9,12:27:20.11:506,20,0	0/1:22,17:45:11.42:1312,0,11	1/1:38,0:37:33.07:614,33,0	1/1:22,0:28:16.90:468,17,0	1/1:15,8:25:39.13:945,39,0	1/1:7,13:25:32.85:955,33,0	1/1:17,0:20:12.01:279,12,0	1/1:17,0:25:30.08:737,30,0	1/1:24,1:35:33.03:881,33,0	1/1:23,0:29:17.99:410,18,0	1/1:27,0:38:30.10:764,30,0	1/1:25,0:34:23.77:480,24,0	0/1:21,4:32:45.71:397,0,46	1/1:13,4:20:36.10:859,36,0	1/1:5,4:11:8.86:293,9,0	1/1:34,0:56:18.06:290,18,0	1/1:15,0:21:23.91:548,24,0	0/1:14,0:12:0:0,0,0	1/1:25,0:31:8.29:165,8,0	1/1:7,5:16:18.06:467,18,0	1/1:18,1:26:39.12:908,39,0	1/1:8,8:24:30.10:855,30,0	1/1:5,0:5:3.01:68,3,0
chr10	38075512	.	CG	C	5548.82	PASS	AB=0.851;AC=43;AF=0.768;AN=56;BaseQRankSum=-1.626;DP=443;FS=20.903;HRun=10;HaplotypeScore=71.3822;InbreedingCoeff=0.6809;MQ=66.97;MQ0=0;MQRankSum=-0.170;QD=14.72;ReadPosRankSum=4.875;VQSLOD=3.4564;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,21:27:32.58:444,33,0	1/1:2,6:8:15:130,15,0	0/0:12,0:11:19.45:0,19,181	0/1:10,0:9:7.74:8,0,83	0/1:6,8:14:36.36:164,0,36	1/1:7,20:27:8.63:531,9,0	1/1:14,15:29:47.91:415,48,0	1/1:6,13:19:27.96:279,28,0	1/1:11,5:16:16.64:145,17,0	1/1:4,14:18:38.98:338,39,0	1/1:6,10:17:31.97:258,32,0	0/0:18,0:18:19.61:0,20,393	1/1:5,7:12:20.98:182,21,0	1/1:12,10:22:29.92:260,30,0	1/1:3,10:13:23.97:208,24,0	1/1:8,11:19:10.33:232,10,0	1/1:8,12:20:41.92:361,42,0	1/1:7,7:14:0.41:154,0,0	1/1:2,10:12:32.99:285,33,0	1/1:3,5:9:17.01:136,17,0	1/1:6,13:19:35.97:312,36,0	1/1:2,14:16:35.98:312,36,0	0/0:8,0:8:12.03:0,12,132	0/0:18,1:19:19.19:0,19,383	1/1:3,9:12:26.99:234,27,0	0/1:8,1:11:2.40:2,0,128	1/1:5,8:13:17.68:155,18,0	0/0:3,0:9:20.22:0,20,121
chr10	38077253	.	T	TGGGTAGCATTCCCCAGTGCCA	71719.79	PASS	AB=0.950;AC=29;AF=0.518;AN=56;BaseQRankSum=4.526;DP=673;FS=3.891;HRun=0;HaplotypeScore=355.0669;InbreedingCoeff=0.9234;MQ=75.96;MQ0=0;MQRankSum=-20.559;QD=184.37;ReadPosRankSum=3.213;VQSLOD=4.2106;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:31,8:40:96.26:6874,96,0	0/0:7,0:7:21.07:0,21,972	0/0:22,0:22:48.13:0,48,1635	0/0:22,0:22:48.95:0,49,1374	1/1:22,11:33:75.23:4712,75,0	0/0:22,0:22:60.19:0,60,3042	0/0:25,0:25:69.19:0,69,3549	0/0:34,0:33:96.29:0,96,3892	1/1:19,7:26:72.18:5901,72,0	0/0:24,0:24:69.24:0,69,3442	0/0:14,0:14:39.13:0,39,2044	1/1:17,10:30:78.14:5880,78,0	1/1:14,7:22:60.21:5335,60,0	1/1:24,10:36:99:8058,102,0	1/1:29,10:43:99:8836,111,0	1/1:14,9:24:69.24:6279,69,0	1/1:19,4:25:66.70:5369,67,0	0/1:18,1:19:99:245,0,2742	0/0:25,0:25:72.24:0,72,3498	0/0:21,0:21:60.20:0,60,3194	0/0:26,0:26:72.25:0,72,3700	1/1:19,4:27:60.14:4117,60,0	1/1:13,4:18:39.13:2641,39,0	1/1:19,0:19:27.87:1454,28,0	0/0:18,0:18:54.18:0,54,2767	1/1:15,5:21:57.20:4964,57,0	0/0:24,0:24:69.24:0,69,3863	1/1:2,2:6:11.81:1053,12,0
chr10	38079990	.	GT	G	7086.82	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=12.528;DP=598;FS=7.633;HRun=8;HaplotypeScore=60.5538;InbreedingCoeff=0.9708;MQ=63.28;MQ0=6;MQRankSum=1.124;QD=23.16;ReadPosRankSum=4.274;VQSLOD=5.2852;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,35:38:99:985,102,0	0/0:11,0:11:24.07:0,24,290	0/0:15,0:6:5.91:0,6,52	0/0:21,0:12:10.22:0,10,108	1/1:2,34:36:90.08:857,90,0	0/0:19,0:19:51.08:0,51,586	0/0:24,0:26:69.06:0,69,799	0/0:22,0:21:54.14:0,54,627	1/1:0,15:15:39.06:377,39,0	0/0:18,0:18:51.13:0,51,582	0/0:22,0:21:63.17:0,63,731	1/1:3,14:17:42.06:406,42,0	1/1:1,18:19:51.08:491,51,0	1/1:2,18:20:42.07:406,42,0	1/1:0,22:22:57.09:550,57,0	1/1:2,15:17:36.06:348,36,0	1/1:1,25:26:66.11:637,66,0	0/0:29,0:29:75.23:0,75,902	0/0:14,0:14:30.08:0,30,351	0/0:28,0:29:81.11:0,81,957	0/0:25,0:25:66.17:0,66,770	1/1:4,15:18:36.05:348,36,0	1/1:3,24:27:66:637,66,0	1/1:1,15:16:36.06:348,36,0	0/0:19,0:19:54.17:0,54,652	1/1:6,24:29:35.82:611,36,0	0/0:21,0:22:66.05:0,66,751	1/1:0,4:4:9.01:87,9,0
chr10	38082695	.	AT	A	5685.83	PASS	AB=0.861;AC=26;AF=0.464;AN=56;BaseQRankSum=7.400;DP=673;FS=2.191;HRun=11;HaplotypeScore=73.2368;InbreedingCoeff=0.7987;MQ=75.91;MQ0=0;MQRankSum=-2.226;QD=17.28;ReadPosRankSum=3.744;VQSLOD=5.8441;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,40:48:83.89:885,84,0	0/0:11,2:13:2.42:0,2,231	0/1:18,3:22:45.68:46,0,210	0/1:6,1:7:13.08:13,0,47	1/1:2,22:25:64.93:523,65,0	0/0:23,0:25:72.04:0,72,743	0/0:23,2:25:4.85:0,5,463	0/0:26,3:29:10.92:0,11,520	1/1:1,18:20:52.97:425,53,0	0/0:34,0:35:89.02:0,89,921	0/0:19,0:19:45.10:0,45,467	1/1:7,18:25:15.94:337,16,0	1/1:3,18:21:50.93:419,51,0	1/1:5,20:25:47.93:394,48,0	1/1:1,19:20:47.94:394,48,0	1/1:1,26:27:68.92:567,69,0	1/1:2,25:28:67.94:548,68,0	0/0:25,0:24:75.16:0,75,788	0/0:14,1:16:17.29:0,17,373	0/0:21,1:24:35.17:0,35,541	0/0:29,0:29:57.12:0,57,599	1/1:0,18:18:47.94:394,48,0	1/1:2,16:19:8.38:268,8,0	1/1:2,21:24:58.75:474,59,0	0/0:24,0:24:60.14:0,60,632	0/0:11,0:41:92.43:0,92,545	0/0:23,1:24:35.51:0,36,583	0/0:3,0:15:34.42:0,34,189
chr10	38088865	.	G	GT	3985.49	PASS	AB=0.724;AC=23;AF=0.411;AN=56;BaseQRankSum=-8.258;DP=517;FS=2.934;HRun=12;HaplotypeScore=47.7881;InbreedingCoeff=0.7210;MQ=53.47;MQ0=38;MQRankSum=-2.172;QD=14.76;ReadPosRankSum=-1.010;VQSLOD=3.8733;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:13:25.79:0,26,175	1/1:3,5:6:15.02:146,15,0	0/0:12,0:7:2.87:0,3,19	0/1:8,0:6:12.18:26,0,12	0/0:24,0:22:50.55:0,51,362	0/1:4,16:20:1.77:299,0,2	1/1:6,10:13:29.88:277,30,0	1/1:4,20:21:35.20:494,35,0	0/0:16,1:17:3.60:0,4,190	1/1:7,19:22:14.40:384,14,0	1/1:4,21:24:11.12:259,11,0	0/0:11,0:10:10.27:0,10,172	0/0:17,1:18:40.64:0,41,280	0/0:13,1:10:23.86:0,24,175	0/0:20,0:20:38.44:0,38,268	0/0:15,0:14:35.40:0,35,241	0/0:13,0:13:23.83:0,24,175	1/1:7,13:17:24.04:234,24,0	1/1:7,7:14:2.07:166,2,0	1/1:6,14:17:33.02:313,33,0	0/1:3,4:6:31.80:46,0,32	0/0:26,0:24:53.32:0,53,367	0/0:15,0:16:36.80:0,37,247	0/0:15,0:14:32.81:0,33,241	1/1:6,32:35:49.07:612,49,0	0/0:3,0:16:28.85:0,29,85	1/1:9,30:39:61.88:729,62,0	0/0:1,0:13:22.41:0,22,66
chr10	38091412	.	AGAGG	A	626.74	PASS	AB=0.898;AC=29;AF=0.630;AN=46;BaseQRankSum=0.743;DP=251;FS=41.592;HRun=0;HaplotypeScore=52.1088;InbreedingCoeff=0.1984;MQ=25.24;MQ0=41;MQRankSum=-0.669;QD=6.33;ReadPosRankSum=-2.036;VQSLOD=-0.1130;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:6,0:2:3:25,3,0	1/1:4,0:2:0.76:2,1,0	0/0:59,0:7:17.58:0,18,241	0/0:57,0:8:11.75:0,12,161	./.	1/1:11,0:8:0.86:2,1,0	0/0:7,0:5:0.47:0,0,2	0/1:6,2:6:89.71:108,0,90	1/1:4,1:4:6.04:76,6,0	1/1:6,1:5:11.21:114,11,0	./.	1/1:6,0:6:0.50:43,0,0	1/1:3,0:3:4.99:24,5,0	1/1:3,0:3:5.98:64,6,0	0/0:4,0:3:2.88:0,3,15	1/1:1,0:1:2.22:7,2,0	0/0:4,0:2:2.37:0,2,8	0/1:4,0:4:8:27,0,8	0/1:10,0:6:27.25:27,0,97	./.	0/1:4,0:3:0:0,0,0	0/0:7,0:6:0.47:0,0,1	./.	./.	0/1:10,2:10:23.94:73,0,24	1/1:5,1:5:5.77:68,6,0	1/1:3,0:3:6:76,6,0	1/1:5,0:2:2.92:17,3,0
chr10	38091424	.	AG	A	197.73	PASS	AB=0.822;AC=10;AF=0.227;AN=44;BaseQRankSum=-1.425;DP=278;FS=7.079;HRun=1;HaplotypeScore=62.7146;InbreedingCoeff=0.0397;MQ=24.77;MQ0=35;MQRankSum=1.977;QD=3.47;ReadPosRankSum=0.127;VQSLOD=-0.1723;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:3,1:2:3.01:0,3,30	./.	0/0:72,0:7:14.07:0,14,206	0/0:76,0:8:14.87:0,15,204	./.	0/1:3,0:2:0:0,0,0	0/0:8,0:6:3.01:0,3,46	0/1:14,3:16:78.92:79,0,346	0/0:5,0:5:9.59:0,10,71	0/0:6,0:5:14.63:0,15,157	./.	0/0:5,0:5:2.98:0,3,23	0/0:3,0:3:0.89:0,1,2	0/0:4,0:4:6.01:0,6,70	0/1:2,2:3:29.70:36,0,30	0/0:3,0:3:6.02:0,6,72	1/1:3,0:2:2.80:13,3,0	0/1:4,1:5:36.82:37,0,65	0/1:6,3:5:35.74:111,0,36	0/0:6,0:6:0.28:0,0,1	1/1:6,0:4:2.04:6,2,0	./.	./.	./.	0/1:8,2:9:26.88:27,0,113	0/0:5,0:3:5.67:0,6,35	0/0:5,0:5:4.74:0,5,62	0/0:6,0:3:0:0,0,0
chr10	38091448	.	AAGGAGGAGGAGGAGGAGGAGGAAGAGG	A	4340.23	PASS	AB=0.866;AC=22;AF=0.500;AN=44;BaseQRankSum=-1.804;DP=206;FS=3.945;HRun=0;HaplotypeScore=94.6046;InbreedingCoeff=0.3561;MQ=21.31;MQ0=30;MQRankSum=1.178;QD=51.67;ReadPosRankSum=2.030;VQSLOD=3.5276;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:4,0:3:63.53:64,0,155	./.	./.	./.	0/0:5,0:5:8.58:0,9,45	1/1:1,2:2:6.02:309,6,0	1/1:8,0:6:3.01:141,3,0	0/1:19,0:12:63.49:73,0,63	0/0:4,0:4:4:0,4,55	1/1:2,3:4:9.03:630,9,0	./.	1/1:2,0:2:3.01:117,3,0	0/0:2,0:2:1.67:0,2,24	0/0:4,0:4:6.47:0,6,72	0/0:1,0:1:3.01:0,3,60	0/0:3,0:3:7.56:0,8,58	./.	1/1:6,0:6:12.04:569,12,0	1/1:2,1:2:6.02:262,6,0	1/1:3,3:6:15.05:646,15,0	1/1:10,0:6:9.03:226,9,0	0/0:4,0:3:9:0,9,87	0/1:3,0:4:7.99:179,0,8	./.	0/1:4,2:6:82.12:535,0,82	0/0:8,0:5:12.04:0,12,514	1/1:5,2:5:12.04:589,12,0	0/0:8,0:8:8.19:0,8,105
chr10	38091456	.	GGAGGAGGAGGAGGAA	G	4699.07	PASS	AB=1.000;AC=39;AF=0.780;AN=50;BaseQRankSum=3.795;DP=212;FS=5.786;HRun=0;HaplotypeScore=81.0900;InbreedingCoeff=0.2276;MQ=22.97;MQ0=36;MQRankSum=0.768;QD=36.43;ReadPosRankSum=1.253;VQSLOD=3.2634;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:4,0:3:29.73:30,0,68	1/1:2,0:2:6.02:71,6,0	0/0:27,0:2:5.75:0,6,120	0/0:30,0:3:3.01:0,3,66	1/1:2,3:5:9.03:315,9,0	1/1:6,0:5:15.05:237,15,0	1/1:9,0:6:6.02:80,6,0	0/0:19,0:11:17.39:0,17,113	1/1:2,4:5:9.03:354,9,0	1/1:7,0:6:15.05:395,15,0	./.	1/1:2,0:2:3.01:79,3,0	1/1:2,2:4:9.03:299,9,0	1/1:3,2:5:11.84:210,12,0	1/1:0,1:1:3.01:32,3,0	1/1:1,2:3:8.96:253,9,0	./.	1/1:5,0:5:12.04:452,12,0	1/1:4,0:3:6.02:146,6,0	1/1:7,0:7:18.06:342,18,0	1/1:13,0:6:8.90:67,9,0	1/1:3,2:4:11.97:320,12,0	0/1:7,0:5:4.98:183,0,5	./.	0/1:7,0:7:17.04:244,0,17	0/1:10,0:6:54.10:112,0,54	1/1:9,0:7:18.06:390,18,0	0/1:8,0:8:1.67:88,0,2
chr10	38091472	.	G	GA	1231.84	PASS	AB=0.917;AC=24;AF=0.444;AN=54;BaseQRankSum=2.870;DP=245;FS=0.000;HRun=2;HaplotypeScore=70.2987;InbreedingCoeff=0.4465;MQ=27.35;MQ0=39;MQRankSum=-0.487;QD=10.35;ReadPosRankSum=-0.622;VQSLOD=1.1924;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:2,1:3:23.15:51,0,23	1/1:2,0:2:6.02:73,6,0	0/0:31,0:3:8.94:0,9,95	0/0:30,0:4:9.03:0,9,117	0/0:6,0:5:11.89:0,12,95	1/1:8,0:7:21.01:220,21,0	1/1:8,0:5:0.81:26,1,0	0/1:15,0:7:4.17:4,0,101	0/0:6,0:5:7.73:0,8,34	1/1:7,1:7:3.69:114,4,0	0/1:6,0:4:0:0,0,0	0/1:2,1:3:11.76:25,0,12	0/0:5,0:5:11.65:0,12,101	0/0:7,0:6:8.96:0,9,89	0/0:2,0:2:3.01:0,3,36	0/0:5,0:5:12.58:0,13,96	0/0:6,0:4:6.02:0,6,70	1/1:8,0:7:14.19:85,14,0	0/1:6,0:4:7.35:83,0,7	1/1:6,0:6:17.38:155,17,0	1/1:14,0:6:5.11:19,5,0	0/0:6,0:5:14.88:0,15,126	1/1:6,4:8:15.02:166,15,0	./.	0/1:11,0:11:9.57:222,0,10	0/0:14,0:11:22.19:0,22,205	1/1:11,0:9:15.37:167,15,0	0/0:5,0:5:8.85:0,9,77
chr10	38091473	.	AGG	A	1173.32	PASS	AB=0.854;AC=23;AF=0.411;AN=56;BaseQRankSum=5.664;DP=250;FS=1.825;HRun=2;HaplotypeScore=72.3767;InbreedingCoeff=0.4093;MQ=27.36;MQ0=41;MQRankSum=-0.138;QD=10.29;ReadPosRankSum=2.898;VQSLOD=0.9508;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:4:11.20:0,11,87	1/1:0,2:2:6.01:56,6,0	0/0:34,0:3:8.99:0,9,142	0/0:32,0:4:9.03:0,9,183	0/0:6,0:5:6.28:0,6,44	1/1:3,5:7:20.93:193,21,0	1/1:7,1:5:4.04:50,4,0	0/1:12,3:7:31.01:31,0,122	0/1:6,0:5:14.27:14,0,18	1/1:6,2:7:20.74:201,21,0	1/1:6,0:4:2.92:17,3,0	0/0:3,0:3:5.21:0,5,22	0/0:5,0:5:0.22:0,0,65	0/0:7,0:6:6.02:0,6,72	0/0:2,0:2:5.95:0,6,54	0/1:5,0:5:2.22:2,0,64	0/0:6,0:4:6.02:0,6,71	1/1:7,1:7:15.71:110,16,0	0/1:4,2:4:6.33:87,0,6	1/1:5,1:6:17.36:149,17,0	1/1:14,0:6:5.22:19,5,0	0/0:6,0:5:9.50:0,9,105	0/0:10,0:8:4.46:0,4,47	0/0:2,0:1:0:0,0,0	0/1:6,5:11:7.78:206,0,8	0/0:14,0:11:15.78:0,16,267	1/1:6,5:9:21.75:213,22,0	0/0:5,0:5:3.62:0,4,57
chr10	38091474	.	G	GA	208.21	PASS	AB=0.873;AC=9;AF=0.167;AN=54;BaseQRankSum=2.068;DP=246;FS=7.767;HRun=1;HaplotypeScore=72.5062;InbreedingCoeff=0.0409;MQ=27.54;MQ0=42;MQRankSum=-2.333;QD=3.41;ReadPosRankSum=2.132;VQSLOD=-0.0223;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:4:10.74:0,11,74	0/1:2,0:2:1.18:1,0,4	0/0:35,0:3:6.02:0,6,84	0/0:34,0:4:9.03:0,9,126	0/0:6,0:5:11.97:0,12,110	0/0:8,0:7:10.16:0,10,44	0/1:6,2:5:15.06:16,0,15	0/0:10,0:3:5.23:0,5,49	0/0:6,0:5:11.03:0,11,78	0/0:8,0:7:13.07:0,13,45	0/0:6,0:4:2.99:0,3,23	0/1:3,0:3:2.01:8,0,2	0/0:6,0:6:11.74:0,12,116	0/0:7,0:6:8.99:0,9,103	0/0:2,0:2:6.01:0,6,67	0/0:5,0:5:12.60:0,13,115	0/0:6,0:4:6.02:0,6,83	0/1:5,3:7:11.46:109,0,11	0/0:5,0:3:1.94:0,2,7	0/1:4,2:6:23.99:28,0,24	1/1:10,2:4:4.73:84,5,0	0/0:6,0:5:14.97:0,15,163	0/0:10,0:8:0.69:0,1,52	./.	0/1:10,1:11:59.92:68,0,60	0/0:14,0:11:29.81:0,30,344	0/1:10,1:9:18.50:18,0,43	0/0:5,0:5:8.87:0,9,77
chr10	38091527	.	GA	G	107.81	PASS	AB=0.772;AC=5;AF=0.089;AN=56;BaseQRankSum=-0.322;DP=586;FS=11.710;HRun=4;HaplotypeScore=148.6455;InbreedingCoeff=0.1843;MQ=42.16;MQ0=16;MQRankSum=-2.654;QD=2.57;ReadPosRankSum=-1.282;VQSLOD=-0.6686;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:17.30:0,17,171	0/0:10,0:10:30.10:0,30,434	0/0:106,1:24:59.23:0,59,718	0/0:114,0:18:33.77:0,34,327	0/0:14,0:14:27.05:0,27,357	0/0:22,0:22:66.18:0,66,942	0/0:15,0:15:30.53:0,31,417	0/0:38,0:37:99:0,103,1371	0/1:4,4:8:99:108,0,114	0/0:21,0:21:63.21:0,63,932	0/0:14,0:14:27.09:0,27,404	0/0:5,0:5:6.02:0,6,87	0/0:8,0:8:14.84:0,15,192	0/0:11,0:11:15.05:0,15,220	0/0:8,0:8:17.64:0,18,198	0/0:10,0:10:21.04:0,21,278	0/0:13,0:13:20.86:0,21,255	0/0:14,0:13:36.12:0,36,533	0/0:10,0:9:24.08:0,24,359	0/0:15,0:15:42.06:0,42,579	0/0:14,0:14:36.12:0,36,537	0/0:15,0:15:20.54:0,21,232	0/0:12,0:12:20.63:0,21,200	1/1:9,0:9:2.50:24,2,0	0/0:21,0:21:57.19:0,57,853	0/1:14,5:19:62.85:63,0,519	0/0:20,0:20:54.15:0,54,776	0/1:5,1:6:23.81:24,0,123
chr10	38091532	.	G	GAGAAGAGAGA	7331.46	PASS	AB=0.997;AC=38;AF=0.679;AN=56;BaseQRankSum=-6.627;DP=618;FS=92.185;HRun=0;HaplotypeScore=189.8065;InbreedingCoeff=0.0532;MQ=47.71;MQ0=16;MQRankSum=-6.093;QD=13.05;ReadPosRankSum=1.185;VQSLOD=-0.1585;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:4,9:15:12.01:408,12,0	0/1:10,0:10:27.26:27,0,258	0/1:98,0:24:7.74:8,0,231	0/1:111,0:24:16.14:16,0,210	1/1:5,11:19:12:406,12,0	0/1:23,0:23:11:11,0,584	0/1:15,0:15:61.67:62,0,188	0/1:38,0:38:78.22:323,0,78	1/1:8,0:8:15.05:590,15,0	0/1:20,0:20:20.77:21,0,396	0/0:16,0:16:4.60:0,5,292	1/1:1,5:8:2.67:150,3,0	1/1:5,4:9:3.01:151,3,0	1/1:3,10:14:9.03:386,9,0	1/1:1,7:10:15.05:753,15,0	1/1:5,6:16:9.03:452,9,0	1/1:6,9:19:18.03:658,18,0	0/0:16,0:15:5.04:0,5,399	0/0:9,0:8:12.04:0,12,153	0/0:15,0:15:30.10:0,30,388	0/1:15,0:14:66:66,0,231	1/1:4,9:14:12.04:602,12,0	1/1:5,8:16:15.01:546,15,0	1/1:2,8:12:3.48:92,3,0	0/1:23,0:23:55.02:55,0,453	1/1:15,4:19:39.11:1352,39,0	0/1:21,0:21:33.95:34,0,446	1/1:6,0:6:6.02:162,6,0
chr10	38091539	.	GAGA	G	2844.58	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-1.913;DP=634;FS=9.059;HRun=0;HaplotypeScore=161.5841;InbreedingCoeff=0.9708;MQ=55.34;MQ0=13;MQRankSum=0.391;QD=11.85;ReadPosRankSum=3.371;VQSLOD=2.6966;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:18:18.87:0,19,231	1/1:11,1:12:30.82:206,31,0	0/0:85,0:22:33.25:0,33,402	0/0:104,0:30:51.43:0,51,661	0/0:20,0:20:24.05:0,24,411	1/1:24,1:25:57.77:306,58,0	1/1:18,0:17:27.03:237,27,0	1/1:38,3:41:74.95:610,75,0	0/0:10,0:10:24.07:0,24,390	1/1:20,0:20:46.48:280,46,0	1/1:19,0:19:33.47:139,33,0	0/0:9,0:9:9.03:0,9,161	0/0:9,0:9:11.97:0,12,142	0/0:13,0:13:15.02:0,15,232	0/0:10,0:10:15.05:0,15,221	0/0:15,0:15:18.02:0,18,270	0/0:21,0:21:27.02:0,27,370	1/1:17,0:16:31.51:222,32,0	1/1:7,2:8:17.50:155,18,0	1/1:13,0:13:28.36:144,28,0	1/1:19,0:18:38.45:233,38,0	0/0:17,0:17:24.04:0,24,363	0/0:14,0:14:15.05:0,15,259	0/0:15,0:15:11.99:0,12,171	1/1:23,0:23:56.25:327,56,0	0/0:22,0:21:54.84:0,55,960	1/1:24,0:24:39.59:213,40,0	0/0:8,0:8:18.06:0,18,321
chr10	38091542	.	AAGAAGAG	A	2144.53	PASS	AB=0.978;AC=11;AF=0.196;AN=56;BaseQRankSum=-6.885;DP=616;FS=2.093;HRun=0;HaplotypeScore=183.3981;InbreedingCoeff=-0.2653;MQ=57.62;MQ0=13;MQRankSum=-2.320;QD=9.13;ReadPosRankSum=-7.775;VQSLOD=0.0770;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:18:20.74:0,21,415	0/1:12,0:12:99:121,0,169	0/0:82,0:22:15.01:0,15,283	0/0:98,0:33:27.06:0,27,844	0/0:19,0:19:21.07:0,21,549	0/1:24,0:24:99:231,0,395	0/1:20,0:19:99:217,0,142	0/1:25,12:37:99:634,0,107	0/0:12,0:12:27.09:0,27,592	0/1:20,0:20:96.28:96,0,330	0/1:19,0:19:99:368,0,205	0/0:9,0:9:6.02:0,6,166	0/0:8,0:8:6.02:0,6,139	0/0:14,0:14:15.05:0,15,392	0/0:10,0:10:15.05:0,15,431	0/0:16,0:16:15.05:0,15,406	0/0:21,0:21:24.08:0,24,561	0/1:17,0:16:99:130,0,300	0/0:8,0:7:11.92:0,12,111	0/0:13,0:13:23.81:0,24,198	0/1:19,0:18:99:183,0,145	0/0:16,0:16:21.07:0,21,580	0/0:12,0:12:12.04:0,12,323	0/0:15,0:15:12.51:0,13,283	0/1:22,0:22:99:144,0,390	0/1:23,0:22:13:13,0,1142	0/1:22,0:22:99:155,0,321	0/0:8,0:8:12.04:0,12,327
chr10	38091544	.	GA	G	5802.81	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-1.640;DP=610;FS=4.701;HRun=2;HaplotypeScore=130.4261;InbreedingCoeff=0.9762;MQ=57.99;MQ0=12;MQRankSum=-0.030;QD=25.12;ReadPosRankSum=4.665;VQSLOD=4.6744;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:17,1:18:23.98:0,24,260	1/1:12,0:12:35.72:343,36,0	0/0:76,0:24:37.13:0,37,375	0/0:91,2:31:55.46:0,55,699	0/0:19,0:19:24.05:0,24,313	1/1:25,0:24:69.05:680,69,0	1/1:20,0:19:26.49:401,26,0	1/1:32,3:35:79.02:704,79,0	0/0:11,0:11:27.05:0,27,350	1/1:18,0:18:51.11:608,51,0	1/1:19,0:19:44.91:421,45,0	0/0:10,0:10:9.01:0,9,113	0/0:9,0:9:11.99:0,12,134	0/0:15,0:15:20.99:0,21,218	0/0:10,0:10:14.97:0,15,118	0/0:16,0:16:20.98:0,21,219	0/0:21,0:21:27.06:0,27,361	1/1:16,1:16:17.72:490,18,0	1/1:8,0:7:17.21:162,17,0	1/1:13,0:13:30.09:350,30,0	1/1:19,0:18:42.04:441,42,0	0/0:16,0:16:23.97:0,24,249	0/0:12,0:12:15.01:0,15,167	0/0:18,0:18:20.90:0,21,237	1/1:22,0:22:63.05:655,63,0	0/0:25,0:24:48.98:0,49,827	1/1:23,0:22:53.82:548,54,0	0/0:8,0:8:18.06:0,18,259
chr10	38091545	.	A	AG	6431.21	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-1.605;DP=607;FS=8.065;HRun=1;HaplotypeScore=128.7099;InbreedingCoeff=0.9758;MQ=58.17;MQ0=12;MQRankSum=-0.171;QD=27.72;ReadPosRankSum=3.994;VQSLOD=4.1837;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:23.65:0,24,214	1/1:9,4:13:35.80:378,36,0	0/0:74,0:24:23.49:0,23,336	0/0:91,0:31:22.12:0,22,634	0/0:18,0:18:23.72:0,24,261	1/1:17,7:23:69.14:747,69,0	1/1:16,4:19:28.76:439,29,0	1/1:22,13:35:80.81:770,81,0	0/0:11,0:11:26.99:0,27,299	1/1:16,4:20:54.14:684,54,0	1/1:12,7:19:45.04:469,45,0	0/0:11,0:11:8.67:0,9,98	0/0:9,0:9:11.84:0,12,119	0/0:16,0:16:20.73:0,21,181	0/0:10,0:10:14.20:0,14,71	0/0:16,0:16:20.59:0,21,188	0/0:21,0:21:26.75:0,27,322	1/1:15,2:16:36.67:552,37,0	1/1:7,1:7:18.60:175,19,0	1/1:12,0:12:33.09:403,33,0	1/1:13,6:18:42.10:484,42,0	0/0:16,0:16:23.36:0,23,203	0/0:12,0:12:14.68:0,15,119	0/0:18,0:18:23.95:0,24,267	1/1:15,8:23:64.96:724,65,0	0/0:24,1:24:26.26:0,26,677	1/1:16,6:21:54.02:605,54,0	0/0:8,0:8:18.04:0,18,227
chr10	38091548	.	AG	A	5212.02	PASS	AB=0.875;AC=23;AF=0.411;AN=56;BaseQRankSum=-1.392;DP=602;FS=4.554;HRun=1;HaplotypeScore=130.7572;InbreedingCoeff=0.7642;MQ=58.73;MQ0=11;MQRankSum=-0.396;QD=20.60;ReadPosRankSum=4.038;VQSLOD=5.2182;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:18,0:18:7.59:8,0,191	1/1:9,4:13:32.62:299,33,0	0/0:68,2:23:37.17:0,37,461	0/0:87,0:33:74.61:0,75,875	0/0:19,0:19:26.94:0,27,355	1/1:18,7:24:68.41:627,68,0	1/1:17,4:20:25.25:366,25,0	0/1:22,13:35:15.73:530,0,16	0/0:11,0:11:26.95:0,27,371	1/1:14,5:19:56.56:606,57,0	1/1:12,7:19:44.72:380,45,0	0/0:12,0:12:9.02:0,9,122	0/0:8,0:8:9.02:0,9,122	0/0:16,0:16:17.89:0,18,209	0/0:10,0:10:15:0,15,132	0/0:15,0:15:18.03:0,18,223	0/0:20,0:20:33.08:0,33,460	0/1:15,2:16:10.06:394,0,10	1/1:7,1:7:13.88:139,14,0	1/1:13,0:13:33.04:340,33,0	1/1:13,6:18:41.96:400,42,0	0/0:16,0:16:21.03:0,21,250	0/0:12,0:12:14.89:0,15,152	0/0:18,0:18:21.07:0,21,334	1/1:16,8:24:68.38:626,68,0	0/0:25,1:25:11.65:0,12,767	1/1:16,6:21:53.53:498,54,0	0/0:8,0:8:14.92:0,15,207
chr10	38091549	.	G	GA	7323.55	PASS	AB=0.981;AC=28;AF=0.500;AN=56;BaseQRankSum=2.332;DP=598;FS=5.077;HRun=1;HaplotypeScore=122.7391;InbreedingCoeff=0.6774;MQ=58.89;MQ0=10;MQRankSum=-3.128;QD=23.78;ReadPosRankSum=5.367;VQSLOD=4.9219;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:17,0:18:6.18:6,0,103	1/1:13,1:14:35.59:411,36,0	0/0:67,0:22:37.99:0,38,370	0/0:85,0:32:59.31:0,59,686	0/0:19,0:19:9.04:0,9,215	1/1:25,0:24:71.57:836,72,0	1/1:21,0:20:30.98:482,31,0	1/1:35,0:35:28.99:905,29,0	0/0:10,0:11:13.32:0,13,238	1/1:18,1:19:57.18:796,57,0	1/1:19,0:19:45.11:523,45,0	0/0:12,0:12:6.26:0,6,75	0/0:8,0:8:6.49:0,6,73	0/1:16,0:16:1.64:2,0,104	0/0:10,0:10:2.36:0,2,3	0/0:14,0:14:10.44:0,10,114	0/0:20,0:20:28.02:0,28,332	1/1:17,0:16:9.46:574,9,0	1/1:7,1:7:20.04:229,20,0	1/1:12,1:13:33.07:430,33,0	1/1:19,0:18:42.12:528,42,0	0/0:16,0:16:10.91:0,11,119	0/1:13,0:13:2.92:3,0,35	0/0:18,0:18:21.06:0,21,262	1/1:23,1:24:69.18:852,69,0	0/1:23,1:24:82.92:83,0,434	1/1:22,0:21:54.11:664,54,0	0/0:7,0:8:2.44:0,2,128
chr10	38094137	.	AT	A	7433.01	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=19.148;DP=711;FS=4.930;HRun=8;HaplotypeScore=102.9455;InbreedingCoeff=0.9973;MQ=73.39;MQ0=1;MQRankSum=-7.034;QD=24.53;ReadPosRankSum=-0.233;VQSLOD=4.6785;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,132,1567	1/1:0,17:17:45.07:434,45,0	0/0:20,0:20:29.32:0,29,396	0/0:21,0:19:38.83:0,39,523	0/0:24,0:24:69.17:0,69,799	1/1:1,23:24:65.75:591,66,0	1/1:5,22:27:68.90:650,69,0	1/1:5,44:49:99:1099,117,0	0/0:27,0:27:69.20:0,69,822	1/1:1,26:27:78.10:746,78,0	1/1:1,23:25:62.13:585,62,0	0/0:22,0:22:54.14:0,54,630	0/0:26,0:26:72.21:0,72,857	0/0:25,0:25:63.19:0,63,761	0/0:28,0:29:81.10:0,81,945	0/0:20,0:20:51.12:0,51,584	0/0:33,0:33:93.27:0,93,1112	1/1:6,21:27:69.07:653,69,0	1/1:8,12:20:42.06:405,42,0	1/1:2,20:22:60.08:574,60,0	1/1:3,16:19:54.06:514,54,0	0/0:30,0:30:87.26:0,87,1041	0/0:20,0:20:60.18:0,60,725	0/0:27,0:27:75.22:0,75,894	1/1:1,16:17:51.03:479,51,0	0/0:30,2:32:23.29:0,23,846	1/1:3,26:29:75:703,75,0	0/0:5,0:5:15.05:0,15,181
chr10	38094202	.	T	TG	10877.25	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=10.893;DP=657;FS=9.623;HRun=0;HaplotypeScore=134.7513;InbreedingCoeff=0.9956;MQ=66.40;MQ0=0;MQRankSum=-13.790;QD=41.20;ReadPosRankSum=-2.328;VQSLOD=2.5569;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,111,1530	1/1:0,17:17:51.17:812,51,0	0/0:20,0:20:60.20:0,60,824	0/0:25,0:25:69.18:0,69,942	0/0:17,0:17:51.15:0,51,681	1/1:1,20:21:57.19:906,57,0	1/1:3,22:25:63.21:978,63,0	1/1:3,25:28:75.18:1128,75,0	0/0:26,0:26:75.25:0,75,1048	1/1:1,24:25:72.25:1148,72,0	1/1:1,11:12:24:347,24,0	0/0:31,0:31:84.26:0,84,1156	0/0:25,0:25:69.23:0,69,964	0/0:32,0:32:96.29:0,96,1303	0/0:24,0:24:72.22:0,72,987	0/0:28,0:28:84.27:0,84,1161	0/0:31,0:31:90.26:0,90,1220	1/1:2,17:19:54.11:804,54,0	1/1:1,20:21:57.19:909,57,0	1/1:2,20:22:12.25:766,12,0	1/1:1,19:20:48.02:703,48,0	0/0:22,0:22:66.20:0,66,892	0/0:16,0:16:45.15:0,45,629	0/0:27,0:27:78.24:0,78,1072	1/1:1,20:21:60.11:875,60,0	0/0:20,0:20:57.15:0,57,774	1/1:3,30:33:99:1500,99,0	0/0:11,0:11:33.11:0,33,461
chr10	38094230	.	GGTGTGTGTGTGTGTGC	G	14642.42	PASS	AB=0.703;AC=26;AF=0.464;AN=56;BaseQRankSum=15.919;DP=650;FS=3.416;HRun=0;HaplotypeScore=320.5144;InbreedingCoeff=0.8176;MQ=62.76;MQ0=3;MQRankSum=-14.161;QD=55.46;ReadPosRankSum=1.936;VQSLOD=4.1435;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:39:99:0,102,7114	1/1:4,9:13:27.09:1201,27,0	0/0:26,0:18:18.05:0,18,800	0/0:22,0:21:34.54:0,35,1856	0/0:21,0:21:51.16:0,51,3303	1/1:10,8:18:27.03:987,27,0	1/1:13,9:22:27.09:1212,27,0	1/1:19,1:20:9.02:191,9,0	0/0:26,0:26:54.18:0,54,3645	1/1:9,11:20:36.11:1506,36,0	1/1:8,5:13:11.98:321,12,0	0/0:29,0:32:75.26:0,75,5360	0/0:27,0:28:72.23:0,72,4642	0/0:38,0:38:87.27:0,87,5797	0/0:20,0:20:48.15:0,48,3263	0/0:24,0:24:63.20:0,63,4445	0/0:30,0:31:84.29:0,84,5699	1/1:9,9:18:27.01:907,27,0	0/1:12,8:18:69.82:1182,0,70	1/1:8,13:21:33.10:1369,33,0	1/1:15,4:19:8.98:193,9,0	0/0:21,0:22:54.18:0,54,3711	0/0:24,0:24:60.21:0,60,4045	0/0:29,0:32:75.24:0,75,5075	1/1:7,18:25:51.11:2078,51,0	1/1:8,0:22:2.39:994,2,0	1/1:7,17:24:51.16:2178,51,0	0/1:5,0:9:7.87:322,0,8
chr10	38094244	.	TGC	T	1487.85	PASS	AB=1.000;AC=27;AF=0.482;AN=56;BaseQRankSum=16.368;DP=613;FS=9.687;HRun=0;HaplotypeScore=178.6549;InbreedingCoeff=0.7495;MQ=54.65;MQ0=10;MQRankSum=-12.647;QD=6.00;ReadPosRankSum=2.876;VQSLOD=2.4196;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:67.76:0,68,1559	1/1:10,0:10:25.66:132,26,0	0/0:26,0:14:25.08:0,25,295	0/1:24,0:19:55.03:55,0,316	0/0:21,0:21:61.24:0,61,892	1/1:10,1:11:22.88:126,23,0	1/1:17,0:17:25.46:130,25,0	1/1:14,1:15:7.66:45,8,0	0/0:25,0:25:30.14:0,30,830	1/1:15,0:15:34.24:184,34,0	1/1:13,1:14:8.05:37,8,0	0/0:33,0:33:37.50:0,37,1219	0/0:28,0:28:54.50:0,54,1118	0/0:31,0:31:90.65:0,91,1523	0/0:23,1:24:26.29:0,26,926	0/0:22,0:22:52.99:0,53,1007	0/0:33,0:33:72.83:0,73,1364	1/1:16,0:15:17.08:87,17,0	1/1:21,0:18:25.57:130,26,0	1/1:21,0:20:31.40:169,31,0	1/1:15,0:15:2.88:15,3,0	0/0:24,0:24:36.15:0,36,876	0/0:24,0:24:27.05:0,27,755	0/0:32,0:32:57.81:0,58,1249	1/1:20,0:20:42.61:217,43,0	0/1:17,0:16:14.38:92,0,14	1/1:25,1:25:48.48:255,48,0	0/1:6,0:6:8.47:30,0,8
chr10	38094246	.	CGT	C	947.29	PASS	AB=0.989;AC=20;AF=0.357;AN=56;BaseQRankSum=15.432;DP=622;FS=2.226;HRun=0;HaplotypeScore=176.9067;InbreedingCoeff=0.3235;MQ=54.01;MQ0=10;MQRankSum=-12.349;QD=4.17;ReadPosRankSum=5.325;VQSLOD=2.5300;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:40,2:42:33.73:0,34,1469	1/1:9,0:9:23.94:112,24,0	0/0:24,0:12:23.91:0,24,320	0/0:25,0:20:7.73:0,8,261	0/0:21,0:21:51.17:0,51,794	1/1:11,0:11:3.64:75,4,0	0/1:16,0:16:73.05:78,0,73	0/0:29,0:29:60.92:0,61,511	0/0:23,2:25:22.96:0,23,784	0/1:19,0:19:67.98:102,0,68	0/1:13,0:13:15.34:15,0,30	0/0:30,1:31:22.31:0,22,1108	0/0:27,0:27:65.39:0,65,960	0/0:31,0:31:79.15:0,79,1268	0/0:24,0:24:45.49:0,45,966	0/0:22,1:23:23.29:0,23,884	0/0:35,0:35:53.49:0,53,1248	0/1:15,0:14:48.76:49,0,79	0/1:18,0:16:68.37:79,0,68	1/1:16,0:15:6.83:108,7,0	0/1:14,0:14:4.52:5,0,27	0/0:22,1:23:19.47:0,19,761	0/1:23,1:24:22.69:23,0,629	0/0:34,0:34:81.86:0,82,1206	1/1:23,0:23:12.12:166,12,0	1/1:15,0:14:25.56:126,26,0	0/1:29,0:28:45.20:154,0,45	1/1:4,0:4:8.52:42,9,0
chr10	38094550	.	C	CCCAGG	17818.23	PASS	AB=0.764;AC=24;AF=0.429;AN=56;BaseQRankSum=-11.765;DP=709;FS=0.985;HRun=0;HaplotypeScore=122.6742;InbreedingCoeff=0.8717;MQ=66.74;MQ0=1;MQRankSum=-12.372;QD=63.19;ReadPosRankSum=-1.150;VQSLOD=5.3766;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,144,3121	1/1:3,11:15:36.12:1134,36,0	0/0:33,0:26:69.69:0,70,1417	0/0:27,0:21:54.17:0,54,1079	0/0:23,0:23:63.22:0,63,1364	1/1:4,11:15:36.04:920,36,0	1/1:5,19:25:54.14:1628,54,0	1/1:12,16:32:90.14:2449,90,0	0/0:23,0:23:69.19:0,69,1438	1/1:2,18:26:72.23:1968,72,0	1/1:1,11:12:24.08:753,24,0	0/0:31,0:31:90.29:0,90,1856	0/0:27,0:27:81.26:0,81,1712	0/0:26,0:26:69.24:0,69,1479	0/0:32,0:32:90.31:0,90,1937	0/0:27,0:27:75.26:0,75,1570	0/0:37,0:37:99:0,108,2342	1/1:3,19:23:57.11:1655,57,0	1/1:10,13:24:50.97:1477,51,0	0/1:3,11:14:38.03:727,0,38	1/1:5,18:24:51.17:1593,51,0	0/0:27,0:27:78.24:0,78,1592	0/0:18,0:18:51.16:0,51,1059	0/0:38,0:38:99:0,111,2360	1/1:2,9:11:30.06:849,30,0	0/1:29,1:30:4.68:5,0,1759	1/1:3,25:31:84.29:2659,84,0	0/0:8,0:8:24.08:0,24,521
chr10	38095213	.	ATGTGTG	A	2345.03	PASS	AB=0.849;AC=18;AF=0.321;AN=56;BaseQRankSum=-3.221;DP=587;FS=1.345;HRun=0;HaplotypeScore=149.8543;InbreedingCoeff=0.6687;MQ=48.75;MQ0=35;MQRankSum=-4.811;QD=14.94;ReadPosRankSum=2.042;VQSLOD=3.0804;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:22:24.08:0,24,608	1/1:7,2:8:2.99:24,3,0	0/0:61,0:21:42.09:0,42,1103	0/0:64,0:23:45.40:0,45,1073	0/0:5,0:17:12.02:0,12,65	1/1:2,10:13:12.04:239,12,0	0/0:11,6:16:1.15:0,1,3	1/1:12,12:23:33.10:594,33,0	0/0:3,0:15:32.91:0,33,689	1/1:4,15:20:33.11:659,33,0	0/0:6,12:18:0.47:0,0,1	0/0:8,0:24:46.04:0,46,1165	0/0:7,0:19:30.09:0,30,680	0/0:7,0:18:7.53:0,8,102	0/0:5,0:18:34.64:0,35,461	0/0:8,0:9:8.85:0,9,56	0/0:3,0:17:20.95:0,21,431	1/1:3,3:7:6.02:106,6,0	0/1:17,6:20:22.47:336,0,22	1/1:6,8:13:6.02:120,6,0	0/1:17,2:16:26.87:79,0,27	0/0:8,0:27:35.25:0,35,262	0/0:12,0:30:45.45:0,45,1156	0/0:9,0:15:27.09:0,27,751	1/1:5,11:15:3.48:65,3,0	0/0:7,0:14:27.09:0,27,617	1/1:6,6:10:14.36:307,14,0	0/0:7,0:8:18.06:0,18,404
chr10	38096364	.	GCTCTCTCTCT	G	646.25	PASS	AB=0.633;AC=13;AF=0.241;AN=54;BaseQRankSum=3.444;DP=558;FS=14.306;HRun=0;HaplotypeScore=182.6127;InbreedingCoeff=0.6345;MQ=60.34;MQ0=10;MQRankSum=-1.288;QD=7.02;ReadPosRankSum=0.289;VQSLOD=1.8069;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:28:24.08:0,24,1010	0/0:16,0:16:22.32:0,22,868	0/0:24,0:21:11.07:0,11,316	0/0:35,0:21:12.04:0,12,476	1/1:5,0:6:2.99:24,3,0	0/0:15,0:17:12.04:0,12,542	0/0:33,0:35:27.08:0,27,1046	0/0:31,0:31:27.04:0,27,866	0/1:8,0:18:44.75:45,0,45	0/0:28,0:26:33.11:0,33,1336	0/0:10,0:9:3.01:0,3,150	0/0:10,0:15:14.98:0,15,240	1/1:9,3:12:3.01:73,3,0	1/1:6,3:9:2.99:24,3,0	1/1:10,4:17:5.99:180,6,0	1/1:11,6:17:12.03:276,12,0	1/1:8,1:11:9.03:179,9,0	0/0:15,0:14:15.05:0,15,641	0/0:22,0:20:29.46:0,29,1086	0/0:21,0:20:6.02:0,6,260	0/0:30,0:32:18.05:0,18,717	./.	0/0:11,0:13:5.98:0,6,125	0/0:15,0:21:15.05:0,15,271	0/0:21,0:20:12.04:0,12,510	0/0:20,0:20:21.07:0,21,746	0/0:15,0:16:12.04:0,12,563	0/0:17,0:18:15.05:0,15,496
chr10	38096413	.	TGC	T	1186.24	PASS	AB=0.916;AC=30;AF=0.556;AN=54;BaseQRankSum=-0.274;DP=709;FS=47.079;HRun=0;HaplotypeScore=158.8419;InbreedingCoeff=0.1925;MQ=38.51;MQ0=43;MQRankSum=-2.650;QD=2.45;ReadPosRankSum=-3.611;VQSLOD=0.0820;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:27:7.79:0,8,211	1/1:11,0:9:8.83:56,9,0	0/0:45,0:7:9.86:0,10,69	0/0:68,0:18:15.51:0,16,364	0/1:10,0:9:0.24:4,0,0	1/1:19,2:18:12.31:84,12,0	0/1:29,4:21:3.28:43,0,3	1/1:13,0:8:6.93:86,7,0	0/1:30,1:23:10.13:10,0,77	1/1:18,2:17:33.46:236,33,0	./.	0/1:39,1:29:59.90:60,0,160	0/1:21,0:17:30:30,0,71	1/1:19,0:15:2.22:12,2,0	0/0:32,0:23:12.50:0,12,128	0/1:25,0:21:17.84:18,0,42	0/1:24,0:19:19.99:62,0,20	1/1:20,2:18:19.24:156,19,0	1/1:18,4:18:23.67:330,24,0	0/1:5,6:10:0:0,0,0	1/1:72,2:48:5.96:49,6,0	0/1:21,0:20:11.38:11,0,14	1/1:8,0:6:1.80:5,2,0	0/0:35,0:25:16.15:0,16,206	0/1:11,5:14:0.05:1,0,0	0/1:18,0:9:7.12:7,0,30	0/1:9,3:11:0.93:86,0,1	0/0:3,0:3:4.93:0,5,21
chr10	38096421	.	TGTG	T	1564.99	PASS	AB=0.991;AC=24;AF=0.444;AN=54;BaseQRankSum=0.792;DP=894;FS=28.634;HRun=0;HaplotypeScore=186.1890;InbreedingCoeff=-0.3965;MQ=35.53;MQ0=80;MQRankSum=-1.380;QD=2.30;ReadPosRankSum=-0.522;VQSLOD=1.1961;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:36,0:25:11.08:11,0,152	0/1:10,0:8:20.50:43,0,20	0/0:41,0:6:6.75:0,7,79	0/0:65,0:17:21.78:0,22,321	0/0:11,0:9:0.85:0,1,3	0/1:25,0:20:36.63:73,0,37	0/1:61,0:36:59.83:60,0,107	0/1:26,0:7:27.08:64,0,27	0/1:39,0:24:38:38,0,79	0/1:19,0:13:76.06:124,0,76	./.	0/0:49,0:36:1.62:0,2,227	0/1:32,0:23:49.41:79,0,49	1/1:26,0:17:3.61:16,4,0	0/1:44,0:26:65.10:85,0,65	0/1:34,0:25:22.25:105,0,22	0/1:33,0:23:74.09:74,0,163	0/1:28,0:20:99:181,0,131	0/1:27,0:19:99:210,0,273	0/1:11,0:9:0:1,0,0	1/1:114,0:62:1.57:3,2,0	0/0:21,0:19:1.49:0,1,5	0/1:11,0:7:0.12:0,0,0	0/1:47,0:32:14.46:14,0,119	0/0:21,0:16:0.35:0,0,1	0/1:27,6:18:99:301,0,137	0/1:17,0:15:9.82:82,0,10	1/1:2,2:4:9.03:138,9,0
chr10	38096423	.	TG	T	1387.53	PASS	AB=0.859;AC=25;AF=0.463;AN=54;BaseQRankSum=0.091;DP=916;FS=92.210;HRun=2;HaplotypeScore=188.2451;InbreedingCoeff=-0.3953;MQ=35.06;MQ0=85;MQRankSum=-0.828;QD=1.85;ReadPosRankSum=2.866;VQSLOD=-0.6972;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:35,1:26:30.53:31,0,58	0/1:7,2:7:20.90:36,0,21	0/0:40,0:6:6.75:0,7,56	0/0:65,1:16:21.78:0,22,255	0/0:11,0:9:2.49:0,2,6	0/1:21,5:20:29.75:71,0,30	0/1:52,10:36:69.24:69,0,107	0/1:22,4:6:16.98:65,0,17	0/1:32,7:24:32.23:50,0,32	0/1:17,5:14:75.86:107,0,76	./.	0/1:42,7:36:91.79:92,0,109	1/1:24,7:23:4.23:90,4,0	0/1:25,2:17:1.51:2,0,2	0/1:41,6:27:32.89:84,0,33	0/1:31,4:25:20.67:93,0,21	0/1:28,4:23:72.05:72,0,145	0/1:25,6:22:99:182,0,173	0/1:22,6:19:99:164,0,241	0/1:3,8:9:0:1,0,0	1/1:111,11:66:0.78:2,1,0	0/0:18,2:18:0.92:0,1,3	0/1:11,0:7:0.15:0,0,0	0/1:39,7:31:25.19:25,0,33	0/0:14,7:16:0.76:0,1,2	0/1:32,3:20:99:146,0,144	0/1:11,5:15:6.99:73,0,7	1/1:4,0:4:8.81:70,9,0
chr10	38096424	.	G	GT	1919.87	PASS	AB=0.875;AC=25;AF=0.463;AN=54;BaseQRankSum=-0.381;DP=932;FS=111.243;HRun=1;HaplotypeScore=195.7758;InbreedingCoeff=-0.2993;MQ=33.61;MQ0=86;MQRankSum=0.339;QD=2.58;ReadPosRankSum=3.826;VQSLOD=0.1352;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:22,2:26:45.68:146,0,46	0/1:7,0:5:26.35:36,0,26	0/0:39,0:5:6.75:0,7,54	0/0:64,0:16:21.72:0,22,226	0/0:4,3:8:2.49:0,2,7	0/1:23,2:19:27.03:82,0,27	0/1:60,0:36:61.27:61,0,108	1/1:27,0:6:9.39:85,9,0	0/1:27,9:23:7.23:140,0,7	0/1:21,0:14:71.87:86,0,72	./.	0/1:34,14:35:98.41:165,0,98	1/1:25,10:26:6.86:171,7,0	0/0:23,4:17:1.83:0,2,8	0/1:36,6:27:12.34:140,0,12	0/1:26,6:26:9.82:123,0,10	0/1:29,3:23:99:122,0,145	0/1:31,0:22:99:202,0,133	0/1:26,1:19:99:139,0,213	0/1:11,1:9:0:0,0,0	1/1:118,3:65:0.77:2,1,0	0/0:10,7:17:0.92:0,1,4	0/1:8,5:9:0.21:0,0,0	0/1:34,10:30:12.36:157,0,12	0/0:20,1:16:2.67:0,3,8	0/1:36,2:23:99:107,0,124	0/1:10,2:10:6.61:51,0,7	1/1:4,0:4:5.04:43,5,0
chr10	38096436	.	TGTG	T	1010.36	PASS	AB=0.957;AC=22;AF=0.407;AN=54;BaseQRankSum=3.108;DP=1099;FS=0.603;HRun=0;HaplotypeScore=214.6366;InbreedingCoeff=-0.4484;MQ=26.54;MQ0=132;MQRankSum=-1.872;QD=1.12;ReadPosRankSum=-0.562;VQSLOD=2.4713;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:49,0:32:0.60:1,0,299	0/1:8,0:6:32.55:37,0,33	0/0:30,0:2:4.26:0,4,54	0/0:60,0:11:0.04:0,0,135	1/1:12,0:8:0.47:1,0,0	1/1:28,1:18:2.62:58,3,0	0/1:78,3:43:68.12:68,0,176	0/1:37,0:9:7.20:40,0,7	0/1:39,0:20:23.18:23,0,172	0/1:31,2:18:63.41:63,0,70	./.	0/1:62,0:43:23.57:24,0,445	0/1:39,0:26:99:113,0,139	0/0:35,0:20:6.31:0,6,29	0/1:56,0:31:97.70:113,0,98	0/1:45,0:28:20.69:136,0,21	0/1:43,0:29:78.65:79,0,179	0/1:33,2:25:99:108,0,198	0/1:34,4:18:99:127,0,301	0/1:4,6:7:0:0,0,0	0/1:160,2:82:3.90:4,0,9	0/0:23,0:19:3.01:0,3,40	0/0:19,0:14:2.40:0,2,37	0/1:54,0:33:3.97:4,0,211	0/0:16,5:15:1.74:0,2,7	0/1:50,0:28:42.73:43,0,252	0/1:12,2:11:23.84:99,0,24	0/0:5,0:5:2.50:0,2,6
chr10	38096445	.	TGTGTGA	T	1878.79	PASS	AB=0.975;AC=22;AF=0.440;AN=50;BaseQRankSum=1.300;DP=1160;FS=51.863;HRun=0;HaplotypeScore=224.7525;InbreedingCoeff=-0.4837;MQ=23.69;MQ0=152;MQRankSum=-2.974;QD=1.98;ReadPosRankSum=0.429;VQSLOD=0.9633;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:45,1:30:63.98:64,0,370	1/1:7,0:5:8.65:70,9,0	./.	0/0:51,0:4:5.24:0,5,82	./.	1/1:25,1:17:13.39:114,13,0	0/1:90,0:47:99:113,0,179	0/0:45,0:13:20.23:0,20,209	0/1:41,0:22:91.38:91,0,142	0/1:37,0:20:39.23:39,0,173	./.	0/1:67,0:42:80.32:80,0,549	0/1:39,0:27:99:115,0,167	0/1:39,0:19:6.35:6,0,37	0/1:55,0:29:27.39:27,0,191	0/1:48,0:30:26.12:166,0,26	0/1:44,1:29:99:198,0,179	0/1:39,0:27:99:194,0,233	0/1:38,0:15:20.95:58,0,21	0/1:12,0:7:0:0,0,0	0/1:182,0:91:20.84:61,0,21	0/0:23,0:17:2.84:0,3,72	0/0:22,0:17:2.49:0,2,59	0/1:58,0:34:23.70:24,0,143	0/0:21,0:15:3.66:0,4,24	0/1:51,4:30:59.94:457,0,60	0/1:15,0:12:15.54:16,0,27	0/1:2,2:4:10.79:128,0,11
chr10	38096448	.	GTGA	G	874.81	PASS	AB=0.961;AC=21;AF=0.404;AN=52;BaseQRankSum=1.009;DP=1145;FS=18.704;HRun=0;HaplotypeScore=212.3277;InbreedingCoeff=-0.4354;MQ=22.42;MQ0=153;MQRankSum=-2.025;QD=0.97;ReadPosRankSum=-1.402;VQSLOD=0.8321;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:43,1:30:99:104,0,332	1/1:6,0:4:8.40:50,8,0	0/0:26,0:1:2.98:0,3,21	0/0:46,0:2:6.02:0,6,90	./.	1/1:26,1:17:1.53:45,2,0	0/1:83,3:46:47.39:47,0,170	0/1:45,1:13:6.67:7,0,190	0/0:37,0:21:6.71:0,7,160	0/1:36,2:21:37.77:38,0,198	./.	0/1:61,1:41:26.97:27,0,599	0/1:41,1:26:0.66:1,0,144	0/1:38,1:18:20.76:84,0,21	0/0:47,0:24:2.35:0,2,129	0/1:42,1:28:23.35:120,0,23	0/1:41,2:29:99:119,0,185	0/1:39,1:27:80.78:81,0,291	0/1:37,0:14:15.04:15,0,127	0/1:11,0:7:0:0,0,0	0/1:175,6:91:7.24:7,0,52	0/0:19,0:14:3.01:0,3,54	0/0:19,2:17:2.15:0,2,50	0/1:57,1:35:53.11:53,0,192	0/0:22,0:16:2.42:0,2,40	0/1:53,3:31:99:164,0,184	0/1:15,0:11:20.52:21,0,75	0/1:5,0:5:28.65:29,0,37
chr10	38096501	.	GGT	G	108.45	PASS	AB=0.986;AC=14;AF=0.269;AN=52;BaseQRankSum=2.105;DP=1687;DS;FS=8.595;HRun=0;HaplotypeScore=269.9038;InbreedingCoeff=-0.1163;MQ=18.40;MQ0=564;MQRankSum=-1.432;QD=0.11;ReadPosRankSum=-1.775;VQSLOD=1.0770;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:65,1:29:0.62:1,0,190	1/1:20,0:4:2.68:11,3,0	./.	./.	0/0:26,0:14:9.03:0,9,122	0/0:53,0:24:25.58:0,26,280	0/0:134,2:64:20.25:0,20,551	0/1:93,1:19:0.55:1,0,243	0/1:58,0:15:21.57:22,0,87	0/1:77,0:19:0.59:1,0,189	0/0:17,0:8:6.02:0,6,92	0/1:69,1:26:16.68:17,0,178	0/1:58,1:24:37.92:38,0,171	0/0:64,0:23:15.69:0,16,169	0/1:51,0:21:5.66:6,0,88	0/0:60,0:27:7.02:0,7,327	0/1:69,0:42:72.76:73,0,411	0/0:61,0:28:16.66:0,17,408	0/0:58,1:16:13.92:0,14,316	0/0:23,0:8:1.24:0,1,3	0/1:229,3:112:5.69:6,0,278	0/0:40,0:18:14.96:0,15,206	0/1:38,2:25:0:0,0,0	0/1:96,2:51:24.87:25,0,89	0/0:52,2:24:18.18:0,18,212	0/0:75,2:29:7.42:0,7,517	0/0:28,0:11:5.92:0,6,61	0/1:26,0:15:35.50:36,0,270
chr10	38096511	.	TGTG	T	102.01	PASS	AB=0.988;AC=8;AF=0.154;AN=52;BaseQRankSum=3.199;DP=1779;DS;FS=12.336;HRun=0;HaplotypeScore=285.8914;InbreedingCoeff=0.0811;MQ=18.56;MQ0=575;MQRankSum=-1.953;QD=0.16;ReadPosRankSum=-3.903;VQSLOD=0.3585;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:75,0:33:5.56:0,6,241	1/1:20,1:6:5.78:67,6,0	./.	./.	0/0:30,1:17:9.03:0,9,179	0/0:57,0:27:18.75:0,19,393	0/0:141,2:64:5.41:0,5,684	0/1:87,2:17:99:104,0,266	0/0:66,0:18:16.75:0,17,162	0/1:75,1:22:16.75:17,0,560	0/0:18,1:8:6.02:0,6,133	0/0:80,0:31:28.53:0,29,408	0/0:62,0:23:27.23:0,27,351	0/0:64,0:23:21.81:0,22,294	0/0:63,0:24:12.55:0,13,167	0/0:67,0:29:33:0,33,570	0/1:68,0:37:16.91:17,0,770	0/0:69,0:33:30.04:0,30,929	0/0:65,0:16:33.01:0,33,597	0/1:28,0:12:9.11:9,0,28	0/1:244,6:124:3.97:4,0,464	0/0:42,0:19:15.76:0,16,263	0/0:39,0:23:0:0,0,1	0/1:106,0:56:4.26:4,0,187	0/0:54,0:24:15.28:0,15,233	0/0:87,0:32:58.94:0,59,1140	0/0:32,0:13:12.68:0,13,206	0/0:25,0:14:32.61:0,33,539
chr10	38096602	.	TGTGTG	T	288.06	PASS	AB=0.987;AC=12;AF=0.231;AN=52;BaseQRankSum=5.553;DP=1644;DS;FS=17.610;HRun=0;HaplotypeScore=227.4853;InbreedingCoeff=-0.1409;MQ=18.05;MQ0=465;MQRankSum=-0.382;QD=0.37;ReadPosRankSum=-3.149;VQSLOD=1.0128;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:72,0:35:8.90:9,0,156	1/1:24,0:12:5.59:30,6,0	./.	./.	0/0:32,0:15:3.01:0,3,63	0/1:55,0:29:58.33:58,0,169	0/0:116,2:61:3.19:0,3,468	0/0:105,0:23:32.61:0,33,730	0/1:33,0:16:15.88:16,0,112	0/1:81,1:22:29.81:30,0,579	0/0:21,0:10:2.20:0,2,7	0/0:63,0:24:15.22:0,15,324	0/0:49,1:22:13.13:0,13,229	0/0:50,0:21:9.62:0,10,57	0/0:51,1:24:6.49:0,6,124	0/1:46,1:23:81.56:82,0,236	0/1:47,2:28:37.92:38,0,458	0/0:56,0:33:17.40:0,17,638	0/1:70,0:12:20.34:20,0,278	0/1:37,0:21:5.94:6,0,56	0/1:216,6:98:58.07:60,0,58	0/0:48,0:21:5.98:0,6,127	0/0:27,0:13:5.90:0,6,87	0/1:78,3:34:2.74:78,0,3	0/0:71,0:42:18.32:0,18,288	0/0:97,0:36:50.85:0,51,1058	0/0:19,0:9:1.81:0,2,98	0/0:27,0:14:8.61:0,9,194
chr10	38096604	.	TGTG	T	195.04	PASS	AB=0.983;AC=11;AF=0.212;AN=52;BaseQRankSum=5.174;DP=1610;DS;FS=15.312;HRun=0;HaplotypeScore=215.1463;InbreedingCoeff=-0.0475;MQ=18.03;MQ0=453;MQRankSum=-1.042;QD=0.26;ReadPosRankSum=-2.471;VQSLOD=1.3389;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:70,0:35:17.95:0,18,155	1/1:24,0:12:5.67:32,6,0	./.	./.	0/0:28,0:14:3.01:0,3,61	0/1:53,1:28:79.80:80,0,158	0/0:108,4:60:37.72:0,38,473	0/1:108,1:22:0.94:1,0,608	0/1:32,0:15:7.09:7,0,83	0/0:83,2:23:10.49:0,10,528	0/0:17,1:9:2.20:0,2,7	0/0:62,0:24:17.97:0,18,254	0/0:50,0:22:12.01:0,12,148	0/0:50,0:21:7.84:0,8,66	0/0:48,2:24:9.56:0,10,135	0/1:46,0:21:53.06:53,0,218	0/1:48,0:28:6.68:7,0,395	0/1:52,3:30:4.28:4,0,454	0/1:70,0:11:8.82:9,0,236	0/0:36,1:21:3.95:0,4,46	0/1:215,3:96:38.66:51,0,39	0/0:49,0:22:5.98:0,6,108	0/0:27,0:13:5.06:0,5,64	0/1:75,5:33:1.82:80,0,2	0/0:68,2:40:19.39:0,19,266	0/0:96,0:36:41.93:0,42,815	0/0:19,0:9:1.66:0,2,81	0/0:27,0:14:9.49:0,9,173
chr10	38096621	.	GTGTA	G	346.25	PASS	AB=0.976;AC=13;AF=0.260;AN=50;BaseQRankSum=2.079;DP=1227;DS;FS=24.335;HRun=0;HaplotypeScore=165.9502;InbreedingCoeff=-0.1605;MQ=17.97;MQ0=322;MQRankSum=-0.651;QD=0.58;ReadPosRankSum=-0.402;VQSLOD=0.8750;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:50,1:25:4.49:56,0,4	0/0:17,0:9:3.11:0,3,17	./.	./.	0/0:21,1:11:3.01:0,3,51	0/1:35,1:17:7.71:8,0,72	0/1:74,3:38:99:103,0,156	0/0:93,1:29:19.51:0,20,701	0/1:20,0:11:52.65:53,0,78	0/1:62,1:20:2.38:2,0,437	./.	0/0:40,0:19:6.67:0,7,73	0/0:42,0:19:6.38:0,6,112	0/0:30,0:16:8.72:0,9,84	1/1:35,0:18:5.45:25,5,0	0/1:34,1:19:3.68:14,0,4	0/1:30,0:18:28.45:28,0,130	0/1:40,1:18:62.69:63,0,146	0/1:63,0:10:13.85:47,0,14	0/0:18,1:9:0:0,0,0	0/0:184,3:85:8.83:0,9,231	0/0:28,0:15:3.01:0,3,65	0/0:21,0:10:4.57:0,5,71	0/1:68,2:33:17.36:17,0,20	0/0:47,2:31:8.62:0,9,80	0/1:72,1:32:63.33:63,0,614	0/0:14,0:8:9.66:0,10,87	0/0:14,0:7:6.02:0,6,123
chr10	38096623	.	GTA	G	425.94	PASS	AB=0.943;AC=18;AF=0.360;AN=50;BaseQRankSum=3.019;DP=1165;DS;FS=25.160;HRun=0;HaplotypeScore=156.9962;InbreedingCoeff=-0.2481;MQ=18.02;MQ0=304;MQRankSum=-0.389;QD=0.63;ReadPosRankSum=0.431;VQSLOD=1.2276;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:46,2:23:0.55:42,0,1	0/1:12,2:7:7:13,0,7	./.	./.	0/0:20,0:11:2.96:0,3,19	0/1:36,1:17:13.02:13,0,48	0/1:64,8:35:76.98:77,0,120	0/0:86,0:29:33.35:0,33,509	0/1:15,2:11:32.20:32,0,65	0/1:59,3:19:54.33:54,0,289	./.	0/0:37,0:19:7.83:0,8,55	0/1:38,2:18:23.98:24,0,60	0/1:29,1:17:3.57:4,0,38	1/1:34,3:18:4.92:45,5,0	1/1:30,3:17:4.52:38,5,0	0/1:27,1:17:28:28,0,36	0/1:34,3:16:98.21:128,0,98	0/1:60,0:10:4.86:17,0,5	0/0:19,0:9:1.25:0,1,3	0/0:168,9:84:4.99:0,5,204	0/0:25,0:15:3.01:0,3,55	0/0:19,0:10:3.94:0,4,59	0/1:61,5:31:18.34:22,0,18	0/0:41,4:27:8.61:0,9,65	0/1:69,1:30:19.67:20,0,383	0/1:14,0:7:8.34:8,0,36	0/0:13,0:6:5.81:0,6,103
chr10	38098776	.	AT	A	3006.35	PASS	AB=0.886;AC=41;AF=0.891;AN=46;BaseQRankSum=-2.006;DP=220;FS=58.202;HRun=3;HaplotypeScore=73.8252;InbreedingCoeff=0.0858;MQ=60.15;MQ0=0;MQRankSum=-3.598;QD=17.08;ReadPosRankSum=2.373;VQSLOD=0.0375;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	1/1:4,0:4:9.02:98,9,0	0/1:10,2:7:33.80:114,0,34	0/1:6,2:4:5.41:60,0,5	./.	1/1:11,0:11:30.08:328,30,0	1/1:10,0:10:12.03:131,12,0	1/1:9,0:9:27.06:289,27,0	1/1:8,0:8:6.01:64,6,0	1/1:15,0:15:45.12:490,45,0	1/1:6,0:6:3.01:33,3,0	1/1:10,0:10:9.02:98,9,0	1/1:5,0:5:3.01:33,3,0	./.	./.	1/1:7,0:7:3.01:32,3,0	1/1:6,0:6:9.02:99,9,0	1/1:8,0:8:21.05:227,21,0	1/1:8,0:8:24.03:252,24,0	1/1:6,0:6:3.01:32,3,0	1/1:4,0:4:2.96:32,3,0	0/0:6,0:6:0:0,0,1	./.	0/1:12,0:12:0:0,0,0	1/1:10,0:10:30.08:330,30,0	1/1:6,0:6:12.02:123,12,0	1/1:7,0:7:9.02:100,9,0	1/1:4,0:4:12.03:132,12,0
chr10	38098782	.	GA	G	3381.17	PASS	AB=0.950;AC=53;AF=0.946;AN=56;BaseQRankSum=-1.271;DP=274;FS=67.356;HRun=3;HaplotypeScore=86.5719;InbreedingCoeff=0.1712;MQ=79.25;MQ0=0;MQRankSum=-5.836;QD=12.34;ReadPosRankSum=2.963;VQSLOD=-0.4294;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:13,1:14:2.77:21,3,0	1/1:4,0:4:12:121,12,0	0/1:21,2:18:50.58:51,0,196	0/1:12,1:9:3.91:4,0,117	1/1:5,0:5:1.29:4,1,0	1/1:12,0:12:30.08:331,30,0	1/1:12,0:12:12.03:134,12,0	1/1:13,0:13:31.47:316,31,0	1/1:11,0:11:11:91,11,0	1/1:17,0:17:45.59:493,46,0	1/1:9,0:9:3.95:35,4,0	1/1:12,0:12:16.80:147,17,0	1/1:6,1:7:6.42:50,6,0	1/1:12,0:12:3.63:10,4,0	1/1:11,0:11:11.01:73,11,0	1/1:8,0:8:11.69:85,12,0	1/1:7,0:7:6.64:94,7,0	1/1:8,0:8:21.06:233,21,0	1/1:9,0:9:21.53:229,22,0	1/1:9,0:9:2.70:33,3,0	1/1:6,0:6:3.01:33,3,0	0/1:6,0:6:0.45:1,0,0	1/1:4,0:4:1.36:4,1,0	1/1:13,0:13:8.80:53,9,0	1/1:10,0:10:30.08:328,30,0	1/1:7,0:7:16.57:154,17,0	1/1:8,0:8:12.02:122,12,0	1/1:4,0:4:12.03:131,12,0
chr10	38099589	.	G	GCT	13627.80	PASS	AB=0.939;AC=25;AF=0.446;AN=56;BaseQRankSum=-18.085;DP=653;FS=4.440;HRun=0;HaplotypeScore=74.9236;InbreedingCoeff=0.9108;MQ=74.63;MQ0=0;MQRankSum=-1.689;QD=43.40;ReadPosRankSum=0.392;VQSLOD=5.9662;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:87.27:0,87,1243	1/1:0,15:16:33.07:617,33,0	0/0:13,0:13:18.03:0,18,222	0/0:11,0:10:5.70:0,6,72	0/0:27,0:27:75.24:0,75,1087	1/1:1,19:20:57.20:1067,57,0	1/1:3,17:20:42.14:787,42,0	1/1:2,29:31:87.27:1529,87,0	0/0:28,0:28:84.28:0,84,1236	1/1:0,33:33:99:1820,99,0	1/1:0,10:10:27.09:506,27,0	0/0:24,0:24:72.23:0,72,1042	0/0:29,0:29:78.26:0,78,1137	0/0:20,0:20:60.19:0,60,865	0/0:33,0:33:96.29:0,96,1358	0/0:25,0:25:75.25:0,75,1103	0/0:26,0:26:75.25:0,75,1103	1/1:0,32:32:78.27:1461,78,0	1/1:1,16:17:48.14:818,48,0	1/1:0,23:24:69.15:1232,69,0	1/1:2,37:39:99:1910,102,0	0/0:28,0:28:84.22:0,84,1175	0/0:21,0:21:63.19:0,63,891	0/0:18,0:18:54.14:0,54,737	1/1:2,16:18:42.14:787,42,0	0/1:29,2:31:28.14:28,0,1062	1/1:0,23:23:57.20:1066,57,0	0/0:7,0:7:21.07:0,21,308
chr10	38100177	.	C	CGT	2827.19	PASS	AB=0.720;AC=16;AF=0.571;AN=28;BaseQRankSum=-1.576;DP=488;FS=0.674;HRun=0;HaplotypeScore=127.4831;InbreedingCoeff=-0.5039;MQ=54.26;MQ0=17;MQRankSum=1.902;QD=7.38;ReadPosRankSum=-0.165;VQSLOD=3.1876;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:15,1:30:66.48:84,0,66	./.	./.	./.	0/1:17,9:26:99:114,0,132	./.	./.	./.	0/1:12,13:25:49.61:412,0,50	./.	./.	1/1:8,0:34:17.03:134,17,0	0/1:14,12:27:99:227,0,104	0/1:17,6:23:43.60:357,0,44	0/1:12,23:36:20.27:592,0,20	0/1:10,11:22:92.14:160,0,92	0/1:21,17:37:99:369,0,159	./.	./.	./.	./.	0/1:21,13:36:99:315,0,142	1/1:7,0:19:3.59:14,4,0	1/1:14,0:36:14.03:110,14,0	./.	0/1:19,0:30:46.15:51,0,46	./.	0/0:2,0:13:13.96:0,14,65
chr10	38100210	.	A	AC	675.18	PASS	AC=16;AF=0.308;AN=52;BaseQRankSum=5.116;DP=535;FS=2.153;HRun=1;HaplotypeScore=103.3768;InbreedingCoeff=0.7900;MQ=60.80;MQ0=10;MQRankSum=-6.180;QD=7.59;ReadPosRankSum=-2.817;VQSLOD=-0.2035;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:60.20:0,60,835	./.	0/0:25,0:15:45.14:0,45,614	0/0:32,0:18:54.17:0,54,723	0/0:22,0:22:54.18:0,54,741	./.	0/0:2,7:9:2.79:0,3,15	1/1:6,6:11:20.97:177,21,0	0/0:21,0:21:57.18:0,57,770	1/1:1,9:10:25.52:207,26,0	1/1:2,9:10:3:32,3,0	0/0:30,0:30:32.17:0,32,451	0/0:27,0:27:57.19:0,57,784	0/0:18,0:18:42.53:0,43,608	0/0:33,0:33:69.21:0,69,922	0/0:20,0:20:39.12:0,39,516	0/0:26,0:25:57.15:0,57,761	1/1:0,10:10:12.37:200,12,0	1/1:4,3:7:6.01:80,6,0	0/0:2,9:10:1.25:0,1,3	1/1:3,16:18:1.35:3,1,0	0/0:34,0:34:75.25:0,75,1031	0/0:20,0:19:10.55:0,11,257	0/0:34,0:34:35.22:0,35,538	1/1:3,8:11:7.24:58,7,0	0/0:25,1:25:45.90:0,46,923	1/1:0,9:9:1.26:85,1,0	0/0:17,0:17:30.10:0,30,419
chr10	38100211	.	T	TC	1078.09	PASS	AC=22;AF=0.407;AN=54;BaseQRankSum=3.824;DP=554;FS=1.173;HRun=0;HaplotypeScore=106.6423;InbreedingCoeff=0.8585;MQ=61.33;MQ0=10;MQRankSum=-4.696;QD=8.36;ReadPosRankSum=-3.537;VQSLOD=3.1413;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:66.16:0,66,865	1/1:2,1:3:2.92:17,3,0	0/0:25,0:15:45.15:0,45,620	0/0:33,0:19:54.18:0,54,742	0/0:22,0:22:54.18:0,54,755	./.	1/1:3,7:10:2.70:63,3,0	1/1:8,6:13:32.18:282,32,0	0/0:21,0:21:57.19:0,57,787	1/1:3,9:12:26.84:229,27,0	1/1:2,9:10:6.01:63,6,0	0/0:31,0:31:32.21:0,32,495	0/0:27,0:27:57.16:0,57,759	0/0:17,0:17:45.15:0,45,618	0/0:33,0:33:72.21:0,72,960	0/0:19,0:19:36.12:0,36,502	0/0:24,0:23:54.17:0,54,736	1/1:0,10:10:21.44:209,21,0	1/1:6,3:9:14.05:142,14,0	1/1:4,9:12:2.97:20,3,0	1/1:6,16:21:3.06:11,3,0	0/0:34,0:34:78.25:0,78,1070	0/0:19,0:18:10.57:0,11,277	0/0:34,0:34:38.21:0,38,562	1/1:4,8:12:8.99:80,9,0	0/0:26,1:26:45.83:0,46,938	1/1:4,9:13:17.13:160,17,0	0/0:17,0:17:30.10:0,30,419
chr10	38100738	.	CGA	C	10040.12	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=15.635;DP=701;FS=17.648;HRun=0;HaplotypeScore=88.6838;InbreedingCoeff=0.9851;MQ=91.39;MQ0=0;MQRankSum=-3.071;QD=38.92;ReadPosRankSum=0.601;VQSLOD=5.0656;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,150,2778	1/1:0,5:5:6.02:92,6,0	0/0:32,0:32:93.31:0,93,1688	0/0:23,0:23:60.13:0,60,1061	0/0:26,0:26:78.24:0,78,1435	1/1:0,19:19:36.12:551,36,0	1/1:1,25:26:66.22:1005,66,0	1/1:0,24:24:68.98:953,69,0	0/0:29,0:29:84.25:0,84,1582	1/1:0,27:27:75.15:1033,75,0	1/1:1,19:20:51.17:778,51,0	0/0:28,0:28:84.29:0,84,1612	0/0:29,0:29:87.28:0,87,1646	0/0:10,0:10:30.10:0,30,579	0/0:35,0:35:99:0,99,1776	0/0:32,0:32:96.31:0,96,1800	0/0:32,0:32:96.33:0,96,1840	1/1:0,18:18:45.15:688,45,0	1/1:0,22:22:66.17:938,66,0	1/1:2,28:30:81.27:1204,81,0	1/1:0,19:19:48.16:734,48,0	0/0:35,0:35:99:0,105,1876	0/0:19,0:19:54.17:0,54,1008	0/0:28,0:28:84.27:0,84,1588	1/1:1,16:17:48.16:734,48,0	0/0:24,0:24:72.23:0,72,1329	1/1:0,31:31:87.30:1330,87,0	0/0:9,0:9:27.08:0,27,487
chr10	38101604	.	A	AG	7609.71	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-14.366;DP=590;FS=3.396;HRun=4;HaplotypeScore=55.0405;InbreedingCoeff=0.9988;MQ=87.95;MQ0=0;MQRankSum=-0.560;QD=33.82;ReadPosRankSum=-0.184;VQSLOD=5.2358;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,114,1292	1/1:0,10:10:30.10:410,30,0	0/0:12,0:12:30.04:0,30,318	0/0:31,0:31:66.13:0,66,713	0/0:21,0:21:57.16:0,57,646	1/1:0,17:17:39.13:533,39,0	1/1:1,15:16:33.11:451,33,0	1/1:4,18:22:51.14:665,51,0	0/0:23,0:23:66.19:0,66,749	1/1:2,15:17:45.10:577,45,0	1/1:2,10:12:27.09:369,27,0	0/0:20,0:20:53.18:0,53,584	0/0:25,0:25:63.15:0,63,691	0/0:26,0:26:72.20:0,72,812	0/0:27,0:27:72.19:0,72,807	0/0:19,0:19:54.11:0,54,590	0/0:31,0:31:87.25:0,87,986	1/1:1,18:19:54.18:735,54,0	1/1:3,18:21:54.14:716,54,0	1/1:0,21:21:57.19:779,57,0	1/1:2,28:30:78.26:1062,78,0	0/0:24,0:24:69.20:0,69,782	0/0:10,0:10:24.05:0,24,263	0/0:22,0:22:60.15:0,60,669	1/1:1,13:14:27.09:369,27,0	0/0:21,1:22:22.13:0,22,638	1/1:1,25:26:69.23:943,69,0	0/0:12,0:12:36.06:0,36,386
chr10	38103403	.	A	AG	2770.60	PASS	AB=0.899;AC=37;AF=0.661;AN=56;BaseQRankSum=-4.052;DP=388;FS=0.000;HRun=10;HaplotypeScore=84.0873;InbreedingCoeff=-0.0592;MQ=81.50;MQ0=0;MQRankSum=-2.471;QD=7.80;ReadPosRankSum=-2.479;VQSLOD=1.7224;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:21,0:21:45.87:47,0,46	1/1:0,5:5:9.02:96,9,0	0/1:17,1:18:10.35:10,0,116	0/0:17,0:17:11.70:0,12,124	0/0:9,0:9:10.52:0,11,51	1/1:5,9:14:15.03:153,15,0	1/1:8,4:12:6.02:64,6,0	1/1:15,6:21:22.82:211,23,0	0/1:9,0:9:11.69:101,0,12	0/1:11,8:19:65.43:191,0,65	1/1:10,6:16:21.04:216,21,0	1/1:9,0:9:20.62:130,21,0	0/1:10,0:10:24.56:60,0,25	0/1:12,0:12:7.44:62,0,7	0/1:13,0:13:35.40:57,0,35	0/1:12,0:12:6.87:7,0,66	0/1:15,0:15:40.32:40,0,77	1/1:4,14:18:33.08:352,33,0	0/1:7,6:13:25.23:127,0,25	1/1:9,3:13:3.01:32,3,0	0/1:9,11:20:17.05:168,0,17	0/0:7,0:7:10.70:0,11,56	1/1:12,0:12:14.94:117,15,0	0/1:12,0:12:7.68:53,0,8	1/1:7,5:12:12.03:128,12,0	1/1:20,0:20:9.26:128,9,0	0/1:10,7:17:37.87:238,0,38	1/1:12,0:12:27.95:156,28,0
chr10	38103585	.	C	CTCTATCTA	9686.12	PASS	AB=1.000;AC=43;AF=0.827;AN=52;BaseQRankSum=-1.417;DP=562;FS=10.083;HRun=0;HaplotypeScore=147.3774;InbreedingCoeff=0.7216;MQ=64.02;MQ0=4;MQRankSum=-3.700;QD=21.34;ReadPosRankSum=0.148;VQSLOD=3.9522;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:16:6.05:124,6,0	1/1:1,8:9:15.05:619,15,0	0/0:34,0:19:17.39:0,17,211	0/0:15,0:11:2.08:0,2,23	1/1:34,0:39:14.35:222,14,0	1/1:6,10:17:12.04:467,12,0	1/1:9,11:20:12.04:329,12,0	1/1:47,0:47:57.07:864,57,0	1/1:5,0:19:12.04:369,12,0	1/1:7,10:17:35.84:1100,36,0	./.	1/1:5,0:16:8.06:201,8,0	1/1:4,0:18:15.05:459,15,0	1/1:1,0:10:2.04:6,2,0	1/1:9,0:19:9.92:278,10,0	1/1:19,0:19:29.98:363,30,0	1/1:6,0:18:12.04:386,12,0	1/1:9,1:10:9.03:232,9,0	1/1:12,9:24:39.06:989,39,0	1/1:9,25:36:35.42:1238,35,0	./.	1/1:7,0:7:9.47:107,9,0	1/1:2,0:22:9.52:262,10,0	0/1:11,0:11:0:0,0,0	1/1:12,18:31:12.04:456,12,0	0/0:21,0:21:33.08:0,33,697	1/1:13,12:28:15.05:615,15,0	0/0:13,0:13:11.72:0,12,278
chr10	38104822	.	T	TTTC	4291.17	PASS	AB=1.000;AC=32;AF=0.571;AN=56;BaseQRankSum=-11.088;DP=591;FS=1.614;HRun=0;HaplotypeScore=109.3623;InbreedingCoeff=0.8224;MQ=72.41;MQ0=6;MQRankSum=4.342;QD=12.37;ReadPosRankSum=-0.277;VQSLOD=4.2261;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:21:3.04:3,0,293	1/1:9,0:9:16.54:136,17,0	0/0:33,0:19:17.56:0,18,134	0/0:18,0:15:13.38:0,13,136	0/0:38,0:38:99:0,101,1315	1/1:22,0:22:40.86:353,41,0	1/1:18,0:18:20.44:159,20,0	1/1:45,0:43:81.52:789,82,0	0/0:16,0:16:47.17:0,47,596	1/1:23,0:23:64.32:538,64,0	1/1:21,0:20:17.79:288,18,0	1/1:13,0:13:11.98:100,12,0	0/0:25,0:25:64.57:0,65,780	0/0:19,0:19:53.24:0,53,676	0/0:18,0:18:53.65:0,54,809	0/0:24,0:24:70.78:0,71,997	0/0:30,0:30:81.25:0,81,1006	1/1:21,1:22:3.15:243,3,0	1/1:22,0:21:35.37:338,35,0	1/1:22,1:23:58.12:477,58,0	1/1:14,0:14:17.47:142,17,0	0/0:19,0:19:51.07:0,51,748	1/1:16,2:18:23.77:245,24,0	1/1:9,0:8:8.98:78,9,0	1/1:17,0:18:22.46:190,22,0	0/1:24,0:23:9.31:9,0,461	1/1:23,1:24:9.17:203,9,0	0/0:4,0:4:7.51:0,8,47
chr10	38104823	.	T	TTC	6127.53	PASS	AB=0.776;AC=30;AF=0.536;AN=56;BaseQRankSum=-14.513;DP=603;FS=2.076;HRun=0;HaplotypeScore=95.8539;InbreedingCoeff=0.8578;MQ=72.05;MQ0=6;MQRankSum=3.864;QD=18.29;ReadPosRankSum=0.653;VQSLOD=4.8830;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:21:32.80:0,33,327	1/1:1,7:9:17.63:238,18,0	0/0:35,0:19:23.10:0,23,176	0/0:19,0:15:23.70:0,24,197	0/0:38,0:38:99:0,108,1317	1/1:8,18:26:41.70:577,42,0	1/1:4,15:19:20.79:261,21,0	1/1:14,33:45:85.44:935,85,0	0/0:16,0:16:48.06:0,48,593	1/1:4,21:25:65.65:755,66,0	1/1:2,17:21:27.74:474,28,0	1/1:2,10:13:12.01:177,12,0	0/0:24,0:24:66.05:0,66,771	0/0:19,0:19:56.84:0,57,670	0/0:18,0:18:54.13:0,54,756	0/0:25,0:25:71.52:0,72,943	0/0:29,0:29:86.71:0,87,1027	0/1:7,15:22:0.19:352,0,0	1/1:5,15:20:47.36:506,47,0	1/1:2,20:22:59.55:649,60,0	1/1:3,11:14:17.87:244,18,0	0/0:19,0:19:56.73:0,57,719	1/1:6,12:19:14.67:223,15,0	1/1:3,6:8:9.01:134,9,0	1/1:7,12:20:23.60:258,24,0	0/1:22,1:22:43.79:44,0,500	1/1:4,20:24:12.35:301,12,0	0/0:4,0:4:7.54:0,8,52
chr10	38104824	.	T	TC	2895.58	PASS	AB=0.956;AC=26;AF=0.464;AN=56;BaseQRankSum=-7.352;DP=591;FS=6.979;HRun=0;HaplotypeScore=90.8080;InbreedingCoeff=0.7344;MQ=72.91;MQ0=6;MQRankSum=4.709;QD=9.72;ReadPosRankSum=1.501;VQSLOD=3.7695;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:21:17.42:0,17,347	1/1:8,1:9:17.59:116,18,0	0/0:35,0:19:16.34:0,16,151	0/0:20,0:15:3.43:0,3,172	0/0:39,0:39:99:0,114,1326	1/1:22,3:25:41.11:287,41,0	1/1:17,1:18:20.30:142,20,0	1/1:42,1:41:11.20:520,11,0	0/0:16,0:16:48.13:0,48,597	1/1:25,1:26:57.62:467,58,0	0/1:21,1:21:1:197,0,1	0/1:13,0:13:2.22:51,0,2	0/0:23,0:23:68.88:0,69,771	0/0:19,0:19:57.10:0,57,668	0/0:18,0:18:54.16:0,54,705	0/0:26,0:26:74.23:0,74,912	0/0:29,0:29:86.77:0,87,1017	0/1:18,2:20:3.45:145,0,3	1/1:19,0:18:16.70:236,17,0	1/1:21,1:22:51.24:348,51,0	1/1:12,1:13:17.64:125,18,0	0/0:19,0:19:57.11:0,57,690	1/1:18,1:19:1.70:98,2,0	1/1:8,0:7:8.76:51,9,0	1/1:15,3:18:23.59:193,24,0	0/0:24,0:23:16.28:0,16,559	0/1:22,1:23:3:124,0,3	0/0:3,0:3:7.81:0,8,54
chr10	38105088	.	CGAGA	C	123.86	PASS	AB=1.000;AC=8;AF=0.200;AN=40;BaseQRankSum=2.043;DP=528;FS=0.000;HRun=0;HaplotypeScore=82.0942;InbreedingCoeff=0.4722;MQ=79.81;MQ0=8;MQRankSum=1.188;QD=2.10;ReadPosRankSum=0.079;VQSLOD=1.4862;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:15:0,15,167	./.	./.	./.	0/0:11,0:11:3.01:0,3,50	0/0:15,0:15:3.46:0,3,25	0/1:13,0:13:0:0,0,0	0/0:21,0:21:3.74:0,4,9	./.	0/0:11,0:14:15.05:0,15,274	0/1:6,0:6:0:0,0,0	1/1:7,1:8:3.01:46,3,0	0/0:16,0:16:9.01:0,9,115	0/0:17,0:17:9.03:0,9,126	0/0:23,0:23:15.02:0,15,197	1/1:9,3:11:6.02:91,6,0	0/0:18,0:18:12:0,12,143	0/0:9,0:9:3.01:0,3,65	./.	0/0:21,0:21:5.89:0,6,101	0/0:30,0:30:21.05:0,21,354	0/0:21,0:21:3.01:0,3,48	./.	1/1:17,3:20:6.02:91,6,0	./.	0/0:24,0:22:12.49:0,12,167	0/0:6,0:6:3.01:0,3,66	./.
chr10	38106007	.	TTCC	T	477.68	PASS	AB=0.937;AC=13;AF=0.241;AN=54;BaseQRankSum=0.560;DP=363;FS=0.982;HRun=0;HaplotypeScore=61.6975;InbreedingCoeff=-0.0968;MQ=27.79;MQ0=61;MQRankSum=1.279;QD=3.36;ReadPosRankSum=-2.886;VQSLOD=1.1301;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:8,0:7:0.83:2,1,0	0/0:4,0:1:2.88:0,3,15	0/0:60,0:3:9.03:0,9,134	0/0:58,0:6:6.02:0,6,82	0/0:7,0:7:2.92:0,3,17	0/1:12,0:10:6.97:7,0,47	0/1:13,0:13:43.76:71,0,44	0/1:19,1:14:2.19:2,0,143	0/0:4,0:4:0.43:0,0,1	0/1:12,1:9:13.51:14,0,76	1/1:14,0:13:5.79:28,6,0	0/0:6,0:4:2.90:0,3,16	0/0:4,0:4:1.25:0,1,3	0/0:3,0:1:0:0,0,0	0/0:2,0:1:0:0,0,0	0/0:1,0:1:1.82:0,2,5	0/0:7,0:3:1.21:0,1,3	0/0:8,0:7:13.69:0,14,110	0/1:10,5:11:59.33:107,0,59	0/0:10,0:8:1.75:0,2,12	0/0:18,0:13:0.74:0,1,43	./.	0/0:12,0:11:2.46:0,2,19	0/0:9,0:9:2.13:0,2,5	0/1:12,0:10:23.81:24,0,81	0/1:19,0:17:12.43:275,0,12	0/1:9,2:11:46.65:47,0,94	0/1:4,0:4:20.85:21,0,55
chr10	38106028	.	C	CTGT	539.76	PASS	AB=0.600;AC=5;AF=0.089;AN=56;BaseQRankSum=-0.952;DP=390;FS=3.716;HRun=0;HaplotypeScore=75.5193;InbreedingCoeff=0.5156;MQ=38.46;MQ0=45;MQRankSum=0.434;QD=14.59;ReadPosRankSum=1.541;VQSLOD=3.0770;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:15:28.61:0,29,359	0/0:4,0:2:6.02:0,6,79	0/0:40,0:1:3.01:0,3,50	0/0:39,0:6:18.06:0,18,261	0/0:7,0:7:8.92:0,9,84	0/0:15,0:13:32.86:0,33,365	0/0:14,0:14:33.47:0,33,404	0/0:27,0:22:55.84:0,56,716	0/0:3,0:3:9.03:0,9,144	0/0:18,0:14:31.28:0,31,412	0/0:17,0:16:20.14:0,20,270	0/1:2,6:7:11.96:50,0,12	0/0:4,0:4:9.02:0,9,105	0/0:3,0:1:3.01:0,3,48	0/0:4,0:3:4.97:0,5,94	0/0:4,0:4:12.04:0,12,185	0/0:8,0:4:12.04:0,12,178	0/0:9,0:8:24.01:0,24,288	0/0:26,0:19:50.95:0,51,597	0/0:9,0:7:12.01:0,12,128	0/0:15,0:14:14.68:0,15,164	0/0:10,0:9:9.03:0,9,134	1/1:13,0:12:8.99:150,9,0	1/1:15,0:15:29.91:461,30,0	0/0:15,0:12:23.97:0,24,308	0/0:25,0:25:51.14:0,51,656	0/0:12,0:12:27.77:0,28,322	0/0:7,0:7:15.01:0,15,181
chr10	38108940	.	C	CGTGTGTGT	6676.96	PASS	AB=0.941;AC=45;AF=0.900;AN=50;BaseQRankSum=-1.392;DP=628;FS=3.826;HRun=0;HaplotypeScore=179.6478;InbreedingCoeff=0.1554;MQ=64.04;MQ0=6;MQRankSum=-0.658;QD=12.34;ReadPosRankSum=1.075;VQSLOD=4.0737;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:30:11.87:260,12,0	1/1:9,0:12:3.01:87,3,0	./.	./.	1/1:10,0:10:2.99:24,3,0	1/1:15,0:15:2.85:25,3,0	1/1:29,0:28:13.19:197,13,0	1/1:25,0:24:20.21:234,20,0	1/1:21,0:19:6.49:144,6,0	1/1:30,0:28:38.26:651,38,0	0/0:9,5:14:0.47:0,0,1	1/1:19,1:19:8.14:113,8,0	1/1:31,0:31:27.08:581,27,0	1/1:11,11:23:2.82:51,3,0	1/1:34,0:33:27.09:701,27,0	1/1:17,0:26:4.10:32,4,0	1/1:27,0:26:34.06:768,34,0	1/1:10,0:10:6.02:154,6,0	1/1:17,0:17:9.91:126,10,0	1/1:16,0:21:6.02:158,6,0	1/1:27,0:27:6.34:128,6,0	1/1:18,0:18:14.09:189,14,0	0/0:9,4:13:0.29:0,0,1	0/1:30,1:32:6.27:180,0,6	1/1:27,0:25:14.90:367,15,0	1/1:25,0:23:43.03:1073,43,0	1/1:17,10:25:15.52:435,16,0	./.
chr10	38108978	.	T	TGAGAGAGA	2942.71	PASS	AB=0.841;AC=43;AF=0.827;AN=52;BaseQRankSum=1.080;DP=542;FS=6.853;HRun=0;HaplotypeScore=157.3347;InbreedingCoeff=0.0962;MQ=41.82;MQ0=10;MQRankSum=0.258;QD=5.62;ReadPosRankSum=-0.707;VQSLOD=1.9696;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:34,0:33:12.04:301,12,0	1/1:10,0:10:6.02:92,6,0	./.	0/0:12,0:3:6.01:0,6,63	1/1:10,0:10:3.01:34,3,0	0/1:6,0:19:0:0,0,0	1/1:23,0:21:4.40:51,4,0	1/1:25,0:25:10.80:95,11,0	1/1:6,9:13:3.48:52,3,0	1/1:26,0:23:27.82:444,28,0	0/1:14,0:13:25.71:88,0,26	1/1:16,0:15:11.91:359,12,0	1/1:21,0:21:8.20:101,8,0	1/1:24,0:23:6.02:155,6,0	0/1:13,1:33:0:0,0,0	1/1:27,0:26:11.47:258,11,0	1/1:18,5:22:2.80:77,3,0	1/1:8,0:8:8.18:51,8,0	1/1:8,0:8:6.86:81,7,0	0/1:24,0:24:38.29:38,0,90	0/1:23,0:21:63.46:131,0,63	1/1:12,0:25:3:26,3,0	1/1:11,0:10:6.02:168,6,0	1/1:30,0:28:9.01:111,9,0	0/1:13,0:20:0:0,0,0	0/1:25,0:24:60.17:60,0,228	1/1:24,0:23:20.54:291,21,0	./.
chr10	38109813	.	TA	T	637.73	PASS	AB=1.000;AC=17;AF=0.370;AN=46;BaseQRankSum=-2.837;DP=399;FS=17.436;HRun=4;HaplotypeScore=65.2103;InbreedingCoeff=0.8137;MQ=44.74;MQ0=17;MQRankSum=4.901;QD=4.28;ReadPosRankSum=-0.241;VQSLOD=-0.6751;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:7,0:6:16.94:0,17,96	0/0:34,0:6:8.09:0,8,94	0/1:21,0:4:0.62:1,0,52	1/1:28,0:28:39.90:245,40,0	0/0:18,0:14:31.53:0,32,184	0/0:17,0:16:28.66:0,29,167	0/0:20,0:17:35.03:0,35,221	1/1:15,0:11:14.95:93,15,0	0/0:18,0:17:35.10:0,35,268	0/0:20,0:18:45.95:0,46,276	./.	1/1:13,0:12:22.75:133,23,0	1/1:12,0:12:3.95:39,4,0	1/1:12,0:11:17.29:97,17,0	1/1:16,0:14:0.47:1,0,0	1/1:19,0:19:18.73:99,19,0	0/0:23,0:22:40.06:0,40,222	0/0:15,0:8:23.50:0,23,167	0/0:24,0:22:57.19:0,57,333	0/0:5,0:5:5.97:0,6,46	1/1:6,7:12:17.45:101,17,0	./.	./.	0/0:20,0:16:31.75:0,32,219	./.	0/0:22,0:22:37.09:0,37,220	0/0:1,0:1:2.98:0,3,21
chr10	38112232	.	TC	T	811.36	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=4.674;DP=666;FS=2.497;HRun=4;HaplotypeScore=66.4435;InbreedingCoeff=0.9793;MQ=79.33;MQ0=0;MQRankSum=-3.285;QD=27.98;ReadPosRankSum=2.403;VQSLOD=3.2917;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,132,1683	0/0:9,0:9:27.09:0,27,367	0/0:21,0:21:44.20:0,44,535	0/0:12,0:11:10.94:0,11,147	0/0:24,0:24:69.22:0,69,923	0/0:11,0:11:33.09:0,33,421	0/0:31,0:31:90.25:0,90,1163	0/0:40,0:40:99:0,108,1388	0/0:18,0:18:51.10:0,51,655	0/0:29,0:29:81.21:0,81,1033	0/0:15,0:15:39.12:0,39,514	0/0:36,0:36:99:0,102,1360	0/0:20,0:20:57.14:0,57,715	0/0:23,0:23:66.18:0,66,881	0/0:22,0:22:63.12:0,63,750	0/0:23,0:23:63.17:0,63,814	0/0:41,0:41:99:0,120,1588	0/0:14,0:13:42.11:0,42,538	0/0:21,0:21:57.14:0,57,706	0/0:20,0:20:59.74:0,60,727	0/0:39,0:39:99:0,114,1463	0/0:24,0:24:69.19:0,69,895	0/0:23,0:23:69.20:0,69,906	0/0:25,0:24:75.20:0,75,974	0/0:19,0:19:54.16:0,54,708	1/1:1,16:17:48.15:574,48,0	0/0:31,0:30:93.28:0,93,1233	1/1:0,12:12:30.09:359,30,0
chr10	38114401	.	ACCAACAACAG	A	18174.24	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=13.862;DP=544;FS=22.342;HRun=0;HaplotypeScore=167.1179;InbreedingCoeff=0.9604;MQ=71.41;MQ0=0;MQRankSum=-14.259;QD=50.77;ReadPosRankSum=5.616;VQSLOD=2.7821;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:51.13:0,51,2082	1/1:2,6:8:12.04:375,12,0	0/0:37,0:37:93.27:0,93,3324	0/0:26,0:26:57.19:0,57,2024	1/1:3,10:13:24.08:685,24,0	1/1:3,8:11:12.04:355,12,0	1/1:5,17:22:27.09:837,27,0	1/1:8,12:20:33.10:905,33,0	1/1:1,20:21:42.14:1288,42,0	1/1:7,12:19:33.09:913,33,0	1/1:2,10:12:21.07:654,21,0	0/0:23,0:23:66.20:0,66,2968	1/1:6,17:23:42.14:1290,42,0	1/1:3,22:25:29.89:932,30,0	1/1:1,21:22:51.18:1592,51,0	1/1:3,30:33:78.27:2395,78,0	1/1:3,16:19:27.09:837,27,0	1/1:5,9:14:12.03:375,12,0	1/1:4,9:13:26.85:634,27,0	1/1:3,12:15:30.10:886,30,0	1/1:3,14:17:6.02:186,6,0	1/1:5,7:12:18.06:561,18,0	0/0:10,0:10:15.05:0,15,564	0/0:34,0:34:96.33:0,96,4606	1/1:2,14:15:21.07:655,21,0	0/0:21,0:21:42.09:0,42,1643	1/1:1,21:23:60.21:1819,60,0	0/0:12,0:12:21.07:0,21,1040
chr10	38114661	.	G	GT	13189.09	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-10.628;DP=616;FS=2.218;HRun=7;HaplotypeScore=57.7751;InbreedingCoeff=0.9721;MQ=64.05;MQ0=3;MQRankSum=-1.310;QD=28.61;ReadPosRankSum=1.434;VQSLOD=5.6127;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,117,1113	1/1:1,8:9:18.06:217,18,0	0/0:7,0:4:12.01:0,12,111	0/0:10,0:9:17.98:0,18,164	1/1:3,38:41:99:1197,102,0	1/1:2,26:28:75.23:902,75,0	1/1:2,21:23:54.17:652,54,0	1/1:9,32:41:96.25:1122,96,0	1/1:1,21:22:48.15:580,48,0	1/1:3,22:25:63.17:738,63,0	1/1:5,19:24:51.07:596,51,0	0/0:18,0:18:45.07:0,45,435	1/1:0,20:20:48.15:580,48,0	1/1:0,13:13:33.10:399,33,0	1/1:1,26:27:75.23:906,75,0	1/1:2,11:13:24.03:270,24,0	1/1:1,12:13:27.08:326,27,0	1/1:4,16:20:42.13:507,42,0	1/1:4,15:18:45.12:523,45,0	1/1:1,24:26:72:829,72,0	1/1:1,16:17:42.13:506,42,0	1/1:2,15:17:36.07:418,36,0	0/0:16,0:16:48.04:0,48,450	0/0:12,0:12:27.04:0,27,261	1/1:1,24:24:60.18:725,60,0	0/0:31,2:33:5.59:0,6,606	1/1:3,35:38:99:1196,99,0	0/0:17,0:17:33.04:0,33,319
chr10	38115053	.	A	AGGAG	37989.04	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-15.439;DP=803;FS=0.903;HRun=0;HaplotypeScore=110.2381;InbreedingCoeff=0.9998;MQ=82.72;MQ0=0;MQRankSum=-7.253;QD=68.57;ReadPosRankSum=1.551;VQSLOD=7.1149;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,154,3018	1/1:0,12:13:35.87:995,36,0	0/0:37,0:37:99:0,111,1941	0/0:22,0:22:48.75:0,49,1113	1/1:3,24:29:63.22:1639,63,0	1/1:5,23:29:63.22:1761,63,0	1/1:3,27:35:87.30:2340,87,0	1/1:4,22:35:99:2663,102,0	1/1:3,24:31:78.27:2122,78,0	1/1:3,22:25:72.25:1970,72,0	1/1:0,19:19:51.18:1301,51,0	0/0:38,0:38:99:0,108,2018	1/1:2,23:26:72.25:1985,72,0	1/1:0,28:29:72.25:2013,72,0	1/1:3,31:38:96.26:2572,96,0	1/1:3,29:32:93.32:2535,93,0	1/1:2,25:29:72.25:2013,72,0	1/1:2,14:19:38.98:1091,39,0	1/1:4,24:35:96.31:2419,96,0	1/1:2,21:25:63.22:1656,63,0	1/1:2,23:30:66.23:1712,66,0	1/1:1,24:28:72.25:1937,72,0	0/0:28,0:28:78.25:0,78,1557	0/0:33,0:33:96.33:0,96,1907	1/1:1,19:22:54.19:1508,54,0	0/0:31,0:31:87.28:0,87,1633	1/1:1,21:24:63.22:1760,63,0	0/0:9,0:9:27.09:0,27,539
chr10	38115949	.	TA	T	2021.21	PASS	AB=0.764;AC=22;AF=0.393;AN=56;BaseQRankSum=0.859;DP=470;FS=6.274;HRun=14;HaplotypeScore=78.2821;InbreedingCoeff=0.6566;MQ=68.49;MQ0=0;MQRankSum=-2.822;QD=9.58;ReadPosRankSum=0.336;VQSLOD=2.9715;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:22:31.28:0,31,158	1/1:6,6:13:16.80:108,17,0	0/0:12,0:7:2.63:0,3,35	0/1:8,0:7:6.05:6,0,47	0/0:22,0:25:47.54:0,48,391	1/1:8,12:20:13.66:237,14,0	0/1:2,2:4:18.90:32,0,19	1/1:25,8:35:9.33:280,9,0	0/0:14,0:14:33.01:0,33,297	1/1:8,10:19:43.66:293,44,0	1/1:7,8:15:20.74:144,21,0	0/0:8,0:21:29.30:0,29,165	0/0:10,1:13:9.15:0,9,200	0/0:20,0:20:38.97:0,39,343	0/0:8,0:10:17.68:0,18,136	0/0:18,0:18:30.99:0,31,372	0/0:21,1:23:15.22:0,15,258	1/1:4,11:16:36.77:238,37,0	1/1:10,3:14:16.79:107,17,0	0/1:10,13:23:2.88:240,0,3	0/1:6,3:9:43.73:44,0,66	0/0:21,0:21:15.16:0,15,257	0/0:4,0:19:5.38:0,5,53	0/0:3,0:10:8.50:0,8,43	1/1:2,6:8:17.79:121,18,0	0/0:16,1:17:9.44:0,9,224	1/1:9,17:27:55.34:375,55,0	0/0:14,0:14:32.71:0,33,290
chr10	38115990	.	GT	G	8246.46	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=4.585;DP=448;FS=27.492;HRun=8;HaplotypeScore=58.6555;InbreedingCoeff=0.9482;MQ=74.62;MQ0=0;MQRankSum=-1.916;QD=25.45;ReadPosRankSum=3.509;VQSLOD=3.3187;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:54.11:0,54,624	1/1:1,9:10:27.04:261,27,0	0/0:13,0:13:32.64:0,33,348	0/0:9,0:8:0.67:0,1,164	1/1:2,22:24:63.05:599,63,0	1/1:2,18:20:57.02:535,57,0	1/1:0,11:11:30.05:290,30,0	1/1:3,23:26:68.88:625,69,0	1/1:0,18:18:51.08:493,51,0	1/1:1,15:16:48.08:463,48,0	1/1:1,14:15:36.05:347,36,0	0/0:14,0:14:30.09:0,30,362	1/1:2,13:15:42.06:405,42,0	1/1:1,11:12:33.05:319,33,0	1/1:0,7:7:14.97:145,15,0	1/1:0,14:14:42.07:406,42,0	1/1:2,20:22:50.98:492,51,0	1/1:1,11:12:33:309,33,0	1/1:4,11:15:33.01:306,33,0	1/1:3,20:23:60.09:579,60,0	1/1:1,12:13:33.05:319,33,0	1/1:1,10:11:27.04:261,27,0	0/0:21,0:21:37.54:0,38,482	0/0:17,0:17:42.12:0,42,507	1/1:1,11:12:33.05:319,33,0	0/0:15,0:15:10.73:0,11,407	1/1:4,24:28:81.11:777,81,0	0/0:15,0:15:33.08:0,33,385
chr10	38117496	.	AG	A	1243.63	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.480;DP=661;FS=10.321;HRun=3;HaplotypeScore=70.1890;InbreedingCoeff=0.9446;MQ=93.33;MQ0=1;MQRankSum=-4.278;QD=32.73;ReadPosRankSum=-0.962;VQSLOD=2.9071;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,38:37:99:1338,108,0	0/0:4,0:4:9.03:0,9,130	0/0:24,0:24:69.01:0,69,915	0/0:33,0:33:51.24:0,51,1066	0/0:18,0:18:42.14:0,42,603	0/0:18,0:18:51.17:0,51,733	0/0:21,0:21:60.20:0,60,863	0/0:27,0:27:78.23:0,78,1066	0/0:26,0:26:75.25:0,75,1079	0/0:16,0:16:45.14:0,45,633	0/0:17,0:17:45.15:0,45,647	0/0:30,0:30:87.29:0,87,1252	0/0:19,0:19:57.18:0,57,803	0/0:31,0:31:84.28:0,84,1198	0/0:28,0:28:81.26:0,81,1150	0/0:34,0:34:99:0,102,1451	0/0:31,0:31:84.28:0,84,1207	0/0:22,0:22:66.22:0,66,951	0/0:28,0:28:75.19:0,75,1017	0/0:13,0:13:39.12:0,39,544	0/0:44,0:44:99:0,126,1794	0/0:15,0:15:33.08:0,33,422	0/0:15,0:15:42.14:0,42,591	0/0:23,0:23:57.19:0,57,820	0/0:14,0:14:39.10:0,39,525	0/0:24,0:24:69.23:0,69,993	0/0:37,0:37:99:0,111,1531	0/0:11,0:11:33.11:0,33,475
chr10	38117610	.	AACTCAGGTCTTTTG	A	3077.50	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.223;DP=633;FS=20.331;HRun=0;HaplotypeScore=239.8352;InbreedingCoeff=0.9967;MQ=80.99;MQ0=0;MQRankSum=-8.551;QD=64.11;ReadPosRankSum=2.340;VQSLOD=1.8684;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,111,7493	0/0:16,0:16:48.16:0,48,3131	0/0:29,0:29:87.30:0,87,4580	0/0:22,0:22:63.14:0,63,3527	0/0:26,0:26:78.24:0,78,5018	0/0:26,0:26:72.25:0,72,5027	0/0:20,0:20:60.19:0,60,3778	0/0:26,0:26:78.24:0,78,4156	0/0:20,0:20:60.21:0,60,4114	0/0:23,0:23:69.24:0,69,4521	0/0:20,0:20:60.19:0,60,3868	1/1:0,15:15:30.10:1280,30,0	0/0:16,0:16:48.16:0,48,2930	0/0:24,0:24:72.23:0,72,4695	0/0:22,0:22:66.23:0,66,4338	0/0:14,0:14:36.12:0,36,2231	0/0:23,0:23:69.21:0,69,4430	0/0:22,0:22:63.22:0,63,4248	0/0:20,0:20:57.19:0,57,3494	0/0:22,0:22:66.23:0,66,3989	0/0:32,0:32:96.32:0,96,6196	0/0:29,0:29:78.27:0,78,5068	1/1:0,14:14:18.02:660,18,0	1/1:0,19:19:30.57:1280,31,0	0/0:29,0:29:81.26:0,81,5155	0/0:23,0:23:66.23:0,66,4378	0/0:27,0:27:81.28:0,81,5329	0/0:15,0:15:45.15:0,45,3182
chr10	38119225	.	TCA	T	5210.19	PASS	AB=0.972;AC=38;AF=0.679;AN=56;BaseQRankSum=-2.474;DP=701;FS=7.352;HRun=0;HaplotypeScore=183.0580;InbreedingCoeff=0.5460;MQ=58.59;MQ0=8;MQRankSum=0.132;QD=11.25;ReadPosRankSum=3.786;VQSLOD=4.1696;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:47:12:0,12,137	1/1:5,1:6:9:86,9,0	0/0:31,0:15:5.96:0,6,43	0/0:28,0:19:0.47:0,0,1	0/1:16,0:16:18.90:80,0,19	1/1:17,1:18:26.91:291,27,0	1/1:23,7:29:14:361,14,0	0/1:30,0:30:35.63:36,0,72	1/1:20,0:27:21.55:110,22,0	1/1:26,0:25:45.97:494,46,0	1/1:19,0:18:44.92:468,45,0	1/1:20,11:31:43.71:453,44,0	1/1:19,0:20:17.29:149,17,0	1/1:23,0:26:7.58:148,8,0	1/1:21,0:21:38.50:206,38,0	1/1:22,0:25:29.87:236,30,0	1/1:31,0:34:28.49:232,28,0	1/1:22,4:26:62.65:663,63,0	0/0:32,0:32:32.81:0,33,309	0/0:22,0:21:22.51:0,23,320	0/0:52,3:52:42.04:0,42,707	1/1:17,0:18:6.74:61,7,0	0/1:14,0:13:17.92:27,0,18	0/1:21,3:24:43.75:169,0,44	1/1:16,2:18:29.55:316,30,0	1/1:15,3:17:32.87:349,33,0	0/0:19,1:20:3.83:0,4,350	1/1:12,1:13:26.86:275,27,0
chr10	38119247	.	A	ACT	3686.39	PASS	AB=0.940;AC=19;AF=0.339;AN=56;BaseQRankSum=0.831;DP=772;FS=0.402;HRun=0;HaplotypeScore=218.6215;InbreedingCoeff=0.2651;MQ=48.28;MQ0=29;MQRankSum=0.460;QD=9.45;ReadPosRankSum=3.066;VQSLOD=3.0725;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:51:35.73:0,36,364	0/0:7,0:7:8.75:0,9,66	0/0:45,0:8:21.38:0,21,164	0/0:42,0:8:6.67:0,7,109	0/1:15,3:18:49.63:237,0,50	0/1:19,1:20:2.53:3,0,209	0/0:33,0:32:57.42:0,57,339	0/1:36,0:36:99:146,0,202	0/1:18,5:23:11.16:189,0,11	0/1:25,0:23:11.97:12,0,248	0/0:22,0:21:17.44:0,17,256	0/0:26,0:26:6.84:0,7,82	1/1:14,6:20:9.84:415,10,0	0/1:26,7:33:17.28:406,0,17	1/1:13,9:21:29.92:475,30,0	1/1:16,11:26:23.19:467,23,0	1/1:22,14:36:45.58:732,46,0	0/0:27,1:28:34.64:0,35,397	0/1:30,0:28:99:102,0,203	0/0:25,0:23:19.92:0,20,132	0/1:65,0:63:99:208,0,192	1/1:12,5:17:16.51:283,17,0	0/0:14,0:13:7.90:0,8,78	0/0:33,0:33:18.71:0,19,218	0/0:18,1:19:33.79:0,34,200	0/0:22,1:22:16.14:0,16,234	0/1:18,0:18:12.96:13,0,103	0/0:12,0:12:14.98:0,15,138
chr10	38119251	.	ACT	A	2250.37	PASS	AB=0.987;AC=23;AF=0.411;AN=56;BaseQRankSum=1.904;DP=781;FS=22.806;HRun=0;HaplotypeScore=214.5755;InbreedingCoeff=-0.4671;MQ=47.17;MQ0=31;MQRankSum=2.562;QD=4.14;ReadPosRankSum=9.584;VQSLOD=0.3727;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:51,0:50:62.08:62,0,226	1/1:5,0:5:6.85:23,7,0	0/1:55,0:12:5.62:6,0,102	0/0:44,1:8:15.26:0,15,138	0/1:18,0:18:26.95:27,0,165	0/1:17,0:17:57.49:79,0,57	0/1:30,0:29:50.75:51,0,156	0/0:35,0:35:90.61:0,91,728	0/1:22,0:22:62.03:78,0,62	0/1:23,1:22:84.16:85,0,84	1/1:21,0:20:0.53:80,1,0	0/1:26,0:26:43.07:192,0,43	0/1:19,0:19:87.38:157,0,87	0/1:31,0:31:99:120,0,147	0/1:22,1:22:51.81:216,0,52	0/1:26,1:26:37.45:351,0,37	0/1:31,2:33:33.47:268,0,33	0/1:28,1:29:55.11:256,0,55	0/0:34,0:31:61.86:0,62,714	0/0:24,0:22:39.61:0,40,473	0/0:68,0:66:99:0,115,1564	0/1:19,0:19:55.53:56,0,61	0/0:12,0:11:0.11:0,0,84	0/1:35,0:35:36.24:36,0,315	0/1:19,1:20:38.01:76,0,38	0/1:26,0:25:73.26:73,0,179	0/0:20,0:20:36.05:0,36,658	0/1:12,0:12:8.68:120,0,9
chr10	38119253	.	TCA	T	722.87	PASS	AB=0.976;AC=9;AF=0.161;AN=56;BaseQRankSum=6.514;DP=790;FS=5.500;HRun=0;HaplotypeScore=223.9928;InbreedingCoeff=0.0694;MQ=47.32;MQ0=33;MQRankSum=-3.377;QD=3.17;ReadPosRankSum=4.868;VQSLOD=2.1915;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:48:37.32:0,37,198	0/0:5,0:5:8.32:0,8,37	0/1:54,0:11:0.73:1,0,242	0/0:49,0:10:23.68:0,24,297	0/0:19,0:19:25.87:0,26,246	0/0:17,0:17:33.01:0,33,273	0/0:30,0:29:54.63:0,55,438	0/0:35,0:35:77.19:0,77,805	0/0:21,0:21:1.54:0,2,146	0/0:25,0:23:43.61:0,44,468	0/0:20,0:19:38.80:0,39,214	1/1:13,11:25:12.40:450,12,0	0/1:19,0:19:40.52:41,0,189	0/1:30,0:30:2.07:2,0,230	0/1:24,0:23:30.13:30,0,135	0/1:26,0:25:99:143,0,100	0/0:36,0:36:14.13:0,14,216	0/0:29,0:29:28.72:0,29,351	0/0:34,0:30:67.72:0,68,692	0/0:24,0:22:23.52:0,24,258	0/0:72,0:70:99:0,118,1254	0/0:18,0:18:16.02:0,16,143	0/1:11,0:11:31.73:38,0,32	0/1:34,3:37:99:151,0,144	0/0:21,0:21:26.51:0,27,225	0/0:26,0:25:58.63:0,59,427	0/0:20,0:20:43.58:0,44,461	0/0:12,0:12:11.60:0,12,110
chr10	38119255	.	ACACT	A	4709.96	PASS	AB=0.959;AC=32;AF=0.571;AN=56;BaseQRankSum=-1.172;DP=791;FS=24.934;HRun=0;HaplotypeScore=228.7293;InbreedingCoeff=-0.1019;MQ=47.58;MQ0=32;MQRankSum=2.870;QD=7.51;ReadPosRankSum=3.099;VQSLOD=2.5598;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:51,0:50:40.61:41,0,204	0/0:4,0:4:4.26:0,4,13	0/0:59,0:13:14.48:0,14,380	0/0:48,0:10:8.09:0,8,340	1/1:18,3:21:5.82:261,6,0	0/1:17,1:18:98.52:99,0,105	0/1:29,0:28:99:141,0,222	0/1:34,0:34:60.85:61,0,421	1/1:18,4:22:2.47:183,2,0	0/1:25,0:23:57.39:57,0,184	0/1:20,0:19:5.89:6,0,154	1/1:25,0:25:50.83:671,51,0	1/1:11,8:19:20.92:396,21,0	0/1:23,7:30:43.47:336,0,43	1/1:16,9:24:20.55:394,21,0	1/1:16,11:26:36.70:465,37,0	0/1:24,13:37:32:502,0,32	0/1:28,1:29:99:150,0,137	0/0:33,0:29:8.87:0,9,384	0/1:23,0:22:21.15:21,0,190	0/1:69,0:67:38.82:39,0,891	1/1:13,5:18:11.93:190,12,0	1/1:10,0:9:6.52:49,7,0	1/1:36,0:36:31.04:225,31,0	0/1:21,0:21:80.61:148,0,81	0/1:25,1:25:99:245,0,139	0/0:20,0:20:19.57:0,20,383	0/1:12,0:12:32.44:32,0,33
chr10	38119259	.	T	TCA	9832.47	PASS	AB=0.932;AC=42;AF=0.750;AN=56;BaseQRankSum=-7.925;DP=804;FS=22.829;HRun=0;HaplotypeScore=192.2534;InbreedingCoeff=0.2132;MQ=48.20;MQ0=32;MQRankSum=2.251;QD=14.52;ReadPosRankSum=1.052;VQSLOD=2.7875;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:46:30.35:0,30,150	1/1:3,1:4:6.02:78,6,0	0/0:62,0:15:9.41:0,9,294	0/1:51,0:12:4.28:4,0,202	1/1:9,8:18:29.77:427,30,0	1/1:17,2:19:2.93:514,3,0	1/1:25,6:30:8.42:603,8,0	0/1:37,0:37:57.85:58,0,137	0/1:14,7:21:9.07:354,0,9	1/1:24,2:24:42.06:595,42,0	0/1:19,1:19:11.99:309,0,12	1/1:16,0:26:44.93:440,45,0	1/1:12,7:19:42.07:614,42,0	1/1:17,12:29:1.46:488,1,0	1/1:16,10:25:36.08:550,36,0	1/1:17,9:25:42.14:642,42,0	0/1:26,12:39:14.20:734,0,14	1/1:24,3:27:46.12:803,46,0	0/1:33,0:29:18.67:19,0,159	0/1:23,0:22:28.22:28,0,84	0/1:75,0:74:12.25:12,0,438	1/1:12,8:20:24.08:368,24,0	1/1:12,0:11:12.03:135,12,0	1/1:36,0:38:48.13:536,48,0	1/1:15,5:20:21.87:418,22,0	1/1:18,8:25:51.13:770,51,0	0/0:18,0:18:39.81:0,40,267	1/1:10,1:11:24.07:334,24,0
chr10	38119261	.	A	ACT	5260.56	PASS	AB=1.000;AC=25;AF=0.446;AN=56;BaseQRankSum=-2.425;DP=818;FS=17.331;HRun=0;HaplotypeScore=210.6448;InbreedingCoeff=-0.0977;MQ=48.54;MQ0=30;MQRankSum=4.173;QD=11.29;ReadPosRankSum=9.996;VQSLOD=2.8138;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:47:17.90:0,18,188	1/1:4,0:4:5.93:40,6,0	0/0:65,0:17:24.91:0,25,493	0/0:50,0:12:28.07:0,28,343	0/1:17,0:17:18.34:158,0,18	0/1:19,0:19:53.51:210,0,54	0/1:34,0:33:99:229,0,157	0/0:39,0:39:98.47:0,98,881	0/1:21,0:21:43.51:165,0,44	0/1:27,0:25:99:163,0,161	0/1:20,0:19:99:118,0,154	1/1:17,10:27:41.21:732,41,0	0/1:19,0:19:9.81:265,0,10	0/1:30,0:30:99:210,0,119	0/1:26,0:26:31.41:226,0,31	0/1:26,0:25:2.15:302,0,2	0/1:39,0:39:99:305,0,134	0/1:28,0:28:99:324,0,124	0/0:35,0:31:73.20:0,73,834	0/0:22,0:22:35.73:0,36,384	0/0:75,0:74:99:0,151,1716	1/1:20,0:20:2.77:145,3,0	1/1:5,7:11:9.83:228,10,0	1/1:13,26:39:43.69:904,44,0	0/1:20,0:20:65.20:164,0,65	0/1:25,0:24:56.29:266,0,56	0/0:18,0:18:48.11:0,48,609	0/1:13,0:13:62.70:107,0,63
chr10	38119965	.	TC	T	8279.64	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-8.425;DP=495;FS=31.036;HRun=7;HaplotypeScore=66.1539;InbreedingCoeff=0.9773;MQ=78.42;MQ0=0;MQRankSum=-0.970;QD=26.12;ReadPosRankSum=3.069;VQSLOD=3.0978;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,25:26:60.10:602,60,0	1/1:1,7:8:18.04:184,18,0	0/0:17,0:17:27.73:0,28,441	0/0:20,0:17:5.77:0,6,180	1/1:2,20:22:59.94:565,60,0	1/1:1,18:19:54.12:551,54,0	1/1:0,7:7:21.05:214,21,0	0/0:5,0:22:54.95:0,55,308	1/1:2,11:13:30.06:306,30,0	1/1:1,14:15:42.09:428,42,0	1/1:1,19:20:54.04:529,54,0	0/0:19,0:19:57.18:0,57,716	1/1:2,16:18:45.06:449,45,0	1/1:2,15:17:42.09:428,42,0	1/1:0,18:18:48.11:490,48,0	1/1:2,10:12:30.06:306,30,0	1/1:0,28:28:78.18:795,78,0	1/1:0,19:19:54.12:551,54,0	0/0:0,0:18:51.47:0,51,268	0/0:0,0:20:56.88:0,57,288	0/0:1,0:7:14.24:0,14,73	1/1:2,16:18:48.07:478,48,0	0/0:23,0:23:63.20:0,63,790	0/0:9,0:9:18.06:0,18,224	1/1:2,23:25:57.13:581,57,0	1/1:2,18:20:54.12:550,54,0	0/0:2,0:22:54.16:0,54,285	1/1:3,9:12:27.06:275,27,0
chr10	38120175	.	AGT	A	1678.20	PASS	AB=0.852;AC=19;AF=0.352;AN=54;BaseQRankSum=-1.755;DP=641;FS=12.456;HRun=0;HaplotypeScore=155.8773;InbreedingCoeff=0.6153;MQ=59.85;MQ0=7;MQRankSum=5.469;QD=8.35;ReadPosRankSum=1.727;VQSLOD=2.9872;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:26:2.74:0,3,12	1/1:2,3:5:8.99:88,9,0	./.	0/0:32,0:18:3:0,3,25	0/0:9,0:16:5.83:0,6,35	1/1:7,5:13:20.70:197,21,0	0/1:15,11:26:21.72:212,0,22	0/1:25,1:26:18.75:19,0,147	0/0:17,0:25:14.99:0,15,143	1/1:12,4:16:15.51:168,16,0	1/1:13,7:20:21.06:236,21,0	0/0:33,0:37:12.03:0,12,145	0/0:17,0:19:9.46:0,9,77	0/0:15,0:25:14.36:0,14,127	0/0:21,0:33:8.99:0,9,75	0/0:10,0:24:16.39:0,16,135	0/0:20,0:23:12.47:0,12,122	1/1:8,16:26:41.78:433,42,0	0/0:20,0:18:15.04:0,15,206	0/0:22,0:22:42.09:0,42,576	0/0:47,1:49:35.45:0,35,925	0/0:7,0:15:10.30:0,10,68	0/0:8,0:17:14.50:0,15,127	0/0:24,0:24:11.40:0,11,91	1/1:8,6:15:9.03:101,9,0	1/1:13,8:21:28.68:286,29,0	0/1:21,3:24:27.94:28,0,441	1/1:3,6:9:9.03:101,9,0
chr10	38122356	.	G	GCT	26432.98	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-0.287;DP=763;FS=1.592;HRun=0;HaplotypeScore=116.7866;InbreedingCoeff=0.9999;MQ=82.42;MQ0=0;MQRankSum=-6.350;QD=53.73;ReadPosRankSum=1.728;VQSLOD=4.9724;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,52:55:99:3155,157,0	1/1:1,17:18:48.13:920,48,0	0/0:28,0:28:81.26:0,81,1265	0/0:18,0:18:51.14:0,51,800	0/0:29,0:29:78.27:0,78,1263	1/1:1,19:21:57.20:1099,57,0	1/1:0,26:27:69.24:1332,69,0	1/1:1,37:40:99:2267,117,0	0/0:29,0:29:84.27:0,84,1344	1/1:0,22:22:66.23:1270,66,0	1/1:0,14:15:39.13:755,39,0	1/1:0,24:24:69.24:1336,69,0	0/0:20,0:20:60.20:0,60,958	0/0:31,0:31:87.27:0,87,1367	0/0:39,0:39:99:0,114,1827	0/0:34,0:33:99:0,99,1581	0/0:18,0:18:51.17:0,51,826	1/1:1,19:20:60.14:1116,60,0	1/1:6,23:30:87.24:1685,87,0	1/1:4,24:29:78.25:1548,78,0	1/1:1,48:50:99:2853,141,0	0/0:25,0:25:69.24:0,69,1114	1/1:1,21:24:57.20:1101,57,0	1/1:3,29:33:71.72:1358,72,0	1/1:0,17:18:54.18:1022,54,0	1/1:1,27:29:84.29:1590,84,0	1/1:5,21:26:72.22:1389,72,0	1/1:0,11:11:33.11:637,33,0
chr10	38122440	.	A	AG	34026.38	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-7.296;DP=806;FS=4.757;HRun=1;HaplotypeScore=96.2557;InbreedingCoeff=0.9998;MQ=74.42;MQ0=0;MQRankSum=-8.383;QD=43.91;ReadPosRankSum=6.301;VQSLOD=3.9432;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,54:56:99:2590,166,0	1/1:2,12:14:42.14:671,42,0	0/0:19,0:19:50.14:0,50,628	0/0:12,0:12:32.99:0,33,362	1/1:1,36:37:99:1583,99,0	1/1:0,22:22:60.20:959,60,0	1/1:0,32:32:84.29:1342,84,0	1/1:0,40:40:99:1850,120,0	1/1:1,30:31:84.29:1343,84,0	1/1:0,33:33:96.33:1535,96,0	1/1:3,15:18:51.16:788,51,0	1/1:3,31:34:96.33:1504,96,0	1/1:2,27:29:69.24:1102,69,0	1/1:2,31:33:90.31:1439,90,0	1/1:1,43:44:99:1871,117,0	1/1:0,31:30:90.31:1439,90,0	1/1:0,27:27:72.25:1151,72,0	1/1:0,25:25:75.26:1199,75,0	1/1:2,16:18:51.17:794,51,0	1/1:4,29:33:75.26:1197,75,0	1/1:4,39:43:99:1905,120,0	1/1:1,32:33:90.31:1439,90,0	1/1:3,17:20:57.19:908,57,0	1/1:0,37:37:96.33:1534,96,0	1/1:0,23:23:57.19:911,57,0	1/1:2,20:22:66.23:1054,66,0	1/1:0,26:26:78.27:1247,78,0	1/1:0,14:14:42.14:671,42,0
chr10	38122778	.	CG	C	13473.27	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=18.597;DP=822;FS=5.682;HRun=4;HaplotypeScore=110.3589;InbreedingCoeff=0.9999;MQ=90.57;MQ0=0;MQRankSum=-3.889;QD=30.55;ReadPosRankSum=2.778;VQSLOD=4.5095;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,46:46:99:1472,122,0	0/0:10,0:10:30.09:0,30,400	0/0:35,0:35:94.05:0,94,1200	0/0:29,0:29:77.60:0,78,930	1/1:4,28:32:72.15:832,72,0	0/0:25,0:25:75.24:0,75,1027	0/0:16,0:16:48.11:0,48,631	1/1:2,34:36:99:1188,102,0	1/1:1,23:24:54.17:645,54,0	0/0:31,0:31:84.20:0,84,1104	0/0:27,0:27:78.24:0,78,1052	0/0:31,0:31:84.28:0,84,1174	1/1:1,23:24:54.17:647,54,0	1/1:0,22:22:60.18:719,60,0	1/1:1,38:39:99:1292,108,0	1/1:2,36:38:99:1258,105,0	1/1:3,32:35:87.27:1042,87,0	0/0:27,0:27:81.25:0,81,1114	1/1:3,10:13:30.03:332,30,0	1/1:1,26:27:71.96:815,72,0	1/1:3,42:45:99:1365,114,0	1/1:0,23:23:60.18:717,60,0	0/0:28,0:28:78.26:0,78,1086	0/0:43,0:43:99:0,123,1698	0/0:26,0:26:72.24:0,72,1006	0/0:38,0:38:99:0,111,1551	1/1:2,35:37:96.29:1149,96,0	0/0:14,0:14:42.14:0,42,586
chr10	38127105	.	AC	A	7607.60	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=12.953;DP=702;FS=1.390;HRun=1;HaplotypeScore=70.4006;InbreedingCoeff=0.9992;MQ=78.98;MQ0=0;MQRankSum=-1.716;QD=39.21;ReadPosRankSum=4.733;VQSLOD=5.4100;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,120,1841	0/0:16,0:16:48.14:0,48,740	0/0:22,0:22:66.13:0,66,961	0/0:22,0:22:62.80:0,63,944	1/1:0,27:27:78.18:1065,78,0	0/0:24,0:24:72.24:0,72,1137	0/0:39,0:39:99:0,117,1821	0/0:34,0:34:99:0,102,1567	1/1:0,21:21:54.18:754,54,0	0/0:26,0:26:75.26:0,75,1198	0/0:20,0:20:60.20:0,60,958	0/0:30,0:30:87.30:0,87,1383	1/1:0,31:31:90.25:1258,90,0	1/1:0,23:23:69.23:965,69,0	1/1:0,27:27:78.26:1090,78,0	1/1:0,20:20:51.17:713,51,0	1/1:1,33:34:93.31:1300,93,0	0/0:26,0:26:78.21:0,78,1214	0/0:21,0:21:63.21:0,63,986	0/0:23,0:23:66.12:0,66,977	0/0:51,0:50:99:0,147,2347	1/1:0,11:11:33.11:461,33,0	0/0:20,0:20:60.20:0,60,959	0/0:35,0:35:99:0,102,1620	0/0:24,0:24:72.25:0,72,1151	0/0:18,0:18:54.18:0,54,843	0/0:10,0:10:30.06:0,30,431	0/0:7,0:7:21.07:0,21,335
chr10	38127617	.	AACACAC	A	2554.24	PASS	AC=14;AF=0.269;AN=52;BaseQRankSum=-0.383;DP=933;FS=2.467;HRun=0;HaplotypeScore=296.9795;InbreedingCoeff=0.8945;MQ=54.55;MQ0=37;MQRankSum=-3.736;QD=11.94;ReadPosRankSum=2.209;VQSLOD=2.4677;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:61:96.71:0,97,2143	0/0:10,0:9:7.43:0,7,56	0/0:68,0:22:27.38:0,27,447	0/0:84,0:40:10.22:0,10,786	1/1:11,18:28:12.03:172,12,0	0/0:16,0:23:35.24:0,35,318	0/0:29,0:34:48.07:0,48,356	0/0:26,0:48:99:0,101,1659	1/1:14,12:25:14.98:220,15,0	0/0:29,0:29:66.21:0,66,861	0/0:22,0:21:32.18:0,32,281	0/0:12,0:30:13.83:0,14,201	1/1:19,14:34:55.97:964,56,0	1/1:15,18:33:14.84:281,15,0	1/1:12,24:37:11.76:179,12,0	1/1:10,15:26:33.05:555,33,0	1/1:15,11:28:23.24:370,23,0	0/0:19,0:24:49.32:0,49,705	0/0:14,0:17:27.08:0,27,519	0/0:5,0:15:27.09:0,27,616	0/0:24,0:64:99:0,114,2713	./.	./.	0/0:12,0:42:3.87:0,4,25	0/0:15,0:20:18.20:0,18,134	0/0:33,0:38:82.75:0,83,1000	0/0:7,0:19:45.03:0,45,1073	0/0:3,0:3:3.01:0,3,60
chr10	38127652	.	T	TCAGA	5012.59	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=0.685;DP=954;FS=1.553;HRun=0;HaplotypeScore=271.0406;InbreedingCoeff=0.9513;MQ=56.37;MQ0=25;MQRankSum=-0.535;QD=19.28;ReadPosRankSum=2.030;VQSLOD=3.9368;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:61,0:60:95.93:0,96,1482	0/0:7,0:7:11.28:0,11,198	0/0:92,0:42:29.32:0,29,821	0/0:122,0:51:44.21:0,44,847	1/1:5,27:36:5.39:145,5,0	0/0:22,0:22:23.99:0,24,365	0/0:29,0:29:44.89:0,45,696	0/0:38,0:38:75.21:0,75,1101	1/1:7,22:31:14.93:312,15,0	0/0:34,0:32:86.89:0,87,1285	0/0:13,0:12:21.07:0,21,346	0/0:26,0:26:24.62:0,25,375	1/1:16,17:33:66.03:1335,66,0	1/1:14,16:31:33.03:699,33,0	1/1:19,21:40:36.11:836,36,0	1/1:6,23:29:27.02:570,27,0	1/1:8,19:29:24.01:522,24,0	0/0:22,0:21:51.07:0,51,770	0/0:18,0:18:36.11:0,36,545	0/0:22,0:21:36.11:0,36,568	0/0:56,0:54:87.29:0,87,1374	1/1:16,15:31:27.08:593,27,0	0/0:17,0:17:24.08:0,24,393	0/0:39,0:38:26.92:0,27,441	0/0:18,0:18:33.11:0,33,543	0/0:30,0:30:68:0,68,944	0/0:24,0:24:54.17:0,54,865	0/0:2,0:2:6.02:0,6,99
chr10	38127749	.	GCACACA	G	6339.27	PASS	AB=0.610;AC=27;AF=0.482;AN=56;BaseQRankSum=4.488;DP=604;FS=15.767;HRun=0;HaplotypeScore=187.1735;InbreedingCoeff=0.8705;MQ=51.34;MQ0=8;MQRankSum=-11.315;QD=20.92;ReadPosRankSum=-6.139;VQSLOD=1.8829;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:30:24.03:330,24,0	0/0:7,0:7:18.02:0,18,410	0/0:27,0:14:6.02:0,6,140	0/0:38,0:15:9.03:0,9,131	1/1:9,8:19:18.06:330,18,0	0/0:18,0:18:27.09:0,27,709	0/0:26,0:26:42.10:0,42,981	1/1:21,0:28:17.82:189,18,0	1/1:7,15:23:45.15:921,45,0	0/0:23,0:22:42.14:0,42,1054	0/0:12,0:12:24.07:0,24,567	0/0:24,0:24:42.14:0,42,1146	1/1:8,8:16:18.06:376,18,0	1/1:13,15:28:36.12:733,36,0	1/1:6,13:18:36.12:753,36,0	1/1:14,7:20:21.06:400,21,0	1/1:7,7:15:24.08:469,24,0	0/0:12,0:12:15.05:0,15,401	1/1:9,0:10:3.01:42,3,0	1/1:9,0:22:33.11:457,33,0	1/1:12,0:23:14.33:198,14,0	0/1:9,14:25:10.31:559,0,10	0/0:19,0:19:26.58:0,27,650	0/0:38,0:38:59.66:0,60,1494	0/0:22,0:22:36.49:0,36,1015	0/0:21,0:21:47.63:0,48,1117	1/1:8,0:24:9.78:581,10,0	0/0:13,0:13:27.02:0,27,589
chr10	38127810	.	A	AC	864.66	PASS	AB=0.797;AC=27;AF=0.482;AN=56;BaseQRankSum=-2.520;DP=421;FS=1.554;HRun=10;HaplotypeScore=87.8698;InbreedingCoeff=0.0374;MQ=75.57;MQ0=0;MQRankSum=-0.671;QD=3.24;ReadPosRankSum=-0.887;VQSLOD=-0.0105;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:14.89:0,15,115	0/1:4,4:8:48.57:49,0,51	0/0:25,0:23:31.57:0,32,213	0/1:16,0:17:7.03:7,0,69	0/1:10,4:14:12.41:54,0,12	1/1:4,2:6:3.48:33,3,0	0/1:8,15:23:15.60:55,0,16	0/0:21,0:24:30.04:0,30,212	0/1:13,0:13:18.59:26,0,19	1/1:11,7:18:14.63:136,15,0	1/1:2,3:5:3.96:61,4,0	0/1:4,0:13:0:0,0,0	0/1:10,3:13:18.61:26,0,19	0/0:14,0:14:8.91:0,9,73	0/1:22,1:23:18.22:126,0,18	0/1:2,6:8:5.97:84,0,6	1/1:15,2:17:8.68:76,9,0	0/1:6,0:6:23.02:23,0,40	0/0:6,0:7:11.01:0,11,77	0/0:14,0:14:23.96:0,24,197	0/0:28,0:29:43.91:0,44,339	0/1:14,4:19:34.84:96,0,35	1/1:4,0:12:3.59:27,4,0	1/1:12,0:12:8.92:62,9,0	0/1:10,4:14:23.04:23,0,40	1/1:11,6:17:5.93:49,6,0	0/0:24,0:26:51.84:0,52,384	0/1:5,2:7:17.69:26,0,18
chr10	38129219	.	CTGAG	C	2548.06	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=2.612;DP=640;FS=16.725;HRun=0;HaplotypeScore=122.4680;InbreedingCoeff=0.1807;MQ=58.47;MQ0=27;MQRankSum=2.422;QD=10.03;ReadPosRankSum=-2.851;VQSLOD=1.3813;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,11:32:3.39:0,3,364	0/1:5,0:5:13.39:49,0,13	0/0:51,0:22:18.87:0,19,307	0/0:50,0:17:1.60:0,2,116	0/0:20,0:20:24.29:0,24,468	0/1:14,0:13:26.06:95,0,26	0/1:28,0:28:0.83:274,0,1	0/0:34,0:32:92.89:0,93,832	0/0:24,0:23:29.74:0,30,494	0/1:24,0:24:43.53:383,0,44	0/1:9,0:9:10.60:121,0,11	0/1:35,0:35:99:324,0,137	0/0:24,0:24:48.04:0,48,821	0/0:16,0:15:35.30:0,35,366	0/0:23,0:23:20.56:0,21,425	0/0:29,0:28:25.82:0,26,588	0/1:15,0:14:19.99:20,0,294	0/1:21,0:19:8.25:277,0,8	0/0:19,0:19:15.59:0,16,620	0/0:11,0:11:23.89:0,24,209	0/0:27,0:24:29.65:0,30,490	0/0:15,0:14:20.96:0,21,207	1/1:16,0:15:7.44:136,7,0	1/1:32,0:31:6.78:301,7,0	1/1:19,0:17:25.68:242,26,0	0/1:23,0:22:28.66:314,0,29	0/0:11,0:11:7.88:0,8,269	1/1:13,0:12:1.23:178,1,0
chr10	38129220	.	T	TGAGA	1652.28	PASS	AC=44;AF=0.880;AN=50;BaseQRankSum=-0.925;DP=669;FS=19.391;HRun=0;HaplotypeScore=139.6887;InbreedingCoeff=0.3690;MQ=57.33;MQ0=27;MQRankSum=-0.751;QD=3.49;ReadPosRankSum=0.451;VQSLOD=1.5085;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:35:6.45:0,6,50	1/1:5,0:5:3.01:38,3,0	./.	./.	1/1:20,0:20:6:61,6,0	1/1:14,0:13:5.51:50,6,0	1/1:29,0:29:5.96:43,6,0	1/1:38,0:36:6.43:46,6,0	1/1:26,0:25:5.69:56,6,0	1/1:25,0:25:16.43:148,16,0	1/1:10,0:10:5.96:43,6,0	1/1:36,0:36:11.34:175,11,0	1/1:22,2:24:2.55:237,3,0	1/1:14,2:17:5.75:82,6,0	0/0:19,4:24:3.90:0,4,48	1/1:28,0:29:0.47:2,0,0	1/1:17,0:15:16.43:180,16,0	1/1:21,0:19:10.82:105,11,0	1/1:24,0:24:17.72:189,18,0	1/1:12,0:12:2.99:24,3,0	1/1:29,0:26:7.81:61,8,0	./.	1/1:17,0:16:3.01:32,3,0	1/1:32,0:31:7.48:47,7,0	0/0:20,0:18:2.78:0,3,21	1/1:21,0:20:1.08:31,1,0	1/1:12,0:12:9.02:117,9,0	1/1:13,0:12:0.94:1,1,0
chr10	38129577	.	AT	A	2739.84	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=7.614;DP=519;FS=10.057;HRun=9;HaplotypeScore=54.0915;InbreedingCoeff=0.9427;MQ=71.29;MQ0=0;MQRankSum=0.927;QD=21.57;ReadPosRankSum=-0.711;VQSLOD=3.7327;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,40:40:99:961,105,0	0/0:10,0:10:27.01:0,27,295	0/0:11,0:11:9.60:0,10,129	0/0:5,0:4:5.61:0,6,45	0/0:25,0:25:63.18:0,63,717	0/0:15,0:15:36.11:0,36,415	0/0:13,0:13:27.07:0,27,302	1/1:3,24:27:66:597,66,0	0/0:19,0:19:54.15:0,54,612	0/0:19,0:19:48.14:0,48,554	0/0:17,1:18:14.65:0,15,413	0/0:17,0:17:51.14:0,51,576	0/0:16,0:16:33.10:0,33,380	0/0:16,0:16:36.11:0,36,415	0/0:21,0:21:54.15:0,54,615	0/0:11,0:11:33.10:0,33,381	0/0:32,0:32:90.27:0,90,1039	0/0:22,0:22:66.20:0,66,762	1/1:4,9:13:26.98:242,27,0	1/1:2,16:18:45.02:412,45,0	1/1:0,13:13:39.02:357,39,0	0/0:20,0:20:54.16:0,54,623	0/0:17,0:17:48.01:0,48,520	0/0:30,0:30:81.16:0,81,887	0/0:28,0:28:78.16:0,78,883	0/0:22,1:23:41.74:0,42,734	1/1:1,15:16:39.02:357,39,0	0/0:4,0:4:5.95:0,6,52
chr10	38129824	.	G	GA	6511.34	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-9.296;DP=515;FS=3.087;HRun=5;HaplotypeScore=57.0444;InbreedingCoeff=0.9964;MQ=83.49;MQ0=0;MQRankSum=-1.925;QD=32.89;ReadPosRankSum=1.404;VQSLOD=5.5172;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:72.18:0,72,774	1/1:0,8:8:24.08:316,24,0	0/0:15,0:15:14.84:0,15,246	0/0:18,0:17:41.59:0,42,423	0/0:16,0:15:42.10:0,42,451	1/1:0,21:21:57.19:750,57,0	1/1:0,15:15:45.15:592,45,0	0/0:27,0:27:66.16:0,66,709	0/0:18,0:18:51.13:0,51,548	1/1:2,19:21:57.19:749,57,0	1/1:2,23:25:60.11:750,60,0	1/1:1,12:13:30.10:395,30,0	0/0:20,0:20:57.14:0,57,612	0/0:17,0:17:45.11:0,45,484	0/0:18,0:18:51.13:0,51,548	0/0:29,0:29:81.20:0,81,871	0/0:24,0:24:69.15:0,69,731	1/1:3,16:19:45.15:592,45,0	0/0:29,0:29:72.15:0,72,759	0/0:21,0:21:51.12:0,51,548	0/0:9,0:9:27.07:0,27,290	0/0:8,0:8:21.05:0,21,226	1/1:3,13:16:36.12:474,36,0	1/1:2,16:17:39.13:513,39,0	1/1:0,14:14:39.13:513,39,0	1/1:4,14:18:39.13:513,39,0	0/0:19,0:18:54.12:0,54,571	1/1:0,10:10:27.09:355,27,0
chr10	38130559	.	TCACATGGCTGCAGGGA	T	9964.76	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=14.237;DP=696;FS=0.880;HRun=0;HaplotypeScore=298.3950;InbreedingCoeff=0.9986;MQ=92.06;MQ0=0;MQRankSum=-11.679;QD=77.25;ReadPosRankSum=0.269;VQSLOD=3.6336;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,29:30:45.15:2022,45,0	0/0:11,0:11:33.11:0,33,2373	0/0:33,0:34:96.33:0,96,5822	0/0:28,0:28:78.27:0,78,3775	0/0:15,0:15:42.14:0,42,2960	0/0:13,0:13:39.13:0,39,2817	0/0:44,0:44:99:0,132,8795	1/1:2,17:19:48.15:1471,48,0	0/0:34,0:34:99:0,102,7877	0/0:23,0:23:66.22:0,66,4330	0/0:16,0:16:42.14:0,42,2728	0/0:38,0:38:99:0,108,8114	0/0:23,0:23:69.24:0,69,5090	0/0:43,0:43:99:0,126,9286	0/0:37,0:37:99:0,111,7883	0/0:26,0:26:75.22:0,75,4625	0/0:33,0:33:96.33:0,96,6890	0/0:22,0:22:66.21:0,66,4624	1/1:0,20:20:60.17:1645,60,0	1/1:1,10:11:21.03:868,21,0	1/1:0,25:25:23.98:1124,24,0	0/0:29,0:29:87.25:0,87,5153	0/0:13,0:13:33.11:0,33,2418	0/0:28,0:28:81.28:0,81,5497	0/0:16,0:16:48.16:0,48,3373	0/0:29,0:29:81.26:0,81,5589	1/1:1,23:23:60.21:2834,60,0	0/0:12,0:12:36.12:0,36,2117
chr10	38131046	.	ACAGTGAGG	A	8185.14	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=12.450;DP=588;FS=11.093;HRun=0;HaplotypeScore=177.6371;InbreedingCoeff=0.9938;MQ=98.65;MQ0=1;MQRankSum=-15.344;QD=44.24;ReadPosRankSum=-3.318;VQSLOD=3.3629;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:90.31:0,90,3710	1/1:1,6:7:18.06:274,18,0	0/0:37,0:37:93.32:0,93,3662	0/0:36,0:34:78.23:0,78,3096	0/0:31,0:31:84.25:0,84,3241	1/1:3,10:13:24.08:500,24,0	1/1:5,21:26:48.16:997,48,0	0/0:25,0:25:57.19:0,57,2341	0/0:23,0:23:66.18:0,66,2723	1/1:4,12:16:36.12:976,36,0	1/1:2,11:13:27.09:487,27,0	1/1:2,10:12:33.11:682,33,0	0/0:29,0:29:81.71:0,82,3286	0/0:20,0:20:60.16:0,60,2437	0/0:26,0:26:69.22:0,69,2768	0/0:14,0:14:36.08:0,36,1443	0/0:32,0:31:90.31:0,90,3877	1/1:2,16:18:33.11:853,33,0	0/0:15,0:14:39.12:0,39,1388	0/0:20,0:20:45.14:0,45,1777	0/0:27,0:26:62.93:0,63,2290	0/0:22,0:22:57.19:0,57,2350	1/1:5,17:22:39.13:527,39,0	1/1:3,14:17:27.09:643,27,0	1/1:3,17:20:45.15:872,45,0	1/1:3,12:15:39.13:1050,39,0	0/0:12,0:11:33.11:0,33,1315	1/1:2,4:6:12.04:325,12,0
chr10	38131088	.	GGTGTGTGT	G	3435.77	PASS	AC=16;AF=0.308;AN=52;BaseQRankSum=1.184;DP=633;FS=0.615;HRun=0;HaplotypeScore=213.2684;InbreedingCoeff=0.7885;MQ=54.84;MQ0=17;MQRankSum=-5.055;QD=18.37;ReadPosRankSum=5.181;VQSLOD=2.6167;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:39:8.99:0,9,133	0/0:10,0:10:9.03:0,9,127	./.	./.	1/1:15,10:23:0.29:213,0,0	0/0:12,0:12:11.25:0,11,299	0/0:28,0:28:21:0,21,509	0/0:36,0:36:45.15:0,45,1260	1/1:8,12:20:26.60:678,27,0	0/0:29,0:26:63.21:0,63,1910	0/0:23,0:23:4.29:0,4,108	0/0:21,0:21:22.73:0,23,661	1/1:16,14:30:32.50:774,32,0	1/1:13,7:22:15.01:302,15,0	1/1:16,6:23:9.71:298,10,0	1/1:5,15:20:30.01:643,30,0	1/1:20,6:26:11.93:282,12,0	0/0:16,0:16:24.08:0,24,632	0/0:23,0:22:21.03:0,21,372	0/0:16,0:21:15.25:0,15,354	0/0:29,0:27:12.04:0,12,359	1/1:12,8:20:12:246,12,0	0/0:19,0:18:9:0,9,274	0/0:23,0:24:2.92:0,3,146	0/0:16,0:18:9.03:0,9,241	0/0:22,0:20:36.12:0,36,972	0/0:14,0:13:9.03:0,9,211	0/0:5,0:5:3.01:0,3,103
chr10	38131089	.	G	GTGTGTGTGTA	6511.86	PASS	AB=1.000;AC=26;AF=0.464;AN=56;BaseQRankSum=3.331;DP=656;FS=3.812;HRun=0;HaplotypeScore=261.4074;InbreedingCoeff=0.3731;MQ=54.13;MQ0=17;MQRankSum=-7.774;QD=16.65;ReadPosRankSum=-5.504;VQSLOD=2.4831;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:41,0:40:99:324,0,218	1/1:8,2:10:8.77:323,9,0	0/0:27,0:9:20.95:0,21,176	0/0:28,0:14:15.04:0,15,167	0/0:25,0:23:47.65:0,48,429	1/1:17,0:17:20.74:692,21,0	1/1:32,2:34:35.21:670,35,0	0/1:36,0:36:99:335,0,491	0/0:20,0:20:42.02:0,42,755	1/1:33,0:30:73.35:993,73,0	1/1:24,2:26:3.23:100,3,0	0/1:20,0:19:33.38:187,0,33	0/0:30,0:30:65.55:0,66,953	0/0:22,0:22:29.50:0,29,432	0/0:22,0:22:44.47:0,44,546	0/0:20,0:20:36.06:0,36,665	0/0:27,0:26:32.29:0,32,437	1/1:16,0:16:41.65:452,42,0	0/0:24,0:23:40.51:0,41,342	0/1:21,0:21:99:211,0,137	0/1:29,0:27:67.13:67,0,157	0/0:20,0:20:35.27:0,35,417	0/1:19,0:18:32.39:151,0,32	0/1:23,0:23:23.92:118,0,24	1/1:22,0:23:18.53:717,19,0	1/1:22,1:21:50.41:967,50,0	0/1:14,0:13:32.38:32,0,141	1/1:1,4:6:5.97:173,6,0
chr10	38131711	.	TG	T	6445.66	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=11.892;DP=765;FS=8.012;HRun=2;HaplotypeScore=75.2443;InbreedingCoeff=0.9995;MQ=87.97;MQ0=0;MQRankSum=-8.002;QD=35.22;ReadPosRankSum=0.083;VQSLOD=4.8734;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,44:45:99:1588,123,0	0/0:13,0:13:36.11:0,36,520	0/0:26,0:27:68.40:0,68,1042	0/0:30,0:30:81.16:0,81,1082	0/0:31,0:31:87.23:0,87,1235	0/0:24,0:24:69.23:0,69,1034	0/0:43,0:43:99:0,123,1821	1/1:1,35:36:99:1262,102,0	0/0:33,0:33:99:0,99,1439	0/0:32,0:32:93.31:0,93,1370	0/0:20,0:20:57.13:0,57,778	0/0:25,0:25:72.24:0,72,1077	0/0:30,0:30:84.27:0,84,1238	0/0:31,0:31:93.29:0,93,1341	0/0:30,0:30:87.22:0,87,1237	0/0:23,0:23:69.21:0,69,992	0/0:40,0:40:99:0,114,1704	0/0:17,0:17:48.16:0,48,719	1/1:1,14:15:42.12:526,42,0	1/1:0,24:24:69.22:890,69,0	1/1:0,39:39:99:1324,102,0	0/0:21,0:21:63.21:0,63,938	0/0:16,0:16:42.13:0,42,599	0/0:36,0:36:99:0,108,1557	0/0:21,0:21:63.21:0,63,944	0/0:31,0:31:93.31:0,93,1386	1/1:0,24:24:66.21:856,66,0	0/0:8,0:8:24.08:0,24,359
chr10	38132460	.	CCAAGGT	C	2665.61	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.661;DP=737;FS=1.308;HRun=0;HaplotypeScore=148.5995;InbreedingCoeff=0.9771;MQ=83.66;MQ0=0;MQRankSum=-10.291;QD=46.77;ReadPosRankSum=0.480;VQSLOD=3.5029;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,163,5909	0/0:15,0:15:42.14:0,42,1538	0/0:25,0:25:75.25:0,75,2498	0/0:21,0:21:57.09:0,57,1570	0/0:32,0:32:96.33:0,96,3387	0/0:18,0:18:54.19:0,54,1926	0/0:28,0:28:84.29:0,84,2991	0/0:28,0:28:81.26:0,81,2735	0/0:29,0:29:87.28:0,87,3042	0/0:30,0:30:90.31:0,90,3207	0/0:26,0:26:78.27:0,78,2818	1/1:2,23:25:60.21:1476,60,0	0/0:35,0:35:99:0,102,3721	0/0:24,0:24:72.25:0,72,2565	0/0:35,0:35:99:0,105,3807	0/0:33,0:33:99:0,99,3579	0/0:34,0:34:99:0,102,3738	0/0:13,0:13:39.13:0,39,1429	0/0:23,0:23:66.23:0,66,2289	0/0:18,0:18:51.15:0,51,1729	0/0:35,0:35:99:0,105,3710	0/0:28,0:28:84.29:0,84,2975	1/1:1,21:22:45.15:1106,45,0	1/1:3,7:10:8.71:221,9,0	0/0:31,0:30:93.31:0,93,3140	0/0:26,0:26:75.25:0,75,2658	0/0:29,0:29:84.29:0,84,3063	0/0:9,0:9:27.09:0,27,989
chr10	38132896	.	T	TG	13117.88	PASS	AB=1.000;AC=25;AF=0.446;AN=56;BaseQRankSum=-15.910;DP=730;FS=0.000;HRun=0;HaplotypeScore=66.6774;InbreedingCoeff=0.9285;MQ=69.65;MQ0=0;MQRankSum=0.003;QD=42.18;ReadPosRankSum=0.954;VQSLOD=5.3810;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,129,1784	1/1:0,13:13:39.13:624,39,0	0/1:8,0:8:8.80:9,0,230	0/0:7,0:7:9.48:0,9,107	0/0:24,0:24:69.20:0,69,919	1/1:0,17:17:51.17:815,51,0	1/1:1,28:29:72.25:1150,72,0	0/0:39,0:39:99:0,114,1534	0/0:21,0:21:60.19:0,60,824	1/1:0,32:32:96.27:1439,96,0	1/1:0,26:26:54.18:863,54,0	1/1:0,40:40:99:1724,108,0	0/0:22,0:22:63.19:0,63,846	0/0:26,0:26:75.24:0,75,1034	0/0:39,0:39:99:0,114,1558	0/0:19,0:18:57.19:0,57,797	0/0:37,0:37:99:0,108,1510	1/1:2,22:24:24.25:965,24,0	0/0:24,0:24:72.22:0,72,975	0/0:28,0:28:84.26:0,84,1128	0/0:30,0:30:90.27:0,90,1225	0/0:33,0:33:96.27:0,96,1275	1/1:1,23:24:63.13:1007,63,0	1/1:0,37:37:99:1677,105,0	1/1:0,17:17:48.16:767,48,0	1/1:0,32:32:96.31:1503,96,0	0/0:24,0:24:69.23:0,69,965	1/1:0,12:12:36.12:575,36,0
chr10	38133321	.	AGGGTTTACG	A	9623.03	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=15.119;DP=653;FS=0.000;HRun=0;HaplotypeScore=188.8668;InbreedingCoeff=0.9892;MQ=85.19;MQ0=0;MQRankSum=-15.544;QD=56.94;ReadPosRankSum=2.213;VQSLOD=4.5761;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,120,5133	0/0:9,0:9:24.08:0,24,1157	0/0:22,0:23:55.68:0,56,2349	0/0:25,0:25:56.80:0,57,2058	1/1:2,16:18:24.08:711,24,0	0/0:21,0:21:63.18:0,63,2640	0/0:27,0:27:78.27:0,78,3494	0/0:18,0:18:48.16:0,48,2116	1/1:2,19:21:42.14:1272,42,0	0/0:23,0:23:69.24:0,69,3029	0/0:14,0:14:42.10:0,42,1813	0/0:25,0:25:69.24:0,69,2830	1/1:1,23:24:44.94:1361,45,0	1/1:1,13:14:36.12:1090,36,0	1/1:1,18:19:42.14:1260,42,0	1/1:4,28:32:78.27:2340,78,0	1/1:5,13:18:27.09:789,27,0	0/0:20,0:20:57.20:0,57,2594	0/0:32,0:32:87.29:0,87,3658	0/0:26,0:26:78.27:0,78,3559	0/0:58,0:58:99:0,163,7505	1/1:3,20:23:27.09:801,27,0	0/0:22,0:22:63.17:0,63,2656	0/0:27,0:27:72.25:0,72,3257	0/0:14,0:14:39.13:0,39,1775	0/0:31,0:31:93.32:0,93,3874	0/0:21,0:21:63.22:0,63,2898	0/0:3,0:3:9.03:0,9,420
chr10	38133963	.	AAAAC	A	8534.17	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=3.463;DP=753;FS=5.633;HRun=0;HaplotypeScore=141.7612;InbreedingCoeff=0.9983;MQ=61.06;MQ0=4;MQRankSum=-1.866;QD=32.20;ReadPosRankSum=4.234;VQSLOD=4.6424;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,111,2563	1/1:2,10:12:27.05:405,27,0	0/0:32,0:26:47.68:0,48,978	0/0:29,0:28:66.08:0,66,1362	0/0:29,0:29:60.18:0,60,1341	1/1:4,17:21:45.15:750,45,0	1/1:7,23:30:48.08:740,48,0	0/0:29,0:29:60.21:0,60,1384	0/0:27,0:27:63.22:0,63,1478	1/1:3,23:26:63.22:1049,63,0	1/1:4,17:20:39.06:591,39,0	1/1:5,21:26:66.23:1100,66,0	0/0:28,0:28:69.24:0,69,1610	0/0:34,0:34:75.26:0,75,1750	0/0:35,0:35:90.31:0,90,2062	0/0:32,0:32:69.24:0,69,1701	0/0:47,0:47:99:0,117,2698	1/1:3,24:27:60.21:1000,60,0	0/0:14,0:14:33.11:0,33,731	0/0:27,0:27:66.18:0,66,1404	0/0:26,0:26:72.08:0,72,1719	0/0:26,0:26:57.20:0,57,1297	1/1:9,14:22:24.43:400,24,0	1/1:6,17:23:42.14:700,42,0	1/1:2,17:18:30.10:500,30,0	1/1:3,24:26:66.14:1002,66,0	0/0:28,0:28:72.23:0,72,1564	1/1:1,9:10:18.06:300,18,0
chr10	38134215	.	G	GAACACACACACACACACACA	14639.95	PASS	AB=0.979;AC=50;AF=0.893;AN=56;BaseQRankSum=2.777;DP=620;FS=15.613;HRun=0;HaplotypeScore=300.4634;InbreedingCoeff=0.5158;MQ=60.19;MQ0=3;MQRankSum=-7.000;QD=27.31;ReadPosRankSum=5.038;VQSLOD=1.7404;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:26:9.03:484,9,0	1/1:8,0:8:3.01:265,3,0	0/0:45,0:35:72.16:0,72,2091	0/0:39,0:26:33.47:0,33,1011	0/1:22,0:23:53.69:205,0,54	1/1:10,0:10:9.03:741,9,0	1/1:20,0:20:12.04:201,12,0	1/1:31,0:28:48.16:1001,48,0	1/1:27,0:27:44.45:439,44,0	1/1:17,0:17:15.02:545,15,0	0/1:8,0:8:0:0,0,0	1/1:24,0:24:9.03:484,9,0	1/1:34,0:34:38.96:665,39,0	1/1:22,0:22:18.25:231,18,0	1/1:26,0:26:27.05:412,27,0	1/1:22,0:22:41.65:457,42,0	1/1:16,0:16:26.82:322,27,0	1/1:22,0:22:18.06:1576,18,0	1/1:22,0:21:45.15:1419,45,0	1/1:11,0:11:12.04:696,12,0	1/1:16,0:16:3.48:39,3,0	1/1:42,0:42:55.40:542,55,0	1/1:14,0:14:11.20:680,11,0	1/1:29,0:28:6.02:326,6,0	1/1:7,11:18:3.01:264,3,0	1/1:21,0:21:33.11:1374,33,0	1/1:20,0:20:9.50:482,10,0	1/1:7,0:7:9.03:791,9,0
chr10	38134216	.	A	AACACACAC	28536.48	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=1.057;DP=849;FS=6.504;HRun=0;HaplotypeScore=293.4224;InbreedingCoeff=0.8108;MQ=52.49;MQ0=4;MQRankSum=-7.935;QD=37.30;ReadPosRankSum=3.683;VQSLOD=3.8009;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:40:15.05:498,15,0	1/1:4,0:12:12.04:407,12,0	0/0:44,0:34:72.22:0,72,1619	0/0:40,0:27:38.86:0,39,863	1/1:6,16:27:39.12:1405,39,0	1/1:8,0:17:18.06:497,18,0	1/1:32,0:32:27.56:554,28,0	1/1:46,0:41:64.48:1421,64,0	1/1:9,23:34:51.16:2071,51,0	1/1:21,0:33:60.17:1831,60,0	1/1:18,0:17:6.01:76,6,0	1/1:12,0:32:12.04:398,12,0	1/1:11,26:39:72.24:2789,72,0	1/1:9,17:28:54.19:2154,54,0	1/1:12,20:38:57.20:2329,57,0	1/1:7,17:27:48.16:1922,48,0	1/1:9,10:19:21.07:790,21,0	1/1:16,0:31:33.11:1074,33,0	1/1:18,0:33:72.14:1663,72,0	1/1:14,0:25:18.06:561,18,0	1/1:28,0:28:6.02:128,6,0	1/1:13,32:45:60.21:2481,60,0	1/1:8,0:19:11.17:372,11,0	1/1:13,0:41:10.25:174,10,0	1/1:22,0:23:12.04:277,12,0	1/1:16,0:31:51.17:1176,51,0	1/1:22,0:31:33.11:979,33,0	1/1:5,0:10:15.05:508,15,0
chr10	38134873	.	T	TA	3830.26	PASS	AB=0.744;AC=12;AF=0.214;AN=56;BaseQRankSum=-10.935;DP=640;FS=4.616;HRun=8;HaplotypeScore=59.3712;InbreedingCoeff=0.8114;MQ=74.00;MQ0=0;MQRankSum=0.754;QD=22.40;ReadPosRankSum=0.313;VQSLOD=4.1824;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,31:32:87.26:1004,87,0	0/0:8,0:8:21.01:0,21,192	0/0:11,0:11:8.96:0,9,76	0/0:11,0:10:18:0,18,161	0/0:38,0:38:90.02:0,90,819	0/0:26,0:26:75.03:0,75,686	0/0:26,0:26:69.03:0,69,632	1/1:6,18:24:51.15:589,51,0	0/0:22,0:22:59.99:0,60,539	0/0:18,0:19:50.05:0,50,445	0/0:22,0:22:66.03:0,66,600	0/0:28,0:28:75.04:0,75,686	0/0:37,0:38:98.09:0,98,885	0/0:29,0:29:72.03:0,72,659	0/0:25,0:25:69.03:0,69,631	0/0:16,0:16:42.01:0,42,384	0/0:33,0:33:84.01:0,84,764	0/1:23,2:25:3.20:3,0,483	1/1:8,16:24:48.10:531,48,0	1/1:4,20:24:57.06:615,57,0	0/1:4,14:18:12.77:373,0,13	0/0:18,0:18:54.03:0,54,493	0/0:18,0:18:48.03:0,48,439	0/0:21,0:21:57.01:0,57,517	0/0:21,0:21:60.03:0,60,549	0/0:27,0:27:66.03:0,66,604	1/1:3,21:23:63.17:715,63,0	0/0:12,0:12:30:0,30,274
chr10	38135109	.	T	TG	20745.38	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-8.776;DP=689;FS=0.000;HRun=6;HaplotypeScore=64.3897;InbreedingCoeff=0.9972;MQ=78.10;MQ0=0;MQRankSum=-9.443;QD=31.92;ReadPosRankSum=4.944;VQSLOD=4.7884;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,48:52:99:1698,135,0	1/1:0,10:10:27.09:340,27,0	0/0:19,0:17:45.03:0,45,435	0/0:20,0:20:47.08:0,47,480	1/1:0,24:25:75.17:922,75,0	1/1:4,17:21:48.15:604,48,0	1/1:3,28:31:75.24:944,75,0	1/1:1,17:18:51.15:629,51,0	1/1:2,22:24:66.21:830,66,0	1/1:3,26:29:75.24:943,75,0	1/1:1,12:13:33.02:393,33,0	1/1:2,26:29:63.20:789,63,0	1/1:3,18:21:48.15:604,48,0	1/1:0,24:24:69.22:868,69,0	1/1:2,30:32:81.26:1019,81,0	1/1:2,21:23:57.18:717,57,0	1/1:2,30:31:81.26:1019,81,0	1/1:2,20:22:60.19:753,60,0	1/1:5,19:24:61.68:713,62,0	1/1:1,15:16:48.14:588,48,0	1/1:8,46:54:99:1671,135,0	1/1:2,22:24:60.02:703,60,0	1/1:3,17:20:42.05:507,42,0	1/1:1,28:29:78.25:981,78,0	1/1:4,20:24:51.16:642,51,0	1/1:2,27:29:84.26:1040,84,0	1/1:0,17:17:45.14:566,45,0	1/1:0,7:7:21.07:264,21,0
chr10	38135738	.	CAT	C	1061.87	PASS	AB=0.939;AC=8;AF=0.143;AN=56;BaseQRankSum=2.337;DP=467;FS=3.376;HRun=0;HaplotypeScore=81.9825;InbreedingCoeff=0.7108;MQ=80.74;MQ0=2;MQRankSum=-2.060;QD=15.39;ReadPosRankSum=2.789;VQSLOD=3.5888;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:54.18:0,54,905	0/0:6,0:6:9.03:0,9,152	0/0:22,0:21:42.77:0,43,607	0/0:28,0:24:41.81:0,42,655	0/0:14,0:14:36.10:0,36,573	0/0:18,0:18:21.07:0,21,354	0/0:13,0:13:30.10:0,30,505	0/0:28,0:28:63.22:0,63,1063	0/0:18,0:18:45.09:0,45,628	0/0:18,0:18:39.60:0,40,649	0/0:14,0:14:30.10:0,30,505	1/1:0,9:9:27.09:347,27,0	0/0:12,0:12:27.04:0,27,455	0/0:12,0:12:30.09:0,30,495	0/0:22,0:22:45.63:0,46,760	0/1:15,1:16:8.47:8,0,400	0/0:27,0:27:57.20:0,57,961	0/0:14,0:13:15.02:0,15,224	0/0:16,0:16:33.11:0,33,541	0/0:15,0:15:39.12:0,39,627	0/0:19,0:19:45.14:0,45,715	0/0:14,0:14:36.11:0,36,582	1/1:3,7:10:21.07:270,21,0	1/1:1,18:19:45.15:579,45,0	0/0:8,0:8:9.03:0,9,152	0/0:25,0:25:55.39:0,55,1022	0/1:14,1:15:6.24:6,0,425	0/0:12,0:12:18.53:0,19,304
chr10	38135758	.	A	AACACAC	2268.13	PASS	AB=0.911;AC=20;AF=0.357;AN=56;BaseQRankSum=1.602;DP=555;FS=0.540;HRun=0;HaplotypeScore=145.5013;InbreedingCoeff=0.6543;MQ=61.48;MQ0=15;MQRankSum=-1.729;QD=10.65;ReadPosRankSum=-3.626;VQSLOD=1.8403;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:26:23.84:0,24,466	1/1:3,7:9:8.92:268,9,0	0/1:29,0:16:17.83:18,0,107	0/0:38,0:20:17.04:0,17,264	0/0:21,0:21:38.60:0,39,652	1/1:4,14:21:18.06:462,18,0	1/1:12,2:18:26.68:358,27,0	0/0:30,0:28:30.76:0,31,645	0/0:18,0:19:36.05:0,36,620	1/1:6,9:15:21.07:439,21,0	0/1:8,8:18:7.97:110,0,8	0/1:19,0:19:49.59:50,0,123	0/0:13,0:13:26.86:0,27,474	0/0:14,0:14:26.56:0,27,453	0/0:18,0:19:36.98:0,37,582	0/0:18,0:18:38.79:0,39,615	0/0:23,0:23:42.07:0,42,751	1/1:15,1:15:8.71:116,9,0	0/0:17,0:17:20.30:0,20,286	0/0:22,0:22:23.71:0,24,350	0/0:25,0:24:8.84:0,9,248	0/0:18,0:18:30.09:0,30,495	0/1:12,0:12:2.49:2,0,134	0/0:25,0:25:24.27:0,24,382	1/1:6,8:13:5.93:116,6,0	1/1:11,0:29:46.40:409,46,0	0/0:11,0:11:6.69:0,7,286	1/1:0,0:10:9.03:117,9,0
chr10	38135778	.	TAC	T	1571.59	PASS	AB=0.898;AC=18;AF=0.321;AN=56;BaseQRankSum=-1.908;DP=596;FS=8.204;HRun=0;HaplotypeScore=109.8210;InbreedingCoeff=0.5445;MQ=52.85;MQ0=16;MQRankSum=3.167;QD=7.56;ReadPosRankSum=4.046;VQSLOD=2.3526;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:38:9.47:0,9,80	0/0:9,0:8:6:0,6,70	0/0:28,0:10:5.92:0,6,39	0/0:31,0:9:5.98:0,6,46	1/1:19,4:25:35.56:364,36,0	0/0:22,0:22:29.43:0,29,347	0/0:21,0:21:20.77:0,21,337	0/0:28,0:25:15.90:0,16,136	1/1:5,12:17:23.51:272,24,0	0/0:15,0:14:14.67:0,15,212	0/1:18,0:18:26.94:27,0,38	0/0:15,0:20:21.12:0,21,195	1/1:7,4:12:11.87:117,12,0	0/1:5,11:16:28.36:154,0,28	1/1:12,11:22:12.51:138,13,0	1/1:8,15:23:13.92:262,14,0	1/1:10,13:24:30.30:280,30,0	0/0:17,0:16:11.32:0,11,131	0/0:10,0:14:12.45:0,12,111	0/0:8,0:20:17.01:0,17,148	0/0:16,0:33:16.82:0,17,150	1/1:7,11:18:11.73:114,12,0	0/0:11,0:13:2.57:0,3,26	0/0:27,0:30:23.80:0,24,252	0/1:17,0:16:22.12:22,0,111	0/0:29,0:29:5.79:0,6,517	0/0:9,0:16:10.25:0,10,62	0/1:13,0:13:13.06:13,0,225
chr10	38135780	.	C	CACAT	1296.08	PASS	AB=0.980;AC=19;AF=0.339;AN=56;BaseQRankSum=4.675;DP=592;FS=1.094;HRun=0;HaplotypeScore=123.0757;InbreedingCoeff=-0.3696;MQ=51.62;MQ0=17;MQRankSum=0.776;QD=3.47;ReadPosRankSum=3.642;VQSLOD=2.3452;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:39,0:39:64.89:65,0,225	1/1:9,0:8:5.56:93,6,0	0/0:26,0:7:14.87:0,15,106	0/0:32,0:10:24:0,24,225	0/1:27,0:26:8.41:8,0,319	0/1:22,0:22:92.95:172,0,93	0/1:19,0:20:90.38:90,0,273	0/0:29,0:26:42.78:0,43,431	0/0:18,0:18:35.60:0,36,325	0/1:16,0:15:99:196,0,123	0/1:19,0:19:13.56:20,0,14	0/1:19,0:19:47.72:170,0,48	0/0:12,0:12:26.76:0,27,246	0/0:14,0:14:20.61:0,21,239	0/0:21,0:20:22.83:0,23,255	0/0:22,0:22:38.76:0,39,375	0/0:23,0:24:46.94:0,47,418	0/1:11,6:16:85.09:85,0,149	0/1:14,0:14:56.42:56,0,133	0/1:22,0:22:99:110,0,133	0/1:35,0:33:22.40:22,0,172	0/0:20,0:19:26.44:0,26,257	0/1:12,0:12:36.29:36,0,61	0/1:29,0:29:99:157,0,129	0/1:17,0:16:68.41:68,0,86	0/1:27,0:28:68.59:69,0,407	0/1:15,0:15:24.79:25,0,124	0/1:13,0:13:16.83:17,0,151
chr10	38136258	.	TG	T	14387.03	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=11.272;DP=675;FS=3.084;HRun=4;HaplotypeScore=70.8591;InbreedingCoeff=0.9999;MQ=91.83;MQ0=0;MQRankSum=-4.507;QD=32.48;ReadPosRankSum=3.568;VQSLOD=5.5767;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,36:38:96.29:1149,96,0	0/0:12,0:12:36.12:0,36,503	0/0:26,0:26:74.97:0,75,983	0/0:30,0:30:36.33:0,36,853	1/1:0,24:24:63.11:723,63,0	0/0:23,0:23:63.20:0,63,863	0/0:28,0:28:81.25:0,81,1100	1/1:0,29:29:87.27:1044,87,0	1/1:0,22:22:66.20:791,66,0	0/0:20,0:20:60.20:0,60,827	0/0:18,0:18:39.09:0,39,495	1/1:0,26:26:75.23:900,75,0	1/1:2,26:28:72.20:864,72,0	1/1:0,24:24:57.08:683,57,0	1/1:0,21:21:63.19:756,63,0	1/1:1,24:25:69.21:828,69,0	1/1:0,33:33:90.28:1079,90,0	0/0:27,0:27:78.26:0,78,1091	1/1:2,12:14:33.09:384,33,0	1/1:1,28:29:81.22:955,81,0	1/1:3,40:43:99:1392,117,0	1/1:1,17:18:53.99:610,54,0	1/1:1,12:13:36.11:432,36,0	1/1:2,29:31:78.24:935,78,0	0/0:15,0:15:45.15:0,45,629	0/0:19,0:19:54.17:0,54,740	1/1:1,24:25:72.22:863,72,0	0/0:14,0:14:42.14:0,42,587
chr10	38136580	.	TTTTTTTTTC	T	2546.34	PASS	AB=0.993;AC=22;AF=0.393;AN=56;BaseQRankSum=10.852;DP=590;FS=28.630;HRun=0;HaplotypeScore=185.9740;InbreedingCoeff=-0.3267;MQ=58.79;MQ0=6;MQRankSum=-8.770;QD=6.48;ReadPosRankSum=8.706;VQSLOD=0.8615;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:36,0:35:76.73:191,0,77	0/1:17,0:17:20.39:20,0,348	0/0:48,0:15:41.66:0,42,1152	0/0:41,0:21:34.57:0,35,868	0/1:29,1:30:99:242,0,137	0/0:18,0:18:37.83:0,38,469	0/0:20,0:20:42.05:0,42,627	0/1:29,0:29:51.16:266,0,51	1/1:14,0:14:1.46:123,1,0	0/0:15,0:15:39.13:0,39,680	0/1:19,0:19:2.09:2,0,626	0/1:16,0:16:7.86:8,0,189	0/1:21,0:21:49.73:147,0,50	1/1:19,1:20:47.65:415,48,0	0/1:14,0:14:41.16:118,0,41	0/1:16,0:16:17.05:181,0,17	0/1:29,0:29:91.80:195,0,92	0/0:27,0:27:60.18:0,60,1006	0/1:10,0:8:6.83:72,0,7	0/1:21,1:22:52.53:239,0,53	0/1:12,0:12:2.89:3,0,51	0/1:14,0:13:90.72:108,0,91	0/1:19,0:19:23.70:24,0,181	0/1:20,0:20:30.17:30,0,92	0/0:18,0:18:27.09:0,27,546	0/1:17,0:17:17.21:17,0,572	0/1:17,1:18:14.37:307,0,14	0/0:9,0:9:8.21:0,8,112
chr10	38136581	.	TTTTTTTTC	T	5145.34	PASS	AB=0.984;AC=29;AF=0.518;AN=56;BaseQRankSum=4.828;DP=590;FS=35.439;HRun=0;HaplotypeScore=168.2982;InbreedingCoeff=0.0622;MQ=59.11;MQ0=6;MQRankSum=-7.299;QD=12.80;ReadPosRankSum=7.429;VQSLOD=2.2721;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:36,0:35:35.29:359,0,35	0/1:17,0:17:93.72:94,0,213	0/0:48,0:15:37.47:0,37,967	0/0:43,0:22:4.98:0,5,729	0/1:30,0:30:47.08:413,0,47	0/0:18,0:18:16.73:0,17,251	0/0:20,0:20:40.26:0,40,409	1/1:27,2:29:15.18:537,15,0	1/1:14,0:14:6.03:236,6,0	0/0:14,0:14:38.96:0,39,443	0/1:19,0:19:2.20:2,0,478	0/1:16,0:16:87.29:114,0,87	1/1:21,0:21:3.21:285,3,0	1/1:19,1:20:48.14:622,48,0	0/1:15,0:15:1.62:223,0,2	1/1:16,0:16:7.43:334,7,0	0/1:28,1:29:23.52:364,0,24	0/0:27,0:27:59.95:0,60,755	1/1:10,0:8:19.40:190,19,0	1/1:20,2:22:20.08:436,20,0	0/1:10,0:10:15.32:24,0,15	0/1:12,2:13:44.52:230,0,45	0/1:19,0:19:77.46:97,0,77	0/1:19,1:20:18.90:138,0,19	0/0:18,0:18:27.03:0,27,430	0/1:17,0:17:25.08:25,0,343	1/1:18,1:19:4.20:420,4,0	0/1:9,0:9:3.65:4,0,58
chr10	38136582	.	TTTTTTTC	T	9323.48	PASS	AB=0.939;AC=36;AF=0.643;AN=56;BaseQRankSum=-2.145;DP=584;FS=33.395;HRun=0;HaplotypeScore=144.5409;InbreedingCoeff=0.3722;MQ=58.43;MQ0=6;MQRankSum=-7.605;QD=22.47;ReadPosRankSum=5.993;VQSLOD=2.4717;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,26:34:37.31:741,37,0	0/1:16,0:16:85.76:86,0,90	0/0:46,0:14:32.96:0,33,815	0/0:43,0:22:11.39:0,11,628	1/1:5,24:29:45.51:778,46,0	0/1:18,0:18:19.49:19,0,100	0/0:20,0:20:21.89:0,22,251	1/1:8,21:29:74.68:1044,75,0	1/1:2,12:14:23.97:484,24,0	0/0:13,0:13:33.67:0,34,312	0/1:20,0:20:7.50:8,0,242	0/1:15,1:16:38.74:263,0,39	1/1:4,17:21:24.03:587,24,0	1/1:3,17:20:48.16:1019,48,0	1/1:2,12:14:20.92:460,21,0	1/1:3,13:16:29.89:663,30,0	1/1:8,20:28:32.63:656,33,0	0/0:28,0:28:53.37:0,53,474	1/1:3,7:8:24.02:313,24,0	1/1:7,14:22:22.91:725,23,0	1/1:2,8:10:1.77:59,2,0	0/1:5,8:12:2.74:227,0,3	0/1:18,1:19:64.52:137,0,65	1/1:18,0:18:7.54:210,8,0	0/0:18,0:18:25.53:0,26,295	0/1:19,0:19:99:117,0,199	1/1:6,13:19:36.50:693,36,0	0/1:9,0:9:16.50:35,0,17
chr10	38136583	.	TTTTTTC	T	7836.24	PASS	AB=0.924;AC=40;AF=0.714;AN=56;BaseQRankSum=4.334;DP=560;FS=33.120;HRun=0;HaplotypeScore=136.2369;InbreedingCoeff=0.2628;MQ=58.05;MQ0=6;MQRankSum=-5.898;QD=18.53;ReadPosRankSum=8.771;VQSLOD=1.9530;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:29,2:30:38.15:582,38,0	0/1:13,0:15:45.37:126,0,45	0/0:49,0:16:40.07:0,40,700	0/0:42,0:21:20.82:0,21,509	1/1:25,0:25:47.62:562,48,0	0/1:16,1:17:12.68:115,0,13	0/1:20,0:20:35.91:36,0,71	1/1:25,2:27:66.25:815,66,0	1/1:14,0:14:24.01:360,24,0	0/1:13,0:13:21.44:21,0,84	0/1:20,0:20:55.08:55,0,107	1/1:6,9:15:26.74:509,27,0	1/1:19,0:19:27.21:423,27,0	1/1:20,0:20:48.16:700,48,0	1/1:13,0:13:21:307,21,0	1/1:14,0:14:30.04:445,30,0	1/1:25,0:25:32.90:454,33,0	0/0:28,0:28:5.14:0,5,228	1/1:10,0:8:23.86:228,24,0	1/1:20,1:21:44.71:555,45,0	1/1:8,0:8:1.94:38,2,0	0/1:12,0:12:6.07:172,0,6	0/1:4,13:18:1.18:186,0,1	1/1:4,14:18:20.92:395,21,0	0/0:18,0:18:7.33:0,7,177	0/1:19,0:19:41.23:162,0,41	1/1:18,1:19:39.03:549,39,0	1/1:9,0:9:8.45:43,8,0
chr10	38136584	.	TTTTTC	T	7460.93	PASS	AB=0.980;AC=47;AF=0.839;AN=56;BaseQRankSum=5.159;DP=547;FS=57.189;HRun=0;HaplotypeScore=126.8371;InbreedingCoeff=0.2773;MQ=58.49;MQ0=6;MQRankSum=-4.825;QD=16.43;ReadPosRankSum=8.782;VQSLOD=1.9831;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:29:38.31:482,38,0	1/1:14,1:15:2.45:195,2,0	0/0:51,0:18:44.66:0,45,649	0/0:42,0:21:15.97:0,16,414	1/1:25,0:25:47.68:504,48,0	1/1:14,2:16:26.74:263,27,0	0/1:16,2:18:25.53:144,0,26	1/1:27,0:27:71.92:726,72,0	1/1:14,0:14:24.02:299,24,0	0/1:13,0:13:46.07:104,0,46	1/1:21,0:21:9.70:172,10,0	1/1:13,0:13:26.97:340,27,0	1/1:19,0:19:28.30:352,28,0	1/1:20,0:20:48.15:607,48,0	1/1:12,0:12:21.07:266,21,0	1/1:13,0:13:30.10:386,30,0	1/1:22,0:23:33.03:396,33,0	0/1:28,0:28:84.15:115,0,84	1/1:10,0:8:23.91:218,24,0	1/1:21,0:21:44.69:480,45,0	1/1:8,0:8:2.36:33,2,0	1/1:12,0:11:14.80:165,15,0	1/1:17,0:17:12.50:149,13,0	1/1:16,0:16:21.07:266,21,0	0/1:18,0:18:38.73:39,0,81	0/1:17,0:17:6.38:222,0,6	1/1:18,0:18:38.68:450,39,0	1/1:9,0:10:11.91:90,12,0
chr10	38136585	.	TTTTC	T	7776.77	PASS	AB=0.625;AC=50;AF=0.893;AN=56;BaseQRankSum=1.360;DP=540;FS=51.471;HRun=0;HaplotypeScore=119.1750;InbreedingCoeff=0.5088;MQ=59.61;MQ0=6;MQRankSum=-3.611;QD=17.44;ReadPosRankSum=6.981;VQSLOD=2.3748;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:29:38.80:412,39,0	1/1:4,11:15:6.72:273,7,0	0/0:51,0:19:34.62:0,35,440	0/0:43,0:22:19.41:0,19,325	1/1:25,0:25:47.73:446,48,0	1/1:5,11:16:29.91:391,30,0	1/1:6,11:17:1.03:225,1,0	1/1:26,0:26:70.19:573,70,0	1/1:13,0:14:24.02:252,24,0	1/1:4,8:12:24.05:284,24,0	1/1:3,18:21:38.22:348,38,0	1/1:10,0:11:27.06:288,27,0	1/1:19,0:19:29.06:298,29,0	1/1:20,0:20:48.12:512,48,0	1/1:12,0:12:21.05:224,21,0	1/1:13,0:13:30.08:327,30,0	1/1:23,0:23:33.01:337,33,0	0/1:12,14:26:8.33:356,0,8	1/1:10,0:8:23.21:172,23,0	1/1:20,0:20:44.05:401,44,0	1/1:8,0:8:2.77:27,3,0	1/1:12,0:11:14.86:142,15,0	1/1:17,0:17:14.73:149,15,0	1/1:16,0:16:21.05:225,21,0	0/1:6,12:18:29:135,0,29	1/1:2,15:17:44.71:440,45,0	1/1:17,0:18:38.56:376,39,0	1/1:1,9:10:12.03:163,12,0
chr10	38136586	.	TTTC	T	6339.78	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=1.094;DP=533;FS=43.680;HRun=0;HaplotypeScore=119.1173;InbreedingCoeff=0.7198;MQ=62.27;MQ0=6;MQRankSum=-4.243;QD=14.44;ReadPosRankSum=6.246;VQSLOD=2.3572;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:29:38.59:343,39,0	1/1:15,0:15:26.65:207,27,0	0/0:50,0:20:40.06:0,40,422	0/0:44,0:24:0.35:0,0,242	1/1:25,0:25:47.73:388,48,0	1/1:14,1:15:30.04:291,30,0	1/1:15,1:17:20.80:192,21,0	1/1:26,0:26:66.74:484,67,0	1/1:14,0:14:23.95:206,24,0	1/1:10,0:11:26.01:194,26,0	1/1:19,2:21:38.65:327,39,0	1/1:11,0:11:26.98:235,27,0	1/1:19,0:19:28.47:237,28,0	1/1:20,0:20:47.98:420,48,0	1/1:12,0:12:20.99:184,21,0	1/1:13,0:13:30.02:269,30,0	1/1:23,0:23:32.93:280,33,0	1/1:22,2:24:27.87:296,28,0	1/1:10,0:8:21.51:147,22,0	1/1:20,0:20:42.67:336,43,0	1/1:8,0:8:2.63:22,3,0	1/1:11,0:10:14.88:118,15,0	1/1:17,0:17:14.32:126,14,0	1/1:16,0:16:20.99:184,21,0	1/1:16,1:17:11.76:124,12,0	1/1:16,0:16:42.65:333,43,0	1/1:18,0:18:35.68:296,36,0	1/1:10,0:10:11.97:104,12,0
chr10	38139106	.	CCT	C	12287.87	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-14.585;DP=748;FS=1.256;HRun=0;HaplotypeScore=124.6339;InbreedingCoeff=0.9998;MQ=82.16;MQ0=1;MQRankSum=-2.333;QD=41.37;ReadPosRankSum=5.260;VQSLOD=6.5325;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:61,0:61:99:0,184,3404	0/0:19,0:19:54.13:0,54,944	0/0:18,0:18:51.12:0,51,899	0/0:27,0:27:55.13:0,55,1276	1/1:1,15:15:30.10:487,30,0	0/0:34,0:34:99:0,102,1896	0/0:40,0:40:99:0,120,2130	0/0:24,0:24:72.24:0,72,1334	1/1:0,32:32:81.28:1309,81,0	0/0:35,0:35:99:0,102,1904	0/0:15,0:15:45.14:0,45,800	1/1:0,27:27:69.24:1119,69,0	1/1:0,29:29:78.13:1267,78,0	1/1:0,32:32:75.16:1213,75,0	1/1:0,33:33:96.33:1562,96,0	1/1:0,22:22:57.19:927,57,0	1/1:0,31:31:75.26:1219,75,0	0/0:35,0:35:99:0,102,1941	0/0:24,0:24:69.21:0,69,1217	0/0:17,0:17:48.16:0,48,927	0/0:31,0:31:93.24:0,93,1661	1/1:0,26:26:72.24:1147,72,0	1/1:0,17:17:48.16:769,48,0	1/1:0,32:32:78.27:1269,78,0	0/0:23,0:23:69.21:0,69,1250	0/0:23,0:23:66.20:0,66,1175	0/0:15,0:15:45.14:0,45,821	0/0:10,0:10:30.10:0,30,581
chr10	38139555	.	CT	C	9394.81	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=5.765;DP=595;FS=18.221;HRun=2;HaplotypeScore=58.5870;InbreedingCoeff=0.9865;MQ=47.24;MQ0=95;MQRankSum=-3.564;QD=30.70;ReadPosRankSum=-1.993;VQSLOD=2.7641;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,44:39:99:1392,108,0	1/1:0,11:11:30.10:389,30,0	0/0:13,0:3:8.62:0,9,96	0/0:13,0:7:18:0,18,212	0/0:15,0:14:33.11:0,33,494	1/1:1,23:22:63.20:817,63,0	1/1:1,13:12:33.11:428,33,0	1/1:2,24:20:54.17:688,54,0	0/0:23,0:22:39.13:0,39,583	1/1:0,19:18:54.18:699,54,0	1/1:1,10:9:18.06:233,18,0	0/0:21,0:18:42.10:0,42,604	0/0:23,0:20:42.11:0,42,604	0/0:19,0:17:35.94:0,36,514	0/0:30,0:25:38.77:0,39,559	0/0:21,0:18:38.85:0,39,582	0/0:30,0:26:48.15:0,48,699	1/1:0,14:12:33.11:428,33,0	1/1:2,9:10:27.09:350,27,0	1/1:1,18:13:39.13:506,39,0	1/1:0,32:26:75.24:973,75,0	0/0:19,0:17:39.13:0,39,584	0/0:23,0:22:51.11:0,51,764	0/0:39,0:31:69.23:0,69,1033	1/1:0,24:20:60.19:777,60,0	1/1:0,29:24:72.23:935,72,0	1/1:0,22:19:45.15:584,45,0	1/1:0,6:5:15.05:195,15,0
chr10	38140205	.	T	TAAC	24454.69	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-15.747;DP=681;FS=20.035;HRun=0;HaplotypeScore=79.7978;InbreedingCoeff=0.9999;MQ=74.55;MQ0=0;MQRankSum=-1.426;QD=54.34;ReadPosRankSum=4.302;VQSLOD=5.2230;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,28:29:78.18:1721,78,0	0/0:11,0:11:33.11:0,33,544	0/0:17,0:17:45.11:0,45,705	0/0:16,0:16:39.13:0,39,642	1/1:0,22:23:66.14:1387,66,0	0/0:17,0:17:45.14:0,45,736	0/0:24,0:24:72.22:0,72,1198	1/1:1,22:23:66.20:1451,66,0	1/1:1,35:36:87.30:2001,87,0	0/0:38,0:38:99:0,99,1622	0/0:21,0:21:63.17:0,63,985	1/1:1,17:19:36.12:828,36,0	1/1:2,24:26:60.21:1380,60,0	1/1:1,29:31:69.24:1587,69,0	1/1:1,24:27:57.20:1292,57,0	1/1:0,24:24:60.21:1367,60,0	1/1:0,22:22:51.09:1174,51,0	0/0:14,0:14:36.12:0,36,609	1/1:5,21:28:69.14:1308,69,0	1/1:0,26:27:69.07:1462,69,0	1/1:0,15:16:36.12:813,36,0	1/1:1,25:26:66.12:1463,66,0	1/1:1,28:29:63.22:1445,63,0	1/1:2,31:33:84.29:1917,84,0	0/0:32,0:32:93.25:0,93,1534	0/0:30,0:30:90.31:0,90,1519	1/1:2,28:29:81.28:1858,81,0	0/0:11,0:11:33.08:0,33,507
chr10	38140622	.	A	AAC	413.55	PASS	AB=0.930;AC=7;AF=0.125;AN=56;BaseQRankSum=3.771;DP=734;FS=28.596;HRun=0;HaplotypeScore=271.5544;InbreedingCoeff=-0.1659;MQ=56.43;MQ0=2;MQRankSum=-0.058;QD=1.86;ReadPosRankSum=1.226;VQSLOD=1.3686;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:5.93:0,6,46	0/0:8,0:8:13.53:0,14,104	0/0:37,0:27:8.11:0,8,100	0/0:43,0:27:10.89:0,11,140	0/0:51,0:51:3.49:0,3,268	0/0:21,0:20:5.72:0,6,35	0/0:30,0:29:26.99:0,27,186	0/0:25,0:24:33.43:0,33,261	0/1:27,0:27:47.03:47,0,100	0/0:20,0:20:56.01:0,56,453	0/0:10,0:10:8.02:0,8,61	0/1:21,16:36:16.22:264,0,16	0/1:31,0:31:5.48:5,0,148	0/0:35,0:35:12.41:0,12,230	0/0:30,0:30:20.80:0,21,198	0/1:20,0:21:12.82:13,0,85	0/1:34,0:34:56.54:57,0,183	0/0:9,0:8:14.88:0,15,128	0/0:26,0:25:37.98:0,38,279	0/0:13,0:14:14.70:0,15,95	0/0:24,0:24:2.84:0,3,14	0/1:36,0:36:41.50:41,0,125	0/1:30,6:35:99:111,0,261	0/0:21,3:24:15.01:0,15,160	0/0:22,0:23:9.02:0,9,95	0/0:28,0:27:63.41:0,63,525	0/0:16,0:16:29.72:0,30,220	0/0:20,0:20:20.53:0,21,232
chr10	38140631	.	ACACGCG	A	1633.43	PASS	AB=0.996;AC=20;AF=0.357;AN=56;BaseQRankSum=-0.403;DP=664;FS=1.051;HRun=0;HaplotypeScore=266.4462;InbreedingCoeff=0.3610;MQ=54.53;MQ0=4;MQRankSum=1.350;QD=6.56;ReadPosRankSum=-0.496;VQSLOD=2.4116;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:15,1:16:5.99:51,6,0	0/1:7,0:7:26.02:26,0,101	0/0:24,0:17:17.76:0,18,261	0/0:34,0:21:13.99:0,14,259	0/0:48,0:48:34.96:0,35,1093	0/1:16,0:15:8.26:68,0,8	0/1:26,0:26:61.59:62,0,120	1/1:6,13:17:41.21:442,41,0	0/0:24,0:24:31.78:0,32,754	0/1:20,0:20:86.67:87,0,240	0/1:8,0:8:13.96:58,0,14	0/0:36,0:32:34.45:0,34,674	0/0:29,0:29:27.19:0,27,583	0/0:35,0:35:35.20:0,35,610	0/0:27,0:27:22.32:0,22,372	0/0:22,0:21:16.33:0,16,405	0/0:35,0:36:63.13:0,63,1178	0/0:7,0:6:11.87:0,12,95	1/1:2,19:21:45.49:407,45,0	1/1:13,1:14:15.04:242,15,0	1/1:6,17:22:3.48:37,3,0	0/0:35,0:35:31.23:0,31,696	0/0:32,0:31:49.90:0,50,1092	0/0:24,0:22:13.43:0,13,450	0/1:20,0:20:15.97:16,0,40	0/1:25,0:24:1.45:1,0,320	1/1:13,0:13:27.52:308,28,0	0/1:20,0:20:14.93:15,0,243
chr10	38140633	.	ACGCGCG	A	1535.17	PASS	AB=0.958;AC=25;AF=0.446;AN=56;BaseQRankSum=0.406;DP=642;FS=26.957;HRun=0;HaplotypeScore=259.2827;InbreedingCoeff=0.3527;MQ=53.75;MQ0=6;MQRankSum=-1.271;QD=5.05;ReadPosRankSum=-0.262;VQSLOD=1.3005;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:16,0:16:0:3,0,0	0/1:7,0:7:23.70:97,0,24	0/1:18,0:14:1.74:2,0,46	0/1:35,0:20:5.89:6,0,38	0/0:44,0:43:29.35:0,29,780	1/1:13,3:15:6.02:121,6,0	1/1:26,1:26:13.27:144,13,0	0/1:15,0:15:4.97:164,0,5	0/0:24,0:24:25.14:0,25,653	0/1:19,0:19:7.16:299,0,7	1/1:8,0:8:6.91:115,7,0	0/0:36,0:32:21.69:0,22,630	0/0:28,0:28:23.63:0,24,525	0/0:35,0:35:13.68:0,14,362	0/0:25,0:25:6.10:0,6,189	0/0:21,0:20:15.87:0,16,331	0/0:36,0:36:45.03:0,45,916	0/1:5,0:6:9.54:21,0,10	1/1:20,0:19:2.32:106,2,0	1/1:14,0:14:11.67:136,12,0	1/1:21,0:20:3.91:21,4,0	0/0:36,0:36:17.94:0,18,523	0/0:28,0:27:31.67:0,32,833	0/0:25,0:23:12.81:0,13,356	1/1:19,0:20:3.90:53,4,0	1/1:25,0:24:6.53:187,7,0	0/1:12,0:12:2.95:100,0,3	0/1:20,0:20:22.12:137,0,22
chr10	38140637	.	G	GCA	1114.12	PASS	AB=0.784;AC=8;AF=0.143;AN=56;BaseQRankSum=1.243;DP=585;FS=6.271;HRun=0;HaplotypeScore=227.7140;InbreedingCoeff=-0.1685;MQ=49.56;MQ0=10;MQRankSum=-1.328;QD=4.68;ReadPosRankSum=1.884;VQSLOD=2.2759;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:16:0:0,0,0	0/0:6,0:6:17.62:0,18,122	0/0:13,0:9:0.41:0,0,27	0/0:26,0:13:6.06:0,6,59	0/1:25,12:36:99:257,0,160	0/0:16,0:15:5.87:0,6,35	0/0:24,0:23:2.95:0,3,76	0/0:17,0:15:29.77:0,30,294	0/1:8,10:20:84.61:233,0,85	0/0:16,0:16:47.26:0,47,374	0/0:8,0:8:8.96:0,9,73	0/1:33,0:28:23.03:23,0,24	0/1:12,13:25:99:111,0,113	0/1:27,7:34:27.19:27,0,160	0/0:9,13:22:12.01:0,12,138	0/1:20,1:20:51.42:134,0,51	0/1:20,13:33:99:253,0,217	0/0:7,0:6:13.91:0,14,117	0/0:20,0:19:32.16:0,32,262	0/0:13,0:13:11.87:0,12,95	0/0:21,0:20:2.88:0,3,15	0/1:22,12:34:85.56:206,0,86	0/0:26,0:25:34.11:0,34,331	0/0:23,0:21:15.02:0,15,178	0/0:19,0:19:6.01:0,6,71	0/0:22,0:21:49.20:0,49,402	0/0:8,0:8:17.91:0,18,152	0/0:20,0:20:52.08:0,52,332
chr10	38140645	.	G	GCACACACACA	6596.23	PASS	AB=0.922;AC=46;AF=0.821;AN=56;BaseQRankSum=1.041;DP=541;FS=0.000;HRun=0;HaplotypeScore=230.3454;InbreedingCoeff=0.2862;MQ=38.43;MQ0=12;MQRankSum=1.517;QD=13.71;ReadPosRankSum=0.828;VQSLOD=3.3650;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:21:0:0,0,0	1/1:6,0:6:9.92:264,10,0	0/1:6,0:2:2.62:3,0,79	0/0:21,0:6:0.43:0,0,2	1/1:39,0:37:14.23:296,14,0	1/1:18,0:17:1.01:3,1,0	1/1:19,0:18:3.23:91,3,0	1/1:15,0:13:26.41:287,26,0	1/1:18,0:18:19.96:419,20,0	1/1:17,0:17:28.23:670,28,0	1/1:10,0:10:2.82:50,3,0	1/1:31,0:26:23.07:442,23,0	1/1:18,0:18:14.80:390,15,0	1/1:25,0:25:2.84:97,3,0	0/1:20,0:20:0.42:0,0,1	1/1:20,0:19:5.81:148,6,0	0/1:28,2:30:36.34:516,0,36	1/1:9,0:8:13.81:318,14,0	1/1:21,0:18:27.61:464,28,0	1/1:12,0:12:2.63:13,3,0	0/0:17,0:16:0:0,0,0	1/1:37,0:37:10.88:105,11,0	1/1:22,0:21:3.98:75,4,0	0/1:14,3:19:0:0,0,0	1/1:18,0:18:4.51:16,5,0	1/1:21,0:19:23.73:522,24,0	1/1:7,0:6:6.91:149,7,0	1/1:21,0:21:41.16:1259,41,0
chr10	38140688	.	GAGAGAGAGAGAA	G	1833.11	PASS	AB=1.000;AC=36;AF=0.692;AN=52;BaseQRankSum=-1.468;DP=383;FS=15.491;HRun=0;HaplotypeScore=110.2896;InbreedingCoeff=0.3682;MQ=35.66;MQ0=22;MQRankSum=1.140;QD=7.13;ReadPosRankSum=-0.334;VQSLOD=1.3129;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:24:0:0,0,0	1/1:7,0:7:7.24:53,7,0	0/0:8,0:2:5.88:0,6,36	0/0:23,0:4:1.86:0,2,26	1/1:21,0:20:3.29:22,3,0	1/1:17,0:17:11.83:164,12,0	1/1:9,0:7:20.87:161,21,0	1/1:15,0:13:21.73:118,22,0	1/1:8,0:8:2.33:17,2,0	1/1:5,13:18:34.70:289,35,0	0/0:11,0:11:0:0,0,0	1/1:20,0:15:13.84:103,14,0	1/1:8,0:8:11.32:71,11,0	1/1:5,0:5:2.94:18,3,0	1/1:10,0:9:8.73:74,9,0	0/0:15,0:14:0.47:0,0,1	1/1:14,0:13:26.81:171,27,0	1/1:9,0:6:12.39:74,12,0	0/1:10,0:10:1.11:52,0,1	0/0:8,0:7:0:0,0,0	1/1:13,0:11:3:25,3,0	1/1:14,15:29:5.52:36,6,0	0/0:14,0:12:0.47:0,0,1	./.	./.	1/1:17,0:15:31.11:264,31,0	0/1:10,0:9:19.32:112,0,19	1/1:17,0:17:18.23:123,18,0
chr10	38140690	.	GAGAGAGAGAA	G	1990.11	PASS	AB=1.000;AC=39;AF=0.750;AN=52;BaseQRankSum=-1.062;DP=385;FS=15.204;HRun=0;HaplotypeScore=103.4657;InbreedingCoeff=0.5007;MQ=36.30;MQ0=23;MQRankSum=1.400;QD=7.06;ReadPosRankSum=0.888;VQSLOD=1.1787;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:25:0.12:0,0,0	1/1:6,0:6:7.55:53,8,0	0/0:11,0:4:7.78:0,8,49	0/0:24,0:5:3.10:0,3,28	1/1:18,0:17:3.18:22,3,0	1/1:17,0:17:11.83:166,12,0	1/1:9,0:7:20.87:161,21,0	1/1:14,0:11:19.99:118,20,0	1/1:8,0:8:2.34:17,2,0	1/1:18,0:18:34.82:273,35,0	0/0:10,0:10:0:0,0,0	1/1:20,0:15:14.16:103,14,0	1/1:9,0:9:14.31:95,14,0	1/1:5,0:5:2.94:18,3,0	1/1:10,0:9:8.73:74,9,0	0/0:1,14:14:0.47:0,0,1	1/1:14,0:13:27.34:175,27,0	1/1:9,0:6:12.92:80,13,0	1/1:9,0:9:15.62:102,16,0	0/0:8,0:7:0:0,0,0	1/1:13,0:11:2.83:25,3,0	1/1:28,1:29:6:36,6,0	0/0:14,0:12:0.47:0,0,1	./.	./.	1/1:20,0:18:39.79:313,40,0	1/1:11,0:10:10.68:144,11,0	1/1:16,0:16:18.25:124,18,0
chr10	38140692	.	GAGAGAGAA	G	2283.11	PASS	AB=0.787;AC=40;AF=0.741;AN=54;BaseQRankSum=-0.200;DP=406;FS=15.144;HRun=0;HaplotypeScore=100.7380;InbreedingCoeff=0.4980;MQ=37.10;MQ0=25;MQRankSum=1.958;QD=7.07;ReadPosRankSum=1.020;VQSLOD=1.1189;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:7,20:26:0.12:0,0,0	1/1:6,0:6:7.81:54,8,0	0/0:14,0:6:10.70:0,11,66	0/1:28,0:6:3.85:4,0,23	1/1:20,0:19:5.10:46,5,0	1/1:18,0:18:11.78:147,12,0	1/1:10,0:8:23.86:186,24,0	1/1:13,0:9:19.13:117,19,0	1/1:9,0:9:5.28:42,5,0	1/1:17,0:17:35.35:263,35,0	0/0:11,0:11:0:0,0,0	1/1:20,0:15:14.12:103,14,0	1/1:10,0:10:17.08:114,17,0	1/1:6,0:5:2.94:18,3,0	1/1:11,0:10:11.66:98,12,0	0/0:15,0:14:0.47:0,0,1	1/1:15,0:14:30.49:205,30,0	1/1:10,0:7:16.09:109,16,0	1/1:12,0:12:23.90:173,24,0	0/0:7,0:6:0:0,0,0	1/1:15,0:13:5.85:47,6,0	1/1:29,0:29:5.82:36,6,0	0/0:2,14:14:0.47:0,0,1	0/0:7,0:4:0:0,0,0	./.	1/1:22,0:20:43.31:320,43,0	1/1:11,0:10:23.74:185,24,0	1/1:14,0:14:17.78:124,18,0
chr10	38140696	.	GAGAA	G	2895.94	PASS	AB=1.000;AC=42;AF=0.808;AN=52;BaseQRankSum=-0.036;DP=428;FS=14.349;HRun=0;HaplotypeScore=87.9486;InbreedingCoeff=0.3863;MQ=41.23;MQ0=25;MQRankSum=2.374;QD=8.27;ReadPosRankSum=0.505;VQSLOD=1.3504;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:24:0.05:0,0,0	1/1:6,0:6:11.18:77,11,0	0/0:18,0:8:0.73:0,1,54	0/1:33,0:7:17.69:18,0,19	1/1:19,0:18:4.40:45,4,0	1/1:18,1:19:17.84:166,18,0	1/1:12,0:11:29.86:235,30,0	1/1:13,0:9:17:112,17,0	1/1:9,0:9:8.32:67,8,0	1/1:16,0:16:34.82:230,35,0	1/1:10,0:10:2.91:25,3,0	1/1:19,0:14:14.40:104,14,0	1/1:11,0:11:20.27:139,20,0	1/1:7,0:6:5.94:43,6,0	1/1:12,0:11:14.81:124,15,0	0/0:15,0:14:0.47:0,0,1	1/1:17,0:16:36.87:254,37,0	1/1:11,0:9:21.72:155,22,0	1/1:14,0:14:35.83:282,36,0	./.	1/1:18,0:16:8.83:69,9,0	1/1:28,0:28:6.30:37,6,0	0/0:16,0:14:0.47:0,0,1	0/0:7,0:4:0:0,0,0	./.	1/1:27,0:25:63.83:467,64,0	1/1:12,0:11:26.74:223,27,0	1/1:12,0:12:17.80:125,18,0
chr10	38140698	.	GAA	G	3174.28	PASS	AB=1.000;AC=42;AF=0.808;AN=52;BaseQRankSum=0.505;DP=433;FS=13.996;HRun=3;HaplotypeScore=79.1268;InbreedingCoeff=0.4142;MQ=42.13;MQ0=24;MQRankSum=1.823;QD=9.20;ReadPosRankSum=-0.174;VQSLOD=-0.7100;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:25:0:0,0,0	1/1:8,0:8:14.45:104,14,0	0/0:18,0:8:0.88:0,1,54	0/1:33,0:7:17.09:18,0,17	1/1:18,0:18:7.27:53,7,0	1/1:20,0:20:23.75:198,24,0	1/1:12,0:11:29.86:235,30,0	1/1:12,0:8:17.87:135,18,0	1/1:10,0:10:8.59:67,9,0	1/1:16,0:16:34.69:212,35,0	1/1:4,5:9:5.99:50,6,0	1/1:19,0:14:14.73:104,15,0	1/1:11,0:11:20.47:139,20,0	1/1:7,0:6:5.94:43,6,0	1/1:12,0:11:17.89:149,18,0	0/1:15,0:14:0:0,0,0	1/1:19,0:18:41.60:298,42,0	1/1:11,0:9:24.69:175,25,0	1/1:15,0:15:41.78:323,42,0	./.	1/1:20,0:19:11.67:94,12,0	1/1:26,0:26:6.41:38,6,0	0/0:16,0:14:0:0,0,0	0/0:7,0:4:0:0,0,0	./.	1/1:1,27:26:63.83:467,64,0	1/1:11,0:10:26.74:223,27,0	1/1:13,0:13:20.81:148,21,0
chr10	38141715	.	C	CATTGAAGAAAT	63517.14	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-4.812;DP=591;FS=8.197;HRun=0;HaplotypeScore=149.7139;InbreedingCoeff=0.8396;MQ=73.90;MQ0=0;MQRankSum=-9.668;QD=114.86;ReadPosRankSum=4.952;VQSLOD=4.8105;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,9:18:36.12:1800,36,0	1/1:3,3:8:18.06:889,18,0	0/0:24,0:25:65.03:0,65,2177	0/0:13,0:13:33.09:0,33,844	1/1:5,17:33:66.23:3316,66,0	1/1:5,18:30:69.24:3678,69,0	1/1:7,5:21:27.09:1345,27,0	1/1:15,5:38:99:4790,111,0	1/1:2,9:18:30.10:1670,30,0	1/1:4,22:33:96.26:4966,96,0	1/1:8,11:28:63.08:3017,63,0	1/1:1,8:13:24.08:1322,24,0	1/1:2,1:5:6.02:342,6,0	1/1:3,9:15:33.11:1883,33,0	1/1:3,10:18:30.10:1713,30,0	1/1:3,12:23:45.15:2497,45,0	1/1:2,9:15:27.09:1489,27,0	1/1:2,2:7:5.92:343,6,0	1/1:4,12:23:66.23:3409,66,0	1/1:10,21:39:87.30:4591,87,0	1/1:1,2:3:6.02:340,6,0	1/1:8,14:25:63.22:3309,63,0	1/1:12,9:27:48.16:2489,48,0	1/1:1,4:10:12.04:662,12,0	1/1:2,19:26:57.20:3256,57,0	1/1:9,17:32:93.32:4631,93,0	1/1:11,9:25:57.20:3082,57,0	1/1:9,10:19:51.18:2688,51,0
chr10	38145821	.	T	TC	4737.58	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-7.430;DP=526;FS=4.099;HRun=1;HaplotypeScore=55.8134;InbreedingCoeff=0.9833;MQ=60.44;MQ0=7;MQRankSum=-0.823;QD=32.90;ReadPosRankSum=-0.138;VQSLOD=4.3221;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,37:38:72.02:1265,72,0	0/0:4,0:4:12.03:0,12,143	0/0:13,0:11:26.84:0,27,282	0/0:9,0:5:10.15:0,10,98	0/0:25,0:25:69.14:0,69,833	0/0:21,0:21:54.17:0,54,686	0/0:14,0:13:36.10:0,36,442	1/1:3,25:28:72.11:926,72,0	0/0:21,0:20:60.08:0,60,716	0/0:20,0:20:60.18:0,60,750	0/0:15,0:15:42.09:0,42,513	0/0:23,0:22:63.19:0,63,789	0/0:13,0:13:39.09:0,39,449	0/0:17,0:17:28.99:0,29,515	0/0:17,0:17:48.14:0,48,594	0/0:22,0:22:66.20:0,66,823	0/0:22,0:22:63.19:0,63,798	0/0:22,0:21:60.17:0,60,756	1/1:0,13:13:39.03:495,39,0	1/1:1,25:27:60.06:802,60,0	1/1:2,10:11:24.08:345,24,0	0/0:9,0:9:24.07:0,24,288	0/0:16,0:16:45.13:0,45,555	0/0:23,0:23:66.05:0,66,794	0/0:27,0:27:77.67:0,78,935	0/0:17,0:17:51.11:0,51,617	1/1:2,24:26:63.21:905,63,0	0/0:12,0:12:35.27:0,35,411
chr10	38147245	.	C	CGT	11735.46	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=17.114;DP=647;FS=1.379;HRun=0;HaplotypeScore=96.4635;InbreedingCoeff=0.9952;MQ=87.70;MQ0=0;MQRankSum=-4.434;QD=43.79;ReadPosRankSum=3.001;VQSLOD=6.3277;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:87.28:0,87,1257	0/0:4,0:4:12.04:0,12,177	0/0:30,0:30:78.24:0,78,1087	0/0:16,0:17:47.94:0,48,583	1/1:1,11:12:24.08:428,24,0	0/0:30,0:30:84.23:0,84,1157	0/0:27,0:27:81.23:0,81,1151	0/0:39,0:39:99:0,108,1572	1/1:1,21:24:60.21:1118,60,0	0/0:28,0:28:75.25:0,75,1104	0/0:10,0:10:30.10:0,30,442	1/1:2,31:33:84.29:1571,84,0	1/1:4,17:21:48.16:858,48,0	1/1:0,26:26:60.21:1121,60,0	1/1:3,25:28:66.16:1196,66,0	1/1:2,19:22:54.19:1011,54,0	1/1:1,24:25:60.21:1123,60,0	0/0:30,0:30:84.27:0,84,1212	0/0:12,0:12:33.11:0,33,486	0/0:21,0:21:63.21:0,63,927	0/0:30,0:30:87.25:0,87,1224	1/1:1,22:24:66.23:1203,66,0	1/1:1,17:20:39.12:725,39,0	1/1:1,31:33:75.26:1383,75,0	0/0:23,0:23:66.19:0,66,949	0/0:15,0:15:42.14:0,42,618	0/0:17,0:16:45.15:0,45,663	0/0:14,0:14:42.14:0,42,618
chr10	38147802	.	TAA	T	3950.79	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-5.960;DP=512;FS=6.777;HRun=12;HaplotypeScore=86.7108;InbreedingCoeff=0.9416;MQ=76.88;MQ0=4;MQRankSum=-1.019;QD=23.80;ReadPosRankSum=6.837;VQSLOD=3.1983;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:24:41.14:0,41,361	0/0:2,0:10:15:0,15,138	0/0:30,0:14:21.39:0,21,210	0/0:48,0:19:9.17:0,9,112	1/1:4,23:26:69.03:678,69,0	0/0:2,0:15:11.13:0,11,236	0/0:4,0:12:21.04:0,21,219	0/0:6,0:20:41.29:0,41,291	1/1:3,13:17:38.82:378,39,0	0/0:9,0:23:34.26:0,34,329	0/0:7,0:30:59.95:0,60,555	1/1:1,12:13:36.08:366,36,0	1/1:3,12:15:3.32:303,3,0	1/1:0,15:15:33.07:335,33,0	1/1:2,11:13:30.06:305,30,0	1/1:3,14:17:36.07:366,36,0	1/1:0,15:15:45.10:458,45,0	0/0:0,0:7:15.02:0,15,143	0/0:9,0:15:24.01:0,24,208	0/0:1,0:22:54.30:0,54,464	0/0:3,0:6:9.01:0,9,83	1/1:0,13:13:33.03:335,33,0	1/1:2,11:13:27.06:275,27,0	1/1:1,7:8:15.03:153,15,0	0/0:7,0:23:15.85:0,16,378	0/0:5,0:20:41.89:0,42,449	0/0:5,0:28:59.44:0,59,542	0/0:7,0:11:14.99:0,15,132
chr10	38147813	.	AAG	A	691.42	PASS	AB=0.990;AC=23;AF=0.411;AN=56;BaseQRankSum=3.861;DP=531;FS=9.417;HRun=0;HaplotypeScore=102.8335;InbreedingCoeff=-0.0781;MQ=74.64;MQ0=8;MQRankSum=0.581;QD=1.89;ReadPosRankSum=3.275;VQSLOD=1.3501;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:32.92:0,33,363	0/0:10,0:10:18.64:0,19,145	0/0:40,0:14:16.54:0,17,163	0/1:58,0:25:9.35:9,0,169	1/1:25,0:24:33.88:143,34,0	0/1:14,1:15:12.84:13,0,191	0/0:12,0:12:26.92:0,27,241	0/1:25,0:25:1.05:1,0,217	1/1:15,0:15:3.61:70,4,0	0/1:20,0:20:39.45:39,0,285	0/1:28,0:28:29.56:30,0,467	1/1:13,0:13:4.85:69,5,0	0/1:15,0:15:34.04:52,0,34	0/1:18,0:18:36.84:79,0,37	0/1:12,0:12:1.03:33,0,1	0/1:16,0:16:18.91:36,0,19	1/1:15,0:15:34.81:115,35,0	0/0:13,0:13:29.92:0,30,245	0/1:12,0:11:21.88:22,0,173	0/0:23,1:24:23.76:0,24,410	0/0:8,0:8:11.92:0,12,102	0/1:14,0:14:11.23:38,0,11	0/1:13,0:13:23.18:45,0,23	0/1:8,0:8:10.84:18,0,11	0/1:19,2:21:25.85:26,0,381	0/1:22,0:22:25.13:25,0,462	0/0:31,0:31:62.54:0,63,629	0/0:5,0:5:8.89:0,9,81
chr10	38149164	.	TTG	T	137.61	PASS	AB=0.946;AC=16;AF=0.320;AN=50;BaseQRankSum=1.574;DP=352;FS=7.480;HRun=0;HaplotypeScore=108.4384;InbreedingCoeff=0.3526;MQ=33.41;MQ0=29;MQRankSum=-1.301;QD=1.16;ReadPosRankSum=1.295;VQSLOD=1.5917;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:24:2.65:16,3,0	1/1:7,0:7:2.03:10,2,0	./.	./.	0/1:6,1:7:0.01:0,0,0	0/0:15,0:13:3.05:0,3,62	0/0:22,0:19:9.93:0,10,65	0/0:16,1:14:9.80:0,10,378	0/1:8,0:6:2.71:3,0,11	0/0:20,0:18:35.29:0,35,369	0/0:13,0:12:3.91:0,4,22	1/1:11,1:12:6.53:22,7,0	1/1:6,1:8:8.37:61,8,0	./.	1/1:12,0:13:5.80:34,6,0	0/1:11,0:13:7.83:19,0,8	1/1:14,0:12:2.71:87,3,0	0/1:9,1:10:19.17:19,0,124	0/0:11,0:11:3.84:0,4,221	0/0:6,1:6:3.52:0,4,38	0/0:12,3:11:9.50:0,10,120	0/0:13,0:11:1.13:0,1,3	0/0:4,1:4:0.47:0,0,1	0/0:11,0:12:0.47:0,0,1	0/0:17,0:15:6.77:0,7,58	0/0:11,0:8:4.19:0,4,71	0/0:13,0:13:18.63:0,19,140	0/0:3,0:1:0.89:0,1,2
chr10	38149166	.	GCGCACA	G	1134.47	PASS	AB=0.964;AC=26;AF=0.542;AN=48;BaseQRankSum=5.261;DP=344;FS=21.276;HRun=0;HaplotypeScore=110.7858;InbreedingCoeff=0.0370;MQ=33.24;MQ0=29;MQRankSum=-4.936;QD=4.91;ReadPosRankSum=-0.611;VQSLOD=0.7625;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:22:0.95:0,1,3	1/1:7,0:7:3:25,3,0	./.	./.	0/1:3,4:7:0:0,0,0	0/1:14,0:12:31.15:31,0,46	0/1:22,0:19:15.57:16,0,65	0/0:15,0:12:22.33:0,22,200	0/0:8,0:6:1.89:0,2,6	0/1:20,0:18:94.85:117,0,95	0/1:12,0:11:1.14:1,0,13	1/1:2,0:12:9.03:159,9,0	1/1:2,6:8:12.04:199,12,0	./.	1/1:9,4:13:7.43:96,7,0	1/1:9,2:13:11.50:172,11,0	1/1:12,2:12:17.92:271,18,0	0/1:10,0:10:30.77:31,0,72	0/1:10,0:10:20.57:21,0,99	0/0:7,0:6:2.30:0,2,20	0/0:15,0:11:8.94:0,9,65	1/1:2,9:9:3.01:42,3,0	./.	1/1:15,0:12:0.47:1,0,0	0/1:18,0:16:7.71:8,0,27	0/1:11,0:8:11.40:11,0,40	0/1:13,0:13:12.74:76,0,13	0/0:3,0:1:2.90:0,3,16
chr10	38149167	.	C	CTCTT	82.39	PASS	AC=14;AF=0.292;AN=48;BaseQRankSum=2.681;DP=340;FS=1.134;HRun=0;HaplotypeScore=119.3397;InbreedingCoeff=0.5369;MQ=33.32;MQ0=29;MQRankSum=-3.445;QD=0.96;ReadPosRankSum=-4.860;VQSLOD=0.4844;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:22:1.20:0,1,21	0/0:7,0:7:2.82:0,3,37	./.	./.	1/1:6,0:7:0.47:1,0,0	0/0:14,0:12:16.15:0,16,153	0/0:22,0:19:13.05:0,13,131	0/0:14,0:11:30.09:0,30,549	0/0:8,0:6:1.46:0,1,16	0/0:20,0:18:42.09:0,42,369	0/0:12,0:11:2.40:0,2,23	1/1:12,0:12:6.29:19,6,0	0/0:8,0:8:6.71:0,7,39	./.	1/1:12,1:12:7.92:33,8,0	1/1:11,2:13:14.15:94,14,0	1/1:15,0:13:7.78:61,8,0	0/0:10,0:10:26.61:0,27,240	0/0:8,0:8:21.07:0,21,410	0/0:7,0:6:1.40:0,1,55	0/0:15,0:11:8.36:0,8,175	1/1:11,0:9:0.47:1,0,0	./.	1/1:15,0:12:0.81:1,1,0	0/0:18,0:16:3.98:0,4,44	0/0:11,0:8:11.77:0,12,123	0/0:13,0:13:14.65:0,15,258	0/0:3,0:1:2.97:0,3,20
chr10	38149168	.	GCACACACA	G	1612.31	PASS	AB=1.000;AC=33;AF=0.786;AN=42;BaseQRankSum=3.422;DP=342;FS=3.992;HRun=0;HaplotypeScore=113.9803;InbreedingCoeff=0.3317;MQ=33.31;MQ0=28;MQRankSum=-1.174;QD=7.26;ReadPosRankSum=-1.025;VQSLOD=2.2192;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:23:0.94:2,1,0	1/1:5,0:6:3.01:57,3,0	./.	./.	1/1:7,0:7:0.47:1,0,0	1/1:11,2:11:6.49:150,6,0	1/1:21,3:21:3.67:77,4,0	./.	0/0:8,0:6:2.25:0,2,27	1/1:12,6:17:21.54:497,22,0	1/1:10,2:11:3.48:51,3,0	1/1:13,0:12:9.03:167,9,0	0/1:8,0:8:13.26:53,0,13	./.	0/0:13,0:12:3.95:0,4,28	1/1:13,0:13:5.66:21,6,0	0/0:16,0:14:1.88:0,2,63	1/1:8,2:10:6.02:149,6,0	1/1:6,0:8:3:29,3,0	1/1:5,1:6:0.94:2,1,0	./.	0/0:11,0:9:2.96:0,3,19	./.	1/1:16,0:13:0.30:0,0,0	1/1:14,3:16:6.96:96,7,0	1/1:9,1:7:3.01:74,3,0	1/1:8,5:13:12.98:300,13,0	./.
chr10	38149291	.	CA	C	828.87	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=0.061;DP=304;FS=1.360;HRun=2;HaplotypeScore=51.2136;InbreedingCoeff=0.7412;MQ=70.90;MQ0=1;MQRankSum=-3.616;QD=10.63;ReadPosRankSum=0.519;VQSLOD=1.5941;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:23.87:0,24,213	0/0:4,0:4:5.82:0,6,35	0/0:20,0:17:20.17:0,20,299	0/0:15,0:14:12.80:0,13,128	1/1:7,0:7:8.99:73,9,0	0/0:8,0:8:13.96:0,14,98	0/0:24,0:24:36.01:0,36,269	0/0:9,0:9:20.21:0,20,124	1/1:4,3:7:8.91:74,9,0	0/0:4,0:4:3.31:0,3,30	0/0:5,0:5:12.01:0,12,107	0/0:12,0:12:25.84:0,26,155	1/1:6,1:8:14.92:125,15,0	1/1:7,2:10:8.81:61,9,0	1/1:6,5:11:20.91:221,21,0	1/1:2,1:3:5.95:56,6,0	1/1:12,4:17:20.95:216,21,0	0/0:19,0:18:15.99:0,16,106	0/0:4,0:4:4.96:0,5,34	0/0:5,1:6:8.02:0,8,55	0/0:17,0:16:9.53:0,10,165	1/1:7,2:9:20.66:175,21,0	0/0:14,0:14:33.79:0,34,214	0/0:28,0:28:54.09:0,54,296	0/0:9,0:9:11.67:0,12,126	0/0:13,0:13:16.15:0,16,75	0/1:6,0:6:18.27:18,0,20	0/0:1,0:1:1.55:0,2,4
chr10	38149418	.	T	TTTCAATGTTA	60175.47	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-7.155;DP=541;FS=0.573;HRun=0;HaplotypeScore=135.1752;InbreedingCoeff=0.9932;MQ=81.78;MQ0=0;MQRankSum=-11.318;QD=124.33;ReadPosRankSum=5.051;VQSLOD=5.8259;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,26:36:96.24:4503,96,0	1/1:3,4:8:21.07:1067,21,0	0/0:33,0:33:79.96:0,80,2346	0/0:24,0:24:63.16:0,63,1694	1/1:10,13:23:60.21:2780,60,0	1/1:5,5:10:30.10:1415,30,0	1/1:11,11:25:66.18:3164,66,0	1/1:24,7:34:96.30:4165,96,0	1/1:6,14:21:54.19:2810,54,0	1/1:4,10:15:36.12:1892,36,0	1/1:3,9:13:33.11:1569,33,0	1/1:7,8:15:45.15:2165,45,0	1/1:8,13:23:60.21:2990,60,0	1/1:12,13:28:69.24:3396,69,0	1/1:9,11:21:54.19:2698,54,0	1/1:2,14:17:48.12:2370,48,0	1/1:5,3:10:21.07:1013,21,0	1/1:5,5:9:24.08:1137,24,0	1/1:6,2:12:36.11:1328,36,0	1/1:2,12:15:42.14:2184,42,0	1/1:8,7:17:39.13:1806,39,0	1/1:6,11:19:48.16:2226,48,0	1/1:6,14:22:63.13:2648,63,0	1/1:6,11:17:46:2076,46,0	1/1:3,15:20:54.18:2682,54,0	1/1:14,7:24:60.21:2610,60,0	1/1:5,10:18:45.15:2255,45,0	1/1:2,6:8:24.08:1228,24,0
chr10	38150105	.	CCTCTCTCTCTCTCTCTCTCTCTCT	C	1008.09	PASS	AB=1.000;AC=15;AF=0.288;AN=52;BaseQRankSum=5.856;DP=538;FS=6.526;HRun=0;HaplotypeScore=278.9772;InbreedingCoeff=0.6339;MQ=67.26;MQ0=21;MQRankSum=-1.320;QD=12.00;ReadPosRankSum=-2.586;VQSLOD=1.2042;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:42.14:0,42,3458	1/1:4,2:4:2.97:20,3,0	0/0:38,0:23:12.02:0,12,231	0/0:46,0:17:20.19:0,20,924	0/0:18,0:19:30.10:0,30,2453	./.	0/1:14,0:14:8.88:133,0,9	0/0:28,0:27:30.08:0,30,1690	0/0:18,0:21:15.05:0,15,924	1/1:13,5:17:12.01:477,12,0	./.	0/0:4,0:6:3.01:0,3,179	0/0:5,0:14:18.04:0,18,868	0/0:15,0:15:24.97:0,25,2101	0/0:28,0:28:51.16:0,51,4215	0/0:10,0:14:21.07:0,21,1315	0/0:19,0:20:39.13:0,39,3357	1/1:5,0:4:3.01:148,3,0	0/0:23,0:24:30.06:0,30,1316	0/0:20,0:20:33.11:0,33,2717	0/0:38,0:36:36.70:0,37,2594	0/0:10,0:18:9.15:0,9,602	0/0:9,0:11:4.09:0,4,206	1/1:7,0:10:0.23:1,0,0	1/1:10,3:13:1.25:3,1,0	1/1:6,3:9:9.03:307,9,0	0/0:26,0:25:38.43:0,38,1657	1/1:8,0:6:3.01:64,3,0
chr10	38150155	.	T	TACACAC	2576.23	PASS	AB=1.000;AC=28;AF=0.538;AN=52;BaseQRankSum=4.772;DP=563;FS=0.728;HRun=0;HaplotypeScore=143.2409;InbreedingCoeff=0.6090;MQ=41.32;MQ0=67;MQRankSum=-7.643;QD=9.69;ReadPosRankSum=-5.020;VQSLOD=0.8155;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:28:48.13:0,48,911	1/1:13,0:8:6.02:137,6,0	./.	0/0:30,0:5:6.01:0,6,67	0/0:23,0:24:37.01:0,37,700	1/1:23,0:20:5.87:102,6,0	1/1:26,0:24:8.33:155,8,0	0/1:21,0:14:11.94:306,0,12	0/0:12,0:12:17.64:0,18,366	1/1:15,0:13:10.39:250,10,0	0/0:17,0:14:0.47:0,0,1	1/1:7,0:9:3.01:90,3,0	0/0:15,0:15:6.01:0,6,74	0/0:20,0:18:26.94:0,27,539	0/1:23,0:21:5.38:5,0,527	0/0:18,0:17:39.10:0,39,706	0/0:37,0:37:45.98:0,46,948	1/1:13,0:11:12.50:262,12,0	1/1:5,3:9:15.02:351,15,0	1/1:22,7:29:2.89:98,3,0	0/0:16,2:17:0:0,0,0	0/0:22,0:21:26.92:0,27,495	1/1:16,0:17:4.98:24,5,0	1/1:13,0:13:2:11,2,0	./.	1/1:14,0:11:20.10:443,20,0	1/1:16,8:23:12.03:387,12,0	1/1:3,0:9:6.02:132,6,0
chr10	38150323	.	AAATGAATG	A	4743.85	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=12.609;DP=541;FS=1.015;HRun=0;HaplotypeScore=138.3867;InbreedingCoeff=0.9458;MQ=62.14;MQ0=1;MQRankSum=-8.386;QD=36.77;ReadPosRankSum=-0.907;VQSLOD=4.0465;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,15:22:20.94:496,21,0	0/0:4,0:4:12.04:0,12,462	0/0:23,0:21:41.02:0,41,1009	0/0:14,0:11:10.27:0,10,631	0/0:29,0:29:78.27:0,78,3078	0/0:26,0:26:63.21:0,63,2264	0/0:15,0:15:27.09:0,27,1027	1/1:12,19:30:54.07:1195,54,0	0/0:12,0:12:30.10:0,30,1112	0/0:19,0:19:45.15:0,45,1858	0/0:24,0:24:63.22:0,63,2591	0/0:17,0:17:51.17:0,51,1903	0/0:15,0:15:39.13:0,39,1578	0/0:19,0:19:54.19:0,54,2138	0/0:18,0:18:39.13:0,39,1446	0/0:19,0:19:45.15:0,45,1834	0/0:20,0:20:48.16:0,48,1894	0/0:22,0:22:57.17:0,57,2187	1/1:4,14:18:42.07:854,42,0	1/1:6,18:24:45.12:1089,45,0	1/1:5,2:7:3.01:79,3,0	0/0:19,0:19:48.16:0,48,1969	0/0:27,0:27:63.22:0,63,2539	0/0:10,0:10:30.10:0,30,1153	0/0:25,0:25:63.22:0,63,2443	0/0:25,0:25:72.25:0,72,2878	1/1:6,20:25:39.07:1032,39,0	0/0:10,0:10:18.06:0,18,764
chr10	38150614	.	AC	A	1956.96	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=7.777;DP=670;FS=2.480;HRun=2;HaplotypeScore=66.5559;InbreedingCoeff=0.9969;MQ=89.25;MQ0=0;MQRankSum=-1.822;QD=32.08;ReadPosRankSum=1.967;VQSLOD=3.5210;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,117,1726	0/0:7,0:7:18.06:0,18,270	0/0:34,0:34:93.04:0,93,1229	0/0:23,0:23:68.61:0,69,905	0/0:21,0:21:63.20:0,63,922	0/0:26,0:26:78.22:0,78,1138	0/0:26,0:26:78.26:0,78,1150	0/0:31,0:31:84.28:0,84,1258	0/0:22,0:22:66.22:0,66,970	0/0:27,0:27:81.27:0,81,1195	0/0:20,0:20:60.20:0,60,899	1/1:0,19:19:54.18:701,54,0	0/0:20,0:20:60.19:0,60,878	0/0:24,0:24:72.23:0,72,1058	0/0:22,0:22:66.22:0,66,989	0/0:25,0:25:72.24:0,72,1079	0/0:29,0:29:87.29:0,87,1295	0/0:18,0:18:54.17:0,54,788	0/0:25,0:25:66.20:0,66,949	0/0:25,0:25:69.23:0,69,1033	0/0:15,0:15:45.09:0,45,627	0/0:28,0:28:84.27:0,84,1235	1/1:1,21:22:60.19:776,60,0	1/1:0,20:20:48.16:623,48,0	0/0:24,0:23:69.23:0,69,1031	0/0:28,0:28:84.27:0,84,1221	0/0:39,0:39:99:0,111,1663	0/0:10,0:10:30.10:0,30,447
chr10	38151606	.	G	GTTTA	14184.55	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=14.370;DP=640;FS=4.217;HRun=0;HaplotypeScore=145.7626;InbreedingCoeff=0.9992;MQ=70.11;MQ0=0;MQRankSum=-17.441;QD=58.37;ReadPosRankSum=-2.255;VQSLOD=5.7222;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:87.22:0,87,1537	0/0:11,0:11:30.10:0,30,562	0/0:22,0:20:25.49:0,25,763	0/0:17,0:14:25.92:0,26,436	1/1:4,29:34:93.16:2030,93,0	0/0:12,0:12:36.12:0,36,676	0/0:27,0:27:78.24:0,78,1382	0/0:31,0:31:90.29:0,90,1629	1/1:2,18:22:48.16:1179,48,0	0/0:24,0:24:69.22:0,69,1247	0/0:18,0:18:54.17:0,54,956	1/1:9,11:21:54.18:1334,54,0	1/1:5,18:25:54.19:1336,54,0	1/1:2,14:16:42.14:1025,42,0	1/1:2,26:29:78.27:1894,78,0	1/1:2,14:16:45.15:1143,45,0	1/1:3,8:11:27.09:668,27,0	0/0:27,0:27:75.21:0,75,1323	0/0:32,0:33:93.29:0,93,1638	0/0:31,0:31:90.29:0,90,1639	0/0:22,0:22:66.19:0,66,1129	1/1:3,20:24:60.11:1360,60,0	1/1:5,24:29:60.20:1499,60,0	1/1:5,10:16:30.10:718,30,0	0/0:21,0:21:63.17:0,63,1118	0/0:33,0:34:96.28:0,96,1617	0/0:27,0:27:78.20:0,78,1348	0/0:10,0:10:30.10:0,30,569
chr10	38152591	.	TTGTGTGTGTGTGTG	T	5311.70	PASS	AB=0.778;AC=17;AF=0.304;AN=56;BaseQRankSum=2.810;DP=484;FS=18.893;HRun=0;HaplotypeScore=206.2348;InbreedingCoeff=0.7853;MQ=60.67;MQ0=3;MQRankSum=-5.763;QD=39.94;ReadPosRankSum=0.975;VQSLOD=2.7679;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:28:17.31:0,17,433	1/1:4,2:6:6.02:236,6,0	0/0:28,0:14:6.02:0,6,132	0/0:18,0:13:3.01:0,3,45	0/0:13,0:13:18.06:0,18,657	1/1:7,8:15:21.07:797,21,0	1/1:15,4:20:23.42:701,23,0	0/0:23,0:23:30.08:0,30,917	0/0:13,0:13:9.50:0,10,280	1/1:11,9:20:12.53:737,13,0	1/1:7,4:11:5.01:346,5,0	0/0:14,0:14:19.74:0,20,131	0/0:10,0:10:15.05:0,15,565	0/0:17,0:16:18.06:0,18,815	0/0:13,0:13:6.02:0,6,196	0/0:10,0:10:18.06:0,18,570	0/0:17,0:16:18.06:0,18,649	1/1:15,2:18:14.72:373,15,0	0/0:13,0:17:26.45:0,26,705	0/0:7,0:18:21.07:0,21,467	0/0:28,0:35:21.04:0,21,407	0/0:18,0:17:21.06:0,21,812	0/0:20,0:20:23.89:0,24,566	0/0:22,0:22:7.37:0,7,242	1/1:10,12:22:30.08:1178,30,0	1/1:8,6:14:24.31:715,24,0	0/0:7,0:17:21.07:0,21,443	0/1:5,1:7:9.98:228,0,10
chr10	38152629	.	GTA	G	395.99	PASS	AB=0.874;AC=21;AF=0.404;AN=52;BaseQRankSum=10.469;DP=432;FS=0.000;HRun=0;HaplotypeScore=139.5850;InbreedingCoeff=0.3918;MQ=48.02;MQ0=13;MQRankSum=-7.311;QD=2.04;ReadPosRankSum=7.465;VQSLOD=1.7833;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:25.71:0,26,233	0/0:6,0:6:6.10:0,6,81	./.	0/1:14,0:4:0.21:10,0,0	1/1:14,1:15:5.18:80,5,0	0/0:19,0:19:13.03:0,13,180	0/0:18,0:18:21.01:0,21,219	0/0:18,0:17:41.81:0,42,334	0/1:5,2:9:5.68:36,0,6	0/0:18,0:18:4.57:0,5,140	0/0:8,0:8:8.80:0,9,86	1/1:15,0:15:22.76:114,23,0	0/0:7,0:8:3.60:0,4,14	0/1:6,6:11:43.19:69,0,43	./.	1/1:1,3:4:3.01:41,3,0	1/1:13,0:15:14.11:69,14,0	0/0:16,0:16:27.14:0,27,235	0/1:12,0:10:2.45:2,0,57	0/0:26,0:26:23.98:0,24,257	0/0:40,0:39:62.76:0,63,490	0/1:10,3:12:3.24:33,0,3	1/1:16,0:16:4.05:26,4,0	1/1:25,0:25:5.80:49,6,0	0/1:18,0:18:20.05:20,0,85	0/0:21,0:21:19.08:0,19,312	0/1:20,0:20:2.63:3,0,110	1/1:3,0:2:3.06:8,3,0
chr10	38153770	.	GAGAT	G	379.49	PASS	AB=1.000;AC=19;AF=0.352;AN=54;BaseQRankSum=8.021;DP=549;FS=2.503;HRun=0;HaplotypeScore=127.2430;InbreedingCoeff=0.8069;MQ=77.39;MQ0=20;MQRankSum=-4.534;QD=3.24;ReadPosRankSum=-4.287;VQSLOD=1.1921;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:37.64:0,38,1902	0/0:5,0:5:15.05:0,15,340	0/0:53,0:29:47.23:0,47,1194	0/0:65,0:31:53.11:0,53,875	1/1:4,0:4:0.47:1,0,0	0/0:33,0:33:54.59:0,55,1466	0/0:29,0:29:69.97:0,70,1598	0/0:23,0:23:57.18:0,57,1225	1/1:6,0:6:3.01:30,3,0	0/0:27,0:27:80.05:0,80,1749	0/0:12,0:12:33.10:0,33,794	1/1:14,7:20:14.98:143,15,0	./.	0/1:9,0:9:0:0,0,0	1/1:11,0:11:2.96:36,3,0	1/1:6,1:6:3.45:22,3,0	1/1:16,0:16:11.99:119,12,0	0/0:13,0:13:36.12:0,36,879	0/0:22,0:22:66.22:0,66,1614	0/0:26,0:26:44.36:0,44,1590	0/0:25,0:24:54.02:0,54,1324	1/1:5,0:5:5.98:46,6,0	1/1:13,2:14:6.12:46,6,0	1/1:19,4:22:13.61:109,14,0	0/0:18,0:18:48.16:0,48,1203	0/0:16,0:16:33.82:0,34,1021	0/0:17,0:17:44.36:0,44,1048	0/0:10,0:9:21.54:0,22,533
chr10	38153772	.	GATAGAGA	G	675.09	PASS	AB=0.957;AC=19;AF=0.352;AN=54;BaseQRankSum=7.972;DP=513;FS=6.062;HRun=0;HaplotypeScore=143.3326;InbreedingCoeff=0.7560;MQ=77.47;MQ0=23;MQRankSum=-6.738;QD=8.33;ReadPosRankSum=-5.244;VQSLOD=0.1988;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:83.41:0,83,2896	0/0:6,0:6:15.05:0,15,502	0/0:52,0:27:68.87:0,69,1885	0/0:67,0:30:71.90:0,72,1466	1/1:1,0:1:3:25,3,0	0/0:33,0:33:66.28:0,66,2300	0/0:28,0:28:70.04:0,70,2294	0/0:22,0:22:60.20:0,60,1965	1/1:1,0:2:3.01:49,3,0	0/0:28,0:28:84.26:0,84,2713	0/0:12,0:12:33.11:0,33,1161	1/1:18,0:18:23.51:211,24,0	./.	1/1:3,0:4:1.25:3,1,0	1/1:1,6:7:3.01:57,3,0	1/1:2,1:3:8.92:109,9,0	1/1:2,6:9:8.47:207,8,0	0/0:13,0:13:36.12:0,36,1197	0/0:23,0:22:66.23:0,66,2437	0/0:24,0:24:69.22:0,69,2407	0/0:26,0:25:65.79:0,66,2086	1/1:2,0:2:6.02:80,6,0	1/1:12,0:11:6.53:33,7,0	0/1:21,0:21:6.87:77,0,7	0/0:19,0:19:54.17:0,54,1863	0/0:16,0:16:47.88:0,48,1560	0/0:17,0:16:45.15:0,45,1510	0/0:11,0:10:26.92:0,27,816
chr10	38153787	.	GGAGAGAGA	G	644.68	PASS	AB=0.893;AC=14;AF=0.368;AN=38;BaseQRankSum=0.556;DP=497;FS=1.102;HRun=0;HaplotypeScore=130.4077;InbreedingCoeff=0.1087;MQ=59.14;MQ0=29;MQRankSum=-0.729;QD=3.96;ReadPosRankSum=1.779;VQSLOD=2.5665;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:40:33.53:0,34,612	0/1:5,2:7:14.35:68,0,14	./.	0/0:55,0:18:0:0,0,0	./.	0/0:31,0:31:6.02:0,6,81	0/1:19,5:23:8.05:68,0,8	0/0:26,0:26:2.94:0,3,19	./.	0/1:29,1:29:34.37:124,0,34	./.	0/0:17,0:16:8.21:0,8,99	./.	./.	./.	1/1:4,0:4:2.75:42,3,0	./.	1/1:12,1:13:6.02:130,6,0	0/0:19,0:18:6.01:0,6,66	0/1:17,0:17:22.05:22,0,39	0/0:26,0:25:11.99:0,12,131	./.	0/0:11,0:10:3.44:0,3,21	0/0:22,0:21:5.74:0,6,147	1/1:18,0:19:10.92:94,11,0	0/1:18,0:17:9.58:92,0,10	0/1:16,0:18:9.92:10,0,18	1/1:7,0:8:6.02:123,6,0
chr10	38155590	.	T	TTG	3904.77	PASS	AB=0.779;AC=22;AF=0.393;AN=56;BaseQRankSum=-7.144;DP=651;FS=0.000;HRun=0;HaplotypeScore=92.4406;InbreedingCoeff=-0.1166;MQ=60.28;MQ0=18;MQRankSum=-1.424;QD=10.67;ReadPosRankSum=0.571;VQSLOD=2.8540;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:17.83:0,18,180	0/1:3,4:7:20.91:115,0,21	0/0:35,0:16:3:0,3,27	0/0:60,0:26:3.01:0,3,31	1/1:7,10:17:10.06:178,10,0	0/1:12,7:20:56.83:203,0,57	0/1:9,5:16:48.71:200,0,49	0/0:29,0:28:12.03:0,12,133	0/0:14,0:17:32.59:0,33,307	0/1:24,5:28:15.93:243,0,16	0/1:11,7:19:23.45:246,0,23	0/0:15,0:16:24.06:0,24,266	1/1:10,9:20:33.09:477,33,0	0/1:12,3:15:72.44:118,0,72	0/1:12,5:16:99:110,0,143	0/1:12,7:19:42.70:229,0,43	1/1:13,13:26:6.65:514,7,0	1/1:11,10:24:6.93:258,7,0	0/0:19,0:17:16.83:0,17,159	0/1:21,0:23:6.68:7,0,312	0/0:41,1:42:5.41:0,5,440	0/1:9,7:17:67.03:329,0,67	0/1:22,0:25:6.81:7,0,283	0/0:19,0:23:33.06:0,33,310	0/1:14,7:21:99:115,0,101	0/1:21,7:28:68.65:305,0,69	0/0:13,0:18:38.27:0,38,336	0/1:11,8:19:12.32:251,0,12
chr10	38155714	.	T	TAAA	4052.96	PASS	AB=0.743;AC=32;AF=0.571;AN=56;BaseQRankSum=2.594;DP=538;FS=6.074;HRun=13;HaplotypeScore=95.9854;InbreedingCoeff=0.6470;MQ=69.71;MQ0=0;MQRankSum=-0.822;QD=11.38;ReadPosRankSum=-2.837;VQSLOD=0.7227;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,0:26:21.49:55,21,0	0/0:6,0:7:14.88:0,15,147	0/1:16,0:13:27.34:27,0,49	0/0:16,0:12:11.53:0,12,127	1/1:12,2:23:44.85:479,45,0	0/0:14,0:18:31.46:0,31,352	0/0:15,0:16:16.43:0,16,342	0/1:14,0:23:29.28:141,0,29	1/1:7,4:19:36.03:471,36,0	0/0:21,0:25:42.37:0,42,434	0/0:27,0:27:32.02:0,32,584	1/1:3,8:13:11.98:134,12,0	1/1:5,7:14:22.27:334,22,0	1/1:7,8:15:3.01:54,3,0	1/1:4,8:15:6.02:107,6,0	1/1:2,12:18:32.10:480,32,0	1/1:5,17:24:38.14:618,38,0	0/0:16,0:17:29.61:0,30,301	0/1:6,0:17:13.29:35,0,13	1/1:10,0:32:36.77:176,37,0	1/1:2,0:7:7.85:37,8,0	1/1:10,8:21:22.55:271,23,0	1/1:1,16:25:21:223,21,0	1/1:3,12:16:15.05:268,15,0	0/0:16,0:17:35.83:0,36,369	0/0:26,0:30:46.44:0,46,481	0/1:14,0:31:48.19:144,0,48	0/0:7,0:9:23.86:0,24,219
chr10	38155943	.	C	CCAGGTCTCAAAATATAAGA	50048.23	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=0.425;DP=707;FS=2.483;HRun=0;HaplotypeScore=330.8273;InbreedingCoeff=0.9728;MQ=67.85;MQ0=0;MQRankSum=-20.219;QD=180.68;ReadPosRankSum=1.501;VQSLOD=4.5971;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,141,6873	0/0:13,0:13:39.13:0,39,2141	0/0:29,0:29:78.24:0,78,2934	0/0:25,0:24:69.20:0,69,2902	1/1:20,8:29:75.25:4849,75,0	0/0:14,0:14:42.13:0,42,2057	0/0:17,0:17:48.16:0,48,2407	0/0:23,0:23:66.16:0,66,2609	1/1:19,9:29:81.28:6070,81,0	0/0:39,0:39:99:0,111,4754	0/0:15,0:15:42.14:0,42,2000	1/1:18,11:31:81.23:6119,81,0	1/1:11,11:31:75.56:5930,76,0	1/1:14,10:27:69.24:5660,69,0	1/1:19,6:29:69.24:5118,69,0	1/1:11,8:19:51.18:3939,51,0	1/1:9,4:18:30.10:2023,30,0	0/0:20,0:20:60.07:0,60,2719	0/0:18,0:18:48.11:0,48,2027	0/0:30,0:30:84.29:0,84,4003	0/0:62,0:62:99:0,178,8739	1/1:20,9:33:96.29:6228,96,0	1/1:13,6:21:54.19:3247,54,0	1/1:6,2:9:15.05:864,15,0	0/0:16,0:15:42.14:0,42,1604	0/0:33,0:33:99:0,99,4767	0/0:27,0:27:75.26:0,75,3660	0/0:1,0:1:3.01:0,3,165
chr10	38156094	.	TACACACACAC	T	5482.73	PASS	AB=0.779;AC=30;AF=0.556;AN=54;BaseQRankSum=2.942;DP=648;FS=27.257;HRun=0;HaplotypeScore=242.0649;InbreedingCoeff=0.3355;MQ=58.53;MQ0=10;MQRankSum=-7.115;QD=13.12;ReadPosRankSum=-2.329;VQSLOD=2.0297;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:37:32.47:0,32,712	1/1:4,5:10:21.03:537,21,0	./.	0/0:29,0:20:6.02:0,6,83	1/1:13,1:22:6.85:61,7,0	0/1:13,7:20:28.22:376,0,28	1/1:22,8:31:9.91:210,10,0	0/0:21,0:21:18.03:0,18,256	1/1:12,1:21:6.79:192,7,0	0/1:17,14:32:26.96:1191,0,27	1/1:7,9:16:8.92:232,9,0	0/1:17,0:23:28.66:29,0,261	1/1:11,0:15:11.75:147,12,0	0/1:17,1:28:30.93:46,0,31	1/1:11,0:28:24.08:379,24,0	0/1:14,0:23:99:128,0,102	0/1:15,2:19:49.28:104,0,49	1/1:11,8:19:23.75:581,24,0	0/0:15,0:15:18.06:0,18,389	0/0:13,0:20:30.10:0,30,745	0/0:42,0:44:62.73:0,63,1121	1/1:19,2:29:15.48:231,15,0	0/1:18,0:25:7.95:8,0,188	0/0:18,0:22:10.68:0,11,102	1/1:11,11:22:12.04:358,12,0	1/1:15,8:24:20.85:620,21,0	0/0:14,0:16:22.32:0,22,683	0/1:6,0:6:54.74:55,0,70
chr10	38156127	.	A	AGG	620.41	PASS	AB=0.969;AC=10;AF=0.179;AN=56;BaseQRankSum=6.775;DP=801;FS=3.689;HRun=0;HaplotypeScore=216.5506;InbreedingCoeff=-0.2255;MQ=49.14;MQ0=22;MQRankSum=-4.256;QD=2.77;ReadPosRankSum=3.550;VQSLOD=2.6670;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:43:79.47:0,79,1080	0/1:13,0:13:99:104,0,168	0/0:26,0:5:11.93:0,12,158	0/0:37,0:12:4.91:0,5,376	0/0:30,0:28:35.88:0,36,473	0/1:28,0:27:72.91:73,0,510	0/0:36,0:35:35.07:0,35,842	0/0:27,0:27:72.23:0,72,1007	0/1:26,1:27:65.69:66,0,459	0/1:45,0:44:77.99:78,0,1153	0/1:13,0:13:51.61:52,0,129	0/0:36,0:35:43.21:0,43,591	0/0:19,0:19:35.99:0,36,464	0/0:32,0:32:38.99:0,39,496	0/0:33,0:33:50.97:0,51,629	0/0:22,0:22:36.84:0,37,457	0/0:26,0:24:52.54:0,53,622	0/1:19,0:19:44.35:44,0,278	0/0:22,0:19:48.53:0,49,555	0/0:26,0:26:60.06:0,60,743	0/0:87,0:84:99:0,172,2380	0/1:25,0:25:36.02:36,0,279	0/0:23,0:22:45:0,45,570	0/0:33,0:32:49.40:0,49,642	0/1:23,0:23:99:108,0,204	0/1:22,0:22:99:162,0,453	0/0:18,0:18:39.31:0,39,617	0/1:5,3:8:42.71:43,0,192
chr10	38156191	.	T	TAC	2597.33	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-10.873;DP=1013;FS=0.524;HRun=0;HaplotypeScore=181.2616;InbreedingCoeff=0.9991;MQ=55.79;MQ0=6;MQRankSum=1.532;QD=23.83;ReadPosRankSum=3.916;VQSLOD=4.1774;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:77.98:0,78,958	0/0:19,0:19:36.10:0,36,443	0/0:32,0:20:41.49:0,41,420	0/0:41,0:25:49.18:0,49,570	0/0:42,0:41:77.79:0,78,947	0/0:26,0:25:70.07:0,70,849	0/0:34,0:34:71.98:0,72,872	0/0:48,0:48:87.22:0,87,1034	0/0:39,0:39:84.55:0,85,1135	0/0:54,0:54:99:0,144,1817	0/0:14,0:14:36.10:0,36,444	1/1:3,33:36:44.45:738,44,0	0/0:38,0:38:99:0,105,1292	0/0:35,0:35:74.62:0,75,951	0/0:50,0:50:99:0,126,1551	0/0:41,0:41:99:0,108,1359	0/0:25,0:25:54.10:0,54,662	0/0:17,0:17:36.09:0,36,442	0/0:26,0:26:62.99:0,63,732	0/0:37,0:37:99:0,102,1241	0/0:93,0:94:99:0,228,2761	0/0:31,0:31:65.97:0,66,809	1/1:3,20:22:35.92:601,36,0	1/1:9,40:48:82.04:1401,82,0	0/0:33,0:33:78.20:0,78,951	0/0:42,0:42:99:0,120,1512	0/0:30,0:30:84.18:0,84,1006	0/0:8,0:8:24.08:0,24,305
chr10	38156970	.	TACACACACACAC	T	2596.18	PASS	AB=0.757;AC=20;AF=0.400;AN=50;BaseQRankSum=4.295;DP=548;FS=22.916;HRun=0;HaplotypeScore=170.0812;InbreedingCoeff=0.6738;MQ=63.85;MQ0=12;MQRankSum=-2.797;QD=12.02;ReadPosRankSum=-0.320;VQSLOD=0.8696;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:45.15:0,45,1861	1/1:1,4:5:2.96:102,3,0	./.	./.	0/0:16,0:20:15.05:0,15,373	1/1:12,2:13:5.82:205,6,0	1/1:12,5:16:9.03:308,9,0	0/0:21,0:19:6.49:0,6,122	0/0:14,0:15:24.08:0,24,685	1/1:18,7:25:13.52:383,14,0	1/1:21,3:24:3.01:103,3,0	1/1:14,11:26:12.04:391,12,0	0/0:16,0:20:19.23:0,19,503	0/0:12,0:13:18.04:0,18,506	0/0:17,0:21:21.07:0,21,546	0/0:16,0:20:33.11:0,33,756	0/0:19,0:18:20.90:0,21,527	0/1:15,5:20:47.81:296,0,48	0/0:17,0:18:13.40:0,13,407	0/0:15,0:18:12.04:0,12,314	0/0:22,0:27:27.04:0,27,1033	0/0:17,0:16:21.06:0,21,528	1/1:14,0:14:5.81:67,6,0	1/1:19,5:23:9.50:308,10,0	0/1:15,10:25:46.75:196,0,47	1/1:10,12:22:20.08:419,20,0	0/0:10,0:10:11.71:0,12,289	./.
chr10	38157621	.	G	GA	981.42	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-8.857;DP=500;FS=2.403;HRun=7;HaplotypeScore=48.5914;InbreedingCoeff=0.9964;MQ=83.88;MQ0=0;MQRankSum=-1.218;QD=28.04;ReadPosRankSum=0.709;VQSLOD=4.2412;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:60.10:0,60,579	0/0:11,0:11:30.05:0,30,290	0/0:18,0:18:39.02:0,39,369	0/0:13,0:13:35.98:0,36,335	0/0:27,0:27:75.10:0,75,719	0/0:20,0:20:57.09:0,57,550	0/0:10,0:10:24.03:0,24,231	0/0:26,0:26:75.11:0,75,720	0/0:14,0:14:39.05:0,39,371	0/0:24,0:24:63.09:0,63,604	0/0:36,0:36:81.11:0,81,776	1/1:2,10:12:30.09:362,30,0	0/0:13,0:13:36.05:0,36,347	0/0:17,0:17:42.07:0,42,406	0/0:15,0:15:33.05:0,33,318	0/0:11,0:11:30.04:0,30,290	0/0:21,0:21:57.06:0,57,543	0/0:12,0:12:30.01:0,30,282	0/0:17,0:17:39.06:0,39,376	0/0:32,0:32:75.09:0,75,718	0/0:13,0:13:27.04:0,27,260	0/0:16,0:16:39.03:0,39,369	1/1:0,15:15:42.13:507,42,0	1/1:0,8:8:21.06:254,21,0	0/0:16,0:16:48.08:0,48,464	0/0:26,0:26:66.10:0,66,637	0/0:24,0:24:66.08:0,66,626	0/0:12,0:12:36.06:0,36,348
chr10	38157746	.	CGTGTGT	C	1350.01	PASS	AB=0.883;AC=30;AF=0.536;AN=56;BaseQRankSum=4.718;DP=527;FS=1.629;HRun=0;HaplotypeScore=128.6632;InbreedingCoeff=0.3750;MQ=66.14;MQ0=6;MQRankSum=-4.147;QD=3.95;ReadPosRankSum=0.721;VQSLOD=2.5629;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:36:6.44:117,6,0	1/1:1,2:2:3.48:62,3,0	0/0:30,0:15:3.01:0,3,58	0/1:25,0:20:8.41:8,0,35	0/0:24,0:26:27.07:0,27,543	0/1:17,3:21:4.54:228,0,5	1/1:13,7:20:6.45:81,6,0	0/0:28,0:31:2.51:0,3,11	0/0:11,0:11:15.05:0,15,418	1/1:22,1:23:15.01:239,15,0	1/1:11,4:15:5.93:65,6,0	0/1:19,1:21:11.94:146,0,12	0/0:12,0:12:18.06:0,18,482	0/0:16,0:16:27.09:0,27,698	0/0:20,0:20:33.05:0,33,758	0/0:11,0:13:21.06:0,21,458	0/0:15,0:15:18.06:0,18,497	1/1:15,1:16:1.46:17,1,0	1/1:21,0:26:6.64:90,7,0	0/1:7,0:8:10.12:10,0,15	1/1:32,0:30:2.88:15,3,0	0/0:10,0:11:18.05:0,18,383	1/1:13,0:21:1.77:4,2,0	0/1:13,0:13:4.73:5,0,70	1/1:10,6:16:12.04:231,12,0	1/1:17,0:17:4.74:73,5,0	0/1:18,0:23:72.08:115,0,72	1/1:2,0:2:2.98:22,3,0
chr10	38158134	.	CA	C	2175.47	PASS	AB=0.857;AC=33;AF=0.611;AN=54;BaseQRankSum=2.666;DP=313;FS=12.230;HRun=10;HaplotypeScore=54.5347;InbreedingCoeff=0.6797;MQ=40.24;MQ0=24;MQRankSum=-2.409;QD=11.70;ReadPosRankSum=2.957;VQSLOD=1.5373;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:10,3:12:17.81:144,18,0	0/0:5,0:4:5.95:0,6,46	./.	0/0:10,0:1:2.22:0,2,7	1/1:9,12:21:35.92:312,36,0	0/0:10,0:9:5.97:0,6,59	0/0:18,0:16:23.94:0,24,224	1/1:9,10:19:1.69:222,2,0	1/1:2,3:5:5.95:52,6,0	0/0:16,0:15:20.67:0,21,232	0/0:16,0:17:32.91:0,33,339	1/1:5,7:12:17.96:156,18,0	1/1:3,5:8:14.98:130,15,0	1/1:0,4:4:9:78,9,0	1/1:1,6:7:17.99:156,18,0	1/1:5,5:9:11.85:104,12,0	1/1:8,5:10:17.94:150,18,0	0/0:16,0:12:25.62:0,26,269	1/1:9,5:12:17.97:152,18,0	1/1:6,9:13:23.64:208,24,0	1/1:3,3:6:5.47:51,5,0	1/1:6,9:14:32.63:265,33,0	1/1:3,4:6:5.13:51,5,0	0/1:5,1:3:13.77:20,0,14	0/0:8,0:7:3.01:0,3,33	0/0:14,0:11:14.87:0,15,147	1/1:5,6:10:2.54:113,3,0	0/0:7,0:5:3.01:0,3,30
chr10	38158165	.	AAAAAG	A	1258.93	PASS	AB=0.973;AC=15;AF=0.268;AN=56;BaseQRankSum=3.579;DP=400;FS=32.017;HRun=0;HaplotypeScore=82.5300;InbreedingCoeff=0.4465;MQ=52.56;MQ0=19;MQRankSum=-1.945;QD=9.91;ReadPosRankSum=3.489;VQSLOD=0.7174;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:29.51:0,30,559	0/0:3,0:3:9.01:0,9,109	0/0:32,0:9:19.02:0,19,195	0/0:29,0:9:17.55:0,18,160	1/1:7,12:18:10.60:163,11,0	0/0:10,0:10:11.99:0,12,217	0/0:18,0:17:27.90:0,28,371	0/0:22,0:22:42.97:0,43,602	1/1:7,1:8:13.87:193,14,0	0/0:16,0:15:27.56:0,28,306	0/0:15,0:15:41.29:0,41,544	0/1:11,0:11:27.41:27,0,56	0/1:14,1:13:10.32:189,0,10	0/1:9,0:9:19.12:127,0,19	1/1:3,9:11:5.61:87,6,0	0/1:12,1:12:26.67:181,0,27	1/1:15,1:13:2.12:239,2,0	0/0:14,0:10:23.67:0,24,213	0/0:13,0:8:20.94:0,21,249	0/0:14,0:13:27.69:0,28,292	0/0:5,0:5:8.92:0,9,159	1/1:11,3:13:15.47:217,15,0	0/1:10,0:9:3.63:4,0,65	0/0:2,0:1:2.80:0,3,13	0/0:17,0:16:26.90:0,27,278	0/0:20,0:20:51.43:0,51,713	0/0:11,0:9:23.88:0,24,389	0/0:9,0:9:17.84:0,18,224
chr10	38158166	.	AAAAG	A	1089.92	PASS	AB=0.964;AC=18;AF=0.321;AN=56;BaseQRankSum=4.736;DP=390;FS=33.905;HRun=0;HaplotypeScore=77.2170;InbreedingCoeff=0.6481;MQ=56.20;MQ0=18;MQRankSum=-2.343;QD=9.48;ReadPosRankSum=3.570;VQSLOD=0.9666;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:29.06:0,29,450	0/0:3,0:3:8.94:0,9,80	0/0:34,0:11:24.56:0,25,223	0/0:29,0:9:17.51:0,18,131	1/1:16,0:15:11.97:122,12,0	0/0:10,0:10:10.28:0,10,160	0/0:18,0:17:26.80:0,27,293	0/0:24,0:24:37.54:0,38,480	1/1:6,1:7:14.80:157,15,0	0/0:16,0:15:22.97:0,23,210	0/0:15,0:15:40.76:0,41,408	0/1:11,0:11:18.81:39,0,19	1/1:11,2:11:5.98:194,6,0	0/1:5,1:6:2.19:106,0,2	1/1:12,0:11:8.50:88,9,0	0/1:12,0:11:2.15:133,0,2	1/1:14,0:12:14.91:214,15,0	0/0:14,0:11:24.76:0,25,185	0/0:14,0:9:20.87:0,21,202	0/0:14,0:13:24.06:0,24,214	0/0:5,0:5:8.82:0,9,133	1/1:11,1:12:10.39:191,10,0	0/1:10,0:9:5.82:25,0,6	1/1:2,0:1:0.47:1,0,0	0/0:17,0:16:24.98:0,25,218	0/0:20,0:20:46.59:0,47,551	0/0:10,0:8:23.83:0,24,306	0/0:9,0:9:14.77:0,15,141
chr10	38158169	.	AG	A	914.52	PASS	AB=0.977;AC=28;AF=0.500;AN=56;BaseQRankSum=3.858;DP=341;FS=5.519;HRun=1;HaplotypeScore=58.7371;InbreedingCoeff=0.4957;MQ=61.03;MQ0=15;MQRankSum=-4.989;QD=5.75;ReadPosRankSum=0.320;VQSLOD=0.5310;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:29.66:0,30,211	0/1:2,0:2:15.18:15,0,18	0/0:34,0:11:24.35:0,24,194	0/0:30,0:10:20.38:0,20,134	1/1:12,0:11:11.49:63,11,0	0/0:8,0:8:7.25:0,7,60	0/0:17,0:16:26.82:0,27,187	0/1:20,0:20:21.38:21,0,225	1/1:5,0:6:15.10:88,15,0	0/0:13,0:13:14.91:0,15,150	0/1:13,1:14:14.95:15,0,114	1/1:7,1:8:16.62:115,17,0	1/1:11,0:9:19.63:116,20,0	1/1:6,0:6:15.90:91,16,0	1/1:11,0:10:8.66:50,9,0	1/1:9,1:8:15.99:84,16,0	1/1:11,0:10:28.28:179,28,0	0/0:13,0:12:3.16:0,3,127	0/1:12,1:9:4.77:5,0,113	0/1:8,0:8:0.17:0,0,77	0/0:5,0:5:8.83:0,9,62	1/1:9,0:9:22.69:123,23,0	1/1:6,1:7:9.07:106,9,0	1/1:1,1:1:2.97:20,3,0	0/0:13,0:13:16.18:0,16,140	0/0:19,1:20:4.22:0,4,250	0/1:9,0:7:18.02:18,0,100	0/0:4,0:4:5.96:0,6,44
chr10	38158291	.	AG	A	1714.34	PASS	AB=1.000;AC=18;AF=0.333;AN=54;BaseQRankSum=-1.337;DP=388;FS=16.683;HRun=9;HaplotypeScore=62.7586;InbreedingCoeff=0.7658;MQ=66.90;MQ0=9;MQRankSum=-0.700;QD=14.17;ReadPosRankSum=0.543;VQSLOD=1.9589;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:23:29.90:0,30,92	0/0:4,0:4:9.03:0,9,103	0/0:26,0:21:32.31:0,32,396	0/0:22,0:17:24.06:0,24,261	1/1:0,8:6:18.01:165,18,0	0/0:14,0:14:23.10:0,23,248	0/0:24,0:24:51.25:0,51,559	0/1:18,0:17:16.86:86,0,17	1/1:1,10:11:29.05:252,29,0	0/0:9,0:9:21.06:0,21,242	0/0:10,0:10:21.03:0,21,221	0/0:5,0:13:7.66:0,8,52	1/1:0,11:10:27.01:247,27,0	1/1:0,10:10:30.02:274,30,0	1/1:2,6:8:15:137,15,0	1/1:2,12:13:30.01:274,30,0	1/1:1,16:16:35.15:327,35,0	0/0:18,0:18:39.09:0,39,436	0/1:14,0:14:13.81:14,0,47	0/0:8,0:7:6.11:0,6,17	0/0:24,0:23:3:0,3,29	1/1:2,7:9:15:137,15,0	./.	0/0:14,0:18:38.75:0,39,296	0/0:10,0:10:28.63:0,29,313	0/0:12,0:12:33.08:0,33,367	0/0:20,1:19:16.33:0,16,51	0/0:8,0:8:19.61:0,20,210
chr10	38158292	.	G	GAGA	3823.65	PASS	AB=0.892;AC=15;AF=0.268;AN=56;BaseQRankSum=-6.832;DP=392;FS=7.358;HRun=0;HaplotypeScore=73.5745;InbreedingCoeff=0.5110;MQ=66.67;MQ0=9;MQRankSum=-1.260;QD=23.03;ReadPosRankSum=-0.272;VQSLOD=2.6533;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,18:24:43.20:860,43,0	0/0:4,0:4:9.03:0,9,146	0/0:26,0:21:50.91:0,51,712	0/0:22,0:17:42.98:0,43,512	0/0:8,0:6:17.77:0,18,128	0/0:13,0:14:25.60:0,26,460	0/0:23,0:23:63.20:0,63,1005	1/1:3,13:18:42.01:662,42,0	0/1:12,0:12:79.39:79,0,115	0/0:9,0:9:24.08:0,24,393	0/0:11,0:11:24.06:0,24,343	0/0:10,0:10:9.06:0,9,86	0/1:11,0:10:0.46:0,0,156	0/0:10,0:10:2.52:0,3,181	0/1:8,0:8:9.42:9,0,103	0/0:14,0:13:8.61:0,9,259	0/1:18,0:17:17.90:18,0,202	0/0:17,0:17:45.15:0,45,743	1/1:2,11:16:39.57:708,40,0	1/1:2,5:7:12.03:245,12,0	0/1:3,20:25:11.36:720,0,11	0/0:9,0:9:20.98:0,21,214	0/0:2,0:2:3:0,3,26	0/0:17,0:17:39.24:0,39,353	0/0:10,0:10:30.10:0,30,469	0/0:12,0:12:33.09:0,33,538	1/1:1,17:19:26.12:522,26,0	0/0:8,0:8:21.07:0,21,323
chr10	38158451	.	A	AGT	22189.53	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-5.400;DP=665;FS=2.960;HRun=0;HaplotypeScore=87.6363;InbreedingCoeff=0.9982;MQ=94.86;MQ0=0;MQRankSum=-6.138;QD=53.21;ReadPosRankSum=3.885;VQSLOD=5.5058;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,38:38:93.32:1882,93,0	0/0:7,0:7:18.06:0,18,294	0/0:28,0:28:53.39:0,53,1167	0/0:37,0:37:99:0,102,1611	1/1:1,31:31:84.29:1704,84,0	0/0:28,0:28:84.27:0,84,1344	0/0:32,0:32:96.33:0,96,1566	1/1:2,31:36:99:2064,108,0	1/1:5,23:28:72.25:1457,72,0	0/0:29,0:29:87.17:0,87,1342	0/0:26,0:26:78.25:0,78,1237	1/1:2,18:20:57.20:1153,57,0	1/1:0,21:22:63.22:1280,63,0	1/1:0,18:18:48.16:975,48,0	1/1:0,16:16:48.16:971,48,0	1/1:0,18:18:51.18:1036,51,0	1/1:0,26:28:69.24:1400,69,0	0/0:19,0:19:57.19:0,57,930	1/1:0,18:18:54.19:1097,54,0	1/1:3,20:25:60.21:1218,60,0	1/1:2,26:29:78.27:1578,78,0	1/1:2,21:23:54.19:1094,54,0	1/1:1,18:21:51.18:1028,51,0	1/1:1,25:26:66.23:1341,66,0	0/0:12,0:12:36.12:0,36,587	0/0:23,0:23:69.24:0,69,1125	1/1:1,16:17:45.09:913,45,0	0/0:7,0:7:21.07:0,21,343
chr10	38158539	.	GGTGTGT	G	649.30	PASS	AB=0.899;AC=20;AF=0.417;AN=48;BaseQRankSum=-0.660;DP=544;FS=5.345;HRun=0;HaplotypeScore=147.3780;InbreedingCoeff=0.4662;MQ=77.93;MQ0=8;MQRankSum=-3.358;QD=3.31;ReadPosRankSum=0.323;VQSLOD=2.1169;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:21.07:0,21,435	./.	./.	./.	0/0:12,0:12:2.99:0,3,24	1/1:21,0:21:3.01:60,3,0	1/1:12,5:18:14.39:176,14,0	0/0:34,0:34:9.02:0,9,101	0/0:17,0:19:15.03:0,15,174	1/1:18,0:17:6.01:69,6,0	./.	0/1:17,1:18:8.42:185,0,8	0/0:15,0:13:3.01:0,3,37	0/0:7,0:8:9.03:0,9,123	0/0:11,0:11:9.02:0,9,102	0/0:10,0:13:7.68:0,8,112	0/1:28,1:32:22.61:23,0,366	1/1:19,0:19:3.01:60,3,0	0/0:12,0:12:9.03:0,9,198	0/0:14,0:13:3.01:0,3,70	0/0:45,0:44:36.12:0,36,761	0/0:20,0:21:9.03:0,9,113	1/1:11,1:12:3:30,3,0	1/1:18,1:20:3.01:39,3,0	1/1:7,1:8:3.48:61,3,0	1/1:11,1:11:3.01:60,3,0	0/0:28,0:28:21.07:0,21,372	1/1:14,1:14:3.01:40,3,0
chr10	38158909	.	A	AGT	1328.15	PASS	AB=0.794;AC=6;AF=0.107;AN=56;BaseQRankSum=-2.395;DP=583;FS=0.000;HRun=0;HaplotypeScore=105.0577;InbreedingCoeff=0.6435;MQ=60.91;MQ0=5;MQRankSum=2.594;QD=16.20;ReadPosRankSum=-0.325;VQSLOD=3.4016;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:70.73:0,71,808	0/0:8,0:8:21.07:0,21,256	0/0:27,0:8:11.10:0,11,103	0/0:24,0:6:5.33:0,5,77	0/0:25,0:24:55.94:0,56,381	0/0:25,0:25:54.16:0,54,648	0/0:17,0:19:41.96:0,42,490	0/0:34,0:34:72.20:0,72,850	0/0:15,0:15:35.17:0,35,229	0/0:26,0:26:57.17:0,57,687	0/0:23,0:23:57.18:0,57,696	0/1:7,9:16:3.18:213,0,3	0/0:11,0:11:20.33:0,20,131	0/0:12,0:12:29.49:0,29,201	0/1:17,1:18:7.28:7,0,214	0/0:26,0:26:32.03:0,32,342	0/0:23,0:22:53.21:0,53,374	0/0:17,0:17:36.58:0,37,440	0/0:29,0:29:57.17:0,57,684	0/0:22,0:22:51.16:0,51,619	0/0:22,0:22:57.18:0,57,696	0/0:9,0:9:11.62:0,12,76	1/1:11,8:19:31.03:443,31,0	1/1:7,22:29:19.18:796,19,0	0/0:25,0:25:66.21:0,66,806	0/0:24,0:24:51.16:0,51,623	0/0:24,0:24:66.14:0,66,753	0/0:2,0:2:6.02:0,6,73
chr10	38161106	.	TC	T	4850.02	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-1.654;DP=567;FS=7.964;HRun=2;HaplotypeScore=79.6539;InbreedingCoeff=0.9655;MQ=71.57;MQ0=1;MQRankSum=0.153;QD=13.62;ReadPosRankSum=-2.754;VQSLOD=2.6360;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,34:40:48.40:639,48,0	0/0:10,0:10:21.28:0,21,197	0/0:23,1:16:27.85:0,28,237	0/0:26,0:19:12.63:0,13,272	1/1:26,0:26:48.34:333,48,0	0/0:24,0:24:47.88:0,48,431	0/0:20,0:20:47.89:0,48,414	1/1:24,8:33:65.90:685,66,0	1/1:20,0:20:28.92:194,29,0	0/0:22,0:22:34.49:0,34,419	0/0:19,0:19:43.74:0,44,393	1/1:14,0:14:13.37:120,13,0	1/1:18,0:19:27.88:213,28,0	1/1:10,0:10:10.69:82,11,0	1/1:25,0:25:34.26:270,34,0	1/1:16,0:16:16.57:106,17,0	1/1:12,0:12:16.27:120,16,0	0/0:13,0:13:19.99:0,20,162	1/1:20,4:24:46.12:388,46,0	1/1:2,17:19:44.74:420,45,0	1/1:6,18:24:19.79:265,20,0	1/1:18,0:18:24.77:185,25,0	1/1:13,0:13:8.93:57,9,0	1/1:14,0:14:12.05:87,12,0	0/0:15,0:15:23.18:0,23,173	0/0:33,0:33:86.78:0,87,754	1/1:15,14:29:61.06:686,61,0	0/0:5,0:5:15:0,15,146
chr10	38161536	.	T	TC	18822.18	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=14.116;DP=766;FS=6.079;HRun=2;HaplotypeScore=97.2159;InbreedingCoeff=0.9999;MQ=86.23;MQ0=0;MQRankSum=-3.996;QD=39.38;ReadPosRankSum=1.116;VQSLOD=4.7473;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,46:50:99:1813,126,0	0/0:11,0:11:33.10:0,33,409	0/0:26,0:26:71.41:0,71,846	0/0:22,0:23:66.03:0,66,763	1/1:1,25:26:69.23:986,69,0	0/0:30,0:30:87.27:0,87,1078	0/0:37,0:37:99:0,99,1227	1/1:2,38:40:99:1588,114,0	1/1:1,40:41:99:1683,117,0	0/0:39,0:39:99:0,114,1405	0/0:27,0:27:75.23:0,75,920	1/1:0,26:26:75.12:1080,75,0	1/1:2,24:26:75.25:1073,75,0	1/1:1,22:23:57.19:820,57,0	1/1:1,28:29:84.28:1208,84,0	1/1:0,19:19:54.18:776,54,0	1/1:2,23:25:69.23:993,69,0	0/0:30,0:30:87.27:0,87,1077	1/1:1,22:23:66.19:929,66,0	1/1:0,24:24:72.24:1037,72,0	1/1:2,23:25:66.22:950,66,0	1/1:3,26:29:69.23:993,69,0	1/1:0,28:28:84.28:1209,84,0	1/1:0,28:28:75.25:1080,75,0	0/0:22,0:22:66.20:0,66,808	0/0:30,0:30:90.28:0,90,1106	1/1:1,15:16:42.14:604,42,0	0/0:13,0:13:30.09:0,30,372
chr10	38162376	.	GCCAGGAAAAGAAAGTC	G	28119.46	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=17.022;DP=659;FS=0.346;HRun=0;HaplotypeScore=307.1581;InbreedingCoeff=0.9789;MQ=82.98;MQ0=0;MQRankSum=-16.626;QD=65.85;ReadPosRankSum=3.685;VQSLOD=3.8026;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,39:47:72.25:3116,72,0	0/0:14,0:14:42.12:0,42,2743	0/0:28,0:29:66.22:0,66,3662	0/0:23,0:23:22.50:0,23,2689	1/1:3,14:17:22.15:996,22,0	0/0:17,0:17:51.16:0,51,3599	0/0:20,0:20:57.20:0,57,3958	1/1:19,23:42:68.84:1712,69,0	1/1:6,16:22:45.15:2066,45,0	0/0:24,0:24:66.22:0,66,4248	0/0:21,0:21:63.22:0,63,4712	1/1:6,19:25:39.13:1777,39,0	1/1:8,13:21:36.12:1656,36,0	1/1:6,19:25:45.15:2072,45,0	1/1:5,23:28:45.15:2029,45,0	1/1:8,23:31:48.16:2211,48,0	1/1:3,21:24:33.11:1520,33,0	0/0:24,0:24:49.25:0,49,4493	1/1:7,14:21:39.02:1124,39,0	1/1:5,12:17:30.10:1299,30,0	1/1:3,17:20:21.07:967,21,0	1/1:4,18:22:33.11:1515,33,0	1/1:4,13:17:24.08:1019,24,0	1/1:6,11:17:5.34:275,5,0	0/0:28,0:28:78.27:0,78,5238	0/0:27,0:27:66.23:0,66,4463	1/1:5,26:30:60.21:2764,60,0	0/0:5,0:5:15.05:0,15,1032
chr10	38163179	.	AAG	A	1606.45	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=11.342;DP=584;FS=6.315;HRun=0;HaplotypeScore=102.7275;InbreedingCoeff=0.9759;MQ=59.33;MQ0=35;MQRankSum=0.947;QD=7.58;ReadPosRankSum=1.761;VQSLOD=2.8284;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:34:90.15:0,90,1348	0/0:12,0:12:35.95:0,36,443	0/0:16,0:9:11.14:0,11,167	0/0:18,0:12:25.76:0,26,265	1/1:36,2:36:72.07:447,72,0	0/0:18,0:18:51.13:0,51,769	0/0:20,0:18:51.12:0,51,794	0/0:28,0:28:81.14:0,81,1196	1/1:17,0:17:25.14:118,25,0	0/0:26,0:25:72.16:0,72,1067	0/0:13,0:13:30.08:0,30,446	1/1:15,0:14:16.84:83,17,0	1/1:5,3:8:15.98:128,16,0	1/1:12,0:10:11.06:50,11,0	1/1:18,1:15:30.62:137,31,0	1/1:20,0:17:8.77:75,9,0	1/1:24,3:24:60.24:386,60,0	0/0:41,0:38:41.08:0,41,893	0/0:21,0:15:39.05:0,39,523	0/0:23,0:21:57.16:0,57,874	0/0:13,0:13:33.11:0,33,545	1/1:18,0:16:28.41:154,28,0	1/1:18,1:16:25.33:128,25,0	1/1:18,1:16:27.71:122,28,0	0/0:22,0:20:50.65:0,51,725	0/0:28,0:24:66.19:0,66,1012	0/0:24,0:21:63.15:0,63,923	0/0:13,0:13:35.98:0,36,511
chr10	38163180	.	AG	A	4546.84	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=5.655;DP=577;FS=2.785;HRun=1;HaplotypeScore=84.1656;InbreedingCoeff=0.9861;MQ=59.66;MQ0=31;MQRankSum=-0.363;QD=21.97;ReadPosRankSum=1.434;VQSLOD=5.0823;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:34:89.97:0,90,1068	0/0:13,0:13:35.87:0,36,359	0/0:16,0:9:11.11:0,11,134	0/0:18,0:12:15.81:0,16,202	1/1:6,32:36:83.56:890,84,0	0/0:18,0:18:51.12:0,51,616	0/0:19,0:17:51.04:0,51,615	0/0:29,0:29:84.12:0,84,978	1/1:1,16:17:27.05:349,27,0	0/0:26,0:25:72.12:0,72,858	0/0:13,0:13:30.07:0,30,359	1/1:2,13:14:20.99:245,21,0	1/1:5,3:8:21:221,21,0	1/1:2,10:10:11.91:167,12,0	1/1:4,15:16:33.11:458,33,0	1/1:4,14:16:24.05:313,24,0	1/1:11,16:24:65.99:776,66,0	0/0:41,0:38:41.16:0,41,702	0/0:20,0:15:39.04:0,39,436	0/0:23,0:21:54.07:0,54,659	0/0:13,0:13:33.11:0,33,426	1/1:3,13:15:35.86:388,36,0	1/1:5,14:16:26.94:326,27,0	1/1:4,14:16:30.10:414,30,0	0/0:21,0:19:50.72:0,51,558	0/0:27,0:23:66.19:0,66,810	0/0:24,0:21:63.10:0,63,726	0/0:13,0:13:35.97:0,36,411
chr10	38163586	.	AGGACTAAAAGGAAC	A	11200.53	PASS	AC=16;AF=0.296;AN=54;BaseQRankSum=15.117;DP=644;FS=12.656;HRun=0;HaplotypeScore=257.4623;InbreedingCoeff=0.9986;MQ=83.96;MQ0=0;MQRankSum=-13.206;QD=78.33;ReadPosRankSum=1.486;VQSLOD=3.2188;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,141,9104	1/1:1,10:11:24.08:1014,24,0	0/0:16,0:16:36.04:0,36,1604	0/0:28,0:28:68.44:0,68,3686	0/0:19,0:19:45.15:0,45,2875	1/1:3,17:20:39.13:1648,39,0	1/1:4,24:28:54.19:2279,54,0	0/0:33,0:33:96.32:0,96,5449	0/0:23,0:23:69.24:0,69,4183	1/1:6,16:22:45.08:1498,45,0	1/1:1,8:9:20.98:577,21,0	0/0:20,0:20:57.20:0,57,3409	0/0:22,0:22:60.21:0,60,3936	0/0:22,0:22:66.23:0,66,4315	0/0:23,0:23:69.24:0,69,4276	0/0:27,0:27:81.28:0,81,5417	0/0:39,0:39:99:0,111,7027	1/1:6,12:18:27.05:994,27,0	0/0:24,0:24:69.24:0,69,4072	0/0:23,0:23:69.24:0,69,4460	0/0:36,0:36:99:0,105,6603	0/0:19,0:19:57.20:0,57,3427	0/0:17,0:17:51.18:0,51,3261	0/0:34,0:34:99:0,102,6501	1/1:2,20:22:48.16:2028,48,0	1/1:3,10:13:30.08:1163,30,0	0/0:27,0:27:81.28:0,81,5498	./.
chr10	38164373	.	G	GGAA	557.98	PASS	AB=0.873;AC=13;AF=0.241;AN=54;BaseQRankSum=6.208;DP=231;FS=0.000;HRun=0;HaplotypeScore=51.2131;InbreedingCoeff=-0.1960;MQ=67.33;MQ0=2;MQRankSum=-4.577;QD=5.81;ReadPosRankSum=-0.272;VQSLOD=1.7581;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:13,1:14:49.98:50,0,324	0/1:2,1:2:18.69:48,0,19	0/0:20,0:12:5.21:0,5,411	0/0:12,0:10:23.42:0,23,345	./.	0/0:8,0:8:24.07:0,24,395	0/1:13,1:14:44.28:44,0,398	0/1:3,2:5:99:135,0,100	0/0:7,0:8:13.29:0,13,226	0/1:13,1:14:41.26:41,0,547	0/1:6,1:8:55.84:56,0,258	0/1:7,0:7:4.69:5,0,156	0/0:12,0:12:22.88:0,23,405	0/1:4,1:5:66.80:67,0,153	0/1:5,1:6:60.43:60,0,156	0/0:8,0:9:6.40:0,6,267	0/0:4,0:4:12.04:0,12,224	0/0:3,0:3:9.03:0,9,168	0/1:9,2:11:99:117,0,417	0/0:4,0:4:8.44:0,8,135	0/0:12,0:12:19.41:0,19,387	0/0:10,0:10:21.07:0,21,391	0/0:7,0:7:14.65:0,15,279	0/0:10,0:10:18.02:0,18,285	1/1:2,1:3:3.01:73,3,0	0/0:8,0:8:23.97:0,24,407	0/1:6,0:6:6.65:7,0,156	0/0:1,0:1:3.01:0,3,56
chr10	38166166	.	TAA	T	4858.52	PASS	AB=0.565;AC=29;AF=0.518;AN=56;BaseQRankSum=-9.999;DP=367;FS=2.075;HRun=11;HaplotypeScore=58.5047;InbreedingCoeff=0.8745;MQ=69.20;MQ0=3;MQRankSum=0.216;QD=21.79;ReadPosRankSum=-0.749;VQSLOD=3.9672;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,21:23:54.13:575,54,0	0/0:2,0:5:4.99:0,5,17	0/0:10,0:8:21.05:0,21,236	0/0:8,0:8:2.67:0,3,46	1/1:3,20:23:32.59:532,33,0	0/0:0,0:15:29.94:0,30,103	0/0:1,0:6:9.98:0,10,34	1/1:5,20:25:57.09:592,57,0	1/1:0,10:10:21.04:223,21,0	0/0:2,0:9:17.47:0,17,60	0/0:1,0:9:12.48:0,12,43	0/0:2,0:10:22.97:0,23,113	1/1:3,4:6:9.02:96,9,0	1/1:1,8:9:24.06:256,24,0	1/1:2,13:15:30.07:319,30,0	1/1:2,9:10:24.06:256,24,0	1/1:4,22:26:57.13:606,57,0	0/0:2,1:27:28.42:0,28,173	1/1:3,18:20:54.13:572,54,0	1/1:2,7:9:18.04:191,18,0	1/1:2,10:12:21.05:224,21,0	1/1:2,6:8:12.01:126,12,0	0/0:3,0:6:10.50:0,10,70	0/0:2,0:11:26.87:0,27,91	0/0:1,0:15:27.45:0,27,94	0/1:3,1:13:3.31:3,0,73	1/1:1,9:10:27.07:287,27,0	0/0:3,0:13:22.33:0,22,76
chr10	38166536	.	A	ACG	2439.52	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=-4.848;DP=409;FS=39.088;HRun=0;HaplotypeScore=98.5548;InbreedingCoeff=0.4290;MQ=46.87;MQ0=11;MQRankSum=0.663;QD=11.79;ReadPosRankSum=4.130;VQSLOD=1.7148;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,23:23:33.11:601,33,0	0/0:6,0:6:11.90:0,12,93	0/0:17,0:9:21.04:0,21,250	0/0:23,0:12:32.89:0,33,309	0/1:13,0:12:72.85:73,0,121	0/0:21,0:20:32.61:0,33,229	0/0:18,0:17:19.80:0,20,142	1/1:3,20:22:48.48:500,48,0	0/1:11,0:11:49.61:50,0,56	0/0:17,0:16:36.27:0,36,287	0/0:12,0:12:17.92:0,18,142	0/0:12,0:11:17.78:0,18,123	0/1:9,0:9:6.63:7,0,104	1/1:12,0:13:1.26:66,1,0	0/1:18,0:18:68.29:68,0,133	0/1:11,0:11:26.04:115,0,26	0/1:15,0:15:35.01:50,0,35	0/0:9,0:9:20.76:0,21,141	1/1:15,3:13:35.64:379,36,0	1/1:2,11:14:18.06:292,18,0	1/1:3,16:18:6.02:110,6,0	0/1:10,0:10:2.06:2,0,124	0/0:15,0:15:14.98:0,15,124	0/0:11,0:11:14.49:0,14,92	0/0:14,0:13:24.71:0,25,188	0/0:22,0:22:53.68:0,54,437	1/1:4,5:9:23.36:317,23,0	0/0:5,0:5:10.71:0,11,70
chr10	38166561	.	T	TAC	2001.43	PASS	AB=0.952;AC=38;AF=0.760;AN=50;BaseQRankSum=0.179;DP=403;FS=1.104;HRun=0;HaplotypeScore=146.5968;InbreedingCoeff=-0.0787;MQ=37.73;MQ0=37;MQRankSum=0.171;QD=5.97;ReadPosRankSum=0.146;VQSLOD=3.3897;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:19,0:19:0:0,0,0	1/1:10,1:11:17.60:175,18,0	./.	./.	1/1:12,0:10:2.23:21,2,0	0/1:24,3:26:53.68:274,0,54	1/1:17,4:20:12.01:128,12,0	0/1:18,0:10:13.97:14,0,30	0/0:16,0:16:0.57:0,1,1	0/1:15,1:15:48.48:104,0,48	1/1:10,1:11:9.01:91,9,0	1/1:15,0:14:24.88:203,25,0	0/0:10,0:10:1.88:0,2,7	1/1:14,0:13:2.94:18,3,0	1/1:15,0:15:6.93:93,7,0	1/1:15,0:15:9.43:81,9,0	1/1:13,0:13:1.67:16,2,0	0/1:8,2:10:7.05:135,0,7	0/1:16,0:11:14.70:18,0,15	1/1:11,0:11:5.99:61,6,0	1/1:15,0:12:2.96:19,3,0	1/1:6,0:6:5.99:51,6,0	./.	1/1:12,0:11:5.85:50,6,0	1/1:13,1:12:9.69:167,10,0	0/1:28,2:29:3.70:329,0,4	1/1:9,0:9:2.45:26,2,0	0/1:5,0:5:24.42:49,0,24
chr10	38166563	.	CACACACACACACACACAAAT	C	3515.28	PASS	AB=1.000;AC=36;AF=0.667;AN=54;BaseQRankSum=1.522;DP=409;FS=8.217;HRun=0;HaplotypeScore=214.6166;InbreedingCoeff=0.4890;MQ=37.16;MQ0=37;MQRankSum=-3.046;QD=13.02;ReadPosRankSum=-3.277;VQSLOD=0.8469;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:18:14.36:168,14,0	0/1:11,0:11:8.65:9,0,198	0/0:14,0:2:3.01:0,3,32	./.	1/1:11,0:9:5.99:54,6,0	0/0:28,0:27:13.28:0,13,903	0/1:22,0:21:67.11:67,0,91	0/1:18,0:9:46.84:47,0,91	1/1:16,0:16:25.37:497,25,0	0/0:16,0:15:8.42:0,8,746	0/1:11,0:11:15.73:16,0,120	1/1:15,1:15:27.12:366,27,0	1/1:10,0:10:12.04:225,12,0	1/1:15,0:14:12.41:146,12,0	1/1:13,1:14:20.19:237,20,0	1/1:15,2:17:27.62:515,28,0	1/1:14,0:14:10.16:148,10,0	0/0:11,0:11:15.77:0,16,338	1/1:14,0:10:16.25:294,16,0	1/1:12,0:11:14.45:155,14,0	1/1:15,0:12:7.43:103,7,0	1/1:6,0:5:9.01:107,9,0	1/1:8,0:8:3.01:32,3,0	1/1:13,0:12:5.02:45,5,0	0/0:14,0:12:2.21:0,2,750	0/0:30,0:29:31.61:0,32,1649	1/1:8,1:9:14.08:283,14,0	0/0:5,0:5:10.80:0,11,67
chr10	38166569	.	CACACACACACAAAT	C	1201.99	PASS	AB=1.000;AC=32;AF=0.593;AN=54;BaseQRankSum=4.200;DP=404;FS=2.003;HRun=0;HaplotypeScore=193.0941;InbreedingCoeff=0.2498;MQ=35.83;MQ0=38;MQRankSum=-5.234;QD=4.55;ReadPosRankSum=-1.290;VQSLOD=2.7757;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:3.51:0,4,8	0/0:9,0:9:4.97:0,5,314	0/0:16,0:1:3.01:0,3,54	./.	1/1:7,0:6:5.95:48,6,0	0/0:28,0:27:23.10:0,23,940	0/1:24,0:22:36.51:37,0,187	0/1:18,0:9:1.93:2,0,305	1/1:16,0:16:9.58:245,10,0	0/1:18,0:17:30.46:30,0,875	0/1:11,0:11:3.46:3,0,147	1/1:14,2:15:7.89:70,8,0	1/1:10,0:10:12.27:98,12,0	1/1:13,1:13:2.74:28,3,0	1/1:11,1:12:8.92:73,9,0	1/1:18,0:18:8.31:162,8,0	0/1:12,0:12:26.31:26,0,31	0/1:12,0:12:12.09:12,0,401	1/1:13,0:11:19.79:195,20,0	1/1:12,0:11:6.58:52,7,0	1/1:15,0:12:3.74:20,4,0	1/1:5,0:4:2.64:32,3,0	1/1:7,0:7:0.89:2,1,0	0/0:14,1:14:1.14:0,1,3	0/1:14,0:12:2.41:2,0,632	0/0:28,0:27:27.80:0,28,1400	0/1:10,0:10:2.36:224,0,2	0/0:6,0:6:16.60:0,17,215
chr10	38166609	.	G	GAGAGAC	5460.78	PASS	AB=0.769;AC=23;AF=0.500;AN=46;BaseQRankSum=5.722;DP=513;FS=4.217;HRun=0;HaplotypeScore=198.1780;InbreedingCoeff=0.8561;MQ=41.63;MQ0=14;MQRankSum=-8.868;QD=25.40;ReadPosRankSum=-0.340;VQSLOD=4.3578;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:14,6:18:0:0,0,0	0/0:9,0:9:21.04:0,21,361	0/0:39,0:14:27.37:0,27,376	0/0:35,0:15:30.02:0,30,497	1/1:6,4:7:3.01:86,3,0	0/0:25,0:24:49.02:0,49,919	0/0:21,0:20:27.09:0,27,538	1/1:18,11:28:51.01:1304,51,0	1/1:15,4:18:18.06:499,18,0	0/0:24,0:23:63.20:0,63,1267	0/0:13,0:13:27.08:0,27,538	1/1:20,2:22:8.92:290,9,0	1/1:4,10:14:12.04:358,12,0	1/1:14,2:16:3.01:70,3,0	./.	1/1:20,3:24:29.69:643,30,0	1/1:8,2:9:15.05:400,15,0	0/0:11,0:11:32.70:0,33,620	1/1:14,4:14:30.08:813,30,0	1/1:12,2:14:6.02:170,6,0	./.	./.	./.	./.	0/0:18,0:18:38.94:0,39,739	0/0:26,0:25:66.19:0,66,1320	1/1:12,5:16:30.06:827,30,0	0/0:9,0:8:5.85:0,6,437
chr10	38166619	.	GACAC	G	1063.72	PASS	AB=0.940;AC=21;AF=0.438;AN=48;BaseQRankSum=8.136;DP=537;FS=0.000;HRun=0;HaplotypeScore=204.4147;InbreedingCoeff=0.3725;MQ=41.65;MQ0=13;MQRankSum=-6.597;QD=4.03;ReadPosRankSum=0.117;VQSLOD=2.1108;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:15,5:17:0:1,0,0	0/0:10,0:10:26.86:0,27,579	0/0:37,0:13:35.77:0,36,659	0/0:41,0:15:33.52:0,34,703	1/1:12,0:10:2.90:36,3,0	0/0:26,0:26:57.20:0,57,1397	0/0:20,0:18:30.10:0,30,808	0/1:30,0:29:99:296,0,197	1/1:18,0:19:5.81:59,6,0	0/0:26,0:25:72.24:0,72,1868	0/0:13,0:13:27.09:0,27,668	1/1:20,0:21:4.84:60,5,0	1/1:15,0:15:3.73:50,4,0	1/1:16,0:17:1.55:4,2,0	0/1:21,0:20:0:0,0,0	0/1:24,0:24:26.01:26,0,122	1/1:7,1:8:11.83:86,12,0	0/0:11,0:11:32.70:0,33,814	0/1:20,3:19:99:355,0,147	1/1:13,6:17:9.03:104,9,0	./.	./.	./.	./.	0/0:20,0:20:47.90:0,48,1122	0/0:25,0:24:66.23:0,66,1696	0/1:20,2:20:99:133,0,181	0/1:9,0:8:10.24:10,0,542
chr10	38166625	.	CAG	C	175.47	PASS	AB=0.948;AC=8;AF=0.167;AN=48;BaseQRankSum=5.291;DP=529;FS=1.578;HRun=0;HaplotypeScore=192.2171;InbreedingCoeff=0.3127;MQ=42.33;MQ0=17;MQRankSum=-4.734;QD=1.44;ReadPosRankSum=-3.481;VQSLOD=1.7392;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:21,1:17:0.03:0,0,0	0/0:10,0:10:14.01:0,14,361	0/0:29,0:11:20.93:0,21,340	0/0:37,0:14:27.51:0,28,341	1/1:15,0:12:2.84:18,3,0	0/0:26,0:26:54.15:0,54,880	0/0:21,0:19:36.10:0,36,580	0/0:26,0:25:18.22:0,18,280	0/0:19,0:18:10.67:0,11,103	0/0:30,0:27:75.23:0,75,1229	0/0:14,0:14:27.08:0,27,450	0/1:20,0:19:3.36:3,0,50	0/0:14,0:14:0.19:0,0,49	0/0:19,0:19:2.88:0,3,15	0/0:21,0:20:2.89:0,3,24	0/0:25,0:25:32.39:0,32,210	0/0:9,0:7:11.54:0,12,82	0/0:14,0:14:33.91:0,34,540	0/1:22,2:19:69.02:142,0,69	1/1:19,1:18:8.46:56,8,0	./.	./.	./.	./.	0/0:19,0:19:39.02:0,39,648	0/0:26,0:25:69.18:0,69,1126	0/1:19,2:19:70.95:71,0,101	0/0:9,0:8:22.32:0,22,372
chr10	38166631	.	GAC	G	83.55	PASS	AB=0.993;AC=12;AF=0.231;AN=52;BaseQRankSum=6.795;DP=531;FS=0.000;HRun=0;HaplotypeScore=191.1063;InbreedingCoeff=0.2144;MQ=39.52;MQ0=17;MQRankSum=-6.567;QD=0.44;ReadPosRankSum=-1.885;VQSLOD=2.2141;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:18:0.14:0,0,0	0/0:9,1:10:3.83:0,4,380	0/0:20,0:9:21.04:0,21,349	0/0:33,0:11:23.29:0,23,316	1/1:15,0:12:1.14:3,1,0	0/0:26,0:25:54.17:0,54,975	0/0:22,0:20:36.12:0,36,671	0/1:27,0:26:23.86:24,0,64	0/0:19,0:18:12.63:0,13,41	0/0:29,0:26:75.21:0,75,1354	0/0:18,0:18:30.08:0,30,534	0/0:20,0:19:5.52:0,6,16	0/0:15,0:15:5.86:0,6,20	1/1:17,1:18:2.90:17,3,0	0/0:19,1:19:2.86:0,3,19	0/1:23,1:24:26.36:26,0,55	0/0:9,0:7:1.90:0,2,53	0/0:17,0:17:28.04:0,28,613	0/1:25,0:20:47.01:47,0,62	1/1:23,0:22:1.09:31,1,0	0/1:10,0:9:0:0,0,0	./.	./.	0/0:19,0:19:0:0,0,0	0/0:18,0:18:39:0,39,664	0/0:24,0:24:72.16:0,72,1244	0/1:25,0:23:46.13:55,0,46	0/0:8,0:7:21.07:0,21,379
chr10	38166633	.	C	CAGAG	1955.75	PASS	AB=0.964;AC=21;AF=0.404;AN=52;BaseQRankSum=8.945;DP=530;FS=2.491;HRun=0;HaplotypeScore=194.9055;InbreedingCoeff=0.4287;MQ=39.49;MQ0=17;MQRankSum=-8.874;QD=7.14;ReadPosRankSum=-0.460;VQSLOD=2.9101;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:22,1:18:0.01:0,0,0	0/0:10,0:10:24.44:0,24,394	0/0:20,0:8:11.22:0,11,252	0/0:32,0:10:14.73:0,15,219	1/1:16,0:13:0.67:2,1,0	0/0:25,0:24:54.15:0,54,916	0/0:22,0:20:36.12:0,36,649	1/1:27,0:26:31.64:800,32,0	0/1:18,0:17:7.07:7,0,24	0/0:28,0:25:69.22:0,69,1218	0/0:17,0:17:30.10:0,30,536	1/1:17,0:19:13.67:76,14,0	1/1:17,0:17:13.02:51,13,0	1/1:17,0:17:5.78:32,6,0	0/0:20,0:19:3.84:0,4,21	1/1:23,0:23:11.31:132,11,0	0/1:9,0:7:35.21:37,0,35	0/0:18,0:18:33.71:0,34,619	0/1:24,2:21:67.10:471,0,67	0/1:24,0:23:19.82:30,0,20	0/1:10,0:9:0:0,0,0	./.	./.	1/1:19,0:19:0.47:1,0,0	0/0:18,0:18:32.94:0,33,596	0/0:25,0:25:66.13:0,66,1101	0/1:21,4:23:16.19:480,0,16	0/0:8,0:7:21.07:0,21,370
chr10	38166637	.	GAC	G	1121.95	PASS	AB=0.815;AC=12;AF=0.231;AN=52;BaseQRankSum=5.880;DP=515;FS=0.583;HRun=0;HaplotypeScore=176.6304;InbreedingCoeff=0.3509;MQ=37.86;MQ0=17;MQRankSum=-7.086;QD=6.64;ReadPosRankSum=-1.290;VQSLOD=2.9609;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:8,15:18:0.32:0,0,0	0/0:9,1:10:9.83:0,10,393	0/0:17,0:7:11.22:0,11,249	0/0:28,0:8:14.73:0,15,208	1/1:14,0:12:0.37:1,0,0	0/0:25,0:24:54.14:0,54,988	0/0:21,0:19:36.12:0,36,683	1/1:18,9:26:0.83:509,1,0	0/0:18,0:17:2.81:0,3,94	0/0:28,0:24:72.18:0,72,1304	0/0:18,0:18:33.09:0,33,602	0/0:18,0:17:14.78:0,15,131	0/1:17,0:17:1.58:2,0,91	0/1:17,1:18:12.22:12,0,27	0/0:17,2:18:1.46:0,1,4	0/0:22,0:22:16.22:0,16,268	0/1:8,1:7:18.18:18,0,113	0/0:19,0:19:22.97:0,23,838	0/1:18,9:22:1.86:370,0,2	1/1:12,12:23:5.53:42,6,0	0/1:5,6:9:0:0,0,0	./.	./.	0/0:15,0:18:0:0,0,0	0/0:17,0:17:33:0,33,636	0/0:23,0:23:66.20:0,66,1189	0/1:10,12:20:1.22:288,0,1	0/0:8,0:7:21.07:0,21,403
chr10	38166641	.	GAGAC	G	935.24	PASS	AB=0.995;AC=15;AF=0.278;AN=54;BaseQRankSum=6.945;DP=507;FS=0.000;HRun=0;HaplotypeScore=178.7508;InbreedingCoeff=0.2423;MQ=38.25;MQ0=18;MQRankSum=-7.444;QD=4.75;ReadPosRankSum=-0.091;VQSLOD=2.5488;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:18:0.27:0,0,0	0/1:10,0:10:4.16:4,0,452	0/0:17,0:7:8.02:0,8,131	0/0:26,0:5:8.45:0,8,81	0/1:12,0:11:0:0,0,0	0/0:26,0:25:53.17:0,53,1167	0/0:20,0:18:33.05:0,33,667	1/1:21,6:25:31.13:446,31,0	0/1:15,0:14:2.97:3,0,32	0/0:29,0:25:72.23:0,72,1473	0/0:19,0:19:35.99:0,36,824	0/0:17,0:16:3.68:0,4,78	1/1:16,0:16:0.60:5,1,0	1/1:18,0:18:5.91:47,6,0	1/1:19,0:18:2.15:7,2,0	0/1:23,0:23:62.93:146,0,63	0/1:9,0:6:24.85:66,0,25	0/0:19,0:19:37.13:0,37,1015	0/1:25,1:22:99:174,0,193	0/0:22,0:21:0.64:0,1,76	0/0:11,0:9:0:0,0,0	./.	0/0:9,0:9:0.47:0,0,1	0/0:18,0:18:0.47:0,0,1	0/0:16,0:16:35.67:0,36,858	0/0:24,0:24:62.01:0,62,1308	0/1:22,0:20:99:174,0,127	0/0:8,0:7:21.07:0,21,465
chr10	38166643	.	GAC	G	263.29	PASS	AB=0.928;AC=13;AF=0.241;AN=54;BaseQRankSum=7.295;DP=499;FS=6.874;HRun=0;HaplotypeScore=167.5322;InbreedingCoeff=0.0597;MQ=38.38;MQ0=17;MQRankSum=-5.751;QD=1.38;ReadPosRankSum=-1.661;VQSLOD=1.9667;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:18:0.31:0,0,0	0/0:10,0:10:9.44:0,9,347	0/0:15,0:6:8.02:0,8,86	0/0:25,0:5:1.86:0,2,40	0/0:9,3:11:0:0,0,0	0/0:25,0:24:42.12:0,42,864	0/0:20,0:18:33.05:0,33,532	0/1:28,0:24:36.24:109,0,36	0/1:7,6:12:30.57:31,0,52	0/0:29,0:25:72.17:0,72,1232	0/0:19,0:19:35.99:0,36,648	0/0:14,2:16:8.73:0,9,55	0/1:16,1:17:21.92:27,0,22	0/1:18,0:18:7.77:13,0,8	1/1:15,4:18:2.98:40,3,0	0/1:19,4:23:75.23:85,0,75	0/1:6,1:4:8.55:9,0,47	0/0:20,0:20:38.69:0,39,877	0/1:26,0:22:7.40:7,0,247	0/0:22,0:21:2.53:0,3,47	0/1:10,0:8:0:0,0,0	./.	1/1:7,1:8:3.01:41,3,0	0/0:18,0:18:0:0,0,0	0/0:17,0:17:35.74:0,36,640	0/0:23,0:23:46.80:0,47,1002	0/1:22,0:20:35.34:35,0,86	0/0:7,0:7:21.07:0,21,377
chr10	38166645	.	CAG	C	136.49	PASS	AB=0.995;AC=13;AF=0.260;AN=50;BaseQRankSum=6.208;DP=505;FS=3.981;HRun=0;HaplotypeScore=167.1739;InbreedingCoeff=0.2111;MQ=38.14;MQ0=17;MQRankSum=-5.283;QD=0.75;ReadPosRankSum=1.764;VQSLOD=2.0261;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/0:11,0:11:20.40:0,20,303	./.	./.	0/0:12,0:11:0:0,0,0	0/0:24,0:23:47.16:0,47,736	0/0:18,0:16:24.08:0,24,411	0/1:30,0:24:77.44:77,0,104	0/1:14,0:13:12.63:13,0,61	0/0:28,0:24:60.20:0,60,979	0/0:22,0:20:39.12:0,39,631	0/0:16,0:15:13.22:0,13,83	0/0:17,0:17:7.80:0,8,52	1/1:17,0:17:0.94:3,1,0	1/1:20,0:19:3.74:17,4,0	0/1:24,0:24:6.91:7,0,177	0/1:7,0:4:0.80:1,0,47	0/0:18,0:18:49.72:0,50,821	0/1:26,1:24:13.09:13,0,442	0/0:19,3:21:5.97:0,6,92	0/1:11,0:9:0:0,0,0	0/0:6,0:6:0:0,0,0	1/1:8,0:8:2.94:18,3,0	0/0:18,0:18:0:0,0,0	0/0:18,0:18:35.98:0,36,569	0/0:24,0:24:58.92:0,59,894	0/1:19,0:21:99:109,0,155	0/0:7,0:7:21.05:0,21,325
chr10	38166653	.	GAC	G	631.39	PASS	AB=0.871;AC=14;AF=0.269;AN=52;BaseQRankSum=7.287;DP=514;FS=27.955;HRun=0;HaplotypeScore=166.0165;InbreedingCoeff=0.0899;MQ=38.66;MQ0=17;MQRankSum=-5.522;QD=2.91;ReadPosRankSum=0.726;VQSLOD=0.8469;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:17,7:19:2.34:0,2,6	0/0:10,0:10:0.61:0,1,267	./.	./.	0/0:8,3:10:0:0,0,0	0/0:23,0:21:45.03:0,45,788	0/0:20,0:18:36.04:0,36,532	0/1:28,3:24:99:119,0,245	0/1:12,5:16:23.89:53,0,24	0/0:27,0:23:59.44:0,59,858	0/0:25,0:23:42.10:0,42,703	0/1:16,1:16:22.37:27,0,22	0/1:15,0:14:6.91:31,0,7	1/1:13,5:18:5.86:35,6,0	1/1:19,4:22:6.45:65,6,0	0/1:21,4:25:55.66:93,0,56	0/1:7,1:5:29.99:30,0,43	0/0:21,0:21:42.18:0,42,946	0/1:24,4:24:74.13:74,0,556	0/0:18,6:23:11.80:0,12,169	0/0:13,1:12:2.81:0,3,24	0/0:5,0:5:0:0,0,0	1/1:9,1:10:8.13:60,8,0	0/0:19,0:19:2.98:0,3,22	0/0:20,0:20:35.99:0,36,638	0/0:23,0:23:49.99:0,50,977	0/1:15,10:23:99:191,0,231	0/0:7,0:7:19.27:0,19,276
chr10	38166655	.	C	CAG	487.49	PASS	AB=0.992;AC=15;AF=0.326;AN=46;BaseQRankSum=8.092;DP=518;FS=13.902;HRun=0;HaplotypeScore=173.8096;InbreedingCoeff=0.4638;MQ=39.05;MQ0=17;MQRankSum=-6.117;QD=2.34;ReadPosRankSum=0.902;VQSLOD=1.8062;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:10,0:10:17.66:0,18,193	./.	./.	./.	0/0:22,0:20:42.01:0,42,537	0/0:19,0:17:30.10:0,30,384	0/1:30,0:23:42.67:43,0,203	1/1:17,0:16:5.30:44,5,0	0/0:28,0:24:50.87:0,51,570	0/0:25,0:23:39:0,39,485	0/0:18,0:17:8.83:0,9,61	1/1:12,5:16:12.34:117,12,0	1/1:14,4:18:5.85:49,6,0	0/1:23,1:23:0.12:26,0,0	1/1:23,2:25:11.68:185,12,0	1/1:8,1:6:8.30:92,8,0	0/0:23,0:22:54.62:0,55,681	0/1:30,0:26:5.15:5,0,403	0/0:24,0:23:11.83:0,12,148	0/0:14,0:12:2.80:0,3,38	./.	0/1:11,0:11:2.06:2,0,9	0/0:19,0:19:2.88:0,3,37	0/0:18,0:18:36.01:0,36,462	0/0:23,0:23:59.77:0,60,698	0/1:27,0:25:77.29:77,0,195	0/0:7,0:7:12.03:0,12,151
chr10	38166659	.	G	GAGAC	199.61	PASS	AB=0.972;AC=10;AF=0.192;AN=52;BaseQRankSum=5.343;DP=516;FS=5.136;HRun=0;HaplotypeScore=194.1039;InbreedingCoeff=-0.0273;MQ=39.53;MQ0=15;MQRankSum=-3.209;QD=1.24;ReadPosRankSum=-0.678;VQSLOD=2.4956;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:19:0.21:1,0,0	0/0:9,0:9:17.75:0,18,296	./.	./.	0/0:14,0:13:2.87:0,3,24	0/0:21,0:19:42.14:0,42,747	0/0:20,0:18:36.09:0,36,589	0/0:33,0:27:17.18:0,17,623	0/1:15,1:15:14.39:14,0,22	0/0:26,0:22:51.17:0,51,888	0/0:26,0:24:39.13:0,39,705	0/1:18,0:17:42.08:42,0,88	1/1:15,1:15:1.34:50,1,0	0/1:20,0:20:11.43:40,0,11	0/1:23,1:23:17.71:26,0,18	0/1:23,1:24:55.58:102,0,56	0/1:9,0:6:47.30:47,0,59	0/0:24,0:23:56.56:0,57,993	0/0:29,0:26:67.63:0,68,923	0/0:23,0:22:11.51:0,12,209	0/0:14,0:12:3:0,3,48	0/0:7,0:7:2.98:0,3,21	0/1:10,1:11:2.34:2,0,49	0/0:19,0:19:2.71:0,3,46	0/0:18,0:18:35.91:0,36,660	0/0:26,0:25:67.52:0,68,1082	0/0:27,0:25:12.29:0,12,484	0/0:8,0:8:17.98:0,18,265
chr10	38166663	.	GAC	G	495.58	PASS	AB=0.994;AC=17;AF=0.327;AN=52;BaseQRankSum=8.431;DP=507;FS=41.275;HRun=0;HaplotypeScore=168.8689;InbreedingCoeff=0.3497;MQ=39.73;MQ0=15;MQRankSum=-5.801;QD=2.37;ReadPosRankSum=0.595;VQSLOD=1.2375;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:17:2.34:0,2,7	0/1:11,0:11:14.34:14,0,167	./.	./.	0/1:14,0:13:0.11:0,0,0	0/0:20,0:18:41.67:0,42,621	0/0:19,0:17:36.01:0,36,476	0/0:31,1:26:11.48:0,11,690	1/1:14,0:13:8.95:82,9,0	0/0:21,0:18:33.75:0,34,656	0/0:26,0:24:38.94:0,39,570	0/1:17,0:16:36.71:46,0,37	1/1:17,0:16:10.78:77,11,0	1/1:19,0:19:8.49:46,8,0	1/1:24,0:22:4.85:70,5,0	1/1:21,1:22:34.12:194,34,0	0/1:10,0:7:24.20:46,0,24	0/0:25,0:24:43.64:0,44,748	0/0:31,1:29:15.22:0,15,794	0/1:22,1:22:3.98:4,0,192	0/0:18,1:17:5.81:0,6,81	0/0:8,0:8:2.50:0,2,9	0/1:11,0:11:6.57:20,0,7	0/0:18,0:18:4.23:0,4,27	0/0:18,0:18:33.85:0,34,531	0/0:26,0:25:51.11:0,51,932	0/1:27,0:25:59.36:59,0,368	0/0:8,0:8:17.96:0,18,221
chr10	38166665	.	C	CAG	236.46	PASS	AB=1.000;AC=17;AF=0.327;AN=52;BaseQRankSum=3.094;DP=509;FS=16.107;HRun=0;HaplotypeScore=170.3168;InbreedingCoeff=0.5719;MQ=40.21;MQ0=15;MQRankSum=-1.946;QD=1.43;ReadPosRankSum=-1.296;VQSLOD=1.5433;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:19:0:0,0,0	0/0:11,0:11:14.69:0,15,162	./.	./.	1/1:17,0:16:2.02:6,2,0	0/0:20,0:18:35.99:0,36,459	0/0:17,0:15:30.10:0,30,383	0/0:35,0:29:56.35:0,56,627	1/1:15,0:14:4.71:28,5,0	0/0:21,0:18:47.91:0,48,541	0/0:27,0:25:32.96:0,33,394	0/1:17,0:16:8.87:9,0,24	1/1:13,3:15:10.25:72,10,0	1/1:17,2:19:3.61:11,4,0	1/1:19,1:18:5.15:81,5,0	1/1:20,1:21:3.69:142,4,0	0/1:10,0:7:19.99:20,0,47	0/0:28,0:27:51.13:0,51,637	0/0:31,0:28:60.71:0,61,749	0/0:22,0:21:11.93:0,12,155	0/0:19,0:17:5.70:0,6,74	1/1:8,0:8:2.95:19,3,0	0/0:11,0:11:10.30:0,10,43	0/0:19,0:19:8.45:0,8,49	0/0:18,0:18:33:0,33,417	0/0:27,0:26:65.69:0,66,742	0/0:27,0:25:35.93:0,36,434	0/0:7,0:7:12.04:0,12,148
chr10	38166673	.	GAC	G	1274.09	PASS	AB=0.989;AC=31;AF=0.596;AN=52;BaseQRankSum=5.045;DP=519;FS=24.473;HRun=0;HaplotypeScore=153.7599;InbreedingCoeff=-0.1643;MQ=40.80;MQ0=12;MQRankSum=2.606;QD=3.13;ReadPosRankSum=2.292;VQSLOD=1.0817;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:20:1.76:41,2,0	0/1:11,0:11:25.57:56,0,26	./.	./.	1/1:18,0:17:5.73:39,6,0	0/1:17,0:16:19:19,0,153	0/1:15,0:13:27.76:28,0,70	0/0:37,0:31:75.26:0,75,531	1/1:17,0:16:17.90:151,18,0	0/1:18,1:17:72.67:73,0,185	0/1:25,0:23:22.81:23,0,96	1/1:18,0:17:1.24:111,1,0	1/1:18,0:17:13.76:101,14,0	1/1:19,0:19:5.54:28,6,0	1/1:22,0:20:13.40:129,13,0	1/1:24,0:24:43.12:268,43,0	0/1:11,0:8:16.56:42,0,17	0/1:29,0:28:61.39:61,0,90	0/0:34,0:31:43.40:0,43,633	0/1:19,0:18:14.88:15,0,157	0/1:19,0:17:15.53:16,0,84	0/0:8,0:8:2.84:0,3,14	1/1:11,1:12:3.13:87,3,0	0/1:19,2:21:21.80:60,0,22	0/1:17,0:17:9.66:10,0,115	0/1:25,0:24:40.73:41,0,246	0/0:28,0:26:14.19:0,14,447	0/1:8,0:8:30.86:38,0,31
chr10	38166675	.	CAG	C	1776.83	PASS	AB=0.941;AC=26;AF=0.464;AN=56;BaseQRankSum=-1.090;DP=516;FS=0.674;HRun=0;HaplotypeScore=135.1996;InbreedingCoeff=0.1021;MQ=40.97;MQ0=13;MQRankSum=3.124;QD=5.06;ReadPosRankSum=3.592;VQSLOD=3.1503;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:21:1.97:0,2,6	1/1:7,4:11:11.99:120,12,0	0/0:6,0:2:4.25:0,4,31	0/0:4,0:1:3:0,3,25	0/0:18,0:17:5.10:0,5,33	1/1:12,4:16:15.04:168,15,0	1/1:7,8:13:18.05:202,18,0	0/0:38,0:32:27.01:0,27,314	0/1:18,0:17:15.13:22,0,15	1/1:13,6:17:21.06:232,21,0	1/1:14,8:22:17.72:162,18,0	0/1:16,0:15:2.63:3,0,40	0/0:16,0:15:0.96:0,1,3	0/0:17,0:17:2.37:0,2,8	0/1:21,0:19:15.51:16,0,28	0/0:24,0:24:0.67:0,1,17	0/0:10,0:7:6.46:0,6,59	1/1:6,21:27:32.93:350,33,0	0/1:29,3:30:67.34:67,0,322	0/1:18,1:18:21.13:21,0,126	0/1:19,2:19:18:18,0,122	0/0:8,0:8:3.01:0,3,38	0/1:12,0:12:12.79:13,0,48	0/1:21,0:21:20.49:20,0,72	1/1:13,3:17:14.87:148,15,0	0/1:14,10:24:21.16:232,0,21	0/1:27,2:27:40.20:40,0,274	1/1:3,3:6:11.77:111,12,0
chr10	38168184	.	CAA	C	4625.36	PASS	AB=0.967;AC=30;AF=0.536;AN=56;BaseQRankSum=9.556;DP=607;FS=9.530;HRun=3;HaplotypeScore=112.6210;InbreedingCoeff=0.8086;MQ=60.19;MQ0=8;MQRankSum=-0.968;QD=15.27;ReadPosRankSum=-3.154;VQSLOD=0.5933;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:25:10.75:131,11,0	0/0:8,0:8:24.08:0,24,462	0/0:49,0:29:25.31:0,25,722	0/0:41,0:22:37.52:0,38,531	1/1:17,8:24:62.85:625,63,0	0/0:36,0:36:99:0,102,1484	0/0:28,0:28:80.23:0,80,1205	1/1:22,0:21:18.02:278,18,0	1/1:8,6:14:21.92:388,22,0	0/0:22,0:22:66.12:0,66,1027	0/0:20,0:20:60.17:0,60,1061	1/1:16,0:16:7.06:138,7,0	1/1:8,7:15:24.90:438,25,0	1/1:0,16:16:24.05:306,24,0	1/1:0,17:17:29.88:400,30,0	1/1:10,9:19:50.64:563,51,0	1/1:19,9:28:45.40:648,45,0	0/0:33,0:33:71.20:0,71,1481	0/1:12,0:10:9.90:52,0,10	0/0:12,0:12:4.94:0,5,19	1/1:18,0:17:10.65:90,11,0	1/1:0,15:15:21:272,21,0	0/1:13,1:13:15.12:15,0,27	1/1:25,0:25:11.49:89,11,0	0/0:14,0:14:31.52:0,32,662	0/0:30,0:30:90.26:0,90,1551	1/1:21,0:20:8.71:192,9,0	0/0:11,0:11:33.11:0,33,635
chr10	38168186	.	A	ACACACACAC	1538.80	PASS	AB=0.975;AC=15;AF=0.268;AN=56;BaseQRankSum=5.195;DP=612;FS=0.000;HRun=0;HaplotypeScore=196.6416;InbreedingCoeff=-0.1558;MQ=59.51;MQ0=8;MQRankSum=-1.904;QD=5.70;ReadPosRankSum=-5.255;VQSLOD=0.9672;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:25:11.66:253,0,12	0/0:9,0:9:27.08:0,27,744	0/0:49,0:28:59.59:0,60,1047	0/0:41,0:21:40.50:0,40,651	0/1:25,0:24:99:164,0,285	0/0:34,0:34:99:0,102,2125	0/0:27,0:27:78.22:0,78,1731	0/1:25,0:24:86.82:116,0,87	0/1:14,0:14:4.88:5,0,397	0/0:20,0:20:60.12:0,60,1489	0/0:21,0:21:60.19:0,60,1674	0/1:17,0:17:47.51:48,0,49	0/1:15,0:15:39.52:40,0,414	0/0:16,0:16:13.46:0,13,381	0/0:18,0:18:30.10:0,30,534	0/1:20,0:20:68.30:68,0,467	0/1:30,0:30:91.72:92,0,524	0/0:36,0:36:84.86:0,85,2415	0/1:10,1:9:28.10:165,0,28	1/1:10,2:12:8.70:249,9,0	0/1:18,0:17:15.92:131,0,16	0/0:15,0:15:8.22:0,8,320	0/1:12,0:13:7.10:215,0,7	0/1:24,0:24:8.18:8,0,22	0/0:15,0:15:42.14:0,42,1184	0/0:30,0:30:90.29:0,90,2584	0/1:18,1:18:61.06:144,0,61	0/0:11,0:11:33.11:0,33,1013
chr10	38168198	.	CAT	C	4106.36	PASS	AB=1.000;AC=22;AF=0.393;AN=56;BaseQRankSum=11.783;DP=634;FS=19.229;HRun=0;HaplotypeScore=115.7894;InbreedingCoeff=0.6890;MQ=58.41;MQ0=4;MQRankSum=1.016;QD=14.88;ReadPosRankSum=-0.748;VQSLOD=2.0867;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:26:29.30:0,29,265	0/0:10,0:10:30.05:0,30,476	0/0:36,0:22:31.80:0,32,612	0/0:29,0:14:23.01:0,23,293	1/1:24,0:23:59.86:604,60,0	0/0:32,0:32:93.21:0,93,1545	0/0:33,0:33:95.52:0,96,1304	0/1:29,0:28:37.12:37,0,621	1/1:12,2:14:21.87:377,22,0	0/0:21,0:21:41.19:0,41,977	0/0:23,0:23:69.13:0,69,1156	0/1:21,0:21:13.93:61,0,14	1/1:15,1:16:24.87:429,25,0	1/1:14,1:15:27.05:330,27,0	1/1:19,2:21:28.41:461,28,0	1/1:22,0:22:60.02:647,60,0	1/1:32,0:32:69.41:726,69,0	0/0:35,0:35:83.66:0,84,1712	0/1:14,0:12:0.11:0,0,176	0/0:14,0:14:15.01:0,15,157	0/0:23,0:22:4.57:0,5,164	1/1:17,1:18:29.99:348,30,0	0/0:13,0:12:7.45:0,7,39	1/1:26,0:26:5.80:47,6,0	0/0:20,0:20:43.32:0,43,813	0/0:29,0:29:87.12:0,87,1600	0/1:24,0:23:40.74:41,0,322	0/0:12,0:12:36.07:0,36,589
chr10	38168200	.	T	TAC	176.33	PASS	AB=0.954;AC=10;AF=0.179;AN=56;BaseQRankSum=4.007;DP=631;FS=0.000;HRun=0;HaplotypeScore=130.3830;InbreedingCoeff=0.2558;MQ=57.99;MQ0=4;MQRankSum=-1.451;QD=1.12;ReadPosRankSum=-2.907;VQSLOD=0.9342;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:22.72:0,23,297	0/0:9,0:9:24.08:0,24,302	0/0:32,0:21:38.48:0,38,471	0/0:28,0:12:24.05:0,24,300	0/1:25,0:24:5.47:5,0,54	0/0:29,0:29:81.26:0,81,1020	0/0:33,0:33:75.23:0,75,929	0/0:31,0:30:46.22:0,46,708	0/1:16,0:16:21.08:21,0,63	0/0:21,0:21:57.16:0,57,697	0/0:22,0:22:57.18:0,57,709	1/1:5,16:21:6.02:87,6,0	0/0:17,0:17:5.23:0,5,117	0/0:14,0:14:18.73:0,19,77	0/0:21,0:21:29.62:0,30,126	0/1:24,0:24:16.73:17,0,70	0/0:29,0:29:26.93:0,27,104	0/0:35,0:35:96.29:0,96,1195	0/1:14,0:12:4.01:4,0,195	0/0:14,0:14:4.78:0,5,92	0/0:22,0:21:23.80:0,24,295	0/1:18,0:18:5.87:6,0,48	0/1:8,5:12:1.86:124,0,2	1/1:12,15:27:2.71:44,3,0	0/0:19,0:20:50.98:0,51,606	0/0:29,0:29:87.27:0,87,1085	0/0:26,0:25:40.14:0,40,419	0/0:12,0:12:30.10:0,30,378
chr10	38169339	.	T	TG	3934.07	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-11.399;DP=557;FS=0.830;HRun=7;HaplotypeScore=59.4123;InbreedingCoeff=0.9974;MQ=93.34;MQ0=0;MQRankSum=-2.433;QD=29.14;ReadPosRankSum=0.030;VQSLOD=4.1097;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,105,1013	1/1:0,6:6:18.06:217,18,0	0/0:25,0:25:60.03:0,60,555	0/0:26,0:28:37.19:0,37,432	0/0:25,0:25:63.09:0,63,608	1/1:4,14:19:44.96:506,45,0	1/1:1,16:17:37.68:501,38,0	0/0:20,0:20:56.99:0,57,538	0/0:14,0:14:36.05:0,36,348	1/1:4,17:21:51.16:616,51,0	1/1:1,10:11:21.06:254,21,0	0/0:18,0:18:48.07:0,48,463	0/0:11,0:11:33.05:0,33,319	0/0:24,0:24:63.09:0,63,608	0/0:27,0:27:78.12:0,78,753	0/0:23,0:22:66.09:0,66,632	0/0:25,0:25:66.10:0,66,637	1/1:1,10:11:30.09:362,30,0	0/0:11,0:11:30.05:0,30,289	0/0:29,0:29:69.10:0,69,666	0/0:27,0:27:43.38:0,43,585	0/0:18,0:18:51.07:0,51,487	0/0:10,0:10:24.03:0,24,232	0/0:22,0:22:57.09:0,57,550	1/1:1,10:11:30.06:347,30,0	1/1:4,21:25:60.14:697,60,0	0/0:27,0:27:78.12:0,78,753	1/1:0,14:14:36.11:435,36,0
chr10	38171475	.	AT	A	3893.65	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=12.885;DP=671;FS=2.001;HRun=9;HaplotypeScore=73.9268;InbreedingCoeff=0.9998;MQ=77.28;MQ0=0;MQRankSum=-0.324;QD=22.77;ReadPosRankSum=-1.990;VQSLOD=3.7696;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:3,24:27:69.04:632,69,0	0/0:14,0:14:39.11:0,39,442	0/0:23,0:19:34.32:0,34,352	0/0:26,0:25:41.90:0,42,419	0/0:23,1:24:38.72:0,39,691	0/0:23,0:23:60.18:0,60,692	0/0:16,0:16:42.12:0,42,485	1/1:3,24:27:72.03:659,72,0	0/0:23,0:23:66.18:0,66,750	0/0:31,0:31:81.23:0,81,927	0/0:27,0:27:72.17:0,72,816	0/0:23,0:23:63.17:0,63,714	0/0:20,0:20:54.16:0,54,623	0/0:25,0:25:69.19:0,69,787	0/0:19,0:19:42.12:0,42,485	0/0:30,0:30:75.22:0,75,866	0/0:29,0:29:84.25:0,84,969	0/0:12,0:12:36.07:0,36,401	1/1:3,28:31:84.02:764,84,0	1/1:3,34:37:99:906,99,0	1/1:3,25:28:69.03:632,69,0	0/0:21,0:22:53.99:0,54,603	0/0:23,0:23:60.17:0,60,685	0/0:17,0:17:48.14:0,48,554	0/0:23,0:23:66.20:0,66,762	0/0:35,0:35:90.27:0,90,1038	1/1:8,13:21:32.99:302,33,0	0/0:15,0:15:45.13:0,45,519
chr10	38171691	.	C	CT	8344.17	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-16.904;DP=767;FS=18.425;HRun=1;HaplotypeScore=67.7446;InbreedingCoeff=1.0000;MQ=89.48;MQ0=0;MQRankSum=-6.884;QD=40.90;ReadPosRankSum=-0.085;VQSLOD=2.9169;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,42:44:99:1888,126,0	0/0:13,0:13:39.13:0,39,506	0/0:30,0:30:87.26:0,87,1075	0/0:26,0:26:78.19:0,78,967	0/0:18,0:18:51.13:0,51,620	0/0:23,0:23:63.15:0,63,772	0/0:26,0:26:78.25:0,78,999	1/1:3,25:28:75.19:1033,75,0	0/0:33,0:33:93.25:0,93,1152	0/0:26,0:26:72.22:0,72,907	0/0:16,0:16:45.14:0,45,570	0/0:30,0:30:87.27:0,87,1117	0/0:26,0:26:78.24:0,78,999	0/0:21,0:21:63.20:0,63,816	0/0:28,0:28:84.27:0,84,1091	0/0:35,0:35:99:0,99,1285	0/0:25,0:25:75.24:0,75,973	0/0:17,0:16:42.14:0,42,545	1/1:2,21:23:66.22:962,66,0	1/1:0,25:25:69.19:1009,69,0	1/1:2,58:60:99:2463,166,0	0/0:29,0:29:84.24:0,84,1051	0/0:36,0:36:99:0,105,1343	0/0:44,0:44:99:0,117,1486	0/0:21,0:21:63.20:0,63,814	0/0:24,0:24:69.21:0,69,879	1/1:0,24:24:66.22:989,66,0	0/0:16,0:16:48.16:0,48,623
chr10	38172289	.	GTGTTCGTCCTCT	G	14616.90	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=16.390;DP=647;FS=3.728;HRun=0;HaplotypeScore=272.8684;InbreedingCoeff=0.9991;MQ=85.70;MQ0=0;MQRankSum=-17.205;QD=90.23;ReadPosRankSum=5.310;VQSLOD=4.5128;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,129,7756	0/0:12,0:12:36.12:0,36,2245	0/0:28,0:28:81.25:0,81,3521	0/0:19,0:19:57.17:0,57,2749	1/1:3,14:18:33.11:1227,33,0	0/0:27,0:27:81.28:0,81,4961	0/0:28,0:28:84.27:0,84,4679	0/0:27,0:27:81.28:0,81,4453	1/1:5,15:20:45.15:1729,45,0	0/0:28,0:28:81.28:0,81,4946	0/0:21,0:21:63.22:0,63,3630	0/0:34,0:34:99:0,99,5649	1/1:4,15:19:42.14:1620,42,0	1/1:3,17:20:51.18:1959,51,0	1/1:3,23:26:60.21:2280,60,0	1/1:1,34:35:99:3815,99,0	1/1:4,11:15:27.09:961,27,0	0/0:32,0:31:93.29:0,93,5380	0/0:12,0:12:36.12:0,36,1983	0/0:20,0:20:57.20:0,57,3296	0/0:41,0:41:99:0,111,6139	1/1:0,9:9:27.09:1025,27,0	0/0:9,0:9:27.09:0,27,1549	0/0:22,0:22:66.21:0,66,3700	0/0:26,0:26:75.26:0,75,4432	0/0:19,0:19:57.20:0,57,3437	0/0:29,0:29:84.25:0,84,4440	0/0:8,0:8:24.08:0,24,1477
chr10	38173106	.	T	TAG	7976.59	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=2.539;DP=692;FS=2.841;HRun=0;HaplotypeScore=96.1699;InbreedingCoeff=0.9742;MQ=80.26;MQ0=0;MQRankSum=1.328;QD=39.88;ReadPosRankSum=-0.031;VQSLOD=6.2577;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,129,1640	0/0:6,0:6:15.05:0,15,192	0/0:30,0:30:56.35:0,56,740	0/0:27,0:26:11.45:0,11,336	0/0:23,0:23:51.16:0,51,653	0/0:24,0:24:60.15:0,60,751	0/0:25,0:25:63.20:0,63,810	1/1:5,23:29:72.19:1127,72,0	0/0:29,0:30:84.10:0,84,1054	0/0:11,0:11:33.11:0,33,425	0/0:13,0:13:36.12:0,36,462	1/1:3,27:30:78.27:1315,78,0	0/0:29,0:29:66.21:0,66,849	0/0:24,0:24:60.19:0,60,771	0/0:25,0:25:63.19:0,63,796	0/0:26,0:26:66.21:0,66,849	0/0:39,0:39:99:0,105,1333	0/0:30,0:30:81.26:0,81,1036	1/1:0,12:13:39.10:619,39,0	1/1:3,16:19:42.13:681,42,0	1/1:4,19:23:45.15:759,45,0	0/0:18,0:18:48.14:0,48,602	1/1:1,20:21:51.17:845,51,0	1/1:2,35:37:87.30:1468,87,0	0/0:26,0:26:72.20:0,72,891	0/0:34,0:34:90.28:0,90,1145	1/1:3,25:28:69.24:1162,69,0	0/0:2,0:2:6.02:0,6,77
chr10	38173651	.	C	CAT	810.63	PASS	AB=1.000;AC=10;AF=0.208;AN=48;BaseQRankSum=-2.410;DP=391;FS=0.000;HRun=0;HaplotypeScore=78.2166;InbreedingCoeff=0.4771;MQ=33.61;MQ0=172;MQRankSum=-0.620;QD=6.87;ReadPosRankSum=0.083;VQSLOD=2.8381;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	0/0:3,0:3:3.01:0,3,39	0/0:8,0:1:3.01:0,3,34	0/0:11,0:5:2.22:0,2,8	0/1:27,0:11:0:0,0,0	./.	./.	1/1:11,15:8:24.08:402,24,0	0/0:13,0:8:3.01:0,3,39	0/0:24,0:16:39.12:0,39,495	0/1:20,0:11:0:0,0,0	0/0:17,0:7:3.01:0,3,35	0/0:12,0:7:5.92:0,6,77	0/0:15,0:10:3.01:0,3,39	0/0:15,0:11:6.02:0,6,77	0/0:12,0:6:3.01:0,3,39	0/0:11,0:3:3.01:0,3,39	0/0:10,0:4:8.01:0,8,64	1/1:2,9:8:15.01:222,15,0	1/1:4,11:11:9.03:150,9,0	./.	0/0:10,0:5:9.03:0,9,111	0/0:13,0:6:6.02:0,6,72	0/0:10,0:3:6.01:0,6,74	0/0:18,0:11:2.89:0,3,38	0/0:24,0:18:42.09:0,42,514	1/1:10,9:11:11.97:169,12,0	0/0:6,0:1:3.01:0,3,39
chr10	38173685	.	TATAC	T	959.65	PASS	AB=0.900;AC=29;AF=0.659;AN=44;BaseQRankSum=4.749;DP=467;FS=6.705;HRun=0;HaplotypeScore=133.6071;InbreedingCoeff=0.3741;MQ=28.38;MQ0=151;MQRankSum=-0.259;QD=3.72;ReadPosRankSum=2.437;VQSLOD=1.7794;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:10,0:10:3.01:0,3,70	./.	./.	0/1:14,8:11:0.11:0,0,0	0/0:17,0:10:3.01:0,3,70	0/0:12,0:7:5.42:0,5,105	./.	1/1:7,4:6:3.01:47,3,0	0/0:22,0:14:33.03:0,33,653	./.	1/1:7,14:13:3.01:47,3,0	1/1:5,9:11:12.04:186,12,0	1/1:8,9:14:3.01:47,3,0	1/1:7,10:14:6.02:93,6,0	1/1:4,16:13:12.04:186,12,0	1/1:8,0:4:3.01:45,3,0	0/1:9,0:5:18.86:19,0,131	1/1:22,0:18:8.47:58,8,0	1/1:16,0:14:6.01:56,6,0	./.	1/1:3,12:13:9.03:140,9,0	1/1:3,7:8:3.01:47,3,0	1/1:2,6:5:5.91:93,6,0	0/0:24,0:16:5.96:0,6,139	0/1:27,1:19:10.48:10,0,680	1/1:18,0:16:3:28,3,0	0/0:13,0:4:6.02:0,6,141
chr10	38174381	.	C	CAA	10788.56	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-6.005;DP=584;FS=4.362;HRun=8;HaplotypeScore=77.0157;InbreedingCoeff=0.9885;MQ=73.79;MQ0=2;MQRankSum=-0.506;QD=28.32;ReadPosRankSum=0.834;VQSLOD=4.9260;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:9,26:38:65.02:895,65,0	0/0:6,0:6:12.01:0,12,134	0/0:30,0:24:14.54:0,15,317	0/0:19,0:16:13.32:0,13,108	1/1:3,12:15:39.13:613,39,0	0/0:19,0:19:48.12:0,48,535	0/0:16,0:16:45.12:0,45,501	1/1:4,19:25:63.15:902,63,0	1/1:4,28:32:69.23:1090,69,0	0/0:19,0:19:39.08:0,39,423	0/0:19,0:19:51.12:0,51,569	1/1:6,1:20:25.49:124,25,0	1/1:2,19:21:48.16:760,48,0	1/1:1,20:22:48.16:759,48,0	1/1:3,25:29:53.25:815,53,0	1/1:2,16:20:43.88:626,44,0	1/1:1,15:19:50.52:727,51,0	0/0:15,0:15:45.10:0,45,491	1/1:6,18:24:60.19:910,60,0	1/1:4,17:24:53.45:723,53,0	1/1:4,13:18:32.84:468,33,0	1/1:6,11:17:27.05:391,27,0	1/1:5,1:14:27.35:148,27,0	1/1:0,0:13:21.34:76,21,0	0/0:21,0:21:63.16:0,63,690	0/0:26,0:26:75.20:0,75,835	1/1:6,21:28:51.13:760,51,0	0/0:11,0:11:33.09:0,33,367
chr10	38174497	.	T	TC	1496.88	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-4.628;DP=693;FS=2.003;HRun=7;HaplotypeScore=77.8218;InbreedingCoeff=0.9650;MQ=77.04;MQ0=0;MQRankSum=-1.795;QD=28.24;ReadPosRankSum=0.772;VQSLOD=4.2527;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,46:53:99:1592,132,0	0/0:13,0:13:23.99:0,24,232	0/0:14,0:15:22.57:0,23,298	0/0:16,0:16:13.92:0,14,188	0/0:16,0:16:30.04:0,30,289	0/0:20,0:20:57.09:0,57,550	0/0:31,0:31:78.10:0,78,747	0/0:18,0:18:18.01:0,18,173	0/0:39,0:39:99:0,105,1008	0/0:24,0:24:60.07:0,60,579	0/0:16,0:16:33.05:0,33,318	0/0:24,0:24:66.10:0,66,637	0/0:22,0:22:63.10:0,63,608	0/0:25,0:25:59.75:0,60,572	0/0:31,0:31:78.12:0,78,753	0/0:26,0:26:69.11:0,69,665	0/0:34,0:34:96.14:0,96,921	0/0:26,0:26:60.08:0,60,579	0/0:22,0:22:45.04:0,45,427	0/0:16,0:16:39.06:0,39,376	0/0:53,0:53:99:0,138,1332	0/0:18,0:18:45.05:0,45,429	0/0:21,0:21:48.03:0,48,455	0/0:47,0:47:99:0,123,1181	0/0:19,0:19:42.07:0,42,405	0/0:20,0:20:48.04:0,48,452	0/0:18,0:18:48.05:0,48,455	0/0:10,0:10:24.04:0,24,232
chr10	38176220	.	TTTTG	T	4864.11	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-1.297;DP=566;FS=6.783;HRun=0;HaplotypeScore=115.1392;InbreedingCoeff=0.9439;MQ=64.20;MQ0=11;MQRankSum=-4.305;QD=16.27;ReadPosRankSum=-3.341;VQSLOD=3.3771;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:16,5:21:56.26:506,56,0	0/0:10,0:10:20.19:0,20,117	0/0:35,0:14:25.90:0,26,356	0/0:46,0:15:5.53:0,6,42	1/1:22,1:23:62.72:522,63,0	0/0:32,0:32:71.13:0,71,502	0/0:21,0:21:34.72:0,35,216	1/1:28,2:29:49.95:408,50,0	1/1:11,1:12:34.23:294,34,0	0/0:16,0:16:32.53:0,33,229	0/0:21,0:21:52.98:0,53,415	1/1:15,0:15:35.84:334,36,0	1/1:13,1:13:27.10:222,27,0	1/1:15,1:16:14.19:134,14,0	1/1:17,1:18:24.96:187,25,0	1/1:18,0:16:41.41:311,41,0	1/1:21,0:21:24.85:255,25,0	0/0:19,0:19:44.88:0,45,309	1/1:16,1:16:32.04:326,32,0	1/1:17,0:17:29.38:252,29,0	1/1:8,0:8:5.71:32,6,0	1/1:15,1:16:29.74:256,30,0	1/1:20,5:25:46.03:587,46,0	1/1:1,15:16:9.03:151,9,0	0/0:29,0:29:63.29:0,63,456	0/0:23,0:23:53.37:0,53,424	1/1:11,1:12:7.80:88,8,0	0/0:13,0:13:21.39:0,21,171
chr10	38176221	.	TTTG	T	6909.17	PASS	AB=1.000;AC=36;AF=0.643;AN=56;BaseQRankSum=-4.996;DP=563;FS=14.186;HRun=0;HaplotypeScore=98.8778;InbreedingCoeff=0.7360;MQ=64.22;MQ0=11;MQRankSum=-2.926;QD=18.77;ReadPosRankSum=-3.342;VQSLOD=2.7405;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:22:49.93:473,50,0	0/0:9,0:9:0.60:0,1,44	0/0:35,0:14:24.72:0,25,313	0/1:48,0:15:17.84:18,0,33	1/1:18,7:25:70.33:863,70,0	0/0:32,0:32:43.56:0,44,261	0/1:21,0:21:12.20:12,0,66	1/1:21,9:29:73.43:816,73,0	1/1:8,4:12:36.06:425,36,0	0/0:16,0:16:13.76:0,14,125	0/0:21,0:21:19.24:0,19,219	1/1:14,1:15:36.87:285,37,0	1/1:13,2:14:38.42:353,38,0	1/1:2,13:15:14.97:181,15,0	1/1:3,14:17:27.01:323,27,0	1/1:12,6:16:43.57:510,44,0	1/1:11,10:21:48.85:617,49,0	0/0:19,0:19:33.45:0,33,195	1/1:13,3:15:43.43:462,43,0	1/1:13,4:17:46.72:472,47,0	1/1:1,7:8:5.84:35,6,0	1/1:2,14:16:29.97:389,30,0	1/1:22,2:24:38.79:457,39,0	1/1:16,0:16:9.03:109,9,0	0/0:29,0:29:23.45:0,23,263	0/0:23,0:23:26.95:0,27,250	1/1:2,10:12:8.73:109,9,0	0/0:11,0:11:1.12:0,1,109
chr10	38176222	.	TTG	T	6487.82	PASS	AB=0.990;AC=43;AF=0.768;AN=56;BaseQRankSum=1.223;DP=561;FS=21.130;HRun=0;HaplotypeScore=91.9838;InbreedingCoeff=0.1110;MQ=64.24;MQ0=11;MQRankSum=-0.494;QD=12.67;ReadPosRankSum=3.284;VQSLOD=2.6189;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:23:58.16:479,58,0	0/1:9,0:9:5.50:8,0,5	0/0:35,0:14:23.88:0,24,245	0/1:48,0:16:9.94:10,0,24	1/1:24,1:25:70.24:663,70,0	0/1:31,0:31:27.77:28,0,107	0/1:21,0:21:15.23:33,0,15	1/1:28,2:29:75.47:675,75,0	1/1:12,0:12:36:336,36,0	0/0:14,0:14:15.15:0,15,98	0/1:20,0:20:67.92:68,0,86	1/1:15,0:15:37.12:278,37,0	1/1:14,2:15:43.11:363,43,0	1/1:14,1:15:15:166,15,0	1/1:15,2:17:26.98:281,27,0	1/1:17,1:16:44.84:405,45,0	1/1:19,2:21:53.90:580,54,0	0/1:17,1:18:37.54:38,0,71	1/1:15,1:15:43.90:426,44,0	1/1:14,3:17:50.91:459,51,0	1/1:8,0:8:5.89:37,6,0	1/1:16,0:16:29.93:283,30,0	1/1:24,0:24:35.69:433,36,0	1/1:16,0:16:9.02:91,9,0	0/1:28,1:29:83.65:84,0,148	0/1:23,0:23:78.04:78,0,135	1/1:12,0:12:8.89:111,9,0	0/1:11,0:11:75.59:76,0,84
chr10	38176223	.	TG	T	5392.01	PASS	AB=1.000;AC=36;AF=0.643;AN=56;BaseQRankSum=-2.373;DP=563;FS=22.810;HRun=1;HaplotypeScore=88.0306;InbreedingCoeff=0.7836;MQ=64.32;MQ0=11;MQRankSum=-2.240;QD=14.90;ReadPosRankSum=-3.616;VQSLOD=2.5685;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:23,1:24:55.44:470,55,0	0/0:9,0:9:20.85:0,21,95	0/0:34,0:14:17.39:0,17,209	0/1:48,0:15:7.12:7,0,26	1/1:25,0:25:70.63:596,71,0	0/0:32,0:32:64.75:0,65,318	0/0:21,0:21:34.07:0,34,173	1/1:29,0:28:77.03:586,77,0	1/1:12,0:12:35.86:302,36,0	0/0:15,0:15:31.50:0,32,194	0/0:20,0:20:16.16:0,16,202	1/1:15,1:16:28.63:255,29,0	1/1:15,1:15:42.81:368,43,0	1/1:15,0:15:14.98:133,15,0	1/1:17,0:17:26.78:217,27,0	1/1:16,2:16:44.75:369,45,0	1/1:20,1:21:53.92:476,54,0	0/0:19,0:19:21.17:0,21,169	1/1:16,1:16:35.34:357,35,0	1/1:18,0:18:50.76:416,51,0	1/1:7,1:8:5.91:38,6,0	1/1:15,0:15:29.84:244,30,0	1/1:23,0:24:12.96:359,13,0	1/1:16,0:16:8.97:74,9,0	0/0:29,0:29:30.63:0,31,308	0/0:20,2:22:1.97:0,2,212	1/1:12,0:12:9:84,9,0	0/1:11,0:11:41.70:42,0,117
chr10	38176224	.	GTT	G	3233.06	PASS	AB=1.000;AC=42;AF=0.750;AN=56;BaseQRankSum=-1.813;DP=559;FS=5.683;HRun=14;HaplotypeScore=102.1485;InbreedingCoeff=0.2747;MQ=64.36;MQ0=11;MQRankSum=0.769;QD=7.11;ReadPosRankSum=9.906;VQSLOD=0.3976;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:24:3.87:4,0,67	1/1:0,8:9:20.76:178,21,0	0/0:33,0:13:23.89:0,24,257	0/0:48,0:16:4.72:0,5,50	1/1:25,0:25:4.44:67,4,0	1/1:6,23:32:41.26:451,41,0	1/1:2,15:21:43.99:352,44,0	0/1:26,0:27:43.27:57,0,43	1/1:10,0:11:7.47:35,7,0	1/1:3,9:15:26.28:250,26,0	1/1:5,16:21:19.74:345,20,0	0/0:13,0:15:5.40:0,5,46	0/1:16,0:15:14.13:14,0,20	1/1:15,0:15:10.62:50,11,0	1/1:17,0:17:5.70:53,6,0	1/1:18,0:16:5.98:37,6,0	1/1:21,0:21:25.53:150,26,0	1/1:6,12:19:23.85:269,24,0	0/1:15,0:16:24.11:43,0,24	0/1:19,0:19:29.55:33,0,30	0/0:8,0:8:1.25:0,1,3	1/1:15,0:15:14.88:57,15,0	0/1:18,0:24:17.71:18,0,70	1/1:16,0:16:7.17:28,7,0	1/1:9,16:28:44.36:425,44,0	1/1:7,12:21:23.61:313,24,0	1/1:12,0:12:7.83:39,8,0	1/1:8,3:11:16.91:128,17,0
chr10	38177249	.	GACACACACACACACACACACAC	G	839.69	PASS	AC=6;AF=0.115;AN=52;BaseQRankSum=4.382;DP=583;FS=8.685;HRun=0;HaplotypeScore=280.2510;InbreedingCoeff=0.8388;MQ=54.61;MQ0=19;MQRankSum=-3.700;QD=11.83;ReadPosRankSum=1.644;VQSLOD=0.9814;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:27:18.06:0,18,937	0/0:6,0:11:18.03:0,18,604	./.	./.	0/0:14,0:16:21.07:0,21,1360	0/0:22,0:22:30.05:0,30,1604	0/0:24,0:24:33.36:0,33,1334	0/0:30,0:30:27.08:0,27,1032	0/0:22,0:22:30.10:0,30,2539	0/0:20,0:20:22.86:0,23,632	0/0:12,0:12:18.06:0,18,922	1/1:9,20:29:7.43:519,7,0	0/0:27,0:28:49.88:0,50,3323	0/0:23,0:23:30.10:0,30,2417	0/0:14,0:15:27.56:0,28,2034	0/0:13,0:13:27.07:0,27,1926	0/0:38,0:38:93.32:0,93,6141	0/0:12,0:11:24.08:0,24,1088	0/0:9,0:9:11.39:0,11,380	0/0:12,0:14:24.08:0,24,1499	0/0:42,0:37:56.22:0,56,3172	0/0:24,0:24:48.16:0,48,3416	1/1:10,2:11:3.01:83,3,0	1/1:17,12:30:11.24:355,11,0	0/0:16,0:19:24.08:0,24,1354	0/0:17,0:17:39.13:0,39,1918	0/0:13,0:14:24.08:0,24,1421	0/0:6,0:9:9.03:0,9,454
chr10	38179116	.	A	ACATTCAGG	44168.47	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-11.377;DP=818;FS=14.117;HRun=0;HaplotypeScore=181.2997;InbreedingCoeff=0.9997;MQ=78.51;MQ0=0;MQRankSum=-19.883;QD=83.81;ReadPosRankSum=0.137;VQSLOD=4.5228;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,18:37:72.12:2638,72,0	0/0:16,0:16:45.13:0,45,1154	0/0:34,0:33:88.15:0,88,2002	0/0:26,0:26:63.22:0,63,1665	1/1:6,19:30:63.17:2303,63,0	0/0:36,0:36:99:0,102,2864	0/0:28,0:28:81.26:0,81,2215	1/1:20,13:50:99:4845,138,0	1/1:6,21:29:78.22:3258,78,0	0/0:24,0:24:69.24:0,69,1896	0/0:25,0:25:72.23:0,72,1889	1/1:5,25:34:84.29:3600,84,0	1/1:4,22:29:72.21:2843,72,0	1/1:7,26:36:90.27:3773,90,0	1/1:6,27:39:96.33:4153,96,0	1/1:1,24:29:69.24:3051,69,0	1/1:8,12:38:30.06:1078,30,0	0/0:27,0:27:78.25:0,78,2139	1/1:8,8:24:66.12:2250,66,0	1/1:4,14:28:62.46:2082,62,0	1/1:6,8:22:32.98:1106,33,0	1/1:6,13:27:42.14:1747,42,0	1/1:4,14:23:50.91:1728,51,0	1/1:4,14:23:27.09:1176,27,0	0/0:28,0:28:78.22:0,78,2059	0/0:28,0:28:78.26:0,78,2117	1/1:4,19:29:57.20:2537,57,0	0/0:19,0:19:57.17:0,57,1490
chr10	38180645	.	G	GA	5406.08	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-14.504;DP=639;FS=3.012;HRun=7;HaplotypeScore=65.9726;InbreedingCoeff=0.9898;MQ=89.17;MQ0=1;MQRankSum=-2.696;QD=30.20;ReadPosRankSum=2.289;VQSLOD=5.4561;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:57.08:0,57,550	1/1:0,8:8:21.06:254,21,0	0/0:29,0:29:52.17:0,52,464	0/0:20,1:20:33.50:0,33,310	0/0:39,0:39:93.11:0,93,891	1/1:2,29:31:78.24:942,78,0	1/1:3,14:17:42.13:507,42,0	0/0:33,0:33:90.13:0,90,865	0/0:20,0:20:54.06:0,54,514	1/1:8,21:29:63.17:747,63,0	1/1:4,19:23:60.16:711,60,0	0/0:26,0:26:69.09:0,69,661	0/0:25,0:25:66.10:0,66,637	0/0:16,0:16:45.06:0,45,429	0/0:14,0:14:42.07:0,42,406	0/0:25,0:25:69.11:0,69,666	0/0:25,0:25:72.07:0,72,682	1/1:4,11:15:33.10:399,33,0	0/0:32,0:31:87.11:0,87,829	0/0:29,0:29:78.11:0,78,748	0/0:10,0:10:24.03:0,24,231	0/0:21,0:21:54.09:0,54,522	0/0:21,0:21:57.09:0,57,550	0/0:15,0:15:45.07:0,45,435	1/1:0,25:25:75.23:906,75,0	1/1:5,23:28:69.21:830,69,0	0/0:35,0:35:96.13:0,96,921	1/1:0,3:3:9.03:109,9,0
chr10	38181865	.	AT	A	5881.82	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-10.891;DP=631;FS=7.907;HRun=9;HaplotypeScore=80.3318;InbreedingCoeff=0.9848;MQ=75.36;MQ0=7;MQRankSum=-0.690;QD=21.39;ReadPosRankSum=-0.240;VQSLOD=5.2640;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,120,1511	0/0:2,0:8:14.33:0,14,77	0/0:49,2:23:32.22:0,32,309	0/0:34,0:12:11.38:0,11,75	1/1:5,24:29:71.79:620,72,0	0/0:3,0:21:42.76:0,43,223	0/0:0,0:14:28.41:0,28,143	1/1:3,23:26:68.91:592,69,0	1/1:1,8:9:21.01:192,21,0	0/0:4,0:25:60.29:0,60,332	0/0:1,0:23:59.82:0,60,315	0/0:17,0:17:12:0,12,89	1/1:3,13:16:33.01:301,33,0	1/1:3,17:20:50.92:454,51,0	1/1:2,12:14:27.01:246,27,0	1/1:1,15:16:36.02:329,36,0	1/1:4,29:33:75.04:685,75,0	0/0:2,0:28:56.71:0,57,286	1/1:1,22:23:65.98:585,66,0	1/1:4,25:29:68.99:622,69,0	1/1:2,6:8:15.01:137,15,0	1/1:4,16:20:48.02:438,48,0	0/0:21,0:21:27.01:0,27,136	0/0:14,0:14:23.95:0,24,83	0/0:2,0:18:36.93:0,37,186	0/0:4,0:20:45.62:0,46,236	1/1:4,28:32:75.01:682,75,0	0/0:2,0:16:39.77:0,40,200
chr10	38182292	.	TA	T	5060.91	PASS	AB=0.595;AC=30;AF=0.536;AN=56;BaseQRankSum=7.717;DP=595;FS=1.187;HRun=12;HaplotypeScore=73.5544;InbreedingCoeff=0.7924;MQ=75.38;MQ0=0;MQRankSum=1.865;QD=15.06;ReadPosRankSum=4.597;VQSLOD=5.6759;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:31:45.72:0,46,586	0/0:9,0:9:27.03:0,27,265	0/0:29,0:20:41.28:0,41,328	0/0:23,0:15:9.99:0,10,72	1/1:3,25:28:68.68:530,69,0	0/0:26,0:26:66.11:0,66,662	0/0:17,1:18:21.85:0,22,403	1/1:6,14:20:24.07:264,24,0	1/1:4,19:26:35.44:428,35,0	0/0:27,0:27:48.04:0,48,466	0/0:19,1:21:1.91:0,2,313	1/1:2,14:17:24.01:248,24,0	0/1:4,10:14:24.06:136,0,24	1/1:2,14:16:41.84:325,42,0	1/1:5,20:26:43.85:330,44,0	1/1:9,14:24:16.42:300,16,0	1/1:0,25:27:63.80:471,64,0	0/0:23,2:26:33.07:0,33,520	1/1:5,12:16:32.72:241,33,0	0/1:7,13:20:16.06:257,0,16	1/1:5,10:17:30.67:220,31,0	1/1:4,10:14:4.64:143,5,0	1/1:3,16:19:38.35:301,38,0	1/1:2,21:24:34.33:379,34,0	0/0:22,0:22:39.06:0,39,384	0/0:19,0:19:33.06:0,33,329	1/1:5,22:27:62.74:487,63,0	0/0:8,0:8:8.12:0,8,129
chr10	38183555	.	C	CCTTCCTCCCCA	13843.32	PASS	AB=0.771;AC=16;AF=0.286;AN=56;BaseQRankSum=-5.458;DP=686;FS=6.212;HRun=0;HaplotypeScore=199.3049;InbreedingCoeff=0.8232;MQ=62.82;MQ0=21;MQRankSum=-13.498;QD=77.34;ReadPosRankSum=-0.284;VQSLOD=4.0144;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:59,0:59:99:0,142,4497	1/1:9,4:16:33.09:1587,33,0	0/0:29,0:12:27.07:0,27,729	0/0:38,0:21:30.09:0,30,802	0/0:20,0:20:36.59:0,37,1147	1/1:14,6:21:36.12:1899,36,0	1/1:19,6:24:21.07:1027,21,0	0/0:25,0:24:42.12:0,42,1246	0/0:28,0:28:66.21:0,66,2131	1/1:19,13:32:69.24:3343,69,0	1/1:7,8:15:23.87:1318,24,0	0/0:22,0:21:53.72:0,54,1811	0/0:22,0:22:36.09:0,36,991	0/0:17,0:17:44.70:0,45,1419	0/0:33,0:33:75.26:0,75,2379	0/0:22,0:21:51.18:0,51,1709	0/0:41,0:41:99:0,99,3043	1/1:8,11:20:33.11:1820,33,0	0/0:20,0:14:36.11:0,36,1066	0/0:17,0:15:36.10:0,36,1050	0/0:40,0:38:90.26:0,90,2801	0/0:16,0:16:30.09:0,30,912	0/0:21,0:21:54.17:0,54,1644	0/0:16,0:16:36.12:0,36,1122	1/1:12,3:17:27.09:1262,27,0	0/1:15,7:20:99:1432,0,263	0/0:21,0:18:48.12:0,48,1383	0/1:3,1:4:99:154,0,244
chr10	38185285	.	CT	C	13060.77	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=20.151;DP=723;FS=22.358;HRun=1;HaplotypeScore=123.2893;InbreedingCoeff=0.9988;MQ=83.18;MQ0=1;MQRankSum=-2.594;QD=36.38;ReadPosRankSum=5.358;VQSLOD=2.9042;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:84.23:0,84,1209	0/0:14,0:14:42.13:0,42,606	0/0:28,0:28:83.61:0,84,1153	0/0:16,0:15:41.60:0,42,525	1/1:1,22:23:60.05:787,60,0	0/0:22,0:22:51.06:0,51,673	0/0:34,0:34:99:0,102,1406	1/1:0,26:26:78.17:969,78,0	1/1:0,18:18:45.15:622,45,0	0/0:19,0:19:51.16:0,51,729	0/0:18,0:18:48.11:0,48,630	0/0:39,0:39:99:0,111,1600	1/1:0,28:28:72.19:1002,72,0	1/1:0,34:34:87.29:1208,87,0	1/1:0,31:31:78.26:1087,78,0	1/1:0,29:29:84.28:1171,84,0	1/1:0,31:31:90.30:1254,90,0	0/0:29,0:29:84.21:0,84,1209	1/1:0,23:23:69.19:903,69,0	1/1:0,30:30:84.11:1137,84,0	1/1:0,51:51:99:1754,126,0	1/1:0,6:6:18.06:250,18,0	0/0:13,0:13:30.07:0,30,406	0/0:39,0:39:99:0,101,1499	0/0:25,0:25:57.15:0,57,790	0/0:24,0:24:63.09:0,63,804	1/1:0,29:29:66.22:918,66,0	0/0:11,0:11:32.93:0,33,379
chr10	38186219	.	TCATACACACCATA	T	15310.57	PASS	AB=0.868;AC=40;AF=0.769;AN=52;BaseQRankSum=9.590;DP=828;FS=36.140;HRun=0;HaplotypeScore=286.7372;InbreedingCoeff=0.5922;MQ=45.14;MQ0=55;MQRankSum=-11.066;QD=25.52;ReadPosRankSum=1.810;VQSLOD=2.6780;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:45:93.21:0,93,5363	1/1:5,4:9:9:164,9,0	0/1:46,0:6:4.05:4,0,38	./.	0/1:17,9:24:0:0,0,0	1/1:5,8:11:12.04:419,12,0	1/1:15,5:17:17.93:599,18,0	1/1:27,14:37:42.14:1072,42,0	1/1:11,16:27:30.10:1022,30,0	1/1:24,9:31:39.12:1318,39,0	1/1:11,4:14:2.11:100,2,0	0/0:44,0:44:72.24:0,72,3782	1/1:11,19:28:51.18:1733,51,0	1/1:9,9:18:18.06:665,18,0	1/1:10,33:42:51.18:1700,51,0	1/1:25,15:36:48.15:1664,48,0	0/1:10,3:11:99:421,0,117	0/1:10,1:11:70.68:71,0,229	1/1:15,3:12:12.04:446,12,0	1/1:20,21:41:12:326,12,0	1/1:41,4:37:5.78:134,6,0	1/1:15,11:24:11.89:312,12,0	0/0:28,0:28:45.12:0,45,2614	0/0:57,0:56:99:0,99,4916	1/1:15,16:31:38.95:1061,39,0	1/1:23,6:27:30.08:887,30,0	1/1:13,12:25:33.11:1194,33,0	./.
chr10	38186241	.	C	CA	1422.41	PASS	AB=0.971;AC=21;AF=0.404;AN=52;BaseQRankSum=3.404;DP=719;FS=5.295;HRun=1;HaplotypeScore=239.8943;InbreedingCoeff=-0.4851;MQ=40.58;MQ0=94;MQRankSum=-6.008;QD=3.15;ReadPosRankSum=-1.015;VQSLOD=-0.6641;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:53:99:0,111,1531	0/1:8,0:8:11.97:57,0,12	1/1:46,0:1:2.74:12,3,0	./.	0/1:14,0:13:0.13:0,0,0	0/1:15,0:11:18.28:82,0,18	0/1:11,2:11:2.35:178,0,2	0/0:27,0:22:3.55:0,4,618	0/1:23,0:23:96.25:96,0,272	0/1:14,1:13:42.88:144,0,43	0/0:6,0:4:2.97:0,3,20	0/0:46,0:45:87.18:0,87,1135	0/1:25,2:25:99:304,0,121	0/1:21,0:21:13.32:13,0,247	0/1:44,0:43:99:183,0,422	0/1:35,4:37:99:142,0,354	0/1:16,1:14:89.81:90,0,257	0/1:7,0:7:17.90:18,0,165	0/1:13,1:8:25.15:25,0,155	0/1:28,0:27:15.35:15,0,154	0/1:40,1:34:20.36:20,0,286	0/1:23,1:22:16.29:16,0,188	0/0:30,0:30:60.30:0,60,838	0/0:52,0:51:99:0,114,1544	0/1:18,0:18:75.28:75,0,126	0/1:15,0:14:76.17:76,0,171	0/1:22,0:22:20.41:20,0,176	./.
chr10	38186279	.	C	CT	1893.64	PASS	AC=16;AF=0.296;AN=54;BaseQRankSum=8.045;DP=823;FS=3.307;HRun=0;HaplotypeScore=258.5963;InbreedingCoeff=0.9576;MQ=48.40;MQ0=5;MQRankSum=-8.540;QD=28.69;ReadPosRankSum=-2.862;VQSLOD=1.8807;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:62,0:62:99:0,175,2336	1/1:0,6:6:15.05:218,15,0	0/0:49,0:21:63.20:0,63,858	0/0:44,0:24:63.65:0,64,829	0/0:17,0:17:45.08:0,45,557	1/1:1,13:11:21.07:309,21,0	1/1:1,3:4:9.03:142,9,0	0/0:41,1:42:66.46:0,66,1484	0/0:34,0:34:81.27:0,81,1104	1/1:2,4:6:12.04:192,12,0	1/1:0,4:4:6.02:83,6,0	0/0:42,0:41:99:0,108,1436	0/0:40,0:39:99:0,105,1447	0/0:33,0:33:84.92:0,85,1132	0/0:59,0:58:99:0,153,2009	0/0:51,0:50:99:0,138,1859	0/0:21,1:20:51.11:0,51,665	1/1:1,5:5:12.04:191,12,0	0/0:24,0:23:63.20:0,63,856	0/0:27,0:26:72.19:0,72,918	0/0:57,4:57:28.46:0,28,1381	0/0:32,0:31:86.75:0,87,1132	0/0:33,0:33:87.27:0,87,1185	0/0:56,0:56:99:0,159,2199	1/1:3,11:14:33.10:427,33,0	1/1:1,11:12:33.11:527,33,0	0/0:29,0:29:81.27:0,81,1100	./.
chr10	38186299	.	T	TCA	20048.63	PASS	AC=48;AF=0.889;AN=54;BaseQRankSum=-6.539;DP=940;FS=0.544;HRun=0;HaplotypeScore=179.3522;InbreedingCoeff=0.8653;MQ=42.95;MQ0=74;MQRankSum=4.574;QD=25.28;ReadPosRankSum=1.795;VQSLOD=5.6936;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:61,0:54:99:0,105,1304	1/1:5,4:7:9.03:148,9,0	0/0:43,0:17:15.58:0,16,144	0/0:37,0:14:22.51:0,23,263	1/1:12,12:21:39:609,39,0	1/1:7,9:11:12.01:197,12,0	1/1:6,6:9:14.85:244,15,0	1/1:28,14:39:46.69:1175,47,0	1/1:14,26:39:66.23:1089,66,0	1/1:11,8:14:30.06:428,30,0	1/1:9,11:18:3.01:50,3,0	1/1:9,25:33:51.12:811,51,0	1/1:8,36:39:90.31:1484,90,0	1/1:10,31:37:37.75:1137,38,0	1/1:25,43:62:99:1680,102,0	1/1:12,49:57:99:1737,108,0	1/1:7,21:23:48.14:791,48,0	1/1:3,3:3:8.99:119,9,0	1/1:11,13:18:36.07:528,36,0	1/1:10,14:23:45.15:743,45,0	1/1:23,59:73:99:1683,102,0	1/1:11,33:42:40.74:1200,41,0	1/1:4,26:30:57.19:941,57,0	1/1:22,37:53:67.84:1634,68,0	1/1:11,5:13:9.03:148,9,0	1/1:6,11:16:33.11:541,33,0	1/1:5,25:31:56.90:932,57,0	./.
chr10	38186346	.	TCA	T	1508.97	PASS	AB=0.631;AC=10;AF=0.192;AN=52;BaseQRankSum=1.299;DP=1198;FS=1.236;HRun=0;HaplotypeScore=153.9211;InbreedingCoeff=0.1349;MQ=30.96;MQ0=345;MQRankSum=-6.700;QD=5.92;ReadPosRankSum=-0.273;VQSLOD=3.4275;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:73,0:55:65.03:0,65,989	1/1:6,9:8:6.02:82,6,0	./.	./.	0/0:37,0:29:33.09:0,33,531	0/1:8,21:10:21.73:124,0,22	0/1:11,17:13:57.82:124,0,58	0/0:51,0:22:54.11:0,54,845	0/0:45,0:30:36.09:0,36,514	0/1:22,49:29:99:786,0,141	1/1:3,24:22:2.90:41,3,0	0/0:20,0:17:18.06:0,18,296	0/0:70,0:41:54.15:0,54,840	0/0:48,0:29:42.14:0,42,704	0/0:61,0:44:47.17:0,47,947	0/0:79,0:54:72.23:0,72,1176	0/0:31,0:17:24.08:0,24,369	0/1:14,8:8:99:103,0,126	0/0:22,0:11:33.11:0,33,565	0/0:31,0:23:18.06:0,18,303	0/0:99,0:73:59.73:0,60,975	0/0:47,0:38:39.13:0,39,647	0/0:28,0:21:27.09:0,27,447	0/0:43,0:31:57.19:0,57,954	0/1:9,19:15:27.64:111,0,28	0/1:16,18:13:99:278,0,160	0/0:43,0:39:39.13:0,39,644	0/0:11,5:1:3.01:0,3,43
chr10	38186363	.	TCATACACACCATA	T	1619.47	PASS	AB=0.920;AC=11;AF=0.220;AN=50;BaseQRankSum=5.040;DP=1217;FS=10.718;HRun=0;HaplotypeScore=196.5853;InbreedingCoeff=-0.1217;MQ=28.04;MQ0=365;MQRankSum=-3.695;QD=4.10;ReadPosRankSum=3.847;VQSLOD=1.9543;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:76,0:55:24.08:0,24,572	0/1:13,2:9:8.96:155,0,9	./.	./.	0/0:41,0:32:15.05:0,15,614	0/1:28,2:11:66.73:104,0,67	0/1:24,4:8:10:294,0,10	0/0:49,0:19:21.07:0,21,1236	0/0:40,0:24:8.91:0,9,347	0/1:83,3:33:99:254,0,3859	0/0:29,1:23:6.02:0,6,273	0/0:18,0:15:11.97:0,12,491	0/0:64,0:30:15.05:0,15,509	./.	0/0:62,0:43:33.03:0,33,893	0/1:80,1:54:85.50:85,0,786	0/1:31,2:19:94.54:95,0,650	0/1:29,1:16:69.66:70,0,1311	0/0:30,0:11:24.07:0,24,1204	0/0:37,0:26:12.04:0,12,559	0/0:97,1:64:13.56:0,14,469	0/0:39,1:31:12.04:0,12,415	0/0:23,0:14:3.01:0,3,62	0/0:33,0:21:9.01:0,9,142	0/1:28,10:25:99:395,0,659	0/1:35,3:13:99:195,0,974	0/0:45,0:41:23.82:0,24,1050	1/1:15,1:1:3.01:113,3,0
chr10	38186444	.	T	TCA	13931.86	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=-1.709;DP=1172;FS=3.147;HRun=0;HaplotypeScore=165.2919;InbreedingCoeff=0.8566;MQ=45.82;MQ0=117;MQRankSum=2.875;QD=27.92;ReadPosRankSum=4.394;VQSLOD=6.0607;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:48:72.23:0,72,900	1/1:4,26:30:48.06:781,48,0	0/0:36,0:4:7.57:0,8,79	0/1:46,0:5:3.39:3,0,66	0/0:33,0:31:69.22:0,69,862	1/1:4,37:37:63.10:1039,63,0	1/1:17,43:47:70.48:1132,70,0	0/0:57,0:42:99:0,120,1487	0/0:38,0:37:78.23:0,78,960	1/1:30,54:78:99:3229,202,0	1/1:6,43:46:84.29:1387,84,0	1/1:1,3:3:3.01:49,3,0	0/0:44,0:36:78.20:0,78,957	0/0:36,0:32:66.19:0,66,810	0/0:65,0:62:93.26:0,93,1144	0/0:57,0:55:99:0,126,1574	0/0:28,1:27:9.06:0,9,501	1/1:17,19:31:42.80:1147,43,0	0/0:19,0:13:33.10:0,33,412	0/0:45,0:41:98.90:0,99,1226	0/0:82,0:66:99:0,126,1516	0/0:35,0:32:72.23:0,72,899	1/1:3,0:2:3.01:31,3,0	0/0:7,1:5:1.55:0,2,4	1/1:14,34:46:61.88:1533,62,0	1/1:11,52:61:99:2415,119,0	0/0:33,0:33:72.21:0,72,885	1/1:8,25:28:72.25:1186,72,0
chr10	38186491	.	TCA	T	288.39	PASS	AB=0.903;AC=7;AF=0.135;AN=52;BaseQRankSum=6.284;DP=1113;FS=0.916;HRun=0;HaplotypeScore=116.7324;InbreedingCoeff=0.0216;MQ=33.93;MQ0=291;MQRankSum=-2.061;QD=1.49;ReadPosRankSum=-3.773;VQSLOD=1.1562;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:35:42.07:0,42,638	0/1:29,1:24:65.29:65,0,142	./.	./.	0/0:40,0:27:33.11:0,33,577	0/0:40,4:25:30.10:0,30,495	0/0:39,5:20:15.01:0,15,196	0/0:53,0:27:81.22:0,81,1276	0/0:48,0:32:48.16:0,48,800	0/1:46,9:40:99:156,0,1021	0/0:39,0:28:24.07:0,24,381	0/0:11,0:9:3.01:0,3,35	0/0:54,0:30:39.09:0,39,635	0/0:40,0:26:36.10:0,36,582	0/0:56,0:45:48.16:0,48,804	0/0:63,0:47:84.27:0,84,1412	0/0:28,0:17:23.72:0,24,412	0/0:25,2:18:39.13:0,39,645	0/0:21,0:13:36.12:0,36,635	0/0:44,0:37:48.16:0,48,825	0/0:91,0:59:54.18:0,54,880	0/0:38,0:30:36.11:0,36,590	1/1:8,0:4:1.25:3,1,0	0/0:14,0:7:2.07:0,2,7	0/1:31,4:21:81.29:81,0,474	0/1:39,3:32:28.59:29,0,829	0/0:38,0:32:45.14:0,45,779	0/1:20,4:20:70.87:71,0,660
chr10	38187596	.	CTGCGTGTGTGTG	C	2974.59	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=6.464;DP=480;FS=17.842;HRun=0;HaplotypeScore=160.0235;InbreedingCoeff=0.9344;MQ=63.41;MQ0=4;MQRankSum=-1.366;QD=24.18;ReadPosRankSum=0.372;VQSLOD=1.5662;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:62.92:0,63,1386	1/1:0,7:7:6.02:226,6,0	0/0:37,0:25:53.90:0,54,562	0/0:34,0:19:40.75:0,41,429	0/0:11,0:12:20.77:0,21,262	1/1:11,2:14:32.94:511,33,0	1/1:2,25:27:12.04:452,12,0	0/0:25,0:25:72.16:0,72,698	0/0:15,0:15:35.85:0,36,464	1/1:11,0:11:32.26:290,32,0	1/1:10,0:11:26.87:210,27,0	0/0:15,0:15:38.86:0,39,814	0/0:14,0:14:25.92:0,26,391	0/0:7,0:7:17.24:0,17,286	0/0:15,0:15:38.68:0,39,799	0/0:15,0:14:32.92:0,33,530	0/0:33,0:33:77.22:0,77,1417	1/1:1,15:16:5.08:225,5,0	0/0:15,0:15:42.89:0,43,411	0/0:13,0:13:32.89:0,33,599	0/0:23,0:22:59.72:0,60,740	0/0:10,0:10:23.92:0,24,400	0/0:9,0:9:13.43:0,13,306	0/0:23,0:23:56.77:0,57,1410	1/1:11,4:15:21.02:369,21,0	1/1:0,11:12:32.99:688,33,0	0/0:16,0:16:42.09:0,42,577	1/1:0,1:10:6.02:207,6,0
chr10	38187599	.	CGTGT	C	2157.88	PASS	AB=0.735;AC=38;AF=0.792;AN=48;BaseQRankSum=2.172;DP=501;FS=2.087;HRun=0;HaplotypeScore=101.4664;InbreedingCoeff=0.0108;MQ=60.76;MQ0=9;MQRankSum=-3.544;QD=6.11;ReadPosRankSum=-0.150;VQSLOD=1.5796;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:21.02:0,21,309	1/1:7,0:7:6.01:56,6,0	./.	./.	1/1:9,1:10:3.01:43,3,0	1/1:13,0:13:9.01:84,9,0	1/1:25,0:25:12.01:111,12,0	0/0:27,0:26:0:0,0,0	0/1:11,10:21:6.97:84,0,7	./.	./.	0/1:9,1:15:32.49:32,0,35	1/1:6,8:15:12.03:167,12,0	1/1:6,5:11:3.01:46,3,0	1/1:8,9:17:18.06:279,18,0	1/1:8,8:14:12:186,12,0	1/1:18,15:35:30.05:446,30,0	1/1:18,0:17:6.01:56,6,0	0/1:13,3:17:12.21:41,0,12	0/1:10,3:13:10.21:84,0,10	1/1:24,0:23:3.01:46,3,0	1/1:7,7:13:6.02:93,6,0	0/1:3,4:7:16.98:41,0,17	0/1:15,0:22:22.22:22,0,63	1/1:13,0:13:6.01:56,6,0	1/1:13,0:13:15.02:139,15,0	1/1:12,4:17:9.02:121,9,0	1/1:10,0:10:6.01:56,6,0
chr10	38187989	.	AT	A	7435.97	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=17.853;DP=621;FS=3.198;HRun=1;HaplotypeScore=95.5971;InbreedingCoeff=0.9999;MQ=94.79;MQ0=0;MQRankSum=-7.948;QD=40.63;ReadPosRankSum=2.398;VQSLOD=5.2042;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,135,2058	1/1:0,10:10:30.10:419,30,0	0/0:31,0:31:87.22:0,87,1305	0/0:26,0:26:72.16:0,72,1078	0/0:34,0:34:99:0,102,1604	1/1:0,18:18:54.18:755,54,0	1/1:0,29:29:84.26:1154,84,0	0/0:26,0:26:78.27:0,78,1246	0/0:14,0:14:42.14:0,42,668	1/1:1,23:24:72.20:960,72,0	1/1:0,21:21:60.20:837,60,0	0/0:23,0:23:69.20:0,69,1056	0/0:18,0:18:54.15:0,54,816	0/0:22,0:22:66.21:0,66,1018	0/0:20,0:20:60.20:0,60,957	0/0:14,0:14:42.14:0,42,671	0/0:20,0:20:57.17:0,57,886	1/1:0,22:22:63.21:881,63,0	0/0:24,0:24:72.23:0,72,1108	0/0:23,0:23:66.21:0,66,1032	0/0:25,0:25:75.26:0,75,1199	0/0:15,0:15:45.15:0,45,719	0/0:19,0:19:57.19:0,57,910	0/0:22,0:22:66.23:0,66,1055	1/1:0,20:20:60.20:838,60,0	1/1:0,24:24:72.16:964,72,0	0/0:16,0:16:48.15:0,48,744	1/1:0,15:15:45.15:629,45,0
chr10	38188255	.	TA	T	6156.71	PASS	AB=0.908;AC=45;AF=0.804;AN=56;BaseQRankSum=3.572;DP=536;FS=0.522;HRun=10;HaplotypeScore=88.4065;InbreedingCoeff=0.4230;MQ=73.92;MQ0=0;MQRankSum=-5.137;QD=13.13;ReadPosRankSum=4.257;VQSLOD=4.9322;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:63.10:0,63,673	1/1:2,8:10:17.99:156,18,0	0/0:24,1:21:9.34:0,9,312	0/0:16,0:15:29.57:0,30,307	0/1:25,0:25:1.16:204,0,1	1/1:2,25:27:68.98:599,69,0	0/1:2,12:14:16.75:247,0,17	1/1:32,0:32:86.72:422,87,0	1/1:25,0:25:51.75:266,52,0	1/1:1,29:30:84.11:739,84,0	1/1:4,15:19:8.80:305,9,0	1/1:10,0:10:13.68:33,14,0	1/1:12,0:12:14.27:71,14,0	1/1:15,0:15:28.47:140,28,0	1/1:21,0:21:9.94:158,10,0	1/1:19,0:19:45.55:222,46,0	1/1:28,0:27:14.85:133,15,0	1/1:1,16:17:44.98:391,45,0	1/1:25,0:25:51.29:264,51,0	0/1:19,0:19:8.38:91,0,8	0/1:9,0:9:20.27:43,0,20	1/1:7,0:7:14.58:72,15,0	1/1:19,0:19:19.77:47,20,0	1/1:5,1:6:7.66:37,8,0	1/1:3,19:22:56.98:495,57,0	1/1:3,22:25:35.78:536,36,0	0/1:23,0:23:34.54:225,0,35	1/1:0,10:10:29.99:260,30,0
chr10	38188263	.	AAAT	A	1319.77	PASS	AB=0.947;AC=14;AF=0.250;AN=56;BaseQRankSum=-6.285;DP=542;FS=13.943;HRun=0;HaplotypeScore=128.4184;InbreedingCoeff=0.1196;MQ=73.77;MQ0=0;MQRankSum=-1.503;QD=6.17;ReadPosRankSum=-2.297;VQSLOD=1.0499;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:63.05:0,63,1098	0/0:10,0:10:27:0,27,239	0/0:26,0:21:49.02:0,49,708	0/0:16,0:15:25.30:0,25,442	0/1:24,0:24:1.95:2,0,53	0/0:28,0:28:77.97:0,78,664	0/0:16,0:16:41.99:0,42,395	0/1:36,1:37:49.93:117,0,50	0/0:27,0:27:0.49:0,0,25	0/0:33,0:33:94.23:0,94,823	0/0:18,0:18:48.01:0,48,472	1/1:0,10:10:27.09:414,27,0	0/1:11,0:11:1.54:2,0,7	0/0:12,0:12:12.46:0,12,31	0/1:20,1:21:44.01:66,0,44	0/0:21,0:21:19.94:0,20,48	0/0:25,0:24:0.58:0,1,41	0/0:18,0:18:47.99:0,48,411	0/1:24,0:24:3.26:3,0,28	0/1:20,0:20:25.78:91,0,26	0/1:10,0:10:28.69:29,0,46	0/1:8,0:8:3.33:10,0,3	1/1:0,18:18:38.87:601,39,0	0/1:1,5:6:13.72:127,0,14	0/0:20,0:20:59.99:0,60,515	0/0:25,0:25:72.01:0,72,685	0/1:25,0:25:12.07:12,0,120	0/0:10,0:10:29.99:0,30,256
chr10	38188264	.	AAT	A	3549.83	PASS	AB=1.000;AC=31;AF=0.554;AN=56;BaseQRankSum=8.998;DP=543;FS=13.938;HRun=0;HaplotypeScore=111.3579;InbreedingCoeff=0.9245;MQ=72.98;MQ0=0;MQRankSum=-1.158;QD=11.83;ReadPosRankSum=0.175;VQSLOD=2.5895;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:66.12:0,66,988	0/0:10,0:10:26.15:0,26,154	0/0:25,0:20:36.11:0,36,566	0/0:17,0:16:26.79:0,27,366	1/1:23,1:24:47.08:319,47,0	0/0:28,0:28:75.11:0,75,412	0/0:17,0:17:43.54:0,44,285	1/1:37,0:37:99:511,100,0	1/1:25,2:27:54.54:297,55,0	0/0:33,0:33:69.33:0,69,478	0/0:17,0:17:46.17:0,46,282	1/1:10,0:10:26.81:193,27,0	1/1:10,1:11:16.40:98,16,0	1/1:12,0:12:27.10:125,27,0	1/1:21,0:21:28.19:173,28,0	1/1:21,0:21:42.85:180,43,0	1/1:23,2:24:17.71:178,18,0	0/0:17,0:17:46.12:0,46,247	1/1:23,1:24:62.79:326,63,0	1/1:19,2:21:37.87:363,38,0	1/1:10,0:10:3.63:90,4,0	1/1:7,1:8:22.08:136,22,0	1/1:18,0:18:38.56:287,39,0	0/1:6,0:6:2.96:53,0,3	0/0:20,0:20:57.62:0,58,307	0/0:24,0:24:69.32:0,69,421	1/1:25,0:25:16.41:222,16,0	0/0:11,0:11:31.68:0,32,171
chr10	38188265	.	AT	A	8682.26	PASS	AB=1.000;AC=39;AF=0.696;AN=56;BaseQRankSum=0.594;DP=537;FS=4.678;HRun=1;HaplotypeScore=82.3344;InbreedingCoeff=0.4548;MQ=72.32;MQ0=0;MQRankSum=-2.559;QD=19.69;ReadPosRankSum=6.368;VQSLOD=5.1152;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:66.03:0,66,766	0/0:11,0:11:7.79:0,8,82	0/0:22,0:19:25.05:0,25,437	0/0:15,0:14:27.65:0,28,313	1/1:2,21:23:64.69:812,65,0	0/1:28,0:28:10.10:10,0,48	0/1:16,0:16:8.84:9,0,90	1/1:1,36:37:99:1417,111,0	1/1:3,24:27:60.09:786,60,0	0/1:33,0:33:15.09:15,0,89	0/1:17,0:17:10.33:10,0,63	1/1:10,0:10:26.07:140,26,0	1/1:1,10:11:18.01:227,18,0	1/1:0,12:12:30.10:414,30,0	1/1:2,19:21:43.96:572,44,0	1/1:0,21:21:48.16:667,48,0	1/1:3,22:25:32.43:448,32,0	0/1:17,0:17:10.58:13,0,11	1/1:1,23:24:69.12:881,69,0	1/1:12,9:21:55.66:600,56,0	1/1:6,4:10:25.65:280,26,0	1/1:1,7:8:23.67:265,24,0	1/1:18,0:18:37.73:205,38,0	1/1:6,0:6:9.59:49,10,0	0/1:20,0:20:5.45:5,0,15	0/0:24,0:24:12.16:0,12,81	1/1:6,19:25:62.22:841,62,0	0/1:11,0:11:10.35:14,0,10
chr10	38188542	.	CA	C	5742.66	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=13.664;DP=663;FS=0.000;HRun=4;HaplotypeScore=66.2304;InbreedingCoeff=0.9996;MQ=78.26;MQ0=0;MQRankSum=-0.883;QD=33.78;ReadPosRankSum=1.819;VQSLOD=5.4363;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,138,1895	1/1:0,15:15:36.11:428,36,0	0/0:26,1:25:52.93:0,53,638	0/0:21,0:21:60.10:0,60,763	0/0:36,0:36:99:0,105,1449	1/1:0,20:20:60.18:720,60,0	1/1:0,11:11:33.10:396,33,0	0/0:31,0:31:84.24:0,84,1108	0/0:23,0:23:63.21:0,63,882	1/1:1,34:35:99:1212,102,0	1/1:0,17:17:48.15:575,48,0	0/0:28,0:28:75.25:0,75,1050	0/0:20,0:20:60.18:0,60,810	0/0:24,0:24:72.24:0,72,1004	0/0:32,0:32:93.30:0,93,1287	0/0:21,0:21:60.20:0,60,838	0/0:25,0:25:69.18:0,69,912	1/1:0,9:9:27.08:324,27,0	0/0:22,0:21:57.19:0,57,798	0/0:33,0:33:96.32:0,96,1343	0/0:23,0:23:69.23:0,69,962	0/0:16,0:16:48.15:0,48,656	0/0:26,0:26:78.26:0,78,1091	0/0:13,0:13:39.13:0,39,546	1/1:0,19:19:54.17:648,54,0	1/1:1,31:32:93.29:1115,93,0	0/0:23,0:23:66.22:0,66,922	1/1:2,10:12:27.08:324,27,0
chr10	38189904	.	TTGTGTGTG	T	661.14	PASS	AB=0.947;AC=9;AF=0.188;AN=48;BaseQRankSum=3.156;DP=605;FS=3.551;HRun=0;HaplotypeScore=154.5394;InbreedingCoeff=0.1549;MQ=66.86;MQ0=20;MQRankSum=1.873;QD=4.47;ReadPosRankSum=0.377;VQSLOD=2.6555;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:35.82:0,36,616	./.	./.	./.	0/0:23,0:23:2.90:0,3,102	1/1:17,0:17:2.01:21,2,0	0/1:23,0:27:33.49:56,0,33	0/0:25,0:25:21.07:0,21,651	0/0:18,0:19:11.72:0,12,298	0/1:33,0:31:30.23:220,0,30	0/1:7,0:8:20.50:128,0,21	0/0:31,0:31:48.02:0,48,1607	0/0:19,0:19:19.62:0,20,452	0/0:22,0:22:18.06:0,18,535	0/0:18,0:18:21.07:0,21,672	0/0:23,0:23:21.80:0,22,709	0/0:16,0:14:9.03:0,9,283	0/1:22,0:21:48.81:168,0,49	0/0:27,0:25:15.05:0,15,405	0/0:17,0:17:18.06:0,18,571	0/0:18,0:19:3.01:0,3,40	0/0:27,0:27:21.07:0,21,754	0/0:15,0:14:12.04:0,12,390	0/0:35,0:34:33.07:0,33,983	./.	0/1:22,0:22:69.82:70,0,75	0/0:19,0:16:18.57:0,19,476	1/1:17,0:17:10.88:131,11,0
chr10	38189942	.	GTGTGTGAGAC	G	2468.98	PASS	AB=1.000;AC=16;AF=0.320;AN=50;BaseQRankSum=-0.655;DP=444;FS=5.797;HRun=0;HaplotypeScore=115.9007;InbreedingCoeff=0.6532;MQ=42.40;MQ0=38;MQRankSum=2.522;QD=13.64;ReadPosRankSum=1.212;VQSLOD=1.4629;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:28:7.50:0,8,273	./.	./.	./.	0/0:15,0:14:3.01:0,3,56	1/1:23,0:19:2.68:69,3,0	1/1:25,0:24:12.04:265,12,0	0/0:24,0:22:65.15:0,65,759	0/0:15,0:15:14.06:0,14,181	1/1:2,13:13:22.99:414,23,0	1/1:15,0:15:14.93:340,15,0	0/1:28,0:27:99:112,0,920	0/0:16,0:16:24.88:0,25,292	0/0:18,0:17:18.06:0,18,301	0/0:19,0:18:20.93:0,21,365	0/0:16,0:16:23.79:0,24,437	0/0:14,0:9:7.80:0,8,263	1/1:18,0:14:18.55:597,19,0	0/0:8,0:7:20.52:0,21,267	0/0:12,0:12:18.06:0,18,289	0/0:11,0:8:2.98:0,3,21	0/0:20,0:18:21.07:0,21,427	0/0:13,0:12:12.02:0,12,247	0/1:32,0:28:99:202,0,595	0/0:10,0:10:0.47:0,0,1	1/1:20,0:20:31.41:376,31,0	0/0:13,0:11:16.06:0,16,277	1/1:5,0:5:14.98:270,15,0
chr10	38189947	.	TGAGACAGAGA	T	1373.32	PASS	AB=1.000;AC=32;AF=0.696;AN=46;BaseQRankSum=4.822;DP=426;FS=52.831;HRun=0;HaplotypeScore=113.2079;InbreedingCoeff=0.0770;MQ=41.52;MQ0=34;MQRankSum=3.298;QD=4.08;ReadPosRankSum=1.283;VQSLOD=-0.1585;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:28:0.41:0,0,611	./.	./.	./.	1/1:15,0:14:2.92:17,3,0	1/1:5,2:19:2.60:10,3,0	1/1:7,19:26:11.36:65,11,0	0/0:22,0:21:25.96:0,26,252	0/1:18,0:18:59.80:60,0,72	1/1:15,0:13:21.43:165,21,0	1/1:13,1:14:13.15:77,13,0	0/1:25,0:24:99:134,0,115	0/1:16,0:16:29.84:30,0,256	1/1:17,0:16:8.27:45,8,0	1/1:17,0:16:9.82:69,10,0	0/1:15,0:15:53.55:54,0,59	0/1:14,0:9:20.59:21,0,282	1/1:15,0:11:17.09:173,17,0	0/1:7,0:6:21.53:22,0,38	1/1:16,0:16:17.50:129,17,0	./.	1/1:20,0:18:11.84:80,12,0	0/1:12,0:11:12.91:13,0,57	0/1:30,0:26:2.49:2,0,132	./.	1/1:2,0:18:28.71:290,29,0	0/0:11,0:8:8.89:0,9,94	1/1:3,0:3:8.93:67,9,0
chr10	38191453	.	A	AGAACCCTGCTCCGG	11384.49	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=1.765;DP=534;FS=2.983;HRun=0;HaplotypeScore=202.1857;InbreedingCoeff=0.9538;MQ=80.72;MQ0=0;MQRankSum=-12.309;QD=73.45;ReadPosRankSum=-5.003;VQSLOD=3.4463;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:78.27:0,78,2951	1/1:13,0:13:15.01:677,15,0	0/0:16,0:16:9.02:0,9,206	0/0:16,0:16:15.05:0,15,419	0/0:7,0:7:15.05:0,15,569	1/1:19,7:26:45.11:2530,45,0	1/1:30,5:35:51.14:2773,51,0	0/0:15,0:15:27.08:0,27,834	0/0:25,0:25:57.13:0,57,2068	1/1:10,2:12:18.06:746,18,0	1/1:6,3:9:9.03:606,9,0	0/0:20,0:20:51.18:0,51,1831	0/0:24,0:24:63.22:0,63,2455	0/0:17,0:17:33.11:0,33,1249	0/0:8,0:8:15.05:0,15,550	0/0:19,0:19:54.19:0,54,2051	0/0:24,0:24:51.17:0,51,1893	1/1:16,2:19:24.08:1354,24,0	0/0:20,0:20:30.10:0,30,1103	0/0:12,0:12:30.10:0,30,1131	0/0:51,0:51:99:0,111,3885	0/0:16,0:16:39.13:0,39,1475	0/0:6,0:6:12.04:0,12,407	0/0:33,0:33:72.25:0,72,2730	1/1:10,3:13:8.99:425,9,0	1/1:14,4:19:21.06:1056,21,0	0/0:10,0:10:27.09:0,27,952	1/1:4,5:9:18.06:1216,18,0
chr10	38191944	.	C	CCG	368.56	PASS	AC=14;AF=0.304;AN=46;BaseQRankSum=0.481;DP=160;FS=7.063;HRun=0;HaplotypeScore=31.7760;InbreedingCoeff=0.7211;MQ=95.24;MQ0=4;MQRankSum=-1.389;QD=10.53;ReadPosRankSum=-1.498;VQSLOD=1.5645;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:18.47:0,18,180	1/1:2,0:2:5.99:50,6,0	0/0:25,0:12:12.48:0,12,204	0/0:15,0:10:14.68:0,15,97	./.	1/1:3,0:3:6.01:71,6,0	1/1:6,6:12:14.97:181,15,0	0/0:11,0:11:24.38:0,24,228	0/0:5,0:5:9.01:0,9,89	1/1:6,0:6:8.02:55,8,0	./.	0/0:3,0:3:8.88:0,9,67	./.	0/0:4,0:4:12:0,12,105	0/0:2,0:2:3:0,3,27	0/0:4,0:4:9.01:0,9,85	0/0:4,0:4:9.01:0,9,86	1/1:1,5:6:8.86:112,9,0	0/0:7,0:7:15.48:0,15,149	0/0:3,0:3:8.97:0,9,76	0/0:17,0:17:36.07:0,36,387	./.	0/0:2,0:2:6.01:0,6,71	0/0:3,0:3:6:0,6,52	1/1:3,0:3:5.84:39,6,0	1/1:3,0:3:2.87:17,3,0	0/0:6,0:6:14.88:0,15,130	./.
chr10	38191953	.	CCT	C	1166.27	PASS	AB=1.000;AC=33;AF=0.717;AN=46;BaseQRankSum=-1.534;DP=144;FS=6.308;HRun=0;HaplotypeScore=24.0758;InbreedingCoeff=0.2310;MQ=101.87;MQ0=4;MQRankSum=-2.576;QD=12.15;ReadPosRankSum=2.161;VQSLOD=2.0837;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:23.93:0,24,275	./.	0/0:30,0:16:5.84:0,6,239	0/1:13,0:8:3.30:3,0,13	./.	1/1:1,0:1:2.74:12,3,0	1/1:8,0:8:11.59:63,12,0	1/1:1,8:9:23.92:241,24,0	1/1:4,1:5:8.35:70,8,0	0/1:7,0:7:10.67:42,0,11	1/1:1,0:1:2.97:20,3,0	0/1:5,0:5:14.66:15,0,64	1/1:1,0:1:2.99:24,3,0	0/1:2,0:2:3.87:4,0,20	0/0:1,0:1:2.04:0,2,6	1/1:4,0:4:4.87:17,5,0	1/1:1,1:2:5.38:50,5,0	0/0:4,0:4:0.23:0,0,2	1/1:0,7:7:17.89:179,18,0	1/1:3,0:3:5.97:62,6,0	1/1:2,14:16:24.03:295,24,0	1/1:2,0:2:5.94:41,6,0	0/1:3,0:3:15.79:32,0,16	./.	./.	1/1:2,0:2:2.50:9,2,0	1/1:0,5:5:9.03:123,9,0	./.
chr10	38191954	.	CT	C	954.46	PASS	AB=1.000;AC=41;AF=0.891;AN=46;BaseQRankSum=-0.491;DP=150;FS=5.314;HRun=1;HaplotypeScore=27.6473;InbreedingCoeff=0.1782;MQ=101.65;MQ0=4;MQRankSum=-2.586;QD=7.07;ReadPosRankSum=2.403;VQSLOD=0.9130;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:23.59:0,24,222	./.	0/1:29,0:16:5.20:5,0,194	0/1:13,0:9:6.52:7,0,40	./.	1/1:1,0:1:2.74:12,3,0	1/1:9,0:9:14.22:78,14,0	1/1:9,0:9:23.27:136,23,0	1/1:5,0:5:8.90:77,9,0	1/1:5,0:5:6:50,6,0	1/1:3,0:3:2.97:20,3,0	1/1:6,0:6:3:27,3,0	1/1:2,0:2:2.99:24,3,0	1/1:2,0:2:3:25,3,0	1/1:2,0:2:2.97:20,3,0	1/1:0,4:4:6.02:81,6,0	1/1:1,1:2:5.93:57,6,0	1/1:4,0:4:7.74:33,8,0	1/1:7,0:7:17.56:106,18,0	1/1:3,0:3:5.93:40,6,0	1/1:16,0:16:23.40:136,23,0	1/1:2,0:2:5.94:41,6,0	0/1:3,0:3:1.79:32,0,2	./.	./.	1/1:3,0:2:2.60:10,3,0	1/1:5,0:5:8.82:55,9,0	./.
chr10	38196014	.	T	TACACACAC	11177.72	PASS	AB=0.636;AC=48;AF=0.857;AN=56;BaseQRankSum=6.739;DP=703;FS=1.235;HRun=0;HaplotypeScore=236.8555;InbreedingCoeff=0.5794;MQ=59.79;MQ0=9;MQRankSum=-4.946;QD=19.01;ReadPosRankSum=1.894;VQSLOD=4.0956;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:49:87.57:0,88,2253	1/1:7,0:8:6.02:209,6,0	0/0:39,0:24:30.04:0,30,493	0/0:26,0:20:13.73:0,14,282	1/1:4,0:17:29.53:256,30,0	1/1:19,0:24:8.60:292,9,0	1/1:23,1:27:27.09:852,27,0	1/1:21,0:34:29.27:433,29,0	1/1:7,0:22:29.96:247,30,0	1/1:34,1:37:60.17:1684,60,0	1/1:16,0:20:14.04:406,14,0	1/1:15,0:15:12.04:438,12,0	1/1:5,0:22:35.96:296,36,0	1/1:6,0:22:40.50:323,40,0	1/1:7,0:23:47.93:431,48,0	1/1:8,0:21:11.99:99,12,0	0/1:5,0:29:33.04:436,0,33	1/1:13,1:15:9.03:274,9,0	0/1:13,0:21:33.54:226,0,34	1/1:13,0:29:8.24:170,8,0	1/1:22,0:44:44.25:495,44,0	1/1:6,0:18:5.84:133,6,0	1/1:21,0:23:6.02:216,6,0	1/1:27,0:28:20.31:709,20,0	1/1:15,1:18:15.05:507,15,0	1/1:14,0:19:30.10:864,30,0	1/1:9,0:26:41.22:353,41,0	1/1:13,2:20:27.09:828,27,0
chr10	38198940	.	T	TAAAACAAAAC	29398.79	PASS	AB=0.985;AC=44;AF=0.815;AN=54;BaseQRankSum=-2.584;DP=641;FS=11.054;HRun=0;HaplotypeScore=216.9734;InbreedingCoeff=0.7681;MQ=56.88;MQ0=5;MQRankSum=-8.792;QD=55.36;ReadPosRankSum=-5.556;VQSLOD=2.1376;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:67.47:0,67,2355	1/1:8,4:12:24.08:1082,24,0	0/1:32,0:19:15.84:16,0,98	0/1:32,0:19:5.44:5,0,155	1/1:22,0:26:45.15:1937,45,0	1/1:17,9:26:42.14:1832,42,0	1/1:15,3:18:27.09:1223,27,0	1/1:37,0:34:51.18:1725,51,0	1/1:19,0:23:24.08:959,24,0	1/1:15,8:25:39.09:1745,39,0	1/1:13,7:21:36.59:1638,37,0	0/0:4,0:25:54.19:0,54,1250	1/1:13,0:18:27.09:1099,27,0	1/1:11,0:22:39.13:1538,39,0	1/1:16,0:24:33.11:1439,33,0	1/1:24,0:29:39.13:1677,39,0	./.	1/1:14,7:22:27.09:1080,27,0	1/1:27,0:31:35.82:1242,36,0	1/1:29,0:36:54.19:2177,54,0	1/1:9,0:9:15.04:480,15,0	1/1:14,0:17:18.06:765,18,0	0/0:3,0:19:48.16:0,48,1125	0/0:10,0:17:12.04:0,12,279	1/1:15,8:24:39.13:1792,39,0	1/1:8,13:21:51.18:2393,51,0	1/1:16,0:17:24.08:972,24,0	1/1:6,2:8:12.04:582,12,0
chr10	38201066	.	CAT	C	4214.35	PASS	AB=0.990;AC=24;AF=0.429;AN=56;BaseQRankSum=11.502;DP=1024;FS=10.580;HRun=0;HaplotypeScore=185.1699;InbreedingCoeff=-0.4599;MQ=62.29;MQ0=11;MQRankSum=0.799;QD=5.72;ReadPosRankSum=4.041;VQSLOD=3.4852;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:68,0:68:99:0,151,2927	0/1:3,0:3:16.03:16,0,31	0/0:52,0:30:72.95:0,73,879	0/0:47,0:31:69.20:0,69,945	1/1:22,0:21:16.92:198,17,0	0/1:29,2:31:99:240,0,211	0/1:41,0:41:99:216,0,311	0/1:67,0:61:99:356,0,266	0/1:33,0:33:47.54:240,0,48	0/1:28,1:27:99:277,0,139	0/1:21,1:22:99:184,0,184	0/0:34,0:34:90.19:0,90,1445	0/1:34,0:33:38.47:207,0,38	1/1:37,0:36:13.84:253,14,0	0/1:45,0:45:86.15:206,0,86	0/1:46,0:46:99:226,0,150	0/1:32,0:33:96.44:155,0,96	0/1:28,1:29:99:150,0,293	0/1:19,0:14:46.71:73,0,47	0/1:27,0:27:16.70:166,0,17	0/1:98,0:95:99:433,0,181	0/1:28,0:28:80.57:119,0,81	0/0:39,0:39:99:0,107,1519	0/0:47,0:47:99:0,114,1884	0/1:31,0:30:23.26:23,0,358	0/1:26,0:26:99:220,0,172	0/1:27,0:27:33.55:189,0,34	0/1:9,0:9:46.56:67,0,47
chr10	38201068	.	TAC	T	10547.28	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-8.824;DP=1020;FS=16.448;HRun=0;HaplotypeScore=166.4040;InbreedingCoeff=0.9431;MQ=60.58;MQ0=13;MQRankSum=1.372;QD=20.64;ReadPosRankSum=4.412;VQSLOD=4.3607;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:68,1:69:99:0,123,2343	0/0:3,0:3:6.02:0,6,85	0/0:50,0:27:21.54:0,22,315	0/0:51,0:32:33.01:0,33,646	1/1:12,10:21:57.16:681,57,0	0/0:29,0:29:3.46:0,3,596	0/0:40,0:40:45.18:0,45,938	1/1:23,44:61:99:1434,100,0	1/1:6,27:33:63.20:775,63,0	0/0:30,0:27:11.41:0,11,518	0/0:22,0:22:17.23:0,17,508	0/0:33,0:33:77.29:0,77,1219	1/1:6,27:32:60.02:715,60,0	1/1:4,32:35:60.19:738,60,0	1/1:6,39:45:69.22:849,69,0	1/1:9,36:45:75.23:919,75,0	1/1:8,22:30:54.12:647,54,0	0/0:29,0:29:34.90:0,35,768	1/1:11,8:13:7.13:270,7,0	1/1:3,24:27:53.70:664,54,0	1/1:22,74:94:99:1691,134,0	1/1:5,22:29:47.81:545,48,0	0/0:40,0:40:87.24:0,87,1281	0/0:45,1:46:74.46:0,74,1665	0/0:31,0:30:70.12:0,70,952	0/0:27,0:27:40.62:0,41,627	1/1:4,21:27:53.79:618,54,0	0/0:9,0:9:15.45:0,15,181
chr10	38201164	.	T	TAC	8799.08	PASS	AB=0.723;AC=22;AF=0.393;AN=56;BaseQRankSum=-7.294;DP=1076;FS=2.604;HRun=0;HaplotypeScore=144.3190;InbreedingCoeff=0.6571;MQ=55.22;MQ0=15;MQRankSum=2.298;QD=20.90;ReadPosRankSum=-1.281;VQSLOD=5.1431;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:66:69.50:0,69,348	1/1:4,7:11:15.05:229,15,0	0/0:50,0:20:14.65:0,15,132	0/1:37,0:12:18.81:31,0,19	0/0:23,0:24:56.72:0,57,612	1/1:8,18:28:45.15:713,45,0	1/1:19,37:57:52.15:1061,52,0	0/0:46,0:40:53.33:0,53,588	0/0:38,0:38:69.19:0,69,799	1/1:12,26:38:33.18:1035,33,0	1/1:18,7:25:45.12:642,45,0	1/1:15,22:37:11.24:1045,11,0	0/0:34,0:34:25.68:0,26,699	0/0:37,0:38:86.81:0,87,970	0/0:47,0:48:99:0,102,1144	0/0:41,0:42:78.02:0,78,861	0/0:32,0:33:72.82:0,73,827	1/1:17,12:27:54.17:823,54,0	0/0:25,0:25:41.70:0,42,468	0/0:27,0:27:72.19:0,72,829	0/0:124,2:120:99:0,100,2047	0/0:38,0:39:93.11:0,93,1071	0/1:11,15:26:88.60:520,0,89	0/1:17,24:41:84.92:655,0,85	1/1:21,7:29:1.41:579,1,0	0/1:18,26:44:64.06:967,0,64	0/0:17,0:17:27.08:0,27,319	1/1:10,9:19:36.07:499,36,0
chr10	38201256	.	G	GAC	7816.50	PASS	AB=0.741;AC=40;AF=0.714;AN=56;BaseQRankSum=-0.683;DP=1040;FS=22.098;HRun=0;HaplotypeScore=198.8374;InbreedingCoeff=0.0946;MQ=48.69;MQ0=37;MQRankSum=3.868;QD=9.03;ReadPosRankSum=0.014;VQSLOD=3.0692;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:29,21:46:29.68:865,0,30	0/0:13,0:13:15.03:0,15,163	0/0:68,0:11:21.01:0,21,222	0/0:93,0:20:20.03:0,20,222	0/1:20,0:28:0:1,0,0	0/1:19,9:27:52.16:554,0,52	0/1:42,18:60:52.91:995,0,53	1/1:43,0:41:3.90:48,4,0	1/1:25,0:27:8.70:86,9,0	0/1:30,6:35:48.39:396,0,48	1/1:8,11:18:24.08:369,24,0	0/1:11,22:33:12.57:635,0,13	1/1:26,0:31:26.44:207,26,0	1/1:20,0:26:21.81:145,22,0	1/1:32,0:37:18.44:107,18,0	1/1:29,0:36:6.67:119,7,0	1/1:24,0:26:26.54:205,27,0	0/1:24,21:45:99:540,0,142	1/1:12,0:27:33.58:266,34,0	1/1:9,1:30:7.06:27,7,0	1/1:78,0:80:12.02:92,12,0	1/1:26,0:33:11.16:88,11,0	1/1:17,5:21:0.42:461,0,0	0/1:23,9:30:32.30:396,0,32	0/1:13,25:36:99:460,0,121	1/1:15,14:30:11.33:494,11,0	1/1:4,0:22:9.66:33,10,0	0/1:16,2:18:9.78:225,0,10
chr10	38202195	.	G	GT	11777.55	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-12.380;DP=639;FS=3.427;HRun=8;HaplotypeScore=56.1047;InbreedingCoeff=0.9860;MQ=64.65;MQ0=2;MQRankSum=-1.629;QD=24.18;ReadPosRankSum=3.328;VQSLOD=5.6668;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,102,933	1/1:3,5:8:9.03:104,9,0	0/0:28,0:20:34.72:0,35,392	0/0:20,0:17:22.41:0,22,228	1/1:0,18:19:47.93:517,48,0	1/1:2,19:21:51.15:589,51,0	1/1:5,16:21:33.10:381,33,0	1/1:13,18:30:54.13:608,54,0	1/1:5,18:23:48.14:554,48,0	1/1:5,24:28:63.16:709,63,0	1/1:3,17:20:20.63:475,21,0	0/0:20,0:20:54.03:0,54,494	1/1:0,23:23:48.14:554,48,0	1/1:2,15:17:30.09:346,30,0	1/1:2,15:17:39.12:450,39,0	1/1:2,20:22:57.17:658,57,0	1/1:3,22:25:57.17:658,57,0	1/1:3,17:20:42.12:485,42,0	1/1:7,12:18:35.94:395,36,0	1/1:3,25:28:72.21:831,72,0	1/1:0,14:14:24.07:277,24,0	1/1:4,24:28:66.15:745,66,0	0/0:16,0:16:45.02:0,45,412	0/0:30,0:30:78.03:0,78,713	1/1:7,22:29:51.15:589,51,0	1/1:4,19:23:51.13:574,51,0	1/1:3,30:33:81.07:935,81,0	1/1:2,14:16:30.09:346,30,0
chr10	38202955	.	TG	T	7436.99	PASS	AB=1.000;AC=51;AF=0.911;AN=56;BaseQRankSum=-1.068;DP=481;FS=0.637;HRun=10;HaplotypeScore=59.7270;InbreedingCoeff=0.8030;MQ=89.94;MQ0=0;MQRankSum=-4.884;QD=17.10;ReadPosRankSum=5.836;VQSLOD=5.0826;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:23:47.92:0,48,485	1/1:1,4:5:9:78,9,0	0/0:22,1:23:15.84:0,16,335	0/1:19,0:19:4.94:5,0,140	1/1:9,17:26:59.89:511,60,0	1/1:6,20:26:45.35:456,45,0	1/1:1,12:13:32.99:286,33,0	1/1:4,19:23:44.95:391,45,0	1/1:3,15:18:44.99:390,45,0	1/1:4,14:18:47.96:409,48,0	1/1:3,10:13:29.99:260,30,0	1/1:3,0:21:36.67:108,37,0	1/1:2,12:14:38.98:335,39,0	1/1:3,12:16:38.03:319,38,0	1/1:5,14:19:44.99:391,45,0	1/1:2,12:14:35.99:313,36,0	1/1:3,11:15:32.03:266,32,0	1/1:2,11:13:26.99:234,27,0	1/1:3,9:12:29.96:253,30,0	1/1:7,12:19:20.60:337,21,0	1/1:1,7:8:17.99:156,18,0	1/1:2,11:13:29.99:260,30,0	1/1:2,0:18:34.47:102,34,0	1/1:5,0:19:24.43:72,24,0	1/1:5,17:22:53.98:466,54,0	1/1:4,13:17:41.99:364,42,0	1/1:10,19:29:62.98:545,63,0	1/1:0,5:5:15:130,15,0
chr10	38205198	.	CTG	C	2020.55	PASS	AB=1.000;AC=38;AF=0.792;AN=48;BaseQRankSum=-0.923;DP=441;FS=0.000;HRun=0;HaplotypeScore=93.8472;InbreedingCoeff=-0.0782;MQ=43.31;MQ0=33;MQRankSum=0.215;QD=4.92;ReadPosRankSum=-0.856;VQSLOD=1.9707;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:37,0:35:37.53:38,0,440	1/1:7,1:7:10.38:59,10,0	./.	./.	0/1:17,0:16:25.98:50,0,26	1/1:20,0:18:11.72:77,12,0	1/1:3,12:13:3.01:33,3,0	1/1:3,16:17:44.93:315,45,0	0/1:14,0:13:12.50:33,0,12	0/1:9,0:7:2.39:49,0,2	1/1:13,0:11:0.06:1,0,0	1/1:23,0:22:20.20:188,20,0	0/1:19,0:19:37.08:66,0,37	1/1:21,0:21:3.46:25,3,0	1/1:16,0:12:5.59:35,6,0	1/1:18,0:17:14.18:105,14,0	0/1:16,0:14:39.86:47,0,40	1/1:14,0:11:9.81:62,10,0	1/1:14,0:11:2.73:201,3,0	0/0:13,0:13:5.98:0,6,47	0/1:16,0:12:23.86:181,0,24	0/1:18,0:16:15.68:16,0,22	./.	1/1:29,0:26:28.99:136,29,0	1/1:23,0:21:25.56:189,26,0	1/1:19,0:18:23.14:125,23,0	1/1:13,0:11:11.22:126,11,0	./.
chr10	38205200	.	GTC	G	462.16	PASS	AB=0.981;AC=15;AF=0.313;AN=48;BaseQRankSum=-1.342;DP=437;FS=3.534;HRun=0;HaplotypeScore=100.3959;InbreedingCoeff=0.1538;MQ=43.53;MQ0=33;MQRankSum=1.534;QD=2.27;ReadPosRankSum=-0.734;VQSLOD=2.1153;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:34:36.84:0,37,398	0/0:8,0:7:12.63:0,13,66	./.	./.	0/1:18,0:17:30.15:30,0,59	0/0:20,0:19:0.52:0,1,34	0/1:16,0:13:9.26:9,0,19	0/0:22,0:20:2:0,2,59	0/0:12,2:13:1.16:0,1,36	0/0:9,0:7:15.78:0,16,120	0/0:14,0:11:5.99:0,6,49	1/1:23,0:23:17.68:125,18,0	0/1:18,0:18:1.46:1,0,139	0/0:12,9:21:14.81:0,15,117	0/1:13,2:11:18.95:28,0,19	0/1:16,1:16:53.80:69,0,54	0/1:15,0:13:2.97:3,0,97	0/0:15,0:12:24.96:0,25,172	0/1:12,0:9:1.83:69,0,2	1/1:13,0:13:0.47:1,0,0	1/1:15,0:11:15.61:87,16,0	0/0:17,0:15:19.72:0,20,163	./.	0/1:29,0:26:2.44:123,0,2	0/0:22,0:20:4.64:0,5,154	0/0:19,0:18:40.31:0,40,278	0/1:12,0:11:0.16:54,0,0	./.
chr10	38205206	.	CTGTGTG	C	1191.16	PASS	AB=0.983;AC=16;AF=0.333;AN=48;BaseQRankSum=-0.130;DP=456;FS=5.143;HRun=0;HaplotypeScore=118.3115;InbreedingCoeff=0.4071;MQ=43.37;MQ0=34;MQRankSum=1.068;QD=7.05;ReadPosRankSum=-0.540;VQSLOD=2.1934;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:36:36.09:0,36,745	1/1:7,1:7:9.03:178,9,0	./.	./.	0/0:17,0:16:12.04:0,12,235	1/1:21,0:21:18.06:310,18,0	./.	0/0:24,0:22:19.10:0,19,186	0/0:15,0:14:12.03:0,12,204	0/1:9,0:7:7.48:110,0,7	0/0:12,3:12:0:0,0,0	1/1:17,1:22:3.01:44,3,0	0/0:20,0:20:20.08:0,20,301	1/1:21,0:21:0.47:1,0,0	0/0:14,0:10:3.01:0,3,38	0/0:16,0:15:9.01:0,9,100	0/0:14,0:12:15.03:0,15,261	0/1:12,0:11:24.12:94,0,24	0/0:16,0:13:6.02:0,6,118	0/0:20,0:19:15.05:0,15,282	0/0:16,0:11:6.02:0,6,140	0/0:17,0:15:6.02:0,6,141	./.	1/1:29,0:26:18.05:317,18,0	0/1:19,0:17:20.10:223,0,20	0/1:19,0:18:8.91:48,0,9	0/0:15,0:14:15.04:0,15,226	1/1:2,2:3:2.96:19,3,0
chr10	38205709	.	ATCTCTCTCTC	A	1993.40	PASS	AB=0.893;AC=32;AF=0.593;AN=54;BaseQRankSum=-0.413;DP=355;FS=2.604;HRun=0;HaplotypeScore=117.3592;InbreedingCoeff=0.1938;MQ=59.22;MQ0=6;MQRankSum=0.003;QD=9.10;ReadPosRankSum=2.781;VQSLOD=2.3754;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:63.13:0,63,2140	0/1:5,0:5:0:0,0,0	0/0:28,0:19:6.02:0,6,233	0/0:15,0:9:3.01:0,3,137	1/1:4,1:5:6.02:107,6,0	1/1:7,3:10:5.98:48,6,0	1/1:14,2:17:8.96:183,9,0	1/1:16,5:21:14.93:177,15,0	0/1:8,1:9:56.91:57,0,109	1/1:7,2:9:12.03:252,12,0	1/1:10,0:11:5.91:51,6,0	0/0:3,0:3:3.01:0,3,141	0/1:9,1:11:71.74:72,0,93	1/1:10,1:12:9.01:103,9,0	0/0:6,1:7:3.01:0,3,46	0/1:12,0:12:8.95:9,0,223	0/1:17,3:18:6.91:113,0,7	./.	1/1:4,2:6:2.98:49,3,0	0/1:7,1:10:20.50:157,0,20	1/1:9,0:9:6:76,6,0	0/1:15,3:17:35.31:154,0,35	0/0:12,0:12:9.03:0,9,322	0/0:30,0:29:50.97:0,51,2034	1/1:5,2:7:0.81:19,1,0	0/1:8,1:8:54.97:219,0,55	1/1:9,1:12:15.02:226,15,0	1/1:3,1:3:3.01:87,3,0
chr10	38205711	.	C	CTC	422.88	PASS	AB=1.000;AC=19;AF=0.380;AN=50;BaseQRankSum=-1.455;DP=367;FS=7.017;HRun=0;HaplotypeScore=93.6240;InbreedingCoeff=0.2933;MQ=56.83;MQ0=7;MQRankSum=0.898;QD=2.84;ReadPosRankSum=-0.836;VQSLOD=1.4583;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:38.56:0,39,279	./.	0/0:28,0:18:5.91:0,6,38	0/0:15,0:9:3:0,3,25	0/0:5,0:5:2.56:0,3,23	1/1:11,0:11:0.47:1,0,0	0/0:18,0:17:8.57:0,9,44	0/0:20,0:20:2.88:0,3,15	1/1:10,0:10:6.95:57,7,0	0/1:10,0:10:0.48:0,0,11	1/1:11,0:11:0.94:2,1,0	1/1:3,0:3:3:25,3,0	0/1:14,0:13:3.63:70,0,4	0/0:13,0:13:2.99:0,3,24	1/1:11,0:10:3:28,3,0	0/1:12,0:12:15.64:16,0,89	0/0:20,0:18:5.92:0,6,40	./.	./.	0/0:9,0:9:5.42:0,5,37	0/0:9,0:9:2.99:0,3,24	0/1:17,0:16:16.99:17,0,61	1/1:9,4:14:3.01:34,3,0	1/1:29,0:28:39.61:307,40,0	0/1:7,0:7:0:0,0,0	0/0:9,0:8:6.60:0,7,58	0/0:14,0:13:8.62:0,9,45	0/0:4,0:3:1.55:0,2,4
chr10	38205731	.	C	CTG	943.54	PASS	AB=0.935;AC=29;AF=0.518;AN=56;BaseQRankSum=3.065;DP=360;FS=10.946;HRun=0;HaplotypeScore=101.2446;InbreedingCoeff=-0.0061;MQ=40.74;MQ0=8;MQRankSum=-2.523;QD=3.96;ReadPosRankSum=-2.537;VQSLOD=1.0099;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:77.96:0,78,806	0/1:6,0:6:0:0,0,0	0/0:9,0:3:6.02:0,6,84	0/0:8,0:1:3.01:0,3,45	1/1:8,0:8:0.91:21,1,0	1/1:12,0:11:6.93:50,7,0	0/0:17,0:15:4.63:0,5,22	0/1:17,0:16:51.31:51,0,127	1/1:8,2:10:18.83:176,19,0	0/1:13,0:12:37.12:123,0,37	1/1:11,0:11:10.63:66,11,0	1/1:4,0:4:2.22:7,2,0	1/1:5,7:11:8.94:131,9,0	0/1:12,0:12:8.63:52,0,9	0/1:6,5:10:8.64:40,0,9	0/1:12,1:13:49.70:83,0,50	0/1:18,0:16:8.87:51,0,9	0/0:9,0:9:2.88:0,3,15	0/1:9,0:9:3.11:3,0,108	0/1:15,0:15:7.80:8,0,62	0/1:6,0:6:17.98:18,0,26	0/1:19,2:20:52.26:52,0,54	0/0:14,0:14:11.76:0,12,139	0/0:34,0:33:20.88:0,21,212	1/1:10,0:10:2.55:23,3,0	0/1:5,0:10:0.98:78,0,1	0/1:16,0:15:56.31:56,0,63	1/1:2,0:1:2.84:14,3,0
chr10	38205741	.	C	CTCTG	1462.03	PASS	AB=0.996;AC=31;AF=0.554;AN=56;BaseQRankSum=1.040;DP=356;FS=25.611;HRun=0;HaplotypeScore=110.7262;InbreedingCoeff=-0.0797;MQ=39.18;MQ0=5;MQRankSum=-0.828;QD=5.06;ReadPosRankSum=-0.953;VQSLOD=0.2854;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:65.82:0,66,621	0/1:6,0:6:0.21:0,0,0	0/0:7,0:4:11.73:0,12,70	0/0:13,0:4:2.99:0,3,25	0/1:10,0:10:16.53:17,0,19	1/1:13,0:12:4.60:45,5,0	0/1:18,0:16:24.75:53,0,25	0/1:13,0:12:9.56:13,0,10	1/1:7,0:7:7.36:37,7,0	1/1:12,0:11:2.23:110,2,0	1/1:11,0:11:4.16:42,4,0	1/1:0,4:4:3.01:70,3,0	0/1:13,0:12:1.54:43,0,2	0/1:10,0:10:4.87:32,0,5	1/1:10,0:9:5.67:35,6,0	0/1:11,0:11:35.29:35,0,75	0/1:19,0:18:16.97:119,0,17	1/1:11,0:11:9.87:84,10,0	1/1:11,0:11:10.70:64,11,0	0/1:14,0:14:17.90:78,0,18	0/0:6,0:6:2.99:0,3,23	0/1:20,0:18:40.03:40,0,43	0/1:14,0:14:27.92:108,0,28	1/1:33,0:33:8.96:407,9,0	0/0:11,0:11:0.47:0,0,1	0/1:15,0:13:29.18:152,0,29	0/1:12,0:11:26.20:29,0,26	0/0:2,0:1:1.55:0,2,4
chr10	38205863	.	AGGGAAG	A	1436.51	PASS	AB=1.000;AC=35;AF=0.761;AN=46;BaseQRankSum=-2.042;DP=190;FS=8.801;HRun=0;HaplotypeScore=30.8460;InbreedingCoeff=0.2427;MQ=32.72;MQ0=44;MQRankSum=2.246;QD=10.80;ReadPosRankSum=2.471;VQSLOD=-0.0496;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:19:42.50:0,42,594	1/1:2,0:1:2.94:18,3,0	./.	./.	1/1:6,0:6:1.08:3,1,0	0/1:8,0:6:21.44:21,0,31	0/0:9,0:6:3:0,3,25	1/1:4,6:8:20.92:219,21,0	0/1:9,0:6:3.44:95,0,3	1/1:4,0:2:5.97:46,6,0	0/1:3,0:2:0:0,0,0	0/1:6,0:3:0.62:9,0,1	./.	1/1:5,0:4:7.28:172,7,0	1/1:6,0:3:5.52:120,6,0	0/1:7,0:4:0.56:13,0,1	1/1:8,0:5:8.89:101,9,0	1/1:5,0:2:5.96:43,6,0	1/1:4,4:6:10.21:113,10,0	1/1:3,0:2:3.01:36,3,0	1/1:13,0:9:1.26:64,1,0	./.	./.	0/0:8,0:4:0:0,0,0	1/1:9,0:6:3.77:134,4,0	1/1:2,8:8:14.94:187,15,0	1/1:5,0:4:11.89:117,12,0	1/1:6,0:3:5.94:41,6,0
chr10	38205867	.	AAG	A	1133.63	PASS	AB=1.000;AC=38;AF=0.950;AN=40;BaseQRankSum=-0.526;DP=180;FS=0.000;HRun=0;HaplotypeScore=29.9726;InbreedingCoeff=-0.0113;MQ=33.05;MQ0=41;MQRankSum=0.312;QD=7.51;ReadPosRankSum=0.345;VQSLOD=2.2971;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:22:7.78:8,0,364	1/1:2,0:1:2.94:18,3,0	./.	./.	1/1:7,0:7:1.25:3,1,0	1/1:7,1:6:5.20:35,5,0	./.	1/1:8,0:7:17.91:151,18,0	0/1:10,0:7:0.31:77,0,0	1/1:4,0:2:5.98:66,6,0	./.	1/1:6,0:3:2.90:18,3,0	./.	1/1:6,0:5:9.01:118,9,0	1/1:5,0:3:6.01:90,6,0	1/1:7,0:4:2.84:18,3,0	1/1:9,0:6:8.82:79,9,0	1/1:4,0:2:5.96:43,6,0	1/1:5,0:4:9.85:88,10,0	1/1:2,0:1:2.94:18,3,0	1/1:12,2:9:3:45,3,0	./.	./.	./.	1/1:9,0:7:8.58:106,9,0	1/1:10,0:8:14.87:130,15,0	1/1:4,0:3:8.90:70,9,0	1/1:6,0:3:5.94:41,6,0
chr10	38205925	.	AGC	A	2701.41	PASS	AB=0.532;AC=42;AF=0.750;AN=56;BaseQRankSum=-5.951;DP=342;FS=17.766;HRun=0;HaplotypeScore=60.4838;InbreedingCoeff=0.8481;MQ=80.17;MQ0=14;MQRankSum=-2.832;QD=13.57;ReadPosRankSum=-0.364;VQSLOD=1.6706;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:30:32.33:0,32,249	1/1:6,0:6:14.86:116,15,0	0/0:35,0:19:29.13:0,29,211	0/0:52,0:22:27.56:0,28,206	0/1:1,9:9:0:0,0,0	1/1:14,0:14:23.97:199,24,0	1/1:7,0:6:14.93:120,15,0	1/1:21,0:21:47.57:410,48,0	1/1:9,0:8:22.35:161,22,0	1/1:11,0:11:25.44:227,25,0	0/1:1,6:7:0:0,0,0	0/0:9,0:9:23.62:0,24,178	1/1:7,0:7:17.85:132,18,0	1/1:7,0:6:9:77,9,0	1/1:9,0:9:11.99:101,12,0	1/1:13,0:12:21.37:164,21,0	1/1:9,1:10:20.76:142,21,0	1/1:3,0:3:8.98:74,9,0	1/1:5,0:3:8.98:75,9,0	1/1:6,0:6:11.99:100,12,0	1/1:19,0:17:23.67:179,24,0	1/1:3,0:3:5.92:50,6,0	0/0:4,0:4:11.05:0,11,71	0/0:12,0:11:14.57:0,15,96	1/1:10,0:10:21:182,21,0	1/1:8,0:7:18.43:152,18,0	1/1:7,0:6:14.85:102,15,0	1/1:7,0:7:15.91:124,16,0
chr10	38206677	.	A	AGTGTGT	13294.19	PASS	AB=1.000;AC=49;AF=0.875;AN=56;BaseQRankSum=7.603;DP=640;FS=2.304;HRun=0;HaplotypeScore=254.8984;InbreedingCoeff=0.4993;MQ=59.35;MQ0=4;MQRankSum=-7.758;QD=24.57;ReadPosRankSum=-1.686;VQSLOD=4.3358;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:96.28:0,96,1932	1/1:8,0:8:2.66:78,3,0	0/0:22,0:13:6.49:0,6,95	0/1:28,0:17:18.99:19,0,47	1/1:25,11:37:14.82:416,15,0	1/1:24,0:26:7.95:163,8,0	0/0:35,0:35:1.40:0,1,3	1/1:27,1:27:36.04:770,36,0	1/1:10,12:24:39.13:1185,39,0	1/1:20,0:22:24.08:587,24,0	1/1:13,0:13:2.56:22,3,0	1/1:13,0:13:3.01:78,3,0	1/1:12,6:19:18.06:555,18,0	1/1:11,11:24:30.10:902,30,0	1/1:6,12:23:33.11:926,33,0	1/1:8,7:18:36.10:892,36,0	1/1:16,4:22:33.02:792,33,0	1/1:19,0:21:18.06:424,18,0	1/1:12,2:14:24.06:499,24,0	1/1:22,7:33:26.18:595,26,0	1/1:11,4:15:3.01:54,3,0	1/1:8,11:20:27.09:843,27,0	1/1:23,0:22:11.54:197,12,0	1/1:18,0:18:9.02:166,9,0	1/1:17,0:19:12.03:205,12,0	1/1:25,0:27:33.11:847,33,0	1/1:14,14:33:63.22:1760,63,0	1/1:9,0:11:8.98:322,9,0
chr10	38206695	.	T	TGTGTGTGTGTGTGTGTGCGC	16945.76	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=4.194;DP=640;FS=38.218;HRun=0;HaplotypeScore=419.8069;InbreedingCoeff=-0.5139;MQ=47.09;MQ0=4;MQRankSum=-8.544;QD=29.47;ReadPosRankSum=6.113;VQSLOD=1.6807;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,123,5088	0/1:9,0:9:23.76:369,0,24	0/0:12,0:6:6.49:0,6,95	0/1:21,0:8:21.53:22,0,48	0/1:34,0:33:17.87:114,0,18	0/1:23,0:23:97.96:665,0,98	0/1:35,0:35:48.19:716,0,48	0/1:21,0:20:0.56:1082,0,1	0/1:22,0:22:87.12:299,0,87	0/1:27,0:28:99:3251,0,217	0/1:14,0:14:15.56:16,0,28	1/1:9,0:19:5.06:389,5,0	0/1:18,0:18:11.34:198,0,11	0/1:27,0:27:99:288,0,167	0/1:23,0:23:56.78:57,0,100	0/1:19,0:19:95.70:205,0,96	0/1:22,0:22:82.42:420,0,82	0/1:21,0:21:47.04:1520,0,47	0/1:18,0:18:99:534,0,106	0/1:35,0:35:99:157,0,107	0/0:12,0:12:3.01:0,3,33	0/1:22,0:22:5.14:5,0,146	1/1:16,3:30:6.03:579,6,0	1/1:20,0:21:23.24:610,23,0	0/1:20,0:20:99:314,0,185	0/1:28,0:28:31.93:3395,0,32	0/1:34,0:34:99:562,0,112	1/1:10,0:10:18.70:1179,19,0
chr10	38210286	.	TA	T	5847.10	PASS	AB=0.537;AC=17;AF=0.304;AN=56;BaseQRankSum=18.253;DP=640;FS=3.320;HRun=3;HaplotypeScore=75.1358;InbreedingCoeff=0.9030;MQ=75.93;MQ0=0;MQRankSum=-0.363;QD=32.85;ReadPosRankSum=1.750;VQSLOD=5.3427;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,154,2196	1/1:0,11:11:27.08:334,27,0	0/0:12,0:12:6.35:0,6,321	0/0:12,0:12:26.25:0,26,400	0/0:31,0:31:84.24:0,84,1153	1/1:0,13:13:30.09:372,30,0	1/1:0,24:24:69.22:855,69,0	0/0:37,0:37:99:0,111,1582	0/0:15,0:15:45.15:0,45,645	1/1:0,19:19:57.17:694,57,0	1/1:0,19:19:54.17:669,54,0	0/0:19,0:19:57.18:0,57,802	0/0:17,0:17:51.16:0,51,717	0/0:25,0:25:72.23:0,72,1018	0/0:23,0:23:69.21:0,69,958	0/0:20,0:20:57.17:0,57,787	0/0:33,0:33:96.26:0,96,1321	0/1:4,25:29:14.15:743,0,14	0/0:18,0:18:51.15:0,51,701	0/0:20,0:20:60.18:0,60,828	0/0:19,0:19:57.17:0,57,800	0/0:16,0:16:48.16:0,48,688	0/0:25,0:25:72.21:0,72,982	0/0:34,0:34:99:0,99,1351	1/1:1,15:16:39.12:483,39,0	1/1:0,32:32:96.22:1143,96,0	0/0:34,0:34:99:0,102,1424	1/1:0,15:15:45.14:556,45,0
chr10	38215895	.	C	CTGAATGAATGAATGAA	31827.94	PASS	AB=0.633;AC=46;AF=0.821;AN=56;BaseQRankSum=-2.404;DP=789;FS=24.802;HRun=0;HaplotypeScore=284.6327;InbreedingCoeff=0.7167;MQ=62.53;MQ0=5;MQRankSum=-10.804;QD=46.60;ReadPosRankSum=-5.958;VQSLOD=2.5484;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:81.28:0,81,3225	1/1:5,0:11:20.94:370,21,0	0/0:18,0:14:9.03:0,9,184	0/0:18,0:17:8.89:0,9,173	1/1:25,11:36:39.09:1488,39,0	1/1:9,0:27:45.15:906,45,0	1/1:11,0:23:18.06:427,18,0	1/1:28,0:28:42.12:1378,42,0	1/1:31,8:44:51.18:3036,51,0	0/1:13,0:26:17.50:675,0,17	1/1:7,0:15:27.05:581,27,0	1/1:19,0:39:66.23:1435,66,0	1/1:28,14:48:45.15:2806,45,0	1/1:25,19:46:39.13:2221,39,0	1/1:25,18:44:54.19:3287,54,0	1/1:21,12:35:39.61:2188,40,0	1/1:16,10:26:27.09:1745,27,0	1/1:13,0:21:18.03:293,18,0	1/1:21,3:24:28.52:1256,29,0	1/1:14,15:31:37.60:1422,38,0	1/1:21,2:23:32.81:1451,33,0	1/1:9,7:18:21.03:1068,21,0	0/1:8,0:24:61.41:61,0,225	0/0:8,0:35:42.33:0,42,577	1/1:11,0:34:51.17:1136,51,0	1/1:7,0:29:57.18:1006,57,0	1/1:12,11:24:21.07:1334,21,0	1/1:2,0:7:15.05:258,15,0
chr10	38218069	.	T	TTATC	3414.88	PASS	AB=0.810;AC=38;AF=0.792;AN=48;BaseQRankSum=1.637;DP=692;FS=4.577;HRun=0;HaplotypeScore=131.6449;InbreedingCoeff=0.4641;MQ=55.06;MQ0=20;MQRankSum=-0.307;QD=6.72;ReadPosRankSum=-0.920;VQSLOD=2.5151;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:25:0.22:380,0,0	1/1:9,0:10:12.04:251,12,0	./.	./.	1/1:28,0:32:6.87:51,7,0	1/1:34,0:41:17.97:220,18,0	./.	./.	1/1:21,0:23:1.55:4,2,0	1/1:34,0:31:9.03:182,9,0	0/1:16,6:25:23.19:281,0,23	1/1:22,0:24:18.05:342,18,0	0/1:20,0:23:23.18:363,0,23	1/1:26,0:29:10.53:95,11,0	1/1:24,0:28:6.81:45,7,0	1/1:22,0:24:8.98:114,9,0	1/1:13,0:16:1.54:4,2,0	0/0:16,0:23:7.13:0,7,84	0/0:19,0:18:6.02:0,6,89	0/0:27,0:27:21.14:0,21,288	1/1:20,0:26:3.01:49,3,0	1/1:22,1:22:9.02:126,9,0	1/1:18,2:20:9.03:182,9,0	1/1:18,2:21:15.05:302,15,0	1/1:22,6:29:6.02:112,6,0	1/1:30,0:36:17.28:161,17,0	0/0:31,0:30:21.07:0,21,298	1/1:13,0:12:14.98:151,15,0
chr10	38219196	.	T	TA	10697.69	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-9.120;DP=567;FS=6.940;HRun=10;HaplotypeScore=57.1070;InbreedingCoeff=0.9288;MQ=71.29;MQ0=0;MQRankSum=0.045;QD=22.86;ReadPosRankSum=-1.013;VQSLOD=5.3537;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:50.84:0,51,411	1/1:2,4:6:9.02:96,9,0	0/0:13,0:13:11.93:0,12,98	0/0:10,0:10:7.36:0,7,103	1/1:6,24:31:28.44:492,28,0	1/1:4,18:22:24.15:456,24,0	1/1:1,15:16:39.10:416,39,0	1/1:5,26:31:77.92:743,78,0	1/1:2,15:17:45.11:480,45,0	1/1:6,25:31:75.14:776,75,0	1/1:4,24:28:66.07:678,66,0	0/0:17,1:18:9.96:0,10,288	1/1:1,10:11:24.06:256,24,0	1/1:5,18:23:48.04:496,48,0	1/1:3,16:19:28.13:345,28,0	1/1:3,14:17:39.10:416,39,0	1/1:3,12:15:36.08:378,36,0	1/1:5,12:17:17.09:357,17,0	1/1:5,23:28:47.54:711,48,0	1/1:4,21:25:32.45:538,32,0	1/1:3,16:20:32.85:320,33,0	1/1:3,16:19:42.11:448,42,0	0/0:24,0:24:47.60:0,48,381	0/0:11,0:11:29.93:0,30,243	1/1:3,25:28:69.17:736,69,0	1/1:4,23:27:66.15:696,66,0	1/1:4,22:26:38.45:601,38,0	1/1:1,10:11:5.43:263,5,0
chr10	38219441	.	T	TTCTCTCTCTC	4225.03	PASS	AB=0.964;AC=36;AF=0.643;AN=56;BaseQRankSum=-5.517;DP=681;FS=11.439;HRun=0;HaplotypeScore=174.3871;InbreedingCoeff=0.2989;MQ=60.12;MQ0=12;MQRankSum=-3.022;QD=7.41;ReadPosRankSum=-2.115;VQSLOD=2.8000;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:20.71:0,21,392	0/0:11,0:10:5.74:0,6,100	0/0:33,0:16:1.91:0,2,15	0/1:50,0:18:0:0,0,0	0/0:16,0:19:2.90:0,3,16	0/1:25,0:25:5.03:5,0,245	0/1:24,0:24:56:56,0,119	1/1:35,0:35:8.92:309,9,0	1/1:15,7:22:8.54:438,9,0	0/1:26,0:26:54.40:54,0,394	0/0:12,0:12:11.87:0,12,207	1/1:20,6:27:4.26:129,4,0	1/1:15,0:14:21.07:517,21,0	1/1:22,3:27:3.01:147,3,0	0/1:21,11:34:0:0,0,0	1/1:20,7:28:11.25:349,11,0	1/1:14,0:18:7.58:168,8,0	0/1:12,0:12:24.25:24,0,55	1/1:15,0:18:16.97:235,17,0	1/1:24,0:23:13.81:279,14,0	1/1:30,0:30:11.99:123,12,0	1/1:25,0:25:12.04:310,12,0	1/1:30,0:30:21.05:402,21,0	1/1:26,0:25:15.03:349,15,0	0/1:24,0:24:26.04:26,0,129	0/1:22,0:22:70.75:91,0,71	1/1:18,0:25:9.50:213,10,0	0/0:7,0:6:4.49:0,4,105
chr10	38219465	.	C	CTCTCTC	3429.70	PASS	AB=1.000;AC=35;AF=0.700;AN=50;BaseQRankSum=-2.461;DP=638;FS=0.000;HRun=0;HaplotypeScore=132.7393;InbreedingCoeff=0.0291;MQ=48.64;MQ0=14;MQRankSum=-0.138;QD=7.15;ReadPosRankSum=-3.451;VQSLOD=1.5150;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:36:20.57:0,21,215	0/1:7,0:6:9.34:9,0,46	0/0:14,0:6:2.92:0,3,17	./.	1/1:13,0:13:2.80:13,3,0	0/1:25,0:24:28.88:29,0,68	0/1:30,0:28:11.03:226,0,11	0/1:26,0:26:0.82:13,0,1	1/1:24,0:24:5.84:153,6,0	0/1:33,0:33:99:201,0,138	0/0:13,0:13:6.48:0,6,80	./.	1/1:18,0:16:18.05:320,18,0	1/1:25,0:25:3.01:80,3,0	./.	1/1:32,0:31:8.87:217,9,0	1/1:16,0:15:9.50:255,10,0	0/1:11,0:11:12.51:48,0,13	1/1:14,0:13:11.69:175,12,0	1/1:19,0:18:13.81:277,14,0	1/1:16,5:22:11.99:123,12,0	1/1:29,0:29:12.04:239,12,0	1/1:28,0:28:21.05:376,21,0	1/1:28,0:27:15.03:313,15,0	0/1:22,0:22:43.80:82,0,44	0/1:21,0:21:19.82:166,0,20	1/1:21,0:21:3.48:95,3,0	0/1:16,0:15:18.41:18,0,38
chr10	38219479	.	CTGTG	C	3141.78	PASS	AB=0.995;AC=22;AF=0.407;AN=54;BaseQRankSum=-7.048;DP=592;FS=62.352;HRun=0;HaplotypeScore=117.0030;InbreedingCoeff=-0.1567;MQ=48.62;MQ0=10;MQRankSum=2.437;QD=8.10;ReadPosRankSum=-2.079;VQSLOD=0.1665;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:34,0:33:38.41:38,0,157	1/1:3,1:4:6.02:96,6,0	./.	0/0:9,0:4:9.03:0,9,139	0/1:17,0:17:36.35:37,0,36	0/1:21,0:21:35.33:287,0,35	0/1:30,0:28:32.91:436,0,33	0/1:21,0:21:0.62:1,0,11	0/0:19,0:19:5.11:0,5,81	0/1:34,1:34:49.30:570,0,49	1/1:14,1:16:6.94:323,7,0	0/0:31,0:31:7.46:0,7,747	0/0:22,0:20:8.17:0,8,112	0/0:24,0:24:3.49:0,3,33	1/1:29,0:29:2.38:33,2,0	0/1:29,0:28:32.50:32,0,93	0/1:19,0:18:30.10:30,0,189	0/1:10,0:10:3.93:192,0,4	0/1:10,0:9:0.08:0,0,64	0/1:24,0:23:71.13:71,0,93	0/0:25,0:25:3.64:0,4,48	0/0:25,0:25:8.96:0,9,76	0/0:25,0:25:23.84:0,24,415	0/1:30,0:29:9.97:10,0,481	0/1:20,0:20:34.45:232,0,34	0/1:21,0:21:7.63:483,0,8	0/0:19,0:19:8.32:0,8,84	1/1:15,1:16:2.96:420,3,0
chr10	38220027	.	AAGG	A	730.67	PASS	AB=0.780;AC=21;AF=0.375;AN=56;BaseQRankSum=1.146;DP=259;FS=0.000;HRun=0;HaplotypeScore=51.7064;InbreedingCoeff=0.4987;MQ=54.52;MQ0=16;MQRankSum=-2.983;QD=7.23;ReadPosRankSum=0.620;VQSLOD=1.6749;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:17:11.84:0,12,84	0/0:4,0:4:3.01:0,3,61	0/0:21,0:5:3.18:0,3,56	0/0:24,0:6:11.56:0,12,80	1/1:7,1:8:5.85:58,6,0	0/0:7,0:7:9.01:0,9,146	0/0:7,0:6:6.02:0,6,120	1/1:7,0:4:3.01:35,3,0	1/1:3,2:4:6.02:86,6,0	0/0:9,0:8:9.03:0,9,183	0/0:10,0:10:15.01:0,15,257	0/0:3,0:3:6.02:0,6,122	1/1:3,1:3:3.01:43,3,0	1/1:1,2:3:6:66,6,0	0/1:7,1:8:2.56:100,0,3	1/1:4,4:7:12.04:172,12,0	0/1:4,2:6:29.52:76,0,30	0/0:4,0:3:1.25:0,1,3	1/1:5,0:5:6:59,6,0	1/1:4,1:5:6.02:85,6,0	0/1:19,14:33:7.89:36,0,8	1/1:7,2:8:6.02:86,6,0	0/0:8,0:8:11.97:0,12,159	0/0:10,0:8:12.03:0,12,207	0/0:11,0:11:18.06:0,18,356	0/0:11,0:11:21.02:0,21,384	0/0:2,0:2:0.47:0,0,1	0/0:5,0:5:9.03:0,9,140
chr10	38220186	.	C	CGAA	7581.66	PASS	AB=0.514;AC=23;AF=0.426;AN=54;BaseQRankSum=0.733;DP=712;FS=18.468;HRun=0;HaplotypeScore=103.2391;InbreedingCoeff=0.9431;MQ=53.92;MQ0=34;MQRankSum=1.013;QD=23.19;ReadPosRankSum=-3.698;VQSLOD=2.8067;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:41:95.96:0,96,1213	0/0:5,0:5:14.93:0,15,174	0/0:23,0:16:44.96:0,45,484	0/0:24,0:12:16.41:0,16,326	1/1:2,20:21:35.96:355,36,0	0/0:23,0:21:57.12:0,57,771	0/0:20,0:18:35.94:0,36,469	1/1:42,0:35:81.10:1006,81,0	1/1:21,0:20:48.15:725,48,0	0/0:34,0:33:72.04:0,72,1055	0/0:16,0:16:39.08:0,39,538	0/0:15,0:15:42.11:0,42,569	0/1:1,17:17:0.32:1,0,0	1/1:3,28:29:2.98:21,3,0	1/1:32,0:32:78.09:1075,78,0	./.	1/1:20,0:20:51.10:788,51,0	0/0:19,0:17:48.12:0,48,640	1/1:22,0:19:47.99:582,48,0	1/1:7,14:21:50.97:527,51,0	1/1:48,0:43:99:1403,105,0	1/1:1,24:23:50.94:521,51,0	0/0:25,0:24:57.10:0,57,779	0/0:44,0:44:99:0,105,1452	0/0:23,0:23:57.17:0,57,805	0/0:30,0:29:78.12:0,78,1083	1/1:22,0:18:50.95:578,51,0	0/0:23,0:23:66.20:0,66,970
chr10	38220808	.	CCTAT	C	2246.02	PASS	AB=0.968;AC=18;AF=0.346;AN=52;BaseQRankSum=4.553;DP=742;FS=0.553;HRun=0;HaplotypeScore=133.5153;InbreedingCoeff=0.5115;MQ=67.75;MQ0=5;MQRankSum=2.404;QD=6.66;ReadPosRankSum=1.579;VQSLOD=2.2275;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:20:18.06:0,18,421	0/0:9,0:15:29.88:0,30,454	./.	./.	0/0:23,0:34:11.70:0,12,168	1/1:16,16:32:30.10:462,30,0	1/1:9,5:14:8.99:139,9,0	1/1:42,1:42:2.98:21,3,0	0/0:10,0:20:21.07:0,21,366	0/1:35,1:36:35.22:35,0,1090	0/0:29,0:29:27.08:0,27,532	0/0:21,0:28:0.97:0,1,48	0/0:27,1:28:4.96:0,5,1049	0/1:28,0:28:16.12:16,0,555	0/0:22,0:35:27.09:0,27,489	0/1:37,0:37:12.43:12,0,1203	0/0:18,0:26:12.04:0,12,192	1/1:12,10:22:16.29:274,16,0	0/1:24,3:26:99:109,0,462	1/1:24,12:36:30.06:435,30,0	1/1:11,10:21:18.06:277,18,0	0/0:22,0:22:21.07:0,21,489	0/0:11,0:20:9.03:0,9,136	0/0:14,0:25:17.09:0,17,303	0/0:16,0:25:2.24:0,2,81	0/0:30,1:31:20:0,20,1354	1/1:22,19:41:42.14:647,42,0	0/0:10,0:10:9.03:0,9,204
chr10	38220998	.	C	CTCTA	5336.93	PASS	AB=0.938;AC=21;AF=0.438;AN=48;BaseQRankSum=-5.948;DP=705;FS=6.807;HRun=0;HaplotypeScore=148.1528;InbreedingCoeff=0.4990;MQ=65.42;MQ0=5;MQRankSum=2.107;QD=15.47;ReadPosRankSum=-1.561;VQSLOD=4.0484;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:35:3:0,3,28	0/0:12,0:15:1.76:0,2,4	./.	./.	1/1:21,7:27:33.11:731,33,0	0/0:10,0:17:1.36:0,1,3	0/1:15,0:15:0:0,0,0	./.	0/1:18,7:25:14.85:564,0,15	0/0:29,0:34:14.81:0,15,111	./.	0/0:18,0:26:9.37:0,9,75	1/1:38,0:37:23.78:374,24,0	1/1:26,5:31:33.09:681,33,0	0/0:25,0:30:32.91:0,33,288	0/0:30,0:30:27.06:0,27,365	0/1:34,0:34:0.49:0,0,498	1/1:17,0:22:2.90:16,3,0	1/1:17,1:18:12.04:272,12,0	1/1:23,7:30:39.13:888,39,0	0/1:27,3:30:99:401,0,105	1/1:19,4:23:33.11:689,33,0	0/1:15,0:16:0.08:0,0,0	0/0:24,0:28:3.38:0,3,26	0/0:14,0:15:2.88:0,3,15	0/0:20,0:21:3:0,3,28	1/1:29,5:34:36.11:720,36,0	0/0:8,0:9:3:0,3,28
chr10	38221090	.	G	GGT	9839.24	PASS	AB=0.855;AC=32;AF=0.571;AN=56;BaseQRankSum=1.532;DP=908;FS=2.787;HRun=0;HaplotypeScore=164.7037;InbreedingCoeff=-0.4824;MQ=60.76;MQ0=13;MQRankSum=4.434;QD=12.19;ReadPosRankSum=0.939;VQSLOD=4.8918;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:28,1:36:7.84:8,0,487	1/1:5,13:18:6.93:535,7,0	0/0:55,0:21:6.02:0,6,70	0/0:46,0:22:18.94:0,19,188	0/1:29,0:29:99:101,0,181	0/1:15,9:26:99:540,0,144	0/1:12,12:26:99:489,0,157	0/1:37,0:37:35.14:35,0,188	0/1:32,0:32:12.03:187,0,12	0/1:16,25:45:72.71:1061,0,73	0/1:10,15:25:28.19:524,0,28	1/1:15,22:39:40.25:1188,40,0	1/1:31,0:32:5.45:228,5,0	1/1:48,0:48:22.22:382,22,0	0/1:36,0:36:7.96:184,0,8	0/1:27,0:27:76.07:107,0,76	0/1:32,0:32:80.28:187,0,80	1/1:10,8:18:0.97:482,1,0	0/1:22,0:21:39:74,0,39	0/1:33,0:33:16.15:194,0,16	0/1:65,0:66:5.16:364,0,5	0/1:22,0:22:41.35:90,0,41	0/1:7,11:18:11.10:304,0,11	1/1:9,28:39:53.92:849,54,0	0/1:14,16:31:99:502,0,162	0/1:15,21:36:99:922,0,127	0/1:30,0:30:99:174,0,105	0/1:1,3:4:23.10:129,0,23
chr10	38221111	.	G	GTGCA	15264.19	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-14.393;DP=962;FS=5.367;HRun=0;HaplotypeScore=183.9208;InbreedingCoeff=0.9758;MQ=56.69;MQ0=15;MQRankSum=0.011;QD=31.60;ReadPosRankSum=4.787;VQSLOD=4.5082;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:79.08:0,79,1116	0/0:19,0:19:21.98:0,22,177	0/0:45,0:7:8.99:0,9,102	0/0:48,0:16:21.54:0,22,339	1/1:7,19:34:32.33:586,32,0	0/0:29,0:29:42.94:0,43,575	0/0:32,0:32:26.74:0,27,619	1/1:14,0:35:77.72:1396,78,0	1/1:5,24:33:48.12:1054,48,0	0/0:49,0:48:68.30:0,68,908	0/0:21,0:21:22.67:0,23,207	0/0:42,0:42:26.23:0,26,398	1/1:16,16:35:84.11:1782,84,0	1/1:10,34:51:90.25:2092,90,0	1/1:6,30:42:46.38:1069,46,0	1/1:6,21:29:30.08:664,30,0	1/1:6,19:31:51.11:1045,51,0	0/0:20,0:20:21.78:0,22,244	1/1:7,5:21:45.08:737,45,0	1/1:4,29:37:51.12:1099,51,0	1/1:11,55:82:58.45:2012,58,0	1/1:3,16:23:24.05:510,24,0	0/0:16,0:16:11.34:0,11,108	0/0:42,0:42:30.72:0,31,236	0/0:29,0:29:30.97:0,31,343	0/0:38,0:38:56.93:0,57,736	1/1:11,12:28:57.61:1218,58,0	0/0:5,0:5:8.68:0,9,102
chr10	38226182	.	AAACC	A	9364.93	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=13.595;DP=640;FS=7.194;HRun=0;HaplotypeScore=105.3253;InbreedingCoeff=0.9896;MQ=65.27;MQ0=1;MQRankSum=2.500;QD=29.17;ReadPosRankSum=0.915;VQSLOD=4.2850;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:29:30.10:0,30,521	0/0:13,0:13:30.10:0,30,690	0/0:8,0:8:8.94:0,9,79	0/0:22,0:19:21.07:0,21,396	1/1:4,28:32:83.97:1143,84,0	0/0:28,0:28:63.22:0,63,1412	0/0:16,0:16:21.07:0,21,482	1/1:13,13:26:39.13:574,39,0	1/1:7,15:22:36.12:580,36,0	0/0:23,0:23:51.17:0,51,1188	0/0:29,0:29:69.22:0,69,1487	0/0:22,0:22:48.16:0,48,1074	1/1:3,22:25:57.19:918,57,0	1/1:1,14:15:30.10:483,30,0	1/1:3,24:27:57.19:918,57,0	1/1:0,15:15:30.10:483,30,0	1/1:5,21:26:54.18:870,54,0	0/0:22,0:22:54.18:0,54,1240	1/1:14,11:23:30.07:447,30,0	1/1:7,29:36:81.27:1257,81,0	1/1:6,12:18:21.07:338,21,0	1/1:8,27:35:60.12:923,60,0	0/0:25,0:25:63.21:0,63,1353	0/0:16,0:16:33.11:0,33,706	0/0:24,0:24:54.19:0,54,1228	0/0:27,0:26:60.19:0,60,1235	1/1:6,13:19:27.09:430,27,0	0/0:14,0:14:33.11:0,33,739
chr10	38227799	.	G	GT	10969.89	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-10.805;DP=690;FS=7.484;HRun=10;HaplotypeScore=63.4591;InbreedingCoeff=0.9161;MQ=67.74;MQ0=4;MQRankSum=-0.346;QD=20.39;ReadPosRankSum=2.646;VQSLOD=5.9066;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:68.86:0,69,567	1/1:1,5:6:8.98:84,9,0	0/0:25,0:18:14.75:0,15,224	0/0:24,0:18:25.21:0,25,169	1/1:4,25:30:52.65:700,53,0	1/1:2,23:27:59.82:604,60,0	1/1:7,10:18:2.49:219,2,0	1/1:9,18:27:52.36:538,52,0	1/1:6,20:26:47.34:677,47,0	1/1:12,21:33:65.99:667,66,0	1/1:5,12:19:35.75:338,36,0	0/0:19,0:19:41.78:0,42,331	1/1:1,19:20:20.47:423,20,0	1/1:3,23:26:54.13:569,54,0	1/1:5,25:31:35.23:536,35,0	1/1:4,10:14:5.43:263,5,0	1/1:12,33:46:12.91:668,13,0	1/1:6,22:28:60.10:626,60,0	1/1:7,10:18:32.85:313,33,0	1/1:5,33:38:93.16:964,93,0	1/1:2,15:17:27.07:288,27,0	1/1:5,24:29:44.48:654,44,0	0/0:24,0:24:53.39:0,53,421	0/0:26,1:26:17.35:0,17,465	1/1:6,27:33:60.15:640,60,0	1/1:4,21:25:60.10:622,60,0	1/1:2,14:16:36.09:384,36,0	1/1:3,7:10:18.05:192,18,0
chr10	38228279	.	G	GTGTC	41194.17	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-12.128;DP=947;FS=2.802;HRun=0;HaplotypeScore=141.4491;InbreedingCoeff=0.9994;MQ=70.28;MQ0=2;MQRankSum=-7.038;QD=51.17;ReadPosRankSum=6.356;VQSLOD=5.8104;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,120,1887	1/1:0,13:13:30.10:730,30,0	0/0:45,0:43:74.17:0,74,1298	0/0:51,0:46:84.28:0,84,1584	1/1:5,25:31:63.01:1351,63,0	1/1:7,28:36:69.23:1686,69,0	1/1:2,29:32:63.21:1380,63,0	1/1:13,25:41:90.19:1781,90,0	1/1:4,29:35:75.26:1819,75,0	1/1:6,28:36:87.29:2129,87,0	1/1:3,16:22:42.14:995,42,0	1/1:6,33:40:84.29:2107,84,0	1/1:6,37:44:96.33:2357,96,0	1/1:3,34:43:72.25:1846,72,0	1/1:8,45:53:99:2847,111,0	1/1:5,34:40:81.28:2078,81,0	1/1:2,25:27:54.18:1339,54,0	1/1:3,12:15:27.09:689,27,0	1/1:2,17:19:48.14:1123,48,0	1/1:1,28:29:75.18:1665,75,0	1/1:5,33:38:69.17:1691,69,0	1/1:2,30:34:78.26:1840,78,0	1/1:4,17:23:42.14:1077,42,0	1/1:4,36:40:84.29:2156,84,0	1/1:0,22:23:63.21:1537,63,0	1/1:3,32:36:95.52:2321,96,0	1/1:3,23:28:57.02:1302,57,0	1/1:5,20:25:54.16:1347,54,0
chr10	38228737	.	AGT	A	1574.93	PASS	AB=0.939;AC=25;AF=0.481;AN=52;BaseQRankSum=-0.951;DP=578;FS=3.876;HRun=0;HaplotypeScore=87.9372;InbreedingCoeff=0.5862;MQ=63.77;MQ0=20;MQRankSum=1.392;QD=5.62;ReadPosRankSum=4.246;VQSLOD=2.5479;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:26,1:25:10.50:10,0,167	0/0:10,0:9:5.74:0,6,37	./.	./.	1/1:14,10:23:24.02:248,24,0	0/0:16,0:25:9.92:0,10,75	0/0:25,0:25:8.01:0,8,132	0/0:23,0:22:5.97:0,6,46	1/1:6,6:12:11.90:130,12,0	0/0:26,0:25:41.58:0,42,333	0/0:8,0:17:3.30:0,3,19	1/1:11,0:10:11.99:109,12,0	1/1:8,8:15:15.04:163,15,0	1/1:11,4:15:6.02:65,6,0	1/1:11,11:21:14.25:137,14,0	1/1:10,9:19:11.51:111,12,0	1/1:9,8:18:20.89:210,21,0	0/0:10,0:18:11.94:0,12,106	0/1:22,0:21:11.52:12,0,44	0/1:24,5:28:14.78:15,0,262	0/0:25,0:24:4.24:0,4,172	1/1:5,10:14:15:150,15,0	1/1:13,8:20:8.45:192,8,0	1/1:15,12:27:20.89:210,21,0	0/0:21,0:21:14.60:0,15,177	0/0:17,0:17:17.11:0,17,184	0/0:20,2:21:0.43:0,0,367	0/0:8,0:7:8.99:0,9,77
chr10	38230240	.	AT	A	6491.90	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=10.603;DP=499;FS=3.563;HRun=6;HaplotypeScore=58.7415;InbreedingCoeff=0.9855;MQ=72.44;MQ0=0;MQRankSum=-0.359;QD=27.16;ReadPosRankSum=-0.427;VQSLOD=5.0053;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:75.21:0,75,956	0/0:6,0:6:15.05:0,15,195	0/0:12,0:12:25.29:0,25,286	0/0:11,0:11:12.78:0,13,156	1/1:2,27:29:63.16:676,63,0	0/0:23,0:23:63.20:0,63,816	0/0:19,0:19:57.19:0,57,748	1/1:0,31:31:90.14:924,90,0	1/1:1,14:15:30.07:322,30,0	0/0:28,0:28:78.25:0,78,1022	0/0:20,0:20:60.20:0,60,789	0/0:15,0:15:39.11:0,39,497	1/1:2,16:18:45.04:483,45,0	1/1:0,18:18:48.12:516,48,0	1/1:0,19:19:57.14:613,57,0	1/1:0,12:12:33.08:355,33,0	1/1:1,23:24:66.17:709,66,0	0/0:13,0:13:36.12:0,36,474	1/1:3,14:17:42.10:445,42,0	1/1:2,14:16:39.10:419,39,0	1/1:0,10:10:24.06:258,24,0	1/1:0,3:3:9.02:97,9,0	0/0:10,0:10:30.10:0,30,395	0/0:22,0:22:66.16:0,66,821	0/0:14,0:14:36.12:0,36,474	0/0:24,0:24:66.21:0,66,868	1/1:4,23:27:63.16:677,63,0	0/0:16,0:16:45.11:0,45,574
chr10	38230520	.	CT	C	1917.98	PASS	AB=0.672;AC=25;AF=0.446;AN=56;BaseQRankSum=-5.325;DP=406;FS=7.061;HRun=14;HaplotypeScore=62.5144;InbreedingCoeff=0.7428;MQ=62.33;MQ0=5;MQRankSum=1.366;QD=9.49;ReadPosRankSum=1.102;VQSLOD=2.8680;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:22:59.86:0,60,529	0/0:5,0:9:20.38:0,20,125	0/0:12,0:5:0:0,0,0	0/0:12,0:8:9:0,9,77	0/1:11,16:26:4.60:240,0,5	0/0:11,0:19:37.50:0,37,212	0/0:2,0:8:20.15:0,20,115	1/1:12,19:32:35.27:333,35,0	1/1:2,6:8:14.85:103,15,0	0/0:9,0:22:43.03:0,43,243	0/0:9,0:19:43.17:0,43,244	0/0:12,0:12:21.02:0,21,195	1/1:1,8:10:22.84:149,23,0	1/1:3,1:4:8.89:60,9,0	1/1:5,7:12:13.88:88,14,0	1/1:6,9:15:28.78:191,29,0	1/1:5,8:14:25.81:170,26,0	0/0:2,0:6:14.40:0,14,86	1/1:6,8:14:26.70:182,27,0	0/1:6,14:20:5.17:254,0,5	1/1:7,3:10:5.83:41,6,0	1/1:2,2:5:10.77:60,11,0	0/1:6,2:8:40.67:41,0,73	0/0:7,1:8:20.93:0,21,178	0/0:8,0:20:40.39:0,40,235	0/0:7,0:13:27.47:0,27,175	1/1:9,12:21:10.79:216,11,0	0/0:6,0:18:34.57:0,35,190
chr10	38231958	.	ATTTTG	A	15906.49	PASS	AB=0.722;AC=49;AF=0.875;AN=56;BaseQRankSum=2.431;DP=645;FS=2.236;HRun=0;HaplotypeScore=141.0231;InbreedingCoeff=0.7985;MQ=67.80;MQ0=0;MQRankSum=0.577;QD=28.76;ReadPosRankSum=3.558;VQSLOD=4.8303;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:51.41:0,51,1260	1/1:1,6:7:18.06:331,18,0	0/0:19,0:14:12.51:0,13,281	0/0:43,0:31:34.45:0,34,707	1/1:8,16:25:42.14:733,42,0	1/1:9,17:26:51.17:938,51,0	1/1:10,9:19:18.06:331,18,0	1/1:26,6:32:18.06:331,18,0	1/1:5,12:17:33.11:607,33,0	1/1:14,11:25:33.11:607,33,0	1/1:4,20:24:51.17:938,51,0	1/1:13,0:21:18.05:210,18,0	1/1:9,17:26:48.16:883,48,0	1/1:11,10:21:27.09:496,27,0	1/1:10,24:34:72.25:1324,72,0	1/1:10,13:23:33.11:607,33,0	1/1:11,19:30:11.55:947,12,0	0/1:8,5:13:62.66:258,0,63	1/1:8,7:15:21.03:351,21,0	1/1:5,16:21:45.15:827,45,0	1/1:8,12:20:30.10:552,30,0	1/1:11,15:27:41.27:770,41,0	1/1:6,0:21:36.11:419,36,0	1/1:12,0:20:11.83:139,12,0	1/1:8,12:20:36.12:662,36,0	1/1:6,26:32:78.27:1434,78,0	1/1:6,14:20:39.13:717,39,0	1/1:4,10:14:27.09:496,27,0
chr10	38232192	.	AT	A	7240.22	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-6.139;DP=617;FS=5.957;HRun=9;HaplotypeScore=73.3382;InbreedingCoeff=0.9819;MQ=74.90;MQ0=0;MQRankSum=-1.796;QD=22.35;ReadPosRankSum=0.281;VQSLOD=5.5950;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:33:88.81:0,89,959	0/0:1,0:12:31.58:0,32,193	0/0:16,0:16:36:0,36,356	0/0:17,0:17:6.87:0,7,276	1/1:1,26:27:78.04:714,78,0	0/0:2,0:21:48.29:0,48,245	0/0:1,0:15:36.96:0,37,188	1/1:8,29:37:87:786,87,0	1/1:3,15:18:45.02:412,45,0	0/0:4,0:31:76.96:0,77,403	0/0:0,0:17:48.67:0,49,268	0/0:16,0:16:48.14:0,48,554	1/1:4,17:21:28.29:417,28,0	1/1:1,17:18:45.02:412,45,0	1/1:4,22:26:51.02:467,51,0	1/1:3,21:24:57.02:522,57,0	1/1:5,20:25:54.02:494,54,0	0/0:0,0:11:28.53:0,29,147	1/1:5,19:24:57.02:522,57,0	1/1:3,26:29:78.03:710,78,0	1/1:2,12:14:33.02:302,33,0	1/1:3,22:25:63.02:577,63,0	0/0:28,0:28:81.23:0,81,924	0/0:17,1:18:20.68:0,21,492	0/0:4,0:21:39.77:0,40,202	0/0:5,0:31:74.08:0,74,385	1/1:3,33:36:99:906,99,0	0/0:0,0:6:11.36:0,11,58
chr10	38237112	.	CG	C	6196.43	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=18.013;DP=659;FS=2.314;HRun=3;HaplotypeScore=93.3142;InbreedingCoeff=0.9808;MQ=61.06;MQ0=0;MQRankSum=-0.517;QD=33.86;ReadPosRankSum=2.376;VQSLOD=5.2672;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,135,1904	1/1:0,10:10:30.09:372,30,0	0/0:6,0:4:5.99:0,6,53	0/0:12,0:9:14.65:0,15,133	0/0:25,0:25:75.24:0,75,1059	1/1:1,18:19:51.16:632,51,0	1/1:2,21:23:63.20:781,63,0	0/0:23,0:22:54.14:0,54,710	0/0:16,0:16:45.15:0,45,647	1/1:1,26:27:78.25:966,78,0	1/1:0,27:27:72.23:892,72,0	0/0:43,0:43:99:0,123,1736	0/0:26,0:26:72.23:0,72,1019	0/0:31,0:31:93.27:0,93,1282	0/0:23,0:23:66.22:0,66,950	0/0:29,0:29:84.28:0,84,1208	0/0:23,0:23:69.23:0,69,993	1/1:0,21:21:60.19:744,60,0	0/0:17,0:16:48.16:0,48,691	0/0:20,0:20:51.17:0,51,733	0/0:40,0:40:99:0,111,1541	0/0:26,0:26:69.23:0,69,991	0/0:20,0:20:57.18:0,57,801	0/0:25,0:25:72.21:0,72,1013	1/1:1,24:25:57.18:706,57,0	1/1:2,19:21:60.18:732,60,0	0/0:26,0:26:78.26:0,78,1119	1/1:0,10:10:30.09:372,30,0
chr10	38237492	.	CTTT	C	9711.84	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-13.027;DP=603;FS=7.736;HRun=11;HaplotypeScore=108.2430;InbreedingCoeff=0.9942;MQ=68.16;MQ0=0;MQRankSum=-4.563;QD=30.73;ReadPosRankSum=3.030;VQSLOD=3.8257;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:57.19:0,57,1121	0/0:1,0:5:15.05:0,15,233	0/0:11,0:11:21.07:0,21,417	0/0:6,0:7:14.96:0,15,153	1/1:1,36:37:96.24:1234,96,0	0/0:3,0:22:57.18:0,57,802	0/0:5,0:15:30.09:0,30,415	1/1:8,31:40:93.23:1192,93,0	1/1:4,19:23:54.16:703,54,0	0/0:4,0:38:99:0,105,1556	0/0:3,0:16:42.14:0,42,604	0/0:2,0:19:48.15:0,48,672	1/1:4,18:22:48.14:628,48,0	1/1:5,15:20:42.11:546,42,0	1/1:3,22:25:66.19:858,66,0	1/1:2,22:24:63.19:825,63,0	1/1:4,15:19:45.13:591,45,0	0/0:2,0:17:45.15:0,45,647	1/1:4,17:21:51.13:669,51,0	1/1:3,16:19:42.11:545,42,0	1/1:2,8:10:21.05:276,21,0	1/1:3,20:23:48.10:628,48,0	0/0:4,0:18:36.12:0,36,535	0/0:5,0:18:39.12:0,39,553	0/0:2,0:28:65.25:0,65,905	0/0:11,0:36:90.28:0,90,1315	1/1:4,29:33:78.23:1016,78,0	0/0:4,0:12:27.05:0,27,333
chr10	38238290	.	T	TA	1785.14	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=7.998;DP=541;FS=2.619;HRun=4;HaplotypeScore=53.0497;InbreedingCoeff=0.9909;MQ=83.00;MQ0=0;MQRankSum=-2.249;QD=35.00;ReadPosRankSum=2.898;VQSLOD=4.1689;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:51.12:0,51,566	0/0:9,0:9:24.07:0,24,272	0/0:13,0:13:32.62:0,33,326	0/0:20,0:20:47.15:0,47,569	0/0:30,0:30:84.21:0,84,933	0/0:17,0:17:42.12:0,42,476	0/0:12,0:12:36.10:0,36,408	0/0:32,0:32:84.22:0,84,937	0/0:13,0:13:39.11:0,39,442	0/0:29,0:29:81.23:0,81,919	0/0:32,0:32:87.25:0,87,987	1/1:1,14:15:42.14:575,42,0	0/0:14,0:14:42.10:0,42,466	0/0:18,0:18:51.14:0,51,579	0/0:17,0:17:51.15:0,51,579	0/0:11,0:11:30.09:0,30,340	0/0:21,0:21:60.17:0,60,680	0/0:12,0:12:30.09:0,30,340	0/0:25,0:25:69.19:0,69,775	0/0:45,0:45:99:0,126,1420	0/0:5,0:5:15.04:0,15,170	0/0:21,0:21:54.14:0,54,603	1/1:2,25:27:75.25:1026,75,0	1/1:2,7:9:24.08:327,24,0	0/0:16,0:16:48.13:0,48,536	0/0:28,0:28:78.21:0,78,876	0/0:23,0:23:69.18:0,69,772	0/0:9,0:9:21.06:0,21,238
chr10	38238385	.	A	AC	1517.83	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=3.488;DP=546;FS=0.584;HRun=6;HaplotypeScore=58.6000;InbreedingCoeff=0.9993;MQ=85.78;MQ0=0;MQRankSum=-3.446;QD=30.36;ReadPosRankSum=0.232;VQSLOD=4.0936;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:45.06:0,45,448	0/0:12,0:12:33.04:0,33,327	0/0:30,0:30:74.99:0,75,725	0/0:19,0:19:35.98:0,36,331	0/0:25,0:25:66.14:0,66,667	0/0:35,0:35:99:0,102,1027	0/0:14,0:14:42.10:0,42,428	0/0:29,0:29:72.14:0,72,728	0/0:17,0:17:51.12:0,51,520	0/0:22,0:22:57.12:0,57,580	0/0:16,0:16:42.09:0,42,428	1/1:0,19:19:54.17:679,54,0	0/0:20,0:20:48.10:0,48,489	0/0:14,0:14:39.09:0,39,397	0/0:17,0:17:42.09:0,42,428	0/0:16,0:16:39.09:0,39,397	0/0:23,0:23:66.15:0,66,673	0/0:14,0:14:39.09:0,39,398	0/0:17,0:17:48.11:0,48,490	0/0:23,0:23:66.12:0,66,659	0/0:17,0:17:51.09:0,51,511	0/0:13,0:13:39.08:0,39,391	1/1:0,20:20:51.16:642,51,0	1/1:2,9:11:27.09:340,27,0	0/0:13,0:13:36.08:0,36,365	0/0:19,0:19:54.12:0,54,546	0/0:34,0:34:96.22:0,96,979	0/0:19,0:19:57.02:0,57,546
chr10	38239777	.	G	GA	6751.92	PASS	AB=1.000;AC=27;AF=0.482;AN=56;BaseQRankSum=-11.844;DP=596;FS=1.921;HRun=10;HaplotypeScore=65.4743;InbreedingCoeff=0.9215;MQ=73.43;MQ0=0;MQRankSum=-1.095;QD=22.36;ReadPosRankSum=0.540;VQSLOD=5.7348;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:34:79.92:0,80,646	0/0:10,0:12:25.03:0,25,184	0/0:16,0:17:21.52:0,22,152	0/1:8,0:8:25.16:35,0,25	1/1:4,20:24:57.02:571,57,0	0/0:19,0:21:55:0,55,430	0/0:13,0:13:32.94:0,33,268	1/1:9,17:26:26.48:479,26,0	1/1:1,24:25:63.16:672,63,0	0/0:27,0:28:47.88:0,48,461	0/0:15,0:15:44.95:0,45,369	0/0:23,0:23:50.92:0,51,419	1/1:1,17:18:39.10:416,39,0	1/1:1,17:18:45.11:480,45,0	1/1:3,17:20:45.11:480,45,0	1/1:2,17:19:42.11:448,42,0	1/1:6,12:19:20.13:387,20,0	0/0:18,1:19:13.07:0,13,313	1/1:7,11:18:32.92:334,33,0	1/1:5,27:33:40.73:816,41,0	1/1:2,9:11:15.04:160,15,0	1/1:2,19:21:51.09:532,51,0	0/0:28,0:28:68.87:0,69,564	0/0:26,0:26:65.88:0,66,536	0/0:18,0:18:38.92:0,39,320	0/0:27,0:27:62.88:0,63,512	1/1:6,36:42:50.01:942,50,0	0/0:12,0:12:35.96:0,36,295
chr10	38240506	.	ATT	A	1067.82	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.866;DP=526;FS=0.660;HRun=8;HaplotypeScore=66.1536;InbreedingCoeff=0.9625;MQ=70.00;MQ0=0;MQRankSum=-2.688;QD=22.25;ReadPosRankSum=0.393;VQSLOD=2.3817;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:75.24:0,75,1242	0/0:7,0:7:21.07:0,21,348	0/0:13,0:12:12.59:0,13,279	0/0:9,0:8:18.50:0,18,220	0/0:38,0:38:99:0,108,1786	0/0:19,0:19:57.19:0,57,934	0/0:20,0:20:51.12:0,51,757	0/0:24,0:24:62.95:0,63,1000	0/0:11,0:11:30.10:0,30,504	0/0:29,0:29:75.25:0,75,1239	0/0:24,0:24:69.20:0,69,1057	1/1:2,11:13:24.07:293,24,0	0/0:27,0:27:81.28:0,81,1365	0/0:12,0:12:27.09:0,27,443	0/0:12,0:12:33.11:0,33,553	0/0:18,0:18:54.18:0,54,905	0/0:23,0:23:63.22:0,63,1045	0/0:13,0:13:36.12:0,36,595	0/0:23,0:23:63.20:0,63,1028	0/0:21,0:22:60.18:0,60,937	0/0:8,0:8:24.08:0,24,399	0/0:4,0:4:12.04:0,12,201	1/1:3,24:27:63.19:768,63,0	1/1:2,6:8:12.04:146,12,0	0/0:17,0:17:42.13:0,42,663	0/0:24,0:24:72.24:0,72,1195	0/0:36,0:37:99:0,108,1773	0/0:16,0:16:39.11:0,39,632
chr10	38240664	.	TTTAC	T	1957.63	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.951;DP=579;FS=0.000;HRun=0;HaplotypeScore=96.1212;InbreedingCoeff=0.9878;MQ=88.42;MQ0=0;MQRankSum=-4.031;QD=42.56;ReadPosRankSum=0.700;VQSLOD=3.7972;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:81.23:0,81,1990	0/0:14,0:14:36.12:0,36,960	0/0:18,0:17:17.23:0,17,880	0/0:26,0:26:64.74:0,65,1481	0/0:25,0:25:72.23:0,72,1828	0/0:20,0:20:60.21:0,60,1599	0/0:20,0:20:57.20:0,57,1505	0/0:27,0:27:78.26:0,78,2026	0/0:20,0:20:54.19:0,54,1426	0/0:24,0:24:66.22:0,66,1671	0/0:17,0:17:51.18:0,51,1359	1/1:1,18:19:45.09:798,45,0	0/0:28,0:28:84.27:0,84,2082	0/0:18,0:18:54.19:0,54,1393	0/0:22,0:22:63.20:0,63,1596	0/0:24,0:24:72.25:0,72,1868	0/0:24,0:24:72.23:0,72,1830	0/0:6,0:6:18.06:0,18,480	0/0:20,0:20:57.18:0,57,1465	0/0:22,0:22:60.19:0,60,1544	0/0:32,0:32:96.32:0,96,2506	0/0:13,0:13:36.12:0,36,921	1/1:1,11:12:30.02:519,30,0	1/1:1,14:15:42.14:783,42,0	0/0:18,0:18:54.18:0,54,1387	0/0:26,0:26:78.25:0,78,1973	0/0:37,0:37:99:0,111,2935	0/0:5,0:5:15.05:0,15,400
chr10	38240782	.	G	GGAACAAGCTAAAAGCGCTCACTCTGGC	10288.86	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=3.919;DP=597;FS=2.082;HRun=0;HaplotypeScore=384.9369;InbreedingCoeff=0.9820;MQ=78.69;MQ0=1;MQRankSum=-10.384;QD=194.13;ReadPosRankSum=1.021;VQSLOD=3.8893;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:75.24:0,75,3881	0/0:4,0:4:12.04:0,12,867	0/0:15,0:15:41.48:0,41,1516	0/0:18,0:17:34.52:0,35,1484	0/0:31,0:30:87.30:0,87,5456	0/0:28,0:28:84.27:0,84,4664	0/0:16,0:16:48.16:0,48,2830	0/0:27,0:27:75.25:0,75,3981	0/0:25,0:25:72.25:0,72,4161	0/0:27,0:27:75.24:0,75,4549	0/0:15,0:15:45.15:0,45,2693	1/1:14,6:24:60.21:5596,60,0	0/0:24,0:24:69.22:0,69,4372	0/0:21,0:21:63.22:0,63,3854	0/0:35,0:35:99:0,105,6611	0/0:18,0:18:54.17:0,54,2827	0/0:20,0:20:54.19:0,54,3739	0/0:19,0:19:57.20:0,57,2617	0/0:18,0:18:54.19:0,54,2807	0/0:26,0:26:78.27:0,78,4988	0/0:26,0:26:75.24:0,75,4456	0/0:20,0:20:57.20:0,57,3813	1/1:12,2:14:39.13:3514,39,0	1/1:10,0:14:21.06:1179,21,0	0/0:14,0:14:42.14:0,42,2519	0/0:34,0:34:99:0,102,6051	0/0:31,0:31:93.32:0,93,6397	0/0:5,0:5:15.05:0,15,1059
chr10	38244718	.	TG	T	449.92	PASS	AB=0.763;AC=4;AF=0.071;AN=56;BaseQRankSum=6.871;DP=563;FS=9.716;HRun=1;HaplotypeScore=57.5297;InbreedingCoeff=0.5344;MQ=50.25;MQ0=83;MQRankSum=-3.119;QD=9.18;ReadPosRankSum=-3.233;VQSLOD=-0.7357;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:43:99:0,111,1702	0/0:9,0:7:12.04:0,12,192	0/0:19,0:3:9.03:0,9,132	0/0:18,0:1:3.01:0,3,31	0/0:25,0:19:45.15:0,45,719	0/0:20,0:17:36.12:0,36,573	0/0:20,0:17:42.14:0,42,671	0/0:22,0:19:57.19:0,57,904	0/0:18,0:18:54.17:0,54,840	0/0:20,0:13:36.12:0,36,575	0/0:14,0:12:27.09:0,27,432	0/1:12,9:18:99:332,0,242	0/0:18,0:16:48.16:0,48,767	0/0:23,0:21:60.20:0,60,950	0/0:21,0:19:57.19:0,57,911	0/0:16,0:16:45.15:0,45,720	0/0:32,0:32:96.33:0,96,1535	0/0:25,0:25:72.25:0,72,1145	0/0:21,0:14:42.14:0,42,671	0/0:19,0:11:18.06:0,18,288	0/0:31,0:31:75.02:0,75,1196	0/0:19,0:13:24.07:0,24,360	0/1:15,4:11:0.35:44,0,0	1/1:2,7:9:13.68:185,14,0	0/0:11,0:7:15.05:0,15,239	0/0:16,0:11:33.11:0,33,528	0/0:22,0:20:54.18:0,54,858	0/0:9,0:9:27.09:0,27,432
chr10	38244814	.	TC	T	1675.93	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=11.224;DP=651;FS=0.000;HRun=3;HaplotypeScore=79.0803;InbreedingCoeff=0.9984;MQ=90.90;MQ0=0;MQRankSum=-5.715;QD=27.03;ReadPosRankSum=0.228;VQSLOD=2.6472;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:62,0:62:99:0,175,2467	0/0:16,0:16:45.15:0,45,647	0/0:23,0:23:63.21:0,63,883	0/0:32,1:33:70.17:0,70,1129	0/0:23,0:23:69.22:0,69,975	0/0:16,0:16:48.13:0,48,654	0/0:25,0:25:66.21:0,66,930	0/0:19,0:19:54.18:0,54,778	0/0:13,0:13:36.12:0,36,518	0/0:31,0:31:90.30:0,90,1295	0/0:19,0:19:45.15:0,45,644	1/1:1,23:23:57.18:706,57,0	0/0:20,0:20:60.20:0,60,863	0/0:19,0:19:54.16:0,54,758	0/0:25,0:25:72.24:0,72,1032	0/0:22,0:22:66.21:0,66,933	0/0:32,0:32:93.31:0,93,1338	0/0:13,0:13:36.12:0,36,518	0/0:22,0:22:60.15:0,60,795	0/0:27,0:27:60.19:0,60,842	0/0:43,0:43:99:0,126,1771	0/0:25,0:25:66.19:0,66,911	1/1:0,11:11:24.08:297,24,0	1/1:1,26:27:66.21:815,66,0	0/0:15,0:15:39.09:0,39,538	0/0:20,0:20:60.17:0,60,823	0/0:17,0:17:51.16:0,51,717	0/0:9,0:9:24.08:0,24,346
chr10	38245216	.	C	CA	2571.77	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-2.197;DP=594;FS=5.641;HRun=1;HaplotypeScore=59.4835;InbreedingCoeff=0.9991;MQ=85.06;MQ0=0;MQRankSum=-2.704;QD=40.18;ReadPosRankSum=3.161;VQSLOD=4.3335;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:81.27:0,81,1125	0/0:13,0:13:39.10:0,39,523	0/0:19,0:19:51.06:0,51,605	0/0:18,0:18:38.10:0,38,462	0/0:30,0:31:90.23:0,90,1211	0/0:23,0:23:69.22:0,69,939	0/0:12,0:12:33.11:0,33,460	0/0:30,0:30:90.24:0,90,1179	0/0:17,0:17:51.14:0,51,675	0/0:25,0:25:72.22:0,72,935	0/0:22,0:22:66.20:0,66,873	1/1:0,18:18:51.17:809,51,0	0/0:25,0:25:75.23:0,75,1006	0/0:20,0:20:60.20:0,60,835	0/0:24,0:24:69.21:0,69,930	0/0:18,0:18:54.16:0,54,719	0/0:21,0:21:51.15:0,51,676	0/0:14,0:14:42.13:0,42,568	0/0:22,0:22:63.10:0,63,811	0/0:25,0:25:72.19:0,72,923	0/0:32,0:34:88.02:0,88,1239	0/0:10,0:10:24.07:0,24,305	1/1:0,20:20:51.17:809,51,0	1/1:0,26:26:69.24:1096,69,0	0/0:16,0:16:42.09:0,42,505	0/0:28,0:28:84.26:0,84,1130	0/0:22,0:22:66.22:0,66,916	0/0:14,0:14:42.08:0,42,543
chr10	38245402	.	A	AAT	1058.53	PASS	AB=0.714;AC=3;AF=0.054;AN=56;BaseQRankSum=-5.894;DP=596;FS=0.785;HRun=0;HaplotypeScore=80.3200;InbreedingCoeff=0.5632;MQ=61.83;MQ0=1;MQRankSum=-1.126;QD=35.28;ReadPosRankSum=0.712;VQSLOD=5.5574;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,99,1273	0/0:13,0:13:33.08:0,33,412	0/0:4,0:2:3.48:0,3,39	0/0:8,0:5:11.76:0,12,107	0/0:37,0:37:99:0,105,1353	1/1:2,23:25:63.22:1071,63,0	0/1:3,2:5:30:93,0,30	0/0:41,0:41:99:0,108,1379	0/0:10,0:10:24.08:0,24,312	0/0:23,0:23:69.22:0,69,886	0/0:35,0:35:90.26:0,90,1119	0/0:22,0:22:54.16:0,54,688	0/0:28,0:28:75.24:0,75,973	0/0:20,0:20:57.19:0,57,740	0/0:20,0:20:48.16:0,48,624	0/0:21,0:21:60.18:0,60,766	0/0:23,0:23:60.20:0,60,780	0/0:10,0:10:22.31:0,22,309	0/0:22,0:22:54.12:0,54,671	0/0:24,0:24:69.20:0,69,869	0/0:15,0:15:39.11:0,39,492	0/0:11,0:11:24.08:0,24,312	0/0:28,0:28:72.17:0,72,888	0/0:18,0:18:45.14:0,45,573	0/0:30,0:30:81.26:0,81,1054	0/0:24,0:24:66.21:0,66,858	0/0:34,0:34:84.25:0,84,1066	0/0:7,0:7:21.07:0,21,273
chr10	38245796	.	AGTGTGT	A	4809.22	PASS	AB=0.805;AC=47;AF=0.940;AN=50;BaseQRankSum=5.050;DP=491;FS=0.000;HRun=0;HaplotypeScore=118.0606;InbreedingCoeff=0.2658;MQ=66.36;MQ0=9;MQRankSum=-5.302;QD=12.62;ReadPosRankSum=0.869;VQSLOD=3.6250;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:45.13:0,45,1149	1/1:2,0:3:3.01:42,3,0	./.	./.	1/1:13,8:22:21.54:409,22,0	1/1:11,0:11:3.01:31,3,0	1/1:16,0:16:6.02:84,6,0	./.	1/1:13,9:25:27.09:511,27,0	1/1:5,0:8:6.02:84,6,0	1/1:3,0:6:7.84:89,8,0	1/1:11,1:16:21.07:312,21,0	1/1:10,6:15:8.91:164,9,0	1/1:6,6:12:9.03:183,9,0	1/1:12,5:18:24.54:409,25,0	1/1:4,11:17:27.09:511,27,0	0/1:25,2:33:0.34:265,0,0	1/1:10,0:10:5.97:61,6,0	1/1:16,2:17:5.99:103,6,0	1/1:11,7:19:15.05:263,15,0	1/1:23,8:31:3.01:61,3,0	1/1:4,10:17:15.05:267,15,0	1/1:11,0:12:6:63,6,0	1/1:15,0:22:12.04:168,12,0	1/1:3,0:4:3.01:42,3,0	1/1:12,0:17:18.52:237,19,0	1/1:9,8:18:20.91:408,21,0	1/1:3,0:4:3.01:42,3,0
chr10	38247185	.	GGA	G	1815.77	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.584;DP=642;FS=5.472;HRun=0;HaplotypeScore=79.9515;InbreedingCoeff=0.9985;MQ=79.59;MQ0=1;MQRankSum=-1.788;QD=32.42;ReadPosRankSum=0.707;VQSLOD=5.1987;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,114,1916	0/0:12,0:12:36.09:0,36,565	0/0:22,0:22:56.21:0,56,802	0/0:21,0:20:38.79:0,39,612	0/0:35,0:35:99:0,105,1853	0/0:25,0:25:72.24:0,72,1294	0/0:16,0:16:48.12:0,48,763	0/0:24,0:24:72.22:0,72,1179	0/0:29,0:29:81.24:0,81,1397	0/0:31,0:31:87.28:0,87,1504	0/0:13,0:13:39.12:0,39,672	1/1:6,19:25:75.19:1042,75,0	0/0:26,0:26:75.20:0,75,1296	0/0:29,0:29:87.28:0,87,1529	0/0:22,0:22:66.20:0,66,1123	0/0:25,0:25:75.22:0,75,1262	0/0:34,0:34:99:0,99,1759	0/0:13,0:13:36.12:0,36,647	0/0:16,0:16:45.15:0,45,780	0/0:21,0:21:60.21:0,60,1067	0/0:32,0:32:93.27:0,93,1605	0/0:26,0:26:75.23:0,75,1304	1/1:1,10:11:24.08:366,24,0	1/1:1,19:19:36.12:551,36,0	0/0:10,0:10:30.10:0,30,539	0/0:29,0:29:86.85:0,87,1425	0/0:27,0:27:81.24:0,81,1361	0/0:9,0:9:27.09:0,27,485
chr10	38247186	.	GA	G	728.40	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=10.873;DP=635;FS=1.850;HRun=1;HaplotypeScore=69.7513;InbreedingCoeff=0.9985;MQ=78.57;MQ0=1;MQRankSum=-0.576;QD=13.01;ReadPosRankSum=0.017;VQSLOD=2.2890;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,113,1518	0/0:12,0:12:36.09:0,36,474	0/0:20,1:21:38.46:0,38,607	0/0:19,1:19:35.24:0,35,453	0/0:36,0:36:99:0,108,1506	0/0:24,0:24:72.24:0,72,1029	0/0:16,0:16:48.12:0,48,630	0/0:24,0:24:72.21:0,72,954	0/0:27,0:27:81.24:0,81,1121	0/0:29,0:29:87.28:0,87,1207	0/0:14,0:14:39.11:0,39,539	1/1:24,1:25:73.73:493,74,0	0/0:25,0:25:75.18:0,75,1022	0/0:29,0:29:87.27:0,87,1216	0/0:22,0:22:66.19:0,66,905	0/0:26,0:26:78.21:0,78,1044	0/0:33,0:33:99:0,99,1394	0/0:12,0:12:36.12:0,36,515	0/0:15,0:15:45.14:0,45,605	0/0:21,0:21:60.20:0,60,847	0/0:32,0:32:93.26:0,93,1288	0/0:26,0:26:75.21:0,75,1031	1/1:10,1:11:23.63:156,24,0	1/1:20,0:18:35.32:222,35,0	0/0:11,0:11:33.10:0,33,455	0/0:29,0:29:86.85:0,87,1158	0/0:27,0:27:80.89:0,81,1065	0/0:9,0:9:27.09:0,27,385
chr10	38247456	.	CA	C	6857.34	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=7.738;DP=634;FS=1.384;HRun=9;HaplotypeScore=69.7108;InbreedingCoeff=0.9996;MQ=81.24;MQ0=0;MQRankSum=-1.836;QD=22.34;ReadPosRankSum=1.030;VQSLOD=5.7368;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:84.24:0,84,961	0/0:19,0:19:51.13:0,51,576	0/0:19,0:17:35.88:0,36,366	0/0:21,0:20:26.27:0,26,304	1/1:2,33:35:86.96:786,87,0	0/0:25,0:25:72.20:0,72,823	0/0:19,0:19:54.10:0,54,597	1/1:4,20:24:59.97:531,60,0	1/1:2,16:18:45.02:412,45,0	0/0:28,1:29:47.75:0,48,804	0/0:20,0:20:54.16:0,54,623	0/0:23,0:23:60.18:0,60,692	1/1:3,18:21:54.03:494,54,0	1/1:6,15:21:48.02:439,48,0	1/1:3,18:21:48.02:439,48,0	1/1:3,12:15:27.01:247,27,0	1/1:3,34:37:93.05:851,93,0	0/0:18,0:18:51.15:0,51,588	1/1:0,22:22:66.04:604,66,0	1/1:2,20:22:59.95:538,60,0	1/1:1,12:14:29.04:253,29,0	1/1:1,20:21:60.03:549,60,0	0/0:19,0:19:51.11:0,51,572	0/0:19,0:19:48.10:0,48,539	0/0:19,0:19:51.12:0,51,568	0/0:31,0:31:78.23:0,78,900	1/1:4,32:36:78.03:714,78,0	0/0:17,0:17:39.12:0,39,450
chr10	38247731	.	GTTT	G	1624.63	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=10.017;DP=764;FS=3.556;HRun=11;HaplotypeScore=124.7296;InbreedingCoeff=0.9996;MQ=63.54;MQ0=1;MQRankSum=-1.351;QD=26.20;ReadPosRankSum=1.912;VQSLOD=2.4885;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:44:99:0,120,2175	0/0:9,0:9:27.07:0,27,498	0/0:30,0:21:48.89:0,49,705	0/0:24,0:21:47.19:0,47,588	0/0:26,0:28:66.17:0,66,1173	0/0:27,0:30:69.16:0,69,1214	0/0:25,0:27:72.15:0,72,1322	0/0:28,0:28:66.21:0,66,1254	0/0:32,0:33:84.16:0,84,1556	0/0:28,0:29:66.21:0,66,1242	0/0:29,0:29:80.93:0,81,1511	1/1:2,17:19:45.13:586,45,0	0/0:26,0:26:65.24:0,65,1200	0/0:37,0:37:99:0,101,1860	0/0:31,0:31:84.26:0,84,1575	0/0:33,0:32:96.30:0,96,1860	0/0:29,0:29:81.28:0,81,1636	0/0:24,0:24:64.98:0,65,1189	0/0:28,0:28:75.22:0,75,1362	0/0:26,0:26:59.71:0,60,1178	0/0:31,0:34:84.12:0,84,1373	0/0:20,0:22:57.15:0,57,1004	1/1:1,20:21:42.02:551,42,0	1/1:1,21:22:48.14:631,48,0	0/0:18,0:20:49.39:0,49,918	0/0:32,0:33:93.28:0,93,1736	0/0:30,0:31:93.30:0,93,1754	0/0:13,0:14:36.12:0,36,710
chr10	38247920	.	T	TA	1871.83	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=0.913;DP=618;FS=0.000;HRun=7;HaplotypeScore=87.4278;InbreedingCoeff=0.9955;MQ=76.14;MQ0=0;MQRankSum=-1.370;QD=30.19;ReadPosRankSum=1.745;VQSLOD=3.5581;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,117,1124	0/0:9,0:9:18.03:0,18,174	0/0:17,0:17:36.05:0,36,406	0/0:9,0:9:20.94:0,21,185	0/0:23,0:23:57.08:0,57,546	0/0:20,0:20:54.08:0,54,521	0/0:20,0:20:57.09:0,57,550	0/0:26,0:26:66:0,66,620	0/0:24,0:24:63.10:0,63,604	0/0:26,0:26:60.09:0,60,579	0/0:15,0:15:42.07:0,42,405	1/1:0,26:26:72.22:864,72,0	0/0:20,0:20:50.89:0,51,449	0/0:25,0:25:59.90:0,60,540	0/0:19,0:19:51:0,51,477	0/0:28,0:28:72.11:0,72,690	0/0:30,0:30:87.11:0,87,826	0/0:21,0:21:57.05:0,57,542	0/0:22,0:22:54.08:0,54,518	0/0:23,0:23:57.08:0,57,546	0/0:13,0:13:39.05:0,39,368	0/0:21,0:21:60.03:0,60,559	1/1:1,15:16:42.13:502,42,0	1/1:2,18:20:54.17:649,54,0	0/0:15,0:15:45.07:0,45,434	0/0:31,0:31:81.12:0,81,782	0/0:29,0:29:75.04:0,75,702	0/0:26,0:25:75.12:0,75,724
chr10	38248682	.	C	CTTT	4061.32	PASS	AB=0.610;AC=42;AF=0.750;AN=56;BaseQRankSum=3.986;DP=614;FS=2.105;HRun=12;HaplotypeScore=109.1570;InbreedingCoeff=0.1912;MQ=72.75;MQ0=0;MQRankSum=-2.830;QD=7.41;ReadPosRankSum=0.593;VQSLOD=0.4205;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:36:46.96:0,47,751	1/1:2,0:14:12.71:47,13,0	0/0:20,0:19:9.18:0,9,180	0/0:9,0:9:3.33:0,3,38	1/1:8,1:22:38.49:309,38,0	0/1:7,0:22:10.20:40,0,10	0/1:4,0:27:32.87:61,0,33	1/1:9,1:35:72.88:599,73,0	1/1:3,1:20:18.70:155,19,0	0/1:11,0:21:41.31:41,0,67	1/1:4,0:28:31.87:141,32,0	1/1:5,0:24:17.50:61,17,0	1/1:10,11:26:6:78,6,0	1/1:14,1:23:45.61:374,46,0	1/1:4,1:22:31.07:223,31,0	1/1:1,1:16:17.46:152,17,0	1/1:4,0:20:23.43:170,23,0	0/1:4,0:16:20.18:26,0,20	1/1:5,0:20:41.75:313,42,0	1/1:4,0:14:29.62:202,30,0	1/1:4,2:20:26.92:264,27,0	1/1:8,1:25:37.07:302,37,0	0/1:14,0:20:70.99:110,0,71	0/1:5,1:30:0.47:115,0,0	0/1:9,0:21:16.17:66,0,16	0/1:3,0:18:16.17:89,0,16	1/1:10,0:24:13.16:90,13,0	1/1:8,0:20:10.42:34,10,0
chr10	38249017	.	A	AG	5003.51	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=15.273;DP=546;FS=6.250;HRun=1;HaplotypeScore=100.3220;InbreedingCoeff=0.9788;MQ=88.76;MQ0=0;MQRankSum=-5.046;QD=20.34;ReadPosRankSum=4.098;VQSLOD=5.0458;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:66.22:0,66,918	0/0:9,0:9:27.09:0,27,374	0/0:28,0:28:49.71:0,50,874	0/0:22,0:21:40.20:0,40,597	1/1:2,9:11:24.04:248,24,0	0/0:23,0:23:66.22:0,66,919	0/0:29,0:29:87.28:0,87,1192	1/1:7,10:17:33.32:333,33,0	1/1:3,17:20:49.86:518,50,0	0/0:20,0:20:54.17:0,54,733	0/0:15,0:15:39.12:0,39,541	0/0:28,0:28:62.93:0,63,369	1/1:3,14:17:22.15:338,22,0	1/1:3,16:19:31.02:469,31,0	1/1:2,24:26:50.65:516,51,0	1/1:4,19:23:42.44:600,42,0	1/1:0,20:20:45.10:469,45,0	0/0:13,0:13:39.09:0,39,523	1/1:4,5:9:19.09:176,19,0	1/1:7,7:14:20.34:189,20,0	1/1:6,19:25:11.65:253,12,0	1/1:2,12:14:6.17:229,6,0	0/0:19,0:19:43.55:0,44,269	0/0:24,0:24:44.86:0,45,287	0/0:13,0:13:39.13:0,39,544	0/0:22,0:22:66.22:0,66,922	1/1:6,25:31:35.45:666,35,0	0/0:13,0:13:39.13:0,39,545
chr10	38249139	.	T	TGG	20007.15	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-15.610;DP=743;FS=0.272;HRun=0;HaplotypeScore=84.2785;InbreedingCoeff=0.9994;MQ=84.67;MQ0=2;MQRankSum=-5.379;QD=53.07;ReadPosRankSum=0.809;VQSLOD=5.1570;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:90.27:0,90,1410	0/0:13,0:13:36.12:0,36,583	0/0:23,0:23:51.93:0,52,910	0/0:30,0:30:84.23:0,84,1270	1/1:1,21:22:57.19:1125,57,0	0/0:18,0:18:54.17:0,54,856	0/0:21,0:21:60.20:0,60,975	1/1:3,23:27:78.25:1519,78,0	1/1:2,24:26:63.22:1279,63,0	0/0:24,0:24:72.24:0,72,1151	0/0:21,0:21:60.20:0,60,976	0/0:26,0:26:78.27:0,78,1270	1/1:0,22:23:57.20:1153,57,0	1/1:0,30:31:87.30:1768,87,0	1/1:0,29:30:78.27:1585,78,0	1/1:0,20:21:54.19:1098,54,0	1/1:0,26:26:69.24:1402,69,0	0/0:34,0:34:99:0,102,1648	1/1:2,24:27:78.27:1549,78,0	1/1:0,22:22:54.18:1072,54,0	1/1:1,37:40:96.33:1951,96,0	1/1:0,36:38:99:2043,102,0	0/0:27,0:27:81.28:0,81,1317	0/0:37,0:37:99:0,105,1659	0/0:26,0:26:78.27:0,78,1266	0/0:28,0:28:81.27:0,81,1298	1/1:2,40:41:99:2464,126,0	0/0:7,0:7:21.07:0,21,343
chr10	38249456	.	CA	C	4827.45	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=17.835;DP=544;FS=0.000;HRun=1;HaplotypeScore=162.8670;InbreedingCoeff=0.9981;MQ=85.64;MQ0=1;MQRankSum=-16.424;QD=25.68;ReadPosRankSum=2.246;VQSLOD=4.7190;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,132,2098	0/0:10,0:10:27.09:0,27,431	0/0:24,0:24:62.39:0,62,1011	0/0:18,0:18:54.17:0,54,811	1/1:1,13:14:36.03:339,36,0	0/0:33,0:33:99:0,99,1552	0/0:18,0:18:54.16:0,54,838	1/1:0,9:9:27.04:261,27,0	1/1:2,16:18:51.04:475,51,0	0/0:22,0:22:63.21:0,63,1005	0/0:27,0:27:78.24:0,78,1179	0/0:22,0:22:66.21:0,66,1027	1/1:1,18:19:55.29:493,55,0	1/1:2,18:19:52.78:496,53,0	1/1:2,19:21:63.04:579,63,0	1/1:1,16:17:51:454,51,0	1/1:2,8:10:30.02:282,30,0	0/0:23,0:23:69.18:0,69,1051	1/1:0,9:9:27.04:274,27,0	1/1:2,19:19:54.01:482,54,0	1/1:5,5:10:17.99:172,18,0	1/1:1,9:10:30:268,30,0	0/0:23,0:23:69.22:0,69,1070	0/0:30,0:30:90.29:0,90,1409	0/0:22,0:22:66.21:0,66,1030	0/0:27,0:27:81.08:0,81,1217	1/1:2,8:10:27.03:253,27,0	0/0:13,0:13:39.13:0,39,623
chr10	38249459	.	CAG	C	3680.98	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=18.158;DP=517;FS=0.347;HRun=0;HaplotypeScore=172.9645;InbreedingCoeff=0.9941;MQ=86.78;MQ0=1;MQRankSum=-16.887;QD=21.40;ReadPosRankSum=3.633;VQSLOD=4.1418;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,129,2581	0/0:10,0:10:30.10:0,30,609	0/0:22,1:23:66.23:0,66,1265	0/0:19,0:19:57.20:0,57,1138	1/1:0,13:13:32.85:249,33,0	0/0:32,0:32:93.31:0,93,1853	0/0:17,0:17:51.18:0,51,1037	1/1:2,6:8:23.18:172,23,0	1/1:0,16:16:44.80:344,45,0	0/0:21,0:21:63.21:0,63,1245	0/0:23,0:23:69.24:0,69,1402	0/0:20,0:20:60.21:0,60,1218	1/1:1,18:19:56.65:425,57,0	1/1:1,18:18:53:394,53,0	1/1:0,19:19:56.73:430,57,0	1/1:1,16:17:50.60:380,51,0	1/1:0,8:8:23.90:185,24,0	0/0:23,0:23:69.24:0,69,1402	1/1:1,6:7:20.66:163,21,0	1/1:2,18:18:53.75:412,54,0	1/1:2,5:7:11.96:94,12,0	1/1:0,9:9:26.86:201,27,0	0/0:24,0:24:72.25:0,72,1458	0/0:29,0:29:87.30:0,87,1751	0/0:23,0:23:69.24:0,69,1365	0/0:25,0:25:75.24:0,75,1479	1/1:1,8:10:29.62:234,30,0	0/0:13,0:13:39.12:0,39,755
chr10	38249462	.	CCTG	C	3037.42	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=17.842;DP=502;FS=1.146;HRun=0;HaplotypeScore=181.3098;InbreedingCoeff=0.9926;MQ=88.92;MQ0=1;MQRankSum=-17.539;QD=18.87;ReadPosRankSum=4.208;VQSLOD=3.6991;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,126,2953	0/0:10,0:10:30.10:0,30,709	0/0:23,0:23:60.20:0,60,1364	0/0:21,0:21:56.34:0,56,1224	1/1:0,13:13:32.74:231,33,0	0/0:31,0:31:93.30:0,93,2120	0/0:17,0:17:51.18:0,51,1184	1/1:0,6:6:17.86:129,18,0	1/1:0,16:16:44.64:316,45,0	0/0:20,0:20:60.20:0,60,1375	0/0:23,0:23:69.22:0,69,1554	0/0:20,0:20:57.20:0,57,1344	1/1:0,18:18:53.57:379,54,0	1/1:1,17:17:50.59:358,51,0	1/1:0,19:19:56.54:400,57,0	1/1:0,16:16:47.62:337,48,0	1/1:0,8:8:23.81:169,24,0	0/0:24,0:24:72.23:0,72,1653	1/1:0,6:6:17.86:129,18,0	1/1:0,18:17:50.59:358,51,0	1/1:0,5:5:11.90:84,12,0	1/1:0,9:9:26.78:189,27,0	0/0:25,0:25:75.25:0,75,1730	0/0:26,0:26:78.27:0,78,1842	0/0:21,0:21:63.22:0,63,1482	0/0:25,0:25:75.25:0,75,1729	1/1:2,7:9:26.79:190,27,0	0/0:13,0:13:39.13:0,39,922
chr10	38249467	.	AGAGGACC	A	10273.43	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=17.909;DP=506;FS=0.000;HRun=0;HaplotypeScore=199.0471;InbreedingCoeff=0.9929;MQ=88.78;MQ0=0;MQRankSum=-17.667;QD=63.42;ReadPosRankSum=4.506;VQSLOD=4.4356;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,123,5047	0/0:12,0:12:36.12:0,36,1482	0/0:24,0:24:69.24:0,69,2656	0/0:20,0:20:60.20:0,60,2157	1/1:0,13:13:33.11:723,33,0	0/0:28,0:28:84.29:0,84,3358	0/0:18,0:18:54.19:0,54,2250	1/1:0,6:6:18.06:411,18,0	1/1:0,16:16:45.15:996,45,0	0/0:21,0:21:63.22:0,63,2613	0/0:21,0:21:63.20:0,63,2485	0/0:19,0:19:57.18:0,57,2151	1/1:0,18:18:54.19:1191,54,0	1/1:0,17:17:51.18:1118,51,0	1/1:0,19:19:57.20:1253,57,0	1/1:0,16:16:48.16:1058,48,0	1/1:0,8:8:24.08:534,24,0	0/0:23,0:23:69.24:0,69,2892	1/1:0,6:6:18.06:411,18,0	1/1:0,20:19:54.13:1143,54,0	1/1:0,5:5:12.04:263,12,0	1/1:0,9:9:27.09:595,27,0	0/0:26,0:26:78.27:0,78,3188	0/0:26,0:26:78.27:0,78,3080	0/0:24,0:24:72.25:0,72,2881	0/0:26,0:26:78.27:0,78,3226	1/1:1,7:9:27.09:578,27,0	0/0:15,0:15:45.15:0,45,1834
chr10	38249474	.	C	CA	4556.15	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=18.719;DP=613;FS=2.199;HRun=0;HaplotypeScore=207.5905;InbreedingCoeff=0.9992;MQ=85.59;MQ0=0;MQRankSum=-18.858;QD=17.66;ReadPosRankSum=-0.574;VQSLOD=4.7134;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,132,1803	0/0:13,0:13:39.12:0,39,527	0/0:27,0:27:78.24:0,78,1060	0/0:22,0:22:53.33:0,53,743	1/1:19,0:19:38.24:257,38,0	0/0:26,0:26:78.24:0,78,1072	0/0:19,0:19:57.18:0,57,780	1/1:23,0:23:65.34:517,65,0	1/1:25,0:25:70.72:452,71,0	0/0:21,0:21:63.20:0,63,851	0/0:24,0:24:63.21:0,63,875	0/0:18,0:18:51.15:0,51,681	1/1:22,4:26:67.62:422,68,0	1/1:20,0:20:58.71:361,59,0	1/1:26,0:26:73.47:480,73,0	1/1:25,0:25:70.61:523,71,0	1/1:12,0:12:29.54:204,30,0	0/0:25,0:25:65.02:0,65,940	1/1:12,0:12:35.83:295,36,0	1/1:25,0:24:58.53:353,59,0	1/1:12,2:14:20.60:131,21,0	1/1:15,0:15:38.15:234,38,0	0/0:25,0:25:72.23:0,72,990	0/0:26,0:26:75.25:0,75,1048	0/0:23,0:23:66.22:0,66,919	0/0:28,0:28:84.26:0,84,1132	1/1:16,0:16:43.12:327,43,0	0/0:14,0:14:42.11:0,42,553
chr10	38250292	.	T	TACAC	7548.25	PASS	AB=0.729;AC=42;AF=0.808;AN=52;BaseQRankSum=-6.646;DP=805;FS=4.349;HRun=0;HaplotypeScore=162.2511;InbreedingCoeff=0.4558;MQ=55.70;MQ0=21;MQRankSum=-0.095;QD=11.44;ReadPosRankSum=-0.840;VQSLOD=4.3633;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:41:59.87:0,60,803	0/1:6,9:15:0.41:68,0,0	./.	./.	1/1:10,20:33:22.32:474,22,0	1/1:13,21:38:25.84:463,26,0	1/1:16,13:31:4.15:82,4,0	1/1:57,0:52:36.69:190,37,0	1/1:7,12:22:26.23:451,26,0	1/1:11,23:35:71.58:1067,72,0	1/1:6,6:14:9.03:217,9,0	0/1:36,0:34:2.26:2,0,149	1/1:9,12:21:12.04:286,12,0	1/1:12,7:21:9.02:161,9,0	1/1:10,17:30:17.78:377,18,0	1/1:6,14:22:15.05:342,15,0	1/1:6,17:25:23.16:578,23,0	0/1:12,11:23:50.52:367,0,51	1/1:18,0:25:7.88:58,8,0	0/1:9,0:24:14.53:15,0,40	1/1:19,0:47:9.29:78,9,0	1/1:6,18:26:14.04:296,14,0	0/0:18,0:18:5.52:0,6,50	0/0:51,0:51:5.07:0,5,363	1/1:10,14:25:20.54:387,21,0	1/1:13,24:35:61.55:1071,62,0	1/1:8,0:21:13.78:62,14,0	1/1:7,10:18:18.46:456,18,0
chr10	38250316	.	CACAT	C	1617.37	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=1.133;DP=814;FS=8.172;HRun=0;HaplotypeScore=177.3296;InbreedingCoeff=0.7526;MQ=57.56;MQ0=19;MQRankSum=-0.119;QD=10.71;ReadPosRankSum=1.791;VQSLOD=2.7122;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:66.11:0,66,1495	0/0:19,0:18:24.84:0,25,203	0/0:16,0:12:26.09:0,26,261	0/0:16,0:10:16.29:0,16,225	0/0:31,0:31:39.17:0,39,562	0/0:36,0:36:50.13:0,50,739	0/0:29,0:29:15.98:0,16,257	0/0:53,0:50:8.07:0,8,694	0/0:22,0:22:39.09:0,39,630	0/0:37,0:36:70.06:0,70,1029	0/0:11,0:11:18.13:0,18,212	1/1:3,40:41:32.92:574,33,0	0/0:27,0:25:35.89:0,36,501	0/0:23,0:22:28.80:0,29,296	0/0:28,0:28:47.06:0,47,610	0/0:21,0:21:27.05:0,27,408	0/0:35,0:34:46.79:0,47,764	0/0:18,0:18:18.37:0,18,491	0/0:16,0:16:12.01:0,12,306	0/0:25,0:24:21.01:0,21,244	0/0:62,0:59:60.75:0,61,819	0/0:25,0:25:32.06:0,32,407	1/1:2,23:25:5.76:114,6,0	1/1:5,42:47:38.03:1055,38,0	0/0:27,0:26:45.08:0,45,672	0/1:36,0:33:14.70:15,0,856	0/0:25,0:23:35.98:0,36,438	0/0:21,0:21:11.29:0,11,561
chr10	38250510	.	A	AG	26305.10	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-10.993;DP=755;FS=7.567;HRun=2;HaplotypeScore=66.1595;InbreedingCoeff=0.9988;MQ=77.83;MQ0=0;MQRankSum=-2.545;QD=39.20;ReadPosRankSum=3.378;VQSLOD=5.3775;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,147,1807	1/1:0,9:10:30.10:426,30,0	0/0:16,0:16:42.04:0,42,471	0/0:18,0:18:29.46:0,29,372	1/1:1,30:31:84.27:1192,84,0	1/1:0,14:14:42.14:605,42,0	1/1:0,28:28:78.26:1123,78,0	1/1:1,18:19:54.18:778,54,0	1/1:2,33:35:99:1420,99,0	1/1:5,37:42:99:1590,111,0	1/1:0,10:10:24.08:345,24,0	1/1:3,43:46:99:1814,126,0	1/1:2,22:24:60.20:861,60,0	1/1:1,38:39:99:1597,111,0	1/1:0,27:27:75.25:1080,75,0	1/1:0,29:29:75.25:1080,75,0	1/1:1,21:22:63.21:907,63,0	1/1:1,26:27:72.24:1037,72,0	1/1:0,17:17:51.17:729,51,0	1/1:0,20:20:51.13:711,51,0	1/1:3,60:63:99:2313,163,0	1/1:1,35:36:99:1488,105,0	1/1:0,22:22:57.19:821,57,0	1/1:0,21:21:60.20:864,60,0	1/1:2,22:24:63.21:907,63,0	1/1:1,25:26:75.24:1062,75,0	1/1:2,22:24:63.21:907,63,0	1/1:0,15:15:45.15:648,45,0
chr10	38255485	.	AAGC	A	25065.36	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=8.705;DP=754;FS=6.547;HRun=0;HaplotypeScore=120.2049;InbreedingCoeff=0.9998;MQ=91.42;MQ0=0;MQRankSum=-9.574;QD=40.89;ReadPosRankSum=4.964;VQSLOD=6.1930;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,39:42:90.31:1470,90,0	1/1:1,16:17:45.15:734,45,0	0/0:34,0:33:75.18:0,75,1562	0/0:33,0:33:77.75:0,78,1439	1/1:0,37:37:93.27:1455,93,0	1/1:1,25:26:60.14:948,60,0	1/1:2,15:17:39.13:625,39,0	1/1:3,24:27:72.23:1145,72,0	1/1:0,23:23:63.22:1028,63,0	1/1:1,34:35:99:1614,102,0	1/1:0,24:24:72.20:1146,72,0	0/0:37,0:37:99:0,105,2269	1/1:2,32:34:90.30:1437,90,0	1/1:1,20:21:57.19:930,57,0	1/1:1,24:25:69.17:1096,69,0	1/1:0,19:19:51.17:814,51,0	1/1:3,27:30:69.63:1127,70,0	1/1:0,21:21:57.19:930,57,0	1/1:1,33:34:87.20:1264,87,0	1/1:1,27:28:78.13:1185,78,0	1/1:0,27:27:63.22:1029,63,0	1/1:3,29:32:72.20:1123,72,0	0/0:19,0:19:51.16:0,51,1089	0/0:18,0:18:54.19:0,54,1187	1/1:2,17:19:39.13:625,39,0	1/1:0,32:32:93.30:1478,93,0	1/1:0,30:30:84.29:1371,84,0	1/1:0,13:13:30.10:490,30,0
chr10	38256450	.	GAGAC	G	2260.32	PASS	AB=0.991;AC=32;AF=0.571;AN=56;BaseQRankSum=5.422;DP=625;FS=1.032;HRun=0;HaplotypeScore=208.8237;InbreedingCoeff=0.3682;MQ=61.66;MQ0=14;MQRankSum=-6.278;QD=5.69;ReadPosRankSum=-7.033;VQSLOD=0.0068;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:20:8.94:67,9,0	0/1:11,0:11:8.73:9,0,16	0/0:33,0:20:31.81:0,32,645	0/0:40,0:20:22.70:0,23,498	0/1:21,0:21:4.86:90,0,5	0/1:22,1:23:8.69:70,0,9	0/1:30,0:30:8.82:89,0,9	1/1:23,0:23:8.91:185,9,0	1/1:18,0:18:17.98:152,18,0	0/1:24,0:24:12.17:60,0,12	0/0:21,0:21:15.89:0,16,33	0/0:31,0:30:87.28:0,87,2197	1/1:21,0:21:4.84:177,5,0	1/1:15,0:15:7.27:53,7,0	1/1:24,0:24:8.06:99,8,0	0/1:25,0:25:10:230,0,10	1/1:18,0:17:12.67:100,13,0	0/0:21,1:22:2.40:0,2,45	1/1:15,0:15:30.57:249,31,0	0/1:14,0:14:5.44:41,0,5	1/1:9,0:9:3:25,3,0	1/1:21,0:20:18.01:189,18,0	0/0:24,0:24:63.16:0,63,1487	0/0:34,0:34:99:0,102,2496	0/0:22,1:23:15.42:0,15,32	0/1:31,1:31:14.30:128,0,14	1/1:21,0:20:34.67:328,35,0	1/1:12,0:10:10.24:110,10,0
chr10	38256452	.	GAC	G	8955.95	PASS	AB=0.860;AC=43;AF=0.768;AN=56;BaseQRankSum=7.771;DP=616;FS=0.837;HRun=0;HaplotypeScore=165.8313;InbreedingCoeff=0.6421;MQ=61.70;MQ0=15;MQRankSum=-0.197;QD=19.77;ReadPosRankSum=-1.487;VQSLOD=4.9233;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:17,3:20:8.95:68,9,0	1/1:1,10:11:33.10:474,33,0	0/0:33,0:20:25.25:0,25,501	0/0:40,0:20:19.35:0,19,417	1/1:17,3:20:0.15:93,0,0	1/1:8,15:23:63.16:878,63,0	1/1:10,20:30:90.18:1241,90,0	1/1:15,7:21:32.80:421,33,0	1/1:10,8:18:17.68:131,18,0	1/1:5,18:23:69.06:939,69,0	1/1:0,21:21:42.14:641,42,0	0/0:31,0:30:90.26:0,90,1630	0/1:17,2:19:14.26:99,0,14	0/1:12,3:15:6.91:20,0,7	1/1:18,5:23:13.59:106,14,0	1/1:12,13:25:16.25:195,16,0	0/1:13,3:15:7.25:52,0,7	1/1:7,15:22:64.51:877,65,0	1/1:12,3:15:27.52:184,28,0	1/1:10,4:14:14.66:110,15,0	1/1:9,0:9:5.99:50,6,0	1/1:16,5:20:23.82:182,24,0	0/0:23,0:23:42.55:0,43,1060	0/0:35,0:35:94.67:0,95,1806	1/1:2,22:24:42.13:620,42,0	1/1:4,25:28:78.19:1099,78,0	1/1:13,8:20:8.31:157,8,0	1/1:6,6:10:29.95:319,30,0
chr10	38256458	.	GAC	G	1328.47	PASS	AB=0.900;AC=26;AF=0.464;AN=56;BaseQRankSum=7.005;DP=602;FS=19.863;HRun=0;HaplotypeScore=184.3182;InbreedingCoeff=0.5048;MQ=57.82;MQ0=19;MQRankSum=-7.519;QD=4.57;ReadPosRankSum=-3.016;VQSLOD=1.1738;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,3:17:5.99:48,6,0	0/0:12,0:12:0.95:0,1,50	0/0:30,0:16:31.07:0,31,357	0/1:45,0:15:13.39:13,0,188	0/1:17,3:19:4.16:73,0,4	0/0:22,0:22:28.96:0,29,124	0/0:31,0:31:47.80:0,48,242	1/1:20,0:18:26.80:365,27,0	1/1:8,8:16:11.69:82,12,0	0/0:25,0:25:58.89:0,59,296	0/0:23,0:23:24.66:0,25,95	0/0:33,0:32:96.23:0,96,1698	0/1:13,2:15:20.22:61,0,20	0/1:11,3:14:7.19:19,0,7	1/1:17,5:22:14.02:106,14,0	1/1:11,12:23:10.25:144,10,0	0/1:11,3:13:14.01:16,0,14	0/0:22,0:22:16.26:0,16,94	1/1:13,3:15:25.44:166,25,0	1/1:8,4:12:8.99:75,9,0	1/1:8,0:8:3:25,3,0	1/1:13,4:16:20.84:158,21,0	0/0:22,0:22:57.04:0,57,945	0/0:39,0:39:99:0,117,1822	0/0:25,0:25:25.15:0,25,124	0/0:27,0:26:49.49:0,49,263	1/1:12,8:19:8.04:155,8,0	0/1:12,0:10:20.03:20,0,89
chr10	38256470	.	CAG	C	209.91	PASS	AB=0.958;AC=11;AF=0.204;AN=54;BaseQRankSum=5.990;DP=586;FS=4.498;HRun=0;HaplotypeScore=202.5890;InbreedingCoeff=0.2840;MQ=45.24;MQ0=23;MQRankSum=-4.108;QD=1.12;ReadPosRankSum=-1.766;VQSLOD=2.4781;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:20,1:20:0:0,0,0	0/0:14,0:14:42.14:0,42,709	0/0:16,0:7:18.06:0,18,289	0/0:42,0:4:8.98:0,9,81	0/0:19,1:19:1.55:0,2,4	0/0:20,0:20:48.16:0,48,879	0/0:28,0:28:72.23:0,72,1242	1/1:18,3:16:23.58:169,24,0	0/0:20,0:20:1.90:0,2,8	0/0:27,0:25:72.22:0,72,1180	0/0:22,0:22:45.15:0,45,804	0/0:31,0:30:87.27:0,87,1499	0/1:10,1:11:10.65:25,0,11	0/1:15,2:17:13.39:16,0,13	0/1:24,1:25:1.06:1,0,5	0/1:25,0:25:0.68:33,0,1	0/0:16,0:15:1.05:0,1,17	0/0:23,0:23:63.16:0,63,1087	0/1:15,1:15:21.29:21,0,60	0/1:14,0:14:0:0,0,0	./.	0/1:16,0:13:0.67:39,0,1	0/0:21,0:21:46.39:0,46,745	0/0:33,0:33:96.33:0,96,1752	0/0:25,0:25:51.03:0,51,901	0/0:23,0:21:60.08:0,60,960	0/1:21,1:21:18.73:37,0,19	0/0:12,0:10:28.33:0,28,446
chr10	38256472	.	G	GAC	455.49	PASS	AB=0.974;AC=13;AF=0.241;AN=54;BaseQRankSum=5.122;DP=580;FS=8.943;HRun=0;HaplotypeScore=203.7357;InbreedingCoeff=0.3125;MQ=43.58;MQ0=23;MQRankSum=-5.037;QD=2.24;ReadPosRankSum=-2.205;VQSLOD=1.5463;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:21,0:20:0.13:0,0,0	0/0:14,0:14:42.14:0,42,636	0/0:16,0:7:18.06:0,18,271	0/0:42,0:3:6.48:0,6,72	0/0:20,1:20:1.52:0,2,4	0/0:19,0:19:48.08:0,48,735	0/0:26,0:26:72.23:0,72,1072	1/1:19,3:15:29.93:330,30,0	0/0:19,0:19:4.75:0,5,23	0/0:27,0:25:72.24:0,72,1064	0/0:21,0:21:45.15:0,45,687	0/0:30,0:29:87.27:0,87,1286	1/1:12,0:12:6.57:62,7,0	0/1:16,1:17:17.95:48,0,18	0/1:23,1:24:1.02:1,0,5	0/1:21,2:23:1.93:57,0,2	0/1:15,1:15:16.94:21,0,17	0/0:23,0:23:63.16:0,63,930	0/1:16,0:15:14.10:14,0,112	0/1:13,0:13:0.03:0,0,0	./.	0/1:17,0:13:2.65:36,0,3	0/0:20,0:20:46.39:0,46,667	0/0:34,0:34:99:0,99,1492	0/0:25,0:25:51.17:0,51,775	0/0:23,0:21:63.08:0,63,870	0/1:22,0:21:28.20:28,0,59	0/0:12,0:10:28.34:0,28,409
chr10	38256484	.	CAGAGACAG	C	1127.59	PASS	AB=0.888;AC=17;AF=0.304;AN=56;BaseQRankSum=8.351;DP=564;FS=6.816;HRun=0;HaplotypeScore=234.8910;InbreedingCoeff=0.4269;MQ=43.16;MQ0=25;MQRankSum=-9.025;QD=5.64;ReadPosRankSum=-1.478;VQSLOD=1.6164;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:23,1:24:0.10:1,0,0	0/0:13,0:13:33.11:0,33,1129	0/0:16,0:4:9.03:0,9,198	0/0:42,0:3:6.02:0,6,125	0/1:18,0:17:0.17:0,0,0	0/0:23,0:23:63.20:0,63,1929	0/0:29,0:29:75.73:0,76,2311	1/1:14,0:12:3.19:272,3,0	1/1:11,5:17:4.20:53,4,0	0/0:24,0:22:63.22:0,63,1944	0/0:20,0:20:39.10:0,39,1001	0/0:31,0:30:87.28:0,87,3006	0/1:9,0:11:14.22:113,0,14	0/1:13,0:14:6.52:50,0,7	0/0:18,3:22:2.74:0,3,18	1/1:10,7:21:13.86:231,14,0	1/1:14,3:16:15.03:172,15,0	0/0:22,0:22:60.21:0,60,1888	0/1:10,0:11:32.11:108,0,32	0/1:11,1:13:0.01:1,0,0	0/1:9,0:8:0.21:0,0,0	0/0:9,2:9:1.80:0,2,5	0/0:19,0:19:45.15:0,45,1403	0/0:36,0:36:99:0,108,3944	0/0:23,0:23:41.82:0,42,1490	0/0:18,0:17:48.15:0,48,1468	0/1:15,6:21:13.70:277,0,14	0/0:10,0:10:30.10:0,30,973
chr10	38256486	.	G	GAC	328.83	PASS	AB=0.984;AC=15;AF=0.268;AN=56;BaseQRankSum=8.022;DP=572;FS=1.498;HRun=0;HaplotypeScore=208.2143;InbreedingCoeff=0.2188;MQ=44.23;MQ0=26;MQRankSum=-8.688;QD=1.40;ReadPosRankSum=-1.914;VQSLOD=1.9706;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:23:0.11:0,0,0	0/0:13,0:13:33.11:0,33,504	0/0:20,0:5:9.03:0,9,136	0/0:49,0:7:11.96:0,12,124	0/1:15,0:14:0:0,0,0	0/0:24,0:24:60.10:0,60,893	0/0:28,0:28:77.72:0,78,1085	0/1:20,0:12:37.03:92,0,37	0/1:17,0:17:7.26:7,0,14	0/0:23,0:21:63.21:0,63,943	0/0:20,0:20:39.10:0,39,545	0/0:30,0:29:87.27:0,87,1303	0/1:11,1:12:1.83:98,0,2	0/1:14,0:14:25.35:31,0,25	0/1:21,1:22:0:0,0,0	1/1:19,2:21:11.83:80,12,0	0/1:17,1:17:26.70:70,0,27	0/0:22,0:22:60.16:0,60,891	0/1:12,0:11:35.64:36,0,77	0/1:13,0:12:0.07:0,0,0	0/1:9,0:8:0.10:0,0,0	0/1:13,0:9:0:0,0,1	0/0:19,0:19:48.13:0,48,683	0/0:37,0:37:99:0,108,1625	0/0:22,0:22:42.14:0,42,639	0/0:18,0:16:48.15:0,48,696	0/1:24,1:24:48.15:48,0,77	0/0:12,0:12:30.06:0,30,433
chr10	38256490	.	CAG	C	123.63	PASS	AB=0.902;AC=16;AF=0.286;AN=56;BaseQRankSum=7.554;DP=564;FS=10.015;HRun=0;HaplotypeScore=201.2660;InbreedingCoeff=0.3848;MQ=44.42;MQ0=23;MQRankSum=-7.802;QD=0.66;ReadPosRankSum=-0.652;VQSLOD=1.8539;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,1:23:2.64:0,3,24	0/0:14,0:14:31.35:0,31,519	0/0:20,0:7:12.82:0,13,177	0/0:53,0:10:15.26:0,15,238	0/1:14,0:14:0.15:0,0,0	0/0:23,0:23:56.68:0,57,934	0/0:29,1:30:78.96:0,79,1187	0/1:11,7:10:5.68:117,0,6	1/1:16,1:17:1.92:6,2,0	0/0:23,0:21:49.40:0,49,807	0/0:17,0:17:21.07:0,21,370	0/0:30,0:29:84.27:0,84,1436	0/1:11,2:13:8.05:11,0,8	0/0:12,1:13:2.30:0,2,22	0/1:17,1:18:0.02:0,0,0	1/1:16,4:20:9.85:38,10,0	1/1:18,0:17:3.91:15,4,0	0/0:23,0:23:60.93:0,61,952	0/1:10,2:12:43.95:44,0,61	0/1:11,2:12:0:0,0,0	0/1:10,0:8:0:0,0,0	1/1:11,2:9:0.47:1,0,0	0/0:20,0:20:51.16:0,51,824	0/0:36,0:36:99:0,105,1848	0/0:21,0:21:40.24:0,40,679	0/0:16,0:14:39.13:0,39,666	0/1:21,1:21:21.70:22,0,62	0/0:12,0:12:34.32:0,34,513
chr10	38256505	.	A	ACT	124.19	PASS	AB=0.969;AC=8;AF=0.143;AN=56;BaseQRankSum=4.201;DP=656;FS=1.545;HRun=0;HaplotypeScore=220.9705;InbreedingCoeff=0.1442;MQ=50.26;MQ0=28;MQRankSum=-2.233;QD=1.07;ReadPosRankSum=-0.168;VQSLOD=2.7615;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:6.02:0,6,98	0/0:16,0:14:33.11:0,33,537	0/0:52,0:18:36.48:0,36,461	0/0:80,0:23:38.32:0,38,399	0/1:15,0:15:0:0,0,0	0/0:22,0:22:48.16:0,48,782	0/0:29,0:27:72.70:0,73,1146	0/0:24,0:16:36.08:0,36,516	0/0:21,1:22:3.01:0,3,49	0/0:19,0:15:43.96:0,44,692	0/0:15,0:13:21.02:0,21,342	0/0:27,0:27:81.28:0,81,1319	0/1:13,1:14:29.59:30,0,240	0/1:13,1:14:45.07:45,0,152	0/0:20,2:22:3.01:0,3,49	1/1:20,0:20:2.83:54,3,0	0/1:17,1:17:87.28:87,0,284	0/0:23,0:22:51.11:0,51,777	0/0:15,0:15:36.12:0,36,580	0/0:15,0:14:2.85:0,3,49	0/1:11,0:9:0.25:0,0,0	0/0:18,0:14:2.52:0,3,49	0/0:21,0:21:54.17:0,54,846	0/0:39,0:39:99:0,111,1779	0/0:20,0:20:47.73:0,48,693	0/0:17,0:15:39.13:0,39,636	0/1:24,0:23:24.32:24,0,425	0/0:11,0:11:29.53:0,30,446
chr10	38256514	.	G	GAC	3576.68	PASS	AB=0.786;AC=17;AF=0.304;AN=56;BaseQRankSum=-4.955;DP=689;FS=2.342;HRun=0;HaplotypeScore=213.7495;InbreedingCoeff=0.5533;MQ=57.34;MQ0=27;MQRankSum=5.117;QD=18.06;ReadPosRankSum=4.729;VQSLOD=3.9583;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:5.91:0,6,74	0/1:6,10:14:12.54:317,0,13	0/0:75,0:31:42.86:0,43,533	0/0:100,0:37:45.80:0,46,484	0/1:15,0:15:0:0,0,0	1/1:4,17:21:36.11:559,36,0	1/1:10,17:26:5.50:596,6,0	0/0:25,0:19:35.57:0,36,361	0/0:21,0:23:5.75:0,6,55	1/1:4,15:15:36.09:525,36,0	1/1:8,5:11:18.05:269,18,0	0/0:24,0:26:68.76:0,69,785	0/0:15,0:15:18.06:0,18,215	0/0:15,0:15:14.87:0,15,162	0/0:21,0:22:3.01:0,3,36	0/0:16,0:18:4.99:0,5,25	0/0:20,0:20:20.09:0,20,222	0/1:10,15:24:99:353,0,110	0/0:16,0:15:27.08:0,27,326	0/0:14,0:13:2.84:0,3,36	0/0:13,0:11:0.68:0,1,2	0/1:16,0:14:0:0,0,0	0/0:19,0:20:29.68:0,30,448	0/0:35,0:35:72.23:0,72,879	1/1:12,7:19:26.76:387,27,0	1/1:9,6:13:21.07:336,21,0	0/0:22,0:22:31.33:0,31,358	0/1:6,5:11:49.34:234,0,49
chr10	38256535	.	TGACTGA	T	3443.75	PASS	AB=0.603;AC=25;AF=0.446;AN=56;BaseQRankSum=7.916;DP=720;FS=1.161;HRun=0;HaplotypeScore=235.4277;InbreedingCoeff=0.8477;MQ=70.03;MQ0=18;MQRankSum=-8.162;QD=11.83;ReadPosRankSum=0.651;VQSLOD=2.3990;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,17:32:3.48:65,3,0	0/0:14,0:12:24.08:0,24,780	0/0:83,0:47:54.99:0,55,1475	0/0:110,0:56:40.86:0,41,1373	0/1:3,18:21:0.15:0,0,0	0/0:18,0:18:27.09:0,27,869	0/0:28,0:26:48.16:0,48,1418	1/1:9,11:19:33.10:545,33,0	1/1:8,17:24:12.04:258,12,0	0/0:21,0:17:42.12:0,42,1180	0/0:15,0:13:27.08:0,27,758	0/0:22,0:22:48.15:0,48,1416	1/1:4,12:16:18.06:386,18,0	1/1:5,13:18:12.04:258,12,0	1/1:6,19:25:3.01:65,3,0	1/1:4,15:19:6.02:129,6,0	1/1:9,13:22:18.06:386,18,0	0/0:23,0:22:45.15:0,45,1365	1/1:13,9:21:27.08:499,27,0	1/1:2,15:16:11.88:257,12,0	0/1:8,6:14:0:0,0,0	0/1:4,12:14:0:0,0,0	0/0:20,0:20:54.19:0,54,1662	0/0:28,0:28:60.19:0,60,1799	0/0:17,0:17:35.78:0,36,971	0/0:14,0:14:30.10:0,30,951	1/1:4,20:23:30.10:597,30,0	0/0:13,0:13:27.09:0,27,749
chr10	38256834	.	T	TCCC	25360.14	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-12.663;DP=626;FS=21.390;HRun=4;HaplotypeScore=75.7082;InbreedingCoeff=0.9914;MQ=85.06;MQ0=0;MQRankSum=-8.276;QD=49.53;ReadPosRankSum=4.685;VQSLOD=3.4444;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,34:39:84.27:1827,84,0	1/1:1,9:10:20.81:469,21,0	0/0:28,0:29:77.81:0,78,1028	0/0:19,0:19:47.74:0,48,684	1/1:2,16:18:33.07:688,33,0	1/1:2,15:18:39.09:824,39,0	1/1:3,30:33:81.28:1803,81,0	1/1:6,21:27:63.03:1155,63,0	1/1:0,21:21:63.22:1406,63,0	1/1:1,19:21:60.11:1147,60,0	1/1:1,15:16:33.11:735,33,0	0/0:23,0:23:66.17:0,66,927	1/1:3,24:27:57.20:1269,57,0	1/1:1,23:24:60.16:1292,60,0	1/1:0,29:30:81.28:1807,81,0	1/1:1,16:18:36.08:756,36,0	1/1:4,23:28:51.18:1138,51,0	1/1:0,13:14:36.12:796,36,0	1/1:3,18:22:56.92:1123,57,0	1/1:0,7:7:12.04:267,12,0	1/1:2,45:48:93.79:2078,94,0	1/1:1,12:13:33.11:726,33,0	0/0:15,0:15:33.11:0,33,505	0/0:28,0:28:81.27:0,81,1242	1/1:2,18:20:36.12:802,36,0	1/1:2,20:22:60.19:1245,60,0	1/1:2,22:25:60.21:1339,60,0	1/1:0,10:10:30.10:669,30,0
chr10	38257825	.	T	TC	1374.79	PASS	AB=0.772;AC=20;AF=0.435;AN=46;BaseQRankSum=5.075;DP=103;FS=0.000;HRun=1;HaplotypeScore=29.9116;InbreedingCoeff=0.4640;MQ=90.62;MQ0=1;MQRankSum=-5.096;QD=20.83;ReadPosRankSum=2.613;VQSLOD=3.6794;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,6:8:18.06:269,18,0	0/0:1,0:1:3.01:0,3,42	0/0:5,0:5:11.82:0,12,115	0/1:11,0:8:7.47:7,0,137	./.	0/0:2,0:2:6.02:0,6,84	0/0:2,0:2:6.02:0,6,83	0/1:1,6:7:0.89:243,0,1	1/1:0,3:4:9.03:131,9,0	0/0:3,0:3:9.03:0,9,126	0/0:3,0:3:9.03:0,9,126	0/0:3,0:3:9.03:0,9,123	./.	1/1:0,0:2:3.01:43,3,0	0/1:1,1:4:27.38:117,0,27	1/1:0,4:4:9.03:134,9,0	1/1:0,6:7:12.04:174,12,0	0/0:2,0:2:6.02:0,6,81	0/1:3,2:6:9.04:142,0,9	1/1:0,2:3:3.01:45,3,0	1/1:2,4:7:11:141,11,0	./.	0/0:3,0:3:9.03:0,9,126	0/0:3,0:3:8.99:0,9,104	./.	0/0:5,0:5:15.04:0,15,196	1/1:0,3:3:6.02:89,6,0	./.
chr10	38258110	.	A	AT	13057.87	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=18.138;DP=561;FS=0.338;HRun=1;HaplotypeScore=95.0979;InbreedingCoeff=0.9965;MQ=84.81;MQ0=0;MQRankSum=-5.298;QD=42.81;ReadPosRankSum=3.172;VQSLOD=4.7745;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,35:38:90.31:1436,90,0	0/0:9,0:9:27.09:0,27,378	0/0:26,0:26:72.03:0,72,935	0/0:32,0:32:96.32:0,96,1328	1/1:0,17:17:48.16:766,48,0	0/0:20,0:20:60.20:0,60,839	0/0:22,0:22:63.21:0,63,881	1/1:2,27:29:84.29:1333,84,0	1/1:0,14:14:39.13:623,39,0	0/0:7,0:7:18.06:0,18,252	0/0:14,0:14:38.94:0,39,543	0/0:15,0:15:45.15:0,45,626	1/1:0,21:21:60.20:958,60,0	1/1:1,16:17:42.14:671,42,0	1/1:2,23:25:63.21:1002,63,0	1/1:0,13:13:36.12:575,36,0	1/1:1,27:28:75.26:1198,75,0	0/0:29,0:29:87.23:0,87,1173	1/1:2,13:15:42.14:671,42,0	1/1:0,20:20:57.19:910,57,0	1/1:1,28:29:78.27:1247,78,0	1/1:0,17:17:51.17:815,51,0	0/0:13,0:13:39.13:0,39,545	0/0:31,0:31:93.31:0,93,1296	0/0:17,0:17:51.17:0,51,713	0/0:16,0:16:48.16:0,48,670	1/1:2,20:22:54.18:854,54,0	0/0:5,0:5:15.05:0,15,210
chr10	38258525	.	C	CCCGA	6427.33	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=13.114;DP=524;FS=65.827;HRun=0;HaplotypeScore=105.3926;InbreedingCoeff=0.9406;MQ=54.13;MQ0=3;MQRankSum=-11.104;QD=38.26;ReadPosRankSum=-2.239;VQSLOD=2.0599;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,10:8:9.03:260,9,0	0/0:12,0:12:30.10:0,30,629	0/0:25,0:23:63.20:0,63,1202	0/0:12,0:8:24.08:0,24,494	1/1:3,16:17:14.58:370,15,0	0/0:35,0:35:99:0,105,2109	0/0:20,0:20:57.20:0,57,1174	1/1:8,3:5:14.92:186,15,0	1/1:2,9:9:27.09:703,27,0	0/0:36,0:36:99:0,105,2083	0/0:30,0:30:72.25:0,72,1496	0/0:26,0:26:78.27:0,78,1563	1/1:3,16:15:33.10:761,33,0	1/1:2,9:10:21.06:510,21,0	1/1:2,13:12:30.06:711,30,0	1/1:0,12:11:24.08:691,24,0	1/1:0,4:5:6.02:173,6,0	0/0:25,0:25:69.21:0,69,1381	1/1:2,6:6:6.01:113,6,0	1/1:2,19:17:27.09:741,27,0	1/1:0,3:2:6.02:173,6,0	1/1:1,10:7:15.05:342,15,0	0/0:35,0:35:96.21:0,96,1984	0/0:30,0:30:90.22:0,90,1778	0/0:26,0:26:69.21:0,69,1372	0/0:22,0:22:66.23:0,66,1383	1/1:2,9:10:27.09:693,27,0	0/0:22,0:22:63.22:0,63,1321
chr10	38258531	.	G	GTAACCCAATCACAGA	11299.29	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=12.586;DP=514;FS=85.110;HRun=0;HaplotypeScore=190.1029;InbreedingCoeff=0.9035;MQ=54.11;MQ0=2;MQRankSum=-12.646;QD=75.33;ReadPosRankSum=-0.765;VQSLOD=1.0076;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,5:9:8.95:366,9,0	0/0:12,0:12:36.12:0,36,1584	0/0:23,0:22:65.98:0,66,1893	0/0:11,0:10:30.08:0,30,917	1/1:7,8:14:12.43:541,12,0	0/0:34,0:34:99:0,99,4322	0/0:21,0:21:63.18:0,63,2578	1/1:7,0:1:3.01:40,3,0	1/1:7,3:7:18.06:821,18,0	0/0:37,0:37:99:0,111,4498	0/0:30,0:30:75.19:0,75,3118	0/0:25,0:25:75.23:0,75,3013	1/1:8,7:12:21.07:1229,21,0	1/1:5,6:10:21.04:1323,21,0	1/1:6,7:9:21.04:1304,21,0	1/1:8,6:12:24.08:1376,24,0	1/1:3,1:3:6.02:457,6,0	0/0:26,0:26:69.13:0,69,2805	1/1:4,3:3:3.01:101,3,0	1/1:7,12:15:24.08:1617,24,0	1/1:1,2:2:6.02:376,6,0	1/1:5,5:6:12.04:625,12,0	0/0:38,0:38:96.16:0,96,3894	0/0:33,0:33:96.31:0,96,3998	0/0:27,0:27:75.25:0,75,3183	0/0:23,0:23:69.23:0,69,2720	1/1:7,2:8:21.07:1122,21,0	0/0:24,0:24:69.21:0,69,2772
chr10	38258573	.	GC	G	1530.70	PASS	AC=22;AF=0.440;AN=50;BaseQRankSum=11.556;DP=467;FS=4.300;HRun=4;HaplotypeScore=67.8082;InbreedingCoeff=0.9259;MQ=54.87;MQ0=9;MQRankSum=-11.111;QD=17.39;ReadPosRankSum=-3.874;VQSLOD=2.6223;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:1,3:3:6.02:72,6,0	0/0:12,0:12:36.12:0,36,503	0/0:24,2:18:42.84:0,43,627	0/0:13,1:9:21.02:0,21,252	1/1:1,13:12:18.06:215,18,0	0/0:25,0:25:69.23:0,69,966	0/0:22,0:22:57.16:0,57,763	./.	./.	0/0:37,0:37:99:0,105,1396	0/0:33,0:33:90.27:0,90,1218	0/0:32,0:32:96.26:0,96,1302	1/1:2,8:10:18.02:200,18,0	1/1:1,10:11:21.06:251,21,0	1/1:0,6:5:15.05:179,15,0	1/1:2,9:10:18.02:200,18,0	1/1:0,2:2:6.02:72,6,0	0/0:39,0:39:99:0,117,1604	1/1:3,2:1:3.01:36,3,0	1/1:5,5:10:14.87:127,15,0	./.	1/1:0,7:7:15.05:179,15,0	0/0:35,0:35:93.21:0,93,1300	0/0:28,0:28:81.25:0,81,1101	0/0:30,0:30:87.29:0,87,1218	0/0:21,0:21:63.19:0,63,848	1/1:2,6:8:18.03:201,18,0	0/0:12,0:12:36.10:0,36,486
chr10	38258663	.	T	TA	5422.92	PASS	AB=0.578;AC=27;AF=0.482;AN=56;BaseQRankSum=10.798;DP=528;FS=12.380;HRun=4;HaplotypeScore=114.1442;InbreedingCoeff=0.8619;MQ=47.49;MQ0=12;MQRankSum=-11.451;QD=23.89;ReadPosRankSum=-1.889;VQSLOD=2.9783;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,5:5:12.04:163,12,0	0/0:11,0:11:21.03:0,21,225	0/0:12,0:3:8.98:0,9,87	0/0:12,0:3:5.99:0,6,56	1/1:6,23:28:71.90:862,72,0	0/0:25,0:25:63.18:0,63,714	0/0:22,0:21:54.12:0,54,584	0/1:7,19:14:0.91:311,0,1	1/1:2,13:10:30.06:383,30,0	0/0:21,0:21:60.15:0,60,658	0/0:26,0:26:75.18:0,75,825	0/0:25,0:25:66.14:0,66,739	1/1:7,12:17:33.07:423,33,0	1/1:4,7:9:18.03:225,18,0	1/1:5,13:15:33.11:443,33,0	1/1:5,5:8:9.03:122,9,0	1/1:1,5:5:6.02:78,6,0	0/0:34,0:34:81.18:0,81,895	1/1:5,3:4:3.01:41,3,0	1/1:4,26:29:81.09:1028,81,0	1/1:2,3:4:3.01:41,3,0	1/1:6,22:24:60.11:776,60,0	0/0:23,0:23:60.15:0,60,670	0/0:23,0:23:59.82:0,60,632	0/0:23,0:23:57.13:0,57,627	0/0:32,0:32:93.20:0,93,1016	1/1:3,13:15:42.04:526,42,0	0/0:12,0:12:27.08:0,27,306
chr10	38258688	.	AG	A	2909.64	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=14.642;DP=477;FS=24.784;HRun=6;HaplotypeScore=137.0287;InbreedingCoeff=0.9049;MQ=54.51;MQ0=8;MQRankSum=-13.812;QD=19.53;ReadPosRankSum=1.420;VQSLOD=1.9829;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,2:3:3.01:32,3,0	0/0:6,0:6:15.05:0,15,197	0/0:22,0:15:42.06:0,42,499	0/0:27,0:23:63.15:0,63,783	1/1:2,19:20:45.09:474,45,0	0/0:31,0:31:81.25:0,81,1051	0/0:16,0:16:33.11:0,33,434	0/0:8,0:3:3:0,3,26	1/1:2,7:7:15.04:161,15,0	0/0:26,0:26:66.21:0,66,848	0/0:23,0:23:66.21:0,66,866	0/0:29,0:29:71.96:0,72,933	1/1:1,10:9:24.05:257,24,0	1/1:1,5:5:9.02:97,9,0	1/1:0,13:11:30.07:322,30,0	1/1:0,7:7:17.96:178,18,0	1/1:1,11:9:21.05:224,21,0	0/0:33,0:33:87.24:0,87,1123	1/1:0,2:1:3.01:32,3,0	1/1:4,20:23:57.14:612,57,0	1/1:0,4:4:9.02:96,9,0	1/1:3,18:17:33.08:354,33,0	0/0:21,0:21:54.18:0,54,710	0/0:22,1:23:30.98:0,31,728	0/0:24,0:24:60.18:0,60,776	0/0:29,0:29:84.27:0,84,1103	1/1:5,11:15:27.06:290,27,0	0/0:9,0:9:24.08:0,24,316
chr10	38258698	.	T	TA	4143.89	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=15.475;DP=481;FS=42.293;HRun=1;HaplotypeScore=148.2527;InbreedingCoeff=0.9285;MQ=52.89;MQ0=5;MQRankSum=-14.436;QD=26.23;ReadPosRankSum=0.047;VQSLOD=0.4121;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,2:3:9.03:113,9,0	0/0:5,0:5:15.05:0,15,195	0/0:30,0:21:60.13:0,60,726	0/0:31,0:28:64.77:0,65,820	1/1:4,18:21:42.11:458,42,0	0/0:30,0:30:78.25:0,78,1012	0/0:19,0:18:33.11:0,33,428	0/0:4,0:2:3.01:0,3,36	1/1:0,12:10:30.10:380,30,0	0/0:23,0:23:69.22:0,69,895	0/0:21,0:21:63.20:0,63,817	0/0:27,0:27:75.21:0,75,973	1/1:3,8:10:29.89:336,30,0	1/1:1,5:5:12.04:145,12,0	1/1:2,15:14:36.12:463,36,0	1/1:1,7:8:21.05:252,21,0	1/1:2,11:9:24.08:307,24,0	0/0:31,0:31:81.26:0,81,1049	1/1:1,2:1:3.01:45,3,0	1/1:1,20:21:60.17:705,60,0	1/1:0,6:6:9.03:110,9,0	1/1:6,16:18:41.94:452,42,0	0/0:19,0:19:51.17:0,51,661	0/0:22,0:22:66.20:0,66,841	0/0:24,0:24:60.18:0,60,764	0/0:26,0:26:72.23:0,72,933	1/1:2,11:12:30.09:378,30,0	0/0:11,0:11:30.10:0,30,389
chr10	38258706	.	CA	C	9011.13	PASS	AC=44;AF=0.815;AN=54;BaseQRankSum=10.278;DP=460;FS=18.395;HRun=4;HaplotypeScore=121.9818;InbreedingCoeff=0.9341;MQ=53.08;MQ0=7;MQRankSum=-5.455;QD=27.14;ReadPosRankSum=3.237;VQSLOD=3.2219;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,3:3:6.01:57,6,0	1/1:0,4:4:12.04:144,12,0	0/0:27,1:16:47.35:0,47,602	0/0:31,0:28:73.54:0,74,914	1/1:0,19:19:50.84:436,51,0	1/1:5,25:30:63.19:756,63,0	1/1:1,16:16:36.11:429,36,0	./.	1/1:0,12:10:30.05:292,30,0	1/1:1,22:23:66.20:792,66,0	1/1:1,19:20:54.17:648,54,0	0/0:27,0:27:77.99:0,78,1092	1/1:0,9:7:21.03:204,21,0	1/1:0,8:7:18.02:178,18,0	1/1:1,14:13:36.06:361,36,0	1/1:0,7:7:21.04:211,21,0	1/1:2,11:9:24.02:238,24,0	1/1:1,30:31:78.24:936,78,0	1/1:2,3:3:6:57,6,0	1/1:1,20:21:59.95:534,60,0	1/1:2,4:6:12.01:114,12,0	1/1:2,16:17:44.74:393,45,0	0/0:17,0:17:45.14:0,45,613	0/0:20,1:21:27.30:0,27,802	1/1:1,21:22:54.16:648,54,0	1/1:1,26:26:75.21:887,75,0	1/1:0,11:10:30.03:299,30,0	1/1:0,11:11:33.10:396,33,0
chr10	38259814	.	G	GTGTGTGTA	1795.13	PASS	AB=0.949;AC=16;AF=0.296;AN=54;BaseQRankSum=3.675;DP=465;FS=1.397;HRun=0;HaplotypeScore=157.8125;InbreedingCoeff=0.3246;MQ=47.42;MQ0=22;MQRankSum=-5.429;QD=9.81;ReadPosRankSum=-2.862;VQSLOD=1.6442;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:38,0:37:47.30:47,0,59	0/0:1,0:1:0.47:0,0,1	0/0:5,0:1:1.82:0,2,5	./.	1/1:20,0:20:10.91:220,11,0	0/0:19,0:16:42.49:0,42,452	0/0:18,0:18:36:0,36,512	0/1:25,0:23:93.32:158,0,93	0/0:14,2:13:16.30:0,16,81	0/0:23,0:23:47.45:0,47,642	0/0:15,0:14:30.05:0,30,455	0/0:23,0:22:27.45:0,27,684	0/1:5,3:9:9.54:87,0,10	1/1:16,0:16:2.74:114,3,0	1/1:7,1:8:2.66:112,3,0	1/1:10,0:10:12.04:304,12,0	0/1:23,0:23:61.11:110,0,61	0/0:22,0:22:23:0,23,612	0/1:11,0:7:23.88:73,0,24	1/1:11,0:11:11.84:148,12,0	0/0:11,0:11:4.73:0,5,22	0/0:17,7:26:6.79:0,7,31	0/0:20,0:19:35.99:0,36,571	0/0:29,0:29:69.07:0,69,1246	0/0:23,0:22:48.54:0,49,817	0/0:15,0:14:26.02:0,26,327	0/1:12,0:11:16.63:586,0,17	0/0:4,0:4:11.96:0,12,93
chr10	38259821	.	T	TATGTGTGTGCGC	5846.96	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-4.147;DP=457;FS=0.000;HRun=0;HaplotypeScore=166.3701;InbreedingCoeff=0.8290;MQ=50.82;MQ0=14;MQRankSum=-3.249;QD=24.99;ReadPosRankSum=-2.764;VQSLOD=3.5576;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:36,0:36:41.60:719,42,0	0/0:2,0:2:3.47:0,3,26	0/0:4,0:2:6.01:0,6,62	0/0:12,0:6:2.94:0,3,18	1/1:4,9:18:6.02:357,6,0	0/0:17,0:16:42.80:0,43,819	0/0:19,0:19:45.14:0,45,1056	1/1:22,0:20:44.50:685,45,0	1/1:15,0:12:18.06:371,18,0	0/0:19,0:19:51.28:0,51,1259	0/0:15,0:15:36.11:0,36,881	0/0:21,0:20:24.54:0,25,1204	1/1:10,0:10:18.04:352,18,0	1/1:7,8:19:5.61:228,6,0	1/1:1,6:7:3.01:189,3,0	1/1:2,6:12:8.70:398,9,0	1/1:18,0:18:39.12:732,39,0	0/0:20,0:21:29.13:0,29,1071	1/1:12,0:8:20.98:312,21,0	1/1:3,0:14:3.01:51,3,0	1/1:12,0:12:5.33:128,5,0	1/1:26,0:24:17.40:288,17,0	0/0:18,0:18:36.12:0,36,900	0/0:27,0:27:72.25:0,72,2200	0/0:25,0:25:52.56:0,53,1255	0/0:17,0:16:37.77:0,38,662	1/1:11,1:11:33.07:1035,33,0	0/0:4,0:4:12.04:0,12,261
chr10	38260607	.	AAGTGCCGCCCTCTCAGAGGTC	A	15951.41	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=13.182;DP=520;FS=6.324;HRun=0;HaplotypeScore=305.8427;InbreedingCoeff=0.9163;MQ=81.02;MQ0=0;MQRankSum=-12.253;QD=55.39;ReadPosRankSum=4.668;VQSLOD=2.8409;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,15:34:31.35:1603,31,0	1/1:4,4:8:9.03:503,9,0	0/0:24,0:24:26.29:0,26,723	0/0:18,0:18:18.06:0,18,801	1/1:5,4:9:12:523,12,0	1/1:5,8:13:12.04:670,12,0	1/1:9,8:17:9.03:503,9,0	0/0:21,0:21:33.11:0,33,2031	1/1:14,8:22:18.06:1005,18,0	1/1:10,4:14:12.03:529,12,0	1/1:8,3:11:9.03:503,9,0	0/0:24,0:24:54.19:0,54,4590	1/1:10,11:21:25.33:1505,25,0	1/1:12,12:24:27.09:1508,27,0	1/1:13,9:22:21.07:1173,21,0	1/1:11,15:26:39.13:2179,39,0	1/1:15,6:21:15.05:792,15,0	1/1:6,7:13:15.05:828,15,0	0/0:20,0:20:39.13:0,39,2932	0/0:9,0:9:27.09:0,27,2192	0/0:48,0:48:99:0,102,7892	1/1:4,6:10:18.02:787,18,0	0/0:11,0:11:24.08:0,24,1897	0/0:40,0:40:87.28:0,87,6977	1/1:3,3:6:6.02:335,6,0	1/1:5,4:9:12.04:670,12,0	0/0:17,0:17:33.11:0,33,2923	1/1:6,2:8:6.02:335,6,0
chr10	38261937	.	CTG	C	575.42	PASS	AB=1.000;AC=24;AF=0.480;AN=50;BaseQRankSum=3.725;DP=611;FS=0.865;HRun=0;HaplotypeScore=133.9464;InbreedingCoeff=-0.0002;MQ=57.40;MQ0=13;MQRankSum=-0.565;QD=1.61;ReadPosRankSum=-1.003;VQSLOD=2.5489;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:40,0:37:5.61:34,6,0	0/1:11,0:11:3.93:4,0,20	./.	./.	0/0:22,0:22:3.67:0,4,45	0/1:19,0:18:24.36:24,0,75	0/1:24,0:24:16.48:16,0,20	0/0:32,0:32:7.07:0,7,29	0/1:18,0:18:8.06:8,0,18	0/1:25,0:24:10.09:10,0,69	1/1:17,1:18:2.36:8,2,0	1/1:17,6:22:9.02:97,9,0	0/1:27,0:26:20.71:24,0,21	0/0:22,0:22:0.08:0,0,18	0/1:24,0:24:19.67:20,0,31	0/0:16,0:16:12.41:0,12,96	0/0:31,0:30:7.22:0,7,52	0/1:25,0:25:46.38:54,0,46	1/1:16,0:16:2.09:16,2,0	1/1:12,0:10:5.98:48,6,0	./.	0/0:16,0:15:8.55:0,9,64	1/1:12,0:12:2.97:23,3,0	1/1:20,19:42:32.68:301,33,0	0/0:13,0:13:3.46:0,3,24	0/0:25,0:23:8.99:0,9,76	0/1:17,0:17:34.24:34,0,46	0/1:4,0:4:4.71:5,0,17
chr10	38261984	.	TGCGCGC	T	3118.41	PASS	AB=0.819;AC=27;AF=0.519;AN=52;BaseQRankSum=8.519;DP=457;FS=21.072;HRun=0;HaplotypeScore=188.8768;InbreedingCoeff=-0.0130;MQ=37.50;MQ0=19;MQRankSum=-6.968;QD=8.81;ReadPosRankSum=4.794;VQSLOD=1.2390;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:18,8:25:5.80:38,6,0	0/0:4,0:4:2.97:0,3,20	./.	./.	0/1:12,8:21:15.56:33,0,16	0/1:28,0:27:56.86:167,0,57	0/1:21,0:21:18.18:48,0,18	1/1:7,2:7:10.19:157,10,0	1/1:5,5:13:12.04:186,12,0	0/1:13,0:14:22.04:193,0,22	0/0:8,0:9:2.98:0,3,24	0/0:15,0:14:23.56:0,24,461	1/1:12,8:25:6.79:321,7,0	0/1:13,10:22:10.45:118,0,10	1/1:11,5:17:1.15:57,1,0	1/1:6,7:14:17.79:164,18,0	0/1:19,5:24:22.11:190,0,22	0/1:27,0:28:80.55:278,0,81	1/1:7,5:9:17.90:365,18,0	0/0:4,8:10:0.47:0,0,1	0/0:18,1:12:0.47:0,0,1	0/1:9,12:19:22.85:37,0,23	0/0:11,0:11:24.02:0,24,381	0/0:32,0:32:34.26:0,34,748	0/1:11,0:12:5.84:6,0,18	1/1:21,0:19:9.18:562,9,0	0/1:12,6:17:38.52:320,0,39	0/1:1,0:2:17.77:36,0,18
chr10	38261986	.	C	CGT	372.07	PASS	AB=0.981;AC=24;AF=0.480;AN=50;BaseQRankSum=2.824;DP=436;FS=15.191;HRun=0;HaplotypeScore=186.5244;InbreedingCoeff=0.3552;MQ=37.38;MQ0=18;MQRankSum=-4.402;QD=1.43;ReadPosRankSum=-1.007;VQSLOD=1.7910;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:23:2:7,2,0	0/0:3,0:3:3:0,3,25	./.	./.	1/1:20,1:20:5.96:45,6,0	0/0:28,0:27:10.28:0,10,61	0/0:21,0:20:0.20:0,0,0	1/1:9,0:7:17.52:92,18,0	1/1:12,1:12:2.73:8,3,0	0/1:12,0:12:6.54:7,0,15	0/1:8,0:8:0.02:0,0,0	0/0:14,0:13:23.91:0,24,301	0/1:23,0:23:12.99:69,0,13	1/1:23,0:21:3.86:23,4,0	1/1:15,1:16:8.85:61,9,0	1/1:13,1:14:3.53:26,4,0	0/1:21,3:23:5.74:50,0,6	0/1:27,0:27:25.92:26,0,63	1/1:10,0:8:4.37:11,4,0	./.	0/1:18,0:11:0:0,0,0	1/1:19,0:17:8.84:97,9,0	0/0:14,0:14:24.52:0,25,285	0/0:31,0:31:48.12:0,48,620	0/0:12,0:12:2.04:0,2,6	0/0:21,0:19:4.51:0,5,27	0/0:17,0:16:3.73:0,4,24	0/0:2,0:2:4.76:0,5,22
chr10	38261992	.	TGCGTGCGTGCGTGCGC	T	8868.42	PASS	AB=1.000;AC=39;AF=0.848;AN=46;BaseQRankSum=8.721;DP=392;FS=17.664;HRun=0;HaplotypeScore=195.0626;InbreedingCoeff=0.5639;MQ=37.00;MQ0=15;MQRankSum=-7.909;QD=28.61;ReadPosRankSum=2.047;VQSLOD=2.9912;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:23:4.26:102,4,0	./.	./.	./.	1/1:18,0:17:3.01:104,3,0	1/1:4,18:21:12.04:529,12,0	1/1:5,10:14:2.87:125,3,0	1/1:10,0:8:21.06:552,21,0	1/1:15,0:14:18.06:528,18,0	1/1:0,8:8:18.04:569,18,0	./.	0/0:14,0:13:30.09:0,30,1380	1/1:19,0:19:26.69:826,27,0	1/1:19,0:17:9.03:276,9,0	1/1:7,9:16:3.01:106,3,0	0/1:13,0:13:0.54:136,0,1	1/1:24,0:23:18.06:521,18,0	1/1:3,18:21:17.92:816,18,0	1/1:10,0:9:24.08:827,24,0	./.	1/1:14,0:11:0.94:2,1,0	1/1:20,0:18:2.59:89,3,0	0/0:19,0:19:48.16:0,48,1984	0/0:27,0:27:54.17:0,54,2709	1/1:2,7:9:3.01:86,3,0	1/1:4,14:16:45.15:1573,45,0	1/1:14,0:13:27.09:971,27,0	1/1:0,1:1:3.01:130,3,0
chr10	38261994	.	CGT	C	554.45	PASS	AB=0.938;AC=29;AF=0.604;AN=48;BaseQRankSum=9.134;DP=363;FS=13.070;HRun=0;HaplotypeScore=165.5192;InbreedingCoeff=0.1268;MQ=40.22;MQ0=14;MQRankSum=-5.953;QD=2.04;ReadPosRankSum=5.856;VQSLOD=1.2014;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:19,2:20:2.39:15,2,0	./.	./.	./.	1/1:14,2:15:2.97:20,3,0	1/1:20,0:19:10.67:49,11,0	1/1:11,0:11:1.90:6,2,0	0/1:9,0:8:21.87:22,0,81	0/1:9,4:13:23.39:29,0,23	0/1:8,0:8:1.19:19,0,1	./.	0/0:14,0:13:27.09:0,27,488	1/1:11,5:16:19.27:114,19,0	0/1:18,1:17:0.02:24,0,0	1/1:15,1:16:2.98:21,3,0	1/1:11,1:12:1.44:18,1,0	0/1:19,1:20:28.70:29,0,38	1/1:19,0:19:16.99:85,17,0	0/1:9,0:8:20.89:78,0,21	0/0:10,0:10:3:0,3,25	0/1:14,0:11:0.01:0,0,0	1/1:18,0:17:3.50:11,4,0	0/0:19,0:19:48.16:0,48,917	0/0:30,0:30:60.12:0,60,969	0/0:7,0:7:0.89:0,1,2	0/1:17,0:15:1.64:52,0,2	0/1:9,3:11:11.91:88,0,12	1/1:1,0:1:2.84:14,3,0
chr10	38262000	.	TGCGTGCGC	T	4183.40	PASS	AB=0.976;AC=40;AF=0.800;AN=50;BaseQRankSum=10.061;DP=368;FS=28.174;HRun=0;HaplotypeScore=179.9107;InbreedingCoeff=0.5447;MQ=41.25;MQ0=8;MQRankSum=-7.473;QD=14.13;ReadPosRankSum=1.757;VQSLOD=1.2872;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:24,2:26:8.99:59,9,0	./.	0/0:5,0:3:0.80:0,1,21	./.	1/1:9,2:11:3.01:71,3,0	1/1:20,0:19:12.04:259,12,0	1/1:10,0:10:3.01:55,3,0	1/1:12,0:12:12.74:165,13,0	1/1:10,4:13:16.85:210,17,0	1/1:8,0:8:17.95:278,18,0	./.	0/0:14,0:14:33.09:0,33,898	1/1:14,5:19:19.39:487,19,0	1/1:18,1:18:14.46:172,14,0	1/1:15,1:16:3.01:72,3,0	1/1:10,1:11:10.65:90,11,0	0/1:19,1:20:2.25:226,0,2	1/1:19,0:19:18.06:398,18,0	1/1:10,0:9:23.92:383,24,0	0/1:11,0:11:0.99:1,0,13	1/1:17,0:13:0.79:2,1,0	1/1:18,0:17:3.78:51,4,0	0/0:18,0:18:48.16:0,48,1324	0/0:27,0:27:69.16:0,69,1688	1/1:7,0:7:3:28,3,0	1/1:15,0:15:41.44:648,41,0	1/1:9,3:11:25.89:454,26,0	1/1:1,0:1:3.01:72,3,0
chr10	38262002	.	CGT	C	3687.75	PASS	AB=1.000;AC=40;AF=0.800;AN=50;BaseQRankSum=9.890;DP=379;FS=28.557;HRun=0;HaplotypeScore=163.9938;InbreedingCoeff=0.5927;MQ=41.33;MQ0=7;MQRankSum=-7.979;QD=12.09;ReadPosRankSum=1.146;VQSLOD=1.5741;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:16,9:25:12.02:136,12,0	./.	0/0:5,0:3:0.90:0,1,37	./.	1/1:5,8:13:3.01:34,3,0	1/1:20,0:19:12.01:123,12,0	1/1:11,0:11:5.88:70,6,0	1/1:12,2:14:41.78:434,42,0	1/1:9,5:13:17.95:190,18,0	1/1:8,0:8:14.97:134,15,0	./.	0/0:14,0:14:33.11:0,33,594	1/1:12,7:19:39.05:460,39,0	1/1:9,10:18:18.03:208,18,0	1/1:11,5:16:3.01:34,3,0	1/1:5,6:11:9.50:112,9,0	1/1:15,5:20:24.04:305,24,0	0/1:20,0:20:2.12:136,0,2	1/1:5,5:9:26.89:321,27,0	1/1:3,8:11:6.02:65,6,0	1/1:17,2:15:2.74:35,3,0	1/1:7,12:19:8.79:109,9,0	0/0:20,0:20:51.16:0,51,931	0/0:27,0:27:51.16:0,51,1037	0/1:7,0:7:0:0,0,0	1/1:16,0:16:45.38:470,45,0	1/1:6,6:11:26.93:294,27,0	1/1:1,0:1:2.90:16,3,0
chr10	38262008	.	C	CGT	5125.42	PASS	AC=42;AF=0.808;AN=52;BaseQRankSum=8.373;DP=428;FS=30.546;HRun=0;HaplotypeScore=163.1412;InbreedingCoeff=0.6771;MQ=55.15;MQ0=1;MQRankSum=-7.934;QD=15.07;ReadPosRankSum=1.681;VQSLOD=3.1677;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:12,19:32:12:231,12,0	./.	0/0:8,0:6:2.70:0,3,45	0/0:5,0:4:5.99:0,6,64	1/1:11,5:16:2.99:23,3,0	1/1:18,0:18:11.73:103,12,0	1/1:10,1:11:6.02:89,6,0	1/1:3,14:17:48.16:890,48,0	1/1:10,6:16:15:214,15,0	1/1:8,0:8:17.87:172,18,0	./.	0/0:19,0:19:42.01:0,42,605	1/1:14,7:22:23.05:517,23,0	1/1:13,10:23:21.02:316,21,0	1/1:15,1:16:2.99:24,3,0	1/1:8,5:13:9.03:157,9,0	1/1:6,16:22:24.08:390,24,0	1/1:19,0:19:17.40:129,17,0	1/1:6,6:13:36.10:535,36,0	1/1:8,3:11:6.02:115,6,0	1/1:4,17:19:3.01:58,3,0	1/1:12,8:20:9.03:170,9,0	0/0:18,0:18:51.17:0,51,774	0/0:31,0:31:75.06:0,75,1021	1/1:8,0:8:2.97:20,3,0	1/1:14,2:16:42.43:597,42,0	1/1:9,5:15:26.87:347,27,0	1/1:2,0:2:4.80:27,5,0
chr10	38263358	.	AT	A	7821.29	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=17.228;DP=650;FS=0.636;HRun=9;HaplotypeScore=86.2905;InbreedingCoeff=0.9773;MQ=71.58;MQ0=1;MQRankSum=-0.838;QD=22.47;ReadPosRankSum=-1.238;VQSLOD=4.8629;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,32:34:87.05:796,87,0	0/0:12,0:12:33.10:0,33,381	0/0:22,0:20:3.44:0,3,239	0/0:13,0:12:25.81:0,26,238	1/1:5,28:33:77.61:680,78,0	0/0:20,0:20:51.14:0,51,580	0/0:23,0:23:69.20:0,69,796	1/1:9,27:36:80.99:729,81,0	1/1:2,21:23:51.01:467,51,0	0/0:37,0:37:96.28:0,96,1100	0/0:24,0:24:40.04:0,40,698	0/0:32,0:32:81.24:0,81,935	1/1:4,25:29:75.03:682,75,0	1/1:2,16:18:48.02:439,48,0	1/1:1,23:24:69.03:632,69,0	1/1:4,17:21:45.02:412,45,0	1/1:2,26:28:75.04:686,75,0	0/0:27,0:27:78.22:0,78,889	1/1:3,11:14:32.96:288,33,0	1/1:2,28:30:83.88:747,84,0	1/1:1,14:15:36.02:330,36,0	1/1:5,18:23:54.02:494,54,0	0/0:20,0:20:54.16:0,54,623	0/0:20,0:20:57.17:0,57,657	0/0:17,0:17:39.10:0,39,441	0/0:22,0:22:29.69:0,30,588	1/1:1,19:20:48.02:439,48,0	0/0:12,0:12:33.09:0,33,371
chr10	38264138	.	ACCC	A	9129.21	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-7.907;DP=483;FS=1.384;HRun=11;HaplotypeScore=82.5889;InbreedingCoeff=0.9655;MQ=75.70;MQ0=0;MQRankSum=-1.017;QD=30.43;ReadPosRankSum=6.669;VQSLOD=3.9468;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,26:29:72.21:942,72,0	0/0:2,0:3:6:0,6,68	0/0:14,0:18:30.04:0,30,447	0/0:22,0:19:38.82:0,39,575	1/1:2,30:32:72.23:946,72,0	0/0:4,0:17:28.12:0,28,210	0/0:6,0:24:49.38:0,49,364	1/1:5,22:27:63.17:813,63,0	1/1:1,12:13:27.08:352,27,0	0/0:3,0:12:26.95:0,27,238	0/0:12,0:14:20.96:0,21,172	0/0:10,0:10:18.06:0,18,329	1/1:1,16:17:45.14:591,45,0	1/1:0,13:13:30.10:394,30,0	1/1:1,18:19:42.13:547,42,0	1/1:1,20:21:60.19:784,60,0	1/1:3,39:42:96.19:1262,96,0	0/0:4,0:16:23.91:0,24,184	1/1:3,22:25:63.18:827,63,0	1/1:2,8:10:24.04:297,24,0	1/1:3,12:15:24.02:315,24,0	1/1:2,11:13:27.73:390,28,0	0/0:8,0:8:12.01:0,12,171	0/0:11,0:11:27.09:0,27,531	0/0:1,0:10:11.95:0,12,92	0/0:1,0:10:23.09:0,23,201	1/1:4,20:24:50.79:670,51,0	0/0:7,0:8:9.02:0,9,102
chr10	38266331	.	TGG	T	10633.14	PASS	AB=1.000;AC=47;AF=0.839;AN=56;BaseQRankSum=4.332;DP=512;FS=1.861;HRun=11;HaplotypeScore=106.1885;InbreedingCoeff=0.7866;MQ=66.11;MQ0=0;MQRankSum=-2.418;QD=22.39;ReadPosRankSum=4.091;VQSLOD=4.5287;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,29:31:57.07:606,57,0	1/1:1,9:10:20.98:223,21,0	0/0:11,0:8:0.33:0,0,78	0/1:7,0:6:2.22:26,0,2	1/1:5,14:19:32.97:350,33,0	1/1:0,12:12:33.08:351,33,0	1/1:6,17:23:51.04:543,51,0	1/1:8,11:19:32.79:344,33,0	1/1:3,17:20:10.53:470,11,0	1/1:4,26:31:74.62:760,75,0	1/1:4,22:26:57.03:585,57,0	0/0:11,0:11:27.05:0,27,332	1/1:2,27:29:71.99:752,72,0	1/1:3,22:25:57.11:606,57,0	1/1:4,20:24:57.04:592,57,0	1/1:6,19:25:47.92:510,48,0	1/1:4,21:25:60.04:638,60,0	1/1:3,15:18:33.03:351,33,0	1/1:7,8:15:23.71:247,24,0	1/1:2,16:18:42.10:447,42,0	1/1:2,14:16:26.92:273,27,0	1/1:3,10:13:26.95:273,27,0	0/0:5,0:6:5.51:0,6,55	0/0:8,0:9:14.53:0,15,173	1/1:2,14:16:42.11:447,42,0	1/1:8,16:24:50.96:539,51,0	1/1:3,17:19:39.06:415,39,0	1/1:0,9:9:27.07:287,27,0
chr10	38267602	.	TATAATAATAATA	T	9193.08	PASS	AC=44;AF=0.846;AN=52;BaseQRankSum=2.079;DP=257;FS=4.491;HRun=0;HaplotypeScore=100.6105;InbreedingCoeff=0.6373;MQ=56.55;MQ0=3;MQRankSum=-4.296;QD=41.79;ReadPosRankSum=0.307;VQSLOD=4.3512;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,4:9:12.04:362,12,0	1/1:3,3:6:9.03:316,9,0	./.	0/0:5,0:5:8.06:0,8,222	1/1:6,6:11:12.04:420,12,0	1/1:7,11:18:42.13:1280,42,0	./.	1/1:18,2:18:15.05:444,15,0	1/1:9,3:12:9.03:315,9,0	1/1:6,2:8:12.03:312,12,0	1/1:7,2:9:6.02:210,6,0	0/0:10,0:10:18.06:0,18,1060	1/1:2,1:3:3.01:85,3,0	1/1:5,1:6:9.02:175,9,0	1/1:4,5:9:18.05:551,18,0	1/1:7,5:12:24.08:701,24,0	1/1:11,6:17:24.08:762,24,0	1/1:6,2:8:12.04:421,12,0	1/1:4,3:7:8.99:230,9,0	1/1:5,3:8:9.03:316,9,0	1/1:7,1:8:6.02:151,6,0	1/1:5,2:7:6.02:210,6,0	0/0:5,0:5:3.01:0,3,146	0/0:2,0:2:3.01:0,3,173	1/1:4,10:14:33.11:1157,33,0	1/1:7,0:10:11.05:100,11,0	1/1:6,4:10:18.06:537,18,0	1/1:2,0:6:14.53:137,15,0
chr10	38267645	.	GTTA	G	5568.04	PASS	AB=0.538;AC=47;AF=0.870;AN=54;BaseQRankSum=2.458;DP=271;FS=11.245;HRun=0;HaplotypeScore=84.7195;InbreedingCoeff=0.5304;MQ=51.85;MQ0=2;MQRankSum=-0.304;QD=21.67;ReadPosRankSum=0.804;VQSLOD=4.0128;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,8:12:18.02:234,18,0	1/1:1,5:6:12.04:172,12,0	1/1:3,0:2:2.98:21,3,0	0/0:4,0:2:2.90:0,3,16	1/1:3,8:11:23.95:281,24,0	1/1:8,12:20:18.06:252,18,0	1/1:1,2:3:6.02:86,6,0	1/1:14,23:36:66.19:882,66,0	1/1:2,4:6:9.03:129,9,0	1/1:4,4:8:12.02:152,12,0	1/1:1,7:8:14.94:188,15,0	0/0:7,0:7:15.04:0,15,257	1/1:1,3:4:6.02:86,6,0	0/1:1,6:7:26.81:77,0,27	1/1:4,5:9:12:149,12,0	1/1:6,5:11:9.03:129,9,0	1/1:6,16:22:30.10:429,30,0	1/1:2,11:13:24.08:342,24,0	1/1:8,0:4:6.02:86,6,0	1/1:1,10:11:26.97:330,27,0	1/1:1,8:9:9.03:129,9,0	1/1:4,0:4:6.02:85,6,0	0/0:3,0:3:9.03:0,9,175	./.	1/1:6,13:19:39.13:558,39,0	1/1:2,7:9:21.07:300,21,0	1/1:4,4:7:9.03:129,9,0	1/1:1,8:9:24.08:344,24,0
chr10	38269383	.	TTCTCTCTCTC	T	591.25	PASS	AB=0.989;AC=17;AF=0.607;AN=28;BaseQRankSum=3.070;DP=394;FS=8.383;HRun=0;HaplotypeScore=121.7667;InbreedingCoeff=0.2984;MQ=59.56;MQ0=20;MQRankSum=-2.752;QD=4.16;ReadPosRankSum=-0.212;VQSLOD=1.7568;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:19,0:19:0:0,0,0	./.	./.	./.	./.	1/1:11,2:13:3.01:88,3,0	./.	./.	0/1:7,0:7:0:0,0,0	./.	./.	0/0:10,0:10:3.01:0,3,89	1/1:5,0:5:1.82:5,2,0	0/1:12,0:12:0:0,0,0	1/1:12,1:12:3.01:88,3,0	./.	./.	./.	./.	1/1:14,1:14:3.01:88,3,0	./.	0/1:9,0:8:0:0,0,0	0/0:13,1:14:2.84:0,3,14	0/0:11,0:15:12.01:0,12,169	1/1:16,2:18:9.03:246,9,0	0/1:16,1:15:67.50:82,0,68	1/1:12,1:12:3.01:88,3,0	./.
chr10	38269433	.	C	CTGTGGGTGTGGG	4529.13	PASS	AB=1.000;AC=37;AF=0.712;AN=52;BaseQRankSum=6.610;DP=265;FS=3.724;HRun=0;HaplotypeScore=85.6202;InbreedingCoeff=0.4440;MQ=48.41;MQ0=22;MQRankSum=-5.996;QD=30.40;ReadPosRankSum=-0.591;VQSLOD=3.3172;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:16,0:13:3.62:67,0,4	1/1:3,0:3:9.03:410,9,0	0/0:24,0:12:3.87:0,4,516	0/0:27,0:14:33.08:0,33,695	./.	1/1:4,0:4:9.03:373,9,0	1/1:13,0:11:3.01:114,3,0	1/1:10,0:7:7.17:178,7,0	1/1:6,0:4:0.96:9,1,0	1/1:7,0:6:15.02:730,15,0	1/1:8,0:6:6.02:170,6,0	0/0:13,0:13:33.11:0,33,1225	0/1:2,0:2:1.77:2,0,2	1/1:5,0:4:7.18:46,7,0	1/1:5,0:3:2.07:23,2,0	1/1:2,0:2:1.15:10,1,0	0/1:10,0:5:1.57:12,0,2	1/1:11,0:9:1.97:155,2,0	1/1:7,0:5:7.44:328,7,0	1/1:6,0:6:6.49:232,6,0	./.	1/1:1,0:1:0.47:1,0,0	0/0:15,0:15:0.24:0,0,1141	0/0:17,0:16:35.67:0,36,1307	1/1:9,0:9:23.73:715,24,0	1/1:11,0:10:21.90:700,22,0	1/1:7,4:12:6.25:256,6,0	0/0:3,0:1:0.89:0,1,2
chr10	38269438	.	T	TGTGGGTGTGGGTGTGG	29073.27	PASS	AC=44;AF=0.815;AN=54;BaseQRankSum=4.722;DP=424;FS=8.764;HRun=0;HaplotypeScore=203.1219;InbreedingCoeff=0.8880;MQ=47.83;MQ0=16;MQRankSum=-8.156;QD=94.09;ReadPosRankSum=-2.432;VQSLOD=3.3313;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:25:59.22:1844,59,0	1/1:6,0:6:18.06:929,18,0	0/0:25,0:13:9.29:0,9,689	0/0:33,0:20:16:0,16,1098	1/1:10,0:10:3:25,3,0	1/1:12,0:12:33.06:1252,33,0	1/1:2,12:14:6.02:367,6,0	1/1:18,0:23:63.15:2851,63,0	1/1:13,0:12:33.07:1451,33,0	1/1:13,0:12:33.08:2083,33,0	1/1:13,0:12:12.04:463,12,0	0/0:13,0:13:33.11:0,33,1511	1/1:9,0:9:26.08:1443,26,0	1/1:14,0:13:36.08:1753,36,0	1/1:11,0:9:27.09:1324,27,0	1/1:9,0:9:27.09:1554,27,0	1/1:20,0:17:42.06:2027,42,0	1/1:6,0:12:12.04:616,12,0	1/1:9,0:7:13.72:615,14,0	1/1:17,0:17:33.48:1004,33,0	./.	1/1:11,0:15:30.53:1584,31,0	0/0:15,0:15:40.02:0,40,1589	0/0:17,0:16:35.41:0,35,1646	1/1:11,0:11:33.11:1673,33,0	1/1:19,0:18:50.77:2684,51,0	1/1:20,0:19:29.59:1430,30,0	1/1:4,0:3:9:103,9,0
chr10	38270649	.	G	GA	7252.03	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-14.382;DP=529;FS=5.345;HRun=9;HaplotypeScore=48.2181;InbreedingCoeff=0.9944;MQ=78.15;MQ0=0;MQRankSum=-0.715;QD=26.56;ReadPosRankSum=0.205;VQSLOD=5.2623;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:77.94:0,78,672	1/1:0,8:8:24.06:266,24,0	0/0:18,0:17:26.29:0,26,212	0/0:12,0:11:14.98:0,15,130	0/0:26,0:26:62.96:0,63,543	1/1:2,13:15:36.10:398,36,0	1/1:4,12:16:24.06:266,24,0	1/1:6,19:25:17.59:606,18,0	0/0:16,0:17:38.02:0,38,319	1/1:5,29:34:87.22:954,87,0	1/1:0,19:19:51.14:564,51,0	0/0:14,0:14:38.99:0,39,338	0/0:18,0:18:47.98:0,48,416	0/0:15,0:16:41.03:0,41,345	0/0:19,0:19:53.98:0,54,469	0/0:17,0:17:41.98:0,42,364	0/0:21,0:21:56.96:0,57,490	1/1:0,16:16:45.12:498,45,0	1/1:3,11:14:33.09:365,33,0	1/1:1,21:22:60.16:664,60,0	1/1:0,11:11:27.07:299,27,0	0/0:9,0:9:17.99:0,18,156	0/0:23,0:23:56.98:0,57,495	0/0:16,0:16:47.99:0,48,417	1/1:4,23:27:63.17:697,63,0	1/1:3,25:28:49.15:770,49,0	1/1:4,20:24:37.66:608,38,0	1/1:4,10:14:27.07:299,27,0
chr10	38271289	.	A	AG	8126.31	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-13.957;DP=618;FS=4.274;HRun=7;HaplotypeScore=59.5779;InbreedingCoeff=0.9898;MQ=79.89;MQ0=0;MQRankSum=-2.342;QD=29.66;ReadPosRankSum=-2.082;VQSLOD=4.7647;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,108,1042	1/1:2,5:7:18.05:213,18,0	0/0:27,0:26:52.89:0,53,570	0/0:19,0:19:11.56:0,12,246	0/0:16,0:16:42.06:0,42,405	1/1:0,15:15:45.14:544,45,0	1/1:6,23:29:63.19:761,63,0	1/1:4,18:22:51.10:569,51,0	0/0:24,0:24:69.05:0,69,650	1/1:1,10:11:30.07:348,30,0	1/1:1,16:17:48.15:579,48,0	0/0:21,0:21:57.09:0,57,550	0/0:25,0:25:66.09:0,66,631	0/0:29,0:29:81.12:0,81,777	0/0:30,0:30:69.10:0,69,666	0/0:14,0:14:39.06:0,39,377	0/0:31,0:31:81.08:0,81,768	1/1:4,30:34:78.24:940,78,0	1/1:5,11:16:39.07:442,39,0	1/1:1,11:12:36.11:434,36,0	1/1:5,51:56:99:1629,135,0	0/0:14,0:14:36.04:0,36,342	0/0:13,0:13:33.05:0,33,319	0/0:42,0:42:99:0,105,992	1/1:0,14:14:36.11:435,36,0	1/1:0,16:16:48.15:579,48,0	1/1:1,19:20:42.13:507,42,0	1/1:0,5:5:12.04:145,12,0
chr10	38271968	.	CA	C	6042.95	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-8.407;DP=607;FS=11.491;HRun=11;HaplotypeScore=82.2202;InbreedingCoeff=0.9860;MQ=69.77;MQ0=0;MQRankSum=0.327;QD=19.18;ReadPosRankSum=-0.476;VQSLOD=4.8849;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:33:52.20:0,52,263	1/1:1,4:5:11.99:99,12,0	0/0:11,0:10:13.76:0,14,113	0/0:11,0:11:14.24:0,14,196	0/0:5,0:30:39.62:0,40,223	1/1:3,25:29:73.93:597,74,0	1/1:3,14:18:34.99:277,35,0	1/1:5,23:28:65.80:537,66,0	0/0:6,0:28:42.44:0,42,219	1/1:2,21:25:64:504,64,0	1/1:6,22:28:62.92:517,63,0	0/0:15,1:16:17.44:0,17,377	0/0:6,0:25:24.86:0,25,198	0/0:7,0:25:34.22:0,34,176	0/0:3,0:16:34.22:0,34,176	0/0:3,0:17:39.93:0,40,211	0/0:0,0:10:22.73:0,23,114	1/1:1,21:22:59.93:493,60,0	1/1:6,17:24:27.84:429,28,0	1/1:4,18:22:31.33:418,31,0	1/1:2,8:10:23.96:197,24,0	0/0:5,0:30:56.52:0,57,340	0/0:24,0:24:66.14:0,66,689	0/0:14,1:15:17.45:0,17,383	1/1:3,30:35:81.98:652,82,0	1/1:5,24:29:71.88:587,72,0	1/1:3,25:29:44.97:565,45,0	1/1:4,7:11:20.94:172,21,0
chr10	38273653	.	C	CT	25097.48	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-12.821;DP=728;FS=4.051;HRun=1;HaplotypeScore=66.7227;InbreedingCoeff=0.9910;MQ=86.33;MQ0=0;MQRankSum=-5.699;QD=41.41;ReadPosRankSum=2.865;VQSLOD=5.4801;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,46:47:99:1843,123,0	1/1:0,9:9:27.09:404,27,0	0/0:27,0:27:12.47:0,12,625	0/0:20,0:20:25.38:0,25,407	1/1:0,32:32:96.24:1389,96,0	1/1:0,31:31:84.28:1259,84,0	1/1:1,27:28:81.27:1214,81,0	1/1:2,29:31:87.29:1299,87,0	1/1:2,22:24:60.20:899,60,0	1/1:1,32:34:96.32:1431,96,0	1/1:0,26:26:69.19:1008,69,0	0/0:25,0:25:75.23:0,75,959	1/1:0,27:27:78.26:1169,78,0	1/1:2,32:34:87.07:1304,87,0	1/1:0,16:16:48.16:719,48,0	1/1:1,36:37:99:1529,102,0	1/1:1,26:26:78.26:1167,78,0	1/1:1,21:22:60.20:895,60,0	1/1:3,18:21:54.18:802,54,0	1/1:1,21:22:63.17:919,63,0	1/1:2,26:28:69.23:1034,69,0	1/1:0,20:21:60.20:899,60,0	0/0:24,0:24:69.21:0,69,882	0/0:26,0:26:72.23:0,72,935	1/1:0,18:18:54.18:810,54,0	1/1:0,26:26:75.25:1125,75,0	1/1:0,39:37:99:1709,114,0	1/1:0,6:6:18.06:270,18,0
chr10	38276770	.	ACCC	A	13198.41	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=2.372;DP=516;FS=21.764;HRun=11;HaplotypeScore=87.8617;InbreedingCoeff=0.9773;MQ=57.06;MQ0=3;MQRankSum=-1.446;QD=29.33;ReadPosRankSum=6.023;VQSLOD=2.0000;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,24:31:63.11:806,63,0	1/1:2,5:7:12:140,12,0	0/0:11,0:8:12:0,12,150	0/0:13,0:10:15.03:0,15,250	1/1:2,9:11:27.09:355,27,0	1/1:3,15:18:33.09:434,33,0	1/1:7,20:26:54.14:710,54,0	1/1:5,15:19:45.07:558,45,0	1/1:0,21:21:51.17:670,51,0	1/1:1,24:25:72.23:942,72,0	1/1:1,18:19:42.12:552,42,0	0/0:15,0:17:46.36:0,46,775	1/1:1,19:21:52.72:707,53,0	1/1:2,15:17:42.13:552,42,0	1/1:0,21:21:60.19:789,60,0	1/1:2,17:19:45.13:591,45,0	1/1:2,25:28:66.15:846,66,0	1/1:3,21:23:63.13:808,63,0	1/1:7,13:18:32.97:433,33,0	1/1:2,11:13:27.08:354,27,0	1/1:3,14:17:21.05:276,21,0	1/1:6,8:14:24.06:315,24,0	0/0:6,0:7:18.03:0,18,291	0/0:16,0:17:33.09:0,33,568	1/1:1,11:12:24.07:315,24,0	1/1:1,20:21:60.19:782,60,0	1/1:3,24:27:63.18:828,63,0	1/1:3,13:17:33.97:436,34,0
chr10	38280629	.	AT	A	711.13	PASS	AB=0.930;AC=26;AF=0.464;AN=56;BaseQRankSum=5.623;DP=273;FS=0.000;HRun=1;HaplotypeScore=57.5266;InbreedingCoeff=-0.3436;MQ=67.18;MQ0=2;MQRankSum=0.445;QD=3.23;ReadPosRankSum=6.847;VQSLOD=-0.4967;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:15,1:16:18.93:19,0,34	0/1:2,0:2:5.69:6,0,13	0/0:19,0:7:11.98:0,12,122	0/1:13,0:12:2.44:2,0,140	0/1:12,2:14:47.33:56,0,47	1/1:2,0:2:0:1,0,0	0/1:7,2:9:9.30:58,0,9	0/0:10,0:10:9.62:0,10,84	0/1:4,0:4:4.89:5,0,19	0/1:9,1:10:28.61:29,0,92	0/1:13,1:14:63.15:63,0,70	0/0:5,0:5:9.01:0,9,120	0/1:13,0:13:29.22:29,0,32	1/1:2,1:3:6.64:55,7,0	0/1:13,0:13:15.45:15,0,33	0/1:8,2:10:8.92:76,0,9	0/1:13,2:15:23.25:62,0,23	0/1:8,2:10:13.10:38,0,13	0/1:6,0:6:0.37:0,0,58	0/1:4,1:5:15.08:57,0,15	0/1:17,0:17:0.84:60,0,1	1/1:5,1:6:8.91:47,9,0	0/0:9,0:9:20.43:0,20,293	0/0:10,0:10:21.05:0,21,298	0/1:8,1:9:11.77:66,0,12	0/1:8,1:9:54.37:54,0,61	0/1:14,1:15:24.48:59,0,24	0/1:4,0:4:5.25:5,0,16
chr10	38280630	.	TG	T	3611.38	PASS	AB=0.752;AC=44;AF=0.786;AN=56;BaseQRankSum=3.045;DP=303;FS=14.200;HRun=9;HaplotypeScore=60.5241;InbreedingCoeff=0.4904;MQ=66.45;MQ0=2;MQRankSum=-1.666;QD=13.84;ReadPosRankSum=3.206;VQSLOD=2.0079;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,11:15:0.18:168,0,0	1/1:1,1:2:3:27,3,0	0/0:18,0:7:6.02:0,6,69	0/1:14,1:12:7.79:8,0,72	1/1:4,10:14:19.84:190,20,0	1/1:3,0:3:5.98:50,6,0	1/1:5,5:10:14.99:136,15,0	1/1:5,6:11:11.91:96,12,0	0/1:7,2:9:18.61:21,0,19	1/1:5,5:10:11.98:109,12,0	0/1:6,8:14:1.61:241,0,2	0/0:5,0:5:11.99:0,12,116	0/1:6,10:16:1.39:168,0,1	1/1:5,1:6:8.96:76,9,0	1/1:5,11:16:29.99:275,30,0	1/1:7,7:14:23.93:204,24,0	1/1:10,10:20:35.95:323,36,0	1/1:5,7:12:20.56:191,21,0	1/1:1,3:5:11.04:88,11,0	1/1:3,2:5:8.99:79,9,0	1/1:5,13:18:39:357,39,0	1/1:1,5:6:15.01:137,15,0	0/0:9,0:9:24.03:0,24,255	0/0:10,0:10:27.03:0,27,275	1/1:2,7:9:17.93:155,18,0	1/1:4,5:9:18:164,18,0	1/1:7,11:18:32.77:294,33,0	1/1:1,3:4:6:55,6,0
chr10	38285005	.	TATGTCTAATGAAGCACACAG	T	30762.16	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=18.529;DP=681;FS=5.598;HRun=0;HaplotypeScore=373.4232;InbreedingCoeff=0.9591;MQ=85.92;MQ0=0;MQRankSum=-17.763;QD=92.38;ReadPosRankSum=5.105;VQSLOD=3.6911;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,138,12466	1/1:2,3:5:3.01:169,3,0	0/0:31,0:31:84.29:0,84,5945	0/0:24,0:24:60.17:0,60,3873	0/0:26,0:26:77.48:0,77,6449	1/1:5,13:18:33.11:1833,33,0	1/1:9,23:32:57.19:2922,57,0	1/1:14,10:24:33.10:1468,33,0	0/0:24,0:24:72.23:0,72,6068	1/1:3,20:23:60.21:3148,60,0	1/1:2,12:14:36.12:1808,36,0	1/1:9,23:32:60.21:3312,60,0	0/0:23,0:23:69.24:0,69,5621	0/0:31,0:31:81.23:0,81,6812	0/0:33,0:33:93.32:0,93,7680	0/0:34,0:34:99:0,102,8483	0/0:47,0:47:99:0,141,12072	1/1:5,12:17:30.10:1549,30,0	1/1:7,6:13:18.06:929,18,0	1/1:3,17:18:42.14:2077,42,0	1/1:20,9:29:8.12:373,8,0	0/0:28,0:28:84.29:0,84,6756	1/1:1,15:16:39.13:2055,39,0	1/1:3,13:16:21.02:1042,21,0	1/1:3,19:21:39.61:2110,40,0	1/1:3,18:21:54.16:2762,54,0	1/1:9,17:26:45.15:2531,45,0	1/1:1,4:5:12.04:674,12,0
chr10	38286073	.	CA	C	2412.81	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=11.567;DP=444;FS=16.004;HRun=9;HaplotypeScore=50.2025;InbreedingCoeff=0.9180;MQ=75.62;MQ0=0;MQRankSum=-0.767;QD=17.87;ReadPosRankSum=2.783;VQSLOD=2.3488;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:66.18:0,66,752	0/0:7,0:7:18.05:0,18,208	0/0:18,0:10:14.60:0,15,88	0/1:19,0:14:8.80:9,0,93	1/1:0,20:20:60.03:549,60,0	0/0:20,1:21:32.70:0,33,622	0/0:13,0:13:30.09:0,30,346	0/0:26,0:26:57.15:0,57,641	1/1:1,16:17:47.82:425,48,0	0/0:17,0:16:48.14:0,48,547	0/0:9,0:9:24.07:0,24,277	0/0:12,0:12:33.10:0,33,381	1/1:0,11:11:30.02:275,30,0	1/1:2,12:14:32.96:302,33,0	1/1:1,12:13:26.80:237,27,0	1/1:5,13:18:39.02:357,39,0	1/1:2,13:15:32.96:292,33,0	0/0:19,0:19:54.16:0,54,623	0/0:12,0:12:36.03:0,36,379	0/0:19,0:19:51.14:0,51,578	0/0:9,0:9:27.06:0,27,300	1/1:1,7:8:20.92:176,21,0	0/0:20,0:20:54.16:0,54,623	0/0:7,0:7:18.05:0,18,208	0/0:25,0:25:72.21:0,72,831	0/0:24,0:24:72.17:0,72,803	0/0:17,0:17:39.10:0,39,440	0/0:10,0:10:30.06:0,30,324
chr10	38286247	.	T	TCA	26952.19	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-4.973;DP=530;FS=1.837;HRun=0;HaplotypeScore=75.3962;InbreedingCoeff=0.9818;MQ=75.18;MQ0=0;MQRankSum=-5.519;QD=53.69;ReadPosRankSum=6.313;VQSLOD=5.7000;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,33:34:87.30:1767,87,0	1/1:0,4:4:12.04:244,12,0	0/0:13,0:13:35.68:0,36,516	0/0:15,0:14:29.49:0,29,375	1/1:0,15:17:45.15:914,45,0	1/1:1,16:17:48.16:975,48,0	1/1:0,20:23:57.20:1158,57,0	1/1:0,23:23:66.23:1320,66,0	1/1:0,18:18:45.15:914,45,0	1/1:2,11:13:33.11:646,33,0	1/1:0,12:13:36.12:731,36,0	1/1:0,20:20:57.15:1117,57,0	1/1:1,11:12:33.11:647,33,0	1/1:0,22:22:63.22:1280,63,0	1/1:2,16:20:45.15:914,45,0	1/1:0,25:25:66.23:1341,66,0	1/1:1,39:40:99:2255,111,0	1/1:2,25:29:72.25:1463,72,0	1/1:3,16:20:57.17:1116,57,0	1/1:0,14:15:39.13:792,39,0	1/1:1,29:32:81.28:1620,81,0	1/1:1,14:15:33.11:670,33,0	1/1:0,11:11:27.09:549,27,0	1/1:1,21:23:63.22:1280,63,0	1/1:1,16:17:48.16:975,48,0	1/1:0,18:19:57.18:1123,57,0	1/1:0,11:12:33.06:654,33,0	1/1:0,8:8:24.08:488,24,0
chr10	38288118	.	TGA	T	9940.59	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-1.009;DP=498;FS=29.442;HRun=0;HaplotypeScore=120.4608;InbreedingCoeff=0.8480;MQ=61.42;MQ0=2;MQRankSum=-1.577;QD=21.02;ReadPosRankSum=4.625;VQSLOD=3.3893;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,18:23:38.66:495,39,0	1/1:0,2:2:6.02:76,6,0	0/0:14,0:10:12.17:0,12,153	0/0:11,0:9:11.16:0,11,134	1/1:5,6:11:20.68:248,21,0	1/1:0,12:12:27.09:344,27,0	1/1:11,21:31:50.77:645,51,0	1/1:6,14:20:38.58:452,39,0	1/1:8,7:15:27.08:330,27,0	1/1:6,10:16:30.04:359,30,0	1/1:2,11:13:20.28:247,20,0	1/1:10,19:29:51:601,51,0	1/1:8,11:19:42.07:482,42,0	1/1:5,13:18:36.08:456,36,0	1/1:11,18:30:62.87:722,63,0	1/1:9,7:16:24.03:290,24,0	1/1:13,9:20:29.98:332,30,0	1/1:4,7:11:18.06:229,18,0	1/1:3,10:13:30.10:379,30,0	1/1:4,9:13:24.02:286,24,0	1/1:7,40:47:69.08:878,69,0	1/1:11,11:21:20.88:251,21,0	1/1:4,12:15:21.01:248,21,0	1/1:5,16:21:39.12:497,39,0	1/1:1,9:10:18.06:229,18,0	1/1:6,13:19:36.06:396,36,0	1/1:5,15:20:33.11:420,33,0	1/1:3,0:3:5.99:47,6,0
chr10	38288140	.	GT	G	2676.47	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=2.577;DP=531;FS=1.466;HRun=1;HaplotypeScore=151.5959;InbreedingCoeff=0.9407;MQ=66.43;MQ0=2;MQRankSum=-9.308;QD=15.12;ReadPosRankSum=-3.086;VQSLOD=2.6086;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:56.82:0,57,702	0/0:3,0:3:0.22:0,0,0	0/0:16,1:14:31.42:0,31,380	0/0:14,0:14:29.69:0,30,316	1/1:2,9:11:17.92:168,18,0	0/0:20,0:20:49.80:0,50,350	0/0:30,0:29:46.29:0,46,388	0/0:23,0:23:10.70:0,11,141	1/1:0,17:17:33.07:332,33,0	0/0:17,0:17:25.38:0,25,237	0/0:12,0:12:20.61:0,21,162	0/0:24,0:24:43.73:0,44,345	1/1:0,24:24:54.01:514,54,0	1/1:3,22:25:33.01:320,33,0	1/1:4,32:36:54.55:537,55,0	1/1:2,19:21:33.54:341,34,0	1/1:6,19:25:36.07:366,36,0	0/0:11,0:11:28.03:0,28,183	0/0:16,0:16:32.22:0,32,207	0/0:13,0:13:13.37:0,13,165	0/0:47,0:47:85.32:0,85,560	1/1:2,16:17:30.06:302,30,0	0/0:17,0:16:29.49:0,29,190	0/0:21,0:21:52.75:0,53,344	0/0:10,0:10:26.62:0,27,191	0/0:10,0:10:23.36:0,23,171	0/0:21,0:21:55.87:0,56,381	0/0:3,0:3:5.64:0,6,30
chr10	38289168	.	GCA	G	3159.67	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-1.291;DP=786;FS=13.050;HRun=0;HaplotypeScore=149.4961;InbreedingCoeff=0.9992;MQ=82.47;MQ0=0;MQRankSum=-0.947;QD=36.74;ReadPosRankSum=2.449;VQSLOD=4.3381;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:67,0:67:99:0,196,3754	0/0:10,0:10:27.53:0,28,282	0/0:18,0:18:48.16:0,48,888	0/0:28,0:28:73.11:0,73,1258	0/0:28,0:28:84.29:0,84,1622	0/0:19,0:19:51.13:0,51,565	0/0:47,0:47:99:0,141,1473	0/0:28,0:28:66.17:0,66,755	0/0:36,0:36:99:0,105,2016	0/0:26,0:26:77.99:0,78,780	0/0:15,0:15:39.05:0,39,386	1/1:2,29:31:84.29:1283,84,0	0/0:30,0:30:90.29:0,90,1672	0/0:33,0:33:99:0,99,1882	0/0:34,0:33:99:0,102,1960	0/0:35,0:35:99:0,105,2028	0/0:27,0:27:81.28:0,81,1564	0/0:23,0:23:62.61:0,63,701	0/0:19,0:19:51.13:0,51,601	0/0:15,0:15:30.08:0,30,347	0/0:47,0:47:99:0,132,1375	0/0:28,0:28:84.29:0,84,1613	1/1:0,22:22:63.21:964,63,0	1/1:2,31:33:69.23:1056,69,0	0/0:31,0:31:84.18:0,84,878	0/0:25,0:25:68.59:0,69,742	0/0:21,0:21:57.12:0,57,627	0/0:10,0:10:28.62:0,29,311
chr10	38289252	.	TCATGTCTCG	T	26852.68	PASS	AB=0.600;AC=33;AF=0.589;AN=56;BaseQRankSum=18.909;DP=724;FS=8.227;HRun=0;HaplotypeScore=224.7916;InbreedingCoeff=0.9212;MQ=80.70;MQ0=0;MQRankSum=-19.400;QD=71.99;ReadPosRankSum=3.256;VQSLOD=3.5969;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,114,5164	1/1:0,7:7:17.93:558,18,0	0/0:26,0:26:69.24:0,69,2880	0/0:24,0:24:66.20:0,66,2685	0/0:21,0:21:63.22:0,63,3005	1/1:1,19:20:48.16:1488,48,0	1/1:3,32:35:63.22:1954,63,0	1/1:2,33:35:99:2822,99,0	0/0:39,0:39:99:0,111,5294	1/1:0,29:29:84.28:2417,84,0	1/1:0,17:17:45.15:1395,45,0	1/1:2,30:32:78.27:2419,78,0	0/0:34,0:34:99:0,99,4748	0/0:36,0:36:99:0,99,4555	0/0:27,0:27:81.28:0,81,3682	0/0:37,0:37:99:0,102,4597	0/0:31,0:31:93.32:0,93,4436	0/1:4,8:12:99:537,0,126	1/1:2,21:23:66.17:1817,66,0	1/1:3,21:24:60.21:1860,60,0	1/1:3,12:15:18.06:535,18,0	0/0:37,0:37:99:0,102,4889	1/1:3,14:17:45.15:1303,45,0	1/1:7,13:20:21.46:652,21,0	1/1:1,22:23:60.21:1861,60,0	1/1:4,29:33:87.28:2630,87,0	1/1:3,23:26:69.24:2139,69,0	1/1:0,5:5:15.05:465,15,0
chr10	38289954	.	ACT	A	2590.41	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=10.195;DP=659;FS=2.423;HRun=0;HaplotypeScore=112.2384;InbreedingCoeff=0.9997;MQ=70.21;MQ0=0;MQRankSum=-1.351;QD=39.85;ReadPosRankSum=3.155;VQSLOD=5.7705;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,129,2491	0/0:11,0:11:33.11:0,33,670	0/0:15,0:15:45.13:0,45,777	0/0:23,0:23:69.21:0,69,1284	0/0:28,0:28:84.29:0,84,1635	0/0:16,0:16:45.15:0,45,902	0/0:29,0:29:84.24:0,84,1596	0/0:27,0:27:78.25:0,78,1496	0/0:16,0:16:48.16:0,48,936	0/0:23,0:23:69.23:0,69,1359	0/0:23,0:23:66.23:0,66,1314	1/1:0,26:26:69.24:1121,69,0	0/0:31,0:31:93.31:0,93,1840	0/0:20,0:20:60.18:0,60,1169	0/0:23,0:23:69.18:0,69,1244	0/0:29,0:29:84.27:0,84,1669	0/0:35,0:35:99:0,102,2018	0/0:29,0:29:87.26:0,87,1710	0/0:25,0:25:75.26:0,75,1500	0/0:21,0:21:60.18:0,60,1101	0/0:27,0:27:81.22:0,81,1532	0/0:19,0:19:57.18:0,57,1097	1/1:0,15:15:35.92:586,36,0	1/1:0,24:24:63.22:1026,63,0	0/0:25,0:25:75.26:0,75,1493	0/0:20,0:20:57.20:0,57,1143	0/0:25,0:25:75.26:0,75,1504	0/0:10,0:10:30.10:0,30,609
chr10	38290102	.	TG	T	3925.99	PASS	AC=16;AF=0.296;AN=54;BaseQRankSum=0.517;DP=488;FS=14.172;HRun=9;HaplotypeScore=101.8551;InbreedingCoeff=0.8790;MQ=65.66;MQ0=0;MQRankSum=3.533;QD=22.83;ReadPosRankSum=4.883;VQSLOD=2.7756;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,102,1177	./.	0/0:12,0:11:1.56:0,2,205	0/0:6,0:6:9.01:0,9,100	1/1:1,28:29:69.03:631,69,0	0/0:14,0:18:11.43:0,11,77	0/0:18,0:28:28.24:0,28,161	0/0:24,0:25:21.26:0,21,154	1/1:2,19:21:54.03:494,54,0	0/0:11,0:17:11.53:0,12,64	0/0:7,0:10:11.61:0,12,74	0/0:16,0:16:42.11:0,42,474	1/1:0,16:16:48.03:439,48,0	1/1:3,29:32:75.03:686,75,0	1/1:2,16:18:48.03:439,48,0	1/1:3,18:21:54.02:494,54,0	1/1:1,18:19:39.02:357,39,0	0/0:15,0:20:29.26:0,29,185	0/0:6,0:12:21.30:0,21,124	0/0:5,0:10:5.59:0,6,26	0/0:11,0:12:13.34:0,13,68	1/1:2,14:16:42.01:384,42,0	0/0:15,0:15:36.11:0,36,415	0/0:13,0:13:36.09:0,36,406	0/0:9,0:17:11.40:0,11,58	0/0:13,0:16:8.78:0,9,55	0/0:11,0:19:14.74:0,15,97	0/0:5,0:8:5.68:0,6,29
chr10	38292924	.	C	CT	26070.01	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-14.876;DP=746;FS=2.637;HRun=1;HaplotypeScore=65.0765;InbreedingCoeff=0.9998;MQ=88.69;MQ0=0;MQRankSum=-9.439;QD=41.71;ReadPosRankSum=5.056;VQSLOD=5.2032;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,38:39:99:1695,114,0	1/1:1,10:11:27.09:405,27,0	0/0:28,0:28:84.22:0,84,1024	0/0:26,0:25:69.14:0,69,841	1/1:0,27:27:78.26:1168,78,0	1/1:0,23:23:60.20:899,60,0	1/1:0,21:21:57.19:854,57,0	1/1:2,34:36:99:1465,102,0	1/1:0,34:34:93.32:1394,93,0	1/1:0,22:22:66.22:989,66,0	1/1:0,19:19:54.18:809,54,0	0/0:20,0:20:57.17:0,57,725	1/1:1,32:33:90.30:1342,90,0	1/1:0,32:32:93.32:1394,93,0	1/1:1,42:43:99:1841,123,0	1/1:0,26:26:66.22:989,66,0	1/1:1,22:22:66.22:989,66,0	1/1:0,15:15:42.14:629,42,0	1/1:3,23:26:72.24:1079,72,0	1/1:1,33:34:93.17:1317,93,0	1/1:0,39:39:99:1574,105,0	1/1:0,20:20:54.18:808,54,0	0/0:22,0:22:66.21:0,66,857	0/0:25,0:25:75.23:0,75,959	1/1:0,25:25:75.25:1124,75,0	1/1:0,30:30:90.29:1326,90,0	1/1:1,28:29:78.26:1169,78,0	1/1:0,18:18:54.18:809,54,0
chr10	38293603	.	GT	G	8980.68	PASS	AB=0.955;AC=54;AF=0.964;AN=56;BaseQRankSum=-1.652;DP=584;FS=0.000;HRun=11;HaplotypeScore=71.2217;InbreedingCoeff=0.2593;MQ=72.92;MQ0=1;MQRankSum=0.516;QD=15.38;ReadPosRankSum=2.195;VQSLOD=5.4255;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,45:51:58.98:902,59,0	1/1:2,6:8:14.96:123,15,0	0/1:23,0:16:3.39:3,0,82	0/1:9,1:9:13.58:14,0,33	1/1:1,16:18:49.87:392,50,0	1/1:6,15:21:41.93:344,42,0	1/1:2,16:18:38.95:320,39,0	1/1:10,20:29:59.82:481,60,0	1/1:2,17:19:47.77:394,48,0	1/1:2,13:15:38.88:312,39,0	1/1:5,21:27:27.07:417,27,0	1/1:5,0:25:36.65:106,37,0	1/1:4,8:13:23:178,23,0	1/1:0,11:11:32.96:271,33,0	1/1:3,17:20:51.82:420,52,0	1/1:5,17:22:18.52:362,19,0	1/1:7,26:33:16.93:552,17,0	1/1:6,28:34:77.49:626,77,0	1/1:5,12:18:37.94:296,38,0	1/1:4,13:18:43.94:343,44,0	1/1:2,13:15:23.97:197,24,0	1/1:5,14:19:35.90:295,36,0	1/1:2,0:16:31.49:103,31,0	1/1:1,0:23:44.81:129,45,0	1/1:0,13:13:38.96:320,39,0	1/1:5,20:25:42.28:439,42,0	1/1:3,24:27:56.89:468,57,0	1/1:2,9:11:20.97:172,21,0
chr10	38294052	.	G	GC	20423.84	PASS	AB=0.677;AC=25;AF=0.446;AN=56;BaseQRankSum=-1.281;DP=1164;FS=13.738;HRun=0;HaplotypeScore=264.7034;InbreedingCoeff=-0.8082;MQ=62.69;MQ0=0;MQRankSum=-9.984;QD=18.37;ReadPosRankSum=-2.303;VQSLOD=1.6853;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:29,24:53:99:948,0,834	0/1:15,14:29:99:530,0,542	0/0:16,0:16:40.97:0,41,404	0/0:31,0:30:54.87:0,55,603	0/1:22,20:42:99:524,0,541	0/1:18,20:38:99:658,0,622	0/1:25,36:61:99:1272,0,709	0/1:29,39:68:99:1604,0,808	0/1:22,12:34:99:422,0,723	0/1:24,32:56:99:1328,0,833	0/1:15,24:39:99:654,0,438	0/1:21,21:42:99:826,0,717	0/1:21,17:38:99:746,0,597	0/1:20,14:34:99:510,0,657	0/1:34,19:53:99:767,0,1101	0/1:26,17:43:99:774,0,832	0/1:14,7:20:99:140,0,466	0/1:15,22:37:99:895,0,458	0/1:33,27:61:99:1138,0,885	0/1:20,21:41:99:778,0,676	0/1:21,20:41:99:613,0,650	0/1:24,16:41:99:640,0,800	0/1:23,14:37:99:419,0,858	0/1:19,14:33:99:408,0,454	0/1:23,35:58:99:1401,0,777	0/1:22,34:56:99:1358,0,736	0/1:29,27:56:99:1073,0,953	0/0:5,0:5:15.05:0,15,209
chr10	38294075	.	C	CT	3657.49	PASS	AB=0.827;AC=16;AF=0.286;AN=56;BaseQRankSum=5.411;DP=1151;FS=1.442;HRun=1;HaplotypeScore=321.3675;InbreedingCoeff=-0.3854;MQ=63.50;MQ0=0;MQRankSum=-12.474;QD=5.02;ReadPosRankSum=1.581;VQSLOD=0.0487;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:50,5:55:99:105,0,1309	0/1:21,7:28:99:233,0,781	0/0:22,0:22:59.71:0,60,803	0/0:37,0:35:85.83:0,86,1074	0/0:45,0:45:59.01:0,59,819	0/1:31,7:38:99:183,0,1067	0/1:48,8:56:99:143,0,1494	0/1:49,12:61:99:343,0,1731	0/0:35,0:35:99:0,99,1358	0/1:49,11:60:99:319,0,1787	0/1:33,6:39:0.82:1,0,614	0/1:29,12:41:99:414,0,895	0/0:45,0:45:99:0,129,1757	0/0:39,0:39:87.25:0,87,1161	0/0:52,0:52:99:0,114,1575	0/0:37,0:37:99:0,111,1531	0/0:21,0:20:41.63:0,42,568	0/1:34,3:37:34.28:34,0,1153	0/1:43,8:51:99:247,0,1409	0/1:28,10:38:99:115,0,559	0/0:39,1:40:74.07:0,74,1180	0/0:44,0:44:84.26:0,84,1151	0/1:17,19:36:99:405,0,333	0/1:24,10:34:99:138,0,551	0/1:40,13:53:99:339,0,1265	0/1:34,13:47:99:444,0,1284	0/1:47,8:54:99:194,0,1416	0/0:5,0:5:15.05:0,15,210
chr10	38294088	.	CT	C	6803.19	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=8.081;DP=1042;FS=13.314;HRun=1;HaplotypeScore=279.0591;InbreedingCoeff=0.9789;MQ=66.05;MQ0=0;MQRankSum=-4.983;QD=23.22;ReadPosRankSum=3.314;VQSLOD=1.6652;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:75.04:0,75,1133	0/0:29,0:29:54.06:0,54,753	0/0:28,1:29:79.87:0,80,1275	0/0:34,0:32:83.94:0,84,1254	1/1:9,29:38:50.36:661,50,0	0/0:36,0:36:38.92:0,39,588	0/0:54,0:54:96.03:0,96,1412	0/0:41,0:41:99:0,114,1381	1/1:11,20:31:38.24:749,38,0	0/0:49,0:49:99:0,126,1512	0/0:37,0:37:44.97:0,45,685	0/0:35,0:35:78.13:0,78,1196	1/1:10,30:40:93.23:1181,93,0	1/1:8,27:35:60.49:896,60,0	1/1:15,33:48:81.31:1170,81,0	1/1:13,29:42:72.49:1055,72,0	1/1:7,15:21:24.93:498,25,0	0/0:34,0:34:74.98:0,75,1057	0/0:42,0:42:99:0,120,1649	0/0:32,0:32:36.08:0,36,548	0/0:34,0:34:66.04:0,66,968	1/1:15,22:37:14.01:594,14,0	0/0:38,0:38:38.46:0,38,608	0/0:32,0:32:57.03:0,57,909	0/0:49,0:49:69.10:0,69,1070	0/0:41,0:41:89.89:0,90,1098	0/0:51,0:49:98.91:0,99,1356	0/0:3,0:3:6.02:0,6,96
chr10	38295308	.	AT	A	3863.21	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=6.572;DP=707;FS=3.365;HRun=5;HaplotypeScore=79.5130;InbreedingCoeff=0.9998;MQ=82.35;MQ0=0;MQRankSum=-2.484;QD=30.18;ReadPosRankSum=0.347;VQSLOD=4.2138;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,108,1473	0/0:12,0:12:33.11:0,33,450	0/0:23,0:23:63.03:0,63,801	0/0:18,0:18:36.52:0,37,440	0/0:35,0:35:99:0,105,1415	0/0:32,0:32:87.29:0,87,1190	0/0:16,0:16:48.14:0,48,639	1/1:1,31:32:90.24:1011,90,0	0/0:25,0:25:69.20:0,69,910	0/0:24,0:24:72.24:0,72,981	0/0:27,0:27:78.26:0,78,1064	0/0:29,0:29:87.29:0,87,1189	0/0:20,0:20:54.17:0,54,724	0/0:27,0:27:81.27:0,81,1108	0/0:26,0:26:78.26:0,78,1067	0/0:31,0:31:87.29:0,87,1190	0/0:26,0:26:78.26:0,78,1064	0/0:22,0:22:66.18:0,66,881	1/1:0,14:14:42.11:470,42,0	1/1:5,32:37:93.26:1055,93,0	1/1:1,11:12:30.09:340,30,0	0/0:36,0:36:96.32:0,96,1305	0/0:30,0:30:78.26:0,78,1057	0/0:19,0:19:48.16:0,48,657	0/0:21,0:21:57.19:0,57,780	0/0:24,0:24:63.21:0,63,862	1/1:1,32:33:87.72:987,88,0	0/0:19,0:19:51.15:0,51,681
chr10	38297593	.	CT	C	22488.97	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-0.842;DP=634;FS=8.173;HRun=1;HaplotypeScore=68.0309;InbreedingCoeff=0.9979;MQ=88.60;MQ0=0;MQRankSum=-10.907;QD=38.31;ReadPosRankSum=6.926;VQSLOD=4.5830;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,38:38:99:1510,108,0	1/1:0,8:8:21.07:294,21,0	0/0:23,0:23:61.08:0,61,911	0/0:24,0:24:51.88:0,52,948	1/1:0,26:26:63.21:871,63,0	1/1:0,18:18:48.16:671,48,0	1/1:0,28:28:75.25:1049,75,0	1/1:0,20:20:60.19:819,60,0	1/1:0,24:24:66.06:920,66,0	1/1:0,21:20:60.20:836,60,0	1/1:0,17:17:45.15:628,45,0	1/1:0,19:19:45.15:629,45,0	1/1:0,20:20:57.19:796,57,0	1/1:0,34:34:96.32:1341,96,0	1/1:0,19:19:48.16:671,48,0	1/1:0,24:24:69.23:965,69,0	1/1:0,34:34:93.31:1300,93,0	1/1:0,17:17:45.15:629,45,0	1/1:0,27:27:81.23:1081,81,0	1/1:0,20:20:57.19:794,57,0	1/1:0,20:20:54.18:752,54,0	1/1:0,24:24:66.22:923,66,0	1/1:0,16:16:45.15:629,45,0	1/1:0,21:21:60.20:839,60,0	1/1:0,22:22:54.18:755,54,0	1/1:0,23:23:69.22:948,69,0	1/1:0,25:25:69.23:959,69,0	1/1:0,22:22:63.21:881,63,0
chr10	38297670	.	AGTCCCCAGCAG	A	9240.93	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=9.757;DP=691;FS=3.031;HRun=0;HaplotypeScore=238.0749;InbreedingCoeff=0.9996;MQ=87.54;MQ0=0;MQRankSum=-13.912;QD=88.01;ReadPosRankSum=-0.854;VQSLOD=4.3733;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,154,8305	0/0:9,0:9:27.09:0,27,1377	0/0:24,0:24:69.20:0,69,3093	0/0:29,0:29:83.43:0,83,3859	0/0:18,0:18:54.19:0,54,2709	0/0:25,0:25:63.22:0,63,3536	0/0:26,0:26:78.25:0,78,4356	1/1:5,24:30:75.25:2637,75,0	0/0:21,0:21:57.20:0,57,3147	0/0:26,0:26:75.26:0,75,4112	0/0:23,0:23:66.23:0,66,3614	0/0:27,0:27:78.27:0,78,4520	0/0:22,0:22:66.23:0,66,3564	0/0:32,0:32:96.32:0,96,5203	0/0:28,0:28:78.27:0,78,4356	0/0:19,0:19:54.19:0,54,3022	0/0:36,0:36:99:0,105,5902	0/0:26,0:26:72.25:0,72,4071	1/1:6,20:26:69.24:2368,69,0	1/1:1,15:16:48.15:1571,48,0	1/1:4,9:13:30.02:817,30,0	0/0:25,0:25:72.25:0,72,3907	0/0:18,0:18:51.15:0,51,2807	0/0:29,0:29:87.28:0,87,4521	0/0:23,0:23:60.21:0,60,3278	0/0:31,0:31:93.32:0,93,5251	1/1:3,17:20:51.18:1849,51,0	0/0:15,0:15:39.13:0,39,2191
chr10	38297735	.	A	AT	2313.22	PASS	AB=0.586;AC=9;AF=0.161;AN=56;BaseQRankSum=-4.900;DP=695;FS=3.577;HRun=10;HaplotypeScore=78.8666;InbreedingCoeff=0.7966;MQ=73.07;MQ0=0;MQRankSum=-0.210;QD=18.96;ReadPosRankSum=-4.059;VQSLOD=2.8307;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:63,2:67:99:0,143,1353	0/0:5,0:6:14.01:0,14,104	0/0:16,0:15:20.43:0,20,157	0/0:11,0:11:6.53:0,7,108	0/0:34,1:35:54.88:0,55,657	0/0:15,0:15:35.95:0,36,295	0/0:26,1:29:5.99:0,6,440	1/1:4,18:24:30.72:478,31,0	0/0:17,0:17:41.92:0,42,343	0/0:26,1:27:39.93:0,40,534	0/0:17,0:17:32.95:0,33,271	0/0:28,0:29:56.97:0,57,553	0/0:25,0:25:68.91:0,69,566	0/0:37,1:38:72.89:0,73,806	0/0:26,0:25:62.86:0,63,513	0/0:29,0:30:85.89:0,86,689	0/0:28,0:28:62.89:0,63,514	0/0:24,0:24:53.88:0,54,440	1/1:14,14:29:13.69:523,14,0	1/1:10,14:25:10.69:502,11,0	0/1:5,12:17:4.17:364,0,4	0/0:19,1:20:47.92:0,48,394	0/0:20,0:20:50.90:0,51,415	0/0:30,1:31:57.88:0,58,679	0/0:22,1:23:24.93:0,25,411	0/0:32,0:32:68.87:0,69,566	1/1:7,19:26:19.74:604,20,0	0/0:7,0:7:2.19:0,2,107
chr10	38298291	.	TTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	T	205.93	PASS	AB=0.811;AC=7;AF=0.135;AN=52;BaseQRankSum=3.793;DP=395;FS=0.000;HRun=0;HaplotypeScore=263.9592;InbreedingCoeff=0.0363;MQ=68.52;MQ0=20;MQRankSum=-2.440;QD=3.38;ReadPosRankSum=-0.835;VQSLOD=2.1205;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:17.29:0,17,514	0/0:4,0:5:9.03:0,9,442	0/0:25,0:19:14.20:0,14,486	0/0:31,0:25:26.92:0,27,764	./.	0/0:7,0:7:9.02:0,9,404	0/0:23,0:23:39.13:0,39,2171	0/0:25,0:24:30.02:0,30,1209	0/1:5,0:6:40.27:40,0,445	0/0:14,0:12:15.04:0,15,483	0/0:7,0:11:3.48:0,3,140	0/0:4,7:11:0.89:0,1,2	0/1:10,0:11:99:140,0,222	0/0:9,0:11:12.01:0,12,143	0/1:6,0:9:15.46:15,0,176	0/1:10,0:13:24.25:24,0,267	0/1:10,0:13:57.24:57,0,249	0/0:9,0:15:18.06:0,18,687	0/0:8,0:7:5.61:0,6,100	0/0:7,0:7:12.04:0,12,1090	0/0:27,0:25:21:0,21,1433	0/0:8,0:7:6:0,6,295	1/1:7,0:7:3.01:50,3,0	0/0:7,11:17:2.99:0,3,24	0/0:17,0:18:21.05:0,21,814	0/0:10,0:10:18.06:0,18,940	0/0:14,0:14:30.57:0,31,2325	./.
chr10	38298333	.	GTGTGTGTGTGTGTA	G	1416.90	PASS	AB=0.917;AC=17;AF=0.340;AN=50;BaseQRankSum=3.175;DP=377;FS=4.224;HRun=0;HaplotypeScore=141.0648;InbreedingCoeff=0.0858;MQ=32.86;MQ0=68;MQRankSum=-0.681;QD=7.23;ReadPosRankSum=3.447;VQSLOD=2.4434;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:18,1:16:2.48:9,2,0	1/1:8,0:8:11.36:194,11,0	./.	./.	0/1:14,0:12:0:0,0,0	0/1:11,6:15:5.82:6,0,11	0/1:24,1:20:31.76:92,0,32	0/0:19,0:18:43.25:0,43,331	0/1:15,0:14:21.48:103,0,21	0/1:11,3:8:46.57:116,0,47	0/0:12,0:10:0.47:0,0,1	0/0:15,0:13:3.56:0,4,10	0/1:11,0:8:31.14:285,0,31	0/0:10,0:6:0.89:0,1,2	1/1:10,0:8:4.87:112,5,0	1/1:12,0:9:0.92:173,1,0	0/1:20,0:12:48.65:101,0,49	0/1:15,0:13:70.40:360,0,70	0/0:14,0:12:5.45:0,5,441	0/0:12,0:10:10.80:0,11,150	0/0:20,0:16:4.30:0,4,254	0/0:8,0:6:4.90:0,5,87	0/0:9,0:9:4.43:0,4,8	0/0:29,0:23:3.88:0,4,26	0/1:10,6:14:0:0,0,0	0/0:9,0:6:17.13:0,17,95	0/0:20,0:16:23.09:0,23,392	./.
chr10	38298392	.	AGAGAGAGAGC	A	1022.05	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=2.273;DP=502;FS=2.751;HRun=0;HaplotypeScore=137.1648;InbreedingCoeff=0.5707;MQ=58.85;MQ0=41;MQRankSum=-0.698;QD=4.31;ReadPosRankSum=-1.381;VQSLOD=2.4506;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,20:25:2.93:18,3,0	0/0:8,0:7:11.17:0,11,109	0/0:19,0:10:6.97:0,7,116	0/1:22,0:12:8.79:9,0,119	0/0:21,0:19:27.05:0,27,192	0/0:18,0:17:27.03:0,27,359	0/0:18,0:17:34.29:0,34,531	1/1:35,0:34:35.89:523,36,0	0/0:26,0:26:29.94:0,30,186	0/0:12,0:12:32.64:0,33,439	0/0:10,0:8:7.64:0,8,90	1/1:19,0:19:3.07:11,3,0	0/0:17,0:15:28.76:0,29,368	0/0:8,0:7:8.63:0,9,58	0/0:17,0:15:26.52:0,27,198	0/0:18,0:17:25.46:0,25,255	0/0:19,0:13:24.75:0,25,257	0/0:10,0:8:18.05:0,18,393	1/1:11,0:11:14.79:175,15,0	1/1:15,0:14:10.81:74,11,0	1/1:26,0:23:0.80:5,1,0	0/0:17,0:16:26.83:0,27,185	1/1:18,0:18:17.86:136,18,0	0/1:28,0:24:48.63:124,0,49	0/0:21,0:17:32.61:0,33,259	0/1:14,0:12:42.06:42,0,313	1/1:21,1:20:1.66:82,2,0	0/0:6,0:2:6.01:0,6,111
chr10	38298394	.	AGAGAGAGC	A	1221.83	PASS	AB=0.909;AC=19;AF=0.339;AN=56;BaseQRankSum=2.364;DP=504;FS=0.552;HRun=0;HaplotypeScore=126.7164;InbreedingCoeff=0.5653;MQ=62.59;MQ0=36;MQRankSum=-1.402;QD=4.89;ReadPosRankSum=-0.935;VQSLOD=1.7990;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:24,3:25:2.94:18,3,0	0/0:7,0:6:10.99:0,11,77	0/0:21,0:12:12.75:0,13,166	0/1:23,0:13:6.07:6,0,134	0/0:22,0:20:29.58:0,30,216	0/0:19,0:18:29.83:0,30,247	0/0:19,0:18:38.57:0,39,404	1/1:36,0:35:62.67:606,63,0	0/0:26,0:26:27.49:0,27,181	0/1:12,0:12:10.57:11,0,255	0/0:11,0:9:10.80:0,11,96	1/1:19,0:19:3.31:37,3,0	0/0:17,0:15:28.07:0,28,296	0/0:8,0:7:8.66:0,9,58	0/0:15,0:14:27.40:0,27,199	0/0:18,0:18:28.04:0,28,249	0/0:18,0:14:30.09:0,30,259	0/0:10,0:8:18.04:0,18,266	1/1:3,7:10:16.11:210,16,0	1/1:3,12:14:13.97:94,14,0	0/1:7,18:22:0.25:0,0,0	0/0:17,0:16:26.63:0,27,186	1/1:17,0:17:20.97:186,21,0	0/1:27,1:25:6.96:146,0,7	0/0:20,0:16:32.59:0,33,235	0/1:14,0:12:19.06:19,0,250	1/1:3,21:22:5.65:71,6,0	0/0:6,0:2:6.01:0,6,88
chr10	38298396	.	AGAGAGC	A	1294.74	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=1.667;DP=486;FS=0.551;HRun=0;HaplotypeScore=109.5407;InbreedingCoeff=0.7526;MQ=64.97;MQ0=33;MQRankSum=-1.308;QD=6.57;ReadPosRankSum=-1.583;VQSLOD=1.4810;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:25:2.93:18,3,0	0/0:6,0:5:11.16:0,11,77	0/0:22,0:13:15.72:0,16,186	0/1:23,0:13:6.08:6,0,134	0/0:23,0:21:33.21:0,33,242	0/0:18,0:17:28.34:0,28,201	0/0:18,0:17:37:0,37,270	1/1:36,0:35:69.57:639,70,0	0/0:25,0:25:27.29:0,27,179	0/0:12,0:12:31.82:0,32,276	0/0:8,0:7:10.16:0,10,63	1/1:7,13:20:3.27:70,3,0	0/0:16,0:14:24.89:0,25,205	0/0:9,0:8:8.66:0,9,58	0/0:13,0:12:26.81:0,27,198	0/0:17,0:17:30.10:0,30,252	0/0:17,0:13:29.22:0,29,236	0/0:9,0:7:16.82:0,17,161	1/1:10,0:10:17.10:182,17,0	1/1:14,0:14:14.35:94,14,0	0/0:22,0:20:0:0,0,0	0/0:16,0:15:26.92:0,27,186	1/1:14,1:15:23.97:240,24,0	1/1:28,1:26:3.61:168,4,0	0/0:17,0:14:32.59:0,33,235	0/0:15,0:13:15.59:0,16,166	1/1:24,0:22:5.85:59,6,0	0/0:6,0:2:6.01:0,6,61
chr10	38300012	.	A	ATTT	2901.28	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=10.959;DP=626;FS=1.698;HRun=10;HaplotypeScore=93.0678;InbreedingCoeff=0.9190;MQ=70.06;MQ0=0;MQRankSum=3.276;QD=15.60;ReadPosRankSum=-2.362;VQSLOD=1.3252;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:80.53:0,81,967	1/1:0,1:9:20.92:192,21,0	0/0:8,0:9:17.68:0,18,172	0/1:8,0:8:19.82:20,0,153	0/0:29,0:29:69.12:0,69,839	1/1:4,0:25:53.79:411,54,0	1/1:5,0:20:32.87:252,33,0	0/0:32,0:32:54.02:0,54,647	0/0:25,0:25:69.20:0,69,839	1/1:3,0:27:70.07:616,70,0	1/1:3,1:18:36.81:355,37,0	0/0:19,0:19:57.17:0,57,692	0/0:18,0:18:48.12:0,48,584	0/0:17,0:17:48.15:0,48,583	0/0:23,0:23:57.14:0,57,693	0/0:20,0:20:48.09:0,48,572	0/0:21,0:21:41.98:0,42,511	1/1:3,0:15:29.89:229,30,0	0/0:22,0:23:43.42:0,43,544	0/0:36,0:36:93.18:0,93,1114	0/0:26,0:26:69.15:0,69,839	0/0:27,0:28:74.82:0,75,868	0/0:21,0:21:60.16:0,60,724	0/0:20,0:20:48.06:0,48,583	1/1:2,1:23:46.10:380,46,0	1/1:6,0:24:49.12:428,49,0	0/0:38,0:38:96.16:0,96,1153	1/1:1,0:17:32.38:235,32,0
chr10	38310243	.	TTCGG	T	7065.75	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=5.011;DP=730;FS=10.492;HRun=0;HaplotypeScore=136.3813;InbreedingCoeff=0.9971;MQ=78.40;MQ0=0;MQRankSum=-5.743;QD=46.18;ReadPosRankSum=2.573;VQSLOD=5.3766;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:63,0:63:99:0,160,4062	1/1:1,14:15:30.10:599,30,0	0/0:24,0:24:72.22:0,72,1805	0/0:20,0:20:57.05:0,57,1327	0/0:18,0:18:48.16:0,48,1231	1/1:1,18:19:48.16:958,48,0	1/1:2,32:34:81.28:1615,81,0	0/0:32,0:32:93.24:0,93,2305	0/0:34,0:34:99:0,102,2619	1/1:0,20:20:60.13:1082,60,0	1/1:0,8:8:15.05:299,15,0	0/0:29,0:29:84.11:0,84,2089	0/0:34,0:34:99:0,99,2437	0/0:28,0:28:83.88:0,84,2012	0/0:41,0:41:99:0,117,3167	0/0:26,0:26:78.27:0,78,2155	0/0:54,0:54:99:0,156,4002	1/1:0,20:20:36.08:679,36,0	0/0:20,0:19:53.18:0,53,1144	0/0:19,0:19:48.03:0,48,1269	0/0:31,0:31:81.26:0,81,2137	0/0:15,0:15:36.12:0,36,961	0/0:22,0:22:60.20:0,60,1512	0/0:43,0:43:99:0,120,3171	1/1:0,11:11:27.09:533,27,0	1/1:2,14:16:42.13:762,42,0	0/0:24,0:24:63.21:0,63,1625	1/1:0,10:10:27.09:539,27,0
chr10	38310655	.	G	GT	1668.70	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.779;DP=741;FS=6.219;HRun=2;HaplotypeScore=97.1085;InbreedingCoeff=0.9914;MQ=87.44;MQ0=0;MQRankSum=-5.106;QD=31.48;ReadPosRankSum=2.488;VQSLOD=3.2659;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,49:53:99:1764,127,0	0/0:12,0:12:33.10:0,33,409	0/0:29,0:29:84.23:0,84,1011	0/0:23,0:23:63.11:0,63,736	0/0:29,0:29:80.86:0,81,435	0/0:19,0:19:54.17:0,54,669	0/0:39,0:39:99:0,111,1350	0/0:34,0:34:96.29:0,96,1179	0/0:39,0:39:99:0,103,548	0/0:21,0:21:63.20:0,63,781	0/0:15,0:15:45.14:0,45,557	0/0:24,0:24:72.21:0,72,878	0/0:32,0:32:85.90:0,86,444	0/0:22,0:22:52.96:0,53,272	0/0:33,0:32:57.38:0,57,387	0/0:28,0:28:79.74:0,80,396	0/0:29,0:29:75.34:0,75,409	0/0:18,0:18:54.14:0,54,653	0/0:20,0:20:57.09:0,57,660	0/0:29,0:29:78.23:0,78,954	0/0:46,0:46:99:0,135,1645	0/0:24,0:24:43.39:0,43,331	0/0:12,0:12:36.11:0,36,446	0/0:32,0:32:90.28:0,90,1116	0/0:14,0:14:33.10:0,33,408	0/0:34,0:34:96.29:0,96,1178	0/0:25,0:25:75.24:0,75,929	0/0:6,0:6:18.06:0,18,222
chr10	38311409	.	G	GTCTTGTGT	24566.01	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=11.247;DP=690;FS=3.082;HRun=0;HaplotypeScore=182.1259;InbreedingCoeff=0.9939;MQ=85.07;MQ0=0;MQRankSum=-19.436;QD=103.22;ReadPosRankSum=-1.032;VQSLOD=5.3004;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,12:24:51.18:1988,51,0	0/0:13,0:13:39.09:0,39,913	0/0:25,0:25:69.24:0,69,1794	0/0:27,0:27:10.97:0,11,1284	1/1:10,23:34:78.22:3053,78,0	0/0:35,0:35:99:0,99,2387	0/0:27,0:27:78.27:0,78,2138	0/0:31,0:31:87.29:0,87,2302	1/1:6,16:23:60.16:2503,60,0	0/0:29,0:29:78.27:0,78,2117	0/0:26,0:26:75.23:0,75,1903	0/0:32,0:32:96.33:0,96,2643	1/1:7,22:30:84.29:3651,84,0	1/1:5,20:27:72.25:3145,72,0	1/1:11,20:33:77.84:3319,78,0	1/1:8,19:29:72.25:3099,72,0	1/1:5,17:23:57.20:2442,57,0	0/0:23,0:23:69.19:0,69,1714	0/0:21,0:21:63.19:0,63,1553	0/0:27,0:27:78.27:0,78,2181	0/0:17,0:17:51.16:0,51,1368	1/1:4,8:15:33.11:1366,33,0	0/0:16,0:16:45.15:0,45,1259	0/0:27,0:27:75.26:0,75,1958	0/0:17,0:17:45.15:0,45,1202	0/0:20,0:20:60.20:0,60,1591	0/0:27,0:27:81.28:0,81,2203	0/0:12,0:12:33.08:0,33,858
chr10	38313055	.	C	CT	9895.64	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=10.887;DP=701;FS=2.887;HRun=2;HaplotypeScore=114.4764;InbreedingCoeff=0.9999;MQ=91.00;MQ0=0;MQRankSum=-5.057;QD=39.11;ReadPosRankSum=2.951;VQSLOD=4.5522;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,33:35:96.26:1338,96,0	0/0:14,0:14:42.13:0,42,521	0/0:39,0:39:78.50:0,78,1096	0/0:18,0:18:48.15:0,48,585	1/1:3,26:29:72.24:1036,72,0	0/0:24,0:24:69.20:0,69,843	0/0:21,0:21:63.17:0,63,756	0/0:25,0:25:75.22:0,75,909	1/1:1,22:23:66.18:927,66,0	0/0:35,0:35:99:0,102,1233	0/0:22,0:22:63.17:0,63,756	0/0:24,0:24:72.21:0,72,880	1/1:0,32:32:90.30:1296,90,0	1/1:2,26:28:81.27:1165,81,0	1/1:0,22:22:63.21:905,63,0	1/1:1,33:34:93.31:1339,93,0	1/1:1,19:20:54.18:773,54,0	0/0:24,0:24:69.22:0,69,855	0/0:20,0:20:60.18:0,60,733	0/0:25,0:25:72.21:0,72,880	0/0:18,0:18:54.17:0,54,669	1/1:2,28:30:81.16:1118,81,0	0/0:26,0:26:78.18:0,78,947	0/0:24,0:24:69.20:0,69,843	0/0:24,0:24:69.19:0,69,830	0/0:33,0:33:99:0,99,1207	0/0:22,0:22:60.18:0,60,731	0/0:10,0:10:30.09:0,30,372
chr10	38317561	.	CAAAAAA	C	7351.50	PASS	AB=0.603;AC=31;AF=0.554;AN=56;BaseQRankSum=13.484;DP=583;FS=1.168;HRun=14;HaplotypeScore=173.9743;InbreedingCoeff=0.7563;MQ=67.65;MQ0=3;MQRankSum=-9.812;QD=20.20;ReadPosRankSum=9.195;VQSLOD=0.5053;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,20:24:48.11:877,48,0	0/0:4,0:5:15.05:0,15,485	0/0:40,0:18:44.48:0,44,598	0/0:24,0:13:16.85:0,17,184	1/1:5,27:32:68.59:1026,69,0	0/0:9,0:10:24.07:0,24,617	0/0:12,0:14:36.11:0,36,935	0/1:13,0:32:97.61:108,0,98	1/1:7,18:25:42.02:800,42,0	0/0:20,0:20:48.14:0,48,1132	0/0:17,0:20:57.11:0,57,1498	1/1:2,1:20:35.06:224,35,0	1/1:4,15:19:39.10:743,39,0	1/1:4,14:18:33.05:628,33,0	1/1:3,16:19:39.10:743,39,0	1/1:4,8:12:15:286,15,0	1/1:6,18:24:30.02:550,30,0	0/0:25,0:25:72.13:0,72,1657	0/1:7,0:19:57.49:57,0,60	1/1:6,0:30:24.31:139,24,0	1/1:3,0:9:3.94:26,4,0	1/1:2,14:16:41.91:717,42,0	1/1:8,0:25:31.27:188,31,0	1/1:2,0:15:28.73:151,29,0	0/0:15,0:19:48.10:0,48,1203	0/0:13,0:21:60.16:0,60,1442	0/1:6,0:25:34.76:90,0,35	0/0:17,0:21:57.16:0,57,1413
chr10	38317575	.	A	AC	3112.02	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=10.821;DP=566;FS=0.000;HRun=3;HaplotypeScore=137.7932;InbreedingCoeff=0.9842;MQ=75.13;MQ0=3;MQRankSum=-8.678;QD=11.23;ReadPosRankSum=2.750;VQSLOD=1.7896;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:27:54.68:291,55,0	0/0:8,0:8:20.12:0,20,218	0/0:40,0:21:28.16:0,28,339	0/0:25,0:17:7.52:0,8,177	1/1:29,0:29:46.89:250,47,0	0/0:11,0:11:29.13:0,29,313	0/0:15,0:15:23.65:0,24,240	1/1:23,5:28:69.69:488,70,0	1/1:18,0:18:36.46:149,36,0	0/0:20,0:20:49.39:0,49,500	0/0:22,0:22:44.99:0,45,548	0/0:23,0:23:46.90:0,47,294	1/1:17,0:17:39.96:188,40,0	1/1:16,0:16:28.49:115,28,0	1/1:18,0:18:40.17:195,40,0	1/1:8,0:8:12.98:53,13,0	1/1:21,0:21:27.97:141,28,0	0/0:30,0:30:71.64:0,72,713	1/1:15,1:16:44.03:301,44,0	1/1:26,1:27:76.71:427,77,0	1/1:9,2:11:26.35:181,26,0	1/1:14,0:14:36.40:154,36,0	0/0:19,0:19:41.57:0,42,236	0/0:17,0:17:38.24:0,38,245	0/0:18,0:18:43.69:0,44,466	0/0:24,0:24:54.52:0,55,474	1/1:26,1:27:66.52:410,67,0	0/0:17,0:17:40.57:0,41,427
chr10	38318717	.	TGC	T	416.23	PASS	AB=0.990;AC=15;AF=0.268;AN=56;BaseQRankSum=-0.006;DP=727;FS=35.526;HRun=0;HaplotypeScore=211.9303;InbreedingCoeff=-0.2055;MQ=62.56;MQ0=4;MQRankSum=-0.097;QD=1.08;ReadPosRankSum=-4.494;VQSLOD=0.1104;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:37,0:34:13.89:45,0,14	0/0:8,0:8:24.07:0,24,400	0/0:27,0:12:6.41:0,6,83	0/0:21,0:7:0.80:0,1,30	0/1:26,0:26:5.92:6,0,47	0/0:20,0:20:43.35:0,43,799	0/0:41,0:41:96.54:0,97,1732	0/1:30,0:30:99:109,0,344	0/1:28,0:28:10.63:11,0,107	0/0:28,0:28:81.13:0,81,1246	0/0:17,0:17:48.07:0,48,732	0/1:18,1:19:34.88:35,0,330	0/1:25,0:25:43.40:43,0,55	0/1:23,0:24:25.46:30,0,25	0/1:26,0:26:2.78:3,0,78	1/1:11,0:11:5.88:50,6,0	0/1:22,0:22:51.51:52,0,53	0/0:32,0:32:55.93:0,56,1422	0/1:15,0:15:40.75:41,0,180	0/0:24,0:24:20.54:0,21,455	0/1:55,2:57:24:24,0,973	0/1:24,0:24:18.03:36,0,18	0/0:31,0:31:31.87:0,32,545	0/1:39,2:41:86.51:87,0,669	0/0:28,0:28:63.50:0,63,1224	0/0:24,0:24:50.68:0,51,974	0/0:19,0:18:26.93:0,27,369	0/0:21,0:21:63.20:0,63,1100
chr10	38318720	.	G	GCA	2470.63	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=9.768;DP=725;FS=8.473;HRun=0;HaplotypeScore=207.0403;InbreedingCoeff=0.8345;MQ=59.67;MQ0=5;MQRankSum=-6.832;QD=10.42;ReadPosRankSum=-3.694;VQSLOD=1.7165;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:9,27:33:20.92:337,21,0	0/0:9,0:9:27.06:0,27,369	0/0:30,0:11:17.97:0,18,193	0/0:22,0:6:6.01:0,6,62	1/1:4,21:26:12.28:106,12,0	0/0:20,0:20:57.15:0,57,830	0/0:41,0:41:99:0,120,1743	0/0:30,0:30:52.08:0,52,341	1/1:8,20:28:21.19:520,21,0	0/0:28,0:28:81.23:0,81,1187	0/0:17,0:17:48.16:0,48,719	0/0:19,0:19:47.55:0,48,344	1/1:6,19:25:37.53:469,38,0	1/1:6,19:25:27.71:360,28,0	1/1:8,17:25:21.11:255,21,0	1/1:2,9:11:4.16:53,4,0	1/1:9,13:22:1.14:380,1,0	0/0:32,0:32:93.31:0,93,1388	0/1:16,0:15:21.18:21,0,135	0/0:24,0:24:59.49:0,59,410	0/0:56,0:56:93.23:0,93,940	1/1:6,16:23:13.90:172,14,0	0/0:30,0:30:70.86:0,71,504	0/0:40,0:40:86.88:0,87,705	0/0:28,0:28:84.26:0,84,1220	0/0:24,0:24:66.21:0,66,968	0/0:17,0:16:33.90:0,34,262	0/0:21,0:21:63.21:0,63,957
chr10	38318735	.	T	TGCAC	2416.08	PASS	AB=0.577;AC=17;AF=0.304;AN=56;BaseQRankSum=5.663;DP=748;FS=4.902;HRun=0;HaplotypeScore=242.7744;InbreedingCoeff=0.8551;MQ=53.20;MQ0=7;MQRankSum=-6.726;QD=10.33;ReadPosRankSum=1.028;VQSLOD=2.6472;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:24,10:31:8.73:212,9,0	0/0:8,0:8:12.04:0,12,205	0/0:38,0:11:17.23:0,17,319	0/0:32,0:10:1.55:0,2,233	1/1:6,18:24:6.02:140,6,0	0/0:17,0:17:39.13:0,39,660	0/0:36,0:36:69.24:0,69,1157	0/0:28,0:28:51.16:0,51,835	1/1:9,21:32:32.88:790,33,0	0/0:28,0:28:66.22:0,66,1103	0/0:12,0:12:30.10:0,30,511	0/0:19,0:19:45.14:0,45,734	1/1:8,16:24:33.05:653,33,0	1/1:11,15:28:8.99:211,9,0	1/1:5,16:22:12:213,12,0	0/1:4,10:15:0:0,0,0	1/1:14,12:28:14.44:314,14,0	0/0:34,0:34:84.17:0,84,1317	0/0:17,0:16:23.75:0,24,346	0/0:22,0:22:48.15:0,48,781	0/0:58,0:58:99:0,141,2303	1/1:8,17:27:3.01:70,3,0	0/0:29,0:29:69.19:0,69,1091	0/0:37,0:37:84.23:0,84,1314	0/0:26,0:26:60.19:0,60,997	0/0:26,0:26:45.15:0,45,739	0/0:16,0:15:42.12:0,42,648	0/0:30,0:30:90.22:0,90,1473
chr10	38318748	.	G	GCA	525.73	PASS	AB=0.983;AC=8;AF=0.143;AN=56;BaseQRankSum=11.850;DP=777;FS=14.820;HRun=0;HaplotypeScore=211.0676;InbreedingCoeff=0.0960;MQ=52.31;MQ0=10;MQRankSum=-8.408;QD=2.78;ReadPosRankSum=-0.258;VQSLOD=1.6424;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:25:18.15:18,0,209	0/0:5,0:5:15.05:0,15,228	0/0:40,0:11:33.10:0,33,468	0/0:42,0:14:38.50:0,39,540	0/1:25,0:25:23.46:23,0,134	0/0:16,0:16:48.16:0,48,728	0/0:39,0:39:99:0,102,1542	0/0:33,0:33:96.27:0,96,1378	0/1:33,1:34:99:181,0,133	0/0:24,0:24:69.23:0,69,1041	0/0:15,0:15:45.12:0,45,644	0/0:20,0:20:57.19:0,57,863	1/1:19,2:22:29.98:210,30,0	0/1:26,1:27:32.09:32,0,200	0/1:25,0:25:73.79:74,0,149	0/0:16,0:16:3.77:0,4,88	0/1:26,1:27:40.38:128,0,40	0/0:37,0:37:82.32:0,82,1448	0/0:18,0:16:42.08:0,42,566	0/0:21,0:21:60.15:0,60,823	0/0:70,0:70:99:0,192,2791	0/0:28,1:29:5.08:0,5,255	0/0:26,0:26:75.24:0,75,1125	0/0:39,0:39:99:0,111,1576	0/0:25,0:25:72.23:0,72,1069	0/0:25,0:25:72.24:0,72,1096	0/0:16,0:16:48.16:0,48,717	0/0:32,0:32:96.26:0,96,1439
chr10	38319677	.	CT	C	8911.04	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=1.552;DP=660;FS=3.970;HRun=8;HaplotypeScore=114.3043;InbreedingCoeff=0.9713;MQ=76.37;MQ0=0;MQRankSum=-0.489;QD=24.55;ReadPosRankSum=1.168;VQSLOD=4.3835;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,35:37:99:956,99,0	0/0:18,0:18:54.12:0,54,635	0/0:18,0:18:38.77:0,39,417	0/0:9,0:9:23.85:0,24,229	1/1:0,34:34:99:937,99,0	0/0:23,0:23:69.20:0,69,823	0/0:19,0:19:48.13:0,48,567	1/1:7,28:35:84.07:792,84,0	1/1:3,21:24:54.09:521,54,0	0/0:29,1:30:52.27:0,52,904	0/0:22,0:22:63.05:0,63,714	0/0:5,0:30:74.65:0,75,380	1/1:1,22:23:57.09:550,57,0	1/1:6,27:33:78.11:753,78,0	1/1:1,25:26:72.12:695,72,0	1/1:2,16:18:48.08:464,48,0	1/1:1,27:28:75.12:724,75,0	0/0:18,2:21:2.10:0,2,573	1/1:2,12:15:38.09:354,38,0	1/1:2,19:21:51.07:492,51,0	1/1:3,19:22:54.09:521,54,0	1/1:3,18:21:17.99:456,18,0	0/0:4,0:27:59.66:0,60,306	0/0:2,0:19:49:0,49,259	0/0:16,0:16:42.13:0,42,507	0/0:33,0:33:87.25:0,87,1039	1/1:1,25:26:72.11:695,72,0	0/0:11,0:12:32.97:0,33,377
chr10	38320209	.	C	CT	709.81	PASS	AB=0.818;AC=12;AF=0.214;AN=56;BaseQRankSum=2.057;DP=287;FS=5.824;HRun=0;HaplotypeScore=59.5568;InbreedingCoeff=-0.2875;MQ=74.68;MQ0=0;MQRankSum=-1.738;QD=5.22;ReadPosRankSum=0.176;VQSLOD=2.1877;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:6:15.05:0,15,209	0/0:3,0:3:9.02:0,9,111	0/1:18,1:12:18.50:19,0,248	0/0:20,0:16:16.59:0,17,379	0/0:13,0:13:21.06:0,21,276	0/0:12,0:12:32.83:0,33,389	0/1:12,2:14:99:161,0,99	0/0:5,0:5:5.32:0,5,77	0/1:7,2:9:90.15:90,0,142	0/0:12,0:12:26.68:0,27,345	0/0:5,0:5:12.82:0,13,102	0/1:7,4:11:67.85:123,0,68	0/1:9,1:10:3.94:4,0,152	0/1:8,1:9:29.63:30,0,168	0/1:3,2:5:32.94:78,0,33	0/1:3,4:7:85.02:123,0,85	0/1:6,3:9:71.85:83,0,72	0/1:14,3:17:62.26:62,0,270	0/0:13,0:13:22.89:0,23,358	0/0:13,0:13:23.93:0,24,292	0/0:5,1:5:8.33:0,8,51	0/0:10,0:10:8.06:0,8,178	0/0:10,0:10:13.61:0,14,176	0/1:12,3:15:24.07:24,0,205	0/1:9,2:11:60.79:61,0,167	0/0:10,0:10:27.03:0,27,324	0/0:5,0:5:13.59:0,14,104	0/0:8,0:8:23.01:0,23,251
chr10	38320258	.	TGTTGCCATTCTATCTA	T	1004.52	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.144;DP=439;FS=2.801;HRun=0;HaplotypeScore=196.2129;InbreedingCoeff=0.9887;MQ=86.72;MQ0=0;MQRankSum=-3.839;QD=91.32;ReadPosRankSum=-0.046;VQSLOD=3.3742;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,6:11:27.05:1099,27,0	0/0:7,0:7:21.07:0,21,1544	0/0:18,0:18:54.19:0,54,2613	0/0:16,0:16:36.28:0,36,2915	0/0:20,0:20:54.65:0,55,3785	0/0:29,0:29:84.29:0,84,6275	0/0:21,0:21:60.21:0,60,3756	0/0:19,0:18:48.14:0,48,2787	0/0:10,0:10:27.09:0,27,1926	0/0:19,0:19:57.20:0,57,4362	0/0:11,0:11:33.10:0,33,2312	0/0:13,0:13:39.12:0,39,2349	0/0:18,0:18:45.15:0,45,2994	0/0:12,0:12:36.12:0,36,2706	0/0:9,0:9:24.08:0,24,1514	0/0:13,0:13:30.10:0,30,2354	0/0:14,0:14:39.13:0,39,3138	0/0:26,0:26:75.26:0,75,5505	0/0:19,0:19:57.20:0,57,3232	0/0:21,0:21:60.20:0,60,4638	0/0:9,0:9:27.09:0,27,1889	0/0:16,0:16:48.15:0,48,3454	0/0:15,0:15:45.05:0,45,3009	0/0:16,0:16:42.14:0,42,2906	0/0:14,0:14:42.06:0,42,2976	0/0:20,0:20:60.21:0,60,4565	0/0:14,0:14:42.13:0,42,3006	0/0:9,0:9:27.09:0,27,1871
chr10	38320352	.	G	GGTT	8319.88	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-9.762;DP=476;FS=10.245;HRun=0;HaplotypeScore=59.7901;InbreedingCoeff=0.9889;MQ=62.51;MQ0=0;MQRankSum=-3.166;QD=56.99;ReadPosRankSum=4.722;VQSLOD=6.6784;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,14:16:42.14:990,42,0	0/0:5,0:5:15.04:0,15,247	0/0:7,0:7:17.07:0,17,259	0/0:7,0:7:18:0,18,278	1/1:2,23:28:72.03:1600,72,0	0/0:23,0:23:60.11:0,60,971	0/0:15,0:15:45.11:0,45,790	0/0:23,0:23:66.12:0,66,1034	1/1:0,11:11:24.08:565,24,0	0/0:23,0:23:69.22:0,69,1224	0/0:31,0:31:93.31:0,93,1686	0/0:22,0:22:57.18:0,57,1051	1/1:0,16:17:42.14:960,42,0	1/1:1,8:9:24.08:528,24,0	1/1:3,16:19:57.20:1299,57,0	1/1:0,13:13:24.08:589,24,0	1/1:2,20:22:12.50:1209,12,0	0/0:21,0:21:63.15:0,63,1120	0/0:14,0:14:42.10:0,42,727	0/0:23,0:23:69.23:0,69,1249	0/0:14,0:14:42.13:0,42,746	1/1:1,10:11:27.05:580,27,0	0/0:20,0:20:60.18:0,60,1050	0/0:11,0:11:33.06:0,33,544	0/0:23,0:23:69.20:0,69,1211	0/0:14,0:14:39.13:0,39,695	0/0:25,0:25:75.24:0,75,1352	0/0:9,0:9:27.05:0,27,465
chr10	38321540	.	G	GGAA	394.35	PASS	AB=1.000;AC=14;AF=0.250;AN=56;BaseQRankSum=3.054;DP=302;FS=17.760;HRun=0;HaplotypeScore=58.9543;InbreedingCoeff=0.4111;MQ=81.65;MQ0=8;MQRankSum=-1.844;QD=4.75;ReadPosRankSum=-2.945;VQSLOD=-0.3928;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:13,0:13:19.54:20,0,83	0/0:2,0:2:5.61:0,6,61	0/0:35,0:25:59.26:0,59,929	0/0:21,0:15:35.82:0,36,478	1/1:8,0:8:2.89:25,3,0	0/0:7,0:7:18.05:0,18,276	0/0:14,0:14:41.95:0,42,586	0/0:10,0:9:14.66:0,15,190	0/1:5,0:5:23.86:99,0,24	0/0:18,0:17:47.13:0,47,667	0/0:6,0:6:14.40:0,14,189	0/0:14,0:13:17.87:0,18,273	1/1:3,0:3:6:51,6,0	0/1:5,0:5:6.73:54,0,7	0/1:7,0:6:0.98:92,0,1	0/1:7,0:6:4.83:48,0,5	1/1:4,7:11:9.31:72,9,0	0/0:11,0:11:33.09:0,33,516	0/0:13,0:13:38.88:0,39,428	0/0:6,0:6:11.87:0,12,173	0/0:28,0:28:26.19:0,26,635	1/1:7,0:7:12.48:91,12,0	0/0:6,0:6:2.45:0,2,65	0/1:17,0:16:0.22:0,0,156	0/0:6,0:6:9.84:0,10,93	0/0:10,0:10:16.80:0,17,160	0/0:9,0:8:21.04:0,21,282	0/0:3,0:2:5.99:0,6,73
chr10	38321566	.	G	GGA	304.93	PASS	AB=0.748;AC=9;AF=0.180;AN=50;BaseQRankSum=-2.862;DP=160;FS=0.000;HRun=0;HaplotypeScore=33.4518;InbreedingCoeff=0.2335;MQ=64.51;MQ0=11;MQRankSum=0.271;QD=8.47;ReadPosRankSum=1.009;VQSLOD=2.9262;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:10.52:0,11,62	0/0:1,0:1:3.01:0,3,32	0/0:17,0:6:15.04:0,15,195	0/0:9,0:3:3.47:0,3,26	0/0:5,0:5:6.02:0,6,80	./.	0/0:8,0:8:9.95:0,10,110	0/1:9,0:8:39.55:88,0,40	0/0:2,0:2:2.40:0,2,24	0/0:10,0:9:20.80:0,21,211	0/0:7,0:7:9.20:0,9,104	1/1:2,4:6:2.60:56,3,0	./.	0/0:4,0:4:5.84:0,6,39	0/0:3,0:2:6.02:0,6,80	0/0:4,0:3:9.03:0,9,119	0/0:7,0:7:6.66:0,7,55	0/0:3,0:3:9.03:0,9,119	0/1:3,2:5:25.77:75,0,26	1/1:2,0:2:3.01:34,3,0	0/0:8,5:13:3.03:0,3,15	0/0:6,0:6:2.74:0,3,13	./.	0/1:1,8:8:0:0,0,0	0/0:3,0:3:2.97:0,3,20	0/0:2,0:2:2.98:0,3,22	1/1:1,4:4:9.03:171,9,0	0/0:2,0:1:3.01:0,3,40
chr10	38322243	.	A	ACAA	2651.09	PASS	AC=16;AF=0.296;AN=54;BaseQRankSum=4.672;DP=324;FS=26.995;HRun=0;HaplotypeScore=70.9254;InbreedingCoeff=0.9086;MQ=69.85;MQ0=9;MQRankSum=-6.772;QD=30.13;ReadPosRankSum=1.492;VQSLOD=1.4453;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:14:33.10:436,33,0	0/0:2,0:2:6.02:0,6,84	0/0:13,0:9:24.08:0,24,379	0/0:12,0:10:4.67:0,5,222	./.	0/0:18,0:17:42.14:0,42,607	0/0:8,0:8:18.06:0,18,277	0/0:27,0:25:71.68:0,72,1030	1/1:11,0:11:26.96:296,27,0	0/0:7,0:7:18.06:0,18,287	0/0:5,0:4:9.03:0,9,117	0/0:13,0:13:36.58:0,37,523	1/1:9,0:9:27.03:321,27,0	1/1:14,0:14:39.12:514,39,0	1/1:9,0:9:27.06:338,27,0	1/1:11,0:11:27.09:361,27,0	1/1:8,0:8:24.08:328,24,0	0/0:6,0:6:9.03:0,9,133	0/0:12,0:10:27.09:0,27,408	0/0:9,0:8:21.07:0,21,315	0/0:46,0:42:78.23:0,78,1151	1/1:10,0:10:21.07:258,21,0	0/0:4,0:4:12.04:0,12,180	0/0:14,0:13:33.07:0,33,446	0/0:10,0:10:24.07:0,24,344	0/0:14,0:12:27.07:0,27,402	0/0:5,0:4:12.04:0,12,177	0/0:2,0:2:6.02:0,6,93
chr10	38326331	.	AT	A	6828.38	PASS	AB=1.000;AC=37;AF=0.661;AN=56;BaseQRankSum=13.185;DP=568;FS=0.000;HRun=10;HaplotypeScore=132.1673;InbreedingCoeff=0.8940;MQ=64.98;MQ0=5;MQRankSum=2.157;QD=17.97;ReadPosRankSum=2.838;VQSLOD=3.8247;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,15:17:41.95:358,42,0	1/1:0,15:15:32.98:285,33,0	0/0:28,0:10:3.95:0,4,110	0/1:21,0:8:13.95:14,0,71	0/0:31,0:31:69.07:0,69,708	1/1:4,24:28:65.97:567,66,0	1/1:0,9:9:15:129,15,0	1/1:7,14:17:35.98:307,36,0	0/0:16,0:16:39.61:0,40,398	1/1:1,22:23:65.21:534,65,0	1/1:6,24:30:77.76:646,78,0	1/1:2,11:14:37.23:292,37,0	0/0:23,0:23:62.98:0,63,619	0/0:18,0:19:51.14:0,51,557	0/0:11,0:11:27.06:0,27,288	0/0:23,0:23:54.54:0,55,567	0/0:19,0:19:41.50:0,42,451	1/1:7,11:18:29.79:246,30,0	1/1:3,7:10:20.97:177,21,0	1/1:7,26:33:75.09:608,75,0	1/1:2,9:11:20.98:178,21,0	0/0:18,0:18:45.01:0,45,449	1/1:1,21:23:53.23:427,53,0	1/1:3,10:14:15.78:215,16,0	1/1:0,15:15:38.99:336,39,0	1/1:2,22:25:68.14:556,68,0	1/1:2,26:30:71.30:596,71,0	1/1:1,20:21:41.94:357,42,0
chr10	38328490	.	GTGTGTGTTTA	G	3824.10	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=2.579;DP=590;FS=69.977;HRun=0;HaplotypeScore=195.8441;InbreedingCoeff=0.2371;MQ=51.15;MQ0=11;MQRankSum=4.134;QD=12.30;ReadPosRankSum=2.900;VQSLOD=0.5178;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:49,0:49:99:549,0,1812	0/1:10,0:10:32.61:33,0,58	0/0:22,0:13:38.54:0,39,589	0/0:20,0:11:31.11:0,31,484	0/0:26,0:26:48.47:0,48,889	0/0:17,0:17:6.91:0,7,83	0/1:34,0:34:99:390,0,331	0/1:14,0:12:61.79:160,0,62	0/0:26,0:26:55.74:0,56,1248	0/1:24,0:23:99:236,0,532	0/0:14,0:14:15.05:0,15,268	1/1:19,0:18:8.86:390,9,0	0/0:19,0:18:30.94:0,31,825	0/0:18,0:18:33.11:0,33,513	0/0:24,0:23:43.26:0,43,750	0/0:22,0:22:48.67:0,49,1091	0/0:30,0:30:75.46:0,75,1691	0/1:17,0:16:99:155,0,190	1/1:7,13:20:36.89:762,37,0	1/1:3,12:14:6.02:152,6,0	1/1:21,0:21:14.77:238,15,0	0/0:28,0:28:37.24:0,37,709	0/0:8,0:8:3:0,3,25	0/1:26,0:25:0.34:0,0,0	0/1:23,0:23:99:205,0,208	0/1:25,0:25:99:383,0,514	1/1:13,1:14:6.27:171,6,0	0/0:5,0:5:6.02:0,6,74
chr10	38328492	.	GTGTGTTTA	G	4259.94	PASS	AB=0.949;AC=21;AF=0.375;AN=56;BaseQRankSum=2.355;DP=572;FS=77.242;HRun=0;HaplotypeScore=175.5652;InbreedingCoeff=0.2560;MQ=52.47;MQ0=11;MQRankSum=3.611;QD=13.31;ReadPosRankSum=4.116;VQSLOD=1.3849;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:47,0:47:99:549,0,1240	0/1:8,1:9:19.19:77,0,19	0/0:23,0:14:41.55:0,42,649	0/0:19,0:10:29.86:0,30,481	0/0:23,0:23:45.35:0,45,792	0/1:17,0:17:2.17:61,0,2	0/1:33,0:33:71.89:502,0,72	0/1:12,0:10:27.15:161,0,27	0/0:27,0:27:60.67:0,61,1156	0/1:24,0:23:99:269,0,228	0/0:14,0:14:11.67:0,12,85	1/1:16,2:17:30.09:547,30,0	0/0:19,0:18:30.93:0,31,661	0/0:19,0:19:35.93:0,36,525	0/0:24,0:23:39.93:0,40,633	0/0:22,0:22:48.66:0,49,894	0/0:29,0:29:71.57:0,72,1443	0/1:17,0:16:34.53:191,0,35	1/1:19,0:19:38.21:651,38,0	1/1:15,0:14:6.02:100,6,0	1/1:18,0:18:14.87:238,15,0	0/0:28,0:28:37.11:0,37,639	0/1:7,0:7:0:0,0,0	0/1:7,18:24:0:0,0,0	0/1:22,0:22:82.14:236,0,82	0/1:23,1:24:99:519,0,220	1/1:13,0:13:14.08:160,14,0	0/0:5,0:5:5.36:0,5,21
chr10	38328494	.	GTGTTTA	G	5072.40	PASS	AB=1.000;AC=32;AF=0.571;AN=56;BaseQRankSum=2.904;DP=541;FS=44.051;HRun=0;HaplotypeScore=154.5333;InbreedingCoeff=0.7384;MQ=53.57;MQ0=11;MQRankSum=2.491;QD=16.36;ReadPosRankSum=4.551;VQSLOD=2.4507;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:47,0:47:99:557,0,678	1/1:8,0:8:2.98:52,3,0	0/0:24,0:15:44.52:0,45,721	0/0:19,0:10:29.86:0,30,481	0/0:23,0:23:48.57:0,49,766	1/1:16,1:17:8.63:97,9,0	1/1:29,3:32:60.20:763,60,0	0/1:8,0:6:2.93:202,0,3	0/0:27,0:27:60.20:0,60,992	1/1:23,0:22:23.45:374,23,0	1/1:13,0:13:2.88:15,3,0	1/1:14,0:13:27.56:444,28,0	0/0:19,0:18:24.35:0,24,501	0/0:19,0:19:33.98:0,34,449	0/0:24,0:23:39.93:0,40,590	0/0:24,0:24:48.61:0,49,795	0/0:29,0:29:71.56:0,72,1216	1/1:15,1:15:20.83:314,21,0	1/1:14,0:14:39.11:597,39,0	1/1:13,0:12:6.02:85,6,0	1/1:16,0:16:17.93:258,18,0	0/0:23,0:23:38.11:0,38,616	0/1:6,0:6:0:0,0,0	0/1:23,0:22:0:0,0,0	1/1:20,1:21:26.17:378,26,0	1/1:23,0:23:33.31:672,33,0	1/1:2,9:11:13.28:226,13,0	1/1:5,0:5:5.84:36,6,0
chr10	38328496	.	GTTTA	G	5744.65	PASS	AB=1.000;AC=33;AF=0.611;AN=54;BaseQRankSum=1.837;DP=523;FS=20.747;HRun=0;HaplotypeScore=134.4445;InbreedingCoeff=0.7250;MQ=54.56;MQ0=11;MQRankSum=3.043;QD=18.59;ReadPosRankSum=3.799;VQSLOD=2.7810;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:47,0:47:99:704,0,182	1/1:2,6:8:3.48:38,3,0	0/0:24,0:15:43.94:0,44,715	0/0:20,0:11:32.87:0,33,550	0/0:22,0:22:46.67:0,47,723	1/1:3,12:15:6.91:100,7,0	1/1:24,7:31:60.67:1009,61,0	1/1:3,5:6:0.02:202,0,0	0/0:27,0:27:58.96:0,59,835	1/1:3,18:21:36.03:508,36,0	1/1:4,8:12:3.01:59,3,0	1/1:12,0:12:27.09:402,27,0	0/1:19,0:18:0.06:0,0,380	0/0:19,0:19:35.60:0,36,454	0/0:24,0:23:32.93:0,33,588	0/0:23,0:23:27.48:0,27,670	0/0:28,0:28:66.77:0,67,1010	1/1:13,1:13:22.01:328,22,0	1/1:14,0:14:39.58:541,40,0	1/1:13,0:12:6.02:71,6,0	1/1:16,0:16:17.40:258,17,0	0/0:23,0:23:38.14:0,38,591	./.	0/1:19,0:18:0.06:0,0,0	1/1:19,1:20:30.07:452,30,0	1/1:5,19:24:56.99:807,57,0	1/1:10,0:10:12.04:145,12,0	1/1:0,5:5:6.02:120,6,0
chr10	38328729	.	AG	A	12569.28	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=18.346;DP=651;FS=0.296;HRun=1;HaplotypeScore=134.1681;InbreedingCoeff=0.9819;MQ=84.24;MQ0=0;MQRankSum=-7.209;QD=32.56;ReadPosRankSum=3.075;VQSLOD=4.5715;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,45:48:99:1585,132,0	1/1:0,8:8:24.08:297,24,0	0/0:27,0:27:81.23:0,81,1194	0/0:17,0:17:39.68:0,40,622	0/0:19,0:19:54.15:0,54,810	1/1:0,19:19:51.16:632,51,0	1/1:0,27:27:72.23:892,72,0	1/1:0,30:30:90.23:1085,90,0	0/0:30,0:30:90.31:0,90,1436	1/1:2,15:16:45.13:546,45,0	1/1:0,14:14:36.11:446,36,0	1/1:0,27:27:81.25:1003,81,0	0/0:24,0:24:69.24:0,69,1103	0/0:34,0:34:99:0,102,1607	0/0:46,0:46:99:0,138,2153	0/0:30,0:30:90.31:0,90,1434	0/0:16,0:16:48.08:0,48,736	1/1:0,16:16:45.06:525,45,0	1/1:2,17:19:44.75:623,45,0	1/1:0,18:18:51.16:631,51,0	1/1:1,29:30:72.04:891,72,0	0/0:22,0:22:60.20:0,60,949	1/1:0,14:14:42.13:520,42,0	1/1:0,25:25:69.22:855,69,0	1/1:1,22:23:60.19:743,60,0	1/1:0,27:27:81.25:1003,81,0	1/1:18,0:18:5.65:69,6,0	1/1:0,6:6:18.06:223,18,0
chr10	38328730	.	GA	G	12621.33	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=18.497;DP=657;FS=0.000;HRun=2;HaplotypeScore=135.5704;InbreedingCoeff=0.9819;MQ=85.14;MQ0=0;MQRankSum=-5.950;QD=32.45;ReadPosRankSum=3.099;VQSLOD=4.3225;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:48,0:48:99:1585,132,0	1/1:8,0:8:24.08:297,24,0	0/0:28,0:28:81.23:0,81,1136	0/0:18,0:18:41.93:0,42,554	0/0:19,0:19:54.17:0,54,787	1/1:19,0:19:51.16:632,51,0	1/1:27,0:27:72.23:892,72,0	1/1:31,0:31:90.23:1085,90,0	0/0:30,0:30:90.30:0,90,1349	1/1:17,0:16:45.13:546,45,0	1/1:14,0:14:36.11:446,36,0	1/1:27,0:27:81.25:1003,81,0	0/0:24,0:24:69.23:0,69,1034	0/0:34,0:34:99:0,102,1528	0/0:46,0:46:99:0,138,2030	0/0:30,0:30:90.28:0,90,1311	0/0:17,0:17:48.15:0,48,699	1/1:16,0:16:45.06:525,45,0	1/1:19,0:19:51.16:632,51,0	1/1:18,0:18:51.16:631,51,0	1/1:31,0:31:75.05:928,75,0	0/0:22,0:22:63.12:0,63,824	1/1:14,0:14:42.13:520,42,0	1/1:26,0:26:69.22:855,69,0	1/1:22,0:22:60.19:743,60,0	1/1:28,0:28:81.25:1003,81,0	1/1:0,18:18:5.65:75,6,0	1/1:6,0:6:18.06:223,18,0
chr10	38329704	.	TGAAGGATGAG	T	25197.37	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=17.470;DP=704;FS=8.063;HRun=0;HaplotypeScore=235.2919;InbreedingCoeff=0.9837;MQ=89.07;MQ0=0;MQRankSum=-18.577;QD=65.45;ReadPosRankSum=0.263;VQSLOD=3.4557;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,18:22:48.16:1427,48,0	1/1:2,12:14:33.11:1068,33,0	0/0:41,0:41:99:0,107,5036	0/0:31,0:30:78.59:0,79,3614	0/0:28,0:28:75.26:0,75,3836	1/1:2,19:21:48.16:1553,48,0	1/1:3,19:22:45.15:1456,45,0	1/1:6,17:23:51.15:1377,51,0	0/0:30,0:30:87.27:0,87,4047	1/1:2,20:22:60.21:1918,60,0	1/1:1,21:22:54.10:1557,54,0	1/1:3,17:20:42.14:1359,42,0	0/0:38,0:38:99:0,114,5868	0/0:32,0:32:96.33:0,96,4964	0/0:30,0:30:87.30:0,87,4555	0/0:20,0:20:57.17:0,57,2590	0/0:30,0:30:87.30:0,87,4488	1/1:4,11:15:30.10:971,30,0	1/1:11,14:25:39.11:1174,39,0	1/1:4,23:27:69.24:1957,69,0	1/1:7,20:26:42.14:1238,42,0	0/0:39,0:39:99:0,108,5324	1/1:3,10:13:30.10:863,30,0	1/1:6,15:21:20.80:647,21,0	1/1:2,26:28:63.22:2007,63,0	1/1:8,22:30:69.24:2197,69,0	1/1:3,28:31:69.24:2233,69,0	1/1:0,2:2:6.02:194,6,0
chr10	38330814	.	G	GC	4219.75	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=10.064;DP=300;FS=13.463;HRun=1;HaplotypeScore=188.2895;InbreedingCoeff=0.8933;MQ=82.95;MQ0=0;MQRankSum=-4.693;QD=26.71;ReadPosRankSum=1.298;VQSLOD=2.7699;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:17,2:19:23.72:410,24,0	1/1:3,0:3:3.01:42,3,0	0/0:15,0:15:39.53:0,40,469	0/0:12,0:12:26.64:0,27,275	0/0:13,0:13:20.98:0,21,272	1/1:8,0:8:18.06:253,18,0	1/1:6,0:6:12.04:173,12,0	1/1:5,5:10:18.05:230,18,0	0/0:15,0:15:36.12:0,36,466	1/1:15,0:15:31.82:463,32,0	1/1:7,0:7:16.82:223,17,0	1/1:5,0:5:13.29:169,13,0	0/0:21,0:21:57.11:0,57,688	0/0:10,0:10:24.08:0,24,311	0/0:24,0:24:63.19:0,63,802	0/0:15,0:15:45.15:0,45,583	0/0:10,0:9:18.02:0,18,215	1/1:5,2:7:12.04:170,12,0	1/1:5,0:5:9.03:113,9,0	1/1:8,1:9:20.46:265,20,0	1/1:6,0:6:15.05:218,15,0	0/0:7,0:7:18.05:0,18,219	1/1:8,2:10:24.96:354,25,0	1/1:5,0:5:12.04:169,12,0	1/1:12,0:12:2.02:272,2,0	1/1:12,0:12:26.54:288,27,0	1/1:15,2:17:19.61:322,20,0	1/1:0,2:2:6.02:86,6,0
chr10	38330898	.	TAGAAAGAA	T	1631.87	PASS	AB=0.917;AC=16;AF=0.348;AN=46;BaseQRankSum=-2.194;DP=158;FS=13.430;HRun=0;HaplotypeScore=69.3945;InbreedingCoeff=0.5340;MQ=62.23;MQ0=2;MQRankSum=-2.729;QD=34.72;ReadPosRankSum=2.386;VQSLOD=1.9296;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:4,0:4:38.66:39,0,39	0/0:4,0:4:8.95:0,9,176	./.	./.	1/1:0,3:3:9.03:215,9,0	0/0:3,0:3:8.39:0,8,75	0/0:3,0:3:5.93:0,6,49	0/0:6,0:5:6.02:0,6,71	1/1:1,4:5:9.03:224,9,0	0/0:12,0:12:11.66:0,12,110	0/0:9,0:9:12.01:0,12,124	0/0:2,0:2:3.89:0,4,37	1/1:0,2:2:6.02:149,6,0	0/1:4,1:4:96.83:140,0,97	1/1:1,2:3:6.02:149,6,0	1/1:4,5:9:13.34:370,13,0	1/1:3,2:5:3.01:33,3,0	./.	0/0:4,0:4:3.01:0,3,44	0/0:11,0:11:15.05:0,15,234	./.	1/1:5,6:11:21.07:473,21,0	0/0:5,0:5:5.04:0,5,34	./.	0/0:14,0:14:25.33:0,25,682	0/0:7,0:7:16.63:0,17,132	0/0:9,0:8:12.04:0,12,209	0/0:2,0:2:4.74:0,5,17
chr10	38330944	.	GA	G	3506.44	PASS	AB=0.867;AC=41;AF=0.759;AN=54;BaseQRankSum=6.116;DP=292;FS=21.112;HRun=4;HaplotypeScore=133.0619;InbreedingCoeff=0.2038;MQ=36.74;MQ0=5;MQRankSum=-4.367;QD=13.04;ReadPosRankSum=-0.481;VQSLOD=1.4524;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,2:10:14.69:131,15,0	1/1:0,7:6:18.05:215,18,0	0/0:6,0:3:9.03:0,9,122	0/0:4,0:1:3.01:0,3,36	0/1:14,2:16:9.66:10,0,381	1/1:3,4:6:17.35:150,17,0	1/1:1,4:5:12.03:139,12,0	1/1:11,11:20:35.47:371,35,0	0/1:14,3:17:83.21:83,0,336	1/1:6,10:16:43.55:409,44,0	1/1:3,3:6:14.71:153,15,0	1/1:9,1:11:22:97,22,0	0/1:6,2:8:51.07:51,0,149	0/1:15,1:15:9.81:10,0,439	0/1:14,3:17:65.48:65,0,405	0/0:11,0:11:9.96:0,10,204	0/1:12,1:13:31.82:32,0,223	1/1:3,1:4:11.04:69,11,0	1/1:5,3:6:17.22:151,17,0	1/1:10,3:13:27.03:145,27,0	./.	0/1:13,4:17:99:108,0,215	1/1:4,2:6:14.22:109,14,0	1/1:2,0:1:2.68:11,3,0	1/1:2,10:12:35.45:382,35,0	1/1:12,6:18:49.98:338,50,0	1/1:6,8:12:23.07:198,23,0	1/1:1,3:4:11.62:80,12,0
chr10	38330945	.	A	ACG	2126.12	PASS	AB=0.789;AC=18;AF=0.333;AN=54;BaseQRankSum=8.836;DP=298;FS=23.190;HRun=0;HaplotypeScore=149.4511;InbreedingCoeff=-0.1976;MQ=36.58;MQ0=5;MQRankSum=-4.352;QD=13.21;ReadPosRankSum=0.213;VQSLOD=1.7100;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:9,0:10:15.82:75,0,16	0/0:7,0:6:17.30:0,17,92	0/0:7,0:3:9.03:0,9,147	0/0:4,0:1:2.96:0,3,19	0/0:17,0:17:33.35:0,33,564	0/1:5,2:6:42.35:81,0,42	0/0:5,0:5:11.57:0,12,64	0/0:20,0:18:44.92:0,45,351	0/0:18,0:18:20.43:0,20,504	0/1:12,4:16:99:161,0,145	0/1:5,1:6:32.06:32,0,83	1/1:2,9:11:26.51:402,27,0	0/0:9,0:9:6.61:0,7,237	0/0:18,0:17:44.49:0,44,631	0/0:18,0:18:15.36:0,15,573	0/0:12,0:12:30.03:0,30,371	0/1:13,0:13:26.30:26,0,281	0/1:1,3:4:3.15:151,0,3	0/1:6,2:6:54.32:85,0,54	0/1:6,7:13:47.69:328,0,48	./.	0/1:17,0:17:10.01:10,0,458	0/1:3,3:6:30.03:136,0,30	1/1:1,1:1:3.01:50,3,0	0/1:10,2:12:65.92:66,0,116	0/1:7,11:18:51.07:515,0,51	0/1:9,5:12:99:129,0,100	0/1:3,1:4:29.70:40,0,30
chr10	38330946	.	A	AGG	2852.55	PASS	AB=0.972;AC=22;AF=0.407;AN=54;BaseQRankSum=8.576;DP=311;FS=20.935;HRun=0;HaplotypeScore=158.4357;InbreedingCoeff=-0.1613;MQ=36.23;MQ0=5;MQRankSum=-2.680;QD=13.78;ReadPosRankSum=-0.051;VQSLOD=1.6356;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,6:10:14.73:166,15,0	0/0:7,0:6:17.46:0,17,99	0/0:7,0:3:9.03:0,9,147	0/0:5,0:1:3:0,3,27	0/0:18,0:18:0.98:0,1,505	0/1:7,0:6:47.01:87,0,47	0/0:5,0:5:11.67:0,12,67	0/1:23,0:21:47.11:70,0,47	0/1:17,1:18:20.10:20,0,490	0/1:16,0:16:99:220,0,132	0/1:6,0:6:50.27:50,0,52	1/1:11,0:11:27.08:428,27,0	0/0:9,0:9:2.28:0,2,227	0/0:19,0:18:44.02:0,44,629	0/0:19,0:19:12.49:0,12,566	0/0:13,0:13:29.15:0,29,344	0/1:11,4:15:99:174,0,294	0/1:4,0:4:4.25:153,0,4	1/1:8,0:6:5.10:118,5,0	0/1:11,0:13:3.98:367,0,4	./.	0/1:18,0:18:41.75:42,0,387	0/1:6,0:6:14.47:147,0,14	1/1:2,0:1:3.01:53,3,0	0/1:12,0:12:71.58:72,0,131	0/1:20,0:20:48.58:638,0,49	0/1:14,0:12:29.87:167,0,30	0/1:4,0:4:31.65:43,0,32
chr10	38330970	.	AAAGG	A	3509.13	PASS	AB=0.990;AC=35;AF=0.625;AN=56;BaseQRankSum=3.914;DP=437;FS=37.837;HRun=0;HaplotypeScore=224.7008;InbreedingCoeff=-0.3277;MQ=35.63;MQ0=1;MQRankSum=-5.388;QD=8.64;ReadPosRankSum=-2.306;VQSLOD=1.4908;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:16,0:18:66.11:74,0,66	0/1:8,0:8:4.08:70,0,4	0/0:18,0:6:14.87:0,15,248	0/0:13,0:3:6.49:0,6,108	0/1:20,0:20:19.40:19,0,449	0/1:9,1:10:46.21:151,0,46	0/1:8,0:8:10.88:105,0,11	0/1:31,0:29:39.66:377,0,40	0/1:22,0:22:66.32:66,0,476	1/1:20,2:21:20.59:377,21,0	1/1:4,1:5:8.83:56,9,0	1/1:21,0:21:19.36:266,19,0	0/1:15,0:15:93.10:93,0,237	0/1:23,0:23:67.63:68,0,524	0/1:25,0:25:43.50:43,0,565	0/1:15,0:15:17.01:17,0,350	0/1:17,0:17:96.38:96,0,244	0/1:9,0:9:20.64:118,0,21	1/1:19,0:18:46.81:349,47,0	1/1:14,0:14:0.46:171,0,0	1/1:8,0:8:17.73:127,18,0	0/1:16,0:16:12.36:12,0,337	1/1:10,0:10:23.77:142,24,0	1/1:6,0:5:10.46:59,10,0	0/1:19,0:20:82.19:82,0,122	0/1:22,2:24:43.29:346,0,43	0/1:14,0:12:16.28:87,0,16	1/1:3,2:5:12.45:135,12,0
chr10	38330971	.	AAGGC	A	2824.64	PASS	AB=0.952;AC=34;AF=0.607;AN=56;BaseQRankSum=5.793;DP=438;FS=32.474;HRun=0;HaplotypeScore=226.9206;InbreedingCoeff=-0.3845;MQ=35.68;MQ0=2;MQRankSum=-5.060;QD=6.94;ReadPosRankSum=-2.619;VQSLOD=1.0112;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:18,0:18:13.72:111,0,14	0/1:9,0:8:14.99:83,0,15	0/0:18,0:6:14.97:0,15,230	0/0:13,0:3:6.16:0,6,85	0/1:17,4:21:99:176,0,248	0/1:10,0:10:20.76:61,0,21	0/1:8,0:8:8.66:57,0,9	0/1:31,0:29:2.86:62,0,3	0/1:22,0:22:99:215,0,393	1/1:22,0:21:24.25:147,24,0	1/1:5,0:5:3.16:8,3,0	1/1:21,0:21:1.86:74,2,0	0/1:11,4:15:99:266,0,225	0/1:20,3:23:99:225,0,433	0/1:22,3:25:99:237,0,413	0/1:14,1:15:93.19:93,0,281	0/1:17,0:17:99:267,0,209	0/1:9,0:9:8.41:67,0,8	0/1:20,0:18:8.26:88,0,8	1/1:14,0:14:21.52:145,22,0	1/1:8,0:8:12.87:96,13,0	0/1:12,4:16:99:105,0,247	1/1:10,0:10:0.39:45,0,0	1/1:6,0:5:8.34:65,8,0	0/1:20,0:20:29.65:30,0,167	0/1:24,0:24:5.20:121,0,5	0/1:13,0:11:15.15:55,0,15	1/1:5,0:5:11.82:82,12,0
chr10	38330974	.	G	GA	959.84	PASS	AB=0.885;AC=17;AF=0.304;AN=56;BaseQRankSum=4.102;DP=432;FS=4.148;HRun=0;HaplotypeScore=207.9259;InbreedingCoeff=-0.4708;MQ=35.81;MQ0=1;MQRankSum=-3.249;QD=3.50;ReadPosRankSum=-4.667;VQSLOD=2.4318;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:14,1:17:69.90:70,0,83	0/1:7,2:8:58.61:79,0,59	0/0:18,0:6:14.94:0,15,160	0/0:15,0:4:5.43:0,5,51	0/1:20,1:21:73.75:74,0,161	0/0:10,0:10:1.31:0,1,148	0/1:6,2:8:25.49:25,0,81	0/0:29,0:28:62.57:0,63,328	0/1:20,2:22:99:119,0,155	0/1:19,3:21:59.89:60,0,258	0/0:5,0:5:8.94:0,9,64	0/0:20,1:21:12.92:0,13,336	0/1:13,2:15:70.10:82,0,70	0/1:22,1:23:38.92:39,0,179	0/1:23,0:23:59.23:59,0,155	0/1:14,0:14:44.10:44,0,87	0/1:15,3:18:82.85:210,0,83	0/1:6,3:9:50.38:50,0,86	0/0:20,0:19:49.13:0,49,254	0/0:14,0:14:29.87:0,30,181	0/0:8,0:8:17.70:0,18,114	0/1:15,0:15:15.44:15,0,158	0/1:9,1:10:2.55:3,0,143	0/1:3,2:5:32.03:60,0,32	0/1:16,2:19:15.19:15,0,235	0/1:20,4:24:99:106,0,297	0/0:13,0:11:20.47:0,20,127	0/0:5,0:5:0.39:0,0,62
chr10	38331277	.	A	ATAT	8358.64	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=17.390;DP=659;FS=11.189;HRun=0;HaplotypeScore=134.6386;InbreedingCoeff=0.9796;MQ=82.54;MQ0=0;MQRankSum=-16.314;QD=44.23;ReadPosRankSum=-4.014;VQSLOD=5.1564;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,120,2074	1/1:3,5:8:15.05:285,15,0	0/0:24,0:24:69.22:0,69,1095	0/0:22,0:22:54.13:0,54,839	0/0:32,0:32:75.06:0,75,1265	1/1:5,20:25:66.14:1309,66,0	1/1:2,19:21:59.99:917,60,0	0/0:39,0:39:99:0,111,1901	0/0:26,0:26:78.25:0,78,1348	1/1:3,16:19:54.17:1080,54,0	1/1:3,6:9:18.06:329,18,0	1/1:6,22:28:75:1259,75,0	0/0:28,0:28:78.27:0,78,1364	0/0:28,0:28:84.26:0,84,1425	0/0:27,0:27:81.28:0,81,1429	0/0:39,0:39:99:0,111,1958	0/0:37,0:37:99:0,111,1928	1/1:2,12:14:39.07:763,39,0	0/0:18,0:18:54.19:0,54,953	0/0:14,0:14:30.10:0,30,529	0/0:43,0:43:99:0,126,2192	0/0:19,0:19:39.13:0,39,688	1/1:4,4:8:18.02:261,18,0	1/1:7,18:25:47.69:681,48,0	1/1:4,6:10:17.99:304,18,0	1/1:4,16:20:54.18:1085,54,0	0/0:32,0:32:96.28:0,96,1602	1/1:1,1:2:6:86,6,0
chr10	38331280	.	T	TAG	5805.77	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=15.560;DP=670;FS=7.958;HRun=0;HaplotypeScore=136.8544;InbreedingCoeff=0.9643;MQ=82.22;MQ0=0;MQRankSum=-15.546;QD=30.24;ReadPosRankSum=-0.748;VQSLOD=6.4984;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,126,1742	1/1:2,5:7:12.04:184,12,0	0/0:24,0:24:62.92:0,63,817	0/0:21,0:21:51.03:0,51,646	0/0:34,0:34:75.03:0,75,1055	1/1:9,17:26:48.06:712,48,0	1/1:10,15:25:42.13:642,42,0	0/0:38,0:38:99:0,99,1386	0/0:26,0:26:75.25:0,75,1075	1/1:4,16:20:57.19:875,57,0	1/1:3,6:9:15.05:219,15,0	1/1:5,20:25:51.16:745,51,0	0/0:29,0:29:81.27:0,81,1160	0/0:27,0:27:78.26:0,78,1118	0/0:28,0:28:78.26:0,78,1117	0/0:39,0:39:99:0,111,1553	0/0:39,0:39:99:0,114,1607	1/1:3,11:14:33.07:492,33,0	0/0:19,0:19:57.19:0,57,816	0/0:15,0:15:30.10:0,30,430	0/0:44,0:44:99:0,129,1842	0/0:19,0:19:39.13:0,39,558	1/1:3,5:8:12.02:201,12,0	1/1:8,16:24:27.52:415,28,0	1/1:7,5:12:27.09:453,27,0	1/1:7,14:21:57.13:821,57,0	0/0:33,0:33:93.30:0,93,1312	1/1:0,1:1:3.01:47,3,0
chr10	38331542	.	T	TAAA	4812.67	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=8.941;DP=569;FS=0.851;HRun=10;HaplotypeScore=167.8613;InbreedingCoeff=0.9542;MQ=72.52;MQ0=0;MQRankSum=-7.367;QD=26.01;ReadPosRankSum=-2.968;VQSLOD=1.3287;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:74.75:0,75,859	1/1:1,3:4:6.02:96,6,0	0/0:15,0:16:17.81:0,18,218	0/0:10,0:10:14.63:0,15,140	0/0:38,0:39:71.18:0,71,1075	1/1:6,12:19:57.01:863,57,0	1/1:8,10:20:47.93:666,48,0	0/0:30,0:33:74.65:0,75,865	0/0:21,0:21:57.10:0,57,681	1/1:14,12:26:56.93:886,57,0	1/1:4,9:13:33.09:571,33,0	1/1:4,0:20:17.75:41,18,0	0/0:19,0:19:51.10:0,51,608	0/0:22,0:23:56.98:0,57,675	0/0:23,0:23:60.09:0,60,715	0/0:21,0:21:57.15:0,57,693	0/0:30,0:30:78.20:0,78,949	1/1:2,2:4:9.02:141,9,0	0/0:18,0:18:42.05:0,42,510	0/0:29,0:29:50.90:0,51,589	0/0:15,0:16:19.22:0,19,265	0/0:17,0:17:45.12:0,45,535	1/1:8,0:25:20.94:83,21,0	1/1:1,0:14:15.90:62,16,0	1/1:7,5:12:26.88:330,27,0	1/1:13,11:26:60.10:958,60,0	0/0:33,0:32:71.93:0,72,862	1/1:0,2:2:6.02:115,6,0
chr10	38331595	.	C	CAAAAT	24017.45	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-11.026;DP=587;FS=11.333;HRun=0;HaplotypeScore=120.5304;InbreedingCoeff=0.9645;MQ=79.42;MQ0=0;MQRankSum=-11.382;QD=66.16;ReadPosRankSum=-0.209;VQSLOD=5.6660;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,22:28:69.24:1971,69,0	1/1:0,5:6:12.04:361,12,0	0/0:16,0:16:33.11:0,33,591	0/0:21,0:21:41.75:0,42,715	0/0:30,0:30:75.23:0,75,1427	1/1:3,18:22:54.19:1625,54,0	1/1:7,15:22:45.15:1319,45,0	1/1:16,20:36:75.23:2075,75,0	0/0:21,0:21:54.17:0,54,1052	1/1:9,20:31:72.25:2048,72,0	1/1:1,10:11:30.10:899,30,0	1/1:3,16:20:51.17:1486,51,0	0/0:23,0:23:66.23:0,66,1328	0/0:29,0:29:81.28:0,81,1631	0/0:21,0:21:57.18:0,57,1112	0/0:21,0:21:54.19:0,54,1064	0/0:22,0:22:51.17:0,51,1025	1/1:2,2:4:6.02:181,6,0	1/1:12,16:29:69.24:1936,69,0	1/1:4,20:26:60.16:1664,60,0	1/1:1,9:10:30.10:871,30,0	0/0:20,0:20:57.20:0,57,1136	1/1:7,16:24:60.20:1660,60,0	1/1:3,15:18:48.16:1407,48,0	1/1:2,15:17:51.18:1533,51,0	1/1:12,14:30:51.15:1330,51,0	1/1:7,17:23:51.18:1471,51,0	1/1:0,2:4:6.02:181,6,0
chr10	38331942	.	AAC	A	8003.13	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=15.488;DP=662;FS=5.057;HRun=0;HaplotypeScore=155.0429;InbreedingCoeff=0.9646;MQ=70.42;MQ0=0;MQRankSum=-5.946;QD=36.38;ReadPosRankSum=2.361;VQSLOD=6.3481;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,102,1283	1/1:1,11:12:36.09:466,36,0	0/0:19,0:19:57.15:0,57,1021	0/0:12,0:12:1.30:0,1,567	0/0:19,0:19:53.37:0,53,1041	1/1:1,11:12:32.47:407,32,0	1/1:3,19:22:60.15:741,60,0	0/0:27,0:27:78.04:0,78,726	0/0:38,0:38:99:0,114,2130	1/1:1,23:24:69.21:872,69,0	1/1:1,4:5:12.04:153,12,0	1/1:2,21:23:66.19:831,66,0	0/0:23,0:23:66.21:0,66,1223	0/0:26,0:26:78.27:0,78,1487	0/0:31,0:31:93.32:0,93,1771	0/0:32,0:32:96.33:0,96,1855	0/0:34,0:34:99:0,99,1897	1/1:4,29:33:93.13:1219,93,0	0/0:33,0:33:38.69:0,39,812	0/0:16,0:16:45.12:0,45,510	0/0:48,0:48:99:0,141,1499	0/0:16,0:16:42.14:0,42,811	1/1:2,16:18:51.14:647,51,0	1/1:3,23:26:68.91:955,69,0	1/1:0,14:14:42.13:556,42,0	1/1:2,20:22:63.16:788,63,0	0/0:26,0:26:78.19:0,78,835	1/1:0,9:9:27.09:370,27,0
chr10	38331946	.	G	GT	7386.39	PASS	AB=1.000;AC=25;AF=0.446;AN=56;BaseQRankSum=15.571;DP=646;FS=2.607;HRun=2;HaplotypeScore=140.4674;InbreedingCoeff=0.9358;MQ=70.71;MQ0=0;MQRankSum=-5.730;QD=32.68;ReadPosRankSum=1.595;VQSLOD=4.3931;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,114,1412	1/1:2,10:12:36.02:404,36,0	0/0:20,0:20:54.15:0,54,655	0/1:11,0:11:7.58:8,0,315	0/0:18,0:18:51.12:0,51,615	1/1:0,12:12:33.10:415,33,0	1/1:1,19:20:60.14:698,60,0	0/0:27,0:27:75.24:0,75,929	0/0:38,0:38:99:0,102,1252	1/1:1,23:24:69.18:808,69,0	1/1:2,4:6:14.62:145,15,0	1/1:3,20:23:69.16:799,69,0	0/0:20,0:20:57.65:0,58,707	0/0:22,0:22:66.21:0,66,818	0/0:29,0:29:87.26:0,87,1066	0/0:34,0:34:99:0,99,1215	0/0:33,0:33:96.30:0,96,1190	1/1:3,29:32:92.48:1137,92,0	0/0:28,0:28:69.21:0,69,845	0/0:17,0:17:42.13:0,42,519	0/0:51,0:51:99:0,144,1745	0/0:16,0:16:45.13:0,45,546	1/1:0,17:17:51.14:622,51,0	1/1:1,23:24:60.71:735,61,0	1/1:1,14:15:45.11:537,45,0	1/1:1,20:21:63.12:733,63,0	0/0:26,0:26:75.24:0,75,929	1/1:0,9:9:27.09:345,27,0
chr10	38333680	.	AAG	A	6789.56	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=0.484;DP=616;FS=13.922;HRun=0;HaplotypeScore=90.0900;InbreedingCoeff=0.9595;MQ=80.08;MQ0=1;MQRankSum=-1.684;QD=38.14;ReadPosRankSum=5.265;VQSLOD=5.9307;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:78.27:0,78,1430	0/0:10,0:10:27.09:0,27,492	0/0:23,0:23:64.05:0,64,1054	0/0:12,0:11:0.67:0,1,448	1/1:2,27:29:75.25:1075,75,0	0/0:23,0:23:63.20:0,63,1116	0/0:25,0:25:72.25:0,72,1310	0/0:30,0:30:81.28:0,81,1471	1/1:1,19:20:54.18:774,54,0	0/0:26,0:26:78.27:0,78,1431	0/0:30,0:30:87.30:0,87,1568	0/0:29,0:29:84.29:0,84,1539	1/1:0,27:27:72.24:1031,72,0	1/1:1,19:20:48.16:687,48,0	1/1:0,21:21:57.19:817,57,0	1/1:0,14:14:39.13:559,39,0	1/1:0,25:25:69.23:989,69,0	0/0:24,0:24:69.24:0,69,1264	0/0:19,0:19:54.19:0,54,982	0/0:21,0:21:63.19:0,63,1094	0/0:24,0:24:72.24:0,72,1296	1/1:0,22:21:60.20:859,60,0	0/0:15,0:15:45.14:0,45,791	0/0:22,0:22:66.23:0,66,1209	0/0:21,0:21:63.22:0,63,1147	0/0:30,0:30:84.28:0,84,1490	0/0:20,0:20:60.21:0,60,1099	0/0:7,0:7:21.07:0,21,385
chr10	38335738	.	AG	A	10195.84	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=7.813;DP=707;FS=0.592;HRun=1;HaplotypeScore=119.5899;InbreedingCoeff=0.9998;MQ=87.07;MQ0=0;MQRankSum=-6.439;QD=39.21;ReadPosRankSum=5.007;VQSLOD=4.3673;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,46:46:99:1754,126,0	0/0:14,0:14:42.14:0,42,668	0/0:24,0:24:66.20:0,66,977	0/0:24,0:24:70.37:0,70,956	1/1:0,16:16:48.16:671,48,0	0/0:21,0:21:63.21:0,63,1004	0/0:24,0:24:72.21:0,72,1101	0/0:31,0:31:93.09:0,93,1429	1/1:0,35:35:99:1426,102,0	0/0:24,0:24:72.24:0,72,1132	0/0:9,0:9:27.07:0,27,408	0/0:38,0:38:99:0,114,1823	1/1:1,35:36:99:1444,105,0	1/1:0,35:35:93.31:1294,93,0	1/1:0,33:33:90.30:1258,90,0	1/1:0,23:23:66.22:923,66,0	1/1:0,23:23:63.21:881,63,0	0/0:24,0:24:72.25:0,72,1151	0/0:22,0:22:66.20:0,66,1028	0/0:16,0:16:48.16:0,48,767	0/0:56,0:56:99:0,169,2650	1/1:0,13:13:39.13:545,39,0	0/0:15,0:15:45.14:0,45,694	0/0:31,0:31:93.27:0,93,1459	0/0:11,0:11:33.11:0,33,524	0/0:22,0:22:66.23:0,66,1054	0/0:27,0:27:81.24:0,81,1239	0/0:14,0:14:42.14:0,42,671
chr10	38336731	.	TTGCTTGGTTTTGTGAC	T	9130.23	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=12.815;DP=598;FS=5.282;HRun=0;HaplotypeScore=282.5009;InbreedingCoeff=0.9694;MQ=94.15;MQ0=0;MQRankSum=-12.868;QD=80.09;ReadPosRankSum=2.518;VQSLOD=4.2079;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,126,8229	1/1:4,4:8:11.42:537,11,0	0/0:32,0:32:54.16:0,54,2999	0/0:25,0:25:57.15:0,57,3656	0/0:18,0:18:42.14:0,42,2724	1/1:4,7:11:21.07:941,21,0	1/1:7,9:16:24.08:1076,24,0	0/0:20,0:20:42.14:0,42,2023	0/0:21,0:21:54.17:0,54,3444	1/1:3,13:16:39.13:1748,39,0	1/1:1,5:6:12.04:538,12,0	0/0:23,0:23:63.22:0,63,3806	0/0:21,0:21:57.20:0,57,3589	0/0:31,0:31:78.27:0,78,5439	0/0:27,0:27:72.23:0,72,4866	0/0:29,0:29:78.27:0,78,5422	0/0:30,0:30:84.29:0,84,5500	1/1:7,6:13:15.05:645,15,0	0/0:16,0:16:33.10:0,33,1652	0/0:18,0:18:42.14:0,42,2718	0/0:32,0:32:90.31:0,90,6317	0/0:24,0:24:69.24:0,69,4592	0/0:20,0:20:48.16:0,48,3365	0/0:28,0:28:72.25:0,72,5203	1/1:9,14:23:42.14:1873,42,0	1/1:6,12:18:36.11:1503,36,0	0/0:19,0:19:45.15:0,45,2952	1/1:1,2:3:6.02:269,6,0
chr10	38339458	.	AAAAC	A	2859.74	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.212;DP=761;FS=0.000;HRun=0;HaplotypeScore=125.5585;InbreedingCoeff=0.9938;MQ=62.53;MQ0=4;MQRankSum=-2.045;QD=32.13;ReadPosRankSum=3.709;VQSLOD=3.5039;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,117,2845	0/0:18,0:18:48.16:0,48,1191	0/0:29,0:20:51.17:0,51,1046	0/0:18,0:14:25.69:0,26,522	0/0:28,0:28:78.10:0,78,1720	0/0:20,0:20:54.17:0,54,1253	0/0:26,0:25:61.45:0,61,1424	0/0:32,0:32:72.24:0,72,1681	0/0:22,0:22:48.16:0,48,1157	0/0:41,0:41:99:0,102,2404	0/0:28,0:28:78.27:0,78,1932	1/1:4,27:31:60.21:1012,60,0	0/0:20,0:20:51.17:0,51,1159	0/0:22,0:22:57.19:0,57,1323	0/0:37,0:37:96.33:0,96,2372	0/0:31,0:31:75.20:0,75,1690	0/0:32,0:31:75.26:0,75,1786	0/0:24,0:24:54.16:0,54,1245	0/0:19,0:19:39.12:0,39,776	0/0:28,0:28:72.23:0,72,1648	0/0:30,0:30:81.26:0,81,1830	0/0:32,0:32:84.27:0,84,1939	1/1:4,22:26:66.18:1080,66,0	1/1:10,22:32:54.18:910,54,0	0/0:27,0:27:75.26:0,75,1795	0/0:25,0:25:69.22:0,69,1465	0/0:30,0:30:81.28:0,81,1916	0/0:9,0:9:15.05:0,15,372
chr10	38339950	.	TC	T	6738.91	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=13.585;DP=647;FS=3.320;HRun=1;HaplotypeScore=62.7994;InbreedingCoeff=0.9989;MQ=82.16;MQ0=0;MQRankSum=-2.189;QD=37.65;ReadPosRankSum=1.148;VQSLOD=5.3600;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,123,1937	1/1:0,8:8:21.03:272,21,0	0/0:21,0:21:63.21:0,63,968	0/0:19,0:18:45.15:0,45,702	0/0:29,0:29:84.29:0,84,1330	1/1:0,22:22:57.19:797,57,0	1/1:0,26:26:69.23:965,69,0	0/0:32,0:32:96.32:0,96,1514	0/0:19,0:19:57.19:0,57,909	1/1:0,33:33:93.29:1268,93,0	1/1:1,7:8:24.08:335,24,0	0/0:18,0:18:54.15:0,54,813	0/0:26,0:26:75.26:0,75,1192	0/0:28,0:28:84.27:0,84,1314	0/0:27,0:27:81.28:0,81,1292	0/0:11,0:11:33.10:0,33,504	0/0:20,0:20:60.20:0,60,959	1/1:0,16:16:36.12:503,36,0	0/0:25,0:25:75.26:0,75,1188	0/0:21,0:21:63.21:0,63,1001	0/0:26,0:26:75.26:0,75,1199	0/0:25,0:25:75.23:0,75,1148	0/0:20,0:20:60.20:0,60,959	0/0:30,0:29:90.29:0,90,1416	1/1:0,27:27:75.16:1005,75,0	1/1:0,28:28:84.28:1174,84,0	0/0:30,0:30:90.31:0,90,1435	1/1:0,11:11:30.10:420,30,0
chr10	38340041	.	TA	T	4941.23	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=17.616;DP=649;FS=0.350;HRun=1;HaplotypeScore=98.1575;InbreedingCoeff=0.9962;MQ=89.50;MQ0=0;MQRankSum=-1.936;QD=33.84;ReadPosRankSum=3.566;VQSLOD=4.6236;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,148,2334	1/1:0,9:9:18.06:221,18,0	0/0:23,0:23:61.06:0,61,988	0/0:28,0:28:81.23:0,81,1228	0/0:33,0:33:96.31:0,96,1511	1/1:2,19:21:60.17:728,60,0	1/1:0,23:23:63.19:775,63,0	0/0:29,0:29:87.29:0,87,1369	0/0:26,0:26:78.24:0,78,1217	1/1:0,23:23:69.22:847,69,0	1/1:1,18:19:51.16:628,51,0	0/0:26,0:26:78.24:0,78,1200	0/0:27,0:27:81.25:0,81,1260	0/0:21,0:21:63.21:0,63,1005	0/0:24,0:24:72.25:0,72,1149	0/0:19,0:19:57.19:0,57,902	0/0:20,0:20:60.20:0,60,957	1/1:0,11:11:33.10:408,33,0	0/0:20,0:20:60.19:0,60,931	0/0:27,0:27:78.27:0,78,1246	0/0:28,0:28:84.24:0,84,1314	0/0:24,0:24:72.22:0,72,1122	0/0:20,0:20:60.18:0,60,905	0/0:28,0:28:84.29:0,84,1342	1/1:0,14:14:33.10:405,33,0	1/1:1,19:20:60.19:742,60,0	0/0:31,0:30:93.30:0,93,1449	1/1:0,6:6:15.05:186,15,0
chr10	38340434	.	T	TG	6401.13	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=5.492;DP=661;FS=7.858;HRun=3;HaplotypeScore=142.3675;InbreedingCoeff=0.9992;MQ=79.78;MQ0=0;MQRankSum=-9.903;QD=37.22;ReadPosRankSum=0.366;VQSLOD=2.9386;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,132,1581	1/1:0,8:8:24.08:335,24,0	0/0:17,0:16:45.12:0,45,524	0/0:22,0:22:59.66:0,60,657	0/0:35,0:35:99:0,102,1187	1/1:3,14:17:48.16:666,48,0	1/1:2,22:24:69.19:931,69,0	0/0:24,0:24:66.18:0,66,765	0/0:26,0:26:72.22:0,72,864	1/1:2,22:24:69.23:958,69,0	1/1:4,10:14:27:350,27,0	0/0:26,0:26:75.21:0,75,888	0/0:22,0:22:66.19:0,66,780	0/0:12,0:12:33.10:0,33,396	0/0:31,0:31:90.26:0,90,1068	0/0:27,0:27:72.21:0,72,854	0/0:27,0:27:78.21:0,78,911	1/1:2,20:22:54.18:754,54,0	0/0:25,0:25:66.19:0,66,783	0/0:21,0:21:63.18:0,63,742	0/0:36,0:36:99:0,99,1165	0/0:23,0:23:66.20:0,66,792	0/0:18,0:18:50.99:0,51,559	0/0:25,0:25:72.18:0,72,822	1/1:3,16:19:45.15:629,45,0	1/1:5,31:36:99:1442,108,0	0/0:25,0:25:75.22:0,75,888	1/1:1,7:8:24.08:335,24,0
chr10	38340462	.	CACCG	C	6579.77	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=8.827;DP=655;FS=4.945;HRun=0;HaplotypeScore=194.8829;InbreedingCoeff=0.9978;MQ=77.92;MQ0=0;MQRankSum=-14.483;QD=44.16;ReadPosRankSum=0.080;VQSLOD=4.9721;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,111,2826	1/1:1,7:8:24.08:430,24,0	0/0:12,0:12:27.09:0,27,630	0/0:21,0:22:37.55:0,38,643	0/0:33,0:33:87.30:0,87,2257	1/1:2,12:14:42.12:702,42,0	1/1:6,10:16:39.11:684,39,0	0/0:26,0:26:72.22:0,72,1642	0/0:30,0:30:81.26:0,81,2064	1/1:3,22:25:69.20:1223,69,0	1/1:1,10:11:24.07:412,24,0	0/0:28,0:28:75.26:0,75,1898	0/0:32,0:32:84.27:0,84,2152	0/0:17,0:17:51.17:0,51,1288	0/0:29,0:29:81.26:0,81,2077	0/0:26,0:26:72.22:0,72,1733	0/0:38,0:38:99:0,114,2937	1/1:4,16:20:48.07:761,48,0	0/0:17,0:17:48.16:0,48,1130	0/0:21,0:21:60.18:0,60,1418	0/0:45,0:45:99:0,126,3313	0/0:25,0:25:69.22:0,69,1708	0/0:11,0:11:30.10:0,30,720	0/0:28,0:28:81.26:0,81,2092	1/1:3,16:19:54.05:895,54,0	1/1:6,23:29:69.20:1177,69,0	0/0:23,0:23:63.20:0,63,1574	1/1:2,5:7:17.99:297,18,0
chr10	38340763	.	T	TA	818.34	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-5.468;DP=705;FS=0.646;HRun=10;HaplotypeScore=70.4065;InbreedingCoeff=0.9653;MQ=76.91;MQ0=0;MQRankSum=-1.100;QD=20.46;ReadPosRankSum=1.267;VQSLOD=4.5918;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,34:40:66.80:913,67,0	0/0:19,0:19:44.83:0,45,358	0/0:19,0:19:26.68:0,27,214	0/0:16,0:16:26.02:0,26,218	0/0:36,0:37:82.88:0,83,667	0/0:26,0:26:44.75:0,45,513	0/0:22,0:22:62.87:0,63,508	0/0:32,0:32:77.86:0,78,634	0/0:21,0:21:53.85:0,54,433	0/0:36,0:36:95.84:0,96,780	0/0:22,1:24:11.98:0,12,280	0/0:23,0:23:53.84:0,54,432	0/0:27,0:27:74.84:0,75,606	0/0:26,1:27:39.92:0,40,534	0/0:27,0:27:74.88:0,75,609	0/0:31,0:31:86.88:0,87,711	0/0:35,0:36:90.51:0,91,818	0/0:11,0:13:34:0,34,253	0/0:28,0:28:62.83:0,63,509	0/0:21,0:22:53.73:0,54,432	0/0:17,0:17:37.54:0,38,314	0/0:21,0:22:61.49:0,61,497	0/0:27,0:28:55.95:0,56,449	0/0:28,0:28:55.14:0,55,564	0/0:25,0:25:59.90:0,60,492	0/0:31,0:31:74.87:0,75,613	0/0:19,0:18:50.92:0,51,419	0/0:9,0:8:23.97:0,24,197
chr10	38343185	.	T	TAC	4876.99	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-13.076;DP=859;FS=1.864;HRun=0;HaplotypeScore=101.5711;InbreedingCoeff=0.9925;MQ=71.57;MQ0=0;MQRankSum=-0.674;QD=47.81;ReadPosRankSum=2.899;VQSLOD=5.9473;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:70,0:70:99:0,208,3026	0/0:10,0:10:27.07:0,27,376	0/0:17,0:17:37.53:0,38,456	0/0:9,0:10:20.98:0,21,227	0/0:28,0:28:78.26:0,78,1140	0/0:19,0:19:57.19:0,57,838	0/0:40,0:40:99:0,117,1723	0/0:30,0:30:87.28:0,87,1247	0/0:33,0:33:93.31:0,93,1361	0/0:37,0:37:99:0,105,1543	0/0:14,0:14:42.10:0,42,593	1/1:1,28:29:78.27:1455,78,0	0/0:33,0:33:99:0,99,1378	0/0:38,0:38:99:0,114,1656	0/0:49,0:48:99:0,135,1954	0/0:35,0:35:99:0,99,1457	0/0:33,0:33:99:0,99,1458	0/0:18,0:18:54.16:0,54,757	0/0:23,0:23:60.19:0,60,864	0/0:21,0:21:60.19:0,60,864	0/0:79,0:79:99:0,226,3265	0/0:29,0:29:87.25:0,87,1257	1/1:0,20:20:48.16:894,48,0	1/1:4,49:53:99:2528,135,0	0/0:28,0:28:78.26:0,78,1147	0/0:32,0:32:96.32:0,96,1411	0/0:24,0:24:69.22:0,69,997	0/0:6,0:6:15.05:0,15,221
chr10	38343561	.	A	ACTT	27715.98	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-14.085;DP=731;FS=2.492;HRun=0;HaplotypeScore=92.0742;InbreedingCoeff=0.9990;MQ=75.03;MQ0=0;MQRankSum=-7.568;QD=55.65;ReadPosRankSum=2.164;VQSLOD=7.0293;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,29:31:81.15:1762,81,0	0/0:9,0:9:27.09:0,27,464	0/0:13,0:13:32.87:0,33,465	0/0:20,0:21:51.27:0,51,711	1/1:3,25:29:72.17:1583,72,0	0/0:31,0:31:93.28:0,93,1570	0/0:24,0:24:69.19:0,69,1126	1/1:3,19:24:66.17:1356,66,0	1/1:3,24:29:63.22:1487,63,0	0/0:35,0:35:99:0,102,1723	0/0:11,0:11:33.10:0,33,549	1/1:1,27:28:72.25:1701,72,0	1/1:0,35:36:99:2337,99,0	1/1:1,28:31:66.23:1559,66,0	1/1:3,31:36:96.24:2155,96,0	1/1:1,25:26:69.24:1630,69,0	1/1:0,31:31:63.09:1383,63,0	0/0:34,0:34:99:0,102,1726	1/1:6,17:24:69:1366,69,0	1/1:2,19:22:57.06:1171,57,0	1/1:2,50:52:99:2772,120,0	1/1:2,19:24:54.19:1263,54,0	1/1:0,9:11:27:535,27,0	1/1:2,37:38:87.29:2056,87,0	0/0:24,0:24:72.22:0,72,1200	0/0:24,0:24:72.24:0,72,1243	1/1:1,23:25:72.18:1600,72,0	0/0:7,0:7:21.04:0,21,312
chr10	38344166	.	C	CT	2684.06	PASS	AB=0.543;AC=9;AF=0.161;AN=56;BaseQRankSum=-3.060;DP=588;FS=3.854;HRun=9;HaplotypeScore=81.0500;InbreedingCoeff=0.9042;MQ=72.90;MQ0=0;MQRankSum=0.088;QD=23.14;ReadPosRankSum=-1.968;VQSLOD=3.7332;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:77.96:0,78,677	0/0:13,0:13:35.97:0,36,307	0/0:10,0:9:23.97:0,24,203	0/0:9,0:9:17.73:0,18,143	0/0:28,0:28:68.92:0,69,588	0/0:25,0:25:68.96:0,69,595	0/0:11,0:11:23.99:0,24,208	1/1:5,15:20:45.10:486,45,0	0/0:13,0:13:35.98:0,36,313	0/0:29,0:29:77.98:0,78,677	0/0:20,0:20:50.98:0,51,443	0/0:26,0:26:65.97:0,66,569	0/0:12,0:12:26.99:0,27,234	0/0:22,0:22:62.97:0,63,543	0/0:13,0:13:32.99:0,33,286	0/0:18,0:18:50.99:0,51,442	0/0:30,0:30:74.93:0,75,641	0/0:33,0:33:86.89:0,87,750	1/1:6,22:28:66.16:721,66,0	1/1:4,23:27:63.17:695,63,0	0/1:3,16:19:3.98:417,0,4	0/0:19,0:19:44.96:0,45,391	0/0:29,0:30:79.76:0,80,674	0/0:14,0:14:29.96:0,30,255	0/0:26,1:27:39.26:0,39,564	0/0:23,0:23:59.96:0,60,516	1/1:4,18:21:48.13:531,48,0	0/0:16,0:16:32.97:0,33,286
chr10	38345030	.	GTTTT	G	3806.74	PASS	AB=1.000;AC=16;AF=0.286;AN=56;BaseQRankSum=5.755;DP=561;FS=7.108;HRun=4;HaplotypeScore=152.6669;InbreedingCoeff=0.7583;MQ=55.95;MQ0=14;MQRankSum=-9.672;QD=22.26;ReadPosRankSum=2.553;VQSLOD=-0.0283;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:13,8:21:47.77:517,48,0	0/0:10,0:10:27.04:0,27,548	0/0:35,0:10:27.76:0,28,360	0/0:39,0:14:14.58:0,15,119	1/1:34,1:35:68.69:798,69,0	0/0:18,0:17:45.11:0,45,1044	0/0:19,0:19:53.94:0,54,1013	0/0:23,0:23:39.62:0,40,239	1/1:15,0:15:36.11:442,36,0	0/0:25,0:24:69.19:0,69,1500	0/0:21,0:21:51.53:0,52,1198	0/0:20,0:20:56.74:0,57,793	0/1:16,0:16:4.35:274,0,4	1/1:14,0:13:3.66:298,4,0	1/1:22,0:22:15.23:523,15,0	1/1:21,0:21:30.68:634,31,0	1/1:18,0:18:5.60:247,6,0	0/0:14,0:15:27.54:0,28,578	0/0:20,0:19:29.44:0,29,121	0/0:17,0:16:23.40:0,23,113	0/0:8,0:8:0.62:0,1,17	0/1:9,0:8:36.28:74,0,36	0/0:19,0:19:46.84:0,47,547	0/0:14,0:14:36.14:0,36,485	0/0:23,0:22:51.57:0,52,1257	0/0:25,0:25:70.95:0,71,1605	0/0:22,0:21:25:0,25,103	0/0:11,0:11:27.09:0,27,596
chr10	38345031	.	TTTTG	T	7089.59	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=8.185;DP=559;FS=2.146;HRun=0;HaplotypeScore=140.6335;InbreedingCoeff=0.9676;MQ=55.78;MQ0=14;MQRankSum=-9.801;QD=27.16;ReadPosRankSum=-1.298;VQSLOD=4.7590;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:21:36.19:289,36,0	0/0:10,0:10:16.87:0,17,339	0/0:40,0:11:22.31:0,22,232	0/0:39,0:13:12.09:0,12,81	1/1:7,28:35:87.01:1328,87,0	0/0:18,0:17:37.80:0,38,681	0/0:19,0:19:26.89:0,27,565	1/1:23,0:23:49.92:299,50,0	1/1:4,11:15:36.12:656,36,0	0/0:24,0:23:55.70:0,56,903	0/0:21,0:21:24.95:0,25,785	0/0:20,0:20:55.39:0,55,495	1/1:6,10:16:30.02:498,30,0	1/1:4,11:14:32.97:535,33,0	1/1:9,13:22:51.07:877,51,0	1/1:2,18:20:56.93:1018,57,0	1/1:6,11:17:30.03:472,30,0	0/0:16,0:16:8.78:0,9,344	1/1:20,0:19:51.23:329,51,0	1/1:17,0:16:37.34:231,37,0	1/1:9,0:9:14.71:111,15,0	1/1:7,1:7:17.78:207,18,0	0/0:18,0:18:7.30:0,7,271	0/0:14,0:14:14.47:0,14,257	0/0:23,0:22:27.94:0,28,777	0/0:25,0:25:42.94:0,43,960	1/1:22,0:21:40.67:240,41,0	0/0:11,0:11:27.02:0,27,368
chr10	38345033	.	TTG	T	5829.68	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=10.308;DP=553;FS=0.365;HRun=0;HaplotypeScore=126.9210;InbreedingCoeff=0.8908;MQ=55.94;MQ0=14;MQRankSum=-9.360;QD=21.43;ReadPosRankSum=1.175;VQSLOD=5.4058;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:20:29.78:232,30,0	0/0:10,0:10:26.88:0,27,224	0/0:39,0:12:10.50:0,11,174	0/0:36,0:12:11.08:0,11,78	1/1:35,0:35:73.63:689,74,0	0/0:17,0:16:42.01:0,42,417	0/0:20,0:20:47.56:0,48,455	1/1:2,18:20:57.12:721,57,0	1/1:15,0:15:36.06:347,36,0	0/0:23,0:22:61.48:0,61,541	0/0:22,0:22:46.35:0,46,483	0/0:20,0:20:51.69:0,52,255	1/1:15,0:15:29.44:257,29,0	1/1:14,0:14:22.21:254,22,0	1/1:22,0:22:43.65:436,44,0	1/1:20,0:20:54.10:531,54,0	1/1:17,0:17:22.89:220,23,0	0/1:17,0:17:9.23:9,0,159	1/1:2,17:18:53.97:631,54,0	1/1:1,16:16:42.02:558,42,0	1/1:8,2:9:15.03:185,15,0	1/1:8,0:7:1.65:97,2,0	0/0:18,0:18:24.37:0,24,147	0/0:14,0:14:16.49:0,16,122	0/0:23,0:22:49.65:0,50,490	0/0:25,0:25:64.51:0,65,639	1/1:2,20:22:45.09:661,45,0	0/0:12,0:12:26.99:0,27,238
chr10	38345034	.	TG	T	4356.06	PASS	AB=0.994;AC=30;AF=0.536;AN=56;BaseQRankSum=12.325;DP=545;FS=0.000;HRun=1;HaplotypeScore=125.2244;InbreedingCoeff=0.6765;MQ=56.99;MQ0=13;MQRankSum=-9.381;QD=13.49;ReadPosRankSum=2.435;VQSLOD=4.1118;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:18:29.40:249,29,0	0/0:10,0:10:24.91:0,25,141	0/1:39,1:13:26.36:26,0,110	0/0:37,0:12:10.82:0,11,76	1/1:35,0:35:56.26:535,56,0	0/0:17,0:16:41.10:0,41,281	0/0:19,0:19:47.08:0,47,336	1/1:19,0:19:56.90:483,57,0	1/1:15,1:16:29.87:278,30,0	0/0:23,0:22:30.22:0,30,309	0/0:21,0:21:50.15:0,50,324	0/0:20,0:20:21.30:0,21,125	1/1:15,0:15:27.07:200,27,0	1/1:14,0:13:11.10:195,11,0	1/1:21,0:21:28.46:330,28,0	1/1:20,0:20:53.17:427,53,0	1/1:18,0:18:8.02:153,8,0	0/1:17,0:17:18.26:18,0,84	1/1:17,2:18:53.91:484,54,0	1/1:17,0:16:41.94:361,42,0	1/1:10,0:9:14.81:122,15,0	0/1:8,0:7:19.40:83,0,19	0/0:16,0:16:3.22:0,3,65	0/1:14,0:14:8.42:8,0,39	0/0:23,0:22:55.09:0,55,350	0/0:24,0:24:68.48:0,68,474	1/1:22,0:21:45.01:402,45,0	0/0:12,0:12:26.59:0,27,176
chr10	38345044	.	T	TG	4571.75	PASS	AB=1.000;AC=37;AF=0.661;AN=56;BaseQRankSum=5.677;DP=538;FS=16.723;HRun=0;HaplotypeScore=119.5449;InbreedingCoeff=0.6484;MQ=57.50;MQ0=11;MQRankSum=-2.553;QD=13.06;ReadPosRankSum=6.420;VQSLOD=4.4657;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,16:18:26.71:376,27,0	0/1:12,0:12:10.15:10,0,30	0/0:35,0:14:1.85:0,2,190	0/0:31,0:8:2.09:0,2,14	1/1:29,6:35:78.78:559,79,0	0/0:17,0:17:6.14:0,6,162	0/0:18,0:18:9.06:0,9,158	1/1:23,0:23:59.43:361,59,0	1/1:14,4:18:26.87:278,27,0	0/0:25,0:24:15.19:0,15,204	0/0:22,0:22:5.53:0,6,250	1/1:17,0:17:28.75:187,29,0	1/1:9,5:14:29.11:238,29,0	1/1:15,2:16:39.94:259,40,0	1/1:15,8:23:58.94:496,59,0	1/1:21,1:22:51.95:324,52,0	1/1:15,7:22:47.12:370,47,0	0/1:17,0:17:0.46:0,0,63	1/1:18,0:17:20.02:192,20,0	1/1:17,0:16:40.64:231,41,0	1/1:4,0:10:8.78:54,9,0	1/1:3,3:5:13.80:116,14,0	1/1:15,0:15:28.89:152,29,0	1/1:13,0:13:30.36:138,30,0	0/0:20,0:19:2.06:0,2,112	0/0:20,0:20:0.98:0,1,158	1/1:21,0:21:43.01:231,43,0	0/1:10,0:10:0.57:1,0,42
chr10	38345230	.	G	GA	4271.21	PASS	AB=0.614;AC=21;AF=0.375;AN=56;BaseQRankSum=-10.301;DP=633;FS=6.288;HRun=12;HaplotypeScore=83.3799;InbreedingCoeff=0.4044;MQ=81.53;MQ0=2;MQRankSum=2.313;QD=14.68;ReadPosRankSum=-0.335;VQSLOD=5.2269;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,1:32:53.51:0,54,518	0/1:3,6:9:19.78:150,0,20	0/0:46,0:34:23.29:0,23,153	0/0:28,0:21:12.61:0,13,70	0/0:24,0:26:66.71:0,67,471	1/1:1,17:18:20.24:358,20,0	0/1:10,15:26:48.74:209,0,49	0/1:11,15:28:35.79:362,0,36	0/0:21,0:22:49.42:0,49,343	1/1:6,18:24:7.84:364,8,0	1/1:8,8:16:3.63:184,4,0	0/0:5,0:18:22.39:0,22,65	0/0:13,0:16:23.89:0,24,147	0/0:12,0:15:29.76:0,30,181	0/0:25,1:28:40.47:0,40,436	0/0:16,0:17:34.83:0,35,246	0/0:31,0:33:84.61:0,85,603	1/1:1,17:18:45.07:438,45,0	0/1:10,14:27:54.21:385,0,54	1/1:7,24:32:68.91:644,69,0	0/1:5,8:13:3.88:128,0,4	0/0:19,1:20:14.58:0,15,261	0/0:4,0:18:26.46:0,26,76	0/0:5,0:20:26.46:0,26,76	0/1:7,12:20:51.63:183,0,52	1/1:6,21:28:4.77:391,5,0	0/1:4,14:18:23.64:279,0,24	1/1:4,9:14:5.18:197,5,0
chr10	38345660	.	T	TCAGG	24840.16	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-10.144;DP=647;FS=1.446;HRun=0;HaplotypeScore=108.2005;InbreedingCoeff=0.9986;MQ=86.71;MQ0=0;MQRankSum=-4.978;QD=57.77;ReadPosRankSum=4.140;VQSLOD=6.1123;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,32:43:96.33:2539,96,0	0/0:15,0:15:39.13:0,39,740	0/0:21,0:21:45.14:0,45,777	0/0:30,0:30:71.98:0,72,1285	1/1:1,23:25:56.88:1534,57,0	0/0:28,0:28:81.25:0,81,1474	0/0:28,0:28:81.26:0,81,1505	1/1:6,22:28:78.23:1951,78,0	1/1:3,16:19:45.11:1152,45,0	0/0:20,0:20:57.18:0,57,1022	0/0:13,0:13:36.11:0,36,652	1/1:1,25:26:60.16:1535,60,0	1/1:6,17:23:48.16:1294,48,0	1/1:2,27:30:72.25:1898,72,0	1/1:4,22:26:54.19:1458,54,0	1/1:2,14:16:33.07:826,33,0	1/1:3,29:32:78.27:2104,78,0	0/0:26,0:25:78.27:0,78,1479	1/1:2,14:16:48.16:1264,48,0	1/1:6,16:27:45.11:1065,45,0	1/1:5,32:41:76.87:2068,77,0	1/1:7,12:19:33.07:738,33,0	1/1:3,9:14:21.03:503,21,0	1/1:3,24:27:66.23:1781,66,0	0/0:10,0:10:30.10:0,30,570	0/0:19,0:19:54.16:0,54,936	1/1:4,14:18:42.14:1130,42,0	0/0:7,0:7:21.07:0,21,398
chr10	38346776	.	AAAC	A	1086.32	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=6.539;DP=446;FS=0.572;HRun=0;HaplotypeScore=92.0183;InbreedingCoeff=0.7867;MQ=61.62;MQ0=4;MQRankSum=-4.604;QD=13.09;ReadPosRankSum=2.223;VQSLOD=3.2361;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:27.08:0,27,512	0/0:3,0:3:9.03:0,9,189	0/1:31,0:15:4.78:5,0,335	0/0:36,0:18:41.41:0,41,628	0/0:19,0:18:27:0,27,394	0/0:19,0:19:54.07:0,54,1007	0/0:16,0:16:48.14:0,48,806	0/0:16,0:16:38.53:0,39,657	0/0:13,0:12:33.94:0,34,375	0/0:25,0:25:75.22:0,75,1376	0/0:11,0:11:33.11:0,33,619	1/1:8,7:14:27.96:367,28,0	0/0:11,0:11:2.27:0,2,60	0/0:11,0:11:29.90:0,30,306	0/0:17,0:17:35.58:0,36,414	0/0:10,0:7:15.02:0,15,173	0/0:16,0:11:29.98:0,30,343	0/0:17,0:17:48.16:0,48,1009	0/0:18,0:18:49.68:0,50,853	0/0:10,0:10:27.08:0,27,480	0/0:7,0:7:17.88:0,18,218	0/0:11,0:11:30.08:0,30,402	1/1:11,5:16:42.32:435,42,0	1/1:16,5:21:46.77:424,47,0	0/0:21,0:21:60.20:0,60,1233	0/0:22,0:22:60.16:0,60,1039	0/0:13,0:13:11.24:0,11,218	0/0:10,0:10:30.06:0,30,526
chr10	38346779	.	C	CA	1727.97	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=6.530;DP=444;FS=11.459;HRun=8;HaplotypeScore=79.0014;InbreedingCoeff=0.8843;MQ=62.93;MQ0=5;MQRankSum=-3.364;QD=11.08;ReadPosRankSum=0.710;VQSLOD=1.4302;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:22.37:0,22,188	0/0:5,0:5:8.99:0,9,82	0/0:30,1:13:6.32:0,6,150	0/0:40,0:20:18.23:0,18,259	1/1:9,8:16:26.44:281,26,0	0/0:18,0:18:48.02:0,48,439	0/0:17,0:17:42.02:0,42,384	0/0:13,0:13:29.16:0,29,251	1/1:6,7:12:18.70:243,19,0	0/0:26,0:26:69.03:0,69,629	0/0:11,0:11:33.02:0,33,302	1/1:14,0:13:4.19:62,4,0	1/1:2,8:10:6.02:66,6,0	1/1:6,5:11:15.04:173,15,0	1/1:3,14:17:27.08:311,27,0	1/1:6,4:7:11.97:122,12,0	1/1:9,7:10:24.03:262,24,0	0/0:16,0:16:48.03:0,48,439	0/0:17,0:17:41.51:0,42,394	0/0:11,0:11:20.34:0,20,187	0/0:7,0:7:5.98:0,6,50	1/1:4,8:12:4.48:216,4,0	1/1:16,0:16:9.70:81,10,0	1/1:20,0:20:20.30:121,20,0	0/0:22,0:22:60.03:0,60,549	0/0:21,0:21:54.02:0,54,494	0/0:11,0:11:13.44:0,13,133	0/0:10,0:10:27.01:0,27,247
chr10	38346783	.	A	AAT	1597.83	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=6.254;DP=441;FS=0.000;HRun=0;HaplotypeScore=88.8176;InbreedingCoeff=0.7666;MQ=66.13;MQ0=6;MQRankSum=-4.782;QD=26.19;ReadPosRankSum=3.339;VQSLOD=4.7195;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:27.07:0,27,359	0/0:8,0:8:24.04:0,24,269	0/0:36,0:16:5.29:0,5,279	0/0:43,0:22:49.10:0,49,575	0/0:14,0:13:21.59:0,22,115	0/0:18,0:18:51.16:0,51,751	0/0:17,0:17:51.13:0,51,710	0/0:12,0:12:32.88:0,33,466	0/0:12,0:11:25.62:0,26,117	0/0:26,0:26:78.12:0,78,1116	0/0:12,0:12:33.11:0,33,491	1/1:8,6:13:38.49:504,38,0	0/0:8,0:9:2.58:0,3,8	0/0:7,0:7:17.02:0,17,79	0/0:17,0:17:25.98:0,26,114	0/1:10,0:7:6.31:6,0,54	0/0:15,0:9:15.54:0,16,51	0/0:16,0:16:48.16:0,48,726	0/0:18,0:18:13.83:0,14,688	0/0:11,0:11:20.95:0,21,280	0/0:5,0:5:11.93:0,12,128	0/0:11,0:11:25.54:0,26,158	1/1:6,11:17:37.80:504,38,0	1/1:5,15:20:45.37:729,45,0	0/0:22,0:22:63.20:0,63,935	0/0:19,0:19:57.19:0,57,844	0/0:11,0:11:16.75:0,17,172	0/0:9,0:9:27.09:0,27,406
chr10	38346798	.	C	CAGAACA	1765.17	PASS	AB=0.893;AC=10;AF=0.179;AN=56;BaseQRankSum=0.634;DP=463;FS=19.432;HRun=0;HaplotypeScore=131.1117;InbreedingCoeff=0.4702;MQ=66.42;MQ0=6;MQRankSum=-3.944;QD=21.01;ReadPosRankSum=-3.670;VQSLOD=1.4815;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:10,0:10:72.55:73,0,82	0/0:10,0:10:24.08:0,24,590	0/0:38,0:18:26.68:0,27,468	0/0:41,0:18:26.97:0,27,440	0/0:15,0:14:25.78:0,26,340	0/0:24,0:24:60.19:0,60,1381	0/0:16,0:16:45.13:0,45,982	0/1:14,0:14:13.93:99,0,14	0/0:10,0:9:6.15:0,6,202	0/0:27,0:27:80.46:0,80,1675	0/0:19,0:19:51.15:0,51,1041	0/0:15,0:14:35.84:0,36,296	0/0:8,0:8:6:0,6,75	0/1:10,0:10:19.56:20,0,145	0/0:12,0:12:22.60:0,23,269	0/0:11,0:8:20.74:0,21,286	0/0:15,0:9:10.93:0,11,135	0/0:22,0:22:54.14:0,54,1064	1/1:4,11:17:27.43:717,27,0	1/1:3,9:14:27.01:680,27,0	1/1:6,0:6:4.88:52,5,0	0/0:7,0:7:5.89:0,6,79	0/0:18,0:18:41.42:0,41,329	0/0:20,0:20:40.25:0,40,231	0/0:23,0:23:69.14:0,69,1365	0/0:20,0:20:60.19:0,60,1305	0/1:3,6:11:3.78:281,0,4	0/0:8,0:8:21.07:0,21,484
chr10	38346886	.	GA	G	2312.95	PASS	AB=0.923;AC=27;AF=0.519;AN=52;BaseQRankSum=1.357;DP=393;FS=47.727;HRun=9;HaplotypeScore=86.6187;InbreedingCoeff=0.8019;MQ=36.95;MQ0=35;MQRankSum=-3.314;QD=14.46;ReadPosRankSum=1.970;VQSLOD=0.5892;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,17:18:40.02:380,40,0	0/0:0,0:9:20.14:0,20,112	./.	0/0:21,0:1:0:0,0,0	1/1:6,4:9:12:109,12,0	0/0:9,0:24:41.41:0,41,220	0/1:6,1:12:12.46:12,0,48	1/1:5,8:12:24.01:219,24,0	1/1:1,6:7:18:164,18,0	0/0:9,0:20:47.34:0,47,254	0/0:7,0:15:23.45:0,23,150	0/0:10,0:9:1.86:0,2,38	1/1:1,5:5:15.01:136,15,0	1/1:4,7:11:21:191,21,0	1/1:1,10:11:27.01:247,27,0	1/1:3,11:13:33.02:301,33,0	1/1:4,12:15:29.93:274,30,0	0/0:7,0:14:6.57:0,7,31	1/1:3,4:4:12.01:110,12,0	1/1:7,7:11:4.49:122,4,0	./.	1/1:2,4:6:12:110,12,0	0/0:12,0:10:8.91:0,9,63	0/0:18,0:18:14.88:0,15,109	0/0:6,0:22:31.72:0,32,160	0/0:7,0:18:36.26:0,36,189	1/1:3,11:9:14.95:137,15,0	0/0:9,0:20:46.13:0,46,264
chr10	38347396	.	CAAGAG	C	1165.21	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=1.091;DP=512;FS=0.816;HRun=0;HaplotypeScore=122.4903;InbreedingCoeff=0.8821;MQ=72.45;MQ0=0;MQRankSum=-0.847;QD=40.18;ReadPosRankSum=0.785;VQSLOD=3.5901;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,25:29:63.21:1260,63,0	0/0:7,0:7:18.06:0,18,543	0/0:15,0:14:8.82:0,9,677	0/0:19,0:15:29.71:0,30,747	0/0:19,0:19:54.19:0,54,1454	0/0:33,0:33:96.31:0,96,2755	0/0:17,0:17:45.15:0,45,1303	0/0:20,0:20:54.18:0,54,1396	0/0:14,0:14:42.14:0,42,1205	0/0:20,0:20:57.19:0,57,1632	0/0:19,0:19:48.16:0,48,1385	0/0:6,0:6:9.03:0,9,242	0/0:20,0:20:57.20:0,57,1727	0/0:19,0:19:54.17:0,54,1551	0/0:14,0:14:33.11:0,33,932	0/0:15,0:15:30.10:0,30,910	0/0:21,0:21:57.20:0,57,1684	0/0:20,0:20:57.20:0,57,1623	0/0:21,0:21:51.17:0,51,1381	0/0:11,0:11:27.09:0,27,784	0/0:28,0:28:72.25:0,72,2178	0/0:13,0:13:36.11:0,36,967	0/0:10,0:10:21.07:0,21,637	0/0:20,0:20:42.61:0,43,1228	0/0:17,0:17:51.17:0,51,1460	0/0:19,0:19:57.20:0,57,1691	0/0:22,0:22:60.21:0,60,1797	0/0:23,0:23:66.23:0,66,1823
chr10	38347655	.	CTTTA	C	2317.41	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=8.575;DP=302;FS=9.058;HRun=0;HaplotypeScore=49.8213;InbreedingCoeff=0.9501;MQ=66.60;MQ0=1;MQRankSum=-1.732;QD=35.11;ReadPosRankSum=-0.389;VQSLOD=2.5387;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:33.11:0,33,890	0/0:2,0:2:6.02:0,6,162	0/0:13,0:9:21.03:0,21,422	0/0:16,0:12:20.72:0,21,545	0/0:13,0:12:36.09:0,36,849	0/0:11,0:11:33.11:0,33,890	0/0:9,0:9:27.09:0,27,726	1/1:2,17:19:45.02:730,45,0	0/0:4,0:4:12.04:0,12,323	0/0:10,0:10:30.09:0,30,735	0/0:15,0:15:45.14:0,45,1079	0/0:6,0:6:18.06:0,18,486	0/0:4,0:4:12.02:0,12,261	0/0:11,0:11:27.09:0,27,689	0/0:9,0:9:27.08:0,27,668	0/0:8,0:8:24.08:0,24,648	0/0:15,0:15:42.13:0,42,986	0/0:11,0:11:30.10:0,30,810	1/1:0,9:9:27.05:475,27,0	1/1:1,7:8:20.99:359,21,0	1/1:3,13:16:20.99:359,21,0	0/0:7,0:7:21.07:0,21,550	0/0:5,0:5:15.05:0,15,376	0/0:12,0:12:33.07:0,33,776	0/0:9,0:9:27.09:0,27,729	0/0:13,0:13:33.11:0,33,891	1/1:1,13:14:30.10:569,30,0	0/0:20,0:20:54.05:0,54,1331
chr10	38347948	.	T	TG	1243.49	PASS	AB=0.702;AC=19;AF=0.365;AN=52;BaseQRankSum=0.158;DP=389;FS=1.397;HRun=9;HaplotypeScore=50.8795;InbreedingCoeff=0.4934;MQ=50.73;MQ0=29;MQRankSum=0.047;QD=7.97;ReadPosRankSum=-0.122;VQSLOD=0.9007;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:15,2:20:2.92:18,3,0	0/0:2,0:2:3:0,3,26	./.	./.	0/0:14,0:13:32.97:0,33,282	1/1:7,3:10:6.02:66,6,0	1/1:6,12:19:0.10:266,0,0	0/0:16,0:12:29.96:0,30,256	0/0:16,0:16:26.71:0,27,230	0/1:5,4:9:37.01:85,0,37	1/1:3,4:7:12.03:132,12,0	1/1:7,6:14:5.85:48,6,0	0/0:12,0:12:29.99:0,30,259	0/0:9,0:9:23.99:0,24,208	0/0:12,0:12:32.99:0,33,286	0/0:12,0:13:32.03:0,32,266	0/0:31,0:30:68.91:0,69,588	0/1:9,13:21:15.93:296,0,16	0/0:19,0:11:19.98:0,20,156	0/0:9,0:9:17.99:0,18,156	0/0:40,0:36:80.88:0,81,694	0/0:4,0:4:8.99:0,9,78	0/1:3,0:5:0:0,0,0	1/1:11,6:27:23.18:194,23,0	0/1:5,1:6:20.04:27,0,20	0/1:3,5:7:8.01:148,0,8	0/0:11,0:11:29.99:0,30,260	1/1:1,4:5:12.03:133,12,0
chr10	38349200	.	ACAAC	A	11907.48	PASS	AB=0.821;AC=34;AF=0.607;AN=56;BaseQRankSum=11.741;DP=533;FS=0.733;HRun=0;HaplotypeScore=139.7878;InbreedingCoeff=0.8595;MQ=47.33;MQ0=4;MQRankSum=-11.766;QD=34.41;ReadPosRankSum=-1.771;VQSLOD=4.3082;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,13:19:49.60:666,50,0	0/0:9,0:9:27.08:0,27,464	0/0:13,0:6:15.03:0,15,263	0/0:9,0:6:17.95:0,18,303	1/1:2,25:22:66.09:980,66,0	0/0:25,0:25:65.69:0,66,1122	0/0:17,0:17:39.13:0,39,698	0/1:8,9:9:5.18:278,0,5	1/1:0,16:14:33.11:555,33,0	0/0:15,0:14:42.13:0,42,730	0/0:26,0:25:65.71:0,66,1146	1/1:7,6:13:39.10:688,39,0	1/1:4,14:18:45.13:664,45,0	1/1:4,15:15:42.14:668,42,0	1/1:7,20:20:60.09:893,60,0	1/1:7,9:15:42.08:679,42,0	1/1:8,5:12:33.07:457,33,0	0/1:23,0:23:20.98:21,0,836	1/1:2,12:10:30.10:539,30,0	1/1:1,24:26:68.43:899,68,0	1/1:2,3:4:12.01:147,12,0	1/1:2,14:14:42.13:634,42,0	1/1:9,17:26:75.23:1304,75,0	1/1:2,11:13:36.12:690,36,0	0/0:21,0:21:57.14:0,57,975	0/0:23,0:23:67.10:0,67,1223	1/1:6,23:27:72.04:1146,72,0	0/0:29,0:29:45.12:0,45,1448
chr10	38349203	.	AC	A	5071.55	PASS	AB=0.985;AC=42;AF=0.750;AN=56;BaseQRankSum=5.179;DP=537;FS=1.638;HRun=1;HaplotypeScore=136.6122;InbreedingCoeff=0.4668;MQ=46.95;MQ0=5;MQRankSum=-2.011;QD=10.68;ReadPosRankSum=5.071;VQSLOD=3.1899;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:18:43.19:275,43,0	1/1:8,0:8:6.20:15,6,0	0/0:14,0:6:14.92:0,15,142	0/0:11,0:6:15.40:0,15,148	1/1:30,0:25:66.36:447,66,0	0/1:23,1:24:41.19:41,0,60	0/1:17,0:17:3.57:4,0,14	0/1:19,1:10:6.33:91,0,6	1/1:16,0:14:32.54:223,33,0	0/0:14,0:13:8.45:0,8,90	0/1:28,0:27:26.97:27,0,36	1/1:15,0:15:43.98:326,44,0	1/1:19,1:18:41.67:301,42,0	1/1:17,2:15:41.66:299,42,0	1/1:26,0:19:51.35:355,51,0	1/1:14,0:13:35.98:250,36,0	1/1:12,1:11:24.64:188,25,0	1/1:21,0:21:17.09:48,17,0	1/1:15,0:10:29.64:208,30,0	1/1:25,2:26:55.81:383,56,0	1/1:4,0:2:5.95:43,6,0	1/1:16,0:14:40.37:271,40,0	1/1:23,3:25:70.53:554,71,0	1/1:15,0:14:37.83:241,38,0	0/1:23,0:23:2.24:2,0,36	0/0:23,0:23:10.55:0,11,83	1/1:29,1:27:63.38:449,63,0	0/1:29,0:29:15.90:30,0,16
chr10	38349204	.	CA	C	4224.62	PASS	AB=1.000;AC=39;AF=0.696;AN=56;BaseQRankSum=-5.183;DP=539;FS=0.545;HRun=10;HaplotypeScore=139.3018;InbreedingCoeff=0.1903;MQ=46.72;MQ0=7;MQRankSum=2.376;QD=8.57;ReadPosRankSum=6.018;VQSLOD=2.4147;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:18:8.04:24,8,0	1/1:0,8:8:24:208,24,0	0/0:12,1:6:11.69:0,12,103	0/0:12,0:6:11.80:0,12,99	0/1:31,0:26:22.80:23,0,23	1/1:4,20:24:37.41:471,37,0	1/1:1,16:17:35.99:313,36,0	0/0:20,0:10:6.94:0,7,73	1/1:16,0:14:7.05:23,7,0	1/1:3,10:12:29.99:260,30,0	1/1:2,25:26:65.97:571,66,0	0/1:15,0:15:4.15:22,0,4	0/1:19,0:17:3.60:21,0,4	1/1:19,0:15:17.70:47,18,0	0/1:26,0:19:14:14,0,25	0/1:14,0:13:10.72:11,0,12	0/1:15,0:12:1.71:2,0,26	1/1:2,19:21:53.21:450,53,0	1/1:14,0:10:6.57:24,7,0	0/1:29,0:28:3.90:14,0,4	1/1:4,0:2:2.49:6,2,0	0/1:17,0:15:0.96:16,0,1	0/1:26,0:25:1.35:80,0,1	0/1:14,0:13:8.39:8,0,14	1/1:2,21:23:47.98:417,48,0	1/1:3,20:23:59.98:521,60,0	0/1:30,0:27:7.09:21,0,7	1/1:3,26:29:77.20:658,77,0
chr10	38349212	.	A	AC	2620.41	PASS	AB=0.706;AC=26;AF=0.464;AN=56;BaseQRankSum=9.669;DP=538;FS=2.233;HRun=0;HaplotypeScore=140.0627;InbreedingCoeff=0.8390;MQ=46.41;MQ0=11;MQRankSum=-10.794;QD=9.81;ReadPosRankSum=0.142;VQSLOD=4.1018;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:8,9:16:15.31:97,0,15	0/0:9,0:9:26.40:0,26,167	0/0:13,0:6:12.04:0,12,155	0/0:12,0:5:13.86:0,14,163	1/1:12,19:26:57.58:356,58,0	0/0:22,0:22:58.63:0,59,373	0/0:17,0:17:35.09:0,35,209	0/1:17,8:16:11.75:153,0,12	1/1:3,11:12:22.47:175,22,0	0/0:14,0:13:32.28:0,32,201	0/0:28,0:27:73.09:0,73,446	0/0:14,0:13:38.74:0,39,296	1/1:6,14:18:19.18:203,19,0	1/1:5,15:16:46.93:308,47,0	1/1:8,17:18:27.02:208,27,0	1/1:4,7:10:14.27:121,14,0	1/1:8,5:11:12.01:118,12,0	0/0:27,0:27:64.69:0,65,415	1/1:6,10:11:29.94:237,30,0	1/1:11,12:22:41.06:269,41,0	1/1:2,3:3:8.94:66,9,0	1/1:6,13:17:32.60:218,33,0	0/0:24,0:23:58.82:0,59,403	0/0:14,0:13:32.27:0,32,228	0/0:27,0:27:61.82:0,62,407	0/0:22,0:22:64.51:0,65,401	1/1:9,19:25:30.44:315,30,0	0/0:28,0:28:79.10:0,79,485
chr10	38349214	.	A	ACAC	6081.86	PASS	AB=0.765;AC=26;AF=0.464;AN=56;BaseQRankSum=6.205;DP=559;FS=2.592;HRun=0;HaplotypeScore=155.7532;InbreedingCoeff=0.8273;MQ=46.66;MQ0=11;MQRankSum=-12.617;QD=21.42;ReadPosRankSum=-2.789;VQSLOD=4.5485;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:16,5:20:28.16:260,0,28	0/0:9,0:9:27.07:0,27,295	0/0:13,0:6:12.04:0,12,185	0/0:12,0:5:12.03:0,12,174	1/1:26,5:26:65.74:706,66,0	0/0:22,0:22:60.13:0,60,612	0/0:18,0:18:36.08:0,36,370	0/1:16,9:16:15.02:460,0,15	1/1:14,0:12:32.84:320,33,0	0/0:15,0:14:42.09:0,42,438	0/0:28,0:27:72.16:0,72,761	0/0:14,0:13:38.78:0,39,476	1/1:15,5:18:38.97:426,39,0	1/1:19,2:17:48.08:544,48,0	1/1:21,5:21:47.58:504,48,0	1/1:9,2:10:26.82:306,27,0	1/1:15,0:12:5.99:284,6,0	0/0:28,0:28:72.15:0,72,800	1/1:15,4:13:39.12:514,39,0	1/1:24,0:23:51.02:584,51,0	1/1:5,0:3:9.03:115,9,0	1/1:19,0:17:41.82:449,42,0	0/0:26,0:25:63:0,63,744	0/0:14,0:13:35.62:0,36,464	0/0:26,0:26:63.15:0,63,707	0/0:22,0:22:63.15:0,63,665	1/1:23,4:27:56.35:609,56,0	0/0:28,0:28:81.19:0,81,862
chr10	38349225	.	C	CA	1613.23	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=1.872;DP=556;FS=5.633;HRun=5;HaplotypeScore=136.6306;InbreedingCoeff=0.9046;MQ=48.38;MQ0=12;MQRankSum=-4.232;QD=29.87;ReadPosRankSum=0.069;VQSLOD=1.7527;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:17:27.06:0,27,290	0/0:10,0:10:30.08:0,30,322	0/0:10,0:5:4.25:0,4,60	0/0:12,0:5:6.01:0,6,63	0/0:33,0:28:57.13:0,57,612	0/0:20,0:20:57.14:0,57,613	0/0:15,0:15:42.07:0,42,434	0/0:28,0:15:33.08:0,33,354	0/0:12,0:10:24.02:0,24,245	0/0:21,0:20:54.11:0,54,562	0/0:27,0:26:66.17:0,66,709	1/1:1,14:14:42.09:533,42,0	0/0:24,0:22:39.09:0,39,418	0/0:21,0:17:42.10:0,42,450	0/0:27,0:20:39.10:0,39,419	0/0:11,0:11:21.05:0,21,226	0/0:18,0:15:39.08:0,39,410	0/0:27,0:28:71.21:0,71,748	0/0:19,0:11:30.07:0,30,322	0/0:23,0:22:48.12:0,48,516	0/0:8,0:6:12.03:0,12,129	0/0:18,0:16:36.09:0,36,387	1/1:0,26:25:66.21:868,66,0	1/1:0,13:12:27.09:355,27,0	0/0:24,0:24:63.16:0,63,677	0/0:23,0:23:66.16:0,66,709	0/0:25,0:23:39.10:0,39,419	0/0:27,0:27:81.20:0,81,871
chr10	38349653	.	TG	T	12010.37	PASS	AB=0.515;AC=33;AF=0.589;AN=56;BaseQRankSum=13.420;DP=634;FS=14.290;HRun=2;HaplotypeScore=67.4437;InbreedingCoeff=0.9482;MQ=52.63;MQ0=16;MQRankSum=-0.335;QD=29.66;ReadPosRankSum=1.852;VQSLOD=3.2315;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,22:22:63.20:814,63,0	0/0:17,0:17:51.15:0,51,741	0/0:14,0:8:24.08:0,24,338	0/0:19,0:7:15.01:0,15,200	1/1:0,36:34:84.27:1085,84,0	0/0:25,0:25:75.24:0,75,1102	0/0:18,0:17:51.15:0,51,733	1/1:8,24:24:66.21:855,66,0	1/1:0,16:14:36.12:461,36,0	0/0:26,0:26:72.24:0,72,1079	0/0:19,0:18:54.18:0,54,809	1/1:1,18:19:45.15:584,45,0	1/1:1,21:22:54.18:701,54,0	1/1:1,17:18:48.15:619,48,0	1/1:0,20:20:39.13:502,39,0	1/1:0,27:27:69.22:890,69,0	1/1:1,25:25:54.18:701,54,0	0/0:24,0:24:72.19:0,72,1051	1/1:2,15:16:42.14:545,42,0	1/1:1,35:34:78.25:1007,78,0	1/1:1,7:8:21.07:273,21,0	1/1:1,26:27:63.20:810,63,0	1/1:2,30:30:63.20:811,63,0	0/1:1,16:17:2.81:460,0,3	0/0:19,0:19:57.19:0,57,855	0/0:33,0:33:99:0,99,1484	1/1:2,28:28:69.22:892,69,0	0/0:15,0:15:45.15:0,45,674
chr10	38349776	.	C	CCAATTCGA	19488.56	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=3.628;DP=489;FS=2.244;HRun=0;HaplotypeScore=103.5414;InbreedingCoeff=0.9465;MQ=45.76;MQ0=1;MQRankSum=-14.790;QD=71.65;ReadPosRankSum=-2.000;VQSLOD=4.3676;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,6:8:21.07:764,21,0	0/0:11,0:11:33.11:0,33,947	0/0:11,0:7:18.06:0,18,399	0/0:16,0:7:15.05:0,15,367	1/1:8,18:24:39.11:1259,39,0	0/0:24,0:24:72.25:0,72,1985	0/0:15,0:15:42.14:0,42,1174	1/1:17,6:15:33.11:1248,33,0	1/1:5,5:9:18.06:707,18,0	0/0:31,0:31:90.31:0,90,2571	0/0:19,0:19:54.19:0,54,1503	1/1:5,7:12:27.09:945,27,0	1/1:5,11:18:33.11:1324,33,0	1/1:1,10:12:30.10:1317,30,0	1/1:4,16:20:42.14:1584,42,0	1/1:7,7:17:36.12:1403,36,0	1/1:2,4:6:9.03:208,9,0	0/0:31,0:31:81.26:0,81,2184	1/1:7,5:10:27.09:1121,27,0	1/1:14,16:26:60.19:2103,60,0	1/1:3,0:3:3.01:70,3,0	1/1:9,9:17:33.11:1239,33,0	1/1:9,16:25:54.18:2166,54,0	1/1:2,4:5:6.02:267,6,0	0/0:27,0:27:78.27:0,78,2209	0/0:22,0:22:66.22:0,66,1765	1/1:8,15:21:48.15:1765,48,0	0/0:10,0:10:30.05:0,30,733
chr10	38350962	.	GA	G	4832.63	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=13.349;DP=643;FS=6.568;HRun=6;HaplotypeScore=61.4354;InbreedingCoeff=0.9999;MQ=85.70;MQ0=0;MQRankSum=-1.456;QD=27.46;ReadPosRankSum=3.682;VQSLOD=5.4300;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,102,1322	0/0:15,0:15:42.14:0,42,553	0/0:26,0:26:45.56:0,46,774	0/0:19,0:19:41.80:0,42,511	1/1:3,28:31:84.21:903,84,0	0/0:19,0:19:57.18:0,57,731	0/0:32,0:32:87.27:0,87,1129	0/0:25,0:26:69.22:0,69,896	1/1:2,12:14:36.09:387,36,0	0/0:40,0:40:99:0,117,1506	0/0:15,0:15:45.13:0,45,577	0/0:16,0:17:42.14:0,42,552	1/1:0,12:12:36.09:387,36,0	1/1:0,25:25:60.15:645,60,0	1/1:2,17:19:45.11:484,45,0	1/1:0,22:22:60.15:645,60,0	1/1:2,25:27:69.17:741,69,0	0/0:21,0:21:57.19:0,57,749	0/0:22,0:22:60.19:0,60,778	0/0:29,0:29:78.25:0,78,1025	0/0:27,0:27:78.23:0,78,996	1/1:1,25:26:60.14:641,60,0	0/0:21,0:21:57.17:0,57,734	0/0:22,0:22:63.20:0,63,828	0/0:23,0:23:63.20:0,63,827	0/0:25,0:25:72.21:0,72,916	0/0:22,0:22:60.19:0,60,774	0/0:11,0:11:33.11:0,33,434
chr10	38351758	.	T	TGGGATCACTTCC	3233.06	PASS	AB=0.795;AC=5;AF=0.089;AN=56;BaseQRankSum=-3.015;DP=476;FS=60.515;HRun=0;HaplotypeScore=201.9767;InbreedingCoeff=-0.0997;MQ=62.60;MQ0=14;MQRankSum=-5.036;QD=42.54;ReadPosRankSum=4.067;VQSLOD=1.0949;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:16:47.14:0,47,1373	0/0:7,0:7:21.05:0,21,317	0/0:42,0:13:37.97:0,38,759	0/0:25,0:13:28.65:0,29,459	0/0:17,0:16:47.07:0,47,876	0/0:19,0:18:46.28:0,46,1106	0/0:18,0:18:41.46:0,41,770	0/1:21,0:23:99:1358,0,187	0/0:17,0:17:48.12:0,48,1120	0/0:23,0:22:62.19:0,62,1475	0/0:18,0:17:50.65:0,51,874	0/0:17,0:17:29.76:0,30,859	0/0:6,0:6:18.05:0,18,489	0/0:13,0:12:28.63:0,29,830	0/0:22,0:22:61.95:0,62,1769	0/0:11,0:10:15.05:0,15,540	0/0:19,0:19:33.05:0,33,945	0/0:12,0:12:36.10:0,36,979	0/1:14,1:13:75.33:389,0,75	0/1:10,1:14:99:640,0,127	0/1:6,3:9:88.68:308,0,89	0/0:12,0:12:36.10:0,36,956	0/0:14,0:14:29.95:0,30,687	0/0:10,0:10:18.01:0,18,597	0/0:14,0:14:36.08:0,36,830	0/0:25,0:23:62.74:0,63,1371	0/1:7,4:12:99:658,0,140	0/0:22,0:21:51.09:0,51,650
chr10	38351867	.	T	TC	6853.59	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-5.052;DP=473;FS=8.816;HRun=7;HaplotypeScore=62.1471;InbreedingCoeff=0.9513;MQ=78.06;MQ0=1;MQRankSum=-0.300;QD=23.15;ReadPosRankSum=3.565;VQSLOD=4.8751;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:9,19:28:60.17:712,60,0	0/0:4,0:4:8.97:0,9,77	0/0:27,0:26:58.54:0,59,526	0/0:27,0:28:41.24:0,41,364	1/1:3,11:14:27.08:326,27,0	0/0:10,0:10:24.03:0,24,231	0/0:25,0:25:51.05:0,51,486	1/1:8,11:18:33.08:378,33,0	1/1:2,19:21:45.14:541,45,0	0/0:16,0:16:33.05:0,33,319	0/0:9,0:9:21.01:0,21,196	1/1:5,21:26:4.12:333,4,0	1/1:0,9:9:24.06:278,24,0	1/1:4,14:17:24.07:290,24,0	1/1:1,13:14:30.09:362,30,0	1/1:1,10:11:27.08:326,27,0	1/1:1,25:26:54.17:652,54,0	0/0:15,0:15:45.06:0,45,430	1/1:3,10:13:27.07:309,27,0	1/1:1,4:5:6.02:72,6,0	1/1:5,27:32:63.19:760,63,0	1/1:3,7:10:27.08:316,27,0	1/1:3,9:12:14.98:181,15,0	1/1:2,21:23:45.14:544,45,0	0/0:12,0:12:30.04:0,30,289	0/0:14,0:14:39.06:0,39,375	1/1:0,15:15:39.11:471,39,0	0/0:16,0:16:30.03:0,30,289
chr10	38353225	.	GT	G	13048.51	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=9.128;DP=665;FS=0.352;HRun=8;HaplotypeScore=69.4213;InbreedingCoeff=0.9998;MQ=85.92;MQ0=0;MQRankSum=-4.809;QD=25.89;ReadPosRankSum=5.825;VQSLOD=4.9579;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,37:40:99:1043,108,0	1/1:1,12:13:36.06:348,36,0	0/0:33,0:33:65.64:0,66,779	0/0:14,0:13:29.26:0,29,312	1/1:2,24:26:69.05:656,69,0	1/1:0,24:24:72.12:695,72,0	1/1:1,25:26:75.12:724,75,0	0/0:28,0:28:75.20:0,75,876	1/1:2,16:18:44.99:434,45,0	1/1:2,29:31:87.07:823,87,0	1/1:1,23:24:66.06:628,66,0	1/1:2,19:21:54.09:521,54,0	1/1:0,16:16:42.07:405,42,0	1/1:1,31:32:87.14:840,87,0	1/1:1,25:26:72.12:695,72,0	1/1:2,19:21:48.08:463,48,0	1/1:3,25:28:63.10:608,63,0	1/1:1,19:20:54.09:521,54,0	0/0:29,0:29:69.17:0,69,792	0/0:14,0:14:42.13:0,42,507	0/0:19,0:19:57.17:0,57,689	1/1:0,20:20:60.10:579,60,0	1/1:0,16:16:45.07:434,45,0	1/1:0,26:26:75.12:724,75,0	1/1:1,24:25:66.10:637,66,0	1/1:1,28:29:84.12:806,84,0	0/0:23,0:23:66.18:0,66,776	1/1:1,21:22:48.08:463,48,0
chr10	38355305	.	T	TC	2906.54	PASS	AB=1.000;AC=37;AF=0.661;AN=56;BaseQRankSum=-0.159;DP=472;FS=4.735;HRun=10;HaplotypeScore=69.6224;InbreedingCoeff=0.7586;MQ=79.86;MQ0=0;MQRankSum=-0.860;QD=9.38;ReadPosRankSum=-0.499;VQSLOD=2.4232;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,13:32:27.41:427,27,0	1/1:5,0:5:14.70:102,15,0	0/1:14,0:14:17.19:17,0,61	0/0:15,0:15:3.43:0,3,92	1/1:2,15:17:20.97:198,21,0	1/1:5,1:15:5.61:46,6,0	1/1:11,0:18:5.68:28,6,0	0/0:16,0:17:16.98:0,17,129	1/1:5,14:19:33.08:352,33,0	1/1:6,1:18:17.77:134,18,0	1/1:3,5:8:3.89:34,4,0	0/0:19,0:20:43.98:0,44,350	1/1:9,7:16:5.43:263,5,0	1/1:7,12:19:14.52:359,15,0	1/1:5,10:15:21.05:224,21,0	1/1:6,14:20:22.14:227,22,0	1/1:8,1:24:11.36:57,11,0	1/1:2,1:15:20.87:119,21,0	0/0:12,0:13:19.99:0,20,153	0/0:8,0:8:11.97:0,12,98	0/0:32,0:34:66.97:0,67,529	1/1:11,8:19:2.42:230,2,0	0/0:14,0:14:17.93:0,18,143	0/0:23,0:23:56.92:0,57,468	1/1:18,0:18:20.90:163,21,0	1/1:6,1:14:17.32:101,17,0	0/0:17,0:17:35.92:0,36,295	1/1:1,0:4:5.68:28,6,0
chr10	38357515	.	G	GGTGT	2480.83	PASS	AB=1.000;AC=31;AF=0.738;AN=42;BaseQRankSum=-3.178;DP=429;FS=1.349;HRun=0;HaplotypeScore=100.2267;InbreedingCoeff=0.5909;MQ=68.98;MQ0=11;MQRankSum=1.775;QD=10.69;ReadPosRankSum=-2.294;VQSLOD=2.3893;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:23:3:0,3,28	1/1:6,0:6:6.02:103,6,0	./.	./.	1/1:14,0:14:15.02:224,15,0	1/1:20,0:19:6.02:109,6,0	1/1:15,0:14:6.49:95,6,0	./.	1/1:12,0:12:11.95:170,12,0	1/1:13,0:12:12.51:185,13,0	./.	0/0:2,0:5:4.82:0,5,33	1/1:3,3:8:0.47:1,0,0	0/1:5,0:4:0:0,0,0	1/1:7,3:12:3.01:65,3,0	1/1:16,0:16:12.93:216,13,0	1/1:22,3:25:40.64:655,41,0	1/1:14,0:13:9.02:118,9,0	0/0:17,0:18:6.01:0,6,56	./.	0/1:28,0:27:0:0,0,0	1/1:8,0:7:6.02:109,6,0	0/1:6,0:7:0:0,0,0	./.	./.	1/1:16,0:15:18.99:276,19,0	0/0:10,0:14:15.01:0,15,136	1/1:13,0:11:21.03:278,21,0
chr10	38358217	.	C	CACACACACACACACACAA	3749.94	PASS	AB=0.955;AC=25;AF=0.446;AN=56;BaseQRankSum=-1.562;DP=638;FS=4.167;HRun=0;HaplotypeScore=255.4754;InbreedingCoeff=0.2807;MQ=48.79;MQ0=33;MQRankSum=-1.640;QD=10.27;ReadPosRankSum=4.493;VQSLOD=2.0103;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:21:3.12:3,0,143	1/1:12,0:12:26.89:258,27,0	0/0:36,0:9:2.67:0,3,48	0/0:47,0:18:9.46:0,9,90	0/1:15,0:15:12:12,0,161	1/1:16,0:17:20.88:342,21,0	1/1:32,0:31:46.65:434,47,0	0/0:27,0:28:1.23:0,1,333	0/0:21,0:21:23.60:0,24,249	1/1:28,0:21:45.07:597,45,0	1/1:16,0:15:16.98:275,17,0	0/0:24,0:22:34.51:0,35,226	0/0:14,0:14:7.74:0,8,97	0/0:20,0:17:16.12:0,16,156	0/0:19,0:16:26.13:0,26,187	0/0:35,0:33:64.88:0,65,439	0/1:21,0:20:99:420,0,103	0/1:5,6:15:63.43:250,0,63	0/0:11,0:12:7.09:0,7,81	0/1:13,0:12:10.37:10,0,83	0/1:38,0:35:14.64:15,0,310	0/1:16,0:16:4.64:5,0,80	0/0:17,0:13:13.91:0,14,67	0/1:29,0:28:8.84:133,0,9	1/1:5,0:15:5.98:126,6,0	1/1:24,0:21:20.53:432,21,0	0/1:33,0:33:99:184,0,194	1/1:3,6:16:3.01:255,3,0
chr10	38360138	.	CA	C	12303.10	PASS	AB=1.000;AC=35;AF=0.625;AN=56;BaseQRankSum=-1.767;DP=634;FS=3.456;HRun=2;HaplotypeScore=82.7768;InbreedingCoeff=0.9413;MQ=75.59;MQ0=0;MQRankSum=-0.494;QD=33.89;ReadPosRankSum=-0.739;VQSLOD=4.7086;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,27:27:72.23:935,72,0	0/0:13,0:13:39.13:0,39,584	0/0:21,0:21:48.09:0,48,629	0/1:12,0:12:4.54:5,0,178	0/0:21,0:21:60.19:0,60,879	1/1:0,17:17:45.15:584,45,0	1/1:1,26:27:72.23:935,72,0	1/1:2,13:15:39.11:492,39,0	0/0:17,0:17:51.16:0,51,744	1/1:0,15:15:42.11:517,42,0	1/1:0,9:9:24.08:312,24,0	1/1:1,20:21:54.18:701,54,0	0/0:28,0:28:84.28:0,84,1258	0/0:32,0:32:93.29:0,93,1346	0/0:40,0:40:99:0,114,1649	0/0:29,0:29:87.28:0,87,1283	0/0:48,0:48:99:0,144,2155	1/1:0,27:27:78.25:1012,78,0	1/1:0,17:17:51.13:640,51,0	1/1:0,8:8:18.05:222,18,0	1/1:1,53:54:99:1791,138,0	0/0:22,0:22:60.20:0,60,898	1/1:0,23:23:63.20:818,63,0	1/1:0,37:37:99:1362,105,0	1/1:0,16:16:45.14:577,45,0	1/1:0,17:17:51.17:661,51,0	1/1:0,14:14:39.13:506,39,0	1/1:0,7:7:18.06:234,18,0
chr10	38360503	.	GA	G	3033.69	PASS	AB=0.790;AC=32;AF=0.571;AN=56;BaseQRankSum=6.861;DP=614;FS=6.790;HRun=14;HaplotypeScore=70.0123;InbreedingCoeff=0.3640;MQ=77.65;MQ0=1;MQRankSum=-1.373;QD=7.17;ReadPosRankSum=3.216;VQSLOD=2.6336;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,24:30:50.52:348,51,0	0/1:7,3:10:40.81:41,0,76	0/0:35,0:22:6.84:0,7,118	0/1:20,1:18:27.75:28,0,39	0/0:29,3:32:24.06:0,24,474	1/1:4,15:21:36.76:238,37,0	1/1:5,17:26:34.86:328,35,0	1/1:7,18:27:24.10:264,24,0	0/0:18,0:19:26.20:0,26,277	1/1:9,13:27:23.90:267,24,0	0/1:7,10:19:2.19:109,0,2	0/0:19,1:22:18.28:0,18,292	0/0:16,0:16:23.97:0,24,210	0/1:16,4:20:25.78:26,0,195	0/0:26,2:29:9.35:0,9,338	0/1:15,4:19:31.38:31,0,288	0/1:15,6:21:46.09:46,0,307	1/1:9,17:28:48.62:320,49,0	0/1:9,3:16:27.87:82,0,28	1/1:3,8:13:27.85:176,28,0	1/1:4,11:17:27.86:176,28,0	0/0:16,1:17:21.21:0,21,325	0/1:14,3:17:16.85:17,0,268	0/0:15,3:20:3.55:0,4,290	1/1:6,11:20:1.11:130,1,0	1/1:9,19:29:36.51:346,37,0	1/1:15,5:25:20.84:120,21,0	1/1:3,12:17:21.86:135,22,0
chr10	38361762	.	TCTGTCTGC	T	8204.24	PASS	AB=0.983;AC=50;AF=0.893;AN=56;BaseQRankSum=0.970;DP=522;FS=1.958;HRun=0;HaplotypeScore=205.5119;InbreedingCoeff=0.4827;MQ=68.24;MQ0=0;MQRankSum=-3.462;QD=18.03;ReadPosRankSum=6.608;VQSLOD=3.6768;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:28,1:29:51.79:109,0,52	1/1:6,0:6:11.97:209,12,0	0/0:31,0:26:50.91:0,51,699	0/0:36,0:35:55.58:0,56,1472	1/1:18,0:18:2.97:47,3,0	0/1:17,0:17:39.49:76,0,39	1/1:25,3:28:29.29:399,29,0	1/1:25,0:25:54.05:689,54,0	1/1:19,0:19:17.92:299,18,0	1/1:17,0:17:33.03:585,33,0	1/1:10,0:10:11.99:194,12,0	1/1:30,0:30:56.60:799,57,0	1/1:16,0:16:14.90:268,15,0	1/1:18,0:18:20.94:241,21,0	1/1:34,0:34:35.59:355,36,0	1/1:21,0:21:41.83:589,42,0	1/1:15,0:15:17.49:252,17,0	1/1:5,0:5:9.02:181,9,0	1/1:12,0:12:20.99:348,21,0	1/1:10,0:10:15.04:269,15,0	1/1:15,0:15:11.93:143,12,0	1/1:14,0:14:5.84:34,6,0	1/1:9,0:9:5.94:42,6,0	1/1:21,0:21:14.86:237,15,0	1/1:17,0:17:23.67:301,24,0	1/1:19,0:19:38.67:834,39,0	1/1:22,0:22:15.12:525,15,0	1/1:8,0:8:11.97:182,12,0
chr10	38361771	.	CTG	C	918.77	PASS	AB=0.806;AC=19;AF=0.339;AN=56;BaseQRankSum=6.833;DP=531;FS=65.133;HRun=0;HaplotypeScore=200.4626;InbreedingCoeff=-0.5355;MQ=54.41;MQ0=3;MQRankSum=-0.710;QD=2.90;ReadPosRankSum=7.933;VQSLOD=0.3148;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:68.70:0,69,1171	0/1:3,2:5:23.44:30,0,23	0/0:36,0:27:77.63:0,78,1447	0/0:35,0:31:84.71:0,85,1500	0/1:9,9:18:15.08:15,0,36	0/0:15,0:15:20.95:0,21,611	0/0:25,0:25:47.38:0,47,938	0/1:24,3:27:23.35:23,0,431	0/1:8,8:16:71.52:72,0,96	0/1:12,4:16:99:115,0,167	0/1:10,1:11:56.86:57,0,85	0/1:19,15:34:55.67:56,0,352	0/1:7,8:15:38.60:39,0,160	0/0:13,6:19:1.44:0,1,191	0/0:25,9:34:6.33:0,6,332	0/1:16,8:24:99:105,0,271	0/1:15,2:17:12.42:12,0,219	0/1:4,0:4:44.04:46,0,44	0/1:9,2:11:92.29:92,0,112	0/1:7,5:12:59.21:59,0,73	0/1:15,0:15:21.99:22,0,100	0/0:6,6:12:15:0,15,149	0/0:7,2:9:14.99:0,15,151	0/1:18,2:20:46.50:46,0,115	0/1:14,5:19:40.88:41,0,221	0/1:18,6:23:99:124,0,352	0/1:19,4:23:99:107,0,258	0/1:4,2:6:14.36:14,0,96
chr10	38361775	.	CTGCCTG	C	3166	PASS	AB=0.821;AC=23;AF=0.411;AN=56;BaseQRankSum=3.960;DP=549;FS=32.796;HRun=0;HaplotypeScore=223.8672;InbreedingCoeff=-0.6072;MQ=50.16;MQ0=5;MQRankSum=1.083;QD=7.76;ReadPosRankSum=8.348;VQSLOD=1.0689;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:62.97:0,63,825	1/1:2,2:4:1.46:104,1,0	0/0:39,0:28:83.09:0,83,1847	0/0:35,0:31:83.44:0,83,2293	0/1:13,9:21:16.19:16,0,34	0/0:14,0:14:1.04:0,1,460	0/1:27,0:27:9.84:10,0,539	0/1:25,3:28:35.11:251,0,35	0/1:7,8:15:28.32:146,0,28	0/1:12,4:16:31.17:317,0,31	0/1:11,1:12:10.86:98,0,11	0/1:19,15:34:85.28:328,0,85	0/1:8,8:16:88.67:121,0,89	0/1:14,6:20:42.78:77,0,43	0/1:24,9:33:73.32:88,0,73	0/1:15,8:23:25.21:252,0,25	0/1:19,2:21:79.59:82,0,80	0/1:5,0:5:18.45:95,0,18	0/1:10,2:12:26.77:173,0,27	0/1:8,5:13:22.14:132,0,22	0/1:16,0:16:35.93:51,0,36	0/0:7,6:13:14.25:0,14,88	0/0:8,2:10:6.79:0,7,64	0/1:18,2:20:43.52:120,0,44	0/1:14,5:19:64.80:122,0,65	0/1:18,6:23:78.37:425,0,78	0/1:18,4:22:76.75:246,0,77	0/1:4,2:6:34.52:67,0,35
chr10	38361807	.	C	CTG	474.44	PASS	AB=1.000;AC=34;AF=0.630;AN=54;BaseQRankSum=4.810;DP=642;FS=18.935;HRun=0;HaplotypeScore=246.6397;InbreedingCoeff=0.1436;MQ=39.77;MQ0=5;MQRankSum=-4.577;QD=0.95;ReadPosRankSum=-0.517;VQSLOD=0.8425;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:32:25.78:0,26,336	1/1:6,0:6:1.34:2,1,0	0/0:29,0:20:54.03:0,54,741	0/0:33,0:21:27.08:0,27,631	1/1:31,0:30:5.79:55,6,0	0/1:20,0:19:15.79:16,0,342	0/1:31,0:31:12:12,0,117	0/1:25,0:22:2.56:3,0,57	1/1:18,0:18:5.04:30,5,0	0/1:25,0:25:9.03:17,0,9	0/1:16,0:14:0.04:0,0,0	1/1:33,4:36:0.08:132,0,0	1/1:20,0:20:4.87:36,5,0	1/1:19,0:19:2.18:11,2,0	0/1:38,0:38:0.26:1,0,0	1/1:30,0:30:5.47:45,5,0	0/1:25,0:24:6.93:56,0,7	0/0:7,0:7:1.49:0,1,16	0/1:18,0:18:27.60:28,0,51	1/1:18,0:17:2.64:16,3,0	0/0:25,0:25:2.23:0,2,22	0/1:19,0:19:0:0,0,0	./.	1/1:23,7:30:5.38:53,5,0	1/1:23,0:20:2.99:24,3,0	0/1:29,0:28:6.16:39,0,6	1/1:17,0:17:7.50:33,7,0	1/1:5,0:5:2.96:10,3,0
chr10	38363363	.	T	TA	2540.96	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-11.572;DP=633;FS=2.801;HRun=5;HaplotypeScore=59.4159;InbreedingCoeff=0.9989;MQ=71.15;MQ0=2;MQRankSum=0.680;QD=32.58;ReadPosRankSum=-0.872;VQSLOD=3.9217;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,27:30:75.24:987,75,0	0/0:12,0:12:33.07:0,33,346	0/0:27,0:22:40.53:0,41,406	0/0:18,0:10:24.01:0,24,251	0/0:24,0:24:63.16:0,63,677	1/1:1,21:22:60.20:789,60,0	1/1:1,25:26:69.22:908,69,0	0/0:24,0:24:69.17:0,69,741	0/0:22,0:22:54.13:0,54,580	0/0:29,0:29:84.21:0,84,903	0/0:25,0:25:69.15:0,69,730	0/0:27,0:27:78.20:0,78,838	0/0:19,0:19:57.12:0,57,603	0/0:15,0:15:39.10:0,39,419	0/0:22,0:22:63.14:0,63,669	0/0:24,0:24:69.17:0,69,742	0/0:32,0:32:90.21:0,90,959	0/0:29,0:29:71.64:0,72,837	0/0:13,0:13:39.10:0,39,419	0/0:26,0:26:72.18:0,72,774	0/0:23,0:23:60.14:0,60,644	0/0:13,0:13:30.07:0,30,322	0/0:19,0:19:51.13:0,51,548	0/0:18,0:17:48.12:0,48,515	0/0:29,0:29:84.21:0,84,902	0/0:27,0:27:75.18:0,75,802	0/0:25,0:25:72.18:0,72,773	0/0:13,0:13:39.10:0,39,419
chr10	38364307	.	T	TTGTG	25644.41	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=9.524;DP=671;FS=3.125;HRun=0;HaplotypeScore=263.9482;InbreedingCoeff=0.9913;MQ=45.31;MQ0=1;MQRankSum=-9.702;QD=46.46;ReadPosRankSum=-0.661;VQSLOD=4.8650;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:72.25:0,72,1226	1/1:4,4:9:20.75:371,21,0	0/0:28,0:23:21.39:0,21,580	0/0:19,0:20:13.70:0,14,455	1/1:10,13:24:41.84:865,42,0	0/0:21,0:21:56.21:0,56,908	0/0:21,0:21:32.08:0,32,768	1/1:11,24:35:78.15:1646,78,0	1/1:9,8:17:30.10:723,30,0	1/1:14,17:31:78.11:1523,78,0	1/1:8,9:17:33.11:794,33,0	1/1:11,19:30:84.24:1750,84,0	1/1:6,15:21:57.20:1312,57,0	1/1:9,16:25:69.18:1466,69,0	1/1:9,19:29:63.15:1387,63,0	1/1:13,13:26:57.13:1173,57,0	1/1:13,13:26:63.17:1281,63,0	1/1:10,8:18:27.25:647,27,0	1/1:11,5:16:32.92:545,33,0	1/1:5,17:22:60.17:1323,60,0	1/1:16,7:24:45.01:672,45,0	1/1:10,17:28:69.19:1396,69,0	1/1:14,18:32:60.09:1153,60,0	1/1:14,13:27:27.07:634,27,0	1/1:5,17:23:53.90:1118,54,0	1/1:11,20:33:80.76:1694,81,0	1/1:7,19:27:80.98:1752,81,0	1/1:6,5:11:21.01:419,21,0
chr10	38364346	.	CGT	C	12277.74	PASS	AB=0.864;AC=49;AF=0.875;AN=56;BaseQRankSum=-0.129;DP=689;FS=24.514;HRun=0;HaplotypeScore=240.2062;InbreedingCoeff=0.4859;MQ=52.11;MQ0=8;MQRankSum=-1.830;QD=20.16;ReadPosRankSum=5.170;VQSLOD=3.2471;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:29:16.88:169,0,17	1/1:0,10:10:12.04:168,12,0	0/0:36,0:31:81.09:0,81,1194	0/0:44,0:35:86.97:0,87,1041	1/1:4,15:19:15.05:228,15,0	0/1:23,0:23:28.65:166,0,29	1/1:22,1:23:8.64:197,9,0	1/1:13,8:21:42.05:568,42,0	1/1:2,18:20:14.92:229,15,0	1/1:3,24:26:69.21:974,69,0	1/1:0,10:10:12.04:183,12,0	1/1:1,31:32:60.11:902,60,0	1/1:0,20:20:33.11:486,33,0	1/1:4,20:24:27.09:412,27,0	1/1:3,27:29:33.08:501,33,0	1/1:0,28:28:36.12:544,36,0	1/1:1,27:28:51.17:757,51,0	0/1:5,11:16:10.17:356,0,10	1/1:4,13:16:39.11:539,39,0	1/1:2,20:21:24.08:355,24,0	1/1:1,34:35:48.15:732,48,0	1/1:4,23:27:33.09:491,33,0	1/1:0,26:26:21.05:319,21,0	1/1:5,24:28:24.03:365,24,0	1/1:0,23:23:30.10:455,30,0	1/1:3,27:30:81.26:1182,81,0	1/1:1,27:28:51.17:773,51,0	1/1:0,12:11:15.05:228,15,0
chr10	38364805	.	A	ACC	7291.71	PASS	AB=0.773;AC=48;AF=0.857;AN=56;BaseQRankSum=3.424;DP=591;FS=3.001;HRun=0;HaplotypeScore=113.5305;InbreedingCoeff=0.6283;MQ=69.01;MQ0=17;MQRankSum=-3.994;QD=14.64;ReadPosRankSum=2.041;VQSLOD=5.0063;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:32,0:32:68.67:520,69,0	0/0:1,0:1:0:0,0,0	0/0:55,0:32:89.26:0,89,952	0/0:37,0:24:65.25:0,65,724	1/1:18,0:18:44.66:322,45,0	1/1:19,0:18:26.35:272,26,0	1/1:16,0:16:29.53:263,30,0	1/1:18,0:18:53.90:471,54,0	0/1:14,0:14:1.96:185,0,2	1/1:20,0:20:35.20:349,35,0	1/1:17,0:19:23.96:200,24,0	1/1:20,0:20:41.93:356,42,0	1/1:16,0:16:25.27:252,25,0	1/1:23,0:23:52.91:373,53,0	1/1:26,0:26:55.67:451,56,0	1/1:24,0:24:42.87:398,43,0	1/1:29,0:29:79.83:532,80,0	1/1:10,0:12:12.09:187,12,0	1/1:18,0:17:41.62:378,42,0	1/1:2,9:12:14.75:131,15,0	1/1:4,28:35:3.01:31,3,0	1/1:13,0:13:27.90:189,28,0	1/1:17,0:17:24.81:251,25,0	0/1:4,19:23:4.86:57,0,5	1/1:19,0:19:29.61:249,30,0	1/1:20,0:20:42.39:396,42,0	1/1:4,20:24:9.16:257,9,0	1/1:10,0:10:20.86:222,21,0
chr10	38369607	.	T	TAAAAA	11512.67	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=3.369;DP=530;FS=3.355;HRun=10;HaplotypeScore=111.4771;InbreedingCoeff=0.9748;MQ=67.91;MQ0=0;MQRankSum=-9.950;QD=35.21;ReadPosRankSum=-5.007;VQSLOD=2.4255;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:6,0:22:35.67:332,36,0	0/0:5,0:5:11.99:0,12,193	0/0:14,0:14:16.65:0,17,262	0/0:9,0:9:11.92:0,12,156	0/0:25,0:25:62.88:0,63,902	1/1:5,0:26:47.46:480,47,0	1/1:2,0:13:33.08:364,33,0	1/1:15,8:24:36.12:900,36,0	0/0:19,0:19:48.08:0,48,770	1/1:12,9:24:51.17:1116,51,0	1/1:5,6:11:24.04:486,24,0	1/1:4,0:17:36.09:383,36,0	0/0:21,0:21:57.11:0,57,890	0/0:15,0:15:32.95:0,33,507	0/0:26,0:26:66.09:0,66,1009	0/0:13,0:14:36.07:0,36,559	0/0:33,0:33:81.15:0,81,1301	1/1:6,8:16:30.06:629,30,0	1/1:10,9:22:51.17:1092,51,0	1/1:7,8:19:39.09:801,39,0	1/1:5,5:10:6.49:143,6,0	0/0:22,0:22:60.16:0,60,931	1/1:7,0:21:33.06:356,33,0	1/1:4,0:18:29.08:252,29,0	1/1:6,8:18:36.12:865,36,0	1/1:8,11:22:59.01:1357,59,0	1/1:16,9:33:50.78:1300,51,0	1/1:2,7:10:24.08:657,24,0
chr10	38371003	.	A	AT	1274.50	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-8.870;DP=659;FS=0.000;HRun=9;HaplotypeScore=63.4144;InbreedingCoeff=0.9542;MQ=72.10;MQ0=0;MQRankSum=-1.785;QD=19.61;ReadPosRankSum=1.225;VQSLOD=4.0361;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,17:18:16.06:405,16,0	0/0:11,0:11:26.97:0,27,229	0/0:14,0:13:13.11:0,13,162	0/0:11,0:11:28.44:0,28,211	0/0:33,2:35:32.56:0,33,727	1/1:6,22:28:63.17:697,63,0	1/1:5,14:19:7.03:306,7,0	0/0:21,0:21:44.98:0,45,391	0/0:23,0:23:62.97:0,63,546	0/0:42,0:42:99:0,105,908	0/0:29,0:29:77.98:0,78,677	0/0:23,0:23:33.80:0,34,485	0/0:22,0:22:53.97:0,54,465	0/0:21,0:21:56.97:0,57,494	0/0:20,0:20:53.99:0,54,469	0/0:18,0:18:44.97:0,45,391	0/0:20,0:20:50.98:0,51,443	0/0:20,0:19:53.99:0,54,469	0/0:23,0:23:59.97:0,60,515	0/0:31,0:31:83.94:0,84,722	0/0:24,0:24:56.94:0,57,490	0/0:24,0:24:65.97:0,66,569	0/0:37,0:37:98.92:0,99,849	0/0:18,0:18:47.96:0,48,413	0/0:35,0:34:95.92:0,96,824	0/0:22,0:22:53.98:0,54,469	0/0:32,0:32:83.97:0,84,729	0/0:18,0:18:44.99:0,45,391
chr10	38372088	.	GCCCCAC	G	8570.67	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-1.993;DP=295;FS=0.000;HRun=0;HaplotypeScore=83.1112;InbreedingCoeff=0.5413;MQ=68.58;MQ0=0;MQRankSum=-5.142;QD=31.05;ReadPosRankSum=3.500;VQSLOD=4.5011;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,12:23:30.10:641,30,0	1/1:1,3:4:3.01:64,3,0	0/0:9,0:9:6.02:0,6,89	0/0:10,0:10:24.06:0,24,467	1/1:6,8:14:6.02:128,6,0	1/1:2,11:13:30.10:642,30,0	1/1:7,7:14:12.04:257,12,0	1/1:10,3:13:6.02:128,6,0	1/1:3,5:8:18.06:385,18,0	1/1:3,7:10:18.05:327,18,0	1/1:0,7:7:15.05:293,15,0	1/1:4,12:16:36.12:735,36,0	1/1:1,7:8:21.07:449,21,0	1/1:4,7:12:21.07:449,21,0	1/1:3,8:11:21.07:422,21,0	1/1:5,6:11:18.06:376,18,0	1/1:3,3:6:3.01:64,3,0	1/1:2,6:8:15.05:321,15,0	1/1:3,8:11:21.06:368,21,0	1/1:0,10:10:27.09:515,27,0	1/1:6,8:14:3.90:66,4,0	1/1:1,9:10:18.06:385,18,0	1/1:2,7:9:6.02:128,6,0	1/1:5,3:8:6.02:128,6,0	1/1:5,8:14:24.08:486,24,0	1/1:4,4:8:9.50:170,10,0	1/1:2,9:11:24.08:514,24,0	1/1:1,2:3:6.02:128,6,0
chr10	38372094	.	CCCCCA	C	3716.74	PASS	AB=0.965;AC=35;AF=0.625;AN=56;BaseQRankSum=7.512;DP=285;FS=15.585;HRun=0;HaplotypeScore=93.3588;InbreedingCoeff=-0.3418;MQ=68.68;MQ0=0;MQRankSum=-7.617;QD=13.97;ReadPosRankSum=9.755;VQSLOD=0.6205;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:21,2:23:99:273,0,127	1/1:3,0:3:3.01:32,3,0	0/0:7,0:7:12.03:0,12,137	0/0:12,0:12:29.44:0,29,531	0/1:11,2:13:51.36:52,0,51	1/1:12,0:12:30.08:320,30,0	0/1:12,1:13:99:104,0,100	0/1:10,0:10:51.90:52,0,52	0/1:8,2:10:18.17:169,0,18	0/1:9,0:9:18.83:121,0,19	1/1:8,0:8:13.59:133,14,0	0/1:16,1:17:68.95:303,0,69	1/1:8,1:9:21.05:225,21,0	0/1:12,0:12:36.09:198,0,36	0/1:10,1:11:8.04:174,0,8	0/1:9,0:9:40.14:159,0,40	0/1:6,0:6:22.92:23,0,43	1/1:9,0:9:15.04:160,15,0	0/1:11,0:11:71.13:117,0,71	1/1:12,0:12:24.89:225,25,0	0/1:14,0:14:22.94:23,0,55	1/1:9,0:9:18.05:192,18,0	0/1:9,0:9:22.90:55,0,23	0/1:7,0:7:23.15:55,0,23	0/1:12,0:12:28.34:200,0,28	0/1:6,0:6:49.41:58,0,49	1/1:10,0:10:2.86:232,3,0	1/1:2,0:2:6.02:64,6,0
chr10	38373619	.	C	CGTGCGTGTGTGTGTGTGT	14643.41	PASS	AB=1.000;AC=39;AF=0.722;AN=54;BaseQRankSum=-0.002;DP=660;FS=14.199;HRun=0;HaplotypeScore=283.3521;InbreedingCoeff=0.2946;MQ=67.73;MQ0=9;MQRankSum=-5.598;QD=27.84;ReadPosRankSum=-2.150;VQSLOD=2.1861;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:33,0:28:24.26:200,24,0	0/1:6,0:6:17.70:51,0,18	0/0:32,0:24:60.08:0,60,613	0/0:41,0:27:18.33:0,18,469	0/1:17,0:17:26.10:26,0,75	1/1:19,0:18:21.40:504,21,0	1/1:13,0:32:17.16:650,17,0	1/1:27,0:27:74.48:1092,74,0	0/1:24,0:24:42.87:684,0,43	1/1:34,0:32:69.18:1670,69,0	./.	1/1:15,10:28:16.69:1243,17,0	0/1:15,0:15:99:405,0,111	0/0:23,0:21:17.77:0,18,128	0/0:26,0:26:14.89:0,15,123	0/1:27,0:27:99:276,0,149	0/1:25,0:25:99:398,0,228	1/1:13,0:13:35.17:1237,35,0	1/1:24,0:21:56.20:1394,56,0	1/1:16,0:15:8.88:58,9,0	1/1:39,0:39:55.48:429,55,0	0/1:17,0:16:15.89:16,0,39	1/1:9,0:9:9.01:312,9,0	1/1:22,0:37:19.36:943,19,0	1/1:15,6:22:6.02:503,6,0	1/1:23,0:22:55.19:1557,55,0	1/1:8,12:26:6.58:955,7,0	1/1:7,0:6:5.92:39,6,0
chr10	38373621	.	T	TGC	2725.60	PASS	AB=0.996;AC=27;AF=0.500;AN=54;BaseQRankSum=0.902;DP=634;FS=4.162;HRun=0;HaplotypeScore=200.7092;InbreedingCoeff=0.3958;MQ=65.65;MQ0=9;MQRankSum=-2.396;QD=6.62;ReadPosRankSum=1.547;VQSLOD=3.2182;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:33,0:28:23.40:160,23,0	0/0:6,0:6:3:0,3,25	0/0:33,0:24:63.06:0,63,634	0/0:40,0:25:19.63:0,20,441	0/1:17,0:17:5.23:5,0,74	1/1:18,0:17:15.74:102,16,0	0/1:27,1:28:4.12:98,0,4	1/1:27,0:27:74.18:600,74,0	0/1:23,0:23:7.26:7,0,68	1/1:12,21:31:27.21:387,27,0	./.	0/1:26,0:24:3.44:145,0,3	0/0:15,0:15:19.21:0,19,146	0/0:23,0:21:20.77:0,21,152	0/0:26,0:26:17.98:0,18,149	0/0:26,0:26:18.42:0,18,207	0/0:23,0:23:35.18:0,35,291	1/1:14,0:14:4.03:168,4,0	1/1:25,0:21:11.63:202,12,0	0/1:17,0:16:13.04:46,0,13	1/1:38,0:38:53.46:373,53,0	0/0:18,0:17:5.57:0,6,47	0/1:8,0:8:0.41:29,0,0	1/1:31,0:30:20.58:164,21,0	1/1:23,0:21:6.02:67,6,0	0/1:23,0:22:15.86:230,0,16	0/1:24,0:23:1.01:94,0,1	0/1:4,0:3:10.05:30,0,10
chr10	38374644	.	T	TCC	2977.66	PASS	AB=0.644;AC=50;AF=0.893;AN=56;BaseQRankSum=-2.997;DP=362;FS=0.000;HRun=10;HaplotypeScore=96.0971;InbreedingCoeff=0.5286;MQ=79.39;MQ0=1;MQRankSum=-6.487;QD=9.08;ReadPosRankSum=-0.957;VQSLOD=0.9890;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:8,11:18:0:0,0,0	1/1:4,0:4:9.01:92,9,0	0/0:20,0:20:40.54:0,41,376	0/0:13,0:13:17.03:0,17,149	1/1:9,0:9:6.01:82,6,0	1/1:3,5:8:5.99:89,6,0	1/1:6,10:17:9.03:117,9,0	1/1:8,4:13:3.48:46,3,0	1/1:18,0:18:20.74:241,21,0	1/1:4,7:13:17.52:192,18,0	1/1:6,1:7:8.97:89,9,0	1/1:16,4:23:26.81:274,27,0	1/1:16,1:17:12.02:165,12,0	1/1:9,0:10:4.20:23,4,0	1/1:16,0:15:15.91:180,16,0	1/1:13,0:13:14.95:148,15,0	1/1:21,0:21:18.01:171,18,0	1/1:10,3:14:23.55:296,24,0	1/1:7,0:7:11.10:93,11,0	1/1:8,0:8:6.02:78,6,0	0/1:8,1:17:0:0,0,0	1/1:11,1:12:15.04:220,15,0	1/1:6,0:6:6.02:88,6,0	1/1:9,1:17:1.82:5,2,0	1/1:15,0:16:18.01:182,18,0	1/1:5,3:8:9.03:123,9,0	1/1:6,0:9:6.49:82,6,0	1/1:2,0:6:3:28,3,0
chr10	38374730	.	T	TAGCCATGAAG	62611.08	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-0.468;DP=621;FS=29.533;HRun=0;HaplotypeScore=217.5603;InbreedingCoeff=0.9883;MQ=78.98;MQ0=0;MQRankSum=-10.830;QD=110.43;ReadPosRankSum=3.733;VQSLOD=3.8486;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:13,16:30:72.20:3077,72,0	1/1:2,6:8:24.03:1063,24,0	0/0:25,0:25:57.58:0,58,1513	0/0:29,0:29:68.12:0,68,1648	1/1:10,13:26:56.96:2076,57,0	1/1:2,10:13:36.06:1706,36,0	1/1:10,11:25:45.09:1978,45,0	1/1:30,6:36:96.32:3881,96,0	1/1:9,23:32:81.21:3860,81,0	1/1:10,8:18:51.18:2421,51,0	1/1:15,10:25:63.13:2448,63,0	1/1:4,13:18:51.04:2277,51,0	1/1:13,19:34:99:4355,99,0	1/1:6,11:18:51.11:2365,51,0	1/1:5,23:29:78.06:3605,78,0	1/1:7,16:23:66.23:3229,66,0	1/1:8,6:16:27.09:1248,27,0	1/1:9,6:15:36.12:1774,36,0	1/1:8,4:12:24.55:909,25,0	1/1:12,22:34:93.17:4016,93,0	1/1:17,2:19:26.76:738,27,0	1/1:13,16:31:87.21:3840,87,0	1/1:10,7:17:47.82:1530,48,0	1/1:5,5:10:17.99:809,18,0	1/1:11,12:23:60.07:2418,60,0	1/1:10,12:22:66.23:3055,66,0	1/1:8,18:26:72.20:3509,72,0	1/1:6,0:6:17.86:425,18,0
chr10	38374741	.	AGTC	A	8457.20	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=0.560;DP=549;FS=21.687;HRun=0;HaplotypeScore=255.4195;InbreedingCoeff=0.9947;MQ=87.10;MQ0=0;MQRankSum=-5.021;QD=45.96;ReadPosRankSum=-1.472;VQSLOD=3.4671;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:26:63.22:0,63,1437	0/0:9,0:9:27.09:0,27,634	0/0:24,0:24:51.52:0,52,1287	0/0:33,0:33:90.29:0,90,1909	0/0:20,0:20:48.16:0,48,1064	0/0:16,0:16:39.13:0,39,918	0/0:23,0:23:42.14:0,42,944	1/1:0,24:24:72.25:1270,72,0	0/0:31,0:31:72.24:0,72,1688	1/1:0,12:12:36.11:591,36,0	1/1:0,18:18:45.03:650,45,0	0/0:19,0:19:54.18:0,54,1232	0/0:29,0:29:81.28:0,81,1850	0/0:17,0:17:42.14:0,42,972	0/0:33,0:33:78.26:0,78,1762	0/0:23,0:23:66.23:0,66,1550	0/0:12,0:12:24.08:0,24,525	1/1:0,10:10:30.10:529,30,0	1/1:0,12:12:33.06:546,33,0	1/1:0,30:30:90.13:1409,90,0	1/1:0,11:11:17.97:222,18,0	0/0:24,0:24:50.65:0,51,1193	0/0:14,0:14:39.13:0,39,859	0/0:11,0:11:14.83:0,15,299	1/1:0,19:19:54.05:821,54,0	1/1:0,17:17:51.17:893,51,0	1/1:0,25:25:72.20:1236,72,0	1/1:0,6:6:18.06:291,18,0
chr10	38375139	.	TTGTA	T	4096.95	PASS	AC=42;AF=0.840;AN=50;BaseQRankSum=4.666;DP=685;FS=0.000;HRun=0;HaplotypeScore=135.1663;InbreedingCoeff=0.7249;MQ=63.17;MQ0=1;MQRankSum=-1.667;QD=8.43;ReadPosRankSum=1.080;VQSLOD=2.5085;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:52:24.04:0,24,376	1/1:8,6:15:21.06:302,21,0	./.	./.	1/1:19,13:32:30.01:393,30,0	0/0:26,0:26:36.11:0,36,701	0/0:31,0:31:27.09:0,27,580	./.	1/1:3,16:19:33.11:502,33,0	1/1:15,0:23:17.98:160,18,0	1/1:11,0:18:3:28,3,0	1/1:22,0:22:27.03:251,27,0	1/1:14,10:24:8.80:137,9,0	1/1:18,12:30:18.06:274,18,0	1/1:14,11:25:27.09:410,27,0	0/0:13,0:24:36.08:0,36,565	1/1:10,9:19:18.06:274,18,0	1/1:19,0:19:10.20:100,10,0	1/1:19,0:21:3:26,3,0	1/1:15,0:28:12.75:98,13,0	1/1:22,0:22:3.01:51,3,0	1/1:17,10:27:27.05:364,27,0	1/1:21,0:21:11.79:103,12,0	1/1:21,0:21:6.11:177,6,0	1/1:12,0:24:3.47:29,3,0	1/1:15,0:24:21.50:196,21,0	1/1:18,0:34:21.02:195,21,0	1/1:12,0:18:3:28,3,0
chr10	38375142	.	TATGTA	T	2022.98	PASS	AB=0.986;AC=13;AF=0.232;AN=56;BaseQRankSum=8.790;DP=675;FS=15.672;HRun=0;HaplotypeScore=149.3022;InbreedingCoeff=0.2282;MQ=62.57;MQ0=1;MQRankSum=-4.545;QD=8.61;ReadPosRankSum=-0.909;VQSLOD=1.9483;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:89.51:0,90,1689	0/0:15,0:15:1.37:0,1,254	0/0:20,0:14:33.08:0,33,457	0/0:17,0:14:39.13:0,39,554	0/0:30,0:30:64.20:0,64,793	0/0:27,0:27:66.22:0,66,1614	0/0:30,0:30:87.77:0,88,1775	0/0:28,0:27:75.24:0,75,1079	0/0:19,0:19:15.35:0,15,113	0/1:22,0:23:93.75:94,0,581	0/0:18,0:18:4.74:0,5,356	1/1:0,24:24:27.09:628,27,0	0/0:24,0:24:44.78:0,45,601	0/0:30,0:30:53.48:0,53,716	0/0:24,0:24:47.10:0,47,600	0/0:23,0:23:63.21:0,63,1378	0/0:18,0:18:29.40:0,29,365	0/1:17,0:19:99:127,0,419	0/0:20,0:20:3.11:0,3,599	0/1:28,0:28:99:171,0,199	0/1:22,0:22:7.09:7,0,487	0/0:27,0:27:59.98:0,60,729	1/1:0,19:19:12.03:271,12,0	1/1:1,19:21:24.06:511,24,0	0/1:23,0:23:45.52:46,0,239	0/1:23,0:23:99:195,0,527	0/1:33,0:33:99:140,0,636	0/0:18,0:18:7.35:0,7,444
chr10	38375479	.	T	TACACAC	2912.85	PASS	AB=0.976;AC=29;AF=0.580;AN=50;BaseQRankSum=2.077;DP=558;FS=2.093;HRun=0;HaplotypeScore=155.9270;InbreedingCoeff=0.7841;MQ=62.43;MQ0=6;MQRankSum=-5.078;QD=9.22;ReadPosRankSum=-3.291;VQSLOD=2.2102;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:1.69:0,2,4	0/0:15,0:15:32.10:0,32,516	./.	./.	0/0:24,0:24:17.64:0,18,336	1/1:23,0:23:8.85:146,9,0	1/1:28,0:28:11.20:194,11,0	1/1:32,0:31:13.93:88,14,0	0/0:16,0:15:28.24:0,28,505	1/1:24,0:24:28.84:419,29,0	1/1:11,0:11:3.01:66,3,0	1/1:25,0:25:14.95:263,15,0	0/0:13,0:13:21.07:0,21,369	0/0:11,0:9:12.02:0,12,186	0/0:18,0:18:29.81:0,30,527	0/0:21,0:21:32.90:0,33,641	0/0:28,0:28:34.90:0,35,555	1/1:14,0:14:19.52:259,20,0	1/1:18,0:17:11.99:167,12,0	1/1:13,0:13:6.02:146,6,0	1/1:36,0:36:23.89:387,24,0	0/0:17,0:17:22.33:0,22,301	./.	0/1:40,0:41:3.90:303,0,4	1/1:14,0:15:3:28,3,0	1/1:12,6:19:21:341,21,0	1/1:6,1:14:9.03:228,9,0	1/1:3,0:2:5.99:70,6,0
chr10	38375519	.	C	CACACACACAA	9620.19	PASS	AB=1.000;AC=43;AF=0.768;AN=56;BaseQRankSum=-7.312;DP=659;FS=9.964;HRun=0;HaplotypeScore=196.7963;InbreedingCoeff=0.0751;MQ=59.53;MQ0=16;MQRankSum=-1.269;QD=16.11;ReadPosRankSum=-4.029;VQSLOD=2.0152;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:44,0:44:81.18:661,81,0	0/1:16,0:16:83.31:83,0,500	0/0:32,0:16:42:0,42,434	0/0:30,0:15:38.11:0,38,390	0/1:31,0:31:99:261,0,369	1/1:20,0:20:32.72:370,33,0	1/1:25,0:25:59.92:736,60,0	1/1:31,0:28:10.84:432,11,0	0/1:26,0:25:99:244,0,544	1/1:7,0:26:62.54:758,63,0	1/1:2,0:11:18.32:192,18,0	1/1:25,1:26:54.17:803,54,0	0/1:15,0:15:99:151,0,353	0/1:9,0:7:63.08:63,0,169	0/1:25,0:25:99:268,0,475	0/1:26,0:26:99:245,0,589	0/1:30,0:30:99:212,0,628	1/1:18,0:18:39.80:352,40,0	1/1:13,0:13:38.58:431,39,0	1/1:2,0:19:18.23:276,18,0	1/1:41,0:41:63.04:880,63,0	0/1:22,0:22:99:241,0,249	1/1:9,0:9:20.30:151,20,0	1/1:12,19:41:19:724,19,0	1/1:4,0:20:2.97:20,3,0	1/1:21,0:21:40.90:466,41,0	1/1:22,0:21:38.06:398,38,0	1/1:9,0:8:23.84:200,24,0
chr10	38377484	.	A	AGTGTGTGT	1721.10	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=-1.604;DP=854;FS=24.640;HRun=0;HaplotypeScore=279.5821;InbreedingCoeff=0.3415;MQ=65.75;MQ0=9;MQRankSum=0.993;QD=5.70;ReadPosRankSum=4.762;VQSLOD=0.8089;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:32,0:31:29.44:252,29,0	0/1:11,0:11:57.23:62,0,57	0/0:36,0:27:30.04:0,30,420	0/0:34,0:24:31.25:0,31,409	0/1:31,0:31:7.39:7,0,593	0/0:29,0:30:30.03:0,30,354	0/0:24,0:23:39.08:0,39,507	0/0:38,0:38:26.82:0,27,816	0/1:29,0:29:54.72:55,0,627	0/0:47,0:46:99:0,105,1591	0/0:24,0:25:35.53:0,36,429	1/1:14,19:36:19.78:675,20,0	0/1:53,0:53:47.78:48,0,626	0/0:35,0:35:17.97:0,18,827	0/1:33,0:33:29.16:29,0,481	0/0:42,0:41:25.38:0,25,871	0/1:17,0:17:36.22:36,0,283	0/0:14,0:14:39.13:0,39,637	0/0:28,0:27:3.12:0,3,463	0/0:28,0:27:35.51:0,36,622	0/0:34,0:34:40.20:0,40,704	0/0:29,0:29:5.01:0,5,261	1/1:23,0:22:25.56:491,26,0	1/1:15,0:14:13.37:236,13,0	0/0:32,0:32:26.62:0,27,762	0/0:28,0:28:59.77:0,60,988	0/0:44,0:44:73.33:0,73,1045	0/1:14,0:17:5.64:6,0,459
chr10	38377499	.	GTGTGTATGTA	G	1972.77	PASS	AB=0.969;AC=12;AF=0.214;AN=56;BaseQRankSum=8.978;DP=858;FS=13.928;HRun=0;HaplotypeScore=300.0939;InbreedingCoeff=-0.2874;MQ=56.29;MQ0=10;MQRankSum=0.201;QD=5.36;ReadPosRankSum=-2.404;VQSLOD=0.4766;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:37,0:32:56.86:136,0,57	0/1:14,0:14:16.41:16,0,585	0/0:18,0:11:30.10:0,30,420	0/0:27,0:17:33.57:0,34,442	0/0:31,0:31:57.72:0,58,1952	0/1:29,0:28:5.58:6,0,289	0/0:27,0:26:37.20:0,37,438	0/1:40,0:37:99:197,0,747	0/0:35,0:35:69.66:0,70,2236	0/1:43,1:43:99:488,0,733	0/0:26,0:26:2.65:0,3,285	0/0:32,0:32:23.01:0,23,659	0/0:50,0:50:99:0,137,3862	0/0:37,0:37:96.28:0,96,2909	0/0:38,0:38:43.68:0,44,1926	0/0:45,0:44:99:0,121,3363	0/0:16,0:16:25.17:0,25,856	0/1:19,0:19:99:113,0,374	0/1:27,0:25:99:258,0,238	0/1:29,1:29:45.66:46,0,452	0/1:39,0:38:36.67:37,0,394	0/0:31,0:31:75.15:0,75,1834	0/0:26,0:24:31.22:0,31,647	0/0:21,0:20:2.18:0,2,616	0/0:30,0:30:52.65:0,53,552	0/1:18,13:30:99:451,0,448	0/1:38,1:39:99:220,0,593	0/1:19,0:19:99:153,0,204
chr10	38377501	.	GTGTATGTA	G	5862.58	PASS	AB=0.928;AC=30;AF=0.556;AN=54;BaseQRankSum=2.870;DP=856;FS=19.055;HRun=0;HaplotypeScore=260.8568;InbreedingCoeff=0.5485;MQ=56.11;MQ0=12;MQRankSum=-2.633;QD=11.21;ReadPosRankSum=-3.772;VQSLOD=1.6148;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:35,0:30:11.82:179,12,0	0/1:14,0:14:34.94:35,0,264	0/0:18,0:11:0.47:0,0,1	./.	0/0:31,0:31:33.57:0,34,1079	1/1:15,0:28:3.48:36,3,0	0/1:13,0:24:0:1,0,0	1/1:38,0:35:17.99:219,18,0	0/0:35,0:35:37.66:0,38,1362	1/1:23,21:43:30.83:1410,31,0	1/1:9,16:26:20.71:225,21,0	0/0:34,0:34:20.63:0,21,356	0/0:50,0:50:82.96:0,83,2338	0/0:36,0:36:63.19:0,63,1906	0/1:37,0:37:46.74:47,0,1052	0/0:47,0:46:69.01:0,69,2040	0/1:16,0:17:6.38:6,0,531	0/1:18,1:19:11.78:364,0,12	1/1:17,10:25:33.11:698,33,0	1/1:16,14:29:25.49:263,25,0	1/1:42,0:41:9.47:291,9,0	0/0:29,0:29:35.98:0,36,1002	0/0:26,0:24:20.76:0,21,400	0/1:21,0:20:27.40:27,0,408	1/1:12,18:30:37:442,37,0	1/1:29,2:30:48.06:717,48,0	1/1:21,17:39:32.45:695,32,0	1/1:9,10:19:14.41:207,14,0
chr10	38377607	.	A	ATG	1260.69	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=-5.076;DP=918;FS=12.473;HRun=0;HaplotypeScore=123.2518;InbreedingCoeff=0.7079;MQ=58.15;MQ0=5;MQRankSum=1.812;QD=21.01;ReadPosRankSum=-1.559;VQSLOD=3.3852;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,36:45:84.29:1355,84,0	0/0:19,0:19:54.17:0,54,665	0/0:28,0:14:29.85:0,30,368	0/0:28,0:11:20.88:0,21,236	0/0:40,0:40:99:0,111,1317	0/0:32,0:32:69.22:0,69,849	0/0:19,0:19:32.90:0,33,379	0/0:41,0:40:74.70:0,75,870	0/0:36,0:36:96.02:0,96,1142	0/0:33,0:33:84.25:0,84,1013	0/0:22,0:22:45.14:0,45,554	0/0:47,0:47:99:0,114,1377	0/0:52,0:52:99:0,144,1760	0/0:39,0:39:99:0,102,1242	0/0:46,0:46:99:0,117,1377	0/0:40,1:40:99:0,102,1229	0/0:31,0:31:69.19:0,69,834	0/0:17,0:17:45.11:0,45,534	0/0:29,0:28:57.14:0,57,686	0/0:27,0:27:72.21:0,72,874	0/0:42,0:42:83.83:0,84,993	0/0:24,0:24:48.11:0,48,578	0/0:23,0:24:60.01:0,60,703	0/0:50,0:50:99:0,117,1390	0/0:31,0:31:81.25:0,81,991	0/0:34,0:34:84.24:0,84,1009	0/0:26,0:26:63.18:0,63,761	0/1:15,0:15:4.98:5,0,268
chr10	38379833	.	C	CAT	545.89	PASS	AB=0.961;AC=15;AF=0.268;AN=56;BaseQRankSum=4.228;DP=713;FS=11.046;HRun=0;HaplotypeScore=135.8084;InbreedingCoeff=-0.2303;MQ=46.18;MQ0=19;MQRankSum=-3.896;QD=1.59;ReadPosRankSum=1.160;VQSLOD=2.1184;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:32:13.09:0,13,252	0/1:9,0:9:10.37:10,0,16	0/0:26,0:5:11.46:0,11,68	0/0:54,0:10:17.19:0,17,189	0/1:24,0:24:15.63:16,0,78	0/0:26,0:26:62.12:0,62,664	0/0:31,0:31:71.47:0,71,785	0/1:38,0:37:99:103,0,440	0/0:20,0:20:12.45:0,12,99	0/1:31,0:30:99:116,0,131	0/1:11,4:15:37.67:43,0,38	0/0:26,0:24:10.93:0,11,96	0/0:18,0:18:4.91:0,5,107	0/0:20,0:20:12.80:0,13,146	0/0:27,0:27:15.66:0,16,105	0/0:23,0:23:14.89:0,15,142	0/1:28,0:28:3.84:4,0,37	0/1:9,5:13:36.20:36,0,128	0/1:24,0:23:26.77:27,0,279	0/1:27,0:26:40.29:40,0,163	0/1:36,0:33:54.16:54,0,197	0/0:22,0:22:26.24:0,26,198	0/0:20,0:20:26.19:0,26,190	0/0:24,0:23:4.24:0,4,72	0/1:35,1:35:99:133,0,178	0/1:32,0:31:57.69:58,0,193	0/1:22,0:18:20.55:21,0,104	1/1:1,2:7:5.60:40,6,0
chr10	38379835	.	C	CACACACACACAT	3724.79	PASS	AB=0.984;AC=27;AF=0.482;AN=56;BaseQRankSum=4.305;DP=719;FS=1.609;HRun=0;HaplotypeScore=214.3585;InbreedingCoeff=-0.4333;MQ=46.28;MQ0=18;MQRankSum=-2.759;QD=6.66;ReadPosRankSum=4.101;VQSLOD=2.6580;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:32,0:31:33.04:33,0,110	1/1:9,0:9:2.95:149,3,0	0/0:25,0:7:2.19:0,2,37	0/0:53,0:11:11.86:0,12,99	0/0:23,0:23:8.99:0,9,75	0/0:27,0:27:60.02:0,60,1025	0/0:32,0:32:55.38:0,55,968	0/1:33,0:32:52.50:53,0,289	0/1:21,0:21:32.90:131,0,33	0/1:29,0:28:99:158,0,166	0/1:18,0:18:24:45,0,24	1/1:26,0:25:19.92:249,20,0	0/1:19,0:19:96.38:267,0,96	0/1:20,0:20:99:165,0,115	0/1:25,0:25:33.85:394,0,34	0/1:23,0:23:30.88:472,0,31	1/1:26,0:26:9.03:376,9,0	0/1:14,0:14:39.44:148,0,39	0/1:17,6:30:78.73:400,0,79	0/1:28,0:26:56.18:56,0,98	0/1:37,0:34:97.71:137,0,98	0/1:22,0:22:31.95:101,0,32	0/1:22,0:22:23.91:24,0,102	0/1:24,0:23:36.60:117,0,37	0/1:37,0:36:62.01:62,0,191	0/1:31,0:30:84.68:85,0,149	0/1:23,0:19:6.61:7,0,87	1/1:7,0:7:5.85:97,6,0
chr10	38379841	.	C	CACACACACACAT	5024.22	PASS	AB=0.943;AC=30;AF=0.556;AN=54;BaseQRankSum=-0.954;DP=751;FS=5.023;HRun=0;HaplotypeScore=211.9252;InbreedingCoeff=-0.3080;MQ=50.84;MQ0=18;MQRankSum=-1.618;QD=8.57;ReadPosRankSum=8.933;VQSLOD=2.5260;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:31,0:30:26.21:26,0,116	1/1:0,5:8:2.95:178,3,0	0/0:28,0:9:16.88:0,17,165	0/0:50,0:12:8.12:0,8,95	./.	0/0:27,0:27:59.78:0,60,1018	0/0:33,0:33:56.87:0,57,974	0/1:32,0:31:99:170,0,314	0/1:4,14:20:0.98:171,0,1	0/1:28,0:27:99:432,0,137	0/1:19,0:19:25.95:26,0,122	0/1:27,0:26:89.11:120,0,89	0/1:5,13:21:22.12:347,0,22	1/1:22,0:23:29.90:499,30,0	1/1:3,25:34:1.07:503,1,0	1/1:7,15:30:1.06:612,1,0	1/1:5,16:30:6.02:297,6,0	0/1:17,0:16:57.09:267,0,57	0/1:31,0:29:99:268,0,171	0/1:26,0:24:65.65:176,0,66	0/1:39,0:35:99:221,0,167	1/1:9,0:20:4:207,4,0	0/1:21,0:21:23.98:24,0,115	0/1:27,0:25:19.52:20,0,54	0/1:38,0:37:74.39:74,0,179	0/1:35,0:34:99:187,0,168	0/1:21,0:18:67.86:105,0,68	1/1:7,0:7:5.89:96,6,0
chr10	38380147	.	TA	T	4638.60	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=8.326;DP=599;FS=8.424;HRun=6;HaplotypeScore=64.5294;InbreedingCoeff=0.9210;MQ=71.40;MQ0=1;MQRankSum=-0.890;QD=23.67;ReadPosRankSum=2.388;VQSLOD=4.2113;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:34.66:0,35,238	1/1:0,4:4:12.03:128,12,0	0/0:21,0:15:13.74:0,14,126	0/1:14,0:12:8.80:9,0,111	1/1:0,29:29:71.74:680,72,0	0/0:28,0:28:75.23:0,75,943	0/0:17,0:17:45.09:0,45,520	0/0:34,0:34:84.22:0,84,1018	1/1:1,20:21:51.13:544,51,0	0/0:34,0:34:90.25:0,90,1081	0/0:19,0:19:54.06:0,54,596	0/0:19,0:19:57.16:0,57,699	1/1:2,19:21:51.13:543,51,0	1/1:2,18:20:51.13:545,51,0	1/1:2,29:31:72.18:769,72,0	1/1:3,10:13:36.07:373,36,0	1/1:2,22:24:54.14:576,54,0	0/0:8,0:8:24.08:0,24,305	0/0:26,0:26:66.17:0,66,800	0/0:30,0:30:81.18:0,81,948	0/0:19,0:19:51.13:0,51,610	1/1:0,19:19:47.96:472,48,0	0/0:20,0:20:47.89:0,48,574	0/0:15,0:15:42.12:0,42,522	0/0:14,0:14:42.12:0,42,512	0/0:25,0:25:69.60:0,70,823	0/0:28,0:28:78.06:0,78,906	0/0:10,0:10:30.08:0,30,367
chr10	38380423	.	TTAA	T	16053.45	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-0.469;DP=599;FS=3.157;HRun=0;HaplotypeScore=121.0982;InbreedingCoeff=0.9872;MQ=75.31;MQ0=0;MQRankSum=-6.849;QD=31.29;ReadPosRankSum=3.872;VQSLOD=4.9642;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,0:48:99:1218,107,0	1/1:0,0:4:12.04:145,12,0	0/0:34,0:23:48.80:0,49,590	0/0:17,0:14:20.36:0,20,251	1/1:1,0:16:38.69:428,39,0	0/0:21,0:21:63.18:0,63,849	0/0:13,0:13:30.04:0,30,333	1/1:0,30:31:87.57:1184,88,0	1/1:0,0:20:36.04:421,36,0	1/1:0,19:19:57.14:877,57,0	1/1:0,13:13:23.31:362,23,0	1/1:0,0:15:27.08:323,27,0	1/1:1,0:16:39.08:458,39,0	1/1:0,0:20:36.07:420,36,0	1/1:0,0:31:78.04:917,78,0	1/1:0,0:20:45.14:553,45,0	1/1:0,0:31:66.12:797,66,0	1/1:0,20:20:48.12:826,48,0	1/1:0,22:23:68.93:928,69,0	1/1:0,26:26:68.83:858,69,0	1/1:0,24:25:47.43:759,47,0	1/1:0,0:21:59.71:589,60,0	1/1:0,0:15:28.33:331,28,0	1/1:0,0:17:29.46:338,29,0	1/1:0,15:15:27.09:471,27,0	1/1:0,26:28:84.17:1221,84,0	1/1:0,28:29:78.21:1271,78,0	1/1:0,9:10:21.07:360,21,0
chr10	38380424	.	TA	T	2673.73	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-0.426;DP=598;FS=0.000;HRun=14;HaplotypeScore=149.8263;InbreedingCoeff=0.8557;MQ=74.66;MQ0=0;MQRankSum=-4.061;QD=4.89;ReadPosRankSum=4.280;VQSLOD=1.3249;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:48,0:48:76.57:228,77,0	1/1:4,0:4:8.33:25,8,0	0/0:34,0:23:35.22:0,35,258	0/0:17,0:13:4.40:0,4,31	1/1:16,0:16:21.06:64,21,0	1/1:4,17:21:25.70:322,26,0	1/1:4,9:13:17.84:123,18,0	1/1:31,0:31:44.63:148,45,0	1/1:20,0:20:25.73:77,26,0	1/1:19,0:19:35.33:109,35,0	1/1:13,0:13:15.63:55,16,0	1/1:15,0:15:18.88:57,19,0	1/1:15,0:16:25.54:77,26,0	1/1:20,0:20:23.51:70,24,0	1/1:31,0:31:55.67:167,56,0	1/1:20,0:20:32.20:97,32,0	1/1:31,0:31:47.56:142,48,0	1/1:20,0:20:32.57:98,33,0	1/1:23,0:23:36.22:114,36,0	1/1:26,0:26:37.31:125,37,0	1/1:25,0:25:27.89:85,28,0	1/1:21,0:21:25.70:78,26,0	1/1:15,0:15:19.90:59,20,0	1/1:17,0:17:20.68:62,21,0	1/1:15,0:15:18.88:58,19,0	1/1:28,0:28:48.11:150,48,0	1/1:29,0:29:53.18:162,53,0	1/1:10,0:10:15.18:46,15,0
chr10	38380716	.	TAC	T	1424.15	PASS	AB=0.882;AC=23;AF=0.605;AN=38;BaseQRankSum=0.324;DP=540;FS=1.234;HRun=0;HaplotypeScore=151.7015;InbreedingCoeff=0.3295;MQ=61.34;MQ0=14;MQRankSum=2.833;QD=4.67;ReadPosRankSum=-0.878;VQSLOD=3.1668;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:38,0:40:8.59:9,0,24	0/0:5,0:6:0.47:0,0,1	./.	./.	./.	0/0:12,0:12:7.98:0,8,48	0/1:24,0:23:5.08:5,0,179	0/0:23,0:23:2.92:0,3,8	./.	1/1:19,1:19:11.63:78,12,0	1/1:5,5:10:18.04:192,18,0	0/1:14,0:19:4.16:22,0,4	./.	0/0:9,0:13:2.94:0,3,18	./.	./.	0/0:12,0:14:0.85:0,1,2	1/1:11,7:18:26.86:260,27,0	1/1:11,2:13:25.76:197,26,0	1/1:15,5:19:17.74:154,18,0	0/1:28,4:30:24.33:189,0,24	./.	0/1:9,0:12:0:0,0,0	1/1:34,0:37:1.24:3,1,0	1/1:22,1:23:17.99:169,18,0	1/1:12,3:16:5.94:136,6,0	1/1:14,1:15:16.27:132,16,0	./.
chr10	38380783	.	A	ACT	5764.28	PASS	AB=0.946;AC=38;AF=0.679;AN=56;BaseQRankSum=5.188;DP=693;FS=4.789;HRun=0;HaplotypeScore=190.9983;InbreedingCoeff=0.8356;MQ=49.02;MQ0=21;MQRankSum=-5.128;QD=13.79;ReadPosRankSum=-5.094;VQSLOD=3.6393;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:58.06:0,58,579	1/1:12,0:13:20.94:184,21,0	0/0:64,0:23:10.10:0,10,185	0/0:52,0:21:30.52:0,31,400	1/1:17,0:17:8.74:61,9,0	0/0:15,0:15:44.78:0,45,455	0/0:22,0:22:56.78:0,57,554	1/1:24,0:28:38.80:320,39,0	1/1:21,0:20:27.01:249,27,0	1/1:19,1:20:31.73:425,32,0	1/1:13,0:14:11.03:188,11,0	0/0:24,0:24:44.89:0,45,363	1/1:20,0:20:30.39:255,30,0	1/1:30,0:30:41.86:350,42,0	1/1:22,0:22:47.68:400,48,0	1/1:14,0:13:14.94:126,15,0	1/1:11,0:11:10.20:75,10,0	1/1:22,2:24:22.40:356,22,0	1/1:23,0:22:32.45:285,32,0	1/1:22,1:22:35.97:420,36,0	0/1:48,1:48:0.75:603,0,1	1/1:16,0:17:20.48:152,20,0	0/0:22,0:22:38.89:0,39,322	0/0:40,0:40:83.79:0,84,684	0/1:16,1:18:14.54:217,0,15	1/1:29,1:30:28.39:591,28,0	1/1:16,1:18:30.46:357,30,0	1/1:3,1:4:12.04:148,12,0
chr10	38380795	.	T	TCTCA	11011.39	PASS	AB=0.582;AC=36;AF=0.643;AN=56;BaseQRankSum=0.490;DP=792;FS=2.113;HRun=0;HaplotypeScore=197.1747;InbreedingCoeff=0.6994;MQ=50.88;MQ0=21;MQRankSum=-4.680;QD=22.70;ReadPosRankSum=-1.185;VQSLOD=4.5968;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:39:78.15:0,78,941	1/1:2,0:15:21.07:370,21,0	0/0:68,0:23:24.50:0,25,283	0/0:54,0:24:36.49:0,36,517	1/1:4,0:22:11.90:131,12,0	0/0:18,0:19:53.79:0,54,715	0/0:32,0:32:66.92:0,67,964	1/1:25,0:25:53.79:529,54,0	1/1:3,0:27:27.09:489,27,0	1/1:4,14:20:18.33:792,18,0	0/1:5,11:17:33.14:398,0,33	0/0:7,0:27:30.15:0,30,557	1/1:2,0:26:30.21:489,30,0	1/1:6,0:35:39.48:679,39,0	1/1:2,0:34:48.05:808,48,0	1/1:4,0:18:17.91:282,18,0	1/1:3,0:13:10.22:127,10,0	1/1:7,12:21:35.23:646,35,0	1/1:5,12:20:33.44:474,33,0	1/1:9,18:31:41.40:839,41,0	0/1:15,35:53:42.75:1338,0,43	1/1:1,0:24:20.94:318,21,0	0/0:6,0:23:39.07:0,39,486	0/0:13,0:44:85.05:0,85,1006	0/1:9,0:25:14.65:400,0,15	0/1:6,20:32:2.17:1034,0,2	1/1:7,10:18:29.80:539,30,0	1/1:1,3:4:12.04:329,12,0
chr10	38382565	.	TTGTGTGTGTGTGTGTGTGTG	T	2021.60	PASS	AC=14;AF=0.280;AN=50;BaseQRankSum=4.786;DP=609;FS=12.082;HRun=0;HaplotypeScore=261.6257;InbreedingCoeff=0.7026;MQ=62.17;MQ0=18;MQRankSum=-3.115;QD=14.86;ReadPosRankSum=2.784;VQSLOD=0.6455;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:32.69:0,33,1636	1/1:11,0:11:6.02:154,6,0	./.	./.	0/0:16,3:17:0:0,0,0	0/0:12,0:12:2.59:0,3,261	0/0:29,0:27:30.10:0,30,1637	0/0:27,0:25:20.76:0,21,532	1/1:18,5:23:6.02:317,6,0	0/0:20,0:20:21.07:0,21,874	0/0:10,0:9:0.47:0,0,1	0/0:19,0:19:18.31:0,18,997	1/1:13,0:13:2.12:85,2,0	1/1:15,7:22:9.03:415,9,0	1/1:17,6:25:11.34:595,11,0	./.	1/1:23,5:28:12.04:559,12,0	0/0:23,0:33:34:0,34,1706	0/0:19,0:16:12.04:0,12,767	0/0:9,0:7:6.02:0,6,473	0/0:44,0:41:18.06:0,18,1083	1/1:9,5:14:3.01:52,3,0	0/0:12,0:12:6.02:0,6,459	0/0:37,0:38:36.12:0,36,2166	0/0:23,0:22:24.08:0,24,1420	0/0:28,0:28:32.47:0,32,1250	0/0:14,0:16:9.50:0,10,522	0/0:10,0:9:6.02:0,6,327
chr10	38382603	.	G	GA	90.28	PASS	AB=0.907;AC=4;AF=0.071;AN=56;BaseQRankSum=5.258;DP=509;FS=11.219;HRun=0;HaplotypeScore=78.4997;InbreedingCoeff=-0.1141;MQ=46.11;MQ0=43;MQRankSum=-2.168;QD=1.37;ReadPosRankSum=2.278;VQSLOD=0.6965;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:48.15:0,48,636	0/1:6,3:10:45.37:45,0,147	0/0:19,0:2:6.02:0,6,83	0/0:20,0:3:3.48:0,3,42	0/0:7,0:5:2.99:0,3,23	0/0:7,0:7:5.88:0,6,57	0/0:37,0:35:75.10:0,75,1032	0/0:17,0:12:36.12:0,36,499	0/0:15,0:15:23.05:0,23,265	0/0:13,0:10:30.09:0,30,397	0/0:8,0:6:5.66:0,6,67	0/0:20,0:19:38.13:0,38,499	0/1:19,2:20:5.28:5,0,492	0/1:16,0:16:59.31:59,0,193	0/0:19,0:19:0.11:0,0,322	0/0:11,0:11:21.06:0,21,273	0/1:19,0:19:82.76:83,0,239	0/0:34,0:32:56.37:0,56,734	0/0:11,0:7:21.07:0,21,280	0/0:7,0:6:15.04:0,15,195	0/0:40,0:31:39.11:0,39,525	0/0:20,0:19:15.13:0,15,358	0/0:9,0:8:12.04:0,12,166	0/0:45,0:43:77.20:0,77,991	0/0:18,0:17:36.07:0,36,450	0/0:16,0:13:30.93:0,31,452	0/0:13,0:13:24.88:0,25,299	0/0:7,0:6:9.03:0,9,123
chr10	38385037	.	T	TA	5179.13	PASS	AB=0.613;AC=24;AF=0.429;AN=56;BaseQRankSum=1.671;DP=551;FS=0.738;HRun=12;HaplotypeScore=98.6365;InbreedingCoeff=0.5583;MQ=68.62;MQ0=0;MQRankSum=-6.642;QD=16.65;ReadPosRankSum=-1.605;VQSLOD=4.7179;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:14,14:28:50.91:455,51,0	0/0:2,0:2:5.97:0,6,44	0/0:16,0:15:26.29:0,26,193	0/0:17,0:17:24.75:0,25,182	0/0:11,0:11:26.80:0,27,193	0/0:19,0:21:42.80:0,43,295	0/0:17,0:18:43.78:0,44,312	1/1:11,17:29:52.16:480,52,0	0/0:18,1:19:12.58:0,13,253	1/1:7,16:23:29.30:445,29,0	0/1:6,8:16:4.90:249,0,5	0/1:4,17:21:14.64:357,0,15	0/0:23,0:25:36.45:0,36,381	0/0:20,0:20:50.69:0,51,370	0/0:25,0:25:62.55:0,63,455	0/0:17,0:19:51.80:0,52,362	0/0:30,1:31:50.62:0,51,514	0/1:9,13:22:50.41:344,0,50	0/1:9,9:19:45.72:235,0,46	1/1:5,12:19:44.89:417,45,0	1/1:3,4:8:14.86:131,15,0	0/0:12,0:15:38.92:0,39,258	0/1:5,13:18:13.92:152,0,14	1/1:4,17:21:42.06:406,42,0	1/1:6,12:19:38.90:364,39,0	1/1:15,19:36:52.90:614,53,0	0/1:10,10:22:14.92:317,0,15	1/1:3,7:10:8.03:214,8,0
chr10	38385080	.	G	GA	6576.29	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=1.204;DP=529;FS=0.000;HRun=6;HaplotypeScore=121.8468;InbreedingCoeff=0.9347;MQ=70.89;MQ0=0;MQRankSum=-4.159;QD=27.52;ReadPosRankSum=-1.012;VQSLOD=3.2031;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,1:27:48.63:278,49,0	0/0:5,0:5:11.79:0,12,78	0/0:21,0:21:9.98:0,10,394	0/0:13,0:13:5.72:0,6,108	0/0:11,0:11:1.58:0,2,112	0/0:25,0:25:63.10:0,63,631	0/0:19,0:19:44.77:0,45,440	1/1:1,26:27:78.18:898,78,0	0/0:21,0:21:43.79:0,44,294	1/1:3,24:27:75.22:903,75,0	1/1:5,9:14:24.03:280,24,0	0/0:24,0:24:54.11:0,54,548	0/0:18,0:18:49.35:0,49,289	0/0:24,0:24:55.45:0,55,352	0/0:21,0:21:21.35:0,21,201	0/0:17,0:16:43.29:0,43,237	0/0:25,0:25:32.09:0,32,312	1/1:4,17:21:46.50:556,46,0	1/1:5,15:20:42.12:502,42,0	1/1:5,22:27:63.19:764,63,0	1/1:0,4:4:9.03:111,9,0	0/0:10,0:10:26.46:0,26,174	0/0:17,0:17:36.07:0,36,367	0/0:18,0:18:45.10:0,45,458	1/1:2,14:16:42.13:517,42,0	1/1:4,21:25:63.20:773,63,0	1/1:6,15:21:53.05:625,53,0	1/1:0,10:10:30.09:369,30,0
chr10	38385115	.	C	CTGTGTGTG	8629.77	PASS	AB=1.000;AC=47;AF=0.839;AN=56;BaseQRankSum=-2.557;DP=626;FS=2.804;HRun=0;HaplotypeScore=244.4310;InbreedingCoeff=0.6727;MQ=55.59;MQ0=7;MQRankSum=-4.839;QD=16.28;ReadPosRankSum=-1.021;VQSLOD=3.6410;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:29:11.50:264,12,0	1/1:9,4:13:3.01:123,3,0	0/0:27,0:20:5.14:0,5,76	0/0:14,0:10:5.23:0,5,71	1/1:13,3:21:2.78:123,3,0	0/0:7,0:29:42.14:0,42,746	0/0:13,0:23:23.59:0,24,446	1/1:41,0:38:28.58:531,29,0	1/1:10,9:22:14.83:557,15,0	1/1:34,0:35:39.12:953,39,0	1/1:18,0:17:2.88:23,3,0	1/1:22,0:21:10.71:231,11,0	1/1:12,5:18:17.99:578,18,0	1/1:24,6:33:8.92:370,9,0	1/1:12,8:25:20.95:649,21,0	1/1:12,3:14:18.05:493,18,0	1/1:25,0:25:21.02:420,21,0	1/1:14,0:15:20.97:416,21,0	1/1:24,0:23:20.27:436,20,0	1/1:21,0:23:14.99:312,15,0	1/1:16,0:16:9.47:115,9,0	1/1:13,6:20:11.58:493,12,0	1/1:20,0:20:8.77:85,9,0	0/1:25,0:25:0:0,0,0	1/1:20,0:22:14.67:402,15,0	1/1:23,0:23:27.09:653,27,0	1/1:14,0:16:12.02:286,12,0	1/1:8,0:8:6.01:114,6,0
chr10	38386166	.	G	GGGGTGT	13900.48	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=15.255;DP=608;FS=7.538;HRun=0;HaplotypeScore=157.2255;InbreedingCoeff=0.9595;MQ=83.31;MQ0=0;MQRankSum=-15.925;QD=91.45;ReadPosRankSum=0.375;VQSLOD=6.1184;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,123,3068	0/0:11,0:11:33.11:0,33,846	0/0:18,0:18:12.17:0,12,667	0/0:24,0:25:0.47:0,0,1094	0/0:25,0:25:75.24:0,75,1787	0/0:26,0:26:78.25:0,78,1908	0/0:23,0:23:66.23:0,66,1683	1/1:0,8:10:30.10:977,30,0	0/0:29,0:29:81.28:0,81,2044	1/1:2,13:15:42.14:1437,42,0	1/1:1,15:16:45.15:1527,45,0	0/0:32,0:32:96.32:0,96,2345	0/0:26,0:26:78.25:0,78,1940	0/0:32,0:32:90.31:0,90,2296	0/0:39,0:39:99:0,114,2824	0/0:27,0:27:81.28:0,81,2014	0/0:29,0:29:87.30:0,87,2225	1/1:1,8:9:24.08:851,24,0	1/1:4,11:15:45.13:1365,45,0	1/1:3,12:17:36.12:1253,36,0	1/1:2,11:13:29.74:936,30,0	0/0:16,0:16:45.15:0,45,1120	0/0:34,0:34:96.33:0,96,2442	0/0:23,0:23:69.24:0,69,1766	1/1:2,13:15:45.12:1406,45,0	1/1:2,16:18:54.19:1804,54,0	1/1:1,15:17:48.14:1603,48,0	1/1:0,7:7:21.07:740,21,0
chr10	38386169	.	A	AC	6788.42	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=18.210;DP=653;FS=2.780;HRun=0;HaplotypeScore=147.5971;InbreedingCoeff=0.9958;MQ=82.28;MQ0=0;MQRankSum=-18.290;QD=34.99;ReadPosRankSum=0.193;VQSLOD=4.2345;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,117,1616	0/0:11,0:11:33.11:0,33,462	0/0:20,0:20:27.22:0,27,424	0/0:24,0:25:33.64:0,34,560	0/0:25,0:25:69.22:0,69,946	0/0:27,0:27:81.27:0,81,1131	0/0:23,0:23:69.23:0,69,964	1/1:12,8:20:47.61:700,48,0	0/0:28,0:28:84.26:0,84,1157	1/1:5,14:19:57.18:785,57,0	1/1:3,15:18:51.14:683,51,0	0/0:30,0:30:87.28:0,87,1199	0/0:27,0:27:78.26:0,78,1090	0/0:32,0:32:93.30:0,93,1284	0/0:39,0:39:99:0,114,1543	0/0:27,0:27:75.24:0,75,1032	0/0:31,0:31:93.27:0,93,1263	1/1:3,9:12:36.12:526,36,0	1/1:5,11:16:26.56:585,27,0	1/1:6,14:20:44.18:582,44,0	1/1:8,11:19:13.43:383,13,0	0/0:16,0:16:48.16:0,48,668	0/0:35,0:35:99:0,105,1465	0/0:24,0:24:72.24:0,72,1004	1/1:5,13:18:42.14:590,42,0	1/1:7,16:23:47.64:841,48,0	1/1:6,16:22:60.17:812,60,0	1/1:0,7:7:21.07:301,21,0
chr10	38387744	.	GTGCACACACTCACACACA	G	1632.47	PASS	AB=0.982;AC=19;AF=0.339;AN=56;BaseQRankSum=7.893;DP=1169;FS=14.973;HRun=0;HaplotypeScore=451.5679;InbreedingCoeff=0.8439;MQ=56.21;MQ0=27;MQRankSum=-7.050;QD=4.19;ReadPosRankSum=-0.046;VQSLOD=-0.1073;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,118,5244	1/1:8,0:8:12.49:265,12,0	0/0:52,0:13:13.28:0,13,219	0/1:54,0:11:6.34:6,0,190	1/1:11,25:36:7.91:114,8,0	0/0:28,0:28:65.03:0,65,2909	0/0:46,0:46:63.20:0,63,2724	0/0:40,0:39:57.17:0,57,1639	1/1:10,33:43:9.03:134,9,0	0/0:44,0:43:88.54:0,89,4068	0/0:18,0:17:38.94:0,39,1840	0/0:46,0:46:99:0,99,5106	1/1:12,35:47:5.71:182,6,0	1/1:11,38:49:27.56:494,28,0	1/1:17,30:47:6.02:116,6,0	1/1:8,30:38:9.03:263,9,0	1/1:8,30:38:8.06:102,8,0	0/0:40,0:39:54.74:0,55,2823	0/0:21,0:19:30.09:0,30,1122	0/0:28,0:27:56.45:0,56,2593	0/0:155,0:155:99:0,279,12236	1/1:11,18:29:10.92:153,11,0	0/0:19,0:19:48.16:0,48,2771	0/0:68,0:68:99:0,131,6532	0/0:34,0:33:50.98:0,51,2092	0/0:39,0:39:69.23:0,69,3204	0/0:26,0:26:51.05:0,51,2363	0/0:19,0:19:51.16:0,51,2642
chr10	38387782	.	GCA	G	11855.40	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=14.132;DP=1103;FS=1.644;HRun=0;HaplotypeScore=158.5269;InbreedingCoeff=0.9894;MQ=57.04;MQ0=14;MQRankSum=-0.066;QD=27.01;ReadPosRankSum=6.696;VQSLOD=5.9278;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,108,1837	0/0:9,0:9:11.45:0,11,204	0/0:46,0:25:66.17:0,66,1068	0/0:54,0:20:51.17:0,51,841	0/0:30,0:30:14.62:0,15,254	0/0:22,0:22:57.18:0,57,942	0/0:42,0:42:99:0,105,1736	1/1:9,32:40:36.33:1027,36,0	0/0:43,0:43:30.10:0,30,510	1/1:8,36:44:99:1404,108,0	1/1:2,17:18:36.07:449,36,0	0/0:38,0:38:96.33:0,96,1621	0/0:48,0:48:35.34:0,35,658	0/0:49,0:49:29.92:0,30,493	0/0:38,0:38:21.07:0,21,357	0/0:37,0:37:16.76:0,17,351	0/0:43,0:43:30.10:0,30,509	1/1:5,34:39:59.06:923,59,0	1/1:9,18:25:54.13:670,54,0	1/1:1,27:27:63.15:819,63,0	1/1:20,114:131:99:3489,271,0	0/0:26,0:26:20.02:0,20,329	0/0:25,0:25:60.21:0,60,1014	0/0:63,0:63:99:0,141,2367	1/1:4,24:27:56.21:708,56,0	1/1:5,28:33:84.26:1078,84,0	1/1:3,18:21:51.06:663,51,0	1/1:1,24:25:48.16:624,48,0
chr10	38389421	.	G	GT	18744.35	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-9.715;DP=698;FS=8.358;HRun=2;HaplotypeScore=83.8460;InbreedingCoeff=0.9986;MQ=89.68;MQ0=0;MQRankSum=-5.604;QD=38.33;ReadPosRankSum=1.464;VQSLOD=5.1024;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:72.21:0,72,879	1/1:0,12:12:36.12:518,36,0	0/0:36,0:36:99:0,102,1247	0/0:20,0:20:54.16:0,54,650	1/1:6,17:23:54.14:750,54,0	0/0:17,0:17:45.14:0,45,558	0/0:29,0:29:84.25:0,84,1029	1/1:2,30:33:89.96:1236,90,0	1/1:6,25:31:84.22:1147,84,0	1/1:2,36:39:99:1526,108,0	1/1:1,21:22:54.18:777,54,0	0/0:33,0:33:99:0,99,1227	1/1:1,15:16:48.16:690,48,0	1/1:1,18:19:54.15:754,54,0	1/1:2,25:27:69.20:970,69,0	1/1:4,15:19:57.16:768,57,0	1/1:4,18:22:60.19:840,60,0	1/1:0,27:27:78.26:1123,78,0	1/1:2,30:32:90.29:1278,90,0	1/1:0,25:25:66.22:950,66,0	1/1:0,22:22:63.21:907,63,0	1/1:5,19:24:60.05:772,60,0	0/0:19,0:19:54.15:0,54,655	0/0:31,0:31:90.24:0,90,1098	1/1:0,22:22:60.20:864,60,0	1/1:0,27:27:81.26:1148,81,0	1/1:1,40:40:99:1467,102,0	1/1:0,6:6:18.06:259,18,0
chr10	38389478	.	C	CA	8565.05	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=15.052;DP=700;FS=0.000;HRun=1;HaplotypeScore=101.5731;InbreedingCoeff=0.9986;MQ=82.94;MQ0=0;MQRankSum=-6.571;QD=40.21;ReadPosRankSum=0.455;VQSLOD=4.7898;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,114,1480	1/1:0,6:6:18.06:270,18,0	0/0:20,0:20:51.16:0,51,655	0/0:24,0:24:51.07:0,51,633	1/1:2,24:26:69.10:952,69,0	0/0:26,0:26:78.24:0,78,998	0/0:33,0:33:93.27:0,93,1176	0/0:20,0:20:60.19:0,60,779	1/1:3,29:32:90.29:1309,90,0	0/0:26,0:26:75.24:0,75,960	0/0:20,0:20:57.18:0,57,738	0/0:32,0:32:96.31:0,96,1247	1/1:2,26:28:72.24:1076,72,0	1/1:3,19:22:60.09:837,60,0	1/1:0,34:34:99:1483,102,0	1/1:0,14:14:39.08:554,39,0	1/1:2,20:22:63.18:919,63,0	0/0:30,0:30:84.23:0,84,1057	0/0:20,0:20:60.17:0,60,753	0/0:20,0:20:57.17:0,57,727	0/0:27,0:27:75.23:0,75,961	1/1:2,27:29:81.22:1166,81,0	0/0:20,0:20:60.19:0,60,778	0/0:42,0:42:99:0,126,1591	0/0:18,0:18:48.14:0,48,608	0/0:33,0:33:99:0,99,1285	0/0:29,0:29:78.25:0,78,1013	0/0:9,0:9:27.09:0,27,351
chr10	38390028	.	TG	T	5423.92	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=13.599;DP=593;FS=6.068;HRun=1;HaplotypeScore=144.7883;InbreedingCoeff=0.9812;MQ=51.49;MQ0=5;MQRankSum=-13.174;QD=31.17;ReadPosRankSum=0.606;VQSLOD=4.2383;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:27:12.27:0,12,410	1/1:3,6:9:24.67:279,25,0	0/0:30,1:9:19.59:0,20,189	0/0:23,0:7:8.16:0,8,125	1/1:8,25:31:79.46:887,79,0	0/0:11,0:11:29.73:0,30,360	0/0:17,0:17:35.84:0,36,532	0/0:32,0:32:92.25:0,92,1183	1/1:7,14:21:59.98:699,60,0	0/0:32,0:31:90.28:0,90,1226	0/0:23,0:23:65.98:0,66,806	0/0:18,0:18:27.66:0,28,179	1/1:4,13:17:44.63:577,45,0	1/1:1,10:11:30.10:411,30,0	1/1:5,14:19:46.56:684,47,0	1/1:4,17:21:60.98:744,61,0	1/1:9,9:17:37.11:388,37,0	0/0:30,0:30:81.14:0,81,1086	0/0:25,0:25:72.02:0,72,840	0/0:24,0:24:71.37:0,71,904	0/0:7,0:7:18.04:0,18,231	1/1:5,20:25:66.16:755,66,0	0/0:20,0:19:36.18:0,36,221	0/0:8,0:8:20.97:0,21,105	0/0:21,0:21:32.81:0,33,510	0/0:27,0:27:77.59:0,78,1014	0/0:26,0:26:71.03:0,71,992	0/0:16,0:16:48.12:0,48,631
chr10	38390038	.	TG	T	1767.04	PASS	AB=0.973;AC=22;AF=0.393;AN=56;BaseQRankSum=15.855;DP=609;FS=3.405;HRun=1;HaplotypeScore=166.7385;InbreedingCoeff=0.7041;MQ=49.44;MQ0=10;MQRankSum=-13.116;QD=6.16;ReadPosRankSum=0.237;VQSLOD=0.5677;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:25,2:27:21.62:133,22,0	1/1:10,0:10:24.38:97,24,0	0/1:29,0:8:10.57:11,0,17	0/1:26,1:7:3.82:4,0,52	1/1:37,0:35:39.70:312,40,0	0/0:12,0:12:26.77:0,27,317	0/0:16,0:16:39.44:0,39,474	0/0:32,0:31:87.67:0,88,1101	1/1:22,1:22:53.26:271,53,0	0/0:32,0:30:90.24:0,90,1098	0/0:24,0:24:66.02:0,66,817	0/0:19,0:19:3.14:0,3,420	1/1:18,0:18:25.74:158,26,0	1/1:13,0:13:9.93:137,10,0	1/1:20,0:20:50.48:217,50,0	1/1:26,0:26:64.57:275,65,0	1/1:19,0:18:28.14:146,28,0	0/0:27,0:27:74.90:0,75,889	0/0:17,0:17:51.17:0,51,655	0/0:28,0:28:77.22:0,77,891	0/0:7,0:7:15.04:0,15,194	0/1:23,2:25:9.38:200,0,9	0/0:23,0:21:41.09:0,41,385	0/1:13,0:13:16.48:16,0,178	0/0:20,0:20:25.43:0,25,442	0/0:25,0:25:67.87:0,68,887	0/0:26,0:25:60.87:0,61,861	0/0:14,0:14:41.97:0,42,513
chr10	38390039	.	GT	G	4844.03	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=14.503;DP=607;FS=0.344;HRun=7;HaplotypeScore=156.8875;InbreedingCoeff=0.9218;MQ=49.44;MQ0=12;MQRankSum=-13.479;QD=19.85;ReadPosRankSum=1.159;VQSLOD=3.0557;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,20:27:27.97:256,28,0	1/1:4,6:10:29.99:279,30,0	0/1:28,0:9:5.38:5,0,19	0/0:27,0:7:5.82:0,6,33	1/1:13,23:34:80.54:759,81,0	0/0:11,0:11:27.06:0,27,324	0/0:16,0:16:44.73:0,45,498	0/0:33,0:32:87.28:0,87,1091	1/1:9,14:22:62.79:577,63,0	0/0:32,0:30:78.24:0,78,969	0/0:24,0:24:66.21:0,66,823	0/0:18,0:18:47.61:0,48,548	1/1:9,9:18:47.98:438,48,0	1/1:5,8:13:32.84:300,33,0	1/1:6,14:20:56.94:543,57,0	1/1:9,17:26:78.02:735,78,0	1/1:8,11:18:52.04:459,52,0	0/0:27,0:27:66.17:0,66,801	0/0:18,0:17:51.16:0,51,641	0/0:28,0:28:81.25:0,81,996	0/0:8,0:7:14.98:0,15,189	1/1:13,11:24:41.71:493,42,0	0/0:23,0:21:38.90:0,39,449	0/0:13,0:13:17.85:0,18,223	0/0:20,0:20:36.10:0,36,441	0/0:25,0:25:66.05:0,66,828	0/0:26,0:25:74.65:0,75,854	0/0:14,0:14:42.10:0,42,510
chr10	38390040	.	T	TTTTTTG	9181.02	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=12.856;DP=623;FS=1.097;HRun=0;HaplotypeScore=204.4829;InbreedingCoeff=0.9384;MQ=49.23;MQ0=16;MQRankSum=-12.737;QD=40.45;ReadPosRankSum=0.040;VQSLOD=4.7916;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:27:6.15:100,6,0	1/1:7,3:10:30.10:673,30,0	0/0:28,0:9:3.01:0,3,39	0/0:27,0:7:5.69:0,6,48	1/1:34,5:36:86.55:1302,87,0	0/0:12,0:12:25.42:0,25,486	0/0:16,0:16:45.09:0,45,755	0/0:34,0:33:88.54:0,89,1359	1/1:22,2:23:64.06:1046,64,0	0/0:32,0:30:81.26:0,81,1284	0/0:24,0:24:66.22:0,66,1126	0/0:18,0:18:47.13:0,47,610	1/1:14,5:19:51.14:962,51,0	1/1:12,3:15:37.30:569,37,0	1/1:19,2:21:57.62:858,58,0	1/1:19,8:27:78.71:1576,79,0	1/1:16,4:18:54.02:958,54,0	0/0:27,0:27:46.60:0,47,1004	0/0:19,0:17:51.17:0,51,747	0/0:28,0:28:81.14:0,81,1190	0/0:9,0:7:13.44:0,13,242	1/1:19,6:25:44.76:1138,45,0	0/0:24,0:22:28.36:0,28,493	0/0:12,0:12:20.86:0,21,295	0/0:21,0:21:36.11:0,36,539	0/0:25,0:25:66.06:0,66,1044	0/0:26,0:25:75.16:0,75,1143	0/0:14,0:14:42.11:0,42,718
chr10	38390054	.	G	GTT	5007.74	PASS	AB=0.970;AC=50;AF=0.893;AN=56;BaseQRankSum=2.171;DP=656;FS=7.836;HRun=20;HaplotypeScore=183.8781;InbreedingCoeff=0.4067;MQ=47.71;MQ0=20;MQRankSum=-2.240;QD=7.84;ReadPosRankSum=2.013;VQSLOD=0.9358;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:32,0:32:16.02:79,16,0	1/1:11,0:11:26.69:182,27,0	0/1:36,0:9:1.31:1,0,31	0/1:24,0:5:0:0,0,0	1/1:39,0:36:69.31:436,69,0	0/1:16,0:16:24.25:49,0,24	0/0:16,0:17:4.86:0,5,77	1/1:35,0:34:13.61:129,14,0	1/1:22,0:21:29.65:205,30,0	1/1:36,0:33:31.06:203,31,0	1/1:25,0:25:42.30:219,42,0	0/1:19,1:20:1:103,0,1	1/1:20,0:20:44.10:302,44,0	1/1:16,0:16:25.38:163,25,0	1/1:25,0:25:37.66:226,38,0	1/1:33,0:33:70.62:467,71,0	1/1:23,0:21:49.39:306,49,0	1/1:25,0:25:46.47:242,46,0	1/1:25,0:22:18.93:119,19,0	1/1:27,0:27:55.47:328,55,0	1/1:10,0:8:6.58:49,7,0	1/1:24,0:24:44.15:293,44,0	1/1:23,1:22:16.23:146,16,0	1/1:5,4:9:3.01:33,3,0	1/1:19,0:19:19.27:118,19,0	1/1:24,0:24:41.88:207,42,0	1/1:24,0:23:52.71:290,53,0	1/1:12,0:12:20.05:112,20,0
chr10	38390058	.	T	TG	5089.51	PASS	AB=0.906;AC=26;AF=0.464;AN=56;BaseQRankSum=-13.536;DP=657;FS=5.425;HRun=0;HaplotypeScore=172.0764;InbreedingCoeff=0.8678;MQ=47.93;MQ0=19;MQRankSum=9.200;QD=16.16;ReadPosRankSum=-1.972;VQSLOD=5.9186;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:47.68:0,48,319	0/0:11,0:11:31.59:0,32,172	0/0:37,0:9:10.77:0,11,116	0/0:27,0:5:5.52:0,6,28	0/0:39,0:36:71.73:0,72,417	0/0:15,0:15:43.89:0,44,354	0/0:16,0:16:40.94:0,41,377	1/1:7,27:33:62.68:561,63,0	0/0:21,0:20:55.08:0,55,323	1/1:23,13:33:70.93:669,71,0	1/1:9,16:25:54.38:452,54,0	0/1:18,1:19:6.46:155,0,6	0/0:23,0:23:53.10:0,53,273	0/0:18,0:18:36.40:0,36,246	0/0:24,0:24:63.69:0,64,388	0/0:35,0:34:86.01:0,86,525	0/0:23,0:22:47.09:0,47,252	1/1:14,13:27:45:497,45,0	1/1:10,14:21:28.28:320,28,0	1/1:5,22:29:54.45:461,54,0	1/1:3,8:9:17.89:141,18,0	0/0:22,0:22:55.98:0,56,309	0/1:21,4:23:1.17:270,0,1	1/1:8,0:8:7.60:42,8,0	1/1:0,17:18:29.98:259,30,0	1/1:2,20:22:61.98:493,62,0	1/1:13,12:24:60.64:523,61,0	1/1:6,6:12:34.63:247,35,0
chr10	38390060	.	T	TG	3170.62	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=10.233;DP=652;FS=5.661;HRun=0;HaplotypeScore=175.9560;InbreedingCoeff=0.9592;MQ=51.06;MQ0=19;MQRankSum=-10.200;QD=14.82;ReadPosRankSum=5.631;VQSLOD=4.9404;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:51.96:0,52,340	1/1:3,8:11:32.48:207,32,0	0/0:37,0:9:6.20:0,6,142	0/0:28,0:7:5.19:0,5,21	1/1:19,20:37:96.84:599,97,0	0/0:15,0:15:44.09:0,44,365	0/0:16,0:16:40.94:0,41,380	0/0:33,0:32:78.09:0,78,455	1/1:10,10:19:52.95:325,53,0	0/0:37,0:34:75.27:0,75,520	0/0:25,0:25:65.25:0,65,418	0/0:19,0:19:49.58:0,50,302	1/1:10,15:25:50.05:303,50,0	1/1:9,9:18:46.40:267,46,0	1/1:13,12:25:58.92:385,59,0	1/1:9,24:32:90.61:579,91,0	1/1:9,14:22:57.03:352,57,0	0/0:25,0:25:68.07:0,68,440	0/0:21,0:18:49.04:0,49,276	0/0:30,0:30:72.56:0,73,459	0/0:11,0:9:18.74:0,19,124	1/1:5,15:20:57.86:367,58,0	0/0:24,0:22:53.31:0,53,347	0/0:9,0:9:11.74:0,12,72	0/0:17,0:17:24.31:0,24,168	0/0:22,0:22:54.27:0,54,374	0/0:25,0:24:52.03:0,52,381	0/0:11,0:11:31.24:0,31,208
chr10	38390062	.	T	TG	1785.56	PASS	AB=0.666;AC=19;AF=0.339;AN=56;BaseQRankSum=-9.580;DP=656;FS=0.000;HRun=0;HaplotypeScore=178.8693;InbreedingCoeff=0.6864;MQ=51.15;MQ0=19;MQRankSum=8.256;QD=6.97;ReadPosRankSum=0.062;VQSLOD=3.4365;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:47.14:0,47,312	0/0:12,0:12:32.89:0,33,205	0/0:36,0:9:20.86:0,21,141	0/0:29,0:7:8.41:0,8,45	0/0:41,0:39:98.60:0,99,589	0/0:17,0:17:50.06:0,50,410	0/0:17,0:17:40.94:0,41,381	1/1:25,7:31:9.81:148,10,0	0/0:20,0:19:52.98:0,53,335	0/1:24,12:34:7.12:234,0,7	0/1:9,16:25:35.37:132,0,35	0/0:16,0:16:17.23:0,17,242	0/0:25,0:25:54.62:0,55,324	0/0:19,0:19:48.99:0,49,305	0/0:25,0:25:64.64:0,65,436	0/0:34,0:33:97.56:0,98,631	0/0:23,0:22:59.03:0,59,359	1/1:13,13:26:52.55:302,53,0	1/1:13,5:15:7.86:125,8,0	1/1:16,12:28:2.54:252,3,0	1/1:5,6:9:5.43:88,5,0	0/0:21,0:21:57.29:0,57,345	0/0:24,0:22:53.47:0,53,357	0/0:10,0:10:12.38:0,12,88	1/1:10,8:18:7.23:89,7,0	1/1:12,13:25:33.74:232,34,0	1/1:12,11:24:40.86:269,41,0	0/1:5,6:11:8.15:108,0,8
chr10	38390066	.	T	TG	2459.81	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=3.987;DP=647;FS=27.688;HRun=0;HaplotypeScore=170.0102;InbreedingCoeff=0.9205;MQ=53.24;MQ0=19;MQRankSum=-6.087;QD=11.23;ReadPosRankSum=7.112;VQSLOD=2.4117;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:45.36:0,45,287	1/1:4,8:12:22.24:169,22,0	0/0:32,0:9:7.83:0,8,142	0/0:29,0:7:10.22:0,10,56	1/1:21,20:39:61.95:522,62,0	0/0:17,0:17:50.06:0,50,409	0/0:16,0:16:39.80:0,40,369	0/0:30,0:29:71.82:0,72,526	1/1:10,10:19:9.36:163,9,0	0/0:37,0:34:97.11:0,97,785	0/0:24,0:24:57.54:0,58,400	0/0:16,0:16:42.13:0,42,293	1/1:3,15:24:24.35:248,24,0	1/1:10,9:19:1.43:212,1,0	1/1:11,12:23:8.15:235,8,0	1/1:10,24:33:64.99:514,65,0	1/1:9,14:22:45.05:314,45,0	0/0:26,0:26:71.25:0,71,542	0/0:17,0:14:40.69:0,41,301	0/0:28,0:28:81.63:0,82,629	0/0:10,0:8:23.85:0,24,184	1/1:8,15:23:32.65:286,33,0	0/0:24,0:22:50.86:0,51,321	0/0:9,0:9:11.87:0,12,81	0/0:19,0:19:31.36:0,31,248	0/0:26,0:26:68.07:0,68,572	0/0:25,0:24:66.48:0,66,465	0/0:11,0:11:32.69:0,33,249
chr10	38390492	.	G	GAAAAAAAAGAAA	4478.27	PASS	AB=1.000;AC=23;AF=0.639;AN=36;BaseQRankSum=5.086;DP=331;FS=1.964;HRun=0;HaplotypeScore=143.4411;InbreedingCoeff=-0.0048;MQ=65.80;MQ0=5;MQRankSum=-5.828;QD=17.84;ReadPosRankSum=-1.284;VQSLOD=3.9671;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:12,6:22:21.07:946,21,0	./.	./.	0/0:30,0:9:3.01:0,3,48	./.	0/0:13,0:13:18.04:0,18,569	0/0:7,0:7:15.05:0,15,417	0/1:25,0:24:11.83:191,0,12	./.	0/1:10,0:10:22.40:149,0,22	0/1:29,0:29:18.73:379,0,19	1/1:10,0:10:9.03:423,9,0	./.	./.	./.	./.	./.	1/1:16,0:16:6.49:122,6,0	0/1:16,0:15:35.34:375,0,35	0/1:25,0:25:12.69:249,0,13	1/1:7,0:7:2.60:10,3,0	./.	1/1:20,0:20:11.51:485,12,0	1/1:8,0:9:3.01:135,3,0	1/1:17,0:17:6.02:176,6,0	0/1:22,0:22:60:471,0,60	0/1:10,0:10:20.21:138,0,20	1/1:12,0:12:9.03:228,9,0
chr10	38390501	.	GA	G	707.27	PASS	AB=0.977;AC=14;AF=0.368;AN=38;BaseQRankSum=-4.306;DP=354;FS=1.460;HRun=11;HaplotypeScore=83.0884;InbreedingCoeff=-0.0484;MQ=55.78;MQ0=12;MQRankSum=3.085;QD=3.68;ReadPosRankSum=-2.135;VQSLOD=0.3048;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:24:38.76:0,39,360	./.	0/0:39,0:11:2.32:0,2,31	0/0:33,2:9:2.34:0,2,30	./.	0/0:10,0:10:30.08:0,30,319	0/1:5,1:6:9.54:10,0,113	1/1:19,2:20:0.84:127,1,0	./.	0/1:15,0:15:15.28:68,0,15	0/1:30,0:30:27.38:103,0,27	0/0:9,0:10:8.52:0,9,42	./.	./.	./.	./.	./.	0/1:17,0:17:1.37:39,0,1	1/1:20,0:19:3.67:206,4,0	0/1:21,0:21:30.13:59,0,30	1/1:0,3:3:3:25,3,0	./.	0/0:15,0:19:5.27:0,5,89	0/0:8,0:8:5.06:0,5,21	0/1:21,0:21:3.39:16,0,3	0/1:21,1:22:21.32:140,0,21	0/1:16,0:16:9.09:37,0,9	0/0:14,0:14:8.10:0,8,33
chr10	38390503	.	A	AAAAAAAAAG	7719	PASS	AB=0.925;AC=28;AF=0.737;AN=38;BaseQRankSum=-4.028;DP=373;FS=1.621;HRun=0;HaplotypeScore=106.8108;InbreedingCoeff=0.3741;MQ=54.07;MQ0=13;MQRankSum=-2.807;QD=24.43;ReadPosRankSum=0.900;VQSLOD=4.1162;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:23:99:307,0,254	./.	0/0:39,0:9:6.26:0,6,41	0/1:39,0:9:11.25:11,0,68	./.	0/0:10,0:10:30.10:0,30,656	0/0:6,0:6:15.05:0,15,383	1/1:19,0:22:37.82:503,38,0	./.	1/1:4,11:16:29.19:535,29,0	1/1:8,20:30:33.03:849,33,0	1/1:1,0:13:8.98:345,9,0	./.	./.	./.	./.	./.	1/1:3,13:19:12:283,12,0	1/1:5,17:24:61.71:1392,62,0	1/1:5,16:22:27.01:569,27,0	1/1:3,0:3:3.01:66,3,0	./.	0/1:19,0:19:13.91:225,0,14	0/1:4,0:7:6.27:110,0,6	1/1:5,15:20:7.78:161,8,0	1/1:4,17:25:60.15:1660,60,0	1/1:4,13:18:12.63:307,13,0	1/1:2,11:13:9.02:396,9,0
chr10	38390601	.	A	AACAC	56.62	PASS	AB=1.000;AC=11;AF=0.275;AN=40;BaseQRankSum=-1.449;DP=431;FS=3.468;HRun=0;HaplotypeScore=99.5426;InbreedingCoeff=0.2709;MQ=56.51;MQ0=21;MQRankSum=0.819;QD=0.51;ReadPosRankSum=-1.197;VQSLOD=1.8137;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:26:0:0,0,0	./.	./.	./.	./.	1/1:7,6:14:2.82:69,3,0	1/1:12,2:16:3.01:70,3,0	0/1:19,0:18:0:0,0,0	0/0:18,0:17:3:0,3,28	./.	0/0:7,0:8:3:0,3,28	1/1:11,0:11:0.46:1,0,0	0/0:13,0:13:3:0,3,28	0/0:22,0:21:2.97:0,3,28	0/1:14,0:14:0:0,0,0	0/0:15,0:15:3:0,3,28	0/0:16,0:16:2.92:0,3,24	0/0:11,0:10:0.85:0,1,1	0/0:18,0:18:2.99:0,3,24	0/0:9,0:9:6.01:0,6,56	0/0:11,0:18:3:0,3,28	./.	./.	0/0:23,0:23:2.50:0,2,25	0/0:17,0:18:3.47:0,3,29	1/1:8,0:8:0.47:1,0,0	0/0:21,0:23:4.73:0,5,54	./.
chr10	38390647	.	CACACACAG	C	1600.98	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=3.106;DP=475;FS=1.716;HRun=0;HaplotypeScore=113.6975;InbreedingCoeff=0.6583;MQ=57.54;MQ0=16;MQRankSum=-1.173;QD=7.93;ReadPosRankSum=2.964;VQSLOD=1.8374;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:18,0:17:8.40:8,0,196	1/1:6,0:6:14.98:124,15,0	0/0:19,0:13:38.96:0,39,377	0/0:22,0:12:24.82:0,25,270	1/1:12,0:11:20.99:215,21,0	0/0:17,0:17:23.99:0,24,328	0/0:27,0:27:50.78:0,51,842	0/0:28,0:28:80.81:0,81,718	1/1:2,15:16:6.02:124,6,0	0/0:11,0:10:18.84:0,19,178	0/0:9,0:9:15.49:0,15,332	0/1:12,0:11:22.80:23,0,123	1/1:14,1:15:21.81:222,22,0	1/1:5,16:21:2.13:85,2,0	1/1:10,0:10:12.02:148,12,0	1/1:1,12:13:6.02:107,6,0	1/1:34,1:35:83.03:676,83,0	0/0:17,0:16:37.37:0,37,412	0/0:11,0:9:20.99:0,21,295	0/0:10,0:9:24.04:0,24,411	0/0:43,0:40:83.88:0,84,813	1/1:0,12:12:2.93:18,3,0	0/0:5,0:5:5.99:0,6,50	0/1:30,0:30:45.64:46,0,322	0/0:12,0:12:21.03:0,21,361	0/0:17,0:17:41.81:0,42,352	0/0:17,0:17:42.01:0,42,505	0/0:8,0:8:14.97:0,15,183
chr10	38390875	.	CGTT	C	574.84	PASS	AB=0.908;AC=8;AF=0.143;AN=56;BaseQRankSum=1.987;DP=744;FS=13.239;HRun=0;HaplotypeScore=236.6997;InbreedingCoeff=-0.1615;MQ=59.80;MQ0=1;MQRankSum=-0.798;QD=2.44;ReadPosRankSum=-8.246;VQSLOD=-0.7276;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:27.69:0,28,849	0/1:12,0:12:38.53:77,0,39	0/0:32,0:30:74.77:0,75,1349	0/0:31,0:31:53.98:0,54,1186	0/1:26,3:29:99:112,0,114	0/0:22,0:22:63.21:0,63,1392	0/0:36,0:36:99:0,108,2313	0/0:21,0:21:34.05:0,34,751	0/1:26,1:27:99:129,0,203	0/0:29,0:29:44.24:0,44,528	0/0:15,0:15:23.77:0,24,176	0/0:22,0:22:47.86:0,48,654	0/1:44,3:47:99:154,0,344	0/1:24,4:27:98.30:98,0,183	0/1:41,4:45:99:112,0,240	0/0:24,13:37:57.16:0,57,316	0/1:14,15:29:20.43:20,0,52	0/0:19,0:19:30.53:0,31,498	0/0:29,0:29:31.11:0,31,621	0/0:16,0:16:17.60:0,18,230	0/0:22,0:22:36.32:0,36,324	0/0:16,10:26:15.72:0,16,92	0/1:19,0:19:4.02:4,0,215	0/0:25,0:25:28.32:0,28,351	0/0:18,0:18:23.62:0,24,218	0/0:34,0:34:51.49:0,51,850	0/0:25,0:25:25.08:0,25,368	0/0:9,0:9:17.09:0,17,251
chr10	38390877	.	T	TCA	5133.62	PASS	AB=0.640;AC=17;AF=0.304;AN=56;BaseQRankSum=13.946;DP=731;FS=35.024;HRun=0;HaplotypeScore=211.8948;InbreedingCoeff=0.8798;MQ=59.02;MQ0=2;MQRankSum=-11.439;QD=18.94;ReadPosRankSum=7.305;VQSLOD=3.1319;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:86.63:0,87,898	1/1:6,6:12:25.39:304,25,0	0/0:30,0:27:74.90:0,75,1222	0/0:33,0:34:85.45:0,85,1329	1/1:15,12:27:33.92:492,34,0	0/0:22,0:22:63.22:0,63,1024	0/0:37,0:37:99:0,111,1782	0/0:20,0:20:57.16:0,57,867	1/1:10,18:28:7.85:544,8,0	0/0:29,0:29:64.09:0,64,851	0/0:14,0:14:23.73:0,24,199	0/0:22,0:22:50.77:0,51,477	0/1:21,26:48:22.26:993,0,22	1/1:10,14:25:9.08:487,9,0	1/1:18,25:43:50.77:867,51,0	1/1:14,23:37:69.22:869,69,0	1/1:17,9:26:15:202,15,0	0/0:19,0:19:42.10:0,42,577	0/0:28,0:28:74.87:0,75,1034	0/0:16,0:16:29.98:0,30,379	0/0:20,0:20:35.92:0,36,459	1/1:11,14:25:29.75:375,30,0	0/0:19,0:19:41.84:0,42,481	0/0:23,0:23:8.49:0,8,244	0/0:18,0:18:26.87:0,27,306	0/0:33,0:33:81.62:0,82,1170	0/0:26,0:26:56.99:0,57,671	0/0:10,0:10:24.07:0,24,327
chr10	38390878	.	T	TCATC	9298.79	PASS	AB=0.622;AC=22;AF=0.393;AN=56;BaseQRankSum=14.500;DP=771;FS=48.494;HRun=0;HaplotypeScore=221.0790;InbreedingCoeff=0.6706;MQ=57.99;MQ0=2;MQRankSum=-12.661;QD=22.85;ReadPosRankSum=7.368;VQSLOD=2.5589;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:18,0:48:99:252,0,503	1/1:6,6:12:26.15:373,26,0	0/0:30,0:27:75.26:0,75,1546	0/0:35,0:35:50.46:0,50,1591	1/1:15,12:27:45.40:646,45,0	0/0:22,0:22:63.20:0,63,1272	0/0:37,0:37:99:0,111,2255	0/0:22,0:22:33.11:0,33,934	1/1:10,18:28:58.04:1051,58,0	0/0:30,0:30:32.49:0,32,835	0/0:13,0:13:3.48:0,3,57	0/1:8,0:31:99:262,0,227	1/1:22,27:49:51.45:1687,51,0	1/1:10,14:25:38.80:842,39,0	1/1:19,25:44:82.94:1552,83,0	1/1:14,23:37:69.24:1463,69,0	1/1:18,9:27:13.27:311,13,0	0/0:19,0:19:42.02:0,42,615	0/0:27,0:27:42.01:0,42,1018	0/0:16,0:16:16.84:0,17,329	0/0:22,0:22:23.53:0,24,373	1/1:11,14:25:30.07:634,30,0	0/1:12,0:21:94.07:94,0,313	0/1:11,0:33:99:132,0,148	0/0:18,0:18:17.76:0,18,231	0/0:33,0:33:73.97:0,74,1233	0/0:27,0:27:25.30:0,25,554	0/0:13,0:13:17.26:0,17,286
chr10	38394212	.	TACAC	T	5335.82	PASS	AB=0.636;AC=47;AF=0.904;AN=52;BaseQRankSum=7.302;DP=662;FS=1.549;HRun=0;HaplotypeScore=152.7770;InbreedingCoeff=0.4423;MQ=52.72;MQ0=27;MQRankSum=-3.067;QD=9.49;ReadPosRankSum=3.493;VQSLOD=4.2960;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:35:11.65:97,12,0	1/1:6,7:12:9.03:137,9,0	./.	./.	1/1:12,18:30:10.72:259,11,0	0/0:23,0:23:27.37:0,27,790	0/0:25,0:26:39.13:0,39,806	1/1:18,0:18:1.24:3,1,0	1/1:15,20:36:1.34:660,1,0	1/1:12,0:24:20.61:178,21,0	1/1:10,0:20:12.01:112,12,0	1/1:7,0:19:9.01:83,9,0	1/1:10,9:19:6.07:248,6,0	1/1:8,10:18:2.20:308,2,0	1/1:12,9:22:18.06:283,18,0	1/1:9,11:19:4.66:258,5,0	1/1:8,21:30:21.61:543,22,0	1/1:8,0:23:20.76:195,21,0	1/1:15,0:17:5.33:55,5,0	1/1:11,0:28:15.02:140,15,0	1/1:15,0:33:2.17:27,2,0	1/1:9,13:22:33.11:496,33,0	1/1:8,0:25:30.03:279,30,0	1/1:8,0:21:4.66:32,5,0	1/1:8,0:25:39.04:362,39,0	1/1:17,0:27:18.02:168,18,0	1/1:6,0:22:42.04:391,42,0	0/1:3,0:7:21.88:22,0,30
chr10	38396188	.	TAC	T	5203.06	PASS	AB=0.863;AC=23;AF=0.411;AN=56;BaseQRankSum=-5.932;DP=740;FS=18.770;HRun=0;HaplotypeScore=174.7566;InbreedingCoeff=0.7200;MQ=59.46;MQ0=15;MQRankSum=3.164;QD=13.91;ReadPosRankSum=5.834;VQSLOD=3.4504;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:30:0:0,0,61	0/0:7,0:8:1.61:0,2,3	0/0:45,0:26:9.28:0,9,152	0/0:39,0:27:14.20:0,14,154	0/0:26,0:30:21.01:0,21,182	0/1:34,3:36:41.97:42,0,861	0/0:21,1:22:4.35:0,4,626	0/1:25,16:37:90.25:439,0,90	0/0:16,0:17:17.49:0,17,161	1/1:20,24:43:17.07:807,17,0	1/1:10,9:18:24.07:280,24,0	0/0:23,0:29:45.04:0,45,334	0/0:14,0:16:11.15:0,11,172	0/0:16,0:22:26:0,26,198	0/0:18,0:19:13.52:0,14,135	0/0:9,0:19:13.45:0,13,50	0/0:15,0:15:3.21:0,3,38	1/1:11,6:16:16.55:207,17,0	1/1:4,5:8:15.04:175,15,0	1/1:18,23:42:28.03:663,28,0	1/1:17,22:40:71.86:815,72,0	0/0:19,0:26:18.85:0,19,125	0/0:12,0:22:31.46:0,31,288	0/0:13,0:25:34.09:0,34,287	1/1:9,16:26:35.91:399,36,0	1/1:19,13:28:23.53:502,24,0	1/1:4,17:22:56.96:629,57,0	1/1:1,7:8:21.06:245,21,0
chr10	38396302	.	TACAC	T	4194.63	PASS	AB=0.744;AC=22;AF=0.393;AN=56;BaseQRankSum=8.762;DP=1173;FS=3.273;HRun=0;HaplotypeScore=289.1896;InbreedingCoeff=0.5391;MQ=39.69;MQ0=114;MQRankSum=-5.470;QD=11.34;ReadPosRankSum=-1.071;VQSLOD=2.8580;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:13,20:30:0.89:423,1,0	0/1:7,7:12:16.78:284,0,17	0/0:74,0:19:54.05:0,54,1175	0/0:52,0:24:56.62:0,57,1136	1/1:15,11:23:27.40:410,27,0	0/0:60,0:60:99:0,101,2756	0/0:48,0:45:26.84:0,27,1697	0/0:81,0:79:98.68:0,99,3780	1/1:10,5:11:11.73:159,12,0	0/0:67,0:75:5.72:0,6,3290	0/0:36,0:34:39.02:0,39,938	1/1:11,14:20:27.06:447,27,0	0/1:12,14:16:3.17:210,0,3	0/1:15,5:16:14.93:193,0,15	0/1:20,15:29:4.76:460,0,5	1/1:14,11:23:36.11:580,36,0	0/1:6,7:11:60.12:60,0,61	0/0:33,0:31:71.73:0,72,1732	0/0:24,0:20:21.91:0,22,900	0/0:51,0:58:65.23:0,65,1406	0/0:93,0:89:99:0,115,3598	1/1:5,19:19:27.07:391,27,0	1/1:6,14:19:20.45:343,20,0	1/1:12,8:15:11.80:175,12,0	0/0:45,0:47:61.22:0,61,1441	0/1:60,0:59:60.39:60,0,2686	0/0:37,0:29:50.96:0,51,1566	0/0:16,0:18:48.96:0,49,1017
chr10	38396316	.	CAT	C	40.80	PASS	AB=0.985;AC=12;AF=0.214;AN=56;BaseQRankSum=7.051;DP=1233;FS=5.394;HRun=0;HaplotypeScore=278.8486;InbreedingCoeff=-0.0421;MQ=38.29;MQ0=141;MQRankSum=-3.376;QD=0.15;ReadPosRankSum=-3.624;VQSLOD=1.4388;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:30:1.52:2,0,60	0/1:14,0:13:19.59:20,0,61	0/0:86,0:20:38.21:0,38,826	0/0:75,0:25:58.24:0,58,831	0/1:28,0:22:2.08:2,0,117	0/0:70,0:65:99:0,106,2188	0/0:51,0:44:78.91:0,79,1438	0/0:97,0:81:99:0,210,3092	1/1:16,0:10:7.54:56,8,0	0/0:87,0:76:99:0,125,2441	0/0:41,0:33:47.15:0,47,737	0/1:27,0:18:21.42:28,0,21	0/0:28,0:16:17.30:0,17,199	0/0:19,0:12:19.73:0,20,110	0/1:37,2:29:5.69:6,0,115	0/1:18,1:17:30.85:31,0,32	0/0:14,0:11:9.37:0,9,78	0/0:32,0:30:58.34:0,58,1230	0/0:25,0:17:1.29:0,1,594	0/0:71,0:55:4.40:0,4,933	0/0:103,0:88:99:0,152,2915	0/1:25,0:20:7.70:8,0,95	0/1:23,0:21:0.15:0,0,144	0/1:21,0:16:6.40:6,0,98	0/0:53,1:42:71.11:0,71,1239	0/0:79,0:61:41.12:0,41,1994	0/0:36,0:29:74.38:0,74,1250	0/1:19,1:17:14.01:14,0,623
chr10	38396333	.	C	CTA	1631.38	PASS	AB=0.999;AC=18;AF=0.321;AN=56;BaseQRankSum=10.771;DP=1134;FS=71.548;HRun=0;HaplotypeScore=233.8046;InbreedingCoeff=-0.2803;MQ=35.96;MQ0=224;MQRankSum=-7.848;QD=2.58;ReadPosRankSum=-0.287;VQSLOD=-0.0479;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:32,0:29:35.78:343,36,0	0/1:10,0:9:32.11:78,0,32	0/1:83,0:11:44.28:44,0,106	0/0:81,0:12:20.79:0,21,185	0/1:23,0:16:10.31:10,0,218	0/0:73,1:67:66.79:0,67,2010	0/1:56,0:43:46.69:47,0,594	0/1:84,0:60:99:145,0,1201	0/1:16,0:11:48.82:49,0,134	0/1:74,0:59:99:156,0,1383	0/0:39,1:30:39.09:0,39,527	0/1:24,0:13:66.80:138,0,67	0/1:25,0:13:66.87:67,0,218	0/1:20,0:11:5.66:6,0,225	0/1:33,0:23:99:163,0,168	0/1:18,0:14:82.37:194,0,82	0/1:13,0:8:6.07:84,0,6	0/0:24,0:22:25.60:0,26,794	0/0:16,0:11:14.06:0,14,295	0/0:64,1:49:53.24:0,53,641	0/0:87,1:73:99:0,114,1799	0/1:26,0:19:60.91:61,0,170	0/1:23,0:20:44.48:44,0,161	0/0:22,0:16:13.57:0,14,160	0/0:44,2:37:11.11:0,11,731	0/1:71,1:51:99:168,0,1222	0/0:31,0:25:68.83:0,69,874	0/0:15,0:12:29.91:0,30,344
chr10	38396334	.	T	TAC	2120.72	PASS	AB=0.769;AC=18;AF=0.321;AN=56;BaseQRankSum=10.322;DP=1134;FS=27.645;HRun=0;HaplotypeScore=232.7227;InbreedingCoeff=-0.1950;MQ=35.70;MQ0=232;MQRankSum=-8.276;QD=4.61;ReadPosRankSum=-0.767;VQSLOD=1.4838;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:18,14:28:36.12:565,36,0	0/1:4,6:9:25.83:134,0,26	0/1:82,0:11:11.63:12,0,29	0/0:83,0:9:4.71:0,5,70	0/1:13,10:16:31.28:31,0,153	0/0:74,0:67:99:0,119,1662	0/0:55,0:42:4.25:0,4,448	0/0:74,0:56:29.14:0,29,821	0/1:11,5:11:99:112,0,125	0/0:71,0:58:3.17:0,3,1013	0/0:40,0:30:33.10:0,33,407	0/1:10,14:13:54.54:227,0,55	0/1:16,9:13:99:124,0,165	0/1:18,5:11:28.52:29,0,173	0/1:18,14:22:99:264,0,143	0/1:9,9:14:48.51:321,0,49	1/1:9,5:9:7.32:181,7,0	0/0:23,0:23:40.82:0,41,667	0/1:15,0:11:19.64:20,0,147	0/0:64,0:49:42.08:0,42,515	0/0:77,0:72:99:0,114,1415	0/1:15,12:20:99:115,0,130	0/1:9,14:20:84.29:84,0,99	0/1:18,5:17:8.06:8,0,102	0/0:45,0:36:41.79:0,42,586	0/1:64,0:49:61.54:62,0,925	0/0:31,0:25:58.73:0,59,695	0/0:15,0:12:20.09:0,20,231
chr10	38396400	.	T	TAC	971.62	PASS	AB=0.936;AC=21;AF=0.438;AN=48;BaseQRankSum=7.628;DP=719;FS=9.358;HRun=0;HaplotypeScore=104.0243;InbreedingCoeff=0.1203;MQ=28.82;MQ0=222;MQRankSum=-1.400;QD=2.94;ReadPosRankSum=3.861;VQSLOD=1.3418;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:28:69.10:0,69,816	./.	0/0:74,0:32:77.43:0,77,962	0/0:80,0:35:92.46:0,92,1117	1/1:13,0:6:2.69:8,3,0	0/0:46,1:35:36.61:0,37,1019	0/0:31,0:24:37.01:0,37,668	0/1:21,6:9:24.61:249,0,25	1/1:21,0:10:0.89:2,1,0	0/1:14,8:12:21.90:308,0,22	./.	1/1:36,0:19:1.88:6,2,0	./.	0/0:16,0:3:3.01:0,3,42	0/1:23,0:15:0.24:12,0,0	0/1:18,0:11:0:0,0,0	./.	0/1:19,0:12:12.83:13,0,96	0/1:13,0:6:31.62:32,0,93	1/1:14,1:6:5.75:63,6,0	0/1:35,3:17:8.93:9,0,54	0/0:16,0:8:3.01:0,3,42	0/0:24,0:20:2.33:0,2,51	0/1:41,0:31:5.24:5,0,137	0/0:13,0:3:2.99:0,3,23	0/1:15,1:4:73.14:79,0,73	1/1:6,5:8:6.02:107,6,0	1/1:12,4:7:12.04:219,12,0
chr10	38396404	.	T	TAC	1706.66	PASS	AB=0.720;AC=29;AF=0.604;AN=48;BaseQRankSum=6.706;DP=700;FS=12.681;HRun=0;HaplotypeScore=91.3344;InbreedingCoeff=0.3709;MQ=27.70;MQ0=208;MQRankSum=3.403;QD=4.90;ReadPosRankSum=4.527;VQSLOD=1.4675;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:27:29.53:141,30,0	./.	0/0:75,0:32:75.08:0,75,867	0/0:85,0:35:84.02:0,84,977	1/1:4,8:5:6.02:102,6,0	0/0:41,4:31:34.88:0,35,929	0/0:22,7:23:49.04:0,49,620	1/1:33,0:17:24.91:231,25,0	1/1:6,13:8:3.01:51,3,0	0/1:17,3:10:17.03:91,0,17	1/1:9,7:5:2.59:10,3,0	1/1:9,12:18:24.01:214,24,0	./.	0/0:7,8:3:2.96:0,3,19	1/1:7,13:13:6.01:78,6,0	0/1:5,14:11:0:0,0,0	./.	0/1:9,8:9:42.86:162,0,43	1/1:9,3:6:6.88:75,7,0	1/1:13,3:7:6.02:89,6,0	0/0:26,10:15:2.52:0,3,14	0/0:4,10:6:3.01:0,3,39	1/1:9,5:17:3.38:192,3,0	0/1:15,10:28:18.08:276,0,18	./.	0/1:14,3:8:26.92:35,0,27	1/1:11,1:8:5.97:50,6,0	1/1:11,5:7:11.80:74,12,0
chr10	38396430	.	TAC	T	1248.42	PASS	AB=0.780;AC=8;AF=0.143;AN=56;BaseQRankSum=4.205;DP=1042;FS=45.618;HRun=0;HaplotypeScore=158.3023;InbreedingCoeff=-0.1989;MQ=31.59;MQ0=304;MQRankSum=-3.290;QD=4.47;ReadPosRankSum=0.970;VQSLOD=1.5089;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:34:54.04:0,54,1018	0/0:8,0:11:8.85:0,9,97	0/0:65,0:16:3.01:0,3,51	0/0:103,0:21:20.20:0,20,201	0/0:20,0:20:26.51:0,27,330	0/0:61,0:48:99:0,114,1869	0/0:41,0:22:40.92:0,41,648	0/0:45,5:27:12.79:0,13,1068	0/0:24,0:12:8.78:0,9,142	0/1:33,19:30:99:488,0,501	0/1:19,6:14:75.79:97,0,76	0/0:34,0:22:43.76:0,44,541	0/0:29,0:20:31.65:0,32,328	0/0:20,0:13:9.40:0,9,92	0/0:27,0:22:13.54:0,14,127	0/0:33,0:25:9.38:0,9,82	0/0:13,0:4:2.04:0,2,58	0/1:19,4:14:13.29:13,0,306	0/1:20,5:13:38.07:38,0,503	0/0:28,4:25:23.69:0,24,367	0/1:55,12:41:80.25:80,0,893	0/0:22,0:16:11.98:0,12,128	0/0:24,0:20:27.08:0,27,431	0/0:42,0:34:57.14:0,57,851	0/0:25,1:15:21.04:0,21,349	0/1:25,15:18:99:296,0,310	0/1:17,9:19:99:106,0,261	0/1:12,9:15:99:263,0,309
chr10	38396500	.	T	TAC	6770.95	PASS	AB=0.748;AC=13;AF=0.232;AN=56;BaseQRankSum=4.017;DP=1790;FS=1.716;HRun=0;HaplotypeScore=355.6828;InbreedingCoeff=-0.3001;MQ=41.04;MQ0=198;MQRankSum=3.199;QD=11.86;ReadPosRankSum=5.172;VQSLOD=4.0151;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:25,6:26:74.90:315,0,75	0/1:14,6:17:99:217,0,162	0/0:80,0:27:59.70:0,60,753	0/0:70,0:31:87.19:0,87,1035	0/1:26,32:55:99:615,0,469	0/0:87,0:70:99:0,123,1753	0/0:55,0:46:99:0,102,1264	0/0:145,0:127:99:0,301,4109	0/1:30,15:34:99:674,0,339	0/0:125,0:101:99:0,220,3155	0/0:62,0:48:63.20:0,63,798	0/1:19,2:16:10.98:11,0,400	0/1:42,29:55:99:1233,0,315	0/1:31,18:41:99:622,0,319	0/1:30,29:51:99:1116,0,315	0/1:18,31:42:99:690,0,140	0/1:21,14:27:99:447,0,220	0/0:42,0:36:38.89:0,39,729	0/0:51,0:38:90.28:0,90,1128	0/0:98,0:84:63.31:0,63,1440	0/0:144,0:119:99:0,226,2742	0/1:29,38:58:99:606,0,519	0/1:26,5:29:99:112,0,316	0/1:26,4:22:99:114,0,295	0/0:74,0:58:90.01:0,90,1318	0/0:105,0:74:99:0,172,2294	0/0:46,0:38:78.23:0,78,968	0/0:35,0:28:66.17:0,66,804
chr10	38396538	.	CAT	C	1176.81	PASS	AB=0.846;AC=16;AF=0.286;AN=56;BaseQRankSum=3.746;DP=1171;FS=49.819;HRun=0;HaplotypeScore=248.9237;InbreedingCoeff=-0.3980;MQ=43.60;MQ0=89;MQRankSum=0.993;QD=1.91;ReadPosRankSum=-6.310;VQSLOD=-0.5578;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,1:19:8.81:0,9,253	0/1:10,2:9:57.60:58,0,190	0/0:41,0:18:47.42:0,47,770	0/0:59,0:29:57.22:0,57,1215	0/1:35,2:36:99:133,0,359	0/1:42,10:42:63.08:63,0,1270	0/0:35,3:35:14.22:0,14,1223	0/0:83,2:76:39.60:0,40,2772	0/0:22,3:19:1.30:0,1,368	0/1:61,10:57:96.92:97,0,2282	0/1:41,5:38:30.56:31,0,867	0/1:4,11:11:43.90:165,0,44	0/1:33,4:30:34.52:35,0,554	0/1:28,3:27:6.84:7,0,470	0/1:33,1:30:20.91:21,0,537	0/0:21,1:21:38.83:0,39,342	0/0:26,3:24:25.02:0,25,369	0/0:27,3:27:56.85:0,57,872	0/1:31,2:26:70.33:70,0,761	0/0:53,9:55:21.14:0,21,1241	0/0:94,6:89:99:0,144,2871	0/1:36,3:36:99:156,0,395	0/1:20,9:27:83.43:83,0,332	0/1:7,10:11:36.61:216,0,37	0/1:48,12:47:0.43:0,0,1288	0/1:64,14:61:99:114,0,1945	0/0:34,3:34:19.49:0,19,1255	0/1:19,6:19:80.41:80,0,532
chr10	38396596	.	TAC	T	2087.85	PASS	AB=0.886;AC=28;AF=0.500;AN=56;BaseQRankSum=11.801;DP=868;FS=19.994;HRun=0;HaplotypeScore=195.1192;InbreedingCoeff=-0.2023;MQ=38.66;MQ0=122;MQRankSum=4.960;QD=3.36;ReadPosRankSum=1.289;VQSLOD=1.3194;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:23:24.21:24,0,256	1/1:6,0:5:10.48:57,10,0	0/0:57,0:2:6.02:0,6,108	0/0:49,0:6:18.04:0,18,224	1/1:11,0:11:12.74:85,13,0	0/1:23,16:38:99:407,0,816	0/1:26,3:22:35.26:35,0,527	0/0:72,0:49:99:0,123,2109	0/1:29,0:27:21.82:139,0,22	0/1:39,3:35:13.26:13,0,1458	0/1:18,6:22:56.99:57,0,357	0/0:14,0:9:9.30:0,9,137	1/1:23,0:22:12:147,12,0	0/1:17,0:16:32.61:95,0,33	0/1:29,1:26:2.51:94,0,3	1/1:22,0:22:21.53:137,22,0	1/1:14,1:11:2.84:14,3,0	0/1:14,7:19:99:138,0,499	0/1:26,2:20:24.06:24,0,878	0/0:38,4:40:13.84:0,14,1222	0/1:67,23:78:99:329,0,1527	1/1:13,0:11:2.77:51,3,0	0/1:12,0:10:28.29:28,0,46	0/0:13,0:11:18.03:0,18,288	0/1:41,8:46:26.41:26,0,718	0/1:38,9:38:99:191,0,1323	0/1:31,4:34:77.11:77,0,1211	0/1:8,3:11:91.24:91,0,233
chr10	38396604	.	CCT	C	3091.96	PASS	AB=0.970;AC=30;AF=0.536;AN=56;BaseQRankSum=12.771;DP=842;FS=0.000;HRun=0;HaplotypeScore=193.4020;InbreedingCoeff=-0.2232;MQ=38.38;MQ0=88;MQRankSum=2.752;QD=5.01;ReadPosRankSum=3.246;VQSLOD=2.7190;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:21:2.46:63,0,2	1/1:5,0:4:8.88:63,9,0	0/0:47,1:3:6.02:0,6,84	0/0:45,0:7:21.05:0,21,326	1/1:9,1:10:11.80:78,12,0	0/1:43,1:42:99:426,0,950	0/1:28,1:21:65.70:66,0,541	0/0:75,4:59:12.71:0,13,2556	0/1:24,2:24:14.85:212,0,15	0/1:39,1:33:53.78:54,0,1290	0/1:22,1:21:53.99:54,0,397	0/1:12,1:9:24.74:25,0,52	1/1:20,0:19:32.86:263,33,0	0/1:18,1:18:14.20:216,0,14	1/1:27,2:25:26.27:194,26,0	1/1:18,0:18:26.40:184,26,0	1/1:14,0:11:1.21:15,1,0	0/1:19,1:18:99:137,0,510	0/1:27,0:22:21.43:21,0,939	0/0:38,2:39:26.54:0,27,1161	0/1:88,3:80:99:423,0,1447	1/1:9,2:9:4.17:38,4,0	0/1:7,0:5:13.24:13,0,44	0/0:12,0:10:2.25:0,2,205	0/1:52,2:51:99:149,0,732	0/1:48,3:43:99:366,0,1188	0/1:31,0:30:97.63:98,0,1205	0/1:12,0:12:99:103,0,340
chr10	38396614	.	C	CACACACACAT	3012.22	PASS	AB=0.967;AC=29;AF=0.518;AN=56;BaseQRankSum=1.880;DP=917;FS=3.969;HRun=0;HaplotypeScore=312.1395;InbreedingCoeff=-0.2702;MQ=38.86;MQ0=85;MQRankSum=5.461;QD=4.11;ReadPosRankSum=-4.745;VQSLOD=1.4060;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:21:7.17:39,7,0	1/1:5,0:5:6.46:93,6,0	0/0:43,0:3:9.03:0,9,204	0/0:47,0:7:21:0,21,361	1/1:13,0:13:10.83:126,11,0	0/1:49,0:46:64.08:64,0,1362	0/1:32,0:25:99:124,0,824	0/1:76,0:59:44.64:45,0,3097	0/1:28,0:28:3.89:294,0,4	0/1:52,1:42:99:336,0,1644	0/0:29,0:27:7.93:0,8,510	1/1:12,0:8:2.26:39,2,0	0/1:23,0:24:45.20:202,0,45	1/1:21,0:23:7.45:342,7,0	0/1:31,0:28:60.13:203,0,60	0/1:20,0:20:29.90:131,0,30	0/1:14,0:11:0.97:20,0,1	0/1:18,0:17:36.47:36,0,729	0/1:29,0:21:38.63:39,0,866	0/0:44,2:44:1.03:0,1,1512	0/1:94,0:82:99:263,0,1527	0/1:13,0:12:13.34:133,0,13	1/1:5,0:3:1.25:3,1,0	0/1:10,0:10:3.91:4,0,4	0/1:49,8:54:99:202,0,886	0/1:54,2:47:99:384,0,1621	0/1:34,0:33:47.44:47,0,1403	0/0:16,0:16:36:0,36,641
chr10	38396642	.	CCCCT	C	124.08	PASS	AB=0.927;AC=5;AF=0.093;AN=54;BaseQRankSum=6.050;DP=1095;FS=35.399;HRun=0;HaplotypeScore=311.1272;InbreedingCoeff=0.1619;MQ=39.51;MQ0=69;MQRankSum=-4.190;QD=0.68;ReadPosRankSum=-0.938;VQSLOD=1.3703;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,1:32:63.15:0,63,1600	0/0:7,0:7:18.06:0,18,514	0/0:51,0:12:33.11:0,33,642	0/0:57,0:15:27.88:0,28,660	0/0:24,0:23:39.13:0,39,1037	0/0:64,1:62:99:0,131,3780	0/1:22,3:23:14.92:15,0,1094	0/0:94,0:75:99:0,220,6045	0/0:31,0:31:23.89:0,24,1413	0/1:66,7:60:99:163,0,3633	0/0:33,0:32:48.13:0,48,1087	1/1:7,0:5:2.91:45,3,0	0/0:29,0:28:65.72:0,66,1760	0/0:29,0:29:66.02:0,66,1782	0/0:36,0:34:63.16:0,63,1699	0/0:23,0:23:54.66:0,55,1440	0/0:20,0:20:45.15:0,45,1151	0/0:21,0:20:60.13:0,60,1515	0/0:42,1:27:1.28:0,1,1593	0/0:67,2:64:99:0,102,2655	0/0:99,0:88:99:0,152,4068	0/0:23,0:23:56.55:0,57,1418	0/0:1,0:1:3:0,3,25	./.	0/1:74,2:72:4.05:4,0,2749	0/0:63,2:52:35.65:0,36,3567	0/0:30,3:32:24.85:0,25,1953	0/0:16,2:18:4.49:0,4,1161
chr10	38396680	.	CACACACAT	C	615.34	PASS	AB=0.965;AC=5;AF=0.096;AN=52;BaseQRankSum=8.061;DP=1157;FS=53.880;HRun=0;HaplotypeScore=356.9436;InbreedingCoeff=0.1763;MQ=40.77;MQ0=59;MQRankSum=-7.651;QD=2.69;ReadPosRankSum=-1.638;VQSLOD=0.5313;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:27:69.24:0,69,2850	0/0:8,0:8:17.78:0,18,781	0/0:43,0:14:33.08:0,33,604	0/0:58,0:18:42.02:0,42,917	0/0:24,0:24:45.15:0,45,1776	0/0:55,0:53:29.62:0,30,3863	0/0:30,0:28:23.72:0,24,2100	0/0:97,3:81:99:0,190,6398	0/0:27,0:21:29.46:0,29,1531	0/0:80,2:68:71.83:0,72,5754	0/0:37,3:33:37.23:0,37,1817	1/1:6,0:6:2.84:18,3,0	0/0:30,0:25:51.18:0,51,2036	0/0:24,0:23:48.06:0,48,1524	0/0:36,0:33:44.72:0,45,1954	0/0:25,0:22:53.41:0,53,2040	0/0:29,0:26:50.74:0,51,2712	0/0:22,0:18:48.15:0,48,1885	0/0:49,0:38:99:0,102,3218	0/1:74,1:65:99:145,0,3068	0/0:102,0:84:99:0,165,6291	0/0:31,0:28:59.85:0,60,2479	./.	./.	0/1:78,2:75:99:365,0,3002	0/1:63,5:57:99:197,0,4558	0/0:43,0:42:72.20:0,72,3409	0/0:27,0:26:1.59:0,2,1726
chr10	38396682	.	C	CCT	160.41	PASS	AB=0.912;AC=5;AF=0.096;AN=52;BaseQRankSum=8.832;DP=1160;FS=51.103;HRun=0;HaplotypeScore=273.8476;InbreedingCoeff=0.3101;MQ=40.72;MQ0=64;MQRankSum=-7.253;QD=0.79;ReadPosRankSum=-4.790;VQSLOD=0.3149;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:28:69.19:0,69,1125	0/0:8,0:8:18.06:0,18,294	0/0:41,0:13:39.13:0,39,621	0/0:58,0:17:45.02:0,45,733	0/0:22,0:22:45.09:0,45,734	0/0:55,0:53:51.78:0,52,1483	0/0:30,0:28:71.74:0,72,1121	0/0:103,0:83:70.52:0,71,3164	0/0:26,0:21:47.52:0,48,728	0/0:81,1:69:99:0,157,2738	0/1:39,4:34:2.95:3,0,660	1/1:4,0:8:5.86:57,6,0	0/0:29,0:25:51.17:0,51,831	0/0:23,0:23:54.14:0,54,856	0/0:34,0:33:63.02:0,63,990	0/0:24,0:22:54.18:0,54,880	0/0:27,0:26:68.82:0,69,1068	0/0:23,0:19:51.62:0,52,804	0/0:49,0:38:99:0,103,1595	0/1:67,6:62:4.43:4,0,1254	0/0:101,0:82:99:0,172,2754	0/0:31,0:27:60.12:0,60,979	./.	./.	0/1:69,9:73:99:196,0,1272	0/0:68,1:58:99:0,126,2219	0/0:44,0:43:55.40:0,55,1304	0/0:24,1:24:8.92:0,9,734
chr10	38396716	.	CAA	C	2568.18	PASS	AB=0.811;AC=9;AF=0.173;AN=52;BaseQRankSum=3.335;DP=1201;FS=110.161;HRun=3;HaplotypeScore=228.5129;InbreedingCoeff=-0.2125;MQ=40.07;MQ0=194;MQRankSum=-1.082;QD=4.66;ReadPosRankSum=3.066;VQSLOD=-0.0432;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:33:89.89:0,90,1381	0/0:11,0:11:27.06:0,27,458	./.	./.	0/0:24,0:19:42.77:0,43,748	0/0:61,0:57:99:0,149,2382	0/0:28,0:24:66.07:0,66,1046	0/1:48,36:49:99:937,0,874	0/0:27,0:20:57.11:0,57,1010	0/1:68,17:68:99:473,0,2248	0/1:30,10:31:75.13:75,0,705	0/0:15,0:13:30.02:0,30,502	0/0:37,0:28:69.16:0,69,1230	0/0:16,0:15:32.97:0,33,467	0/0:34,0:29:77.95:0,78,1149	0/0:34,0:31:75.11:0,75,1287	0/0:37,0:33:90.09:0,90,1526	0/1:33,4:33:43.58:44,0,1367	0/1:36,10:30:99:313,0,774	0/1:49,11:53:91.33:91,0,1031	0/1:72,30:80:99:157,0,2128	0/0:38,0:30:73.93:0,74,1218	0/0:16,0:16:30.03:0,30,448	0/0:12,0:9:15.01:0,15,239	0/0:53,10:57:10.62:0,11,2118	0/1:47,13:48:99:371,0,1552	0/1:28,9:36:99:245,0,975	0/0:26,1:27:59.08:0,59,1237
chr10	38396757	.	CTA	C	2076.05	PASS	AB=0.982;AC=13;AF=0.232;AN=56;BaseQRankSum=5.734;DP=1042;FS=13.507;HRun=0;HaplotypeScore=229.5434;InbreedingCoeff=0.4959;MQ=41.89;MQ0=103;MQRankSum=3.181;QD=8.37;ReadPosRankSum=4.919;VQSLOD=1.9213;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:23:34.83:0,35,141	1/1:11,0:11:25.70:170,26,0	0/0:48,0:5:11.97:0,12,179	0/0:43,0:3:8.94:0,9,123	0/1:23,0:19:9.27:143,0,9	0/0:54,0:50:99:0,114,2050	0/0:17,0:15:28.87:0,29,611	0/0:62,0:52:99:0,146,2342	0/1:28,1:22:17.85:245,0,18	0/0:65,0:53:99:0,140,2106	0/0:31,0:25:41.87:0,42,689	0/0:18,0:15:20.56:0,21,108	1/1:37,0:28:43.81:388,44,0	1/1:18,0:17:18.57:239,19,0	1/1:32,2:30:43.77:367,44,0	0/1:30,2:30:26.63:296,0,27	0/1:30,0:26:31.17:261,0,31	0/0:34,0:30:80.80:0,81,1511	0/0:36,0:26:53.73:0,54,1262	0/0:47,0:43:41.37:0,41,757	0/0:82,0:66:96.28:0,96,1774	0/1:34,0:29:65.07:144,0,65	0/0:24,0:24:39.23:0,39,147	0/0:20,0:18:12.99:0,13,42	0/0:52,0:48:99:0,108,1731	0/0:60,0:47:99:0,123,2228	0/0:41,0:40:66.52:0,67,1387	0/0:26,0:26:69.52:0,70,1196
chr10	38396758	.	TAC	T	6253.77	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=4.428;DP=1047;FS=0.658;HRun=0;HaplotypeScore=218.4225;InbreedingCoeff=0.9755;MQ=41.80;MQ0=107;MQRankSum=5.091;QD=18.18;ReadPosRankSum=5.622;VQSLOD=4.6238;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:25:35.44:179,35,0	1/1:1,9:11:27.08:334,27,0	0/0:49,0:5:9.03:0,9,134	0/0:46,0:3:6.02:0,6,84	1/1:7,16:19:36.01:446,36,0	0/0:53,0:50:99:0,116,1678	0/0:18,0:17:24.69:0,25,521	0/0:62,0:51:99:0,111,1725	1/1:11,18:22:51.16:632,51,0	0/0:64,1:52:93.55:0,94,1797	0/0:31,0:25:29.88:0,30,488	1/1:4,0:15:23.67:114,24,0	1/1:13,24:28:69:855,69,0	1/1:3,15:17:42.13:520,42,0	1/1:13,21:30:70.73:839,71,0	1/1:9,22:29:63.17:759,63,0	1/1:10,20:26:37.44:649,37,0	0/0:33,0:30:78.19:0,78,1186	0/0:36,0:26:61.12:0,61,938	0/0:47,0:44:38.79:0,39,611	0/0:78,0:65:80.13:0,80,1322	1/1:12,22:29:48.04:595,48,0	1/1:2,0:24:48.29:238,48,0	1/1:8,0:18:17.11:94,17,0	0/0:55,0:51:99:0,102,1504	0/0:59,0:47:99:0,111,1764	0/0:41,0:40:66.86:0,67,1011	0/0:25,0:25:67.68:0,68,999
chr10	38396818	.	C	CACAT	3002.65	PASS	AB=0.957;AC=12;AF=0.214;AN=56;BaseQRankSum=3.366;DP=904;FS=7.356;HRun=0;HaplotypeScore=323.0179;InbreedingCoeff=-0.0315;MQ=48.06;MQ0=18;MQRankSum=-3.682;QD=7.05;ReadPosRankSum=-1.975;VQSLOD=1.1344;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:32:39.59:0,40,708	0/0:12,0:12:22.21:0,22,347	0/0:50,0:16:37.95:0,38,514	0/0:69,0:45:63.94:0,64,1248	0/0:25,0:24:30.08:0,30,552	0/0:40,0:40:44.43:0,44,1712	0/0:20,0:21:23:0,23,823	0/1:59,0:49:99:111,0,1117	0/0:17,0:16:35.58:0,36,563	0/1:44,2:40:99:521,0,523	1/1:26,0:23:6.78:75,7,0	0/0:19,0:17:38.14:0,38,595	0/0:24,0:22:48.83:0,49,838	0/0:18,0:16:19.17:0,19,543	0/0:37,0:35:55.99:0,56,892	0/0:19,0:18:39.40:0,39,657	0/0:20,0:19:45.10:0,45,777	0/1:20,1:19:99:129,0,337	0/1:41,0:35:99:208,0,625	0/1:37,3:38:88.64:89,0,99	0/1:55,0:48:99:118,0,115	0/0:30,0:28:46.99:0,47,959	0/0:22,0:21:36.49:0,36,654	0/0:20,0:19:25.75:0,26,402	0/1:22,3:23:53.20:242,0,53	0/1:59,2:57:99:746,0,416	0/1:34,1:33:99:427,0,141	0/1:15,2:17:2.62:490,0,3
chr10	38396842	.	AACAAAC	A	5551.84	PASS	AB=1.000;AC=25;AF=0.446;AN=56;BaseQRankSum=1.591;DP=790;FS=3.997;HRun=0;HaplotypeScore=275.8701;InbreedingCoeff=-0.6568;MQ=48.83;MQ0=15;MQRankSum=-3.883;QD=8.90;ReadPosRankSum=-2.049;VQSLOD=3.4596;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:25,11:34:59.08:817,59,0	0/1:8,0:8:25.68:26,0,109	0/0:51,0:15:17.03:0,17,345	0/0:63,0:38:46.04:0,46,804	0/1:26,0:25:86.41:86,0,247	0/0:28,0:28:42.93:0,43,1437	0/0:22,0:22:58.32:0,58,1434	0/1:36,0:36:99:277,0,490	0/1:23,0:20:83.96:84,0,181	0/1:32,0:29:99:638,0,103	0/1:25,0:22:14.50:193,0,14	0/1:22,0:22:43.85:44,0,485	0/1:25,0:23:99:109,0,189	0/1:16,0:14:31.29:31,0,124	0/1:36,0:34:99:172,0,248	0/1:19,0:18:63.34:63,0,407	0/1:20,0:19:99:107,0,148	0/1:19,0:17:99:208,0,121	0/1:25,0:21:84.79:447,0,85	0/1:28,0:27:99:270,0,123	0/1:36,0:31:99:103,0,108	0/1:28,0:26:58.54:59,0,225	0/1:26,0:25:60.38:60,0,340	0/1:19,0:18:13.69:14,0,246	0/1:23,0:22:66.72:223,0,67	0/1:49,0:45:99:983,0,132	0/1:28,0:25:99:236,0,108	0/1:15,0:15:20.72:301,0,21
chr10	38396846	.	AACACAC	A	7895.28	PASS	AB=0.802;AC=22;AF=0.393;AN=56;BaseQRankSum=-0.764;DP=790;FS=3.673;HRun=0;HaplotypeScore=269.3873;InbreedingCoeff=0.7928;MQ=49.09;MQ0=16;MQRankSum=-9.317;QD=22.37;ReadPosRankSum=-1.633;VQSLOD=4.1874;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:39,0:36:2.29:422,2,0	0/0:7,0:9:19.95:0,20,282	0/0:54,0:15:6.02:0,6,116	0/0:66,0:37:26.26:0,26,598	0/0:26,0:25:15.33:0,15,390	0/0:23,0:24:45.15:0,45,1337	0/0:22,0:22:43.32:0,43,1268	0/1:29,6:35:65.21:606,0,65	0/0:20,0:18:25.61:0,26,428	1/1:15,17:30:41.24:1113,41,0	1/1:7,14:21:37.52:422,38,0	0/0:15,0:25:34.83:0,35,847	0/0:22,0:21:24.18:0,24,415	0/0:15,0:15:17.69:0,18,268	0/0:32,0:35:10.24:0,10,548	0/0:17,0:19:30.95:0,31,647	0/0:18,0:18:21.50:0,21,329	0/1:12,6:16:48.96:333,0,49	1/1:12,10:19:39.13:748,39,0	1/1:13,15:28:43.02:669,43,0	1/1:30,6:32:17.77:288,18,0	0/0:24,0:23:21.07:0,21,379	0/0:24,0:26:32.42:0,32,647	0/0:11,0:20:20.96:0,21,417	1/1:14,9:23:32.80:576,33,0	1/1:24,26:46:84.28:1701,84,0	1/1:14,15:27:31.04:498,31,0	1/1:9,6:15:25.31:519,25,0
chr10	38398739	.	ATT	A	9429.60	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-14.957;DP=609;FS=3.677;HRun=10;HaplotypeScore=95.4563;InbreedingCoeff=0.9798;MQ=73.30;MQ0=1;MQRankSum=0.679;QD=28.84;ReadPosRankSum=4.596;VQSLOD=5.2274;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,52:55:99:1505,135,0	1/1:0,11:11:33.09:368,33,0	0/0:14,0:14:20.86:0,21,331	0/0:7,0:7:6.02:0,6,94	1/1:2,26:27:72.19:803,72,0	0/0:15,0:15:39.12:0,39,597	0/0:12,0:12:30.10:0,30,476	0/0:5,0:34:73.18:0,73,262	1/1:0,17:17:42.11:468,42,0	0/0:2,0:23:51.03:0,51,174	0/0:3,0:27:59.76:0,60,206	1/1:1,27:28:75.20:836,75,0	1/1:1,22:23:63.17:702,63,0	1/1:2,26:28:69.18:769,69,0	1/1:1,22:23:63.17:702,63,0	1/1:1,13:14:36.10:401,36,0	1/1:0,32:32:87.24:970,87,0	0/0:1,0:23:52.40:0,52,180	0/0:1,0:12:31.01:0,31,150	0/0:1,0:21:49.91:0,50,171	0/0:0,0:10:17.47:0,17,60	1/1:2,20:22:57.15:634,57,0	1/1:2,26:28:69.07:769,69,0	1/1:1,17:18:45.12:502,45,0	0/0:4,0:30:65.33:0,65,233	0/0:3,0:24:52.40:0,52,180	0/0:1,0:25:57.39:0,57,197	0/0:0,0:5:12.48:0,12,43
chr10	38399039	.	GCCTCCA	G	7809.68	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=10.239;DP=592;FS=0.775;HRun=0;HaplotypeScore=137.9106;InbreedingCoeff=0.9798;MQ=81.59;MQ0=0;MQRankSum=-11.983;QD=39.85;ReadPosRankSum=-0.665;VQSLOD=4.2433;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,105,3350	0/0:8,0:8:18.06:0,18,613	0/0:19,0:19:36.12:0,36,1007	0/0:26,0:26:66.22:0,66,1866	0/0:30,0:30:81.28:0,81,2600	0/0:20,0:20:57.20:0,57,1892	0/0:23,0:23:54.19:0,54,1731	1/1:8,16:24:42:617,42,0	0/0:26,0:26:57.19:0,57,1911	1/1:2,14:16:42.05:772,42,0	1/1:0,16:16:36.01:685,36,0	0/0:29,0:29:81.28:0,81,2694	0/0:20,0:20:54.19:0,54,1770	0/0:23,0:23:60.21:0,60,2002	0/0:27,0:27:75.26:0,75,2522	0/0:20,0:20:48.16:0,48,1575	0/0:35,0:35:81.23:0,81,2622	1/1:4,6:10:9.03:198,9,0	1/1:7,14:21:38.97:684,39,0	1/1:1,18:19:47.80:907,48,0	1/1:9,13:22:15.05:330,15,0	0/0:15,0:15:45.15:0,45,1516	0/0:14,0:14:42.14:0,42,1423	0/0:18,0:18:39.13:0,39,1321	1/1:4,12:16:33.11:727,33,0	1/1:1,22:23:66.20:1372,66,0	1/1:1,25:26:60.21:1320,60,0	1/1:0,3:3:9.03:198,9,0
chr10	38399118	.	T	TA	642.62	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-4.553;DP=582;FS=9.385;HRun=9;HaplotypeScore=78.2086;InbreedingCoeff=0.7737;MQ=73.28;MQ0=2;MQRankSum=0.287;QD=17.37;ReadPosRankSum=-0.718;VQSLOD=2.9295;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,29:37:46.24:737,46,0	0/0:8,0:8:24:0,24,208	0/0:18,1:15:3.40:0,3,154	0/0:14,0:15:12.78:0,13,119	0/0:33,0:33:89.95:0,90,777	0/0:27,0:28:71:0,71,603	0/0:18,1:19:20.79:0,21,406	0/0:18,0:17:50.99:0,51,443	0/0:26,0:26:65.98:0,66,573	0/0:22,0:22:59.98:0,60,521	0/0:21,0:21:42.03:0,42,385	0/0:19,0:19:50.97:0,51,438	0/0:17,1:18:11.81:0,12,331	0/0:21,0:21:53.99:0,54,469	0/0:30,0:30:77.98:0,78,677	0/0:14,0:14:38.97:0,39,334	0/0:27,0:27:74.98:0,75,651	0/0:17,0:17:47.96:0,48,409	0/0:18,0:18:44.99:0,45,390	0/0:19,0:19:41.97:0,42,364	0/0:17,0:17:41.99:0,42,364	0/0:25,0:25:59.97:0,60,521	0/0:22,0:22:53.95:0,54,464	0/0:18,0:18:44.99:0,45,391	0/0:21,0:21:50.98:0,51,442	0/0:15,0:15:35.97:0,36,312	0/0:30,0:30:71.83:0,72,625	0/0:4,0:4:8.99:0,9,78
chr10	38400182	.	A	AT	17184.19	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-4.776;DP=663;FS=12.869;HRun=7;HaplotypeScore=74.3509;InbreedingCoeff=0.9998;MQ=77.96;MQ0=2;MQRankSum=-6.893;QD=28.74;ReadPosRankSum=6.031;VQSLOD=4.0419;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,37:37:99:1232,102,0	1/1:1,15:16:39.12:471,39,0	0/0:17,0:17:40.60:0,41,451	0/0:15,0:15:36.70:0,37,322	1/1:1,32:33:96.19:1125,96,0	0/0:16,0:16:45.07:0,45,434	0/0:17,0:17:45.03:0,45,423	1/1:6,23:29:69.18:809,69,0	1/1:1,24:25:69.21:834,69,0	1/1:3,34:37:99:1232,102,0	1/1:1,18:20:54.17:651,54,0	1/1:1,0:17:40.25:205,40,0	1/1:4,23:27:71.03:837,71,0	1/1:2,29:31:78.24:942,78,0	1/1:3,21:24:57.17:689,57,0	1/1:4,21:25:57.17:689,57,0	1/1:1,15:16:36.11:433,36,0	1/1:0,13:13:36.11:435,36,0	1/1:6,10:16:33.10:398,33,0	1/1:2,22:24:57.14:673,57,0	1/1:1,26:27:69.21:834,69,0	1/1:2,29:31:79.40:913,79,0	1/1:2,1:25:57.57:296,58,0	1/1:0,0:20:51.75:263,52,0	1/1:0,21:21:57.17:689,57,0	1/1:6,30:36:90.28:1087,90,0	1/1:1,28:29:81.25:979,81,0	1/1:0,16:16:39.12:471,39,0
chr10	38404685	.	A	AT	1128.91	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-7.525;DP=694;FS=13.492;HRun=5;HaplotypeScore=64.7215;InbreedingCoeff=0.9451;MQ=85.16;MQ0=0;MQRankSum=-3.445;QD=35.28;ReadPosRankSum=1.445;VQSLOD=2.5791;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,32:32:93.30:1224,93,0	0/0:14,0:14:42.11:0,42,451	0/0:20,0:20:42.10:0,42,445	0/0:25,0:25:38.05:0,38,468	0/0:39,0:39:99:0,108,1161	0/0:20,0:20:60.15:0,60,645	0/0:22,0:22:63.14:0,63,669	0/0:34,0:34:99:0,99,1045	0/0:22,0:22:57.14:0,57,613	0/0:28,0:28:75.19:0,75,806	0/0:27,0:27:78.19:0,78,838	0/0:25,0:25:63.13:0,63,661	0/0:22,0:22:66.13:0,66,696	0/0:20,0:20:60.14:0,60,637	0/0:37,0:37:99:0,105,1128	0/0:23,0:23:69.15:0,69,733	0/0:25,0:25:69.17:0,69,741	0/0:19,0:19:54.14:0,54,580	0/0:23,0:23:60.13:0,60,637	0/0:27,0:27:72.18:0,72,774	0/0:20,0:20:60.15:0,60,645	0/0:26,0:26:72.18:0,72,774	0/0:24,0:24:69.15:0,69,733	0/0:27,0:27:81.19:0,81,861	0/0:22,0:22:63.16:0,63,677	0/0:38,0:38:99:0,108,1161	0/0:30,0:30:90.23:0,90,967	0/0:3,0:3:9.02:0,9,97
chr10	38406350	.	AT	A	5008.62	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=3.420;DP=722;FS=5.299;HRun=11;HaplotypeScore=94.0738;InbreedingCoeff=0.9748;MQ=74.73;MQ0=0;MQRankSum=0.826;QD=17.39;ReadPosRankSum=-0.572;VQSLOD=5.1301;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:52:99:0,112,594	0/0:9,0:10:20.88:0,21,199	0/0:16,0:15:12.01:0,12,112	0/0:15,0:15:23.83:0,24,216	0/0:29,1:30:47.47:0,47,684	0/0:15,0:15:30.08:0,30,320	0/0:24,1:25:54.13:0,54,569	1/1:9,22:31:24.91:411,25,0	0/0:23,2:25:4.85:0,5,463	1/1:5,25:31:76.92:619,77,0	1/1:3,11:14:26.93:222,27,0	0/0:7,0:31:57.05:0,57,297	0/0:21,1:22:32.46:0,32,522	0/0:22,2:25:19.72:0,20,605	0/0:29,2:32:37.72:0,38,784	0/0:20,1:24:35.21:0,35,548	0/0:36,0:37:99:0,100,1057	1/1:2,18:21:52.96:425,53,0	1/1:6,19:25:58.94:473,59,0	1/1:5,28:34:73.92:597,74,0	1/1:7,28:36:76.92:622,77,0	0/0:27,0:27:75.16:0,75,780	0/0:5,0:28:48.83:0,49,244	0/0:4,0:20:39.91:0,40,201	1/1:4,17:22:49.96:400,50,0	1/1:6,21:28:64.88:516,65,0	1/1:10,20:31:26.94:417,27,0	1/1:1,12:15:40.03:307,40,0
chr10	38408323	.	TG	T	16087.37	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=14.922;DP=872;FS=4.363;HRun=2;HaplotypeScore=114.1186;InbreedingCoeff=1.0000;MQ=74.49;MQ0=0;MQRankSum=-1.066;QD=36.73;ReadPosRankSum=5.894;VQSLOD=4.2603;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,48:48:99:1792,138,0	1/1:0,13:13:36.12:467,36,0	0/0:19,0:19:48.11:0,48,646	0/0:18,0:18:50.66:0,51,654	1/1:1,18:19:51.17:662,51,0	0/0:20,0:20:60.19:0,60,880	0/0:39,0:39:99:0,114,1707	0/0:31,0:31:93.30:0,93,1358	1/1:0,27:27:81.26:1052,81,0	0/0:38,0:38:99:0,111,1630	0/0:22,0:22:57.66:0,58,855	1/1:0,35:35:99:1285,99,0	1/1:0,38:38:99:1441,111,0	1/1:0,34:34:90.29:1169,90,0	1/1:0,48:48:99:1753,135,0	1/1:0,43:43:99:1636,126,0	1/1:2,44:46:99:1636,126,0	0/0:25,0:25:72.21:0,72,1034	0/0:23,0:23:60.20:0,60,895	0/0:18,0:18:54.18:0,54,808	0/0:77,0:77:99:0,226,3341	1/1:0,24:24:69.22:896,69,0	1/1:0,20:20:57.19:740,57,0	1/1:0,43:43:99:1558,120,0	0/0:23,0:23:69.21:0,69,1012	0/0:26,0:26:75.25:0,75,1107	0/0:36,0:36:99:0,105,1485	0/0:19,0:19:57.19:0,57,854
chr10	38409003	.	CA	C	5909.09	PASS	AB=0.667;AC=16;AF=0.286;AN=56;BaseQRankSum=14.069;DP=886;FS=87.840;HRun=3;HaplotypeScore=99.3853;InbreedingCoeff=0.5208;MQ=82.75;MQ0=0;MQRankSum=-1.924;QD=19.12;ReadPosRankSum=1.021;VQSLOD=0.6228;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,153,2155	0/0:9,0:9:27.09:0,27,389	0/0:27,0:27:81.22:0,81,1099	0/0:21,0:21:28.90:0,29,584	0/0:24,0:24:69.20:0,69,943	0/0:23,0:23:66.22:0,66,950	0/0:28,0:28:84.28:0,84,1209	0/1:11,17:28:26.70:452,0,27	0/0:38,0:38:99:0,111,1577	0/1:13,13:26:58.69:397,0,59	0/1:10,11:21:48.01:230,0,48	0/0:55,0:55:99:0,160,2269	0/0:38,0:38:99:0,105,1492	0/0:36,0:36:99:0,105,1476	0/0:51,0:51:99:0,153,2148	0/0:38,0:38:99:0,114,1626	0/0:35,0:35:99:0,105,1494	1/1:4,23:27:51.16:631,51,0	1/1:9,15:24:30.86:622,31,0	0/1:18,12:30:55.53:325,0,56	1/1:14,36:50:16.44:998,16,0	0/0:33,0:33:96.32:0,96,1383	0/0:25,0:25:75.23:0,75,1029	0/0:43,0:43:99:0,129,1833	0/1:13,10:23:60.66:329,0,61	0/1:14,17:31:0.68:541,0,1	1/1:6,33:39:87.22:1048,87,0	1/1:0,10:10:27.08:335,27,0
chr10	38410219	.	TC	T	5462.91	PASS	AB=0.586;AC=21;AF=0.375;AN=56;BaseQRankSum=10.230;DP=558;FS=3.602;HRun=5;HaplotypeScore=94.9862;InbreedingCoeff=0.8919;MQ=79.70;MQ0=0;MQRankSum=-1.011;QD=26.14;ReadPosRankSum=1.429;VQSLOD=4.4933;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,138,1834	0/0:3,0:3:6.02:0,6,72	0/0:15,0:15:36.03:0,36,433	0/0:18,0:17:45.12:0,45,563	0/0:8,0:8:21.07:0,21,285	0/0:16,0:16:42.10:0,42,526	0/0:42,0:42:99:0,123,1608	1/1:2,24:26:68.83:738,69,0	0/0:18,0:18:54.18:0,54,737	1/1:2,12:14:19.15:388,19,0	1/1:3,6:9:18.03:204,18,0	0/0:26,0:26:69.19:0,69,900	0/0:21,0:21:60.19:0,60,802	0/0:28,0:28:81.20:0,81,1055	0/0:20,0:20:54.18:0,54,737	0/0:14,0:14:42.06:0,42,535	0/0:26,0:26:69.23:0,69,942	1/1:2,21:23:56.46:645,56,0	1/1:6,15:21:44.92:489,45,0	1/1:0,6:6:15.04:170,15,0	1/1:2,37:39:99:1156,102,0	0/0:10,0:10:24.06:0,24,298	0/0:10,0:10:26.53:0,27,315	0/0:25,0:25:72.24:0,72,985	0/1:5,12:17:14.83:300,0,15	1/1:8,17:25:6.75:421,7,0	1/1:0,21:21:60.17:680,60,0	1/1:0,8:8:24.07:272,24,0
chr10	38411992	.	G	GTATGTGTGTGTGTA	3487.36	PASS	AB=1.000;AC=18;AF=0.375;AN=48;BaseQRankSum=-4.944;DP=249;FS=2.161;HRun=0;HaplotypeScore=86.3461;InbreedingCoeff=0.5406;MQ=51.16;MQ0=5;MQRankSum=-5.577;QD=31.70;ReadPosRankSum=-1.882;VQSLOD=2.4367;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:4:9.03:0,9,311	0/0:3,0:3:9.03:0,9,175	0/0:17,0:3:2.98:0,3,21	0/0:30,0:5:6.47:0,6,83	0/0:11,0:11:7.97:0,8,238	./.	0/0:4,0:4:3.01:0,3,109	1/1:26,0:26:69.24:1810,69,0	0/0:6,0:6:9.50:0,10,164	1/1:7,0:6:11.99:352,12,0	./.	0/0:7,0:7:15.05:0,15,368	0/0:12,0:12:11.82:0,12,183	0/1:11,0:11:15.50:15,0,175	0/1:9,0:9:13.49:13,0,172	0/0:7,0:7:9.03:0,9,171	0/0:13,0:13:12.51:0,13,201	1/1:17,0:17:9.50:244,10,0	1/1:7,0:6:6.91:179,7,0	1/1:6,0:5:2.99:24,3,0	./.	0/0:2,0:2:3:0,3,27	0/0:4,0:4:6.02:0,6,154	./.	0/0:4,7:11:0:0,0,1	1/1:4,0:4:12.04:305,12,0	1/1:7,0:7:6.01:144,6,0	1/1:16,0:16:12.04:400,12,0
chr10	38411994	.	A	ATGTGTGTG	2872.18	PASS	AB=1.000;AC=21;AF=0.438;AN=48;BaseQRankSum=-2.687;DP=240;FS=0.969;HRun=0;HaplotypeScore=70.9507;InbreedingCoeff=0.4390;MQ=51.43;MQ0=5;MQRankSum=-5.351;QD=21.93;ReadPosRankSum=-0.934;VQSLOD=2.7015;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:4:9.03:0,9,251	0/0:3,0:3:9.03:0,9,126	0/0:14,0:3:3.45:0,3,22	0/0:29,0:5:6:0,6,68	0/0:10,0:10:7.97:0,8,163	./.	0/0:4,0:4:3.01:0,3,84	1/1:25,0:25:69.24:1570,69,0	0/0:7,0:7:9.50:0,10,130	1/1:6,1:6:2.98:322,3,0	./.	0/0:6,0:6:15.05:0,15,386	0/1:12,0:12:36.74:37,0,73	0/1:11,0:11:15.50:15,0,92	0/1:8,0:8:13.49:13,0,117	0/0:7,0:7:9.03:0,9,121	0/0:11,0:11:12.51:0,13,168	1/1:8,7:17:10.26:184,10,0	1/1:6,0:6:2.36:110,2,0	1/1:6,0:5:2.99:24,3,0	./.	0/0:2,0:2:3:0,3,27	0/0:4,0:4:6.02:0,6,158	./.	1/1:11,0:11:4.99:17,5,0	1/1:4,0:4:12.04:287,12,0	1/1:7,0:7:6.01:121,6,0	1/1:8,8:16:11.63:335,12,0
chr10	38411996	.	GTATATATATATATA	G	564.77	PASS	AC=8;AF=0.286;AN=28;BaseQRankSum=-0.642;DP=224;FS=6.292;HRun=0;HaplotypeScore=87.6529;InbreedingCoeff=0.5485;MQ=48.01;MQ0=5;MQRankSum=-0.510;QD=13.13;ReadPosRankSum=1.793;VQSLOD=1.0517;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:4:3.01:0,3,165	./.	./.	0/0:28,0:4:0:0,0,0	./.	./.	./.	0/0:24,0:24:35.01:0,35,423	./.	0/0:7,0:6:3.01:0,3,136	./.	0/0:5,0:5:3.01:0,3,142	1/1:4,7:12:9.03:305,9,0	1/1:4,5:10:6.02:237,6,0	1/1:5,3:8:3.01:45,3,0	./.	1/1:13,0:13:6.02:86,6,0	0/0:13,0:13:12.04:0,12,287	0/0:6,0:5:12.81:0,13,230	./.	./.	./.	./.	./.	0/0:8,0:9:5.60:0,6,27	./.	0/0:6,0:6:3.01:0,3,80	0/0:14,0:15:13.74:0,14,338
chr10	38413591	.	TTG	T	4426.14	PASS	AB=0.960;AC=34;AF=0.630;AN=54;BaseQRankSum=4.652;DP=649;FS=2.080;HRun=0;HaplotypeScore=177.6680;InbreedingCoeff=-0.0617;MQ=63.54;MQ0=12;MQRankSum=-0.899;QD=7.98;ReadPosRankSum=2.251;VQSLOD=4.3964;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:33:36.46:96,0,36	1/1:2,6:13:32.96:314,33,0	./.	0/0:21,0:17:5.96:0,6,45	1/1:7,14:25:51.09:549,51,0	0/0:30,0:30:45.14:0,45,667	0/1:16,1:17:1.08:1,0,429	0/1:30,0:31:33.40:64,0,33	1/1:9,6:19:35.98:353,36,0	0/1:26,0:26:35.45:35,0,122	0/1:19,0:18:14.25:37,0,14	0/1:15,1:15:19.31:19,0,134	1/1:10,7:24:41.84:400,42,0	1/1:4,6:24:52.52:427,53,0	1/1:9,9:30:70.97:664,71,0	1/1:7,6:21:38.93:361,39,0	1/1:16,6:22:19.12:279,19,0	0/1:21,0:19:56.49:56,0,86	0/1:19,0:16:1.45:1,0,58	0/1:28,0:28:19.44:22,0,19	1/1:20,0:19:14.98:85,15,0	1/1:12,8:26:42.08:457,42,0	0/1:30,1:30:46.87:47,0,309	0/1:23,1:23:25.14:25,0,69	0/1:28,0:24:32.50:33,0,42	0/0:25,0:24:6.50:0,7,152	0/1:22,1:23:38.68:39,0,96	0/1:12,0:10:22.84:63,0,23
chr10	38413617	.	G	GTC	7694.46	PASS	AB=0.821;AC=41;AF=0.732;AN=56;BaseQRankSum=6.441;DP=698;FS=5.239;HRun=0;HaplotypeScore=203.7571;InbreedingCoeff=0.6837;MQ=47.46;MQ0=17;MQRankSum=-4.203;QD=13.74;ReadPosRankSum=1.291;VQSLOD=4.4725;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:37:33.05:0,33,216	1/1:15,0:15:4.22:64,4,0	0/0:6,0:2:6:0,6,52	0/0:14,0:7:14.57:0,15,113	1/1:31,0:31:44.14:215,44,0	0/0:24,0:24:72.07:0,72,877	0/0:26,0:26:74.77:0,75,811	1/1:49,0:39:80.96:886,81,0	1/1:23,0:23:11.84:219,12,0	1/1:13,10:23:42.11:884,42,0	1/1:8,10:16:20.43:338,20,0	0/1:20,0:21:25.18:25,0,108	1/1:22,0:22:38.42:203,38,0	1/1:28,0:28:36.54:192,37,0	1/1:31,0:31:61.44:274,61,0	1/1:26,0:26:48.77:283,49,0	1/1:34,0:34:54.10:445,54,0	1/1:16,9:23:39.09:650,39,0	1/1:17,2:15:12.17:332,12,0	1/1:22,8:29:24.02:347,24,0	1/1:14,8:20:24.06:364,24,0	1/1:24,0:24:21.50:169,22,0	0/1:23,1:24:52.79:53,0,304	0/0:30,0:29:8.76:0,9,103	1/1:20,10:25:21.04:323,21,0	1/1:15,9:23:18.46:641,18,0	1/1:18,8:26:18.45:534,18,0	0/1:5,8:10:2.34:254,0,2
chr10	38413629	.	CTGTGTCTG	C	7263.33	PASS	AB=1.000;AC=32;AF=0.593;AN=54;BaseQRankSum=3.272;DP=689;FS=0.000;HRun=0;HaplotypeScore=250.6973;InbreedingCoeff=0.4876;MQ=48.01;MQ0=19;MQRankSum=-4.000;QD=14.64;ReadPosRankSum=2.489;VQSLOD=3.5242;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:24,6:30:29.62:652,30,0	1/1:17,0:17:35.78:473,36,0	0/0:14,0:7:21.07:0,21,405	0/0:14,0:9:23.56:0,24,450	1/1:27,0:27:29.75:300,30,0	0/0:24,0:24:66.23:0,66,2084	0/0:30,0:30:69.18:0,69,1640	1/1:47,0:38:39.67:280,40,0	1/1:26,0:26:59.26:601,59,0	0/1:22,0:22:65.80:66,0,177	0/0:20,0:19:8.12:0,8,27	0/0:21,0:20:6.02:0,6,168	1/1:23,0:23:50.64:663,51,0	1/1:29,0:29:68.65:1046,69,0	1/1:31,0:31:74.58:1111,75,0	1/1:28,0:28:62.27:781,62,0	1/1:38,0:38:57.39:531,57,0	0/1:22,0:20:17.95:18,0,191	0/1:27,0:24:76.50:119,0,76	0/1:26,0:25:5.86:6,0,19	1/1:18,0:16:0.47:1,0,0	1/1:24,0:24:44.73:519,45,0	0/0:20,0:19:7.89:0,8,166	./.	0/1:29,0:24:8.19:8,0,9	0/1:21,0:20:69.03:69,0,197	0/0:22,0:22:9.25:0,9,89	1/1:10,0:7:3.83:20,4,0
chr10	38413635	.	CTG	C	8857.96	PASS	AB=0.786;AC=38;AF=0.704;AN=54;BaseQRankSum=3.405;DP=682;FS=0.819;HRun=0;HaplotypeScore=183.4472;InbreedingCoeff=0.4271;MQ=50.11;MQ0=13;MQRankSum=-7.888;QD=16.25;ReadPosRankSum=6.260;VQSLOD=4.8661;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:15,15:29:28.76:293,29,0	0/1:5,11:16:11.40:332,0,11	0/0:18,0:9:24.08:0,24,408	0/0:16,0:12:29.97:0,30,392	0/1:6,20:26:19.55:268,0,20	0/0:26,0:26:78.27:0,78,1356	0/0:29,0:29:81.26:0,81,1371	1/1:31,16:38:76.35:776,76,0	1/1:5,21:26:14.06:651,14,0	1/1:17,3:20:40.64:381,41,0	0/1:17,4:20:24.66:38,0,25	0/1:20,1:20:1.94:19,0,2	1/1:6,18:24:6.07:523,6,0	1/1:6,23:29:7.92:755,8,0	1/1:7,24:31:36.96:855,37,0	1/1:5,23:28:5.96:769,6,0	1/1:9,29:38:63.48:958,63,0	1/1:24,0:22:11.89:158,12,0	1/1:27,1:26:76.56:904,77,0	0/1:26,3:28:21.34:84,0,21	1/1:14,0:13:0.47:1,0,0	1/1:5,17:22:6.96:434,7,0	0/0:19,1:19:11.11:0,11,50	./.	0/1:20,4:22:5.42:39,0,5	1/1:19,2:20:35.43:390,35,0	1/1:20,3:23:17.42:153,17,0	1/1:3,0:3:6.02:76,6,0
chr10	38413637	.	G	GTGTC	11496.78	PASS	AB=1.000;AC=39;AF=0.696;AN=56;BaseQRankSum=3.101;DP=700;FS=0.837;HRun=0;HaplotypeScore=203.5699;InbreedingCoeff=0.1516;MQ=50.60;MQ0=13;MQRankSum=-5.791;QD=18.94;ReadPosRankSum=2.171;VQSLOD=4.6063;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:31,0:30:33.06:80,0,33	0/1:17,0:17:75.14:203,0,75	0/0:18,0:9:24.08:0,24,405	0/0:18,0:13:30.07:0,30,416	0/1:25,0:25:88.54:319,0,89	0/0:28,0:28:81.25:0,81,1422	0/0:29,0:29:81.26:0,81,1430	1/1:46,0:37:89.05:1160,89,0	0/1:26,0:26:97.42:717,0,97	1/1:6,13:20:49.10:815,49,0	1/1:8,14:21:8.61:86,9,0	1/1:4,2:22:6.02:133,6,0	0/1:24,0:24:67.90:503,0,68	0/1:28,0:28:49.33:606,0,49	0/1:31,0:31:19.28:641,0,19	0/1:28,0:28:27.19:796,0,27	1/1:37,1:38:5.38:1355,5,0	1/1:5,18:22:26.58:550,27,0	1/1:3,24:27:77.95:1208,78,0	1/1:6,23:29:11.63:153,12,0	1/1:6,11:17:1.22:3,1,0	0/1:22,0:23:74.47:410,0,74	1/1:3,1:18:11.35:114,11,0	1/1:5,23:27:3.01:61,3,0	1/1:5,18:23:8.51:86,9,0	1/1:5,15:22:58.23:1019,58,0	1/1:6,19:26:18.06:361,18,0	1/1:0,3:3:6.02:115,6,0
chr10	38414270	.	C	CGTGTGTGTGTGTGT	9033.26	PASS	AB=0.830;AC=45;AF=0.865;AN=52;BaseQRankSum=1.176;DP=694;FS=0.000;HRun=0;HaplotypeScore=282.2318;InbreedingCoeff=0.5807;MQ=57.53;MQ0=5;MQRankSum=-5.490;QD=15.49;ReadPosRankSum=-2.283;VQSLOD=2.4666;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:31:7.43:283,7,0	1/1:18,0:18:2.79:200,3,0	./.	0/0:28,0:22:3.01:0,3,45	1/1:23,0:23:6.89:71,7,0	0/0:13,0:15:24.08:0,24,762	0/0:34,0:38:74.37:0,74,2335	1/1:27,0:26:26.30:613,26,0	1/1:21,4:26:6.49:343,6,0	1/1:20,0:18:17.27:665,17,0	1/1:7,0:7:12.03:213,12,0	1/1:24,0:27:8.92:368,9,0	1/1:26,0:26:15.03:509,15,0	1/1:21,3:26:2.04:101,2,0	1/1:23,5:30:3.42:202,3,0	1/1:22,1:31:6.94:248,7,0	1/1:23,5:31:27.09:1424,27,0	1/1:19,0:19:21.06:526,21,0	1/1:23,0:23:27.41:695,27,0	1/1:19,0:19:6.49:189,6,0	1/1:26,0:25:12.01:209,12,0	0/1:31,4:38:0.01:0,0,0	1/1:25,0:25:9.03:189,9,0	1/1:29,0:32:1.41:2,1,0	1/1:20,0:19:15.52:325,16,0	1/1:22,0:20:24.07:908,24,0	1/1:30,0:30:24.07:748,24,0	./.
chr10	38416221	.	TATGCAC	T	918.11	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=6.757;DP=825;FS=0.919;HRun=0;HaplotypeScore=171.7483;InbreedingCoeff=0.8033;MQ=57.08;MQ0=4;MQRankSum=-6.187;QD=10.43;ReadPosRankSum=2.918;VQSLOD=2.8097;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:78.25:0,78,2114	0/0:11,0:11:33.11:0,33,895	0/0:34,0:13:29.84:0,30,376	0/0:31,0:16:0.28:0,0,403	0/0:31,0:30:78.27:0,78,2418	0/0:21,0:21:63.22:0,63,1852	0/0:37,0:37:69.22:0,69,1902	0/0:42,0:42:93.32:0,93,2500	0/0:36,0:36:93.30:0,93,2781	0/0:34,0:34:86.90:0,87,2710	0/0:16,0:16:42.14:0,42,1359	1/1:5,23:28:33.11:719,33,0	0/0:22,0:22:60.21:0,60,1756	0/0:25,0:25:63.20:0,63,1763	0/0:45,0:45:99:0,126,3913	0/0:30,0:30:81.25:0,81,2447	0/0:36,0:36:81.26:0,81,2376	0/0:22,0:22:45.07:0,45,1190	0/0:21,0:19:42.12:0,42,1003	0/0:29,0:29:78.27:0,78,2396	0/0:62,0:62:99:0,138,4337	0/0:25,0:24:66.21:0,66,1922	1/1:5,25:30:9:196,9,0	1/1:10,20:30:6.02:131,6,0	0/0:20,0:20:45.15:0,45,1392	0/0:41,0:41:99:0,111,3218	0/0:28,0:28:81.28:0,81,2537	0/0:4,0:4:3.01:0,3,101
chr10	38417920	.	TA	T	2604.32	PASS	AB=0.715;AC=23;AF=0.411;AN=56;BaseQRankSum=7.542;DP=562;FS=6.744;HRun=13;HaplotypeScore=69.1147;InbreedingCoeff=0.7751;MQ=80.91;MQ0=0;MQRankSum=0.856;QD=11.42;ReadPosRankSum=5.450;VQSLOD=3.2753;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,23:29:38.37:409,38,0	1/1:0,6:6:3.18:76,3,0	0/0:27,0:24:20.98:0,21,181	0/1:18,1:17:20.30:20,0,114	0/1:11,20:31:1.79:310,0,2	0/0:22,0:24:53.06:0,53,543	0/0:22,2:24:16.08:0,16,449	0/0:36,0:36:50.09:0,50,609	1/1:2,14:18:42.84:296,43,0	0/0:31,0:31:35.84:0,36,465	0/0:23,0:23:57.07:0,57,546	1/1:1,10:11:20.86:153,21,0	1/1:1,8:11:21.63:138,22,0	1/1:2,14:16:32.74:237,33,0	0/1:5,12:17:2.34:148,0,2	1/1:3,14:17:32.80:241,33,0	1/1:6,27:33:48.37:518,48,0	0/0:18,1:19:23.15:0,23,381	0/0:13,0:14:40.94:0,41,348	0/0:18,0:18:44.97:0,45,406	0/0:7,0:8:20.82:0,21,180	0/0:13,1:16:10.88:0,11,241	1/1:0,10:11:19.87:137,20,0	1/1:1,7:8:17.90:131,18,0	0/0:23,0:26:50.90:0,51,474	0/0:20,1:21:35.11:0,35,471	0/0:20,3:23:2.37:0,2,316	0/0:18,1:22:33.75:0,34,492
chr10	38419092	.	TA	T	7051.66	PASS	AB=0.995;AC=41;AF=0.732;AN=56;BaseQRankSum=3.478;DP=645;FS=6.507;HRun=10;HaplotypeScore=108.6673;InbreedingCoeff=0.5630;MQ=72.19;MQ0=2;MQRankSum=-3.779;QD=13.03;ReadPosRankSum=4.033;VQSLOD=4.5208;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,24:28:71.98:625,72,0	1/1:0,9:9:26.99:234,27,0	0/0:15,1:16:2.69:0,3,260	0/0:12,0:12:23.66:0,24,256	1/1:3,34:37:95.90:825,96,0	0/0:21,0:21:48.10:0,48,509	0/0:24,0:25:75:0,75,790	0/0:30,0:30:2.26:0,2,33	1/1:4,18:22:50.99:443,51,0	1/1:6,20:26:59.98:520,60,0	1/1:4,26:30:74.88:641,75,0	1/1:0,16:16:41.99:364,42,0	1/1:2,23:25:62.97:544,63,0	1/1:2,12:14:35.99:312,36,0	1/1:1,17:18:38.99:339,39,0	1/1:5,18:23:59.19:498,59,0	1/1:0,23:23:62.99:547,63,0	1/1:3,15:18:38.98:338,39,0	0/1:29,0:29:2.43:26,0,2	0/1:30,0:30:1.98:8,0,2	0/1:16,0:16:0:3,0,0	1/1:19,0:19:0.90:4,1,0	1/1:3,22:26:67.94:570,68,0	1/1:2,10:12:17.99:156,18,0	1/1:27,0:27:3.14:17,3,0	0/1:39,1:40:25.42:25,0,39	1/1:32,0:32:1.82:8,2,0	0/1:21,0:19:0:3,0,0
chr10	38419101	.	AAG	A	8835.42	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=-10.965;DP=656;FS=2.996;HRun=0;HaplotypeScore=120.2216;InbreedingCoeff=0.9523;MQ=75.81;MQ0=2;MQRankSum=-1.101;QD=33.22;ReadPosRankSum=0.507;VQSLOD=7.0099;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:72.52:0,73,398	0/0:9,0:9:25.17:0,25,130	0/0:16,0:16:46.75:0,47,558	0/1:18,0:17:1.40:1,0,394	0/0:34,0:34:95.92:0,96,548	0/0:18,0:18:48.15:0,48,779	0/0:31,0:31:93.24:0,93,1426	1/1:0,33:33:99:1253,99,0	0/0:19,0:19:52.27:0,52,291	0/0:26,0:26:75.99:0,76,478	0/0:28,0:28:78.40:0,78,447	0/0:18,0:18:46.64:0,47,287	0/0:28,0:28:72.36:0,72,425	0/0:16,0:16:46.83:0,47,305	0/0:19,0:19:43.55:0,44,255	0/0:22,0:22:64.18:0,64,387	0/0:26,0:25:69.55:0,70,413	0/0:16,0:16:40.71:0,41,227	1/1:3,25:28:81.27:1034,81,0	1/1:2,29:31:87.16:1130,87,0	1/1:1,16:17:42.13:571,42,0	1/1:0,19:19:54.03:686,54,0	0/0:28,0:28:57.55:0,58,412	0/0:11,0:11:20.38:0,20,118	1/1:0,24:24:63.21:869,63,0	1/1:1,41:42:99:1533,107,0	1/1:0,32:32:81.06:1130,81,0	1/1:4,18:20:45.15:629,45,0
chr10	38419877	.	CT	C	17876.96	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=7.077;DP=605;FS=2.173;HRun=2;HaplotypeScore=61.7879;InbreedingCoeff=0.9853;MQ=75.44;MQ0=0;MQRankSum=-4.962;QD=33.41;ReadPosRankSum=3.176;VQSLOD=5.0411;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,40:40:99:1441,111,0	1/1:0,6:6:15.05:194,15,0	0/0:15,0:15:45.09:0,45,608	0/0:7,0:7:21.03:0,21,280	1/1:0,29:29:63.20:818,63,0	0/0:22,0:22:63.21:0,63,940	0/0:26,0:26:78.25:0,78,1149	1/1:1,26:27:75.24:974,75,0	1/1:1,22:23:63.20:818,63,0	1/1:0,28:28:84.26:1075,84,0	1/1:0,6:6:12.04:156,12,0	1/1:1,25:26:66.21:857,66,0	1/1:0,29:29:69.22:896,69,0	1/1:0,28:28:78.25:1013,78,0	1/1:1,24:25:66.11:834,66,0	1/1:0,21:21:54.18:701,54,0	1/1:0,18:18:54.18:701,54,0	1/1:1,19:20:48.16:623,48,0	1/1:0,17:17:51.17:662,51,0	1/1:0,14:14:36.12:467,36,0	1/1:0,34:34:93.30:1208,93,0	1/1:2,24:26:39.13:506,39,0	1/1:0,20:20:42.14:545,42,0	1/1:1,29:30:81.26:1052,81,0	1/1:0,20:20:45.14:584,45,0	1/1:0,21:21:63.20:818,63,0	1/1:0,18:18:48.16:623,48,0	1/1:0,9:9:24.08:312,24,0
chr10	38420041	.	GTACA	G	3485.64	PASS	AB=0.977;AC=18;AF=0.333;AN=54;BaseQRankSum=-4.430;DP=688;FS=7.321;HRun=0;HaplotypeScore=127.7588;InbreedingCoeff=0.8048;MQ=66.51;MQ0=1;MQRankSum=4.095;QD=14.83;ReadPosRankSum=2.387;VQSLOD=2.8910;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:47:8.97:0,9,71	1/1:3,10:13:12.04:193,12,0	0/0:26,0:20:9.35:0,9,94	0/1:21,0:16:0:0,0,0	1/1:5,17:22:15.05:241,15,0	0/1:20,1:20:18.08:18,0,571	0/0:34,0:34:42.05:0,42,704	0/0:30,0:28:54.14:0,54,913	1/1:8,13:21:17.80:289,18,0	0/0:23,0:22:27.06:0,27,395	./.	0/0:32,0:32:11.15:0,11,1213	1/1:4,13:17:24.08:385,24,0	1/1:6,21:27:30.10:482,30,0	1/1:7,27:33:48.16:771,48,0	1/1:5,12:17:18.06:289,18,0	1/1:11,31:41:51.17:819,51,0	0/0:18,0:17:8.99:0,9,102	0/0:27,0:25:39.07:0,39,609	0/0:15,0:15:6.46:0,6,50	0/0:30,0:36:11.80:0,12,167	0/0:25,0:22:7.81:0,8,51	0/0:11,0:11:27.09:0,27,571	0/0:29,1:29:14.98:0,15,1222	0/0:22,0:22:15:0,15,174	0/0:29,0:23:45.08:0,45,680	0/0:20,0:18:17.98:0,18,196	0/0:14,0:13:10.83:0,11,133
chr10	38420071	.	A	ACATACATGCATGCATG	4492.53	PASS	AB=0.764;AC=14;AF=0.269;AN=52;BaseQRankSum=-4.855;DP=730;FS=1.609;HRun=0;HaplotypeScore=238.4788;InbreedingCoeff=0.4571;MQ=55.66;MQ0=3;MQRankSum=-4.407;QD=17.83;ReadPosRankSum=-4.950;VQSLOD=2.9734;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:15,0:15:27.01:0,27,669	0/0:7,0:5:5.02:0,5,71	0/0:8,0:3:2.87:0,3,31	0/0:26,0:26:36.11:0,36,975	0/0:23,0:22:54.14:0,54,1728	0/0:29,0:29:56.84:0,57,1199	0/1:36,0:34:99:538,0,258	0/0:23,0:23:42.06:0,42,1121	1/1:2,8:30:53.74:1842,54,0	./.	0/0:33,0:33:72.22:0,72,2471	0/0:15,0:15:30.10:0,30,1079	0/0:27,0:27:38.96:0,39,1351	0/0:30,0:30:54.17:0,54,1972	0/0:15,0:15:24.08:0,24,850	0/0:46,0:45:72.21:0,72,2339	1/1:5,9:25:5.98:53,6,0	0/1:6,0:28:47.05:677,0,47	0/0:1,0:17:0.47:0,0,1	0/1:35,0:34:19.50:19,0,152	0/0:3,0:30:1.36:0,1,3	0/0:18,0:18:45.07:0,45,1292	0/0:38,0:37:99:0,99,3078	1/1:2,0:20:6.02:136,6,0	0/1:0,0:29:44.75:966,0,45	1/1:2,0:20:5.95:111,6,0	1/1:0,0:17:11.94:150,12,0
chr10	38420455	.	CACAT	C	4064.70	PASS	AB=0.724;AC=20;AF=0.400;AN=50;BaseQRankSum=1.482;DP=711;FS=2.728;HRun=0;HaplotypeScore=128.6027;InbreedingCoeff=0.7261;MQ=54.87;MQ0=9;MQRankSum=3.661;QD=13.07;ReadPosRankSum=1.482;VQSLOD=3.0023;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:36:12.03:0,12,169	0/0:14,0:14:21.07:0,21,490	./.	./.	1/1:7,19:27:45.15:661,45,0	1/1:3,9:12:9.02:120,9,0	1/1:26,16:41:18.06:276,18,0	0/0:35,0:29:8.79:0,9,53	1/1:14,14:24:27.09:414,27,0	0/0:14,0:30:29.83:0,30,436	./.	1/1:18,17:35:27.09:413,27,0	1/1:13,13:26:30.10:460,30,0	1/1:13,13:25:18.06:276,18,0	1/1:8,16:25:30.10:442,30,0	0/0:20,0:20:27.09:0,27,630	0/1:21,14:35:17.98:427,0,18	0/0:26,0:31:6:0,6,76	0/0:14,0:13:12.04:0,12,233	0/0:8,0:23:18.06:0,18,312	0/0:26,0:29:11.99:0,12,170	0/0:8,0:22:24.07:0,24,375	1/1:6,12:18:18.06:276,18,0	0/1:23,13:36:27.42:298,0,27	0/0:30,1:31:45.15:0,45,1050	0/0:20,0:32:30.76:0,31,523	0/0:7,0:16:3.01:0,3,52	0/0:6,0:9:3.01:0,3,52
chr10	38421595	.	ATG	A	1727.55	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.756;DP=905;FS=3.215;HRun=0;HaplotypeScore=158.3935;InbreedingCoeff=0.9983;MQ=54.55;MQ0=8;MQRankSum=0.902;QD=21.87;ReadPosRankSum=-0.072;VQSLOD=4.0850;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:29.30:0,29,684	0/0:7,0:7:21.03:0,21,278	0/0:36,0:17:38.67:0,39,564	0/0:48,0:22:50.35:0,50,750	0/0:25,0:25:63.22:0,63,1071	0/0:30,0:30:84.76:0,85,1416	0/0:31,0:31:69.23:0,69,1216	0/0:30,0:30:72.68:0,73,1187	0/0:38,0:38:96.33:0,96,1606	0/0:41,0:40:99:0,111,1821	0/0:28,0:28:66.13:0,66,954	1/1:4,21:25:72.21:919,72,0	0/0:36,0:36:99:0,105,1712	0/0:34,0:34:84.29:0,84,1418	0/0:42,0:42:99:0,117,1946	0/0:30,0:30:81.28:0,81,1370	0/0:44,0:44:99:0,105,1714	0/0:22,0:22:57.15:0,57,905	0/0:20,0:20:50.19:0,50,751	0/0:43,0:43:99:0,108,1769	0/0:74,0:74:99:0,177,3279	0/0:28,0:28:78.27:0,78,1296	1/1:3,16:17:41.96:457,42,0	1/1:16,19:33:44.93:494,45,0	0/0:23,0:23:65.71:0,66,1076	0/0:41,0:41:99:0,117,1935	0/0:23,0:23:60.17:0,60,956	0/0:22,0:22:66.23:0,66,1122
chr10	38421645	.	ATGTG	A	2925.12	PASS	AB=0.694;AC=13;AF=0.232;AN=56;BaseQRankSum=14.268;DP=962;FS=6.867;HRun=0;HaplotypeScore=205.3228;InbreedingCoeff=0.9282;MQ=54.54;MQ0=20;MQRankSum=-5.384;QD=15.31;ReadPosRankSum=0.309;VQSLOD=2.7754;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:14,0:24:2.45:63,0,2	0/0:15,0:15:30.10:0,30,766	0/0:57,0:13:22.58:0,23,453	0/0:49,0:19:33.57:0,34,617	0/0:22,0:22:51.17:0,51,1256	0/0:29,0:29:75.26:0,75,1881	0/0:37,0:40:96.07:0,96,2248	0/0:40,0:40:96.12:0,96,2311	0/0:44,0:44:99:0,114,2808	1/1:5,0:38:88.23:717,88,0	1/1:1,0:27:12:112,12,0	1/1:6,27:33:60.12:986,60,0	0/0:35,0:35:99:0,105,2633	0/0:30,0:30:81.28:0,81,2033	0/0:44,0:46:99:0,120,2878	0/0:32,0:32:93.32:0,93,2201	0/0:32,1:33:87.09:0,87,2130	1/1:6,1:9:16.57:151,17,0	0/0:25,0:22:53.67:0,54,1225	0/0:38,0:38:93.32:0,93,2283	0/0:79,1:80:99:0,208,4915	0/0:30,0:30:87.30:0,87,2057	1/1:1,21:22:27.09:458,27,0	1/1:5,32:37:42.01:627,42,0	0/0:27,0:27:72.25:0,72,1777	0/0:42,0:44:61.55:0,62,2710	0/0:34,0:35:95.90:0,96,2149	0/0:19,0:19:54.18:0,54,1245
chr10	38421653	.	GT	G	529.55	PASS	AB=0.944;AC=8;AF=0.143;AN=56;BaseQRankSum=13.815;DP=970;FS=1.129;HRun=1;HaplotypeScore=167.4366;InbreedingCoeff=0.1698;MQ=54.72;MQ0=21;MQRankSum=-4.326;QD=2.83;ReadPosRankSum=2.375;VQSLOD=-0.0346;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:22,3:24:51.47:144,0,51	0/0:15,0:15:36.08:0,36,537	0/0:55,0:12:30.42:0,30,405	0/0:47,0:19:42.14:0,42,628	0/0:21,0:21:54.04:0,54,828	0/0:31,0:31:87.27:0,87,1333	0/0:42,0:42:99:0,111,1693	0/0:41,0:40:99:0,121,1798	0/0:41,0:41:99:0,120,1877	1/1:34,0:34:47.08:376,47,0	0/1:28,0:28:33.60:34,0,57	0/1:30,0:30:13.16:13,0,71	0/0:40,0:40:99:0,117,1806	0/0:32,0:32:87.28:0,87,1366	0/0:45,0:45:99:0,124,1947	0/0:35,0:35:99:0,105,1599	0/0:34,0:34:88.01:0,88,1387	0/1:7,3:10:19.14:89,0,19	0/0:22,1:19:12.24:0,12,774	0/0:43,0:43:99:0,126,1882	0/0:84,0:84:99:0,228,3509	0/0:31,0:31:90.31:0,90,1428	0/1:24,0:24:2.96:3,0,90	0/1:36,0:36:1.73:2,0,48	0/0:25,0:25:72.25:0,72,1151	0/0:42,0:42:99:0,110,1853	0/0:36,0:36:99:0,104,1555	0/0:20,0:20:60.20:0,60,939
chr10	38421998	.	TTGTGTG	T	6729.17	PASS	AB=0.654;AC=22;AF=0.393;AN=56;BaseQRankSum=3.920;DP=923;FS=7.272;HRun=0;HaplotypeScore=281.3205;InbreedingCoeff=0.7206;MQ=54.04;MQ0=12;MQRankSum=-13.328;QD=16.37;ReadPosRankSum=-6.172;VQSLOD=2.3678;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:16,0:41:15.88:16,0,112	1/1:2,14:16:26.85:318,27,0	0/0:42,0:19:17.78:0,18,297	0/0:45,0:22:32.51:0,33,729	1/1:5,36:42:50.37:360,50,0	0/0:14,0:15:33.11:0,33,1001	0/0:24,0:24:47.89:0,48,1351	0/0:20,0:41:69.80:0,70,721	1/1:5,30:35:49.03:841,49,0	0/0:5,0:50:16.20:0,16,242	0/0:8,0:30:2.52:0,3,124	1/1:3,24:28:44.67:465,45,0	1/1:3,30:33:83.76:1202,84,0	1/1:6,29:35:71.60:837,72,0	1/1:4,42:46:92.50:1029,92,0	1/1:7,36:43:92.32:856,92,0	0/1:8,11:19:8.14:182,0,8	0/1:9,0:29:2.69:3,0,99	0/0:6,0:19:47.74:0,48,534	0/0:9,0:38:92.79:0,93,1069	0/0:10,0:35:46.31:0,46,576	0/0:5,0:29:60.09:0,60,742	1/1:2,26:28:56.39:519,56,0	0/1:11,5:16:6.84:101,0,7	0/0:7,0:30:57.08:0,57,703	0/0:10,0:45:98.50:0,99,1153	0/0:13,0:51:99:0,100,1232	0/0:5,0:13:15.05:0,15,195
chr10	38423569	.	CTTATTTAT	C	1002.55	PASS	AB=1.000;AC=17;AF=0.425;AN=40;BaseQRankSum=2.133;DP=117;FS=23.486;HRun=0;HaplotypeScore=41.0481;InbreedingCoeff=0.4768;MQ=58.12;MQ0=1;MQRankSum=-0.735;QD=20.05;ReadPosRankSum=1.106;VQSLOD=0.9318;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:5,0:5:10.98:58,0,11	1/1:1,2:3:3.01:77,3,0	0/0:5,0:4:3.01:0,3,89	./.	1/1:2,7:9:11.57:128,12,0	0/0:8,0:8:15.05:0,15,546	0/0:2,0:2:3.01:0,3,97	0/0:21,0:19:42.61:0,43,1095	1/1:1,2:3:3.01:77,3,0	./.	1/1:4,0:4:6.02:126,6,0	0/0:0,0:2:3:0,3,25	1/1:0,2:2:3.01:77,3,0	1/1:2,0:2:3:27,3,0	./.	./.	1/1:7,8:15:15.05:386,15,0	1/1:7,0:7:9.03:186,9,0	0/0:8,0:8:15.05:0,15,296	./.	./.	./.	0/0:0,0:1:3:0,3,25	./.	0/0:1,0:3:3.01:0,3,93	0/0:3,0:3:3.01:0,3,78	0/0:1,0:1:3.01:0,3,84	0/0:7,0:10:9.03:0,9,269
chr10	38423961	.	TCATTGGTTGCACATAGCCA	T	11061.47	PASS	AB=0.630;AC=15;AF=0.278;AN=54;BaseQRankSum=13.438;DP=638;FS=2.079;HRun=0;HaplotypeScore=326.2270;InbreedingCoeff=0.8971;MQ=70.33;MQ0=1;MQRankSum=-12.273;QD=84.44;ReadPosRankSum=2.408;VQSLOD=4.0277;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:53:99:0,148,12522	0/0:9,0:9:27.09:0,27,2225	0/0:33,0:30:84.29:0,84,5889	0/0:26,0:26:78.26:0,78,4928	0/0:26,0:26:66.23:0,66,5278	0/0:23,0:23:69.24:0,69,5760	0/0:35,0:35:99:0,102,8166	1/1:11,7:18:24.07:1048,24,0	0/0:28,0:28:80.89:0,81,6734	0/0:18,0:18:54.19:0,54,4693	0/0:18,0:18:51.18:0,51,3916	0/0:28,0:28:81.26:0,81,7073	0/0:25,0:25:75.26:0,75,6447	0/0:24,0:24:69.24:0,69,5775	0/0:27,0:27:81.27:0,81,7054	0/0:28,0:28:84.24:0,84,7044	0/0:39,0:39:99:0,114,9784	0/0:31,0:31:90.31:0,90,7453	1/1:2,7:8:18.06:908,18,0	1/1:2,12:14:33.07:1595,33,0	1/1:7,10:16:12.47:506,12,0	1/1:2,10:12:24.04:1152,24,0	0/0:13,0:13:39.13:0,39,3441	0/0:22,0:22:63.22:0,63,5390	1/1:1,5:6:15.05:809,15,0	0/1:14,20:34:99:2920,0,758	1/1:4,16:19:42.10:2123,42,0	./.
chr10	38424650	.	CAA	C	6493.24	PASS	AB=0.875;AC=31;AF=0.554;AN=56;BaseQRankSum=-3.874;DP=626;FS=11.874;HRun=13;HaplotypeScore=89.9622;InbreedingCoeff=0.9145;MQ=65.34;MQ0=7;MQRankSum=-0.932;QD=18.71;ReadPosRankSum=7.422;VQSLOD=2.5097;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,18:23:39.31:402,39,0	1/1:1,10:11:14.83:221,15,0	0/0:20,0:11:8.08:0,8,137	0/1:18,1:15:24.10:24,0,109	1/1:4,21:27:50.53:527,51,0	0/0:22,0:23:56.16:0,56,755	0/0:24,0:28:53.66:0,54,716	0/0:13,0:29:60.11:0,60,622	1/1:5,20:26:62.81:594,63,0	1/1:5,19:26:62.55:576,63,0	1/1:2,9:12:23.73:216,24,0	1/1:6,16:22:44.79:419,45,0	1/1:5,17:22:51.04:495,51,0	1/1:5,15:20:23.93:282,24,0	1/1:4,18:25:54.99:499,55,0	1/1:3,17:20:42:457,42,0	1/1:4,18:23:50.65:477,51,0	1/1:6,17:25:48.67:450,49,0	0/0:8,0:17:44.57:0,45,451	0/0:12,0:30:60.10:0,60,627	0/0:11,0:18:27.04:0,27,281	0/0:7,0:26:60.05:0,60,590	1/1:3,12:15:29.54:290,30,0	1/1:3,22:26:59.80:565,60,0	0/0:5,0:19:42.08:0,42,445	0/0:16,0:29:69.09:0,69,781	0/0:7,0:22:36.05:0,36,346	0/0:3,0:11:21.04:0,21,215
chr10	38425253	.	C	CA	1941.99	PASS	AB=0.727;AC=17;AF=0.327;AN=52;BaseQRankSum=2.418;DP=483;FS=4.016;HRun=8;HaplotypeScore=99.2733;InbreedingCoeff=0.8750;MQ=44.05;MQ0=44;MQRankSum=-3.689;QD=11.99;ReadPosRankSum=-1.589;VQSLOD=2.8312;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:30:41.18:0,41,412	0/0:13,0:10:27.01:0,27,247	./.	./.	0/0:30,0:28:47.92:0,48,429	0/0:10,0:10:17.99:0,18,165	0/0:17,0:16:23.97:0,24,217	1/1:10,7:13:21.05:226,21,0	0/0:14,0:11:17.99:0,18,160	0/0:32,0:28:62.70:0,63,553	0/0:19,0:17:38.91:0,39,340	0/0:10,0:10:14.47:0,14,128	0/0:12,0:12:20.81:0,21,176	0/0:17,0:15:20.75:0,21,171	0/0:15,0:15:20.60:0,21,184	0/0:17,0:14:23.98:0,24,215	0/0:38,0:30:58.76:0,59,519	0/0:14,0:10:17.53:0,18,160	1/1:8,6:13:18.05:208,18,0	1/1:14,10:21:31.88:289,32,0	1/1:8,4:8:3.01:35,3,0	0/1:10,6:14:0.36:246,0,0	0/0:14,0:14:20.96:0,21,183	0/0:15,0:13:14.67:0,15,137	1/1:11,8:19:30.06:323,30,0	1/1:11,7:16:2.55:254,3,0	1/1:15,11:25:39.04:399,39,0	1/1:10,6:11:15.02:152,15,0
chr10	38425813	.	C	CA	6240.76	PASS	AC=24;AF=0.480;AN=50;BaseQRankSum=-10.568;DP=584;FS=27.900;HRun=5;HaplotypeScore=63.8286;InbreedingCoeff=0.9599;MQ=65.67;MQ0=1;MQRankSum=0.298;QD=25.47;ReadPosRankSum=4.285;VQSLOD=3.0580;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,27:29:51.17:668,51,0	1/1:0,9:9:12.04:158,12,0	0/0:16,0:15:32.99:0,33,314	0/0:16,0:12:32.09:0,32,263	1/1:4,18:22:44.92:493,45,0	0/0:38,0:38:99:0,99,1023	0/0:25,0:25:56.97:0,57,567	0/0:31,0:31:57.05:0,57,561	1/1:5,14:19:36.09:445,36,0	./.	./.	1/1:2,20:22:51.17:670,51,0	1/1:3,24:27:53.62:683,54,0	1/1:1,22:23:48.16:631,48,0	1/1:1,19:20:36.94:509,37,0	1/1:3,20:23:51.17:669,51,0	1/1:1,15:16:36.12:468,36,0	./.	0/0:22,0:21:54.08:0,54,542	0/0:32,0:32:81.04:0,81,824	0/0:36,0:36:95.91:0,96,965	0/0:25,0:25:63.03:0,63,619	1/1:3,16:19:29.82:486,30,0	1/1:2,14:16:1.08:362,1,0	0/0:18,0:18:51.07:0,51,516	0/0:24,0:24:66.12:0,66,678	0/0:33,0:33:86.53:0,87,836	0/0:21,0:21:57.04:0,57,566
chr10	38425818	.	A	AG	1772.47	PASS	AB=1.000;AC=19;AF=0.380;AN=50;BaseQRankSum=13.820;DP=591;FS=19.242;HRun=9;HaplotypeScore=77.6337;InbreedingCoeff=0.5790;MQ=66.16;MQ0=1;MQRankSum=2.354;QD=7.29;ReadPosRankSum=4.561;VQSLOD=0.3225;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:31,0:31:29.44:243,29,0	0/1:11,0:11:28.44:35,0,28	0/0:15,0:14:17.96:0,18,152	0/0:16,0:11:14.98:0,15,130	0/1:20,0:20:24.46:102,0,24	0/0:37,0:37:95.84:0,96,815	0/0:23,0:23:50.93:0,51,432	0/0:33,0:32:35.89:0,36,371	1/1:16,0:17:13.23:146,13,0	./.	./.	1/1:21,0:21:47.59:233,48,0	1/1:24,0:24:47.21:231,47,0	1/1:22,0:22:45.06:226,45,0	0/1:22,0:22:7.21:127,0,7	1/1:20,1:21:47.68:242,48,0	1/1:15,0:15:13.34:148,13,0	./.	0/0:23,0:22:44.80:0,45,372	0/0:32,3:35:74.84:0,75,680	0/0:37,0:37:82.57:0,83,699	0/0:26,0:27:58.87:0,59,473	0/1:22,0:22:45.75:127,0,46	0/1:17,0:17:31.43:102,0,31	0/0:17,0:17:47.99:0,48,416	0/0:26,0:26:56.96:0,57,488	0/0:32,0:32:65.21:0,65,544	0/0:25,0:25:55.92:0,56,464
chr10	38426266	.	T	TAGG	25415.27	PASS	AC=44;AF=0.846;AN=52;BaseQRankSum=-11.616;DP=534;FS=8.560;HRun=0;HaplotypeScore=70.6059;InbreedingCoeff=0.9495;MQ=91.88;MQ0=0;MQRankSum=-8.881;QD=56.86;ReadPosRankSum=6.204;VQSLOD=6.9181;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:3,15:18:39.13:896,39,0	1/1:0,9:9:24.08:552,24,0	0/0:22,0:22:59.98:0,60,912	0/0:24,0:24:66.91:0,67,1029	1/1:1,35:36:93.28:2086,93,0	0/0:27,0:27:72.24:0,72,1196	0/0:14,0:14:42.14:0,42,716	1/1:4,16:22:60.13:1190,60,0	1/1:0,16:16:33.11:760,33,0	1/1:0,1:1:3.01:69,3,0	./.	1/1:1,16:17:45.15:1038,45,0	1/1:1,19:20:57.20:1311,57,0	1/1:2,16:19:51.18:1160,51,0	1/1:1,15:16:42.14:967,42,0	1/1:1,15:16:42.14:968,42,0	1/1:1,18:18:54.19:1234,54,0	./.	1/1:1,19:20:57.17:1205,57,0	1/1:2,22:24:57.15:1261,57,0	1/1:1,15:16:39.13:899,39,0	1/1:3,18:23:57.15:1262,57,0	1/1:1,32:33:84.29:1936,84,0	1/1:1,10:12:17.83:412,18,0	1/1:2,27:30:66.23:1521,66,0	1/1:3,24:27:81.26:1784,81,0	1/1:3,31:36:81.28:1866,81,0	1/1:0,17:17:45.15:1037,45,0
chr10	38426344	.	G	GA	498.87	PASS	AC=2;AF=0.040;AN=50;BaseQRankSum=-1.852;DP=539;FS=3.105;HRun=9;HaplotypeScore=72.5180;InbreedingCoeff=0.9309;MQ=81.67;MQ0=1;MQRankSum=-4.407;QD=17.82;ReadPosRankSum=1.263;VQSLOD=4.0664;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,18:28:52.52:593,53,0	0/0:11,0:11:29.99:0,30,260	0/0:24,0:24:46.84:0,47,403	0/0:20,0:19:29.55:0,30,238	0/0:37,0:37:95.96:0,96,833	0/0:29,0:29:68.97:0,69,599	0/0:13,0:13:35.99:0,36,313	0/0:35,0:35:86.95:0,87,747	0/0:16,1:17:8.80:0,9,305	./.	./.	0/0:6,0:6:18:0,18,156	0/0:18,0:18:50.99:0,51,442	0/0:21,0:21:47.98:0,48,417	0/0:17,0:17:38.97:0,39,339	0/0:22,0:22:59.98:0,60,521	0/0:22,0:22:62.99:0,63,547	./.	0/0:23,0:22:53.96:0,54,469	0/0:36,0:36:99:0,102,885	0/0:13,0:13:29.98:0,30,260	0/0:30,0:30:77.93:0,78,669	0/0:18,0:18:47.99:0,48,415	0/0:11,0:11:23.98:0,24,208	0/0:24,0:24:53.96:0,54,469	0/0:27,1:28:47.80:0,48,644	0/0:22,0:22:53.97:0,54,469	0/0:14,0:14:26.98:0,27,234
chr10	38426455	.	T	TAGAC	6287.54	PASS	AB=1.000;AC=30;AF=0.600;AN=50;BaseQRankSum=-11.648;DP=556;FS=0.431;HRun=0;HaplotypeScore=114.6660;InbreedingCoeff=0.1027;MQ=60.88;MQ0=2;MQRankSum=-0.237;QD=13.46;ReadPosRankSum=-3.316;VQSLOD=3.9003;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:12,1:26:3.01:52,3,0	0/0:13,0:13:20.25:0,20,172	0/0:22,0:17:31.96:0,32,324	0/0:13,0:12:24.06:0,24,257	0/1:47,0:47:18.26:18,0,498	0/0:24,0:24:48.09:0,48,663	0/0:15,0:15:27.06:0,27,394	1/1:39,0:38:75.03:688,75,0	0/1:16,0:16:13.02:13,0,213	./.	./.	0/1:11,0:11:31.99:32,0,65	0/1:18,0:18:47.96:48,0,273	0/1:8,0:8:43.60:58,0,44	0/1:20,0:20:99:128,0,140	0/1:14,0:14:41.01:41,0,163	0/1:29,0:29:19.73:20,0,328	./.	1/1:7,8:15:24.05:488,24,0	1/1:10,30:39:60.21:1409,60,0	1/1:1,3:4:6.02:146,6,0	1/1:7,11:19:6.02:146,6,0	0/1:32,0:32:94.47:94,0,253	0/1:16,0:16:32.66:79,0,33	1/1:5,24:32:18.06:439,18,0	1/1:18,9:27:5.03:998,5,0	1/1:10,18:27:30.10:730,30,0	1/1:3,22:25:27.09:658,27,0
chr10	38427064	.	CAA	C	2400.45	PASS	AC=16;AF=0.320;AN=50;BaseQRankSum=-6.817;DP=443;FS=20.458;HRun=13;HaplotypeScore=85.4342;InbreedingCoeff=0.9412;MQ=79.17;MQ0=3;MQRankSum=0.597;QD=16.90;ReadPosRankSum=4.362;VQSLOD=0.9432;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:18:17.48:0,17,64	1/1:2,3:7:5.91:100,6,0	0/0:40,0:14:19.63:0,20,154	0/0:29,0:22:22.46:0,22,196	1/1:7,32:43:63.83:814,64,0	0/0:4,0:12:24.05:0,24,243	0/0:1,0:10:24.04:0,24,238	0/0:15,0:25:53.74:0,54,547	1/1:5,9:15:4.39:219,4,0	./.	./.	0/0:11,0:11:23.67:0,24,312	1/1:3,8:11:21:204,21,0	1/1:3,14:17:33.04:320,33,0	1/1:1,11:13:26.71:294,27,0	1/1:3,14:18:35.79:332,36,0	1/1:1,13:18:17.61:308,18,0	./.	0/0:5,0:14:30.51:0,31,307	0/0:5,0:19:53.59:0,54,520	0/0:0,0:7:12.02:0,12,115	0/0:3,0:11:26.85:0,27,254	0/0:9,0:9:24.08:0,24,347	0/0:6,0:8:18.06:0,18,246	0/0:3,0:24:51.09:0,51,510	0/0:3,0:21:60.10:0,60,588	0/0:13,0:29:45.10:0,45,484	0/0:1,0:13:22.28:0,22,204
chr10	38427345	.	C	CA	2482.28	PASS	AB=0.778;AC=18;AF=0.360;AN=50;BaseQRankSum=-10.016;DP=523;FS=5.448;HRun=13;HaplotypeScore=86.1846;InbreedingCoeff=0.4948;MQ=67.92;MQ0=0;MQRankSum=0.557;QD=9.77;ReadPosRankSum=-4.096;VQSLOD=2.0794;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:43:65.15:0,65,191	0/1:3,0:6:8.57:9,0,9	0/1:12,1:12:10.89:27,0,11	0/0:9,0:10:10.02:0,10,41	0/0:8,0:30:39.59:0,40,142	0/0:13,0:14:28.77:0,29,191	0/0:13,0:14:18.83:0,19,114	1/1:14,17:31:42.30:371,42,0	0/0:7,0:16:17.18:0,17,62	./.	./.	0/1:10,3:13:11.86:12,0,69	0/0:8,0:23:28.44:0,28,82	0/0:5,0:15:3.05:0,3,27	0/0:1,0:16:23.35:0,23,79	0/0:3,0:30:44.78:0,45,129	0/0:5,0:26:36.64:0,37,106	./.	0/1:12,13:28:15.97:319,0,16	0/1:9,12:21:5.30:208,0,5	1/1:7,17:24:27.50:251,28,0	1/1:4,19:23:24.37:352,24,0	0/0:16,0:19:29.52:0,30,181	0/0:13,0:13:17.71:0,18,123	1/1:5,14:20:23.86:206,24,0	1/1:12,22:34:24.17:483,24,0	1/1:9,15:24:10.72:234,11,0	0/1:8,9:17:12.81:192,0,13
chr10	38429414	.	A	AGT	3183	PASS	AB=0.821;AC=19;AF=0.365;AN=52;BaseQRankSum=-2.961;DP=480;FS=3.496;HRun=0;HaplotypeScore=102.2972;InbreedingCoeff=0.7656;MQ=67.78;MQ0=23;MQRankSum=-0.237;QD=16.75;ReadPosRankSum=-0.652;VQSLOD=3.2011;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:24:8.74:9,0,76	0/0:4,0:4:8.86:0,9,83	0/0:21,0:11:18.05:0,18,216	0/0:18,0:12:24.77:0,25,184	0/0:19,0:18:26.99:0,27,312	0/0:13,0:11:24.08:0,24,324	0/0:27,0:27:72.17:0,72,913	1/1:6,16:20:32.84:323,33,0	0/0:16,0:16:20.99:0,21,241	0/1:17,0:16:27.86:28,0,53	./.	0/0:17,0:15:22.70:0,23,280	0/0:8,0:8:18.05:0,18,230	0/0:11,0:10:18.04:0,18,242	0/0:8,0:8:8.98:0,9,87	0/0:8,0:8:21.06:0,21,263	0/0:30,0:30:68.63:0,69,902	0/1:0,0:18:2.87:3,0,6	1/1:2,14:14:39.09:511,39,0	1/1:13,0:11:15.81:168,16,0	./.	1/1:9,0:8:15.04:210,15,0	0/0:12,0:11:21.04:0,21,259	0/0:31,0:31:61.30:0,61,759	1/1:23,0:23:44.96:599,45,0	1/1:1,17:18:48.14:616,48,0	1/1:19,0:19:53.94:561,54,0	1/1:10,0:10:27.08:353,27,0
chr10	38429416	.	T	TGTGC	4608.80	PASS	AB=1.000;AC=20;AF=0.385;AN=52;BaseQRankSum=-4.093;DP=486;FS=0.945;HRun=0;HaplotypeScore=110.1058;InbreedingCoeff=0.8110;MQ=62.89;MQ0=24;MQRankSum=-1.958;QD=24.51;ReadPosRankSum=-0.970;VQSLOD=4.4394;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:24:29.42:103,0,29	0/0:4,0:4:8.86:0,9,101	0/0:18,0:8:18.05:0,18,302	0/0:18,0:11:25.45:0,25,247	0/0:18,0:17:26.99:0,27,300	0/0:12,0:10:24.08:0,24,459	0/0:28,0:28:71.82:0,72,1293	1/1:19,0:16:32.43:404,32,0	0/0:15,0:15:20.99:0,21,263	0/1:17,0:16:2.89:160,0,3	./.	0/0:20,0:18:11.16:0,11,273	0/0:8,0:8:18.06:0,18,230	0/0:12,0:11:18.06:0,18,223	0/0:8,0:8:8.98:0,9,86	0/0:9,0:9:21.05:0,21,255	0/0:29,0:29:68.87:0,69,845	1/1:18,0:18:5.88:55,6,0	1/1:17,0:15:41.77:646,42,0	1/1:15,0:13:15.63:233,16,0	./.	1/1:9,0:8:15.04:294,15,0	0/0:14,0:13:12.51:0,13,262	0/0:34,0:34:56.19:0,56,665	1/1:22,0:22:45.33:681,45,0	1/1:17,0:17:47.98:766,48,0	1/1:19,0:19:53.93:750,54,0	1/1:10,0:10:27.09:515,27,0
chr10	38429421	.	GCACACACA	G	1221.15	PASS	AC=20;AF=0.455;AN=44;BaseQRankSum=3.492;DP=499;FS=9.450;HRun=0;HaplotypeScore=142.4926;InbreedingCoeff=0.6273;MQ=56.39;MQ0=26;MQRankSum=-4.607;QD=8.20;ReadPosRankSum=2.152;VQSLOD=2.2162;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:32:18.02:0,18,477	1/1:2,2:4:6.02:149,6,0	./.	./.	./.	0/0:12,0:12:15.05:0,15,497	0/0:25,0:27:30.56:0,31,828	0/0:19,0:16:1.77:0,2,4	1/1:6,11:17:5.48:148,5,0	0/0:18,0:17:27.09:0,27,748	./.	0/0:25,0:22:14.04:0,14,345	1/1:8,0:8:3.01:64,3,0	1/1:10,4:13:2.89:74,3,0	0/0:5,3:8:0.47:0,0,1	1/1:7,3:10:3.01:74,3,0	1/1:27,2:30:10.84:263,11,0	0/0:22,0:22:21.05:0,21,642	1/1:16,0:14:2.08:21,2,0	0/0:14,1:13:0:0,0,0	./.	./.	0/0:13,0:12:9.50:0,10,290	0/0:28,0:34:17.49:0,17,526	1/1:19,0:22:3.01:56,3,0	0/0:17,0:17:1.25:0,1,3	1/1:11,7:18:18.06:446,18,0	1/1:8,2:10:3.01:74,3,0
chr10	38430000	.	TACCCAGGCTGCCCTTGACTCCCTCTATA	T	1894.86	PASS	AC=4;AF=0.074;AN=54;BaseQRankSum=-0.272;DP=577;FS=9.382;HRun=0;HaplotypeScore=373.0642;InbreedingCoeff=0.9440;MQ=72.10;MQ0=3;MQRankSum=-0.605;QD=44.07;ReadPosRankSum=0.898;VQSLOD=0.4954;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:84.27:0,84,2230	0/0:12,0:12:30.10:0,30,498	0/0:22,0:18:6.42:0,6,420	0/0:23,0:22:24.94:0,25,746	0/0:23,0:23:39.13:0,39,714	0/0:28,0:27:72.25:0,72,2181	0/0:26,0:26:63.22:0,63,1639	0/0:24,0:24:39.13:0,39,1078	0/0:23,0:22:57.19:0,57,1106	0/0:25,0:25:60.21:0,60,1866	0/0:16,0:16:30.10:0,30,919	1/1:15,0:15:39.13:928,39,0	0/0:18,0:18:42.14:0,42,744	0/0:20,0:20:45.15:0,45,802	0/0:13,0:13:33.11:0,33,683	0/0:11,0:10:21.07:0,21,353	0/0:19,0:19:51.16:0,51,1014	0/0:12,0:12:27.09:0,27,823	0/0:17,0:17:42.11:0,42,1103	0/0:25,0:25:69.24:0,69,1713	0/0:32,0:31:78.24:0,78,2164	0/0:15,0:15:33.11:0,33,802	./.	1/1:28,0:26:39.10:1087,39,0	0/0:22,0:22:39.13:0,39,1116	0/0:27,0:27:66.23:0,66,1944	0/0:17,0:17:42.14:0,42,1312	0/0:8,0:8:18.06:0,18,540
chr10	38430827	.	TGACTCTGTCTGTAACCCAGGCTGCCCTC	T	729.73	PASS	AB=1.000;AC=15;AF=0.313;AN=48;BaseQRankSum=4.114;DP=529;FS=5.499;HRun=0;HaplotypeScore=250.2873;InbreedingCoeff=0.6820;MQ=44.47;MQ0=75;MQRankSum=-5.367;QD=6.95;ReadPosRankSum=-0.275;VQSLOD=2.2378;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:8:12.04:0,12,445	0/1:9,0:7:7.97:8,0,141	./.	./.	0/0:14,0:13:6.02:0,6,219	0/0:19,0:19:30.10:0,30,1327	0/0:19,0:18:21.07:0,21,477	1/1:14,0:6:2.99:23,3,0	0/0:25,0:23:33.11:0,33,1318	0/0:13,0:10:8.26:0,8,508	0/0:7,0:4:3.01:0,3,56	0/0:24,0:23:45.14:0,45,1608	0/0:33,0:31:48.04:0,48,1685	0/0:22,0:22:45.15:0,45,1637	0/0:33,0:31:48.16:0,48,1807	0/0:24,0:24:39.12:0,39,1576	0/0:40,0:37:72.17:0,72,2218	0/0:10,0:9:27.08:0,27,811	1/1:10,6:11:15.04:319,15,0	./.	1/1:25,0:19:8.94:142,9,0	./.	0/0:21,0:17:17.25:0,17,446	0/0:37,0:33:60.14:0,60,2212	1/1:7,0:5:3.01:76,3,0	1/1:10,4:13:12.02:181,12,0	1/1:17,0:15:2.80:75,3,0	1/1:3,0:3:3.01:64,3,0
chr10	38431289	.	TGTGTGTGTGTGTGTGTGTGTGTGTGA	T	1171.83	PASS	AB=1.000;AC=10;AF=0.185;AN=54;BaseQRankSum=4.090;DP=451;FS=0.990;HRun=0;HaplotypeScore=206.9460;InbreedingCoeff=0.3956;MQ=51.35;MQ0=26;MQRankSum=-1.499;QD=8.49;ReadPosRankSum=-1.817;VQSLOD=2.6325;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:21,0:18:3.75:4,0,2263	0/0:8,0:8:18.03:0,18,757	./.	0/0:11,0:3:6:0,6,61	0/0:17,0:17:27.09:0,27,1093	0/0:14,0:14:27.07:0,27,625	0/0:11,0:11:23.99:0,24,460	0/0:7,0:4:12.02:0,12,236	0/0:16,0:16:15.44:0,15,455	0/0:16,0:16:47.53:0,48,2453	0/1:9,0:9:0.86:1,0,1160	1/1:4,14:18:16.75:1210,17,0	0/1:12,0:12:10.58:11,0,945	0/0:20,0:19:25.33:0,25,1085	0/0:24,0:21:14.41:0,14,412	0/0:19,0:18:11.77:0,12,634	0/0:26,0:24:13.86:0,14,372	0/1:27,0:27:24.81:25,0,2748	0/0:8,0:8:22.94:0,23,911	0/0:16,0:11:24.07:0,24,1536	0/0:25,0:25:55.42:0,55,3819	0/0:9,0:9:19.29:0,19,1234	1/1:1,14:15:0.81:2,1,0	1/1:10,26:34:3.48:44,3,0	0/0:17,0:17:27.08:0,27,1333	0/0:19,0:14:36.11:0,36,2111	0/0:13,0:12:39.11:0,39,2251	0/0:10,0:9:27.07:0,27,1350
chr10	38431301	.	TGTGTGTGTGTGTGA	T	1639.38	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=4.124;DP=427;FS=6.131;HRun=0;HaplotypeScore=120.8003;InbreedingCoeff=0.1663;MQ=54.47;MQ0=24;MQRankSum=-0.252;QD=6.43;ReadPosRankSum=0.534;VQSLOD=1.8765;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:20,0:18:91.74:92,0,556	0/1:6,0:6:12.49:70,0,12	0/0:15,0:6:15.46:0,15,142	0/0:12,0:3:8.99:0,9,78	1/1:4,8:12:2.75:127,3,0	0/0:11,0:11:29.94:0,30,243	0/0:13,0:13:32.99:0,33,293	0/0:10,0:7:21.02:0,21,197	0/1:15,0:15:33.40:132,0,33	0/1:13,0:13:99:101,0,395	0/1:6,0:6:12.34:12,0,182	1/1:15,0:15:17.42:594,17,0	1/1:9,0:9:14.78:209,15,0	0/1:23,0:22:19.03:64,0,19	0/1:24,0:21:18.82:64,0,19	0/1:17,0:17:10.18:10,0,127	1/1:26,0:25:4.36:138,4,0	0/1:26,0:26:99:192,0,559	0/0:7,0:7:19.59:0,20,489	0/0:13,0:9:21.04:0,21,700	0/0:25,0:25:57.92:0,58,1736	0/0:8,0:8:18.92:0,19,603	0/1:14,0:14:0.17:0,0,0	0/1:29,0:27:0:0,0,0	0/0:17,0:17:27.02:0,27,618	0/0:17,0:12:32.95:0,33,957	0/0:13,0:12:34.30:0,34,1057	0/0:11,0:10:26.99:0,27,512
chr10	38431303	.	TGTGTGTGTGTGA	T	2053.03	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=2.651;DP=416;FS=2.885;HRun=0;HaplotypeScore=106.2620;InbreedingCoeff=0.4278;MQ=56.04;MQ0=23;MQRankSum=0.280;QD=8.63;ReadPosRankSum=0.679;VQSLOD=2.1927;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:20:99:158,0,294	1/1:4,0:4:9:100,9,0	0/0:15,0:6:14.99:0,15,142	0/0:14,0:5:5.16:0,5,72	1/1:8,0:8:2.91:95,3,0	0/0:12,0:12:32.94:0,33,270	0/0:13,0:13:32.99:0,33,303	0/0:11,0:8:24.03:0,24,226	1/1:2,12:14:6.02:229,6,0	0/1:13,0:13:99:152,0,227	0/1:6,0:6:37.39:37,0,47	1/1:15,0:15:17.62:510,18,0	1/1:5,0:5:12.02:236,12,0	1/1:5,11:16:2.59:114,3,0	1/1:6,18:21:3.01:114,3,0	0/1:17,0:17:10.19:10,0,78	1/1:3,21:23:4.42:226,4,0	0/1:27,0:27:99:247,0,267	0/0:8,0:8:22.28:0,22,466	0/0:13,0:9:18.03:0,18,550	0/0:26,0:26:60.87:0,61,1503	0/0:9,0:9:21.90:0,22,529	0/1:14,0:14:0.40:1,0,0	0/1:29,0:27:0:0,0,0	0/0:17,0:17:27.02:0,27,547	0/0:16,0:11:32.95:0,33,818	0/0:14,0:13:37.30:0,37,905	0/0:10,0:9:26.99:0,27,403
chr10	38431309	.	TGTGTGA	T	2043.76	PASS	AB=1.000;AC=27;AF=0.482;AN=56;BaseQRankSum=3.180;DP=397;FS=6.550;HRun=0;HaplotypeScore=75.6077;InbreedingCoeff=0.7518;MQ=58.03;MQ0=19;MQRankSum=1.623;QD=9.33;ReadPosRankSum=3.845;VQSLOD=0.9248;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:16:44.88:359,45,0	1/1:3,0:3:8.99:75,9,0	0/0:17,0:8:21.01:0,21,219	0/0:15,0:6:8.17:0,8,101	1/1:8,0:8:2.91:53,3,0	0/0:14,0:14:38.94:0,39,320	0/0:14,0:14:35.92:0,36,299	0/0:12,0:11:33.01:0,33,304	1/1:12,0:12:6.02:109,6,0	0/1:13,0:13:3.06:314,0,3	1/1:6,0:6:17.98:149,18,0	1/1:15,0:15:15.18:267,15,0	1/1:5,0:5:11.99:114,12,0	1/1:12,0:12:2.88:54,3,0	1/1:21,0:18:3.01:54,3,0	1/1:2,17:19:5.59:91,6,0	1/1:23,0:22:5.34:108,5,0	1/1:21,0:21:56.80:491,57,0	0/0:11,0:11:29.74:0,30,303	0/0:12,0:8:18.02:0,18,305	0/0:24,0:24:62.96:0,63,849	0/0:7,0:7:15.47:0,15,288	0/1:14,0:14:0.22:0,0,0	0/1:29,0:27:0:0,0,0	0/0:17,0:17:30.01:0,30,352	0/0:14,0:11:32.86:0,33,399	0/0:13,0:12:33.01:0,33,482	0/0:8,0:7:13.85:0,14,115
chr10	38431502	.	CT	C	3569.39	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=12.084;DP=525;FS=0.370;HRun=9;HaplotypeScore=64.4580;InbreedingCoeff=0.9691;MQ=69.63;MQ0=0;MQRankSum=1.358;QD=23.33;ReadPosRankSum=4.482;VQSLOD=4.2662;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:96.26:0,96,1087	1/1:1,2:3:6:55,6,0	0/0:12,0:10:21.06:0,21,237	0/0:11,0:11:8.03:0,8,233	1/1:2,32:34:87.03:796,87,0	0/0:19,0:20:57:0,57,638	0/0:21,0:21:60.17:0,60,682	0/0:25,0:25:63.17:0,63,711	1/1:0,14:14:39.02:357,39,0	0/0:18,0:18:51.15:0,51,588	0/0:11,0:11:27.06:0,27,295	0/0:15,0:15:42.12:0,42,485	1/1:2,16:18:45.02:412,45,0	1/1:1,17:18:42.02:384,42,0	1/1:1,17:18:45.02:412,45,0	1/1:2,20:22:57.02:522,57,0	1/1:2,24:26:69.03:632,69,0	0/0:18,0:18:51.15:0,51,589	0/0:22,0:22:57.17:0,57,658	0/0:21,1:22:38.71:0,39,677	0/0:21,0:22:63.02:0,63,707	0/0:15,0:15:30.08:0,30,338	0/0:23,0:23:66.19:0,66,753	0/0:14,0:14:39.12:0,39,450	0/0:16,0:16:48.14:0,48,554	0/0:19,0:19:48.13:0,48,546	0/0:24,0:24:57.14:0,57,645	0/0:8,0:8:24.05:0,24,265
chr10	38432634	.	C	CT	6403.63	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-13.799;DP=716;FS=11.722;HRun=9;HaplotypeScore=70.4830;InbreedingCoeff=0.9977;MQ=81.99;MQ0=0;MQRankSum=-1.604;QD=25.82;ReadPosRankSum=-0.977;VQSLOD=4.4540;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,105,905	0/0:8,0:8:24:0,24,208	0/0:30,0:30:53.40:0,53,439	0/0:14,0:14:17.81:0,18,142	0/0:28,0:29:76.98:0,77,652	0/0:33,0:33:77.98:0,78,677	0/0:19,0:19:44.98:0,45,391	1/1:7,24:31:69.19:763,69,0	0/0:13,0:13:29.27:0,29,259	0/0:29,0:29:74.97:0,75,651	0/0:26,0:26:68.67:0,69,598	0/0:17,0:17:38.96:0,39,335	0/0:28,0:28:68.98:0,69,599	0/0:18,0:18:53.97:0,54,465	0/0:32,0:32:89.92:0,90,770	0/0:26,0:26:68.97:0,69,595	0/0:35,0:35:92.98:0,93,807	0/0:17,0:17:44.98:0,45,391	1/1:10,18:28:57.09:599,57,0	1/1:5,23:28:63.09:670,63,0	1/1:3,14:18:35.93:379,36,0	1/1:4,23:27:40.08:657,40,0	0/0:24,0:25:58.99:0,59,501	0/0:27,0:27:68.98:0,69,599	1/1:1,19:20:54.15:597,54,0	1/1:1,31:34:93.01:976,93,0	1/1:4,39:43:99:1292,117,0	1/1:3,16:19:22.07:470,22,0
chr10	38433043	.	GGCGC	G	4327.38	PASS	AB=0.957;AC=32;AF=0.571;AN=56;BaseQRankSum=-5.720;DP=390;FS=16.355;HRun=0;HaplotypeScore=99.8362;InbreedingCoeff=0.1578;MQ=77.28;MQ0=0;MQRankSum=-0.755;QD=16.15;ReadPosRankSum=0.768;VQSLOD=3.5338;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:25:1.25:356,1,0	1/1:3,0:3:1.73:5,2,0	0/0:26,0:20:47.57:0,48,654	0/0:15,0:10:26.94:0,27,349	0/0:9,0:9:0.47:0,0,1	0/0:24,0:24:45.15:0,45,880	0/0:27,0:28:75.83:0,76,1328	1/1:1,11:12:33.11:544,33,0	0/1:7,0:7:3.27:3,0,48	0/1:3,9:12:0.70:310,0,1	0/1:12,0:12:7.04:290,0,7	1/1:11,0:10:1.62:10,2,0	0/0:9,0:9:4.59:0,5,106	1/1:9,0:9:0.21:1,0,0	0/0:11,0:10:5.52:0,6,39	1/1:8,0:8:5.97:20,6,0	1/1:12,0:12:2.47:8,2,0	0/1:30,0:30:99:676,0,102	0/1:6,0:5:18.67:117,0,19	1/1:11,0:11:4.26:231,4,0	1/1:24,0:23:16.19:442,16,0	1/1:14,0:13:10.29:369,10,0	0/1:12,0:11:9.27:9,0,35	0/1:20,0:20:7.36:7,0,61	0/1:11,0:11:4.09:276,0,4	0/1:12,0:12:71.44:147,0,71	1/1:8,0:8:21.01:288,21,0	0/1:8,0:8:23.88:217,0,24
chr10	38433048	.	G	GCA	1749.69	PASS	AB=0.957;AC=49;AF=0.942;AN=52;BaseQRankSum=0.375;DP=486;FS=3.702;HRun=0;HaplotypeScore=159.9768;InbreedingCoeff=0.0224;MQ=61.94;MQ0=3;MQRankSum=0.681;QD=3.91;ReadPosRankSum=-0.494;VQSLOD=2.8914;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:34,0:33:6.27:66,6,0	1/1:4,0:4:2.99:24,3,0	./.	./.	1/1:11,0:11:2.98:23,3,0	1/1:12,12:25:18.05:251,18,0	0/1:21,4:27:85.44:212,0,85	1/1:17,0:17:13.74:79,14,0	0/1:6,0:6:0:0,0,0	1/1:16,0:16:14.96:133,15,0	1/1:13,0:13:6:65,6,0	1/1:17,0:15:7.21:30,7,0	0/1:13,0:13:3.16:41,0,3	1/1:16,0:15:5.99:49,6,0	1/1:18,0:17:6.45:61,6,0	1/1:15,0:15:5.21:31,5,0	1/1:16,0:15:6.02:69,6,0	1/1:30,0:30:27.09:217,27,0	1/1:9,0:8:8.64:57,9,0	1/1:13,0:12:3:25,3,0	1/1:34,0:33:0.47:1,0,0	1/1:18,0:17:2.32:46,2,0	1/1:16,0:15:2.92:41,3,0	1/1:28,0:28:5.89:48,6,0	1/1:17,0:15:8.74:75,9,0	1/1:15,0:15:12.44:106,12,0	1/1:9,0:8:3.01:37,3,0	1/1:11,0:11:8.46:52,8,0
chr10	38433467	.	AG	A	5468.51	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=7.664;DP=546;FS=1.523;HRun=6;HaplotypeScore=62.5260;InbreedingCoeff=0.9997;MQ=85.60;MQ0=1;MQRankSum=-0.438;QD=28.04;ReadPosRankSum=4.095;VQSLOD=5.4775;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:66.14:0,66,829	1/1:0,10:10:30.08:322,30,0	0/0:27,0:27:62.98:0,63,742	0/0:19,0:18:47.29:0,47,495	1/1:1,26:27:72.15:762,72,0	0/0:18,0:18:51.14:0,51,641	0/0:19,0:19:51.17:0,51,671	0/0:31,0:31:81.24:0,81,1028	1/1:0,13:13:36.09:387,36,0	0/0:20,0:19:60.19:0,60,785	0/0:14,0:14:42.13:0,42,543	1/1:1,21:22:60.15:644,60,0	1/1:0,20:20:57.14:613,57,0	1/1:0,10:10:30.08:322,30,0	1/1:3,17:20:51.13:548,51,0	1/1:0,10:10:30.08:322,30,0	1/1:1,20:21:42.11:451,42,0	0/0:24,0:24:69.18:0,69,888	0/0:16,0:16:45.12:0,45,562	0/0:13,0:13:33.09:0,33,416	0/0:27,0:27:72.22:0,72,931	0/0:18,0:18:51.17:0,51,669	1/1:2,14:16:33.08:355,33,0	1/1:0,26:26:69.17:742,69,0	0/0:22,0:22:66.18:0,66,836	0/0:28,0:28:81.26:0,81,1065	0/0:20,0:19:57.15:0,57,719	0/0:13,0:13:36.12:0,36,472
chr10	38436110	.	T	TGCACACGTGCGC	212.30	PASS	AB=0.750;AC=5;AF=0.089;AN=56;BaseQRankSum=2.636;DP=724;FS=0.000;HRun=0;HaplotypeScore=272.3710;InbreedingCoeff=0.7705;MQ=63.89;MQ0=12;MQRankSum=-2.086;QD=2.83;ReadPosRankSum=-2.334;VQSLOD=1.7538;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:77.94:0,78,2885	0/0:13,0:13:39.12:0,39,1243	0/0:59,0:13:9.63:0,10,561	0/0:44,0:15:32.05:0,32,578	0/0:12,0:12:30.90:0,31,1092	0/0:20,0:20:57.15:0,57,1801	0/0:38,0:38:99:0,105,3610	0/0:21,0:21:60.21:0,60,1645	0/0:15,0:15:31.66:0,32,1044	0/0:30,0:30:84.26:0,84,2676	0/0:21,0:21:51.18:0,51,1809	1/1:5,13:26:2.93:176,3,0	0/0:22,0:22:50.94:0,51,1811	0/0:18,0:18:39.61:0,40,1389	0/0:22,0:22:55.10:0,55,1986	0/0:22,0:21:47.46:0,47,1510	0/0:31,0:31:85.53:0,86,3054	0/0:24,0:23:53.81:0,54,2304	0/0:11,0:11:30.10:0,30,965	0/0:20,0:20:60.20:0,60,1974	0/0:55,0:55:99:0,159,5542	0/0:20,0:20:53.92:0,54,1880	0/1:14,6:21:0:1,0,0	1/1:13,8:28:6.41:134,6,0	0/0:26,0:25:66.37:0,66,2141	0/0:39,0:39:99:0,117,3678	0/0:25,0:25:72.23:0,72,2339	0/0:11,0:11:30.10:0,30,1021
chr10	38436138	.	TACAC	T	828.91	PASS	AB=0.912;AC=9;AF=0.173;AN=52;BaseQRankSum=6.296;DP=692;FS=10.879;HRun=0;HaplotypeScore=168.6676;InbreedingCoeff=0.4568;MQ=50.22;MQ0=12;MQRankSum=-5.817;QD=5.21;ReadPosRankSum=-1.786;VQSLOD=1.6053;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:26,3:30:6.64:144,7,0	0/0:10,0:10:11.96:0,12,132	./.	./.	0/0:16,0:16:1.05:0,1,21	0/1:20,0:20:7.11:7,0,459	0/0:38,0:38:38.90:0,39,687	0/0:17,0:17:16.41:0,16,194	0/0:16,0:16:8.98:0,9,96	0/1:25,9:36:80.29:418,0,80	1/1:12,5:17:12.50:136,13,0	0/0:18,0:18:14.50:0,15,172	0/0:26,0:26:18.63:0,19,188	0/0:16,0:16:8.97:0,9,87	0/0:19,0:19:0.71:0,1,39	0/1:25,0:24:0.64:1,0,5	0/0:33,0:33:13.01:0,13,156	1/1:14,13:28:11.06:256,11,0	0/0:15,0:14:21.54:0,22,331	0/0:18,0:19:24.59:0,25,373	0/0:60,0:59:36.10:0,36,923	0/0:19,0:22:35.58:0,36,643	0/0:17,0:16:2.42:0,2,48	0/0:27,0:27:12.42:0,12,182	0/0:27,0:26:33.11:0,33,687	0/0:40,0:39:61.72:0,62,1104	0/0:20,0:20:30.10:0,30,685	0/0:11,0:10:9.03:0,9,194
chr10	38437140	.	TG	T	5635.81	PASS	AB=0.683;AC=9;AF=0.161;AN=56;BaseQRankSum=-0.368;DP=1187;FS=0.299;HRun=2;HaplotypeScore=148.7055;InbreedingCoeff=0.0733;MQ=73.31;MQ0=1;MQRankSum=-5.047;QD=15.74;ReadPosRankSum=3.280;VQSLOD=4.9555;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,163,2403	0/1:16,11:27:99:239,0,628	0/0:36,0:33:92.50:0,93,1306	0/0:32,0:29:84.27:0,84,1212	0/1:16,18:34:99:562,0,599	0/0:39,0:38:99:0,117,1753	0/0:56,0:56:99:0,166,2451	0/0:33,0:33:96.32:0,96,1421	0/1:26,30:56:99:964,0,963	0/0:45,0:45:99:0,135,2003	0/0:29,0:29:87.28:0,87,1282	0/0:56,0:56:99:0,169,2495	0/1:17,26:43:99:809,0,638	0/1:32,23:55:99:696,0,1195	1/1:0,31:31:93.20:1168,93,0	0/1:32,19:51:99:515,0,1271	0/1:36,25:61:99:682,0,1421	0/0:53,0:53:99:0,153,2243	0/0:17,0:17:51.17:0,51,761	0/0:22,0:22:63.20:0,63,924	0/0:37,0:37:99:0,111,1663	0/0:43,0:43:99:0,129,1923	0/0:51,0:51:99:0,150,2206	0/0:51,0:51:99:0,150,2210	0/0:43,0:42:99:0,126,1888	0/0:66,0:66:99:0,199,2875	0/0:44,0:43:99:0,129,1931	0/0:22,0:22:66.16:0,66,905
chr10	38438114	.	A	ACCT	13801.22	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-2.973;DP=708;FS=15.641;HRun=0;HaplotypeScore=105.6932;InbreedingCoeff=0.9997;MQ=64.69;MQ0=0;MQRankSum=2.257;QD=54.77;ReadPosRankSum=5.149;VQSLOD=5.8063;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,108,1764	1/1:3,10:13:24.08:536,24,0	0/0:25,0:25:65.58:0,66,986	0/0:21,0:19:48.12:0,48,713	1/1:1,19:20:48.16:1072,48,0	0/0:26,0:26:69.24:0,69,1127	0/0:42,0:42:99:0,120,1926	0/0:28,0:28:75.26:0,75,1224	1/1:2,19:21:60.21:1311,60,0	0/0:26,0:26:75.24:0,75,1163	0/0:23,0:23:69.24:0,69,1126	1/1:4,20:24:60.21:1311,60,0	1/1:0,16:17:38.66:842,39,0	1/1:5,22:27:69.24:1510,69,0	1/1:4,22:26:63.22:1400,63,0	1/1:0,21:21:60.20:1340,60,0	1/1:1,33:32:90.31:2010,90,0	0/0:37,0:37:96.33:0,96,1567	0/0:20,0:20:54.16:0,54,846	0/0:19,0:19:51.17:0,51,833	0/0:50,0:50:99:0,144,2352	0/0:26,0:26:72.18:0,72,1119	1/1:5,16:22:45.15:996,45,0	1/1:3,24:27:66.23:1473,66,0	0/0:19,0:19:51.16:0,51,805	0/0:24,0:24:69.24:0,69,1127	0/0:14,0:14:39.13:0,39,637	0/0:16,0:16:48.16:0,48,783
chr10	38438798	.	TG	T	6304.12	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=16.719;DP=568;FS=16.914;HRun=4;HaplotypeScore=72.1435;InbreedingCoeff=0.9964;MQ=82.14;MQ0=0;MQRankSum=-3.316;QD=29.88;ReadPosRankSum=5.343;VQSLOD=3.2108;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,117,1501	1/1:0,7:7:18.05:213,18,0	0/0:27,0:25:62.83:0,63,681	0/0:17,0:17:37.73:0,38,511	1/1:2,16:18:50.14:563,50,0	0/0:17,0:17:27.25:0,27,618	0/0:18,0:17:54.16:0,54,722	0/0:20,0:20:54.14:0,54,668	1/1:1,21:22:48.15:574,48,0	0/0:19,0:19:50.75:0,51,667	0/0:14,0:14:42.12:0,42,568	1/1:1,20:21:53.96:647,54,0	1/1:3,17:20:48.15:573,48,0	1/1:0,22:22:54.17:646,54,0	1/1:0,19:19:48.15:575,48,0	1/1:0,17:17:45.14:539,45,0	1/1:0,24:24:60.18:718,60,0	0/0:37,0:37:99:0,108,1471	0/0:20,0:20:51:0,51,616	0/0:18,0:18:51.13:0,51,660	0/0:16,0:16:45.14:0,45,612	0/0:24,0:24:66.19:0,66,887	1/1:2,14:16:42.13:502,42,0	1/1:2,23:25:63.19:755,63,0	0/0:16,0:16:48.10:0,48,603	0/0:28,0:28:58.58:0,59,993	0/0:21,0:21:54.13:0,54,694	0/0:5,0:5:15.02:0,15,176
chr10	38439298	.	A	AT	6938.48	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-4.732;DP=607;FS=2.877;HRun=7;HaplotypeScore=61.5720;InbreedingCoeff=0.9777;MQ=78.43;MQ0=0;MQRankSum=-4.852;QD=30.84;ReadPosRankSum=3.142;VQSLOD=5.0897;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:84.11:0,84,801	1/1:1,6:7:18.06:217,18,0	0/0:15,0:15:32.88:0,33,299	0/0:16,0:16:34.80:0,35,296	1/1:4,16:20:45.10:526,45,0	0/0:22,0:23:51.04:0,51,481	0/0:18,0:18:54.07:0,54,515	0/0:30,0:30:66.06:0,66,624	1/1:2,17:19:42.13:507,42,0	0/0:25,0:25:63.09:0,63,604	0/0:25,0:25:63.09:0,63,608	1/1:2,26:28:72.05:869,72,0	1/1:3,10:13:4.12:326,4,0	1/1:1,25:26:75.23:906,75,0	1/1:2,27:29:81.25:978,81,0	1/1:0,21:21:57.17:688,57,0	1/1:3,24:27:69.21:834,69,0	0/0:21,0:21:54.02:0,54,506	0/0:21,0:21:54.06:0,54,514	0/0:29,0:29:78.10:0,78,742	0/0:14,0:14:39.04:0,39,370	0/0:24,0:24:60.09:0,60,578	1/1:1,15:16:39.12:471,39,0	1/1:1,18:19:51.16:616,51,0	0/0:29,0:29:81.09:0,81,770	0/0:22,0:22:57.09:0,57,549	0/0:27,0:27:72.10:0,72,695	0/0:14,0:14:39.06:0,39,376
chr10	38439494	.	T	TC	1408.64	PASS	AB=0.749;AC=13;AF=0.232;AN=56;BaseQRankSum=16.256;DP=767;FS=1.644;HRun=0;HaplotypeScore=226.3722;InbreedingCoeff=0.3553;MQ=67.72;MQ0=0;MQRankSum=-15.754;QD=5.03;ReadPosRankSum=7.813;VQSLOD=2.4437;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,123,1664	0/1:5,3:8:34.32:34,0,38	0/0:33,0:32:87.27:0,87,1191	0/0:25,0:25:65.98:0,66,842	0/1:18,13:31:52.14:52,0,94	0/0:19,0:19:57.19:0,57,797	0/0:34,0:34:99:0,99,1324	0/0:32,0:32:93.31:0,93,1296	0/1:14,14:28:44.86:194,0,45	0/0:32,0:32:96.31:0,96,1316	0/0:15,0:15:45.14:0,45,615	0/1:18,5:23:35.22:60,0,35	1/1:8,19:27:16.98:255,17,0	1/1:18,14:32:12.65:243,13,0	1/1:15,25:40:24.64:399,25,0	0/1:17,18:35:0.82:246,0,1	0/1:16,8:24:67.78:68,0,72	0/0:29,0:29:64.51:0,65,1008	0/0:25,0:25:75.24:0,75,1035	0/0:16,0:16:48.15:0,48,656	0/0:39,0:39:99:0,114,1578	0/0:24,0:24:69.22:0,69,942	0/0:15,3:18:13.45:0,13,98	0/1:29,3:32:11.74:26,0,12	0/0:25,0:25:69.23:0,69,963	0/0:35,0:35:99:0,102,1369	0/0:35,0:35:99:0,105,1449	0/0:10,0:10:30.10:0,30,420
chr10	38439495	.	T	TGTCTGTC	13313.03	PASS	AB=0.738;AC=17;AF=0.304;AN=56;BaseQRankSum=18.565;DP=772;FS=4.303;HRun=0;HaplotypeScore=284.6492;InbreedingCoeff=0.4926;MQ=67.02;MQ0=0;MQRankSum=-16.816;QD=44.23;ReadPosRankSum=6.053;VQSLOD=4.1441;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,123,3115	0/1:5,3:8:20.87:267,0,21	0/0:32,0:31:87.25:0,87,2152	0/0:26,0:26:61.20:0,61,1407	1/1:19,13:32:2.39:984,2,0	0/0:19,0:19:57.16:0,57,1406	0/0:34,0:34:99:0,99,2264	0/0:32,0:32:93.28:0,93,2237	0/1:14,14:28:24.09:1360,0,24	0/0:32,0:32:93.29:0,93,2300	0/0:17,0:17:45.12:0,45,1061	1/1:18,0:23:0.62:1154,1,0	1/1:10,19:29:67.10:1914,67,0	0/1:17,14:31:23.22:1471,0,23	1/1:14,25:39:14.92:2485,15,0	1/1:17,17:35:55.80:1865,56,0	0/1:16,8:24:35.38:987,0,35	0/0:27,0:28:65.43:0,65,1789	0/0:25,0:25:75.24:0,75,1821	0/0:16,0:16:48.13:0,48,1013	0/0:39,0:39:99:0,117,2865	0/0:24,0:24:72.21:0,72,1701	0/1:15,0:18:18.79:307,0,19	1/1:31,0:34:25.83:520,26,0	0/0:25,0:25:75.21:0,75,1757	0/0:34,0:34:99:0,99,2340	0/0:35,0:35:99:0,105,2735	0/0:10,0:10:30.10:0,30,838
chr10	38439508	.	C	CT	8961.42	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=20.455;DP=766;FS=14.675;HRun=5;HaplotypeScore=196.6920;InbreedingCoeff=0.9993;MQ=66.70;MQ0=0;MQRankSum=-18.056;QD=31.33;ReadPosRankSum=-1.642;VQSLOD=1.6800;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,129,1387	1/1:0,7:7:21.07:276,21,0	0/0:31,0:31:47.74:0,48,638	0/0:22,0:22:56.57:0,57,571	1/1:2,29:31:76.30:943,76,0	0/0:21,0:21:54.13:0,54,580	0/0:33,0:33:90.22:0,90,967	0/0:36,0:36:72.15:0,72,755	1/1:4,24:28:72.23:945,72,0	0/0:33,0:33:90.21:0,90,959	0/0:24,0:24:65.94:0,66,700	1/1:0,13:13:39.13:507,39,0	1/1:1,29:30:81.26:1059,81,0	1/1:7,25:32:78.25:1010,78,0	1/1:6,33:39:93.30:1205,93,0	1/1:3,30:33:90.29:1171,90,0	1/1:3,20:23:57.19:748,57,0	0/0:26,0:26:74.89:0,75,774	0/0:25,0:25:63.15:0,63,677	0/0:13,0:13:39.10:0,39,419	0/0:39,0:39:99:0,105,1110	0/0:25,0:25:66.15:0,66,700	1/1:0,15:15:41.12:498,41,0	1/1:5,30:35:50.58:599,51,0	0/0:23,0:23:63.16:0,63,677	0/0:34,0:34:96.24:0,96,1032	0/0:36,0:36:99:0,102,1096	0/0:10,0:10:30.08:0,30,322
chr10	38439703	.	T	TGCG	13174.75	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=17.864;DP=712;FS=2.680;HRun=0;HaplotypeScore=128.9688;InbreedingCoeff=0.9995;MQ=81.46;MQ0=0;MQRankSum=-9.278;QD=48.08;ReadPosRankSum=3.587;VQSLOD=6.9373;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,123,1969	1/1:3,7:11:24.08:532,24,0	0/0:23,0:23:66.21:0,66,1030	0/0:19,0:19:48.10:0,48,732	1/1:3,24:27:45:1012,45,0	0/0:16,0:16:42.13:0,42,689	0/0:25,0:25:75.24:0,75,1239	0/0:37,0:37:96.32:0,96,1614	1/1:3,14:19:45.15:1002,45,0	0/0:34,0:34:99:0,99,1638	0/0:17,0:17:45.15:0,45,767	1/1:6,16:22:54.18:1175,54,0	1/1:6,23:29:75.22:1653,75,0	1/1:6,22:33:63.07:1414,63,0	1/1:1,26:28:66.23:1491,66,0	1/1:4,15:22:48.12:1037,48,0	1/1:8,31:39:99:2195,99,0	0/0:31,0:31:90.31:0,90,1534	0/0:21,0:21:60.21:0,60,1023	0/0:25,0:25:69.21:0,69,1123	0/0:29,0:29:87.30:0,87,1478	0/0:24,0:24:72.06:0,72,1109	1/1:2,12:14:27.09:602,27,0	1/1:3,27:30:50.77:1061,51,0	0/0:20,0:20:60.21:0,60,1020	0/0:32,0:32:93.32:0,93,1583	0/0:33,0:31:99:0,99,1686	0/0:11,0:11:30.09:0,30,484
chr10	38440857	.	GA	G	495.19	PASS	AB=0.926;AC=16;AF=0.296;AN=54;BaseQRankSum=-1.312;DP=584;FS=4.936;HRun=13;HaplotypeScore=101.4967;InbreedingCoeff=0.2537;MQ=39.95;MQ0=58;MQRankSum=-2.594;QD=1.95;ReadPosRankSum=0.903;VQSLOD=0.0937;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:22,7:24:32.60:205,33,0	0/1:7,1:7:12.22:15,0,12	0/0:16,0:2:2.80:0,3,13	./.	0/0:26,1:24:4.32:0,4,103	0/0:16,0:11:8.85:0,9,70	0/0:25,1:24:17.87:0,18,147	0/0:24,0:24:41.88:0,42,371	0/1:16,1:16:13.73:14,0,59	1/1:10,12:20:10.79:214,11,0	1/1:11,3:9:11.46:68,11,0	0/1:24,2:23:11.27:11,0,112	0/1:19,2:18:16.94:17,0,80	0/0:16,0:14:13.59:0,14,73	0/1:24,1:19:0.47:0,0,105	0/1:16,2:15:15.56:16,0,130	0/0:35,0:29:24.41:0,24,155	1/1:8,14:22:10.76:85,11,0	0/0:25,1:22:3.81:0,4,174	0/0:25,0:25:25.14:0,25,179	0/0:13,0:10:2.13:0,2,5	0/0:9,0:7:0:0,0,0	0/1:26,1:27:1.43:1,0,92	0/1:19,1:18:4.68:5,0,73	0/0:21,0:18:19.61:0,20,152	0/0:22,1:20:19.34:0,19,277	0/0:21,0:20:6.12:0,6,165	0/0:14,0:11:12.01:0,12,122
chr10	38440871	.	GAAAAA	G	2835.23	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=11.477;DP=622;FS=0.500;HRun=15;HaplotypeScore=100.3671;InbreedingCoeff=0.8954;MQ=41.67;MQ0=61;MQRankSum=-4.378;QD=12.12;ReadPosRankSum=8.890;VQSLOD=-0.3374;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:36:78.65:0,79,1315	1/1:3,7:9:6.02:96,6,0	0/0:19,0:2:3.01:0,3,40	0/0:25,0:2:1.82:0,2,5	1/1:5,18:21:29.90:345,30,0	0/0:7,0:10:6.02:0,6,103	0/0:12,0:20:18.39:0,18,362	0/0:27,0:27:55.78:0,56,712	1/1:4,13:15:5.99:95,6,0	0/0:30,0:26:61.85:0,62,793	0/0:16,0:12:30.39:0,30,424	1/1:5,19:21:27.51:476,28,0	1/1:5,19:21:26.90:397,27,0	1/1:5,14:16:15.03:209,15,0	1/1:8,17:19:17.99:278,18,0	1/1:8,10:15:18.02:272,18,0	1/1:10,25:28:17.69:281,18,0	0/0:27,0:29:53.38:0,53,734	0/0:20,0:19:46.61:0,47,700	0/0:26,0:26:61.59:0,62,1097	0/0:13,0:10:18.14:0,18,197	0/0:13,0:11:25.54:0,26,274	1/1:7,16:22:29.55:369,30,0	1/1:3,13:14:14.96:230,15,0	0/0:26,0:23:47.75:0,48,650	0/0:26,0:24:63:0,63,956	0/0:17,0:19:45.26:0,45,782	0/0:14,0:12:26.91:0,27,357
chr10	38445035	.	A	AGGGT	15663.46	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-2.515;DP=715;FS=18.187;HRun=0;HaplotypeScore=136.2608;InbreedingCoeff=0.9995;MQ=86.86;MQ0=0;MQRankSum=-10.013;QD=56.96;ReadPosRankSum=2.554;VQSLOD=5.2655;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,114,2097	1/1:2,8:11:24.08:611,24,0	0/0:34,0:34:81.23:0,81,1410	0/0:25,0:25:51.21:0,51,851	1/1:2,24:28:51.13:1284,51,0	0/0:17,0:17:51.17:0,51,938	0/0:31,0:31:90.29:0,90,1623	0/0:22,0:22:57.19:0,57,1015	1/1:7,20:28:69.23:1745,69,0	0/0:16,0:16:42.13:0,42,717	0/0:22,0:22:60.19:0,60,1057	1/1:8,22:30:75.26:1909,75,0	1/1:5,17:23:48.16:1206,48,0	1/1:5,19:24:57.20:1436,57,0	1/1:6,37:44:99:3012,120,0	1/1:4,14:19:42.14:1107,42,0	1/1:6,23:30:63.17:1601,63,0	0/0:28,0:28:66.23:0,66,1215	0/0:27,0:27:78.26:0,78,1391	0/0:22,0:22:60.21:0,60,1098	0/0:40,0:40:99:0,112,1981	0/0:22,0:22:56.17:0,56,1047	1/1:4,11:15:30.10:747,30,0	1/1:4,18:23:39.13:1006,39,0	0/0:26,0:26:75.25:0,75,1344	0/0:24,0:24:63.22:0,63,1160	0/0:34,0:34:99:0,102,1845	0/0:10,0:10:30.10:0,30,552
chr10	38445496	.	GT	G	3473.79	PASS	AB=0.600;AC=21;AF=0.375;AN=56;BaseQRankSum=12.957;DP=480;FS=14.900;HRun=1;HaplotypeScore=62.2613;InbreedingCoeff=0.8858;MQ=74.37;MQ0=3;MQRankSum=-2.097;QD=28.47;ReadPosRankSum=3.452;VQSLOD=2.1737;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:36:96.19:0,96,1351	1/1:0,1:1:3.01:42,3,0	0/0:37,0:32:58.13:0,58,1123	0/0:31,0:28:76.33:0,76,1001	0/1:2,4:6:3:128,0,3	0/0:16,0:16:48.08:0,48,604	0/0:12,0:12:33.08:0,33,441	0/0:36,0:36:99:0,108,1403	1/1:2,13:13:31.35:419,31,0	0/0:13,0:12:39.12:0,39,552	0/0:9,0:9:27.09:0,27,375	1/1:6,0:6:17.85:129,18,0	1/1:0,12:12:24.08:333,24,0	1/1:1,11:11:30.10:417,30,0	1/1:1,12:12:33.11:457,33,0	1/1:0,12:11:30.10:417,30,0	1/1:0,29:28:75.25:1029,75,0	0/0:16,0:16:45.09:0,45,587	0/0:30,0:29:81.13:0,81,1009	0/0:10,0:10:30.09:0,30,420	0/0:25,0:25:70.04:0,70,907	0/0:14,0:14:39.09:0,39,513	1/1:6,0:6:2.11:24,2,0	1/1:10,0:9:10.70:79,11,0	0/0:13,0:13:36.11:0,36,508	0/0:22,0:22:63.13:0,63,794	0/0:12,0:12:36.12:0,36,525	0/0:25,0:25:64.41:0,64,1042
chr10	38445655	.	T	TTTTATTTA	952.13	PASS	AC=18;AF=0.375;AN=48;BaseQRankSum=2.861;DP=288;FS=0.000;HRun=0;HaplotypeScore=70.0431;InbreedingCoeff=0.6843;MQ=65.64;MQ0=1;MQRankSum=-2.749;QD=17.96;ReadPosRankSum=0.155;VQSLOD=2.1758;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:45.15:0,45,1013	1/1:2,0:2:3.01:107,3,0	0/0:8,0:7:3:0,3,26	./.	1/1:4,3:7:6.02:248,6,0	0/0:15,0:15:36.12:0,36,870	0/0:8,0:8:12.04:0,12,308	0/0:43,0:42:56.98:0,57,956	1/1:5,0:5:2.94:18,3,0	0/0:12,0:12:27.09:0,27,618	0/0:7,0:7:12.03:0,12,227	./.	1/1:1,0:1:3:25,3,0	1/1:5,0:5:5.95:58,6,0	1/1:6,0:6:8.94:166,9,0	1/1:2,0:2:3:25,3,0	1/1:10,12:23:12.04:341,12,0	0/0:24,0:24:57.14:0,57,1217	0/0:24,0:24:42.14:0,42,888	0/0:4,0:4:3.01:0,3,77	0/0:5,0:5:3.01:0,3,77	./.	./.	1/1:1,1:2:3.01:124,3,0	0/0:11,0:11:24.08:0,24,569	0/0:14,0:14:15.04:0,15,312	0/0:17,0:17:21.05:0,21,383	0/0:6,0:6:12.04:0,12,275
chr10	38445810	.	ATAT	A	1073.42	PASS	AB=0.865;AC=11;AF=0.204;AN=54;BaseQRankSum=2.364;DP=259;FS=0.000;HRun=0;HaplotypeScore=50.6574;InbreedingCoeff=0.2650;MQ=61.69;MQ0=1;MQRankSum=2.359;QD=8.19;ReadPosRankSum=0.138;VQSLOD=2.3669;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:8,13:21:9.36:228,0,9	0/0:3,0:3:9.03:0,9,119	./.	0/0:4,0:3:3.01:0,3,60	0/0:8,0:8:8.93:0,9,89	0/0:12,0:12:27.09:0,27,525	0/0:1,0:1:3.01:0,3,60	0/1:38,2:40:13.65:14,0,1157	0/0:3,0:3:5.99:0,6,62	1/1:1,5:6:18.06:249,18,0	1/1:1,5:6:8.94:100,9,0	0/0:12,0:12:31.95:0,32,209	0/0:7,0:7:8.99:0,9,77	0/0:5,0:5:5.87:0,6,39	0/0:3,0:3:6.02:0,6,83	0/0:4,0:4:3.01:0,3,42	0/0:17,0:17:24.41:0,24,245	1/1:7,18:25:42.07:581,42,0	0/0:11,0:11:21.05:0,21,381	0/1:3,1:4:35.46:35,0,53	0/0:6,0:6:12.04:0,12,238	0/0:1,0:1:3.01:0,3,60	0/1:7,0:7:12.60:13,0,33	0/0:7,0:7:12.68:0,13,64	0/0:7,0:7:18.06:0,18,357	0/0:4,0:4:12.04:0,12,238	0/0:8,0:8:6.02:0,6,119	0/1:20,1:21:5.36:5,0,617
chr10	38445834	.	T	TCA	449.08	PASS	AB=0.753;AC=4;AF=0.071;AN=56;BaseQRankSum=4.913;DP=278;FS=11.051;HRun=0;HaplotypeScore=54.3950;InbreedingCoeff=-0.1033;MQ=53.51;MQ0=1;MQRankSum=2.388;QD=9.98;ReadPosRankSum=2.617;VQSLOD=1.9439;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:28.17:0,28,283	0/0:3,0:3:8.79:0,9,52	0/0:6,0:5:9.01:0,9,120	0/0:7,0:5:14.96:0,15,186	0/0:4,0:4:6.50:0,7,86	0/0:14,0:14:42.12:0,42,658	0/0:3,0:3:9.03:0,9,146	0/0:42,0:42:99:0,114,1742	0/0:3,0:3:4.46:0,4,20	0/0:7,0:7:20.91:0,21,164	0/0:7,0:7:18:0,18,221	0/1:7,9:16:14.76:320,0,15	0/0:7,0:7:8.04:0,8,68	0/1:9,1:10:16.52:17,0,91	0/0:6,0:6:5.85:0,6,34	0/0:8,0:8:5.94:0,6,44	0/0:19,0:19:30.71:0,31,287	0/0:24,0:23:54.26:0,54,477	0/0:9,0:9:27.09:0,27,440	0/0:3,0:3:9:0,9,120	0/0:5,0:5:12.04:0,12,196	0/0:2,0:2:3.01:0,3,49	0/1:7,3:10:41.25:57,0,41	0/1:5,4:9:20.82:163,0,21	0/0:9,0:9:27.09:0,27,440	0/0:8,0:8:24.07:0,24,369	0/0:3,0:3:9.03:0,9,147	0/0:18,0:18:54.11:0,54,780
chr10	38445835	.	T	TC	205.77	PASS	AB=0.800;AC=5;AF=0.089;AN=56;BaseQRankSum=6.022;DP=281;FS=15.129;HRun=0;HaplotypeScore=51.1022;InbreedingCoeff=-0.1024;MQ=53.68;MQ0=0;MQRankSum=0.857;QD=3.88;ReadPosRankSum=3.998;VQSLOD=1.6758;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:27.53:0,28,221	0/0:4,0:4:7.79:0,8,29	0/0:7,0:6:8.86:0,9,98	0/0:7,0:6:8.25:0,8,159	0/0:4,0:4:8.38:0,8,66	0/0:14,0:14:42.14:0,42,586	0/0:3,0:3:9.03:0,9,126	0/0:43,0:43:99:0,126,1629	0/0:4,0:4:5.09:0,5,19	0/0:8,0:8:20.28:0,20,123	0/0:7,0:7:17.79:0,18,192	0/1:7,9:16:48.42:199,0,48	0/1:9,0:9:3.28:3,0,43	0/1:8,1:9:19.98:20,0,46	0/0:6,0:6:5.19:0,5,20	0/0:7,0:7:2.60:0,3,10	0/0:18,0:18:21.34:0,21,199	0/0:24,0:23:55.30:0,55,419	0/0:9,0:9:27.09:0,27,377	0/0:3,0:3:8.90:0,9,99	0/0:6,0:6:15.03:0,15,191	0/0:2,0:2:6.01:0,6,67	0/1:7,3:10:4.38:4,0,87	0/1:5,4:9:56.95:83,0,57	0/0:9,0:9:27.09:0,27,377	0/0:9,0:9:24.07:0,24,321	0/0:3,0:3:9.03:0,9,126	0/0:15,0:15:45.02:0,45,602
chr10	38445837	.	T	TCA	532.87	PASS	AB=0.930;AC=13;AF=0.232;AN=56;BaseQRankSum=6.612;DP=294;FS=17.080;HRun=0;HaplotypeScore=56.0688;InbreedingCoeff=0.1359;MQ=56.35;MQ0=0;MQRankSum=-0.401;QD=6.83;ReadPosRankSum=3.165;VQSLOD=1.4094;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:27.30:0,27,266	1/1:4,0:4:1.41:3,1,0	0/0:9,0:8:18.03:0,18,243	0/0:8,0:7:17.95:0,18,235	0/0:4,0:4:2.10:0,2,47	0/0:15,0:15:39.13:0,39,632	0/0:3,0:3:9.03:0,9,146	0/0:43,0:43:99:0,129,1994	1/1:5,0:5:1.36:3,1,0	0/0:8,0:8:23.82:0,24,212	0/0:7,0:7:0.99:0,1,169	0/1:16,0:16:15.31:324,0,15	0/1:6,3:9:20.49:55,0,20	0/1:8,1:9:21.08:62,0,21	1/1:6,0:6:0.94:2,1,0	1/1:9,0:9:0.47:1,0,0	0/0:19,0:19:17.27:0,17,146	0/0:24,0:23:50.57:0,51,426	0/0:10,0:10:27.08:0,27,415	0/0:3,0:3:8.99:0,9,118	0/0:8,0:8:21.05:0,21,293	0/0:2,0:2:6.02:0,6,95	0/1:11,0:11:47.31:66,0,47	0/1:9,0:9:45.29:137,0,45	0/0:9,0:9:27.09:0,27,440	0/0:10,0:10:27.09:0,27,433	0/0:3,0:3:9.03:0,9,146	0/0:15,0:15:45.10:0,45,703
chr10	38445838	.	T	TATCATCATC	4182.62	PASS	AB=0.571;AC=21;AF=0.375;AN=56;BaseQRankSum=1.469;DP=308;FS=41.091;HRun=0;HaplotypeScore=81.1607;InbreedingCoeff=0.7885;MQ=57.12;MQ0=0;MQRankSum=-5.367;QD=37.68;ReadPosRankSum=2.868;VQSLOD=1.5910;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:27.09:0,27,598	1/1:0,4:4:9.03:430,9,0	0/0:10,0:9:20.37:0,20,240	0/0:9,0:8:17.66:0,18,270	1/1:1,3:5:6.02:233,6,0	0/0:14,0:14:36.11:0,36,958	0/0:3,0:3:9.03:0,9,238	0/0:43,0:43:99:0,120,2937	1/1:0,5:6:6.02:286,6,0	0/0:8,0:8:24.08:0,24,523	0/0:7,0:7:15.05:0,15,359	1/1:16,0:16:25.77:663,26,0	1/1:6,0:9:21.06:394,21,0	1/1:9,0:10:24.08:436,24,0	1/1:1,6:10:6.02:287,6,0	1/1:1,9:12:3.01:144,3,0	0/1:5,14:20:22.56:600,0,23	0/0:25,0:24:54.15:0,54,1210	0/0:11,0:11:24.07:0,24,626	0/0:4,0:4:9.03:0,9,244	0/0:8,0:8:24.05:0,24,488	0/0:2,0:2:6.02:0,6,143	1/1:11,0:11:24.03:309,24,0	1/1:8,0:8:24.07:401,24,0	0/0:9,0:9:27.09:0,27,789	0/0:10,0:10:30.08:0,30,691	0/0:3,0:3:6.02:0,6,163	0/0:15,0:15:45.15:0,45,1176
chr10	38447543	.	G	GA	5765.60	PASS	AB=0.533;AC=21;AF=0.375;AN=56;BaseQRankSum=-13.331;DP=618;FS=11.838;HRun=9;HaplotypeScore=60.2541;InbreedingCoeff=0.9482;MQ=81.12;MQ0=0;MQRankSum=-1.123;QD=26.21;ReadPosRankSum=1.604;VQSLOD=4.8384;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,1:48:95.73:0,96,1050	1/1:1,10:11:18.05:199,18,0	0/0:25,0:25:24.79:0,25,307	0/0:16,0:15:18.52:0,19,173	1/1:5,30:36:93.04:996,93,0	0/0:26,0:26:43.40:0,43,524	0/0:24,0:24:62.98:0,63,547	0/0:26,0:26:62.96:0,63,542	1/1:3,18:21:48.13:531,48,0	0/0:21,0:21:56.99:0,57,495	0/0:18,1:19:14.79:0,15,357	0/1:1,7:8:1.99:208,0,2	1/1:3,17:20:45.12:498,45,0	1/1:1,15:16:22.08:472,22,0	1/1:2,18:20:45.12:498,45,0	1/1:2,13:15:35.97:398,36,0	1/1:4,30:34:58.17:870,58,0	0/0:18,0:18:50.94:0,51,436	0/0:26,0:26:57.45:0,57,492	0/0:24,0:24:65.97:0,66,573	0/0:24,0:25:41.03:0,41,401	0/0:23,0:23:68.99:0,69,599	1/1:0,14:14:39.11:431,39,0	1/1:3,22:25:40.12:664,40,0	0/0:13,0:13:32.95:0,33,279	0/0:21,0:21:50.98:0,51,443	0/0:28,0:30:70.03:0,70,585	0/0:13,0:13:32.62:0,33,281
chr10	38448320	.	C	CCATCAT	13772.64	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-7.055;DP=965;FS=4.118;HRun=0;HaplotypeScore=199.0418;InbreedingCoeff=0.9870;MQ=58.91;MQ0=2;MQRankSum=-17.334;QD=38.69;ReadPosRankSum=1.835;VQSLOD=4.2827;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:75.16:0,75,1390	1/1:4,7:11:18.06:594,18,0	0/0:53,0:44:71.03:0,71,1315	0/0:30,0:27:39.12:0,39,713	1/1:10,13:26:20.68:663,21,0	0/0:33,0:33:69.21:0,69,1381	0/0:45,0:45:90.29:0,90,1789	0/0:34,0:34:57.18:0,57,1089	1/1:13,21:41:51.17:1619,51,0	0/0:39,0:39:90.31:0,90,1857	0/0:30,0:30:66.18:0,66,1266	1/1:10,32:43:78.27:2504,78,0	1/1:16,17:36:35.76:1130,36,0	1/1:17,25:44:66.23:2152,66,0	1/1:11,30:48:72.19:2185,72,0	1/1:12,18:35:42.08:1290,42,0	1/1:8,10:20:15.05:486,15,0	0/0:24,0:24:57.20:0,57,1179	0/0:24,0:24:42.07:0,42,705	0/0:39,0:39:96.30:0,96,1908	0/0:57,0:57:99:0,138,2821	0/0:37,0:37:75.22:0,75,1468	1/1:13,13:28:25.73:889,26,0	1/1:7,13:23:8.82:261,9,0	0/0:30,0:30:78.24:0,78,1555	0/0:34,0:34:86.74:0,87,1760	0/0:41,0:39:84.28:0,84,1732	0/0:17,0:17:45.15:0,45,934
chr10	38451370	.	AGTAGTAGTTGTTGTTGTT	A	3115.94	PASS	AB=1.000;AC=18;AF=0.333;AN=54;BaseQRankSum=5.119;DP=735;FS=10.416;HRun=0;HaplotypeScore=236.7139;InbreedingCoeff=0.6756;MQ=42.85;MQ0=114;MQRankSum=-3.782;QD=11.89;ReadPosRankSum=2.339;VQSLOD=1.3847;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:35,0:20:39.63:40,0,437	1/1:3,15:18:2.28:124,2,0	0/0:3,0:2:6.02:0,6,204	./.	1/1:3,19:20:12.04:163,12,0	0/0:20,0:19:45.15:0,45,1211	0/0:32,0:22:57.35:0,57,1236	0/0:48,0:20:15.38:0,15,147	1/1:2,16:17:6.02:254,6,0	0/1:37,0:31:99:379,0,628	0/0:15,0:14:14.53:0,15,192	0/0:35,0:22:52.77:0,53,1651	1/1:4,19:19:6.02:255,6,0	1/1:29,0:27:1.04:697,1,0	1/1:3,28:30:8.95:325,9,0	1/1:2,29:29:12.04:491,12,0	1/1:18,0:11:30.02:569,30,0	0/0:15,0:9:18.53:0,19,312	0/0:15,0:7:13.70:0,14,432	0/0:35,0:19:32.81:0,33,764	0/0:36,0:28:26.93:0,27,1282	0/0:14,0:11:28.32:0,28,793	0/0:21,0:16:37.37:0,37,982	0/0:51,0:39:90.31:0,90,2813	0/0:28,0:22:64.10:0,64,1931	0/0:41,0:21:57.34:0,57,1021	0/0:36,0:29:75.26:0,75,1953	0/0:28,0:23:58.70:0,59,1847
chr10	38451376	.	AGTTGTTGTTGTT	A	1819.36	PASS	AB=0.912;AC=18;AF=0.333;AN=54;BaseQRankSum=6.571;DP=723;FS=10.103;HRun=0;HaplotypeScore=193.4994;InbreedingCoeff=0.5406;MQ=42.69;MQ0=107;MQRankSum=-6.239;QD=6.76;ReadPosRankSum=3.802;VQSLOD=1.8332;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:34,0:19:15:65,0,15	1/1:18,0:18:2.09:65,2,0	0/0:4,0:2:6.02:0,6,204	./.	1/1:21,0:19:3.01:51,3,0	0/0:20,0:19:36.10:0,36,908	0/0:32,0:21:34.41:0,34,914	0/0:46,0:21:14.91:0,15,146	1/1:17,0:16:6.02:136,6,0	0/1:16,19:30:4.22:532,0,4	0/0:8,7:14:1.25:0,1,3	0/0:34,0:21:43.74:0,44,1040	1/1:23,0:19:6.02:136,6,0	0/1:27,0:25:20.46:229,0,20	1/1:31,0:30:12.04:210,12,0	1/1:31,0:29:11.97:254,12,0	1/1:18,0:11:15.44:280,15,0	0/1:14,0:8:12.90:37,0,13	0/0:13,0:7:12.04:0,12,245	0/0:33,0:18:30.81:0,31,470	0/0:34,0:26:17.08:0,17,312	0/0:14,0:12:19.29:0,19,305	0/0:24,0:18:40.27:0,40,960	0/0:50,0:38:75.10:0,75,1819	0/0:29,0:23:64.08:0,64,1126	0/0:42,0:22:30.99:0,31,547	0/0:35,0:28:48.08:0,48,704	0/0:29,0:24:45.15:0,45,1084
chr10	38451446	.	ATTCTTCTTCTTAT	A	4382.24	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=14.725;DP=628;FS=3.814;HRun=0;HaplotypeScore=260.7815;InbreedingCoeff=0.8725;MQ=42.43;MQ0=40;MQRankSum=-9.471;QD=30.02;ReadPosRankSum=2.302;VQSLOD=3.8350;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:13:23.60:0,24,548	1/1:7,2:9:3.96:130,4,0	0/0:48,0:6:17.41:0,17,218	0/0:35,0:5:14.72:0,15,278	1/1:13,4:17:24.93:314,25,0	0/0:22,0:21:63.19:0,63,2024	0/0:23,0:16:42.10:0,42,1067	0/0:40,0:31:87.30:0,87,1967	1/1:12,7:19:28.07:714,28,0	0/0:26,0:25:11.32:0,11,931	0/0:12,0:12:4.10:0,4,208	0/0:24,0:19:24.57:0,25,494	1/1:10,4:13:21.78:404,22,0	1/1:9,8:16:0.51:627,1,0	1/1:17,8:25:27.54:673,28,0	1/1:18,13:31:56.60:1193,57,0	1/1:10,4:11:20.81:328,21,0	0/0:8,0:7:4.42:0,4,141	0/0:15,0:12:36.10:0,36,885	0/0:21,0:20:51.15:0,51,1825	0/0:15,0:15:45.15:0,45,1565	0/0:31,0:30:90.31:0,90,3510	0/0:23,0:23:55.41:0,55,735	0/0:24,0:20:33.52:0,34,298	0/0:25,0:24:69.24:0,69,2944	0/0:29,0:28:75.25:0,75,2625	0/0:21,0:21:63.22:0,63,2546	0/0:25,0:23:66.22:0,66,2748
chr10	38451669	.	GGGGGA	G	3808.18	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=13.384;DP=504;FS=34.849;HRun=0;HaplotypeScore=118.9624;InbreedingCoeff=0.8754;MQ=82.67;MQ0=0;MQRankSum=-10.612;QD=19.53;ReadPosRankSum=4.921;VQSLOD=1.6915;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:81.25:0,81,2229	1/1:16,1:17:35.98:347,36,0	0/0:41,0:26:65.44:0,65,1286	0/0:30,0:24:27.25:0,27,1069	1/1:27,1:27:50.98:453,51,0	0/0:9,0:9:24.07:0,24,632	0/0:12,0:12:30.09:0,30,792	0/0:17,0:17:48.15:0,48,1186	1/1:18,2:20:45.06:516,45,0	0/0:11,0:11:27.07:0,27,664	0/0:10,0:10:21.06:0,21,605	1/1:11,0:11:1.55:4,2,0	1/1:16,3:19:44.73:560,45,0	1/1:15,0:15:26.39:354,26,0	1/1:18,0:18:45:435,45,0	1/1:26,1:27:54.01:526,54,0	1/1:25,2:27:57.04:590,57,0	0/0:8,0:8:24.07:0,24,584	0/0:6,0:6:18.06:0,18,438	0/0:23,0:23:63.21:0,63,1663	0/0:20,0:20:54.16:0,54,1488	0/0:13,0:13:36.12:0,36,980	0/1:13,0:13:7.68:22,0,8	0/0:25,0:25:2.98:0,3,30	0/0:13,0:13:33.10:0,33,914	0/0:12,0:12:36.11:0,36,966	0/0:22,0:22:63.19:0,63,1721	0/0:9,0:9:27.09:0,27,699
chr10	38451670	.	GGGGA	G	6737.91	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=12.296;DP=502;FS=34.732;HRun=0;HaplotypeScore=99.7279;InbreedingCoeff=0.9383;MQ=81.97;MQ0=0;MQRankSum=-10.833;QD=30.77;ReadPosRankSum=4.718;VQSLOD=2.7693;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:81.25:0,81,1891	1/1:1,16:17:36.08:597,36,0	0/0:39,0:25:63.81:0,64,1075	0/0:31,0:24:48.66:0,49,838	1/1:5,22:26:51.17:904,51,0	0/0:9,0:9:27.07:0,27,565	0/0:12,0:12:30.08:0,30,658	0/0:17,0:17:48.15:0,48,1007	1/1:2,18:20:45.15:786,45,0	0/0:12,0:12:30.03:0,30,579	0/0:10,0:10:21.05:0,21,514	1/1:11,0:11:2.94:18,3,0	1/1:3,15:18:44.99:766,45,0	1/1:4,13:17:48.15:813,48,0	1/1:1,17:18:45.15:812,45,0	1/1:1,26:27:54.18:959,54,0	1/1:3,23:26:57.19:995,57,0	0/0:8,0:8:24.07:0,24,496	0/0:6,0:6:18.06:0,18,364	0/0:23,0:23:63.17:0,63,1389	0/0:19,0:19:54.16:0,54,1266	0/0:12,0:12:36.12:0,36,826	1/1:13,0:13:3.48:46,3,0	1/1:25,0:25:8.02:41,8,0	0/0:13,0:13:33.10:0,33,775	0/0:12,0:12:36.11:0,36,823	0/0:22,0:22:63.19:0,63,1460	0/0:9,0:9:27.07:0,27,575
chr10	38451671	.	GGGA	G	4277.86	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=13.738;DP=496;FS=34.060;HRun=0;HaplotypeScore=98.4454;InbreedingCoeff=0.9544;MQ=80.23;MQ0=0;MQRankSum=-9.005;QD=19.53;ReadPosRankSum=4.286;VQSLOD=2.7162;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:81.24:0,81,1561	1/1:17,0:17:36.04:374,36,0	0/0:38,0:23:42.41:0,42,839	0/0:31,0:24:48.02:0,48,675	1/1:27,0:26:51.09:532,51,0	0/0:9,0:9:27.07:0,27,476	0/0:11,0:11:29.44:0,29,522	0/0:17,0:17:48.13:0,48,822	1/1:20,0:20:45.10:469,45,0	0/0:12,0:12:30.02:0,30,490	0/0:9,0:9:21.06:0,21,424	1/1:1,10:11:3.01:49,3,0	1/1:18,0:18:44.94:471,45,0	1/1:18,0:18:54.06:534,54,0	1/1:18,0:18:45.10:471,45,0	1/1:27,0:27:54.12:564,54,0	1/1:26,0:26:57.13:589,57,0	0/0:8,0:8:24.06:0,24,414	0/0:6,0:6:18.05:0,18,288	0/0:23,0:23:63.16:0,63,1138	0/0:18,0:18:54.17:0,54,1049	0/0:12,0:12:36.11:0,36,671	1/1:4,8:12:5.95:61,6,0	1/1:6,19:25:14.67:164,15,0	0/0:12,0:12:33.09:0,33,632	0/0:12,0:12:36.11:0,36,681	0/0:22,0:22:63.15:0,63,1197	0/0:9,0:9:26.97:0,27,466
chr10	38451672	.	GGA	G	3528.80	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=13.997;DP=497;FS=32.192;HRun=0;HaplotypeScore=92.7998;InbreedingCoeff=0.9546;MQ=81.70;MQ0=0;MQRankSum=-9.336;QD=16.41;ReadPosRankSum=4.439;VQSLOD=1.7733;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:84.22:0,84,1268	1/1:17,0:17:35.93:299,36,0	0/0:40,0:25:65.26:0,65,723	0/0:32,0:24:26.48:0,26,498	1/1:25,1:25:50.91:427,51,0	0/0:9,0:9:27.06:0,27,390	0/0:10,0:10:28.90:0,29,420	0/0:17,0:17:51.04:0,51,684	1/1:20,0:20:44.94:375,45,0	0/0:12,0:12:30.01:0,30,404	0/0:9,0:9:21.05:0,21,338	1/1:11,0:11:3:27,3,0	1/1:18,0:18:44.89:372,45,0	1/1:18,0:18:53.92:451,54,0	1/1:17,0:17:44.95:377,45,0	1/1:27,0:27:53.94:453,54,0	1/1:26,0:26:56.93:477,57,0	0/0:8,0:8:24.01:0,24,326	0/0:6,0:6:18.05:0,18,240	0/0:24,0:24:65.99:0,66,902	0/0:18,0:18:54.17:0,54,841	0/0:12,0:12:36.09:0,36,533	1/1:10,0:10:6.02:85,6,0	1/1:21,4:25:15.03:186,15,0	0/0:12,0:12:33.08:0,33,510	0/0:12,0:12:36.10:0,36,545	0/0:23,0:23:66.11:0,66,983	0/0:9,0:9:26.97:0,27,380
chr10	38451673	.	GA	G	2470.34	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=14.873;DP=493;FS=31.436;HRun=1;HaplotypeScore=87.3640;InbreedingCoeff=0.9026;MQ=82.82;MQ0=0;MQRankSum=-9.123;QD=10.12;ReadPosRankSum=3.985;VQSLOD=-0.1509;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:84.17:0,84,984	1/1:17,0:17:35.48:231,35,0	0/0:39,1:25:48.73:0,49,565	0/1:34,0:26:3.79:4,0,370	1/1:24,1:24:50.26:328,50,0	0/0:9,0:9:27.06:0,27,312	0/0:11,0:11:31.89:0,32,356	0/0:17,0:17:51.01:0,51,554	1/1:20,0:20:44.31:287,44,0	0/0:11,0:11:30.01:0,30,325	0/0:9,0:9:21.04:0,21,256	1/1:10,0:10:2.98:21,3,0	1/1:18,0:18:44.26:283,44,0	1/1:17,1:18:53.36:368,53,0	1/1:17,0:17:44.34:288,44,0	1/1:27,0:27:53.19:345,53,0	1/1:25,0:25:56.14:363,56,0	0/0:8,0:8:24:0,24,252	0/0:6,0:6:18.04:0,18,196	0/0:23,0:23:65.81:0,66,698	0/0:18,0:18:54.14:0,54,652	0/0:13,0:13:39.08:0,39,445	1/1:8,1:9:5.99:50,6,0	1/1:23,1:24:14.94:118,15,0	0/0:11,0:11:33.09:0,33,400	0/0:12,0:12:35.58:0,36,411	0/0:23,0:23:66.09:0,66,770	0/0:9,0:9:26.96:0,27,303
chr10	38452819	.	C	CCAACTTGAAAA	32041.34	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-2.002;DP=640;FS=12.462;HRun=0;HaplotypeScore=196.0071;InbreedingCoeff=0.9955;MQ=89.19;MQ0=0;MQRankSum=-19.820;QD=128.17;ReadPosRankSum=-1.885;VQSLOD=4.3287;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,99,3431	1/1:0,4:4:12.04:686,12,0	0/0:22,0:22:54.02:0,54,1566	0/0:40,0:40:99:0,111,3052	1/1:11,17:29:78.22:3542,78,0	0/0:20,0:20:60.19:0,60,1803	0/0:14,0:14:42.13:0,42,1319	0/0:18,0:18:45.15:0,45,1587	1/1:6,19:22:60.07:3262,60,0	0/0:23,0:23:57.18:0,57,1854	0/0:18,0:18:51.15:0,51,1639	1/1:4,17:21:54.19:2911,54,0	1/1:13,12:25:69.24:3571,69,0	1/1:8,14:25:63.22:3415,63,0	1/1:15,13:29:78.27:3940,78,0	1/1:13,12:24:69.24:3495,69,0	1/1:12,9:25:57.19:2669,57,0	0/0:20,0:20:54.19:0,54,1839	0/0:24,0:24:72.24:0,72,2327	0/0:21,0:21:57.20:0,57,2004	0/0:36,0:36:99:0,108,3694	0/0:26,0:26:78.25:0,78,2670	1/1:6,10:17:48.16:2303,48,0	1/1:8,10:19:45.15:2248,45,0	0/0:15,0:15:42.14:0,42,1427	0/0:24,0:24:57.66:0,58,1933	0/0:25,0:25:69.24:0,69,2339	0/0:10,0:10:30.10:0,30,1059
chr10	38453661	.	T	TTTGA	14459.89	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-14.463;DP=633;FS=8.500;HRun=0;HaplotypeScore=93.8192;InbreedingCoeff=0.9973;MQ=76.43;MQ0=1;MQRankSum=-4.972;QD=59.75;ReadPosRankSum=6.229;VQSLOD=6.0310;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,150,2781	1/1:0,7:7:15.05:410,15,0	0/0:17,0:17:48.15:0,48,852	0/0:14,0:14:36.10:0,36,623	1/1:3,21:25:57.17:1473,57,0	0/0:19,0:19:54.19:0,54,1024	0/0:30,0:30:75.24:0,75,1419	0/0:31,0:31:87.30:0,87,1660	1/1:2,21:23:57.20:1547,57,0	0/0:17,0:16:36.12:0,36,676	0/0:14,0:14:39.13:0,39,745	1/1:1,21:22:57.20:1560,57,0	1/1:1,15:17:42.14:1148,42,0	1/1:1,19:23:54.19:1478,54,0	1/1:1,15:19:39.13:1066,39,0	1/1:2,17:22:39:1067,39,0	1/1:2,35:38:87.77:2367,88,0	0/0:29,0:29:84.29:0,84,1578	0/0:21,0:21:60.14:0,60,1048	0/0:21,0:20:51.17:0,51,978	0/0:26,0:26:78.27:0,78,1439	0/0:20,0:20:51.15:0,51,922	1/1:3,15:19:36.12:977,36,0	1/1:0,24:26:51.18:1365,51,0	0/0:21,0:21:57.20:0,57,1068	0/0:20,0:20:57.20:0,57,1084	0/0:27,0:27:78.26:0,78,1464	0/0:10,0:10:24.08:0,24,454
chr10	38453838	.	CTCTCTG	C	794.60	PASS	AB=1.000;AC=24;AF=0.480;AN=50;BaseQRankSum=5.020;DP=462;FS=0.000;HRun=0;HaplotypeScore=105.0549;InbreedingCoeff=0.4679;MQ=58.10;MQ0=8;MQRankSum=-2.349;QD=3.95;ReadPosRankSum=1.430;VQSLOD=1.7610;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:22:20.44:21,0,20	1/1:3,5:8:3.01:62,3,0	./.	0/1:17,0:10:2.48:2,0,20	1/1:4,7:11:3.01:38,3,0	0/0:23,0:22:26.65:0,27,494	0/0:17,0:17:21.03:0,21,399	0/0:28,0:28:26.91:0,27,229	1/1:5,8:13:3.01:60,3,0	0/1:19,0:19:18.52:46,0,19	./.	1/1:11,0:11:5.95:44,6,0	1/1:11,0:10:5.99:50,6,0	1/1:4,7:8:6.02:124,6,0	1/1:4,11:15:9.03:163,9,0	1/1:13,0:13:11.97:168,12,0	1/1:8,8:16:3.01:60,3,0	0/1:17,0:17:82.83:119,0,83	0/0:24,0:22:36.07:0,36,847	0/0:9,0:8:8.99:0,9,189	0/0:24,0:24:36:0,36,633	0/0:14,0:13:3.01:0,3,72	./.	1/1:16,0:16:1.82:5,2,0	0/0:17,0:17:24.01:0,24,420	0/0:22,0:20:36.01:0,36,619	0/0:23,0:22:35.76:0,36,596	0/0:24,0:24:51.12:0,51,1389
chr10	38453860	.	CTG	C	857.48	PASS	AB=1.000;AC=19;AF=0.352;AN=54;BaseQRankSum=7.059;DP=441;FS=1.399;HRun=0;HaplotypeScore=77.6095;InbreedingCoeff=0.6244;MQ=47.61;MQ0=29;MQRankSum=-4.065;QD=6.21;ReadPosRankSum=1.314;VQSLOD=2.9924;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,18:19:11.95:146,12,0	1/1:6,0:6:2.13:7,2,0	0/0:16,0:3:3.92:0,4,74	0/0:25,0:7:14.40:0,14,201	0/0:17,0:16:8.79:0,9,63	0/0:15,0:14:36.08:0,36,581	0/0:20,0:19:45.05:0,45,715	0/0:32,0:29:86.09:0,86,1283	0/1:9,0:9:2.62:3,0,51	1/1:10,4:14:29.11:271,29,0	./.	1/1:7,0:7:11.89:88,12,0	0/0:8,0:7:11.50:0,11,73	1/1:10,0:7:4.44:14,4,0	0/1:15,0:15:3.89:4,0,44	0/1:13,0:12:5.77:6,0,90	1/1:10,0:10:2.37:8,2,0	1/1:14,4:18:48.51:454,49,0	0/0:27,0:22:63.17:0,63,1083	0/0:11,0:8:23.99:0,24,370	0/0:29,0:28:60.11:0,60,1022	0/0:12,0:10:17.97:0,18,265	0/0:2,0:13:3.01:0,3,47	1/1:1,0:14:3:28,3,0	0/0:15,0:15:33.11:0,33,611	0/0:19,0:17:21.31:0,21,737	0/0:18,0:17:36.12:0,36,668	0/0:19,0:19:57.11:0,57,1041
chr10	38453866	.	CTG	C	1046.75	PASS	AB=0.987;AC=21;AF=0.389;AN=54;BaseQRankSum=6.992;DP=438;FS=0.000;HRun=0;HaplotypeScore=81.9823;InbreedingCoeff=0.4659;MQ=43.56;MQ0=32;MQRankSum=-4.023;QD=5.75;ReadPosRankSum=0.983;VQSLOD=2.6091;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:19:11.95:146,12,0	1/1:7,0:6:2.66:12,3,0	./.	0/1:25,0:3:4.66:5,0,19	1/1:18,0:17:5.73:38,6,0	0/0:14,0:13:18.52:0,19,393	0/0:15,0:14:39.09:0,39,599	0/0:30,0:25:30.68:0,31,624	0/1:12,0:12:35.21:35,0,47	1/1:16,1:17:25.44:251,25,0	0/0:5,1:6:0:0,0,0	1/1:6,0:5:5.95:44,6,0	1/1:7,0:6:8.97:71,9,0	1/1:11,0:8:5.79:39,6,0	0/1:15,0:15:16.32:16,0,26	0/1:13,1:13:99:101,0,105	0/1:10,0:10:34.65:35,0,35	1/1:18,0:18:44.64:432,45,0	0/0:25,0:22:38.90:0,39,810	0/0:10,0:7:18.02:0,18,296	0/0:32,0:30:56.17:0,56,839	0/0:12,0:9:15.05:0,15,258	0/0:14,1:15:3.01:0,3,54	0/0:15,0:14:2.22:0,2,7	0/0:16,0:16:33.02:0,33,418	0/0:19,0:17:43.25:0,43,575	0/0:16,0:15:35.66:0,36,387	0/0:19,0:19:54.13:0,54,911
chr10	38453868	.	GTC	G	272.36	PASS	AB=0.967;AC=19;AF=0.380;AN=50;BaseQRankSum=5.634;DP=440;FS=2.071;HRun=0;HaplotypeScore=88.8053;InbreedingCoeff=0.0657;MQ=43.00;MQ0=33;MQRankSum=-3.415;QD=1.27;ReadPosRankSum=2.166;VQSLOD=1.6659;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:19:6.11:49,0,6	1/1:8,0:7:1.73:5,2,0	./.	./.	0/1:16,1:17:17.13:30,0,17	0/1:13,1:13:13.90:14,0,269	0/0:15,0:14:30.08:0,30,443	0/1:25,2:22:46.27:46,0,500	0/1:13,0:13:17.36:17,0,42	0/1:16,0:16:26.88:27,0,55	0/0:6,0:6:0:0,0,0	0/1:7,0:6:0:0,0,0	1/1:5,1:5:3.01:36,3,0	1/1:11,0:8:4.53:15,5,0	0/1:15,1:15:5.16:5,0,40	0/1:13,1:13:47.40:47,0,125	0/1:11,0:11:14.18:14,0,58	1/1:15,0:15:14.85:110,15,0	0/0:24,0:21:40.99:0,41,637	0/0:9,0:6:15.05:0,15,240	0/0:34,0:32:17.31:0,17,651	0/0:14,0:11:15.94:0,16,242	0/1:16,0:16:2.19:2,0,43	./.	0/0:16,1:17:22.53:0,23,277	0/0:18,0:16:29.99:0,30,427	0/0:16,1:16:11.97:0,12,169	0/0:18,0:18:45.12:0,45,690
chr10	38453906	.	C	CCT	199.30	PASS	AB=0.968;AC=11;AF=0.196;AN=56;BaseQRankSum=6.171;DP=464;FS=0.000;HRun=0;HaplotypeScore=150.7431;InbreedingCoeff=-0.1428;MQ=62.20;MQ0=15;MQRankSum=-4.225;QD=1.00;ReadPosRankSum=-1.322;VQSLOD=2.0645;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:13:14.98:0,15,307	0/1:8,1:8:69.16:69,0,175	0/1:28,0:12:17.85:18,0,133	0/1:59,0:27:10.05:10,0,130	0/0:18,0:18:8.21:0,8,146	0/1:13,0:13:30.39:30,0,303	0/0:12,0:11:5.69:0,6,292	0/0:24,0:23:59.27:0,59,817	0/0:7,0:7:15.04:0,15,222	0/1:17,1:17:80.16:80,0,335	1/1:10,0:9:1.53:4,2,0	0/0:10,0:10:17.99:0,18,261	0/0:5,0:5:12.51:0,13,191	0/0:12,0:10:8.94:0,9,114	0/0:17,0:14:32.94:0,33,466	0/0:11,0:11:24.01:0,24,358	0/0:9,0:9:15.05:0,15,242	0/0:12,0:11:9.81:0,10,380	0/1:20,1:20:13.58:14,0,654	0/0:18,0:17:24.94:0,25,348	0/0:30,0:27:56.98:0,57,925	0/1:14,0:14:41.40:41,0,309	0/0:18,0:18:13.09:0,13,200	0/0:9,0:9:8.92:0,9,113	0/1:16,1:16:59.55:60,0,311	0/0:24,0:19:32.98:0,33,668	0/0:12,0:12:5.37:0,5,198	0/1:9,0:9:11.03:11,0,302
chr10	38453914	.	C	CCT	218.70	PASS	AB=0.965;AC=13;AF=0.232;AN=56;BaseQRankSum=5.572;DP=436;FS=0.000;HRun=0;HaplotypeScore=150.9363;InbreedingCoeff=-0.1849;MQ=66.23;MQ0=17;MQRankSum=-5.292;QD=1.42;ReadPosRankSum=-2.621;VQSLOD=1.5604;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:11:12.92:0,13,283	0/1:9,0:9:31.06:31,0,99	0/0:33,0:13:13.47:0,13,290	0/0:56,0:30:22.13:0,22,327	0/0:15,1:16:7.98:0,8,82	0/1:12,1:13:11.64:12,0,276	0/1:12,1:13:32.62:33,0,287	0/0:21,0:21:53.99:0,54,866	0/0:7,0:7:14.82:0,15,128	0/1:17,0:16:56.09:56,0,357	1/1:8,0:8:2.21:8,2,0	0/0:10,0:10:17.98:0,18,168	0/0:5,0:5:11.94:0,12,94	0/0:9,0:7:9.01:0,9,98	0/0:16,0:14:29.70:0,30,222	0/0:11,0:11:23.68:0,24,184	0/0:6,0:6:14.35:0,14,129	0/1:10,1:10:29.39:29,0,354	0/0:17,0:16:1.14:0,1,475	0/0:20,0:18:15.20:0,15,242	0/0:31,0:27:51.17:0,51,818	0/1:14,0:13:54:54,0,262	0/1:16,0:16:39.24:39,0,102	0/0:8,0:8:8.93:0,9,68	0/1:16,0:15:46.90:47,0,311	0/1:21,0:19:5.10:5,0,604	0/1:9,0:9:2.48:2,0,47	0/1:4,1:5:45.26:45,0,99
chr10	38453941	.	T	TC	1064.67	PASS	AB=0.913;AC=38;AF=0.731;AN=52;BaseQRankSum=-0.205;DP=239;FS=11.843;HRun=3;HaplotypeScore=90.7986;InbreedingCoeff=0.1285;MQ=66.17;MQ0=4;MQRankSum=-2.446;QD=5.35;ReadPosRankSum=0.093;VQSLOD=-0.5190;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:6,0:5:1.34:15,0,1	1/1:3,0:3:2.80:13,3,0	0/0:18,0:6:14.96:0,15,157	0/1:30,1:18:15.31:15,0,72	0/1:10,3:13:2.52:9,0,3	1/1:6,1:7:4.97:71,5,0	1/1:5,0:5:6.19:20,6,0	1/1:5,3:7:4.38:112,4,0	0/1:4,1:5:3.86:34,0,4	1/1:5,2:7:0.58:114,1,0	1/1:2,2:4:4.83:42,5,0	0/0:7,0:7:1.70:0,2,9	1/1:4,0:4:2.04:6,2,0	1/1:3,2:4:1.61:27,2,0	0/0:6,1:6:4.07:0,4,12	0/0:6,0:6:5.30:0,5,17	1/1:3,0:3:1.82:5,2,0	0/1:4,0:4:6.27:22,0,6	1/1:3,4:8:15.89:167,16,0	1/1:8,3:10:1.85:42,2,0	0/1:16,3:17:8.47:23,0,8	1/1:8,3:11:2.89:89,3,0	1/1:5,6:11:5.95:48,6,0	./.	1/1:10,4:14:12.77:155,13,0	1/1:8,3:11:2.32:156,2,0	1/1:5,0:5:2.68:11,3,0	./.
chr10	38453944	.	CA	C	1674.80	PASS	AB=0.730;AC=47;AF=0.870;AN=54;BaseQRankSum=-1.089;DP=193;FS=15.257;HRun=1;HaplotypeScore=68.9740;InbreedingCoeff=0.0701;MQ=69.69;MQ0=4;MQRankSum=0.058;QD=9.36;ReadPosRankSum=1.588;VQSLOD=-0.1454;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,2:4:5.99:64,6,0	1/1:1,0:1:3:27,3,0	0/0:14,0:5:15.05:0,15,230	0/1:27,1:17:35.69:36,0,43	1/1:6,2:9:6.72:60,7,0	1/1:3,2:5:8.64:59,9,0	1/1:0,4:5:8.82:90,9,0	1/1:5,2:6:9.89:94,10,0	1/1:1,3:4:8.76:96,9,0	1/1:6,0:6:3.38:30,3,0	1/1:3,1:4:2.92:19,3,0	0/1:2,4:6:5.32:113,0,5	1/1:0,1:1:3.01:41,3,0	1/1:3,2:4:6.46:65,6,0	1/1:1,4:4:6.02:83,6,0	1/1:1,3:4:10.28:128,10,0	1/1:0,2:2:3.01:42,3,0	1/1:1,2:4:9.02:112,9,0	1/1:8,0:7:1.41:61,1,0	1/1:6,3:8:12.15:78,12,0	1/1:4,10:12:14.89:163,15,0	1/1:7,5:11:12.65:111,13,0	0/1:8,2:10:12.45:29,0,12	0/1:0,1:1:0:0,0,0	0/1:7,4:12:1.22:97,0,1	1/1:8,1:9:4.21:70,4,0	1/1:1,1:3:4.23:25,4,0	./.
chr10	38453946	.	TC	T	657.58	PASS	AB=0.964;AC=42;AF=0.808;AN=52;BaseQRankSum=-0.152;DP=184;FS=11.433;HRun=1;HaplotypeScore=71.1451;InbreedingCoeff=0.0165;MQ=68.35;MQ0=4;MQRankSum=-3.994;QD=3.89;ReadPosRankSum=2.501;VQSLOD=-0.6715;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,1:3:4.83:47,5,0	1/1:1,0:1:0.47:1,0,0	0/0:12,0:5:15.05:0,15,220	0/1:25,1:15:23.09:23,0,42	0/1:7,2:9:2.78:37,0,3	1/1:3,2:5:13.44:81,13,0	1/1:5,0:5:4.63:16,5,0	1/1:5,0:4:8.18:37,8,0	0/1:4,0:4:0.64:12,0,1	1/1:4,0:5:2.80:34,3,0	1/1:4,0:4:5.30:47,5,0	1/1:4,1:5:5.67:15,6,0	1/1:1,0:1:2.04:6,2,0	1/1:4,0:4:7.89:62,8,0	1/1:5,0:4:4.53:15,5,0	1/1:4,0:4:8.15:24,8,0	1/1:2,0:2:1.82:5,2,0	1/1:3,1:4:4.46:16,4,0	1/1:7,0:6:1.96:42,2,0	0/1:9,0:8:6.33:12,0,6	0/1:12,1:11:9.43:71,0,9	0/1:12,0:11:12.19:50,0,12	1/1:10,0:10:0.34:14,0,0	./.	1/1:9,3:12:13.26:75,13,0	0/1:8,0:9:40.93:41,0,49	0/1:3,0:3:0:0,0,0	./.
chr10	38455190	.	CCT	C	310.29	PASS	AB=0.790;AC=19;AF=0.380;AN=50;BaseQRankSum=1.092;DP=202;FS=3.126;HRun=0;HaplotypeScore=109.7525;InbreedingCoeff=0.0831;MQ=40.56;MQ0=30;MQRankSum=-0.009;QD=2.93;ReadPosRankSum=-0.412;VQSLOD=2.0853;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:6,7:12:8.59:55,9,0	./.	./.	0/0:17,0:4:5.96:0,6,44	1/1:9,0:9:2.46:6,2,0	0/0:5,1:5:1.59:0,2,15	1/1:12,0:7:5.42:16,5,0	0/0:1,0:1:3.01:0,3,58	1/1:3,0:2:1.20:9,1,0	0/1:2,4:5:4.78:114,0,5	0/0:3,0:3:4.13:0,4,19	0/1:8,0:7:20.25:20,0,55	0/0:2,0:1:1.82:0,2,5	0/0:7,0:7:10.09:0,10,239	0/0:5,0:4:0.35:0,0,2	0/0:10,0:9:1.07:0,1,68	0/0:9,0:8:2:0,2,63	0/1:2,2:4:49.54:56,0,50	./.	0/0:4,1:5:4.50:0,5,23	1/1:1,6:6:2.28:10,2,0	0/0:6,6:11:5.08:0,5,22	0/1:10,0:10:2.66:3,0,166	0/0:6,0:6:2.34:0,2,25	1/1:8,6:14:0.96:14,1,0	0/1:9,4:9:73.62:82,0,74	0/1:4,1:5:4.19:40,0,4	0/1:1,1:2:2.04:15,0,2
chr10	38455192	.	TTC	T	1226.34	PASS	AB=0.905;AC=34;AF=0.680;AN=50;BaseQRankSum=1.337;DP=202;FS=4.771;HRun=0;HaplotypeScore=105.9397;InbreedingCoeff=-0.1011;MQ=40.58;MQ0=28;MQRankSum=-0.266;QD=7.48;ReadPosRankSum=-2.473;VQSLOD=2.6722;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,1:12:19.51:163,20,0	./.	./.	0/0:18,0:4:6:0,6,67	1/1:9,0:9:7.22:28,7,0	1/1:4,2:5:2.14:33,2,0	0/1:9,2:7:25.45:41,0,25	0/0:1,0:1:3.01:0,3,61	1/1:2,1:2:5.99:59,6,0	0/1:6,0:5:4.22:97,0,4	0/1:2,1:3:0.92:1,0,1	0/1:6,2:7:48.67:64,0,49	1/1:2,0:1:3.01:30,3,0	0/0:7,0:7:4.58:0,5,233	1/1:5,0:4:5.74:43,6,0	0/1:9,1:9:56.79:70,0,57	0/1:7,1:8:47.45:47,0,80	0/1:3,0:4:48.84:84,0,49	./.	1/1:4,1:5:0.45:25,0,0	1/1:6,0:6:1.64:6,2,0	1/1:10,2:11:0.86:28,1,0	0/1:9,1:10:69.27:69,0,170	1/1:6,0:6:2.24:33,2,0	1/1:8,6:14:14.29:136,14,0	0/1:12,1:9:72.30:143,0,72	1/1:3,2:5:6.38:128,6,0	0/1:2,0:2:1.99:36,0,2
chr10	38455196	.	TTC	T	1443.42	PASS	AB=0.867;AC=35;AF=0.673;AN=52;BaseQRankSum=3.914;DP=218;FS=10.417;HRun=0;HaplotypeScore=106.8391;InbreedingCoeff=-0.0068;MQ=39.87;MQ0=27;MQRankSum=-0.010;QD=8.25;ReadPosRankSum=-0.267;VQSLOD=2.6367;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,2:12:16.37:162,16,0	./.	0/0:15,0:2:6:0,6,54	0/0:19,0:4:8.49:0,8,83	1/1:7,2:9:7.39:30,7,0	0/1:4,3:6:8.35:74,0,8	0/1:9,3:7:28.29:28,0,57	0/0:1,0:1:3.01:0,3,61	1/1:3,0:2:5.79:38,6,0	1/1:5,1:5:15.03:163,15,0	1/1:1,2:3:6.91:99,7,0	0/1:6,3:8:45.15:45,0,53	1/1:2,0:1:3.01:31,3,0	0/0:7,1:8:5.52:0,6,235	1/1:4,1:4:5.80:44,6,0	0/1:9,0:9:44.34:61,0,44	0/1:8,1:8:60.69:61,0,129	0/1:4,0:4:48.85:86,0,49	./.	1/1:4,3:7:8.74:112,9,0	1/1:8,0:7:1.58:6,2,0	1/1:15,2:17:3.55:76,4,0	0/1:9,1:10:34.84:35,0,162	1/1:6,0:6:5.75:43,6,0	0/1:11,2:14:9.76:53,0,10	0/1:11,2:9:34.36:183,0,34	1/1:4,1:5:13.09:106,13,0	1/1:1,0:2:5.99:61,6,0
chr10	38455198	.	C	CT	1142.97	PASS	AB=0.847;AC=33;AF=0.635;AN=52;BaseQRankSum=3.462;DP=229;FS=0.000;HRun=2;HaplotypeScore=124.2584;InbreedingCoeff=-0.2038;MQ=42.80;MQ0=25;MQRankSum=-0.810;QD=5.74;ReadPosRankSum=-0.387;VQSLOD=0.2370;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,7:12:11:105,11,0	./.	0/1:14,0:2:6.03:6,0,13	0/0:21,0:6:8.72:0,9,59	1/1:4,6:10:6.24:84,6,0	0/1:8,1:8:9.04:30,0,9	0/1:11,0:7:4.12:4,0,52	0/0:1,0:1:3.01:0,3,42	1/1:2,1:2:0.52:32,1,0	1/1:2,4:5:14.95:136,15,0	1/1:4,0:4:9.54:61,10,0	0/1:9,0:8:32.66:33,0,55	1/1:2,0:1:3.01:47,3,0	0/1:7,1:8:23.68:24,0,144	1/1:5,1:5:5.21:86,5,0	0/1:7,3:9:26.15:47,0,26	0/1:7,2:8:96.81:99,0,97	0/1:3,2:5:27.64:60,0,28	./.	0/1:6,1:7:5.93:31,0,6	0/0:2,6:7:1.81:0,2,5	1/1:12,7:18:9.48:42,9,0	0/1:9,3:11:55.75:56,0,89	1/1:0,6:6:9:117,9,0	0/1:8,6:14:22.23:22,0,28	0/1:10,4:10:49.43:109,0,49	0/1:4,1:5:18.38:27,0,18	1/1:0,2:2:5.88:36,6,0
chr10	38455201	.	C	CT	1872.97	PASS	AB=0.816;AC=33;AF=0.611;AN=54;BaseQRankSum=-0.817;DP=252;FS=11.821;HRun=1;HaplotypeScore=121.2363;InbreedingCoeff=-0.1580;MQ=41.73;MQ0=20;MQRankSum=-0.340;QD=8.55;ReadPosRankSum=-0.663;VQSLOD=-0.2050;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,8:13:17.52:250,18,0	./.	0/0:16,0:2:5.97:0,6,50	0/1:22,0:7:0.97:1,0,87	1/1:4,6:10:12.90:132,13,0	0/1:9,2:10:5.98:130,0,6	0/1:13,0:9:33.03:33,0,41	0/0:1,0:1:3.01:0,3,42	1/1:2,1:2:0.03:36,0,0	1/1:2,4:5:10.02:186,10,0	0/0:7,0:7:1.19:0,1,4	0/0:9,0:8:11.04:0,11,64	1/1:2,0:1:3.01:47,3,0	0/1:6,1:8:14.83:51,0,15	1/1:5,1:5:9.01:118,9,0	0/1:3,2:9:7.41:41,0,7	0/1:7,2:8:68.98:119,0,69	0/1:4,2:5:30.01:117,0,30	1/1:1,0:1:3.01:32,3,0	0/1:7,1:8:13.30:40,0,13	1/1:5,6:10:1.50:13,2,0	0/1:11,7:18:9.81:42,0,10	0/1:11,3:13:7.78:97,0,8	1/1:0,6:6:8.99:137,9,0	0/1:9,7:16:43.40:79,0,43	0/1:12,4:13:48.94:242,0,49	0/1:6,1:7:30.76:34,0,31	1/1:2,1:3:5.05:46,5,0
chr10	38455204	.	TTC	T	596.89	PASS	AB=0.889;AC=23;AF=0.411;AN=56;BaseQRankSum=2.885;DP=257;FS=2.785;HRun=0;HaplotypeScore=120.8378;InbreedingCoeff=-0.3869;MQ=41.58;MQ0=17;MQRankSum=-1.922;QD=3.21;ReadPosRankSum=-0.604;VQSLOD=2.5470;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:13,0:13:24.38:24,0,59	1/1:1,0:1:3.01:38,3,0	0/0:19,0:4:5.98:0,6,55	0/0:22,0:7:8.72:0,9,134	0/1:7,3:10:6.97:7,0,31	0/1:11,0:10:14.68:15,0,57	0/1:7,5:9:75.18:75,0,97	0/0:1,0:1:3.01:0,3,61	1/1:3,0:2:4.69:20,5,0	0/1:6,0:5:9.77:10,0,68	0/1:8,0:8:5.03:73,0,5	0/1:5,2:8:28.44:113,0,28	1/1:2,0:1:2.68:11,3,0	0/1:5,3:8:60.25:60,0,146	0/1:3,3:5:9.04:9,0,17	0/0:10,0:9:4.08:0,4,48	0/0:8,1:8:0.84:0,1,187	0/1:6,0:5:15.05:15,0,90	0/0:1,0:1:3.01:0,3,34	0/1:7,2:9:14.22:44,0,14	0/1:11,0:10:1.72:2,0,7	0/1:18,1:19:15.18:17,0,15	0/1:10,4:13:63.98:90,0,64	0/0:6,0:6:0.98:0,1,11	0/1:15,0:16:28.58:29,0,68	0/1:13,2:14:63.59:64,0,194	0/1:7,0:7:26.01:26,0,31	0/0:2,0:2:5.45:0,5,28
chr10	38455209	.	C	CT	283.29	PASS	AB=0.970;AC=11;AF=0.196;AN=56;BaseQRankSum=1.934;DP=280;FS=2.275;HRun=1;HaplotypeScore=134.4672;InbreedingCoeff=0.1876;MQ=44.03;MQ0=15;MQRankSum=-0.269;QD=3.78;ReadPosRankSum=0.009;VQSLOD=0.1899;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:9.14:0,9,212	0/0:1,0:1:2.68:0,3,11	0/0:19,0:5:8.95:0,9,78	0/0:23,0:7:3.53:0,4,75	0/1:13,0:13:54.91:66,0,55	0/0:12,0:11:13.38:0,13,194	0/1:13,0:10:20.56:21,0,115	0/0:1,0:1:3.01:0,3,42	1/1:4,1:4:9.91:124,10,0	0/0:9,0:8:22.07:0,22,215	0/0:9,0:9:10.96:0,11,129	0/0:11,0:10:16.74:0,17,198	1/1:1,1:1:3:26,3,0	0/0:8,0:8:19.83:0,20,138	1/1:7,1:7:3.25:46,3,0	0/0:9,0:8:7.82:0,8,42	0/0:9,0:8:8.46:0,8,133	0/0:6,0:5:3.58:0,4,74	0/0:2,0:2:5.98:0,6,62	0/0:10,0:10:8.35:0,8,98	0/1:11,0:10:3.14:3,0,78	0/0:19,0:19:23.28:0,23,264	0/1:14,3:16:99:113,0,103	0/1:6,0:6:16.12:22,0,16	0/0:17,0:17:28.37:0,28,384	0/0:16,0:16:10.55:0,11,323	0/0:8,0:8:21.85:0,22,188	0/0:2,0:2:6.02:0,6,73
chr10	38455210	.	CCTTCCTCA	C	2171.57	PASS	AB=0.967;AC=39;AF=0.696;AN=56;BaseQRankSum=-2.115;DP=279;FS=13.910;HRun=0;HaplotypeScore=146.9591;InbreedingCoeff=0.0166;MQ=44.18;MQ0=12;MQRankSum=-2.468;QD=9.20;ReadPosRankSum=-1.101;VQSLOD=1.5989;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:14:33.69:294,34,0	0/0:2,0:2:1.54:0,2,4	0/0:17,0:5:5.90:0,6,40	0/0:23,0:7:13.53:0,14,121	1/1:13,0:13:8.20:45,8,0	1/1:12,0:11:9.82:142,10,0	0/1:13,0:10:12.19:132,0,12	0/0:1,0:1:3.01:0,3,62	0/1:6,0:5:7.69:28,0,8	1/1:8,0:8:23.76:185,24,0	1/1:9,0:9:19.95:115,20,0	0/1:11,0:10:8.32:61,0,8	1/1:2,0:1:3.01:41,3,0	0/1:8,0:8:15.48:34,0,15	1/1:8,0:7:5.35:62,5,0	1/1:9,0:8:0.24:40,0,0	0/1:9,0:8:46.71:47,0,61	0/1:6,0:5:48.13:93,0,48	1/1:2,0:2:5.81:34,6,0	1/1:10,0:10:8.75:95,9,0	1/1:11,0:10:4.72:52,5,0	0/1:11,8:19:5.02:125,0,5	1/1:17,0:16:4.99:155,5,0	1/1:6,0:6:8.15:62,8,0	0/1:17,0:17:35.93:174,0,36	0/1:16,0:16:8.47:173,0,8	1/1:8,0:8:4.23:81,4,0	1/1:2,0:2:5.98:56,6,0
chr10	38455212	.	TTC	T	475.66	PASS	AB=0.898;AC=16;AF=0.286;AN=56;BaseQRankSum=1.798;DP=276;FS=0.000;HRun=0;HaplotypeScore=134.4899;InbreedingCoeff=-0.3004;MQ=44.63;MQ0=10;MQRankSum=-1.134;QD=3.45;ReadPosRankSum=-0.666;VQSLOD=2.2715;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:11,1:12:29.54:0,30,287	1/1:2,0:2:3.46:24,3,0	0/0:16,0:5:0.39:0,0,37	0/0:22,0:7:15.50:0,16,191	0/0:11,1:13:4.94:0,5,95	0/1:9,3:11:48.57:49,0,162	0/1:8,2:8:31.40:31,0,118	0/0:2,0:1:3.01:0,3,61	0/1:6,0:5:1.63:2,0,34	0/1:7,1:8:24.76:25,0,217	0/1:8,2:10:99:120,0,100	0/0:9,2:10:3.32:0,3,96	0/0:2,0:1:3:0,3,28	0/0:7,0:7:21.03:0,21,220	0/1:7,1:7:2.80:3,0,69	0/0:8,1:8:8.22:0,8,62	0/1:8,0:8:6.25:6,0,140	0/1:6,0:5:27.54:28,0,113	0/1:3,0:3:14.80:15,0,51	0/1:7,3:10:91.05:91,0,91	0/1:12,0:11:0.45:0,0,98	0/1:18,1:19:20.78:21,0,243	0/0:14,2:16:25.61:0,26,191	0/0:7,0:7:8.34:0,8,76	0/0:16,2:18:9.50:0,10,287	0/1:12,2:15:99:106,0,267	0/1:5,3:8:89.51:96,0,90	0/0:2,0:2:6.01:0,6,66
chr10	38455214	.	C	CCT	427.59	PASS	AB=0.961;AC=15;AF=0.268;AN=56;BaseQRankSum=1.782;DP=298;FS=7.177;HRun=0;HaplotypeScore=147.5268;InbreedingCoeff=-0.2994;MQ=44.05;MQ0=9;MQRankSum=-0.370;QD=2.89;ReadPosRankSum=-2.003;VQSLOD=1.5656;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:11.05:0,11,245	1/1:3,0:2:3.27:14,3,0	0/0:18,0:6:5.45:0,5,35	0/0:25,0:9:14.85:0,15,178	0/0:14,0:14:10.21:0,10,87	0/1:13,0:12:29.84:30,0,109	0/0:11,0:9:5.35:0,5,78	0/0:3,0:1:3.01:0,3,40	0/1:7,0:6:24.17:24,0,34	0/1:9,0:9:10.39:10,0,161	0/1:10,0:10:69.88:84,0,70	0/0:11,0:10:2.20:0,2,60	0/0:2,0:2:2.89:0,3,25	0/0:7,0:7:18.43:0,18,135	0/0:8,0:7:9.32:0,9,69	0/0:9,0:8:4.36:0,4,32	0/1:10,0:8:3.91:4,0,97	0/1:6,0:5:8.34:8,0,83	0/1:2,1:3:37.78:38,0,40	0/1:10,2:12:55.79:102,0,56	0/1:13,0:12:11.89:12,0,69	0/1:18,1:19:24.31:24,0,173	0/0:18,0:17:26.85:0,27,186	0/0:8,0:8:11.25:0,11,80	0/1:19,0:19:17.02:17,0,194	0/1:14,1:15:99:116,0,177	0/1:9,0:9:63.99:90,0,64	0/0:2,0:2:6.01:0,6,56
chr10	38455216	.	TCA	T	544.94	PASS	AB=0.898;AC=15;AF=0.268;AN=56;BaseQRankSum=3.397;DP=308;FS=1.692;HRun=0;HaplotypeScore=141.6608;InbreedingCoeff=-0.4000;MQ=48.16;MQ0=8;MQRankSum=-0.338;QD=2.93;ReadPosRankSum=1.649;VQSLOD=2.5302;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:32.88:0,33,328	0/1:2,1:2:9.86:36,0,10	0/1:21,0:9:3.95:4,0,56	0/0:26,0:9:18.35:0,18,263	0/0:14,0:14:7.22:0,7,154	0/1:11,1:12:21.38:21,0,167	0/1:11,1:10:24.58:25,0,110	0/0:3,0:1:2.98:0,3,22	0/1:6,1:6:19.29:19,0,55	0/0:9,0:9:15.07:0,15,240	0/1:10,1:11:59.87:60,0,119	0/1:9,2:10:69.93:70,0,78	0/0:2,0:2:3.48:0,3,34	0/0:7,0:7:14.68:0,15,109	0/1:8,0:7:18.64:19,0,96	0/1:8,1:8:27.20:30,0,27	0/0:12,0:10:11.84:0,12,125	0/0:6,0:5:5.28:0,5,95	0/0:4,0:4:8.37:0,8,81	0/1:10,2:12:52.05:52,0,99	0/0:14,0:13:10.08:0,10,159	0/1:18,1:19:22.38:22,0,249	0/1:17,1:17:40.39:40,0,189	0/0:8,0:8:8.64:0,9,80	0/1:14,5:19:99:130,0,289	0/1:13,2:15:72.72:73,0,265	0/1:8,1:9:93.43:93,0,116	0/0:3,0:3:5.93:0,6,69
chr10	38455228	.	T	TGC	207.90	PASS	AB=0.911;AC=11;AF=0.196;AN=56;BaseQRankSum=2.986;DP=365;FS=6.225;HRun=0;HaplotypeScore=155.6499;InbreedingCoeff=-0.2605;MQ=51.43;MQ0=6;MQRankSum=-3.763;QD=1.42;ReadPosRankSum=-1.353;VQSLOD=1.5561;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:37.94:0,38,572	0/1:2,1:2:26.35:26,0,29	0/1:29,0:18:3.45:3,0,301	0/0:26,0:12:18.36:0,18,250	0/0:18,1:19:16.35:0,16,246	0/1:13,1:14:6.64:7,0,405	0/0:19,0:18:30.43:0,30,513	0/0:7,0:4:6.82:0,7,119	0/1:7,0:6:24.04:24,0,132	0/0:12,0:10:29.75:0,30,397	0/1:15,1:16:18.35:18,0,453	0/1:10,2:11:15.09:15,0,201	0/0:2,0:2:6.02:0,6,83	0/0:13,0:13:20.49:0,20,247	0/0:9,0:8:17.58:0,18,226	0/0:5,0:4:6.02:0,6,95	0/0:9,0:8:14.39:0,14,142	0/0:8,0:7:15.05:0,15,244	0/1:5,0:4:20.66:21,0,127	0/1:12,1:13:24.46:24,0,251	0/0:19,0:18:30.25:0,30,449	0/0:20,1:21:19.20:0,19,374	0/0:18,1:19:4.63:0,5,399	0/0:11,0:11:12.66:0,13,180	0/1:14,5:20:99:119,0,486	0/1:14,2:16:48.99:49,0,423	0/1:10,1:10:41.89:42,0,238	0/0:4,0:4:9.03:0,9,146
chr10	38455235	.	CCT	C	79.53	PASS	AB=0.987;AC=10;AF=0.179;AN=56;BaseQRankSum=4.619;DP=361;FS=0.000;HRun=0;HaplotypeScore=145.5185;InbreedingCoeff=-0.0104;MQ=56.15;MQ0=6;MQRankSum=-4.340;QD=0.87;ReadPosRankSum=-2.212;VQSLOD=1.9226;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:40.13:0,40,692	1/1:3,1:3:4.57:30,5,0	0/0:29,0:20:18.65:0,19,462	0/0:24,0:13:17.40:0,17,280	0/0:17,1:18:15.92:0,16,169	0/0:13,1:14:16.84:0,17,529	0/0:20,0:19:31.89:0,32,793	0/1:7,0:4:2.47:2,0,171	0/1:6,0:6:2.78:3,0,36	0/0:12,1:11:28.27:0,28,483	0/0:16,0:16:17.20:0,17,553	0/0:8,0:7:16.92:0,17,179	0/1:3,0:3:17.22:20,0,17	0/0:12,0:12:23.75:0,24,203	0/1:9,0:8:8.50:8,0,132	0/0:4,1:4:6.77:0,7,63	0/1:9,0:8:28.49:28,0,113	0/0:11,0:10:14.27:0,14,402	0/0:6,0:5:11.69:0,12,168	0/0:12,1:13:24.44:0,24,408	0/0:20,0:19:29.13:0,29,577	0/0:20,0:20:28.86:0,29,463	0/1:14,0:15:32.16:32,0,185	0/0:11,0:11:13.04:0,13,137	0/1:20,1:21:69.81:70,0,575	0/1:16,1:17:18.69:19,0,593	0/0:9,0:8:24.01:0,24,397	0/0:4,0:4:9.03:0,9,183
chr10	38455342	.	G	GCCTTCCTCCCTT	11782.24	PASS	AC=22;AF=0.407;AN=54;BaseQRankSum=-3.910;DP=567;FS=72.680;HRun=0;HaplotypeScore=146.7543;InbreedingCoeff=0.9250;MQ=45.66;MQ0=45;MQRankSum=-11.088;QD=61.05;ReadPosRankSum=-3.942;VQSLOD=1.6608;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:37:60.12:0,60,1840	1/1:3,3:7:9.03:527,9,0	./.	0/0:12,0:1:3.01:0,3,58	1/1:6,7:15:12:500,12,0	0/0:21,0:21:42.14:0,42,1445	0/0:24,0:18:30.01:0,30,875	0/0:22,0:18:18.03:0,18,398	1/1:12,10:22:27.09:1573,27,0	0/0:29,0:27:48.16:0,48,1526	0/0:18,0:18:51.18:0,51,1716	1/1:10,8:18:24.08:1247,24,0	1/1:6,6:12:24.08:1383,24,0	1/1:9,10:20:30.10:1758,30,0	1/1:14,21:34:42.14:2403,42,0	1/1:5,6:13:15.05:879,15,0	1/1:12,4:16:6.02:301,6,0	0/0:20,0:19:33.05:0,33,983	0/0:9,0:6:12.04:0,12,388	0/0:16,0:14:30.10:0,30,986	0/0:37,0:35:57.20:0,57,1903	0/0:32,0:32:75.23:0,75,2369	1/1:4,4:11:9.03:526,9,0	1/1:11,10:22:15.52:684,16,0	0/0:22,0:20:39.13:0,39,1309	0/0:22,0:21:48.16:0,48,1472	0/0:25,0:20:35.68:0,36,1116	0/0:6,0:6:18.06:0,18,626
chr10	38459640	.	GTA	G	233.90	PASS	AB=0.965;AC=7;AF=0.125;AN=56;BaseQRankSum=9.037;DP=660;FS=11.229;HRun=0;HaplotypeScore=102.7031;InbreedingCoeff=-0.1706;MQ=57.00;MQ0=14;MQRankSum=3.054;QD=1.16;ReadPosRankSum=3.219;VQSLOD=0.4474;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:59,0:59:48.87:49,0,318	0/0:9,0:9:23.03:0,23,191	0/0:24,0:8:11.15:0,11,124	0/0:29,0:15:7.62:0,8,150	0/0:20,0:19:20.46:0,20,145	0/0:25,0:25:48.10:0,48,1016	0/0:32,0:32:44.47:0,44,854	0/0:37,0:36:99:0,102,1137	0/0:18,0:18:26.77:0,27,260	0/1:21,0:21:81.09:81,0,177	0/1:21,0:21:43.46:43,0,73	0/0:19,0:19:9:0,9,84	0/0:12,0:12:26.50:0,26,222	0/0:16,0:16:20.51:0,21,171	0/1:20,0:19:30.84:31,0,313	0/0:19,0:19:35.72:0,36,369	0/0:18,0:18:0.40:0,0,170	0/1:28,0:27:57.93:121,0,58	0/0:10,0:8:2.96:0,3,177	0/0:25,0:25:46.83:0,47,885	0/0:55,0:55:33.51:0,34,1898	0/0:13,0:13:25.88:0,26,471	0/1:12,0:12:19.15:19,0,140	0/1:27,13:40:18.07:18,0,336	0/0:21,0:21:44.91:0,45,646	0/0:28,0:28:18.35:0,18,1021	0/0:13,0:13:26.32:0,26,567	0/0:15,0:15:44.94:0,45,715
chr10	38459642	.	ATG	A	1386.07	PASS	AB=0.972;AC=13;AF=0.241;AN=54;BaseQRankSum=4.220;DP=662;FS=8.444;HRun=0;HaplotypeScore=99.0890;InbreedingCoeff=0.5022;MQ=56.61;MQ0=14;MQRankSum=2.795;QD=5.17;ReadPosRankSum=1.635;VQSLOD=1.6960;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,39:58:32.96:391,33,0	0/0:6,0:9:13.23:0,13,105	./.	0/0:29,0:13:3.01:0,3,47	0/0:7,0:22:8.48:0,8,47	0/0:25,1:26:23.82:0,24,746	0/0:26,5:31:12.62:0,13,628	0/0:37,0:36:27.96:0,28,818	0/0:3,0:19:23.72:0,24,190	1/1:9,11:20:33.08:376,33,0	1/1:4,15:20:23.90:263,24,0	0/0:4,0:21:5.94:0,6,44	0/0:2,0:12:20.49:0,20,155	0/0:2,0:17:17.49:0,17,128	0/0:17,0:19:23.99:0,24,222	0/0:4,0:18:29.65:0,30,260	0/1:9,0:21:1.04:1,0,44	1/1:7,21:27:11.02:464,11,0	0/0:10,0:8:3.01:0,3,45	0/0:23,1:24:15.22:0,15,667	0/1:51,4:55:40.06:40,0,1394	0/0:12,0:12:26.83:0,27,386	0/1:13,0:13:0.93:1,0,65	0/1:40,0:40:7.08:7,0,99	0/0:21,0:21:32.71:0,33,509	0/0:26,1:27:32.62:0,33,769	0/1:12,1:13:2.41:2,0,433	0/0:15,0:15:33.11:0,33,523
chr10	38460142	.	G	GC	16851.93	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-17.722;DP=764;FS=0.000;HRun=2;HaplotypeScore=69.6888;InbreedingCoeff=0.9978;MQ=89.75;MQ0=0;MQRankSum=-3.691;QD=39.01;ReadPosRankSum=4.762;VQSLOD=5.0361;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,53:56:99:2159,151,0	1/1:1,12:13:33.11:475,33,0	0/0:27,0:27:75.23:0,75,924	0/0:32,0:32:84.23:0,84,1004	1/1:1,18:19:54.18:778,54,0	0/0:23,0:23:63.18:0,63,768	0/0:37,0:37:99:0,102,1251	0/0:25,0:25:69.20:0,69,834	1/1:3,25:28:72.24:1036,72,0	1/1:2,35:37:99:1494,105,0	1/1:1,12:13:36.12:515,36,0	1/1:1,28:29:78.26:1123,78,0	1/1:1,27:28:78.26:1122,78,0	1/1:1,30:31:90.30:1295,90,0	1/1:3,31:34:78.26:1123,78,0	1/1:1,31:33:87.29:1253,87,0	1/1:0,30:30:81.27:1166,81,0	1/1:2,28:30:84.28:1209,84,0	0/0:22,0:22:66.20:0,66,803	0/0:18,0:18:54.17:0,54,669	0/0:52,0:52:99:0,144,1772	0/0:20,0:20:57.18:0,57,707	1/1:0,24:24:66.22:950,66,0	1/1:0,26:27:81.27:1153,81,0	0/0:23,0:23:69.22:0,69,855	0/0:34,0:34:96.30:0,96,1180	0/0:14,0:14:42.13:0,42,521	0/0:5,0:5:15.05:0,15,186
chr10	38462139	.	C	CAGAGAGAGAG	377.37	PASS	AB=0.917;AC=7;AF=0.125;AN=56;BaseQRankSum=5.653;DP=521;FS=31.449;HRun=0;HaplotypeScore=159.8501;InbreedingCoeff=-0.1777;MQ=44.59;MQ0=26;MQRankSum=-2.502;QD=3.14;ReadPosRankSum=-1.768;VQSLOD=0.5234;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:21,0:21:6.43:6,0,158	0/1:9,0:8:65.39:65,0,130	0/0:10,0:2:5.99:0,6,71	0/0:12,0:2:3.01:0,3,37	0/0:22,0:20:18.49:0,18,338	0/0:15,0:13:33.98:0,34,822	0/0:29,0:26:57.02:0,57,1717	0/0:27,0:27:72.71:0,73,1716	0/1:22,0:21:90.95:91,0,251	0/0:20,0:19:17.67:0,18,783	0/0:17,0:15:6:0,6,111	0/0:21,0:18:8.55:0,9,179	0/1:5,5:10:75.10:75,0,213	0/0:16,0:14:3.01:0,3,75	0/1:14,0:14:57.90:58,0,244	0/1:18,4:24:99:109,0,344	0/1:17,0:16:97.82:98,0,342	0/0:20,0:19:14.12:0,14,333	0/0:11,0:10:24.08:0,24,663	0/0:15,0:15:21.16:0,21,451	0/0:25,0:23:39.13:0,39,1163	0/0:25,0:25:50.56:0,51,1486	0/0:20,0:19:12.03:0,12,285	0/0:27,0:23:5.50:0,5,171	0/0:19,0:19:39.38:0,39,1142	0/0:27,0:25:69.71:0,70,2076	0/0:15,0:14:27.09:0,27,631	0/0:8,0:7:10.45:0,10,330
chr10	38462143	.	C	CAGAGAGAGAG	1280.32	PASS	AB=0.968;AC=11;AF=0.196;AN=56;BaseQRankSum=3.636;DP=508;FS=19.766;HRun=0;HaplotypeScore=153.7611;InbreedingCoeff=-0.0409;MQ=44.59;MQ0=26;MQRankSum=-1.429;QD=7.49;ReadPosRankSum=-0.892;VQSLOD=1.0473;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:22:43.77:44,0,50	1/1:9,0:8:2.14:105,2,0	0/0:7,0:2:6.02:0,6,162	0/0:8,0:3:6.02:0,6,104	0/0:21,0:19:7.52:0,8,33	0/0:17,0:15:36.52:0,37,778	0/0:29,0:26:57:0,57,1493	0/0:27,0:27:75.12:0,75,1176	0/1:21,0:20:56.37:126,0,56	0/1:12,0:19:99:139,0,379	0/0:15,0:13:3.01:0,3,48	0/0:8,10:17:0.92:0,1,6	0/1:9,0:9:9.93:135,0,10	0/0:8,0:13:2.50:0,2,9	0/1:14,0:14:4.51:178,0,5	0/1:24,0:21:52.64:346,0,53	0/1:17,0:16:66.01:239,0,66	0/1:16,0:15:71.74:72,0,92	0/0:12,0:11:24.08:0,24,681	0/0:15,0:15:21.54:0,22,485	0/0:26,0:24:39.61:0,40,1068	0/0:25,0:25:50.55:0,51,1461	0/1:19,0:18:5.41:37,0,5	0/0:26,0:22:3.11:0,3,10	0/0:21,0:21:45.15:0,45,1335	0/0:28,0:26:75.68:0,76,1954	0/0:15,0:14:26.88:0,27,582	0/0:8,0:7:13.43:0,13,335
chr10	38462145	.	C	CAGAGAGAGAGAG	1684.29	PASS	AB=1.000;AC=16;AF=0.286;AN=56;BaseQRankSum=2.589;DP=497;FS=12.896;HRun=0;HaplotypeScore=160.2138;InbreedingCoeff=0.3460;MQ=44.66;MQ0=26;MQRankSum=-1.396;QD=9.20;ReadPosRankSum=-1.153;VQSLOD=1.9888;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:22:5.96:66,0,6	1/1:9,0:8:2.80:99,3,0	0/0:8,0:3:6.02:0,6,189	0/0:7,0:2:6.02:0,6,159	0/0:21,0:19:7.11:0,7,25	0/0:16,0:14:33.08:0,33,719	0/0:28,0:25:56.76:0,57,1361	0/0:27,0:27:68.81:0,69,949	1/1:21,0:20:5.65:235,6,0	0/1:20,0:19:99:258,0,154	0/0:15,0:13:2.99:0,3,24	1/1:17,0:14:3.47:27,3,0	1/1:9,0:9:3.68:179,4,0	0/0:14,0:11:1.25:0,1,3	1/1:13,0:13:4.59:208,5,0	0/1:21,0:18:11.93:374,0,12	0/1:17,0:16:1.79:282,0,2	0/1:15,0:14:14.97:98,0,15	0/0:12,0:11:27.01:0,27,660	0/0:15,0:15:21.07:0,21,456	0/0:26,0:24:40.87:0,41,955	0/0:25,0:25:47.66:0,48,1532	0/1:19,0:18:2.61:14,0,3	0/0:12,9:24:3.54:0,4,9	0/0:21,0:21:50.93:0,51,1550	0/0:28,0:26:78.03:0,78,1683	0/0:15,0:14:23.57:0,24,611	0/0:8,0:7:14.32:0,14,331
chr10	38462147	.	C	CATAGAGAGAGAG	2868.24	PASS	AB=0.922;AC=14;AF=0.259;AN=54;BaseQRankSum=-0.332;DP=536;FS=9.822;HRun=0;HaplotypeScore=181.1311;InbreedingCoeff=-0.1140;MQ=44.95;MQ0=25;MQRankSum=-3.336;QD=11.61;ReadPosRankSum=-1.486;VQSLOD=1.6843;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:2,15:22:16.93:84,0,17	0/1:14,0:13:40.09:156,0,40	0/0:10,0:4:12.02:0,12,225	0/0:8,0:4:5.39:0,5,203	0/0:25,0:23:14.81:0,15,103	0/0:15,0:13:21.07:0,21,597	0/0:29,0:27:18.52:0,19,1136	0/0:28,0:28:43.51:0,44,903	0/1:21,0:20:50.46:190,0,50	1/1:21,0:20:44.79:856,45,0	./.	0/1:20,0:17:21.44:166,0,21	0/1:14,0:14:46.70:427,0,47	0/1:18,0:15:15.70:87,0,16	0/1:15,0:15:93.39:205,0,93	0/1:26,0:23:58.26:365,0,58	0/1:18,0:17:93.19:335,0,93	0/1:4,8:14:4.35:137,0,4	0/0:12,0:11:29.75:0,30,575	0/1:16,0:16:2.79:3,0,291	0/0:26,0:24:21.02:0,21,768	0/0:26,0:26:44.68:0,45,1407	0/0:21,0:20:11.96:0,12,92	0/1:26,0:23:15.51:16,0,38	0/0:21,0:21:47.95:0,48,1496	0/0:28,0:26:54.56:0,55,1276	0/0:14,0:13:27.21:0,27,482	0/0:10,0:9:12.09:0,12,303
chr10	38463654	.	GT	G	4221.33	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=9.150;DP=556;FS=2.537;HRun=11;HaplotypeScore=82.6870;InbreedingCoeff=0.9944;MQ=74.76;MQ0=0;MQRankSum=-2.611;QD=19.73;ReadPosRankSum=5.279;VQSLOD=5.4223;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:33:59.80:0,60,309	1/1:0,14:15:41.60:344,42,0	0/0:18,0:16:14.96:0,15,130	0/0:7,0:6:15.01:0,15,145	1/1:4,22:26:68.90:563,69,0	0/0:14,0:15:34.97:0,35,378	0/0:15,0:15:42.08:0,42,434	0/0:34,0:35:68.05:0,68,700	1/1:2,28:30:74.90:616,75,0	0/0:2,0:25:65.47:0,65,355	0/0:4,0:21:48.49:0,48,249	1/1:2,12:14:23.96:197,24,0	1/1:2,17:19:53.91:440,54,0	1/1:1,17:18:41.95:345,42,0	1/1:4,20:24:50.93:419,51,0	1/1:1,17:18:47.94:394,48,0	1/1:1,16:18:41.21:314,41,0	0/0:2,0:16:34.97:0,35,172	0/0:9,0:11:26.73:0,27,252	0/0:27,0:27:72.18:0,72,768	0/0:10,0:10:30.03:0,30,296	0/0:19,0:19:47.79:0,48,490	1/1:3,18:21:47.94:394,48,0	1/1:1,10:11:23.97:197,24,0	0/0:17,0:17:43.34:0,43,443	0/0:29,0:30:72:0,72,737	0/0:24,0:24:63.13:0,63,657	0/0:18,1:19:29.29:0,29,488
chr10	38464875	.	TACAC	T	3451.67	PASS	AB=0.729;AC=32;AF=0.593;AN=54;BaseQRankSum=-0.281;DP=544;FS=0.521;HRun=0;HaplotypeScore=111.3856;InbreedingCoeff=0.4030;MQ=57.83;MQ0=11;MQRankSum=0.169;QD=9.28;ReadPosRankSum=-0.958;VQSLOD=2.2385;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:31,8:38:41.63:555,42,0	0/1:6,1:13:16:39,0,16	0/0:21,0:10:0:0,0,0	./.	0/1:15,1:16:17.23:17,0,441	0/0:18,0:16:30.08:0,30,607	0/0:16,0:17:17.80:0,18,335	1/1:26,0:23:5.29:32,5,0	0/0:7,0:21:35.94:0,36,180	1/1:6,13:20:38.38:451,38,0	1/1:8,6:15:18.05:262,18,0	1/1:7,14:21:26.96:423,27,0	0/0:7,0:15:5.96:0,6,25	0/0:14,0:26:3.35:0,3,150	0/0:10,0:19:13.95:0,14,120	0/1:4,2:22:52.06:52,0,119	0/1:3,1:14:24.87:25,0,73	1/1:13,14:27:27.09:426,27,0	1/1:14,0:15:4.90:51,5,0	1/1:7,1:23:25.56:213,26,0	1/1:20,0:19:4.66:18,5,0	0/0:18,0:21:35.38:0,35,548	1/1:12,13:24:17.69:269,18,0	1/1:11,12:23:21.07:331,21,0	0/1:14,1:15:20.30:20,0,353	0/1:11,0:17:7.73:111,0,8	1/1:9,0:14:12.48:113,12,0	1/1:4,0:4:6.99:43,7,0
chr10	38465314	.	A	AT	6473.96	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-6.379;DP=567;FS=10.466;HRun=9;HaplotypeScore=58.1989;InbreedingCoeff=0.9530;MQ=80.21;MQ0=0;MQRankSum=-0.878;QD=21.16;ReadPosRankSum=2.271;VQSLOD=5.2166;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,35:41:70.08:984,70,0	1/1:1,11:12:6.97:291,7,0	0/0:15,0:15:29:0,29,236	0/0:17,0:17:29.98:0,30,256	1/1:6,19:24:31.10:571,31,0	0/0:18,0:19:36.13:0,36,429	0/0:19,0:19:50.97:0,51,439	0/0:17,0:17:35.96:0,36,306	1/1:5,16:21:45.12:498,45,0	1/1:8,19:27:54.15:597,54,0	1/1:1,11:12:30.04:318,30,0	1/1:4,1:21:36.69:194,37,0	1/1:5,7:13:20.89:209,21,0	1/1:4,14:19:41.95:446,42,0	1/1:1,18:19:48.13:531,48,0	1/1:4,20:24:57.15:631,57,0	1/1:4,17:21:2.04:479,2,0	1/1:1,9:10:27.07:299,27,0	0/0:24,0:24:53.94:0,54,461	0/0:27,0:27:62.98:0,63,547	0/0:23,0:25:67.06:0,67,559	0/0:19,0:19:44.98:0,45,391	1/1:4,0:22:51.29:268,51,0	1/1:4,0:19:13.88:158,14,0	0/0:14,0:15:12.89:0,13,283	0/0:21,0:21:53.98:0,54,469	0/0:29,0:29:74.91:0,75,638	0/0:14,0:14:41.97:0,42,360
chr10	38465467	.	T	TG	2998.63	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-11.406;DP=520;FS=2.035;HRun=5;HaplotypeScore=51.0626;InbreedingCoeff=0.9940;MQ=91.59;MQ0=0;MQRankSum=-4.288;QD=32.95;ReadPosRankSum=2.444;VQSLOD=4.1976;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,20:23:57.19:750,57,0	0/0:10,0:10:24.05:0,24,250	0/0:22,0:22:57.09:0,57,587	0/0:22,0:22:44.77:0,45,432	0/0:19,0:19:57.11:0,57,593	0/0:26,0:26:72.18:0,72,774	0/0:21,0:21:54.11:0,54,565	0/0:24,0:24:69.16:0,69,735	0/0:17,0:17:42.10:0,42,451	1/1:1,19:20:57.16:717,57,0	1/1:0,29:29:78.25:1026,78,0	0/0:19,0:19:51.11:0,51,538	0/0:15,0:15:39.10:0,39,419	0/0:9,0:9:27.05:0,27,282	0/0:14,0:14:42.09:0,42,443	0/0:12,0:12:30.07:0,30,317	0/0:18,0:18:48.12:0,48,515	1/1:0,19:19:51.16:665,51,0	0/0:21,0:21:63.15:0,63,671	0/0:23,0:23:60.14:0,60,639	0/0:16,0:16:45.11:0,45,484	0/0:14,0:14:39.10:0,39,419	0/0:19,0:19:57.14:0,57,611	0/0:18,0:18:51.13:0,51,547	0/0:11,0:11:30.08:0,30,322	0/0:19,1:20:14.65:0,15,502	0/0:21,0:20:60.15:0,60,645	0/0:18,0:18:54.14:0,54,580
chr10	38465641	.	G	GT	2283.78	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=11.513;DP=636;FS=1.450;HRun=0;HaplotypeScore=83.6535;InbreedingCoeff=0.9915;MQ=77.05;MQ0=0;MQRankSum=0.838;QD=21.55;ReadPosRankSum=-0.285;VQSLOD=5.0917;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,30:32:50.57:676,51,0	0/0:17,0:17:51.17:0,51,712	0/0:16,0:16:32.98:0,33,513	0/0:12,0:11:12.31:0,12,305	0/0:39,0:39:99:0,114,1522	0/0:26,0:26:75.24:0,75,1029	0/0:17,0:17:48.16:0,48,671	0/0:37,0:37:99:0,111,1500	0/0:28,0:28:84.27:0,84,1155	1/1:7,24:31:77.87:852,78,0	1/1:4,20:24:30.13:547,30,0	0/0:17,0:17:51.17:0,51,712	0/0:18,0:18:51.04:0,51,636	0/0:19,0:19:57.17:0,57,760	0/0:19,0:19:54.18:0,54,755	0/0:19,0:19:57.15:0,57,759	0/0:36,0:36:99:0,102,1360	1/1:8,10:18:28.20:368,28,0	0/0:21,0:21:63.20:0,63,861	0/0:29,0:29:87.29:0,87,1210	0/0:13,0:13:39.12:0,39,525	0/0:21,0:21:63.20:0,63,856	0/0:13,0:13:39.13:0,39,541	0/0:30,0:30:90.26:0,90,1236	0/0:15,0:15:45.14:0,45,613	0/0:20,0:20:60.19:0,60,820	0/0:30,0:29:87.26:0,87,1174	0/0:18,0:18:54.17:0,54,738
chr10	38466194	.	AT	A	7414.88	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=13.347;DP=635;FS=4.620;HRun=9;HaplotypeScore=65.0772;InbreedingCoeff=0.9991;MQ=71.18;MQ0=0;MQRankSum=0.774;QD=22.89;ReadPosRankSum=4.179;VQSLOD=5.7673;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,33:35:86.84:782,87,0	1/1:2,9:11:24.01:220,24,0	0/0:16,0:16:36.07:0,36,385	0/0:15,0:14:21.70:0,22,216	1/1:2,22:24:63.02:577,63,0	0/0:20,0:20:60.18:0,60,692	0/0:22,1:23:29.71:0,30,596	0/0:39,0:39:99:0,99,1105	1/1:0,17:17:42.02:384,42,0	1/1:2,24:26:72.04:658,72,0	1/1:1,12:13:33.01:302,33,0	1/1:1,19:20:51.03:467,51,0	1/1:2,25:27:66.04:604,66,0	1/1:6,18:24:51.02:467,51,0	1/1:1,21:22:60.03:549,60,0	1/1:2,12:14:36.02:330,36,0	1/1:2,27:29:69.04:632,69,0	1/1:3,20:23:52.18:539,52,0	0/0:16,0:16:42.12:0,42,485	0/0:22,0:22:63.19:0,63,727	0/0:30,0:30:84.23:0,84,950	0/0:20,0:20:57.16:0,57,650	1/1:2,17:19:44.56:411,45,0	1/1:1,19:20:54.03:494,54,0	0/0:23,0:23:60.18:0,60,692	0/0:34,0:34:87.22:0,87,990	0/0:31,0:29:93.28:0,93,1072	0/0:22,0:22:66.20:0,66,762
chr10	38467956	.	CTT	C	2982.58	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=2.943;DP=412;FS=21.410;HRun=10;HaplotypeScore=57.2020;InbreedingCoeff=0.9625;MQ=65.81;MQ0=4;MQRankSum=2.509;QD=21.77;ReadPosRankSum=5.784;VQSLOD=0.8192;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:1,0:22:30.76:0,31,125	1/1:1,11:11:33.09:367,33,0	0/0:16,0:15:16.95:0,17,208	0/0:9,0:7:4.26:0,4,51	1/1:1,7:8:18.03:200,18,0	0/0:15,0:15:39.10:0,39,555	0/0:4,0:5:8.52:0,9,104	0/0:26,0:26:63.14:0,63,874	1/1:3,8:11:21.05:234,21,0	0/0:1,0:19:41.84:0,42,147	0/0:2,0:15:27.93:0,28,107	1/1:0,19:18:42.11:468,42,0	1/1:1,10:11:24.06:267,24,0	1/1:1,8:7:21.06:234,21,0	1/1:2,16:18:33.08:367,33,0	1/1:1,11:12:30.08:334,30,0	1/1:1,13:14:21.05:234,21,0	0/0:2,0:14:27.32:0,27,94	0/0:15,0:15:27.07:0,27,367	0/0:18,0:18:42.13:0,42,625	0/0:8,0:8:18.02:0,18,242	0/0:12,0:13:29.38:0,29,402	1/1:2,11:13:26.89:300,27,0	1/1:3,6:9:18.05:200,18,0	0/0:26,0:26:62.60:0,63,863	0/0:19,0:19:48.13:0,48,698	0/0:12,0:12:26.81:0,27,342	0/0:22,0:22:61.41:0,61,868
chr10	38469782	.	G	GGGA	25010.25	PASS	AB=0.941;AC=31;AF=0.554;AN=56;BaseQRankSum=-1.948;DP=762;FS=7.275;HRun=0;HaplotypeScore=136.8624;InbreedingCoeff=0.9277;MQ=73.34;MQ0=2;MQRankSum=-4.366;QD=55.58;ReadPosRankSum=2.496;VQSLOD=6.6438;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,61:66:99:3843,169,0	1/1:1,12:13:33.11:778,33,0	0/0:24,0:22:60.20:0,60,1046	0/0:24,0:24:66.04:0,66,1068	1/1:2,19:21:50.84:1198,51,0	0/0:20,0:20:60.18:0,60,1014	0/0:30,0:30:90.31:0,90,1587	0/0:31,0:31:90.31:0,90,1585	1/1:3,25:29:75.23:1770,75,0	1/1:2,24:26:72.25:1701,72,0	1/1:2,21:23:54.16:1273,54,0	1/1:2,32:35:93.01:2194,93,0	1/1:1,20:21:60.21:1412,60,0	1/1:1,29:31:84.29:1979,84,0	1/1:1,21:22:63.22:1453,63,0	1/1:1,20:22:60.21:1386,60,0	1/1:4,32:37:93.32:2197,93,0	1/1:1,26:27:72.25:1702,72,0	0/0:23,0:23:48.25:0,48,1136	0/0:20,0:20:60.16:0,60,973	0/0:68,0:68:99:0,205,3566	0/0:22,0:22:66.23:0,66,1164	1/1:2,17:20:51.17:1163,51,0	1/1:1,20:25:38.48:912,38,0	0/0:19,0:19:57.20:0,57,1001	0/1:30,2:32:51.50:51,0,1392	0/0:14,0:14:39.60:0,40,685	0/0:16,0:16:45.15:0,45,794
chr10	38471735	.	CAG	C	818.19	PASS	AB=0.921;AC=18;AF=0.360;AN=50;BaseQRankSum=-5.080;DP=529;FS=29.456;HRun=0;HaplotypeScore=102.9329;InbreedingCoeff=0.6365;MQ=71.92;MQ0=9;MQRankSum=4.086;QD=4.50;ReadPosRankSum=-0.187;VQSLOD=1.2137;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:2.38:0,2,61	./.	./.	0/0:34,0:18:0:0,0,0	0/0:23,0:23:13.56:0,14,136	1/1:8,4:12:11.60:92,12,0	1/1:17,2:20:12.82:141,13,0	0/1:25,0:25:2.80:3,0,27	0/0:24,0:23:9.50:0,9,108	0/0:19,0:17:18.53:0,19,228	0/0:14,0:13:7.83:0,8,72	0/0:21,0:21:25.88:0,26,277	0/0:16,0:16:18.15:0,18,127	0/0:23,0:23:1.52:0,2,5	0/0:19,0:17:12.03:0,12,152	0/0:17,0:17:11.55:0,12,78	0/0:24,0:21:11.50:0,11,86	0/0:14,0:14:11.46:0,11,111	./.	0/1:13,1:16:61.94:62,0,72	1/1:17,2:20:8.85:80,9,0	1/1:18,0:18:6:57,6,0	0/0:15,0:15:7.71:0,8,54	0/0:15,0:14:13.82:0,14,115	1/1:10,4:15:14.87:146,15,0	1/1:15,4:20:11.86:113,12,0	1/1:19,8:28:29.58:273,30,0	1/1:6,0:6:2.99:24,3,0
chr10	38471776	.	AAT	A	5323.84	PASS	AB=1.000;AC=31;AF=0.554;AN=56;BaseQRankSum=6.399;DP=523;FS=20.757;HRun=0;HaplotypeScore=104.2099;InbreedingCoeff=0.8671;MQ=65.72;MQ0=10;MQRankSum=-2.056;QD=17.69;ReadPosRankSum=-1.080;VQSLOD=3.0734;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:23,1:25:38.54:560,39,0	1/1:6,0:6:8.76:66,9,0	0/1:16,0:10:15.04:15,0,185	0/0:20,0:14:2.02:0,2,311	1/1:20,0:19:30.24:261,30,0	0/0:19,0:18:34.71:0,35,676	0/0:17,0:17:7.10:0,7,480	0/0:27,0:27:70.96:0,71,1169	1/1:18,0:17:17.60:144,18,0	1/1:20,1:20:49.63:641,50,0	1/1:12,0:10:21.05:301,21,0	1/1:28,3:32:65.65:805,66,0	1/1:17,0:17:39.45:335,39,0	1/1:18,0:18:23.59:212,24,0	1/1:20,0:18:19.11:107,19,0	1/1:16,0:16:32.42:234,32,0	1/1:29,0:26:28.09:291,28,0	1/1:14,1:16:44.05:565,44,0	0/0:15,0:15:40.91:0,41,629	0/0:20,0:20:52.06:0,52,833	0/0:24,0:24:51.11:0,51,850	0/0:14,0:14:35.10:0,35,537	1/1:18,1:19:38.21:547,38,0	1/1:15,0:14:22.86:242,23,0	0/0:16,0:16:40.73:0,41,579	0/0:15,0:15:44.96:0,45,652	0/0:28,0:27:68.75:0,69,939	0/0:6,0:4:7.72:0,8,118
chr10	38471777	.	ATG	A	4301.88	PASS	AB=0.860;AC=26;AF=0.464;AN=56;BaseQRankSum=6.888;DP=526;FS=4.703;HRun=0;HaplotypeScore=107.6507;InbreedingCoeff=0.5268;MQ=65.96;MQ0=10;MQRankSum=-2.299;QD=14.34;ReadPosRankSum=0.030;VQSLOD=4.2514;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:25:16.63:232,17,0	1/1:0,6:6:8.84:147,9,0	0/1:16,0:10:32.62:33,0,228	0/0:20,0:14:15.37:0,15,377	1/1:11,9:19:20.54:463,21,0	0/0:20,0:19:50.76:0,51,934	0/0:16,0:16:43.72:0,44,715	0/0:29,0:29:84.11:0,84,1559	0/1:6,11:16:13.33:230,0,13	0/1:24,0:23:55.95:197,0,56	1/1:12,0:10:17.83:127,18,0	0/1:30,0:31:17.02:277,0,17	1/1:9,8:17:30.59:599,31,0	1/1:8,9:17:27.48:380,27,0	0/1:10,10:18:12.75:175,0,13	1/1:9,7:16:27.05:411,27,0	1/1:6,22:25:13.40:525,13,0	0/1:16,0:17:11.71:200,0,12	0/0:15,0:15:44.86:0,45,787	0/0:21,0:21:60.15:0,60,1137	0/0:24,0:24:62.94:0,63,1137	0/0:14,0:14:39.12:0,39,724	1/1:19,0:19:32.37:252,32,0	1/1:14,0:13:1.64:55,2,0	0/0:16,0:16:48.09:0,48,793	0/0:16,0:16:48.16:0,48,873	0/0:28,0:27:78.06:0,78,1304	0/0:6,0:4:8.96:0,9,143
chr10	38471779	.	G	GAGAGAGAGAA	2918.18	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=8.648;DP=527;FS=17.596;HRun=0;HaplotypeScore=198.3656;InbreedingCoeff=0.4448;MQ=67.77;MQ0=8;MQRankSum=-3.997;QD=10.28;ReadPosRankSum=-5.779;VQSLOD=-0.3272;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:26:99:124,0,199	1/1:6,0:6:5.14:54,5,0	0/0:18,0:12:29.47:0,29,391	0/0:23,0:16:30.01:0,30,536	1/1:19,0:19:23.85:203,24,0	0/0:21,0:20:51.17:0,51,1544	0/0:16,0:16:45.15:0,45,1282	0/0:29,0:29:81.24:0,81,2119	1/1:19,0:18:13.23:163,13,0	0/1:24,0:23:99:145,0,292	0/1:11,0:9:30.54:31,0,59	0/1:32,0:31:97.35:97,0,245	1/1:16,1:17:30.23:501,30,0	1/1:17,0:17:25.37:279,25,0	1/1:19,0:18:16.85:232,17,0	1/1:15,1:16:23.48:392,23,0	1/1:26,2:25:38.73:663,39,0	0/1:19,0:19:99:117,0,213	0/0:17,0:17:36.12:0,36,1020	0/0:20,0:20:57.20:0,57,1543	0/0:23,0:23:60.20:0,60,1797	0/0:14,0:14:42.11:0,42,1228	0/1:15,0:15:61.20:61,0,178	0/1:14,0:14:43.48:57,0,43	0/0:16,0:16:45.13:0,45,1297	0/0:16,0:16:45.15:0,45,1198	0/0:26,0:25:72.25:0,72,2181	0/0:4,0:3:6.02:0,6,196
chr10	38473071	.	AGTGTGTGTGTGTGT	A	2247.03	PASS	AB=0.719;AC=17;AF=0.304;AN=56;BaseQRankSum=6.555;DP=715;FS=6.424;HRun=0;HaplotypeScore=234.1235;InbreedingCoeff=0.7786;MQ=67.06;MQ0=43;MQRankSum=-5.177;QD=14.40;ReadPosRankSum=2.183;VQSLOD=1.3649;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:32:21.99:0,22,1494	1/1:3,5:9:8.94:155,9,0	0/0:93,0:29:25.64:0,26,604	0/0:108,0:33:12.70:0,13,409	1/1:13,4:18:3:25,3,0	0/0:11,0:11:6.02:0,6,354	0/0:37,0:35:38.36:0,38,1230	0/0:32,0:31:17.27:0,17,660	1/1:18,2:25:25.70:614,26,0	0/0:19,0:17:15.05:0,15,614	0/0:21,0:20:32.44:0,32,1088	1/1:9,1:13:5.02:138,5,0	1/1:8,6:15:18.02:590,18,0	1/1:9,8:18:6.96:227,7,0	0/1:14,7:23:0:0,0,0	1/1:10,8:19:15.01:469,15,0	1/1:8,5:12:4.37:205,4,0	0/0:11,0:10:18.03:0,18,725	0/0:17,0:17:18.43:0,18,656	0/0:24,0:22:23.99:0,24,1053	0/0:23,0:20:21.06:0,21,951	0/0:19,0:18:30.10:0,30,1503	0/0:14,0:16:0:0,0,0	0/0:17,0:21:0:0,0,0	0/0:18,0:17:21.05:0,21,934	0/0:30,0:28:36.12:0,36,1741	0/0:15,0:15:30.47:0,30,1115	0/0:9,0:6:6.47:0,6,121
chr10	38473117	.	T	TGTGAGA	5927.07	PASS	AB=1.000;AC=34;AF=0.630;AN=54;BaseQRankSum=-3.139;DP=549;FS=150.900;HRun=0;HaplotypeScore=167.6577;InbreedingCoeff=-0.4225;MQ=43.51;MQ0=27;MQRankSum=3.509;QD=10.82;ReadPosRankSum=-0.155;VQSLOD=-0.4049;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:25:99:295,0,145	0/1:13,0:13:2.60:108,0,3	0/0:1,0:1:3.01:0,3,45	./.	1/1:19,0:18:23.17:368,23,0	0/1:17,0:17:57.28:204,0,57	0/1:32,0:30:99:239,0,112	1/1:29,0:28:20.27:208,20,0	0/1:24,0:24:45.99:128,0,46	0/1:26,0:23:27.40:625,0,27	0/1:17,0:15:70.90:175,0,71	0/1:18,0:17:10.07:66,0,10	0/1:22,0:22:29.61:177,0,30	0/1:24,0:24:1.02:303,0,1	1/1:32,0:31:27.95:457,28,0	0/1:27,0:25:9.95:381,0,10	0/1:19,0:18:6.57:215,0,7	0/1:9,0:8:34.98:169,0,35	1/1:7,0:6:4.25:30,4,0	0/1:22,0:19:7.18:131,0,7	1/1:21,0:18:0.24:221,0,0	0/1:25,0:25:19.56:20,0,183	0/1:16,0:15:0.99:91,0,1	1/1:26,0:25:24.02:367,24,0	0/1:18,0:16:35.70:331,0,36	0/1:22,0:20:13.08:350,0,13	1/1:12,4:21:9.15:72,9,0	1/1:13,0:8:15.73:195,16,0
chr10	38474084	.	GGAAT	G	5188.86	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=13.218;DP=665;FS=0.000;HRun=0;HaplotypeScore=109.4993;InbreedingCoeff=0.9998;MQ=95.79;MQ0=0;MQRankSum=-2.104;QD=45.12;ReadPosRankSum=4.309;VQSLOD=5.5045;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,45:46:99:2278,120,0	0/0:10,0:10:30.10:0,30,795	0/0:30,0:30:81.28:0,81,1981	0/0:34,0:34:90.31:0,90,2143	0/0:15,0:15:45.15:0,45,1184	0/0:19,0:19:54.18:0,54,1457	0/0:21,0:21:60.17:0,60,1432	0/0:28,0:28:78.26:0,78,1934	0/0:22,0:22:63.19:0,63,1641	1/1:2,21:23:60.21:1125,60,0	1/1:1,20:21:45.11:817,45,0	0/0:27,0:27:78.25:0,78,1966	0/0:14,0:14:42.14:0,42,990	0/0:26,0:26:72.25:0,72,1891	0/0:30,0:30:90.31:0,90,2369	0/0:18,0:18:54.18:0,54,1328	0/0:25,0:25:72.25:0,72,1906	1/1:2,23:25:51.17:968,51,0	0/0:25,0:25:63.21:0,63,1675	0/0:21,0:21:54.19:0,54,1423	0/0:29,0:29:87.30:0,87,2317	0/0:28,0:28:81.28:0,81,2104	0/0:16,0:16:45.15:0,45,1208	0/0:18,0:18:51.17:0,51,1285	0/0:19,0:19:57.20:0,57,1518	0/0:34,0:34:93.32:0,93,2351	0/0:24,0:23:69.24:0,69,1721	0/0:17,0:17:51.17:0,51,1302
chr10	38474769	.	G	GAGGA	12471.46	PASS	AB=1.000;AC=26;AF=0.464;AN=56;BaseQRankSum=16.059;DP=715;FS=8.362;HRun=0;HaplotypeScore=151.8092;InbreedingCoeff=0.6973;MQ=51.96;MQ0=10;MQRankSum=-12.938;QD=34.64;ReadPosRankSum=1.042;VQSLOD=4.4572;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:33:99:148,0,153	1/1:2,5:7:5.94:146,6,0	0/0:41,0:16:33.11:0,33,544	0/0:45,0:17:26.32:0,26,357	1/1:23,2:27:70.25:1260,70,0	0/0:27,0:27:78.24:0,78,1273	0/0:28,0:28:66.21:0,66,1076	0/0:35,0:35:62.39:0,62,1057	1/1:18,4:25:60.21:1331,60,0	0/1:34,0:34:99:422,0,127	0/1:16,0:16:95.72:205,0,96	1/1:21,3:26:69.22:1506,69,0	1/1:17,1:19:39.12:814,39,0	1/1:23,3:28:78.26:1756,78,0	1/1:32,0:32:42.13:905,42,0	1/1:26,0:29:81.25:1640,81,0	1/1:25,0:27:45.13:893,45,0	0/1:14,0:14:61.34:72,0,61	0/0:14,0:14:27.07:0,27,432	0/0:17,0:17:45.15:0,45,760	0/0:27,0:27:63.19:0,63,1029	0/0:31,0:31:84.24:0,84,1315	1/1:19,0:19:42.11:859,42,0	1/1:11,12:24:24.01:516,24,0	0/0:16,0:16:45.15:0,45,759	0/0:32,0:32:61.64:0,62,1212	0/0:19,0:19:45.13:0,45,709	0/0:21,0:21:48.16:0,48,817
chr10	38474782	.	A	AGG	3504.27	PASS	AB=0.738;AC=17;AF=0.304;AN=56;BaseQRankSum=12.837;DP=683;FS=11.340;HRun=0;HaplotypeScore=164.0123;InbreedingCoeff=0.5594;MQ=52.23;MQ0=7;MQRankSum=-10.684;QD=14.19;ReadPosRankSum=5.629;VQSLOD=2.9227;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:25.95:0,26,427	1/1:3,1:4:5.99:56,6,0	0/0:36,0:17:32.12:0,32,700	0/0:39,0:18:39.06:0,39,554	0/1:11,15:26:99:286,0,113	0/0:34,0:34:99:0,102,1610	0/0:28,0:28:84.29:0,84,1364	0/0:28,0:28:84.29:0,84,1365	1/1:16,8:24:13.99:417,14,0	0/0:33,0:33:79.45:0,79,710	0/0:16,0:16:27.42:0,27,299	1/1:15,10:25:22.95:465,23,0	0/1:9,6:16:11.80:301,0,12	0/1:18,9:27:10.10:489,0,10	1/1:19,12:31:30.82:392,31,0	1/1:15,13:28:29:495,29,0	0/1:21,6:27:99:171,0,153	0/0:12,0:12:23.71:0,24,224	0/0:16,0:16:45.15:0,45,727	0/0:20,0:20:60.20:0,60,975	0/0:29,0:29:87.27:0,87,1363	0/0:31,0:31:93.30:0,93,1467	1/1:8,8:16:10.48:310,10,0	0/1:17,6:23:86.91:122,0,87	0/0:19,0:19:57.19:0,57,928	0/0:31,0:31:93.09:0,93,1438	0/0:16,0:16:48.16:0,48,757	0/0:17,0:17:51.17:0,51,831
chr10	38474783	.	A	AAAGAAG	11086.92	PASS	AB=0.888;AC=23;AF=0.411;AN=56;BaseQRankSum=15.764;DP=688;FS=7.128;HRun=0;HaplotypeScore=182.0663;InbreedingCoeff=0.4364;MQ=51.74;MQ0=7;MQRankSum=-14.112;QD=32.70;ReadPosRankSum=7.601;VQSLOD=3.5022;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:32,0:32:99:133,0,158	1/1:3,1:4:6.02:160,6,0	0/0:36,0:18:17.43:0,17,866	0/0:38,0:18:41.03:0,41,649	0/1:11,15:26:15.53:1029,0,16	0/0:34,0:34:99:0,102,2201	0/0:28,0:28:84.28:0,84,1779	0/0:28,0:28:84.28:0,84,1751	1/1:16,8:24:28.43:1212,28,0	0/1:32,0:33:88.95:417,0,89	0/1:16,0:16:90.45:149,0,90	1/1:13,10:24:55.51:1423,56,0	1/1:8,6:16:0.29:814,0,0	1/1:17,9:27:26.09:1239,26,0	1/1:1,11:33:16.10:1061,16,0	1/1:14,13:27:13.74:1381,14,0	0/1:21,6:27:56.57:665,0,57	0/1:12,0:12:66.74:67,0,76	0/0:16,0:16:48.15:0,48,987	0/0:20,0:20:60.19:0,60,1278	0/0:29,0:29:87.22:0,87,1860	0/0:31,0:31:93.27:0,93,1991	1/1:7,8:15:27.42:844,27,0	0/1:17,6:23:7.11:496,0,7	0/0:20,0:20:57.19:0,57,1348	0/0:32,0:32:59.75:0,60,2052	0/0:19,0:19:48.15:0,48,994	0/0:17,0:17:51.17:0,51,1192
chr10	38474796	.	G	GAAGGGAAA	13569.43	PASS	AB=1.000;AC=20;AF=0.357;AN=56;BaseQRankSum=9.487;DP=667;FS=0.000;HRun=0;HaplotypeScore=195.6438;InbreedingCoeff=0.2161;MQ=54.53;MQ0=2;MQRankSum=-14.590;QD=40.15;ReadPosRankSum=3.188;VQSLOD=4.2677;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,27:36:44.60:1631,45,0	0/1:3,0:3:42.11:97,0,42	0/0:31,0:20:54.70:0,55,1115	0/0:24,0:16:29.63:0,30,637	0/1:26,0:28:99:658,0,182	0/0:33,0:33:99:0,99,2534	0/0:22,0:22:63.22:0,63,1685	0/0:33,0:33:99:0,99,2031	0/1:21,0:23:99:700,0,114	1/1:3,34:40:98.63:3599,99,0	1/1:1,18:20:39.13:1360,39,0	0/1:23,0:25:93.77:828,0,94	0/1:15,0:15:38.90:471,0,39	1/1:23,0:25:37.58:976,38,0	0/1:23,0:23:57.18:675,0,57	0/1:24,0:25:99:803,0,130	0/1:24,0:26:99:389,0,278	1/1:3,10:15:11.90:553,12,0	0/0:19,0:19:57.18:0,57,1312	0/0:17,0:17:51.17:0,51,1375	0/0:36,0:36:99:0,108,2571	0/0:25,0:25:75.24:0,75,1884	0/1:13,0:15:36.84:485,0,37	0/1:19,0:19:96.60:345,0,97	0/0:20,0:20:60.21:0,60,1690	0/0:33,0:33:23.79:0,24,2411	0/0:16,0:16:48.16:0,48,1251	0/0:19,0:19:57.18:0,57,1421
chr10	38476379	.	TA	T	5724.40	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=12.479;DP=544;FS=0.000;HRun=9;HaplotypeScore=56.2922;InbreedingCoeff=0.9605;MQ=75.48;MQ0=5;MQRankSum=-1.626;QD=21.68;ReadPosRankSum=3.686;VQSLOD=5.3952;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,26:29:72.03:659,72,0	1/1:0,8:8:12:110,12,0	0/0:18,0:14:19.07:0,19,214	0/0:21,0:16:1.55:0,2,177	1/1:4,20:24:60.03:548,60,0	0/0:17,0:17:45.13:0,45,519	0/0:9,0:9:27.08:0,27,312	0/0:28,0:28:75.20:0,75,846	1/1:2,14:16:39.02:357,39,0	1/1:0,27:27:81.04:741,81,0	1/1:2,17:19:47.95:428,48,0	1/1:0,10:10:27.01:247,27,0	1/1:2,17:19:45.02:412,45,0	1/1:2,14:16:39.02:357,39,0	1/1:1,14:15:33.02:302,33,0	1/1:4,8:12:12:110,12,0	1/1:1,20:21:42.02:384,42,0	1/1:3,19:22:48.03:439,48,0	0/0:25,0:25:66.14:0,66,736	0/0:27,0:27:72.19:0,72,808	0/0:14,0:14:39.12:0,39,450	0/0:12,0:12:30.09:0,30,346	1/1:1,10:11:30.02:274,30,0	1/1:1,14:15:39.02:357,39,0	0/0:39,0:39:99:0,105,1168	0/0:32,1:33:65.76:0,66,977	0/0:21,0:21:57.15:0,57,647	0/0:15,0:15:42.11:0,42,475
chr10	38476766	.	AT	A	4416.39	PASS	AB=1.000;AC=31;AF=0.554;AN=56;BaseQRankSum=9.728;DP=357;FS=1.212;HRun=9;HaplotypeScore=33.9642;InbreedingCoeff=0.9399;MQ=66.97;MQ0=0;MQRankSum=0.058;QD=20.93;ReadPosRankSum=3.211;VQSLOD=4.7888;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,13:14:36.01:329,36,0	1/1:1,7:8:21:192,21,0	0/0:6,0:5:15.04:0,15,173	0/1:5,0:5:3.50:3,0,53	1/1:2,20:22:47.97:432,48,0	0/0:10,0:10:27.07:0,27,302	0/0:15,0:15:42.12:0,42,484	0/0:23,0:23:54.16:0,54,623	1/1:1,17:18:45.02:412,45,0	1/1:1,11:12:33.02:302,33,0	1/1:0,11:11:27.01:247,27,0	1/1:0,14:14:27.01:247,27,0	1/1:4,7:11:18.01:165,18,0	1/1:1,10:11:30.01:274,30,0	1/1:1,12:13:24.01:220,24,0	1/1:4,6:10:18:165,18,0	1/1:3,11:14:30.01:275,30,0	1/1:2,20:22:57.03:522,57,0	0/0:13,0:13:27.08:0,27,312	0/0:17,0:17:39.12:0,39,451	0/0:7,0:7:15.04:0,15,173	0/0:10,0:10:27.07:0,27,303	1/1:3,16:19:48.02:439,48,0	1/1:0,7:7:21.01:192,21,0	0/0:16,0:17:47.97:0,48,534	0/0:12,0:12:30.09:0,30,346	0/0:10,0:10:30.08:0,30,336	0/0:6,0:6:18.05:0,18,208
chr10	38477206	.	A	AG	3192.40	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=1.628;DP=545;FS=1.424;HRun=6;HaplotypeScore=68.3094;InbreedingCoeff=0.9970;MQ=79.63;MQ0=5;MQRankSum=-1.776;QD=24.00;ReadPosRankSum=3.599;VQSLOD=3.5415;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:62.71:0,63,599	1/1:1,8:9:18.06:221,18,0	0/0:56,0:35:36.57:0,37,515	0/0:38,1:24:36.15:0,36,282	1/1:1,20:21:60.07:694,60,0	0/0:18,0:18:45.05:0,45,443	0/0:8,0:8:24:0,24,223	0/0:14,0:14:28.20:0,28,277	1/1:1,16:17:36.11:439,36,0	0/0:28,0:28:72.14:0,72,719	0/0:13,0:13:33.05:0,33,325	0/0:20,0:20:51.08:0,51,507	1/1:2,17:19:33.10:405,33,0	1/1:0,13:13:30.09:365,30,0	1/1:1,19:20:39.12:478,39,0	1/1:3,6:9:24.05:270,24,0	1/1:2,23:25:44.93:529,45,0	0/0:20,0:20:60.09:0,60,600	0/0:24,0:24:57.04:0,57,534	0/0:15,0:15:39.02:0,39,371	0/0:21,0:21:51:0,51,483	0/0:9,0:9:27.04:0,27,266	0/0:14,0:14:30.23:0,30,346	0/0:15,0:15:38.94:0,39,343	0/0:22,0:22:60.09:0,60,596	0/0:26,0:26:72.13:0,72,717	0/0:14,0:14:41.95:0,42,394	0/0:8,0:8:24.05:0,24,243
chr10	38477300	.	G	GCACA	7510.27	PASS	AB=0.810;AC=30;AF=0.556;AN=54;BaseQRankSum=2.180;DP=663;FS=0.000;HRun=0;HaplotypeScore=173.1737;InbreedingCoeff=0.7634;MQ=58.31;MQ0=7;MQRankSum=-2.881;QD=18.50;ReadPosRankSum=0.044;VQSLOD=4.2483;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:25,30:60:0.31:1078,0,0	1/1:8,0:11:12.04:193,12,0	0/0:17,0:4:2.98:0,3,22	./.	1/1:16,3:24:1.23:189,1,0	0/0:24,0:26:63.17:0,63,928	0/0:25,0:25:41.92:0,42,613	0/0:20,0:20:26.99:0,27,291	1/1:18,0:25:27.02:368,27,0	1/1:8,14:26:39.07:766,39,0	1/1:9,0:9:11.97:207,12,0	1/1:9,3:24:23.98:461,24,0	1/1:15,1:22:35.83:610,36,0	1/1:20,0:24:29.07:377,29,0	1/1:13,4:24:30.10:638,30,0	1/1:7,1:19:23.44:363,23,0	1/1:24,3:32:52.78:933,53,0	1/1:18,10:27:55.79:1066,56,0	0/0:16,0:16:19.09:0,19,298	0/0:31,0:33:78.20:0,78,1145	0/0:39,0:48:68.96:0,69,1021	0/0:18,0:19:35.75:0,36,553	0/1:9,0:16:0.54:54,0,1	1/1:14,2:30:5.72:146,6,0	0/0:20,0:21:51.12:0,51,775	0/1:28,2:31:60.08:60,0,1077	0/0:14,0:14:34.67:0,35,533	0/0:5,0:5:15:0,15,216
chr10	38479067	.	GA	G	1341.54	PASS	AB=0.860;AC=18;AF=0.321;AN=56;BaseQRankSum=12.165;DP=542;FS=0.000;HRun=12;HaplotypeScore=64.1916;InbreedingCoeff=0.6400;MQ=74.83;MQ0=0;MQRankSum=-1.640;QD=6.42;ReadPosRankSum=0.105;VQSLOD=1.8391;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:32:52.95:153,53,0	0/0:12,0:12:30.06:0,30,305	0/1:12,2:14:14.13:14,0,187	0/1:6,2:8:8.94:37,0,9	0/0:30,1:33:60.57:0,61,750	0/0:11,0:12:26.89:0,27,258	0/0:17,2:19:1.62:0,2,380	0/0:31,2:33:25.65:0,26,604	0/0:15,1:16:21.83:0,22,390	1/1:3,0:15:24.44:71,24,0	1/1:4,1:12:11.10:47,11,0	1/1:2,18:20:50.79:395,51,0	0/0:21,0:21:51.08:0,51,504	0/0:16,1:17:15.82:0,16,332	0/0:14,0:16:38.90:0,39,370	0/0:12,0:13:29.22:0,29,329	0/0:23,0:23:63.10:0,63,630	1/1:3,0:13:18.32:53,18,0	0/0:12,0:13:22.23:0,22,264	0/0:20,1:21:12.90:0,13,321	0/1:26,4:32:3.12:3,0,659	0/0:12,1:14:6.66:0,7,235	1/1:4,11:16:9.37:213,9,0	1/1:1,25:26:68.73:534,69,0	0/0:27,1:30:47.49:0,47,659	0/0:21,0:24:23.10:0,23,452	0/1:18,2:21:17.25:17,0,233	0/0:13,3:16:12.77:0,13,287
chr10	38479478	.	A	ATT	3728.43	PASS	AB=0.559;AC=27;AF=0.482;AN=56;BaseQRankSum=15.765;DP=594;FS=12.245;HRun=10;HaplotypeScore=118.6405;InbreedingCoeff=0.8354;MQ=77.62;MQ0=0;MQRankSum=-4.528;QD=11.95;ReadPosRankSum=0.177;VQSLOD=0.6007;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:33:59.89:210,60,0	1/1:6,0:12:21.04:210,21,0	0/0:18,0:18:30.44:0,30,329	0/0:22,0:22:20.51:0,21,192	1/1:8,1:26:51.88:505,52,0	0/0:25,0:25:66.13:0,66,671	0/0:18,0:18:50.96:0,51,488	0/0:21,0:23:59.58:0,60,568	1/1:7,1:20:42.06:397,42,0	1/1:2,0:26:28.64:166,29,0	0/1:3,0:22:4.87:101,0,5	0/1:4,0:16:7.55:47,0,8	1/1:6,0:12:21.04:215,21,0	1/1:10,0:15:30.07:316,30,0	1/1:9,1:29:72.13:723,72,0	1/1:6,0:12:17.70:179,18,0	1/1:10,0:23:30.99:291,31,0	0/1:7,0:29:2.74:125,0,3	0/0:19,0:20:47.81:0,48,462	0/0:23,0:23:57.07:0,57,573	0/0:17,0:17:42.09:0,42,427	0/0:27,0:27:61.27:0,61,648	1/1:4,0:18:27.45:97,27,0	1/1:3,0:19:41.96:147,42,0	0/0:17,0:17:42.06:0,42,427	0/0:27,0:26:78.17:0,78,788	0/0:24,0:25:62.82:0,63,622	0/0:19,0:19:51.09:0,51,519
chr10	38480452	.	AC	A	1851.43	PASS	AB=0.650;AC=5;AF=0.089;AN=56;BaseQRankSum=9.513;DP=697;FS=10.106;HRun=1;HaplotypeScore=213.4700;InbreedingCoeff=-0.0836;MQ=67.97;MQ0=1;MQRankSum=-8.548;QD=16.53;ReadPosRankSum=1.608;VQSLOD=2.6295;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:8,15:23:14.71:554,0,15	0/0:12,0:12:33.11:0,33,522	0/0:35,0:33:99:0,99,1483	0/0:32,0:31:56.45:0,56,1099	0/0:24,0:24:29.43:0,29,481	0/0:20,0:20:45.15:0,45,709	0/0:43,0:42:99:0,101,1564	0/0:31,0:30:89.50:0,90,1374	0/0:26,0:26:69.21:0,69,1097	0/1:5,9:14:99:373,0,104	0/1:2,7:9:36.02:70,0,36	0/0:30,0:29:84.20:0,84,1301	0/0:21,0:21:54.17:0,54,838	0/0:32,0:32:72.22:0,72,1114	0/0:21,0:21:48.16:0,48,761	0/0:23,0:23:48.15:0,48,742	0/0:25,0:25:51.87:0,52,818	0/1:8,23:31:30.52:957,0,31	0/0:25,0:24:69.22:0,69,1049	0/0:20,0:20:38.66:0,39,591	0/0:64,0:64:99:0,102,1601	0/0:12,0:12:20.48:0,20,335	0/0:13,0:13:21.07:0,21,332	0/1:31,4:35:14.15:14,0,846	0/0:18,0:18:42.14:0,42,671	0/0:30,0:30:87.28:0,87,1367	0/0:19,0:18:54.18:0,54,862	0/0:9,0:9:24.08:0,24,356
chr10	38480474	.	AC	A	8733.07	PASS	AB=0.736;AC=33;AF=0.589;AN=56;BaseQRankSum=6.948;DP=618;FS=19.520;HRun=1;HaplotypeScore=195.0641;InbreedingCoeff=-0.2685;MQ=64.88;MQ0=0;MQRankSum=-12.713;QD=16.60;ReadPosRankSum=0.591;VQSLOD=3.0783;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:16,13:29:99:318,0,307	1/1:4,6:10:30.10:414,30,0	0/0:18,0:18:38.12:0,38,627	0/0:20,1:19:50.47:0,50,621	1/1:4,16:20:7.61:77,8,0	0/1:10,10:20:99:269,0,380	0/1:22,19:40:99:556,0,761	0/1:23,4:27:88.49:88,0,978	1/1:1,23:24:66.21:897,66,0	0/1:12,6:18:99:196,0,332	0/1:6,4:10:59.92:60,0,141	0/1:19,11:29:99:257,0,808	1/1:1,22:23:63.20:863,63,0	1/1:3,25:28:65.20:886,65,0	1/1:2,13:15:39.11:505,39,0	1/1:0,18:18:54.18:754,54,0	1/1:3,20:23:9.38:678,9,0	0/1:19,9:28:99:277,0,466	0/1:20,9:29:99:317,0,823	0/1:10,5:15:99:113,0,269	0/0:53,0:53:62.46:0,62,881	0/1:8,1:9:24.59:25,0,187	0/1:7,6:13:99:107,0,212	0/1:19,8:27:90.26:90,0,367	0/1:10,6:16:99:154,0,388	0/1:14,10:23:99:330,0,521	0/1:10,9:18:99:320,0,393	0/1:5,5:10:99:182,0,165
chr10	38480485	.	A	AC	13558.06	PASS	AB=0.672;AC=35;AF=0.625;AN=56;BaseQRankSum=3.462;DP=625;FS=8.047;HRun=1;HaplotypeScore=171.8537;InbreedingCoeff=-0.4480;MQ=65.24;MQ0=0;MQRankSum=-11.827;QD=22.26;ReadPosRankSum=5.437;VQSLOD=4.3775;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:12,20:32:99:730,0,183	1/1:0,6:6:18.06:282,18,0	0/0:16,0:16:22.77:0,23,347	0/1:15,1:16:99:101,0,191	1/1:1,20:21:19.14:420,19,0	0/1:8,12:20:99:431,0,240	0/1:17,29:45:99:1024,0,500	0/1:17,7:24:99:296,0,505	1/1:1,22:23:44.46:962,44,0	0/1:9,12:21:99:476,0,172	0/1:5,5:10:54.95:267,0,55	0/1:13,13:25:99:409,0,394	1/1:0,19:19:54.18:843,54,0	1/1:1,25:26:72.24:1126,72,0	1/1:1,17:18:42.14:647,42,0	1/1:2,18:20:54.17:838,54,0	1/1:1,22:23:17.36:823,17,0	0/1:12,19:31:99:779,0,217	0/1:17,17:34:99:689,0,566	0/1:9,6:15:99:262,0,188	0/1:15,5:62:16.35:16,0,345	0/1:8,2:10:78.54:79,0,89	0/1:6,7:13:99:243,0,133	0/1:11,16:27:99:341,0,203	0/1:6,8:14:99:293,0,229	0/1:10,12:21:99:495,0,280	0/1:8,11:18:99:427,0,242	0/1:4,6:10:98.78:260,0,99
chr10	38481025	.	CA	C	1224.81	PASS	AB=0.892;AC=15;AF=0.268;AN=56;BaseQRankSum=5.645;DP=506;FS=24.629;HRun=14;HaplotypeScore=97.2393;InbreedingCoeff=0.6799;MQ=50.28;MQ0=21;MQRankSum=-6.012;QD=7.33;ReadPosRankSum=3.309;VQSLOD=0.7861;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,23:27:40.41:371,40,0	0/0:3,0:3:1.55:0,2,4	0/0:35,0:9:20.74:0,21,147	0/0:44,0:5:5.36:0,5,29	0/0:19,0:21:22.47:0,22,125	0/0:12,0:12:24.02:0,24,220	0/0:13,0:13:19.78:0,20,144	0/0:28,0:28:27.54:0,28,314	0/0:8,0:7:8.27:0,8,38	1/1:8,13:19:32.60:226,33,0	1/1:4,18:22:46.64:314,47,0	1/1:7,2:8:8.77:57,9,0	0/0:11,0:12:12.52:0,13,82	0/0:11,0:11:17.28:0,17,103	0/1:16,0:16:6.39:6,0,46	0/0:9,0:9:10.91:0,11,55	0/0:17,0:17:23.44:0,23,130	1/1:5,11:15:29.69:205,30,0	0/0:18,0:16:26.11:0,26,243	0/0:24,0:25:18.02:0,18,244	0/0:5,0:4:6.47:0,6,53	0/0:15,0:14:17.96:0,18,157	1/1:11,8:17:23.73:164,24,0	0/1:8,5:12:13.40:63,0,13	0/0:13,0:14:20.34:0,20,138	0/1:18,1:18:1.53:2,0,254	0/0:24,0:24:32.24:0,32,330	0/0:14,0:14:11.79:0,12,222
chr10	38481039	.	AC	A	927.44	PASS	AB=0.996;AC=25;AF=0.446;AN=56;BaseQRankSum=7.305;DP=526;FS=4.691;HRun=1;HaplotypeScore=101.9605;InbreedingCoeff=0.2635;MQ=51.69;MQ0=29;MQRankSum=-5.975;QD=2.79;ReadPosRankSum=3.241;VQSLOD=0.0047;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:36,0:31:8.76:9,0,88	1/1:3,0:3:8.40:42,8,0	0/0:48,0:10:17.38:0,17,143	0/1:62,0:12:10.02:10,0,20	1/1:22,0:20:46.40:268,46,0	0/0:11,0:11:29.96:0,30,289	0/1:17,0:16:60.98:61,0,115	0/1:28,1:26:29.79:30,0,418	1/1:9,0:8:18.44:112,18,0	0/0:18,0:17:12.17:0,12,78	0/1:24,0:22:13.57:14,0,49	0/0:9,0:9:4.11:0,4,70	1/1:7,0:7:11.13:52,11,0	1/1:14,1:15:12.65:97,13,0	1/1:11,1:12:24.95:174,25,0	1/1:8,0:7:14.78:70,15,0	1/1:12,1:12:21.88:92,22,0	0/0:16,0:15:1.78:0,2,48	0/0:19,0:16:41.79:0,42,313	0/1:22,0:22:24.62:25,0,262	0/0:7,0:5:5.74:0,6,59	0/0:10,5:14:16.92:0,17,204	0/1:17,0:16:12.28:12,0,65	0/1:12,0:12:8.44:8,0,69	0/0:15,0:14:1.95:0,2,88	0/0:21,0:19:29.73:0,30,385	0/1:23,0:22:40.22:40,0,259	0/0:15,0:14:27.29:0,27,271
chr10	38481047	.	AAAC	A	280.34	PASS	AB=0.899;AC=6;AF=0.107;AN=56;BaseQRankSum=-1.764;DP=525;FS=5.908;HRun=0;HaplotypeScore=120.4280;InbreedingCoeff=-0.0258;MQ=47.77;MQ0=29;MQRankSum=-0.269;QD=3.84;ReadPosRankSum=-5.562;VQSLOD=-0.0309;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:27:70.32:0,70,481	0/1:1,2:3:0.19:90,0,0	0/0:45,0:9:3.58:0,4,75	0/0:62,0:12:13.18:0,13,96	0/1:24,1:23:90.86:91,0,237	0/0:11,0:11:29.95:0,30,387	0/0:17,0:16:20.91:0,21,311	0/0:30,0:27:22.48:0,22,533	0/1:8,2:9:43.54:92,0,44	0/0:20,0:19:52.25:0,52,328	0/0:25,0:23:59.84:0,60,391	0/0:10,0:10:8.89:0,9,35	0/0:6,0:6:7.10:0,7,97	0/1:13,0:13:33.57:34,0,85	0/1:12,0:12:41.45:41,0,63	0/1:10,0:9:54.74:55,0,66	0/0:14,0:13:8.06:0,8,130	0/0:15,0:14:29.51:0,30,208	0/0:18,0:16:15.78:0,16,415	0/0:23,0:23:42.60:0,43,620	0/0:8,0:6:6.02:0,6,84	0/0:14,0:14:15.21:0,15,227	0/0:18,0:18:28.89:0,29,112	0/0:12,0:12:15.74:0,16,57	0/0:16,0:15:23.17:0,23,254	0/0:20,0:18:42.29:0,42,530	0/0:22,0:21:0.14:0,0,473	0/0:15,0:15:41.41:0,41,413
chr10	38481050	.	CA	C	1138.34	PASS	AB=0.958;AC=17;AF=0.304;AN=56;BaseQRankSum=8.285;DP=532;FS=2.076;HRun=16;HaplotypeScore=105.0951;InbreedingCoeff=0.7305;MQ=48.90;MQ0=28;MQRankSum=-5.118;QD=7.30;ReadPosRankSum=6.760;VQSLOD=2.8072;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,21:26:66.32:406,66,0	1/1:3,0:3:6.58:28,7,0	0/0:42,1:9:20.37:0,20,133	0/0:60,1:12:13.25:0,13,115	0/0:25,0:25:17.36:0,17,148	0/0:12,0:12:1.89:0,2,97	0/0:17,0:16:7.50:0,7,208	0/0:28,0:26:13.44:0,13,284	0/0:10,0:9:7.61:0,8,57	1/1:4,15:19:44.09:268,44,0	1/1:7,18:23:58.68:357,59,0	1/1:1,0:12:16.30:47,16,0	0/0:5,0:5:13.64:0,14,65	0/0:12,0:12:5.49:0,5,41	0/0:12,0:12:15.50:0,15,82	0/0:10,0:9:18.47:0,18,96	0/0:13,0:13:29.88:0,30,169	1/1:3,11:13:20.37:125,20,0	0/0:20,0:18:40.16:0,40,298	0/1:20,1:23:7.85:8,0,223	0/0:8,0:6:5.97:0,6,47	0/0:13,0:14:17.28:0,17,115	1/1:4,0:19:24.31:70,24,0	1/1:7,0:12:7.48:23,7,0	0/0:15,0:15:1.92:0,2,130	0/0:24,1:23:5.83:0,6,224	0/0:25,0:24:9.42:0,9,191	0/0:15,0:15:10.04:0,10,148
chr10	38481157	.	GA	G	1721.28	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=8.121;DP=478;FS=3.322;HRun=12;HaplotypeScore=59.0176;InbreedingCoeff=0.7929;MQ=73.81;MQ0=0;MQRankSum=1.234;QD=13.66;ReadPosRankSum=5.418;VQSLOD=3.9554;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,41:47:85.14:834,85,0	0/0:12,0:12:33.04:0,33,323	0/0:13,0:12:11.55:0,12,78	0/0:12,0:12:1.72:0,2,47	0/0:16,0:16:27.04:0,27,268	0/0:14,0:15:15.67:0,16,320	0/0:16,0:17:47.93:0,48,471	0/0:29,1:30:33.85:0,34,512	0/0:10,0:11:24.05:0,24,244	1/1:8,12:19:35.82:279,36,0	1/1:4,20:25:22.37:347,22,0	0/1:10,0:10:2.05:2,0,139	0/0:12,2:14:9.78:0,10,266	0/0:16,0:16:33.02:0,33,318	0/0:14,0:14:30.05:0,30,299	0/0:1,0:1:3.01:0,3,30	0/0:19,2:22:13.47:0,13,475	1/1:5,19:24:53.76:418,54,0	0/0:25,1:28:33.55:0,34,488	0/0:16,0:16:33.06:0,33,329	0/0:12,0:12:36.05:0,36,357	0/0:7,0:8:17.86:0,18,161	0/0:15,0:16:23.19:0,23,257	0/0:15,0:15:33.02:0,33,319	0/0:18,0:18:45.09:0,45,457	0/0:16,0:16:30:0,30,292	0/0:20,1:21:24.78:0,25,399	0/0:8,0:8:15.02:0,15,146
chr10	38482182	.	GGT	G	863.79	PASS	AB=0.995;AC=17;AF=0.327;AN=52;BaseQRankSum=-1.241;DP=609;FS=3.515;HRun=0;HaplotypeScore=100.8178;InbreedingCoeff=0.0147;MQ=57.20;MQ0=29;MQRankSum=3.731;QD=3.00;ReadPosRankSum=1.591;VQSLOD=1.8343;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:25.93:0,26,190	./.	0/0:23,0:11:3.01:0,3,44	./.	1/1:17,8:23:5.75:32,6,0	0/0:18,0:17:1.23:0,1,137	0/0:27,0:23:11.95:0,12,94	0/0:24,0:24:2.16:0,2,130	1/1:19,0:19:2.94:147,3,0	0/0:25,0:25:36:0,36,230	0/0:18,0:18:20.97:0,21,173	0/0:35,0:32:6.47:0,6,52	0/1:22,1:20:30.60:139,0,31	0/1:22,0:21:9.55:150,0,10	1/1:13,0:13:2.22:151,2,0	1/1:17,0:17:5.16:145,5,0	0/1:24,0:22:38.60:94,0,39	0/0:12,0:11:20.86:0,21,155	0/1:18,0:18:29.96:37,0,30	0/1:26,0:25:65.30:65,0,141	0/1:42,0:37:16.44:16,0,177	0/0:19,0:19:12.72:0,13,167	0/0:16,0:15:8.97:0,9,71	0/0:29,0:26:23.57:0,24,191	0/0:14,0:14:12.13:0,12,218	0/1:23,0:20:6.46:6,0,90	0/1:22,0:22:21.51:22,0,234	0/1:14,0:12:9.02:9,0,55
chr10	38482216	.	TGAGAGAGAGAGA	T	701.57	PASS	AB=0.969;AC=8;AF=0.154;AN=52;BaseQRankSum=4.295;DP=554;FS=14.257;HRun=0;HaplotypeScore=198.4501;InbreedingCoeff=0.5676;MQ=46.72;MQ0=31;MQRankSum=-1.056;QD=7.54;ReadPosRankSum=-0.723;VQSLOD=1.7391;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:21,5:28:5.67:96,6,0	0/0:5,0:5:9.50:0,10,474	./.	./.	0/0:14,0:12:3.48:0,3,149	0/0:24,0:23:34.67:0,35,1023	0/0:21,0:16:12.98:0,13,255	0/0:22,0:21:18.06:0,18,540	0/0:23,0:23:30.10:0,30,931	1/1:12,5:19:19.83:522,20,0	0/0:14,5:23:2.94:0,3,18	0/0:23,0:20:14.23:0,14,519	0/0:21,0:19:37.01:0,37,1689	0/0:25,0:24:28.51:0,29,1189	0/0:18,0:18:19.48:0,19,864	0/0:18,0:18:32.81:0,33,1453	0/0:22,0:20:27.09:0,27,1181	1/1:13,0:11:5.96:140,6,0	0/0:15,0:13:21.97:0,22,460	0/0:28,0:27:33.58:0,34,1254	0/0:37,0:32:36.59:0,37,1255	0/0:15,0:15:18.06:0,18,847	0/0:20,0:19:18.53:0,19,928	0/0:33,0:29:41.95:0,42,1394	0/1:18,0:18:2.56:3,0,997	0/1:14,1:12:71.69:72,0,987	0/0:30,0:30:49.36:0,49,2360	0/0:13,0:13:24.08:0,24,810
chr10	38484857	.	TA	T	4469.76	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=10.867;DP=487;FS=10.596;HRun=3;HaplotypeScore=60.0003;InbreedingCoeff=0.9809;MQ=60.38;MQ0=3;MQRankSum=-2.005;QD=38.87;ReadPosRankSum=-0.629;VQSLOD=4.0631;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:66.23:0,66,1054	1/1:0,11:11:33.11:462,33,0	0/0:18,0:9:27.05:0,27,373	0/0:14,1:3:6.02:0,6,96	1/1:0,22:22:66.18:896,66,0	0/0:16,0:16:42.14:0,42,666	0/0:18,0:18:54.17:0,54,833	0/0:36,0:36:99:0,108,1717	1/1:0,13:13:39.13:534,39,0	0/0:23,0:22:66.22:0,66,1029	0/0:30,0:30:87.30:0,87,1385	0/0:15,0:15:45.15:0,45,709	1/1:0,13:13:33.07:432,33,0	1/1:1,16:17:51.11:674,51,0	1/1:1,9:10:30.10:394,30,0	1/1:1,13:14:39.13:535,39,0	1/1:0,15:15:42.05:543,42,0	0/0:21,0:21:57.19:0,57,904	0/0:6,0:6:18.06:0,18,283	0/0:23,0:23:69.24:0,69,1097	0/0:14,0:14:39.13:0,39,621	0/0:16,0:16:48.16:0,48,763	0/0:14,0:14:39.13:0,39,623	0/0:13,0:13:39.13:0,39,624	0/0:17,0:17:51.17:0,51,815	0/0:18,0:18:54.18:0,54,858	0/0:18,0:18:54.18:0,54,860	0/0:17,0:17:48.16:0,48,767
chr10	38484914	.	AATAT	A	9055.18	PASS	AB=0.682;AC=25;AF=0.446;AN=56;BaseQRankSum=8.411;DP=438;FS=7.335;HRun=0;HaplotypeScore=89.3011;InbreedingCoeff=0.7452;MQ=66.19;MQ0=2;MQRankSum=0.254;QD=35.37;ReadPosRankSum=3.664;VQSLOD=4.2315;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,24:29:60.16:991,60,0	1/1:4,8:12:30.10:505,30,0	0/1:7,0:4:6.84:11,0,7	0/0:12,0:6:5.79:0,6,47	1/1:9,22:32:72.24:1219,72,0	0/0:10,0:11:29.88:0,30,639	0/0:9,0:9:15.05:0,15,349	0/0:29,0:29:66.22:0,66,1560	1/1:3,10:13:36.12:611,36,0	1/1:2,23:24:62.42:963,62,0	1/1:8,23:31:63.17:1042,63,0	0/1:1,1:13:17.39:17,0,104	1/1:1,11:12:36.02:579,36,0	1/1:5,21:26:66.14:1090,66,0	1/1:0,13:13:33.11:561,33,0	0/0:2,0:9:22.41:0,22,109	1/1:2,19:21:60.18:967,60,0	1/1:2,12:14:27.09:461,27,0	0/0:12,0:12:26.87:0,27,566	0/0:14,0:14:36.11:0,36,852	0/0:8,0:8:21.07:0,21,490	0/0:5,0:5:6.02:0,6,150	0/1:3,1:7:26.22:39,0,26	0/0:2,0:3:2.80:0,3,13	0/0:24,0:26:62.79:0,63,1427	0/0:12,0:12:27.09:0,27,650	0/0:14,0:13:30.10:0,30,750	0/0:14,0:17:41.72:0,42,856
chr10	38485384	.	TCACACACACACA	T	2150.33	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-2.438;DP=493;FS=1.282;HRun=0;HaplotypeScore=154.7009;InbreedingCoeff=0.7790;MQ=64.30;MQ0=18;MQRankSum=3.391;QD=15.47;ReadPosRankSum=4.627;VQSLOD=2.4572;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:29,1:30:38.76:478,39,0	0/0:4,0:4:9:0,9,82	0/0:42,0:22:11.96:0,12,119	0/0:42,0:26:19.12:0,19,168	0/0:5,0:5:5.98:0,6,47	0/0:12,0:12:12.97:0,13,455	0/0:32,0:31:17.23:0,17,93	0/0:19,0:17:18.37:0,18,177	0/0:15,0:15:14.89:0,15,111	1/1:16,0:16:30.07:389,30,0	1/1:8,3:11:9.02:115,9,0	1/1:18,1:19:33.75:421,34,0	0/0:16,0:16:23.65:0,24,162	0/0:12,0:12:8.93:0,9,66	0/0:14,0:14:12:0,12,121	0/0:11,0:11:3.01:0,3,46	0/0:21,0:19:17.06:0,17,110	1/1:22,0:22:20.06:381,20,0	0/0:11,0:11:9.49:0,9,191	0/0:9,0:7:6.02:0,6,343	0/0:43,0:42:51.90:0,52,1013	0/0:10,0:9:5.45:0,5,32	1/1:10,0:10:5.99:50,6,0	1/1:31,0:31:38.83:501,39,0	0/0:6,0:6:1.91:0,2,155	0/0:11,0:10:18.05:0,18,442	0/0:9,0:12:14.96:0,15,249	0/0:5,0:4:6.02:0,6,163
chr10	38485419	.	T	TAC	818.33	PASS	AB=0.963;AC=24;AF=0.667;AN=36;BaseQRankSum=-0.838;DP=388;FS=4.893;HRun=0;HaplotypeScore=102.5686;InbreedingCoeff=-0.0870;MQ=44.57;MQ0=16;MQRankSum=2.101;QD=2.53;ReadPosRankSum=-0.485;VQSLOD=1.9734;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:31,0:32:6.37:47,6,0	./.	./.	./.	./.	1/1:10,0:10:5.69:47,6,0	0/1:42,0:40:6.66:10,0,7	0/0:18,0:17:1.87:0,2,30	./.	1/1:22,0:20:3.47:49,3,0	1/1:12,0:10:2.94:25,3,0	0/0:21,0:22:3.31:0,3,15	./.	./.	./.	./.	./.	0/1:21,0:21:0.46:0,0,1	1/1:15,0:15:2.34:71,2,0	0/1:10,0:9:21.24:59,0,21	0/1:49,1:48:68.77:116,0,69	0/1:12,0:11:26.17:37,0,26	0/1:16,0:15:0:0,0,0	1/1:33,0:33:3.38:25,3,0	1/1:13,0:13:6.46:49,6,0	0/1:11,7:17:11.43:198,0,11	1/1:7,0:7:11.21:104,11,0	0/1:10,0:8:19.98:93,0,20
chr10	38486980	.	T	TG	843.45	PASS	AB=0.805;AC=16;AF=0.286;AN=56;BaseQRankSum=-1.310;DP=329;FS=0.000;HRun=10;HaplotypeScore=52.4276;InbreedingCoeff=0.1004;MQ=81.57;MQ0=0;MQRankSum=-1.333;QD=4.99;ReadPosRankSum=-3.339;VQSLOD=-0.2192;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,15:24:2.42:231,2,0	0/0:1,0:2:2.03:0,2,6	0/0:18,0:14:6:0,6,88	0/1:14,0:12:36.30:51,0,36	0/0:10,0:10:17.97:0,18,148	1/1:3,5:9:5.85:46,6,0	0/1:11,8:19:43.50:165,0,44	0/0:11,0:11:12.55:0,13,85	0/0:7,0:7:11.99:0,12,98	1/1:2,0:2:3:26,3,0	0/1:3,0:3:15.59:48,0,16	0/1:3,5:8:15.62:55,0,16	0/0:8,0:8:20.97:0,21,172	0/0:16,1:17:3.91:0,4,232	0/0:20,0:20:32.90:0,33,270	0/0:16,0:17:34.97:0,35,274	0/1:35,1:36:19.29:19,0,521	0/1:5,10:15:6.89:127,0,7	0/0:9,0:10:10.59:0,11,79	0/0:2,0:3:5.03:0,5,31	0/1:21,2:26:99:113,0,126	0/0:8,0:8:20.69:0,21,152	1/1:1,4:5:3.01:32,3,0	0/1:3,5:8:12.61:84,0,13	0/0:7,0:8:16.99:0,17,128	0/0:6,0:6:11.97:0,12,98	0/0:11,0:12:22.98:0,23,178	0/0:2,0:2:2.98:0,3,22
chr10	38487242	.	CTGCCCTTA	C	1143.22	PASS	AB=1.000;AC=25;AF=0.481;AN=52;BaseQRankSum=6.675;DP=151;FS=14.637;HRun=0;HaplotypeScore=40.8474;InbreedingCoeff=0.6238;MQ=47.45;MQ0=6;MQRankSum=-4.393;QD=14.47;ReadPosRankSum=1.571;VQSLOD=-0.3331;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:3,0:3:6.01:61,6,0	1/1:1,0:1:3.01:36,3,0	0/0:5,0:3:9:0,9,116	0/0:8,0:3:5.93:0,6,66	1/1:2,0:2:3:25,3,0	0/0:7,0:6:18.06:0,18,514	0/0:13,0:13:39.11:0,39,765	0/0:5,0:5:10.17:0,10,100	1/1:7,0:7:11.57:92,12,0	./.	./.	1/1:7,2:9:16.88:270,17,0	1/1:7,0:5:3.27:57,3,0	1/1:8,0:6:15.03:207,15,0	1/1:7,0:7:12.02:145,12,0	1/1:9,0:8:12.29:153,12,0	0/1:9,0:8:0.55:117,0,1	1/1:4,0:3:2.97:20,3,0	0/0:5,0:4:12.04:0,12,267	0/0:2,0:1:3.01:0,3,49	0/0:13,0:13:33.04:0,33,509	0/0:3,0:2:2.92:0,3,17	1/1:1,2:3:3.01:71,3,0	1/1:3,7:9:1.62:67,2,0	0/0:3,0:3:9.03:0,9,254	0/0:2,0:2:6.02:0,6,111	0/0:3,0:2:5.98:0,6,69	0/0:2,0:2:6.02:0,6,137
chr10	38487931	.	GA	G	2915.91	PASS	AB=0.929;AC=16;AF=0.286;AN=56;BaseQRankSum=10.155;DP=608;FS=2.072;HRun=11;HaplotypeScore=66.3071;InbreedingCoeff=0.8172;MQ=74.33;MQ0=0;MQRankSum=1.533;QD=15.11;ReadPosRankSum=2.563;VQSLOD=4.4950;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,35:40:99:800,100,0	0/0:13,1:14:6.32:0,6,265	0/1:19,0:19:4.40:4,0,205	0/1:15,3:17:20.47:20,0,172	0/0:26,0:26:63.15:0,63,665	0/0:23,1:24:38.51:0,39,609	0/0:15,1:17:23.31:0,23,437	0/0:29,3:32:10.16:0,10,697	0/0:17,0:17:42.11:0,42,448	1/1:6,26:33:76.93:622,77,0	1/1:3,14:17:13.02:313,13,0	1/1:0,11:11:29.97:246,30,0	0/0:26,0:26:72.05:0,72,718	0/0:16,0:16:42.11:0,42,448	0/0:17,0:17:39.08:0,39,408	0/0:27,0:27:72.17:0,72,761	0/0:26,1:27:53.55:0,54,775	1/1:1,16:17:44.94:369,45,0	0/0:18,0:19:50.95:0,51,520	0/0:29,0:31:87.02:0,87,897	0/0:25,0:25:45.11:0,45,479	0/0:27,0:28:44.41:0,44,660	1/1:2,17:19:44.94:370,45,0	1/1:2,16:18:44.94:369,45,0	0/0:21,1:22:29.49:0,29,519	0/0:21,0:22:53.97:0,54,558	0/0:20,0:20:51.13:0,51,544	0/0:4,0:5:14.85:0,15,132
chr10	38489094	.	CACATACAT	C	12305.36	PASS	AB=0.792;AC=50;AF=0.962;AN=52;BaseQRankSum=-0.098;DP=633;FS=3.033;HRun=0;HaplotypeScore=163.5674;InbreedingCoeff=-0.0659;MQ=66.51;MQ0=8;MQRankSum=-2.005;QD=21.48;ReadPosRankSum=-0.647;VQSLOD=4.4919;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:26,1:27:7.99:108,0,8	1/1:4,6:10:15.05:338,15,0	./.	./.	1/1:12,12:25:30.05:659,30,0	1/1:17,11:29:24.08:530,24,0	0/1:7,11:18:77.81:167,0,78	1/1:33,0:31:14.99:143,15,0	1/1:17,17:34:39.13:933,39,0	1/1:11,14:25:42.14:1042,42,0	1/1:5,11:16:33.11:735,33,0	1/1:14,8:22:21.07:521,21,0	1/1:12,14:26:30.10:744,30,0	1/1:21,12:34:24.08:577,24,0	1/1:7,15:22:33.11:784,33,0	1/1:10,10:20:27.09:670,27,0	1/1:16,4:20:9.03:210,9,0	1/1:12,6:19:12:227,12,0	1/1:12,2:14:6.02:149,6,0	1/1:15,13:28:33.02:556,33,0	1/1:13,4:16:3.01:40,3,0	1/1:5,9:14:24.08:482,24,0	1/1:8,10:17:20.96:506,21,0	1/1:16,8:24:2.74:74,3,0	1/1:14,13:27:30.10:675,30,0	1/1:14,13:27:39.09:770,39,0	1/1:7,12:19:21.07:521,21,0	1/1:3,2:5:6.02:149,6,0
chr10	38489981	.	AGTGTGTGT	A	1854.80	PASS	AC=14;AF=0.269;AN=52;BaseQRankSum=6.118;DP=621;FS=6.394;HRun=0;HaplotypeScore=144.3314;InbreedingCoeff=0.8083;MQ=53.73;MQ0=31;MQRankSum=-7.850;QD=14.84;ReadPosRankSum=2.177;VQSLOD=2.2943;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:27:15.05:0,15,545	./.	0/0:38,0:7:3.01:0,3,71	./.	1/1:11,7:19:6.02:151,6,0	0/0:14,0:13:18.04:0,18,530	0/0:31,0:33:48.15:0,48,1608	0/0:32,0:26:2.34:0,2,122	1/1:8,8:16:9.03:226,9,0	0/0:17,0:19:30.07:0,30,910	0/0:10,0:13:9.03:0,9,243	0/0:27,0:27:42.14:0,42,1531	1/1:12,4:17:18.06:413,18,0	1/1:9,2:12:9.03:207,9,0	1/1:14,11:27:1.79:518,2,0	1/1:8,4:12:12.04:302,12,0	1/1:14,6:21:9.03:207,9,0	0/0:18,0:29:42.14:0,42,1414	0/0:12,0:12:15.52:0,16,410	0/0:16,0:16:24.08:0,24,838	0/0:49,0:55:60.21:0,60,1980	0/0:18,0:18:18.06:0,18,526	0/0:13,0:12:33.11:0,33,1045	0/0:34,0:39:60.21:0,60,2232	0/0:17,0:17:27.09:0,27,887	0/0:21,0:22:45.14:0,45,1241	0/0:18,0:18:27.08:0,27,893	0/0:12,0:12:13.86:0,14,498
chr10	38491523	.	CGT	C	3442.68	PASS	AB=0.954;AC=18;AF=0.321;AN=56;BaseQRankSum=9.154;DP=901;FS=0.000;HRun=0;HaplotypeScore=205.7494;InbreedingCoeff=0.7052;MQ=52.17;MQ0=17;MQRankSum=1.821;QD=10.53;ReadPosRankSum=0.370;VQSLOD=3.0911;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:4.79:0,5,38	1/1:4,6:10:8.89:86,9,0	0/0:21,0:5:2.99:0,3,24	0/0:18,0:8:2.99:0,3,23	1/1:11,6:19:14.11:102,14,0	0/0:29,0:29:22.57:0,23,587	0/0:46,0:46:89.80:0,90,1145	0/0:40,0:34:23.35:0,23,396	1/1:15,16:39:73.18:708,73,0	0/0:37,0:37:41.58:0,42,291	0/0:19,0:19:5.74:0,6,37	0/0:45,0:45:53.10:0,53,406	1/1:6,23:32:57.99:607,58,0	1/1:11,22:39:47.53:497,48,0	1/1:10,25:39:42.10:482,42,0	1/1:9,20:34:43.01:451,43,0	1/1:16,8:26:40.49:361,40,0	0/0:24,0:24:14.92:0,15,115	0/0:25,0:22:19.01:0,19,445	0/0:36,0:36:69.16:0,69,929	0/1:51,2:50:74.44:74,0,801	0/1:32,2:34:73.38:73,0,681	0/0:15,0:15:5.24:0,5,21	0/0:37,0:37:30.04:0,30,220	0/0:21,5:25:12.53:0,13,515	0/0:54,0:53:27.44:0,27,953	0/0:29,1:30:25.70:0,26,747	0/0:29,0:29:8.47:0,8,761
chr10	38491529	.	T	TGTGTGTGC	4409.44	PASS	AB=0.941;AC=18;AF=0.321;AN=56;BaseQRankSum=2.027;DP=903;FS=0.421;HRun=0;HaplotypeScore=291.1087;InbreedingCoeff=0.3576;MQ=52.45;MQ0=18;MQRankSum=-2.697;QD=10.11;ReadPosRankSum=-0.654;VQSLOD=3.1049;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:8,29:44:2.17:43,2,0	0/0:10,0:9:9.03:0,9,176	0/0:23,0:8:3.62:0,4,95	0/0:25,0:10:13.97:0,14,175	0/1:18,0:18:8.32:8,0,72	0/0:26,0:26:57.64:0,58,1340	0/0:47,0:47:99:0,120,2451	0/0:37,0:32:63.16:0,63,947	0/1:37,0:37:5.66:6,0,940	1/1:6,33:43:88.32:1709,88,0	1/1:5,16:25:3.01:127,3,0	1/1:43,1:44:50.44:1382,50,0	0/0:31,0:32:13.46:0,13,712	0/1:37,0:37:35.86:36,0,447	0/0:38,0:37:4.82:0,5,504	0/1:32,0:32:19.84:20,0,563	0/1:26,0:26:24.03:24,0,572	0/1:4,13:24:1.92:486,0,2	0/0:22,0:20:53.67:0,54,1001	0/0:31,0:30:75.68:0,76,1643	0/0:57,0:53:99:0,122,2447	0/0:37,0:37:93.09:0,93,1878	0/1:14,0:14:0.13:0,0,0	1/1:38,1:39:28.96:564,29,0	0/0:24,0:23:51.16:0,51,1263	0/1:51,1:51:4.71:5,0,2367	0/0:28,0:28:78.19:0,78,1784	0/0:29,0:29:69.21:0,69,1553
chr10	38491531	.	T	TGTGTGC	3860.12	PASS	AB=0.993;AC=9;AF=0.161;AN=56;BaseQRankSum=1.034;DP=904;FS=6.386;HRun=0;HaplotypeScore=260.7660;InbreedingCoeff=0.5831;MQ=53.19;MQ0=18;MQRankSum=-6.035;QD=17.16;ReadPosRankSum=1.985;VQSLOD=2.5148;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:43,0:43:7.66:43,8,0	0/0:11,0:10:10.58:0,11,141	0/0:21,0:7:12.07:0,12,131	0/0:28,0:11:20.87:0,21,206	0/0:18,0:18:20.56:0,21,174	0/0:25,0:25:57.17:0,57,1181	0/0:49,0:49:99:0,126,2265	0/0:38,0:31:70.05:0,70,956	0/0:37,0:37:60.60:0,61,1087	0/1:43,1:43:23.89:1134,0,24	0/1:23,0:23:18.93:89,0,19	1/1:8,36:47:49.96:1535,50,0	0/0:30,0:31:62.83:0,63,831	0/0:37,0:37:60.14:0,60,707	0/0:36,0:35:48.11:0,48,641	0/0:31,0:31:59.92:0,60,718	0/0:26,0:26:15.34:0,15,627	0/1:24,0:24:3.57:315,0,4	0/0:22,0:20:53.97:0,54,903	0/0:30,0:29:75.21:0,75,1495	0/0:55,0:51:99:0,127,2186	0/0:37,0:37:93.23:0,93,1678	0/0:2,12:15:3:0,3,26	1/1:11,28:44:29.61:743,30,0	0/0:23,0:22:51.16:0,51,1099	0/0:51,0:50:57.93:0,58,2260	0/0:29,0:29:78.19:0,78,1535	0/0:29,0:29:69.21:0,69,1409
chr10	38491533	.	T	TGTGC	2123.27	PASS	AB=1.000;AC=8;AF=0.143;AN=56;BaseQRankSum=4.630;DP=902;FS=8.482;HRun=0;HaplotypeScore=240.8637;InbreedingCoeff=0.3436;MQ=53.17;MQ0=18;MQRankSum=-5.778;QD=9.52;ReadPosRankSum=1.628;VQSLOD=1.7365;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:40,0:40:24.79:25,0,35	0/0:11,0:10:11.77:0,12,111	0/0:21,0:8:15.11:0,15,174	0/0:26,0:8:23.55:0,24,205	0/0:18,0:18:21.13:0,21,170	0/0:23,0:23:57.63:0,58,974	0/0:50,0:50:99:0,132,2042	0/0:40,0:32:75.01:0,75,917	0/0:38,0:38:65.17:0,65,885	0/1:45,0:44:99:706,0,112	0/1:23,0:23:14.87:63,0,15	1/1:48,0:48:4.57:813,5,0	0/0:35,0:35:71.63:0,72,682	0/0:37,0:37:59.97:0,60,606	0/0:35,0:34:49.65:0,50,514	0/0:32,0:32:59.99:0,60,601	0/0:27,0:27:18.39:0,18,532	0/1:25,0:25:9.64:194,0,10	0/0:21,0:19:54.08:0,54,783	0/0:31,0:30:75.22:0,75,1287	0/0:54,0:51:99:0,126,1863	0/0:36,0:36:93.22:0,93,1432	0/0:14,0:14:9.44:0,9,75	1/1:38,4:42:8.12:458,8,0	0/0:24,0:23:54.16:0,54,930	0/0:50,0:49:86.97:0,87,2003	0/0:27,0:27:81.19:0,81,1311	0/0:29,0:29:69.21:0,69,1200
chr10	38491811	.	T	TGA	3095.21	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-6.449;DP=1041;FS=4.241;HRun=0;HaplotypeScore=250.3952;InbreedingCoeff=0.9573;MQ=56.71;MQ0=5;MQRankSum=2.422;QD=21.35;ReadPosRankSum=1.138;VQSLOD=3.6964;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,45:57:66.04:1090,66,0	0/0:12,0:12:11.58:0,12,62	0/0:45,0:21:32.86:0,33,316	0/0:44,0:24:28.96:0,29,287	0/0:12,0:11:8.59:0,9,44	0/0:26,0:25:63.02:0,63,696	0/0:37,0:37:90.14:0,90,1040	0/0:43,0:43:99:0,99,1164	0/0:47,0:47:95.08:0,95,539	1/1:11,42:52:99:1573,102,0	1/1:3,16:20:18.06:300,18,0	0/0:50,0:48:55.99:0,56,352	0/0:42,0:42:89.48:0,89,496	0/0:39,0:38:60.53:0,61,322	0/0:59,0:59:99:0,113,642	0/0:51,0:51:81.86:0,82,528	0/0:26,0:26:32.50:0,32,182	1/1:13,2:15:12.11:289,12,0	0/0:27,0:26:42.37:0,42,674	0/0:30,0:30:72.11:0,72,847	0/0:84,0:81:99:0,207,2430	0/0:39,0:39:99:0,99,1217	0/0:17,0:16:14.46:0,14,89	0/0:46,0:47:52.43:0,52,334	0/0:27,0:27:57.12:0,57,657	0/0:44,0:44:99:0,108,1307	0/0:35,0:35:87.07:0,87,989	0/0:12,0:12:33.11:0,33,419
chr10	38491819	.	AGAGT	A	9975.39	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=15.180;DP=1015;FS=0.000;HRun=0;HaplotypeScore=251.3673;InbreedingCoeff=0.9812;MQ=56.55;MQ0=6;MQRankSum=-15.094;QD=38.37;ReadPosRankSum=0.536;VQSLOD=4.4620;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:81:0,81,1438	1/1:4,6:10:20.95:287,21,0	0/0:52,0:21:47.24:0,47,866	0/0:46,1:24:37.79:0,38,605	1/1:2,6:8:9.03:175,9,0	0/0:28,0:28:78.15:0,78,1636	0/0:36,0:36:99:0,107,2457	0/0:47,0:47:99:0,136,3190	1/1:14,31:45:99:1826,99,0	0/0:53,0:52:99:0,141,2370	0/0:18,0:18:18.06:0,18,357	0/0:48,0:46:57.40:0,57,323	1/1:8,29:37:93.30:1686,93,0	1/1:6,24:29:72.09:1225,72,0	1/1:10,46:56:99:2155,123,0	1/1:13,40:53:99:2137,120,0	1/1:13,8:21:15.22:485,15,0	0/0:13,0:13:36.07:0,36,564	0/0:28,0:27:78.17:0,78,1714	0/0:31,0:31:80.93:0,81,1903	0/0:83,0:81:99:0,226,5469	0/0:40,0:40:99:0,111,2776	0/0:16,0:15:12.81:0,13,46	0/0:45,0:45:48.73:0,49,229	0/0:27,0:27:66.21:0,66,1662	0/0:39,0:39:99:0,114,2980	0/0:35,0:35:46.82:0,47,2079	0/0:16,0:16:48.15:0,48,1158
chr10	38491821	.	AGT	A	4831.32	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=17.638;DP=1005;FS=0.611;HRun=0;HaplotypeScore=240.6902;InbreedingCoeff=0.9265;MQ=56.30;MQ0=6;MQRankSum=-11.902;QD=13.69;ReadPosRankSum=4.391;VQSLOD=4.5714;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:72.18:0,72,801	1/1:9,0:9:14.69:91,15,0	0/0:53,0:22:41.75:0,42,510	0/0:50,0:26:32.74:0,33,418	1/1:8,0:8:8.93:64,9,0	0/0:28,0:28:66.14:0,66,990	0/0:37,0:37:99:0,101,1583	0/0:50,0:50:99:0,141,2112	1/1:41,0:41:92.19:622,92,0	0/0:50,0:49:99:0,129,1381	0/0:18,0:18:18.05:0,18,202	1/1:7,40:45:51.17:711,51,0	1/1:36,0:36:82.38:523,82,0	1/1:29,0:28:63.90:403,64,0	1/1:55,0:55:99:682,108,0	1/1:50,0:50:99:747,114,0	0/1:20,0:20:5.26:123,0,5	0/0:14,0:14:30.22:0,30,301	0/0:27,0:26:70.96:0,71,1064	0/0:30,0:30:80.85:0,81,1210	0/0:84,0:82:99:0,219,3472	0/0:41,0:41:99:0,111,1807	1/1:3,11:13:14.80:209,15,0	1/1:6,38:44:38.29:657,38,0	0/0:27,0:27:63.20:0,63,1051	0/0:37,0:37:99:0,108,1878	0/0:34,0:35:75.06:0,75,1281	0/0:17,0:17:51.11:0,51,765
chr10	38491828	.	ATG	A	5480.43	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=17.581;DP=969;FS=7.740;HRun=0;HaplotypeScore=234.1356;InbreedingCoeff=0.9318;MQ=55.74;MQ0=8;MQRankSum=-16.583;QD=23.83;ReadPosRankSum=0.921;VQSLOD=4.3634;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:75.23:0,75,1207	1/1:1,5:6:12.04:142,12,0	0/0:51,0:23:35.12:0,35,481	0/0:46,0:26:43.93:0,44,493	1/1:4,7:11:9.03:109,9,0	0/0:23,0:23:42.14:0,42,695	0/0:37,0:37:97.86:0,98,1543	0/0:51,0:51:99:0,123,1935	1/1:5,31:36:75.22:884,75,0	0/0:50,0:49:99:0,117,1916	0/0:21,0:21:24.08:0,24,388	0/0:44,0:42:43.91:0,44,216	1/1:8,24:32:74.80:825,75,0	1/1:5,25:29:66.08:755,66,0	1/1:7,43:51:99:1160,102,0	1/1:6,41:47:99:1305,108,0	1/1:8,9:17:5.16:300,5,0	0/0:14,0:14:23.76:0,24,339	0/0:26,0:25:63.69:0,64,1044	0/0:30,0:30:78.24:0,78,1238	0/0:80,1:79:99:0,152,2995	0/0:41,0:41:99:0,99,1626	0/0:12,0:12:2.32:0,2,19	0/0:43,1:44:37.14:0,37,240	0/0:28,0:28:63.20:0,63,1019	0/0:37,0:37:96.33:0,96,1588	0/0:34,0:34:73.90:0,74,1193	0/0:17,0:17:39.12:0,39,621
chr10	38491878	.	GTA	G	5446.19	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=16.195;DP=873;FS=1.069;HRun=0;HaplotypeScore=197.3132;InbreedingCoeff=0.9536;MQ=63.51;MQ0=1;MQRankSum=-7.234;QD=20.87;ReadPosRankSum=2.083;VQSLOD=5.3061;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,2:48:44.06:0,44,761	1/1:0,8:8:21.07:272,21,0	0/0:34,0:30:83.43:0,83,1301	0/0:32,0:28:63.12:0,63,978	1/1:3,22:25:48.01:622,48,0	0/0:23,0:23:60.21:0,60,1146	0/0:36,0:36:99:0,108,1881	0/0:44,0:44:99:0,129,2280	1/1:12,26:38:75.08:900,75,0	0/0:49,0:49:32.41:0,32,864	0/0:22,0:22:39.05:0,39,390	0/1:36,0:36:0.41:0,0,457	1/1:5,11:16:30.10:382,30,0	1/1:10,22:31:66.12:809,66,0	1/1:16,22:38:60.13:751,60,0	1/1:11,32:43:89.67:1120,90,0	1/1:11,14:25:49.70:590,50,0	0/0:11,0:11:32.43:0,32,267	0/0:20,0:20:60.15:0,60,1035	0/0:26,0:26:75.22:0,75,1347	0/0:68,0:67:99:0,191,3315	0/0:31,0:31:81.24:0,81,1438	0/0:12,0:12:24.03:0,24,231	0/0:35,0:35:26.52:0,27,418	0/0:33,0:33:84.26:0,84,1526	0/0:36,0:36:99:0,108,1893	0/0:35,0:33:90.29:0,90,1684	0/0:15,0:15:45.12:0,45,787
chr10	38492020	.	C	CT	2352.83	PASS	AB=0.880;AC=17;AF=0.304;AN=56;BaseQRankSum=-0.054;DP=621;FS=7.137;HRun=10;HaplotypeScore=75.1951;InbreedingCoeff=0.8347;MQ=67.52;MQ0=3;MQRankSum=-4.310;QD=13.76;ReadPosRankSum=-0.233;VQSLOD=3.4402;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:75.76:0,76,595	1/1:3,13:16:22.12:281,22,0	0/0:16,0:16:4.91:0,5,119	0/0:12,0:14:12.74:0,13,126	1/1:10,15:25:20.47:423,20,0	0/0:21,0:22:9.07:0,9,269	0/0:17,0:17:32.95:0,33,271	0/0:36,0:35:70.91:0,71,570	1/1:5,10:15:21.05:222,21,0	0/0:24,0:24:59.89:0,60,488	0/0:22,0:22:50.94:0,51,419	0/0:17,1:18:16.22:0,16,330	1/1:7,5:13:15.04:160,15,0	1/1:1,14:14:33.03:331,33,0	1/1:5,12:18:35.92:366,36,0	1/1:5,15:20:36.09:379,36,0	1/1:9,16:27:2.25:367,2,0	0/1:19,2:19:25.03:25,0,225	0/0:17,0:14:29.93:0,30,244	0/0:25,0:25:53.88:0,54,437	0/0:24,0:23:56.14:0,56,447	0/0:21,0:21:53.91:0,54,443	0/0:28,0:29:13.65:0,14,413	0/0:30,0:30:53.87:0,54,434	0/0:25,1:26:33.91:0,34,485	0/0:32,0:31:71.90:0,72,591	0/0:27,0:26:56.86:0,57,461	0/0:7,0:7:11.37:0,11,97
chr10	38493776	.	GCA	G	145.10	PASS	AB=0.893;AC=9;AF=0.167;AN=54;BaseQRankSum=2.665;DP=548;FS=1.860;HRun=0;HaplotypeScore=98.2292;InbreedingCoeff=-0.1260;MQ=55.64;MQ0=8;MQRankSum=3.740;QD=0.83;ReadPosRankSum=0.505;VQSLOD=1.1861;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:3.90:0,4,21	0/0:13,0:13:10.46:0,10,72	0/0:36,0:18:8.36:0,8,47	0/0:41,0:28:21.69:0,22,187	0/0:20,0:17:5.46:0,5,48	0/1:13,2:15:5.04:5,0,311	0/1:18,2:21:7.04:7,0,461	0/1:32,3:35:20.49:20,0,383	0/0:12,0:11:4.10:0,4,15	0/0:19,0:18:20.63:0,21,151	./.	0/0:15,0:15:24.09:0,24,206	0/0:14,0:14:9.42:0,9,67	1/1:15,0:14:0.47:1,0,0	0/0:10,0:10:2.37:0,2,9	0/0:15,0:14:5.90:0,6,41	0/0:21,0:21:9.32:0,9,81	0/0:16,0:16:14.49:0,14,105	0/1:14,3:18:61.50:62,0,213	0/0:25,0:25:22.43:0,22,763	0/1:29,4:32:76.76:77,0,691	0/1:13,1:14:14.13:14,0,225	0/0:16,0:16:7.25:0,7,70	0/0:21,0:21:11.83:0,12,105	0/0:9,0:9:0.76:0,1,198	0/0:22,0:23:7.55:0,8,556	0/1:21,3:24:77.29:77,0,629	0/0:14,0:14:27.09:0,27,410
chr10	38493801	.	C	CAGAGAG	1228.60	PASS	AB=0.938;AC=14;AF=0.250;AN=56;BaseQRankSum=6.364;DP=604;FS=20.292;HRun=0;HaplotypeScore=170.9248;InbreedingCoeff=0.3478;MQ=60.53;MQ0=8;MQRankSum=-6.200;QD=6.24;ReadPosRankSum=-0.681;VQSLOD=1.3492;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:36,0:36:33.13:33,0,140	0/0:10,0:10:14.06:0,14,193	0/0:35,0:22:57.17:0,57,1248	0/0:33,0:24:62.90:0,63,1198	0/0:24,0:21:30.54:0,31,579	0/0:20,0:20:48.15:0,48,1007	0/0:18,0:18:48.16:0,48,1046	0/0:32,0:32:78.23:0,78,1706	0/0:9,0:9:14.76:0,15,261	0/1:22,0:21:99:137,0,168	1/1:1,0:10:5.93:71,6,0	1/1:6,13:20:20.99:746,21,0	0/0:19,0:19:33.04:0,33,636	0/1:14,0:13:29.85:30,0,156	0/1:6,0:15:38.84:39,0,126	0/1:14,0:13:4.25:4,0,284	0/0:22,0:22:21.32:0,21,763	0/1:17,0:17:66.72:67,0,168	0/0:22,0:22:66.22:0,66,1340	0/0:28,0:27:60.17:0,60,1266	0/0:35,0:34:96.32:0,96,2103	0/0:19,0:19:54.17:0,54,1179	1/1:24,0:24:2.20:47,2,0	1/1:6,16:24:7.76:217,8,0	0/0:10,0:10:30.10:0,30,693	0/0:29,0:29:75.54:0,76,1651	0/0:23,0:24:60.19:0,60,1244	0/0:18,0:18:48.14:0,48,1010
chr10	38494108	.	CT	C	4316.30	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=4.869;DP=625;FS=0.681;HRun=11;HaplotypeScore=79.1577;InbreedingCoeff=0.9091;MQ=73.79;MQ0=0;MQRankSum=-2.274;QD=16.60;ReadPosRankSum=2.891;VQSLOD=5.7457;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:33:74.51:0,75,421	1/1:1,7:8:17.98:148,18,0	0/0:15,0:16:18.51:0,19,176	0/1:15,0:14:30.94:31,0,60	1/1:3,20:26:60.99:479,61,0	0/0:24,1:27:37.10:0,37,570	0/0:18,2:20:20.34:0,20,397	0/0:25,1:27:41.30:0,41,604	1/1:4,19:24:23.98:393,24,0	0/0:7,1:23:30.33:0,30,304	0/0:0,0:19:51.39:0,51,267	1/1:3,23:29:66.03:510,66,0	1/1:3,15:18:38.93:320,39,0	1/1:3,7:12:25.04:184,25,0	1/1:4,19:24:20.99:368,21,0	1/1:4,21:25:50.92:419,51,0	1/1:3,18:21:46.97:375,47,0	0/0:1,2:26:16.32:0,16,247	0/0:22,0:24:56.79:0,57,563	0/0:18,0:18:42.05:0,42,420	0/0:23,0:25:46.40:0,46,551	0/0:21,2:23:7.83:0,8,485	1/1:2,27:30:64.94:523,65,0	1/1:4,24:28:68.88:566,69,0	0/0:18,0:19:52.37:0,52,546	0/0:24,1:25:44.52:0,45,674	0/0:29,2:33:49.59:0,50,879	0/0:6,0:6:18.04:0,18,185
chr10	38494303	.	G	GC	17386.72	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=11.168;DP=799;FS=2.592;HRun=1;HaplotypeScore=103.7443;InbreedingCoeff=0.9997;MQ=84.42;MQ0=0;MQRankSum=-5.042;QD=40.25;ReadPosRankSum=5.004;VQSLOD=4.8415;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,49:52:99:2020,135,0	1/1:0,13:13:33.11:494,33,0	0/0:24,0:24:52.41:0,52,798	0/0:25,0:25:66.18:0,66,809	1/1:1,16:17:36.12:520,36,0	0/0:21,0:21:63.20:0,63,817	0/0:26,0:26:75.23:0,75,958	0/0:29,0:29:87.22:0,87,1033	1/1:2,37:39:99:1524,102,0	1/1:1,28:29:87.29:1294,87,0	1/1:1,24:25:63.21:932,63,0	1/1:1,38:39:99:1573,105,0	1/1:5,18:23:60.19:878,60,0	1/1:1,25:26:78.26:1164,78,0	1/1:0,29:29:78.26:1167,78,0	1/1:3,31:34:81.27:1207,81,0	1/1:3,38:41:99:1750,120,0	1/1:1,25:26:78.26:1166,78,0	0/0:24,0:24:69.21:0,69,874	0/0:26,0:26:75.23:0,75,957	0/0:50,0:50:99:0,135,1723	0/0:37,0:37:99:0,108,1376	1/1:0,17:17:51.17:763,51,0	1/1:1,21:22:63.21:935,63,0	0/0:30,0:30:84.08:0,84,1039	0/0:27,0:27:78.24:0,78,988	0/0:38,0:37:99:0,108,1401	0/0:10,0:10:24.08:0,24,311
chr10	38494396	.	A	ATG	8213.94	PASS	AB=0.788;AC=30;AF=0.536;AN=56;BaseQRankSum=15.004;DP=1010;FS=0.649;HRun=0;HaplotypeScore=249.3156;InbreedingCoeff=0.8012;MQ=54.71;MQ0=6;MQRankSum=0.285;QD=13.90;ReadPosRankSum=1.562;VQSLOD=4.5898;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:36,19:55:23.28:1163,0,23	1/1:18,0:19:3.61:120,4,0	0/0:36,0:17:21.06:0,21,242	0/0:43,0:20:16.86:0,17,174	1/1:22,0:25:17.52:112,18,0	0/0:20,0:25:47.47:0,47,454	0/0:32,1:34:36.50:0,37,879	0/0:37,0:40:32.87:0,33,771	1/1:33,0:44:11.08:271,11,0	1/1:26,24:50:22.66:1442,23,0	1/1:9,16:25:21.61:778,22,0	1/1:23,1:48:88.56:799,89,0	1/1:32,0:36:16.75:279,17,0	1/1:10,1:50:20.75:175,21,0	1/1:40,0:45:21.37:196,21,0	1/1:27,0:38:37.81:409,38,0	1/1:28,0:29:22.36:231,22,0	1/1:14,18:32:3.58:888,4,0	0/0:15,0:17:35.75:0,36,369	0/0:15,0:15:33.10:0,33,391	0/0:86,0:88:99:0,165,1822	0/0:29,0:29:72.04:0,72,823	1/1:10,4:38:61.97:630,62,0	1/1:29,0:51:51.66:682,52,0	0/0:23,0:23:42.60:0,43,498	0/0:46,1:47:66.49:0,66,1233	0/0:20,0:20:44.87:0,45,504	0/1:4,1:5:38.53:39,0,62
chr10	38494711	.	C	CGT	19017.96	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=8.467;DP=1276;FS=1.013;HRun=0;HaplotypeScore=209.8094;InbreedingCoeff=0.9997;MQ=61.20;MQ0=1;MQRankSum=1.814;QD=35.02;ReadPosRankSum=5.354;VQSLOD=5.3546;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,120,1498	1/1:3,22:26:56.93:952,57,0	0/0:32,0:20:38.32:0,38,434	0/0:31,0:20:27.19:0,27,293	1/1:9,12:21:42.12:673,42,0	0/0:23,0:23:57.18:0,57,725	0/0:54,0:54:99:0,153,1903	0/0:48,0:48:99:0,108,1350	1/1:8,37:45:90.01:1474,90,0	0/0:61,0:62:99:0,168,2101	0/0:27,0:28:81.26:0,81,1027	1/1:4,56:61:99:2301,138,0	1/1:10,53:64:99:2226,135,0	1/1:14,52:68:91.31:2052,91,0	1/1:6,54:62:99:2358,141,0	1/1:8,43:51:76.21:1818,76,0	1/1:18,36:54:99:2101,132,0	0/0:41,0:41:98.66:0,99,1217	0/0:23,0:23:53.73:0,54,659	0/0:23,0:23:45.14:0,45,572	0/0:176,0:176:99:0,371,4737	0/0:30,0:30:53.30:0,53,928	1/1:2,24:26:50.90:853,51,0	1/1:9,54:65:99:2209,133,0	0/0:29,0:29:72.23:0,72,916	0/0:49,0:49:99:0,132,1577	0/0:26,0:26:66.21:0,66,839	0/0:9,0:9:27.05:0,27,311
chr10	38494809	.	TTG	T	14823.09	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=16.875;DP=1149;FS=5.926;HRun=0;HaplotypeScore=149.6782;InbreedingCoeff=0.9935;MQ=61.20;MQ0=15;MQRankSum=2.725;QD=26.14;ReadPosRankSum=5.247;VQSLOD=5.3880;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,36:44:98.97:1156,99,0	1/1:2,7:10:21.06:255,21,0	0/0:53,0:26:33.04:0,33,410	0/0:70,0:46:63.88:0,64,842	1/1:5,22:27:57.17:692,57,0	0/0:20,1:21:17.78:0,18,769	0/0:33,0:33:78.23:0,78,1226	0/0:47,2:49:14.74:0,15,1123	1/1:14,26:41:93.97:1084,94,0	1/1:11,39:51:99:1457,122,0	1/1:3,17:20:42.13:508,42,0	1/1:19,35:53:99:1522,129,0	1/1:14,32:47:99:1327,111,0	1/1:21,38:59:99:1730,144,0	1/1:16,28:43:90.07:1049,90,0	1/1:6,34:41:90.11:1070,90,0	1/1:14,11:24:50.12:614,50,0	1/1:11,14:27:28.40:615,28,0	0/0:33,0:32:63.15:0,63,938	0/0:35,1:36:56.88:0,57,1350	0/0:128,4:131:99:0,110,3544	0/0:36,1:37:80.69:0,81,1430	1/1:13,9:22:39.04:422,39,0	1/1:13,35:46:99:1322,111,0	0/0:40,2:42:38.56:0,39,1562	0/0:43,2:45:44.49:0,44,1594	0/0:25,0:25:66.21:0,66,1030	0/0:6,0:6:14.78:0,15,175
chr10	38495613	.	TACACACACACAC	T	10892.40	PASS	AB=0.725;AC=28;AF=0.500;AN=56;BaseQRankSum=9.678;DP=758;FS=28.309;HRun=0;HaplotypeScore=260.4043;InbreedingCoeff=0.7996;MQ=63.51;MQ0=4;MQRankSum=-10.923;QD=26.37;ReadPosRankSum=3.234;VQSLOD=2.5619;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:44:15.82:390,16,0	1/1:2,5:7:9.03:313,9,0	0/0:41,0:25:6.02:0,6,145	0/0:34,0:20:6.02:0,6,201	1/1:11,15:28:33.11:1061,33,0	0/0:11,0:20:30.10:0,30,1171	0/0:18,0:30:42.13:0,42,1420	0/0:22,0:27:37.28:0,37,1057	1/1:10,9:20:24.08:763,24,0	1/1:18,0:34:35.83:816,36,0	1/1:8,0:20:18.06:495,18,0	1/1:8,14:23:24.08:797,24,0	1/1:16,12:28:30.72:916,31,0	1/1:11,17:27:29.94:996,30,0	1/1:13,19:32:36.12:1221,36,0	1/1:12,21:33:51.17:1721,51,0	0/1:19,15:35:42.36:604,0,42	1/1:16,0:29:6.02:167,6,0	0/0:16,0:21:27.09:0,27,877	0/0:13,0:20:36.11:0,36,1172	0/0:22,0:41:45.15:0,45,1679	0/0:20,0:31:45.15:0,45,1635	1/1:12,10:22:15.02:437,15,0	0/1:20,10:30:97.37:196,0,97	0/0:11,0:19:21.05:0,21,653	0/0:12,0:19:39.13:0,39,1502	0/0:14,0:23:49.05:0,49,1856	0/0:6,0:16:33.11:0,33,1209
chr10	38502301	.	TACACAC	T	265.12	PASS	AB=1.000;AC=13;AF=0.283;AN=46;BaseQRankSum=3.768;DP=429;FS=7.428;HRun=0;HaplotypeScore=117.9402;InbreedingCoeff=0.2499;MQ=67.88;MQ0=16;MQRankSum=-2.443;QD=2.01;ReadPosRankSum=-0.011;VQSLOD=1.5430;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:35,1:34:2.78:59,3,0	0/0:4,0:4:6.02:0,6,126	./.	./.	0/0:10,0:10:9.03:0,9,185	1/1:15,1:17:2.74:12,3,0	0/0:20,0:19:2.68:0,3,35	0/0:28,0:28:2.04:0,2,6	0/0:13,0:13:6.02:0,6,135	1/1:14,0:13:5.95:77,6,0	./.	1/1:12,0:12:3.01:42,3,0	0/0:8,0:8:3.01:0,3,67	0/0:7,0:8:3.01:0,3,68	0/0:13,0:13:6.02:0,6,121	0/1:15,0:15:5.14:5,0,29	0/0:21,0:21:20.06:0,20,356	0/1:18,0:16:18.56:109,0,19	1/1:4,1:4:3.01:60,3,0	0/0:7,0:7:3:0,3,25	0/0:24,0:21:9.03:0,9,115	0/0:11,0:11:3.01:0,3,48	./.	0/0:17,0:18:0:0,0,0	0/0:21,1:23:15.57:0,16,356	0/1:14,0:14:27.81:28,0,68	0/0:18,0:18:6.02:0,6,74	./.
chr10	38502351	.	CACACACGG	C	605.17	PASS	AB=0.963;AC=14;AF=0.269;AN=52;BaseQRankSum=2.825;DP=438;FS=3.287;HRun=0;HaplotypeScore=156.7495;InbreedingCoeff=-0.1740;MQ=35.04;MQ0=56;MQRankSum=-4.360;QD=2.97;ReadPosRankSum=-1.656;VQSLOD=2.3398;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:26,3:23:0.43:113,0,0	0/0:3,0:2:6.02:0,6,111	./.	./.	0/0:11,0:11:12.04:0,12,217	0/0:17,1:17:10.03:0,10,56	0/0:22,0:18:3.59:0,4,112	0/0:23,0:20:49.57:0,50,296	0/1:18,0:18:59.31:59,0,152	0/1:9,1:10:24.74:114,0,25	0/0:7,0:6:3.01:0,3,42	0/1:21,0:18:47.86:77,0,48	0/1:15,0:14:24.77:25,0,92	0/0:11,0:11:6.28:0,6,73	0/1:12,0:12:64.96:65,0,96	0/1:9,0:9:21.32:54,0,21	0/0:18,0:18:12.65:0,13,389	0/1:11,7:13:44.58:147,0,45	0/1:18,0:13:18.54:19,0,159	0/0:9,0:9:7.45:0,7,43	0/0:30,0:22:25.90:0,26,187	0/0:15,0:14:9.62:0,10,97	0/1:13,0:13:21.67:22,0,38	1/1:19,0:13:2.21:35,2,0	0/0:29,0:27:29.97:0,30,494	0/1:22,0:20:18.86:19,0,224	0/0:20,0:19:37.17:0,37,194	0/0:9,0:5:9.99:0,10,51
chr10	38502361	.	G	GA	113.03	PASS	AB=0.872;AC=12;AF=0.214;AN=56;BaseQRankSum=4.180;DP=443;FS=39.845;HRun=0;HaplotypeScore=129.4214;InbreedingCoeff=-0.1498;MQ=35.28;MQ0=50;MQRankSum=0.587;QD=0.69;ReadPosRankSum=-1.130;VQSLOD=0.9344;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,2:24:12.94:0,13,44	0/0:2,0:1:2.80:0,3,13	0/0:6,0:2:6.02:0,6,83	0/0:10,0:2:5.75:0,6,53	0/1:12,2:14:1.55:2,0,18	0/0:18,0:17:3.53:0,4,63	0/1:23,0:20:8.47:8,0,90	0/0:22,0:19:53.79:0,54,673	0/1:12,5:17:30.24:38,0,30	0/1:10,1:11:24.12:74,0,24	1/1:8,1:8:3.28:9,3,0	0/1:18,3:20:23.91:24,0,54	0/1:11,3:14:29.30:29,0,83	0/1:12,1:13:8.14:8,0,13	0/0:8,3:11:11.28:0,11,56	0/1:5,4:9:13.07:37,0,13	0/1:17,2:19:8.99:9,0,118	0/1:13,1:12:7.92:8,0,46	0/0:23,0:17:48:0,48,589	0/0:8,0:8:6.02:0,6,74	0/0:28,0:19:33.99:0,34,412	0/0:18,0:16:18.39:0,18,184	0/0:13,1:14:0.75:0,1,14	0/0:12,4:12:3.86:0,4,15	0/0:25,0:24:42.10:0,42,444	0/0:23,0:21:52.28:0,52,586	0/0:19,0:18:42.12:0,42,521	0/0:7,0:3:6.02:0,6,83
chr10	38502362	.	GGAGA	G	1673.10	PASS	AB=0.838;AC=12;AF=0.231;AN=52;BaseQRankSum=-5.610;DP=473;FS=22.414;HRun=0;HaplotypeScore=137.7734;InbreedingCoeff=0.6102;MQ=35.63;MQ0=50;MQRankSum=5.195;QD=11.78;ReadPosRankSum=4.874;VQSLOD=1.7391;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:31:8.53:0,9,84	./.	0/0:6,0:2:6.02:0,6,143	0/0:10,0:2:6.02:0,6,141	0/0:16,0:18:8:0,8,121	0/0:14,0:17:5.23:0,5,72	0/0:16,0:19:8.16:0,8,86	0/1:22,0:19:0.26:10,0,0	0/0:13,0:18:24.02:0,24,315	0/0:13,0:14:33.08:0,33,481	0/0:8,0:8:6:0,6,72	0/0:19,0:22:24.34:0,24,340	0/0:12,0:15:15.52:0,16,241	0/0:12,0:13:2.74:0,3,52	0/0:9,0:12:8.91:0,9,64	0/0:5,0:9:14.92:0,15,175	0/0:18,0:20:24.08:0,24,431	0/0:14,0:13:12.04:0,12,197	0/0:22,0:17:0.14:0,0,14	1/1:3,4:8:9.24:116,9,0	1/1:18,9:20:26.77:403,27,0	1/1:11,6:16:15.05:240,15,0	0/0:8,0:20:8.81:0,9,98	0/0:15,0:15:8.23:0,8,108	1/1:13,12:24:21:325,21,0	0/1:12,10:21:13.86:350,0,14	1/1:9,7:17:27.08:393,27,0	./.
chr10	38502366	.	A	AGAGAGAGAGAGA	5608.27	PASS	AB=1.000;AC=35;AF=0.648;AN=54;BaseQRankSum=-5.427;DP=489;FS=26.390;HRun=0;HaplotypeScore=179.8520;InbreedingCoeff=0.6122;MQ=36.42;MQ0=51;MQRankSum=-4.792;QD=17.86;ReadPosRankSum=-2.429;VQSLOD=2.1327;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:36,0:31:9.47:303,9,0	1/1:5,0:3:3.01:57,3,0	0/0:6,0:2:6.02:0,6,147	0/0:16,0:6:6:0,6,82	1/1:19,0:19:5.67:49,6,0	1/1:19,0:18:5.62:82,6,0	1/1:21,0:18:3.31:50,3,0	0/0:24,0:22:3.44:0,3,33	1/1:18,0:18:23.69:836,24,0	1/1:10,6:17:35.10:946,35,0	1/1:10,0:9:3.01:51,3,0	1/1:24,0:23:24.13:650,24,0	1/1:14,0:14:18.23:535,18,0	1/1:13,0:13:2.76:133,3,0	1/1:13,0:13:9.03:401,9,0	1/1:11,0:11:14.79:461,15,0	1/1:17,0:17:21.06:435,21,0	1/1:15,0:13:8.99:303,9,0	0/0:21,0:16:3.01:0,3,39	0/0:8,0:8:8.56:0,9,186	0/0:27,0:19:23.72:0,24,620	0/0:18,0:16:15.05:0,15,419	1/1:20,0:20:2.41:139,2,0	1/1:19,0:15:5.58:160,6,0	0/0:26,0:25:18.37:0,18,503	0/1:23,0:21:18.59:19,0,500	0/0:20,0:19:27.09:0,27,701	./.
chr10	38504930	.	CGTGTGTGTGTGTGTGTGTGT	C	1308.74	PASS	AB=0.761;AC=6;AF=0.107;AN=56;BaseQRankSum=5.552;DP=602;FS=1.083;HRun=0;HaplotypeScore=265.4628;InbreedingCoeff=0.4763;MQ=67.03;MQ0=13;MQRankSum=-3.975;QD=16.57;ReadPosRankSum=1.579;VQSLOD=1.7382;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:20,18:38:14.97:455,15,0	0/0:9,0:9:15.05:0,15,1065	0/0:35,0:22:8.99:0,9,137	0/0:30,0:23:9:0,9,161	0/0:5,0:7:9.03:0,9,616	0/0:13,0:13:21.07:0,21,1571	0/0:24,0:30:21.90:0,22,1581	0/0:22,0:21:21.05:0,21,616	0/0:19,0:19:27.96:0,28,1257	0/1:16,5:21:99:225,0,216	1/1:4,1:5:3.01:148,3,0	0/0:26,0:26:33.11:0,33,2515	0/0:17,0:17:24.08:0,24,1509	0/0:19,0:19:23.10:0,23,1444	0/0:12,0:11:24.06:0,24,1504	0/0:13,0:19:26.27:0,26,2141	0/0:28,0:40:50.73:0,51,3537	0/1:9,5:15:4.94:603,0,5	0/0:33,0:32:46.61:0,47,2137	0/0:13,0:15:9.43:0,9,300	0/0:42,0:54:51.18:0,51,2384	0/0:14,0:18:8.88:0,9,384	0/0:12,0:12:12.04:0,12,804	0/0:22,0:27:49.04:0,49,3306	0/0:22,0:20:33.11:0,33,2552	0/0:14,0:18:30.10:0,30,1792	0/0:16,0:16:12.93:0,13,513	0/0:6,0:3:3.01:0,3,225
chr10	38505473	.	A	ACATGC	17168.92	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-17.696;DP=916;FS=0.000;HRun=0;HaplotypeScore=176.1637;InbreedingCoeff=0.9995;MQ=82.95;MQ0=0;MQRankSum=-3.004;QD=64.79;ReadPosRankSum=6.962;VQSLOD=5.1347;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,126,2523	1/1:4,11:17:33.11:1004,33,0	0/0:25,0:25:63.04:0,63,1133	0/0:30,0:30:69.23:0,69,1307	1/1:2,18:20:23.11:731,23,0	0/0:14,0:14:42.13:0,42,822	0/0:40,0:40:99:0,111,2274	0/0:45,0:43:99:0,111,2117	1/1:4,32:38:90.31:2723,90,0	0/0:49,0:49:99:0,135,2615	0/0:19,0:19:54.19:0,54,1101	0/0:37,0:37:96.33:0,96,1963	1/1:5,28:36:81.16:2465,81,0	1/1:7,28:37:69.19:2004,69,0	1/1:5,42:48:99:3367,111,0	1/1:4,24:29:69.24:2106,69,0	1/1:10,29:39:93.32:2770,93,0	0/0:21,0:21:54.16:0,54,1051	0/0:26,0:26:78.27:0,78,1543	0/0:19,0:19:51.16:0,51,977	0/0:64,0:63:99:0,175,3467	0/0:19,0:19:54.19:0,54,1084	0/0:29,0:29:84.29:0,84,1699	0/0:45,0:45:95.91:0,96,1945	0/0:31,0:31:84.29:0,84,1697	0/0:44,0:44:99:0,123,2517	0/0:21,0:21:57.20:0,57,1137	0/0:20,0:20:54.15:0,54,1026
chr10	38505561	.	CTGTCTG	C	513.92	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=5.253;DP=949;FS=16.186;HRun=0;HaplotypeScore=232.5302;InbreedingCoeff=0.8850;MQ=57.65;MQ0=14;MQRankSum=-3.190;QD=5.98;ReadPosRankSum=-1.664;VQSLOD=0.5583;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:38:22.01:0,22,337	0/0:14,0:14:24.06:0,24,624	0/0:34,0:13:33.04:0,33,329	0/0:58,0:33:56.26:0,56,749	0/0:19,0:18:38.96:0,39,629	0/0:25,0:25:66.20:0,66,1925	0/0:43,0:43:99:0,114,2600	0/0:32,0:31:84.17:0,84,1335	0/0:49,0:48:99:0,129,3283	0/0:40,0:40:79.13:0,79,1594	0/0:15,0:15:17.39:0,17,215	1/1:1,27:30:26.20:479,26,0	0/0:35,0:36:81.84:0,82,1886	0/0:37,0:36:89.40:0,89,1778	0/0:40,0:38:99:0,108,2555	0/0:41,0:40:99:0,113,2407	0/0:46,0:46:99:0,113,2442	0/0:26,0:27:56.22:0,56,1152	0/0:17,0:16:42.04:0,42,719	0/0:25,0:24:71.61:0,72,1505	0/0:86,0:84:99:0,205,4976	0/0:31,0:31:74.86:0,75,1834	1/1:0,13:15:2.92:17,3,0	1/1:1,39:41:5.96:140,6,0	0/0:23,0:23:57.14:0,57,1482	0/0:42,0:42:99:0,123,2374	0/0:28,0:28:80.20:0,80,1902	0/0:16,0:16:48.09:0,48,1341
chr10	38505563	.	GTC	G	328.12	PASS	AB=0.967;AC=11;AF=0.196;AN=56;BaseQRankSum=7.083;DP=951;FS=4.124;HRun=0;HaplotypeScore=170.5340;InbreedingCoeff=0.3702;MQ=57.46;MQ0=15;MQRankSum=-3.254;QD=1.20;ReadPosRankSum=-5.039;VQSLOD=1.0643;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:40:23.41:0,23,210	0/0:13,0:13:24.02:0,24,303	0/0:34,0:13:30.50:0,31,289	0/0:60,0:32:56.23:0,56,666	0/0:19,0:18:38.74:0,39,361	0/0:25,0:25:35.98:0,36,1027	0/0:42,0:42:90.58:0,91,1628	0/0:33,0:32:45.89:0,46,932	0/0:46,4:49:23.27:0,23,1251	0/0:38,0:38:76.02:0,76,951	0/0:15,0:15:17.47:0,17,128	1/1:30,0:30:25.57:175,26,0	0/1:34,2:36:51.26:51,0,641	0/1:34,2:35:14.79:15,0,747	0/0:39,1:38:63.52:0,64,1071	0/1:41,0:40:47.39:47,0,888	0/1:44,3:47:99:126,0,940	0/1:28,0:28:3.26:3,0,597	0/0:18,0:17:39.53:0,40,468	0/0:27,0:26:77.61:0,78,1047	0/0:85,0:83:99:0,148,2862	0/0:31,0:31:44.72:0,45,993	1/1:15,0:15:2.92:17,3,0	1/1:40,0:40:5.93:44,6,0	0/0:22,0:22:31.57:0,32,792	0/0:41,0:41:99:0,112,1496	0/0:28,0:28:71.80:0,72,1114	0/0:16,0:16:48.06:0,48,783
chr10	38505565	.	C	CTGTGTG	2989.82	PASS	AB=0.719;AC=15;AF=0.278;AN=54;BaseQRankSum=0.307;DP=980;FS=0.000;HRun=0;HaplotypeScore=239.0648;InbreedingCoeff=0.2011;MQ=57.28;MQ0=16;MQRankSum=-2.449;QD=7.51;ReadPosRankSum=-6.376;VQSLOD=0.7562;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:13,27:47:9.06:175,9,0	0/1:9,0:13:7.54:8,0,106	0/0:31,0:11:2.98:0,3,21	0/0:63,0:33:2.90:0,3,18	0/0:10,0:22:3.54:0,4,7	0/0:24,0:26:56.61:0,57,1013	0/0:38,0:41:75.12:0,75,1156	0/0:30,0:33:4.02:0,4,309	0/1:30,0:50:97.46:97,0,353	1/1:18,18:40:68.59:1406,69,0	1/1:4,11:18:3.01:39,3,0	0/0:30,0:30:5.59:0,6,105	0/1:21,0:36:84.75:106,0,85	0/1:23,0:35:59.33:75,0,59	0/1:22,0:39:34.32:34,0,188	0/1:24,0:39:81.14:81,0,418	0/1:25,0:46:99:121,0,182	1/1:21,4:29:52.89:1011,53,0	0/0:18,0:18:5.12:0,5,278	0/0:28,0:27:51.09:0,51,785	0/0:84,0:86:99:0,111,2341	0/0:25,0:32:51.17:0,51,972	./.	0/0:41,0:41:5.68:0,6,83	0/0:21,0:24:42.05:0,42,774	0/0:39,0:41:50.96:0,51,931	0/0:26,0:28:55.47:0,55,1008	0/0:16,0:16:35.72:0,36,597
chr10	38505990	.	TCTGTCTCCCTCTCCTCTCCTCTCCTCTC	T	10479.74	PASS	AB=0.971;AC=17;AF=0.304;AN=56;BaseQRankSum=10.167;DP=875;FS=6.803;HRun=0;HaplotypeScore=537.5290;InbreedingCoeff=0.9007;MQ=58.46;MQ0=17;MQRankSum=-12.019;QD=53.74;ReadPosRankSum=-2.032;VQSLOD=0.7758;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,126,9757	1/1:0,9:9:20.99:969,21,0	0/0:78,0:29:69.27:0,69,2853	0/0:117,0:48:99:0,116,4946	1/1:0,13:13:14.96:189,15,0	0/0:16,0:15:43.66:0,44,3224	0/0:27,0:27:77.45:0,77,7923	0/0:40,0:40:99:0,111,7697	1/1:2,27:29:47.95:1988,48,0	0/0:27,0:27:81.23:0,81,5833	0/0:20,0:20:56.23:0,56,4546	0/1:33,1:34:99:119,0,3935	1/1:1,15:16:17.97:624,18,0	1/1:1,20:21:33.02:569,33,0	1/1:2,27:29:38.83:1105,39,0	1/1:0,27:27:51.10:2643,51,0	1/1:11,6:17:39.85:2274,40,0	0/0:24,0:24:55.75:0,56,5759	0/0:18,0:16:42.14:0,42,3201	0/0:29,0:29:84.27:0,84,8211	0/0:40,0:40:99:0,113,10845	0/0:47,0:46:99:0,135,13391	0/0:21,0:21:63.17:0,63,2048	0/0:26,0:26:54.14:0,54,1606	0/0:27,0:27:78.09:0,78,6659	0/0:32,0:31:93.31:0,93,8834	0/0:30,0:30:87.30:0,87,8764	0/0:7,0:7:8.52:0,9,1961
chr10	38505997	.	C	CCCTCT	5135.84	PASS	AB=0.983;AC=10;AF=0.185;AN=54;BaseQRankSum=-7.068;DP=882;FS=14.397;HRun=0;HaplotypeScore=254.4171;InbreedingCoeff=0.7047;MQ=58.61;MQ0=18;MQRankSum=0.344;QD=18.08;ReadPosRankSum=-0.469;VQSLOD=3.0597;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,30:51:84.29:2346,84,0	0/0:9,0:9:11.99:0,12,125	0/0:84,0:32:16.64:0,17,230	0/1:126,0:50:2.81:3,0,301	./.	0/0:16,0:15:24.07:0,24,395	0/0:28,0:28:60.18:0,60,1027	0/0:35,0:35:36.10:0,36,572	0/0:27,0:27:22.46:0,22,216	1/1:13,13:28:39.13:1000,39,0	1/1:11,11:23:27.56:767,28,0	0/0:34,0:33:54.13:0,54,601	0/0:15,0:15:6.02:0,6,70	0/0:20,0:20:3.01:0,3,35	0/0:29,0:28:6.96:0,7,72	0/0:27,0:27:30.31:0,30,306	0/0:11,0:11:28.60:0,29,292	1/1:13,13:27:23.41:995,23,0	0/0:26,0:21:24.07:0,24,379	0/0:28,0:28:57.17:0,57,968	0/0:40,0:40:69.66:0,70,1218	0/0:47,0:46:78.25:0,78,1385	0/0:22,0:22:21.94:0,22,243	0/0:26,0:25:30.71:0,31,342	0/0:20,0:20:47.95:0,48,838	0/1:28,1:28:25.02:25,0,971	0/0:31,0:31:54.18:0,54,980	0/0:8,0:8:15.05:0,15,276
chr10	38506003	.	C	CTGT	712.21	PASS	AB=0.922;AC=6;AF=0.111;AN=54;BaseQRankSum=9.153;DP=883;FS=2.230;HRun=0;HaplotypeScore=246.0725;InbreedingCoeff=0.1885;MQ=62.39;MQ0=19;MQRankSum=-6.369;QD=8.00;ReadPosRankSum=3.653;VQSLOD=2.9360;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:52:99:0,131,1550	0/1:9,0:9:19.06:63,0,19	0/0:88,0:32:48.85:0,49,888	0/0:132,0:59:99:0,125,1786	./.	0/0:16,0:15:39.26:0,39,778	0/0:30,0:30:90.31:0,90,1677	0/0:35,0:35:96.33:0,96,1776	0/1:27,0:27:18.68:197,0,19	0/0:25,0:25:69.11:0,69,955	0/0:23,0:23:37.73:0,38,570	0/0:34,0:33:35.90:0,36,1009	0/1:15,0:15:12.49:12,0,15	0/0:20,0:20:2.98:0,3,21	0/0:29,0:28:2.04:0,2,36	1/1:27,0:27:9.92:299,10,0	0/1:6,5:11:12.86:263,0,13	0/0:24,0:24:57.08:0,57,746	0/0:25,0:20:54.17:0,54,973	0/0:30,0:30:87.24:0,87,1513	0/0:39,0:39:99:0,108,1917	0/0:46,0:45:99:0,126,2316	0/0:20,0:20:48.05:0,48,579	0/0:26,0:25:44.64:0,45,482	0/0:20,0:20:59.87:0,60,1045	0/0:29,0:28:81.28:0,81,1482	0/0:28,0:28:84.29:0,84,1552	0/0:9,0:9:4.68:0,5,359
chr10	38506006	.	CT	C	1277.16	PASS	AC=20;AF=0.370;AN=54;BaseQRankSum=13.421;DP=876;FS=5.810;HRun=1;HaplotypeScore=216.0789;InbreedingCoeff=0.9082;MQ=63.63;MQ0=18;MQRankSum=-10.565;QD=5.86;ReadPosRankSum=1.595;VQSLOD=0.5938;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,129,1528	1/1:9,0:9:9.34:32,9,0	0/0:86,1:31:32.90:0,33,859	0/0:137,0:61:99:0,114,1842	./.	0/0:16,0:15:42.14:0,42,667	0/0:30,0:30:90.31:0,90,1438	0/0:32,0:32:93.32:0,93,1484	1/1:27,0:27:18.59:62,19,0	0/0:26,0:26:72.17:0,72,955	0/0:22,0:22:55.19:0,55,631	1/1:15,18:32:28.71:599,29,0	1/1:15,0:15:4.42:14,4,0	1/1:20,0:20:2.22:7,2,0	1/1:29,0:28:6.57:19,7,0	1/1:27,0:27:24.58:80,25,0	1/1:11,0:11:21.52:66,22,0	0/0:25,0:25:64.02:0,64,763	0/0:24,0:19:51.17:0,51,813	0/0:28,0:28:81.26:0,81,1269	0/0:35,0:35:99:0,102,1573	0/0:45,0:44:99:0,120,1890	1/1:2,18:20:8.86:271,9,0	1/1:11,16:26:23.59:327,24,0	0/0:20,0:20:43.01:0,43,893	0/0:30,0:29:81.27:0,81,1274	0/0:27,0:27:81.26:0,81,1270	0/0:8,0:8:9.28:0,9,321
chr10	38506007	.	T	TG	333.37	PASS	AB=1.000;AC=8;AF=0.148;AN=54;BaseQRankSum=9.200;DP=872;FS=3.425;HRun=0;HaplotypeScore=219.4759;InbreedingCoeff=0.6939;MQ=63.30;MQ0=17;MQRankSum=-7.110;QD=3.75;ReadPosRankSum=2.463;VQSLOD=3.5309;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,127,1201	0/1:9,0:9:5.20:34,0,5	0/0:84,0:30:60.82:0,61,803	0/0:136,0:62:99:0,123,1621	./.	0/0:17,0:16:42.12:0,42,567	0/0:30,0:30:90.30:0,90,1259	0/0:32,0:32:93.31:0,93,1300	1/1:27,0:27:5.35:101,5,0	0/0:26,0:26:71.69:0,72,790	0/0:22,0:22:37.27:0,37,508	0/0:33,0:32:44.53:0,45,567	0/1:15,0:15:2.46:3,0,2	0/0:20,0:20:2.22:0,2,7	0/0:29,0:28:2.91:0,3,11	1/1:27,0:27:19.90:160,20,0	1/1:6,5:11:8.64:170,9,0	0/0:25,0:25:53.19:0,53,636	0/0:24,0:19:51.17:0,51,712	0/0:29,0:29:81.01:0,81,1098	0/0:34,0:34:99:0,99,1363	0/0:45,0:44:99:0,117,1635	0/0:20,0:20:46.20:0,46,373	0/0:26,0:25:40.03:0,40,274	0/0:20,0:20:56.71:0,57,796	0/0:30,0:29:81.26:0,81,1116	0/0:27,0:27:78.26:0,78,1090	0/0:8,0:8:23.11:0,23,299
chr10	38506010	.	TCTCC	T	3018.71	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=12.859;DP=876;FS=0.000;HRun=0;HaplotypeScore=243.7623;InbreedingCoeff=0.8175;MQ=64.75;MQ0=16;MQRankSum=-11.826;QD=13.01;ReadPosRankSum=1.003;VQSLOD=2.9000;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,135,2818	1/1:9,0:9:11.99:106,12,0	0/0:83,0:31:82.36:0,82,1245	0/0:131,0:61:99:0,100,2126	0/1:13,0:13:0:0,0,0	0/0:17,0:16:45.14:0,45,999	0/0:31,0:31:93.30:0,93,2419	0/0:35,0:35:99:0,102,2000	1/1:27,0:27:24.01:220,24,0	0/0:25,0:25:69.23:0,69,1541	0/0:22,0:22:56.26:0,56,932	1/1:15,19:33:75.20:1035,75,0	0/1:15,0:15:0.17:47,0,0	1/1:20,0:20:3:28,3,0	1/1:29,0:28:11.97:98,12,0	1/1:27,0:27:33:293,33,0	0/1:11,0:11:17.59:130,0,18	0/0:22,0:23:57.17:0,57,1252	0/0:25,0:20:54.14:0,54,1198	0/0:31,0:31:90.06:0,90,2208	0/0:35,0:35:99:0,102,2474	0/0:46,0:45:99:0,129,3153	1/1:2,18:20:46.84:632,47,0	1/1:12,15:26:46.84:626,47,0	0/0:20,0:20:60.19:0,60,1533	0/0:31,0:30:87.29:0,87,2117	0/0:26,0:26:78.27:0,78,2046	0/0:8,0:8:19.49:0,19,558
chr10	38507422	.	A	AC	1891.83	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-8.586;DP=640;FS=11.047;HRun=5;HaplotypeScore=63.0163;InbreedingCoeff=0.9983;MQ=83.34;MQ0=0;MQRankSum=-2.599;QD=27.82;ReadPosRankSum=0.954;VQSLOD=3.0606;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:93.23:0,93,999	0/0:10,0:10:30.08:0,30,322	0/0:15,0:15:36.06:0,36,369	0/0:27,0:27:63.01:0,63,638	0/0:22,0:22:51.12:0,51,547	0/0:18,0:18:51.10:0,51,532	0/0:31,0:31:90.20:0,90,957	0/0:25,0:25:72.17:0,72,766	0/0:32,0:32:87.13:0,87,905	0/0:30,0:30:81.05:0,81,862	0/0:16,0:16:45.11:0,45,484	1/1:2,24:26:57.02:750,57,0	0/0:18,0:18:51.13:0,51,548	0/0:22,0:22:63.16:0,63,677	0/0:25,0:25:69.17:0,69,740	0/0:21,0:21:57.14:0,57,613	0/0:29,0:29:72.18:0,72,774	0/0:26,0:26:69.17:0,69,742	0/0:22,0:22:60.12:0,60,622	0/0:17,0:17:45.09:0,45,469	0/0:38,0:38:99:0,108,1153	0/0:22,0:22:63.15:0,63,671	1/1:1,17:18:42.14:553,42,0	1/1:3,21:24:57.16:733,57,0	0/0:21,0:21:54.13:0,54,580	0/0:25,0:25:72.17:0,72,767	0/0:17,0:17:48.12:0,48,514	0/0:7,0:7:21.02:0,21,214
chr10	38508634	.	C	CATGCATGCACACACATCACCCAT	25901.47	PASS	AB=1.000;AC=27;AF=0.482;AN=56;BaseQRankSum=12.530;DP=1087;FS=55.065;HRun=0;HaplotypeScore=621.7355;InbreedingCoeff=0.7353;MQ=53.44;MQ0=2;MQRankSum=-16.089;QD=43.46;ReadPosRankSum=-5.312;VQSLOD=-0.1667;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:41,0:41:79.48:993,0,79	1/1:20,0:20:29.07:913,29,0	0/0:34,0:32:35.93:0,36,808	0/0:36,0:31:53.75:0,54,1171	1/1:23,0:23:3.23:191,3,0	0/0:26,0:26:71.96:0,72,3226	0/0:41,0:41:90.26:0,90,3262	0/0:35,0:35:69.20:0,69,2111	1/1:12,21:57:6.24:79,6,0	1/1:54,0:54:99:6391,129,0	1/1:19,0:18:7.43:265,7,0	1/1:70,0:70:99:2599,104,0	1/1:53,0:53:77.23:2631,77,0	1/1:52,0:52:86.01:2268,86,0	1/1:62,0:61:98.96:2588,99,0	1/1:46,0:46:99:3243,102,0	1/1:20,0:20:17.85:460,18,0	0/1:26,0:25:99:2477,0,115	0/0:29,0:29:54.18:0,54,1974	0/0:25,0:25:69.20:0,69,3027	0/0:131,0:131:99:0,306,14630	0/0:26,0:26:47.94:0,48,2414	1/1:20,0:20:21.88:636,22,0	0/1:33,0:33:99:167,0,108	0/0:23,0:23:51.14:0,51,2195	0/0:39,0:39:93.30:0,93,4432	0/0:33,0:33:81.21:0,81,4057	0/0:13,0:13:30.08:0,30,1081
chr10	38508655	.	CACT	C	756.23	PASS	AB=0.759;AC=12;AF=0.214;AN=56;BaseQRankSum=12.478;DP=1069;FS=23.388;HRun=0;HaplotypeScore=353.1356;InbreedingCoeff=-0.2502;MQ=54.69;MQ0=3;MQRankSum=-11.264;QD=1.62;ReadPosRankSum=5.142;VQSLOD=0.9739;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:30,6:36:1.89:2,0,461	0/1:11,8:19:26.60:27,0,372	0/0:39,0:36:82.73:0,83,2248	0/0:40,0:36:99:0,102,2212	0/1:12,9:21:12.77:13,0,141	0/0:32,0:32:93.06:0,93,2184	0/0:47,0:47:99:0,134,3190	0/0:46,0:46:99:0,138,3181	0/0:36,0:36:20.09:0,20,396	0/1:41,12:53:99:254,0,1913	0/1:14,9:22:0.24:0,0,372	0/1:48,17:64:18.77:19,0,1528	0/1:31,17:48:99:143,0,760	0/1:31,18:49:54.52:55,0,1408	0/1:41,16:56:83.61:84,0,1319	0/1:27,18:45:99:175,0,1269	0/0:26,1:27:41.99:0,42,908	0/1:22,6:27:99:112,0,592	0/0:30,0:29:87.30:0,87,2043	0/0:26,0:26:78.25:0,78,1858	0/0:132,0:132:99:0,373,8952	0/0:22,0:22:63.22:0,63,1454	0/1:14,8:22:15.79:16,0,530	0/0:21,7:28:7.02:0,7,160	0/0:20,0:20:60.21:0,60,1435	0/0:34,0:34:99:0,102,2489	0/0:33,0:33:96.31:0,96,2305	0/0:10,0:10:27.09:0,27,665
chr10	38508668	.	G	GCA	1592.79	PASS	AB=0.804;AC=12;AF=0.214;AN=56;BaseQRankSum=12.497;DP=1088;FS=35.939;HRun=0;HaplotypeScore=338.8698;InbreedingCoeff=-0.2717;MQ=54.72;MQ0=2;MQRankSum=-11.381;QD=3.30;ReadPosRankSum=1.341;VQSLOD=1.2690;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:34,3:38:40.96:41,0,538	0/1:10,8:18:99:122,0,299	0/0:41,0:37:88.55:0,89,1142	0/0:43,0:41:95.49:0,95,1327	0/1:15,8:23:29.86:30,0,153	0/0:26,0:26:69.05:0,69,947	0/0:45,0:45:99:0,106,1545	0/0:45,0:45:99:0,123,1685	0/0:40,0:40:41.64:0,42,569	0/1:42,8:50:99:254,0,1355	0/1:17,7:24:11.59:12,0,369	0/1:48,14:61:99:110,0,806	0/1:40,13:53:99:219,0,794	0/1:39,14:53:99:152,0,783	0/1:47,11:58:99:218,0,991	0/1:34,15:49:99:365,0,810	0/0:26,1:27:54.18:0,54,754	0/1:24,5:28:99:153,0,442	0/0:23,0:22:60.17:0,60,807	0/0:24,0:24:69.23:0,69,965	0/0:137,0:137:99:0,361,4874	0/0:24,0:24:63.19:0,63,863	0/1:18,7:25:68.79:69,0,189	0/0:26,4:30:18.04:0,18,252	0/0:24,0:24:69.67:0,70,927	0/0:37,0:37:99:0,108,1480	0/0:29,0:29:84.25:0,84,1140	0/0:9,0:9:18.06:0,18,252
chr10	38508728	.	G	GCT	6025.99	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-8.191;DP=828;FS=2.137;HRun=0;HaplotypeScore=165.4971;InbreedingCoeff=0.9984;MQ=66.67;MQ0=5;MQRankSum=-0.834;QD=30.90;ReadPosRankSum=2.306;VQSLOD=6.6188;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,30:42:69.12:1130,69,0	0/0:10,0:10:18.06:0,18,232	0/0:23,0:20:42.57:0,43,502	0/0:62,0:40:45:0,45,728	0/0:19,0:19:45.01:0,45,564	0/0:18,0:18:42.11:0,42,523	0/0:33,0:33:75.21:0,75,948	0/0:38,0:38:81.24:0,81,1017	0/0:35,0:35:81.24:0,81,1013	1/1:8,11:19:41.35:639,41,0	1/1:2,11:13:33.11:556,33,0	1/1:14,29:43:51.79:1425,52,0	0/0:30,0:30:72.23:0,72,925	0/0:33,0:33:69.21:0,69,871	0/0:38,0:38:99:0,99,1258	0/0:34,0:34:96.08:0,96,1142	0/0:22,0:22:48.10:0,48,587	1/1:4,27:31:60.21:1011,60,0	0/0:27,0:25:54.02:0,54,618	0/0:28,0:28:69.18:0,69,868	0/0:73,0:74:99:0,174,2218	0/0:21,0:20:36.09:0,36,434	1/1:3,16:21:36.12:607,36,0	1/1:5,20:25:39.13:657,39,0	0/0:21,0:21:39.12:0,39,488	0/0:25,0:25:66.06:0,66,796	0/0:23,0:23:42.05:0,42,538	0/0:19,0:19:47.90:0,48,575
chr10	38508761	.	CTCTT	C	739.15	PASS	AB=0.953;AC=14;AF=0.250;AN=56;BaseQRankSum=3.899;DP=773;FS=30.071;HRun=0;HaplotypeScore=199.3281;InbreedingCoeff=-0.3252;MQ=49.87;MQ0=21;MQRankSum=-3.288;QD=2.08;ReadPosRankSum=-2.359;VQSLOD=1.0104;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:16.28:0,16,309	0/1:9,0:9:38.67:39,0,68	0/0:27,0:7:9.69:0,10,105	0/0:47,0:7:4.97:0,5,71	0/0:18,0:18:38.31:0,38,319	0/1:15,1:16:20.26:20,0,200	0/0:28,0:28:56.14:0,56,472	0/0:42,0:42:34.86:0,35,754	0/1:25,0:26:1.68:2,0,383	0/1:30,0:30:16.44:16,0,531	0/0:13,0:13:32.49:0,32,254	0/0:42,0:42:67.90:0,68,651	0/0:27,0:27:4.71:0,5,275	0/0:25,0:24:21.66:0,22,309	0/0:32,0:30:17.61:0,18,438	0/0:25,0:25:27.09:0,27,408	0/1:17,0:17:22.29:22,0,137	0/0:25,0:24:41.62:0,42,737	0/1:25,0:22:28.37:28,0,295	0/0:31,0:31:11.85:0,12,397	0/1:50,0:50:86.82:87,0,542	0/1:24,0:23:2.57:3,0,127	0/1:21,0:21:7.20:7,0,245	0/1:29,0:29:38.91:39,0,219	0/1:14,10:24:57.19:57,0,195	0/1:23,13:35:99:392,0,295	0/1:28,0:28:99:103,0,141	0/1:20,0:17:71.44:71,0,211
chr10	38508765	.	TTCTC	T	2006.05	PASS	AB=0.940;AC=30;AF=0.556;AN=54;BaseQRankSum=1.654;DP=748;FS=7.605;HRun=0;HaplotypeScore=195.3251;InbreedingCoeff=0.1514;MQ=48.23;MQ0=23;MQRankSum=-1.937;QD=3.84;ReadPosRankSum=0.812;VQSLOD=2.0554;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:31,0:34:14.38:51,0,14	1/1:10,0:10:14.45:89,14,0	0/0:27,0:6:1.55:0,2,4	./.	0/0:19,0:19:7.60:0,8,50	1/1:14,0:14:4.58:40,5,0	0/0:26,0:28:19.85:0,20,130	0/1:42,0:42:25.41:25,0,51	0/1:23,0:24:45.21:45,0,61	0/0:30,0:30:41.26:0,41,577	0/0:12,0:12:9.03:0,9,144	0/0:40,0:42:7.83:0,8,64	0/1:27,0:27:37.06:72,0,37	0/1:25,0:24:8.83:9,0,37	0/1:29,0:27:9.73:62,0,10	0/1:23,0:23:19.72:20,0,40	1/1:17,0:17:13.22:109,13,0	0/0:25,0:24:32.46:0,32,478	1/1:24,0:22:15.28:132,15,0	1/1:19,11:31:11.22:107,11,0	1/1:47,0:46:2.08:360,2,0	0/1:6,15:23:2.73:104,0,3	1/1:18,0:20:3.17:14,3,0	0/1:26,0:29:7.57:8,0,54	1/1:21,2:23:11.39:124,11,0	1/1:32,1:32:8.38:452,8,0	1/1:9,19:27:11.65:191,12,0	0/1:20,0:17:12.15:167,0,12
chr10	38508783	.	C	CCT	1560.38	PASS	AB=0.879;AC=8;AF=0.148;AN=54;BaseQRankSum=0.019;DP=676;FS=9.466;HRun=0;HaplotypeScore=169.8232;InbreedingCoeff=-0.1792;MQ=47.28;MQ0=20;MQRankSum=-4.057;QD=9.13;ReadPosRankSum=-1.371;VQSLOD=2.4621;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:71.74:0,72,920	0/1:9,3:12:99:182,0,119	0/0:11,0:2:6.01:0,6,74	./.	0/1:17,1:18:51.43:51,0,383	0/0:15,0:15:36.10:0,36,482	0/0:31,0:31:70.73:0,71,953	0/0:31,0:30:90.29:0,90,1249	0/1:19,4:23:99:279,0,276	0/0:32,0:32:95.50:0,95,1337	0/0:15,0:13:23.21:0,23,332	0/0:34,0:34:77.96:0,78,984	0/1:22,3:25:99:206,0,361	0/1:21,2:22:99:102,0,139	0/1:31,2:31:99:553,0,423	0/1:19,2:21:99:117,0,344	0/1:11,5:15:99:205,0,123	0/0:24,0:23:62.79:0,63,855	0/0:16,0:16:44.50:0,44,585	0/0:32,0:31:53.02:0,53,710	0/0:38,0:37:84.23:0,84,1146	0/0:27,0:27:41.83:0,42,527	0/0:21,0:21:50.13:0,50,628	0/0:29,0:29:56.83:0,57,776	0/0:21,0:21:29.99:0,30,383	0/0:29,0:28:81.09:0,81,944	0/0:28,0:27:35.77:0,36,421	0/0:20,0:14:42.14:0,42,579
chr10	38509412	.	G	GA	6952.48	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-15.638;DP=724;FS=9.721;HRun=3;HaplotypeScore=66.7769;InbreedingCoeff=0.9986;MQ=92.34;MQ0=0;MQRankSum=-2.418;QD=34.42;ReadPosRankSum=4.815;VQSLOD=4.9266;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,126,1500	1/1:0,6:6:18.06:245,18,0	0/0:35,0:35:90.19:0,90,1025	0/0:24,0:24:45.08:0,45,508	1/1:1,30:31:87.20:1174,87,0	0/0:19,0:19:48.15:0,48,576	0/0:28,0:28:84.23:0,84,983	0/0:32,0:32:78.24:0,78,932	1/1:2,18:20:33.11:462,33,0	0/0:39,0:39:99:0,108,1278	0/0:16,0:16:48.15:0,48,575	0/0:31,0:31:90.28:0,90,1079	1/1:4,31:35:84.28:1171,84,0	1/1:0,18:18:51.17:708,51,0	1/1:2,20:22:54.18:756,54,0	1/1:2,25:27:72.24:1008,72,0	1/1:2,41:43:99:1428,102,0	0/0:16,0:16:48.11:0,48,548	0/0:22,0:22:60.18:0,60,719	0/0:24,0:24:69.21:0,69,826	0/0:26,0:26:72.22:0,72,864	0/0:20,0:20:60.17:0,60,710	0/0:19,0:19:57.17:0,57,682	0/0:28,0:28:84.26:0,84,1007	0/0:29,0:29:84.26:0,84,1008	0/0:31,0:31:87.26:0,87,1033	0/0:26,0:26:78.22:0,78,923	0/0:15,0:15:45.14:0,45,540
chr10	38512254	.	TCTGATCTGC	T	4565.80	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=11.181;DP=738;FS=5.850;HRun=0;HaplotypeScore=201.7004;InbreedingCoeff=0.9991;MQ=86.51;MQ0=0;MQRankSum=-9.993;QD=60.88;ReadPosRankSum=0.699;VQSLOD=4.3817;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,17:23:39.13:1092,39,0	0/0:9,0:9:27.09:0,27,1261	0/0:29,0:29:81.26:0,81,3058	0/0:25,0:25:60.18:0,60,2261	0/0:18,0:18:48.13:0,48,2033	0/0:18,0:18:51.16:0,51,2080	0/0:36,0:36:96.33:0,96,4442	0/0:28,0:28:75.22:0,75,3142	0/0:24,0:24:63.22:0,63,2844	1/1:5,18:23:57.18:1532,57,0	1/1:1,8:9:24.08:706,24,0	0/0:35,0:35:93.32:0,93,4293	0/0:38,0:38:99:0,105,4915	0/0:30,0:30:84.29:0,84,3905	0/0:29,0:29:78.25:0,78,3479	0/0:24,0:24:60.19:0,60,2704	0/0:31,0:31:87.28:0,87,3873	1/1:4,16:20:42.14:1236,42,0	0/0:20,0:20:54.16:0,54,2043	0/0:21,0:21:60.19:0,60,2677	0/0:71,0:71:99:0,190,8368	0/0:33,0:33:90.29:0,90,3978	0/0:21,0:21:51.18:0,51,2379	0/0:33,0:33:93.32:0,93,4176	0/0:19,0:19:54.19:0,54,2564	0/0:25,0:25:72.25:0,72,3385	0/0:27,0:27:72.25:0,72,3364	0/0:19,0:19:57.19:0,57,2502
chr10	38513875	.	C	CA	2285.45	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=1.099;DP=654;FS=3.602;HRun=7;HaplotypeScore=71.1748;InbreedingCoeff=0.9620;MQ=84.31;MQ0=0;MQRankSum=-1.693;QD=30.07;ReadPosRankSum=1.908;VQSLOD=4.2838;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:90.11:0,90,862	0/0:7,0:7:21.03:0,21,203	0/0:20,0:20:51.06:0,51,486	0/0:22,0:22:48.05:0,48,450	0/0:24,0:24:72.12:0,72,695	0/0:23,0:23:51.07:0,51,492	0/0:17,0:16:42.06:0,42,405	0/0:38,0:38:81.10:0,81,777	0/0:25,0:25:75.11:0,75,719	0/0:30,0:30:84.13:0,84,811	0/0:18,0:18:45.07:0,45,435	1/1:2,27:29:78.24:942,78,0	0/0:18,0:18:51.08:0,51,491	0/0:19,0:19:54.09:0,54,521	0/0:28,0:28:78.11:0,78,748	0/0:24,0:24:60.08:0,60,573	0/0:37,0:37:99:0,108,1043	0/0:30,0:30:69.11:0,69,666	0/0:23,0:23:60.09:0,60,579	0/0:15,0:15:42.06:0,42,405	0/0:19,0:19:48.06:0,48,457	0/0:34,0:34:96.13:0,96,920	1/1:2,14:16:42.13:507,42,0	1/1:3,28:31:81.25:979,81,0	0/0:21,0:21:60.10:0,60,579	0/0:22,0:22:63.10:0,63,608	0/0:26,0:26:75.12:0,75,724	0/0:2,0:2:5.98:0,6,50
chr10	38513928	.	TG	T	3404.20	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=5.525;DP=600;FS=18.948;HRun=3;HaplotypeScore=74.3956;InbreedingCoeff=0.9913;MQ=95.06;MQ0=0;MQRankSum=-3.164;QD=35.09;ReadPosRankSum=1.040;VQSLOD=1.8641;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,34:34:99:1264,102,0	0/0:11,0:11:33.11:0,33,474	0/0:27,0:27:39:0,39,942	0/0:28,0:28:63.81:0,64,936	0/0:17,0:17:45.14:0,45,630	0/0:24,0:24:69.23:0,69,993	0/0:23,0:22:69.22:0,69,975	0/0:25,0:25:75.25:0,75,1071	0/0:20,0:20:60.20:0,60,864	1/1:0,24:24:66.19:805,66,0	1/1:1,14:15:42.13:517,42,0	0/0:23,0:23:69.23:0,69,991	0/0:24,0:24:69.23:0,69,992	0/0:20,0:20:57.17:0,57,787	0/0:26,0:26:78.25:0,78,1106	0/0:17,0:17:51.17:0,51,734	0/0:36,0:36:99:0,108,1555	1/1:0,24:24:66.21:818,66,0	0/0:15,0:15:36.12:0,36,519	0/0:17,0:17:51.16:0,51,716	0/0:25,0:25:72.23:0,72,1020	0/0:17,0:17:45.15:0,45,648	0/0:17,0:17:48.12:0,48,636	0/0:27,0:27:78.26:0,78,1123	0/0:15,0:15:45.11:0,45,591	0/0:19,0:19:57.19:0,57,821	0/0:25,0:25:75.25:0,75,1080	0/0:4,0:4:12.01:0,12,151
chr10	38515198	.	G	GGTC	7017.19	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=7.498;DP=808;FS=6.681;HRun=0;HaplotypeScore=184.1267;InbreedingCoeff=0.9481;MQ=68.44;MQ0=1;MQRankSum=-5.943;QD=27.96;ReadPosRankSum=0.451;VQSLOD=4.3951;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:96.20:0,96,1275	0/1:8,0:8:1.04:152,0,1	0/0:24,0:18:35.98:0,36,374	0/0:30,0:26:59.96:0,60,593	1/1:25,0:25:32.18:341,32,0	0/0:27,0:26:66.12:0,66,850	0/0:26,0:26:60.04:0,60,657	0/0:29,0:29:63.10:0,63,711	1/1:29,3:33:60.41:807,60,0	0/0:30,0:30:57.14:0,57,728	0/0:14,0:14:24.01:0,24,274	0/0:39,0:39:95.78:0,96,937	1/1:26,2:28:63.03:842,63,0	1/1:38,0:38:94.33:1267,94,0	1/1:39,5:44:99:1593,116,0	1/1:38,1:39:86.83:1260,87,0	1/1:35,1:35:57.22:754,57,0	0/0:24,0:24:63.05:0,63,771	0/0:15,0:15:21.03:0,21,224	0/0:14,0:14:30.04:0,30,344	0/0:74,0:74:99:0,186,2454	0/0:17,0:17:38.94:0,39,511	0/0:22,0:22:47.91:0,48,450	0/0:32,0:32:66.23:0,66,598	0/0:29,0:29:57.08:0,57,667	0/0:30,0:30:68.99:0,69,848	0/0:32,0:32:86.97:0,87,1101	0/0:7,0:7:21.05:0,21,293
chr10	38515208	.	G	GTCGTCA	13656.04	PASS	AB=0.875;AC=15;AF=0.268;AN=56;BaseQRankSum=-1.047;DP=829;FS=7.771;HRun=0;HaplotypeScore=224.0622;InbreedingCoeff=0.9497;MQ=62.30;MQ0=2;MQRankSum=-5.445;QD=51.53;ReadPosRankSum=0.700;VQSLOD=3.8172;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,105,1947	0/1:6,1:7:1.03:239,0,1	0/0:27,0:19:47.89:0,48,489	0/0:35,0:31:92.78:0,93,896	1/1:21,5:26:41.61:528,42,0	0/0:24,0:23:66.12:0,66,1221	0/0:26,0:26:66.05:0,66,916	0/0:34,0:34:86.90:0,87,1144	1/1:26,9:35:90.87:1741,91,0	0/0:28,0:29:78.04:0,78,1205	0/0:16,0:16:35.92:0,36,467	0/0:27,0:45:99:0,128,1566	1/1:24,8:32:72.95:1592,73,0	1/1:29,15:44:99:2426,117,0	1/1:30,15:46:99:2924,128,0	1/1:25,17:42:90.27:2674,90,0	1/1:23,10:32:68.84:1532,69,0	0/0:26,0:26:72.08:0,72,1281	0/0:12,0:12:32.50:0,33,343	0/0:12,0:12:33.02:0,33,477	0/0:67,0:69:99:0,198,3793	0/0:22,0:22:53.83:0,54,867	0/0:11,0:19:48.05:0,48,632	0/0:16,0:33:80.92:0,81,990	0/0:25,0:26:60.08:0,60,967	0/0:32,0:32:89.85:0,90,1375	0/0:30,0:32:93.15:0,93,1689	0/0:9,0:9:26.98:0,27,493
chr10	38515248	.	GC	G	9762.46	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=16.266;DP=763;FS=4.880;HRun=8;HaplotypeScore=136.5471;InbreedingCoeff=0.9777;MQ=67.95;MQ0=0;MQRankSum=-5.522;QD=22.39;ReadPosRankSum=3.505;VQSLOD=3.4872;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,39:44:96.15:926,96,0	1/1:0,9:9:27.04:260,27,0	0/0:14,0:14:32.95:0,33,337	0/0:31,0:30:28.82:0,29,333	1/1:3,17:20:35.82:347,36,0	0/0:24,0:24:66.16:0,66,781	0/0:24,0:24:66.20:0,66,797	0/0:29,0:31:66.07:0,66,719	1/1:2,32:34:78.02:733,78,0	1/1:5,22:27:63.56:606,64,0	1/1:1,19:20:54.09:521,54,0	1/1:2,37:39:99:990,105,0	1/1:3,36:39:92.67:851,93,0	1/1:2,35:37:96.05:906,96,0	1/1:3,32:35:93.05:878,93,0	1/1:5,32:37:93.02:878,93,0	1/1:2,28:30:69.06:655,69,0	1/1:2,19:21:51.08:492,51,0	0/0:19,0:19:51.13:0,51,592	0/0:8,0:8:21.06:0,21,254	0/0:62,0:62:99:0,159,1869	0/0:23,0:23:63.18:0,63,741	1/1:3,9:12:23.71:214,24,0	1/1:10,22:32:53.97:505,54,0	0/0:20,0:20:45.09:0,45,517	0/0:26,3:29:3.79:0,4,738	0/0:28,0:27:72.22:0,72,869	0/0:14,0:14:42.10:0,42,482
chr10	38515578	.	ACC	A	4356.52	PASS	AB=0.848;AC=21;AF=0.375;AN=56;BaseQRankSum=5.476;DP=415;FS=0.543;HRun=12;HaplotypeScore=71.5791;InbreedingCoeff=0.5799;MQ=83.04;MQ0=0;MQRankSum=-1.216;QD=18.70;ReadPosRankSum=8.583;VQSLOD=3.3856;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:6.46:0,6,49	1/1:2,7:9:20.99:213,21,0	0/0:12,0:14:19.21:0,19,160	0/0:20,0:19:2.04:0,2,110	1/1:4,12:17:29.78:286,30,0	0/0:15,0:15:4.99:0,5,17	0/0:6,0:10:7.83:0,8,27	0/0:21,0:22:6.01:0,6,71	1/1:1,22:23:57.07:579,57,0	0/0:5,0:5:12.03:0,12,161	0/0:7,0:7:8.95:0,9,128	0/1:10,1:14:3.89:25,0,4	1/1:7,16:23:47.97:487,48,0	1/1:5,13:19:41.72:397,42,0	1/1:3,26:29:78.13:792,78,0	1/1:4,29:33:87.02:884,87,0	1/1:1,23:24:60.14:610,60,0	0/0:13,0:14:24.91:0,25,278	0/0:19,0:20:20.48:0,20,227	0/0:3,0:3:3.01:0,3,32	0/1:21,1:22:37.14:37,0,177	0/0:4,0:4:9:0,9,94	1/1:3,0:3:3:27,3,0	0/1:13,1:17:20:20,0,26	0/0:5,0:5:5.29:0,5,57	0/0:9,0:9:2.93:0,3,45	0/0:7,0:9:8.50:0,8,78	0/0:4,0:4:5.38:0,5,52
chr10	38521008	.	G	GAC	7857.29	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-4.950;DP=639;FS=1.556;HRun=0;HaplotypeScore=81.0925;InbreedingCoeff=0.9992;MQ=81.38;MQ0=1;MQRankSum=-3.256;QD=49.11;ReadPosRankSum=1.582;VQSLOD=6.0699;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:78.26:0,78,1149	1/1:0,9:9:21.07:393,21,0	0/0:16,0:16:39.13:0,39,564	0/0:20,0:20:57.11:0,57,775	1/1:4,27:31:78.27:1461,78,0	0/0:24,0:24:72.24:0,72,1059	0/0:21,0:21:63.21:0,63,927	0/0:41,0:41:99:0,114,1626	1/1:0,12:12:36.12:674,36,0	0/0:36,0:36:99:0,108,1557	0/0:23,0:23:69.23:0,69,1015	0/0:15,0:15:39.13:0,39,574	1/1:1,21:22:60.21:1124,60,0	1/1:0,18:17:51.17:955,51,0	1/1:0,19:19:51.17:955,51,0	1/1:0,19:19:48.16:899,48,0	1/1:2,26:30:75.26:1396,75,0	0/0:33,0:33:96.28:0,96,1362	0/0:23,0:23:69.20:0,69,975	0/0:26,0:26:78.26:0,78,1145	0/0:16,0:16:42.14:0,42,619	0/0:25,0:25:75.25:0,75,1104	0/0:25,0:25:72.23:0,72,1041	0/0:22,0:22:66.22:0,66,969	0/0:23,0:23:66.21:0,66,951	0/0:17,0:17:51.17:0,51,751	0/0:32,0:32:90.29:0,90,1301	0/0:11,0:11:33.11:0,33,483
chr10	38522305	.	GC	G	6780.04	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=3.087;DP=528;FS=8.925;HRun=1;HaplotypeScore=84.7362;InbreedingCoeff=0.9978;MQ=83.31;MQ0=0;MQRankSum=-2.269;QD=40.60;ReadPosRankSum=4.296;VQSLOD=4.9566;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:90.28:0,90,1398	1/1:0,16:16:48.16:670,48,0	0/0:13,0:13:38.62:0,39,558	0/0:19,0:19:54.18:0,54,833	1/1:0,14:14:36.12:503,36,0	0/0:15,0:15:45.13:0,45,659	0/0:30,0:30:90.24:0,90,1390	0/0:26,0:26:66.21:0,66,997	1/1:0,10:10:30.10:419,30,0	0/0:20,0:20:59.01:0,59,915	0/0:7,0:7:18.06:0,18,288	0/0:20,0:20:60.18:0,60,889	1/1:1,20:21:63.21:880,63,0	1/1:0,23:23:69.23:964,69,0	1/1:1,22:23:63.21:880,63,0	1/1:3,23:26:78.24:1058,78,0	1/1:1,33:34:99:1406,102,0	0/0:27,0:27:78.27:0,78,1243	0/0:12,0:12:36.12:0,36,571	0/0:9,0:9:27.09:0,27,430	0/0:28,0:28:81.17:0,81,1206	0/0:8,0:8:24.08:0,24,382	0/0:9,0:9:27.06:0,27,405	0/0:29,0:29:81.28:0,81,1288	0/0:21,0:21:63.20:0,63,983	0/0:12,0:12:33.11:0,33,527	0/0:13,0:13:39.13:0,39,612	0/0:12,0:12:36.12:0,36,569
chr10	38522368	.	C	CG	15608.62	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=7.729;DP=681;FS=10.405;HRun=1;HaplotypeScore=99.7496;InbreedingCoeff=0.9989;MQ=90.23;MQ0=0;MQRankSum=-2.518;QD=40.65;ReadPosRankSum=6.001;VQSLOD=4.0317;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,49:53:99:1973,132,0	1/1:1,14:15:45.12:623,45,0	0/0:27,0:26:75.22:0,75,934	0/0:28,0:28:60.45:0,60,811	1/1:1,24:25:63.21:928,63,0	0/0:20,0:20:57.18:0,57,738	0/0:24,0:24:66.21:0,66,855	0/0:25,0:25:75.19:0,75,940	1/1:0,17:17:51.17:763,51,0	1/1:2,23:25:69.20:979,69,0	1/1:0,14:14:39.11:577,39,0	1/1:0,22:22:66.22:989,66,0	1/1:1,25:26:75.25:1107,75,0	1/1:2,24:26:72.24:1067,72,0	1/1:4,16:20:57.19:832,57,0	1/1:1,21:22:63.20:925,63,0	1/1:2,35:37:99:1525,102,0	1/1:0,32:32:93.32:1393,93,0	0/0:13,0:13:39.13:0,39,505	0/0:22,0:22:66.21:0,66,856	0/0:30,0:30:81.25:0,81,1034	0/0:22,0:22:60.19:0,60,768	1/1:0,13:13:36.12:536,36,0	1/1:1,36:37:93.32:1393,93,0	0/0:27,0:27:78.22:0,78,982	0/0:33,1:34:57.39:0,57,1239	0/0:19,0:19:54.16:0,54,685	0/0:6,0:6:18.06:0,18,233
chr10	38522766	.	G	GCTAA	12036.06	PASS	AB=0.946;AC=15;AF=0.268;AN=56;BaseQRankSum=1.864;DP=721;FS=3.876;HRun=0;HaplotypeScore=145.4086;InbreedingCoeff=0.9075;MQ=82.13;MQ0=0;MQRankSum=-6.559;QD=55.47;ReadPosRankSum=0.450;VQSLOD=5.7648;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,37:42:99:2998,117,0	0/0:22,0:22:57.19:0,57,1076	0/0:22,0:22:39:0,39,952	0/0:22,0:22:57.19:0,57,1044	0/0:22,0:22:57.18:0,57,1071	0/0:19,0:19:54.19:0,54,1038	0/0:31,0:31:87.25:0,87,1567	0/0:28,0:28:72.24:0,72,1365	0/0:24,0:23:60.21:0,60,1144	1/1:7,18:26:75.25:1864,75,0	1/1:5,10:15:35.99:753,36,0	1/1:4,28:32:87.18:2194,87,0	0/0:29,0:29:75.26:0,75,1453	0/0:35,0:35:93.31:0,93,1744	0/0:35,0:35:93.31:0,93,1770	0/0:33,0:33:93.32:0,93,1793	0/0:30,0:30:87.25:0,87,1604	1/1:1,22:25:60.16:1581,60,0	0/0:14,0:14:33.11:0,33,640	0/0:16,0:16:48.15:0,48,896	0/0:48,0:48:99:0,141,2645	0/0:22,0:22:62.99:0,63,1141	1/1:1,17:19:48.08:1188,48,0	1/1:0,20:23:51.18:1396,51,0	0/0:23,0:23:63.22:0,63,1211	0/1:33,2:35:61.68:62,0,1748	0/0:23,0:23:62.84:0,63,1174	0/0:6,0:6:18.06:0,18,346
chr10	38522932	.	G	GTC	1940.12	PASS	AB=0.813;AC=11;AF=0.196;AN=56;BaseQRankSum=7.388;DP=803;FS=1.138;HRun=0;HaplotypeScore=175.1461;InbreedingCoeff=0.1743;MQ=48.70;MQ0=50;MQRankSum=-0.451;QD=6.83;ReadPosRankSum=1.155;VQSLOD=3.2781;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:34:3:0,3,25	1/1:5,8:13:7.79:107,8,0	0/0:20,0:8:21.04:0,21,277	0/0:65,0:19:30.06:0,30,408	0/0:13,14:25:8.81:0,9,71	0/0:16,0:16:27.09:0,27,454	0/0:26,0:25:25.18:0,25,539	0/0:26,0:26:57.96:0,58,832	0/1:23,7:28:5.99:443,0,6	0/0:23,0:19:21.17:0,21,220	0/0:17,0:17:23.40:0,23,192	0/1:30,0:28:24.86:25,0,79	0/1:23,21:43:95.05:180,0,95	1/1:31,12:42:12.57:552,13,0	0/1:23,15:38:55.88:94,0,56	0/1:24,8:32:40.53:494,0,41	0/1:14,12:25:99:142,0,125	0/1:27,0:27:30.90:56,0,31	0/0:15,0:13:12.67:0,13,354	0/0:10,0:9:15.04:0,15,194	0/0:74,0:72:99:0,156,2199	0/0:27,0:24:16.26:0,16,625	0/0:17,0:14:27.07:0,27,302	0/0:45,0:43:32.71:0,33,450	0/0:27,0:26:59.41:0,59,811	0/0:26,0:25:72.20:0,72,957	0/0:16,0:16:45.08:0,45,599	0/0:5,0:5:14.72:0,15,182
chr10	38522934	.	CTGTCTG	C	523.37	PASS	AB=0.912;AC=13;AF=0.232;AN=56;BaseQRankSum=6.151;DP=791;FS=7.756;HRun=0;HaplotypeScore=207.9970;InbreedingCoeff=0.2382;MQ=48.38;MQ0=50;MQRankSum=3.186;QD=1.92;ReadPosRankSum=1.425;VQSLOD=1.6381;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,33:35:2.99:24,3,0	0/1:13,0:13:6.96:7,0,36	0/0:18,0:8:14.82:0,15,103	0/0:61,0:17:27.09:0,27,222	0/0:24,0:22:9.03:0,9,165	0/0:18,0:18:38.94:0,39,385	0/0:25,0:25:17.13:0,17,414	0/0:25,0:24:47.16:0,47,474	0/1:25,0:26:34.38:34,0,184	1/1:6,16:18:36.88:337,37,0	1/1:13,2:15:23.22:198,23,0	0/1:30,0:28:13.11:13,0,16	0/0:43,0:42:4.71:0,5,450	0/1:42,0:42:4.68:5,0,274	0/0:37,0:37:11.88:0,12,203	0/1:30,0:32:21.38:21,0,330	0/1:24,0:23:7.50:8,0,438	0/1:6,22:28:34.68:35,0,36	0/0:14,0:12:3.52:0,4,397	0/0:11,0:10:18.03:0,18,294	0/0:75,0:73:99:0,113,1798	0/0:27,0:25:40.41:0,40,683	0/0:18,0:15:26.93:0,27,255	0/0:45,0:43:44.16:0,44,578	0/0:28,0:27:59.40:0,59,1017	0/0:25,0:24:68.99:0,69,1142	0/0:17,0:17:42.38:0,42,601	0/0:5,0:5:10.15:0,10,228
chr10	38522940	.	G	GTC	928.84	PASS	AB=0.998;AC=12;AF=0.214;AN=56;BaseQRankSum=6.692;DP=798;FS=1.584;HRun=0;HaplotypeScore=185.0678;InbreedingCoeff=-0.1101;MQ=47.31;MQ0=54;MQRankSum=2.909;QD=2.75;ReadPosRankSum=1.255;VQSLOD=2.8537;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:38:5.98:0,6,47	0/1:14,0:13:21.21:21,0,41	0/0:15,0:5:14.80:0,15,114	0/0:45,0:13:26.87:0,27,228	0/0:24,0:22:11.83:0,12,114	0/1:21,0:21:18.17:18,0,214	0/0:29,0:28:16.70:0,17,378	0/0:23,0:22:54.61:0,55,437	0/1:29,0:27:93.18:93,0,105	0/0:24,0:20:15.34:0,15,225	0/0:16,0:16:23.42:0,23,197	0/0:10,20:27:4.99:0,5,28	0/1:41,0:40:25.91:26,0,325	0/1:45,0:44:88.79:188,0,89	0/1:37,0:37:29.24:29,0,106	0/1:33,0:33:99:162,0,133	0/1:27,0:25:13.84:14,0,247	1/1:26,0:25:7.12:39,7,0	0/0:16,0:14:8.65:0,9,325	0/0:12,0:10:14.76:0,15,149	0/0:71,0:69:99:0,134,1341	0/0:28,0:25:23.99:0,24,390	0/1:17,0:14:13.32:142,0,13	0/1:47,1:44:99:348,0,121	0/0:34,0:33:66.01:0,66,674	0/0:26,0:25:65.77:0,66,637	0/0:18,0:18:37.05:0,37,354	0/0:8,0:8:12.73:0,13,127
chr10	38523841	.	AG	A	4775.96	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=9.757;DP=555;FS=0.734;HRun=8;HaplotypeScore=63.5369;InbreedingCoeff=0.9218;MQ=73.01;MQ0=1;MQRankSum=-1.057;QD=25.27;ReadPosRankSum=6.286;VQSLOD=4.8968;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,99,1144	1/1:1,3:4:9.01:87,9,0	0/0:25,0:19:23.75:0,24,340	0/0:17,0:16:14.71:0,15,160	1/1:0,17:17:48:446,48,0	0/0:25,0:25:69.19:0,69,809	0/0:32,0:32:87.15:0,87,1005	0/0:14,0:14:30.05:0,30,327	1/1:1,14:15:33.03:319,33,0	0/0:13,0:13:30.09:0,30,362	0/0:13,0:13:36.07:0,36,400	0/0:3,0:3:3:0,3,25	1/1:3,31:34:93.06:885,93,0	1/1:2,21:23:54.08:520,54,0	1/1:0,23:23:62.75:608,63,0	1/1:2,20:22:57.08:550,57,0	1/1:3,48:51:99:1361,141,0	0/0:29,0:29:78.22:0,78,930	0/0:16,0:16:36.07:0,36,392	0/0:19,0:19:51.16:0,51,615	0/0:40,0:40:93.23:0,93,1072	0/0:18,0:18:39.08:0,39,436	0/0:4,0:4:5.59:0,6,34	0/0:1,0:4:5.72:0,6,29	0/0:14,0:14:39.11:0,39,460	0/0:16,0:16:39.12:0,39,471	0/0:19,0:18:57.16:0,57,674	0/0:8,0:8:24.04:0,24,266
chr10	38524854	.	A	ATTT	6215.25	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=1.315;DP=538;FS=11.708;HRun=13;HaplotypeScore=94.8307;InbreedingCoeff=0.9619;MQ=64.80;MQ0=1;MQRankSum=-2.148;QD=20.79;ReadPosRankSum=-1.883;VQSLOD=2.1955;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,1:39:54.10:428,54,0	1/1:3,3:7:12.04:196,12,0	0/0:13,0:11:15.49:0,15,99	0/0:5,0:4:2.91:0,3,18	1/1:4,14:21:51.11:741,51,0	0/0:20,0:22:52.38:0,52,582	0/0:11,0:15:23.87:0,24,255	0/0:23,0:23:50.85:0,51,541	1/1:4,12:22:33.02:464,33,0	1/1:4,2:17:29.01:295,29,0	1/1:2,0:9:19.17:151,19,0	1/1:10,8:22:31.14:462,31,0	1/1:4,11:17:33.07:508,33,0	1/1:3,6:13:12.04:213,12,0	1/1:3,8:21:37.61:541,38,0	1/1:2,13:15:33.56:560,34,0	1/1:12,6:30:31.57:400,32,0	1/1:5,4:34:54.75:505,55,0	0/0:23,0:25:33.86:0,34,405	0/0:11,0:14:26.76:0,27,274	0/0:29,0:29:56.91:0,57,613	0/0:9,0:12:28.39:0,28,290	1/1:1,8:12:18.90:262,19,0	1/1:3,13:18:30.08:491,30,0	0/0:19,0:20:26.55:0,27,275	0/0:23,0:25:28.03:0,28,476	0/0:14,0:17:20.82:0,21,238	0/0:15,0:15:35.91:0,36,387
chr10	38524973	.	C	CA	1367.52	PASS	AB=0.811;AC=12;AF=0.214;AN=56;BaseQRankSum=-3.959;DP=513;FS=5.809;HRun=13;HaplotypeScore=65.0449;InbreedingCoeff=0.1923;MQ=70.99;MQ0=3;MQRankSum=1.075;QD=6.77;ReadPosRankSum=-1.285;VQSLOD=2.0569;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,13:22:42.54:406,43,0	0/0:9,0:9:23.72:0,24,160	0/1:15,0:14:23.39:38,0,23	0/1:10,0:8:0.06:0,0,31	0/0:23,2:28:6.07:0,6,308	0/0:20,1:22:30.61:0,31,340	0/1:8,1:10:10.99:11,0,71	0/1:25,1:29:21.37:21,0,236	0/0:13,0:13:6.03:0,6,161	0/1:10,13:23:1.25:262,0,1	1/1:5,13:19:21.29:323,21,0	0/0:1,0:15:26.39:0,26,77	0/0:17,0:18:34.59:0,35,225	0/0:10,1:12:0.93:0,1,142	0/0:15,0:15:29.66:0,30,204	0/0:14,0:16:39.75:0,40,258	0/0:18,1:19:19.61:0,20,275	0/1:7,16:27:2.78:212,0,3	0/0:17,0:19:36.92:0,37,233	0/0:18,2:23:7.14:0,7,249	0/0:8,0:9:7.86:0,8,47	0/0:19,1:22:20.83:0,21,272	0/0:1,0:12:22.41:0,22,66	0/0:2,0:13:17.85:0,18,52	0/1:10,16:29:76.10:210,0,76	0/1:12,2:15:34.89:35,0,137	0/0:20,2:25:0.98:0,1,269	0/0:17,0:20:5.88:0,6,250
chr10	38526507	.	TC	T	2619.22	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.752;DP=696;FS=8.724;HRun=2;HaplotypeScore=66.3347;InbreedingCoeff=0.9999;MQ=83.13;MQ0=0;MQRankSum=-1.487;QD=34.46;ReadPosRankSum=3.639;VQSLOD=3.8933;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,138,2057	0/0:11,0:11:33.10:0,33,476	0/0:13,0:13:39.06:0,39,548	0/0:27,0:27:75.24:0,75,1080	0/0:24,0:24:63.21:0,63,943	0/0:20,0:20:60.20:0,60,897	0/0:33,0:33:96.30:0,96,1417	0/0:30,0:30:90.30:0,90,1331	0/0:21,0:21:60.19:0,60,879	0/0:19,0:19:57.19:0,57,855	0/0:16,0:16:45.15:0,45,673	1/1:0,36:36:99:1325,102,0	0/0:30,0:30:84.28:0,84,1256	0/0:21,0:21:60.20:0,60,899	0/0:35,0:35:99:0,99,1483	0/0:26,0:26:78.26:0,78,1151	0/0:29,0:29:84.28:0,84,1259	0/0:24,0:24:72.24:0,72,1077	0/0:27,0:27:81.24:0,81,1178	0/0:30,0:30:87.24:0,87,1221	0/0:32,0:32:96.33:0,96,1438	0/0:24,0:24:72.23:0,72,1060	1/1:1,16:17:48.16:619,48,0	1/1:0,23:23:63.20:818,63,0	0/0:20,0:20:60.20:0,60,899	0/0:20,0:20:57.18:0,57,833	0/0:23,0:23:66.22:0,66,989	0/0:17,0:17:51.14:0,51,739
chr10	38527926	.	AG	A	194.53	PASS	AB=1.000;AC=13;AF=0.464;AN=28;BaseQRankSum=2.335;DP=41;FS=0.000;HRun=1;HaplotypeScore=16.5420;InbreedingCoeff=0.4026;MQ=114.73;MQ0=1;MQRankSum=-2.491;QD=13.89;ReadPosRankSum=2.491;VQSLOD=2.6701;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:3,0:3:3.02:3,0,40	./.	0/0:8,0:3:0.74:0,1,71	0/0:8,0:6:8.84:0,9,78	1/1:0,3:3:6.02:70,6,0	0/0:3,0:3:9.02:0,9,121	0/0:1,0:1:3:0,3,25	0/0:1,0:1:3:0,3,27	1/1:0,2:2:6.02:81,6,0	0/0:2,0:2:6.01:0,6,76	./.	./.	1/1:0,1:1:3.01:40,3,0	1/1:2,0:2:6.01:63,6,0	1/1:2,0:2:2.37:8,2,0	./.	1/1:0,1:1:3.01:39,3,0	./.	./.	./.	./.	./.	./.	0/0:1,0:1:3:0,3,25	./.	./.	./.	./.
chr10	38528387	.	TACC	T	1084.06	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=-1.108;DP=314;FS=16.948;HRun=0;HaplotypeScore=68.9719;InbreedingCoeff=0.5688;MQ=64.70;MQ0=1;MQRankSum=-0.116;QD=11.18;ReadPosRankSum=4.220;VQSLOD=1.6618;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:22.42:0,22,144	1/1:2,0:2:2.99:24,3,0	0/0:14,0:8:8.97:0,9,337	0/0:9,0:7:16.86:0,17,258	1/1:12,1:13:1.16:104,1,0	0/0:7,0:7:17.66:0,18,137	0/0:16,0:16:44.57:0,45,397	0/0:14,0:13:35.24:0,35,332	0/1:8,0:8:9.11:65,0,9	0/0:15,0:14:34.90:0,35,132	0/0:6,0:6:7.15:0,7,45	0/0:19,0:17:36.01:0,36,194	1/1:9,1:9:26.60:195,27,0	1/1:9,1:10:8.70:147,9,0	0/1:17,0:17:7.54:188,0,8	0/1:13,0:13:9.50:150,0,10	1/1:23,1:24:20.37:374,20,0	0/0:11,0:11:20.20:0,20,107	0/0:6,0:5:15:0,15,134	0/0:7,0:7:20.97:0,21,197	0/0:9,0:9:23.99:0,24,229	0/0:4,0:4:9:0,9,77	0/0:11,0:11:23.33:0,23,94	0/0:14,0:14:31.13:0,31,118	0/0:9,0:9:24:0,24,207	0/0:9,0:10:26.85:0,27,272	0/0:9,0:9:20.76:0,21,182	0/0:1,0:1:3.01:0,3,30
chr10	38528389	.	CCA	C	522.70	PASS	AB=0.930;AC=11;AF=0.196;AN=56;BaseQRankSum=-0.827;DP=316;FS=17.250;HRun=0;HaplotypeScore=64.9956;InbreedingCoeff=0.3056;MQ=64.73;MQ0=1;MQRankSum=1.942;QD=4.67;ReadPosRankSum=2.276;VQSLOD=0.2678;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:22,2:24:13.60:175,0,14	0/0:2,0:2:0.47:0,0,1	0/0:15,0:8:20.85:0,21,307	0/0:12,0:7:15.51:0,16,225	0/0:13,0:13:20.90:0,21,87	0/0:7,0:7:11.91:0,12,65	0/0:16,0:16:37.82:0,38,241	0/0:13,0:12:14.86:0,15,231	0/0:8,0:8:8.55:0,9,43	1/1:15,0:14:5.32:62,5,0	0/1:5,1:6:11.25:41,0,11	0/1:19,1:18:20.10:105,0,20	0/0:10,0:9:2.57:0,3,27	0/1:11,0:11:3.71:4,0,29	0/0:17,0:17:26.25:0,26,115	0/0:13,0:13:25.54:0,26,105	0/0:23,0:23:8.70:0,9,94	0/1:10,1:11:11.37:74,0,11	0/0:6,0:5:14.60:0,15,100	0/0:8,0:8:15.14:0,15,131	0/0:9,0:9:23.34:0,23,161	0/0:4,0:4:8.59:0,9,43	1/1:10,1:11:1.54:77,2,0	1/1:14,0:14:13.59:128,14,0	0/0:9,0:9:23:0,23,119	0/0:9,0:9:22.94:0,23,182	0/0:9,0:9:19.56:0,20,116	0/0:1,0:1:2.22:0,2,7
chr10	38528391	.	ACCC	A	2649.44	PASS	AB=0.548;AC=17;AF=0.304;AN=56;BaseQRankSum=-9.811;DP=321;FS=8.059;HRun=10;HaplotypeScore=63.8696;InbreedingCoeff=0.7904;MQ=64.49;MQ0=2;MQRankSum=1.216;QD=21.54;ReadPosRankSum=3.250;VQSLOD=1.2870;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:4,1:23:18:18,0,23	1/1:0,2:2:3.01:41,3,0	0/0:15,0:8:15.88:0,16,323	0/0:12,0:7:18.04:0,18,273	1/1:2,11:13:24.04:296,24,0	0/0:2,0:7:17.94:0,18,140	0/0:4,0:16:38.86:0,39,324	0/0:6,0:12:19.18:0,19,159	1/1:1,7:8:12.03:164,12,0	0/0:2,0:14:15.84:0,16,36	0/0:2,0:6:2.12:0,2,6	0/0:5,0:18:20.95:0,21,87	1/1:1,10:10:27.09:368,27,0	1/1:3,8:11:21.07:286,21,0	1/1:2,15:17:36.11:491,36,0	1/1:1,12:13:30.10:409,30,0	1/1:4,21:25:57.17:774,57,0	0/0:4,0:11:14.30:0,14,60	0/0:4,0:5:8.97:0,9,70	0/0:2,0:8:17.95:0,18,155	0/0:3,0:9:17.95:0,18,163	0/0:0,0:4:8.97:0,9,70	0/0:2,0:11:11.21:0,11,25	0/0:2,0:15:17.95:0,18,60	0/0:0,0:9:23.90:0,24,185	0/0:5,0:9:23.93:0,24,240	0/0:4,0:9:14.76:0,15,139	0/0:1,0:1:2.99:0,3,24
chr10	38529472	.	T	TCA	9595.14	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-17.135;DP=789;FS=1.384;HRun=0;HaplotypeScore=82.7501;InbreedingCoeff=0.9992;MQ=87.60;MQ0=0;MQRankSum=-5.602;QD=46.35;ReadPosRankSum=3.518;VQSLOD=6.4732;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:75,0:75:99:0,220,3192	1/1:1,8:9:21.07:392,21,0	0/0:32,0:32:90.26:0,90,1249	0/0:23,0:23:66.14:0,66,889	1/1:1,23:24:60.21:1121,60,0	0/0:23,0:23:66.22:0,66,970	0/0:28,0:28:84.24:0,84,1195	0/0:27,0:27:78.26:0,78,1149	1/1:0,22:22:51.17:955,51,0	0/0:21,0:21:57.19:0,57,838	0/0:19,0:19:51.17:0,51,749	0/0:38,0:38:99:0,108,1547	1/1:3,26:30:66.23:1236,66,0	1/1:0,24:24:66.23:1236,66,0	1/1:1,30:31:81.28:1508,81,0	1/1:0,36:36:84.29:1573,84,0	1/1:1,30:31:84.29:1573,84,0	0/0:19,0:19:51.17:0,51,743	0/0:32,0:32:96.29:0,96,1345	0/0:28,0:28:84.27:0,84,1216	0/0:53,0:53:99:0,156,2251	0/0:25,0:25:72.24:0,72,1060	0/0:23,0:23:69.23:0,69,1016	0/0:37,0:37:99:0,108,1568	0/0:15,0:15:45.15:0,45,661	0/0:33,0:33:99:0,99,1439	0/0:21,0:21:60.19:0,60,858	0/0:10,0:10:30.10:0,30,432
chr10	38532940	.	AGTACCT	A	3468.57	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=10.733;DP=689;FS=4.224;HRun=0;HaplotypeScore=149.8536;InbreedingCoeff=0.9979;MQ=89.12;MQ0=0;MQRankSum=-11.491;QD=58.79;ReadPosRankSum=0.734;VQSLOD=4.0381;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,138,4708	0/0:10,0:10:30.10:0,30,1080	0/0:25,0:25:75.26:0,75,2351	0/0:31,0:30:81.28:0,81,2398	0/0:17,0:17:48.16:0,48,1599	0/0:25,0:25:75.26:0,75,2564	0/0:22,0:22:66.23:0,66,2327	0/0:41,0:41:99:0,120,4075	0/0:23,0:23:69.20:0,69,2311	0/0:22,0:22:66.23:0,66,2356	0/0:10,0:10:27.08:0,27,876	1/1:2,28:30:84.25:1959,84,0	0/0:30,0:30:87.30:0,87,3065	0/0:30,0:30:90.28:0,90,3098	0/0:19,0:19:57.20:0,57,1871	0/0:30,0:30:90.31:0,90,3138	0/0:33,0:33:93.32:0,93,3220	0/0:41,0:41:99:0,117,3989	0/0:27,0:27:75.25:0,75,2472	0/0:20,0:20:57.18:0,57,1889	0/0:42,0:42:99:0,123,4335	0/0:18,0:18:54.19:0,54,1913	1/1:0,13:14:42.14:1005,42,0	1/1:2,13:15:20.80:505,21,0	0/0:17,0:17:51.18:0,51,1747	0/0:20,0:20:60.21:0,60,2138	0/0:14,0:14:42.14:0,42,1507	0/0:17,0:17:45.15:0,45,1514
chr10	38534073	.	AGTGTGTGT	A	299.93	PASS	AB=0.944;AC=20;AF=0.417;AN=48;BaseQRankSum=3.882;DP=541;FS=3.543;HRun=0;HaplotypeScore=131.3441;InbreedingCoeff=0.5530;MQ=55.10;MQ0=25;MQRankSum=-4.039;QD=1.65;ReadPosRankSum=-1.012;VQSLOD=2.2917;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:22:7.07:0,7,51	1/1:3,5:8:8.54:109,9,0	./.	./.	1/1:14,0:14:0.88:2,1,0	1/1:10,0:12:0.47:1,0,0	0/1:20,0:22:0:0,0,0	0/0:34,0:32:3.56:0,4,13	1/1:11,1:12:1.22:70,1,0	0/0:12,0:12:6:0,6,52	./.	1/1:16,0:16:6.02:87,6,0	./.	0/1:16,0:13:0:0,0,0	0/0:15,2:17:0.47:0,0,1	1/1:12,2:14:2.96:20,3,0	1/1:24,0:23:3:73,3,0	0/0:25,0:27:8.60:0,9,263	0/0:10,0:10:9.01:0,9,231	0/0:15,0:13:15.05:0,15,481	0/0:43,0:41:8.98:0,9,166	0/0:14,0:14:15.03:0,15,365	1/1:7,3:10:2.97:20,3,0	1/1:29,1:28:3.95:51,4,0	0/0:11,0:9:6.02:0,6,154	0/0:19,0:18:15.94:0,16,506	0/0:16,0:16:21.06:0,21,493	0/0:15,0:17:12.02:0,12,280
chr10	38534131	.	TGTGTTA	T	1381.29	PASS	AB=1.000;AC=12;AF=0.214;AN=56;BaseQRankSum=1.410;DP=555;FS=3.016;HRun=0;HaplotypeScore=119.9817;InbreedingCoeff=0.5271;MQ=60.82;MQ0=46;MQRankSum=1.782;QD=8.42;ReadPosRankSum=0.968;VQSLOD=2.3971;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:35,0:31:54.66:748,55,0	0/1:15,0:14:7.47:7,0,176	0/0:25,0:18:54.18:0,54,873	0/0:30,0:21:58.91:0,59,860	0/0:19,0:17:35.72:0,36,363	0/0:18,0:15:32.58:0,33,502	0/0:24,0:21:38.83:0,39,606	0/0:17,0:17:33.07:0,33,496	0/0:14,0:12:16.23:0,16,221	1/1:11,0:10:18.02:267,18,0	1/1:6,8:11:4.59:38,5,0	0/1:17,0:15:12.80:13,0,272	0/0:16,0:14:3.93:0,4,25	0/0:12,0:10:3.48:0,3,31	0/0:23,0:21:34.01:0,34,331	0/0:13,0:13:33.05:0,33,324	0/1:30,0:25:5.80:6,0,31	1/1:26,0:23:32.14:454,32,0	0/1:14,0:14:11.62:12,0,500	0/0:13,0:11:30.09:0,30,597	0/0:34,0:28:57.67:0,58,1039	0/0:15,0:15:32:0,32,535	0/0:22,0:21:39.08:0,39,413	0/0:24,0:19:24.11:0,24,228	0/0:16,0:14:36.12:0,36,592	0/0:18,0:17:45.15:0,45,917	0/0:20,0:20:53.90:0,54,829	0/0:18,0:16:38.52:0,39,678
chr10	38534135	.	TTA	T	1233.21	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-0.572;DP=557;FS=2.426;HRun=0;HaplotypeScore=96.0482;InbreedingCoeff=0.8284;MQ=66.26;MQ0=35;MQRankSum=1.753;QD=15.04;ReadPosRankSum=2.016;VQSLOD=3.2811;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:34,0:32:53.76:700,54,0	0/0:15,0:14:21.05:0,21,228	0/0:26,0:20:60.20:0,60,961	0/0:33,0:24:63.08:0,63,921	0/0:23,0:21:47.94:0,48,521	0/0:19,0:16:36.12:0,36,535	0/0:23,0:22:42.14:0,42,653	0/0:22,0:22:48.12:0,48,740	0/0:13,0:12:24.02:0,24,249	1/1:3,7:9:21.07:272,21,0	1/1:14,0:11:5.01:39,5,0	0/0:15,0:15:35.79:0,36,348	0/0:15,0:14:2.99:0,3,24	0/0:12,0:10:3.01:0,3,30	0/0:26,0:24:42.05:0,42,423	0/0:13,0:13:33.06:0,33,324	0/0:28,0:25:3.01:0,3,36	1/1:22,0:20:30.08:374,30,0	0/0:14,0:14:27.09:0,27,446	0/0:12,0:11:27.09:0,27,431	0/0:27,0:25:60.18:0,60,899	0/0:15,0:15:36.11:0,36,513	0/0:23,0:22:42.10:0,42,442	0/0:24,0:20:24.05:0,24,250	0/0:16,0:14:33.10:0,33,485	0/0:17,0:17:44.36:0,44,697	0/0:19,0:19:45.15:0,45,708	0/0:20,0:18:45.15:0,45,642
chr10	38534137	.	A	ATA	3785.63	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=1.583;DP=557;FS=0.504;HRun=0;HaplotypeScore=86.1159;InbreedingCoeff=0.8942;MQ=69.21;MQ0=33;MQRankSum=-1.275;QD=17.05;ReadPosRankSum=0.785;VQSLOD=3.7106;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:30:50.40:0,50,260	1/1:14,0:14:19.62:280,20,0	0/0:29,0:22:35.69:0,36,693	0/0:34,0:25:54.64:0,55,673	1/1:22,0:22:39.13:602,39,0	0/0:20,0:18:33.01:0,33,383	0/0:23,0:22:42.08:0,42,494	0/0:25,0:25:39.11:0,39,476	1/1:13,0:12:21.06:280,21,0	0/0:9,0:8:20.02:0,20,102	0/1:13,0:10:0.10:0,0,0	1/1:17,0:15:36.05:498,36,0	1/1:5,9:14:2.69:17,3,0	1/1:11,0:9:3.01:35,3,0	1/1:25,0:23:36.11:568,36,0	1/1:13,0:13:33.11:522,33,0	1/1:30,0:26:1.82:5,2,0	0/0:24,0:21:28.72:0,29,158	0/0:13,0:13:27.09:0,27,345	0/0:12,0:11:24.07:0,24,293	0/0:27,0:25:56.97:0,57,717	0/0:15,0:15:29.99:0,30,330	1/1:23,0:22:42.14:629,42,0	1/1:26,0:21:24.08:348,24,0	0/0:17,0:15:30.03:0,30,347	0/0:16,0:16:38.99:0,39,498	0/0:19,0:19:45.13:0,45,559	0/0:20,0:18:45.12:0,45,544
chr10	38534139	.	A	ATA	3785.21	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=1.583;DP=563;FS=0.504;HRun=0;HaplotypeScore=92.1178;InbreedingCoeff=0.8942;MQ=70.19;MQ0=29;MQRankSum=-0.385;QD=16.75;ReadPosRankSum=0.698;VQSLOD=3.6068;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:30:50.81:0,51,261	1/1:14,0:14:19.61:279,20,0	0/0:29,0:22:35.69:0,36,693	0/0:35,0:26:54.64:0,55,673	1/1:24,0:24:39.13:602,39,0	0/0:20,0:18:33.01:0,33,383	0/0:23,0:22:42.08:0,42,494	0/0:24,0:24:39.11:0,39,476	1/1:14,0:13:21.06:280,21,0	0/0:10,0:9:20.02:0,20,102	0/1:16,0:13:0.10:0,0,0	1/1:17,0:15:36.05:498,36,0	1/1:16,0:16:2.69:17,3,0	1/1:4,5:9:3.01:35,3,0	1/1:24,0:22:36.12:568,36,0	1/1:13,0:13:33.11:522,33,0	1/1:31,0:27:1.82:5,2,0	0/0:23,0:20:28.72:0,29,158	0/0:14,0:14:27.09:0,27,345	0/0:12,0:11:24.07:0,24,293	0/0:27,0:26:56.97:0,57,717	0/0:15,0:15:29.99:0,30,330	1/1:22,0:22:42.14:629,42,0	1/1:25,0:20:24.08:348,24,0	0/0:17,0:15:30.03:0,30,347	0/0:16,0:16:38.99:0,39,498	0/0:19,0:19:45.13:0,45,559	0/0:21,0:19:45.12:0,45,544
chr10	38534145	.	A	ATA	3778.98	PASS	AB=1.000;AC=21;AF=0.389;AN=54;BaseQRankSum=1.438;DP=498;FS=0.000;HRun=0;HaplotypeScore=75.6232;InbreedingCoeff=0.9160;MQ=81.42;MQ0=11;MQRankSum=-0.203;QD=23.92;ReadPosRankSum=1.015;VQSLOD=4.0215;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:51.02:0,51,261	1/1:8,0:8:19.62:279,20,0	0/0:33,0:26:35.69:0,36,693	0/0:39,0:30:54.64:0,55,673	1/1:24,0:24:39.13:602,39,0	0/0:16,0:16:33.01:0,33,383	0/0:19,0:18:42.08:0,42,494	0/0:24,0:24:39.11:0,39,476	1/1:10,0:10:21.06:280,21,0	0/0:9,0:9:20.02:0,20,102	0/1:12,0:11:0.10:0,0,0	1/1:16,0:15:36.05:498,36,0	1/1:14,0:14:2.69:17,3,0	1/1:6,0:6:3.01:35,3,0	1/1:20,0:20:36.12:567,36,0	1/1:13,0:13:33.11:522,33,0	./.	0/0:15,0:15:28.72:0,29,158	0/0:14,0:14:27.09:0,27,345	0/0:13,0:13:24.07:0,24,293	0/0:26,0:26:57.18:0,57,718	0/0:15,0:15:29.99:0,30,330	1/1:19,0:19:42.14:629,42,0	1/1:16,0:16:24.08:348,24,0	0/0:14,0:14:30.03:0,30,347	0/0:14,0:14:38.99:0,39,498	0/0:17,0:17:45.13:0,45,559	0/0:20,0:20:45.12:0,45,544
chr10	38536830	.	T	TTCC	5613.48	PASS	AB=0.710;AC=8;AF=0.143;AN=56;BaseQRankSum=12.194;DP=722;FS=1.266;HRun=0;HaplotypeScore=163.1987;InbreedingCoeff=-0.1689;MQ=51.13;MQ0=16;MQRankSum=-11.010;QD=25.63;ReadPosRankSum=3.445;VQSLOD=5.0722;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:75.18:0,75,1146	0/1:5,6:11:99:351,0,166	0/0:20,0:9:12.06:0,12,126	0/0:17,0:9:15.61:0,16,176	0/1:17,6:23:99:401,0,185	0/0:29,0:28:62.93:0,63,1204	0/0:31,0:31:87.20:0,87,1225	0/0:29,0:21:54.18:0,54,842	0/1:8,13:21:99:780,0,265	0/0:38,0:38:99:0,105,1641	0/0:12,0:12:24.08:0,24,383	0/0:27,0:27:66.22:0,66,1033	0/1:21,16:37:99:1156,0,465	0/1:20,7:25:99:446,0,443	0/1:21,16:36:99:1182,0,428	0/1:21,13:29:99:668,0,424	0/1:17,9:25:99:630,0,391	0/0:29,0:27:48.97:0,49,1037	0/0:29,0:24:63.20:0,63,949	0/0:14,0:14:36.11:0,36,546	0/0:36,0:35:99:0,99,1553	0/0:22,0:22:57.17:0,57,864	0/0:13,0:12:30.09:0,30,458	0/0:29,0:29:63.20:0,63,985	0/0:26,0:25:72.23:0,72,1129	0/0:30,0:28:84.25:0,84,1243	0/0:25,0:24:62.38:0,62,988	0/0:15,0:14:33.11:0,33,521
chr10	38536880	.	C	CCT	11445.46	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-2.529;DP=758;FS=9.056;HRun=0;HaplotypeScore=107.6112;InbreedingCoeff=0.9882;MQ=63.11;MQ0=0;MQRankSum=0.110;QD=40.16;ReadPosRankSum=5.340;VQSLOD=6.7034;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:87.28:0,87,1246	1/1:1,4:5:9.03:163,9,0	0/0:39,0:21:13.85:0,14,588	0/0:46,0:23:38.91:0,39,420	1/1:4,18:24:51.17:886,51,0	0/0:23,0:22:68.43:0,68,948	0/0:27,0:27:75.15:0,75,964	0/0:20,0:19:54.07:0,54,683	1/1:2,21:23:45.15:830,45,0	0/0:37,0:37:99:0,102,1459	0/0:15,0:15:41.99:0,42,551	1/1:0,32:32:81.28:1496,81,0	1/1:5,28:34:81.28:1496,81,0	1/1:3,20:22:51.12:887,51,0	1/1:3,28:32:75.20:1328,75,0	1/1:4,28:31:63.22:1146,63,0	1/1:2,32:34:69.24:1274,69,0	0/0:27,0:26:72.23:0,72,1025	0/0:9,0:9:24:0,24,305	0/0:20,0:20:57.18:0,57,816	0/0:44,0:44:99:0,117,1634	0/0:34,0:34:99:0,102,1437	1/1:1,14:16:36:665,36,0	1/1:0,29:29:69.24:1275,69,0	0/0:32,0:32:90.30:0,90,1299	0/0:27,0:27:81.26:0,81,1153	0/0:28,0:28:75.25:0,75,1079	0/0:10,0:10:27.07:0,27,374
chr10	38538125	.	AACACACACACAC	A	1011.30	PASS	AB=0.683;AC=5;AF=0.093;AN=54;BaseQRankSum=3.956;DP=646;FS=7.882;HRun=0;HaplotypeScore=230.4791;InbreedingCoeff=0.8498;MQ=61.86;MQ0=17;MQRankSum=-2.612;QD=16.58;ReadPosRankSum=0.051;VQSLOD=1.4693;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:15,13:28:0:0,0,0	0/0:6,0:5:11.92:0,12,260	0/0:29,0:15:21.04:0,21,443	0/0:31,0:23:28.32:0,28,768	0/0:18,0:18:30.10:0,30,1304	0/0:17,0:17:27.56:0,28,1067	0/0:32,0:31:47.99:0,48,2119	0/0:34,0:34:49.96:0,50,1690	0/0:28,0:26:47.05:0,47,1630	1/1:8,13:21:39.08:1003,39,0	./.	0/0:23,0:21:33.11:0,33,1434	0/0:29,0:28:50.58:0,51,1597	0/0:22,0:21:15.01:0,15,405	0/0:25,0:24:33.09:0,33,1438	0/0:30,0:30:42.12:0,42,1685	0/0:34,0:34:61.40:0,61,2216	1/1:8,3:12:5.54:118,6,0	0/0:21,0:21:26.09:0,26,828	0/0:11,0:11:27.08:0,27,885	0/0:31,0:30:45.15:0,45,1936	0/0:16,0:19:30.05:0,30,947	0/0:21,0:21:39.13:0,39,1451	0/0:30,0:26:45.15:0,45,2043	0/0:18,0:15:33.11:0,33,1387	0/0:26,1:26:52.72:0,53,2231	0/0:20,0:20:45.15:0,45,1993	0/0:14,0:13:24.08:0,24,919
chr10	38538155	.	CAGAGAGAGAGAGAGAGAGAG	C	1452.41	PASS	AC=12;AF=0.261;AN=46;BaseQRankSum=6.322;DP=572;FS=0.000;HRun=0;HaplotypeScore=249.7110;InbreedingCoeff=0.7013;MQ=45.11;MQ0=17;MQRankSum=-5.153;QD=10.84;ReadPosRankSum=1.067;VQSLOD=2.0060;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:1.89:0,2,5	1/1:3,0:3:3.01:106,3,0	./.	./.	./.	0/0:9,0:16:8.60:0,9,130	0/0:27,0:26:24.07:0,24,723	0/0:29,0:28:19.31:0,19,490	1/1:18,1:27:15.48:379,15,0	0/0:20,0:20:28.61:0,29,1199	./.	0/0:20,0:18:18.06:0,18,952	1/1:17,4:22:23.82:822,24,0	1/1:10,9:19:0.94:1,1,0	./.	1/1:15,2:23:3.01:96,3,0	1/1:24,10:34:2.44:186,2,0	0/0:16,0:15:24.08:0,24,1598	0/0:16,0:19:30.10:0,30,1356	0/0:8,0:8:6.02:0,6,214	0/0:42,0:41:46.04:0,46,2487	0/0:18,0:17:12.04:0,12,690	0/0:14,0:14:3.01:0,3,99	0/0:33,0:29:36.12:0,36,2603	0/0:18,0:15:9.02:0,9,368	0/0:26,0:25:39.60:0,40,2087	0/0:25,0:25:27.08:0,27,1750	0/0:13,0:12:18.06:0,18,838
chr10	38541472	.	G	GA	774.67	PASS	AB=0.887;AC=12;AF=0.214;AN=56;BaseQRankSum=1.204;DP=501;FS=3.297;HRun=13;HaplotypeScore=60.6009;InbreedingCoeff=0.0818;MQ=59.24;MQ0=8;MQRankSum=-0.031;QD=3.99;ReadPosRankSum=-0.814;VQSLOD=0.6359;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:12,26:37:19.40:316,19,0	0/0:9,0:9:11.23:0,11,76	0/1:15,0:4:2.06:2,0,29	0/1:16,0:8:20.37:32,0,20	0/0:22,0:24:12.05:0,12,195	0/0:13,0:13:0.67:0,1,101	0/0:15,0:15:31.77:0,32,217	0/0:23,1:25:29.20:0,29,252	0/0:9,0:8:11.75:0,12,80	0/1:9,11:20:16.79:179,0,17	1/1:3,17:20:8.91:205,9,0	0/0:17,0:17:31.24:0,31,209	0/1:14,0:14:1.58:2,0,91	0/0:20,0:21:13.70:0,14,192	0/0:13,0:13:0.98:0,1,140	0/0:13,0:13:3.16:0,3,147	0/0:21,0:23:45.57:0,46,298	0/1:9,15:24:11.12:143,0,11	0/1:17,1:17:20.83:21,0,171	0/0:19,1:20:15.16:0,15,220	0/0:12,0:14:0.30:0,0,115	0/0:16,0:15:17.99:0,18,111	0/1:13,1:16:11.64:12,0,124	0/0:15,0:15:29.70:0,30,205	0/0:23,0:23:40.38:0,40,261	0/0:16,1:17:2.29:0,2,158	0/0:18,2:18:13.70:0,14,234	0/1:13,0:12:4:4,0,120
chr10	38542915	.	AC	A	4008.39	PASS	AB=0.978;AC=27;AF=0.482;AN=56;BaseQRankSum=0.988;DP=425;FS=5.333;HRun=10;HaplotypeScore=59.2223;InbreedingCoeff=0.6657;MQ=79.06;MQ0=0;MQRankSum=0.524;QD=16.43;ReadPosRankSum=4.980;VQSLOD=4.0659;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:9,20:30:71.02:604,71,0	1/1:1,8:10:20.03:162,20,0	0/1:10,0:10:24.14:24,0,56	0/0:14,0:14:6.84:0,7,148	1/1:6,10:17:40.95:331,41,0	0/0:9,0:10:19.09:0,19,156	0/0:5,0:18:8.69:0,9,61	0/0:12,0:12:20.20:0,20,136	1/1:4,14:18:41.99:364,42,0	1/1:3,6:9:14.99:130,15,0	1/1:3,6:9:2.14:160,2,0	0/0:19,0:19:45.03:0,45,439	1/1:10,15:25:44.97:387,45,0	1/1:4,13:18:47.03:396,47,0	1/1:5,11:16:29.98:260,30,0	1/1:5,17:22:56.02:475,56,0	1/1:4,16:20:47.99:416,48,0	1/1:1,11:14:34.07:272,34,0	0/0:12,0:12:17.71:0,18,161	0/0:5,0:11:7.36:0,7,77	0/0:10,0:19:5.68:0,6,28	0/0:0,0:6:5.84:0,6,40	0/0:20,0:20:48.06:0,48,482	0/0:16,0:16:39.02:0,39,396	0/1:11,0:11:13.42:13,0,53	0/1:10,1:14:13.17:13,0,41	0/0:6,0:16:2.84:0,3,14	0/0:4,0:8:8.86:0,9,81
chr10	38543491	.	A	AC	2762.21	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.099;DP=667;FS=0.473;HRun=1;HaplotypeScore=70.4980;InbreedingCoeff=0.9968;MQ=99.54;MQ0=0;MQRankSum=-4.738;QD=37.84;ReadPosRankSum=2.640;VQSLOD=4.2789;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,126,1590	0/0:10,0:10:30.08:0,30,375	0/0:40,0:40:99:0,117,1453	0/0:30,0:30:72.18:0,72,873	0/0:20,0:19:60.19:0,60,761	0/0:19,0:19:54.12:0,54,667	0/0:29,0:29:76.82:0,77,1066	0/0:32,0:32:93.28:0,93,1188	0/0:19,0:19:54.16:0,54,686	0/0:23,0:23:63.20:0,63,805	0/0:17,0:17:51.15:0,51,648	1/1:1,20:21:57.19:838,57,0	0/0:13,0:13:39.13:0,39,504	0/0:12,0:12:33.11:0,33,428	0/0:27,0:26:78.24:0,78,996	0/0:26,0:26:69.21:0,69,881	0/0:26,0:26:72.18:0,72,901	0/0:23,0:23:66.17:0,66,838	0/0:21,0:21:63.16:0,63,774	0/0:22,0:22:63.17:0,63,789	0/0:26,0:26:75.18:0,75,939	0/0:26,0:26:78.24:0,78,998	1/1:0,22:22:63.21:944,63,0	1/1:4,26:30:75.25:1124,75,0	0/0:18,0:18:54.17:0,54,690	0/0:30,0:30:84.26:0,84,1066	0/0:36,0:35:99:0,105,1342	0/0:6,0:6:18.06:0,18,234
chr10	38546501	.	CT	C	3228.29	PASS	AB=0.893;AC=35;AF=0.625;AN=56;BaseQRankSum=12.759;DP=666;FS=13.674;HRun=12;HaplotypeScore=89.7227;InbreedingCoeff=0.6256;MQ=82.13;MQ0=2;MQRankSum=0.423;QD=6.83;ReadPosRankSum=5.489;VQSLOD=0.7810;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,1:33:53.91:170,54,0	1/1:2,6:8:14.94:116,15,0	0/1:43,0:36:3.51:4,0,215	0/1:21,1:15:14.81:15,0,39	1/1:5,21:26:50.65:387,51,0	0/1:14,2:17:55.13:55,0,233	0/0:26,0:27:66.01:0,66,628	0/0:24,2:27:10.86:0,11,421	1/1:2,21:25:48.89:360,49,0	1/1:4,0:14:18.88:57,19,0	1/1:2,0:22:34.38:100,34,0	1/1:5,0:18:24.43:71,24,0	1/1:2,26:29:55.81:424,56,0	1/1:4,21:26:55.82:424,56,0	1/1:6,14:20:29.86:232,30,0	1/1:5,18:24:19.40:324,19,0	1/1:7,21:29:51.82:383,52,0	1/1:2,0:21:33.03:95,33,0	0/0:23,0:25:36.28:0,36,479	0/0:25,1:26:39.24:0,39,558	0/0:22,0:22:45.06:0,45,440	0/0:20,2:23:6.78:0,7,449	1/1:6,0:29:38.68:112,39,0	1/1:1,0:16:20.37:59,20,0	0/0:16,1:17:21.64:0,22,379	0/1:27,4:31:12.39:12,0,426	0/0:23,0:26:28.42:0,28,465	0/1:10,3:13:36.67:37,0,198
chr10	38547628	.	G	GC	5048.18	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-11.375;DP=513;FS=5.492;HRun=6;HaplotypeScore=54.6722;InbreedingCoeff=0.9791;MQ=84.44;MQ0=0;MQRankSum=-2.743;QD=33.43;ReadPosRankSum=0.015;VQSLOD=4.9355;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,34:37:99:1245,99,0	0/0:2,0:2:6.01:0,6,61	0/0:17,0:17:25.32:0,25,289	0/0:19,0:19:31.45:0,31,378	0/0:16,0:16:45.10:0,45,459	0/0:17,0:17:48.08:0,48,485	0/0:25,0:25:69.15:0,69,703	0/0:13,0:13:27.04:0,27,267	0/0:22,0:22:63.14:0,63,637	1/1:3,14:17:45.08:546,45,0	1/1:2,9:11:27.09:339,27,0	1/1:1,23:26:72.21:889,72,0	0/0:16,0:16:45.10:0,45,459	0/0:15,0:15:39.05:0,39,388	0/0:17,0:17:51.10:0,51,514	0/0:20,0:20:51.11:0,51,515	0/0:28,0:28:72.11:0,72,718	1/1:2,18:20:57.18:715,57,0	0/0:12,0:12:24.05:0,24,245	0/0:12,0:12:36.08:0,36,367	0/0:38,0:38:96.16:0,96,954	0/0:12,0:12:33.08:0,33,337	1/1:1,9:10:30.09:371,30,0	1/1:2,28:30:75.24:943,75,0	0/0:18,0:18:45.10:0,45,459	0/0:17,0:17:45.10:0,45,459	0/0:16,0:16:48.08:0,48,477	0/0:10,0:10:21.04:0,21,214
chr10	38548099	.	GAC	G	1436.46	PASS	AB=0.873;AC=16;AF=0.296;AN=54;BaseQRankSum=0.065;DP=769;FS=12.752;HRun=0;HaplotypeScore=117.1843;InbreedingCoeff=0.1422;MQ=65.70;MQ0=14;MQRankSum=-0.203;QD=4.24;ReadPosRankSum=2.418;VQSLOD=2.0233;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,2:44:20.81:0,21,606	0/0:11,0:11:14.71:0,15,125	0/0:47,0:22:0:0,0,0	./.	0/0:30,0:30:38.86:0,39,308	0/0:18,0:24:18.01:0,18,191	0/0:24,0:34:38.99:0,39,393	0/1:31,0:28:4.50:4,0,134	0/0:21,0:22:27.70:0,28,284	0/0:30,0:30:14.60:0,15,523	0/0:17,0:16:15.04:0,15,203	1/1:12,19:34:50.47:507,50,0	0/0:21,0:22:12.80:0,13,182	0/0:31,0:31:53.67:0,54,432	0/0:19,0:19:29.93:0,30,251	0/0:22,0:21:47.87:0,48,396	0/0:22,0:22:35.86:0,36,277	0/1:24,5:32:99:115,0,501	0/1:16,2:18:53.46:53,0,60	0/1:19,4:23:63.86:64,0,318	0/1:40,6:48:55.25:55,0,715	0/1:22,2:23:32.75:33,0,357	1/1:10,5:15:11.95:117,12,0	0/1:22,9:33:3.50:291,0,3	1/1:12,11:23:14.36:234,14,0	0/1:27,3:31:60.12:60,0,470	0/1:18,2:21:44.76:45,0,318	0/1:5,1:6:24.26:24,0,82
chr10	38548113	.	C	CAG	4884.89	PASS	AB=1.000;AC=18;AF=0.321;AN=56;BaseQRankSum=-7.873;DP=830;FS=2.938;HRun=0;HaplotypeScore=112.8523;InbreedingCoeff=0.7905;MQ=56.62;MQ0=19;MQRankSum=1.855;QD=19.31;ReadPosRankSum=8.645;VQSLOD=4.6935;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:95.81:0,96,1020	1/1:1,12:13:4.27:220,4,0	0/0:56,0:19:43.72:0,44,397	0/0:59,0:20:40.85:0,41,401	1/1:3,27:30:9.63:653,10,0	0/1:23,0:23:3.42:3,0,344	0/1:40,0:39:67.94:68,0,534	0/0:30,0:27:66.86:0,67,640	1/1:1,25:26:28.09:735,28,0	0/0:30,0:30:80.83:0,81,853	0/0:18,0:17:47.87:0,48,430	0/0:39,0:39:89.26:0,89,679	1/1:4,21:26:2.14:374,2,0	1/1:3,25:29:26.76:851,27,0	1/1:2,18:20:16.04:450,16,0	1/1:9,12:20:37.52:839,38,0	1/1:1,24:25:36.12:691,36,0	0/0:34,0:34:95.90:0,96,997	0/0:15,0:14:36.23:0,36,287	0/0:23,0:23:52.63:0,53,577	0/0:62,0:62:99:0,116,1345	0/0:22,0:21:47.98:0,48,512	0/0:20,0:20:35.78:0,36,276	0/0:40,0:40:99:0,100,776	0/0:23,0:23:43.51:0,44,338	0/0:34,0:34:95.83:0,96,975	0/0:22,0:22:48:0,48,568	0/0:7,0:7:20.92:0,21,201
chr10	38548435	.	A	AAC	5835.52	PASS	AB=0.559;AC=14;AF=0.250;AN=56;BaseQRankSum=-8.599;DP=800;FS=2.034;HRun=0;HaplotypeScore=130.7037;InbreedingCoeff=0.8227;MQ=72.84;MQ0=2;MQRankSum=0.201;QD=27.66;ReadPosRankSum=6.397;VQSLOD=5.8144;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:61,0:61:99:0,129,1537	1/1:1,10:11:23.82:387,24,0	0/0:39,0:36:54.05:0,54,613	0/0:36,0:31:56.78:0,57,626	1/1:5,1:17:20.64:184,21,0	0/0:23,0:23:54.15:0,54,643	0/0:34,0:33:78.18:0,78,915	0/0:24,0:24:54.15:0,54,639	0/1:4,21:25:6.60:902,0,7	0/0:25,0:26:72.04:0,72,840	0/0:24,0:24:66.16:0,66,773	0/0:3,0:33:73.15:0,73,355	0/1:9,25:34:30.74:1031,0,31	1/1:8,25:34:32.82:1016,33,0	1/1:6,21:27:23.86:883,24,0	1/1:5,19:25:51.17:823,51,0	1/1:5,1:37:68.89:608,69,0	0/0:27,0:29:77.90:0,78,900	0/0:20,0:20:42.12:0,42,499	0/0:24,0:24:57.14:0,57,676	0/0:57,0:60:99:0,153,1778	0/0:22,0:22:48.11:0,48,567	0/0:4,0:17:22.73:0,23,112	0/0:7,0:28:22.73:0,23,112	0/0:21,0:23:47.77:0,48,521	0/0:34,0:34:81.23:0,81,960	0/0:23,0:24:62.96:0,63,700	0/0:8,0:8:14.77:0,15,170
chr10	38550030	.	TC	T	2409.83	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=11.772;DP=728;FS=5.045;HRun=4;HaplotypeScore=72.8134;InbreedingCoeff=0.9630;MQ=88.78;MQ0=0;MQRankSum=-1.264;QD=30.50;ReadPosRankSum=1.902;VQSLOD=4.2178;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,132,1845	0/0:10,0:10:24.08:0,24,336	0/0:28,0:28:75.19:0,75,990	0/0:29,0:29:69.19:0,69,928	0/0:28,0:28:81.26:0,81,1113	0/0:25,0:25:72.24:0,72,1007	0/0:32,0:32:93.23:0,93,1199	0/0:40,0:40:99:0,114,1517	0/0:25,0:25:75.24:0,75,1034	0/0:22,0:22:63.20:0,63,854	0/0:20,0:20:60.18:0,60,804	1/1:1,24:25:63.19:755,63,0	0/0:20,0:20:54.17:0,54,737	0/0:21,0:21:60.20:0,60,839	0/0:25,0:25:72.19:0,72,934	0/0:25,0:25:75.25:0,75,1049	0/0:30,0:30:84.25:0,84,1140	0/0:35,0:35:93.21:0,93,1239	0/0:21,0:21:57.18:0,57,773	0/0:27,0:27:72.23:0,72,990	0/0:31,0:31:93.29:0,93,1282	0/0:30,0:30:87.28:0,87,1200	1/1:0,27:27:78.24:935,78,0	1/1:1,26:27:72.22:863,72,0	0/0:23,0:23:69.21:0,69,944	0/0:26,0:26:77.26:0,77,1007	0/0:29,0:29:78.21:0,78,1035	0/0:2,0:2:6.02:0,6,84
chr10	38554158	.	G	GAT	2476.10	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-9.830;DP=564;FS=3.249;HRun=0;HaplotypeScore=69.2509;InbreedingCoeff=0.9809;MQ=77.15;MQ0=1;MQRankSum=-2.817;QD=33.46;ReadPosRankSum=0.749;VQSLOD=5.2572;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,17:20:42.14:697,42,0	0/0:13,0:13:36.12:0,36,457	0/0:19,0:18:33.09:0,33,394	0/0:23,0:23:8.45:0,8,393	0/0:34,0:33:87.24:0,87,1067	0/0:21,0:21:57.18:0,57,725	0/0:15,0:15:39.03:0,39,464	0/0:34,0:34:69.30:0,69,1111	0/0:27,0:27:78.25:0,78,993	1/1:0,14:14:39.09:585,39,0	1/1:1,11:13:27.09:452,27,0	0/0:19,0:19:51.15:0,51,635	0/0:16,0:16:48.12:0,48,582	0/0:16,0:16:36.05:0,36,425	0/0:24,0:24:60.19:0,60,764	0/0:14,0:14:30.10:0,30,382	0/0:20,0:19:51.16:0,51,648	1/1:2,25:27:54.18:903,54,0	0/0:18,0:18:36.12:0,36,458	0/0:21,0:21:60.18:0,60,749	0/0:19,0:19:48.09:0,48,555	0/0:11,0:11:27.08:0,27,331	0/0:13,0:13:30.08:0,30,367	0/0:16,0:16:42.07:0,42,501	0/0:27,0:27:72.19:0,72,887	0/0:22,0:22:60.19:0,60,763	0/0:30,0:30:63.18:0,63,775	0/0:17,0:17:42.13:0,42,534
chr10	38555926	.	CTGA	C	3567.17	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=11.300;DP=673;FS=0.000;HRun=0;HaplotypeScore=94.7501;InbreedingCoeff=0.9993;MQ=68.83;MQ0=3;MQRankSum=-1.556;QD=45.15;ReadPosRankSum=4.194;VQSLOD=4.8353;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,117,2633	0/0:12,0:12:30.10:0,30,687	0/0:26,0:22:56.39:0,56,1296	0/0:24,0:21:51.65:0,52,1135	0/0:22,0:22:66.21:0,66,1438	0/0:23,0:23:63.22:0,63,1426	0/0:27,0:27:78.27:0,78,1799	0/0:29,0:29:87.30:0,87,2005	0/0:13,0:13:39.13:0,39,898	0/0:27,0:27:81.26:0,81,1804	0/0:10,0:10:27.09:0,27,623	1/1:1,27:28:75.26:1266,75,0	0/0:26,0:26:78.27:0,78,1795	0/0:23,0:23:63.22:0,63,1449	0/0:19,0:19:57.20:0,57,1315	0/0:27,0:27:81.28:0,81,1841	0/0:28,0:28:78.25:0,78,1731	0/0:27,0:27:78.25:0,78,1751	0/0:23,0:21:60.20:0,60,1322	0/0:30,0:30:90.30:0,90,2021	0/0:41,0:41:99:0,120,2696	0/0:21,0:21:63.22:0,63,1452	1/1:0,23:23:60.21:1023,60,0	1/1:1,27:28:75.26:1278,75,0	0/0:24,0:24:69.22:0,69,1547	0/0:22,0:22:66.23:0,66,1523	0/0:18,0:18:54.19:0,54,1237	0/0:11,0:11:33.11:0,33,748
chr10	38556006	.	T	TAG	4979.15	PASS	AB=0.920;AC=15;AF=0.268;AN=56;BaseQRankSum=5.758;DP=637;FS=2.245;HRun=0;HaplotypeScore=88.2025;InbreedingCoeff=0.9067;MQ=70.99;MQ0=0;MQRankSum=0.848;QD=29.82;ReadPosRankSum=-1.518;VQSLOD=5.9520;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:24:56.05:742,56,0	0/0:11,0:11:33.10:0,33,406	0/0:37,0:31:56.24:0,56,606	0/0:22,0:16:24.71:0,25,293	0/0:29,0:29:49.22:0,49,803	0/0:28,0:28:69.20:0,69,836	0/0:22,0:22:54.14:0,54,632	0/0:21,0:21:42.13:0,42,517	0/0:14,0:14:30.08:0,30,356	1/1:31,0:31:72.13:1035,72,0	1/1:18,0:18:42.14:644,42,0	1/1:8,11:20:42.13:659,42,0	0/0:27,0:27:63.20:0,63,775	0/0:21,0:21:53.51:0,54,612	0/0:17,0:17:39.12:0,39,480	0/0:20,0:20:45.14:0,45,553	0/1:21,2:23:43.59:44,0,525	1/1:18,0:18:21.30:530,21,0	0/0:20,0:20:51.13:0,51,612	0/0:30,0:30:78.24:0,78,959	0/0:23,0:23:60.18:0,60,727	0/0:27,0:27:69.19:0,69,818	1/1:10,8:18:39.11:597,39,0	1/1:2,13:15:45.15:729,45,0	0/0:26,0:26:60.09:0,60,703	0/0:35,0:35:87.27:0,87,1060	0/0:27,0:27:75.23:0,75,911	0/0:10,0:10:19.12:0,19,320
chr10	38556021	.	A	AG	1173.61	PASS	AB=0.865;AC=9;AF=0.161;AN=56;BaseQRankSum=14.067;DP=641;FS=0.834;HRun=1;HaplotypeScore=84.9940;InbreedingCoeff=0.3289;MQ=76.47;MQ0=0;MQRankSum=-2.617;QD=7.93;ReadPosRankSum=4.582;VQSLOD=1.1175;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:15,12:27:62.15:243,0,62	0/0:15,0:15:45.14:0,45,605	0/0:37,0:28:84.13:0,84,1048	0/0:27,0:20:48.03:0,48,570	0/0:30,0:30:90.22:0,90,1175	0/0:26,0:26:78.26:0,78,1083	0/0:22,0:22:63.18:0,63,827	0/0:19,0:19:54.18:0,54,745	0/0:11,0:11:30.10:0,30,416	1/1:14,18:32:12.76:491,13,0	1/1:5,13:18:23.91:268,24,0	0/1:19,0:19:28.24:28,0,158	0/0:26,0:26:78.26:0,78,1078	0/0:19,0:19:57.18:0,57,773	0/0:16,0:16:48.15:0,48,651	0/0:16,0:16:48.16:0,48,668	0/0:22,0:22:51.16:0,51,797	0/1:8,11:19:23.42:219,0,23	0/0:25,0:25:72.21:0,72,969	0/0:30,0:30:87.29:0,87,1207	0/0:23,0:23:69.20:0,69,925	0/0:24,0:24:72.21:0,72,960	0/1:16,0:16:28.21:28,0,72	0/1:17,0:17:28.11:47,0,28	0/0:25,0:25:72.17:0,72,970	0/0:38,0:38:99:0,111,1474	0/0:27,0:27:81.27:0,81,1127	0/0:15,0:15:34.01:0,34,538
chr10	38556022	.	A	AG	1101.13	PASS	AB=0.655;AC=5;AF=0.089;AN=56;BaseQRankSum=9.896;DP=642;FS=0.502;HRun=0;HaplotypeScore=84.8109;InbreedingCoeff=0.3459;MQ=77.10;MQ0=0;MQRankSum=-4.518;QD=11.47;ReadPosRankSum=3.054;VQSLOD=4.2887;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:15,12:27:47.64:267,0,48	0/0:15,0:15:45.14:0,45,614	0/0:38,0:29:83.99:0,84,1088	0/0:27,0:20:48.04:0,48,590	0/0:31,0:31:90.27:0,90,1209	0/0:26,0:26:78.26:0,78,1091	0/0:22,0:22:66.17:0,66,854	0/0:19,0:19:57.18:0,57,780	0/0:11,0:11:33.10:0,33,441	0/1:14,18:32:18.72:470,0,19	1/1:5,13:18:24.45:268,24,0	0/0:20,0:20:57.05:0,57,575	0/0:26,0:26:78.26:0,78,1090	0/0:19,0:19:57.18:0,57,781	0/0:16,0:16:48.15:0,48,653	0/0:16,0:16:48.16:0,48,668	0/0:21,0:21:62.93:0,63,834	0/1:8,11:19:23.56:219,0,24	0/0:24,0:24:72.23:0,72,988	0/0:31,0:31:87.29:0,87,1208	0/0:23,0:23:69.21:0,69,931	0/0:23,0:23:69.21:0,69,930	0/0:17,0:17:45.02:0,45,445	0/0:17,0:17:50.91:0,51,442	0/0:25,0:25:72.23:0,72,987	0/0:37,0:37:99:0,111,1488	0/0:27,0:27:81.27:0,81,1132	0/0:15,0:15:45.11:0,45,591
chr10	38557302	.	GTATA	G	5774.54	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=9.163;DP=702;FS=18.733;HRun=0;HaplotypeScore=121.0605;InbreedingCoeff=0.9986;MQ=73.42;MQ0=2;MQRankSum=-2.644;QD=47.72;ReadPosRankSum=2.618;VQSLOD=4.4518;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,33:33:75.26:1423,75,0	0/0:10,0:10:27.09:0,27,644	0/0:23,0:23:61.70:0,62,1393	0/0:18,0:18:51.09:0,51,1107	0/0:34,0:34:93.32:0,93,2473	0/0:27,0:27:72.25:0,72,1943	0/0:21,0:21:60.21:0,60,1570	0/0:23,0:23:69.24:0,69,1837	0/0:19,0:19:45.15:0,45,1183	1/1:0,35:35:99:1904,105,0	1/1:0,32:31:84.29:1593,84,0	0/0:23,0:23:66.23:0,66,1692	0/0:35,0:35:99:0,102,2743	0/0:22,0:22:66.23:0,66,1736	0/0:23,0:24:69.17:0,69,1775	0/0:27,0:27:81.28:0,81,2113	0/0:22,0:22:63.22:0,63,1687	1/1:0,20:20:45.15:854,45,0	0/0:24,0:24:69.06:0,69,1655	0/0:20,0:20:60.21:0,60,1527	0/0:14,0:14:39.13:0,39,1052	0/0:28,0:28:81.28:0,81,2113	0/0:28,0:28:84.29:0,84,2206	0/0:26,0:26:78.25:0,78,1929	0/0:44,0:44:99:0,132,3479	0/0:33,0:33:96.33:0,96,2447	0/0:29,0:29:84.29:0,84,2223	0/0:7,0:7:21.07:0,21,566
chr10	38558165	.	T	TTA	2040.48	PASS	AB=0.675;AC=14;AF=0.259;AN=54;BaseQRankSum=-6.856;DP=261;FS=10.601;HRun=0;HaplotypeScore=37.9177;InbreedingCoeff=0.4271;MQ=76.43;MQ0=0;MQRankSum=-0.134;QD=24.29;ReadPosRankSum=1.301;VQSLOD=3.2084;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:3,0:16:31.21:0,31,153	1/1:1,0:1:3.01:46,3,0	0/0:7,0:7:1.62:0,2,32	./.	1/1:4,8:12:18.06:262,18,0	0/0:15,0:15:30.09:0,30,359	0/0:3,0:3:9.03:0,9,108	0/0:22,0:22:33.09:0,33,384	1/1:2,5:7:10.81:190,11,0	0/0:5,0:9:5.68:0,6,28	0/0:0,0:6:11.36:0,11,56	0/0:9,0:9:15.05:0,15,180	1/1:1,7:9:6.93:274,7,0	0/1:2,5:8:17.93:200,0,18	0/1:2,2:4:26.95:87,0,27	0/1:1,6:7:14.92:267,0,15	1/1:5,19:24:54.18:864,54,0	0/0:5,0:19:34.09:0,34,168	0/1:11,1:12:17.84:18,0,293	0/0:3,0:3:6.02:0,6,72	0/0:6,0:6:12.04:0,12,143	0/0:3,0:4:5.85:0,6,50	0/0:9,0:9:15.05:0,15,180	0/0:6,0:6:12.02:0,12,133	0/0:3,0:3:6.02:0,6,72	0/0:12,0:13:17.89:0,18,194	0/0:11,0:11:24.07:0,24,287	0/0:5,0:5:9.03:0,9,108
chr10	38558930	.	C	CTCTGTCTCTG	7722.75	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=7.215;DP=707;FS=0.375;HRun=0;HaplotypeScore=205.9901;InbreedingCoeff=0.9219;MQ=63.42;MQ0=5;MQRankSum=-2.989;QD=21.04;ReadPosRankSum=6.528;VQSLOD=3.6535;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,26:43:21.07:1070,21,0	1/1:7,0:7:5.65:28,6,0	0/0:33,0:16:17.65:0,18,322	0/0:41,0:18:6.63:0,7,207	1/1:17,0:17:17.25:150,17,0	0/0:29,0:29:81.23:0,81,1960	0/0:35,0:35:78.25:0,78,1938	0/0:22,0:22:39.12:0,39,884	1/1:29,0:29:63.23:438,63,0	1/1:3,18:23:48.14:1684,48,0	1/1:4,13:18:3.01:153,3,0	1/1:1,19:21:21.07:1068,21,0	1/1:23,0:23:40.44:343,40,0	1/1:34,0:34:61.72:338,62,0	1/1:27,0:26:42.46:348,42,0	1/1:22,0:22:34.66:289,35,0	1/1:33,0:33:56.88:286,57,0	1/1:10,9:22:12.34:612,12,0	0/0:28,0:27:59.52:0,60,1096	0/0:23,0:23:53.74:0,54,1311	0/0:24,0:24:63.19:0,63,1457	0/0:28,0:28:72.22:0,72,1910	1/1:2,12:19:6.02:305,6,0	1/1:4,20:28:12.04:609,12,0	0/0:18,0:18:48.15:0,48,1194	0/0:27,0:27:75.22:0,75,2032	0/0:20,0:19:51.15:0,51,1426	0/0:12,0:12:33.11:0,33,891
chr10	38558936	.	C	CTCTG	10869.81	PASS	AB=0.995;AC=23;AF=0.411;AN=56;BaseQRankSum=-5.616;DP=734;FS=0.736;HRun=0;HaplotypeScore=134.6905;InbreedingCoeff=0.4642;MQ=66.20;MQ0=6;MQRankSum=-6.638;QD=28.31;ReadPosRankSum=8.447;VQSLOD=4.4000;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:44,0:44:99:392,0,101	1/1:0,8:9:6.49:156,6,0	0/0:36,0:18:14.02:0,14,341	0/0:45,0:21:20.09:0,20,304	1/1:1,17:19:18.06:467,18,0	0/0:29,0:29:81.28:0,81,1420	0/0:30,0:30:84.27:0,84,1448	0/0:23,0:23:54.17:0,54,889	1/1:3,26:30:66.23:1713,66,0	0/1:24,0:25:99:576,0,131	0/1:16,0:16:79.02:82,0,79	0/1:21,0:21:39.78:373,0,40	1/1:3,21:25:42.56:1084,43,0	1/1:0,37:37:66:1713,66,0	1/1:3,25:27:45.15:1168,45,0	1/1:1,24:26:36.12:935,36,0	1/1:5,27:32:60.21:1559,60,0	0/1:23,0:23:58.40:300,0,58	0/0:28,0:27:69.19:0,69,1072	0/0:24,0:24:57.16:0,57,993	0/0:25,0:25:60.18:0,60,983	0/0:27,0:27:75.23:0,75,1277	0/1:21,0:21:74.66:132,0,75	0/1:28,0:27:47.29:220,0,47	0/0:19,0:19:54.14:0,54,887	0/0:28,0:28:81.22:0,81,1399	0/0:22,0:21:60.19:0,60,1020	0/0:12,0:12:33.11:0,33,585
chr10	38561216	.	TG	T	4867.15	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=11.491;DP=545;FS=1.116;HRun=9;HaplotypeScore=65.4070;InbreedingCoeff=0.9862;MQ=80.59;MQ0=0;MQRankSum=-7.298;QD=16.90;ReadPosRankSum=5.548;VQSLOD=5.0318;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:39:60.67:178,61,0	1/1:3,12:15:30.01:275,30,0	0/0:25,0:26:51.19:0,51,596	0/0:22,0:18:28.30:0,28,388	1/1:3,20:23:54.03:494,54,0	0/0:15,1:16:17.65:0,18,448	0/0:27,0:27:72.17:0,72,796	0/0:13,0:13:24.05:0,24,259	1/1:0,18:18:45.02:412,45,0	1/1:2,0:16:28.52:84,29,0	1/1:1,0:5:8.15:24,8,0	1/1:2,18:20:48.02:439,48,0	1/1:2,23:25:69.03:631,69,0	1/1:0,20:20:48.03:439,48,0	1/1:3,20:23:59.51:546,60,0	1/1:1,15:16:39.02:357,39,0	1/1:3,14:18:38.05:335,38,0	1/1:2,0:28:44.81:131,45,0	0/0:20,0:20:54.16:0,54,623	0/0:23,0:23:60.15:0,60,674	0/0:27,0:27:66.14:0,66,742	0/0:23,0:23:61.41:0,61,685	1/1:1,12:13:30.02:275,30,0	1/1:0,9:9:27.01:247,27,0	0/0:9,0:9:27.08:0,27,311	0/0:21,0:21:57.17:0,57,658	0/0:21,0:21:54.16:0,54,623	0/0:9,0:9:15.04:0,15,173
chr10	38562894	.	AAAAAAC	A	9406.60	PASS	AB=0.583;AC=29;AF=0.518;AN=56;BaseQRankSum=13.857;DP=655;FS=11.638;HRun=0;HaplotypeScore=143.6183;InbreedingCoeff=0.9236;MQ=68.06;MQ0=1;MQRankSum=-13.580;QD=27.11;ReadPosRankSum=2.621;VQSLOD=4.0852;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:12,17:29:30.01:535,30,0	1/1:4,5:9:15.05:309,15,0	0/0:30,0:26:21.07:0,21,611	0/0:18,0:17:21.06:0,21,536	1/1:6,11:17:15.01:267,15,0	0/0:17,0:17:45.14:0,45,1286	0/0:29,0:29:51.16:0,51,1525	0/0:40,0:40:69.14:0,69,2038	1/1:8,20:28:54.18:1090,54,0	1/1:14,17:31:54.09:870,54,0	1/1:9,10:19:26.95:430,27,0	1/1:9,13:22:36.12:742,36,0	1/1:9,11:20:24.08:495,24,0	1/1:12,16:28:36.08:700,36,0	1/1:11,13:24:36.12:743,36,0	1/1:16,17:33:45.15:928,45,0	0/1:4,10:14:11.73:468,0,12	1/1:6,7:13:15.05:309,15,0	0/0:20,0:20:39.13:0,39,1232	0/0:20,0:20:42.14:0,42,1328	0/0:20,0:20:42.14:0,42,1298	0/0:27,0:27:57.20:0,57,1812	1/1:6,16:22:32.35:637,32,0	1/1:12,26:38:43.08:882,43,0	0/0:27,0:27:63.19:0,63,1890	0/0:29,0:29:54.19:0,54,1740	0/0:24,0:24:39.13:0,39,1272	0/0:7,0:7:18.06:0,18,588
chr10	38563088	.	ACTCACT	A	3113.03	PASS	AB=0.994;AC=33;AF=0.611;AN=54;BaseQRankSum=4.386;DP=470;FS=42.714;HRun=0;HaplotypeScore=105.4252;InbreedingCoeff=0.2379;MQ=70.74;MQ0=20;MQRankSum=0.046;QD=9.40;ReadPosRankSum=5.604;VQSLOD=0.3082;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:9,0:9:1.68:71,2,0	1/1:3,0:4:12:177,12,0	0/1:40,0:22:2.40:2,0,304	0/0:53,0:22:37.86:0,38,361	1/1:2,21:23:8.85:56,9,0	0/0:14,0:14:30.46:0,30,338	0/0:10,0:10:11.75:0,12,203	0/0:28,0:27:77.33:0,77,695	1/1:9,0:9:17.89:180,18,0	0/1:35,0:34:99:532,0,332	1/1:11,0:11:26.91:218,27,0	1/1:0,0:6:6.02:125,6,0	1/1:1,0:10:5.68:77,6,0	1/1:11,0:10:8.10:140,8,0	1/1:5,0:17:3.01:70,3,0	./.	1/1:1,11:12:6.02:133,6,0	0/1:14,0:14:64.69:168,0,65	0/1:20,0:19:51.30:51,0,306	0/0:8,0:7:17.98:0,18,149	0/1:17,0:15:2.36:2,0,235	0/0:12,0:12:11.91:0,12,91	1/1:8,1:8:20.91:250,21,0	1/1:17,0:16:32.97:447,33,0	0/1:11,0:10:60.90:61,0,116	0/1:20,0:20:99:320,0,163	0/1:18,0:19:99:164,0,132	0/1:16,0:16:48.37:48,0,230
chr10	38563092	.	ACTCTCT	A	2187.18	PASS	AB=1.000;AC=35;AF=0.761;AN=46;BaseQRankSum=-0.662;DP=473;FS=21.383;HRun=0;HaplotypeScore=108.3209;InbreedingCoeff=0.3137;MQ=64.59;MQ0=27;MQRankSum=3.387;QD=8.32;ReadPosRankSum=3.871;VQSLOD=0.7587;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:13,0:12:4.99:5,0,29	1/1:4,0:4:6.01:88,6,0	./.	0/0:51,0:20:0.47:0,0,1	1/1:21,0:21:0.47:1,0,0	0/1:14,0:14:7.67:8,0,84	0/1:12,0:12:7.62:8,0,37	0/0:26,0:25:2.78:0,3,8	1/1:7,0:7:3.01:45,3,0	0/0:35,0:34:36.11:0,36,735	./.	1/1:6,0:6:6.02:92,6,0	1/1:9,0:9:2.61:44,3,0	1/1:11,0:9:5.09:69,5,0	1/1:18,0:17:3.01:45,3,0	./.	1/1:12,0:12:6.49:97,6,0	0/0:14,0:13:12.02:0,12,186	1/1:19,4:22:9.38:201,9,0	./.	1/1:14,0:15:3.01:60,3,0	./.	1/1:11,0:9:6.02:85,6,0	1/1:19,0:17:12.51:181,13,0	1/1:9,0:8:9.03:163,9,0	1/1:10,10:21:32.53:614,33,0	1/1:19,0:19:0.08:344,0,0	1/1:17,0:16:9.03:170,9,0
chr10	38563163	.	CACACACACACACACACAT	C	613.58	PASS	AB=0.901;AC=6;AF=0.107;AN=56;BaseQRankSum=3.806;DP=574;FS=7.675;HRun=0;HaplotypeScore=197.9297;InbreedingCoeff=0.2694;MQ=44.30;MQ0=65;MQRankSum=-1.078;QD=4.32;ReadPosRankSum=-1.975;VQSLOD=1.7404;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:31,0:26:0:0,0,0	0/0:10,0:10:18.06:0,18,1032	0/0:5,0:2:5.92:0,6,42	0/0:14,0:3:2.23:0,2,32	0/0:20,0:19:15.52:0,16,921	0/0:29,0:26:24.02:0,24,691	0/0:28,0:22:24.73:0,25,628	0/0:25,0:22:45.04:0,45,775	0/0:25,0:24:5.30:0,5,1134	1/1:18,12:25:18.98:390,19,0	0/0:6,11:16:2.96:0,3,19	0/0:11,0:9:15.04:0,15,494	0/0:16,0:14:3.12:0,3,1069	0/0:10,0:8:12.51:0,13,590	0/1:26,0:24:28.38:28,0,630	0/0:20,0:20:28.65:0,29,1393	0/1:26,0:24:27.88:28,0,1502	0/1:10,19:23:99:285,0,161	0/0:16,0:12:18.26:0,18,693	0/0:24,0:22:42.04:0,42,2430	0/0:21,0:12:5.99:0,6,50	0/0:18,0:18:21.07:0,21,1393	0/0:21,0:18:0.47:0,0,2	0/0:26,0:20:0:0,0,0	0/0:22,0:19:36.10:0,36,1988	0/0:23,0:20:44.07:0,44,1476	0/0:22,0:20:44.31:0,44,1866	0/0:9,0:8:24.08:0,24,1112
chr10	38563165	.	CACACACACACACACAT	C	624.23	PASS	AB=1.000;AC=7;AF=0.130;AN=54;BaseQRankSum=4.401;DP=569;FS=19.934;HRun=0;HaplotypeScore=184.1651;InbreedingCoeff=0.1350;MQ=44.54;MQ0=65;MQRankSum=0.012;QD=4.31;ReadPosRankSum=-3.293;VQSLOD=0.6397;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:10,0:10:18.06:0,18,894	0/0:5,0:2:5.92:0,6,42	0/0:16,0:4:5.30:0,5,54	0/0:17,0:16:15.52:0,16,803	0/0:29,0:26:24.02:0,24,601	0/0:27,0:21:24.03:0,24,528	0/0:26,0:23:47.89:0,48,615	0/1:24,0:23:20.59:21,0,934	1/1:28,0:23:20.12:351,20,0	0/0:17,0:16:2.97:0,3,20	0/0:11,0:9:15.04:0,15,367	0/0:16,0:14:3.12:0,3,882	0/1:12,0:10:35.86:36,0,472	0/1:25,0:23:28.41:28,0,507	0/0:20,0:20:5.21:0,5,1148	0/1:27,0:25:73.72:74,0,1266	0/1:29,0:23:99:244,0,156	0/0:17,0:13:20.73:0,21,639	0/0:24,0:22:41.93:0,42,2129	0/0:20,0:11:5.99:0,6,50	0/0:17,0:17:21.06:0,21,1225	0/0:19,0:16:0.47:0,0,2	0/0:26,0:20:0:0,0,0	0/0:21,0:18:29.22:0,29,1733	0/0:24,0:21:43.70:0,44,1272	0/0:21,0:19:39.76:0,40,1646	0/0:10,0:9:27.08:0,27,951
chr10	38563175	.	CACACAT	C	1048.23	PASS	AB=1.000;AC=13;AF=0.241;AN=54;BaseQRankSum=3.459;DP=554;FS=14.896;HRun=0;HaplotypeScore=121.0392;InbreedingCoeff=0.0833;MQ=46.10;MQ0=54;MQRankSum=0.309;QD=4.66;ReadPosRankSum=-4.242;VQSLOD=-0.7274;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:22:0:0,0,0	0/0:11,0:11:14.96:0,15,184	0/0:13,0:5:8.09:0,8,84	0/1:20,0:7:6.33:6,0,43	0/1:19,0:18:48.84:49,0,173	0/0:25,0:22:12.41:0,12,276	0/0:24,0:20:29.55:0,30,239	0/0:26,0:24:18.76:0,19,368	0/1:25,0:24:91.09:91,0,157	1/1:24,0:20:20.30:209,20,0	0/0:16,0:15:2.97:0,3,20	1/1:11,0:9:20.38:227,20,0	0/1:14,0:12:60:60,0,158	0/1:11,0:10:13.20:76,0,13	0/1:24,0:22:37.49:152,0,37	0/1:21,0:21:87.71:88,0,184	0/1:29,0:27:99:162,0,194	0/1:27,0:22:51.61:84,0,52	0/0:13,0:9:20.08:0,20,206	0/0:23,0:23:30.42:0,30,814	0/0:21,0:13:17.97:0,18,147	0/0:15,0:15:24.01:0,24,524	0/0:19,0:17:0.76:0,1,2	./.	0/0:23,0:20:45.06:0,45,752	0/0:21,0:18:39.09:0,39,517	0/0:19,0:17:35.77:0,36,616	0/0:10,0:9:25.79:0,26,274
chr10	38563177	.	CACAT	C	1310.71	PASS	AB=1.000;AC=16;AF=0.296;AN=54;BaseQRankSum=6.000;DP=554;FS=6.743;HRun=0;HaplotypeScore=108.2617;InbreedingCoeff=0.1987;MQ=46.61;MQ0=53;MQRankSum=-1.375;QD=5.63;ReadPosRankSum=-1.401;VQSLOD=1.4952;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:22:0:0,0,0	0/1:12,0:12:39.40:39,0,67	0/0:13,0:5:8.09:0,8,84	0/1:20,0:7:6.31:6,0,43	0/1:20,0:19:53.33:71,0,53	0/0:19,6:22:12.26:0,12,251	0/0:24,0:20:30.56:0,31,249	0/0:26,0:24:21.61:0,22,392	0/1:22,0:21:49.61:153,0,50	1/1:24,0:20:20.25:177,20,0	0/0:16,0:15:2.97:0,3,20	1/1:11,0:9:20.97:258,21,0	0/1:14,0:12:50.42:76,0,50	1/1:11,0:10:18.07:135,18,0	1/1:24,0:22:6.44:162,6,0	0/1:20,0:20:39.75:121,0,40	0/1:28,0:26:42.55:220,0,43	0/1:27,0:22:33.56:57,0,34	0/0:13,0:9:1.21:0,1,135	0/0:23,0:23:23.90:0,24,610	0/0:21,0:14:17.97:0,18,147	0/0:15,0:15:24.01:0,24,404	0/0:1,18:17:0.47:0,0,2	./.	0/0:25,0:22:50.89:0,51,609	0/0:22,0:19:42.09:0,42,469	0/0:19,0:17:33.04:0,33,444	0/0:11,0:10:13.42:0,13,190
chr10	38564575	.	GCA	G	2593.28	PASS	AB=0.899;AC=20;AF=0.357;AN=56;BaseQRankSum=10.149;DP=895;FS=5.091;HRun=0;HaplotypeScore=123.7512;InbreedingCoeff=-0.0793;MQ=62.32;MQ0=9;MQRankSum=5.311;QD=4.37;ReadPosRankSum=3.664;VQSLOD=2.4409;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:35,2:38:80.36:80,0,705	0/1:10,1:11:5.44:5,0,382	0/0:27,0:17:5.99:0,6,69	0/0:39,0:24:11.87:0,12,93	0/1:18,4:24:60.64:61,0,656	0/0:18,2:20:15.66:0,16,691	0/1:53,2:59:29.20:29,0,1602	0/0:32,0:31:4.83:0,5,467	0/0:29,2:31:36.76:0,37,983	0/0:28,0:31:14.14:0,14,842	0/0:17,0:16:25.01:0,25,534	1/1:10,19:30:53.50:574,53,0	0/0:20,1:21:5.47:0,5,567	0/0:38,3:41:50.33:0,50,1217	0/0:24,1:26:33.66:0,34,960	0/1:27,1:28:10.47:10,0,769	0/1:43,5:47:30.67:31,0,1241	0/1:37,4:41:41.18:41,0,1222	0/1:17,0:15:2.26:2,0,357	0/1:18,4:22:61.49:61,0,501	0/1:77,11:88:2.72:3,0,2230	0/1:21,4:25:99:117,0,587	1/1:4,19:24:50.99:582,51,0	1/1:11,50:60:78.23:922,78,0	0/1:16,6:22:88.17:88,0,573	0/1:27,4:32:83.82:84,0,806	0/1:21,2:22:72.06:72,0,313	0/0:15,1:16:12.64:0,13,673
chr10	38564963	.	G	GAC	7136.38	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=14.683;DP=687;FS=5.998;HRun=0;HaplotypeScore=112.6797;InbreedingCoeff=0.9742;MQ=65.04;MQ0=0;MQRankSum=-1.771;QD=18.78;ReadPosRankSum=5.529;VQSLOD=4.8407;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:41,0:40:87.27:1071,87,0	1/1:8,0:8:9.70:142,10,0	0/0:25,0:25:22.46:0,22,492	0/0:16,0:16:12.57:0,13,412	1/1:32,1:33:59.26:774,59,0	0/0:17,0:17:51.17:0,51,663	0/0:16,0:16:36.09:0,36,451	0/0:46,0:46:99:0,108,1360	1/1:27,1:28:45.14:549,45,0	1/1:29,0:29:65.96:828,66,0	1/1:23,0:22:10.41:297,10,0	1/1:30,0:30:39.12:475,39,0	1/1:19,0:19:23.96:278,24,0	1/1:21,0:21:18.75:251,19,0	1/1:21,1:22:36.11:435,36,0	1/1:33,0:33:41.99:512,42,0	1/1:28,0:28:48.15:590,48,0	1/1:29,0:29:33.80:446,34,0	0/0:14,0:14:39.11:0,39,493	0/0:22,0:22:66.19:0,66,826	0/0:17,0:17:39.09:0,39,476	0/0:17,0:17:45.15:0,45,585	1/1:19,0:19:11.45:274,11,0	1/1:16,1:16:14.32:213,14,0	0/0:28,0:28:81.25:0,81,1039	0/0:39,0:39:99:0,105,1342	0/0:32,0:32:81.23:0,81,1024	0/0:18,0:18:42.14:0,42,546
chr10	38564972	.	A	ACAAAT	19287.16	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-12.483;DP=671;FS=2.341;HRun=0;HaplotypeScore=100.9028;InbreedingCoeff=0.9947;MQ=63.88;MQ0=0;MQRankSum=-2.088;QD=51.43;ReadPosRankSum=4.738;VQSLOD=5.0794;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,35:39:85.17:2761,85,0	1/1:0,7:7:12.04:398,12,0	0/0:25,0:25:39.09:0,39,1080	0/0:16,0:16:24.22:0,24,640	1/1:4,26:37:84:1845,84,0	0/0:18,0:18:54.17:0,54,1202	0/0:15,0:15:42.12:0,42,814	0/0:42,0:42:99:0,123,2452	1/1:1,24:27:45.15:1483,45,0	1/1:1,25:31:77.95:1930,78,0	1/1:0,20:20:45.15:1005,45,0	1/1:0,24:25:39.13:1297,39,0	1/1:0,15:19:24:781,24,0	1/1:0,21:22:24.08:728,24,0	1/1:1,21:24:36.08:1191,36,0	1/1:0,28:30:42.14:1397,42,0	1/1:0,34:35:48.16:1570,48,0	1/1:1,22:24:42.14:1269,42,0	0/0:15,0:14:42.14:0,42,939	0/0:24,0:24:72.21:0,72,1389	0/0:13,0:13:39.10:0,39,777	0/0:15,0:15:45.15:0,45,978	1/1:0,16:19:33.10:910,33,0	1/1:2,13:14:27.09:721,27,0	0/0:28,0:28:84.28:0,84,1876	0/0:37,0:37:99:0,105,2208	0/0:29,0:28:84.29:0,84,1823	0/0:19,0:19:56.22:0,56,1153
chr10	38565640	.	G	GT	6177.75	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=15.508;DP=663;FS=1.099;HRun=1;HaplotypeScore=133.0001;InbreedingCoeff=0.9960;MQ=77.49;MQ0=0;MQRankSum=-16.685;QD=37.67;ReadPosRankSum=-2.342;VQSLOD=4.0123;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:99:0,99,1264	1/1:0,5:5:15.05:219,15,0	0/0:8,0:8:20.37:0,20,194	0/0:31,0:31:62.16:0,62,721	1/1:1,23:24:38.46:377,38,0	0/0:15,0:15:42.14:0,42,542	0/0:37,0:37:99:0,102,1308	0/0:24,0:24:66.17:0,66,816	1/1:3,21:25:72.19:1019,72,0	0/0:36,0:36:99:0,102,1308	0/0:13,0:13:38.96:0,39,481	0/0:24,0:24:72.20:0,72,903	1/1:1,26:27:78.20:1129,78,0	1/1:2,16:18:51.17:750,51,0	1/1:1,24:25:72.16:1046,72,0	1/1:0,19:19:57.19:851,57,0	1/1:5,16:21:54.17:786,54,0	0/0:31,0:31:93.27:0,93,1188	0/0:11,0:11:27.08:0,27,338	0/0:20,0:20:57.17:0,57,725	0/0:60,0:60:99:0,178,2278	0/0:25,0:25:74.99:0,75,912	0/0:19,0:19:57.19:0,57,739	0/0:30,0:30:87.22:0,87,1078	0/0:28,0:28:81.24:0,81,1023	0/0:27,0:27:80.29:0,80,1018	0/0:19,0:19:57.17:0,57,724	0/0:8,0:8:24.05:0,24,293
chr10	38565652	.	ACT	A	6239.84	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=15.787;DP=644;FS=0.000;HRun=0;HaplotypeScore=143.1643;InbreedingCoeff=0.9968;MQ=73.82;MQ0=0;MQRankSum=-16.612;QD=40.78;ReadPosRankSum=0.934;VQSLOD=6.0375;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,102,1955	1/1:0,5:5:15.05:243,15,0	0/0:9,0:9:27.09:0,27,544	0/0:24,0:24:50.90:0,51,1010	1/1:0,24:24:27.56:439,28,0	0/0:15,0:15:45.15:0,45,914	0/0:37,0:37:99:0,111,2188	0/0:19,0:19:57.20:0,57,1157	1/1:2,23:25:75.22:1123,75,0	0/0:35,0:35:99:0,105,2059	0/0:11,0:11:33.11:0,33,669	0/0:22,0:22:66.21:0,66,1283	1/1:1,25:26:75.24:1195,75,0	1/1:0,15:15:45.15:731,45,0	1/1:1,22:23:69.23:1105,69,0	1/1:1,20:21:57.19:915,57,0	1/1:0,14:14:30.13:488,30,0	0/0:32,0:32:96.33:0,96,1912	0/0:16,0:16:48.13:0,48,935	0/0:18,0:18:54.17:0,54,1001	0/0:60,0:60:99:0,178,3570	0/0:27,0:27:81.27:0,81,1594	0/0:20,0:20:57.20:0,57,1148	0/0:30,0:30:90.29:0,90,1792	0/0:26,0:26:78.25:0,78,1513	0/0:27,0:27:81.28:0,81,1642	0/0:18,0:18:54.19:0,54,1090	0/0:11,0:11:33.11:0,33,666
chr10	38565735	.	AAC	A	6668.32	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=13.495;DP=646;FS=5.999;HRun=0;HaplotypeScore=128.7078;InbreedingCoeff=0.9991;MQ=92.03;MQ0=2;MQRankSum=-4.044;QD=38.32;ReadPosRankSum=3.900;VQSLOD=6.9386;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,102,1900	1/1:1,9:10:24.04:337,24,0	0/0:26,0:26:75.24:0,75,1379	0/0:30,0:30:84.15:0,84,1379	1/1:0,12:12:33.08:474,33,0	0/0:17,0:17:51.16:0,51,934	0/0:33,0:33:99:0,99,1658	0/0:30,0:30:90.14:0,90,1558	1/1:7,26:32:75.25:1124,75,0	0/0:20,0:20:54.17:0,54,946	0/0:9,0:9:27.09:0,27,505	0/0:28,0:28:84.27:0,84,1559	1/1:2,22:24:63.21:951,63,0	1/1:1,23:24:63.21:952,63,0	1/1:1,24:25:69.23:1043,69,0	1/1:0,16:16:42:608,42,0	1/1:0,30:29:78.26:1178,78,0	0/0:22,0:22:66.20:0,66,1186	0/0:24,0:24:63.19:0,63,1129	0/0:16,0:16:48.15:0,48,878	0/0:47,0:47:99:0,141,2619	0/0:18,0:18:54.19:0,54,1024	0/0:8,0:8:24.08:0,24,448	0/0:41,0:41:99:0,123,2227	0/0:13,0:13:39.12:0,39,708	0/0:17,0:17:42.14:0,42,786	0/0:22,0:22:66.17:0,66,1152	0/0:15,0:15:45.14:0,45,822
chr10	38566007	.	GA	G	541.82	PASS	AB=0.959;AC=18;AF=0.321;AN=56;BaseQRankSum=6.724;DP=422;FS=4.822;HRun=2;HaplotypeScore=58.6273;InbreedingCoeff=0.5280;MQ=67.32;MQ0=2;MQRankSum=-2.741;QD=5.02;ReadPosRankSum=-3.498;VQSLOD=-0.6263;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:23,1:25:13.22:20,0,13	0/0:1,1:2:0.89:0,1,2	0/0:21,1:18:42.11:0,42,567	0/0:24,0:22:36.50:0,36,705	0/1:13,0:13:5.12:92,0,5	0/0:12,0:12:36.11:0,36,517	0/0:25,0:25:72.23:0,72,1057	0/0:29,0:29:84.27:0,84,1222	1/1:10,0:10:0.50:38,1,0	1/1:7,1:8:10.13:150,10,0	0/1:5,0:5:0.29:1,0,0	1/1:9,4:13:10.92:180,11,0	0/0:5,0:5:3.53:0,4,9	0/1:6,1:7:2.64:26,0,3	0/0:5,0:5:2.96:0,3,7	1/1:8,0:8:3.58:60,4,0	1/1:7,0:7:6.02:65,6,0	0/0:7,0:7:1.25:0,1,3	0/0:30,0:29:87.22:0,87,1190	0/0:20,0:20:60.18:0,60,858	0/0:28,0:28:84.26:0,84,1217	0/0:31,0:31:93.30:0,93,1353	1/1:4,1:5:1.77:36,2,0	1/1:7,0:7:0.83:31,1,0	0/0:24,0:24:72.24:0,72,1072	0/0:22,0:22:66.22:0,66,986	0/0:21,0:21:63.20:0,63,918	0/0:7,0:7:21.07:0,21,314
chr10	38566008	.	A	AGGG	4008.59	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=10.412;DP=438;FS=17.979;HRun=3;HaplotypeScore=69.7928;InbreedingCoeff=0.8633;MQ=67.31;MQ0=2;MQRankSum=-2.169;QD=29.69;ReadPosRankSum=1.968;VQSLOD=0.2630;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,19:25:26.85:611,27,0	1/1:2,0:2:3:25,3,0	0/0:22,0:18:42.08:0,42,607	0/0:24,0:23:28.53:0,29,801	1/1:0,13:15:20.61:314,21,0	0/0:12,0:12:36.09:0,36,581	0/0:25,0:25:74.82:0,75,1258	0/0:30,0:30:84.25:0,84,1365	1/1:2,9:11:21.07:481,21,0	1/1:1,8:9:25.31:379,25,0	1/1:0,5:5:3.01:70,3,0	1/1:6,7:13:39.05:684,39,0	1/1:0,4:4:9.03:207,9,0	1/1:2,6:9:15.05:280,15,0	1/1:1,3:4:9.03:209,9,0	1/1:1,7:10:15.05:346,15,0	1/1:0,7:7:6.02:133,6,0	1/1:0,7:7:3.01:70,3,0	0/0:32,0:31:87.20:0,87,1350	0/0:20,0:20:60.18:0,60,1022	0/0:31,0:31:84.26:0,84,1444	0/0:32,0:32:93.30:0,93,1632	1/1:2,3:6:6.01:95,6,0	1/1:1,6:8:6.02:104,6,0	0/0:24,0:24:72.24:0,72,1295	0/0:22,0:22:66.22:0,66,1177	0/0:21,0:21:63.20:0,63,1123	0/0:7,0:7:21.07:0,21,391
chr10	38567677	.	AACACACACACACACACACACACACACACAC	A	946.61	PASS	AC=4;AF=0.074;AN=54;BaseQRankSum=2.762;DP=441;FS=2.293;HRun=0;HaplotypeScore=264.1483;InbreedingCoeff=0.5365;MQ=73.28;MQ0=15;MQRankSum=-2.094;QD=24.91;ReadPosRankSum=1.281;VQSLOD=1.8771;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:26:36.12:0,36,2829	0/0:2,0:5:6.02:0,6,222	0/0:34,0:26:6.02:0,6,177	0/0:34,0:28:23.82:0,24,640	0/0:11,0:12:6.02:0,6,268	0/0:16,0:16:15.05:0,15,1358	0/0:20,0:19:21.07:0,21,1357	0/0:13,0:12:12.04:0,12,318	0/0:9,0:9:12.03:0,12,416	0/0:16,0:15:26.83:0,27,1998	0/0:10,0:10:18.06:0,18,1560	1/1:6,9:16:15.05:1025,15,0	0/0:6,0:5:6.02:0,6,334	0/0:4,0:8:3.01:0,3,53	0/0:9,0:9:12.04:0,12,562	0/0:9,0:12:6.02:0,6,220	0/0:11,0:13:8.04:0,8,191	0/0:15,0:14:27.07:0,27,2004	0/0:15,0:15:24.55:0,25,1453	0/0:9,0:9:12.04:0,12,1522	0/0:19,0:17:18.01:0,18,842	0/0:20,0:20:15.05:0,15,1514	1/1:18,0:21:2.99:24,3,0	./.	0/0:18,0:17:34.67:0,35,3547	0/0:8,0:7:9.02:0,9,425	0/0:14,0:14:15.52:0,16,1064	0/0:12,0:13:24.06:0,24,1901
chr10	38567733	.	CAGAGAGAGAG	C	355.77	PASS	AB=0.965;AC=12;AF=0.240;AN=50;BaseQRankSum=2.126;DP=521;FS=46.563;HRun=0;HaplotypeScore=126.8575;InbreedingCoeff=0.1484;MQ=38.12;MQ0=69;MQRankSum=3.888;QD=1.60;ReadPosRankSum=0.767;VQSLOD=0.5650;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:26:10.73:46,11,0	0/0:12,0:10:2.70:0,3,7	./.	./.	0/0:28,0:24:6.02:0,6,243	./.	0/1:19,7:22:0.10:0,0,0	0/0:10,0:9:6.02:0,6,108	0/0:16,0:15:6.42:0,6,145	0/1:29,0:24:73.98:74,0,225	1/1:10,0:11:0.88:2,1,0	0/0:23,0:22:6.49:0,6,248	0/0:10,0:7:9.50:0,10,234	0/0:21,0:21:3.01:0,3,89	0/0:15,0:14:6.02:0,6,246	0/0:15,0:14:12.04:0,12,499	0/0:18,0:12:5.61:0,6,126	0/1:24,0:20:99:219,0,102	0/0:14,0:10:6.02:0,6,229	0/1:18,0:18:1.60:2,0,153	1/1:38,0:27:6.78:110,7,0	0/0:19,0:18:3.01:0,3,125	0/0:13,0:11:3.01:0,3,122	0/0:28,0:26:17.78:0,18,742	0/0:19,0:17:6.02:0,6,158	0/1:27,0:25:6.54:7,0,619	0/0:20,0:18:13.91:0,14,228	0/1:18,0:14:22.50:22,0,394
chr10	38568431	.	GACAGACAC	G	1232.61	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=6.324;DP=703;FS=8.227;HRun=0;HaplotypeScore=202.2188;InbreedingCoeff=0.7813;MQ=49.75;MQ0=22;MQRankSum=-7.445;QD=11.21;ReadPosRankSum=0.729;VQSLOD=1.4344;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:29.35:0,29,482	0/1:12,0:12:7.12:7,0,65	0/0:25,0:12:8.10:0,8,98	0/0:11,0:5:14.93:0,15,128	0/0:34,0:31:16.31:0,16,137	0/0:26,0:26:37.14:0,37,1401	0/0:24,0:22:39.05:0,39,845	0/0:32,0:31:74.64:0,75,681	0/0:24,0:23:44.99:0,45,450	0/0:23,0:22:62.99:0,63,1269	0/0:16,0:16:24:0,24,419	1/1:1,26:27:38.75:1021,39,0	0/0:30,0:29:37.02:0,37,376	0/0:25,0:22:19.43:0,19,366	0/0:36,0:33:32.47:0,32,354	0/0:26,0:25:39.10:0,39,317	0/0:30,0:28:51.13:0,51,539	0/0:19,0:19:35.19:0,35,517	0/0:15,0:14:30.05:0,30,717	0/0:29,0:25:57.11:0,57,1428	0/0:40,0:38:75.11:0,75,1812	0/0:26,0:25:51.12:0,51,1578	1/1:2,33:34:17.68:268,18,0	1/1:3,32:36:6.02:75,6,0	0/0:17,0:16:33.05:0,33,790	0/0:26,0:22:64.23:0,64,1376	0/0:26,0:26:60.98:0,61,1221	0/0:5,0:4:12.04:0,12,429
chr10	38568433	.	CAG	C	428.61	PASS	AB=0.980;AC=19;AF=0.339;AN=56;BaseQRankSum=6.480;DP=709;FS=12.801;HRun=0;HaplotypeScore=157.8859;InbreedingCoeff=-0.2075;MQ=49.77;MQ0=23;MQRankSum=-4.011;QD=0.99;ReadPosRankSum=-4.682;VQSLOD=0.3122;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:26.95:0,27,233	1/1:12,0:12:5.06:26,5,0	0/0:23,0:9:8.12:0,8,108	0/0:13,0:6:17.07:0,17,139	0/1:34,0:31:26.05:26,0,39	0/0:26,0:26:44.63:0,45,522	0/1:24,1:23:3.26:3,0,259	0/1:27,5:31:96.09:96,0,320	0/1:25,0:24:15.87:16,0,157	0/1:24,0:23:54.13:54,0,352	0/1:17,0:17:25.39:25,0,138	1/1:27,0:27:4.85:216,5,0	0/1:29,0:28:8.92:9,0,184	0/1:26,0:23:6.56:7,0,155	0/1:34,0:31:29.34:29,0,142	0/1:26,0:25:20.38:20,0,106	0/0:30,0:28:17.03:0,17,205	0/1:19,0:19:7.12:7,0,147	0/1:15,1:15:13.04:13,0,242	0/0:29,1:26:5.32:0,5,400	0/0:39,1:37:70.98:0,71,711	0/0:27,0:26:50.97:0,51,467	0/1:35,0:34:3.06:3,0,109	0/0:36,0:36:5.99:0,6,50	0/0:17,0:16:32.99:0,33,343	0/1:25,2:23:28.53:29,0,443	0/1:26,0:26:0.75:1,0,413	0/0:5,0:4:7.75:0,8,56
chr10	38568435	.	G	GAC	3835.67	PASS	AB=0.746;AC=38;AF=0.679;AN=56;BaseQRankSum=-4.473;DP=723;FS=0.000;HRun=0;HaplotypeScore=155.9224;InbreedingCoeff=0.2419;MQ=49.75;MQ0=23;MQRankSum=2.219;QD=6.45;ReadPosRankSum=0.475;VQSLOD=3.0982;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:18,0:35:0:0,0,1	1/1:12,0:12:4.29:20,4,0	0/0:19,0:6:3.01:0,3,33	0/0:13,0:6:11.07:0,11,87	1/1:34,0:31:8.34:52,8,0	0/1:13,12:25:99:241,0,149	1/1:12,16:27:20.99:290,21,0	1/1:33,0:32:13.58:157,14,0	1/1:26,0:25:3.58:68,4,0	1/1:25,0:24:11.12:202,11,0	0/1:17,0:17:7.02:40,0,7	0/0:26,0:26:37.03:0,37,206	1/1:29,0:28:9.30:61,9,0	1/1:26,0:23:7.49:33,7,0	1/1:34,0:31:10.52:60,11,0	1/1:26,0:25:11.15:53,11,0	1/1:30,0:28:9.72:58,10,0	1/1:19,0:19:10.33:98,10,0	0/1:13,5:17:30.15:257,0,30	1/1:10,20:27:1.95:459,2,0	0/1:21,20:38:72.47:294,0,72	1/1:8,18:25:4.95:520,5,0	0/0:35,0:33:17.67:0,18,183	0/0:35,0:35:8.39:0,8,76	0/1:10,8:18:65.46:77,0,65	0/1:20,8:25:99:255,0,142	0/1:16,10:26:4.13:355,0,4	1/1:0,5:4:12.04:185,12,0
chr10	38568461	.	C	CAA	4633.82	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=13.391;DP=739;FS=6.063;HRun=1;HaplotypeScore=163.2186;InbreedingCoeff=0.2058;MQ=56.53;MQ0=16;MQRankSum=-2.801;QD=8.74;ReadPosRankSum=2.725;VQSLOD=1.7472;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:24.41:0,24,215	1/1:10,0:10:20.83:164,21,0	0/0:27,0:15:41.20:0,41,399	0/0:21,0:15:38.11:0,38,434	1/1:38,1:36:59.32:520,59,0	0/1:25,0:25:86.30:86,0,327	0/1:32,0:30:85:85,0,154	0/0:31,0:30:13.87:0,14,481	1/1:23,1:24:46.30:451,46,0	0/0:32,0:30:23.92:0,24,480	0/0:18,0:18:23.51:0,24,204	1/1:22,0:22:19.52:133,20,0	1/1:23,0:23:41.86:372,42,0	1/1:27,1:27:30.37:382,30,0	1/1:33,0:33:40.07:463,40,0	1/1:22,1:22:47.83:417,48,0	1/1:25,0:24:46.75:402,47,0	0/0:23,0:23:22.07:0,22,313	0/1:20,0:18:44.53:45,0,264	0/1:34,0:30:99:166,0,244	0/1:38,0:35:90.91:91,0,321	0/1:29,0:28:99:200,0,157	0/1:36,0:34:23.40:231,0,23	0/1:34,0:34:1.92:164,0,2	0/0:23,0:22:0.52:0,1,314	0/1:29,0:25:50.38:50,0,395	0/1:20,0:20:99:139,0,121	0/1:6,0:5:10.04:72,0,10
chr10	38568463	.	C	CAAAG	8647.54	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=9.277;DP=739;FS=1.916;HRun=0;HaplotypeScore=212.9685;InbreedingCoeff=0.9202;MQ=58.09;MQ0=16;MQRankSum=-9.015;QD=26.05;ReadPosRankSum=-1.638;VQSLOD=4.4901;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:16.40:0,16,373	1/1:8,2:10:26.84:381,27,0	0/0:28,0:16:45.01:0,45,713	0/0:22,0:16:35.65:0,36,768	1/1:34,5:36:72.07:1131,72,0	0/0:24,0:24:53.65:0,54,702	0/0:31,0:29:50.93:0,51,592	0/0:32,0:31:66.83:0,67,992	1/1:23,2:25:59.91:994,60,0	0/1:33,0:31:28.32:28,0,711	0/0:16,0:16:28.66:0,29,360	1/1:23,0:23:45.80:318,46,0	1/1:23,1:24:62.46:875,62,0	1/1:29,0:29:58.73:966,59,0	1/1:29,3:32:61.86:929,62,0	1/1:21,2:22:59.93:950,60,0	1/1:23,1:23:65.27:998,65,0	0/0:24,0:24:15.62:0,16,536	0/0:24,0:22:59.38:0,59,778	0/0:34,0:30:68.70:0,69,815	0/0:37,0:34:56.94:0,57,745	0/0:26,0:25:59.55:0,60,643	1/1:36,0:34:53.42:651,53,0	1/1:33,0:33:33.30:427,33,0	0/0:22,0:21:42.06:0,42,594	0/0:28,0:24:59.99:0,60,837	0/0:19,0:20:44.37:0,44,465	0/0:6,0:5:14.91:0,15,134
chr10	38569528	.	ACTG	A	6839.82	PASS	AB=0.967;AC=23;AF=0.411;AN=56;BaseQRankSum=11.857;DP=682;FS=0.000;HRun=0;HaplotypeScore=97.0416;InbreedingCoeff=0.8911;MQ=66.07;MQ0=0;MQRankSum=-1.840;QD=22.95;ReadPosRankSum=7.641;VQSLOD=3.7669;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:42.14:0,42,850	1/1:4,12:16:29.83:410,30,0	0/0:38,0:35:45.07:0,45,772	0/0:41,0:40:47.70:0,48,1002	1/1:9,8:17:18.06:240,18,0	0/0:17,0:17:27.02:0,27,387	0/0:34,0:34:69.22:0,69,1336	0/1:28,1:29:6.59:7,0,538	1/1:6,16:22:45.15:641,45,0	0/0:28,0:28:30.09:0,30,544	0/0:10,0:10:6.02:0,6,110	1/1:8,27:35:63.21:897,63,0	1/1:9,17:26:42.14:598,42,0	1/1:7,22:29:54.18:769,54,0	1/1:9,17:26:60.15:798,60,0	1/1:4,18:22:45.13:641,45,0	1/1:7,24:31:62.95:897,63,0	0/0:16,0:16:30.09:0,30,571	0/0:12,0:12:18.51:0,19,295	0/0:17,0:17:12.01:0,12,160	0/0:38,0:38:51.09:0,51,905	0/0:17,0:17:9.03:0,9,167	1/1:9,2:11:5.58:85,6,0	1/1:7,27:34:60.20:855,60,0	0/0:15,0:15:18.04:0,18,314	0/0:25,0:25:18.05:0,18,320	0/0:34,1:35:41.50:0,42,1408	0/0:12,0:12:24.08:0,24,467
chr10	38570429	.	G	GCA	8782.65	PASS	AB=0.638;AC=33;AF=0.589;AN=56;BaseQRankSum=-2.983;DP=694;FS=14.765;HRun=0;HaplotypeScore=155.1948;InbreedingCoeff=0.4286;MQ=58.57;MQ0=4;MQRankSum=-1.191;QD=17.29;ReadPosRankSum=0.025;VQSLOD=4.3248;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:52:90.90:0,91,447	1/1:5,0:9:11.99:103,12,0	0/0:16,0:10:15.02:0,15,165	0/0:9,0:3:3.01:0,3,34	1/1:11,0:17:17.97:174,18,0	1/1:5,20:26:45.14:684,45,0	0/1:21,18:40:46.97:520,0,47	1/1:13,12:26:17.33:564,17,0	1/1:13,0:29:41.59:351,42,0	0/0:4,0:26:56.82:0,57,280	0/0:1,0:17:39.77:0,40,196	0/1:6,18:24:57.36:565,0,57	1/1:11,0:26:40.49:321,40,0	1/1:12,0:25:38.17:290,38,0	1/1:5,1:20:26.48:207,26,0	1/1:8,1:21:29.28:220,29,0	1/1:13,1:22:23.71:189,24,0	0/0:6,0:18:31.25:0,31,154	0/1:14,11:25:20.66:446,0,21	1/1:6,14:20:36.12:554,36,0	0/1:23,24:50:32.82:876,0,33	0/0:24,0:24:51.12:0,51,598	0/1:11,18:30:80.47:694,0,80	0/1:14,25:40:73.59:647,0,74	0/0:19,0:24:48.41:0,48,480	1/1:11,13:24:27.23:620,27,0	1/1:6,13:20:3.95:510,4,0	0/1:5,6:11:46.25:246,0,46
chr10	38573847	.	T	TCC	1337.36	PASS	AB=0.944;AC=16;AF=0.286;AN=56;BaseQRankSum=3.483;DP=437;FS=24.432;HRun=8;HaplotypeScore=74.3093;InbreedingCoeff=0.7908;MQ=84.16;MQ0=1;MQRankSum=-2.530;QD=15.03;ReadPosRankSum=2.941;VQSLOD=0.1916;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:55:0,55,608	1/1:3,4:7:12.04:190,12,0	0/0:28,0:27:36.51:0,37,343	0/0:24,0:22:41.61:0,42,427	1/1:4,4:8:2.75:47,3,0	0/0:18,0:18:54.14:0,54,598	0/0:21,0:21:45.10:0,45,501	0/0:34,0:34:18.11:0,18,348	1/1:4,4:10:19.25:214,19,0	0/0:10,0:10:8.12:0,8,241	0/0:9,0:9:8.34:0,8,72	0/0:19,0:19:29.94:0,30,270	1/1:7,2:9:15.05:235,15,0	0/1:7,1:8:7.10:64,0,7	1/1:3,5:8:11.34:232,11,0	1/1:2,5:9:21.29:258,21,0	1/1:3,12:15:18.06:283,18,0	0/1:15,0:15:0.39:0,0,191	0/0:14,0:14:23.79:0,24,245	0/0:8,0:8:7.56:0,8,69	0/0:43,0:43:74.83:0,75,809	0/0:10,0:10:27.07:0,27,299	0/0:9,0:9:26.88:0,27,253	0/0:28,0:28:38.97:0,39,471	0/0:10,0:10:27.01:0,27,286	0/0:8,0:8:24.04:0,24,254	0/0:17,0:17:36.09:0,36,395	0/0:11,0:11:18.03:0,18,200
chr10	38573885	.	CTCTCCCTCTCCT	C	1650.14	PASS	AB=0.692;AC=19;AF=0.352;AN=54;BaseQRankSum=4.022;DP=453;FS=22.762;HRun=0;HaplotypeScore=157.1966;InbreedingCoeff=0.7775;MQ=69.18;MQ0=9;MQRankSum=-5.072;QD=16.84;ReadPosRankSum=-0.144;VQSLOD=1.0976;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:57.17:0,57,2030	1/1:7,0:7:9:159,9,0	0/0:42,0:23:2.64:0,3,61	0/0:46,0:23:3.01:0,3,42	0/0:5,2:7:0.89:0,1,2	0/0:27,0:27:51.13:0,51,1938	0/0:19,0:19:21.07:0,21,600	./.	1/1:13,0:12:6.02:160,6,0	0/0:19,0:19:33.11:0,33,1399	0/0:10,0:10:19.31:0,19,790	1/1:9,0:9:11.97:210,12,0	1/1:7,2:9:7.20:195,7,0	1/1:0,4:4:6.02:205,6,0	1/1:11,1:11:5.95:79,6,0	1/1:10,1:11:14.98:359,15,0	1/1:6,2:8:12.04:310,12,0	0/0:13,0:13:33.11:0,33,1354	0/0:17,0:15:15.05:0,15,474	0/0:8,0:8:15.05:0,15,544	0/0:35,0:35:56.68:0,57,2254	0/0:16,0:16:36.12:0,36,1650	0/1:5,4:9:0:0,0,0	1/1:16,0:16:11.82:155,12,0	0/0:8,0:7:6.02:0,6,178	0/0:9,0:8:12.04:0,12,458	0/0:9,0:9:18.04:0,18,446	0/0:15,0:15:33.09:0,33,1277
chr10	38574009	.	CCT	C	9084.82	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=15.231;DP=719;FS=29.543;HRun=0;HaplotypeScore=115.3807;InbreedingCoeff=0.9993;MQ=70.72;MQ0=4;MQRankSum=-4.648;QD=38.01;ReadPosRankSum=3.798;VQSLOD=3.7423;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:76.01:0,76,1494	1/1:2,8:10:21.07:307,21,0	0/0:63,1:31:55.96:0,56,1092	0/0:78,0:38:74.65:0,75,1168	1/1:1,15:16:42.14:609,42,0	0/0:24,0:24:72.25:0,72,1347	0/0:21,0:21:63.19:0,63,1120	0/0:27,0:27:67.89:0,68,1240	1/1:0,21:20:54.18:795,54,0	0/0:29,0:29:84.29:0,84,1571	0/0:18,0:18:54.17:0,54,968	1/1:0,33:33:96.32:1413,96,0	1/1:1,17:18:42.14:618,42,0	1/1:3,19:22:51.17:750,51,0	1/1:1,18:19:54.18:795,54,0	1/1:1,21:22:60.20:883,60,0	1/1:1,26:27:72.24:1060,72,0	0/0:33,0:33:99:0,99,1744	0/0:18,0:18:51.17:0,51,887	0/0:26,0:26:72.25:0,72,1327	0/0:19,0:19:57.20:0,57,1052	0/0:20,0:20:60.21:0,60,1108	1/1:1,18:19:51.17:751,51,0	1/1:1,31:32:75.25:1104,75,0	0/0:15,0:15:36.61:0,37,752	0/0:27,0:27:81.28:0,81,1516	0/0:20,0:20:60.21:0,60,1114	0/0:11,0:11:30.10:0,30,547
chr10	38574529	.	ACT	A	6148.54	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=12.102;DP=562;FS=8.662;HRun=0;HaplotypeScore=82.3397;InbreedingCoeff=0.9851;MQ=71.64;MQ0=0;MQRankSum=-0.027;QD=42.40;ReadPosRankSum=1.909;VQSLOD=6.3689;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,138,2556	1/1:0,10:10:27.09:412,27,0	0/0:8,0:7:18.06:0,18,330	0/0:9,0:9:10.21:0,10,151	1/1:1,9:10:24.08:367,24,0	0/0:27,0:27:81.26:0,81,1511	0/0:39,0:39:99:0,117,2182	0/0:28,0:28:75.25:0,75,1387	1/1:0,10:10:30.10:459,30,0	0/0:13,0:13:39.13:0,39,743	0/0:5,0:5:15.05:0,15,278	0/0:23,0:23:63.19:0,63,1151	1/1:0,23:23:69.23:1055,69,0	1/1:1,26:27:75.25:1147,75,0	1/1:1,23:24:60.20:919,60,0	1/1:0,11:11:33.11:505,33,0	1/1:1,29:30:84.29:1285,84,0	0/0:24,0:24:66.21:0,66,1242	0/0:23,0:23:69.22:0,69,1265	0/0:6,0:6:15.05:0,15,289	0/0:47,0:47:99:0,138,2620	0/0:11,0:11:30.10:0,30,579	0/0:15,0:15:45.15:0,45,860	0/0:33,0:33:99:0,99,1911	0/0:13,0:13:39.11:0,39,696	0/0:20,0:20:60.19:0,60,1096	0/0:15,0:15:45.15:0,45,869	0/0:12,0:12:36.11:0,36,660
chr10	38575095	.	GA	G	1591.95	PASS	AC=8;AF=0.148;AN=54;BaseQRankSum=8.197;DP=404;FS=4.665;HRun=9;HaplotypeScore=41.6274;InbreedingCoeff=0.9100;MQ=84.47;MQ0=1;MQRankSum=-0.276;QD=19.65;ReadPosRankSum=0.109;VQSLOD=3.7639;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,20:28:57.02:522,57,0	0/0:3,0:3:6.02:0,6,69	0/0:14,0:14:17.90:0,18,162	0/0:13,0:13:10.82:0,11,133	0/0:22,1:23:32.71:0,33,628	0/0:19,0:19:51.14:0,51,580	0/0:16,0:16:42.10:0,42,472	0/0:22,0:22:54.15:0,54,616	0/0:8,0:8:24.05:0,24,263	1/1:7,14:21:44.99:404,45,0	1/1:0,10:10:30.02:275,30,0	0/0:16,0:16:42.10:0,42,466	0/0:13,0:13:36.11:0,36,415	0/0:13,1:14:5.62:0,6,310	0/0:9,0:9:21.05:0,21,232	0/0:12,0:12:30.09:0,30,346	0/0:24,0:24:69.20:0,69,796	1/1:2,20:22:60.03:549,60,0	0/0:20,0:20:51.14:0,51,580	0/0:7,0:7:15.04:0,15,173	0/0:10,0:10:27.08:0,27,312	./.	0/0:7,0:8:23.90:0,24,257	0/0:5,0:5:15.04:0,15,173	0/0:18,0:19:53.99:0,54,603	0/0:15,1:16:11.63:0,12,379	0/0:16,0:16:48.14:0,48,553	0/0:10,0:10:30.09:0,30,346
chr10	38575577	.	CA	C	6459.45	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=12.224;DP=685;FS=8.996;HRun=2;HaplotypeScore=65.8622;InbreedingCoeff=0.9948;MQ=84.52;MQ0=0;MQRankSum=-1.078;QD=35.30;ReadPosRankSum=4.685;VQSLOD=4.9219;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,150,2141	1/1:0,4:4:12.04:156,12,0	0/0:22,0:21:63.06:0,63,844	0/0:21,0:21:54.08:0,54,737	1/1:0,25:25:75.24:971,75,0	0/0:12,0:12:36.12:0,36,539	0/0:36,0:36:99:0,108,1614	0/0:14,0:14:42.10:0,42,524	1/1:0,31:31:81.26:1051,81,0	0/0:22,0:22:65.96:0,66,954	0/0:11,0:11:33.10:0,33,475	0/0:31,0:31:90.27:0,90,1290	1/1:1,20:21:54.18:701,54,0	1/1:0,23:23:63.20:817,63,0	1/1:0,27:27:72.23:934,72,0	1/1:0,18:18:54.18:701,54,0	1/1:3,31:34:87.28:1128,87,0	0/0:31,0:31:90.29:0,90,1328	0/0:28,0:28:78.22:0,78,1093	0/0:26,0:26:72.24:0,72,1068	0/0:35,0:35:99:0,105,1552	0/0:17,0:17:42.13:0,42,603	0/0:25,0:25:72.22:0,72,1035	0/0:13,0:13:39.13:0,39,582	0/0:22,0:22:66.22:0,66,970	0/0:41,0:41:99:0,120,1798	0/0:27,0:27:81.25:0,81,1166	0/0:17,0:16:51.17:0,51,764
chr10	38575899	.	G	GGAT	21388.42	PASS	AB=0.947;AC=25;AF=0.446;AN=56;BaseQRankSum=-17.832;DP=835;FS=1.827;HRun=0;HaplotypeScore=116.4487;InbreedingCoeff=0.9307;MQ=79.66;MQ0=0;MQRankSum=-3.087;QD=52.68;ReadPosRankSum=4.816;VQSLOD=7.0324;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,48:54:99:2544,114,0	1/1:1,9:10:24.08:536,24,0	0/0:18,0:18:49.41:0,49,768	0/0:25,0:25:69.17:0,69,980	1/1:2,21:23:48.16:1063,48,0	0/0:27,0:27:78.27:0,78,1274	0/0:27,0:27:75.24:0,75,1200	0/0:27,0:27:60.20:0,60,953	1/1:6,49:56:99:3342,150,0	1/1:5,38:44:99:2561,120,0	1/1:2,14:16:36.12:804,36,0	0/0:54,0:54:99:0,141,2293	1/1:5,30:35:90.31:1986,90,0	1/1:5,37:43:99:2542,114,0	1/1:6,29:36:84.29:1860,84,0	1/1:0,18:18:48.16:1072,48,0	1/1:2,23:26:66.23:1459,66,0	1/1:1,26:27:72.25:1609,72,0	0/0:22,0:22:63.20:0,63,983	0/0:28,0:28:78.26:0,78,1247	0/0:54,0:54:99:0,156,2474	0/0:29,0:29:87.27:0,87,1369	0/0:21,0:21:60.20:0,60,979	0/0:35,0:35:99:0,102,1662	0/0:22,0:22:66.20:0,66,1044	0/1:17,1:18:12.87:13,0,778	0/0:32,0:32:96.28:0,96,1516	0/0:8,0:8:24.08:0,24,392
chr10	38576566	.	CCACACA	C	2868.21	PASS	AB=0.981;AC=19;AF=0.339;AN=56;BaseQRankSum=2.893;DP=902;FS=65.067;HRun=0;HaplotypeScore=381.3054;InbreedingCoeff=0.7350;MQ=49.19;MQ0=17;MQRankSum=-9.403;QD=9.92;ReadPosRankSum=1.323;VQSLOD=0.0814;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:57:95.03:0,95,2124	1/1:5,5:12:15.05:313,15,0	0/0:46,0:10:17.66:0,18,430	0/1:44,0:10:12.39:12,0,143	1/1:15,16:34:5.93:86,6,0	0/0:28,0:28:69.24:0,69,2112	0/0:23,0:23:53.90:0,54,1209	0/0:43,0:42:69.11:0,69,1354	1/1:10,12:24:29.99:466,30,0	0/0:45,0:44:99:0,111,2581	0/0:19,0:19:54.17:0,54,1427	0/1:26,0:26:41.25:64,0,41	1/1:12,0:18:23.54:270,24,0	1/1:10,11:23:15.01:254,15,0	1/1:7,18:29:21.12:674,21,0	1/1:7,12:23:26.85:495,27,0	1/1:12,4:22:13.03:351,13,0	0/0:20,0:22:37.14:0,37,1137	0/0:29,0:25:41.13:0,41,915	0/0:30,0:30:75.24:0,75,1956	0/0:73,0:71:99:0,108,2612	0/0:40,0:40:60.58:0,61,1770	0/1:28,0:28:86.71:87,0,102	0/0:35,0:35:22.10:0,22,239	0/0:20,0:20:33.11:0,33,911	0/0:36,0:36:99:0,99,2528	0/0:37,0:36:78.27:0,78,1931	0/0:24,0:25:54.19:0,54,1285
chr10	38576579	.	CACACACAT	C	1933.99	PASS	AB=1.000;AC=14;AF=0.250;AN=56;BaseQRankSum=7.442;DP=894;FS=31.377;HRun=0;HaplotypeScore=382.6925;InbreedingCoeff=0.2586;MQ=49.34;MQ0=14;MQRankSum=-6.072;QD=6.86;ReadPosRankSum=4.050;VQSLOD=0.7747;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,99,1687	0/1:10,0:10:38:38,0,50	0/0:37,0:11:32.86:0,33,432	0/0:38,0:8:17.19:0,17,125	0/1:29,0:29:0.48:0,0,50	0/0:31,0:30:78.19:0,78,2646	0/0:28,0:28:70.25:0,70,1012	0/0:41,0:40:93.15:0,93,1320	0/1:29,0:26:18.22:18,0,181	0/0:48,0:46:99:0,129,2833	0/0:22,0:22:57.24:0,57,1531	1/1:21,9:29:54.06:754,54,0	0/1:20,0:20:42.93:244,0,43	0/1:21,0:21:21.12:21,0,64	0/1:33,0:32:27.71:28,0,269	0/1:26,0:26:22.43:22,0,267	0/1:26,0:26:52.28:52,0,82	0/0:21,0:20:35.48:0,35,1196	0/0:27,0:22:52.24:0,52,905	0/0:33,0:33:87.34:0,87,1902	0/0:68,0:66:99:0,113,2241	0/0:35,0:35:73.08:0,73,1605	1/1:20,8:29:44.99:664,45,0	1/1:26,3:29:11.82:260,12,0	0/0:18,0:18:33.09:0,33,1055	0/0:44,0:44:99:0,129,3407	0/0:38,0:37:78.04:0,78,1631	0/0:26,0:26:53.99:0,54,1145
chr10	38576583	.	C	CACAT	11608.34	PASS	AB=0.946;AC=32;AF=0.571;AN=56;BaseQRankSum=-8.723;DP=901;FS=3.773;HRun=0;HaplotypeScore=301.9127;InbreedingCoeff=0.4191;MQ=50.06;MQ0=11;MQRankSum=5.706;QD=17.62;ReadPosRankSum=0.257;VQSLOD=4.0246;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:30,19:50:32.67:715,33,0	0/1:10,0:10:18.53:41,0,19	0/0:38,0:12:14.99:0,15,132	0/0:41,0:9:2.98:0,3,21	0/1:26,0:26:19.42:44,0,19	0/0:32,0:32:72.16:0,72,1008	0/0:24,0:24:27:0,27,281	1/1:41,0:40:26.92:222,27,0	0/1:26,0:23:4.56:185,0,5	1/1:17,25:44:84.11:1400,84,0	0/1:6,17:24:3.60:753,0,4	0/0:30,0:29:47.49:0,47,333	0/0:21,0:21:17.17:0,17,251	0/1:23,0:23:6.31:137,0,6	0/1:34,0:33:39.65:220,0,40	0/1:27,0:27:24.71:222,0,25	0/1:26,0:26:63.84:64,0,68	1/1:10,11:20:30.38:655,30,0	1/1:15,9:22:26.94:419,27,0	1/1:12,23:36:20.21:964,20,0	1/1:33,34:66:39.13:934,39,0	1/1:16,17:37:29.14:667,29,0	0/0:29,0:28:25.79:0,26,185	0/0:27,0:27:5.87:0,6,36	1/1:5,14:20:27.09:646,27,0	1/1:14,35:51:99:1941,114,0	1/1:17,22:39:36.12:825,36,0	1/1:15,12:27:24.08:553,24,0
chr10	38576671	.	A	AACACAC	13509.15	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=1.360;DP=977;FS=1.934;HRun=0;HaplotypeScore=214.2140;InbreedingCoeff=0.9819;MQ=63.37;MQ0=9;MQRankSum=-16.486;QD=44.58;ReadPosRankSum=0.147;VQSLOD=4.8150;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,120,2486	1/1:2,13:15:36.12:1160,36,0	0/0:50,0:30:50.20:0,50,826	0/0:56,0:49:72.30:0,72,1636	1/1:2,17:20:39.13:1234,39,0	0/0:33,0:33:90.26:0,90,1848	0/0:42,0:42:96.30:0,96,1949	0/0:56,0:57:99:0,141,2903	1/1:4,21:28:27.09:887,27,0	0/0:48,0:48:99:0,126,2753	0/0:26,0:26:66.22:0,66,1408	1/1:6,22:32:36.04:1181,36,0	1/1:7,21:27:42.14:1384,42,0	1/1:5,23:31:27.09:896,27,0	1/1:11,32:44:63.22:2074,63,0	1/1:7,29:38:57.20:1913,57,0	1/1:9,2:10:6.02:164,6,0	0/0:16,0:17:14.23:0,14,936	0/0:33,0:32:84.28:0,84,1747	0/0:37,0:37:99:0,102,2177	0/0:62,0:62:99:0,157,3310	0/0:50,0:50:99:0,138,2876	1/1:5,23:30:59.93:1781,60,0	1/1:14,9:23:32.71:834,33,0	0/0:36,0:36:99:0,99,2145	0/0:36,0:36:87.28:0,87,1842	0/0:30,0:30:72.24:0,72,1534	0/0:17,0:17:45.15:0,45,992
chr10	38576682	.	A	AC	2186.88	PASS	AB=0.979;AC=12;AF=0.214;AN=56;BaseQRankSum=18.137;DP=948;FS=2.342;HRun=1;HaplotypeScore=168.2473;InbreedingCoeff=-0.0094;MQ=64.02;MQ0=9;MQRankSum=-16.886;QD=7.95;ReadPosRankSum=-0.424;VQSLOD=0.7705;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,135,1813	1/1:13,0:13:28.59:189,29,0	0/0:50,0:34:92.25:0,92,1106	0/0:65,0:57:99:0,150,1926	0/1:20,0:20:3.65:301,0,4	0/0:32,0:32:96.28:0,96,1290	0/0:39,0:39:99:0,114,1543	0/0:56,0:56:99:0,162,2189	0/1:25,0:25:88.25:94,0,88	0/0:51,0:51:99:0,144,1981	0/0:24,0:24:72.22:0,72,972	0/1:26,0:26:54.17:143,0,54	0/1:25,0:24:21.68:187,0,22	0/1:26,0:26:82.64:83,0,141	0/1:39,0:38:77.94:338,0,78	0/1:32,0:32:81.58:171,0,82	0/1:11,0:10:29.64:30,0,101	0/0:17,0:18:41.90:0,42,661	0/0:32,0:31:93.29:0,93,1260	0/0:35,0:35:99:0,102,1426	0/0:61,1:62:99:0,174,2403	0/0:49,0:49:99:0,147,1966	0/1:34,1:35:99:529,0,141	0/1:18,5:21:37.21:280,0,37	0/0:35,0:35:99:0,102,1388	0/0:34,0:34:93.31:0,93,1294	0/0:28,0:28:84.28:0,84,1162	0/0:16,0:16:48.15:0,48,654
chr10	38576758	.	CAAT	C	625.09	PASS	AB=0.856;AC=8;AF=0.143;AN=56;BaseQRankSum=8.410;DP=994;FS=0.557;HRun=0;HaplotypeScore=194.2454;InbreedingCoeff=-0.1566;MQ=59.57;MQ0=32;MQRankSum=-6.315;QD=3.27;ReadPosRankSum=-3.934;VQSLOD=1.1588;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:85.64:0,86,2752	0/1:1,1:3:60.84:73,0,61	0/0:87,0:31:74.93:0,75,1465	0/0:85,0:34:46.95:0,47,1246	0/0:25,2:25:16.04:0,16,524	0/0:45,1:46:81.58:0,82,2819	0/0:41,0:40:99:0,107,2452	0/0:47,0:47:99:0,138,3115	0/1:24,4:27:99:186,0,726	0/0:40,0:39:99:0,114,2413	0/0:23,0:23:63.22:0,63,1439	0/0:29,0:29:51.38:0,51,955	0/1:16,2:16:99:131,0,345	0/1:24,4:25:59.49:59,0,558	0/1:29,5:32:3.51:4,0,874	0/1:18,1:19:99:126,0,455	0/1:23,3:22:99:168,0,272	0/0:18,0:19:30.67:0,31,959	0/0:25,0:24:63.22:0,63,1417	0/0:33,0:33:99:0,99,2195	0/0:65,2:68:84.83:0,85,4051	0/0:37,0:37:99:0,108,2473	0/1:31,0:31:8.05:8,0,1256	0/0:42,3:43:33.91:0,34,1046	0/0:27,1:28:78.08:0,78,1687	0/0:26,0:24:69.07:0,69,1547	0/0:31,0:31:93.31:0,93,2089	0/0:19,0:19:54.19:0,54,1214
chr10	38576761	.	T	TAC	3511.96	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=5.553;DP=1013;FS=9.910;HRun=0;HaplotypeScore=179.9706;InbreedingCoeff=0.9284;MQ=58.69;MQ0=36;MQRankSum=-5.338;QD=11.79;ReadPosRankSum=-1.092;VQSLOD=2.3196;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:82.84:0,83,1046	1/1:3,0:3:8.13:37,8,0	0/0:86,0:27:13.24:0,13,159	0/0:84,1:32:17.19:0,17,119	1/1:26,0:25:7.65:29,8,0	0/0:45,0:45:99:0,108,1276	0/0:39,0:40:80.56:0,81,925	0/0:49,0:49:87.24:0,87,1025	1/1:25,0:27:29.73:182,30,0	0/0:39,0:39:83.76:0,84,937	0/0:23,0:24:62.98:0,63,731	1/1:18,14:32:55.04:819,55,0	1/1:15,0:15:22.83:131,23,0	1/1:27,0:26:11.18:77,11,0	1/1:34,0:32:21.68:133,22,0	1/1:17,0:18:16.24:185,16,0	1/1:28,0:23:9.01:69,9,0	0/0:18,0:19:45.42:0,45,525	0/0:26,0:25:42.13:0,42,506	0/0:33,1:34:33.04:0,33,878	0/0:66,0:69:99:0,168,1932	0/0:37,0:38:90.11:0,90,1061	1/1:20,12:32:2.67:895,3,0	1/1:10,36:44:15.34:955,15,0	0/0:27,0:29:71.90:0,72,830	0/0:27,0:26:50.98:0,51,588	0/0:31,0:31:72.20:0,72,855	0/0:20,0:20:45.14:0,45,542
chr10	38576779	.	C	CA	1555.51	PASS	AB=0.882;AC=11;AF=0.196;AN=56;BaseQRankSum=13.608;DP=1040;FS=8.988;HRun=1;HaplotypeScore=158.2628;InbreedingCoeff=-0.2444;MQ=52.79;MQ0=39;MQRankSum=-5.280;QD=5.24;ReadPosRankSum=2.402;VQSLOD=0.0599;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:30.28:0,30,1461	0/1:7,0:7:68.88:69,0,100	0/0:87,0:17:37.19:0,37,444	0/0:86,0:21:49.31:0,49,545	0/1:17,12:26:99:142,0,202	0/0:45,0:45:96.96:0,97,1734	0/0:37,1:37:99:0,102,1374	0/0:56,0:56:99:0,162,2157	0/1:23,4:26:99:367,0,287	0/0:43,0:42:99:0,120,1614	0/0:29,0:29:81.27:0,81,1105	0/1:33,0:33:68.51:69,0,225	0/1:10,6:15:99:229,0,151	0/1:18,5:20:99:199,0,224	0/1:24,13:35:99:375,0,177	0/1:20,1:19:99:109,0,226	0/1:24,4:24:68:68,0,402	0/0:21,0:21:44.50:0,44,662	0/0:31,0:28:66.22:0,66,895	0/0:33,0:34:94.27:0,94,1288	0/0:76,0:74:99:0,204,2710	0/0:36,0:36:99:0,105,1422	0/1:32,0:32:49.66:50,0,240	0/1:44,0:44:27.29:27,0,115	0/0:30,0:30:83.89:0,84,1120	0/0:33,0:31:93.25:0,93,1238	0/0:29,0:30:84.17:0,84,1117	0/0:20,0:18:48.16:0,48,668
chr10	38577919	.	GTGCA	G	9906.87	PASS	AB=0.529;AC=21;AF=0.375;AN=56;BaseQRankSum=17.627;DP=814;FS=20.672;HRun=0;HaplotypeScore=150.3421;InbreedingCoeff=0.9455;MQ=61.15;MQ0=1;MQRankSum=-2.237;QD=32.70;ReadPosRankSum=5.131;VQSLOD=3.5286;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,102,2119	0/1:1,8:9:3.93:317,0,4	0/0:37,0:33:87.04:0,87,1380	0/0:37,0:35:92.68:0,93,1408	1/1:0,18:18:21.54:394,22,0	0/0:28,0:28:79.12:0,79,1733	0/0:35,0:35:93.11:0,93,1627	0/0:25,0:25:72.12:0,72,1068	1/1:0,27:28:38.77:699,39,0	0/0:30,0:30:65.82:0,66,1500	0/0:24,0:24:60.11:0,60,1217	1/1:3,31:35:49.52:969,50,0	1/1:13,7:20:53.87:703,54,0	1/1:15,15:29:80.84:1177,81,0	1/1:1,36:37:69.20:1283,69,0	1/1:8,16:24:69.06:1116,69,0	1/1:14,16:30:83.98:1262,84,0	0/0:28,0:28:69.67:0,70,1682	0/0:27,0:27:76.56:0,77,1013	0/0:18,0:18:45.02:0,45,768	0/0:63,0:62:99:0,186,3603	0/0:17,0:17:51.02:0,51,782	1/1:10,15:24:62.82:946,63,0	1/1:2,44:46:54.09:1040,54,0	0/0:26,0:26:69.08:0,69,1281	0/0:35,0:35:99:0,105,2205	0/0:22,0:22:65.74:0,66,1124	0/0:17,0:17:51.07:0,51,1045
chr10	38578171	.	G	GT	12530.71	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=0.456;DP=881;FS=0.260;HRun=0;HaplotypeScore=124.7051;InbreedingCoeff=0.9789;MQ=78.74;MQ0=0;MQRankSum=-4.911;QD=36.01;ReadPosRankSum=8.533;VQSLOD=3.4060;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,108,1409	1/1:1,8:9:17.92:241,18,0	0/0:36,0:35:44.29:0,44,965	0/0:36,0:34:84.87:0,85,998	1/1:0,20:20:48.09:674,48,0	0/0:24,0:24:69.21:0,69,929	0/0:25,0:25:72.19:0,72,938	0/0:50,0:50:99:0,128,1767	1/1:2,34:36:61.38:1125,61,0	0/0:39,0:39:99:0,111,1461	0/0:19,0:19:56.92:0,57,686	1/1:4,30:35:84.22:1202,84,0	1/1:1,44:45:99:1747,120,0	1/1:0,27:27:72.24:1051,72,0	1/1:4,38:41:99:1554,99,0	1/1:0,41:41:99:1709,117,0	1/1:6,33:39:99:1568,114,0	0/0:15,1:16:4.41:0,4,544	0/0:14,0:14:41.72:0,42,537	0/0:23,0:23:63.11:0,63,728	0/0:52,0:52:99:0,127,1931	0/0:35,0:35:99:0,99,1323	1/1:1,22:23:51.17:739,51,0	1/1:3,28:31:67.27:921,67,0	0/0:29,0:29:84.25:0,84,1101	0/0:48,0:48:99:0,144,1809	0/0:36,0:36:99:0,102,1265	0/0:13,0:13:39.12:0,39,527
chr10	38578227	.	GTGTGTGTGTGTC	G	3030.65	PASS	AB=1.000;AC=8;AF=0.143;AN=56;BaseQRankSum=5.552;DP=889;FS=0.522;HRun=0;HaplotypeScore=358.0789;InbreedingCoeff=0.6776;MQ=59.78;MQ0=2;MQRankSum=-3.200;QD=26.82;ReadPosRankSum=-2.873;VQSLOD=1.5563;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,120,4844	0/1:15,0:15:7.93:8,0,1152	0/0:26,0:16:29.25:0,29,1144	0/0:40,0:28:49.20:0,49,1651	0/0:18,0:18:33.09:0,33,1056	0/0:16,0:16:45.15:0,45,2166	0/0:21,0:21:63.20:0,63,3004	0/0:38,0:38:99:0,102,4490	0/1:39,0:39:44.22:44,0,3009	0/0:41,0:40:99:0,108,3850	0/0:24,0:24:63.20:0,63,2592	1/1:10,20:30:69.22:2341,69,0	0/0:41,0:41:8.73:0,9,3132	0/0:24,0:24:13.28:0,13,2226	0/0:48,0:48:20.81:0,21,3932	0/0:46,0:46:11.75:0,12,3533	0/0:31,0:31:13.22:0,13,2390	0/0:26,0:26:66.62:0,67,2845	0/0:18,0:17:45.12:0,45,1947	0/0:25,0:25:63.14:0,63,3276	0/0:67,0:67:99:0,172,8526	0/0:45,0:46:99:0,123,6007	1/1:5,7:11:15.05:510,15,0	1/1:12,5:16:12.60:275,13,0	0/0:36,0:36:99:0,105,4984	0/0:50,0:49:99:0,129,6878	0/0:31,0:31:90.29:0,90,4617	0/0:20,0:20:57.17:0,57,3186
chr10	38578237	.	GTC	G	1419.51	PASS	AB=0.964;AC=15;AF=0.268;AN=56;BaseQRankSum=6.218;DP=916;FS=1.171;HRun=0;HaplotypeScore=197.5100;InbreedingCoeff=0.1636;MQ=58.39;MQ0=4;MQRankSum=-4.927;QD=3.44;ReadPosRankSum=-9.660;VQSLOD=-0.0511;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:43,2:45:99:133,0,547	0/0:14,0:14:5.36:0,5,98	0/0:28,0:16:28.34:0,28,416	0/1:40,0:27:5.94:6,0,595	0/0:17,1:18:7.45:0,7,95	0/0:19,0:19:57.10:0,57,906	0/0:23,0:23:66.17:0,66,1110	0/0:41,0:41:99:0,99,1840	0/1:41,3:44:99:161,0,152	0/1:41,2:42:99:231,0,426	0/1:21,2:23:75.81:76,0,322	1/1:30,1:31:76.04:478,76,0	0/0:37,0:37:14.72:0,15,288	0/1:27,0:27:49.73:50,0,107	0/1:50,0:50:78.44:78,0,193	0/1:44,2:46:42.63:43,0,185	0/1:30,1:31:99:108,0,153	0/0:26,1:27:42.15:0,42,438	0/0:21,0:20:58.74:0,59,839	0/0:25,0:25:49.79:0,50,1107	0/0:72,0:72:99:0,198,3197	0/0:44,0:44:99:0,123,2170	1/1:12,0:11:14.53:84,15,0	1/1:18,2:19:21.48:145,21,0	0/0:32,0:32:71.10:0,71,1625	0/0:51,0:51:99:0,150,2462	0/0:31,0:31:93.24:0,93,1650	0/0:20,0:20:60.12:0,60,1069
chr10	38578421	.	C	CTG	3673.02	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=4.628;DP=1118;FS=14.957;HRun=0;HaplotypeScore=213.3622;InbreedingCoeff=0.9956;MQ=60.98;MQ0=9;MQRankSum=-0.459;QD=30.36;ReadPosRankSum=0.249;VQSLOD=3.3876;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,126,1606	0/0:21,0:21:48.13:0,48,550	0/0:39,0:25:44.34:0,44,381	0/0:49,0:35:47.37:0,47,502	0/0:22,0:22:48.62:0,49,569	0/0:21,0:22:54:0,54,642	0/0:32,0:33:87.10:0,87,1045	0/0:57,0:57:99:0,102,1192	0/0:62,0:62:99:0,142,1634	0/0:49,0:49:99:0,117,1425	0/0:29,0:28:66.19:0,66,801	1/1:15,26:41:96.31:1514,96,0	0/0:33,0:33:75.17:0,75,854	0/0:38,0:38:94.79:0,95,1082	0/0:49,0:49:99:0,114,1252	0/0:44,0:44:99:0,99,1126	0/0:38,0:38:49.30:0,49,807	0/0:33,0:33:62.44:0,62,822	0/0:28,0:27:37.33:0,37,655	0/0:42,0:42:99:0,114,1402	0/0:90,0:91:99:0,182,2346	0/0:23,0:23:54.16:0,54,654	1/1:5,16:20:16.23:518,16,0	1/1:30,29:58:60.30:1640,60,0	0/0:43,0:43:99:0,114,1354	0/0:37,0:37:78.24:0,78,949	0/0:36,0:36:90.72:0,91,1103	0/0:20,0:21:50.99:0,51,605
chr10	38578513	.	A	ATGTGTGTC	12673.37	PASS	AB=0.667;AC=21;AF=0.375;AN=56;BaseQRankSum=-5.497;DP=1006;FS=0.000;HRun=0;HaplotypeScore=272.9158;InbreedingCoeff=0.9638;MQ=58.35;MQ0=5;MQRankSum=-13.586;QD=33.62;ReadPosRankSum=2.373;VQSLOD=4.1383;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,124,2766	1/1:2,7:10:9.03:361,9,0	0/0:41,0:30:65.05:0,65,1114	0/0:55,0:44:90.58:0,91,1913	0/1:8,8:16:0:0,0,0	0/0:27,0:26:77.43:0,77,1730	0/0:46,0:46:99:0,111,2490	0/0:36,0:36:78.16:0,78,1521	1/1:14,36:51:48.64:1905,49,0	0/0:36,0:35:99:0,102,2559	0/0:20,0:20:54.13:0,54,1223	1/1:7,34:44:39.13:1444,39,0	1/1:7,22:30:36.12:1412,36,0	1/1:10,27:40:36.12:1402,36,0	1/1:9,34:47:45.15:1777,45,0	1/1:10,26:36:39.13:1586,39,0	1/1:23,5:28:29.20:825,29,0	0/0:31,0:31:42.21:0,42,1696	0/0:30,0:30:66.20:0,66,1441	0/0:33,0:32:81.09:0,81,1685	0/0:89,0:88:99:0,214,5077	0/0:42,0:42:99:0,117,2473	1/1:16,6:22:23.29:744,23,0	1/1:39,13:52:43.71:1217,44,0	0/0:32,0:33:80.92:0,81,1895	0/0:23,0:22:45.13:0,45,1053	0/0:29,0:29:79.99:0,80,1741	0/0:8,0:8:18.02:0,18,354
chr10	38578962	.	T	TGG	4074.85	PASS	AB=0.563;AC=21;AF=0.375;AN=56;BaseQRankSum=15.154;DP=581;FS=8.315;HRun=7;HaplotypeScore=103.7911;InbreedingCoeff=0.9344;MQ=76.45;MQ0=0;MQRankSum=-2.022;QD=19.13;ReadPosRankSum=2.669;VQSLOD=1.2273;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:90.25:0,90,1048	1/1:2,0:10:20.15:125,20,0	0/0:17,0:17:42.07:0,42,453	0/0:21,0:20:49.14:0,49,483	1/1:4,0:20:23.96:236,24,0	0/0:18,0:17:45.13:0,45,522	0/0:19,0:19:54.16:0,54,629	0/0:18,0:18:45.13:0,45,524	1/1:5,0:18:31.55:185,32,0	0/0:22,0:22:57.09:0,57,632	0/0:14,0:15:44.86:0,45,490	1/1:3,14:17:40.34:611,40,0	0/1:2,0:9:6.68:53,0,7	1/1:1,0:21:49.92:317,50,0	1/1:2,0:22:53.34:360,53,0	1/1:2,0:21:50.10:332,50,0	1/1:6,0:39:56.76:569,57,0	0/0:30,0:30:84.25:0,84,979	0/0:18,0:18:54.12:0,54,614	0/0:9,0:9:21.05:0,21,234	0/0:57,0:57:99:0,150,1723	0/0:19,0:19:54.14:0,54,618	1/1:0,7:7:18.06:292,18,0	1/1:2,26:29:62.77:996,63,0	0/0:21,0:21:60.18:0,60,695	0/0:17,0:17:42.10:0,42,481	0/0:22,0:22:54.13:0,54,617	0/0:9,0:9:27.08:0,27,315
chr10	38579309	.	T	TATCATC	6880.83	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-8.011;DP=750;FS=2.613;HRun=0;HaplotypeScore=146.8230;InbreedingCoeff=0.9763;MQ=58.85;MQ0=4;MQRankSum=-10.476;QD=33.73;ReadPosRankSum=0.254;VQSLOD=4.8970;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:54.05:0,54,774	1/1:5,9:15:12.04:385,12,0	0/0:26,0:18:12.19:0,12,276	0/0:17,0:12:14.93:0,15,127	1/1:9,21:31:38.82:704,39,0	0/0:27,0:27:78.25:0,78,1492	0/0:29,0:30:81.23:0,81,1515	0/0:36,0:35:44.96:0,45,593	1/1:9,21:37:39.08:1151,39,0	0/0:29,0:29:74.96:0,75,1261	0/0:22,0:22:48.14:0,48,927	0/0:38,0:38:39.34:0,39,1126	1/1:5,17:22:42.14:1333,42,0	1/1:3,20:25:24.08:783,24,0	1/1:5,19:27:33.05:965,33,0	1/1:6,25:33:39.13:1294,39,0	1/1:5,9:14:9.03:265,9,0	0/0:26,0:25:60.17:0,60,1081	0/0:17,0:13:24.08:0,24,465	0/0:29,0:29:63.12:0,63,1016	0/0:38,0:38:87.15:0,87,1513	0/0:25,0:25:50.86:0,51,780	0/0:19,0:19:26.04:0,26,645	0/0:32,0:32:59.01:0,59,1116	0/0:30,0:30:69.13:0,69,1158	0/0:33,0:33:78.17:0,78,1421	0/0:31,0:32:84.21:0,84,1527	0/0:17,0:17:33.09:0,33,568
chr10	38580050	.	CT	C	8249.90	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=13.870;DP=655;FS=0.636;HRun=1;HaplotypeScore=63.8945;InbreedingCoeff=0.9994;MQ=86.57;MQ0=1;MQRankSum=0.634;QD=38.37;ReadPosRankSum=3.759;VQSLOD=5.4314;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:57:99:0,169,2682	1/1:0,13:13:36.12:501,36,0	0/0:14,0:14:42.14:0,42,656	0/0:30,0:30:84.60:0,85,1199	1/1:0,18:18:54.18:754,54,0	0/0:14,0:14:42.12:0,42,647	0/0:30,0:30:90.27:0,90,1389	0/0:31,0:31:90.30:0,90,1419	1/1:0,19:19:51.17:712,51,0	0/0:17,0:17:48.16:0,48,747	0/0:19,0:19:57.19:0,57,911	1/1:0,21:21:57.19:797,57,0	1/1:0,23:23:69.23:962,69,0	1/1:0,15:15:45.15:629,45,0	1/1:0,17:17:39.13:545,39,0	1/1:0,15:15:45.15:629,45,0	1/1:0,29:29:78.26:1090,78,0	0/0:31,0:31:93.29:0,93,1461	0/0:28,0:28:84.29:0,84,1344	0/0:17,0:17:51.17:0,51,816	0/0:52,0:51:99:0,147,2324	0/0:16,0:16:48.16:0,48,764	1/1:0,17:17:48.16:670,48,0	1/1:0,28:28:69.23:963,69,0	0/0:23,0:23:69.24:0,69,1103	0/0:35,0:35:99:0,105,1658	0/0:19,0:19:57.19:0,57,910	0/0:7,0:7:21.07:0,21,336
chr10	38581242	.	CACG	C	6191.23	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=12.158;DP=574;FS=21.211;HRun=0;HaplotypeScore=111.3365;InbreedingCoeff=0.9921;MQ=88.44;MQ0=0;MQRankSum=-4.050;QD=34.78;ReadPosRankSum=5.877;VQSLOD=3.8272;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:96.33:0,96,2074	1/1:3,5:8:12.04:188,12,0	0/0:24,0:24:62.85:0,63,1167	0/0:26,0:26:63.21:0,63,1179	1/1:3,8:11:15.05:235,15,0	0/0:16,0:16:45.15:0,45,972	0/0:30,0:30:81.28:0,81,1747	0/0:34,0:34:89.33:0,89,1239	1/1:2,17:19:48.16:751,48,0	0/0:21,0:21:60.21:0,60,1277	0/0:12,0:12:33.10:0,33,673	1/1:1,15:16:39.13:610,39,0	1/1:4,20:23:48.16:750,48,0	1/1:0,13:13:33.11:516,33,0	1/1:3,19:22:60.20:938,60,0	1/1:3,13:16:36.12:563,36,0	1/1:5,12:17:30.10:469,30,0	0/0:26,0:26:66.21:0,66,1366	0/0:16,0:16:39.11:0,39,523	0/0:15,0:15:42.07:0,42,626	0/0:50,0:50:99:0,117,1724	0/0:14,0:14:21.07:0,21,348	1/1:2,9:11:24.08:375,24,0	1/1:2,19:20:51.17:798,51,0	0/0:15,0:15:33.07:0,33,519	0/0:29,0:29:72.19:0,72,1089	0/0:20,0:20:57.19:0,57,950	0/0:10,0:10:30.10:0,30,463
chr10	38582932	.	GAA	G	1344.79	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=2.494;DP=476;FS=0.567;HRun=11;HaplotypeScore=83.1358;InbreedingCoeff=0.9375;MQ=70.13;MQ0=8;MQRankSum=0.619;QD=12.23;ReadPosRankSum=5.480;VQSLOD=1.5980;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:31:53.29:0,53,248	1/1:4,4:9:11.97:112,12,0	0/0:28,0:15:18:0,18,194	0/0:31,0:11:14.50:0,14,134	1/1:6,8:14:17.66:217,18,0	0/0:17,0:18:42.10:0,42,559	0/0:20,0:21:51.12:0,51,684	0/0:21,0:23:57.08:0,57,765	1/1:5,4:9:11.99:128,12,0	0/0:9,0:15:17.54:0,18,69	0/0:4,0:10:17.98:0,18,98	0/0:17,0:17:30.06:0,30,416	1/1:5,9:14:17.99:191,18,0	1/1:5,8:13:5.98:64,6,0	1/1:11,2:13:21.57:250,22,0	1/1:11,5:16:12.32:264,12,0	1/1:12,10:20:7.58:314,8,0	0/0:6,0:13:22.95:0,23,91	0/0:11,0:12:32.60:0,33,468	0/0:13,0:13:30.23:0,30,407	0/0:25,0:27:70.06:0,70,979	0/0:7,0:7:15.05:0,15,230	0/0:15,0:16:35.14:0,35,432	0/0:23,0:22:28.39:0,28,365	0/0:10,0:11:29.52:0,30,353	0/0:24,0:25:62.69:0,63,910	0/0:17,0:19:54.06:0,54,762	0/0:6,0:6:18.06:0,18,276
chr10	38582945	.	C	CAG	1390.95	PASS	AB=0.967;AC=28;AF=0.538;AN=52;BaseQRankSum=7.830;DP=526;FS=3.567;HRun=0;HaplotypeScore=115.9399;InbreedingCoeff=0.6170;MQ=58.85;MQ0=11;MQRankSum=-1.497;QD=4.88;ReadPosRankSum=-0.977;VQSLOD=2.4770;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:36,0:37:8.99:76,9,0	1/1:6,1:7:6:65,6,0	./.	./.	1/1:18,2:22:12:123,12,0	0/1:19,1:20:15.70:16,0,250	0/0:17,0:18:35.76:0,36,360	0/0:23,0:23:24.15:0,24,215	1/1:11,1:14:15.01:160,15,0	1/1:24,0:26:29.91:251,30,0	1/1:11,0:11:3:25,3,0	1/1:16,0:16:2.98:21,3,0	1/1:12,0:13:5.92:43,6,0	1/1:11,0:10:5.99:48,6,0	0/1:19,1:19:5.91:235,0,6	1/1:17,0:17:24.04:257,24,0	1/1:25,0:22:0.29:150,0,0	1/1:16,0:16:11.99:101,12,0	0/0:10,0:10:2.96:0,3,19	0/0:15,0:15:14.85:0,15,138	0/0:35,0:35:35.75:0,36,326	0/0:9,0:9:15.03:0,15,158	0/1:11,0:11:0:0,0,0	0/1:15,0:13:0:0,0,0	0/0:19,0:19:29.73:0,30,283	0/0:26,0:29:35.59:0,36,341	0/0:22,0:22:35.35:0,35,360	0/0:8,0:7:9.01:0,9,91
chr10	38582947	.	G	GAGAGAGAGAGAGAGACAGAC	2691.55	PASS	AB=1.000;AC=12;AF=0.222;AN=54;BaseQRankSum=5.515;DP=552;FS=13.974;HRun=0;HaplotypeScore=289.1001;InbreedingCoeff=0.3073;MQ=56.57;MQ0=12;MQRankSum=-5.214;QD=14.39;ReadPosRankSum=-1.788;VQSLOD=0.2287;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:38,0:38:0.17:0,0,147	0/0:7,0:7:9.49:0,9,169	./.	0/0:30,0:7:1.82:0,2,5	0/1:20,0:20:0.03:0,0,134	0/0:22,0:21:32.72:0,33,1443	0/0:17,0:17:48.15:0,48,1991	0/0:27,0:27:62.54:0,63,1416	0/0:14,0:14:3.01:0,3,255	0/1:28,0:28:88.47:729,0,88	0/0:11,0:11:6.01:0,6,76	1/1:17,6:23:12.04:887,12,0	0/1:14,0:13:14.34:14,0,174	0/1:12,0:11:7.68:8,0,20	0/0:22,0:20:20.03:0,20,757	0/0:17,0:17:0.66:0,1,466	0/0:25,0:22:6.45:0,6,709	0/1:17,0:16:86.62:268,0,87	0/0:14,0:14:16.29:0,16,283	0/0:14,0:14:24.55:0,25,725	0/0:36,0:35:78.24:0,78,2015	0/0:9,0:9:18.06:0,18,770	1/1:14,0:14:9.02:325,9,0	1/1:21,0:19:15.05:605,15,0	0/0:20,0:20:36.11:0,36,1235	0/0:28,0:28:54.18:0,54,1881	0/0:21,0:21:43.03:0,43,1883	0/0:8,0:7:15.05:0,15,514
chr10	38583098	.	GA	G	899.26	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=7.135;DP=566;FS=2.880;HRun=9;HaplotypeScore=66.6546;InbreedingCoeff=0.9779;MQ=75.20;MQ0=1;MQRankSum=-0.589;QD=14.99;ReadPosRankSum=2.057;VQSLOD=3.9699;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:40:93.07:0,93,1030	0/0:9,0:9:24.07:0,24,277	0/0:24,0:22:40.77:0,41,400	0/0:19,0:17:17.22:0,17,165	0/0:27,0:27:69.19:0,69,786	0/0:17,0:17:48.14:0,48,554	0/0:11,0:11:30.09:0,30,346	0/0:36,0:36:51.82:0,52,761	0/0:22,0:22:63.15:0,63,712	0/0:22,0:22:60.17:0,60,678	0/0:15,0:15:36.11:0,36,416	1/1:1,15:16:33.02:301,33,0	0/0:8,0:8:15.53:0,16,204	0/0:16,0:16:42.11:0,42,472	0/0:17,0:17:48.14:0,48,554	0/0:17,1:18:11.65:0,12,388	0/0:27,0:27:72.21:0,72,831	0/0:20,0:20:51.15:0,51,589	0/0:19,0:19:45.13:0,45,520	0/0:16,0:16:36.09:0,36,402	0/0:14,0:13:33.10:0,33,381	0/0:18,0:18:42.12:0,42,485	1/1:3,15:18:27.01:246,27,0	1/1:3,23:26:54.02:494,54,0	0/0:25,0:25:71.56:0,72,792	0/0:34,0:34:81.22:0,81,918	0/0:23,0:23:66.20:0,66,759	0/0:9,0:9:27.08:0,27,312
chr10	38583267	.	CAT	C	200.55	PASS	AB=0.604;AC=5;AF=0.089;AN=56;BaseQRankSum=4.822;DP=644;FS=2.889;HRun=0;HaplotypeScore=132.3643;InbreedingCoeff=0.7963;MQ=69.54;MQ0=7;MQRankSum=-3.568;QD=3.13;ReadPosRankSum=-1.184;VQSLOD=2.1006;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:39:99:0,102,2068	0/0:5,0:5:15.05:0,15,304	0/0:10,0:7:9.69:0,10,164	0/0:32,0:21:20.89:0,21,440	0/0:19,0:19:48.13:0,48,893	0/0:22,0:22:66.21:0,66,1268	0/0:38,0:38:99:0,111,2240	0/0:23,0:23:63.22:0,63,1273	0/0:28,0:28:81.28:0,81,1592	0/0:26,0:26:78.24:0,78,1529	0/0:10,0:10:24.08:0,24,487	1/1:3,22:25:20.85:286,21,0	0/0:16,0:16:45.09:0,45,800	0/0:20,0:20:56.83:0,57,1024	0/0:16,0:16:48.16:0,48,973	0/0:16,0:16:44.99:0,45,741	0/0:33,0:33:95.02:0,95,1772	0/0:35,0:33:96.28:0,96,1868	0/0:22,0:22:66.22:0,66,1298	0/0:16,0:16:48.15:0,48,912	0/0:70,0:70:99:0,211,4064	0/0:10,0:10:24.08:0,24,487	1/1:1,9:10:2.50:19,2,0	0/1:10,19:29:0.44:0,0,1	0/0:8,0:8:24.08:0,24,471	0/0:24,0:23:72.22:0,72,1342	0/0:25,0:25:71.42:0,71,1327	0/0:13,0:13:39.09:0,39,709
chr10	38583298	.	ACG	A	1092.83	PASS	AB=0.944;AC=14;AF=0.250;AN=56;BaseQRankSum=3.747;DP=723;FS=0.000;HRun=0;HaplotypeScore=123.6659;InbreedingCoeff=-0.1697;MQ=58.42;MQ0=19;MQRankSum=1.482;QD=3.73;ReadPosRankSum=-5.748;VQSLOD=0.3508;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:39:32.26:0,32,561	0/1:2,0:2:14.31:19,0,14	0/0:24,1:7:11.82:0,12,133	0/1:44,0:15:13.59:14,0,111	0/1:16,1:17:99:148,0,101	0/0:18,0:18:49.14:0,49,731	0/0:40,0:40:26.56:0,27,1151	0/1:23,0:22:51.46:51,0,454	0/1:24,3:26:99:266,0,176	0/1:21,0:21:21.15:21,0,433	0/0:15,0:15:21.05:0,21,247	0/0:27,0:27:18.35:0,18,60	0/1:16,1:17:79.08:159,0,79	0/1:11,11:22:99:100,0,152	0/1:20,1:20:99:158,0,171	0/1:17,1:18:99:127,0,145	0/1:35,1:36:99:173,0,323	0/0:33,0:30:63.56:0,64,864	0/0:16,0:15:32.38:0,32,385	0/0:21,0:21:16.04:0,16,699	0/0:96,0:94:99:0,206,3429	0/0:13,0:13:32.98:0,33,434	1/1:11,0:11:0.47:1,0,0	0/1:34,0:33:0.40:0,0,1	0/0:13,0:12:29.82:0,30,456	0/0:32,0:31:11.03:0,11,1007	0/0:27,0:26:58.57:0,59,1022	0/0:14,0:14:41.90:0,42,601
chr10	38583300	.	G	GCA	2663.92	PASS	AB=0.883;AC=16;AF=0.286;AN=56;BaseQRankSum=-4.244;DP=729;FS=5.884;HRun=0;HaplotypeScore=122.3974;InbreedingCoeff=0.5536;MQ=58.50;MQ0=20;MQRankSum=-0.942;QD=9.90;ReadPosRankSum=0.864;VQSLOD=3.0472;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,24:38:37.01:573,37,0	0/0:2,0:2:2.68:0,3,11	0/0:27,0:8:9.02:0,9,97	0/1:43,0:15:11.68:12,0,67	0/0:19,0:19:5.86:0,6,147	0/0:17,0:19:1.74:0,2,400	0/0:33,0:41:71.36:0,71,732	0/0:21,0:21:7.16:0,7,256	0/1:26,0:25:1.06:1,0,226	1/1:9,13:22:42.14:617,42,0	0/1:2,13:16:17.60:220,0,18	1/1:27,0:27:27:241,27,0	0/1:18,0:18:37.67:38,0,115	0/0:22,0:22:33.49:0,33,222	0/0:21,0:20:37.92:0,38,249	0/0:18,0:18:28.89:0,29,202	0/0:36,0:36:62.65:0,63,427	1/1:12,21:30:39.44:1006,39,0	0/0:17,0:15:9.36:0,9,212	0/0:21,0:21:44.81:0,45,506	0/0:94,0:92:99:0,196,2198	0/0:13,0:13:24.07:0,24,278	1/1:10,0:11:2.99:24,3,0	1/1:34,0:33:11.83:113,12,0	0/0:13,0:13:30.04:0,30,328	0/0:26,0:31:52.97:0,53,660	0/0:23,0:26:53.99:0,54,610	0/0:15,0:15:24.07:0,24,284
chr10	38583312	.	A	ACACG	904.26	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=9.594;DP=742;FS=0.000;HRun=0;HaplotypeScore=147.5554;InbreedingCoeff=0.6566;MQ=58.26;MQ0=15;MQRankSum=-0.806;QD=7.80;ReadPosRankSum=5.489;VQSLOD=2.3877;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:37,0:36:15.47:15,0,89	0/0:3,0:3:6.01:0,6,61	0/0:32,0:11:23.54:0,24,228	0/0:45,0:16:29.25:0,29,325	0/0:19,0:19:42.01:0,42,560	0/0:22,0:22:52.37:0,52,801	0/0:38,0:38:99:0,105,1506	0/0:24,0:24:59.67:0,60,734	0/0:22,0:21:52.95:0,53,821	0/0:19,0:19:9.44:0,9,89	0/0:17,0:17:0.51:0,1,71	1/1:4,27:32:26.79:670,27,0	0/0:20,0:20:49.94:0,50,585	0/0:30,0:30:63.06:0,63,806	0/0:22,0:21:54.10:0,54,787	0/0:17,0:17:48.07:0,48,675	0/0:34,0:34:57.44:0,57,1192	0/0:38,0:35:17.04:0,17,273	0/0:17,0:15:35.15:0,35,519	0/0:25,0:25:75.11:0,75,1060	0/0:87,0:86:99:0,247,3955	0/0:12,0:12:27.08:0,27,463	1/1:3,7:12:2.60:80,3,0	1/1:9,24:34:11.70:272,12,0	0/0:16,0:15:38.90:0,39,621	0/0:31,0:31:86.17:0,86,1288	0/0:24,0:23:60.17:0,60,1020	0/0:12,0:12:36.03:0,36,545
chr10	38583516	.	GT	G	4560.13	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=11.291;DP=572;FS=1.565;HRun=9;HaplotypeScore=63.1691;InbreedingCoeff=0.9752;MQ=70.13;MQ0=3;MQRankSum=0.214;QD=22.03;ReadPosRankSum=4.152;VQSLOD=5.6296;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,19:22:45.02:411,45,0	1/1:1,7:8:20.96:184,21,0	0/0:26,0:18:12.56:0,13,154	0/0:34,2:18:4.44:0,4,228	1/1:4,27:31:75.02:685,75,0	0/0:28,0:28:81.18:0,81,894	0/0:20,0:20:48.12:0,48,533	0/0:38,0:38:81.19:0,81,897	1/1:1,10:11:20.93:192,21,0	1/1:5,13:18:39.02:357,39,0	1/1:0,18:18:54.03:494,54,0	0/0:13,0:14:32.91:0,33,351	1/1:1,18:19:47.94:439,48,0	1/1:1,9:10:24.01:220,24,0	1/1:0,15:15:36.02:329,36,0	1/1:2,11:13:33.01:302,33,0	1/1:2,21:23:46.83:508,47,0	1/1:1,18:19:48.02:439,48,0	0/0:26,0:26:69.18:0,69,776	0/0:16,0:16:48.14:0,48,554	0/0:12,0:12:36.11:0,36,415	0/0:18,0:18:54.16:0,54,623	0/0:19,0:19:54.14:0,54,604	0/0:10,0:10:27.08:0,27,312	0/0:18,0:18:42.12:0,42,483	0/0:24,1:25:38.74:0,39,691	0/0:36,0:36:99:0,99,1131	0/0:23,0:23:63.16:0,63,705
chr10	38583781	.	T	TAAAA	10490.62	PASS	AB=0.817;AC=30;AF=0.536;AN=56;BaseQRankSum=4.936;DP=569;FS=1.160;HRun=10;HaplotypeScore=112.1560;InbreedingCoeff=0.9134;MQ=77.88;MQ0=0;MQRankSum=-6.430;QD=32.48;ReadPosRankSum=-2.283;VQSLOD=3.1755;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,1:31:69.09:852,69,0	1/1:0,5:6:18.06:391,18,0	0/0:26,0:20:16.49:0,16,275	0/1:16,0:16:1.65:2,0,124	1/1:11,21:37:65.85:1247,66,0	0/0:24,0:24:66.17:0,66,914	0/0:16,0:16:45.13:0,45,636	0/0:25,0:26:53.95:0,54,723	1/1:8,9:19:30.10:668,30,0	1/1:9,0:27:57.14:723,57,0	1/1:6,0:23:48.89:567,49,0	1/1:5,0:19:42.13:524,42,0	1/1:3,14:18:36.12:816,36,0	1/1:4,17:23:45.15:1019,45,0	1/1:9,4:16:39.13:692,39,0	1/1:6,13:21:54.18:1192,54,0	1/1:9,10:21:33.58:758,34,0	0/1:8,1:19:0.18:386,0,0	0/0:21,0:22:44.15:0,44,559	0/0:30,0:30:69.15:0,69,956	0/0:13,0:13:27.02:0,27,364	0/0:14,0:15:42.11:0,42,559	1/1:4,1:20:39.04:505,39,0	1/1:2,0:7:12.04:150,12,0	0/0:17,0:17:48.11:0,48,660	0/0:25,0:26:63.11:0,63,871	0/0:18,0:18:48.12:0,48,660	0/0:13,0:13:30.06:0,30,425
chr10	38584902	.	T	TCA	1942.56	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-0.958;DP=624;FS=6.608;HRun=0;HaplotypeScore=74.3821;InbreedingCoeff=0.9992;MQ=85.31;MQ0=0;MQRankSum=-0.460;QD=43.17;ReadPosRankSum=1.265;VQSLOD=5.2078;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:37:99:0,111,1687	0/0:9,0:9:27.09:0,27,412	0/0:24,0:24:68.69:0,69,943	0/0:27,0:27:78.26:0,78,1126	0/0:20,0:20:60.19:0,60,896	0/0:28,0:28:84.27:0,84,1263	0/0:21,0:21:60.17:0,60,874	0/0:32,0:31:90.26:0,90,1335	0/0:31,0:31:90.29:0,90,1351	0/0:30,0:30:84.24:0,84,1240	0/0:17,0:17:45.14:0,45,669	1/1:0,13:14:30.10:579,30,0	0/0:18,0:18:54.16:0,54,785	0/0:15,0:15:45.15:0,45,689	0/0:20,0:20:60.20:0,60,917	0/0:19,0:19:57.18:0,57,851	0/0:26,0:24:66.21:0,66,983	0/0:16,0:16:48.16:0,48,735	0/0:16,0:16:45.14:0,45,664	0/0:21,0:21:63.19:0,63,919	0/0:53,0:53:99:0,160,2422	0/0:21,0:21:60.17:0,60,894	1/1:1,17:18:48.16:927,48,0	1/1:1,12:13:30.10:579,30,0	0/0:19,0:19:54.18:0,54,815	0/0:24,0:24:66.22:0,66,989	0/0:23,0:23:69.23:0,69,1053	0/0:11,0:11:33.11:0,33,505
chr10	38586380	.	C	CTG	1084.65	PASS	AB=0.914;AC=25;AF=0.500;AN=50;BaseQRankSum=-5.872;DP=701;FS=9.860;HRun=0;HaplotypeScore=105.4233;InbreedingCoeff=0.3078;MQ=71.43;MQ0=19;MQRankSum=2.175;QD=3.09;ReadPosRankSum=-4.100;VQSLOD=-0.4086;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:47:7.28:0,7,49	0/0:7,0:7:2.03:0,2,6	./.	./.	0/1:11,0:14:9.05:9,0,19	1/1:5,2:7:3.01:45,3,0	1/1:22,9:30:21.07:310,21,0	1/1:27,0:26:0.47:1,0,0	./.	0/0:17,0:27:11.28:0,11,56	0/0:5,0:13:1.55:0,2,4	1/1:18,7:26:6.02:89,6,0	0/0:16,0:19:8.68:0,9,54	0/0:24,0:26:2.84:0,3,14	0/0:16,0:24:17.08:0,17,86	0/0:8,0:19:19.88:0,20,98	0/1:23,0:31:6.68:7,0,52	0/0:14,0:19:2.84:0,3,14	0/0:22,0:22:0.88:0,1,2	0/1:15,0:15:17.96:18,0,27	1/1:63,0:61:16.32:176,16,0	1/1:15,6:21:3.01:45,3,0	1/1:13,2:14:2.48:112,2,0	0/1:16,8:23:2.66:80,0,3	1/1:9,4:13:3.01:44,3,0	1/1:16,7:23:20.93:217,21,0	0/1:14,4:18:26.48:38,0,26	1/1:18,2:20:3.01:45,3,0
chr10	38586712	.	CA	C	6772.25	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=18.521;DP=679;FS=1.020;HRun=2;HaplotypeScore=93.0964;InbreedingCoeff=0.9996;MQ=95.51;MQ0=0;MQRankSum=-1.920;QD=35.09;ReadPosRankSum=3.598;VQSLOD=5.1803;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,105,1571	1/1:0,10:10:27.09:348,27,0	0/0:33,0:33:94.61:0,95,1307	0/0:31,0:31:81.23:0,81,1157	1/1:1,17:18:39.13:506,39,0	0/0:20,0:20:60.19:0,60,878	0/0:29,0:29:87.29:0,87,1297	0/0:25,0:25:75.25:0,75,1106	1/1:1,27:28:81.26:1052,81,0	0/0:19,0:19:57.19:0,57,837	0/0:18,0:18:48.08:0,48,669	0/0:25,0:25:75.25:0,75,1121	1/1:0,19:19:51.17:662,51,0	1/1:1,21:22:57.18:738,57,0	1/1:0,36:36:93.30:1208,93,0	1/1:0,34:34:99:1324,102,0	1/1:1,25:26:72.23:934,72,0	0/0:21,0:21:63.21:0,63,944	0/0:21,0:21:63.21:0,63,944	0/0:26,0:26:75.25:0,75,1122	0/0:47,0:47:99:0,141,2066	0/0:22,0:22:60.20:0,60,880	0/0:9,0:9:27.09:0,27,404	0/0:23,0:22:66.14:0,66,936	0/0:15,0:15:42.14:0,42,628	0/0:27,0:27:78.26:0,78,1169	0/0:25,0:25:75.23:0,75,1077	0/0:14,0:14:42.14:0,42,626
chr10	38586960	.	GACT	G	373.86	PASS	AB=0.876;AC=9;AF=0.161;AN=56;BaseQRankSum=4.099;DP=644;FS=43.363;HRun=0;HaplotypeScore=149.9344;InbreedingCoeff=-0.2006;MQ=67.46;MQ0=26;MQRankSum=-3.294;QD=1.95;ReadPosRankSum=-2.586;VQSLOD=0.6163;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,6:28:62.24:0,62,1232	0/1:13,4:16:13.42:13,0,630	0/0:38,1:20:1.79:0,2,1184	0/0:43,0:29:62.98:0,63,1638	0/1:14,2:16:47.79:48,0,503	0/0:21,0:21:60.07:0,60,1161	0/0:22,0:22:63.05:0,63,1185	0/0:33,1:33:35.09:0,35,1989	0/1:18,4:18:4.63:5,0,1014	0/1:18,4:21:89.57:90,0,1080	0/0:7,6:13:18.06:0,18,369	0/0:15,0:16:38.86:0,39,690	0/0:19,0:19:6.41:0,6,909	0/0:12,6:16:33.11:0,33,695	0/1:17,3:19:7.10:7,0,662	0/0:14,3:17:38.39:0,38,842	0/0:32,0:32:56.59:0,57,1775	0/1:11,6:17:99:196,0,652	0/0:31,0:29:87.28:0,87,2021	0/0:24,0:25:19.63:0,20,1138	0/1:37,0:37:9.79:10,0,1762	0/0:18,1:19:6.13:0,6,835	0/0:13,0:13:30.10:0,30,698	0/0:28,0:27:2.12:0,2,697	0/0:18,0:18:48.16:0,48,982	0/1:16,0:17:99:129,0,709	0/1:22,1:22:3.87:4,0,775	0/0:7,0:7:18.06:0,18,404
chr10	38586963	.	T	TTGTGTGTG	8774.89	PASS	AB=1.000;AC=46;AF=0.852;AN=54;BaseQRankSum=-3.586;DP=716;FS=7.968;HRun=0;HaplotypeScore=204.6318;InbreedingCoeff=0.3759;MQ=60.93;MQ0=29;MQRankSum=-4.711;QD=13.73;ReadPosRankSum=-0.967;VQSLOD=2.7180;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:36,0:32:5.99:66,6,0	1/1:15,0:16:2.99:96,3,0	0/1:39,0:18:40.38:40,0,132	0/1:45,0:27:19.56:20,0,46	1/1:13,0:15:6.49:145,6,0	0/0:10,0:23:37.92:0,38,324	0/0:8,0:23:38.59:0,39,205	1/1:40,0:38:35.31:811,35,0	1/1:23,0:19:8.95:189,9,0	1/1:25,0:24:19.61:311,20,0	0/0:12,0:11:0:0,0,0	1/1:12,1:22:21.07:664,21,0	1/1:20,0:27:2.92:105,3,0	1/1:18,0:16:3.01:44,3,0	1/1:19,0:21:9.03:158,9,0	./.	1/1:31,0:31:4.60:107,5,0	1/1:19,0:19:21.04:351,21,0	1/1:26,8:35:39.10:954,39,0	1/1:16,6:29:27.09:905,27,0	1/1:38,0:44:21.07:622,21,0	1/1:13,6:22:17.85:598,18,0	1/1:11,0:19:6.02:142,6,0	1/1:26,2:33:9.97:314,10,0	1/1:14,5:20:12.04:496,12,0	1/1:13,1:17:27.08:647,27,0	1/1:13,10:25:24.08:868,24,0	1/1:5,2:7:3.01:124,3,0
chr10	38588019	.	TGG	T	760.51	PASS	AB=0.622;AC=29;AF=0.690;AN=42;BaseQRankSum=1.632;DP=101;FS=2.825;HRun=7;HaplotypeScore=48.2609;InbreedingCoeff=0.3667;MQ=107.01;MQ0=0;MQRankSum=-4.187;QD=12.47;ReadPosRankSum=2.857;VQSLOD=-0.3411;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,0:1:2.88:15,3,0	./.	0/0:13,0:6:7.62:0,8,117	0/0:14,0:13:18.41:0,18,167	./.	0/0:1,0:2:2.37:0,2,8	0/1:4,0:7:13.05:13,0,30	1/1:1,4:5:11.83:124,12,0	0/0:0,0:1:0.47:0,0,1	0/1:0,0:1:0:0,0,0	1/1:2,0:2:2.90:16,3,0	1/1:1,5:6:15.02:155,15,0	./.	./.	0/1:1,0:2:3.15:11,0,3	./.	0/0:3,0:4:5.91:0,6,39	./.	1/1:3,3:6:9.02:103,9,0	1/1:1,1:2:3.01:32,3,0	1/1:4,1:5:9.03:112,9,0	./.	1/1:1,6:7:6.02:73,6,0	1/1:4,1:5:3.47:28,3,0	1/1:1,3:4:9.03:107,9,0	1/1:2,2:4:3.01:36,3,0	1/1:0,2:2:3:29,3,0	1/1:0,1:1:3.01:33,3,0
chr10	38588022	.	G	GGGT	769.14	PASS	AC=22;AF=0.524;AN=42;BaseQRankSum=0.498;DP=95;FS=2.446;HRun=0;HaplotypeScore=51.4526;InbreedingCoeff=0.5611;MQ=105.78;MQ0=0;MQRankSum=-4.401;QD=17.09;ReadPosRankSum=2.131;VQSLOD=3.3631;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:2,0:1:1.25:0,1,3	./.	0/0:12,0:5:14.69:0,15,118	0/0:16,0:13:24.41:0,24,218	./.	0/0:2,0:2:2.37:0,2,8	0/0:6,0:6:4.64:0,5,59	1/1:6,1:7:17.75:191,18,0	0/0:1,0:1:1.55:0,2,4	0/0:1,0:1:0.47:0,0,1	0/0:1,0:1:0.89:0,1,2	1/1:5,0:5:14.89:145,15,0	./.	./.	0/0:2,0:2:3.26:0,3,10	./.	0/0:5,0:5:8.88:0,9,64	./.	1/1:5,1:6:9.02:127,9,0	1/1:1,0:1:2.80:13,3,0	1/1:5,0:5:9.02:104,9,0	./.	1/1:7,1:8:6:57,6,0	1/1:3,1:4:6:73,6,0	1/1:4,0:4:9.02:93,9,0	1/1:2,0:2:3.01:31,3,0	1/1:2,0:2:2.92:17,3,0	1/1:1,0:1:3.01:56,3,0
chr10	38588031	.	GGC	G	1171.29	PASS	AB=1.000;AC=37;AF=0.881;AN=42;BaseQRankSum=-2.167;DP=82;FS=1.288;HRun=0;HaplotypeScore=39.5655;InbreedingCoeff=0.1618;MQ=107.78;MQ0=0;MQRankSum=-4.224;QD=18.89;ReadPosRankSum=0.907;VQSLOD=3.5438;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,0:2:3:29,3,0	1/1:1,0:1:2.97:20,3,0	0/1:12,0:5:30.78:31,0,100	0/0:15,0:12:10.44:0,10,221	./.	./.	1/1:3,0:3:6.01:59,6,0	1/1:1,5:6:15:208,15,0	./.	0/0:2,0:2:1.89:0,2,7	1/1:2,0:2:3.01:30,3,0	1/1:0,5:5:15.05:214,15,0	./.	./.	1/1:1,0:1:3.01:32,3,0	./.	1/1:2,0:2:3.44:21,3,0	./.	1/1:1,2:3:8.99:106,9,0	1/1:1,0:1:3.01:32,3,0	1/1:1,2:3:3.01:46,3,0	1/1:1,0:1:2.96:19,3,0	1/1:0,6:6:6.02:92,6,0	1/1:1,1:2:3.01:39,3,0	1/1:0,4:4:9.03:132,9,0	1/1:2,0:2:5.98:63,6,0	1/1:0,2:2:3.01:42,3,0	1/1:2,1:3:5.98:64,6,0
chr10	38588032	.	GC	G	747.35	PASS	AB=0.933;AC=39;AF=0.929;AN=42;BaseQRankSum=-1.426;DP=77;FS=0.000;HRun=1;HaplotypeScore=41.2778;InbreedingCoeff=0.0118;MQ=107.23;MQ0=0;MQRankSum=-3.942;QD=11.68;ReadPosRankSum=0.467;VQSLOD=1.6657;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,2:2:3.01:37,3,0	1/1:1,0:1:2.97:20,3,0	0/0:12,0:5:2.35:0,2,80	0/1:13,1:11:20.67:21,0,150	./.	./.	1/1:0,2:2:6.02:71,6,0	1/1:6,0:6:14.62:86,15,0	./.	1/1:0,2:2:3.47:26,3,0	1/1:0,2:2:3.01:34,3,0	1/1:5,0:5:14.85:109,15,0	./.	./.	1/1:0,1:1:3.01:36,3,0	./.	1/1:0,2:2:6.01:59,6,0	./.	1/1:3,0:3:8.78:54,9,0	1/1:0,1:1:3:25,3,0	1/1:3,0:3:2.96:19,3,0	1/1:1,0:1:2.96:19,3,0	1/1:6,0:6:5.92:40,6,0	1/1:2,0:2:2.98:21,3,0	1/1:4,0:4:8.87:61,9,0	1/1:1,1:2:5.93:40,6,0	1/1:2,0:2:3.01:30,3,0	1/1:3,0:3:5.87:36,6,0
chr10	38588039	.	TG	T	983.57	PASS	AC=34;AF=0.895;AN=38;BaseQRankSum=-2.767;DP=86;FS=1.882;HRun=7;HaplotypeScore=44.1012;InbreedingCoeff=0.2311;MQ=110.15;MQ0=0;MQRankSum=-1.789;QD=14.68;ReadPosRankSum=0.371;VQSLOD=2.7966;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,2:2:2.90:16,3,0	1/1:0,1:1:3.01:30,3,0	1/1:14,0:7:4.70:38,5,0	0/0:13,0:11:5.87:0,6,96	./.	./.	./.	1/1:1,6:7:18.04:182,18,0	./.	1/1:2,1:3:5.89:41,6,0	./.	1/1:1,5:6:14.98:133,15,0	./.	./.	1/1:1,0:1:2.99:24,3,0	./.	1/1:0,2:2:5.89:39,6,0	./.	1/1:1,6:7:17.89:150,18,0	1/1:2,0:2:5.98:47,6,0	1/1:0,3:3:3.01:30,3,0	1/1:0,1:1:3.01:30,3,0	1/1:1,5:6:9.01:88,9,0	0/0:0,2:2:0:0,0,0	1/1:2,3:5:9.01:84,9,0	1/1:1,1:2:6.01:58,6,0	1/1:1,1:2:3:27,3,0	1/1:1,2:3:6.01:56,6,0
chr10	38588883	.	GAGA	G	12534.86	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=15.414;DP=736;FS=10.967;HRun=0;HaplotypeScore=116.2537;InbreedingCoeff=0.9975;MQ=84.85;MQ0=0;MQRankSum=-6.301;QD=41.23;ReadPosRankSum=2.265;VQSLOD=5.7234;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,123,2789	0/0:8,0:8:24.08:0,24,551	0/0:27,0:27:75.24:0,75,1570	0/0:30,0:30:81.16:0,81,1552	0/0:18,0:18:42.13:0,42,922	0/0:25,0:25:75.22:0,75,1600	0/0:41,0:41:99:0,123,2712	1/1:4,27:31:81.11:1161,81,0	0/0:35,0:35:96.32:0,96,2133	0/0:23,0:23:69.24:0,69,1567	0/0:14,0:14:39.13:0,39,853	1/1:1,30:31:84.28:1390,84,0	0/0:26,0:26:78.27:0,78,1766	0/0:31,0:31:90.30:0,90,2010	0/0:28,0:28:78.22:0,78,1703	0/0:25,0:25:72.22:0,72,1549	0/0:31,0:31:87.28:0,87,1924	0/0:28,0:28:81.26:0,81,1795	1/1:0,19:19:54.18:886,54,0	1/1:2,25:27:62.95:1073,63,0	1/1:1,52:53:99:2095,126,0	1/1:0,21:21:48.16:758,48,0	1/1:1,19:20:51.64:823,52,0	1/1:3,31:34:84.29:1418,84,0	1/1:1,19:20:45.15:739,45,0	1/1:0,29:29:84.24:1336,84,0	1/1:0,14:14:36.12:599,36,0	1/1:0,5:5:15.05:256,15,0
chr10	38589148	.	A	AGGG	2314.46	PASS	AB=0.685;AC=36;AF=0.643;AN=56;BaseQRankSum=9.922;DP=556;FS=2.676;HRun=8;HaplotypeScore=112.1393;InbreedingCoeff=0.5473;MQ=86.74;MQ0=0;MQRankSum=-3.019;QD=6.36;ReadPosRankSum=1.353;VQSLOD=-0.5414;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:51:99:0,126,1603	0/0:3,0:7:1.68:0,2,71	0/1:22,0:21:8.13:8,0,514	0/0:22,0:22:39.06:0,39,479	1/1:3,0:16:15.07:47,15,0	0/0:19,0:19:33.05:0,33,433	0/0:33,0:33:79.69:0,80,1044	1/1:8,2:14:20.80:264,21,0	1/1:4,0:26:24.92:54,25,0	0/0:19,0:19:48.09:0,48,610	0/0:8,0:8:12.01:0,12,158	1/1:14,2:17:30.05:418,30,0	1/1:2,0:21:24.56:54,25,0	0/1:4,0:26:11.50:26,0,12	1/1:3,0:12:8.72:19,9,0	0/1:1,0:13:14.47:14,0,21	1/1:6,0:26:4.42:30,4,0	0/0:33,0:33:69.16:0,69,906	1/1:8,4:14:23.93:292,24,0	1/1:10,1:12:3.01:61,3,0	1/1:19,15:43:14.73:189,15,0	1/1:6,7:15:9.01:144,9,0	1/1:7,0:12:2.99:23,3,0	1/1:5,6:19:20.97:288,21,0	1/1:8,3:14:3.01:61,3,0	0/1:11,6:21:18.26:263,0,18	1/1:3,2:11:9.01:144,9,0	1/1:3,1:10:10.23:109,10,0
chr10	38595858	.	C	CT	6570.71	PASS	AB=1.000;AC=25;AF=0.446;AN=56;BaseQRankSum=-12.076;DP=498;FS=4.088;HRun=7;HaplotypeScore=40.3025;InbreedingCoeff=0.9160;MQ=57.08;MQ0=9;MQRankSum=-1.075;QD=26.71;ReadPosRankSum=1.398;VQSLOD=5.3101;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:48.07:0,48,463	0/0:6,0:5:15.02:0,15,145	0/1:7,0:4:5.96:6,0,23	0/0:8,0:8:20.70:0,21,185	0/0:26,0:26:75.12:0,75,724	0/0:20,0:20:42.06:0,42,405	0/0:14,0:14:33.05:0,33,318	1/1:6,27:33:84.26:1014,84,0	0/0:20,0:20:39.06:0,39,375	0/0:21,0:21:45.06:0,45,431	0/0:20,0:20:60.09:0,60,578	1/1:2,12:14:15.05:181,15,0	0/0:19,0:18:45.07:0,45,433	0/0:12,0:12:24.04:0,24,230	0/0:19,0:19:48.08:0,48,463	0/0:6,0:6:9.01:0,9,87	0/0:28,0:26:60.07:0,60,570	0/0:11,0:11:28.29:0,28,263	1/1:3,18:20:51.16:616,51,0	1/1:6,16:22:39.12:471,39,0	1/1:3,7:9:12.04:145,12,0	1/1:0,8:8:21.06:254,21,0	1/1:2,23:25:66.20:797,66,0	1/1:3,3:6:9.03:109,9,0	1/1:2,13:14:33.10:399,33,0	1/1:4,21:25:40.23:768,40,0	1/1:2,39:41:99:1304,108,0	1/1:5,14:17:42.13:507,42,0
chr10	38599479	.	GT	G	1061.09	PASS	AC=22;AF=0.846;AN=26;BaseQRankSum=-4.871;DP=164;FS=28.346;HRun=5;HaplotypeScore=72.2375;InbreedingCoeff=0.6409;MQ=138.70;MQ0=17;MQRankSum=-6.558;QD=24.68;ReadPosRankSum=5.083;VQSLOD=1.8693;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:66,0:42:99:0,123,1606	0/0:52,0:17:46.05:0,46,619	./.	1/1:0,4:4:12.03:136,12,0	./.	1/1:1,2:2:6.02:68,6,0	1/1:0,2:2:6.02:68,6,0	./.	./.	1/1:0,2:2:6.02:68,6,0	1/1:0,5:5:15.03:161,15,0	1/1:0,4:4:9.02:94,9,0	1/1:1,2:1:3.01:34,3,0	./.	./.	./.	1/1:2,1:2:3.01:34,3,0	1/1:1,5:4:12.03:136,12,0	./.	./.	./.	./.	./.	1/1:0,5:5:15.04:170,15,0	1/1:0,6:6:18.05:204,18,0	./.
chr10	38604293	.	TACACACACACACACACACACAC	T	2145.19	PASS	AB=0.861;AC=8;AF=0.143;AN=56;BaseQRankSum=1.733;DP=564;FS=0.874;HRun=0;HaplotypeScore=304.8574;InbreedingCoeff=0.5462;MQ=64.88;MQ0=14;MQRankSum=-6.116;QD=17.03;ReadPosRankSum=-1.380;VQSLOD=1.5225;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:26,14:40:12.56:396,13,0	0/0:4,0:4:9.03:0,9,202	0/1:30,0:15:14.80:15,0,151	0/0:38,0:23:21.07:0,21,583	0/0:14,0:13:6.02:0,6,172	0/0:10,0:10:15.05:0,15,840	0/0:17,0:23:31.71:0,32,1843	0/0:27,0:27:33.11:0,33,1214	0/0:18,0:18:16.46:0,16,524	1/1:18,3:20:39.13:1415,39,0	1/1:3,6:9:0.94:2,1,0	0/0:15,0:15:35.16:0,35,2850	0/0:31,0:31:68.25:0,68,3733	0/0:22,0:22:25.72:0,26,808	0/0:18,0:18:16.67:0,17,533	0/0:16,0:15:6.24:0,6,238	0/0:25,0:24:46.40:0,46,1729	0/1:16,10:25:29.98:449,0,30	0/0:14,0:14:24.08:0,24,1354	0/0:13,0:13:27.09:0,27,1599	0/0:58,0:58:99:0,108,5646	0/0:12,0:12:21.07:0,21,1438	0/0:13,0:13:21.07:0,21,1169	0/0:23,0:23:36.12:0,36,2502	0/0:5,0:5:15.05:0,15,958	0/0:21,0:21:36.12:0,36,2036	0/0:10,0:10:21.07:0,21,925	0/0:8,0:7:15.05:0,15,804
chr10	38604350	.	GCA	G	2876.59	PASS	AB=0.889;AC=19;AF=0.339;AN=56;BaseQRankSum=11.420;DP=685;FS=0.895;HRun=0;HaplotypeScore=152.2949;InbreedingCoeff=0.6939;MQ=56.39;MQ0=15;MQRankSum=-7.975;QD=13.20;ReadPosRankSum=3.026;VQSLOD=3.5538;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:51.53:0,52,794	1/1:2,3:5:5.99:70,6,0	0/0:45,0:21:42.71:0,43,798	0/0:56,0:26:56.96:0,57,858	1/1:6,13:17:6.02:76,6,0	0/0:14,0:14:42.14:0,42,678	0/0:18,0:18:42.10:0,42,625	0/0:23,0:21:51.16:0,51,790	1/1:2,17:19:27.09:342,27,0	0/1:16,2:18:30.26:30,0,578	0/1:10,2:12:20.56:21,0,233	0/0:30,1:31:43.15:0,43,1212	1/1:10,16:24:47.40:577,47,0	1/1:8,24:32:38.77:495,39,0	1/1:4,26:30:45.44:572,45,0	1/1:7,16:22:29.99:381,30,0	1/1:8,16:23:41.34:501,41,0	0/0:19,0:19:36.12:0,36,577	0/0:34,0:32:87.18:0,87,1286	0/0:14,1:15:0.92:0,1,513	0/0:74,1:74:99:0,124,2482	0/0:16,0:15:39.12:0,39,606	0/1:9,1:10:11.61:12,0,308	0/0:23,0:23:57.17:0,57,908	0/0:18,1:19:12.90:0,13,729	0/0:19,0:19:47.30:0,47,705	0/0:11,0:10:24.05:0,24,351	0/0:9,0:8:18.06:0,18,301
chr10	38605922	.	CAA	C	1239.95	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=1.596;DP=512;FS=6.597;HRun=13;HaplotypeScore=100.4786;InbreedingCoeff=0.7837;MQ=57.00;MQ0=27;MQRankSum=-1.559;QD=11.92;ReadPosRankSum=0.612;VQSLOD=2.5385;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:13,21:34:64.01:586,64,0	0/0:11,0:11:24.08:0,24,338	0/0:21,0:8:6.03:0,6,122	0/0:20,0:11:10.46:0,10,124	0/0:21,1:23:22.06:0,22,636	0/0:3,0:17:29.21:0,29,98	0/0:7,0:17:27.05:0,27,93	0/1:15,0:13:1.58:2,0,165	0/0:17,0:16:45.14:0,45,632	1/1:4,14:15:35.60:305,36,0	1/1:5,12:13:27.03:262,27,0	0/0:13,0:13:22.15:0,22,192	0/0:11,0:11:30.10:0,30,434	0/0:13,0:12:24.05:0,24,319	0/0:14,0:14:33.11:0,33,478	0/0:18,0:18:26.23:0,26,408	0/0:29,0:29:62.69:0,63,855	1/1:9,9:17:5.55:237,6,0	0/0:21,0:17:1.60:0,2,238	0/0:20,0:19:22.62:0,23,210	0/0:15,0:15:32.96:0,33,275	0/0:13,0:13:16.27:0,16,158	0/0:16,0:14:11.82:0,12,120	0/0:11,0:10:14.92:0,15,146	0/0:23,0:22:44.91:0,45,369	0/0:28,0:25:39.02:0,39,365	0/0:16,0:15:32.33:0,32,274	0/0:13,0:10:17.98:0,18,149
chr10	38605931	.	A	AAT	6447.11	PASS	AB=1.000;AC=25;AF=0.446;AN=56;BaseQRankSum=2.202;DP=518;FS=1.685;HRun=0;HaplotypeScore=93.3752;InbreedingCoeff=0.9293;MQ=65.02;MQ0=22;MQRankSum=-3.214;QD=27.43;ReadPosRankSum=-1.243;VQSLOD=5.8422;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:35:77.53:0,78,550	0/0:9,0:9:24.04:0,24,313	0/1:28,0:11:7.28:7,0,149	0/0:27,0:16:13:0,13,201	0/0:22,0:20:53.72:0,54,660	0/0:19,0:18:43.47:0,43,350	0/0:15,0:15:38.89:0,39,314	1/1:3,14:18:53.86:658,54,0	0/0:16,0:15:42.13:0,42,571	0/0:23,0:20:53.74:0,54,413	0/0:17,0:13:32.88:0,33,253	1/1:4,8:13:29.86:436,30,0	0/0:11,0:11:33.10:0,33,438	0/0:11,0:10:23.98:0,24,305	0/0:16,0:16:45.11:0,45,564	0/0:15,0:15:42.97:0,43,496	0/0:30,0:27:68.98:0,69,875	0/0:15,0:13:32.46:0,32,235	1/1:5,14:20:50.03:665,50,0	1/1:3,15:17:35.88:515,36,0	1/1:1,13:14:33.09:535,33,0	1/1:3,12:15:27.78:365,28,0	1/1:3,8:13:12.11:278,12,0	1/1:3,8:12:32.92:450,33,0	1/1:1,16:19:44.75:641,45,0	1/1:4,24:28:84.05:1050,84,0	1/1:2,17:19:35.99:554,36,0	1/1:4,7:8:18.03:291,18,0
chr10	38606043	.	GGAT	G	2948.89	PASS	AB=0.960;AC=17;AF=0.327;AN=52;BaseQRankSum=9.580;DP=689;FS=10.634;HRun=0;HaplotypeScore=115.0146;InbreedingCoeff=-0.0154;MQ=41.81;MQ0=175;MQRankSum=0.865;QD=8.35;ReadPosRankSum=-2.879;VQSLOD=1.7756;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:32,0:26:94.38:250,0,94	0/0:14,0:11:0.47:0,0,269	./.	./.	0/0:18,0:14:39.13:0,39,582	0/0:27,0:27:61.70:0,62,894	0/0:40,0:22:54.84:0,55,739	0/0:29,0:16:48.14:0,48,540	0/0:45,0:30:75.24:0,75,959	0/1:39,0:19:99:186,0,185	1/1:11,0:7:4.56:47,5,0	0/1:19,0:13:99:267,0,177	0/0:34,0:27:19.49:0,19,918	0/0:24,0:18:6.62:0,7,533	0/1:21,3:21:69.94:70,0,483	0/0:28,0:22:50.19:0,50,680	0/0:33,0:27:58.89:0,59,908	0/1:22,0:21:18.83:186,0,19	0/1:15,0:10:47.27:47,0,158	1/1:14,2:11:26.81:306,27,0	0/1:53,5:43:99:300,0,255	0/1:20,0:6:54.32:74,0,54	0/0:14,0:7:18.06:0,18,227	0/0:28,0:26:8.10:0,8,560	0/1:22,3:18:16.93:311,0,17	0/1:31,3:18:59.62:450,0,60	1/1:22,0:18:14.29:402,14,0	0/1:15,1:11:5.89:215,0,6
chr10	38606046	.	T	TG	2929.03	PASS	AB=0.890;AC=18;AF=0.346;AN=52;BaseQRankSum=9.625;DP=684;FS=10.505;HRun=1;HaplotypeScore=104.4910;InbreedingCoeff=0.0693;MQ=41.76;MQ0=171;MQRankSum=0.505;QD=8.30;ReadPosRankSum=-2.419;VQSLOD=-0.5573;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:20,6:28:91.90:250,0,92	0/0:13,0:10:3.32:0,3,282	./.	./.	0/0:18,0:14:39.13:0,39,506	0/0:27,0:27:61.33:0,61,869	0/0:40,1:23:49.30:0,49,723	0/0:28,0:16:48.12:0,48,523	0/0:44,0:29:78.23:0,78,974	0/1:28,5:20:99:164,0,182	1/1:4,3:5:4.56:47,5,0	0/1:14,7:15:99:257,0,141	0/0:34,0:27:23.18:0,23,865	0/0:24,0:18:7.49:0,7,481	0/1:24,0:21:69.96:70,0,439	0/0:27,0:21:53.19:0,53,653	0/0:32,0:26:58.87:0,59,829	0/1:13,5:19:4.81:195,0,5	0/1:13,1:9:45.80:46,0,150	1/1:12,5:12:28.61:316,29,0	0/1:57,1:43:99:299,0,260	0/1:18,2:6:50:73,0,50	0/0:15,0:7:18.06:0,18,226	0/0:25,2:26:9.52:0,10,551	1/1:23,4:20:0.25:325,0,0	0/1:27,7:18:45.76:444,0,46	1/1:18,4:18:14.28:392,14,0	0/1:14,0:11:8.65:216,0,9
chr10	38606061	.	TG	T	1530.13	PASS	AB=0.865;AC=15;AF=0.278;AN=54;BaseQRankSum=3.018;DP=672;FS=6.454;HRun=2;HaplotypeScore=100.2004;InbreedingCoeff=-0.3849;MQ=40.99;MQ0=171;MQRankSum=-4.038;QD=4.26;ReadPosRankSum=-0.008;VQSLOD=0.2835;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,1:28:10.09:0,10,288	0/0:11,0:8:18.06:0,18,265	./.	0/0:7,0:3:0.82:0,1,69	0/0:14,0:10:27.09:0,27,402	0/0:23,0:23:60.18:0,60,860	0/0:41,0:23:57.06:0,57,861	0/1:31,0:17:14.49:14,0,568	0/0:39,0:24:60.88:0,61,925	0/1:38,0:22:23.81:24,0,442	0/1:9,0:5:21.97:22,0,39	0/1:12,13:19:99:414,0,165	0/0:33,0:26:69.76:0,70,1030	0/0:23,0:17:45.15:0,45,655	0/0:26,0:23:57.17:0,57,769	0/0:31,0:25:69.12:0,69,972	0/0:29,0:23:63.21:0,63,928	0/1:14,0:13:0.09:0,0,164	0/1:15,2:8:56.78:57,0,198	0/1:11,6:12:99:168,0,107	0/1:46,12:45:20.29:20,0,552	0/1:18,2:7:45.81:46,0,115	0/1:13,4:9:99:131,0,149	0/1:20,6:24:99:154,0,348	0/1:17,8:18:54.98:262,0,55	0/1:26,7:17:99:216,0,248	0/1:14,4:14:99:124,0,231	0/1:10,1:6:26.88:27,0,118
chr10	38606428	.	C	CTGTG	14724.02	PASS	AB=0.731;AC=45;AF=0.804;AN=56;BaseQRankSum=-4.238;DP=687;FS=15.948;HRun=0;HaplotypeScore=155.1046;InbreedingCoeff=0.6629;MQ=60.89;MQ0=6;MQRankSum=0.589;QD=25.56;ReadPosRankSum=1.426;VQSLOD=4.0138;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:35,0:35:31.48:561,31,0	1/1:3,0:4:2.74:12,3,0	0/0:26,0:13:6.02:0,6,98	0/0:32,0:21:27.09:0,27,426	1/1:10,7:22:23.55:468,24,0	0/0:19,0:24:47.11:0,47,685	0/0:24,0:28:45.02:0,45,625	0/1:18,1:22:19.84:450,0,20	1/1:8,18:29:53.65:1185,54,0	1/1:28,0:28:33.09:519,33,0	1/1:12,0:12:6.02:111,6,0	1/1:7,2:18:24.08:461,24,0	0/1:11,14:31:1.49:817,0,1	1/1:8,10:19:35.69:759,36,0	1/1:9,19:29:45.15:1106,45,0	1/1:4,11:20:38.34:775,38,0	1/1:11,10:26:19:691,19,0	1/1:14,1:15:16.75:349,17,0	1/1:19,14:35:27.14:987,27,0	1/1:11,3:15:9.03:215,9,0	1/1:21,37:71:59.72:1784,60,0	1/1:6,16:26:44.08:922,44,0	0/1:11,1:17:0.02:0,0,0	1/1:13,0:25:5.48:104,5,0	1/1:5,10:18:23.27:405,23,0	1/1:12,12:25:45.15:1045,45,0	1/1:6,8:18:32.32:627,32,0	1/1:3,10:15:15.05:369,15,0
chr10	38606447	.	T	TGTGTGCGC	7029.22	PASS	AB=0.996;AC=26;AF=0.464;AN=56;BaseQRankSum=8.794;DP=707;FS=1.516;HRun=0;HaplotypeScore=225.7462;InbreedingCoeff=-0.3454;MQ=54.40;MQ0=5;MQRankSum=2.595;QD=12.51;ReadPosRankSum=9.504;VQSLOD=2.1568;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:7,25:37:33.07:1484,33,0	0/0:3,0:3:6.01:0,6,58	0/0:33,0:15:33.36:0,33,485	0/0:43,0:26:65.54:0,66,1040	0/1:20,0:20:78.88:79,0,256	0/0:25,0:24:59.71:0,60,1620	0/0:26,0:26:68.76:0,69,1513	0/1:30,0:30:34.16:34,0,1072	0/1:29,0:29:99:188,0,120	1/1:10,10:30:66.21:1805,66,0	1/1:4,6:15:5.76:269,6,0	0/1:12,0:12:21.96:253,0,22	0/1:30,0:31:99:164,0,231	0/1:23,0:23:99:111,0,421	0/1:27,0:27:99:295,0,157	0/1:20,0:20:99:148,0,129	0/1:26,0:27:99:239,0,301	1/1:5,13:20:4.14:696,4,0	0/1:26,0:26:99:253,0,319	0/1:11,0:11:32.82:33,0,83	0/1:72,0:72:99:332,0,465	0/1:29,0:28:99:151,0,305	0/0:14,0:15:14.86:0,15,217	0/1:26,0:26:54.22:89,0,54	0/1:19,0:19:49.99:50,0,284	0/1:22,0:22:99:183,0,292	0/1:20,0:20:99:109,0,316	0/1:15,0:15:65.10:65,0,88
chr10	38606616	.	TAGGG	T	644.27	PASS	AB=0.670;AC=18;AF=0.321;AN=56;BaseQRankSum=6.649;DP=482;FS=3.318;HRun=0;HaplotypeScore=141.3851;InbreedingCoeff=0.7082;MQ=61.57;MQ0=4;MQRankSum=-3.462;QD=7.00;ReadPosRankSum=-2.121;VQSLOD=2.6976;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,109,2831	0/0:8,0:8:24.08:0,24,693	0/0:41,0:35:62.53:0,63,2433	0/0:53,0:41:13.78:0,14,2211	0/0:13,0:13:39.09:0,39,1045	0/0:20,0:20:54.13:0,54,1402	0/0:21,0:21:63.13:0,63,1642	1/1:2,0:2:6.01:67,6,0	0/0:23,0:23:69.18:0,69,1760	0/0:30,0:30:90.31:0,90,2546	0/0:18,0:18:45.01:0,45,1064	0/0:2,0:2:0:0,0,0	0/0:24,0:24:66:0,66,1851	0/0:11,0:11:30.10:0,30,859	0/0:15,0:15:39.13:0,39,1122	0/0:21,0:20:60.12:0,60,1553	0/0:21,0:20:0.83:0,1,1383	0/0:16,1:17:45.15:0,45,1217	1/1:4,2:7:3.47:113,3,0	1/1:8,3:11:10.55:164,11,0	1/1:16,4:25:0.64:46,1,0	1/1:4,0:6:1.66:22,2,0	0/1:1,5:9:0.25:0,0,0	0/1:8,2:14:0.02:0,0,1	0/0:5,3:10:0.86:0,1,2	1/1:5,0:6:14.42:123,14,0	1/1:3,4:7:8.38:169,8,0	1/1:3,0:3:9.01:104,9,0
chr10	38606623	.	GTTTGTACA	G	288.66	PASS	AB=0.869;AC=16;AF=0.286;AN=56;BaseQRankSum=6.639;DP=467;FS=1.927;HRun=0;HaplotypeScore=169.7405;InbreedingCoeff=0.4172;MQ=63.60;MQ0=2;MQRankSum=-3.740;QD=4.81;ReadPosRankSum=-2.853;VQSLOD=2.1728;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,114,4549	0/0:9,0:9:27.09:0,27,1097	0/0:35,0:31:91.19:0,91,3628	0/0:49,0:39:38.65:0,39,3709	0/0:15,0:15:45.15:0,45,1950	0/0:21,0:21:57.16:0,57,2386	0/0:21,0:21:63.17:0,63,2689	1/1:2,0:2:1.55:4,2,0	0/0:24,0:24:72.17:0,72,2659	0/0:32,0:32:96.31:0,96,3913	0/0:16,0:16:45.12:0,45,1755	1/1:3,0:3:2.60:36,3,0	0/0:23,0:23:63.22:0,63,2735	0/0:11,0:11:30.10:0,30,1308	0/0:15,0:15:42.14:0,42,1747	0/0:21,0:20:60.21:0,60,2660	0/0:21,0:21:45.55:0,46,2372	0/0:14,0:15:39.13:0,39,1695	0/1:7,0:7:41.63:109,0,42	1/1:7,0:7:2.35:31,2,0	0/0:23,0:24:1.07:0,1,5	1/1:7,0:6:2.91:33,3,0	0/1:6,3:9:0.09:1,0,0	0/0:14,0:14:2.23:0,2,36	1/1:9,1:10:0.22:1,0,0	0/1:6,0:6:14.87:49,0,15	0/1:5,3:7:24.24:113,0,24	1/1:1,0:1:3.01:50,3,0
chr10	38606627	.	GTACA	G	191.11	PASS	AB=0.952;AC=12;AF=0.222;AN=54;BaseQRankSum=6.894;DP=478;FS=0.944;HRun=0;HaplotypeScore=143.5998;InbreedingCoeff=0.6319;MQ=69.06;MQ0=4;MQRankSum=-5.512;QD=3.98;ReadPosRankSum=-0.542;VQSLOD=2.3046;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,102,2812	0/0:9,0:9:27.08:0,27,687	0/0:41,0:36:99:0,106,2799	0/0:51,0:39:77.15:0,77,2399	0/0:17,0:17:51.18:0,51,1375	0/0:22,0:22:60.21:0,60,1650	0/0:21,0:21:60.21:0,60,1669	./.	0/0:22,0:22:60.21:0,60,1595	0/0:34,0:34:99:0,99,2587	0/0:15,0:15:42.14:0,42,1127	1/1:3,0:3:2.83:36,3,0	0/0:23,0:23:63.09:0,63,1687	0/0:11,0:11:30.06:0,30,809	0/0:19,0:19:51.18:0,51,1388	0/0:23,0:22:66.23:0,66,1811	0/0:23,0:22:50.99:0,51,1539	0/0:15,0:15:39.13:0,39,1054	1/1:6,1:7:1.77:103,2,0	0/0:4,2:6:0.34:0,0,1	0/0:23,1:24:0.51:0,1,2	0/1:6,0:5:0.17:0,0,0	0/1:8,1:9:0.33:0,0,1	0/0:12,1:13:6.14:0,6,42	0/1:9,1:10:0.05:0,0,0	1/1:5,0:5:8.11:62,8,0	0/1:7,0:6:0.56:82,0,1	1/1:1,0:1:3.01:32,3,0
chr10	38606628	.	TAC	T	165.67	PASS	AB=0.894;AC=14;AF=0.259;AN=54;BaseQRankSum=6.719;DP=469;FS=0.000;HRun=0;HaplotypeScore=126.6102;InbreedingCoeff=0.6227;MQ=69.50;MQ0=4;MQRankSum=-5.500;QD=2.63;ReadPosRankSum=0.083;VQSLOD=2.3295;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,102,1932	0/0:9,0:9:24.08:0,24,455	0/0:39,0:36:99:0,105,1952	0/0:51,0:38:67.77:0,68,1586	0/0:17,0:17:51.17:0,51,952	0/0:22,0:22:60.21:0,60,1125	0/0:21,0:21:60.21:0,60,1151	./.	0/0:21,0:21:60.19:0,60,1089	0/0:33,0:33:93.32:0,93,1733	0/0:15,0:15:42.14:0,42,793	1/1:3,0:3:2.75:19,3,0	0/0:24,0:24:66.10:0,66,1196	0/0:11,0:11:30.10:0,30,549	0/0:19,0:19:51.17:0,51,977	0/0:23,0:22:66.23:0,66,1251	0/0:23,0:22:50.73:0,51,1048	0/0:15,0:15:39.13:0,39,714	0/1:6,0:6:18.29:97,0,18	0/1:5,1:6:0.23:0,0,0	0/0:17,4:21:0.50:0,0,1	0/1:4,1:4:0:0,0,1	0/1:8,1:9:0:0,0,0	0/1:11,2:13:0.12:0,0,1	0/1:9,1:10:0.08:0,0,0	1/1:3,0:3:8.93:76,9,0	1/1:6,1:6:13.81:94,14,0	1/1:1,0:1:2.37:8,2,0
chr10	38606639	.	GTATGGGGGTGTGTATTAGATGTA	G	891.55	PASS	AB=1.000;AC=12;AF=0.231;AN=52;BaseQRankSum=7.192;DP=482;FS=8.393;HRun=0;HaplotypeScore=302.6569;InbreedingCoeff=0.6507;MQ=69.44;MQ0=4;MQRankSum=-5.182;QD=14.38;ReadPosRankSum=0.037;VQSLOD=1.0387;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,99,5578	0/0:7,0:7:21.07:0,21,1455	0/0:45,0:41:99:0,107,4962	0/0:52,0:41:80.61:0,81,4622	0/0:17,0:17:51.18:0,51,3571	0/0:23,0:23:69.16:0,69,4675	0/0:23,0:23:69.24:0,69,4968	./.	0/0:21,0:21:57.20:0,57,4385	0/0:31,0:31:93.28:0,93,4952	0/0:13,0:13:33.10:0,33,1339	1/1:3,0:3:2.60:60,3,0	0/0:25,0:25:68.90:0,69,4289	0/0:11,0:11:30.10:0,30,2143	0/0:22,0:22:60.19:0,60,4117	0/0:22,0:21:63.19:0,63,4407	0/1:24,0:23:57.68:58,0,4157	0/0:13,0:13:33.09:0,33,2582	1/1:7,0:7:17.38:291,17,0	0/0:6,0:6:0:0,0,0	0/0:25,0:25:5.21:0,5,33	0/1:6,0:5:0.26:0,0,0	1/1:7,3:10:0.86:2,1,0	0/0:14,0:14:5.57:0,6,33	0/0:10,1:11:0:0,0,0	1/1:4,0:4:12.04:255,12,0	1/1:5,3:7:7.24:366,7,0	./.
chr10	38606640	.	TATGGGG	T	163.70	PASS	AB=0.941;AC=9;AF=0.173;AN=52;BaseQRankSum=5.331;DP=466;FS=20.894;HRun=0;HaplotypeScore=166.2666;InbreedingCoeff=0.3269;MQ=70.51;MQ0=4;MQRankSum=-4.119;QD=3.81;ReadPosRankSum=0.555;VQSLOD=1.5427;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,1:36:96.70:0,97,3238	0/0:7,0:7:21.07:0,21,790	0/0:44,0:39:99:0,107,3349	0/0:50,0:41:91.65:0,92,3228	0/0:17,0:17:51.18:0,51,1868	0/0:23,0:23:69.06:0,69,2211	0/0:25,0:25:75.26:0,75,2625	./.	0/0:21,0:21:60.19:0,60,2040	0/0:32,0:32:96.33:0,96,3215	0/0:12,0:12:33.10:0,33,1110	1/1:3,0:3:2.78:39,3,0	0/0:27,0:27:74.99:0,75,2278	0/0:12,0:12:33.11:0,33,1130	0/0:24,0:24:63.22:0,63,2144	0/0:22,0:21:63.19:0,63,2178	0/0:22,1:22:8.66:0,9,1886	0/0:12,0:12:33.09:0,33,1131	0/1:5,0:5:9.52:97,0,10	0/1:3,0:3:0.32:0,0,0	0/0:18,2:20:2.82:0,3,34	0/1:3,1:4:0:0,0,0	0/1:8,1:9:0.56:1,0,1	0/0:9,4:13:5.73:0,6,34	0/1:7,1:8:0:1,0,0	0/1:4,0:4:10.36:47,0,10	0/1:7,0:6:29:87,0,29	./.
chr10	38606651	.	GTATTAGA	G	306.95	PASS	AB=0.944;AC=11;AF=0.212;AN=52;BaseQRankSum=7.190;DP=450;FS=21.055;HRun=0;HaplotypeScore=174.8009;InbreedingCoeff=0.6096;MQ=67.21;MQ0=5;MQRankSum=-5.478;QD=7.31;ReadPosRankSum=-1.131;VQSLOD=1.3651;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,1:36:51.82:0,52,2469	0/0:8,0:8:18.53:0,19,642	0/0:37,0:32:85.04:0,85,2492	0/0:42,0:29:49.79:0,50,1951	0/0:17,0:17:49.96:0,50,1583	0/0:24,0:24:68.58:0,69,2331	0/0:28,0:28:81.19:0,81,2945	./.	0/0:26,0:26:72.16:0,72,2375	0/0:25,0:25:72.21:0,72,2486	0/0:10,0:10:27.09:0,27,608	1/1:2,0:2:2.54:52,3,0	0/0:26,0:26:72.07:0,72,2527	0/0:15,0:15:42.14:0,42,1362	0/0:26,0:26:74.18:0,74,2473	0/0:20,0:19:57.20:0,57,2008	0/0:21,0:21:6.87:0,7,1932	0/0:13,0:13:33.11:0,33,1223	1/1:5,1:6:14.51:182,15,0	0/1:3,0:3:0:0,0,0	0/0:17,2:19:5.97:0,6,28	0/0:4,0:4:0.47:0,0,1	0/1:9,0:9:0.60:1,0,1	1/1:10,0:10:1.18:3,1,0	0/0:8,0:8:0.47:0,0,1	0/1:4,1:5:73.13:73,0,112	1/1:7,0:6:8.46:123,8,0	./.
chr10	38606652	.	TATTA	T	55.75	PASS	AB=0.833;AC=7;AF=0.146;AN=48;BaseQRankSum=5.395;DP=420;FS=8.197;HRun=0;HaplotypeScore=139.0332;InbreedingCoeff=0.4456;MQ=69.05;MQ0=5;MQRankSum=-3.134;QD=3.98;ReadPosRankSum=1.356;VQSLOD=2.1820;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:79.91:0,80,1987	0/0:7,0:7:18.53:0,19,504	0/0:39,0:32:74.63:0,75,1951	0/0:42,0:28:73.01:0,73,1550	0/0:17,0:17:49.98:0,50,1247	0/0:24,0:24:72.20:0,72,1811	0/0:27,0:27:81.27:0,81,2156	./.	0/0:26,0:26:72.24:0,72,1863	0/0:24,0:24:72.24:0,72,1928	0/0:10,0:10:27.09:0,27,521	1/1:1,0:1:2.98:22,3,0	0/0:27,0:27:75.26:0,75,1972	0/0:16,0:16:45.15:0,45,1143	0/0:26,0:26:74.28:0,74,1952	0/0:20,0:19:57.20:0,57,1567	0/0:24,0:23:39.93:0,40,1598	0/0:13,0:13:33.11:0,33,944	0/1:4,1:5:16.93:77,0,17	./.	0/0:10,4:14:4.42:0,4,43	0/1:1,1:2:0:0,0,0	0/0:5,2:7:0.15:0,0,1	0/0:1,4:5:5.68:0,6,28	./.	0/1:2,0:2:29.42:29,0,79	1/1:4,0:4:6.93:40,7,0	./.
chr10	38606662	.	ATG	A	2722.38	PASS	AB=0.976;AC=21;AF=0.389;AN=54;BaseQRankSum=-0.394;DP=477;FS=9.909;HRun=0;HaplotypeScore=111.1257;InbreedingCoeff=0.5998;MQ=58.37;MQ0=8;MQRankSum=5.688;QD=12.37;ReadPosRankSum=3.720;VQSLOD=2.7575;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:42:27.41:0,27,245	1/1:3,1:5:5.23:41,5,0	0/1:31,0:23:6.68:7,0,26	0/0:33,0:17:2.48:0,2,67	1/1:6,6:14:20.68:199,21,0	0/1:24,2:26:30.33:30,0,438	0/0:26,0:27:36.91:0,37,675	0/0:9,0:6:12.03:0,12,138	1/1:5,17:26:59.33:587,59,0	0/0:14,0:30:38.69:0,39,344	0/0:5,0:9:0:0,0,0	0/0:5,0:4:2.68:0,3,11	1/1:10,14:26:41.78:442,42,0	1/1:4,8:13:29.78:318,30,0	1/1:7,15:24:53.61:558,54,0	1/1:8,9:17:26.91:290,27,0	1/1:8,16:24:38.94:428,39,0	0/0:13,0:14:17.95:0,18,178	0/0:11,0:11:22.72:0,23,205	0/0:2,0:2:3.01:0,3,37	0/0:36,0:35:5.99:0,6,50	1/1:6,0:6:0.12:1,0,0	0/1:6,0:6:0:0,0,0	0/0:14,0:13:2.89:0,3,41	./.	0/0:11,0:9:12.86:0,13,130	0/0:7,0:6:7.18:0,7,50	0/0:1,0:1:3.01:0,3,43
chr10	38607337	.	AC	A	9932.57	PASS	AB=0.976;AC=50;AF=0.893;AN=56;BaseQRankSum=-4.884;DP=544;FS=3.711;HRun=10;HaplotypeScore=60.4288;InbreedingCoeff=0.6853;MQ=72.17;MQ0=0;MQRankSum=-3.415;QD=19.40;ReadPosRankSum=4.847;VQSLOD=5.6725;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,23:32:79.85:663,80,0	1/1:1,12:13:32.99:286,33,0	0/0:18,0:17:28.31:0,28,232	0/1:11,0:11:69.62:70,0,94	1/1:2,24:26:65.96:573,66,0	0/0:9,0:14:10.74:0,11,96	0/1:8,1:20:2.87:3,0,95	1/1:3,9:12:26.95:228,27,0	1/1:2,13:15:29.98:260,30,0	1/1:5,17:22:53.19:450,53,0	1/1:1,16:17:47.95:410,48,0	1/1:0,11:11:29.99:260,30,0	1/1:1,18:19:50.99:443,51,0	1/1:1,8:9:23.99:208,24,0	1/1:4,21:25:50.96:439,51,0	1/1:2,17:19:47.98:417,48,0	1/1:5,25:30:65.98:573,66,0	1/1:1,15:16:38.99:339,39,0	1/1:6,13:19:38.98:338,39,0	1/1:3,24:27:65.97:573,66,0	1/1:3,20:23:53.98:469,54,0	1/1:1,20:22:61.02:500,61,0	1/1:2,10:12:23.94:208,24,0	1/1:6,20:31:67.17:525,67,0	1/1:3,18:21:47.99:417,48,0	1/1:4,18:22:53.97:469,54,0	1/1:3,23:27:68.01:579,68,0	1/1:2,9:11:26.99:234,27,0
chr10	38607931	.	GCC	G	10923.04	PASS	AB=0.933;AC=49;AF=0.875;AN=56;BaseQRankSum=4.354;DP=451;FS=36.824;HRun=9;HaplotypeScore=62.3194;InbreedingCoeff=0.7978;MQ=59.05;MQ0=5;MQRankSum=2.226;QD=26.97;ReadPosRankSum=2.795;VQSLOD=2.3473;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,18:21:51.15:590,51,0	1/1:0,3:3:6.02:70,6,0	0/0:13,0:8:21.07:0,21,335	0/1:13,1:6:19.06:19,0,147	1/1:0,26:26:60.16:699,60,0	0/0:13,0:13:39.12:0,39,616	0/0:19,0:19:41.63:0,42,649	1/1:1,11:10:24.04:264,24,0	1/1:0,9:9:18.05:210,18,0	1/1:2,9:11:27.04:297,27,0	1/1:1,20:21:54.16:629,54,0	1/1:0,11:11:30.09:350,30,0	1/1:3,11:14:33.09:384,33,0	1/1:1,8:9:15.04:175,15,0	1/1:1,17:18:36.11:419,36,0	1/1:0,15:15:39.12:455,39,0	1/1:4,23:27:49.43:747,49,0	1/1:0,21:21:60.18:699,60,0	1/1:2,6:8:18.05:209,18,0	1/1:1,17:18:45.12:524,45,0	1/1:1,30:31:72.21:839,72,0	1/1:1,18:19:42.12:489,42,0	1/1:1,10:11:27.08:315,27,0	1/1:3,22:25:66.19:769,66,0	1/1:1,17:17:45.13:524,45,0	1/1:1,19:19:54.14:617,54,0	1/1:1,14:15:36.07:419,36,0	1/1:1,7:8:18.05:210,18,0
chr10	38608835	.	A	AAC	275.90	PASS	AB=0.910;AC=20;AF=0.400;AN=50;BaseQRankSum=-1.071;DP=510;FS=8.789;HRun=0;HaplotypeScore=91.9589;InbreedingCoeff=0.2002;MQ=73.06;MQ0=11;MQRankSum=0.012;QD=1.17;ReadPosRankSum=-0.566;VQSLOD=1.0596;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:24:3.88:4,0,9	1/1:12,0:13:6.02:77,6,0	./.	./.	1/1:16,2:18:3.01:44,3,0	0/0:16,0:19:5.68:0,6,28	0/0:16,0:18:5.64:0,6,27	0/1:25,0:25:0:0,0,0	1/1:11,0:11:3.01:44,3,0	./.	0/0:9,0:15:2.86:0,3,10	0/0:9,0:11:2.84:0,3,14	0/0:9,0:9:2.99:0,3,24	0/1:14,4:18:25.78:38,0,26	1/1:13,0:12:6:59,6,0	0/1:13,4:21:26.99:76,0,27	0/1:19,1:22:24.76:35,0,25	1/1:17,0:18:3.15:11,3,0	1/1:14,0:12:0.47:1,0,0	0/0:23,0:23:5.89:0,6,56	0/1:20,0:17:1.13:1,0,26	0/0:16,0:16:5.68:0,6,28	0/0:15,0:16:7.67:0,8,40	0/0:22,0:26:17.87:0,18,173	1/1:17,0:15:2.97:20,3,0	0/0:16,0:16:2.58:0,3,25	0/0:19,0:20:2.84:0,3,14	0/0:9,0:10:2.84:0,3,14
chr10	38609197	.	ATGC	A	7377.10	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=14.015;DP=709;FS=0.333;HRun=0;HaplotypeScore=103.6933;InbreedingCoeff=0.9993;MQ=92.10;MQ0=0;MQRankSum=-6.431;QD=41.44;ReadPosRankSum=3.395;VQSLOD=6.2892;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:46:99:0,135,2984	1/1:0,7:7:21.07:343,21,0	0/0:38,0:38:82.91:0,83,2114	0/0:29,0:29:81.28:0,81,1691	1/1:1,20:21:48.16:747,48,0	0/0:28,0:28:81.28:0,81,1773	0/0:22,0:22:63.22:0,63,1407	0/0:25,0:25:66.23:0,66,1448	1/1:0,32:32:87.25:1391,87,0	0/0:35,0:35:84.29:0,84,1879	0/0:15,0:15:45.15:0,45,1004	0/0:17,0:17:48.16:0,48,1072	1/1:4,22:26:60.20:979,60,0	1/1:2,24:26:69.24:1126,69,0	1/1:0,20:20:54.18:882,54,0	1/1:1,26:27:75.26:1224,75,0	1/1:0,19:19:42.14:686,42,0	0/0:16,0:16:45.15:0,45,981	0/0:21,0:21:54.19:0,54,1207	0/0:32,0:32:93.32:0,93,2040	0/0:42,0:42:99:0,123,2662	0/0:21,0:21:57.20:0,57,1269	0/0:32,0:32:84.29:0,84,1875	0/0:21,0:21:51.18:0,51,1130	0/0:21,0:21:60.21:0,60,1336	0/0:28,0:28:84.28:0,84,1819	0/0:26,0:26:72.25:0,72,1576	0/0:15,0:15:45.15:0,45,1005
chr10	38609430	.	G	GA	11570.13	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=12.841;DP=729;FS=5.735;HRun=1;HaplotypeScore=108.6061;InbreedingCoeff=0.9999;MQ=87.55;MQ0=0;MQRankSum=-3.343;QD=41.32;ReadPosRankSum=1.216;VQSLOD=4.4861;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:56:99:0,156,2007	0/0:12,0:12:36.12:0,36,467	0/0:33,0:34:93.29:0,93,1175	0/0:31,0:31:75.23:0,75,942	0/0:36,0:36:96.31:0,96,1244	0/0:30,0:30:87.28:0,87,1129	0/0:25,0:25:72.22:0,72,921	1/1:1,31:32:93.31:1392,93,0	0/0:22,0:22:66.19:0,66,830	0/0:28,0:28:81.26:0,81,1042	0/0:15,0:15:45.15:0,45,584	1/1:1,21:22:57.19:854,57,0	0/0:33,0:33:99:0,99,1267	0/0:19,0:19:54.18:0,54,701	0/0:21,0:21:63.20:0,63,818	0/0:34,0:34:96.28:0,96,1217	0/0:33,0:33:96.30:0,96,1231	0/0:20,0:20:60.20:0,60,779	1/1:0,18:18:54.18:806,54,0	1/1:1,19:20:57.19:848,57,0	1/1:0,31:31:87.29:1304,87,0	1/1:0,17:18:51.17:750,51,0	1/1:0,22:22:60.20:898,60,0	1/1:1,25:27:63.21:944,63,0	1/1:0,24:24:72.24:1078,72,0	1/1:1,22:23:30.27:949,30,0	1/1:1,30:31:84.28:1258,84,0	1/1:1,11:12:33.11:488,33,0
chr10	38609700	.	CTATA	C	8599.65	PASS	AB=1.000;AC=41;AF=0.732;AN=56;BaseQRankSum=11.327;DP=473;FS=5.373;HRun=0;HaplotypeScore=105.3595;InbreedingCoeff=0.8505;MQ=74.37;MQ0=2;MQRankSum=-0.628;QD=24.85;ReadPosRankSum=1.461;VQSLOD=4.1560;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:42.12:0,42,998	1/1:4,8:12:15.05:257,15,0	0/1:7,0:6:7.28:11,0,7	0/0:15,0:14:3.30:0,3,62	1/1:4,24:29:57.13:863,57,0	0/0:14,0:14:39.12:0,39,917	0/0:11,0:11:9.03:0,9,219	1/1:33,3:36:78.23:1016,78,0	1/1:3,7:10:15.05:257,15,0	0/0:17,0:18:35.85:0,36,784	0/0:21,0:21:45.15:0,45,1126	1/1:15,0:15:27.09:364,27,0	1/1:1,12:12:18.06:309,18,0	1/1:3,13:16:33.11:566,33,0	1/1:1,10:10:9.03:154,9,0	1/1:4,6:10:15.05:257,15,0	1/1:5,22:26:42.14:720,42,0	0/0:18,0:18:54.17:0,54,1188	1/1:12,1:13:27.08:358,27,0	1/1:21,0:21:36.05:434,36,0	1/1:14,0:14:27.09:360,27,0	1/1:7,1:8:15.05:211,15,0	1/1:17,0:17:27.04:347,27,0	1/1:9,0:9:8.69:105,9,0	1/1:14,0:14:27.09:367,27,0	1/1:21,1:22:14.24:744,14,0	1/1:23,0:23:33.11:428,33,0	1/1:19,0:19:36.12:469,36,0
chr10	38609713	.	TATA	T	8924.37	PASS	AB=1.000;AC=34;AF=0.607;AN=56;BaseQRankSum=13.188;DP=440;FS=13.697;HRun=0;HaplotypeScore=90.7526;InbreedingCoeff=0.5102;MQ=67.70;MQ0=2;MQRankSum=-1.820;QD=26.80;ReadPosRankSum=3.789;VQSLOD=4.1532;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:48.11:0,48,971	0/1:11,0:11:57.79:96,0,58	0/0:7,0:6:13.28:0,13,81	0/0:6,0:5:8.29:0,8,74	0/1:28,0:28:16.11:464,0,16	0/0:19,0:19:54.12:0,54,981	0/0:5,0:5:15.04:0,15,273	1/1:6,29:35:99:1414,101,0	0/1:13,0:13:87.17:87,0,131	0/0:13,0:13:32.41:0,32,714	0/0:17,0:17:51.17:0,51,1103	1/1:0,14:14:27.09:500,27,0	0/1:16,0:15:78.98:114,0,79	0/1:17,0:17:38.58:224,0,39	1/1:10,0:9:8.98:72,9,0	0/1:8,0:8:33.53:99,0,34	1/1:23,0:22:42.78:337,43,0	0/0:20,0:20:60.17:0,60,1209	1/1:13,5:18:53.05:568,53,0	1/1:2,17:19:47.98:715,48,0	1/1:3,13:16:29.93:515,30,0	1/1:1,5:6:15.05:238,15,0	1/1:1,13:14:29.89:456,30,0	1/1:0,9:9:9.03:167,9,0	1/1:2,14:16:32.77:504,33,0	1/1:3,22:25:8.72:1072,9,0	1/1:0,18:18:33.11:612,33,0	1/1:2,15:16:36.12:668,36,0
chr10	38609724	.	T	TA	5508.58	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=2.196;DP=468;FS=1.169;HRun=2;HaplotypeScore=92.6462;InbreedingCoeff=0.9852;MQ=68.67;MQ0=1;MQRankSum=-3.045;QD=24.93;ReadPosRankSum=-2.040;VQSLOD=4.1587;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:56.96:0,57,611	0/0:13,0:13:33.08:0,33,376	0/0:8,0:8:19.13:0,19,183	0/0:4,0:4:10.79:0,11,75	0/0:29,0:29:71.89:0,72,720	0/0:18,0:18:54.11:0,54,635	0/0:6,0:6:15.04:0,15,175	1/1:31,4:35:90.06:946,90,0	0/0:13,0:13:36.10:0,36,422	0/0:15,0:15:35.99:0,36,394	0/0:22,0:22:59.73:0,60,660	1/1:12,0:12:27.05:274,27,0	0/0:17,0:16:39.06:0,39,430	0/0:20,0:20:51.14:0,51,590	0/0:15,0:14:27.01:0,27,279	0/0:9,0:9:24.06:0,24,276	0/0:21,0:20:45.13:0,45,528	0/0:18,0:18:48.12:0,48,577	1/1:7,12:19:54.03:619,54,0	1/1:19,2:21:59.87:571,60,0	1/1:12,2:14:36.05:361,36,0	1/1:8,0:8:18.41:158,18,0	1/1:13,1:14:35.89:330,36,0	1/1:9,0:9:11.97:99,12,0	1/1:15,2:17:44.98:438,45,0	1/1:30,1:31:45.73:763,46,0	1/1:19,0:19:44.89:401,45,0	1/1:21,1:21:62.84:549,63,0
chr10	38613083	.	CAAG	C	3003.76	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=10.006;DP=633;FS=0.000;HRun=0;HaplotypeScore=91.2329;InbreedingCoeff=0.9992;MQ=86.90;MQ0=0;MQRankSum=-1.979;QD=41.15;ReadPosRankSum=1.748;VQSLOD=4.8571;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:96.33:0,96,2175	0/0:17,0:17:48.16:0,48,1088	0/0:17,0:17:35.42:0,35,804	0/0:27,0:27:72.24:0,72,1431	0/0:36,0:36:99:0,105,2297	0/0:17,0:17:51.16:0,51,1084	0/0:23,0:23:63.20:0,63,1386	0/0:25,0:25:63.20:0,63,1333	0/0:19,0:19:54.17:0,54,1180	0/0:32,0:32:93.32:0,93,2109	0/0:21,0:21:60.21:0,60,1358	1/1:0,18:18:45.15:750,45,0	0/0:20,0:20:60.21:0,60,1360	0/0:16,0:16:48.16:0,48,1088	0/0:23,0:23:66.23:0,66,1479	0/0:23,0:23:69.23:0,69,1522	0/0:23,0:23:66.20:0,66,1447	0/0:20,0:20:60.21:0,60,1332	0/0:16,0:16:42.14:0,42,951	0/0:23,0:23:66.23:0,66,1496	0/0:18,0:18:54.19:0,54,1224	0/0:29,0:29:72.25:0,72,1630	1/1:0,32:32:87.27:1447,87,0	1/1:3,20:23:57.19:950,57,0	0/0:20,0:20:57.20:0,57,1292	0/0:30,0:30:84.29:0,84,1905	0/0:24,0:23:72.22:0,72,1547	0/0:8,0:8:24.08:0,24,544
chr10	38614436	.	T	TG	2175.08	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-9.934;DP=703;FS=20.610;HRun=7;HaplotypeScore=68.7244;InbreedingCoeff=0.9991;MQ=84.07;MQ0=0;MQRankSum=-0.987;QD=30.21;ReadPosRankSum=1.601;VQSLOD=2.0524;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,99,948	0/0:13,0:14:42:0,42,394	0/0:19,0:20:23.25:0,23,326	0/0:22,0:22:45.67:0,46,455	0/0:17,0:17:45.04:0,45,427	0/0:23,0:23:66.09:0,66,632	0/0:32,0:32:84.12:0,84,811	0/0:21,0:21:48.07:0,48,463	0/0:19,0:19:42.06:0,42,406	0/0:28,0:28:75.11:0,75,724	0/0:19,0:19:48.07:0,48,463	1/1:2,28:30:84.26:1015,84,0	0/0:26,0:26:72.10:0,72,690	0/0:20,0:20:54.06:0,54,510	0/0:28,0:27:75.11:0,75,724	0/0:33,0:33:96.13:0,96,915	0/0:31,0:31:87.14:0,87,840	0/0:23,0:23:51.07:0,51,493	0/0:17,0:17:45.03:0,45,421	0/0:24,0:24:63.10:0,63,608	0/0:49,0:49:99:0,129,1239	0/0:27,0:27:66.04:0,66,612	1/1:1,21:22:60.18:723,60,0	1/1:2,18:20:48.15:580,48,0	0/0:29,0:29:75.09:0,75,717	0/0:28,0:28:72.11:0,72,695	0/0:23,0:23:69.09:0,69,661	0/0:19,0:19:54.08:0,54,522
chr10	38614596	.	AG	A	8935.38	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=13.849;DP=770;FS=5.865;HRun=2;HaplotypeScore=72.9702;InbreedingCoeff=1.0000;MQ=90.03;MQ0=0;MQRankSum=-7.921;QD=39.19;ReadPosRankSum=-0.055;VQSLOD=5.1482;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,147,2292	0/0:14,0:14:42.14:0,42,671	0/0:33,0:33:89.62:0,90,1388	0/0:25,0:25:75.18:0,75,1125	0/0:22,0:22:66.23:0,66,1054	0/0:24,0:24:72.23:0,72,1128	0/0:30,0:30:90.28:0,90,1391	1/1:0,26:26:78.26:1091,78,0	0/0:25,0:25:75.26:0,75,1199	0/0:35,0:35:99:0,105,1655	0/0:23,0:23:69.24:0,69,1103	0/0:35,0:35:99:0,105,1642	0/0:36,0:36:99:0,108,1725	0/0:27,0:27:81.27:0,81,1270	0/0:35,0:35:99:0,105,1656	0/0:28,0:28:81.25:0,81,1249	0/0:27,0:27:81.28:0,81,1290	0/0:25,0:25:75.26:0,75,1190	1/1:0,20:20:60.20:839,60,0	1/1:0,18:18:54.09:711,54,0	1/1:1,46:47:99:1636,117,0	1/1:0,37:37:99:1511,108,0	0/0:17,0:17:51.17:0,51,815	0/0:32,0:32:96.28:0,96,1505	1/1:0,20:20:51.17:713,51,0	1/1:0,30:30:90.30:1259,90,0	1/1:0,18:18:48.16:671,48,0	1/1:0,12:12:36.12:504,36,0
chr10	38615155	.	AACACT	A	11971.33	PASS	AB=0.510;AC=17;AF=0.304;AN=56;BaseQRankSum=18.212;DP=695;FS=4.842;HRun=0;HaplotypeScore=144.6704;InbreedingCoeff=0.9154;MQ=66.73;MQ0=1;MQRankSum=-16.593;QD=58.11;ReadPosRankSum=0.848;VQSLOD=5.6064;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,132,4146	0/0:10,0:10:30.10:0,30,965	0/0:27,0:22:63.22:0,63,1977	0/0:39,0:38:99:0,111,3105	0/0:21,0:21:63.22:0,63,2076	0/0:16,0:16:48.16:0,48,1562	0/0:27,0:26:81.28:0,81,2606	1/1:0,21:21:63.19:1357,63,0	0/0:29,0:29:87.28:0,87,2767	0/0:38,0:38:99:0,111,3626	0/0:17,0:17:51.18:0,51,1697	0/0:32,0:32:96.33:0,96,3104	0/0:16,0:16:48.16:0,48,1541	0/0:25,0:25:75.26:0,75,2474	0/0:35,0:35:99:0,105,3379	0/0:25,0:25:75.24:0,75,2370	0/0:24,0:24:72.24:0,72,2158	0/0:19,0:19:54.19:0,54,1744	1/1:1,19:20:57.20:1258,57,0	1/1:0,26:26:69.24:1604,69,0	1/1:0,25:25:26.33:627,26,0	1/1:0,30:30:75.26:1741,75,0	0/0:18,0:18:54.17:0,54,1595	0/0:27,0:27:78.25:0,78,2305	1/1:0,16:16:45.15:1045,45,0	0/1:1,24:25:24.79:1493,0,25	1/1:0,33:34:96.33:2219,96,0	1/1:0,9:9:27.09:628,27,0
chr10	38617445	.	A	AT	13752.31	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-2.007;DP=667;FS=9.380;HRun=8;HaplotypeScore=76.7385;InbreedingCoeff=0.9696;MQ=67.71;MQ0=0;MQRankSum=-0.241;QD=28.65;ReadPosRankSum=1.607;VQSLOD=4.8085;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:55:99:0,155,1391	1/1:4,13:17:39.12:448,39,0	0/0:12,0:12:23.92:0,24,202	0/0:9,0:9:0.47:0,0,1	1/1:2,18:20:55.04:622,55,0	0/0:19,0:19:50.99:0,51,457	0/0:23,0:23:56.98:0,57,509	1/1:2,19:21:54.11:589,54,0	1/1:3,22:25:60.18:692,60,0	0/0:37,0:37:99:0,108,988	0/0:14,0:14:35.94:0,36,314	1/1:6,21:27:60.11:665,60,0	1/1:3,22:25:60.07:661,60,0	1/1:2,28:30:75.21:855,75,0	1/1:5,16:21:39.12:450,39,0	1/1:0,24:24:69.21:796,69,0	1/1:2,35:37:99:1212,105,0	0/0:18,0:18:53.91:0,54,476	1/1:5,25:30:50.71:798,51,0	1/1:1,27:28:81.24:930,81,0	1/1:2,21:23:60.13:677,60,0	1/1:1,15:16:45.13:519,45,0	1/1:5,13:18:36.11:415,36,0	1/1:1,27:28:72.21:831,72,0	1/1:2,18:20:39.06:433,39,0	1/1:2,26:28:78.23:900,78,0	1/1:3,23:26:66.14:739,66,0	1/1:0,16:16:45.13:519,45,0
chr10	38618171	.	G	GCA	3013.32	PASS	AB=0.907;AC=25;AF=0.446;AN=56;BaseQRankSum=9.082;DP=581;FS=0.000;HRun=0;HaplotypeScore=105.0464;InbreedingCoeff=0.1215;MQ=59.34;MQ0=13;MQRankSum=-1.896;QD=8.10;ReadPosRankSum=3.185;VQSLOD=2.9519;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:72.17:0,72,1027	0/1:5,0:11:8.44:88,0,8	0/0:19,0:6:16.35:0,16,130	0/0:16,0:4:6.04:0,6,37	0/1:11,6:17:43.56:275,0,44	0/0:17,0:17:51.09:0,51,695	0/0:39,0:39:99:0,108,1594	0/1:13,0:13:10.45:17,0,10	1/1:5,10:16:17.42:261,17,0	0/0:21,0:19:52.48:0,52,747	0/0:11,0:11:27.09:0,27,395	1/1:23,0:23:2.75:117,3,0	1/1:17,7:23:11.84:409,12,0	0/1:20,4:24:11.46:274,0,11	1/1:17,12:29:14.56:465,15,0	0/1:11,6:17:26.52:249,0,27	1/1:5,23:29:11.58:683,12,0	0/0:33,0:33:92.18:0,92,1383	0/1:20,0:18:11.73:39,0,12	0/1:9,0:9:13.39:13,0,19	0/1:41,0:40:21.28:21,0,79	1/1:6,0:5:2.61:12,3,0	0/0:13,0:13:2.99:0,3,25	0/1:32,0:32:10.21:51,0,10	1/1:19,0:19:12.68:59,13,0	0/1:20,0:20:45.64:46,0,56	0/1:22,0:22:19.75:113,0,20	0/0:11,0:11:5.66:0,6,38
chr10	38618173	.	G	GCGCACACACA	4068.63	PASS	AB=0.802;AC=23;AF=0.411;AN=56;BaseQRankSum=-2.555;DP=619;FS=2.427;HRun=0;HaplotypeScore=185.9434;InbreedingCoeff=0.4640;MQ=56.87;MQ0=13;MQRankSum=-5.176;QD=12.71;ReadPosRankSum=-6.477;VQSLOD=0.7342;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:30:45.47:0,45,1382	0/1:11,0:11:80.15:80,0,104	0/1:19,0:5:14.80:15,0,27	0/0:17,0:3:7.77:0,8,32	0/1:18,0:18:49.31:49,0,417	0/0:15,0:17:48.52:0,49,855	0/0:39,0:39:99:0,108,2111	1/1:13,0:14:36.34:385,36,0	0/0:17,0:17:32.19:0,32,235	0/0:20,0:20:49.67:0,50,1004	0/0:12,0:12:27.05:0,27,472	1/1:1,14:30:26.36:1046,26,0	0/0:25,0:24:18.34:0,18,377	0/0:25,0:25:29.58:0,30,463	0/1:31,0:31:45.84:46,0,396	0/0:15,0:15:16.57:0,17,307	0/0:31,0:31:55.23:0,55,409	0/0:33,0:34:51.22:0,51,1969	1/1:22,0:21:54.25:471,54,0	1/1:1,0:11:2.84:61,3,0	1/1:8,0:42:6.37:119,6,0	0/1:2,3:7:0:0,0,0	0/0:2,1:14:0.75:0,1,1	1/1:31,0:32:43.18:519,43,0	1/1:0,0:19:5.99:123,6,0	0/1:3,0:25:42.55:580,0,43	0/1:1,0:27:4.97:456,0,5	1/1:9,0:9:17.76:119,18,0
chr10	38619952	.	A	AT	4288.61	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=-11.559;DP=657;FS=9.428;HRun=10;HaplotypeScore=63.4233;InbreedingCoeff=0.9480;MQ=71.84;MQ0=0;MQRankSum=0.352;QD=22.34;ReadPosRankSum=0.600;VQSLOD=5.4888;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,117,961	1/1:1,7:8:21.05:224,21,0	0/1:21,0:19:1.05:1,0,138	0/0:16,1:14:14.19:0,14,113	1/1:7,23:30:69.13:724,69,0	0/0:11,0:11:29.97:0,30,246	0/0:20,0:20:50.90:0,51,411	0/0:37,0:39:93.95:0,94,749	1/1:3,19:22:32.95:511,33,0	0/0:27,0:27:68.88:0,69,563	0/0:20,0:20:53.93:0,54,443	0/0:21,0:21:47.94:0,48,394	1/1:3,19:22:51.07:523,51,0	1/1:2,16:19:48.10:502,48,0	1/1:1,22:23:57.14:608,57,0	1/1:1,14:15:39.10:416,39,0	1/1:3,28:31:57.96:780,58,0	0/0:25,0:29:74.03:0,74,560	0/0:22,0:22:44.93:0,45,367	0/0:26,0:26:71.92:0,72,591	0/0:15,0:15:29.95:0,30,246	0/0:29,0:28:71.88:0,72,588	0/0:32,0:32:83.90:0,84,690	0/0:13,0:13:32.95:0,33,271	0/0:23,0:23:59.89:0,60,490	0/0:27,0:27:68.91:0,69,567	0/0:28,0:28:71.88:0,72,588	0/0:19,0:20:49.94:0,50,400
chr10	38622087	.	T	TATC	6881.97	PASS	AB=0.556;AC=17;AF=0.304;AN=56;BaseQRankSum=-12.795;DP=637;FS=5.467;HRun=0;HaplotypeScore=87.0809;InbreedingCoeff=0.8761;MQ=77.62;MQ0=0;MQRankSum=0.531;QD=32.77;ReadPosRankSum=-1.074;VQSLOD=4.6584;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:75.17:0,75,1011	0/0:7,0:7:15.05:0,15,215	0/0:31,0:28:29.49:0,29,374	0/0:23,0:22:17.80:0,18,521	0/0:16,0:16:45.15:0,45,642	0/0:22,0:22:54.16:0,54,754	0/0:21,0:21:45.14:0,45,628	1/1:24,12:37:39.56:664,40,0	0/0:23,0:23:42.11:0,42,565	0/0:33,0:33:77.62:0,78,1068	0/0:13,0:13:33.01:0,33,428	0/0:36,0:36:69.16:0,69,931	0/0:22,0:22:42.12:0,42,567	0/0:19,0:19:48.13:0,48,666	0/0:24,0:24:66.21:0,66,925	0/0:20,0:20:51.17:0,51,729	0/0:24,0:24:22.01:0,22,697	0/0:16,0:17:42.13:0,42,601	1/1:9,2:11:6.02:122,6,0	1/1:7,21:29:60.20:1148,60,0	1/1:16,22:37:57.20:1158,57,0	1/1:5,15:20:45.15:890,45,0	0/0:18,0:18:51.14:0,51,691	0/0:23,0:23:45.15:0,45,644	1/1:5,11:16:33.11:668,33,0	1/1:5,22:27:26.28:1242,26,0	1/1:10,15:27:2.20:761,2,0	0/1:1,4:5:6.48:229,0,6
chr10	38622777	.	GA	G	560.52	PASS	AB=0.838;AC=17;AF=0.304;AN=56;BaseQRankSum=4.092;DP=453;FS=9.264;HRun=15;HaplotypeScore=73.3397;InbreedingCoeff=0.1542;MQ=56.50;MQ0=18;MQRankSum=-6.168;QD=3.24;ReadPosRankSum=3.141;VQSLOD=-0.2974;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,1:25:50.58:0,51,413	0/0:6,0:6:8.99:0,9,77	0/0:27,1:10:11.11:0,11,77	0/0:19,0:3:0.33:0,0,0	0/0:18,0:16:4.65:0,5,148	0/0:11,0:11:14.98:0,15,125	0/0:14,0:14:12:0,12,106	0/1:9,3:13:11.56:53,0,12	0/1:7,2:9:23.76:24,0,58	0/0:20,0:20:4.80:0,5,161	0/0:16,0:18:23.90:0,24,194	0/1:12,0:12:27.25:27,0,92	0/0:15,0:14:14.80:0,15,111	0/0:12,1:14:4.68:0,5,154	0/0:17,0:18:27.94:0,28,222	0/0:13,0:13:20.98:0,21,179	0/0:31,2:34:53.69:0,54,443	0/0:22,3:25:31.71:0,32,393	0/1:6,1:7:13.30:45,0,13	1/1:7,2:11:9.74:49,10,0	1/1:4,3:7:7.84:44,8,0	0/1:6,5:12:9.51:66,0,10	0/1:21,0:19:20.29:20,0,24	0/1:12,0:12:9.54:43,0,10	0/1:10,2:13:11.63:51,0,12	1/1:11,5:17:0.98:99,1,0	1/1:18,4:21:25.27:155,25,0	0/1:6,7:13:8.75:50,0,9
chr10	38624352	.	AC	A	350.31	PASS	AB=0.947;AC=7;AF=0.125;AN=56;BaseQRankSum=10.965;DP=726;FS=6.602;HRun=1;HaplotypeScore=93.9935;InbreedingCoeff=0.8677;MQ=74.93;MQ0=0;MQRankSum=-9.888;QD=5.00;ReadPosRankSum=0.221;VQSLOD=0.2285;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,111,1716	0/0:9,0:9:27.09:0,27,432	0/1:17,1:18:4.66:5,0,348	0/0:10,0:11:14.50:0,15,233	0/0:22,0:22:63.21:0,63,1004	0/0:36,0:36:99:0,108,1675	0/0:32,0:32:96.31:0,96,1506	0/0:28,0:28:84.28:0,84,1320	0/0:36,0:36:99:0,105,1653	0/0:35,0:34:99:0,105,1637	0/0:17,0:17:51.17:0,51,815	1/1:0,18:19:50.84:214,51,0	0/0:34,0:34:99:0,102,1606	0/0:33,0:33:96.32:0,96,1516	0/0:37,0:37:99:0,111,1772	0/0:27,0:27:81.28:0,81,1295	0/0:27,0:27:81.28:0,81,1289	0/0:17,0:17:51.17:0,51,804	0/0:25,0:25:75.26:0,75,1198	0/0:30,0:30:90.31:0,90,1436	0/0:45,0:45:99:0,135,2121	0/0:30,0:30:90.31:0,90,1437	1/1:2,17:19:43.09:190,43,0	1/1:2,12:14:21.99:86,22,0	0/0:21,0:21:63.20:0,63,984	0/0:29,0:29:87.30:0,87,1390	0/0:22,0:22:66.22:0,66,1048	0/0:15,0:15:45.15:0,45,719
chr10	38624354	.	AGG	A	645.69	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=11.552;DP=726;FS=5.434;HRun=2;HaplotypeScore=107.9293;InbreedingCoeff=0.8837;MQ=76.04;MQ0=0;MQRankSum=-10.602;QD=10.25;ReadPosRankSum=-0.226;VQSLOD=0.4151;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,105,2123	0/0:9,0:9:27.09:0,27,548	0/0:18,0:19:43.70:0,44,660	0/1:12,0:12:3.27:3,0,188	0/0:22,0:22:66.22:0,66,1306	0/0:36,0:36:99:0,108,2194	0/0:31,0:31:93.30:0,93,1853	0/0:28,0:28:84.27:0,84,1609	0/0:36,0:36:99:0,108,2142	0/0:36,0:35:99:0,102,2026	0/0:18,0:18:54.19:0,54,1088	1/1:1,18:19:55.82:340,56,0	0/0:34,0:34:99:0,102,2058	0/0:33,0:33:96.33:0,96,1949	0/0:36,0:36:99:0,108,2195	0/0:27,0:27:81.28:0,81,1636	0/0:27,0:27:81.26:0,81,1595	0/0:19,0:19:57.12:0,57,1059	0/0:25,0:25:75.26:0,75,1524	0/0:29,0:29:87.30:0,87,1768	0/0:43,0:43:99:0,129,2574	0/0:31,0:31:93.31:0,93,1844	1/1:1,17:18:50.83:298,51,0	1/1:2,12:14:26.02:148,26,0	0/0:21,0:21:63.22:0,63,1280	0/0:29,0:29:87.30:0,87,1763	0/0:23,0:23:69.20:0,69,1290	0/0:15,0:15:45.15:0,45,914
chr10	38624359	.	C	CA	308.02	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=11.168;DP=718;FS=12.023;HRun=0;HaplotypeScore=93.0449;InbreedingCoeff=0.9971;MQ=78.44;MQ0=0;MQRankSum=-10.454;QD=6.16;ReadPosRankSum=-0.678;VQSLOD=2.6293;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,99,1363	0/0:8,0:8:24.08:0,24,336	0/0:22,0:22:41.40:0,41,462	0/0:13,0:13:28.64:0,29,263	0/0:21,0:21:60.20:0,60,839	0/0:37,0:37:99:0,111,1535	0/0:28,0:28:84.28:0,84,1175	0/0:31,0:31:93.30:0,93,1287	0/0:39,0:39:99:0,114,1594	0/0:33,0:32:99:0,99,1373	0/0:19,0:19:54.18:0,54,754	1/1:3,18:21:36.72:205,37,0	0/0:33,0:33:99:0,99,1343	0/0:33,0:33:96.32:0,96,1339	0/0:34,0:34:99:0,102,1426	0/0:25,0:25:75.25:0,75,1049	0/0:28,0:28:78.25:0,78,1075	0/0:18,0:18:54.18:0,54,755	0/0:26,0:26:78.26:0,78,1091	0/0:29,0:29:87.28:0,87,1201	0/0:42,0:42:99:0,123,1686	0/0:28,0:28:81.26:0,81,1117	1/1:0,17:17:43.39:168,43,0	1/1:0,12:12:20.10:78,20,0	0/0:22,0:22:66.21:0,66,907	0/0:28,0:28:84.28:0,84,1175	0/0:21,0:21:63.21:0,63,881	0/0:15,0:15:45.15:0,45,629
chr10	38624360	.	CTG	C	880.68	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=11.406;DP=719;FS=15.219;HRun=0;HaplotypeScore=105.5892;InbreedingCoeff=0.9986;MQ=77.88;MQ0=0;MQRankSum=-10.408;QD=17.61;ReadPosRankSum=-0.944;VQSLOD=2.7997;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:93.30:0,93,1731	0/0:9,0:9:27.07:0,27,474	0/0:21,0:21:36.55:0,37,540	0/0:13,0:13:28.60:0,29,397	0/0:23,0:23:66.20:0,66,1209	0/0:38,0:38:99:0,114,2167	0/0:29,0:29:87.28:0,87,1635	0/0:31,0:31:93.32:0,93,1797	0/0:39,0:39:99:0,117,2259	0/0:34,0:33:99:0,99,1903	0/0:19,0:19:57.20:0,57,1087	1/1:3,18:21:60.37:468,60,0	0/0:32,0:32:96.33:0,96,1842	0/0:33,0:33:90.29:0,90,1702	0/0:34,0:34:99:0,99,1913	0/0:25,0:25:75.23:0,75,1384	0/0:28,0:28:84.29:0,84,1620	0/0:18,0:18:54.19:0,54,1042	0/0:26,0:26:75.26:0,75,1447	0/0:28,0:28:84.29:0,84,1595	0/0:42,0:42:99:0,126,2419	0/0:27,0:27:81.28:0,81,1551	1/1:0,17:17:47.58:364,48,0	1/1:0,12:12:24.14:191,24,0	0/0:22,0:22:63.22:0,63,1217	0/0:28,0:28:84.29:0,84,1623	0/0:21,0:21:63.22:0,63,1174	0/0:15,0:15:45.15:0,45,869
chr10	38624939	.	G	GC	6681.05	PASS	AB=0.533;AC=17;AF=0.304;AN=56;BaseQRankSum=-11.083;DP=636;FS=5.859;HRun=3;HaplotypeScore=68.4510;InbreedingCoeff=0.9203;MQ=89.28;MQ0=0;MQRankSum=-3.977;QD=33.07;ReadPosRankSum=-2.892;VQSLOD=3.9028;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:57.15:0,57,670	0/0:6,0:6:18.03:0,18,202	0/0:35,0:36:99:0,102,1168	0/0:21,0:21:37.19:0,37,600	0/0:20,0:20:39.11:0,39,467	0/0:29,0:29:66.17:0,66,765	0/0:26,0:26:75.22:0,75,889	1/1:3,23:26:63.17:845,63,0	0/0:29,0:29:72.20:0,72,851	0/0:20,0:20:51.15:0,51,612	0/0:19,0:19:45.13:0,45,540	0/0:17,0:17:45.14:0,45,540	0/0:26,0:26:75.23:0,75,900	0/0:21,0:21:60.18:0,60,720	0/0:16,0:16:42.13:0,42,504	0/0:25,0:25:72.20:0,72,841	0/0:36,0:36:99:0,105,1248	0/0:16,0:16:36.11:0,36,432	1/1:3,12:15:30.10:420,30,0	1/1:1,28:29:71.98:1008,72,0	1/1:4,21:25:69.21:934,69,0	1/1:3,23:26:60.19:825,60,0	0/0:23,0:23:57.17:0,57,684	0/0:24,0:24:72.21:0,72,853	1/1:1,17:18:45.15:628,45,0	0/1:3,21:24:11.17:678,0,11	1/1:2,23:24:57.19:798,57,0	1/1:0,14:14:39.13:546,39,0
chr10	38625799	.	TG	T	3590.47	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-3.307;DP=581;FS=6.338;HRun=10;HaplotypeScore=78.3511;InbreedingCoeff=0.9287;MQ=82.09;MQ0=0;MQRankSum=-0.853;QD=19.00;ReadPosRankSum=2.437;VQSLOD=4.6448;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,3:39:14.06:0,14,603	0/0:0,0:3:8.56:0,9,43	0/0:25,0:25:39.32:0,39,402	0/0:24,0:23:21.56:0,22,269	0/0:7,0:19:23.07:0,23,135	0/0:26,0:26:57.15:0,57,630	0/0:26,2:28:37.11:0,37,634	1/1:9,18:27:47.95:413,48,0	0/0:4,0:13:2.87:0,3,15	0/0:16,0:16:27.07:0,27,298	0/0:12,1:13:9.02:0,9,96	0/0:19,0:19:31.80:0,32,174	0/0:7,0:16:14.37:0,14,90	0/0:10,0:19:11.36:0,11,57	0/0:8,0:22:28.87:0,29,185	0/0:6,0:17:24.70:0,25,129	0/0:13,0:35:63.12:0,63,365	0/0:22,1:23:37.13:0,37,636	1/1:5,12:19:49.06:402,49,0	1/1:5,9:14:26.98:234,27,0	1/1:6,24:30:69.92:619,70,0	1/1:8,14:22:41.97:363,42,0	0/0:11,0:13:7.13:0,7,53	0/0:22,0:22:27.84:0,28,138	1/1:7,14:21:50.97:442,51,0	1/1:6,17:23:47.96:413,48,0	1/1:2,16:18:47.99:417,48,0	1/1:2,12:14:32.98:286,33,0
chr10	38628243	.	T	TATTC	5955.17	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-9.723;DP=565;FS=4.688;HRun=0;HaplotypeScore=123.4207;InbreedingCoeff=0.9713;MQ=65.23;MQ0=1;MQRankSum=5.270;QD=27.96;ReadPosRankSum=1.439;VQSLOD=4.8274;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:79.96:0,80,879	1/1:0,10:10:15.05:378,15,0	0/0:20,0:20:35.23:0,35,390	0/0:15,0:13:24.39:0,24,227	1/1:1,21:23:44.99:923,45,0	0/0:22,0:22:60.05:0,60,770	0/0:21,0:21:48.03:0,48,545	0/0:27,0:27:71.88:0,72,637	1/1:2,16:18:27.09:689,27,0	0/0:25,0:25:69.15:0,69,934	0/0:18,0:18:48.08:0,48,696	1/1:20,0:20:7.57:172,8,0	1/1:2,21:23:33.11:842,33,0	1/1:3,18:21:22.92:611,23,0	1/1:5,22:26:30.10:766,30,0	1/1:0,15:15:18.06:459,18,0	1/1:2,19:23:30.03:706,30,0	0/0:26,0:26:43.56:0,44,712	0/0:16,0:16:29.56:0,30,251	0/0:13,0:13:14.07:0,14,102	0/0:17,0:17:26.82:0,27,204	0/0:17,0:17:23.76:0,24,174	1/1:18,0:18:9.13:169,9,0	1/1:14,0:14:23.60:241,24,0	0/0:25,0:25:41.01:0,41,349	0/0:28,0:28:77.95:0,78,791	0/0:22,0:22:50.50:0,50,459	0/0:9,0:9:18.03:0,18,192
chr10	38628250	.	TCATACATACATA	T	5359.12	PASS	AC=18;AF=0.333;AN=54;BaseQRankSum=0.060;DP=564;FS=3.173;HRun=0;HaplotypeScore=200.3594;InbreedingCoeff=0.9449;MQ=63.36;MQ0=3;MQRankSum=-6.335;QD=31.34;ReadPosRankSum=-2.966;VQSLOD=4.1957;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:44.96:0,45,2421	0/0:10,0:10:17.09:0,17,809	./.	0/0:14,0:12:8.78:0,9,136	0/0:23,0:23:39.13:0,39,2077	0/0:22,0:22:45.15:0,45,2359	0/0:22,0:23:45.15:0,45,2242	1/1:27,0:25:12.04:241,12,0	0/0:18,0:18:33.11:0,33,1752	0/0:25,0:25:51.18:0,51,2831	0/0:20,0:20:51.18:0,51,2871	0/0:21,0:21:45.15:0,45,882	0/0:24,0:24:42.14:0,42,2252	0/0:26,0:25:38.85:0,39,1972	0/0:23,0:22:30.10:0,30,1599	0/0:17,0:17:24.08:0,24,1272	0/0:24,0:24:36.12:0,36,1738	0/0:26,0:27:54.19:0,54,2700	1/1:9,6:15:18.06:435,18,0	1/1:3,11:14:33.02:647,33,0	1/1:10,3:13:3.01:52,3,0	1/1:6,10:16:21.07:491,21,0	0/0:16,0:18:23.87:0,24,563	0/0:13,0:13:15.05:0,15,343	1/1:11,15:26:30.10:856,30,0	1/1:13,17:30:51.11:1469,51,0	1/1:12,9:21:24.08:755,24,0	1/1:2,7:9:12.04:413,12,0
chr10	38628253	.	TACA	T	570.94	PASS	AB=0.897;AC=8;AF=0.143;AN=56;BaseQRankSum=9.304;DP=564;FS=2.378;HRun=0;HaplotypeScore=127.0998;InbreedingCoeff=-0.1764;MQ=61.08;MQ0=5;MQRankSum=-4.148;QD=3.57;ReadPosRankSum=2.423;VQSLOD=2.2391;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:80.43:0,80,1474	0/0:9,0:9:17.09:0,17,242	0/0:16,0:14:42.12:0,42,515	0/0:13,0:10:24.07:0,24,306	0/1:23,0:23:9.80:10,0,658	0/0:23,0:23:69.23:0,69,1375	0/0:23,0:23:54.92:0,55,1135	0/0:27,0:24:72.23:0,72,929	0/0:20,0:20:39.13:0,39,677	0/0:25,0:25:75.25:0,75,1552	0/0:21,0:21:63.22:0,63,1438	0/1:9,11:20:61.34:310,0,61	0/0:23,0:23:42.14:0,42,720	0/0:23,1:23:13.54:0,14,742	0/0:24,0:23:36.12:0,36,588	0/0:17,0:17:24.08:0,24,415	0/0:25,0:25:36.05:0,36,533	0/0:27,0:27:81.27:0,81,1541	0/0:13,0:13:14.75:0,15,309	0/0:14,0:14:1.02:0,1,116	0/0:13,0:13:27.09:0,27,347	0/0:16,0:16:26.85:0,27,315	0/1:11,7:18:72.92:163,0,73	0/1:10,3:13:73.47:73,0,112	0/1:26,0:26:12.83:13,0,329	0/1:29,0:29:76.82:77,0,431	0/1:21,0:21:20.86:21,0,379	0/1:10,0:10:37.01:37,0,58
chr10	38628257	.	TA	T	146.16	PASS	AB=0.726;AC=3;AF=0.054;AN=56;BaseQRankSum=7.297;DP=558;FS=0.757;HRun=1;HaplotypeScore=112.3311;InbreedingCoeff=-0.0662;MQ=60.23;MQ0=5;MQRankSum=-0.446;QD=2.87;ReadPosRankSum=1.246;VQSLOD=-0.1490;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:78.11:0,78,1172	0/0:10,0:10:20.66:0,21,282	0/0:16,0:14:42.14:0,42,620	0/0:12,0:10:11.78:0,12,307	0/0:22,0:22:45.15:0,45,684	0/0:24,0:24:69.21:0,69,1059	0/0:24,0:24:63.67:0,64,951	0/0:29,0:26:74.98:0,75,1038	0/0:19,0:19:39.13:0,39,601	0/0:27,0:27:81.28:0,81,1270	0/0:21,0:21:63.20:0,63,981	0/1:10,11:21:99:160,0,159	0/0:24,0:24:45.15:0,45,681	0/0:21,1:21:27.43:0,27,635	0/0:23,0:22:42.13:0,42,621	0/0:17,0:17:30.08:0,30,437	0/0:22,0:22:36.11:0,36,511	0/0:28,0:28:81.28:0,81,1270	0/0:13,0:13:32.60:0,33,401	0/0:14,0:14:17.86:0,18,157	0/0:11,0:11:21.04:0,21,276	0/0:15,0:15:19.94:0,20,317	0/1:10,7:17:66.86:67,0,161	0/1:10,3:13:18.27:18,0,237	0/0:25,0:25:26.68:0,27,382	0/0:28,0:28:17.27:0,17,521	0/0:21,0:21:30.49:0,30,474	0/0:9,0:9:2.44:0,2,43
chr10	38628646	.	AC	A	15698.59	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=10.064;DP=732;FS=0.605;HRun=3;HaplotypeScore=81.1687;InbreedingCoeff=0.9990;MQ=101.21;MQ0=0;MQRankSum=-5.687;QD=31.84;ReadPosRankSum=5.295;VQSLOD=4.7664;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,157,2239	1/1:1,10:11:21.07:260,21,0	0/0:45,0:45:99:0,120,1628	0/0:35,0:36:92.39:0,92,1262	1/1:0,26:26:68.96:780,69,0	0/0:24,0:24:72.24:0,72,1037	0/0:24,0:24:72.24:0,72,1036	1/1:1,36:37:99:1278,105,0	1/1:1,25:26:72.23:892,72,0	0/0:28,0:28:84.27:0,84,1191	0/0:15,0:15:45.15:0,45,648	1/1:0,27:27:78.25:967,78,0	1/1:1,32:33:81.25:1004,81,0	1/1:0,23:23:60.19:743,60,0	1/1:1,29:30:84.26:1041,84,0	1/1:0,25:25:63.01:781,63,0	1/1:0,12:12:36.11:446,36,0	0/0:14,0:14:42.14:0,42,604	1/1:0,15:15:45.11:531,45,0	1/1:0,24:24:66.21:818,66,0	1/1:2,39:41:96.30:1190,96,0	1/1:0,20:20:51.12:615,51,0	1/1:1,15:16:36.04:446,36,0	1/1:0,26:26:69.22:855,69,0	1/1:0,21:21:51.16:632,51,0	1/1:2,30:32:25.34:1043,25,0	1/1:0,33:33:78.23:967,78,0	1/1:1,14:15:33.10:409,33,0
chr10	38629022	.	TTC	T	4877.07	PASS	AB=0.531;AC=7;AF=0.125;AN=56;BaseQRankSum=12.559;DP=746;FS=8.832;HRun=0;HaplotypeScore=88.6356;InbreedingCoeff=0.8323;MQ=64.86;MQ0=1;MQRankSum=-0.370;QD=37.52;ReadPosRankSum=1.332;VQSLOD=6.4237;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,57:56:99:2192,154,0	0/0:13,0:13:39.13:0,39,715	0/0:27,0:27:78.24:0,78,1318	0/0:24,0:23:59.99:0,60,1010	0/0:20,0:20:60.19:0,60,1069	0/0:19,0:19:54.15:0,54,929	0/0:17,0:17:48.16:0,48,880	0/0:30,0:30:87.29:0,87,1560	0/0:36,0:36:99:0,108,1968	1/1:0,38:38:99:1575,114,0	1/1:0,18:18:42.10:579,42,0	0/0:39,0:39:99:0,111,1985	0/0:19,0:19:54.18:0,54,990	0/0:19,0:19:54.17:0,54,958	0/0:24,0:24:69.24:0,69,1237	0/0:34,0:34:99:0,99,1736	0/0:46,0:46:99:0,117,2298	0/1:2,15:17:61.88:531,0,62	0/0:30,0:30:84.24:0,84,1467	0/0:26,0:26:75.26:0,75,1375	0/0:39,0:39:99:0,114,2078	0/0:25,0:25:75.24:0,75,1343	0/0:19,0:19:54.13:0,54,924	0/0:31,0:31:81.28:0,81,1484	0/0:29,0:29:87.30:0,87,1595	0/0:27,1:28:40.13:0,40,1362	0/0:17,0:17:48.15:0,48,831	0/0:5,0:5:15.03:0,15,244
chr10	38629220	.	A	ACATACATACATACATG	2030.84	PASS	AB=0.764;AC=6;AF=0.107;AN=56;BaseQRankSum=-2.112;DP=802;FS=3.974;HRun=0;HaplotypeScore=307.3549;InbreedingCoeff=0.6702;MQ=67.20;MQ0=1;MQRankSum=-4.478;QD=17.66;ReadPosRankSum=0.947;VQSLOD=1.7008;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,102,3363	0/0:15,0:15:42.10:0,42,1344	0/0:22,0:21:47.82:0,48,659	0/0:24,0:20:5.71:0,6,436	0/0:25,0:25:69.10:0,69,2299	0/0:28,0:28:83.92:0,84,2432	0/0:32,0:32:85.24:0,85,1763	0/0:26,0:26:72.14:0,72,1593	0/0:25,0:25:75.10:0,75,2150	0/0:40,0:40:99:0,114,3444	0/0:30,0:30:84:0,84,2297	1/1:1,21:42:21.02:1647,21,0	0/0:33,0:33:99:0,99,2939	0/0:21,0:21:63.13:0,63,1985	0/0:34,0:34:99:0,99,3454	0/0:28,0:28:81.14:0,81,2157	0/0:40,0:40:99:0,108,2952	0/1:16,0:16:32.25:32,0,1413	0/0:19,0:17:47.93:0,48,1034	0/0:31,0:31:84.17:0,84,2381	0/0:41,0:41:99:0,114,3063	0/0:34,0:34:96.16:0,96,3125	1/1:1,13:28:5.87:470,6,0	0/1:3,9:29:0.07:0,0,0	0/0:27,0:27:75.13:0,75,2583	0/0:30,0:30:90.16:0,90,3081	0/0:24,0:24:69.15:0,69,2269	0/0:17,0:17:45.09:0,45,1686
chr10	38631170	.	TC	T	1938.92	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.524;DP=691;FS=2.393;HRun=3;HaplotypeScore=65.6226;InbreedingCoeff=0.9938;MQ=87.25;MQ0=0;MQRankSum=-2.216;QD=32.32;ReadPosRankSum=1.856;VQSLOD=4.1052;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:56:99:0,166,2309	0/0:5,0:5:15.05:0,15,215	0/0:30,0:30:90.22:0,90,1200	0/0:22,0:22:63.20:0,63,886	0/0:12,0:12:33.11:0,33,475	0/0:24,0:24:60.19:0,60,845	0/0:31,0:31:93.29:0,93,1300	0/0:28,0:28:75.23:0,75,1045	0/0:15,0:15:45.15:0,45,648	0/0:19,0:19:57.18:0,57,796	0/0:22,0:22:66.22:0,66,944	1/1:0,23:23:66.21:818,66,0	0/0:22,0:22:63.18:0,63,861	0/0:24,0:24:72.24:0,72,1029	0/0:21,0:21:51.17:0,51,735	0/0:16,0:16:45.15:0,45,643	0/0:50,0:50:99:0,144,2068	0/0:16,0:16:48.16:0,48,691	0/0:45,0:45:99:0,129,1856	0/0:24,0:24:72.23:0,72,1010	0/0:59,0:59:99:0,175,2482	0/0:10,0:10:27.09:0,27,388	1/1:0,16:16:45.14:557,45,0	1/1:1,20:21:57.18:706,57,0	0/0:25,0:25:72.24:0,72,1037	0/0:27,0:27:81.27:0,81,1167	0/0:17,0:16:51.16:0,51,716	0/0:11,0:11:33.11:0,33,471
chr10	38631992	.	TA	T	1755.84	PASS	AB=0.754;AC=18;AF=0.321;AN=56;BaseQRankSum=7.326;DP=567;FS=12.048;HRun=14;HaplotypeScore=61.6579;InbreedingCoeff=0.5575;MQ=68.25;MQ0=0;MQRankSum=0.389;QD=8.82;ReadPosRankSum=1.785;VQSLOD=1.7149;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,2:41:74.60:0,75,782	0/0:7,0:7:12:0,12,108	0/0:16,0:12:7.22:0,7,49	0/1:6,0:6:12.67:13,0,15	0/0:21,1:27:21.18:0,21,333	0/0:24,0:24:45.89:0,46,403	0/0:23,2:26:21.70:0,22,460	0/1:7,23:32:38.66:303,0,39	0/0:15,2:17:18.44:0,18,306	0/0:21,1:22:9.40:0,9,219	0/0:18,0:20:41.03:0,41,339	0/1:9,3:12:14.22:14,0,150	0/0:14,0:14:29.94:0,30,265	0/0:9,2:12:4.17:0,4,125	0/0:22,0:22:44.95:0,45,399	0/0:11,1:14:9.10:0,9,196	0/0:35,4:39:4.67:0,5,582	0/0:22,7:31:10.05:0,10,478	0/1:10,11:21:17.15:186,0,17	1/1:3,16:20:40.55:267,41,0	1/1:3,17:21:43.65:292,44,0	1/1:6,14:22:34.33:232,34,0	0/0:18,1:19:9.43:0,9,222	0/0:15,0:17:27.59:0,28,226	1/1:6,16:22:38.64:266,39,0	1/1:11,10:21:1.64:149,2,0	1/1:2,8:10:17.83:122,18,0	1/1:5,7:12:14.79:103,15,0
chr10	38633433	.	A	AT	2979.82	PASS	AB=0.572;AC=18;AF=0.321;AN=56;BaseQRankSum=-2.506;DP=607;FS=2.178;HRun=12;HaplotypeScore=77.6976;InbreedingCoeff=0.7172;MQ=70.16;MQ0=10;MQRankSum=-0.972;QD=13.73;ReadPosRankSum=2.459;VQSLOD=4.2961;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:40:97.58:0,98,679	1/1:2,6:9:15.02:146,15,0	0/0:21,0:11:6.05:0,6,57	0/0:24,1:17:14.01:0,14,88	0/1:7,19:30:9.89:376,0,10	0/0:17,0:18:25.82:0,26,179	0/0:19,1:22:16.69:0,17,267	0/0:32,0:32:29.90:0,30,370	1/1:5,17:23:16.99:313,17,0	0/0:24,1:26:16.12:0,16,350	0/0:11,0:11:21.73:0,22,156	1/1:4,13:17:14.09:289,14,0	1/1:7,12:21:25.80:369,26,0	1/1:8,10:19:5.38:218,5,0	0/1:5,16:21:8.55:234,0,9	0/0:18,0:16:41.75:0,42,305	1/1:11,22:37:27.39:521,27,0	0/0:20,0:21:46.75:0,47,334	0/0:21,2:26:3.44:0,3,311	0/0:14,0:14:32.74:0,33,240	0/0:11,0:12:25.86:0,26,181	0/0:14,0:14:35.77:0,36,263	1/1:3,11:17:10.69:215,11,0	1/1:4,19:23:0.39:489,0,0	0/0:24,0:24:56.65:0,57,416	0/0:30,1:31:7.61:0,8,346	0/0:17,3:20:12.54:0,13,255	0/0:11,0:10:23.85:0,24,175
chr10	38635277	.	C	CA	620.05	PASS	AB=0.979;AC=15;AF=0.268;AN=56;BaseQRankSum=1.324;DP=674;FS=0.507;HRun=14;HaplotypeScore=137.2920;InbreedingCoeff=0.1448;MQ=59.14;MQ0=34;MQRankSum=-4.401;QD=2.66;ReadPosRankSum=-0.814;VQSLOD=0.6959;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:14.67:0,15,209	0/0:4,0:4:8.85:0,9,57	0/0:84,0:16:6.53:0,7,45	0/0:90,0:29:13.80:0,14,81	0/0:25,0:26:41.27:0,41,286	0/1:22,0:21:7.91:8,0,134	0/0:15,0:15:23.01:0,23,151	0/0:26,0:26:43.50:0,44,286	0/1:17,0:16:0.44:0,0,111	0/1:19,0:18:5.24:5,0,178	0/1:16,2:17:59.66:60,0,84	1/1:13,6:15:41.62:326,42,0	0/1:11,0:12:28.81:29,0,46	0/1:13,0:14:13.95:14,0,103	0/1:17,0:18:56.49:56,0,81	0/0:8,0:8:17.39:0,17,99	0/1:29,0:28:7.87:8,0,203	0/1:24,1:24:12.42:12,0,122	0/0:23,0:22:54.85:0,55,349	0/0:25,0:25:64.90:0,65,422	0/0:14,0:12:32.51:0,33,211	0/0:17,0:17:47.28:0,47,305	1/1:6,9:17:1.02:145,1,0	1/1:13,9:23:9.87:113,10,0	0/0:27,0:27:67.89:0,68,441	0/0:25,0:25:54.86:0,55,350	0/0:24,0:24:39.62:0,40,252	0/0:4,0:4:11.81:0,12,76
chr10	38635308	.	G	GA	2594.79	PASS	AB=0.819;AC=17;AF=0.304;AN=56;BaseQRankSum=-1.729;DP=615;FS=0.416;HRun=10;HaplotypeScore=105.8527;InbreedingCoeff=0.6663;MQ=66.52;MQ0=10;MQRankSum=0.153;QD=12.36;ReadPosRankSum=1.932;VQSLOD=3.3709;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:23:53.26:0,53,439	1/1:0,7:7:15.04:160,15,0	0/0:55,0:20:25.03:0,25,165	0/1:54,0:20:3.80:4,0,25	1/1:8,16:24:14.86:336,15,0	0/0:22,0:22:22.13:0,22,309	0/0:24,0:24:59.91:0,60,490	0/0:25,0:25:50.66:0,51,406	1/1:2,13:14:32.98:336,33,0	0/0:14,0:14:29.92:0,30,242	0/0:14,0:15:11.75:0,12,166	0/0:23,0:20:49.73:0,50,377	1/1:5,7:12:1.24:203,1,0	0/1:6,12:18:16.86:200,0,17	1/1:4,15:19:37.13:367,37,0	1/1:4,7:11:29.02:273,29,0	1/1:6,28:33:62.58:871,63,0	0/0:16,0:15:35.86:0,36,290	0/0:29,0:28:71.89:0,72,591	0/0:22,1:24:26.89:0,27,410	0/1:10,2:10:34.03:34,0,163	0/0:15,0:16:34.92:0,35,266	0/0:17,0:17:0.19:0,0,168	0/0:20,0:20:41.91:0,42,340	0/0:25,0:25:62.77:0,63,502	0/0:29,0:29:59.87:0,60,491	0/0:16,0:16:5.77:0,6,242	0/0:10,0:10:29.97:0,30,246
chr10	38635817	.	GT	G	2709.50	PASS	AB=0.796;AC=23;AF=0.411;AN=56;BaseQRankSum=8.844;DP=510;FS=5.457;HRun=11;HaplotypeScore=62.3938;InbreedingCoeff=0.7926;MQ=77.40;MQ0=1;MQRankSum=-1.409;QD=14.73;ReadPosRankSum=3.938;VQSLOD=4.1880;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,1:29:50.55:0,51,743	1/1:1,7:8:17.98:148,18,0	0/0:35,0:27:1.38:0,1,257	0/0:21,0:17:12.49:0,12,118	1/1:3,18:21:50.89:413,51,0	0/0:18,0:18:48.56:0,49,477	0/0:14,0:14:31.05:0,31,361	0/0:31,0:32:81.03:0,81,838	1/1:1,9:10:20.96:172,21,0	0/0:19,1:21:19.59:0,20,432	0/1:9,1:11:3.76:4,0,147	1/1:1,10:11:26.96:222,27,0	1/1:1,13:15:37.89:301,38,0	1/1:4,12:16:35.95:295,36,0	1/1:1,13:16:40.03:307,40,0	0/1:1,9:11:2.98:174,0,3	1/1:1,16:20:48.06:362,48,0	0/1:16,1:18:6.50:7,0,323	0/0:25,0:25:33.29:0,33,468	0/0:25,1:26:32.50:0,33,551	0/0:8,0:8:12.03:0,12,127	0/0:19,0:19:39.10:0,39,415	1/1:3,12:15:32.82:271,33,0	1/1:0,12:12:29.97:246,30,0	0/0:18,0:18:30.87:0,31,404	0/0:21,0:21:48.12:0,48,511	0/0:23,0:23:66.17:0,66,703	0/0:14,0:15:11.49:0,11,311
chr10	38636756	.	TC	T	2739.02	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=6.553;DP=695;FS=3.405;HRun=2;HaplotypeScore=72.5888;InbreedingCoeff=0.9981;MQ=85.66;MQ0=0;MQRankSum=-0.472;QD=35.12;ReadPosRankSum=4.561;VQSLOD=4.2180;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,141,1976	0/0:7,0:7:21.06:0,21,297	0/0:21,0:22:66.21:0,66,934	0/0:28,0:28:72.24:0,72,1051	0/0:21,0:21:57.17:0,57,813	0/0:29,0:29:81.25:0,81,1172	0/0:23,0:23:66.20:0,66,964	0/0:32,0:32:96.30:0,96,1377	0/0:26,0:26:78.16:0,78,1044	0/0:18,0:18:54.18:0,54,794	0/0:18,0:18:51.10:0,51,661	1/1:0,26:26:72.23:935,72,0	0/0:25,0:25:75.17:0,75,1023	0/0:24,0:24:72.21:0,72,1009	0/0:39,0:39:99:0,117,1695	0/0:28,0:28:84.27:0,84,1223	0/0:26,0:26:75.22:0,75,1064	0/0:26,0:26:72.21:0,72,1037	0/0:18,0:18:54.14:0,54,718	0/0:18,0:18:45.15:0,45,674	0/0:44,0:44:99:0,120,1797	0/0:26,0:26:75.17:0,75,1009	1/1:1,16:17:45.15:584,45,0	1/1:0,35:35:99:1363,105,0	0/0:11,0:11:33.08:0,33,422	0/0:18,0:18:54.17:0,54,773	0/0:32,0:32:96.31:0,96,1419	0/0:10,0:10:27.09:0,27,405
chr10	38637295	.	G	GAA	2056.42	PASS	AB=0.642;AC=19;AF=0.339;AN=56;BaseQRankSum=3.960;DP=642;FS=3.687;HRun=12;HaplotypeScore=86.0370;InbreedingCoeff=0.7333;MQ=56.93;MQ0=7;MQRankSum=1.163;QD=10.39;ReadPosRankSum=-0.881;VQSLOD=2.1213;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:63,0:65:99:0,138,1310	0/1:4,5:6:17.36:57,0,17	0/0:14,0:12:24.98:0,25,179	0/0:14,0:7:12.12:0,12,61	1/1:6,10:16:28.87:298,29,0	0/0:27,0:27:40.01:0,40,507	0/0:18,0:23:38.40:0,38,419	0/0:32,0:27:21.38:0,21,309	1/1:2,4:8:11.53:135,12,0	0/0:24,0:24:59.76:0,60,532	0/0:13,0:16:29.45:0,29,243	0/1:8,1:16:18.27:108,0,18	1/1:5,6:9:16.86:197,17,0	1/1:2,9:11:11.53:135,12,0	1/1:11,4:17:37.40:343,37,0	0/1:9,13:23:87.51:111,0,88	1/1:3,31:36:56.16:732,56,0	0/0:22,0:24:46.25:0,46,498	0/0:16,0:17:41.68:0,42,363	0/0:34,0:34:55.08:0,55,577	0/0:27,0:27:51.57:0,52,497	0/0:20,0:17:29.78:0,30,264	1/1:8,0:19:7.88:27,8,0	1/1:11,0:21:34.63:120,35,0	0/0:21,0:23:44.37:0,44,383	0/0:33,0:33:82.82:0,83,691	0/0:15,0:17:39.06:0,39,342	0/0:22,0:24:52.90:0,53,434
chr10	38637394	.	CTGTGTGTCTCTG	C	3140.75	PASS	AB=0.931;AC=14;AF=0.259;AN=54;BaseQRankSum=-4.398;DP=886;FS=9.777;HRun=0;HaplotypeScore=246.5780;InbreedingCoeff=0.7782;MQ=45.63;MQ0=60;MQRankSum=-0.440;QD=17.64;ReadPosRankSum=0.605;VQSLOD=1.1610;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:47:99:0,105,2832	1/1:9,0:7:12.04:355,12,0	0/0:38,0:25:53.56:0,54,1194	0/0:58,0:29:65.44:0,65,1360	./.	0/0:28,0:27:51.92:0,52,1410	0/0:49,0:50:99:0,126,3117	0/0:45,0:35:90.24:0,90,1903	1/1:23,0:11:12.04:277,12,0	0/0:44,0:38:82.59:0,83,2586	0/0:30,0:25:39.13:0,39,1110	0/0:30,0:24:24.05:0,24,300	1/1:17,0:9:14.76:281,15,0	1/1:15,0:13:15.05:503,15,0	1/1:29,0:23:9.02:226,9,0	1/1:24,0:15:27.04:690,27,0	0/1:24,0:22:0.28:929,0,0	0/0:33,0:33:90.26:0,90,2482	0/0:40,0:30:26.96:0,27,1126	0/0:37,0:34:16.82:0,17,565	0/0:40,0:39:2.93:0,3,543	0/0:29,0:22:6.82:0,7,49	0/0:27,0:23:29.73:0,30,419	0/1:32,0:32:59.21:59,0,379	0/0:22,0:18:26.50:0,26,535	0/0:41,0:35:50.75:0,51,1900	0/0:26,0:23:18.53:0,19,588	0/0:11,0:8:18.04:0,18,370
chr10	38637398	.	G	GTC	1439.89	PASS	AB=0.788;AC=13;AF=0.241;AN=54;BaseQRankSum=4.067;DP=910;FS=9.124;HRun=0;HaplotypeScore=157.5998;InbreedingCoeff=0.8063;MQ=42.38;MQ0=81;MQRankSum=0.908;QD=9.80;ReadPosRankSum=5.355;VQSLOD=2.3958;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:50:99:0,108,1621	1/1:4,5:7:12.04:203,12,0	0/0:36,0:22:56.78:0,57,811	0/0:60,0:30:67.60:0,68,857	./.	0/0:27,0:27:51.38:0,51,759	0/0:49,0:49:99:0,129,1878	0/0:47,0:35:97.11:0,97,1338	0/1:19,7:12:30.02:114,0,30	0/0:43,0:37:99:0,100,1451	0/0:33,0:26:39.13:0,39,596	0/0:33,0:25:24.95:0,25,342	1/1:8,8:9:14.95:178,15,0	1/1:9,9:14:15.04:255,15,0	1/1:19,12:24:5.95:102,6,0	1/1:13,8:12:3.20:288,3,0	1/1:11,14:22:28.69:473,29,0	0/0:35,0:34:90.28:0,90,1345	0/0:42,0:28:69.10:0,69,1000	0/0:35,0:31:39.11:0,39,553	0/0:40,0:36:29.87:0,30,426	0/0:31,0:22:6.02:0,6,75	0/0:28,0:23:31.34:0,31,458	0/0:36,0:32:41.67:0,42,606	0/0:23,0:18:30.09:0,30,430	0/0:48,0:38:99:0,107,1494	0/0:26,0:23:36.11:0,36,499	0/0:10,0:7:18.06:0,18,262
chr10	38637404	.	CTG	C	1957.96	PASS	AB=0.949;AC=19;AF=0.352;AN=54;BaseQRankSum=2.806;DP=973;FS=8.474;HRun=0;HaplotypeScore=151.4245;InbreedingCoeff=0.0791;MQ=37.90;MQ0=130;MQRankSum=-1.194;QD=3.88;ReadPosRankSum=-4.134;VQSLOD=0.8989;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:66,0:58:99:0,102,1553	0/0:8,0:5:9.49:0,9,31	0/0:34,0:18:39.11:0,39,581	0/0:56,0:24:40.83:0,41,595	./.	0/0:29,0:28:48.60:0,49,816	0/0:49,0:48:99:0,108,1749	0/1:50,0:31:99:161,0,214	0/1:26,0:12:4.64:35,0,5	0/0:53,0:40:79.73:0,80,1439	0/0:38,0:27:42.09:0,42,635	1/1:24,12:26:18.94:244,19,0	0/0:19,1:10:7.06:0,7,34	0/0:22,0:14:4.31:0,4,10	0/0:31,0:21:1.77:0,2,4	0/1:21,0:12:20.81:21,0,50	0/1:24,1:22:0.79:1,0,53	0/0:35,0:34:84.20:0,84,1342	0/1:38,1:24:98.73:99,0,197	0/1:39,1:31:72.58:97,0,73	0/1:33,8:36:64.99:206,0,65	1/1:33,4:23:1.88:39,2,0	1/1:12,14:21:20.89:210,21,0	1/1:18,19:31:45.81:542,46,0	0/1:21,3:19:62.84:63,0,77	0/1:48,5:38:99:340,0,356	0/1:36,1:29:44.01:44,0,131	0/1:9,1:7:26.19:26,0,79
chr10	38637410	.	GTCTCTC	G	3830.31	PASS	AB=0.977;AC=19;AF=0.352;AN=54;BaseQRankSum=8.441;DP=1054;FS=17.238;HRun=0;HaplotypeScore=174.0426;InbreedingCoeff=0.2866;MQ=34.84;MQ0=202;MQRankSum=-3.525;QD=7.45;ReadPosRankSum=0.592;VQSLOD=1.8631;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:63,0:57:99:0,104,2478	0/0:8,0:6:6.69:0,7,16	0/0:28,0:12:33.11:0,33,589	0/0:54,0:21:20.05:0,20,463	./.	0/0:30,0:29:51.63:0,52,1279	0/0:45,0:44:99:0,102,2330	1/1:34,22:27:63.17:980,63,0	0/0:23,0:10:3.59:0,4,37	0/0:52,0:36:94.50:0,94,2112	0/0:39,0:28:39.12:0,39,852	0/0:40,0:27:23.25:0,23,296	0/0:23,0:11:15.77:0,16,130	1/1:24,0:14:4.39:10,4,0	1/1:32,0:21:1.77:4,2,0	0/0:25,0:14:3.22:0,3,36	0/0:26,0:23:2.66:0,3,71	0/0:35,0:34:78.18:0,78,1954	0/1:43,1:22:87.76:484,0,88	0/1:46,2:31:2.83:204,0,3	1/1:39,0:34:21.53:431,22,0	1/1:38,4:24:1.88:39,2,0	0/1:33,0:24:14.42:14,0,103	0/1:40,0:33:99:103,0,355	1/1:31,0:18:18.02:194,18,0	0/1:57,5:39:99:926,0,280	0/1:47,0:33:73.18:420,0,73	0/1:11,0:6:20.86:21,0,25
chr10	38637414	.	C	CTGTG	3781.79	PASS	AB=0.843;AC=9;AF=0.167;AN=54;BaseQRankSum=4.700;DP=1073;FS=10.768;HRun=0;HaplotypeScore=159.4296;InbreedingCoeff=0.0276;MQ=34.08;MQ0=226;MQRankSum=-6.550;QD=11.03;ReadPosRankSum=-1.074;VQSLOD=2.6039;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:66,0:58:99:0,102,1898	0/0:9,0:6:12.51:0,13,198	0/0:25,0:11:33.11:0,33,616	0/0:52,0:19:38.66:0,39,558	./.	0/0:32,0:30:54.08:0,54,995	0/0:48,0:44:99:0,102,1980	1/1:50,5:25:63.18:946,63,0	0/0:25,0:9:9.02:0,9,132	0/0:61,0:36:99:0,99,1798	0/0:41,0:29:42.12:0,42,732	0/0:40,0:27:24.08:0,24,414	0/0:24,0:11:14.94:0,15,160	0/0:23,0:14:14.97:0,15,294	0/0:31,0:20:6.02:0,6,118	0/0:24,0:14:20.84:0,21,335	0/0:29,0:25:31.58:0,32,532	0/0:33,0:30:78.25:0,78,1502	0/1:37,3:21:99:491,0,235	0/1:38,10:30:85.03:233,0,85	0/1:32,7:33:29.70:147,0,30	0/0:37,5:24:3.01:0,3,36	0/0:36,0:23:14.28:0,14,214	0/0:46,0:35:37.36:0,37,555	0/1:28,3:19:76.13:189,0,76	0/1:54,8:37:99:1196,0,514	0/1:40,2:32:99:505,0,120	0/1:8,3:5:30.47:75,0,30
chr10	38637480	.	GTC	G	58.97	PASS	AB=0.922;AC=3;AF=0.065;AN=46;BaseQRankSum=2.972;DP=1191;FS=0.000;HRun=0;HaplotypeScore=89.9474;InbreedingCoeff=0.3461;MQ=29.94;MQ0=455;MQRankSum=1.326;QD=0.61;ReadPosRankSum=-0.534;VQSLOD=1.3253;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:97,1:74:99:0,117,1667	0/0:5,0:2:0.47:0,0,1	0/0:27,0:9:16.77:0,17,237	0/0:48,0:14:23.03:0,23,289	./.	0/0:43,0:33:42.11:0,42,633	0/0:52,1:41:75.25:0,75,1261	./.	0/0:28,0:5:3:0,3,25	0/0:55,0:28:72.54:0,73,1026	0/0:40,0:29:75.23:0,75,1193	0/1:43,4:28:26.65:27,0,29	0/0:19,0:7:8.81:0,9,53	0/0:19,0:8:5.94:0,6,43	./.	./.	0/0:20,0:14:4.36:0,4,31	0/0:39,0:32:72.12:0,72,1113	0/0:87,0:11:8.72:0,9,70	0/0:45,0:15:2.88:0,3,15	0/0:35,0:20:0:0,0,0	./.	1/1:49,1:22:10.29:126,10,0	0/0:60,3:31:11.78:0,12,102	0/0:25,1:8:2.30:0,2,25	0/0:65,0:19:20.89:0,21,185	0/0:38,0:18:8.29:0,8,47	0/0:16,0:12:6:0,6,71
chr10	38637532	.	CTG	C	99.65	PASS	AB=0.928;AC=8;AF=0.190;AN=42;BaseQRankSum=4.462;DP=831;FS=34.668;HRun=0;HaplotypeScore=78.4937;InbreedingCoeff=0.2793;MQ=36.53;MQ0=159;MQRankSum=-2.200;QD=0.52;ReadPosRankSum=-2.083;VQSLOD=-0.5557;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:87,2:76:99:0,105,1574	./.	0/0:28,0:5:11.73:0,12,96	0/0:53,0:21:26.83:0,27,351	./.	0/0:45,0:32:13.28:0,13,340	0/0:42,0:35:58.82:0,59,832	0/0:23,0:6:2.60:0,3,27	0/1:21,0:5:0:0,0,0	0/0:52,0:41:80.81:0,81,1735	0/0:35,0:30:78.21:0,78,1214	0/0:27,2:13:7.51:0,8,51	./.	0/0:12,0:7:3:0,3,26	./.	0/1:18,0:8:0:0,0,0	0/0:18,0:9:5.04:0,5,36	0/0:46,0:35:78.19:0,78,1138	0/0:16,0:4:3.01:0,3,31	./.	1/1:36,2:20:2.99:23,3,0	./.	0/1:36,2:25:61.43:61,0,144	0/1:47,10:29:14.33:102,0,14	./.	0/0:30,0:17:12.98:0,13,205	1/1:12,1:4:2.92:17,3,0	0/0:17,0:13:3:0,3,28
chr10	38637538	.	GTGTCTC	G	57.71	PASS	AB=0.976;AC=7;AF=0.159;AN=44;BaseQRankSum=4.333;DP=903;FS=24.414;HRun=0;HaplotypeScore=97.6201;InbreedingCoeff=0.0909;MQ=34.91;MQ0=216;MQRankSum=-1.257;QD=0.26;ReadPosRankSum=-0.837;VQSLOD=0.2726;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:90,4:75:99:0,108,3057	./.	0/0:24,0:5:12.37:0,12,178	0/0:45,0:18:29.37:0,29,633	./.	0/0:43,0:31:35.31:0,35,422	0/0:38,9:33:62.46:0,62,1231	0/0:28,0:6:8.70:0,9,104	0/0:26,0:7:3.01:0,3,39	0/0:53,0:40:41.43:0,41,3431	0/0:34,0:29:78.23:0,78,2500	0/1:32,0:15:23.48:23,0,157	./.	0/0:16,0:7:5.75:0,6,91	./.	0/1:26,0:13:0:0,0,0	0/0:18,0:10:6.02:0,6,76	0/0:47,0:34:76.71:0,77,2354	0/0:20,0:4:3.01:0,3,85	./.	0/1:39,4:19:30.43:30,0,35	./.	0/1:45,0:26:41.98:42,0,339	0/1:55,2:28:59.70:60,0,117	0/0:10,0:5:0:0,0,0	0/0:35,0:18:31.48:0,31,632	1/1:15,0:5:2.50:9,2,0	0/0:19,0:14:3.90:0,4,84
chr10	38637588	.	GTCTC	G	34.52	PASS	AB=0.962;AC=6;AF=0.143;AN=42;BaseQRankSum=3.339;DP=1582;FS=0.000;HRun=0;HaplotypeScore=53.5455;InbreedingCoeff=0.1807;MQ=16.42;MQ0=967;MQRankSum=-3.107;QD=0.11;ReadPosRankSum=-0.935;VQSLOD=1.3182;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:94,1:37:23.78:0,24,564	0/0:13,0:2:3.01:0,3,68	./.	./.	./.	0/0:47,0:15:11.10:0,11,282	0/0:68,0:15:15.02:0,15,202	./.	0/0:87,0:10:3.01:0,3,75	0/0:65,0:18:48.07:0,48,979	0/0:26,0:10:12:0,12,254	0/1:52,4:10:17.99:45,0,18	0/0:73,0:11:0.89:0,1,2	0/0:67,0:13:5.89:0,6,92	0/0:84,5:25:0.39:0,0,1	1/1:63,4:17:3.01:49,3,0	0/1:75,0:11:19:24,0,19	0/0:58,0:22:20.34:0,20,619	./.	0/0:46,0:9:1.25:0,1,3	0/1:77,0:16:17.88:18,0,71	./.	0/0:58,0:20:6.02:0,6,126	0/0:89,3:21:11.92:0,12,235	0/1:38,0:12:0:1,0,0	0/0:72,1:15:32.97:0,33,640	./.	0/0:27,0:4:2.74:0,3,12
chr10	38637604	.	GTCTC	G	49.77	PASS	AB=0.971;AC=9;AF=0.214;AN=42;BaseQRankSum=3.160;DP=1867;FS=0.000;HRun=0;HaplotypeScore=55.4774;InbreedingCoeff=0.2660;MQ=14.92;MQ0=1153;MQRankSum=-1.932;QD=0.10;ReadPosRankSum=1.029;VQSLOD=0.9743;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:105,1:26:12.03:0,12,228	0/0:20,0:3:3.01:0,3,56	./.	./.	./.	0/0:58,1:17:3.34:0,3,48	0/1:79,1:9:0:0,0,0	./.	./.	0/0:61,0:13:26.68:0,27,459	0/1:36,0:9:0:0,0,0	1/1:63,3:12:6.01:76,6,0	./.	0/1:85,1:21:21.13:21,0,30	0/1:110,3:28:0:0,0,0	1/1:86,0:29:3.01:49,3,0	0/0:100,1:20:2.08:0,2,16	0/0:61,0:18:20.87:0,21,291	0/0:62,0:3:2.80:0,3,34	0/0:57,0:10:2.98:0,3,21	0/0:90,0:17:3.01:0,3,34	./.	0/0:54,8:17:3:0,3,27	0/0:112,4:26:2.98:0,3,25	0/1:41,0:11:0:1,0,0	0/0:88,0:13:21.06:0,21,376	0/0:49,0:5:3.89:0,4,34	0/0:36,0:6:3.01:0,3,49
chr10	38637612	.	CTCTG	C	68.62	PASS	AB=0.998;AC=12;AF=0.273;AN=44;BaseQRankSum=4.117;DP=2059;FS=6.687;HRun=0;HaplotypeScore=63.2532;InbreedingCoeff=-0.0401;MQ=15.24;MQ0=1197;MQRankSum=-2.439;QD=0.08;ReadPosRankSum=-0.855;VQSLOD=0.4836;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:117,0:28:9.01:0,9,160	0/0:25,0:3:3.01:0,3,37	./.	./.	./.	0/1:57,0:12:6:6,0,18	0/1:76,0:8:0:0,0,0	./.	./.	0/0:63,0:12:14.08:0,14,359	./.	0/1:87,0:20:47.76:48,0,83	0/0:105,0:19:3:0,3,25	0/1:103,2:27:24.68:25,0,70	0/0:131,0:35:2.93:0,3,25	1/1:94,1:31:2.93:30,3,0	0/1:110,0:23:27.42:27,0,34	0/0:64,0:19:4.69:0,5,188	0/1:67,0:5:14.25:14,0,23	0/0:70,0:15:2.95:0,3,21	0/1:110,0:29:7.76:8,0,70	1/1:58,0:12:3:25,3,0	0/0:68,0:18:2.98:0,3,22	0/0:125,1:27:2.98:0,3,22	0/1:48,0:11:0.12:0,0,0	0/0:96,1:14:11.54:0,12,373	0/0:54,1:10:6.87:0,7,57	0/0:42,0:10:3.01:0,3,59
chr10	38637684	.	GTCTC	G	529.86	PASS	AB=0.937;AC=6;AF=0.115;AN=52;BaseQRankSum=6.285;DP=2351;FS=30.617;HRun=0;HaplotypeScore=238.5280;InbreedingCoeff=0.2177;MQ=26.12;MQ0=675;MQRankSum=-7.099;QD=1.08;ReadPosRankSum=-4.028;VQSLOD=0.9226;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:119,0:61:43.29:0,43,1012	0/0:33,0:9:15.05:0,15,376	./.	./.	0/0:76,0:42:21.07:0,21,545	0/0:66,0:39:30.21:0,30,911	0/0:97,0:45:60.20:0,60,1428	1/1:76,6:4:12.04:215,12,0	0/0:83,0:40:36.65:0,37,717	0/0:115,0:51:99:0,129,3102	0/0:45,0:24:33.11:0,33,857	0/0:90,0:41:35.66:0,36,747	0/0:89,0:45:48.25:0,48,1037	0/0:85,0:50:29.28:0,29,621	0/0:128,0:74:30.07:0,30,692	0/0:109,0:71:57.01:0,57,1404	0/0:97,0:52:51.50:0,52,1208	0/0:51,0:33:69.18:0,69,1498	0/1:88,5:36:99:169,0,1110	0/1:84,9:47:29.13:29,0,407	0/0:144,0:69:42.14:0,42,881	0/0:82,7:52:18.06:0,18,361	0/0:70,0:35:14.99:0,15,359	0/0:134,0:63:50.27:0,50,904	0/0:43,4:24:12.04:0,12,295	0/1:132,5:62:99:219,0,1995	0/1:78,6:47:22.93:23,0,672	0/0:46,0:23:24.06:0,24,391
chr10	38637740	.	GTC	G	243.97	PASS	AB=0.981;AC=9;AF=0.196;AN=46;BaseQRankSum=4.656;DP=1738;FS=4.524;HRun=0;HaplotypeScore=130.6734;InbreedingCoeff=-0.1020;MQ=20.87;MQ0=847;MQRankSum=-4.580;QD=0.34;ReadPosRankSum=2.812;VQSLOD=2.3400;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:80,0:34:17.59:0,18,187	./.	./.	./.	0/0:43,2:12:10.59:0,11,139	0/0:34,0:20:20.98:0,21,227	./.	1/1:86,2:2:3.01:36,3,0	0/1:52,2:20:19.03:19,0,71	0/1:82,6:16:82.34:82,0,284	0/1:43,1:15:13.20:13,0,152	0/0:65,1:21:8.98:0,9,96	0/0:46,1:18:14.66:0,15,127	0/0:35,0:18:6.01:0,6,70	0/0:70,0:31:12.02:0,12,170	0/0:52,1:33:19.76:0,20,280	0/0:60,1:27:20.79:0,21,231	0/0:39,0:21:16.50:0,16,214	0/0:67,0:20:18.03:0,18,314	0/1:103,0:31:17.15:17,0,32	0/0:136,0:21:6.02:0,6,84	./.	0/0:43,0:10:2.99:0,3,24	0/1:99,0:36:8.69:9,0,49	0/0:76,0:20:3:0,3,25	0/1:133,0:37:99:136,0,145	0/1:94,1:30:57.45:57,0,187	0/0:50,0:23:33.02:0,33,438
chr10	38637754	.	G	GTC	198.56	PASS	AB=0.963;AC=7;AF=0.146;AN=48;BaseQRankSum=2.661;DP=1671;FS=38.371;HRun=0;HaplotypeScore=122.5252;InbreedingCoeff=-0.0760;MQ=19.29;MQ0=853;MQRankSum=-3.544;QD=0.56;ReadPosRankSum=0.286;VQSLOD=0.7425;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:63,1:22:11.86:0,12,138	0/0:19,1:3:3.01:0,3,38	./.	./.	0/0:43,0:12:3:0,3,29	0/0:32,0:18:2.55:0,3,37	./.	./.	1/1:50,2:17:2.20:25,2,0	0/0:81,1:16:24.07:0,24,286	0/0:40,0:11:3.37:0,3,39	0/1:54,5:17:18.77:43,0,19	0/1:47,0:17:20.46:28,0,20	0/0:34,2:17:3:0,3,25	0/0:64,1:26:9:0,9,87	0/0:36,1:20:12.47:0,12,123	0/0:56,3:24:3.74:0,4,122	0/1:37,1:19:26.72:27,0,100	0/1:63,0:18:88.97:89,0,118	0/0:91,0:23:1.72:0,2,4	0/0:129,1:22:2.93:0,3,31	0/0:56,2:19:0:0,0,0	0/0:32,3:7:3:0,3,28	0/0:92,4:31:10.16:0,10,82	0/0:72,0:19:2.49:0,2,37	0/0:112,2:25:4.31:0,4,281	0/1:86,2:26:99:100,0,127	0/0:49,0:22:10.65:0,11,184
chr10	38637802	.	C	CTGTGTG	1313.33	PASS	AB=0.990;AC=17;AF=0.304;AN=56;BaseQRankSum=-0.801;DP=1117;FS=11.312;HRun=0;HaplotypeScore=199.7107;InbreedingCoeff=-0.1306;MQ=42.64;MQ0=258;MQRankSum=-3.030;QD=2.16;ReadPosRankSum=-5.834;VQSLOD=-0.1211;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:26:23.79:0,24,438	0/0:14,0:9:11.64:0,12,68	0/1:30,0:6:3.47:3,0,92	0/0:65,0:26:11.36:0,11,198	0/1:40,0:22:7.97:8,0,110	0/0:26,0:18:21.02:0,21,406	0/0:51,0:35:24.08:0,24,467	1/1:37,0:8:11.99:121,12,0	0/1:43,0:21:55.79:56,0,104	0/0:59,0:35:30:0,30,1227	0/0:27,0:20:28.68:0,29,550	0/0:49,0:30:1.42:0,1,415	0/1:34,0:20:78.15:78,0,204	0/1:31,0:19:12.09:12,0,31	0/0:50,0:25:14.78:0,15,137	0/1:28,0:20:59.02:259,0,59	0/1:44,0:29:99:145,0,242	0/1:32,0:21:12.59:13,0,418	0/1:38,2:19:99:395,0,122	0/1:38,0:24:0:0,0,0	0/1:53,0:24:0:0,0,0	0/1:43,1:32:0.25:1,0,0	0/0:25,0:14:9.03:0,9,113	0/0:60,0:33:25.74:0,26,354	0/0:33,0:15:2.74:0,3,66	0/1:54,1:26:99:255,0,331	0/1:44,1:21:71.21:89,0,71	0/1:11,0:6:23.94:24,0,69
chr10	38637804	.	CTCTCTT	C	4043.54	PASS	AB=0.924;AC=33;AF=0.589;AN=56;BaseQRankSum=-2.165;DP=1063;FS=10.789;HRun=0;HaplotypeScore=187.8303;InbreedingCoeff=0.0497;MQ=44.15;MQ0=203;MQRankSum=0.453;QD=4.50;ReadPosRankSum=0.295;VQSLOD=1.7912;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:46,0:27:21.11:21,0,190	1/1:14,0:9:12.01:115,12,0	0/1:34,0:6:11.87:12,0,21	0/1:64,0:27:8.08:8,0,132	0/1:36,0:22:37.95:113,0,38	0/0:24,0:18:16.84:0,17,215	0/0:49,0:35:21.05:0,21,218	1/1:29,1:8:12:189,12,0	0/1:38,0:21:42.04:138,0,42	0/1:58,0:36:37.77:38,0,694	0/0:28,0:22:29.70:0,30,300	1/1:48,0:30:33.96:243,34,0	0/1:34,0:21:91.13:211,0,91	1/1:30,0:20:12.01:126,12,0	1/1:49,0:26:20.98:212,21,0	1/1:30,0:22:33.01:454,33,0	1/1:44,0:31:59.24:690,59,0	0/0:30,0:21:8.01:0,8,250	0/1:30,3:19:89.37:431,0,89	1/1:18,19:24:5.90:37,6,0	0/1:42,4:22:0:0,0,0	0/1:21,20:32:0.24:0,0,1	1/1:21,0:14:0.50:12,0,0	1/1:55,0:33:6.80:104,7,0	0/0:14,16:15:2.94:0,3,33	0/1:42,6:25:99:629,0,224	0/1:25,14:21:56.29:163,0,56	0/1:8,1:6:21.19:97,0,21
chr10	38637806	.	CTCTT	C	6155	PASS	AB=0.916;AC=34;AF=0.607;AN=56;BaseQRankSum=-6.183;DP=1015;FS=4.821;HRun=0;HaplotypeScore=173.7672;InbreedingCoeff=-0.0827;MQ=45.55;MQ0=155;MQRankSum=-1.365;QD=7.04;ReadPosRankSum=-1.598;VQSLOD=3.7698;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:45,0:27:7.13:59,0,7	1/1:3,10:9:12.04:239,12,0	0/1:34,0:6:6.62:7,0,43	0/1:65,0:28:24.43:24,0,116	0/1:20,16:23:11.64:224,0,12	0/1:26,0:18:12.96:13,0,34	0/0:46,0:35:8.72:0,9,24	1/1:28,0:11:20.94:178,21,0	0/1:18,19:21:13.28:255,0,13	0/1:53,1:38:99:172,0,164	0/0:28,0:22:1.92:0,2,49	1/1:40,5:30:53.69:877,54,0	0/1:14,17:21:42.37:388,0,42	1/1:12,17:20:12.03:239,12,0	1/1:37,10:26:20.99:328,21,0	1/1:16,13:22:33.10:620,33,0	1/1:22,21:32:67.66:1112,68,0	0/1:31,1:22:25.36:25,0,50	0/1:34,0:20:46.44:256,0,46	1/1:35,0:24:6.78:39,7,0	0/0:40,1:21:0:0,0,0	0/1:40,1:32:0.12:0,0,0	1/1:17,4:14:9.03:124,9,0	1/1:48,4:33:31.06:475,31,0	0/0:26,0:15:2.04:0,2,6	0/1:46,2:28:99:394,0,103	0/1:34,1:21:6.55:59,0,7	0/1:8,0:6:0.98:47,0,1
chr10	38637808	.	CTT	C	6504.94	PASS	AB=0.967;AC=52;AF=0.929;AN=56;BaseQRankSum=-5.538;DP=953;FS=4.570;HRun=3;HaplotypeScore=163.8979;InbreedingCoeff=0.0810;MQ=47.99;MQ0=111;MQRankSum=0.284;QD=6.83;ReadPosRankSum=1.429;VQSLOD=1.4852;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:31,11:26:33.02:414,33,0	1/1:13,0:9:11.93:87,12,0	0/1:35,0:7:6.19:6,0,22	0/1:65,1:29:70.97:71,0,88	1/1:33,1:22:14.69:102,15,0	1/1:16,11:19:26.55:310,27,0	1/1:8,34:34:21.07:320,21,0	1/1:24,0:13:26.87:209,27,0	1/1:31,1:19:16.57:111,17,0	1/1:38,13:39:34.25:880,34,0	1/1:6,18:20:8.76:319,9,0	1/1:22,21:30:53.84:702,54,0	1/1:30,1:21:2.72:175,3,0	1/1:24,1:20:11.89:92,12,0	1/1:39,4:26:23.88:199,24,0	1/1:25,4:23:35.87:280,36,0	1/1:37,4:33:68.37:523,68,0	1/1:10,17:21:18.84:290,19,0	0/1:32,2:20:6.31:191,0,6	1/1:28,1:22:5.90:37,6,0	1/1:31,4:20:2.82:25,3,0	0/1:39,1:32:0.21:0,0,1	1/1:13,6:15:9.03:137,9,0	1/1:27,23:33:32.84:414,33,0	1/1:23,0:15:2.71:44,3,0	1/1:46,1:31:26.54:407,27,0	1/1:29,1:19:8.82:73,9,0	1/1:8,0:6:8.06:85,8,0
chr10	38640826	.	GA	G	1422.18	PASS	AB=0.623;AC=14;AF=0.250;AN=56;BaseQRankSum=-0.970;DP=443;FS=2.205;HRun=13;HaplotypeScore=63.2590;InbreedingCoeff=0.5848;MQ=85.23;MQ0=1;MQRankSum=-0.631;QD=10.94;ReadPosRankSum=1.733;VQSLOD=3.4556;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:42.92:0,43,396	0/0:2,0:7:14.80:0,15,78	0/0:38,0:21:28.10:0,28,197	0/0:26,1:17:20.29:0,20,185	0/0:9,0:19:33.24:0,33,209	0/0:9,1:12:4.91:0,5,181	0/0:11,0:13:29.70:0,30,255	0/1:11,19:30:2.53:297,0,3	0/0:2,0:11:7.22:0,7,32	0/0:8,0:8:12.01:0,12,113	0/0:17,0:17:29.15:0,29,254	0/0:14,1:15:21.03:0,21,200	0/0:7,0:10:17.78:0,18,99	0/0:2,0:11:17.71:0,18,101	0/0:1,0:13:34.24:0,34,181	0/0:10,0:19:23.15:0,23,149	0/0:4,0:29:51.37:0,51,268	0/0:8,0:8:23.94:0,24,220	0/1:10,11:21:76.54:165,0,77	0/1:5,9:15:29.53:130,0,30	1/1:5,11:17:39.83:274,40,0	1/1:1,3:4:8.94:66,9,0	0/0:5,0:7:3.05:0,3,91	0/0:22,0:27:53.72:0,54,482	1/1:2,6:8:17.87:131,18,0	1/1:4,14:19:37.76:268,38,0	1/1:0,11:11:29.83:219,30,0	0/1:2,3:5:11.52:53,0,12
chr10	38641755	.	C	CTG	526.42	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-0.774;DP=1095;FS=7.086;HRun=0;HaplotypeScore=155.3611;InbreedingCoeff=0.8453;MQ=57.36;MQ0=5;MQRankSum=0.530;QD=26.32;ReadPosRankSum=0.925;VQSLOD=4.7652;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:93.25:0,93,1148	0/0:16,0:16:39.12:0,39,487	0/0:51,0:31:68.91:0,69,767	0/0:42,0:25:32.51:0,33,482	0/0:33,0:33:78.69:0,79,949	0/0:27,0:27:66.18:0,66,798	0/0:35,0:35:81.17:0,81,967	0/0:57,0:58:99:0,115,1518	0/0:48,0:48:99:0,117,1434	0/0:56,0:56:99:0,147,1839	0/0:12,0:12:27.07:0,27,324	0/0:44,0:42:99:0,102,1215	0/0:50,0:50:99:0,132,1647	0/0:38,0:38:93.23:0,93,1107	0/0:70,0:71:99:0,177,2160	0/0:53,0:53:99:0,129,1552	0/0:33,0:33:81.25:0,81,1012	0/0:29,0:31:80.81:0,81,930	0/0:30,0:28:60:0,60,704	0/0:24,0:24:57.11:0,57,680	0/0:73,0:73:99:0,177,2165	0/0:48,0:48:99:0,120,1460	0/0:30,0:30:63.17:0,63,758	0/0:27,0:27:62.99:0,63,731	1/1:2,18:20:4.70:605,5,0	0/0:49,0:49:99:0,114,1356	0/0:38,0:38:96.30:0,96,1198	0/0:14,0:14:21.07:0,21,262
chr10	38641956	.	C	CTG	2680.82	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-4.810;DP=940;FS=0.503;HRun=0;HaplotypeScore=135.8389;InbreedingCoeff=0.7914;MQ=51.32;MQ0=78;MQRankSum=0.072;QD=25.05;ReadPosRankSum=0.906;VQSLOD=4.5338;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:59,0:59:99:0,135,1641	0/0:13,0:16:38.62:0,39,416	0/0:79,0:13:33.09:0,33,385	0/0:84,0:17:37.50:0,37,380	0/0:36,0:35:84.24:0,84,1023	0/0:24,0:24:59.17:0,59,768	0/0:40,0:33:74.84:0,75,858	0/0:16,0:12:15.04:0,15,174	0/0:39,0:37:66.18:0,66,809	0/0:58,0:53:99:0,135,1674	0/0:27,0:25:60.19:0,60,750	1/1:6,25:25:54.66:891,55,0	0/0:41,0:40:99:0,99,1166	0/0:40,0:40:96.28:0,96,1185	0/0:63,0:61:99:0,114,1382	0/0:64,0:60:99:0,138,1710	0/0:34,0:34:72.06:0,72,867	0/0:33,0:30:65.27:0,65,783	0/0:4,0:2:3:0,3,27	0/0:10,0:9:12.02:0,12,136	0/0:17,0:16:8.77:0,9,99	0/0:12,0:11:18.03:0,18,197	1/1:15,15:29:13.64:740,14,0	1/1:17,29:45:38.32:1188,38,0	0/0:7,0:7:6.02:0,6,74	0/0:13,0:12:5.95:0,6,75	0/0:7,0:7:8.94:0,9,89	0/0:6,0:5:6.02:0,6,71
chr10	38642061	.	C	CTGTG	12069.53	PASS	AB=0.970;AC=23;AF=0.411;AN=56;BaseQRankSum=-9.489;DP=1131;FS=6.171;HRun=0;HaplotypeScore=218.1432;InbreedingCoeff=0.9079;MQ=53.96;MQ0=29;MQRankSum=1.546;QD=26.35;ReadPosRankSum=6.726;VQSLOD=3.7927;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:59:86.65:0,87,2101	1/1:2,14:15:24.08:604,24,0	0/0:51,0:12:15.05:0,15,230	0/0:61,0:26:35.72:0,36,502	1/1:10,32:42:49.04:1352,49,0	0/0:24,0:23:29.81:0,30,683	0/0:31,0:31:63.11:0,63,997	0/0:44,0:43:93.29:0,93,1536	1/1:6,39:45:44.90:1635,45,0	0/0:60,0:61:99:0,120,2274	0/0:23,0:23:54.16:0,54,874	1/1:18,0:25:36.04:488,36,0	1/1:11,35:45:72.24:1745,72,0	1/1:10,34:44:66.23:1647,66,0	1/1:18,39:62:77.84:1838,78,0	1/1:10,39:47:60.21:1509,60,0	1/1:9,11:20:36.09:863,36,0	0/1:31,0:30:73.99:74,0,866	0/0:27,0:21:51.17:0,51,869	0/0:37,0:37:87.13:0,87,1369	0/0:90,0:89:99:0,180,2952	0/0:37,0:38:90.25:0,90,1442	1/1:6,0:32:6.02:106,6,0	1/1:23,0:27:20.41:211,20,0	0/0:27,0:27:57.18:0,57,970	0/0:41,0:40:99:0,102,1695	0/0:40,0:38:96.33:0,96,1628	0/0:17,0:17:36.08:0,36,586
chr10	38642165	.	C	CTG	1401.87	PASS	AB=0.949;AC=14;AF=0.250;AN=56;BaseQRankSum=-7.080;DP=839;FS=7.902;HRun=0;HaplotypeScore=208.6671;InbreedingCoeff=0.3423;MQ=53.28;MQ0=17;MQRankSum=3.352;QD=3.98;ReadPosRankSum=0.745;VQSLOD=2.0291;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:23,27:50:10.93:422,11,0	0/0:11,0:11:11.27:0,11,53	1/1:49,0:17:1.25:3,1,0	0/0:55,0:15:5.89:0,6,38	0/0:24,0:23:2.69:0,3,14	0/0:21,0:23:35.92:0,36,373	0/0:31,0:32:42.77:0,43,516	0/1:22,0:19:0:1,0,0	0/0:25,0:25:21.38:0,21,118	1/1:34,5:37:55.72:635,56,0	0/1:14,10:25:27.91:40,0,28	0/0:39,0:37:20.38:0,20,120	0/0:25,0:25:22.19:0,22,118	0/0:24,0:24:11.73:0,12,56	0/0:45,0:44:26.07:0,26,120	0/0:24,0:24:14.78:0,15,94	0/0:25,0:23:14.80:0,15,99	1/1:15,6:19:1.48:355,1,0	0/1:23,0:21:4.92:5,0,49	0/0:28,0:28:2.42:0,2,13	0/1:45,0:41:0.42:22,0,0	0/0:29,0:29:2.60:0,3,10	0/1:23,0:22:49.74:50,0,63	0/1:54,0:51:16.25:16,0,142	0/0:22,0:22:17.62:0,18,79	0/0:28,0:27:9.26:0,9,41	0/0:17,0:17:13.72:0,14,64	0/0:11,0:10:6.26:0,6,22
chr10	38642175	.	GTGTGTGTGTGTGTGTGTGTGTA	G	5344.91	PASS	AB=0.884;AC=9;AF=0.161;AN=56;BaseQRankSum=7.062;DP=819;FS=8.275;HRun=0;HaplotypeScore=414.6255;InbreedingCoeff=0.2241;MQ=51.23;MQ0=22;MQRankSum=-8.576;QD=31.63;ReadPosRankSum=3.032;VQSLOD=1.5789;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:53:69.12:0,69,4964	0/1:3,5:8:15.22:515,0,15	0/0:43,0:16:6.02:0,6,88	0/0:55,0:12:12.03:0,12,271	1/1:20,2:21:2.09:174,2,0	0/0:23,0:23:39.13:0,39,2932	0/0:34,0:34:78.24:0,78,5265	0/0:19,0:18:27.05:0,27,697	0/1:23,2:25:78.79:878,0,79	0/0:42,0:39:81.28:0,81,5424	0/0:23,0:23:17.41:0,17,1188	0/0:36,0:34:44.96:0,45,2948	0/1:23,1:24:75.86:1035,0,76	0/1:25,0:25:99:546,0,173	1/1:40,3:42:20.20:1648,20,0	0/1:20,2:22:99:549,0,100	0/0:22,0:20:19.40:0,19,292	0/0:19,0:18:39.13:0,39,2675	0/0:21,0:18:33.11:0,33,1244	0/0:27,0:27:8.26:0,8,170	0/0:50,0:47:74.02:0,74,2739	0/0:29,0:29:12.04:0,12,407	0/0:22,0:22:21.14:0,21,1876	0/0:52,0:49:59.22:0,59,3616	0/0:23,0:23:22.30:0,22,750	0/0:26,0:25:45.15:0,45,1687	0/0:20,0:20:22.43:0,22,793	0/0:7,0:9:7.57:0,8,163
chr10	38642177	.	GTGTGTGTGTGTGTGTGTGTA	G	6786.56	PASS	AB=0.875;AC=15;AF=0.268;AN=56;BaseQRankSum=2.966;DP=810;FS=16.833;HRun=0;HaplotypeScore=382.2856;InbreedingCoeff=0.6265;MQ=51.21;MQ0=22;MQRankSum=-8.076;QD=33.76;ReadPosRankSum=2.939;VQSLOD=2.0192;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:55:75.15:0,75,4736	1/1:8,0:8:11.99:443,12,0	0/0:42,0:15:3.01:0,3,42	0/0:55,0:12:5.99:0,6,139	1/1:8,13:20:2.26:140,2,0	0/0:22,0:22:39.12:0,39,2586	0/0:33,0:33:72.14:0,72,4621	0/0:20,0:19:27.09:0,27,697	1/1:20,5:25:29.92:1117,30,0	0/0:44,0:41:84.14:0,84,5057	0/0:23,0:23:14.40:0,14,1020	0/0:33,0:31:41.95:0,42,2597	1/1:17,5:22:38.98:1276,39,0	0/1:10,15:25:99:780,0,138	1/1:10,30:39:42.14:2099,42,0	1/1:18,3:21:35.78:781,36,0	0/1:18,0:17:99:149,0,111	0/0:19,0:18:39.06:0,39,2365	0/0:21,0:18:33.08:0,33,976	0/0:30,0:30:4.84:0,5,99	0/0:50,0:47:71.53:0,72,2166	0/0:31,0:31:9.39:0,9,305	0/0:23,0:23:26.98:0,27,1726	0/0:52,0:49:56.07:0,56,3092	0/1:21,0:21:2.24:2,0,546	0/0:25,0:24:22.14:0,22,1308	0/0:20,0:20:19.42:0,19,608	0/0:10,0:9:7.57:0,8,125
chr10	38642187	.	GTGTGTGTGTA	G	5328.76	PASS	AB=0.994;AC=31;AF=0.554;AN=56;BaseQRankSum=2.487;DP=773;FS=0.000;HRun=0;HaplotypeScore=263.2142;InbreedingCoeff=-0.0568;MQ=47.63;MQ0=22;MQRankSum=-3.400;QD=9.62;ReadPosRankSum=-2.512;VQSLOD=2.5326;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:61,0:60:40.21:0,40,2305	1/1:6,0:6:0.06:203,0,0	0/0:37,0:8:6.13:0,6,45	0/0:45,0:7:2.09:0,2,33	1/1:19,0:18:2.84:71,3,0	0/0:22,0:22:44.81:0,45,1420	0/0:31,0:31:66.90:0,67,2244	1/1:20,0:19:22.52:332,23,0	0/1:31,0:31:14.78:533,0,15	0/1:39,0:36:25.28:25,0,2266	0/0:22,0:22:20.32:0,20,605	0/1:30,0:28:6.18:6,0,1020	0/1:24,0:24:52.56:389,0,53	0/1:23,0:23:30.73:348,0,31	1/1:37,0:36:41.98:900,42,0	0/1:22,0:22:54.60:236,0,55	0/1:15,0:13:17.65:18,0,80	0/1:17,0:17:8.64:9,0,1039	1/1:15,1:13:11.77:352,12,0	1/1:29,0:29:1.35:34,1,0	0/1:47,0:44:28.94:526,0,29	1/1:29,2:31:6.60:105,7,0	0/1:23,0:23:99:129,0,660	0/1:51,0:48:99:104,0,1215	0/1:20,2:22:23.98:351,0,24	1/1:22,0:21:50.10:420,50,0	1/1:20,1:21:17.07:210,17,0	0/1:9,0:8:23.41:28,0,23
chr10	38642189	.	GTGTGTGTA	G	5680.91	PASS	AB=0.965;AC=33;AF=0.589;AN=56;BaseQRankSum=0.832;DP=763;FS=0.411;HRun=0;HaplotypeScore=243.0050;InbreedingCoeff=0.0869;MQ=49.43;MQ0=20;MQRankSum=-3.182;QD=10.35;ReadPosRankSum=-1.945;VQSLOD=3.0539;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:61,0:60:45.03:0,45,1857	1/1:6,0:6:0.06:161,0,0	0/0:34,0:8:9.13:0,9,77	0/0:46,0:9:5.02:0,5,50	1/1:18,0:17:2.54:57,3,0	0/0:21,0:21:44.81:0,45,1203	0/0:31,0:31:69.88:0,70,1807	1/1:20,0:19:43.17:356,43,0	0/1:30,0:30:14.78:435,0,15	0/1:38,0:35:50.58:51,0,1867	0/0:20,0:20:20.93:0,21,513	0/1:28,0:26:5.81:6,0,727	0/1:22,0:22:99:300,0,106	0/1:22,0:22:13.70:279,0,14	1/1:36,0:35:41.96:704,42,0	0/1:22,0:22:61.22:173,0,61	0/1:17,0:15:53.61:54,0,74	0/1:18,0:18:5.78:6,0,817	1/1:5,10:12:35.88:533,36,0	1/1:7,25:32:2.02:79,2,0	1/1:47,0:44:29.49:609,29,0	1/1:5,26:31:8.82:162,9,0	0/1:23,0:23:99:154,0,498	0/1:51,0:48:99:144,0,895	1/1:7,15:22:1.70:408,2,0	1/1:2,20:21:50.10:554,50,0	1/1:3,18:21:20.83:383,21,0	0/1:3,5:7:15.71:73,0,16
chr10	38642195	.	GTA	G	3887.26	PASS	AB=0.989;AC=34;AF=0.607;AN=56;BaseQRankSum=2.135;DP=701;FS=0.000;HRun=0;HaplotypeScore=180.7387;InbreedingCoeff=0.0961;MQ=49.63;MQ0=17;MQRankSum=-2.364;QD=6.93;ReadPosRankSum=0.522;VQSLOD=3.0008;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:60,0:59:9.28:9,0,657	0/1:6,0:6:0.26:36,0,0	0/0:26,0:5:9.44:0,9,76	0/0:46,0:12:22.11:0,22,146	1/1:15,0:14:2.90:16,3,0	0/0:19,0:19:20.16:0,20,528	0/0:31,0:31:44.01:0,44,784	1/1:24,0:23:65.75:533,66,0	0/1:25,0:25:19.18:156,0,19	0/1:33,0:30:86.20:86,0,643	0/0:18,0:18:23.88:0,24,226	0/1:22,3:23:26.14:281,0,26	0/1:19,0:19:16.49:152,0,16	1/1:17,0:17:19.85:108,20,0	1/1:34,0:33:28.88:156,29,0	0/1:19,0:19:54.82:113,0,55	0/1:19,0:17:67.64:88,0,68	0/1:17,0:17:68.51:69,0,223	1/1:13,0:12:35.59:249,36,0	1/1:27,0:27:2.25:20,2,0	1/1:42,0:39:59.99:565,60,0	1/1:28,0:28:8.75:52,9,0	0/1:21,0:21:57.21:223,0,57	0/1:46,1:44:91.69:309,0,92	1/1:20,0:20:20.76:139,21,0	1/1:22,0:21:50:372,50,0	1/1:20,0:20:21.75:139,22,0	0/1:8,0:7:5.48:15,0,5
chr10	38642538	.	ATGTGTGTGTGTG	A	7993.89	PASS	AB=0.787;AC=38;AF=0.679;AN=56;BaseQRankSum=7.399;DP=661;FS=13.482;HRun=0;HaplotypeScore=234.0160;InbreedingCoeff=0.6758;MQ=55.59;MQ0=18;MQRankSum=-7.933;QD=20.03;ReadPosRankSum=1.825;VQSLOD=2.5787;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:43:96.29:0,96,3098	1/1:3,0:3:2.98:22,3,0	0/0:38,0:15:14.83:0,15,197	0/0:43,0:20:5:0,5,219	1/1:2,13:14:3.48:107,3,0	0/0:6,0:18:30.07:0,30,1046	0/0:11,0:25:54.14:0,54,1801	1/1:26,0:25:18.19:561,18,0	1/1:2,16:18:15.05:528,15,0	0/0:31,0:31:75.24:0,75,2504	0/0:19,0:21:48.16:0,48,2027	1/1:16,0:23:23.83:601,24,0	1/1:2,14:16:14.82:528,15,0	1/1:7,14:20:2.57:105,3,0	1/1:5,25:30:24.08:847,24,0	1/1:4,11:15:6.49:213,6,0	1/1:6,22:28:6.02:212,6,0	0/0:38,0:41:99:0,108,3878	1/1:14,0:17:29.78:525,30,0	1/1:8,0:13:6.01:99,6,0	1/1:45,0:46:29.86:326,30,0	1/1:12,0:18:23.07:499,23,0	1/1:8,0:15:3.34:253,3,0	1/1:15,0:24:7.71:555,8,0	0/1:11,0:14:4.05:190,0,4	1/1:21,0:29:60.19:1138,60,0	1/1:14,0:21:29.09:618,29,0	0/1:2,0:3:63.58:67,0,64
chr10	38642579	.	TGC	T	2042.62	PASS	AB=0.871;AC=16;AF=0.286;AN=56;BaseQRankSum=10.268;DP=627;FS=2.354;HRun=0;HaplotypeScore=181.8186;InbreedingCoeff=0.4934;MQ=57.89;MQ0=8;MQRankSum=-10.752;QD=9.00;ReadPosRankSum=2.828;VQSLOD=3.4920;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:31:62.28:0,62,1487	0/0:1,0:1:3.01:0,3,56	0/0:34,0:23:65.20:0,65,999	0/0:26,0:21:56.88:0,57,882	0/0:10,0:10:8.85:0,9,137	0/0:15,0:15:33.04:0,33,582	0/0:22,0:21:63.17:0,63,1162	1/1:27,0:26:41.20:556,41,0	0/0:19,0:19:25.08:0,25,462	0/0:28,0:28:81.15:0,81,1472	0/0:18,0:18:51.16:0,51,932	0/1:26,0:26:0.68:53,0,1	0/0:18,0:18:16.28:0,16,367	0/0:26,0:25:35.28:0,35,665	0/0:24,0:24:34.86:0,35,343	0/0:19,0:19:35.73:0,36,518	0/0:32,0:32:41.11:0,41,687	0/0:44,0:44:99:0,112,2240	0/1:23,4:25:9.34:343,0,9	0/1:12,5:17:18.14:32,0,18	0/0:31,1:31:11.16:0,11,45	0/1:10,7:16:2.43:168,0,2	1/1:17,0:17:1.03:23,1,0	0/1:32,0:32:20.71:41,0,21	0/1:12,2:14:10.73:65,0,11	1/1:17,8:25:22.55:473,23,0	1/1:13,7:20:19.70:376,20,0	1/1:4,1:5:13.79:90,14,0
chr10	38642584	.	G	GTATC	7382.60	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=1.562;DP=667;FS=3.404;HRun=0;HaplotypeScore=198.8392;InbreedingCoeff=0.9178;MQ=63.07;MQ0=6;MQRankSum=-11.183;QD=35.84;ReadPosRankSum=-0.185;VQSLOD=4.8703;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:31:90.24:0,90,1626	0/0:2,0:2:6.02:0,6,101	0/0:36,0:25:65.38:0,65,1282	0/0:31,0:26:66.48:0,66,1111	0/0:13,0:13:15.02:0,15,228	0/0:16,0:16:33.11:0,33,647	0/0:24,0:23:63.20:0,63,1183	1/1:6,26:33:99:2497,99,0	0/0:16,0:16:30.75:0,31,641	0/0:27,0:27:81.27:0,81,1529	0/0:19,0:19:54.19:0,54,1068	0/0:29,0:29:48.11:0,48,492	0/0:18,0:18:35.15:0,35,598	0/0:27,0:26:42.81:0,43,858	0/0:27,0:27:48.12:0,48,786	0/0:21,0:21:41.70:0,42,764	0/0:31,0:31:44.82:0,45,895	0/0:43,0:43:99:0,110,2312	1/1:7,16:25:72.08:1517,72,0	1/1:6,13:20:6.02:135,6,0	1/1:10,24:36:2.98:84,3,0	1/1:10,9:19:18.06:315,18,0	0/0:17,0:17:21.04:0,21,214	0/0:32,0:32:32.99:0,33,462	1/1:5,10:16:9.03:219,9,0	1/1:11,14:27:75.13:1513,75,0	1/1:10,12:22:42.14:926,42,0	1/1:3,3:6:10.24:176,10,0
chr10	38642585	.	TGC	T	1717.25	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=9.700;DP=648;FS=12.656;HRun=0;HaplotypeScore=185.2318;InbreedingCoeff=0.7229;MQ=64.58;MQ0=6;MQRankSum=-5.911;QD=17.17;ReadPosRankSum=4.337;VQSLOD=2.5250;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:30:60.29:0,60,1428	0/0:2,0:2:6.02:0,6,106	0/0:37,0:26:41.49:0,41,1155	0/0:31,0:26:68.25:0,68,1156	0/0:12,0:12:17.79:0,18,230	0/0:15,0:15:33.03:0,33,563	0/0:24,0:23:69.07:0,69,1140	0/0:32,0:31:68.67:0,69,460	0/0:16,0:16:37.40:0,37,506	0/0:27,0:27:78.22:0,78,1420	0/0:19,0:19:54.19:0,54,1006	1/1:0,29:29:50.20:737,50,0	0/0:18,0:18:35.26:0,35,479	0/0:27,0:26:50.72:0,51,874	0/0:27,0:27:47.51:0,48,533	0/0:21,0:21:41.80:0,42,714	0/0:31,0:31:51.46:0,51,857	0/0:42,0:42:99:0,120,2165	0/0:20,0:20:20.14:0,20,292	0/0:21,0:21:17.11:0,17,90	0/0:29,0:29:23.64:0,24,104	0/0:20,0:20:4.56:0,5,61	1/1:0,17:17:21.07:320,21,0	1/1:2,30:32:56.47:781,56,0	0/0:14,0:14:13.51:0,14,63	0/0:27,0:27:26.27:0,26,297	0/1:22,0:22:26.90:27,0,112	0/0:5,0:5:3.46:0,3,43
chr10	38643415	.	AT	A	8078.43	PASS	AB=0.917;AC=35;AF=0.625;AN=56;BaseQRankSum=6.491;DP=599;FS=0.000;HRun=10;HaplotypeScore=84.8332;InbreedingCoeff=0.9495;MQ=68.07;MQ0=0;MQRankSum=-0.647;QD=21.26;ReadPosRankSum=2.340;VQSLOD=5.5047;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:68.42:0,68,895	1/1:2,12:14:32.99:287,33,0	0/0:11,0:11:17.73:0,18,161	0/1:10,1:10:2.10:2,0,186	1/1:4,30:34:86.96:755,87,0	0/0:28,0:30:75.02:0,75,802	0/0:16,0:16:41.93:0,42,436	1/1:7,18:25:53.95:469,54,0	1/1:1,24:25:68.98:599,69,0	0/0:20,0:20:51.14:0,51,564	0/0:23,0:23:66.17:0,66,723	0/0:12,0:12:32.42:0,32,202	1/1:1,21:22:59.98:521,60,0	1/1:4,15:19:41.99:365,42,0	1/1:2,14:16:38.99:339,39,0	1/1:2,15:17:44.98:391,45,0	1/1:1,15:16:41.98:365,42,0	0/0:19,0:19:54.13:0,54,588	1/1:4,15:20:44.01:367,44,0	1/1:4,21:25:59.98:521,60,0	1/1:3,20:23:59.98:521,60,0	1/1:1,27:28:71.97:625,72,0	0/0:24,0:24:70.66:0,71,433	0/0:32,0:32:82.59:0,83,520	1/1:0,21:21:56.99:495,57,0	1/1:3,26:29:77.98:677,78,0	1/1:2,28:30:74.98:651,75,0	1/1:0,5:5:15:130,15,0
chr10	38643930	.	G	GT	5333.46	PASS	AB=0.762;AC=40;AF=0.714;AN=56;BaseQRankSum=0.670;DP=487;FS=2.924;HRun=10;HaplotypeScore=69.4143;InbreedingCoeff=0.7580;MQ=69.85;MQ0=0;MQRankSum=1.786;QD=15.37;ReadPosRankSum=1.567;VQSLOD=5.3528;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:56.82:0,57,449	1/1:14,0:14:6.57:114,7,0	0/0:16,0:17:19.05:0,19,191	0/0:11,0:10:2.18:0,2,42	1/1:27,0:27:15.02:265,15,0	0/1:13,1:14:1.75:2,0,192	0/0:13,0:13:32.94:0,33,270	1/1:9,15:25:50.93:476,51,0	1/1:11,0:11:25.61:133,26,0	0/0:21,0:21:41.91:0,42,344	0/0:31,0:31:74.80:0,75,602	1/1:11,0:11:6.57:30,7,0	1/1:14,0:14:34.31:185,34,0	1/1:16,0:16:31.12:158,31,0	1/1:19,0:19:20.72:183,21,0	1/1:22,0:22:29.54:235,30,0	1/1:20,0:20:42.89:223,43,0	0/0:24,0:25:64.11:0,64,495	1/1:1,15:17:44.91:444,45,0	1/1:6,24:32:77.70:742,78,0	1/1:0,7:7:15.04:160,15,0	1/1:2,15:18:41.94:430,42,0	1/1:10,0:10:11.16:45,11,0	1/1:2,0:2:2.47:14,2,0	1/1:1,12:13:30.08:320,30,0	0/1:7,16:23:16.82:434,0,17	1/1:2,21:23:56.17:582,56,0	1/1:2,6:8:15.04:160,15,0
chr10	38643940	.	T	TTTTTA	505.15	PASS	AB=0.688;AC=9;AF=0.161;AN=56;BaseQRankSum=0.490;DP=490;FS=0.000;HRun=0;HaplotypeScore=121.3749;InbreedingCoeff=0.4744;MQ=73.70;MQ0=0;MQRankSum=0.481;QD=5.32;ReadPosRankSum=-4.519;VQSLOD=0.5545;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:63.11:0,63,1035	0/0:1,0:13:11.85:0,12,49	0/0:22,0:22:53.91:0,54,718	0/0:11,0:10:13.08:0,13,224	0/1:5,0:28:20.45:20,0,90	0/0:14,0:14:39.05:0,39,628	0/0:15,0:15:42.09:0,42,728	0/1:20,0:20:78.01:78,0,260	0/0:0,0:12:8.33:0,8,21	0/0:18,0:18:54.15:0,54,929	0/0:31,0:31:87.18:0,87,1485	1/1:0,0:10:5.93:159,6,0	0/0:0,0:14:10.99:0,11,29	0/0:0,0:16:10.10:0,10,26	0/1:1,0:17:3.19:3,0,35	0/0:1,0:20:18.40:0,18,62	0/0:0,0:19:13.29:0,13,35	0/0:27,0:27:78.14:0,78,1291	0/0:19,0:19:30.41:0,30,322	0/0:28,0:28:68.84:0,69,476	0/0:7,0:7:14.88:0,15,103	0/0:17,0:17:48.02:0,48,328	1/1:0,0:14:12.04:300,12,0	1/1:0,1:6:2.54:79,3,0	0/0:15,0:15:38.74:0,39,280	0/0:23,0:23:14.28:0,14,477	0/0:25,0:24:71.44:0,71,507	0/0:7,0:7:17.83:0,18,127
chr10	38644597	.	A	AT	4074.21	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-12.490;DP=588;FS=1.658;HRun=9;HaplotypeScore=106.9552;InbreedingCoeff=0.9828;MQ=75.57;MQ0=0;MQRankSum=0.256;QD=24.54;ReadPosRankSum=4.181;VQSLOD=3.3473;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:62.96:0,63,542	1/1:0,16:17:41.91:432,42,0	0/0:23,0:21:12.38:0,12,280	0/0:13,0:13:23.13:0,23,180	1/1:4,23:27:43.05:676,43,0	0/0:23,0:23:65.93:0,66,562	0/0:14,0:14:32.96:0,33,284	0/0:38,0:38:83.71:0,84,683	1/1:3,11:14:33.09:365,33,0	0/0:35,0:35:92.93:0,93,795	0/0:28,0:28:77.88:0,78,657	0/0:16,0:16:47.97:0,48,413	1/1:2,20:22:48.06:516,48,0	1/1:4,16:20:39.11:431,39,0	1/1:2,19:21:45.12:493,45,0	1/1:2,17:19:42.11:465,42,0	1/1:2,24:26:63.17:696,63,0	0/0:23,0:23:68.94:0,69,588	0/0:24,0:24:50:0,50,416	0/0:22,0:22:56.86:0,57,456	0/0:19,0:19:52.79:0,53,440	0/0:18,0:18:52.06:0,52,422	0/0:20,0:20:50.95:0,51,435	0/0:12,0:12:29.96:0,30,256	0/0:21,0:21:54.08:0,54,426	0/0:23,0:23:65.97:0,66,560	0/0:22,0:22:41.86:0,42,442	0/0:3,0:3:8.04:0,8,58
chr10	38645333	.	AGG	A	2643.20	PASS	AB=0.750;AC=18;AF=0.333;AN=54;BaseQRankSum=3.219;DP=393;FS=2.252;HRun=13;HaplotypeScore=97.6526;InbreedingCoeff=0.7363;MQ=87.83;MQ0=2;MQRankSum=-2.401;QD=15.73;ReadPosRankSum=4.656;VQSLOD=3.0502;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:11,1:14:11.26:11,0,97	0/0:3,0:3:8.97:0,9,74	0/0:28,0:21:6.82:0,7,213	0/0:27,0:20:30.16:0,30,235	0/0:14,0:14:20.62:0,21,193	0/0:8,0:8:9.38:0,9,61	0/0:16,0:16:17.94:0,18,160	0/1:6,7:15:0.59:154,0,1	0/0:11,0:12:16.53:0,17,121	0/0:9,0:9:3.01:0,3,43	0/0:1,0:1:2.37:0,2,8	0/0:11,0:12:11.24:0,11,173	0/0:10,0:11:20.94:0,21,184	0/0:20,0:21:51.02:0,51,456	0/0:13,0:14:29.43:0,29,234	0/0:12,0:12:8.67:0,9,80	0/0:14,0:14:29.98:0,30,258	./.	1/1:8,5:13:16.96:135,17,0	1/1:6,11:17:31.51:285,32,0	1/1:10,16:26:47.70:437,48,0	1/1:5,14:19:38.82:377,39,0	0/0:6,0:10:0.19:0,0,73	0/0:11,0:11:21.03:0,21,207	1/1:5,8:13:32.94:307,33,0	1/1:11,13:25:46.85:439,47,0	1/1:5,17:22:60:575,60,0	1/1:0,4:4:12.02:116,12,0
chr10	38645334	.	G	GA	4391.57	PASS	AC=40;AF=0.741;AN=54;BaseQRankSum=-1.825;DP=407;FS=18.019;HRun=1;HaplotypeScore=105.8657;InbreedingCoeff=0.8112;MQ=86.02;MQ0=3;MQRankSum=-4.902;QD=14.69;ReadPosRankSum=4.572;VQSLOD=3.2938;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:5.48:0,5,147	1/1:2,2:4:5.98:77,6,0	0/0:31,0:22:33.86:0,34,251	0/0:32,0:22:28.30:0,28,264	1/1:9,4:13:20.43:233,20,0	0/0:8,0:8:13.54:0,14,104	0/0:14,0:14:22.25:0,22,198	1/1:15,0:15:29.53:192,30,0	1/1:11,4:15:24.37:236,24,0	0/0:8,0:8:12.02:0,12,125	0/0:2,0:2:2.98:0,3,21	1/1:12,0:12:6.24:106,6,0	1/1:9,3:12:8.28:127,8,0	1/1:12,12:24:51.89:599,52,0	1/1:11,4:15:25.75:287,26,0	1/1:3,10:13:2.68:74,3,0	1/1:11,6:17:26.90:307,27,0	./.	1/1:13,0:13:28.52:221,29,0	1/1:17,0:17:36.85:202,37,0	1/1:26,0:26:58.89:338,59,0	1/1:19,0:19:45.17:263,45,0	1/1:9,1:10:18.34:110,18,0	1/1:10,0:10:2.39:47,2,0	1/1:13,0:13:34.16:199,34,0	1/1:24,0:24:62.82:414,63,0	1/1:23,0:23:63.60:317,64,0	1/1:4,0:4:10.55:43,11,0
chr10	38645411	.	CA	C	13251.98	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=11.236;DP=549;FS=0.000;HRun=3;HaplotypeScore=76.6451;InbreedingCoeff=0.9986;MQ=87.37;MQ0=0;MQRankSum=-3.954;QD=34.33;ReadPosRankSum=2.909;VQSLOD=5.3883;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:96.32:0,96,1381	1/1:0,8:8:24.08:298,24,0	0/0:20,0:20:47.37:0,47,637	0/0:19,0:19:48.16:0,48,666	1/1:1,25:26:75.24:930,75,0	0/0:18,0:18:51.17:0,51,734	0/0:28,0:28:78.26:0,78,1123	1/1:0,25:25:75.24:930,75,0	1/1:0,23:23:66.21:818,66,0	0/0:22,0:21:66.22:0,66,950	0/0:13,0:13:33.11:0,33,475	1/1:0,21:21:57.18:707,57,0	1/1:0,11:11:33.10:409,33,0	1/1:1,20:21:60.19:744,60,0	1/1:0,14:14:42.13:521,42,0	1/1:0,20:20:60.19:744,60,0	1/1:1,20:21:57.18:707,57,0	0/0:11,0:11:33.11:0,33,475	1/1:0,11:11:33.10:406,33,0	1/1:0,23:23:57.18:706,57,0	1/1:0,25:25:60.19:744,60,0	1/1:2,17:19:51.16:632,51,0	1/1:1,16:17:45.14:558,45,0	1/1:0,17:17:45.14:558,45,0	1/1:0,19:19:54.17:670,54,0	1/1:1,20:21:19.96:687,20,0	1/1:0,29:29:84.26:1040,84,0	1/1:0,15:15:36.11:446,36,0
chr10	38646067	.	A	AAC	1123.78	PASS	AB=0.768;AC=32;AF=0.640;AN=50;BaseQRankSum=-3.033;DP=549;FS=3.068;HRun=0;HaplotypeScore=122.3732;InbreedingCoeff=0.3284;MQ=49.89;MQ0=13;MQRankSum=3.273;QD=3.17;ReadPosRankSum=-1.375;VQSLOD=2.4695;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:24,9:33:35.42:35,0,49	1/1:8,0:8:5.99:48,6,0	./.	./.	1/1:34,0:34:8.14:75,8,0	0/1:12,7:20:46.92:159,0,47	1/1:15,7:20:12.04:167,12,0	1/1:26,0:21:0.94:2,1,0	1/1:16,0:14:5.99:50,6,0	1/1:21,0:19:1.32:81,1,0	0/1:11,4:15:35.20:35,0,48	1/1:13,0:13:2.99:23,3,0	1/1:19,0:19:5.99:51,6,0	1/1:15,0:13:3:25,3,0	1/1:20,0:20:3:25,3,0	1/1:13,0:13:5.94:44,6,0	1/1:16,0:16:9.33:60,9,0	0/1:9,3:13:2.05:103,0,2	0/0:13,0:13:2.62:0,3,13	0/0:22,0:22:5.68:0,6,28	./.	0/0:20,0:20:12.91:0,13,60	1/1:6,0:10:3:26,3,0	1/1:38,0:38:19.20:268,19,0	0/0:16,0:16:5.68:0,6,28	0/0:18,0:17:10.91:0,11,55	0/0:32,0:31:27.60:0,28,131	0/0:10,0:9:2.63:0,3,14
chr10	38646101	.	C	CACACACACAT	3161.64	PASS	AB=0.571;AC=21;AF=0.375;AN=56;BaseQRankSum=-2.396;DP=551;FS=5.905;HRun=0;HaplotypeScore=179.1776;InbreedingCoeff=0.7602;MQ=53.66;MQ0=25;MQRankSum=-0.570;QD=13.63;ReadPosRankSum=2.893;VQSLOD=1.9533;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:28:35.44:0,35,379	1/1:8,0:8:15.02:305,15,0	0/0:15,0:7:14.52:0,15,175	0/0:21,0:9:24.02:0,24,240	1/1:27,2:29:21.01:509,21,0	0/0:19,0:19:37.81:0,38,484	0/0:20,0:18:29.80:0,30,271	0/0:24,0:20:41.73:0,42,353	1/1:3,2:13:6.02:300,6,0	0/0:20,0:18:24.76:0,25,202	0/0:16,0:16:26.90:0,27,314	1/1:2,0:16:2.97:20,3,0	1/1:10,4:17:6.19:246,6,0	1/1:8,10:19:9.50:442,10,0	1/1:10,0:26:9.03:381,9,0	1/1:7,12:22:5.05:313,5,0	1/1:25,0:25:19.10:491,19,0	0/0:15,0:15:28.90:0,29,305	0/0:15,0:14:29.93:0,30,287	0/0:17,0:16:5.56:0,6,125	0/0:21,0:19:29.61:0,30,275	0/0:20,0:20:17.41:0,17,255	1/1:12,0:12:10.54:79,11,0	0/1:9,0:38:10.18:273,0,10	0/0:16,0:16:5.98:0,6,141	0/0:15,0:13:23.89:0,24,345	0/0:30,0:30:10.91:0,11,546	0/0:5,0:4:2.84:0,3,70
chr10	38646104	.	ACACACACC	A	1497.18	PASS	AB=0.989;AC=13;AF=0.232;AN=56;BaseQRankSum=1.201;DP=535;FS=4.382;HRun=0;HaplotypeScore=135.7239;InbreedingCoeff=0.4143;MQ=57.34;MQ0=24;MQRankSum=-3.605;QD=9.92;ReadPosRankSum=3.419;VQSLOD=2.0496;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:31:53.85:0,54,925	0/0:9,0:9:18.03:0,18,337	0/0:17,0:9:26.61:0,27,229	0/0:21,0:10:30.02:0,30,295	0/0:29,0:29:20.97:0,21,383	0/0:19,0:19:39.08:0,39,997	0/0:20,0:18:34.29:0,34,692	0/1:23,0:19:4.43:294,0,4	0/0:15,0:13:6.02:0,6,157	0/0:19,0:17:43.81:0,44,1139	0/0:16,0:16:33:0,33,807	0/0:16,0:16:9.01:0,9,164	0/0:13,0:13:15.08:0,15,301	0/0:21,0:19:5.69:0,6,152	0/0:25,0:25:8.99:0,9,171	0/0:23,0:22:9.97:0,10,219	0/0:25,0:25:52.67:0,53,818	0/0:15,0:15:36.47:0,36,634	1/1:15,0:14:28.49:258,28,0	0/1:12,0:11:40.85:41,0,43	0/1:20,0:19:14.34:137,0,14	0/1:17,1:18:46.14:178,0,46	0/0:12,0:12:20.99:0,21,295	0/0:36,0:34:39.61:0,40,1415	1/1:14,0:14:6:55,6,0	0/1:15,0:13:11.08:217,0,11	1/1:26,3:29:11.60:452,12,0	1/1:5,0:4:3:28,3,0
chr10	38646106	.	ACACACC	A	2709.31	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-1.480;DP=526;FS=9.685;HRun=0;HaplotypeScore=119.0905;InbreedingCoeff=0.8708;MQ=60.70;MQ0=22;MQRankSum=-3.062;QD=19.78;ReadPosRankSum=2.742;VQSLOD=2.9122;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:32:46.97:0,47,662	0/0:10,0:10:21.01:0,21,292	0/0:17,0:10:29.61:0,30,255	0/0:23,0:12:36.02:0,36,348	0/0:28,0:28:20.97:0,21,311	0/0:20,0:20:42.08:0,42,816	0/0:22,0:20:40.26:0,40,587	1/1:22,0:18:39.14:398,39,0	0/0:15,0:13:6.02:0,6,115	0/0:20,0:18:46.42:0,46,877	0/0:16,0:16:33:0,33,625	0/0:16,0:16:9.01:0,9,151	0/0:13,0:13:14.60:0,15,238	0/0:21,0:19:2.85:0,3,84	0/0:24,0:24:8.96:0,9,126	0/0:22,0:21:9.40:0,9,165	0/0:25,0:25:52.29:0,52,624	0/0:14,0:14:35.96:0,36,499	1/1:2,12:13:32.13:325,32,0	1/1:4,7:10:9.03:182,9,0	1/1:20,0:19:29.93:290,30,0	1/1:4,11:15:18.94:380,19,0	0/0:12,0:12:21.01:0,21,249	0/0:37,0:35:42.60:0,43,1244	1/1:1,12:13:5.99:145,6,0	1/1:3,13:15:32.81:449,33,0	1/1:5,18:23:30.10:669,30,0	1/1:0,3:3:3.01:73,3,0
chr10	38647497	.	A	AG	10884.23	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=2.079;DP=711;FS=0.290;HRun=1;HaplotypeScore=119.9431;InbreedingCoeff=0.9915;MQ=74.94;MQ0=0;MQRankSum=-2.757;QD=39.01;ReadPosRankSum=4.588;VQSLOD=4.4199;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:84.26:0,84,1075	1/1:0,9:9:27.09:404,27,0	0/0:20,0:20:60.14:0,60,716	0/0:23,0:23:54.06:0,54,638	1/1:1,22:23:36.76:631,37,0	0/0:22,0:22:60.14:0,60,745	0/0:29,0:29:81.25:0,81,1037	0/0:34,0:34:96.28:0,96,1209	1/1:2,33:35:93.31:1384,93,0	0/0:28,0:28:75.24:0,75,974	0/0:22,0:22:60.17:0,60,750	1/1:0,24:24:66.22:989,66,0	1/1:0,24:24:69.23:1033,69,0	1/1:1,21:22:60.20:895,60,0	1/1:1,32:33:87.29:1303,87,0	1/1:0,30:30:90.30:1342,90,0	1/1:3,25:28:69.23:1032,69,0	0/0:27,0:27:75.24:0,75,974	0/0:23,0:23:66.21:0,66,857	0/0:20,0:20:56.86:0,57,665	0/0:41,0:41:99:0,120,1542	0/0:27,0:27:75.18:0,75,927	1/1:3,23:26:54.17:792,54,0	1/1:0,25:25:72.24:1079,72,0	0/0:19,0:19:57.12:0,57,682	0/0:19,0:19:42.12:0,42,517	0/0:46,0:46:99:0,129,1660	0/0:4,0:4:9.03:0,9,116
chr10	38648134	.	CAAA	C	1848.27	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=10.243;DP=430;FS=10.806;HRun=16;HaplotypeScore=96.2405;InbreedingCoeff=0.9319;MQ=49.60;MQ0=14;MQRankSum=-9.120;QD=19.46;ReadPosRankSum=3.680;VQSLOD=1.9010;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:24:48.51:0,49,564	1/1:0,4:4:12.03:129,12,0	0/0:22,0:6:7.90:0,8,97	0/0:26,0:5:6:0,6,62	1/1:4,16:21:16.18:310,16,0	0/0:13,0:15:32.92:0,33,409	0/0:7,0:8:15.03:0,15,237	0/0:16,0:18:45.03:0,45,615	1/1:2,5:7:15.04:161,15,0	0/0:23,0:24:58.40:0,58,894	0/0:15,0:18:35.81:0,36,398	0/0:10,0:11:16.55:0,17,205	1/1:0,10:10:30.08:323,30,0	1/1:4,4:8:8.79:96,9,0	1/1:3,15:18:44.92:482,45,0	1/1:5,7:12:20.90:225,21,0	1/1:5,10:15:29.92:322,30,0	0/0:10,0:12:18.06:0,18,284	0/0:15,0:14:35.31:0,35,536	0/0:14,0:18:44.35:0,44,507	0/0:10,0:10:19.62:0,20,291	0/0:9,0:9:18.01:0,18,260	0/0:15,0:16:21.56:0,22,344	0/0:23,1:26:9.68:0,10,489	0/0:10,0:10:24.08:0,24,397	0/0:12,0:13:33.08:0,33,525	0/0:19,0:21:44.88:0,45,689	0/0:14,0:12:23.94:0,24,277
chr10	38648156	.	A	AC	6441.39	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-1.420;DP=445;FS=5.494;HRun=6;HaplotypeScore=82.4994;InbreedingCoeff=0.9631;MQ=68.99;MQ0=10;MQRankSum=-3.900;QD=28.13;ReadPosRankSum=3.261;VQSLOD=5.5435;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:33.06:0,33,329	1/1:2,4:6:9.03:113,9,0	0/0:36,0:15:7.15:0,7,190	0/0:41,0:15:11.72:0,12,186	1/1:3,17:20:39.12:490,39,0	0/0:16,0:16:36.02:0,36,355	0/0:8,0:8:24.02:0,24,230	1/1:7,20:27:48.13:579,48,0	1/1:0,11:11:21.07:264,21,0	0/0:25,0:24:60.12:0,60,604	0/0:13,0:13:26.79:0,27,256	0/0:10,0:10:24.04:0,24,241	1/1:0,11:11:33.11:415,33,0	1/1:1,3:4:9.03:113,9,0	1/1:2,17:19:42.13:528,42,0	1/1:0,10:10:30.10:377,30,0	1/1:2,14:16:36.12:453,36,0	0/0:11,0:11:24.05:0,24,244	1/1:5,9:14:27.09:339,27,0	1/1:3,15:18:42.13:528,42,0	1/1:0,9:9:27.09:340,27,0	1/1:0,10:10:21.07:263,21,0	0/0:15,0:15:42.08:0,42,420	0/0:21,0:21:45.09:0,45,454	1/1:1,9:10:27.09:340,27,0	1/1:0,15:15:45.14:566,45,0	1/1:3,17:20:39.06:471,39,0	1/1:2,7:7:21.07:264,21,0
chr10	38648567	.	AAAAT	A	2062.79	PASS	AB=0.820;AC=32;AF=0.696;AN=46;BaseQRankSum=6.469;DP=273;FS=0.861;HRun=0;HaplotypeScore=50.5090;InbreedingCoeff=0.5602;MQ=59.35;MQ0=0;MQRankSum=-1.562;QD=11.03;ReadPosRankSum=2.165;VQSLOD=2.3616;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:7,9:16:24.77:307,0,25	1/1:5,2:7:3.01:47,3,0	./.	./.	1/1:7,7:14:21.07:331,21,0	0/0:8,0:8:18.05:0,18,381	0/0:9,0:9:9.03:0,9,212	0/1:20,0:20:0:0,0,0	1/1:3,3:6:6.02:95,6,0	./.	1/1:4,3:7:9.03:142,9,0	0/0:6,0:6:6.02:0,6,143	1/1:4,1:5:3.01:47,3,0	1/1:5,2:7:6.02:95,6,0	1/1:7,2:9:3.01:47,3,0	1/1:5,2:7:6.02:95,6,0	0/0:21,0:21:42.14:0,42,992	1/1:6,9:15:21.07:331,21,0	1/1:12,0:18:12.01:112,12,0	1/1:5,0:8:6.01:56,6,0	./.	./.	0/0:8,0:8:3.01:0,3,71	0/0:6,0:6:6.02:0,6,136	1/1:7,0:14:9.01:84,9,0	1/1:4,1:14:28.18:262,28,0	1/1:7,0:10:9.01:84,9,0	1/1:7,0:10:9.01:84,9,0
chr10	38648711	.	CT	C	297.79	PASS	AB=0.770;AC=11;AF=0.212;AN=52;BaseQRankSum=1.002;DP=282;FS=1.431;HRun=15;HaplotypeScore=51.6794;InbreedingCoeff=0.5057;MQ=79.82;MQ0=1;MQRankSum=0.176;QD=3.87;ReadPosRankSum=3.577;VQSLOD=-0.0816;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,7:13:17.06:93,17,0	0/0:0,0:1:2.84:0,3,14	0/0:11,0:7:5.98:0,6,49	0/1:14,0:14:7.94:8,0,8	0/0:7,0:13:30.40:0,30,173	1/1:5,3:10:12.86:69,13,0	1/1:3,1:6:7.87:44,8,0	0/0:25,1:26:16.41:0,16,347	0/0:6,0:10:17.43:0,17,82	1/1:6,3:9:9.66:60,10,0	0/1:4,4:9:6.75:66,0,7	0/0:2,0:4:2.84:0,3,14	0/0:7,0:9:17.35:0,17,96	0/0:3,0:4:10.38:0,10,65	0/0:2,0:6:8.52:0,9,42	0/0:3,0:6:13.67:0,14,55	0/0:17,0:21:42.81:0,43,277	0/1:8,7:16:12.19:111,0,12	0/0:16,1:17:15.36:0,15,232	0/0:12,1:16:9.24:0,9,175	0/0:2,0:2:3:0,3,26	./.	./.	0/0:2,0:2:5.95:0,6,43	0/0:10,0:10:18.62:0,19,156	0/0:17,0:17:20.96:0,21,176	0/0:12,0:13:14.42:0,14,107	0/0:12,1:13:10.57:0,11,206
chr10	38648779	.	TA	T	2218.85	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=10.375;DP=301;FS=5.063;HRun=3;HaplotypeScore=41.8036;InbreedingCoeff=0.9271;MQ=63.70;MQ0=2;MQRankSum=-0.082;QD=28.09;ReadPosRankSum=3.957;VQSLOD=2.5251;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:14:32.10:0,32,473	1/1:0,3:3:9.03:111,9,0	0/0:4,0:4:9.03:0,9,125	0/0:12,0:12:30.05:0,30,362	1/1:1,8:9:21.01:241,21,0	0/0:7,0:7:21.06:0,21,279	0/0:9,0:9:24.08:0,24,331	0/0:30,0:30:85.31:0,85,1086	1/1:2,15:17:42.12:507,42,0	0/0:9,0:9:27.09:0,27,378	0/0:8,0:8:24.08:0,24,334	0/0:8,0:8:24.07:0,24,318	1/1:0,11:11:27.08:334,27,0	1/1:0,5:5:12.04:148,12,0	1/1:0,3:3:6.02:74,6,0	1/1:0,9:9:27.08:333,27,0	1/1:1,21:22:57.09:669,57,0	0/0:14,0:14:36.04:0,36,457	0/0:19,0:18:51.16:0,51,697	0/0:14,0:14:42.07:0,42,531	0/0:3,0:3:9.03:0,9,126	0/0:5,0:5:11.82:0,12,151	0/0:5,0:5:15.05:0,15,209	0/0:3,0:3:9.01:0,9,108	0/0:12,0:12:36.02:0,36,443	0/0:13,0:13:39.11:0,39,514	0/0:8,0:8:24.06:0,24,317	0/0:23,0:22:66.22:0,66,923
chr10	38648970	.	C	CACAG	10182.10	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=13.792;DP=608;FS=2.263;HRun=0;HaplotypeScore=104.5948;InbreedingCoeff=0.9979;MQ=62.79;MQ0=1;MQRankSum=-3.841;QD=58.86;ReadPosRankSum=2.322;VQSLOD=6.4676;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,105,1859	1/1:1,8:9:24.08:622,24,0	0/0:21,0:19:48.05:0,48,753	0/0:19,0:19:45.15:0,45,752	1/1:3,10:13:24.08:622,24,0	0/0:19,0:19:51.16:0,51,880	0/0:22,0:22:63.20:0,63,1094	0/0:29,0:29:66.23:0,66,1186	1/1:4,29:33:84.28:2179,84,0	0/0:19,0:18:48.16:0,48,863	0/0:12,0:12:33.11:0,33,593	0/0:25,0:25:66.23:0,66,1181	1/1:1,17:18:51.18:1323,51,0	1/1:5,15:21:42.14:1089,42,0	1/1:3,18:21:51.18:1324,51,0	1/1:7,17:24:51.18:1309,51,0	1/1:10,22:33:67.11:1713,67,0	0/0:18,0:18:48.14:0,48,822	0/0:25,0:25:66.23:0,66,1178	0/0:21,0:21:57.20:0,57,1018	0/0:39,0:39:99:0,114,1991	0/0:11,0:11:33.11:0,33,593	0/0:15,0:15:42.14:0,42,754	0/0:23,0:23:63.22:0,63,1126	0/0:34,0:34:96.32:0,96,1695	0/0:18,0:18:54.18:0,54,944	0/0:20,0:19:54.18:0,54,957	0/0:7,0:7:18.06:0,18,323
chr10	38649168	.	C	CA	6932.50	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-12.077;DP=628;FS=1.938;HRun=1;HaplotypeScore=60.9244;InbreedingCoeff=0.9984;MQ=63.11;MQ0=2;MQRankSum=-0.244;QD=40.78;ReadPosRankSum=2.976;VQSLOD=5.5050;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:78.22:0,78,981	1/1:0,7:7:21.07:315,21,0	0/0:28,0:24:67.96:0,68,805	0/0:16,0:14:36.05:0,36,425	1/1:1,24:25:72.20:1054,72,0	0/0:22,0:22:63.19:0,63,804	0/0:19,0:19:54.16:0,54,686	0/0:37,0:37:99:0,108,1401	1/1:1,21:22:66.22:979,66,0	0/0:28,0:28:84.27:0,84,1091	0/0:21,0:21:63.20:0,63,818	0/0:15,0:15:45.15:0,45,584	1/1:1,20:21:57.19:854,57,0	1/1:0,18:18:45.15:674,45,0	1/1:1,26:27:66.22:989,66,0	1/1:0,26:26:78.26:1168,78,0	1/1:1,23:24:59.76:898,60,0	0/0:22,0:22:60.19:0,60,779	0/0:20,0:20:60.17:0,60,763	0/0:20,0:20:60.18:0,60,764	0/0:20,0:20:60.15:0,60,735	0/0:19,0:19:57.16:0,57,724	0/0:24,0:24:72.23:0,72,934	0/0:15,0:15:42.12:0,42,530	0/0:27,0:27:78.25:0,78,1013	0/0:26,0:26:75.24:0,75,974	0/0:39,0:38:99:0,105,1362	0/0:11,0:11:19.88:0,20,239
chr10	38650286	.	A	AACTCACAC	2485.52	PASS	AB=0.958;AC=11;AF=0.196;AN=56;BaseQRankSum=9.506;DP=613;FS=10.021;HRun=0;HaplotypeScore=186.1704;InbreedingCoeff=0.1002;MQ=65.81;MQ0=1;MQRankSum=-9.258;QD=17.75;ReadPosRankSum=-2.697;VQSLOD=1.7105;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:68.96:0,69,1535	0/1:2,0:2:80.05:100,0,80	0/0:42,0:27:75.07:0,75,1451	0/0:54,0:45:76.86:0,77,2224	0/1:17,0:17:17.63:18,0,19	0/0:34,0:34:97.51:0,98,2439	0/0:19,0:19:4.55:0,5,1326	0/0:29,0:29:87.09:0,87,1876	0/1:24,0:25:7.66:737,0,8	0/0:28,0:28:81.19:0,81,1861	0/0:19,0:19:54.17:0,54,1276	0/0:22,0:22:30.07:0,30,780	0/1:21,0:21:37.77:482,0,38	0/1:15,1:23:42.86:442,0,43	1/1:20,0:20:1.45:512,1,0	0/1:9,0:9:57.11:126,0,57	1/1:9,0:9:6.02:133,6,0	0/1:14,0:14:81.17:81,0,844	0/0:15,0:15:3.87:0,4,782	0/0:20,0:20:60.18:0,60,1496	0/0:46,0:45:99:0,136,3279	0/0:19,0:19:51.17:0,51,1329	0/0:11,0:10:22.93:0,23,276	0/0:22,0:22:38.87:0,39,810	0/0:9,0:9:27.08:0,27,712	0/0:24,0:24:69.23:0,69,1808	0/0:22,0:21:65.92:0,66,1356	0/0:11,0:11:33.11:0,33,790
chr10	38650292	.	A	ACACACACAC	3071.43	PASS	AB=0.809;AC=13;AF=0.232;AN=56;BaseQRankSum=6.841;DP=613;FS=20.801;HRun=0;HaplotypeScore=182.7432;InbreedingCoeff=0.2415;MQ=60.45;MQ0=4;MQRankSum=-6.415;QD=17.16;ReadPosRankSum=-1.194;VQSLOD=1.5125;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:79:0,79,1634	0/1:1,0:2:91.72:98,0,92	0/0:44,0:27:77.59:0,78,1181	0/0:55,0:45:97.37:0,97,1849	0/1:15,2:17:5.35:63,0,5	0/0:34,0:34:98.54:0,99,2704	0/0:18,0:18:51.17:0,51,1478	0/0:29,0:29:87.24:0,87,1822	0/1:12,11:25:2.66:932,0,3	0/0:25,0:25:75.21:0,75,1835	0/0:18,0:18:54.15:0,54,1452	0/1:22,0:22:6.17:6,0,362	1/1:12,3:17:11.01:562,11,0	0/1:14,4:20:32.44:546,0,32	0/1:15,5:21:0.22:553,0,0	0/1:4,2:15:61.56:184,0,62	1/1:12,0:12:11.97:204,12,0	0/1:11,0:14:65.77:66,0,848	0/1:14,0:13:16.33:16,0,630	0/0:22,0:22:66.19:0,66,1758	0/0:45,0:44:99:0,129,3389	0/0:17,0:17:51.17:0,51,1457	0/0:12,0:11:23.45:0,23,202	0/0:22,0:22:42.28:0,42,589	0/0:9,0:9:27.09:0,27,855	0/0:25,0:25:72.23:0,72,1887	0/0:19,0:19:55.07:0,55,1342	0/0:12,0:12:36.01:0,36,838
chr10	38650309	.	ATATGCG	A	672.13	PASS	AB=0.944;AC=7;AF=0.125;AN=56;BaseQRankSum=7.413;DP=630;FS=4.799;HRun=0;HaplotypeScore=155.4063;InbreedingCoeff=0.7908;MQ=58.40;MQ0=5;MQRankSum=-1.390;QD=9.34;ReadPosRankSum=2.982;VQSLOD=1.7997;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,4:31:63.56:0,64,2085	0/0:2,0:2:6.02:0,6,195	0/0:41,0:27:74.34:0,74,2230	0/0:45,0:33:75.44:0,75,2574	0/0:9,7:16:17.93:0,18,534	0/0:34,0:34:99:0,102,3611	0/0:23,0:23:62.94:0,63,2112	0/0:42,0:42:99:0,126,4203	0/0:26,0:26:47.98:0,48,1445	0/0:20,0:20:60.20:0,60,2108	0/0:18,0:18:51.18:0,51,1889	1/1:16,0:20:30.05:340,30,0	0/1:16,1:17:89.06:89,0,689	0/0:16,2:18:30.10:0,30,932	0/0:17,4:21:27.07:0,27,890	0/0:12,0:12:12.04:0,12,373	0/0:9,4:13:14.66:0,15,463	0/0:15,0:15:39.08:0,39,1158	0/0:11,0:9:27.09:0,27,890	0/0:27,0:27:81.28:0,81,2923	0/0:41,0:40:99:0,117,4053	0/0:18,0:18:51.16:0,51,1722	1/1:13,0:15:20.17:176,20,0	1/1:15,2:19:23.39:215,23,0	0/0:16,0:16:48.16:0,48,1651	0/0:23,0:23:69.24:0,69,2403	0/0:30,0:30:87.23:0,87,2750	0/0:14,0:14:42.14:0,42,1449
chr10	38650311	.	ATG	A	952.08	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=7.596;DP=628;FS=3.384;HRun=0;HaplotypeScore=113.7032;InbreedingCoeff=0.8030;MQ=58.69;MQ0=5;MQRankSum=-1.404;QD=13.22;ReadPosRankSum=2.535;VQSLOD=3.3625;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:60.63:0,61,1096	0/0:3,0:3:9.02:0,9,137	0/0:42,0:28:59.71:0,60,1140	0/0:44,0:31:75.40:0,75,1282	0/0:16,0:16:17.17:0,17,269	0/0:34,0:34:99:0,102,1880	0/0:22,0:22:59.22:0,59,1055	0/0:42,0:42:99:0,126,2196	0/0:26,0:26:47.41:0,47,773	0/0:19,0:19:57.20:0,57,1106	0/0:17,0:17:51.17:0,51,1006	1/1:4,16:20:30.02:440,30,0	0/1:17,0:17:27.87:28,0,364	0/0:18,0:18:33.10:0,33,507	0/0:22,0:22:30.09:0,30,477	0/0:12,0:12:12.04:0,12,184	0/0:13,0:13:15.01:0,15,215	0/0:14,0:14:37.90:0,38,611	0/0:11,0:9:27.08:0,27,449	0/0:30,0:30:90.27:0,90,1603	0/0:41,0:40:99:0,117,2085	0/0:17,0:17:48.15:0,48,878	1/1:3,13:15:20.69:278,21,0	1/1:4,15:19:24:354,24,0	0/0:16,0:16:48.15:0,48,848	0/0:24,0:24:72.22:0,72,1248	0/0:29,0:29:26.75:0,27,1293	0/0:15,0:15:45.14:0,45,803
chr10	38650558	.	GA	G	1129.70	PASS	AB=0.697;AC=8;AF=0.143;AN=56;BaseQRankSum=6.672;DP=499;FS=132.381;HRun=3;HaplotypeScore=48.9944;InbreedingCoeff=-0.1676;MQ=75.30;MQ0=0;MQRankSum=-8.724;QD=10.09;ReadPosRankSum=4.259;VQSLOD=-0.1210;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:96.26:0,96,1338	0/1:1,1:2:31.08:31,0,37	0/0:12,0:11:32.94:0,33,435	0/0:21,0:21:60.03:0,60,828	0/1:16,12:28:99:208,0,349	0/0:16,0:16:48.16:0,48,689	0/0:19,0:19:51.17:0,51,734	0/0:42,0:42:99:0,120,1693	0/1:10,7:17:99:174,0,381	0/0:24,0:24:69.23:0,69,994	0/0:31,0:31:87.28:0,87,1236	0/0:17,0:17:51.17:0,51,727	0/1:8,8:16:99:251,0,255	0/1:7,4:11:99:118,0,224	0/1:9,10:19:99:313,0,328	0/1:5,2:7:53.07:53,0,193	0/1:6,6:12:99:118,0,227	0/0:8,0:8:15.05:0,15,216	0/0:20,0:20:51.17:0,51,733	0/0:14,0:14:39.13:0,39,560	0/0:24,0:24:72.22:0,72,1002	0/0:16,0:16:45.14:0,45,630	0/0:14,0:14:42.14:0,42,605	0/0:14,0:14:42.14:0,42,605	0/0:11,0:11:33.11:0,33,475	0/0:16,0:16:42.13:0,42,589	0/0:28,0:26:84.27:0,84,1192	0/0:7,0:7:21.07:0,21,302
chr10	38650759	.	T	TA	4368.81	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-8.906;DP=445;FS=10.186;HRun=8;HaplotypeScore=64.3016;InbreedingCoeff=0.9693;MQ=74.67;MQ0=1;MQRankSum=0.873;QD=27.48;ReadPosRankSum=3.098;VQSLOD=5.1900;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:42.02:0,42,383	1/1:0,4:4:12.03:137,12,0	0/0:37,0:24:11.31:0,11,150	0/0:15,0:7:8.96:0,9,59	1/1:1,14:15:39.07:433,39,0	0/0:13,0:13:39.02:0,39,357	0/0:7,0:7:12:0,12,110	0/0:36,0:36:86.95:0,87,792	1/1:1,15:16:39.12:450,39,0	0/0:24,0:24:69.04:0,69,631	0/0:13,0:13:33:0,33,302	1/1:3,16:19:39.11:446,39,0	1/1:2,14:16:33.10:381,33,0	1/1:1,12:13:33.10:381,33,0	1/1:1,14:15:39.12:450,39,0	1/1:1,7:8:21.06:242,21,0	1/1:2,26:28:72.21:827,72,0	0/0:9,0:9:21.01:0,21,192	0/0:15,0:15:36.01:0,36,326	0/0:18,0:18:51.02:0,51,467	0/0:10,0:10:27.01:0,27,247	0/0:10,0:10:30.02:0,30,275	1/1:1,15:16:39.02:450,39,0	1/1:3,6:9:15.04:173,15,0	0/0:11,0:11:30.02:0,30,275	0/0:23,0:23:63.03:0,63,574	0/0:24,0:24:66.03:0,66,603	0/0:4,0:4:12.01:0,12,110
chr10	38650932	.	CATT	C	5501.39	PASS	AC=16;AF=0.296;AN=54;BaseQRankSum=11.414;DP=425;FS=4.358;HRun=0;HaplotypeScore=63.1964;InbreedingCoeff=0.9907;MQ=72.49;MQ0=0;MQRankSum=-0.667;QD=42.32;ReadPosRankSum=3.723;VQSLOD=6.1506;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:54.19:0,54,1223	1/1:0,9:9:27.09:460,27,0	0/0:8,0:8:24.08:0,24,492	0/0:5,0:5:12:0,12,223	1/1:1,31:32:78.20:1251,78,0	0/0:17,0:17:51.18:0,51,1157	0/0:8,0:8:24.08:0,24,553	0/0:37,0:37:99:0,105,2241	1/1:0,17:17:45.15:767,45,0	0/0:22,0:22:66.23:0,66,1504	0/0:25,0:25:75.24:0,75,1651	0/0:8,0:8:24.08:0,24,543	1/1:0,17:17:48.16:815,48,0	1/1:0,10:10:24.08:395,24,0	1/1:0,16:16:42.14:687,42,0	1/1:0,13:13:33.11:563,33,0	1/1:1,15:16:33.11:563,33,0	0/0:11,0:11:30.10:0,30,661	0/0:20,0:20:60.21:0,60,1353	0/0:20,0:20:57.19:0,57,1266	0/0:9,0:9:24.08:0,24,552	0/0:10,0:10:27.09:0,27,623	0/0:11,0:11:33.10:0,33,699	0/0:9,0:9:24.04:0,24,485	0/0:6,0:6:18.06:0,18,415	0/0:25,0:25:75.25:0,75,1629	0/0:25,0:24:69.22:0,69,1506	./.
chr10	38651074	.	G	GA	533.23	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=6.326;DP=418;FS=1.809;HRun=7;HaplotypeScore=48.6438;InbreedingCoeff=0.8722;MQ=80.62;MQ0=0;MQRankSum=-0.145;QD=22.22;ReadPosRankSum=0.208;VQSLOD=3.0891;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:69.11:0,69,665	0/0:10,0:10:30.05:0,30,290	0/0:18,0:14:5.23:0,5,198	0/0:15,0:13:11.38:0,11,94	0/0:17,0:17:45.07:0,45,433	0/0:19,0:19:54.07:0,54,515	0/0:19,0:19:45.06:0,45,434	0/0:25,0:25:72.06:0,72,682	0/0:20,0:20:54.07:0,54,516	0/0:22,0:22:54.08:0,54,521	0/0:10,0:10:30.05:0,30,290	1/1:1,4:5:9.03:109,9,0	0/0:15,0:15:42.06:0,42,405	0/0:10,0:10:27.04:0,27,261	0/0:10,0:10:30.05:0,30,290	0/0:15,0:15:42.06:0,42,401	0/0:17,0:17:51.08:0,51,492	0/0:11,0:11:24.03:0,24,231	0/0:16,0:16:39.05:0,39,376	0/0:15,0:15:42.07:0,42,405	0/0:8,0:8:21.03:0,21,203	0/0:4,0:4:12.02:0,12,116	1/1:1,12:13:7.15:370,7,0	1/1:0,6:6:15.05:181,15,0	0/0:16,0:16:45.02:0,45,424	0/0:25,0:25:69.10:0,69,662	0/0:25,0:25:72.11:0,72,695	0/0:6,0:6:18.03:0,18,174
chr10	38651710	.	G	GA	2382.10	PASS	AB=0.823;AC=35;AF=0.625;AN=56;BaseQRankSum=1.612;DP=426;FS=0.000;HRun=13;HaplotypeScore=60.2084;InbreedingCoeff=0.2505;MQ=60.07;MQ0=14;MQRankSum=-1.820;QD=7.76;ReadPosRankSum=0.167;VQSLOD=2.2214;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:20,0:20:53.74:54,0,162	1/1:4,0:4:2.96:19,3,0	0/0:29,0:6:12.81:0,13,65	0/1:26,0:11:18.67:19,0,63	1/1:6,11:17:6.40:194,6,0	0/0:5,0:7:13.93:0,14,88	0/0:18,0:17:29.28:0,29,202	0/1:15,8:19:49.37:140,0,49	1/1:7,11:19:26.19:273,26,0	0/0:17,0:19:30.74:0,31,195	0/0:28,0:27:45.46:0,45,293	1/1:1,0:4:5.64:27,6,0	0/1:4,4:8:11.57:47,0,12	1/1:2,12:14:18.02:167,18,0	0/1:4,4:9:6.45:110,0,6	1/1:5,4:9:15.02:139,15,0	1/1:7,20:27:45.05:418,45,0	0/0:13,0:14:25.76:0,26,170	0/1:16,1:16:11.28:168,0,11	1/1:5,4:10:7.92:128,8,0	0/1:8,6:14:9.16:61,0,9	0/1:5,0:5:8.95:13,0,9	1/1:4,0:17:13.97:78,14,0	1/1:1,1:16:23.61:116,24,0	1/1:0,6:7:2.28:50,2,0	1/1:8,9:15:7.81:185,8,0	1/1:4,5:10:5.17:78,5,0	0/1:5,3:9:5.60:83,0,6
chr10	38651829	.	G	GGAA	3513.45	PASS	AB=1.000;AC=27;AF=0.482;AN=56;BaseQRankSum=8.078;DP=446;FS=57.121;HRun=0;HaplotypeScore=126.1557;InbreedingCoeff=0.1566;MQ=55.42;MQ0=15;MQRankSum=-6.716;QD=12.24;ReadPosRankSum=-0.038;VQSLOD=0.7096;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:38:61.37:0,61,836	1/1:2,0:9:11.99:174,12,0	0/0:15,0:8:8.62:0,9,59	0/0:9,0:4:5.95:0,6,51	1/1:10,0:22:36.43:446,36,0	0/0:9,0:10:20.85:0,21,245	0/0:17,0:17:32.75:0,33,508	0/1:23,0:18:76.13:76,0,96	1/1:2,1:13:15.04:231,15,0	0/0:14,0:13:26.78:0,27,306	0/0:19,0:21:29.99:0,30,490	0/1:9,0:9:59.51:60,0,60	1/1:1,0:11:14.96:221,15,0	1/1:9,3:15:26.89:250,27,0	1/1:1,12:17:9.03:172,9,0	1/1:4,6:11:12.03:142,12,0	1/1:10,3:24:51.93:774,52,0	0/0:25,0:26:50.71:0,51,726	0/1:15,0:9:27.90:28,0,56	0/1:27,0:26:39.69:335,0,40	0/0:4,0:3:5.51:0,6,46	0/1:4,0:4:19.80:23,0,20	0/1:16,0:15:72.27:117,0,72	0/1:11,0:11:21.93:22,0,34	0/1:11,0:9:17.96:18,0,85	0/1:27,0:26:69.52:361,0,70	0/1:9,0:8:20.31:20,0,62	0/1:11,0:10:43.03:43,0,48
chr10	38652152	.	C	CA	4279.10	PASS	AB=0.550;AC=17;AF=0.304;AN=56;BaseQRankSum=-6.398;DP=450;FS=4.023;HRun=3;HaplotypeScore=59.6334;InbreedingCoeff=0.8897;MQ=87.85;MQ0=0;MQRankSum=-3.950;QD=35.36;ReadPosRankSum=-0.428;VQSLOD=5.2083;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:81.23:0,81,950	0/0:2,0:2:6.02:0,6,72	0/0:16,0:16:34.92:0,35,420	0/0:18,0:18:22.80:0,23,438	0/0:16,0:16:48.14:0,48,568	0/0:23,0:23:60.17:0,60,701	0/0:31,0:31:75.13:0,75,858	1/1:3,21:24:66.22:924,66,0	0/0:12,0:12:36.11:0,36,432	0/0:17,0:17:45.12:0,45,526	0/0:21,0:21:54.16:0,54,641	0/0:14,0:14:36.11:0,36,432	0/0:15,0:15:45.13:0,45,526	0/0:9,0:9:18.06:0,18,216	0/0:18,0:18:45.14:0,45,539	0/0:14,0:14:36.10:0,36,422	0/0:23,0:23:54.09:0,54,631	0/0:19,0:19:54.17:0,54,647	1/1:0,10:10:30.10:420,30,0	1/1:2,10:12:30.10:418,30,0	1/1:2,17:19:48.16:672,48,0	1/1:1,4:5:15.03:184,15,0	0/0:14,0:14:39.10:0,39,455	0/0:17,0:17:45.14:0,45,539	1/1:0,9:9:21.07:294,21,0	0/1:4,18:22:11.81:696,0,12	1/1:1,16:17:39.13:546,39,0	1/1:0,3:3:9.03:126,9,0
chr10	38652177	.	C	CT	2349.73	PASS	AB=0.758;AC=32;AF=0.571;AN=56;BaseQRankSum=0.579;DP=443;FS=0.000;HRun=14;HaplotypeScore=67.6317;InbreedingCoeff=0.4671;MQ=62.05;MQ0=4;MQRankSum=-1.249;QD=8.19;ReadPosRankSum=-3.076;VQSLOD=1.8640;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:18:32.39:0,32,209	1/1:2,0:2:5.94:42,6,0	0/0:6,0:2:2.94:0,3,18	0/1:10,0:9:5.96:6,0,11	0/1:12,16:30:9.40:193,0,9	0/0:22,0:22:43.93:0,44,273	0/0:20,1:21:9.08:0,9,184	1/1:23,8:30:24.70:265,25,0	1/1:7,6:14:18.85:154,19,0	0/0:16,0:15:17.62:0,18,114	0/0:23,0:22:41.11:0,41,264	0/0:13,0:12:11.73:0,12,77	1/1:5,8:13:15.28:133,15,0	1/1:4,9:13:12:106,12,0	1/1:2,9:13:13.41:220,13,0	0/1:5,6:11:20.54:88,0,21	0/1:7,15:21:11.79:133,0,12	0/0:21,0:20:50.15:0,50,324	1/1:8,7:15:10.66:203,11,0	1/1:9,8:15:2.61:141,3,0	1/1:8,1:9:2.97:20,3,0	1/1:6,5:10:20.49:165,20,0	0/0:12,0:14:25.59:0,26,157	0/1:9,1:10:11.69:12,0,62	1/1:5,3:8:8.99:77,9,0	1/1:16,10:25:35.93:304,36,0	0/1:17,8:25:15.90:225,0,16	1/1:7,0:7:8.89:63,9,0
chr10	38652680	.	AG	A	973.06	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=2.095;DP=443;FS=0.704;HRun=4;HaplotypeScore=52.9423;InbreedingCoeff=0.9820;MQ=81.63;MQ0=0;MQRankSum=-0.829;QD=24.33;ReadPosRankSum=1.042;VQSLOD=2.4029;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:75.25:0,75,1077	0/0:6,0:6:15.05:0,15,216	0/0:15,0:15:45.14:0,45,600	0/0:15,0:15:42.13:0,42,576	0/0:14,0:14:39.12:0,39,543	0/0:13,0:13:39.13:0,39,560	0/0:12,0:12:33.07:0,33,449	0/0:26,0:26:71.93:0,72,983	0/0:17,0:17:48.16:0,48,690	0/0:17,0:17:48.15:0,48,675	0/0:10,0:10:30.07:0,30,393	1/1:0,10:10:27.08:335,27,0	0/0:21,0:21:60.20:0,60,863	0/0:17,0:17:51.14:0,51,681	0/0:12,0:12:36.12:0,36,517	0/0:9,0:9:27.09:0,27,389	0/0:33,0:33:90.30:0,90,1287	0/0:22,0:22:66.22:0,66,946	0/0:25,0:25:72.23:0,72,1007	0/0:12,0:12:33.11:0,33,473	0/0:15,0:15:45.15:0,45,644	0/0:15,0:15:42.14:0,42,591	1/1:2,13:15:30.09:372,30,0	1/1:0,15:15:33.10:409,33,0	0/0:12,0:12:33.09:0,33,437	0/0:18,0:18:48.06:0,48,691	0/0:15,0:14:45.15:0,45,643	0/0:4,0:4:12.04:0,12,173
chr10	38653125	.	G	GT	4078.79	PASS	AC=16;AF=0.308;AN=52;BaseQRankSum=-3.290;DP=740;FS=20.538;HRun=1;HaplotypeScore=88.5051;InbreedingCoeff=0.9688;MQ=30.90;MQ0=131;MQRankSum=-2.040;QD=19.42;ReadPosRankSum=3.405;VQSLOD=2.6760;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:50:99:0,102,1320	1/1:2,12:13:21.07:314,21,0	./.	./.	1/1:7,25:27:42.06:580,42,0	0/0:26,0:21:57.17:0,57,724	0/0:29,0:18:45.15:0,45,583	0/0:38,0:10:30.10:0,30,389	1/1:5,22:20:39.13:577,39,0	0/0:24,0:21:57.18:0,57,736	0/0:17,0:16:36.12:0,36,464	0/0:20,0:16:32.97:0,33,424	1/1:5,23:24:44.89:672,45,0	1/1:3,18:19:30.10:437,30,0	1/1:4,26:23:42.14:628,42,0	1/1:3,26:28:24.08:359,24,0	1/1:10,19:19:36.04:511,36,0	0/0:40,0:27:42.07:0,42,524	0/0:25,0:12:33.11:0,33,428	0/0:34,0:34:86.07:0,86,1078	0/0:57,0:35:49.06:0,49,601	0/0:18,0:15:36.07:0,36,447	0/0:30,0:28:63.20:0,63,815	0/0:20,0:15:32.98:0,33,387	0/0:26,0:25:66.21:0,66,855	0/0:29,0:26:66.16:0,66,821	0/0:24,0:22:63.04:0,63,790	0/0:15,0:3:3.01:0,3,39
chr10	38653245	.	TCCTC	T	7182.52	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=16.507;DP=666;FS=14.485;HRun=0;HaplotypeScore=128.8516;InbreedingCoeff=0.9838;MQ=49.58;MQ0=5;MQRankSum=-13.878;QD=35.21;ReadPosRankSum=2.564;VQSLOD=4.4361;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:46:99:0,129,3291	1/1:4,9:13:30.10:545,30,0	0/0:28,0:14:10.51:0,11,875	0/0:21,0:15:45.15:0,45,1021	1/1:3,25:28:65.91:1036,66,0	0/0:25,0:25:66.23:0,66,1723	0/0:28,0:28:75.26:0,75,1857	0/0:27,0:22:66.23:0,66,1677	1/1:3,13:15:36.12:652,36,0	0/0:26,0:26:75.26:0,75,1925	0/0:20,0:20:54.19:0,54,1403	1/1:5,16:21:30.10:545,30,0	1/1:0,15:15:39.13:693,39,0	1/1:5,18:23:54.19:980,54,0	1/1:3,25:26:57.20:1035,57,0	1/1:4,11:15:27.09:490,27,0	1/1:1,12:13:24.04:388,24,0	0/0:26,0:25:60.21:0,60,1517	0/0:30,0:27:66.23:0,66,1676	0/0:25,0:25:75.26:0,75,1935	0/0:41,0:40:93.32:0,93,2413	0/0:31,0:31:90.31:0,90,2352	1/1:1,26:20:36.12:654,36,0	1/1:1,4:4:9.03:163,9,0	0/0:20,0:20:54.18:0,54,1413	0/0:29,0:29:81.28:0,81,2014	0/0:30,0:29:81.28:0,81,2082	0/0:6,0:6:18.04:0,18,417
chr10	38654046	.	A	ATT	5351.11	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=8.738;DP=585;FS=0.735;HRun=9;HaplotypeScore=84.2086;InbreedingCoeff=0.9972;MQ=78.10;MQ0=0;MQRankSum=-0.167;QD=26.76;ReadPosRankSum=1.787;VQSLOD=4.8625;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:48:99:0,123,1289	1/1:1,7:9:20.56:274,21,0	0/0:20,0:20:27.70:0,28,287	0/0:13,0:13:32.85:0,33,320	1/1:3,19:23:55.39:795,55,0	0/0:29,0:29:87.22:0,87,926	0/0:21,0:21:54.04:0,54,545	0/0:28,0:28:66.14:0,66,702	1/1:4,11:15:30.10:462,30,0	0/0:21,0:21:47.99:0,48,510	0/0:21,0:21:54.13:0,54,575	1/1:4,0:23:26.24:138,26,0	1/1:3,21:25:60.20:923,60,0	1/1:3,14:17:36.12:554,36,0	1/1:4,18:23:51.17:785,51,0	1/1:1,10:11:30.10:462,30,0	1/1:5,18:25:56.16:795,56,0	0/0:21,0:21:48.07:0,48,499	0/0:22,0:22:45.04:0,45,464	0/0:17,0:17:42.08:0,42,447	0/0:23,0:23:51.02:0,51,522	0/0:17,0:17:39.08:0,39,415	1/1:4,0:15:21.13:75,21,0	1/1:2,0:14:22.83:87,23,0	0/0:18,0:18:45.09:0,45,479	0/0:33,0:33:84.19:0,84,894	0/0:26,0:26:75.17:0,75,798	0/0:6,0:7:20.79:0,21,204
chr10	38654398	.	T	TA	3181.46	PASS	AC=22;AF=0.407;AN=54;BaseQRankSum=-10.494;DP=340;FS=0.000;HRun=8;HaplotypeScore=30.6658;InbreedingCoeff=0.9122;MQ=66.09;MQ0=0;MQRankSum=1.765;QD=28.92;ReadPosRankSum=3.486;VQSLOD=3.0303;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:42.02:0,42,384	1/1:0,8:8:24.07:277,24,0	0/0:6,0:3:6:0,6,53	0/0:10,0:7:4.24:0,4,30	1/1:0,24:24:72.21:831,72,0	0/0:11,0:11:30.02:0,30,274	0/0:4,0:4:12.01:0,12,110	0/0:31,0:31:75:0,75,678	1/1:0,3:3:9.03:104,9,0	0/0:23,0:23:60:0,60,544	0/0:19,0:19:54:0,54,485	1/1:2,3:5:9.03:104,9,0	1/1:0,4:4:12.04:138,12,0	1/1:1,12:13:36.11:415,36,0	1/1:1,11:12:27.08:312,27,0	1/1:1,4:5:12.04:139,12,0	1/1:1,28:29:75.22:865,75,0	0/0:16,0:16:30:0,30,275	0/0:9,0:9:21:0,21,189	0/0:23,0:23:54.03:0,54,494	0/0:6,0:6:15:0,15,137	./.	1/1:0,3:3:9.03:104,9,0	1/1:1,3:4:9.03:104,9,0	0/0:14,0:14:33.01:0,33,302	0/0:15,0:15:39.01:0,39,354	0/0:18,0:17:50.98:0,51,458	0/0:10,0:10:29.99:0,30,268
chr10	38654655	.	CA	C	362.06	PASS	AB=1.000;AC=10;AF=0.179;AN=56;BaseQRankSum=-0.514;DP=481;FS=0.000;HRun=10;HaplotypeScore=63.8915;InbreedingCoeff=0.4982;MQ=84.23;MQ0=0;MQRankSum=-0.955;QD=3.85;ReadPosRankSum=-3.265;VQSLOD=-0.7277;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:78.18:0,78,845	0/0:10,0:10:24.05:0,24,257	0/0:34,0:19:34.88:0,35,285	0/0:27,0:20:16.46:0,16,119	0/0:20,0:20:54.12:0,54,580	0/0:25,0:25:69.13:0,69,742	0/0:10,0:10:27.06:0,27,291	0/1:22,0:22:3.73:4,0,101	0/0:20,0:20:57.13:0,57,621	0/0:19,0:19:54.10:0,54,574	0/0:18,0:18:45.11:0,45,490	1/1:5,5:10:29.93:249,30,0	0/0:9,0:9:27.06:0,27,289	0/0:17,1:18:22.08:0,22,472	0/0:13,0:13:30.01:0,30,316	0/0:12,0:12:36.07:0,36,381	0/0:26,0:26:72.07:0,72,767	0/0:11,0:11:30:0,30,298	0/1:18,0:18:16.09:16,0,83	0/0:21,0:21:27.97:0,28,187	0/1:7,0:7:6.79:7,0,43	0/0:8,0:8:21.81:0,22,93	1/1:3,4:7:8.97:74,9,0	1/1:2,2:4:6:52,6,0	0/0:18,0:18:45.10:0,45,186	0/1:26,0:26:79.85:108,0,80	0/0:32,0:32:71.38:0,71,306	0/0:8,0:8:21.52:0,22,90
chr10	38654702	.	TA	T	978.47	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=7.206;DP=486;FS=6.942;HRun=5;HaplotypeScore=57.8202;InbreedingCoeff=0.9942;MQ=84.34;MQ0=0;MQRankSum=-0.819;QD=27.96;ReadPosRankSum=-0.738;VQSLOD=3.3594;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:81.23:0,81,1074	0/0:8,0:8:24.08:0,24,328	0/0:13,1:13:33.08:0,33,406	0/0:20,0:19:41.59:0,42,549	0/0:23,0:23:63.20:0,63,845	0/0:22,0:22:54.18:0,54,734	0/0:9,0:9:24.08:0,24,328	0/0:15,0:15:39.09:0,39,500	0/0:28,0:28:81.27:0,81,1107	0/0:15,0:15:45.15:0,45,612	0/0:20,0:20:57.18:0,57,762	1/1:2,12:14:36.10:406,36,0	0/0:14,0:14:39.13:0,39,533	0/0:18,0:18:54.17:0,54,724	0/0:17,0:17:51.17:0,51,698	0/0:19,0:19:57.18:0,57,764	0/0:23,0:23:63.20:0,63,848	0/0:11,0:11:27.09:0,27,369	0/0:16,0:16:33.10:0,33,436	0/0:24,0:24:72.24:0,72,984	0/0:13,0:13:39.13:0,39,533	0/0:8,0:8:24.08:0,24,328	1/1:0,15:15:45.13:510,45,0	1/1:0,6:6:18.05:204,18,0	0/0:26,0:26:72.23:0,72,971	0/0:21,0:21:60.19:0,60,807	0/0:24,0:24:69.22:0,69,927	0/0:14,0:14:39.11:0,39,515
chr10	38655014	.	T	TTAA	8269.29	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-13.724;DP=564;FS=1.655;HRun=0;HaplotypeScore=73.5755;InbreedingCoeff=0.9902;MQ=90.99;MQ0=0;MQRankSum=-5.721;QD=59.49;ReadPosRankSum=2.501;VQSLOD=6.7408;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:84.27:0,84,1372	1/1:1,11:12:36.12:787,36,0	0/0:26,0:26:72.20:0,72,1161	0/0:19,0:19:42.14:0,42,684	1/1:1,23:24:66.18:1446,66,0	0/0:32,0:32:90.29:0,90,1474	0/0:18,0:18:54.18:0,54,873	0/0:26,0:26:75.25:0,75,1226	1/1:0,13:13:39.13:884,39,0	0/0:23,0:23:66.23:0,66,1099	0/0:23,0:23:60.19:0,60,970	0/0:15,0:15:45.14:0,45,725	1/1:1,17:18:51.18:1132,51,0	1/1:4,15:19:51.17:1103,51,0	1/1:2,14:18:39.13:803,39,0	1/1:0,20:20:60.21:1359,60,0	1/1:2,13:15:35.48:756,35,0	0/0:18,0:18:51.14:0,51,820	0/0:15,0:15:42.13:0,42,673	0/0:23,0:23:69.24:0,69,1147	0/0:22,0:22:63.20:0,63,1023	0/0:21,0:21:60.19:0,60,970	0/0:18,0:18:51.17:0,51,849	0/0:15,0:15:45.14:0,45,725	0/0:20,0:20:57.19:0,57,949	0/0:26,0:26:78.27:0,78,1299	0/0:31,0:31:90.31:0,90,1499	0/0:4,0:4:9.03:0,9,150
chr10	38656146	.	CA	C	4195.03	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=8.645;DP=582;FS=2.067;HRun=9;HaplotypeScore=65.1891;InbreedingCoeff=0.9894;MQ=61.16;MQ0=1;MQRankSum=-1.978;QD=22.43;ReadPosRankSum=0.128;VQSLOD=4.3877;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:99:0,99,1132	0/0:11,0:11:33.10:0,33,381	0/0:17,0:15:33.10:0,33,376	0/0:19,0:15:26.84:0,27,302	0/0:28,0:28:78.23:0,78,900	0/0:24,0:24:60.18:0,60,692	0/0:23,0:23:57.14:0,57,636	1/1:6,22:28:66.03:604,66,0	0/0:27,0:27:72.17:0,72,796	0/0:19,0:19:54.15:0,54,616	0/0:21,0:21:60.17:0,60,683	0/0:5,0:15:28.88:0,29,172	0/0:18,0:19:57:0,57,636	0/0:23,0:23:69.19:0,69,786	0/0:21,1:22:29.70:0,30,596	0/0:15,0:15:39.12:0,39,450	0/0:38,0:38:99:0,111,1270	0/0:18,0:18:48.14:0,48,554	1/1:4,17:21:51.02:467,51,0	1/1:0,13:13:36.02:329,36,0	1/1:5,20:25:60.02:549,60,0	1/1:5,22:27:60.02:549,60,0	0/0:3,0:13:34.31:0,34,182	0/0:2,0:10:19.89:0,20,101	1/1:4,11:15:33.01:302,33,0	1/1:3,20:23:60.01:544,60,0	1/1:3,29:32:83.82:769,84,0	1/1:0,3:3:9:82,9,0
chr10	38656345	.	T	TA	4683.15	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-6.031;DP=397;FS=1.347;HRun=6;HaplotypeScore=41.7638;InbreedingCoeff=0.9865;MQ=61.23;MQ0=0;MQRankSum=2.134;QD=30.81;ReadPosRankSum=1.914;VQSLOD=5.1518;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:84.15:0,84,841	1/1:0,8:8:24.08:302,24,0	0/0:5,0:4:12.03:0,12,122	0/0:13,0:11:26.66:0,27,259	1/1:1,17:18:51.12:624,51,0	0/0:13,0:13:36.08:0,36,367	0/0:16,0:16:39.08:0,39,398	0/0:20,0:20:51.11:0,51,520	1/1:2,12:14:30.10:378,30,0	0/0:10,0:10:30.07:0,30,306	0/0:11,0:11:30.06:0,30,306	1/1:4,12:16:33.11:415,33,0	1/1:1,12:13:36.12:453,36,0	1/1:2,9:11:25.32:304,25,0	1/1:0,12:12:36.12:453,36,0	1/1:2,6:8:21.03:247,21,0	1/1:3,22:25:60.19:752,60,0	0/0:16,0:16:39.08:0,39,398	0/0:17,0:17:42.09:0,42,428	0/0:13,0:13:36.07:0,36,360	0/0:21,0:21:48.05:0,48,480	0/0:7,0:7:15.03:0,15,153	1/1:1,11:12:21.54:265,22,0	1/1:1,14:15:39.12:491,39,0	0/0:10,0:10:24.05:0,24,245	0/0:17,0:17:51.12:0,51,520	0/0:17,0:17:48.11:0,48,488	0/0:4,0:4:12.03:0,12,122
chr10	38656537	.	T	TA	2773.86	PASS	AB=0.600;AC=17;AF=0.304;AN=56;BaseQRankSum=-11.298;DP=367;FS=8.050;HRun=9;HaplotypeScore=44.2540;InbreedingCoeff=0.8106;MQ=56.09;MQ0=16;MQRankSum=-0.525;QD=22.55;ReadPosRankSum=-1.105;VQSLOD=3.6312;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:59.99:0,60,521	0/0:4,0:4:6:0,6,52	0/0:11,0:4:3.47:0,3,28	0/0:6,0:3:5.04:0,5,17	0/0:16,0:12:26.98:0,27,234	0/0:13,0:12:23.99:0,24,208	0/0:14,0:11:23.91:0,24,199	1/1:10,18:22:54.15:597,54,0	0/0:9,0:9:17.97:0,18,151	0/0:11,0:10:26.99:0,27,234	0/0:16,0:15:38.99:0,39,339	0/0:10,0:10:24:0,24,208	0/0:3,0:3:9:0,9,78	0/0:8,0:8:24:0,24,208	0/0:9,0:9:26.99:0,27,234	0/0:9,0:8:20.99:0,21,180	0/0:42,0:39:71.94:0,72,613	0/0:25,0:24:63.98:0,64,595	1/1:5,11:16:31.93:363,32,0	1/1:0,9:9:27.07:299,27,0	1/1:1,4:5:12.03:133,12,0	1/1:0,1:1:3.01:33,3,0	0/0:6,0:6:15.47:0,15,132	0/0:3,0:3:9:0,9,78	1/1:3,17:19:48.13:531,48,0	1/1:3,14:15:41.93:437,42,0	1/1:2,14:16:39.11:431,39,0	0/1:3,6:8:8:148,0,8
chr10	38656551	.	CA	C	1741.64	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=0.386;DP=374;FS=1.692;HRun=8;HaplotypeScore=50.0140;InbreedingCoeff=0.8792;MQ=60.74;MQ0=2;MQRankSum=4.087;QD=18.14;ReadPosRankSum=1.895;VQSLOD=3.4445;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:60.18:0,60,724	1/1:0,3:3:9.01:87,9,0	0/0:14,0:7:8.08:0,8,122	0/1:5,0:3:1.52:2,0,32	1/1:2,13:14:36.05:348,36,0	0/0:14,0:13:24.07:0,24,289	0/0:11,0:12:29.92:0,30,324	0/0:27,0:27:75.21:0,75,883	1/1:1,6:7:18.03:174,18,0	0/0:12,0:11:30.09:0,30,362	0/0:15,0:15:45.14:0,45,543	0/0:9,0:9:18.06:0,18,217	1/1:0,5:5:12.02:116,12,0	1/1:1,7:8:21.03:203,21,0	1/1:1,8:9:24.03:232,24,0	1/1:0,10:10:21.03:203,21,0	1/1:4,29:33:60.09:578,60,0	0/0:30,0:29:75.21:0,75,893	0/0:23,0:23:65.85:0,66,753	0/0:9,0:9:21.02:0,21,237	0/0:4,0:4:12.04:0,12,145	0/0:1,0:1:3.01:0,3,36	0/0:7,0:7:21.06:0,21,254	0/0:6,0:6:18.06:0,18,217	0/0:21,0:20:57.17:0,57,688	0/0:19,0:19:57.17:0,57,688	0/0:17,0:16:42.13:0,42,506	0/0:5,0:5:12.04:0,12,145
chr10	38656783	.	AAG	A	1269.94	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=0.974;DP=576;FS=1.365;HRun=0;HaplotypeScore=81.3985;InbreedingCoeff=0.9959;MQ=67.98;MQ0=4;MQRankSum=0.320;QD=25.92;ReadPosRankSum=2.832;VQSLOD=4.4888;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:34:96.23:0,96,1461	0/0:9,0:9:24.08:0,24,407	0/0:18,0:14:39.07:0,39,544	0/0:11,0:10:25.89:0,26,347	0/0:26,0:26:75.06:0,75,1174	0/0:14,0:14:42.06:0,42,627	0/0:29,0:29:81.20:0,81,1264	0/0:23,0:23:54.06:0,54,748	0/0:29,0:29:81.24:0,81,1295	0/0:11,0:11:33.06:0,33,485	0/0:9,0:9:24.08:0,24,407	1/1:5,13:18:36.01:482,36,0	0/0:23,0:23:48.15:0,48,773	0/0:19,0:19:54.16:0,54,853	0/0:30,0:30:81.23:0,81,1294	0/0:19,0:19:54.14:0,54,828	0/0:40,0:40:99:0,114,1792	0/0:30,0:28:63.09:0,63,976	0/0:17,0:17:44.82:0,45,634	0/0:18,0:17:44.95:0,45,638	0/0:26,0:26:77.99:0,78,1149	0/0:15,0:15:39.04:0,39,558	1/1:1,10:11:21.07:283,21,0	1/1:1,19:19:48.16:647,48,0	0/0:11,0:11:30.08:0,30,457	0/0:30,0:30:81.10:0,81,1149	0/0:25,0:25:66.19:0,66,1059	0/0:10,0:9:26.98:0,27,422
chr10	38657655	.	G	GC	2365.83	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-7.530;DP=641;FS=1.624;HRun=4;HaplotypeScore=64.7403;InbreedingCoeff=0.9997;MQ=89.82;MQ0=0;MQRankSum=-2.826;QD=33.80;ReadPosRankSum=3.115;VQSLOD=4.3753;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:81.23:0,81,919	0/0:16,0:16:48.12:0,48,534	0/0:25,0:25:69.16:0,69,763	0/0:25,0:25:72.20:0,72,812	0/0:35,0:35:99:0,102,1123	0/0:16,0:16:48.12:0,48,535	0/0:29,0:29:78.21:0,78,874	0/0:21,0:21:60.16:0,60,666	0/0:21,0:21:57.16:0,57,646	0/0:33,0:33:96.27:0,96,1088	0/0:17,0:17:48.11:0,48,524	1/1:1,24:25:66.22:902,66,0	0/0:15,0:15:45.13:0,45,510	0/0:22,0:22:66.19:0,66,748	0/0:16,0:16:48.14:0,48,544	0/0:10,0:10:30.07:0,30,331	0/0:30,0:30:84.20:0,84,930	0/0:18,0:18:51.14:0,51,579	0/0:25,0:25:69.20:0,69,781	0/0:28,0:28:75.20:0,75,841	0/0:33,0:33:96.24:0,96,1068	0/0:22,0:22:60.17:0,60,681	1/1:1,25:26:41.21:951,41,0	1/1:0,19:19:48.16:656,48,0	0/0:30,0:30:90.24:0,90,1012	0/0:13,0:13:36.10:0,36,408	0/0:31,0:31:81.23:0,81,919	0/0:12,0:12:36.06:0,36,394
chr10	38657815	.	TACACACACATACACATAC	T	5801.67	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=5.896;DP=491;FS=16.336;HRun=0;HaplotypeScore=215.8941;InbreedingCoeff=0.8245;MQ=57.57;MQ0=7;MQRankSum=-6.744;QD=37.19;ReadPosRankSum=3.571;VQSLOD=2.7621;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:60.07:0,60,2554	1/1:1,4:5:6.02:301,6,0	0/0:19,0:10:24.05:0,24,654	0/0:35,0:16:22.65:0,23,779	1/1:3,16:21:9.03:421,9,0	0/0:15,0:15:39.09:0,39,2341	0/0:22,0:22:44.93:0,45,1669	0/0:21,0:20:48.15:0,48,1794	1/1:1,12:16:30.10:1430,30,0	0/0:19,0:19:48.15:0,48,2319	0/0:15,0:15:36.11:0,36,2487	0/0:16,0:16:21.38:0,21,594	1/1:1,10:11:12.04:602,12,0	1/1:2,16:19:18.06:835,18,0	1/1:2,16:18:18.06:891,18,0	1/1:1,3:4:6.02:301,6,0	1/1:28,3:32:44.06:983,44,0	0/0:19,0:19:48.13:0,48,3126	0/0:19,0:18:51.12:0,51,1764	0/0:16,0:16:24.05:0,24,793	0/0:17,0:16:28.57:0,29,1015	0/0:13,0:13:15.01:0,15,535	0/0:18,0:18:2.28:0,2,61	0/1:30,0:30:36.77:37,0,857	0/0:15,0:15:21.03:0,21,594	0/0:14,0:14:42.14:0,42,2147	0/0:10,0:10:24.05:0,24,1327	0/0:6,0:6:15.05:0,15,429
chr10	38657823	.	CATACACAT	C	3483.47	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=8.476;DP=490;FS=15.014;HRun=0;HaplotypeScore=147.2481;InbreedingCoeff=0.8503;MQ=54.38;MQ0=10;MQRankSum=-6.722;QD=18.43;ReadPosRankSum=5.079;VQSLOD=1.6144;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:63.08:0,63,1563	1/1:4,0:4:6.02:121,6,0	0/0:20,0:10:24.05:0,24,442	0/0:36,0:14:22.62:0,23,498	1/1:18,0:18:9.03:171,9,0	0/0:15,0:15:42.10:0,42,1297	0/0:20,0:20:53.62:0,54,1215	0/0:27,0:26:48.68:0,49,1062	1/1:15,0:15:30.10:590,30,0	0/0:21,0:20:51.16:0,51,1314	0/0:17,0:17:48.15:0,48,1539	1/1:0,14:20:21.06:312,21,0	1/1:10,0:10:12.04:242,12,0	1/1:18,0:18:18.06:331,18,0	1/1:16,0:16:18.06:351,18,0	1/1:3,0:3:6.02:121,6,0	1/1:28,0:29:49.85:710,50,0	0/0:17,0:17:33.14:0,33,1631	0/0:19,0:18:54.01:0,54,956	0/0:16,0:16:24.05:0,24,471	0/0:18,0:15:28.58:0,29,472	0/0:12,0:12:17.88:0,18,322	1/1:0,13:18:3.01:88,3,0	1/1:19,0:27:21.89:428,22,0	0/0:16,0:16:21.03:0,21,338	0/0:16,0:16:46.03:0,46,1211	0/1:11,0:11:18.09:18,0,531	0/0:5,0:5:15.05:0,15,256
chr10	38657827	.	CACAT	C	1611.33	PASS	AB=1.000;AC=24;AF=0.429;AN=56;BaseQRankSum=10.457;DP=491;FS=2.303;HRun=0;HaplotypeScore=125.2150;InbreedingCoeff=0.8121;MQ=50.78;MQ0=12;MQRankSum=-5.896;QD=7.43;ReadPosRankSum=2.958;VQSLOD=2.8569;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:48.03:0,48,873	1/1:4,0:4:6.01:56,6,0	0/0:18,0:7:21.04:0,21,207	0/0:37,0:14:22.05:0,22,188	1/1:18,0:18:8.97:76,9,0	0/0:16,0:16:38.99:0,39,667	0/0:20,0:20:49.26:0,49,718	0/1:27,0:26:4.47:4,0,536	1/1:15,0:15:29.97:271,30,0	0/0:20,0:18:48.09:0,48,774	0/0:17,0:17:23.96:0,24,853	1/1:14,6:20:21.06:255,21,0	1/1:10,0:10:12.01:112,12,0	1/1:17,0:17:17.62:140,18,0	1/1:16,0:16:17.89:156,18,0	1/1:3,0:3:6.01:56,6,0	1/1:27,0:27:41.76:316,42,0	0/0:17,0:17:45.84:0,46,953	0/0:18,0:17:39.61:0,40,519	0/0:21,0:21:18:0,18,203	0/0:18,0:15:25.36:0,25,208	0/0:11,0:11:8.36:0,8,116	1/1:13,5:18:3.48:32,3,0	1/1:23,8:31:36.35:343,36,0	0/0:18,0:18:11.90:0,12,120	0/0:17,0:17:43.86:0,44,649	0/1:11,0:11:2.10:2,0,250	0/0:5,0:5:14.91:0,15,140
chr10	38657831	.	T	TACACACACAC	1895.70	PASS	AB=1.000;AC=19;AF=0.352;AN=54;BaseQRankSum=-2.600;DP=507;FS=22.920;HRun=0;HaplotypeScore=172.1329;InbreedingCoeff=0.5351;MQ=50.74;MQ0=13;MQRankSum=-2.627;QD=8.31;ReadPosRankSum=-4.940;VQSLOD=-0.4225;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:36.07:0,36,832	0/0:4,0:4:6.02:0,6,124	0/0:19,0:8:2.92:0,3,17	0/1:34,0:13:0.96:1,0,10	0/0:18,0:18:6.02:0,6,138	0/0:16,0:18:24.04:0,24,524	0/0:19,0:20:30.41:0,30,567	1/1:31,0:30:42.76:456,43,0	0/0:15,0:15:30.02:0,30,562	0/0:17,0:16:2.14:0,2,492	0/0:15,0:17:15.57:0,16,697	0/1:20,0:20:67.54:68,0,99	0/0:10,0:10:12.04:0,12,241	0/0:18,0:18:15.02:0,15,300	0/0:16,0:16:18.04:0,18,370	0/0:3,0:3:6.02:0,6,139	0/0:27,0:27:2:0,2,380	0/0:18,0:18:18.07:0,18,784	1/1:18,0:17:15.82:193,16,0	1/1:10,9:23:3.01:90,3,0	./.	1/1:12,0:12:12:132,12,0	0/0:18,0:18:3.01:0,3,40	0/1:30,0:30:73.08:73,0,170	1/1:8,10:22:3.01:149,3,0	1/1:20,0:19:27.29:542,27,0	1/1:11,0:11:16.09:218,16,0	1/1:5,1:7:3.01:149,3,0
chr10	38657861	.	C	CACACACACAC	3657.32	PASS	AB=1.000;AC=19;AF=0.352;AN=54;BaseQRankSum=-2.127;DP=565;FS=14.751;HRun=0;HaplotypeScore=207.0038;InbreedingCoeff=0.5268;MQ=53.46;MQ0=8;MQRankSum=-3.515;QD=14.34;ReadPosRankSum=-5.219;VQSLOD=-0.0096;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:36.07:0,36,832	0/0:11,0:11:6.02:0,6,124	0/0:17,0:9:2.92:0,3,17	0/0:14,0:8:1.79:0,2,21	0/0:26,0:26:6.02:0,6,138	0/0:18,0:18:24.04:0,24,524	0/0:23,0:23:30.28:0,30,566	1/1:30,0:28:45.03:662,45,0	0/0:19,0:19:30.02:0,30,562	0/0:22,0:20:2.14:0,2,492	0/0:28,0:28:15.62:0,16,697	0/1:22,0:22:67.54:68,0,99	0/0:16,0:16:12.04:0,12,241	0/0:17,0:17:15.02:0,15,300	0/0:20,0:20:18.04:0,18,370	0/0:6,0:6:6.02:0,6,139	0/1:31,0:31:36.03:36,0,229	0/0:20,0:20:18.07:0,18,784	1/1:25,0:25:26.98:627,27,0	1/1:25,0:25:2.85:91,3,0	./.	1/1:16,0:16:12:132,12,0	0/0:18,0:18:3.01:0,3,40	0/1:26,0:26:75.74:76,0,191	1/1:24,0:24:5.82:276,6,0	1/1:15,6:23:45.55:969,46,0	1/1:22,0:22:25.19:461,25,0	1/1:10,0:10:6.02:260,6,0
chr10	38658269	.	GAA	G	2607.58	PASS	AB=0.686;AC=25;AF=0.446;AN=56;BaseQRankSum=7.477;DP=591;FS=1.362;HRun=14;HaplotypeScore=95.1937;InbreedingCoeff=0.6493;MQ=70.67;MQ0=6;MQRankSum=-1.008;QD=9.84;ReadPosRankSum=5.822;VQSLOD=2.2368;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:43:95.89:0,96,1087	1/1:4,9:12:14.23:213,14,0	0/0:31,0:14:15.77:0,16,166	0/0:34,0:23:13.63:0,14,121	1/1:14,9:23:9.90:182,10,0	0/0:11,0:11:27.09:0,27,372	0/1:11,0:13:1.26:1,0,221	0/1:10,1:21:4.59:5,0,151	1/1:9,7:15:7.87:172,8,0	0/0:29,1:31:26.39:0,26,642	0/0:16,0:19:50.03:0,50,562	1/1:1,12:14:32.70:280,33,0	0/1:11,8:19:8.43:179,0,8	1/1:4,7:11:3.61:140,4,0	1/1:7,8:16:32.93:295,33,0	1/1:9,12:21:26.14:250,26,0	1/1:6,18:27:16.20:438,16,0	0/0:24,0:25:48.76:0,49,681	0/0:13,0:24:18.64:0,19,204	0/0:8,0:21:36.09:0,36,266	0/0:8,0:18:15.47:0,15,67	0/0:7,0:18:17.24:0,17,117	1/1:5,14:18:18.92:191,19,0	1/1:3,21:23:41.98:389,42,0	0/1:5,1:16:3.85:4,0,71	0/0:9,1:27:10.17:0,10,160	0/0:6,1:22:11.05:0,11,125	0/1:4,3:11:45.77:73,0,46
chr10	38658285	.	G	GA	3545.20	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=7.170;DP=605;FS=0.440;HRun=7;HaplotypeScore=87.5748;InbreedingCoeff=0.9927;MQ=69.56;MQ0=8;MQRankSum=-0.577;QD=23.32;ReadPosRankSum=2.212;VQSLOD=3.6907;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,111,1043	1/1:3,14:16:36.10:412,36,0	0/0:40,0:13:19.35:0,19,149	0/0:34,0:20:14.10:0,14,165	1/1:2,18:19:48.09:532,48,0	0/0:11,0:11:24.03:0,24,231	0/0:14,0:14:33.04:0,33,318	0/0:26,0:26:69.09:0,69,657	1/1:3,11:13:21.06:236,21,0	0/0:27,0:26:66.10:0,66,635	0/0:25,0:24:48.02:0,48,454	0/0:13,0:13:35.40:0,35,316	1/1:12,5:17:42.12:486,42,0	1/1:3,14:17:24.05:266,24,0	1/1:5,13:18:26.49:273,26,0	1/1:10,9:19:51.04:559,51,0	1/1:14,16:30:72.10:781,72,0	0/0:25,0:25:62.75:0,63,603	0/0:27,0:27:69.06:0,69,654	0/0:21,0:21:60.04:0,60,559	0/0:10,0:10:21.01:0,21,194	0/0:17,0:17:48.02:0,48,447	0/0:14,0:13:21.03:0,21,200	0/0:24,0:23:42:0,42,394	0/0:20,0:20:44.95:0,45,414	0/0:27,0:27:66.08:0,66,630	0/0:23,0:23:63.07:0,63,588	0/0:12,0:12:36.06:0,36,345
chr10	38660174	.	C	CAAA	8211.74	PASS	AB=0.714;AC=39;AF=0.696;AN=56;BaseQRankSum=0.239;DP=537;FS=0.904;HRun=13;HaplotypeScore=94.0525;InbreedingCoeff=0.7829;MQ=70.30;MQ0=1;MQRankSum=-2.573;QD=23.00;ReadPosRankSum=-4.138;VQSLOD=3.1018;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:18:4.65:0,5,290	1/1:0,5:7:15.03:226,15,0	0/0:21,0:11:1.20:0,1,72	0/0:23,0:20:5.04:0,5,66	1/1:5,16:29:69.97:964,70,0	0/0:30,0:31:61.27:0,61,659	0/0:11,0:11:30.02:0,30,311	1/1:14,10:26:44.10:611,44,0	1/1:6,6:14:24.06:364,24,0	0/0:22,0:24:42.53:0,43,453	0/0:27,0:31:45.84:0,46,671	1/1:3,4:10:8.99:100,9,0	0/1:6,2:10:6.90:300,0,7	1/1:5,8:14:18.06:303,18,0	1/1:8,17:28:30.08:474,30,0	1/1:4,9:19:34.27:440,34,0	1/1:6,15:23:4.17:432,4,0	0/0:18,0:19:53.93:0,54,540	1/1:8,3:12:21.04:299,21,0	1/1:4,18:28:66.01:888,66,0	1/1:4,5:9:24.01:357,24,0	1/1:5,1:12:19.23:206,19,0	1/1:9,6:19:43.23:458,43,0	1/1:3,9:14:9.01:130,9,0	1/1:4,12:18:37.29:570,37,0	1/1:10,14:28:21.72:614,22,0	1/1:12,13:26:24.06:368,24,0	1/1:3,5:8:6.02:107,6,0
chr10	38661346	.	TG	T	3416.58	PASS	AB=0.929;AC=45;AF=0.804;AN=56;BaseQRankSum=0.751;DP=445;FS=10.681;HRun=12;HaplotypeScore=56.5534;InbreedingCoeff=0.4323;MQ=72.42;MQ0=1;MQRankSum=-0.413;QD=8.56;ReadPosRankSum=4.197;VQSLOD=1.3278;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:9:0,9,79	1/1:3,4:7:5.96:46,6,0	0/1:19,1:15:29.12:34,0,29	0/1:16,0:13:4.37:4,0,50	1/1:7,10:20:30:203,30,0	0/1:16,2:17:14.23:14,0,46	0/0:21,0:21:21.04:0,21,212	1/1:9,6:15:14.91:116,15,0	1/1:1,8:9:20.92:163,21,0	0/1:20,1:21:11.16:11,0,78	0/0:10,0:10:8.98:0,9,81	1/1:4,12:16:23.87:186,24,0	1/1:10,9:19:23.87:185,24,0	1/1:5,4:9:8.93:70,9,0	1/1:5,10:15:26.89:209,27,0	1/1:10,16:25:43.95:346,44,0	1/1:3,6:9:16.95:122,17,0	0/1:8,2:10:8.21:8,0,107	1/1:8,2:12:10.04:58,10,0	1/1:5,11:17:20.41:146,20,0	1/1:6,6:12:14.94:116,15,0	1/1:11,10:20:23.88:185,24,0	1/1:7,10:17:29.88:232,30,0	1/1:6,12:18:38.63:302,39,0	1/1:6,8:14:14.93:116,15,0	1/1:14,7:23:18.98:126,19,0	1/1:8,14:22:35.79:279,36,0	1/1:4,7:11:17.91:139,18,0
chr10	38662067	.	GTT	G	5153.04	PASS	AB=0.789;AC=34;AF=0.607;AN=56;BaseQRankSum=1.678;DP=434;FS=0.454;HRun=10;HaplotypeScore=68.1413;InbreedingCoeff=0.8315;MQ=64.91;MQ0=6;MQRankSum=-4.176;QD=20.95;ReadPosRankSum=1.761;VQSLOD=3.9904;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:62.13:0,62,830	1/1:1,2:3:3.01:33,3,0	0/1:30,0:14:0.38:0,0,190	0/0:36,0:23:10.26:0,10,177	1/1:13,9:22:39.07:432,39,0	0/0:10,0:10:15:0,15,181	0/0:21,0:23:57.01:0,57,811	1/1:5,22:27:65.95:696,66,0	1/1:2,4:6:18.05:200,18,0	0/0:18,0:18:48.16:0,48,742	0/0:16,0:16:37.29:0,37,503	0/0:9,0:9:18.06:0,18,265	1/1:1,6:7:21.06:233,21,0	1/1:2,4:6:15.04:166,15,0	1/1:2,6:8:21.05:234,21,0	1/1:3,6:9:21.05:233,21,0	1/1:12,13:25:66.13:709,66,0	0/0:20,0:18:42.09:0,42,609	1/1:13,8:16:27.06:298,27,0	1/1:5,13:17:30.55:362,31,0	1/1:4,7:9:21.05:233,21,0	1/1:2,3:4:6.01:65,6,0	0/0:15,0:15:39.07:0,39,535	0/0:9,0:11:30.09:0,30,423	1/1:7,6:13:30.06:324,30,0	0/1:3,8:11:17.54:269,0,18	1/1:5,11:15:45.12:499,45,0	1/1:2,6:8:15.04:166,15,0
chr10	38662075	.	T	TG	693.88	PASS	AB=0.878;AC=14;AF=0.250;AN=56;BaseQRankSum=-4.545;DP=452;FS=0.000;HRun=0;HaplotypeScore=78.8916;InbreedingCoeff=-0.1998;MQ=57.73;MQ0=9;MQRankSum=0.937;QD=3.90;ReadPosRankSum=-4.960;VQSLOD=2.0674;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:63.07:0,63,883	0/0:2,0:2:2.60:0,3,10	0/0:33,0:13:13.59:0,14,228	0/0:49,0:21:24.17:0,24,235	0/1:14,5:19:97.13:97,0,125	0/0:10,0:10:24:0,24,245	0/0:21,0:21:44.72:0,45,676	0/1:26,1:27:99:183,0,136	0/1:4,2:6:23.82:24,0,24	0/0:19,0:19:54.17:0,54,723	0/0:17,0:17:40.29:0,40,486	0/0:9,0:8:21.06:0,21,273	0/1:6,1:7:14.22:14,0,41	0/1:5,0:5:19.51:20,0,26	0/0:6,1:7:11.12:0,11,53	0/0:9,0:9:21.18:0,21,96	0/1:24,4:28:99:170,0,151	0/0:22,0:20:48.08:0,48,592	0/1:16,2:13:47.20:76,0,47	0/0:15,0:14:1.89:0,2,98	0/1:13,2:13:8.22:8,0,88	1/1:4,1:4:0.86:29,1,0	0/0:16,0:16:42.03:0,42,503	0/0:12,0:12:10.77:0,11,312	0/1:9,3:12:64.05:64,0,73	0/1:11,1:12:35.37:35,0,100	0/1:12,5:16:87.60:88,0,88	0/1:7,0:7:5.62:35,0,6
chr10	38662108	.	GTT	G	4315.20	PASS	AB=0.661;AC=36;AF=0.667;AN=54;BaseQRankSum=-3.444;DP=513;FS=0.996;HRun=11;HaplotypeScore=84.6124;InbreedingCoeff=0.5814;MQ=65.01;MQ0=16;MQRankSum=-3.783;QD=13.49;ReadPosRankSum=1.677;VQSLOD=3.3653;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:26:43.37:0,43,170	1/1:0,1:1:3.01:32,3,0	0/0:81,0:24:37.87:0,38,436	0/1:88,0:26:36.38:36,0,130	1/1:4,10:13:27.02:277,27,0	0/1:0,2:5:10.55:51,0,11	0/0:7,0:21:11.52:0,12,91	1/1:9,13:22:45.10:478,45,0	1/1:2,6:8:18.04:192,18,0	0/0:3,0:23:47.51:0,48,174	0/1:4,1:14:10.59:11,0,87	0/0:2,0:10:10.21:0,10,50	1/1:1,8:9:17.97:191,18,0	1/1:1,8:9:21.05:223,21,0	1/1:1,10:11:24.06:255,24,0	1/1:0,9:9:21.05:223,21,0	1/1:4,24:28:63.13:669,63,0	0/1:4,2:14:13.91:14,0,33	1/1:8,11:17:33.03:335,33,0	1/1:5,5:9:11.99:128,12,0	1/1:5,10:16:23.73:282,24,0	1/1:0,4:3:6.02:64,6,0	0/0:2,0:14:19.02:0,19,68	0/0:7,0:14:2.62:0,3,89	1/1:0,6:6:15.04:160,15,0	1/1:3,6:10:11.96:183,12,0	1/1:1,17:18:48.12:511,48,0	./.
chr10	38663221	.	AG	A	13138.28	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=8.492;DP=597;FS=7.494;HRun=1;HaplotypeScore=66.2719;InbreedingCoeff=0.9689;MQ=80.08;MQ0=0;MQRankSum=-1.447;QD=39.34;ReadPosRankSum=3.587;VQSLOD=5.4458;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,120,1878	1/1:1,6:7:21.04:271,21,0	0/0:13,1:14:1.78:0,2,517	0/0:19,0:17:35.53:0,36,447	1/1:1,9:10:30.06:395,30,0	0/0:29,0:29:87.28:0,87,1365	0/0:24,0:24:72.23:0,72,1124	1/1:0,26:26:72.23:972,72,0	1/1:2,23:25:75.21:1027,75,0	0/0:26,0:26:78.25:0,78,1178	0/0:11,0:11:33.11:0,33,525	0/0:22,0:22:60.12:0,60,928	1/1:0,21:21:57.19:795,57,0	1/1:1,14:15:45.11:607,45,0	1/1:2,35:37:99:1433,108,0	1/1:0,22:22:63.21:881,63,0	1/1:1,33:34:96.32:1337,96,0	0/0:28,1:29:46.19:0,46,1282	1/1:0,23:23:66.22:923,66,0	1/1:0,12:12:36.12:501,36,0	1/1:1,26:27:78.21:1053,78,0	1/1:1,11:12:33.11:461,33,0	0/0:15,0:15:42.12:0,42,624	0/0:34,0:34:99:0,102,1607	1/1:1,12:13:39.13:545,39,0	1/1:1,21:22:66.21:905,66,0	1/1:0,19:19:54.15:733,54,0	1/1:2,7:9:23.97:299,24,0
chr10	38663296	.	GA	G	7649.14	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=5.313;DP=572;FS=2.845;HRun=10;HaplotypeScore=66.1528;InbreedingCoeff=0.9964;MQ=63.71;MQ0=0;MQRankSum=-0.355;QD=23.11;ReadPosRankSum=1.383;VQSLOD=5.8408;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:81.94:0,82,867	1/1:0,11:11:32.99:286,33,0	0/0:10,0:8:21.04:0,21,218	0/0:11,0:9:20.39:0,20,194	1/1:0,20:20:44.99:390,45,0	0/0:22,0:22:54.12:0,54,580	0/0:24,0:24:63.17:0,63,694	1/1:3,15:18:38.96:334,39,0	1/1:1,25:26:71.98:624,72,0	0/0:32,0:32:72.19:0,72,791	0/0:23,0:23:57.15:0,57,631	0/0:13,0:13:36.08:0,36,389	1/1:2,10:12:29.98:260,30,0	1/1:1,20:21:56.99:495,57,0	1/1:7,26:34:95:807,95,0	1/1:0,12:12:35.99:312,36,0	1/1:2,21:23:62.99:546,63,0	0/0:21,1:22:19.06:0,19,431	1/1:5,14:20:47:394,47,0	1/1:3,10:13:32.99:286,33,0	1/1:3,17:20:53.97:469,54,0	1/1:0,23:23:65.98:573,66,0	0/0:21,0:21:54.13:0,54,586	0/0:32,0:32:90.21:0,90,978	1/1:1,14:15:38.99:339,39,0	1/1:0,26:26:77.98:676,78,0	1/1:3,28:31:80.98:703,81,0	1/1:0,6:6:18:156,18,0
chr10	38663650	.	A	AACAC	3855.96	PASS	AB=0.920;AC=40;AF=0.714;AN=56;BaseQRankSum=8.549;DP=674;FS=10.375;HRun=0;HaplotypeScore=171.6886;InbreedingCoeff=0.5420;MQ=58.98;MQ0=10;MQRankSum=-7.759;QD=7.79;ReadPosRankSum=-5.280;VQSLOD=-0.1393;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:50:96.28:0,96,1463	1/1:5,1:7:3.01:52,3,0	0/1:41,0:18:6.97:7,0,134	0/1:52,0:22:24.12:24,0,94	1/1:16,1:17:5.98:48,6,0	0/0:19,0:22:39.12:0,39,590	0/0:25,0:29:45.09:0,45,630	1/1:23,0:21:29.22:256,29,0	1/1:8,2:13:15.04:271,15,0	0/0:34,0:34:68.99:0,69,994	0/0:14,0:18:34.34:0,34,479	1/1:12,0:27:8.01:124,8,0	1/1:15,0:16:13.67:130,14,0	1/1:18,1:21:12.44:152,12,0	1/1:19,1:21:11.68:202,12,0	1/1:23,2:25:29.27:444,29,0	1/1:13,4:18:7.27:108,7,0	0/0:26,0:26:48.15:0,48,758	1/1:20,1:20:19.30:230,19,0	1/1:12,3:15:15.03:227,15,0	0/1:29,0:29:22.07:117,0,22	1/1:24,1:25:18.65:250,19,0	1/1:13,0:22:5.61:104,6,0	1/1:18,0:35:12.51:210,13,0	1/1:11,1:13:3.47:27,3,0	0/1:11,0:19:18.82:408,0,19	1/1:20,0:21:22.74:307,23,0	1/1:7,1:9:9.03:158,9,0
chr10	38663732	.	AG	A	11172.41	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=16.803;DP=628;FS=13.977;HRun=3;HaplotypeScore=139.5938;InbreedingCoeff=0.9747;MQ=95.91;MQ0=0;MQRankSum=-3.627;QD=34.48;ReadPosRankSum=1.280;VQSLOD=2.7889;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,129,1856	1/1:0,1:1:3.01:37,3,0	0/0:38,0:37:93.68:0,94,1267	0/0:26,0:26:53.22:0,53,859	1/1:0,23:23:63.15:764,63,0	0/0:23,0:23:66.21:0,66,931	0/0:32,0:32:96.30:0,96,1346	1/1:2,28:30:84.23:1005,84,0	1/1:1,16:17:51.16:631,51,0	0/0:23,0:23:63.21:0,63,892	0/0:19,0:19:57.19:0,57,818	0/0:24,0:24:69.23:0,69,993	1/1:2,19:21:63.20:777,63,0	1/1:0,15:15:45.10:540,45,0	1/1:1,13:14:39.06:464,39,0	1/1:5,21:26:69.03:787,69,0	1/1:0,14:14:42.13:520,42,0	0/0:18,0:18:51.13:0,51,711	1/1:1,10:11:33.05:381,33,0	1/1:3,15:18:48.15:595,48,0	1/1:4,34:38:99:1349,111,0	1/1:1,17:18:54.17:669,54,0	0/0:28,0:28:78.26:0,78,1119	0/0:30,0:30:72.11:0,72,985	1/1:1,16:17:48.10:566,48,0	1/1:2,22:24:29.01:811,29,0	1/1:3,26:29:84.18:996,84,0	1/1:1,7:8:24.03:280,24,0
chr10	38663825	.	CG	C	18435.37	PASS	AB=0.542;AC=39;AF=0.696;AN=56;BaseQRankSum=16.707;DP=751;FS=6.634;HRun=2;HaplotypeScore=130.5615;InbreedingCoeff=0.9151;MQ=76.08;MQ0=0;MQRankSum=-4.768;QD=35.05;ReadPosRankSum=3.062;VQSLOD=4.0519;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,123,1819	1/1:0,10:10:30.10:389,30,0	0/0:20,0:20:42.35:0,42,699	0/0:19,0:18:39.88:0,40,552	1/1:3,14:17:42.14:542,42,0	0/0:28,0:28:81.27:0,81,1210	0/0:43,0:43:99:0,129,1892	1/1:2,26:28:72.22:916,72,0	1/1:5,25:30:78.25:1010,78,0	0/0:43,0:43:99:0,126,1886	0/0:13,0:13:39.12:0,39,564	1/1:1,36:37:99:1322,102,0	1/1:3,17:20:57.18:734,57,0	1/1:0,36:36:99:1321,102,0	1/1:0,23:23:54.15:701,54,0	1/1:0,27:27:78.25:1011,78,0	1/1:0,18:18:48.16:623,48,0	0/0:17,0:17:45.15:0,45,674	1/1:0,25:25:69.22:888,69,0	1/1:1,26:27:75.23:956,75,0	1/1:1,76:77:99:2998,232,0	1/1:2,28:30:78.25:1011,78,0	1/1:0,16:16:48.16:623,48,0	1/1:1,23:24:48.16:622,48,0	1/1:1,24:25:69.22:896,69,0	0/1:4,22:26:61.78:744,0,62	1/1:1,21:22:63.20:817,63,0	1/1:0,8:8:24.08:311,24,0
chr10	38664468	.	C	CAACT	27616.37	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-13.669;DP=790;FS=5.119;HRun=0;HaplotypeScore=126.0181;InbreedingCoeff=0.9589;MQ=85.90;MQ0=0;MQRankSum=-11.939;QD=58.39;ReadPosRankSum=0.495;VQSLOD=6.5540;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:56:99:0,154,2849	1/1:1,3:4:12.04:236,12,0	0/0:23,0:23:45.19:0,45,930	0/0:32,0:32:77.25:0,77,1269	1/1:3,11:14:21.07:475,21,0	0/0:17,0:17:48.16:0,48,883	0/0:44,0:44:99:0,123,2252	1/1:6,11:19:45.14:1059,45,0	1/1:3,27:33:68.42:1639,68,0	0/0:24,0:24:63.21:0,63,1146	0/0:12,0:12:30.05:0,30,517	0/0:27,0:27:69.23:0,69,1250	1/1:1,31:35:89.90:2312,90,0	1/1:2,20:23:54.18:1352,54,0	1/1:2,31:34:84.29:2132,84,0	1/1:2,26:28:69.24:1713,69,0	1/1:3,37:42:99:2714,102,0	0/0:28,1:29:1.41:0,1,1333	1/1:7,17:26:70.11:1618,70,0	1/1:3,20:24:63.17:1347,63,0	1/1:7,67:75:99:4084,168,0	1/1:3,25:28:75.16:1660,75,0	0/0:16,0:16:45.14:0,45,808	0/0:37,0:37:99:0,102,1868	1/1:1,21:21:51.02:1037,51,0	1/1:6,31:39:81.32:2526,81,0	1/1:2,20:23:54.18:1393,54,0	1/1:0,4:4:12.04:320,12,0
chr10	38664749	.	TA	T	7060.82	PASS	AB=1.000;AC=35;AF=0.625;AN=56;BaseQRankSum=14.593;DP=527;FS=6.476;HRun=10;HaplotypeScore=73.6611;InbreedingCoeff=0.8902;MQ=71.09;MQ0=1;MQRankSum=0.200;QD=20.53;ReadPosRankSum=-0.275;VQSLOD=5.5853;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:69.16:0,69,745	1/1:2,6:8:14.99:130,15,0	0/1:14,0:11:15.42:15,0,124	0/0:11,0:10:3.13:0,3,29	1/1:1,30:31:80.86:693,81,0	0/0:20,0:20:45.12:0,45,498	0/0:15,0:15:39.11:0,39,431	1/1:4,27:31:80.95:697,81,0	1/1:3,14:17:35.99:312,36,0	0/0:34,1:36:70.04:0,70,984	0/0:16,0:16:39.11:0,39,431	0/0:14,0:14:36.08:0,36,389	1/1:3,11:14:29.59:260,30,0	1/1:2,11:13:23.99:208,24,0	1/1:3,16:19:26.55:385,27,0	1/1:1,14:15:41.98:365,42,0	1/1:2,18:20:50.99:443,51,0	0/0:14,1:15:13.01:0,13,359	1/1:4,27:31:77.95:675,78,0	1/1:2,31:33:89.90:772,90,0	1/1:2,6:8:15:130,15,0	1/1:6,10:16:29.99:260,30,0	0/0:21,0:21:57.13:0,57,614	0/0:9,0:9:21.06:0,21,232	1/1:0,15:15:41.99:365,42,0	1/1:4,22:26:65.95:568,66,0	1/1:1,25:26:68.98:599,69,0	1/1:0,7:7:21:182,21,0
chr10	38664940	.	TTAAA	T	4018.47	PASS	AB=0.989;AC=26;AF=0.464;AN=56;BaseQRankSum=15.638;DP=501;FS=3.102;HRun=0;HaplotypeScore=124.7667;InbreedingCoeff=0.0308;MQ=70.12;MQ0=3;MQRankSum=-3.919;QD=11.19;ReadPosRankSum=9.928;VQSLOD=2.0196;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:51.10:0,51,1059	0/1:11,0:11:5.56:97,0,6	0/0:15,0:12:23.17:0,23,335	0/0:11,0:11:22.68:0,23,243	0/1:26,2:28:33.16:378,0,33	0/0:19,0:19:57.15:0,57,1313	0/0:12,0:12:34.67:0,35,864	0/1:19,0:19:99:162,0,164	0/1:19,0:19:0.81:208,0,1	0/0:32,0:32:96.23:0,96,1756	0/0:16,0:16:48.12:0,48,852	1/1:15,0:15:13.21:204,13,0	0/1:18,1:19:33.72:242,0,34	1/1:16,0:16:31.93:192,32,0	1/1:25,0:25:11.36:311,11,0	1/1:22,0:21:8.88:260,9,0	0/1:21,0:21:76.78:147,0,77	0/0:19,0:19:54.92:0,55,1240	0/1:12,0:12:21.36:162,0,21	0/1:22,0:22:60.50:213,0,61	0/1:12,0:12:19.90:106,0,20	0/1:13,0:13:9.08:130,0,9	0/1:22,1:23:39.43:300,0,39	1/1:8,0:8:8.49:97,8,0	1/1:17,0:17:42.26:237,42,0	0/1:17,0:17:30.07:216,0,30	0/1:34,0:34:19.06:339,0,19	0/1:6,0:6:16.13:16,0,87
chr10	38664941	.	TAAAA	T	10512.19	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=9.238;DP=506;FS=17.613;HRun=14;HaplotypeScore=105.0429;InbreedingCoeff=0.9378;MQ=70.02;MQ0=3;MQRankSum=-3.410;QD=29.78;ReadPosRankSum=7.050;VQSLOD=1.8412;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:45.15:0,45,930	1/1:1,10:11:4.24:250,4,0	0/0:15,0:12:12.04:0,12,191	0/0:10,0:11:16.81:0,17,182	1/1:5,23:28:45.40:828,45,0	0/0:18,0:20:51.17:0,51,1100	0/0:11,0:15:44.36:0,44,852	1/1:7,10:19:32.54:430,33,0	1/1:2,17:19:39.10:552,39,0	0/0:34,0:37:78.74:0,79,1535	0/0:15,0:17:45.07:0,45,881	1/1:1,14:15:36.10:503,36,0	1/1:3,14:18:43.35:591,43,0	1/1:0,15:15:33.11:467,33,0	1/1:2,23:25:60.16:849,60,0	1/1:1,20:21:53.79:753,54,0	1/1:5,15:20:33.01:467,33,0	0/0:19,0:20:49.41:0,49,1035	1/1:2,10:12:30.06:413,30,0	1/1:4,18:22:44.95:602,45,0	1/1:1,10:11:19.01:279,19,0	1/1:1,12:13:30.04:411,30,0	1/1:4,18:23:49.70:693,50,0	1/1:0,8:8:18.03:255,18,0	1/1:0,16:17:45.13:605,45,0	1/1:1,14:17:7.94:529,8,0	1/1:4,29:34:69.10:951,69,0	1/1:3,2:5:5.98:85,6,0
chr10	38665446	.	CG	C	14746.81	PASS	AB=1.000;AC=41;AF=0.732;AN=56;BaseQRankSum=10.193;DP=543;FS=2.556;HRun=1;HaplotypeScore=54.6823;InbreedingCoeff=0.9450;MQ=60.57;MQ0=2;MQRankSum=0.354;QD=37.81;ReadPosRankSum=1.848;VQSLOD=5.3046;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:93.26:0,93,1455	1/1:0,7:7:18.06:252,18,0	0/1:8,0:5:1.08:1,0,100	0/0:13,0:12:25.90:0,26,391	1/1:0,18:18:48.16:671,48,0	0/0:20,0:20:57.18:0,57,886	0/0:29,0:29:87.28:0,87,1363	1/1:0,26:26:78.25:1073,78,0	1/1:0,15:15:33.11:460,33,0	0/0:20,0:20:60.20:0,60,958	0/0:14,0:14:42.10:0,42,639	1/1:1,14:15:45.11:607,45,0	1/1:0,22:22:66.22:923,66,0	1/1:0,20:20:57.19:796,57,0	1/1:0,20:20:57.19:797,57,0	1/1:0,15:15:36.12:503,36,0	1/1:0,39:39:99:1510,108,0	0/0:25,0:25:69.19:0,69,1074	1/1:1,13:13:33.11:448,33,0	1/1:0,6:6:18.06:251,18,0	1/1:0,46:46:99:1762,126,0	1/1:0,15:15:42.14:587,42,0	1/1:0,16:16:42.14:587,42,0	1/1:0,30:30:87.29:1216,87,0	1/1:0,9:9:24.08:336,24,0	1/1:0,26:26:78.26:1089,78,0	1/1:0,17:17:45.15:626,45,0	1/1:0,6:6:18.06:252,18,0
chr10	38666309	.	TG	T	14201.42	PASS	AB=0.727;AC=34;AF=0.607;AN=56;BaseQRankSum=15.603;DP=660;FS=2.430;HRun=1;HaplotypeScore=63.8706;InbreedingCoeff=0.8747;MQ=80.36;MQ0=0;MQRankSum=-1.897;QD=36.60;ReadPosRankSum=2.901;VQSLOD=5.3253;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,144,2225	1/1:0,7:7:21.07:294,21,0	0/0:19,0:20:48.01:0,48,701	0/1:12,1:13:3.07:3,0,417	1/1:0,26:26:75.25:1043,75,0	0/0:24,0:24:72.25:0,72,1149	0/0:27,0:27:81.19:0,81,1239	1/1:0,30:30:90.29:1242,90,0	1/1:0,34:34:99:1427,102,0	0/0:27,0:27:81.27:0,81,1276	0/0:25,0:25:75.22:0,75,1152	0/0:27,0:27:81.26:0,81,1272	1/1:0,26:26:63.21:881,63,0	1/1:0,15:15:39.10:524,39,0	1/1:0,28:28:75.25:1049,75,0	1/1:0,14:14:42.14:587,42,0	1/1:0,19:19:48.16:671,48,0	0/0:28,0:28:84.29:0,84,1337	1/1:0,13:13:39.13:545,39,0	1/1:1,36:37:99:1407,102,0	1/1:0,18:18:51.17:713,51,0	1/1:0,19:19:51.17:713,51,0	0/0:18,0:18:48.16:0,48,766	0/0:28,0:28:84.24:0,84,1302	1/1:0,21:21:51.17:713,51,0	0/1:3,29:31:53.63:1027,0,54	1/1:0,28:28:75.21:1027,75,0	1/1:0,8:8:24.08:336,24,0
chr10	38666569	.	C	CACACACACACACAA	7584.45	PASS	AB=1.000;AC=30;AF=0.536;AN=56;BaseQRankSum=12.583;DP=642;FS=0.357;HRun=0;HaplotypeScore=280.7103;InbreedingCoeff=0.2513;MQ=60.15;MQ0=6;MQRankSum=-15.206;QD=18.68;ReadPosRankSum=4.489;VQSLOD=3.0878;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,126,3704	1/1:9,0:9:13.64:82,14,0	0/0:39,0:22:53.36:0,53,1299	0/0:38,0:28:51.81:0,52,1023	0/1:26,0:26:10.73:278,0,11	0/0:21,0:21:57.13:0,57,1732	0/0:25,0:25:69.05:0,69,1736	0/1:31,0:31:99:597,0,228	0/1:17,0:17:38.69:220,0,39	0/0:28,0:28:72.18:0,72,2229	0/0:20,0:20:54.12:0,54,1651	1/1:12,0:25:45.63:2536,46,0	0/1:15,0:15:6.26:90,0,6	0/1:22,0:22:69.61:109,0,70	1/1:22,0:22:34.67:147,35,0	0/1:14,0:14:6.69:63,0,7	1/1:19,0:19:28.41:268,28,0	0/0:17,0:17:48.05:0,48,1609	0/1:27,0:27:99:453,0,217	1/1:27,0:27:14.46:105,14,0	1/1:20,0:20:11.22:62,11,0	1/1:17,0:17:0.43:192,0,0	1/1:10,2:25:27.01:1193,27,0	1/1:3,4:11:8.98:413,9,0	0/1:19,0:19:12.31:96,0,12	0/1:26,0:26:65.50:413,0,65	0/1:26,0:26:94.52:189,0,95	1/1:7,0:7:5.69:80,6,0
chr10	38666575	.	C	CACACAT	16399.99	PASS	AB=1.000;AC=38;AF=0.679;AN=56;BaseQRankSum=-1.771;DP=600;FS=1.604;HRun=0;HaplotypeScore=128.5044;InbreedingCoeff=0.7642;MQ=66.98;MQ0=3;MQRankSum=-10.076;QD=44.20;ReadPosRankSum=3.323;VQSLOD=5.0124;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,135,2591	1/1:0,7:7:18.02:576,18,0	0/0:34,0:22:20.46:0,20,897	0/0:34,0:25:54.08:0,54,757	1/1:1,21:25:18.06:586,18,0	0/0:19,0:19:57.10:0,57,1144	0/0:26,0:26:75.04:0,75,1249	1/1:1,2:25:74.87:945,75,0	1/1:0,12:19:30.10:919,30,0	0/0:25,0:25:72.10:0,72,1482	0/0:21,0:21:62.93:0,63,1131	1/1:15,0:15:0.10:412,0,0	1/1:0,14:15:24.08:821,24,0	1/1:0,17:21:32.78:1061,33,0	1/1:0,17:19:39.13:1442,39,0	1/1:0,13:14:24.08:826,24,0	1/1:1,11:15:18.06:640,18,0	0/0:17,0:17:50.98:0,51,1002	1/1:0,24:29:86.85:1416,87,0	1/1:1,18:25:36.06:1239,36,0	1/1:0,15:18:9.03:332,9,0	1/1:0,12:15:27.09:933,27,0	0/1:18,0:19:48.72:204,0,49	0/1:8,0:8:12.42:56,0,12	1/1:0,14:18:24.08:809,24,0	1/1:0,18:27:74.79:1662,75,0	1/1:0,17:25:44.89:1410,45,0	1/1:0,8:12:3.01:111,3,0
chr10	38667366	.	TACAGA	T	1874.06	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.743;DP=592;FS=1.277;HRun=0;HaplotypeScore=141.8784;InbreedingCoeff=0.9960;MQ=70.41;MQ0=1;MQRankSum=-9.685;QD=39.87;ReadPosRankSum=1.195;VQSLOD=3.7415;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,163,5322	0/0:6,0:6:18.06:0,18,599	0/0:17,0:16:44.97:0,45,1115	0/0:16,0:14:34.70:0,35,774	0/0:20,0:20:57.20:0,57,1855	0/0:20,0:20:60.21:0,60,1999	0/0:29,0:29:87.26:0,87,2754	0/0:34,0:34:99:0,102,3180	0/0:24,0:24:72.25:0,72,2347	0/0:19,0:19:51.18:0,51,1684	0/0:23,0:23:69.23:0,69,2165	1/1:1,18:19:57.18:947,57,0	0/0:20,0:20:60.21:0,60,1995	0/0:16,0:16:48.16:0,48,1545	0/0:37,0:37:99:0,109,3593	0/0:15,0:15:45.14:0,45,1424	0/0:12,0:12:36.12:0,36,1208	0/0:16,0:16:45.15:0,45,1479	0/0:26,0:25:75.25:0,75,2296	0/0:16,0:16:45.07:0,45,1440	0/0:38,0:38:99:0,114,3634	0/0:18,0:18:51.16:0,51,1532	1/1:0,13:16:36.15:581,36,0	1/1:1,11:12:30.10:489,30,0	0/0:8,0:8:24.08:0,24,795	0/0:23,0:23:69.24:0,69,2181	0/0:16,0:16:48.16:0,48,1599	0/0:22,0:22:66.23:0,66,2193
chr10	38667373	.	G	GA	1191.82	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=10.491;DP=612;FS=0.000;HRun=1;HaplotypeScore=98.8411;InbreedingCoeff=0.9990;MQ=71.36;MQ0=1;MQRankSum=-10.331;QD=20.91;ReadPosRankSum=-0.063;VQSLOD=3.5163;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:56:99:0,165,2080	0/0:9,0:9:27.07:0,27,332	0/0:17,0:16:42.13:0,42,518	0/0:22,0:21:30.37:0,30,450	0/0:21,0:21:57.14:0,57,721	0/0:21,0:21:63.20:0,63,818	0/0:29,0:29:87.27:0,87,1115	0/0:31,0:31:93.20:0,93,1110	0/0:23,0:23:69.22:0,69,895	0/0:19,0:19:54.14:0,54,673	0/0:21,0:21:59.21:0,59,730	1/1:3,18:21:62.99:570,63,0	0/0:19,0:19:57.19:0,57,739	0/0:16,0:16:48.13:0,48,593	0/0:38,0:38:99:0,108,1399	0/0:16,0:16:48.16:0,48,622	0/0:16,0:16:48.14:0,48,609	0/0:15,0:15:45.15:0,45,584	0/0:25,0:24:69.14:0,69,848	0/0:16,0:16:45.13:0,45,565	0/0:37,0:37:99:0,105,1347	0/0:14,0:14:39.13:0,39,506	1/1:8,12:20:44.31:394,44,0	1/1:5,11:16:41.92:370,42,0	0/0:9,0:9:27.08:0,27,337	0/0:26,0:26:69.22:0,69,895	0/0:16,0:16:48.16:0,48,623	0/0:22,0:22:63.20:0,63,814
chr10	38667724	.	CACACACAG	C	1448.38	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=4.362;DP=574;FS=10.511;HRun=0;HaplotypeScore=168.5356;InbreedingCoeff=0.8911;MQ=52.56;MQ0=13;MQRankSum=-3.036;QD=26.82;ReadPosRankSum=-0.196;VQSLOD=2.7289;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:76.59:0,77,2800	0/0:9,0:9:12.96:0,13,221	0/0:25,0:9:17.12:0,17,181	0/0:37,0:14:24.74:0,25,290	0/0:19,0:19:2.65:0,3,390	0/0:12,0:12:27.06:0,27,794	0/0:29,0:29:77.81:0,78,1852	0/0:31,0:28:73.64:0,74,949	0/0:16,0:16:21.03:0,21,544	0/0:15,0:14:42.08:0,42,888	0/0:22,0:22:60.03:0,60,1639	1/1:16,6:22:42.02:718,42,0	0/0:13,0:11:8.79:0,9,357	0/0:16,0:15:11.94:0,12,167	0/0:16,0:16:20.62:0,21,259	0/0:14,0:14:26.71:0,27,477	0/0:27,0:27:62.68:0,63,1382	0/0:17,0:17:48:0,48,1069	0/0:17,0:15:33.03:0,33,529	0/0:15,0:15:26.70:0,27,303	0/0:43,0:42:30.89:0,31,813	0/0:15,0:15:20.90:0,21,380	1/1:14,3:17:27.07:520,27,0	1/1:14,1:15:26.55:352,27,0	0/0:18,0:18:36.02:0,36,432	0/0:24,0:24:65.18:0,65,1760	0/0:18,0:16:38.57:0,39,485	0/0:14,0:14:33.55:0,34,618
chr10	38667802	.	A	AT	1564.77	PASS	AB=0.938;AC=7;AF=0.125;AN=56;BaseQRankSum=9.535;DP=581;FS=1.164;HRun=5;HaplotypeScore=82.3388;InbreedingCoeff=0.8713;MQ=74.35;MQ0=0;MQRankSum=-2.226;QD=21.44;ReadPosRankSum=-0.301;VQSLOD=2.6961;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,123,1314	0/0:7,0:7:18.04:0,18,192	0/0:24,0:24:36.59:0,37,503	0/1:14,1:15:4.61:5,0,287	0/0:14,0:14:39.10:0,39,419	0/0:22,0:22:66.17:0,66,709	0/0:23,0:23:60.15:0,60,645	0/0:28,0:28:63.14:0,63,669	0/0:17,0:17:48.12:0,48,516	0/0:33,0:33:95.60:0,96,1007	0/0:12,0:12:36.07:0,36,371	1/1:6,15:21:48.09:563,48,0	0/0:13,0:13:33.08:0,33,354	0/0:22,0:22:60.15:0,60,643	0/0:23,0:23:60.11:0,60,633	0/0:13,0:13:32.67:0,33,332	0/0:31,0:31:78.20:0,78,837	0/0:20,0:20:53.46:0,53,579	0/0:17,0:17:45.09:0,45,474	0/0:19,0:19:54.13:0,54,577	0/0:27,0:27:66.17:0,66,709	0/0:17,0:17:45.11:0,45,483	1/1:3,21:24:63.19:770,63,0	1/1:2,11:13:30.09:372,30,0	0/0:21,0:21:48.12:0,48,515	0/0:28,0:28:78.18:0,78,831	0/0:25,0:25:63.08:0,63,672	0/0:8,0:8:24.06:0,24,258
chr10	38667873	.	A	ACCAGAG	27973.13	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-6.010;DP=556;FS=14.464;HRun=0;HaplotypeScore=115.1946;InbreedingCoeff=0.9767;MQ=75.06;MQ0=0;MQRankSum=-16.752;QD=76.43;ReadPosRankSum=1.115;VQSLOD=4.8702;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,99,2249	1/1:1,7:8:21.07:739,21,0	0/0:21,0:21:48.14:0,48,990	0/0:21,0:21:48.15:0,48,1046	1/1:5,12:19:15.05:527,15,0	0/0:25,0:25:69.24:0,69,1608	0/0:33,0:33:90.31:0,90,2066	1/1:15,13:30:84.26:2648,84,0	1/1:3,15:19:51.18:1743,51,0	0/0:22,0:22:57.18:0,57,1245	0/0:16,0:16:48.16:0,48,1068	1/1:5,19:26:72.25:2455,72,0	1/1:6,8:15:33.11:1117,33,0	1/1:5,21:28:75.26:2636,75,0	1/1:3,18:22:57.20:2006,57,0	1/1:1,12:14:33.11:1162,33,0	1/1:11,18:31:66.41:2286,66,0	0/0:17,0:17:42.14:0,42,957	1/1:4,4:9:24.08:825,24,0	1/1:4,13:18:30.10:990,30,0	1/1:7,10:19:35.36:1264,35,0	1/1:6,10:16:27.09:948,27,0	1/1:9,12:21:36.11:1071,36,0	1/1:3,9:13:14.77:527,15,0	1/1:1,13:15:33.11:1022,33,0	1/1:5,21:26:8.24:2429,8,0	1/1:1,12:13:32.98:1161,33,0	1/1:1,3:4:12.04:416,12,0
chr10	38668008	.	CA	C	3091.08	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=13.082;DP=722;FS=1.348;HRun=3;HaplotypeScore=82.4349;InbreedingCoeff=0.9970;MQ=65.94;MQ0=0;MQRankSum=-0.343;QD=32.88;ReadPosRankSum=3.951;VQSLOD=4.0974;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,135,1944	0/0:6,0:6:18.06:0,18,258	0/0:34,0:34:82.04:0,82,1244	0/0:27,0:27:81.27:0,81,1138	0/0:13,0:13:33.10:0,33,454	0/0:25,0:25:60.19:0,60,839	0/0:47,0:47:99:0,132,1842	0/0:28,0:28:84.24:0,84,1161	0/0:26,0:26:78.26:0,78,1122	0/0:28,0:28:78.24:0,78,1091	0/0:15,0:15:45.15:0,45,642	1/1:0,38:38:99:1338,108,0	0/0:27,0:27:81.23:0,81,1141	0/0:32,0:32:93.27:0,93,1298	0/0:24,0:24:72.18:0,72,978	0/0:24,0:24:69.23:0,69,993	0/0:24,0:24:66.21:0,66,931	0/0:28,0:28:81.27:0,81,1165	0/0:15,0:15:42.14:0,42,605	0/0:18,0:18:51.16:0,51,709	0/0:39,0:39:99:0,111,1584	0/0:15,0:15:42.13:0,42,587	1/1:0,21:21:57.18:706,57,0	1/1:1,34:35:96.30:1190,96,0	0/0:13,0:13:36.10:0,36,498	0/0:30,0:30:81.27:0,81,1155	0/0:29,0:29:81.24:0,81,1126	0/0:16,0:16:48.16:0,48,691
chr10	38668287	.	C	CT	498.80	PASS	AB=1.000;AC=14;AF=0.250;AN=56;BaseQRankSum=3.354;DP=447;FS=1.377;HRun=10;HaplotypeScore=62.8504;InbreedingCoeff=0.6748;MQ=64.76;MQ0=10;MQRankSum=-0.773;QD=4.89;ReadPosRankSum=-2.962;VQSLOD=0.2457;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:31:71.03:0,71,545	1/1:3,0:3:9:79,9,0	0/0:16,0:10:14.60:0,15,89	0/1:14,0:11:7.90:18,0,8	1/1:18,0:18:24.28:181,24,0	0/0:12,0:12:32.79:0,33,257	0/0:20,0:20:47.91:0,48,391	0/0:23,0:22:27.03:0,27,200	0/0:15,0:14:5.05:0,5,105	0/0:14,0:14:26.44:0,26,200	0/0:10,0:11:28.95:0,29,217	0/0:20,0:19:7.06:0,7,43	0/1:18,0:17:3.67:81,0,4	1/1:13,1:15:9.82:70,10,0	1/1:3,4:7:5.96:51,6,0	1/1:10,0:10:15.07:98,15,0	1/1:16,1:17:12.81:97,13,0	0/0:33,0:34:70.13:0,70,519	0/0:24,0:23:34.66:0,35,252	0/0:8,0:8:5.29:0,5,41	0/0:17,0:17:7.44:0,7,62	0/0:13,0:12:8.72:0,9,56	0/0:14,0:12:14.60:0,15,48	0/0:28,0:30:45.62:0,46,140	0/0:7,0:6:4.56:0,5,17	0/0:12,0:12:7.42:0,7,59	0/0:16,0:15:12.70:0,13,78	0/0:5,0:5:6.54:0,7,51
chr10	38668296	.	TTC	T	1206.48	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=2.588;DP=418;FS=4.223;HRun=0;HaplotypeScore=53.1695;InbreedingCoeff=0.8205;MQ=56.23;MQ0=15;MQRankSum=2.366;QD=18.85;ReadPosRankSum=5.658;VQSLOD=3.3503;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:30:76.20:0,76,1167	0/0:3,0:3:8.95:0,9,71	0/0:14,0:7:15.01:0,15,168	0/0:16,0:7:13.38:0,13,123	0/0:15,0:15:24.31:0,24,196	0/0:13,0:13:35.11:0,35,549	0/0:20,0:19:54.14:0,54,929	0/0:25,0:23:40.96:0,41,447	0/0:14,0:14:35.57:0,36,309	0/0:15,0:14:39.02:0,39,511	0/0:12,0:11:32.36:0,32,448	1/1:2,11:13:7.05:285,7,0	0/0:17,0:16:24.61:0,25,186	0/0:14,0:14:17.97:0,18,166	0/0:5,0:5:6.01:0,6,66	0/0:9,0:9:17.99:0,18,174	0/0:20,0:20:12.01:0,12,119	0/0:32,0:32:81.74:0,82,1160	0/0:20,0:19:56.81:0,57,644	0/0:6,0:6:14.98:0,15,163	0/0:13,0:13:14.23:0,14,109	0/0:11,0:10:17.12:0,17,123	1/1:3,10:11:16.97:264,17,0	1/1:5,26:31:41.63:780,42,0	1/1:5,0:5:1.26:18,1,0	0/0:7,0:7:20.71:0,21,193	0/0:13,0:12:20.77:0,21,153	0/0:7,0:6:14.85:0,15,120
chr10	38669696	.	GGAGA	G	797.21	PASS	AB=1.000;AC=31;AF=0.674;AN=46;BaseQRankSum=6.549;DP=136;FS=0.000;HRun=0;HaplotypeScore=34.5525;InbreedingCoeff=0.6126;MQ=46.24;MQ0=9;MQRankSum=-5.081;QD=9.97;ReadPosRankSum=-1.855;VQSLOD=1.8550;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:13:32.09:0,32,273	./.	0/0:11,0:6:9.01:0,9,87	0/0:6,0:5:8.28:0,8,112	./.	0/0:2,0:2:5.99:0,6,50	0/0:10,0:9:20.98:0,21,177	1/1:1,10:10:27.15:178,27,0	1/1:6,0:6:14.81:98,15,0	0/0:4,0:4:12:0,12,109	./.	1/1:4,0:2:5.91:38,6,0	1/1:2,0:2:5.92:39,6,0	1/1:8,0:8:20.74:142,21,0	1/1:2,0:2:5.92:39,6,0	1/1:1,0:1:2.97:20,3,0	1/1:7,0:7:7.75:44,8,0	0/0:3,0:3:8.97:0,9,70	1/1:5,0:4:5.94:42,6,0	./.	1/1:6,0:5:5.97:46,6,0	1/1:4,0:4:2.95:19,3,0	1/1:2,0:2:2.96:19,3,0	0/1:6,0:6:7.92:35,0,8	1/1:5,0:5:2.95:19,3,0	1/1:4,0:4:8.91:66,9,0	1/1:7,0:7:17.75:118,18,0	./.
chr10	38670122	.	CACACTCACTCATTT	C	8011.79	PASS	AB=1.000;AC=28;AF=0.538;AN=52;BaseQRankSum=9.830;DP=444;FS=2.084;HRun=0;HaplotypeScore=148.3169;InbreedingCoeff=0.7158;MQ=68.10;MQ0=3;MQRankSum=-9.945;QD=37.09;ReadPosRankSum=-0.835;VQSLOD=4.0649;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,102,4684	1/1:10,0:10:0.06:365,0,0	0/0:30,0:23:65.79:0,66,2958	0/0:26,0:17:51.16:0,51,2109	./.	0/0:18,0:18:48.16:0,48,2254	0/0:14,0:14:42.13:0,42,1864	1/1:0,24:24:70.45:1818,70,0	0/1:18,0:18:14.96:179,0,15	0/0:19,0:19:57.20:0,57,2613	0/0:18,0:18:48.14:0,48,1843	0/0:7,0:7:21.07:0,21,729	0/1:13,0:12:3.05:427,0,3	1/1:16,0:15:18.02:295,18,0	1/1:17,0:17:3.01:94,3,0	1/1:15,0:15:12.51:288,13,0	1/1:17,0:16:5.91:306,6,0	0/0:14,0:14:41.51:0,42,1868	1/1:0,18:18:51.17:1403,51,0	1/1:0,9:9:3.01:37,3,0	1/1:9,0:9:6:67,6,0	./.	0/0:6,0:6:17.91:0,18,534	0/0:11,0:11:30.10:0,30,1050	1/1:14,0:13:3.01:76,3,0	1/1:0,17:17:45.78:1424,46,0	1/1:8,0:7:12.04:457,12,0	1/1:11,0:11:27.05:775,27,0
chr10	38670123	.	ACACTCACTCATTTTCTCTCT	A	7471.81	PASS	AC=30;AF=0.577;AN=52;BaseQRankSum=9.577;DP=438;FS=2.798;HRun=0;HaplotypeScore=187.3889;InbreedingCoeff=0.8653;MQ=68.25;MQ0=3;MQRankSum=-9.318;QD=34.75;ReadPosRankSum=-1.641;VQSLOD=4.0279;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,99,4070	1/1:10,0:10:18.06:503,18,0	0/0:30,0:23:56.30:0,56,2319	0/0:26,0:17:45.15:0,45,1587	./.	0/0:18,0:18:48.15:0,48,1935	0/0:13,0:13:39.13:0,39,1590	1/1:24,0:24:63.98:1349,64,0	1/1:2,16:18:6.02:260,6,0	0/0:19,0:19:57.19:0,57,2289	0/0:17,0:17:42.13:0,42,1452	0/0:7,0:7:21.05:0,21,651	1/1:13,0:12:21.06:638,21,0	1/1:16,0:15:18.06:471,18,0	1/1:0,17:17:3.01:171,3,0	1/1:15,0:15:15.04:381,15,0	1/1:17,0:16:23.98:472,24,0	0/0:14,0:14:41.51:0,42,1760	1/1:18,0:18:51.09:1038,51,0	1/1:9,0:9:2.94:18,3,0	1/1:8,0:8:2.98:21,3,0	./.	0/0:5,0:5:12.04:0,12,408	0/0:11,0:11:30.05:0,30,844	1/1:14,0:13:3.01:51,3,0	1/1:17,0:17:42.58:1121,43,0	1/1:8,0:7:12.04:378,12,0	1/1:11,0:11:24.04:600,24,0
chr10	38670124	.	CACTCACTCATTT	C	7194.52	PASS	AC=30;AF=0.577;AN=52;BaseQRankSum=9.632;DP=437;FS=2.785;HRun=0;HaplotypeScore=135.8184;InbreedingCoeff=0.8653;MQ=67.00;MQ0=3;MQRankSum=-9.895;QD=33.31;ReadPosRankSum=-1.479;VQSLOD=3.8725;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,99,3863	1/1:10,0:10:18.06:503,18,0	0/0:30,0:22:57.04:0,57,2320	0/0:23,0:15:45.15:0,45,1587	./.	0/0:18,0:18:48.15:0,48,1861	0/0:13,0:13:39.13:0,39,1515	1/1:24,0:24:64.34:1352,64,0	1/1:17,0:17:6.02:186,6,0	0/0:19,0:19:57.19:0,57,2133	0/0:17,0:17:44.80:0,45,1463	0/0:7,0:7:21.05:0,21,563	1/1:13,0:12:21.06:565,21,0	1/1:16,0:15:18.06:415,18,0	1/1:17,0:17:3.01:98,3,0	1/1:15,0:15:15.04:381,15,0	1/1:17,0:16:23.98:473,24,0	0/0:14,0:14:41.51:0,42,1517	1/1:19,0:19:46.80:1031,47,0	1/1:9,0:9:2.94:18,3,0	1/1:8,0:8:2.98:21,3,0	./.	0/0:5,0:5:12.04:0,12,408	0/0:11,0:11:30.05:0,30,797	1/1:14,0:13:3.01:51,3,0	1/1:17,0:17:43:1122,43,0	1/1:8,0:7:12.04:378,12,0	1/1:12,0:12:24.04:600,24,0
chr10	38670132	.	CATTT	C	3166.43	PASS	AC=24;AF=0.500;AN=48;BaseQRankSum=9.625;DP=412;FS=4.324;HRun=0;HaplotypeScore=96.1855;InbreedingCoeff=0.8830;MQ=65.04;MQ0=8;MQRankSum=-9.139;QD=18.30;ReadPosRankSum=1.015;VQSLOD=3.0145;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:34:96.26:0,96,2270	1/1:0,6:6:15.05:267,15,0	0/0:28,0:18:51.13:0,51,1163	0/0:21,0:12:33.11:0,33,750	./.	0/0:18,0:19:47.63:0,48,1071	0/0:15,0:15:41.17:0,41,926	1/1:25,0:24:41.59:581,42,0	1/1:16,1:17:6.01:82,6,0	0/0:17,0:17:51.17:0,51,1261	0/0:14,0:14:35.79:0,36,824	0/0:6,0:6:18.05:0,18,304	1/1:2,9:10:18.05:289,18,0	1/1:1,12:12:9.03:156,9,0	1/1:17,0:17:3:28,3,0	1/1:0,12:12:12.04:213,12,0	1/1:10,6:15:7.41:191,7,0	0/0:13,0:13:38.62:0,39,873	1/1:18,0:19:24.16:450,24,0	./.	./.	./.	0/0:4,0:4:12.04:0,12,242	0/0:8,0:8:21.07:0,21,433	0/0:2,12:13:0:0,0,0	1/1:18,0:17:30.79:563,31,0	1/1:1,8:7:12.04:222,12,0	1/1:0,10:10:18.06:317,18,0
chr10	38670198	.	CAG	C	175.86	PASS	AC=4;AF=0.074;AN=54;BaseQRankSum=5.454;DP=447;FS=16.961;HRun=0;HaplotypeScore=65.3530;InbreedingCoeff=0.9331;MQ=72.68;MQ0=19;MQRankSum=-2.757;QD=13.53;ReadPosRankSum=-1.687;VQSLOD=1.4107;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:83.40:0,83,1369	0/0:4,0:4:12.04:0,12,197	0/0:47,0:25:41.23:0,41,665	0/0:68,0:24:41.89:0,42,586	0/0:12,0:12:27.09:0,27,433	0/0:17,0:17:45.01:0,45,722	0/0:7,0:7:17.85:0,18,253	0/0:25,0:25:66.22:0,66,1120	0/0:18,0:18:45.11:0,45,652	0/0:19,0:18:51.15:0,51,867	0/0:6,0:6:18.06:0,18,295	1/1:0,4:4:11.99:126,12,0	0/0:13,0:13:36.09:0,36,540	0/0:15,0:15:36.58:0,37,552	0/0:12,0:12:36.09:0,36,570	0/0:11,0:11:26.83:0,27,450	0/0:19,0:19:46.70:0,47,635	0/0:13,0:13:36.11:0,36,544	0/0:11,0:10:30.10:0,30,489	0/0:11,0:11:30.10:0,30,500	0/0:16,0:15:18.06:0,18,281	0/0:11,0:11:33.11:0,33,544	./.	1/1:1,8:8:15.04:162,15,0	0/0:12,0:12:33.11:0,33,557	0/0:15,0:15:42.14:0,42,698	0/0:7,0:7:18.06:0,18,283	0/0:8,0:7:14.71:0,15,193
chr10	38671627	.	G	GA	803.54	PASS	AC=6;AF=0.111;AN=54;BaseQRankSum=6.146;DP=479;FS=0.747;HRun=7;HaplotypeScore=56.3388;InbreedingCoeff=0.8729;MQ=50.17;MQ0=30;MQRankSum=-1.428;QD=14.61;ReadPosRankSum=-0.730;VQSLOD=3.0688;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,114,1092	0/0:5,0:4:9.01:0,9,87	./.	0/0:20,0:5:4.82:0,5,33	0/0:11,0:8:12.02:0,12,116	0/0:19,0:15:36.06:0,36,348	0/0:18,0:18:45.07:0,45,434	0/0:23,0:21:47.09:0,47,435	0/0:13,0:12:21.03:0,21,202	0/0:15,0:13:33.05:0,33,318	0/0:25,0:23:30.02:0,30,290	1/1:5,6:11:23.99:257,24,0	0/0:10,0:10:24.04:0,24,231	0/0:9,0:8:11.16:0,11,114	0/0:12,0:12:20.99:0,21,189	0/0:3,0:3:6.01:0,6,58	0/0:27,0:27:60.03:0,60,563	0/0:24,0:24:54.05:0,54,514	0/0:21,0:17:42.07:0,42,405	0/0:17,0:16:32.94:0,33,318	0/0:9,0:9:24.04:0,24,232	0/0:12,0:12:18.03:0,18,173	1/1:13,9:21:23.92:256,24,0	1/1:7,14:21:36.11:431,36,0	0/0:16,0:14:30.03:0,30,283	0/0:17,0:17:39.01:0,39,367	0/0:22,0:21:41.97:0,42,388	0/0:11,0:9:20.98:0,21,191
chr10	38671640	.	G	GA	642.16	PASS	AB=0.944;AC=8;AF=0.143;AN=56;BaseQRankSum=4.893;DP=472;FS=0.000;HRun=10;HaplotypeScore=49.6174;InbreedingCoeff=0.7224;MQ=54.59;MQ0=15;MQRankSum=-1.821;QD=8.80;ReadPosRankSum=1.474;VQSLOD=1.5463;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,117,956	0/0:4,0:4:11.03:0,11,79	0/1:19,0:5:1.39:1,0,20	0/0:21,0:6:11.92:0,12,87	0/0:9,0:6:17.98:0,18,147	0/0:18,0:14:38.63:0,39,307	0/0:18,0:18:46.97:0,47,375	0/0:30,1:29:24.80:0,25,447	0/0:12,0:12:32.96:0,33,271	0/0:14,0:14:28.99:0,29,240	0/0:20,0:19:40.66:0,41,317	1/1:0,8:8:18.05:192,18,0	0/0:6,0:6:17.98:0,18,148	0/0:8,0:7:14.91:0,15,123	0/0:10,0:10:26.97:0,27,222	0/0:7,0:7:14.98:0,15,123	0/0:21,0:22:58.59:0,59,472	0/0:27,1:28:36.91:0,37,509	0/0:21,0:21:53.93:0,54,443	0/0:21,0:21:44.27:0,44,367	0/0:9,0:9:20.97:0,21,172	0/1:7,1:8:11.01:11,0,127	1/1:6,12:16:24.06:256,24,0	1/1:5,14:19:11.44:325,11,0	0/0:20,0:18:38.91:0,39,316	0/0:14,0:17:43.97:0,44,350	0/0:24,0:23:55.95:0,56,449	0/0:9,0:7:20.77:0,21,160
chr10	38671844	.	T	TA	8013.29	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-11.263;DP=416;FS=0.000;HRun=8;HaplotypeScore=43.6013;InbreedingCoeff=0.9520;MQ=77.96;MQ0=0;MQRankSum=-2.553;QD=27.92;ReadPosRankSum=1.888;VQSLOD=5.0801;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:81.04:0,81,741	1/1:0,8:8:24.07:277,24,0	0/0:17,0:17:1.82:0,2,225	0/0:9,0:9:20.48:0,20,180	1/1:1,15:16:45.03:488,45,0	0/0:0,0:17:34.63:0,35,102	0/0:1,0:14:26.48:0,26,78	1/1:7,25:32:78.13:836,78,0	1/1:0,18:18:51.15:588,51,0	0/0:13,0:13:36:0,36,321	0/0:16,0:16:41.93:0,42,369	1/1:2,9:11:24.07:277,24,0	1/1:1,11:12:30.09:346,30,0	1/1:0,11:11:24.07:277,24,0	1/1:2,13:15:33.10:381,33,0	1/1:0,12:11:30.09:346,30,0	1/1:3,18:21:51.15:589,51,0	0/0:12,0:12:32.98:0,33,291	1/1:7,9:16:27.06:300,27,0	1/1:1,12:13:36.07:402,36,0	1/1:2,12:14:33.10:381,33,0	1/1:0,4:4:9.03:104,9,0	1/1:0,9:9:24.07:277,24,0	1/1:1,12:13:33.10:381,33,0	1/1:0,11:11:30.09:346,30,0	1/1:4,18:22:54.16:623,54,0	1/1:2,15:17:39.12:450,39,0	1/1:2,10:12:30.09:346,30,0
chr10	38671964	.	TAC	T	338.98	PASS	AB=0.932;AC=19;AF=0.633;AN=30;BaseQRankSum=3.489;DP=398;FS=23.572;HRun=0;HaplotypeScore=73.2042;InbreedingCoeff=0.3559;MQ=70.81;MQ0=17;MQRankSum=-1.500;QD=2.51;ReadPosRankSum=2.079;VQSLOD=-0.2275;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:34:9.02:0,9,106	./.	./.	./.	0/1:9,2:11:0:0,0,0	0/1:18,0:18:16.89:26,0,17	0/1:18,1:19:20.06:20,0,117	./.	1/1:9,0:9:3:27,3,0	0/0:16,0:16:6:0,6,55	0/0:15,0:15:6.01:0,6,64	1/1:15,5:20:6.01:64,6,0	1/1:7,0:7:2.92:17,3,0	./.	1/1:7,1:8:5.97:52,6,0	1/1:6,0:6:2.98:21,3,0	1/1:8,1:10:6.02:64,6,0	0/0:11,0:13:11.98:0,12,109	./.	./.	./.	./.	./.	1/1:15,2:17:8.55:87,9,0	./.	./.	1/1:5,0:9:11.79:80,12,0	./.
chr10	38672017	.	T	TG	1760.63	PASS	AB=1.000;AC=32;AF=0.571;AN=56;BaseQRankSum=11.488;DP=414;FS=3.533;HRun=7;HaplotypeScore=121.1421;InbreedingCoeff=0.8164;MQ=59.56;MQ0=18;MQRankSum=-12.648;QD=8.80;ReadPosRankSum=-6.348;VQSLOD=0.0510;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:29:53.99:0,54,521	1/1:4,0:4:8.87:56,9,0	0/0:26,0:17:43.98:0,44,386	0/0:27,0:18:38.90:0,39,339	1/1:19,1:20:18.49:68,18,0	0/0:14,0:14:33.05:0,33,319	0/0:27,0:27:62.92:0,63,604	1/1:16,0:16:26.70:200,27,0	1/1:9,0:8:14.75:92,15,0	0/0:19,0:17:25.99:0,26,353	0/0:10,0:9:21.03:0,21,203	0/0:14,0:14:25.86:0,26,240	1/1:12,1:13:29.53:189,30,0	1/1:12,0:11:16.46:101,16,0	1/1:8,0:8:13.71:75,14,0	1/1:10,0:10:17.68:110,18,0	1/1:15,1:16:33.24:206,33,0	0/0:12,0:12:24.03:0,24,230	1/1:6,5:9:17.90:180,18,0	1/1:5,0:5:6.11:18,6,0	1/1:30,0:30:27.94:134,28,0	0/1:7,0:6:4.12:17,0,4	0/0:6,0:6:12.02:0,12,116	0/0:26,0:25:24.18:0,24,401	1/1:4,0:4:10.17:50,10,0	0/1:16,0:16:21.52:137,0,22	1/1:15,2:17:42.46:277,42,0	1/1:0,2:2:6.02:69,6,0
chr10	38672018	.	G	GA	157.74	PASS	AB=0.976;AC=12;AF=0.214;AN=56;BaseQRankSum=5.186;DP=416;FS=6.641;HRun=0;HaplotypeScore=126.7807;InbreedingCoeff=0.3344;MQ=60.88;MQ0=18;MQRankSum=-5.808;QD=1.30;ReadPosRankSum=-5.066;VQSLOD=-0.2349;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,1:29:62.41:0,62,797	0/0:4,0:4:2.24:0,2,4	0/0:27,0:18:48.37:0,48,600	0/0:29,0:18:45.03:0,45,530	1/1:19,1:20:18.52:87,19,0	0/0:13,0:13:33.11:0,33,461	0/0:30,0:30:69.20:0,69,927	0/1:15,1:16:49.24:49,0,50	0/0:9,0:8:8.05:0,8,29	0/0:17,1:16:3.17:0,3,523	0/0:10,0:9:21.07:0,21,292	0/0:14,0:14:31.32:0,31,390	0/0:13,0:13:4.18:0,4,28	0/0:12,0:11:13.89:0,14,49	0/0:8,0:8:10.95:0,11,45	0/0:10,0:10:7.65:0,8,30	0/0:16,0:16:10.49:0,10,62	0/0:12,0:12:33.03:0,33,399	0/1:10,1:9:21.46:79,0,21	0/0:5,0:5:1.28:0,1,13	1/1:28,1:29:7.31:35,7,0	0/1:6,0:5:0.83:1,0,7	0/0:6,0:6:12.04:0,12,167	0/0:26,1:26:16.09:0,16,639	0/1:4,0:4:0.48:0,0,5	0/1:16,0:16:7.11:7,0,112	0/1:17,0:17:4.90:15,0,5	1/1:2,0:2:5.60:27,6,0
chr10	38672023	.	G	GGGAGGGA	11325.12	PASS	AB=0.541;AC=33;AF=0.589;AN=56;BaseQRankSum=5.455;DP=482;FS=2.581;HRun=0;HaplotypeScore=142.2363;InbreedingCoeff=0.8470;MQ=61.97;MQ0=14;MQRankSum=-13.292;QD=43.56;ReadPosRankSum=-5.109;VQSLOD=3.9337;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:27:60.19:0,60,1446	1/1:0,5:7:9.03:358,9,0	0/0:32,0:23:42.31:0,42,1036	0/0:31,0:20:45.14:0,45,987	1/1:4,18:25:3.80:38,4,0	0/0:15,0:15:36.11:0,36,845	0/0:30,0:30:73.11:0,73,1612	1/1:5,10:22:54.03:1504,54,0	1/1:2,8:12:15.05:595,15,0	0/0:18,0:16:29.08:0,29,960	0/0:9,0:9:24.08:0,24,584	0/0:14,0:14:31.91:0,32,628	1/1:1,10:14:30.10:1188,30,0	1/1:1,10:14:24.08:745,24,0	1/1:1,5:12:15.01:434,15,0	1/1:3,9:17:20.73:632,21,0	1/1:3,12:18:39.13:1248,39,0	0/0:11,0:11:27.08:0,27,614	1/1:17,1:16:38.99:781,39,0	1/1:0,4:8:6.02:154,6,0	1/1:2,22:33:16.15:452,16,0	1/1:2,4:10:5.95:137,6,0	0/0:6,0:6:18.01:0,18,354	0/0:27,0:27:39.97:0,40,1138	1/1:0,4:4:9.03:325,9,0	0/1:3,9:20:52.91:1006,0,53	1/1:4,10:20:45.11:1486,45,0	1/1:4,0:4:12.04:242,12,0
chr10	38672067	.	A	ACT	2659.54	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-0.188;DP=617;FS=5.204;HRun=0;HaplotypeScore=159.6351;InbreedingCoeff=0.9747;MQ=76.60;MQ0=1;MQRankSum=-0.362;QD=31.66;ReadPosRankSum=3.998;VQSLOD=5.5169;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:78.12:0,78,967	0/0:10,0:10:18.06:0,18,231	0/0:51,0:45:29.82:0,30,906	0/0:43,0:40:80.02:0,80,927	0/0:25,0:25:45:0,45,541	0/0:16,0:15:45.09:0,45,538	0/0:30,0:30:72.15:0,72,860	0/0:24,0:24:69.16:0,69,799	0/0:23,0:23:54.08:0,54,651	0/0:26,0:26:72.23:0,72,924	0/0:8,0:8:18.06:0,18,231	1/1:4,28:32:66.09:1120,66,0	0/0:17,0:17:33.03:0,33,380	0/0:19,0:19:27.07:0,27,336	0/0:21,0:21:42.11:0,42,516	0/0:23,0:23:42.09:0,42,527	0/0:23,0:23:50.91:0,51,537	0/0:15,0:15:39.13:0,39,506	0/0:11,0:10:18.05:0,18,219	0/0:9,0:9:18:0,18,200	0/0:42,0:42:72.13:0,72,846	0/0:12,0:12:24.06:0,24,298	1/1:1,14:15:24.02:407,24,0	1/1:5,32:37:75.09:1274,75,0	0/0:10,0:10:24.08:0,24,312	0/0:14,0:14:27.05:0,27,335	0/0:25,0:25:53.99:0,54,657	0/0:5,0:5:12.04:0,12,156
chr10	38674518	.	G	GCA	1158.36	PASS	AB=0.913;AC=30;AF=0.556;AN=54;BaseQRankSum=2.106;DP=644;FS=6.689;HRun=0;HaplotypeScore=195.5418;InbreedingCoeff=0.4471;MQ=46.94;MQ0=10;MQRankSum=-5.913;QD=2.74;ReadPosRankSum=-3.546;VQSLOD=1.3812;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:25,1:32:3.99:4,0,261	1/1:9,0:9:5.98:66,6,0	./.	0/1:13,0:2:0:0,0,0	1/1:18,3:20:6.01:69,6,0	0/0:11,0:20:14.20:0,14,70	0/0:13,0:24:15.19:0,15,74	1/1:26,0:26:36.91:219,37,0	1/1:17,5:22:8.94:75,9,0	0/0:14,0:26:25.40:0,25,139	0/0:3,0:6:5.68:0,6,28	0/0:35,0:35:22.73:0,23,112	1/1:22,3:25:9.49:108,9,0	0/1:22,4:25:0.32:0,0,1	1/1:13,1:14:3.10:17,3,0	0/1:12,6:18:0.09:0,0,0	1/1:23,10:32:5.11:88,5,0	0/0:10,0:28:41.02:0,41,199	1/1:12,0:12:2.97:10,3,0	1/1:16,0:16:6.02:89,6,0	0/1:40,2:42:0.39:1,0,0	0/0:18,6:24:2.82:0,3,33	0/1:21,0:20:0.07:0,0,0	0/0:43,0:43:0.28:0,0,13	1/1:23,5:27:6.02:90,6,0	0/1:24,3:25:73.08:226,0,73	1/1:22,2:24:8.96:197,9,0	0/1:11,2:13:7.70:58,0,8
chr10	38674540	.	ACACACACACACACACG	A	1332.92	PASS	AB=0.764;AC=6;AF=0.107;AN=56;BaseQRankSum=4.108;DP=742;FS=0.971;HRun=0;HaplotypeScore=282.7191;InbreedingCoeff=0.4342;MQ=47.58;MQ0=12;MQRankSum=-2.527;QD=11.20;ReadPosRankSum=-0.511;VQSLOD=2.0455;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:78.13:0,78,3716	0/0:13,0:13:18.76:0,19,579	0/1:23,0:9:13.17:13,0,278	0/0:29,0:10:24.43:0,24,378	0/0:21,0:20:11.96:0,12,445	0/0:19,0:19:42.11:0,42,1734	0/0:30,0:30:66.61:0,67,2278	0/0:33,0:32:89.89:0,90,3303	0/0:26,0:26:21.02:0,21,482	0/0:29,0:28:74.11:0,74,2518	0/0:5,0:5:6.02:0,6,351	1/1:1,37:38:26.79:1161,27,0	0/0:33,0:33:37.11:0,37,1115	0/0:30,0:29:9.21:0,9,235	0/0:20,0:20:15.05:0,15,489	0/0:20,0:20:12.66:0,13,304	0/0:35,0:34:44.52:0,45,1169	0/0:38,0:38:99:0,102,3822	0/0:21,0:21:39.87:0,40,723	0/0:17,0:17:16.41:0,16,714	0/0:54,0:54:25.12:0,25,514	0/0:23,0:23:12.22:0,12,426	1/1:2,16:17:0.84:2,1,0	0/1:4,35:39:92.94:271,0,93	0/0:29,0:28:12.04:0,12,618	0/0:33,0:31:89.18:0,89,3363	0/0:20,0:20:36.54:0,37,1195	0/0:14,0:14:29.78:0,30,754
chr10	38676404	.	GCA	G	6625.42	PASS	AB=0.838;AC=36;AF=0.692;AN=52;BaseQRankSum=3.436;DP=740;FS=23.616;HRun=0;HaplotypeScore=123.6558;InbreedingCoeff=0.5296;MQ=60.75;MQ0=29;MQRankSum=-1.214;QD=12.99;ReadPosRankSum=-0.304;VQSLOD=2.3851;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:38,5:42:1.97:2,0,727	1/1:0,9:9:17.88:183,18,0	./.	./.	1/1:4,15:20:35.77:366,36,0	0/0:21,1:22:14.31:0,14,583	0/0:34,0:34:27.96:0,28,547	1/1:19,3:21:2.06:78,2,0	1/1:9,14:25:50.64:515,51,0	0/1:24,3:27:47.20:47,0,607	0/1:19,2:21:0.76:1,0,393	0/0:13,0:18:10.88:0,11,282	1/1:7,11:18:39.11:437,39,0	1/1:3,23:28:68.86:737,69,0	1/1:5,10:18:38.74:384,39,0	1/1:9,12:25:41.45:392,41,0	1/1:18,20:39:77.99:825,78,0	0/1:17,0:18:3.72:4,0,352	1/1:11,5:16:15.04:169,15,0	0/1:13,11:26:7.02:327,0,7	1/1:22,9:34:47.24:432,47,0	1/1:23,10:33:50.91:529,51,0	0/0:21,0:23:12.78:0,13,279	0/0:23,0:32:56.45:0,56,623	1/1:6,14:22:35.77:366,36,0	0/1:18,11:31:13.08:254,0,13	1/1:11,13:24:47.95:510,48,0	1/1:3,5:8:5.77:67,6,0
chr10	38676500	.	G	GAA	1136.21	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=0.423;DP=695;FS=2.957;HRun=10;HaplotypeScore=114.3250;InbreedingCoeff=0.9912;MQ=72.57;MQ0=1;MQRankSum=0.535;QD=19.59;ReadPosRankSum=-0.181;VQSLOD=2.6831;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,117,1169	0/0:9,0:9:24.05:0,24,244	0/0:37,0:33:49.94:0,50,482	0/0:23,0:19:29.79:0,30,280	0/0:30,0:30:66:0,66,655	0/0:36,0:36:49.54:0,50,848	0/0:23,1:25:15.11:0,15,569	0/0:38,0:39:98.82:0,99,952	0/0:23,0:23:57.08:0,57,573	0/0:42,0:43:86.85:0,87,933	0/0:15,0:15:33.01:0,33,330	1/1:6,5:16:33.56:375,34,0	0/0:15,0:16:20.71:0,21,259	0/0:18,0:19:44.78:0,45,433	0/0:23,0:24:44.73:0,45,501	0/0:27,0:27:53.99:0,54,543	0/0:22,0:23:53.76:0,54,514	0/0:21,0:20:51.07:0,51,504	0/0:20,0:20:48.08:0,48,488	0/0:25,0:25:54.04:0,54,535	0/0:14,0:15:41.50:0,42,372	0/0:25,0:26:56.78:0,57,546	1/1:6,14:21:26.28:314,26,0	1/1:4,16:21:41.63:590,42,0	0/0:14,0:14:33.06:0,33,335	0/0:33,0:33:87.12:0,87,866	0/0:25,0:25:71.86:0,72,706	0/0:17,0:17:42.07:0,42,427
chr10	38676561	.	TAC	T	1092.18	PASS	AB=1.000;AC=14;AF=0.250;AN=56;BaseQRankSum=8.745;DP=853;FS=13.481;HRun=0;HaplotypeScore=295.5635;InbreedingCoeff=-0.1282;MQ=55.38;MQ0=1;MQRankSum=-8.650;QD=2.82;ReadPosRankSum=5.578;VQSLOD=0.9508;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:48:99:0,99,1578	1/1:15,0:14:11.73:83,12,0	0/0:32,1:23:10.60:0,11,375	0/0:36,1:35:20.39:0,20,733	0/0:29,0:29:8.95:0,9,73	0/0:34,0:34:77.82:0,78,1245	0/0:36,1:37:44.85:0,45,1193	0/1:48,0:47:99:114,0,457	0/1:24,0:25:18.37:167,0,18	0/0:45,2:47:32.52:0,33,1499	0/0:21,0:21:45:0,45,695	0/0:25,0:25:38.98:0,39,432	0/1:26,0:25:56.66:108,0,57	0/1:22,0:22:26.24:116,0,26	0/1:43,0:44:99:186,0,111	0/1:45,0:45:10.55:209,0,11	0/1:18,0:18:11.97:12,0,53	0/0:28,0:28:45.47:0,45,840	0/1:29,0:28:78.13:78,0,245	0/0:27,0:27:0.83:0,1,2	0/0:29,0:28:2.51:0,3,24	0/1:25,0:25:6.34:38,0,6	0/0:26,0:25:8.92:0,9,106	0/0:28,0:27:24.43:0,24,273	0/1:26,0:26:18.15:38,0,18	0/1:40,0:41:21.64:22,0,733	0/1:23,0:23:76.69:77,0,126	0/0:16,0:16:14.62:0,15,276
chr10	38676569	.	C	CACACACACACACAT	34828.92	PASS	AB=0.845;AC=38;AF=0.679;AN=56;BaseQRankSum=1.945;DP=901;FS=46.480;HRun=0;HaplotypeScore=401.5982;InbreedingCoeff=0.8595;MQ=49.63;MQ0=1;MQRankSum=-12.509;QD=58.24;ReadPosRankSum=2.102;VQSLOD=3.3615;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:54:99:0,126,3717	1/1:12,2:13:20.89:776,21,0	0/0:35,0:21:44.80:0,45,752	0/0:41,0:35:28.75:0,29,1330	1/1:22,4:29:2.83:24,3,0	0/0:33,0:33:84.22:0,84,2903	0/0:35,0:35:87.26:0,87,2821	1/1:52,0:51:96.11:3148,96,0	1/1:22,8:30:47.39:2076,47,0	0/0:46,0:46:99:0,114,3844	0/0:25,0:25:60.57:0,61,1582	1/1:1,0:33:39.13:1691,39,0	1/1:20,6:26:54.10:2668,54,0	1/1:16,7:24:42.11:2158,42,0	1/1:27,16:43:62.08:2999,62,0	1/1:33,12:45:60.19:3125,60,0	1/1:14,3:18:26.74:853,27,0	0/0:33,0:33:46.77:0,47,1748	1/1:23,6:28:63.07:2482,63,0	1/1:28,1:29:17.78:675,18,0	1/1:40,0:39:14.17:349,14,0	1/1:18,5:23:14.11:570,14,0	0/1:23,0:25:0.07:34,0,0	1/1:25,0:30:33.02:802,33,0	1/1:21,4:25:30.08:1519,30,0	0/1:31,11:42:4.79:5177,0,5	1/1:18,4:22:39.06:1406,39,0	1/1:7,9:16:36.12:2295,36,0
chr10	38676579	.	CAT	C	2667.14	PASS	AB=0.853;AC=17;AF=0.304;AN=56;BaseQRankSum=7.370;DP=927;FS=31.506;HRun=0;HaplotypeScore=324.7112;InbreedingCoeff=-0.2988;MQ=50.84;MQ0=2;MQRankSum=-7.658;QD=5.57;ReadPosRankSum=-2.663;VQSLOD=1.6361;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:53:99:0,148,2258	0/1:11,3:13:47.04:137,0,47	0/0:43,0:28:72.54:0,73,825	0/0:42,0:35:28.51:0,29,961	1/1:22,4:26:2.71:23,3,0	0/0:34,0:34:95.78:0,96,1613	0/0:36,0:36:89.55:0,90,1618	0/1:49,9:57:99:242,0,1349	0/1:27,3:30:99:308,0,196	0/0:45,0:45:99:0,113,2078	0/0:22,0:22:62.98:0,63,961	0/0:36,0:36:50.66:0,51,432	0/1:22,7:28:99:228,0,148	0/1:23,4:27:99:176,0,161	0/1:41,6:47:99:422,0,253	0/1:36,12:48:99:423,0,183	0/1:16,4:20:83.84:84,0,99	0/0:29,0:29:22.50:0,22,1064	0/1:24,5:29:99:203,0,556	0/1:22,4:26:2.12:2,0,122	0/0:46,3:48:33.68:0,34,258	0/1:14,9:23:26.53:107,0,27	0/0:24,0:23:11.02:0,11,187	0/0:33,0:32:39.37:0,39,420	0/1:19,3:22:81.94:82,0,95	0/1:41,5:46:99:169,0,1126	0/1:15,6:21:99:204,0,193	0/1:13,0:13:15.79:16,0,310
chr10	38676608	.	TAC	T	11831.84	PASS	AB=0.642;AC=33;AF=0.589;AN=56;BaseQRankSum=14.508;DP=935;FS=10.078;HRun=0;HaplotypeScore=245.9334;InbreedingCoeff=0.9243;MQ=55.95;MQ0=9;MQRankSum=-4.484;QD=23.02;ReadPosRankSum=1.791;VQSLOD=3.8399;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:53:99:0,130,2127	1/1:2,9:10:20.95:273,21,0	0/0:52,0:38:85.15:0,85,1259	0/0:42,0:35:70.14:0,70,1087	1/1:5,14:19:17.91:234,18,0	0/0:34,0:34:78.27:0,78,1300	0/0:42,0:42:99:0,108,1658	1/1:12,48:56:42.36:1581,42,0	1/1:9,20:28:48.03:624,48,0	0/0:56,0:56:99:0,135,2249	0/0:19,0:19:48.03:0,48,808	0/0:35,0:35:48.06:0,48,783	1/1:2,26:28:44.35:565,44,0	1/1:2,19:20:44.86:585,45,0	1/1:11,30:40:56.56:740,57,0	1/1:6,35:41:87.14:1131,87,0	1/1:4,14:18:30.10:390,30,0	0/0:24,0:24:55.14:0,55,1048	0/1:15,19:33:43.52:610,0,44	1/1:2,19:21:38.97:507,39,0	1/1:8,57:64:95.54:1245,96,0	1/1:4,15:19:29.59:389,30,0	0/0:22,0:22:51.16:0,51,816	0/0:41,0:40:66.62:0,67,1060	1/1:3,23:25:54.18:702,54,0	1/1:10,36:44:60.26:1322,60,0	1/1:4,15:17:36.12:468,36,0	1/1:3,13:16:36.12:464,36,0
chr10	38677815	.	AGCACCATGCCTGCCTGCACCATGCCTGCCT	A	2718.77	PASS	AC=18;AF=0.333;AN=54;BaseQRankSum=6.233;DP=604;FS=0.794;HRun=0;HaplotypeScore=377.1912;InbreedingCoeff=0.8144;MQ=57.38;MQ0=2;MQRankSum=-6.177;QD=16.99;ReadPosRankSum=3.471;VQSLOD=1.2321;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:42.14:0,42,5080	1/1:7,0:7:6.02:262,6,0	0/0:20,0:13:12.04:0,12,229	0/0:31,0:24:15.04:0,15,351	1/1:10,0:10:6.02:80,6,0	0/0:10,0:10:15.05:0,15,1259	0/0:34,0:34:64.97:0,65,4423	0/0:15,0:15:18.06:0,18,516	1/1:12,16:28:6.02:458,6,0	0/0:19,0:19:30.10:0,30,2038	0/0:8,0:8:6.02:0,6,764	0/0:22,0:30:27.55:0,28,804	1/1:18,0:18:21.05:242,21,0	1/1:28,0:28:24.05:306,24,0	1/1:10,19:29:6.96:460,7,0	1/1:7,9:16:12.04:917,12,0	./.	0/0:40,0:40:53.25:0,53,9257	0/0:21,0:21:24.08:0,24,2555	0/0:15,0:15:9.03:0,9,907	0/0:74,0:73:99:0,128,10608	1/1:5,10:15:3.01:123,3,0	0/0:4,0:9:7.84:0,8,198	0/0:17,0:17:19.88:0,20,667	1/1:9,0:9:3.01:55,3,0	0/0:12,0:12:12.04:0,12,1240	0/0:17,0:16:27.09:0,27,2550	0/0:16,0:16:24.08:0,24,1020
chr10	38678738	.	GGT	G	1915.72	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=10.205;DP=548;FS=0.000;HRun=0;HaplotypeScore=70.8093;InbreedingCoeff=0.9886;MQ=74.30;MQ0=0;MQRankSum=-2.009;QD=34.21;ReadPosRankSum=3.511;VQSLOD=5.8907;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,108,2024	0/0:4,0:4:12.04:0,12,242	0/0:13,0:12:33.09:0,33,539	0/0:16,0:16:34.01:0,34,509	0/0:15,0:15:45.09:0,45,828	0/0:21,0:21:63.13:0,63,1118	0/0:19,0:19:57.07:0,57,894	0/0:23,0:23:69.16:0,69,1169	0/0:14,0:14:42.12:0,42,782	0/0:24,0:24:72.25:0,72,1387	0/0:14,0:14:38.86:0,39,690	1/1:2,16:18:47.75:735,48,0	0/0:26,0:26:78.23:0,78,1445	0/0:17,0:17:47.88:0,48,915	0/0:19,0:19:57.15:0,57,1012	0/0:20,0:20:60.15:0,60,1062	0/0:20,0:20:57.06:0,57,996	0/0:23,0:23:69.21:0,69,1324	0/0:21,0:21:62.99:0,63,837	0/0:22,0:22:66.12:0,66,1207	0/0:14,0:14:39.10:0,39,714	0/0:16,0:16:48.14:0,48,895	1/1:4,10:14:28.11:407,28,0	1/1:1,23:24:57.19:916,57,0	0/0:19,0:19:57.18:0,57,1095	0/0:18,0:18:54.06:0,54,944	0/0:37,0:36:99:0,111,1994	0/0:20,0:20:60.15:0,60,1122
chr10	38678739	.	GT	G	277.63	PASS	AB=0.900;AC=7;AF=0.125;AN=56;BaseQRankSum=10.789;DP=545;FS=3.384;HRun=10;HaplotypeScore=65.4544;InbreedingCoeff=0.8599;MQ=74.36;MQ0=0;MQRankSum=-1.726;QD=3.75;ReadPosRankSum=3.124;VQSLOD=-0.2594;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:38:99:0,105,1097	0/0:4,0:4:12.03:0,12,133	0/0:13,0:12:26.84:0,27,264	0/0:17,0:17:29.84:0,30,275	0/0:15,0:15:16.09:0,16,405	0/0:20,1:21:31.09:0,31,562	0/0:15,1:16:16.05:0,16,398	0/0:22,0:23:51.08:0,51,529	0/0:14,0:14:39.10:0,39,428	0/0:24,0:24:63.16:0,63,691	0/0:14,0:14:33.08:0,33,358	1/1:18,0:18:39.02:147,39,0	0/0:26,0:26:72.18:0,72,788	0/0:17,0:17:45.11:0,45,490	0/0:18,0:18:48.11:0,48,522	0/0:19,0:19:48.13:0,48,531	0/0:19,1:20:24.89:0,25,484	0/0:24,0:24:66.16:0,66,719	0/0:19,1:20:7.03:0,7,299	0/0:22,0:22:57.15:0,57,623	0/0:13,0:13:33.09:0,33,365	0/0:17,0:17:45.11:0,45,491	1/1:14,0:14:22.81:90,23,0	1/1:24,0:24:49.03:182,49,0	0/0:19,0:19:54.12:0,54,578	0/1:16,2:18:0.94:1,0,433	0/0:34,1:36:72.88:0,73,997	0/0:20,0:20:60.11:0,60,643
chr10	38678825	.	GCCAGGTGACTGACTCATCATA	G	3135.66	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.511;DP=714;FS=9.747;HRun=0;HaplotypeScore=378.9788;InbreedingCoeff=0.9237;MQ=82.15;MQ0=0;MQRankSum=-8.194;QD=63.99;ReadPosRankSum=-4.532;VQSLOD=1.4703;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,102,9754	0/0:4,0:4:12.04:0,12,1212	0/0:23,0:23:66.01:0,66,3898	0/0:24,0:23:54.47:0,54,3957	0/0:26,0:26:78.27:0,78,7392	0/0:34,0:34:99:0,102,9468	0/0:18,0:18:45.14:0,45,3425	0/0:29,0:29:84.29:0,84,6978	0/0:25,0:25:72.25:0,72,6573	0/0:32,0:32:96.33:0,96,8807	0/0:32,0:32:96.33:0,96,9442	1/1:5,14:19:45.15:1705,45,0	0/0:31,0:31:90.31:0,90,8242	0/0:24,0:24:69.24:0,69,6607	0/0:19,0:19:57.19:0,57,4805	0/0:27,0:27:81.28:0,81,7219	0/0:18,0:18:51.18:0,51,4669	0/0:34,0:34:99:0,99,8790	0/0:19,0:19:57.20:0,57,4688	0/0:41,0:41:99:0,123,11481	0/0:22,0:22:63.22:0,63,5599	0/0:36,0:36:99:0,105,9951	1/1:5,19:24:47.90:1386,48,0	1/1:4,2:6:3.01:177,3,0	0/0:23,0:23:66.23:0,66,6024	0/0:29,0:29:87.26:0,87,8043	0/0:34,0:34:99:0,99,8575	0/0:26,0:26:78.27:0,78,6939
chr10	38680506	.	GA	G	1238.52	PASS	AB=0.930;AC=8;AF=0.143;AN=56;BaseQRankSum=9.446;DP=663;FS=2.126;HRun=10;HaplotypeScore=68.0361;InbreedingCoeff=0.7099;MQ=72.52;MQ0=0;MQRankSum=-0.214;QD=10.96;ReadPosRankSum=2.949;VQSLOD=3.0987;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:78.14:0,78,831	0/0:10,0:10:30.07:0,30,325	0/1:23,1:19:4.33:4,0,183	0/0:17,0:16:21.01:0,21,210	0/0:35,1:36:55.05:0,55,811	0/0:22,0:24:59.99:0,60,637	0/0:25,0:25:63.17:0,63,697	0/0:32,2:34:35.58:0,36,831	0/0:21,2:23:5.05:0,5,512	0/0:34,0:34:75.19:0,75,811	0/0:30,0:31:66.01:0,66,710	1/1:3,13:16:38.99:338,39,0	0/0:15,1:17:16.01:0,16,376	0/0:17,1:18:13.04:0,13,360	0/0:18,1:19:19.07:0,19,439	0/0:17,0:17:25.17:0,25,505	0/0:34,1:35:79.17:0,79,1080	0/0:28,0:28:78.18:0,78,843	0/0:20,0:21:53.97:0,54,569	0/0:25,1:26:28.86:0,29,567	0/1:16,2:18:9.99:10,0,356	0/0:23,1:24:25.09:0,25,505	1/1:6,20:26:23.70:435,24,0	1/1:4,25:29:68.98:599,69,0	0/0:21,1:22:28.09:0,28,532	0/0:16,0:16:45.08:0,45,484	0/0:29,0:28:72.18:0,72,788	0/0:14,0:14:42.09:0,42,455
chr10	38681159	.	C	CAA	1727.81	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-5.718;DP=568;FS=4.841;HRun=9;HaplotypeScore=73.3915;InbreedingCoeff=0.9696;MQ=66.87;MQ0=0;MQRankSum=1.430;QD=30.85;ReadPosRankSum=-0.522;VQSLOD=3.7847;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:96.21:0,96,1018	0/0:4,0:4:9.02:0,9,96	0/0:23,0:20:23.46:0,23,269	0/0:23,0:17:26.95:0,27,281	0/0:19,0:19:42.09:0,42,447	0/0:19,0:19:51.12:0,51,543	0/0:23,0:23:54.11:0,54,575	0/0:35,0:35:86.90:0,87,899	0/0:30,0:30:63.13:0,63,670	0/0:25,0:25:60.14:0,60,638	0/0:8,0:8:24.06:0,24,255	1/1:9,18:27:57.13:825,57,0	0/0:22,0:22:54.11:0,54,563	0/0:24,0:24:60.13:0,60,638	0/0:20,0:20:45.10:0,45,479	0/0:20,0:20:48.10:0,48,511	0/0:20,0:20:21.83:0,22,480	0/0:18,0:18:45.06:0,45,468	0/0:25,0:26:62.84:0,63,644	0/0:10,0:11:29.81:0,30,298	0/0:21,0:21:54.10:0,54,567	0/0:11,0:12:23.77:0,24,226	1/1:2,13:15:42.14:630,42,0	1/1:1,12:14:26.76:415,27,0	0/0:12,0:12:36.09:0,36,383	0/0:24,0:24:54.10:0,54,574	0/0:23,0:23:63.15:0,63,670	0/0:9,0:9:15.02:0,15,160
chr10	38681366	.	ATAATAAATAAAT	A	1198.86	PASS	AB=0.954;AC=16;AF=0.333;AN=48;BaseQRankSum=4.455;DP=263;FS=0.000;HRun=0;HaplotypeScore=67.7024;InbreedingCoeff=-0.0823;MQ=32.25;MQ0=77;MQRankSum=-2.224;QD=9.51;ReadPosRankSum=2.231;VQSLOD=1.2946;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:13:26.73:0,27,371	0/1:4,0:4:30.96:157,0,31	./.	./.	0/1:13,0:12:39.97:77,0,40	0/0:10,0:8:17.51:0,18,248	0/0:9,0:5:14.84:0,15,165	0/1:33,0:13:56.67:57,0,159	0/1:3,0:3:27.96:76,0,28	0/0:14,0:9:20.01:0,20,136	0/0:11,0:9:17.30:0,17,99	0/1:1,6:7:8.97:225,0,9	0/0:5,0:5:8.79:0,9,52	0/0:8,0:7:8.88:0,9,61	1/1:5,0:4:3.01:85,3,0	0/1:9,0:8:37.94:155,0,38	0/0:13,0:9:8.86:0,9,50	0/0:21,0:16:29.94:0,30,350	0/1:18,0:15:99:176,0,324	0/1:10,0:7:99:152,0,101	./.	0/0:3,0:3:2.92:0,3,17	1/1:4,0:3:5.97:47,6,0	./.	0/0:8,0:7:12.04:0,12,372	0/1:10,0:6:48.84:49,0,77	0/1:6,0:5:48.95:71,0,49	1/1:4,0:1:2.97:20,3,0
chr10	38681367	.	TAATAAATAAATA	T	1684.24	PASS	AB=0.881;AC=26;AF=0.650;AN=40;BaseQRankSum=-0.486;DP=255;FS=6.054;HRun=0;HaplotypeScore=64.5061;InbreedingCoeff=0.3781;MQ=32.47;MQ0=74;MQRankSum=-2.886;QD=11.78;ReadPosRankSum=0.424;VQSLOD=0.9026;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:12:8.70:0,9,230	1/1:2,2:4:6.02:205,6,0	./.	./.	1/1:7,6:12:3.01:103,3,0	0/0:7,0:8:6.96:0,7,182	0/0:7,0:5:6.02:0,6,87	1/1:33,0:13:9.03:154,9,0	1/1:2,1:3:3.01:103,3,0	1/1:11,0:9:3.88:10,4,0	1/1:9,0:8:1.55:4,2,0	1/1:7,0:7:6.02:195,6,0	./.	./.	1/1:4,1:4:3.01:103,3,0	1/1:5,4:8:6.02:206,6,0	0/0:9,4:9:2.92:0,3,8	0/0:11,0:16:18.06:0,18,266	0/1:16,1:14:96.71:274,0,97	0/1:7,2:6:29.07:197,0,29	./.	./.	./.	./.	0/0:3,0:7:12.04:0,12,293	1/1:8,1:6:6.02:122,6,0	1/1:5,1:5:3.01:103,3,0	1/1:4,0:1:3.01:44,3,0
chr10	38681432	.	TA	T	1934.47	PASS	AB=0.526;AC=17;AF=0.315;AN=54;BaseQRankSum=-1.407;DP=256;FS=4.789;HRun=10;HaplotypeScore=45.1426;InbreedingCoeff=0.8415;MQ=67.06;MQ0=0;MQRankSum=0.648;QD=20.15;ReadPosRankSum=-0.067;VQSLOD=4.3361;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:30.06:0,30,332	0/0:3,0:3:6.02:0,6,66	0/0:8,0:7:6.06:0,6,69	0/0:8,0:6:8.14:0,8,77	0/0:14,0:15:41.95:0,42,445	0/0:8,0:8:18.01:0,18,186	0/0:4,0:4:12.03:0,12,133	1/1:4,22:26:62.98:547,63,0	0/0:5,0:5:12.03:0,12,133	0/0:8,0:8:24.06:0,24,265	0/0:8,0:8:21.06:0,21,232	1/1:0,4:4:12:104,12,0	0/0:6,0:6:15.04:0,15,166	0/0:5,0:5:15.04:0,15,166	0/0:7,0:7:18.05:0,18,199	0/0:11,0:11:24.02:0,24,251	0/0:14,0:14:33.09:0,33,365	0/0:17,0:18:44.93:0,45,469	0/1:1,9:10:6.40:181,0,6	1/1:2,11:13:29.98:260,30,0	1/1:2,4:6:12:104,12,0	0/0:2,0:2:6.02:0,6,66	1/1:0,8:8:24:208,24,0	./.	0/0:16,0:16:33.09:0,33,365	1/1:1,8:8:24:208,24,0	1/1:0,10:10:29.99:260,30,0	1/1:0,10:10:29.99:260,30,0
chr10	38681527	.	C	CGG	1611.11	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=2.696;DP=468;FS=14.990;HRun=3;HaplotypeScore=57.2713;InbreedingCoeff=0.9704;MQ=82.76;MQ0=0;MQRankSum=-0.714;QD=39.30;ReadPosRankSum=-0.130;VQSLOD=2.0535;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:66.20:0,66,903	0/0:3,0:3:9.03:0,9,126	0/0:14,0:14:38.92:0,39,504	0/0:14,0:15:34.90:0,35,447	0/0:12,0:12:33.11:0,33,456	0/0:20,0:20:51.17:0,51,713	0/0:9,0:9:24.08:0,24,336	0/0:29,0:29:78.25:0,78,1071	0/0:18,0:18:54.18:0,54,753	0/0:11,0:11:18.05:0,18,252	0/0:21,0:21:30.06:0,30,393	1/1:2,9:11:21.07:385,21,0	0/0:12,0:12:33.11:0,33,461	0/0:13,0:13:39.10:0,39,512	0/0:15,0:15:42.14:0,42,587	0/0:12,0:12:33.11:0,33,461	0/0:37,0:37:93.29:0,93,1281	0/0:20,0:20:51.15:0,51,695	0/0:22,0:22:60.20:0,60,837	0/0:16,0:16:21.06:0,21,284	0/0:35,0:35:96.32:0,96,1341	0/0:12,0:12:24.07:0,24,318	1/1:7,10:17:39.09:654,39,0	1/1:0,13:13:39.13:715,39,0	0/0:10,0:10:24.08:0,24,335	0/0:12,0:12:24.08:0,24,335	0/0:24,0:24:69.23:0,69,965	0/0:10,0:10:30.10:0,30,417
chr10	38683053	.	CTT	C	2177.13	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=11.430;DP=633;FS=0.000;HRun=6;HaplotypeScore=76.3154;InbreedingCoeff=0.9981;MQ=63.91;MQ0=0;MQRankSum=0.542;QD=32.99;ReadPosRankSum=1.851;VQSLOD=3.3442;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:99:0,99,1654	0/0:18,0:18:48.14:0,48,782	0/0:14,0:14:36.12:0,36,561	0/0:13,0:10:27:0,27,341	0/0:32,0:32:87.29:0,87,1538	0/0:17,0:17:51.17:0,51,918	0/0:15,0:15:42.14:0,42,729	0/0:31,0:31:81.27:0,81,1426	0/0:20,0:20:60.20:0,60,1053	0/0:28,0:28:75.26:0,75,1350	0/0:24,0:24:69.22:0,69,1189	1/1:0,26:26:72.24:960,72,0	0/0:28,0:28:84.27:0,84,1455	0/0:15,0:15:45.15:0,45,808	0/0:27,0:27:78.23:0,78,1296	0/0:27,0:27:81.24:0,81,1348	0/0:25,0:25:75.26:0,75,1350	0/0:17,0:17:51.12:0,51,821	0/0:18,0:18:48.16:0,48,864	0/0:32,0:32:87.27:0,87,1483	0/0:30,0:30:90.21:0,90,1446	0/0:19,0:19:54.17:0,54,944	1/1:1,22:23:60.19:800,60,0	1/1:1,16:17:42.14:560,42,0	0/0:28,0:28:84.24:0,84,1393	0/0:28,0:28:78.24:0,78,1323	0/0:20,0:20:60.21:0,60,1075	0/0:8,0:8:21.07:0,21,378
chr10	38685492	.	T	TAA	770.86	PASS	AB=0.967;AC=8;AF=0.143;AN=56;BaseQRankSum=1.744;DP=548;FS=9.318;HRun=14;HaplotypeScore=81.1993;InbreedingCoeff=0.7017;MQ=67.27;MQ0=1;MQRankSum=-0.553;QD=8.76;ReadPosRankSum=0.914;VQSLOD=1.2690;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:68.27:0,68,569	0/0:5,0:6:8.93:0,9,113	0/0:16,0:13:15.97:0,16,122	0/1:7,0:6:0.01:0,0,0	0/0:16,0:20:27.87:0,28,248	0/0:17,0:18:29.86:0,30,289	0/0:25,0:25:47.54:0,48,401	0/0:32,0:32:23.39:0,23,349	0/0:14,0:14:38.93:0,39,322	0/0:27,0:27:34.46:0,34,316	0/0:12,0:16:4.07:0,4,165	1/1:5,13:21:27.67:298,28,0	0/0:10,0:11:23.79:0,24,197	0/0:18,0:18:26.34:0,26,255	0/0:21,0:21:50.85:0,51,419	0/0:25,0:26:53.43:0,53,437	0/0:15,0:17:23.68:0,24,233	0/0:13,0:15:20.40:0,20,216	0/0:19,0:21:32.08:0,32,296	0/0:19,0:22:32.44:0,32,302	0/0:26,0:27:27.49:0,27,247	0/0:10,0:14:2.71:0,3,147	1/1:5,11:18:13.85:151,14,0	1/1:3,23:28:35.48:441,35,0	0/0:18,0:21:22.29:0,22,261	0/1:13,0:14:25.02:25,0,124	0/0:27,0:27:65.69:0,66,538	0/0:12,0:12:14.65:0,15,125
chr10	38685893	.	GTA	G	178.91	PASS	AB=0.927;AC=10;AF=0.192;AN=52;BaseQRankSum=3.463;DP=242;FS=0.000;HRun=0;HaplotypeScore=30.5450;InbreedingCoeff=0.4038;MQ=65.35;MQ0=0;MQRankSum=-0.307;QD=3.58;ReadPosRankSum=1.633;VQSLOD=1.3225;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:24.06:0,24,363	0/0:3,0:3:6.02:0,6,81	0/0:3,0:2:0.89:0,1,2	./.	0/0:12,0:11:21.07:0,21,319	0/0:16,1:17:8.20:0,8,583	0/0:10,0:10:15.05:0,15,237	0/0:19,0:19:35.79:0,36,546	0/1:7,0:7:3.65:4,0,269	0/0:8,0:8:24.07:0,24,346	0/0:6,0:6:12.04:0,12,193	1/1:0,4:4:12.04:148,12,0	0/0:6,0:6:18.01:0,18,242	0/0:4,0:4:6.02:0,6,94	0/1:5,1:6:24.88:25,0,135	0/0:2,0:2:6.02:0,6,98	0/0:22,1:23:17.22:0,17,738	0/1:15,1:16:0.81:1,0,474	0/0:8,0:8:21.06:0,21,313	0/0:8,0:8:12.04:0,12,193	0/0:6,0:6:18.05:0,18,252	./.	1/1:1,1:3:8.86:87,9,0	1/1:1,3:4:3.01:37,3,0	0/1:9,1:10:9.89:10,0,332	0/0:9,0:9:15.05:0,15,244	0/0:7,0:7:15.05:0,15,241	0/0:22,0:22:33.11:0,33,534
chr10	38686847	.	TCA	T	1967.98	PASS	AB=0.731;AC=40;AF=0.800;AN=50;BaseQRankSum=1.048;DP=597;FS=14.593;HRun=0;HaplotypeScore=89.5706;InbreedingCoeff=0.4027;MQ=69.37;MQ0=5;MQRankSum=-0.302;QD=4.29;ReadPosRankSum=2.880;VQSLOD=1.2560;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:31:5.68:28,6,0	0/1:4,5:9:8.90:115,0,9	0/0:28,0:22:0:0,0,0	./.	./.	1/1:12,0:17:7.72:34,8,0	1/1:23,0:32:8.42:42,8,0	0/0:22,0:20:2.99:0,3,36	0/1:21,5:27:23.63:156,0,24	1/1:7,0:12:11.36:56,11,0	1/1:6,0:13:5.68:28,6,0	1/1:14,5:19:6.44:65,6,0	1/1:16,6:23:26.86:261,27,0	1/1:17,6:24:11.82:99,12,0	1/1:17,6:24:14.87:144,15,0	1/1:16,5:22:17.88:177,18,0	1/1:12,9:21:18.05:195,18,0	1/1:12,0:17:14.20:70,14,0	1/1:15,0:17:6.62:29,7,0	0/0:14,0:14:4.38:0,4,25	1/1:40,0:46:10.25:54,10,0	1/1:16,6:24:17.71:152,18,0	1/1:6,3:9:1.24:29,1,0	1/1:29,5:37:26.57:236,27,0	0/0:12,0:21:17.97:0,18,164	1/1:10,0:14:4.88:20,5,0	1/1:13,0:18:22.68:111,23,0	./.
chr10	38688295	.	GTT	G	2460.06	PASS	AB=0.742;AC=30;AF=0.536;AN=56;BaseQRankSum=2.502;DP=663;FS=3.479;HRun=16;HaplotypeScore=97.7221;InbreedingCoeff=0.5797;MQ=72.35;MQ0=15;MQRankSum=0.831;QD=5.97;ReadPosRankSum=5.598;VQSLOD=0.2821;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:30:72.07:0,72,811	0/1:1,2:7:3.39:48,0,3	0/1:38,0:24:34.64:35,0,55	0/1:45,0:22:4:4,0,72	1/1:9,14:25:5.33:282,5,0	0/0:17,0:17:41.47:0,41,493	0/0:20,0:25:38.39:0,38,396	0/0:14,1:24:11.28:0,11,170	1/1:10,14:27:11.26:211,11,0	0/0:24,0:28:42.51:0,43,406	0/0:16,0:16:35.54:0,36,376	1/1:9,0:19:16.21:70,16,0	1/1:3,12:15:7.44:219,7,0	1/1:8,13:22:31.97:249,32,0	1/1:8,12:20:17.57:179,18,0	1/1:5,18:24:33.83:306,34,0	1/1:9,17:27:23.72:284,24,0	0/0:21,0:23:55.55:0,56,580	0/1:15,2:22:20.83:21,0,123	0/0:12,2:28:10.17:0,10,280	0/1:2,1:9:4.22:4,0,100	1/1:4,10:15:23.79:242,24,0	1/1:6,0:19:26.96:117,27,0	1/1:3,1:21:35.70:164,36,0	1/1:9,10:19:23.68:200,24,0	0/0:17,0:37:63.75:0,64,349	0/1:13,3:32:28.84:29,0,140	0/0:12,1:22:10.17:0,10,169
chr10	38688477	.	TAGGAAA	T	2643.03	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.874;DP=641;FS=1.986;HRun=0;HaplotypeScore=131.0018;InbreedingCoeff=0.9883;MQ=81.54;MQ0=0;MQRankSum=-9.085;QD=55.06;ReadPosRankSum=0.673;VQSLOD=3.6722;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,114,3860	0/0:16,0:16:45.15:0,45,1509	0/0:23,0:23:50.27:0,50,1420	0/0:17,0:16:35.07:0,35,1037	0/0:25,0:25:75.26:0,75,2639	0/0:24,0:23:72.23:0,72,2375	0/0:12,0:12:36.12:0,36,1195	0/0:24,0:24:69.23:0,69,2230	0/0:29,0:29:84.27:0,84,2727	0/0:24,0:24:69.21:0,69,2162	0/0:25,0:25:75.26:0,75,2592	1/1:0,11:11:30.10:707,30,0	0/0:17,0:17:51.18:0,51,1779	0/0:17,0:17:51.15:0,51,1595	0/0:21,0:21:60.21:0,60,2128	0/0:23,0:23:63.20:0,63,2103	0/0:38,0:38:99:0,108,3812	0/0:19,0:19:57.15:0,57,1798	0/0:23,0:23:69.22:0,69,2220	0/0:25,0:25:72.25:0,72,2478	0/0:23,0:23:66.22:0,66,2257	0/0:26,0:26:75.26:0,75,2588	1/1:1,29:30:77.97:1793,78,0	1/1:0,7:7:12.04:283,12,0	0/0:31,0:31:90.31:0,90,3180	0/0:30,0:30:90.30:0,90,3054	0/0:33,0:33:96.29:0,96,3136	0/0:9,0:9:27.09:0,27,925
chr10	38693215	.	T	TGTC	2650.67	PASS	AB=0.966;AC=19;AF=0.339;AN=56;BaseQRankSum=13.089;DP=785;FS=20.031;HRun=0;HaplotypeScore=142.2510;InbreedingCoeff=0.9234;MQ=60.86;MQ0=4;MQRankSum=-13.258;QD=10.56;ReadPosRankSum=-7.265;VQSLOD=0.1507;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:61.10:0,61,992	1/1:9,1:10:24.03:310,24,0	0/0:28,0:22:35.64:0,36,385	0/0:37,0:28:65.05:0,65,722	1/1:25,1:26:11.35:159,11,0	0/0:27,0:27:66.12:0,66,861	0/0:22,0:22:65.84:0,66,632	0/0:46,0:46:93.15:0,93,1034	1/1:30,0:30:19.27:229,19,0	0/0:36,0:36:99:0,105,1352	0/0:21,0:21:57.12:0,57,764	0/0:24,0:24:63.11:0,63,800	1/1:24,0:24:24.57:268,25,0	1/1:27,1:28:29.51:288,30,0	1/1:33,0:33:54.55:592,55,0	1/1:28,0:28:32.95:378,33,0	0/1:27,1:28:8:234,0,8	0/0:31,0:31:93.09:0,93,1199	0/0:20,0:17:44.96:0,45,472	0/0:19,0:19:56.85:0,57,729	0/0:40,0:40:99:0,102,1162	1/1:17,0:18:27.23:199,27,0	0/0:27,0:27:68.96:0,69,848	0/0:36,0:36:99:0,102,1276	1/1:26,0:26:20.94:207,21,0	0/0:40,0:40:99:0,108,1351	0/0:30,0:30:84.43:0,84,1002	0/0:14,0:14:39.51:0,40,468
chr10	38693222	.	G	GTCGTCA	8229.87	PASS	AB=0.540;AC=19;AF=0.339;AN=56;BaseQRankSum=-0.084;DP=800;FS=21.345;HRun=0;HaplotypeScore=161.7612;InbreedingCoeff=0.9184;MQ=59.87;MQ0=6;MQRankSum=-13.725;QD=30.59;ReadPosRankSum=-4.182;VQSLOD=2.4676;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:60.97:0,61,1406	1/1:1,10:12:24.06:695,24,0	0/0:26,0:18:43.97:0,44,501	0/0:33,0:24:65.05:0,65,755	1/1:2,22:26:20.40:499,20,0	0/0:27,0:27:75.08:0,75,1309	0/0:22,0:23:68.84:0,69,779	0/0:44,0:44:99:0,111,1407	1/1:1,30:33:26.98:639,27,0	0/0:38,0:38:99:0,114,1982	0/0:22,0:22:60.10:0,60,1145	0/0:25,0:25:69.12:0,69,1208	1/1:1,23:27:27.09:821,27,0	1/1:4,18:24:30.10:886,30,0	1/1:1,33:34:57.20:1770,57,0	1/1:1,28:33:32.85:1037,33,0	0/1:4,19:27:24.26:431,0,24	0/0:32,0:32:93.10:0,93,1738	0/0:20,0:17:44.96:0,45,584	0/0:19,0:19:57.14:0,57,1080	0/0:37,0:38:99:0,105,1606	1/1:0,20:22:29.94:818,30,0	0/0:28,0:28:77.94:0,78,1296	0/0:36,0:36:99:0,108,1874	1/1:2,26:31:21.07:634,21,0	0/0:41,0:42:99:0,117,1918	0/0:32,0:32:96.02:0,96,1546	0/0:13,0:14:41.94:0,42,663
chr10	38693382	.	CTGT	C	3606.84	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=2.233;DP=725;FS=6.423;HRun=0;HaplotypeScore=128.0489;InbreedingCoeff=0.9756;MQ=62.03;MQ0=5;MQRankSum=3.870;QD=18.59;ReadPosRankSum=3.033;VQSLOD=2.8532;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:84.28:0,84,1479	1/1:4,9:13:27.09:375,27,0	0/0:31,0:15:6.02:0,6,77	0/0:36,0:24:12.98:0,13,173	1/1:6,7:13:18.06:241,18,0	0/0:40,0:40:78.24:0,78,1392	0/0:20,0:20:42.14:0,42,727	0/0:43,0:42:63.04:0,63,704	1/1:8,11:19:27.09:372,27,0	0/0:42,0:42:93.30:0,93,1701	0/0:23,0:23:45.14:0,45,777	0/0:19,0:19:29.84:0,30,221	1/1:7,12:19:21.06:292,21,0	1/1:3,9:12:21.07:292,21,0	1/1:8,17:25:30.10:416,30,0	1/1:9,15:24:21.07:292,21,0	1/1:7,29:35:51.17:706,51,0	0/0:24,0:24:51.15:0,51,923	0/0:23,0:23:35.99:0,36,359	0/0:22,0:32:38.39:0,38,346	0/0:23,0:23:32.89:0,33,301	1/1:11,9:20:27.09:371,27,0	0/0:29,0:29:48.38:0,48,406	0/0:40,0:40:68.35:0,68,597	1/1:3,10:13:18.06:250,18,0	0/0:14,0:33:71.51:0,72,764	0/0:11,0:25:27.08:0,27,335	0/0:12,0:12:26.94:0,27,253
chr10	38693410	.	TG	T	3533.58	PASS	AB=0.987;AC=11;AF=0.196;AN=56;BaseQRankSum=6.487;DP=687;FS=4.775;HRun=2;HaplotypeScore=98.1322;InbreedingCoeff=0.4318;MQ=56.01;MQ0=10;MQRankSum=-0.565;QD=15.64;ReadPosRankSum=-0.526;VQSLOD=3.2976;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:90.30:0,90,1311	0/0:15,0:15:32.05:0,32,275	0/0:26,0:9:26.95:0,27,351	0/0:33,1:14:18.60:0,19,364	0/0:17,0:17:41.31:0,41,444	0/0:31,0:31:90.30:0,90,1315	0/0:20,0:20:55.72:0,56,753	0/1:48,0:45:99:131,0,895	0/0:20,0:20:43.48:0,43,409	0/0:38,0:38:99:0,111,1612	0/0:19,0:19:54.15:0,54,748	1/1:0,13:13:36.12:464,36,0	0/0:14,0:14:18.49:0,18,94	0/0:14,0:14:30.51:0,31,268	0/0:23,0:23:40.26:0,40,334	0/0:23,0:23:39.61:0,40,381	0/0:37,0:37:62.10:0,62,473	0/0:22,0:22:66.22:0,66,972	0/1:19,0:19:99:152,0,169	0/0:23,0:21:30.79:0,31,495	0/1:24,0:24:99:106,0,464	0/0:15,0:15:35.37:0,35,240	1/1:2,26:28:74.73:941,75,0	1/1:5,41:45:99:1561,123,0	0/0:15,0:15:28.37:0,28,257	0/1:34,0:34:99:122,0,804	0/0:23,0:23:47.96:0,48,585	0/1:13,1:14:57.24:57,0,228
chr10	38693950	.	AGT	A	414	PASS	AB=0.845;AC=19;AF=0.432;AN=44;BaseQRankSum=-0.158;DP=260;FS=0.000;HRun=0;HaplotypeScore=48.1100;InbreedingCoeff=0.1193;MQ=58.98;MQ0=21;MQRankSum=0.337;QD=3.34;ReadPosRankSum=-0.089;VQSLOD=1.6279;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:14,2:16:11.74:12,0,193	0/0:5,0:5:6:0,6,52	./.	./.	0/0:7,0:6:2.99:0,3,24	1/1:4,0:5:5.21:22,5,0	0/1:9,7:18:20.91:167,0,21	0/1:6,0:6:0:0,0,0	./.	0/1:14,1:14:38.37:42,0,38	0/1:9,3:12:50.21:50,0,109	1/1:3,0:7:8.52:42,9,0	./.	0/0:5,0:6:3:0,3,26	0/0:5,0:7:2.96:0,3,26	0/0:2,0:8:21:0,21,183	0/0:9,0:10:8.67:0,9,51	0/1:2,3:5:40.81:83,0,41	./.	./.	1/1:11,0:16:2.84:14,3,0	0/0:5,0:5:6.01:0,6,57	0/0:2,0:4:0:0,0,0	1/1:5,0:7:5.68:28,6,0	0/0:4,0:4:3.01:0,3,40	0/1:6,0:6:8.04:8,0,38	1/1:3,0:8:11.52:68,12,0	1/1:3,0:3:2.84:14,3,0
chr10	38694465	.	TTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	T	4978.68	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=5.953;DP=608;FS=4.899;HRun=0;HaplotypeScore=483.1819;InbreedingCoeff=0.8170;MQ=62.68;MQ0=9;MQRankSum=-5.345;QD=34.34;ReadPosRankSum=1.922;VQSLOD=1.4188;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:71.43:0,71,3810	1/1:9,1:9:3.01:286,3,0	0/0:17,0:8:8.99:0,9,273	0/0:28,0:16:14.73:0,15,412	1/1:13,0:13:6.90:101,7,0	0/0:18,0:18:39.60:0,40,3126	0/0:25,0:25:40.01:0,40,3106	0/0:50,0:49:56.78:0,57,2982	1/1:11,7:18:6.01:573,6,0	0/0:26,0:26:43.70:0,44,2364	0/0:11,0:11:15.05:0,15,962	0/0:22,0:22:27.70:0,28,2005	1/1:10,4:14:6.02:573,6,0	1/1:14,8:22:15.05:1432,15,0	1/1:15,4:19:6.01:573,6,0	1/1:12,3:15:9.03:860,9,0	1/1:15,7:22:3.01:287,3,0	0/0:18,0:18:36.12:0,36,2926	0/0:20,0:19:30.10:0,30,1536	0/0:17,0:17:18.51:0,19,811	0/0:31,0:30:39.12:0,39,2866	1/1:8,4:12:4.92:294,5,0	0/0:20,0:20:15.02:0,15,255	0/0:38,0:38:73.95:0,74,6011	0/0:16,0:16:12.51:0,13,925	0/0:29,0:28:60.20:0,60,4793	0/0:20,0:20:30.10:0,30,2766	0/0:13,0:11:15.01:0,15,361
chr10	38701731	.	AG	A	14268.58	PASS	AB=0.917;AC=35;AF=0.625;AN=56;BaseQRankSum=13.231;DP=601;FS=1.383;HRun=1;HaplotypeScore=63.9779;InbreedingCoeff=0.9266;MQ=75.17;MQ0=0;MQRankSum=-1.700;QD=36.68;ReadPosRankSum=1.353;VQSLOD=5.3105;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:84.25:0,84,1294	1/1:0,14:14:39.13:545,39,0	0/0:12,1:13:26.88:0,27,319	0/1:10,1:11:12.97:13,0,155	1/1:0,27:27:78.09:1003,78,0	0/0:29,0:28:87.27:0,87,1341	0/0:18,0:18:54.18:0,54,861	1/1:0,27:27:81.25:1099,81,0	1/1:0,26:26:69.23:964,69,0	0/0:26,0:26:78.27:0,78,1246	0/0:25,0:25:75.20:0,75,1090	0/0:12,0:12:36.12:0,36,573	1/1:0,26:26:69.23:965,69,0	1/1:0,7:7:21.07:293,21,0	1/1:0,24:24:57.19:797,57,0	1/1:0,25:25:57.19:797,57,0	1/1:0,21:21:57.19:797,57,0	0/0:21,0:21:60.20:0,60,959	1/1:0,23:23:69.23:962,69,0	1/1:0,21:21:57.19:797,57,0	1/1:0,14:14:42.14:587,42,0	1/1:0,19:19:48.16:671,48,0	0/0:23,0:23:66.22:0,66,1052	0/0:17,0:16:51.14:0,51,767	1/1:0,24:24:60.20:839,60,0	1/1:1,34:35:57.32:1338,57,0	1/1:0,35:35:99:1423,102,0	1/1:0,10:10:27.09:377,27,0
chr10	38702835	.	G	GAAA	6376.26	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=6.488;DP=522;FS=17.519;HRun=15;HaplotypeScore=171.7553;InbreedingCoeff=0.9033;MQ=74.27;MQ0=0;MQRankSum=-5.966;QD=16.69;ReadPosRankSum=-3.545;VQSLOD=0.7721;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:32:17.64:0,18,453	1/1:4,0:3:3.01:37,3,0	0/0:26,0:20:17.32:0,17,209	0/0:22,0:17:7.70:0,8,40	1/1:24,0:23:28.13:337,28,0	1/1:17,6:30:54.72:611,55,0	1/1:3,11:17:13.27:178,13,0	1/1:25,0:23:38.16:527,38,0	1/1:18,0:16:15.05:218,15,0	0/0:21,0:23:21.65:0,22,220	0/0:16,0:17:18.23:0,18,147	1/1:12,3:16:38:442,38,0	1/1:14,0:14:15.04:198,15,0	1/1:21,0:19:23.07:246,23,0	1/1:15,0:14:26.10:323,26,0	1/1:15,0:15:29.13:389,29,0	1/1:18,0:16:18.01:239,18,0	0/0:20,0:19:32.50:0,32,310	1/1:19,0:17:24.05:317,24,0	1/1:19,0:19:24.05:328,24,0	1/1:12,0:12:21.03:261,21,0	1/1:13,0:13:21.06:274,21,0	1/1:15,2:18:25.59:335,26,0	1/1:9,12:22:12.49:177,12,0	1/1:16,0:16:21.07:301,21,0	1/1:27,0:26:18.15:385,18,0	1/1:11,0:11:12.02:154,12,0	1/1:8,0:8:9:100,9,0
chr10	38702928	.	ATGTCTGGCTAGAGTT	A	5488.59	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=11.287;DP=587;FS=3.462;HRun=0;HaplotypeScore=232.8569;InbreedingCoeff=0.9954;MQ=83.44;MQ0=0;MQRankSum=-11.105;QD=59.02;ReadPosRankSum=0.927;VQSLOD=4.6633;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,150,9918	0/0:9,0:9:27.09:0,27,1724	0/0:23,0:23:62.23:0,62,3456	0/0:16,0:16:45.11:0,45,2325	0/0:29,0:29:81.26:0,81,5078	1/1:0,18:18:39.13:1706,39,0	1/1:4,18:21:33.11:1274,33,0	0/0:20,0:20:48.14:0,48,2438	0/0:16,0:16:45.15:0,45,3174	0/0:24,0:24:69.22:0,69,3720	0/0:23,0:23:63.19:0,63,4313	1/1:0,12:12:27.09:1195,27,0	0/0:21,0:21:63.19:0,63,3882	0/0:13,0:13:39.13:0,39,2602	0/0:17,0:17:51.18:0,51,3458	0/0:6,0:6:18.06:0,18,1273	0/0:39,0:39:99:0,102,7251	0/0:18,0:18:54.19:0,54,3914	0/0:11,0:11:27.07:0,27,1634	0/0:29,0:29:84.26:0,84,5114	0/0:36,0:36:99:0,99,6435	0/0:15,0:15:45.15:0,45,2613	1/1:0,19:19:22.43:704,22,0	1/1:0,22:22:26.88:610,27,0	0/0:19,0:19:51.16:0,51,3239	0/0:28,0:28:84.26:0,84,4887	0/0:23,0:23:69.22:0,69,4307	0/0:7,0:7:21.07:0,21,1559
chr10	38704364	.	G	GC	25698.83	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-9.122;DP=835;FS=31.515;HRun=2;HaplotypeScore=74.3227;InbreedingCoeff=0.9998;MQ=66.57;MQ0=0;MQRankSum=-7.013;QD=38.70;ReadPosRankSum=1.808;VQSLOD=2.6327;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,138,1645	1/1:1,11:12:30.10:431,30,0	0/0:25,0:25:69.05:0,69,814	0/0:12,0:12:33.10:0,33,397	1/1:0,21:21:60.20:856,60,0	1/1:2,22:24:63.14:881,63,0	1/1:0,33:33:87.26:1229,87,0	1/1:3,38:41:99:1606,114,0	1/1:2,24:26:63.07:836,63,0	0/0:27,0:27:75.20:0,75,889	0/0:20,0:20:51.13:0,51,615	1/1:2,25:27:72.16:989,72,0	1/1:3,30:33:78.26:1115,78,0	1/1:1,41:42:99:1639,114,0	1/1:0,34:34:87.24:1227,87,0	1/1:1,33:34:93.31:1338,93,0	1/1:0,44:44:99:1728,120,0	0/0:39,0:39:99:0,114,1413	1/1:0,23:23:69.23:993,69,0	1/1:1,29:30:90.30:1288,90,0	1/1:0,29:29:78.26:1123,78,0	1/1:0,41:41:99:1547,111,0	1/1:1,26:27:78.26:1109,78,0	1/1:1,35:36:93.22:1291,93,0	1/1:0,25:25:72.24:1036,72,0	1/1:0,38:38:99:1583,114,0	1/1:0,33:33:96.32:1378,96,0	1/1:0,11:11:33.11:475,33,0
chr10	38704459	.	GA	G	738.86	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.010;DP=761;FS=1.675;HRun=3;HaplotypeScore=76.9566;InbreedingCoeff=0.9986;MQ=76.30;MQ0=0;MQRankSum=-3.128;QD=26.39;ReadPosRankSum=-0.785;VQSLOD=2.7823;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:57:99:0,168,2249	0/0:14,0:14:42.11:0,42,582	0/0:24,0:24:61.12:0,61,807	0/0:32,0:32:73.48:0,73,995	1/1:4,24:28:69.20:834,69,0	0/0:22,0:22:63.20:0,63,887	0/0:32,0:32:96.32:0,96,1380	0/0:33,0:33:93.29:0,93,1278	0/0:28,0:28:69.23:0,69,977	0/0:26,0:26:78.24:0,78,1102	0/0:14,0:14:27.08:0,27,369	0/0:21,0:21:57.19:0,57,820	0/0:29,0:29:78.25:0,78,1099	0/0:27,0:27:66.22:0,66,934	0/0:33,0:33:90.29:0,90,1260	0/0:33,0:33:99:0,99,1410	0/0:39,0:39:99:0,108,1536	0/0:29,0:29:87.29:0,87,1245	0/0:16,0:16:45.14:0,45,615	0/0:14,0:14:42.13:0,42,585	0/0:44,0:44:99:0,123,1749	0/0:15,0:15:33.11:0,33,468	0/0:17,0:17:48.13:0,48,667	0/0:36,0:36:99:0,105,1433	0/0:30,0:30:81.27:0,81,1164	0/0:30,0:30:84.28:0,84,1208	0/0:25,0:25:72.20:0,72,980	0/0:13,0:13:39.13:0,39,552
chr10	38707898	.	TAA	T	1091.52	PASS	AB=0.713;AC=17;AF=0.304;AN=56;BaseQRankSum=4.711;DP=440;FS=1.815;HRun=17;HaplotypeScore=66.7594;InbreedingCoeff=0.6751;MQ=58.71;MQ0=15;MQRankSum=1.994;QD=8.21;ReadPosRankSum=4.145;VQSLOD=0.6277;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:29:58.52:0,59,602	1/1:0,3:3:8.98:71,9,0	0/0:14,0:7:14.96:0,15,156	0/0:10,0:6:12.02:0,12,121	1/1:5,10:19:22.12:152,22,0	0/0:11,0:24:35.90:0,36,333	0/0:4,0:12:17.38:0,17,154	0/0:18,0:17:32.97:0,33,353	1/1:5,4:9:2.96:24,3,0	0/0:16,0:20:38.42:0,38,419	0/0:21,1:26:26.10:0,26,463	0/0:6,0:14:11.98:0,12,103	0/1:5,3:10:24.48:56,0,24	0/1:6,5:10:0.95:101,0,1	1/1:6,7:13:14.64:118,15,0	1/1:2,9:14:29.31:213,29,0	1/1:3,18:21:32.77:261,33,0	0/0:17,0:21:39.56:0,40,399	0/0:12,0:10:18.01:0,18,204	0/0:19,0:22:43.09:0,43,406	0/0:13,1:16:6.77:0,7,292	0/0:1,1:1:0:0,0,0	0/0:3,0:11:20.95:0,21,189	0/0:7,0:11:3.89:0,4,32	1/1:7,14:21:26.65:250,27,0	0/0:17,0:23:51.43:0,51,486	0/0:16,0:16:32.25:0,32,320	0/1:8,2:6:33.13:33,0,70
chr10	38709140	.	CCACCCACACACACCCACACACACA	C	2599.70	PASS	AB=1.000;AC=10;AF=0.179;AN=56;BaseQRankSum=2.107;DP=528;FS=9.801;HRun=0;HaplotypeScore=272.3746;InbreedingCoeff=0.6755;MQ=59.79;MQ0=26;MQRankSum=-3.975;QD=20.47;ReadPosRankSum=-0.810;VQSLOD=0.9244;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:32:78.27:0,78,6245	0/0:5,0:5:15.05:0,15,1002	0/0:49,0:7:8.67:0,9,86	0/1:49,0:17:29.56:30,0,366	0/0:13,0:13:27.09:0,27,1318	1/1:6,8:14:3.01:190,3,0	1/1:17,0:17:27.03:522,27,0	0/0:23,0:22:30.01:0,30,610	0/0:19,0:17:45.15:0,45,3064	0/0:15,0:14:30.10:0,30,2386	0/0:19,0:19:42.13:0,42,2660	1/1:6,11:16:14.74:877,15,0	0/0:16,0:16:24.55:0,25,1500	0/0:11,0:10:21.07:0,21,1193	0/0:12,0:12:24.08:0,24,1445	0/0:11,0:11:24.08:0,24,1648	0/0:22,0:21:48.05:0,48,2718	0/0:15,0:15:39.11:0,39,2824	0/0:19,0:18:30.09:0,30,867	0/0:20,0:20:35.66:0,36,909	0/0:39,0:38:24.47:0,24,542	0/0:11,0:11:24.08:0,24,1850	1/1:4,11:15:18.01:967,18,0	0/1:14,0:14:99:172,0,136	0/0:8,0:8:18.06:0,18,1124	0/0:15,0:14:32.67:0,33,1323	0/0:18,0:18:35.46:0,35,1446	0/0:8,0:8:12.03:0,12,308
chr10	38709157	.	CACA	C	180.37	PASS	AB=0.943;AC=8;AF=0.143;AN=56;BaseQRankSum=7.488;DP=601;FS=0.000;HRun=0;HaplotypeScore=126.1486;InbreedingCoeff=0.2916;MQ=57.46;MQ0=44;MQRankSum=-4.750;QD=0.92;ReadPosRankSum=-0.308;VQSLOD=1.6004;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:39:99:0,111,2582	0/0:7,0:7:21.07:0,21,463	0/1:61,0:10:22.24:22,0,154	0/1:81,0:26:52.95:53,0,421	0/0:18,0:16:44.69:0,45,812	1/1:10,0:10:2.98:21,3,0	0/1:12,5:16:26.29:26,0,116	0/0:28,0:25:12.55:0,13,466	0/0:20,0:18:45.15:0,45,1067	0/0:20,0:18:47.81:0,48,1086	0/0:18,0:18:51.17:0,51,1123	1/1:12,0:11:14.79:109,15,0	0/0:15,0:14:36.12:0,36,824	0/0:8,0:7:21.07:0,21,481	0/0:10,0:10:27.09:0,27,613	0/0:12,0:12:33.11:0,33,771	0/0:23,0:20:54.18:0,54,1204	0/0:16,0:16:48.16:0,48,1084	0/0:29,0:21:41.83:0,42,596	0/0:19,0:18:8.16:0,8,306	0/0:42,0:41:27.09:0,27,281	0/0:13,0:13:39.13:0,39,872	0/1:12,0:12:14.17:85,0,14	0/0:14,0:12:1.80:0,2,100	0/0:10,0:10:24.08:0,24,553	0/0:18,0:16:41.24:0,41,468	0/0:17,0:17:39.60:0,40,501	0/0:7,0:7:8.67:0,9,122
chr10	38709159	.	CACA	C	425.14	PASS	AB=0.898;AC=11;AF=0.196;AN=56;BaseQRankSum=6.529;DP=594;FS=3.646;HRun=0;HaplotypeScore=125.9512;InbreedingCoeff=0.5789;MQ=58.47;MQ0=45;MQRankSum=-2.827;QD=2.08;ReadPosRankSum=-1.048;VQSLOD=2.4425;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:39:99:0,111,2612	0/0:7,0:7:21.07:0,21,467	0/1:63,0:12:32.91:33,0,138	0/1:79,0:27:15.81:16,0,421	0/0:15,0:13:38.68:0,39,749	1/1:8,0:8:2.98:21,3,0	1/1:9,5:13:23.90:262,24,0	0/0:26,0:23:29.11:0,29,470	0/0:20,0:18:45.15:0,45,1074	0/0:20,0:18:47.81:0,48,1076	0/0:18,0:18:51.16:0,51,1110	1/1:12,0:11:8.27:79,8,0	0/0:15,0:14:33.11:0,33,796	0/0:10,0:9:24.08:0,24,518	0/0:10,0:10:27.09:0,27,612	0/0:13,0:13:33.11:0,33,770	0/0:23,0:20:57.15:0,57,1237	0/0:16,0:16:48.16:0,48,1084	0/0:29,0:21:41.84:0,42,620	0/0:19,0:18:27.80:0,28,330	0/0:44,0:42:27.09:0,27,283	0/0:12,0:12:36.12:0,36,832	1/1:12,0:12:14.38:105,14,0	0/1:7,3:10:64.33:68,0,64	0/0:10,0:10:24.08:0,24,555	0/0:18,0:16:44.34:0,44,511	0/0:17,0:17:41.53:0,42,533	0/0:7,0:7:8.66:0,9,122
chr10	38709168	.	CCACACA	C	1431.90	PASS	AB=0.809;AC=11;AF=0.196;AN=56;BaseQRankSum=4.736;DP=598;FS=35.460;HRun=0;HaplotypeScore=145.0248;InbreedingCoeff=-0.1053;MQ=61.15;MQ0=36;MQRankSum=-4.055;QD=7.27;ReadPosRankSum=-1.693;VQSLOD=1.2709;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:40:99:0,105,2953	0/0:8,0:8:15.05:0,15,385	0/0:62,0:16:11.98:0,12,294	0/0:85,0:29:44.55:0,45,696	0/0:14,0:12:4.77:0,5,423	1/1:8,0:8:3.01:39,3,0	0/0:15,0:14:8.50:0,8,75	0/1:10,14:21:99:271,0,102	0/0:21,0:19:15.53:0,16,835	0/0:20,0:18:48.16:0,48,1497	0/0:15,0:15:39.13:0,39,1185	0/1:14,0:13:67:135,0,67	0/0:13,0:12:32.95:0,33,598	0/0:9,0:8:19.62:0,20,430	0/0:10,0:10:17.87:0,18,386	0/0:12,0:12:26.44:0,26,565	0/0:22,0:20:26.53:0,27,847	0/0:18,0:18:51.13:0,51,1342	0/1:17,10:20:99:287,0,176	0/1:13,5:17:97.07:97,0,161	0/1:28,19:45:19.06:19,0,127	0/0:14,0:14:33.01:0,33,641	0/1:13,0:13:31.35:177,0,31	0/0:11,0:10:8.67:0,9,170	0/0:8,0:7:18.06:0,18,418	0/1:11,8:18:99:282,0,272	0/1:11,7:18:99:216,0,263	0/1:9,0:9:54.88:55,0,56
chr10	38709180	.	A	ACC	775.85	PASS	AB=0.916;AC=7;AF=0.125;AN=56;BaseQRankSum=6.213;DP=552;FS=0.000;HRun=3;HaplotypeScore=122.1657;InbreedingCoeff=-0.1373;MQ=62.92;MQ0=20;MQRankSum=-3.564;QD=5.46;ReadPosRankSum=-1.625;VQSLOD=-0.5892;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:40:99:0,99,1469	0/0:8,0:8:21.07:0,21,313	0/0:54,0:17:31.55:0,32,393	0/0:71,0:31:20.38:0,20,508	0/0:12,0:11:30.08:0,30,421	0/0:10,0:10:2.98:0,3,21	0/0:13,0:12:12.04:0,12,174	0/1:19,0:16:35.90:36,0,173	0/0:16,0:16:39.03:0,39,482	0/0:22,0:20:48.16:0,48,734	0/0:18,0:18:45.13:0,45,638	0/0:14,0:14:23.93:0,24,261	0/0:11,0:11:27.09:0,27,386	0/0:9,0:9:18.05:0,18,251	0/0:9,0:9:27.01:0,27,356	0/0:14,0:14:39.11:0,39,537	0/0:20,0:18:48.12:0,48,640	0/0:16,0:16:45.15:0,45,676	0/1:22,1:20:99:117,0,168	0/1:12,6:18:99:151,0,168	0/1:38,2:39:31.25:86,0,31	0/0:14,0:14:39.44:0,39,523	0/0:13,0:13:17.89:0,18,150	0/0:15,0:13:14.43:0,14,209	0/0:9,0:8:24.07:0,24,333	0/1:16,1:17:99:158,0,125	0/1:13,4:17:12.39:283,0,12	0/1:8,0:8:67.96:75,0,68
chr10	38709317	.	ATGGATGGATGGATGGATGGATGGGATG	A	722.14	PASS	AB=0.929;AC=15;AF=0.278;AN=54;BaseQRankSum=8.444;DP=482;FS=3.213;HRun=0;HaplotypeScore=368.4380;InbreedingCoeff=0.7463;MQ=37.35;MQ0=18;MQRankSum=-5.833;QD=6.45;ReadPosRankSum=-5.585;VQSLOD=0.1616;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:59.10:0,59,3934	1/1:5,3:8:4.98:146,5,0	./.	0/0:15,0:4:8.62:0,9,107	0/0:12,1:13:0.34:0,0,1	0/0:18,0:18:44.33:0,44,1041	0/0:13,0:13:23.44:0,23,536	0/0:26,0:23:30.27:0,30,1361	1/1:14,1:15:11.62:219,12,0	0/0:21,0:20:57.20:0,57,3139	0/0:18,0:18:36.92:0,37,2197	0/0:17,0:17:44.17:0,44,1461	1/1:17,1:18:14.87:47,15,0	0/1:12,1:13:15.19:58,0,15	1/1:18,3:21:16.82:83,17,0	1/1:11,2:13:12.63:61,13,0	1/1:12,2:12:2.69:268,3,0	0/0:10,0:9:27.05:0,27,1698	0/0:18,0:12:11.60:0,12,1475	0/0:29,0:28:37.71:0,38,2232	0/0:26,0:26:53.03:0,53,3759	1/1:9,0:9:2.93:14,3,0	0/0:17,0:17:12:0,12,1175	0/0:13,0:13:12.04:0,12,508	0/0:30,0:30:47.98:0,48,2396	0/0:27,0:24:46.75:0,47,3849	0/0:23,0:23:46.05:0,46,3962	0/0:6,0:6:12.04:0,12,856
chr10	38709318	.	TGGATGGATGGATGGATGGATG	T	3475.92	PASS	AB=1.000;AC=31;AF=0.574;AN=54;BaseQRankSum=4.167;DP=443;FS=2.889;HRun=0;HaplotypeScore=288.3702;InbreedingCoeff=0.0863;MQ=37.88;MQ0=17;MQRankSum=-6.178;QD=10.16;ReadPosRankSum=-7.288;VQSLOD=0.8706;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:23:90.56:91,0,2300	1/1:6,0:6:7.84:241,8,0	./.	0/0:14,0:4:5.80:0,6,43	0/0:13,0:13:0.08:0,0,0	1/1:13,4:17:18.04:209,18,0	1/1:14,0:13:6.86:123,7,0	0/1:28,0:25:99:524,0,278	1/1:9,0:9:19.48:367,19,0	0/1:21,0:20:74.35:74,0,1371	0/1:18,0:18:6.57:7,0,1196	0/1:17,0:17:99:120,0,305	1/1:10,0:10:18.03:223,18,0	1/1:8,0:8:9.91:113,10,0	1/1:15,0:14:13.63:183,14,0	1/1:10,0:10:16.57:220,17,0	1/1:11,0:10:10.02:331,10,0	0/1:10,0:9:47.07:47,0,947	0/1:16,0:10:83.86:84,0,821	0/1:30,0:29:1.36:1,0,803	0/0:26,0:26:51.18:0,51,2099	1/1:5,0:5:6.69:107,7,0	0/1:17,0:17:99:148,0,386	0/0:13,0:13:6.02:0,6,152	0/1:30,0:30:99:131,0,813	0/1:27,0:24:99:133,0,1982	0/0:23,0:23:17.33:0,17,2209	0/0:6,0:6:9.03:0,9,510
chr10	38709326	.	TGGATGGATGGATG	T	5209.42	PASS	AB=1.000;AC=42;AF=0.750;AN=56;BaseQRankSum=2.106;DP=438;FS=10.455;HRun=0;HaplotypeScore=236.9626;InbreedingCoeff=0.0339;MQ=39.41;MQ0=11;MQRankSum=-6.158;QD=12.99;ReadPosRankSum=-2.644;VQSLOD=2.1911;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:23:99:137,0,1011	1/1:6,0:6:8.35:183,8,0	1/1:5,0:2:4.46:20,4,0	0/0:11,0:3:8.81:0,9,85	0/1:15,0:15:0.21:0,0,0	1/1:12,0:12:21.07:260,21,0	1/1:12,0:11:1.79:67,2,0	1/1:23,0:21:14.15:583,14,0	1/1:13,0:13:32.25:484,32,0	0/1:22,0:21:99:404,0,329	0/1:17,0:17:13.72:14,0,503	1/1:13,4:17:28.30:367,28,0	1/1:12,0:12:26.39:333,26,0	1/1:8,0:8:15.05:185,15,0	1/1:12,0:11:14.33:184,14,0	1/1:13,0:13:25.70:331,26,0	1/1:11,0:10:9.53:210,10,0	0/1:10,0:10:99:116,0,449	0/1:14,0:10:99:121,0,261	0/1:28,0:27:60.60:61,0,69	0/0:26,0:26:38.37:0,38,749	1/1:10,0:10:13.50:183,13,0	1/1:16,1:17:15.56:203,16,0	1/1:10,2:12:6.02:86,6,0	1/1:29,0:29:14.39:247,14,0	0/1:29,0:25:99:380,0,589	0/1:24,0:24:27.27:27,0,682	0/1:6,0:6:23.75:24,0,145
chr10	38709338	.	TG	T	7993.98	PASS	AB=0.533;AC=53;AF=0.946;AN=56;BaseQRankSum=-0.654;DP=404;FS=3.021;HRun=3;HaplotypeScore=162.6778;InbreedingCoeff=0.5828;MQ=36.56;MQ0=7;MQRankSum=0.808;QD=20.44;ReadPosRankSum=2.115;VQSLOD=4.5134;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,16:18:39.59:485,40,0	1/1:3,4:7:12.46:130,12,0	1/1:7,0:2:4.46:20,4,0	0/0:12,1:3:8.81:0,9,85	0/1:2,14:16:0.21:0,0,0	1/1:4,9:13:24.08:296,24,0	1/1:0,13:12:6.86:76,7,0	1/1:2,20:20:57.18:735,57,0	1/1:1,12:13:32.68:388,33,0	1/1:0,19:18:52.41:635,52,0	1/1:1,13:14:17.77:209,18,0	1/1:4,13:17:33.96:390,34,0	1/1:1,11:12:27.03:334,27,0	1/1:1,7:8:15.05:185,15,0	1/1:5,9:13:17.79:222,18,0	1/1:2,12:14:31.04:373,31,0	1/1:3,12:14:18.62:200,19,0	1/1:2,8:10:24.07:288,24,0	1/1:1,12:12:32.97:386,33,0	1/1:1,19:19:12.28:146,12,0	1/1:2,16:18:24.22:291,24,0	1/1:0,11:11:15.26:186,15,0	1/1:2,9:11:15.86:186,16,0	1/1:2,6:8:3.01:37,3,0	1/1:12,14:26:28.97:336,29,0	1/1:2,23:23:66.21:824,66,0	1/1:0,21:21:40.10:486,40,0	1/1:0,6:6:12.04:147,12,0
chr10	38709365	.	CATACT	C	6711.90	PASS	AB=1.000;AC=49;AF=0.907;AN=54;BaseQRankSum=-2.288;DP=546;FS=0.000;HRun=0;HaplotypeScore=262.8972;InbreedingCoeff=-0.0200;MQ=37.44;MQ0=3;MQRankSum=-1.721;QD=12.62;ReadPosRankSum=1.174;VQSLOD=3.6676;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:16,5:21:42.12:693,42,0	1/1:8,0:8:6.57:19,7,0	1/1:17,0:10:9.98:274,10,0	0/1:16,0:4:32.30:33,0,32	1/1:18,0:18:0.10:0,0,0	0/1:20,0:20:3.48:78,0,3	0/1:21,0:20:12.70:65,0,13	1/1:40,0:40:74.62:811,75,0	1/1:19,0:19:34.18:256,34,0	1/1:5,20:25:75.25:1335,75,0	1/1:3,19:22:6.01:119,6,0	1/1:13,9:22:36.12:677,36,0	1/1:16,0:16:18.29:58,18,0	0/1:18,0:18:12.49:23,0,12	1/1:17,0:17:2.96:29,3,0	0/1:18,0:18:23.44:76,0,23	1/1:19,0:18:11.87:99,12,0	1/1:7,3:10:24.08:440,24,0	1/1:21,0:21:33:364,33,0	1/1:32,0:32:4.03:12,4,0	./.	1/1:13,0:13:11.26:38,11,0	1/1:21,0:21:12.25:36,12,0	1/1:9,0:9:2.50:9,2,0	1/1:26,0:26:27.09:371,27,0	1/1:22,0:21:40.97:357,41,0	1/1:24,0:23:25.93:303,26,0	1/1:16,0:16:12.40:135,12,0
chr10	38709403	.	AT	A	11534.14	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=2.621;DP=609;FS=2.955;HRun=8;HaplotypeScore=179.2482;InbreedingCoeff=0.9946;MQ=70.17;MQ0=1;MQRankSum=-9.034;QD=24.18;ReadPosRankSum=0.007;VQSLOD=2.7233;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:54.16:0,54,642	1/1:0,8:8:17.98:163,18,0	0/0:25,0:25:54.04:0,54,564	0/0:21,0:19:41.79:0,42,466	1/1:2,17:19:47.89:432,48,0	1/1:0,28:28:78.12:752,78,0	1/1:4,20:24:63.03:596,63,0	1/1:11,16:27:66.03:613,66,0	1/1:0,20:20:60.10:578,60,0	0/0:28,0:28:78.24:0,78,942	0/0:28,0:28:68.94:0,69,791	1/1:2,18:20:48.07:463,48,0	1/1:5,25:30:66.09:637,66,0	1/1:1,29:30:84.13:811,84,0	1/1:2,19:21:56.94:521,57,0	1/1:2,23:25:72.05:681,72,0	1/1:2,19:20:54.08:521,54,0	0/0:10,0:10:30.03:0,30,332	1/1:6,19:25:57.09:550,57,0	1/1:2,35:37:99:960,105,0	1/1:4,15:19:32.94:309,33,0	1/1:2,15:17:47.95:441,48,0	1/1:5,18:23:59.94:548,60,0	1/1:1,11:12:33.05:318,33,0	1/1:2,11:13:33:309,33,0	1/1:5,15:20:14.77:416,15,0	1/1:1,21:22:60.05:570,60,0	1/1:0,16:16:36.06:347,36,0
chr10	38711864	.	A	AC	1040.28	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=-3.378;DP=470;FS=20.137;HRun=7;HaplotypeScore=78.2576;InbreedingCoeff=0.6946;MQ=79.69;MQ0=0;MQRankSum=-2.035;QD=18.58;ReadPosRankSum=-0.629;VQSLOD=2.0979;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:45.06:0,45,433	0/0:7,0:7:18.03:0,18,172	0/1:20,0:17:15.35:15,0,89	0/0:24,0:14:3.32:0,3,161	0/0:31,0:31:90.14:0,90,867	1/1:9,11:20:57.14:654,57,0	1/1:3,12:15:42.13:500,42,0	0/0:24,0:24:50.70:0,51,483	0/0:7,0:7:12.02:0,12,114	0/0:17,0:17:48.08:0,48,463	0/0:18,0:18:51.03:0,51,477	0/0:13,0:13:36.06:0,36,347	0/0:19,0:19:40.31:0,40,379	0/0:13,0:13:24.03:0,24,229	0/0:17,0:17:36.04:0,36,343	0/0:17,0:17:39.05:0,39,368	0/0:21,0:21:42.02:0,42,390	0/0:8,0:8:24.04:0,24,230	0/0:16,0:16:36.05:0,36,347	0/0:23,0:23:60.08:0,60,574	0/0:7,0:7:9.01:0,9,87	0/0:16,0:16:27.03:0,27,259	0/0:13,0:13:33.03:0,33,313	0/0:18,0:18:54.03:0,54,505	0/0:13,0:13:26.98:0,27,247	0/0:21,0:21:45.06:0,45,430	0/0:27,0:27:51.08:0,51,490	0/0:5,0:5:15.02:0,15,146
chr10	38711890	.	ATT	A	3837.84	PASS	AB=0.917;AC=29;AF=0.518;AN=56;BaseQRankSum=5.685;DP=503;FS=4.943;HRun=4;HaplotypeScore=96.5235;InbreedingCoeff=0.6809;MQ=70.70;MQ0=7;MQRankSum=-2.311;QD=14.27;ReadPosRankSum=1.679;VQSLOD=0.1884;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:45.95:0,46,720	1/1:7,0:8:16.60:77,17,0	0/0:52,0:19:37.08:0,37,487	0/0:38,0:15:13.62:0,14,116	0/1:29,0:29:46.27:74,0,46	0/0:21,0:21:53.88:0,54,649	0/0:16,0:16:35.82:0,36,360	1/1:14,4:18:36.07:470,36,0	1/1:7,0:7:11.84:45,12,0	0/0:18,0:18:48.16:0,48,833	0/0:19,0:19:48.16:0,48,843	0/0:10,0:10:27.08:0,27,442	0/1:14,0:14:32.30:32,0,37	0/1:13,0:13:9.04:44,0,9	1/1:20,0:20:39.53:162,40,0	1/1:15,0:15:17.04:78,17,0	1/1:20,0:21:42.83:180,43,0	0/0:14,0:14:39.12:0,39,664	1/1:1,8:10:30.10:419,30,0	1/1:20,4:25:57.05:689,57,0	0/1:2,0:2:0:0,0,0	1/1:15,0:15:15.05:121,15,0	0/0:12,0:12:30.10:0,30,521	0/0:12,0:12:36.01:0,36,568	1/1:24,0:24:42.94:218,43,0	0/1:6,14:21:93.52:654,0,94	1/1:4,18:22:29.51:404,30,0	1/1:5,0:5:12.04:170,12,0
chr10	38711892	.	TTTA	T	4688.91	PASS	AB=0.978;AC=28;AF=0.500;AN=56;BaseQRankSum=6.232;DP=507;FS=4.024;HRun=0;HaplotypeScore=100.5608;InbreedingCoeff=0.6498;MQ=70.48;MQ0=8;MQRankSum=-3.759;QD=17.37;ReadPosRankSum=3.155;VQSLOD=4.2564;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:53.45:0,53,846	1/1:9,0:9:18.97:161,19,0	0/0:54,0:19:45.59:0,46,563	0/0:40,0:15:8.14:0,8,133	0/1:28,0:28:55.33:183,0,55	0/0:21,0:21:53.55:0,54,694	0/0:13,0:13:36.11:0,36,461	1/1:5,11:16:3.50:490,4,0	1/1:8,0:8:14.80:112,15,0	0/0:19,0:19:53.99:0,54,994	0/0:19,0:19:52.35:0,52,1067	0/0:9,0:9:27.09:0,27,537	0/1:14,0:14:32.12:112,0,32	0/1:13,0:13:16.77:124,0,17	1/1:20,0:20:44.79:363,45,0	1/1:15,0:15:18.95:157,19,0	1/1:22,0:22:53.65:445,54,0	0/0:15,0:15:42.13:0,42,817	1/1:9,1:10:29.99:353,30,0	1/1:9,17:27:27.83:608,28,0	0/0:0,2:2:0.47:0,0,1	1/1:15,0:15:19.43:266,19,0	0/0:11,0:11:33.09:0,33,640	0/0:13,0:13:39:0,39,678	1/1:26,0:26:47.21:335,47,0	0/1:19,1:21:99:550,0,116	1/1:19,2:21:16.71:260,17,0	1/1:5,0:5:12.04:170,12,0
chr10	38711893	.	TTAA	T	5651.13	PASS	AB=0.997;AC=27;AF=0.482;AN=56;BaseQRankSum=3.164;DP=516;FS=1.239;HRun=0;HaplotypeScore=98.5818;InbreedingCoeff=0.4462;MQ=70.16;MQ0=8;MQRankSum=-2.321;QD=18.05;ReadPosRankSum=3.356;VQSLOD=4.3578;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:51.10:0,51,757	1/1:1,6:9:23.45:300,23,0	0/0:57,0:20:20.40:0,20,396	0/1:40,0:16:22.90:23,0,96	1/1:0,23:26:67.99:691,68,0	0/0:21,0:21:30.21:0,30,326	0/0:14,0:14:35.44:0,35,267	0/1:17,0:17:83.27:212,0,83	1/1:0,7:8:15.05:230,15,0	0/0:20,0:20:57.16:0,57,917	0/0:20,0:20:60.10:0,60,1071	0/0:9,0:9:27.08:0,27,462	1/1:1,11:12:17.93:254,18,0	1/1:1,11:13:2.61:248,3,0	1/1:0,17:20:45.15:699,45,0	1/1:0,12:15:26.95:341,27,0	1/1:1,20:22:54.18:847,54,0	0/0:14,0:14:39.12:0,39,739	0/1:12,0:12:55.06:101,0,55	0/1:28,0:28:85.56:217,0,86	0/0:2,0:2:0.47:0,0,1	1/1:0,11:15:42.02:558,42,0	0/0:11,0:11:32.45:0,32,562	0/0:14,0:14:39:0,39,538	1/1:0,17:26:50.99:656,51,0	0/1:22,0:22:99:160,0,175	0/1:22,0:22:34.21:55,0,34	0/1:5,0:5:21.44:60,0,21
chr10	38711894	.	TAA	T	1724.37	PASS	AB=0.952;AC=25;AF=0.446;AN=56;BaseQRankSum=8.372;DP=535;FS=1.422;HRun=18;HaplotypeScore=106.9472;InbreedingCoeff=0.8063;MQ=69.01;MQ0=8;MQRankSum=-4.910;QD=7.13;ReadPosRankSum=6.002;VQSLOD=0.1804;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:21:34.15:0,34,312	1/1:9,0:9:19.32:94,19,0	0/0:55,1:20:5.62:0,6,158	0/1:38,1:16:15.19:15,0,25	1/1:27,0:27:14.98:174,15,0	1/1:8,10:21:28.54:191,29,0	1/1:3,11:14:7.85:179,8,0	0/0:18,0:18:12.74:0,13,164	1/1:8,0:8:14.05:70,14,0	0/0:14,0:23:50.35:0,50,481	0/0:11,0:21:57.03:0,57,577	0/0:9,0:9:23.50:0,23,226	1/1:12,0:12:16.95:91,17,0	1/1:12,1:13:20.20:120,20,0	1/1:20,0:20:42.86:225,43,0	1/1:15,0:15:19.47:94,19,0	1/1:22,0:22:51.32:259,51,0	0/0:12,0:16:40.71:0,41,378	0/0:14,0:14:16.91:0,17,117	0/0:29,0:29:5.70:0,6,189	0/0:2,0:2:0.47:0,0,1	1/1:15,0:15:33.84:170,34,0	0/0:14,0:14:33.02:0,33,349	0/0:13,1:14:1.64:0,2,222	1/1:26,0:26:48.18:253,48,0	0/0:22,0:23:19.01:0,19,193	0/0:26,0:26:20.44:0,20,144	0/0:6,0:6:5.99:0,6,59
chr10	38712262	.	C	CA	1057.06	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-7.624;DP=675;FS=0.640;HRun=8;HaplotypeScore=69.6090;InbreedingCoeff=0.9914;MQ=68.14;MQ0=1;MQRankSum=-0.626;QD=23.49;ReadPosRankSum=-0.355;VQSLOD=3.9611;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,102,929	0/0:17,0:17:48.01:0,48,435	0/0:29,0:23:32.15:0,32,352	0/0:23,0:19:36.60:0,37,297	0/0:25,0:25:72.04:0,72,659	1/1:2,17:19:48.14:554,48,0	1/1:5,19:25:35.38:625,35,0	0/0:28,0:28:63:0,63,569	0/0:24,0:24:63.03:0,63,576	0/0:20,0:20:57.03:0,57,522	0/0:24,0:24:72.04:0,72,659	0/0:18,0:18:39.01:0,39,357	0/0:26,0:26:72.02:0,72,654	0/0:18,0:18:42.02:0,42,384	0/0:26,0:26:66.03:0,66,604	0/0:18,0:18:42.02:0,42,384	0/0:33,0:33:96.05:0,96,879	0/0:27,0:28:74.07:0,74,663	0/0:25,0:24:65.95:0,66,584	0/0:25,0:25:75.03:0,75,682	0/0:26,0:26:75.04:0,75,686	0/0:29,0:29:72.03:0,72,655	0/0:20,0:20:45.01:0,45,412	0/0:31,0:31:84:0,84,760	0/0:16,0:16:45.02:0,45,411	0/0:17,0:17:51.03:0,51,467	0/0:32,0:32:71.99:0,72,648	0/0:8,0:8:15.01:0,15,137
chr10	38713067	.	GGGT	G	239.02	PASS	AB=0.970;AC=10;AF=0.192;AN=52;BaseQRankSum=5.076;DP=281;FS=26.964;HRun=0;HaplotypeScore=36.7135;InbreedingCoeff=0.1464;MQ=60.05;MQ0=12;MQRankSum=-0.217;QD=2.88;ReadPosRankSum=5.928;VQSLOD=0.2571;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:6:15:0,15,194	0/1:4,0:4:18.38:18,0,34	0/0:58,0:12:32.68:0,33,438	0/0:42,0:12:22.47:0,22,253	1/1:4,0:4:8.49:41,8,0	0/0:8,0:8:5.91:0,6,42	0/1:12,0:12:2.82:3,0,113	0/0:8,0:8:15.44:0,15,124	0/0:3,0:3:4.29:0,4,33	./.	0/0:5,0:5:9:0,9,102	0/0:7,0:7:12.89:0,13,198	0/1:4,0:4:5.84:6,0,35	1/1:7,1:7:11.58:73,12,0	0/1:10,2:12:50.82:101,0,51	0/1:14,0:14:30.49:30,0,58	0/1:24,1:25:89.99:104,0,90	0/0:4,0:4:9:0,9,139	0/0:5,0:4:11.60:0,12,107	0/0:9,0:9:20.99:0,21,261	./.	0/0:1,0:1:3:0,3,27	0/0:2,0:2:3.01:0,3,39	0/0:9,0:8:26.51:0,27,263	0/0:5,0:5:14.99:0,15,130	0/0:7,0:6:8.95:0,9,110	0/0:13,0:13:38.85:0,39,488	0/0:3,0:3:9.03:0,9,157
chr10	38713069	.	G	GT	135.14	PASS	AC=10;AF=0.192;AN=52;BaseQRankSum=-0.972;DP=270;FS=2.261;HRun=2;HaplotypeScore=33.7960;InbreedingCoeff=0.6410;MQ=63.65;MQ0=9;MQRankSum=0.598;QD=3.22;ReadPosRankSum=0.267;VQSLOD=-0.0957;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:6:14.50:0,14,107	0/0:4,0:4:11.68:0,12,75	0/0:54,0:12:23.13:0,23,189	0/0:38,0:13:8.92:0,9,107	0/0:4,0:4:11.75:0,12,72	1/1:4,4:8:5.22:32,5,0	1/1:5,10:15:2.72:22,3,0	0/0:7,0:7:14.93:0,15,120	0/0:2,0:2:5.96:0,6,45	./.	0/0:4,0:4:8.33:0,8,50	1/1:6,0:6:2.83:21,3,0	0/0:5,0:5:8.89:0,9,62	0/0:7,0:7:11.70:0,12,68	0/0:12,0:12:35.30:0,35,226	0/0:14,0:14:20.34:0,20,120	0/0:26,0:26:44.10:0,44,280	0/0:5,0:5:4.57:0,5,46	0/0:4,0:4:11.90:0,12,98	0/0:8,0:9:20.65:0,21,139	./.	0/0:1,0:1:2.99:0,3,24	1/1:2,0:2:3:27,3,0	1/1:11,0:10:23.22:170,23,0	0/0:5,0:5:14.88:0,15,112	0/0:5,0:5:8.97:0,9,78	0/0:12,0:12:35.55:0,36,266	0/0:3,0:3:8.96:0,9,77
chr10	38714833	.	GA	G	4123.92	PASS	AB=0.915;AC=30;AF=0.536;AN=56;BaseQRankSum=8.117;DP=571;FS=2.067;HRun=12;HaplotypeScore=65.6648;InbreedingCoeff=0.8054;MQ=78.59;MQ0=0;MQRankSum=1.040;QD=13.75;ReadPosRankSum=5.672;VQSLOD=4.0414;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,1:31:45.55:0,46,633	1/1:1,5:6:14.94:116,15,0	0/1:30,2:27:30.28:30,0,164	0/0:15,1:14:23.26:0,23,177	1/1:4,22:28:69.81:521,70,0	1/1:5,13:18:2.43:202,2,0	1/1:3,7:10:14.93:116,15,0	0/0:25,0:25:54.82:0,55,525	1/1:2,14:16:38.85:302,39,0	0/0:18,0:18:42.07:0,42,416	0/0:19,0:22:30.83:0,31,452	1/1:1,12:13:2.44:202,2,0	1/1:2,9:12:22.95:168,23,0	1/1:2,15:19:42.91:313,43,0	1/1:6,12:18:29.87:232,30,0	1/1:4,14:20:42.88:314,43,0	1/1:3,26:29:60.27:540,60,0	0/0:25,1:27:45.63:0,46,606	0/0:20,1:24:23.50:0,23,416	0/0:20,0:23:53.85:0,54,514	0/1:14,1:16:0.03:0,0,214	1/1:2,23:26:40.43:486,40,0	1/1:3,16:19:44.82:348,45,0	1/1:4,14:18:13.56:233,14,0	0/0:21,2:23:32.09:0,32,481	0/0:30,3:34:8.09:0,8,588	0/0:18,0:19:32.22:0,32,359	0/0:9,0:9:5.08:0,5,222
chr10	38717237	.	AT	A	3983.20	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=9.881;DP=591;FS=3.102;HRun=8;HaplotypeScore=61.6822;InbreedingCoeff=0.9755;MQ=70.45;MQ0=0;MQRankSum=-1.936;QD=24.29;ReadPosRankSum=-0.567;VQSLOD=4.1956;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:48.13:0,48,568	0/0:7,0:7:15.05:0,15,181	0/0:14,1:14:31.52:0,32,362	0/0:10,0:7:15.04:0,15,178	0/0:29,0:29:81.25:0,81,976	0/0:22,0:22:63.18:0,63,751	0/0:16,0:16:41.49:0,41,479	1/1:4,24:28:72.09:688,72,0	0/0:18,0:18:48.14:0,48,570	0/0:30,0:30:78.23:0,78,931	0/0:25,0:25:72.22:0,72,870	0/0:16,0:16:45.14:0,45,544	0/0:21,0:21:60.17:0,60,715	0/0:23,0:23:66.20:0,66,797	0/0:25,0:24:72.21:0,72,858	0/0:23,0:24:71.87:0,72,832	0/0:20,0:20:54.17:0,54,652	0/0:20,0:20:54.17:0,54,650	1/1:2,16:18:48.08:463,48,0	1/1:2,30:32:75.10:724,75,0	1/1:0,14:14:36.06:348,36,0	0/0:16,0:16:45.09:0,45,517	0/0:28,0:28:81.24:0,81,967	0/0:11,0:11:6.10:0,6,302	0/0:3,0:33:77.56:0,78,394	1/1:5,28:33:50.90:775,51,0	1/1:5,24:29:72.11:695,72,0	1/1:0,10:10:30.05:290,30,0
chr10	38717683	.	CTAATCACATACAT	C	21889.83	PASS	AB=0.517;AC=33;AF=0.589;AN=56;BaseQRankSum=17.411;DP=459;FS=1.806;HRun=0;HaplotypeScore=201.1544;InbreedingCoeff=0.8878;MQ=83.33;MQ0=0;MQRankSum=-14.904;QD=90.83;ReadPosRankSum=3.125;VQSLOD=5.0002;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:60.21:0,60,3621	1/1:0,7:7:21.07:872,21,0	0/0:21,0:21:63.20:0,63,3247	0/0:14,0:14:36.12:0,36,2034	1/1:0,25:25:45.15:1624,45,0	0/0:27,0:27:81.28:0,81,4850	0/0:14,0:14:42.14:0,42,2804	1/1:1,29:30:87.07:2457,87,0	1/1:0,12:12:27.09:1120,27,0	0/0:28,0:28:81.28:0,81,5145	0/0:29,0:29:87.30:0,87,5433	0/0:20,0:20:60.19:0,60,3709	1/1:0,8:8:21.07:871,21,0	1/1:0,12:12:36.12:1492,36,0	1/1:0,17:17:39.13:1620,39,0	1/1:0,17:17:48.16:1991,48,0	1/1:0,6:6:6.02:249,6,0	0/0:12,0:12:36.12:0,36,1882	1/1:0,12:12:32.88:879,33,0	1/1:0,30:30:74.92:2506,75,0	1/1:0,6:6:6.02:175,6,0	1/1:0,13:13:36.12:1419,36,0	0/0:18,0:18:54.19:0,54,3490	0/0:15,0:15:45.15:0,45,3051	1/1:0,13:13:33.11:1371,33,0	0/1:1,14:15:99:1390,0,162	1/1:0,15:15:36.12:1480,36,0	1/1:0,3:3:9.03:375,9,0
chr10	38718648	.	CCTCT	C	18391.40	PASS	AB=0.550;AC=43;AF=0.768;AN=56;BaseQRankSum=9.175;DP=597;FS=11.844;HRun=0;HaplotypeScore=108.7408;InbreedingCoeff=0.8987;MQ=80.95;MQ0=2;MQRankSum=-6.148;QD=40.42;ReadPosRankSum=5.333;VQSLOD=4.3369;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:93.32:0,93,2402	1/1:1,12:13:39.13:726,39,0	0/0:27,0:27:78.26:0,78,1827	0/0:23,0:22:52.56:0,53,1288	1/1:1,23:24:45.14:837,45,0	1/1:0,12:12:30.10:560,30,0	1/1:1,17:18:27.09:504,27,0	1/1:3,22:25:63.20:1130,63,0	1/1:2,27:29:78.27:1454,78,0	0/0:22,0:22:66.22:0,66,1657	0/0:16,0:16:41.90:0,42,1118	1/1:0,19:18:42.14:784,42,0	1/1:3,12:15:30.10:560,30,0	1/1:1,22:23:57.20:1064,57,0	1/1:3,24:27:54.18:1008,54,0	1/1:2,23:24:60.21:1120,60,0	1/1:1,35:36:86.85:1623,87,0	0/0:22,0:22:60.21:0,60,1520	1/1:3,9:12:30.10:527,30,0	1/1:2,19:20:45.11:802,45,0	1/1:0,28:28:48.16:894,48,0	1/1:1,19:20:51.17:952,51,0	1/1:2,19:21:36.05:672,36,0	1/1:4,22:26:30:560,30,0	1/1:1,11:12:24.08:448,24,0	0/1:4,18:22:96.63:992,0,97	1/1:3,14:17:33.11:616,33,0	1/1:0,10:10:30.10:560,30,0
chr10	38718797	.	ACAAGAC	A	1030.71	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.179;DP=686;FS=15.763;HRun=0;HaplotypeScore=139.7494;InbreedingCoeff=0.9180;MQ=91.48;MQ0=0;MQRankSum=-6.843;QD=42.95;ReadPosRankSum=-0.829;VQSLOD=2.3827;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,166,5676	0/0:4,0:4:12.04:0,12,426	0/0:28,0:28:81.26:0,81,2575	0/0:35,0:35:99:0,102,3419	0/0:28,0:28:78.27:0,78,2636	1/1:2,6:8:12.04:283,12,0	1/1:1,15:15:39.09:864,39,0	0/0:38,0:38:99:0,105,3291	0/0:40,0:40:99:0,117,4150	0/0:23,0:23:69.24:0,69,2458	0/0:17,0:15:42.13:0,42,1388	0/0:17,0:17:51.18:0,51,1739	0/0:24,0:24:72.25:0,72,2414	0/0:21,0:21:60.21:0,60,2100	0/0:31,0:30:87.30:0,87,2976	0/0:28,0:28:81.28:0,81,2839	0/0:41,0:41:99:0,117,4033	0/0:28,0:28:81.25:0,81,2654	0/0:16,0:16:45.15:0,45,1572	0/0:21,0:20:45.15:0,45,1534	0/0:34,0:34:99:0,102,3501	0/0:17,0:17:51.18:0,51,1760	0/0:13,0:13:36.12:0,36,1206	0/0:38,0:38:99:0,108,3684	0/0:20,0:19:54.19:0,54,1866	0/0:30,0:30:84.29:0,84,2933	0/0:13,0:13:33.11:0,33,1138	0/0:2,0:2:6.02:0,6,214
chr10	38719823	.	TCACACACACA	T	765.87	PASS	AC=16;AF=0.333;AN=48;BaseQRankSum=4.472;DP=338;FS=0.000;HRun=0;HaplotypeScore=118.2288;InbreedingCoeff=0.6676;MQ=65.70;MQ0=22;MQRankSum=-4.697;QD=10.08;ReadPosRankSum=-1.559;VQSLOD=2.2080;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:18:17.56:0,18,168	1/1:4,1:5:2.29:87,2,0	./.	./.	1/1:7,0:7:5.23:51,5,0	1/1:10,0:9:9.03:192,9,0	1/1:11,0:10:3:25,3,0	0/0:15,0:13:5.05:0,5,44	1/1:3,0:5:2.92:9,3,0	0/0:11,0:11:15.05:0,15,333	0/0:9,0:9:11.35:0,11,143	0/0:10,0:11:24.08:0,24,605	1/1:8,3:9:9.03:184,9,0	0/0:9,2:9:2.98:0,3,21	./.	1/1:12,3:15:9.50:165,9,0	1/1:7,2:8:9.03:211,9,0	0/0:7,0:8:6.02:0,6,100	0/0:9,0:9:3.48:0,3,94	0/0:7,0:7:12.04:0,12,277	./.	0/0:18,0:18:2.64:0,3,12	0/0:13,0:12:15.02:0,15,366	0/0:12,0:13:17.30:0,17,447	0/0:16,0:13:9.01:0,9,136	0/0:13,0:12:27.08:0,27,990	0/0:8,0:8:12.04:0,12,326	0/0:5,0:4:12.04:0,12,272
chr10	38719870	.	CACACACAT	C	409.14	PASS	AB=0.968;AC=15;AF=0.268;AN=56;BaseQRankSum=5.078;DP=389;FS=2.001;HRun=0;HaplotypeScore=112.1467;InbreedingCoeff=0.0462;MQ=38.36;MQ0=54;MQRankSum=-3.221;QD=2.71;ReadPosRankSum=1.250;VQSLOD=2.1487;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:26,1:24:29.68:30,0,214	0/1:6,1:7:32.88:47,0,33	0/0:36,0:2:3.01:0,3,31	0/0:39,0:10:17.70:0,18,170	0/1:7,0:6:15.56:16,0,22	0/1:11,0:6:13.02:109,0,13	0/0:11,0:9:15.08:0,15,78	0/1:16,0:13:0.73:1,0,24	0/1:6,0:6:0:0,0,0	0/0:10,0:9:23.38:0,23,265	0/0:13,0:11:0.37:0,0,68	0/0:16,0:16:24.04:0,24,316	1/1:7,0:6:7.12:109,7,0	0/1:10,1:7:11.33:21,0,11	0/0:9,0:8:2.82:0,3,18	1/1:11,0:11:6.89:74,7,0	0/1:8,0:7:30.03:123,0,30	0/0:13,0:10:11.31:0,11,129	0/1:19,0:15:13.42:13,0,150	0/0:5,0:4:9:0,9,122	0/1:13,0:10:0.14:0,0,0	0/1:7,1:6:9.75:10,0,11	0/0:15,0:13:12.02:0,12,195	0/0:18,0:17:23.91:0,24,373	0/0:15,0:10:8.80:0,9,74	0/0:23,0:17:40.23:0,40,639	0/0:7,0:6:11.86:0,12,172	0/0:6,0:4:11.94:0,12,90
chr10	38719872	.	CACACAT	C	577.38	PASS	AB=0.969;AC=17;AF=0.315;AN=54;BaseQRankSum=3.418;DP=380;FS=1.805;HRun=0;HaplotypeScore=105.2632;InbreedingCoeff=-0.0158;MQ=37.50;MQ0=54;MQRankSum=0.219;QD=3.44;ReadPosRankSum=2.237;VQSLOD=1.7972;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:23:99:103,0,144	0/1:7,0:7:32.46:37,0,32	0/0:38,0:2:3.01:0,3,31	0/0:41,0:10:17.69:0,18,170	0/1:5,0:4:2.10:24,0,2	0/1:11,0:6:13.44:68,0,13	0/0:11,0:9:16.77:0,17,81	0/1:17,0:13:0.73:1,0,23	0/1:6,0:6:0:0,0,0	0/0:10,0:9:4.55:0,5,150	0/1:12,1:11:31.11:71,0,31	0/0:14,0:14:9.18:0,9,91	1/1:7,0:6:7.29:126,7,0	0/1:10,1:7:11.33:21,0,11	0/0:8,0:7:2.94:0,3,18	1/1:9,2:11:8.64:76,9,0	0/1:8,0:7:30.03:133,0,30	0/0:13,0:10:10.51:0,11,77	0/1:18,0:15:13.43:13,0,127	0/1:6,0:5:0.01:0,0,69	0/1:13,0:10:0.07:0,0,0	0/1:6,2:6:10.98:45,0,11	0/0:14,0:12:8.99:0,9,93	0/0:17,0:16:11.68:0,12,270	0/0:16,0:11:1.07:0,1,43	0/0:22,0:16:37.19:0,37,456	0/0:5,0:5:8.94:0,9,127	./.
chr10	38719875	.	A	ATT	1411.41	PASS	AB=0.993;AC=30;AF=0.556;AN=54;BaseQRankSum=3.599;DP=387;FS=58.351;HRun=0;HaplotypeScore=102.4569;InbreedingCoeff=0.2636;MQ=39.11;MQ0=49;MQRankSum=-4.985;QD=6.14;ReadPosRankSum=-3.504;VQSLOD=-0.2249;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:23:20.55:0,21,422	0/1:8,0:8:0.24:0,0,23	0/0:40,0:2:6.02:0,6,84	0/0:45,0:11:22.43:0,22,327	0/0:5,0:4:1.76:0,2,27	1/1:12,0:7:17.30:103,17,0	1/1:11,1:11:21.81:215,22,0	0/1:15,0:12:26.71:115,0,27	1/1:8,0:8:2.60:20,3,0	0/0:9,0:8:20.87:0,21,244	0/0:13,0:11:14.65:0,15,133	1/1:5,8:13:12.04:210,12,0	1/1:7,0:7:11.37:79,11,0	1/1:12,0:8:1.24:63,1,0	1/1:8,0:7:5.05:26,5,0	0/1:13,0:13:9.42:22,0,9	0/1:8,0:7:20.32:111,0,20	0/0:13,0:10:21.05:0,21,268	0/1:19,0:15:82.03:129,0,82	0/0:5,0:5:2.92:0,3,37	1/1:12,0:9:4.20:23,4,0	1/1:9,0:7:5.75:27,6,0	1/1:5,8:12:6.45:81,6,0	1/1:15,3:17:3.57:136,4,0	0/1:15,1:11:7.56:8,0,8	0/1:21,0:15:99:213,0,143	0/1:5,0:5:2.49:2,0,36	./.
chr10	38719878	.	TTCTC	T	1196.38	PASS	AB=0.862;AC=15;AF=0.278;AN=54;BaseQRankSum=-0.953;DP=398;FS=14.649;HRun=0;HaplotypeScore=108.4890;InbreedingCoeff=-0.1570;MQ=39.11;MQ0=43;MQRankSum=-2.798;QD=6.76;ReadPosRankSum=0.880;VQSLOD=1.5942;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:22:33:0,33,592	0/1:7,1:8:5.83:6,0,64	0/0:40,0:2:6.02:0,6,121	0/0:45,0:11:1.86:0,2,550	0/0:5,0:4:5.77:0,6,34	0/0:11,0:7:12.90:0,13,69	0/1:13,0:13:3.18:3,0,99	0/1:8,9:15:99:452,0,198	0/0:8,2:10:3.01:0,3,58	0/0:10,0:9:23.87:0,24,429	0/0:13,0:11:9.61:0,10,116	0/1:14,0:14:42.16:55,0,42	0/1:8,3:11:49.43:120,0,49	0/1:11,2:9:13.28:13,0,117	0/0:9,1:9:4.33:0,4,104	0/0:12,2:14:6.57:0,7,127	0/1:8,2:9:99:123,0,148	0/0:12,0:10:20.93:0,21,261	0/1:16,3:15:99:201,0,263	1/1:1,4:5:8.78:91,9,0	1/1:10,2:10:3.43:20,3,0	0/0:7,1:7:2.98:0,3,65	0/0:15,0:13:4.74:0,5,23	0/1:20,0:19:52.24:52,0,164	0/1:10,6:11:11.20:20,0,11	0/1:16,3:13:99:184,0,149	0/0:3,0:3:2.37:0,2,8	./.
chr10	38719881	.	TCTCA	T	783.99	PASS	AB=0.984;AC=18;AF=0.333;AN=54;BaseQRankSum=-1.071;DP=402;FS=10.125;HRun=0;HaplotypeScore=112.1983;InbreedingCoeff=-0.2681;MQ=39.44;MQ0=39;MQRankSum=-0.247;QD=3.68;ReadPosRankSum=2.578;VQSLOD=1.3280;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:23:3.23:3,0,398	0/1:9,0:9:11.03:11,0,64	0/0:41,0:2:6.02:0,6,118	0/0:45,0:11:18.79:0,19,518	1/1:4,0:4:0.09:2,0,0	0/0:13,0:9:15.63:0,16,116	0/0:12,0:12:13.07:0,13,186	0/1:17,0:15:99:291,0,122	0/0:10,0:10:2.90:0,3,38	0/0:11,0:10:26.55:0,27,411	0/1:13,0:11:26.74:27,0,121	0/1:14,1:15:21.60:22,0,59	0/1:10,1:11:62.30:84,0,62	0/1:12,1:9:17.18:17,0,66	0/0:9,1:9:8.81:0,9,83	0/1:14,0:14:0.74:1,0,99	0/1:12,0:11:86.91:87,0,92	0/0:12,0:10:12.29:0,12,203	0/1:18,0:16:99:134,0,167	0/1:5,0:5:4.86:51,0,5	0/0:12,0:10:1.62:0,2,12	0/0:8,0:7:3.01:0,3,50	0/0:15,0:13:5.93:0,6,46	0/1:21,0:20:40.72:41,0,146	0/1:16,0:11:31.31:31,0,51	0/1:16,0:12:99:104,0,151	1/1:4,0:4:4.57:21,5,0	./.
chr10	38719884	.	CAT	C	1764.37	PASS	AB=0.893;AC=24;AF=0.444;AN=54;BaseQRankSum=-0.623;DP=412;FS=4.058;HRun=0;HaplotypeScore=106.6712;InbreedingCoeff=-0.1662;MQ=39.83;MQ0=33;MQRankSum=0.297;QD=6.92;ReadPosRankSum=3.405;VQSLOD=3.2715;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:23:36.80:37,0,276	0/1:6,3:9:12.15:74,0,12	0/0:41,0:2:5.75:0,6,71	0/0:45,0:11:9.56:0,10,339	1/1:1,4:5:2.82:49,3,0	0/1:11,1:9:37.07:37,0,70	0/1:12,0:12:16.08:16,0,174	0/1:17,2:17:10.09:202,0,10	0/0:8,2:10:0.47:0,0,1	0/0:12,0:11:4.14:0,4,226	0/1:13,1:12:64.65:65,0,94	0/1:15,1:16:8.39:8,0,21	0/1:10,1:11:13.22:123,0,13	0/1:11,2:11:5.90:96,0,6	0/1:9,2:10:16.59:17,0,19	0/1:9,6:15:21.14:67,0,21	1/1:11,1:11:22.97:257,23,0	0/0:12,0:11:17.85:0,18,190	1/1:16,3:17:18.52:287,19,0	0/1:5,1:6:17.23:37,0,17	0/0:9,3:10:5.24:0,5,26	0/0:5,3:7:2.47:0,2,9	0/0:15,1:15:5.91:0,6,50	0/1:21,0:20:29.54:137,0,30	0/1:14,2:12:71.05:93,0,71	1/1:13,2:12:28.49:310,28,0	1/1:3,1:4:4.02:13,4,0	./.
chr10	38719886	.	TTCTC	T	360.46	PASS	AB=0.600;AC=9;AF=0.173;AN=52;BaseQRankSum=-4.363;DP=427;FS=13.180;HRun=0;HaplotypeScore=122.3428;InbreedingCoeff=0.3821;MQ=39.60;MQ0=29;MQRankSum=1.965;QD=5.01;ReadPosRankSum=2.475;VQSLOD=1.8446;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:11,12:22:11.23:188,11,0	0/0:9,0:9:11.95:0,12,159	./.	0/0:43,0:11:0:0,0,1	0/0:5,0:5:2.99:0,3,24	0/0:12,0:9:3.48:0,3,46	0/0:13,0:13:3.01:0,3,39	0/0:24,0:22:21.04:0,21,341	0/0:10,0:10:3.01:0,3,57	1/1:11,1:11:6.02:95,6,0	1/1:10,4:12:2.67:47,3,0	0/0:16,0:16:6.01:0,6,81	0/0:12,0:12:13.86:0,14,134	0/0:14,0:12:10.84:0,11,134	0/0:13,0:12:12.04:0,12,203	0/0:16,0:16:7.58:0,8,130	0/0:11,0:11:17.54:0,18,257	0/1:4,6:11:29.55:148,0,30	0/0:20,0:18:27.52:0,28,401	0/0:9,0:9:6.02:0,6,80	1/1:11,0:10:0.47:1,0,0	0/0:8,0:7:3.01:0,3,68	0/0:17,0:16:3.01:0,3,39	0/0:21,0:20:6.91:0,7,100	0/0:17,0:13:0:0,0,0	0/0:15,0:12:29.71:0,30,387	0/0:5,0:5:2.88:0,3,16	./.
chr10	38723007	.	C	CTA	6353.69	PASS	AB=0.676;AC=31;AF=0.554;AN=56;BaseQRankSum=-3.138;DP=467;FS=1.886;HRun=0;HaplotypeScore=72.1011;InbreedingCoeff=0.6538;MQ=70.86;MQ0=0;MQRankSum=-4.155;QD=21.54;ReadPosRankSum=0.660;VQSLOD=5.1789;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:96.28:0,96,1161	1/1:0,6:6:15.05:244,15,0	0/0:11,0:11:13.54:0,14,121	0/0:12,0:10:18.03:0,18,194	1/1:5,19:24:17.25:795,17,0	0/0:26,0:26:65.70:0,66,734	0/0:16,0:16:33.05:0,33,374	1/1:17,1:30:41.41:379,41,0	0/1:4,9:13:9.80:364,0,10	0/0:17,0:17:34.34:0,34,398	0/0:14,0:14:27.06:0,27,308	0/1:15,1:17:3.98:4,0,448	1/1:2,11:13:18.06:294,18,0	0/1:5,7:12:12.85:312,0,13	0/1:6,8:14:43.72:361,0,44	1/1:7,11:18:30.10:490,30,0	1/1:3,27:30:57.19:930,57,0	0/0:9,0:9:24.08:0,24,295	1/1:21,4:27:6.71:392,7,0	1/1:5,0:13:21:185,21,0	1/1:7,0:9:15.87:130,16,0	1/1:3,4:8:15.04:222,15,0	0/0:12,0:13:26.91:0,27,307	0/0:19,0:19:39.12:0,39,479	0/1:4,9:15:6.82:410,0,7	1/1:6,1:20:42.90:404,43,0	1/1:11,0:20:35.95:304,36,0	1/1:1,0:6:15.01:133,15,0
chr10	38724910	.	A	AAAAC	334.05	PASS	AB=1.000;AC=3;AF=0.167;AN=18;BaseQRankSum=-2.576;DP=343;FS=0.000;HRun=0;HaplotypeScore=30.0239;MQ=11.32;MQ0=303;MQRankSum=-0.515;QD=9.03;ReadPosRankSum=0.421;VQSLOD=1.3304;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/0:2,0:1:2.97:0,3,20	./.	./.	0/1:20,0:4:0:0,0,0	./.	./.	./.	./.	0/0:7,0:2:6.02:0,6,94	0/0:17,0:7:2.80:0,3,20	./.	./.	./.	./.	./.	./.	./.	./.	0/0:5,0:7:12.01:0,12,112	./.	0/0:5,0:1:2.97:0,3,20	0/0:22,0:4:2.97:0,3,20	./.	1/1:7,10:11:18.06:413,18,0	0/0:5,0:2:6:0,6,53	./.	./.
chr10	38725102	.	T	TA	1043.38	PASS	AB=0.763;AC=26;AF=0.591;AN=44;BaseQRankSum=-2.134;DP=341;FS=0.000;HRun=12;HaplotypeScore=33.4104;InbreedingCoeff=0.3482;MQ=22.21;MQ0=187;MQRankSum=0.885;QD=4.48;ReadPosRankSum=1.763;VQSLOD=-0.3734;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:5:8.95:0,9,66	1/1:0,2:2:6.01:58,6,0	./.	./.	1/1:8,5:9:3.48:30,3,0	0/0:8,0:3:2.98:0,3,22	0/0:6,0:3:5.96:0,6,44	1/1:13,8:3:6:53,6,0	./.	0/1:15,1:9:8.33:8,0,106	0/0:17,0:10:8.90:0,9,62	0/1:12,0:4:0.95:1,0,13	0/1:7,12:10:10.01:75,0,10	1/1:7,8:9:11.86:102,12,0	1/1:1,9:5:9.01:87,9,0	1/1:3,12:9:20.73:204,21,0	0/1:6,8:5:0:0,0,0	0/0:10,0:1:2.92:0,3,17	0/1:7,3:6:8.84:49,0,9	1/1:12,12:17:5.62:186,6,0	./.	1/1:4,5:6:3:29,3,0	0/0:10,0:8:8.87:0,9,62	./.	1/1:4,12:10:8.95:75,9,0	0/1:7,11:10:0.93:140,0,1	1/1:5,8:9:9.01:87,9,0	./.
chr10	38726762	.	GC	G	2107.56	PASS	AB=0.962;AC=18;AF=0.321;AN=56;BaseQRankSum=-6.333;DP=507;FS=4.974;HRun=10;HaplotypeScore=73.8778;InbreedingCoeff=0.5982;MQ=73.20;MQ0=6;MQRankSum=0.663;QD=9.41;ReadPosRankSum=3.245;VQSLOD=2.6719;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:9,32:41:77.75:676,78,0	0/0:3,0:5:2.84:0,3,14	0/0:42,0:24:39:0,39,300	0/1:33,0:15:19.72:20,0,44	0/0:4,0:11:20.37:0,20,127	0/0:23,0:23:42.06:0,42,431	0/0:19,0:19:48.09:0,48,505	0/1:9,1:10:14.03:14,0,73	0/0:12,0:19:37.58:0,38,233	1/1:5,14:19:36.33:289,36,0	1/1:5,11:17:17.96:210,18,0	1/1:5,11:16:20.16:181,20,0	0/0:8,0:17:17.17:0,17,103	0/0:3,0:12:17.44:0,17,106	0/1:8,0:16:14.33:14,0,31	0/0:6,0:19:26.37:0,26,154	0/0:3,0:14:14.41:0,14,90	1/1:3,14:17:7:334,7,0	0/0:19,0:17:27.05:0,27,287	0/1:13,1:14:2.06:2,0,176	0/0:24,0:24:26.88:0,27,449	0/0:3,0:6:8.52:0,9,43	1/1:6,14:20:2.76:244,3,0	1/1:6,13:19:35.98:312,36,0	0/0:3,0:8:5.67:0,6,29	0/0:16,0:16:27:0,27,277	0/0:17,0:19:50.78:0,51,473	0/0:5,0:5:12.03:0,12,133
chr10	38726869	.	A	ATCAGCCTCTGCCTCTGCC	15375.97	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-1.500;DP=537;FS=1.826;HRun=0;HaplotypeScore=212.5398;InbreedingCoeff=0.9531;MQ=65.29;MQ0=0;MQRankSum=-8.921;QD=53.57;ReadPosRankSum=-2.423;VQSLOD=4.3480;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:95.97:0,96,2692	1/1:2,2:4:3.01:263,3,0	0/0:22,0:17:42.51:0,43,886	0/0:29,0:28:74.19:0,74,1588	1/1:6,4:12:11.92:444,12,0	0/0:18,0:18:54.09:0,54,1832	0/0:34,0:34:90.10:0,90,2701	1/1:19,0:19:50.98:828,51,0	1/1:7,9:29:30.10:1913,30,0	0/0:15,0:15:45.07:0,45,1135	0/0:13,0:13:33.07:0,33,1217	0/0:3,0:17:38.96:0,39,1085	1/1:3,7:19:20.83:1587,21,0	1/1:2,12:18:12.04:849,12,0	1/1:11,9:27:32.36:1921,32,0	1/1:4,7:15:18.06:1292,18,0	1/1:5,6:13:15.05:1162,15,0	0/0:34,0:34:93.24:0,93,3632	1/1:5,0:18:48.07:1193,48,0	1/1:5,0:17:22.95:648,23,0	1/1:23,0:23:41.76:414,42,0	1/1:10,0:10:14.96:249,15,0	0/0:4,0:11:27.01:0,27,785	0/0:3,0:14:24:0,24,819	1/1:4,0:17:12.04:493,12,0	1/1:5,0:11:24.05:734,24,0	1/1:6,0:24:19.31:744,19,0	1/1:6,0:9:20.99:643,21,0
chr10	38728439	.	G	GA	1127.30	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-8.286;DP=541;FS=1.233;HRun=9;HaplotypeScore=60.4385;InbreedingCoeff=0.9906;MQ=81.31;MQ0=0;MQRankSum=-3.686;QD=21.27;ReadPosRankSum=0.506;VQSLOD=4.3925;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:58.99:0,59,496	0/0:13,0:13:32.99:0,33,286	0/0:14,0:13:22.96:0,23,163	0/0:29,0:28:38.97:0,39,389	0/0:25,2:27:26.76:0,27,457	0/0:19,0:19:47.98:0,48,416	0/0:13,0:14:35.03:0,35,292	0/0:33,1:34:20.41:0,20,555	0/0:10,0:10:29.98:0,30,257	0/0:29,0:29:65.50:0,65,572	0/0:17,0:18:46.19:0,46,395	1/1:1,7:8:18.05:199,18,0	0/0:13,0:13:38.99:0,39,339	0/0:12,0:12:32.99:0,33,286	0/0:22,0:22:65.97:0,66,569	0/0:14,0:14:38.98:0,39,339	0/0:22,0:22:53.90:0,54,451	0/0:14,0:14:32.58:0,33,271	0/0:30,0:30:80.97:0,81,703	0/0:22,0:23:52.02:0,52,465	0/0:14,0:14:35.49:0,35,295	0/0:20,0:20:53.99:0,54,469	1/1:2,21:23:54.15:597,54,0	1/1:6,16:22:22.08:472,22,0	0/0:13,0:13:32.96:0,33,280	0/0:21,0:21:50.97:0,51,443	0/0:28,0:28:71.98:0,72,624	0/0:12,0:12:20.75:0,21,182
chr10	38729117	.	CG	C	372	PASS	AB=0.875;AC=9;AF=0.346;AN=26;BaseQRankSum=1.989;DP=172;FS=12.250;HRun=2;HaplotypeScore=43.2628;InbreedingCoeff=0.6516;MQ=50.45;MQ0=25;MQRankSum=-0.046;QD=7.02;ReadPosRankSum=0.880;VQSLOD=-0.6957;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:28:42.70:0,43,288	./.	1/1:8,0:2:2.97:10,3,0	0/1:6,1:3:6.29:14,0,6	./.	0/0:10,0:10:5.72:0,6,29	0/0:6,0:15:26.04:0,26,150	0/0:1,0:1:3.01:0,3,41	./.	0/0:16,0:16:41.66:0,42,309	0/0:14,0:14:26.90:0,27,223	1/1:10,0:10:26.62:181,27,0	./.	./.	0/0:1,0:1:2.97:0,3,20	./.	./.	0/0:12,0:12:23.91:0,24,210	./.	./.	./.	./.	1/1:13,2:14:26.69:190,27,0	1/1:3,9:12:9.02:95,9,0	./.	./.	./.	./.
chr10	38729119	.	G	GGGAA	507.36	PASS	AB=1.000;AC=6;AF=0.214;AN=28;BaseQRankSum=0.242;DP=212;FS=7.408;HRun=0;HaplotypeScore=82.7174;InbreedingCoeff=0.4076;MQ=50.85;MQ0=25;MQRankSum=-1.997;QD=6.59;ReadPosRankSum=-3.731;VQSLOD=-0.5606;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:39,0:38:47.65:48,0,516	./.	0/0:12,0:2:2.98:0,3,22	0/0:8,0:3:3.56:0,4,13	./.	1/1:3,9:17:6.02:118,6,0	1/1:15,0:15:27.09:443,27,0	0/0:1,0:1:3.01:0,3,60	./.	0/0:16,0:17:40.79:0,41,530	0/0:14,0:16:18.12:0,18,318	0/0:14,0:14:26.42:0,26,275	./.	./.	0/0:1,0:1:3.01:0,3,37	./.	./.	0/0:16,0:16:6.81:0,7,268	./.	./.	./.	./.	0/0:20,0:19:7.35:0,7,235	0/0:13,0:12:9.02:0,9,100	./.	0/1:3,0:2:0:0,0,0	./.	./.
chr10	38730033	.	TAAAA	T	2610.86	PASS	AB=0.625;AC=33;AF=0.589;AN=56;BaseQRankSum=0.533;DP=267;FS=26.991;HRun=17;HaplotypeScore=50.5124;InbreedingCoeff=0.7110;MQ=54.86;MQ0=26;MQRankSum=-3.338;QD=17.76;ReadPosRankSum=3.464;VQSLOD=0.1541;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:16:38.90:0,39,484	1/1:2,4:6:8.91:114,9,0	0/0:18,0:4:5.58:0,6,81	0/0:8,0:4:7.57:0,8,90	1/1:0,7:7:17.82:228,18,0	0/0:17,0:19:45.15:0,45,842	0/0:2,0:2:6.02:0,6,133	1/1:10,9:14:26.91:326,27,0	1/1:2,0:3:2.93:23,3,0	0/0:8,0:9:24.08:0,24,426	0/0:9,0:9:24.05:0,24,399	0/0:2,0:5:12.04:0,12,219	1/1:0,2:2:6.02:76,6,0	1/1:1,5:6:5.64:75,6,0	1/1:2,7:9:17.92:213,18,0	1/1:3,6:9:14.96:190,15,0	1/1:2,10:11:24.01:304,24,0	0/0:21,0:21:39.05:0,39,844	1/1:8,4:12:17.68:209,18,0	1/1:5,4:9:8.31:67,8,0	1/1:1,4:4:3.01:38,3,0	1/1:0,2:2:5.98:58,6,0	0/0:4,0:3:3.54:0,4,129	0/0:1,0:1:3.01:0,3,57	0/1:4,6:9:21.38:172,0,21	1/1:3,7:11:23.99:274,24,0	1/1:2,7:11:16.44:299,16,0	1/1:4,2:5:14.98:146,15,0
chr10	38730102	.	AT	A	572.92	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.404;DP=377;FS=3.567;HRun=1;HaplotypeScore=46.4925;InbreedingCoeff=0.9214;MQ=87.55;MQ0=1;MQRankSum=-0.518;QD=33.70;ReadPosRankSum=1.660;VQSLOD=3.3198;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:54.18:0,54,802	0/0:5,0:5:15.04:0,15,204	0/0:20,0:20:57.04:0,57,643	0/0:14,0:15:15.94:0,16,368	0/0:13,0:13:30.08:0,30,425	0/0:12,0:12:36.05:0,36,510	0/0:10,0:10:30.08:0,30,426	0/0:29,0:29:87.11:0,87,1151	0/0:8,0:8:24.06:0,24,336	0/0:7,0:7:21.07:0,21,314	0/0:14,0:14:39.13:0,39,583	0/0:5,0:5:12.04:0,12,179	0/0:13,0:13:39.10:0,39,540	0/0:11,0:11:27.06:0,27,364	0/0:16,0:16:41.89:0,42,605	0/0:8,0:8:21.07:0,21,311	0/0:24,0:23:66.21:0,66,966	0/0:17,0:17:51.17:0,51,762	0/0:18,0:18:51.14:0,51,706	0/0:10,0:10:30.10:0,30,448	0/0:16,0:16:45.12:0,45,631	0/0:8,0:8:21.07:0,21,314	0/0:7,0:7:21.06:0,21,294	0/0:7,0:7:21.07:0,21,312	1/1:0,17:17:48.16:668,48,0	0/0:14,0:14:39.12:0,39,566	0/0:23,0:23:66.19:0,66,943	0/0:10,0:10:30.10:0,30,446
chr10	38730685	.	T	TG	8559.31	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-14.037;DP=705;FS=7.797;HRun=1;HaplotypeScore=66.6026;InbreedingCoeff=0.9992;MQ=80.40;MQ0=0;MQRankSum=-1.580;QD=36.58;ReadPosRankSum=4.082;VQSLOD=5.0213;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,111,1360	1/1:0,8:8:20.99:286,21,0	0/0:24,0:24:43.83:0,44,595	0/0:18,0:18:50.21:0,50,539	1/1:0,31:31:86.78:1161,87,0	0/0:32,0:32:96.30:0,96,1228	0/0:15,0:15:45.14:0,45,570	0/0:33,0:33:99:0,99,1226	1/1:1,31:32:66.22:984,66,0	0/0:34,0:34:96.15:0,96,1168	0/0:20,0:20:60.17:0,60,748	0/0:24,0:24:63.16:0,63,771	1/1:1,26:27:66.22:986,66,0	1/1:2,21:23:57.19:851,57,0	1/1:1,31:32:84.28:1256,84,0	1/1:0,34:34:90.30:1345,90,0	1/1:1,24:25:42.49:793,42,0	0/0:15,0:15:36.87:0,37,523	0/0:20,0:20:57.12:0,57,682	0/0:33,0:33:86.10:0,86,1086	0/0:23,0:23:60.11:0,60,683	1/1:0,22:22:60.20:897,60,0	0/0:25,0:25:66.92:0,67,857	0/0:20,0:20:57.11:0,57,680	0/0:19,0:19:57.14:0,57,676	0/0:30,0:30:90.27:0,90,1125	0/0:38,0:38:99:0,105,1320	0/0:10,0:10:30.10:0,30,388
chr10	38730969	.	TA	T	5666.23	PASS	AB=0.697;AC=35;AF=0.625;AN=56;BaseQRankSum=4.214;DP=569;FS=10.151;HRun=13;HaplotypeScore=70.9584;InbreedingCoeff=0.5625;MQ=69.56;MQ0=2;MQRankSum=0.059;QD=13.33;ReadPosRankSum=3.560;VQSLOD=4.6818;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:18:47.41:0,47,409	1/1:0,5:5:8.95:66,9,0	0/1:27,1:18:21:21,0,69	0/0:25,0:14:8.21:0,8,112	1/1:11,14:27:52.32:343,52,0	1/1:0,24:24:62.61:460,63,0	1/1:4,13:17:32.80:241,33,0	0/1:12,11:23:8.88:188,0,9	1/1:6,17:23:41.74:307,42,0	0/0:19,0:21:41.06:0,41,417	0/0:14,0:15:32.89:0,33,305	0/0:13,1:14:11.13:0,11,259	0/1:5,7:12:19.69:126,0,20	1/1:4,13:17:11.48:212,11,0	1/1:3,22:24:57.11:417,57,0	1/1:2,17:20:46.75:334,47,0	0/1:7,12:19:7.45:275,0,7	0/0:22,1:23:29.52:0,30,423	0/1:6,12:18:65.25:212,0,65	1/1:7,18:25:51.57:374,52,0	1/1:3,18:21:44.72:328,45,0	1/1:2,15:17:32.68:234,33,0	0/0:13,0:14:38.88:0,39,356	0/0:14,0:14:2.21:0,2,183	1/1:1,14:15:38.78:285,39,0	1/1:9,29:39:30.68:533,31,0	1/1:4,26:32:72.65:515,73,0	1/1:6,11:18:5.62:195,6,0
chr10	38731111	.	G	GCT	17876.37	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-4.942;DP=614;FS=5.220;HRun=0;HaplotypeScore=80.3644;InbreedingCoeff=0.9997;MQ=90.58;MQ0=1;MQRankSum=-1.343;QD=47.54;ReadPosRankSum=1.990;VQSLOD=6.2194;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:66.20:0,66,948	1/1:0,14:14:33.11:618,33,0	0/0:24,0:24:64.77:0,65,907	0/0:26,0:26:63.08:0,63,857	1/1:1,33:34:96.33:1783,96,0	0/0:31,0:31:90.25:0,90,1262	0/0:15,0:15:45.15:0,45,662	1/1:9,15:25:63.19:1043,63,0	1/1:1,25:26:69.24:1292,69,0	0/0:25,0:25:75.22:0,75,1062	0/0:19,0:19:54.18:0,54,794	0/0:18,0:18:54.17:0,54,771	1/1:0,11:11:33.11:618,33,0	1/1:0,18:18:48.16:898,48,0	1/1:0,31:31:87.30:1630,87,0	1/1:1,25:26:69.21:1293,69,0	1/1:0,29:29:75.26:1405,75,0	0/0:18,0:18:54.16:0,54,774	1/1:5,10:17:35.47:617,35,0	1/1:0,26:26:69.24:1259,69,0	1/1:0,18:18:41.80:770,42,0	1/1:0,24:25:72.25:1348,72,0	0/0:19,0:19:57.19:0,57,836	0/0:19,0:19:57.19:0,57,839	1/1:1,14:15:36.12:660,36,0	1/1:2,26:29:80.85:1384,81,0	1/1:4,16:20:42.01:765,42,0	1/1:0,9:9:27.09:495,27,0
chr10	38731204	.	ATTTG	A	473.86	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.307;DP=660;FS=1.237;HRun=0;HaplotypeScore=108.5635;InbreedingCoeff=0.9983;MQ=78.54;MQ0=0;MQRankSum=-2.451;QD=47.39;ReadPosRankSum=0.836;VQSLOD=4.2722;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,105,2442	1/1:0,10:10:30.10:568,30,0	0/0:32,0:32:81.26:0,81,1898	0/0:15,0:15:35.95:0,36,770	0/0:20,0:20:57.19:0,57,1510	0/0:22,0:22:66.19:0,66,1628	0/0:13,0:13:30.10:0,30,777	0/0:23,0:23:66.22:0,66,1617	0/0:32,0:32:96.33:0,96,2500	0/0:23,0:23:66.22:0,66,1642	0/0:19,0:19:51.16:0,51,1306	0/0:34,0:34:99:0,102,2453	0/0:17,0:17:51.18:0,51,1331	0/0:25,0:25:72.25:0,72,1907	0/0:32,0:32:90.28:0,90,2292	0/0:30,0:30:81.28:0,81,2142	0/0:27,0:27:75.15:0,75,1923	0/0:23,0:23:69.13:0,69,1658	0/0:20,0:20:54.17:0,54,1325	0/0:24,0:24:69.24:0,69,1809	0/0:16,0:16:48.16:0,48,1246	0/0:17,0:17:48.16:0,48,1252	0/0:23,0:23:63.21:0,63,1606	0/0:28,0:28:84.29:0,84,2242	0/0:22,0:22:60.20:0,60,1599	0/0:30,0:30:90.28:0,90,2323	0/0:36,0:36:99:0,105,2760	0/0:11,0:11:30.10:0,30,787
chr10	38735835	.	G	GA	3126.10	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-11.081;DP=682;FS=0.389;HRun=9;HaplotypeScore=64.8883;InbreedingCoeff=0.9980;MQ=75.49;MQ0=0;MQRankSum=-1.654;QD=23.68;ReadPosRankSum=0.748;VQSLOD=4.4223;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:74.99:0,75,651	0/0:12,0:12:35.99:0,36,313	0/0:24,1:24:19.26:0,19,374	0/0:15,0:15:30.67:0,31,253	0/0:22,0:22:62.98:0,63,547	1/1:9,23:33:75.03:806,75,0	1/1:4,22:26:60.16:664,60,0	0/0:39,1:40:73.62:0,74,779	0/0:32,0:32:87.45:0,87,756	0/0:36,0:36:80.96:0,81,703	0/0:20,0:20:56.99:0,57,495	1/1:2,26:28:66.18:730,66,0	0/0:15,0:15:41.99:0,42,365	0/0:28,0:28:68.92:0,69,587	0/0:23,0:23:62.98:0,63,547	0/0:30,0:31:79.98:0,80,677	0/0:25,0:25:68.96:0,69,593	0/0:12,0:12:29.97:0,30,260	0/0:30,0:30:74.96:0,75,651	0/0:30,0:30:77.95:0,78,673	0/0:18,0:18:50.99:0,51,443	0/0:26,0:26:53.70:0,54,554	1/1:4,19:24:34.39:604,34,0	1/1:3,18:21:45.12:498,45,0	0/0:24,0:24:65.98:0,66,573	0/0:23,0:23:56.98:0,57,495	0/0:28,0:28:74.97:0,75,651	0/0:9,0:9:26.99:0,27,234
chr10	38736215	.	G	GA	10690.16	PASS	AB=0.557;AC=41;AF=0.732;AN=56;BaseQRankSum=-11.140;DP=664;FS=5.642;HRun=10;HaplotypeScore=70.5997;InbreedingCoeff=0.6994;MQ=79.44;MQ0=0;MQRankSum=0.495;QD=21.04;ReadPosRankSum=3.020;VQSLOD=5.9600;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:62.89:0,63,511	1/1:2,7:10:20.89:205,21,0	0/0:35,0:29:23.84:0,24,193	0/0:24,0:21:9.90:0,10,119	1/1:4,20:24:37.92:556,38,0	1/1:5,27:33:75.02:777,75,0	1/1:2,17:19:33.08:350,33,0	1/1:9,19:27:29.50:509,30,0	1/1:2,17:19:51.13:540,51,0	0/0:32,1:33:34.08:0,34,479	0/0:25,0:26:62.46:0,62,495	1/1:5,17:23:18.41:385,18,0	0/1:3,14:17:3.82:368,0,4	1/1:2,18:21:41.04:481,41,0	1/1:2,39:40:93.23:981,93,0	1/1:2,20:23:59.98:618,60,0	1/1:4,9:13:2.44:230,2,0	0/0:11,0:11:17.96:0,18,147	1/1:5,10:15:29.05:279,29,0	1/1:5,23:29:33.82:555,34,0	0/1:4,17:21:50.06:304,0,50	1/1:0,20:21:56.98:586,57,0	1/1:8,34:44:67.77:920,68,0	1/1:3,5:8:9.02:95,9,0	1/1:3,20:22:48.12:508,48,0	1/1:5,25:30:69.02:683,69,0	1/1:5,31:38:55.61:737,56,0	0/1:2,6:8:22.78:23,0,37
chr10	38736720	.	CT	C	4737.36	PASS	AB=0.785;AC=32;AF=0.571;AN=56;BaseQRankSum=3.964;DP=572;FS=2.930;HRun=12;HaplotypeScore=72.2807;InbreedingCoeff=0.6944;MQ=65.79;MQ0=4;MQRankSum=1.553;QD=12.77;ReadPosRankSum=1.098;VQSLOD=5.1060;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,2:35:60.81:0,61,759	0/1:2,4:6:13.57:58,0,14	0/1:32,1:15:8.66:9,0,67	0/0:31,0:12:11.72:0,12,84	1/1:7,19:27:49.79:377,50,0	0/0:3,1:17:5.49:0,5,116	0/0:7,0:17:19.89:0,20,100	1/1:7,22:29:29.22:406,29,0	1/1:3,18:21:53.77:418,54,0	0/0:13,0:13:27.05:0,27,274	0/0:19,1:22:24.53:0,25,401	0/1:2,1:12:2.91:3,0,86	1/1:7,14:22:37.86:283,38,0	1/1:0,7:7:17.93:139,18,0	1/1:5,20:27:63.77:471,64,0	1/1:7,12:19:35.84:278,36,0	1/1:1,17:20:39.92:291,40,0	0/0:19,0:19:45.04:0,45,436	1/1:6,11:16:35.85:277,36,0	1/1:7,20:27:14.30:294,14,0	1/1:6,12:18:29.88:232,30,0	1/1:5,15:21:37.87:284,38,0	0/0:5,0:20:40.08:0,40,220	0/0:3,1:20:19.54:0,20,176	0/1:10,12:21:16.41:216,0,16	1/1:3,17:19:47.78:371,48,0	1/1:5,15:22:21.43:330,21,0	0/0:4,0:4:3.01:0,3,30
chr10	38738221	.	A	AAAGAAAAAAAG	19636.85	PASS	AB=0.925;AC=38;AF=0.679;AN=56;BaseQRankSum=-8.492;DP=611;FS=5.123;HRun=0;HaplotypeScore=169.5142;InbreedingCoeff=0.4716;MQ=52.54;MQ0=8;MQRankSum=-3.592;QD=41.69;ReadPosRankSum=3.987;VQSLOD=4.1757;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:82.06:0,82,860	1/1:6,0:6:18.04:443,18,0	0/0:35,0:7:14.29:0,14,73	0/0:28,0:14:22.33:0,22,254	1/1:7,21:41:25.33:1251,25,0	0/1:16,0:15:99:333,0,145	0/1:21,0:21:99:377,0,235	1/1:38,0:37:96.62:2181,97,0	1/1:2,8:19:5.84:309,6,0	0/0:20,0:20:54:0,54,575	0/0:20,0:20:54:0,54,769	0/1:11,0:11:50.27:255,0,50	1/1:4,6:16:18.74:845,19,0	1/1:0,10:22:17.59:927,18,0	1/1:2,6:16:14.93:762,15,0	1/1:5,14:29:36.06:1723,36,0	1/1:1,7:19:8.92:325,9,0	0/0:5,0:5:11.79:0,12,139	1/1:3,9:24:63.85:1625,64,0	1/1:3,13:25:36.07:885,36,0	1/1:6,0:6:14.92:212,15,0	1/1:3,9:23:31.35:885,31,0	0/1:16,0:16:76.18:255,0,76	0/1:8,0:8:12.36:202,0,12	0/1:5,11:27:26.78:1042,0,27	1/1:3,17:40:99:2403,99,0	1/1:5,20:40:48.33:2180,48,0	1/1:6,0:6:14.98:216,15,0
chr10	38738223	.	A	AG	356.59	PASS	AB=0.953;AC=18;AF=0.321;AN=56;BaseQRankSum=10.337;DP=578;FS=1.378;HRun=0;HaplotypeScore=120.1408;InbreedingCoeff=0.0739;MQ=50.28;MQ0=8;MQRankSum=-5.610;QD=1.11;ReadPosRankSum=6.703;VQSLOD=1.0309;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:82.40:0,82,685	0/1:4,2:6:22.25:49,0,22	0/0:35,0:7:1.34:0,1,47	0/0:26,0:12:25.21:0,25,170	0/1:39,0:39:28.51:29,0,198	0/0:16,0:15:42.59:0,43,317	0/0:21,0:21:55.39:0,55,404	0/1:34,3:36:99:159,0,236	1/1:16,0:16:3.63:10,4,0	0/0:20,0:20:59.61:0,60,560	0/0:21,0:21:56.32:0,56,517	0/0:11,0:11:28.97:0,29,194	0/0:18,0:18:2.50:0,2,65	1/1:20,0:20:10.90:30,11,0	1/1:14,0:14:7.47:21,7,0	0/1:27,0:27:22.03:22,0,35	1/1:16,0:16:6.54:26,7,0	0/0:5,0:5:11.83:0,12,79	0/1:23,0:23:66.09:66,0,121	0/0:23,0:23:9.01:0,9,136	0/1:5,1:6:7.28:7,0,43	0/1:19,0:18:9.66:10,0,16	0/0:16,0:16:36.96:0,37,238	0/0:8,0:8:13.22:0,13,94	0/1:24,0:23:4.50:5,0,79	0/1:35,0:35:77.92:78,0,205	0/1:39,0:39:9.43:9,0,110	0/0:6,0:6:6.45:0,6,74
chr10	38738228	.	A	AAAG	401.89	PASS	AB=0.982;AC=18;AF=0.321;AN=56;BaseQRankSum=12.764;DP=584;FS=3.389;HRun=0;HaplotypeScore=122.8028;InbreedingCoeff=-0.1793;MQ=49.98;MQ0=8;MQRankSum=-7.456;QD=1.10;ReadPosRankSum=8.267;VQSLOD=1.1262;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:78.60:0,79,651	0/1:7,2:9:75.80:98,0,76	0/1:34,0:7:6.54:7,0,26	0/0:27,0:13:29.94:0,30,217	0/1:39,0:39:99:101,0,198	0/0:17,0:16:33.52:0,34,300	0/0:19,0:19:47.84:0,48,327	0/1:35,3:37:72.66:73,0,435	1/1:17,0:17:5.05:20,5,0	0/0:20,0:20:42.93:0,43,499	0/0:21,0:21:59.11:0,59,538	0/0:11,0:11:29.71:0,30,213	0/1:19,0:19:9.88:10,0,118	1/1:20,0:20:14.82:51,15,0	0/1:14,0:14:12:33,0,12	0/1:27,0:27:32.83:33,0,93	0/1:17,0:17:7.86:8,0,17	0/0:6,0:6:11.61:0,12,73	0/0:21,0:21:29.30:0,29,308	0/0:23,0:23:1.27:0,1,144	0/0:6,1:7:0.28:0,0,39	0/1:19,0:18:26.82:31,0,27	0/0:16,0:16:9.26:0,9,194	0/1:8,0:8:2.60:3,0,54	0/1:24,0:23:23.54:24,0,89	0/1:32,0:32:24.21:24,0,347	0/1:40,0:40:36.01:36,0,120	0/1:8,0:8:10.44:10,0,84
chr10	38739057	.	CA	C	6115.50	PASS	AC=42;AF=0.778;AN=54;BaseQRankSum=4.962;DP=547;FS=22.792;HRun=9;HaplotypeScore=57.3522;InbreedingCoeff=0.9283;MQ=53.00;MQ0=52;MQRankSum=-1.095;QD=17.67;ReadPosRankSum=3.073;VQSLOD=3.5942;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:32:84.24:0,84,960	1/1:0,7:7:21.01:191,21,0	0/0:42,0:11:23.71:0,24,189	0/0:44,0:10:16.41:0,16,110	1/1:0,28:29:71.07:636,71,0	1/1:2,17:17:42.02:384,42,0	1/1:2,18:18:33.02:302,33,0	1/1:4,16:17:45.02:410,45,0	1/1:2,11:12:20.23:171,20,0	0/0:17,0:15:39.12:0,39,450	0/0:16,0:16:38.95:0,39,430	1/1:5,0:4:4.99:17,5,0	1/1:1,5:6:8.82:82,9,0	1/1:2,7:9:18.01:164,18,0	1/1:5,9:14:21.01:192,21,0	1/1:3,9:12:32.96:292,33,0	1/1:11,22:27:41.56:430,42,0	0/0:26,0:24:53.96:0,54,578	1/1:4,15:17:45.02:408,45,0	1/1:1,14:15:42.02:384,42,0	1/1:7,4:6:6:55,6,0	1/1:2,21:23:53.95:481,54,0	1/1:18,0:18:29.69:103,30,0	./.	1/1:1,20:20:42.02:383,42,0	1/1:4,26:26:75.04:686,75,0	1/1:2,4:6:11.87:109,12,0	1/1:3,13:14:19.59:237,20,0
chr10	38739058	.	AAAAAAAAAC	A	1098.63	PASS	AB=1.000;AC=7;AF=0.130;AN=54;BaseQRankSum=1.013;DP=547;FS=18.080;HRun=0;HaplotypeScore=133.4797;InbreedingCoeff=0.4512;MQ=53.08;MQ0=52;MQRankSum=-4.460;QD=11.81;ReadPosRankSum=-0.579;VQSLOD=1.5064;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:32:84.28:0,84,3327	0/0:7,0:7:21.07:0,21,573	0/0:42,0:11:26.51:0,27,671	0/1:45,0:11:5.56:6,0,184	0/0:29,0:29:67.63:0,68,1969	0/0:20,0:18:45.15:0,45,1383	0/0:20,0:18:33.11:0,33,1052	0/0:19,0:16:17.69:0,18,1067	0/0:13,0:12:21.07:0,21,689	0/0:17,0:15:39.13:0,39,1495	0/0:17,0:16:39.13:0,39,1336	1/1:1,4:4:6.02:168,6,0	0/0:6,0:6:9.50:0,10,288	0/0:9,0:9:18.06:0,18,428	0/0:14,0:14:21.07:0,21,609	0/0:12,0:12:33.11:0,33,1036	0/0:33,0:27:42.72:0,43,1427	0/0:27,0:24:58.41:0,58,1919	0/1:19,0:17:37.16:37,0,873	0/0:15,0:15:42.14:0,42,1265	0/0:10,0:5:6.02:0,6,192	0/0:22,0:22:57.20:0,57,1578	1/1:1,17:18:36.12:1004,36,0	./.	0/0:21,0:20:42.14:0,42,1252	0/0:30,0:26:75.26:0,75,2304	0/1:6,0:6:13.94:14,0,276	0/0:17,0:15:32.70:0,33,873
chr10	38739692	.	CT	C	3837.12	PASS	AB=0.786;AC=34;AF=0.607;AN=56;BaseQRankSum=5.846;DP=406;FS=0.979;HRun=11;HaplotypeScore=51.3089;InbreedingCoeff=0.6772;MQ=66.14;MQ0=7;MQRankSum=-0.975;QD=14.82;ReadPosRankSum=2.008;VQSLOD=4.0631;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:48.29:0,48,503	1/1:0,5:5:14.98:123,15,0	0/0:29,0:13:4.28:0,4,52	0/0:25,0:13:7.18:0,7,135	1/1:4,12:17:40.85:305,41,0	0/0:15,0:15:39.10:0,39,416	0/0:13,0:13:27.07:0,27,288	1/1:11,19:30:52.99:437,53,0	1/1:3,11:14:16.17:251,16,0	0/1:9,1:10:0.51:1,0,183	0/0:12,0:13:24.25:0,24,214	0/0:3,0:3:6.02:0,6,64	0/1:4,5:10:14.97:87,0,15	1/1:6,5:12:13.14:134,13,0	1/1:5,6:11:23.94:197,24,0	1/1:0,9:9:14.96:123,15,0	1/1:3,14:17:35.95:295,36,0	0/1:10,0:10:17.95:18,0,101	1/1:2,11:13:32.44:253,32,0	1/1:2,11:13:29.79:226,30,0	1/1:8,18:26:15.95:337,16,0	1/1:3,7:11:17:129,17,0	0/0:10,0:10:25.21:0,25,236	0/0:13,0:13:33.08:0,33,352	1/1:0,12:12:29.97:246,30,0	0/1:5,9:14:53.85:181,0,54	1/1:2,14:16:35.95:295,36,0	1/1:0,9:9:23.97:197,24,0
chr10	38739764	.	GCAAGCGCTCTACCACTGAGCTA	G	12961.63	PASS	AC=18;AF=0.333;AN=54;BaseQRankSum=11.792;DP=250;FS=5.044;HRun=0;HaplotypeScore=147.3914;InbreedingCoeff=0.9308;MQ=45.42;MQ0=9;MQRankSum=-9.082;QD=158.07;ReadPosRankSum=4.812;VQSLOD=4.7263;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:42.13:0,42,3159	1/1:0,3:3:9.03:566,9,0	./.	0/0:4,0:3:9.03:0,9,736	1/1:1,20:21:60.16:3249,60,0	0/0:9,0:9:21.07:0,21,1949	0/0:13,0:12:30.10:0,30,3089	0/0:12,0:12:24.04:0,24,1134	1/1:1,8:9:21.06:1119,21,0	0/0:12,0:11:30.10:0,30,2678	0/0:8,0:8:14.95:0,15,1284	0/0:6,0:6:18.06:0,18,1897	1/1:0,3:3:9.03:566,9,0	1/1:0,16:16:42.14:2609,42,0	1/1:1,11:12:33.10:1911,33,0	1/1:0,7:7:21.07:1320,21,0	1/1:2,2:4:11.99:465,12,0	0/0:10,0:10:27.09:0,27,2647	0/0:16,0:14:42.12:0,42,2712	0/0:4,0:4:9.03:0,9,963	0/0:13,0:11:29.96:0,30,2509	1/1:0,7:7:21.07:1157,21,0	0/0:4,0:4:9.03:0,9,799	0/0:11,0:11:33.11:0,33,3423	0/0:4,0:4:12.04:0,12,927	0/0:8,0:7:21.07:0,21,1587	0/0:9,0:8:21.07:0,21,2059	0/0:5,0:4:12.04:0,12,1247
chr10	38739968	.	AC	A	2943.66	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-3.166;DP=748;FS=3.885;HRun=3;HaplotypeScore=99.6165;InbreedingCoeff=0.9989;MQ=84.78;MQ0=0;MQRankSum=-0.348;QD=34.23;ReadPosRankSum=0.995;VQSLOD=3.7984;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,129,1844	0/0:8,0:8:24.08:0,24,345	0/0:19,0:19:54.17:0,54,754	0/0:29,0:29:75.13:0,75,998	0/0:27,0:27:69.22:0,69,975	0/0:43,0:43:99:0,129,1831	0/0:26,0:26:72.22:0,72,996	0/0:46,0:46:99:0,135,1856	0/0:25,0:25:75.24:0,75,1047	0/0:30,0:30:78.26:0,78,1103	0/0:21,0:21:63.20:0,63,877	1/1:0,24:24:69.22:855,69,0	0/0:23,1:24:32.12:0,32,878	0/0:30,0:30:81.27:0,81,1163	0/0:35,0:35:99:0,105,1493	0/0:31,0:31:93.31:0,93,1339	0/0:23,0:23:69.23:0,69,993	0/0:11,0:11:33.11:0,33,475	0/0:19,0:19:54.16:0,54,758	0/0:25,0:25:75.24:0,75,1060	0/0:36,0:36:99:0,105,1511	0/0:19,0:19:57.19:0,57,818	1/1:0,27:27:78.25:967,78,0	1/1:1,34:35:99:1265,102,0	0/0:22,0:22:63.20:0,63,889	0/0:24,0:24:72.24:0,72,1033	0/0:34,0:33:96.31:0,96,1363	0/0:10,0:10:30.10:0,30,432
chr10	38740216	.	CT	C	6150.90	PASS	AB=0.723;AC=38;AF=0.679;AN=56;BaseQRankSum=4.577;DP=616;FS=8.690;HRun=13;HaplotypeScore=67.3561;InbreedingCoeff=0.6874;MQ=65.49;MQ0=2;MQRankSum=-1.839;QD=13.67;ReadPosRankSum=2.557;VQSLOD=5.1179;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,2:24:29.17:0,29,444	1/1:1,7:8:14.82:109,15,0	0/0:16,0:12:18.55:0,19,142	0/1:7,0:6:15.59:16,0,50	1/1:5,27:32:68.38:497,68,0	1/1:3,26:30:61.81:517,62,0	1/1:1,14:16:34.85:247,35,0	1/1:9,23:31:59.59:435,60,0	1/1:2,15:17:35.79:262,36,0	0/0:24,0:25:44.44:0,44,382	0/0:18,2:22:9.93:0,10,388	0/0:22,2:24:16.14:0,16,453	1/1:5,6:11:11.85:87,12,0	1/1:5,12:17:29.77:219,30,0	1/1:4,21:26:43.46:312,43,0	1/1:4,21:26:61.58:443,62,0	1/1:4,32:36:83.48:613,83,0	0/0:28,4:32:25.27:0,25,561	1/1:5,14:19:38.74:284,39,0	1/1:5,21:29:57.20:416,57,0	1/1:3,16:19:47.67:350,48,0	0/1:7,15:21:40.17:236,0,40	0/0:19,1:21:28.10:0,28,433	0/1:7,1:8:3.62:4,0,128	1/1:3,20:24:49.66:356,50,0	1/1:10,17:27:44.33:323,44,0	1/1:9,20:28:53.36:390,53,0	0/1:4,9:13:12.17:35,0,12
chr10	38741217	.	A	AC	22513.64	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-16.079;DP=670;FS=4.612;HRun=0;HaplotypeScore=54.5347;InbreedingCoeff=0.9927;MQ=94.05;MQ0=0;MQRankSum=-5.464;QD=43.55;ReadPosRankSum=6.750;VQSLOD=4.5417;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,114,1571	1/1:0,4:4:12.04:192,12,0	0/0:30,0:30:87.29:0,87,1214	0/0:29,0:29:81.26:0,81,1112	1/1:0,20:20:54.18:862,54,0	1/1:1,32:33:87.30:1389,87,0	1/1:0,23:23:57.19:911,57,0	1/1:1,33:34:99:1558,99,0	1/1:0,25:25:69.24:1103,69,0	0/0:29,0:29:87.26:0,87,1183	0/0:9,0:9:27.09:0,27,378	1/1:0,28:28:78.27:1247,78,0	1/1:0,35:35:90.31:1439,90,0	1/1:1,28:29:75.26:1198,75,0	1/1:0,31:31:84.29:1343,84,0	1/1:1,29:30:75.26:1199,75,0	1/1:1,21:22:63.21:1007,63,0	0/0:18,0:18:54.07:0,54,725	1/1:1,22:22:66.22:1055,66,0	1/1:1,12:13:33.11:527,33,0	1/1:0,30:30:84.29:1343,84,0	1/1:0,16:16:48.16:767,48,0	1/1:0,17:17:48.16:767,48,0	1/1:1,24:25:66.22:1055,66,0	1/1:1,12:13:36.12:576,36,0	1/1:0,20:20:60.20:960,60,0	1/1:0,37:37:99:1678,105,0	1/1:2,7:9:21.07:336,21,0
chr10	38741784	.	CT	C	921.71	PASS	AB=0.576;AC=9;AF=0.161;AN=56;BaseQRankSum=6.081;DP=554;FS=6.800;HRun=13;HaplotypeScore=59.5579;InbreedingCoeff=0.7782;MQ=67.36;MQ0=1;MQRankSum=0.940;QD=10.97;ReadPosRankSum=1.477;VQSLOD=3.0869;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:28:65.88:0,66,610	0/0:9,0:9:18.03:0,18,175	0/0:21,0:14:7.24:0,7,63	0/0:10,1:7:8.02:0,8,55	0/0:31,0:31:65.12:0,65,608	1/1:1,15:16:32.77:237,33,0	1/1:6,9:15:20.81:153,21,0	0/0:35,0:34:57.06:0,57,539	0/0:11,0:11:23.99:0,24,223	0/0:31,1:32:45.94:0,46,576	0/0:25,0:25:41.90:0,42,451	1/1:5,18:23:47.67:349,48,0	0/0:26,0:26:60:0,60,561	0/0:17,0:17:33.04:0,33,312	0/0:21,0:21:54.08:0,54,521	0/0:25,1:26:47.18:0,47,610	0/0:24,0:25:64.74:0,65,609	0/0:6,0:6:12.02:0,12,116	0/0:13,1:14:2.08:0,2,172	0/0:24,0:24:23.32:0,23,404	0/0:9,0:9:27.04:0,27,263	0/0:12,0:13:17.84:0,18,150	0/1:5,14:19:25.79:165,0,26	1/1:4,7:11:25.89:181,26,0	0/0:22,0:22:31.81:0,32,372	0/0:19,0:19:36.04:0,36,341	0/0:27,0:26:62.07:0,62,594	0/0:17,0:17:38.74:0,39,363
chr10	38742711	.	T	TC	684.43	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-0.911;DP=521;FS=0.684;HRun=2;HaplotypeScore=81.3226;InbreedingCoeff=0.9302;MQ=58.55;MQ0=7;MQRankSum=1.404;QD=15.92;ReadPosRankSum=0.712;VQSLOD=3.6273;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:34:93.28:0,93,1124	0/0:10,0:10:29.42:0,29,229	0/0:6,0:4:11.61:0,12,100	0/0:5,0:4:8.94:0,9,84	0/0:27,0:27:70.98:0,71,559	1/1:5,15:18:36.57:349,37,0	1/1:4,19:23:45.16:457,45,0	0/0:30,0:29:68.17:0,68,571	0/0:7,0:7:11.04:0,11,110	0/0:19,0:19:54.12:0,54,641	0/0:22,0:21:57.12:0,57,674	0/0:14,0:14:32.11:0,32,264	0/0:13,0:13:38.30:0,38,306	0/0:20,0:19:40.55:0,41,261	0/0:13,0:13:35.47:0,35,301	0/0:18,0:18:45.80:0,46,315	0/0:28,0:28:78.19:0,78,527	0/0:13,0:13:36.11:0,36,442	0/0:26,0:26:55.11:0,55,477	0/0:22,0:22:45.66:0,46,371	0/0:12,0:11:17.40:0,17,105	0/0:23,0:23:65.28:0,65,577	0/0:22,0:22:53.06:0,53,425	0/0:23,0:23:61.81:0,62,476	0/0:18,0:18:26.66:0,27,233	0/0:17,0:17:41.22:0,41,342	0/0:24,0:24:52.40:0,52,388	0/0:10,0:10:26.69:0,27,216
chr10	38742715	.	G	GA	8132.60	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-6.739;DP=539;FS=0.968;HRun=11;HaplotypeScore=55.7572;InbreedingCoeff=0.8913;MQ=60.92;MQ0=6;MQRankSum=-1.257;QD=18.87;ReadPosRankSum=0.169;VQSLOD=5.7128;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:36:79.42:0,79,592	1/1:2,7:9:21.04:213,21,0	0/0:8,0:6:14.88:0,15,110	0/0:6,0:5:5.09:0,5,57	1/1:7,21:29:59.92:582,60,0	1/1:20,0:20:44.78:417,45,0	1/1:24,0:24:54.56:539,55,0	1/1:11,21:31:14.39:546,14,0	1/1:2,7:9:18.47:173,18,0	0/0:20,0:20:44.79:0,45,347	0/0:22,0:21:13.50:0,14,253	1/1:4,12:16:20.70:213,21,0	1/1:3,11:14:6.82:251,7,0	1/1:3,17:20:36.07:365,36,0	1/1:5,9:14:24.05:244,24,0	1/1:2,16:19:41.92:410,42,0	1/1:5,24:29:72.14:726,72,0	0/0:14,0:14:20.87:0,21,162	1/1:8,14:25:46.92:471,47,0	1/1:3,16:21:47.76:444,48,0	1/1:2,9:11:18.51:184,19,0	1/1:10,13:23:42.05:417,42,0	1/1:5,16:21:39.08:396,39,0	1/1:6,17:24:24.70:417,25,0	1/1:5,8:14:1.63:164,2,0	1/1:7,14:21:18.78:350,19,0	1/1:3,18:23:20.84:412,21,0	1/1:0,8:10:13.39:201,13,0
chr10	38744018	.	C	CCTCCGCTTTT	55212.32	PASS	AB=0.638;AC=43;AF=0.768;AN=56;BaseQRankSum=-4.437;DP=685;FS=1.496;HRun=0;HaplotypeScore=177.0265;InbreedingCoeff=0.8968;MQ=78.03;MQ0=0;MQRankSum=-17.802;QD=108.69;ReadPosRankSum=0.047;VQSLOD=5.2917;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,117,3552	1/1:2,6:8:21.07:1066,21,0	0/0:25,0:25:66.20:0,66,1961	0/0:22,0:22:54.19:0,54,1679	1/1:12,12:27:66.22:2337,66,0	1/1:13,15:30:78.27:3271,78,0	1/1:10,12:24:66.23:2906,66,0	1/1:19,7:30:81.22:3226,81,0	1/1:8,10:19:45.15:2271,45,0	0/0:43,0:43:99:0,120,3754	0/0:23,0:23:60.19:0,60,1785	1/1:10,15:29:69.24:3104,69,0	1/1:6,12:21:48.16:2252,48,0	1/1:6,15:25:63.22:3138,63,0	1/1:13,20:36:84.29:4011,84,0	1/1:11,13:27:60.21:2920,60,0	1/1:3,10:15:30.10:1488,30,0	0/0:22,0:22:63.22:0,63,2051	1/1:10,3:16:48.15:1870,48,0	1/1:10,11:22:66.17:2619,66,0	1/1:5,4:10:21.07:964,21,0	1/1:8,15:27:66.18:2692,66,0	1/1:11,15:29:75.25:2774,75,0	1/1:14,7:25:51.60:1977,52,0	1/1:6,9:16:45.15:2055,45,0	0/1:16,19:37:99:4069,0,200	1/1:10,13:28:69.24:3295,69,0	1/1:3,3:7:18.06:907,18,0
chr10	38744380	.	T	TCAAAC	33110.91	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-15.413;DP=720;FS=12.533;HRun=0;HaplotypeScore=112.2057;InbreedingCoeff=0.9915;MQ=75.21;MQ0=0;MQRankSum=-8.672;QD=74.41;ReadPosRankSum=0.796;VQSLOD=6.2943;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,142,3055	1/1:1,14:16:36.12:1116,36,0	0/0:13,0:13:33.08:0,33,569	0/0:22,0:22:57.16:0,57,1131	1/1:1,22:23:66.23:1901,66,0	0/0:18,0:18:42.14:0,42,882	0/0:27,0:27:72.23:0,72,1439	1/1:14,23:40:99:2711,105,0	1/1:2,22:26:66.23:2011,66,0	0/0:26,0:26:69.24:0,69,1442	0/0:15,0:15:42.14:0,42,882	0/0:25,0:25:72.23:0,72,1473	1/1:4,21:25:57.20:1764,57,0	1/1:3,14:17:45.15:1285,45,0	1/1:4,38:42:99:3331,111,0	1/1:2,32:34:93.32:2881,93,0	1/1:5,24:29:72.25:2103,72,0	0/0:25,0:25:72.21:0,72,1469	1/1:4,18:22:54.18:1631,54,0	1/1:4,26:31:78.27:2240,78,0	1/1:6,30:38:87.25:2502,87,0	1/1:10,23:33:93.23:2556,93,0	0/0:18,0:18:54.15:0,54,1090	0/0:32,0:32:90.26:0,90,1725	1/1:4,10:14:27.09:781,27,0	1/1:4,14:19:48.16:1422,48,0	1/1:3,29:33:87.30:2599,87,0	1/1:1,2:3:9.03:278,9,0
chr10	38747048	.	C	CG	8895.46	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=1.324;DP=524;FS=0.000;HRun=1;HaplotypeScore=82.5759;InbreedingCoeff=0.9890;MQ=62.34;MQ0=13;MQRankSum=-3.190;QD=29.17;ReadPosRankSum=1.526;VQSLOD=4.5732;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,99,1185	1/1:0,14:13:30.06:416,30,0	0/0:26,0:7:12.40:0,12,118	0/0:30,0:14:19.84:0,20,227	1/1:2,18:18:30.10:440,30,0	0/0:9,0:9:18.14:0,18,267	0/0:14,0:14:42.11:0,42,525	1/1:5,19:23:48.15:686,48,0	1/1:0,12:11:18.06:269,18,0	0/0:15,0:14:35.99:0,36,401	0/0:17,0:17:31.99:0,32,493	0/0:9,0:9:24.06:0,24,296	1/1:0,12:11:27.09:399,27,0	1/1:3,15:17:27.04:376,27,0	1/1:2,22:24:48.16:715,48,0	1/1:2,13:14:33.11:491,33,0	1/1:1,24:24:63.17:908,63,0	0/0:27,0:26:60.19:0,60,775	1/1:1,17:16:45.10:626,45,0	1/1:3,17:19:44.94:603,45,0	1/1:0,20:19:48.11:688,48,0	1/1:2,11:12:24.08:358,24,0	0/0:17,0:17:45.12:0,45,543	0/0:21,0:21:63.17:0,63,784	1/1:1,23:23:45.15:665,45,0	1/1:2,21:22:53.27:675,53,0	1/1:0,12:10:14.81:223,15,0	1/1:1,10:10:24.08:358,24,0
chr10	38747631	.	G	GAA	2250.28	PASS	AB=0.733;AC=31;AF=0.554;AN=56;BaseQRankSum=2.398;DP=420;FS=2.200;HRun=13;HaplotypeScore=53.6554;InbreedingCoeff=0.4109;MQ=59.28;MQ0=9;MQRankSum=-2.970;QD=8.24;ReadPosRankSum=-3.034;VQSLOD=0.1101;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:31:80.62:0,81,688	1/1:2,0:3:2.97:9,3,0	0/1:20,0:7:26.02:29,0,26	0/0:14,0:5:5.54:0,6,40	1/1:4,0:15:14.70:79,15,0	0/0:16,0:17:23:0,23,273	0/0:18,0:21:25.46:0,25,295	1/1:14,15:30:45.35:350,45,0	0/1:4,1:15:5.38:71,0,5	0/0:8,0:8:14.96:0,15,131	0/0:18,0:18:38.94:0,39,337	0/1:15,0:15:19.83:20,0,134	1/1:2,0:8:4.04:16,4,0	0/1:6,0:15:36.11:50,0,36	0/1:4,0:12:9.37:9,0,18	1/1:4,0:7:10.32:50,10,0	0/1:19,2:26:2.10:202,0,2	0/0:17,0:19:1.36:0,1,214	1/1:11,14:29:16.42:506,16,0	1/1:5,13:18:27:321,27,0	1/1:0,2:4:8.52:90,9,0	1/1:3,0:10:12.48:43,12,0	0/0:14,0:14:26.59:0,27,228	0/0:5,0:5:14.90:0,15,116	1/1:1,0:8:7.49:26,7,0	1/1:3,11:15:6.99:299,7,0	1/1:2,4:6:5.98:61,6,0	0/1:3,9:14:4.92:206,0,5
chr10	38748461	.	GAC	G	821.16	PASS	AB=0.882;AC=13;AF=0.232;AN=56;BaseQRankSum=6.925;DP=388;FS=5.278;HRun=0;HaplotypeScore=67.2853;InbreedingCoeff=0.3855;MQ=77.30;MQ0=3;MQRankSum=-0.652;QD=6.62;ReadPosRankSum=7.292;VQSLOD=2.0115;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:89.91:0,90,1240	1/1:8,1:9:7.67:87,8,0	0/0:25,0:17:39.05:0,39,492	0/0:17,0:10:20.34:0,20,182	0/1:12,2:14:19.81:111,0,20	0/0:8,0:8:24.08:0,24,343	0/0:26,0:26:74.96:0,75,937	0/0:12,0:12:26.96:0,27,279	0/1:17,1:18:19.80:115,0,20	0/0:12,0:12:32.96:0,33,428	0/0:5,0:5:15.04:0,15,218	0/0:11,0:11:30.04:0,30,367	0/1:6,4:10:28.32:108,0,28	0/1:15,0:15:43.79:89,0,44	1/1:14,0:14:31.71:148,32,0	1/1:16,0:15:26.41:122,26,0	1/1:21,0:21:2.81:156,3,0	0/0:25,0:25:72.09:0,72,1091	0/0:4,0:4:8.97:0,9,85	0/0:1,0:1:2.98:0,3,21	0/0:31,0:30:68.16:0,68,932	0/1:6,1:7:34.14:52,0,34	0/0:6,0:6:14.06:0,14,152	0/0:18,0:18:53.71:0,54,650	0/0:7,0:7:18.01:0,18,246	0/0:11,0:12:30.07:0,30,417	0/0:9,0:9:18.03:0,18,232	0/0:2,0:2:6.01:0,6,66
chr10	38748464	.	ACC	A	2396.55	PASS	AC=18;AF=0.333;AN=54;BaseQRankSum=-3.591;DP=390;FS=10.870;HRun=10;HaplotypeScore=63.4926;InbreedingCoeff=0.9447;MQ=78.19;MQ0=3;MQRankSum=1.232;QD=19.64;ReadPosRankSum=6.562;VQSLOD=0.9468;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:32:71.71:0,72,1037	1/1:2,7:9:18.52:198,19,0	0/0:30,0:21:49.42:0,49,456	0/0:16,0:9:11.94:0,12,107	1/1:4,9:13:26.98:277,27,0	0/0:8,0:8:24.05:0,24,245	0/0:25,0:25:66.08:0,66,655	0/0:13,0:13:12.04:0,12,161	1/1:4,14:18:23.99:267,24,0	0/0:11,0:12:26.57:0,27,359	0/0:4,0:4:12.04:0,12,179	0/0:9,0:9:18.04:0,18,208	1/1:6,3:9:15.04:165,15,0	1/1:3,11:15:27.05:294,27,0	1/1:0,13:13:36.10:401,36,0	1/1:1,15:15:30.07:335,30,0	1/1:2,20:22:48.13:535,48,0	0/0:26,0:26:72.24:0,72,1127	0/0:4,0:4:12.01:0,12,141	./.	0/0:33,0:32:53.41:0,53,812	1/1:4,3:7:12.03:133,12,0	0/0:8,0:8:13.82:0,14,109	0/0:17,0:18:44.77:0,45,425	0/0:6,0:6:14.08:0,14,195	0/0:12,0:12:21.07:0,21,295	0/0:8,0:8:18.04:0,18,217	0/0:2,0:2:6.02:0,6,77
chr10	38750341	.	AAAATAAAT	A	2921.89	PASS	AC=34;AF=0.680;AN=50;BaseQRankSum=4.276;DP=227;FS=0.000;HRun=0;HaplotypeScore=54.8159;InbreedingCoeff=0.5460;MQ=44.78;MQ0=13;MQRankSum=-6.235;QD=19.48;ReadPosRankSum=-2.148;VQSLOD=1.5326;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:12.93:0,13,430	1/1:1,3:4:3.01:76,3,0	0/0:4,0:1:3.01:0,3,82	./.	1/1:3,2:4:3.01:76,3,0	0/0:7,0:12:18.06:0,18,597	0/0:4,0:3:3.01:0,3,105	1/1:26,6:29:18.03:342,18,0	1/1:1,1:2:3.01:76,3,0	0/0:7,0:7:6.02:0,6,243	0/0:3,0:3:3.01:0,3,124	1/1:2,2:4:3.01:76,3,0	1/1:7,3:10:9.03:227,9,0	1/1:0,1:1:3.01:76,3,0	1/1:4,4:8:9.03:227,9,0	0/0:5,0:4:0:0,0,0	1/1:15,6:20:6.06:295,6,0	0/0:27,0:25:48.16:0,48,1847	1/1:8,5:11:15.05:317,15,0	1/1:3,2:5:6.02:152,6,0	1/1:4,1:4:3.01:76,3,0	./.	1/1:4,2:6:3.01:76,3,0	./.	1/1:2,8:10:15.05:379,15,0	1/1:3,3:6:9.03:227,9,0	1/1:6,1:6:3.01:76,3,0	1/1:2,9:11:12.04:303,12,0
chr10	38752576	.	TA	T	2132.96	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-0.372;DP=547;FS=0.851;HRun=12;HaplotypeScore=68.7341;InbreedingCoeff=0.9764;MQ=68.60;MQ0=1;MQRankSum=0.005;QD=13.25;ReadPosRankSum=3.273;VQSLOD=4.0367;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,1:28:45.41:0,45,603	1/1:4,3:8:15.93:95,16,0	0/0:16,0:10:20.14:0,20,151	0/0:9,0:8:16.45:0,16,112	1/1:6,10:16:14.77:116,15,0	0/0:18,1:20:35.91:0,36,348	0/0:17,1:18:21.33:0,21,376	0/0:14,0:36:59.18:0,59,322	1/1:2,14:17:31.91:238,32,0	0/0:22,1:23:33.84:0,34,509	0/0:17,1:19:21.68:0,22,382	0/0:19,0:19:42.96:0,43,423	1/1:4,11:15:31.91:238,32,0	1/1:5,14:20:37.86:284,38,0	1/1:5,17:23:46.83:354,47,0	1/1:2,19:21:47.81:372,48,0	1/1:5,19:24:50.79:394,51,0	0/0:21,0:22:50.20:0,50,519	0/0:5,1:18:18.92:0,19,169	0/0:5,0:17:37.30:0,37,201	0/0:1,0:13:20.04:0,20,110	1/1:2,13:16:32.83:255,33,0	0/0:19,1:20:18.73:0,19,345	0/0:20,0:21:50.92:0,51,495	0/0:19,2:21:7.62:0,8,431	0/0:6,0:25:56.71:0,57,349	0/0:3,0:23:42.71:0,43,230	0/0:4,0:17:36.93:0,37,185
chr10	38753053	.	AAT	A	1049.66	PASS	AC=6;AF=0.111;AN=54;BaseQRankSum=7.767;DP=449;FS=10.530;HRun=0;HaplotypeScore=58.1411;InbreedingCoeff=0.9354;MQ=62.04;MQ0=1;MQRankSum=2.181;QD=24.41;ReadPosRankSum=-0.278;VQSLOD=3.5354;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:32:90.11:0,90,1465	0/0:7,0:7:21.07:0,21,351	./.	0/0:11,0:5:5.80:0,6,40	0/0:6,0:6:18.06:0,18,301	0/0:19,0:19:36.10:0,36,497	0/0:8,0:8:24.08:0,24,388	0/0:39,0:39:90.29:0,90,1444	0/0:14,0:14:30.10:0,30,499	0/0:24,0:24:63.22:0,63,1048	0/0:16,0:16:36.12:0,36,602	1/1:2,16:18:42.06:499,42,0	0/0:17,0:17:48.16:0,48,786	0/0:13,0:13:36.12:0,36,578	0/0:21,0:21:63.21:0,63,1034	0/0:14,0:14:33.11:0,33,540	0/0:27,0:27:75.23:0,75,1227	0/0:13,0:13:35.99:0,36,566	0/0:13,0:13:39.13:0,39,640	0/0:16,0:16:45.15:0,45,739	0/0:13,0:13:33.11:0,33,546	0/0:5,0:5:9.03:0,9,151	1/1:1,13:14:33.07:403,33,0	1/1:2,9:11:24.05:289,24,0	0/0:7,0:7:21.07:0,21,346	0/0:24,0:24:60.20:0,60,982	0/0:24,0:23:60.19:0,60,959	0/0:14,0:14:36.12:0,36,602
chr10	38753300	.	T	TATAA	1678.86	PASS	AB=0.844;AC=29;AF=0.906;AN=32;BaseQRankSum=-0.036;DP=224;FS=0.000;HRun=0;HaplotypeScore=40.6811;InbreedingCoeff=0.1215;MQ=59.43;MQ0=3;MQRankSum=-1.599;QD=11.27;ReadPosRankSum=-0.888;VQSLOD=1.7618;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:15:6:74,6,0	1/1:0,1:0:3.01:70,3,0	./.	./.	./.	1/1:2,0:6:5.99:49,6,0	./.	1/1:29,0:27:9:120,9,0	1/1:3,3:6:9.03:211,9,0	1/1:6,0:6:3.01:52,3,0	./.	0/0:7,0:7:3.01:0,3,46	./.	./.	1/1:3,3:6:9.03:211,9,0	./.	0/1:22,5:27:31.18:221,0,31	./.	./.	1/1:4,0:4:3.01:70,3,0	1/1:11,0:11:1.25:3,1,0	1/1:0,1:1:3.01:70,3,0	./.	./.	1/1:1,1:2:3.01:70,3,0	1/1:9,1:10:8.99:144,9,0	1/1:11,1:12:12:197,12,0	1/1:9,3:12:9.03:211,9,0
chr10	38753350	.	TA	T	1434.91	PASS	AB=0.833;AC=34;AF=0.708;AN=48;BaseQRankSum=5.420;DP=170;FS=0.000;HRun=13;HaplotypeScore=30.7575;InbreedingCoeff=0.5540;MQ=49.05;MQ0=0;MQRankSum=0.616;QD=10.79;ReadPosRankSum=1.759;VQSLOD=2.1851;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:24.04:0,24,234	./.	./.	0/0:4,0:2:2.97:0,3,20	1/1:0,7:7:11.12:83,11,0	0/0:8,0:8:20.96:0,21,186	0/0:5,0:4:12.01:0,12,111	1/1:10,14:21:28.28:187,28,0	1/1:3,2:5:5.93:44,6,0	0/0:4,0:4:12.01:0,12,114	0/1:4,1:5:6.89:7,0,102	0/0:2,0:2:6.01:0,6,58	1/1:0,1:1:2.98:22,3,0	1/1:0,1:1:2.98:22,3,0	1/1:1,2:3:5.97:44,6,0	1/1:0,4:4:11.93:88,12,0	1/1:6,21:28:16.99:397,17,0	0/1:4,1:4:15.90:16,0,23	1/1:3,9:13:25.32:180,25,0	1/1:2,2:4:5.96:44,6,0	./.	1/1:2,0:2:2.97:21,3,0	./.	1/1:0,2:2:5.97:44,6,0	1/1:2,2:4:5.95:44,6,0	1/1:1,6:7:17.87:129,18,0	1/1:2,3:6:10.97:71,11,0	1/1:2,7:10:22.90:159,23,0
chr10	38753997	.	A	AT	878.27	PASS	AB=0.579;AC=5;AF=0.089;AN=56;BaseQRankSum=-5.091;DP=533;FS=5.469;HRun=9;HaplotypeScore=47.3658;InbreedingCoeff=0.7958;MQ=65.86;MQ0=1;MQRankSum=-1.064;QD=18.69;ReadPosRankSum=2.030;VQSLOD=3.7692;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:71.98:0,72,625	0/0:6,0:6:18:0,18,156	0/0:11,0:9:20.80:0,21,163	0/0:2,0:2:5.98:0,6,47	0/0:34,0:34:59.97:0,60,733	0/0:24,0:24:62.97:0,63,547	0/0:23,0:23:56.95:0,57,491	0/0:29,0:29:65.97:0,66,573	0/0:11,0:11:29.99:0,30,260	0/0:18,0:18:47.98:0,48,417	0/0:18,1:19:16.85:0,17,363	1/1:4,18:22:48.13:531,48,0	0/0:21,0:21:44.97:0,45,391	0/0:13,0:13:29.98:0,30,259	0/0:18,0:18:50.97:0,51,439	0/0:18,0:18:41.99:0,42,364	0/0:33,0:32:77.93:0,78,672	0/0:20,0:19:53.98:0,54,469	0/0:22,0:22:53.99:0,54,469	0/0:19,0:19:50.98:0,51,443	0/0:15,0:15:32.98:0,33,286	0/0:15,0:15:35.98:0,36,313	1/1:3,11:14:27.07:299,27,0	0/1:3,8:11:5:178,0,5	0/0:25,1:26:38.78:0,39,562	0/0:26,0:26:74.98:0,75,651	0/0:13,0:13:35.99:0,36,312	0/0:17,0:17:47.99:0,48,417
chr10	38754816	.	T	TTA	357.40	PASS	AC=8;AF=1.00;AN=8;DP=110;FS=0.000;HRun=0;HaplotypeScore=10.8352;MQ=77.86;MQ0=8;QD=11.53;VQSLOD=2.5487;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	./.	./.	./.	1/1:9,0:9:0.89:2,1,0	./.	1/1:3,0:3:3.01:39,3,0	./.	./.	./.	./.	./.	./.	1/1:5,0:7:12.02:134,12,0	1/1:3,7:11:18.05:250,18,0	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.
chr10	38756865	.	A	AAG	1900	PASS	AB=0.902;AC=28;AF=0.560;AN=50;BaseQRankSum=4.353;DP=573;FS=0.000;HRun=0;HaplotypeScore=95.2145;InbreedingCoeff=0.5909;MQ=75.53;MQ0=7;MQRankSum=-3.220;QD=7.04;ReadPosRankSum=-2.746;VQSLOD=2.7474;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:39:79.26:0,79,857	1/1:3,0:3:9.02:115,9,0	0/0:48,0:27:51.09:0,51,568	0/0:38,0:25:46.74:0,47,441	1/1:11,0:11:3.01:35,3,0	0/1:23,0:23:4.83:5,0,70	0/0:32,0:32:15.12:0,15,180	1/1:19,4:23:45.74:419,46,0	1/1:7,23:30:7.27:102,7,0	0/0:26,0:26:52.92:0,53,657	0/0:9,0:9:18.01:0,18,183	0/0:20,0:19:0.23:0,0,55	0/1:22,0:22:0:0,0,0	./.	./.	1/1:26,1:27:11.39:109,11,0	1/1:18,0:17:3.48:36,3,0	0/0:19,0:19:15.02:0,15,553	1/1:11,0:11:26.41:239,26,0	1/1:6,13:19:17.24:160,17,0	./.	1/1:24,0:24:36.03:420,36,0	0/0:16,0:15:11.42:0,11,81	0/1:12,0:12:4.53:5,0,16	1/1:8,0:8:0.88:2,1,0	0/1:6,11:17:22.41:323,0,22	1/1:19,0:19:8.22:56,8,0	1/1:3,0:3:5.99:49,6,0
chr10	38756873	.	G	GAGACAC	4525.92	PASS	AB=0.839;AC=31;AF=0.596;AN=52;BaseQRankSum=-0.312;DP=589;FS=0.000;HRun=0;HaplotypeScore=117.5777;InbreedingCoeff=0.5294;MQ=68.50;MQ0=11;MQRankSum=-4.378;QD=14.10;ReadPosRankSum=-3.422;VQSLOD=3.1953;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:41:38.98:0,39,1449	1/1:3,0:3:9.02:161,9,0	0/0:43,0:23:46.48:0,46,799	0/0:35,0:22:46.85:0,47,676	1/1:0,10:13:3.01:69,3,0	0/0:23,0:22:42.29:0,42,456	0/0:32,0:33:80.74:0,81,822	1/1:25,0:24:65.63:717,66,0	1/1:28,0:28:9.50:232,10,0	0/0:23,0:23:23.42:0,23,1039	0/0:8,0:8:18:0,18,245	0/1:22,0:22:47.78:202,0,48	0/1:1,18:22:0:0,0,0	./.	./.	1/1:6,21:28:15.05:309,15,0	1/1:3,17:23:3.95:111,4,0	0/0:21,0:21:9.22:0,9,1013	1/1:2,9:13:39.03:681,39,0	1/1:19,0:19:17.94:229,18,0	1/1:5,18:22:3:29,3,0	1/1:22,0:22:38.06:699,38,0	0/1:18,0:17:48.36:48,0,57	0/1:7,0:9:15.89:53,0,16	1/1:10,0:10:14.58:63,15,0	0/1:16,0:16:67:670,0,67	1/1:1,11:17:8.86:204,9,0	1/1:3,0:3:5.99:49,6,0
chr10	38756889	.	C	CACAG	2606.46	PASS	AB=0.983;AC=39;AF=0.722;AN=54;BaseQRankSum=5.507;DP=548;FS=0.000;HRun=0;HaplotypeScore=111.8702;InbreedingCoeff=0.0359;MQ=52.59;MQ0=13;MQRankSum=-2.344;QD=5.69;ReadPosRankSum=0.574;VQSLOD=1.9632;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:40,0:40:99:163,0,347	1/1:5,0:5:5.97:45,6,0	0/0:27,0:11:19.96:0,20,208	0/0:24,0:13:17.18:0,17,193	1/1:14,0:14:5.52:26,6,0	0/1:24,0:23:65.23:160,0,65	0/1:33,0:34:33.66:374,0,34	1/1:25,0:24:43.02:281,43,0	0/1:24,0:24:36.20:61,0,36	0/1:22,0:25:99:100,0,296	0/1:8,0:7:14.52:15,0,40	1/1:25,0:20:8:76,8,0	./.	1/1:13,0:13:2.99:23,3,0	1/1:23,0:24:2.56:18,3,0	1/1:21,4:25:15.04:247,15,0	1/1:26,0:24:15.81:124,16,0	0/0:20,0:20:38.47:0,38,355	1/1:12,1:12:0.93:259,1,0	1/1:19,0:19:5.72:36,6,0	1/1:18,0:18:6.02:97,6,0	0/1:18,0:18:13.95:120,0,14	0/1:20,0:19:2.61:32,0,3	1/1:12,0:12:3.47:26,3,0	0/1:11,0:10:4.17:110,0,4	1/1:11,0:12:4.05:239,4,0	1/1:15,0:15:9.48:102,9,0	1/1:5,0:4:5.92:32,6,0
chr10	38756933	.	G	GCCTGTAATCTGATAC	1768.49	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=4.577;DP=669;FS=8.575;HRun=0;HaplotypeScore=242.6232;InbreedingCoeff=0.8478;MQ=68.29;MQ0=20;MQRankSum=-6.500;QD=26.01;ReadPosRankSum=-3.401;VQSLOD=0.7823;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:39:74.86:0,75,2579	0/0:11,0:11:23.93:0,24,1034	0/0:45,0:24:58.91:0,59,1815	0/0:60,0:25:49.52:0,50,1483	0/0:21,0:21:42.14:0,42,1837	0/0:27,0:27:66.21:0,66,2765	0/0:36,0:36:96.06:0,96,3744	0/0:42,0:41:99:0,115,3957	0/0:21,0:21:48.16:0,48,1803	0/0:24,0:24:69.19:0,69,2220	0/0:12,0:12:33.11:0,33,1269	1/1:24,11:32:3.20:1207,3,0	0/0:11,0:11:18.06:0,18,743	0/0:15,0:15:30.10:0,30,1241	0/0:28,0:28:38.76:0,39,1668	0/0:19,0:19:39.13:0,39,1199	0/0:31,0:31:60.60:0,61,2230	0/0:20,0:20:58.92:0,59,1762	0/0:20,0:20:55.33:0,55,1845	0/0:11,0:11:21.07:0,21,881	0/0:26,0:26:32.93:0,33,1273	0/0:12,0:12:17.57:0,18,594	1/1:13,5:20:17.93:508,18,0	1/1:5,6:12:2.85:173,3,0	0/0:16,0:15:36.12:0,36,1403	0/0:20,0:20:58.97:0,59,2224	0/0:18,0:18:36.59:0,37,1418	0/0:15,0:12:19.36:0,19,701
chr10	38757539	.	TAC	T	616.68	PASS	AB=1.000;AC=22;AF=0.407;AN=54;BaseQRankSum=-0.051;DP=371;FS=2.570;HRun=0;HaplotypeScore=60.7480;InbreedingCoeff=0.3785;MQ=61.98;MQ0=12;MQRankSum=2.553;QD=2.83;ReadPosRankSum=4.233;VQSLOD=1.0644;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:17,0:17:3.56:4,0,116	1/1:2,0:2:5.99:49,6,0	0/0:17,0:13:5.91:0,6,45	0/1:18,0:14:0:0,0,0	./.	1/1:10,0:9:11.69:83,12,0	1/1:17,0:16:11.88:82,12,0	0/1:21,0:19:7.94:8,0,49	0/1:8,0:8:12.99:40,0,13	0/1:10,0:9:4.03:4,0,94	0/0:10,0:10:11.97:0,12,96	0/0:10,0:10:11.06:0,11,64	0/0:9,0:9:4.17:0,4,20	1/1:11,0:10:2.78:24,3,0	1/1:17,0:17:6.06:69,6,0	1/1:14,0:13:17.96:146,18,0	0/1:26,0:26:0.31:216,0,0	0/0:12,0:12:23.88:0,24,184	0/1:16,0:15:5.69:6,0,116	0/0:10,0:10:17.94:0,18,141	0/1:25,0:23:0.60:1,0,125	1/1:6,0:6:5.99:49,6,0	0/0:4,0:3:2.94:0,3,18	0/0:19,0:18:10.86:0,11,86	0/0:9,0:8:2.99:0,3,24	0/0:17,0:15:26.76:0,27,201	0/0:20,0:20:32.57:0,33,255	0/0:4,0:3:5.95:0,6,64
chr10	38757747	.	A	AG	2308.44	PASS	AB=0.796;AC=29;AF=0.518;AN=56;BaseQRankSum=-3.488;DP=436;FS=14.026;HRun=0;HaplotypeScore=60.0451;InbreedingCoeff=-0.0327;MQ=47.63;MQ0=29;MQRankSum=4.653;QD=7.00;ReadPosRankSum=-0.673;VQSLOD=1.9346;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:25:41.63:0,42,350	1/1:2,0:4:8.41:63,8,0	0/1:17,0:4:1.23:1,0,41	0/1:34,0:13:11.20:15,0,11	0/1:11,1:14:8.30:145,0,8	0/0:8,0:8:17.77:0,18,124	0/0:13,0:12:27.30:0,27,161	0/1:15,21:36:17.65:406,0,18	1/1:4,0:6:10.41:86,10,0	0/0:19,0:17:47.14:0,47,306	0/0:22,0:22:60.56:0,61,485	0/1:9,2:10:18.19:110,0,18	0/1:15,0:17:47.14:143,0,47	0/1:2,0:10:8.73:14,0,9	0/1:14,1:15:4.98:168,0,5	0/1:6,3:11:14.41:62,0,14	0/1:10,1:16:8.47:65,0,8	0/0:17,0:13:31.50:0,31,245	0/1:5,0:12:20.89:109,0,21	0/1:11,0:12:23.65:124,0,24	1/1:5,0:5:10.54:71,11,0	1/1:4,4:11:2.77:101,3,0	0/1:4,9:13:3.12:95,0,3	1/1:11,2:12:21.98:148,22,0	0/1:11,0:11:57.75:63,0,58	1/1:9,1:15:3.10:244,3,0	0/1:18,0:14:41.80:149,0,42	1/1:8,0:8:14.61:99,15,0
chr10	38758574	.	G	GACACAC	4308.93	PASS	AB=0.922;AC=29;AF=0.518;AN=56;BaseQRankSum=0.196;DP=765;FS=7.841;HRun=0;HaplotypeScore=221.5091;InbreedingCoeff=0.2805;MQ=58.31;MQ0=6;MQRankSum=1.889;QD=8.30;ReadPosRankSum=-5.257;VQSLOD=1.5601;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:47.80:0,48,608	1/1:19,0:19:26.40:144,26,0	0/0:36,0:14:29.89:0,30,436	0/0:54,0:20:35.10:0,35,531	0/1:21,0:21:50.51:132,0,51	0/0:29,0:29:5.75:0,6,341	0/0:33,0:33:48.42:0,48,762	1/1:40,0:40:66.61:767,67,0	1/1:27,0:27:24.32:270,24,0	0/0:29,0:29:81.21:0,81,1427	0/0:14,0:14:18.03:0,18,257	0/1:28,0:28:27.48:27,0,260	0/1:24,0:24:40.78:183,0,41	1/1:22,0:22:40.25:231,40,0	1/1:32,0:32:16.86:202,17,0	0/1:26,0:26:63.44:153,0,63	1/1:36,0:37:19.56:316,20,0	0/0:11,0:11:15.03:0,15,229	1/1:3,8:14:12.50:317,13,0	0/1:6,6:15:0.27:19,0,0	0/1:50,0:48:39.70:298,0,40	0/1:18,0:19:43.99:44,0,83	0/1:17,0:17:0.86:1,0,134	0/1:38,0:38:64.12:64,0,285	0/1:22,0:22:10.04:131,0,10	1/1:15,6:29:38.48:514,38,0	0/1:6,15:26:2.01:269,0,2	1/1:4,6:12:9.03:225,9,0
chr10	38760110	.	G	GA	2593.12	PASS	AB=0.741;AC=29;AF=0.518;AN=56;BaseQRankSum=-2.234;DP=424;FS=5.917;HRun=11;HaplotypeScore=85.5368;InbreedingCoeff=0.4644;MQ=62.49;MQ0=8;MQRankSum=-0.644;QD=12.06;ReadPosRankSum=-2.573;VQSLOD=2.8919;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:28:37.32:0,37,382	1/1:5,2:7:9.01:86,9,0	0/0:33,0:12:2.46:0,2,26	0/0:29,0:12:5.75:0,6,44	0/1:14,3:17:5.24:123,0,5	0/0:19,0:20:36.71:0,37,244	0/0:11,0:11:20.89:0,21,159	1/1:6,8:13:29.84:276,30,0	0/1:7,3:10:8.22:95,0,8	0/0:15,1:17:10.35:0,10,246	0/0:16,0:17:32.82:0,33,252	0/0:12,0:12:8.24:0,8,120	1/1:3,7:10:21.02:205,21,0	1/1:8,12:20:29.96:282,30,0	1/1:3,6:9:0.72:167,1,0	0/1:5,5:12:5.32:118,0,5	1/1:5,15:20:1.70:335,2,0	0/0:19,0:19:35.78:0,36,276	1/1:11,6:17:32.89:287,33,0	0/1:4,4:8:11.13:67,0,11	0/1:8,3:11:28.45:94,0,28	1/1:5,8:13:14.99:142,15,0	0/0:9,0:9:16.03:0,16,134	0/0:14,0:14:26.27:0,26,201	1/1:5,4:9:4.60:59,5,0	1/1:6,9:15:9.58:263,10,0	1/1:11,5:17:0.57:149,1,0	1/1:5,0:5:0.02:32,0,0
chr10	38760126	.	G	GA	540.61	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-0.335;DP=395;FS=2.939;HRun=9;HaplotypeScore=87.4883;InbreedingCoeff=0.9103;MQ=67.22;MQ0=0;MQRankSum=-1.346;QD=14.23;ReadPosRankSum=0.549;VQSLOD=3.9050;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:56.97:0,57,494	0/0:8,0:8:14.19:0,14,105	0/0:22,0:11:14.26:0,14,113	0/0:21,0:14:9.85:0,10,84	0/0:15,1:15:20.74:0,21,206	0/0:19,0:19:53.93:0,54,455	0/0:13,0:13:29.98:0,30,260	0/0:17,0:17:49.18:0,49,410	0/0:8,0:8:23.75:0,24,183	0/0:19,0:19:47.98:0,48,417	0/0:17,0:17:41.98:0,42,362	1/1:11,2:13:20.98:199,21,0	0/0:9,0:9:17.70:0,18,140	0/0:16,0:16:35.15:0,35,276	0/0:9,0:9:17.98:0,18,155	0/0:8,0:8:23.84:0,24,197	0/0:19,0:18:47.98:0,48,412	0/0:15,0:15:35.93:0,36,303	0/0:25,0:25:62.89:0,63,530	0/0:8,0:8:14.86:0,15,119	0/0:5,0:5:12:0,12,104	0/0:12,0:12:32.15:0,32,253	1/1:5,4:9:19.89:166,20,0	1/1:5,10:15:30.04:316,30,0	0/0:8,0:8:20.67:0,21,176	0/0:13,0:13:26.67:0,27,229	0/0:15,0:15:38.83:0,39,324	0/0:6,0:6:6.74:0,7,92
chr10	38760157	.	C	CTT	4370.25	PASS	AB=0.758;AC=49;AF=0.875;AN=56;BaseQRankSum=-1.968;DP=383;FS=2.108;HRun=15;HaplotypeScore=94.3117;InbreedingCoeff=-0.0294;MQ=65.29;MQ0=4;MQRankSum=-2.128;QD=11.41;ReadPosRankSum=0.476;VQSLOD=4.0833;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,1:25:6.04:100,6,0	1/1:2,1:9:18.03:179,18,0	0/1:18,0:10:2.43:2,0,19	0/1:13,0:10:7.65:8,0,35	1/1:5,2:18:35.41:348,35,0	1/1:6,0:16:3.39:61,3,0	0/1:8,1:14:4.08:108,0,4	1/1:13,9:22:44.85:476,45,0	0/1:3,1:8:1.17:83,0,1	1/1:9,0:16:19.63:93,20,0	1/1:5,0:16:16.72:59,17,0	0/1:5,1:8:28.63:40,0,29	1/1:4,0:5:8.63:53,9,0	1/1:13,1:14:14.06:112,14,0	1/1:4,1:5:1.69:60,2,0	1/1:9,0:10:19.76:130,20,0	1/1:13,3:18:31.72:314,32,0	0/1:10,0:18:9.51:82,0,10	0/1:10,9:22:18.77:383,0,19	1/1:4,5:9:15.04:175,15,0	1/1:2,3:5:11.52:122,12,0	1/1:6,1:10:21.04:214,21,0	1/1:4,0:5:5.34:29,5,0	1/1:7,1:11:8.22:55,8,0	1/1:2,7:14:26.45:309,26,0	1/1:7,3:14:30.12:271,30,0	1/1:8,5:15:28.56:266,29,0	1/1:2,8:10:20.55:237,21,0
chr10	38760477	.	T	TAA	6665.62	PASS	AB=0.583;AC=43;AF=0.768;AN=56;BaseQRankSum=-2.060;DP=409;FS=3.133;HRun=11;HaplotypeScore=53.4523;InbreedingCoeff=0.7728;MQ=64.04;MQ0=8;MQRankSum=-1.052;QD=23.06;ReadPosRankSum=0.375;VQSLOD=4.1774;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:32:56.71:0,57,589	1/1:0,11:11:27.09:391,27,0	0/0:14,0:8:6.02:0,6,113	0/0:9,0:7:2.10:0,2,61	1/1:6,10:16:23.57:313,24,0	1/1:2,1:19:32.87:119,33,0	0/1:4,0:14:29.58:49,0,30	1/1:9,11:20:39.88:448,40,0	1/1:3,5:8:9.03:130,9,0	0/0:23,0:23:57.01:0,57,542	0/0:19,0:19:48.39:0,48,452	1/1:2,5:7:20.98:258,21,0	1/1:4,7:12:23.57:311,24,0	1/1:4,4:8:8.99:107,9,0	1/1:2,12:14:26.58:356,27,0	1/1:2,12:14:33.11:478,33,0	1/1:4,20:25:57.19:815,57,0	0/0:20,0:19:45.92:0,46,438	1/1:8,9:16:27.48:326,27,0	1/1:2,10:11:27.09:391,27,0	1/1:1,4:5:6.02:87,6,0	1/1:0,3:3:6.02:87,6,0	1/1:2,6:7:18.06:261,18,0	1/1:0,9:9:15.05:217,15,0	1/1:3,11:14:24.08:348,24,0	1/1:5,11:17:28.75:375,29,0	1/1:4,13:17:33.11:478,33,0	1/1:1,10:12:25.94:321,26,0
chr10	38761297	.	T	TAAC	1657.38	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-3.766;DP=548;FS=0.000;HRun=0;HaplotypeScore=74.5398;InbreedingCoeff=0.9877;MQ=70.00;MQ0=0;MQRankSum=-0.380;QD=36.83;ReadPosRankSum=1.968;VQSLOD=4.3165;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:51.11:0,51,687	0/0:9,0:9:27.03:0,27,334	0/0:21,0:21:36.03:0,36,431	0/0:13,0:12:13.21:0,13,135	0/0:19,0:19:49.98:0,50,702	0/0:26,0:26:63.15:0,63,847	0/0:11,0:11:21.04:0,21,271	0/0:50,0:50:84.23:0,84,1116	0/0:21,0:21:48.15:0,48,686	0/0:26,0:26:63.21:0,63,911	0/0:18,0:17:36.10:0,36,492	1/1:3,11:14:24.08:498,24,0	0/0:18,0:18:39.12:0,39,554	0/0:16,0:16:39.09:0,39,516	0/0:16,0:16:39.12:0,39,555	0/0:16,0:16:39.13:0,39,574	0/0:16,0:16:33.02:0,33,437	0/0:15,0:15:36.06:0,36,468	0/0:19,0:19:42.12:0,42,580	0/0:21,0:21:45.11:0,45,603	0/0:23,0:23:51.14:0,51,709	0/0:15,0:15:30.08:0,30,421	1/1:5,10:15:24.08:493,24,0	1/1:1,15:16:39.13:809,39,0	0/0:14,0:14:36.09:0,36,490	0/0:27,0:27:66.22:0,66,971	0/0:36,0:36:90.30:0,90,1318	0/0:14,0:14:42.07:0,42,519
chr10	38762108	.	A	AACACAC	6325.55	PASS	AB=0.789;AC=38;AF=0.704;AN=54;BaseQRankSum=6.128;DP=632;FS=1.765;HRun=0;HaplotypeScore=199.2807;InbreedingCoeff=0.8123;MQ=56.18;MQ0=12;MQRankSum=-5.973;QD=15.13;ReadPosRankSum=-3.163;VQSLOD=3.6117;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:51:79.52:0,80,1541	1/1:8,0:7:2.04:6,2,0	0/0:26,0:15:3.01:0,3,62	./.	0/1:16,0:15:0:1,0,0	0/0:26,0:26:48.08:0,48,850	0/0:21,0:24:50.87:0,51,770	1/1:25,0:24:32.96:511,33,0	1/1:23,0:22:13.62:334,14,0	0/0:22,0:23:24.82:0,25,414	0/0:18,0:21:30.10:0,30,579	1/1:9,12:24:20:583,20,0	1/1:25,0:25:25.26:587,25,0	1/1:15,0:22:8.18:243,8,0	1/1:12,0:20:9.03:235,9,0	1/1:18,0:16:17.43:348,17,0	1/1:27,0:26:34.91:528,35,0	0/0:18,0:17:21.07:0,21,429	1/1:19,0:19:27.01:509,27,0	1/1:26,0:26:12.01:216,12,0	1/1:31,0:29:11.95:104,12,0	1/1:26,0:25:11.79:139,12,0	0/1:3,8:11:0:0,0,0	1/1:27,5:34:33.57:757,34,0	1/1:14,0:14:5.99:50,6,0	1/1:22,0:20:27.54:494,28,0	1/1:8,0:17:21.06:500,21,0	1/1:8,0:9:9.02:179,9,0
chr10	38762859	.	GT	G	1260.18	PASS	AB=0.720;AC=20;AF=0.357;AN=56;BaseQRankSum=0.234;DP=491;FS=2.095;HRun=15;HaplotypeScore=73.3252;InbreedingCoeff=0.2625;MQ=65.49;MQ0=0;MQRankSum=0.885;QD=5.63;ReadPosRankSum=3.831;VQSLOD=2.7904;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,2:31:24.54:0,25,416	1/1:3,2:5:2.92:19,3,0	0/1:21,1:15:26.54:27,0,34	0/0:25,0:16:0.53:0,1,7	0/1:6,11:17:17.41:140,0,17	0/1:9,14:23:6.67:209,0,7	0/1:7,7:14:1.58:102,0,2	0/0:10,0:25:32.01:0,32,258	0/1:9,6:15:2.71:110,0,3	0/0:27,0:29:57.26:0,57,424	0/1:21,4:30:17.61:18,0,324	0/1:2,1:2:12.75:13,0,13	0/1:5,6:12:4.13:93,0,4	0/1:11,5:16:23.56:99,0,24	1/1:5,9:15:31.49:197,31,0	1/1:7,4:13:18.76:104,19,0	1/1:11,12:23:15.87:223,16,0	0/0:5,0:8:14.39:0,14,79	0/0:8,0:13:12.72:0,13,60	0/0:10,0:21:26.50:0,27,133	0/0:6,0:10:11.32:0,11,64	1/1:5,3:8:8.80:57,9,0	0/1:2,0:8:3.87:24,0,4	0/0:1,0:4:0.79:0,1,21	0/0:15,0:24:53.14:0,53,315	0/0:14,0:19:22.69:0,23,128	0/0:23,0:25:54.26:0,54,316	0/0:8,0:28:42.27:0,42,228
chr10	38762887	.	A	AT	333.34	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=1.850;DP=427;FS=16.377;HRun=8;HaplotypeScore=60.8905;InbreedingCoeff=0.7220;MQ=57.19;MQ0=5;MQRankSum=-3.634;QD=9.26;ReadPosRankSum=-0.623;VQSLOD=0.3793;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:27:65.89:0,66,595	0/0:7,0:7:18:0,18,160	0/1:14,0:7:16.84:17,0,70	0/0:12,0:6:2.93:0,3,27	0/0:12,0:12:24:0,24,219	0/0:23,0:23:44.97:0,45,407	0/0:12,0:12:24:0,24,219	0/0:30,0:27:66.03:0,66,603	0/0:12,0:12:27:0,27,247	0/0:22,0:22:51.02:0,51,467	0/0:21,0:21:35.96:0,36,324	1/1:2,5:6:12.04:138,12,0	0/0:14,0:14:29.98:0,30,274	0/0:18,0:18:35.99:0,36,324	0/0:14,0:14:20.98:0,21,188	0/0:14,0:14:33.01:0,33,302	0/0:16,0:16:20.97:0,21,192	0/0:14,0:14:29:0,29,241	0/0:16,0:16:44.05:0,44,390	0/0:11,0:11:21.01:0,21,192	0/0:5,0:5:6:0,6,55	0/0:5,0:5:11.99:0,12,105	1/1:4,6:10:20.98:213,21,0	1/1:1,4:5:9.50:105,9,0	0/0:18,0:17:47.76:0,48,422	0/0:23,0:22:48.01:0,48,439	0/0:19,0:19:42.02:0,42,384	0/0:24,0:24:30.01:0,30,274
chr10	38763967	.	A	AT	7305.12	PASS	AB=1.000;AC=41;AF=0.732;AN=56;BaseQRankSum=4.646;DP=452;FS=2.759;HRun=10;HaplotypeScore=75.4312;InbreedingCoeff=0.7863;MQ=75.22;MQ0=2;MQRankSum=-3.678;QD=21.11;ReadPosRankSum=-1.003;VQSLOD=5.4406;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,2:25:27.92:0,28,436	1/1:7,2:9:6.52:148,7,0	0/0:17,0:11:11.85:0,12,90	0/1:21,0:15:10.89:11,0,15	1/1:8,8:16:33.08:349,33,0	0/0:9,0:9:17.36:0,17,167	0/0:7,0:8:20.01:0,20,154	1/1:11,27:38:65.32:860,65,0	1/1:5,9:14:38.68:383,39,0	0/0:10,0:10:20.97:0,21,172	0/0:13,0:13:32.94:0,33,269	1/1:5,8:13:2.42:231,2,0	1/1:5,4:9:18.04:185,18,0	1/1:9,7:16:36.04:367,36,0	1/1:8,9:16:39.10:412,39,0	1/1:15,9:24:32.96:543,33,0	1/1:13,12:25:72.18:764,72,0	0/0:24,0:24:65.86:0,66,536	1/1:8,7:16:17.23:359,17,0	1/1:13,8:22:2.92:409,3,0	1/1:9,3:12:9.49:96,9,0	1/1:2,2:4:12.03:127,12,0	1/1:2,8:11:24.06:256,24,0	1/1:2,11:13:30.08:320,30,0	1/1:11,4:16:39:386,39,0	1/1:7,7:15:11.30:303,11,0	1/1:18,16:34:54.34:780,54,0	1/1:0,0:1:2.84:14,3,0
chr10	38763981	.	TA	T	5978.26	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=9.214;DP=462;FS=1.283;HRun=9;HaplotypeScore=80.9218;InbreedingCoeff=0.9235;MQ=76.77;MQ0=2;MQRankSum=-4.968;QD=21.66;ReadPosRankSum=0.167;VQSLOD=5.3976;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:72.18:0,72,801	1/1:4,3:7:17.98:159,18,0	0/0:20,2:13:7.55:0,8,93	0/0:24,0:15:21.28:0,21,141	1/1:6,15:21:59.92:525,60,0	0/0:14,0:14:39.05:0,39,415	0/0:12,0:12:27.06:0,27,301	1/1:10,26:36:95.49:842,95,0	1/1:7,11:18:44.97:399,45,0	0/0:10,0:10:30.09:0,30,346	0/0:17,0:17:48.12:0,48,536	0/0:11,0:11:30.09:0,30,346	1/1:2,5:7:17.98:158,18,0	1/1:9,8:17:44.54:379,45,0	1/1:7,7:14:38.95:340,39,0	1/1:15,4:19:38.99:351,39,0	1/1:20,6:26:53.95:478,54,0	0/0:27,0:26:72.18:0,72,808	1/1:8,5:14:29.37:251,29,0	1/1:14,9:23:54:490,54,0	1/1:6,0:6:6:55,6,0	1/1:4,3:7:21.01:191,21,0	0/0:14,0:14:36.04:0,36,382	0/0:11,0:11:21.05:0,21,231	1/1:8,4:12:33:296,33,0	1/1:6,8:14:1.39:264,1,0	1/1:14,19:33:77.97:749,78,0	1/1:1,1:2:5.99:51,6,0
chr10	38764464	.	C	CTTTTT	5666.19	PASS	AB=0.889;AC=41;AF=0.732;AN=56;BaseQRankSum=1.875;DP=501;FS=9.748;HRun=16;HaplotypeScore=110.4597;InbreedingCoeff=0.7334;MQ=57.40;MQ0=14;MQRankSum=-6.008;QD=15.92;ReadPosRankSum=-6.107;VQSLOD=-0.7167;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:36.88:0,37,685	1/1:8,0:10:16.86:209,17,0	1/1:8,0:5:1.25:4,1,0	0/0:20,0:16:6.96:0,7,74	1/1:6,14:40:36.48:525,36,0	0/0:17,0:17:23.05:0,23,319	0/0:11,0:16:21.56:0,22,206	1/1:17,8:32:47.82:578,48,0	1/1:2,7:16:9.97:192,10,0	0/0:17,0:19:10.65:0,11,192	0/0:17,0:18:4.78:0,5,60	1/1:9,0:9:20.42:265,20,0	1/1:13,0:14:21.01:301,21,0	1/1:7,0:17:5.97:60,6,0	1/1:5,1:19:7.82:105,8,0	1/1:5,3:13:5.82:123,6,0	1/1:8,6:15:9.35:103,9,0	0/0:16,0:17:26.73:0,27,326	1/1:13,6:23:48.03:811,48,0	1/1:5,0:21:9.03:149,9,0	1/1:4,0:4:6.02:85,6,0	1/1:3,0:18:16.45:145,16,0	1/1:16,0:16:29.04:384,29,0	1/1:16,0:15:18.52:256,19,0	1/1:0,2:7:9.03:152,9,0	1/1:22,1:23:43.46:635,43,0	1/1:19,0:18:29.97:433,30,0	0/1:7,0:7:29.32:151,0,29
chr10	38765014	.	GA	G	1028.70	PASS	AB=0.695;AC=21;AF=0.375;AN=56;BaseQRankSum=3.574;DP=393;FS=6.646;HRun=13;HaplotypeScore=54.0807;InbreedingCoeff=0.7292;MQ=62.95;MQ0=7;MQRankSum=1.755;QD=7.56;ReadPosRankSum=2.674;VQSLOD=2.1173;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:35:49.09:0,49,273	1/1:0,1:1:2.98:22,3,0	0/0:21,2:9:8.91:0,9,65	0/1:25,1:8:5.16:5,0,60	0/0:6,0:6:14.62:0,15,127	0/0:2,0:14:17.17:0,17,92	0/0:8,0:10:22.06:0,22,114	0/0:29,0:29:69.09:0,69,638	1/1:3,8:11:29.66:208,30,0	0/0:11,0:18:28.76:0,29,199	0/0:5,0:13:22.25:0,22,109	1/1:1,0:13:25:75,25,0	0/1:1,7:8:5.41:110,0,5	1/1:1,6:7:17.90:131,18,0	0/1:3,7:10:11.25:91,0,11	1/1:1,6:7:14.91:109,15,0	1/1:4,20:23:38.77:284,39,0	0/0:7,0:17:20.01:0,20,105	0/0:12,1:12:5.13:0,5,212	0/0:13,0:13:30:0,30,274	0/0:9,0:9:21.47:0,21,196	1/1:0,5:5:14.91:109,15,0	1/1:1,0:9:9.76:29,10,0	1/1:1,0:14:20.14:58,20,0	0/0:13,0:13:11.62:0,12,267	0/0:8,0:8:12.02:0,12,117	0/0:14,0:15:39.37:0,39,365	0/0:18,0:17:19.82:0,20,282
chr10	38765096	.	C	CTTAT	3656.91	PASS	AB=0.898;AC=38;AF=0.760;AN=50;BaseQRankSum=-0.834;DP=291;FS=22.051;HRun=0;HaplotypeScore=55.7976;InbreedingCoeff=0.5583;MQ=63.83;MQ0=0;MQRankSum=-1.488;QD=16.85;ReadPosRankSum=-1.191;VQSLOD=1.1669;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:27.09:0,27,426	1/1:1,0:1:3:27,3,0	./.	0/0:5,0:4:3.01:0,3,47	1/1:10,0:14:12.04:208,12,0	1/1:10,8:18:30.09:666,30,0	1/1:5,1:6:3.01:71,3,0	0/1:26,7:33:14.34:359,0,14	1/1:3,0:4:9.03:169,9,0	0/0:12,0:12:21.07:0,21,332	0/0:14,0:14:21.06:0,21,309	1/1:7,0:8:12.04:241,12,0	1/1:7,0:7:5.99:50,6,0	1/1:4,0:5:9.02:120,9,0	1/1:5,0:6:9.03:174,9,0	1/1:5,0:6:6.02:90,6,0	1/1:13,0:16:9:126,9,0	0/0:18,0:18:39.13:0,39,613	1/1:10,4:15:12.04:286,12,0	1/1:6,2:8:6.02:143,6,0	./.	./.	0/1:9,0:9:0:1,0,0	1/1:7,0:7:6:90,6,0	1/1:9,0:11:3.01:52,3,0	1/1:7,1:8:3.01:71,3,0	1/1:6,5:12:9.03:214,9,0	1/1:8,9:21:21.07:499,21,0
chr10	38766108	.	T	TA	9545.19	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-0.288;DP=436;FS=6.526;HRun=4;HaplotypeScore=59.1682;InbreedingCoeff=0.9723;MQ=88.58;MQ0=0;MQRankSum=-2.889;QD=33.03;ReadPosRankSum=3.060;VQSLOD=5.5056;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:63.18:0,63,711	1/1:0,4:4:8.93:123,9,0	0/0:17,0:17:47.83:0,48,487	0/0:18,0:18:27.60:0,28,358	1/1:1,17:19:54.12:705,54,0	0/0:15,0:15:36.10:0,36,408	0/0:19,0:19:51.15:0,51,578	1/1:2,16:18:48.15:643,48,0	1/1:1,17:18:51.17:698,51,0	0/0:22,0:22:63.16:0,63,704	0/0:11,0:11:26.81:0,27,284	1/1:2,10:12:27.09:369,27,0	1/1:1,7:8:21.04:267,21,0	1/1:2,12:14:36.12:492,36,0	1/1:3,8:11:7.73:233,8,0	1/1:1,16:17:45.15:615,45,0	1/1:3,23:26:45.15:615,45,0	0/0:17,0:17:42.06:0,42,447	1/1:2,11:13:33.08:418,33,0	1/1:1,7:8:21.03:266,21,0	1/1:1,25:26:63.21:861,63,0	1/1:1,10:11:30.10:410,30,0	1/1:2,5:7:15.02:185,15,0	1/1:0,21:21:51.13:675,51,0	1/1:0,7:7:21.07:287,21,0	1/1:2,14:16:39.13:533,39,0	1/1:2,19:21:51.17:697,51,0	1/1:0,12:12:33.11:451,33,0
chr10	38766844	.	G	GAA	4302.21	PASS	AB=0.698;AC=43;AF=0.768;AN=56;BaseQRankSum=1.770;DP=478;FS=7.535;HRun=12;HaplotypeScore=61.5218;InbreedingCoeff=0.6097;MQ=58.20;MQ0=8;MQRankSum=-0.841;QD=11.15;ReadPosRankSum=-0.718;VQSLOD=2.5547;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:24:16.35:0,16,403	1/1:1,3:4:3.01:42,3,0	0/0:8,0:4:4.64:0,5,37	0/1:13,0:10:7.07:7,0,58	1/1:9,13:25:35.55:427,36,0	0/1:3,0:18:7.29:40,0,7	1/1:3,0:16:20.47:89,20,0	1/1:12,0:39:63.35:468,63,0	1/1:3,14:17:21.07:295,21,0	0/0:18,0:18:17.32:0,17,187	0/0:20,0:20:44.95:0,45,407	1/1:7,15:22:11.83:141,12,0	1/1:6,7:14:11.71:135,12,0	1/1:3,9:12:6.02:84,6,0	1/1:4,9:14:11.77:167,12,0	1/1:3,11:15:9.03:119,9,0	1/1:5,17:27:43.08:457,43,0	0/0:21,0:21:45.80:0,46,408	1/1:4,0:14:20.93:144,21,0	1/1:6,0:17:26.64:222,27,0	1/1:5,0:5:8.93:65,9,0	1/1:1,6:8:14.54:177,15,0	1/1:5,11:17:32.48:386,32,0	0/1:2,9:11:16.05:75,0,16	1/1:2,0:12:18.03:172,18,0	1/1:4,0:23:37.91:302,38,0	1/1:6,1:23:12.50:129,12,0	1/1:2,1:13:15.03:157,15,0
chr10	38767011	.	T	TA	792.46	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-3.768;DP=443;FS=0.743;HRun=8;HaplotypeScore=41.3793;InbreedingCoeff=0.9574;MQ=68.25;MQ0=0;MQRankSum=-0.294;QD=23.31;ReadPosRankSum=0.813;VQSLOD=3.8968;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:63:0,63,569	0/0:5,0:5:12.01:0,12,110	0/0:6,0:6:10.82:0,11,87	0/0:7,0:8:12:0,12,110	0/0:24,0:24:63.02:0,63,577	0/0:17,0:17:42.01:0,42,384	0/0:10,0:10:21:0,21,192	0/0:29,0:29:74.94:0,75,670	0/0:19,0:19:48.02:0,48,439	0/0:21,0:21:27.66:0,28,438	0/0:19,0:19:51.02:0,51,466	1/1:1,12:13:30.09:346,30,0	0/0:11,0:11:30.02:0,30,274	0/0:11,0:11:30.02:0,30,275	0/0:21,0:21:54.03:0,54,494	0/0:15,0:15:33.01:0,33,302	0/0:32,0:32:84.04:0,84,769	0/0:21,0:21:51:0,51,460	0/0:16,0:16:42.02:0,42,384	0/0:14,0:14:33.01:0,33,302	0/0:10,0:10:24.01:0,24,220	0/0:9,0:9:18:0,18,164	1/1:2,11:13:26.91:311,27,0	1/1:0,8:8:24.07:277,24,0	0/0:11,0:11:33.02:0,33,302	0/0:24,0:24:69.04:0,69,631	0/0:22,0:22:57.02:0,57,521	0/0:11,0:11:30.02:0,30,275
chr10	38767855	.	GGT	G	6739.29	PASS	AB=0.941;AC=33;AF=0.589;AN=56;BaseQRankSum=0.262;DP=631;FS=3.390;HRun=0;HaplotypeScore=114.1725;InbreedingCoeff=0.9229;MQ=65.23;MQ0=11;MQRankSum=0.229;QD=20.24;ReadPosRankSum=2.532;VQSLOD=5.1931;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:84.21:0,84,1187	1/1:9,0:9:26.55:239,27,0	0/0:41,0:22:41.96:0,42,642	0/0:33,0:14:39.08:0,39,552	1/1:29,1:28:65.42:628,65,0	0/0:14,0:14:36.11:0,36,537	0/0:23,0:23:60.03:0,60,870	1/1:27,2:28:53.08:690,53,0	1/1:18,2:20:44.27:340,44,0	0/0:28,0:28:78.22:0,78,1215	0/0:18,0:17:32.32:0,32,580	0/0:28,0:28:69.40:0,69,876	1/1:21,0:20:21.39:289,21,0	1/1:12,1:13:19.88:196,20,0	1/1:24,0:24:53.63:524,54,0	1/1:17,0:17:34.66:435,35,0	1/1:33,1:33:56.29:600,56,0	0/0:19,0:19:51.13:0,51,717	0/1:15,1:15:34.93:303,0,35	1/1:17,0:16:38.01:331,38,0	1/1:28,1:25:40.20:536,40,0	1/1:18,0:17:37.78:344,38,0	0/0:22,0:21:47.89:0,48,523	0/0:40,0:39:92.92:0,93,1065	1/1:16,0:15:31.78:320,32,0	1/1:4,11:15:32.26:328,32,0	1/1:18,0:18:18:407,18,0	1/1:7,0:7:20.85:229,21,0
chr10	38767861	.	T	TG	3191.89	PASS	AB=0.920;AC=28;AF=0.500;AN=56;BaseQRankSum=6.526;DP=648;FS=13.453;HRun=1;HaplotypeScore=123.1517;InbreedingCoeff=0.5769;MQ=60.51;MQ0=15;MQRankSum=1.470;QD=9.07;ReadPosRankSum=1.965;VQSLOD=0.1244;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:34:87.02:0,87,1085	1/1:7,4:10:19.88:237,20,0	0/0:37,0:18:54.07:0,54,634	0/0:33,0:14:42.13:0,42,528	1/1:25,6:29:20:348,20,0	0/0:15,0:15:36.11:0,36,453	0/0:24,0:24:63.20:0,63,808	0/1:31,0:30:99:168,0,118	1/1:15,5:20:34.61:284,35,0	0/0:28,0:28:84.04:0,84,1037	0/0:17,0:16:45.06:0,45,544	0/0:28,0:28:72.21:0,72,912	0/1:15,4:18:9.36:137,0,9	1/1:8,3:11:11.83:191,12,0	1/1:18,4:22:30.65:211,31,0	1/1:16,3:19:23.05:202,23,0	1/1:30,8:37:11.68:395,12,0	0/0:18,0:18:50.99:0,51,619	0/1:16,0:15:57.02:74,0,57	1/1:13,7:19:28.35:318,28,0	0/1:33,1:31:5.01:75,0,5	1/1:12,7:18:26.51:219,27,0	0/0:21,0:20:47.51:0,48,599	0/0:40,0:39:93.26:0,93,1177	1/1:13,4:16:19.83:229,20,0	0/1:14,2:15:55.96:110,0,56	0/1:16,4:20:21.95:120,0,22	1/1:5,2:7:9.21:86,9,0
chr10	38767863	.	TG	T	1422.79	PASS	AB=0.966;AC=26;AF=0.464;AN=56;BaseQRankSum=9.005;DP=648;FS=16.433;HRun=2;HaplotypeScore=128.3725;InbreedingCoeff=0.3877;MQ=60.32;MQ0=15;MQRankSum=0.702;QD=4.07;ReadPosRankSum=2.844;VQSLOD=-0.6827;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:34:80.86:0,81,957	1/1:11,0:10:12.56:93,13,0	0/0:39,0:19:48.11:0,48,592	0/0:33,0:14:42.12:0,42,516	0/1:32,0:29:1.70:177,0,2	0/0:15,0:15:36.02:0,36,420	0/0:22,0:23:61.78:0,62,659	0/1:23,6:28:99:180,0,122	1/1:20,0:20:17.52:91,18,0	0/0:29,0:29:63.29:0,63,961	0/0:17,0:16:36.29:0,36,391	0/0:29,0:29:65.15:0,65,634	0/1:18,1:18:41.93:83,0,42	1/1:10,0:10:3.84:69,4,0	1/1:20,1:21:3.29:41,3,0	1/1:20,0:20:7.50:124,7,0	0/1:34,2:35:16.43:215,0,16	0/0:18,0:18:47.83:0,48,508	0/1:16,0:15:1.75:2,0,77	1/1:19,1:19:17.22:153,17,0	0/1:35,0:32:25.57:34,0,26	1/1:19,0:18:11.07:100,11,0	0/0:20,1:20:28:0,28,207	0/0:39,0:38:77.76:0,78,589	1/1:18,0:17:8.86:102,9,0	0/1:17,0:16:49.02:77,0,49	0/1:20,0:20:37.02:37,0,40	1/1:7,0:7:4.86:35,5,0
chr10	38767864	.	G	GT	3076.74	PASS	AB=0.883;AC=26;AF=0.464;AN=56;BaseQRankSum=6.295;DP=652;FS=25.907;HRun=1;HaplotypeScore=126.5249;InbreedingCoeff=0.4117;MQ=60.08;MQ0=15;MQRankSum=-0.610;QD=8.82;ReadPosRankSum=3.103;VQSLOD=-0.1970;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,1:35:64.96:0,65,844	1/1:6,4:9:13.87:207,14,0	0/0:40,0:19:48.11:0,48,592	0/0:34,0:14:42.12:0,42,517	1/1:26,6:29:17.99:386,18,0	0/0:9,0:15:24.40:0,24,342	0/0:15,0:24:43.04:0,43,540	0/1:29,0:28:99:190,0,118	1/1:15,5:20:9.90:211,10,0	0/0:22,0:29:57.19:0,57,889	0/0:10,1:16:28.10:0,28,334	0/0:16,0:29:71.57:0,72,753	0/1:15,4:18:36.17:147,0,36	0/1:6,3:9:4.44:142,0,4	1/1:17,4:21:8.75:124,9,0	1/1:17,3:20:22.32:236,22,0	0/1:27,8:35:1.69:435,0,2	0/0:10,0:19:4.78:0,5,303	0/1:15,0:14:46.30:46,0,70	1/1:13,7:19:24.34:318,24,0	0/1:33,2:32:47.10:77,0,47	1/1:13,7:19:15.56:202,16,0	0/0:10,0:20:41.30:0,41,341	0/0:16,0:38:89.43:0,89,839	1/1:13,4:16:10.77:207,11,0	0/1:17,2:18:44.22:149,0,44	0/1:16,4:20:32.50:118,0,33	1/1:5,2:7:4.98:81,5,0
chr10	38768248	.	T	TA	5704.96	PASS	AB=0.715;AC=39;AF=0.696;AN=56;BaseQRankSum=-5.444;DP=487;FS=2.017;HRun=12;HaplotypeScore=51.4401;InbreedingCoeff=0.6833;MQ=72.49;MQ0=6;MQRankSum=-0.518;QD=16.39;ReadPosRankSum=-0.153;VQSLOD=5.7524;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:65.54:0,66,478	1/1:1,12:13:27.04:262,27,0	0/0:19,0:9:5.88:0,6,41	0/1:16,0:10:8.32:8,0,20	0/1:7,16:23:12.45:296,0,12	0/0:19,0:19:43.72:0,44,307	0/0:17,0:17:35.68:0,36,258	1/1:13,19:33:21.98:493,22,0	1/1:2,13:15:33.05:321,33,0	0/0:11,0:12:19.82:0,20,133	0/0:19,0:19:50.68:0,51,372	1/1:2,10:12:23.97:222,24,0	1/1:3,6:9:9.01:87,9,0	0/1:2,8:10:0.88:154,0,1	1/1:10,8:18:2.14:276,2,0	1/1:6,5:11:27.01:251,27,0	1/1:3,27:30:69.11:671,69,0	0/0:22,0:23:37.73:0,38,268	1/1:13,4:16:23.99:220,24,0	1/1:3,16:18:41.97:388,42,0	1/1:4,12:16:29.99:280,30,0	1/1:2,8:10:2.13:182,2,0	1/1:6,14:20:5.15:212,5,0	1/1:6,15:21:47.91:451,48,0	1/1:7,4:10:9.01:88,9,0	1/1:4,6:10:18.91:177,19,0	1/1:13,11:24:44.99:417,45,0	1/1:0,8:9:26.88:248,27,0
chr10	38768346	.	GAAAAA	G	5511.22	PASS	AB=0.715;AC=38;AF=0.679;AN=56;BaseQRankSum=8.226;DP=566;FS=16.851;HRun=17;HaplotypeScore=121.0855;InbreedingCoeff=0.6621;MQ=65.18;MQ0=16;MQRankSum=-8.577;QD=14.47;ReadPosRankSum=4.184;VQSLOD=0.0652;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,111,2538	1/1:5,3:8:8.17:168,8,0	0/1:73,0:25:3.29:3,0,226	0/0:67,0:25:32.30:0,32,503	1/1:6,10:17:19.94:269,20,0	0/0:17,0:17:46.40:0,46,1140	0/0:13,0:13:35.48:0,35,773	1/1:14,14:30:32.53:606,33,0	1/1:4,9:14:20.84:300,21,0	0/0:15,0:16:42.07:0,42,685	0/0:9,0:11:27.08:0,27,580	1/1:3,0:7:7.70:47,8,0	1/1:1,6:7:11.98:180,12,0	1/1:5,5:10:14.86:225,15,0	1/1:6,13:19:27.86:431,28,0	1/1:9,6:15:14.63:192,15,0	1/1:12,10:22:35.37:509,35,0	0/0:17,0:17:36.54:0,37,733	1/1:9,2:11:11.55:136,12,0	1/1:6,10:16:26.80:371,27,0	1/1:6,1:7:5.78:79,6,0	1/1:5,5:11:17.30:234,17,0	0/1:7,1:15:12.30:71,0,12	0/1:7,0:20:11.02:54,0,11	1/1:6,18:24:32.76:496,33,0	1/1:5,12:18:35.80:504,36,0	1/1:8,13:27:46.78:569,47,0	0/1:2,3:6:13.13:65,0,13
chr10	38769469	.	A	AAG	2440.26	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-8.366;DP=743;FS=7.876;HRun=0;HaplotypeScore=93.2424;InbreedingCoeff=0.9922;MQ=75.13;MQ0=0;MQRankSum=0.034;QD=32.98;ReadPosRankSum=1.429;VQSLOD=5.7610;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:48:99:0,111,1327	0/0:12,0:12:30.08:0,30,359	0/0:32,0:31:39.02:0,39,449	0/0:39,0:36:24.46:0,24,533	0/0:11,0:11:18.06:0,18,221	0/0:23,0:23:54.09:0,54,631	0/0:28,0:28:63.14:0,63,747	0/0:32,0:32:60.19:0,60,739	0/0:27,1:28:20.27:0,20,739	0/0:27,0:27:63.19:0,63,766	0/0:16,0:16:45.11:0,45,522	1/1:8,28:37:73.24:1262,73,0	0/0:31,0:31:87.22:0,87,1024	0/0:35,0:34:90.26:0,90,1085	0/0:29,0:29:75.22:0,75,911	0/0:34,0:34:96.30:0,96,1182	0/0:23,0:23:66.21:0,66,812	0/0:24,0:24:54.17:0,54,664	0/0:11,0:11:24.08:0,24,295	0/0:29,0:29:78.22:0,78,937	0/0:35,0:35:75.21:0,75,899	0/0:13,0:13:33.10:0,33,406	1/1:2,9:12:24.08:391,24,0	1/1:4,21:25:57.19:929,57,0	0/0:26,0:26:63.16:0,63,742	0/0:33,0:33:84.24:0,84,1013	0/0:29,1:30:23.42:0,23,776	0/0:19,0:19:51.13:0,51,603
chr10	38771689	.	C	CT	1134.43	PASS	AB=0.568;AC=5;AF=0.089;AN=56;BaseQRankSum=-7.463;DP=577;FS=6.936;HRun=9;HaplotypeScore=58.1064;InbreedingCoeff=0.7695;MQ=74.94;MQ0=0;MQRankSum=-0.541;QD=20.63;ReadPosRankSum=0.892;VQSLOD=4.2354;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,102,875	0/0:11,0:11:32.98:0,33,283	0/0:16,0:14:19.98:0,20,157	0/0:14,0:13:18.88:0,19,172	0/0:23,2:25:29.79:0,30,488	0/0:21,0:21:56.99:0,57,495	0/0:22,0:23:61.95:0,62,512	0/0:38,0:38:83.92:0,84,719	0/0:16,0:16:41.97:0,42,360	0/0:26,0:27:55.98:0,56,473	0/0:18,0:18:50.99:0,51,443	1/1:2,10:12:4.03:273,4,0	0/0:17,0:17:47.98:0,48,417	0/0:16,0:16:35.96:0,36,308	0/0:16,0:16:41.95:0,42,357	0/0:19,0:19:53.99:0,54,469	0/0:22,0:21:62.98:0,63,546	0/0:12,0:12:20.89:0,21,173	0/0:19,0:19:44.98:0,45,390	0/0:30,0:30:74.97:0,75,651	0/0:15,1:16:14.81:0,15,357	0/0:16,0:17:44.03:0,44,371	0/1:5,16:21:3.98:416,0,4	1/1:3,19:22:51.14:564,51,0	0/0:20,0:20:56.94:0,57,488	0/0:31,0:31:80.98:0,81,703	0/0:25,0:25:65.96:0,66,568	0/0:19,0:19:47.99:0,48,417
chr10	38772265	.	CA	C	1421.06	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=6.076;DP=599;FS=22.901;HRun=5;HaplotypeScore=87.0949;InbreedingCoeff=0.9985;MQ=76.08;MQ0=0;MQRankSum=0.075;QD=23.30;ReadPosRankSum=1.836;VQSLOD=2.1094;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:51:99:0,132,1748	0/0:10,0:10:30.10:0,30,404	0/0:17,0:17:42:0,42,528	0/0:21,0:21:54.12:0,54,676	0/0:24,0:24:63.19:0,63,839	0/0:21,0:21:57.02:0,57,779	0/0:27,0:27:78.25:0,78,1049	0/0:24,0:24:69.22:0,69,928	0/0:24,0:24:69.23:0,69,944	0/0:20,0:20:54.18:0,54,738	0/0:17,0:17:48.16:0,48,656	1/1:1,13:14:36.10:408,36,0	0/0:10,0:10:30.10:0,30,409	0/0:14,0:14:33.11:0,33,449	0/0:29,0:29:84.25:0,84,1116	0/0:19,0:19:45.14:0,45,600	0/0:29,0:29:72.21:0,72,965	0/0:18,0:17:45.15:0,45,613	0/0:23,0:23:66.22:0,66,901	0/0:14,0:14:39.11:0,39,515	0/0:32,0:32:93.29:0,93,1249	0/0:9,0:9:24.08:0,24,327	1/1:1,12:13:30.09:341,30,0	1/1:2,32:34:72.20:815,72,0	0/0:17,0:17:48.15:0,48,644	0/0:24,0:24:72.24:0,72,984	0/0:27,0:27:81.27:0,81,1107	0/0:16,0:16:48.16:0,48,656
chr10	38772628	.	T	TTTTC	2470.83	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-7.894;DP=475;FS=3.114;HRun=0;HaplotypeScore=99.9976;InbreedingCoeff=0.9354;MQ=70.40;MQ0=0;MQRankSum=0.963;QD=32.09;ReadPosRankSum=-1.052;VQSLOD=3.4065;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:66.04:0,66,991	0/0:11,0:11:30.09:0,30,363	0/0:16,0:13:2.74:0,3,34	0/0:16,0:9:14.91:0,15,204	0/0:22,0:22:47.82:0,48,554	1/1:7,8:15:24.08:546,24,0	1/1:4,10:14:18.06:435,18,0	0/0:16,0:16:36.07:0,36,387	0/0:17,0:17:42.13:0,42,505	0/0:12,0:12:27.09:0,27,428	0/0:16,0:16:33.10:0,33,526	1/1:3,7:10:21.07:470,21,0	0/0:13,0:13:27.08:0,27,326	0/0:8,0:8:18.06:0,18,218	0/0:13,0:13:36.10:0,36,416	0/0:9,0:9:21.06:0,21,254	0/0:21,0:21:42.11:0,42,486	0/0:20,0:20:39.06:0,39,583	0/0:27,0:26:39.07:0,39,439	0/0:22,0:22:42.11:0,42,494	0/0:18,0:17:36.10:0,36,416	0/0:10,0:10:24.02:0,24,273	1/1:1,5:6:9.50:199,10,0	1/1:9,21:32:42.14:991,42,0	0/0:20,0:20:51.14:0,51,595	0/0:23,0:23:48.15:0,48,580	0/0:22,0:22:63.19:0,63,752	0/0:16,0:16:27.08:0,27,316
chr10	38772644	.	CT	C	6453.44	PASS	AB=1.000;AC=35;AF=0.625;AN=56;BaseQRankSum=0.931;DP=478;FS=0.000;HRun=9;HaplotypeScore=66.5697;InbreedingCoeff=0.9279;MQ=69.27;MQ0=1;MQRankSum=0.155;QD=21.16;ReadPosRankSum=2.396;VQSLOD=5.4982;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:69.20:0,69,795	1/1:0,12:12:33.02:302,33,0	0/1:20,0:15:9.02:9,0,110	0/0:19,0:10:21.06:0,21,238	1/1:0,19:19:57.03:521,57,0	0/0:11,0:11:29.11:0,29,202	0/0:15,0:15:26.75:0,27,227	1/1:4,17:21:47.99:433,48,0	1/1:1,17:18:48.03:439,48,0	0/0:12,0:12:33.09:0,33,373	0/0:14,0:14:36.11:0,36,415	0/0:10,0:10:23.74:0,24,193	1/1:0,14:14:32.99:302,33,0	1/1:0,9:9:18.01:165,18,0	1/1:2,12:14:36.01:329,36,0	1/1:1,9:10:27.01:247,27,0	1/1:2,18:20:45.02:412,45,0	0/0:19,0:19:54.16:0,54,621	1/1:4,25:28:69.03:630,69,0	1/1:1,16:17:45.02:412,45,0	1/1:3,13:16:33:302,33,0	1/1:0,10:10:24.01:220,24,0	0/0:9,0:9:17.92:0,18,174	0/0:37,0:37:65.44:0,65,565	1/1:3,17:20:48.02:439,48,0	1/1:1,17:18:51.03:467,51,0	1/1:1,25:26:66.03:604,66,0	1/1:1,11:12:24.01:220,24,0
chr10	38773173	.	T	TCTA	4398.79	PASS	AB=0.853;AC=24;AF=0.429;AN=56;BaseQRankSum=-13.836;DP=561;FS=228.809;HRun=0;HaplotypeScore=125.6107;InbreedingCoeff=-0.7436;MQ=54.30;MQ0=8;MQRankSum=-11.337;QD=8.80;ReadPosRankSum=1.017;VQSLOD=-0.7658;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:39,8:46:99:378,0,1258	0/1:9,2:11:99:107,0,139	0/0:12,0:9:22.57:0,23,269	0/0:17,0:9:20.70:0,21,303	0/1:22,5:26:99:254,0,381	0/1:21,0:25:99:172,0,447	0/1:14,0:15:6.52:7,0,237	0/1:12,7:16:99:367,0,127	0/1:14,1:15:33.06:33,0,255	0/1:22,6:27:99:354,0,504	0/1:19,3:22:99:135,0,592	0/1:14,3:17:99:142,0,203	0/1:14,2:16:99:104,0,202	0/1:11,4:15:99:231,0,194	0/1:13,4:17:99:219,0,215	0/1:13,1:13:35.73:36,0,237	0/1:24,4:28:99:210,0,364	0/1:20,4:23:99:206,0,763	0/1:10,5:15:99:327,0,209	0/1:20,5:24:99:322,0,366	0/0:27,0:26:45.99:0,46,482	0/1:9,2:10:99:130,0,136	0/1:19,4:23:99:218,0,321	0/1:17,3:20:99:104,0,318	0/1:19,1:20:21.48:21,0,339	0/1:14,4:17:99:219,0,226	0/1:22,2:24:99:103,0,167	0/0:5,0:5:12.01:0,12,118
chr10	38773631	.	C	CTGTTTGTT	14700.73	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=1.998;DP=609;FS=0.469;HRun=0;HaplotypeScore=159.4290;InbreedingCoeff=0.9258;MQ=54.59;MQ0=1;MQRankSum=-9.410;QD=32.74;ReadPosRankSum=-1.178;VQSLOD=4.5051;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:39.13:0,39,838	1/1:7,1:13:16.19:457,16,0	0/0:18,0:17:16.69:0,17,377	0/0:9,0:8:9.03:0,9,197	1/1:17,0:33:27.06:796,27,0	0/0:17,0:17:30.10:0,30,760	0/0:19,0:19:6.24:0,6,875	1/1:41,0:41:16.30:363,16,0	1/1:8,0:17:15.05:523,15,0	0/0:39,0:39:73.13:0,73,1789	0/0:22,0:22:45.69:0,46,1100	1/1:13,0:29:56.94:483,57,0	1/1:13,0:24:21.01:724,21,0	1/1:10,0:28:18.06:626,18,0	1/1:7,0:15:6.02:209,6,0	1/1:5,0:15:15.05:523,15,0	1/1:13,2:26:23.11:724,23,0	0/0:15,0:15:14.27:0,14,617	1/1:12,5:18:25.33:783,25,0	1/1:12,9:26:32.29:1141,32,0	1/1:9,0:9:9.03:206,9,0	1/1:15,5:25:20.99:658,21,0	1/1:11,0:22:50.52:451,51,0	1/1:7,0:13:17.99:157,18,0	1/1:5,8:17:18.06:742,18,0	1/1:17,12:35:60.17:1934,60,0	1/1:8,16:29:45.15:1854,45,0	1/1:2,10:13:33.11:1347,33,0
chr10	38773690	.	CA	C	1725.39	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=6.187;DP=608;FS=0.564;HRun=2;HaplotypeScore=92.7963;InbreedingCoeff=0.9978;MQ=71.39;MQ0=0;MQRankSum=-1.238;QD=31.37;ReadPosRankSum=1.178;VQSLOD=3.3372;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:57.18:0,57,833	0/0:9,0:9:21.03:0,21,290	0/0:20,0:20:52.51:0,53,757	0/0:11,0:11:33.05:0,33,423	0/0:22,0:22:36.08:0,36,514	0/0:17,0:17:48.16:0,48,719	0/0:21,0:21:60.18:0,60,858	0/0:28,0:28:81.25:0,81,1146	0/0:16,0:16:39.13:0,39,584	0/0:30,0:30:84.23:0,84,1217	0/0:33,0:33:99:0,99,1463	1/1:0,24:24:69.22:895,69,0	0/0:24,0:24:60.16:0,60,874	0/0:31,0:31:60.12:0,60,840	0/0:23,0:23:54.15:0,54,785	0/0:16,0:16:36.05:0,36,491	0/0:38,0:38:84.20:0,84,1173	0/0:13,0:13:39.13:0,39,582	0/0:21,0:21:60.19:0,60,875	0/0:25,0:25:63.21:0,63,944	0/0:10,0:10:27.09:0,27,404	0/0:15,0:15:36.04:0,36,489	1/1:1,15:16:39.13:506,39,0	1/1:0,15:15:36.10:467,36,0	0/0:20,0:20:45.15:0,45,674	0/0:35,0:35:99:0,99,1395	0/0:36,0:36:96.32:0,96,1433	0/0:19,0:19:54.18:0,54,809
chr10	38774401	.	CG	C	3036.87	PASS	AB=0.752;AC=41;AF=0.788;AN=52;BaseQRankSum=0.861;DP=277;FS=2.443;HRun=2;HaplotypeScore=42.0379;InbreedingCoeff=0.5543;MQ=41.88;MQ0=22;MQRankSum=-3.608;QD=13.68;ReadPosRankSum=-1.274;VQSLOD=2.3204;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:43.88:0,44,503	1/1:3,4:6:12.04:151,12,0	./.	./.	1/1:8,10:16:23.96:235,24,0	1/1:13,0:11:10.25:52,10,0	1/1:13,0:11:4.93:44,5,0	1/1:1,9:10:20.99:228,21,0	1/1:5,5:10:27:268,27,0	0/0:10,0:8:14.45:0,14,138	0/0:11,0:9:12.01:0,12,152	1/1:1,1:4:2.83:19,3,0	1/1:1,5:5:12.04:151,12,0	1/1:1,10:10:17.98:190,18,0	1/1:3,8:9:17.97:190,18,0	1/1:2,11:13:18.42:255,18,0	1/1:6,5:9:17.99:192,18,0	0/0:12,0:11:30.06:0,30,398	1/1:6,10:13:30.88:305,31,0	1/1:2,9:11:14.96:151,15,0	1/1:4,6:10:2.96:19,3,0	0/1:5,0:4:1.85:31,0,2	0/1:3,3:4:4.93:5,0,5	1/1:2,8:10:3.14:44,3,0	1/1:2,10:12:14.32:187,14,0	0/1:3,7:9:14.06:218,0,14	1/1:4,6:10:20.17:235,20,0	1/1:2,0:2:3:27,3,0
chr10	38774402	.	G	GA	74.36	PASS	AC=4;AF=0.077;AN=52;BaseQRankSum=-1.140;DP=299;FS=1.423;HRun=0;HaplotypeScore=67.4900;InbreedingCoeff=0.5574;MQ=43.30;MQ0=22;MQRankSum=-0.633;QD=2.66;ReadPosRankSum=-1.201;VQSLOD=2.2659;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:47.92:0,48,579	0/0:6,0:5:7.82:0,8,23	./.	./.	0/0:17,0:17:9.47:0,9,28	1/1:4,10:12:10.77:93,11,0	1/1:5,8:12:13.06:88,13,0	0/0:10,0:10:9.97:0,10,29	0/0:11,0:11:9.49:0,9,30	0/0:10,0:8:20.77:0,21,229	0/0:13,0:11:12.04:0,12,165	0/0:5,0:4:0.47:0,0,2	0/0:8,0:7:7.71:0,8,23	0/0:10,0:10:10.14:0,10,31	0/0:10,0:9:10.30:0,10,32	0/0:13,0:13:17.06:0,17,59	0/0:16,0:14:11.09:0,11,33	0/0:13,0:12:30.10:0,30,415	0/0:16,0:14:17:0,17,57	0/0:12,0:12:6.52:0,7,20	0/0:8,0:9:3.47:0,3,26	0/0:5,0:4:4.24:0,4,26	0/0:6,0:4:5.35:0,5,29	0/0:12,0:10:7.38:0,7,31	0/0:13,0:13:12.54:0,13,43	0/0:12,0:11:16:0,16,76	0/0:12,0:11:14.28:0,14,69	0/0:2,0:2:0:0,0,0
chr10	38774474	.	G	GT	68.29	PASS	AC=4;AF=0.074;AN=54;BaseQRankSum=3.799;DP=343;FS=3.863;HRun=1;HaplotypeScore=42.8551;InbreedingCoeff=0.7061;MQ=54.06;MQ0=18;MQRankSum=-2.691;QD=8.54;ReadPosRankSum=-1.983;VQSLOD=0.3788;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:69.13:0,69,843	0/0:7,0:7:18.06:0,18,234	0/0:3,0:1:3.01:0,3,39	0/0:6,0:4:6:0,6,63	0/0:21,0:21:54.18:0,54,701	0/0:8,0:8:18.06:0,18,234	0/0:19,1:17:45.13:0,45,568	0/0:25,0:20:57.19:0,57,739	0/0:8,0:8:24.08:0,24,311	0/0:24,0:21:58.05:0,58,714	0/0:20,0:19:51.15:0,51,646	1/1:1,2:3:8.89:81,9,0	0/0:6,0:5:15.05:0,15,195	0/0:9,0:9:24.01:0,24,290	0/0:10,0:10:30.10:0,30,389	0/0:11,0:10:33.11:0,33,426	0/0:22,0:22:63.20:0,63,817	0/0:8,0:8:15.05:0,15,195	0/0:12,0:10:30.10:0,30,387	0/0:16,0:16:42.12:0,42,531	0/0:11,0:11:24.08:0,24,311	0/0:16,0:15:42.13:0,42,530	./.	1/1:2,3:5:6.02:90,6,0	0/0:8,0:8:4.08:0,4,217	0/0:14,0:13:39.11:0,39,481	0/0:13,0:13:36.12:0,36,466	0/0:9,0:8:24.08:0,24,311
chr10	38774524	.	C	CA	661	PASS	AB=0.964;AC=8;AF=0.143;AN=56;BaseQRankSum=2.699;DP=527;FS=8.885;HRun=12;HaplotypeScore=65.5257;InbreedingCoeff=0.5151;MQ=55.06;MQ0=14;MQRankSum=1.534;QD=8.70;ReadPosRankSum=-0.110;VQSLOD=1.9303;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:50:80.59:0,81,699	0/0:8,0:9:16.92:0,17,115	0/0:8,1:2:3.45:0,3,22	0/0:12,0:5:3.57:0,4,32	0/0:20,1:21:6.57:0,7,212	0/0:16,0:17:31.76:0,32,221	0/0:28,0:26:33.54:0,34,406	0/0:18,0:18:31.81:0,32,224	0/1:9,0:10:0.62:1,0,114	0/0:23,1:23:0.57:0,1,168	0/0:22,0:23:51.77:0,52,362	1/1:2,15:18:14.15:299,14,0	0/0:10,0:11:22.86:0,23,159	0/0:14,0:16:17.40:0,17,211	0/1:12,1:13:5.35:5,0,129	0/0:16,0:16:31.40:0,31,213	0/0:33,0:34:88.33:0,88,630	0/0:16,0:16:2.20:0,2,113	0/0:16,0:16:22.87:0,23,159	0/0:23,0:23:23.42:0,23,302	0/0:16,0:14:29.79:0,30,219	0/0:21,0:20:39.53:0,40,338	1/1:0,11:11:15.50:147,15,0	1/1:4,20:24:1.28:335,1,0	0/0:13,0:13:20.87:0,21,153	0/0:17,0:15:29.76:0,30,219	0/0:17,0:19:27.82:0,28,185	0/0:13,0:13:35.75:0,36,259
chr10	38775247	.	GCA	G	663.48	PASS	AB=0.940;AC=8;AF=0.143;AN=56;BaseQRankSum=-2.085;DP=474;FS=4.843;HRun=0;HaplotypeScore=117.0149;InbreedingCoeff=0.5378;MQ=54.77;MQ0=4;MQRankSum=4.740;QD=7.37;ReadPosRankSum=0.659;VQSLOD=3.0292;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,1:24:10.49:0,10,613	0/0:11,0:11:20.98:0,21,194	0/1:26,0:12:13.51:14,0,43	0/0:23,0:15:6.02:0,6,89	0/0:25,0:25:37.79:0,38,251	0/0:11,0:11:21:0,21,183	0/0:15,0:15:0.39:0,0,63	0/0:24,0:24:32.71:0,33,331	0/0:10,0:10:15:0,15,129	0/0:20,0:19:39.13:0,39,607	0/0:19,2:21:13.49:0,13,644	1/1:5,0:5:6.02:69,6,0	0/0:11,0:11:20.94:0,21,173	0/0:15,0:15:23.96:0,24,198	0/0:15,0:15:23.96:0,24,217	0/0:6,0:6:8.99:0,9,75	0/0:17,0:17:23.96:0,24,198	0/1:19,3:22:27.19:27,0,513	0/0:18,0:17:32.96:0,33,328	0/0:19,0:19:21.16:0,21,198	0/0:11,0:11:3.01:0,3,46	0/0:16,0:16:14.67:0,15,110	1/1:24,0:24:41.95:456,42,0	1/1:13,0:13:21.06:242,21,0	0/0:15,0:15:24:0,24,207	0/0:17,0:16:37.21:0,37,360	0/0:21,0:22:44.99:0,45,389	0/0:18,0:18:27.02:0,27,273
chr10	38775271	.	AC	A	252.10	PASS	AB=0.630;AC=4;AF=0.071;AN=56;BaseQRankSum=0.378;DP=523;FS=2.933;HRun=1;HaplotypeScore=116.1002;InbreedingCoeff=0.4216;MQ=56.55;MQ0=6;MQRankSum=2.544;QD=8.13;ReadPosRankSum=3.476;VQSLOD=1.3748;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:85.80:0,86,1190	0/0:11,0:11:23.10:0,23,259	0/0:21,0:8:19.71:0,20,194	0/0:18,0:10:26.77:0,27,298	0/0:33,0:33:55.48:0,55,441	0/0:14,0:14:21.06:0,21,249	0/0:20,0:20:8.53:0,9,100	0/0:22,0:22:64.32:0,64,648	0/0:13,0:13:15.05:0,15,177	0/0:24,0:24:72.24:0,72,1039	0/0:24,0:24:67.77:0,68,982	0/1:2,2:4:7.09:32,0,7	0/0:11,0:11:24.07:0,24,292	0/0:18,0:18:24.07:0,24,306	0/0:18,0:18:27.08:0,27,343	0/0:10,0:10:9.03:0,9,105	0/0:19,0:19:24.07:0,24,306	0/0:23,0:23:53.94:0,54,759	0/0:23,0:23:66.17:0,66,819	0/0:20,0:20:38.01:0,38,390	0/0:8,0:8:9.01:0,9,106	0/0:20,0:20:19.87:0,20,163	0/1:6,12:19:23.10:210,0,23	1/1:1,7:8:8.60:118,9,0	0/0:19,0:19:27.07:0,27,307	0/0:20,0:19:54.04:0,54,668	0/0:26,0:26:50.16:0,50,568	0/0:25,0:24:27.09:0,27,360
chr10	38775273	.	AC	A	285.94	PASS	AB=0.657;AC=4;AF=0.071;AN=56;BaseQRankSum=0.253;DP=522;FS=0.788;HRun=1;HaplotypeScore=116.1438;InbreedingCoeff=0.5578;MQ=56.94;MQ0=6;MQRankSum=2.422;QD=9.22;ReadPosRankSum=2.997;VQSLOD=1.4503;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:84.70:0,85,1143	0/0:11,0:11:22.03:0,22,128	0/0:18,0:7:19:0,19,135	0/0:18,0:10:23.11:0,23,231	0/0:32,0:32:51.03:0,51,221	0/0:14,0:14:19.69:0,20,96	0/0:21,0:21:7.84:0,8,58	0/0:21,0:21:56.85:0,57,358	0/0:13,0:13:14.03:0,14,66	0/0:24,0:24:72.23:0,72,1011	0/0:26,0:26:72.67:0,73,1015	0/1:3,2:5:3.91:32,0,4	0/0:11,0:11:19.73:0,20,97	0/0:19,0:19:22.81:0,23,127	0/0:17,0:17:22.83:0,23,147	0/0:10,0:10:8.44:0,8,40	0/0:20,0:20:22.80:0,23,124	0/0:22,0:22:50.02:0,50,722	0/0:23,0:23:67.09:0,67,462	0/0:20,0:20:35.86:0,36,179	0/0:8,0:8:3.01:0,3,43	0/0:20,0:20:19.38:0,19,77	0/1:6,12:18:2.50:242,0,3	1/1:1,7:8:12.22:122,12,0	0/0:19,0:19:22.38:0,22,107	0/0:23,0:22:58.34:0,58,367	0/0:25,0:25:44.39:0,44,220	0/0:25,0:24:25.61:0,26,175
chr10	38775274	.	C	CACACACAA	14963.45	PASS	AB=0.886;AC=40;AF=0.714;AN=56;BaseQRankSum=-2.005;DP=543;FS=10.143;HRun=0;HaplotypeScore=123.2423;InbreedingCoeff=0.6104;MQ=57.44;MQ0=6;MQRankSum=-7.988;QD=36.86;ReadPosRankSum=-3.007;VQSLOD=3.3322;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:86.52:0,87,1456	1/1:3,7:13:27.09:1002,27,0	0/0:18,0:7:10.15:0,10,117	0/0:17,0:9:13.67:0,14,157	1/1:6,23:34:74.72:1852,75,0	1/1:0,1:14:21.07:583,21,0	1/1:3,0:23:12:205,12,0	1/1:20,0:20:60.03:701,60,0	1/1:1,10:15:18.06:775,18,0	0/0:24,0:24:72.17:0,72,1438	0/0:26,0:26:58.20:0,58,1492	0/1:5,0:5:28.46:34,0,28	1/1:2,7:11:12.76:839,13,0	1/1:4,12:19:17.73:689,18,0	1/1:4,12:18:27.09:1066,27,0	1/1:2,7:12:12.04:523,12,0	1/1:7,14:24:27.09:1199,27,0	0/0:21,0:21:18.38:0,18,1216	1/1:7,0:24:55.68:926,56,0	1/1:3,0:20:36.73:597,37,0	1/1:0,0:9:3.01:39,3,0	1/1:7,12:20:35.95:1041,36,0	0/1:18,0:18:18.78:19,0,346	0/1:8,0:8:2.95:3,0,185	1/1:2,0:22:27.56:599,28,0	0/1:4,0:24:23.14:808,0,23	1/1:5,0:27:41.33:1028,41,0	1/1:2,0:24:4.09:436,4,0
chr10	38775504	.	GACCTAC	G	1848.24	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=7.077;DP=530;FS=0.000;HRun=0;HaplotypeScore=143.2039;InbreedingCoeff=0.9928;MQ=86.88;MQ0=0;MQRankSum=-8.532;QD=44.01;ReadPosRankSum=0.590;VQSLOD=3.1426;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:87.30:0,87,3032	0/0:10,0:10:30.10:0,30,1099	0/0:20,0:20:53.91:0,54,1724	0/0:20,0:20:60.21:0,60,1786	0/0:24,0:24:72.23:0,72,2472	0/0:13,0:13:39.13:0,39,1415	0/0:15,0:15:45.15:0,45,1588	0/0:37,0:37:99:0,111,3790	0/0:19,0:19:57.20:0,57,2047	0/0:23,0:23:63.22:0,63,2299	0/0:18,0:18:54.19:0,54,1971	1/1:0,13:13:33.11:812,33,0	0/0:19,0:19:57.20:0,57,2056	0/0:13,0:13:39.13:0,39,1429	0/0:18,0:18:51.15:0,51,1723	0/0:18,0:18:54.19:0,54,1970	0/0:24,0:24:69.19:0,69,2391	0/0:14,0:14:39.10:0,39,1339	0/0:19,0:19:54.19:0,54,1900	0/0:16,0:16:48.16:0,48,1654	0/0:28,0:28:84.27:0,84,2967	0/0:10,0:10:27.09:0,27,989	1/1:2,13:15:33.11:811,33,0	1/1:1,13:14:14.63:366,15,0	0/0:10,0:10:30.10:0,30,1099	0/0:21,0:21:63.22:0,63,2251	0/0:23,0:23:69.24:0,69,2432	0/0:27,0:27:75.26:0,75,2595
chr10	38776025	.	GAAAA	G	4579.54	PASS	AB=0.773;AC=39;AF=0.696;AN=56;BaseQRankSum=5.858;DP=318;FS=2.904;HRun=6;HaplotypeScore=78.4533;InbreedingCoeff=0.6585;MQ=88.08;MQ0=0;MQRankSum=-6.195;QD=24.36;ReadPosRankSum=-5.702;VQSLOD=0.0379;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:69.24:0,69,1783	1/1:0,2:2:6.02:84,6,0	0/0:23,0:22:60.14:0,60,1450	0/0:28,0:27:66.65:0,67,1621	0/1:4,1:6:5.51:49,0,6	1/1:3,2:10:27.06:361,27,0	1/1:7,3:12:21.06:320,21,0	1/1:4,10:14:21.11:389,21,0	1/1:8,4:12:23.04:322,23,0	0/0:20,0:20:60.21:0,60,1572	0/0:20,0:20:54.19:0,54,1440	0/1:9,0:11:24.24:24,0,35	1/1:7,0:7:11.24:130,11,0	1/1:0,4:4:3.01:56,3,0	1/1:10,6:16:29.29:416,29,0	1/1:8,3:11:18.57:247,19,0	1/1:5,1:7:21.05:268,21,0	0/0:8,0:8:24.08:0,24,642	1/1:2,3:6:15.05:228,15,0	1/1:4,1:6:14.47:178,14,0	1/1:6,4:11:12.04:212,12,0	1/1:3,1:5:12:143,12,0	0/0:5,0:5:5.44:0,5,24	0/1:8,0:13:10.73:81,0,11	1/1:5,3:13:30.08:430,30,0	1/1:2,0:2:3.01:47,3,0	1/1:2,11:13:24.04:409,24,0	1/1:6,1:7:14.07:185,14,0
chr10	38776192	.	T	TA	15502.18	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=11.622;DP=540;FS=5.770;HRun=1;HaplotypeScore=84.7602;InbreedingCoeff=0.9886;MQ=65.47;MQ0=0;MQRankSum=-0.705;QD=36.22;ReadPosRankSum=2.007;VQSLOD=5.2510;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:63.20:0,63,855	1/1:0,11:11:30.10:429,30,0	0/0:9,0:6:14.79:0,15,196	0/0:7,0:6:11.38:0,11,127	1/1:1,23:24:57.19:801,57,0	1/1:1,22:23:57.18:808,57,0	1/1:0,20:20:39.13:557,39,0	1/1:0,26:26:78.04:950,78,0	1/1:0,16:16:45.15:641,45,0	0/0:29,0:29:87.05:0,87,1121	0/0:28,0:28:84.12:0,84,1065	1/1:0,15:15:39.13:554,39,0	1/1:0,17:17:42.14:600,42,0	1/1:1,18:19:48.15:678,48,0	1/1:1,17:18:51.17:726,51,0	1/1:1,21:22:49.38:802,49,0	1/1:0,26:26:63.21:899,63,0	0/0:18,0:18:51.09:0,51,634	1/1:4,27:31:84.20:1123,84,0	1/1:0,22:22:66.06:869,66,0	1/1:0,14:14:30.10:421,30,0	1/1:1,16:17:45.06:616,45,0	1/1:0,20:20:48.16:684,48,0	1/1:0,10:10:24.08:343,24,0	1/1:0,16:16:48.16:683,48,0	1/1:0,25:25:75.24:1047,75,0	1/1:1,23:25:60.20:846,60,0	1/1:0,11:11:30.10:426,30,0
chr10	38776368	.	A	AAC	12765.69	PASS	AB=0.600;AC=43;AF=0.768;AN=56;BaseQRankSum=1.339;DP=546;FS=0.866;HRun=0;HaplotypeScore=85.1158;InbreedingCoeff=0.9097;MQ=73.33;MQ0=0;MQRankSum=-4.559;QD=29.90;ReadPosRankSum=4.656;VQSLOD=6.1472;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:70.08:0,70,975	1/1:0,4:4:5.92:68,6,0	0/0:20,0:16:32.51:0,33,342	0/0:16,0:11:26.99:0,27,310	1/1:2,16:19:44.60:603,45,0	1/1:17,0:17:37.38:192,37,0	1/1:13,0:14:26.09:130,26,0	1/1:6,20:27:63.05:854,63,0	1/1:2,22:24:51.15:842,51,0	0/0:27,0:27:68.87:0,69,923	0/0:15,0:15:42.09:0,42,530	1/1:17,0:17:35.70:174,36,0	1/1:0,18:18:33.11:559,33,0	1/1:3,18:21:51.02:813,51,0	1/1:1,20:21:51.17:865,51,0	1/1:1,20:21:50.99:862,51,0	1/1:2,18:21:33.10:550,33,0	0/0:16,0:16:45.10:0,45,582	1/1:1,28:30:83.96:1097,84,0	0/1:3,6:9:1.74:171,0,2	1/1:1,10:11:30.10:509,30,0	1/1:1,18:19:16.16:679,16,0	1/1:13,0:13:31.57:163,32,0	1/1:20,1:21:44.02:292,44,0	1/1:1,16:19:36.11:608,36,0	1/1:4,30:35:25.78:1284,26,0	1/1:6,28:37:77.38:1248,77,0	1/1:0,9:9:12.04:203,12,0
chr10	38776369	.	A	AC	6694.27	PASS	AB=1.000;AC=41;AF=0.732;AN=56;BaseQRankSum=6.591;DP=540;FS=0.384;HRun=0;HaplotypeScore=94.8420;InbreedingCoeff=0.6822;MQ=73.09;MQ0=0;MQRankSum=-3.942;QD=15.86;ReadPosRankSum=7.364;VQSLOD=6.3394;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:70.08:0,70,901	0/1:4,0:4:10.91:26,0,11	0/0:19,0:15:35.91:0,36,343	0/0:16,0:11:29.98:0,30,307	1/1:17,1:18:5.18:253,5,0	1/1:1,17:18:39.11:531,39,0	1/1:1,13:14:28.65:391,29,0	0/1:23,0:23:19.58:262,0,20	1/1:25,0:25:29.50:274,29,0	0/0:26,0:26:68.21:0,68,890	0/0:16,0:16:42.10:0,42,507	1/1:0,17:17:39.12:512,39,0	1/1:19,0:19:32.35:194,32,0	1/1:20,1:21:27.59:284,28,0	1/1:20,1:21:50.01:302,50,0	1/1:20,0:20:49.94:298,50,0	1/1:21,0:21:10.72:162,11,0	0/0:16,0:16:45.11:0,45,570	1/1:29,0:29:4.33:365,4,0	0/1:7,0:7:2.26:72,0,2	1/1:11,0:11:29.40:177,29,0	1/1:18,0:18:6.35:252,6,0	1/1:0,13:13:33.02:423,33,0	1/1:3,19:22:51.17:707,51,0	1/1:19,0:19:11.54:183,12,0	1/1:36,0:36:8.25:502,8,0	1/1:35,2:37:41.37:456,41,0	1/1:9,0:9:11.77:71,12,0
chr10	38776698	.	T	TC	535.97	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=1.181;DP=341;FS=3.244;HRun=5;HaplotypeScore=80.8594;InbreedingCoeff=0.7821;MQ=76.10;MQ0=0;MQRankSum=-0.437;QD=18.48;ReadPosRankSum=-0.692;VQSLOD=3.1694;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:75.19:0,75,805	0/0:3,0:3:3.01:0,3,32	0/0:10,0:9:7.39:0,7,159	0/0:15,0:12:14.95:0,15,162	0/0:7,0:7:18.04:0,18,193	1/1:3,5:8:15.05:195,15,0	1/1:8,13:21:36.10:458,36,0	0/0:19,0:19:39.06:0,39,419	0/0:15,0:15:36.09:0,36,386	0/0:11,0:11:24.06:0,24,258	0/0:11,0:11:18.04:0,18,191	0/0:17,0:17:36.08:0,36,381	0/0:12,0:12:24.06:0,24,257	0/0:11,0:11:23.98:0,24,242	0/0:16,0:16:24.02:0,24,257	0/0:7,0:7:17.96:0,18,178	0/0:12,0:12:26.98:0,27,267	0/0:12,0:12:33.07:0,33,346	0/0:9,0:9:21.05:0,21,225	0/0:4,0:4:6.01:0,6,64	0/0:27,0:27:57.09:0,57,592	0/0:12,0:12:20.88:0,21,225	0/0:7,0:7:18.03:0,18,185	0/0:14,0:14:35.87:0,36,366	0/0:9,0:9:21.05:0,21,225	0/0:10,0:10:21.05:0,21,225	0/0:8,0:8:24.01:0,24,232	0/0:4,0:4:9.02:0,9,96
chr10	38776752	.	GTGTA	G	526.24	PASS	AB=0.958;AC=18;AF=0.321;AN=56;BaseQRankSum=1.354;DP=383;FS=5.477;HRun=0;HaplotypeScore=106.1794;InbreedingCoeff=0.1758;MQ=72.86;MQ0=10;MQRankSum=1.252;QD=3.73;ReadPosRankSum=-0.412;VQSLOD=1.6416;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:38.19:0,38,1524	1/1:3,0:3:2.22:7,2,0	0/0:49,0:20:47.50:0,48,595	0/0:36,0:13:0.29:0,0,368	1/1:15,0:15:0.51:2,1,0	1/1:5,0:5:5.52:49,6,0	0/1:15,1:16:10.29:67,0,10	0/1:15,0:15:40.56:147,0,41	0/1:14,1:15:17.30:62,0,17	0/0:7,0:7:21.07:0,21,523	0/0:14,0:14:39.11:0,39,965	0/0:12,0:12:2.27:0,2,8	0/0:8,0:8:0.47:0,0,1	0/0:10,0:10:0.47:0,0,1	0/0:15,0:15:0.47:0,0,1	0/0:6,0:6:3.01:0,3,46	1/1:6,0:6:2.78:19,3,0	0/0:15,0:15:33.02:0,33,854	0/1:9,0:9:37.19:37,0,88	0/0:7,0:7:1.40:0,1,14	0/1:11,2:13:33.08:115,0,33	0/0:14,0:14:0.47:0,0,1	0/0:12,0:12:2.37:0,2,9	1/1:13,1:14:2.41:62,2,0	0/0:5,0:5:0:0,0,0	1/1:14,0:14:8.36:89,8,0	0/1:16,0:16:2.97:3,0,12	0/0:3,0:3:0:0,0,0
chr10	38776754	.	GTA	G	7546.91	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=5.317;DP=382;FS=5.525;HRun=0;HaplotypeScore=69.1577;InbreedingCoeff=0.8861;MQ=72.80;MQ0=9;MQRankSum=0.813;QD=32.11;ReadPosRankSum=3.857;VQSLOD=6.6816;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:57.73:0,58,1106	1/1:0,3:3:3.01:48,3,0	0/0:48,0:20:43.82:0,44,473	0/0:36,0:12:5.82:0,6,200	1/1:0,15:15:33.11:535,33,0	1/1:2,3:5:12.01:147,12,0	1/1:3,11:15:35.66:493,36,0	1/1:0,15:15:45.01:515,45,0	1/1:1,12:13:39.12:609,39,0	0/0:7,0:7:20.96:0,21,346	0/0:14,0:14:39.09:0,39,659	1/1:0,12:12:15.05:235,15,0	1/1:0,9:9:15.05:242,15,0	1/1:0,10:10:21.07:339,21,0	1/1:0,15:15:30.10:485,30,0	1/1:0,6:6:12.04:195,12,0	1/1:0,7:7:18.01:262,18,0	0/0:15,0:15:30.01:0,30,601	1/1:0,10:10:26.73:275,27,0	1/1:0,7:7:15.05:227,15,0	1/1:2,10:12:30.08:440,30,0	1/1:0,14:14:18.06:291,18,0	1/1:0,12:12:27.09:428,27,0	1/1:1,12:13:27.08:415,27,0	1/1:0,6:6:6.02:97,6,0	1/1:1,14:15:44.91:566,45,0	1/1:0,16:16:36.12:560,36,0	1/1:0,5:5:9.03:146,9,0
chr10	38777429	.	AC	A	3208.58	PASS	AC=42;AF=0.778;AN=54;BaseQRankSum=8.535;DP=397;FS=13.276;HRun=2;HaplotypeScore=96.1490;InbreedingCoeff=0.7878;MQ=53.94;MQ0=14;MQRankSum=-6.427;QD=13.31;ReadPosRankSum=4.567;VQSLOD=1.5179;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:22:41.87:0,42,437	1/1:12,0:12:23.99:207,24,0	0/0:49,0:7:15.89:0,16,98	0/0:38,0:12:12.78:0,13,98	1/1:25,0:25:55.87:400,56,0	1/1:10,5:13:17.97:154,18,0	1/1:8,1:7:2.88:31,3,0	1/1:24,0:23:41.80:325,42,0	1/1:2,0:2:3:26,3,0	0/0:16,0:15:38.82:0,39,336	0/0:14,0:13:21.08:0,21,166	1/1:5,0:5:5.98:48,6,0	1/1:10,0:10:11.97:96,12,0	1/1:4,1:5:11.87:80,12,0	1/1:10,0:10:12:103,12,0	1/1:4,0:4:5.97:46,6,0	1/1:22,0:22:38.90:316,39,0	0/0:15,0:15:29.68:0,30,241	1/1:10,0:9:23.95:198,24,0	1/1:17,0:16:38.65:274,39,0	./.	1/1:3,0:3:8.93:66,9,0	1/1:4,0:4:2.99:24,3,0	1/1:3,0:4:11.91:101,12,0	1/1:20,0:20:38.93:320,39,0	1/1:19,0:19:38.97:328,39,0	1/1:14,0:14:28.51:229,29,0	1/1:7,0:7:2.98:21,3,0
chr10	38777430	.	CCAAAAAA	C	8020.81	PASS	AC=38;AF=0.704;AN=54;BaseQRankSum=6.810;DP=398;FS=11.584;HRun=0;HaplotypeScore=107.4307;InbreedingCoeff=0.8307;MQ=55.30;MQ0=14;MQRankSum=-5.211;QD=37.31;ReadPosRankSum=4.244;VQSLOD=4.0482;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:62.41:0,62,1288	1/1:0,12:12:24.08:599,24,0	0/0:50,0:8:20.44:0,20,197	0/0:39,0:12:18.46:0,18,248	1/1:1,24:25:56.79:979,57,0	0/0:6,0:13:18.06:0,18,268	0/0:9,0:7:6.02:0,6,138	1/1:0,24:23:59.53:684,60,0	1/1:0,2:2:3.01:75,3,0	0/0:17,0:16:45.13:0,45,908	0/0:12,0:12:30.09:0,30,762	1/1:0,0:5:6.02:116,6,0	1/1:0,10:10:12.04:292,12,0	1/1:4,0:4:11.94:139,12,0	1/1:1,9:10:12.04:299,12,0	1/1:0,4:4:6.02:130,6,0	1/1:0,21:22:39.13:906,39,0	0/0:15,0:15:42.11:0,42,1080	1/1:0,10:9:27.01:428,27,0	1/1:1,16:16:44.66:581,45,0	./.	1/1:0,3:3:8.94:114,9,0	1/1:0,0:4:3:58,3,0	1/1:4,0:4:11.51:118,12,0	1/1:0,20:20:39.13:957,39,0	1/1:0,19:19:41.90:822,42,0	1/1:0,13:13:28.06:665,28,0	1/1:0,7:7:3.01:58,3,0
chr10	38778066	.	A	ATGTTTTTGTTTT	44733.84	PASS	AB=0.846;AC=44;AF=0.786;AN=56;BaseQRankSum=-2.996;DP=687;FS=0.903;HRun=0;HaplotypeScore=217.5329;InbreedingCoeff=0.8273;MQ=54.28;MQ0=0;MQRankSum=-13.279;QD=80.75;ReadPosRankSum=-4.078;VQSLOD=3.9974;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:69.17:0,69,2127	1/1:7,4:11:18.06:944,18,0	0/0:12,0:11:15.05:0,15,447	0/1:7,0:6:0:0,0,0	1/1:23,16:41:78.23:3370,78,0	1/1:14,13:27:51.18:2919,51,0	1/1:12,8:22:30.10:1599,30,0	1/1:34,0:34:48.16:1895,48,0	1/1:12,11:23:36.12:1872,36,0	0/0:42,0:42:81.27:0,81,2680	0/0:21,0:21:45.15:0,45,1570	1/1:8,0:32:39.10:1824,39,0	1/1:13,7:21:27.09:1502,27,0	1/1:13,10:23:42.14:2306,42,0	1/1:16,13:31:48.16:2735,48,0	1/1:8,11:21:42.14:2411,42,0	1/1:17,8:28:27.09:1297,27,0	0/0:28,0:28:69.24:0,69,2407	1/1:24,5:28:39.60:1857,40,0	1/1:11,13:24:52.99:2794,53,0	1/1:14,1:15:18.06:753,18,0	1/1:6,16:23:48.16:2829,48,0	1/1:11,0:22:46.10:1870,46,0	1/1:4,0:12:12.04:395,12,0	1/1:18,8:26:42.14:2367,42,0	0/1:25,18:45:20.01:4387,0,20	1/1:16,10:26:48.16:2673,48,0	1/1:9,0:9:6.02:136,6,0
chr10	38778591	.	TCTGC	T	450.86	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=0.983;DP=382;FS=0.000;HRun=0;HaplotypeScore=93.8630;InbreedingCoeff=0.8676;MQ=82.65;MQ0=1;MQRankSum=-3.422;QD=37.57;ReadPosRankSum=0.859;VQSLOD=3.6311;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,105,2956	0/0:9,0:9:21.52:0,22,406	0/0:20,0:16:33.62:0,34,1015	0/0:19,0:18:43.96:0,44,1092	0/0:20,0:19:42.10:0,42,830	1/1:0,6:6:15.05:313,15,0	1/1:0,6:6:12.04:251,12,0	0/0:25,0:25:72.20:0,72,1248	0/0:13,0:13:33.05:0,33,618	0/0:19,0:19:54.65:0,55,1470	0/0:17,0:17:42.14:0,42,1176	0/0:12,0:12:30.09:0,30,561	0/0:9,0:9:11.86:0,12,267	0/0:5,0:5:8.91:0,9,185	0/0:15,0:15:26.53:0,27,520	0/0:9,0:9:20.99:0,21,374	0/0:18,0:17:27.98:0,28,506	0/0:9,0:9:27.09:0,27,736	0/0:13,0:13:39.13:0,39,704	0/0:14,0:14:23.62:0,24,455	0/0:10,0:10:18.06:0,18,333	0/0:11,0:11:30.10:0,30,570	0/0:10,0:9:27.09:0,27,503	0/0:9,0:9:17.73:0,18,366	0/0:10,0:9:24.08:0,24,478	0/0:15,0:14:33.89:0,34,760	0/0:16,0:16:30.10:0,30,578	0/0:5,0:5:6.02:0,6,118
chr10	38778600	.	C	CCTT	1128.04	PASS	AB=0.708;AC=24;AF=0.429;AN=56;BaseQRankSum=6.610;DP=451;FS=2.907;HRun=0;HaplotypeScore=95.5644;InbreedingCoeff=-0.4404;MQ=67.89;MQ0=5;MQRankSum=-8.314;QD=3.45;ReadPosRankSum=-3.534;VQSLOD=1.2179;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:40:95.28:0,95,1279	1/1:1,0:7:15.48:143,15,0	0/0:18,0:11:20.15:0,20,210	0/0:15,0:13:32.39:0,32,324	0/1:12,0:24:40.96:41,0,204	0/1:9,0:11:37.69:88,0,38	0/1:7,0:9:2.71:55,0,3	0/1:23,0:21:52.13:52,0,218	0/1:5,0:14:72.85:91,0,73	0/0:18,0:22:53.26:0,53,673	0/0:16,0:15:20.01:0,20,312	0/1:5,0:10:36.24:89,0,36	0/1:2,0:15:14.59:71,0,15	0/1:2,0:10:17.83:25,0,18	0/1:6,1:21:21.37:21,0,87	0/1:7,0:13:12.82:13,0,112	0/1:5,0:24:38.10:38,0,73	0/0:10,0:13:27:0,27,410	0/1:28,0:27:99:198,0,184	0/1:9,0:16:55.68:57,0,56	0/1:2,0:11:10.58:11,0,60	0/1:5,0:5:17.41:17,0,38	0/1:10,0:10:5.80:6,0,121	0/1:4,0:8:18.96:93,0,19	0/1:5,0:11:47.58:48,0,57	0/1:11,0:22:89.64:90,0,182	0/1:6,0:19:39.07:39,0,95	1/1:2,0:7:1.55:4,2,0
chr10	38778802	.	C	CT	10330.33	PASS	AB=1.000;AC=54;AF=0.964;AN=56;BaseQRankSum=-4.177;DP=322;FS=3.518;HRun=2;HaplotypeScore=45.7329;InbreedingCoeff=0.0153;MQ=67.01;MQ0=1;MQRankSum=-1.580;QD=32.08;ReadPosRankSum=3.424;VQSLOD=4.4834;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,15:16:39.13:559,39,0	1/1:0,5:5:12.04:172,12,0	0/1:8,0:4:13.49:13,0,39	0/1:10,0:8:9.97:10,0,49	1/1:0,19:19:57.06:768,57,0	1/1:0,10:10:27.09:387,27,0	1/1:3,12:15:35.57:480,36,0	1/1:1,23:24:69.17:917,69,0	1/1:0,11:11:27.09:388,27,0	1/1:0,15:15:45.10:561,45,0	1/1:4,17:20:51.10:693,51,0	1/1:1,7:8:18.06:258,18,0	1/1:0,6:6:12.04:171,12,0	1/1:0,7:7:18.06:258,18,0	1/1:1,4:5:9.03:129,9,0	1/1:1,12:13:24.08:343,24,0	1/1:0,16:16:36.12:517,36,0	1/1:0,20:20:42.10:580,42,0	1/1:1,13:14:39.12:541,39,0	1/1:1,10:11:29.96:380,30,0	1/1:0,7:7:15.05:216,15,0	1/1:1,0:1:3:25,3,0	1/1:1,2:3:6.02:86,6,0	1/1:0,3:3:9.03:129,9,0	1/1:1,9:10:0.97:359,1,0	1/1:1,13:12:30.08:397,30,0	1/1:0,18:18:36.12:517,36,0	1/1:0,12:12:33.11:474,33,0
chr10	38779438	.	AGTGTGTGTGTGTGTGT	A	7962.55	PASS	AB=0.786;AC=39;AF=0.750;AN=52;BaseQRankSum=8.577;DP=523;FS=3.472;HRun=0;HaplotypeScore=237.2781;InbreedingCoeff=0.6540;MQ=47.09;MQ0=21;MQRankSum=-8.498;QD=23.42;ReadPosRankSum=2.182;VQSLOD=3.7413;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:37:66.21:0,66,3288	1/1:13,2:13:9.03:395,9,0	./.	./.	0/1:8,3:10:0:0,0,0	1/1:14,9:22:12.04:527,12,0	1/1:22,5:25:2.70:131,3,0	0/0:23,0:20:3.01:0,3,33	1/1:9,3:14:15.05:596,15,0	0/0:15,0:16:21.07:0,21,1026	0/0:17,0:17:30.10:0,30,1385	1/1:10,11:18:17.87:790,18,0	1/1:11,5:15:20.28:703,20,0	1/1:13,5:18:18.06:770,18,0	1/1:16,3:19:9.02:395,9,0	1/1:6,3:10:9.03:375,9,0	1/1:15,5:21:18.06:770,18,0	0/0:17,0:17:30.09:0,30,1373	1/1:18,1:21:9.03:355,9,0	1/1:12,4:16:9.03:395,9,0	0/0:20,0:19:2.97:0,3,20	1/1:14,4:18:6.02:264,6,0	1/1:11,5:16:6.02:263,6,0	1/1:16,3:19:3.01:132,3,0	1/1:19,0:18:3.01:46,3,0	1/1:12,2:13:6.02:264,6,0	1/1:12,5:17:15.05:659,15,0	1/1:3,1:3:3.01:132,3,0
chr10	38779783	.	GTC	G	1805.59	PASS	AB=1.000;AC=39;AF=0.722;AN=54;BaseQRankSum=7.928;DP=486;FS=12.504;HRun=0;HaplotypeScore=117.7617;InbreedingCoeff=0.5930;MQ=50.52;MQ0=14;MQRankSum=-2.900;QD=5.75;ReadPosRankSum=-2.568;VQSLOD=2.1043;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,129,2171	0/1:5,0:5:0:0,0,0	0/0:30,0:10:26.05:0,26,378	0/0:27,0:14:12.18:0,12,336	1/1:8,0:7:5.90:42,6,0	1/1:12,7:16:11.78:131,12,0	1/1:16,3:18:8.70:136,9,0	1/1:16,0:13:16:129,16,0	1/1:13,0:13:11.71:76,12,0	0/0:28,0:26:72.18:0,72,1195	0/0:10,0:10:24.07:0,24,418	1/1:13,0:13:3.96:71,4,0	1/1:11,0:11:17.19:137,17,0	1/1:12,0:11:7.26:72,7,0	1/1:16,0:16:20.81:153,21,0	1/1:15,0:15:10.13:96,10,0	1/1:19,0:19:20.94:140,21,0	0/0:25,0:25:50:0,50,1196	1/1:21,0:17:23.94:187,24,0	1/1:11,0:9:8.91:65,9,0	0/1:35,0:35:50.17:117,0,50	1/1:10,0:10:5.99:51,6,0	1/1:7,0:7:2.71:23,3,0	1/1:20,0:20:3.47:39,3,0	1/1:14,0:12:14.02:109,14,0	0/1:22,0:21:26.79:188,0,27	1/1:0,7:7:2.93:25,3,0	./.
chr10	38779791	.	GTC	G	1554.81	PASS	AB=1.000;AC=38;AF=0.704;AN=54;BaseQRankSum=10.993;DP=468;FS=8.155;HRun=0;HaplotypeScore=121.3094;InbreedingCoeff=0.5554;MQ=43.26;MQ0=14;MQRankSum=-3.628;QD=5.11;ReadPosRankSum=-4.826;VQSLOD=0.6837;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,132,2353	0/0:5,0:4:0:0,0,0	0/0:21,0:7:16.48:0,16,221	0/0:20,0:7:4.98:0,5,105	1/1:7,0:6:5.59:35,6,0	1/1:17,2:16:8.79:108,9,0	1/1:19,2:20:8.53:134,9,0	1/1:15,0:11:13.43:101,13,0	1/1:11,2:13:18.70:131,19,0	0/0:27,0:24:64.10:0,64,1174	0/0:12,0:12:26.73:0,27,407	1/1:12,0:12:9.89:71,10,0	1/1:10,0:10:7.60:64,8,0	1/1:15,0:14:8.36:59,8,0	1/1:18,0:18:19.16:140,19,0	1/1:14,0:14:15.59:106,16,0	1/1:22,0:22:24.81:156,25,0	0/0:28,0:28:62.91:0,63,1294	1/1:18,0:14:9.72:123,10,0	1/1:9,0:7:5.92:41,6,0	0/1:30,0:30:41.21:73,0,41	1/1:12,0:12:5.98:48,6,0	1/1:6,0:6:1.64:22,2,0	1/1:20,1:20:1.62:21,2,0	1/1:13,0:11:8.53:75,9,0	0/1:19,0:18:21.49:196,0,21	1/1:10,0:10:3.88:26,4,0	./.
chr10	38779799	.	GTC	G	1262.11	PASS	AB=0.991;AC=39;AF=0.696;AN=56;BaseQRankSum=10.797;DP=477;FS=1.780;HRun=0;HaplotypeScore=128.0962;InbreedingCoeff=0.4155;MQ=42.68;MQ0=13;MQRankSum=-4.474;QD=3.79;ReadPosRankSum=-6.175;VQSLOD=-0.0893;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,123,2334	0/0:6,0:5:0.89:0,1,3	0/0:16,0:5:10.27:0,10,144	0/1:22,0:6:4.96:5,0,88	1/1:8,0:7:5.87:40,6,0	1/1:22,0:19:0.05:25,0,0	1/1:20,2:21:7.14:116,7,0	1/1:16,0:12:18.81:130,19,0	1/1:13,0:13:18.24:129,18,0	0/0:28,0:25:72.21:0,72,1259	0/0:14,0:14:33.08:0,33,555	1/1:10,0:10:9.52:60,10,0	1/1:14,0:14:16.28:106,16,0	1/1:15,0:14:6.87:52,7,0	1/1:15,0:15:6.46:49,6,0	1/1:11,0:11:8.78:56,9,0	1/1:20,0:20:24.46:137,24,0	0/0:31,0:31:86.28:0,86,1514	0/1:13,0:9:8.40:60,0,8	1/1:11,0:8:5.92:41,6,0	0/1:38,0:37:35.19:35,0,71	0/1:11,0:10:0:0,0,0	1/1:4,1:5:6:55,6,0	1/1:18,2:19:5.89:53,6,0	1/1:14,0:12:2.54:25,3,0	0/1:21,1:21:15.98:228,0,16	1/1:10,0:10:3.88:27,4,0	1/1:1,0:1:1.55:4,2,0
chr10	38779813	.	GTC	G	696.28	PASS	AB=0.983;AC=33;AF=0.589;AN=56;BaseQRankSum=9.883;DP=434;FS=18.037;HRun=0;HaplotypeScore=117.8233;InbreedingCoeff=0.2474;MQ=57.02;MQ0=15;MQRankSum=-6.598;QD=2.51;ReadPosRankSum=-2.762;VQSLOD=-0.0937;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,117,2175	0/0:5,0:3:0.89:0,1,2	0/1:20,0:9:2.85:3,0,105	0/0:33,0:9:0.35:0,0,106	0/1:9,0:8:0:1,0,0	0/1:17,0:15:27.96:28,0,33	0/1:17,3:20:28.40:38,0,28	1/1:8,0:5:8.87:57,9,0	1/1:9,0:9:9.35:66,9,0	0/0:29,0:26:78.23:0,78,1400	0/0:12,0:12:30.09:0,30,523	1/1:3,0:3:2.99:23,3,0	1/1:12,0:12:14.96:87,15,0	1/1:15,0:14:4.23:26,4,0	1/1:13,0:13:2.99:24,3,0	1/1:13,0:13:11.40:71,11,0	1/1:17,0:17:22.79:136,23,0	0/0:31,0:31:87.12:0,87,1453	0/1:7,0:5:14.43:14,0,19	1/1:11,0:8:2.92:17,3,0	0/1:35,1:35:34.83:87,0,35	0/1:15,0:14:0:0,0,0	1/1:2,0:2:3:26,3,0	1/1:15,0:14:2.89:25,3,0	0/1:10,0:10:0.17:0,0,0	0/1:17,0:16:19.81:120,0,20	1/1:8,0:8:0.89:2,1,0	0/0:1,0:1:2.04:0,2,6
chr10	38779838	.	T	TTG	1477.73	PASS	AB=0.885;AC=21;AF=0.375;AN=56;BaseQRankSum=4.606;DP=515;FS=9.533;HRun=0;HaplotypeScore=122.2186;InbreedingCoeff=0.5347;MQ=66.37;MQ0=17;MQRankSum=-2.399;QD=9.07;ReadPosRankSum=-4.157;VQSLOD=1.6180;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:27.53:0,28,1398	0/1:5,0:3:0.43:0,0,0	0/0:60,0:17:12.31:0,12,287	0/0:59,0:23:23.52:0,24,473	1/1:8,0:8:0.89:2,1,0	0/0:11,0:11:10.99:0,11,163	0/0:19,0:19:33.93:0,34,481	1/1:4,6:11:20.97:342,21,0	0/0:15,0:15:2.18:0,2,67	0/0:27,0:27:81.27:0,81,1275	0/1:13,0:13:0.78:1,0,468	0/0:11,0:11:27.05:0,27,348	0/0:11,0:11:22.74:0,23,228	0/1:10,0:10:0.03:0,0,0	1/1:12,0:12:1.77:4,2,0	0/0:9,0:9:13.89:0,14,130	0/0:13,0:13:18.49:0,18,196	0/0:29,0:29:81.27:0,81,1275	0/1:8,1:9:18.34:217,0,18	1/1:3,6:8:6.02:71,6,0	1/1:16,25:43:20.13:355,20,0	0/0:12,0:11:1.90:0,2,25	0/0:3,0:3:1.20:0,1,19	0/0:33,0:33:28.25:0,28,412	1/1:4,8:12:7.69:62,8,0	1/1:6,9:14:3.28:399,3,0	0/1:1,10:11:8.67:53,0,9	1/1:2,1:3:9.03:135,9,0
chr10	38779840	.	TTG	T	590.87	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=4.332;DP=518;FS=3.660;HRun=0;HaplotypeScore=116.9002;InbreedingCoeff=0.7344;MQ=66.85;MQ0=15;MQRankSum=-3.833;QD=9.09;ReadPosRankSum=1.166;VQSLOD=3.3724;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,102,1771	1/1:3,0:3:1.20:34,1,0	0/0:60,0:17:9.72:0,10,286	0/0:61,0:24:21.95:0,22,520	0/0:1,7:8:1.06:0,1,3	0/0:11,0:11:20.53:0,21,321	0/0:19,0:19:45.05:0,45,712	0/0:11,0:11:9.18:0,9,377	1/1:4,12:16:8.89:86,9,0	0/0:27,0:27:81.25:0,81,1451	0/0:13,0:13:38.67:0,39,660	0/0:12,0:12:33.11:0,33,521	1/1:3,8:11:20.25:231,20,0	0/0:0,12:12:0:0,0,0	0/0:1,11:12:2.49:0,2,6	1/1:8,1:9:3.91:160,4,0	1/1:1,12:13:18.82:172,19,0	0/0:31,0:31:84.26:0,84,1494	0/0:9,0:9:24.97:0,25,381	0/0:9,0:8:9.03:0,9,114	0/0:41,1:42:45.82:0,46,579	1/1:2,10:12:4.23:64,4,0	0/0:3,0:3:9.02:0,9,100	0/0:33,0:33:47.91:0,48,725	0/0:12,0:12:12.88:0,13,130	0/0:16,0:15:31.43:0,31,457	0/0:12,0:12:12.32:0,12,147	0/0:3,0:3:9.03:0,9,150
chr10	38780274	.	GCTC	G	4971.38	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=6.625;DP=604;FS=2.048;HRun=0;HaplotypeScore=160.7497;InbreedingCoeff=0.9440;MQ=65.67;MQ0=3;MQRankSum=-8.940;QD=18.83;ReadPosRankSum=0.354;VQSLOD=4.9066;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,102,2136	0/0:2,0:2:6.02:0,6,125	0/0:38,0:31:53.52:0,54,982	0/0:23,0:20:42.10:0,42,763	0/0:22,0:22:29.63:0,30,577	1/1:6,14:16:18.06:269,18,0	1/1:8,32:36:57.19:851,57,0	1/1:6,17:17:27.09:404,27,0	0/0:22,0:22:54.18:0,54,1106	0/0:23,0:23:60.21:0,60,1205	0/0:16,0:16:42.14:0,42,853	1/1:10,20:30:54.16:766,54,0	0/0:22,0:22:30.10:0,30,610	0/0:19,0:19:42.10:0,42,796	0/0:35,0:35:57.13:0,57,1091	0/0:23,0:23:29.67:0,30,602	0/0:24,0:24:33.09:0,33,650	0/0:19,0:19:54.18:0,54,1107	1/1:7,10:15:21.07:314,21,0	1/1:3,10:12:3:45,3,0	1/1:10,18:26:24:358,24,0	0/0:10,0:9:24.08:0,24,502	1/1:2,6:8:12.04:179,12,0	1/1:3,14:17:12.04:179,12,0	1/1:4,9:12:12.04:179,12,0	1/1:7,24:26:51.17:762,51,0	1/1:1,17:17:29.93:441,30,0	1/1:0,6:6:15.05:224,15,0
chr10	38780299	.	CTCCTCCTCG	C	6908.31	PASS	AB=0.969;AC=35;AF=0.625;AN=56;BaseQRankSum=7.574;DP=598;FS=1.314;HRun=0;HaplotypeScore=240.6809;InbreedingCoeff=0.7092;MQ=53.47;MQ0=15;MQRankSum=-7.632;QD=18.72;ReadPosRankSum=-0.857;VQSLOD=3.6605;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,102,3402	1/1:0,2:2:6.02:123,6,0	0/0:32,0:23:32.65:0,33,620	0/0:26,0:19:19.44:0,19,440	1/1:3,17:20:13.82:112,14,0	0/1:22,0:18:21.90:22,0,481	0/1:44,0:36:80.36:80,0,762	1/1:25,2:18:35.21:428,35,0	1/1:17,3:20:59.87:825,60,0	0/0:21,0:21:50.96:0,51,1587	0/0:11,0:11:27.07:0,27,790	0/0:35,0:34:64.01:0,64,1218	1/1:6,10:16:20.15:280,20,0	1/1:10,9:19:36.05:606,36,0	1/1:13,17:30:47.56:653,48,0	1/1:9,15:24:36.59:595,37,0	1/1:6,11:16:6.02:129,6,0	0/0:25,0:25:72.22:0,72,2606	1/1:15,3:15:36.05:598,36,0	1/1:10,2:12:14.57:147,15,0	1/1:15,4:18:22.99:205,23,0	1/1:14,1:12:24.01:270,24,0	0/0:14,0:14:9.16:0,9,94	0/0:23,0:23:7.08:0,7,183	1/1:7,2:9:14.50:113,14,0	0/1:26,3:23:70.19:711,0,70	1/1:18,2:18:43.65:624,44,0	1/1:2,4:6:15.05:389,15,0
chr10	38780325	.	C	CA	742.13	PASS	AB=0.812;AC=15;AF=0.268;AN=56;BaseQRankSum=9.459;DP=539;FS=5.469;HRun=0;HaplotypeScore=224.0064;InbreedingCoeff=-0.2656;MQ=49.87;MQ0=17;MQRankSum=-7.640;QD=2.69;ReadPosRankSum=7.156;VQSLOD=2.2665;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,105,1450	0/0:4,0:4:8.06:0,8,81	0/0:29,0:21:52.08:0,52,702	0/0:31,0:23:31.51:0,32,420	0/1:18,3:21:0.21:0,0,0	0/0:24,0:22:24.04:0,24,258	0/0:34,0:28:66.15:0,66,778	0/0:13,0:9:19.41:0,19,227	0/1:12,9:20:99:124,0,214	0/0:21,0:21:60.20:0,60,830	0/0:13,0:13:39.09:0,39,522	0/1:25,0:24:76.44:76,0,457	0/1:12,5:17:42.58:43,0,53	0/1:15,8:23:61.37:61,0,277	0/1:27,10:37:99:109,0,376	0/1:17,8:25:99:132,0,111	0/1:17,1:17:11.17:11,0,99	0/0:32,0:32:84.26:0,84,1152	0/1:10,4:13:81.85:82,0,149	0/1:3,2:5:3.17:18,0,3	0/0:9,1:9:1.55:0,2,4	0/1:4,3:4:14.78:15,0,36	0/1:10,0:10:14.38:14,0,56	0/1:13,0:13:12.79:13,0,115	0/0:6,3:8:6.01:0,6,78	0/1:9,7:15:99:139,0,137	0/1:14,10:22:53.69:54,0,244	0/0:4,0:4:9.89:0,10,34
chr10	38780326	.	GTCCT	G	1186.55	PASS	AB=0.769;AC=15;AF=0.268;AN=56;BaseQRankSum=9.330;DP=535;FS=1.636;HRun=0;HaplotypeScore=237.5298;InbreedingCoeff=-0.1141;MQ=49.69;MQ0=17;MQRankSum=-7.323;QD=5.03;ReadPosRankSum=7.318;VQSLOD=2.0733;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,105,2711	0/0:4,0:4:7.24:0,7,46	0/0:30,0:21:38.52:0,39,1265	0/0:34,0:23:12.76:0,13,761	0/1:16,3:19:0.01:0,0,1	0/0:5,0:22:24.08:0,24,473	0/0:22,0:27:66.55:0,67,1070	0/0:12,0:8:7.11:0,7,205	0/1:13,9:21:44.52:217,0,45	0/0:21,0:21:63.22:0,63,1673	0/0:13,0:13:39.12:0,39,931	0/0:25,0:24:64.32:0,64,1045	0/1:12,5:17:21.95:83,0,22	0/1:15,8:23:99:123,0,121	0/1:27,10:37:99:145,0,140	0/1:17,8:25:57.74:217,0,58	0/1:16,1:16:20.37:20,0,54	0/0:31,0:31:90.29:0,90,2343	0/1:10,4:13:99:128,0,116	1/1:3,2:5:2.63:21,3,0	1/1:9,1:9:1.24:5,1,0	0/1:4,3:4:25.10:25,0,55	0/0:10,0:10:12.01:0,12,101	0/0:13,0:13:2.33:0,2,195	0/0:6,3:8:2.90:0,3,39	0/1:9,7:15:99:213,0,132	0/1:14,10:22:81.11:135,0,81	0/0:4,0:4:8.94:0,9,29
chr10	38780329	.	CTCCTCG	C	1483.71	PASS	AB=0.998;AC=21;AF=0.375;AN=56;BaseQRankSum=10.170;DP=528;FS=10.633;HRun=0;HaplotypeScore=250.9682;InbreedingCoeff=0.2023;MQ=50.72;MQ0=17;MQRankSum=-9.260;QD=5.93;ReadPosRankSum=2.480;VQSLOD=0.6723;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:93.30:0,93,2603	0/1:4,0:4:2.11:2,0,29	0/0:30,0:21:53.90:0,54,1084	0/0:34,0:24:11.51:0,12,607	0/1:18,0:18:0.01:0,0,1	0/0:23,0:21:18.06:0,18,407	0/0:35,0:29:50.56:0,51,764	1/1:10,2:8:7.08:72,7,0	0/1:22,0:21:25.60:184,0,26	0/0:21,0:21:60.21:0,60,1745	0/0:12,0:12:30.10:0,30,892	0/0:25,0:24:59.84:0,60,867	0/1:15,0:15:1.43:69,0,1	0/1:22,0:22:68.58:133,0,69	0/1:35,1:36:81.66:101,0,82	0/1:23,0:23:5.47:190,0,5	0/1:16,0:15:18.03:18,0,48	0/0:31,0:31:84.27:0,84,2463	1/1:13,1:13:16.58:302,17,0	1/1:4,1:5:3.29:25,3,0	0/0:10,0:9:1.36:0,1,3	1/1:7,0:4:2.45:23,2,0	0/0:10,0:10:9.29:0,9,86	0/1:12,0:12:61.63:62,0,91	0/0:8,1:8:6.38:0,6,32	0/1:16,0:15:93.69:211,0,94	0/1:24,0:22:2.37:224,0,2	1/1:4,0:4:9.58:33,10,0
chr10	38780331	.	C	CGGA	4612.71	PASS	AB=0.932;AC=28;AF=0.500;AN=56;BaseQRankSum=12.368;DP=532;FS=19.395;HRun=0;HaplotypeScore=230.4353;InbreedingCoeff=0.1630;MQ=47.86;MQ0=17;MQRankSum=-12.730;QD=13.85;ReadPosRankSum=3.694;VQSLOD=2.9047;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,105,1825	0/1:4,0:4:8.84:47,0,9	0/0:30,0:21:52.23:0,52,860	0/0:33,0:22:34.52:0,35,688	0/1:17,0:17:0.21:0,0,0	0/1:23,0:21:19.19:19,0,80	0/0:33,0:27:15.82:0,16,458	0/1:12,0:8:80.98:81,0,140	1/1:22,0:21:38.26:429,38,0	0/0:21,0:21:63.22:0,63,1172	0/0:11,0:11:33.10:0,33,584	0/1:24,11:34:99:1142,0,416	1/1:15,0:15:10.32:180,10,0	1/1:22,0:22:31.32:339,31,0	1/1:35,0:35:64.28:515,64,0	0/1:23,0:23:25.57:228,0,26	0/1:16,0:15:7.71:127,0,8	0/0:31,0:31:87.30:0,87,1613	0/1:14,0:13:99:123,0,146	1/1:5,0:5:7.75:110,8,0	1/1:10,0:9:2.88:35,3,0	0/1:7,0:4:8.82:9,0,46	0/1:7,4:11:37:134,0,37	0/1:7,6:13:76.71:226,0,77	1/1:9,0:8:9.45:111,9,0	0/1:16,0:15:84.58:214,0,85	1/1:24,0:22:49.43:543,49,0	0/0:4,0:4:12:0,12,108
chr10	38780334	.	C	CA	1713.38	PASS	AB=0.833;AC=31;AF=0.554;AN=56;BaseQRankSum=8.032;DP=496;FS=17.274;HRun=0;HaplotypeScore=221.9192;InbreedingCoeff=0.7880;MQ=49.82;MQ0=5;MQRankSum=-10.683;QD=7.58;ReadPosRankSum=-0.850;VQSLOD=1.8448;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:96.29:0,96,1304	1/1:2,2:4:6.45:48,6,0	0/0:32,0:23:64.35:0,64,807	0/0:31,0:22:45.52:0,46,520	1/1:8,2:10:0.26:0,0,0	0/0:21,0:20:15.83:0,16,68	0/0:28,0:25:54.86:0,55,469	1/1:6,4:7:10.42:74,10,0	1/1:15,7:21:20.17:179,20,0	0/0:20,0:20:60.20:0,60,836	0/0:10,0:10:30.10:0,30,419	0/0:33,0:33:71.52:0,72,781	1/1:11,4:15:13.68:114,14,0	1/1:13,9:22:17.41:197,17,0	1/1:19,14:33:39.22:357,39,0	1/1:14,5:19:12.85:123,13,0	1/1:4,6:10:15.89:108,16,0	0/0:31,0:31:84.26:0,84,1156	1/1:13,1:13:13.94:66,14,0	1/1:4,1:5:10.10:61,10,0	1/1:8,2:10:2.76:21,3,0	0/0:5,0:4:1.36:0,1,3	0/0:11,0:11:12.01:0,12,115	0/0:12,0:12:14.38:0,14,137	1/1:6,3:8:13.99:103,14,0	0/1:12,3:15:13.26:129,0,13	1/1:14,10:23:46.88:335,47,0	1/1:4,0:4:2.33:5,2,0
chr10	38780335	.	G	GAC	983.92	PASS	AB=0.749;AC=19;AF=0.339;AN=56;BaseQRankSum=4.728;DP=502;FS=8.495;HRun=0;HaplotypeScore=230.3388;InbreedingCoeff=-0.0077;MQ=49.82;MQ0=5;MQRankSum=-7.262;QD=4.39;ReadPosRankSum=-1.571;VQSLOD=1.3503;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:93.30:0,93,1485	0/1:2,2:4:29.35:32,0,29	0/0:33,0:24:56.38:0,56,888	0/0:35,0:24:33.67:0,34,560	1/1:8,2:10:0.09:0,0,0	0/0:21,0:20:17.83:0,18,127	0/0:31,0:28:56.78:0,57,635	0/1:6,4:7:41.54:42,0,101	0/1:15,7:21:97.56:98,0,124	0/0:20,0:20:60.20:0,60,975	0/0:10,0:10:30.10:0,30,489	0/0:25,0:33:71.74:0,72,726	0/1:11,4:15:55.31:55,0,61	0/1:13,9:22:99:124,0,103	0/1:19,14:33:35.04:233,0,35	0/1:14,5:19:51.97:52,0,164	0/1:4,6:10:26.31:72,0,26	0/0:30,0:30:84.26:0,84,1343	0/1:14,1:14:26.07:26,0,157	1/1:4,1:5:7.64:38,8,0	1/1:9,2:11:3.40:18,3,0	0/0:5,0:4:5.85:0,6,54	0/0:8,0:11:11.95:0,12,109	0/0:10,0:12:8.45:0,8,64	1/1:6,3:8:13.48:85,13,0	0/1:12,3:15:83.17:83,0,157	0/1:14,10:23:40.51:191,0,41	0/0:4,0:4:12.04:0,12,148
chr10	38780337	.	C	CAGA	7710.98	PASS	AB=0.950;AC=37;AF=0.661;AN=56;BaseQRankSum=14.321;DP=560;FS=18.744;HRun=0;HaplotypeScore=243.5423;InbreedingCoeff=0.6787;MQ=49.65;MQ0=7;MQRankSum=-11.770;QD=22.35;ReadPosRankSum=3.035;VQSLOD=3.5326;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:93.30:0,93,1699	1/1:2,2:4:7.84:108,8,0	0/0:35,0:26:30.14:0,30,896	0/0:34,0:24:26.75:0,27,688	1/1:11,2:13:2.80:49,3,0	0/0:21,0:20:14.47:0,14,76	0/0:29,0:26:57.61:0,58,702	1/1:14,4:15:38.44:522,38,0	1/1:16,7:22:58.35:692,58,0	0/0:20,0:20:60.21:0,60,1115	0/0:10,0:10:30.10:0,30,559	0/1:34,0:34:99:345,0,291	1/1:17,4:20:42.93:582,43,0	1/1:18,9:27:53.70:730,54,0	1/1:24,14:38:78.08:1089,78,0	1/1:14,5:19:51.64:614,52,0	1/1:11,6:17:24.72:350,25,0	0/0:31,0:31:93.29:0,93,1638	1/1:20,1:18:38.46:393,38,0	1/1:7,1:8:12.04:191,12,0	1/1:11,2:13:8.90:136,9,0	1/1:6,0:5:4.80:31,5,0	0/1:11,0:11:35.64:36,0,36	1/1:13,0:13:6.50:68,6,0	1/1:7,3:9:9.50:203,9,0	0/1:14,3:17:5.96:536,0,6	1/1:18,10:27:71.23:1006,71,0	1/1:4,0:4:9.23:31,9,0
chr10	38780347	.	A	AGACTCG	15719.66	PASS	AB=0.985;AC=41;AF=0.732;AN=56;BaseQRankSum=10.248;DP=592;FS=29.373;HRun=0;HaplotypeScore=255.0162;InbreedingCoeff=0.6926;MQ=51.77;MQ0=4;MQRankSum=-12.132;QD=36.30;ReadPosRankSum=-2.706;VQSLOD=2.5248;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:86.73:0,87,1824	1/1:6,0:6:15.02:312,15,0	0/0:30,0:23:38.70:0,39,877	0/0:35,0:27:43.24:0,43,819	1/1:13,0:13:8.43:66,8,0	0/1:21,0:20:22.85:29,0,23	0/1:27,0:24:24.35:24,0,374	1/1:20,0:17:41.50:670,42,0	1/1:19,7:29:59.83:1537,60,0	0/0:19,0:19:48.16:0,48,1091	0/0:10,0:10:30.10:0,30,676	1/1:35,0:35:86.53:1047,87,0	1/1:22,0:21:44.80:936,45,0	1/1:31,0:31:69.06:1524,69,0	1/1:38,0:38:84.15:2131,84,0	1/1:21,0:21:54.16:1234,54,0	1/1:18,0:18:28.33:582,28,0	0/0:29,0:29:87.30:0,87,1957	1/1:24,0:21:47.97:800,48,0	1/1:10,0:10:12:309,12,0	1/1:15,0:15:20.20:326,20,0	1/1:6,0:6:11.92:125,12,0	1/1:12,0:12:6.01:58,6,0	1/1:15,0:15:24.62:298,25,0	1/1:9,0:9:15.01:422,15,0	0/1:20,0:21:9.31:1056,0,9	1/1:32,0:31:80.87:1971,81,0	1/1:6,0:6:15.03:263,15,0
chr10	38780361	.	CCAG	C	1125.89	PASS	AB=0.957;AC=7;AF=0.125;AN=56;BaseQRankSum=3.005;DP=569;FS=5.548;HRun=0;HaplotypeScore=207.7398;InbreedingCoeff=0.7712;MQ=59.83;MQ0=2;MQRankSum=-3.836;QD=15.21;ReadPosRankSum=-0.173;VQSLOD=3.0608;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:84.27:0,84,1653	0/0:5,0:5:15.05:0,15,295	0/0:24,0:22:17.38:0,17,556	0/0:34,0:31:52.05:0,52,930	0/0:11,0:11:14.89:0,15,307	0/0:27,0:26:27.09:0,27,543	0/0:27,0:25:66.23:0,66,1361	0/0:18,0:16:33.11:0,33,672	0/0:28,0:27:39.13:0,39,754	0/0:15,0:15:30.10:0,30,557	0/0:11,0:11:21.07:0,21,421	1/1:8,17:25:54.14:758,54,0	0/0:26,0:25:57.20:0,57,1164	0/0:26,0:26:54.19:0,54,1099	0/0:35,0:35:84.29:0,84,1702	0/0:19,0:19:39.13:0,39,803	0/0:17,0:17:24.08:0,24,494	0/0:31,0:31:75.23:0,75,1488	0/1:21,1:20:19.71:20,0,398	0/0:10,0:10:14.86:0,15,296	0/0:18,0:18:23.74:0,24,455	0/0:9,0:8:11.72:0,12,246	1/1:4,5:9:9.03:124,9,0	1/1:11,6:18:32.65:368,33,0	0/0:10,0:10:14.86:0,15,268	0/0:22,0:22:43.34:0,43,788	0/0:31,0:31:75.26:0,75,1542	0/0:3,0:3:9.03:0,9,168
chr10	38780793	.	A	AT	10733.58	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-12.895;DP=541;FS=1.640;HRun=8;HaplotypeScore=49.9580;InbreedingCoeff=0.9940;MQ=68.60;MQ0=0;MQRankSum=0.837;QD=27.74;ReadPosRankSum=-0.140;VQSLOD=5.1801;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:69.01:0,69,625	1/1:0,6:6:17.95:189,18,0	0/0:11,0:11:16.35:0,16,163	0/0:13,0:12:27.01:0,27,245	1/1:0,28:28:81.09:888,81,0	1/1:3,18:20:51.15:589,51,0	1/1:1,14:15:39.12:450,39,0	1/1:3,22:25:66.16:739,66,0	1/1:3,15:18:39.12:450,39,0	0/0:18,0:18:48.02:0,48,439	0/0:22,0:22:65.99:0,66,595	0/0:15,0:15:39.02:0,39,357	1/1:3,19:22:51.13:577,51,0	1/1:1,14:15:33.10:381,33,0	1/1:2,18:20:45.13:519,45,0	1/1:3,15:18:42.12:485,42,0	1/1:3,22:25:35.91:665,36,0	0/0:28,0:28:78.03:0,78,714	1/1:3,16:18:48.13:543,48,0	1/1:3,23:26:69.08:752,69,0	1/1:4,11:15:30.09:346,30,0	1/1:4,14:18:42.12:485,42,0	0/0:7,0:7:15.01:0,15,137	0/0:16,0:16:48.03:0,48,439	1/1:2,17:19:51.14:580,51,0	1/1:5,30:35:90.26:1029,90,0	1/1:2,22:23:53.37:652,53,0	1/1:4,14:18:36.11:415,36,0
chr10	38781159	.	G	GT	4153.59	PASS	AB=0.769;AC=34;AF=0.607;AN=56;BaseQRankSum=-8.417;DP=562;FS=16.485;HRun=14;HaplotypeScore=61.1970;InbreedingCoeff=0.7946;MQ=67.85;MQ0=0;MQRankSum=-1.249;QD=10.87;ReadPosRankSum=-3.558;VQSLOD=0.5804;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,2:27:25.66:0,26,286	1/1:2,12:14:13.68:237,14,0	0/0:13,0:11:18.49:0,18,118	0/0:10,0:11:8.14:0,8,50	0/1:14,20:37:11.95:387,0,12	0/0:2,0:17:26.46:0,26,76	0/0:7,0:13:16.99:0,17,81	1/1:11,10:21:29.92:249,30,0	1/1:5,11:16:9:79,9,0	0/0:21,2:23:11.87:0,12,203	0/1:27,3:31:0.68:1,0,242	0/0:6,0:18:12.12:0,12,35	1/1:7,11:20:26.71:205,27,0	1/1:2,8:12:8.76:58,9,0	1/1:10,9:18:41.80:344,42,0	1/1:5,20:25:7.68:183,8,0	1/1:3,1:16:17.18:95,17,0	0/0:15,3:19:7.90:0,8,171	1/1:8,11:20:38.57:293,39,0	1/1:18,12:30:38:430,38,0	1/1:0,4:5:11.84:93,12,0	1/1:8,15:24:10.57:206,11,0	0/0:5,0:21:26.40:0,26,76	0/0:5,0:14:17.12:0,17,60	1/1:9,16:26:22.56:311,23,0	1/1:11,16:28:24.83:354,25,0	1/1:2,18:22:44.77:369,45,0	1/1:7,8:16:4.62:260,5,0
chr10	38782276	.	GT	G	5138.24	PASS	AB=0.832;AC=39;AF=0.696;AN=56;BaseQRankSum=6.442;DP=505;FS=9.411;HRun=12;HaplotypeScore=62.5687;InbreedingCoeff=0.7149;MQ=66.04;MQ0=7;MQRankSum=-1.122;QD=13.59;ReadPosRankSum=1.597;VQSLOD=4.7437;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:53.78:0,54,693	0/1:3,4:7:12.46:93,0,12	0/1:25,2:13:30.20:30,0,39	0/1:21,0:14:1.07:1,0,38	1/1:3,19:23:47.33:382,47,0	1/1:3,19:22:41.82:325,42,0	1/1:1,4:5:11.95:93,12,0	1/1:9,19:27:55.64:410,56,0	1/1:5,14:19:32.85:255,33,0	0/0:25,0:25:43.48:0,43,579	0/0:17,0:17:39.07:0,39,392	0/0:12,0:12:36.05:0,36,358	1/1:2,22:24:50.79:394,51,0	1/1:3,11:14:34.90:261,35,0	1/1:1,11:12:20.91:163,21,0	1/1:0,14:14:26.81:209,27,0	1/1:2,24:25:11.40:430,11,0	0/0:24,4:28:4.40:0,4,381	1/1:6,11:17:36.92:267,37,0	1/1:4,12:16:2.42:202,2,0	1/1:2,5:7:14.94:116,15,0	1/1:2,7:9:17.92:139,18,0	0/0:13,0:13:33.05:0,33,328	0/0:4,0:4:9:0,9,84	1/1:2,14:15:41.84:325,42,0	1/1:5,22:27:32.32:434,32,0	1/1:4,21:24:44.63:331,45,0	1/1:3,11:14:35.86:278,36,0
chr10	38782781	.	A	AT	9867.71	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=0.353;DP=626;FS=1.173;HRun=7;HaplotypeScore=75.7955;InbreedingCoeff=0.9860;MQ=88.98;MQ0=1;MQRankSum=-4.227;QD=21.13;ReadPosRankSum=2.752;VQSLOD=4.6374;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,129,1246	1/1:1,0:4:8.59:44,9,0	0/0:27,0:27:46.43:0,46,534	0/0:21,0:21:42.05:0,42,403	1/1:1,0:17:46.15:245,46,0	1/1:5,1:22:46:234,46,0	1/1:2,0:22:51.72:263,52,0	1/1:4,16:20:48.15:580,48,0	1/1:5,0:38:89.19:458,89,0	0/0:32,0:32:90.14:0,90,869	0/0:12,0:12:33.05:0,33,319	1/1:2,21:24:54.03:631,54,0	1/1:0,1:23:51.89:285,52,0	1/1:5,0:31:69.06:356,69,0	1/1:4,2:26:57.70:335,58,0	1/1:2,0:17:34.50:175,35,0	1/1:3,0:26:63.06:318,63,0	0/0:19,0:19:51.08:0,51,492	1/1:4,11:15:36.09:421,36,0	1/1:0,8:8:21.06:254,21,0	1/1:3,31:34:87.27:1051,87,0	1/1:3,0:12:28.77:149,29,0	1/1:2,11:13:33.10:399,33,0	1/1:1,16:17:42.13:507,42,0	1/1:0,13:13:39.12:471,39,0	1/1:5,41:46:74.44:1459,74,0	1/1:0,20:20:57.17:689,57,0	1/1:0,17:17:45.14:544,45,0
chr10	38783479	.	G	GT	7310.50	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-15.219;DP=616;FS=0.000;HRun=6;HaplotypeScore=55.4411;InbreedingCoeff=0.9972;MQ=73.47;MQ0=0;MQRankSum=0.040;QD=31.65;ReadPosRankSum=3.395;VQSLOD=5.0995;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,114,1162	1/1:0,8:8:24.08:302,24,0	0/0:21,0:20:45.04:0,45,442	0/0:13,0:13:32.95:0,33,307	1/1:3,15:18:45.14:566,45,0	1/1:0,23:23:66.21:830,66,0	1/1:3,23:26:63.20:793,63,0	0/0:19,0:19:48.09:0,48,481	1/1:2,15:17:39.12:491,39,0	0/0:24,0:24:63.13:0,63,642	0/0:12,0:12:33.04:0,33,327	0/0:25,0:25:72.13:0,72,719	1/1:3,19:22:60.19:753,60,0	1/1:4,19:23:51.16:632,51,0	1/1:2,29:31:84.27:1057,84,0	1/1:2,11:13:30.10:378,30,0	1/1:5,20:25:51.16:642,51,0	0/0:22,0:22:63.14:0,63,643	0/0:31,0:31:81.18:0,81,826	0/0:19,0:19:45.10:0,45,459	0/0:31,0:31:84.17:0,84,849	1/1:2,23:25:69.22:868,69,0	0/0:20,0:20:51.06:0,51,502	0/0:31,0:31:81.18:0,81,826	0/0:11,0:11:33.04:0,33,327	0/0:31,0:31:93.19:0,93,938	0/0:25,0:25:60.11:0,60,605	0/0:5,0:5:15.03:0,15,153
chr10	38783913	.	G	GA	4061.14	PASS	AB=0.724;AC=36;AF=0.643;AN=56;BaseQRankSum=-2.916;DP=548;FS=9.751;HRun=13;HaplotypeScore=66.8969;InbreedingCoeff=0.2997;MQ=59.00;MQ0=22;MQRankSum=-0.557;QD=10.36;ReadPosRankSum=-0.389;VQSLOD=2.2214;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:52,1:53:44.49:0,44,547	1/1:3,13:16:14.71:120,15,0	0/1:15,0:5:0.15:0,0,46	0/1:7,0:4:5.58:6,0,9	0/1:10,19:27:6.39:323,0,6	0/1:5,8:14:9.40:94,0,9	0/1:4,6:10:5.29:97,0,5	1/1:10,11:22:17.59:241,18,0	1/1:8,0:8:7.28:76,7,0	0/0:21,0:21:38.56:0,39,263	0/0:21,0:21:52.47:0,52,348	1/1:3,9:12:21.02:195,21,0	0/1:5,3:8:15.73:21,0,16	1/1:5,5:10:11.85:98,12,0	1/1:5,14:16:26.98:242,27,0	1/1:0,12:12:21.02:195,21,0	0/1:13,25:38:36.84:408,0,37	0/0:30,1:30:33.87:0,34,391	1/1:3,12:13:32.25:322,32,0	1/1:4,15:20:22.04:289,22,0	0/1:6,5:11:26.02:69,0,26	1/1:4,8:12:26.78:222,27,0	1/1:14,7:21:36.37:295,36,0	0/1:7,5:11:29.10:44,0,29	0/0:25,0:27:52.39:0,52,347	1/1:10,19:30:11.76:434,12,0	0/1:15,18:33:8.60:218,0,9	1/1:8,7:10:6.01:56,6,0
chr10	38784699	.	G	GA	3726.47	PASS	AB=0.849;AC=39;AF=0.696;AN=56;BaseQRankSum=1.223;DP=529;FS=2.838;HRun=14;HaplotypeScore=87.7743;InbreedingCoeff=0.2563;MQ=75.75;MQ0=3;MQRankSum=-1.092;QD=8.39;ReadPosRankSum=-3.061;VQSLOD=2.3327;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,1:22:13.94:0,14,203	0/1:8,2:11:33.05:67,0,33	0/1:47,0:21:7.93:23,0,8	0/0:39,0:26:7.03:0,7,60	0/1:6,6:13:4.43:79,0,4	0/0:12,0:13:19.66:0,20,119	0/0:10,0:11:22.72:0,23,140	1/1:14,1:31:52.53:289,53,0	1/1:11,4:16:1.60:121,2,0	0/1:15,2:17:20.19:20,0,140	0/1:10,0:10:2.03:2,0,91	0/1:11,2:13:13.33:125,0,13	0/1:6,6:11:5.12:112,0,5	0/1:9,2:11:7.47:54,0,7	1/1:4,7:11:29.89:250,30,0	1/1:14,6:21:32.80:266,33,0	1/1:22,15:42:4.43:517,4,0	0/1:19,2:22:3.34:3,0,226	1/1:11,2:22:40.81:257,41,0	1/1:7,0:22:45.81:247,46,0	1/1:9,1:16:25.60:118,26,0	1/1:8,4:13:4.44:95,4,0	1/1:13,4:18:6.80:191,7,0	1/1:5,17:24:47.67:398,48,0	1/1:7,1:14:34.66:201,35,0	1/1:9,0:18:21.54:123,22,0	1/1:3,1:13:28.57:154,29,0	1/1:1,1:5:2.84:14,3,0
chr10	38784891	.	AAAAAAAGAAAG	A	3017.61	PASS	AB=0.983;AC=12;AF=0.214;AN=56;BaseQRankSum=1.949;DP=459;FS=7.811;HRun=0;HaplotypeScore=140.9486;InbreedingCoeff=0.4712;MQ=56.65;MQ0=24;MQRankSum=-3.013;QD=22.19;ReadPosRankSum=1.572;VQSLOD=2.5153;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:19:44.98:0,45,1012	0/0:4,0:4:11.40:0,11,206	0/0:44,0:9:6.96:0,7,53	0/0:36,0:11:6.15:0,6,74	0/0:14,0:14:18.22:0,18,376	0/0:13,0:13:30.37:0,30,785	0/0:8,0:7:10.75:0,11,180	0/1:19,0:15:20.96:103,0,21	0/0:14,0:12:21.07:0,21,455	0/0:21,0:20:53.82:0,54,1110	0/0:26,0:23:51.35:0,51,1231	0/0:13,0:11:15.80:0,16,399	0/0:13,0:11:30.09:0,30,640	0/0:12,0:11:13.27:0,13,276	0/0:11,0:10:14.60:0,15,444	0/0:11,0:11:12.04:0,12,261	0/0:25,0:25:41.80:0,42,1045	0/0:13,0:13:23.85:0,24,731	1/1:9,0:8:0.71:207,1,0	0/1:21,0:19:26.96:290,0,27	1/1:7,0:6:5.77:87,6,0	0/0:3,0:3:9.03:0,9,147	0/0:11,0:9:24.07:0,24,760	0/0:8,0:7:18.05:0,18,309	1/1:15,5:20:14.57:996,15,0	0/1:22,0:21:63.25:516,0,63	1/1:11,13:23:12.46:702,12,0	0/1:13,1:12:1.11:272,0,1
chr10	38784892	.	AAAAAAGAAAG	A	3619.40	PASS	AB=0.938;AC=17;AF=0.304;AN=56;BaseQRankSum=0.683;DP=454;FS=2.295;HRun=0;HaplotypeScore=131.6742;InbreedingCoeff=0.6646;MQ=56.73;MQ0=22;MQRankSum=-3.338;QD=18.95;ReadPosRankSum=0.060;VQSLOD=2.9798;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:18:39.23:0,39,886	0/0:4,0:4:9.03:0,9,173	0/1:43,0:8:9.75:10,0,46	0/0:35,0:11:4.75:0,5,36	0/0:13,0:13:18.97:0,19,293	0/0:13,0:13:30.95:0,31,684	0/0:8,0:7:13.75:0,14,169	1/1:19,0:15:17.23:166,17,0	0/0:15,0:13:24.05:0,24,427	0/0:21,0:20:51.08:0,51,996	0/0:27,0:24:52:0,52,1122	0/1:13,0:11:4.55:5,0,347	0/0:13,0:11:30.10:0,30,580	0/0:12,0:11:12.92:0,13,242	0/0:10,0:9:18.70:0,19,376	0/0:11,0:11:12.03:0,12,216	0/0:24,0:24:25.58:0,26,859	0/0:13,0:13:34.73:0,35,713	1/1:3,6:8:14.60:282,15,0	1/1:20,1:19:15.37:526,15,0	1/1:7,0:6:14.48:163,14,0	0/0:3,0:3:9.03:0,9,118	0/0:11,0:9:24.07:0,24,709	0/0:8,0:7:18.01:0,18,274	1/1:20,0:20:46.55:825,47,0	0/1:17,5:21:44.72:740,0,45	1/1:24,0:23:22.48:603,22,0	1/1:8,5:11:0.14:300,0,0
chr10	38784896	.	AAG	A	1120.58	PASS	AB=0.988;AC=22;AF=0.393;AN=56;BaseQRankSum=3.252;DP=442;FS=21.888;HRun=0;HaplotypeScore=87.3880;InbreedingCoeff=0.4388;MQ=53.78;MQ0=20;MQRankSum=-6.146;QD=4.38;ReadPosRankSum=-0.639;VQSLOD=0.4147;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:19:47.56:48,0,202	0/0:4,0:4:9.36:0,9,57	0/1:34,0:5:5.77:6,0,14	0/0:29,1:10:9.67:0,10,48	0/0:12,0:12:21.67:0,22,78	0/0:14,0:14:28.33:0,28,195	0/0:9,0:8:16.18:0,16,91	1/1:18,1:15:1.66:94,2,0	0/0:15,0:13:1.04:0,1,125	0/1:20,0:19:11.60:12,0,207	0/1:23,2:22:63.29:63,0,266	0/0:14,0:12:11.69:0,12,124	0/1:15,0:13:14.14:14,0,125	0/1:13,0:12:12.75:13,0,71	0/0:11,0:10:18.54:0,19,103	0/0:12,0:12:5.49:0,5,67	0/0:25,0:25:22.16:0,22,215	0/0:15,0:15:19.17:0,19,227	1/1:8,1:8:18.12:122,18,0	1/1:18,0:16:28.01:220,28,0	1/1:8,0:7:8.91:39,9,0	0/0:3,0:3:5.75:0,6,19	0/0:13,0:11:29.69:0,30,276	0/0:9,0:8:12.52:0,13,103	1/1:20,0:20:10.69:194,11,0	1/1:19,0:19:23.03:255,23,0	1/1:22,0:21:23.40:161,23,0	1/1:10,0:9:13.83:72,14,0
chr10	38784901	.	AG	A	659.95	PASS	AB=1.000;AC=10;AF=0.179;AN=56;BaseQRankSum=6.174;DP=400;FS=4.026;HRun=1;HaplotypeScore=76.5265;InbreedingCoeff=0.1599;MQ=50.67;MQ0=17;MQRankSum=-4.733;QD=5.74;ReadPosRankSum=2.413;VQSLOD=0.9422;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,1:16:32.86:0,33,457	0/0:5,0:5:15.03:0,15,187	0/0:22,0:3:8.24:0,8,78	0/0:25,0:7:5.47:0,5,47	0/0:12,0:12:30.10:0,30,378	0/0:15,0:15:42.01:0,42,537	0/0:7,0:7:15.04:0,15,182	0/1:18,0:14:26.45:113,0,26	0/0:17,0:15:23.42:0,23,371	0/0:15,0:14:32.59:0,33,457	0/0:21,0:18:23.68:0,24,504	0/0:13,0:11:20.57:0,21,254	0/0:17,1:16:28.34:0,28,393	0/0:13,0:12:15.27:0,15,161	0/0:12,0:11:33.08:0,33,398	0/0:11,0:11:17.82:0,18,196	0/0:21,0:22:42.44:0,42,708	0/0:13,0:13:23.08:0,23,417	0/1:8,0:8:6.97:64,0,7	0/1:14,0:12:24.24:180,0,24	0/1:6,0:5:20.98:29,0,21	0/0:3,0:3:9.03:0,9,115	0/0:13,0:11:33.09:0,33,453	0/0:8,0:7:4.64:0,5,175	0/1:20,0:20:99:127,0,149	0/1:19,0:18:44.51:196,0,45	1/1:19,2:20:9.27:66,9,0	1/1:9,0:8:1.70:28,2,0
chr10	38785203	.	TC	T	2064.72	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=2.678;DP=547;FS=13.159;HRun=1;HaplotypeScore=82.9369;InbreedingCoeff=0.9094;MQ=54.17;MQ0=26;MQRankSum=-6.785;QD=18.27;ReadPosRankSum=-1.711;VQSLOD=2.4270;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:41.91:0,42,617	1/1:4,1:5:5.65:61,6,0	0/0:65,4:13:3.65:0,4,70	0/0:83,1:22:18.36:0,18,197	1/1:13,3:16:47.24:414,47,0	0/0:16,0:16:21.21:0,21,120	0/0:9,0:8:11.78:0,12,63	0/0:25,0:24:40.53:0,41,389	1/1:18,2:20:50.63:439,51,0	0/0:10,0:10:26.98:0,27,277	0/0:12,0:12:9.90:0,10,268	0/0:9,0:9:5.74:0,6,72	1/1:10,1:10:27.02:256,27,0	1/1:11,1:11:27.88:205,28,0	1/1:6,2:8:17.93:153,18,0	1/1:9,3:12:32.91:304,33,0	1/1:18,3:20:14:286,14,0	0/0:20,0:20:37.40:0,37,516	0/0:22,0:20:26.55:0,27,315	0/0:21,0:20:53.52:0,54,455	0/0:3,0:3:8.96:0,9,69	1/1:8,0:8:16.03:153,16,0	0/0:15,0:14:19.94:0,20,118	0/0:17,0:17:25.57:0,26,137	0/0:19,1:20:24.91:0,25,400	0/0:22,0:22:34.38:0,34,386	0/0:26,0:26:56.36:0,56,585	0/0:10,0:10:23.83:0,24,202
chr10	38785204	.	C	CT	1103.51	PASS	AB=0.985;AC=22;AF=0.393;AN=56;BaseQRankSum=-4.796;DP=551;FS=7.881;HRun=11;HaplotypeScore=91.0866;InbreedingCoeff=0.3512;MQ=54.89;MQ0=28;MQRankSum=3.025;QD=3.50;ReadPosRankSum=-4.260;VQSLOD=-0.5501;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:24:12.93:13,0,189	0/1:5,0:5:3.45:3,0,4	0/1:72,0:14:0.48:35,0,0	0/0:82,0:21:0.73:0,1,72	0/1:15,0:15:0.84:1,0,12	0/0:9,0:17:31.03:0,31,102	0/0:4,0:8:10.18:0,10,29	1/1:25,0:24:21.16:197,21,0	0/0:18,0:18:13.10:0,13,56	0/0:11,0:11:11.88:0,12,87	0/1:12,0:12:11.49:11,0,68	0/0:9,0:9:7.66:0,8,22	0/0:11,0:10:4.88:0,5,17	0/0:12,0:11:15.69:0,16,66	0/1:8,0:8:0.02:0,0,15	0/0:12,0:12:8.42:0,8,29	0/1:23,0:22:1.49:1,0,30	0/0:19,0:20:36.65:0,37,281	0/1:23,0:21:1.21:120,0,1	1/1:8,13:20:32.95:256,33,0	1/1:3,0:3:3:26,3,0	0/1:7,1:8:6.96:8,0,7	0/0:15,0:15:12.33:0,12,37	0/0:16,0:16:16.28:0,16,47	1/1:20,0:20:30.97:237,31,0	1/1:20,0:20:23.12:177,23,0	0/1:25,1:26:11.08:165,0,11	1/1:10,0:10:4.26:19,4,0
chr10	38785213	.	TTTG	T	1673.26	PASS	AB=0.966;AC=24;AF=0.429;AN=56;BaseQRankSum=3.738;DP=562;FS=10.020;HRun=0;HaplotypeScore=102.4196;InbreedingCoeff=-0.0375;MQ=52.16;MQ0=35;MQRankSum=-3.806;QD=6.80;ReadPosRankSum=2.478;VQSLOD=1.7904;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:57.30:0,57,951	1/1:6,0:6:2.63:11,3,0	0/0:88,0:12:18.66:0,19,143	0/0:87,0:21:6.19:0,6,176	0/1:14,0:14:46.71:52,0,47	1/1:17,0:17:30.15:476,30,0	1/1:10,0:9:20.98:217,21,0	0/1:20,0:19:17.82:18,0,249	0/1:19,0:19:47.49:47,0,112	0/0:9,0:9:24.06:0,24,347	0/0:12,0:12:36.01:0,36,488	1/1:0,9:9:12.04:191,12,0	0/1:8,0:7:15.10:47,0,15	0/1:10,0:9:32.57:33,0,48	0/1:9,0:9:10.94:11,0,22	0/1:12,0:12:8.21:8,0,85	0/0:21,0:20:16.02:0,16,152	0/0:28,0:28:83.83:0,84,1299	0/1:21,0:20:50.40:50,0,253	0/0:22,0:21:33.14:0,33,562	0/1:3,0:3:24.80:33,0,25	0/1:11,0:11:9.21:9,0,54	1/1:3,15:17:15.08:226,15,0	0/1:1,14:15:14.32:358,0,14	0/1:22,0:22:46.07:46,0,454	0/1:17,0:17:9.16:9,0,324	0/0:25,0:25:13.09:0,13,594	0/1:5,0:5:10.16:10,0,87
chr10	38785224	.	GGGT	G	1948.65	PASS	AB=0.976;AC=20;AF=0.357;AN=56;BaseQRankSum=5.607;DP=471;FS=3.791;HRun=0;HaplotypeScore=91.4444;InbreedingCoeff=0.8330;MQ=57.03;MQ0=27;MQRankSum=-2.999;QD=15.59;ReadPosRankSum=2.842;VQSLOD=3.4670;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:48.07:0,48,843	1/1:6,0:6:7.41:62,7,0	0/0:73,0:16:21.67:0,22,335	0/0:69,0:21:39.43:0,39,383	1/1:16,0:16:28.32:256,28,0	1/1:5,10:15:45.07:644,45,0	1/1:3,6:9:26.99:337,27,0	0/0:14,0:13:33.06:0,33,377	1/1:8,4:12:10.18:212,10,0	0/0:7,0:7:15.05:0,15,291	0/0:11,0:11:33.10:0,33,618	0/0:9,0:9:16.51:0,17,116	1/1:8,0:7:16.68:152,17,0	1/1:11,0:10:17.05:128,17,0	1/1:9,0:9:11.38:69,11,0	0/1:8,0:8:0.53:92,0,1	0/1:19,1:20:9.01:64,0,9	0/0:31,0:31:93.12:0,93,1641	0/0:14,0:14:32.85:0,33,461	0/0:12,0:11:32.59:0,33,364	0/0:2,0:2:5.99:0,6,54	1/1:11,0:11:17.36:138,17,0	0/0:16,0:15:11.84:0,12,141	0/0:16,0:16:32.97:0,33,291	0/0:17,0:17:39.73:0,40,497	0/0:10,0:10:26.78:0,27,338	0/0:23,0:23:62.02:0,62,850	0/0:5,0:5:12.03:0,12,173
chr10	38785225	.	GGT	G	2232.79	PASS	AB=0.986;AC=23;AF=0.411;AN=56;BaseQRankSum=5.394;DP=458;FS=1.030;HRun=0;HaplotypeScore=82.4631;InbreedingCoeff=0.8273;MQ=57.48;MQ0=27;MQRankSum=-4.399;QD=11.57;ReadPosRankSum=2.422;VQSLOD=3.4258;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:46.92:0,47,668	1/1:1,5:6:7.80:96,8,0	0/1:67,1:15:2.74:3,0,257	0/0:66,0:20:3.36:0,3,205	1/1:5,10:16:29.97:320,30,0	1/1:13,0:15:45.01:428,45,0	1/1:9,0:10:29.76:277,30,0	0/0:14,0:13:32.84:0,33,277	1/1:8,3:11:9.41:222,9,0	0/0:8,0:8:18.05:0,18,262	0/0:11,0:11:33.07:0,33,467	0/0:8,0:8:17.16:0,17,111	1/1:5,3:7:18.02:204,18,0	1/1:4,7:10:18.04:212,18,0	1/1:8,1:9:11.98:153,12,0	1/1:6,1:7:3.38:137,3,0	1/1:7,12:19:5.37:142,5,0	0/0:31,0:31:90.12:0,90,1300	0/0:15,0:15:33.56:0,34,325	0/0:12,0:11:29.53:0,30,250	0/0:2,0:2:5.30:0,5,25	1/1:10,1:11:19.60:245,20,0	0/0:16,0:15:7.92:0,8,98	0/0:16,0:16:32.72:0,33,234	0/0:14,0:14:35.52:0,36,319	0/0:10,0:10:23.94:0,24,244	0/0:20,0:20:53.92:0,54,558	0/0:5,0:5:11.85:0,12,116
chr10	38785226	.	GTT	G	1358.39	PASS	AB=0.985;AC=24;AF=0.429;AN=56;BaseQRankSum=7.404;DP=456;FS=1.056;HRun=2;HaplotypeScore=85.0579;InbreedingCoeff=0.7828;MQ=57.93;MQ0=26;MQRankSum=-3.817;QD=5.39;ReadPosRankSum=2.976;VQSLOD=-0.1495;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:60.17:0,60,934	1/1:5,1:6:7.01:95,7,0	0/1:67,0:15:12.95:13,0,345	0/1:62,2:19:17.51:18,0,322	1/1:12,2:15:24.33:211,24,0	1/1:15,0:15:32.94:187,33,0	1/1:12,0:12:13.26:90,13,0	0/0:14,0:13:36.11:0,36,523	1/1:8,3:11:22.67:199,23,0	0/0:8,0:8:18.06:0,18,308	0/0:11,0:11:33.10:0,33,528	0/0:9,0:9:20.99:0,21,246	1/1:7,1:7:15.23:90,15,0	1/1:8,2:10:17.73:168,18,0	1/1:1,6:8:11.85:119,12,0	1/1:4,3:7:15.75:135,16,0	1/1:16,1:17:11.72:92,12,0	0/0:30,0:30:84.23:0,84,1381	0/0:16,1:17:41.89:0,42,560	0/0:11,0:10:30.10:0,30,421	0/0:2,0:2:6.02:0,6,67	1/1:2,9:11:3.53:157,4,0	0/0:16,0:15:17.75:0,18,185	0/0:16,0:16:33.11:0,33,455	0/0:14,0:14:36.09:0,36,486	0/0:10,0:10:27.08:0,27,400	0/0:19,0:20:47.88:0,48,649	0/0:5,0:5:11.95:0,12,152
chr10	38786771	.	TGTGTGACTGTGTGGCTGTGTGTATGTATGC	T	6187.68	PASS	AB=0.568;AC=19;AF=0.352;AN=54;BaseQRankSum=6.998;DP=1004;FS=56.889;HRun=0;HaplotypeScore=658.8671;InbreedingCoeff=0.9405;MQ=59.37;MQ0=9;MQRankSum=-8.023;QD=22.10;ReadPosRankSum=2.825;VQSLOD=-0.5497;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,105,6623	1/1:11,0:11:5.63:126,6,0	0/0:69,0:43:32.57:0,33,590	0/0:60,0:31:20.81:0,21,384	./.	1/1:19,0:19:9.03:281,9,0	1/1:20,0:20:17.10:260,17,0	0/0:32,0:32:42.13:0,42,1176	1/1:37,0:37:44.61:1169,45,0	0/0:49,0:49:71.40:0,71,3808	0/0:25,0:25:48.16:0,48,3578	0/0:36,0:36:78.19:0,78,4593	1/1:27,0:27:48.10:1504,48,0	1/1:28,0:28:17.72:512,18,0	1/1:53,0:53:59.79:1368,60,0	1/1:40,0:40:35.19:648,35,0	1/1:20,0:20:20.36:320,20,0	0/0:28,0:28:56.20:0,56,3193	0/0:13,0:13:24.08:0,24,1529	0/0:38,0:38:87.15:0,87,4039	0/0:87,0:86:64.25:0,64,10345	0/1:6,19:25:0:0,0,0	0/0:35,0:35:74.83:0,75,4597	0/0:43,0:43:80.57:0,81,5599	0/0:34,0:34:57.15:0,57,3417	0/0:49,0:49:99:0,105,5690	0/0:27,0:27:66.20:0,66,4897	0/0:13,0:13:24.05:0,24,1065
chr10	38786776	.	GAC	G	113.07	PASS	AB=0.806;AC=4;AF=0.071;AN=56;BaseQRankSum=8.330;DP=991;FS=1.750;HRun=0;HaplotypeScore=184.4903;InbreedingCoeff=-0.0753;MQ=58.16;MQ0=9;MQRankSum=-7.888;QD=0.88;ReadPosRankSum=-2.840;VQSLOD=2.2296;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,1:47:99:0,104,2391	0/0:10,0:10:24.08:0,24,443	0/0:63,0:38:99:0,106,1825	0/0:57,0:29:59.92:0,60,1072	0/0:38,0:38:36.12:0,36,708	0/1:13,3:16:0.31:0,0,428	0/0:20,0:20:35.46:0,35,752	0/0:36,0:36:99:0,105,2022	0/1:26,9:35:76.85:77,0,1131	0/0:51,0:51:99:0,153,3007	0/0:24,0:24:72.25:0,72,1425	0/0:38,0:38:99:0,111,2179	0/1:18,8:26:99:117,0,876	0/0:25,3:28:1.84:0,2,870	0/1:40,11:51:17.35:17,0,1858	0/0:29,9:38:71.79:0,72,1450	0/0:18,1:19:43.94:0,44,867	0/0:24,3:27:23.83:0,24,1205	0/0:14,0:14:42.09:0,42,784	0/0:39,0:39:99:0,114,2209	0/0:83,0:82:99:0,216,4348	0/0:25,0:25:17.91:0,18,317	0/0:34,0:34:96.33:0,96,1913	0/0:43,0:44:99:0,112,2307	0/0:31,0:31:90.31:0,90,1754	0/0:54,0:54:99:0,157,3081	0/0:27,0:27:78:0,78,1520	0/0:15,0:15:39.11:0,39,754
chr10	38786786	.	CTG	C	138.58	PASS	AB=0.807;AC=4;AF=0.071;AN=56;BaseQRankSum=7.959;DP=971;FS=0.789;HRun=0;HaplotypeScore=190.2627;InbreedingCoeff=-0.0971;MQ=57.19;MQ0=4;MQRankSum=-6.567;QD=1.03;ReadPosRankSum=-1.941;VQSLOD=2.3112;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,144,2536	0/0:6,0:6:11.55:0,12,203	0/0:53,0:38:99:0,100,1594	0/0:50,1:32:64.97:0,65,1034	0/0:35,0:35:6.02:0,6,106	0/0:11,4:15:1.47:0,1,213	0/0:15,1:16:11.38:0,11,260	0/0:35,0:35:93.29:0,93,1538	0/1:25,10:35:85.18:85,0,699	0/0:57,0:57:99:0,141,2349	0/0:23,0:23:63.20:0,63,1080	0/0:40,0:40:99:0,111,1894	0/1:17,8:25:99:109,0,618	0/1:21,4:25:28.18:28,0,280	0/1:39,10:49:24.81:25,0,1076	0/0:26,10:36:30.17:0,30,870	0/0:15,1:16:24.89:0,25,360	0/0:31,0:31:69.76:0,70,1169	0/0:16,0:16:39.13:0,39,692	0/0:39,0:39:99:0,108,1846	0/0:83,0:82:99:0,198,3622	0/0:22,0:22:5.88:0,6,106	0/0:35,0:35:93.32:0,93,1630	0/0:39,0:39:99:0,99,1736	0/0:31,0:31:84.29:0,84,1479	0/0:55,0:55:99:0,154,2674	0/0:35,0:34:99:0,99,1741	0/0:15,0:15:45.09:0,45,754
chr10	38786796	.	GTA	G	361.88	PASS	AB=0.723;AC=6;AF=0.107;AN=56;BaseQRankSum=8.734;DP=943;FS=0.000;HRun=0;HaplotypeScore=191.4698;InbreedingCoeff=-0.1468;MQ=57.29;MQ0=1;MQRankSum=-5.479;QD=2.28;ReadPosRankSum=1.320;VQSLOD=2.4901;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,157,2957	0/0:4,2:6:5.53:0,6,107	0/0:55,0:46:99:0,119,2044	0/0:40,0:31:74.64:0,75,1290	0/0:29,0:29:6:0,6,72	0/1:7,6:13:54.37:54,0,142	0/0:11,6:17:11.35:0,11,206	0/0:31,0:31:87.29:0,87,1630	0/1:19,14:33:99:121,0,566	0/0:50,0:50:99:0,140,2583	0/0:22,0:22:63.22:0,63,1187	0/0:39,0:39:99:0,114,2190	0/1:14,13:27:99:140,0,480	0/1:14,6:20:89.29:89,0,187	0/1:28,24:52:45.12:45,0,929	0/0:20,15:35:3.10:0,3,731	0/1:11,3:14:35.42:35,0,209	0/0:26,1:27:18.98:0,19,1076	0/0:19,0:19:57.14:0,57,985	0/0:38,0:38:99:0,111,2122	0/0:85,1:85:99:0,229,4391	0/0:21,0:21:2.86:0,3,43	0/0:37,0:37:99:0,102,1890	0/0:40,0:40:99:0,117,2175	0/0:30,0:30:78.27:0,78,1505	0/0:57,0:57:99:0,169,3160	0/0:35,0:34:99:0,102,1968	0/0:14,0:14:42.12:0,42,741
chr10	38786800	.	GCGTGTGAC	G	2552.62	PASS	AB=0.844;AC=11;AF=0.204;AN=54;BaseQRankSum=9.893;DP=933;FS=65.483;HRun=0;HaplotypeScore=279.6187;InbreedingCoeff=0.0224;MQ=58.18;MQ0=0;MQRankSum=-6.458;QD=10.82;ReadPosRankSum=-4.519;VQSLOD=-0.2563;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,156,6164	1/1:5,0:5:5.74:82,6,0	0/0:51,0:45:99:0,119,3353	0/0:36,0:31:81.07:0,81,2240	./.	0/1:8,5:13:99:120,0,128	0/1:19,1:20:99:208,0,112	0/0:30,0:30:87.28:0,87,2776	0/1:29,6:35:99:314,0,185	0/0:48,0:48:99:0,144,5273	0/0:23,0:23:69.24:0,69,2719	0/0:39,0:39:99:0,114,4248	0/1:24,4:28:41.72:491,0,42	0/1:8,13:21:99:125,0,129	0/1:45,5:50:11.31:660,0,11	0/1:28,5:33:75.23:461,0,75	0/1:9,3:12:35.85:234,0,36	0/0:25,0:25:16.03:0,16,2143	0/0:24,0:24:72.24:0,72,2475	0/0:39,0:39:99:0,114,3851	0/0:85,0:85:99:0,197,9017	0/1:19,0:19:0:0,0,0	0/0:37,0:37:99:0,105,3968	0/0:42,0:42:99:0,123,4979	0/0:30,0:30:84.22:0,84,3016	0/0:60,0:60:99:0,174,6271	0/0:36,0:35:99:0,104,4337	0/0:11,0:11:33.08:0,33,1064
chr10	38787116	.	A	ATG	13361.78	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=21.825;DP=1437;FS=8.865;HRun=0;HaplotypeScore=312.7310;InbreedingCoeff=0.9805;MQ=56.57;MQ0=32;MQRankSum=0.352;QD=30.86;ReadPosRankSum=6.353;VQSLOD=3.7023;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:61,0:62:99:0,125,1573	1/1:5,6:11:18:271,18,0	0/0:87,0:18:7.26:0,7,96	0/0:89,0:20:19.44:0,19,196	1/1:6,25:32:44.52:747,45,0	0/0:30,0:30:71.91:0,72,908	0/0:41,0:41:96.30:0,96,1210	0/0:41,0:42:99:0,105,1301	1/1:11,51:67:99:2045,123,0	0/0:72,0:72:99:0,178,2177	0/0:32,0:32:81.20:0,81,978	0/0:77,0:77:99:0,196,2434	1/1:12,46:58:99:1988,120,0	1/1:18,43:62:99:2064,108,0	1/1:20,48:68:99:2120,129,0	1/1:17,57:75:99:2326,110,0	1/1:5,19:25:16.62:854,17,0	0/0:31,0:31:75.24:0,75,943	0/0:32,0:29:72.02:0,72,867	0/0:45,0:45:99:0,102,1274	0/0:135,0:133:99:0,317,3902	1/1:5,29:34:56.99:947,57,0	0/0:40,0:40:84.16:0,84,1060	0/0:61,0:61:99:0,132,1651	0/0:31,0:32:63.16:0,63,765	0/0:54,0:54:99:0,129,1621	0/0:29,0:29:69.20:0,69,856	0/0:8,0:8:14.63:0,15,221
chr10	38787234	.	CTG	C	10093.55	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-0.490;DP=1437;FS=0.000;HRun=0;HaplotypeScore=249.9333;InbreedingCoeff=0.9756;MQ=60.27;MQ0=19;MQRankSum=0.445;QD=27.81;ReadPosRankSum=0.025;VQSLOD=4.5436;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,114,1908	0/0:21,1:22:22.01:0,22,908	0/0:86,0:41:75.27:0,75,1276	0/0:76,0:27:4.29:0,4,650	0/0:48,0:48:99:0,117,1917	0/0:27,1:28:25.02:0,25,958	0/0:36,1:37:49.08:0,49,1334	1/1:11,32:44:99:1210,100,0	0/0:64,1:65:99:0,124,2586	0/0:89,4:93:90.97:0,91,3632	0/0:25,2:27:37.06:0,37,1157	0/0:72,2:73:99:0,167,3217	0/0:54,0:54:99:0,141,2336	0/0:54,0:54:99:0,141,2316	0/0:67,1:68:95.27:0,95,2653	0/0:75,2:77:99:0,172,3399	0/0:42,0:42:84.91:0,85,1414	0/0:26,0:26:61.50:0,62,1056	1/1:2,26:27:74.53:930,75,0	1/1:3,32:34:32.17:909,32,0	1/1:35,81:109:99:3267,261,0	0/0:54,0:54:99:0,138,2273	0/0:38,0:38:93.32:0,93,1545	0/0:55,1:55:99:0,106,2317	1/1:3,33:36:81.26:1031,81,0	1/1:10,44:54:34.96:1525,35,0	1/1:5,21:24:54.11:687,54,0	1/1:0,21:21:42.13:535,42,0
chr10	38787486	.	T	TTG	19143.14	PASS	AC=28;AF=0.667;AN=42;BaseQRankSum=-15.315;DP=962;FS=2.202;HRun=0;HaplotypeScore=124.6434;InbreedingCoeff=0.9287;MQ=56.08;MQ0=41;MQRankSum=2.279;QD=34.87;ReadPosRankSum=3.242;VQSLOD=7.2158;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:62,0:62:99:0,128,1796	./.	0/0:63,0:18:48.10:0,48,511	0/0:96,0:29:55.67:0,56,625	./.	1/1:3,24:28:49.25:865,49,0	1/1:8,35:42:78.27:1327,78,0	1/1:11,33:45:99:1641,108,0	./.	0/0:77,0:77:99:0,190,2444	0/0:36,0:36:99:0,99,1246	1/1:5,49:54:99:2194,129,0	./.	./.	0/0:11,0:10:3.01:0,3,39	./.	1/1:3,0:3:0.47:1,0,0	0/0:36,0:36:50.62:0,51,1054	1/1:12,10:18:42.10:646,42,0	1/1:3,28:32:78.27:1315,78,0	1/1:39,90:121:99:4515,269,0	./.	1/1:3,25:27:66.23:1121,66,0	1/1:18,32:46:99:1674,99,0	1/1:4,15:18:33.11:561,33,0	1/1:7,40:48:99:1953,117,0	1/1:2,22:24:60.20:1016,60,0	1/1:7,9:13:16.25:313,16,0
chr10	38788337	.	T	TA	3848.40	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=8.701;DP=505;FS=6.610;HRun=9;HaplotypeScore=85.9730;InbreedingCoeff=0.9424;MQ=58.21;MQ0=6;MQRankSum=-7.166;QD=24.83;ReadPosRankSum=-0.997;VQSLOD=3.7598;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:33:92.98:0,93,807	1/1:1,6:7:18.05:199,18,0	0/0:24,0:12:16.12:0,16,193	0/0:18,0:8:8.79:0,9,78	1/1:9,17:26:54.03:563,54,0	0/0:28,0:28:80.97:0,81,699	0/0:11,0:11:26.99:0,27,234	0/0:32,0:32:74.95:0,75,647	1/1:3,14:17:45.11:489,45,0	0/0:27,0:27:74.96:0,75,646	0/0:22,0:22:62.97:0,63,543	1/1:0,12:12:30.08:332,30,0	1/1:3,7:10:1.04:233,1,0	1/1:4,12:16:36.10:398,36,0	1/1:1,6:7:18.05:199,18,0	1/1:4,14:18:42.09:453,42,0	1/1:4,11:15:27.07:298,27,0	0/0:35,0:32:86.81:0,87,743	0/0:24,0:23:56.77:0,57,491	0/0:18,0:18:50.99:0,51,443	0/0:9,0:9:20.97:0,21,182	1/1:1,5:6:15.04:166,15,0	1/1:1,10:11:30.08:332,30,0	1/1:3,7:10:8.57:187,9,0	0/0:20,0:20:53.99:0,54,469	0/0:17,0:17:44.97:0,45,388	0/0:23,0:23:53.97:0,54,469	0/0:8,0:8:20.98:0,21,182
chr10	38788353	.	TA	T	2457.47	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=9.376;DP=495;FS=13.454;HRun=9;HaplotypeScore=91.5786;InbreedingCoeff=0.9698;MQ=62.40;MQ0=0;MQRankSum=-9.972;QD=19.50;ReadPosRankSum=-1.915;VQSLOD=2.2802;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:39:99:0,108,1223	1/1:0,7:7:21.01:192,21,0	0/0:13,1:12:8.64:0,9,303	0/0:9,0:8:12.46:0,12,122	1/1:3,23:26:59.99:538,60,0	0/0:25,0:25:69.18:0,69,776	0/0:9,0:9:21.06:0,21,242	0/0:30,0:30:15.65:0,16,244	1/1:3,17:20:48.02:439,48,0	0/0:31,0:31:75.21:0,75,851	0/0:21,1:22:23.68:0,24,519	0/0:11,0:11:18.05:0,18,208	1/1:2,9:11:24:219,24,0	1/1:2,11:13:34.83:307,35,0	1/1:1,7:8:18.01:164,18,0	1/1:2,16:18:48.02:438,48,0	1/1:5,9:14:20.95:184,21,0	0/0:36,0:33:87.19:0,87,969	0/0:24,0:24:30.27:0,30,249	0/0:16,0:16:40.57:0,41,223	0/0:8,0:8:20.29:0,20,116	1/1:0,8:9:23:190,23,0	0/0:11,0:11:30.09:0,30,346	0/0:11,0:11:30.08:0,30,337	0/0:19,0:19:54.61:0,55,286	0/0:18,0:18:10.03:0,10,153	0/0:23,0:23:56.34:0,56,333	0/0:12,0:12:34.66:0,35,187
chr10	38788965	.	CTTT	C	3513.09	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=10.928;DP=548;FS=3.261;HRun=11;HaplotypeScore=111.4097;InbreedingCoeff=0.9880;MQ=63.99;MQ0=5;MQRankSum=0.759;QD=22.09;ReadPosRankSum=4.710;VQSLOD=2.3626;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:84.27:0,84,1608	1/1:2,11:13:27.08:354,27,0	0/0:13,0:10:20.88:0,21,248	0/0:13,0:7:12.04:0,12,166	1/1:4,15:19:36.07:473,36,0	0/0:3,0:15:28.14:0,28,210	0/0:4,0:23:53.74:0,54,446	0/0:38,0:38:87.70:0,88,1070	1/1:0,12:12:27.09:355,27,0	0/0:22,0:22:48.15:0,48,935	0/0:14,0:16:45.06:0,45,758	0/0:1,0:17:43.11:0,43,341	1/1:3,11:14:24.05:312,24,0	1/1:4,6:9:12.03:157,12,0	1/1:4,12:16:25.97:353,26,0	1/1:3,13:16:24.06:315,24,0	1/1:8,25:33:47.97:609,48,0	0/0:26,0:26:56.93:0,57,1027	0/0:20,0:18:26.46:0,26,490	0/0:31,0:31:87.28:0,87,1156	0/0:17,0:17:42.14:0,42,568	1/1:4,22:25:47.92:586,48,0	0/0:5,0:27:48.67:0,49,402	0/0:0,0:12:26.81:0,27,200	0/0:15,0:15:45.15:0,45,601	0/0:19,0:19:51.15:0,51,642	0/0:20,0:20:51.10:0,51,655	0/0:14,0:14:36.04:0,36,429
chr10	38789422	.	TA	T	564.44	PASS	AC=16;AF=0.381;AN=42;BaseQRankSum=2.633;DP=99;FS=1.621;HRun=1;HaplotypeScore=18.6418;InbreedingCoeff=0.5451;MQ=55.41;MQ0=10;MQRankSum=0.309;QD=18.21;ReadPosRankSum=0.373;VQSLOD=3.7002;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:2,0:1:3.01:0,3,38	1/1:0,1:1:3:27,3,0	./.	0/0:20,0:4:1.75:0,2,15	./.	0/0:1,0:1:3.01:0,3,48	./.	0/0:6,0:6:15.05:0,15,204	1/1:0,2:2:3.01:40,3,0	0/0:3,0:3:9.02:0,9,112	0/0:1,0:1:3.01:0,3,38	0/0:1,0:1:3:0,3,25	1/1:0,1:1:3.01:40,3,0	1/1:0,4:4:6.01:67,6,0	1/1:0,3:3:9.02:107,9,0	1/1:0,4:3:9.01:104,9,0	1/1:1,12:12:20.95:218,21,0	0/0:10,0:8:9.03:0,9,127	0/0:4,0:4:6.49:0,6,84	0/0:3,0:3:9.03:0,9,124	0/0:2,0:2:5.98:0,6,49	1/1:0,3:3:9.01:104,9,0	0/0:1,0:1:1.25:0,1,3	./.	./.	./.	0/0:1,0:1:3.01:0,3,38	./.
chr10	38789426	.	TATATTATATATATATATA	T	649.83	PASS	AB=1.000;AC=24;AF=0.706;AN=34;BaseQRankSum=0.742;DP=92;FS=4.246;HRun=0;HaplotypeScore=39.9276;InbreedingCoeff=0.2702;MQ=53.65;MQ0=10;MQRankSum=-0.549;QD=13.00;ReadPosRankSum=0.420;VQSLOD=0.9525;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	1/1:0,1:1:3.01:138,3,0	1/1:8,0:1:2.60:10,3,0	0/0:23,0:5:5.06:0,5,22	./.	0/0:1,0:1:3.01:0,3,40	./.	0/1:6,0:6:57.59:58,0,59	./.	0/1:2,0:2:0:0,0,0	./.	./.	./.	1/1:3,1:4:3.01:138,3,0	1/1:1,1:2:3.01:138,3,0	1/1:4,0:3:1.82:5,2,0	1/1:10,1:10:6.02:140,6,0	0/0:9,0:7:6.02:0,6,396	1/1:4,0:4:2.58:16,3,0	./.	1/1:1,0:1:2.04:6,2,0	1/1:3,0:3:1.82:5,2,0	0/0:1,0:1:1.55:0,2,4	./.	./.	./.	1/1:1,0:1:3.01:38,3,0	1/1:3,0:2:6.01:63,6,0
chr10	38789430	.	T	TG	96.12	PASS	AB=0.917;AC=13;AF=0.464;AN=28;BaseQRankSum=-1.528;DP=76;FS=18.921;HRun=0;HaplotypeScore=27.9884;InbreedingCoeff=0.2500;MQ=66.70;MQ0=9;MQRankSum=0.702;QD=4.00;ReadPosRankSum=-0.206;VQSLOD=1.3658;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	0/1:1,0:1:0:0,0,0	./.	0/0:27,0:7:6.37:0,6,39	./.	0/0:1,0:1:3.01:0,3,41	./.	0/1:4,0:4:12.76:13,0,18	./.	./.	./.	./.	./.	0/1:2,1:3:3.26:17,0,3	0/0:1,0:1:0.47:0,0,1	1/1:1,0:1:3:27,3,0	1/1:2,8:10:5.40:81,5,0	0/0:1,0:7:5.88:0,6,36	1/1:3,0:3:2.50:17,2,0	./.	./.	1/1:1,0:1:3:27,3,0	0/0:1,0:1:2.96:0,3,19	./.	./.	./.	1/1:1,0:1:2.84:14,3,0	0/0:3,0:2:2.90:0,3,18
chr10	38789443	.	TA	T	398.25	PASS	AB=1.000;AC=19;AF=0.731;AN=26;BaseQRankSum=1.308;DP=72;FS=7.048;HRun=2;HaplotypeScore=31.3830;InbreedingCoeff=0.1047;MQ=53.31;MQ0=7;MQRankSum=-0.456;QD=6.42;ReadPosRankSum=-0.882;VQSLOD=0.1070;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	1/1:1,0:1:2.97:20,3,0	0/0:6,0:3:2.85:0,3,36	0/1:23,0:5:5.96:6,0,26	1/1:2,0:2:2.88:15,3,0	./.	./.	1/1:3,4:7:12.61:101,13,0	1/1:1,0:1:3.01:38,3,0	./.	./.	./.	./.	1/1:3,0:3:5.98:58,6,0	1/1:2,0:2:5.97:49,6,0	1/1:1,0:1:3.01:37,3,0	0/1:9,0:9:12.70:69,0,13	0/1:10,0:8:2.09:31,0,2	0/0:3,0:3:3.40:0,3,18	./.	./.	./.	./.	./.	./.	./.	./.	1/1:1,2:2:6.02:72,6,0
chr10	38789449	.	A	ATG	209.82	PASS	AB=0.800;AC=13;AF=0.433;AN=30;BaseQRankSum=0.608;DP=73;FS=41.597;HRun=0;HaplotypeScore=31.4959;InbreedingCoeff=0.4023;MQ=69.75;MQ0=5;MQRankSum=-1.197;QD=13.99;ReadPosRankSum=-0.018;VQSLOD=1.4969;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:2,0:1:2.74:0,3,12	1/1:1,0:1:2.50:9,2,0	0/0:4,0:3:3.01:0,3,36	0/0:24,0:7:5.44:0,5,38	1/1:0,1:1:3.01:57,3,0	./.	./.	0/0:10,0:12:24.46:0,24,160	1/1:1,1:2:6:58,6,0	./.	./.	./.	./.	1/1:2,1:3:2.69:35,3,0	1/1:1,1:2:5.51:59,6,0	1/1:2,0:2:5.98:46,6,0	0/1:3,1:4:4.87:57,0,5	0/0:9,0:7:3.59:0,4,85	0/0:3,0:3:1.82:0,2,5	./.	./.	./.	./.	0/0:0,0:1:2.84:0,3,14	./.	./.	./.	0/0:1,0:2:5.90:0,6,36
chr10	38789451	.	AT	A	368.50	PASS	AC=8;AF=0.267;AN=30;BaseQRankSum=-1.565;DP=72;FS=20.808;HRun=1;HaplotypeScore=29.6768;InbreedingCoeff=0.4141;MQ=69.75;MQ0=5;MQRankSum=0.106;QD=18.42;ReadPosRankSum=-0.805;VQSLOD=2.0114;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:2,0:1:3:0,3,27	1/1:1,0:1:0.89:2,1,0	0/0:4,0:3:3.01:0,3,47	0/0:24,0:7:8.23:0,8,70	0/0:1,0:1:3.01:0,3,35	./.	./.	1/1:3,10:13:32.44:351,32,0	0/0:2,0:2:6.02:0,6,78	./.	./.	./.	./.	0/0:3,0:3:2:0,2,38	0/0:2,0:2:2:0,2,31	0/0:2,0:2:6.02:0,6,72	0/0:4,0:4:4.86:0,5,105	0/0:7,0:5:9.03:0,9,125	1/1:2,1:3:2.77:39,3,0	./.	./.	./.	./.	0/0:1,0:1:2.04:0,2,6	./.	./.	./.	1/1:3,0:2:6.02:80,6,0
chr10	38789521	.	ATG	A	1070.72	PASS	AC=14;AF=0.269;AN=52;BaseQRankSum=5.154;DP=131;FS=12.369;HRun=0;HaplotypeScore=20.8797;InbreedingCoeff=0.6838;MQ=84.85;MQ0=2;MQRankSum=0.986;QD=32.45;ReadPosRankSum=1.466;VQSLOD=4.2671;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:6:18.06:0,18,347	./.	0/0:4,0:3:1.25:0,1,3	0/0:13,1:10:11.05:0,11,109	1/1:0,3:3:6.02:90,6,0	0/0:4,0:4:12.04:0,12,232	0/0:2,0:2:6.02:0,6,109	0/0:17,0:17:51.16:0,51,912	1/1:0,6:6:15.05:229,15,0	0/0:3,0:3:9.02:0,9,143	0/0:3,0:3:9.03:0,9,173	0/0:1,0:1:3.01:0,3,58	1/1:0,1:1:3.01:46,3,0	1/1:0,4:4:9.03:137,9,0	1/1:0,2:2:6.02:92,6,0	1/1:0,5:5:12.04:184,12,0	1/1:0,12:12:30.10:458,30,0	0/0:18,0:17:48.12:0,48,887	0/0:3,0:3:9.03:0,9,169	0/0:1,0:1:3.01:0,3,58	0/0:3,0:3:9.03:0,9,174	./.	0/0:4,0:4:12.04:0,12,231	0/0:2,0:2:6.02:0,6,116	0/0:1,0:1:3.01:0,3,58	0/0:5,0:5:15.05:0,15,280	0/0:3,0:3:9.03:0,9,174	0/0:4,0:4:12.04:0,12,231
chr10	38789729	.	A	AT	3534.20	PASS	AB=0.958;AC=32;AF=0.593;AN=54;BaseQRankSum=-1.939;DP=353;FS=14.638;HRun=10;HaplotypeScore=62.3115;InbreedingCoeff=0.8237;MQ=67.78;MQ0=0;MQRankSum=-0.868;QD=17.67;ReadPosRankSum=-2.021;VQSLOD=2.3846;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,1:38:44.72:0,45,713	1/1:2,0:2:5.75:31,6,0	0/0:9,0:8:0.34:0,0,1	0/1:10,0:7:4.73:5,0,35	1/1:7,0:7:17.25:92,17,0	0/0:22,0:22:22.73:0,23,57	0/0:12,0:12:11.20:0,11,28	1/1:10,23:33:38.51:615,39,0	0/1:11,0:11:1.18:88,0,1	0/0:12,0:12:32.96:0,33,271	0/0:7,0:8:23.88:0,24,188	0/0:2,0:16:27.44:0,27,95	1/1:6,0:6:14.38:77,14,0	1/1:8,0:8:17.25:92,17,0	1/1:5,0:5:11.55:63,12,0	1/1:8,0:8:17.25:92,17,0	1/1:22,0:21:46:245,46,0	0/0:18,0:18:50.94:0,51,419	1/1:5,15:19:42.10:442,42,0	1/1:2,7:9:21.02:212,21,0	1/1:0,9:9:18.05:192,18,0	./.	0/0:0,0:5:8.15:0,8,24	0/0:1,0:13:22.41:0,22,65	1/1:0,10:10:27.07:288,27,0	1/1:2,9:11:27.07:287,27,0	1/1:1,14:15:36.04:371,36,0	1/1:3,10:13:33.07:344,33,0
chr10	38789739	.	T	TTA	2784.44	PASS	AB=1.000;AC=20;AF=0.357;AN=56;BaseQRankSum=8.951;DP=384;FS=0.000;HRun=0;HaplotypeScore=85.9643;InbreedingCoeff=0.7774;MQ=59.90;MQ0=1;MQRankSum=-1.400;QD=22.82;ReadPosRankSum=-1.419;VQSLOD=3.7295;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:39:73.25:0,73,1348	1/1:0,5:5:8.95:126,9,0	0/1:5,0:4:4.51:5,0,11	0/0:7,0:4:5.02:0,5,52	1/1:0,14:14:32.70:412,33,0	0/0:0,0:21:46.90:0,47,186	0/0:1,0:13:26.05:0,26,111	0/0:27,0:27:48.18:0,48,256	1/1:2,13:17:18.21:372,18,0	0/0:12,0:12:36.11:0,36,487	0/0:8,0:8:23.97:0,24,309	0/0:17,0:17:32.53:0,33,328	1/1:1,6:7:18.03:295,18,0	1/1:1,10:11:11.15:319,11,0	1/1:1,8:9:12.04:217,12,0	1/1:1,10:11:18.06:328,18,0	1/1:3,18:19:50.54:882,51,0	0/0:22,0:22:56.49:0,56,768	0/1:20,0:17:3.46:3,0,77	0/0:12,0:12:1.56:0,2,84	0/0:12,0:12:9.23:0,9,68	1/1:1,0:1:3:25,3,0	0/0:6,0:6:14.95:0,15,117	0/0:14,0:14:36.34:0,36,276	0/0:13,0:13:25.36:0,25,125	0/0:11,0:10:17.24:0,17,66	0/0:16,0:16:24.83:0,25,94	0/0:11,0:11:18.12:0,18,49
chr10	38791659	.	T	TA	2024.79	PASS	AB=0.775;AC=15;AF=0.300;AN=50;BaseQRankSum=-4.384;DP=365;FS=21.841;HRun=12;HaplotypeScore=56.8148;InbreedingCoeff=0.4279;MQ=55.21;MQ0=13;MQRankSum=1.746;QD=10.89;ReadPosRankSum=-3.402;VQSLOD=0.3481;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:58.36:0,58,406	0/0:3,0:3:2.03:0,2,6	0/1:15,1:4:2.10:2,0,15	0/0:16,0:7:3.80:0,4,38	0/0:5,0:3:2.03:0,2,6	0/0:22,0:24:30.38:0,30,181	0/0:9,0:8:11.90:0,12,87	0/1:8,18:22:1.69:436,0,2	0/0:0,0:2:4.07:0,4,12	0/0:23,0:20:37.73:0,38,265	0/0:14,0:16:22.18:0,22,141	0/0:4,0:8:12.22:0,12,35	0/0:0,0:2:4.07:0,4,12	./.	./.	0/0:1,0:2:2.03:0,2,6	0/0:4,0:10:8.14:0,8,24	0/1:12,1:14:10.47:10,0,80	1/1:9,6:17:5.82:242,6,0	1/1:6,3:8:11.96:106,12,0	1/1:1,2:4:2.08:52,2,0	./.	0/0:3,0:7:12.56:0,13,39	0/0:2,0:3:2.03:0,2,6	1/1:9,14:21:45.01:420,45,0	0/1:14,11:27:3.77:340,0,4	0/1:7,6:17:4.30:170,0,4	1/1:9,13:23:18.41:397,18,0
chr10	38791685	.	T	TA	1971.45	PASS	AB=0.816;AC=25;AF=0.658;AN=38;BaseQRankSum=-0.020;DP=315;FS=13.645;HRun=13;HaplotypeScore=74.6032;InbreedingCoeff=0.4090;MQ=74.57;MQ0=5;MQRankSum=-3.440;QD=9.00;ReadPosRankSum=-1.603;VQSLOD=0.8440;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:33:47.22:0,47,323	./.	0/0:31,0:14:14.73:0,15,79	0/1:18,0:8:9.27:9,0,15	./.	1/1:1,21:23:36.04:333,36,0	1/1:3,7:10:9.38:84,9,0	1/1:21,3:24:11.47:207,11,0	./.	0/0:18,0:18:32.62:0,33,226	0/0:11,0:11:11.05:0,11,96	0/1:5,2:7:11.58:43,0,12	./.	./.	./.	./.	./.	0/1:9,3:12:16.01:16,0,50	1/1:10,4:13:9.01:84,9,0	0/1:4,5:9:3.05:94,0,3	0/1:5,1:6:8.61:58,0,9	./.	1/1:3,1:5:7.70:47,8,0	1/1:2,0:3:5.92:42,6,0	1/1:13,10:23:31.58:276,32,0	1/1:20,7:27:35:276,35,0	1/1:11,4:15:18.88:161,19,0	1/1:14,8:23:48.36:390,48,0
chr10	38791732	.	C	CGTGTGTGTGTGTGTGTGTGTGTGTGT	8807.02	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=5.664;DP=405;FS=0.000;HRun=0;HaplotypeScore=307.5453;InbreedingCoeff=0.3261;MQ=59.10;MQ0=1;MQRankSum=-6.711;QD=43.82;ReadPosRankSum=-0.423;VQSLOD=2.9503;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:61.69:0,62,3984	1/1:0,1:3:3.01:358,3,0	0/0:27,0:20:32.02:0,32,1253	0/0:16,0:15:31.19:0,31,716	1/1:5,0:5:0.47:1,0,0	0/0:20,0:20:32.75:0,33,1764	0/0:13,0:13:26.01:0,26,1385	0/1:21,0:21:99:370,0,227	1/1:16,0:16:5.55:718,6,0	0/0:22,0:22:60.16:0,60,3382	0/0:6,0:6:12.01:0,12,281	0/0:15,0:15:39.12:0,39,2541	1/1:15,0:14:34.72:2702,35,0	1/1:6,0:6:12.51:510,13,0	1/1:2,1:9:0.13:354,0,0	1/1:20,0:20:27.73:943,28,0	1/1:16,0:16:35.73:2565,36,0	0/1:16,0:16:19.10:19,0,1842	0/1:20,0:19:43.23:43,0,575	0/1:11,0:11:31.51:88,0,32	0/1:15,0:15:8.86:9,0,484	0/0:14,0:14:2.93:0,3,12	0/0:4,0:4:6.02:0,6,325	0/0:15,0:15:45.07:0,45,2184	0/1:11,0:11:34.53:35,0,410	0/1:17,0:17:92.05:92,0,743	0/0:7,0:7:13.19:0,13,555	0/0:12,0:12:29.98:0,30,537
chr10	38791735	.	A	ATGTGTG	5273.10	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=-0.015;DP=420;FS=6.770;HRun=0;HaplotypeScore=125.9191;InbreedingCoeff=0.8180;MQ=60.36;MQ0=1;MQRankSum=-7.396;QD=25.35;ReadPosRankSum=-0.751;VQSLOD=4.1533;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:25.90:0,26,1353	1/1:2,0:2:3.01:79,3,0	0/0:29,0:23:19.63:0,20,643	0/0:17,0:16:23.90:0,24,427	1/1:5,0:5:2.98:22,3,0	0/0:21,0:21:33.08:0,33,630	0/0:13,0:13:23.74:0,24,516	1/1:17,2:20:16.92:558,17,0	1/1:16,0:16:2.94:78,3,0	0/0:23,0:24:63.20:0,63,1230	0/0:7,0:7:12.03:0,12,205	0/0:14,0:15:45.13:0,45,852	1/1:16,0:15:12.02:251,12,0	1/1:6,0:6:9.03:151,9,0	1/1:6,0:6:3.01:74,3,0	1/1:20,0:20:9.01:156,9,0	1/1:16,0:16:18.50:327,18,0	0/0:16,0:16:36.08:0,36,727	1/1:12,8:20:24.08:738,24,0	1/1:9,2:11:12.04:247,12,0	1/1:6,6:18:8.76:135,9,0	0/0:14,0:14:0:0,0,0	0/0:4,0:4:6.02:0,6,129	0/0:15,0:15:45.15:0,45,928	1/1:5,4:11:18.06:529,18,0	1/1:13,3:17:39.12:971,39,0	1/1:2,4:9:15.05:377,15,0	1/1:6,7:14:18.06:581,18,0
chr10	38792056	.	G	GTT	2379.68	PASS	AB=0.721;AC=12;AF=0.214;AN=56;BaseQRankSum=10.700;DP=604;FS=5.103;HRun=1;HaplotypeScore=136.3994;InbreedingCoeff=0.3354;MQ=61.45;MQ0=9;MQRankSum=0.051;QD=15.66;ReadPosRankSum=2.642;VQSLOD=1.2023;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,117,1849	1/1:3,2:5:13.26:107,13,0	0/0:36,0:24:72.17:0,72,1049	0/0:37,0:21:54.90:0,55,749	1/1:9,0:9:10.66:47,11,0	0/0:18,0:18:54.09:0,54,800	0/0:23,0:23:57.09:0,57,927	0/0:25,0:25:63.21:0,63,1022	0/1:16,6:22:32.12:306,0,32	0/0:33,0:32:96.24:0,96,1419	0/0:18,0:17:33.08:0,33,489	0/0:26,0:26:60.20:0,60,974	0/1:6,5:11:39.83:254,0,40	0/1:16,10:26:51.01:403,0,51	1/1:10,11:21:15.86:495,16,0	0/1:6,6:11:85.27:235,0,85	0/1:15,13:28:24.48:553,0,24	0/0:24,0:24:63.20:0,63,1001	0/0:27,0:27:72.07:0,72,1047	0/0:10,0:10:24.08:0,24,364	0/0:37,0:35:53.65:0,54,976	0/1:13,5:18:25.92:145,0,26	0/0:11,0:11:10.08:0,10,275	0/0:29,0:29:55.11:0,55,932	0/0:7,0:7:18.02:0,18,263	0/0:27,0:27:77.62:0,78,1067	0/0:13,0:13:30.10:0,30,487	0/0:10,0:10:30.09:0,30,458
chr10	38792057	.	G	GT	618.47	PASS	AB=0.710;AC=8;AF=0.143;AN=56;BaseQRankSum=7.980;DP=599;FS=0.550;HRun=1;HaplotypeScore=128.5307;InbreedingCoeff=-0.1260;MQ=59.17;MQ0=12;MQRankSum=-0.581;QD=4.36;ReadPosRankSum=8.547;VQSLOD=-0.1658;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,117,1442	0/1:3,2:5:6.85:29,0,7	0/0:35,0:22:63.09:0,63,783	0/0:36,0:19:21.50:0,22,487	0/0:9,0:9:10.01:0,10,38	0/0:18,0:18:48.05:0,48,599	0/0:23,0:23:60.15:0,60,759	0/0:26,0:26:66.11:0,66,825	0/1:17,6:23:55.62:56,0,139	0/0:30,0:29:84.22:0,84,1037	0/0:16,0:15:27.09:0,27,350	0/0:26,0:26:63.13:0,63,780	0/1:6,5:11:73.46:80,0,73	0/1:14,10:24:29.98:30,0,169	0/1:10,11:21:38.60:222,0,39	0/1:5,6:10:78.03:107,0,78	0/1:15,13:28:99:215,0,106	0/0:25,0:25:66.17:0,66,824	0/0:28,0:27:67.06:0,67,762	0/0:10,0:10:23.94:0,24,239	0/0:38,0:36:58.35:0,58,770	0/1:14,5:19:16.46:16,0,127	0/0:10,0:10:14.97:0,15,213	0/0:29,0:29:56.44:0,56,711	0/0:7,0:7:15.05:0,15,194	0/0:27,0:27:65.67:0,66,778	0/0:12,0:12:30.10:0,30,384	0/0:10,0:10:27.07:0,27,334
chr10	38792080	.	GGTGTGTGTGTGTGT	G	2260.34	PASS	AB=1.000;AC=13;AF=0.260;AN=50;BaseQRankSum=-0.255;DP=497;FS=1.996;HRun=0;HaplotypeScore=195.4557;InbreedingCoeff=0.7817;MQ=45.52;MQ0=22;MQRankSum=-3.481;QD=17.94;ReadPosRankSum=0.769;VQSLOD=2.6285;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:29:24.08:0,24,1451	0/0:5,0:4:6.02:0,6,296	0/1:14,0:4:0:0,0,0	./.	0/0:6,0:7:5.65:0,6,312	0/0:16,0:18:9.03:0,9,345	0/0:20,0:22:20.63:0,21,605	1/1:17,5:22:15.03:363,15,0	0/0:21,0:23:48.16:0,48,2316	0/0:15,0:18:27.09:0,27,1317	0/0:6,0:7:15.05:0,15,567	0/0:18,0:25:7.36:0,7,388	0/0:11,0:12:15.03:0,15,616	0/0:23,0:23:21.07:0,21,1036	0/0:22,0:22:17.86:0,18,677	0/0:13,0:16:27.09:0,27,1232	0/0:24,0:30:42.14:0,42,1960	0/0:11,0:24:36.12:0,36,1787	1/1:15,9:22:24.08:872,24,0	./.	1/1:22,15:36:2.96:119,3,0	0/0:13,0:15:12.04:0,12,538	0/0:5,0:6:5.79:0,6,176	0/0:32,0:33:20.54:0,21,902	1/1:2,4:6:6.02:238,6,0	1/1:7,6:12:12.04:471,12,0	1/1:6,4:10:9.03:357,9,0	./.
chr10	38794005	.	T	TA	278.62	PASS	AB=0.872;AC=10;AF=0.179;AN=56;BaseQRankSum=1.354;DP=377;FS=4.115;HRun=12;HaplotypeScore=93.5507;InbreedingCoeff=0.1999;MQ=87.48;MQ0=9;MQRankSum=-2.126;QD=2.32;ReadPosRankSum=-0.990;VQSLOD=0.0291;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:38.60:0,39,278	0/0:7,0:7:11.89:0,12,90	0/1:43,1:19:22.20:22,0,82	0/0:43,0:27:17.79:0,18,112	0/0:15,0:15:23.39:0,23,179	0/0:6,0:6:8.92:0,9,65	0/0:10,0:10:11.88:0,12,87	0/0:25,0:25:28.39:0,28,303	0/0:9,0:9:8.90:0,9,66	0/0:5,0:5:11.87:0,12,83	0/1:16,1:17:11.64:12,0,167	1/1:4,5:9:20.98:193,21,0	0/0:8,0:8:8.92:0,9,66	0/0:6,0:6:11.80:0,12,84	0/1:6,2:9:11.52:12,0,82	0/0:12,0:13:16.85:0,17,115	0/0:23,0:25:36.63:0,37,243	0/1:12,1:13:9.60:10,0,95	0/0:22,1:23:12.70:0,13,250	0/0:7,0:7:5.95:0,6,44	0/0:7,0:7:6:0,6,44	0/0:5,0:5:5.89:0,6,41	0/1:2,4:6:7.69:70,0,8	1/1:3,2:6:11.86:102,12,0	0/0:3,0:3:5.94:0,6,44	0/0:12,0:12:20.83:0,21,153	0/1:13,0:13:5.12:5,0,129	0/0:2,0:2:2.96:0,3,22
chr10	38794022	.	GTT	G	1053.21	PASS	AB=0.615;AC=17;AF=0.304;AN=56;BaseQRankSum=-1.822;DP=391;FS=8.440;HRun=13;HaplotypeScore=72.7341;InbreedingCoeff=0.7791;MQ=77.06;MQ0=14;MQRankSum=-0.600;QD=10.13;ReadPosRankSum=0.405;VQSLOD=1.6877;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:24:50.05:0,50,585	0/0:1,0:5:14.94:0,15,134	0/0:63,1:18:6.56:0,7,181	0/0:44,0:17:6.25:0,6,68	0/0:4,0:15:37.73:0,38,339	0/0:1,0:7:12.48:0,12,43	0/1:3,0:8:4.62:5,0,63	1/1:13,11:25:35.64:320,36,0	0/0:4,0:10:14.98:0,15,138	0/0:6,0:6:6.01:0,6,70	0/0:14,0:15:35.88:0,36,421	0/0:5,0:8:3.75:0,4,37	0/0:3,0:8:15.03:0,15,153	0/0:6,0:9:17.90:0,18,153	0/0:6,0:7:11.99:0,12,127	0/0:5,0:12:23.96:0,24,210	0/0:9,0:23:38.91:0,39,340	0/0:10,0:12:33.05:0,33,376	1/1:16,7:24:20.23:237,20,0	1/1:4,2:7:9:87,9,0	1/1:2,6:8:17.99:167,18,0	0/0:1,0:4:11.99:0,12,124	0/0:4,0:6:10.45:0,10,46	0/0:7,0:7:14.22:0,14,63	1/1:1,3:4:9.01:87,9,0	1/1:7,6:13:17.91:174,18,0	1/1:7,4:11:14.92:138,15,0	1/1:2,1:2:3:29,3,0
chr10	38794121	.	C	CA	2523.69	PASS	AB=0.702;AC=15;AF=0.268;AN=56;BaseQRankSum=-2.385;DP=347;FS=5.274;HRun=9;HaplotypeScore=39.8170;InbreedingCoeff=0.7916;MQ=77.09;MQ0=0;MQRankSum=-1.775;QD=21.76;ReadPosRankSum=-0.732;VQSLOD=3.8457;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:53.95:0,54,464	0/0:8,0:8:20.99:0,21,182	0/1:8,0:9:1.55:2,0,43	0/0:12,0:11:11.89:0,12,92	0/0:15,0:16:44.01:0,44,370	0/0:12,0:12:23.98:0,24,208	0/0:9,0:9:26.95:0,27,225	1/1:5,17:22:28.10:538,28,0	0/0:7,0:7:14.99:0,15,130	0/0:10,0:10:26.98:0,27,234	0/0:17,0:17:41.98:0,42,364	0/0:7,0:7:20.98:0,21,179	0/0:10,0:10:26.97:0,27,231	0/0:6,0:6:14.99:0,15,130	0/0:13,0:13:26.97:0,27,234	0/0:9,0:9:23.89:0,24,198	0/0:30,0:31:85.98:0,86,730	0/0:13,0:13:35.99:0,36,313	1/1:6,14:19:45.11:491,45,0	1/1:2,9:11:27.07:299,27,0	0/1:1,7:8:5:178,0,5	0/0:14,0:14:23.96:0,24,208	0/0:11,0:11:26.98:0,27,234	0/0:5,0:5:15:0,15,130	0/1:2,6:8:5.04:165,0,5	1/1:2,12:14:39.10:425,39,0	1/1:5,11:16:36.07:385,36,0	1/1:1,7:8:21.06:232,21,0
chr10	38794159	.	G	GA	2969.31	PASS	AB=0.647;AC=15;AF=0.268;AN=56;BaseQRankSum=-1.728;DP=368;FS=11.848;HRun=9;HaplotypeScore=40.9411;InbreedingCoeff=0.9037;MQ=67.45;MQ0=1;MQRankSum=-3.755;QD=24.54;ReadPosRankSum=-1.924;VQSLOD=2.8241;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,1:28:50.77:0,51,664	0/0:5,0:5:14.98:0,15,127	0/0:11,0:10:19.33:0,19,126	0/0:9,0:4:2.99:0,3,24	0/0:14,0:14:29.99:0,30,260	0/0:11,0:11:29.99:0,30,260	0/0:12,0:12:29.98:0,30,260	1/1:4,16:20:45.12:498,45,0	0/0:8,0:8:17.98:0,18,156	0/0:15,0:15:38.99:0,39,339	0/0:11,0:11:32.99:0,33,284	0/0:8,0:8:24:0,24,208	0/0:10,0:10:26.99:0,27,234	0/0:11,0:11:32.99:0,33,286	0/0:9,0:9:23.99:0,24,208	0/0:12,0:12:35.99:0,36,312	0/0:33,0:33:83.95:0,84,725	0/0:20,0:20:56.92:0,57,481	1/1:3,18:21:57.10:604,57,0	1/1:0,8:8:21.06:232,21,0	0/1:5,6:11:2:200,0,2	0/0:6,0:6:15:0,15,130	0/0:6,0:6:15:0,15,130	0/0:8,0:8:24:0,24,208	1/1:1,14:15:36.10:398,36,0	1/1:5,14:19:45.11:490,45,0	1/1:2,14:16:42.03:448,42,0	1/1:2,9:10:27.07:299,27,0
chr10	38794348	.	A	AGAGGCTGGCTCGCCC	7826.71	PASS	AC=24;AF=0.444;AN=54;BaseQRankSum=-4.947;DP=485;FS=18.121;HRun=0;HaplotypeScore=212.0490;InbreedingCoeff=0.9052;MQ=81.54;MQ0=0;MQRankSum=-8.470;QD=35.41;ReadPosRankSum=-3.490;VQSLOD=2.5395;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:39.12:0,39,1515	0/0:7,0:7:18.06:0,18,628	0/0:13,0:13:21.05:0,21,633	0/0:23,0:23:45.15:0,45,1281	0/0:14,0:14:18.06:0,18,604	1/1:12,4:17:18.06:1110,18,0	1/1:28,1:29:21.04:947,21,0	1/1:28,0:28:13.41:751,13,0	0/0:9,0:9:21.07:0,21,828	0/0:13,0:13:15.05:0,15,615	0/0:15,0:15:30.10:0,30,1261	1/1:11,1:13:6.02:425,6,0	0/0:7,0:7:15.05:0,15,543	0/0:21,0:21:33.11:0,33,1388	0/0:5,0:5:12.03:0,12,403	0/0:17,0:17:33.11:0,33,1129	0/0:49,0:49:99:0,105,3941	0/0:28,0:28:66.23:0,66,2549	1/1:22,1:25:18.06:843,18,0	./.	1/1:35,2:39:12.04:676,12,0	0/0:6,0:6:15.05:0,15,631	1/1:3,3:6:14.84:771,15,0	1/1:10,2:13:6.02:304,6,0	1/1:5,3:10:15.05:845,15,0	1/1:15,2:18:15.05:786,15,0	1/1:8,2:12:3.48:216,3,0	1/1:11,0:11:9:151,9,0
chr10	38794485	.	TTG	T	2378	PASS	AB=0.990;AC=35;AF=0.648;AN=54;BaseQRankSum=2.849;DP=362;FS=0.458;HRun=0;HaplotypeScore=64.9311;InbreedingCoeff=0.3720;MQ=59.45;MQ0=14;MQRankSum=-1.770;QD=9.11;ReadPosRankSum=-3.053;VQSLOD=2.7828;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:26:67.72:0,68,1002	1/1:2,0:2:5.97:46,6,0	0/0:22,0:8:6.18:0,6,105	0/1:22,0:11:21.89:22,0,32	0/1:22,0:22:55:55,0,107	1/1:2,8:10:20.59:226,21,0	1/1:1,11:11:21.07:281,21,0	1/1:20,3:23:59.93:414,60,0	0/1:9,0:9:9.11:9,0,62	0/0:11,0:11:33.07:0,33,471	0/0:6,0:6:14.82:0,15,183	1/1:0,7:7:11.89:161,12,0	1/1:4,0:4:8.03:56,8,0	0/0:9,0:8:16.33:0,16,97	0/1:9,0:9:16.42:16,0,54	0/1:6,0:6:10.90:11,0,33	0/1:32,0:30:65.82:66,0,142	0/0:25,0:25:56.86:0,57,972	1/1:12,1:11:25.32:182,25,0	1/1:9,1:10:20.74:131,21,0	1/1:6,0:4:4.04:17,4,0	./.	1/1:1,4:5:12.01:142,12,0	1/1:3,8:9:18.06:240,18,0	0/1:13,1:13:20.22:20,0,139	1/1:10,1:10:25.64:161,26,0	1/1:18,0:18:19.02:156,19,0	1/1:14,1:13:11.54:152,12,0
chr10	38794486	.	TG	T	3844.51	PASS	AB=0.943;AC=44;AF=0.786;AN=56;BaseQRankSum=5.022;DP=358;FS=1.690;HRun=1;HaplotypeScore=51.4754;InbreedingCoeff=0.5821;MQ=58.30;MQ0=14;MQRankSum=-0.707;QD=14.40;ReadPosRankSum=-1.852;VQSLOD=2.4293;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:26:54.43:0,54,774	1/1:2,0:2:5.97:46,6,0	0/1:19,1:7:3.81:4,0,100	0/0:17,3:9:3.19:0,3,40	1/1:22,1:23:33.54:234,34,0	1/1:8,2:10:20.84:179,21,0	1/1:12,0:11:20.76:138,21,0	1/1:12,11:23:62.24:638,62,0	1/1:9,0:9:2.68:42,3,0	0/0:11,0:11:33.07:0,33,375	0/0:6,0:6:14.82:0,15,150	1/1:7,0:7:11.87:79,12,0	1/1:4,0:4:6.47:52,6,0	1/1:9,0:8:0.59:22,1,0	1/1:8,1:9:8.20:76,8,0	1/1:4,2:6:3.03:77,3,0	1/1:29,2:29:21.16:232,21,0	0/0:25,1:26:13.32:0,13,705	1/1:8,5:11:29.91:293,30,0	1/1:7,3:10:23.93:247,24,0	1/1:4,2:4:6.01:67,6,0	1/1:1,0:1:3:25,3,0	1/1:5,0:5:11.80:75,12,0	1/1:11,0:9:17.77:117,18,0	0/1:13,1:13:13.49:69,0,13	1/1:5,5:9:27.03:328,27,0	1/1:6,11:17:38.63:465,39,0	1/1:8,7:13:26.44:341,26,0
chr10	38794514	.	G	GAACCC	4990.73	PASS	AC=16;AF=0.308;AN=52;BaseQRankSum=-4.970;DP=357;FS=18.616;HRun=0;HaplotypeScore=67.3266;InbreedingCoeff=0.9338;MQ=46.31;MQ0=29;MQRankSum=-6.865;QD=44.17;ReadPosRankSum=-2.898;VQSLOD=2.3269;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:25:53.23:0,53,1135	0/0:2,0:2:6.02:0,6,123	./.	./.	0/0:19,0:19:42.10:0,42,817	0/0:15,0:14:33.10:0,33,639	0/0:15,0:12:27.08:0,27,488	1/1:7,8:14:24.05:660,24,0	0/0:12,0:12:30:0,30,568	0/0:7,0:4:12.04:0,12,239	0/0:8,0:7:12.04:0,12,246	0/0:9,0:9:17.58:0,18,367	0/0:6,0:5:12.04:0,12,246	0/0:8,0:7:21.07:0,21,401	0/0:5,0:5:15.05:0,15,307	0/0:10,0:9:21.03:0,21,389	0/0:29,0:28:72.20:0,72,1397	0/0:29,0:27:72.23:0,72,1413	1/1:9,4:7:15.05:411,15,0	1/1:4,4:11:17.96:392,18,0	1/1:0,8:6:5.91:38,6,0	0/0:10,0:10:27.08:0,27,515	0/0:8,0:8:15.05:0,15,307	0/0:13,0:11:30.08:0,30,536	1/1:3,10:13:24.08:729,24,0	1/1:2,9:11:30.07:779,30,0	1/1:2,7:11:24.08:703,24,0	1/1:3,18:22:42.14:1279,42,0
chr10	38794642	.	A	AAATGAG	4192.67	PASS	AC=28;AF=0.667;AN=42;BaseQRankSum=0.340;DP=153;FS=10.011;HRun=0;HaplotypeScore=41.8121;InbreedingCoeff=0.7164;MQ=79.56;MQ0=2;MQRankSum=-5.472;QD=83.85;ReadPosRankSum=1.451;VQSLOD=4.2138;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:48.16:0,48,1197	1/1:1,0:1:3.01:96,3,0	0/0:21,0:8:10.85:0,11,212	0/0:18,0:9:18.23:0,18,258	./.	1/1:0,6:6:18.06:671,18,0	1/1:0,2:3:6.02:225,6,0	1/1:0,1:2:6.02:187,6,0	./.	0/0:8,0:8:24.07:0,24,565	0/0:9,0:9:27.09:0,27,691	1/1:2,0:2:3.01:111,3,0	./.	1/1:2,0:2:2.66:52,3,0	./.	1/1:1,0:1:3.01:52,3,0	0/0:2,0:1:3.01:0,3,73	0/0:26,0:26:75.26:0,75,1872	1/1:2,2:3:6.02:226,6,0	1/1:0,4:5:15.05:410,15,0	./.	./.	1/1:0,5:7:15.05:562,15,0	1/1:0,2:2:6.02:225,6,0	1/1:0,5:5:12.04:449,12,0	1/1:0,3:4:12.03:364,12,0	1/1:0,5:6:15.05:562,15,0	./.
chr10	38794693	.	G	GAACCC	243.89	PASS	AB=0.875;AC=6;AF=0.250;AN=24;BaseQRankSum=1.252;DP=115;FS=0.000;HRun=0;HaplotypeScore=32.2432;InbreedingCoeff=0.2134;MQ=42.33;MQ0=19;MQRankSum=-2.872;QD=14.35;ReadPosRankSum=-0.974;VQSLOD=2.1555;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:14:33.11:0,33,675	./.	./.	./.	0/0:1,0:1:3.01:0,3,61	./.	./.	1/1:2,1:1:3.01:91,3,0	./.	0/0:16,0:15:42.14:0,42,859	0/0:13,0:13:36.12:0,36,737	./.	./.	./.	./.	0/0:2,0:1:0:0,0,0	0/0:6,0:3:3.01:0,3,61	0/0:25,0:25:66.14:0,66,1306	0/1:5,0:3:72.77:73,0,114	1/1:4,2:2:3.01:91,3,0	0/0:1,0:1:3.01:0,3,61	./.	./.	./.	./.	0/1:2,1:3:82.26:82,0,114	./.	./.
chr10	38795141	.	G	GGTGTGT	2565.98	PASS	AB=0.753;AC=21;AF=0.420;AN=50;BaseQRankSum=-0.807;DP=601;FS=22.219;HRun=0;HaplotypeScore=146.0123;InbreedingCoeff=0.4307;MQ=66.53;MQ0=10;MQRankSum=-6.061;QD=10.18;ReadPosRankSum=-3.001;VQSLOD=0.0908;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:37:19.11:0,19,551	0/1:3,1:7:21.65:74,0,22	./.	./.	1/1:10,0:18:5.15:117,5,0	0/0:12,0:17:5.99:0,6,84	0/0:16,0:24:15.05:0,15,209	1/1:25,0:25:6.45:48,6,0	1/1:11,4:18:15.05:389,15,0	./.	0/0:13,0:15:9.16:0,9,251	0/0:12,0:16:6.02:0,6,84	1/1:7,1:10:6.91:136,7,0	1/1:22,1:23:14.84:396,15,0	1/1:20,6:27:12.04:284,12,0	0/1:18,8:31:30.47:674,0,30	0/1:21,1:30:2:253,0,2	0/0:20,0:24:37.62:0,38,688	1/1:15,0:17:3.65:10,4,0	0/0:22,0:29:16.45:0,16,273	0/0:38,0:51:26.43:0,26,360	0/1:8,6:17:26.82:311,0,27	0/0:8,0:18:6.49:0,6,81	0/1:14,0:23:0.01:0,0,0	1/1:1,0:2:3.01:36,3,0	0/0:24,0:25:2.17:0,2,65	0/0:12,0:13:3.87:0,4,27	0/0:5,0:7:0.77:0,1,2
chr10	38795158	.	G	GTGTGTG	1869.29	PASS	AB=1.000;AC=25;AF=0.463;AN=54;BaseQRankSum=-2.606;DP=637;FS=15.790;HRun=0;HaplotypeScore=144.1228;InbreedingCoeff=0.3809;MQ=53.24;MQ0=26;MQRankSum=-5.492;QD=6.01;ReadPosRankSum=-3.592;VQSLOD=0.5188;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:43:18.97:0,19,551	0/1:6,0:6:21.18:74,0,21	./.	0/1:29,0:15:0:0,0,0	1/1:18,0:17:2.14:37,2,0	0/1:18,0:18:18.18:18,0,75	0/0:23,0:22:18.06:0,18,251	1/1:37,0:37:8.51:35,9,0	1/1:21,0:21:15.05:389,15,0	1/1:14,0:13:1.25:3,1,0	0/0:14,0:13:9.16:0,9,251	0/0:20,0:18:6.02:0,6,84	1/1:13,0:11:6.91:136,7,0	1/1:14,6:21:8.82:204,9,0	1/1:27,0:27:6.96:176,7,0	0/1:30,0:30:33.48:580,0,33	1/1:31,0:28:8.16:171,8,0	0/0:24,0:23:33.24:0,33,647	1/1:23,0:21:2.57:7,3,0	0/0:29,0:28:16.05:0,16,272	0/0:58,0:58:26.43:0,26,360	0/1:20,0:20:32.37:167,0,32	0/0:16,0:16:6.49:0,6,81	0/0:21,0:20:3:0,3,42	1/1:3,0:3:3.01:36,3,0	0/0:27,0:24:2.47:0,2,65	0/0:14,0:14:3.67:0,4,26	0/0:11,0:11:0.77:0,1,2
chr10	38795339	.	C	CTT	2039.36	PASS	AB=0.698;AC=15;AF=0.268;AN=56;BaseQRankSum=0.463;DP=505;FS=3.869;HRun=11;HaplotypeScore=62.7253;InbreedingCoeff=0.8776;MQ=61.03;MQ0=3;MQRankSum=-3.275;QD=14.16;ReadPosRankSum=-3.232;VQSLOD=1.3773;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:38:81.23:0,81,745	0/0:8,0:8:21.02:0,21,204	0/0:17,0:8:20.19:0,20,149	0/0:11,0:3:6:0,6,52	0/0:15,0:16:32.69:0,33,297	0/0:20,0:20:44.78:0,45,416	0/0:16,0:18:26.59:0,27,294	0/1:17,13:19:19.09:106,0,19	0/0:11,0:11:30.02:0,30,291	0/0:18,0:20:26.82:0,27,361	0/0:11,0:12:20.75:0,21,186	0/0:19,0:19:35.89:0,36,326	0/0:15,0:15:35.75:0,36,326	0/0:17,0:17:35.98:0,36,343	0/0:15,0:15:30:0,30,290	0/0:17,0:19:40.53:0,41,342	0/0:28,0:28:81.08:0,81,772	0/0:24,0:26:50.58:0,51,512	1/1:4,7:9:15.04:199,15,0	1/1:9,17:27:51.75:610,52,0	1/1:4,8:15:20:211,20,0	0/0:16,0:17:23.71:0,24,215	0/0:13,0:13:30.01:0,30,291	0/0:19,0:20:44.74:0,45,406	1/1:5,9:18:38.01:431,38,0	1/1:8,12:17:21.05:281,21,0	1/1:3,7:11:17.55:226,18,0	1/1:1,6:8:12.04:174,12,0
chr10	38796594	.	AGT	A	3478.18	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=6.316;DP=597;FS=7.196;HRun=0;HaplotypeScore=81.4637;InbreedingCoeff=0.9997;MQ=82.20;MQ0=0;MQRankSum=-0.851;QD=39.52;ReadPosRankSum=4.042;VQSLOD=5.6241;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,105,1904	0/0:15,0:15:45.15:0,45,821	0/0:16,0:16:30.10:0,30,587	0/0:25,0:25:47.06:0,47,1095	0/0:28,0:28:84.29:0,84,1544	1/1:2,20:22:57.19:828,57,0	1/1:1,11:12:33.11:486,33,0	0/0:40,0:40:99:0,114,2059	0/0:17,0:17:51.17:0,51,947	0/0:16,0:16:48.16:0,48,892	0/0:23,0:23:69.24:0,69,1275	1/1:1,18:19:54.18:795,54,0	0/0:22,0:22:66.23:0,66,1215	0/0:15,0:15:39.13:0,39,718	0/0:22,0:22:63.22:0,63,1175	0/0:18,0:18:54.19:0,54,1007	0/0:32,0:32:96.30:0,96,1737	0/0:26,0:26:75.26:0,75,1399	0/0:29,0:29:87.30:0,87,1593	0/0:24,0:24:72.25:0,72,1314	0/0:15,0:15:42.13:0,42,752	0/0:14,0:14:42.14:0,42,761	1/1:0,18:18:51.17:751,51,0	1/1:0,17:17:42.14:619,42,0	0/0:15,0:15:42.14:0,42,772	0/0:26,0:26:75.26:0,75,1366	0/0:22,0:22:63.21:0,63,1109	0/0:12,0:12:36.12:0,36,652
chr10	38796784	.	GTCTCTCTCTCTCTCTCTCTC	G	3146.70	PASS	AB=0.636;AC=21;AF=0.477;AN=44;BaseQRankSum=5.710;DP=554;FS=1.341;HRun=0;HaplotypeScore=219.1555;InbreedingCoeff=0.5780;MQ=66.68;MQ0=20;MQRankSum=-5.228;QD=21.55;ReadPosRankSum=-0.650;VQSLOD=2.6479;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:18.06:0,18,629	1/1:6,2:8:3.01:159,3,0	./.	0/0:79,0:22:2.70:0,3,7	1/1:10,3:13:3.01:159,3,0	0/0:35,0:33:6.49:0,6,420	0/0:28,0:28:12.04:0,12,900	0/0:22,0:22:0:0,0,0	1/1:6,1:8:6.02:298,6,0	0/0:13,0:13:12.04:0,12,439	./.	0/0:18,0:19:17.47:0,17,922	1/1:13,7:19:18.06:951,18,0	./.	1/1:15,5:21:12.04:615,12,0	1/1:16,1:19:9.02:358,9,0	0/0:19,0:19:6.91:0,7,158	0/0:13,0:13:30.10:0,30,967	./.	1/1:8,0:11:3.01:140,3,0	./.	0/1:3,4:7:12.79:202,0,13	0/0:11,0:11:9.03:0,9,306	0/0:19,0:19:15.05:0,15,713	./.	1/1:15,0:18:3.01:140,3,0	1/1:7,0:9:3.01:140,3,0	1/1:6,0:10:3.01:140,3,0
chr10	38797128	.	GCCC	G	3721.79	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-2.058;DP=391;FS=31.349;HRun=11;HaplotypeScore=72.7160;InbreedingCoeff=0.9380;MQ=68.42;MQ0=0;MQRankSum=-2.340;QD=27.17;ReadPosRankSum=1.838;VQSLOD=0.4127;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:14:15.05:0,15,219	0/0:6,0:6:15.04:0,15,267	0/0:17,0:14:21.98:0,22,455	0/0:8,0:8:14.59:0,15,223	0/0:9,0:9:21.07:0,21,373	0/0:9,0:10:23.69:0,24,438	0/0:14,0:14:27.09:0,27,510	1/1:10,13:23:42.06:520,42,0	0/0:7,0:7:18.01:0,18,322	0/0:3,0:6:12.02:0,12,157	0/0:4,0:9:12.88:0,13,183	0/0:17,0:17:21.33:0,21,273	0/0:12,0:12:12.04:0,12,242	0/0:16,0:18:42.11:0,42,747	0/0:16,0:16:33.10:0,33,631	0/0:17,0:18:51.14:0,51,950	0/0:18,0:19:57.16:0,57,1062	0/0:6,0:10:15.05:0,15,251	1/1:5,18:23:14.60:630,15,0	1/1:1,8:9:24.07:315,24,0	1/1:3,18:21:30.47:392,30,0	0/0:3,0:3:2.96:0,3,19	0/0:15,0:15:29.23:0,29,190	0/0:25,0:25:47.28:0,47,300	1/1:5,11:16:30.07:394,30,0	1/1:1,12:13:33.03:410,33,0	1/1:1,22:23:63.20:824,63,0	1/1:0,9:9:18.06:237,18,0
chr10	38797138	.	CCA	C	1504.56	PASS	AB=1.000;AC=8;AF=0.143;AN=56;BaseQRankSum=-0.526;DP=484;FS=45.679;HRun=0;HaplotypeScore=84.7106;InbreedingCoeff=0.6995;MQ=69.51;MQ0=0;MQRankSum=1.095;QD=16.53;ReadPosRankSum=3.073;VQSLOD=1.7780;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:32.96:0,33,323	0/0:7,0:7:21.01:0,21,284	0/0:23,0:19:45.10:0,45,508	0/0:6,0:6:14.14:0,14,121	0/0:13,0:13:32.80:0,33,343	0/1:14,0:14:62.77:63,0,111	0/1:15,0:15:72.29:72,0,123	0/0:35,0:35:88.07:0,88,684	0/0:11,0:11:33.04:0,33,407	0/0:14,0:14:39:0,39,360	0/0:14,0:14:24.88:0,25,247	1/1:3,18:21:20.87:519,21,0	0/0:20,0:20:53.78:0,54,521	0/0:24,0:24:63.02:0,63,824	0/0:18,0:18:54.11:0,54,759	0/0:20,0:20:59.99:0,60,878	0/0:26,0:26:75.02:0,75,1042	0/0:13,0:13:30.01:0,30,335	0/0:19,0:19:43.59:0,44,224	0/0:14,0:14:34.08:0,34,207	0/0:22,0:22:32.90:0,33,212	0/0:9,0:9:26.95:0,27,238	1/1:0,14:14:27.09:377,27,0	1/1:0,27:27:45.15:627,45,0	0/0:15,0:15:32.04:0,32,150	0/0:17,0:17:22.57:0,23,215	0/0:23,0:22:53.87:0,54,251	0/0:13,0:13:27.71:0,28,161
chr10	38797680	.	G	GT	3649.85	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-12.290;DP=722;FS=0.408;HRun=5;HaplotypeScore=67.4847;InbreedingCoeff=1.0000;MQ=77.00;MQ0=0;MQRankSum=-3.259;QD=33.79;ReadPosRankSum=2.573;VQSLOD=4.1399;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:58:99:0,156,1668	0/0:15,0:15:39.08:0,39,411	0/0:24,0:24:60.14:0,60,638	0/0:26,0:26:53.82:0,54,517	0/0:33,0:33:93.23:0,93,1000	1/1:3,20:23:51.17:671,51,0	1/1:1,18:19:54.18:711,54,0	0/0:41,0:41:99:0,102,1085	0/0:23,0:23:66.15:0,66,701	0/0:28,0:28:66.16:0,66,709	0/0:20,0:20:57.14:0,57,612	1/1:2,15:17:45.14:585,45,0	0/0:19,0:19:54.11:0,54,570	0/0:24,0:24:69.16:0,69,733	0/0:35,0:35:99:0,99,1064	0/0:21,0:21:63.14:0,63,669	0/0:27,0:27:66.08:0,66,709	0/0:20,0:20:60.15:0,60,644	0/0:21,0:21:54.12:0,54,570	0/0:33,0:33:87.21:0,87,934	0/0:23,0:23:54.13:0,54,579	0/0:31,0:31:84.21:0,84,903	1/1:2,23:25:69.22:901,69,0	1/1:2,22:24:60.19:783,60,0	0/0:21,0:21:63.12:0,63,660	0/0:25,0:25:69.15:0,69,726	0/0:29,0:29:81.20:0,81,870	0/0:17,0:17:45.03:0,45,468
chr10	38799658	.	AGG	A	2413.11	PASS	AB=0.736;AC=20;AF=0.357;AN=56;BaseQRankSum=-8.565;DP=422;FS=10.348;HRun=11;HaplotypeScore=68.2622;InbreedingCoeff=0.4674;MQ=79.06;MQ0=4;MQRankSum=-0.022;QD=13.95;ReadPosRankSum=3.432;VQSLOD=1.0723;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:30:3.19:0,3,89	1/1:6,0:6:6.01:63,6,0	0/0:57,0:24:25.23:0,25,321	0/0:38,0:24:26.84:0,27,277	0/1:7,9:16:30.63:276,0,31	0/1:4,8:12:3.94:139,0,4	1/1:9,11:20:33.04:348,33,0	0/0:10,0:11:13.05:0,13,65	1/1:7,1:8:14.89:135,15,0	0/0:12,0:12:10.82:0,11,67	0/0:6,0:7:8.37:0,8,60	0/1:8,1:13:8.25:8,0,76	1/1:6,2:8:15.01:149,15,0	0/1:5,2:7:5.60:80,0,6	1/1:4,12:16:23.02:216,23,0	0/1:8,3:10:7.97:147,0,8	1/1:11,27:38:54.83:823,55,0	0/0:9,0:21:31.99:0,32,150	0/1:7,1:8:17.55:18,0,64	0/0:9,0:9:3.48:0,3,12	0/0:11,0:12:10.62:0,11,33	1/1:7,3:10:20.98:201,21,0	0/0:4,0:4:3.01:0,3,30	0/0:4,0:12:17.10:0,17,65	0/0:9,0:9:13.95:0,14,57	0/0:13,0:13:12.10:0,12,48	0/0:6,0:8:18.72:0,19,132	0/0:4,0:4:6:0,6,69
chr10	38799668	.	GGT	G	1184.23	PASS	AB=0.894;AC=18;AF=0.321;AN=56;BaseQRankSum=2.821;DP=394;FS=53.004;HRun=0;HaplotypeScore=67.0977;InbreedingCoeff=0.1663;MQ=80.98;MQ0=4;MQRankSum=-0.472;QD=6.89;ReadPosRankSum=7.686;VQSLOD=1.0525;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,1:27:9.18:0,9,279	0/1:4,3:7:43.98:44,0,52	0/0:48,0:20:38.87:0,39,525	0/0:39,0:27:37.31:0,37,448	0/1:19,1:20:99:154,0,161	1/1:10,0:10:13.89:87,14,0	0/1:15,2:17:22.33:144,0,22	0/0:17,0:17:34.11:0,34,324	0/1:4,4:8:0.73:116,0,1	0/0:8,0:8:15.76:0,16,136	0/0:6,0:6:11.21:0,11,95	0/1:10,0:10:9.82:10,0,34	1/1:4,2:6:2.21:105,2,0	0/1:7,1:8:53.38:53,0,78	1/1:15,1:16:16.74:103,17,0	0/1:8,2:9:64.18:93,0,64	1/1:32,4:36:9.22:363,9,0	0/0:20,0:20:27.27:0,27,215	0/0:12,0:12:24.39:0,24,234	0/1:3,0:3:2.07:3,0,2	0/0:9,0:9:9.77:0,10,80	0/1:9,0:9:32.75:49,0,33	0/0:2,0:2:5.99:0,6,65	0/0:17,0:17:21.90:0,22,147	0/0:7,0:7:4.08:0,4,66	0/1:12,0:12:28.69:29,0,104	0/0:7,0:7:11.77:0,12,160	0/0:3,0:3:9.01:0,9,111
chr10	38802232	.	AT	A	5103.90	PASS	AB=1.000;AC=35;AF=0.625;AN=56;BaseQRankSum=8.367;DP=474;FS=1.391;HRun=12;HaplotypeScore=57.3096;InbreedingCoeff=0.9136;MQ=72.27;MQ0=0;MQRankSum=0.109;QD=15.42;ReadPosRankSum=0.182;VQSLOD=5.6921;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:55.32:0,55,532	1/1:0,8:8:23.91:186,24,0	0/0:11,0:7:4.25:0,4,30	0/1:27,0:19:0.04:0,0,40	1/1:5,21:26:32.17:423,32,0	0/0:20,0:20:45.05:0,45,446	0/0:13,0:13:7.14:0,7,251	1/1:21,19:40:56.70:439,57,0	1/1:1,11:12:32.87:255,33,0	0/0:19,1:20:18.69:0,19,356	0/0:13,0:13:33.06:0,33,332	0/0:10,0:10:21.04:0,21,213	1/1:2,8:10:26.88:207,27,0	1/1:4,7:11:15.38:117,15,0	1/1:0,12:13:34.91:261,35,0	1/1:4,18:22:53.78:416,54,0	1/1:2,17:19:44.80:348,45,0	0/0:6,0:6:18.04:0,18,183	1/1:6,18:26:28.37:364,28,0	1/1:4,20:24:56.75:441,57,0	1/1:1,6:7:11.95:93,12,0	1/1:1,7:8:14.88:116,15,0	0/0:14,0:14:30.95:0,31,306	0/0:11,0:12:26.97:0,27,261	1/1:2,17:19:31.21:352,31,0	1/1:4,24:28:65.66:506,66,0	1/1:3,20:23:59.76:464,60,0	1/1:1,7:8:14.94:116,15,0
chr10	38803111	.	A	AG	2928.63	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-8.514;DP=478;FS=6.459;HRun=7;HaplotypeScore=51.1059;InbreedingCoeff=0.9620;MQ=70.79;MQ0=1;MQRankSum=-1.658;QD=25.92;ReadPosRankSum=-1.310;VQSLOD=3.6491;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:51.07:0,51,492	0/0:10,0:10:24.04:0,24,232	0/0:19,0:19:41:0,41,354	0/0:25,0:19:46.90:0,47,416	0/0:20,0:20:57.05:0,57,542	0/0:18,0:18:45.07:0,45,434	0/0:22,0:22:58.33:0,58,553	1/1:6,14:20:33.09:385,33,0	0/0:16,0:16:39.06:0,39,377	0/0:25,0:25:72.12:0,72,695	0/0:13,0:13:39.06:0,39,377	0/0:14,0:14:42.05:0,42,399	0/0:11,0:11:27.04:0,27,260	0/0:10,0:10:30.05:0,30,289	0/0:15,0:15:42.07:0,42,405	0/0:24,0:24:69.09:0,69,661	0/0:23,0:23:60.06:0,60,571	0/0:9,0:9:24.03:0,24,232	1/1:2,9:11:27.05:308,27,0	1/1:0,16:16:42.13:507,42,0	1/1:2,13:15:33.10:399,33,0	0/0:21,0:21:57.08:0,57,545	0/0:16,0:16:45.07:0,45,435	0/0:19,0:19:45.05:0,45,428	0/0:15,0:15:42.06:0,42,406	1/1:7,18:25:2.21:579,2,0	1/1:0,17:16:51.16:616,51,0	1/1:0,9:9:27.08:326,27,0
chr10	38803538	.	C	CTT	2827.28	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=0.669;DP=579;FS=3.246;HRun=14;HaplotypeScore=91.0678;InbreedingCoeff=0.9050;MQ=63.41;MQ0=4;MQRankSum=-4.054;QD=15.28;ReadPosRankSum=-1.710;VQSLOD=2.6499;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:41.25:0,41,327	0/0:5,0:7:8.67:0,9,104	0/0:18,0:8:8.46:0,8,52	0/0:12,0:10:11.26:0,11,81	0/0:25,0:29:46.81:0,47,378	0/0:19,0:18:44.87:0,45,375	0/0:20,0:21:35.30:0,35,280	1/1:20,9:32:51.69:530,52,0	0/0:17,0:17:41.65:0,42,334	0/0:20,0:19:23.65:0,24,238	0/0:21,0:24:27.92:0,28,286	0/0:8,0:9:20.89:0,21,172	0/0:22,0:25:38.07:0,38,336	0/0:19,0:21:32.48:0,32,300	0/0:25,0:24:45.93:0,46,383	0/0:15,0:16:35.54:0,36,283	0/0:19,0:19:24.16:0,24,205	0/0:26,0:27:62.12:0,62,485	1/1:8,2:15:2.01:214,2,0	1/1:9,16:29:49.53:552,50,0	1/1:3,4:9:10.76:95,11,0	0/0:15,0:15:23.74:0,24,200	0/0:24,0:26:38.24:0,38,307	0/0:12,0:12:5.82:0,6,50	1/1:4,15:21:10.96:376,11,0	1/1:15,17:33:39.30:610,39,0	1/1:4,15:21:29.64:332,30,0	1/1:10,9:19:30.01:314,30,0
chr10	38804365	.	C	CTTT	7505.14	PASS	AB=0.632;AC=44;AF=0.786;AN=56;BaseQRankSum=-2.448;DP=372;FS=5.599;HRun=11;HaplotypeScore=64.1980;InbreedingCoeff=0.6886;MQ=56.70;MQ0=7;MQRankSum=-1.879;QD=25.44;ReadPosRankSum=-2.246;VQSLOD=3.0490;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:50.15:0,50,559	1/1:1,5:8:15.03:232,15,0	1/1:7,0:7:2.04:6,2,0	0/0:12,0:10:4.20:0,4,91	1/1:11,11:22:41.98:607,42,0	1/1:0,10:11:18.06:339,18,0	1/1:2,5:6:15.05:282,15,0	1/1:16,5:20:26.89:270,27,0	1/1:8,7:14:23.91:289,24,0	0/0:9,0:11:17.86:0,18,229	0/0:10,0:10:27.06:0,27,300	1/1:7,1:9:9.61:117,10,0	1/1:5,11:16:33.08:564,33,0	1/1:2,2:4:12:171,12,0	1/1:5,15:24:42.07:644,42,0	1/1:3,12:18:39.08:623,39,0	1/1:6,13:19:28.81:527,29,0	0/0:15,0:14:16.24:0,16,232	0/1:4,5:7:16.20:254,0,16	1/1:11,0:11:11.93:113,12,0	1/1:4,8:12:12.04:212,12,0	1/1:1,11:12:26.95:391,27,0	1/1:1,8:10:23.97:327,24,0	1/1:4,3:7:17.93:230,18,0	1/1:5,4:10:16.78:322,17,0	0/1:7,9:18:34.10:443,0,34	1/1:7,7:14:18.01:270,18,0	1/1:0,5:7:18.02:272,18,0
chr10	38804582	.	C	CT	213.21	PASS	AB=0.833;AC=4;AF=0.071;AN=56;BaseQRankSum=-0.686;DP=381;FS=14.020;HRun=10;HaplotypeScore=46.0904;InbreedingCoeff=0.4119;MQ=77.19;MQ0=0;MQRankSum=-0.162;QD=6.09;ReadPosRankSum=-0.380;VQSLOD=0.0810;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:21:46.94:0,47,371	0/0:5,0:5:14.93:0,15,116	0/1:21,0:16:18.39:18,0,108	0/0:13,0:12:1.45:0,1,37	0/0:17,0:17:32.94:0,33,270	0/1:3,3:6:11.15:84,0,11	1/1:0,8:8:21.05:224,21,0	0/0:16,0:17:40.96:0,41,323	0/0:17,0:17:41.95:0,42,345	0/0:15,0:15:41.95:0,42,345	0/0:14,0:14:35.93:0,36,292	0/0:12,0:12:23.97:0,24,197	0/0:14,0:14:32.95:0,33,268	0/0:12,0:12:32.94:0,33,267	0/0:17,0:17:35.92:0,36,295	0/0:13,0:13:26.96:0,27,222	0/0:30,0:31:76.92:0,77,622	0/0:13,0:13:29.94:0,30,243	0/0:11,0:11:31.91:0,32,244	0/0:14,0:14:38.95:0,39,320	0/0:6,0:6:11.99:0,12,99	0/0:13,0:13:32.95:0,33,270	0/0:7,0:7:14.98:0,15,123	0/0:10,0:10:23.97:0,24,197	0/0:11,0:11:29.96:0,30,246	0/0:14,0:14:29.71:0,30,234	0/0:20,0:19:47.86:0,48,386	0/0:6,0:6:17.98:0,18,148
chr10	38804832	.	AT	A	9320.77	PASS	AC=50;AF=1.000;AN=50;DP=379;FS=0.000;HRun=1;HaplotypeScore=303.4089;InbreedingCoeff=-0.0095;MQ=33.48;MQ0=0;QD=24.72;VQSLOD=3.8345;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,13:24:31.91:385,32,0	1/1:1,5:5:15.04:182,15,0	./.	./.	1/1:3,14:17:42.09:524,42,0	1/1:9,9:18:27.09:346,27,0	1/1:7,3:10:9.03:116,9,0	1/1:18,6:24:68.51:797,69,0	1/1:9,12:21:36.12:465,36,0	1/1:9,5:14:33.11:421,33,0	1/1:2,8:10:24.04:291,24,0	1/1:5,13:18:39.13:502,39,0	1/1:5,8:13:24.08:303,24,0	1/1:5,8:13:24.08:310,24,0	1/1:8,20:28:57.18:721,57,0	1/1:4,13:17:39.13:504,39,0	1/1:0,17:17:39.13:504,39,0	1/1:0,9:9:21.07:269,21,0	1/1:0,9:9:24.01:287,24,0	1/1:3,3:6:9.03:116,9,0	1/1:3,4:7:11.36:105,11,0	1/1:9,5:14:15.05:194,15,0	1/1:6,8:14:27.08:336,27,0	1/1:6,4:10:12.04:155,12,0	1/1:7,5:12:15.05:192,15,0	1/1:12,7:19:57.18:733,57,0	1/1:12,15:27:45.14:561,45,0	./.
chr10	38804842	.	GA	G	7919.50	PASS	AC=52;AF=1.000;AN=52;BaseQRankSum=0.564;DP=357;FS=0.000;HRun=2;HaplotypeScore=284.1269;InbreedingCoeff=-0.0108;MQ=33.54;MQ0=0;MQRankSum=0.392;QD=22.37;ReadPosRankSum=3.089;VQSLOD=4.0877;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,12:18:36.09:399,36,0	1/1:0,6:5:15.04:169,15,0	./.	./.	1/1:1,14:15:42.11:467,42,0	1/1:0,17:17:20.04:237,20,0	1/1:0,13:13:18.05:204,18,0	1/1:0,23:23:59.89:646,60,0	1/1:4,12:16:36.10:410,36,0	1/1:0,14:15:36.10:405,36,0	1/1:1,8:9:24.06:268,24,0	1/1:2,13:15:39.07:409,39,0	1/1:0,12:12:21.06:234,21,0	1/1:0,14:14:22.34:275,22,0	1/1:0,22:22:42.12:483,42,0	1/1:3,13:16:42.07:467,42,0	1/1:5,12:17:36.10:404,36,0	1/1:2,4:6:12.03:136,12,0	1/1:0,8:8:20.85:216,21,0	1/1:0,8:8:15.04:171,15,0	1/1:0,4:4:9.49:99,9,0	1/1:0,16:16:21.05:227,21,0	1/1:0,14:15:30.04:317,30,0	1/1:0,12:12:14.56:156,15,0	1/1:0,13:13:13.96:170,14,0	1/1:0,16:16:48.10:531,48,0	1/1:1,23:24:33.01:351,33,0	1/1:0,4:4:6.02:71,6,0
chr10	38806504	.	G	GT	1679.84	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-9.151;DP=654;FS=0.561;HRun=4;HaplotypeScore=68.5340;InbreedingCoeff=0.9952;MQ=94.42;MQ0=0;MQRankSum=-0.381;QD=34.28;ReadPosRankSum=1.108;VQSLOD=4.1966;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:90.26:0,90,1020	0/0:17,0:17:51.13:0,51,568	0/0:32,0:31:51.85:0,52,788	0/0:35,0:31:49.69:0,50,654	0/0:22,0:22:57.16:0,57,646	1/1:1,33:35:96.32:1309,96,0	1/1:0,14:14:36.12:492,36,0	0/0:40,0:39:96.25:0,96,1078	0/0:20,0:20:57.16:0,57,647	0/0:20,0:20:54.14:0,54,598	0/0:27,0:27:78.21:0,78,874	0/0:23,0:23:63.16:0,63,705	0/0:23,0:23:60.14:0,60,665	0/0:15,0:15:42.12:0,42,476	0/0:27,0:27:81.23:0,81,919	0/0:21,0:21:57.16:0,57,646	0/0:21,0:21:54.15:0,54,613	0/0:9,0:9:18.05:0,18,204	0/0:21,0:21:60.15:0,60,664	0/0:29,0:29:75.21:0,75,851	0/0:36,0:36:96.27:0,96,1089	0/0:18,0:18:48.14:0,48,544	0/0:12,0:12:27.08:0,27,306	0/0:23,0:23:69.20:0,69,782	0/0:21,0:21:57.16:0,57,647	0/0:21,0:21:51.14:0,51,579	0/0:25,0:25:75.15:0,75,824	0/0:13,0:13:39.10:0,39,432
chr10	38806704	.	A	ATGTG	19347.85	PASS	AB=0.777;AC=43;AF=0.768;AN=56;BaseQRankSum=3.923;DP=651;FS=23.412;HRun=0;HaplotypeScore=145.2107;InbreedingCoeff=0.6842;MQ=66.70;MQ0=1;MQRankSum=-0.918;QD=36.71;ReadPosRankSum=2.789;VQSLOD=3.4247;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:13.47:0,13,713	1/1:2,4:8:14.79:307,15,0	0/0:35,0:30:8.45:0,8,424	0/0:30,0:27:32.86:0,33,535	1/1:5,1:22:45.15:807,45,0	1/1:3,0:14:22.43:100,22,0	1/1:8,0:16:21.89:97,22,0	0/1:22,8:30:7.74:830,0,8	1/1:5,13:21:42.01:925,42,0	0/0:21,0:21:48.15:0,48,766	0/0:13,0:15:39.12:0,39,603	1/1:5,0:22:48.36:231,48,0	1/1:8,19:30:59.90:1353,60,0	1/1:8,14:23:50.91:1186,51,0	1/1:10,28:40:93.05:2219,93,0	1/1:14,16:33:61.49:1312,61,0	1/1:9,22:31:63.22:1514,63,0	0/1:11,0:12:19.22:19,0,199	1/1:10,6:17:33.11:765,33,0	1/1:10,13:27:41.67:910,42,0	1/1:7,12:20:26.41:601,26,0	1/1:4,20:27:62.68:1425,63,0	1/1:2,0:26:65.23:302,65,0	0/1:3,0:19:5.50:142,0,5	1/1:2,16:20:47.90:1118,48,0	1/1:5,14:21:4.13:1043,4,0	1/1:11,16:29:54.39:1261,54,0	1/1:3,14:17:33.34:880,33,0
chr10	38807268	.	C	CA	2163.29	PASS	AB=0.967;AC=18;AF=0.321;AN=56;BaseQRankSum=-7.949;DP=420;FS=6.143;HRun=12;HaplotypeScore=51.9945;InbreedingCoeff=0.7607;MQ=68.04;MQ0=11;MQRankSum=0.660;QD=11.95;ReadPosRankSum=-2.796;VQSLOD=2.2885;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:17,1:18:21.51:0,22,321	0/0:3,0:3:8.95:0,9,66	0/1:22,0:11:2.94:3,0,55	0/0:17,0:8:13.08:0,13,86	0/0:13,0:12:6.30:0,6,173	0/0:16,1:17:12.56:0,13,255	0/0:15,0:16:31.83:0,32,223	1/1:7,19:26:33.30:442,33,0	0/0:7,0:7:14.89:0,15,109	0/0:9,0:9:14.88:0,15,109	0/0:16,1:18:14.59:0,15,261	0/0:16,0:15:16.77:0,17,199	0/0:10,0:10:11.78:0,12,87	0/0:11,0:11:17.81:0,18,131	0/0:8,0:8:11.89:0,12,88	0/0:11,0:11:20.86:0,21,153	0/1:13,1:14:24.28:24,0,182	0/0:21,0:22:25.53:0,26,291	1/1:6,11:14:26.15:271,26,0	1/1:3,11:14:33.05:321,33,0	1/1:9,9:18:21.03:204,21,0	0/0:15,1:16:9.57:0,10,233	0/0:7,0:8:16.92:0,17,115	0/0:17,0:17:38.72:0,39,284	1/1:8,8:15:10.97:251,11,0	1/1:1,10:11:30.02:282,30,0	1/1:5,22:26:38.96:379,39,0	1/1:6,8:14:2.13:182,2,0
chr10	38807381	.	C	CT	1139.98	PASS	AB=0.902;AC=36;AF=0.692;AN=52;BaseQRankSum=0.266;DP=336;FS=3.255;HRun=16;HaplotypeScore=70.4152;InbreedingCoeff=0.0622;MQ=67.87;MQ0=6;MQRankSum=-2.053;QD=4.10;ReadPosRankSum=-1.210;VQSLOD=0.8274;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:12,1:15:6.17:6,0,49	0/1:3,1:4:10.77:18,0,11	0/0:43,0:16:8.68:0,9,73	0/1:33,0:11:5.26:5,0,9	0/1:10,1:11:11.45:37,0,11	0/1:8,1:13:7.88:8,0,30	0/1:5,1:6:15.46:15,0,24	1/1:21,1:28:13.47:213,13,0	0/0:3,0:3:2.70:0,3,13	0/1:15,0:15:14.93:15,0,77	0/0:9,0:10:7.01:0,7,38	1/1:4,2:6:8.78:60,9,0	0/1:6,1:7:9.93:32,0,10	./.	1/1:4,2:6:4.64:46,5,0	1/1:4,1:5:5.97:45,6,0	0/1:9,3:13:41.53:62,0,42	0/1:13,1:16:0.60:1,0,70	1/1:7,1:9:11.75:76,12,0	1/1:9,1:12:15.28:84,15,0	1/1:2,0:6:11.46:61,11,0	1/1:5,0:5:2.99:24,3,0	1/1:3,4:7:5.99:48,6,0	./.	1/1:12,1:14:11.07:137,11,0	1/1:13,0:14:2.02:26,2,0	1/1:17,1:20:26.28:163,26,0	1/1:2,1:9:20.12:111,20,0
chr10	38807409	.	ATGT	A	497.07	PASS	AB=0.965;AC=23;AF=0.426;AN=54;BaseQRankSum=4.580;DP=309;FS=17.989;HRun=0;HaplotypeScore=57.5618;InbreedingCoeff=-0.0765;MQ=60.76;MQ0=17;MQRankSum=-5.356;QD=2.54;ReadPosRankSum=4.316;VQSLOD=-0.1956;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:20.65:0,21,294	0/0:2,0:2:5.36:0,5,33	0/1:63,0:12:15.96:16,0,101	0/0:50,0:15:23.40:0,23,181	0/1:6,0:6:3.48:3,0,59	0/1:11,0:11:31.57:32,0,51	0/1:4,0:4:29.07:29,0,36	0/1:29,0:29:53.63:54,0,185	1/1:2,0:3:7.87:43,8,0	0/0:16,0:16:36.18:0,36,436	0/0:4,0:4:11.21:0,11,112	1/1:4,0:6:17.92:158,18,0	0/1:5,0:5:3.01:3,0,22	./.	0/1:3,0:3:15.13:15,0,20	0/1:3,0:3:9.45:9,0,15	0/1:11,0:11:13.28:13,0,90	0/0:17,0:17:43.97:0,44,563	0/1:9,0:9:19.54:20,0,52	0/1:7,0:7:17.19:17,0,43	0/0:3,0:3:4.49:0,4,41	0/0:1,0:1:2.50:0,2,9	1/1:2,0:2:5.91:38,6,0	1/1:2,0:1:2.98:22,3,0	0/1:9,2:11:23.57:98,0,24	1/1:2,1:2:5.60:43,6,0	0/1:12,1:12:31.70:47,0,32	0/0:5,0:4:5.16:0,5,41
chr10	38807996	.	T	TA	2627.26	PASS	AC=54;AF=0.964;AN=56;BaseQRankSum=1.698;DP=176;FS=15.667;HRun=0;HaplotypeScore=76.2168;InbreedingCoeff=0.2572;MQ=34.99;MQ0=2;MQRankSum=1.218;QD=15.27;ReadPosRankSum=2.132;VQSLOD=4.6735;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,11:13:29.22:173,29,0	1/1:0,1:1:2.92:17,3,0	1/1:3,0:2:3.01:31,3,0	0/0:4,0:2:2.94:0,3,18	1/1:0,10:10:13.33:71,13,0	1/1:0,2:2:5.85:34,6,0	1/1:0,6:6:14.64:85,15,0	1/1:0,5:3:9:83,9,0	1/1:0,8:8:23.09:137,23,0	1/1:0,6:7:16.49:154,16,0	1/1:0,9:9:16.18:74,16,0	1/1:0,10:10:29.45:184,29,0	1/1:0,7:7:19.60:103,20,0	1/1:1,4:5:14.63:89,15,0	1/1:0,17:17:49.60:284,50,0	1/1:1,3:4:8.79:51,9,0	1/1:0,7:7:17.38:95,17,0	1/1:0,5:5:14.93:112,15,0	1/1:0,10:10:29.97:261,30,0	1/1:0,6:6:12.14:68,12,0	1/1:0,4:4:8.79:52,9,0	1/1:0,1:1:2.90:16,3,0	1/1:0,2:2:2.84:14,3,0	1/1:0,2:2:2.84:14,3,0	1/1:0,5:5:14.58:82,15,0	1/1:0,12:12:35.86:275,36,0	1/1:0,8:8:22.52:126,23,0	1/1:0,3:3:3.92:34,4,0
chr10	38808000	.	AT	A	1096.56	PASS	AB=0.500;AC=53;AF=0.981;AN=54;BaseQRankSum=-0.209;DP=168;FS=0.000;HRun=1;HaplotypeScore=82.5174;InbreedingCoeff=0.2126;MQ=28.59;MQ0=1;MQRankSum=-0.355;QD=6.57;ReadPosRankSum=0.685;VQSLOD=0.4718;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,11:11:17.75:54,18,0	1/1:0,1:1:2.04:6,2,0	1/1:2,0:1:2.90:16,3,0	./.	1/1:0,10:10:6.86:18,7,0	1/1:0,2:2:4.07:12,4,0	1/1:0,6:6:10.37:32,10,0	1/1:0,5:3:8.63:51,9,0	1/1:0,8:8:14.94:53,15,0	1/1:1,6:7:11.27:84,11,0	1/1:0,9:9:9.51:51,10,0	1/1:0,10:10:22.83:79,23,0	1/1:0,7:7:8.09:29,8,0	1/1:0,4:4:7.49:22,7,0	1/1:0,17:17:33.92:104,34,0	1/1:0,3:3:6.29:20,6,0	1/1:0,7:7:10.60:31,11,0	1/1:0,5:5:13.52:58,14,0	1/1:0,10:10:28.50:154,29,0	1/1:0,6:6:10.83:42,11,0	1/1:0,4:4:6.29:19,6,0	1/1:0,1:1:1.82:5,2,0	1/1:0,2:2:1.25:3,1,0	1/1:0,2:2:1.25:3,1,0	1/1:0,5:5:9.75:29,10,0	1/1:0,12:12:32.93:147,33,0	1/1:0,8:8:12.96:43,13,0	0/1:0,3:3:2.01:9,0,2
chr10	38809782	.	AAACAAAAC	A	2697.11	PASS	AC=34;AF=0.680;AN=50;BaseQRankSum=-4.655;DP=312;FS=14.096;HRun=0;HaplotypeScore=66.8033;InbreedingCoeff=0.6951;MQ=56.45;MQ0=6;MQRankSum=-5.074;QD=15.50;ReadPosRankSum=-3.875;VQSLOD=-0.5135;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:50.93:0,51,1527	./.	0/0:36,0:11:21.57:0,22,227	0/0:31,0:11:11.29:0,11,413	1/1:8,0:8:3.01:35,3,0	1/1:7,0:7:20.97:211,21,0	1/1:6,0:6:17.23:172,17,0	1/1:19,1:20:42.73:632,43,0	1/1:7,0:7:2.99:23,3,0	0/0:16,0:15:41.99:0,42,1336	0/0:11,0:11:29.98:0,30,832	0/0:4,0:3:1.11:0,1,50	1/1:8,0:8:18.02:216,18,0	./.	1/1:13,1:14:6:63,6,0	1/1:0,12:12:6.02:120,6,0	1/1:13,0:12:20.10:254,20,0	0/0:13,0:13:33:0,33,1067	1/1:12,0:11:30.07:411,30,0	1/1:13,0:12:8.50:90,9,0	1/1:8,0:8:3:26,3,0	1/1:3,0:3:9.03:119,9,0	0/0:1,0:1:3.01:0,3,30	1/1:3,0:3:1.25:3,1,0	1/1:7,0:7:3.01:43,3,0	1/1:21,0:21:38.94:427,39,0	1/1:12,0:11:3:25,3,0	./.
chr10	38809783	.	AACAAAAC	A	3080.31	PASS	AB=1.000;AC=35;AF=0.700;AN=50;BaseQRankSum=-6.375;DP=308;FS=11.785;HRun=0;HaplotypeScore=60.3039;InbreedingCoeff=0.6339;MQ=56.72;MQ0=6;MQRankSum=-5.360;QD=17.60;ReadPosRankSum=-4.263;VQSLOD=-0.1894;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:50.72:0,51,1406	./.	0/0:36,0:11:21.01:0,21,208	0/0:31,0:11:5.82:0,6,338	1/1:8,0:8:3.01:37,3,0	1/1:7,0:7:21.07:280,21,0	1/1:6,0:6:18.03:221,18,0	1/1:5,15:20:42.73:685,43,0	1/1:7,0:7:2.79:40,3,0	0/0:16,0:15:41.99:0,42,1219	0/0:11,0:11:29.98:0,30,753	0/1:4,0:3:12.30:12,0,34	1/1:7,0:7:18.02:217,18,0	./.	1/1:3,11:14:6.02:80,6,0	1/1:12,0:12:6.02:107,6,0	1/1:13,0:12:20.48:256,20,0	0/0:12,0:12:33.03:0,33,966	1/1:12,0:11:30.07:430,30,0	1/1:3,10:12:9.01:138,9,0	1/1:8,0:8:3.01:40,3,0	1/1:3,0:3:9.03:120,9,0	0/0:1,0:1:2.92:0,3,17	1/1:3,0:3:1.25:3,1,0	1/1:7,0:7:3.01:56,3,0	1/1:0,19:19:39.04:492,39,0	1/1:1,11:11:3.01:40,3,0	./.
chr10	38809784	.	ACAAAAC	A	3159.83	PASS	AB=1.000;AC=35;AF=0.700;AN=50;BaseQRankSum=-6.933;DP=302;FS=13.951;HRun=0;HaplotypeScore=55.4538;InbreedingCoeff=0.6351;MQ=59.07;MQ0=6;MQRankSum=-5.129;QD=18.81;ReadPosRankSum=-3.600;VQSLOD=0.4861;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:53.73:0,54,1326	./.	0/0:36,0:12:24.42:0,24,229	0/0:31,0:11:8.61:0,9,298	1/1:0,8:8:3.01:38,3,0	1/1:7,0:7:21.07:281,21,0	1/1:6,0:6:18.06:238,18,0	1/1:16,2:18:43:692,43,0	1/1:0,7:7:3.01:40,3,0	0/0:17,0:16:45:0,45,1167	0/0:10,0:10:30.10:0,30,674	0/1:4,0:3:21.08:27,0,21	1/1:7,0:7:18.02:217,18,0	./.	1/1:12,0:12:6.02:80,6,0	1/1:12,0:12:6.02:100,6,0	1/1:13,0:12:20.15:255,20,0	0/0:12,0:12:31.92:0,32,875	1/1:2,9:10:30.07:431,30,0	1/1:11,2:12:9.03:142,9,0	1/1:0,7:7:3.01:40,3,0	1/1:3,0:3:9.03:120,9,0	0/0:1,0:1:1.55:0,2,4	1/1:3,0:3:1.55:4,2,0	1/1:0,7:7:3.01:76,3,0	1/1:19,0:19:39.04:511,39,0	1/1:11,0:11:3.01:40,3,0	./.
chr10	38811282	.	TTTTTTTTTTTTTTTCC	T	5968.23	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=10.580;DP=438;FS=1.301;HRun=0;HaplotypeScore=160.1819;InbreedingCoeff=0.9592;MQ=49.31;MQ0=16;MQRankSum=-8.638;QD=87.77;ReadPosRankSum=9.507;VQSLOD=4.0270;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:40:99:0,114,6959	0/0:5,0:4:12.04:0,12,788	0/0:18,0:6:18.06:0,18,707	0/0:15,0:6:15.05:0,15,450	0/0:15,0:15:44.35:0,44,2284	1/1:0,10:10:21.07:905,21,0	1/1:0,16:16:36.12:1460,36,0	0/0:23,0:20:60.21:0,60,2813	0/0:13,0:13:30.06:0,30,1604	0/0:19,0:18:51.16:0,51,2655	0/0:9,0:7:21.07:0,21,875	1/1:0,14:14:33.11:1422,33,0	0/0:17,0:16:38.43:0,38,2246	0/0:10,0:9:24.08:0,24,1241	0/0:13,0:12:36.12:0,36,1903	0/0:12,0:12:36.12:0,36,2135	0/0:16,0:14:34.18:0,34,1326	0/0:25,0:22:33.11:0,33,1867	0/0:15,0:13:36.12:0,36,1738	0/0:19,0:19:39.12:0,39,2146	0/0:11,0:10:22.32:0,22,1037	0/0:12,0:12:36.12:0,36,1799	1/1:0,14:14:28.84:1290,29,0	1/1:1,13:14:21.07:892,21,0	0/0:17,0:16:39.13:0,39,2223	0/0:19,0:19:54.19:0,54,3088	0/0:21,0:20:51.18:0,51,2873	0/0:2,0:2:6.02:0,6,338
chr10	38812290	.	C	CTT	6028.89	PASS	AB=0.759;AC=27;AF=0.482;AN=56;BaseQRankSum=-3.713;DP=448;FS=15.501;HRun=6;HaplotypeScore=83.3408;InbreedingCoeff=-0.2577;MQ=53.05;MQ0=9;MQRankSum=-1.831;QD=18.16;ReadPosRankSum=2.028;VQSLOD=1.6914;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:63.07:0,63,766	0/1:4,10:13:34.72:384,0,35	0/0:17,0:6:6.02:0,6,79	0/0:20,0:15:9.77:0,10,118	1/1:17,22:37:33.72:808,34,0	0/1:9,3:12:19.38:198,0,19	0/1:4,4:8:28.19:142,0,28	0/1:27,5:31:90.51:461,0,91	0/1:4,9:12:76.58:245,0,77	0/0:24,0:24:69.22:0,69,918	0/0:19,0:19:51.02:0,51,647	0/1:8,0:7:27.72:88,0,28	0/1:13,5:18:99:350,0,108	0/1:8,5:13:36.76:43,0,37	0/1:16,2:18:99:270,0,191	0/1:8,5:13:41.80:301,0,42	0/1:6,10:16:0.10:226,0,0	0/0:12,0:12:27.05:0,27,337	0/1:18,3:20:49.61:416,0,50	0/1:18,7:24:25.69:478,0,26	1/1:4,0:4:6.02:104,6,0	0/1:7,3:9:45.80:239,0,46	1/1:1,9:9:11.40:170,11,0	1/1:1,0:1:2.96:19,3,0	0/1:12,4:15:74.10:329,0,74	0/1:9,4:13:45.31:215,0,45	0/1:13,8:19:26.79:433,0,27	1/1:1,3:4:6.02:108,6,0
chr10	38815133	.	T	TA	1257.71	PASS	AB=0.923;AC=12;AF=0.214;AN=56;BaseQRankSum=-8.437;DP=395;FS=1.243;HRun=9;HaplotypeScore=39.1508;InbreedingCoeff=0.7572;MQ=69.17;MQ0=0;MQRankSum=0.469;QD=17.23;ReadPosRankSum=1.570;VQSLOD=3.3382;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:76.29:0,76,806	0/0:6,0:6:18:0,18,156	0/1:9,0:5:3.96:4,0,20	0/1:9,2:7:16.27:31,0,16	0/0:22,0:22:56.01:0,56,471	1/1:5,21:26:60.16:664,60,0	1/1:1,5:6:15.04:166,15,0	0/0:27,0:27:59.94:0,60,513	0/0:7,0:7:21:0,21,182	0/0:17,0:17:44.21:0,44,371	0/0:23,0:23:59.96:0,60,517	1/1:3,5:8:15.04:166,15,0	0/0:8,0:8:24:0,24,208	0/0:15,0:15:35.99:0,36,313	0/0:7,0:7:21:0,21,182	0/0:10,0:10:26.98:0,27,234	0/0:18,0:18:44.98:0,45,391	0/0:11,0:11:29.98:0,30,260	0/0:24,0:24:56.95:0,57,495	0/0:19,0:19:53.99:0,54,469	0/0:8,0:8:17.99:0,18,156	0/0:2,0:2:6:0,6,52	1/1:0,10:10:30.08:332,30,0	1/1:0,2:2:6.02:66,6,0	0/0:18,0:18:53.99:0,54,469	0/0:18,0:18:41.98:0,42,365	0/0:22,0:22:65.99:0,66,573	0/0:4,0:4:12:0,12,104
chr10	38817424	.	A	ACACACACG	21352.53	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-10.510;DP=520;FS=5.147;HRun=0;HaplotypeScore=107.2495;InbreedingCoeff=0.9557;MQ=56.02;MQ0=2;MQRankSum=-11.523;QD=53.92;ReadPosRankSum=4.033;VQSLOD=4.0295;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:87.13:0,87,1994	1/1:1,5:9:15.05:633,15,0	0/0:23,0:20:28.92:0,29,806	0/0:19,0:15:24.05:0,24,456	1/1:4,12:23:30.10:1262,30,0	1/1:8,17:23:42.14:1771,42,0	1/1:9,8:21:21.07:886,21,0	1/1:17,2:24:21.04:550,21,0	1/1:5,9:15:27.09:1138,27,0	0/0:20,0:20:51.18:0,51,1319	0/0:13,0:13:39.13:0,39,995	1/1:2,8:13:15.05:632,15,0	1/1:3,8:12:21.07:885,21,0	1/1:0,6:7:9.03:379,9,0	1/1:5,7:12:21.07:885,21,0	1/1:8,8:19:24.08:1010,24,0	1/1:4,13:22:27.09:1138,27,0	0/0:12,0:12:30.09:0,30,733	1/1:9,10:26:47.97:1355,48,0	1/1:12,10:22:30.01:1058,30,0	1/1:6,4:22:9.03:380,9,0	1/1:2,7:10:15.05:632,15,0	1/1:3,8:15:14.67:570,15,0	1/1:9,4:16:15.05:632,15,0	1/1:1,13:16:33.11:1392,33,0	1/1:9,14:29:56.99:1766,57,0	1/1:4,9:22:24.08:1004,24,0	1/1:0,12:13:33.11:1393,33,0
chr10	38819882	.	C	CTT	6398.54	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-2.208;DP=326;FS=1.537;HRun=7;HaplotypeScore=45.0090;InbreedingCoeff=0.9236;MQ=72.99;MQ0=2;MQRankSum=-0.815;QD=31.68;ReadPosRankSum=1.318;VQSLOD=4.3278;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:26:62.26:0,62,714	1/1:2,3:5:9.03:148,9,0	0/0:8,0:5:8.72:0,9,69	0/0:9,0:8:23.72:0,24,224	1/1:2,12:14:30.06:447,30,0	0/0:20,0:19:54.16:0,54,628	0/0:6,0:6:14.98:0,15,132	1/1:3,24:26:69.17:1006,69,0	1/1:0,7:7:12.04:197,12,0	0/0:10,0:10:26.85:0,27,284	0/0:12,0:12:32.68:0,33,359	0/0:6,0:6:18.02:0,18,188	1/1:1,8:9:12.04:197,12,0	1/1:0,9:10:12.04:197,12,0	1/1:0,5:5:15.05:246,15,0	1/1:2,7:9:12.04:197,12,0	1/1:4,18:22:39.13:640,39,0	0/0:19,0:18:54.12:0,54,604	1/1:4,10:14:30.05:396,30,0	1/1:3,5:8:17.98:219,18,0	1/1:1,6:7:12.04:197,12,0	1/1:0,3:3:8.94:89,9,0	0/0:6,0:6:15.01:0,15,153	0/0:2,0:2:5.98:0,6,55	1/1:3,16:19:42.14:684,42,0	1/1:4,14:18:13.15:604,13,0	1/1:1,9:10:21.07:344,21,0	1/1:0,15:15:36.12:591,36,0
chr10	38820615	.	G	GA	4117.49	PASS	AB=0.964;AC=20;AF=0.357;AN=56;BaseQRankSum=-9.429;DP=632;FS=1.633;HRun=10;HaplotypeScore=65.7415;InbreedingCoeff=0.8396;MQ=67.46;MQ0=1;MQRankSum=1.485;QD=17.23;ReadPosRankSum=1.475;VQSLOD=4.2882;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,3:33:45.87:0,46,571	1/1:2,7:9:18.05:192,18,0	0/0:11,0:9:10.38:0,10,99	0/0:19,0:20:23.44:0,23,229	1/1:7,16:24:44.92:441,45,0	0/0:32,1:33:47.73:0,48,577	0/0:21,0:21:43.97:0,44,349	0/0:29,0:30:73.72:0,74,583	1/1:4,15:18:45.11:480,45,0	0/1:24,2:26:5.78:6,0,319	0/1:20,0:20:9.67:10,0,246	0/0:22,0:22:35.90:0,36,292	1/1:9,16:25:17.46:391,17,0	1/1:6,10:16:5.43:263,5,0	1/1:8,32:40:62.58:863,63,0	1/1:0,22:22:54.14:576,54,0	1/1:2,22:24:54.14:576,54,0	0/0:24,0:25:61.52:0,62,479	0/0:22,0:22:38.90:0,39,318	0/0:24,0:25:58.91:0,59,474	0/0:17,0:17:35.95:0,36,296	1/1:3,11:14:30.08:320,30,0	0/0:30,1:31:43.79:0,44,558	0/0:20,0:20:47.87:0,48,388	0/0:17,0:18:40.95:0,41,326	0/0:19,0:19:39.41:0,39,305	0/0:28,1:29:39.84:0,40,524	0/0:16,0:17:40.98:0,41,326
chr10	38821904	.	A	AGT	34.12	PASS	AC=2;AF=0.042;AN=48;BaseQRankSum=-2.442;DP=346;FS=3.021;HRun=0;HaplotypeScore=40.2759;InbreedingCoeff=0.7255;MQ=63.56;MQ0=2;MQRankSum=-0.652;QD=4.87;ReadPosRankSum=-0.465;VQSLOD=1.9902;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:66.18:0,66,1023	0/0:9,0:9:27.09:0,27,438	0/0:12,0:7:17.73:0,18,238	0/0:10,0:9:17.31:0,17,238	0/0:24,0:24:72.22:0,72,1147	1/1:0,6:7:6.02:114,6,0	./.	0/0:29,0:29:84.26:0,84,1306	0/0:8,0:8:24.08:0,24,391	0/0:11,0:11:33.11:0,33,538	0/0:15,0:15:45.15:0,45,732	./.	0/0:8,0:8:24.08:0,24,389	0/0:7,0:7:21.07:0,21,336	0/0:12,0:12:36.11:0,36,563	0/0:3,0:3:9.03:0,9,147	0/0:19,0:19:51.17:0,51,832	0/0:16,0:16:45.15:0,45,727	0/0:21,0:20:57.19:0,57,928	0/0:16,0:16:48.16:0,48,783	0/0:8,0:8:24.08:0,24,391	0/0:2,0:2:6.02:0,6,98	./.	./.	0/0:12,0:12:36.09:0,36,559	0/0:22,0:22:66.21:0,66,1052	0/0:19,0:18:57.19:0,57,925	0/0:23,0:23:69.24:0,69,1124
chr10	38822405	.	T	TAA	663.73	PASS	AB=1.000;AC=23;AF=0.639;AN=36;BaseQRankSum=-1.486;DP=191;FS=0.929;HRun=0;HaplotypeScore=36.8507;InbreedingCoeff=0.3967;MQ=58.81;MQ0=59;MQRankSum=4.991;QD=10.54;ReadPosRankSum=-1.565;VQSLOD=2.9434;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:33:86.75:0,87,1105	1/1:1,0:1:2.98:22,3,0	0/0:19,0:5:9.45:0,9,102	0/1:15,0:8:28.42:28,0,54	./.	./.	./.	1/1:6,0:3:6.02:90,6,0	./.	0/0:11,0:11:27.05:0,27,332	0/0:14,0:13:33.20:0,33,393	./.	1/1:1,0:1:3.01:44,3,0	./.	1/1:3,0:2:6.01:69,6,0	0/1:5,0:3:3.58:85,0,4	1/1:8,0:2:6.02:83,6,0	0/0:22,0:17:40.30:0,40,495	1/1:2,0:2:3.01:53,3,0	1/1:4,4:4:9.03:108,9,0	1/1:4,0:2:3.01:44,3,0	./.	./.	./.	1/1:2,0:1:3:26,3,0	0/1:3,0:2:37.12:37,0,40	1/1:5,0:3:9.02:112,9,0	./.
chr10	38822990	.	TCTCC	T	12960.56	PASS	AC=34;AF=0.739;AN=46;BaseQRankSum=9.418;DP=469;FS=2.445;HRun=0;HaplotypeScore=102.6132;InbreedingCoeff=0.9881;MQ=71.29;MQ0=1;MQRankSum=-4.911;QD=36.51;ReadPosRankSum=3.490;VQSLOD=5.2157;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,102,2480	1/1:0,6:6:15.05:256,15,0	0/0:24,0:23:26.92:0,27,653	0/0:14,0:13:23.87:0,24,517	1/1:4,21:25:63.10:979,63,0	./.	./.	1/1:11,19:29:54.16:863,54,0	1/1:5,33:38:90.31:1534,90,0	0/0:13,0:13:33.11:0,33,801	0/0:14,0:14:36.12:0,36,892	./.	1/1:3,16:19:39.13:665,39,0	1/1:3,12:15:24.08:408,24,0	1/1:3,13:16:30.10:512,30,0	1/1:3,17:20:42.14:716,42,0	1/1:5,21:26:51.17:870,51,0	0/0:5,0:5:12.04:0,12,252	1/1:4,15:19:48.15:793,48,0	1/1:4,28:32:72.14:1135,72,0	1/1:1,22:23:57.67:971,58,0	1/1:4,12:16:27.09:459,27,0	./.	./.	1/1:4,14:18:39.13:664,39,0	1/1:2,12:14:36.12:614,36,0	1/1:3,22:25:63.21:1060,63,0	1/1:3,10:13:27.09:461,27,0
chr10	38824456	.	GGTGTGTGTGTGTGTGTGTGTGTGT	G	5233.66	PASS	AB=0.739;AC=29;AF=0.537;AN=54;BaseQRankSum=7.932;DP=454;FS=26.435;HRun=0;HaplotypeScore=259.9820;InbreedingCoeff=0.2097;MQ=64.36;MQ0=14;MQRankSum=-4.007;QD=18.89;ReadPosRankSum=-1.369;VQSLOD=2.2719;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:27:16.70:0,17,1367	1/1:7,0:7:3.01:34,3,0	0/0:25,0:13:0.47:0,0,1	0/0:28,0:13:6.02:0,6,139	0/0:7,0:12:2.18:0,2,63	1/1:15,0:24:6.02:255,6,0	0/0:14,0:14:2.99:0,3,24	0/1:18,5:22:28.52:153,0,29	0/1:10,0:14:73.46:247,0,73	0/0:15,0:22:48.16:0,48,3381	0/0:8,0:10:12.04:0,12,768	0/1:10,0:15:38.51:39,0,152	1/1:4,0:7:9.03:262,9,0	1/1:11,0:20:9.03:302,9,0	0/0:10,0:9:3.01:0,3,43	1/1:4,0:8:5.70:174,6,0	0/1:10,0:16:92.41:145,0,92	0/0:11,0:16:24.08:0,24,1604	1/1:9,4:12:12.04:675,12,0	1/1:9,10:19:7.84:264,8,0	1/1:21,0:21:3.01:75,3,0	0/1:3,0:7:15.94:166,0,16	1/1:8,0:10:3.01:70,3,0	./.	1/1:8,8:17:6.02:235,6,0	0/1:16,8:24:99:1025,0,215	1/1:8,4:12:6.02:376,6,0	0/1:10,4:13:3.94:737,0,4
chr10	38827053	.	C	CT	484.66	PASS	AB=0.858;AC=7;AF=0.125;AN=56;BaseQRankSum=-4.807;DP=485;FS=19.607;HRun=11;HaplotypeScore=56.7899;InbreedingCoeff=0.5989;MQ=73.17;MQ0=0;MQRankSum=0.464;QD=7.57;ReadPosRankSum=-1.484;VQSLOD=0.1871;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:36:70.56:0,71,642	0/0:8,0:8:17.91:0,18,137	0/0:19,0:18:20.17:0,20,141	0/1:6,0:5:0:0,0,0	0/0:26,0:26:43.52:0,44,485	0/0:13,0:13:35.86:0,36,278	0/0:9,0:10:22.93:0,23,168	0/0:34,1:36:47.21:0,47,544	0/0:8,0:8:17.92:0,18,139	0/0:18,1:19:20.35:0,20,341	0/0:27,0:29:48.31:0,48,359	0/1:5,8:13:1.99:162,0,2	0/0:10,1:12:4.48:0,4,208	0/0:10,0:10:17.87:0,18,135	0/0:12,0:12:14.88:0,15,116	0/0:14,0:14:29.83:0,30,232	0/0:30,0:31:85.70:0,86,654	0/0:13,0:13:32.87:0,33,255	0/0:23,0:23:41.78:0,42,323	0/0:19,0:19:50.79:0,51,395	0/0:12,0:12:32.10:0,32,239	0/0:13,0:13:23.87:0,24,186	1/1:3,11:14:3.82:220,4,0	1/1:3,7:10:21.04:213,21,0	0/1:20,1:21:12.97:13,0,277	0/0:21,1:24:27.41:0,27,376	0/0:25,0:26:58.71:0,59,440	0/0:8,0:8:20.90:0,21,162
chr10	38827213	.	G	GT	2002.94	PASS	AB=0.800;AC=28;AF=0.500;AN=56;BaseQRankSum=-5.822;DP=396;FS=3.663;HRun=12;HaplotypeScore=64.8765;InbreedingCoeff=0.3689;MQ=93.18;MQ0=3;MQRankSum=2.051;QD=7.92;ReadPosRankSum=3.560;VQSLOD=2.6075;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:22,3:26:22.91:23,0,332	1/1:0,1:1:3:29,3,0	0/1:40,0:27:4.72:5,0,103	0/1:39,0:21:9.96:10,0,69	0/1:8,7:16:9.59:201,0,10	1/1:5,10:16:4.98:197,5,0	0/1:7,5:12:37.51:122,0,38	0/0:21,0:22:46.71:0,47,332	1/1:1,1:2:6.01:58,6,0	0/0:6,0:7:19.93:0,20,137	1/1:4,12:16:14.11:288,14,0	1/1:2,1:10:17.21:100,17,0	1/1:4,9:13:5.14:211,5,0	1/1:1,7:8:2.33:130,2,0	0/1:1,7:8:0.87:154,0,1	1/1:2,9:11:27.04:262,27,0	0/1:6,13:19:10.72:230,0,11	0/0:17,0:19:32.78:0,33,205	0/0:21,0:22:45.38:0,45,305	0/0:6,0:7:11.90:0,12,86	0/0:2,0:2:5.97:0,6,44	0/1:3,0:3:15.90:23,0,16	1/1:0,1:7:14.48:91,14,0	1/1:1,0:5:11.36:57,11,0	0/0:14,0:15:23.99:0,24,234	0/0:16,0:17:46.58:0,47,324	0/0:22,0:22:18.44:0,18,297	0/0:10,0:10:29.81:0,30,216
chr10	38828740	.	CT	C	2543.78	PASS	AB=0.842;AC=19;AF=0.339;AN=56;BaseQRankSum=5.083;DP=588;FS=7.040;HRun=12;HaplotypeScore=69.4213;InbreedingCoeff=0.7704;MQ=65.20;MQ0=0;MQRankSum=1.176;QD=12.35;ReadPosRankSum=3.564;VQSLOD=3.5505;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,2:30:39.87:0,40,573	1/1:2,7:9:17.92:139,18,0	0/1:16,0:11:9.71:17,0,10	0/1:8,0:7:16.25:16,0,20	1/1:7,29:36:77.66:603,78,0	0/0:9,0:28:59.97:0,60,337	0/0:2,0:17:33.93:0,34,167	0/0:25,0:25:39.06:0,39,385	1/1:2,17:20:52.84:400,53,0	0/0:38,0:38:90.15:0,90,899	0/0:18,0:18:39.07:0,39,391	0/0:3,0:16:28.31:0,28,141	1/1:4,15:19:35.82:276,36,0	1/1:2,11:13:23.90:186,24,0	1/1:6,20:25:17.43:318,17,0	1/1:2,10:12:20.90:163,21,0	1/1:7,29:36:71.65:557,72,0	0/0:18,0:18:42.04:0,42,411	0/0:15,0:16:32.83:0,33,299	0/0:25,0:28:41.64:0,42,527	0/0:15,0:15:39.05:0,39,380	0/1:4,6:10:15.54:78,0,16	0/0:3,0:20:34.09:0,34,172	0/0:9,0:18:25.89:0,26,168	0/0:23,0:23:54.11:0,54,548	0/0:20,1:21:27.86:0,28,464	0/0:36,0:36:90.01:0,90,896	0/0:14,0:14:24.97:0,25,263
chr10	38829243	.	G	GC	17742.35	PASS	AB=0.711;AC=44;AF=0.786;AN=56;BaseQRankSum=-12.552;DP=552;FS=1.757;HRun=1;HaplotypeScore=50.6291;InbreedingCoeff=0.7818;MQ=83.59;MQ0=0;MQRankSum=-5.041;QD=39.25;ReadPosRankSum=2.967;VQSLOD=5.3747;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:51.17:0,51,661	1/1:0,9:9:23.88:359,24,0	0/0:18,0:18:51.14:0,51,620	0/0:22,0:22:54.13:0,54,664	1/1:0,26:26:72.24:1078,72,0	1/1:0,15:15:42.14:629,42,0	1/1:0,19:19:51.17:764,51,0	1/1:1,24:25:72.23:1055,72,0	1/1:0,20:20:60.20:899,60,0	0/0:24,0:24:72.23:0,72,935	0/0:18,0:18:51.16:0,51,649	1/1:0,11:11:33.11:495,33,0	1/1:1,22:23:54.65:809,55,0	1/1:0,20:20:48.16:719,48,0	1/1:0,25:25:63.21:944,63,0	1/1:1,20:21:57.11:826,57,0	1/1:0,16:16:45.15:674,45,0	0/1:12,2:14:47.82:48,0,408	1/1:0,13:13:39.13:584,39,0	1/1:0,25:25:72.24:1078,72,0	1/1:1,32:33:90.30:1348,90,0	1/1:0,11:11:30.10:449,30,0	1/1:0,21:21:57.19:854,57,0	1/1:0,24:24:72.24:1079,72,0	1/1:1,13:14:33.11:494,33,0	0/1:6,29:35:50.33:1255,0,50	1/1:0,28:28:75.16:1121,75,0	1/1:0,4:4:12.04:180,12,0
chr10	38830652	.	GGT	G	3473.18	PASS	AB=0.854;AC=23;AF=0.411;AN=56;BaseQRankSum=6.524;DP=663;FS=13.143;HRun=0;HaplotypeScore=87.6848;InbreedingCoeff=0.3619;MQ=66.06;MQ0=7;MQRankSum=1.325;QD=9.62;ReadPosRankSum=-0.895;VQSLOD=2.3481;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:28.79:0,29,750	0/0:11,0:12:21.07:0,21,320	0/0:46,0:20:6.02:0,6,80	0/0:35,0:19:12.51:0,13,187	0/1:28,4:32:84.59:85,0,826	0/0:11,0:24:30.02:0,30,322	0/0:14,0:25:33.01:0,33,328	0/1:18,12:29:7.95:348,0,8	0/0:27,0:27:60.17:0,60,891	0/0:26,1:27:22.18:0,22,801	0/1:12,0:13:5.54:6,0,373	0/0:10,0:15:27.02:0,27,310	0/1:19,1:22:3.13:3,0,697	0/0:25,0:25:15.93:0,16,566	0/0:22,0:22:51.17:0,51,795	0/1:27,4:31:90.24:90,0,909	0/1:22,4:25:50.85:51,0,617	0/1:3,3:6:37.99:61,0,38	1/1:9,11:18:24.06:269,24,0	1/1:4,20:24:59.93:648,60,0	1/1:12,22:34:36.07:405,36,0	0/1:19,3:23:41.83:42,0,717	0/0:2,0:16:20.69:0,21,204	0/1:12,1:29:24.69:25,0,318	1/1:7,5:13:20.72:203,21,0	1/1:6,15:22:47.91:513,48,0	1/1:6,10:16:39.11:446,39,0	1/1:6,11:17:24.07:280,24,0
chr10	38830772	.	AT	A	7868.24	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=8.726;DP=573;FS=9.718;HRun=10;HaplotypeScore=60.7138;InbreedingCoeff=0.9706;MQ=70.51;MQ0=1;MQRankSum=-1.556;QD=19.97;ReadPosRankSum=1.253;VQSLOD=5.5041;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,113,1230	1/1:1,7:8:20.99:182,21,0	0/0:11,0:9:16.32:0,16,117	0/0:14,0:12:20.49:0,20,172	1/1:2,25:27:68.95:598,69,0	1/1:3,11:15:29.03:240,29,0	1/1:7,15:22:38.97:339,39,0	1/1:5,24:29:74.02:631,74,0	1/1:2,17:19:44.99:391,45,0	0/0:23,0:23:57.15:0,57,630	0/0:27,0:27:69.19:0,69,763	0/0:17,0:17:45.12:0,45,497	1/1:1,9:10:26.99:234,27,0	1/1:4,19:23:56.98:495,57,0	1/1:0,18:18:44.99:391,45,0	1/1:2,21:23:59.98:521,60,0	1/1:3,24:27:59.44:541,59,0	0/0:13,0:12:30.08:0,30,332	1/1:8,15:22:12.87:338,13,0	1/1:2,30:32:89.98:781,90,0	1/1:5,10:15:23.53:208,24,0	1/1:4,12:17:4.84:259,5,0	0/0:20,0:20:42.11:0,42,464	0/0:11,0:11:30.08:0,30,331	1/1:1,9:10:17.98:156,18,0	1/1:6,20:26:59.97:521,60,0	1/1:2,29:31:83.98:729,84,0	1/1:6,12:18:35.99:313,36,0
chr10	38831290	.	AT	A	5224.92	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=12.608;DP=637;FS=0.685;HRun=6;HaplotypeScore=62.8948;InbreedingCoeff=0.9992;MQ=72.42;MQ0=0;MQRankSum=-3.016;QD=28.55;ReadPosRankSum=-1.283;VQSLOD=4.9349;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:54.16:0,54,695	0/0:8,0:8:21.07:0,21,276	0/0:16,0:16:45.04:0,45,530	0/0:21,1:22:37.97:0,38,684	0/0:31,0:31:90.26:0,90,1152	0/0:27,0:27:78.24:0,78,1001	0/0:31,0:31:87.27:0,87,1128	1/1:3,29:32:87.19:918,87,0	0/0:27,0:27:75.23:0,75,973	0/0:24,0:24:60.19:0,60,771	0/0:24,0:24:60.67:0,61,789	0/0:28,0:28:84.26:0,84,1087	0/0:24,0:24:69.22:0,69,906	0/0:17,0:17:48.16:0,48,630	0/0:26,0:26:78.25:0,78,1026	0/0:21,0:21:60.20:0,60,790	0/0:33,0:33:99:0,99,1287	0/0:19,0:19:51.17:0,51,670	1/1:1,15:16:45.11:484,45,0	1/1:1,22:23:63.15:676,63,0	1/1:1,18:19:45.11:484,45,0	0/0:16,0:16:48.16:0,48,632	0/0:23,0:23:63.19:0,63,813	0/0:16,0:16:42.14:0,42,553	1/1:2,20:22:51.13:548,51,0	1/1:1,21:22:63.13:665,63,0	1/1:2,34:36:99:1096,102,0	1/1:0,13:13:33.08:354,33,0
chr10	38834316	.	TAAAC	T	11112.08	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=14.245;DP=594;FS=6.042;HRun=0;HaplotypeScore=99.0401;InbreedingCoeff=0.9801;MQ=70.43;MQ0=1;MQRankSum=-0.675;QD=30.44;ReadPosRankSum=3.287;VQSLOD=4.3830;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:39.13:0,39,834	1/1:7,6:13:18.06:295,18,0	0/0:19,0:16:12:0,12,192	0/0:18,0:18:27.09:0,27,586	1/1:7,36:43:99:1507,99,0	0/0:16,0:16:42.14:0,42,954	0/0:17,0:17:42.13:0,42,911	1/1:7,13:20:39.06:543,39,0	1/1:4,10:15:30.10:491,30,0	0/0:36,1:37:35.14:0,35,1803	0/0:30,0:30:69.24:0,69,1635	0/0:14,0:14:33.11:0,33,801	1/1:6,6:12:24.08:392,24,0	1/1:2,8:10:12.04:196,12,0	1/1:5,19:24:48.16:786,48,0	1/1:6,12:18:33.04:509,33,0	1/1:5,13:18:36.12:589,36,0	0/0:11,0:11:27.09:0,27,590	1/1:5,8:13:24.08:387,24,0	1/1:13,25:38:66.22:1067,66,0	1/1:7,5:12:9.03:147,9,0	1/1:3,15:18:41.97:623,42,0	0/0:23,0:23:51.14:0,51,1137	0/0:22,0:22:52.42:0,52,1213	1/1:2,25:27:54.18:884,54,0	1/1:10,28:38:84.29:1368,84,0	1/1:8,26:34:59.88:982,60,0	1/1:0,12:12:21.07:344,21,0
chr10	38835168	.	A	AGTGT	3491.16	PASS	AB=0.792;AC=37;AF=0.771;AN=48;BaseQRankSum=-2.015;DP=571;FS=0.000;HRun=0;HaplotypeScore=118.4456;InbreedingCoeff=0.1619;MQ=63.98;MQ0=3;MQRankSum=0.662;QD=7.35;ReadPosRankSum=2.119;VQSLOD=2.4375;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:27:10.87:72,11,0	./.	./.	./.	0/0:20,0:21:25.48:0,25,293	1/1:9,0:19:5.75:64,6,0	1/1:15,2:26:17.53:288,18,0	0/1:27,0:27:0.98:46,0,1	1/1:13,7:21:11.78:225,12,0	1/1:22,0:21:11.39:102,11,0	1/1:13,0:20:5.49:24,5,0	1/1:20,0:20:11.88:188,12,0	1/1:16,4:21:9.50:202,10,0	0/1:15,3:19:16.11:140,0,16	1/1:13,6:22:12.04:283,12,0	1/1:10,13:25:32.54:662,33,0	0/1:16,12:31:70.46:321,0,70	0/1:14,0:21:28.99:29,0,93	1/1:11,1:13:5.75:83,6,0	0/1:14,0:18:3.86:4,0,43	1/1:27,0:31:21.90:140,22,0	1/1:12,7:19:11.80:282,12,0	./.	1/1:10,2:18:8.12:193,8,0	0/0:19,0:20:8.60:0,9,265	0/1:18,0:25:0.55:45,0,1	0/1:14,0:24:73.40:86,0,73	1/1:2,0:3:2.74:12,3,0
chr10	38837741	.	C	CAAACA	21409.13	PASS	AB=1.000;AC=41;AF=0.732;AN=56;BaseQRankSum=-11.305;DP=786;FS=0.875;HRun=0;HaplotypeScore=126.3722;InbreedingCoeff=0.8574;MQ=69.70;MQ0=3;MQRankSum=0.171;QD=35.62;ReadPosRankSum=2.810;VQSLOD=4.9997;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:63.21:0,63,1041	1/1:3,9:13:19.53:595,20,0	0/0:30,0:22:2.07:0,2,189	0/1:53,0:40:18.37:18,0,275	1/1:14,17:34:57.11:1356,57,0	0/0:23,0:23:42.14:0,42,735	0/0:24,0:24:16.29:0,16,354	1/1:21,0:31:35.84:499,36,0	1/1:15,11:27:24.08:682,24,0	0/0:31,0:31:51.15:0,51,844	0/0:28,0:28:63.21:0,63,1119	1/1:10,12:25:30.10:853,30,0	1/1:9,17:27:45.15:1279,45,0	1/1:7,10:18:24.08:683,24,0	1/1:4,13:17:18.06:512,18,0	1/1:3,14:21:30.10:853,30,0	1/1:9,31:41:69.24:1919,69,0	0/0:16,0:16:24.08:0,24,421	1/1:6,16:23:54.11:1212,54,0	1/1:18,25:45:72.25:1902,72,0	1/1:17,13:30:33.11:923,33,0	1/1:16,14:34:42.14:1106,42,0	1/1:10,14:24:36.59:1020,37,0	1/1:7,22:30:48.16:1321,48,0	1/1:3,3:26:30.10:654,30,0	1/1:16,23:41:22.95:1891,23,0	1/1:12,24:36:66.23:1874,66,0	1/1:0,4:4:9.03:256,9,0
chr10	38839627	.	C	CT	2386.51	PASS	AB=0.790;AC=36;AF=0.692;AN=52;BaseQRankSum=-2.344;DP=346;FS=0.599;HRun=14;HaplotypeScore=49.0616;InbreedingCoeff=0.3352;MQ=72.03;MQ0=3;MQRankSum=0.560;QD=8.97;ReadPosRankSum=-0.451;VQSLOD=2.2544;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,1:19:17.87:0,18,236	1/1:2,4:6:11.64:105,12,0	0/0:10,0:8:10.94:0,11,52	0/0:15,0:10:7.86:0,8,42	0/1:13,10:25:3.48:185,0,3	0/1:9,9:18:28.85:124,0,29	1/1:5,6:10:15.47:132,15,0	1/1:10,11:22:31.29:228,31,0	1/1:4,2:6:7.77:50,8,0	0/0:16,0:16:28.06:0,28,177	0/1:14,0:14:12.15:12,0,62	1/1:3,1:3:6.88:52,7,0	1/1:4,3:9:15.93:111,16,0	1/1:5,3:7:17.84:139,18,0	1/1:4,5:9:3.26:49,3,0	1/1:7,6:13:17.95:151,18,0	1/1:7,18:27:38.39:318,38,0	0/0:13,0:14:3.65:0,4,109	0/1:5,2:7:7.30:60,0,7	0/1:7,1:9:21:41,0,21	0/1:6,2:8:7.44:52,0,7	./.	./.	1/1:6,7:13:20.99:185,21,0	1/1:3,10:15:8.01:87,8,0	1/1:9,9:19:6.80:160,7,0	1/1:5,8:13:1.74:139,2,0	1/1:2,7:10:7.56:176,8,0
chr10	38839817	.	GT	G	4566.24	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-0.193;DP=323;FS=2.963;HRun=10;HaplotypeScore=41.5592;InbreedingCoeff=0.9587;MQ=76.79;MQ0=0;MQRankSum=0.007;QD=21.95;ReadPosRankSum=2.182;VQSLOD=5.6417;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:30.08:0,30,332	1/1:2,7:9:18:156,18,0	0/0:18,0:16:27.77:0,28,229	0/0:8,0:8:17.96:0,18,187	1/1:0,11:11:29.99:260,30,0	0/0:8,0:8:21.05:0,21,225	0/0:7,0:7:18.05:0,18,199	1/1:4,26:30:74.95:645,75,0	1/1:0,9:9:26.99:234,27,0	0/0:12,1:13:10.03:0,10,326	0/0:15,0:15:39.11:0,39,431	0/0:2,0:11:22.88:0,23,126	1/1:2,6:8:20.98:181,21,0	1/1:0,8:8:21:182,21,0	1/1:0,13:13:35.99:312,36,0	1/1:0,9:9:24:208,24,0	1/1:1,11:12:26.99:234,27,0	0/0:12,0:12:29.75:0,30,309	1/1:2,10:12:29.99:260,30,0	1/1:1,13:14:35.88:303,36,0	1/1:1,7:8:17.99:156,18,0	1/1:0,2:2:6:52,6,0	0/0:1,0:3:8.69:0,9,62	0/0:0,0:6:17.04:0,17,85	1/1:2,15:17:41.99:365,42,0	1/1:2,12:14:35.99:312,36,0	1/1:2,23:25:62.98:547,63,0	1/1:0,7:7:17.99:156,18,0
chr10	38839979	.	G	GA	7666.33	PASS	AB=0.633;AC=41;AF=0.732;AN=56;BaseQRankSum=-4.094;DP=448;FS=2.191;HRun=10;HaplotypeScore=56.3824;InbreedingCoeff=0.6813;MQ=67.38;MQ0=3;MQRankSum=0.877;QD=21.66;ReadPosRankSum=2.056;VQSLOD=5.8954;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:68.90:0,69,565	1/1:1,2:3:6.02:64,6,0	0/0:18,1:11:26.25:0,26,225	0/0:16,0:7:11.74:0,12,74	1/1:5,17:23:53.83:529,54,0	1/1:1,19:21:50.96:526,51,0	1/1:4,13:18:39.09:410,39,0	1/1:5,19:24:54.07:553,54,0	1/1:1,12:13:33.08:352,33,0	0/0:10,0:11:32:0,32,252	0/0:10,0:10:20.96:0,21,172	0/1:6,5:11:43.87:180,0,44	1/1:1,7:8:18.05:192,18,0	1/1:1,13:14:36.09:383,36,0	1/1:2,9:11:23.96:239,24,0	1/1:1,8:10:23.89:238,24,0	1/1:6,15:23:19.78:480,20,0	0/0:11,0:11:23.94:0,24,196	1/1:3,18:21:54.10:562,54,0	1/1:5,14:19:14.45:359,14,0	1/1:4,12:16:42.07:430,42,0	0/1:2,10:12:13.16:284,0,13	1/1:3,7:10:22.30:224,22,0	1/1:4,24:29:22.98:623,23,0	1/1:2,13:15:8.40:283,8,0	0/1:10,10:20:34.56:253,0,35	1/1:6,18:23:20.18:405,20,0	1/1:1,8:9:9.02:96,9,0
chr10	38841298	.	T	TA	17389.14	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=7.065;DP=664;FS=7.812;HRun=0;HaplotypeScore=97.3753;InbreedingCoeff=0.9955;MQ=86.04;MQ0=0;MQRankSum=-5.942;QD=43.26;ReadPosRankSum=1.569;VQSLOD=4.8089;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:81.27:0,81,1130	1/1:0,4:4:12.04:192,12,0	0/0:19,0:19:56.96:0,57,714	0/0:34,0:34:95.87:0,96,1152	1/1:3,32:36:96.24:1489,96,0	0/0:21,0:21:60.17:0,60,803	0/0:21,0:21:60.19:0,60,820	1/1:1,35:36:99:1552,102,0	1/1:2,27:29:75.26:1188,75,0	0/0:28,0:28:84.27:0,84,1146	0/0:31,0:31:87.29:0,87,1212	0/0:25,0:25:75.21:0,75,1012	1/1:0,21:22:54.18:849,54,0	1/1:1,21:22:57.19:898,57,0	1/1:1,24:25:66.23:1054,66,0	1/1:0,23:23:66.23:1054,66,0	1/1:1,13:14:39.13:623,39,0	0/0:10,0:10:30.10:0,30,416	1/1:2,23:25:75.16:1079,75,0	1/1:0,26:26:69.24:1102,69,0	1/1:0,28:28:78.27:1246,78,0	1/1:2,20:24:69.23:1069,69,0	0/0:22,0:22:63.21:0,63,879	0/0:23,0:23:66.21:0,66,907	1/1:0,13:13:36.12:575,36,0	1/1:0,26:26:78.25:1217,78,0	1/1:1,27:27:75.26:1197,75,0	1/1:0,21:21:63.21:1006,63,0
chr10	38842767	.	GGAA	G	5040.12	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=11.907;DP=611;FS=6.052;HRun=0;HaplotypeScore=92.1200;InbreedingCoeff=0.9916;MQ=64.96;MQ0=1;MQRankSum=-0.849;QD=29.65;ReadPosRankSum=-0.129;VQSLOD=4.6088;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,108,2221	0/0:7,0:7:18.06:0,18,386	0/0:29,0:19:11.34:0,11,520	0/0:43,0:24:42.68:0,43,733	0/0:21,0:21:60.21:0,60,1263	0/0:21,0:21:60.19:0,60,1241	0/0:19,0:19:48.14:0,48,925	1/1:7,19:26:57.16:814,57,0	0/0:19,0:19:45.15:0,45,936	0/0:16,0:16:45.15:0,45,959	0/0:17,0:17:42.10:0,42,855	0/0:18,0:18:54.19:0,54,1158	0/0:19,0:19:51.17:0,51,1076	0/0:11,0:11:33.07:0,33,613	0/0:24,0:24:66.21:0,66,1358	0/0:17,0:17:42.12:0,42,808	0/0:27,0:27:66.69:0,67,1363	0/0:14,0:14:39.10:0,39,750	1/1:2,13:15:42.03:495,42,0	1/1:4,20:24:53.97:716,54,0	1/1:6,26:32:57.19:870,57,0	0/0:21,0:21:60.15:0,60,1177	0/0:13,0:13:36.11:0,36,733	0/0:24,0:24:58.43:0,58,1162	0/0:19,0:19:57.11:0,57,1083	1/1:5,27:32:28.91:1126,29,0	1/1:6,20:26:39.03:602,39,0	1/1:1,14:15:27.09:417,27,0
chr10	38843048	.	AAAC	A	4827.20	PASS	AB=1.000;AC=40;AF=0.714;AN=56;BaseQRankSum=7.779;DP=594;FS=3.628;HRun=0;HaplotypeScore=101.5588;InbreedingCoeff=0.3096;MQ=54.14;MQ0=17;MQRankSum=-2.744;QD=10.12;ReadPosRankSum=-0.693;VQSLOD=3.8381;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:89.77:0,90,1387	0/1:8,0:7:1.59:47,0,2	0/1:47,0:13:12.83:13,0,93	0/1:32,0:10:14.16:14,0,15	1/1:29,0:27:43.75:327,44,0	0/1:16,0:19:11.64:38,0,12	1/1:6,0:7:9.49:63,9,0	1/1:25,7:28:66.05:560,66,0	1/1:17,0:17:11.36:77,11,0	0/0:31,0:31:45.43:0,45,891	0/0:16,0:14:19.56:0,20,427	0/1:17,0:17:17.56:102,0,18	1/1:16,0:15:9.24:56,9,0	1/1:10,0:10:19.08:119,19,0	1/1:11,0:11:8.32:38,8,0	1/1:11,0:10:6.11:166,6,0	1/1:30,0:29:4.69:284,5,0	0/0:34,0:33:84.20:0,84,1299	1/1:9,15:23:24.79:367,25,0	1/1:18,12:30:72.11:771,72,0	1/1:8,2:8:15.61:139,16,0	0/1:16,0:15:1.66:188,0,2	0/1:18,0:17:22.93:91,0,23	0/1:14,0:13:18.50:80,0,19	1/1:20,1:18:23.98:233,24,0	1/1:8,17:24:19.43:518,19,0	1/1:4,13:17:20.77:236,21,0	1/1:5,11:14:23.81:300,24,0
chr10	38843049	.	AAC	A	5088.72	PASS	AB=1.000;AC=41;AF=0.732;AN=56;BaseQRankSum=9.696;DP=588;FS=3.611;HRun=0;HaplotypeScore=92.6761;InbreedingCoeff=0.7044;MQ=54.66;MQ0=15;MQRankSum=-2.156;QD=11.57;ReadPosRankSum=-0.592;VQSLOD=4.3732;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:89.23:0,89,1091	1/1:8,0:7:15.22:106,15,0	0/1:48,0:14:1.77:2,0,86	0/1:32,0:10:3.62:4,0,17	1/1:29,0:27:63.15:508,63,0	1/1:17,0:17:36.48:167,36,0	1/1:7,0:7:13.63:79,14,0	1/1:28,4:28:66.89:527,67,0	1/1:16,1:17:13.55:126,14,0	0/0:32,0:31:44.90:0,45,736	0/0:15,0:14:19.38:0,19,346	0/1:17,0:17:29.76:52,0,30	1/1:14,2:15:14.70:127,15,0	1/1:10,0:10:24.08:167,24,0	1/1:11,0:11:8.97:71,9,0	1/1:11,0:10:19.59:239,20,0	1/1:30,0:29:47.40:432,47,0	0/0:34,0:33:80.85:0,81,1042	1/1:24,0:23:23.33:323,23,0	1/1:26,3:29:76.87:664,77,0	1/1:10,0:8:7.45:100,7,0	1/1:16,0:15:18.15:264,18,0	0/0:18,0:17:7.79:0,8,61	0/0:14,0:13:1.40:0,1,40	1/1:8,12:17:24.07:301,24,0	1/1:24,0:23:30.24:406,30,0	1/1:16,1:17:20.85:196,21,0	1/1:14,1:14:23.78:227,24,0
chr10	38843050	.	AC	A	5402.34	PASS	AB=1.000;AC=41;AF=0.732;AN=56;BaseQRankSum=7.366;DP=580;FS=1.279;HRun=1;HaplotypeScore=82.7983;InbreedingCoeff=0.7708;MQ=56.02;MQ0=15;MQRankSum=-3.972;QD=12.48;ReadPosRankSum=-2.088;VQSLOD=2.8012;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:86.33:0,86,809	1/1:0,8:7:17.97:183,18,0	0/1:50,0:15:2.88:3,0,76	0/1:32,0:10:0.92:1,0,19	1/1:16,14:28:73.46:734,73,0	1/1:17,0:17:46.54:298,47,0	1/1:7,0:7:14.80:101,15,0	1/1:30,1:27:67.13:462,67,0	1/1:1,16:17:15:167,15,0	0/0:30,0:29:40.32:0,40,601	0/0:16,0:15:18.28:0,18,268	0/1:18,0:18:25.99:26,0,66	1/1:3,13:15:15.01:145,15,0	1/1:8,1:9:25.41:194,25,0	1/1:0,11:11:9.03:120,9,0	1/1:7,4:10:28.24:293,28,0	1/1:21,8:28:63.70:541,64,0	0/0:34,0:33:75.50:0,75,776	1/1:20,1:20:9.49:292,9,0	1/1:27,2:29:76.79:540,77,0	1/1:10,0:8:11.59:90,12,0	1/1:13,3:15:38.78:323,39,0	0/0:18,0:17:28.62:0,29,119	0/0:14,0:13:21.80:0,22,93	1/1:13,5:15:23.97:202,24,0	1/1:22,0:21:40.91:353,41,0	1/1:16,0:16:20.87:157,21,0	1/1:14,1:14:23.68:177,24,0
chr10	38843058	.	AAAAC	A	1074.42	PASS	AB=0.986;AC=16;AF=0.286;AN=56;BaseQRankSum=4.755;DP=608;FS=15.596;HRun=0;HaplotypeScore=125.9026;InbreedingCoeff=-0.0919;MQ=59.01;MQ0=14;MQRankSum=-2.631;QD=3.38;ReadPosRankSum=0.603;VQSLOD=1.4676;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:96.25:0,96,1948	0/0:8,0:7:14.53:0,15,98	0/1:46,0:15:0.38:0,0,223	0/0:34,0:14:0.13:0,0,113	0/1:31,0:29:99:107,0,181	0/0:18,0:18:45.04:0,45,741	0/0:11,0:11:26.77:0,27,261	0/1:35,1:32:80.69:159,0,81	0/0:18,0:17:3.27:0,3,45	0/0:35,0:34:84:0,84,1617	0/0:17,0:16:42.13:0,42,876	0/0:18,0:18:36.01:0,36,537	0/0:18,1:18:9.09:0,9,113	0/1:10,0:10:21.89:22,0,60	0/0:13,0:13:11.34:0,11,65	0/1:11,0:10:27.17:27,0,70	0/1:31,0:30:52.54:53,0,290	0/0:33,0:32:77.69:0,78,1781	0/1:26,0:25:46.86:167,0,47	0/1:31,0:31:73.66:225,0,74	1/1:8,0:7:9.02:64,9,0	0/1:15,0:14:34.80:35,0,125	0/0:19,0:18:48.05:0,48,727	0/0:13,0:13:30.10:0,30,495	0/1:19,0:16:22.59:23,0,25	0/1:22,1:22:71.57:167,0,72	0/1:15,2:17:29.94:102,0,30	1/1:14,0:13:16.40:85,16,0
chr10	38843206	.	CTT	C	14316.04	PASS	AB=0.929;AC=35;AF=0.625;AN=56;BaseQRankSum=12.194;DP=552;FS=5.912;HRun=4;HaplotypeScore=68.0363;InbreedingCoeff=0.9195;MQ=80.11;MQ0=2;MQRankSum=-3.006;QD=37.09;ReadPosRankSum=2.480;VQSLOD=4.1993;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:6:15.05:0,15,281	1/1:0,13:11:30.10:442,30,0	0/0:23,0:23:65.96:0,66,1112	0/0:5,0:5:11.37:0,11,206	1/1:0,29:29:78.26:1149,78,0	0/0:27,0:27:78.27:0,78,1453	0/0:10,0:10:27.09:0,27,506	1/1:4,30:34:90.28:1285,90,0	1/1:0,21:21:63.21:928,63,0	0/0:24,0:24:72.25:0,72,1349	0/0:10,0:10:30.10:0,30,562	0/0:21,0:21:60.17:0,60,1088	1/1:0,17:15:45.15:662,45,0	1/1:1,23:24:57.19:839,57,0	1/1:0,18:18:42.14:618,42,0	1/1:0,12:12:33.11:486,33,0	1/1:0,25:25:69.23:1016,69,0	0/1:12,1:13:11.07:11,0,526	1/1:1,26:27:81.27:1173,81,0	1/1:3,32:35:87.29:1281,87,0	1/1:0,23:23:57.19:839,57,0	1/1:3,14:17:39.13:574,39,0	0/0:22,0:22:66.20:0,66,1171	0/0:18,0:18:54.19:0,54,1001	1/1:0,17:17:45.15:663,45,0	1/1:1,24:24:16:936,16,0	1/1:1,26:26:68.94:1015,69,0	1/1:0,9:9:27.09:398,27,0
chr10	38844573	.	ACACACACACACC	A	1373.83	PASS	AB=0.966;AC=21;AF=0.375;AN=56;BaseQRankSum=2.477;DP=511;FS=0.000;HRun=0;HaplotypeScore=144.7890;InbreedingCoeff=-0.2788;MQ=45.54;MQ0=30;MQRankSum=1.943;QD=4.53;ReadPosRankSum=-1.798;VQSLOD=1.9421;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:21:39.92:0,40,846	0/1:8,0:8:9.86:10,0,289	0/0:38,0:8:13.87:0,14,145	0/0:37,0:9:3.18:0,3,117	0/1:10,0:8:36.84:61,0,37	0/1:18,0:16:19.22:28,0,19	0/1:30,0:29:99:130,0,165	0/1:18,0:16:93.41:93,0,498	0/1:17,0:17:30.88:31,0,236	0/0:13,0:12:36.06:0,36,1037	0/0:12,0:11:3.17:0,3,556	0/1:11,1:12:34.80:249,0,35	0/1:12,0:12:90.55:91,0,336	0/1:18,0:18:35.71:36,0,586	0/0:15,0:15:12.50:0,12,351	0/1:19,0:18:21.17:21,0,1077	0/1:34,0:34:99:168,0,1264	0/0:18,0:17:51.03:0,51,946	1/1:9,0:7:4.40:90,4,0	0/0:16,0:15:2.98:0,3,25	1/1:47,0:43:10.94:67,11,0	0/0:9,0:9:12.04:0,12,475	0/1:9,0:7:16.96:17,0,17	0/0:12,10:20:2.69:0,3,26	0/1:11,0:11:38.09:38,0,39	0/1:15,0:15:99:215,0,171	0/1:5,7:11:51.49:147,0,51	1/1:3,0:3:3.01:42,3,0
chr10	38844575	.	ACACACACACC	A	1966.01	PASS	AB=0.986;AC=27;AF=0.482;AN=56;BaseQRankSum=1.343;DP=492;FS=1.730;HRun=0;HaplotypeScore=128.0287;InbreedingCoeff=-0.0143;MQ=45.48;MQ0=29;MQRankSum=2.361;QD=6.05;ReadPosRankSum=-1.180;VQSLOD=2.3110;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:20:36.89:0,37,594	0/1:8,0:8:9.92:10,0,186	0/0:37,0:8:13.87:0,14,145	0/0:38,0:9:3.18:0,3,117	0/1:10,0:8:12.94:61,0,13	1/1:16,1:15:21.86:196,22,0	0/1:27,1:27:77.57:201,0,78	0/1:17,0:16:99:119,0,351	0/1:17,0:17:33.83:34,0,172	0/0:13,0:12:36.06:0,36,888	0/0:12,0:11:3.17:0,3,427	1/1:10,1:12:9.03:244,9,0	0/1:11,0:11:90.56:91,0,231	0/1:18,0:18:42.23:42,0,354	0/0:14,0:14:9.50:0,10,254	0/1:19,0:18:26.14:26,0,780	0/1:33,0:33:99:197,0,852	0/0:18,0:17:50.99:0,51,758	1/1:10,0:8:15.92:141,16,0	0/1:13,0:13:0:0,0,0	1/1:39,1:37:11.10:91,11,0	0/0:8,0:8:12.04:0,12,387	1/1:5,0:6:2.99:23,3,0	1/1:22,0:20:2.03:19,2,0	0/1:11,0:11:13.90:14,0,14	0/1:14,0:13:32.72:361,0,33	0/1:11,1:11:11.62:179,0,12	1/1:0,3:3:3.01:87,3,0
chr10	38844577	.	ACACACACC	A	1917.43	PASS	AB=0.960;AC=29;AF=0.518;AN=56;BaseQRankSum=1.489;DP=479;FS=1.727;HRun=0;HaplotypeScore=112.6359;InbreedingCoeff=0.1208;MQ=45.30;MQ0=29;MQRankSum=0.866;QD=6.48;ReadPosRankSum=0.895;VQSLOD=2.3102;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:20:33.81:0,34,413	0/1:8,0:8:35.87:36,0,96	0/0:38,0:8:13.87:0,14,145	0/0:41,0:10:6.12:0,6,137	1/1:10,0:8:8.98:73,9,0	1/1:17,0:15:15.65:192,16,0	1/1:25,1:25:13.57:283,14,0	0/1:17,0:16:99:120,0,226	0/1:16,0:16:36.80:37,0,91	0/0:13,0:12:36.05:0,36,721	0/0:12,0:11:3.15:0,3,282	1/1:10,0:10:9.03:184,9,0	0/1:11,0:11:90.59:91,0,141	0/1:18,0:18:91.91:92,0,187	0/0:13,0:13:9.50:0,10,174	0/1:18,0:18:27.34:27,0,465	0/1:33,0:33:99:239,0,454	0/0:19,0:18:46.76:0,47,584	1/1:10,0:8:16.60:141,17,0	0/1:5,6:10:0:0,0,0	1/1:39,0:35:11.18:80,11,0	0/1:9,0:9:9.86:10,0,243	1/1:7,0:5:2.99:23,3,0	0/0:21,0:19:3.55:0,4,14	1/1:9,0:11:3.45:22,3,0	0/1:10,0:10:13.81:255,0,14	0/1:11,0:10:5.43:133,0,5	1/1:3,0:3:3.01:54,3,0
chr10	38844583	.	ACC	A	2593.71	PASS	AB=1.000;AC=41;AF=0.732;AN=56;BaseQRankSum=0.708;DP=433;FS=2.026;HRun=5;HaplotypeScore=76.3515;InbreedingCoeff=0.5977;MQ=45.55;MQ0=27;MQRankSum=2.563;QD=9.57;ReadPosRankSum=1.856;VQSLOD=-0.4429;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:15:31.71:0,32,253	1/1:6,0:6:5.70:66,6,0	0/0:42,0:10:16.86:0,17,169	0/0:45,0:13:11.91:0,12,185	1/1:7,0:6:11.98:98,12,0	1/1:15,0:13:16.01:144,16,0	1/1:21,0:21:29.36:227,29,0	1/1:11,0:11:17.95:163,18,0	1/1:4,9:13:9:91,9,0	0/0:13,0:12:22.36:0,22,277	0/1:11,0:10:2.89:3,0,93	1/1:10,0:10:8.87:67,9,0	1/1:11,0:11:23.69:194,24,0	1/1:15,2:17:26.96:232,27,0	1/1:3,8:11:5.46:83,5,0	1/1:12,4:16:34.85:327,35,0	1/1:24,1:25:54.66:540,55,0	0/0:21,0:20:49.50:0,49,386	1/1:11,0:9:20.65:169,21,0	0/1:9,0:8:0:0,0,0	1/1:34,0:30:14.06:95,14,0	0/1:5,0:5:13.09:19,0,13	1/1:7,0:5:2.99:23,3,0	0/0:19,0:18:0.77:0,1,2	1/1:8,0:9:1.94:19,2,0	1/1:9,0:8:1.96:134,2,0	1/1:10,0:10:8.87:61,9,0	1/1:3,0:3:2.74:12,3,0
chr10	38844639	.	C	CA	124.57	PASS	AB=0.909;AC=8;AF=0.143;AN=56;BaseQRankSum=4.000;DP=429;FS=10.873;HRun=0;HaplotypeScore=76.1700;InbreedingCoeff=-0.1896;MQ=56.71;MQ0=22;MQRankSum=-0.055;QD=1.05;ReadPosRankSum=-1.969;VQSLOD=0.4402;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:20:53.95:0,54,600	0/1:6,1:7:25.73:26,0,72	0/0:23,0:12:36.01:0,36,466	0/0:19,0:9:24.08:0,24,326	0/1:16,0:13:2.05:2,0,68	0/1:9,0:9:15.68:16,0,69	0/0:22,0:19:8.24:0,8,121	0/0:15,0:11:4.36:0,4,106	0/1:9,3:12:27.54:79,0,28	0/0:19,0:19:51.04:0,51,682	0/0:14,0:14:36.10:0,36,469	0/0:13,0:13:36.08:0,36,480	0/1:11,0:11:7.69:8,0,46	0/0:13,0:13:30.34:0,30,167	0/1:8,4:11:30.33:30,0,59	0/0:8,0:8:19.93:0,20,123	0/1:28,6:33:81.10:81,0,200	0/0:33,0:31:87.62:0,88,1113	0/0:13,0:13:5.21:0,5,116	0/0:11,0:11:17.08:0,17,89	0/0:41,0:38:4.71:0,5,107	0/0:8,0:8:20.10:0,20,111	0/0:5,0:5:12.04:0,12,167	0/0:15,0:14:30:0,30,363	0/0:5,0:5:11.31:0,11,56	0/1:18,0:15:4.76:5,0,140	0/0:9,0:8:0.11:0,0,87	0/0:2,0:2:5.72:0,6,29
chr10	38845167	.	TCTC	T	4963.34	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=0.300;DP=536;FS=19.591;HRun=0;HaplotypeScore=71.7541;InbreedingCoeff=0.9580;MQ=42.97;MQ0=87;MQRankSum=-1.361;QD=13.31;ReadPosRankSum=-0.089;VQSLOD=2.8578;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:29:52.79:0,53,506	1/1:8,0:7:20.84:161,21,0	0/0:29,0:11:29.18:0,29,218	0/0:39,0:8:15.10:0,15,115	1/1:15,0:11:18.77:143,19,0	1/1:19,0:14:36.52:262,37,0	1/1:17,0:11:29.81:228,30,0	1/1:23,0:16:47.87:402,48,0	1/1:13,0:9:20.79:148,21,0	0/0:20,0:17:46.60:0,47,408	0/0:19,0:13:25.26:0,25,219	1/1:14,0:10:26.81:199,27,0	1/1:22,0:16:30.18:187,30,0	1/1:18,0:16:40.74:296,41,0	1/1:20,0:19:53.65:411,54,0	1/1:11,0:10:26.71:199,27,0	1/1:18,0:12:17.43:126,17,0	0/0:20,0:14:10.96:0,11,222	1/1:3,10:11:32.41:249,32,0	1/1:12,0:8:13.91:92,14,0	1/1:14,0:11:6.87:163,7,0	1/1:29,0:15:28.89:209,29,0	1/1:12,0:9:21.32:167,21,0	1/1:22,0:21:21.84:203,22,0	1/1:15,0:15:22.65:216,23,0	1/1:29,0:26:42.75:425,43,0	1/1:16,0:14:22.85:272,23,0	1/1:11,0:9:26.83:208,27,0
chr10	38845353	.	TC	T	1401.80	PASS	AB=0.835;AC=18;AF=0.321;AN=56;BaseQRankSum=12.271;DP=532;FS=0.463;HRun=3;HaplotypeScore=144.2248;InbreedingCoeff=-0.4830;MQ=47.23;MQ0=6;MQRankSum=-11.319;QD=5.13;ReadPosRankSum=-1.432;VQSLOD=-0.2219;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:81.27:0,81,1151	0/1:12,4:16:99:195,0,296	0/0:41,0:23:66.75:0,67,888	0/0:29,0:16:35.80:0,36,505	0/1:18,4:18:99:105,0,422	0/1:13,11:24:99:249,0,104	0/1:12,2:15:5.38:5,0,168	0/0:15,0:11:27.05:0,27,364	0/1:6,6:12:99:204,0,168	0/0:24,0:24:69.23:0,69,991	0/0:22,0:22:66.22:0,66,948	0/1:17,4:21:80.34:80,0,627	0/1:12,2:12:99:149,0,99	0/1:11,1:12:79.07:79,0,165	0/1:12,4:14:99:130,0,297	0/1:8,2:9:41.46:41,0,232	0/1:5,2:5:56.13:56,0,67	0/0:30,0:30:66.80:0,67,1094	0/1:10,1:8:15.44:15,0,200	0/1:22,3:21:12.72:13,0,741	0/1:5,1:6:24.80:25,0,194	0/0:20,5:22:0.17:0,0,689	0/0:24,3:27:32.68:0,33,948	0/0:16,2:18:6.52:0,7,554	0/1:10,3:13:90.77:91,0,110	0/1:16,3:19:94.11:94,0,455	0/1:18,2:17:17.67:18,0,631	0/1:8,1:9:8.96:9,0,278
chr10	38845370	.	TC	T	5703.90	PASS	AB=0.751;AC=30;AF=0.536;AN=56;BaseQRankSum=9.020;DP=568;FS=0.722;HRun=2;HaplotypeScore=153.8199;InbreedingCoeff=0.3886;MQ=47.49;MQ0=6;MQRankSum=-6.686;QD=17.88;ReadPosRankSum=-4.159;VQSLOD=3.5713;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:90.22:0,90,1292	1/1:7,8:15:2.39:309,2,0	0/0:38,0:19:48.16:0,48,712	0/0:25,0:13:33.88:0,34,522	0/1:6,15:17:34.77:240,0,35	0/1:28,0:28:99:120,0,314	0/1:19,0:19:5.28:5,0,216	1/1:3,21:19:51.06:612,51,0	0/1:4,9:13:43.96:192,0,44	0/0:22,0:22:66.21:0,66,955	0/0:23,0:23:69.23:0,69,1016	0/0:21,0:21:63.21:0,63,925	0/1:11,5:14:55.41:116,0,55	1/1:11,5:16:23.54:248,24,0	1/1:8,13:19:55.67:451,56,0	0/1:7,3:9:99:127,0,152	0/1:5,5:6:20.36:20,0,112	0/0:30,0:30:84.28:0,84,1256	1/1:0,12:10:27.09:341,27,0	1/1:1,24:21:57.11:691,57,0	1/1:1,3:4:12:137,12,0	0/1:12,16:25:34.81:565,0,35	0/0:33,0:33:93.29:0,93,1326	0/0:24,0:24:61:0,61,851	1/1:8,5:13:18.06:229,18,0	1/1:13,5:18:3.16:495,3,0	1/1:2,18:17:50.09:574,50,0	1/1:0,6:6:18.06:230,18,0
chr10	38845371	.	C	CTT	7870.84	PASS	AB=0.832;AC=31;AF=0.554;AN=56;BaseQRankSum=8.622;DP=566;FS=1.546;HRun=2;HaplotypeScore=156.2756;InbreedingCoeff=0.4346;MQ=47.60;MQ0=6;MQRankSum=-5.692;QD=24.44;ReadPosRankSum=-4.293;VQSLOD=2.1349;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:90.22:0,90,1369	1/1:14,1:15:28.13:466,28,0	0/0:35,0:17:48.16:0,48,764	0/0:24,0:13:36.12:0,36,557	1/1:19,0:15:1.86:384,2,0	0/1:10,0:27:99:319,0,160	0/1:11,0:20:99:103,0,205	1/1:23,1:19:51.13:711,51,0	0/1:12,1:13:33.01:251,0,33	0/0:22,0:22:66.21:0,66,1025	0/0:23,0:23:69.23:0,69,1093	0/0:21,0:21:62.75:0,63,897	0/1:9,8:15:27.93:214,0,28	1/1:10,6:17:35.98:392,36,0	1/1:20,2:20:59.28:748,59,0	0/1:9,1:9:99:169,0,126	0/1:11,0:7:54.71:55,0,94	0/0:30,0:30:84.29:0,84,1363	1/1:12,0:10:27.09:426,27,0	1/1:24,0:20:57.12:877,57,0	1/1:3,0:4:12:166,12,0	0/1:28,0:25:29.85:691,0,30	0/0:32,0:32:93.01:0,93,1355	0/0:22,0:24:58:0,58,901	1/1:6,8:14:18.06:283,18,0	1/1:6,12:19:2.04:672,2,0	1/1:18,1:16:50.90:677,51,0	1/1:6,0:6:18.06:269,18,0
chr10	38845375	.	CTA	C	1135.12	PASS	AB=0.822;AC=9;AF=0.161;AN=56;BaseQRankSum=1.821;DP=572;FS=5.020;HRun=0;HaplotypeScore=182.1806;InbreedingCoeff=-0.0204;MQ=46.43;MQ0=4;MQRankSum=-2.863;QD=7.88;ReadPosRankSum=-1.639;VQSLOD=2.9453;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:90.17:0,90,1739	0/1:11,3:14:79.23:84,0,79	0/0:30,0:17:48.57:0,49,775	0/0:27,0:13:33.01:0,33,472	0/1:17,3:16:38.56:39,0,145	0/0:26,0:26:63.49:0,63,1008	0/0:22,0:22:41.90:0,42,627	0/0:22,0:19:46.23:0,46,327	0/1:7,6:14:99:159,0,109	0/0:21,0:21:63.20:0,63,1194	0/0:23,0:23:69.24:0,69,1322	0/0:21,0:21:63.21:0,63,1174	0/1:11,5:16:21.07:190,0,21	0/1:11,4:18:12.85:260,0,13	1/1:12,6:19:0.87:268,1,0	0/0:10,0:9:22.62:0,23,307	0/1:10,2:8:76.63:86,0,77	0/0:30,0:30:84.29:0,84,1607	0/0:12,0:10:25.75:0,26,176	0/0:25,0:21:47.80:0,48,303	0/0:5,0:5:9.27:0,9,73	0/1:24,3:24:99:187,0,205	0/0:32,0:32:90.31:0,90,1706	0/0:25,0:25:66.22:0,66,1161	0/0:18,0:18:26.04:0,26,233	0/0:17,0:17:43.66:0,44,351	0/0:21,0:17:47.02:0,47,344	0/0:6,0:6:17.42:0,17,123
chr10	38845399	.	C	CT	1085.43	PASS	AB=0.851;AC=6;AF=0.107;AN=56;BaseQRankSum=2.279;DP=598;FS=0.594;HRun=2;HaplotypeScore=153.7977;InbreedingCoeff=-0.1007;MQ=55.12;MQ0=4;MQRankSum=-1.855;QD=6.96;ReadPosRankSum=-0.774;VQSLOD=0.4145;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,99,1266	0/1:10,0:10:2.89:3,0,265	0/0:30,0:18:12.91:0,13,355	0/0:24,0:14:40.76:0,41,425	0/0:21,0:17:45.14:0,45,574	0/1:27,0:27:3.13:3,0,682	0/1:22,2:24:2.67:3,0,575	0/0:21,0:18:50.83:0,51,634	0/0:21,0:21:56.96:0,57,639	0/0:23,0:23:63.20:0,63,818	0/0:25,0:25:75.24:0,75,968	0/1:11,12:23:99:420,0,263	0/0:21,0:18:51.11:0,51,604	0/0:18,0:18:41.13:0,41,374	0/0:21,0:19:55.39:0,55,536	0/0:18,0:17:48.12:0,48,601	0/0:14,1:12:30.95:0,31,360	0/0:28,0:28:81.26:0,81,1038	0/0:11,0:7:18.06:0,18,234	0/0:19,0:15:42.99:0,43,519	0/0:7,0:7:18.03:0,18,205	0/0:23,0:20:32.76:0,33,388	0/1:18,16:34:99:614,0,415	0/1:31,7:38:99:149,0,926	0/0:19,0:19:42.14:0,42,546	0/0:16,0:16:39.02:0,39,505	0/0:21,0:18:45.96:0,46,537	0/0:6,0:6:12.02:0,12,140
chr10	38846105	.	AT	A	469.36	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=2.768;DP=348;FS=0.000;HRun=8;HaplotypeScore=45.1589;InbreedingCoeff=0.8709;MQ=56.46;MQ0=1;MQRankSum=-0.782;QD=13.04;ReadPosRankSum=0.135;VQSLOD=2.2968;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:22:51.24:0,51,573	0/0:3,0:3:7.84:0,8,78	0/0:23,0:6:11.97:0,12,126	0/0:19,0:9:5.67:0,6,55	0/0:17,0:16:28.03:0,28,327	1/1:2,7:9:21.03:202,21,0	1/1:3,3:6:5.99:52,6,0	0/0:18,0:18:36.11:0,36,435	0/0:8,0:8:18.06:0,18,217	0/0:9,0:9:18.06:0,18,217	0/0:21,0:21:39.12:0,39,472	1/1:4,6:10:14.97:145,15,0	0/0:4,0:4:12.04:0,12,145	0/0:8,0:8:14.26:0,14,152	0/0:8,0:8:18.06:0,18,217	0/0:12,0:12:27.08:0,27,325	0/0:28,0:28:49.83:0,50,634	0/0:6,0:8:15.04:0,15,176	0/0:26,0:26:63.19:0,63,759	0/0:9,0:8:18.04:0,18,206	0/0:10,0:10:21.01:0,21,227	0/0:6,0:6:15.05:0,15,180	1/1:0,5:5:15.02:145,15,0	1/1:3,3:6:9.01:87,9,0	0/0:13,0:13:27.08:0,27,325	0/0:16,0:16:38.97:0,39,437	0/0:17,0:17:30.09:0,30,362	0/0:5,0:4:12.04:0,12,145
chr10	38846216	.	T	TAAA	2715.26	PASS	AB=0.910;AC=36;AF=0.643;AN=56;BaseQRankSum=1.545;DP=306;FS=7.941;HRun=17;HaplotypeScore=88.4534;InbreedingCoeff=0.5848;MQ=76.99;MQ0=4;MQRankSum=-3.941;QD=13.05;ReadPosRankSum=-2.235;VQSLOD=0.4440;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:7:5.48:0,5,46	1/1:4,1:6:12.89:154,13,0	0/1:33,0:17:3.37:3,0,110	0/0:46,0:17:7.42:0,7,60	1/1:17,0:20:5.75:141,6,0	0/0:1,0:3:8.81:0,9,53	0/0:2,0:5:11.80:0,12,81	1/1:18,0:19:18.88:177,19,0	1/1:4,0:5:9.01:111,9,0	0/0:7,0:9:14.73:0,15,118	0/0:9,0:12:23.53:0,24,188	0/1:3,0:6:16.55:17,0,17	0/1:2,0:2:0:0,0,0	1/1:4,2:8:12.86:143,13,0	1/1:2,1:7:20.99:232,21,0	1/1:3,0:6:15.82:138,16,0	1/1:16,4:21:21.01:266,21,0	0/0:8,0:9:1.11:0,1,25	1/1:5,1:7:3.90:50,4,0	1/1:13,1:15:34.63:454,35,0	1/1:4,0:5:0.80:2,1,0	1/1:2,0:2:3.01:47,3,0	0/0:5,0:5:2.75:0,3,27	1/1:4,0:4:2.98:21,3,0	1/1:3,6:11:18.02:232,18,0	1/1:4,1:11:25.18:255,25,0	1/1:8,4:14:34.56:446,35,0	0/1:5,0:5:0:0,0,0
chr10	38846255	.	AT	A	3756.16	PASS	AB=0.975;AC=35;AF=0.625;AN=56;BaseQRankSum=-0.877;DP=330;FS=19.746;HRun=1;HaplotypeScore=69.7669;InbreedingCoeff=0.2911;MQ=77.28;MQ0=4;MQRankSum=0.356;QD=14.96;ReadPosRankSum=-3.399;VQSLOD=1.3734;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:35.93:0,36,408	1/1:0,8:8:21.07:288,21,0	0/0:21,0:18:21.48:0,21,311	0/1:23,2:14:5.72:6,0,114	1/1:8,13:21:54.84:689,55,0	1/1:14,0:14:30.30:151,30,0	1/1:4,0:4:11.67:83,12,0	1/1:24,0:24:5.25:233,5,0	1/1:2,0:2:5.61:52,6,0	0/0:10,0:10:27.08:0,27,354	0/0:16,0:16:44.81:0,45,506	0/1:10,0:10:16.20:56,0,16	1/1:0,3:3:6.02:82,6,0	1/1:2,6:8:14.59:206,15,0	1/1:5,5:10:29.98:326,30,0	1/1:6,3:9:16.18:260,16,0	1/1:8,17:25:55.81:720,56,0	0/0:14,0:14:35.93:0,36,414	0/1:10,0:10:15.29:57,0,15	0/1:10,1:11:20.21:20,0,32	0/1:5,0:5:7.74:20,0,8	1/1:0,3:3:8.99:103,9,0	0/1:8,0:8:2.09:62,0,2	0/0:3,0:3:3.92:0,4,15	0/1:12,1:13:4.49:81,0,4	0/1:15,0:15:43.50:72,0,43	0/1:14,0:14:34.60:74,0,35	1/1:9,0:9:5.45:116,5,0
chr10	38846810	.	CCTTTCTCTTTTTCTTTTT	C	7815.70	PASS	AB=0.964;AC=38;AF=0.679;AN=56;BaseQRankSum=2.980;DP=397;FS=14.223;HRun=0;HaplotypeScore=202.4427;InbreedingCoeff=0.3319;MQ=78.70;MQ0=2;MQRankSum=-3.908;QD=30.29;ReadPosRankSum=3.232;VQSLOD=2.7329;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:40.03:0,40,3024	0/1:5,0:5:92.49:155,0,92	0/1:19,0:14:19.41:19,0,163	0/0:20,0:20:19.98:0,20,280	0/1:24,0:24:64.30:807,0,64	1/1:18,0:18:19.03:527,19,0	1/1:10,0:10:24.01:378,24,0	1/1:18,0:18:45.05:523,45,0	1/1:8,0:8:24.07:532,24,0	0/0:33,0:33:86.85:0,87,2896	0/0:29,0:29:81.15:0,81,3257	0/1:8,0:8:99:345,0,150	1/1:8,0:8:15.03:263,15,0	1/1:7,0:7:18.03:259,18,0	1/1:7,0:7:18.04:271,18,0	0/1:10,0:10:99:317,0,113	0/1:13,0:13:42.41:368,0,42	0/0:19,0:19:51.12:0,51,2720	1/1:13,0:13:29.63:285,30,0	1/1:15,0:15:23.71:526,24,0	1/1:5,0:5:15:131,15,0	1/1:7,0:7:18.04:294,18,0	0/1:10,7:17:99:267,0,243	0/1:13,0:13:99:323,0,129	1/1:7,0:7:17.95:331,18,0	1/1:12,0:12:35.46:439,35,0	1/1:10,0:10:24.04:349,24,0	1/1:4,0:4:12:105,12,0
chr10	38846841	.	CTT	C	4175.55	PASS	AB=0.691;AC=31;AF=0.574;AN=54;BaseQRankSum=8.507;DP=347;FS=4.340;HRun=5;HaplotypeScore=99.5321;InbreedingCoeff=0.0601;MQ=52.73;MQ0=8;MQRankSum=-7.508;QD=18.98;ReadPosRankSum=1.181;VQSLOD=0.7077;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:84.27:0,84,1457	0/1:2,2:3:6.68:74,0,7	1/1:10,0:3:2.67:11,3,0	0/0:14,1:5:0.47:0,0,1	1/1:5,20:25:49.07:699,49,0	1/1:1,9:10:11.55:284,12,0	0/1:4,2:6:76.59:108,0,77	0/1:13,1:14:82.51:83,0,248	1/1:1,7:8:7.48:273,7,0	0/0:24,0:24:69.23:0,69,1227	0/0:31,0:32:57.20:0,57,1456	0/1:4,8:11:22.55:302,0,23	0/1:1,4:5:26.10:113,0,26	1/1:1,2:3:6.02:82,6,0	1/1:0,3:3:9.03:125,9,0	1/1:1,8:9:16.60:210,17,0	0/1:6,8:14:99:213,0,170	0/0:18,0:18:54.18:0,54,955	0/1:7,4:6:68.83:69,0,81	1/1:2,8:8:15.59:247,16,0	./.	1/1:0,4:4:11.40:128,11,0	0/1:14,9:23:59.10:361,0,59	0/1:7,5:12:29.60:264,0,30	0/1:9,6:12:80.06:136,0,80	0/1:3,7:9:27.17:227,0,27	1/1:3,9:11:12.04:167,12,0	0/0:5,0:3:5.97:0,6,45
chr10	38846853	.	C	CT	1162.36	PASS	AB=0.985;AC=22;AF=0.423;AN=52;BaseQRankSum=7.505;DP=346;FS=3.803;HRun=5;HaplotypeScore=113.4350;InbreedingCoeff=0.3448;MQ=40.38;MQ0=7;MQRankSum=-6.792;QD=7.85;ReadPosRankSum=-0.995;VQSLOD=0.1533;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:75.63:0,76,795	0/1:4,0:3:15.89:31,0,16	./.	0/1:16,0:1:0:0,0,0	1/1:27,3:30:47.08:530,47,0	0/0:9,0:9:1.63:0,2,102	0/0:5,0:5:14.11:0,14,115	0/0:15,0:14:31.16:0,31,296	1/1:9,0:9:14.23:245,14,0	0/0:22,0:22:63.16:0,63,677	0/0:32,0:32:92.97:0,93,978	0/0:13,0:12:21.12:0,21,101	0/1:4,0:4:1.20:31,0,1	1/1:2,0:2:6.02:70,6,0	1/1:3,0:3:6.02:74,6,0	1/1:7,0:7:17.88:182,18,0	0/1:13,2:15:99:100,0,137	0/0:18,0:18:54.12:0,54,570	0/0:13,0:7:11.63:0,12,128	1/1:9,0:7:1.54:4,2,0	./.	0/1:4,0:4:9.33:26,0,9	0/0:24,0:24:35.56:0,36,153	0/1:9,0:9:19.66:20,0,60	0/1:20,0:15:2.82:3,0,29	0/1:13,0:10:6.74:7,0,33	0/0:9,0:8:2.51:0,3,7	1/1:3,0:2:0.45:2,0,0
chr10	38846855	.	TTTTC	T	1834.92	PASS	AB=0.939;AC=29;AF=0.558;AN=52;BaseQRankSum=9.226;DP=349;FS=1.065;HRun=0;HaplotypeScore=125.1891;InbreedingCoeff=0.2185;MQ=39.92;MQ0=8;MQRankSum=-7.981;QD=9.08;ReadPosRankSum=-2.693;VQSLOD=2.6621;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:73.48:0,73,1264	0/1:4,0:3:9.52:10,0,25	./.	0/0:16,0:1:0:0,0,0	1/1:30,0:30:37.30:274,37,0	1/1:8,2:10:14.74:197,15,0	0/1:4,2:6:62.67:104,0,63	0/0:17,0:15:24.77:0,25,314	1/1:9,0:9:11.57:94,12,0	0/0:22,0:22:60.12:0,60,1062	0/0:33,0:32:90.20:0,90,1663	1/1:8,4:11:21.03:280,21,0	0/1:3,0:3:9.49:9,0,37	1/1:2,0:2:5.62:27,6,0	1/1:3,0:3:5.75:31,6,0	0/1:8,0:7:23.30:65,0,23	0/1:15,0:15:33.60:34,0,147	0/0:18,0:18:48.15:0,48,900	0/1:12,0:7:8.76:9,0,133	1/1:9,0:7:3.85:22,4,0	./.	1/1:4,0:4:5.47:25,5,0	1/1:19,5:24:45.77:578,46,0	0/1:7,3:10:41.60:154,0,42	0/1:20,0:15:2.07:38,0,2	0/1:12,1:10:7.93:52,0,8	1/1:8,0:7:0.17:0,0,0	0/0:3,0:2:5.93:0,6,40
chr10	38846858	.	TCTTTC	T	2564.44	PASS	AB=0.910;AC=27;AF=0.519;AN=52;BaseQRankSum=9.951;DP=337;FS=1.005;HRun=0;HaplotypeScore=120.7500;InbreedingCoeff=0.1244;MQ=39.57;MQ0=9;MQRankSum=-9.001;QD=14.25;ReadPosRankSum=-3.323;VQSLOD=2.6903;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:78.24:0,78,1510	0/1:3,1:3:2.68:69,0,3	./.	0/0:17,0:1:0.47:0,0,1	1/1:16,12:28:59.75:857,60,0	0/1:10,0:10:34.41:83,0,34	0/1:6,0:6:11.61:12,0,115	0/0:17,0:15:9.81:0,10,368	1/1:2,7:9:22.89:401,23,0	0/0:24,0:23:69.20:0,69,1432	0/0:34,0:33:96.21:0,96,2034	0/1:12,0:11:24.55:25,0,40	0/1:2,1:3:21.26:69,0,21	1/1:0,2:2:6.02:110,6,0	1/1:0,2:2:6.02:114,6,0	0/1:3,5:7:1.41:271,0,1	0/1:9,2:11:93.05:93,0,114	0/0:18,0:18:54.14:0,54,1097	0/1:12,0:7:45.64:46,0,162	1/1:4,0:2:5.95:42,6,0	./.	1/1:1,1:3:8.01:77,8,0	0/1:24,0:24:55.93:56,0,56	0/0:9,0:10:1.38:0,1,102	1/1:19,0:14:27.89:207,28,0	0/1:13,0:10:22.28:160,0,22	1/1:8,0:7:5.91:38,6,0	0/1:2,0:2:0.48:1,0,0
chr10	38846859	.	C	CTT	2301.81	PASS	AB=0.954;AC=35;AF=0.673;AN=52;BaseQRankSum=10.915;DP=347;FS=3.867;HRun=5;HaplotypeScore=112.9565;InbreedingCoeff=0.4485;MQ=39.32;MQ0=9;MQRankSum=-9.010;QD=11.40;ReadPosRankSum=-0.908;VQSLOD=-0.2920;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:75.24:0,75,1047	1/1:4,0:3:3.35:16,3,0	./.	0/1:18,0:1:0:0,0,0	1/1:29,0:29:59.41:333,59,0	1/1:10,2:12:14.74:201,15,0	0/1:7,0:7:64.71:101,0,65	0/0:17,0:15:30.97:0,31,368	1/1:9,0:9:13.30:96,13,0	0/0:25,0:23:61.69:0,62,860	0/0:35,0:34:93.04:0,93,1261	1/1:8,4:11:21.07:371,21,0	1/1:3,0:3:2.13:14,2,0	1/1:2,0:2:5.62:27,6,0	1/1:2,0:2:5.75:31,6,0	1/1:8,0:7:16.02:71,16,0	0/1:11,0:11:63.87:64,0,97	0/0:18,0:18:48.15:0,48,656	0/0:12,0:7:10.01:0,10,157	1/1:4,0:2:1.44:4,1,0	./.	1/1:3,0:3:5.55:26,6,0	1/1:14,9:24:48.38:743,48,0	0/1:7,3:10:44.33:261,0,44	1/1:19,0:14:0.78:49,1,0	0/1:15,0:12:0.88:51,0,1	1/1:8,0:7:2.69:8,3,0	1/1:2,0:2:1.36:2,1,0
chr10	38846883	.	TTTTC	T	419.16	PASS	AB=0.981;AC=20;AF=0.385;AN=52;BaseQRankSum=5.367;DP=368;FS=1.232;HRun=0;HaplotypeScore=125.9660;InbreedingCoeff=-0.1360;MQ=51.72;MQ0=9;MQRankSum=-6.972;QD=1.91;ReadPosRankSum=-2.953;VQSLOD=1.8506;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:73.90:0,74,1079	0/0:2,0:1:3.01:0,3,31	0/0:15,0:6:14.94:0,15,140	0/1:18,0:7:4.43:5,0,4	0/1:37,0:37:43.84:44,0,141	0/1:16,0:16:34.23:34,0,44	0/1:6,0:6:6.63:7,0,64	0/1:21,0:18:44.06:50,0,44	0/1:4,0:4:2.81:3,0,7	0/0:26,0:24:65.84:0,66,982	0/0:39,0:38:96.53:0,97,1467	0/1:7,1:7:27.34:27,0,71	0/0:1,0:1:3.01:0,3,41	./.	0/1:3,0:3:0:0,0,0	0/1:4,0:3:6.14:6,0,34	0/1:9,0:9:31.33:31,0,99	0/0:19,0:19:53.94:0,54,755	0/1:8,0:6:14.21:14,0,51	1/1:11,0:9:11.30:44,11,0	./.	1/1:1,0:1:1.55:4,2,0	0/1:21,5:26:99:167,0,169	0/0:8,3:11:5.88:0,6,108	1/1:18,0:13:1.27:59,1,0	0/1:15,0:12:8.60:42,0,9	0/0:8,0:7:0.68:0,1,1	0/1:14,0:13:21.91:22,0,24
chr10	38851586	.	AT	A	711.10	PASS	AB=0.891;AC=11;AF=0.204;AN=54;BaseQRankSum=4.436;DP=249;FS=4.457;HRun=2;HaplotypeScore=38.7062;InbreedingCoeff=-0.0155;MQ=67.23;MQ0=4;MQRankSum=-3.268;QD=7.11;ReadPosRankSum=-3.110;VQSLOD=-0.2285;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:48.12:0,48,667	./.	0/0:6,0:4:5.99:0,6,62	0/0:31,1:13:9.25:0,9,208	0/1:7,0:7:50.04:82,0,50	0/0:9,0:9:8.83:0,9,54	0/0:5,0:5:2.94:0,3,18	0/1:22,16:35:99:374,0,627	0/0:3,0:3:2.94:0,3,18	0/0:3,0:3:9.02:0,9,118	0/0:6,0:6:18.06:0,18,268	0/0:9,0:9:8.83:0,9,54	0/0:5,0:5:8.83:0,9,54	0/0:4,0:4:5.95:0,6,62	0/0:8,0:8:5.95:0,6,61	0/0:3,0:3:2.94:0,3,18	0/0:20,0:20:32.62:0,33,284	0/1:10,0:10:8.67:9,0,371	0/1:18,0:18:99:173,0,307	1/1:1,1:2:5.61:48,6,0	0/1:1,2:3:34.68:40,0,35	0/0:1,0:1:2.92:0,3,17	1/1:2,0:2:5.19:19,5,0	0/0:5,0:5:8.83:0,9,54	0/0:3,0:3:2.90:0,3,16	0/1:6,0:6:56.29:89,0,56	0/0:11,0:11:20.95:0,21,262	0/1:13,1:14:15.13:15,0,112
chr10	38851587	.	T	TTAA	3435.39	PASS	AB=0.583;AC=41;AF=0.759;AN=54;BaseQRankSum=2.549;DP=266;FS=1.672;HRun=0;HaplotypeScore=39.0657;InbreedingCoeff=0.5255;MQ=67.52;MQ0=2;MQRankSum=-2.809;QD=17.62;ReadPosRankSum=0.468;VQSLOD=2.8782;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:42.11:0,42,568	./.	0/0:4,0:3:5.75:0,6,30	0/0:31,0:13:5.52:0,6,50	1/1:8,0:8:15.05:187,15,0	1/1:0,9:11:9.03:185,9,0	1/1:0,5:5:3.01:62,3,0	1/1:37,0:36:54.44:658,54,0	1/1:0,3:5:3.01:62,3,0	0/0:3,0:3:9.02:0,9,116	0/0:7,0:7:15.04:0,15,197	1/1:0,9:10:9.03:186,9,0	1/1:2,5:7:9.03:186,9,0	1/1:2,3:5:3.01:62,3,0	1/1:1,7:8:3.01:62,3,0	1/1:0,3:3:3.01:62,3,0	1/1:4,16:22:23.75:444,24,0	0/0:9,0:10:20.34:0,20,306	1/1:6,0:20:35.91:409,36,0	1/1:3,0:3:6.02:72,6,0	1/1:3,0:3:5.99:61,6,0	1/1:2,0:2:3.01:62,3,0	1/1:2,0:2:6.02:107,6,0	1/1:0,5:5:9.03:186,9,0	1/1:0,0:4:3.01:40,3,0	0/1:2,0:7:26.53:145,0,27	1/1:6,0:12:3.01:40,3,0	1/1:4,0:14:11.85:158,12,0
chr10	38851591	.	T	TAAT	3435.39	PASS	AB=1.000;AC=41;AF=0.759;AN=54;BaseQRankSum=2.549;DP=266;FS=1.672;HRun=0;HaplotypeScore=38.6378;InbreedingCoeff=0.5255;MQ=66.17;MQ0=2;MQRankSum=-2.970;QD=17.53;ReadPosRankSum=0.796;VQSLOD=3.2011;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:42.11:0,42,568	./.	0/0:4,0:3:5.75:0,6,30	0/0:26,0:12:5.52:0,6,50	1/1:2,5:8:15.05:187,15,0	1/1:11,0:11:9.03:185,9,0	1/1:5,0:5:3.01:62,3,0	1/1:36,0:33:54.44:658,54,0	1/1:5,0:5:3.01:62,3,0	0/0:4,0:4:9.02:0,9,116	0/0:7,0:7:15.04:0,15,197	1/1:10,0:10:9.03:186,9,0	1/1:7,0:7:9.03:186,9,0	1/1:6,0:6:3.01:62,3,0	1/1:7,0:7:3.01:62,3,0	1/1:3,0:3:3.01:62,3,0	1/1:23,0:23:23.75:444,24,0	0/0:10,0:10:20.34:0,20,306	1/1:21,0:21:35.91:409,36,0	1/1:3,0:3:6.02:72,6,0	1/1:3,0:3:5.99:61,6,0	1/1:2,0:2:3.01:62,3,0	1/1:4,0:4:6.02:107,6,0	1/1:6,0:6:9.03:186,9,0	1/1:5,0:5:3.01:40,3,0	0/1:7,0:7:26.53:145,0,27	1/1:12,0:12:3.01:40,3,0	1/1:12,0:12:11.85:158,12,0
chr10	38854328	.	GT	G	1684.60	PASS	AB=0.957;AC=12;AF=0.214;AN=56;BaseQRankSum=-3.349;DP=600;FS=9.590;HRun=10;HaplotypeScore=118.1658;InbreedingCoeff=0.7979;MQ=57.51;MQ0=4;MQRankSum=6.037;QD=11.31;ReadPosRankSum=1.658;VQSLOD=2.0864;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:19.09:0,19,417	0/0:10,0:10:21.06:0,21,230	0/1:30,0:14:24.54:25,0,62	0/0:14,0:6:11.37:0,11,67	0/0:33,0:33:75.19:0,75,811	1/1:3,32:36:88.04:741,88,0	1/1:4,11:15:23.99:208,24,0	0/0:20,0:32:59.63:0,60,320	0/0:16,0:17:42.11:0,42,458	0/0:33,1:34:64.18:0,64,925	0/0:30,0:31:81.04:0,81,868	1/1:2,12:14:23.99:208,24,0	0/0:18,0:18:47.96:0,48,510	0/0:19,0:19:45.11:0,45,485	0/0:22,0:22:57.14:0,57,608	0/1:19,2:21:4.79:5,0,441	0/0:18,0:18:45.09:0,45,481	0/0:18,0:18:36.07:0,36,386	0/0:26,0:31:54.40:0,54,313	0/0:15,0:23:49.36:0,49,241	0/0:2,0:7:14.32:0,14,76	0/0:17,0:17:36.10:0,36,392	1/1:2,16:17:44.99:391,45,0	1/1:2,12:14:32.99:286,33,0	0/0:13,0:19:40.44:0,40,188	0/0:11,0:20:47.67:0,48,225	0/0:26,0:33:60.41:0,60,314	0/0:9,0:12:19.76:0,20,76
chr10	38854336	.	TTTG	T	1747.59	PASS	AB=0.778;AC=8;AF=0.143;AN=56;BaseQRankSum=5.391;DP=583;FS=18.122;HRun=0;HaplotypeScore=136.1898;InbreedingCoeff=-0.1735;MQ=55.96;MQ0=5;MQRankSum=-5.484;QD=9.20;ReadPosRankSum=-1.920;VQSLOD=1.9620;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:44.20:0,44,826	0/0:8,0:8:20.92:0,21,268	0/1:30,0:13:8.13:8,0,151	0/0:15,0:7:9:0,9,50	0/0:27,0:27:69.25:0,69,930	0/0:39,0:38:97.29:0,97,775	0/0:12,0:12:26.98:0,27,237	0/1:25,4:28:84.20:84,0,448	0/0:17,0:17:41.83:0,42,522	0/0:35,0:35:96.24:0,96,1703	0/0:33,0:33:96.16:0,96,1761	0/0:14,0:14:29.96:0,30,267	0/0:19,0:19:47.81:0,48,771	0/0:20,0:20:44.56:0,45,447	0/0:22,0:22:53.50:0,54,638	0/0:21,0:21:48.51:0,49,625	0/0:21,0:21:39.70:0,40,652	0/0:16,0:16:37.25:0,37,591	0/1:21,6:27:99:369,0,177	0/1:17,6:23:99:290,0,148	0/0:9,0:7:3.92:0,4,101	0/0:13,0:13:35.68:0,36,345	0/0:21,0:20:56.81:0,57,456	0/0:12,0:12:32.93:0,33,267	0/1:12,7:18:99:224,0,130	0/1:12,8:20:99:208,0,295	0/1:18,15:33:82.91:526,0,83	0/1:3,6:9:46.75:172,0,47
chr10	38854343	.	GTTTTTGT	G	10019.54	PASS	AB=0.704;AC=31;AF=0.574;AN=54;BaseQRankSum=7.750;DP=560;FS=0.000;HRun=0;HaplotypeScore=143.2593;InbreedingCoeff=0.8832;MQ=54.95;MQ0=5;MQRankSum=-11.357;QD=31.51;ReadPosRankSum=1.737;VQSLOD=4.2473;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:54.14:0,54,1466	1/1:3,5:8:12.04:276,12,0	0/0:23,0:12:7.85:0,8,215	0/0:15,0:6:6.02:0,6,103	1/1:8,18:25:45.12:980,45,0	0/0:35,0:34:78.27:0,78,2759	0/0:13,0:13:24.07:0,24,761	1/1:21,9:33:39.10:671,39,0	1/1:7,12:20:24.08:552,24,0	0/0:32,0:32:78.27:0,78,2692	0/0:35,0:35:90.31:0,90,3131	0/0:15,0:15:27.09:0,27,929	1/1:12,7:19:12.04:271,12,0	1/1:4,17:21:27.09:620,27,0	1/1:7,16:23:33.11:758,33,0	1/1:8,14:22:36.12:817,36,0	1/1:10,10:20:15.05:345,15,0	0/0:13,0:13:22.32:0,22,635	1/1:8,3:15:24.06:497,24,0	1/1:8,4:19:33.11:704,33,0	./.	1/1:2,11:13:27.09:581,27,0	0/0:21,0:20:48.16:0,48,1652	0/0:13,0:13:21.07:0,21,764	1/1:7,4:17:27.09:617,27,0	0/1:11,0:19:81.12:587,0,81	1/1:7,9:32:60.21:1336,60,0	1/1:2,0:8:18.06:407,18,0
chr10	38854349	.	GT	G	1234.54	PASS	AB=0.862;AC=15;AF=0.268;AN=56;BaseQRankSum=14.727;DP=544;FS=2.624;HRun=6;HaplotypeScore=108.8269;InbreedingCoeff=-0.3699;MQ=52.95;MQ0=5;MQRankSum=-12.666;QD=4.39;ReadPosRankSum=6.127;VQSLOD=-0.6088;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:62.21:0,62,773	0/1:8,0:8:2.99:3,0,88	0/0:19,0:9:11.03:0,11,115	0/0:15,0:5:6.02:0,6,72	0/1:26,0:25:35.75:36,0,324	0/0:32,0:31:87.27:0,87,1129	0/0:15,0:15:33.09:0,33,416	0/1:27,4:30:99:264,0,301	0/1:16,0:17:18.23:18,0,45	0/0:36,0:36:99:0,99,1277	0/0:35,0:35:96.31:0,96,1263	0/0:15,0:15:33.11:0,33,432	0/0:18,0:18:1.66:0,2,339	0/1:21,0:21:21.84:22,0,53	0/1:21,0:21:25.42:25,0,68	0/1:21,0:21:63.79:64,0,179	0/1:18,0:18:4.17:4,0,166	0/0:13,0:14:29.01:0,29,376	0/1:9,5:13:49.46:119,0,49	0/1:9,7:16:99:158,0,114	0/0:7,0:5:9.02:0,9,109	0/1:12,0:12:19.25:19,0,52	0/0:24,0:23:66.21:0,66,866	0/0:12,0:12:27.04:0,27,327	0/1:9,7:15:97.71:98,0,115	0/1:13,9:22:99:204,0,276	0/1:12,16:28:22.56:233,0,23	0/1:4,6:10:48.31:118,0,48
chr10	38855161	.	C	CTCT	14899.46	PASS	AB=0.553;AC=43;AF=0.768;AN=56;BaseQRankSum=-11.172;DP=596;FS=3.783;HRun=0;HaplotypeScore=72.6122;InbreedingCoeff=0.8953;MQ=66.13;MQ0=3;MQRankSum=0.486;QD=32.04;ReadPosRankSum=3.458;VQSLOD=5.1109;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:69.21:0,69,1023	1/1:0,7:7:15.05:322,15,0	0/0:18,0:15:38.94:0,39,444	0/0:13,0:10:20.86:0,21,236	1/1:2,20:22:39.04:713,39,0	1/1:4,28:34:27.09:554,27,0	1/1:4,9:13:11.07:199,11,0	1/1:11,33:44:99:1461,99,0	1/1:2,21:24:33.11:708,33,0	0/0:17,0:17:39.13:0,39,593	0/0:27,0:27:78.17:0,78,1130	1/1:3,16:20:24.08:504,24,0	1/1:1,21:22:36.12:773,36,0	1/1:1,15:16:27.09:580,27,0	1/1:1,15:18:27.09:580,27,0	1/1:0,19:19:30.10:634,30,0	1/1:4,26:30:36.37:1095,36,0	0/0:26,0:26:60.01:0,60,802	1/1:6,11:16:35.95:638,36,0	1/1:4,24:29:75.02:1295,75,0	1/1:3,15:18:22.50:513,23,0	1/1:1,8:9:17.98:297,18,0	1/1:1,20:22:27.09:578,27,0	1/1:0,15:15:15.05:322,15,0	1/1:4,19:23:33.09:667,33,0	0/1:5,21:26:8.14:1117,0,8	1/1:2,16:19:36.12:770,36,0	1/1:4,12:16:27.09:580,27,0
chr10	38855323	.	G	GT	438.47	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-4.218;DP=467;FS=1.574;HRun=10;HaplotypeScore=50.5667;InbreedingCoeff=0.8825;MQ=64.60;MQ0=1;MQRankSum=0.871;QD=15.12;ReadPosRankSum=0.137;VQSLOD=3.5909;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:53.85:0,54,476	0/0:8,0:8:23.97:0,24,197	0/0:11,0:8:23.89:0,24,186	0/0:11,0:10:15.44:0,15,123	0/0:27,0:27:68.88:0,69,563	1/1:5,17:22:24.07:456,24,0	1/1:1,6:7:8.99:96,9,0	0/0:26,0:26:62.87:0,63,513	0/0:14,0:14:12.14:0,12,240	0/0:18,0:18:32.94:0,33,271	0/0:14,0:16:45.25:0,45,338	0/0:9,0:9:13.70:0,14,184	0/0:11,0:11:29.95:0,30,242	0/0:10,0:10:26.93:0,27,216	0/0:15,0:15:24.51:0,25,257	0/0:13,0:13:32.96:0,33,271	0/0:25,0:25:55.48:0,55,447	0/0:15,0:15:9.82:0,10,191	0/0:20,1:22:21.63:0,22,372	0/0:28,0:28:74.87:0,75,609	0/0:6,0:8:14.02:0,14,104	0/0:4,0:4:11.99:0,12,98	0/0:14,0:14:38.92:0,39,314	0/0:9,0:10:26.01:0,26,203	0/0:32,1:33:48.88:0,49,605	0/0:22,0:22:47.90:0,48,389	0/0:23,0:23:56.87:0,57,459	0/0:19,0:20:47.62:0,48,396
chr10	38855663	.	AT	A	4906.78	PASS	AB=0.957;AC=35;AF=0.625;AN=56;BaseQRankSum=5.036;DP=453;FS=3.870;HRun=11;HaplotypeScore=64.0124;InbreedingCoeff=0.8833;MQ=62.70;MQ0=1;MQRankSum=0.513;QD=16.30;ReadPosRankSum=0.807;VQSLOD=5.7411;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,1:21:59.63:0,60,581	1/1:0,6:6:17.94:142,18,0	0/0:11,2:11:11.90:0,12,85	0/0:19,0:15:4.46:0,4,121	1/1:1,19:20:56.86:461,57,0	0/0:20,0:20:39.10:0,39,415	0/0:13,1:14:11.43:0,11,320	1/1:8,25:33:49.67:544,50,0	1/1:3,12:15:26.95:220,27,0	0/0:16,1:17:39.09:0,39,410	0/1:21,1:22:3.54:4,0,371	0/0:7,0:7:15.04:0,15,160	1/1:7,16:23:23.77:345,24,0	1/1:3,12:15:3.96:238,4,0	1/1:4,10:14:26.94:222,27,0	1/1:2,8:10:23.97:197,24,0	1/1:3,16:21:46.01:356,46,0	0/0:7,0:7:17.72:0,18,171	1/1:7,14:19:38.94:320,39,0	1/1:1,15:16:41.90:339,42,0	1/1:1,7:8:20.97:172,21,0	1/1:4,6:11:17.01:129,17,0	0/0:10,0:10:18.05:0,18,192	0/0:19,0:19:35.04:0,35,375	1/1:1,16:17:41.94:345,42,0	1/1:2,16:18:38.90:316,39,0	1/1:3,12:15:29.85:246,30,0	1/1:2,14:16:12.96:313,13,0
chr10	38855695	.	TTC	T	1650.65	PASS	AC=48;AF=0.923;AN=52;BaseQRankSum=0.738;DP=544;FS=0.000;HRun=0;HaplotypeScore=103.9899;InbreedingCoeff=0.3515;MQ=62.11;MQ0=33;MQRankSum=-1.080;QD=4.02;ReadPosRankSum=1.454;VQSLOD=2.5055;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:16:2.84:14,3,0	1/1:4,2:5:3.01:33,3,0	1/1:58,0:18:1.25:3,1,0	./.	1/1:15,1:17:5.84:47,6,0	1/1:3,0:21:11.36:56,11,0	1/1:7,0:14:5.68:28,6,0	0/0:25,0:25:2.98:0,3,22	1/1:10,6:16:25.14:245,25,0	1/1:9,0:11:5.68:28,6,0	1/1:12,0:15:5.68:28,6,0	1/1:4,0:12:17.04:84,17,0	1/1:16,2:22:17.37:121,17,0	1/1:12,6:21:3.76:201,4,0	1/1:9,4:16:20.41:165,20,0	1/1:11,2:15:20.23:143,20,0	1/1:17,6:28:31.72:281,32,0	./.	1/1:12,0:14:5.68:28,6,0	1/1:12,0:13:2.84:14,3,0	1/1:8,0:9:2.84:14,3,0	1/1:9,0:9:2.96:25,3,0	1/1:5,0:8:2.84:14,3,0	1/1:11,0:17:5.68:28,6,0	0/0:15,0:16:21.55:0,22,174	1/1:16,0:17:8.49:42,8,0	1/1:11,0:16:19.79:96,20,0	1/1:14,0:14:5.68:28,6,0
chr10	38856728	.	C	CA	17533.70	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-3.836;DP=668;FS=1.300;HRun=1;HaplotypeScore=77.0579;InbreedingCoeff=0.9997;MQ=81.91;MQ0=1;MQRankSum=-2.785;QD=43.29;ReadPosRankSum=2.917;VQSLOD=4.9398;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:99:0,99,1365	1/1:0,9:9:27.09:432,27,0	0/0:22,0:23:51.12:0,51,842	0/0:18,0:18:51.13:0,51,659	1/1:0,34:34:96.33:1534,96,0	0/0:28,0:28:81.26:0,81,1115	0/0:35,0:35:99:0,105,1448	1/1:1,31:32:93.30:1453,93,0	1/1:0,14:14:33.11:527,33,0	0/0:19,0:19:57.19:0,57,794	0/0:17,0:17:51.17:0,51,707	0/0:30,0:30:90.30:0,90,1257	1/1:1,11:12:33.11:527,33,0	1/1:0,27:27:78.27:1247,78,0	1/1:0,21:21:57.19:910,57,0	1/1:0,14:14:39.13:623,39,0	1/1:0,31:31:87.30:1391,87,0	0/0:23,0:23:69.23:0,69,963	1/1:3,19:23:63.21:980,63,0	1/1:0,28:28:78.27:1245,78,0	1/1:2,33:33:78.26:1247,78,0	1/1:0,20:20:48.16:767,48,0	0/0:15,0:15:45.15:0,45,627	0/0:22,0:22:63.21:0,63,879	1/1:1,28:29:78.27:1247,78,0	1/1:0,26:26:78.27:1248,78,0	1/1:0,37:37:99:1582,99,0	1/1:0,13:12:36.12:576,36,0
chr10	38856873	.	GA	G	3847	PASS	AB=0.856;AC=35;AF=0.625;AN=56;BaseQRankSum=2.230;DP=533;FS=28.506;HRun=13;HaplotypeScore=72.2238;InbreedingCoeff=0.7784;MQ=67.30;MQ0=1;MQRankSum=1.581;QD=11.31;ReadPosRankSum=1.583;VQSLOD=1.1790;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,1:36:61.70:0,62,715	1/1:3,4:7:11.92:88,12,0	0/1:16,1:10:15.86:16,0,23	0/1:17,0:12:3.47:3,0,69	0/1:13,19:33:5.68:281,0,6	0/0:7,0:18:28.89:0,29,182	0/0:5,0:15:12.17:0,12,138	1/1:5,23:28:42.59:472,43,0	1/1:5,5:10:13.72:92,14,0	0/0:19,1:20:23.16:0,23,387	0/0:22,0:26:65.52:0,66,576	0/0:4,0:16:19.96:0,20,114	1/1:1,10:11:20.88:153,21,0	1/1:3,9:12:17.88:131,18,0	1/1:9,13:23:40.79:290,41,0	1/1:3,16:19:35.79:263,36,0	1/1:7,16:24:40.08:367,40,0	0/0:21,0:21:49.70:0,50,479	1/1:7,11:17:32.78:241,33,0	1/1:7,15:25:26.85:296,27,0	1/1:4,2:7:8:50,8,0	1/1:5,11:17:28.87:203,29,0	0/0:11,0:20:21.98:0,22,122	0/0:4,0:21:40.24:0,40,234	1/1:3,17:20:18.55:299,19,0	1/1:7,13:20:12.49:248,12,0	1/1:9,15:25:14.59:261,15,0	1/1:4,2:7:13.96:93,14,0
chr10	38859358	.	CATATATATATATATATATAT	C	11287.58	PASS	AB=0.736;AC=38;AF=0.864;AN=44;BaseQRankSum=1.520;DP=323;FS=1.749;HRun=0;HaplotypeScore=159.6721;InbreedingCoeff=0.2526;MQ=69.06;MQ0=6;MQRankSum=-1.329;QD=42.43;ReadPosRankSum=3.048;VQSLOD=4.3186;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	1/1:3,4:7:6.02:261,6,0	./.	0/0:15,0:6:4.26:0,4,53	1/1:12,9:19:15.05:808,15,0	0/1:8,2:15:40.81:600,0,41	1/1:7,0:8:3.01:99,3,0	1/1:21,4:25:15.03:265,15,0	1/1:6,5:10:12.04:646,12,0	./.	./.	1/1:5,0:8:3.01:140,3,0	1/1:4,6:8:15.05:808,15,0	1/1:1,5:8:21.07:1087,21,0	1/1:5,7:13:18.06:948,18,0	1/1:6,3:10:12.04:624,12,0	1/1:17,4:20:3.48:163,3,0	0/0:2,0:2:3.01:0,3,38	0/1:11,3:15:24.37:471,0,24	1/1:10,8:17:12.04:646,12,0	./.	1/1:4,3:6:9.03:485,9,0	1/1:3,0:6:6.02:279,6,0	1/1:5,0:11:9.03:371,9,0	1/1:7,7:13:12.04:646,12,0	1/1:9,7:16:15.05:808,15,0	1/1:7,13:19:21.07:1131,21,0	./.
chr10	38859895	.	T	TAA	2136.20	PASS	AB=0.556;AC=17;AF=0.304;AN=56;BaseQRankSum=1.988;DP=363;FS=19.502;HRun=10;HaplotypeScore=58.0878;InbreedingCoeff=0.7548;MQ=63.23;MQ0=2;MQRankSum=-1.549;QD=19.07;ReadPosRankSum=0.922;VQSLOD=0.7310;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,17:20:43.02:607,43,0	0/0:4,0:4:12.03:0,12,122	0/0:18,0:10:3.54:0,4,54	0/0:23,0:10:6.30:0,6,110	0/0:15,0:15:33.03:0,33,327	1/1:4,0:22:0.83:111,1,0	0/1:1,0:5:6.61:22,0,7	0/0:35,0:34:84.15:0,84,849	0/0:6,0:6:18.04:0,18,183	1/1:2,7:9:24.05:333,24,0	1/1:3,9:12:30.10:446,30,0	1/1:1,0:7:14.85:52,15,0	0/0:4,0:4:5.99:0,6,61	0/0:6,0:6:18.01:0,18,174	0/0:6,0:6:18.04:0,18,183	0/0:4,0:4:12.03:0,12,122	0/0:28,0:28:71.79:0,72,695	1/1:2,20:24:47.65:680,48,0	0/0:26,0:24:54.08:0,54,549	0/0:10,0:11:26.79:0,27,256	0/0:2,0:2:3:0,3,31	0/0:2,0:2:3:0,3,30	1/1:2,0:6:12.58:45,13,0	1/1:3,0:6:9.30:31,9,0	0/0:13,0:13:29.40:0,29,283	0/0:14,0:14:39.07:0,39,397	0/0:19,0:20:50.79:0,51,483	0/0:13,0:13:24:0,24,244
chr10	38859913	.	TA	T	827.65	PASS	AB=0.926;AC=12;AF=0.214;AN=56;BaseQRankSum=6.819;DP=384;FS=6.561;HRun=11;HaplotypeScore=58.9270;InbreedingCoeff=0.6622;MQ=73.78;MQ0=1;MQRankSum=-5.186;QD=8.28;ReadPosRankSum=-0.364;VQSLOD=1.8718;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:19:27.37:0,27,271	0/0:4,0:4:12.03:0,12,128	0/0:21,0:12:14.16:0,14,146	0/1:31,0:17:14.27:14,0,56	0/0:17,0:17:42.08:0,42,433	1/1:2,18:20:24:392,24,0	1/1:0,6:6:17.98:148,18,0	0/0:29,0:28:54.10:0,54,556	0/0:5,0:5:12.03:0,12,128	0/1:13,2:15:13.16:13,0,284	0/0:12,0:13:27.06:0,27,278	1/1:2,9:11:23.96:197,24,0	0/0:2,0:2:6.02:0,6,64	0/0:10,0:10:27.07:0,27,287	0/0:9,0:9:27.07:0,27,288	0/0:5,0:5:15.02:0,15,152	0/0:24,2:25:19.95:0,20,623	0/0:23,0:23:57.08:0,57,580	0/0:29,0:29:63.13:0,63,657	0/0:12,1:13:8.42:0,8,280	0/0:4,0:4:12.02:0,12,120	0/0:2,0:2:6.02:0,6,64	1/1:1,3:5:8.02:55,8,0	1/1:0,10:10:23.83:182,24,0	0/0:10,1:11:5.43:0,5,263	0/0:12,1:13:11.45:0,11,323	0/0:18,0:18:45.09:0,45,471	0/0:10,1:11:5.43:0,5,263
chr10	38862237	.	G	GT	5275.83	PASS	AB=0.741;AC=39;AF=0.696;AN=56;BaseQRankSum=1.235;DP=667;FS=10.354;HRun=12;HaplotypeScore=97.9230;InbreedingCoeff=0.4428;MQ=60.34;MQ0=17;MQRankSum=-1.191;QD=9.92;ReadPosRankSum=1.700;VQSLOD=3.3379;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:29:66.62:0,67,466	0/1:4,9:14:1.04:139,0,1	0/1:45,0:18:2.52:3,0,45	0/0:35,0:15:2.83:0,3,40	1/1:9,20:31:8.37:445,8,0	0/0:18,0:18:22.16:0,22,64	0/0:20,0:20:31.02:0,31,89	1/1:15,1:26:33.62:168,34,0	1/1:5,20:25:47.44:444,47,0	0/1:25,4:29:13.88:14,0,388	0/0:32,1:33:45.72:0,46,476	1/1:9,0:21:49.84:233,50,0	1/1:2,16:18:42.07:409,42,0	0/1:7,13:22:4.94:252,0,5	1/1:5,18:24:10.21:405,10,0	1/1:6,13:19:11.14:268,11,0	0/1:7,13:23:15.24:285,0,15	0/1:16,2:20:12.53:13,0,228	1/1:6,0:21:46.15:247,46,0	1/1:5,0:24:54.82:312,55,0	1/1:7,1:25:37.57:200,38,0	0/1:11,15:28:29.85:368,0,30	1/1:8,0:17:28.11:146,28,0	1/1:9,0:17:32.86:158,33,0	1/1:5,0:18:30.68:149,31,0	1/1:10,0:27:51.74:290,52,0	1/1:4,4:21:40.43:259,40,0	1/1:1,0:7:11.53:71,12,0
chr10	38862248	.	TTG	T	975.76	PASS	AB=0.955;AC=5;AF=0.089;AN=56;BaseQRankSum=0.259;DP=659;FS=21.850;HRun=0;HaplotypeScore=114.2319;InbreedingCoeff=0.7566;MQ=58.15;MQ0=16;MQRankSum=0.515;QD=18.41;ReadPosRankSum=0.405;VQSLOD=1.6192;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:81.01:0,81,1253	0/0:13,0:13:27.05:0,27,356	0/0:41,0:15:16.19:0,16,279	0/0:30,0:12:18:0,18,190	0/0:32,0:31:80.38:0,80,998	1/1:0,14:14:33.11:449,33,0	1/1:2,16:18:47.51:620,48,0	0/0:27,0:26:38.29:0,38,604	0/0:26,0:26:57.02:0,57,664	0/0:36,0:35:99:0,105,1511	0/0:31,0:31:92.79:0,93,1402	0/1:20,0:21:36.82:37,0,263	0/0:20,0:20:54.11:0,54,604	0/0:20,0:20:48.11:0,48,578	0/0:30,0:30:49.79:0,50,832	0/0:20,0:20:48.06:0,48,566	0/0:23,0:23:60.14:0,60,770	0/0:19,0:19:36.85:0,37,761	0/0:25,0:24:57.66:0,58,691	0/0:25,0:25:31.87:0,32,675	0/0:26,0:24:48.57:0,49,549	0/0:26,0:25:72.14:0,72,951	0/0:16,0:16:30.22:0,30,265	0/0:16,0:16:14.76:0,15,179	0/0:21,0:21:39.69:0,40,483	0/0:29,0:27:71.90:0,72,742	0/0:19,0:19:48.10:0,48,549	0/0:6,0:6:12.01:0,12,124
chr10	38862253	.	TTTTG	T	735.28	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=4.644;DP=652;FS=2.818;HRun=0;HaplotypeScore=137.6891;InbreedingCoeff=0.8307;MQ=58.10;MQ0=15;MQRankSum=-0.226;QD=8.65;ReadPosRankSum=0.513;VQSLOD=3.1565;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:69.24:0,69,1616	0/0:12,0:12:30.10:0,30,683	0/0:37,0:14:12.51:0,13,248	0/1:30,0:13:2.97:3,0,163	0/0:33,0:32:60.17:0,60,1262	0/0:15,0:15:30.10:0,30,652	0/0:19,0:19:27.08:0,27,571	0/0:27,0:26:33.10:0,33,669	0/0:26,0:26:42.08:0,42,851	0/0:37,1:37:26.92:0,27,1548	0/0:29,0:29:69.24:0,69,1604	1/1:14,7:21:30.09:449,30,0	0/0:21,0:21:36.12:0,36,849	0/0:18,0:18:48.16:0,48,1055	0/0:29,0:29:45.15:0,45,996	0/0:20,0:20:39.13:0,39,830	0/0:22,0:22:45.15:0,45,1071	0/0:19,0:20:36.10:0,36,763	0/0:24,0:23:36:0,36,655	0/0:24,0:24:60.21:0,60,1357	0/0:26,0:24:31.35:0,31,691	0/0:26,0:25:57.18:0,57,1248	1/1:12,5:17:10.63:141,11,0	1/1:17,0:16:20.77:280,21,0	0/0:19,0:19:30.10:0,30,704	0/0:29,0:27:39.11:0,39,814	0/0:17,0:17:30.10:0,30,706	0/0:6,0:6:6.02:0,6,144
chr10	38863041	.	CAT	C	812.26	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=5.305;DP=166;FS=1.328;HRun=0;HaplotypeScore=26.3722;InbreedingCoeff=0.7172;MQ=99.16;MQ0=0;MQRankSum=0.049;QD=19.34;ReadPosRankSum=-0.199;VQSLOD=3.3267;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:39.13:0,39,652	1/1:0,1:1:3.01:38,3,0	0/0:16,0:15:24.83:0,25,293	0/1:14,0:10:0.92:1,0,139	1/1:0,5:5:15.05:191,15,0	0/0:9,0:9:24.08:0,24,402	0/0:2,0:2:6.02:0,6,100	0/0:15,0:15:39.12:0,39,629	1/1:0,1:1:3.01:38,3,0	0/0:7,0:7:18.06:0,18,301	0/0:7,0:7:21.07:0,21,351	0/0:5,0:5:15.05:0,15,249	1/1:0,4:4:9.03:115,9,0	1/1:0,2:2:6.02:76,6,0	1/1:0,6:6:18.06:229,18,0	1/1:0,2:2:6.02:76,6,0	1/1:1,3:4:9.03:115,9,0	0/0:13,0:13:30.10:0,30,496	0/0:2,0:2:3.01:0,3,50	0/0:5,0:5:15.05:0,15,251	0/0:2,0:2:6.02:0,6,100	1/1:0,3:3:9.03:115,9,0	0/0:2,0:2:6.02:0,6,100	0/0:1,0:1:3.01:0,3,50	0/0:6,0:6:18.06:0,18,295	0/0:5,0:5:15.05:0,15,251	0/0:3,0:3:9.03:0,9,135	0/0:11,0:11:33.11:0,33,533
chr10	38863523	.	GT	G	13974.43	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=8.469;DP=661;FS=2.176;HRun=7;HaplotypeScore=64.4029;InbreedingCoeff=0.9991;MQ=81.28;MQ0=0;MQRankSum=-1.887;QD=26.32;ReadPosRankSum=0.667;VQSLOD=5.5328;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:78.24:0,78,968	1/1:1,9:10:24.05:245,24,0	0/0:20,0:20:36.10:0,36,431	0/0:19,0:19:54.12:0,54,657	1/1:1,34:35:99:1010,99,0	1/1:1,19:20:54.12:551,54,0	1/1:4,21:25:60.14:612,60,0	1/1:5,25:30:75.11:742,75,0	1/1:1,22:23:57.13:582,57,0	0/0:32,0:32:93.28:0,93,1149	0/0:16,0:16:48.14:0,48,591	1/1:1,18:19:45.10:459,45,0	1/1:2,20:22:57.13:581,57,0	1/1:3,22:25:66.15:673,66,0	1/1:0,29:29:81.18:826,81,0	1/1:1,31:32:90.20:918,90,0	1/1:1,20:21:57.13:581,57,0	0/0:14,0:14:42.13:0,42,527	1/1:2,20:22:60.14:612,60,0	1/1:1,26:27:75.10:752,75,0	1/1:1,20:21:57.13:582,57,0	1/1:3,17:20:51.11:520,51,0	1/1:1,24:25:69.16:704,69,0	1/1:3,18:21:48.10:490,48,0	1/1:2,22:24:60.14:612,60,0	1/1:5,27:32:46.45:789,46,0	1/1:2,32:34:86.70:887,87,0	1/1:1,13:14:24.05:245,24,0
chr10	38865043	.	T	TTCTCTCTC	241.55	PASS	AB=1.000;AC=16;AF=0.364;AN=44;BaseQRankSum=4.461;DP=338;FS=6.300;HRun=0;HaplotypeScore=167.6159;InbreedingCoeff=0.1010;MQ=72.31;MQ0=4;MQRankSum=-2.332;QD=1.70;ReadPosRankSum=-4.568;VQSLOD=-0.0266;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:0.76:0,1,41	0/0:2,0:2:3.01:0,3,59	0/0:16,0:13:6.02:0,6,119	0/0:33,0:20:2.30:0,2,21	0/0:8,0:8:3:0,3,27	1/1:10,2:11:0.89:2,1,0	1/1:17,2:19:5.98:59,6,0	0/1:21,0:21:95.04:95,0,192	0/1:12,0:12:23.40:23,0,77	0/0:15,0:14:2.41:0,2,75	./.	1/1:9,0:9:2.97:20,3,0	0/0:18,0:18:3.83:0,4,126	0/1:8,0:8:0:0,0,0	1/1:18,0:18:3.01:37,3,0	./.	0/0:10,0:10:12:0,12,209	0/0:7,0:7:3.01:0,3,71	0/1:12,0:11:21.38:21,0,123	0/0:10,0:10:2.98:0,3,22	0/0:14,0:15:7.57:0,8,113	./.	1/1:8,0:8:3.01:77,3,0	./.	./.	0/1:6,0:6:0:0,0,0	0/1:17,0:17:25.83:26,0,134	./.
chr10	38865752	.	A	ACGCGCGCG	485.77	PASS	AB=0.857;AC=12;AF=0.231;AN=52;BaseQRankSum=1.144;DP=323;FS=24.733;HRun=0;HaplotypeScore=137.6966;InbreedingCoeff=0.5147;MQ=48.81;MQ0=1;MQRankSum=-5.561;QD=5.46;ReadPosRankSum=-3.433;VQSLOD=-0.1592;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:20.55:0,21,679	0/0:2,0:2:1.82:0,2,5	0/0:5,0:3:3.01:0,3,36	0/0:5,0:4:6.44:0,6,64	0/1:17,0:17:5.54:6,0,103	0/0:14,0:14:6.02:0,6,88	0/0:30,0:30:18.52:0,19,216	1/1:21,0:20:12.92:172,13,0	0/0:7,0:7:6.01:0,6,87	0/0:14,0:14:12.19:0,12,381	0/0:11,0:11:12:0,12,226	0/0:14,0:14:5.73:0,6,242	0/0:10,0:10:14.88:0,15,274	0/0:11,0:11:21.54:0,22,452	0/0:11,0:11:3.07:0,3,116	0/0:8,0:8:11.78:0,12,249	0/0:15,0:15:28.03:0,28,545	0/0:10,0:10:20.72:0,21,473	1/1:11,0:11:9.02:121,9,0	./.	0/1:9,5:15:0.03:0,0,0	0/0:8,0:8:3.01:0,3,58	0/0:7,0:7:3.01:0,3,79	0/0:11,0:11:9.03:0,9,204	./.	1/1:15,3:18:2.17:217,2,0	1/1:3,0:3:2.99:24,3,0	1/1:4,0:4:7.80:85,8,0
chr10	38867371	.	GT	G	2962.55	PASS	AB=0.815;AC=34;AF=0.607;AN=56;BaseQRankSum=5.723;DP=569;FS=5.635;HRun=14;HaplotypeScore=83.6675;InbreedingCoeff=0.4057;MQ=64.65;MQ0=3;MQRankSum=2.990;QD=6.73;ReadPosRankSum=2.341;VQSLOD=2.9293;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:29,2:31:39.54:40,0,269	0/1:4,8:12:1.54:102,0,2	0/0:14,0:8:7.48:0,7,44	0/1:12,0:8:3.98:4,0,59	0/1:6,11:18:1.10:194,0,1	0/0:20,1:23:24.94:0,25,361	0/0:13,0:13:29.44:0,29,243	0/1:23,10:33:16.40:224,0,16	1/1:10,18:29:32.46:212,32,0	0/1:17,3:20:24.73:25,0,197	0/0:14,0:14:30.54:0,31,288	0/0:18,0:18:45.29:0,45,382	1/1:7,8:15:15.97:118,16,0	1/1:5,13:18:14.65:118,15,0	1/1:8,15:23:15.58:244,16,0	1/1:2,12:15:28.50:190,29,0	1/1:6,16:22:3.96:178,4,0	0/1:24,2:26:25.09:25,0,304	1/1:16,16:32:3.01:304,3,0	1/1:6,11:18:34.72:231,35,0	1/1:5,10:15:16.89:109,17,0	0/1:10,3:13:47.62:52,0,48	0/0:19,0:21:32.78:0,33,262	0/0:26,0:26:37.90:0,38,340	1/1:10,6:18:8.47:105,8,0	1/1:5,19:25:9.71:288,10,0	1/1:7,20:26:38.61:267,39,0	1/1:4,13:16:15.83:123,16,0
chr10	38868397	.	GA	G	6582.88	PASS	AB=0.786;AC=34;AF=0.607;AN=56;BaseQRankSum=9.144;DP=496;FS=12.391;HRun=9;HaplotypeScore=49.3002;InbreedingCoeff=0.8723;MQ=72.62;MQ0=0;MQRankSum=-1.417;QD=20.19;ReadPosRankSum=1.785;VQSLOD=4.3389;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:66.20:0,66,761	1/1:0,12:12:35.97:321,36,0	0/0:9,0:9:15.01:0,15,152	0/0:10,0:10:14.37:0,14,202	1/1:5,16:21:45.01:411,45,0	0/0:23,0:23:51.15:0,51,589	0/0:16,0:16:45.13:0,45,519	1/1:5,21:26:62.91:556,63,0	1/1:7,12:19:33:302,33,0	0/0:33,0:33:69.19:0,69,782	0/0:16,0:16:30.09:0,30,342	0/0:13,0:13:33.09:0,33,371	1/1:3,19:22:54.03:494,54,0	0/1:4,5:9:16.61:119,0,17	1/1:2,14:16:42.01:384,42,0	1/1:3,11:14:29.76:259,30,0	1/1:4,19:23:41.95:375,42,0	0/1:12,1:13:0.39:0,0,250	1/1:3,26:29:78.02:706,78,0	1/1:3,20:23:57.03:521,57,0	1/1:2,14:16:39.02:357,39,0	1/1:3,9:12:27.01:247,27,0	0/0:19,1:20:45.12:0,45,510	0/0:7,0:7:21.06:0,21,242	1/1:1,22:23:60.03:549,60,0	1/1:4,15:20:15.42:377,15,0	1/1:3,22:25:57.02:522,57,0	1/1:0,3:3:9:82,9,0
chr10	38868637	.	T	TC	96.42	PASS	AB=0.787;AC=3;AF=0.056;AN=54;BaseQRankSum=1.050;DP=533;FS=0.998;HRun=0;HaplotypeScore=56.4509;InbreedingCoeff=0.2171;MQ=43.68;MQ0=55;MQRankSum=0.031;QD=2.01;ReadPosRankSum=0.375;VQSLOD=1.8520;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:36:79.05:0,79,585	0/0:5,0:5:14.88:0,15,111	0/0:34,0:6:8.07:0,8,84	0/0:32,0:5:5.64:0,6,26	0/0:33,0:33:71.98:0,72,482	0/0:24,0:23:49:0,49,385	0/0:20,0:18:46.86:0,47,354	0/0:30,0:23:63.14:0,63,436	0/0:12,0:9:23.79:0,24,170	0/0:24,0:23:60.09:0,60,486	0/0:19,0:19:54.45:0,54,398	0/1:14,0:13:4.40:75,0,4	./.	0/0:13,0:12:32.22:0,32,221	0/0:11,0:10:26.73:0,27,190	0/0:11,0:10:29.69:0,30,215	0/0:27,0:22:61.29:0,61,392	0/0:20,0:15:28.71:0,29,231	0/0:23,0:19:53.50:0,53,424	0/0:23,0:22:55.56:0,56,438	0/0:7,0:7:20.85:0,21,156	0/0:8,0:8:23.70:0,24,171	0/1:8,12:17:4.88:99,0,5	0/1:9,4:11:15.19:21,0,15	0/0:15,0:14:38.37:0,38,320	0/0:21,0:20:54.50:0,54,398	0/0:20,0:20:47.56:0,48,338	0/0:12,0:7:18.23:0,18,128
chr10	38870332	.	C	CT	1782.77	PASS	AB=0.828;AC=19;AF=0.339;AN=56;BaseQRankSum=-3.926;DP=533;FS=0.950;HRun=13;HaplotypeScore=71.2861;InbreedingCoeff=0.7260;MQ=77.03;MQ0=1;MQRankSum=-0.786;QD=9.48;ReadPosRankSum=-1.641;VQSLOD=2.6246;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:18:43.65:0,44,292	1/1:1,9:10:24.03:223,24,0	0/0:27,0:19:12.86:0,13,134	0/1:21,0:17:4.94:5,0,66	1/1:3,16:21:47.72:415,48,0	0/0:20,0:21:40.64:0,41,273	0/0:15,0:15:35.65:0,36,246	0/0:30,2:32:36.56:0,37,391	1/1:3,16:19:36.04:334,36,0	0/0:25,0:26:58.40:0,58,396	0/0:19,0:20:35.48:0,35,245	0/0:19,0:19:14.92:0,15,223	1/1:10,8:18:7.01:193,7,0	1/1:9,10:21:0.11:120,0,0	1/1:1,9:10:12.01:111,12,0	1/1:9,7:18:34.32:268,34,0	0/1:4,10:15:1.23:192,0,1	0/0:20,0:23:47.59:0,48,299	0/0:19,0:20:37.58:0,38,247	0/1:16,3:20:38.12:38,0,153	0/0:5,0:4:8.88:0,9,59	1/1:6,8:14:8.99:78,9,0	0/0:25,3:28:25.05:0,25,312	0/0:9,0:10:20.82:0,21,144	0/0:19,0:20:29.60:0,30,238	0/0:24,0:24:37.59:0,38,252	0/0:26,0:28:44.23:0,44,343	0/0:9,0:9:14.84:0,15,103
chr10	38871426	.	TTGTG	T	273.68	PASS	AB=0.917;AC=13;AF=0.250;AN=52;BaseQRankSum=1.611;DP=588;FS=0.000;HRun=0;HaplotypeScore=122.0705;InbreedingCoeff=0.4438;MQ=54.87;MQ0=17;MQRankSum=-1.437;QD=1.62;ReadPosRankSum=1.020;VQSLOD=2.1881;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:20:7.25:52,7,0	0/0:8,0:8:12.03:0,12,190	./.	./.	0/0:18,0:17:8.95:0,9,165	0/1:20,0:20:12.28:42,0,12	0/0:16,0:17:5.75:0,6,46	0/0:24,0:21:0.89:0,1,2	0/0:25,0:27:15.05:0,15,287	0/0:20,0:20:7.45:0,7,66	1/1:20,4:23:2.96:20,3,0	1/1:7,0:11:12.01:112,12,0	0/0:11,0:12:4.26:0,4,55	0/0:17,0:18:9.01:0,9,128	0/0:22,0:24:6.49:0,6,115	0/0:13,0:13:6.49:0,6,104	0/0:31,0:31:3.47:0,3,55	0/1:14,6:20:57.11:77,0,57	0/1:35,0:34:2.92:3,0,276	0/0:14,0:22:16.12:0,16,223	0/0:33,0:32:15.03:0,15,262	0/0:20,0:20:5.69:0,6,76	1/1:6,0:13:6.01:56,6,0	1/1:25,0:24:6:60,6,0	0/0:23,0:22:24.06:0,24,419	0/0:31,0:27:25.50:0,25,400	0/0:20,0:21:23.63:0,24,461	0/0:17,0:16:18.06:0,18,355
chr10	38872133	.	T	TTG	282.65	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-0.109;DP=474;FS=1.827;HRun=0;HaplotypeScore=94.8111;InbreedingCoeff=0.7332;MQ=64.71;MQ0=20;MQRankSum=2.335;QD=13.46;ReadPosRankSum=0.278;VQSLOD=3.2314;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:28.79:0,29,259	0/0:3,0:3:5.75:0,6,46	0/0:83,0:17:17.04:0,17,161	0/0:73,0:18:24.31:0,24,190	0/0:19,0:19:46.34:0,46,423	0/0:13,0:13:5.78:0,6,119	0/0:3,0:3:0.47:0,0,1	0/0:20,0:20:24.50:0,25,180	0/0:7,0:6:6:0,6,55	0/0:18,0:18:49.66:0,50,396	0/0:23,0:22:34.51:0,35,298	1/1:0,7:7:6.02:72,6,0	0/0:10,0:10:14.86:0,15,125	0/0:6,0:6:9.02:0,9,89	0/0:9,0:9:15.73:0,16,126	0/0:12,0:11:25.65:0,26,222	0/0:16,0:15:12.35:0,12,134	0/0:16,0:16:29.91:0,30,262	0/0:8,0:8:14.78:0,15,98	0/0:14,0:14:35.69:0,36,320	0/0:5,0:5:10.79:0,11,79	0/0:4,0:4:11.96:0,12,100	1/1:1,8:9:18.26:219,18,0	1/1:5,0:5:14.55:120,15,0	0/0:19,0:19:50.66:0,51,454	0/0:37,0:35:58.53:0,59,559	0/0:14,0:14:19.81:0,20,207	0/0:9,0:9:6.39:0,6,152
chr10	38872136	.	TTTTTTTTTTA	T	4875.96	PASS	AB=0.997;AC=28;AF=0.500;AN=56;BaseQRankSum=4.941;DP=479;FS=0.000;HRun=0;HaplotypeScore=124.7627;InbreedingCoeff=0.3499;MQ=63.68;MQ0=19;MQRankSum=-4.185;QD=21.96;ReadPosRankSum=4.058;VQSLOD=3.6566;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:31.91:0,32,1186	1/1:2,0:3:9.03:134,9,0	0/0:85,0:20:42.09:0,42,586	0/0:72,0:17:43.72:0,44,404	1/1:18,1:19:43.97:727,44,0	0/0:12,0:12:19.42:0,19,525	0/0:3,0:3:3.01:0,3,59	1/1:26,0:26:27.12:501,27,0	1/1:6,0:5:3.01:51,3,0	0/0:19,0:19:51.18:0,51,1678	0/0:22,0:21:45.15:0,45,1703	0/0:7,0:7:6.02:0,6,178	1/1:10,0:10:1.67:141,2,0	1/1:6,0:6:7.84:107,8,0	1/1:10,0:10:14.90:242,15,0	1/1:11,1:11:20.35:350,20,0	0/1:16,0:15:4.71:168,0,5	0/0:16,0:16:30.10:0,30,1133	0/1:9,0:9:18.60:123,0,19	1/1:12,1:13:23.61:435,24,0	0/1:5,0:5:41.86:42,0,103	0/1:3,0:3:5.24:27,0,5	0/0:9,0:9:18.53:0,19,590	0/1:5,0:5:22.07:22,0,255	0/1:20,0:20:50.89:397,0,51	0/1:35,1:34:99:819,0,218	0/1:14,0:14:36.62:223,0,37	1/1:9,0:9:21.05:367,21,0
chr10	38872137	.	TTTTTTTTTA	T	7152.79	PASS	AB=0.717;AC=32;AF=0.571;AN=56;BaseQRankSum=0.280;DP=447;FS=0.000;HRun=0;HaplotypeScore=102.3516;InbreedingCoeff=0.5866;MQ=63.04;MQ0=19;MQRankSum=-2.862;QD=36.68;ReadPosRankSum=2.385;VQSLOD=4.5292;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:31.02:0,31,1043	1/1:2,1:3:9.03:170,9,0	0/0:81,0:18:37.81:0,38,503	0/0:71,0:17:34.40:0,34,313	1/1:3,15:18:50.97:1090,51,0	0/0:12,0:12:0.04:0,0,424	0/0:3,0:3:3.01:0,3,39	1/1:0,23:23:68.87:701,69,0	1/1:1,5:5:3.01:79,3,0	0/0:19,0:19:51.17:0,51,1564	0/0:22,0:21:45.15:0,45,1576	0/0:7,0:7:6.02:0,6,163	1/1:1,7:8:9.03:234,9,0	1/1:1,5:6:9.03:189,9,0	1/1:0,9:9:15.05:381,15,0	1/1:1,9:9:20.75:496,21,0	1/1:3,10:12:12.04:236,12,0	0/0:16,0:16:30.10:0,30,1037	1/1:1,6:7:17.97:202,18,0	1/1:1,9:10:24.08:609,24,0	0/1:3,2:5:69.74:70,0,71	1/1:2,0:2:5.93:78,6,0	0/0:9,0:9:18.53:0,19,537	0/1:5,0:5:1.89:2,0,204	0/1:4,11:15:14.97:651,0,15	0/1:9,25:32:99:1174,0,133	1/1:2,10:12:11.09:366,11,0	1/1:5,4:9:21.05:424,21,0
chr10	38872138	.	TTTTTTTTA	T	5812.61	PASS	AB=0.980;AC=33;AF=0.589;AN=56;BaseQRankSum=2.242;DP=439;FS=0.000;HRun=0;HaplotypeScore=100.6159;InbreedingCoeff=0.5791;MQ=63.38;MQ0=19;MQRankSum=-3.573;QD=28.92;ReadPosRankSum=2.220;VQSLOD=4.1653;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:33.67:0,34,953	1/1:2,1:3:9.03:168,9,0	0/0:79,0:17:34.75:0,35,413	0/0:70,0:17:40.87:0,41,271	1/1:16,2:18:51.10:925,51,0	0/1:12,0:12:2.52:3,0,333	0/0:3,0:3:3.01:0,3,39	1/1:23,0:23:68.83:624,69,0	1/1:6,0:5:3.01:60,3,0	0/0:19,0:19:51.17:0,51,1428	0/0:22,0:21:45.15:0,45,1424	0/0:6,0:6:6.02:0,6,136	1/1:8,0:8:9.03:176,9,0	1/1:6,0:6:9.03:158,9,0	1/1:9,0:9:15.05:285,15,0	1/1:10,0:9:21.01:376,21,0	1/1:13,0:12:12.02:175,12,0	0/0:17,0:17:33.10:0,33,956	1/1:7,0:7:17.92:163,18,0	1/1:10,0:10:24.08:469,24,0	0/1:4,0:4:39.73:54,0,40	1/1:2,0:2:1.93:42,2,0	0/0:9,0:9:18.53:0,19,464	0/1:3,0:3:2.22:2,0,154	0/1:12,0:13:3.95:481,0,4	0/1:32,1:31:99:954,0,105	1/1:11,1:12:11.14:316,11,0	1/1:8,1:9:21.05:381,21,0
chr10	38872859	.	C	CAG	656.42	PASS	AB=0.929;AC=31;AF=0.554;AN=56;BaseQRankSum=5.941;DP=491;FS=7.875;HRun=0;HaplotypeScore=100.9480;InbreedingCoeff=0.3656;MQ=75.68;MQ0=16;MQRankSum=0.115;QD=2.00;ReadPosRankSum=-1.742;VQSLOD=0.4527;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:60.12:0,60,845	0/0:3,0:3:0.40:0,0,1	0/0:28,0:19:56.55:0,57,847	0/0:34,0:24:66.02:0,66,863	1/1:12,0:12:2.93:43,3,0	1/1:15,0:14:1.70:18,2,0	1/1:9,0:7:1.34:14,1,0	1/1:18,0:17:13.19:91,13,0	0/1:12,2:14:2.79:80,0,3	0/0:21,0:21:56.69:0,57,796	0/0:12,0:12:33.11:0,33,513	1/1:18,0:18:3.11:34,3,0	1/1:7,10:20:9.29:112,9,0	0/1:16,0:16:21.27:30,0,21	1/1:11,0:27:2.30:25,2,0	0/1:6,6:15:17.55:38,0,18	1/1:18,0:18:9.74:113,10,0	0/0:15,0:14:42.10:0,42,556	0/1:16,0:16:2.08:7,0,2	0/0:10,0:13:7.21:0,7,25	0/1:35,0:33:1.19:21,0,1	1/1:18,0:19:4.33:25,4,0	1/1:20,0:19:6.69:56,7,0	1/1:21,0:21:12.10:82,12,0	1/1:2,1:11:0.47:1,0,0	0/1:17,0:17:20.38:20,0,46	0/0:15,0:17:12.47:0,12,39	0/1:4,0:4:2.44:16,0,2
chr10	38874460	.	CT	C	5040.99	PASS	AB=0.729;AC=39;AF=0.696;AN=56;BaseQRankSum=2.748;DP=713;FS=0.372;HRun=14;HaplotypeScore=91.0870;InbreedingCoeff=0.6712;MQ=79.43;MQ0=3;MQRankSum=-1.819;QD=9.57;ReadPosRankSum=4.764;VQSLOD=4.3975;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,1:31:38.54:0,39,549	1/1:2,8:10:10.41:96,10,0	0/1:47,3:29:48.83:67,0,49	0/0:39,0:26:1.28:0,1,128	1/1:12,17:33:15.84:271,16,0	0/0:18,1:19:24.40:0,24,354	0/0:21,0:23:50.04:0,50,477	1/1:13,11:27:17.58:194,18,0	1/1:4,14:23:45.85:276,46,0	0/0:19,1:36:49.67:0,50,420	0/0:7,0:24:55.19:0,55,338	1/1:5,14:21:14.85:231,15,0	1/1:6,10:19:5.01:154,5,0	1/1:5,16:24:52.53:331,53,0	1/1:6,22:33:29.85:307,30,0	1/1:6,16:26:46.79:291,47,0	1/1:5,18:28:45.86:276,46,0	0/0:9,0:13:26.13:0,26,169	1/1:9,2:13:27.80:172,28,0	1/1:9,17:28:20.60:267,21,0	1/1:6,17:24:43.63:292,44,0	1/1:5,21:31:29.80:310,30,0	0/1:8,10:20:20.67:143,0,21	1/1:6,17:29:10.10:309,10,0	0/1:8,8:21:15.65:165,0,16	1/1:10,18:32:58.31:361,58,0	1/1:4,13:19:39.77:258,40,0	1/1:0,12:16:43.86:270,44,0
chr10	38877171	.	TTAATGTCTTCTAAGA	T	13385.17	PASS	AB=0.552;AC=15;AF=0.268;AN=56;BaseQRankSum=15.730;DP=550;FS=1.318;HRun=0;HaplotypeScore=230.4866;InbreedingCoeff=0.8832;MQ=83.69;MQ0=1;MQRankSum=-12.911;QD=88.06;ReadPosRankSum=3.049;VQSLOD=4.1605;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:63.18:0,63,4056	0/0:7,0:7:21.07:0,21,1407	0/0:17,0:17:47.18:0,47,2822	0/0:21,0:20:60.21:0,60,4001	0/0:38,0:38:99:0,108,6823	0/0:17,0:17:48.16:0,48,3429	0/0:14,0:14:42.13:0,42,2935	1/1:9,13:22:36.11:1354,36,0	0/0:12,0:12:33.11:0,33,2262	0/0:25,0:25:69.24:0,69,4998	0/0:26,0:26:78.22:0,78,4598	0/0:12,0:12:36.12:0,36,2412	0/0:17,0:17:51.18:0,51,3805	0/0:25,0:25:72.25:0,72,5064	0/0:24,0:24:66.23:0,66,4680	0/0:18,0:18:54.19:0,54,3647	0/0:24,0:24:72.25:0,72,4993	0/0:13,0:13:39.13:0,39,2542	1/1:2,11:13:33.09:1240,33,0	1/1:7,22:28:57.20:2400,57,0	1/1:4,4:8:6.02:196,6,0	0/0:24,0:24:69.24:0,69,5019	0/0:31,0:31:90.31:0,90,6431	0/0:12,0:12:36.12:0,36,2590	1/1:2,13:15:36.12:1605,36,0	0/1:6,26:32:99:3111,0,281	1/1:2,24:26:66.23:2944,66,0	1/1:1,6:7:12.04:535,12,0
chr10	38882690	.	GT	G	1052.39	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.895;DP=606;FS=7.574;HRun=1;HaplotypeScore=49.6389;InbreedingCoeff=0.8903;MQ=52.85;MQ0=44;MQRankSum=1.932;QD=30.07;ReadPosRankSum=1.019;VQSLOD=2.7248;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,111,1739	0/0:15,0:14:39.12:0,39,599	0/0:36,0:1:3.01:0,3,48	0/0:48,0:5:9.50:0,10,144	0/0:30,0:30:87.30:0,87,1389	1/1:0,19:19:57.19:796,57,0	1/1:0,16:16:27.09:377,27,0	0/0:33,0:32:95.94:0,96,1413	0/0:23,0:23:66.21:0,66,1024	0/0:18,0:18:54.17:0,54,839	0/0:16,0:16:42.13:0,42,648	0/0:23,0:23:66.19:0,66,979	0/0:14,0:14:42.13:0,42,643	0/0:24,0:23:66.18:0,66,980	0/0:25,0:25:72.20:0,72,1100	0/0:16,0:16:48.16:0,48,767	0/0:32,0:32:90.27:0,90,1388	0/0:27,0:27:81.16:0,81,1189	0/0:12,0:10:24.04:0,24,355	0/0:15,0:14:39.12:0,39,597	0/0:14,0:14:42.10:0,42,619	0/0:12,0:12:36.12:0,36,573	0/0:13,0:13:36.10:0,36,548	0/0:24,0:24:72.22:0,72,1124	0/0:8,0:8:21.07:0,21,335	0/0:19,0:19:57.19:0,57,888	0/0:24,0:24:69.24:0,69,1101	0/0:12,0:12:36.12:0,36,570
chr10	38883024	.	G	GTT	5995.62	PASS	AB=0.800;AC=44;AF=0.786;AN=56;BaseQRankSum=0.596;DP=529;FS=1.827;HRun=13;HaplotypeScore=74.6070;InbreedingCoeff=0.6214;MQ=74.18;MQ0=7;MQRankSum=-1.216;QD=13.18;ReadPosRankSum=1.016;VQSLOD=3.8694;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:26:38.28:0,38,367	1/1:0,6:5:15.05:204,15,0	0/1:50,0:17:4.48:4,0,101	0/1:56,0:21:1.34:1,0,93	1/1:8,16:28:32.54:628,33,0	1/1:3,0:12:14.97:52,15,0	0/1:5,1:16:21.52:86,0,22	1/1:16,2:34:65.58:664,66,0	1/1:3,11:15:23.56:290,24,0	0/0:17,0:17:28.46:0,28,304	0/0:13,0:14:29.83:0,30,308	0/1:4,0:10:5.38:55,0,5	1/1:8,10:18:15.05:197,15,0	1/1:4,3:13:9.02:98,9,0	1/1:1,14:16:30.10:407,30,0	1/1:4,12:17:21.06:268,21,0	1/1:4,8:15:25.97:278,26,0	0/0:16,0:17:26.72:0,27,282	1/1:12,11:26:60.04:634,60,0	1/1:9,2:23:50.26:488,50,0	1/1:2,1:4:6.48:70,6,0	1/1:3,5:10:17.55:212,18,0	1/1:3,0:9:9.98:35,10,0	1/1:1,1:6:9.67:34,10,0	1/1:16,1:24:59.96:580,60,0	1/1:9,2:23:31.40:469,31,0	1/1:3,0:12:12.02:126,12,0	1/1:0,1:6:12.01:114,12,0
chr10	38883859	.	GGAAAAAAAAAAAAAAAA	G	163.15	PASS	AB=0.909;AC=3;AF=0.056;AN=54;BaseQRankSum=1.963;DP=345;FS=0.000;HRun=0;HaplotypeScore=102.3085;InbreedingCoeff=0.4222;MQ=38.85;MQ0=75;MQRankSum=-1.313;QD=7.42;ReadPosRankSum=2.369;VQSLOD=1.3925;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:21:30.10:0,30,2147	0/0:3,0:3:0:0,0,0	0/0:20,0:2:6.02:0,6,113	./.	0/0:8,0:3:1.55:0,2,4	0/0:11,0:11:18.06:0,18,1222	0/0:13,0:11:11.98:0,12,384	0/0:16,0:16:15.05:0,15,814	0/1:9,1:9:0.28:124,0,0	0/0:14,0:11:15.05:0,15,697	0/0:11,0:10:15.05:0,15,856	0/0:12,0:10:15.05:0,15,773	0/0:10,0:6:2.99:0,3,23	1/1:9,3:11:2.95:128,3,0	0/0:8,0:3:0:0,0,0	0/0:7,0:3:6.02:0,6,406	0/0:28,0:20:0:0,0,0	0/0:17,0:14:15.05:0,15,1020	0/0:14,0:12:17.83:0,18,968	0/0:7,0:4:9.03:0,9,612	0/0:9,0:5:3.01:0,3,189	0/0:7,0:5:3.11:0,3,8	0/0:6,0:5:6.02:0,6,354	0/0:11,0:9:12.23:0,12,410	0/0:9,0:9:9.03:0,9,604	0/0:16,0:12:15.05:0,15,972	0/0:7,0:4:9.03:0,9,362	0/0:14,0:9:17.85:0,18,965
chr10	38883874	.	A	AG	486.95	PASS	AB=0.919;AC=12;AF=0.214;AN=56;BaseQRankSum=-1.430;DP=404;FS=9.570;HRun=0;HaplotypeScore=50.6252;InbreedingCoeff=-0.2301;MQ=43.92;MQ0=85;MQRankSum=-0.534;QD=2.92;ReadPosRankSum=0.790;VQSLOD=1.2824;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:27:65.26:0,65,536	0/0:2,0:2:2.37:0,2,8	0/0:41,0:6:10.62:0,11,65	0/0:37,0:4:3:0,3,25	0/0:6,0:1:0.47:0,0,1	0/1:19,0:17:29.90:30,0,92	0/1:19,0:16:14.08:14,0,58	0/1:7,13:20:13.63:220,0,14	0/0:5,0:4:3.84:0,4,13	0/0:17,0:13:38.14:0,38,307	0/0:12,0:11:25.61:0,26,173	0/1:14,0:11:6.65:7,0,75	0/0:5,0:1:3:0,3,27	0/0:5,0:5:2.60:0,3,10	0/0:7,0:3:0:0,0,0	0/0:6,0:2:6.02:0,6,75	0/0:23,0:14:14.10:0,14,79	0/0:22,0:19:41.93:0,42,364	0/1:18,1:14:49.11:80,0,49	0/1:10,0:7:30.90:31,0,33	0/1:9,2:7:22.90:23,0,23	0/0:6,0:4:4.74:0,5,16	0/1:7,0:6:27.77:33,0,28	0/0:12,0:10:4.80:0,5,50	0/1:7,1:7:5.97:43,0,6	0/1:14,0:10:17.68:66,0,18	0/1:9,3:8:9.48:46,0,9	0/1:13,1:8:31.84:32,0,72
chr10	38884025	.	CTCTGTCTGTCTGTCTGTCTG	C	1377.77	PASS	AB=0.950;AC=22;AF=0.524;AN=42;BaseQRankSum=4.827;DP=249;FS=0.000;HRun=0;HaplotypeScore=121.7322;InbreedingCoeff=0.4151;MQ=71.66;MQ0=10;MQRankSum=-4.415;QD=13.25;ReadPosRankSum=0.076;VQSLOD=2.2617;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:20.55:0,21,1313	0/1:3,0:3:0:0,0,0	./.	0/0:27,0:18:7.58:0,8,195	./.	1/1:11,0:11:5.63:37,6,0	1/1:10,4:14:3.01:129,3,0	0/0:21,0:20:3:0,3,26	1/1:2,0:5:3.01:140,3,0	0/0:7,0:7:6.02:0,6,557	0/0:5,0:5:9.03:0,9,473	1/1:1,4:5:6.02:318,6,0	./.	./.	0/1:4,0:4:0:0,0,0	./.	1/1:3,0:9:6.02:268,6,0	0/0:12,0:13:30.10:0,30,1839	0/1:6,0:7:29.72:53,0,30	./.	0/1:19,0:18:8.06:8,0,18	1/1:1,0:3:6.02:259,6,0	1/1:7,6:13:0.36:1,0,0	1/1:4,5:9:2.90:159,3,0	1/1:0,0:1:3.01:140,3,0	0/0:10,0:9:9.02:0,9,294	./.	0/0:9,0:9:5.98:0,6,47
chr10	38887064	.	C	CTCAGGCCA	47750.65	PASS	AB=0.596;AC=43;AF=0.768;AN=56;BaseQRankSum=0.693;DP=791;FS=3.585;HRun=0;HaplotypeScore=257.2234;InbreedingCoeff=0.9047;MQ=73.70;MQ0=0;MQRankSum=-18.577;QD=78.80;ReadPosRankSum=-1.687;VQSLOD=4.6131;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:63,0:63:99:0,187,5512	1/1:3,0:19:45.15:1591,45,0	0/0:26,0:26:75.24:0,75,2037	0/0:22,0:22:65.49:0,65,1669	1/1:7,0:30:39.13:1554,39,0	1/1:11,0:24:66.22:1900,66,0	1/1:12,0:28:69.19:2152,69,0	1/1:16,0:28:75.25:2548,75,0	1/1:9,0:34:53.27:2555,53,0	0/0:31,0:31:90.23:0,90,2438	0/0:20,0:20:60.21:0,60,1791	1/1:17,0:41:89.28:3645,89,0	1/1:4,0:26:72.21:2729,72,0	1/1:6,0:17:48.08:1605,48,0	1/1:10,0:40:96.32:3525,96,0	1/1:13,0:42:99:3876,108,0	1/1:12,0:28:57.19:2170,57,0	0/0:23,0:23:69.24:0,69,2049	1/1:12,0:23:63.19:2053,63,0	1/1:8,0:22:39.09:1228,39,0	1/1:12,1:27:14.13:1276,14,0	0/1:9,0:28:9.81:1867,0,10	1/1:11,0:22:27.05:968,27,0	1/1:11,0:31:54.52:1854,55,0	1/1:6,0:25:35.21:2211,35,0	1/1:8,0:31:67.17:2778,67,0	1/1:8,0:32:78.22:2774,78,0	1/1:0,0:8:24.08:892,24,0
chr10	38887083	.	TTCAGTCTTTTGCTC	T	8684.67	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=8.177;DP=769;FS=3.385;HRun=0;HaplotypeScore=389.0932;InbreedingCoeff=0.9989;MQ=77.45;MQ0=0;MQRankSum=-9.680;QD=67.32;ReadPosRankSum=3.589;VQSLOD=3.8356;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:67,0:67:99:0,184,12060	0/0:15,0:15:33.11:0,33,2084	0/0:28,0:28:75.25:0,75,3809	0/0:21,0:21:48.21:0,48,2685	0/0:38,0:38:96.33:0,96,4721	1/1:4,15:19:45.15:1801,45,0	1/1:6,21:27:42.14:1712,42,0	0/0:33,0:33:90.31:0,90,5236	0/0:34,0:34:78.27:0,78,4680	0/0:33,0:32:99:0,99,6379	0/0:22,0:22:63.22:0,63,3755	1/1:5,29:34:75.26:3147,75,0	0/0:30,0:30:81.28:0,81,5020	0/0:13,0:13:36.12:0,36,2096	0/0:34,0:34:66.23:0,66,3701	0/0:37,0:37:93.32:0,93,5965	0/0:30,0:30:66.23:0,66,3089	0/0:22,0:22:63.22:0,63,4109	0/0:22,0:22:60.21:0,60,3559	0/0:16,0:16:45.15:0,45,2622	0/0:25,0:25:48.16:0,48,2112	0/0:25,0:25:75.26:0,75,3892	1/1:2,17:19:33.03:1204,33,0	1/1:8,22:30:22.57:821,23,0	0/0:23,0:23:48.16:0,48,2200	0/0:28,0:28:84.29:0,84,5518	0/0:34,0:34:93.32:0,93,6146	0/0:10,0:10:27.09:0,27,1398
chr10	38887841	.	GTCTC	G	1764.15	PASS	AB=0.888;AC=36;AF=0.692;AN=52;BaseQRankSum=9.610;DP=464;FS=23.631;HRun=0;HaplotypeScore=134.2019;InbreedingCoeff=0.4248;MQ=54.20;MQ0=8;MQRankSum=-5.749;QD=5.92;ReadPosRankSum=2.425;VQSLOD=1.1371;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:56.42:0,56,1700	1/1:6,2:8:11.96:116,12,0	0/0:16,0:8:4.25:0,4,92	0/0:20,0:10:7.06:0,7,169	1/1:11,2:14:14.95:140,15,0	1/1:10,0:9:2.98:22,3,0	1/1:14,0:14:8.98:87,9,0	0/1:26,0:24:34.38:313,0,34	1/1:8,2:12:2.84:14,3,0	0/0:25,0:24:66.21:0,66,1472	0/0:17,0:17:45.15:0,45,1099	1/1:16,0:16:11.73:107,12,0	1/1:8,6:12:24.05:284,24,0	1/1:12,5:17:3.01:30,3,0	0/1:14,7:21:0:0,0,0	1/1:14,5:20:1.34:11,1,0	0/1:14,4:16:55.16:176,0,55	0/0:21,0:21:48.15:0,48,1134	1/1:19,0:12:1.02:57,1,0	1/1:13,1:14:8.79:63,9,0	./.	1/1:12,3:15:11.73:92,12,0	1/1:9,0:9:4.80:29,5,0	./.	1/1:7,0:7:3.01:34,3,0	0/1:15,0:14:11.50:115,0,11	1/1:20,1:19:32:223,32,0	1/1:6,0:6:2.88:15,3,0
chr10	38887845	.	C	CTG	3513.31	PASS	AB=0.736;AC=35;AF=0.673;AN=52;BaseQRankSum=6.607;DP=449;FS=24.378;HRun=0;HaplotypeScore=119.0309;InbreedingCoeff=0.5425;MQ=52.43;MQ0=10;MQRankSum=-6.465;QD=12.92;ReadPosRankSum=-0.702;VQSLOD=1.5729;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:75.90:0,76,1161	1/1:7,1:8:11.90:85,12,0	0/0:16,0:8:16.35:0,16,176	0/0:18,0:9:9.63:0,10,199	1/1:15,1:16:16.83:200,17,0	1/1:2,8:9:3.01:54,3,0	1/1:9,5:14:9.03:164,9,0	0/1:12,19:28:69.84:644,0,70	1/1:8,3:11:5.95:43,6,0	0/0:24,0:23:66.21:0,66,966	0/0:16,0:16:45.15:0,45,687	1/1:1,13:14:11.80:175,12,0	1/1:10,2:11:23.51:196,24,0	1/1:13,2:15:6.87:50,7,0	0/0:16,3:19:0:0,0,0	1/1:16,3:18:6.83:45,7,0	0/1:12,4:14:22.07:170,0,22	0/0:21,0:21:48.15:0,48,698	1/1:15,4:11:12.13:277,12,0	1/1:12,3:14:15.02:206,15,0	./.	1/1:11,3:14:15.02:171,15,0	1/1:1,8:9:6.02:110,6,0	./.	1/1:0,7:7:3.01:51,3,0	0/1:11,4:14:29.74:299,0,30	1/1:15,6:19:35.89:488,36,0	1/1:1,5:6:8.88:85,9,0
chr10	38887857	.	GTC	G	163.99	PASS	AB=0.868;AC=18;AF=0.346;AN=52;BaseQRankSum=7.329;DP=412;FS=18.145;HRun=0;HaplotypeScore=122.9105;InbreedingCoeff=0.2664;MQ=43.39;MQ0=14;MQRankSum=-4.304;QD=1.15;ReadPosRankSum=3.082;VQSLOD=1.3332;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:82.67:0,83,1244	1/1:2,3:5:8.10:53,8,0	0/0:10,0:3:5.60:0,6,26	0/0:13,0:6:3.01:0,3,43	0/1:13,3:16:0.37:0,0,20	0/0:10,0:9:2.92:0,3,17	0/0:10,0:10:0.70:0,1,13	0/0:37,0:30:51.36:0,51,329	1/1:6,4:10:0.89:2,1,0	0/0:27,0:26:69.21:0,69,1071	0/0:18,0:18:48.15:0,48,754	1/1:10,0:10:5.75:17,6,0	0/1:6,6:11:15.75:102,0,16	1/1:5,5:10:2.90:16,3,0	0/0:12,8:20:0:0,0,0	1/1:7,7:13:0.46:1,0,0	0/1:8,6:12:38.68:59,0,39	0/0:24,0:24:60.20:0,60,956	0/0:15,0:5:10.07:0,10,75	./.	0/1:16,0:15:0:0,0,0	1/1:12,3:16:4.35:27,4,0	0/1:7,0:7:7.61:8,0,27	./.	0/0:6,0:5:0:0,0,0	0/1:12,0:11:10.02:10,0,37	0/0:19,0:17:7.58:0,8,27	0/0:6,0:6:3.44:0,3,27
chr10	38887869	.	CTG	C	301.41	PASS	AB=0.985;AC=15;AF=0.278;AN=54;BaseQRankSum=6.462;DP=384;FS=36.536;HRun=0;HaplotypeScore=109.5276;InbreedingCoeff=0.1020;MQ=41.56;MQ0=20;MQRankSum=-6.553;QD=1.93;ReadPosRankSum=-2.542;VQSLOD=0.2431;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:40:65.38:0,65,1417	0/1:4,0:4:6.53:7,0,9	0/1:4,0:3:1.03:1,0,8	0/0:4,0:1:2.94:0,3,18	0/0:17,0:16:1.78:0,2,5	0/0:11,0:10:2.87:0,3,25	0/0:6,0:6:1.85:0,2,17	0/1:35,0:27:63.11:63,0,340	0/0:6,0:6:2.88:0,3,15	0/0:27,0:25:63.19:0,63,1138	0/0:19,1:18:45.08:0,45,754	0/1:7,1:8:14.01:14,0,15	0/1:13,0:11:3.77:27,0,4	0/0:9,0:8:0.47:0,0,1	0/0:22,0:22:1.82:0,2,5	0/0:13,0:12:6.29:0,6,33	0/1:9,0:7:16.68:17,0,54	0/0:25,0:25:63.14:0,63,1093	0/1:17,0:8:25.83:26,0,54	0/1:16,0:13:0:0,0,0	0/1:16,1:14:0:0,0,0	0/0:15,0:15:2.80:0,3,14	0/0:5,0:5:3.01:0,3,39	./.	0/1:5,0:4:0:0,0,0	1/1:7,1:7:16.78:123,17,0	1/1:14,0:13:17.53:95,18,0	0/1:5,0:5:20.41:62,0,20
chr10	38887881	.	CTG	C	603.58	PASS	AB=0.921;AC=23;AF=0.500;AN=46;BaseQRankSum=7.818;DP=377;FS=26.534;HRun=0;HaplotypeScore=103.3720;InbreedingCoeff=0.2014;MQ=36.57;MQ0=19;MQRankSum=-6.091;QD=2.94;ReadPosRankSum=-1.958;VQSLOD=0.1187;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:37:66.90:0,67,1452	1/1:2,3:5:9.02:116,9,0	./.	./.	0/0:15,4:18:3.01:0,3,57	0/1:10,0:9:0:0,0,0	1/1:6,0:6:4.76:23,5,0	0/1:40,0:33:4.64:5,0,466	0/1:8,0:7:0:0,0,0	0/0:28,0:26:72.10:0,72,1230	0/0:15,0:13:33.10:0,33,602	1/1:9,0:9:1.40:29,1,0	0/1:6,8:12:24.11:179,0,24	1/1:6,7:12:2.99:23,3,0	0/0:14,8:22:1.82:0,2,5	1/1:5,8:13:6.06:90,6,0	0/1:7,4:9:95.55:96,0,96	0/0:24,0:24:42.20:0,42,1053	0/1:14,0:7:1.70:2,0,167	./.	0/1:17,0:13:0:0,0,0	0/1:9,4:13:0:0,0,0	./.	./.	0/1:6,0:5:0:0,0,0	0/1:10,0:9:60.29:60,0,86	1/1:9,1:9:7.46:68,7,0	0/1:6,0:6:41.64:42,0,42
chr10	38887897	.	CTG	C	177.65	PASS	AB=0.958;AC=16;AF=0.348;AN=46;BaseQRankSum=6.936;DP=442;FS=6.287;HRun=0;HaplotypeScore=112.5072;InbreedingCoeff=0.1537;MQ=34.89;MQ0=31;MQRankSum=-6.044;QD=0.98;ReadPosRankSum=-3.993;VQSLOD=0.3661;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:36:84.23:0,84,1451	1/1:9,0:8:9.25:30,9,0	./.	./.	0/0:20,0:18:3.01:0,3,55	1/1:14,0:12:1.32:3,1,0	1/1:6,0:4:1.82:5,2,0	0/1:34,0:25:99:120,0,357	0/0:10,0:9:0.47:0,0,1	0/0:29,0:26:74.87:0,75,1232	0/0:18,0:16:36.08:0,36,605	0/1:13,0:13:6.38:6,0,8	1/1:16,0:14:0.16:41,0,0	0/0:19,0:17:2.82:0,3,17	0/0:21,0:21:2.04:0,2,6	0/1:23,0:21:6.72:24,0,7	0/1:19,0:16:1.57:2,0,103	0/0:30,0:30:72.07:0,72,1141	0/0:22,0:11:2.79:0,3,172	./.	0/1:14,2:11:0:0,0,0	./.	0/0:5,0:5:0:0,0,0	./.	0/1:9,0:7:0:0,0,0	0/0:15,0:13:12.58:0,13,255	0/1:11,2:11:25.77:29,0,26	0/1:9,1:8:34.13:34,0,77
chr10	38887903	.	C	CTG	139.42	PASS	AB=0.975;AC=8;AF=0.167;AN=48;BaseQRankSum=0.349;DP=442;FS=5.849;HRun=0;HaplotypeScore=112.1544;InbreedingCoeff=0.2006;MQ=34.33;MQ0=34;MQRankSum=-4.755;QD=1.24;ReadPosRankSum=-1.291;VQSLOD=1.5030;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:36:81.06:0,81,1071	0/0:8,0:7:3.53:0,4,24	./.	./.	0/0:19,0:16:2.97:0,3,20	0/1:14,0:12:0:0,0,1	0/0:7,0:5:1.25:0,1,3	0/1:24,5:20:99:202,0,237	0/0:9,0:8:0.89:0,1,2	0/0:31,0:27:78.17:0,78,1025	0/0:16,0:14:27.06:0,27,344	0/1:18,0:18:3.49:3,0,11	0/0:14,0:12:7.58:0,8,59	0/0:20,0:17:2.88:0,3,42	0/0:20,0:20:2.74:0,3,12	0/0:23,0:21:13.76:0,14,90	0/0:17,0:14:14.54:0,15,139	0/0:29,0:29:72.17:0,72,937	0/0:19,0:9:15.01:0,15,184	./.	0/0:15,0:11:0:0,0,0	./.	0/0:3,0:3:0:0,0,0	1/1:13,0:12:2.22:7,2,0	0/1:10,0:8:0:0,0,0	0/1:18,0:15:2.36:2,0,315	0/0:12,0:12:11.70:0,12,75	0/1:10,0:8:16.25:16,0,101
chr10	38887915	.	CTG	C	535.48	PASS	AB=0.862;AC=17;AF=0.386;AN=44;BaseQRankSum=7.219;DP=450;FS=0.000;HRun=0;HaplotypeScore=91.9843;InbreedingCoeff=0.2400;MQ=33.20;MQ0=40;MQRankSum=-6.168;QD=2.99;ReadPosRankSum=-2.062;VQSLOD=1.7518;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:33:78.19:0,78,1305	1/1:3,5:7:8.06:95,8,0	./.	./.	./.	1/1:9,5:11:2.02:5,2,0	0/1:9,3:10:0.28:0,0,6	0/0:20,0:13:17.97:0,18,134	0/0:8,5:12:1.82:0,2,5	0/0:31,0:25:74.80:0,75,1286	0/0:14,0:12:24.02:0,24,378	0/1:11,9:19:10.24:10,0,28	1/1:5,9:12:15.59:142,16,0	0/0:10,11:17:2.91:0,3,54	1/1:3,13:16:3.01:33,3,0	1/1:8,14:20:15.94:228,16,0	0/1:12,4:12:5.27:5,0,158	0/0:30,0:30:69.09:0,69,1140	0/0:20,0:10:0.76:0,1,142	./.	./.	./.	0/0:3,1:4:3.01:0,3,54	0/0:11,3:12:1.55:0,2,4	0/1:14,0:11:0:0,0,0	0/1:18,2:17:99:99,0,147	0/1:12,3:12:10.61:28,0,11	0/1:8,0:6:23.96:24,0,42
chr10	38887927	.	CTG	C	76.74	PASS	AB=0.974;AC=18;AF=0.391;AN=46;BaseQRankSum=7.561;DP=503;FS=2.646;HRun=0;HaplotypeScore=102.8485;InbreedingCoeff=0.2467;MQ=32.36;MQ0=34;MQRankSum=-7.181;QD=0.31;ReadPosRankSum=-0.550;VQSLOD=1.7656;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,1:34:72.21:0,72,1315	1/1:11,0:9:7.68:25,8,0	./.	./.	./.	0/0:14,0:12:0.20:0,0,0	0/1:12,0:11:8.48:11,0,8	0/0:17,0:11:23.64:0,24,268	0/0:14,2:15:4.92:0,5,49	0/0:28,2:24:69.18:0,69,1211	0/0:12,0:12:27.05:0,27,449	0/1:25,0:24:9.88:13,0,10	0/1:14,2:13:1.67:2,0,6	0/1:21,1:18:0.33:1,0,0	1/1:25,1:22:4.96:18,5,0	1/1:25,0:23:13.88:50,14,0	0/0:22,0:17:13.55:0,14,140	0/0:29,0:29:69.18:0,69,1168	0/1:16,0:9:12.25:12,0,128	1/1:14,0:11:0.47:1,0,0	./.	./.	0/0:9,0:6:3.01:0,3,53	1/1:20,0:17:1.55:4,2,0	0/1:18,1:16:0:0,0,0	0/1:22,0:19:22.41:22,0,133	0/1:22,0:18:37.82:49,0,38	0/0:6,0:4:2.90:0,3,46
chr10	38887929	.	GTCTC	G	108.74	PASS	AB=0.878;AC=15;AF=0.326;AN=46;BaseQRankSum=6.116;DP=511;FS=11.336;HRun=0;HaplotypeScore=109.9826;InbreedingCoeff=0.1737;MQ=31.98;MQ0=36;MQRankSum=-4.664;QD=0.49;ReadPosRankSum=-2.554;VQSLOD=1.0497;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:34:72.18:0,72,1644	1/1:8,2:9:7.58:30,8,0	./.	./.	./.	0/1:13,0:13:0:0,0,1	0/0:14,0:11:2.93:0,3,26	0/0:15,0:8:21.02:0,21,250	0/0:10,4:15:5.23:0,5,48	0/0:30,0:24:51.18:0,51,1460	0/0:11,0:11:30.07:0,30,540	0/1:21,0:24:8.83:46,0,9	0/1:10,4:12:4.33:36,0,4	1/1:16,5:19:5.15:23,5,0	1/1:22,5:23:2.66:8,3,0	0/1:17,6:23:41.81:54,0,42	0/1:15,3:17:10.91:11,0,136	0/0:29,0:29:66.16:0,66,1498	0/0:20,0:11:1.08:0,1,179	1/1:14,0:12:2.37:8,2,0	./.	./.	0/0:9,0:6:2.96:0,3,19	0/0:18,0:17:0.89:0,1,2	0/0:19,0:16:0:0,0,0	0/1:22,1:20:12.12:12,0,348	0/1:22,1:19:8.58:9,0,45	0/0:6,0:4:8.96:0,9,69
chr10	38887931	.	C	CTG	137.68	PASS	AB=0.979;AC=11;AF=0.239;AN=46;BaseQRankSum=2.472;DP=529;FS=17.734;HRun=0;HaplotypeScore=106.9392;InbreedingCoeff=0.2120;MQ=31.66;MQ0=36;MQRankSum=-3.527;QD=0.79;ReadPosRankSum=-1.411;VQSLOD=0.8656;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:33:69.10:0,69,1008	0/0:10,0:8:3.54:0,4,20	./.	./.	./.	1/1:15,2:15:1.17:2,1,0	1/1:12,5:11:4.89:48,5,0	0/0:15,0:8:15.42:0,15,255	0/0:17,0:16:5.23:0,5,51	0/0:32,0:26:66.10:0,66,942	0/0:12,0:12:27.08:0,27,392	0/1:22,3:24:14.63:140,0,15	0/0:15,0:12:5.55:0,6,30	0/1:25,0:20:14.07:24,0,14	0/0:27,0:23:5.37:0,5,40	0/0:27,0:24:18.07:0,18,113	0/1:23,0:17:13.16:13,0,112	0/0:28,0:28:63.17:0,63,916	0/0:21,0:13:18.71:0,19,204	0/0:13,0:11:0.89:0,1,2	./.	./.	0/0:10,0:7:2.80:0,3,13	1/1:17,5:17:1.82:5,2,0	0/1:22,0:19:0:0,0,0	0/0:24,0:21:27.41:0,27,459	0/1:23,0:19:19.83:20,0,96	0/0:6,0:4:11.97:0,12,116
chr10	38887933	.	CTG	C	1243.23	PASS	AB=0.818;AC=23;AF=0.500;AN=46;BaseQRankSum=7.701;DP=533;FS=4.321;HRun=0;HaplotypeScore=99.7531;InbreedingCoeff=0.2343;MQ=31.36;MQ0=37;MQRankSum=-8.795;QD=4.24;ReadPosRankSum=-1.286;VQSLOD=2.0401;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,1:32:63.22:0,63,1202	1/1:6,4:8:7.54:59,8,0	./.	./.	./.	0/0:11,7:16:1.01:0,1,3	1/1:16,1:11:4.94:37,5,0	0/1:15,0:8:4.51:5,0,98	0/0:12,5:16:4.72:0,5,38	0/0:32,0:26:72.15:0,72,1100	0/0:12,0:12:30.05:0,30,489	1/1:15,11:24:9.84:79,10,0	1/1:12,4:13:9.02:61,9,0	0/0:19,6:20:2.18:0,2,7	1/1:14,12:22:5.89:83,6,0	1/1:16,11:24:18.19:246,18,0	0/1:22,1:17:21.98:22,0,89	0/0:28,0:28:57.16:0,57,1007	0/1:17,3:12:92.90:93,0,125	1/1:9,4:11:1.25:3,1,0	./.	./.	0/0:4,6:7:2.98:0,3,22	1/1:18,5:17:1.55:4,2,0	0/1:16,6:19:0:0,0,0	0/1:14,11:22:99:449,0,144	0/1:16,8:20:18.82:196,0,19	0/1:3,3:4:38.02:52,0,38
chr10	38887935	.	GTC	G	593.04	PASS	AB=1.000;AC=21;AF=0.457;AN=46;BaseQRankSum=7.169;DP=556;FS=0.000;HRun=0;HaplotypeScore=104.8982;InbreedingCoeff=0.2219;MQ=30.88;MQ0=41;MQRankSum=-6.452;QD=1.94;ReadPosRankSum=0.152;VQSLOD=1.6940;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:32:66.21:0,66,1088	1/1:10,0:8:8.24:47,8,0	./.	./.	./.	0/0:20,0:19:1.55:0,2,5	1/1:16,2:12:1.24:36,1,0	0/0:14,0:8:6.87:0,7,133	0/0:19,0:17:4.22:0,4,39	0/0:30,0:24:60.20:0,60,948	0/0:11,1:12:27.09:0,27,452	1/1:26,1:24:7.11:84,7,0	1/1:17,0:13:4.25:18,4,0	0/1:25,0:20:2.59:3,0,24	1/1:27,0:22:5.85:48,6,0	1/1:26,0:23:18.65:139,19,0	0/1:25,0:17:28.37:28,0,97	0/0:28,0:27:54.16:0,54,869	0/1:22,0:15:13.03:13,0,258	0/0:15,0:13:0.47:0,0,1	./.	./.	0/0:10,1:8:2.80:0,3,13	1/1:23,1:17:2.98:21,3,0	0/1:24,0:21:0:0,0,0	0/1:30,0:25:99:199,0,331	0/1:25,0:20:34.01:85,0,34	0/1:6,0:4:17.10:17,0,72
chr10	38887943	.	CTCTG	C	525.49	PASS	AB=0.950;AC=18;AF=0.391;AN=46;BaseQRankSum=3.633;DP=614;FS=1.647;HRun=0;HaplotypeScore=116.5659;InbreedingCoeff=-0.0935;MQ=30.04;MQ0=47;MQRankSum=-3.114;QD=1.55;ReadPosRankSum=-0.470;VQSLOD=2.3921;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:33:72.21:0,72,1483	0/1:10,0:8:6.12:55,0,6	./.	./.	./.	0/0:26,0:24:2.69:0,3,9	0/1:21,0:14:3.70:14,0,4	0/1:19,0:11:14.88:15,0,255	0/1:17,3:18:12.16:12,0,18	0/0:30,0:24:72.23:0,72,1520	0/0:11,0:11:27.09:0,27,627	0/1:31,0:26:18.03:32,0,18	0/1:17,1:13:1.93:42,0,2	0/1:24,2:19:28.73:52,0,29	0/0:23,4:22:5.19:0,5,27	0/1:24,2:23:54.12:66,0,54	0/1:23,3:17:99:199,0,136	0/0:29,0:28:53.88:0,54,1194	0/1:26,2:19:51.45:51,0,395	1/1:17,1:14:2.71:30,3,0	./.	./.	1/1:19,0:16:2.77:38,3,0	1/1:25,0:18:1.55:4,2,0	0/1:27,0:24:0:0,0,0	0/0:32,0:27:72.05:0,72,795	0/1:22,3:20:49.47:49,0,159	0/0:7,0:4:7.91:0,8,53
chr10	38887945	.	CTG	C	264.59	PASS	AB=0.994;AC=22;AF=0.478;AN=46;BaseQRankSum=8.304;DP=627;FS=0.618;HRun=0;HaplotypeScore=113.6260;InbreedingCoeff=0.2502;MQ=30.30;MQ0=48;MQRankSum=-7.018;QD=0.82;ReadPosRankSum=-0.239;VQSLOD=1.9684;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:34:72.15:0,72,1242	1/1:10,0:8:8.07:41,8,0	./.	./.	./.	0/0:25,2:24:2.50:0,2,6	1/1:21,1:15:5.53:38,6,0	0/1:21,0:13:23.35:23,0,234	0/1:20,0:18:11.39:12,0,11	0/0:35,0:30:76.78:0,77,1285	0/0:12,0:12:27.09:0,27,509	1/1:31,1:27:7.96:44,8,0	1/1:19,0:14:5.93:36,6,0	0/1:26,0:19:13.34:13,0,51	1/1:27,0:22:4.68:17,5,0	1/1:26,0:23:9.59:66,10,0	0/1:27,0:18:71.54:72,0,96	0/0:29,0:28:44.15:0,44,883	0/0:29,0:19:6.67:0,7,349	1/1:18,0:14:2.54:14,3,0	./.	./.	0/0:19,0:16:0.89:0,1,2	1/1:23,1:17:1.55:4,2,0	0/1:25,1:24:0:0,0,0	0/0:32,0:27:1.70:0,2,453	0/1:25,0:20:27.54:28,0,33	0/0:7,0:4:0.08:0,0,68
chr10	38887947	.	GTCTC	G	179.32	PASS	AB=0.893;AC=12;AF=0.261;AN=46;BaseQRankSum=4.032;DP=632;FS=13.126;HRun=0;HaplotypeScore=121.6626;InbreedingCoeff=0.0593;MQ=30.08;MQ0=48;MQRankSum=-2.917;QD=0.82;ReadPosRankSum=-0.098;VQSLOD=1.8314;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:33:69.21:0,69,1418	0/1:7,2:7:7.43:35,0,7	./.	./.	./.	0/0:25,0:24:2.69:0,3,9	0/0:25,0:16:0.21:0,0,10	0/0:22,0:14:33.24:0,33,428	0/1:17,3:18:1.40:12,0,1	0/0:35,0:30:86.50:0,87,1936	0/0:13,0:13:27.07:0,27,689	0/0:32,0:27:1.35:0,1,18	0/1:18,2:14:16.47:23,0,16	0/1:21,6:19:38.31:38,0,55	0/0:24,3:22:5.85:0,6,46	0/1:21,5:23:35.76:36,0,75	0/1:25,2:18:99:118,0,167	0/0:27,0:26:51.12:0,51,1224	0/0:27,0:17:6.01:0,6,560	1/1:18,0:14:2.50:13,3,0	./.	./.	1/1:21,0:18:2.72:19,3,0	0/0:23,0:17:0:0,0,0	0/1:25,0:24:0.01:0,0,0	0/0:32,0:27:72.52:0,73,906	0/1:25,0:20:8.94:9,0,256	0/0:7,0:4:8.34:0,8,43
chr10	38887953	.	GTC	G	88.54	PASS	AB=0.907;AC=13;AF=0.295;AN=44;BaseQRankSum=4.636;DP=639;FS=19.387;HRun=0;HaplotypeScore=114.8652;InbreedingCoeff=0.1820;MQ=29.58;MQ0=49;MQRankSum=-4.513;QD=0.41;ReadPosRankSum=-1.366;VQSLOD=1.0122;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:33:42.13:0,42,653	1/1:7,2:7:5.16:19,5,0	./.	./.	./.	0/0:21,7:25:1.93:0,2,5	0/0:23,2:15:0.67:0,1,6	0/0:20,1:15:26.82:0,27,210	1/1:19,3:18:3.47:27,3,0	0/0:33,0:28:81.11:0,81,1283	0/0:14,0:13:24.08:0,24,390	0/0:29,2:26:1.34:0,1,40	1/1:18,2:13:4.83:22,5,0	0/1:23,6:21:2.84:3,0,75	0/0:23,3:21:3.22:0,3,13	0/0:21,5:23:3.25:0,3,26	0/1:26,2:19:9.61:10,0,118	0/0:26,0:24:45.11:0,45,688	0/1:26,4:18:64.13:64,0,175	1/1:19,2:15:2.71:33,3,0	./.	./.	0/0:20,2:19:3.01:0,3,36	0/0:22,2:17:0:0,0,0	./.	0/1:32,0:27:3.16:3,0,146	0/1:22,3:20:31.04:31,0,82	0/0:7,0:4:4.23:0,4,25
chr10	38887967	.	CTG	C	142.09	PASS	AB=0.988;AC=15;AF=0.326;AN=46;BaseQRankSum=4.659;DP=672;FS=10.250;HRun=0;HaplotypeScore=116.0033;InbreedingCoeff=0.1340;MQ=29.25;MQ0=58;MQRankSum=-4.731;QD=0.48;ReadPosRankSum=1.045;VQSLOD=1.2320;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:30:10.65:0,11,752	0/1:9,0:7:1.95:4,0,2	./.	./.	./.	0/1:30,1:27:1.75:3,0,2	1/1:30,0:20:4.15:15,4,0	0/0:25,1:16:5.31:0,5,167	0/1:23,1:19:15.10:35,0,15	0/0:36,0:33:47.61:0,48,1323	0/0:15,0:14:24.06:0,24,397	0/1:30,0:25:23.17:23,0,39	0/0:18,0:12:3.32:0,3,26	0/0:27,1:21:7.55:0,8,76	1/1:25,0:20:0.94:7,1,0	0/0:29,0:26:12.61:0,13,76	0/0:27,0:18:24.14:0,24,174	0/0:28,0:26:42.07:0,42,697	0/1:39,0:25:19.31:19,0,189	1/1:27,0:19:2.96:20,3,0	./.	./.	0/0:26,0:23:3.01:0,3,50	0/0:26,0:19:0:0,0,0	0/1:25,0:23:0:0,0,0	0/1:27,1:23:94.09:94,0,113	0/1:26,0:21:13.88:41,0,14	0/1:5,0:2:0.14:4,0,0
chr10	38887969	.	G	GTC	385.89	PASS	AB=0.995;AC=21;AF=0.477;AN=44;BaseQRankSum=5.638;DP=667;FS=7.283;HRun=0;HaplotypeScore=115.0843;InbreedingCoeff=0.2524;MQ=29.04;MQ0=59;MQRankSum=-5.668;QD=1.11;ReadPosRankSum=0.358;VQSLOD=1.7809;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:30:22.76:0,23,510	1/1:7,2:7:2.17:50,2,0	./.	./.	./.	1/1:25,3:28:0.98:3,1,0	1/1:26,2:20:2.59:10,3,0	0/1:24,0:16:1.51:2,0,109	1/1:20,3:19:6.79:45,7,0	0/0:35,0:32:73.74:0,74,868	0/0:14,0:13:19.61:0,20,233	1/1:30,0:25:6.36:64,6,0	0/0:16,2:12:3.84:0,4,21	0/0:27,2:22:4.63:0,5,45	1/1:20,5:20:3.48:33,3,0	1/1:22,4:25:9.50:117,9,0	0/1:24,1:16:57.91:142,0,58	0/0:28,0:26:36.11:0,36,449	0/1:36,0:22:10.47:10,0,296	0/0:26,0:18:2.92:0,3,17	./.	./.	0/0:27,0:23:2.90:0,3,32	./.	0/1:20,0:23:0:0,0,0	0/1:26,0:23:37.92:38,0,95	0/1:26,0:21:5.48:5,0,75	0/1:4,0:2:1.25:2,0,1
chr10	38887979	.	CTG	C	53.60	PASS	AB=0.932;AC=8;AF=0.190;AN=42;BaseQRankSum=2.343;DP=654;FS=6.919;HRun=0;HaplotypeScore=104.6145;InbreedingCoeff=-0.0470;MQ=28.72;MQ0=55;MQRankSum=0.012;QD=0.31;ReadPosRankSum=-2.076;VQSLOD=1.2740;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:32:0.39:0,0,656	0/1:7,0:6:2.21:2,0,10	./.	./.	./.	0/1:26,3:25:2.34:6,0,2	0/1:29,1:19:12.36:39,0,12	0/0:25,1:15:21.20:0,21,415	0/1:22,3:20:2.51:3,0,53	0/0:32,0:29:54.72:0,55,1238	0/0:18,0:16:1.08:0,1,310	0/1:10,6:23:32.68:37,0,33	0/0:16,0:10:6.01:0,6,63	0/0:29,1:22:0.37:0,0,69	1/1:20,2:17:1.35:40,1,0	0/0:23,1:22:4.53:0,5,27	0/0:23,1:15:4.74:0,5,167	0/0:28,0:26:42.03:0,42,612	0/0:32,0:21:56.91:0,57,778	0/0:26,0:18:2.88:0,3,15	./.	./.	0/0:19,1:24:2.96:0,3,19	./.	./.	0/1:31,0:26:30.64:31,0,520	0/0:25,0:21:28.70:0,29,293	0/0:5,0:2:2.22:0,2,8
chr10	38887993	.	GTC	G	290.26	PASS	AB=0.981;AC=8;AF=0.190;AN=42;BaseQRankSum=-4.765;DP=635;FS=9.498;HRun=0;HaplotypeScore=106.9021;InbreedingCoeff=0.1224;MQ=29.01;MQ0=59;MQRankSum=4.512;QD=1.79;ReadPosRankSum=1.644;VQSLOD=1.5774;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:34,0:33:28.86:251,29,0	0/0:6,0:5:2.60:0,3,10	./.	./.	./.	0/0:28,0:24:1.73:0,2,5	0/0:27,0:16:3:0,3,28	./.	0/0:23,0:19:2.74:0,3,12	0/1:29,0:26:24.07:27,0,24	0/0:19,0:16:0.47:0,0,1	0/0:27,0:22:7.98:0,8,33	0/1:19,0:13:9.32:9,0,20	0/0:28,0:20:0.31:0,0,13	0/0:20,0:15:1.65:0,2,5	0/0:18,0:17:0:0,0,0	0/0:22,0:14:6.68:0,7,30	1/1:17,9:24:6.02:66,6,0	0/1:27,1:20:17.45:23,0,17	0/0:26,1:19:0:0,0,0	./.	0/0:30,0:26:2.74:0,3,12	0/0:29,0:24:0:0,0,0	0/0:30,0:24:1.36:0,1,4	./.	0/0:31,0:25:5.20:0,5,29	0/1:22,1:19:16.52:23,0,17	./.
chr10	38888008	.	T	TGC	168.17	PASS	AB=0.972;AC=10;AF=0.200;AN=50;BaseQRankSum=2.067;DP=591;FS=17.621;HRun=0;HaplotypeScore=90.9005;InbreedingCoeff=0.0460;MQ=31.93;MQ0=51;MQRankSum=-1.809;QD=0.96;ReadPosRankSum=-2.825;VQSLOD=0.0435;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:34:59.93:0,60,701	0/1:6,0:5:0.88:1,0,10	0/0:5,0:1:2.97:0,3,20	0/0:6,0:3:6.02:0,6,73	./.	0/0:26,0:22:1.31:0,1,4	0/0:25,0:17:3.89:0,4,33	0/0:15,0:6:18.06:0,18,236	0/1:22,0:17:3.91:4,0,90	0/1:22,6:26:99:179,0,725	0/0:18,0:15:18.06:0,18,271	0/1:18,0:14:14.13:18,0,14	0/0:20,0:14:15.52:0,16,192	0/1:26,0:20:33.41:33,0,120	0/1:24,0:18:0.09:1,0,0	0/0:18,0:17:3.51:0,4,10	0/1:20,1:14:34.56:35,0,97	0/0:23,0:21:23.72:0,24,301	0/0:18,0:14:39.09:0,39,483	0/0:25,0:18:1.30:0,1,5	./.	0/0:31,0:26:1.55:0,2,4	0/1:26,0:21:0:0,0,0	0/0:30,0:22:2.41:0,2,62	./.	0/0:29,1:25:14.31:0,14,636	0/0:19,0:16:24.07:0,24,290	1/1:5,0:2:0.47:1,0,0
chr10	38889269	.	TAGC	T	8169.93	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=14.875;DP=693;FS=7.389;HRun=0;HaplotypeScore=99.3678;InbreedingCoeff=0.9801;MQ=63.11;MQ0=0;MQRankSum=-2.560;QD=40.65;ReadPosRankSum=-0.217;VQSLOD=5.8870;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,111,2370	0/0:13,0:13:36.12:0,36,783	0/0:21,0:20:45.11:0,45,893	0/0:18,0:18:47.68:0,48,826	0/0:17,0:17:48.15:0,48,983	0/0:34,0:34:96.30:0,96,2014	0/0:21,0:21:57.20:0,57,1252	1/1:6,40:46:99:1894,120,0	0/0:21,0:21:60.21:0,60,1308	0/0:32,0:32:90.31:0,90,1973	0/0:16,0:16:45.15:0,45,984	0/0:22,0:22:60.19:0,60,1261	0/0:27,0:27:78.27:0,78,1736	0/0:21,0:21:60.21:0,60,1309	0/0:27,0:27:81.28:0,81,1795	0/0:31,0:31:90.30:0,90,1943	0/0:27,0:27:78.24:0,78,1626	0/0:25,0:25:69.19:0,69,1459	1/1:1,16:17:42.13:640,42,0	1/1:1,24:25:75.19:1142,75,0	1/1:0,19:19:54.18:871,54,0	0/0:33,0:33:99:0,99,2119	0/0:31,0:31:90.27:0,90,1890	0/0:17,0:17:51.18:0,51,1134	1/1:1,22:23:60.14:948,60,0	1/1:5,23:28:5.42:1022,5,0	1/1:3,30:33:75.26:1213,75,0	1/1:0,10:10:27.09:441,27,0
chr10	38890559	.	T	TTGTGTGTG	4352.71	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=-3.686;DP=620;FS=0.568;HRun=0;HaplotypeScore=211.2978;InbreedingCoeff=0.8196;MQ=62.90;MQ0=3;MQRankSum=-8.273;QD=35.39;ReadPosRankSum=-5.420;VQSLOD=3.4688;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,117,2886	0/0:8,0:8:12.04:0,12,218	0/0:27,0:22:3.12:0,3,345	0/0:20,0:10:7.69:0,8,132	0/0:26,0:26:48.06:0,48,853	1/1:9,1:27:33.11:1081,33,0	1/1:11,1:22:27.09:904,27,0	0/0:28,0:28:24.12:0,24,640	0/0:19,0:19:36.12:0,36,669	0/0:30,0:30:69.21:0,69,1723	0/0:12,0:13:24.08:0,24,597	1/1:5,8:18:26.81:879,27,0	0/0:11,0:11:23.87:0,24,404	0/0:22,0:22:38.92:0,39,686	0/0:21,0:20:35.91:0,36,627	0/0:20,0:20:45.15:0,45,829	0/0:29,0:29:7.49:0,7,1008	0/0:33,0:33:71.04:0,71,1686	0/1:17,0:17:3.84:4,0,314	0/0:23,0:23:48.16:0,48,895	0/0:36,0:36:39.13:0,39,707	0/0:10,0:10:12.04:0,12,223	1/1:8,8:18:23.99:872,24,0	1/1:10,8:21:18.06:613,18,0	0/0:19,0:18:38.87:0,39,653	0/0:26,0:26:7.11:0,7,759	0/0:16,0:16:21.06:0,21,361	0/0:15,0:15:24.08:0,24,447
chr10	38890572	.	TGTGTGC	T	2360.76	PASS	AB=0.992;AC=33;AF=0.589;AN=56;BaseQRankSum=10.574;DP=620;FS=7.942;HRun=0;HaplotypeScore=180.7499;InbreedingCoeff=0.2786;MQ=58.20;MQ0=3;MQRankSum=-1.465;QD=5.58;ReadPosRankSum=3.483;VQSLOD=1.7476;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,130,4251	1/1:9,0:9:10.47:42,10,0	0/0:25,0:19:12.64:0,13,512	0/1:25,0:11:13.14:13,0,135	1/1:22,1:23:30.47:215,30,0	0/0:27,0:27:8.15:0,8,518	0/0:27,0:27:20.72:0,21,292	1/1:23,0:23:46.47:221,46,0	0/1:21,0:21:33.78:83,0,34	0/0:28,0:28:81.21:0,81,2572	0/0:15,0:15:39.06:0,39,1058	0/1:19,0:19:14.70:15,0,424	1/1:11,2:13:24.76:165,25,0	1/1:22,1:23:2.24:155,2,0	1/1:19,0:18:31.32:125,31,0	1/1:20,0:20:38.82:156,39,0	1/1:28,3:31:8.43:279,8,0	0/0:29,0:29:78.24:0,78,2644	0/1:12,0:12:7.51:117,0,8	0/1:23,0:23:5.31:115,0,5	1/1:38,1:39:36.91:217,37,0	0/1:12,0:12:25.41:25,0,33	0/1:20,0:20:24.13:24,0,337	0/1:22,0:22:57.99:58,0,81	1/1:18,0:17:11.89:111,12,0	0/1:24,2:26:95.06:228,0,95	1/1:13,0:13:18.26:74,18,0	1/1:11,0:11:0.64:114,1,0
chr10	38890574	.	TGTGC	T	12062.05	PASS	AB=0.924;AC=38;AF=0.679;AN=56;BaseQRankSum=6.755;DP=610;FS=4.466;HRun=0;HaplotypeScore=132.3295;InbreedingCoeff=0.4797;MQ=57.66;MQ0=2;MQRankSum=-0.942;QD=27.11;ReadPosRankSum=1.764;VQSLOD=4.7632;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,136,3347	1/1:1,8:9:12.04:238,12,0	0/0:22,0:18:22.56:0,23,429	0/1:26,0:11:8.49:8,0,139	1/1:1,22:23:51.11:946,51,0	0/0:20,0:20:2.15:0,2,260	0/1:23,0:23:52.13:52,0,107	1/1:0,23:23:69.16:1153,69,0	1/1:2,18:20:36.12:713,36,0	0/0:29,0:29:84.14:0,84,1990	0/0:16,0:16:41.97:0,42,826	0/1:17,0:17:36.12:36,0,206	1/1:2,11:13:27.02:471,27,0	1/1:2,21:23:32.26:684,32,0	1/1:0,19:18:36.12:714,36,0	1/1:0,21:21:44.66:894,45,0	1/1:4,27:31:38.98:1065,39,0	0/0:29,0:29:81.21:0,81,2048	1/1:0,11:11:30.06:479,30,0	1/1:1,24:25:44.26:907,44,0	1/1:4,36:40:25.37:734,25,0	1/1:1,12:13:15.04:265,15,0	0/1:20,0:20:23.63:24,0,190	0/1:22,0:22:15.59:61,0,16	1/1:1,17:17:39.13:774,39,0	0/1:4,21:25:17.35:974,0,17	1/1:0,13:13:21.07:417,21,0	1/1:1,9:10:24.08:453,24,0
chr10	38890761	.	T	TTTTA	18472.51	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-7.016;DP=489;FS=6.312;HRun=0;HaplotypeScore=83.4832;InbreedingCoeff=0.9512;MQ=62.84;MQ0=0;MQRankSum=-6.451;QD=49.39;ReadPosRankSum=3.377;VQSLOD=5.5110;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:78.23:0,78,1345	1/1:2,6:8:18.06:455,18,0	0/0:14,0:13:35.69:0,36,551	0/0:14,0:13:26.70:0,27,463	1/1:4,12:16:39.13:907,39,0	1/1:4,7:12:18.06:456,18,0	1/1:7,11:18:30.10:758,30,0	1/1:16,7:26:39.09:867,39,0	1/1:3,8:11:30.10:723,30,0	0/0:21,0:21:57.19:0,57,964	0/0:15,0:15:39.13:0,39,678	1/1:5,13:18:36.12:872,36,0	1/1:2,8:10:24.08:606,24,0	1/1:7,11:19:33.11:833,33,0	1/1:3,20:23:54.19:1366,54,0	1/1:8,19:28:63.21:1592,63,0	1/1:2,14:18:45.07:1080,45,0	0/0:19,0:19:51.14:0,51,849	1/1:14,13:28:45.14:1090,45,0	1/1:8,9:16:27.09:662,27,0	1/1:5,16:21:45.15:1139,45,0	1/1:2,5:7:12.04:284,12,0	1/1:4,10:13:20.91:512,21,0	1/1:1,2:3:3.01:76,3,0	1/1:6,17:24:53.98:1310,54,0	1/1:3,20:25:67.47:1577,67,0	1/1:6,6:11:15.05:342,15,0	1/1:4,12:16:39.13:966,39,0
chr10	38891509	.	C	CAG	20038.39	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-17.223;DP=702;FS=2.480;HRun=0;HaplotypeScore=72.4511;InbreedingCoeff=0.9998;MQ=68.32;MQ0=2;MQRankSum=-2.654;QD=47.94;ReadPosRankSum=2.839;VQSLOD=5.7395;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,147,2124	1/1:0,11:11:33.11:618,33,0	0/0:19,0:17:44.50:0,44,594	0/0:18,0:18:51.17:0,51,728	1/1:4,18:22:57.20:1057,57,0	0/0:17,0:17:51.17:0,51,751	0/0:30,0:30:87.28:0,87,1261	1/1:8,21:30:69.21:1216,69,0	1/1:1,20:22:57.20:1066,57,0	0/0:23,0:23:66.22:0,66,955	0/0:18,0:18:54.18:0,54,795	0/0:32,0:32:96.29:0,96,1374	1/1:3,28:31:78.24:1461,78,0	1/1:2,23:26:69.24:1281,69,0	1/1:2,33:35:87.30:1630,87,0	1/1:2,35:38:96.33:1782,96,0	1/1:2,15:17:45.15:842,45,0	0/0:25,0:25:72.24:0,72,1060	1/1:3,23:26:75.26:1392,75,0	1/1:1,21:22:57.15:1032,57,0	1/1:2,38:39:99:1854,99,0	1/1:1,24:25:66.23:1236,66,0	0/0:22,0:22:60.19:0,60,863	0/0:26,0:26:75.25:0,75,1105	1/1:1,13:14:39.13:730,39,0	1/1:5,25:30:37.08:1382,37,0	1/1:0,20:20:51.17:953,51,0	1/1:0,9:9:27.09:506,27,0
chr10	38891763	.	TAA	T	12078.01	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=6.872;DP=571;FS=4.819;HRun=10;HaplotypeScore=80.5575;InbreedingCoeff=0.9874;MQ=74.45;MQ0=0;MQRankSum=-2.967;QD=27.39;ReadPosRankSum=3.043;VQSLOD=5.1716;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:30:86.75:0,87,1277	1/1:0,7:7:18.05:200,18,0	0/0:13,0:13:11.21:0,11,280	0/0:13,0:15:23.56:0,24,296	1/1:6,24:30:69.17:769,69,0	1/1:5,23:28:60.14:669,60,0	1/1:0,10:10:18.01:187,18,0	1/1:1,27:28:81.19:890,81,0	1/1:0,13:13:36.10:401,36,0	0/0:24,0:24:69.23:0,69,1085	0/0:19,0:19:42.14:0,42,665	1/1:3,20:23:48.11:535,48,0	1/1:0,24:24:72.19:803,72,0	1/1:2,12:14:33.08:368,33,0	1/1:2,21:23:48.12:535,48,0	1/1:3,23:26:63.16:702,63,0	1/1:2,26:28:25:722,25,0	0/0:28,0:28:78.25:0,78,1210	1/1:2,27:29:81.22:901,81,0	1/1:2,15:17:45.12:499,45,0	1/1:0,18:18:48.13:535,48,0	1/1:2,15:17:44.99:483,45,0	1/1:2,18:20:45.11:502,45,0	1/1:0,22:22:57.15:635,57,0	1/1:0,14:14:30.08:334,30,0	1/1:1,20:21:57.12:625,57,0	1/1:1,13:14:32.97:368,33,0	1/1:1,14:15:21.30:414,21,0
chr10	38892056	.	G	GA	2302.53	PASS	AB=0.981;AC=45;AF=0.804;AN=56;BaseQRankSum=5.570;DP=487;FS=16.562;HRun=14;HaplotypeScore=91.0430;InbreedingCoeff=0.4692;MQ=43.98;MQ0=25;MQRankSum=-5.190;QD=6.03;ReadPosRankSum=-1.285;VQSLOD=0.5995;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:34.84:0,35,208	1/1:7,0:7:8.63:47,9,0	0/0:23,0:2:5.85:0,6,34	0/1:14,0:3:0.98:23,0,1	1/1:21,1:20:13.12:74,13,0	1/1:16,0:16:7.59:153,8,0	0/1:16,1:15:63:105,0,63	1/1:23,0:25:48.99:284,49,0	1/1:13,0:12:17.14:94,17,0	0/0:25,0:24:31.15:0,31,205	0/1:12,0:12:15.18:15,0,65	1/1:11,0:9:6.36:37,6,0	1/1:12,1:13:22.86:134,23,0	1/1:9,0:8:2.99:25,3,0	1/1:19,1:17:27.46:158,27,0	1/1:22,1:22:29.14:184,29,0	1/1:26,0:23:27.12:189,27,0	0/0:23,0:20:2.46:0,2,103	1/1:15,0:13:24.79:136,25,0	1/1:15,0:13:6.39:40,6,0	1/1:18,0:17:5.92:43,6,0	1/1:13,1:14:18.22:120,18,0	1/1:13,1:12:3:25,3,0	1/1:13,2:14:8.44:52,8,0	1/1:11,0:12:12.50:68,13,0	1/1:17,1:17:13.24:150,13,0	1/1:18,0:14:13.64:181,14,0	1/1:12,0:7:20.32:124,20,0
chr10	38892064	.	A	AAAG	2129.31	PASS	AB=0.978;AC=24;AF=0.429;AN=56;BaseQRankSum=5.503;DP=519;FS=2.764;HRun=0;HaplotypeScore=105.4646;InbreedingCoeff=0.0782;MQ=52.90;MQ0=25;MQRankSum=-6.334;QD=6.76;ReadPosRankSum=0.516;VQSLOD=2.6280;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:30:63.20:0,63,765	0/1:7,0:7:23.12:35,0,23	0/0:33,0:7:4.93:0,5,60	0/1:23,0:8:21.34:21,0,56	0/1:22,0:20:16.74:71,0,17	0/0:18,0:18:43.04:0,43,296	0/0:18,0:17:47.51:0,48,452	1/1:31,0:31:9.48:357,9,0	0/1:11,0:10:28.92:36,0,29	0/0:26,0:25:69:0,69,817	0/0:14,0:13:35.94:0,36,386	0/0:10,0:8:10.39:0,10,55	0/1:11,0:11:27.24:98,0,27	0/1:9,0:8:7.40:11,0,7	0/1:19,0:16:15.45:72,0,15	0/1:17,0:16:13.63:170,0,14	0/1:27,0:24:28.50:175,0,29	0/0:22,0:19:41.99:0,42,469	1/1:23,0:21:12.68:190,13,0	1/1:11,0:9:7.74:71,8,0	1/1:14,0:14:6.15:141,6,0	1/1:14,0:14:18.54:120,19,0	0/0:14,0:12:9.33:0,9,57	0/0:16,0:15:11.89:0,12,91	1/1:16,0:15:11.85:136,12,0	0/1:23,0:22:15.40:262,0,15	0/1:19,0:15:12.75:226,0,13	0/1:13,4:12:28.77:119,0,29
chr10	38892066	.	A	AG	3497.86	PASS	AB=0.720;AC=22;AF=0.393;AN=56;BaseQRankSum=0.293;DP=518;FS=26.292;HRun=0;HaplotypeScore=84.3549;InbreedingCoeff=0.1134;MQ=53.96;MQ0=25;MQRankSum=-7.763;QD=11.94;ReadPosRankSum=0.814;VQSLOD=1.6418;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:29:63.76:0,64,686	0/1:4,3:7:25.89:26,0,34	0/0:33,0:7:15.53:0,16,134	0/0:24,0:9:6.38:0,6,41	0/1:13,9:20:3.54:135,0,4	0/0:16,0:16:30.97:0,31,240	0/0:20,0:19:33.47:0,33,374	0/1:19,14:33:9.25:556,0,9	0/1:4,7:10:10.38:176,0,10	0/0:26,0:25:72.09:0,72,805	0/0:15,0:14:35.64:0,36,336	0/0:9,0:7:10.97:0,11,60	0/1:10,2:11:13.72:93,0,14	0/1:5,4:8:2.22:14,0,2	1/1:11,8:16:8.66:236,9,0	0/1:8,8:15:9.91:258,0,10	0/1:12,14:23:20.75:343,0,21	0/0:22,0:19:41.94:0,42,424	0/1:18,8:24:21.58:360,0,22	0/1:8,2:8:13.81:57,0,14	1/1:8,6:14:8.96:138,9,0	1/1:10,4:14:6.21:182,6,0	0/0:12,0:10:6.77:0,7,41	0/0:16,0:15:9.78:0,10,67	1/1:9,6:14:7.11:144,7,0	1/1:16,7:22:18.74:348,19,0	0/1:10,9:15:12.29:267,0,12	0/1:12,4:12:23.54:164,0,24
chr10	38892071	.	G	GAA	3737.75	PASS	AB=1.000;AC=35;AF=0.625;AN=56;BaseQRankSum=5.449;DP=535;FS=2.292;HRun=14;HaplotypeScore=99.2570;InbreedingCoeff=0.8555;MQ=60.06;MQ0=25;MQRankSum=-8.205;QD=12.06;ReadPosRankSum=-0.473;VQSLOD=2.7514;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:30:57.94:0,58,514	1/1:4,1:7:9.85:82,10,0	0/0:36,0:11:14.96:0,15,131	0/0:23,0:10:11.18:0,11,83	1/1:5,0:18:19.18:155,19,0	0/0:15,0:15:19.01:0,19,80	0/0:17,0:21:23.84:0,24,128	1/1:16,19:36:52.63:561,53,0	1/1:9,0:10:8.83:76,9,0	0/0:28,0:27:56.64:0,57,542	0/0:15,0:15:28.68:0,29,234	0/1:11,0:9:5.12:6,0,5	1/1:9,0:10:22.26:202,22,0	1/1:8,0:8:10.96:60,11,0	1/1:12,0:17:14.68:149,15,0	1/1:12,1:17:24.46:226,24,0	1/1:23,1:24:22.25:193,22,0	0/0:22,0:19:28.71:0,29,287	1/1:11,15:25:46.19:500,46,0	1/1:5,5:9:13.18:114,13,0	1/1:7,6:14:11.98:125,12,0	1/1:5,0:12:12.01:113,12,0	0/0:11,0:9:2.14:0,2,7	0/0:17,0:16:4.79:0,5,19	1/1:10,4:15:23.53:253,24,0	1/1:9,14:22:39.03:467,39,0	1/1:14,5:17:28.92:300,29,0	1/1:13,2:12:17.21:155,17,0
chr10	38892559	.	T	TC	18356.08	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-1.838;DP=552;FS=2.162;HRun=0;HaplotypeScore=68.0714;InbreedingCoeff=0.9844;MQ=85.85;MQ0=0;MQRankSum=-3.799;QD=43.50;ReadPosRankSum=2.746;VQSLOD=5.5663;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:90.30:0,90,1253	1/1:0,9:9:27.09:431,27,0	0/0:16,0:16:48.13:0,48,626	0/0:20,0:20:48.18:0,48,637	1/1:0,9:9:24.08:367,24,0	1/1:0,15:15:45.15:717,45,0	1/1:0,27:27:78.27:1244,78,0	1/1:1,15:16:45.11:649,45,0	1/1:1,29:30:84.29:1339,84,0	0/0:23,0:23:66.20:0,66,902	0/0:7,0:7:21.06:0,21,274	1/1:0,23:23:66.23:1052,66,0	1/1:0,20:20:57.02:905,57,0	1/1:0,25:25:66.23:1051,66,0	1/1:0,23:23:60.20:958,60,0	1/1:0,18:18:48.16:765,48,0	1/1:0,45:45:99:2011,126,0	0/0:33,0:33:99:0,99,1366	1/1:2,15:17:42.14:662,42,0	1/1:0,6:6:17.80:251,18,0	1/1:0,40:40:99:1770,111,0	1/1:0,14:14:35.90:543,36,0	1/1:0,5:5:12.04:192,12,0	1/1:1,27:28:72.23:1149,72,0	1/1:0,18:18:51.17:813,51,0	1/1:0,15:15:42.14:670,42,0	1/1:0,15:15:41.17:627,41,0	1/1:0,4:4:12.04:191,12,0
chr10	38893725	.	TACACACACACAC	T	9705.15	PASS	AB=0.780;AC=29;AF=0.604;AN=48;BaseQRankSum=6.854;DP=593;FS=0.544;HRun=0;HaplotypeScore=202.2641;InbreedingCoeff=0.8580;MQ=49.42;MQ0=9;MQRankSum=-7.006;QD=34.42;ReadPosRankSum=4.159;VQSLOD=4.2019;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:32:57.18:0,57,2795	./.	./.	./.	1/1:6,15:21:15.48:406,15,0	0/0:15,0:20:20.99:0,21,581	0/0:30,0:38:36.12:0,36,1769	0/1:23,9:32:99:426,0,110	1/1:2,10:13:27.09:946,27,0	0/0:22,0:22:42.14:0,42,2049	0/0:14,0:14:30.10:0,30,1516	0/0:30,0:34:24.07:0,24,694	1/1:9,8:17:9.03:315,9,0	1/1:7,12:19:24.08:841,24,0	1/1:7,17:25:45.15:1478,45,0	1/1:3,6:12:27.09:801,27,0	1/1:11,5:16:9.03:315,9,0	0/0:6,0:11:24.55:0,25,829	1/1:8,6:14:18.06:631,18,0	1/1:16,11:28:18.06:631,18,0	./.	1/1:4,16:20:12.04:421,12,0	0/0:13,0:13:9.03:0,9,297	0/0:31,0:34:11.72:0,12,411	1/1:5,13:17:15.05:518,15,0	1/1:11,8:18:27.09:903,27,0	1/1:11,9:20:20.82:735,21,0	1/1:3,4:8:12.04:337,12,0
chr10	38894391	.	C	CT	1691.61	PASS	AC=10;AF=0.185;AN=54;BaseQRankSum=-7.288;DP=348;FS=0.000;HRun=2;HaplotypeScore=36.7816;InbreedingCoeff=0.8494;MQ=54.47;MQ0=8;MQRankSum=0.582;QD=28.19;ReadPosRankSum=2.277;VQSLOD=3.2226;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:30:66.10:0,66,780	0/0:8,0:8:18.06:0,18,223	0/0:5,0:2:5.85:0,6,51	0/0:8,0:8:13.59:0,14,181	0/0:13,0:13:36.11:0,36,446	1/1:7,19:22:51.64:735,52,0	1/1:1,13:13:36.12:518,36,0	0/0:32,0:29:75.16:0,75,883	0/0:2,0:2:3.01:0,3,37	0/0:4,0:4:12.04:0,12,149	0/0:9,0:9:24.08:0,24,297	1/1:2,8:10:21.07:301,21,0	0/0:8,0:8:24.07:0,24,286	0/0:2,0:1:3.01:0,3,37	0/0:8,0:7:18.06:0,18,222	0/0:11,0:11:30.08:0,30,359	0/0:27,0:27:57.18:0,57,704	0/0:27,0:25:71.89:0,72,818	0/0:22,0:21:57.17:0,57,694	0/0:12,0:12:36.08:0,36,429	0/0:10,0:10:18.06:0,18,223	./.	1/1:1,4:5:6.02:86,6,0	1/1:0,5:5:15.05:216,15,0	0/0:7,0:7:20.99:0,21,226	0/0:12,0:12:33.08:0,33,393	0/0:9,0:9:15.54:0,16,286	0/0:20,0:19:39.12:0,39,483
chr10	38898069	.	T	TTAAAA	4053.19	PASS	AB=0.529;AC=37;AF=0.740;AN=50;BaseQRankSum=-2.486;DP=213;FS=29.596;HRun=0;HaplotypeScore=39.4057;InbreedingCoeff=0.5057;MQ=65.66;MQ0=13;MQRankSum=0.170;QD=34.94;ReadPosRankSum=-2.583;VQSLOD=1.0940;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:6:9.03:0,9,168	1/1:3,0:3:6.02:121,6,0	0/0:21,0:9:10.95:0,11,172	0/0:37,0:17:1.40:0,1,98	1/1:3,1:2:3.01:87,3,0	0/1:1,7:9:22.88:247,0,23	0/0:2,0:2:6.02:0,6,70	1/1:22,0:16:33.11:796,33,0	1/1:0,2:3:3.01:86,3,0	0/0:5,0:4:9.03:0,9,170	./.	1/1:2,0:2:3.01:33,3,0	1/1:2,2:4:8.96:190,9,0	1/1:1,0:1:3:27,3,0	1/1:2,3:5:15.01:352,15,0	1/1:3,1:2:6.02:127,6,0	1/1:11,1:12:24.02:329,24,0	0/0:24,0:22:51.12:0,51,834	1/1:5,9:16:36.06:616,36,0	1/1:0,1:1:3.01:87,3,0	1/1:3,1:2:3.01:86,3,0	./.	./.	1/1:0,2:2:3.01:87,3,0	1/1:5,0:5:8.95:71,9,0	1/1:2,2:4:8.99:193,9,0	1/1:3,2:4:6.02:173,6,0	1/1:0,8:7:12.04:346,12,0
chr10	38898089	.	A	AT	318.30	PASS	AB=0.869;AC=10;AF=0.185;AN=54;BaseQRankSum=6.163;DP=253;FS=0.977;HRun=0;HaplotypeScore=47.2940;InbreedingCoeff=0.0813;MQ=71.26;MQ0=10;MQRankSum=-3.062;QD=4.97;ReadPosRankSum=3.708;VQSLOD=2.7318;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:24.07:0,24,317	0/1:1,1:2:28.39:40,0,28	0/0:25,0:9:20.76:0,21,217	0/0:37,0:18:23.95:0,24,202	0/0:6,0:5:10.61:0,11,149	0/0:8,0:8:7.46:0,7,121	0/0:3,0:3:9.03:0,9,126	0/1:16,8:23:99:282,0,531	0/0:4,0:4:4.42:0,4,80	0/0:7,0:7:21.06:0,21,281	0/0:3,0:3:9.02:0,9,109	1/1:1,0:1:2.80:13,3,0	0/0:5,0:5:2.57:0,3,56	0/0:4,0:4:8.97:0,9,87	0/0:8,0:8:9.87:0,10,130	0/1:5,0:5:9.18:9,0,96	0/1:9,3:12:81.73:82,0,157	0/0:23,0:23:66.22:0,66,904	0/1:17,0:16:5.17:5,0,376	0/0:9,0:9:19.68:0,20,291	0/0:2,0:2:1.34:0,1,39	./.	0/1:1,0:1:0:0,0,0	1/1:2,0:2:1.25:3,1,0	0/0:5,0:5:15.04:0,15,195	0/0:9,0:9:22.45:0,22,289	0/0:4,0:4:2.91:0,3,61	0/0:17,0:15:9.02:0,9,165
chr10	38898141	.	TA	T	1374.78	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=4.417;DP=384;FS=0.000;HRun=11;HaplotypeScore=53.9496;InbreedingCoeff=0.9267;MQ=78.69;MQ0=4;MQRankSum=0.665;QD=17.40;ReadPosRankSum=4.553;VQSLOD=4.2889;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:21:62.99:0,63,652	1/1:0,4:4:11.99:99,12,0	0/0:34,0:18:16.05:0,16,147	0/0:25,0:16:19.43:0,19,134	1/1:1,13:14:35.95:295,36,0	0/0:16,0:16:39.08:0,39,407	0/0:8,0:8:18.05:0,18,192	0/0:29,0:29:44.55:0,45,666	1/1:1,8:9:23.97:197,24,0	0/0:10,0:11:23.89:0,24,238	0/0:17,0:17:48.06:0,48,490	0/0:2,0:6:11.36:0,11,65	1/1:1,7:8:17.97:148,18,0	1/1:0,6:6:14.98:123,15,0	1/1:2,13:16:34.98:277,35,0	1/1:2,4:6:11.98:99,12,0	1/1:1,13:14:35.96:296,36,0	0/0:16,2:18:24.87:0,25,428	0/0:21,0:21:44.94:0,45,455	0/0:16,0:16:39.08:0,39,403	0/0:3,0:4:8.84:0,9,71	1/1:0,2:2:5.99:49,6,0	0/0:0,0:5:5.67:0,6,29	0/0:2,0:5:13.56:0,14,74	0/0:15,0:15:42.09:0,42,439	0/0:17,0:17:36.05:0,36,362	0/0:6,0:6:14.98:0,15,139	0/0:30,0:28:63.16:0,63,671
chr10	38898709	.	A	AAAAC	17898.97	PASS	AB=0.758;AC=34;AF=0.607;AN=56;BaseQRankSum=-16.393;DP=645;FS=3.003;HRun=0;HaplotypeScore=100.6367;InbreedingCoeff=0.8750;MQ=70.59;MQ0=3;MQRankSum=-0.866;QD=42.72;ReadPosRankSum=2.745;VQSLOD=5.0540;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:91.78:0,92,1418	1/1:5,7:12:15.05:371,15,0	0/1:24,0:21:2.99:3,0,186	0/0:28,0:26:31.76:0,32,489	1/1:4,29:32:84.28:1855,84,0	0/0:22,0:22:57.19:0,57,950	0/0:18,0:18:42.13:0,42,674	1/1:17,12:31:42.10:881,42,0	1/1:4,14:18:35.98:890,36,0	0/0:32,0:32:84.29:0,84,1404	0/0:21,0:21:54.17:0,54,874	0/0:20,0:20:48.14:0,48,755	1/1:8,15:23:42.14:1036,42,0	0/1:1,15:17:14.08:779,0,14	1/1:8,18:26:48.16:1187,48,0	1/1:7,14:21:36.12:887,36,0	1/1:5,19:25:51.17:1261,51,0	0/0:18,0:18:48.10:0,48,722	1/1:6,15:22:48.15:1060,48,0	1/1:7,16:23:51.14:1168,51,0	1/1:7,14:22:36.12:886,36,0	1/1:8,13:23:42.06:930,42,0	0/0:21,0:21:54.18:0,54,889	0/0:12,0:12:27.08:0,27,420	1/1:5,20:26:48.16:1182,48,0	1/1:8,20:30:18.97:1452,19,0	1/1:7,25:32:60.20:1480,60,0	1/1:0,9:9:24.08:591,24,0
chr10	38899788	.	AT	A	8010.83	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-2.991;DP=629;FS=16.659;HRun=9;HaplotypeScore=80.3336;InbreedingCoeff=0.9882;MQ=81.32;MQ0=7;MQRankSum=-0.122;QD=22.38;ReadPosRankSum=0.757;VQSLOD=3.8258;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:54.14:0,54,611	1/1:0,11:11:24.01:219,24,0	0/0:46,1:29:32.64:0,33,342	0/0:41,0:22:12.33:0,12,197	1/1:5,23:27:65.74:558,66,0	0/0:30,0:30:28.01:0,28,253	0/0:8,0:8:21.94:0,22,96	1/1:7,21:28:62.96:555,63,0	1/1:0,19:19:54.03:494,54,0	0/0:27,0:27:66.15:0,66,714	0/0:25,0:25:66.18:0,66,752	0/0:15,0:15:12.45:0,12,114	1/1:2,15:17:36.02:329,36,0	1/1:0,19:19:57.03:521,57,0	1/1:3,21:24:36.05:424,36,0	1/1:1,14:15:36.02:329,36,0	1/1:5,29:34:72.03:658,72,0	0/0:22,0:22:60.12:0,60,665	1/1:4,21:25:63:568,63,0	1/1:2,32:33:92.95:833,93,0	1/1:0,5:5:15.01:137,15,0	1/1:0,19:19:56.91:502,57,0	0/0:23,0:23:28.85:0,29,207	0/0:12,0:12:25.05:0,25,118	1/1:3,20:23:48.02:439,48,0	1/1:2,28:30:84.02:759,84,0	1/1:0,16:16:42.02:384,42,0	1/1:0,11:11:33.02:302,33,0
chr10	38900171	.	CG	C	3647.15	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=8.298;DP=502;FS=23.684;HRun=4;HaplotypeScore=69.4258;InbreedingCoeff=0.8654;MQ=57.56;MQ0=7;MQRankSum=-2.699;QD=11.65;ReadPosRankSum=3.571;VQSLOD=0.8206;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:67.28:0,67,848	1/1:12,0:11:8.97:76,9,0	0/0:16,1:8:14.69:0,15,102	0/0:10,2:3:3:0,3,29	1/1:15,0:14:20.99:188,21,0	1/1:13,0:13:11.43:93,11,0	1/1:14,1:13:12.75:122,13,0	1/1:17,0:16:29.72:237,30,0	1/1:17,0:17:23.88:194,24,0	0/0:21,0:21:26.76:0,27,411	0/0:25,0:25:49.35:0,49,512	0/0:9,0:9:19.22:0,19,169	1/1:13,0:13:3:27,3,0	1/1:17,0:17:23.90:194,24,0	1/1:21,1:21:41.93:369,42,0	1/1:18,1:19:20.96:186,21,0	1/1:28,0:29:44.51:387,45,0	0/0:23,0:23:48.92:0,49,540	1/1:17,0:16:29.54:229,30,0	1/1:27,0:26:62.53:492,63,0	1/1:17,0:17:17.94:158,18,0	1/1:13,0:13:17.83:131,18,0	0/0:16,0:16:26.95:0,27,268	0/0:35,0:35:59.05:0,59,531	1/1:1,4:5:3.01:35,3,0	1/1:22,0:22:41.88:339,42,0	1/1:19,0:19:18.01:162,18,0	1/1:4,0:4:3:28,3,0
chr10	38900174	.	GGAA	G	5845.10	PASS	AB=0.813;AC=33;AF=0.589;AN=56;BaseQRankSum=4.171;DP=511;FS=27.983;HRun=0;HaplotypeScore=74.1303;InbreedingCoeff=0.7222;MQ=60.05;MQ0=6;MQRankSum=-1.853;QD=19.04;ReadPosRankSum=4.973;VQSLOD=2.9105;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:84.27:0,84,1670	1/1:0,11:11:8.58:126,9,0	0/0:18,0:8:17.49:0,17,203	0/0:14,0:5:7.38:0,7,89	1/1:0,14:15:20.83:325,21,0	0/1:13,0:13:38.91:39,0,144	0/1:13,0:13:49.26:49,0,135	1/1:1,16:17:43.03:371,43,0	1/1:1,15:16:21.96:349,22,0	0/0:19,0:19:54.52:0,55,766	0/0:26,0:26:62.85:0,63,960	0/0:12,0:12:30.06:0,30,392	1/1:1,12:13:1.31:49,1,0	1/1:0,12:15:23.93:343,24,0	1/1:1,22:24:43.29:678,43,0	1/1:2,13:16:24:347,24,0	1/1:1,26:28:44.64:725,45,0	0/0:23,0:23:42.30:0,42,946	1/1:2,16:17:26.20:334,26,0	1/1:13,10:23:65.59:720,66,0	1/1:0,15:17:17.84:284,18,0	1/1:7,4:14:19.75:235,20,0	0/0:17,0:17:26.98:0,27,420	0/0:34,0:34:77.45:0,77,1006	0/0:8,0:8:12.27:0,12,102	1/1:1,21:23:35.66:525,36,0	1/1:0,18:19:17.93:299,18,0	0/1:1,4:5:11.52:47,0,12
chr10	38900372	.	T	TA	6885.43	PASS	AB=0.610;AC=41;AF=0.732;AN=56;BaseQRankSum=6.328;DP=613;FS=3.238;HRun=12;HaplotypeScore=93.5746;InbreedingCoeff=0.6610;MQ=71.04;MQ0=0;MQRankSum=-0.746;QD=14.23;ReadPosRankSum=-0.002;VQSLOD=5.1614;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:50.24:0,50,482	1/1:2,6:8:14.92:133,15,0	0/0:10,0:11:7.94:0,8,50	0/0:16,0:15:14.37:0,14,97	1/1:13,12:28:2.70:301,3,0	1/1:4,1:21:43.04:243,43,0	1/1:6,4:25:43.54:288,44,0	1/1:9,14:24:23.02:372,23,0	1/1:2,24:27:35.01:483,35,0	0/0:30,1:32:35.28:0,35,401	0/0:18,0:18:26.71:0,27,197	1/1:10,0:17:30.04:161,30,0	1/1:3,15:18:14.14:290,14,0	1/1:6,18:25:16.98:310,17,0	1/1:5,19:25:23.06:373,23,0	1/1:5,20:25:10.27:423,10,0	1/1:7,15:22:20.16:358,20,0	0/0:16,0:19:37.81:0,38,268	1/1:8,11:20:12.28:292,12,0	0/1:12,15:27:12.25:327,0,12	1/1:3,19:22:41.22:432,41,0	1/1:4,17:21:44.94:414,45,0	1/1:3,0:20:37.21:196,37,0	1/1:4,0:20:31.21:157,31,0	1/1:3,13:17:1.97:167,2,0	0/1:6,24:32:7.58:568,0,8	1/1:8,19:30:56.44:495,56,0	0/1:4,6:10:6.87:101,0,7
chr10	38901260	.	G	GT	7010.43	PASS	AB=0.881;AC=38;AF=0.679;AN=56;BaseQRankSum=1.456;DP=615;FS=4.083;HRun=8;HaplotypeScore=89.2001;InbreedingCoeff=0.6425;MQ=58.76;MQ0=17;MQRankSum=0.223;QD=16.30;ReadPosRankSum=-0.244;VQSLOD=4.8863;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:53:99:0,127,1323	0/1:3,9:12:6.64:185,0,7	0/1:20,1:7:6.14:6,0,36	0/0:29,0:13:0.47:0,0,94	1/1:7,18:25:25.44:513,25,0	0/1:16,0:16:1.55:32,0,2	1/1:21,0:19:4.61:36,5,0	1/1:33,2:34:67.12:665,67,0	1/1:4,11:15:26.99:290,27,0	0/0:30,0:30:80.73:0,81,745	0/0:17,0:17:43.70:0,44,392	0/0:9,0:7:1.84:0,2,5	1/1:1,11:13:9.03:108,9,0	1/1:9,5:14:21.05:243,21,0	1/1:5,15:20:27.05:307,27,0	1/1:3,23:25:41.66:457,42,0	1/1:2,34:34:57.07:661,57,0	0/0:33,0:33:74.83:0,75,712	1/1:20,0:19:50.50:473,51,0	1/1:21,1:22:43.33:413,43,0	1/1:7,0:7:15.34:120,15,0	1/1:2,19:20:45.13:522,45,0	0/1:12,0:10:1.41:19,0,1	0/0:13,0:11:8.29:0,8,32	1/1:23,1:24:56.91:597,57,0	1/1:23,2:24:44.87:478,45,0	1/1:31,0:31:65.78:592,66,0	1/1:14,0:14:30.04:292,30,0
chr10	38901267	.	TG	T	2807.61	PASS	AB=0.996;AC=35;AF=0.625;AN=56;BaseQRankSum=6.539;DP=578;FS=3.660;HRun=1;HaplotypeScore=91.4225;InbreedingCoeff=0.3670;MQ=55.26;MQ0=22;MQRankSum=-4.588;QD=7.43;ReadPosRankSum=-2.553;VQSLOD=0.0173;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:55,1:55:84.71:0,85,1101	0/1:12,0:12:17.16:17,0,56	0/1:20,0:6:4.16:4,0,24	0/1:25,1:10:18.63:19,0,76	0/1:22,0:22:43.35:69,0,43	1/1:14,0:14:37.06:283,37,0	1/1:18,0:16:38.63:281,39,0	1/1:27,1:27:22.14:279,22,0	0/1:15,0:16:15.74:16,0,23	0/0:31,0:29:82.94:0,83,762	0/1:19,0:19:14.79:15,0,328	1/1:8,0:6:13.26:115,13,0	0/1:12,0:12:1.91:2,0,19	0/1:11,0:11:18.49:18,0,35	0/0:20,0:20:22.60:0,23,83	0/0:25,0:24:13.99:0,14,80	0/0:35,0:33:33.41:0,33,107	0/0:33,0:33:71.78:0,72,714	1/1:18,0:17:42.78:230,43,0	1/1:17,2:19:47.05:270,47,0	1/1:7,0:7:11.70:51,12,0	0/1:20,0:18:22.66:35,0,23	1/1:11,0:9:11.85:99,12,0	1/1:10,1:9:20.73:150,21,0	1/1:22,1:22:52.51:296,53,0	1/1:21,1:20:36.69:220,37,0	1/1:31,0:31:69.13:353,69,0	1/1:10,0:10:29.29:182,29,0
chr10	38901268	.	GT	G	911.87	PASS	AB=0.985;AC=21;AF=0.375;AN=56;BaseQRankSum=6.369;DP=578;FS=17.078;HRun=13;HaplotypeScore=99.4675;InbreedingCoeff=0.3799;MQ=54.93;MQ0=22;MQRankSum=-1.025;QD=3.45;ReadPosRankSum=1.114;VQSLOD=-0.1214;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:53,3:56:10.96:0,11,703	0/0:12,0:12:17.99:0,18,164	0/0:20,0:6:4.53:0,5,25	0/1:26,0:10:1.59:2,0,32	0/0:22,0:22:26.45:0,26,264	0/1:14,0:14:3.70:4,0,28	1/1:17,0:15:3.87:13,4,0	0/1:26,1:26:35.18:132,0,35	0/0:16,0:17:14.36:0,14,202	0/0:31,0:30:65.87:0,66,607	0/1:17,2:19:22.96:23,0,212	0/1:8,0:6:8.19:8,0,12	0/0:9,0:10:9.01:0,9,86	0/0:10,0:10:9.23:0,9,145	0/0:20,0:21:30.03:0,30,280	0/0:24,0:24:37.62:0,38,358	0/0:35,0:33:56.13:0,56,530	0/0:30,1:33:18.48:0,18,519	1/1:17,1:17:27.33:146,27,0	1/1:18,1:19:23.12:166,23,0	1/1:7,0:7:4.97:29,5,0	0/0:18,0:18:23.10:0,23,290	0/1:11,0:9:2.26:10,0,2	0/1:12,0:10:1.48:8,0,1	0/1:23,0:22:4.43:121,0,4	0/1:22,0:20:31:101,0,31	1/1:28,3:31:16.18:213,16,0	1/1:10,0:10:24.25:115,24,0
chr10	38901967	.	T	TTATGG	23175.90	PASS	AB=0.550;AC=33;AF=0.589;AN=56;BaseQRankSum=12.402;DP=756;FS=6.246;HRun=0;HaplotypeScore=147.7578;InbreedingCoeff=0.9485;MQ=72.04;MQ0=0;MQRankSum=-15.769;QD=49.21;ReadPosRankSum=-0.250;VQSLOD=4.9616;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,111,2376	1/1:0,12:12:26.91:752,27,0	0/0:27,0:24:61.77:0,62,1084	0/0:22,0:21:53.50:0,54,925	1/1:3,26:29:44.71:951,45,0	0/0:21,0:21:63.18:0,63,1252	0/0:30,0:30:90.24:0,90,1739	1/1:13,24:38:95.72:1653,96,0	1/1:6,27:34:81.24:2457,81,0	0/0:30,0:30:84.20:0,84,1719	0/0:13,0:13:33.08:0,33,635	0/0:27,0:27:81.26:0,81,1704	1/1:4,22:28:47.89:1506,48,0	1/1:3,34:38:60.21:1885,60,0	1/1:2,30:35:53.76:1695,54,0	1/1:5,40:48:90.31:2811,90,0	1/1:2,14:16:15.05:434,15,0	0/0:22,0:22:66.18:0,66,1372	1/1:6,19:27:78.14:1504,78,0	1/1:6,18:25:41.91:1011,42,0	1/1:4,12:19:23.67:577,24,0	1/1:5,18:26:38.71:849,39,0	0/0:24,0:24:66.17:0,66,1271	0/0:29,0:29:84.24:0,84,1690	1/1:2,16:20:30.10:886,30,0	0/1:6,26:33:1.81:2114,0,2	1/1:3,27:31:60:1861,60,0	1/1:2,8:12:12.43:231,12,0
chr10	38904217	.	C	CA	1249.74	PASS	AB=0.980;AC=37;AF=0.685;AN=54;BaseQRankSum=8.538;DP=411;FS=5.231;HRun=10;HaplotypeScore=127.6717;InbreedingCoeff=0.6136;MQ=55.33;MQ0=7;MQRankSum=-8.621;QD=5.71;ReadPosRankSum=-1.982;VQSLOD=1.1440;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,1:22:27.89:0,28,432	1/1:8,0:8:10.17:51,10,0	0/0:55,0:15:10.58:0,11,98	0/0:56,0:9:14.90:0,15,102	1/1:16,0:15:18.15:85,18,0	0/0:13,0:14:27.78:0,28,202	0/1:15,1:16:2.05:2,0,191	0/1:16,0:14:35.30:35,0,36	0/1:11,0:10:3.11:22,0,3	0/0:8,0:8:23.96:0,24,195	0/0:13,0:13:17.90:0,18,141	1/1:2,4:6:15.04:158,15,0	1/1:9,0:8:2.07:9,2,0	1/1:8,0:7:6.76:30,7,0	1/1:7,0:7:4.64:20,5,0	1/1:11,0:10:19.14:116,19,0	1/1:18,0:17:25.65:136,26,0	0/0:23,0:23:56.20:0,56,461	1/1:12,0:11:8.30:34,8,0	1/1:14,0:13:11.70:45,12,0	./.	1/1:6,0:6:11.95:66,12,0	1/1:10,3:13:21.01:210,21,0	1/1:4,5:9:24.06:254,24,0	1/1:13,0:13:0.44:100,0,0	1/1:14,0:12:5.86:23,6,0	1/1:4,0:4:2.38:12,2,0	1/1:8,0:8:6.68:28,7,0
chr10	38904221	.	A	AAC	2324.50	PASS	AB=0.881;AC=25;AF=0.463;AN=54;BaseQRankSum=9.936;DP=434;FS=6.888;HRun=0;HaplotypeScore=130.5559;InbreedingCoeff=0.4656;MQ=56.79;MQ0=7;MQRankSum=-9.767;QD=13.13;ReadPosRankSum=2.221;VQSLOD=3.4171;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:62.80:0,63,902	1/1:4,5:9:20.18:236,20,0	0/0:64,0:16:31.61:0,32,288	0/0:66,0:15:37.49:0,37,247	1/1:9,6:15:21.06:371,21,0	0/0:12,0:12:29.95:0,30,400	0/0:16,0:16:44.68:0,45,544	0/1:14,2:14:97.99:171,0,98	1/1:12,0:11:6.74:101,7,0	0/0:9,0:9:27.09:0,27,391	0/0:12,0:12:27.02:0,27,327	0/0:7,0:7:17.04:0,17,87	0/1:8,1:8:9.27:43,0,9	1/1:7,1:7:16.08:84,16,0	1/1:6,1:7:14.91:154,15,0	1/1:9,2:11:25.89:209,26,0	1/1:13,5:18:29.38:380,29,0	0/0:24,0:24:66.17:0,66,933	1/1:10,3:12:4.61:206,5,0	0/1:9,4:12:3.40:144,0,3	./.	1/1:3,2:6:12.43:156,12,0	0/0:13,0:13:27.59:0,28,155	0/0:11,0:11:22.52:0,23,96	0/1:12,0:12:47.41:53,0,47	0/1:10,3:11:31.35:102,0,31	0/1:4,0:4:28.21:33,0,28	0/1:6,1:8:27.73:78,0,28
chr10	38904222	.	A	AC	657.59	PASS	AB=0.973;AC=22;AF=0.407;AN=54;BaseQRankSum=6.709;DP=436;FS=10.372;HRun=0;HaplotypeScore=132.4448;InbreedingCoeff=-0.1617;MQ=57.80;MQ0=7;MQRankSum=-5.566;QD=3.15;ReadPosRankSum=4.215;VQSLOD=2.5831;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:56.23:0,56,815	1/1:9,0:9:13.14:119,13,0	0/0:63,0:17:34.64:0,35,290	0/0:65,0:15:30.98:0,31,269	0/1:14,2:15:9.19:131,0,9	0/0:12,0:12:30.03:0,30,377	0/0:16,0:16:34.67:0,35,493	0/1:16,0:14:5.14:5,0,108	0/1:12,0:11:8.65:9,0,35	0/0:10,0:10:27.09:0,27,363	0/0:11,0:11:33.06:0,33,370	0/1:7,0:7:16.28:16,0,51	0/1:9,0:8:10.24:10,0,32	0/1:8,0:7:2.92:3,0,34	0/1:8,0:8:9.04:34,0,9	0/1:12,0:11:12.48:36,0,12	1/1:19,0:18:6.79:102,7,0	0/0:23,0:23:66.17:0,66,867	0/1:13,0:12:30.65:44,0,31	0/1:13,0:12:25.29:31,0,25	./.	1/1:6,0:6:4.38:62,4,0	0/1:12,0:12:12.10:12,0,87	0/1:12,0:12:28.44:28,0,49	0/1:8,4:12:40.75:152,0,41	0/1:12,1:11:14.22:14,0,48	0/1:4,0:4:0.49:0,0,30	0/1:8,0:8:8.40:8,0,54
chr10	38904233	.	CTT	C	2555.33	PASS	AB=0.944;AC=29;AF=0.537;AN=54;BaseQRankSum=10.812;DP=473;FS=9.459;HRun=8;HaplotypeScore=145.7133;InbreedingCoeff=0.8678;MQ=65.96;MQ0=8;MQRankSum=-10.413;QD=14.36;ReadPosRankSum=3.867;VQSLOD=0.4441;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:51.03:0,51,718	1/1:6,3:9:15.37:138,15,0	0/0:82,1:23:38.11:0,38,456	0/0:80,0:25:7.88:0,8,474	1/1:13,3:16:31.41:274,31,0	0/0:12,0:12:18.06:0,18,263	0/0:15,0:15:39.11:0,39,502	0/1:16,1:16:4.79:180,0,5	1/1:8,1:9:15.77:146,16,0	0/0:13,0:13:36.12:0,36,604	0/0:12,0:12:36.12:0,36,585	0/0:9,0:9:23.09:0,23,281	1/1:8,1:9:18.12:106,18,0	1/1:5,2:6:15.21:118,15,0	1/1:9,1:10:23.31:204,23,0	1/1:10,2:12:14.36:193,14,0	1/1:16,2:18:14.50:198,15,0	0/0:20,0:20:51.17:0,51,821	1/1:9,4:13:34.68:285,35,0	1/1:11,4:14:32.38:244,32,0	./.	1/1:3,2:5:5.73:46,6,0	0/0:12,0:12:35.91:0,36,380	0/0:14,0:15:17.43:0,17,402	1/1:15,1:17:34.75:257,35,0	1/1:15,2:16:40.31:302,40,0	0/0:1,0:1:0:0,0,0	1/1:4,0:4:8.94:73,9,0
chr10	38904239	.	TTTG	T	4731.63	PASS	AB=1.000;AC=31;AF=0.596;AN=52;BaseQRankSum=9.896;DP=474;FS=15.694;HRun=0;HaplotypeScore=148.9678;InbreedingCoeff=0.8958;MQ=68.37;MQ0=9;MQRankSum=-9.081;QD=25.86;ReadPosRankSum=3.968;VQSLOD=4.2292;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:54.14:0,54,877	1/1:6,4:10:26.80:298,27,0	0/0:91,0:27:38.76:0,39,599	0/0:85,0:29:11.14:0,11,577	1/1:5,11:16:32.14:566,32,0	0/0:9,0:9:18.04:0,18,242	0/0:16,0:16:20:0,20,428	1/1:5,0:14:27.44:248,27,0	1/1:4,7:11:18.84:312,19,0	0/0:15,0:15:42.72:0,43,759	0/0:13,0:13:36.04:0,36,701	0/0:8,0:8:24.01:0,24,254	1/1:5,3:8:20.89:235,21,0	1/1:4,3:7:20.91:275,21,0	1/1:1,8:9:24.08:401,24,0	1/1:3,7:10:17.81:386,18,0	1/1:4,11:15:22.97:443,23,0	0/0:18,0:18:51.17:0,51,1055	1/1:4,0:12:35:328,35,0	1/1:9,0:13:32.65:291,33,0	./.	1/1:6,1:7:17.66:149,18,0	0/1:15,0:15:19.43:19,0,303	0/0:15,0:15:16.61:0,17,334	1/1:4,0:14:35.02:316,35,0	1/1:5,0:18:45.01:377,45,0	./.	1/1:1,0:4:8.71:87,9,0
chr10	38904241	.	TG	T	2415.54	PASS	AC=40;AF=0.769;AN=52;BaseQRankSum=5.233;DP=479;FS=6.828;HRun=11;HaplotypeScore=146.2869;InbreedingCoeff=0.8471;MQ=70.14;MQ0=10;MQRankSum=-6.425;QD=10.41;ReadPosRankSum=1.897;VQSLOD=1.7156;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:18:9.12:0,9,156	1/1:10,0:10:20.65:145,21,0	0/0:90,0:27:18.93:0,19,146	0/0:86,0:32:6.27:0,6,158	1/1:16,0:16:35.09:218,35,0	1/1:7,2:9:5.98:49,6,0	1/1:7,9:16:14.07:203,14,0	1/1:12,0:14:14.96:45,15,0	1/1:11,0:11:20.34:118,20,0	0/0:15,0:15:3.16:0,3,193	0/0:15,0:15:7.05:0,7,230	1/1:6,1:8:16.99:123,17,0	1/1:8,0:8:20.08:131,20,0	1/1:9,0:9:23.37:148,23,0	1/1:9,0:9:23.12:127,23,0	1/1:9,0:9:23.22:135,23,0	1/1:14,0:14:29.09:167,29,0	0/0:18,0:18:31.49:0,31,344	1/1:12,0:12:19.65:61,20,0	1/1:13,0:13:17.88:52,18,0	./.	1/1:8,0:8:17.83:124,18,0	1/1:8,6:15:35.07:262,35,0	1/1:11,3:15:40.75:307,41,0	1/1:14,0:14:21.83:67,22,0	1/1:17,0:18:27.74:85,28,0	./.	1/1:4,0:4:5.73:17,6,0
chr10	38904250	.	GGGT	G	647.13	PASS	AB=0.953;AC=11;AF=0.196;AN=56;BaseQRankSum=7.195;DP=455;FS=19.393;HRun=0;HaplotypeScore=140.8599;InbreedingCoeff=-0.0519;MQ=65.42;MQ0=7;MQRankSum=-6.316;QD=5.44;ReadPosRankSum=3.192;VQSLOD=1.2637;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:28.62:0,29,374	0/0:8,0:8:14.38:0,14,74	0/0:78,0:26:44.27:0,44,396	0/0:75,0:26:7.86:0,8,387	0/0:16,0:16:2.83:0,3,62	0/0:8,0:8:11.72:0,12,85	0/0:15,0:15:38.67:0,39,364	0/1:15,0:15:63.62:64,0,81	0/1:11,0:11:10.26:10,0,48	0/0:12,0:12:30.07:0,30,427	0/0:13,0:13:35.26:0,35,605	0/0:8,0:8:20.49:0,20,117	0/1:9,0:9:13.73:14,0,46	0/1:9,0:9:8.59:9,0,37	0/0:9,0:9:3.12:0,3,24	0/0:10,0:10:19.71:0,20,100	0/0:12,0:12:5.52:0,6,66	0/0:16,0:16:41.94:0,42,641	0/1:16,1:17:82.68:108,0,83	0/1:13,4:17:43.52:210,0,44	0/0:2,0:2:5.90:0,6,37	0/0:7,0:7:20.60:0,21,173	0/0:14,0:14:36.88:0,37,292	0/0:19,0:19:46.32:0,46,326	0/1:12,2:14:7.69:132,0,8	0/1:18,1:19:12.03:183,0,12	0/1:4,0:4:22.22:22,0,30	1/1:4,0:4:8.29:40,8,0
chr10	38905089	.	TG	T	3073	PASS	AB=0.972;AC=35;AF=0.625;AN=56;BaseQRankSum=2.222;DP=478;FS=9.406;HRun=2;HaplotypeScore=127.5588;InbreedingCoeff=0.9256;MQ=69.43;MQ0=8;MQRankSum=-3.719;QD=11.05;ReadPosRankSum=1.707;VQSLOD=1.3034;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:47.28:0,47,459	1/1:5,0:5:12.83:59,13,0	0/0:45,1:18:27.76:0,28,319	0/1:33,1:17:2.92:3,0,158	1/1:25,0:25:56.27:337,56,0	0/0:13,0:13:25.03:0,25,152	0/0:24,0:24:50.51:0,51,291	1/1:2,17:21:20.84:325,21,0	1/1:11,2:13:32.10:179,32,0	0/0:19,1:20:48.01:0,48,483	0/0:10,0:10:24.36:0,24,256	0/0:10,0:10:17.93:0,18,102	1/1:7,0:7:17.66:124,18,0	1/1:16,0:17:41.49:248,41,0	1/1:14,2:16:33.81:180,34,0	1/1:13,0:13:32.44:146,32,0	1/1:22,0:21:57.95:394,58,0	0/0:19,0:19:35.73:0,36,332	1/1:13,0:14:32.73:263,33,0	1/1:6,1:9:9.44:76,9,0	1/1:11,0:11:11.19:80,11,0	1/1:6,0:6:16.94:110,17,0	0/0:17,0:17:33.15:0,33,169	0/0:17,0:17:43.09:0,43,272	1/1:15,2:17:28.98:223,29,0	1/1:17,1:19:43.14:312,43,0	1/1:12,0:13:15.83:86,16,0	1/1:8,0:13:23.48:149,23,0
chr10	38905094	.	T	TG	1528.01	PASS	AB=0.782;AC=25;AF=0.446;AN=56;BaseQRankSum=2.592;DP=557;FS=21.350;HRun=0;HaplotypeScore=159.1344;InbreedingCoeff=-0.0505;MQ=59.98;MQ0=16;MQRankSum=-8.400;QD=4.03;ReadPosRankSum=0.124;VQSLOD=2.0506;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:72.83:0,73,646	0/1:5,1:6:6.84:7,0,79	0/0:53,0:13:21.89:0,22,185	0/1:38,0:15:15.92:16,0,108	0/1:21,9:30:99:135,0,157	1/1:13,0:13:21.59:121,22,0	1/1:22,0:22:28.75:152,29,0	0/1:26,7:32:99:160,0,260	0/0:11,0:11:9.54:0,10,140	0/0:22,0:22:56.95:0,57,485	0/0:11,0:11:32.38:0,32,325	1/1:9,0:9:16.52:63,17,0	0/1:6,7:13:97.58:98,0,99	0/1:14,6:20:83.37:83,0,124	0/1:14,4:18:4.99:5,0,166	0/0:11,0:11:30.83:0,31,151	0/1:21,4:24:4.96:5,0,286	0/0:22,0:22:53.96:0,54,499	0/1:15,8:18:99:141,0,100	0/1:11,10:18:75.43:165,0,75	0/1:7,3:9:23.06:23,0,49	0/1:5,3:8:46.16:51,0,46	1/1:13,1:14:23.01:78,23,0	1/1:17,0:17:28.64:155,29,0	0/0:15,0:15:27.33:0,27,191	0/1:14,6:20:99:101,0,207	0/1:15,7:22:93.68:94,0,242	0/1:11,5:16:58.10:58,0,174
chr10	38905098	.	T	TGTTTGTTTG	10598.77	PASS	AB=0.987;AC=18;AF=0.321;AN=56;BaseQRankSum=9.718;DP=582;FS=29.557;HRun=0;HaplotypeScore=259.5635;InbreedingCoeff=-0.3125;MQ=62.19;MQ0=16;MQRankSum=-8.515;QD=34.64;ReadPosRankSum=6.253;VQSLOD=3.0753;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:92.83:0,93,1541	0/1:7,0:7:56.69:244,0,57	0/0:57,0:12:20.71:0,21,301	0/0:43,0:18:23.80:0,24,443	0/1:30,0:30:99:1349,0,206	0/0:16,0:16:22.88:0,23,549	0/0:26,0:26:44.33:0,44,944	0/1:32,0:31:99:831,0,645	0/1:12,1:14:59.49:597,0,59	0/0:22,0:22:66.17:0,66,1263	0/0:11,0:11:30.09:0,30,694	0/0:9,0:9:14.13:0,14,424	0/1:12,0:12:45.04:681,0,45	0/1:20,0:20:29.99:1232,0,30	0/1:18,0:18:83.46:786,0,83	1/1:11,0:11:25.05:736,25,0	0/1:23,0:22:99:485,0,259	0/0:22,0:22:54.18:0,54,1262	0/1:22,0:19:92.34:762,0,92	0/1:21,0:17:99:724,0,105	0/1:11,0:10:99:250,0,137	0/1:9,0:9:62.39:393,0,62	0/0:17,0:17:33.72:0,34,776	0/0:19,0:19:41.61:0,42,675	0/1:15,0:15:25.94:26,0,279	0/1:21,0:21:99:459,0,556	0/1:22,0:22:99:517,0,471	0/1:16,0:16:99:527,0,394
chr10	38905102	.	T	TGTTTGTTTGTTTG	22270.30	PASS	AB=1.000;AC=26;AF=0.464;AN=56;BaseQRankSum=1.534;DP=592;FS=16.091;HRun=0;HaplotypeScore=264.9278;InbreedingCoeff=0.4191;MQ=61.03;MQ0=16;MQRankSum=-9.137;QD=70.03;ReadPosRankSum=6.727;VQSLOD=3.2120;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:88.66:0,89,1923	1/1:6,0:6:17.99:590,18,0	0/0:58,0:12:22.78:0,23,338	0/0:43,0:19:15.66:0,16,469	0/1:30,0:30:5.75:2792,0,6	0/0:15,0:15:34.04:0,34,636	0/0:24,0:24:57.67:0,58,1113	0/1:35,0:34:99:1376,0,366	1/1:14,1:15:20.52:1310,21,0	0/0:22,0:22:63.18:0,63,1497	0/0:11,0:11:30.10:0,30,952	0/0:9,0:9:23.15:0,23,570	1/1:13,0:13:11.32:1275,11,0	1/1:20,0:20:33.16:2386,33,0	1/1:17,0:17:43.94:1771,44,0	1/1:10,7:20:33.11:1557,33,0	1/1:22,0:21:28.13:1425,28,0	0/0:22,0:22:57.18:0,57,1444	1/1:26,0:21:9.88:1543,10,0	0/1:21,0:17:47.50:1456,0,48	0/1:11,0:10:58.42:545,0,58	1/1:8,0:8:11.01:738,11,0	0/0:19,0:19:49.87:0,50,1101	0/0:18,0:18:48.13:0,48,1002	0/1:13,0:13:38.47:224,0,38	0/1:22,0:22:99:994,0,282	0/1:23,0:23:99:1164,0,311	0/1:16,0:16:99:1124,0,132
chr10	38905103	.	T	TGTTTGTTTGTTTG	21672.07	PASS	AB=1.000;AC=27;AF=0.482;AN=56;BaseQRankSum=2.823;DP=595;FS=19.770;HRun=0;HaplotypeScore=268.4801;InbreedingCoeff=0.4858;MQ=61.00;MQ0=16;MQRankSum=-8.980;QD=67.10;ReadPosRankSum=7.251;VQSLOD=3.2257;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:88.18:0,88,1962	1/1:4,2:6:11.43:645,11,0	0/0:59,0:12:16.03:0,16,355	0/0:44,0:19:12.80:0,13,469	1/1:17,4:30:57.97:2899,58,0	0/0:14,0:14:30.01:0,30,590	0/0:22,0:22:50.75:0,51,1024	0/1:35,0:34:99:1047,0,337	1/1:10,4:15:14.87:1195,15,0	0/0:23,0:23:66.17:0,66,1618	0/0:11,0:11:33.10:0,33,995	0/0:9,0:9:22.50:0,23,556	1/1:11,1:13:30.61:1221,31,0	1/1:11,4:20:38.07:2454,38,0	1/1:9,7:17:43.95:1909,44,0	1/1:12,6:21:32.60:1591,33,0	1/1:17,3:22:34.03:1561,34,0	0/0:22,0:22:57.18:0,57,1460	1/1:25,0:21:25.34:1283,25,0	0/1:22,0:18:28.84:1333,0,29	0/1:11,0:10:53.96:434,0,54	1/1:7,1:8:21.99:710,22,0	0/0:19,0:19:53.86:0,54,1093	0/0:18,0:18:48.06:0,48,904	0/1:13,0:13:40.17:247,0,40	0/1:22,0:22:99:946,0,259	0/1:25,0:25:99:1118,0,266	0/1:16,0:16:90.65:1077,0,91
chr10	38905110	.	T	TA	4068.53	PASS	AB=0.891;AC=30;AF=0.536;AN=56;BaseQRankSum=3.413;DP=561;FS=5.340;HRun=1;HaplotypeScore=150.8955;InbreedingCoeff=0.5509;MQ=64.93;MQ0=13;MQRankSum=-5.020;QD=11.49;ReadPosRankSum=2.900;VQSLOD=2.3145;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:31:83.40:0,83,615	1/1:2,2:4:11.96:99,12,0	0/1:48,0:12:8.82:9,0,97	0/0:37,0:18:2.79:0,3,138	1/1:18,4:23:45.93:319,46,0	0/0:12,0:13:29.44:0,29,185	0/0:24,0:24:57.21:0,57,362	0/1:32,0:31:27.96:377,0,28	1/1:9,4:15:29.91:259,30,0	0/0:22,0:22:61.12:0,61,522	0/0:12,0:12:34.81:0,35,301	0/0:9,0:9:23.41:0,23,136	1/1:12,1:13:35.01:280,35,0	1/1:14,4:18:38.28:283,38,0	1/1:8,7:17:29.75:285,30,0	1/1:15,6:21:28.01:225,28,0	1/1:19,3:21:34.19:298,34,0	0/0:21,0:22:44.82:0,45,358	1/1:26,0:22:32.56:417,33,0	1/1:22,0:19:24.56:337,25,0	0/1:10,0:10:11.45:73,0,11	1/1:8,1:9:21.73:164,22,0	0/0:19,0:19:52.72:0,53,326	0/0:17,0:17:50:0,50,310	0/1:4,1:19:3.32:13,0,3	1/1:13,0:15:2.67:230,3,0	0/1:22,0:25:81.05:257,0,81	0/1:12,0:14:72.74:144,0,73
chr10	38906530	.	CT	C	1883.02	PASS	AB=0.600;AC=21;AF=0.375;AN=56;BaseQRankSum=-2.500;DP=512;FS=0.450;HRun=14;HaplotypeScore=80.4921;InbreedingCoeff=0.7929;MQ=62.20;MQ0=12;MQRankSum=1.678;QD=8.97;ReadPosRankSum=0.669;VQSLOD=3.0192;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:24:41.56:0,42,411	0/0:4,0:10:11.95:0,12,64	0/0:12,0:5:8.65:0,9,48	0/0:11,0:6:2.74:0,3,21	0/0:11,0:19:25.64:0,26,169	0/0:20,1:21:22.72:0,23,292	0/0:16,0:15:30.50:0,30,277	1/1:6,13:19:4.58:166,5,0	0/0:6,0:12:14.84:0,15,86	0/0:16,0:16:17.86:0,18,154	0/0:10,1:10:3.31:0,3,152	1/1:8,8:16:10.85:67,11,0	0/0:8,0:16:18.74:0,19,104	0/0:2,0:10:14.20:0,14,72	0/0:10,0:25:21.71:0,22,110	0/0:10,0:26:16.37:0,16,99	0/0:7,0:21:29.62:0,30,173	0/0:21,0:20:35.73:0,36,318	1/1:12,8:24:40.82:244,41,0	1/1:12,14:26:39.12:298,39,0	1/1:3,2:5:5.94:41,6,0	0/0:21,0:26:30.22:0,30,196	0/1:7,14:21:25.78:123,0,26	1/1:8,15:22:27.43:274,27,0	1/1:8,6:17:5.95:169,6,0	1/1:7,17:24:46.54:313,47,0	1/1:8,15:23:39.74:258,40,0	1/1:4,5:9:20.45:134,20,0
chr10	38906647	.	T	TGA	835.88	PASS	AB=0.954;AC=20;AF=0.417;AN=48;BaseQRankSum=-0.103;DP=187;FS=6.718;HRun=0;HaplotypeScore=33.3631;InbreedingCoeff=-0.1246;MQ=69.04;MQ0=38;MQRankSum=4.476;QD=11.77;ReadPosRankSum=-1.976;VQSLOD=1.7576;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:10:21.13:0,21,235	./.	0/0:36,0:9:14.59:0,15,218	0/0:26,0:10:21.83:0,22,152	0/1:2,2:3:0.02:29,0,0	1/1:1,0:1:3.01:49,3,0	./.	0/1:5,1:6:57.53:58,0,77	0/1:3,0:2:16.25:38,0,16	0/0:4,0:4:12.04:0,12,187	0/0:11,0:8:23.86:0,24,250	0/0:2,0:1:3.01:0,3,41	./.	1/1:6,0:3:9.03:140,9,0	0/1:5,0:5:9.59:101,0,10	0/1:3,0:3:34.73:38,0,35	0/1:12,0:6:48.27:94,0,48	0/0:13,0:10:22.68:0,23,242	0/1:8,0:5:33.01:33,0,98	1/1:2,0:1:3.01:49,3,0	1/1:3,0:2:1.83:42,2,0	0/1:3,0:3:14.23:73,0,14	0/1:3,0:3:19.24:79,0,19	0/0:5,0:1:2.68:0,3,11	0/1:2,0:2:10.48:42,0,10	0/1:4,0:3:35.71:36,0,84	0/1:5,0:3:33.39:83,0,33	./.
chr10	38906743	.	AG	A	9610.33	PASS	AB=0.857;AC=45;AF=0.804;AN=56;BaseQRankSum=11.526;DP=386;FS=19.814;HRun=1;HaplotypeScore=88.6153;InbreedingCoeff=0.8854;MQ=60.69;MQ0=15;MQRankSum=0.325;QD=30.80;ReadPosRankSum=1.279;VQSLOD=3.3094;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:27:78.26:0,78,1230	1/1:0,4:4:12.04:140,12,0	0/0:11,1:9:24.08:0,24,383	0/1:5,1:5:10.28:10,0,123	1/1:0,11:11:30.09:348,30,0	1/1:0,14:14:39.12:455,39,0	1/1:0,9:9:27.08:315,27,0	1/1:3,18:18:48.12:537,48,0	1/1:1,11:11:33.10:385,33,0	0/0:7,0:7:18.06:0,18,280	0/0:8,0:8:24.08:0,24,383	1/1:2,10:10:24.07:280,24,0	1/1:0,8:8:24.07:278,24,0	1/1:0,16:16:45.13:525,45,0	1/1:0,20:20:60.18:697,60,0	1/1:0,12:12:33.10:385,33,0	1/1:2,20:21:37.97:608,38,0	0/0:16,0:15:45.11:0,45,684	1/1:2,10:10:30.09:350,30,0	1/1:0,14:14:36.11:420,36,0	1/1:1,20:20:60.18:700,60,0	1/1:0,7:7:21.06:245,21,0	1/1:0,17:17:48.14:560,48,0	1/1:2,20:20:54.16:627,54,0	1/1:0,9:9:27.08:315,27,0	1/1:0,21:21:63.18:729,63,0	1/1:0,14:14:36.11:420,36,0	1/1:0,8:8:24.07:280,24,0
chr10	38908359	.	ATCT	A	69.34	PASS	AB=0.957;AC=14;AF=0.250;AN=56;BaseQRankSum=10.281;DP=352;FS=52.229;HRun=0;HaplotypeScore=79.6367;InbreedingCoeff=-0.1576;MQ=80.68;MQ0=7;MQRankSum=-6.357;QD=0.64;ReadPosRankSum=3.689;VQSLOD=-0.4888;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:66.65:0,67,864	1/1:1,0:1:0.47:1,0,0	0/0:30,0:18:7.56:0,8,165	0/0:26,0:14:15.27:0,15,152	0/0:16,0:16:0.90:0,1,95	0/0:17,0:17:32.17:0,32,201	0/1:15,0:14:22.01:22,0,73	0/0:31,0:30:23.37:0,23,253	0/1:8,0:8:0.49:13,0,0	0/0:10,0:10:25.64:0,26,255	0/0:13,0:12:17.10:0,17,180	0/0:3,0:3:4.41:0,4,14	0/1:7,0:7:5.12:5,0,93	0/1:4,0:5:27.32:30,0,27	0/1:8,0:8:1.48:1,0,39	0/1:5,0:5:2.28:2,0,39	0/0:16,0:16:10.26:0,10,85	0/0:13,0:13:35.91:0,36,493	0/0:16,0:15:19.82:0,20,161	0/0:13,0:13:1.26:0,1,74	0/1:7,0:8:19.22:19,0,31	0/1:8,0:8:2.89:3,0,45	0/1:6,0:6:4.67:5,0,75	0/1:11,5:16:52.22:52,0,116	0/0:7,0:7:1.93:0,2,43	0/1:9,0:7:7.12:7,0,67	0/1:12,0:12:25.25:36,0,25	0/0:7,0:6:9.71:0,10,52
chr10	38909063	.	A	ATTTT	4400.84	PASS	AB=1.000;AC=40;AF=0.769;AN=52;BaseQRankSum=4.967;DP=309;FS=1.943;HRun=3;HaplotypeScore=56.1084;InbreedingCoeff=0.5144;MQ=47.47;MQ0=1;MQRankSum=-5.629;QD=17.96;ReadPosRankSum=-2.996;VQSLOD=0.5720;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:41.96:0,42,556	1/1:0,4:4:5.98:101,6,0	./.	0/0:4,0:2:5.75:0,6,66	1/1:1,12:12:15.05:361,15,0	0/1:15,0:14:70.70:82,0,71	1/1:0,2:11:3.01:54,3,0	1/1:48,0:45:10.33:576,10,0	1/1:1,4:5:6.02:140,6,0	0/0:14,0:13:36.10:0,36,566	0/0:11,0:10:26.59:0,27,455	1/1:0,1:10:8.23:92,8,0	1/1:0,5:7:3.01:81,3,0	1/1:1,3:4:5.99:101,6,0	1/1:1,7:9:9.03:242,9,0	1/1:1,9:11:12.03:270,12,0	1/1:0,16:18:33.11:849,33,0	0/0:15,0:15:45.11:0,45,734	1/1:15,0:14:12.21:263,12,0	1/1:12,0:12:2.19:150,2,0	1/1:4,0:3:5.97:47,6,0	1/1:2,5:7:8.99:180,9,0	1/1:4,0:5:11.86:165,12,0	./.	1/1:0,1:9:6.02:120,6,0	1/1:0,0:10:23.55:372,24,0	1/1:1,0:16:5.78:123,6,0	0/1:8,0:7:30.22:32,0,30
chr10	38909808	.	A	ACTGT	21872.91	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-13.432;DP=563;FS=12.711;HRun=0;HaplotypeScore=83.0199;InbreedingCoeff=0.9699;MQ=73.72;MQ0=0;MQRankSum=-6.647;QD=50.17;ReadPosRankSum=4.028;VQSLOD=5.3712;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:90.78:0,91,1648	1/1:1,15:17:36.12:877,36,0	0/0:19,0:19:46.40:0,46,775	0/0:16,0:16:39.13:0,39,631	1/1:4,24:28:42.14:1106,42,0	1/1:3,15:18:39.13:961,39,0	1/1:1,8:9:9.03:237,9,0	1/1:7,20:28:60.12:1315,60,0	1/1:0,11:11:30.10:791,30,0	0/0:22,0:22:66.22:0,66,1178	0/0:17,0:17:39.12:0,39,687	1/1:1,21:22:45.15:1187,45,0	1/1:1,19:20:44.79:1180,45,0	1/1:2,16:18:39.13:1028,39,0	1/1:1,19:20:33.11:870,33,0	1/1:4,20:25:51.18:1340,51,0	1/1:6,17:24:33.11:870,33,0	0/0:18,0:18:48.16:0,48,869	1/1:3,16:21:54.14:1216,54,0	1/1:2,24:26:60.21:1584,60,0	1/1:3,21:28:54.19:1425,54,0	1/1:4,8:12:9.03:238,9,0	1/1:3,21:24:33.11:870,33,0	1/1:0,8:10:12.04:317,12,0	1/1:2,20:22:42.14:1106,42,0	1/1:0,25:24:72.20:1819,72,0	1/1:1,14:16:36.12:947,36,0	1/1:2,9:11:24.08:591,24,0
chr10	38910420	.	C	CT	694.20	PASS	AB=0.829;AC=14;AF=0.250;AN=56;BaseQRankSum=1.533;DP=545;FS=2.011;HRun=14;HaplotypeScore=95.9189;InbreedingCoeff=0.0074;MQ=75.49;MQ0=0;MQRankSum=-1.555;QD=3.40;ReadPosRankSum=-4.415;VQSLOD=-0.0731;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:33:53.80:0,54,335	0/1:4,1:6:12.47:12,0,50	0/0:13,0:12:8.69:0,9,57	0/1:19,1:17:14.21:18,0,14	0/0:21,2:25:18.83:0,19,244	0/1:9,17:27:48.33:236,0,48	0/1:8,11:19:30.74:131,0,31	0/0:32,0:32:0.95:0,1,158	0/0:11,0:13:16.72:0,17,102	0/0:23,0:23:26.32:0,26,172	0/0:13,0:14:12.81:0,13,79	1/1:1,12:13:9.59:77,10,0	0/0:16,0:17:22.51:0,23,139	0/1:21,2:23:7.31:7,0,188	0/0:18,0:20:34.42:0,34,216	0/0:19,0:19:19.67:0,20,133	0/0:32,0:36:43.52:0,44,253	0/0:20,0:21:34.31:0,34,217	0/0:20,0:20:1.32:0,1,110	0/1:12,2:14:22.55:23,0,91	0/1:9,2:11:12.80:21,0,13	0/1:16,0:16:6.41:6,0,78	1/1:9,13:23:28.34:205,28,0	0/1:7,13:20:17.56:107,0,18	0/1:12,0:12:7.84:8,0,62	0/0:17,0:17:17.45:0,17,113	0/0:28,0:28:16.24:0,16,174	0/0:8,0:8:4.65:0,5,36
chr10	38910903	.	ATCCAGTGCCT	A	6022.56	PASS	AB=0.795;AC=15;AF=0.268;AN=56;BaseQRankSum=6.018;DP=716;FS=13.015;HRun=0;HaplotypeScore=321.7900;InbreedingCoeff=-0.3679;MQ=51.27;MQ0=0;MQRankSum=-10.894;QD=18.09;ReadPosRankSum=-8.164;VQSLOD=1.2766;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:57:99:0,160,7822	0/1:9,5:14:99:365,0,459	0/0:33,0:26:72.22:0,72,2787	0/0:30,0:27:81.28:0,81,3440	0/0:14,7:21:11.98:0,12,237	0/0:23,0:23:66.23:0,66,3362	0/0:40,0:40:99:0,117,5753	0/1:21,10:31:99:952,0,1081	0/1:16,8:24:99:548,0,656	0/0:33,0:33:96.33:0,96,5015	0/0:25,0:25:75.26:0,75,3973	0/0:24,0:24:72.25:0,72,3756	0/0:10,3:13:27.09:0,27,615	0/1:19,5:24:99:309,0,686	0/1:24,5:29:99:409,0,1235	0/1:21,5:26:99:371,0,1225	0/1:12,4:16:59.31:59,0,385	0/0:19,0:19:51.17:0,51,2490	0/1:13,7:20:99:593,0,973	0/1:15,6:21:99:365,0,400	0/1:14,4:18:99:129,0,223	0/1:23,9:32:99:274,0,779	0/0:28,0:28:84.25:0,84,4280	0/0:37,0:37:99:0,108,5436	0/1:10,8:18:99:500,0,292	0/1:28,8:36:99:682,0,1314	0/1:14,8:22:99:419,0,503	0/1:2,0:2:45.96:46,0,61
chr10	38910910	.	GC	G	4818.50	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=19.252;DP=688;FS=8.110;HRun=2;HaplotypeScore=218.7053;InbreedingCoeff=0.9627;MQ=52.92;MQ0=0;MQRankSum=-17.526;QD=13.85;ReadPosRankSum=-0.640;VQSLOD=3.4896;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,160,2351	1/1:8,5:13:29.25:255,29,0	0/0:29,0:24:67.06:0,67,938	0/0:29,0:27:62.02:0,62,1000	1/1:8,11:19:7.13:59,7,0	0/0:22,0:22:63.21:0,63,944	0/0:39,0:39:99:0,114,1706	1/1:24,3:28:32.53:215,33,0	1/1:14,10:24:47.64:396,48,0	0/0:33,0:33:99:0,99,1466	0/0:28,0:28:84.28:0,84,1258	0/0:25,0:25:72.24:0,72,1079	1/1:5,8:13:26.47:198,26,0	1/1:9,15:24:50.10:344,50,0	1/1:8,19:27:68.19:520,68,0	1/1:8,18:26:64.86:470,65,0	1/1:8,7:15:9.49:83,9,0	0/0:19,0:19:54.15:0,54,785	1/1:14,5:19:35.76:285,36,0	1/1:8,13:21:30.49:310,30,0	1/1:10,6:16:14.99:138,15,0	1/1:15,16:31:45.62:377,46,0	0/0:28,0:28:84.27:0,84,1235	0/0:35,0:35:99:0,105,1545	1/1:11,7:18:38.67:310,39,0	1/1:15,17:32:71.62:551,72,0	1/1:12,8:20:38.34:267,38,0	1/1:0,2:2:5.94:41,6,0
chr10	38910913	.	T	TCCAGGGGA	25526.59	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=17.537;DP=647;FS=7.714;HRun=0;HaplotypeScore=218.0842;InbreedingCoeff=0.9733;MQ=56.41;MQ0=0;MQRankSum=-18.735;QD=83.69;ReadPosRankSum=-2.233;VQSLOD=3.5030;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,159,4632	1/1:6,5:12:33.11:1106,33,0	0/0:30,0:27:75.26:0,75,2047	0/0:28,0:26:73.13:0,73,2043	1/1:9,11:20:7.69:335,8,0	0/0:21,0:21:63.22:0,63,1909	0/0:38,0:38:99:0,114,3378	1/1:18,3:21:60.21:1732,60,0	1/1:10,10:20:57.20:1942,57,0	0/0:33,0:33:99:0,99,2946	0/0:30,0:30:87.30:0,87,2626	0/0:26,0:26:78.23:0,78,2253	1/1:5,7:12:27.09:917,27,0	1/1:5,15:20:51.18:1937,51,0	1/1:5,19:24:69.24:2581,69,0	1/1:8,17:25:75.26:2593,75,0	1/1:6,7:13:20.75:754,21,0	0/0:19,0:19:54.19:0,54,1607	1/1:11,4:16:45.15:1408,45,0	1/1:8,13:21:42.14:1484,42,0	1/1:6,6:12:27.09:954,27,0	1/1:11,16:27:57.16:1967,57,0	0/0:29,0:29:87.29:0,87,2546	0/0:35,0:35:99:0,105,3013	1/1:8,7:15:39.13:1339,39,0	1/1:9,17:26:72.25:2666,72,0	1/1:11,8:19:45.15:1571,45,0	1/1:0,2:2:6.02:240,6,0
chr10	38911264	.	TTACA	T	13356.59	PASS	AB=0.544;AC=33;AF=0.589;AN=56;BaseQRankSum=14.462;DP=589;FS=1.857;HRun=0;HaplotypeScore=103.4571;InbreedingCoeff=0.9516;MQ=64.93;MQ0=1;MQRankSum=-3.410;QD=40.97;ReadPosRankSum=4.435;VQSLOD=5.3992;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:61,0:61:99:0,175,4450	1/1:0,6:6:15.01:244,15,0	0/0:16,0:14:32.60:0,33,780	0/0:25,0:23:60.20:0,60,1409	1/1:4,15:19:27.09:504,27,0	0/0:23,0:23:63.22:0,63,1669	0/0:25,0:25:72.25:0,72,1913	1/1:3,34:34:93.29:1665,93,0	1/1:1,21:22:51.17:949,51,0	0/0:25,0:25:72.24:0,72,1828	0/0:16,0:16:45.14:0,45,1138	0/0:15,0:15:45.14:0,45,1145	1/1:0,12:12:30.10:557,30,0	1/1:3,11:14:21.07:388,21,0	1/1:1,18:19:45.15:840,45,0	1/1:1,19:20:45.15:840,45,0	1/1:1,35:35:75.22:1365,75,0	0/0:15,0:15:45.11:0,45,1123	1/1:1,11:12:33.11:615,33,0	1/1:1,15:16:33.03:535,33,0	1/1:0,25:25:60.05:1119,60,0	1/1:1,16:17:27.09:504,27,0	0/0:22,0:22:66.21:0,66,1670	0/0:20,0:20:60.21:0,60,1553	1/1:0,11:11:33.11:616,33,0	0/1:5,26:31:1.83:1273,0,2	1/1:0,20:20:48.16:896,48,0	1/1:0,9:9:24.08:448,24,0
chr10	38911886	.	AC	A	2994.54	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-12.520;DP=548;FS=12.353;HRun=9;HaplotypeScore=85.0477;InbreedingCoeff=0.9352;MQ=80.63;MQ0=2;MQRankSum=-0.551;QD=19.07;ReadPosRankSum=1.347;VQSLOD=3.2093;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:35:51.81:0,52,320	0/0:1,0:5:8.52:0,9,43	0/0:47,0:34:8.87:0,9,325	0/0:34,1:19:17.04:0,17,127	0/0:6,0:19:28.47:0,28,146	0/0:5,0:22:34:0,34,170	0/0:3,0:18:17.04:0,17,87	1/1:13,15:28:35.94:317,36,0	0/0:10,0:11:18.66:0,19,130	0/0:9,0:24:42.83:0,43,231	0/0:2,0:14:31.25:0,31,158	0/0:3,0:12:14.20:0,14,72	0/0:5,0:16:11.23:0,11,58	0/0:2,0:14:17.19:0,17,95	0/0:6,0:24:25.57:0,26,130	0/0:4,0:19:31.13:0,31,160	0/0:8,0:20:14.16:0,14,84	0/0:3,0:21:34.09:0,34,173	1/1:1,17:18:51.02:465,51,0	1/1:3,15:18:42.01:384,42,0	1/1:1,17:18:42.02:384,42,0	0/0:1,0:8:11.40:0,11,58	0/0:0,0:6:5.68:0,6,29	0/0:9,0:18:17.58:0,18,112	1/1:4,12:16:27:247,27,0	1/1:2,24:26:74.07:661,74,0	1/1:0,22:22:54.03:494,54,0	1/1:0,11:11:27.01:247,27,0
chr10	38912568	.	T	TA	1113.50	PASS	AB=0.947;AC=5;AF=0.089;AN=56;BaseQRankSum=-9.039;DP=798;FS=2.030;HRun=9;HaplotypeScore=83.5709;InbreedingCoeff=0.8558;MQ=72.96;MQ0=1;MQRankSum=-3.574;QD=17.67;ReadPosRankSum=-0.884;VQSLOD=3.6025;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,129,1106	0/0:15,0:15:44.99:0,45,391	0/1:16,0:16:1.82:2,0,87	0/0:22,0:19:26.43:0,26,205	0/0:30,0:30:77.91:0,78,666	1/1:0,25:25:66.18:730,66,0	1/1:3,17:20:25.08:504,25,0	0/0:42,0:44:97.95:0,98,831	0/0:35,0:35:98.92:0,99,851	0/0:34,0:35:94.96:0,95,802	0/0:21,0:21:59.99:0,60,521	0/0:33,0:33:89.97:0,90,781	0/0:19,0:20:59.01:0,59,496	0/0:32,0:32:89.97:0,90,781	0/0:29,0:29:77.96:0,78,673	0/0:33,0:34:91.99:0,92,780	0/0:35,0:35:95.88:0,96,821	0/0:12,0:12:35.96:0,36,307	0/0:29,0:29:71.94:0,72,619	0/0:20,0:20:50.19:0,50,424	0/0:45,0:45:99:0,123,1058	0/0:22,0:22:59.96:0,60,516	0/0:28,0:28:83.84:0,84,708	0/0:43,0:43:99:0,117,993	0/0:18,0:17:47.98:0,48,417	0/0:37,0:37:99:0,105,894	0/0:26,0:26:74.96:0,75,644	0/0:19,0:19:56.97:0,57,490
chr10	38913254	.	A	AT	10546.88	PASS	AB=0.604;AC=42;AF=0.750;AN=56;BaseQRankSum=-6.021;DP=579;FS=1.868;HRun=9;HaplotypeScore=59.9023;InbreedingCoeff=0.8227;MQ=70.77;MQ0=2;MQRankSum=-1.125;QD=23.75;ReadPosRankSum=0.579;VQSLOD=5.6946;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:92.97:0,93,807	1/1:1,10:11:6.99:292,7,0	0/0:20,0:14:23.89:0,24,201	0/0:17,0:12:7.88:0,8,94	0/1:7,16:23:1.01:431,0,1	1/1:6,12:18:13.05:372,13,0	1/1:1,17:18:42.11:465,42,0	1/1:14,25:40:30.29:757,30,0	1/1:2,24:27:50.97:533,51,0	0/0:19,0:19:47.98:0,48,416	0/0:13,0:13:32.98:0,33,286	1/1:2,19:22:56.99:611,57,0	1/1:2,16:18:45.12:496,45,0	1/1:0,17:17:45.12:497,45,0	1/1:7,28:35:32.95:811,33,0	1/1:2,16:18:42.11:465,42,0	1/1:2,16:18:45.12:498,45,0	0/0:25,0:25:62.95:0,63,540	1/1:6,14:21:47.70:490,48,0	1/1:3,15:18:22.07:469,22,0	1/1:0,10:11:29.91:313,30,0	1/1:0,6:6:15.04:166,15,0	1/1:1,14:15:36.10:398,36,0	1/1:1,18:19:39.10:429,39,0	1/1:2,25:27:63.17:697,63,0	1/1:6,23:29:69.19:763,69,0	1/1:2,17:20:41.95:446,42,0	0/1:5,8:13:8:148,0,8
chr10	38913516	.	TGG	T	7433.36	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=8.004;DP=416;FS=4.835;HRun=9;HaplotypeScore=73.7150;InbreedingCoeff=0.9800;MQ=76.02;MQ0=3;MQRankSum=-0.161;QD=27.63;ReadPosRankSum=2.406;VQSLOD=5.0114;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:33.08:0,33,512	1/1:0,14:14:30.09:350,30,0	0/0:13,0:12:26.43:0,26,327	0/0:15,0:11:6.85:0,7,106	1/1:0,20:19:45.13:524,45,0	0/0:3,0:15:24.03:0,24,229	0/0:2,0:5:14.91:0,15,128	1/1:4,22:26:69.14:762,69,0	1/1:1,8:9:18.05:210,18,0	0/0:15,0:15:42.13:0,42,667	0/0:20,0:22:50.66:0,51,791	0/0:12,0:12:30.10:0,30,492	1/1:1,9:10:27.08:313,27,0	1/1:0,15:15:33.10:384,33,0	1/1:2,12:14:36.10:419,36,0	1/1:0,12:12:30.09:349,30,0	1/1:0,26:26:66.20:769,66,0	0/0:17,0:17:48.11:0,48,733	1/1:2,15:17:45.12:514,45,0	1/1:1,11:12:27.07:313,27,0	1/1:0,9:9:18.05:210,18,0	1/1:0,8:8:21.06:245,21,0	0/0:9,0:9:27.05:0,27,389	0/0:9,0:9:24.08:0,24,390	1/1:0,16:16:39.12:454,39,0	1/1:5,25:30:30.54:813,31,0	1/1:1,21:22:45.13:524,45,0	1/1:1,8:9:24.07:280,24,0
chr10	38913917	.	TG	T	1698.71	PASS	AB=0.706;AC=22;AF=0.393;AN=56;BaseQRankSum=16.507;DP=589;FS=3.789;HRun=1;HaplotypeScore=207.5264;InbreedingCoeff=-0.5123;MQ=55.86;MQ0=0;MQRankSum=-14.065;QD=4.06;ReadPosRankSum=8.898;VQSLOD=-0.0774;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:61,0:61:99:0,184,2858	0/1:3,4:7:23.08:23,0,33	0/0:7,0:6:0.54:0,1,23	0/0:6,0:6:5.81:0,6,60	0/1:15,9:24:99:104,0,171	1/1:3,13:16:38.83:185,39,0	0/1:12,6:18:36.78:37,0,236	0/0:29,0:29:85.13:0,85,909	0/1:15,13:28:99:162,0,208	0/0:29,0:29:84.29:0,84,1342	0/0:20,0:19:57.11:0,57,855	0/1:13,9:22:80.84:114,0,81	0/1:14,18:32:99:176,0,262	0/1:11,7:18:76.12:115,0,76	0/1:14,19:33:99:189,0,145	0/1:18,13:31:99:123,0,287	0/1:12,5:17:48.75:49,0,196	0/0:19,0:19:54.16:0,54,828	0/1:20,8:28:59.41:59,0,445	0/1:5,5:9:42.75:58,0,43	0/1:21,6:27:49.51:50,0,325	0/1:7,7:14:78.02:78,0,89	0/1:7,8:15:79.13:85,0,79	0/1:17,8:25:55.09:55,0,218	0/1:2,4:6:32.72:33,0,53	0/1:11,9:20:92.79:93,0,245	0/1:14,9:22:71.25:71,0,338	0/1:3,1:4:2.23:2,0,38
chr10	38913919	.	TATATACATTG	T	11648.41	PASS	AB=0.713;AC=25;AF=0.446;AN=56;BaseQRankSum=17.446;DP=603;FS=0.000;HRun=0;HaplotypeScore=273.1192;InbreedingCoeff=-0.3972;MQ=54.92;MQ0=0;MQRankSum=-11.971;QD=27.09;ReadPosRankSum=11.273;VQSLOD=2.0027;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:64,0:64:99:0,193,8554	0/1:3,4:7:11.38:281,0,11	1/1:5,0:4:5.55:26,6,0	0/0:7,0:7:5.95:0,6,48	0/1:15,9:24:66.48:88,0,66	1/1:4,13:17:27.05:964,27,0	0/1:12,6:18:99:377,0,110	0/0:33,0:33:73.30:0,73,485	0/1:14,13:27:85.45:954,0,85	0/0:31,0:31:87.30:0,87,3827	0/0:19,0:18:54.18:0,54,2118	0/1:13,9:22:61.22:770,0,61	0/1:15,18:33:76.13:1362,0,76	0/1:10,8:18:63.99:582,0,64	0/1:16,19:35:27.51:1495,0,28	0/1:18,13:31:99:1005,0,169	0/1:14,5:19:93.96:210,0,94	0/0:19,0:19:54.18:0,54,2417	0/1:19,8:27:99:538,0,219	0/1:6,5:10:27.23:209,0,27	0/1:22,6:28:76.48:76,0,176	0/1:7,7:14:0.56:426,0,1	0/1:7,8:15:31.93:408,0,32	0/1:18,8:26:77.89:375,0,78	1/1:2,4:6:0.65:215,1,0	0/1:10,9:19:99:636,0,247	0/1:15,9:23:99:587,0,156	0/1:3,1:4:38.10:65,0,38
chr10	38914864	.	T	TG	24073.66	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-4.208;DP=571;FS=1.439;HRun=0;HaplotypeScore=77.9960;InbreedingCoeff=0.9968;MQ=79.13;MQ0=0;MQRankSum=-8.514;QD=45.08;ReadPosRankSum=5.367;VQSLOD=4.7165;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,55:55:99:2516,160,0	1/1:0,9:9:23.92:383,24,0	0/0:19,0:19:57.18:0,57,763	0/0:18,0:18:42.10:0,42,541	1/1:0,18:18:51.17:815,51,0	1/1:0,17:17:48.16:767,48,0	1/1:0,23:23:60.20:959,60,0	1/1:2,21:23:66.22:1048,66,0	1/1:0,21:21:57.19:911,57,0	1/1:0,12:12:36.12:576,36,0	1/1:0,18:18:54.18:863,54,0	1/1:0,10:10:30.10:480,30,0	1/1:0,21:21:57.19:910,57,0	1/1:0,15:15:42.14:671,42,0	1/1:1,26:27:78.27:1236,78,0	1/1:0,17:17:42.14:671,42,0	1/1:0,34:34:96.33:1535,96,0	1/1:0,26:26:78.27:1247,78,0	1/1:1,28:28:78.27:1244,78,0	1/1:0,12:12:36.12:576,36,0	1/1:1,39:39:99:1823,114,0	1/1:0,11:11:33.11:528,33,0	1/1:0,11:11:30.10:480,30,0	1/1:1,24:25:69.24:1103,69,0	1/1:0,12:12:30.10:479,30,0	1/1:0,21:21:63.21:1007,63,0	1/1:0,19:19:54.18:863,54,0	1/1:0,8:8:24.08:383,24,0
chr10	38915044	.	T	TAA	1003.54	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-1.539;DP=622;FS=0.629;HRun=1;HaplotypeScore=122.3672;InbreedingCoeff=0.9946;MQ=71.88;MQ0=1;MQRankSum=-0.411;QD=19.30;ReadPosRankSum=-0.205;VQSLOD=1.0231;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:96.28:0,96,1423	0/0:8,0:8:20.67:0,21,131	0/0:24,0:20:36.78:0,37,637	0/0:23,0:19:40.48:0,40,640	0/0:34,0:34:40.07:0,40,445	0/0:22,0:22:66.22:0,66,1004	0/0:23,0:23:66.21:0,66,983	0/0:29,0:29:32.57:0,33,187	0/0:23,0:23:31.93:0,32,330	0/0:19,0:19:54.18:0,54,790	0/0:23,0:23:69.23:0,69,1041	1/1:2,14:16:21.07:321,21,0	0/0:18,0:18:48.16:0,48,730	0/0:17,0:17:51.17:0,51,778	0/0:27,0:27:28.65:0,29,303	0/0:25,0:25:62.42:0,62,385	0/0:33,0:35:53.81:0,54,587	0/0:14,0:14:39.13:0,39,590	0/0:16,0:17:39.37:0,39,146	0/0:22,0:22:42.38:0,42,159	0/0:15,0:15:27.45:0,27,103	0/0:21,0:21:25.40:0,25,290	1/1:4,15:22:35.92:459,36,0	1/1:0,14:14:24.08:366,24,0	0/0:22,0:22:39.65:0,40,147	0/0:27,0:27:36.15:0,36,227	0/0:33,0:32:73.28:0,73,271	0/0:15,0:16:35.32:0,35,133
chr10	38915045	.	AG	A	7193.49	PASS	AB=0.989;AC=29;AF=0.518;AN=56;BaseQRankSum=2.053;DP=623;FS=1.005;HRun=1;HaplotypeScore=87.6651;InbreedingCoeff=0.5059;MQ=71.96;MQ0=1;MQRankSum=-2.249;QD=17.81;ReadPosRankSum=-2.763;VQSLOD=4.2708;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:96.30:0,96,1318	0/1:9,0:9:11.35:11,0,18	0/0:26,0:22:20:0,20,532	0/0:23,0:19:43.88:0,44,501	0/1:33,3:35:57.15:130,0,57	0/0:23,0:23:69.20:0,69,928	0/0:23,0:23:69.16:0,69,876	1/1:2,27:29:74.97:1023,75,0	0/1:24,0:24:15.22:15,0,50	0/0:18,0:18:54.11:0,54,698	0/0:23,0:23:69:0,69,864	1/1:14,0:14:20.90:105,21,0	0/0:18,0:18:47.87:0,48,634	0/0:17,0:17:51.16:0,51,687	0/1:27,0:27:23.90:156,0,24	0/1:26,0:26:43.08:56,0,43	0/1:36,0:36:99:105,0,133	0/0:16,0:16:45.08:0,45,572	1/1:1,16:17:48.11:632,48,0	1/1:0,21:21:54.15:729,54,0	1/1:0,14:14:33.11:459,33,0	0/1:21,0:21:35.69:65,0,36	1/1:20,0:20:37.34:207,37,0	1/1:13,0:13:22.90:119,23,0	1/1:0,22:22:48.16:668,48,0	1/1:1,26:27:33.46:908,33,0	1/1:0,32:32:90.30:1244,90,0	1/1:1,15:16:42.10:561,42,0
chr10	38915579	.	TA	T	1405.92	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=-1.701;DP=318;FS=3.155;HRun=9;HaplotypeScore=56.3009;InbreedingCoeff=0.7525;MQ=50.57;MQ0=8;MQRankSum=5.354;QD=10.81;ReadPosRankSum=0.781;VQSLOD=2.5005;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:23:28.01:28,0,28	1/1:1,3:4:6:55,6,0	0/0:5,0:3:6.49:0,6,46	0/0:5,0:1:3.01:0,3,35	1/1:1,15:16:42.02:384,42,0	0/0:11,0:11:30.07:0,30,323	0/0:9,0:8:21.05:0,21,220	0/0:32,0:28:81.17:0,81,869	1/1:3,7:10:18.01:165,18,0	1/1:11,0:11:11.07:76,11,0	0/0:4,0:4:2.47:0,2,19	0/0:4,0:4:11.99:0,12,124	0/0:11,0:11:12.88:0,13,115	0/0:10,0:10:21.05:0,21,229	1/1:8,9:17:24:219,24,0	1/1:1,8:9:15.01:137,15,0	1/1:4,17:21:45.02:411,45,0	1/1:16,0:16:23.95:100,24,0	0/0:16,0:15:41.80:0,42,413	0/0:8,0:9:20.89:0,21,208	0/0:14,0:14:33.09:0,33,361	1/1:1,2:3:2.99:27,3,0	0/0:4,0:4:6.02:0,6,69	0/0:10,1:11:5.64:0,6,317	0/0:11,0:11:33.09:0,33,371	0/0:9,0:8:16.53:0,17,220	0/0:11,0:11:20.22:0,20,183	0/0:10,0:10:12:0,12,143
chr10	38915589	.	T	TG	5446.38	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-7.310;DP=308;FS=1.699;HRun=2;HaplotypeScore=45.6933;InbreedingCoeff=0.8829;MQ=47.37;MQ0=16;MQRankSum=-3.229;QD=29.13;ReadPosRankSum=0.978;VQSLOD=4.4045;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:20:53.22:342,53,0	0/0:3,0:3:6.02:0,6,69	0/0:9,0:3:6.02:0,6,73	0/0:10,0:2:6:0,6,58	0/0:16,0:16:42.11:0,42,483	1/1:2,13:14:27.09:388,27,0	1/1:2,8:7:21.07:302,21,0	1/1:4,26:29:81.23:1136,81,0	0/0:7,0:7:18.05:0,18,202	1/1:9,1:10:25.58:240,26,0	1/1:7,0:5:9.20:44,9,0	0/0:5,0:5:9.03:0,9,112	1/1:2,5:8:17.81:183,18,0	1/1:1,7:8:24.04:322,24,0	0/0:10,0:10:24.07:0,24,279	0/0:9,0:9:15.04:0,15,168	0/0:20,0:19:45.12:0,45,500	1/1:14,0:14:38.34:282,38,0	1/1:2,15:16:48.14:647,48,0	1/1:2,7:9:24.04:321,24,0	1/1:1,12:13:30.10:432,30,0	0/0:4,0:3:3.01:0,3,36	0/0:2,0:2:3.01:0,3,37	0/0:14,0:13:33.05:0,33,406	0/0:12,0:12:27.08:0,27,335	1/1:2,7:9:27.02:345,27,0	1/1:1,7:8:21.04:272,21,0	1/1:3,5:8:15.01:193,15,0
chr10	38915740	.	T	TTA	2510.78	PASS	AC=14;AF=0.269;AN=52;BaseQRankSum=-9.556;DP=312;FS=0.612;HRun=0;HaplotypeScore=40.9061;InbreedingCoeff=0.7631;MQ=37.73;MQ0=54;MQRankSum=-2.009;QD=23.91;ReadPosRankSum=-1.251;VQSLOD=3.5599;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:17:23.25:0,23,278	0/0:1,0:1:3.01:0,3,39	./.	./.	0/0:18,0:18:29.92:0,30,366	0/0:22,0:22:63.08:0,63,754	0/0:7,0:4:9.03:0,9,116	1/1:14,19:28:60.19:986,60,0	0/0:8,0:7:12:0,12,131	0/0:13,0:13:27.09:0,27,346	0/0:11,0:11:24.08:0,24,308	0/0:5,0:4:6.02:0,6,77	0/0:5,0:5:12.04:0,12,154	0/0:6,0:6:9.03:0,9,116	0/0:4,0:3:3.01:0,3,38	0/0:8,0:6:6.02:0,6,73	0/0:22,0:14:36:0,36,409	0/0:19,0:13:33.11:0,33,425	1/1:7,10:12:30.10:506,30,0	1/1:2,4:4:6.02:101,6,0	1/1:2,2:2:6.02:101,6,0	0/0:5,0:5:6.01:0,6,63	0/0:8,0:6:12.04:0,12,154	0/0:6,0:5:9.03:0,9,116	0/0:16,0:14:36.12:0,36,457	1/1:4,11:14:27.09:448,27,0	1/1:9,2:7:2.90:51,3,0	1/1:8,10:11:30.10:491,30,0
chr10	38915769	.	TA	T	85.52	PASS	AC=4;AF=0.074;AN=54;BaseQRankSum=2.365;DP=329;FS=5.388;HRun=9;HaplotypeScore=40.5406;InbreedingCoeff=0.7339;MQ=57.31;MQ0=12;MQRankSum=0.483;QD=9.50;ReadPosRankSum=-0.133;VQSLOD=1.0598;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:23:60.13:0,60,672	0/0:6,0:6:15.02:0,15,160	0/0:6,0:6:14.96:0,15,140	0/0:3,0:1:3.01:0,3,35	0/0:23,0:23:54.01:0,54,613	0/0:30,0:30:78.23:0,78,899	0/0:6,0:6:15.04:0,15,173	0/0:31,0:28:69.13:0,69,752	0/0:7,0:7:21.05:0,21,232	0/0:11,0:11:33.09:0,33,374	0/0:13,0:13:33.10:0,33,381	1/1:0,7:7:15.01:137,15,0	0/0:9,0:9:24.07:0,24,276	0/0:4,0:4:12.02:0,12,128	0/0:2,0:2:6.02:0,6,69	0/0:4,0:4:9.01:0,9,94	0/0:18,1:17:17.67:0,18,455	0/0:17,0:15:39.09:0,39,429	0/0:24,0:21:60.16:0,60,677	0/0:10,0:10:27.07:0,27,301	0/0:7,0:7:18.05:0,18,208	0/0:5,0:5:15.04:0,15,173	./.	1/1:0,2:2:6:55,6,0	0/0:12,0:12:30.09:0,30,346	0/0:13,0:13:36.10:0,36,408	0/0:7,0:6:15:0,15,158	0/0:24,1:23:41.73:0,42,725
chr10	38916424	.	G	GA	4169.56	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=-10.996;DP=447;FS=9.208;HRun=7;HaplotypeScore=43.2969;InbreedingCoeff=0.8507;MQ=62.62;MQ0=5;MQRankSum=0.056;QD=25.12;ReadPosRankSum=-3.738;VQSLOD=2.0107;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:75.11:0,75,723	0/0:5,0:5:12.01:0,12,116	0/0:7,0:3:0.34:0,0,46	0/1:15,0:9:9.92:10,0,65	0/0:17,0:16:41.08:0,41,378	0/0:20,0:19:57.09:0,57,550	0/0:9,0:9:24.04:0,24,232	1/1:10,33:42:99:1168,99,0	0/0:16,0:16:44.93:0,45,429	0/0:20,0:20:42.06:0,42,406	0/0:9,0:9:21.03:0,21,203	0/0:8,0:8:18.03:0,18,174	0/0:9,0:9:21.03:0,21,203	0/0:14,0:14:42.04:0,42,395	0/0:18,0:18:54.09:0,54,522	0/0:16,0:16:48.08:0,48,464	0/0:32,0:32:90.12:0,90,862	0/0:18,0:17:45:0,45,422	1/1:7,20:27:51.16:615,51,0	1/1:3,19:22:48.15:574,48,0	1/1:1,9:10:27.08:326,27,0	0/0:6,0:6:18.03:0,18,173	0/0:6,0:6:8.91:0,9,87	0/0:8,0:8:24.04:0,24,231	0/0:17,0:16:45.07:0,45,434	1/1:1,23:24:38.42:722,38,0	1/1:3,18:21:51.15:608,51,0	1/1:0,4:4:12.04:145,12,0
chr10	38917253	.	G	GT	3732.19	PASS	AB=0.862;AC=19;AF=0.339;AN=56;BaseQRankSum=-8.220;DP=692;FS=0.000;HRun=11;HaplotypeScore=75.7713;InbreedingCoeff=0.6227;MQ=72.75;MQ0=3;MQRankSum=1.065;QD=12.78;ReadPosRankSum=3.205;VQSLOD=3.7112;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,42:47:58.27:821,58,0	0/0:8,0:8:17.88:0,18,135	0/1:21,0:13:35.39:35,0,42	0/0:23,0:20:11.70:0,12,71	0/0:22,0:23:61.75:0,62,466	1/1:2,16:18:38.95:380,39,0	0/1:7,15:22:21.78:332,0,22	0/0:24,0:25:55.72:0,56,415	0/0:23,0:24:53.69:0,54,398	1/1:7,26:33:31.49:640,31,0	1/1:3,17:21:24.58:423,25,0	0/1:23,2:25:7.34:7,0,295	1/1:7,10:18:6.80:243,7,0	1/1:2,14:18:26.04:282,26,0	0/0:31,1:34:51.25:0,51,553	0/0:23,1:25:37.06:0,37,448	0/0:37,0:37:92.57:0,93,714	1/1:5,19:24:36.88:553,37,0	0/0:22,0:23:45.89:0,46,323	0/0:32,0:33:73.69:0,74,559	0/0:30,0:30:68.67:0,69,529	0/0:26,1:28:37.29:0,37,459	0/0:17,0:17:44.76:0,45,340	0/1:30,4:34:1.81:2,0,526	0/0:16,0:16:29.83:0,30,230	0/0:22,0:23:50.76:0,51,394	0/0:26,1:28:48.08:0,48,512	0/1:8,1:9:12.56:13,0,96
chr10	38917450	.	CAG	C	8634.31	PASS	AB=0.785;AC=31;AF=0.554;AN=56;BaseQRankSum=12.384;DP=689;FS=3.362;HRun=0;HaplotypeScore=87.7197;InbreedingCoeff=0.7848;MQ=71.20;MQ0=3;MQRankSum=-0.602;QD=20.61;ReadPosRankSum=2.629;VQSLOD=5.3252;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:14,34:51:99:1210,102,0	0/0:13,0:13:36.12:0,36,585	0/0:28,0:24:57.12:0,57,801	0/0:36,0:30:47.68:0,48,785	0/0:18,2:20:11.23:0,11,697	1/1:4,19:22:48.15:589,48,0	1/1:5,16:22:35.94:420,36,0	1/1:12,20:32:57.14:666,57,0	0/1:23,4:27:84.51:85,0,742	1/1:3,15:18:45.13:542,45,0	1/1:3,4:7:15.04:173,15,0	0/0:21,0:21:42.14:0,42,677	1/1:5,9:14:21.07:259,21,0	1/1:6,20:26:48.15:591,48,0	0/0:35,0:35:72.25:0,72,1163	0/0:27,1:28:29.29:0,29,988	0/0:31,2:33:16.43:0,16,1289	1/1:8,21:29:51.16:628,51,0	1/1:6,12:18:34.35:440,34,0	1/1:1,15:16:42.13:517,42,0	1/1:10,30:39:72.23:886,72,0	0/0:16,1:17:8.27:0,8,646	0/0:22,0:22:42.14:0,42,673	0/1:29,2:31:4.64:5,0,959	0/0:17,0:17:45.15:0,45,732	1/1:5,24:29:69.19:835,69,0	1/1:9,20:29:57.01:679,57,0	0/1:1,4:6:15.46:110,0,15
chr10	38917696	.	TGA	T	2410.03	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.366;DP=731;FS=1.001;HRun=0;HaplotypeScore=98.0674;InbreedingCoeff=0.9970;MQ=87.79;MQ0=1;MQRankSum=-2.271;QD=30.90;ReadPosRankSum=2.818;VQSLOD=5.7728;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:58:99:0,160,2690	0/0:14,0:14:39.13:0,39,675	0/0:27,0:27:64.75:0,65,989	0/0:35,0:35:89.08:0,89,1478	0/0:18,0:18:45.15:0,45,770	0/0:11,0:11:33.11:0,33,572	0/0:23,0:23:66.23:0,66,1140	0/0:40,0:40:96.30:0,96,1586	0/0:21,0:21:60.21:0,60,1039	0/0:28,0:28:75.26:0,75,1289	0/0:22,0:22:63.22:0,63,1091	1/1:3,24:27:66.22:879,66,0	0/0:20,0:20:57.20:0,57,987	0/0:28,0:28:84.29:0,84,1441	0/0:27,0:27:72.25:0,72,1235	0/0:35,0:35:99:0,102,1767	0/0:26,0:26:75.26:0,75,1299	0/0:30,0:30:78.21:0,78,1291	0/0:22,0:22:54.18:0,54,930	0/0:33,0:33:87.30:0,87,1496	0/0:33,0:33:90.31:0,90,1549	0/0:21,0:21:60.19:0,60,1011	1/1:4,23:27:63.21:835,63,0	1/1:0,24:23:63.21:839,63,0	0/0:16,0:16:42.14:0,42,724	0/0:30,0:30:87.29:0,87,1482	0/0:29,0:29:87.28:0,87,1458	0/0:6,0:6:18.06:0,18,312
chr10	38919308	.	TG	T	6609.83	PASS	AB=0.550;AC=13;AF=0.232;AN=56;BaseQRankSum=11.673;DP=673;FS=1.063;HRun=1;HaplotypeScore=64.3377;InbreedingCoeff=0.8666;MQ=56.30;MQ0=19;MQRankSum=0.336;QD=34.61;ReadPosRankSum=0.767;VQSLOD=4.6691;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:72.20:0,72,1100	0/0:13,0:13:39.13:0,39,624	0/0:13,0:3:9.03:0,9,125	0/0:29,0:9:3.66:0,4,273	0/0:18,0:18:45.15:0,45,717	0/0:25,0:25:75.13:0,75,1143	0/0:27,0:27:75.21:0,75,1152	0/1:6,27:29:11.63:1007,0,12	0/0:29,0:29:87.30:0,87,1386	0/0:24,0:23:66.22:0,66,1030	0/0:16,0:16:48.15:0,48,745	0/0:25,0:25:72.25:0,72,1150	0/0:18,0:18:51.17:0,51,815	0/0:12,0:12:30.10:0,30,478	0/0:33,0:33:99:0,99,1580	0/0:22,0:22:66.22:0,66,1050	0/0:39,0:39:99:0,114,1772	0/0:26,0:26:72.25:0,72,1150	1/1:8,15:15:45.14:612,45,0	1/1:0,25:25:69.23:965,69,0	1/1:0,48:48:99:1721,123,0	0/0:12,0:12:36.10:0,36,551	0/0:17,0:17:48.15:0,48,740	0/0:39,0:39:99:0,108,1726	0/0:19,0:19:54.18:0,54,861	1/1:2,22:23:18.19:795,18,0	1/1:0,26:26:75.25:1049,75,0	1/1:1,11:11:33.11:461,33,0
chr10	38919447	.	T	TGTGGTG	497.60	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=-1.632;DP=564;FS=2.981;HRun=0;HaplotypeScore=136.8661;InbreedingCoeff=0.6003;MQ=68.11;MQ0=19;MQRankSum=-2.902;QD=4.78;ReadPosRankSum=-3.028;VQSLOD=1.8489;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:27:5.60:0,6,83	0/0:4,0:4:5.71:0,6,115	0/0:45,0:16:30.10:0,30,514	0/1:40,0:13:1.46:1,0,296	0/0:21,0:21:39.04:0,39,645	0/0:24,0:24:12.04:0,12,170	0/0:13,0:13:27.02:0,27,359	0/0:29,0:28:52.60:0,53,622	0/0:15,0:14:33.11:0,33,586	0/0:22,0:21:57.19:0,57,813	0/0:19,0:19:12.04:0,12,168	1/1:3,16:21:11.93:303,12,0	0/0:18,0:18:12.04:0,12,170	0/0:10,0:10:5.91:0,6,58	0/0:32,0:31:66.19:0,66,1129	0/0:14,0:14:36.12:0,36,679	0/0:31,0:31:78.26:0,78,1407	0/0:15,0:17:42.14:0,42,653	0/0:15,0:14:30.07:0,30,402	0/0:16,0:16:3.01:0,3,40	0/0:24,0:23:0.27:0,0,1	0/0:19,0:19:21.07:0,21,388	1/1:8,6:14:3.01:101,3,0	1/1:8,20:29:8.77:213,9,0	0/0:8,0:8:18.06:0,18,367	0/0:20,0:18:45.12:0,45,617	0/0:10,0:10:12.51:0,13,166	0/0:5,0:4:6.02:0,6,90
chr10	38919455	.	TGGTG	T	6265.70	PASS	AB=0.521;AC=28;AF=0.500;AN=56;BaseQRankSum=3.730;DP=559;FS=2.619;HRun=0;HaplotypeScore=98.8555;InbreedingCoeff=0.7441;MQ=62.38;MQ0=23;MQRankSum=-1.882;QD=22.70;ReadPosRankSum=0.650;VQSLOD=4.4341;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:2,26:27:23.34:111,0,23	0/0:3,0:3:6.02:0,6,139	0/0:42,0:13:34.36:0,34,792	0/0:36,0:10:25.04:0,25,504	0/0:20,0:20:43.81:0,44,938	1/1:3,19:25:9.11:158,9,0	1/1:9,3:14:25.96:443,26,0	1/1:2,20:21:57.19:1028,57,0	0/0:15,0:14:26.37:0,26,682	1/1:2,23:23:65.96:1190,66,0	1/1:4,15:18:12.04:214,12,0	0/0:23,0:24:25.10:0,25,369	1/1:1,12:14:11.99:157,12,0	1/1:1,8:10:6.02:92,6,0	0/0:32,0:31:80.98:0,81,1428	0/0:17,0:17:37.68:0,38,822	0/0:31,0:31:84.08:0,84,1684	1/1:18,3:21:57.12:928,57,0	1/1:2,11:12:36.12:645,36,0	1/1:1,14:16:3:26,3,0	1/1:4,22:25:3.01:31,3,0	0/0:16,0:16:36.11:0,36,630	0/0:9,0:9:8.95:0,9,142	0/0:30,0:29:15.97:0,16,295	0/0:7,0:7:21.07:0,21,555	1/1:1,21:20:54.02:900,54,0	0/1:1,10:11:14.14:233,0,14	1/1:2,6:7:6.91:111,7,0
chr10	38919458	.	TG	T	2033.57	PASS	AB=0.982;AC=27;AF=0.482;AN=56;BaseQRankSum=8.240;DP=571;FS=0.000;HRun=2;HaplotypeScore=102.1794;InbreedingCoeff=0.6963;MQ=61.00;MQ0=27;MQRankSum=-1.290;QD=7.04;ReadPosRankSum=1.392;VQSLOD=0.7539;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:28:19.17:19,0,24	0/0:4,0:4:8.52:0,9,90	0/0:41,0:12:33.09:0,33,422	0/0:36,0:10:24.69:0,25,265	0/0:20,0:20:45.28:0,45,452	1/1:22,3:25:10.38:88,10,0	1/1:13,4:16:32.07:289,32,0	1/1:24,0:22:31.01:297,31,0	0/0:16,0:15:32.08:0,32,379	1/1:26,0:24:64.59:434,65,0	1/1:17,1:17:9.77:45,10,0	0/0:22,0:22:23.45:0,23,209	1/1:13,1:14:11.69:85,12,0	1/1:8,1:9:5.85:45,6,0	0/0:33,0:32:62.90:0,63,512	0/0:19,0:19:37.92:0,38,407	0/0:32,0:32:80.35:0,80,833	1/1:21,2:22:23.80:334,24,0	1/1:15,0:13:31.53:175,32,0	0/1:17,1:18:25.24:25,0,26	1/1:26,0:26:1.25:4,1,0	0/0:15,0:14:22.52:0,23,212	0/0:8,0:8:8.91:0,9,65	0/0:28,0:27:18.73:0,19,205	0/0:7,0:7:21.07:0,21,300	1/1:23,0:21:41.98:327,42,0	0/1:12,0:11:18.22:42,0,18	1/1:10,0:9:6.32:34,6,0
chr10	38919459	.	GGT	G	851.41	PASS	AB=0.941;AC=17;AF=0.327;AN=52;BaseQRankSum=-1.256;DP=581;FS=6.219;HRun=0;HaplotypeScore=107.8237;InbreedingCoeff=0.4209;MQ=59.65;MQ0=27;MQRankSum=1.444;QD=3.92;ReadPosRankSum=2.124;VQSLOD=2.2074;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:11.21:0,11,96	1/1:4,0:4:2.84:32,3,0	./.	./.	1/1:15,1:20:17.38:121,17,0	0/0:25,0:26:5.08:0,5,17	0/0:16,0:16:5.59:0,6,53	0/0:28,0:23:5.99:0,6,59	1/1:10,3:15:5.84:47,6,0	0/0:26,0:24:12.68:0,13,50	0/0:18,0:17:2.71:0,3,22	0/0:23,0:23:9.67:0,10,136	0/1:13,0:14:3.30:3,0,7	0/0:9,0:9:3.84:0,4,14	1/1:17,14:31:34.99:362,35,0	0/1:11,8:19:2.73:92,0,3	1/1:23,9:33:25.63:227,26,0	0/0:24,0:23:17.41:0,17,142	0/1:15,0:13:4.78:5,0,47	0/0:18,0:18:4.25:0,4,41	0/1:27,0:27:14.93:15,0,19	1/1:10,3:12:9.02:98,9,0	0/0:8,0:8:6.02:0,6,70	0/0:30,0:29:12.97:0,13,165	0/0:7,0:7:12.01:0,12,156	0/1:24,0:22:12.56:13,0,78	0/0:12,0:11:8.89:0,9,56	0/0:11,0:10:8.82:0,9,87
chr10	38919729	.	T	TA	7785.59	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-5.667;DP=559;FS=5.545;HRun=10;HaplotypeScore=73.4969;InbreedingCoeff=0.9680;MQ=67.90;MQ0=1;MQRankSum=-3.149;QD=23.52;ReadPosRankSum=-1.478;VQSLOD=5.1446;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:4,25:29:78.09:805,78,0	0/0:6,0:6:17.96:0,18,145	0/0:14,0:12:17.57:0,18,134	0/0:21,0:18:18.41:0,18,259	0/0:24,0:23:53.93:0,54,443	1/1:3,14:17:48.12:509,48,0	1/1:11,17:28:66.16:698,66,0	1/1:10,28:38:62.51:842,63,0	0/0:16,0:16:32.64:0,33,270	1/1:9,14:24:20.47:421,20,0	1/1:5,11:16:35.97:356,36,0	0/0:8,0:8:14.97:0,15,123	1/1:2,10:12:5.20:263,5,0	1/1:5,12:17:42.09:440,42,0	0/0:22,0:23:52.94:0,53,425	0/0:23,0:24:58.96:0,59,474	0/0:30,0:30:65.90:0,66,539	1/1:5,25:30:62.49:838,62,0	1/1:8,17:26:62.94:634,63,0	1/1:6,16:22:44.95:460,45,0	1/1:5,6:11:18.48:180,18,0	0/0:16,0:16:38.94:0,39,317	0/0:17,1:18:12.96:0,13,312	0/0:10,0:10:26.64:0,27,221	0/0:16,0:16:32.91:0,33,266	1/1:7,16:22:51.12:537,51,0	1/1:9,20:29:25.91:682,26,0	1/1:5,3:8:12.02:119,12,0
chr10	38919799	.	T	TG	22641.63	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-7.642;DP=637;FS=0.000;HRun=1;HaplotypeScore=66.4020;InbreedingCoeff=0.9955;MQ=83.66;MQ0=0;MQRankSum=-9.071;QD=39.10;ReadPosRankSum=3.413;VQSLOD=5.4598;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,33:35:99:1480,99,0	1/1:0,6:6:18.06:269,18,0	0/0:22,0:22:61.72:0,62,750	0/0:20,0:20:50.28:0,50,630	1/1:1,19:20:50.95:682,51,0	1/1:2,27:29:72.24:1065,72,0	1/1:2,30:32:87.29:1302,87,0	1/1:1,51:52:99:2069,153,0	1/1:0,19:19:45.10:647,45,0	1/1:0,11:11:33.11:494,33,0	1/1:1,19:20:55.32:781,55,0	1/1:0,16:16:45.15:672,45,0	1/1:1,13:14:36.10:532,36,0	1/1:2,13:15:42.12:574,42,0	1/1:0,22:22:56.86:825,57,0	1/1:0,32:32:90.30:1346,90,0	1/1:2,37:39:90.26:1314,90,0	1/1:2,18:20:54.18:808,54,0	1/1:2,19:21:60.18:850,60,0	1/1:1,23:24:69.23:1022,69,0	1/1:0,39:39:99:1521,102,0	1/1:0,18:18:45.10:648,45,0	1/1:1,17:18:42.14:629,42,0	1/1:1,24:25:66.21:987,66,0	0/0:16,0:16:48.16:0,48,622	1/1:2,19:21:60.16:873,60,0	1/1:1,22:23:63.21:938,63,0	1/1:1,7:8:21.07:312,21,0
chr10	38919950	.	CT	C	813.46	PASS	AB=0.690;AC=16;AF=0.286;AN=56;BaseQRankSum=-0.965;DP=574;FS=0.937;HRun=16;HaplotypeScore=88.9221;InbreedingCoeff=0.4711;MQ=66.00;MQ0=20;MQRankSum=2.527;QD=3.70;ReadPosRankSum=1.955;VQSLOD=0.8521;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:31:26.15:0,26,266	0/0:12,0:11:29.97:0,30,250	0/0:19,0:15:8.77:0,9,59	0/0:6,0:6:2.99:0,3,23	0/0:24,2:28:12.08:0,12,284	0/0:12,0:26:42.47:0,42,259	0/0:18,0:23:47.92:0,48,303	0/1:13,15:30:2.33:196,0,2	0/0:20,1:20:13.11:0,13,200	0/0:22,0:25:37.73:0,38,224	0/0:15,0:23:38.16:0,38,229	1/1:5,0:14:19.82:57,20,0	0/0:8,0:13:13.55:0,14,93	0/0:7,1:14:8.38:0,8,125	0/0:18,2:21:14.92:0,15,198	0/1:25,3:30:27.36:27,0,227	0/0:21,2:25:1.08:0,1,215	0/0:14,0:13:16.27:0,16,86	0/1:10,3:13:3.22:33,0,3	0/1:5,13:19:25.76:83,0,26	0/1:7,9:16:7.42:78,0,7	0/0:19,0:20:31.51:0,32,227	1/1:4,2:15:19.74:77,20,0	1/1:9,0:17:16.15:47,16,0	0/0:22,2:25:14.35:0,14,251	1/1:6,11:16:30.45:172,30,0	0/1:8,15:24:34.98:118,0,35	1/1:5,7:12:17.46:108,17,0
chr10	38920274	.	C	CAA	11240.30	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-13.792;DP=696;FS=3.997;HRun=11;HaplotypeScore=103.3952;InbreedingCoeff=0.9541;MQ=75.10;MQ0=2;MQRankSum=-0.435;QD=24.44;ReadPosRankSum=-3.228;VQSLOD=3.9480;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,29:37:71.68:968,72,0	0/0:1,0:15:33.17:0,33,160	0/0:12,0:13:23.26:0,23,164	0/0:12,0:12:7.62:0,8,44	0/0:4,0:37:87.72:0,88,379	1/1:0,17:16:33.11:478,33,0	1/1:2,14:16:36.12:521,36,0	1/1:12,34:51:99:1548,120,0	0/0:1,0:20:41.15:0,41,178	1/1:6,12:21:42.14:593,42,0	1/1:4,22:28:62.19:767,62,0	1/1:5,0:24:1.36:65,1,0	1/1:4,21:25:31.35:437,31,0	1/1:4,14:19:24.03:309,24,0	0/0:1,0:25:60.38:0,60,260	0/0:4,0:28:60.33:0,60,261	0/0:3,0:25:49.64:0,50,231	1/1:4,18:23:54.11:722,54,0	1/1:2,13:18:44.12:580,44,0	1/1:4,27:35:80.75:1113,81,0	1/1:2,8:11:18.94:253,19,0	0/0:6,0:29:57.95:0,58,269	1/1:5,1:33:56.71:258,57,0	1/1:4,0:22:37.43:129,37,0	0/0:31,0:32:65.94:0,66,690	1/1:2,26:31:83.18:1051,83,0	1/1:2,27:32:68.16:904,68,0	1/1:0,11:15:41.62:544,42,0
chr10	38922416	.	C	CGTTTT	12570.19	PASS	AB=1.000;AC=31;AF=0.554;AN=56;BaseQRankSum=9.576;DP=666;FS=0.773;HRun=0;HaplotypeScore=134.1746;InbreedingCoeff=0.9093;MQ=60.53;MQ0=4;MQRankSum=-14.911;QD=36.97;ReadPosRankSum=-3.302;VQSLOD=4.1215;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:20,18:41:63.21:1739,63,0	0/0:9,0:9:24.08:0,24,454	0/1:20,0:16:20.20:20,0,366	0/0:33,0:23:40.23:0,40,642	0/0:27,0:27:72.19:0,72,1261	1/1:2,13:15:36.12:1036,36,0	1/1:15,12:27:33.11:923,33,0	1/1:26,3:29:21.05:492,21,0	0/0:24,0:24:54.17:0,54,980	1/1:14,9:22:30.09:837,30,0	1/1:8,8:17:27.09:697,27,0	0/0:24,0:24:45.15:0,45,851	1/1:10,14:24:33.11:947,33,0	1/1:6,9:16:27.09:776,27,0	0/0:41,0:41:78.27:0,78,1458	0/0:32,0:32:69.24:0,69,1280	0/0:36,0:36:81.28:0,81,1525	1/1:8,9:18:30.10:864,30,0	1/1:14,6:21:27.03:562,27,0	1/1:9,16:25:51.17:1412,51,0	1/1:9,4:14:15.05:369,15,0	0/0:31,0:31:63.20:0,63,1159	0/0:14,0:14:39.13:0,39,737	0/0:37,0:37:96.31:0,96,1766	0/0:18,0:18:48.13:0,48,844	1/1:15,11:28:45.15:1206,45,0	1/1:5,7:14:18.06:517,18,0	1/1:3,2:5:6.02:173,6,0
chr10	38922719	.	TACACACACACACACACAC	T	4594.20	PASS	AB=0.724;AC=22;AF=0.440;AN=50;BaseQRankSum=0.865;DP=318;FS=1.614;HRun=0;HaplotypeScore=145.9975;InbreedingCoeff=0.5536;MQ=61.57;MQ0=8;MQRankSum=-4.470;QD=42.54;ReadPosRankSum=-0.116;VQSLOD=4.1812;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	0/0:2,0:5:12.04:0,12,480	0/0:21,0:13:6.02:0,6,195	0/0:17,0:10:9.03:0,9,429	0/0:11,0:11:6.02:0,6,292	0/1:7,4:10:99:141,0,189	1/1:7,2:8:3.01:147,3,0	1/1:13,5:17:15.04:211,15,0	0/0:1,0:8:18.06:0,18,701	1/1:0,0:1:3.01:126,3,0	1/1:0,2:2:3.01:147,3,0	0/0:5,0:8:6.02:0,6,194	1/1:5,2:8:5.21:271,5,0	1/1:3,6:9:9.03:440,9,0	0/0:6,0:18:30.57:0,31,1151	0/0:6,0:20:46.40:0,46,1753	0/0:20,0:30:45.01:0,45,1215	1/1:6,4:10:6.02:294,6,0	./.	1/1:4,2:6:3.01:147,3,0	./.	0/0:7,0:7:3.01:0,3,48	0/0:3,0:4:6.02:0,6,278	0/0:15,0:29:42.10:0,42,2010	0/0:9,0:8:15.52:0,16,858	0/1:6,4:10:99:321,0,148	1/1:4,15:19:42.14:2056,42,0	1/1:1,4:4:6.02:294,6,0
chr10	38922998	.	C	CTTTTTTTTT	14318.69	PASS	AB=1.000;AC=52;AF=0.929;AN=56;BaseQRankSum=0.826;DP=410;FS=0.000;HRun=15;HaplotypeScore=143.9947;InbreedingCoeff=0.4163;MQ=48.05;MQ0=2;MQRankSum=-4.189;QD=35.89;ReadPosRankSum=-2.411;VQSLOD=1.8454;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:24:61.02:1360,61,0	1/1:4,0:4:3.01:58,3,0	0/1:10,0:6:10.52:11,0,31	0/1:10,0:7:10.08:10,0,30	1/1:18,0:18:38.72:938,39,0	1/1:20,0:20:45.13:1043,45,0	1/1:15,0:14:21.53:369,22,0	1/1:32,0:31:42.59:547,43,0	1/1:16,0:14:27.09:593,27,0	1/1:13,0:13:30.10:725,30,0	1/1:14,0:13:18.06:427,18,0	1/1:13,0:11:24.08:455,24,0	1/1:11,0:10:23.63:483,24,0	1/1:15,0:13:31.34:942,31,0	1/1:19,0:16:21.03:587,21,0	1/1:28,0:27:59.57:1369,60,0	1/1:9,8:17:24.85:768,25,0	1/1:13,0:12:27.09:792,27,0	1/1:15,0:12:14.41:230,14,0	1/1:8,0:8:18.06:311,18,0	1/1:13,0:13:17.67:278,18,0	1/1:6,0:5:9.03:239,9,0	1/1:12,0:12:26.30:565,26,0	1/1:8,0:16:6.49:144,6,0	0/0:9,0:11:17.72:0,18,394	1/1:12,0:14:30.10:557,30,0	1/1:12,0:11:18.01:312,18,0	1/1:6,0:6:16.55:205,17,0
chr10	38923013	.	TGG	T	2732.09	PASS	AB=0.892;AC=21;AF=0.375;AN=56;BaseQRankSum=1.575;DP=407;FS=125.252;HRun=2;HaplotypeScore=74.3194;InbreedingCoeff=-0.6551;MQ=55.54;MQ0=2;MQRankSum=-3.657;QD=8.67;ReadPosRankSum=2.035;VQSLOD=-0.4604;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:25,4:28:99:353,0,425	0/1:3,2:5:25.50:26,0,126	0/1:14,1:10:15.83:16,0,178	0/0:11,1:8:2.26:0,2,166	0/1:12,7:19:99:207,0,352	0/1:12,6:18:99:370,0,181	0/1:10,0:10:99:101,0,179	0/1:20,2:21:99:221,0,212	0/1:14,0:12:99:183,0,228	0/1:12,1:13:99:148,0,264	0/1:11,3:14:99:153,0,241	0/1:11,1:10:99:100,0,161	0/1:13,2:14:99:131,0,247	0/0:14,1:14:2.99:0,3,486	0/1:14,2:13:63.65:64,0,337	0/1:21,4:25:99:404,0,338	0/0:11,0:11:18.01:0,18,255	0/1:10,1:11:65.37:65,0,296	0/1:13,0:10:30.85:31,0,280	0/1:10,0:10:41.59:42,0,242	0/1:13,0:13:49.33:49,0,360	0/1:12,0:11:56.93:57,0,366	0/1:9,1:10:70.89:71,0,262	0/0:12,2:14:17.73:0,18,219	0/0:13,0:13:36.12:0,36,551	0/1:11,1:14:95.31:95,0,263	0/0:16,0:15:0.98:0,1,481	0/0:9,0:9:19.35:0,19,250
chr10	38923018	.	CT	C	2689.50	PASS	AB=0.571;AC=29;AF=0.518;AN=56;BaseQRankSum=1.229;DP=417;FS=4.959;HRun=8;HaplotypeScore=71.8774;InbreedingCoeff=0.8990;MQ=61.36;MQ0=2;MQRankSum=1.335;QD=11.54;ReadPosRankSum=0.191;VQSLOD=2.7605;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:17,15:30:20.68:249,21,0	0/0:5,0:5:9.03:0,9,109	0/0:15,0:11:17.97:0,18,194	0/0:14,0:10:15.05:0,15,178	0/0:19,0:19:32.45:0,32,367	1/1:12,7:18:10.97:161,11,0	1/1:4,10:13:16.24:170,16,0	1/1:14,6:19:8.92:182,9,0	0/0:16,0:14:24.54:0,25,291	1/1:7,7:14:21.03:203,21,0	1/1:7,9:15:20.28:202,20,0	0/0:12,0:10:13.23:0,13,131	1/1:7,10:16:19.33:200,19,0	1/1:5,9:12:26.87:260,27,0	0/0:17,0:14:15:0,15,165	0/0:30,0:29:43.89:0,44,466	0/0:8,0:8:21.06:0,21,251	1/1:6,7:12:12.75:141,13,0	0/1:3,9:9:2.71:176,0,3	1/1:4,5:9:14.89:145,15,0	1/1:3,9:12:23.87:232,24,0	0/0:12,0:11:28.85:0,29,315	0/0:9,0:9:9.46:0,9,94	0/0:15,0:14:15.93:0,16,183	0/0:12,0:12:27.07:0,27,315	1/1:8,6:14:17.71:165,18,0	1/1:3,13:15:30.05:290,30,0	1/1:5,6:11:14.99:138,15,0
chr10	38924833	.	AAG	A	830.68	PASS	AB=0.976;AC=11;AF=0.196;AN=56;BaseQRankSum=-0.212;DP=390;FS=10.908;HRun=0;HaplotypeScore=63.6930;InbreedingCoeff=0.4006;MQ=75.38;MQ0=5;MQRankSum=-0.068;QD=7.69;ReadPosRankSum=1.563;VQSLOD=2.1314;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:20,2:22:21.31:235,0,21	0/0:7,0:7:20.69:0,21,142	0/0:33,0:18:31.59:0,32,332	0/0:18,0:10:19.01:0,19,127	0/0:22,0:22:49.28:0,49,408	0/1:16,0:16:51.72:65,0,52	0/1:10,0:10:42.09:93,0,42	0/0:33,0:32:74.23:0,74,881	0/0:9,0:9:17.76:0,18,133	1/1:11,1:12:14.67:124,15,0	1/1:8,0:8:19.10:110,19,0	0/0:12,0:12:23.95:0,24,279	0/1:6,0:6:11.41:41,0,11	1/1:8,1:9:14.02:103,14,0	0/0:14,0:14:17.18:0,17,189	0/0:8,0:8:15.94:0,16,183	0/0:17,0:17:35.62:0,36,337	0/1:24,1:25:14.45:223,0,14	0/0:15,0:15:38.36:0,38,446	0/0:14,0:14:36.22:0,36,411	0/0:12,0:12:17.78:0,18,160	0/0:3,0:3:5.90:0,6,37	0/0:4,0:4:9.85:0,10,85	0/0:11,0:11:17.94:0,18,192	0/0:18,0:18:25.01:0,25,415	0/0:13,0:13:32.96:0,33,343	0/0:5,0:5:11.85:0,12,118	0/0:14,0:14:13.95:0,14,245
chr10	38924834	.	AG	A	1541.01	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-2.494;DP=373;FS=9.735;HRun=3;HaplotypeScore=54.6094;InbreedingCoeff=0.9232;MQ=76.46;MQ0=5;MQRankSum=-0.645;QD=15.41;ReadPosRankSum=2.893;VQSLOD=2.2483;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:16,4:20:43.59:383,44,0	0/0:7,0:7:14.03:0,14,75	0/0:32,0:17:31.63:0,32,267	0/0:17,0:11:20.55:0,21,129	0/0:22,0:22:40.39:0,40,276	1/1:15,0:15:26.08:190,26,0	1/1:11,0:11:12.28:117,12,0	0/0:32,0:31:76.91:0,77,647	0/0:8,0:8:13.66:0,14,84	1/1:7,5:12:25.84:245,26,0	1/1:3,4:7:17.68:153,18,0	0/0:11,0:11:20.92:0,21,185	1/1:3,1:4:8.97:78,9,0	1/1:4,4:8:11.88:121,12,0	0/0:14,0:14:31.18:0,31,182	0/0:8,0:8:22.14:0,22,150	0/0:17,0:17:20.36:0,20,196	1/1:17,6:23:43.94:453,44,0	0/0:15,0:15:38.85:0,39,351	0/0:14,0:14:33.54:0,34,273	0/0:11,0:11:11.32:0,11,94	0/0:3,0:3:5.45:0,5,28	0/0:4,0:4:8.95:0,9,69	0/0:11,0:11:20.37:0,20,144	0/0:18,0:18:35.22:0,35,308	0/0:11,0:11:26.93:0,27,231	0/0:5,0:5:9.39:0,9,75	0/0:13,0:13:20.74:0,21,179
chr10	38924909	.	C	CGGA	10781.75	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=7.889;DP=229;FS=6.334;HRun=0;HaplotypeScore=106.8826;InbreedingCoeff=0.7593;MQ=84.59;MQ0=0;MQRankSum=-8.192;QD=54.73;ReadPosRankSum=2.917;VQSLOD=6.9233;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,11:16:39.54:787,40,0	1/1:0,2:2:6.02:139,6,0	0/0:11,0:11:11.18:0,11,485	0/0:10,0:10:27.02:0,27,417	1/1:1,8:9:21.07:471,21,0	1/1:0,13:14:40.02:885,40,0	1/1:6,15:21:54.19:1158,54,0	1/1:4,4:8:18.06:373,18,0	1/1:0,6:6:18.06:410,18,0	1/1:0,4:4:12.04:274,12,0	1/1:0,6:6:15.05:333,15,0	1/1:0,5:6:16.61:335,17,0	1/1:1,2:3:7.84:138,8,0	1/1:2,4:6:13.86:272,14,0	1/1:1,6:8:21:418,21,0	1/1:0,5:6:15.94:344,16,0	1/1:1,13:14:39.13:882,39,0	1/1:0,8:9:24.55:566,25,0	1/1:1,4:5:15.03:290,15,0	1/1:0,4:4:12.04:270,12,0	1/1:4,3:7:9.03:181,9,0	1/1:0,1:1:3.01:65,3,0	1/1:0,5:5:15.05:333,15,0	1/1:2,10:12:27.05:533,27,0	0/0:11,0:11:33.11:0,33,608	1/1:1,7:9:21.96:475,22,0	1/1:3,11:14:39.02:777,39,0	1/1:1,1:2:3.01:70,3,0
chr10	38924910	.	TC	T	3176.97	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=7.779;DP=231;FS=9.340;HRun=1;HaplotypeScore=130.3372;InbreedingCoeff=0.8012;MQ=87.44;MQ0=0;MQRankSum=-8.603;QD=16.13;ReadPosRankSum=2.867;VQSLOD=3.2942;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:16,1:17:41.26:280,41,0	1/1:2,0:2:5.88:36,6,0	0/0:10,0:11:29.77:0,30,442	0/0:12,0:12:30.07:0,30,440	1/1:9,0:9:23.45:148,23,0	1/1:13,1:14:41.09:264,41,0	1/1:21,0:21:58.12:345,58,0	1/1:8,0:8:23.73:173,24,0	1/1:6,0:6:17.50:99,18,0	1/1:4,0:4:11.64:67,12,0	1/1:6,0:6:14.63:94,15,0	1/1:5,1:6:17.18:89,17,0	1/1:3,0:3:8.62:45,9,0	1/1:5,0:5:14.21:75,14,0	1/1:7,1:8:23.39:153,23,0	1/1:5,1:6:17.56:102,18,0	1/1:14,0:14:37.84:217,38,0	1/1:8,1:9:26.58:175,27,0	1/1:4,0:4:11.56:63,12,0	1/1:4,0:4:11.56:62,12,0	1/1:8,0:8:17.90:139,18,0	1/1:1,0:1:2.99:24,3,0	1/1:5,0:5:14.65:93,15,0	1/1:12,0:12:23.07:128,23,0	0/0:11,0:11:33.11:0,33,527	1/1:8,1:9:26.01:159,26,0	1/1:14,0:14:41.06:262,41,0	1/1:2,0:2:5.92:40,6,0
chr10	38924911	.	C	CCGGCAGT	24888.94	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=5.283;DP=295;FS=12.732;HRun=0;HaplotypeScore=116.8242;InbreedingCoeff=0.8667;MQ=79.82;MQ0=0;MQRankSum=-8.567;QD=96.10;ReadPosRankSum=2.628;VQSLOD=6.1001;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,11:18:42.13:1516,42,0	1/1:2,2:4:12.04:405,12,0	0/0:11,0:11:28.91:0,29,721	0/0:13,0:13:30.07:0,30,655	1/1:5,8:13:30.10:1101,30,0	1/1:1,13:14:42.14:1661,42,0	1/1:13,15:28:74.95:2670,75,0	1/1:7,4:11:33.07:1107,33,0	1/1:3,6:9:27.09:1086,27,0	1/1:3,4:7:18.06:728,18,0	1/1:1,6:7:15.05:580,15,0	1/1:1,4:6:18.06:709,18,0	1/1:3,2:5:12.04:382,12,0	1/1:4,4:8:24.08:913,24,0	1/1:3,6:9:24.08:839,24,0	1/1:2,5:7:21.07:824,21,0	1/1:2,12:15:42.10:1639,42,0	1/1:7,8:15:36.12:1397,36,0	1/1:3,4:7:21.07:832,21,0	1/1:3,4:7:15.05:596,15,0	1/1:12,3:15:24.54:675,25,0	1/1:1,1:2:3.01:112,3,0	1/1:3,5:8:18.06:691,18,0	1/1:2,10:12:24.07:950,24,0	0/0:12,0:12:33.11:0,33,902	1/1:7,7:14:42.14:1565,42,0	1/1:5,11:16:48.16:1744,48,0	1/1:1,1:2:6.02:166,6,0
chr10	38927185	.	C	CTT	20499.06	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=13.122;DP=788;FS=4.290;HRun=1;HaplotypeScore=107.4279;InbreedingCoeff=1.0000;MQ=88.10;MQ0=1;MQRankSum=-4.437;QD=53.11;ReadPosRankSum=0.593;VQSLOD=4.6964;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,31:32:81.28:1637,81,0	0/0:17,0:17:48.16:0,48,780	0/0:32,0:32:83.11:0,83,1297	0/0:26,0:26:62.27:0,62,845	0/0:21,0:21:54.18:0,54,877	1/1:0,19:20:54.19:1096,54,0	1/1:3,22:25:54.19:1091,54,0	1/1:0,26:27:81.23:1493,81,0	0/0:34,0:34:99:0,99,1529	1/1:1,37:39:99:2209,114,0	1/1:0,15:15:39.13:791,39,0	0/0:40,0:40:99:0,108,1684	1/1:0,32:32:90.27:1786,90,0	1/1:1,27:28:72.25:1454,72,0	0/0:38,0:38:99:0,111,1771	0/0:39,0:39:99:0,111,1800	0/0:32,0:32:93.30:0,93,1480	1/1:1,21:22:57.20:1152,57,0	1/1:0,18:18:54.12:983,54,0	1/1:0,23:23:66.10:1254,66,0	1/1:0,31:31:84.20:1617,84,0	0/0:29,0:29:78.25:0,78,1241	0/0:22,0:22:63.10:0,63,962	0/0:45,0:45:99:0,135,2188	0/0:27,0:27:78.27:0,78,1269	1/1:1,29:31:90.28:1754,90,0	1/1:0,28:29:72.25:1452,72,0	1/1:0,12:12:36.12:731,36,0
chr10	38928206	.	GA	G	6744.41	PASS	AB=0.967;AC=32;AF=0.571;AN=56;BaseQRankSum=13.231;DP=475;FS=0.000;HRun=8;HaplotypeScore=55.0198;InbreedingCoeff=0.8516;MQ=76.77;MQ0=0;MQRankSum=-1.704;QD=22.26;ReadPosRankSum=0.649;VQSLOD=5.0881;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,26:27:72.11:695,72,0	0/0:4,0:4:12.04:0,12,145	0/1:15,0:13:10.82:11,0,86	0/1:13,1:12:24.07:24,0,99	0/0:24,0:24:72.22:0,72,862	1/1:3,16:19:42.06:406,42,0	1/1:3,13:16:36.06:348,36,0	1/1:1,26:27:75.11:719,75,0	0/0:16,0:16:48.15:0,48,580	1/1:0,23:23:69.11:666,69,0	1/1:2,19:21:54.07:516,54,0	0/0:14,0:14:36.10:0,36,424	1/1:1,16:17:45.07:434,45,0	1/1:0,10:10:30.05:290,30,0	0/0:21,0:21:57.17:0,57,689	0/0:16,0:16:45.14:0,45,542	0/0:12,0:12:33.10:0,33,399	1/1:2,9:11:21.03:203,21,0	1/1:1,19:20:57.09:550,57,0	1/1:6,26:32:72.11:695,72,0	1/1:1,5:6:15.02:145,15,0	0/0:15,0:15:36.11:0,36,431	0/0:10,0:10:27.08:0,27,326	0/0:16,0:16:45.08:0,45,514	0/0:24,0:24:63.19:0,63,758	1/1:4,17:21:51.08:492,51,0	1/1:1,16:17:39.06:377,39,0	1/1:0,7:7:18.03:174,18,0
chr10	38930115	.	T	TAAA	9994.86	PASS	AB=0.678;AC=41;AF=0.732;AN=56;BaseQRankSum=1.027;DP=605;FS=3.996;HRun=11;HaplotypeScore=108.9974;InbreedingCoeff=0.4371;MQ=74.10;MQ0=0;MQRankSum=-4.155;QD=19.83;ReadPosRankSum=-2.740;VQSLOD=3.0904;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:10,24:37:69.18:1119,69,0	1/1:2,0:8:6.23:13,6,0	0/1:16,0:16:0.61:1,0,153	0/1:11,0:13:10.36:10,0,101	0/1:3,0:15:19.26:19,0,48	1/1:2,8:11:24.08:446,24,0	1/1:4,16:23:45.12:745,45,0	1/1:17,12:30:60.13:1000,60,0	0/1:3,0:28:23.30:23,0,40	1/1:7,14:25:54.13:858,54,0	1/1:5,15:20:42.14:736,42,0	0/0:20,0:21:50.97:0,51,579	1/1:7,12:20:24.08:417,24,0	1/1:2,9:11:18.06:330,18,0	0/1:3,0:29:4.16:46,0,4	1/1:2,0:16:13.71:30,14,0	0/1:3,0:28:7.89:41,0,8	1/1:2,7:10:16.30:285,16,0	1/1:12,10:23:33.09:548,33,0	1/1:2,10:14:36.09:542,36,0	1/1:5,11:17:17.82:267,18,0	0/1:11,0:30:37.08:51,0,37	0/0:19,0:19:51.10:0,51,595	0/0:40,0:41:99:0,105,1210	0/0:19,0:20:40.57:0,41,486	1/1:15,15:35:70.87:1052,71,0	1/1:8,17:32:66.10:1033,66,0	1/1:3,6:10:21.07:381,21,0
chr10	38930611	.	C	CGGGG	10429.92	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=12.614;DP=494;FS=8.267;HRun=5;HaplotypeScore=105.5130;InbreedingCoeff=0.9498;MQ=54.15;MQ0=3;MQRankSum=-9.729;QD=36.47;ReadPosRankSum=-5.024;VQSLOD=0.8486;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:23,9:30:45.46:884,45,0	0/0:9,0:9:21.04:0,21,323	0/0:7,0:7:11.93:0,12,166	0/0:8,0:3:6.01:0,6,74	0/0:11,0:11:21.07:0,21,351	1/1:7,9:20:27.09:671,27,0	1/1:9,16:29:54.19:1300,54,0	1/1:15,6:24:36.54:717,37,0	0/0:16,0:16:36.10:0,36,602	1/1:18,1:19:22.46:400,22,0	1/1:5,1:6:6.02:149,6,0	0/0:19,0:19:54.14:0,54,821	1/1:4,11:18:35.93:890,36,0	1/1:6,13:21:42.14:1019,42,0	0/0:21,0:21:60.20:0,60,1004	0/0:24,0:24:63.21:0,63,1052	0/0:24,0:24:66.22:0,66,1104	1/1:13,5:18:21.07:527,21,0	1/1:6,8:15:36.11:835,36,0	1/1:5,7:12:12.04:308,12,0	1/1:4,9:15:9.19:233,9,0	0/0:12,0:12:30.06:0,30,472	0/0:13,0:13:30.09:0,30,502	0/0:36,0:36:99:0,105,1757	0/0:8,0:8:21.07:0,21,351	1/1:10,17:29:57.65:1302,58,0	1/1:8,8:16:33.11:808,33,0	1/1:1,5:6:15.05:387,15,0
chr10	38933610	.	CGGGGGGG	C	15431.26	PASS	AB=0.900;AC=51;AF=0.911;AN=56;BaseQRankSum=-2.480;DP=407;FS=1.491;HRun=12;HaplotypeScore=116.9633;InbreedingCoeff=0.6195;MQ=51.41;MQ0=1;MQRankSum=-2.729;QD=38.67;ReadPosRankSum=3.438;VQSLOD=3.4019;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,24:27:45.13:1011,45,0	1/1:3,3:6:12.03:272,12,0	0/0:4,0:4:5.87:0,6,127	0/1:8,0:8:25.16:25,0,201	1/1:2,14:16:15.04:326,15,0	1/1:2,17:19:33.10:745,33,0	1/1:9,24:33:51.12:1158,51,0	1/1:1,14:15:42.11:839,42,0	1/1:1,10:11:18.05:406,18,0	1/1:4,13:17:42.11:911,42,0	1/1:0,7:7:9.03:204,9,0	1/1:4,22:26:60.19:1361,60,0	1/1:1,6:7:15.03:340,15,0	1/1:3,12:15:30.09:674,30,0	1/1:2,13:15:22.77:542,23,0	1/1:0,15:15:36.12:816,36,0	1/1:3,15:18:24.06:545,24,0	1/1:2,12:14:27.07:611,27,0	1/1:5,12:17:34.87:634,35,0	1/1:0,7:7:18.02:361,18,0	1/1:4,23:27:27.08:613,27,0	1/1:3,6:9:9.02:204,9,0	1/1:1,9:10:21.06:477,21,0	1/1:4,20:24:21.07:477,21,0	0/0:4,0:4:9.03:0,9,140	1/1:2,18:20:51.15:1062,51,0	1/1:1,9:10:24.08:545,24,0	1/1:1,4:5:12.03:272,12,0
chr10	38933616	.	GGGGGGGT	G	11270.05	PASS	AB=1.000;AC=51;AF=0.911;AN=56;BaseQRankSum=-0.268;DP=355;FS=3.735;HRun=0;HaplotypeScore=118.2452;InbreedingCoeff=0.6837;MQ=56.09;MQ0=1;MQRankSum=-5.461;QD=32.95;ReadPosRankSum=5.806;VQSLOD=4.4259;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:25:36.59:745,37,0	1/1:3,1:4:12.04:215,12,0	0/0:8,0:8:17.80:0,18,285	0/1:8,0:7:19.17:19,0,234	1/1:14,0:14:15.05:242,15,0	1/1:17,0:17:33.11:552,33,0	1/1:24,0:24:51.17:861,51,0	1/1:14,0:14:36.09:558,36,0	1/1:10,0:10:18.06:318,18,0	1/1:13,1:14:39.01:649,39,0	1/1:7,0:7:9.03:157,9,0	1/1:22,1:23:60.21:1028,60,0	1/1:6,0:6:15.03:253,15,0	1/1:12,1:13:30.10:507,30,0	1/1:13,0:13:22.78:411,23,0	1/1:15,0:15:36.12:609,36,0	1/1:15,0:15:24.08:408,24,0	1/1:12,0:12:27.09:429,27,0	1/1:12,0:12:25.29:406,25,0	1/1:7,0:7:15.04:250,15,0	1/1:23,0:23:27.09:456,27,0	1/1:6,0:6:9.03:152,9,0	1/1:9,0:9:21.07:354,21,0	1/1:20,0:20:21.07:358,21,0	0/0:5,0:5:11.97:0,12,123	1/1:18,0:18:47.93:741,48,0	1/1:9,0:9:24.08:396,24,0	1/1:4,0:4:12.04:194,12,0
chr10	38935050	.	CTACAGA	C	14479.46	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=17.418;DP=547;FS=5.449;HRun=0;HaplotypeScore=132.7090;InbreedingCoeff=0.9938;MQ=75.17;MQ0=0;MQRankSum=-17.604;QD=50.45;ReadPosRankSum=-1.473;VQSLOD=4.0019;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,29:40:72.25:1630,72,0	0/0:5,0:5:15.05:0,15,510	0/0:14,0:14:42.13:0,42,1212	0/0:17,0:17:48.16:0,48,1570	0/0:22,0:22:66.23:0,66,2210	1/1:1,22:23:57.20:1310,57,0	1/1:2,12:14:33.11:760,33,0	1/1:5,23:28:69.22:1543,69,0	0/0:11,0:11:33.11:0,33,1136	1/1:2,13:16:42.14:967,42,0	1/1:1,8:9:21.07:467,21,0	0/0:19,0:19:51.18:0,51,1788	1/1:0,15:15:42.14:936,42,0	1/1:1,18:19:45.15:997,45,0	0/0:33,0:33:99:0,99,3412	0/0:25,0:25:72.25:0,72,2525	0/0:39,0:39:99:0,105,3564	1/1:7,14:21:39.13:898,39,0	1/1:4,14:18:42.13:923,42,0	1/1:3,7:10:21.02:433,21,0	1/1:8,13:21:20.66:442,21,0	0/0:9,0:9:18.06:0,18,596	0/0:12,0:12:36.12:0,36,1258	0/0:36,0:36:99:0,99,3471	0/0:18,0:18:51.18:0,51,1788	1/1:0,23:23:69.22:1545,69,0	1/1:4,20:24:54.15:1243,54,0	1/1:0,6:6:18.06:385,18,0
chr10	38935747	.	ACC	A	3471.81	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=-1.246;DP=449;FS=35.185;HRun=12;HaplotypeScore=81.6487;InbreedingCoeff=0.7989;MQ=72.28;MQ0=3;MQRankSum=-1.899;QD=10.43;ReadPosRankSum=3.903;VQSLOD=-0.1389;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:9,9:21:23.46:272,23,0	1/1:4,0:4:5.55:36,6,0	0/0:36,0:16:7.10:0,7,159	0/0:19,0:7:6.46:0,6,49	1/1:13,0:13:29.47:212,29,0	0/0:13,0:14:5.59:0,6,35	0/0:6,0:23:21.42:0,21,132	1/1:21,0:21:26.22:169,26,0	1/1:13,0:13:17.71:111,18,0	1/1:5,4:9:5.99:61,6,0	1/1:4,5:9:6:61,6,0	1/1:3,5:8:11.96:111,12,0	0/0:6,0:6:14.99:0,15,155	0/0:7,0:7:8.54:0,9,84	1/1:22,0:22:11.89:88,12,0	1/1:22,0:22:32.50:213,33,0	1/1:22,0:22:29.54:186,30,0	1/1:6,12:18:30.03:305,30,0	1/1:13,0:14:23.65:181,24,0	1/1:18,0:18:32.72:257,33,0	1/1:22,0:22:14.86:114,15,0	1/1:7,0:7:8.90:66,9,0	1/1:3,10:13:21.03:212,21,0	1/1:6,13:20:17.91:169,18,0	0/0:7,0:9:0:0,0,0	1/1:24,0:24:39.78:301,40,0	1/1:23,0:23:38.08:252,38,0	1/1:10,0:10:14.62:96,15,0
chr10	38935757	.	CCCA	C	4980.86	PASS	AB=1.000;AC=32;AF=0.571;AN=56;BaseQRankSum=-3.235;DP=438;FS=4.541;HRun=0;HaplotypeScore=76.2426;InbreedingCoeff=0.6882;MQ=67.95;MQ0=4;MQRankSum=-0.747;QD=18.05;ReadPosRankSum=4.406;VQSLOD=4.0413;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:17,0:17:10.90:11,0,129	1/1:1,3:4:5.64:93,6,0	0/0:33,0:11:13.66:0,14,256	0/0:25,0:8:14.65:0,15,118	1/1:2,14:16:35.95:436,36,0	0/0:9,0:9:16.24:0,16,137	0/0:24,0:24:42.67:0,43,430	1/1:1,15:16:41.81:501,42,0	1/1:0,11:11:18.06:284,18,0	0/0:11,0:11:27.60:0,28,216	0/0:7,0:7:9.60:0,10,56	0/1:6,0:6:8.05:8,0,30	0/1:8,0:8:5.40:5,0,121	0/0:9,0:9:8.96:0,9,73	1/1:1,20:21:12.21:233,12,0	1/1:0,19:19:33.06:502,33,0	1/1:0,22:22:30.10:475,30,0	0/0:17,0:17:28.02:0,28,121	1/1:1,12:13:33.87:344,34,0	1/1:2,15:17:38.96:465,39,0	1/1:0,21:21:15.04:201,15,0	1/1:0,10:10:9:124,9,0	0/1:14,0:14:7.46:7,0,74	0/0:18,0:18:17.17:0,17,94	0/0:9,0:9:16.20:0,16,122	1/1:4,22:26:36.82:660,37,0	1/1:1,24:25:38.83:598,39,0	1/1:10,0:10:9.16:34,9,0
chr10	38935758	.	CCA	C	2709.82	PASS	AB=1.000;AC=36;AF=0.643;AN=56;BaseQRankSum=5.928;DP=450;FS=1.733;HRun=0;HaplotypeScore=78.4796;InbreedingCoeff=0.3792;MQ=66.91;MQ0=4;MQRankSum=-1.262;QD=7.79;ReadPosRankSum=8.683;VQSLOD=2.6029;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:19,0:19:16.61:17,0,159	1/1:4,0:4:5.81:48,6,0	0/0:33,0:11:15.53:0,16,163	0/0:23,0:7:8.38:0,8,68	1/1:15,1:16:34.82:235,35,0	0/0:12,0:12:12.43:0,12,159	0/1:24,0:24:3.66:4,0,164	1/1:15,0:15:41.25:293,41,0	1/1:11,0:11:17.93:137,18,0	0/0:11,0:11:15.48:0,15,195	0/1:8,0:8:6.62:7,0,82	0/1:7,0:7:7.32:7,0,39	0/1:8,0:8:33.31:34,0,33	0/0:12,0:12:4.35:0,4,26	1/1:21,0:21:17.92:135,18,0	1/1:19,0:19:32.67:241,33,0	1/1:22,0:22:29.89:228,30,0	0/1:18,0:18:16.88:17,0,67	1/1:13,0:13:29.47:195,29,0	1/1:16,1:17:37.54:241,38,0	1/1:21,0:21:14.44:92,14,0	1/1:10,0:10:8.69:57,9,0	0/1:15,0:15:21.59:22,0,71	0/1:19,0:19:7.84:8,0,84	0/0:11,0:11:25.20:0,25,204	1/1:25,1:26:39.72:407,40,0	1/1:25,0:25:37.97:284,38,0	1/1:0,10:10:15.05:192,15,0
chr10	38935759	.	CA	C	1755.60	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=3.944;DP=447;FS=2.000;HRun=8;HaplotypeScore=76.5295;InbreedingCoeff=0.8832;MQ=67.06;MQ0=4;MQRankSum=0.657;QD=6.99;ReadPosRankSum=5.372;VQSLOD=0.4251;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:47.93:0,48,328	1/1:4,0:4:5.81:33,6,0	0/0:32,1:11:10.10:0,10,71	0/0:21,0:6:2.56:0,3,54	1/1:16,0:16:26.32:153,26,0	0/0:10,0:10:21.06:0,21,163	0/0:23,0:23:17.42:0,17,128	1/1:15,0:15:38.15:245,38,0	1/1:11,0:11:17.53:101,18,0	0/0:11,0:11:29.74:0,30,240	0/0:8,0:8:17.39:0,17,121	0/0:7,0:7:14.91:0,15,111	1/1:7,2:9:11.98:105,12,0	1/1:4,8:12:2.51:28,3,0	1/1:21,0:21:14.62:85,15,0	1/1:19,0:19:29.15:168,29,0	1/1:22,0:22:29.24:170,29,0	0/0:18,0:18:41.46:0,41,280	1/1:13,0:13:15.92:122,16,0	1/1:17,0:17:23.33:137,23,0	1/1:21,0:21:8.75:51,9,0	1/1:10,0:10:5.79:33,6,0	0/0:15,0:15:29.27:0,29,203	0/0:19,0:19:27.70:0,28,185	0/0:11,0:11:25.20:0,25,204	1/1:26,0:26:22.43:265,22,0	1/1:25,0:25:34.80:202,35,0	1/1:10,0:10:13.92:76,14,0
chr10	38935868	.	G	GC	7590	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=9.267;DP=588;FS=7.704;HRun=6;HaplotypeScore=101.6370;InbreedingCoeff=0.9945;MQ=85.57;MQ0=1;MQRankSum=-4.249;QD=24.25;ReadPosRankSum=-1.912;VQSLOD=3.2118;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,0:28:40.14:216,40,0	0/0:9,0:9:25.96:0,26,137	0/0:27,1:28:41.33:0,41,556	0/0:19,0:19:51.11:0,51,520	0/0:29,0:29:69.19:0,69,387	1/1:2,21:23:54.17:666,54,0	1/1:4,25:29:33.17:673,33,0	1/1:4,25:29:78.18:905,78,0	0/0:19,0:19:51.60:0,52,271	1/1:4,1:15:16.03:133,16,0	1/1:1,2:14:28.60:157,29,0	0/0:19,0:19:51.11:0,51,519	1/1:3,8:11:33.04:369,33,0	1/1:1,19:20:54.17:660,54,0	0/0:28,0:28:71.95:0,72,375	0/0:16,0:16:16.84:0,17,186	0/0:24,0:24:57.20:0,57,297	1/1:3,0:16:20.09:105,20,0	1/1:8,12:20:36.56:425,37,0	1/1:3,9:12:20.24:307,20,0	1/1:6,29:34:75.27:1049,75,0	0/0:28,0:28:71.60:0,72,390	0/0:20,0:20:60.14:0,60,612	0/0:25,0:25:72.12:0,72,723	0/0:11,0:11:33.08:0,33,337	1/1:3,19:22:55.06:668,55,0	1/1:1,28:29:81.25:999,81,0	1/1:1,8:9:21.07:259,21,0
chr10	38936430	.	TAA	T	5296.25	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=2.453;DP=486;FS=0.767;HRun=15;HaplotypeScore=82.6880;InbreedingCoeff=0.8651;MQ=70.83;MQ0=4;MQRankSum=0.260;QD=12.40;ReadPosRankSum=4.172;VQSLOD=4.1315;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,24:40:45.63:377,46,0	1/1:3,0:7:11.12:52,11,0	0/0:22,0:11:7.29:0,7,78	0/0:17,0:6:5.09:0,5,54	1/1:7,0:18:17.29:79,17,0	1/1:3,8:12:17.86:158,18,0	1/1:1,0:12:19.18:82,19,0	1/1:5,18:25:47.33:390,47,0	1/1:2,0:15:27.40:118,27,0	1/1:4,11:17:38.60:318,39,0	1/1:7,13:20:11.40:266,11,0	1/1:5,19:25:44.56:372,45,0	1/1:5,11:16:20.91:185,21,0	1/1:2,9:11:23.95:211,24,0	1/1:2,0:16:27.38:118,27,0	1/1:3,0:12:22:97,22,0	1/1:2,0:21:40.95:176,41,0	1/1:8,14:22:32.84:291,33,0	1/1:3,12:17:32.39:303,32,0	1/1:3,7:10:14.94:131,15,0	1/1:1,16:17:26.88:238,27,0	1/1:3,0:13:24.70:108,25,0	1/1:6,12:19:35.61:302,36,0	1/1:4,7:11:17.88:158,18,0	0/0:18,0:17:48.11:0,48,591	1/1:5,14:19:38.82:339,39,0	1/1:4,15:22:13.53:284,14,0	1/1:0,8:9:17.74:144,18,0
chr10	38936444	.	AAC	A	194	PASS	AB=0.989;AC=14;AF=0.250;AN=56;BaseQRankSum=6.110;DP=488;FS=41.982;HRun=0;HaplotypeScore=95.1147;InbreedingCoeff=-0.1630;MQ=72.81;MQ0=3;MQRankSum=-1.135;QD=0.80;ReadPosRankSum=6.662;VQSLOD=-0.6974;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:38,0:37:13.25:13,0,144	0/0:6,0:6:13:0,13,72	0/0:19,0:11:13.47:0,13,193	0/0:17,0:8:6.56:0,7,123	0/0:16,0:16:12.16:0,12,135	0/0:16,0:16:6.13:0,6,148	0/0:16,0:16:27.59:0,28,156	0/0:27,0:27:16.75:0,17,164	0/0:13,0:13:20.34:0,20,73	0/1:21,1:22:42.32:42,0,166	0/1:16,0:16:21.94:22,0,48	0/1:24,1:25:41.81:69,0,42	0/1:16,0:16:15.81:16,0,77	0/1:12,0:12:11.10:11,0,50	0/0:15,0:15:24.13:0,24,103	0/0:9,0:9:17.62:0,18,66	0/0:26,0:26:52.08:0,52,267	0/1:17,0:17:20.30:20,0,31	0/1:18,1:19:42.71:43,0,81	0/1:8,0:8:6.55:7,0,16	0/1:22,0:22:5.16:5,0,98	0/0:15,0:15:36.98:0,37,181	0/1:14,0:14:14.74:37,0,15	1/1:9,1:10:8.36:43,8,0	0/0:17,0:17:42.12:0,42,616	0/0:16,0:16:7.69:0,8,56	0/1:25,0:25:17.77:18,0,125	0/0:15,0:15:9.97:0,10,131
chr10	38937157	.	CT	C	2155.75	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=0.792;DP=651;FS=0.000;HRun=4;HaplotypeScore=96.5097;InbreedingCoeff=0.9746;MQ=76.24;MQ0=0;MQRankSum=-1.872;QD=30.36;ReadPosRankSum=2.175;VQSLOD=3.5456;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,111,1522	0/0:13,0:13:33.11:0,33,461	0/0:10,0:10:8.45:0,8,302	0/0:16,0:16:45.12:0,45,586	0/0:11,0:11:30.09:0,30,403	0/0:19,0:18:54.18:0,54,755	0/0:35,0:35:99:0,99,1366	0/0:28,0:28:78.24:0,78,1061	0/0:23,0:23:69.22:0,69,951	0/0:28,0:28:81.26:0,81,1105	0/0:7,0:7:21.07:0,21,293	1/1:3,22:25:66.20:787,66,0	0/0:29,0:29:78.26:0,78,1090	0/0:23,0:23:63.19:0,63,850	0/0:25,0:25:75.25:0,75,1050	0/0:28,0:28:84.27:0,84,1161	0/0:34,0:34:99:0,102,1373	0/0:30,0:30:84.26:0,84,1157	0/0:27,0:27:72.21:0,72,987	0/0:19,0:19:54.15:0,54,702	0/0:32,0:32:93.29:0,93,1270	0/0:19,0:19:51.16:0,51,699	1/1:0,10:10:23.93:288,24,0	1/1:0,36:36:99:1224,102,0	0/0:22,0:22:63.17:0,63,828	0/0:31,0:31:93.31:0,93,1301	0/0:20,0:20:57.19:0,57,797	0/0:14,0:14:33.11:0,33,462
chr10	38938764	.	ATGCACT	A	10540.84	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=16.861;DP=707;FS=19.835;HRun=0;HaplotypeScore=244.0570;InbreedingCoeff=0.9850;MQ=64.00;MQ0=15;MQRankSum=-7.834;QD=23.85;ReadPosRankSum=3.562;VQSLOD=3.0107;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:35,1:40:66.66:571,67,0	1/1:0,11:11:18.06:442,18,0	0/0:33,0:18:51.16:0,51,1100	0/0:40,0:18:40.71:0,41,739	1/1:0,25:25:8.26:222,8,0	1/1:12,0:17:45.44:375,45,0	1/1:16,1:24:47.30:412,47,0	0/0:28,0:27:80.80:0,81,1945	1/1:0,31:31:35.83:882,36,0	1/1:18,0:26:61.38:619,61,0	1/1:12,0:15:26.62:262,27,0	1/1:10,0:25:59.08:504,59,0	1/1:10,1:18:53.93:502,54,0	1/1:15,3:26:69.79:750,70,0	1/1:2,34:36:62.92:1517,63,0	1/1:0,26:26:48.16:1185,48,0	1/1:1,29:30:17.98:389,18,0	1/1:11,0:13:35.53:253,36,0	0/0:19,0:19:57.18:0,57,1581	0/0:19,0:19:57.20:0,57,1681	0/0:50,0:50:99:0,138,4098	1/1:21,18:39:85.28:1198,85,0	1/1:12,0:20:29.95:252,30,0	1/1:16,0:19:23.34:206,23,0	0/0:18,0:18:45.15:0,45,1181	0/0:23,0:25:16.10:0,16,1874	0/0:22,0:22:66.23:0,66,2095	0/0:11,0:11:33.10:0,33,939
chr10	38938768	.	ACT	A	1593.83	PASS	AB=0.814;AC=22;AF=0.393;AN=56;BaseQRankSum=14.764;DP=726;FS=6.766;HRun=0;HaplotypeScore=237.9000;InbreedingCoeff=0.1236;MQ=59.17;MQ0=17;MQRankSum=-12.211;QD=3.60;ReadPosRankSum=0.131;VQSLOD=2.0141;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:39,5:41:24.65:25,0,304	1/1:11,0:11:17.49:101,17,0	0/0:31,0:16:24.25:0,24,261	0/0:35,0:13:8.36:0,8,151	1/1:25,0:25:8.33:52,8,0	0/1:11,6:17:38.44:38,0,160	0/1:20,8:28:53.10:53,0,187	0/0:33,0:32:88.97:0,89,853	1/1:31,0:31:34.58:201,35,0	0/1:20,8:28:99:124,0,202	0/1:12,3:15:9.91:10,0,112	0/1:9,14:23:59.72:131,0,60	0/1:10,7:17:60.82:61,0,129	0/1:23,7:30:99:106,0,149	1/1:36,0:36:60.79:357,61,0	1/1:26,0:26:46.75:275,47,0	0/1:30,0:30:1.08:70,0,1	0/0:14,2:16:17.47:0,17,209	0/0:19,0:19:57.09:0,57,755	0/0:21,0:21:42.05:0,42,630	0/0:54,0:54:99:0,111,1639	0/1:38,0:38:87.47:87,0,302	0/1:14,7:21:27.99:28,0,102	0/1:19,4:23:62.10:62,0,78	0/0:19,0:19:38.79:0,39,416	0/0:21,2:23:23.43:0,23,674	0/0:21,0:21:54.39:0,54,825	0/0:11,0:11:21.54:0,22,373
chr10	38938770	.	T	TCA	179.70	PASS	AB=0.951;AC=7;AF=0.135;AN=52;BaseQRankSum=-2.347;DP=760;FS=0.000;HRun=0;HaplotypeScore=266.8539;InbreedingCoeff=-0.1338;MQ=56.38;MQ0=17;MQRankSum=4.274;QD=0.89;ReadPosRankSum=-4.635;VQSLOD=1.4427;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:48,0:45:29.95:30,0,33	0/0:12,0:12:15.94:0,16,66	./.	./.	0/0:26,0:26:8.03:0,8,33	0/1:19,0:19:6.47:6,0,43	0/1:28,0:28:27.91:30,0,28	0/0:33,0:32:11.80:0,12,106	0/0:35,0:35:11.21:0,11,97	0/1:30,0:30:37.14:37,0,70	0/0:15,0:15:6.52:0,7,32	0/0:26,0:26:33.72:0,34,135	0/0:18,0:18:24.28:0,24,108	0/1:31,0:31:2.75:3,0,75	0/0:36,0:36:53.49:0,53,212	0/0:27,0:27:41.03:0,41,161	0/0:31,0:31:16.13:0,16,69	0/0:16,0:16:2.06:0,2,7	0/0:20,0:20:27.06:0,27,286	0/0:21,0:23:28.70:0,29,278	0/0:54,0:56:43.09:0,43,562	0/0:40,0:40:26.54:0,27,109	0/0:21,0:21:8.91:0,9,35	0/1:24,0:24:16.76:32,0,17	0/1:11,11:23:26.48:161,0,26	0/0:22,0:24:35.09:0,35,303	0/0:21,0:22:44.44:0,44,458	0/0:9,0:11:20.89:0,21,210
chr10	38939061	.	T	TCAC	10273.58	PASS	AB=0.967;AC=25;AF=0.446;AN=56;BaseQRankSum=4.455;DP=709;FS=0.308;HRun=0;HaplotypeScore=174.9240;InbreedingCoeff=0.0391;MQ=53.08;MQ0=6;MQRankSum=-2.068;QD=19.42;ReadPosRankSum=5.714;VQSLOD=4.1098;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:87.18:0,87,1282	0/1:14,0:14:13.45:297,0,13	0/0:14,0:3:8.88:0,9,86	0/0:9,0:9:14.25:0,14,155	0/1:20,0:20:99:197,0,151	0/1:27,0:27:99:336,0,117	0/1:31,0:31:99:296,0,149	1/1:5,22:32:80.62:663,81,0	0/1:36,0:36:99:814,0,119	0/0:24,0:24:66.08:0,66,942	0/0:15,0:15:39.08:0,39,554	0/1:28,0:28:68.41:68,0,156	0/0:24,0:24:69.17:0,69,1064	0/0:21,0:21:60.02:0,60,822	0/1:48,0:48:99:947,0,203	0/1:27,0:27:99:434,0,151	0/1:21,0:21:99:320,0,115	0/0:14,0:14:38.98:0,39,566	1/1:4,34:39:99:1108,107,0	1/1:0,17:21:38.79:562,39,0	1/1:2,43:47:69.16:1395,69,0	0/1:28,0:28:99:485,0,133	0/1:26,0:25:99:126,0,292	0/1:14,0:14:19.20:19,0,125	0/0:24,0:24:72.18:0,72,1094	0/1:8,22:30:99:991,0,160	1/1:2,26:28:51.18:1087,51,0	1/1:0,8:11:6.02:129,6,0
chr10	38939182	.	T	TCACAA	39003.14	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-5.429;DP=700;FS=0.000;HRun=0;HaplotypeScore=139.2851;InbreedingCoeff=0.9997;MQ=77.49;MQ0=0;MQRankSum=-11.852;QD=87.65;ReadPosRankSum=1.101;VQSLOD=6.2599;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,23:29:75.17:2258,75,0	1/1:1,10:11:33.11:1097,33,0	0/0:26,0:26:78.27:0,78,1781	0/0:19,0:19:48.16:0,48,1087	1/1:4,28:32:90.31:2919,90,0	1/1:3,17:20:60.21:1925,60,0	1/1:3,18:22:60.21:1985,60,0	0/0:24,0:24:66.22:0,66,1454	1/1:5,25:31:87.26:2807,87,0	1/1:8,23:32:93.28:2950,93,0	1/1:4,16:22:60.21:1900,60,0	1/1:3,22:26:69.19:2207,69,0	1/1:7,18:27:63.22:2027,63,0	1/1:2,20:23:63.22:2086,63,0	1/1:3,29:32:93.32:3086,93,0	1/1:6,26:32:90.31:2992,90,0	1/1:3,19:23:63.17:1956,63,0	1/1:3,14:20:51.13:1617,51,0	0/0:18,0:18:51.13:0,51,1055	0/0:29,0:29:84.26:0,84,1867	0/0:26,0:26:72.25:0,72,1613	1/1:6,21:29:81.28:2570,81,0	1/1:3,18:23:57.19:1826,57,0	1/1:2,9:11:24.08:795,24,0	0/0:20,0:20:57.20:0,57,1306	0/0:35,0:35:99:0,105,2365	0/0:30,0:30:90.31:0,90,2082	0/0:28,0:28:84.29:0,84,1957
chr10	38939274	.	CAG	C	649.24	PASS	AB=0.952;AC=34;AF=0.773;AN=44;BaseQRankSum=2.392;DP=545;FS=50.607;HRun=0;HaplotypeScore=151.5331;InbreedingCoeff=0.1961;MQ=58.56;MQ0=6;MQRankSum=-0.227;QD=1.62;ReadPosRankSum=-0.598;VQSLOD=0.7051;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:22:0.47:1,0,0	0/0:13,0:13:5.99:0,6,49	./.	./.	1/1:17,0:17:0.89:2,1,0	0/1:13,0:14:5.02:24,0,5	./.	./.	1/1:15,2:18:11.70:92,12,0	0/1:23,0:24:8.15:8,0,14	1/1:19,0:20:2.84:14,3,0	1/1:20,1:21:8.23:64,8,0	1/1:18,0:20:5.68:28,6,0	1/1:13,0:14:2.84:14,3,0	1/1:17,4:21:9.02:95,9,0	1/1:19,1:21:15.50:105,15,0	1/1:20,3:22:19.32:168,19,0	0/1:21,1:21:33.08:33,0,114	1/1:20,0:20:2.49:9,2,0	0/1:18,0:18:0:0,0,0	./.	0/1:12,0:12:0:0,0,0	1/1:26,0:24:4.88:20,5,0	0/1:19,0:21:8.93:26,0,9	0/0:22,0:22:3:0,3,26	1/1:17,0:18:2.84:14,3,0	1/1:20,0:27:10.74:48,11,0	./.
chr10	38939789	.	CGGAAGCTGCCGTAT	C	10210.70	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=11.304;DP=385;FS=203.056;HRun=0;HaplotypeScore=141.4803;InbreedingCoeff=0.8858;MQ=89.51;MQ0=2;MQRankSum=-12.545;QD=80.40;ReadPosRankSum=6.584;VQSLOD=1.4063;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,6:6:15.05:615,15,0	1/1:0,5:4:6.02:265,6,0	0/0:37,0:37:99:0,102,4989	0/0:26,0:26:23.26:0,23,2652	1/1:0,10:9:9.92:378,10,0	1/1:0,7:6:9.03:398,9,0	1/1:0,11:11:24.08:1016,24,0	0/0:28,0:26:72.25:0,72,3763	1/1:0,13:13:27.09:1194,27,0	1/1:0,9:9:27.09:1182,27,0	1/1:2,2:4:6.02:265,6,0	1/1:0,14:12:24.08:1037,24,0	1/1:3,4:5:15.05:660,15,0	1/1:0,9:7:15.05:648,15,0	1/1:0,6:5:15.05:655,15,0	1/1:0,9:7:18.06:794,18,0	1/1:0,4:4:6.02:227,6,0	1/1:0,1:1:3.01:133,3,0	0/0:14,0:12:33.07:0,33,1348	0/0:14,0:13:39.13:0,39,1491	0/0:57,0:55:99:0,163,8625	0/0:11,0:11:33.11:0,33,1556	1/1:0,5:5:12.04:520,12,0	1/1:0,7:6:6.02:224,6,0	0/0:26,0:26:72.25:0,72,3643	0/0:19,0:13:39.13:0,39,1878	0/0:18,0:16:48.16:0,48,2885	0/0:7,0:7:21.07:0,21,1185
chr10	38939829	.	T	TAGCACC	955.57	PASS	AB=0.964;AC=9;AF=0.167;AN=54;BaseQRankSum=3.727;DP=535;FS=22.362;HRun=0;HaplotypeScore=115.4889;InbreedingCoeff=-0.0445;MQ=62.79;MQ0=157;MQRankSum=-6.739;QD=5.94;ReadPosRankSum=-1.295;VQSLOD=0.4234;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:11,0:7:28.42:28,0,231	0/0:10,0:3:5.98:0,6,97	0/0:18,0:18:48.15:0,48,971	0/0:16,0:15:42.09:0,42,933	0/1:21,0:8:3.25:3,0,39	0/0:12,0:4:9.03:0,9,230	0/0:19,1:4:11.40:0,11,159	0/0:13,0:6:18.06:0,18,426	0/0:28,0:10:23.87:0,24,478	0/1:23,0:13:38.86:39,0,481	0/1:9,1:5:99:183,0,110	0/0:20,0:9:23.77:0,24,444	0/0:14,0:3:6.02:0,6,130	0/0:14,0:3:3.01:0,3,77	0/0:16,0:3:9.03:0,9,230	0/0:21,0:6:17.98:0,18,401	./.	1/1:6,0:5:5.38:78,5,0	0/0:20,0:10:30.09:0,30,621	0/1:24,0:16:99:200,0,872	0/0:56,0:39:99:0,117,2969	0/1:30,2:23:99:272,0,991	0/0:8,0:2:5.54:0,6,25	0/0:13,0:5:8.66:0,9,108	0/0:22,0:18:51.18:0,51,1307	0/0:34,0:14:42.13:0,42,1021	0/1:30,4:25:99:284,0,1210	0/0:3,0:1:3.01:0,3,77
chr10	38939842	.	T	TAGCACC	1626.39	PASS	AB=0.904;AC=9;AF=0.180;AN=50;BaseQRankSum=0.995;DP=498;FS=20.381;HRun=0;HaplotypeScore=90.3245;InbreedingCoeff=-0.0101;MQ=47.87;MQ0=192;MQRankSum=-6.107;QD=10.70;ReadPosRankSum=1.854;VQSLOD=0.1754;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:11,0:6:73.76:74,0,138	0/0:8,1:2:2.84:0,3,14	0/0:7,0:6:18.05:0,18,343	0/0:8,0:7:18.01:0,18,305	0/1:25,0:8:67.28:119,0,67	0/0:13,1:4:8.73:0,9,48	0/0:22,1:4:8.77:0,9,55	0/0:12,0:2:6.02:0,6,90	0/0:28,0:9:17.95:0,18,388	0/1:16,3:9:99:305,0,249	0/1:7,3:4:2.29:189,0,2	0/0:20,0:8:17.59:0,18,223	0/0:13,0:2:5.78:0,6,31	0/0:13,1:3:3.01:0,3,77	0/0:24,0:3:8.66:0,9,105	0/0:24,0:5:14.96:0,15,269	./.	1/1:4,1:4:6.02:180,6,0	0/0:12,0:4:12.02:0,12,255	0/1:18,3:13:99:175,0,684	0/0:45,0:25:72.25:0,72,1816	0/1:25,3:19:99:298,0,784	./.	0/0:13,0:3:3.01:0,3,77	0/0:23,0:18:48.16:0,48,1230	0/0:25,4:10:30.10:0,30,769	0/1:30,3:23:99:420,0,1151	./.
chr10	38939855	.	T	TAGCACC	2122.53	PASS	AB=0.912;AC=11;AF=0.289;AN=38;BaseQRankSum=4.432;DP=462;FS=22.906;HRun=0;HaplotypeScore=72.5598;InbreedingCoeff=-0.0344;MQ=23.54;MQ0=221;MQRankSum=-6.578;QD=12.56;ReadPosRankSum=2.063;VQSLOD=0.7903;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:6,3:4:14.87:184,0,15	./.	./.	./.	0/1:29,3:10:6.67:398,0,7	./.	0/0:19,0:1:1.82:0,2,5	./.	0/0:30,0:6:14.74:0,15,122	0/1:14,2:6:8.88:291,0,9	1/1:11,0:4:6.91:165,7,0	0/0:17,0:4:5.85:0,6,91	./.	0/0:14,0:3:2.88:0,3,15	0/0:26,0:3:2.90:0,3,16	0/0:26,0:4:8.84:0,9,109	./.	1/1:3,1:3:6.02:245,6,0	0/0:9,0:2:6.02:0,6,154	0/1:17,2:8:99:199,0,361	0/0:39,0:18:54.18:0,54,1307	0/1:22,1:14:99:359,0,352	./.	0/0:13,0:2:3.46:0,3,25	0/0:20,0:15:39.13:0,39,992	0/1:26,1:7:57.14:57,0,440	0/1:28,0:18:99:349,0,795	./.
chr10	38939868	.	T	TAGCACC	1996.59	PASS	AB=0.868;AC=15;AF=0.500;AN=30;BaseQRankSum=4.520;DP=443;FS=8.198;HRun=0;HaplotypeScore=53.6792;InbreedingCoeff=0.3050;MQ=19.96;MQ0=257;MQRankSum=-5.602;QD=12.17;ReadPosRankSum=1.838;VQSLOD=0.7497;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,3:2:6.02:151,6,0	./.	./.	./.	1/1:30,5:10:10.86:432,11,0	./.	./.	./.	1/1:30,0:4:2.88:15,3,0	1/1:8,5:3:5.66:149,6,0	1/1:5,5:3:4.26:217,4,0	0/0:16,0:1:2.92:0,3,17	./.	./.	./.	0/0:25,0:1:2.90:0,3,16	./.	1/1:3,0:2:6.02:151,6,0	0/0:10,0:2:6.02:0,6,154	0/1:18,3:7:99:245,0,254	0/0:32,0:10:27.06:0,27,587	0/1:15,3:10:99:376,0,281	./.	./.	0/0:14,0:7:18.05:0,18,410	0/0:24,1:5:15.05:0,15,369	0/1:23,4:18:99:385,0,678	./.
chr10	38939881	.	T	TAGCACC	1790.01	PASS	AB=0.903;AC=15;AF=0.625;AN=24;BaseQRankSum=3.861;DP=407;FS=3.100;HRun=0;HaplotypeScore=47.3545;InbreedingCoeff=-0.1250;MQ=16.23;MQ0=275;MQRankSum=-5.258;QD=10.85;ReadPosRankSum=-0.252;VQSLOD=1.4697;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:6,0:2:16.93:67,0,17	./.	./.	./.	1/1:34,4:10:14.04:521,14,0	./.	./.	./.	1/1:27,2:2:3.01:112,3,0	1/1:7,2:1:3.01:104,3,0	1/1:8,0:1:3.01:109,3,0	./.	./.	./.	./.	./.	./.	1/1:1,1:2:2.54:71,3,0	./.	0/1:12,4:4:65.38:219,0,65	0/0:27,0:6:18.06:0,18,422	0/1:14,2:7:99:310,0,161	./.	./.	0/0:12,0:3:6.02:0,6,154	0/1:18,3:5:74.62:75,0,216	0/1:19,1:13:99:306,0,502	./.
chr10	38939894	.	T	TAGCACC	928.13	PASS	AB=0.941;AC=8;AF=0.80;AN=10;BaseQRankSum=1.395;DP=358;FS=0.000;HRun=0;HaplotypeScore=49.5976;MQ=9.32;MQ0=288;MQRankSum=-2.122;QD=11.46;ReadPosRankSum=0.667;VQSLOD=1.0147;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	1/1:29,5:9:12.49:543,12,0	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	1/1:1,0:1:3.01:71,3,0	./.	0/1:14,0:3:15.95:147,0,16	./.	./.	./.	./.	./.	1/1:17,0:1:3.01:89,3,0	0/1:13,2:7:61.55:154,0,62	./.
chr10	38939907	.	T	TAGCACC	449.64	PASS	AC=6;AF=1.00;AN=6;BaseQRankSum=-0.742;DP=289;FS=0.000;HRun=0;HaplotypeScore=29.5258;MQ=5.66;MQ0=267;MQRankSum=0.742;QD=10.46;ReadPosRankSum=0.742;VQSLOD=1.2869;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	1/1:26,3:5:7.25:232,7,0	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	1/1:7,2:1:3.01:113,3,0	1/1:5,0:2:6.02:171,6,0	./.
chr10	38940362	.	T	TAGCACC	727.90	PASS	AB=0.906;AC=4;AF=0.50;AN=8;BaseQRankSum=1.270;DP=210;FS=0.000;HRun=0;HaplotypeScore=54.6506;MQ=8.46;MQ0=190;MQRankSum=-1.694;QD=20.22;ReadPosRankSum=0.953;VQSLOD=2.8291;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	0/1:10,3:8:44.25:384,0,44	./.	./.	./.	./.	./.	./.	./.	./.	0/0:1,1:1:3.01:0,3,77	./.	./.	./.	./.	./.	./.	./.	./.	1/1:8,2:3:4.26:191,4,0	./.	./.	0/1:12,0:7:59.61:226,0,60	./.	./.	./.	./.	./.
chr10	38940375	.	T	TAGCACC	1000.73	PASS	AB=0.875;AC=8;AF=0.667;AN=12;BaseQRankSum=1.456;DP=213;FS=0.000;HRun=0;HaplotypeScore=81.4889;MQ=11.07;MQ0=180;MQRankSum=-0.271;QD=14.09;ReadPosRankSum=0.173;VQSLOD=2.0751;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/1:15,4:11:99:364,0,137	./.	./.	1/1:10,0:1:3.01:36,3,0	./.	./.	./.	./.	./.	0/0:3,0:1:2.99:0,3,24	./.	./.	./.	./.	./.	./.	./.	./.	1/1:6,3:2:6.02:206,6,0	./.	1/1:9,0:2:6.02:139,6,0	0/1:22,2:16:99:337,0,260	./.	./.	./.	./.	./.
chr10	38940385	.	G	GAATC	212.70	PASS	AB=0.912;AC=4;AF=0.40;AN=10;BaseQRankSum=1.928;DP=221;FS=0.000;HRun=0;HaplotypeScore=101.9106;MQ=12.08;MQ0=180;MQRankSum=-0.293;QD=3.38;ReadPosRankSum=-2.054;VQSLOD=1.6396;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/1:20,0:11:5.47:5,0,256	./.	./.	1/1:15,0:4:5.10:35,5,0	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	0/0:7,0:2:4.57:0,5,56	./.	0/0:14,0:5:9.32:0,9,62	0/1:22,6:18:99:248,0,263	./.	./.	./.	./.	./.
chr10	38940388	.	T	TAGCACC	1400.93	PASS	AB=0.910;AC=6;AF=0.60;AN=10;BaseQRankSum=4.123;DP=228;FS=0.000;HRun=0;HaplotypeScore=103.0480;MQ=12.53;MQ0=182;MQRankSum=1.354;QD=15.57;ReadPosRankSum=-1.750;VQSLOD=2.5671;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/1:17,3:12:99:395,0,177	./.	./.	0/1:13,2:4:24.76:219,0,25	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	1/1:5,1:2:5.93:64,6,0	./.	0/1:14,2:7:19.35:285,0,19	0/1:33,0:19:99:516,0,312	./.	./.	./.	./.	./.
chr10	38940401	.	T	TAGCACC	2342.75	PASS	AB=0.828;AC=6;AF=0.429;AN=14;BaseQRankSum=0.937;DP=235;FS=0.000;HRun=0;HaplotypeScore=98.7647;MQ=13.48;MQ0=178;MQRankSum=-1.673;QD=23.43;ReadPosRankSum=1.160;VQSLOD=3.2100;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	0/1:15,3:11:99:464,0,118	./.	./.	0/1:16,4:8:99:316,0,100	./.	./.	./.	./.	0/0:1,0:1:3.01:0,3,49	1/1:4,0:1:3.01:89,3,0	./.	./.	./.	./.	./.	./.	./.	./.	0/0:4,0:1:2.99:0,3,23	./.	0/1:14,5:10:88.10:678,0,88	0/1:31,8:23:99:878,0,154	./.	./.	./.	./.	./.
chr10	38940414	.	T	TAGCACC	2127.37	PASS	AB=0.865;AC=6;AF=0.500;AN=12;BaseQRankSum=0.920;DP=255;FS=0.000;HRun=0;HaplotypeScore=112.3862;MQ=13.02;MQ0=198;MQRankSum=1.230;QD=19.52;ReadPosRankSum=4.066;VQSLOD=3.1804;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	0/1:13,1:6:51.88:225,0,52	./.	./.	0/1:25,2:12:99:385,0,179	./.	./.	./.	./.	0/0:3,1:1:3.01:0,3,66	1/1:3,1:1:3.01:112,3,0	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	0/1:18,5:11:99:551,0,127	0/1:29,11:24:0.37:931,0,0	./.	./.	./.	./.	./.
chr10	38940427	.	T	TAGCACC	1557.38	PASS	AB=0.905;AC=8;AF=0.667;AN=12;BaseQRankSum=2.601;DP=237;FS=0.000;HRun=0;HaplotypeScore=117.2482;MQ=13.22;MQ0=183;MQRankSum=-0.520;QD=14.97;ReadPosRankSum=0.974;VQSLOD=2.6793;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	1/1:9,2:3:5.87:165,6,0	./.	./.	0/1:25,4:13:99:248,0,104	./.	./.	./.	./.	0/0:3,1:1:3.01:0,3,77	1/1:3,0:1:3.01:41,3,0	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	0/1:25,2:16:99:408,0,249	1/1:29,5:19:28.86:777,29,0	./.	./.	./.	./.	./.
chr10	38940544	.	T	TAGCACC	1576.95	PASS	AB=0.964;AC=11;AF=0.550;AN=20;BaseQRankSum=3.888;DP=269;FS=0.000;HRun=0;HaplotypeScore=48.2744;InbreedingCoeff=0.5381;MQ=10.51;MQ0=233;MQRankSum=-1.587;QD=10.04;ReadPosRankSum=-0.397;VQSLOD=1.5864;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	./.	0/0:6,0:4:8.89:0,9,72	1/1:5,0:3:6.01:57,6,0	./.	1/1:25,2:5:15.05:456,15,0	./.	./.	1/1:24,3:10:29.77:770,30,0	0/0:5,0:3:6.02:0,6,102	0/0:2,0:2:3.01:0,3,37	1/1:24,1:1:3.01:106,3,0	./.	1/1:46,0:2:6.02:211,6,0	./.	./.	./.	./.	./.	./.	0/1:26,1:2:6.22:82,0,6	./.	0/0:7,0:4:12.01:0,12,190	./.	./.
chr10	38940557	.	T	TAGCACC	1613.90	PASS	AB=1.000;AC=13;AF=0.542;AN=24;BaseQRankSum=2.646;DP=287;FS=0.000;HRun=0;HaplotypeScore=51.1502;InbreedingCoeff=0.4597;MQ=11.14;MQ0=244;MQRankSum=0.204;QD=8.41;ReadPosRankSum=-0.642;VQSLOD=1.1987;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	./.	0/0:5,0:4:3.01:0,3,57	0/0:7,1:6:4.47:0,4,196	./.	1/1:25,4:5:15.05:562,15,0	./.	./.	1/1:26,2:10:5.95:549,6,0	0/1:7,0:4:3.15:3,0,145	0/0:3,0:2:6.02:0,6,133	1/1:28,1:1:3.01:89,3,0	1/1:17,1:1:3.01:112,3,0	1/1:48,2:4:11.71:292,12,0	0/0:3,0:1:1.25:0,1,3	./.	./.	./.	./.	./.	1/1:29,1:2:3.48:112,3,0	./.	0/0:6,0:3:7.82:0,8,106	./.	./.
chr10	38940570	.	T	TAGCACC	1872.07	PASS	AB=1.000;AC=13;AF=0.542;AN=24;BaseQRankSum=3.796;DP=306;FS=0.000;HRun=0;HaplotypeScore=50.6764;InbreedingCoeff=0.5435;MQ=11.29;MQ0=259;MQRankSum=0.676;QD=9.27;ReadPosRankSum=1.118;VQSLOD=1.5831;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	./.	0/0:3,0:2:6.02:0,6,135	0/0:11,0:7:18.02:0,18,335	./.	1/1:32,2:6:14.53:394,15,0	./.	./.	1/1:22,9:9:27.09:830,27,0	0/0:7,1:5:9.01:0,9,166	0/0:4,0:3:6.02:0,6,154	1/1:31,2:1:3.01:112,3,0	1/1:16,1:2:6.02:197,6,0	1/1:45,1:4:12:309,12,0	0/1:7,0:3:49.78:50,0,133	./.	./.	./.	./.	./.	1/1:31,1:2:5.23:95,5,0	./.	0/0:4,0:1:3.01:0,3,70	./.	./.
chr10	38940583	.	T	TAGCACC	1535.28	PASS	AB=0.954;AC=9;AF=0.346;AN=26;BaseQRankSum=3.614;DP=320;FS=0.000;HRun=0;HaplotypeScore=49.7425;InbreedingCoeff=0.3207;MQ=11.58;MQ0=269;MQRankSum=0.139;QD=7.24;ReadPosRankSum=1.503;VQSLOD=1.2754;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:3:5.94:0,6,89	./.	./.	./.	./.	0/0:3,0:2:6:0,6,101	0/0:10,0:6:15:0,15,225	./.	0/1:36,1:6:66.56:206,0,67	./.	./.	1/1:28,6:10:26.04:626,26,0	0/0:7,1:5:9.03:0,9,219	0/0:4,0:3:9:0,9,86	1/1:32,2:1:3.01:47,3,0	1/1:18,2:3:9.03:255,9,0	0/1:53,3:4:45.89:326,0,46	0/0:7,1:3:9.03:0,9,208	./.	./.	./.	./.	./.	0/1:29,2:4:2.41:188,0,2	./.	0/0:3,0:1:3:0,3,29	./.	./.
chr10	38940596	.	T	TAGCACC	1159.94	PASS	AB=0.950;AC=6;AF=0.250;AN=24;BaseQRankSum=3.081;DP=318;FS=0.000;HRun=0;HaplotypeScore=56.8162;InbreedingCoeff=-0.0752;MQ=11.29;MQ0=269;MQRankSum=-0.138;QD=6.34;ReadPosRankSum=1.763;VQSLOD=1.4357;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:3:6.02:0,6,142	./.	./.	./.	./.	0/0:3,0:2:2.99:0,3,24	0/0:5,0:3:6.02:0,6,154	./.	0/1:37,1:6:99:207,0,190	./.	./.	0/1:30,5:10:73.02:568,0,73	0/0:7,0:4:12.01:0,12,174	0/0:4,0:3:3.01:0,3,77	0/0:33,0:2:3.01:0,3,30	1/1:22,0:3:9.03:182,9,0	0/1:55,1:5:45.75:200,0,46	0/0:9,0:3:9.01:0,9,178	./.	./.	./.	./.	./.	0/1:31,1:4:9.17:101,0,9	./.	./.	./.	./.
chr10	38940609	.	T	TAGCACC	631.03	PASS	AB=0.930;AC=6;AF=0.273;AN=22;BaseQRankSum=0.726;DP=308;FS=0.000;HRun=0;HaplotypeScore=52.3610;InbreedingCoeff=-0.1455;MQ=10.34;MQ0=268;MQRankSum=-0.770;QD=3.41;ReadPosRankSum=1.298;VQSLOD=1.3044;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:2:6:0,6,101	./.	./.	./.	./.	./.	0/0:4,0:2:5.99:0,6,48	./.	0/1:38,0:4:38.71:55,0,39	./.	./.	0/1:28,5:9:86.44:384,0,86	0/0:6,0:3:2.99:0,3,24	0/0:2,0:2:6:0,6,55	0/0:30,0:2:6:0,6,81	0/1:20,3:2:17.52:106,0,18	0/1:59,0:7:37.58:38,0,116	0/0:7,2:2:6:0,6,101	./.	./.	./.	./.	./.	1/1:28,2:3:5.77:143,6,0	./.	./.	./.	./.
chr10	38940765	.	T	TAGCACC	2080.81	PASS	AB=0.944;AC=8;AF=0.222;AN=36;BaseQRankSum=7.853;DP=2351;DS;FS=50.225;HRun=0;HaplotypeScore=124.9267;InbreedingCoeff=-0.0910;MQ=14.35;MQ0=1051;MQRankSum=-6.719;QD=3.28;ReadPosRankSum=-2.301;VQSLOD=0.2080;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:10,2:4:66.39:163,0,66	0/0:112,0:4:2.85:0,3,77	./.	./.	0/0:223,0:15:3:0,3,29	./.	./.	./.	0/0:246,0:10:13.22:0,13,118	./.	0/0:1,0:1:1.82:0,2,5	0/1:193,2:75:42.43:42,0,3957	./.	./.	0/0:250,0:12:13.81:0,14,151	0/0:246,0:9:8.95:0,9,115	1/1:113,12:15:33.90:1027,34,0	0/0:12,0:2:3.01:0,3,75	0/1:15,1:5:97.65:98,0,292	0/0:26,0:5:6.02:0,6,154	0/1:67,3:7:99:195,0,106	0/0:249,0:14:3:0,3,78	0/0:129,0:47:84.21:0,84,1851	0/1:180,9:88:99:524,0,4412	0/0:76,0:25:35.77:0,36,689	0/1:26,1:4:99:149,0,142	./.	./.
chr10	38940801	.	GAATC	G	174.63	PASS	AB=0.977;AC=7;AF=0.206;AN=34;BaseQRankSum=5.811;DP=1319;DS;FS=1.906;HRun=0;HaplotypeScore=177.1760;InbreedingCoeff=-0.1499;MQ=40.43;MQ0=425;MQRankSum=-3.597;QD=0.69;ReadPosRankSum=-4.435;VQSLOD=1.7279;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:8,0:4:16.17:16,0,17	./.	0/1:34,3:21:99:156,0,550	0/1:24,1:16:50.94:51,0,582	./.	./.	./.	./.	0/0:99,0:10:12.11:0,12,85	./.	1/1:1,0:1:0.47:1,0,0	0/0:162,0:105:99:0,286,7019	./.	./.	0/0:96,0:10:14.44:0,14,80	0/1:114,0:12:26.43:26,0,61	0/1:67,0:23:25.71:26,0,149	0/0:7,0:2:5.54:0,6,25	0/0:9,0:3:3:0,3,26	./.	0/0:37,0:8:1.74:0,2,61	0/0:81,0:8:5.40:0,5,25	0/0:118,0:77:99:0,190,4647	0/0:206,0:140:99:0,306,8287	0/0:55,0:40:99:0,102,2582	0/0:9,0:3:5.78:0,6,35	./.	./.
chr10	38940804	.	T	TAG	3819.90	PASS	AB=0.919;AC=23;AF=0.639;AN=36;BaseQRankSum=12.235;DP=1000;DS;FS=100.557;HRun=0;HaplotypeScore=154.7470;InbreedingCoeff=0.6786;MQ=49.92;MQ0=269;MQRankSum=-10.562;QD=7.40;ReadPosRankSum=-1.175;VQSLOD=-0.5924;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,4:4:12.04:221,12,0	./.	0/0:44,0:27:64.53:0,65,679	0/0:26,0:17:34.52:0,35,450	./.	./.	./.	./.	1/1:39,9:8:21.07:424,21,0	./.	0/0:1,0:1:0:0,0,0	0/0:140,6:106:99:0,151,4387	./.	./.	1/1:49,6:17:26.84:374,27,0	1/1:54,10:12:18.06:374,18,0	1/1:36,22:36:63.22:1250,63,0	1/1:1,2:2:6.02:122,6,0	1/1:2,2:1:3.01:58,3,0	./.	1/1:8,12:8:18.06:349,18,0	1/1:46,2:8:6.02:121,6,0	0/0:111,0:77:99:0,198,3054	0/1:177,17:148:99:382,0,5026	0/0:59,0:44:99:0,105,1650	1/1:5,2:3:6.02:121,6,0	1/1:6,0:1:2.99:24,3,0	./.
chr10	38940983	.	T	TAGCACC	5833.26	PASS	AB=0.947;AC=13;AF=0.283;AN=46;BaseQRankSum=8.387;DP=2157;DS;FS=136.543;HRun=0;HaplotypeScore=152.8698;InbreedingCoeff=-0.4579;MQ=17.26;MQ0=1260;MQRankSum=-9.382;QD=3.65;ReadPosRankSum=5.594;VQSLOD=-0.5076;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:25,2:14:99:455,0,165	0/0:137,0:8:24.08:0,24,614	./.	./.	0/0:176,0:5:9.03:0,9,230	0/0:20,0:5:3.01:0,3,77	./.	./.	0/1:222,1:13:99:147,0,338	0/0:6,0:3:6.02:0,6,125	./.	0/1:139,5:33:99:1267,0,900	0/1:27,14:17:68.02:150,0,68	0/0:20,0:4:6.02:0,6,154	0/1:218,0:16:99:133,0,255	0/1:190,0:26:99:200,0,895	0/1:190,9:93:99:1235,0,2185	0/1:18,0:14:99:202,0,323	0/1:18,0:3:37.07:37,0,145	0/0:30,0:4:6.02:0,6,154	0/1:63,25:35:99:306,0,607	0/1:183,0:7:91.77:103,0,92	0/1:81,0:23:58.55:59,0,145	0/1:158,7:69:99:1538,0,1347	0/0:44,0:5:15.05:0,15,384	0/0:27,0:2:6.02:0,6,154	0/0:20,0:4:12.04:0,12,277	0/0:27,0:3:9.03:0,9,230
chr10	38940996	.	T	TAGCACC	5763.84	PASS	AB=0.954;AC=15;AF=0.375;AN=40;BaseQRankSum=4.948;DP=1750;DS;FS=78.058;HRun=0;HaplotypeScore=119.9786;InbreedingCoeff=-0.3898;MQ=15.85;MQ0=1043;MQRankSum=-4.577;QD=4.24;ReadPosRankSum=3.672;VQSLOD=-0.3298;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:23,1:8:62.20:288,0,62	0/0:86,0:3:6.02:0,6,144	./.	./.	0/0:119,0:1:3.01:0,3,68	./.	./.	./.	0/1:225,0:26:95.83:402,0,96	0/0:4,0:1:3:0,3,28	./.	0/1:124,7:24:99:1185,0,285	0/1:39,0:15:17.16:41,0,17	./.	0/1:192,1:5:67.74:191,0,68	1/1:160,3:11:8.06:528,8,0	0/1:133,6:39:99:982,0,521	0/1:8,3:9:99:284,0,107	0/1:17,0:3:79.82:80,0,135	0/0:14,0:1:3.01:0,3,77	0/1:68,1:27:99:291,0,107	1/1:132,1:2:2.74:96,3,0	0/1:74,0:39:60.18:84,0,60	0/1:126,11:47:81.41:1312,0,81	0/0:26,0:3:6:0,6,100	./.	0/0:17,0:2:3.90:0,4,79	0/0:22,0:1:3.01:0,3,77
chr10	38941009	.	T	TAGCACC	4233.42	PASS	AB=0.962;AC=19;AF=0.679;AN=28;BaseQRankSum=0.729;DP=1296;DS;FS=19.852;HRun=0;HaplotypeScore=110.1989;InbreedingCoeff=-0.3442;MQ=19.26;MQ0=728;MQRankSum=-0.996;QD=4.18;ReadPosRankSum=0.863;VQSLOD=2.1439;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:22,1:4:8.86:100,9,0	./.	./.	./.	./.	./.	./.	./.	1/1:186,2:62:10.28:298,10,0	./.	./.	0/1:80,10:15:99:766,0,108	0/0:33,0:14:2.99:0,3,23	./.	0/1:145,2:2:70.73:106,0,71	0/1:112,5:9:39.22:599,0,39	0/1:98,1:9:99:274,0,167	0/1:8,0:5:99:144,0,139	1/1:17,1:1:3.01:113,3,0	./.	1/1:56,2:24:9.02:230,9,0	1/1:62,0:1:3.01:99,3,0	1/1:81,1:62:1.75:111,2,0	0/1:91,11:31:9.96:1324,0,10	./.	./.	0/1:12,0:2:69.61:70,0,71	./.
chr10	38941022	.	T	TAGCACC	3029.20	PASS	AB=0.949;AC=14;AF=0.538;AN=26;BaseQRankSum=1.756;DP=870;DS;FS=20.793;HRun=0;HaplotypeScore=105.0251;InbreedingCoeff=-0.0714;MQ=25.88;MQ0=521;MQRankSum=-1.221;QD=4.67;ReadPosRankSum=-0.152;VQSLOD=0.6723;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,1:3:2.13:0,2,5	./.	./.	./.	./.	./.	./.	./.	1/1:47,90:94:8.81:336,9,0	./.	./.	0/1:51,4:13:99:539,0,166	0/0:22,3:13:0:0,0,0	./.	0/1:71,1:3:14.89:188,0,15	1/1:39,3:8:20.74:555,21,0	0/1:88,1:5:90.17:124,0,90	0/0:7,0:5:11.59:0,12,193	./.	./.	0/1:50,0:24:17.86:195,0,18	0/1:24,0:2:0.59:1,0,43	1/1:95,0:89:2.62:96,3,0	1/1:68,5:21:6.88:1007,7,0	./.	./.	0/1:3,0:2:70.84:93,0,71	./.
chr10	38941035	.	T	TAGCACC	1906.29	PASS	AB=0.910;AC=12;AF=0.500;AN=24;BaseQRankSum=2.140;DP=865;FS=11.937;HRun=0;HaplotypeScore=87.7733;InbreedingCoeff=-0.2402;MQ=26.47;MQ0=516;MQRankSum=-1.549;QD=3.07;ReadPosRankSum=-1.874;VQSLOD=0.4331;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	0/0:15,0:1:0:0,0,0	./.	./.	./.	1/1:155,1:94:8.81:247,9,0	./.	./.	0/1:40,5:7:71.92:188,0,72	0/0:23,1:13:0:0,0,0	./.	1/1:85,1:2:6.02:176,6,0	0/1:45,3:7:6.12:479,0,6	0/1:79,2:4:99:154,0,110	0/0:4,0:2:3.46:0,3,25	./.	./.	./.	1/1:20,0:4:8.28:110,8,0	0/1:116,1:113:20.27:77,0,20	0/1:52,6:12:43.42:544,0,43	./.	./.	0/1:3,0:2:28.79:29,0,71	./.
chr10	38941048	.	T	TAGCACC	1495.43	PASS	AB=0.904;AC=11;AF=0.423;AN=26;BaseQRankSum=1.599;DP=894;FS=4.175;HRun=0;HaplotypeScore=75.5614;InbreedingCoeff=-0.1529;MQ=26.29;MQ0=552;MQRankSum=0.623;QD=2.19;ReadPosRankSum=0.387;VQSLOD=1.4687;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	0/0:6,0:1:1.25:0,1,3	./.	./.	0/1:14,0:2:5.26:5,0,12	./.	./.	./.	0/1:166,1:93:3.87:185,0,4	./.	0/0:5,0:1:0:0,0,0	0/1:46,1:5:25.23:55,0,25	0/0:30,0:13:0.47:0,0,1	./.	1/1:113,1:1:3.01:112,3,0	0/1:56,1:5:7.12:348,0,7	0/1:76,0:3:92.67:103,0,93	./.	./.	./.	./.	1/1:21,1:6:17.73:457,18,0	0/1:10,124:138:2.69:89,0,3	0/1:37,3:6:12.38:236,0,12	./.	./.	0/0:6,0:2:5.99:0,6,48	./.
chr10	38941061	.	T	TAGCACC	1577.02	PASS	AB=0.992;AC=17;AF=0.654;AN=26;BaseQRankSum=0.866;DP=818;FS=14.914;HRun=0;HaplotypeScore=77.9708;InbreedingCoeff=0.1272;MQ=25.05;MQ0=530;MQRankSum=-0.365;QD=2.60;ReadPosRankSum=0.000;VQSLOD=-0.2270;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	1/1:6,0:1:1.25:3,1,0	./.	./.	1/1:12,1:4:12.04:214,12,0	./.	./.	./.	1/1:162,0:89:5.80:94,6,0	./.	1/1:4,0:1:2.60:10,3,0	0/0:44,2:4:5.99:0,6,48	0/0:23,1:7:0:0,0,0	./.	1/1:116,0:1:3.01:121,3,0	0/1:61,1:4:7.42:142,0,7	0/1:63,0:3:18.30:47,0,18	./.	./.	./.	0/0:8,0:2:2.98:0,3,22	1/1:21,3:8:23.11:695,23,0	0/1:124,1:113:56.08:162,0,56	1/1:27,1:4:4.82:189,5,0	./.	./.	./.	./.
chr10	38941074	.	T	TAGCACC	1799.10	PASS	AB=0.981;AC=15;AF=0.682;AN=22;BaseQRankSum=0.562;DP=688;FS=20.348;HRun=0;HaplotypeScore=45.6379;InbreedingCoeff=0.1698;MQ=25.07;MQ0=448;MQRankSum=-0.241;QD=5.50;ReadPosRankSum=0.401;VQSLOD=-0.4124;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	1/1:7,0:1:3.01:80,3,0	./.	./.	1/1:10,3:5:15.05:369,15,0	./.	./.	./.	0/0:151,0:82:0.47:0,0,1	./.	1/1:4,0:1:3.01:86,3,0	./.	./.	./.	1/1:103,1:1:3.01:121,3,0	1/1:55,0:2:2.99:50,3,0	0/0:43,0:1:0:0,0,0	./.	./.	./.	0/0:8,0:2:2.99:0,3,24	1/1:18,7:10:30.10:935,30,0	0/1:103,2:94:47.37:210,0,47	1/1:12,0:2:0.77:34,1,0	./.	./.	./.	./.
chr10	38941087	.	T	TAGCACC	1890.73	PASS	AB=1.000;AC=13;AF=0.813;AN=16;BaseQRankSum=-1.040;DP=607;FS=13.979;HRun=0;HaplotypeScore=59.0048;MQ=23.11;MQ0=419;MQRankSum=-1.733;QD=5.15;ReadPosRankSum=0.208;VQSLOD=0.2143;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	1/1:6,1:2:6.02:191,6,0	./.	./.	1/1:8,4:7:21.07:537,21,0	./.	./.	./.	0/1:140,0:70:0:0,0,0	./.	1/1:3,1:1:3.01:109,3,0	./.	./.	./.	1/1:101,0:1:3.01:110,3,0	./.	./.	./.	./.	./.	./.	1/1:21,4:10:29.69:726,30,0	1/1:76,1:62:8.89:292,9,0	0/0:10,0:2:2.22:0,2,7	./.	./.	./.	./.
chr10	38941100	.	T	TAGCACC	1313.24	PASS	AC=10;AF=1.00;AN=10;BaseQRankSum=0.520;DP=547;FS=0.000;HRun=0;HaplotypeScore=56.8715;MQ=18.13;MQ0=419;MQRankSum=-0.694;QD=12.51;ReadPosRankSum=-0.520;VQSLOD=1.3888;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	1/1:7,2:2:6.02:213,6,0	./.	./.	1/1:13,2:10:17.57:381,18,0	./.	./.	./.	./.	./.	1/1:3,0:1:3.01:109,3,0	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	1/1:20,0:7:20.86:460,21,0	1/1:50,7:37:5.80:219,6,0	./.	./.	./.	./.	./.
chr10	38941165	.	T	TGGCACC	1753.87	PASS	AB=0.966;AC=12;AF=0.250;AN=48;BaseQRankSum=0.480;DP=843;FS=19.971;HRun=0;HaplotypeScore=85.1210;InbreedingCoeff=-0.2523;MQ=14.59;MQ0=455;MQRankSum=-2.348;QD=4.47;ReadPosRankSum=-0.407;VQSLOD=-0.0400;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:10,0:3:12.25:12,0,50	0/1:41,0:3:26.76:48,0,27	./.	./.	0/0:76,0:4:5.86:0,6,35	0/0:10,0:1:3.01:0,3,58	./.	./.	0/1:36,3:17:99:543,0,265	0/0:39,0:6:12.04:0,12,258	1/1:16,0:2:2.94:18,3,0	0/1:27,0:7:99:201,0,101	0/0:7,0:2:6.02:0,6,116	0/0:6,0:3:9.03:0,9,166	0/1:32,3:9:99:388,0,108	0/1:26,1:8:37.01:421,0,37	0/1:51,0:10:72.66:73,0,335	0/0:3,0:2:6.02:0,6,131	0/0:16,0:2:6.02:0,6,129	0/0:36,0:3:6.02:0,6,119	0/0:21,0:7:18.06:0,18,454	0/0:85,0:4:4.70:0,5,91	0/1:102,0:10:34.24:34,0,109	0/1:26,0:14:69.82:70,0,418	0/0:74,0:6:18.06:0,18,420	0/0:35,0:7:18.03:0,18,350	0/1:14,0:4:81.58:82,0,169	0/0:16,0:5:15.05:0,15,366
chr10	38941178	.	T	TAGCACC	1548.93	PASS	AB=0.982;AC=22;AF=0.440;AN=50;BaseQRankSum=8.456;DP=902;FS=0.748;HRun=0;HaplotypeScore=114.1490;InbreedingCoeff=0.2171;MQ=17.61;MQ0=442;MQRankSum=-6.709;QD=3.38;ReadPosRankSum=0.717;VQSLOD=1.9161;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:6:10.78:170,11,0	0/1:42,1:5:97.50:98,0,197	./.	./.	0/0:82,0:7:17.79:0,18,300	1/1:13,0:4:5.66:34,6,0	1/1:6,0:2:6.01:73,6,0	./.	0/1:38,2:21:99:227,0,973	0/1:42,0:8:51.23:115,0,51	1/1:17,0:2:3.90:115,4,0	0/1:28,1:7:99:189,0,189	1/1:10,0:5:7.22:56,7,0	1/1:9,0:6:11.67:123,12,0	0/0:36,0:14:31.33:0,31,689	0/1:25,1:10:84.01:84,0,379	0/0:45,0:14:33.11:0,33,750	1/1:5,0:4:5.14:45,5,0	0/0:22,0:3:9.03:0,9,231	0/0:38,0:4:9.03:0,9,230	0/0:29,0:14:39.13:0,39,971	0/1:84,0:6:41.04:41,0,242	0/1:106,0:12:99:245,0,214	0/0:23,1:15:15.64:0,16,436	0/0:81,0:9:21.07:0,21,531	0/0:41,0:10:28.34:0,28,693	0/1:14,0:4:99:105,0,142	0/0:17,0:6:15.05:0,15,384
chr10	38941191	.	T	TAGCACC	6301.47	PASS	AB=0.965;AC=24;AF=0.462;AN=52;BaseQRankSum=-2.013;DP=935;FS=15.674;HRun=0;HaplotypeScore=117.1981;InbreedingCoeff=0.2893;MQ=20.72;MQ0=401;MQRankSum=-6.961;QD=11.25;ReadPosRankSum=-0.699;VQSLOD=2.7664;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:12,6:10:24.02:666,24,0	0/1:45,1:10:99:134,0,309	0/0:7,0:1:3.01:0,3,54	./.	0/1:84,0:10:18.82:19,0,240	1/1:11,6:8:21.07:764,21,0	1/1:7,3:6:18.06:672,18,0	./.	0/1:36,3:26:99:264,0,1345	1/1:35,7:11:3.17:872,3,0	1/1:16,2:3:6.02:193,6,0	0/1:26,2:7:99:243,0,285	1/1:6,6:7:21.07:783,21,0	1/1:5,7:9:24.04:805,24,0	0/0:30,0:15:43.03:0,43,989	0/1:24,1:10:87.86:88,0,556	0/0:41,0:19:45.15:0,45,1109	1/1:1,4:4:12.04:431,12,0	0/0:23,0:3:9.03:0,9,231	0/0:39,0:5:9.03:0,9,231	0/0:35,0:21:60.21:0,60,1472	0/1:82,1:7:99:101,0,147	0/1:98,2:14:99:177,0,208	0/0:24,0:16:23.51:0,24,464	0/0:84,0:13:33.11:0,33,843	0/0:39,0:9:27.08:0,27,639	0/1:19,1:10:88.45:88,0,421	0/0:18,0:7:21.07:0,21,537
chr10	38941214	.	GAATC	G	14865.53	PASS	AB=0.786;AC=48;AF=0.857;AN=56;BaseQRankSum=2.114;DP=631;FS=23.989;HRun=0;HaplotypeScore=119.7043;InbreedingCoeff=0.3839;MQ=47.77;MQ0=182;MQRankSum=-4.449;QD=25.94;ReadPosRankSum=3.437;VQSLOD=2.9721;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,19:17:38.73:680,39,0	1/1:14,11:12:33.11:569,33,0	0/1:21,1:14:53.07:53,0,777	0/0:23,1:19:51.85:0,52,1296	1/1:32,9:13:0.69:286,1,0	1/1:0,20:14:42.14:772,42,0	1/1:2,7:7:21.07:367,21,0	1/1:2,9:6:15.05:270,15,0	1/1:10,24:31:37.92:1246,38,0	1/1:4,16:14:42.14:768,42,0	1/1:1,8:7:21.07:362,21,0	1/1:16,7:7:21.07:382,21,0	1/1:0,13:12:36.12:662,36,0	1/1:0,14:14:42.14:772,42,0	1/1:3,21:18:36.98:865,37,0	1/1:7,15:17:30.69:796,31,0	0/1:13,14:22:3.22:717,0,3	1/1:1,8:8:24.08:426,24,0	1/1:0,16:11:33.06:508,33,0	1/1:8,7:7:18.06:330,18,0	1/1:3,31:29:78.27:1435,78,0	1/1:26,10:11:6.59:301,7,0	0/1:44,14:21:99:541,0,192	0/1:15,7:18:44.94:45,0,224	0/0:34,0:16:37.33:0,37,966	1/1:4,14:12:36.12:662,36,0	1/1:2,14:13:34.36:610,34,0	1/1:3,9:9:24.08:442,24,0
chr10	38941217	.	T	TAG	1505.01	PASS	AB=0.882;AC=12;AF=0.214;AN=56;BaseQRankSum=-2.344;DP=559;FS=64.414;HRun=0;HaplotypeScore=153.8038;InbreedingCoeff=-0.2771;MQ=51.88;MQ0=114;MQRankSum=-5.592;QD=5.39;ReadPosRankSum=-2.815;VQSLOD=0.4124;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,1:17:15.17:0,15,153	0/1:15,4:12:66.18:139,0,66	0/0:23,0:14:40.80:0,41,557	0/0:25,0:20:50.39:0,50,820	0/1:23,4:13:51.92:215,0,52	0/0:20,0:14:40.64:0,41,220	0/0:7,0:7:17.20:0,17,86	0/1:9,0:6:8.90:9,0,48	0/1:25,8:31:99:468,0,208	0/0:17,0:14:30.27:0,30,191	0/1:9,0:7:13.23:13,0,46	0/1:16,7:7:38.56:39,0,73	0/0:13,0:12:34.80:0,35,188	0/0:14,0:14:40.61:0,41,219	0/1:21,2:18:71.59:72,0,186	0/1:17,3:17:99:152,0,153	0/1:18,8:22:99:248,0,164	0/0:9,0:8:3.47:0,3,90	0/1:16,0:11:9.97:10,0,71	0/0:11,0:7:17.44:0,17,96	0/0:32,0:29:75.33:0,75,406	0/1:21,3:11:38.96:206,0,39	0/1:44,3:21:83.63:84,0,218	0/0:21,1:18:20.96:0,21,270	0/0:28,0:16:45.15:0,45,706	0/0:14,0:12:18.85:0,19,157	0/0:14,1:13:31.70:0,32,168	0/0:9,0:9:23.22:0,23,126
chr10	38941408	.	T	TA	1324.83	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-7.976;DP=516;FS=4.350;HRun=10;HaplotypeScore=59.1349;InbreedingCoeff=0.9432;MQ=74.03;MQ0=0;MQRankSum=1.289;QD=19.48;ReadPosRankSum=1.597;VQSLOD=4.7020;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:95.84:0,96,787	0/0:6,0:6:8.97:0,9,74	0/0:19,0:18:34.27:0,34,247	0/0:10,0:10:12.02:0,12,155	0/0:20,0:19:44.88:0,45,369	0/0:30,0:25:59.87:0,60,488	0/0:12,0:12:35.96:0,36,295	0/0:17,0:17:35.94:0,36,294	0/0:15,0:15:38.89:0,39,314	0/0:29,0:28:74.14:0,74,608	0/0:10,0:12:28.98:0,29,223	1/1:4,19:21:23.31:437,23,0	0/0:23,0:22:53.91:0,54,443	0/0:19,0:18:38.94:0,39,320	0/0:15,0:12:26.96:0,27,222	0/0:17,0:16:44.95:0,45,369	0/0:30,0:29:68.90:0,69,566	0/0:19,0:19:41.88:0,42,334	0/0:13,0:14:21.56:0,22,256	0/0:11,0:11:25.95:0,26,211	0/0:9,0:10:23.01:0,23,178	0/0:17,0:17:38.94:0,39,320	1/1:7,9:16:10.44:290,10,0	1/1:4,24:28:69.17:736,69,0	0/0:20,0:20:41.92:0,42,345	0/0:16,0:15:41.93:0,42,343	0/0:13,0:13:29.94:0,30,243	0/0:13,0:8:14.97:0,15,123
chr10	38942746	.	A	AGTGT	9962.85	PASS	AC=46;AF=0.852;AN=54;BaseQRankSum=0.714;DP=706;FS=3.966;HRun=0;HaplotypeScore=182.4706;InbreedingCoeff=0.7791;MQ=51.12;MQ0=7;MQRankSum=0.626;QD=17.39;ReadPosRankSum=0.545;VQSLOD=4.0592;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:32:3.97:270,4,0	1/1:11,0:12:9.03:175,9,0	0/0:47,0:21:21.07:0,21,293	0/0:43,0:24:16.76:0,17,259	1/1:12,12:24:42.14:932,42,0	1/1:15,0:24:32.47:545,32,0	1/1:11,0:20:22.87:359,23,0	1/1:42,0:39:24.49:332,24,0	1/1:11,10:24:47.37:921,47,0	1/1:23,0:27:21.06:316,21,0	1/1:19,0:22:17.98:225,18,0	1/1:9,0:26:32.88:528,33,0	1/1:11,0:17:14.64:249,15,0	1/1:21,0:25:18.06:317,18,0	1/1:13,11:25:42.12:934,42,0	1/1:14,9:23:36.11:795,36,0	1/1:19,14:36:12.06:1135,12,0	1/1:20,0:22:15:202,15,0	1/1:22,0:22:14.90:168,15,0	1/1:23,0:22:3.01:52,3,0	0/0:18,0:18:0.70:0,1,2	1/1:12,7:20:29.84:637,30,0	1/1:24,0:34:17.09:266,17,0	1/1:18,0:22:6.02:102,6,0	0/0:15,0:17:36.11:0,36,542	1/1:24,0:23:16.16:202,16,0	1/1:26,0:25:21.07:302,21,0	./.
chr10	38942771	.	G	GTGTGTGTGTGTGTGTA	12811.42	PASS	AB=1.000;AC=33;AF=0.589;AN=56;BaseQRankSum=0.224;DP=629;FS=8.954;HRun=0;HaplotypeScore=311.4935;InbreedingCoeff=-0.2389;MQ=51.64;MQ0=6;MQRankSum=-8.102;QD=24.22;ReadPosRankSum=-1.460;VQSLOD=1.7277;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:34,0:34:99:309,0,172	0/1:8,0:8:34.23:110,0,34	0/0:45,0:20:53.63:0,54,730	0/0:39,0:22:41.06:0,41,593	0/1:24,0:24:43.97:44,0,426	0/1:29,0:29:99:638,0,181	0/1:27,0:27:99:258,0,235	1/1:36,0:33:87:2117,87,0	0/1:21,0:21:50.51:51,0,720	0/1:25,0:25:99:921,0,127	0/1:17,0:17:32.88:165,0,33	1/1:17,0:17:2.59:442,3,0	0/1:14,0:14:9.98:429,0,10	0/1:21,0:21:10.85:502,0,11	0/1:19,0:19:87.46:87,0,379	0/1:15,0:15:58.73:59,0,369	0/1:31,0:31:91.09:91,0,815	0/1:22,0:22:99:350,0,184	1/1:17,0:16:41.97:1388,42,0	1/1:21,1:21:21.03:959,21,0	1/1:18,0:18:12.16:98,12,0	0/1:19,0:19:2.71:3,0,429	0/1:23,0:23:49.85:256,0,50	0/1:17,0:17:48.07:48,0,77	0/0:15,0:15:42.11:0,42,1615	1/1:23,1:23:58.91:1517,59,0	1/1:20,2:22:40.49:1836,40,0	1/1:6,0:6:17.89:133,18,0
chr10	38942825	.	TG	T	6364.55	PASS	AB=0.975;AC=46;AF=0.821;AN=56;BaseQRankSum=0.563;DP=542;FS=1.121;HRun=10;HaplotypeScore=97.1896;InbreedingCoeff=0.7246;MQ=69.99;MQ0=0;MQRankSum=-5.221;QD=13.69;ReadPosRankSum=3.580;VQSLOD=5.0360;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,30:36:80.98:703,81,0	1/1:2,7:9:20.99:182,21,0	0/1:17,1:17:18.76:19,0,241	0/1:20,0:18:26.18:26,0,254	1/1:5,14:19:44.94:384,45,0	1/1:7,19:26:47.97:417,48,0	1/1:8,18:26:47.86:407,48,0	1/1:6,0:26:35.65:104,36,0	1/1:2,14:16:41.99:365,42,0	1/1:1,17:18:47.94:410,48,0	1/1:3,11:14:32.95:279,33,0	0/0:14,0:14:8.03:0,8,247	1/1:1,10:11:29.99:260,30,0	1/1:1,12:13:29.99:260,30,0	1/1:4,11:15:32.98:286,33,0	1/1:1,13:14:35.99:313,36,0	1/1:5,24:30:38.78:558,39,0	1/1:4,17:21:44.98:391,45,0	1/1:1,0:14:23.29:68,23,0	1/1:1,0:21:31.80:93,32,0	1/1:5,0:30:41.67:122,42,0	1/1:2,18:20:53.98:469,54,0	0/0:18,1:19:30.07:0,30,324	0/0:29,0:29:44.44:0,44,487	0/0:8,0:15:11.69:0,12,75	1/1:0,0:19:36.45:107,36,0	1/1:2,0:10:14.26:42,14,0	1/1:0,0:17:34.63:102,35,0
chr10	38943053	.	ATCTTCATCG	A	5013.19	PASS	AB=0.964;AC=18;AF=0.333;AN=54;BaseQRankSum=4.128;DP=480;FS=0.000;HRun=0;HaplotypeScore=182.2283;InbreedingCoeff=0.3040;MQ=70.29;MQ0=0;MQRankSum=-8.719;QD=29.15;ReadPosRankSum=3.808;VQSLOD=4.3207;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:72:0,72,1912	0/1:2,0:2:20.98:40,0,21	0/0:34,0:30:74.36:0,74,1981	0/0:20,0:17:51.16:0,51,1675	0/1:15,0:13:99:233,0,140	0/0:30,0:29:87.29:0,87,2558	0/0:17,0:17:36.10:0,36,908	1/1:0,17:17:51.10:690,51,0	0/1:15,0:15:99:354,0,102	0/0:22,0:22:60.12:0,60,1499	0/0:12,0:12:14.56:0,15,292	0/0:12,0:12:33.11:0,33,775	0/0:21,0:21:48.15:0,48,1530	0/0:20,0:20:36.11:0,36,984	0/1:19,0:19:25.70:611,0,26	0/1:17,0:17:99:474,0,141	0/1:21,0:21:99:361,0,107	0/0:10,0:10:18.05:0,18,463	1/1:0,17:17:51.14:820,51,0	1/1:3,1:4:5.90:41,6,0	1/1:16,1:17:11.98:151,12,0	0/1:9,0:9:99:173,0,109	0/0:21,0:21:60.10:0,60,1240	0/0:29,0:29:75.14:0,75,1853	0/0:21,0:21:63.09:0,63,1891	0/1:3,2:5:93.79:184,0,94	1/1:5,9:14:42.02:881,42,0	./.
chr10	38943056	.	T	TTCATTG	4921.25	PASS	AB=0.833;AC=17;AF=0.327;AN=52;BaseQRankSum=-4.700;DP=487;FS=6.374;HRun=0;HaplotypeScore=170.0861;InbreedingCoeff=0.8583;MQ=67.86;MQ0=0;MQRankSum=-0.533;QD=27.19;ReadPosRankSum=-0.867;VQSLOD=4.1810;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:16,28:44:70.13:1773,70,0	0/0:2,0:2:5.99:0,6,80	0/0:35,0:29:69.19:0,69,1232	0/0:21,0:18:48.15:0,48,957	0/0:16,0:14:26.99:0,27,397	1/1:30,0:29:29.30:685,29,0	1/1:16,0:16:24.23:253,24,0	0/0:17,0:17:45.01:0,45,514	0/0:14,0:14:30.06:0,30,466	1/1:8,13:22:7.74:758,8,0	1/1:6,5:11:8.85:188,9,0	0/0:12,0:12:33.07:0,33,614	1/1:21,0:21:42.57:464,43,0	1/1:19,0:19:28.32:309,28,0	0/0:17,0:17:42.14:0,42,776	0/0:17,0:17:39.04:0,39,641	0/0:21,0:21:32.96:0,33,496	1/1:5,7:13:16.21:403,16,0	0/0:17,0:17:51.01:0,51,631	./.	0/0:17,0:17:8.93:0,9,83	0/0:11,0:11:18.03:0,18,304	0/0:22,0:22:48.12:0,48,898	0/0:28,0:28:72.25:0,72,1473	0/0:21,0:21:51.03:0,51,899	0/1:4,1:5:74.87:89,0,75	0/0:14,0:14:39.10:0,39,506	./.
chr10	38943059	.	A	ATTG	4217.14	PASS	AB=0.994;AC=14;AF=0.269;AN=52;BaseQRankSum=-2.658;DP=482;FS=1.481;HRun=0;HaplotypeScore=145.5000;InbreedingCoeff=0.5849;MQ=65.22;MQ0=0;MQRankSum=0.284;QD=23.30;ReadPosRankSum=2.785;VQSLOD=5.0429;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:42,1:43:66.50:595,0,67	0/0:2,0:2:5.99:0,6,61	0/0:35,0:29:69.22:0,69,1109	0/0:23,0:20:54.13:0,54,881	0/0:15,0:13:27.04:0,27,328	1/1:8,21:29:46.46:1305,46,0	1/1:5,11:18:23.72:433,24,0	0/0:17,0:17:45.07:0,45,552	0/0:13,0:13:29.54:0,30,337	0/1:18,0:18:67.68:258,0,68	0/1:14,0:14:12.41:61,0,12	0/0:12,0:12:33.11:0,33,523	1/1:2,18:20:42.62:829,43,0	1/1:4,18:22:28.34:543,28,0	0/0:18,0:18:42.12:0,42,537	0/0:16,0:16:39:0,39,482	0/0:20,0:20:32.92:0,33,361	1/1:12,0:12:15.21:165,15,0	0/0:17,0:17:51:0,51,596	./.	0/0:16,0:16:8.94:0,9,107	0/0:11,0:11:18.05:0,18,243	0/0:21,0:21:48.16:0,48,695	0/0:28,0:28:72.25:0,72,1145	0/0:20,0:20:51.06:0,51,758	0/1:4,0:4:29.62:30,0,33	0/0:14,0:14:38.84:0,39,343	./.
chr10	38943062	.	GTCATCATCA	G	4969.25	PASS	AB=1.000;AC=23;AF=0.442;AN=52;BaseQRankSum=0.238;DP=482;FS=2.476;HRun=0;HaplotypeScore=181.6833;InbreedingCoeff=0.8139;MQ=61.22;MQ0=0;MQRankSum=-8.589;QD=34.51;ReadPosRankSum=3.109;VQSLOD=4.8216;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:42:66.23:0,66,2186	1/1:0,1:1:3.01:85,3,0	0/0:33,0:26:45.03:0,45,1285	0/0:24,0:21:48.16:0,48,1697	1/1:3,12:13:18.02:445,18,0	0/0:31,0:30:78.25:0,78,2734	0/0:16,0:16:27.08:0,27,917	./.	1/1:2,10:12:24.08:680,24,0	0/0:19,0:19:42.14:0,42,1385	0/0:13,0:13:8.96:0,9,239	0/0:5,0:12:21.05:0,21,373	0/0:22,0:22:48.15:0,48,1735	0/0:22,0:22:27.09:0,27,1044	1/1:1,17:18:39.13:1106,39,0	1/1:4,12:16:30.10:850,30,0	1/1:1,17:18:24.08:680,24,0	0/0:12,0:12:18.06:0,18,589	1/1:17,0:17:9.03:178,9,0	1/1:3,0:3:2.68:11,3,0	1/1:15,0:15:0.89:2,1,0	1/1:3,9:12:12.04:340,12,0	0/0:6,0:25:39.13:0,39,735	0/0:6,0:28:58.61:0,59,1139	0/0:21,0:22:45.15:0,45,1597	0/1:4,0:4:99:110,0,109	1/1:13,0:13:25.33:482,25,0	./.
chr10	38943075	.	TCATCATCATCATCACCAC	T	2837.08	PASS	AB=0.900;AC=11;AF=0.204;AN=54;BaseQRankSum=2.660;DP=492;FS=1.953;HRun=0;HaplotypeScore=272.8714;InbreedingCoeff=0.7479;MQ=52.82;MQ0=1;MQRankSum=-3.143;QD=37.83;ReadPosRankSum=-1.833;VQSLOD=2.2563;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,99,5464	0/0:1,0:1:3.01:0,3,62	0/0:35,0:26:75.24:0,75,3465	0/0:29,0:24:69.23:0,69,4158	0/0:13,0:11:23.99:0,24,382	0/0:30,0:29:87.30:0,87,6178	0/0:18,0:18:39.59:0,40,2313	1/1:26,0:26:47.66:355,48,0	0/0:13,0:13:30.10:0,30,665	0/0:22,0:22:60.21:0,60,3635	0/0:13,0:13:17.54:0,18,660	0/0:12,0:12:33.10:0,33,1471	0/0:22,0:22:48.16:0,48,3738	0/0:18,0:18:36.04:0,36,2457	0/0:19,0:19:45.14:0,45,895	0/0:16,0:16:42.13:0,42,854	0/0:18,0:18:27.09:0,27,567	0/0:11,0:11:21.07:0,21,1368	1/1:13,3:16:11.40:450,11,0	1/1:4,1:5:3.01:79,3,0	1/1:0,1:1:3.01:89,3,0	0/0:10,0:10:12.04:0,12,245	0/0:22,0:22:45.15:0,45,2568	0/0:29,0:29:78.22:0,78,3939	0/0:21,0:21:57.20:0,57,3762	0/1:16,2:18:99:759,0,196	1/1:0,9:9:27.09:1265,27,0	./.
chr10	38943087	.	TCACCAC	T	2885.01	PASS	AB=0.934;AC=17;AF=0.315;AN=54;BaseQRankSum=7.349;DP=517;FS=2.948;HRun=0;HaplotypeScore=172.8305;InbreedingCoeff=0.3222;MQ=55.33;MQ0=1;MQRankSum=-7.789;QD=15.10;ReadPosRankSum=1.957;VQSLOD=3.0948;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,108,2329	0/0:2,0:2:1.17:0,1,45	0/0:33,0:28:74.69:0,75,1620	0/0:26,0:22:60.20:0,60,1661	0/1:15,0:13:29.49:29,0,61	0/0:28,0:27:84.29:0,84,2321	0/0:18,0:18:39.13:0,39,945	1/1:0,21:21:63.15:840,63,0	0/1:16,0:16:14.94:15,0,270	0/0:20,0:20:54.14:0,54,1289	0/0:9,0:9:14.94:0,15,245	0/0:13,0:13:36.12:0,36,590	0/0:24,0:24:54.19:0,54,1463	0/0:21,0:21:44.98:0,45,1043	0/1:22,0:22:41.22:41,0,196	0/1:18,0:18:24.74:25,0,256	0/1:22,0:22:18.81:19,0,193	0/0:11,0:11:24.08:0,24,567	1/1:13,0:12:33.11:604,33,0	1/1:1,6:7:3.01:37,3,0	1/1:12,0:12:5.23:55,5,0	0/1:11,0:11:6.95:7,0,89	0/0:24,0:24:51.13:0,51,729	0/0:31,0:31:52.69:0,53,1275	0/0:21,0:21:63.22:0,63,1601	0/1:3,19:22:27.60:777,0,28	1/1:12,0:12:32.32:611,32,0	./.
chr10	38943831	.	AT	A	2228.76	PASS	AB=0.889;AC=15;AF=0.268;AN=56;BaseQRankSum=8.798;DP=437;FS=13.596;HRun=11;HaplotypeScore=44.0885;InbreedingCoeff=0.9041;MQ=66.54;MQ0=11;MQRankSum=-3.100;QD=15.81;ReadPosRankSum=-1.562;VQSLOD=2.3489;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:36.04:0,36,358	0/0:7,0:7:12.03:0,12,128	0/0:19,1:10:17.38:0,17,131	0/0:13,0:6:8.66:0,9,76	0/0:22,0:22:51.60:0,52,543	0/0:31,0:31:81.20:0,81,856	0/0:20,1:20:22.76:0,23,459	1/1:9,34:41:89.60:756,90,0	0/0:13,0:13:30.07:0,30,319	0/0:14,0:14:36.09:0,36,383	0/0:7,0:7:21.05:0,21,224	0/0:14,0:14:36.09:0,36,383	0/0:6,0:4:9.02:0,9,91	0/0:11,0:11:30.08:0,30,320	0/0:13,0:13:32.95:0,33,320	0/0:10,0:10:27.06:0,27,282	0/0:26,0:26:63.16:0,63,672	0/0:26,1:26:60.13:0,60,630	1/1:3,19:21:53.85:434,54,0	1/1:4,17:20:50.78:404,51,0	1/1:2,7:9:14.98:123,15,0	0/0:3,0:3:9.02:0,9,96	0/1:7,1:8:0.59:1,0,194	0/0:14,0:14:36.07:0,36,370	0/0:7,0:6:18.05:0,18,192	1/1:2,10:12:29.95:244,30,0	1/1:2,18:20:41.91:339,42,0	1/1:1,5:6:14.98:123,15,0
chr10	38943921	.	T	TTC	819.79	PASS	AB=0.873;AC=26;AF=0.565;AN=46;BaseQRankSum=0.625;DP=490;FS=0.000;HRun=0;HaplotypeScore=91.0154;InbreedingCoeff=0.4147;MQ=76.38;MQ0=13;MQRankSum=-2.832;QD=2.82;ReadPosRankSum=0.929;VQSLOD=1.4681;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:20:8.06:56,8,0	0/0:2,0:3:2.84:0,3,14	./.	0/1:64,0:32:0.01:0,0,0	1/1:20,0:20:2.99:24,3,0	0/1:24,0:24:13.72:17,0,14	1/1:26,0:24:8.97:70,9,0	./.	1/1:16,0:16:6.01:68,6,0	1/1:18,0:16:3.22:12,3,0	./.	0/0:11,0:11:9.02:0,9,98	1/1:9,0:9:5.93:42,6,0	1/1:9,0:9:2.99:24,3,0	0/1:8,4:12:23.49:80,0,23	0/1:12,6:20:84.88:196,0,85	1/1:21,1:23:24.86:242,25,0	1/1:12,0:12:9.87:94,10,0	./.	0/0:17,0:17:11.65:0,12,92	0/0:12,0:12:5.82:0,6,36	1/1:3,0:5:3:26,3,0	./.	0/0:21,0:24:26.90:0,27,272	0/0:6,0:11:11.36:0,11,56	0/0:20,0:20:14.86:0,15,139	0/0:12,0:13:5.82:0,6,36	1/1:10,0:10:2.99:23,3,0
chr10	38943927	.	C	CTCTCTTTCTCTCTCTCTT	3622	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=-3.528;DP=514;FS=3.041;HRun=0;HaplotypeScore=206.4342;InbreedingCoeff=0.7043;MQ=72.71;MQ0=14;MQRankSum=-2.360;QD=27.03;ReadPosRankSum=1.237;VQSLOD=2.3909;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:23:3.55:616,4,0	0/0:3,0:3:9:0,9,150	0/0:33,0:13:14.58:0,15,135	0/0:64,0:30:37.26:0,37,325	0/0:23,0:23:54.26:0,54,720	0/1:23,0:23:27.45:209,0,27	1/1:24,0:22:51.12:726,51,0	0/0:20,0:19:19.94:0,20,376	0/0:17,0:17:35.31:0,35,535	1/1:18,0:16:16.25:601,16,0	1/1:10,0:10:2.10:311,2,0	0/0:11,0:11:27.08:0,27,687	1/1:8,0:9:24:581,24,0	1/1:2,4:14:3.01:260,3,0	0/0:11,0:10:17.98:0,18,393	0/0:20,0:20:35.61:0,36,1006	0/0:24,0:23:2.03:0,2,505	1/1:11,0:11:2.75:318,3,0	0/0:13,0:12:31.60:0,32,361	0/0:20,0:19:51.17:0,51,985	0/0:16,0:15:27.06:0,27,460	0/0:6,0:6:6.19:0,6,119	0/0:11,0:11:26.64:0,27,385	0/0:25,0:24:54.12:0,54,1563	0/0:15,0:14:39.07:0,39,660	0/0:25,0:24:27.16:0,27,954	0/0:12,0:12:23.94:0,24,352	0/0:11,0:11:27.04:0,27,344
chr10	38943929	.	C	CTCTTTCTCTCTCTCTT	3177.51	PASS	AB=0.867;AC=12;AF=0.214;AN=56;BaseQRankSum=-4.233;DP=518;FS=0.491;HRun=0;HaplotypeScore=191.6340;InbreedingCoeff=0.4455;MQ=71.63;MQ0=14;MQRankSum=-3.344;QD=23.36;ReadPosRankSum=1.526;VQSLOD=2.7604;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:24:19.96:620,0,20	0/0:3,0:3:9:0,9,161	0/0:32,0:12:14.58:0,15,135	0/0:64,0:30:37.82:0,38,315	0/0:23,0:23:54.28:0,54,715	0/1:6,15:28:18.55:243,0,19	1/1:22,0:21:51.08:755,51,0	0/0:21,0:20:22.95:0,23,405	0/0:16,0:16:18.98:0,19,500	1/1:18,0:16:16.15:592,16,0	1/1:10,0:10:2.10:311,2,0	0/0:11,0:11:27.08:0,27,662	0/1:9,0:10:10.17:288,0,10	1/1:9,0:10:5.89:229,6,0	0/0:13,0:12:17.98:0,18,350	0/0:20,0:20:34.96:0,35,881	0/0:24,0:23:2.56:0,3,505	0/1:11,0:11:11.72:299,0,12	0/0:13,0:12:32.26:0,32,365	0/0:20,0:19:51.54:0,52,958	0/0:17,0:16:33.06:0,33,497	0/0:6,0:6:1.64:0,2,134	0/0:12,0:12:27:0,27,385	0/0:24,0:23:54.12:0,54,1463	0/0:17,0:16:39.06:0,39,656	0/0:25,0:24:27.18:0,27,948	0/0:11,0:11:26.86:0,27,371	0/0:10,0:10:27.04:0,27,344
chr10	38945941	.	GT	G	1988.19	PASS	AB=0.822;AC=33;AF=0.589;AN=56;BaseQRankSum=7.885;DP=579;FS=6.109;HRun=15;HaplotypeScore=82.2723;InbreedingCoeff=0.4732;MQ=71.47;MQ0=2;MQRankSum=0.037;QD=4.62;ReadPosRankSum=2.433;VQSLOD=2.0849;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:21,2:25:34.31:34,0,321	1/1:3,3:7:7.91:44,8,0	0/1:30,0:19:18.35:18,0,100	0/0:22,1:18:12.41:0,12,67	0/1:11,15:26:1.16:240,0,1	0/1:19,2:21:15.67:16,0,227	0/0:10,1:12:7.55:0,8,173	1/1:11,0:23:24.53:71,25,0	1/1:4,10:14:28.17:190,28,0	0/0:24,0:25:41.74:0,42,342	0/0:24,2:28:16.69:0,17,388	0/0:14,0:17:35.78:0,36,285	0/0:11,0:11:29.91:0,30,244	0/0:11,1:13:13.53:0,14,222	1/1:3,14:19:37.42:237,37,0	0/1:6,18:26:9.27:193,0,9	1/1:6,13:20:14.02:208,14,0	0/1:17,5:22:41.60:42,0,190	1/1:11,1:31:36.69:116,37,0	1/1:5,3:32:47.45:168,47,0	1/1:0,0:6:10.19:29,10,0	1/1:5,7:15:10.47:113,10,0	0/0:19,0:19:6.92:0,7,270	0/1:18,3:28:7.28:7,0,371	1/1:3,16:19:14.99:223,15,0	1/1:7,0:20:21.91:65,22,0	1/1:6,0:31:41.01:120,41,0	1/1:1,0:14:18.32:53,18,0
chr10	38949239	.	AAG	A	2035.76	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=1.548;DP=574;FS=1.666;HRun=0;HaplotypeScore=112.7720;InbreedingCoeff=0.9941;MQ=61.84;MQ0=23;MQRankSum=-0.793;QD=12.34;ReadPosRankSum=-2.158;VQSLOD=3.2614;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:33,3:35:63.91:479,64,0	0/0:6,0:6:18.01:0,18,182	0/0:41,0:10:24.04:0,24,318	0/0:29,0:8:17.05:0,17,196	0/0:34,0:33:84.54:0,85,883	1/1:19,3:22:42.33:332,42,0	1/1:22,2:23:37.39:309,37,0	0/0:23,0:20:26.14:0,26,389	0/0:19,0:19:36.65:0,37,503	1/1:20,0:18:41.61:272,42,0	1/1:24,2:26:48.88:307,49,0	0/0:13,0:13:30.01:0,30,279	1/1:10,0:10:24.66:133,25,0	1/1:11,1:12:30.83:177,31,0	0/0:12,0:12:30.03:0,30,284	0/0:11,0:11:29.99:0,30,275	0/0:31,0:30:78.07:0,78,745	1/1:13,2:15:35.01:235,35,0	0/0:22,0:21:51.07:0,51,519	0/0:20,0:19:48.06:0,48,471	0/0:7,0:6:17.52:0,18,154	0/0:14,0:14:38.98:0,39,357	0/0:23,0:23:55.20:0,55,533	0/0:23,0:23:65.08:0,65,589	0/0:17,0:17:48.14:0,48,748	0/0:24,0:24:46.17:0,46,591	0/0:28,0:27:60.76:0,61,542	0/0:12,0:12:33.04:0,33,352
chr10	38949240	.	AG	A	4787.19	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-5.414;DP=569;FS=1.148;HRun=1;HaplotypeScore=94.0720;InbreedingCoeff=0.9913;MQ=62.79;MQ0=23;MQRankSum=1.666;QD=29.19;ReadPosRankSum=-3.087;VQSLOD=3.8678;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,21:35:87.83:974,88,0	0/0:6,0:6:17.85:0,18,147	0/0:41,0:10:23.92:0,24,237	0/0:30,0:9:20.63:0,21,188	0/0:33,0:32:61.48:0,61,569	1/1:9,13:22:60.48:679,60,0	1/1:10,14:23:65.63:763,66,0	0/0:23,0:20:24.45:0,24,215	0/0:19,0:19:14.38:0,14,308	1/1:13,7:18:50.77:500,51,0	1/1:2,22:24:59.83:642,60,0	0/0:11,0:11:29.29:0,29,179	1/1:5,6:11:33.03:374,33,0	1/1:2,10:12:33.05:417,33,0	0/0:12,0:12:29.50:0,30,195	0/0:11,0:11:29.33:0,29,177	0/0:30,0:29:76.16:0,76,459	1/1:8,7:15:39.03:438,39,0	0/0:22,0:21:44.61:0,45,335	0/0:18,0:17:46.85:0,47,304	0/0:7,0:6:16.42:0,16,89	0/0:14,0:14:38.05:0,38,231	0/0:23,0:23:52.58:0,53,368	0/0:23,0:23:62.75:0,63,373	0/0:18,0:18:51.04:0,51,592	0/0:25,0:25:23.24:0,23,372	0/0:27,0:26:58.41:0,58,355	0/0:12,0:12:32.21:0,32,224
chr10	38949241	.	G	GA	6582.03	PASS	AB=0.926;AC=35;AF=0.625;AN=56;BaseQRankSum=-11.411;DP=585;FS=2.968;HRun=10;HaplotypeScore=95.9627;InbreedingCoeff=0.7359;MQ=63.81;MQ0=23;MQRankSum=0.392;QD=18.18;ReadPosRankSum=-1.129;VQSLOD=4.7434;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:37:2.97:0,3,58	0/1:5,2:7:15.62:55,0,16	0/0:38,0:10:23.82:0,24,193	0/0:28,0:10:19.37:0,19,118	1/1:8,25:32:47.50:699,48,0	0/0:21,0:21:25.06:0,25,75	0/0:24,0:23:9.26:0,9,74	1/1:5,17:21:51.02:522,51,0	1/1:7,12:20:14.72:330,15,0	0/1:19,0:17:1.75:92,0,2	0/0:25,0:25:3.62:0,4,35	1/1:2,9:11:24.06:256,24,0	0/1:12,0:12:10.03:12,0,10	0/0:12,0:12:13.93:0,14,37	1/1:5,9:14:21.01:212,21,0	1/1:2,9:11:24.06:256,24,0	1/1:6,25:30:66.17:703,66,0	0/0:15,0:15:13.51:0,14,37	1/1:6,13:19:25.63:408,26,0	1/1:3,16:19:38.97:398,39,0	1/1:1,8:8:18.05:192,18,0	1/1:5,10:15:30.07:319,30,0	1/1:8,16:24:15.33:356,15,0	1/1:5,16:24:53.47:502,53,0	0/0:18,0:18:47.87:0,48,383	1/1:7,17:26:35.11:519,35,0	1/1:5,24:28:45.05:480,45,0	1/1:3,9:13:26.90:270,27,0
chr10	38949336	.	GTCTGTCTGTCTCTC	G	3963.41	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=0.909;DP=617;FS=4.643;HRun=0;HaplotypeScore=243.1398;InbreedingCoeff=0.9532;MQ=50.79;MQ0=15;MQRankSum=-5.349;QD=27.33;ReadPosRankSum=0.280;VQSLOD=2.3558;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:26,3:25:18.05:433,18,0	0/0:9,0:9:18.06:0,18,727	0/0:9,0:9:18.03:0,18,257	0/0:14,0:9:3.85:0,4,100	0/0:34,0:34:69.20:0,69,1875	1/1:14,6:20:27.09:807,27,0	1/1:19,1:18:27.01:454,27,0	0/0:27,0:24:50.99:0,51,682	0/0:24,0:24:32.85:0,33,1043	1/1:28,0:27:69.01:958,69,0	1/1:15,2:17:15.05:304,15,0	0/0:16,0:16:14.59:0,15,291	1/1:9,2:11:21.06:451,21,0	1/1:9,1:10:18.03:336,18,0	0/0:26,0:25:72.14:0,72,2194	0/0:11,0:11:18.06:0,18,653	0/0:31,0:31:76.39:0,76,2853	1/1:10,0:7:12.04:221,12,0	0/0:28,0:26:64.03:0,64,1834	0/0:34,0:33:31.63:0,32,552	0/0:27,0:26:23.46:0,23,698	0/0:24,0:23:48.13:0,48,1406	0/0:34,0:34:54.60:0,55,1386	0/0:36,0:36:77.75:0,78,3089	0/0:19,0:16:14.99:0,15,280	0/0:33,0:31:85.13:0,85,2024	0/0:22,0:22:52.36:0,52,1210	0/0:14,0:13:39.13:0,39,1153
chr10	38949338	.	CTG	C	1055.89	PASS	AB=0.980;AC=19;AF=0.339;AN=56;BaseQRankSum=5.600;DP=622;FS=24.757;HRun=0;HaplotypeScore=152.3332;InbreedingCoeff=0.0420;MQ=50.30;MQ0=15;MQRankSum=-1.135;QD=3.21;ReadPosRankSum=-1.696;VQSLOD=1.1744;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:25:13.61:73,0,14	0/1:9,0:9:8.22:8,0,266	0/0:7,0:7:18.04:0,18,293	0/0:14,0:9:20.97:0,21,231	0/1:37,0:37:55.48:55,0,976	1/1:19,0:19:25.66:169,26,0	1/1:19,0:17:4.13:132,4,0	0/0:27,0:25:51.28:0,51,939	0/0:25,0:25:24.58:0,25,494	0/1:26,0:25:99:209,0,298	1/1:17,0:17:16.49:119,16,0	0/0:15,0:15:14.66:0,15,266	0/1:11,0:11:28.22:94,0,28	1/1:11,0:11:7.83:64,8,0	0/1:24,2:25:45.05:45,0,917	0/0:11,0:11:2.44:0,2,266	0/1:29,3:32:99:112,0,837	0/1:10,0:7:30.17:52,0,30	0/1:29,1:28:16.70:17,0,786	0/0:35,0:34:0.78:0,1,250	0/1:28,1:27:72.99:73,0,210	0/1:24,0:23:4.55:5,0,710	0/0:34,0:34:50.96:0,51,851	0/0:34,2:36:5.88:0,6,904	0/0:19,0:16:12.91:0,13,151	0/0:34,0:31:60.04:0,60,907	0/0:22,0:22:26.87:0,27,724	0/0:14,0:13:39.13:0,39,714
chr10	38949344	.	G	GTCTCTCTC	4136.47	PASS	AB=0.907;AC=30;AF=0.577;AN=52;BaseQRankSum=-7.100;DP=610;FS=0.000;HRun=0;HaplotypeScore=198.0443;InbreedingCoeff=0.5344;MQ=47.51;MQ0=16;MQRankSum=4.871;QD=9.44;ReadPosRankSum=-2.748;VQSLOD=2.1769;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:28:9.03:0,9,128	1/1:9,0:9:5.95:43,6,0	0/0:4,0:4:3.01:0,3,33	./.	1/1:35,0:36:28.66:255,29,0	0/0:20,0:20:14.31:0,14,184	0/0:21,0:19:5.99:0,6,57	1/1:33,0:31:20.87:181,21,0	0/1:25,0:25:55.19:103,0,55	0/0:24,0:23:29.96:0,30,338	./.	0/1:7,7:14:0.10:0,0,0	0/0:11,0:11:9.03:0,9,113	0/0:9,0:9:6.02:0,6,87	1/1:22,0:21:0.62:214,1,0	1/1:14,0:14:5.97:73,6,0	0/1:34,0:34:40.57:243,0,41	0/0:12,0:8:6.02:0,6,99	1/1:32,0:29:35.87:478,36,0	1/1:34,0:33:18.06:295,18,0	1/1:29,0:27:21.46:387,21,0	0/1:25,0:25:32.44:135,0,32	1/1:30,1:32:15.51:226,16,0	1/1:34,1:36:47.15:703,47,0	0/0:16,0:13:6.02:0,6,101	1/1:30,0:27:39.48:545,39,0	1/1:18,0:18:14.99:169,15,0	1/1:14,0:13:6.02:85,6,0
chr10	38949346	.	C	CTG	1119.79	PASS	AB=0.959;AC=17;AF=0.315;AN=54;BaseQRankSum=3.112;DP=596;FS=18.742;HRun=0;HaplotypeScore=155.3309;InbreedingCoeff=-0.3077;MQ=47.28;MQ0=16;MQRankSum=-1.578;QD=3.04;ReadPosRankSum=2.823;VQSLOD=1.3719;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:32,0:28:16.25:16,0,46	0/0:9,0:9:1.56:0,2,84	0/0:3,0:3:3.01:0,3,36	./.	0/0:34,0:34:26.06:0,26,313	0/0:19,0:19:10.62:0,11,111	0/1:19,0:17:25.39:25,0,82	0/1:33,0:31:99:105,0,131	0/1:26,0:26:4.62:5,0,81	0/1:25,0:24:74.57:75,0,199	0/0:14,0:14:11.88:0,12,88	0/0:13,0:13:8.78:0,9,75	0/1:11,0:11:2.83:3,0,76	0/1:9,0:9:15.96:16,0,52	0/0:22,0:21:10.27:0,10,208	0/1:13,0:13:10.45:10,0,60	0/0:35,0:35:27.75:0,28,293	0/1:12,0:8:6.09:6,0,48	0/1:30,0:27:99:175,0,149	0/1:13,19:32:14.79:15,0,105	0/1:28,0:26:73.56:98,0,74	0/0:24,0:23:6.23:0,6,152	0/0:31,0:31:43.26:0,43,374	0/1:36,0:36:10.68:11,0,390	0/0:17,0:14:6.01:0,6,70	0/1:20,9:26:99:128,0,226	0/1:18,0:18:32.97:240,0,33	1/1:14,0:13:38.87:343,39,0
chr10	38949374	.	C	CTCTCTG	4953	PASS	AB=0.971;AC=31;AF=0.554;AN=56;BaseQRankSum=-0.761;DP=577;FS=7.391;HRun=0;HaplotypeScore=164.9088;InbreedingCoeff=-0.1592;MQ=61.18;MQ0=14;MQRankSum=-1.954;QD=10.63;ReadPosRankSum=1.594;VQSLOD=3.4932;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:34:3.94:0,4,31	1/1:4,0:10:6.02:145,6,0	0/0:23,0:18:43.36:0,43,394	0/1:26,0:18:7.22:7,0,242	1/1:21,0:27:50.93:821,51,0	0/1:20,0:20:14.95:15,0,57	1/1:19,0:17:1.36:26,1,0	0/0:29,0:28:23.19:0,23,397	1/1:2,21:25:9.57:240,10,0	0/1:19,0:19:31.59:116,0,32	1/1:17,0:17:9.43:69,9,0	0/1:15,0:16:38.67:39,0,150	0/1:11,0:11:12.24:37,0,12	0/1:10,0:10:7.17:7,0,19	1/1:11,2:14:14.30:713,14,0	1/1:1,12:13:6.02:173,6,0	1/1:35,0:39:59.49:1064,59,0	0/0:11,0:9:5.40:0,5,25	0/1:21,0:20:99:237,0,116	0/1:22,0:21:17.21:17,0,131	0/1:30,0:27:99:117,0,171	0/1:11,0:23:19.16:302,0,19	0/1:27,0:27:20.11:20,0,136	0/1:31,0:32:99:407,0,115	0/0:13,0:10:18.01:0,18,217	0/1:25,0:22:99:142,0,123	0/1:12,0:12:68.54:69,0,83	0/1:6,0:6:27.89:170,0,28
chr10	38949381	.	T	TC	1023.49	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=8.596;DP=552;FS=3.038;HRun=0;HaplotypeScore=130.7911;InbreedingCoeff=0.8903;MQ=67.22;MQ0=11;MQRankSum=-6.382;QD=6.69;ReadPosRankSum=-0.695;VQSLOD=3.4129;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:38,0:37:9.94:105,10,0	0/0:9,0:9:8.98:0,9,102	0/0:27,0:22:66.21:0,66,893	0/0:28,0:20:51.92:0,52,680	0/0:26,0:26:50.76:0,51,516	1/1:17,3:20:14.33:138,14,0	1/1:18,3:20:8.92:92,9,0	0/0:28,0:27:74.87:0,75,692	0/0:26,0:26:19.71:0,20,221	1/1:15,5:19:14.70:398,15,0	1/1:11,7:18:11.82:119,12,0	0/0:14,0:14:24.08:0,24,334	1/1:9,3:12:18.05:227,18,0	1/1:8,2:10:5.68:42,6,0	0/0:13,0:13:35.84:0,36,348	0/0:12,0:12:5.75:0,6,42	0/0:31,0:31:77.61:0,78,843	1/1:14,0:12:9:95,9,0	0/0:18,0:18:50.73:0,51,518	0/0:17,0:16:39.07:0,39,420	0/0:31,0:30:41.48:0,41,505	0/0:21,0:20:17.95:0,18,196	0/0:22,0:22:36.12:0,36,502	0/0:30,0:30:63.97:0,64,805	0/0:13,0:11:18.06:0,18,251	0/0:22,0:19:53.45:0,53,564	0/0:9,0:9:23.98:0,24,248	0/0:2,0:2:6.01:0,6,55
chr10	38949383	.	T	TCGG	2508.71	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=5.558;DP=571;FS=1.090;HRun=0;HaplotypeScore=144.7601;InbreedingCoeff=0.9181;MQ=70.16;MQ0=10;MQRankSum=-7.987;QD=15.02;ReadPosRankSum=-4.400;VQSLOD=2.8729;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,2:37:14.99:181,15,0	0/0:9,0:9:8.92:0,9,94	0/0:28,0:23:69.19:0,69,1121	0/0:31,0:23:56.03:0,56,971	0/0:25,0:25:47.27:0,47,490	1/1:9,13:22:44.95:452,45,0	1/1:8,0:24:15.01:211,15,0	0/0:28,0:27:75.24:0,75,1001	0/0:26,0:26:25.14:0,25,270	1/1:11,10:22:52.19:934,52,0	1/1:11,7:18:20.75:326,21,0	0/0:14,0:14:24.04:0,24,446	1/1:3,10:14:21.03:395,21,0	1/1:4,7:12:8.98:83,9,0	0/0:13,0:13:29.96:0,30,300	0/0:12,0:12:5.96:0,6,35	0/0:30,0:30:72.98:0,73,770	1/1:1,1:14:6.02:126,6,0	0/0:18,0:18:51.02:0,51,677	0/0:17,0:16:39.13:0,39,620	0/0:29,0:28:52.84:0,53,799	0/0:22,0:21:20.66:0,21,237	0/0:23,0:23:39.12:0,39,683	0/0:30,0:30:61:0,61,1038	0/0:13,0:11:18.06:0,18,335	0/0:23,0:20:51.05:0,51,716	0/0:9,0:9:24.01:0,24,354	0/0:4,0:4:6.02:0,6,86
chr10	38949754	.	T	TA	3772.65	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=7.675;DP=465;FS=0.000;HRun=4;HaplotypeScore=79.0001;InbreedingCoeff=0.9570;MQ=69.06;MQ0=16;MQRankSum=-2.708;QD=32.81;ReadPosRankSum=-0.987;VQSLOD=3.6449;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:27:46.83:0,47,443	0/0:5,0:5:12.03:0,12,136	0/0:37,0:16:27.20:0,27,277	0/0:27,0:6:8.97:0,9,87	0/0:19,0:19:36.10:0,36,414	0/0:22,0:22:54.13:0,54,600	0/0:13,0:13:34.65:0,35,377	1/1:5,22:26:66.21:884,66,0	0/0:15,0:15:21.06:0,21,238	0/0:20,0:20:54.15:0,54,611	0/0:13,0:13:30.09:0,30,340	0/0:8,0:8:23.98:0,24,256	0/0:16,0:14:38.60:0,39,417	0/0:10,0:10:27.08:0,27,306	0/0:16,0:16:33.06:0,33,361	0/0:17,0:17:44.64:0,45,510	0/0:20,0:20:44.99:0,45,492	0/0:22,0:21:48.14:0,48,544	1/1:2,16:18:48.16:653,48,0	1/1:3,16:19:44.25:534,44,0	1/1:0,4:4:8.99:102,9,0	0/0:8,0:8:15.03:0,15,161	0/0:19,0:18:48.09:0,48,530	0/0:5,0:5:8.89:0,9,83	0/0:10,0:10:24.05:0,24,261	1/1:3,17:19:54.18:726,54,0	1/1:2,14:15:27.64:547,28,0	1/1:3,8:9:23.77:327,24,0
chr10	38950484	.	A	AGT	3995.98	PASS	AB=1.000;AC=42;AF=0.750;AN=56;BaseQRankSum=-1.912;DP=553;FS=3.669;HRun=0;HaplotypeScore=139.0485;InbreedingCoeff=0.1124;MQ=67.83;MQ0=0;MQRankSum=-1.169;QD=7.99;ReadPosRankSum=-1.999;VQSLOD=3.1457;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:25:0:0,0,0	1/1:9,0:9:14.81:100,15,0	0/1:23,0:21:7.98:8,0,93	0/0:21,0:17:8.52:0,9,67	0/0:12,0:12:0:0,0,0	1/1:10,0:20:6:53,6,0	1/1:21,0:30:17.96:160,18,0	1/1:20,0:20:19.90:284,20,0	1/1:8,0:8:3:26,3,0	1/1:19,0:19:14.71:104,15,0	1/1:12,0:12:5.99:48,6,0	1/1:4,18:22:31:661,31,0	1/1:7,0:15:20.92:176,21,0	1/1:12,0:20:15:131,15,0	1/1:12,0:12:3:26,3,0	1/1:10,0:10:3:26,3,0	1/1:29,0:29:15:132,15,0	1/1:13,0:13:3.94:28,4,0	0/1:23,0:23:52.19:52,0,71	0/1:18,0:18:63.89:64,0,97	0/1:41,0:41:82.37:82,0,284	1/1:12,0:12:3:25,3,0	1/1:6,14:20:26.83:436,27,0	1/1:7,27:34:69.24:1112,69,0	0/0:19,0:20:56.91:0,57,608	0/1:29,0:29:78.55:79,0,128	0/1:23,0:23:89.86:144,0,90	0/1:11,0:11:40.60:41,0,78
chr10	38950498	.	T	TGTGTGTGTGTGAGCGC	8150.69	PASS	AB=0.915;AC=32;AF=0.571;AN=56;BaseQRankSum=0.153;DP=553;FS=0.961;HRun=0;HaplotypeScore=252.9766;InbreedingCoeff=0.2765;MQ=58.72;MQ0=0;MQRankSum=-9.729;QD=20.33;ReadPosRankSum=-2.245;VQSLOD=3.4434;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:17,0:34:0:0,0,0	1/1:9,0:9:15.05:499,15,0	0/1:13,0:11:7.96:8,0,170	0/1:15,0:13:23.19:23,0,138	0/1:3,11:17:0.02:0,0,0	0/1:17,0:17:63.55:64,0,98	0/1:27,0:28:99:399,0,115	0/1:22,0:22:39.25:39,0,522	1/1:3,7:13:6.02:329,6,0	1/1:12,0:19:54.18:2125,54,0	1/1:11,0:12:5.74:192,6,0	0/0:21,0:21:50.87:0,51,1007	1/1:16,0:15:24.08:504,24,0	1/1:18,0:18:18.06:344,18,0	1/1:4,8:14:2.54:237,3,0	1/1:2,8:13:3.01:238,3,0	1/1:11,14:32:30.10:1910,30,0	1/1:19,0:19:19.62:906,20,0	0/1:21,0:21:0.43:0,0,1078	0/0:15,0:15:35.59:0,36,1019	0/0:39,0:40:74.94:0,75,3351	1/1:5,6:15:3.01:238,3,0	0/0:16,0:16:29.88:0,30,572	0/0:31,0:31:75.26:0,75,1403	0/0:20,0:20:60.16:0,60,2230	0/1:24,0:24:64.09:64,0,1923	0/1:22,0:23:28.66:29,0,1319	0/0:9,0:9:0.03:0,0,711
chr10	38950505	.	G	GCGCG	1010.85	PASS	AB=0.944;AC=22;AF=0.407;AN=54;BaseQRankSum=6.847;DP=437;FS=3.253;HRun=0;HaplotypeScore=132.6117;InbreedingCoeff=0.4890;MQ=60.83;MQ0=0;MQRankSum=-6.387;QD=5.38;ReadPosRankSum=1.877;VQSLOD=1.9491;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:21,0:20:0.01:0,0,0	0/0:7,0:7:0:0,0,0	0/0:5,0:3:3.01:0,3,52	0/1:13,0:10:6.67:7,0,30	./.	0/1:14,0:14:17.46:17,0,90	0/1:21,0:21:15.21:15,0,118	0/0:18,0:18:8.75:0,9,144	1/1:8,0:8:3.01:52,3,0	1/1:10,0:10:18.06:334,18,0	0/1:6,0:6:0:0,0,0	0/0:19,0:19:44.07:0,44,308	1/1:12,0:11:18.84:108,19,0	1/1:12,0:12:14.58:82,15,0	1/1:10,0:10:3.01:51,3,0	1/1:10,0:10:3.01:52,3,0	1/1:24,0:23:18.05:283,18,0	0/1:8,7:16:13.72:129,0,14	0/0:25,0:24:39.12:0,39,571	0/0:13,0:13:24.06:0,24,379	0/0:35,0:35:90.18:0,90,1349	1/1:11,0:11:2.80:51,3,0	0/0:14,0:14:27.75:0,28,155	0/0:29,0:29:70.76:0,71,393	0/0:18,0:18:44.47:0,44,675	0/0:21,0:21:51.16:0,51,836	0/0:22,0:22:39.10:0,39,592	0/0:6,0:6:18.06:0,18,313
chr10	38951604	.	AAAAAAAAAAG	A	1677.43	PASS	AB=1.000;AC=22;AF=0.393;AN=56;BaseQRankSum=2.047;DP=400;FS=34.454;HRun=0;HaplotypeScore=132.9015;InbreedingCoeff=0.4627;MQ=51.49;MQ0=21;MQRankSum=-0.667;QD=8.51;ReadPosRankSum=-0.509;VQSLOD=1.0393;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:23:5.02:5,0,243	1/1:3,0:2:3.48:34,3,0	0/0:28,0:8:3.17:0,3,195	0/1:25,0:9:0.71:1,0,61	1/1:16,3:17:23.59:361,24,0	0/1:25,0:24:30.89:31,0,100	1/1:11,0:11:4.34:74,4,0	0/0:23,0:21:48.02:0,48,1350	1/1:7,1:8:20.08:245,20,0	0/1:21,0:18:32.06:106,0,32	0/1:12,0:11:20.71:47,0,21	0/0:14,0:14:37.67:0,38,1003	0/0:10,0:9:3.48:0,3,49	0/0:13,0:13:2.33:0,2,77	1/1:7,0:7:9.86:207,10,0	1/1:6,0:6:13.95:186,14,0	1/1:14,0:13:24.48:322,24,0	0/1:16,0:14:27.05:27,0,202	0/0:12,0:11:28.41:0,28,536	0/0:23,0:23:51.17:0,51,1502	0/0:6,0:6:14.75:0,15,332	1/1:7,0:7:14.98:219,15,0	0/0:6,0:6:15.01:0,15,349	0/0:13,0:11:25.64:0,26,862	0/0:12,0:11:21.41:0,21,682	0/0:12,0:11:31.30:0,31,570	0/0:13,0:13:34.19:0,34,1021	0/0:17,0:15:24.08:0,24,768
chr10	38951605	.	A	ACC	159.29	PASS	AB=0.913;AC=6;AF=0.107;AN=56;BaseQRankSum=3.161;DP=404;FS=47.348;HRun=0;HaplotypeScore=91.4042;InbreedingCoeff=-0.1314;MQ=53.02;MQ0=21;MQRankSum=-0.094;QD=2.10;ReadPosRankSum=-1.193;VQSLOD=-0.2288;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:54.42:0,54,760	0/1:3,0:2:6.49:6,0,17	0/0:28,0:8:0.35:0,0,116	0/1:25,0:10:5.66:6,0,23	0/1:16,1:17:97.71:98,0,327	0/0:25,0:24:62.85:0,63,778	0/0:11,0:11:19.64:0,20,203	0/0:23,0:21:58.05:0,58,800	0/0:8,0:8:10.28:0,10,166	0/0:21,0:18:39.38:0,39,455	0/0:12,0:11:17.54:0,18,212	0/0:14,0:14:42.14:0,42,604	0/0:10,0:9:9.03:0,9,139	0/0:13,0:13:20.94:0,21,278	0/0:7,0:7:1.69:0,2,189	0/1:6,1:7:17.28:17,0,150	0/1:14,0:13:73.28:73,0,156	0/0:16,0:14:38.93:0,39,496	0/0:13,0:12:32.46:0,32,402	0/0:23,0:23:53.16:0,53,692	0/0:6,0:6:14.99:0,15,177	0/1:4,2:7:74.29:74,0,106	0/0:6,0:6:15.05:0,15,202	0/0:13,0:11:33.08:0,33,480	0/0:12,0:11:29.12:0,29,397	0/0:12,0:11:33.04:0,33,454	0/0:14,0:13:36.09:0,36,456	0/0:17,0:15:41.50:0,42,583
chr10	38951610	.	AAAAG	A	1968.54	PASS	AB=0.983;AC=21;AF=0.375;AN=56;BaseQRankSum=2.441;DP=406;FS=0.000;HRun=0;HaplotypeScore=96.3954;InbreedingCoeff=0.1121;MQ=57.52;MQ0=20;MQRankSum=-1.874;QD=9.37;ReadPosRankSum=-0.514;VQSLOD=2.4225;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:22:80.30:248,0,80	0/1:4,0:3:7.59:28,0,8	0/0:31,0:10:8.72:0,9,106	0/0:28,0:12:10.08:0,10,106	0/1:22,0:20:18.87:180,0,19	1/1:23,1:23:37.94:423,38,0	1/1:12,0:12:10.32:134,10,0	0/0:20,0:18:47.03:0,47,577	0/1:7,0:7:6.78:61,0,7	1/1:20,1:18:41.77:375,42,0	1/1:12,0:11:16.47:130,16,0	0/0:14,0:14:10.59:0,11,349	0/1:10,0:9:22.86:23,0,29	0/1:13,0:13:11.07:49,0,11	1/1:6,1:7:2.64:62,3,0	0/1:7,1:8:8.57:71,0,9	0/1:12,1:12:0.90:123,0,1	0/1:16,0:14:25.53:180,0,26	0/1:13,0:12:13.97:14,0,167	0/0:24,0:24:49.43:0,49,685	0/0:8,0:8:0.25:0,0,119	0/1:6,0:6:33.27:40,0,33	0/0:5,0:5:14.88:0,15,163	0/0:12,0:10:5.24:0,5,345	0/0:13,0:12:12.98:0,13,364	0/0:13,0:12:1.81:0,2,171	0/0:14,0:13:28.59:0,29,457	0/0:14,0:13:8.12:0,8,233
chr10	38951611	.	AAAG	A	1716.14	PASS	AB=1.000;AC=26;AF=0.464;AN=56;BaseQRankSum=2.838;DP=405;FS=0.000;HRun=0;HaplotypeScore=90.9013;InbreedingCoeff=0.2042;MQ=57.52;MQ0=20;MQRankSum=-1.494;QD=7.46;ReadPosRankSum=-1.038;VQSLOD=2.5095;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:22:52.94:238,0,53	1/1:4,0:3:3.71:33,4,0	0/0:31,0:10:8.87:0,9,96	0/0:28,0:12:8.92:0,9,88	1/1:22,0:20:0.83:167,1,0	1/1:24,0:23:47.30:351,47,0	1/1:11,0:11:14.81:109,15,0	0/0:22,0:20:48.17:0,48,479	0/1:7,0:7:8.98:42,0,9	1/1:10,8:17:39.15:309,39,0	1/1:12,0:11:16.46:116,16,0	0/0:14,0:14:11.83:0,12,271	0/1:10,0:9:16.32:16,0,29	0/1:13,0:13:11.70:38,0,12	1/1:7,0:7:8.60:65,9,0	0/1:8,0:8:10.83:64,0,11	1/1:13,0:12:4.74:111,5,0	0/1:17,0:15:13.57:171,0,14	0/1:13,0:12:8.92:9,0,151	0/0:25,0:25:51.49:0,51,605	0/1:8,0:8:4.72:5,0,118	0/1:6,0:6:11.91:40,0,12	0/0:5,0:5:14.89:0,15,140	0/0:12,0:10:4.75:0,5,265	0/0:13,0:12:12.90:0,13,295	0/1:13,0:12:14.08:14,0,148	0/0:14,0:13:25.36:0,25,364	0/0:11,0:10:15.67:0,16,212
chr10	38951874	.	CTCT	C	2919.98	PASS	AC=18;AF=0.333;AN=54;BaseQRankSum=0.256;DP=337;FS=31.558;HRun=0;HaplotypeScore=50.2953;InbreedingCoeff=0.8349;MQ=33.98;MQ0=33;MQRankSum=-1.942;QD=27.81;ReadPosRankSum=0.378;VQSLOD=1.5310;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:24.04:0,24,468	0/0:2,0:2:3.01:0,3,67	0/0:5,0:1:1.55:0,2,4	0/0:6,0:1:0.47:0,0,1	0/0:14,0:11:12.04:0,12,271	0/0:15,0:15:9:0,9,156	0/0:13,0:12:24.08:0,24,498	1/1:5,15:15:33.08:505,33,0	0/0:17,0:17:29.99:0,30,578	0/0:14,0:11:30.10:0,30,677	0/0:17,0:17:15.02:0,15,291	1/1:1,8:8:18.06:299,18,0	0/0:5,0:5:8.70:0,9,203	0/0:13,0:13:18.06:0,18,383	0/0:17,0:17:24.08:0,24,537	0/0:9,0:9:15.05:0,15,321	0/0:15,0:12:20.77:0,21,473	0/0:22,0:16:15.05:0,15,311	1/1:3,9:10:24.06:372,24,0	1/1:0,16:16:36.12:597,36,0	1/1:0,7:5:8.74:148,9,0	0/0:4,0:4:9.03:0,9,185	1/1:0,5:5:6.02:100,6,0	./.	0/0:15,0:14:24.01:0,24,542	1/1:3,10:13:30.10:496,30,0	1/1:1,18:19:29.87:498,30,0	1/1:0,4:4:6.02:100,6,0
chr10	38952258	.	C	CT	2257.92	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=9.227;DP=470;FS=24.392;HRun=9;HaplotypeScore=82.5217;InbreedingCoeff=0.5600;MQ=68.41;MQ0=2;MQRankSum=-2.646;QD=12.47;ReadPosRankSum=-1.401;VQSLOD=1.1816;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:23:25.84:26,0,339	1/1:1,4:5:6.01:62,6,0	0/0:19,0:9:11.95:0,12,98	0/0:20,1:14:17.01:0,17,121	1/1:3,17:20:34.85:458,35,0	0/0:18,0:18:35.93:0,36,304	0/0:8,0:8:24:0,24,208	0/0:24,0:24:17.55:0,18,93	1/1:5,7:12:21.06:229,21,0	0/0:21,0:21:20.78:0,21,362	0/0:16,0:16:25.04:0,25,297	0/0:14,0:14:24.26:0,24,94	0/0:14,0:14:29.92:0,30,258	0/0:18,0:18:38.96:0,39,335	1/1:1,12:14:27.07:296,27,0	1/1:3,11:14:31.94:316,32,0	1/1:11,25:36:54.54:887,55,0	0/0:24,0:24:68.94:0,69,592	0/1:17,0:17:42.50:43,0,60	0/1:14,0:14:32.79:33,0,60	0/1:6,0:6:6.42:6,0,40	1/1:1,2:3:8.96:83,9,0	0/0:8,0:8:4.15:0,4,15	0/0:9,0:9:16.59:0,17,69	0/0:15,0:15:38.95:0,39,332	0/1:17,0:17:14.42:14,0,82	0/0:29,0:29:30.69:0,31,227	0/0:30,0:30:71.82:0,72,331
chr10	38952405	.	ACTT	A	4555.36	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=11.612;DP=545;FS=0.000;HRun=0;HaplotypeScore=74.8072;InbreedingCoeff=0.9522;MQ=56.94;MQ0=2;MQRankSum=0.943;QD=42.18;ReadPosRankSum=2.586;VQSLOD=6.1289;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:37:99:0,108,2450	1/1:0,6:6:9.03:154,9,0	0/0:17,0:1:3.01:0,3,71	0/0:22,0:7:15:0,15,304	1/1:1,8:8:21.03:326,21,0	0/0:15,0:15:42.14:0,42,969	0/0:25,0:25:75.26:0,75,1729	0/0:25,0:24:69.24:0,69,1593	1/1:0,19:19:51.17:870,51,0	0/0:18,0:17:51.18:0,51,1169	0/0:15,0:15:45.15:0,45,1037	0/0:14,0:14:42.14:0,42,969	0/0:6,0:6:18.06:0,18,408	0/0:12,0:12:30.09:0,30,650	1/1:0,14:14:39.13:664,39,0	1/1:0,9:9:27.09:460,27,0	1/1:1,38:39:96.33:1622,96,0	0/0:22,0:22:66.21:0,66,1433	0/0:14,0:11:33.10:0,33,717	0/0:19,0:19:57.20:0,57,1311	0/0:36,0:36:99:0,108,2490	1/1:1,11:12:27.09:459,27,0	0/0:8,0:8:24.08:0,24,554	0/0:33,0:33:96.33:0,96,2187	0/0:23,0:23:69.23:0,69,1530	0/0:21,0:21:60.21:0,60,1384	0/0:28,0:28:81.26:0,81,1781	0/0:26,0:26:78.27:0,78,1798
chr10	38953931	.	CTCTCTCTG	C	1146.58	PASS	AB=0.960;AC=25;AF=0.625;AN=40;BaseQRankSum=2.481;DP=460;FS=7.049;HRun=0;HaplotypeScore=168.7232;InbreedingCoeff=0.2484;MQ=65.18;MQ0=10;MQRankSum=-1.821;QD=4.80;ReadPosRankSum=-1.502;VQSLOD=1.9430;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:6,2:8:0:0,0,0	1/1:14,0:13:9.76:50,10,0	./.	./.	./.	1/1:16,10:25:3.01:73,3,0	1/1:14,0:14:3.01:70,3,0	./.	0/1:17,0:16:26.93:27,0,67	1/1:11,8:17:21.07:497,21,0	./.	1/1:13,0:12:2.39:31,2,0	1/1:10,4:13:12.04:257,12,0	1/1:8,3:10:3.01:41,3,0	./.	1/1:14,0:14:2.99:23,3,0	0/1:19,0:18:12.38:12,0,21	./.	1/1:18,0:18:3.01:36,3,0	0/0:19,0:19:3.45:0,3,23	0/0:8,0:6:0:0,0,0	0/1:15,0:15:0:0,0,0	./.	0/0:13,0:12:3:0,3,26	0/0:29,0:29:24.08:0,24,762	1/1:17,0:16:4.39:65,4,0	0/1:20,0:18:8.44:87,0,8	0/0:13,0:13:5.81:0,6,57
chr10	38953955	.	GTCT	G	1062.12	PASS	AB=0.855;AC=15;AF=0.268;AN=56;BaseQRankSum=3.655;DP=408;FS=9.349;HRun=0;HaplotypeScore=131.7006;InbreedingCoeff=0.4946;MQ=44.99;MQ0=20;MQRankSum=-3.274;QD=8.43;ReadPosRankSum=3.583;VQSLOD=2.7015;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:5:2.98:0,3,62	1/1:1,6:11:5.56:362,6,0	0/0:18,0:5:15.05:0,15,233	0/0:24,0:6:13.59:0,14,198	1/1:2,4:8:6.02:96,6,0	0/0:19,0:16:0.56:0,1,175	0/0:14,0:14:20.14:0,20,554	0/0:15,0:8:21.05:0,21,342	0/1:6,12:19:99:228,0,125	0/1:18,0:15:31.64:32,0,259	0/0:27,0:23:12.04:0,12,217	0/0:14,0:13:18.06:0,18,338	0/1:15,0:15:2.48:2,0,333	0/0:16,0:12:15.02:0,15,288	1/1:2,1:5:3.01:41,3,0	1/1:5,9:15:11.36:178,11,0	1/1:4,9:14:11.77:202,12,0	0/0:8,0:8:21.07:0,21,409	0/0:7,0:7:3.04:0,3,268	0/0:14,0:14:18.06:0,18,347	0/0:8,0:6:9.03:0,9,179	1/1:3,11:16:5.99:83,6,0	0/0:16,0:13:3.01:0,3,62	0/0:14,0:13:8.73:0,9,179	0/0:23,0:23:63.21:0,63,1373	0/0:13,0:12:35.84:0,36,546	0/0:17,0:15:33.10:0,33,557	0/0:9,0:8:15.05:0,15,287
chr10	38953963	.	GTCT	G	1521.25	PASS	AB=0.819;AC=15;AF=0.288;AN=52;BaseQRankSum=2.316;DP=440;FS=5.933;HRun=0;HaplotypeScore=135.0905;InbreedingCoeff=0.0459;MQ=41.26;MQ0=28;MQRankSum=-1.496;QD=8.31;ReadPosRankSum=3.143;VQSLOD=2.3315;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:5,1:5:2.98:0,3,48	0/0:12,0:11:20.64:0,21,140	0/1:28,0:6:1.93:2,0,130	0/0:38,0:9:15.88:0,16,185	./.	0/0:22,0:19:0.56:0,1,130	0/0:14,0:14:17.12:0,17,484	0/1:8,6:7:86.90:98,0,87	0/0:19,0:18:18.29:0,18,254	0/1:18,0:15:29.16:29,0,297	0/0:25,0:21:6.02:0,6,133	0/1:9,4:16:25.87:182,0,26	0/1:16,0:15:5.41:5,0,254	0/0:16,0:12:15.02:0,15,288	0/0:7,0:6:3:0,3,25	0/0:15,0:15:13.57:0,14,88	0/0:13,0:12:10.58:0,11,118	0/0:7,0:7:18.06:0,18,322	0/1:2,2:4:49.29:96,0,49	1/1:5,7:17:18.06:309,18,0	1/1:2,2:7:6.02:103,6,0	0/0:18,0:18:2.99:0,3,24	./.	1/1:6,3:15:8.92:154,9,0	0/0:18,0:18:48.16:0,48,1094	0/1:9,4:14:99:306,0,214	0/1:4,6:15:13.60:335,0,14	0/1:6,2:8:55.33:55,0,99
chr10	38953967	.	CTCTG	C	912.58	PASS	AB=0.963;AC=24;AF=0.444;AN=54;BaseQRankSum=6.376;DP=462;FS=13.849;HRun=0;HaplotypeScore=147.5987;InbreedingCoeff=-0.0409;MQ=39.91;MQ0=33;MQRankSum=-2.413;QD=3.36;ReadPosRankSum=4.201;VQSLOD=1.8795;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:5,0:4:0:0,0,0	1/1:8,4:11:15.07:216,15,0	0/1:30,0:6:16.86:17,0,25	0/0:44,0:8:0.19:0,0,10	./.	1/1:22,0:19:2.97:20,3,0	0/0:14,0:14:6.70:0,7,342	0/0:19,0:11:29.73:0,30,373	0/1:16,4:19:99:127,0,127	0/1:19,0:16:84.83:85,0,227	0/0:27,0:23:6.01:0,6,85	0/1:18,0:17:21.38:54,0,21	0/1:16,0:15:33.14:33,0,190	0/0:16,0:12:14.84:0,15,228	1/1:8,0:7:3.01:42,3,0	0/1:10,6:16:51.13:61,0,51	1/1:10,2:12:8.97:82,9,0	0/0:6,0:6:8.92:0,9,122	0/1:7,0:7:37.87:38,0,131	0/1:19,0:17:10.82:50,0,11	1/1:9,0:7:5.90:43,6,0	1/1:12,4:16:3.01:42,3,0	0/0:20,0:17:0:0,0,0	0/0:16,0:15:7.49:0,7,27	0/0:17,0:17:45.12:0,45,999	0/1:16,0:14:63.57:64,0,295	0/1:15,0:13:22.72:87,0,23	0/1:11,0:10:10.35:10,0,108
chr10	38953971	.	GTC	G	503.44	PASS	AB=0.926;AC=22;AF=0.407;AN=54;BaseQRankSum=6.664;DP=488;FS=19.334;HRun=0;HaplotypeScore=150.3966;InbreedingCoeff=0.0358;MQ=36.58;MQ0=33;MQRankSum=-3.383;QD=1.79;ReadPosRankSum=4.141;VQSLOD=1.1300;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/1:13,0:12:0.66:4,0,1	0/1:38,0:7:6.51:7,0,127	0/0:56,0:9:10.51:0,11,79	0/1:10,0:10:0:0,0,0	1/1:24,0:21:2:7,2,0	0/0:12,0:12:18.03:0,18,262	0/0:18,0:11:30.10:0,30,494	0/1:19,0:19:17.20:17,0,68	0/1:19,0:16:10.41:10,0,183	0/0:27,0:23:3.01:0,3,53	0/1:15,3:17:35.47:119,0,35	0/0:15,0:14:2.45:0,2,203	0/0:15,0:11:12.02:0,12,163	1/1:9,0:8:2.74:12,3,0	0/0:18,0:18:4.87:0,5,41	0/1:22,0:21:11.91:28,0,12	0/0:4,0:4:9.01:0,9,109	0/1:7,2:9:44.86:45,0,261	1/1:11,6:15:10.73:105,11,0	1/1:8,1:7:6.01:67,6,0	0/1:16,0:16:0:0,0,0	0/0:13,4:15:0:0,0,0	1/1:11,3:13:1.55:4,2,0	0/0:18,0:18:39.13:0,39,683	0/1:14,3:15:87.67:88,0,361	0/1:8,5:12:31.73:100,0,32	0/1:10,1:10:34.43:34,0,94
chr10	38953975	.	C	CTG	609.60	PASS	AB=0.942;AC=16;AF=0.296;AN=54;BaseQRankSum=6.554;DP=489;FS=27.872;HRun=0;HaplotypeScore=152.0106;InbreedingCoeff=0.0258;MQ=39.49;MQ0=32;MQRankSum=-3.399;QD=3.24;ReadPosRankSum=1.680;VQSLOD=1.1981;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:5:0:0,0,0	1/1:9,0:8:2.26:85,2,0	0/0:45,0:11:5.09:0,5,155	0/0:65,0:10:15.76:0,16,92	0/0:10,0:10:0:0,0,0	0/0:24,0:21:2.64:0,3,21	0/0:11,0:11:21.04:0,21,277	0/0:21,0:14:39.11:0,39,539	0/1:18,0:17:9.82:10,0,45	0/0:19,0:16:41.72:0,42,407	0/0:26,0:22:3.01:0,3,46	0/1:15,2:16:30.01:128,0,30	0/0:15,0:14:16.15:0,16,248	0/0:15,0:11:12.03:0,12,183	0/0:9,0:8:2.74:0,3,12	0/1:18,0:18:4.38:4,0,24	0/1:20,0:19:22.07:22,0,51	0/0:4,0:4:8.98:0,9,108	0/1:10,0:10:22.37:22,0,283	1/1:16,1:15:11.82:124,12,0	0/1:9,2:9:14.50:31,0,15	./.	0/1:14,3:16:0:0,0,0	1/1:13,0:12:3.01:36,3,0	0/0:16,0:16:39.13:0,39,593	0/1:17,0:16:92.50:92,0,332	0/1:10,1:11:25.11:148,0,25	0/1:9,1:10:49.82:50,0,81
chr10	38953979	.	GTCT	G	382.16	PASS	AB=0.769;AC=18;AF=0.321;AN=56;BaseQRankSum=5.302;DP=503;FS=9.559;HRun=0;HaplotypeScore=153.1780;InbreedingCoeff=-0.0470;MQ=40.35;MQ0=35;MQRankSum=-3.256;QD=1.17;ReadPosRankSum=3.526;VQSLOD=2.0426;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:5,1:5:0:0,0,0	0/1:3,1:8:1.83:2,0,60	0/1:57,0:17:27.35:27,0,505	0/1:74,0:13:3.91:4,0,129	0/0:3,5:10:0:0,0,0	1/1:24,0:21:1.84:10,2,0	0/0:12,0:12:8.11:0,8,333	0/0:19,0:15:45.15:0,45,1008	0/0:9,4:16:0.84:0,1,175	0/1:18,1:16:73.81:74,0,250	0/0:21,5:22:6.02:0,6,133	0/1:8,5:16:3.59:4,0,68	0/1:14,1:14:32.90:33,0,204	0/0:13,1:10:9:0,9,164	1/1:2,6:7:2.97:21,3,0	0/1:5,6:17:1.80:117,0,2	0/0:13,5:19:20.16:0,20,209	0/0:4,0:4:9.02:0,9,106	0/1:8,2:11:29.72:30,0,415	0/0:9,2:15:9.39:0,9,44	0/0:10,0:9:5.79:0,6,136	0/1:3,7:14:0:0,0,0	0/1:8,4:16:0:0,0,0	0/0:8,0:10:2.65:0,3,18	0/0:14,1:15:36.11:0,36,821	0/1:13,2:17:61.57:62,0,621	0/1:4,1:11:6.88:7,0,96	0/1:6,4:10:99:123,0,153
chr10	38954016	.	CTG	C	276.45	PASS	AB=0.954;AC=10;AF=0.185;AN=54;BaseQRankSum=4.671;DP=563;FS=5.184;HRun=0;HaplotypeScore=155.5531;InbreedingCoeff=0.0027;MQ=40.49;MQ0=32;MQRankSum=-0.419;QD=1.86;ReadPosRankSum=-1.485;VQSLOD=2.3492;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/1:8,0:8:13.65:14,0,36	0/0:46,0:8:5.18:0,5,153	0/0:52,0:12:3.24:0,3,85	0/1:22,0:22:2.88:3,0,26	0/1:28,0:24:12.35:15,0,12	0/1:16,0:16:8.21:8,0,116	0/0:57,0:52:99:0,126,2396	0/0:12,0:12:4.90:0,5,234	0/1:13,0:12:79.57:80,0,136	0/0:26,0:21:2.99:0,3,23	0/1:15,5:19:35.39:35,0,52	0/0:13,0:13:1.74:0,2,67	0/0:16,0:12:7.70:0,8,34	0/0:15,0:15:17.39:0,17,108	0/1:19,0:19:2.02:2,0,173	0/0:22,0:21:19.19:0,19,245	0/1:4,1:5:33.27:66,0,33	0/0:21,0:18:47.98:0,48,732	0/0:20,0:18:15.05:0,15,241	0/0:21,0:20:30.08:0,30,470	0/0:14,0:14:6.66:0,7,21	0/0:14,1:14:0:0,0,0	1/1:12,6:17:14.99:186,15,0	0/0:12,0:11:20.95:0,21,313	0/0:24,0:21:59.65:0,60,980	0/0:8,0:8:14.61:0,15,186	0/0:9,0:9:18.06:0,18,260
chr10	38954018	.	G	GTC	383.59	PASS	AB=0.951;AC=12;AF=0.222;AN=54;BaseQRankSum=5.163;DP=550;FS=0.862;HRun=0;HaplotypeScore=149.3959;InbreedingCoeff=0.3191;MQ=41.15;MQ0=30;MQRankSum=-2.241;QD=2.52;ReadPosRankSum=0.455;VQSLOD=1.9758;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:7,0:7:9.78:0,10,58	0/0:43,0:8:8.80:0,9,72	0/0:50,0:13:7.99:0,8,64	0/0:22,0:22:10.41:0,10,72	1/1:25,4:25:2.96:21,3,0	1/1:16,1:17:5.05:72,5,0	0/0:54,1:50:99:0,128,1743	0/0:11,0:11:3.47:0,3,152	0/1:14,0:13:21.48:143,0,21	1/1:25,0:20:3:26,3,0	0/0:19,1:19:6.29:0,6,50	0/1:12,2:14:4.80:129,0,5	0/1:16,0:12:11.97:58,0,12	0/0:16,0:16:19.08:0,19,103	0/0:18,0:18:11.85:0,12,105	0/0:20,0:20:15.26:0,15,147	0/1:5,0:5:19.23:19,0,38	0/0:21,0:18:44.10:0,44,552	0/0:20,0:18:15.05:0,15,203	0/0:20,0:19:30.09:0,30,387	0/0:13,0:13:7.98:0,8,32	0/1:13,1:13:0:0,0,0	0/1:16,1:17:0.28:54,0,0	0/0:11,0:10:15.04:0,15,188	0/0:24,0:21:45.12:0,45,691	0/0:9,0:9:15.02:0,15,176	0/0:9,0:9:8.81:0,9,123
chr10	38954020	.	CTCTG	C	516.68	PASS	AB=0.958;AC=16;AF=0.286;AN=56;BaseQRankSum=2.963;DP=550;FS=4.091;HRun=0;HaplotypeScore=156.6532;InbreedingCoeff=0.0599;MQ=41.98;MQ0=29;MQRankSum=-1.581;QD=2.36;ReadPosRankSum=-2.306;VQSLOD=2.1408;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:9,0:7:0:0,0,0	0/0:7,0:7:8.50:0,9,43	0/0:37,1:7:8.80:0,9,72	0/0:46,0:12:9.44:0,9,72	0/1:23,0:23:15.61:37,0,16	1/1:22,7:25:2.03:20,2,0	1/1:17,2:19:5.63:91,6,0	0/0:56,0:51:99:0,123,1783	0/1:11,0:11:40.58:41,0,243	0/1:12,2:13:63.12:153,0,63	1/1:21,5:21:2.60:26,3,0	0/1:21,0:20:1.74:2,0,51	0/1:11,2:13:21.13:101,0,21	0/1:13,3:12:12.10:105,0,12	0/1:16,0:16:29.45:29,0,69	0/0:19,0:19:1.91:0,2,111	0/0:20,0:20:14.07:0,14,231	0/1:5,0:5:24.84:25,0,44	0/0:21,0:18:53.95:0,54,751	0/0:20,0:18:16.65:0,17,124	0/0:22,0:21:27.19:0,27,346	0/0:13,0:13:3.02:0,3,8	0/0:13,0:12:0:0,0,0	0/1:17,0:16:9.57:34,0,10	0/0:11,0:10:18.05:0,18,295	0/0:26,0:22:60.19:0,60,1103	0/0:9,0:9:14.03:0,14,111	0/0:9,0:9:17.73:0,18,258
chr10	38954022	.	CTG	C	1599.68	PASS	AB=0.908;AC=29;AF=0.518;AN=56;BaseQRankSum=5.864;DP=532;FS=0.532;HRun=0;HaplotypeScore=137.5940;InbreedingCoeff=0.0573;MQ=39.72;MQ0=27;MQRankSum=3.059;QD=4.66;ReadPosRankSum=-1.496;VQSLOD=2.5133;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,0:7:3:25,3,0	1/1:5,2:7:9.03:144,9,0	0/0:33,0:5:8.96:0,9,78	0/1:36,1:11:9.65:10,0,19	1/1:14,9:23:12.78:306,13,0	1/1:28,0:24:2.15:20,2,0	1/1:18,0:18:10.88:71,11,0	0/0:57,0:52:53.59:0,54,1526	0/1:10,2:12:62.68:63,0,189	0/1:12,0:11:50.72:59,0,51	1/1:24,0:19:5.60:50,6,0	0/1:20,0:19:42.49:58,0,42	0/1:12,0:12:18.22:18,0,25	1/1:16,0:12:2:29,2,0	0/1:8,8:16:18.52:236,0,19	0/1:11,8:19:64.93:174,0,65	0/1:16,4:20:99:117,0,131	0/1:5,0:5:35.92:65,0,36	0/0:21,0:18:31:0,31,624	0/0:20,0:18:9.51:0,10,88	0/1:24,0:23:5.80:6,0,228	1/1:8,5:13:8.96:128,9,0	0/0:13,0:12:0:0,0,0	1/1:17,0:16:14.99:184,15,0	0/0:10,0:9:18.05:0,18,302	0/0:26,0:22:21.71:0,22,617	0/1:9,0:9:6.45:6,0,54	0/0:9,0:9:0.64:0,1,105
chr10	38954024	.	G	GTCTC	2430.10	PASS	AB=0.962;AC=34;AF=0.607;AN=56;BaseQRankSum=5.736;DP=525;FS=4.187;HRun=0;HaplotypeScore=141.0110;InbreedingCoeff=-0.2086;MQ=40.27;MQ0=25;MQRankSum=2.012;QD=5.72;ReadPosRankSum=0.439;VQSLOD=2.4255;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:9,0:7:3:25,3,0	1/1:5,2:7:14.01:201,14,0	0/0:33,0:6:2.97:0,3,20	0/1:34,0:11:12:12,0,44	1/1:20,2:23:12.61:311,13,0	1/1:21,0:19:2.72:21,3,0	1/1:16,0:17:9.85:85,10,0	0/0:56,0:52:30.09:0,30,797	0/1:10,1:12:68.01:68,0,106	0/1:11,0:10:29.96:121,0,30	1/1:23,0:18:3.47:26,3,0	0/1:20,0:19:26.21:57,0,26	0/1:9,0:11:1.63:182,0,2	0/1:14,0:10:14.91:55,0,15	1/1:15,2:17:0.69:332,1,0	0/1:16,2:19:4.88:266,0,5	0/1:15,4:19:80.50:209,0,80	0/1:5,0:5:22.27:22,0,43	0/1:23,0:20:26.38:26,0,218	0/1:21,0:19:8.58:9,0,30	0/1:23,0:22:28.88:29,0,161	1/1:12,2:14:9.03:129,9,0	0/1:13,0:12:0:0,0,0	1/1:19,0:18:18.02:234,18,0	0/0:9,0:8:14.98:0,15,247	0/1:27,0:23:99:101,0,289	0/1:9,0:9:6.45:6,0,34	0/1:10,0:10:61.87:62,0,62
chr10	38954028	.	CTG	C	3971.58	PASS	AB=0.904;AC=39;AF=0.696;AN=56;BaseQRankSum=3.032;DP=526;FS=1.059;HRun=0;HaplotypeScore=124.8278;InbreedingCoeff=-0.1857;MQ=43.66;MQ0=24;MQRankSum=4.214;QD=7.86;ReadPosRankSum=0.306;VQSLOD=3.5199;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,0:7:2.99:24,3,0	1/1:7,0:7:10.96:152,11,0	0/1:30,0:6:2.02:2,0,64	0/1:31,0:8:6.39:6,0,30	1/1:24,0:24:16.61:332,17,0	1/1:25,0:21:8.08:62,8,0	1/1:18,0:18:12.93:92,13,0	0/1:33,21:49:99:655,0,312	0/1:13,0:13:56.27:63,0,56	0/1:11,0:10:26.93:50,0,27	1/1:23,0:18:2.60:26,3,0	0/1:20,0:19:6.10:72,0,6	0/1:11,0:11:27.11:27,0,31	1/1:14,0:10:0.62:10,1,0	1/1:18,0:18:15.61:275,16,0	1/1:19,0:19:10.43:210,10,0	0/1:19,0:19:29.01:115,0,29	0/1:6,0:6:31.05:56,0,31	0/1:19,5:21:99:100,0,160	1/1:9,15:22:8.01:221,8,0	0/1:15,8:22:54.54:352,0,55	1/1:14,0:14:8.96:128,9,0	0/0:12,0:11:0:0,0,0	1/1:21,0:20:18.87:204,19,0	0/0:9,0:8:18.04:0,18,298	0/1:24,3:23:99:373,0,242	1/1:1,8:9:1.99:215,2,0	0/1:3,7:10:39.68:149,0,40
chr10	38954030	.	G	GTCTC	5148.50	PASS	AB=1.000;AC=46;AF=0.821;AN=56;BaseQRankSum=-0.805;DP=517;FS=2.151;HRun=0;HaplotypeScore=133.0652;InbreedingCoeff=0.4472;MQ=42.77;MQ0=22;MQRankSum=-0.647;QD=11.00;ReadPosRankSum=0.404;VQSLOD=4.4783;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:10,0:8:2.89:24,3,0	1/1:7,0:7:14.99:204,15,0	0/0:26,0:4:7.79:0,8,73	0/1:27,0:7:3.23:3,0,31	1/1:24,0:24:16.41:336,16,0	1/1:24,0:22:8.65:63,9,0	1/1:17,0:17:10.33:77,10,0	1/1:54,0:49:39.31:765,39,0	1/1:12,0:12:8.99:89,9,0	1/1:10,0:9:10.84:63,11,0	1/1:23,0:18:3.47:27,3,0	1/1:20,0:19:5.76:66,6,0	0/1:11,0:11:12.19:134,0,12	0/0:14,0:10:3.35:0,3,25	1/1:17,0:17:24.05:359,24,0	1/1:19,0:19:24:336,24,0	1/1:20,0:20:12.04:228,12,0	0/1:6,0:6:26.59:27,0,41	1/1:24,0:22:20.69:249,21,0	1/1:23,0:23:17.79:263,18,0	1/1:20,0:21:14.05:400,14,0	1/1:15,0:15:12.03:154,12,0	0/1:11,0:10:0:0,0,0	1/1:21,0:20:18.91:233,19,0	0/0:9,0:8:17.97:0,18,256	1/1:16,10:23:38.83:590,39,0	1/1:10,0:10:17.97:234,18,0	1/1:10,0:10:12.04:225,12,0
chr10	38954200	.	C	CTGTTTGTTTGTT	13581.71	PASS	AB=0.806;AC=32;AF=0.571;AN=56;BaseQRankSum=3.280;DP=619;FS=3.701;HRun=0;HaplotypeScore=201.0541;InbreedingCoeff=0.8487;MQ=62.81;MQ0=3;MQRankSum=-12.118;QD=37.94;ReadPosRankSum=-5.105;VQSLOD=3.5369;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:30:42.14:1155,42,0	0/0:10,0:10:18.04:0,18,518	0/1:24,0:18:0.80:1,0,369	0/0:25,0:24:27.09:0,27,747	0/0:24,0:24:51.13:0,51,1430	1/1:8,0:18:33.11:871,33,0	1/1:8,0:23:30.10:816,30,0	1/1:35,0:32:50.98:1488,51,0	0/0:22,0:22:39.12:0,39,1221	1/1:18,0:20:36.05:822,36,0	1/1:9,0:23:42.10:1037,42,0	0/1:7,0:19:60.59:61,0,109	1/1:9,0:15:21.04:480,21,0	1/1:8,0:13:9.03:243,9,0	0/0:28,0:28:66.20:0,66,2104	0/0:20,0:20:33.09:0,33,960	0/0:36,0:36:84.29:0,84,2641	1/1:7,0:11:12.01:340,12,0	1/1:19,0:28:45.07:1528,45,0	1/1:6,0:17:17.99:784,18,0	1/1:12,0:12:9.03:451,9,0	0/0:15,0:16:28.34:0,28,908	0/0:6,0:19:9.49:0,9,27	0/0:10,0:39:31.16:0,31,277	0/0:21,0:21:42.13:0,42,1288	1/1:14,10:24:45.49:1813,45,0	1/1:15,0:25:23.80:1164,24,0	1/1:4,14:18:9.03:529,9,0
chr10	38954603	.	GACACAC	G	46.49	PASS	AC=6;AF=0.115;AN=52;BaseQRankSum=0.925;DP=510;FS=0.000;HRun=0;HaplotypeScore=113.2502;InbreedingCoeff=0.4318;MQ=66.80;MQ0=14;MQRankSum=-3.162;QD=0.95;ReadPosRankSum=-1.701;VQSLOD=1.9447;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:42.10:0,42,960	0/0:7,0:7:3.01:0,3,85	./.	./.	0/0:15,0:15:5.14:0,5,66	0/0:13,0:11:6.02:0,6,137	0/0:33,0:32:29.95:0,30,706	0/0:18,0:18:0.89:0,1,2	0/0:14,0:14:12.01:0,12,257	0/0:23,0:21:15.05:0,15,404	0/0:5,0:7:3.01:0,3,78	1/1:12,0:11:3.01:32,3,0	0/0:11,0:11:3.01:0,3,67	0/0:17,0:16:18.03:0,18,394	0/0:20,0:18:9.03:0,9,233	0/0:13,0:12:12.01:0,12,234	0/0:19,0:20:24.04:0,24,494	0/0:16,0:17:31.66:0,32,718	0/0:13,0:12:15.05:0,15,381	0/0:10,0:10:3.48:0,3,64	0/0:40,0:38:27.05:0,27,556	0/0:10,0:11:8.96:0,9,156	1/1:9,3:13:2.39:59,2,0	1/1:20,4:24:2.69:60,3,0	0/0:14,0:13:9.03:0,9,238	0/0:22,0:22:21.07:0,21,555	0/0:8,0:8:3.48:0,3,67	0/0:15,0:15:19.52:0,20,273
chr10	38954657	.	C	CAG	1569.36	PASS	AB=0.854;AC=15;AF=0.268;AN=56;BaseQRankSum=5.440;DP=526;FS=0.949;HRun=0;HaplotypeScore=95.1174;InbreedingCoeff=0.6656;MQ=61.39;MQ0=15;MQRankSum=0.487;QD=11.62;ReadPosRankSum=-0.359;VQSLOD=2.8165;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:7.92:0,8,312	1/1:5,0:5:4.54:68,5,0	0/0:27,0:19:41.17:0,41,422	0/0:28,0:17:17.90:0,18,337	1/1:17,0:17:35.91:288,36,0	0/0:20,0:19:35.91:0,36,294	0/0:32,0:32:63.23:0,63,533	0/0:14,0:14:38.87:0,39,323	1/1:21,0:21:48.03:453,48,0	0/0:11,0:11:14.95:0,15,141	0/0:6,0:6:11.31:0,11,99	0/0:9,0:9:20.01:0,20,153	0/0:11,0:11:23.95:0,24,193	0/0:17,0:17:7.37:0,7,174	1/1:19,0:18:33.20:330,33,0	0/1:4,14:18:3.17:50,0,3	1/1:17,0:16:7.21:185,7,0	0/1:17,0:17:39.60:40,0,88	0/0:21,0:21:56.12:0,56,472	0/0:8,0:8:9.99:0,10,95	0/0:49,0:47:56.51:0,57,467	1/1:12,0:12:35.90:317,36,0	0/0:18,0:17:35.91:0,36,291	0/0:35,0:35:74.28:0,74,583	0/0:18,0:17:29.18:0,29,229	0/0:24,0:23:8.30:0,8,311	0/0:11,0:11:16:0,16,159	0/1:9,0:9:22.67:23,0,35
chr10	38954925	.	G	GTATT	4552.16	PASS	AC=34;AF=0.630;AN=54;BaseQRankSum=-4.138;DP=423;FS=3.370;HRun=0;HaplotypeScore=63.1065;InbreedingCoeff=0.7792;MQ=59.72;MQ0=1;MQRankSum=-2.739;QD=21.07;ReadPosRankSum=4.361;VQSLOD=4.1284;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,0:17:4.26:55,4,0	1/1:3,10:13:18.06:449,18,0	0/0:10,0:9:5.16:0,5,116	0/0:8,0:6:11.87:0,12,135	1/1:8,16:24:42.06:879,42,0	1/1:4,0:22:9.03:151,9,0	./.	0/0:37,0:36:72.19:0,72,1047	1/1:6,5:11:6.02:149,6,0	1/1:5,0:13:11.96:150,12,0	1/1:2,0:7:3.01:52,3,0	1/1:1,7:8:9.03:225,9,0	1/1:1,0:8:3.01:52,3,0	1/1:3,0:10:3.01:53,3,0	1/1:4,9:13:6.02:150,6,0	1/1:2,7:9:12.04:300,12,0	1/1:3,22:24:42.14:1048,42,0	1/1:3,0:22:12.04:205,12,0	0/0:23,0:22:42.09:0,42,581	0/0:20,0:20:51.13:0,51,779	0/0:9,0:9:15.02:0,15,199	1/1:1,0:1:3.01:37,3,0	1/1:2,5:8:15.05:374,15,0	1/1:0,4:5:9.03:225,9,0	0/0:22,0:22:48.15:0,48,788	0/0:30,0:30:41.21:0,41,1016	0/0:20,0:20:48.13:0,48,752	0/0:22,0:22:57.14:0,57,884
chr10	38955049	.	AAC	A	5271.63	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=9.107;DP=673;FS=2.737;HRun=0;HaplotypeScore=90.5993;InbreedingCoeff=0.9761;MQ=64.44;MQ0=5;MQRankSum=0.250;QD=23.53;ReadPosRankSum=4.088;VQSLOD=5.5596;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,126,1970	1/1:2,7:9:18.06:222,18,0	0/0:41,0:26:26.96:0,27,716	0/0:43,0:30:55.93:0,56,756	1/1:5,20:24:45.14:554,45,0	0/0:21,0:21:45.14:0,45,709	0/0:25,0:25:54.16:0,54,850	0/0:17,0:16:33.11:0,33,538	1/1:2,13:15:30.09:369,30,0	0/0:17,2:18:8.21:0,8,648	0/0:6,0:6:18.06:0,18,294	1/1:6,17:23:33.10:406,33,0	0/0:16,0:16:42.13:0,42,660	0/0:14,0:14:30.10:0,30,489	1/1:3,20:23:51.16:628,51,0	1/1:4,10:14:27.08:332,27,0	1/1:4,44:46:96.30:1182,96,0	0/0:19,0:19:47.75:0,48,744	0/0:18,0:17:29.67:0,30,489	0/0:18,0:18:42.14:0,42,681	0/0:50,1:51:95.54:0,96,2062	1/1:4,11:15:21.07:259,21,0	1/1:3,13:16:30.09:369,30,0	1/1:1,33:35:80.92:951,81,0	0/0:21,0:21:45.15:0,45,733	0/0:29,0:30:72.23:0,72,1128	0/0:21,0:20:8.23:0,8,623	0/0:16,0:15:42.12:0,42,653
chr10	38956946	.	GTTTTTTGTTTT	G	4325.79	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-4.290;DP=429;FS=3.657;HRun=0;HaplotypeScore=152.7880;InbreedingCoeff=0.8516;MQ=61.28;MQ0=9;MQRankSum=-7.154;QD=41.20;ReadPosRankSum=2.766;VQSLOD=4.7404;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:37:84.59:0,85,2886	1/1:1,3:4:9.03:304,9,0	0/0:20,0:8:17.84:0,18,363	0/0:30,0:18:30.97:0,31,1127	1/1:5,12:16:30.10:833,30,0	0/0:11,0:11:33.08:0,33,1028	0/0:13,0:14:34.34:0,34,1176	0/0:20,0:21:43.71:0,44,923	1/1:1,10:11:24.08:810,24,0	0/0:18,0:16:36.58:0,37,1194	0/0:11,0:11:22.09:0,22,492	1/1:3,11:14:21.07:709,21,0	0/0:11,0:11:2.45:0,2,756	0/0:9,0:9:27.08:0,27,891	1/1:1,5:6:9.03:304,9,0	1/1:3,4:7:9.03:304,9,0	1/1:6,11:17:12.01:326,12,0	0/0:20,0:20:0.69:0,1,1002	0/0:24,0:24:20.63:0,21,1190	0/0:9,0:9:13.41:0,13,320	0/0:18,0:17:24.08:0,24,680	1/1:0,2:2:6.02:202,6,0	1/1:3,6:9:12.04:338,12,0	1/1:9,9:18:3.18:197,3,0	0/0:12,0:12:36.12:0,36,1702	0/0:21,0:21:60.21:0,60,2001	0/0:21,0:21:21.17:0,21,586	0/0:13,0:13:24.08:0,24,726
chr10	38956950	.	TTTG	T	3821.17	PASS	AB=1.000;AC=42;AF=0.750;AN=56;BaseQRankSum=-0.934;DP=422;FS=16.100;HRun=0;HaplotypeScore=100.8350;InbreedingCoeff=0.1827;MQ=64.33;MQ0=9;MQRankSum=-1.335;QD=10.92;ReadPosRankSum=-0.165;VQSLOD=2.1859;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:36,0:36:64.87:65,0,386	1/1:4,0:4:9.02:92,9,0	0/0:22,0:9:14.26:0,14,157	0/0:38,0:24:43.92:0,44,507	1/1:17,0:16:29.24:230,29,0	0/1:13,0:13:37.31:37,0,88	0/1:12,0:12:30.39:30,0,127	1/1:21,2:23:54.49:492,54,0	1/1:11,0:11:24.05:247,24,0	0/1:18,0:16:60.12:140,0,60	0/1:10,0:10:20.09:73,0,20	1/1:13,0:13:21.05:216,21,0	0/1:12,0:12:12.27:94,0,12	0/1:9,0:9:32.69:33,0,112	1/1:6,0:6:9.02:92,9,0	1/1:7,0:7:9.02:93,9,0	1/1:14,0:14:12:114,12,0	0/1:20,0:20:16:151,0,16	1/1:21,2:23:48.29:362,48,0	1/1:7,0:7:17.89:156,18,0	1/1:17,0:16:18.16:106,18,0	1/1:2,0:2:6.01:61,6,0	1/1:8,0:8:11.80:86,12,0	1/1:15,0:15:4.79:59,5,0	0/0:12,0:12:36.08:0,36,613	1/1:20,0:20:19.74:307,20,0	1/1:16,3:19:21.28:255,21,0	1/1:12,2:14:22.10:229,22,0
chr10	38956951	.	TTG	T	4996.47	PASS	AB=0.985;AC=45;AF=0.804;AN=56;BaseQRankSum=-0.948;DP=410;FS=10.228;HRun=0;HaplotypeScore=88.9039;InbreedingCoeff=0.3858;MQ=64.50;MQ0=9;MQRankSum=-1.499;QD=14.78;ReadPosRankSum=-0.407;VQSLOD=4.0784;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:34,0:34:99:124,0,121	1/1:4,0:4:8.99:75,9,0	0/0:22,0:9:13.87:0,14,155	0/0:38,0:24:25.08:0,25,399	1/1:15,0:14:28.58:212,29,0	0/1:13,0:13:11.45:165,0,11	0/1:11,1:12:33.67:88,0,34	1/1:16,5:21:55.21:559,55,0	1/1:11,0:11:23.97:200,24,0	0/1:17,0:15:1.64:203,0,2	1/1:10,0:10:10.16:123,10,0	1/1:13,0:13:20.98:175,21,0	1/1:12,0:12:23.95:159,24,0	0/1:9,0:9:38.23:44,0,38	1/1:6,0:6:8.99:75,9,0	1/1:7,0:7:8.99:75,9,0	1/1:12,1:13:11.97:97,12,0	1/1:19,1:20:18.48:299,18,0	1/1:5,16:21:56.93:578,57,0	1/1:1,6:7:17.94:164,18,0	1/1:3,13:15:23.90:279,24,0	1/1:2,0:2:5.99:50,6,0	1/1:8,0:8:11.77:77,12,0	1/1:15,0:15:4.79:47,5,0	0/0:12,0:12:35.78:0,36,491	1/1:6,14:20:49.47:580,49,0	1/1:4,15:19:21.06:259,21,0	1/1:4,9:13:24:290,24,0
chr10	38956952	.	TG	T	5286.17	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=0.521;DP=388;FS=8.924;HRun=1;HaplotypeScore=79.1529;InbreedingCoeff=0.8344;MQ=65.68;MQ0=9;MQRankSum=-0.391;QD=16.68;ReadPosRankSum=1.347;VQSLOD=4.4012;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:32,1:33:59.84:385,60,0	1/1:3,0:3:8.87:58,9,0	0/0:22,0:9:13.87:0,14,115	0/0:36,1:24:20.06:0,20,271	1/1:14,0:13:27.03:178,27,0	1/1:11,2:13:32.82:282,33,0	1/1:12,0:12:25.21:143,25,0	1/1:21,0:21:55.15:483,55,0	1/1:10,0:10:23.65:154,24,0	1/1:16,1:15:32.16:314,32,0	1/1:8,1:9:22.48:192,22,0	1/1:11,0:11:20.69:134,21,0	1/1:9,3:12:29.65:228,30,0	1/1:9,0:9:14.59:131,15,0	1/1:5,0:5:8.87:58,9,0	1/1:4,0:4:8.87:58,9,0	1/1:12,0:12:11.85:80,12,0	1/1:18,1:19:43.06:384,43,0	1/1:18,2:20:57.02:539,57,0	1/1:7,0:7:17.43:127,17,0	1/1:15,1:15:24:243,24,0	1/1:2,0:2:5.91:38,6,0	1/1:6,0:6:11.72:70,12,0	1/1:10,0:10:6.38:39,6,0	0/0:12,0:12:33.08:0,33,371	1/1:16,4:20:59.08:556,59,0	1/1:18,1:19:21:186,21,0	1/1:12,1:13:24.02:231,24,0
chr10	38957136	.	C	CTT	1996.51	PASS	AB=0.982;AC=20;AF=0.370;AN=54;BaseQRankSum=-4.008;DP=397;FS=0.000;HRun=9;HaplotypeScore=77.0103;InbreedingCoeff=0.7122;MQ=65.94;MQ0=9;MQRankSum=-2.335;QD=15.36;ReadPosRankSum=-0.732;VQSLOD=1.4022;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:95.94:0,96,1076	1/1:0,4:5:9.03:139,9,0	0/1:26,0:14:1.41:1,0,30	0/0:23,0:12:1.69:0,2,57	1/1:5,11:17:29.59:423,30,0	0/0:11,0:12:23.39:0,23,291	0/0:2,0:2:5.93:0,6,49	0/0:29,0:29:65.33:0,65,664	1/1:3,3:6:3.01:46,3,0	0/0:19,0:18:48.10:0,48,497	0/0:11,0:11:17.96:0,18,184	1/1:1,0:2:2.80:13,3,0	0/0:7,0:7:14.77:0,15,137	0/1:9,0:9:0.22:0,0,197	1/1:0,5:5:9.03:138,9,0	1/1:2,6:8:5.98:66,6,0	1/1:5,34:40:63.34:1299,63,0	0/0:23,0:23:56.74:0,57,565	0/0:22,0:19:51.12:0,51,542	0/0:9,0:9:21.03:0,21,216	0/0:8,0:7:8.99:0,9,96	./.	1/1:2,0:5:8.54:43,9,0	1/1:3,0:3:0.47:1,0,0	0/0:18,0:18:45.08:0,45,471	0/0:15,0:15:45.10:0,45,472	0/0:14,0:14:33.05:0,33,343	0/0:13,0:13:27:0,27,287
chr10	38957277	.	CTG	C	3669.21	PASS	AB=0.944;AC=31;AF=0.574;AN=54;BaseQRankSum=1.794;DP=424;FS=9.833;HRun=0;HaplotypeScore=94.4110;InbreedingCoeff=0.4801;MQ=48.84;MQ0=30;MQRankSum=-1.927;QD=12.70;ReadPosRankSum=-2.984;VQSLOD=1.7793;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:17:5.05:0,5,192	1/1:5,0:5:8.95:67,9,0	0/0:35,0:15:33.11:0,33,482	0/0:23,0:13:20.89:0,21,263	1/1:2,6:6:9.03:111,9,0	0/1:10,0:10:6.48:6,0,144	0/0:14,0:14:23.57:0,24,358	1/1:17,16:26:33.09:394,33,0	1/1:13,0:13:29.87:228,30,0	0/0:16,0:15:13.18:0,13,295	0/1:11,0:11:2.94:3,0,34	0/1:9,0:9:2.32:2,0,38	0/1:5,0:5:6.02:6,0,16	0/0:6,0:6:2.73:0,3,77	1/1:10,0:10:14.94:116,15,0	1/1:6,0:6:2.99:23,3,0	1/1:17,9:21:31.61:341,32,0	0/0:18,0:18:18.78:0,19,286	1/1:11,14:20:39.12:480,39,0	1/1:2,7:8:18.06:222,18,0	1/1:3,21:20:45.14:554,45,0	./.	0/0:3,0:3:2.14:0,2,43	0/1:25,0:25:5.32:5,0,115	0/1:16,0:16:2.38:2,0,111	0/1:7,13:13:47.12:333,0,47	1/1:3,19:16:36.11:443,36,0	1/1:3,9:12:27.08:332,27,0
chr10	38957289	.	GTGTGTA	G	3146.01	PASS	AB=1.000;AC=25;AF=0.463;AN=54;BaseQRankSum=0.936;DP=423;FS=21.818;HRun=0;HaplotypeScore=123.9111;InbreedingCoeff=-0.1709;MQ=47.17;MQ0=27;MQRankSum=-7.525;QD=10.81;ReadPosRankSum=-1.693;VQSLOD=1.0982;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:20:74.08:74,0,187	1/1:0,7:7:8.95:208,9,0	0/0:29,0:11:33.11:0,33,482	0/0:20,0:11:20.89:0,21,263	0/1:9,0:7:24.86:25,0,113	0/1:10,0:10:99:141,0,139	0/1:14,0:14:8.69:9,0,279	0/1:25,0:16:55.90:349,0,56	1/1:0,13:14:30.10:678,30,0	0/1:15,0:14:99:103,0,273	0/1:11,0:11:29.11:71,0,29	0/1:11,0:11:7.65:8,0,49	0/1:5,0:5:11.94:85,0,12	0/1:6,0:6:24.06:24,0,73	1/1:1,9:10:15.05:347,15,0	1/1:0,6:6:3.01:70,3,0	1/1:22,6:24:40.59:538,41,0	0/1:21,0:21:45.77:46,0,250	0/1:22,0:18:99:229,0,224	0/0:8,0:7:18.05:0,18,205	0/1:29,0:25:30.67:31,0,514	./.	0/0:4,0:4:3.90:0,4,46	0/0:27,0:27:19.82:0,20,155	0/1:16,0:16:70.77:234,0,71	0/0:20,0:13:19.14:0,19,405	0/0:23,0:16:5.22:0,5,384	0/1:9,0:9:46.71:47,0,212
chr10	38957291	.	GTGTA	G	2504.16	PASS	AC=34;AF=0.680;AN=50;BaseQRankSum=5.100;DP=426;FS=4.511;HRun=0;HaplotypeScore=115.9066;InbreedingCoeff=0.7936;MQ=47.05;MQ0=27;MQRankSum=-5.760;QD=11.03;ReadPosRankSum=-0.791;VQSLOD=2.9964;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:19:9.44:84,9,0	1/1:7,0:7:8.94:98,9,0	./.	./.	0/0:8,0:7:8.92:0,9,62	1/1:10,0:10:15.02:140,15,0	1/1:14,0:14:3:28,3,0	0/0:24,0:17:14.99:0,15,128	1/1:14,0:14:30.08:324,30,0	1/1:14,0:13:14.94:124,15,0	1/1:11,0:11:8.93:73,9,0	1/1:3,9:12:21.02:302,21,0	1/1:5,0:5:9:81,9,0	1/1:6,0:6:3:27,3,0	1/1:10,0:10:15.04:163,15,0	1/1:6,0:6:3.01:34,3,0	1/1:26,0:25:20.95:189,21,0	1/1:20,0:20:8.96:72,9,0	0/0:22,0:18:7.89:0,8,162	0/0:7,0:7:17.86:0,18,125	0/0:28,0:27:59.58:0,60,463	./.	1/1:1,3:4:3.01:47,3,0	1/1:6,21:27:42.14:660,42,0	1/1:4,0:16:27.02:247,27,0	0/0:16,0:13:12.76:0,13,186	0/0:21,0:15:38.72:0,39,277	0/0:9,0:9:20.83:0,21,146
chr10	38957293	.	GTA	G	1863.21	PASS	AB=0.902;AC=32;AF=0.593;AN=54;BaseQRankSum=8.915;DP=426;FS=0.000;HRun=0;HaplotypeScore=105.0199;InbreedingCoeff=-0.2187;MQ=46.88;MQ0=28;MQRankSum=-3.104;QD=5.15;ReadPosRankSum=6.711;VQSLOD=2.1075;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:12,8:19:34.64:35,0,77	1/1:7,0:7:8.64:59,9,0	0/0:28,0:11:33.07:0,33,378	0/0:21,0:10:9.16:0,9,198	0/1:9,0:7:8.65:27,0,9	0/1:5,5:10:47.65:75,0,48	0/0:11,3:14:9.68:0,10,138	0/1:27,0:17:85.53:92,0,86	1/1:14,0:14:29.47:186,29,0	0/1:9,5:13:70.78:71,0,85	0/1:2,8:10:5.91:46,0,6	0/1:12,0:12:14.34:61,0,14	1/1:2,3:5:8.89:60,9,0	0/1:5,1:6:11.11:11,0,35	1/1:9,0:9:14.76:94,15,0	1/1:6,0:6:2.97:20,3,0	1/1:30,0:25:33.61:258,34,0	0/1:16,2:18:99:106,0,106	0/1:26,0:18:11.66:115,0,12	1/1:8,0:7:16.52:73,17,0	0/1:33,0:29:99:131,0,121	./.	0/1:4,0:4:5.03:5,0,31	0/1:27,0:27:58.71:121,0,59	0/1:16,0:16:49.91:50,0,78	0/1:20,0:13:13.36:95,0,13	0/1:22,0:15:8.30:121,0,8	1/1:9,0:9:25.22:119,25,0
chr10	38957297	.	GTATGTATGTA	G	2163.68	PASS	AB=0.826;AC=12;AF=0.214;AN=56;BaseQRankSum=6.220;DP=438;FS=1.351;HRun=0;HaplotypeScore=148.8166;InbreedingCoeff=-0.0967;MQ=45.40;MQ0=27;MQRankSum=-7.655;QD=14.72;ReadPosRankSum=3.125;VQSLOD=2.8184;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:13,7:19:87.21:203,0,87	0/0:7,0:7:9.45:0,9,110	0/0:26,0:8:21.07:0,21,300	0/0:20,0:8:18.04:0,18,231	0/0:9,0:7:12.04:0,12,420	0/1:5,4:10:56.01:345,0,56	0/1:11,3:14:99:128,0,110	0/0:30,0:20:59.81:0,60,1253	0/1:14,0:14:16.48:16,0,367	0/1:10,5:14:99:317,0,126	0/1:2,8:10:7.35:193,0,7	0/0:13,0:13:27.09:0,27,610	1/1:2,3:5:9.03:226,9,0	0/1:4,1:5:38.95:67,0,39	0/0:10,0:10:18.06:0,18,305	0/0:6,0:6:3.01:0,3,44	0/0:31,0:27:41.02:0,41,703	0/1:15,2:17:96.40:279,0,96	0/0:27,0:19:54.05:0,54,1565	0/0:8,0:7:18.06:0,18,766	0/0:35,0:31:78.21:0,78,2768	0/0:2,0:1:3.01:0,3,82	0/0:4,0:4:6.02:0,6,106	0/0:29,0:29:38.83:0,39,1081	0/1:16,0:16:31.90:522,0,32	0/1:21,0:14:17.70:18,0,1371	0/0:23,0:16:48.16:0,48,1886	0/0:10,0:10:30.10:0,30,1036
chr10	38957693	.	C	CT	3697.15	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-10.535;DP=387;FS=1.491;HRun=10;HaplotypeScore=56.0023;InbreedingCoeff=0.8729;MQ=66.25;MQ0=8;MQRankSum=-0.404;QD=19.06;ReadPosRankSum=-0.026;VQSLOD=4.2054;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:3,0:27:40.74:0,41,118	1/1:0,4:4:9.02:96,9,0	0/0:16,0:12:20.87:0,21,164	0/0:11,0:8:7.73:0,8,55	1/1:5,18:23:36.09:381,36,0	0/0:1,0:18:26.48:0,26,77	0/0:2,0:16:21.17:0,21,67	1/1:4,14:14:36.04:366,36,0	1/1:0,7:7:21.05:224,21,0	0/0:0,0:15:31.46:0,31,100	0/0:1,0:18:32.59:0,33,94	1/1:1,0:4:5.68:28,6,0	0/0:0,0:12:21.65:0,22,63	0/0:2,0:3:4.02:0,4,12	1/1:0,5:5:12.03:128,12,0	1/1:1,7:8:18.05:192,18,0	1/1:6,23:29:60.15:640,60,0	0/0:7,0:26:13.74:0,14,65	1/1:4,11:15:11.39:305,11,0	1/1:1,6:7:8.96:81,9,0	1/1:1,9:9:12.03:128,12,0	1/1:0,2:2:3.01:32,3,0	1/1:3,0:6:8.52:43,9,0	1/1:1,0:5:8.58:45,9,0	0/0:29,0:28:74.83:0,75,604	1/1:4,15:17:35.91:370,36,0	1/1:3,18:21:39.10:416,39,0	1/1:0,10:10:21.05:224,21,0
chr10	38957978	.	TGTGTG	T	2857.94	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=10.391;DP=674;FS=11.593;HRun=0;HaplotypeScore=141.4945;InbreedingCoeff=0.9972;MQ=68.47;MQ0=0;MQRankSum=-11.031;QD=46.10;ReadPosRankSum=0.966;VQSLOD=3.5106;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,132,4175	0/0:9,0:9:27.09:0,27,872	0/0:12,0:12:36.12:0,36,933	0/0:13,0:14:38.64:0,39,951	0/0:34,0:34:99:0,102,3086	0/0:30,0:30:78.20:0,78,2374	0/0:27,0:27:81.23:0,81,2456	0/0:25,0:25:72.24:0,72,2253	0/0:24,0:24:72.22:0,72,2181	0/0:39,0:39:99:0,111,3306	0/0:15,0:15:45.11:0,45,1372	1/1:0,23:23:57.20:1268,57,0	0/0:16,0:16:48.15:0,48,1478	0/0:21,0:21:57.13:0,57,1731	0/0:37,0:37:99:0,105,3359	0/0:27,0:27:75.26:0,75,2419	0/0:34,0:34:96.31:0,96,3020	0/0:7,0:7:21.07:0,21,679	0/0:26,0:26:78.26:0,78,2424	0/0:26,0:26:72.19:0,72,2120	0/0:37,0:37:99:0,108,3230	0/0:14,0:14:39.13:0,39,1256	1/1:0,20:20:48.16:1067,48,0	1/1:2,17:19:30.10:666,30,0	0/0:21,0:21:63.22:0,63,2033	0/0:25,0:25:69.23:0,69,2159	0/0:37,0:37:99:0,99,2940	0/0:9,0:9:24.08:0,24,775
chr10	38961840	.	TG	T	8503.11	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=6.996;DP=767;FS=3.911;HRun=1;HaplotypeScore=90.0188;InbreedingCoeff=0.9497;MQ=67.83;MQ0=3;MQRankSum=-1.598;QD=36.49;ReadPosRankSum=3.216;VQSLOD=5.3161;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,41:41:99:1632,117,0	0/0:12,0:12:36.12:0,36,575	0/0:24,0:14:23.56:0,24,324	0/1:20,0:10:1.46:1,0,193	0/0:34,0:34:99:0,102,1556	1/1:0,17:17:48.16:671,48,0	1/1:0,32:32:87.29:1214,87,0	0/0:32,0:32:96.32:0,96,1495	0/0:51,0:51:99:0,150,2345	1/1:1,24:25:72.24:998,72,0	1/1:0,18:18:54.18:755,54,0	0/0:18,0:18:54.18:0,54,854	1/1:0,25:25:75.25:1049,75,0	1/1:0,31:31:93.31:1301,93,0	0/0:40,0:40:99:0,120,1875	0/0:34,0:34:99:0,102,1588	0/0:21,0:21:60.18:0,60,903	1/1:0,23:23:63.21:881,63,0	0/0:26,0:26:78.19:0,78,1167	0/0:29,0:29:87.28:0,87,1358	0/0:41,0:41:99:0,120,1909	0/0:22,0:22:63.21:0,63,988	0/0:19,0:19:54.18:0,54,842	0/0:35,0:35:99:0,102,1569	0/0:17,0:17:42.14:0,42,661	0/0:29,0:29:87.29:0,87,1359	0/0:31,0:31:87.28:0,87,1365	0/0:19,0:19:57.19:0,57,911
chr10	38962032	.	CA	C	2370.17	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=4.765;DP=673;FS=0.000;HRun=1;HaplotypeScore=104.4524;InbreedingCoeff=0.9758;MQ=78.80;MQ0=0;MQRankSum=-1.140;QD=35.38;ReadPosRankSum=3.315;VQSLOD=3.5723;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,144,2252	0/0:10,0:10:30.10:0,30,445	0/0:20,0:20:40.93:0,41,542	0/0:14,0:14:8.21:0,8,407	0/0:33,0:33:99:0,99,1408	0/0:22,0:22:66.17:0,66,962	0/0:21,0:21:63.21:0,63,1007	0/0:26,0:26:78.26:0,78,1222	0/0:36,0:36:99:0,108,1619	0/0:22,0:22:66.22:0,66,1037	0/0:19,0:19:57.18:0,57,887	1/1:0,20:20:54.18:754,54,0	0/0:23,0:23:69.22:0,69,1078	0/0:18,0:18:54.16:0,54,817	0/0:34,0:33:99:0,102,1484	0/0:30,0:30:90.29:0,90,1321	0/0:32,0:32:96.32:0,96,1434	0/0:16,0:16:45.14:0,45,695	0/0:25,0:25:75.19:0,75,1106	0/0:15,0:15:45.15:0,45,717	0/0:31,0:31:93.30:0,93,1460	0/0:20,0:20:60.16:0,60,833	1/1:0,17:17:48.16:670,48,0	1/1:0,30:30:78.26:1089,78,0	0/0:21,0:21:63.21:0,63,1007	0/0:25,0:25:72.24:0,72,1114	0/0:31,0:31:93.32:0,93,1483	0/0:14,0:14:42.14:0,42,671
chr10	38963218	.	TA	T	2379.19	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=7.755;DP=487;FS=7.167;HRun=9;HaplotypeScore=61.1457;InbreedingCoeff=0.9254;MQ=61.54;MQ0=2;MQRankSum=2.095;QD=19.99;ReadPosRankSum=1.982;VQSLOD=4.3176;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:66.19:0,66,754	1/1:0,3:3:9:82,9,0	0/0:7,0:6:11.06:0,11,107	0/0:12,0:6:14.93:0,15,142	1/1:4,27:31:81:733,81,0	0/0:18,0:18:48.14:0,48,553	0/0:13,0:13:36.09:0,36,405	0/0:37,0:37:81.21:0,81,913	1/1:1,14:15:39.02:357,39,0	0/0:32,0:32:87.24:0,87,986	0/0:22,0:22:63.16:0,63,704	0/0:15,0:15:45.12:0,45,508	0/0:9,0:9:27:0,27,293	0/0:11,0:11:30.09:0,30,345	1/1:3,13:16:27.01:247,27,0	1/1:0,11:11:30.02:275,30,0	1/1:5,34:40:92.08:829,92,0	0/0:22,0:22:57.15:0,57,647	0/0:18,0:18:48.14:0,48,554	0/0:22,0:22:57.13:0,57,627	0/0:1,0:1:3.01:0,3,35	1/1:1,2:3:5.96:47,6,0	0/0:8,0:9:17.89:0,18,187	0/0:6,0:6:18.04:0,18,198	0/0:22,0:22:57.17:0,57,658	0/0:23,0:23:57.17:0,57,658	0/0:29,0:29:69.18:0,69,775	0/0:15,0:15:40.27:0,40,453
chr10	38963977	.	C	CCT	3571.54	PASS	AB=1.000;AC=27;AF=0.482;AN=56;BaseQRankSum=12.186;DP=399;FS=18.345;HRun=0;HaplotypeScore=137.4851;InbreedingCoeff=0.8598;MQ=60.61;MQ0=27;MQRankSum=-9.995;QD=26.85;ReadPosRankSum=-0.465;VQSLOD=3.6830;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:12:21.65:302,22,0	1/1:6,0:6:8.61:160,9,0	0/0:18,0:12:33.11:0,33,501	0/0:17,0:16:42.14:0,42,618	1/1:13,2:15:8.92:148,9,0	1/1:13,0:13:36:586,36,0	1/1:10,0:9:23.08:387,23,0	0/0:30,0:25:72.24:0,72,1087	1/1:5,3:8:15.05:255,15,0	1/1:11,0:11:29.85:458,30,0	1/1:10,0:10:12.04:196,12,0	0/0:17,0:16:45.11:0,45,661	0/0:11,0:10:2.84:0,3,16	1/1:3,0:3:8.50:89,9,0	1/1:4,0:4:1.57:49,2,0	1/1:10,0:9:18:311,18,0	1/1:10,1:5:7.73:164,8,0	0/1:4,0:3:1.49:49,0,1	0/0:19,0:17:45.15:0,45,689	0/0:12,0:12:36.12:0,36,551	0/0:27,0:23:66.22:0,66,1011	1/1:10,1:11:23.34:417,23,0	0/0:17,0:17:51.16:0,51,760	0/0:26,0:25:66.18:0,66,985	0/0:17,0:17:48.16:0,48,734	0/0:25,0:23:62.46:0,62,1005	0/0:12,0:12:33.11:0,33,505	0/0:18,0:17:42.14:0,42,643
chr10	38963979	.	CA	C	1048.69	PASS	AC=26;AF=0.500;AN=52;BaseQRankSum=5.019;DP=407;FS=1.766;HRun=1;HaplotypeScore=41.4706;InbreedingCoeff=0.8972;MQ=62.02;MQ0=26;MQRankSum=-6.133;QD=7.77;ReadPosRankSum=-2.032;VQSLOD=0.1768;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:12:20.73:140,21,0	1/1:6,0:6:11.81:76,12,0	0/0:18,0:12:33.11:0,33,528	0/0:18,0:17:48.11:0,48,709	1/1:17,0:16:11.95:103,12,0	1/1:14,0:14:32.67:227,33,0	1/1:11,0:10:23.71:163,24,0	0/0:32,0:27:81.16:0,81,1173	1/1:9,0:9:8.84:60,9,0	1/1:11,0:11:26.73:189,27,0	./.	0/0:17,0:16:42.14:0,42,669	1/1:1,10:10:3.01:42,3,0	./.	1/1:5,0:5:2.94:18,3,0	1/1:10,0:9:8.90:60,9,0	1/1:11,0:5:11.49:64,11,0	1/1:4,0:3:8.94:65,9,0	0/0:19,0:17:51.05:0,51,759	0/0:12,0:12:36.12:0,36,575	0/0:27,0:23:69.19:0,69,1073	1/1:11,0:11:8.72:50,9,0	0/0:18,0:18:54.17:0,54,837	0/0:26,0:25:72.21:0,72,1094	0/0:20,0:20:60.15:0,60,868	0/0:22,0:23:69.02:0,69,1068	0/0:11,0:11:33.11:0,33,517	0/0:16,0:15:42.14:0,42,671
chr10	38964791	.	CA	C	6856.26	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=13.397;DP=541;FS=1.067;HRun=8;HaplotypeScore=66.8806;InbreedingCoeff=0.9809;MQ=66.02;MQ0=1;MQRankSum=-1.283;QD=25.49;ReadPosRankSum=3.504;VQSLOD=5.6258;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,28:29:75.12:724,75,0	1/1:1,5:6:15.02:145,15,0	0/0:20,0:18:39:0,39,413	0/0:21,0:16:34.60:0,35,349	1/1:0,19:19:54.08:521,54,0	1/1:1,11:12:27.04:260,27,0	1/1:0,12:12:30.05:290,30,0	0/0:27,0:27:68.86:0,69,787	1/1:1,14:14:36.06:348,36,0	1/1:1,23:24:69.09:659,69,0	1/1:1,9:10:24.03:232,24,0	0/0:19,0:19:57.16:0,57,677	1/1:1,15:16:39.06:377,39,0	1/1:2,17:19:51.08:492,51,0	1/1:2,20:22:57.09:549,57,0	1/1:0,15:15:45.07:434,45,0	1/1:0,34:34:90.14:869,90,0	1/1:0,27:27:72.12:695,72,0	0/0:19,0:19:54.14:0,54,638	0/0:26,0:26:72.21:0,72,860	0/0:26,0:26:75.22:0,75,894	1/1:0,9:9:27.04:261,27,0	0/0:15,0:15:45.11:0,45,528	0/0:28,0:28:75.23:0,75,906	0/0:18,0:18:51.16:0,51,616	0/0:18,2:20:6.17:0,6,564	0/0:26,0:26:69.20:0,69,819	0/0:5,0:5:15.05:0,15,181
chr10	38964982	.	AAG	A	811.44	PASS	AB=0.990;AC=25;AF=0.446;AN=56;BaseQRankSum=1.677;DP=421;FS=30.096;HRun=0;HaplotypeScore=114.8446;InbreedingCoeff=0.0063;MQ=43.91;MQ0=29;MQRankSum=-2.781;QD=3.05;ReadPosRankSum=-3.383;VQSLOD=-0.5054;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:11,0:10:1.67:33,0,2	1/1:7,0:6:17.12:103,17,0	0/1:56,0:11:20.35:20,0,46	0/0:60,0:15:10.33:0,10,102	0/1:20,0:18:32.15:62,0,32	0/0:17,0:15:1.80:0,2,76	0/1:9,0:7:4.70:11,0,5	0/1:11,1:12:10.06:83,0,10	1/1:7,0:5:2.27:28,2,0	0/1:16,0:13:42.57:43,0,64	0/0:18,0:18:2.97:0,3,86	0/0:12,1:11:17.93:0,18,118	0/0:4,0:4:6.38:0,6,45	0/0:9,0:9:14.34:0,14,96	0/1:10,0:9:24.25:47,0,24	1/1:15,0:13:1.54:47,2,0	0/1:14,0:14:11.41:11,0,44	0/1:14,0:13:1.20:1,0,62	0/1:12,0:11:31.59:36,0,32	0/1:20,0:16:19.75:59,0,20	1/1:3,1:4:9.29:57,9,0	1/1:3,0:3:5.78:31,6,0	0/0:17,0:16:14.52:0,15,199	0/0:6,0:4:2.36:0,2,21	0/0:11,0:10:12.55:0,13,233	0/1:16,1:16:33.02:106,0,33	1/1:15,1:14:17.40:163,17,0	0/1:3,0:3:0.17:31,0,0
chr10	38964986	.	AAC	A	652.88	PASS	AB=0.902;AC=21;AF=0.375;AN=56;BaseQRankSum=0.509;DP=427;FS=38.716;HRun=0;HaplotypeScore=120.1053;InbreedingCoeff=-0.0014;MQ=48.82;MQ0=28;MQRankSum=-1.318;QD=3.59;ReadPosRankSum=-1.853;VQSLOD=1.0719;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:10,1:11:15.04:15,0,87	1/1:3,4:6:13.93:106,14,0	0/0:61,0:15:3.41:0,3,210	0/0:62,2:17:2.52:0,3,180	0/1:13,6:17:65:65,0,157	0/0:17,0:15:10.80:0,11,290	0/0:10,0:8:18.75:0,19,166	0/1:12,0:12:52.74:62,0,53	0/1:5,2:5:10.94:35,0,11	0/1:15,1:13:25.80:26,0,264	0/0:18,0:18:34.14:0,34,448	0/0:14,0:12:26.66:0,27,397	0/0:4,0:4:9.02:0,9,116	0/0:8,0:8:20.98:0,21,271	0/1:7,3:9:53.67:54,0,86	0/1:13,2:13:37.95:38,0,39	0/1:12,2:14:27.50:27,0,211	0/0:15,0:14:7.81:0,8,283	0/1:12,0:11:49.46:49,0,59	0/1:18,0:14:34.52:50,0,35	1/1:4,0:4:5.94:42,6,0	1/1:2,1:3:3.86:23,4,0	0/0:18,0:17:36.87:0,37,646	0/0:5,0:4:6.02:0,6,90	0/0:11,0:10:11.88:0,12,377	0/1:16,0:15:68.04:83,0,68	1/1:15,0:13:16.08:115,16,0	1/1:2,0:3:0.35:31,0,0
chr10	38964992	.	ACG	A	1627.88	PASS	AB=0.926;AC=31;AF=0.554;AN=56;BaseQRankSum=1.432;DP=400;FS=51.070;HRun=0;HaplotypeScore=116.5532;InbreedingCoeff=0.0522;MQ=53.69;MQ0=20;MQRankSum=-1.958;QD=4.93;ReadPosRankSum=-1.699;VQSLOD=0.4301;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:10,1:11:27.05:83,0,27	1/1:6,1:6:17.05:101,17,0	0/1:61,1:18:0.28:0,0,277	0/1:65,1:20:5.75:6,0,133	0/1:18,0:17:37.42:114,0,37	0/1:13,2:14:74.96:91,0,75	0/1:9,1:9:22.19:22,0,71	0/1:2,5:7:37.90:158,0,38	1/1:5,2:5:12.76:76,13,0	0/1:15,1:13:62.39:103,0,62	0/0:17,0:17:13.06:0,13,154	0/0:11,2:11:24.01:0,24,335	0/1:6,0:6:41.71:48,0,42	0/0:6,0:6:12.50:0,12,89	1/1:10,0:9:6.07:74,6,0	1/1:11,1:11:11.73:61,12,0	0/1:12,0:12:18.04:18,0,38	0/1:13,1:13:69.23:69,0,116	1/1:4,4:7:4.80:78,5,0	0/1:14,0:11:5.73:103,0,6	1/1:0,2:2:6.02:76,6,0	1/1:3,0:3:5.64:27,6,0	0/0:20,0:20:24.42:0,24,543	0/0:2,1:3:6.02:0,6,110	0/0:11,0:10:26.92:0,27,450	0/1:12,1:12:2:199,0,2	1/1:1,10:10:18.05:222,18,0	1/1:1,2:3:6.02:77,6,0
chr10	38964993	.	CGA	C	1928.41	PASS	AB=0.894;AC=31;AF=0.554;AN=56;BaseQRankSum=0.825;DP=398;FS=35.268;HRun=0;HaplotypeScore=116.5184;InbreedingCoeff=-0.1550;MQ=56.83;MQ0=16;MQRankSum=-3.890;QD=6.39;ReadPosRankSum=-1.938;VQSLOD=1.3591;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:8,3:11:13.75:108,0,14	1/1:2,5:6:18.04:199,18,0	0/0:62,0:20:26.55:0,27,353	0/1:66,0:20:11.10:11,0,158	0/1:10,8:17:64.39:248,0,64	0/1:13,2:14:44.01:136,0,44	0/1:8,1:8:54.79:56,0,55	0/1:7,0:7:42.89:82,0,43	1/1:5,2:5:9.71:106,10,0	0/1:14,2:13:50.97:142,0,51	0/1:16,0:16:24.55:25,0,105	0/0:13,0:11:22.82:0,23,257	0/1:4,2:6:40:82,0,40	0/0:6,0:6:10.31:0,10,69	0/1:7,3:9:16.79:160,0,17	1/1:9,3:11:6.05:112,6,0	0/1:11,2:13:76.63:103,0,77	0/1:13,1:13:80.62:81,0,104	1/1:8,0:8:7.32:65,7,0	0/1:14,0:11:8.38:47,0,8	1/1:2,0:2:5.92:38,6,0	1/1:2,1:3:6.01:61,6,0	0/1:20,0:21:12.91:13,0,431	0/0:3,0:3:6.02:0,6,103	0/0:11,0:10:27.09:0,27,516	0/1:11,0:10:19.04:75,0,19	1/1:11,0:9:17.75:117,18,0	1/1:3,0:3:5.88:35,6,0
chr10	38964994	.	G	GAAAAA	6329.72	PASS	AB=0.998;AC=44;AF=0.786;AN=56;BaseQRankSum=0.486;DP=398;FS=1.451;HRun=5;HaplotypeScore=121.4689;InbreedingCoeff=0.0157;MQ=58.39;MQ0=15;MQRankSum=-2.253;QD=16.83;ReadPosRankSum=1.293;VQSLOD=0.8229;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:11:17.22:223,17,0	1/1:7,0:6:18.06:325,18,0	0/1:60,0:21:1.20:1,0,162	0/1:66,0:20:18.20:18,0,36	0/1:18,0:17:23.83:546,0,24	1/1:15,0:14:36.01:498,36,0	1/1:9,0:8:0.51:223,1,0	0/1:7,0:7:14.08:54,0,14	1/1:7,0:5:13.52:173,14,0	1/1:14,0:13:6.89:475,7,0	1/1:16,0:16:19.18:632,19,0	0/1:13,0:11:25.82:360,0,26	1/1:7,0:7:12:165,12,0	1/1:6,0:6:6.55:265,7,0	0/1:10,0:9:12.85:329,0,13	1/1:7,5:11:9.24:209,9,0	0/1:13,0:13:12.28:350,0,12	1/1:14,0:13:12.34:366,12,0	1/1:9,0:9:4.56:26,5,0	1/1:14,0:11:4.85:57,5,0	1/1:2,0:2:2.22:17,2,0	1/1:3,0:3:6.02:109,6,0	0/1:21,0:21:14.66:779,0,15	1/1:3,0:3:3.01:39,3,0	0/0:11,0:10:27.09:0,27,482	1/1:11,0:10:5.73:74,6,0	0/0:11,0:9:2.98:0,3,7	1/1:3,0:3:2.92:17,3,0
chr10	38964995	.	A	AAAAAC	8639.91	PASS	AB=0.958;AC=38;AF=0.679;AN=56;BaseQRankSum=-4.084;DP=413;FS=3.122;HRun=0;HaplotypeScore=118.1866;InbreedingCoeff=0.5089;MQ=57.99;MQ0=15;MQRankSum=-2.235;QD=24.27;ReadPosRankSum=0.865;VQSLOD=4.7990;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,2:12:20.72:325,21,0	1/1:7,0:6:18.06:426,18,0	0/1:63,0:22:10.48:10,0,188	0/1:68,0:20:4.27:4,0,65	1/1:17,2:18:36.12:801,36,0	1/1:13,3:15:39.50:735,40,0	1/1:7,2:8:18.01:326,18,0	0/0:10,0:10:2.45:0,2,36	1/1:8,0:6:5.76:206,6,0	1/1:11,4:13:29.97:683,30,0	1/1:10,7:17:33.11:827,33,0	1/1:6,7:12:18.06:521,18,0	1/1:7,1:8:17.94:245,18,0	1/1:2,4:6:7.93:351,8,0	0/1:8,2:9:11.65:438,0,12	1/1:11,1:11:4.25:274,4,0	1/1:10,3:13:23.87:520,24,0	1/1:12,3:14:30.06:573,30,0	0/0:9,0:9:12.80:0,13,86	0/1:14,0:11:10.89:11,0,30	0/0:2,0:2:3.84:0,4,21	1/1:3,0:3:6.02:144,6,0	1/1:7,16:24:50.69:1161,51,0	1/1:3,0:3:3.01:56,3,0	0/0:11,0:10:27.09:0,27,508	0/0:11,0:10:3.19:0,3,103	0/0:11,0:9:17.24:0,17,113	0/0:3,0:3:4.52:0,5,25
chr10	38965011	.	AAGAG	A	406.68	PASS	AB=0.967;AC=10;AF=0.179;AN=56;BaseQRankSum=4.077;DP=395;FS=17.174;HRun=0;HaplotypeScore=140.4021;InbreedingCoeff=-0.0394;MQ=64.75;MQ0=3;MQRankSum=-2.935;QD=2.34;ReadPosRankSum=-2.610;VQSLOD=1.1365;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:29.86:0,30,287	0/0:9,0:8:24:0,24,415	0/1:36,0:22:5.31:5,0,480	0/1:44,0:22:40.12:40,0,346	0/1:19,1:20:2.62:3,0,754	0/1:18,0:17:67.92:68,0,274	0/0:9,0:8:17.92:0,18,164	0/0:18,0:18:54.18:0,54,1197	0/0:7,0:6:18.04:0,18,332	0/1:12,1:11:99:115,0,160	0/1:16,0:16:99:105,0,209	0/0:14,0:12:13.63:0,14,536	0/0:9,0:9:23.91:0,24,238	0/1:8,0:8:21.13:21,0,106	0/0:10,0:9:27.09:0,27,621	0/0:11,0:10:14.98:0,15,278	0/0:11,0:11:27.03:0,27,617	0/1:13,2:15:99:146,0,174	0/0:19,0:18:42.94:0,43,974	0/0:14,0:11:18.06:0,18,385	0/0:5,0:5:15.05:0,15,314	0/0:2,0:2:6.01:0,6,89	0/0:23,0:23:40.47:0,40,837	1/1:1,1:2:3.01:40,3,0	0/0:12,0:11:30.10:0,30,698	0/0:12,0:11:29.92:0,30,537	0/0:12,0:10:7.23:0,7,256	0/0:12,0:12:30.99:0,31,602
chr10	38965012	.	AGAG	A	459.41	PASS	AB=0.906;AC=8;AF=0.143;AN=56;BaseQRankSum=4.440;DP=372;FS=23.040;HRun=0;HaplotypeScore=128.8959;InbreedingCoeff=0.0058;MQ=65.17;MQ0=3;MQRankSum=-2.301;QD=4.18;ReadPosRankSum=-3.075;VQSLOD=0.3054;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:28.98:0,29,245	0/0:9,0:8:24.08:0,24,398	0/0:32,1:21:0.30:0,0,451	0/1:40,1:21:46.77:47,0,317	0/0:20,0:20:25.79:0,26,661	0/1:14,4:17:99:114,0,241	0/0:7,0:6:16.26:0,16,127	0/0:18,0:18:54.18:0,54,1079	0/0:6,1:6:17.95:0,18,279	0/1:9,1:10:84.39:84,0,130	0/1:13,3:16:99:130,0,141	0/0:12,2:12:24.55:0,25,454	0/0:8,0:8:22.76:0,23,203	0/1:7,0:7:40.48:40,0,61	0/0:9,0:9:27.09:0,27,518	0/0:10,0:9:15.05:0,15,251	0/0:9,0:9:27.09:0,27,511	0/1:13,1:14:99:136,0,174	0/0:18,0:17:42.07:0,42,880	0/0:12,0:11:18.06:0,18,358	0/0:6,0:6:15.05:0,15,292	0/0:2,0:2:6.01:0,6,77	0/0:20,1:22:31.62:0,32,670	1/1:2,0:2:3.01:40,3,0	0/0:10,0:10:30.10:0,30,599	0/0:12,0:11:29.93:0,30,544	0/0:11,0:10:18.03:0,18,309	0/0:12,0:12:31.35:0,31,555
chr10	38965015	.	GA	G	2154.73	PASS	AB=0.974;AC=17;AF=0.304;AN=56;BaseQRankSum=3.004;DP=376;FS=7.329;HRun=6;HaplotypeScore=111.8048;InbreedingCoeff=0.8845;MQ=65.56;MQ0=2;MQRankSum=-3.492;QD=16.32;ReadPosRankSum=1.154;VQSLOD=2.7950;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,11:11:30.08:321,30,0	0/0:9,0:8:24.08:0,24,306	0/0:34,0:21:27.72:0,28,333	0/1:35,0:20:4.20:4,0,226	0/0:19,0:19:45.08:0,45,575	1/1:5,15:19:50.01:464,50,0	1/1:2,5:6:18.04:192,18,0	0/0:19,0:19:57.18:0,57,742	0/0:7,0:6:16.29:0,16,192	1/1:2,8:10:27.47:275,27,0	1/1:3,14:17:42.69:388,43,0	0/0:14,0:12:27.08:0,27,345	1/1:1,7:8:23.98:242,24,0	1/1:1,7:8:21.05:217,21,0	0/0:9,0:9:27.09:0,27,353	0/0:10,0:9:15.05:0,15,193	0/0:11,0:11:33.04:0,33,397	1/1:5,9:14:24.02:255,24,0	0/0:19,0:18:45.11:0,45,572	0/0:13,0:12:21.06:0,21,263	0/0:6,0:6:15.05:0,15,197	0/0:2,0:2:6.02:0,6,73	0/0:22,0:22:50.62:0,51,618	0/0:2,0:2:0:0,0,0	0/0:11,0:11:32.58:0,33,390	0/0:12,0:11:30.10:0,30,394	0/0:11,0:10:18.06:0,18,235	0/0:13,0:13:36.10:0,36,455
chr10	38965428	.	CTCTTTCGTTCTTTCTTTCTTTCTT	C	980.17	PASS	AB=0.994;AC=15;AF=0.268;AN=56;BaseQRankSum=2.008;DP=511;FS=1.593;HRun=0;HaplotypeScore=340.8421;InbreedingCoeff=0.2145;MQ=56.01;MQ0=5;MQRankSum=-3.013;QD=4.95;ReadPosRankSum=-0.477;VQSLOD=1.2527;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:25.89:0,26,1010	0/0:7,0:6:9.33:0,9,734	0/0:14,0:4:8.52:0,9,53	0/0:13,0:8:13.65:0,14,112	0/1:24,0:21:0.02:0,0,934	0/1:21,0:19:6.80:7,0,1472	0/1:16,0:15:16.83:17,0,130	0/0:34,0:34:74.83:0,75,855	0/1:17,0:15:12.54:13,0,1180	0/1:18,0:18:10.21:10,0,996	0/1:18,0:18:6.15:6,0,1110	1/1:10,0:10:29.92:503,30,0	0/1:16,0:15:17.77:18,0,976	0/1:15,0:15:1.86:2,0,1004	0/1:14,0:14:22.67:23,0,619	0/0:19,0:17:6.55:0,7,1274	0/0:30,0:30:32.79:0,33,1730	0/0:15,0:15:5.32:0,5,506	0/0:24,0:24:65.76:0,66,2283	0/0:17,0:17:49.97:0,50,1967	0/0:21,0:21:62.71:0,63,2254	0/0:15,0:14:11.64:0,12,1515	1/1:0,18:18:14.35:255,14,0	1/1:10,0:10:21.02:290,21,0	0/0:24,0:24:69.11:0,69,4024	0/0:23,0:23:63.09:0,63,4595	0/0:27,0:26:80.31:0,80,4644	0/0:9,0:9:23.99:0,24,1691
chr10	38965434	.	CGT	C	8357.02	PASS	AB=1.000;AC=31;AF=0.554;AN=56;BaseQRankSum=15.430;DP=493;FS=2.138;HRun=0;HaplotypeScore=108.4880;InbreedingCoeff=0.9151;MQ=53.20;MQ0=10;MQRankSum=-4.896;QD=31.07;ReadPosRankSum=3.120;VQSLOD=6.7556;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,17:20:48.04:716,48,0	1/1:0,7:6:18.06:293,18,0	0/0:13,0:3:9.02:0,9,140	0/0:11,0:6:13.40:0,13,242	1/1:0,17:19:45.13:700,45,0	1/1:5,13:19:48.57:668,49,0	1/1:0,14:13:18.06:289,18,0	0/0:33,0:32:80.72:0,81,1450	1/1:1,12:14:35.66:484,36,0	1/1:0,15:17:44.96:618,45,0	1/1:3,12:17:35.43:665,35,0	0/0:10,0:10:27.13:0,27,191	1/1:1,11:14:34.75:439,35,0	1/1:0,11:13:33.11:480,33,0	1/1:1,12:13:36.11:563,36,0	1/1:0,16:16:33.07:465,33,0	1/1:1,26:26:63.21:1013,63,0	1/1:0,14:15:26.96:401,27,0	0/0:26,0:26:78.16:0,78,1319	0/0:17,0:17:51.16:0,51,933	0/0:22,0:22:66.23:0,66,1259	1/1:1,10:14:38.60:550,39,0	0/1:18,0:18:14.97:15,0,37	0/0:8,0:8:20.42:0,20,117	0/0:23,0:23:69.24:0,69,1383	0/0:21,0:21:63.22:0,63,1269	0/0:28,0:27:84.29:0,84,1662	0/0:12,0:8:24.08:0,24,464
chr10	38965436	.	T	TCTC	5513.93	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=15.074;DP=499;FS=2.151;HRun=0;HaplotypeScore=129.4945;InbreedingCoeff=0.9777;MQ=52.73;MQ0=14;MQRankSum=-4.735;QD=21.54;ReadPosRankSum=3.577;VQSLOD=4.6435;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:23,1:24:41.40:457,41,0	1/1:7,0:6:16.45:132,16,0	0/0:13,0:3:9:0,9,133	0/0:10,0:6:11.62:0,12,223	1/1:17,5:19:44.65:454,45,0	1/1:18,1:19:44.12:498,44,0	1/1:14,0:13:17.96:145,18,0	0/0:32,0:31:83.98:0,84,1444	1/1:13,4:14:33.26:347,33,0	1/1:16,2:18:46.80:472,47,0	1/1:14,2:16:29.64:362,30,0	0/0:10,0:9:27.09:0,27,424	1/1:12,0:14:32.98:358,33,0	1/1:12,1:14:33.03:351,33,0	1/1:13,0:13:15.79:257,16,0	1/1:16,2:16:33.06:417,33,0	1/1:27,0:26:55.36:476,55,0	1/1:14,1:15:27.02:270,27,0	0/0:28,0:26:78.22:0,78,1353	0/0:15,0:15:45.14:0,45,796	0/0:21,0:21:63.19:0,63,1095	1/1:11,4:14:39.10:517,39,0	0/0:18,0:18:12.39:0,12,134	0/0:8,0:8:21.07:0,21,353	0/0:23,0:23:69.24:0,69,1258	0/0:21,0:21:63.22:0,63,1173	0/0:28,0:27:84.29:0,84,1557	0/0:16,0:11:33.01:0,33,509
chr10	38965651	.	A	AG	13577.39	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-7.229;DP=619;FS=5.872;HRun=1;HaplotypeScore=57.9604;InbreedingCoeff=0.9994;MQ=84.06;MQ0=0;MQRankSum=-5.853;QD=40.17;ReadPosRankSum=3.777;VQSLOD=5.4419;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,36:36:99:1483,99,0	1/1:0,8:9:24.08:355,24,0	0/0:17,0:17:51.13:0,51,644	0/0:26,0:26:78.14:0,78,956	1/1:2,24:26:60.19:878,60,0	1/1:0,18:18:48.16:719,48,0	1/1:0,22:22:57.19:854,57,0	0/0:27,0:27:78.24:0,78,989	1/1:3,30:32:96.27:1382,96,0	1/1:1,26:27:72.24:1075,72,0	1/1:1,18:19:54.18:808,54,0	0/0:25,0:25:75.23:0,75,953	1/1:0,18:17:48.16:719,48,0	1/1:0,19:19:54.18:809,54,0	1/1:0,26:26:69.23:1034,69,0	1/1:0,24:24:69.23:1034,69,0	1/1:0,31:31:87.29:1303,87,0	1/1:0,14:14:39.13:584,39,0	0/0:13,0:13:36.12:0,36,468	0/0:31,0:31:90.28:0,90,1153	0/0:24,0:24:72.23:0,72,935	1/1:1,15:16:36.12:540,36,0	0/0:19,0:19:54.16:0,54,685	0/0:24,0:24:69.22:0,69,894	0/0:15,0:15:45.15:0,45,584	0/0:27,0:27:81.26:0,81,1052	0/0:25,0:25:72.23:0,72,935	0/0:8,0:8:24.08:0,24,310
chr10	38965750	.	A	ATATG	19806.69	PASS	AB=0.533;AC=29;AF=0.518;AN=56;BaseQRankSum=-16.327;DP=634;FS=1.015;HRun=0;HaplotypeScore=94.5784;InbreedingCoeff=0.9125;MQ=69.37;MQ0=3;MQRankSum=-2.080;QD=59.66;ReadPosRankSum=5.075;VQSLOD=6.5902;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,17:21:39.13:1086,39,0	0/1:1,6:6:44.85:304,0,45	0/0:11,0:11:20.96:0,21,309	0/0:12,0:12:20.64:0,21,328	1/1:2,14:17:24.08:670,24,0	1/1:2,26:30:66.23:1844,66,0	1/1:3,30:34:66.15:1842,66,0	0/0:31,0:31:84.28:0,84,1620	1/1:1,31:33:84.29:2325,84,0	1/1:1,13:16:45.14:1199,45,0	1/1:6,13:19:27.09:754,27,0	0/0:26,0:26:78.27:0,78,1535	1/1:0,15:16:39.13:1088,39,0	1/1:1,26:27:63.22:1760,63,0	1/1:0,25:25:54.19:1509,54,0	1/1:6,18:24:69.19:1724,69,0	1/1:2,24:25:62.71:1699,63,0	1/1:0,15:15:33.11:922,33,0	0/0:20,0:20:57.18:0,57,1104	0/0:27,0:27:75.24:0,75,1452	0/0:36,0:36:99:0,108,2033	1/1:4,15:19:39.13:1081,39,0	0/0:21,0:21:63.19:0,63,1184	0/0:45,0:44:99:0,135,2611	0/0:15,0:15:42.14:0,42,839	0/0:25,0:25:69.23:0,69,1345	0/0:31,0:31:93.28:0,93,1785	0/0:2,0:2:6.02:0,6,120
chr10	38966494	.	C	CG	4882.82	PASS	AB=0.700;AC=15;AF=0.278;AN=54;BaseQRankSum=-0.947;DP=473;FS=1.834;HRun=1;HaplotypeScore=136.4049;InbreedingCoeff=0.8861;MQ=39.44;MQ0=38;MQRankSum=-3.019;QD=30.33;ReadPosRankSum=0.582;VQSLOD=4.6280;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,27:26:72.09:1009,72,0	0/0:10,0:10:30.10:0,30,384	0/0:8,0:4:9.63:0,10,69	./.	0/0:20,0:17:36.02:0,36,412	1/1:2,15:17:42.13:602,42,0	1/1:5,19:21:54.10:751,54,0	0/0:15,0:15:39.08:0,39,484	0/0:18,0:16:42.12:0,42,513	1/1:9,16:24:69.11:881,69,0	1/1:2,10:10:24.08:356,24,0	0/0:9,0:8:18.06:0,18,229	1/1:5,5:9:24:308,24,0	1/1:9,11:18:48.03:552,48,0	0/0:18,0:17:51.13:0,51,614	0/0:14,0:14:42.11:0,42,513	0/0:30,0:27:74.13:0,74,874	0/1:12,9:15:35.30:423,0,35	0/0:11,0:11:29.96:0,30,334	0/0:13,0:12:30.08:0,30,363	0/0:13,0:9:23.97:0,24,238	0/0:23,0:21:60.15:0,60,708	0/0:21,0:18:26.95:0,27,277	0/0:16,0:10:10.39:0,10,185	0/0:15,0:15:30.01:0,30,357	0/0:16,0:16:41.99:0,42,470	0/0:23,0:22:56.89:0,57,648	0/0:7,0:7:15.05:0,15,191
chr10	38966507	.	C	CA	2006.63	PASS	AB=0.811;AC=19;AF=0.339;AN=56;BaseQRankSum=-7.652;DP=507;FS=0.507;HRun=9;HaplotypeScore=157.9737;InbreedingCoeff=0.6927;MQ=39.24;MQ0=40;MQRankSum=-0.708;QD=9.74;ReadPosRankSum=-6.487;VQSLOD=-0.5700;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:22:11.67:0,12,43	0/0:12,0:12:15.70:0,16,64	0/0:17,0:7:20.54:0,21,157	0/0:16,0:3:3.06:0,3,47	0/0:20,0:18:4.07:0,4,12	0/0:15,0:15:13.92:0,14,41	0/0:20,0:17:14.42:0,14,43	0/1:16,8:26:1.85:268,0,2	0/0:23,0:21:16.31:0,16,48	0/0:17,0:15:14.50:0,14,43	0/1:9,0:7:0.04:0,0,5	1/1:16,0:13:19.82:132,20,0	0/0:7,0:6:5.67:0,6,16	0/0:10,0:10:8.42:0,8,27	0/0:20,0:18:12.06:0,12,53	0/0:16,0:16:10.87:0,11,32	0/0:34,0:30:16.28:0,16,49	0/0:11,0:5:3.62:0,4,11	1/1:8,8:17:16.98:224,17,0	1/1:10,8:19:12.24:267,12,0	0/1:8,5:10:40.93:48,0,41	0/0:19,0:17:14.49:0,14,43	1/1:22,0:19:18.31:133,18,0	1/1:23,0:17:16:98,16,0	0/0:15,0:15:23.96:0,24,208	1/1:5,15:22:23.15:405,23,0	1/1:12,16:27:39.52:559,40,0	1/1:5,3:7:6.40:66,6,0
chr10	38966508	.	AAAAAAAAACAAACAAACAAAC	A	12544.53	PASS	AB=0.962;AC=28;AF=0.500;AN=56;BaseQRankSum=11.083;DP=501;FS=1.547;HRun=0;HaplotypeScore=264.5202;InbreedingCoeff=0.7956;MQ=38.95;MQ0=40;MQRankSum=-4.364;QD=49.19;ReadPosRankSum=8.425;VQSLOD=2.9118;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:20:36.12:1460,36,0	0/1:11,1:12:99:918,0,268	0/0:17,0:7:21.07:0,21,1292	0/0:16,0:3:9.03:0,9,580	1/1:19,1:18:26.54:671,27,0	1/1:14,1:15:24.08:1070,24,0	1/1:19,1:17:24.06:1071,24,0	0/0:29,0:28:60.63:0,61,3122	1/1:22,1:21:27.09:1181,27,0	1/1:16,0:14:24.08:1033,24,0	1/1:8,0:6:9.03:386,9,0	0/0:18,0:15:36.01:0,36,1434	1/1:5,0:4:9.03:366,9,0	1/1:11,0:10:12.04:433,12,0	0/1:19,0:17:99:627,0,216	1/1:15,1:16:18.06:813,18,0	1/1:34,0:30:30.06:1181,30,0	1/1:11,0:5:6.02:258,6,0	0/0:17,0:16:42.06:0,42,2106	0/0:20,0:19:45.11:0,45,2600	0/0:13,0:10:21.03:0,21,1532	1/1:19,0:17:27.09:1077,27,0	0/0:20,0:17:19.62:0,20,977	0/0:23,0:17:30.55:0,31,1088	0/0:15,0:15:22.74:0,23,2209	0/0:22,0:22:57.10:0,57,3503	0/0:28,0:27:69.80:0,70,4425	0/0:8,0:7:5.96:0,6,490
chr10	38966509	.	AAAAAAAACAAACAAACAAAC	A	15406.55	PASS	AB=0.744;AC=29;AF=0.518;AN=56;BaseQRankSum=7.990;DP=504;FS=2.158;HRun=0;HaplotypeScore=248.1946;InbreedingCoeff=0.7458;MQ=38.89;MQ0=40;MQRankSum=-4.133;QD=58.36;ReadPosRankSum=7.969;VQSLOD=3.4568;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:14,12:20:39.09:1863,39,0	0/1:4,8:12:99:1085,0,254	0/0:17,0:7:21.07:0,21,1317	0/0:16,0:3:9.03:0,9,561	1/1:9,11:18:26.87:845,27,0	1/1:8,7:15:24.08:1270,24,0	1/1:13,7:17:24.08:1270,24,0	0/0:29,0:28:60.13:0,60,2932	1/1:9,14:21:27.09:1394,27,0	1/1:8,8:14:24.08:1288,24,0	1/1:5,3:6:9.03:482,9,0	0/0:17,0:15:36.01:0,36,1311	1/1:4,2:5:12.01:466,12,0	1/1:8,3:10:11.95:557,12,0	0/1:8,11:17:99:787,0,202	1/1:5,11:16:18.06:948,18,0	1/1:13,21:30:30.06:1469,30,0	1/1:9,2:5:6.02:322,6,0	0/0:18,0:17:39.56:0,40,2046	0/0:19,0:18:42.11:0,42,2395	0/0:13,0:10:18.04:0,18,1428	1/1:9,10:17:27.09:1347,27,0	0/0:20,0:18:19.61:0,20,932	0/0:22,0:16:30.55:0,31,992	0/0:16,0:16:26.25:0,26,2258	0/0:23,0:23:54.12:0,54,3359	0/0:28,0:27:64.05:0,64,4117	0/1:8,0:7:12.24:12,0,453
chr10	38966513	.	A	AC	551.24	PASS	AB=0.939;AC=10;AF=0.179;AN=56;BaseQRankSum=-1.510;DP=539;FS=0.494;HRun=0;HaplotypeScore=186.5487;InbreedingCoeff=0.1910;MQ=39.38;MQ0=41;MQRankSum=1.472;QD=2.87;ReadPosRankSum=1.283;VQSLOD=3.1433;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:29:57.61:0,58,281	0/0:12,0:12:28.17:0,28,166	0/0:17,0:7:20.99:0,21,251	0/0:17,0:4:10.27:0,10,113	0/0:18,0:16:17.35:0,17,103	0/0:17,0:17:38.21:0,38,199	0/0:19,0:16:45.69:0,46,255	0/1:34,0:33:5.34:5,0,340	0/0:23,0:21:36.46:0,36,190	0/0:17,0:15:40.30:0,40,226	0/0:10,0:9:15.52:0,16,77	0/1:9,12:18:32.60:196,0,33	0/0:10,0:9:12.15:0,12,58	0/0:15,0:15:26.79:0,27,154	0/0:16,0:14:22.68:0,23,142	0/0:15,0:15:25.38:0,25,132	0/0:34,0:30:43.46:0,43,229	0/0:16,0:10:19.78:0,20,113	0/1:20,0:18:15.42:15,0,170	0/1:20,0:19:28.61:29,0,188	0/0:13,0:10:7.78:0,8,164	0/0:19,0:17:34.30:0,34,176	1/1:8,16:21:21.36:215,21,0	1/1:16,6:16:4.62:109,5,0	0/0:16,0:16:33.01:0,33,409	0/1:24,0:24:45.14:45,0,124	0/1:27,0:26:78.04:83,0,78	0/0:8,0:7:1.74:0,2,58
chr10	38966516	.	AC	A	3143.54	PASS	AB=0.985;AC=46;AF=0.821;AN=56;BaseQRankSum=5.581;DP=475;FS=1.261;HRun=1;HaplotypeScore=160.8825;InbreedingCoeff=0.2797;MQ=41.45;MQ0=40;MQRankSum=-3.014;QD=7.18;ReadPosRankSum=1.449;VQSLOD=0.8622;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:25:52.35:261,52,0	0/1:10,0:10:17.49:58,0,17	0/0:18,0:7:20.92:0,21,233	0/1:18,0:5:10.43:10,0,69	1/1:14,1:13:19.72:102,20,0	1/1:12,0:12:30.24:141,30,0	1/1:9,1:9:24.39:111,24,0	1/1:30,1:30:39.43:330,39,0	1/1:18,0:16:24.17:103,24,0	1/1:15,0:13:33.16:162,33,0	1/1:8,0:7:16.97:87,17,0	0/1:19,1:17:61.08:61,0,81	1/1:11,0:10:22.70:123,23,0	1/1:10,0:10:18.71:92,19,0	0/1:14,0:12:20.85:41,0,21	1/1:12,0:12:16.07:68,16,0	1/1:25,0:22:30.03:142,30,0	1/1:13,0:8:16.84:101,17,0	1/1:21,0:19:43.88:288,44,0	1/1:21,0:20:38.67:244,39,0	1/1:13,0:10:2.10:28,2,0	1/1:15,0:13:27.38:128,27,0	0/1:21,0:19:6.70:7,0,79	0/1:22,1:17:23.01:44,0,23	0/0:18,0:18:39.04:0,39,439	1/1:22,0:22:46.38:242,46,0	1/1:25,1:25:47.54:254,48,0	1/1:7,0:6:11.83:76,12,0
chr10	38966520	.	AC	A	1025.78	PASS	AB=0.978;AC=32;AF=0.571;AN=56;BaseQRankSum=12.988;DP=489;FS=9.631;HRun=1;HaplotypeScore=170.3776;InbreedingCoeff=0.5447;MQ=42.71;MQ0=36;MQRankSum=-8.077;QD=3.29;ReadPosRankSum=3.494;VQSLOD=-0.3339;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:25:45.74:191,46,0	0/1:10,0:10:27.32:30,0,27	0/0:19,0:7:20.98:0,21,281	0/0:20,0:7:3.03:0,3,126	1/1:15,0:14:20.44:91,20,0	1/1:12,0:12:25.12:91,25,0	1/1:14,0:13:18.26:57,18,0	0/0:33,0:31:43.15:0,43,436	1/1:16,0:16:19.98:63,20,0	1/1:17,0:15:28.79:104,29,0	1/1:10,0:9:18.30:80,18,0	0/1:20,1:18:92.69:93,0,197	1/1:11,0:10:18.14:81,18,0	1/1:12,0:12:14.88:50,15,0	0/1:14,0:12:20.93:21,0,31	1/1:12,0:12:13.32:42,13,0	1/1:25,0:22:25.73:93,26,0	1/1:16,0:11:11.60:33,12,0	0/1:21,0:19:3.20:3,0,223	0/0:23,0:22:38.01:0,38,421	0/0:11,0:9:17.97:0,18,202	1/1:15,0:13:19.58:61,20,0	0/1:20,1:19:6.35:6,0,222	0/1:22,1:17:39.36:39,0,81	0/0:18,0:18:42.13:0,42,621	0/0:21,0:21:42.91:0,43,428	0/0:27,1:27:54.89:0,55,506	0/0:4,0:3:5.98:0,6,46
chr10	38966524	.	AC	A	819.19	PASS	AB=0.977;AC=31;AF=0.554;AN=56;BaseQRankSum=13.777;DP=520;FS=7.255;HRun=1;HaplotypeScore=175.2433;InbreedingCoeff=0.4490;MQ=47.15;MQ0=33;MQRankSum=-8.683;QD=2.50;ReadPosRankSum=6.045;VQSLOD=-0.4855;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:27:36.10:111,36,0	0/1:10,0:10:27.18:31,0,27	0/0:22,0:10:26.64:0,27,317	0/1:20,0:7:16.95:17,0,130	1/1:14,0:13:12.11:33,12,0	1/1:14,0:14:23.43:72,23,0	1/1:16,0:15:12.50:49,13,0	0/0:35,0:33:64.66:0,65,833	1/1:16,0:16:19.98:63,20,0	1/1:19,0:17:6.45:51,6,0	1/1:11,0:10:10.61:34,11,0	0/1:20,1:18:99:108,0,159	1/1:12,0:12:8.85:36,9,0	1/1:14,0:14:4.58:32,5,0	0/1:14,0:12:3.91:21,0,4	1/1:12,0:12:13.32:42,13,0	1/1:25,0:22:23.84:74,24,0	0/1:18,0:15:11.45:16,0,11	0/0:22,0:20:35.66:0,36,541	0/0:25,0:24:64.95:0,65,781	0/0:14,0:12:27.04:0,27,346	1/1:14,0:13:15.09:52,15,0	0/1:20,3:21:82.43:82,0,141	0/1:25,0:19:47.04:96,0,47	0/0:18,0:18:45.13:0,45,661	0/0:20,0:20:60.01:0,60,784	0/0:31,0:30:77.72:0,78,958	0/0:5,0:4:6.02:0,6,92
chr10	38966527	.	AAC	A	3639.06	PASS	AB=1.000;AC=32;AF=0.571;AN=56;BaseQRankSum=12.160;DP=514;FS=8.967;HRun=0;HaplotypeScore=171.9798;InbreedingCoeff=0.6876;MQ=47.77;MQ0=25;MQRankSum=-8.152;QD=11.82;ReadPosRankSum=5.036;VQSLOD=2.8837;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:15,14:27:58.89:528,59,0	0/1:10,0:10:27.73:83,0,28	0/0:19,0:9:24.75:0,25,316	0/0:19,0:8:17.88:0,18,212	1/1:13,0:13:29.78:324,30,0	1/1:8,6:14:32.22:251,32,0	1/1:8,7:15:29.13:184,29,0	0/0:34,0:32:53.23:0,53,660	1/1:16,0:16:25.89:138,26,0	1/1:10,10:18:53.16:522,53,0	1/1:4,7:11:26.49:249,26,0	0/1:21,0:18:62.14:78,0,62	1/1:5,8:12:18.08:212,18,0	1/1:6,9:15:26.28:225,26,0	1/1:14,0:12:14.38:77,14,0	1/1:12,0:12:17.30:93,17,0	1/1:24,0:22:34.01:179,34,0	1/1:7,12:16:9.22:189,9,0	0/0:22,0:20:44.03:0,44,434	0/0:23,0:23:59.86:0,60,647	0/0:14,0:12:27.04:0,27,368	1/1:14,0:13:22.93:159,23,0	0/1:23,0:21:44.99:47,0,45	0/1:25,0:19:13.36:103,0,13	0/0:17,0:17:45.08:0,45,688	0/0:20,0:20:54.93:0,55,719	0/0:31,0:30:82.72:0,83,1023	0/0:6,0:5:8.72:0,9,130
chr10	38966528	.	AC	A	2250.11	PASS	AB=0.989;AC=34;AF=0.607;AN=56;BaseQRankSum=12.918;DP=515;FS=11.874;HRun=1;HaplotypeScore=169.6443;InbreedingCoeff=0.6691;MQ=47.92;MQ0=24;MQRankSum=-8.807;QD=6.92;ReadPosRankSum=4.073;VQSLOD=-0.3013;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:28,1:27:53:310,53,0	0/1:10,0:10:20.14:37,0,20	0/0:20,0:9:18.99:0,19,261	0/1:18,0:8:11.72:12,0,136	1/1:13,0:13:27.49:219,27,0	1/1:14,0:14:27.96:144,28,0	1/1:15,0:15:24.88:105,25,0	0/0:36,0:34:37.66:0,38,575	1/1:16,0:16:21.94:80,22,0	1/1:20,0:18:48.87:323,49,0	1/1:11,0:11:24.26:147,24,0	0/1:20,1:18:42.43:117,0,42	1/1:12,1:12:22.51:140,23,0	1/1:14,1:15:22.70:151,23,0	1/1:13,1:12:14.82:60,15,0	1/1:12,0:12:14.23:48,14,0	1/1:22,2:22:30.33:166,30,0	1/1:19,0:16:15.52:106,16,0	0/0:23,0:21:30.35:0,30,381	0/0:22,0:22:45.12:0,45,531	0/0:14,0:12:26.11:0,26,302	1/1:14,0:13:19.19:88,19,0	0/1:23,0:21:22.04:99,0,22	1/1:24,0:19:4.75:111,5,0	0/0:18,0:18:45.06:0,45,562	0/0:20,0:20:52.51:0,53,578	0/0:31,0:30:60.05:0,60,810	0/0:6,0:5:8.78:0,9,97
chr10	38967946	.	G	GCTTTTT	11253.81	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=9.855;DP=564;FS=23.523;HRun=0;HaplotypeScore=161.1150;InbreedingCoeff=0.9569;MQ=57.70;MQ0=1;MQRankSum=-12.191;QD=35.17;ReadPosRankSum=-0.836;VQSLOD=2.9854;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:22:36.04:481,36,0	1/1:11,4:15:30.10:761,30,0	0/0:10,0:9:9.03:0,9,143	0/0:12,0:7:11.91:0,12,184	1/1:26,1:27:48.11:968,48,0	1/1:18,0:17:36.07:497,36,0	1/1:17,0:16:23.99:409,24,0	0/0:29,0:29:27.06:0,27,476	1/1:19,2:21:60.19:1366,60,0	1/1:32,0:31:66.12:882,66,0	1/1:27,0:27:50.91:577,51,0	0/0:6,0:6:12.04:0,12,246	1/1:23,0:22:42:505,42,0	1/1:15,0:15:30:311,30,0	1/1:19,4:23:52.60:1198,53,0	1/1:13,2:15:34.93:820,35,0	1/1:21,0:21:48.16:1225,48,0	1/1:18,0:18:21.04:227,21,0	0/0:27,0:27:54.13:0,54,889	0/0:22,0:22:48.14:0,48,833	0/0:9,0:9:3.01:0,3,62	1/1:26,0:26:45.15:1027,45,0	0/0:25,0:25:57.16:0,57,967	0/0:13,0:13:17.89:0,18,286	0/0:18,0:18:30.10:0,30,575	0/0:27,0:27:50.45:0,50,877	0/0:31,0:31:60.17:0,60,940	0/0:14,0:14:33.05:0,33,475
chr10	38967965	.	C	CTT	6519.73	PASS	AB=0.892;AC=17;AF=0.304;AN=56;BaseQRankSum=8.551;DP=589;FS=24.349;HRun=5;HaplotypeScore=145.5276;InbreedingCoeff=-0.1917;MQ=48.91;MQ0=11;MQRankSum=-6.234;QD=19.64;ReadPosRankSum=3.524;VQSLOD=1.6461;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:21,0:20:99:186,0,173	0/1:12,3:15:36.53:365,0,37	0/0:15,0:6:9.03:0,9,120	0/0:15,0:6:14.01:0,14,150	1/1:16,14:30:4.01:654,4,0	0/1:20,0:19:38.32:352,0,38	0/1:22,0:21:80.02:80,0,176	0/0:21,0:21:39.94:0,40,486	1/1:12,12:23:3.57:860,4,0	0/1:28,0:27:99:364,0,151	0/1:22,0:21:83.16:310,0,83	0/0:10,0:10:10.04:0,10,198	0/1:21,0:20:58.90:288,0,59	0/1:16,0:16:99:187,0,112	0/1:24,7:31:43.86:809,0,44	0/1:8,9:16:50.34:497,0,50	0/1:14,10:24:68.79:658,0,69	0/1:17,0:16:99:130,0,125	0/0:32,0:31:55.28:0,55,960	0/0:27,0:28:56.59:0,57,726	0/0:2,0:2:6.02:0,6,83	0/1:10,13:23:30.40:781,0,30	0/0:29,0:29:68.90:0,69,880	0/0:12,0:11:21.36:0,21,263	0/0:20,0:19:53.95:0,54,669	0/0:29,0:27:59.97:0,60,789	0/0:30,0:30:67.98:0,68,958	0/0:13,0:13:18.70:0,19,401
chr10	38967967	.	TTC	T	5565.95	PASS	AB=0.773;AC=15;AF=0.268;AN=56;BaseQRankSum=7.888;DP=589;FS=31.855;HRun=0;HaplotypeScore=138.1602;InbreedingCoeff=-0.3404;MQ=49.50;MQ0=11;MQRankSum=-6.743;QD=16.82;ReadPosRankSum=0.552;VQSLOD=2.7414;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:15,7:21:99:352,0,274	0/1:12,3:15:63.11:94,0,63	0/0:15,0:6:6.70:0,7,149	0/0:17,0:7:14.11:0,14,191	0/1:25,6:31:71.40:433,0,71	0/1:15,7:20:18.57:472,0,19	0/1:10,10:19:99:232,0,199	0/0:21,0:21:15.05:0,15,641	0/1:22,3:24:4.15:350,0,4	0/1:14,15:28:99:739,0,244	0/1:6,13:18:99:515,0,148	0/0:11,0:11:20.86:0,21,324	0/1:7,11:17:83.92:482,0,84	0/1:8,8:16:99:350,0,145	0/1:24,5:29:99:337,0,148	0/1:17,0:16:99:148,0,130	0/1:23,2:25:99:379,0,99	0/1:8,13:20:99:252,0,165	0/0:32,0:31:45.13:0,45,1275	0/0:27,0:27:37.97:0,38,976	0/0:2,0:2:6.02:0,6,113	0/1:20,2:22:70.94:432,0,71	0/0:30,0:30:61.71:0,62,1167	0/0:12,0:11:24.88:0,25,371	0/0:21,0:20:56.79:0,57,880	0/0:28,0:26:52.31:0,52,1109	0/0:29,0:29:73.56:0,74,1285	0/0:13,0:13:17.24:0,17,539
chr10	38967978	.	T	TC	1846.55	PASS	AB=0.889;AC=20;AF=0.357;AN=56;BaseQRankSum=9.766;DP=583;FS=0.756;HRun=0;HaplotypeScore=146.1078;InbreedingCoeff=0.2003;MQ=51.68;MQ0=15;MQRankSum=-9.218;QD=5.63;ReadPosRankSum=8.333;VQSLOD=3.0740;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:23,3:25:42.83:158,0,43	0/1:10,7:17:20.35:107,0,20	0/0:24,0:6:11.20:0,11,90	0/0:27,0:11:2.35:0,2,71	0/1:30,5:35:82.10:82,0,176	0/1:18,2:20:58.05:136,0,58	1/1:16,0:16:8.34:137,8,0	0/0:19,0:18:46.61:0,47,378	1/1:19,4:22:3.90:77,4,0	1/1:27,4:30:32.71:380,33,0	1/1:16,2:17:27.75:234,28,0	0/0:13,0:13:32.18:0,32,241	0/1:16,1:16:33.39:166,0,33	0/1:14,0:14:10.53:118,0,11	0/1:24,4:28:74.67:112,0,75	0/1:11,4:13:1.97:86,0,2	0/1:22,1:23:20.30:20,0,72	1/1:19,1:19:32.60:205,33,0	0/0:23,0:22:62.80:0,63,446	0/0:24,0:24:60.48:0,60,463	0/0:3,0:3:8.97:0,9,76	0/1:22,0:22:10.05:10,0,50	0/0:21,0:21:54.78:0,55,388	0/0:13,0:12:26.53:0,27,192	0/0:18,0:17:44.79:0,45,386	0/0:29,0:27:68.69:0,69,476	0/0:23,0:23:57.42:0,57,409	0/0:17,0:17:43.98:0,44,315
chr10	38967979	.	T	TTTTC	3133.29	PASS	AB=0.995;AC=22;AF=0.393;AN=56;BaseQRankSum=13.077;DP=587;FS=2.568;HRun=0;HaplotypeScore=171.6222;InbreedingCoeff=0.4430;MQ=50.51;MQ0=15;MQRankSum=-6.305;QD=9.41;ReadPosRankSum=9.331;VQSLOD=2.1109;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:24,3:26:34.37:394,34,0	1/1:16,0:16:12.72:208,13,0	0/0:24,0:6:11.31:0,11,84	0/0:28,0:10:8.03:0,8,85	0/1:36,0:36:62.21:171,0,62	0/1:22,1:21:81.44:155,0,81	0/1:17,0:16:5.32:183,0,5	0/0:19,0:18:34.72:0,35,268	1/1:23,0:22:46.08:315,46,0	1/1:28,3:30:61.93:535,62,0	1/1:17,1:17:28.56:247,29,0	0/0:13,0:13:29.14:0,29,208	1/1:18,0:17:20.36:161,20,0	0/1:14,0:14:27.74:96,0,28	0/1:28,0:28:47.16:183,0,47	0/1:16,0:14:0.01:177,0,0	0/1:25,0:25:21.51:165,0,22	1/1:18,1:19:17.58:201,18,0	0/0:24,0:23:52:0,52,360	0/0:24,0:24:53.43:0,53,444	0/0:3,0:3:8.65:0,9,58	0/1:21,0:21:1.27:138,0,1	0/0:20,0:20:43.61:0,44,328	0/0:13,0:12:6.44:0,6,121	0/0:18,0:17:47.81:0,48,446	0/0:29,0:27:27.49:0,27,287	0/0:23,0:23:22.43:0,22,319	0/0:16,0:16:6.40:0,6,187
chr10	38967982	.	T	TTTTTTTC	3852.45	PASS	AB=0.903;AC=15;AF=0.268;AN=56;BaseQRankSum=0.636;DP=583;FS=4.165;HRun=0;HaplotypeScore=200.6374;InbreedingCoeff=-0.2105;MQ=50.84;MQ0=14;MQRankSum=0.167;QD=12.31;ReadPosRankSum=6.166;VQSLOD=2.1654;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:26:97.63:98,0,114	1/1:8,6:16:12.99:758,13,0	0/0:24,0:7:6.68:0,7,59	0/0:27,0:9:6.19:0,6,39	0/1:25,5:36:42.94:856,0,43	0/1:24,0:22:40.13:40,0,196	0/1:17,0:16:82.69:83,0,83	0/0:19,0:18:28.35:0,28,260	0/1:13,4:23:87.32:542,0,87	0/1:32,0:31:6.50:7,0,171	0/0:18,0:17:10.38:0,10,112	0/0:12,0:12:17.56:0,18,119	0/0:16,0:15:22.86:0,23,137	0/0:14,0:14:0.02:0,0,118	0/1:18,4:26:27.88:617,0,28	0/1:13,4:15:48.70:386,0,49	0/1:19,1:23:71.25:274,0,71	0/1:20,0:19:27.20:27,0,90	0/0:25,0:24:33.62:0,34,246	0/0:24,0:24:46.10:0,46,373	0/0:3,0:3:8.64:0,9,58	0/1:15,0:18:80.19:162,0,80	0/0:20,0:20:24.94:0,25,265	0/1:13,0:12:2.63:3,0,59	0/0:18,0:17:44.53:0,45,413	0/0:27,0:25:11.14:0,11,226	0/0:23,0:23:3.24:0,3,206	0/1:20,0:20:0.72:1,0,259
chr10	38968340	.	T	TTTTG	15463.67	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-14.514;DP=710;FS=14.302;HRun=0;HaplotypeScore=99.7711;InbreedingCoeff=0.9923;MQ=67.57;MQ0=16;MQRankSum=0.960;QD=46.58;ReadPosRankSum=4.117;VQSLOD=4.4617;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,27:32:38.65:1284,39,0	1/1:2,12:14:33.11:792,33,0	0/0:67,0:33:16.36:0,16,472	0/0:73,0:29:35.54:0,36,507	1/1:3,18:22:48.16:1066,48,0	1/1:4,20:24:36.12:907,36,0	1/1:3,15:18:10.83:805,11,0	0/0:22,0:22:35.77:0,36,540	1/1:4,12:16:27.09:672,27,0	1/1:3,20:26:66.18:1468,66,0	1/1:0,17:17:45.15:934,45,0	0/0:16,0:16:45.15:0,45,777	1/1:3,21:23:27.09:681,27,0	1/1:2,18:20:45.15:1134,45,0	1/1:3,22:25:51.17:1285,51,0	1/1:3,22:26:45.15:1134,45,0	1/1:6,27:36:69.24:1724,69,0	1/1:5,12:17:30.10:747,30,0	0/0:24,0:23:66.20:0,66,1098	0/0:17,0:17:39.13:0,39,671	0/0:25,0:24:57.18:0,57,951	1/1:1,12:14:33.11:830,33,0	0/0:24,0:24:69.24:0,69,1180	0/0:22,0:22:63.22:0,63,1084	0/0:19,0:19:51.15:0,51,810	0/0:31,0:30:72.25:0,72,1246	0/0:28,0:28:75.24:0,75,1271	0/0:10,0:10:27.09:0,27,457
chr10	38968604	.	GCC	G	2302.34	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.632;DP=525;FS=16.064;HRun=2;HaplotypeScore=62.1569;InbreedingCoeff=0.9780;MQ=72.30;MQ0=3;MQRankSum=-0.212;QD=40.39;ReadPosRankSum=2.143;VQSLOD=2.3638;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:99:0,99,1931	0/0:8,0:8:24.08:0,24,487	0/0:15,0:12:29.46:0,29,598	0/0:22,0:21:53.35:0,53,1036	0/0:12,0:12:36.12:0,36,720	0/0:18,0:18:54.19:0,54,1096	0/0:17,0:17:51.18:0,51,1036	0/0:20,0:20:54.19:0,54,1090	0/0:18,0:18:54.19:0,54,1093	0/0:20,0:20:60.20:0,60,1161	0/0:16,0:16:48.16:0,48,975	1/1:0,23:23:60.20:978,60,0	0/0:12,0:12:36.12:0,36,731	0/0:22,0:22:66.18:0,66,1210	0/0:16,0:16:48.16:0,48,975	0/0:10,0:10:30.10:0,30,609	0/0:37,0:37:99:0,111,2182	0/0:23,0:23:66.19:0,66,1266	0/0:28,0:28:84.19:0,84,1618	0/0:18,0:18:54.19:0,54,1084	0/0:33,0:33:99:0,99,1879	0/0:3,0:3:9.03:0,9,182	1/1:1,9:10:27.09:441,27,0	1/1:0,24:24:63.22:1027,63,0	0/0:12,0:12:36.12:0,36,699	0/0:17,0:17:51.16:0,51,994	0/0:24,0:24:72.25:0,72,1445	0/0:14,0:14:42.14:0,42,849
chr10	38969197	.	C	CA	12377.73	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-4.601;DP=510;FS=10.084;HRun=1;HaplotypeScore=63.8144;InbreedingCoeff=0.9931;MQ=66.81;MQ0=0;MQRankSum=1.008;QD=37.62;ReadPosRankSum=4.055;VQSLOD=4.9218;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,26:28:69.17:1034,69,0	1/1:0,10:10:27.09:405,27,0	0/0:20,0:21:60.19:0,60,777	0/0:25,0:24:60.11:0,60,735	1/1:1,20:21:48.11:719,48,0	1/1:1,13:14:39.13:585,39,0	1/1:2,11:13:24.08:360,24,0	0/0:17,0:17:45.15:0,45,584	1/1:1,28:29:72.24:1079,72,0	1/1:0,23:23:60.19:880,60,0	1/1:1,6:7:18.01:269,18,0	1/1:1,20:21:45.15:669,45,0	1/1:0,20:20:42.14:629,42,0	1/1:0,14:14:36.12:540,36,0	1/1:0,19:19:51.17:764,51,0	1/1:1,20:21:54.18:809,54,0	1/1:0,23:23:69.23:1034,69,0	1/1:0,17:17:48.16:719,48,0	0/0:11,0:11:27.09:0,27,346	0/0:13,0:13:30.08:0,30,375	0/0:32,0:32:72.23:0,72,934	1/1:1,8:9:24.04:335,24,0	1/1:1,11:12:30.06:423,30,0	1/1:2,26:28:75.25:1124,75,0	0/0:15,0:15:45.15:0,45,584	0/0:17,0:17:45.14:0,45,584	0/0:26,0:26:75.23:0,75,956	0/0:4,0:4:12.04:0,12,156
chr10	38969567	.	TTTAA	T	3174.17	PASS	AB=0.693;AC=14;AF=0.259;AN=54;BaseQRankSum=9.418;DP=494;FS=68.431;HRun=0;HaplotypeScore=94.0276;InbreedingCoeff=-0.3570;MQ=46.77;MQ0=17;MQRankSum=-7.526;QD=13.34;ReadPosRankSum=4.491;VQSLOD=0.6439;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:12,12:24:99:245,0,675	./.	0/0:28,0:13:32.16:0,32,819	0/0:28,0:11:33.07:0,33,711	0/0:20,7:25:45.15:0,45,1217	0/1:2,14:16:99:472,0,131	0/0:8,5:13:24.08:0,24,594	0/0:27,0:26:75.22:0,75,1862	0/1:16,5:21:99:178,0,1045	0/1:11,11:22:99:576,0,757	0/0:12,6:18:33.11:0,33,884	0/1:9,2:10:31.02:31,0,578	0/1:9,11:18:99:355,0,295	0/1:6,7:11:99:208,0,292	0/1:5,1:6:39.73:40,0,380	0/1:4,5:8:99:266,0,143	0/1:11,10:21:99:184,0,857	0/1:7,7:14:99:365,0,419	0/0:12,0:11:27.09:0,27,739	0/0:18,0:18:54.19:0,54,1425	0/0:17,0:17:45.15:0,45,1233	0/1:6,13:19:99:202,0,361	0/1:10,14:24:99:168,0,631	0/1:13,4:17:37.04:37,0,416	0/0:13,0:13:36.12:0,36,933	0/0:30,0:30:87.29:0,87,2329	0/0:21,0:21:60.21:0,60,1622	0/0:2,0:2:6.02:0,6,164
chr10	38969770	.	AAGCCACACCTAC	A	16946.13	PASS	AB=0.662;AC=28;AF=0.560;AN=50;BaseQRankSum=13.608;DP=453;FS=1.319;HRun=0;HaplotypeScore=144.7857;InbreedingCoeff=0.5920;MQ=45.27;MQ0=8;MQRankSum=-13.123;QD=70.32;ReadPosRankSum=3.462;VQSLOD=4.6259;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,30:30:72.20:2473,72,0	./.	0/0:25,0:6:18.06:0,18,837	0/0:28,0:18:54.19:0,54,2795	./.	1/1:0,10:10:27.09:1068,27,0	1/1:1,19:19:51.17:1786,51,0	0/0:28,0:28:84.27:0,84,4390	1/1:2,12:14:36.12:1423,36,0	1/1:0,5:5:15.02:497,15,0	1/1:1,3:4:6.02:237,6,0	1/1:1,17:18:45.15:1777,45,0	1/1:2,17:19:48.16:1891,48,0	1/1:0,12:12:24.08:949,24,0	0/1:1,18:19:21.33:1891,0,21	1/1:2,9:11:1.12:691,1,0	0/1:3,14:16:96.67:945,0,97	0/1:4,6:10:99:573,0,103	0/0:26,0:21:57.20:0,57,2968	0/0:11,0:11:21.07:0,21,1296	0/0:56,0:55:99:0,160,9795	1/1:3,2:5:3.01:119,3,0	./.	1/1:4,17:21:18.53:570,19,0	0/0:14,0:14:33.11:0,33,1885	0/1:23,1:23:55.51:56,0,3682	0/0:11,0:11:33.11:0,33,1824	0/0:8,0:8:15.05:0,15,953
chr10	38969952	.	AGAGGGGG	A	321.64	PASS	AB=1.000;AC=18;AF=0.529;AN=34;BaseQRankSum=-3.013;DP=236;FS=0.000;HRun=0;HaplotypeScore=46.3138;InbreedingCoeff=0.4256;MQ=81.27;MQ0=16;MQRankSum=-0.795;QD=5.03;ReadPosRankSum=1.925;VQSLOD=0.7127;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:12,0:12:8.93:108,9,0	./.	0/0:43,0:12:3.13:0,3,31	0/0:68,0:25:10.62:0,11,58	./.	1/1:6,2:8:3.01:69,3,0	1/1:13,0:13:1.27:22,1,0	0/0:11,0:11:12.04:0,12,214	0/1:2,0:2:0:0,0,0	./.	1/1:3,2:5:3.01:69,3,0	./.	1/1:2,0:2:5.97:75,6,0	1/1:3,1:3:3.01:69,3,0	0/0:3,0:3:1.82:0,2,5	1/1:7,0:7:2.53:10,3,0	1/1:5,0:5:2.68:12,3,0	./.	./.	0/0:4,0:4:3.01:0,3,63	0/0:4,0:4:2.97:0,3,20	./.	./.	0/0:8,0:8:3.01:0,3,69	./.	0/1:5,0:5:0:0,0,0	./.	./.
chr10	38970104	.	TTTC	T	2928.13	PASS	AB=1.000;AC=32;AF=0.571;AN=56;BaseQRankSum=-3.380;DP=395;FS=8.361;HRun=0;HaplotypeScore=76.6155;InbreedingCoeff=0.8227;MQ=55.74;MQ0=6;MQRankSum=-3.967;QD=11.31;ReadPosRankSum=-3.665;VQSLOD=1.4594;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:36,4:40:19.77:378,20,0	1/1:5,0:5:8.95:74,9,0	0/0:17,0:10:19.92:0,20,197	0/0:9,0:9:20.76:0,21,230	1/1:15,0:15:34.80:234,35,0	1/1:11,0:11:26.15:191,26,0	1/1:16,2:18:39.98:347,40,0	0/0:28,0:28:72.14:0,72,1066	1/1:8,0:7:4.03:31,4,0	1/1:19,1:20:43.79:353,44,0	1/1:16,0:16:15.60:251,16,0	0/0:8,0:8:13.74:0,14,92	1/1:12,0:11:2.97:20,3,0	1/1:11,0:11:21.89:145,22,0	1/1:13,1:14:16.26:147,16,0	1/1:3,2:5:8.91:89,9,0	1/1:17,0:16:24.93:194,25,0	1/1:21,3:24:59.28:539,59,0	0/0:10,0:9:27.07:0,27,403	0/0:9,0:9:27.09:0,27,459	0/0:19,0:18:51.16:0,51,808	1/1:10,0:10:22.54:141,23,0	0/1:12,0:11:6.98:7,0,81	0/1:21,0:20:1.17:1,0,58	0/0:7,0:7:18.04:0,18,308	0/0:12,0:12:30.54:0,31,491	0/0:12,0:12:33.08:0,33,491	0/0:5,0:4:12:0,12,149
chr10	38970105	.	TTC	T	4842.35	PASS	AB=1.000;AC=33;AF=0.589;AN=56;BaseQRankSum=-4.719;DP=397;FS=4.724;HRun=0;HaplotypeScore=66.1949;InbreedingCoeff=0.7646;MQ=55.69;MQ0=6;MQRankSum=-4.279;QD=18.14;ReadPosRankSum=-4.587;VQSLOD=3.5225;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:37,4:41:95.44:779,95,0	1/1:0,5:5:8.99:110,9,0	0/0:17,0:10:13.23:0,13,163	0/0:9,0:9:20.63:0,21,186	1/1:14,1:15:40.71:348,41,0	1/1:11,0:11:29.74:228,30,0	1/1:9,9:18:48.02:573,48,0	0/0:28,0:28:72.11:0,72,863	1/1:6,2:7:14.69:107,15,0	1/1:19,1:20:50.64:444,51,0	1/1:14,2:16:42.10:399,42,0	0/1:7,0:7:12.09:13,0,12	1/1:1,10:10:2.97:20,3,0	1/1:11,0:11:28.64:207,29,0	1/1:4,9:13:20.99:234,21,0	1/1:2,3:5:8.94:96,9,0	1/1:17,1:17:40.32:319,40,0	1/1:21,4:25:65.07:652,65,0	0/0:10,0:9:27.07:0,27,330	0/0:9,0:9:27.09:0,27,362	0/0:20,0:19:51.10:0,51,632	1/1:8,2:10:28.81:275,29,0	0/1:12,0:11:14.94:22,0,15	0/1:21,0:20:1.78:19,0,2	0/0:7,0:7:18.04:0,18,236	0/0:12,0:12:29.19:0,29,395	0/0:13,0:13:33.07:0,33,400	0/0:5,0:4:12:0,12,127
chr10	38970106	.	TC	T	4732.64	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-2.703;DP=393;FS=5.782;HRun=1;HaplotypeScore=60.2762;InbreedingCoeff=0.9343;MQ=55.80;MQ0=6;MQRankSum=-4.672;QD=17.93;ReadPosRankSum=-4.756;VQSLOD=3.4048;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:40,0:40:99:789,109,0	1/1:5,0:5:8.98:80,9,0	0/0:17,0:10:12.51:0,13,137	0/0:9,0:9:20.56:0,21,162	1/1:13,1:14:40.92:334,41,0	1/1:11,1:12:29.87:251,30,0	1/1:17,1:18:47.90:411,48,0	0/0:26,0:26:72.07:0,72,694	1/1:8,0:7:14.69:107,15,0	1/1:18,1:19:50.77:452,51,0	1/1:14,2:16:45.02:419,45,0	1/1:7,0:7:15.45:75,15,0	1/1:11,0:10:2.97:20,3,0	1/1:11,0:11:28.86:208,29,0	1/1:12,1:13:20.95:177,21,0	1/1:5,0:5:8.93:75,9,0	1/1:12,6:17:40.62:318,41,0	1/1:23,2:25:71.29:582,71,0	0/0:11,0:10:26.99:0,27,270	0/0:9,0:9:27.06:0,27,278	0/0:20,0:19:50.96:0,51,486	1/1:8,2:10:29.02:246,29,0	1/1:11,0:10:17.29:94,17,0	1/1:18,3:20:18.16:93,18,0	0/0:7,0:7:18.02:0,18,182	0/0:12,0:12:13.05:0,13,289	0/0:13,0:13:32.97:0,33,312	0/0:5,0:4:11.99:0,12,107
chr10	38970211	.	CTTT	C	7344.72	PASS	AB=0.677;AC=36;AF=0.643;AN=56;BaseQRankSum=5.673;DP=388;FS=2.859;HRun=11;HaplotypeScore=93.3818;InbreedingCoeff=0.8074;MQ=51.80;MQ0=5;MQRankSum=-9.516;QD=27.30;ReadPosRankSum=1.808;VQSLOD=4.2419;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,26:29:60.12:766,60,0	1/1:2,3:5:9.03:118,9,0	0/0:11,0:8:22.31:0,22,316	0/0:11,0:6:15.30:0,15,204	1/1:0,7:7:20.81:203,21,0	1/1:3,17:20:57.18:748,57,0	1/1:5,17:20:42.12:552,42,0	0/0:4,0:22:55.09:0,55,456	1/1:0,11:11:33.11:433,33,0	0/1:5,2:7:37.95:99,0,38	1/1:5,8:14:32.76:344,33,0	1/1:6,7:13:26.99:333,27,0	1/1:5,11:16:39.09:511,39,0	1/1:1,19:20:51.17:668,51,0	1/1:7,15:22:57.08:704,57,0	1/1:6,7:13:33.10:433,33,0	1/1:5,9:14:39.06:491,39,0	1/1:6,5:11:17.95:212,18,0	0/0:4,0:15:32.84:0,33,250	0/0:2,0:9:19.18:0,19,141	0/0:3,0:19:47.84:0,48,387	1/1:2,4:6:17.89:191,18,0	1/1:6,5:10:24:293,24,0	1/1:4,9:11:18.05:236,18,0	0/0:7,0:7:18.06:0,18,355	0/1:4,1:15:9.51:10,0,177	0/0:1,0:21:41.86:0,42,343	0/0:0,0:1:2.99:0,3,23
chr10	38970234	.	TC	T	6623.47	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=9.351;DP=357;FS=4.750;HRun=2;HaplotypeScore=83.6873;InbreedingCoeff=0.8977;MQ=43.64;MQ0=7;MQRankSum=-6.767;QD=26.82;ReadPosRankSum=2.361;VQSLOD=4.6090;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,19:26:57.08:673,57,0	1/1:0,5:5:12.04:154,12,0	0/0:5,0:3:6.01:0,6,61	0/0:5,0:3:6.01:0,6,69	1/1:1,9:10:21.03:252,21,0	1/1:1,19:20:48.11:599,48,0	1/1:5,19:20:48.16:619,48,0	0/0:19,0:17:45.15:0,45,644	1/1:0,15:14:30.10:383,30,0	1/1:1,6:7:18.01:200,18,0	1/1:0,13:13:33.06:404,33,0	1/1:0,12:12:20.62:269,21,0	1/1:2,12:13:36.04:424,36,0	1/1:4,15:19:54.15:655,54,0	1/1:3,15:18:54.09:660,54,0	1/1:0,9:8:18.06:232,18,0	1/1:2,13:15:21.05:268,21,0	1/1:0,9:9:18.01:213,18,0	0/0:10,0:10:27.02:0,27,343	0/0:13,0:13:24.23:0,24,462	0/0:19,0:18:45.03:0,45,572	1/1:0,9:9:17.97:195,18,0	1/1:0,8:8:18.06:231,18,0	1/1:1,12:12:15.05:193,15,0	0/0:5,0:5:12.04:0,12,172	0/0:14,1:15:3.77:0,4,503	0/0:17,0:17:39.13:0,39,559	0/0:2,0:2:3.01:0,3,43
chr10	38971267	.	G	GA	10279.10	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-12.927;DP=549;FS=29.786;HRun=7;HaplotypeScore=50.5314;InbreedingCoeff=0.9934;MQ=61.97;MQ0=4;MQRankSum=-0.995;QD=29.12;ReadPosRankSum=4.446;VQSLOD=3.0113;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,40:42:93.29:1123,93,0	1/1:0,13:13:29.91:362,30,0	0/0:19,0:9:27.04:0,27,258	0/0:13,0:5:15:0,15,137	1/1:2,19:20:51.11:600,51,0	1/1:2,14:17:45:522,45,0	1/1:4,18:20:45.14:540,45,0	0/0:25,0:24:72.12:0,72,695	1/1:2,13:15:39.12:471,39,0	1/1:3,15:18:45.12:530,45,0	1/1:2,15:18:45.14:542,45,0	1/1:1,14:15:36.11:435,36,0	1/1:5,11:16:33.06:382,33,0	1/1:1,11:12:30.09:362,30,0	1/1:2,22:24:66.20:797,66,0	1/1:1,14:15:39.12:471,39,0	1/1:5,17:22:45.14:544,45,0	1/1:3,19:22:45.13:532,45,0	0/0:20,0:20:57.09:0,57,550	0/0:18,0:18:39.05:0,39,371	0/0:23,0:23:60.08:0,60,573	1/1:2,11:13:33.10:399,33,0	1/1:1,14:15:39.12:471,39,0	1/1:0,33:33:99:1196,99,0	0/0:21,0:21:57.08:0,57,545	0/0:29,3:32:14.65:0,15,705	0/0:18,0:18:51.08:0,51,492	0/0:7,0:7:18.03:0,18,174
chr10	38971343	.	C	CGT	5056.40	PASS	AB=0.796;AC=41;AF=0.788;AN=52;BaseQRankSum=1.919;DP=688;FS=2.377;HRun=0;HaplotypeScore=133.2146;InbreedingCoeff=0.3643;MQ=62.50;MQ0=16;MQRankSum=0.401;QD=9.29;ReadPosRankSum=-2.229;VQSLOD=4.1453;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:42,0:39:20.93:178,21,0	1/1:8,0:11:11.99:103,12,0	./.	./.	1/1:19,0:21:26.94:242,27,0	1/1:13,0:13:14.92:135,15,0	1/1:25,0:29:26.38:225,26,0	1/1:17,3:21:14.92:172,15,0	1/1:23,2:28:43.92:482,44,0	1/1:38,0:37:40.73:290,41,0	1/1:13,0:15:5.63:48,6,0	0/1:21,0:22:12.50:12,0,272	1/1:14,0:17:26.51:259,27,0	1/1:16,0:17:19.54:167,20,0	1/1:13,1:17:9.88:191,10,0	1/1:8,0:16:8.77:316,9,0	1/1:19,4:30:54:562,54,0	1/1:21,0:21:11.74:91,12,0	1/1:14,4:17:14.98:181,15,0	0/1:12,4:16:48.50:185,0,49	0/1:31,21:54:99:431,0,119	1/1:17,0:17:12.26:90,12,0	0/0:12,0:12:20.99:0,21,210	0/0:32,0:37:61.54:0,62,648	0/0:24,0:27:41.42:0,41,373	1/1:34,2:37:6.90:184,7,0	0/1:15,3:18:99:248,0,100	0/1:7,10:18:60.06:263,0,60
chr10	38971845	.	T	TGCGCGCGC	15126.62	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=13.829;DP=635;FS=1.717;HRun=0;HaplotypeScore=275.4766;InbreedingCoeff=0.9045;MQ=53.59;MQ0=2;MQRankSum=-14.350;QD=37.54;ReadPosRankSum=-0.575;VQSLOD=3.9445;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:28,11:39:27.08:874,27,0	1/1:6,0:6:3.01:103,3,0	0/0:22,0:16:29.75:0,30,830	0/0:26,0:18:36.42:0,36,932	1/1:30,0:30:17.31:337,17,0	1/1:12,16:28:57.20:2222,57,0	1/1:26,7:33:44.67:1504,45,0	0/0:29,0:29:81.25:0,81,2057	1/1:12,0:13:14.87:393,15,0	1/1:21,8:29:75.37:2004,75,0	1/1:12,4:16:18:560,18,0	1/1:17,2:22:21.06:617,21,0	1/1:16,7:23:42.11:1396,42,0	1/1:21,10:32:36.10:1407,36,0	1/1:19,0:19:24.06:528,24,0	1/1:15,0:15:15.04:379,15,0	1/1:27,0:27:8.29:464,8,0	1/1:12,9:21:48.01:1585,48,0	0/0:18,0:18:48.15:0,48,1236	0/0:26,0:26:75.20:0,75,1873	0/0:36,0:36:96.21:0,96,2302	1/1:18,0:20:24.04:547,24,0	1/1:4,2:16:2.73:112,3,0	1/1:12,0:13:3.01:93,3,0	0/0:22,0:22:66.16:0,66,1583	0/0:20,0:20:57.18:0,57,1498	0/0:23,0:23:60.21:0,60,1622	0/0:10,0:10:30.09:0,30,788
chr10	38971848	.	G	GCGCGCGCGCGCGCGCGCA	16434.90	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=13.290;DP=627;FS=10.338;HRun=0;HaplotypeScore=388.4063;InbreedingCoeff=0.9227;MQ=51.48;MQ0=3;MQRankSum=-14.000;QD=41.61;ReadPosRankSum=2.336;VQSLOD=2.4200;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:41,0:41:21.54:559,22,0	1/1:4,0:4:6.02:392,6,0	0/0:20,0:14:29.28:0,29,1504	0/0:26,0:18:41.25:0,41,1534	1/1:22,5:27:5.45:686,5,0	1/1:28,0:28:57.20:1381,57,0	1/1:34,0:33:47.53:1000,48,0	0/0:29,0:29:87.24:0,87,3763	1/1:11,1:13:10.91:1092,11,0	1/1:28,0:28:56.32:1129,56,0	1/1:18,0:18:17.58:305,18,0	1/1:23,0:23:21.06:991,21,0	1/1:22,0:22:44.84:761,45,0	1/1:30,0:30:39.11:790,39,0	1/1:16,2:18:15.42:1180,15,0	1/1:15,1:16:20.74:1096,21,0	1/1:25,2:26:40.46:2187,40,0	1/1:21,0:21:45.32:846,45,0	0/0:19,0:19:53.93:0,54,2205	0/0:26,0:26:75.23:0,75,3388	0/0:37,0:38:99:0,111,4223	1/1:12,5:19:21.44:1328,21,0	1/1:13,0:13:3.17:184,3,0	1/1:13,0:13:8.86:527,9,0	0/0:22,0:22:66.21:0,66,2847	0/0:20,0:20:57.18:0,57,2769	0/0:21,0:21:63.20:0,63,2978	0/0:11,0:11:33.08:0,33,1493
chr10	38971854	.	GCA	G	1430.95	PASS	AB=0.751;AC=22;AF=0.407;AN=54;BaseQRankSum=11.946;DP=631;FS=12.631;HRun=0;HaplotypeScore=232.7333;InbreedingCoeff=0.3810;MQ=52.42;MQ0=4;MQRankSum=-11.652;QD=4.47;ReadPosRankSum=3.474;VQSLOD=1.5333;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:30,10:39:4.50:80,0,4	./.	0/0:26,0:11:26.39:0,26,526	0/0:28,0:21:35.18:0,35,543	0/0:11,15:26:2.74:0,3,10	1/1:24,4:28:15.88:161,16,0	1/1:16,16:31:1.12:78,1,0	0/0:37,0:37:99:0,111,2119	1/1:6,8:14:5.30:22,5,0	0/1:20,8:28:99:336,0,101	0/1:11,6:17:20.35:69,0,20	1/1:19,3:22:10.02:94,10,0	0/1:12,8:20:35.11:95,0,35	1/1:16,13:29:16.23:117,16,0	1/1:7,8:15:4.48:21,4,0	1/1:6,7:13:2.92:17,3,0	0/1:17,12:28:7.69:273,0,8	0/1:14,6:20:26.02:215,0,26	0/0:22,0:22:66.23:0,66,1285	0/0:25,0:25:72.25:0,72,1396	0/0:38,0:38:99:0,114,2185	0/0:14,3:17:7.03:0,7,46	1/1:12,1:13:4.55:28,5,0	0/0:9,4:13:2.03:0,2,6	0/0:22,0:22:66.23:0,66,1291	0/0:21,1:22:44.97:0,45,1198	0/0:20,0:20:60.21:0,60,1166	0/0:10,0:10:29.77:0,30,556
chr10	38971856	.	A	AGCG	1439.31	PASS	AB=0.990;AC=26;AF=0.481;AN=54;BaseQRankSum=12.801;DP=593;FS=4.311;HRun=0;HaplotypeScore=236.8990;InbreedingCoeff=0.5321;MQ=53.79;MQ0=4;MQRankSum=-12.176;QD=4.95;ReadPosRankSum=4.985;VQSLOD=1.8598;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:33,0:32:20.68:139,21,0	./.	0/0:27,0:11:30.10:0,30,554	0/0:30,0:22:41.25:0,41,606	0/0:22,0:22:4.84:0,5,19	1/1:23,1:24:47.53:361,48,0	1/1:30,1:31:20.50:170,21,0	0/0:38,0:38:99:0,111,1917	1/1:11,0:11:5.70:51,6,0	0/1:23,1:24:37.52:209,0,38	1/1:19,0:19:0.96:41,1,0	0/1:20,0:20:16.43:44,0,16	1/1:20,0:20:12.94:129,13,0	1/1:25,0:25:9.20:110,9,0	0/1:12,0:12:4.26:16,0,4	1/1:9,0:9:2.96:19,3,0	0/1:17,0:16:26.93:27,0,34	1/1:20,1:21:19.98:288,20,0	0/0:22,0:22:66.21:0,66,1169	0/0:28,0:28:72.25:0,72,1321	0/0:40,0:41:99:0,112,2028	0/0:15,0:15:1.03:0,1,29	1/1:13,0:13:2.04:19,2,0	1/1:11,0:11:1.68:5,2,0	0/0:22,0:22:66.20:0,66,1186	0/0:22,0:22:66.14:0,66,1132	0/0:20,0:20:60.21:0,60,1114	0/0:9,0:10:30.10:0,30,536
chr10	38971859	.	T	TGC	4422.10	PASS	AB=0.924;AC=30;AF=0.556;AN=54;BaseQRankSum=13.758;DP=612;FS=0.881;HRun=0;HaplotypeScore=224.2484;InbreedingCoeff=0.5795;MQ=53.71;MQ0=5;MQRankSum=-12.843;QD=13.12;ReadPosRankSum=0.970;VQSLOD=4.6419;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:26,8:33:21.07:394,21,0	./.	0/0:30,0:12:29.51:0,30,363	0/0:31,0:21:15.70:0,16,223	1/1:17,5:22:6.73:36,7,0	1/1:10,16:26:48.16:787,48,0	1/1:28,7:34:12.77:357,13,0	0/0:41,0:41:99:0,120,1561	1/1:10,2:12:6.02:80,6,0	0/1:20,5:25:4.83:703,0,5	0/1:16,3:19:6.02:147,0,6	0/1:21,0:21:13.94:47,0,14	1/1:14,6:20:1.66:362,2,0	1/1:15,9:25:18.06:313,18,0	1/1:10,2:12:6.28:70,6,0	1/1:9,1:10:3.01:57,3,0	1/1:16,2:17:8.25:347,8,0	1/1:17,5:22:19.20:620,19,0	0/0:22,0:22:60.19:0,60,880	0/0:27,0:27:78.12:0,78,1038	0/0:42,0:42:99:0,123,1628	1/1:9,6:15:4.14:69,4,0	0/1:11,0:11:31.39:31,0,36	1/1:10,0:10:0.90:2,1,0	0/0:24,0:24:66.17:0,66,943	0/0:23,0:23:47.91:0,48,840	0/0:21,0:21:63.14:0,63,855	0/0:10,0:10:30.06:0,30,432
chr10	38972515	.	TA	T	10664.23	PASS	AB=0.526;AC=43;AF=0.768;AN=56;BaseQRankSum=6.860;DP=658;FS=0.459;HRun=11;HaplotypeScore=68.3808;InbreedingCoeff=0.9024;MQ=64.73;MQ0=0;MQRankSum=0.557;QD=19.57;ReadPosRankSum=1.738;VQSLOD=5.8788;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,37:39:92.88:764,93,0	0/1:1,9:10:5.02:170,0,5	0/0:13,0:10:8.20:0,8,111	0/0:14,0:10:12.13:0,12,107	1/1:0,27:27:71.90:591,72,0	1/1:4,15:19:38.94:320,39,0	1/1:1,26:27:77.91:640,78,0	1/1:9,22:31:62.84:508,63,0	1/1:0,26:26:68.92:567,69,0	1/1:11,18:29:56.81:457,57,0	1/1:2,20:22:56.71:445,57,0	0/0:20,0:20:39.05:0,39,402	1/1:4,17:21:44.93:369,45,0	1/1:3,17:20:47.94:394,48,0	1/1:1,25:26:65.92:542,66,0	1/1:3,18:23:52.97:425,53,0	1/1:0,11:11:32.96:271,33,0	1/1:1,34:35:95.88:788,96,0	1/1:4,16:21:49.96:400,50,0	1/1:3,23:27:61.89:493,62,0	1/1:6,34:41:91.92:745,92,0	1/1:5,15:20:41.93:345,42,0	0/0:23,0:23:57.10:0,57,595	0/0:25,1:26:38.52:0,39,615	0/0:15,0:15:36.08:0,36,378	1/1:3,27:31:82.89:662,83,0	1/1:4,22:27:61.95:498,62,0	1/1:0,12:12:32.96:271,33,0
chr10	38972697	.	TCATTGAGGGGC	T	4023.68	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=10.433;DP=777;FS=0.598;HRun=0;HaplotypeScore=238.9762;InbreedingCoeff=0.9967;MQ=89.44;MQ0=0;MQRankSum=-10.578;QD=59.17;ReadPosRankSum=0.776;VQSLOD=3.2213;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:58:99:0,163,8700	0/0:9,0:9:27.09:0,27,1378	0/0:36,0:36:93.24:0,93,4199	0/0:26,0:26:57.18:0,57,2907	0/0:28,0:28:81.25:0,81,4158	0/0:27,0:27:75.26:0,75,4175	0/0:27,0:27:78.24:0,78,3891	0/0:34,0:33:75.25:0,75,3758	0/0:33,0:33:96.31:0,96,5186	0/0:28,0:28:81.28:0,81,4302	0/0:16,0:16:48.15:0,48,2484	1/1:0,20:20:48.16:1654,48,0	0/0:30,0:30:84.27:0,84,4321	0/0:29,0:29:84.26:0,84,4015	0/0:28,0:28:84.27:0,84,4545	0/0:24,0:24:72.25:0,72,4041	0/0:21,0:21:54.19:0,54,3052	0/0:29,0:29:84.20:0,84,4329	0/0:22,0:22:60.20:0,60,2903	0/0:26,0:26:72.23:0,72,3861	0/0:49,0:49:99:0,148,7946	0/0:29,0:29:72.23:0,72,3819	1/1:3,25:28:53.74:1802,54,0	1/1:5,15:20:18.06:568,18,0	0/0:21,0:21:60.21:0,60,3264	0/0:33,0:33:93.30:0,93,4821	0/0:25,0:25:66.19:0,66,3339	0/0:21,0:21:63.22:0,63,3501
chr10	38973052	.	TG	T	7881.11	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-11.765;DP=610;FS=0.000;HRun=8;HaplotypeScore=89.4167;InbreedingCoeff=0.9789;MQ=80.68;MQ0=0;MQRankSum=-0.468;QD=23.04;ReadPosRankSum=3.181;VQSLOD=5.1218;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:12,27:39:72.10:694,72,0	1/1:2,11:13:30.05:290,30,0	0/0:23,0:22:4.83:0,5,466	0/0:14,0:14:26.25:0,26,263	1/1:3,28:31:81.06:768,81,0	1/1:2,30:32:84.13:811,84,0	1/1:1,21:22:63.10:608,63,0	0/0:11,0:24:40.84:0,41,260	1/1:3,13:16:36.06:347,36,0	1/1:8,23:31:69.10:665,69,0	1/1:4,14:18:39.06:376,39,0	0/0:3,0:17:46.27:0,46,270	1/1:4,10:14:27.03:261,27,0	1/1:1,15:16:45.07:434,45,0	1/1:2,10:12:30.05:290,30,0	1/1:1,18:19:48.08:464,48,0	1/1:4,29:33:78.12:753,78,0	1/1:1,14:15:42.07:406,42,0	0/0:4,0:15:31.68:0,32,181	0/0:6,0:29:51.61:0,52,261	0/0:3,0:18:31.75:0,32,172	1/1:6,25:31:75.07:714,75,0	0/0:9,0:26:57.66:0,58,324	0/0:9,1:30:31.80:0,32,289	0/0:16,0:16:45.13:0,45,531	0/0:5,1:17:14.31:0,14,205	0/0:4,0:23:54.35:0,54,278	0/0:3,0:16:28.72:0,29,146
chr10	38973060	.	GT	G	1214.47	PASS	AB=1.000;AC=25;AF=0.446;AN=56;BaseQRankSum=-2.850;DP=575;FS=6.858;HRun=1;HaplotypeScore=105.8495;InbreedingCoeff=0.5301;MQ=83.30;MQ0=0;MQRankSum=-0.263;QD=3.73;ReadPosRankSum=6.761;VQSLOD=0.2291;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:29:6.87:96,7,0	0/1:13,0:13:20.91:40,0,21	0/0:24,1:24:19.93:0,20,708	0/0:14,0:14:22.83:0,23,375	1/1:29,2:31:17.41:182,17,0	1/1:31,0:31:34.51:161,35,0	0/1:26,0:26:60.38:81,0,60	0/0:15,0:15:41.49:0,41,315	1/1:14,0:14:1.78:67,2,0	1/1:25,2:27:2.13:97,2,0	1/1:15,2:17:3.10:89,3,0	0/0:17,0:17:41.88:0,42,309	1/1:11,1:12:19.94:87,20,0	1/1:16,1:17:7.99:87,8,0	0/1:15,0:15:18.58:19,0,67	0/1:20,0:20:11.71:66,0,12	0/1:32,0:32:7.76:125,0,8	1/1:15,0:15:6.57:59,7,0	0/0:13,0:13:29.34:0,29,249	0/0:25,0:25:59.44:0,59,364	0/0:16,0:16:35.41:0,35,242	1/1:26,1:27:26.50:156,26,0	0/0:23,0:23:61.99:0,62,393	0/0:29,0:29:56.77:0,57,374	0/0:20,0:20:60.14:0,60,754	0/0:14,0:14:34.77:0,35,250	0/0:25,0:25:68.43:0,68,413	0/0:13,0:13:29.37:0,29,175
chr10	38973100	.	T	TG	1829.39	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-1.052;DP=577;FS=0.529;HRun=3;HaplotypeScore=87.8037;InbreedingCoeff=0.9985;MQ=87.43;MQ0=0;MQRankSum=-3.672;QD=28.58;ReadPosRankSum=0.515;VQSLOD=2.8529;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,99,1175	0/0:10,0:10:24.05:0,24,274	0/0:25,0:25:46.40:0,46,683	0/0:19,0:19:43.58:0,44,477	0/0:31,0:31:66.15:0,66,752	0/0:25,0:25:69.17:0,69,789	0/0:17,0:17:45.13:0,45,528	0/0:25,0:25:72.21:0,72,855	0/0:14,0:14:39.11:0,39,456	0/0:25,0:25:75.19:0,75,855	0/0:18,0:18:45.12:0,45,518	1/1:3,16:19:48.14:653,48,0	0/0:15,0:15:42.13:0,42,503	0/0:14,0:14:42.13:0,42,499	0/0:20,0:20:57.17:0,57,684	0/0:16,0:16:48.13:0,48,565	0/0:29,0:29:78.20:0,78,902	0/0:22,0:22:57.15:0,57,667	0/0:11,0:11:30.09:0,30,360	0/0:15,0:15:41.83:0,42,447	0/0:21,0:21:51.12:0,51,596	0/0:26,0:26:71.76:0,72,784	1/1:1,15:16:41.96:520,42,0	1/1:6,23:29:42.99:799,43,0	0/0:23,0:23:65.98:0,66,757	0/0:13,0:13:33.10:0,33,391	0/0:31,0:31:90.12:0,90,1011	0/0:12,0:11:27.03:0,27,295
chr10	38973206	.	CA	C	1994.55	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.234;DP=592;FS=0.000;HRun=1;HaplotypeScore=59.3333;InbreedingCoeff=0.9971;MQ=82.99;MQ0=1;MQRankSum=-2.691;QD=35.62;ReadPosRankSum=1.911;VQSLOD=3.6908;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:93.32:0,93,1478	0/0:7,0:7:18.06:0,18,288	0/0:19,0:19:57.15:0,57,842	0/0:16,0:16:47.99:0,48,708	0/0:26,0:26:78.27:0,78,1245	0/0:27,0:27:81.26:0,81,1271	0/0:18,0:18:54.18:0,54,860	0/0:25,0:25:75.24:0,75,1157	0/0:15,0:15:45.14:0,45,694	0/0:23,0:23:69.22:0,69,1063	0/0:15,0:15:45.15:0,45,719	1/1:0,22:22:60.19:839,60,0	0/0:19,0:19:51.16:0,51,781	0/0:21,0:21:63.21:0,63,1003	0/0:24,0:24:63.21:0,63,1002	0/0:20,0:20:60.19:0,60,931	0/0:21,0:21:63.14:0,63,930	0/0:20,0:20:60.20:0,60,959	0/0:20,0:20:60.20:0,60,958	0/0:18,0:18:51.17:0,51,815	0/0:33,0:33:99:0,99,1583	0/0:31,0:31:87.30:0,87,1388	1/1:0,16:16:48.16:670,48,0	1/1:0,18:18:45.15:629,45,0	0/0:20,0:20:60.20:0,60,957	0/0:21,0:21:60.20:0,60,960	0/0:32,0:31:93.30:0,93,1462	0/0:13,0:13:39.13:0,39,623
chr10	38973394	.	A	ATTT	13357.39	PASS	AB=1.000;AC=52;AF=0.929;AN=56;BaseQRankSum=-1.023;DP=553;FS=7.337;HRun=12;HaplotypeScore=98.1228;InbreedingCoeff=0.4325;MQ=56.12;MQ0=25;MQRankSum=-1.355;QD=25.11;ReadPosRankSum=-0.812;VQSLOD=3.5885;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:11,27:38:74.33:1214,74,0	1/1:3,6:11:24.02:361,24,0	0/1:23,0:17:39.36:39,0,107	0/1:14,0:8:11.11:11,0,28	1/1:9,4:17:32.95:404,33,0	1/1:3,6:10:18.53:319,19,0	1/1:4,8:11:27.07:448,27,0	1/1:17,13:34:69.09:971,69,0	1/1:4,10:16:27.01:396,27,0	1/1:7,13:25:45.06:638,45,0	1/1:7,13:19:36.03:529,36,0	1/1:7,0:8:17.36:172,17,0	1/1:9,11:20:36.57:577,37,0	1/1:11,11:22:48.57:770,49,0	1/1:7,10:21:33.05:474,33,0	1/1:5,8:13:29.46:443,29,0	1/1:10,13:28:55.30:805,55,0	1/1:7,4:12:19.78:284,20,0	1/1:10,9:20:36.08:545,36,0	1/1:9,7:19:24.04:326,24,0	1/1:5,6:10:18.01:276,18,0	1/1:9,9:17:36.06:508,36,0	1/1:10,0:15:26.99:357,27,0	1/1:8,0:16:29.89:377,30,0	0/0:20,0:19:26.68:0,27,287	1/1:7,10:17:43.32:665,43,0	1/1:12,24:39:85.16:1394,85,0	1/1:3,4:5:3.01:55,3,0
chr10	38974467	.	A	AG	24064.97	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-9.228;DP=688;FS=14.062;HRun=2;HaplotypeScore=62.4582;InbreedingCoeff=0.9983;MQ=94.94;MQ0=0;MQRankSum=-12.235;QD=38.63;ReadPosRankSum=8.058;VQSLOD=2.8926;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,37:40:99:1511,105,0	1/1:1,8:9:24.08:335,24,0	0/0:39,0:39:99:0,101,1249	0/0:26,0:26:72.20:0,72,873	1/1:0,31:31:84.28:1209,84,0	1/1:1,19:20:57.19:820,57,0	1/1:2,34:36:96.32:1382,96,0	1/1:4,32:36:93.30:1321,93,0	1/1:1,19:20:51.17:726,51,0	1/1:2,25:27:72.24:1024,72,0	1/1:2,20:22:51.17:734,51,0	1/1:1,15:16:39.13:561,39,0	1/1:0,26:26:69.23:993,69,0	1/1:0,27:27:78.26:1122,78,0	1/1:1,20:21:60.20:863,60,0	1/1:1,21:22:60.20:863,60,0	1/1:1,21:22:54.18:778,54,0	1/1:1,19:20:57.19:821,57,0	1/1:2,20:22:63.14:842,63,0	1/1:0,17:17:51.17:734,51,0	1/1:2,34:36:93.31:1339,93,0	1/1:1,22:23:63.21:907,63,0	1/1:0,24:24:69.23:992,69,0	1/1:3,32:35:81.27:1166,81,0	1/1:0,11:11:33.11:475,33,0	1/1:0,33:33:99:1424,99,0	1/1:0,18:18:51.17:734,51,0	1/1:0,9:9:27.09:389,27,0
chr10	38974650	.	A	ACCCTAGTACGTCT	51848.09	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-4.432;DP=600;FS=12.713;HRun=0;HaplotypeScore=214.1238;InbreedingCoeff=0.9995;MQ=74.99;MQ0=0;MQRankSum=-18.025;QD=129.62;ReadPosRankSum=1.989;VQSLOD=4.0421;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:20,8:31:42.14:2599,42,0	1/1:3,8:12:27.09:1773,27,0	0/0:14,0:14:36.12:0,36,1127	0/0:23,0:23:57.12:0,57,1865	1/1:4,14:22:33.11:2089,33,0	1/1:10,13:23:57.20:3583,57,0	1/1:18,4:24:48.16:2870,48,0	0/0:23,0:23:66.23:0,66,2490	1/1:9,5:16:36.12:2035,36,0	1/1:11,13:26:75.26:4358,75,0	1/1:6,8:16:30.06:1763,30,0	1/1:12,11:23:48.16:3029,48,0	1/1:12,15:28:72.25:4168,72,0	1/1:14,12:27:63.22:3901,63,0	1/1:10,18:30:75.26:4812,75,0	1/1:5,11:19:45.15:2882,45,0	1/1:17,8:27:51.18:2894,51,0	1/1:11,6:18:36.12:2044,36,0	0/0:20,0:20:57.19:0,57,1892	0/0:18,0:18:48.16:0,48,1811	0/0:27,0:27:78.25:0,78,2839	1/1:6,12:22:48.16:3107,48,0	1/1:5,7:15:30.10:1915,30,0	1/1:12,7:21:33.11:2025,33,0	0/0:15,0:14:45.15:0,45,1798	0/0:21,0:21:63.22:0,63,2419	0/0:26,0:26:66.19:0,66,2445	0/0:13,0:13:33.11:0,33,1254
chr10	38975047	.	T	TCC	12335.37	PASS	AB=0.542;AC=29;AF=0.518;AN=56;BaseQRankSum=-16.328;DP=611;FS=1.444;HRun=4;HaplotypeScore=71.7424;InbreedingCoeff=0.9231;MQ=84.89;MQ0=1;MQRankSum=-1.834;QD=39.41;ReadPosRankSum=6.221;VQSLOD=3.9728;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,38:42:90.31:1620,90,0	1/1:0,12:12:30.10:540,30,0	0/0:21,0:21:61.44:0,61,785	0/0:20,0:20:51.08:0,51,607	1/1:0,11:11:27.01:418,27,0	1/1:0,12:12:30.10:539,30,0	1/1:3,22:25:48.16:864,48,0	0/0:33,0:32:81.21:0,81,1023	1/1:0,21:22:45.15:810,45,0	1/1:4,14:19:48.12:768,48,0	1/1:2,6:8:9.03:162,9,0	0/0:18,0:18:48.15:0,48,625	0/1:2,11:13:12.92:405,0,13	1/1:1,23:24:57.20:1027,57,0	1/1:1,24:26:60.21:1080,60,0	1/1:0,17:17:51.17:918,51,0	1/1:3,38:41:93.32:1675,93,0	1/1:1,21:21:48.16:864,48,0	0/0:16,0:16:33.10:0,33,439	0/0:17,0:17:42.11:0,42,526	0/0:37,0:37:99:0,102,1313	1/1:1,18:19:36.12:645,36,0	0/0:13,0:13:39.09:0,39,498	0/0:29,0:29:75.23:0,75,985	0/0:19,0:19:54.17:0,54,717	0/0:27,1:28:21.18:0,21,881	0/0:32,0:32:87.28:0,87,1159	0/0:15,0:15:45.15:0,45,599
chr10	38977138	.	G	GCACACACACACA	15516.04	PASS	AB=0.559;AC=44;AF=0.786;AN=56;BaseQRankSum=-10.898;DP=709;FS=7.544;HRun=0;HaplotypeScore=246.5131;InbreedingCoeff=0.2839;MQ=55.38;MQ0=4;MQRankSum=-8.795;QD=26.03;ReadPosRankSum=-3.233;VQSLOD=2.3872;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:11,0:41:42.06:42,0,88	1/1:2,0:14:15.05:586,15,0	0/0:46,0:26:17.72:0,18,445	0/0:36,0:27:21.14:0,21,561	1/1:11,0:23:5.58:182,6,0	0/1:1,0:10:29.09:29,0,45	0/1:6,0:26:33.95:34,0,186	1/1:35,0:35:75.18:1871,75,0	1/1:11,0:27:36.12:1191,36,0	1/1:9,0:29:7.97:293,8,0	0/1:5,0:19:17.50:23,0,17	1/1:13,11:26:24.04:1114,24,0	0/1:5,0:22:34.33:34,0,59	0/1:3,0:19:16.89:17,0,59	1/1:12,0:35:27.47:966,27,0	1/1:9,0:24:45.15:1532,45,0	1/1:10,1:22:21.07:742,21,0	0/0:8,0:30:25.95:0,26,127	1/1:13,4:17:21.07:582,21,0	1/1:10,5:15:3.48:178,3,0	1/1:21,15:38:9.34:311,9,0	1/1:8,0:26:16.17:643,16,0	1/1:4,12:18:15.52:692,16,0	1/1:16,12:30:6.95:320,7,0	1/1:10,0:22:18.06:221,18,0	1/1:9,13:26:60.65:2500,61,0	1/1:7,14:23:25.33:1057,25,0	1/1:0,5:7:6.02:355,6,0
chr10	38977479	.	AAGAGAGAGAG	A	495.69	PASS	AC=4;AF=0.077;AN=52;BaseQRankSum=3.273;DP=482;FS=6.812;HRun=0;HaplotypeScore=157.1001;InbreedingCoeff=0.4681;MQ=66.06;MQ0=11;MQRankSum=-3.987;QD=8.85;ReadPosRankSum=-1.156;VQSLOD=2.1220;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:29:9.50:0,10,298	0/0:7,0:7:3.01:0,3,122	./.	0/0:19,0:12:0:0,0,0	0/0:8,0:7:8.99:0,9,290	0/0:14,0:12:12.04:0,12,306	0/0:24,0:27:27.03:0,27,668	0/0:29,0:27:11.01:0,11,153	0/0:22,0:21:5.99:0,6,169	0/0:24,0:22:35.48:0,35,1058	0/0:7,0:7:6:0,6,261	1/1:16,4:21:12.04:314,12,0	0/0:9,0:10:12.04:0,12,395	0/0:12,0:12:6.02:0,6,166	0/0:13,0:12:9.03:0,9,422	0/0:15,0:16:8.30:0,8,327	0/0:13,0:13:11.28:0,11,229	0/0:15,0:15:18.04:0,18,649	0/0:20,0:19:10.39:0,10,299	0/0:18,0:17:3.01:0,3,123	0/0:23,0:21:9.03:0,9,281	0/0:18,0:18:9.03:0,9,323	./.	1/1:25,10:35:12.51:290,13,0	0/0:17,0:17:5.69:0,6,189	0/0:9,0:8:6.49:0,6,203	0/0:9,0:9:6.02:0,6,194	0/0:7,0:6:4.83:0,5,152
chr10	38977886	.	CT	C	17726.90	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=5.079;DP=572;FS=6.293;HRun=1;HaplotypeScore=179.8535;InbreedingCoeff=0.9769;MQ=73.41;MQ0=0;MQRankSum=-8.869;QD=32.77;ReadPosRankSum=5.102;VQSLOD=4.1176;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,41:42:99:1284,99,0	1/1:0,10:10:24.08:314,24,0	0/0:10,0:10:26.57:0,27,380	0/0:21,0:21:39.58:0,40,748	1/1:1,18:19:39.08:495,39,0	1/1:2,14:16:45.10:551,45,0	1/1:4,19:23:66.50:751,67,0	1/1:0,21:22:58.75:772,59,0	1/1:3,19:22:66.11:810,66,0	1/1:3,18:20:56.88:668,57,0	1/1:0,13:13:24.07:288,24,0	1/1:0,16:16:42.13:544,42,0	1/1:0,12:12:36.12:466,36,0	1/1:0,23:23:69.22:911,69,0	1/1:0,19:19:51.17:693,51,0	1/1:1,8:9:27.09:371,27,0	1/1:3,38:41:99:1380,105,0	1/1:1,30:31:90.30:1211,90,0	1/1:2,13:15:42.08:511,42,0	1/1:0,8:8:17.92:211,18,0	1/1:0,32:31:60.66:777,61,0	1/1:1,20:21:51.13:631,51,0	1/1:1,23:24:45.14:571,45,0	1/1:0,22:22:60.18:767,60,0	1/1:0,23:23:63.02:766,63,0	1/1:4,19:23:67.45:841,67,0	1/1:4,22:26:78.22:984,78,0	1/1:0,8:7:12.04:158,12,0
chr10	38977890	.	CCA	C	13098.22	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=6.807;DP=566;FS=3.356;HRun=0;HaplotypeScore=205.4108;InbreedingCoeff=0.9781;MQ=77.12;MQ0=0;MQRankSum=-8.598;QD=24.71;ReadPosRankSum=6.315;VQSLOD=5.1127;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:38,1:39:99:1027,99,0	1/1:10,0:10:24.03:248,24,0	0/0:12,0:12:33.10:0,33,576	0/0:24,0:24:26.50:0,26,1028	1/1:19,0:19:38.98:384,39,0	1/1:15,1:16:45:451,45,0	1/1:20,0:20:47.35:423,47,0	1/1:21,0:21:48.06:544,48,0	1/1:21,0:21:50.83:593,51,0	1/1:20,0:19:47.73:506,48,0	1/1:12,0:12:23.93:208,24,0	1/1:16,0:16:39.03:386,39,0	1/1:12,0:12:36.06:367,36,0	1/1:23,1:23:66.09:693,66,0	1/1:20,0:20:52.93:569,53,0	1/1:8,0:8:24.07:271,24,0	1/1:39,0:39:96.04:993,96,0	1/1:30,2:32:87.17:939,87,0	1/1:15,0:15:35.89:360,36,0	1/1:9,0:9:20.89:211,21,0	1/1:33,0:32:56.69:599,57,0	1/1:20,2:22:50.65:484,51,0	1/1:23,1:24:42.02:435,42,0	1/1:22,0:22:53.59:534,54,0	1/1:24,0:24:50.51:519,51,0	1/1:21,0:21:53.06:544,53,0	1/1:23,0:22:65.09:667,65,0	1/1:8,0:7:12.03:143,12,0
chr10	38977891	.	C	CGG	22587.04	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=4.132;DP=517;FS=5.959;HRun=0;HaplotypeScore=163.2656;InbreedingCoeff=0.9701;MQ=80.89;MQ0=0;MQRankSum=-9.004;QD=47.06;ReadPosRankSum=5.901;VQSLOD=5.1245;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,35:37:99:1786,99,0	1/1:1,8:9:24.08:432,24,0	0/0:12,0:12:30.04:0,30,423	0/0:25,0:25:14.86:0,15,805	1/1:0,16:16:39.13:709,39,0	1/1:2,14:16:47.98:786,48,0	1/1:0,16:16:48.16:822,48,0	1/1:2,15:18:47.92:834,48,0	1/1:2,19:21:60.16:1024,60,0	1/1:1,17:17:47.95:789,48,0	1/1:0,10:11:24.08:406,24,0	1/1:1,13:14:39.13:690,39,0	1/1:0,12:12:36.12:654,36,0	1/1:1,22:22:66.23:1220,66,0	1/1:3,16:19:54.14:938,54,0	1/1:0,8:8:24.08:457,24,0	1/1:0,36:37:96.31:1731,96,0	1/1:2,29:31:87.28:1587,87,0	1/1:0,12:12:36.12:632,36,0	1/1:1,7:8:21.04:324,21,0	1/1:6,21:26:57.05:930,57,0	1/1:2,20:22:51.17:909,51,0	1/1:1,16:17:42.13:711,42,0	1/1:2,20:22:56.80:987,57,0	1/1:1,17:18:51.17:920,51,0	1/1:1,18:19:57.13:966,57,0	1/1:2,22:23:66.14:1150,66,0	1/1:1,4:5:12:191,12,0
chr10	38978090	.	AG	A	6056.23	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=10.657;DP=557;FS=8.321;HRun=3;HaplotypeScore=59.5703;InbreedingCoeff=0.9899;MQ=87.25;MQ0=0;MQRankSum=-1.575;QD=37.62;ReadPosRankSum=1.165;VQSLOD=5.1667;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,32:32:81.27:1132,81,0	0/0:3,0:3:9.03:0,9,142	0/0:23,0:22:46.28:0,46,825	0/0:24,0:24:43.32:0,43,915	0/0:25,0:25:75.26:0,75,1196	1/1:0,24:24:60.20:839,60,0	1/1:0,25:25:69.23:965,69,0	0/0:27,0:27:81.28:0,81,1294	0/0:26,0:26:78.25:0,78,1222	1/1:0,14:14:39.13:545,39,0	1/1:0,16:16:45.07:607,45,0	0/0:22,0:22:66.23:0,66,1055	1/1:0,19:19:57.19:793,57,0	1/1:0,18:18:48.16:671,48,0	0/0:19,0:19:57.16:0,57,863	0/0:14,0:14:42.14:0,42,669	0/0:31,0:31:93.30:0,93,1455	1/1:0,13:13:36.12:503,36,0	0/0:17,0:17:51.17:0,51,799	0/0:22,0:22:66.22:0,66,1044	0/0:22,0:22:63.21:0,63,1007	0/0:18,0:18:54.18:0,54,855	0/0:27,0:27:78.25:0,78,1219	0/0:18,0:18:54.14:0,54,832	0/0:11,0:11:33.11:0,33,528	0/0:21,0:21:63.17:0,63,979	0/0:18,0:18:54.18:0,54,857	0/0:8,0:8:24.08:0,24,384
chr10	38979106	.	A	ATT	12098.99	PASS	AC=50;AF=0.926;AN=54;BaseQRankSum=-5.790;DP=583;FS=0.000;HRun=9;HaplotypeScore=85.6285;InbreedingCoeff=0.9716;MQ=77.04;MQ0=2;MQRankSum=-5.407;QD=22.66;ReadPosRankSum=3.922;VQSLOD=4.0214;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,0:42:67.25:231,67,0	1/1:2,6:8:21.02:296,21,0	0/0:17,0:14:32.80:0,33,310	0/0:28,0:27:10.61:0,11,222	1/1:4,19:23:54.14:777,54,0	1/1:8,0:26:39.93:137,40,0	1/1:1,1:17:40.44:175,40,0	1/1:6,19:26:60.18:880,60,0	1/1:4,11:18:35.59:495,36,0	1/1:9,0:27:47.39:166,47,0	1/1:0,2:17:38.46:204,38,0	1/1:3,16:19:35.86:554,36,0	1/1:3,1:17:30.46:140,30,0	1/1:1,0:19:39.93:137,40,0	1/1:2,19:22:50.92:778,51,0	1/1:2,11:13:30.10:462,30,0	1/1:5,30:36:83.26:1210,83,0	1/1:4,0:28:49.91:171,50,0	1/1:6,8:15:36.11:513,36,0	1/1:9,15:25:62.67:900,63,0	1/1:1,12:13:27.09:416,27,0	1/1:6,14:21:42.09:600,42,0	1/1:4,10:17:36.11:519,36,0	1/1:0,16:19:44.73:622,45,0	1/1:1,0:13:19.96:68,20,0	1/1:4,25:30:75.19:1057,75,0	1/1:4,15:21:41.62:591,42,0	./.
chr10	38979965	.	AG	A	4234.44	PASS	AB=0.857;AC=52;AF=0.929;AN=56;BaseQRankSum=-2.582;DP=487;FS=2.445;HRun=4;HaplotypeScore=63.2584;InbreedingCoeff=0.4651;MQ=52.68;MQ0=110;MQRankSum=-1.686;QD=9.35;ReadPosRankSum=2.168;VQSLOD=1.8153;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,10:15:14.96:147,15,0	1/1:5,1:4:4.27:34,4,0	0/0:34,0:11:22.55:0,23,201	0/1:25,0:10:18.19:18,0,86	1/1:8,8:8:14.97:145,15,0	1/1:6,9:11:15.94:214,16,0	1/1:8,10:13:24.01:257,24,0	1/1:8,23:22:51.62:605,52,0	1/1:26,1:20:9.05:63,9,0	1/1:3,9:5:15:162,15,0	1/1:6,12:8:12.92:144,13,0	1/1:10,1:8:8.94:75,9,0	1/1:5,3:4:8.94:68,9,0	1/1:8,6:9:23.96:229,24,0	1/1:13,0:11:19.16:99,19,0	1/1:18,2:16:11.56:84,12,0	1/1:16,2:16:11.35:87,11,0	1/1:9,5:10:9.83:254,10,0	1/1:9,0:8:21.01:228,21,0	1/1:11,8:9:17.99:184,18,0	1/1:16,0:15:0.47:1,0,0	1/1:8,10:7:18.02:190,18,0	0/1:9,6:8:0:0,0,0	1/1:7,6:5:8.05:69,8,0	1/1:8,3:7:8.23:78,8,0	1/1:20,2:15:35.90:330,36,0	1/1:10,13:12:32.91:298,33,0	1/1:4,14:9:17.97:172,18,0
chr10	38979967	.	GGGA	G	4363.62	PASS	AB=0.993;AC=38;AF=0.679;AN=56;BaseQRankSum=-6.003;DP=499;FS=12.901;HRun=0;HaplotypeScore=71.5934;InbreedingCoeff=0.1468;MQ=52.03;MQ0=114;MQRankSum=-2.541;QD=10.51;ReadPosRankSum=-0.191;VQSLOD=3.1391;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:14:15.04:184,15,0	0/0:7,0:5:6.44:0,6,46	0/0:34,0:11:17.56:0,18,187	0/1:23,0:10:13.78:14,0,98	0/1:16,0:7:14.74:57,0,15	0/1:14,0:10:20.36:189,0,20	1/1:16,0:12:23.19:270,23,0	1/1:33,0:24:50.89:601,51,0	0/0:28,0:21:10.13:0,10,85	1/1:14,0:5:15.05:176,15,0	1/1:18,0:8:12.51:143,13,0	0/1:11,0:8:36.97:37,0,45	1/1:5,1:4:9.03:124,9,0	1/1:12,0:8:24.03:257,24,0	0/1:12,1:11:27.48:27,0,117	0/1:21,0:17:6.96:7,0,15	0/1:20,0:17:10.34:10,0,34	1/1:13,0:10:15.19:272,15,0	1/1:3,9:11:21.50:281,21,0	1/1:15,1:7:18.06:229,18,0	1/1:1,15:15:2.94:18,3,0	0/1:20,0:8:0.21:150,0,0	0/0:15,0:8:2.86:0,3,20	0/1:13,0:5:21.15:27,0,21	0/1:14,0:10:9.51:62,0,10	1/1:6,16:15:36.08:488,36,0	1/1:18,4:12:33.11:493,33,0	1/1:17,0:9:18.06:246,18,0
chr10	38979968	.	G	GA	4619.20	PASS	AB=0.832;AC=51;AF=0.911;AN=56;BaseQRankSum=-3.012;DP=519;FS=0.971;HRun=0;HaplotypeScore=86.1213;InbreedingCoeff=0.2963;MQ=50.65;MQ0=117;MQRankSum=-1.186;QD=9.52;ReadPosRankSum=2.821;VQSLOD=4.8332;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:14,7:14:13.43:121,13,0	1/1:7,2:7:4.78:53,5,0	0/0:34,0:11:22.55:0,23,201	0/1:25,0:10:18.36:18,0,86	1/1:14,5:10:15.05:204,15,0	1/1:12,0:10:18.84:267,19,0	1/1:14,1:10:26.09:278,26,0	1/1:29,4:24:56.25:630,56,0	0/1:6,8:23:1.68:113,0,2	1/1:13,2:5:14.07:149,14,0	0/1:15,1:6:12.61:127,0,13	1/1:3,9:9:7.54:118,8,0	1/1:7,2:5:6.48:20,6,0	1/1:13,1:8:22.45:201,22,0	1/1:4,10:12:23.16:305,23,0	1/1:6,6:17:13.30:146,13,0	1/1:10,14:21:19.16:170,19,0	1/1:9,5:10:8.90:240,9,0	1/1:12,1:12:23.28:233,23,0	1/1:15,3:8:16.16:155,16,0	1/1:15,1:15:0.25:0,0,0	1/1:17,5:10:17.84:215,18,0	1/1:7,9:9:2.94:18,3,0	1/1:9,3:5:9.03:123,9,0	1/1:11,5:12:12.03:136,12,0	1/1:18,4:15:32.13:260,32,0	1/1:18,5:12:28.31:195,28,0	1/1:19,0:9:15.69:127,16,0
chr10	38980028	.	TTA	T	10285.37	PASS	AB=0.883;AC=48;AF=0.857;AN=56;BaseQRankSum=-5.265;DP=529;FS=16.331;HRun=0;HaplotypeScore=108.6276;InbreedingCoeff=0.4624;MQ=65.72;MQ0=15;MQRankSum=0.879;QD=21.61;ReadPosRankSum=6.905;VQSLOD=4.1640;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:28:20.23:141,20,0	1/1:1,9:10:17.80:196,18,0	0/0:28,0:14:32.05:0,32,419	0/0:25,0:14:23.69:0,24,431	1/1:1,20:21:32.27:459,32,0	1/1:23,1:23:6.77:146,7,0	1/1:20,1:21:38.65:222,39,0	1/1:3,31:33:99:1240,99,0	1/1:11,6:17:32.73:578,33,0	1/1:21,0:21:17.73:98,18,0	1/1:15,0:14:18.51:68,19,0	1/1:12,4:15:44.61:487,45,0	0/1:16,0:14:27.01:99,0,27	0/1:13,0:13:5.15:26,0,5	1/1:9,6:14:36.04:435,36,0	1/1:8,8:17:45.05:544,45,0	1/1:11,9:19:54.08:683,54,0	0/1:16,0:14:4.20:23,0,4	1/1:7,9:16:45.02:531,45,0	1/1:1,17:18:50.76:567,51,0	1/1:8,3:11:33.02:415,33,0	1/1:2,15:16:41.53:407,42,0	1/1:10,5:15:44.80:529,45,0	0/1:2,15:16:5.04:112,0,5	1/1:0,21:21:30.10:410,30,0	1/1:8,6:14:39.09:501,39,0	1/1:17,11:27:81.08:1037,81,0	1/1:2,13:13:24.08:333,24,0
chr10	38980029	.	TA	T	8239.89	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-2.830;DP=513;FS=5.364;HRun=3;HaplotypeScore=105.8556;InbreedingCoeff=0.9599;MQ=68.56;MQ0=8;MQRankSum=-4.640;QD=17.99;ReadPosRankSum=3.768;VQSLOD=4.5956;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,22:24:59.49:565,59,0	1/1:9,0:9:17.41:98,17,0	0/0:27,1:14:23.85:0,24,297	0/0:27,0:16:38.26:0,38,327	1/1:20,1:21:46.61:271,47,0	1/1:4,17:21:59.69:583,60,0	1/1:6,14:20:59.89:639,60,0	1/1:33,0:33:93.81:576,94,0	1/1:17,0:17:46.90:279,47,0	1/1:1,20:21:56.84:598,57,0	1/1:2,12:13:29.79:327,30,0	1/1:17,0:16:43.66:269,44,0	1/1:8,5:12:26.87:254,27,0	1/1:1,12:13:27.08:333,27,0	1/1:13,0:14:33.92:215,34,0	1/1:17,0:17:45.26:273,45,0	1/1:19,0:18:52.64:317,53,0	1/1:0,14:13:27.08:329,27,0	1/1:16,0:16:41.05:266,41,0	1/1:18,0:18:49.75:296,50,0	1/1:11,0:11:32.25:197,32,0	1/1:16,0:16:40.82:235,41,0	1/1:15,0:15:43.71:259,44,0	1/1:16,0:15:8.75:51,9,0	1/1:21,0:21:29.10:165,29,0	1/1:16,0:16:41.05:258,41,0	1/1:28,0:27:69.11:451,69,0	1/1:14,0:13:23.40:137,23,0
chr10	38980282	.	G	GCAAAATTACATACTCCTTA	76825.50	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-4.545;DP=651;FS=2.268;HRun=0;HaplotypeScore=221.3608;InbreedingCoeff=0.8974;MQ=71.39;MQ0=0;MQRankSum=-9.652;QD=125.12;ReadPosRankSum=3.965;VQSLOD=4.8566;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,7:39:54.17:3832,54,0	1/1:1,6:10:18.06:1572,18,0	0/0:17,0:17:51.17:0,51,2264	0/0:20,0:20:51.17:0,51,2133	1/1:9,5:19:36.55:1704,37,0	1/1:9,12:28:63.22:5002,63,0	1/1:8,3:22:27.56:1475,28,0	1/1:39,0:38:99:6354,105,0	1/1:4,8:26:36.12:2852,36,0	1/1:9,7:28:66.68:4359,67,0	1/1:9,6:20:30.10:1973,30,0	1/1:14,8:34:60.21:4619,60,0	1/1:12,5:20:36.12:3071,36,0	1/1:7,8:26:39.13:2669,39,0	1/1:11,8:31:48.16:3717,48,0	1/1:10,9:30:51.18:4199,51,0	1/1:15,2:26:42.14:2673,42,0	1/1:9,4:16:32.14:2225,32,0	1/1:10,3:24:69.20:4286,69,0	1/1:8,6:18:33.07:2154,33,0	1/1:11,5:24:30.10:2352,30,0	1/1:11,8:24:45.15:3253,45,0	1/1:8,3:19:24.55:1739,25,0	1/1:12,3:24:33.11:2111,33,0	1/1:3,1:8:12.04:714,12,0	1/1:6,5:19:54.11:2965,54,0	1/1:3,15:31:57.19:4682,57,0	1/1:0,1:5:3.01:274,3,0
chr10	38980492	.	G	GAT	14291.44	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-16.551;DP=599;FS=15.849;HRun=0;HaplotypeScore=79.3680;InbreedingCoeff=0.9942;MQ=84.69;MQ0=3;MQRankSum=-2.556;QD=39.15;ReadPosRankSum=1.974;VQSLOD=5.8270;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:66.19:0,66,834	1/1:0,8:8:18.06:303,18,0	0/0:20,0:20:54.18:0,54,693	0/0:20,0:20:32.96:0,33,532	1/1:3,24:26:60.21:1012,60,0	0/0:23,0:23:63.20:0,63,799	0/0:23,0:23:54.16:0,54,681	1/1:7,26:33:78.27:1316,78,0	1/1:0,20:20:60.20:999,60,0	0/0:27,0:27:72.23:0,72,916	0/0:22,0:22:48.16:0,48,617	1/1:6,12:19:36.12:607,36,0	0/0:14,0:14:30.10:0,30,385	0/0:24,0:24:63.19:0,63,796	1/1:1,20:21:48.16:809,48,0	1/1:4,17:21:45.15:746,45,0	1/1:3,23:27:60.21:1012,60,0	0/0:16,0:16:45.15:0,45,579	1/1:2,11:13:35.96:543,36,0	1/1:1,27:28:75.26:1265,75,0	1/1:3,16:19:35.33:747,35,0	1/1:7,24:31:63.22:1062,63,0	1/1:1,17:18:42.14:707,42,0	1/1:3,13:16:30.10:506,30,0	0/0:18,0:18:45.14:0,45,566	1/1:1,28:28:81.28:1366,81,0	1/1:4,24:28:66.21:1088,66,0	1/1:0,6:6:12.04:202,12,0
chr10	38980896	.	A	AAC	2595.43	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=2.132;DP=556;FS=4.440;HRun=0;HaplotypeScore=137.2313;InbreedingCoeff=0.5518;MQ=53.13;MQ0=10;MQRankSum=-1.831;QD=5.41;ReadPosRankSum=-1.630;VQSLOD=2.6850;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:26:20.92:181,21,0	1/1:7,0:7:9.24:59,9,0	0/0:34,0:21:5.91:0,6,38	0/0:29,0:20:2.96:0,3,19	1/1:19,0:13:8.75:50,9,0	1/1:25,0:25:46.98:324,47,0	1/1:10,0:14:5.91:40,6,0	1/1:34,0:30:12.32:86,12,0	1/1:20,9:29:10.18:121,10,0	1/1:24,0:24:32.90:227,33,0	1/1:21,0:21:17.88:141,18,0	1/1:23,0:25:33.84:330,34,0	1/1:18,0:18:32.56:230,33,0	1/1:12,0:10:11.88:101,12,0	1/1:22,0:21:14.61:88,15,0	1/1:29,0:26:12.18:73,12,0	1/1:14,0:14:7.71:42,8,0	1/1:9,0:9:8.93:63,9,0	1/1:17,0:15:14.32:89,14,0	1/1:20,0:17:5.92:41,6,0	1/1:14,0:14:2.97:20,3,0	1/1:14,0:13:2.92:17,3,0	1/1:15,0:15:5.86:43,6,0	1/1:12,3:21:20.54:230,21,0	0/0:13,0:13:25.42:0,25,164	1/1:30,0:24:16.29:105,16,0	1/1:12,0:12:0.47:1,0,0	1/1:7,0:3:2.98:22,3,0
chr10	38980928	.	CAGAGAGAG	C	1853.42	PASS	AB=0.937;AC=31;AF=0.554;AN=56;BaseQRankSum=-0.377;DP=476;FS=2.093;HRun=0;HaplotypeScore=179.6869;InbreedingCoeff=-0.2797;MQ=36.05;MQ0=7;MQRankSum=0.456;QD=4.31;ReadPosRankSum=-0.844;VQSLOD=2.8085;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:21:89.04:89,0,169	1/1:9,1:9:1.15:3,1,0	0/0:4,0:2:5.85:0,6,34	0/0:3,0:2:3.01:0,3,36	0/1:18,2:14:0.03:0,0,0	0/1:28,0:28:99:188,0,492	0/1:16,0:16:8.46:8,0,32	0/1:10,0:14:30.49:160,0,30	0/0:21,0:21:0.58:0,1,41	0/1:22,0:21:60.06:60,0,354	0/1:21,0:21:85.59:86,0,142	0/1:22,0:23:99:140,0,112	0/1:18,0:18:46.02:46,0,400	0/1:13,0:11:66.09:68,0,66	0/1:12,4:15:0:0,0,0	1/1:19,6:22:14.47:259,14,0	1/1:11,2:13:1.35:142,1,0	1/1:7,0:7:5.93:40,6,0	0/1:11,0:16:68.26:137,0,68	0/1:20,0:17:8.62:35,0,9	1/1:11,0:11:1.34:3,1,0	1/1:12,10:20:2.08:6,2,0	0/1:12,0:12:7.51:75,0,8	0/1:24,0:25:45.21:45,0,51	0/0:18,0:17:7.51:0,8,128	0/1:26,0:20:2.73:326,0,3	0/1:11,0:12:6.86:56,0,7	1/1:10,0:5:3.86:22,4,0
chr10	38980938	.	GAA	G	1664.39	PASS	AB=0.988;AC=28;AF=0.538;AN=52;BaseQRankSum=-1.934;DP=414;FS=3.532;HRun=3;HaplotypeScore=159.4305;InbreedingCoeff=-0.0527;MQ=37.17;MQ0=8;MQRankSum=3.530;QD=5.27;ReadPosRankSum=6.268;VQSLOD=0.1650;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:20,1:20:7.88:180,8,0	0/0:10,0:9:2.25:0,2,5	./.	./.	0/0:19,0:13:6.85:0,7,19	0/1:30,0:29:39.99:266,0,40	1/1:16,0:15:7.95:77,8,0	0/1:20,0:17:22.61:164,0,23	0/0:18,0:18:0.82:0,1,50	1/1:18,0:17:3.35:111,3,0	1/1:20,0:21:14.29:140,14,0	0/1:21,0:20:21.94:22,0,117	0/1:18,0:18:11.39:106,0,11	1/1:12,0:11:13.06:93,13,0	0/0:19,0:18:6.88:0,7,19	1/1:18,0:15:9.83:48,10,0	0/1:8,0:8:5.76:19,0,6	1/1:7,0:7:8.31:52,8,0	0/1:15,1:15:57.27:125,0,57	0/1:9,1:7:10.52:11,0,21	0/1:8,0:8:22.01:29,0,22	0/0:21,0:19:8.05:0,8,21	0/0:11,0:11:3.95:0,4,83	0/1:19,0:19:14.57:39,0,15	0/1:17,0:16:12.56:156,0,13	1/1:15,2:14:5.50:172,5,0	0/1:9,0:9:8.18:8,0,24	0/1:10,0:5:0.55:1,0,21
chr10	38980978	.	GAGAA	G	4443.70	PASS	AB=0.993;AC=37;AF=0.661;AN=56;BaseQRankSum=-1.359;DP=498;FS=21.496;HRun=0;HaplotypeScore=139.8483;InbreedingCoeff=-0.2107;MQ=61.60;MQ0=9;MQRankSum=0.065;QD=10.05;ReadPosRankSum=-0.331;VQSLOD=2.3518;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:16,0:16:42.46:147,0,42	1/1:6,0:6:7.91:39,8,0	0/0:29,0:22:53.03:0,53,607	0/0:27,0:14:35.96:0,36,348	1/1:24,0:22:3.66:102,4,0	0/1:26,0:26:99:207,0,115	1/1:19,0:16:35.20:251,35,0	0/1:28,0:27:12.08:502,0,12	0/1:11,0:11:11.84:12,0,32	0/1:16,0:16:34.91:174,0,35	0/1:28,0:27:7.24:223,0,7	0/1:23,0:22:97.71:225,0,98	0/1:17,0:17:42.74:146,0,43	0/1:11,0:10:8.83:100,0,9	1/1:20,0:19:10.82:25,11,0	1/1:19,0:17:14.29:96,14,0	0/1:8,0:8:3.36:42,0,3	1/1:7,0:7:11.89:84,12,0	0/1:8,1:9:42.05:122,0,42	1/1:16,1:15:1.24:216,1,0	1/1:13,0:13:2.05:179,2,0	1/1:24,0:24:22.72:108,23,0	0/1:16,0:16:25.88:218,0,26	0/1:14,0:14:26.71:113,0,27	0/1:14,0:14:25.19:166,0,25	1/1:17,2:19:36.12:492,36,0	0/1:11,0:11:3.30:102,0,3	1/1:26,0:22:26.89:354,27,0
chr10	38980980	.	GAA	G	6431.94	PASS	AB=1.000;AC=48;AF=0.857;AN=56;BaseQRankSum=-0.688;DP=507;FS=18.924;HRun=4;HaplotypeScore=121.2484;InbreedingCoeff=0.3913;MQ=62.79;MQ0=9;MQRankSum=-1.979;QD=14.29;ReadPosRankSum=-0.269;VQSLOD=1.0120;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:17:11.72:201,12,0	1/1:0,6:6:14.88:143,15,0	0/0:30,0:23:55.73:0,56,636	0/0:27,0:14:35.92:0,36,346	1/1:2,22:23:29.69:259,30,0	1/1:26,0:26:11.26:245,11,0	1/1:18,0:15:38.72:271,39,0	1/1:30,0:29:77.80:657,78,0	1/1:2,8:10:9.03:124,9,0	1/1:18,0:18:25.33:247,25,0	1/1:27,0:26:37.33:288,37,0	0/1:25,0:24:26.45:208,0,26	1/1:17,0:17:18.13:173,18,0	1/1:11,0:10:13.36:115,13,0	1/1:2,18:19:33.10:397,33,0	1/1:3,16:17:24.08:320,24,0	1/1:1,8:9:9.03:123,9,0	1/1:8,0:8:14.85:104,15,0	0/1:11,0:11:10.72:153,0,11	1/1:16,0:15:13.73:254,14,0	1/1:13,0:13:20.21:190,20,0	1/1:1,23:24:47.70:470,48,0	1/1:17,1:18:26.78:279,27,0	1/1:16,0:16:3.95:115,4,0	0/1:14,0:14:3.84:191,0,4	1/1:19,0:19:44.84:419,45,0	0/1:10,0:10:7.61:77,0,8	1/1:24,0:21:49.90:409,50,0
chr10	38981258	.	TCACA	T	704.99	PASS	AB=1.000;AC=31;AF=0.816;AN=38;BaseQRankSum=3.173;DP=437;FS=1.560;HRun=0;HaplotypeScore=90.3681;InbreedingCoeff=0.3987;MQ=61.81;MQ0=7;MQRankSum=-2.446;QD=2.90;ReadPosRankSum=1.152;VQSLOD=1.7186;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:4,0:4:3.01:0,3,42	./.	./.	1/1:6,3:10:0.47:1,0,0	0/0:12,0:12:9.03:0,9,133	0/0:20,0:19:14.77:0,15,222	./.	1/1:9,5:15:5.51:54,6,0	1/1:10,0:12:6.01:56,6,0	./.	1/1:7,0:9:3:28,3,0	1/1:8,1:9:3.01:46,3,0	./.	1/1:12,0:12:3.01:46,3,0	1/1:11,1:12:6.02:92,6,0	1/1:11,8:20:15.04:210,15,0	1/1:12,0:14:2.96:28,3,0	./.	1/1:9,0:13:3:28,3,0	0/1:34,0:33:0:0,0,0	1/1:6,4:10:3.01:46,3,0	./.	1/1:28,0:32:6.01:56,6,0	1/1:8,0:13:6.01:56,6,0	1/1:14,0:17:2.96:19,3,0	1/1:7,0:11:6.01:56,6,0	./.
chr10	38981996	.	TAAAC	T	9309.39	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=0.096;DP=519;FS=5.935;HRun=0;HaplotypeScore=113.9254;InbreedingCoeff=0.9817;MQ=56.38;MQ0=0;MQRankSum=-3.124;QD=27.96;ReadPosRankSum=1.831;VQSLOD=4.5915;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:54.19:0,54,1023	1/1:3,3:6:9.03:138,9,0	0/0:18,0:15:21.07:0,21,424	0/0:7,0:5:15.05:0,15,322	1/1:10,19:29:57.19:865,57,0	0/0:18,0:18:36.12:0,36,657	0/0:20,0:20:51.17:0,51,947	1/1:21,11:32:48.15:750,48,0	1/1:5,12:17:36.12:580,36,0	0/0:19,0:18:33.11:0,33,590	0/0:16,0:16:39.12:0,39,696	1/1:13,7:20:27.08:407,27,0	0/0:22,0:22:54.19:0,54,1017	0/0:8,0:8:12.04:0,12,224	1/1:10,14:24:45.07:679,45,0	1/1:10,14:24:48.16:747,48,0	1/1:20,11:31:57.15:853,57,0	0/0:19,0:19:51.17:0,51,955	1/1:8,5:13:27.09:414,27,0	1/1:11,5:16:21.03:305,21,0	1/1:11,5:16:24.02:363,24,0	1/1:3,7:10:24.08:378,24,0	1/1:7,14:22:39:552,39,0	1/1:5,13:18:36.12:588,36,0	0/0:15,0:15:33.11:0,33,623	1/1:10,12:22:48.16:755,48,0	1/1:11,12:23:45.09:668,45,0	1/1:5,5:10:18.04:270,18,0
chr10	38982044	.	TG	T	9638.84	PASS	AB=0.847;AC=35;AF=0.625;AN=56;BaseQRankSum=0.998;DP=498;FS=1.597;HRun=2;HaplotypeScore=95.3898;InbreedingCoeff=0.8062;MQ=75.88;MQ0=2;MQRankSum=-5.305;QD=28.02;ReadPosRankSum=-2.821;VQSLOD=3.8543;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:42.11:0,42,585	0/1:1,1:2:8.18:32,0,8	0/1:18,0:19:4.70:5,0,313	0/1:25,0:21:11.08:11,0,125	1/1:5,26:31:89.94:997,90,0	0/0:18,0:18:51.16:0,51,735	0/0:15,0:15:45.12:0,45,612	1/1:1,24:25:72.21:903,72,0	1/1:2,19:21:63.18:781,63,0	0/0:16,0:16:42.14:0,42,610	0/0:15,0:15:41.33:0,41,557	1/1:3,16:19:48.14:603,48,0	0/0:22,0:22:54.40:0,54,743	0/0:11,0:11:24.07:0,24,337	1/1:6,18:24:66.11:763,66,0	1/1:3,8:11:33.03:367,33,0	1/1:9,14:23:48.37:645,48,0	0/0:17,0:17:51.14:0,51,717	1/1:3,23:26:69.17:836,69,0	1/1:0,10:10:30.03:363,30,0	1/1:2,6:8:24.04:278,24,0	1/1:3,15:18:51.06:608,51,0	1/1:3,16:19:39.31:563,39,0	1/1:5,10:14:44.98:483,45,0	0/0:25,0:24:66.18:0,66,904	1/1:5,11:16:47.60:508,48,0	1/1:5,14:19:35.88:546,36,0	1/1:0,10:10:29.99:347,30,0
chr10	38982046	.	GT	G	2877.52	PASS	AB=0.963;AC=33;AF=0.589;AN=56;BaseQRankSum=11.068;DP=498;FS=0.801;HRun=10;HaplotypeScore=116.6420;InbreedingCoeff=0.4913;MQ=79.09;MQ0=2;MQRankSum=-2.265;QD=7.88;ReadPosRankSum=-1.297;VQSLOD=1.8711;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:42.08:0,42,446	0/1:2,0:2:13.75:14,0,27	0/1:21,2:21:23.70:24,0,197	0/1:25,3:23:73.21:76,0,73	1/1:30,0:30:45.65:297,46,0	0/0:18,0:18:43.15:0,43,521	0/0:15,0:15:36.10:0,36,398	1/1:24,0:24:59.87:261,60,0	1/1:21,0:21:33.37:275,33,0	0/0:18,0:18:51.11:0,51,536	0/0:14,0:14:36.10:0,36,398	1/1:19,0:19:25.72:196,26,0	0/1:21,2:23:7.72:8,0,443	0/0:10,0:10:21.06:0,21,232	1/1:23,0:23:48.24:260,48,0	1/1:11,0:11:19.75:111,20,0	0/1:22,0:22:25.94:169,0,26	0/0:17,0:17:45.12:0,45,498	1/1:23,0:23:49.39:222,49,0	1/1:11,0:11:4.42:116,4,0	1/1:8,0:8:17.04:93,17,0	0/1:19,0:19:5.09:150,0,5	0/1:19,0:19:19.88:183,0,20	1/1:15,0:14:25.78:142,26,0	0/0:25,0:24:54.15:0,54,597	1/1:16,0:16:27.96:144,28,0	1/1:18,0:18:13.49:221,13,0	1/1:10,0:10:22.86:119,23,0
chr10	38982123	.	GA	G	4127.97	PASS	AB=0.656;AC=28;AF=0.500;AN=56;BaseQRankSum=-4.860;DP=547;FS=11.898;HRun=11;HaplotypeScore=81.7775;InbreedingCoeff=0.8301;MQ=72.60;MQ0=2;MQRankSum=-0.073;QD=14.54;ReadPosRankSum=5.849;VQSLOD=2.8659;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:3,1:29:29.87:0,30,252	1/1:0,5:5:8.99:74,9,0	0/0:19,0:17:19.85:0,20,227	0/0:9,0:9:8.94:0,9,72	0/1:12,9:22:47.03:177,0,47	0/0:4,0:18:25.90:0,26,163	0/0:5,0:17:31.66:0,32,177	1/1:7,16:23:19.47:312,19,0	1/1:3,16:19:50.62:405,51,0	0/0:4,0:22:48.21:0,48,304	0/0:5,0:18:49.48:0,49,295	0/0:16,1:17:11.46:0,11,327	0/0:1,0:17:25.67:0,26,129	0/0:5,0:22:40.43:0,40,251	1/1:4,13:18:40.97:326,41,0	1/1:2,14:18:45.93:344,46,0	1/1:4,33:37:57.94:682,58,0	0/0:4,0:19:31.79:0,32,195	1/1:9,7:16:13.57:190,14,0	1/1:10,12:22:25.79:300,26,0	1/1:5,6:12:22.21:160,22,0	0/1:6,9:15:22.18:197,0,22	0/0:28,1:30:44.42:0,44,607	0/0:26,0:26:57.09:0,57,594	1/1:3,0:24:33.52:108,34,0	1/1:13,11:24:27.39:355,27,0	1/1:3,16:19:25.41:325,25,0	1/1:3,6:9:20.96:172,21,0
chr10	38982495	.	TTAA	T	15824.53	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-4.033;DP=553;FS=2.891;HRun=0;HaplotypeScore=124.8545;InbreedingCoeff=0.9139;MQ=69.84;MQ0=2;MQRankSum=-5.732;QD=31.34;ReadPosRankSum=6.240;VQSLOD=4.8466;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,0:46:95.65:519,96,0	1/1:0,4:4:12.04:220,12,0	0/0:30,0:14:28.33:0,28,388	0/0:18,0:10:22.79:0,23,303	1/1:1,23:24:68.73:956,69,0	1/1:0,0:24:55.15:302,55,0	1/1:0,1:15:29.13:198,29,0	1/1:0,32:33:99:1508,99,0	1/1:0,9:9:18.06:329,18,0	1/1:0,0:18:39.80:246,40,0	1/1:1,0:20:30.35:280,30,0	1/1:0,13:13:36.12:645,36,0	1/1:0,0:10:28.94:155,29,0	1/1:0,0:17:37.71:206,38,0	1/1:0,25:25:50.80:890,51,0	1/1:0,7:7:12.04:216,12,0	1/1:0,28:28:66.14:1156,66,0	1/1:0,0:23:52.16:283,52,0	1/1:0,18:18:53.99:782,54,0	1/1:0,24:24:72.04:1120,72,0	1/1:0,23:23:54.16:953,54,0	1/1:0,18:18:47.65:728,48,0	1/1:0,21:21:47.77:809,48,0	1/1:0,19:19:48.16:842,48,0	1/1:0,0:17:40.57:221,41,0	1/1:0,17:18:54.02:867,54,0	1/1:0,25:25:72.25:1287,72,0	1/1:0,6:6:6.02:108,6,0
chr10	38982712	.	G	GT	1093.26	PASS	AB=0.900;AC=12;AF=0.214;AN=56;BaseQRankSum=0.744;DP=600;FS=4.150;HRun=13;HaplotypeScore=73.8717;InbreedingCoeff=0.5282;MQ=68.68;MQ0=0;MQRankSum=0.611;QD=6.83;ReadPosRankSum=-2.711;VQSLOD=2.1062;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:48.93:0,49,448	0/0:12,0:12:26.70:0,27,185	0/0:19,0:16:1.12:0,1,68	0/1:10,1:8:6.85:7,0,13	0/0:28,1:31:19.78:0,20,376	0/0:17,0:19:34.73:0,35,232	0/0:21,0:22:45.86:0,46,311	0/0:24,1:26:11.64:0,12,209	0/0:15,0:15:38.64:0,39,267	0/0:22,1:23:10.65:0,11,218	0/0:25,0:27:34.23:0,34,351	1/1:3,13:17:15.29:270,15,0	0/1:21,2:23:6.91:7,0,242	0/0:13,0:14:14.06:0,14,204	0/1:16,3:21:15.98:16,0,175	0/0:17,0:17:44.59:0,45,308	0/0:32,1:34:48.42:0,48,468	0/0:23,0:23:56.48:0,56,390	0/0:17,0:17:12.20:0,12,149	0/1:27,4:32:32.82:33,0,315	0/0:17,0:17:50.59:0,51,349	0/0:22,3:25:3.78:0,4,314	1/1:4,20:25:36.19:467,36,0	1/1:5,7:12:28.45:238,28,0	1/1:11,0:19:43.99:224,44,0	0/0:21,0:21:46.37:0,46,313	0/0:29,1:29:45.58:0,46,451	0/0:11,0:12:25.75:0,26,170
chr10	38982770	.	AAATT	A	343.07	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.971;DP=619;FS=5.114;HRun=0;HaplotypeScore=99.4111;InbreedingCoeff=0.9966;MQ=81.25;MQ0=0;MQRankSum=-1.519;QD=26.39;ReadPosRankSum=0.869;VQSLOD=3.2845;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:87.30:0,87,2245	0/0:11,0:11:27.09:0,27,707	0/0:19,0:19:48.16:0,48,1074	0/0:17,0:17:39.13:0,39,890	0/0:36,0:36:99:0,105,2707	0/0:19,0:19:57.17:0,57,1386	0/0:16,0:16:42.14:0,42,1100	0/0:26,0:26:69.23:0,69,1724	0/0:17,0:17:51.14:0,51,1228	0/0:21,0:21:57.20:0,57,1437	0/0:23,0:23:66.23:0,66,1729	0/0:15,0:15:36.12:0,36,943	0/0:20,0:20:57.17:0,57,1438	0/0:16,0:16:39.13:0,39,1022	0/0:21,0:21:63.22:0,63,1651	0/0:20,0:20:60.21:0,60,1554	0/0:29,0:29:78.25:0,78,1923	0/0:24,0:24:69.24:0,69,1744	0/0:26,0:26:66.22:0,66,1636	0/0:38,0:38:99:0,111,2846	0/0:17,0:17:45.15:0,45,1178	0/0:31,0:31:78.27:0,78,2010	0/0:20,0:20:57.20:0,57,1471	0/0:19,0:19:54.19:0,54,1414	1/1:1,12:13:24.08:436,24,0	0/0:28,0:28:84.29:0,84,2166	0/0:34,0:33:87.30:0,87,2224	0/0:13,0:13:39.13:0,39,1021
chr10	38984440	.	C	CAA	3521.36	PASS	AB=0.714;AC=17;AF=0.304;AN=56;BaseQRankSum=-2.155;DP=568;FS=3.427;HRun=11;HaplotypeScore=107.6864;InbreedingCoeff=0.9134;MQ=65.97;MQ0=0;MQRankSum=-0.430;QD=22.15;ReadPosRankSum=0.112;VQSLOD=3.1861;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,19:23:37.83:493,38,0	0/0:12,0:12:27:0,27,256	0/0:22,0:19:14.91:0,15,155	0/0:11,0:13:20.12:0,20,183	0/0:20,0:22:38.61:0,39,394	1/1:4,10:15:29.55:377,30,0	1/1:5,15:20:27.09:391,27,0	0/0:31,0:33:71.51:0,72,664	0/0:21,0:21:38.93:0,39,378	1/1:5,12:18:32.51:379,33,0	1/1:0,10:12:32.50:375,33,0	0/0:29,0:29:56.90:0,57,550	1/1:6,13:18:33.10:445,33,0	1/1:4,10:14:20.56:265,21,0	0/0:17,0:16:32.96:0,33,318	0/0:20,0:20:41.74:0,42,390	0/0:23,0:23:44.95:0,45,436	1/1:3,20:26:53.15:694,53,0	0/0:17,0:17:32.97:0,33,312	0/0:16,0:16:32.96:0,33,320	0/0:19,0:20:35.91:0,36,386	0/0:20,0:20:47.96:0,48,465	0/0:23,0:24:50.71:0,51,472	0/0:30,0:32:68.51:0,69,633	0/1:6,2:10:14.75:102,0,15	0/0:27,0:27:50.98:0,51,495	0/0:24,0:24:60.03:0,60,582	0/0:13,0:13:29.99:0,30,291
chr10	38984511	.	AACAC	A	4856.10	PASS	AB=0.689;AC=12;AF=0.214;AN=56;BaseQRankSum=4.077;DP=667;FS=2.264;HRun=0;HaplotypeScore=276.2349;InbreedingCoeff=0.0756;MQ=51.08;MQ0=7;MQRankSum=-8.806;QD=24.53;ReadPosRankSum=0.333;VQSLOD=4.1408;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:14,15:28:34.88:565,0,35	0/0:10,0:10:21.54:0,22,536	0/0:41,0:26:58.99:0,59,1164	0/0:48,0:36:68.19:0,68,1223	0/0:27,0:26:48.05:0,48,1139	0/1:8,12:18:33.62:578,0,34	0/1:7,13:20:13.52:505,0,14	0/0:30,0:26:56.40:0,56,1237	0/0:30,0:29:67.60:0,68,1481	0/1:11,11:20:29.77:532,0,30	1/1:5,14:18:24.46:702,24,0	0/0:28,0:27:20.34:0,20,432	0/1:8,16:24:58.22:738,0,58	0/1:6,11:17:38.53:485,0,39	0/0:26,0:26:72.16:0,72,1530	0/0:22,0:23:61.86:0,62,1143	0/1:20,0:19:40.89:41,0,250	0/1:10,5:15:30.99:368,0,31	0/0:17,0:15:41.75:0,42,827	0/0:26,0:26:70.71:0,71,1606	0/0:25,0:22:19.05:0,19,629	0/0:30,0:30:55.35:0,55,1183	0/0:35,0:34:49.64:0,50,1557	0/0:22,0:21:15.24:0,15,679	1/1:5,7:12:0.39:342,0,0	0/0:23,1:24:14.25:0,14,1233	0/0:17,0:16:42.02:0,42,942	0/0:9,0:9:21.07:0,21,479
chr10	38984515	.	C	CACACAA	7244.50	PASS	AB=1.000;AC=24;AF=0.429;AN=56;BaseQRankSum=6.619;DP=684;FS=1.113;HRun=0;HaplotypeScore=306.3578;InbreedingCoeff=0.5483;MQ=47.95;MQ0=11;MQRankSum=-11.324;QD=21.12;ReadPosRankSum=-4.420;VQSLOD=3.2250;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:28,2:29:23.52:729,24,0	0/0:9,0:9:21.46:0,21,370	0/0:43,0:25:61.94:0,62,1092	0/0:53,0:35:66.81:0,67,1145	0/0:26,0:25:31.44:0,31,886	1/1:20,0:18:13.75:809,14,0	1/1:22,0:20:14.53:556,15,0	0/1:38,0:32:19.21:19,0,1039	0/0:30,0:29:22.78:0,23,842	1/1:24,0:22:25.06:652,25,0	1/1:19,0:18:20.44:862,20,0	0/0:29,0:28:26.95:0,27,348	1/1:24,0:23:43.79:1133,44,0	1/1:16,0:16:27.26:735,27,0	0/1:27,0:27:46.04:46,0,742	0/1:23,0:23:99:131,0,571	0/0:18,0:17:19.48:0,19,335	1/1:14,2:16:38.13:776,38,0	0/0:19,0:16:11.16:0,11,672	0/0:25,0:25:56.51:0,57,1145	0/0:25,0:20:33.42:0,33,603	0/1:28,0:28:41.95:42,0,574	0/0:33,0:32:62.42:0,62,1090	0/0:22,0:21:38.97:0,39,594	1/1:13,0:13:21.25:412,21,0	0/1:27,0:27:99:302,0,636	0/1:16,0:15:40.56:41,0,451	0/0:9,0:9:21.07:0,21,401
chr10	38984535	.	AAC	A	1718.99	PASS	AB=0.963;AC=18;AF=0.321;AN=56;BaseQRankSum=-1.670;DP=736;FS=13.695;HRun=0;HaplotypeScore=294.4525;InbreedingCoeff=-0.3014;MQ=32.22;MQ0=30;MQRankSum=-2.467;QD=4.17;ReadPosRankSum=-5.665;VQSLOD=0.4594;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,1:31:9.88:0,10,228	0/1:9,0:9:12.80:29,0,13	0/0:71,0:22:48.14:0,48,699	0/0:70,0:15:27.02:0,27,346	0/1:24,2:24:88.76:188,0,89	0/0:22,0:18:38.53:0,39,302	0/0:21,0:19:29.70:0,30,226	0/1:31,4:28:59.20:210,0,59	0/1:32,1:31:71.71:193,0,72	0/0:27,0:23:39.94:0,40,360	0/0:18,0:16:21.07:0,21,135	0/1:27,0:26:21.18:38,0,21	0/0:23,0:22:19.19:0,19,218	0/0:20,0:18:24.83:0,25,199	0/1:24,3:25:54.22:100,0,54	0/1:25,0:24:56.45:147,0,56	1/1:16,0:15:11.12:54,11,0	0/0:15,0:15:24.79:0,25,204	0/1:21,1:19:57.75:58,0,109	0/1:24,0:24:0.57:1,0,112	0/1:22,1:18:50.87:51,0,85	0/1:26,1:27:87:261,0,87	0/1:35,0:34:74.90:116,0,75	0/1:23,0:22:26.57:27,0,51	0/1:11,1:12:9.69:10,0,144	0/1:31,1:32:62.65:328,0,63	0/1:15,1:15:66.39:70,0,66	0/0:5,0:5:5.78:0,6,32
chr10	38984547	.	CATA	C	5341.40	PASS	AB=0.961;AC=30;AF=0.536;AN=56;BaseQRankSum=6.919;DP=730;FS=0.742;HRun=0;HaplotypeScore=300.5900;InbreedingCoeff=-0.4676;MQ=28.92;MQ0=33;MQRankSum=-0.066;QD=9.85;ReadPosRankSum=5.551;VQSLOD=3.8667;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:28,1:28:99:194,0,120	1/1:5,0:5:1.39:82,1,0	0/0:68,0:19:54.18:0,54,1191	0/0:76,1:14:33.01:0,33,566	0/1:26,0:23:68.93:208,0,69	0/1:21,2:19:19.75:165,0,20	0/1:21,1:20:46.84:83,0,47	0/0:42,0:35:16.51:0,17,1080	0/1:29,3:30:99:493,0,161	0/1:26,1:23:85.73:86,0,288	1/1:17,1:16:4.36:107,4,0	1/1:21,4:24:27.09:404,27,0	0/1:20,0:20:59.08:169,0,59	0/1:19,0:17:63.13:96,0,63	0/1:28,0:26:99:419,0,113	0/1:25,1:26:99:411,0,136	0/1:15,1:15:17.09:99,0,17	0/1:15,1:16:42.51:165,0,43	0/1:19,0:16:44.33:44,0,357	1/1:22,0:22:4.69:352,5,0	0/1:18,2:15:17.23:17,0,48	0/1:31,0:30:99:311,0,172	1/1:26,6:30:13.75:579,14,0	0/1:16,4:19:29.16:159,0,29	0/1:12,1:13:4.14:101,0,4	0/1:34,1:35:99:312,0,465	0/1:14,0:13:50.68:268,0,51	0/1:2,0:2:6.77:16,0,7
chr10	38984548	.	AT	A	8601.90	PASS	AB=0.706;AC=33;AF=0.589;AN=56;BaseQRankSum=4.110;DP=718;FS=2.566;HRun=1;HaplotypeScore=274.1571;InbreedingCoeff=-0.4693;MQ=28.54;MQ0=32;MQRankSum=1.267;QD=15.04;ReadPosRankSum=1.892;VQSLOD=4.6641;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:16,13:28:99:416,0,133	1/1:2,3:5:3.90:118,4,0	0/0:68,0:18:54.18:0,54,838	0/0:78,0:14:32.88:0,33,430	0/1:10,15:23:15.24:443,0,15	0/1:12,9:17:80.30:318,0,80	0/1:8,13:19:47.57:225,0,48	0/1:32,11:36:99:125,0,792	0/1:16,16:30:86.83:606,0,87	0/1:18,7:21:99:180,0,381	1/1:5,13:16:4.17:297,4,0	1/1:17,5:21:26.77:257,27,0	0/1:8,13:20:57.32:425,0,57	0/1:8,10:16:85.13:267,0,85	0/1:13,15:26:33.44:571,0,33	0/1:12,15:26:56.84:624,0,57	0/1:14,1:14:32.92:34,0,33	0/1:9,7:16:76.63:328,0,77	0/1:12,5:14:99:168,0,259	1/1:5,15:20:24.82:542,25,0	0/1:9,10:15:11.74:145,0,12	0/1:17,15:31:40.72:569,0,41	1/1:9,23:30:11.31:740,11,0	1/1:11,9:19:0.93:223,1,0	0/1:12,1:13:49.02:49,0,86	0/1:21,14:35:99:454,0,327	0/1:5,10:15:23.81:396,0,24	1/1:0,2:2:6.02:84,6,0
chr10	38984550	.	A	AC	4399.62	PASS	AB=0.961;AC=30;AF=0.536;AN=56;BaseQRankSum=7.106;DP=728;FS=0.000;HRun=0;HaplotypeScore=299.6350;InbreedingCoeff=-0.6501;MQ=27.80;MQ0=31;MQRankSum=0.767;QD=7.53;ReadPosRankSum=2.957;VQSLOD=4.1639;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:25,4:28:99:334,0,129	0/1:4,1:5:14.31:53,0,14	0/0:68,0:18:54.18:0,54,739	0/0:76,0:13:30.05:0,30,387	0/1:26,0:23:99:113,0,166	0/1:20,1:17:72.25:286,0,72	0/1:21,0:19:38.41:170,0,38	0/1:42,0:35:28.29:28,0,854	0/1:31,1:31:99:182,0,221	0/1:27,0:23:99:119,0,334	0/1:18,0:16:8.53:285,0,9	1/1:20,2:21:25.98:185,26,0	0/1:20,1:20:68.91:260,0,69	0/1:17,1:16:73.73:228,0,74	0/1:28,0:26:99:230,0,132	0/1:27,0:26:99:201,0,181	0/1:12,3:14:57.65:58,0,58	0/1:13,2:16:59.23:273,0,59	0/1:20,0:17:62.96:63,0,282	1/1:21,0:21:0.01:120,0,0	0/1:17,1:14:49.60:52,0,50	0/1:32,0:31:99:159,0,262	0/1:33,0:31:51.34:306,0,51	1/1:22,2:23:1.28:160,1,0	0/1:14,0:14:79.37:79,0,102	0/1:34,0:34:99:238,0,507	0/1:16,0:15:61.86:189,0,62	1/1:3,0:3:3.54:29,4,0
chr10	38984554	.	CACAA	C	5575.39	PASS	AB=1.000;AC=34;AF=0.607;AN=56;BaseQRankSum=6.940;DP=742;FS=2.131;HRun=0;HaplotypeScore=315.9943;InbreedingCoeff=-0.1288;MQ=27.45;MQ0=34;MQRankSum=1.927;QD=10.23;ReadPosRankSum=4.083;VQSLOD=3.5925;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:31,0:30:22.31:282,22,0	1/1:5,0:5:11.73:87,12,0	0/0:63,0:17:45.03:0,45,768	0/0:71,0:13:3.13:0,3,235	0/1:26,0:23:99:151,0,172	1/1:12,9:17:47.73:537,48,0	1/1:19,4:20:27.73:219,28,0	0/0:44,0:37:16.59:0,17,627	0/1:33,0:31:99:310,0,381	0/1:27,0:23:88.10:418,0,88	1/1:18,0:16:25.20:161,25,0	0/1:25,0:24:68.47:75,0,68	1/1:21,0:20:20.08:319,20,0	1/1:18,0:16:34.52:312,35,0	0/1:28,0:26:99:317,0,221	0/1:27,0:26:99:323,0,258	0/0:16,0:15:6.03:0,6,54	1/1:16,0:16:25.85:160,26,0	0/1:19,0:16:72.90:73,0,147	0/1:22,0:22:40.72:298,0,41	0/1:22,0:16:24.87:25,0,66	0/1:33,0:32:99:206,0,398	1/1:32,0:30:0.31:345,0,0	0/1:25,0:24:65.99:82,0,66	1/1:8,5:13:25.38:290,25,0	0/1:36,0:35:99:336,0,484	0/1:19,0:18:99:225,0,208	0/1:5,0:5:13.71:28,0,14
chr10	38984556	.	CAA	C	5458.43	PASS	AB=0.777;AC=32;AF=0.571;AN=56;BaseQRankSum=6.085;DP=742;FS=0.733;HRun=3;HaplotypeScore=306.2850;InbreedingCoeff=-0.1425;MQ=27.26;MQ0=33;MQRankSum=-0.749;QD=9.96;ReadPosRankSum=4.452;VQSLOD=1.1648;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:23,6:29:26.02:387,26,0	0/1:2,3:5:1.23:66,0,1	0/0:60,0:16:44.98:0,45,584	0/0:71,0:12:3.75:0,4,222	0/1:19,7:23:99:118,0,159	1/1:21,0:17:45.59:269,46,0	1/1:23,1:21:24.99:149,25,0	0/0:47,0:40:33.14:0,33,1043	0/1:23,11:32:99:320,0,346	0/1:12,13:21:37.17:433,0,37	1/1:13,4:15:28.75:200,29,0	0/1:21,4:24:76.09:76,0,96	1/1:15,5:19:21.41:389,21,0	1/1:12,7:17:37.16:405,37,0	0/1:14,14:26:99:339,0,203	0/1:17,11:28:99:342,0,291	0/0:16,0:15:10.76:0,11,96	1/1:14,3:17:37.44:293,37,0	0/1:17,2:16:69.60:70,0,228	0/1:12,10:22:37.99:316,0,38	0/1:23,0:15:3.25:3,0,46	0/1:19,12:30:99:223,0,348	0/1:16,16:30:99:320,0,107	0/1:21,4:24:21.26:43,0,21	1/1:14,0:14:22.64:147,23,0	0/1:28,9:36:99:289,0,566	0/1:11,8:19:99:238,0,166	0/1:6,0:6:12.34:25,0,12
chr10	38984557	.	A	ACACACAT	8575.16	PASS	AB=0.988;AC=31;AF=0.554;AN=56;BaseQRankSum=4.217;DP=725;FS=2.044;HRun=0;HaplotypeScore=339.0924;InbreedingCoeff=-0.2450;MQ=27.10;MQ0=32;MQRankSum=1.264;QD=15.29;ReadPosRankSum=4.052;VQSLOD=2.9814;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:29,1:29:16.87:714,17,0	0/1:4,0:4:8.03:100,0,8	0/0:56,0:16:45.03:0,45,990	0/0:68,0:12:27.03:0,27,460	0/1:25,0:22:99:135,0,342	1/1:21,0:17:31.87:756,32,0	1/1:24,0:21:21.44:456,21,0	0/1:45,0:40:26.89:27,0,1556	0/1:34,0:32:99:296,0,645	0/1:24,1:21:14.49:288,0,14	1/1:15,1:14:13.60:681,14,0	0/1:25,0:24:91.47:91,0,181	1/1:16,1:18:44.72:851,45,0	1/1:15,2:15:33.50:777,33,0	0/1:28,0:26:99:444,0,361	0/1:29,0:28:99:415,0,499	0/0:16,0:15:5.25:0,5,240	0/1:14,2:16:50.34:587,0,50	0/1:18,0:15:46.23:46,0,465	0/1:21,0:21:79.17:261,0,79	0/0:20,0:14:14.91:0,15,146	0/1:30,0:29:99:269,0,753	0/1:32,0:30:99:398,0,207	0/1:25,0:24:57.08:57,0,171	1/1:14,0:14:16.84:240,17,0	0/1:36,1:36:99:465,0,966	0/1:19,0:18:99:182,0,287	0/1:6,0:6:37.66:38,0,66
chr10	38984563	.	A	AT	1140.80	PASS	AB=0.953;AC=15;AF=0.268;AN=56;BaseQRankSum=6.579;DP=711;FS=0.413;HRun=0;HaplotypeScore=313.3624;InbreedingCoeff=-0.3674;MQ=26.99;MQ0=37;MQRankSum=0.427;QD=3.88;ReadPosRankSum=-0.570;VQSLOD=2.3113;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:22,4:26:98.96:99,0,161	0/1:4,0:4:16.83:25,0,17	0/0:51,0:13:36.12:0,36,502	0/0:66,0:10:26.91:0,27,331	0/0:22,0:20:19.60:0,20,397	0/1:20,0:16:95.93:117,0,96	0/1:21,0:18:51.63:103,0,52	0/0:46,0:46:92.74:0,93,1360	0/0:32,0:34:26.69:0,27,528	0/0:22,2:20:17.45:0,17,500	0/1:11,5:14:20.54:155,0,21	0/0:24,0:23:23.54:0,24,339	0/1:14,3:16:99:197,0,111	0/1:13,4:15:67.82:176,0,68	0/1:28,0:26:99:100,0,279	0/1:27,0:28:48.40:48,0,364	0/0:18,0:17:18.95:0,19,235	0/1:16,0:16:99:119,0,226	0/0:21,0:18:34.83:0,35,462	0/0:18,0:19:2.10:0,2,96	0/0:24,0:15:11.80:0,12,134	0/1:30,0:29:41.19:41,0,472	0/1:29,0:29:63.85:64,0,295	0/0:23,0:23:16.48:0,16,167	0/1:15,0:15:39.68:40,0,67	0/0:38,0:38:4.82:0,5,686	0/1:18,0:17:2.77:3,0,296	0/1:4,0:5:4.97:5,0,104
chr10	38984565	.	AC	A	3048.32	PASS	AB=0.797;AC=24;AF=0.429;AN=56;BaseQRankSum=7.866;DP=717;FS=0.744;HRun=1;HaplotypeScore=305.1500;InbreedingCoeff=-0.4883;MQ=26.80;MQ0=37;MQRankSum=1.279;QD=6.01;ReadPosRankSum=2.896;VQSLOD=0.4215;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:25,1:25:22.69:69,0,23	0/1:2,3:5:4.53:50,0,5	0/0:51,0:14:36.12:0,36,537	0/0:63,0:10:27.03:0,27,356	0/1:15,7:19:64.80:65,0,278	0/1:15,6:17:81.07:192,0,81	0/1:12,10:19:15.80:110,0,16	0/0:47,0:44:99:0,104,1556	0/1:25,11:35:99:270,0,546	0/1:25,0:21:34.93:35,0,249	1/1:11,5:14:3.94:100,4,0	0/1:21,4:24:51:51,0,383	0/1:16,1:15:43.59:175,0,44	1/1:15,2:15:21.60:166,22,0	0/1:16,14:28:99:331,0,280	0/1:18,11:28:99:293,0,345	0/0:18,0:17:17.57:0,18,230	0/1:12,4:16:79.86:80,0,162	0/1:22,2:20:9.67:10,0,467	0/1:9,10:19:69.12:264,0,69	0/0:21,0:14:10:0,10,95	0/1:18,12:29:99:224,0,447	0/1:15,16:29:99:285,0,194	0/1:21,4:25:39.98:40,0,95	0/1:14,0:14:27.57:47,0,28	0/1:30,8:37:99:166,0,704	0/1:11,8:19:99:185,0,326	0/0:6,0:6:0.04:0,0,90
chr10	38984568	.	C	CAA	3687.02	PASS	AB=0.975;AC=31;AF=0.554;AN=56;BaseQRankSum=-2.425;DP=716;FS=8.270;HRun=1;HaplotypeScore=318.1012;InbreedingCoeff=-0.1272;MQ=27.09;MQ0=32;MQRankSum=-0.718;QD=6.62;ReadPosRankSum=3.798;VQSLOD=-0.5099;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:26:5.73:0,6,77	1/1:5,0:5:8.20:75,8,0	0/0:50,0:15:35.96:0,36,410	0/0:60,0:10:7.48:0,7,184	1/1:21,0:18:22.27:300,22,0	0/1:22,0:18:6.83:62,0,7	1/1:23,0:20:1.89:62,2,0	0/1:40,7:43:26.08:919,0,26	0/1:35,0:34:40.54:150,0,41	0/1:27,0:23:65.39:65,0,108	0/0:16,0:14:2.81:0,3,63	0/1:26,0:25:43.84:44,0,132	0/1:18,0:16:25.75:26,0,65	0/1:18,0:16:19.07:23,0,19	1/1:29,1:28:2.43:170,2,0	1/1:29,0:28:26.06:278,26,0	0/1:15,0:15:2.08:38,0,2	0/1:16,0:16:5.23:5,0,90	0/1:20,4:21:46.66:294,0,47	0/1:17,1:18:6.82:97,0,7	0/1:23,0:14:7.24:7,0,71	1/1:31,1:31:27.06:294,27,0	0/1:30,0:28:24.51:144,0,25	0/1:25,0:25:53.77:54,0,91	1/1:17,0:17:14.06:79,14,0	1/1:36,1:36:12.44:395,12,0	0/1:18,0:18:44.49:106,0,44	0/0:6,0:6:14.64:0,15,93
chr10	38984574	.	AAC	A	2211.20	PASS	AB=0.908;AC=26;AF=0.464;AN=56;BaseQRankSum=-5.666;DP=678;FS=8.323;HRun=0;HaplotypeScore=307.2123;InbreedingCoeff=-0.1352;MQ=27.56;MQ0=27;MQRankSum=-0.109;QD=4.60;ReadPosRankSum=1.396;VQSLOD=0.8642;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:20,4:23:29.08:103,0,29	1/1:6,0:6:0.47:1,0,0	0/0:36,0:9:12.01:0,12,142	0/0:51,0:10:9.03:0,9,144	0/0:21,0:18:17.91:0,18,115	0/1:12,9:17:4.83:238,0,5	1/1:17,4:18:14.53:153,15,0	0/1:47,3:46:99:383,0,226	0/1:34,0:33:27.69:28,0,134	0/1:18,12:26:99:355,0,103	0/1:11,4:13:6.09:60,0,6	0/0:23,0:22:24.36:0,24,183	0/1:10,5:13:27.05:224,0,27	1/1:14,7:19:18.20:202,18,0	0/1:30,0:28:4.43:4,0,103	0/1:28,0:27:23.30:23,0,67	0/1:13,0:13:18.62:66,0,19	0/1:11,1:12:45.89:50,0,46	0/1:19,3:20:99:108,0,134	0/0:18,0:18:29.66:0,30,163	0/1:23,0:14:25.06:25,0,49	0/1:32,0:31:66.29:66,0,70	0/0:28,0:26:37.82:0,38,243	0/1:26,0:26:4.46:4,0,100	1/1:13,4:17:16.98:166,17,0	0/1:35,1:35:64.57:65,0,124	0/0:18,1:18:14.83:0,15,152	1/1:5,0:5:9.88:58,10,0
chr10	38984576	.	C	CACAA	4499.35	PASS	AB=0.986;AC=30;AF=0.536;AN=56;BaseQRankSum=-2.612;DP=665;FS=9.483;HRun=0;HaplotypeScore=310.4696;InbreedingCoeff=-0.4896;MQ=27.65;MQ0=29;MQRankSum=-0.135;QD=8.01;ReadPosRankSum=1.419;VQSLOD=2.1924;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:22:53.67:75,0,54	1/1:6,0:6:2.03:5,2,0	0/0:34,0:8:12.03:0,12,163	0/0:45,0:8:14.68:0,15,191	0/1:21,0:18:41.74:42,0,59	0/1:20,1:17:25.54:384,0,26	1/1:21,0:18:15.65:229,16,0	0/1:49,0:46:99:751,0,286	0/1:34,0:33:99:157,0,115	0/1:29,2:27:57.90:511,0,58	1/1:15,0:13:20.15:173,20,0	0/1:23,0:22:99:196,0,145	0/1:14,1:13:49.91:284,0,50	1/1:21,0:19:33.70:232,34,0	0/1:28,0:26:53.86:54,0,87	0/1:28,0:27:33.33:107,0,33	0/1:13,0:13:35.97:36,0,56	0/1:12,0:12:82.96:145,0,83	0/1:23,0:21:99:275,0,161	0/1:18,0:17:9.80:10,0,100	0/0:24,0:14:0.45:0,0,101	0/1:31,0:30:37.82:173,0,38	0/1:26,0:25:66.65:67,0,111	0/1:25,1:26:99:152,0,167	1/1:17,0:17:18.30:151,18,0	0/1:35,0:34:49.35:220,0,49	0/1:19,0:18:51.59:52,0,126	0/1:5,0:5:11.52:19,0,12
chr10	38984584	.	CAT	C	1389.10	PASS	AB=0.960;AC=29;AF=0.518;AN=56;BaseQRankSum=2.456;DP=627;FS=5.167;HRun=0;HaplotypeScore=285.4350;InbreedingCoeff=-0.1164;MQ=28.52;MQ0=24;MQRankSum=-0.116;QD=2.88;ReadPosRankSum=-0.910;VQSLOD=1.7846;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:24,1:24:50.16:50,0,70	1/1:4,1:5:5.88:36,6,0	0/0:22,0:4:11.99:0,12,160	0/0:31,0:7:4.99:0,5,133	0/0:21,0:18:7.78:0,8,136	1/1:21,1:18:12.53:177,13,0	1/1:18,1:16:13.01:73,13,0	0/1:48,0:43:33.89:34,0,380	0/1:35,3:37:75.55:76,0,131	0/1:31,0:27:99:124,0,201	1/1:12,0:10:8.82:47,9,0	0/0:25,0:24:13.45:0,13,185	0/1:14,0:12:51.16:121,0,51	1/1:20,0:18:24.61:138,25,0	0/1:22,3:23:12.52:13,0,102	0/1:24,2:25:52.10:52,0,87	0/1:11,1:13:26.99:27,0,28	0/1:11,0:11:51.59:52,0,62	0/1:20,1:18:53.19:53,0,172	0/0:18,0:17:6.91:0,7,49	0/1:22,0:13:5.80:6,0,38	0/1:26,2:27:43.30:43,0,134	0/0:27,0:25:9:0,9,97	0/1:27,0:27:3.19:3,0,72	1/1:11,5:16:29.31:199,29,0	0/1:30,2:31:35.78:36,0,248	0/1:20,0:19:29.32:29,0,89	1/1:4,2:6:17.97:177,18,0
chr10	38984594	.	CAAAT	C	2757.07	PASS	AB=0.933;AC=28;AF=0.500;AN=56;BaseQRankSum=-4.134;DP=591;FS=66.340;HRun=0;HaplotypeScore=264.6156;InbreedingCoeff=-0.7253;MQ=30.24;MQ0=22;MQRankSum=1.940;QD=5.00;ReadPosRankSum=3.991;VQSLOD=0.5243;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:20,0:22:28.76:83,0,29	1/1:4,1:5:6.02:73,6,0	0/0:17,0:3:8.30:0,8,57	0/0:23,0:5:11.58:0,12,138	0/1:15,1:14:41.37:41,0,141	0/1:18,0:16:24.76:109,0,25	0/1:14,1:14:16.40:60,0,16	0/1:47,0:42:99:126,0,692	0/1:33,3:35:99:188,0,208	0/1:27,1:25:99:159,0,342	0/1:11,0:10:12.92:117,0,13	0/1:27,0:27:73.54:112,0,74	0/1:13,0:13:41.15:41,0,111	0/1:18,0:20:55.44:58,0,55	0/1:21,2:21:88.90:130,0,89	0/1:30,1:30:99:177,0,165	0/1:10,1:13:54.99:66,0,55	0/1:13,0:12:74.52:75,0,109	0/1:18,2:16:99:167,0,288	0/1:18,0:17:29.22:81,0,29	0/1:19,0:13:12.51:22,0,13	0/1:24,1:25:99:101,0,168	0/1:24,0:22:11.47:73,0,11	0/1:24,0:26:13.34:77,0,13	0/1:12,4:16:19.45:190,0,19	0/1:25,0:25:99:108,0,698	0/1:22,0:22:99:286,0,124	1/1:4,2:6:17.54:191,18,0
chr10	38985702	.	GGTGTGT	G	1581.14	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=3.458;DP=651;FS=0.762;HRun=0;HaplotypeScore=160.8209;InbreedingCoeff=0.7137;MQ=62.11;MQ0=5;MQRankSum=-5.160;QD=12.55;ReadPosRankSum=2.141;VQSLOD=2.9053;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:35.75:0,36,758	1/1:1,2:5:8.70:134,9,0	0/0:27,0:16:6:0,6,64	0/0:41,0:25:5.99:0,6,62	1/1:10,11:22:5.85:104,6,0	0/0:15,0:28:3.01:0,3,79	0/0:24,0:35:5.52:0,6,39	0/0:29,0:29:36.10:0,36,740	1/1:6,13:21:30.10:597,30,0	0/0:33,0:32:43.01:0,43,859	0/0:11,0:16:5.94:0,6,42	0/0:17,0:18:15.04:0,15,293	0/0:13,0:22:6.70:0,7,158	0/0:8,0:14:8.96:0,9,148	1/1:6,10:16:11.54:246,12,0	1/1:9,7:15:15.05:308,15,0	1/1:22,10:33:9.03:185,9,0	0/0:9,0:16:5.99:0,6,58	0/0:27,0:33:36.02:0,36,654	0/0:11,0:14:3.01:0,3,79	0/0:36,0:39:21.94:0,22,500	1/1:6,6:13:9.03:181,9,0	0/0:23,0:23:9.03:0,9,232	0/0:19,0:19:2.74:0,3,24	0/0:21,0:21:9.03:0,9,232	0/0:16,0:25:51.01:0,51,980	0/0:18,0:18:21.03:0,21,428	0/0:6,0:10:15.01:0,15,282
chr10	38985739	.	G	GTGTGTGTGT	1455.76	PASS	AB=1.000;AC=16;AF=0.286;AN=56;BaseQRankSum=-0.885;DP=585;FS=10.314;HRun=0;HaplotypeScore=210.7000;InbreedingCoeff=-0.2360;MQ=54.78;MQ0=5;MQRankSum=-2.783;QD=4.51;ReadPosRankSum=-5.357;VQSLOD=-0.0464;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:41,0:41:99:239,0,403	0/0:9,0:9:21.01:0,21,284	0/0:9,0:5:6.01:0,6,110	0/0:18,0:5:4.64:0,5,40	0/0:29,0:29:33.42:0,33,361	0/1:25,0:24:20.31:20,0,244	0/0:22,0:22:26.87:0,27,343	0/1:21,0:21:99:141,0,345	0/0:28,0:28:63.02:0,63,988	0/1:26,0:25:99:250,0,479	0/0:16,0:16:26.86:0,27,344	1/1:1,0:23:12.04:227,12,0	0/1:15,0:15:99:141,0,210	0/0:16,0:16:19.71:0,20,299	0/0:25,0:25:44.55:0,45,546	0/0:22,0:21:37.48:0,37,632	0/0:27,0:27:29.95:0,30,456	0/1:13,0:12:42.29:42,0,314	0/1:20,0:20:22.84:23,0,349	0/1:11,0:11:32.22:32,0,103	0/1:31,0:31:7.04:7,0,366	0/0:15,0:15:29.95:0,30,359	0/1:25,0:25:98.38:98,0,135	0/0:1,1:26:1.41:0,1,2	0/1:27,0:27:99:109,0,343	0/1:21,0:21:99:207,0,293	0/1:14,0:14:29.17:29,0,327	0/1:10,0:10:50.15:50,0,168
chr10	38986598	.	G	GTT	8190.90	PASS	AB=1.000;AC=51;AF=0.911;AN=56;BaseQRankSum=-2.329;DP=563;FS=3.809;HRun=11;HaplotypeScore=106.3740;InbreedingCoeff=0.6073;MQ=61.82;MQ0=8;MQRankSum=-0.034;QD=15.97;ReadPosRankSum=4.843;VQSLOD=3.7350;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,36:45:71.49:966,71,0	1/1:10,0:10:15.01:137,15,0	0/0:23,0:11:19.46:0,19,131	0/0:27,0:17:18.73:0,19,161	1/1:25,0:25:26.88:228,27,0	1/1:2,13:18:30.08:387,30,0	1/1:8,11:19:53.35:695,53,0	0/1:23,0:35:44.30:278,0,44	1/1:18,0:18:14.78:130,15,0	1/1:5,25:30:67.17:831,67,0	1/1:1,23:27:71.02:832,71,0	1/1:14,0:14:2.05:6,2,0	1/1:9,6:15:35.47:450,35,0	1/1:3,11:15:23.57:311,24,0	1/1:14,0:14:12:105,12,0	1/1:11,0:11:12:105,12,0	1/1:19,0:18:12:105,12,0	1/1:5,19:26:46.02:609,46,0	1/1:23,0:22:32.33:229,32,0	1/1:25,0:25:32.88:272,33,0	1/1:6,0:6:9:79,9,0	1/1:15,0:15:23.91:206,24,0	1/1:4,0:17:6.01:57,6,0	1/1:7,0:20:5.55:48,6,0	1/1:3,22:25:45.15:642,45,0	1/1:19,0:19:35.22:271,35,0	1/1:11,0:11:12:105,12,0	1/1:9,0:9:12:105,12,0
chr10	38986600	.	T	TTTTTGTTTTTTG	17583.18	PASS	AB=1.000;AC=33;AF=0.589;AN=56;BaseQRankSum=-12.513;DP=642;FS=2.998;HRun=0;HaplotypeScore=165.7371;InbreedingCoeff=0.8876;MQ=58.01;MQ0=10;MQRankSum=-8.473;QD=47.78;ReadPosRankSum=-2.088;VQSLOD=4.5446;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:81.75:0,82,1272	1/1:2,9:13:15.05:770,15,0	0/0:22,0:10:23.86:0,24,371	0/0:28,0:16:24.48:0,24,484	1/1:1,19:35:41.61:1352,42,0	0/0:18,0:18:22.55:0,23,334	0/0:19,0:19:46.29:0,46,624	1/1:35,0:35:82.85:2159,83,0	1/1:1,13:24:13.93:878,14,0	0/0:31,0:30:62.83:0,63,795	0/0:27,0:27:36.30:0,36,697	1/1:14,0:14:28.65:266,29,0	0/0:16,0:16:32.52:0,33,469	0/0:14,0:14:23.41:0,23,429	1/1:2,9:19:12:704,12,0	1/1:2,11:15:12.50:705,13,0	1/1:3,11:21:12.02:705,12,0	0/0:26,0:26:47.63:0,48,718	1/1:3,12:27:75.21:2447,75,0	1/1:4,19:34:36.99:1623,37,0	1/1:1,5:7:9.02:528,9,0	1/1:3,13:24:24.06:1186,24,0	0/1:14,0:14:15.24:268,0,15	1/1:20,0:20:11.36:377,11,0	0/0:26,0:26:38.93:0,39,636	1/1:2,13:26:56.99:2203,57,0	1/1:0,7:23:12.04:705,12,0	1/1:0,8:13:12.04:705,12,0
chr10	38986603	.	T	TTG	4327.75	PASS	AB=0.987;AC=36;AF=0.643;AN=56;BaseQRankSum=4.013;DP=607;FS=7.290;HRun=0;HaplotypeScore=123.8729;InbreedingCoeff=-0.2710;MQ=55.02;MQ0=12;MQRankSum=-3.795;QD=7.78;ReadPosRankSum=8.787;VQSLOD=2.9775;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:48,0:48:99:272,0,123	1/1:13,0:12:14.94:136,15,0	0/0:22,0:8:23.36:0,23,239	0/0:29,0:15:25.72:0,26,357	0/1:29,0:29:26.89:200,0,27	1/1:18,0:18:13.87:117,14,0	1/1:19,0:19:9.55:217,10,0	0/1:24,9:33:99:616,0,184	0/1:22,0:22:9.09:91,0,9	0/1:31,0:30:84.59:197,0,85	0/1:28,0:28:28.91:220,0,29	1/1:13,0:13:14.46:134,14,0	0/1:14,0:14:31.59:105,0,32	0/1:15,0:15:33.73:89,0,34	0/1:18,0:18:10.91:73,0,11	1/1:15,0:14:11.92:88,12,0	0/1:19,0:19:22.77:89,0,23	0/1:25,0:25:32.27:165,0,32	1/1:21,0:20:27.59:302,28,0	1/1:27,0:27:5.47:199,5,0	0/1:7,0:7:13.87:54,0,14	0/1:24,0:24:16.45:184,0,16	0/1:13,0:13:17.85:32,0,18	0/1:18,0:18:23.26:38,0,23	0/1:29,0:29:74.07:201,0,74	1/1:22,0:22:6.54:334,7,0	1/1:22,0:22:11.92:88,12,0	1/1:13,0:13:11.93:88,12,0
chr10	38987028	.	C	CAG	849.20	PASS	AB=0.862;AC=29;AF=0.659;AN=44;BaseQRankSum=-0.122;DP=490;FS=19.094;HRun=0;HaplotypeScore=94.4595;InbreedingCoeff=0.1922;MQ=69.96;MQ0=13;MQRankSum=-2.258;QD=3.00;ReadPosRankSum=-0.014;VQSLOD=0.7580;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:20:0:0,0,1	1/1:14,0:14:3.01:40,3,0	./.	0/0:42,0:20:0.89:0,1,2	1/1:17,0:17:3:25,3,0	1/1:12,3:15:0.56:81,1,0	0/1:16,7:24:5.09:80,0,5	1/1:27,0:27:19.54:122,20,0	1/1:13,0:12:3:26,3,0	1/1:11,0:11:11.99:104,12,0	./.	0/0:11,0:11:2.84:0,3,14	0/1:8,2:10:23.01:74,0,23	0/1:11,5:18:26.50:39,0,27	./.	./.	1/1:20,0:17:2.74:12,3,0	1/1:20,0:17:24.46:209,24,0	1/1:18,0:18:3.01:31,3,0	0/1:22,0:21:0:0,0,0	./.	0/1:20,0:20:0:0,0,0	0/0:15,0:19:0.35:0,0,2	0/0:14,0:21:5.68:0,6,28	./.	1/1:10,0:9:10.25:94,10,0	1/1:12,0:12:2.98:21,3,0	1/1:11,0:10:0.47:1,0,0
chr10	38987245	.	G	GAGAGAC	36863.66	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-7.866;DP=612;FS=3.046;HRun=0;HaplotypeScore=113.9576;InbreedingCoeff=0.9843;MQ=76.94;MQ0=0;MQRankSum=-10.108;QD=65.71;ReadPosRankSum=4.334;VQSLOD=5.1646;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,30:36:75.26:2514,75,0	1/1:2,11:13:24.08:824,24,0	0/0:23,0:23:46.70:0,47,935	0/0:27,0:28:48.52:0,49,1226	1/1:0,18:20:36.12:1241,36,0	1/1:2,12:15:27.09:932,27,0	1/1:2,19:24:39.13:1346,39,0	1/1:17,16:35:87.27:2624,87,0	1/1:4,19:24:57.20:1928,57,0	1/1:6,18:27:69.24:2245,69,0	1/1:0,12:12:27.09:901,27,0	1/1:4,23:28:57.20:1951,57,0	1/1:3,21:25:41.95:1444,42,0	1/1:3,14:17:35.99:1233,36,0	1/1:4,17:23:48.16:1644,48,0	1/1:2,18:22:45.15:1550,45,0	1/1:3,15:20:39.13:1339,39,0	1/1:3,5:9:15.05:452,15,0	1/1:3,27:30:87.28:2897,87,0	1/1:5,12:17:33.11:1126,33,0	1/1:8,13:23:27.09:820,27,0	1/1:4,15:20:21.07:716,21,0	1/1:6,15:21:36.12:1212,36,0	1/1:6,20:29:30.08:1010,30,0	1/1:1,13:14:33.11:1125,33,0	1/1:3,21:25:63.18:1958,63,0	1/1:1,17:21:32.68:1111,33,0	1/1:2,8:11:21.07:719,21,0
chr10	38987827	.	G	GCC	6894.94	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-0.482;DP=391;FS=4.455;HRun=7;HaplotypeScore=83.0759;InbreedingCoeff=0.7231;MQ=83.43;MQ0=0;MQRankSum=-6.471;QD=18.84;ReadPosRankSum=3.790;VQSLOD=2.7053;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,0:26:39.93:141,40,0	1/1:0,2:2:5.98:69,6,0	0/0:11,0:11:22.60:0,23,249	0/0:14,0:14:39.11:0,39,450	1/1:3,4:8:11.20:194,11,0	1/1:1,0:5:7.49:26,7,0	1/1:4,0:34:72.36:255,72,0	1/1:4,7:12:24.04:345,24,0	1/1:2,8:10:18.02:266,18,0	1/1:3,0:12:22.46:79,22,0	1/1:0,0:5:9.98:35,10,0	1/1:2,5:9:17.54:235,18,0	1/1:0,0:9:22.46:79,22,0	1/1:2,0:14:22:76,22,0	1/1:0,8:8:24.08:394,24,0	1/1:0,5:5:12.04:197,12,0	1/1:4,22:26:63.22:1034,63,0	1/1:5,0:30:52.19:184,52,0	1/1:5,6:11:17.99:264,18,0	1/1:0,5:5:12.04:197,12,0	1/1:15,43:62:86.85:1378,87,0	1/1:0,2:2:6.02:98,6,0	1/1:2,0:7:12.48:44,12,0	1/1:3,0:31:64.88:229,65,0	1/1:2,1:3:0.47:1,0,0	1/1:0,11:11:30.02:389,30,0	1/1:2,14:16:36.59:588,37,0	1/1:1,2:3:6.02:98,6,0
chr10	38987930	.	CT	C	4841.56	PASS	AB=0.538;AC=33;AF=0.611;AN=54;BaseQRankSum=9.244;DP=260;FS=1.033;HRun=1;HaplotypeScore=26.2058;InbreedingCoeff=0.7111;MQ=64.65;MQ0=0;MQRankSum=-0.897;QD=33.62;ReadPosRankSum=1.865;VQSLOD=4.3381;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:54.18:0,54,862	1/1:0,6:6:12.04:167,12,0	0/0:3,0:3:3.48:0,3,49	./.	1/1:0,3:3:3.01:42,3,0	0/0:3,0:3:9.03:0,9,144	0/0:37,0:37:99:0,102,1553	1/1:0,10:10:27.08:360,27,0	1/1:0,3:3:6.02:84,6,0	0/0:6,0:6:18.06:0,18,287	0/0:4,0:4:12.04:0,12,189	1/1:0,3:3:9.03:125,9,0	0/0:7,0:7:21.06:0,21,310	0/0:9,0:9:27.06:0,27,384	1/1:0,3:3:6.02:83,6,0	1/1:0,1:1:3.01:42,3,0	1/1:0,28:28:75.25:1046,75,0	0/0:23,0:23:66.20:0,66,1020	1/1:0,9:9:27.06:352,27,0	1/1:0,4:4:9.03:125,9,0	1/1:0,43:43:99:1368,99,0	1/1:0,2:2:3:42,3,0	1/1:0,4:4:6.02:83,6,0	1/1:1,13:14:39.13:544,39,0	0/0:6,0:6:18.06:0,18,284	0/1:1,6:7:26.73:212,0,27	1/1:0,2:2:6.02:83,6,0	1/1:0,2:2:6.02:84,6,0
chr10	38989412	.	G	GGT	2063.59	PASS	AB=0.932;AC=29;AF=0.604;AN=48;BaseQRankSum=-0.660;DP=580;FS=16.323;HRun=0;HaplotypeScore=94.5468;InbreedingCoeff=-0.2705;MQ=66.04;MQ0=14;MQRankSum=-0.938;QD=4.57;ReadPosRankSum=1.282;VQSLOD=1.4830;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:25:73.72:100,0,74	0/1:8,0:8:48.77:74,0,49	./.	./.	0/0:17,0:17:2.94:0,3,32	./.	1/1:24,7:31:9.03:132,9,0	0/1:22,0:22:0:0,0,0	1/1:21,1:21:5.85:67,6,0	0/1:14,0:17:30.80:59,0,31	1/1:4,2:6:3.01:44,3,0	1/1:19,0:18:21.01:208,21,0	0/0:15,0:17:8.58:0,9,44	0/0:14,0:12:2.84:0,3,14	0/1:15,9:23:20.98:157,0,21	1/1:14,6:19:4.50:86,5,0	0/1:30,4:33:99:165,0,115	1/1:20,3:25:7.26:289,7,0	0/1:20,0:18:20.86:21,0,26	0/1:10,7:17:70.63:114,0,71	0/1:33,0:33:7.93:183,0,8	0/1:17,0:17:19.90:81,0,20	1/1:11,0:11:3:25,3,0	1/1:19,0:35:0.85:91,1,0	0/1:22,1:23:18.21:113,0,18	0/1:18,0:16:52.45:94,0,52	0/1:22,0:21:16.88:101,0,17	./.
chr10	38990666	.	A	AGTAT	1152.13	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-6.433;DP=901;FS=1.977;HRun=0;HaplotypeScore=178.9803;InbreedingCoeff=0.9439;MQ=68.74;MQ0=0;MQRankSum=-2.413;QD=32.92;ReadPosRankSum=0.815;VQSLOD=3.8238;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:60,0:61:84.46:0,84,1722	0/0:10,0:10:27.09:0,27,441	0/0:37,0:35:35.69:0,36,501	0/0:19,0:19:35.33:0,35,545	0/0:36,0:36:90.28:0,90,1426	0/0:20,0:20:36.12:0,36,592	0/0:37,0:37:81.26:0,81,1297	0/0:37,0:37:69.22:0,69,1087	0/0:42,0:42:99:0,105,1723	0/0:52,0:52:99:0,120,1969	0/0:23,0:23:48.15:0,48,766	0/0:34,0:35:90.30:0,90,1455	0/0:25,0:25:66.23:0,66,1082	0/0:36,0:36:87.28:0,87,1405	0/0:34,0:34:78.27:0,78,1275	0/0:29,0:29:51.16:0,51,814	0/0:42,0:42:99:0,99,1600	0/0:30,0:30:72.25:0,72,1179	0/0:28,0:28:39.10:0,39,573	0/0:25,0:25:48.16:0,48,789	0/0:37,0:37:81.28:0,81,1323	0/0:26,0:26:51.16:0,51,805	0/0:18,0:18:48.16:0,48,789	0/0:38,0:38:72.20:0,72,1140	1/1:14,19:35:51.17:1247,51,0	0/0:40,0:40:96.33:0,96,1575	0/0:40,0:39:72.23:0,72,1149	0/0:8,0:7:9.03:0,9,148
chr10	38991517	.	TTTCC	T	12730.84	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=0.946;DP=487;FS=19.812;HRun=0;HaplotypeScore=101.0019;InbreedingCoeff=0.8161;MQ=62.89;MQ0=1;MQRankSum=-2.497;QD=28.61;ReadPosRankSum=5.381;VQSLOD=3.2273;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:19:39.13:648,39,0	1/1:5,5:10:3.01:50,3,0	0/0:23,0:17:36.09:0,36,738	0/0:19,0:15:21.06:0,21,337	1/1:5,3:8:15.05:232,15,0	1/1:13,0:13:18.05:301,18,0	1/1:31,0:31:54.14:865,54,0	1/1:11,11:22:33.09:489,33,0	1/1:6,11:17:33.11:551,33,0	1/1:20,0:20:42.14:703,42,0	1/1:14,0:14:27.09:453,27,0	1/1:5,12:17:33.11:554,33,0	1/1:12,0:12:30.10:492,30,0	1/1:21,0:21:39.13:651,39,0	1/1:5,14:19:27.09:449,27,0	1/1:6,13:19:51.17:850,51,0	1/1:6,11:17:24.08:403,24,0	1/1:10,0:10:15.05:251,15,0	1/1:7,2:8:6.02:81,6,0	1/1:6,3:9:18.06:285,18,0	1/1:7,32:39:69.19:1128,69,0	1/1:9,1:10:9.03:144,9,0	1/1:4,8:11:13.31:248,13,0	1/1:9,13:22:24.08:401,24,0	1/1:9,11:20:33.10:513,33,0	1/1:7,17:24:45.15:750,45,0	1/1:9,12:21:54.18:876,54,0	1/1:4,6:10:26.99:364,27,0
chr10	38991534	.	TTC	T	3409.79	PASS	AB=0.883;AC=31;AF=0.554;AN=56;BaseQRankSum=5.107;DP=444;FS=31.735;HRun=0;HaplotypeScore=116.3064;InbreedingCoeff=-0.5440;MQ=51.53;MQ0=4;MQRankSum=-0.825;QD=8.52;ReadPosRankSum=11.217;VQSLOD=1.0597;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:5,13:18:30.67:235,0,31	1/1:5,0:5:2.60:10,3,0	0/0:25,0:13:36.09:0,36,623	0/0:19,0:10:26.92:0,27,383	0/1:7,0:7:56.59:57,0,64	0/1:3,6:9:33.23:127,0,33	0/1:8,18:26:33.89:296,0,34	0/1:19,0:19:99:130,0,277	0/1:16,0:16:78.04:78,0,82	0/1:6,12:18:40.34:275,0,40	0/1:4,12:16:25.03:154,0,25	0/1:13,0:13:8.24:83,0,8	0/1:6,8:14:49.26:171,0,49	1/1:6,12:18:4.79:265,5,0	0/1:15,0:15:13.92:63,0,14	0/1:19,0:19:28.50:180,0,28	1/1:12,0:12:20.85:84,21,0	1/1:1,5:6:14.95:115,15,0	0/1:13,0:9:54.05:54,0,251	0/1:8,0:8:43.97:94,0,44	0/1:37,0:37:89.59:157,0,90	0/1:7,0:7:46.78:47,0,82	0/1:14,0:13:31.26:31,0,62	0/1:18,0:18:61.30:61,0,82	0/1:21,0:21:75.66:134,0,76	0/1:20,0:20:99:162,0,107	0/1:20,1:21:62.49:220,0,62	1/1:10,0:10:24.59:125,25,0
chr10	38991576	.	T	TTCCC	9059.80	PASS	AB=0.972;AC=48;AF=0.889;AN=54;BaseQRankSum=-3.786;DP=395;FS=3.680;HRun=0;HaplotypeScore=98.5722;InbreedingCoeff=0.1553;MQ=53.72;MQ0=7;MQRankSum=2.980;QD=26.26;ReadPosRankSum=-0.091;VQSLOD=4.3309;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:23:9.26:481,9,0	1/1:2,0:2:3.01:73,3,0	./.	0/0:31,0:15:12.01:0,12,168	1/1:3,5:8:17.99:327,18,0	0/1:6,0:6:30.91:148,0,31	1/1:29,0:29:9.18:754,9,0	1/1:18,1:19:17.99:204,18,0	1/1:5,7:12:27.08:575,27,0	1/1:16,0:16:22.35:394,22,0	0/1:9,0:9:19.94:147,0,20	1/1:5,0:5:2.94:18,3,0	1/1:13,0:13:5.09:343,5,0	1/1:16,0:16:12.04:216,12,0	1/1:7,6:13:33.10:661,33,0	1/1:6,12:18:23.94:585,24,0	1/1:7,1:8:12.02:206,12,0	0/1:8,0:8:8.95:144,0,9	1/1:5,5:9:15.02:315,15,0	1/1:3,6:11:21.02:381,21,0	1/1:19,11:29:37.10:946,37,0	1/1:5,4:8:17.99:345,18,0	1/1:6,0:6:6.02:85,6,0	0/1:14,0:16:3.41:122,0,3	1/1:15,0:15:21.07:350,21,0	1/1:11,4:16:24.07:495,24,0	1/1:5,7:14:26.96:505,27,0	1/1:5,7:12:12.01:240,12,0
chr10	38991596	.	C	CTCCT	7869.44	PASS	AB=1.000;AC=36;AF=0.643;AN=56;BaseQRankSum=-1.753;DP=424;FS=19.251;HRun=0;HaplotypeScore=81.3550;InbreedingCoeff=-0.1360;MQ=56.93;MQ0=7;MQRankSum=-3.963;QD=20.71;ReadPosRankSum=11.608;VQSLOD=2.0674;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,27:31:29.93:694,30,0	0/1:5,0:5:36.84:37,0,46	0/0:17,0:10:24.06:0,24,268	0/0:21,0:12:21.06:0,21,286	0/1:11,0:11:91.71:174,0,92	1/1:2,4:7:9.03:227,9,0	1/1:2,24:27:42.14:1057,42,0	0/1:19,0:19:33.90:34,0,120	0/1:15,0:15:99:306,0,123	1/1:3,14:17:47.93:865,48,0	1/1:3,4:7:11.97:240,12,0	0/0:5,0:5:9.47:0,9,79	1/1:2,15:18:24.05:551,24,0	1/1:2,14:17:12.04:303,12,0	0/1:16,0:16:84.83:332,0,85	0/1:21,0:21:99:339,0,143	0/1:14,0:14:71.34:71,0,151	1/1:1,8:10:9.03:227,9,0	0/1:14,0:12:99:155,0,123	0/1:12,0:12:61.88:207,0,62	0/1:30,0:29:57.08:564,0,57	0/1:12,0:11:90.63:170,0,91	1/1:2,0:2:5.94:44,6,0	0/1:13,0:13:52.18:52,0,71	1/1:2,16:20:21.07:528,21,0	0/1:16,0:16:99:246,0,136	0/1:17,0:17:78.90:291,0,79	1/1:9,0:9:9.03:157,9,0
chr10	38995240	.	TGG	T	1602.95	PASS	AB=0.685;AC=8;AF=0.143;AN=56;BaseQRankSum=10.126;DP=661;FS=19.082;HRun=2;HaplotypeScore=82.2262;InbreedingCoeff=-0.1667;MQ=68.31;MQ0=0;MQRankSum=-10.544;QD=10.62;ReadPosRankSum=0.713;VQSLOD=-0.6978;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:10,10:20:99:205,0,447	0/0:10,0:10:30.10:0,30,610	0/0:28,0:28:84.29:0,84,1638	0/0:22,0:21:63.22:0,63,1228	0/0:26,0:26:78.27:0,78,1585	0/1:8,10:18:99:256,0,252	0/1:12,11:22:99:140,0,498	0/0:24,0:24:69.24:0,69,1393	0/0:24,0:24:72.25:0,72,1444	0/1:15,12:27:99:508,0,774	0/1:14,4:18:55.57:56,0,621	0/0:30,0:30:87.30:0,87,1747	0/1:5,8:13:99:168,0,277	0/1:9,8:17:99:156,0,507	0/0:33,0:33:99:0,99,1967	0/0:23,0:23:69.24:0,69,1390	0/0:43,0:42:99:0,129,2568	0/1:8,7:15:99:251,0,363	0/0:26,0:25:75.24:0,75,1477	0/0:17,0:17:51.18:0,51,1036	0/0:47,0:47:99:0,135,2706	0/0:24,0:24:72.25:0,72,1463	0/0:15,0:15:45.15:0,45,912	0/0:26,0:26:78.27:0,78,1570	0/0:17,0:17:51.18:0,51,1035	0/0:30,1:31:44.42:0,44,1772	0/0:30,0:29:87.30:0,87,1744	0/0:14,0:14:42.14:0,42,853
chr10	38995909	.	C	CCTCT	14542.99	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-12.516;DP=769;FS=0.645;HRun=0;HaplotypeScore=145.1632;InbreedingCoeff=0.9948;MQ=81.51;MQ0=0;MQRankSum=-7.804;QD=58.41;ReadPosRankSum=-0.206;VQSLOD=6.2714;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,37:47:75.72:2035,76,0	0/0:15,0:15:45.15:0,45,895	0/0:21,0:21:57.08:0,57,1053	0/0:23,0:23:66.23:0,66,1263	0/0:18,0:18:48.15:0,48,879	1/1:5,25:32:69.24:1866,69,0	1/1:4,25:31:81.28:2232,81,0	0/0:37,0:37:99:0,111,2117	0/0:33,0:33:96.33:0,96,1893	1/1:4,17:26:69.19:1631,69,0	1/1:3,12:15:12.04:304,12,0	0/0:36,0:36:99:0,102,1982	1/1:5,25:33:84.29:2229,84,0	1/1:5,31:37:84.29:2345,84,0	0/0:30,0:30:87.30:0,87,1737	0/0:27,0:27:75.26:0,75,1476	0/0:19,0:19:57.12:0,57,1026	1/1:0,27:28:69.24:1902,69,0	0/0:15,0:15:45.15:0,45,898	0/0:22,0:22:57.20:0,57,1117	0/0:77,0:77:99:0,223,4299	0/0:21,0:21:60.20:0,60,1162	0/0:22,0:22:63.18:0,63,1183	0/0:24,0:24:72.20:0,72,1396	0/0:24,0:24:66.22:0,66,1284	0/0:25,0:25:72.24:0,72,1404	0/0:20,0:20:54.19:0,54,1079	0/0:11,0:11:33.08:0,33,619
chr10	38996867	.	GCT	G	2131.59	PASS	AB=0.889;AC=30;AF=0.556;AN=54;BaseQRankSum=2.551;DP=578;FS=0.000;HRun=0;HaplotypeScore=151.2205;InbreedingCoeff=-0.0740;MQ=67.35;MQ0=16;MQRankSum=-1.541;QD=5.79;ReadPosRankSum=1.049;VQSLOD=3.1175;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:9,7:16:2.99:0,3,24	1/1:4,0:9:5.17:46,5,0	0/0:52,0:21:1.44:0,1,5	0/0:57,0:26:0.81:0,1,63	0/1:6,0:7:5.42:5,0,16	1/1:4,9:13:17.98:185,18,0	1/1:13,9:25:22.62:293,23,0	0/1:16,0:18:24.54:25,0,47	0/1:21,0:22:17.69:18,0,41	1/1:12,6:19:8.40:242,8,0	1/1:7,2:9:4.82:40,5,0	0/0:23,0:22:1.55:0,2,4	1/1:10,8:18:29.79:301,30,0	1/1:15,7:24:38.03:365,38,0	0/1:22,0:29:99:109,0,122	0/1:26,0:31:39.47:98,0,39	0/1:19,0:21:7.85:48,0,8	1/1:16,6:22:16.97:226,17,0	1/1:13,0:11:6.79:53,7,0	0/0:15,0:17:1.97:0,2,6	0/0:25,0:31:0.03:0,0,51	0/1:16,0:16:18.73:19,0,30	0/1:7,0:7:0.01:0,0,0	./.	0/1:17,0:18:25.93:79,0,26	0/1:14,1:18:53.66:54,0,67	0/1:10,0:13:11.11:62,0,11	0/1:7,0:7:12.62:13,0,58
chr10	38996889	.	T	TCG	2218.56	PASS	AB=0.897;AC=20;AF=0.357;AN=56;BaseQRankSum=-4.465;DP=623;FS=6.386;HRun=0;HaplotypeScore=187.0459;InbreedingCoeff=-0.4626;MQ=53.74;MQ0=24;MQRankSum=-1.034;QD=4.94;ReadPosRankSum=3.017;VQSLOD=2.6876;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:24:38.19:0,38,270	0/1:12,1:13:88.58:115,0,89	0/0:52,0:11:9.25:0,9,31	0/1:88,0:23:21.20:21,0,106	0/1:10,0:11:34.51:35,0,48	0/1:14,1:15:5.72:6,0,97	0/1:23,1:24:85.94:86,0,120	0/1:18,1:19:78.58:203,0,79	0/1:17,2:18:64.04:128,0,64	0/0:18,0:18:1.99:0,2,216	0/1:10,0:9:17.94:18,0,71	0/0:17,0:16:29.77:0,30,212	0/0:17,0:17:40.38:0,40,256	0/1:23,1:25:81.26:81,0,193	0/1:24,9:30:99:176,0,169	0/1:18,10:28:99:357,0,165	0/1:17,4:21:99:163,0,103	0/0:18,0:18:24.13:0,24,146	0/1:15,2:13:54.59:150,0,55	1/1:16,3:17:5.69:109,6,0	0/1:32,5:37:64.60:65,0,119	0/1:12,4:15:66.68:197,0,67	0/0:4,0:4:3:0,3,25	0/0:6,0:6:5.93:0,6,40	0/0:17,0:17:12.77:0,13,285	0/1:18,5:22:99:287,0,162	0/1:20,1:21:99:129,0,142	0/1:9,1:8:48.62:49,0,74
chr10	38996893	.	TCG	T	3987.22	PASS	AB=0.995;AC=38;AF=0.731;AN=52;BaseQRankSum=0.914;DP=595;FS=2.695;HRun=0;HaplotypeScore=192.7952;InbreedingCoeff=-0.1067;MQ=56.21;MQ0=20;MQRankSum=-0.939;QD=6.91;ReadPosRankSum=1.861;VQSLOD=3.3586;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:23:16.52:255,17,0	1/1:13,0:13:15.36:177,15,0	0/1:57,0:14:1.69:2,0,6	0/1:94,0:27:40.12:40,0,80	1/1:11,0:11:12.82:96,13,0	1/1:15,0:15:24.94:140,25,0	1/1:23,0:23:27.64:205,28,0	0/1:18,0:18:7.75:219,0,8	0/1:19,0:18:31.44:94,0,31	1/1:16,0:16:2.92:163,3,0	1/1:10,0:10:4.58:74,5,0	0/1:2,0:2:0:0,0,0	1/1:15,0:15:23.90:218,24,0	1/1:23,0:23:38.47:287,38,0	0/1:33,0:30:99:173,0,101	0/1:28,0:28:44.47:194,0,44	1/1:21,0:21:31.13:197,31,0	1/1:18,0:18:21.74:143,22,0	0/1:14,0:13:8.55:102,0,9	0/0:18,0:17:5.06:0,5,35	0/1:35,0:35:44.23:150,0,44	0/1:17,1:17:20.23:116,0,20	./.	./.	1/1:11,7:18:22.96:380,23,0	0/1:22,0:21:99:225,0,118	1/1:22,0:22:32.44:307,32,0	0/1:7,0:6:31.13:31,0,43
chr10	38996899	.	TCG	T	1177.67	PASS	AB=0.982;AC=13;AF=0.260;AN=50;BaseQRankSum=5.719;DP=610;FS=3.589;HRun=0;HaplotypeScore=226.8495;InbreedingCoeff=0.4205;MQ=59.32;MQ0=19;MQRankSum=-3.850;QD=4.71;ReadPosRankSum=2.853;VQSLOD=2.6813;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:24:44.48:331,44,0	0/0:13,0:13:20.89:0,21,128	0/0:58,0:17:1.29:0,1,119	0/1:102,0:31:5.64:6,0,372	0/0:12,0:12:7.97:0,8,70	1/1:15,2:17:30.12:188,30,0	0/1:21,2:23:3.07:188,0,3	0/0:18,0:18:36.86:0,37,369	0/0:21,0:20:9.87:0,10,162	0/1:16,0:16:99:128,0,140	1/1:10,0:10:14.72:108,15,0	./.	0/1:15,0:15:18.41:107,0,18	1/1:20,2:22:6.90:231,7,0	0/0:32,0:29:7.32:0,7,215	0/0:30,0:30:37.31:0,37,334	0/0:21,0:21:20.91:0,21,222	0/1:18,0:18:15.51:51,0,16	0/0:14,0:14:33.08:0,33,263	0/0:20,0:20:2.68:0,3,26	0/0:35,0:35:23.47:0,23,240	0/0:18,0:17:26.75:0,27,227	./.	./.	0/0:20,0:20:14.60:0,15,211	0/0:22,0:21:26.36:0,26,302	0/0:20,0:20:36.46:0,36,269	0/0:6,0:5:11.70:0,12,81
chr10	38996903	.	TCTCGCTCTCGCG	T	10492.11	PASS	AB=0.998;AC=44;AF=0.880;AN=50;BaseQRankSum=-0.703;DP=625;FS=8.234;HRun=0;HaplotypeScore=281.0380;InbreedingCoeff=0.2663;MQ=64.11;MQ0=19;MQRankSum=0.502;QD=18.60;ReadPosRankSum=3.955;VQSLOD=2.3849;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:22,3:24:44.63:910,45,0	1/1:15,0:15:30.10:463,30,0	0/0:59,0:19:23.65:0,24,227	0/1:106,0:36:4.35:4,0,568	1/1:14,0:14:13.13:175,13,0	1/1:17,2:19:39.10:726,39,0	1/1:23,0:23:39.95:753,40,0	0/1:20,0:20:3.79:195,0,4	1/1:18,0:18:21.37:207,21,0	1/1:16,1:17:0.71:694,1,0	1/1:8,2:10:18.05:339,18,0	./.	1/1:12,3:15:36.09:764,36,0	1/1:18,4:22:42.14:1032,42,0	1/1:30,0:27:48.37:710,48,0	1/1:31,0:31:58.68:665,59,0	1/1:22,0:22:2.15:329,2,0	1/1:4,14:18:24.01:574,24,0	0/1:12,0:12:8.21:159,0,8	1/1:21,0:21:11.85:96,12,0	1/1:36,0:36:19.96:170,20,0	1/1:18,0:17:16.08:186,16,0	./.	./.	0/1:23,0:23:99:192,0,353	1/1:23,0:22:50.70:555,51,0	1/1:18,0:18:33.71:441,34,0	1/1:6,0:5:14.18:153,14,0
chr10	38996905	.	TCG	T	1506.77	PASS	AB=0.877;AC=20;AF=0.400;AN=50;BaseQRankSum=3.423;DP=625;FS=3.505;HRun=0;HaplotypeScore=236.6027;InbreedingCoeff=-0.4932;MQ=62.72;MQ0=17;MQRankSum=-5.043;QD=2.93;ReadPosRankSum=-1.241;VQSLOD=2.4827;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:21,3:24:33.88:34,0,189	0/1:15,0:15:44.94:45,0,275	0/1:61,0:20:11.66:12,0,208	0/1:99,3:35:22.32:22,0,511	0/0:13,1:14:17.06:0,17,247	0/1:13,6:19:99:108,0,159	0/1:12,11:23:70.80:313,0,71	0/0:21,0:21:45.39:0,45,559	0/1:16,2:18:16.52:17,0,297	0/1:13,3:16:95.47:155,0,95	0/1:9,1:10:17.89:18,0,123	./.	0/1:12,4:16:93.48:151,0,93	0/1:18,4:22:67.89:178,0,68	0/1:25,3:27:99:195,0,289	0/1:26,6:32:83.18:83,0,533	0/0:23,0:23:19.69:0,20,408	1/1:16,2:18:3.07:156,3,0	0/0:12,0:12:29.22:0,29,305	0/1:18,3:21:30.16:30,0,31	0/1:35,1:36:3.10:3,0,358	0/1:19,0:18:2.29:2,0,274	./.	./.	0/0:22,0:22:53.04:0,53,635	0/1:22,3:24:98.44:98,0,427	0/0:18,0:18:43.49:0,43,454	0/1:4,2:5:33.79:34,0,87
chr10	38996909	.	TCTCGCG	T	11288.36	PASS	AB=0.982;AC=47;AF=0.940;AN=50;BaseQRankSum=0.521;DP=641;FS=23.826;HRun=0;HaplotypeScore=243.3892;InbreedingCoeff=0.5849;MQ=68.64;MQ0=18;MQRankSum=0.013;QD=19.70;ReadPosRankSum=3.846;VQSLOD=2.9597;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:25:48.08:639,48,0	1/1:13,4:17:47.55:657,48,0	0/0:66,0:28:13.16:0,13,211	0/1:109,0:43:40.99:41,0,436	1/1:14,1:15:21.72:222,22,0	1/1:19,0:19:37.59:389,38,0	1/1:26,0:26:44.26:514,44,0	1/1:9,11:20:57.13:724,57,0	1/1:17,2:19:32.85:336,33,0	1/1:14,0:14:18.26:403,18,0	1/1:11,0:11:20.83:248,21,0	./.	1/1:17,0:17:38.58:462,39,0	1/1:19,0:19:41.92:562,42,0	1/1:20,9:28:53.97:752,54,0	1/1:26,5:31:72.03:986,72,0	1/1:22,2:24:33.08:511,33,0	1/1:18,0:18:17.94:253,18,0	1/1:11,1:12:29.76:395,30,0	1/1:6,15:21:11.89:109,12,0	1/1:30,4:34:34.19:432,34,0	1/1:18,1:18:30.82:392,31,0	./.	./.	1/1:22,0:22:36.69:437,37,0	1/1:21,3:23:66.07:868,66,0	1/1:14,4:18:47.78:774,48,0	1/1:5,1:5:12.01:183,12,0
chr10	38996968	.	AGTGTGTGTGT	A	2738.15	PASS	AB=0.832;AC=31;AF=0.574;AN=54;BaseQRankSum=3.408;DP=582;FS=31.264;HRun=0;HaplotypeScore=249.9232;InbreedingCoeff=0.1479;MQ=58.66;MQ0=27;MQRankSum=-2.661;QD=7.42;ReadPosRankSum=-2.407;VQSLOD=1.1920;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/1:9,0:11:6.02:16,0,6	0/0:54,0:20:3.01:0,3,68	0/0:48,0:29:3.01:0,3,32	0/1:13,0:17:11.05:11,0,40	1/1:12,6:18:14.98:344,15,0	0/1:16,6:21:0:0,0,0	0/0:22,0:21:6.02:0,6,69	0/1:14,1:19:29.60:30,0,43	1/1:18,7:26:15.97:318,16,0	1/1:7,1:10:2.92:54,3,0	1/1:14,8:21:23.82:710,24,0	1/1:11,4:16:6.02:159,6,0	1/1:13,6:22:12.98:281,13,0	0/0:11,0:14:8.98:0,9,76	1/1:18,0:27:12.60:119,13,0	0/1:17,0:19:15.49:35,0,15	0/0:15,0:15:1.55:0,2,4	1/1:15,1:13:2.15:87,2,0	0/1:7,0:8:0:0,0,0	0/0:28,0:28:3.71:0,4,44	0/1:19,0:23:31.73:32,0,51	0/0:9,2:11:0:0,0,1	1/1:12,4:15:2.61:89,3,0	1/1:16,1:19:14.79:317,15,0	0/1:28,1:29:99:129,0,142	0/1:11,0:17:26.78:151,0,27	1/1:4,0:6:1.55:4,2,0
chr10	38997923	.	A	AGT	3574.57	PASS	AB=0.682;AC=10;AF=0.179;AN=56;BaseQRankSum=3.910;DP=727;FS=4.304;HRun=0;HaplotypeScore=166.6650;InbreedingCoeff=0.2628;MQ=73.07;MQ0=0;MQRankSum=-4.537;QD=19.01;ReadPosRankSum=2.946;VQSLOD=4.0437;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:90.80:0,91,567	1/1:0,5:5:15.04:171,15,0	0/0:25,0:25:75.23:0,75,1143	0/0:19,0:19:47.34:0,47,766	1/1:4,14:18:21.60:463,22,0	0/0:31,0:31:82.26:0,82,590	0/0:28,0:28:62.85:0,63,396	0/0:33,0:33:66.43:0,66,531	0/1:4,14:18:25.69:425,0,26	0/0:31,0:31:88.15:0,88,636	0/0:17,0:17:44.17:0,44,322	0/0:27,0:27:80.01:0,80,553	0/0:25,1:26:52.57:0,53,513	0/0:31,0:31:68.32:0,68,493	0/1:21,24:45:99:891,0,126	0/1:14,11:25:94.82:466,0,95	0/1:10,23:33:50.18:769,0,50	0/0:31,1:31:38.36:0,38,533	0/1:28,0:28:44.37:44,0,331	0/0:17,0:17:47.41:0,47,317	0/0:40,0:40:99:0,118,794	0/1:5,11:16:63.47:345,0,63	0/0:12,0:12:35.68:0,36,260	0/0:33,0:33:47.92:0,48,557	0/0:19,0:19:47.52:0,48,302	0/0:34,0:34:73.60:0,74,554	0/0:29,0:29:83.03:0,83,587	0/0:7,0:7:20.80:0,21,145
chr10	38997924	.	A	ATAAG	21596.16	PASS	AB=0.971;AC=33;AF=0.589;AN=56;BaseQRankSum=-16.262;DP=741;FS=2.853;HRun=0;HaplotypeScore=136.7303;InbreedingCoeff=0.9161;MQ=72.13;MQ0=0;MQRankSum=-1.075;QD=46.15;ReadPosRankSum=1.767;VQSLOD=5.1064;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,43:50:84.18:2057,84,0	1/1:1,0:6:18.06:427,18,0	0/0:24,0:24:36.12:0,36,571	0/0:19,0:19:21.39:0,21,382	1/1:4,0:18:51.09:1132,51,0	1/1:6,25:31:69.24:1688,69,0	1/1:3,25:28:60.21:1466,60,0	0/0:33,0:33:46.83:0,47,469	1/1:4,0:18:42.14:1010,42,0	1/1:7,26:34:87.22:1908,87,0	1/1:4,13:17:36.04:825,36,0	0/0:29,0:29:63.15:0,63,733	1/1:7,18:27:54.19:1312,54,0	1/1:5,26:31:10.04:1360,10,0	1/1:22,0:46:99:2232,102,0	1/1:15,0:26:48.16:1103,48,0	1/1:12,0:35:78.27:1824,78,0	1/1:9,21:31:54.19:1334,54,0	0/0:28,0:28:32.02:0,32,381	0/0:18,0:18:41.59:0,42,494	0/0:40,0:40:65.76:0,66,995	1/1:6,0:17:39.08:856,39,0	0/0:12,0:12:21.53:0,22,255	0/0:34,0:34:57.70:0,58,892	1/1:2,16:18:42.14:1020,42,0	0/1:33,1:34:43.01:43,0,707	0/0:29,0:29:27.11:0,27,776	0/0:7,0:7:18:0,18,178
chr10	38998892	.	GA	G	4714.31	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=1.884;DP=403;FS=2.965;HRun=3;HaplotypeScore=96.5461;InbreedingCoeff=0.5896;MQ=89.46;MQ0=4;MQRankSum=-6.293;QD=12.95;ReadPosRankSum=-2.132;VQSLOD=3.0144;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:12,1:13:21.82:150,22,0	1/1:0,0:3:0.89:2,1,0	0/0:22,0:22:51.11:0,51,843	0/0:17,0:17:44.45:0,44,563	1/1:0,6:7:5.57:73,6,0	1/1:12,0:13:6.89:62,7,0	1/1:25,0:27:30.22:285,30,0	1/1:1,0:8:8.53:40,9,0	1/1:11,3:14:1.76:208,2,0	1/1:6,0:6:4.68:24,5,0	1/1:4,1:6:8.32:67,8,0	1/1:2,12:14:19.61:227,20,0	1/1:11,0:13:5.56:130,6,0	1/1:14,0:14:28.67:217,29,0	1/1:0,3:16:11.56:103,12,0	1/1:3,14:16:43.77:465,44,0	1/1:15,11:27:25.34:490,25,0	1/1:13,1:14:14.18:157,14,0	1/1:6,2:8:18.80:162,19,0	1/1:0,5:5:11.96:120,12,0	1/1:3,41:46:35.98:409,36,0	1/1:7,6:14:19.46:241,19,0	1/1:0,2:11:8.82:84,9,0	1/1:1,17:20:32.64:378,33,0	1/1:1,1:14:13:61,13,0	1/1:11,6:18:36.28:299,36,0	1/1:1,10:11:20.96:225,21,0	1/1:0,2:2:3.01:36,3,0
chr10	39000387	.	TAA	T	5364.74	PASS	AB=0.707;AC=35;AF=0.625;AN=56;BaseQRankSum=4.891;DP=603;FS=9.034;HRun=15;HaplotypeScore=105.3790;InbreedingCoeff=0.8032;MQ=72.80;MQ0=5;MQRankSum=1.024;QD=14.34;ReadPosRankSum=4.701;VQSLOD=3.4424;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:48:99:0,119,1371	1/1:0,5:5:8.95:79,9,0	0/0:28,0:18:18.44:0,18,173	0/1:17,0:16:19.73:20,0,50	1/1:6,20:26:38.58:342,39,0	0/0:21,0:24:61.41:0,61,675	0/0:17,0:20:36.35:0,36,535	1/1:8,10:20:31.83:256,32,0	1/1:10,11:21:20.89:185,21,0	0/0:19,0:21:41.89:0,42,483	0/0:22,0:22:45.13:0,45,586	1/1:6,11:18:26.82:238,27,0	0/0:12,1:14:9.20:0,9,368	0/0:20,0:20:44.06:0,44,483	1/1:4,19:23:47.65:408,48,0	1/1:3,21:24:56.73:487,57,0	1/1:5,21:27:62.65:540,63,0	0/0:23,0:26:68.68:0,69,787	1/1:7,15:22:47.58:401,48,0	1/1:6,9:15:29.90:261,30,0	1/1:5,11:20:46.83:364,47,0	1/1:2,11:13:23.91:211,24,0	1/1:7,12:20:32.56:276,33,0	1/1:2,17:19:38.97:344,39,0	0/1:6,1:15:5.28:5,0,58	0/1:6,12:18:0.77:277,0,1	1/1:10,25:35:59.86:528,60,0	1/1:4,5:10:17.59:142,18,0
chr10	39000553	.	A	ATC	26404.08	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-6.128;DP=643;FS=3.111;HRun=0;HaplotypeScore=79.3791;InbreedingCoeff=0.9822;MQ=78.78;MQ0=3;MQRankSum=-6.850;QD=44.83;ReadPosRankSum=6.220;VQSLOD=6.3520;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,37:39:84.29:1534,84,0	1/1:0,4:4:12.04:220,12,0	0/0:25,0:24:57.19:0,57,801	0/0:28,0:26:57.07:0,57,744	1/1:0,18:18:54.19:989,54,0	1/1:3,19:22:48.16:878,48,0	1/1:2,26:28:63.22:1154,63,0	1/1:1,41:42:99:2088,123,0	1/1:1,16:17:39.13:715,39,0	1/1:1,24:25:72.25:1314,72,0	1/1:1,16:17:42.14:768,42,0	1/1:2,19:21:54.19:986,54,0	1/1:1,16:18:39.13:713,39,0	1/1:0,12:12:30.10:550,30,0	1/1:1,25:25:66.23:1209,66,0	1/1:0,19:19:48.16:880,48,0	1/1:2,24:26:63.22:1154,63,0	1/1:1,29:30:75.26:1374,75,0	1/1:1,22:23:66.69:1180,67,0	1/1:0,20:20:48.16:880,48,0	1/1:0,32:32:72.25:1319,72,0	1/1:0,23:23:51.07:895,51,0	1/1:1,14:15:39.13:714,39,0	1/1:1,14:14:33.11:604,33,0	1/1:1,22:23:60.21:1098,60,0	1/1:0,32:33:99:1600,99,0	1/1:0,29:29:63.22:1154,63,0	1/1:1,11:12:22.01:436,22,0
chr10	39001260	.	AT	A	13180.29	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-4.590;DP=594;FS=12.353;HRun=9;HaplotypeScore=60.9713;InbreedingCoeff=0.9914;MQ=68.58;MQ0=1;MQRankSum=-3.254;QD=23.66;ReadPosRankSum=4.884;VQSLOD=4.7387;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,27:27:78.04:714,78,0	1/1:1,11:12:27.99:295,28,0	0/0:15,0:13:15.92:0,16,170	0/0:20,0:18:30.09:0,30,342	1/1:4,23:27:69.03:631,69,0	1/1:1,15:16:45.02:412,45,0	1/1:2,20:22:48.02:439,48,0	1/1:7,31:38:93.01:841,93,0	1/1:1,19:20:48.03:439,48,0	1/1:3,23:26:68.99:620,69,0	1/1:1,12:13:36.02:329,36,0	1/1:4,18:22:51.03:467,51,0	1/1:1,18:19:51.03:467,51,0	1/1:0,15:15:39.02:357,39,0	1/1:2,27:29:77.64:696,78,0	1/1:0,12:12:30.02:275,30,0	1/1:0,32:32:93.05:851,93,0	1/1:3,17:20:26.24:390,26,0	1/1:1,17:18:51.01:462,51,0	1/1:4,23:27:69.03:631,69,0	1/1:3,15:18:42.02:384,42,0	1/1:3,20:23:53.97:486,54,0	1/1:0,19:19:54.03:494,54,0	1/1:0,20:20:57.03:522,57,0	1/1:1,20:21:57.03:522,57,0	1/1:1,26:27:78.04:714,78,0	1/1:4,17:21:48.02:439,48,0	1/1:2,11:13:33.01:302,33,0
chr10	39001430	.	GGT	G	16318.59	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-2.501;DP=691;FS=8.078;HRun=0;HaplotypeScore=118.8376;InbreedingCoeff=0.9351;MQ=68.17;MQ0=6;MQRankSum=-2.285;QD=25.94;ReadPosRankSum=6.345;VQSLOD=5.7201;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,37:43:87.27:1070,87,0	1/1:2,3:5:5.89:74,6,0	0/0:34,0:28:26.95:0,27,381	0/0:27,0:24:51.17:0,51,756	1/1:3,17:21:45.14:548,45,0	1/1:6,11:17:30.09:369,30,0	1/1:5,13:18:33.10:406,33,0	1/1:7,19:26:57.09:636,57,0	1/1:5,17:22:51.16:627,51,0	1/1:8,21:29:60.03:692,60,0	1/1:4,7:10:15.05:185,15,0	1/1:4,23:27:57.18:701,57,0	1/1:4,10:15:35.94:420,36,0	1/1:2,19:21:45.13:554,45,0	1/1:3,27:31:72.06:863,72,0	1/1:3,21:24:54.17:664,54,0	1/1:8,34:42:81.25:997,81,0	1/1:4,25:30:75.02:883,75,0	1/1:5,13:19:38.93:439,39,0	1/1:2,17:19:51.12:610,51,0	1/1:12,54:66:99:1601,132,0	1/1:1,18:19:51.16:627,51,0	1/1:5,18:24:54:642,54,0	1/1:7,21:28:60.19:737,60,0	1/1:0,13:13:33.10:406,33,0	1/1:3,20:24:63.08:716,63,0	1/1:4,22:26:51.14:628,51,0	1/1:1,6:7:18.06:221,18,0
chr10	39002389	.	AT	A	382.67	PASS	AB=1.000;AC=16;AF=0.308;AN=52;BaseQRankSum=-0.383;DP=171;FS=4.153;HRun=1;HaplotypeScore=29.5850;InbreedingCoeff=0.5158;MQ=88.51;MQ0=3;MQRankSum=0.758;QD=6.71;ReadPosRankSum=-1.860;VQSLOD=0.0821;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:7:20.93:0,21,166	./.	0/0:15,0:11:5.33:0,5,124	0/1:13,0:10:4.76:5,0,152	0/0:2,0:2:5.87:0,6,40	./.	0/0:6,0:6:11.77:0,12,81	1/1:0,9:9:23.92:190,24,0	0/1:5,0:5:0.35:0,0,75	0/0:1,0:1:3.01:0,3,30	0/0:1,0:1:3:0,3,25	0/0:22,0:23:39.91:0,40,232	0/0:4,0:4:11.97:0,12,96	0/0:5,0:5:11.87:0,12,85	0/0:6,0:6:14.37:0,14,115	0/0:3,0:3:6.01:0,6,60	0/0:8,0:8:12:0,12,123	0/0:1,0:1:2.99:0,3,23	1/1:0,4:4:8.99:79,9,0	1/1:2,0:2:6:51,6,0	1/1:8,0:8:14.98:125,15,0	0/0:6,0:6:15.01:0,15,156	0/0:10,0:11:13.36:0,13,132	0/0:15,0:15:31.32:0,31,200	0/1:6,0:6:6.25:6,0,87	1/1:0,3:3:5.59:47,6,0	0/1:5,0:5:0.26:18,0,0	1/1:2,0:2:2.97:20,3,0
chr10	39002390	.	TCCC	T	872.78	PASS	AB=1.000;AC=9;AF=0.196;AN=46;BaseQRankSum=-2.151;DP=180;FS=5.672;HRun=12;HaplotypeScore=33.4116;InbreedingCoeff=0.4993;MQ=82.12;MQ0=3;MQRankSum=-0.495;QD=15.87;ReadPosRankSum=3.186;VQSLOD=0.5275;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:1.83:0,2,4	./.	0/0:14,0:10:8.83:0,9,111	0/0:13,0:9:14.73:0,15,169	0/0:2,0:2:2.99:0,3,24	./.	0/0:6,0:6:3:0,3,25	0/0:9,0:9:0:0,0,0	0/0:7,0:7:6.04:0,6,67	./.	1/1:2,0:2:0.45:1,0,0	1/1:5,18:23:36.10:443,36,0	0/0:4,0:4:2.99:0,3,23	0/0:7,0:7:5.20:0,5,29	0/0:6,0:6:8.96:0,9,100	0/0:3,0:3:3.01:0,3,34	0/0:8,0:8:5.99:0,6,59	./.	0/1:4,0:4:0:0,0,0	0/0:2,0:2:0:0,0,0	./.	0/0:6,0:6:6.01:0,6,61	1/1:3,8:11:30.02:358,30,0	1/1:6,9:15:15:189,15,0	0/0:5,0:6:8.99:0,9,76	0/0:3,0:3:0.47:0,0,1	0/0:5,0:5:1.36:0,1,3	0/0:2,0:2:0:0,0,0
chr10	39002864	.	CT	C	831.70	PASS	AB=0.726;AC=5;AF=0.089;AN=56;BaseQRankSum=9.756;DP=645;FS=21.077;HRun=2;HaplotypeScore=78.9050;InbreedingCoeff=-0.0994;MQ=92.10;MQ0=0;MQRankSum=-8.490;QD=6.87;ReadPosRankSum=-0.858;VQSLOD=-0.6823;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,105,1526	0/0:5,0:5:15.05:0,15,225	0/0:34,0:34:93.24:0,93,1268	0/0:26,0:26:52.94:0,53,831	0/0:20,0:20:60.18:0,60,859	0/0:18,0:18:54.18:0,54,798	0/0:30,0:30:90.29:0,90,1310	0/1:18,8:26:99:264,0,472	0/0:25,0:25:75.24:0,75,1102	0/0:24,0:24:69.20:0,69,976	0/0:23,0:23:60.17:0,60,839	0/0:25,0:25:75.25:0,75,1123	0/0:34,0:34:99:0,102,1526	0/0:29,0:29:87.27:0,87,1280	0/0:19,0:19:57.18:0,57,834	0/0:18,0:18:54.16:0,54,770	0/0:22,0:22:66.21:0,66,969	0/0:23,0:23:69.22:0,69,1012	0/1:14,4:18:93.66:94,0,430	0/1:6,15:21:78.92:79,0,239	0/0:11,6:17:23.97:0,24,270	0/0:29,0:29:78.26:0,78,1168	0/0:15,0:15:42.14:0,42,627	0/0:25,0:25:72.24:0,72,1071	0/0:22,0:22:66.19:0,66,931	0/1:18,8:26:99:226,0,574	0/1:17,13:30:99:287,0,398	0/0:5,0:5:15.05:0,15,224
chr10	39004021	.	C	CTCT	9865.73	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-14.904;DP=716;FS=1.482;HRun=0;HaplotypeScore=101.2537;InbreedingCoeff=0.9990;MQ=73.44;MQ0=0;MQRankSum=-4.379;QD=49.83;ReadPosRankSum=1.503;VQSLOD=6.6726;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,160,2573	0/0:9,0:9:23.75:0,24,354	0/0:10,0:10:30.10:0,30,477	0/0:19,0:19:39.13:0,39,620	0/0:15,0:15:42.14:0,42,675	0/0:13,0:13:36.12:0,36,588	0/0:48,0:48:99:0,123,1984	1/1:4,16:22:54.13:1087,54,0	0/0:36,0:36:99:0,105,1673	0/0:24,0:24:72.25:0,72,1165	0/0:13,0:13:39.12:0,39,609	0/0:31,0:31:84.29:0,84,1372	0/0:25,0:25:63.19:0,63,1003	0/0:36,0:36:99:0,99,1589	0/0:24,0:24:69.20:0,69,1078	0/0:25,0:25:75.26:0,75,1214	0/0:28,0:28:75.23:0,75,1186	0/0:23,0:23:69.24:0,69,1118	1/1:7,20:27:60.20:1290,60,0	1/1:2,16:18:37.20:819,37,0	1/1:5,69:74:99:3772,172,0	0/0:12,0:12:36.11:0,36,564	0/0:14,0:14:42.11:0,42,636	0/0:39,0:39:99:0,117,1907	0/0:21,0:21:63.20:0,63,1001	1/1:1,22:23:66.14:1407,66,0	1/1:4,17:21:45.09:956,45,0	1/1:1,12:13:24.08:536,24,0
chr10	39005318	.	A	ACACT	5691.53	PASS	AB=0.758;AC=8;AF=0.154;AN=52;BaseQRankSum=-12.461;DP=896;FS=27.317;HRun=0;HaplotypeScore=166.2916;InbreedingCoeff=-0.2052;MQ=44.23;MQ0=93;MQRankSum=-0.256;QD=15.85;ReadPosRankSum=1.489;VQSLOD=3.0189;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:34,22:46:99:997,0,534	0/0:5,0:5:12.04:0,12,213	./.	./.	0/0:9,0:7:15.03:0,15,219	0/1:23,8:25:99:339,0,442	0/1:49,26:65:99:980,0,1135	0/0:27,0:5:15.05:0,15,267	0/0:30,0:27:63.21:0,63,1103	0/1:16,10:24:99:556,0,462	0/0:4,4:7:3.01:0,3,53	0/0:59,0:50:96.32:0,96,1666	0/1:27,17:39:99:1026,0,724	0/1:27,21:45:99:1075,0,546	0/0:27,0:24:54.18:0,54,942	0/0:25,0:22:54.18:0,54,953	0/0:31,0:29:72.25:0,72,1271	0/1:29,13:34:99:692,0,762	0/0:11,0:8:21.07:0,21,374	0/0:6,0:5:9.03:0,9,160	0/0:156,0:137:99:0,309,5361	0/0:10,0:9:21.07:0,21,374	0/0:8,0:7:5.77:0,6,91	0/0:80,0:67:99:0,142,2453	0/0:13,0:9:11.99:0,12,180	0/1:28,1:20:26.10:26,0,793	0/0:16,0:15:36.12:0,36,638	0/0:10,0:7:21.07:0,21,374
chr10	39005813	.	CT	C	526.68	PASS	AB=0.837;AC=3;AF=0.060;AN=50;BaseQRankSum=2.800;DP=518;FS=4.897;HRun=1;HaplotypeScore=63.7180;InbreedingCoeff=-0.1119;MQ=34.54;MQ0=114;MQRankSum=1.182;QD=4.70;ReadPosRankSum=1.803;VQSLOD=0.6862;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:14:26.98:0,27,359	./.	0/1:43,1:2:35.93:36,0,41	0/0:41,0:4:5.99:0,6,88	0/0:14,0:13:14.99:0,15,205	0/0:14,0:8:14.94:0,15,178	0/0:27,0:19:18.74:0,19,259	0/1:9,2:4:14.85:15,0,62	0/0:24,0:23:57.11:0,57,817	0/0:19,0:10:30.10:0,30,428	0/0:9,0:4:3.01:0,3,47	0/0:24,0:19:33.04:0,33,474	0/0:24,0:15:30.02:0,30,408	0/0:17,0:10:11.97:0,12,158	0/0:23,0:23:66.01:0,66,870	0/0:21,0:21:39.13:0,39,601	0/0:23,0:23:63.13:0,63,949	0/0:14,0:12:24.08:0,24,375	0/0:7,0:1:3.01:0,3,44	./.	0/1:31,26:35:48.28:572,0,48	0/0:20,0:18:32.93:0,33,457	0/0:9,0:6:12.04:0,12,187	0/0:24,0:21:44.97:0,45,593	0/0:16,0:6:3.02:0,3,38	0/0:3,0:2:3.01:0,3,47	./.	0/0:2,0:1:3.01:0,3,47
chr10	39005949	.	A	ACACT	456.47	PASS	AC=16;AF=0.533;AN=30;BaseQRankSum=3.439;DP=305;FS=5.421;HRun=0;HaplotypeScore=45.9403;InbreedingCoeff=0.5464;MQ=35.43;MQ0=66;MQRankSum=-4.254;QD=4.75;ReadPosRankSum=-2.340;VQSLOD=0.5240;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:3,3:4:0.89:2,1,0	0/0:6,0:1:3.01:0,3,56	./.	./.	./.	1/1:8,0:2:3.01:67,3,0	1/1:10,16:21:3.01:80,3,0	./.	0/0:29,0:26:50.96:0,51,946	1/1:7,0:2:4.26:69,4,0	./.	1/1:4,17:13:3.01:72,3,0	./.	1/1:3,8:4:9.03:239,9,0	0/0:26,0:25:51.17:0,51,950	0/0:23,0:20:35.81:0,36,652	0/0:35,0:35:78.20:0,78,1380	1/1:1,3:3:3:26,3,0	./.	./.	./.	0/0:7,0:5:3.01:0,3,56	./.	1/1:8,1:5:2.97:20,3,0	0/0:7,0:3:3.01:0,3,56	./.	./.	./.
chr10	39006584	.	C	CT	76.32	PASS	AB=0.874;AC=9;AF=0.180;AN=50;BaseQRankSum=0.506;DP=490;FS=15.532;HRun=0;HaplotypeScore=52.1435;InbreedingCoeff=0.3087;MQ=45.10;MQ0=82;MQRankSum=-3.582;QD=0.91;ReadPosRankSum=-1.259;VQSLOD=-0.0773;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:25:51.05:0,51,649	0/0:4,0:4:5.94:0,6,67	0/0:16,0:7:18.06:0,18,239	0/0:21,0:7:21.07:0,21,293	0/0:5,0:4:6.02:0,6,84	0/1:11,0:8:1.73:2,0,52	0/0:51,0:38:78.14:0,78,1000	0/1:4,3:4:29.84:128,0,30	0/0:25,0:19:33.06:0,33,440	0/0:12,0:5:15.04:0,15,193	./.	0/0:23,0:18:18.24:0,18,399	0/0:22,0:17:41.96:0,42,496	0/0:20,0:17:35.90:0,36,392	0/0:15,0:10:18.05:0,18,235	0/0:15,0:12:29.91:0,30,352	0/0:26,0:23:54.12:0,54,687	0/0:21,0:17:23.56:0,24,458	0/0:9,0:2:3.01:0,3,42	1/1:3,0:1:0.89:2,1,0	0/1:43,4:26:10.60:11,0,47	./.	0/0:8,0:4:3.01:0,3,42	0/0:55,0:44:99:0,111,1272	0/0:13,0:7:11.98:0,12,111	1/1:10,0:2:2.97:20,3,0	1/1:6,0:3:2.99:24,3,0	./.
chr10	39006851	.	T	TC	601.30	PASS	AB=0.690;AC=8;AF=0.148;AN=54;BaseQRankSum=-1.520;DP=273;FS=5.341;HRun=1;HaplotypeScore=36.2401;InbreedingCoeff=0.1730;MQ=42.45;MQ0=71;MQRankSum=-2.461;QD=9.40;ReadPosRankSum=-1.076;VQSLOD=0.6625;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:2:3.01:0,3,42	0/0:3,0:1:3.01:0,3,42	./.	0/0:17,1:6:8.86:0,9,98	0/0:5,0:3:9.03:0,9,126	0/0:5,0:4:6.02:0,6,82	0/0:15,0:10:24.08:0,24,334	0/0:4,1:2:3:0,3,42	0/0:12,0:8:21.03:0,21,270	0/0:5,0:2:3.01:0,3,42	0/0:6,0:5:9.03:0,9,126	0/0:11,0:8:21.07:0,21,288	0/0:6,1:4:9.01:0,9,107	0/0:8,0:3:9.03:0,9,126	0/0:9,0:7:15.05:0,15,209	0/0:8,0:5:9.01:0,9,126	0/0:12,0:10:21.05:0,21,274	0/0:9,0:9:27.09:0,27,377	0/1:6,1:3:35.92:42,0,36	0/1:2,4:5:36.13:42,0,36	0/1:14,23:23:99:386,0,167	0/0:9,0:2:6.02:0,6,84	0/0:7,0:7:15.05:0,15,210	0/0:21,0:20:51.17:0,51,713	0/0:8,0:5:12.04:0,12,168	1/1:8,1:5:9.03:126,9,0	1/1:1,2:2:6.02:96,6,0	0/1:1,1:2:35.81:42,0,36
chr10	39006902	.	TCACTGCTCACCCCCAGCCTCACACC	T	2305.14	PASS	AB=0.925;AC=11;AF=0.204;AN=54;BaseQRankSum=4.509;DP=415;FS=21.485;HRun=0;HaplotypeScore=217.4928;InbreedingCoeff=0.7773;MQ=58.27;MQ0=19;MQRankSum=-3.012;QD=22.82;ReadPosRankSum=-0.989;VQSLOD=1.1976;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:36.12:0,36,2176	0/0:5,0:5:9.03:0,9,571	0/0:21,0:11:23.50:0,23,1299	0/0:16,0:6:5.98:0,6,47	0/0:11,0:11:23.69:0,24,1377	0/0:11,0:10:27.02:0,27,1623	0/0:26,0:23:60.16:0,60,3174	1/1:12,0:11:23.52:160,24,0	0/0:18,0:17:36.04:0,36,2132	0/0:14,0:14:36.12:0,36,2428	0/0:5,0:5:15.05:0,15,1327	0/0:14,0:13:29.92:0,30,1586	0/0:14,0:14:26.77:0,27,1483	0/0:12,0:10:27.09:0,27,1598	0/0:15,0:15:36.57:0,37,1235	0/0:12,0:12:33.11:0,33,1452	0/0:18,0:17:42.60:0,43,1999	0/0:12,0:11:24.03:0,24,1316	1/1:10,8:10:14.51:447,15,0	1/1:1,9:10:5.96:114,6,0	0/1:34,1:30:99:138,0,152	0/0:13,0:13:30.10:0,30,2187	0/0:15,0:14:39.03:0,39,2320	0/0:26,0:26:77.52:0,78,3947	0/0:17,0:15:33.11:0,33,2457	1/1:3,12:14:33.52:1196,34,0	1/1:2,7:9:3.32:412,3,0	./.
chr10	39006915	.	C	CCCT	402.62	PASS	AC=8;AF=0.148;AN=54;BaseQRankSum=6.574;DP=392;FS=13.327;HRun=0;HaplotypeScore=92.9094;InbreedingCoeff=0.7574;MQ=58.47;MQ0=13;MQRankSum=-2.596;QD=9.59;ReadPosRankSum=0.726;VQSLOD=1.9814;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:42.12:0,42,654	0/0:8,0:8:21:0,21,296	0/0:17,0:10:29.97:0,30,472	0/0:8,0:3:5.93:0,6,69	0/0:11,0:11:21.03:0,21,321	0/0:12,0:11:21.03:0,21,324	0/0:23,0:20:47.68:0,48,681	0/0:5,0:4:1.55:0,2,4	0/0:14,0:13:2.25:0,2,368	0/0:17,0:17:51.13:0,51,734	0/0:8,0:8:23.95:0,24,317	0/0:10,0:10:21.06:0,21,333	0/0:13,0:13:24.05:0,24,361	0/0:14,0:12:36.03:0,36,546	0/0:18,0:18:37.99:0,38,454	0/0:13,0:13:30.05:0,30,427	0/0:24,0:23:50.99:0,51,681	0/0:11,0:10:24.05:0,24,376	1/1:12,0:6:9:156,9,0	1/1:9,0:9:3.01:38,3,0	0/0:14,8:17:3.30:0,3,54	0/0:16,0:16:39.07:0,39,578	0/0:16,0:15:38.92:0,39,618	0/0:29,0:29:81.12:0,81,1179	0/0:18,0:16:39.02:0,39,574	1/1:13,0:12:22.21:256,22,0	1/1:8,0:8:8.94:90,9,0	./.
chr10	39007621	.	C	CCAGA	6776.37	PASS	AB=0.615;AC=13;AF=0.232;AN=56;BaseQRankSum=9.712;DP=573;FS=3.215;HRun=0;HaplotypeScore=107.9267;InbreedingCoeff=0.8867;MQ=70.23;MQ0=1;MQRankSum=-2.085;QD=44.29;ReadPosRankSum=-0.094;VQSLOD=5.4152;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:78.25:0,78,1269	0/0:6,0:6:15.05:0,15,239	0/0:13,0:13:11.69:0,12,338	0/0:20,0:20:27.58:0,28,531	0/0:14,0:14:24.08:0,24,397	0/0:21,0:21:45.15:0,45,746	0/0:31,0:31:75.24:0,75,1205	1/1:20,8:28:42.13:917,42,0	0/0:18,0:18:36.12:0,36,597	0/0:19,0:19:39.13:0,39,642	0/0:9,0:9:18.04:0,18,253	0/0:33,0:33:72.25:0,72,1191	0/0:12,0:12:27.07:0,27,413	0/0:28,0:28:72.24:0,72,1171	0/0:21,0:21:54.17:0,54,871	0/0:17,0:17:39.12:0,39,619	0/0:36,0:36:72.22:0,72,1160	0/0:29,0:30:75.25:0,75,1212	1/1:12,7:21:36.12:818,36,0	1/1:1,10:11:24.08:589,24,0	0/1:12,18:32:39.59:1240,0,40	0/0:15,0:15:27.08:0,27,420	0/0:10,0:10:18.06:0,18,298	0/0:19,0:19:42.14:0,42,686	0/0:12,0:12:36.12:0,36,597	1/1:10,15:25:54.19:1310,54,0	1/1:7,14:20:42.14:1018,42,0	1/1:3,12:15:36.12:885,36,0
chr10	39008117	.	G	GTC	9255.20	PASS	AB=0.548;AC=13;AF=0.232;AN=56;BaseQRankSum=-10.266;DP=750;FS=3.197;HRun=0;HaplotypeScore=99.4744;InbreedingCoeff=0.8973;MQ=87.65;MQ0=0;MQRankSum=-1.467;QD=47.71;ReadPosRankSum=0.356;VQSLOD=5.7006;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:64,0:63:99:0,193,2802	0/0:6,0:6:15.05:0,15,221	0/0:23,0:23:69.22:0,69,999	0/0:31,0:30:80.75:0,81,1159	0/0:25,0:25:72.24:0,72,1059	0/0:21,0:21:63.20:0,63,906	0/0:37,0:37:99:0,108,1588	1/1:3,25:28:78.24:1386,78,0	0/0:29,0:29:87.28:0,87,1261	0/0:24,0:23:69.23:0,69,1000	0/0:10,0:10:30.10:0,30,442	0/0:29,0:29:78.26:0,78,1148	0/0:29,0:28:75.20:0,75,1060	0/0:21,0:21:60.20:0,60,881	0/0:31,0:31:93.26:0,93,1324	0/0:21,0:21:57.19:0,57,839	0/0:34,0:34:96.28:0,96,1381	0/0:19,0:19:57.18:0,57,819	1/1:1,23:24:66.23:1232,66,0	1/1:1,18:19:44.39:833,44,0	1/1:3,52:55:99:2585,138,0	0/0:25,0:25:75.25:0,75,1104	0/0:23,0:23:66.22:0,66,970	0/0:35,0:35:99:0,105,1545	0/0:19,0:19:54.17:0,54,776	0/1:4,19:23:22.16:1029,0,22	1/1:1,34:36:90.31:1685,90,0	1/1:0,9:9:27.09:505,27,0
chr10	39008233	.	A	ATC	1198.32	PASS	AB=0.933;AC=20;AF=0.435;AN=46;BaseQRankSum=0.373;DP=729;FS=7.129;HRun=0;HaplotypeScore=122.5208;InbreedingCoeff=0.1343;MQ=67.98;MQ0=15;MQRankSum=-1.898;QD=3.29;ReadPosRankSum=-2.258;VQSLOD=1.7926;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:44:2.84:0,3,14	0/0:9,0:10:2.57:0,3,14	./.	./.	./.	0/0:20,0:21:3.61:0,4,15	0/1:21,0:26:0.63:1,0,31	./.	0/0:28,0:29:11.81:0,12,108	0/1:26,0:25:23.86:24,0,26	0/0:10,0:10:0:0,0,0	1/1:25,1:26:4.41:164,4,0	1/1:21,0:20:21:227,21,0	1/1:30,0:30:6.01:69,6,0	0/1:29,0:30:51.09:75,0,51	0/0:20,0:23:14.52:0,15,114	0/0:27,0:27:20.70:0,21,247	0/1:27,11:39:6.76:92,0,7	0/0:18,0:18:2.55:0,3,20	0/1:19,0:19:15.27:52,0,15	1/1:29,0:29:19.28:166,19,0	0/0:23,0:23:3.47:0,3,28	0/1:22,0:21:11.98:12,0,17	0/1:22,12:35:99:115,0,124	0/1:18,0:18:23.51:37,0,24	1/1:23,1:24:21.42:200,21,0	1/1:17,2:19:9.01:111,9,0	./.
chr10	39011322	.	TA	T	1704.99	PASS	AB=0.763;AC=21;AF=0.375;AN=56;BaseQRankSum=7.723;DP=568;FS=0.000;HRun=15;HaplotypeScore=68.5355;InbreedingCoeff=0.5953;MQ=81.27;MQ0=2;MQRankSum=1.309;QD=6.93;ReadPosRankSum=1.345;VQSLOD=2.6998;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,2:35:40.91:0,41,668	0/0:8,0:8:20.99:0,21,180	0/0:41,0:29:21.75:0,22,196	0/0:25,0:20:7.84:0,8,118	0/0:25,0:25:47.97:0,48,414	0/0:18,0:18:29.30:0,29,354	0/0:11,1:12:10.71:0,11,213	1/1:7,12:20:11.98:172,12,0	0/0:15,2:17:19.57:0,20,284	0/1:20,3:23:9.90:10,0,282	0/0:16,2:18:3.61:0,4,278	1/1:5,10:17:32.68:191,33,0	0/0:9,0:9:17.98:0,18,153	0/1:7,1:8:4.27:4,0,91	0/0:20,0:20:13.70:0,14,232	0/0:21,1:22:6.98:0,7,300	0/1:18,3:21:9.88:10,0,275	0/0:32,0:32:74.86:0,75,635	0/1:7,12:19:11.81:170,0,12	1/1:2,11:14:31.47:194,31,0	1/1:4,8:12:14.73:96,15,0	0/0:20,0:20:38.78:0,39,313	1/1:8,10:20:21.68:127,22,0	1/1:5,9:14:20.63:134,21,0	0/0:18,0:19:31.19:0,31,255	1/1:9,21:30:35.61:355,36,0	0/1:6,25:31:16.27:251,0,16	1/1:5,12:17:29.49:192,29,0
chr10	39012815	.	G	GA	3686.54	PASS	AB=0.798;AC=16;AF=0.286;AN=56;BaseQRankSum=-11.104;DP=849;FS=0.340;HRun=12;HaplotypeScore=140.3320;InbreedingCoeff=0.6442;MQ=69.12;MQ0=14;MQRankSum=0.963;QD=11.10;ReadPosRankSum=-0.391;VQSLOD=1.9592;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,26:32:46.74:576,47,0	0/0:14,0:14:28.81:0,29,202	0/1:64,0:29:71.96:72,0,81	0/1:57,0:21:23.31:41,0,23	0/0:45,0:49:99:0,103,804	0/1:5,16:22:19.10:291,0,19	0/1:7,10:17:52.74:171,0,53	0/0:24,0:24:31.43:0,31,90	0/0:19,1:21:23.53:0,24,327	1/1:12,36:51:72.04:991,72,0	1/1:9,19:31:27.92:540,28,0	0/0:6,0:34:50.77:0,51,173	1/1:3,14:18:38.90:365,39,0	1/1:6,11:19:16.40:267,16,0	0/0:29,0:29:71.16:0,71,502	0/0:26,1:28:44.44:0,44,478	0/0:29,0:31:72.66:0,73,515	1/1:2,15:19:23.06:372,23,0	0/0:26,0:24:29.76:0,30,86	0/0:34,0:35:49.60:0,50,142	0/0:11,0:11:16.29:0,16,47	0/0:28,1:33:36.63:0,37,477	0/0:3,0:24:40.45:0,40,118	0/0:5,0:25:30.54:0,31,88	0/0:25,0:25:15.16:0,15,275	0/0:41,0:42:39.27:0,39,132	0/0:36,0:36:56.55:0,57,162	0/0:30,0:30:37.89:0,38,109
chr10	39012826	.	AAC	A	6020.44	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=7.619;DP=815;FS=4.776;HRun=0;HaplotypeScore=140.8733;InbreedingCoeff=0.9441;MQ=71.25;MQ0=12;MQRankSum=-1.634;QD=24.98;ReadPosRankSum=-0.645;VQSLOD=5.3418;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:68.68:0,69,875	0/0:12,0:12:33.96:0,34,525	0/0:61,0:30:47.78:0,48,539	0/1:46,0:16:1.73:2,0,125	0/0:49,0:49:99:0,132,2173	0/0:22,0:22:51.16:0,51,690	0/0:17,0:17:42.10:0,42,546	1/1:2,20:22:64.85:745,65,0	0/0:24,0:24:69.11:0,69,1053	0/0:49,0:49:99:0,146,1673	0/0:29,0:29:82.49:0,82,957	0/0:30,1:31:33.62:0,34,401	0/0:19,0:19:51.05:0,51,636	0/0:19,0:18:45.12:0,45,573	0/0:31,0:31:93.01:0,93,1408	0/0:27,0:27:81.09:0,81,1302	0/0:30,0:30:81.05:0,81,1317	0/0:20,0:20:51.15:0,51,645	1/1:2,24:26:51.19:779,51,0	1/1:2,30:32:87.06:1072,87,0	1/1:0,14:14:24.07:327,24,0	0/0:32,0:32:93.03:0,93,1455	0/0:26,0:26:64.88:0,65,413	0/0:24,0:24:44.76:0,45,301	0/0:21,0:21:60.62:0,61,938	1/1:5,30:35:75.18:1143,75,0	1/1:1,36:37:89.78:1178,90,0	1/1:0,27:27:57.19:774,57,0
chr10	39012827	.	AC	A	2933.99	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=13.554;DP=811;FS=1.023;HRun=2;HaplotypeScore=137.6748;InbreedingCoeff=0.9942;MQ=71.48;MQ0=10;MQRankSum=-1.933;QD=15.28;ReadPosRankSum=-0.452;VQSLOD=3.3166;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:71.24:0,71,575	0/0:12,0:12:32.86:0,33,361	0/0:56,1:30:39.31:0,39,353	0/0:42,2:15:16.44:0,16,116	0/0:49,0:49:99:0,127,1487	0/0:21,0:21:50.94:0,51,464	0/0:17,0:17:41.96:0,42,393	1/1:20,2:22:65.05:458,65,0	0/0:24,0:24:65.87:0,66,750	0/0:50,0:50:99:0,139,1094	0/0:29,0:30:82.39:0,82,642	0/0:31,0:31:19.89:0,20,108	0/0:19,0:19:50.47:0,50,415	0/0:19,0:18:44.91:0,45,386	0/0:31,0:31:75.22:0,75,950	0/0:29,0:29:82.62:0,83,924	0/0:30,0:30:70.98:0,71,940	0/0:20,0:20:50.82:0,51,407	1/1:25,0:25:70.51:475,71,0	1/1:32,0:32:85.18:511,85,0	1/1:14,0:14:23.54:141,24,0	0/0:32,0:32:85.42:0,85,1009	0/0:26,0:26:17.26:0,17,127	0/0:24,0:24:22.55:0,23,115	0/0:21,0:21:59.94:0,60,656	1/1:33,2:35:89.44:686,89,0	1/1:36,1:37:87.62:529,88,0	1/1:27,0:27:55.86:333,56,0
chr10	39012992	.	G	GA	8365.06	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=12.764;DP=680;FS=0.317;HRun=1;HaplotypeScore=86.7066;InbreedingCoeff=0.9861;MQ=76.90;MQ0=1;MQRankSum=-2.109;QD=44.03;ReadPosRankSum=-0.499;VQSLOD=4.4148;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,108,1509	0/0:4,0:4:12.04:0,12,168	0/0:14,0:14:14.61:0,15,389	0/0:20,0:20:12.55:0,13,583	0/0:22,0:22:66.22:0,66,921	0/0:20,0:20:54.18:0,54,753	0/0:35,0:35:99:0,102,1406	1/1:1,21:22:60.18:935,60,0	0/0:25,0:24:66.22:0,66,921	0/0:32,0:32:96.32:0,96,1340	0/0:15,0:15:42.14:0,42,584	0/0:29,0:29:87.26:0,87,1176	0/0:22,0:22:66.22:0,66,917	0/0:37,0:36:99:0,108,1509	0/0:32,0:32:93.29:0,93,1282	0/0:28,0:28:84.28:0,84,1174	0/0:30,0:30:90.28:0,90,1241	0/0:16,0:16:48.16:0,48,669	1/1:1,25:25:72.23:1128,72,0	1/1:0,12:12:36.08:548,36,0	1/1:2,74:76:99:3310,208,0	0/0:11,0:11:30.10:0,30,418	0/0:11,0:11:30.10:0,30,417	0/0:32,0:32:96.30:0,96,1323	0/0:16,0:16:45.15:0,45,628	1/1:0,18:18:51.17:815,51,0	1/1:1,16:17:45.15:719,45,0	1/1:0,19:19:57.19:911,57,0
chr10	39013572	.	A	AGT	1084.33	PASS	AB=0.872;AC=11;AF=0.196;AN=56;BaseQRankSum=8.554;DP=485;FS=12.871;HRun=0;HaplotypeScore=63.9442;InbreedingCoeff=0.5293;MQ=42.47;MQ0=84;MQRankSum=-0.427;QD=12.61;ReadPosRankSum=-1.431;VQSLOD=1.4593;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:36:74.15:0,74,856	0/0:10,0:9:23.88:0,24,246	0/0:28,0:8:5.43:0,5,126	0/0:21,0:1:2.80:0,3,13	0/0:22,0:21:60.62:0,61,703	0/0:18,0:15:38.88:0,39,444	0/0:20,0:17:48.14:0,48,574	1/1:12,6:12:33.07:410,33,0	0/0:9,0:5:12.04:0,12,148	0/0:22,0:21:54.10:0,54,647	0/0:19,0:19:51.16:0,51,639	0/0:10,0:10:26.87:0,27,312	0/0:6,0:5:15.04:0,15,181	0/0:11,0:10:24.07:0,24,280	0/0:15,0:11:27.08:0,27,332	0/0:13,0:12:36.11:0,36,450	0/0:51,0:43:99:0,101,1163	0/0:33,0:19:39.12:0,39,494	0/1:9,0:4:26.35:105,0,26	1/1:5,7:11:5.24:69,5,0	1/1:8,0:6:5.32:74,5,0	0/0:2,0:1:3.01:0,3,39	0/0:9,0:8:23.98:0,24,277	0/0:24,0:20:32.95:0,33,339	0/0:16,0:13:39.11:0,39,477	0/1:6,10:14:9.39:286,0,9	1/1:10,0:8:20.87:234,21,0	0/1:11,0:4:29.38:64,0,29
chr10	39014485	.	A	AAAAAC	9006.36	PASS	AC=30;AF=0.577;AN=52;BaseQRankSum=-11.389;DP=700;FS=4.457;HRun=0;HaplotypeScore=138.7345;InbreedingCoeff=0.9177;MQ=67.93;MQ0=7;MQRankSum=0.709;QD=24.74;ReadPosRankSum=-5.146;VQSLOD=3.6457;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:9,19:28:42.14:1158,42,0	0/0:4,0:7:3.01:0,3,35	./.	./.	0/0:22,0:36:20.98:0,21,244	1/1:9,6:17:12.04:321,12,0	1/1:20,3:25:12.04:299,12,0	1/1:28,0:28:5.98:58,6,0	0/0:15,0:27:21.06:0,21,245	1/1:18,7:28:32.84:656,33,0	1/1:16,7:24:21.07:573,21,0	0/0:24,0:24:30.08:0,30,473	1/1:11,4:15:9.03:247,9,0	1/1:13,13:28:24.08:662,24,0	0/0:11,0:26:35.97:0,36,399	0/0:11,0:22:35.78:0,36,395	0/0:19,0:39:51.15:0,51,593	1/1:12,8:19:15.05:408,15,0	1/1:6,3:8:9.01:171,9,0	1/1:22,16:40:57.11:1478,57,0	1/1:13,5:20:14.03:412,14,0	0/0:16,0:30:18.01:0,18,210	0/0:33,0:32:42.10:0,42,738	0/0:31,0:32:51.15:0,51,825	0/0:10,0:24:32.99:0,33,365	1/1:22,13:35:48.13:1141,48,0	1/1:15,17:33:42.14:1093,42,0	1/1:5,6:11:12.04:331,12,0
chr10	39016734	.	AT	A	4466.84	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=12.944;DP=702;FS=0.686;HRun=8;HaplotypeScore=67.2759;InbreedingCoeff=0.9992;MQ=90.45;MQ0=0;MQRankSum=-1.973;QD=24.28;ReadPosRankSum=-1.112;VQSLOD=5.1363;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:84.21:0,84,988	0/0:9,0:9:27.08:0,27,326	0/0:32,0:32:71.32:0,71,859	0/0:23,0:22:57.16:0,57,658	0/0:17,0:17:36.11:0,36,435	0/0:27,0:27:69.18:0,69,802	0/0:28,0:28:72.22:0,72,870	1/1:4,27:31:81.12:782,81,0	0/0:24,0:24:63.18:0,63,750	0/0:30,0:30:40.83:0,41,769	0/0:17,1:18:22.15:0,22,530	0/0:33,0:33:93.26:0,93,1102	0/0:33,0:33:93.27:0,93,1111	0/0:24,0:24:69.20:0,69,822	0/0:29,0:29:84.25:0,84,1003	0/0:20,0:20:48.15:0,48,580	0/0:24,0:24:60.18:0,60,725	0/0:27,0:27:75.15:0,75,864	1/1:3,17:20:51.04:477,51,0	1/1:1,20:21:54.08:521,54,0	1/1:4,32:36:84.12:811,84,0	0/0:25,0:25:66.20:0,66,787	0/0:20,0:20:51.16:0,51,616	0/0:24,0:24:72.20:0,72,847	0/0:18,0:18:51.05:0,51,596	1/1:1,32:33:59.91:862,60,0	1/1:4,21:25:60.09:579,60,0	1/1:3,15:18:45.07:434,45,0
chr10	39017741	.	GTA	G	5663.60	PASS	AB=0.610;AC=7;AF=0.125;AN=56;BaseQRankSum=11.911;DP=1286;FS=5.459;HRun=0;HaplotypeScore=182.3109;InbreedingCoeff=0.8868;MQ=55.85;MQ0=15;MQRankSum=5.450;QD=32.00;ReadPosRankSum=0.505;VQSLOD=5.9533;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,11:24:12.66:316,13,0	0/0:13,0:13:39.12:0,39,673	0/0:48,3:18:39.28:0,39,565	0/0:38,0:18:48.04:0,48,675	0/0:29,0:28:81.26:0,81,1453	0/0:31,0:31:90.28:0,90,1576	0/0:28,0:27:66.17:0,66,1074	0/0:83,0:75:99:0,193,3095	0/0:49,0:49:99:0,138,2422	1/1:19,64:80:99:3282,231,0	1/1:0,33:32:78.26:1117,78,0	0/0:79,1:80:99:0,217,3865	0/0:50,0:50:99:0,141,2528	0/0:36,0:36:99:0,105,1859	0/0:67,0:67:99:0,190,3308	0/0:56,0:56:99:0,157,2828	0/0:45,0:45:62.43:0,62,1368	0/1:13,23:36:2.99:948,0,3	0/0:23,0:15:42.14:0,42,741	0/0:46,0:46:99:0,120,2095	0/0:59,1:59:99:0,146,2577	0/0:59,0:59:99:0,172,3013	0/0:42,0:42:99:0,123,2146	0/0:40,0:41:49.24:0,49,1175	0/0:33,0:33:96.33:0,96,1742	0/0:97,1:96:99:0,240,4852	0/0:28,0:28:78.22:0,78,1335	0/0:23,0:23:66.14:0,66,1171
chr10	39018080	.	TG	T	7169.03	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=18.321;DP=965;FS=8.379;HRun=1;HaplotypeScore=160.9715;InbreedingCoeff=0.9992;MQ=54.80;MQ0=17;MQRankSum=0.622;QD=32.89;ReadPosRankSum=-2.768;VQSLOD=2.9071;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,2:46:60.74:0,61,1176	0/0:16,0:16:48.16:0,48,767	0/0:43,0:9:21.03:0,21,298	0/0:45,0:14:34.32:0,34,543	0/0:24,0:24:72.24:0,72,1141	0/0:28,0:28:50.80:0,51,1014	0/0:24,0:24:57.19:0,57,905	1/1:7,33:37:68.18:1217,68,0	0/0:32,0:31:90.29:0,90,1406	0/0:61,0:61:99:0,179,2741	0/0:31,0:31:72.25:0,72,1145	0/0:45,0:45:99:0,123,1966	0/0:38,0:38:99:0,105,1670	0/0:39,0:39:99:0,102,1630	0/0:40,0:40:99:0,114,1822	0/0:41,0:41:99:0,123,1937	0/0:33,0:32:76.51:0,77,1103	0/0:33,0:33:96.34:0,96,1446	1/1:1,24:25:36.16:837,36,0	1/1:0,36:36:99:1249,99,0	1/1:1,36:37:68.51:1191,69,0	0/0:33,0:33:99:0,99,1582	0/0:31,0:31:90.28:0,90,1404	0/0:35,0:35:62.95:0,63,972	0/0:29,0:29:87.29:0,87,1355	1/1:2,33:34:52.58:1190,53,0	1/1:0,21:21:60.12:744,60,0	1/1:0,22:22:57.19:740,57,0
chr10	39018143	.	C	CTT	4303.35	PASS	AB=0.889;AC=30;AF=0.536;AN=56;BaseQRankSum=2.606;DP=725;FS=2.543;HRun=16;HaplotypeScore=183.2186;InbreedingCoeff=0.6968;MQ=62.57;MQ0=16;MQRankSum=-5.255;QD=9.54;ReadPosRankSum=-5.560;VQSLOD=0.2678;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:28,11:38:32.22:583,32,0	0/0:11,0:11:8.61:0,9,67	0/1:16,0:13:17.82:18,0,20	0/1:12,0:12:0.38:0,0,11	0/0:22,0:22:16.13:0,16,111	1/1:21,2:25:46.34:357,46,0	1/1:18,0:18:21.51:132,22,0	1/1:28,12:41:5.08:297,5,0	0/0:12,0:13:2.15:0,2,42	1/1:42,9:51:72.73:609,73,0	1/1:11,2:23:39.17:296,39,0	0/0:26,0:26:32.75:0,33,193	1/1:27,3:31:37.93:383,38,0	0/1:13,13:26:5.30:152,0,5	0/0:27,0:30:14.78:0,15,166	0/0:27,0:28:33.54:0,34,240	0/0:31,0:32:38.74:0,39,280	1/1:19,3:21:27.74:234,28,0	1/1:25,1:24:23.97:193,24,0	1/1:25,3:29:32.38:333,32,0	0/1:16,1:15:12.54:46,0,13	0/0:28,0:29:15.40:0,15,176	0/0:16,0:19:7.73:0,8,85	0/0:31,0:33:28.52:0,29,181	0/0:23,0:29:30.36:0,30,231	1/1:26,1:27:26.86:208,27,0	1/1:19,6:26:25.65:358,26,0	1/1:8,1:10:14.28:105,14,0
chr10	39018861	.	TTGTGTG	T	1019.93	PASS	AB=0.760;AC=19;AF=0.365;AN=52;BaseQRankSum=6.910;DP=425;FS=8.485;HRun=0;HaplotypeScore=97.3144;InbreedingCoeff=0.5377;MQ=57.77;MQ0=11;MQRankSum=-3.912;QD=6.18;ReadPosRankSum=0.360;VQSLOD=1.3399;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:16,5:20:12.04:245,12,0	0/0:4,0:4:9.03:0,9,260	./.	./.	0/0:18,0:18:24.08:0,24,580	1/1:7,6:13:15.05:306,15,0	1/1:6,0:6:3.01:58,3,0	0/0:24,0:23:12.04:0,12,235	0/0:8,0:8:15.04:0,15,353	1/1:20,0:19:0.63:57,1,0	0/1:11,7:19:4.32:94,0,4	1/1:15,0:19:3.90:8,4,0	1/1:10,4:16:10.23:132,10,0	0/1:4,0:9:0.38:0,0,32	0/0:15,0:18:24.08:0,24,608	0/0:15,0:15:21.07:0,21,412	0/0:34,0:34:50.25:0,50,1545	1/1:7,4:11:12.04:245,12,0	0/0:21,0:19:19.30:0,19,343	0/0:12,0:11:2.98:0,3,22	0/0:9,0:8:3.01:0,3,69	0/0:18,0:19:20.19:0,20,507	0/0:9,0:16:1.12:0,1,55	1/1:9,0:16:4.42:9,4,0	0/1:8,0:14:29.89:30,0,215	0/0:16,0:13:19.60:0,20,389	0/0:17,0:17:12.04:0,12,289	0/0:2,0:2:3.01:0,3,66
chr10	39019701	.	AACACACACACACACACACACACACAC	A	5578.76	PASS	AB=0.742;AC=17;AF=0.315;AN=54;BaseQRankSum=8.503;DP=590;FS=23.661;HRun=0;HaplotypeScore=361.3629;InbreedingCoeff=0.8376;MQ=60.72;MQ0=11;MQRankSum=-7.165;QD=28.76;ReadPosRankSum=-1.106;VQSLOD=1.6122;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:28,9:37:15.03:685,15,0	0/0:8,0:9:18.95:0,19,1723	0/0:29,0:19:12.48:0,12,258	0/0:33,0:23:24.08:0,24,813	0/0:27,0:29:30.10:0,30,2651	1/1:8,10:17:15.05:883,15,0	./.	0/0:18,0:18:21.07:0,21,1031	0/0:22,0:22:36.12:0,36,3309	1/1:26,9:36:27.73:1432,28,0	1/1:9,5:14:5.98:222,6,0	1/1:9,0:17:11.44:298,11,0	1/1:12,7:19:18.06:1168,18,0	1/1:8,3:11:8.70:345,9,0	0/0:26,0:28:42.14:0,42,3924	0/0:14,0:17:30.10:0,30,2743	0/0:20,0:21:42.14:0,42,3546	0/0:20,0:19:6.02:0,6,248	0/0:13,0:16:27.09:0,27,1649	0/0:9,0:11:21.07:0,21,1008	0/0:32,0:31:32.58:0,33,2811	0/0:14,0:13:21.07:0,21,2073	1/1:8,0:19:20.53:140,21,0	0/1:15,0:23:93.78:405,0,94	0/0:17,0:22:26.51:0,27,1699	0/0:17,0:17:27.09:0,27,1632	0/0:27,0:34:33.58:0,34,1667	0/0:2,0:4:9.03:0,9,641
chr10	39022727	.	G	GT	1692.27	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-8.735;DP=565;FS=1.136;HRun=8;HaplotypeScore=58.1899;InbreedingCoeff=0.9927;MQ=69.25;MQ0=1;MQRankSum=-0.506;QD=26.44;ReadPosRankSum=-0.275;VQSLOD=4.1558;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:81.85:0,82,734	0/0:10,0:10:27.01:0,27,247	0/0:10,0:10:20.39:0,20,157	0/0:11,0:10:18.01:0,18,164	0/0:44,0:44:87.03:0,87,796	1/1:2,21:23:57.13:643,57,0	1/1:2,14:16:39.12:450,39,0	0/0:43,0:43:83.99:0,84,759	0/0:15,0:15:45.01:0,45,407	0/0:20,0:20:48.01:0,48,437	0/0:17,0:17:45.02:0,45,412	0/0:9,0:9:21.01:0,21,192	1/1:2,15:17:48.14:551,48,0	1/1:0,8:8:18.05:208,18,0	0/0:18,0:18:51.03:0,51,467	0/0:21,0:19:60.03:0,60,549	0/0:18,0:18:50.97:0,51,463	0/0:20,0:20:54.50:0,54,495	0/0:27,0:27:75.03:0,75,683	0/0:25,0:25:65.04:0,65,625	0/0:14,0:16:46.08:0,46,392	0/0:16,0:16:45.02:0,45,412	0/0:22,0:22:57.01:0,57,519	0/0:16,0:16:48.02:0,48,435	0/0:17,0:17:48.02:0,48,436	0/0:26,0:26:75.03:0,75,684	0/0:28,0:28:69.02:0,69,628	0/0:22,0:22:63.03:0,63,576
chr10	39024115	.	C	CA	6663.51	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=17.571;DP=694;FS=8.360;HRun=1;HaplotypeScore=79.9074;InbreedingCoeff=0.9981;MQ=67.78;MQ0=0;MQRankSum=-1.624;QD=39.66;ReadPosRankSum=3.972;VQSLOD=5.2625;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,108,1400	1/1:0,6:6:18.06:252,18,0	0/0:15,0:15:35.29:0,35,488	0/0:28,0:23:66.07:0,66,819	1/1:1,25:26:72.24:1003,72,0	0/0:17,0:17:42.12:0,42,531	0/0:26,0:26:75.22:0,75,945	0/0:28,0:28:66.20:0,66,834	1/1:0,26:26:75.25:1054,75,0	0/0:41,0:41:99:0,117,1507	0/0:20,0:20:54.15:0,54,672	0/0:28,0:28:84.26:0,84,1074	0/0:23,0:23:69.22:0,69,896	0/0:19,0:19:57.19:0,57,740	1/1:0,28:28:84.28:1178,84,0	1/1:0,23:23:66.22:922,66,0	1/1:0,34:34:96.32:1341,96,0	0/0:32,0:32:96.30:0,96,1231	0/0:20,0:20:54.18:0,54,701	0/0:24,0:24:66.20:0,66,837	0/0:34,0:34:99:0,99,1237	1/1:0,25:25:66.22:914,66,0	0/0:23,0:23:57.14:0,57,739	0/0:23,0:23:69.18:0,69,875	0/0:21,0:21:60.17:0,60,763	0/0:29,0:29:81.24:0,81,1015	0/0:31,0:29:93.26:0,93,1188	0/0:8,0:8:24.08:0,24,312
chr10	39026031	.	A	AT	418.40	PASS	AB=1.000;AC=10;AF=0.185;AN=54;BaseQRankSum=-2.146;DP=221;FS=8.376;HRun=8;HaplotypeScore=41.7877;InbreedingCoeff=0.5495;MQ=71.07;MQ0=1;MQRankSum=-1.214;QD=10.73;ReadPosRankSum=0.347;VQSLOD=0.9398;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:10,0:12:6.77:7,0,70	0/0:3,0:2:6:0,6,55	0/0:10,0:7:14.68:0,15,120	0/1:4,0:3:0:0,0,0	0/0:13,0:13:33.02:0,33,302	1/1:1,6:7:18.05:208,18,0	1/1:1,2:3:6.02:69,6,0	0/0:25,0:25:61.87:0,62,468	0/0:2,0:2:6:0,6,55	0/0:8,0:8:20.75:0,21,174	0/0:6,0:6:8.68:0,9,61	0/0:2,0:2:3:0,3,27	1/1:1,4:5:9.03:104,9,0	1/1:2,6:8:15.04:173,15,0	0/0:8,0:8:18.01:0,18,165	0/0:3,0:3:6:0,6,55	0/0:20,0:20:42.03:0,42,397	0/0:12,0:15:27.60:0,28,169	0/0:8,0:8:17.93:0,18,153	0/0:5,0:5:9:0,9,79	0/0:3,0:3:9:0,9,79	./.	0/0:1,0:1:3:0,3,27	0/0:2,0:2:3:0,3,27	0/0:16,0:16:9.66:0,10,48	0/0:9,0:9:0.03:0,0,109	0/0:5,0:5:8.48:0,8,60	0/0:16,0:15:41.97:0,42,360
chr10	39026033	.	TTTTTTTA	T	3094.63	PASS	AB=1.000;AC=25;AF=0.481;AN=52;BaseQRankSum=-3.517;DP=217;FS=15.956;HRun=0;HaplotypeScore=55.5691;InbreedingCoeff=0.7171;MQ=71.17;MQ0=1;MQRankSum=-2.947;QD=24.18;ReadPosRankSum=-0.544;VQSLOD=1.1743;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:11:6.67:300,7,0	0/0:3,0:2:6.02:0,6,84	0/0:10,0:7:14.94:0,15,154	0/0:4,0:3:2.74:0,3,12	0/0:13,0:13:33.01:0,33,444	0/0:7,0:7:18.06:0,18,311	0/0:3,0:3:6.02:0,6,80	1/1:25,0:25:56.93:619,57,0	0/1:3,0:3:4.23:4,0,14	1/1:7,0:7:21.07:331,21,0	1/1:6,0:6:12.04:204,12,0	0/0:2,0:2:3.01:0,3,42	0/0:5,0:5:8.89:0,9,92	0/0:8,0:8:18.06:0,18,272	0/0:8,0:8:15.05:0,15,207	0/0:3,0:3:5.98:0,6,61	0/0:19,0:19:41.83:0,42,460	1/1:15,0:15:30.10:518,30,0	1/1:8,0:8:11.93:125,12,0	1/1:5,0:5:8.98:90,9,0	1/1:3,0:3:6.02:88,6,0	./.	0/0:1,0:1:3.01:0,3,42	./.	1/1:2,13:15:9.03:211,9,0	1/1:9,0:9:3.25:185,3,0	1/1:5,0:5:9.03:137,9,0	1/1:16,0:15:41.91:474,42,0
chr10	39026040	.	ATTT	A	2387.33	PASS	AB=1.000;AC=25;AF=0.481;AN=52;BaseQRankSum=-0.423;DP=195;FS=8.586;HRun=8;HaplotypeScore=40.1042;InbreedingCoeff=0.4624;MQ=64.36;MQ0=2;MQRankSum=-2.371;QD=17.18;ReadPosRankSum=2.441;VQSLOD=-0.1976;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,2:10:9.50:222,9,0	0/0:3,0:2:6.02:0,6,84	0/0:8,0:5:14.94:0,15,154	0/0:5,0:2:2.74:0,3,12	0/0:11,0:11:19.22:0,19,348	0/0:7,0:7:7.17:0,7,170	0/0:3,0:3:9.01:0,9,100	1/1:24,0:23:19.64:544,20,0	1/1:3,0:3:4.07:12,4,0	1/1:7,0:7:16.23:241,16,0	1/1:4,0:4:11.87:141,12,0	0/0:1,0:1:3.01:0,3,42	0/0:3,0:3:8.89:0,9,92	0/0:6,0:6:12.86:0,13,171	0/0:6,0:6:14.75:0,15,155	0/1:2,0:2:1.33:1,0,37	0/1:18,0:18:7.19:7,0,237	1/1:11,3:14:28.53:354,29,0	1/1:7,0:7:0.87:79,1,0	0/1:5,0:5:14.05:78,0,14	1/1:3,0:3:6.02:88,6,0	./.	0/0:1,0:1:3.01:0,3,42	./.	0/1:15,0:15:7.95:58,0,8	0/1:9,0:8:6.13:119,0,6	1/1:2,1:3:9.03:116,9,0	1/1:15,0:14:41.97:501,42,0
chr10	39026043	.	T	TA	3165.89	PASS	AB=0.813;AC=22;AF=0.423;AN=52;BaseQRankSum=-4.633;DP=195;FS=19.604;HRun=0;HaplotypeScore=31.1823;InbreedingCoeff=0.6406;MQ=63.32;MQ0=2;MQRankSum=-1.998;QD=27.77;ReadPosRankSum=1.699;VQSLOD=2.0755;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,7:10:9.71:259,10,0	0/0:2,0:2:6.02:0,6,84	0/0:9,0:5:14.94:0,15,154	0/0:9,0:2:2.68:0,3,11	0/0:9,0:11:33.04:0,33,404	0/0:7,0:7:17.97:0,18,182	0/0:3,0:3:9.01:0,9,99	1/1:5,19:23:5.83:735,6,0	0/0:0,0:2:5.82:0,6,36	1/1:0,7:7:21.07:319,21,0	1/1:0,4:4:12.04:182,12,0	0/0:1,0:1:3.01:0,3,42	0/0:3,0:3:8.89:0,9,92	0/0:6,0:6:18.01:0,18,195	0/0:5,0:5:15.05:0,15,209	0/0:1,0:2:5.99:0,6,63	0/0:14,0:18:42.01:0,42,467	1/1:9,8:16:35.97:460,36,0	1/1:1,4:5:12.04:182,12,0	0/1:2,3:5:14.83:104,0,15	1/1:0,2:2:6.02:91,6,0	./.	0/0:1,0:1:3.01:0,3,42	./.	0/1:14,0:14:13.82:50,0,14	1/1:4,4:7:15.52:227,16,0	1/1:1,2:3:9.03:136,9,0	1/1:1,14:14:42.07:609,42,0
chr10	39026086	.	T	TA	504.02	PASS	AB=0.682;AC=6;AF=0.115;AN=52;BaseQRankSum=-3.150;DP=213;FS=2.157;HRun=0;HaplotypeScore=33.7273;InbreedingCoeff=0.3401;MQ=40.83;MQ0=17;MQRankSum=-1.177;QD=12.29;ReadPosRankSum=1.308;VQSLOD=3.9310;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:7,3:8:49.71:50,0,104	0/0:2,0:1:2.98:0,3,21	0/0:17,0:3:8.98:0,9,74	./.	0/0:8,0:8:14.86:0,15,102	0/0:4,0:4:8.81:0,9,68	0/0:4,0:3:0:0,0,0	0/0:24,0:21:59.95:0,60,682	0/0:3,0:3:5.90:0,6,38	1/1:0,4:4:11.92:102,12,0	1/1:0,5:5:6.01:78,6,0	0/0:1,0:1:2.98:0,3,21	0/0:2,0:2:2.98:0,3,21	0/0:4,0:4:11.74:0,12,76	0/0:2,0:2:6:0,6,63	0/0:5,0:5:12.01:0,12,142	0/0:16,0:14:17.89:0,18,144	0/1:7,14:19:41.45:393,0,41	0/0:7,0:5:8.94:0,9,94	0/0:5,0:4:6.02:0,6,83	0/0:6,0:1:0:0,0,0	0/0:3,0:3:8.96:0,9,83	0/0:4,0:3:5.95:0,6,41	./.	0/0:8,0:8:14.58:0,15,108	0/0:9,0:7:18.02:0,18,221	0/0:11,0:9:15.02:0,15,186	0/0:13,0:13:21.99:0,22,304
chr10	39026162	.	AC	A	2189.81	PASS	AB=0.550;AC=20;AF=0.357;AN=56;BaseQRankSum=6.919;DP=338;FS=15.850;HRun=5;HaplotypeScore=37.4139;InbreedingCoeff=0.7548;MQ=67.57;MQ0=9;MQRankSum=-0.360;QD=20.47;ReadPosRankSum=-0.102;VQSLOD=1.7134;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:57.19:0,57,771	0/0:1,0:1:3.01:0,3,41	0/0:18,0:9:19.27:0,19,169	0/0:17,0:6:10.10:0,10,68	0/0:14,0:14:33.11:0,33,450	1/1:0,10:10:24.07:272,24,0	1/1:2,5:7:12.03:134,12,0	0/1:3,9:12:9.73:276,0,10	0/0:5,0:5:12.04:0,12,164	0/0:13,0:13:33.08:0,33,427	0/0:11,0:10:18.04:0,18,220	0/0:10,0:10:30.10:0,30,406	0/1:1,8:9:22.68:151,0,23	1/1:0,2:2:6.02:68,6,0	0/0:5,0:5:12.04:0,12,164	0/0:4,0:4:3.01:0,3,41	0/0:28,0:27:69.19:0,69,920	0/0:25,0:23:51.16:0,51,681	1/1:3,6:7:15.04:170,15,0	1/1:2,5:6:12.03:136,12,0	1/1:1,9:9:24.07:272,24,0	0/0:10,0:10:23.99:0,24,273	0/0:10,0:10:27.07:0,27,347	0/0:23,0:22:63.21:0,63,860	0/0:13,0:13:35.70:0,36,443	1/1:0,5:5:15.01:157,15,0	1/1:1,15:15:33.09:374,33,0	1/1:15,5:19:38.92:385,39,0
chr10	39026260	.	CTCT	C	111.99	PASS	AB=0.979;AC=10;AF=0.179;AN=56;BaseQRankSum=6.255;DP=388;FS=9.559;HRun=0;HaplotypeScore=70.9555;InbreedingCoeff=-0.0276;MQ=65.08;MQ0=4;MQRankSum=-2.466;QD=0.81;ReadPosRankSum=1.076;VQSLOD=0.6124;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:42.62:0,43,287	0/0:3,0:3:9.02:0,9,149	0/1:19,0:7:18.37:18,0,83	0/0:14,0:6:3.96:0,4,48	0/0:14,0:13:28.30:0,28,440	0/0:12,0:12:30.43:0,30,171	0/0:17,0:17:22.34:0,22,181	0/1:23,0:23:47.09:47,0,139	0/0:5,0:5:14.89:0,15,123	0/0:14,0:14:34.92:0,35,265	0/0:7,0:7:19.97:0,20,157	0/0:14,0:14:17.84:0,18,191	0/0:14,0:14:24.28:0,24,138	0/0:10,0:10:25.70:0,26,157	0/0:10,0:10:24.95:0,25,421	0/0:10,0:10:27.08:0,27,440	0/0:23,0:24:63.15:0,63,985	0/1:19,0:19:6.90:7,0,162	0/1:16,4:20:56.78:57,0,179	0/1:14,0:14:32.25:32,0,62	1/1:4,0:4:5.55:27,6,0	0/0:11,0:10:30.08:0,30,515	0/0:10,0:10:17.14:0,17,107	0/0:18,0:18:25.63:0,26,145	0/0:19,0:19:36.07:0,36,223	0/1:14,0:13:19.36:19,0,108	0/1:13,0:12:12.88:13,0,26	0/1:12,0:12:26.32:33,0,26
chr10	39026262	.	CTT	C	2225.32	PASS	AB=0.800;AC=38;AF=0.679;AN=56;BaseQRankSum=0.820;DP=393;FS=0.000;HRun=16;HaplotypeScore=58.6248;InbreedingCoeff=0.6425;MQ=63.19;MQ0=4;MQRankSum=0.025;QD=7.92;ReadPosRankSum=1.971;VQSLOD=0.1889;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,17:25:1.29:243,1,0	0/1:4,0:4:2.78:3,0,70	0/0:17,0:6:2.20:0,2,41	0/0:14,0:6:5.96:0,6,44	0/0:15,0:14:26.47:0,26,271	1/1:4,7:11:20.69:175,21,0	1/1:7,9:17:19.98:177,20,0	1/1:8,1:26:29.32:167,29,0	0/0:6,0:6:2.80:0,3,13	1/1:7,6:14:18.65:129,19,0	0/1:2,4:6:24.31:85,0,24	1/1:14,0:14:22.51:130,23,0	1/1:5,9:14:20.82:160,21,0	1/1:8,2:10:12.94:88,13,0	0/0:12,0:12:26.53:0,27,282	0/0:10,0:10:26.72:0,27,242	0/0:25,0:26:58.97:0,59,573	1/1:6,9:19:2.17:134,2,0	1/1:15,0:19:26.32:106,26,0	1/1:3,0:14:15.72:65,16,0	1/1:0,0:4:5.49:24,5,0	0/0:9,0:10:24.52:0,25,280	1/1:2,6:9:2.91:66,3,0	1/1:7,10:18:26.66:211,27,0	1/1:7,11:18:32.30:249,32,0	1/1:7,1:13:21.37:100,21,0	1/1:1,1:10:8.24:48,8,0	1/1:6,0:14:3.18:54,3,0
chr10	39026587	.	ACTT	A	10349.99	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=15.379;DP=652;FS=8.405;HRun=0;HaplotypeScore=95.2931;InbreedingCoeff=0.9873;MQ=66.47;MQ0=0;MQRankSum=-7.347;QD=39.50;ReadPosRankSum=-1.007;VQSLOD=5.3737;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,102,2208	0/0:7,0:7:21.07:0,21,454	0/0:19,0:18:50.34:0,50,959	0/0:19,0:18:44.20:0,44,860	0/0:25,0:25:72.25:0,72,1600	1/1:1,20:21:54.14:853,54,0	1/1:1,21:22:60.20:980,60,0	1/1:5,29:33:87.27:1365,87,0	0/0:20,0:20:60.21:0,60,1341	0/0:29,0:29:87.30:0,87,1900	0/0:27,0:27:78.27:0,78,1735	0/0:33,0:33:93.32:0,93,2064	1/1:2,25:27:69.24:1127,69,0	1/1:0,22:22:57.19:931,57,0	0/0:28,0:28:78.27:0,78,1742	0/0:26,0:26:72.25:0,72,1602	0/0:28,0:28:78.27:0,78,1721	0/0:14,0:14:42.14:0,42,920	1/1:4,22:25:63.20:1003,63,0	1/1:0,20:20:48.12:754,48,0	1/1:4,25:29:54.18:882,54,0	0/0:19,0:19:48.16:0,48,1072	0/0:20,0:20:57.20:0,57,1263	0/0:20,0:20:60.21:0,60,1325	0/0:19,0:19:51.17:0,51,1140	1/1:3,25:28:8.21:1084,8,0	1/1:1,25:26:69.24:1127,69,0	1/1:1,6:7:15.05:245,15,0
chr10	39027810	.	AT	A	869.17	PASS	AB=1.000;AC=10;AF=0.179;AN=56;BaseQRankSum=4.599;DP=460;FS=2.820;HRun=2;HaplotypeScore=43.1653;InbreedingCoeff=0.7442;MQ=61.33;MQ0=31;MQRankSum=1.527;QD=5.87;ReadPosRankSum=-0.736;VQSLOD=0.4785;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:26:53:387,53,0	0/0:4,0:4:8.99:0,9,76	0/1:35,0:8:12.67:13,0,61	0/1:41,0:17:1.68:2,0,112	0/0:19,0:19:41.94:0,42,353	0/0:19,0:19:47.72:0,48,397	0/0:9,0:9:26.96:0,27,225	0/0:38,0:37:74.82:0,75,634	0/0:8,0:7:20.98:0,21,179	1/1:5,15:19:41.51:315,42,0	1/1:0,8:9:17.18:97,17,0	0/0:15,0:14:38.82:0,39,320	0/0:11,0:11:23.99:0,24,207	0/0:9,0:9:11.88:0,12,90	0/0:15,0:13:29.97:0,30,258	0/0:12,0:11:29.81:0,30,240	0/0:15,0:15:35.91:0,36,291	1/1:14,0:14:29.48:218,29,0	0/0:15,0:12:26.81:0,27,210	0/0:19,0:18:44.62:0,45,347	0/0:8,0:8:11.97:0,12,98	0/0:8,0:8:23.96:0,24,198	0/0:8,0:7:17.93:0,18,145	0/0:13,0:13:35.83:0,36,280	0/0:13,0:12:32.72:0,33,260	0/0:21,0:21:4.21:0,4,203	0/0:17,0:16:29.78:0,30,230	0/0:16,0:11:32.87:0,33,258
chr10	39028170	.	AC	A	441.57	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.925;DP=630;FS=0.000;HRun=4;HaplotypeScore=64.2014;InbreedingCoeff=0.9841;MQ=83.82;MQ0=0;MQRankSum=-2.644;QD=29.44;ReadPosRankSum=0.546;VQSLOD=3.4928;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,105,1400	0/0:8,0:8:15.05:0,15,210	0/0:26,0:26:69.08:0,69,879	0/0:34,0:34:86.12:0,86,1119	0/0:26,0:26:75.18:0,75,1023	0/0:15,0:15:45.12:0,45,596	0/0:26,0:26:75.25:0,75,1049	0/0:29,0:29:72.21:0,72,948	0/0:29,0:29:87.20:0,87,1182	0/0:23,0:23:60.18:0,60,806	0/0:13,0:13:36.12:0,36,503	0/0:26,0:26:78.24:0,78,1047	0/0:21,0:21:63.21:0,63,880	0/0:20,0:20:54.14:0,54,705	0/0:17,0:17:51.08:0,51,687	0/0:23,0:23:60.20:0,60,831	0/0:17,0:17:51.17:0,51,707	0/0:12,0:12:36.12:0,36,504	0/0:19,0:19:51.14:0,51,679	0/0:21,0:21:63.20:0,63,863	0/0:27,0:27:81.27:0,81,1132	0/0:26,0:26:75.25:0,75,1036	0/0:13,0:13:39.12:0,39,529	0/0:43,0:43:99:0,123,1702	1/1:0,15:15:45.14:536,45,0	0/0:24,0:24:72.23:0,72,993	0/0:23,0:23:63.20:0,63,862	0/0:15,0:15:45.15:0,45,628
chr10	39028340	.	AGAGCTGGCTGCCAGGTTCTCCCAGC	A	10403.19	PASS	AC=22;AF=0.407;AN=54;BaseQRankSum=11.647;DP=544;FS=3.466;HRun=0;HaplotypeScore=338.2909;InbreedingCoeff=0.9325;MQ=74.71;MQ0=0;MQRankSum=-8.039;QD=55.04;ReadPosRankSum=1.523;VQSLOD=3.3714;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:29,6:35:15.05:974,15,0	1/1:4,7:11:21.07:1193,21,0	0/0:16,0:16:21.07:0,21,960	0/0:14,0:14:6.02:0,6,445	1/1:8,5:13:9.03:587,9,0	0/0:21,0:21:45.15:0,45,4475	0/0:23,0:23:57.18:0,57,5206	0/0:27,0:27:36.12:0,36,2580	1/1:5,8:13:24.08:1564,24,0	1/1:11,8:19:24.08:904,24,0	1/1:6,6:12:18.06:1007,18,0	0/0:21,0:21:42.14:0,42,4346	0/0:22,0:22:33.11:0,33,3598	0/0:21,0:21:39.13:0,39,3874	1/1:6,11:17:18.06:1173,18,0	1/1:10,10:20:18.06:1173,18,0	1/1:15,5:20:3.01:196,3,0	1/1:11,6:17:12.04:782,12,0	0/0:19,0:19:27.09:0,27,2254	0/0:13,0:13:21.03:0,21,1675	0/0:51,0:51:90.27:0,90,8236	1/1:4,8:12:15.05:850,15,0	0/0:16,0:16:18.02:0,18,1334	0/0:27,0:27:45.15:0,45,4154	./.	0/0:18,0:18:33.11:0,33,3009	0/0:32,0:32:60.21:0,60,6175	0/0:7,0:7:18.06:0,18,2053
chr10	39028723	.	TC	T	1737.55	PASS	AB=1.000;AC=26;AF=0.500;AN=52;BaseQRankSum=-1.402;DP=367;FS=22.884;HRun=10;HaplotypeScore=54.5894;InbreedingCoeff=0.7887;MQ=80.86;MQ0=3;MQRankSum=-0.461;QD=8.48;ReadPosRankSum=3.606;VQSLOD=0.4604;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:8.96:0,9,70	./.	0/0:31,1:12:27.06:0,27,279	0/0:35,2:25:32.37:0,32,303	0/1:12,0:12:3.75:4,0,27	1/1:10,0:21:20.36:60,20,0	1/1:6,0:16:14.25:42,14,0	1/1:15,12:27:35.92:305,36,0	0/0:5,0:5:5.97:0,6,51	./.	0/1:6,0:6:0:0,0,0	0/0:8,0:8:9:0,9,83	1/1:6,0:15:25.78:74,26,0	1/1:3,0:13:24:70,24,0	0/0:8,0:8:9.48:0,9,51	0/0:9,0:9:9.19:0,9,33	0/0:9,0:9:14.14:0,14,77	0/0:7,0:7:9.42:0,9,74	1/1:5,8:13:26.95:228,27,0	1/1:6,7:13:17.98:156,18,0	1/1:6,12:16:29.99:259,30,0	0/0:3,0:3:2.04:0,2,6	0/0:8,0:8:3.01:0,3,33	0/0:13,0:13:24.06:0,24,262	1/1:8,0:8:6.78:19,7,0	1/1:10,11:21:35.94:303,36,0	1/1:5,6:11:26.97:230,27,0	1/1:4,7:11:20.97:182,21,0
chr10	39028733	.	CTCT	C	851.20	PASS	AB=0.885;AC=16;AF=0.296;AN=54;BaseQRankSum=1.267;DP=339;FS=2.465;HRun=0;HaplotypeScore=66.3450;InbreedingCoeff=0.7018;MQ=77.72;MQ0=8;MQRankSum=-4.787;QD=14.93;ReadPosRankSum=-0.401;VQSLOD=2.8882;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,0:6:4.41:14,4,0	1/1:2,1:3:6.02:87,6,0	0/0:43,0:17:34.42:0,34,670	0/0:44,0:22:33.85:0,34,631	1/1:5,1:7:5.90:79,6,0	0/0:18,0:18:47.67:0,48,537	0/0:14,0:14:32.92:0,33,392	0/0:19,0:19:44.67:0,45,660	./.	0/1:8,0:8:13.92:14,0,15	0/0:5,0:5:2.63:0,3,23	0/0:7,0:7:8.98:0,9,83	0/0:14,0:15:40.33:0,40,296	0/0:12,0:12:34.88:0,35,282	1/1:4,4:7:12.04:196,12,0	1/1:0,4:6:15.05:248,15,0	1/1:3,4:6:15.05:250,15,0	0/0:2,0:2:3.01:0,3,39	0/0:13,0:14:32.04:0,32,414	0/0:9,0:9:21.07:0,21,292	0/0:17,0:16:42.10:0,42,627	1/1:1,1:2:5.61:63,6,0	0/0:4,0:4:8.94:0,9,77	0/0:10,0:10:27.06:0,27,532	0/1:7,3:10:0.66:77,0,1	0/0:20,0:20:47.28:0,47,583	0/0:11,0:11:33.09:0,33,434	0/0:11,0:11:26.78:0,27,440
chr10	39028742	.	C	CT	565.95	PASS	AB=0.860;AC=15;AF=0.268;AN=56;BaseQRankSum=-0.385;DP=403;FS=3.886;HRun=13;HaplotypeScore=71.5205;InbreedingCoeff=0.3005;MQ=75.79;MQ0=8;MQRankSum=-2.474;QD=5.15;ReadPosRankSum=-2.102;VQSLOD=1.8806;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:8:16.89:0,17,107	1/1:0,3:4:11.85:97,12,0	0/0:47,0:19:18.46:0,18,94	0/0:39,0:19:9.60:0,10,38	0/1:3,4:8:5.63:86,0,6	0/0:20,0:21:11.10:0,11,174	0/1:8,1:11:5.95:6,0,93	0/0:12,0:14:20.34:0,20,108	0/1:7,1:8:11.21:16,0,11	0/0:15,0:15:38.65:0,39,266	0/0:10,0:12:27.83:0,28,175	0/1:6,0:6:3.59:4,0,66	0/0:18,0:18:10.92:0,11,217	0/0:14,0:14:23.69:0,24,164	1/1:2,11:12:18.02:167,18,0	0/1:8,3:11:5.59:119,0,6	0/1:6,5:10:0.24:117,0,0	0/0:4,0:4:8.91:0,9,62	0/1:12,1:14:23.57:24,0,135	0/0:10,0:11:13.82:0,14,87	0/0:20,0:19:8.78:0,9,180	0/1:3,0:3:2.68:22,0,3	0/0:6,0:6:14.87:0,15,103	0/0:13,0:13:20.72:0,21,144	1/1:11,0:11:11.20:53,11,0	0/0:24,0:25:40.49:0,40,267	0/0:19,0:22:4.16:0,4,212	0/1:9,1:10:19.94:20,0,32
chr10	39028755	.	T	TTTTA	187.31	PASS	AB=0.971;AC=3;AF=0.054;AN=56;BaseQRankSum=3.926;DP=375;FS=1.266;HRun=0;HaplotypeScore=83.9103;InbreedingCoeff=0.4219;MQ=79.52;MQ0=7;MQRankSum=-0.867;QD=4.57;ReadPosRankSum=-1.431;VQSLOD=1.7968;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:7:21.05:0,21,308	0/0:4,0:4:5.63:0,6,38	0/0:32,0:18:3.33:0,3,204	0/1:31,0:16:18.29:18,0,81	0/0:9,0:9:26.55:0,27,207	0/0:20,0:20:23.98:0,24,598	0/0:11,0:11:29.88:0,30,385	0/0:13,0:13:36.08:0,36,450	0/0:8,0:8:14.87:0,15,154	0/0:19,0:19:57.15:0,57,813	0/0:11,0:11:33.03:0,33,460	0/0:8,0:8:21.01:0,21,254	0/0:18,0:18:41.86:0,42,566	0/0:11,0:11:26.93:0,27,420	0/0:13,0:12:23.32:0,23,140	0/0:11,0:11:28.22:0,28,217	0/0:10,0:9:3.28:0,3,156	0/0:3,0:3:9.03:0,9,150	0/0:14,0:14:35.86:0,36,464	0/0:7,0:7:17.86:0,18,237	0/0:19,0:17:17.90:0,18,530	0/0:4,0:4:11.90:0,12,112	0/0:7,0:7:21.03:0,21,294	0/0:12,0:12:32.88:0,33,401	1/1:0,6:7:12.04:267,12,0	0/0:24,0:24:65.86:0,66,856	0/0:28,0:28:73.90:0,74,852	0/0:9,0:9:22.90:0,23,227
chr10	39030416	.	A	AT	337.41	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-4.041;DP=307;FS=8.697;HRun=9;HaplotypeScore=52.3710;InbreedingCoeff=0.8670;MQ=67.71;MQ0=1;MQRankSum=-1.155;QD=18.74;ReadPosRankSum=1.978;VQSLOD=3.6753;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:25.98:0,26,249	0/0:4,0:4:9:0,9,78	0/0:11,0:7:14.20:0,14,108	0/0:16,0:11:17.46:0,17,145	0/0:12,0:12:29.74:0,30,238	0/0:11,0:11:32.70:0,33,256	0/0:6,0:6:14.88:0,15,120	0/0:25,0:25:62.97:0,63,546	0/0:10,0:10:24:0,24,209	0/0:10,0:10:29.79:0,30,248	0/0:10,0:11:29.87:0,30,250	1/1:0,7:7:21.06:232,21,0	0/0:5,0:5:14.99:0,15,129	0/0:7,0:7:14.92:0,15,121	0/0:10,0:10:29.70:0,30,229	0/0:8,0:8:17.99:0,18,156	0/0:19,0:19:47.86:0,48,407	0/0:25,0:25:62.71:0,63,518	0/0:15,0:16:41.01:0,41,344	0/0:10,0:10:26.99:0,27,234	0/0:6,0:6:18:0,18,156	0/0:8,0:8:11.82:0,12,93	1/1:0,5:5:12.03:133,12,0	1/1:2,4:6:11.06:106,11,0	0/0:9,0:9:23.90:0,24,199	0/0:8,0:8:23.95:0,24,201	0/0:14,0:14:38.97:0,39,335	0/0:13,0:13:4.79:0,5,243
chr10	39031474	.	T	TTA	30402.35	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-10.146;DP=653;FS=1.924;HRun=0;HaplotypeScore=62.6060;InbreedingCoeff=0.9978;MQ=91.16;MQ0=3;MQRankSum=-11.147;QD=50.59;ReadPosRankSum=6.054;VQSLOD=5.8945;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,30:32:75.26:1448,75,0	1/1:0,10:10:21.07:406,21,0	0/0:32,0:32:84.26:0,84,1196	0/0:20,0:20:51.14:0,51,734	1/1:0,32:32:87.30:1680,87,0	1/1:1,22:23:60.21:1159,60,0	1/1:0,18:18:45.15:869,45,0	1/1:3,19:23:69.20:1235,69,0	1/1:1,24:26:66.23:1275,66,0	1/1:1,20:22:63.22:1201,63,0	1/1:0,20:21:60.21:1158,60,0	1/1:0,21:21:63.22:1217,63,0	1/1:1,22:23:57.20:1101,57,0	1/1:0,25:25:69.24:1332,69,0	1/1:1,31:33:87.30:1660,87,0	1/1:0,26:26:72.25:1391,72,0	1/1:0,29:29:81.28:1564,81,0	1/1:0,18:17:48.16:927,48,0	1/1:0,14:17:51.08:820,51,0	1/1:2,18:20:51.17:963,51,0	1/1:2,23:26:66.23:1274,66,0	1/1:0,13:13:39.13:753,39,0	1/1:0,17:18:48.16:919,48,0	1/1:0,24:24:66.23:1275,66,0	1/1:0,18:20:51.17:985,51,0	1/1:0,20:20:60.17:1071,60,0	1/1:3,40:44:99:1966,102,0	1/1:0,15:15:39.13:753,39,0
chr10	39032201	.	CT	C	1050.23	PASS	AB=0.838;AC=20;AF=0.357;AN=56;BaseQRankSum=2.707;DP=584;FS=6.149;HRun=16;HaplotypeScore=88.2413;InbreedingCoeff=0.0832;MQ=72.30;MQ0=1;MQRankSum=4.255;QD=2.98;ReadPosRankSum=4.154;VQSLOD=0.0918;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:24,11:35:40.85:198,0,41	0/1:2,0:9:5.32:6,0,5	0/1:21,0:16:0.57:1,0,50	0/1:9,1:9:7.89:17,0,8	0/0:21,0:23:42.84:0,43,251	0/1:14,9:26:3.93:116,0,4	0/1:9,7:16:48.79:66,0,49	0/0:25,2:29:8.85:0,9,248	0/0:8,0:17:26.45:0,26,162	1/1:15,11:29:11.90:156,12,0	1/1:13,4:21:28.46:151,28,0	0/1:16,5:21:3.85:72,0,4	0/1:18,3:21:22.05:73,0,22	0/1:12,4:16:4.15:64,0,4	0/0:22,0:22:51.72:0,52,290	0/0:10,0:25:26.28:0,26,157	0/0:9,0:17:8.72:0,9,40	0/1:12,4:18:46.48:56,0,46	0/0:18,0:19:7.20:0,7,166	0/0:19,3:22:6.26:0,6,240	0/1:19,0:21:0.42:0,0,127	0/0:11,0:16:15.05:0,15,90	0/1:11,4:15:26.71:74,0,27	1/1:15,10:25:9.92:158,10,0	0/0:11,1:12:8.10:0,8,138	0/1:21,2:24:1.10:1,0,214	0/1:17,3:24:1.39:1,0,295	0/0:21,2:25:32.37:0,32,448
chr10	39032466	.	TA	T	1637.17	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=9.849;DP=401;FS=8.251;HRun=6;HaplotypeScore=37.0915;InbreedingCoeff=0.9542;MQ=59.13;MQ0=4;MQRankSum=-6.445;QD=21.83;ReadPosRankSum=-2.442;VQSLOD=1.5658;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:39.13:0,39,513	1/1:2,3:5:9.02:97,9,0	0/0:10,0:5:15.05:0,15,196	0/0:13,0:8:24.01:0,24,274	1/1:0,9:9:21.05:224,21,0	0/0:15,0:15:42.14:0,42,552	0/0:9,0:9:27.09:0,27,353	0/0:34,0:34:82.51:0,83,1068	1/1:2,7:9:21.05:225,21,0	0/0:19,0:19:54.17:0,54,699	0/0:21,0:20:60.19:0,60,787	0/0:6,0:6:15.05:0,15,197	0/0:15,0:15:39.13:0,39,512	0/0:12,0:12:33.11:0,33,432	1/1:3,7:10:21.05:225,21,0	1/1:2,9:10:24.06:258,24,0	1/1:4,8:12:26.14:265,26,0	0/0:16,0:16:45.13:0,45,576	0/0:14,0:14:42.13:0,42,537	0/0:21,0:21:54.18:0,54,710	0/0:3,0:3:9.02:0,9,104	1/1:0,2:2:6.01:63,6,0	0/0:15,0:15:39.13:0,39,513	0/0:11,0:11:33.11:0,33,433	1/1:2,15:17:45.11:481,45,0	0/0:26,0:26:72.23:0,72,947	0/0:26,0:26:72.23:0,72,946	0/0:24,0:23:69.18:0,69,883
chr10	39032900	.	AACACACACAC	A	1179.28	PASS	AB=0.762;AC=9;AF=0.173;AN=52;BaseQRankSum=1.133;DP=681;FS=0.986;HRun=0;HaplotypeScore=194.6001;InbreedingCoeff=0.6764;MQ=65.68;MQ0=3;MQRankSum=-5.046;QD=10.82;ReadPosRankSum=-0.283;VQSLOD=2.5535;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:39:2.89:0,3,196	0/0:8,0:8:5.16:0,5,249	./.	./.	0/0:20,0:20:6.49:0,6,199	1/1:16,11:27:1.27:171,1,0	1/1:15,11:27:12.04:337,12,0	0/0:35,0:35:15.05:0,15,196	0/0:26,0:26:36.12:0,36,1077	0/0:13,0:18:11.56:0,12,79	0/1:11,1:15:4.79:84,0,5	0/0:25,0:25:21.54:0,22,985	1/1:12,5:17:8.88:194,9,0	1/1:12,10:22:18.06:535,18,0	0/0:18,0:33:20.97:0,21,704	0/0:22,0:29:9.01:0,9,280	0/0:17,0:34:39.09:0,39,1344	0/0:16,0:18:26.11:0,26,280	0/0:13,0:15:16.30:0,16,442	0/0:17,0:24:14.19:0,14,314	0/0:26,0:33:24.08:0,24,672	0/0:26,0:26:12.04:0,12,342	0/0:19,0:18:15.03:0,15,432	0/0:29,0:42:14.76:0,15,340	0/0:20,0:19:18.06:0,18,648	0/0:11,0:14:26.41:0,26,358	0/0:17,0:27:43.03:0,43,1101	0/0:12,0:17:14.79:0,15,434
chr10	39033959	.	AGTGTGTGT	A	4370.29	PASS	AB=0.998;AC=33;AF=0.589;AN=56;BaseQRankSum=-0.984;DP=750;FS=3.250;HRun=0;HaplotypeScore=257.1032;InbreedingCoeff=-0.1026;MQ=58.33;MQ0=14;MQRankSum=-8.195;QD=6.95;ReadPosRankSum=3.131;VQSLOD=3.3995;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:13,27:40:22.89:510,23,0	0/1:9,0:9:6.97:7,0,29	0/0:43,0:18:12.32:0,12,98	0/0:46,0:16:18.99:0,19,231	0/0:23,0:23:12.08:0,12,126	0/1:20,0:20:24.89:25,0,636	0/1:28,0:29:77.50:77,0,586	0/1:38,0:38:99:460,0,131	0/1:22,0:23:16.85:147,0,17	1/1:8,22:29:60.09:1225,60,0	1/1:3,9:12:11.87:109,12,0	1/1:25,0:25:19.48:328,19,0	0/1:36,0:36:62.84:63,0,1443	0/1:21,0:21:96.40:96,0,739	1/1:27,0:27:3.63:64,4,0	0/1:30,0:30:8.51:57,0,9	0/1:20,0:20:4.25:4,0,33	1/1:13,9:22:9.03:194,9,0	0/1:28,0:28:44.89:45,0,558	0/1:26,0:26:98.86:99,0,951	0/1:60,0:59:70.46:70,0,2385	0/1:17,0:20:54.43:54,0,71	1/1:16,0:16:17.72:154,18,0	1/1:24,0:24:26.99:237,27,0	1/1:3,0:12:17.39:93,17,0	0/1:32,1:32:99:222,0,655	0/1:27,0:27:28.55:29,0,1316	0/0:9,0:9:21.05:0,21,471
chr10	39033966	.	G	GTT	881.29	PASS	AB=1.000;AC=10;AF=0.179;AN=56;BaseQRankSum=4.925;DP=747;FS=3.109;HRun=1;HaplotypeScore=207.5671;InbreedingCoeff=0.5233;MQ=55.28;MQ0=17;MQRankSum=-7.621;QD=5.58;ReadPosRankSum=2.931;VQSLOD=0.0131;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:41.31:0,41,298	0/0:9,0:9:24.01:0,24,245	0/0:43,0:15:29.26:0,29,299	0/0:49,0:14:36.52:0,37,354	0/1:25,0:25:53.03:53,0,139	0/0:21,0:21:51.04:0,51,621	0/0:31,0:30:84.09:0,84,1009	0/0:35,0:35:99:0,104,1158	0/1:25,0:25:4.82:5,0,318	0/0:28,0:27:68.04:0,68,551	0/0:12,0:12:14.88:0,15,148	1/1:19,2:21:38.10:359,38,0	0/0:39,0:39:99:0,108,1345	0/0:24,0:24:68.98:0,69,807	0/1:26,0:26:24.78:25,0,312	0/0:30,0:30:25.47:0,25,377	0/1:20,0:20:11.77:12,0,92	0/0:17,0:17:26.32:0,26,204	0/0:21,0:20:57.02:0,57,704	0/0:27,0:27:75.11:0,75,987	0/0:62,0:60:99:0,164,2180	0/0:20,0:20:23.45:0,23,300	1/1:11,6:17:13.70:169,14,0	1/1:20,4:24:47.59:418,48,0	0/0:12,0:10:11.95:0,12,109	0/0:31,0:30:81.89:0,82,1021	0/0:33,0:33:92.92:0,93,1148	0/0:8,0:8:21.04:0,21,296
chr10	39033969	.	TGTGTG	T	1957.69	PASS	AB=1.000;AC=16;AF=0.286;AN=56;BaseQRankSum=12.820;DP=762;FS=21.861;HRun=0;HaplotypeScore=239.2302;InbreedingCoeff=0.0814;MQ=53.41;MQ0=17;MQRankSum=-13.009;QD=6.42;ReadPosRankSum=6.981;VQSLOD=0.9400;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:45,0:45:99:112,0,372	0/1:9,0:9:31.42:31,0,155	0/0:42,0:14:37.58:0,38,479	0/0:50,0:15:43.68:0,44,685	0/1:23,0:23:1.08:1,0,215	0/0:21,0:21:51.14:0,51,1029	0/0:31,0:30:81.23:0,81,1425	0/0:34,0:34:99:0,101,1154	0/1:26,0:26:86.80:87,0,241	0/1:30,0:29:99:297,0,336	0/0:14,0:14:14.57:0,15,126	1/1:10,13:23:3.79:555,4,0	0/0:38,0:38:99:0,108,2226	0/0:24,0:24:69.17:0,69,1355	0/1:27,0:27:96.16:96,0,157	0/1:32,0:32:52.47:175,0,52	0/1:20,0:20:19.68:20,0,41	0/1:18,0:18:28.68:29,0,205	0/0:21,0:20:60.14:0,60,1011	0/0:28,0:28:75.14:0,75,1437	0/0:60,0:58:99:0,163,3537	0/0:18,0:18:2.84:0,3,366	1/1:9,7:16:16.85:235,17,0	1/1:14,10:24:11.17:361,11,0	0/1:12,0:10:27:125,0,27	0/0:31,0:30:62.36:0,62,1356	0/0:36,0:36:99:0,102,2147	0/0:9,0:9:20.31:0,20,525
chr10	39033980	.	GTGTGTGTC	G	2939.42	PASS	AB=1.000;AC=22;AF=0.393;AN=56;BaseQRankSum=7.080;DP=763;FS=11.522;HRun=0;HaplotypeScore=277.5058;InbreedingCoeff=0.2687;MQ=51.91;MQ0=17;MQRankSum=-10.924;QD=7.82;ReadPosRankSum=6.251;VQSLOD=0.7984;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:46,0:46:99:330,0,162	1/1:9,1:10:20.89:158,21,0	0/0:42,0:14:14.94:0,15,249	0/0:47,0:16:12.90:0,13,417	1/1:23,0:23:5.72:40,6,0	0/0:22,0:22:50.86:0,51,990	0/0:28,0:27:58.17:0,58,1061	0/0:31,0:31:42.04:0,42,638	1/1:24,2:26:56.83:557,57,0	0/1:30,0:30:99:714,0,141	0/1:13,0:13:15.09:31,0,15	0/1:27,0:27:84.91:85,0,147	0/0:38,0:38:91.91:0,92,2168	0/0:24,0:24:48.01:0,48,1173	1/1:25,0:25:41.77:342,42,0	1/1:34,0:34:56.69:423,57,0	0/1:22,0:22:3.90:51,0,4	0/1:16,0:16:58.06:113,0,58	0/0:20,0:19:44.64:0,45,961	0/0:26,0:26:49.98:0,50,1481	0/0:65,0:64:99:0,148,3997	1/1:13,2:15:17.94:193,18,0	0/1:14,0:14:18.75:19,0,75	0/1:29,0:29:47.91:48,0,60	0/1:18,0:16:20.91:21,0,173	0/1:28,0:27:5.52:6,0,1142	0/0:33,0:33:87.55:0,88,2317	0/0:10,0:10:26.32:0,26,683
chr10	39033982	.	GTGTGTC	G	5841.49	PASS	AB=0.909;AC=18;AF=0.321;AN=56;BaseQRankSum=-1.326;DP=768;FS=13.440;HRun=0;HaplotypeScore=245.4213;InbreedingCoeff=0.1678;MQ=52.29;MQ0=17;MQRankSum=-11.162;QD=17.39;ReadPosRankSum=7.252;VQSLOD=2.5610;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:47,0:47:99:105,0,176	0/1:5,5:10:20.69:342,0,21	0/0:42,0:15:27.65:0,28,289	0/0:46,0:17:13.86:0,14,434	0/1:3,18:21:18.63:211,0,19	0/0:23,0:23:56.80:0,57,952	0/0:31,0:30:82.06:0,82,1253	0/0:29,0:29:60.70:0,61,949	1/1:14,13:27:66.10:1059,66,0	0/1:30,0:30:99:223,0,258	0/0:13,0:13:8.67:0,9,53	0/1:26,0:26:99:537,0,140	0/0:37,0:37:99:0,105,1945	0/0:24,0:24:62.81:0,63,1119	1/1:4,23:27:34.05:828,34,0	1/1:2,32:34:57.20:1301,57,0	1/1:3,19:22:11.71:212,12,0	0/1:16,0:16:24.36:24,0,73	0/0:20,0:19:56.31:0,56,876	0/0:26,0:26:68.36:0,68,1372	0/0:67,0:65:99:0,172,3510	0/1:13,2:15:30.25:227,0,30	0/1:14,0:14:66.98:205,0,67	0/1:29,0:29:50.87:335,0,51	0/1:18,0:16:99:232,0,165	0/0:29,0:28:49.30:0,49,1207	0/0:34,0:34:96.98:0,97,1942	0/0:10,0:10:26.33:0,26,558
chr10	39034288	.	GGGGT	G	1151.35	PASS	AB=1.000;AC=8;AF=0.143;AN=56;BaseQRankSum=1.228;DP=561;FS=3.248;HRun=0;HaplotypeScore=100.0126;InbreedingCoeff=0.3701;MQ=72.35;MQ0=9;MQRankSum=0.951;QD=8.93;ReadPosRankSum=3.266;VQSLOD=1.9508;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:96.06:0,96,1363	0/0:11,0:10:20.98:0,21,258	0/0:27,0:17:42.30:0,42,424	0/0:34,0:22:55.50:0,56,454	0/0:15,0:14:30.01:0,30,335	1/1:18,4:22:59.41:599,59,0	1/1:0,18:19:5.86:117,6,0	0/0:27,0:27:76.06:0,76,711	0/0:15,0:14:30.03:0,30,314	0/0:18,0:18:47.63:0,48,593	0/0:14,0:14:36.02:0,36,485	0/1:24,0:24:77.39:220,0,77	0/1:23,0:23:29.47:29,0,311	0/0:20,0:20:21.44:0,21,390	0/0:16,0:16:26.78:0,27,345	0/0:17,0:17:30.51:0,31,382	0/0:23,0:22:59.97:0,60,807	0/0:27,0:27:68.67:0,69,923	0/0:18,0:17:46.02:0,46,451	0/0:12,0:12:30:0,30,316	0/0:33,0:33:62.90:0,63,603	0/0:12,0:11:23.98:0,24,289	0/1:12,0:12:64.64:103,0,65	0/1:29,0:28:99:224,0,198	0/0:9,0:8:23.98:0,24,409	0/0:28,0:27:78.06:0,78,962	0/0:10,0:10:21.01:0,21,221	0/0:11,0:11:33.02:0,33,499
chr10	39034290	.	G	GGTGT	2228.68	PASS	AB=0.911;AC=29;AF=0.558;AN=52;BaseQRankSum=-1.227;DP=612;FS=5.944;HRun=0;HaplotypeScore=129.1616;InbreedingCoeff=0.3276;MQ=68.05;MQ0=11;MQRankSum=-3.552;QD=5.69;ReadPosRankSum=0.748;VQSLOD=1.6566;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:37,0:37:8.90:9,0,307	0/1:10,0:9:18.90:19,0,40	./.	./.	1/1:15,0:15:6:86,6,0	0/0:23,0:23:12.01:0,12,111	0/0:20,0:20:5.56:0,6,55	0/1:30,0:28:9.14:44,0,9	1/1:11,5:16:9.03:187,9,0	0/0:20,0:20:11.49:0,11,122	0/0:16,0:16:11.51:0,12,129	1/1:22,0:25:12.34:96,12,0	0/0:14,0:22:8.92:0,9,84	0/0:21,0:21:3.86:0,4,11	0/1:11,7:18:15.63:122,0,16	1/1:9,8:20:9.24:153,9,0	1/1:26,2:27:23.02:283,23,0	0/0:22,0:27:26.52:0,27,262	1/1:16,3:18:10.83:170,11,0	0/1:12,0:17:6.41:6,0,22	1/1:27,8:39:5.69:83,6,0	1/1:11,4:16:3.01:70,3,0	1/1:13,0:14:5.96:74,6,0	1/1:25,0:29:27.04:476,27,0	0/0:12,0:11:8.05:0,8,129	0/1:30,0:30:16.67:242,0,17	1/1:11,2:13:8.90:202,9,0	0/1:10,0:11:5.14:81,0,5
chr10	39036243	.	A	ATCTG	13531.72	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-13.375;DP=668;FS=2.488;HRun=0;HaplotypeScore=98.5650;InbreedingCoeff=0.9888;MQ=76.73;MQ0=2;MQRankSum=-3.329;QD=46.03;ReadPosRankSum=3.464;VQSLOD=5.4940;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:11,39:53:72.08:2203,72,0	0/0:5,0:5:14.84:0,15,186	0/0:18,0:17:10.34:0,10,255	0/0:27,0:27:33.11:0,33,559	0/0:27,0:27:69.24:0,69,1166	1/1:4,19:24:48.16:1192,48,0	1/1:5,21:27:45.15:1123,45,0	0/0:30,0:30:51.15:0,51,793	0/0:27,0:27:63.22:0,63,1069	1/1:8,24:31:69.23:1613,69,0	1/1:6,8:13:21.07:524,21,0	1/1:2,22:23:60.21:1497,60,0	1/1:4,17:22:48.16:1192,48,0	1/1:6,9:15:24.08:593,24,0	0/0:30,0:29:90.29:0,90,1498	0/0:23,0:23:60.17:0,60,988	0/0:38,0:38:87.28:0,87,1432	1/1:5,18:23:45.15:1124,45,0	0/0:30,0:30:51.14:0,51,769	0/0:11,0:11:27.08:0,27,431	0/0:14,0:14:36.09:0,36,556	0/0:14,0:14:39.13:0,39,662	1/1:2,10:13:24.08:598,24,0	1/1:6,19:25:42.14:1048,42,0	1/1:5,14:20:33.11:824,33,0	0/0:33,1:34:18.36:0,18,1449	0/0:36,0:36:90.29:0,90,1477	0/0:10,0:10:24.08:0,24,407
chr10	39036405	.	TTTTTTTTG	T	1549.58	PASS	AB=0.579;AC=13;AF=0.241;AN=54;BaseQRankSum=6.310;DP=522;FS=1.715;HRun=0;HaplotypeScore=126.6752;InbreedingCoeff=0.8017;MQ=65.59;MQ0=4;MQRankSum=-7.117;QD=16.66;ReadPosRankSum=-0.697;VQSLOD=2.8796;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:51.17:0,51,1729	0/0:4,0:4:9.03:0,9,360	./.	0/0:30,0:16:5.45:0,5,25	0/0:27,0:27:48.15:0,48,1466	1/1:3,8:11:9.03:215,9,0	1/1:7,2:9:6.02:144,6,0	0/0:32,0:31:44.99:0,45,691	0/0:13,0:13:15.04:0,15,507	0/0:21,0:21:42.13:0,42,1252	0/0:14,0:13:24.07:0,24,758	1/1:11,10:21:15.05:359,15,0	1/1:6,9:15:12.04:287,12,0	1/1:7,8:15:15.52:362,16,0	0/0:17,0:17:27.09:0,27,943	0/0:14,0:13:24.01:0,24,649	0/0:32,0:32:51.63:0,52,1669	0/0:19,0:19:36.11:0,36,1138	0/0:23,0:22:30.09:0,30,984	0/0:17,0:17:42.12:0,42,1185	0/0:15,0:14:27.06:0,27,787	0/0:9,0:9:24.05:0,24,553	0/1:3,8:11:73.68:200,0,74	1/1:11,0:9:8.21:155,8,0	0/0:13,0:13:36.12:0,36,1278	0/0:22,0:22:39.12:0,39,1310	0/0:36,0:35:66.21:0,66,2325	0/0:18,0:18:45.15:0,45,1800
chr10	39036437	.	G	GGT	165.87	PASS	AB=0.956;AC=6;AF=0.107;AN=56;BaseQRankSum=3.374;DP=505;FS=0.000;HRun=0;HaplotypeScore=75.2485;InbreedingCoeff=-0.1325;MQ=54.91;MQ0=16;MQRankSum=-4.240;QD=2.21;ReadPosRankSum=0.754;VQSLOD=1.5698;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:69.22:0,69,1115	0/0:5,0:5:12.04:0,12,195	0/0:22,0:4:5.38:0,5,42	0/0:28,0:9:4.78:0,5,28	0/0:19,0:19:54.14:0,54,794	0/1:13,0:13:29.31:29,0,229	0/1:9,0:9:14.50:14,0,224	0/0:27,0:24:72.08:0,72,952	0/0:10,0:10:27.08:0,27,415	0/0:25,0:24:69.20:0,69,1050	0/0:17,0:17:45.13:0,45,697	0/1:13,0:13:46.73:47,0,162	0/1:11,0:11:35.43:35,0,128	0/0:15,0:15:11.41:0,11,286	0/0:17,0:17:51.17:0,51,798	0/0:15,0:13:39.07:0,39,577	0/0:33,0:30:81.26:0,81,1278	0/0:23,0:22:66.21:0,66,1037	0/0:19,0:18:51.80:0,52,670	0/0:17,0:15:45.13:0,45,684	0/0:11,0:10:27.05:0,27,369	0/0:11,0:11:33.08:0,33,447	0/1:15,0:14:33.01:33,0,203	0/1:9,5:12:99:130,0,124	0/0:19,0:19:54.12:0,54,874	0/0:18,0:18:51.16:0,51,804	0/0:29,0:28:81.12:0,81,1229	0/0:19,0:19:57.19:0,57,925
chr10	39036758	.	CTGTTTGTT	C	4678.03	PASS	AB=0.969;AC=37;AF=0.712;AN=52;BaseQRankSum=10.145;DP=466;FS=18.589;HRun=0;HaplotypeScore=128.7422;InbreedingCoeff=0.6637;MQ=51.43;MQ0=5;MQRankSum=-9.344;QD=14.85;ReadPosRankSum=1.441;VQSLOD=2.5247;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:21:21.06:300,21,0	1/1:4,3:7:6.02:150,6,0	0/0:19,0:13:1.82:0,2,5	./.	1/1:11,11:22:27.06:583,27,0	1/1:5,0:9:6.02:107,6,0	1/1:6,0:13:6.02:107,6,0	0/0:27,0:26:15.04:0,15,376	1/1:5,8:13:12.04:300,12,0	1/1:15,0:24:11.71:180,12,0	1/1:10,0:18:17.98:296,18,0	1/1:2,0:8:6.02:112,6,0	1/1:4,0:12:15.05:256,15,0	1/1:6,0:14:18.06:335,18,0	1/1:7,14:21:33.11:824,33,0	1/1:7,13:20:24.08:598,24,0	1/1:15,1:16:3.01:75,3,0	1/1:9,0:16:6.02:102,6,0	0/0:15,0:14:6.02:0,6,241	0/0:18,0:18:36.12:0,36,1358	0/1:30,1:31:14.46:14,0,2080	./.	1/1:8,0:12:5.79:112,6,0	1/1:14,0:22:8.15:150,8,0	1/1:6,0:13:8.89:78,9,0	0/0:21,0:21:27.09:0,27,1103	0/0:19,0:19:51.18:0,51,2047	0/0:8,0:8:6.02:0,6,238
chr10	39037427	.	T	TTTTC	1153.33	PASS	AB=0.965;AC=17;AF=0.315;AN=54;BaseQRankSum=3.801;DP=513;FS=4.065;HRun=0;HaplotypeScore=114.9494;InbreedingCoeff=0.1432;MQ=48.06;MQ0=23;MQRankSum=-3.064;QD=4.83;ReadPosRankSum=0.340;VQSLOD=2.3416;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:25:13.84:317,14,0	0/0:7,0:6:4.03:0,4,24	0/0:43,0:9:15.55:0,16,122	0/0:39,0:12:11.90:0,12,123	0/0:13,0:12:0.60:0,1,65	1/1:18,0:18:6.87:115,7,0	0/1:6,9:16:11.84:71,0,12	0/0:32,0:30:37.94:0,38,357	0/0:14,0:13:19.56:0,20,187	0/1:20,0:20:1.72:164,0,2	0/1:15,0:13:16.98:64,0,17	0/0:12,0:11:14.16:0,14,98	0/0:8,0:8:3.81:0,4,54	0/1:17,0:16:2.01:112,0,2	0/1:10,0:10:0.65:1,0,118	0/1:18,0:18:10.96:11,0,164	0/0:27,0:27:23.42:0,23,347	1/1:17,0:15:2.44:211,2,0	0/0:30,0:28:36.16:0,36,396	0/1:11,0:9:16.43:16,0,33	0/0:15,0:15:17.94:0,18,183	0/1:7,0:7:10.34:10,0,19	0/0:10,0:8:11.38:0,11,81	0/1:20,0:19:3.88:4,0,51	0/1:20,0:19:0.87:204,0,1	0/0:21,0:20:29.95:0,30,314	0/1:23,0:22:2.22:2,0,211	./.
chr10	39037677	.	TGGG	T	4970.83	PASS	AB=0.906;AC=19;AF=0.339;AN=56;BaseQRankSum=11.936;DP=408;FS=1.940;HRun=7;HaplotypeScore=57.7133;InbreedingCoeff=0.8759;MQ=67.53;MQ0=2;MQRankSum=-2.318;QD=30.87;ReadPosRankSum=5.499;VQSLOD=2.2187;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,19:20:54.18:828,54,0	0/0:4,0:4:12.04:0,12,268	0/0:15,0:13:33.09:0,33,637	0/0:12,0:10:27.09:0,27,570	0/0:3,0:3:6.02:0,6,134	1/1:2,17:19:39.13:598,39,0	1/1:0,21:19:51.17:781,51,0	0/0:26,0:25:69.24:0,69,1503	0/0:13,0:13:33.11:0,33,710	1/1:1,12:13:36.12:551,36,0	1/1:0,5:5:15.05:230,15,0	0/0:11,0:11:30.10:0,30,650	1/1:2,8:10:18.06:276,18,0	1/1:3,14:17:42.14:644,42,0	0/0:12,0:12:36.12:0,36,802	0/0:13,0:13:36.12:0,36,804	0/0:29,0:29:81.28:0,81,1807	1/1:1,13:13:33.11:506,33,0	0/0:18,0:18:48.16:0,48,1072	0/0:7,0:7:21.07:0,21,466	0/0:31,0:31:87.30:0,87,1921	0/0:2,0:2:6.02:0,6,134	0/0:15,0:15:45.14:0,45,932	0/0:18,0:18:54.19:0,54,1186	1/1:1,12:13:33.11:505,33,0	0/1:26,3:29:52.20:52,0,1431	0/0:14,0:13:39.12:0,39,805	0/0:4,0:4:12.04:0,12,268
chr10	39040838	.	C	CT	2127.55	PASS	AB=1.000;AC=19;AF=0.352;AN=54;BaseQRankSum=-9.378;DP=378;FS=1.058;HRun=9;HaplotypeScore=45.2895;InbreedingCoeff=0.8965;MQ=79.40;MQ0=0;MQRankSum=-1.650;QD=17.02;ReadPosRankSum=3.258;VQSLOD=3.4911;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,17:19:26.23:476,26,0	0/0:5,0:5:9:0,9,78	0/1:17,0:13:2.89:3,0,43	0/0:10,0:10:13.51:0,14,99	0/0:22,0:22:50.18:0,50,419	1/1:4,12:16:30.08:332,30,0	1/1:0,5:5:15.04:166,15,0	0/0:35,0:35:83.95:0,84,724	0/0:9,0:9:20.98:0,21,177	1/1:2,12:14:36.08:387,36,0	1/1:4,11:15:30:305,30,0	0/0:6,0:6:15:0,15,130	1/1:2,8:10:6.02:66,6,0	1/1:4,5:9:15.04:165,15,0	0/0:12,0:12:26.95:0,27,224	0/0:8,0:8:17.98:0,18,152	0/0:25,0:25:59.98:0,60,521	1/1:0,9:9:18.05:199,18,0	0/0:14,0:14:32.95:0,33,283	0/0:19,0:19:16.34:0,16,161	0/0:13,0:13:21.76:0,22,181	0/0:8,0:8:11.97:0,12,104	0/0:8,0:8:17.96:0,18,153	./.	1/1:1,10:11:21.06:232,21,0	0/0:23,0:23:47.34:0,47,396	0/0:21,0:21:59.92:0,60,505	0/0:14,0:14:41.99:0,42,365
chr10	39041178	.	A	AT	2634.19	PASS	AB=0.958;AC=17;AF=0.304;AN=56;BaseQRankSum=-5.546;DP=583;FS=0.000;HRun=12;HaplotypeScore=61.0445;InbreedingCoeff=0.7164;MQ=67.98;MQ0=0;MQRankSum=-0.413;QD=14.97;ReadPosRankSum=-0.367;VQSLOD=4.1309;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,101,735	0/0:6,0:7:10.91:0,11,69	0/1:13,0:11:0.64:1,0,40	0/1:10,0:10:9.38:9,0,76	0/0:32,1:33:48.35:0,48,516	1/1:6,12:18:5.13:212,5,0	1/1:5,18:25:50.75:466,51,0	0/0:29,0:29:74.55:0,75,546	0/0:16,0:16:3.60:0,4,190	0/0:24,0:24:51.83:0,52,426	0/0:21,0:22:52.65:0,53,372	1/1:1,16:17:45.07:436,45,0	1/1:2,17:19:45.07:435,45,0	1/1:3,20:24:53.92:510,54,0	0/0:25,1:26:42.70:0,43,473	0/0:17,0:17:35.69:0,36,259	0/0:24,0:24:65.60:0,66,480	0/0:26,1:27:33.39:0,33,403	0/0:15,1:17:5.27:0,5,184	0/0:20,0:21:15.51:0,16,271	0/0:15,0:15:32.78:0,33,239	0/0:29,0:29:77.40:0,77,559	1/1:2,14:16:17.15:328,17,0	1/1:4,16:20:42.05:402,42,0	0/0:19,0:18:30.09:0,30,234	0/1:12,2:14:25.57:26,0,163	0/0:23,0:26:62.71:0,63,430	0/0:10,0:10:17.84:0,18,129
chr10	39042884	.	TGTGCCATGCTACTGTCTGG	T	1694.74	PASS	AB=1.000;AC=25;AF=0.481;AN=52;BaseQRankSum=2.667;DP=683;FS=3.521;HRun=0;HaplotypeScore=312.8493;InbreedingCoeff=0.7365;MQ=82.62;MQ0=3;MQRankSum=-2.616;QD=5.67;ReadPosRankSum=-0.021;VQSLOD=2.1429;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:27:20.85:154,21,0	0/0:8,0:8:9.02:0,9,498	./.	0/1:31,0:30:0:0,0,0	0/0:29,0:29:33.09:0,33,2092	1/1:17,8:25:6.02:266,6,0	1/1:26,0:26:17.91:140,18,0	0/0:33,0:33:3:0,3,28	0/0:32,0:32:33.10:0,33,1919	1/1:20,0:20:14.55:95,15,0	1/1:17,0:17:9:79,9,0	1/1:18,11:29:2.95:150,3,0	1/1:7,7:14:3.01:151,3,0	1/1:14,8:22:9.03:452,9,0	0/0:34,0:34:33.01:0,33,728	0/0:19,0:18:18.02:0,18,626	0/0:25,0:25:39.05:0,39,1968	1/1:27,0:27:17.78:132,18,0	0/0:21,0:21:3.01:0,3,215	0/0:14,0:14:15.02:0,15,671	0/0:62,0:62:81.19:0,81,4464	0/0:17,0:17:15:0,15,339	1/1:11,8:19:2.96:89,3,0	1/1:28,0:28:2.98:21,3,0	1/1:9,5:14:3.01:151,3,0	0/0:26,0:26:15.03:0,15,403	0/0:20,0:19:21.03:0,21,1010	./.
chr10	39043822	.	GCAC	G	6288.66	PASS	AB=0.897;AC=19;AF=0.339;AN=56;BaseQRankSum=12.881;DP=505;FS=0.000;HRun=0;HaplotypeScore=75.2870;InbreedingCoeff=0.9186;MQ=76.58;MQ0=0;MQRankSum=-3.801;QD=33.99;ReadPosRankSum=3.675;VQSLOD=5.3077;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,28:30:60.20:964,60,0	0/0:7,0:7:21.07:0,21,464	0/0:18,0:18:39.12:0,39,788	0/0:20,0:20:54.19:0,54,1143	0/0:27,0:27:75.24:0,75,1603	1/1:1,17:18:45.15:723,45,0	1/1:1,11:12:30.10:482,30,0	0/0:31,0:31:78.27:0,78,1687	0/0:8,0:8:24.08:0,24,509	1/1:4,11:15:33.11:530,33,0	1/1:1,13:14:36.12:578,36,0	0/0:17,0:17:51.18:0,51,1108	1/1:1,15:16:41.26:672,41,0	1/1:1,17:18:48.16:771,48,0	0/0:19,0:19:57.18:0,57,1211	0/0:18,0:18:48.16:0,48,1059	0/0:26,0:26:77.47:0,77,1584	1/1:3,23:25:63.21:1012,63,0	0/0:20,0:20:54.19:0,54,1147	0/0:18,0:18:54.19:0,54,1192	0/0:19,0:19:51.17:0,51,1103	0/0:8,0:8:24.08:0,24,530	0/0:16,0:16:48.16:0,48,1017	0/0:17,0:17:48.16:0,48,1058	1/1:0,10:10:30.10:482,30,0	0/1:23,3:26:72.41:72,0,1319	0/0:23,0:22:57.17:0,57,1213	0/0:8,0:8:24.08:0,24,529
chr10	39044434	.	AGAACC	A	595.47	PASS	AB=0.930;AC=8;AF=0.143;AN=56;BaseQRankSum=6.179;DP=450;FS=22.799;HRun=0;HaplotypeScore=94.2655;InbreedingCoeff=-0.1568;MQ=50.34;MQ0=23;MQRankSum=-2.364;QD=5.36;ReadPosRankSum=-2.240;VQSLOD=-0.1416;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:18:25.61:0,26,482	0/0:5,0:5:15.05:0,15,366	0/0:3,0:2:5.27:0,5,22	0/1:9,0:6:15.23:17,0,15	0/0:22,0:22:59.86:0,60,1409	0/1:9,0:9:15.87:16,0,118	0/0:11,0:9:12.01:0,12,192	0/0:23,0:23:63.60:0,64,1269	0/0:14,0:13:35.91:0,36,731	0/1:12,8:20:99:271,0,580	0/1:16,0:14:63.62:69,0,64	0/0:14,0:14:32.97:0,33,593	0/1:17,0:15:99:122,0,459	0/1:11,1:12:99:199,0,336	0/0:16,0:15:36.08:0,36,641	0/0:17,0:17:30.61:0,31,768	0/0:24,0:18:24.16:0,24,731	0/1:12,0:9:31.02:31,0,176	0/0:19,0:17:51.16:0,51,1155	0/0:23,0:22:60.03:0,60,1150	0/0:11,0:8:24.05:0,24,434	0/0:17,0:17:48.15:0,48,1086	0/0:22,0:22:56.36:0,56,964	0/0:10,0:7:15.05:0,15,290	0/1:13,0:13:2.49:2,0,298	0/0:21,0:21:60.20:0,60,1348	0/0:28,0:28:71.15:0,71,1456	0/0:15,0:13:22.69:0,23,602
chr10	39047045	.	CTTCTTGCACTCTAATTCTAGGACTCTAA	C	13270.80	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=12.575;DP=634;FS=9.825;HRun=0;HaplotypeScore=416.6189;InbreedingCoeff=0.9841;MQ=82.76;MQ0=0;MQRankSum=-12.059;QD=110.59;ReadPosRankSum=5.284;VQSLOD=3.3732;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:81.26:0,81,9010	1/1:0,11:11:15.05:1123,15,0	0/0:25,0:25:62.39:0,62,3798	0/0:17,0:17:48.07:0,48,3174	1/1:1,18:19:30.57:1894,31,0	0/0:27,0:27:81.26:0,81,7860	0/0:32,0:32:90.30:0,90,9725	0/0:30,0:30:78.20:0,78,6085	1/1:0,12:12:18.06:1348,18,0	0/0:27,0:27:78.26:0,78,8009	0/0:30,0:30:81.28:0,81,9362	0/0:22,0:22:66.23:0,66,7860	0/0:25,0:25:72.25:0,72,8946	0/0:21,0:21:60.21:0,60,7090	1/1:2,30:32:57.20:4268,57,0	1/1:1,15:16:33.11:2471,33,0	1/1:1,10:11:9.03:674,9,0	0/0:23,0:23:63.22:0,63,6975	0/0:21,0:21:63.21:0,63,6125	0/0:17,0:17:48.06:0,48,5122	0/0:33,0:33:93.32:0,93,10349	1/1:1,18:19:21.07:1494,21,0	0/0:21,0:21:63.21:0,63,6722	0/0:31,0:31:87.30:0,87,9952	0/0:22,0:21:60.18:0,60,5383	0/0:31,0:31:93.32:0,93,10459	0/0:17,0:17:51.16:0,51,5608	0/0:15,0:15:45.15:0,45,5231
chr10	39051391	.	AG	A	9837.48	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=17.973;DP=793;FS=0.886;HRun=1;HaplotypeScore=76.5038;InbreedingCoeff=1.0000;MQ=85.46;MQ0=0;MQRankSum=-8.890;QD=39.51;ReadPosRankSum=4.566;VQSLOD=5.3573;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,29:29:78.26:1090,78,0	0/0:14,0:14:42.14:0,42,671	0/0:37,0:37:99:0,108,1637	0/0:23,0:23:69.23:0,69,1069	0/0:43,0:43:99:0,129,2058	1/1:0,25:25:72.24:1007,72,0	1/1:0,24:24:69.23:965,69,0	0/0:50,0:50:99:0,150,2250	0/0:29,0:29:87.28:0,87,1365	1/1:0,39:39:99:1601,117,0	1/1:0,20:20:57.15:775,57,0	0/0:25,0:25:75.23:0,75,1171	1/1:0,34:34:96.32:1342,96,0	1/1:0,27:27:75.25:1048,75,0	0/0:31,0:31:93.32:0,93,1483	0/0:23,0:23:69.21:0,69,1057	0/0:30,0:30:90.24:0,90,1364	1/1:0,23:23:66.22:918,66,0	0/0:22,0:22:66.20:0,66,1011	0/0:31,0:31:93.30:0,93,1461	0/0:24,0:24:72.23:0,72,1126	0/0:31,0:31:93.32:0,93,1485	0/0:30,0:30:90.31:0,90,1437	0/0:18,0:18:54.18:0,54,860	1/1:0,28:28:78.26:1091,78,0	0/0:30,1:31:51.31:0,51,1289	0/0:33,0:32:99:0,99,1532	0/0:19,0:19:57.19:0,57,911
chr10	39055197	.	AT	A	6840.96	PASS	AB=0.880;AC=19;AF=0.339;AN=56;BaseQRankSum=14.616;DP=638;FS=0.000;HRun=5;HaplotypeScore=60.5072;InbreedingCoeff=0.9194;MQ=76.52;MQ0=0;MQRankSum=-1.096;QD=26.21;ReadPosRankSum=2.040;VQSLOD=4.5980;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,35:36:99:1123,99,0	0/0:9,0:9:27.09:0,27,368	0/0:14,0:14:28.98:0,29,358	0/0:12,0:12:20.51:0,21,265	0/0:21,0:21:60.18:0,60,783	1/1:2,26:28:69.20:783,69,0	1/1:0,23:23:51.15:579,51,0	0/0:33,0:33:87.28:0,87,1174	0/0:19,0:19:54.17:0,54,724	1/1:1,21:22:63.18:714,63,0	1/1:1,19:20:51.15:579,51,0	0/0:24,0:24:69.23:0,69,942	1/1:1,15:16:36.10:408,36,0	1/1:2,27:29:72.20:816,72,0	0/0:27,0:27:78.23:0,78,1023	0/0:25,0:25:72.22:0,72,953	0/0:24,0:23:72.23:0,72,967	1/1:2,37:39:99:1123,99,0	0/0:24,0:24:63.21:0,63,861	0/0:17,0:17:48.16:0,48,653	0/0:36,0:36:99:0,99,1353	0/0:19,0:19:51.17:0,51,697	0/0:23,0:23:63.21:0,63,862	0/0:21,0:21:63.21:0,63,860	1/1:3,23:26:60.17:681,60,0	0/1:19,3:22:35.91:36,0,713	0/0:17,0:17:45.15:0,45,616	0/0:12,0:12:36.12:0,36,491
chr10	39055363	.	TG	T	5235.96	PASS	AB=0.960;AC=12;AF=0.214;AN=56;BaseQRankSum=12.726;DP=720;FS=1.525;HRun=2;HaplotypeScore=68.1432;InbreedingCoeff=0.8078;MQ=82.61;MQ0=0;MQRankSum=-2.384;QD=27.56;ReadPosRankSum=2.065;VQSLOD=4.5631;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,54:54:99:1909,147,0	0/0:13,0:13:39.13:0,39,584	0/0:31,0:31:87.25:0,87,1240	0/1:25,0:25:9.94:10,0,740	0/0:16,0:16:45.13:0,45,645	0/0:28,0:28:84.28:0,84,1256	0/0:24,0:24:69.23:0,69,1034	0/0:35,0:35:99:0,105,1573	0/0:27,0:27:81.27:0,81,1195	1/1:0,16:16:45.15:584,45,0	1/1:0,12:12:36.12:467,36,0	0/0:27,0:27:81.27:0,81,1214	0/0:20,0:20:57.18:0,57,835	0/0:29,0:29:87.28:0,87,1284	0/0:22,0:22:66.22:0,66,989	0/0:32,0:32:96.33:0,96,1439	0/0:32,0:32:93.29:0,93,1369	1/1:0,33:33:96.31:1247,96,0	0/0:15,0:15:45.12:0,45,634	0/0:18,0:18:51.17:0,51,764	0/0:58,0:58:99:0,175,2525	0/0:18,0:18:51.16:0,51,740	0/0:18,0:18:51.16:0,51,744	0/0:31,0:31:90.30:0,90,1349	1/1:0,27:27:78.25:1010,78,0	0/1:21,2:23:8.68:9,0,871	0/0:19,0:18:57.19:0,57,853	0/0:17,0:17:51.17:0,51,764
chr10	39056198	.	GTTTTT	G	6490.15	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=4.013;DP=671;FS=1.223;HRun=13;HaplotypeScore=129.3509;InbreedingCoeff=0.9776;MQ=70.21;MQ0=16;MQRankSum=-5.122;QD=32.29;ReadPosRankSum=6.271;VQSLOD=3.1301;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,34:38:59.45:994,59,0	0/0:7,0:8:24.08:0,24,586	0/0:45,0:16:6.70:0,7,186	0/0:43,0:19:10.24:0,10,285	0/0:25,0:26:66.21:0,66,1509	1/1:0,18:17:33.11:547,33,0	1/1:3,24:27:51.12:854,51,0	0/0:30,0:33:63.14:0,63,1360	0/0:14,0:17:51.17:0,51,1317	1/1:2,16:18:42.08:681,42,0	1/1:1,19:20:45.02:700,45,0	0/0:6,0:11:30.09:0,30,535	1/1:1,18:17:33.10:565,33,0	1/1:0,22:22:50.87:869,51,0	0/0:20,0:24:60.20:0,60,1499	0/0:17,0:21:60.19:0,60,1415	0/0:41,0:43:99:0,108,2739	1/1:2,19:21:42.13:717,42,0	0/0:23,0:22:51.16:0,51,1099	0/0:18,0:22:63.18:0,63,1457	0/0:17,0:20:50.73:0,51,1213	0/0:18,0:20:54.11:0,54,1295	0/0:6,0:24:67.37:0,67,987	0/0:4,0:29:72.25:0,72,1335	1/1:2,15:17:33.10:563,33,0	0/0:23,0:26:66.17:0,66,1507	0/0:18,0:18:42.14:0,42,1062	0/0:7,0:11:21.54:0,22,511
chr10	39057122	.	C	CT	3117.35	PASS	AB=0.590;AC=14;AF=0.250;AN=56;BaseQRankSum=-4.112;DP=595;FS=0.820;HRun=10;HaplotypeScore=58.8859;InbreedingCoeff=0.7105;MQ=61.43;MQ0=10;MQRankSum=-2.888;QD=19.01;ReadPosRankSum=0.862;VQSLOD=4.3328;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,26:35:50.55:743,51,0	0/0:9,0:9:23.95:0,24,193	0/0:27,0:11:8.30:0,8,83	0/0:13,0:11:3.47:0,3,44	0/0:27,0:27:56.60:0,57,462	0/1:6,12:18:10.19:313,0,10	1/1:3,11:14:33.08:351,33,0	0/0:27,0:26:65.89:0,66,539	0/0:22,0:22:47.90:0,48,391	1/1:5,17:21:48.88:489,49,0	1/1:10,6:16:2.38:216,2,0	0/0:15,1:16:3.94:0,4,236	0/1:5,13:18:37.83:252,0,38	1/1:3,16:21:26.21:451,26,0	0/0:22,0:23:58.96:0,59,474	0/0:17,0:17:32.95:0,33,271	0/0:32,0:32:77.08:0,77,619	1/1:3,17:20:26.57:486,27,0	0/0:17,1:16:9.95:0,10,286	0/0:19,0:19:47.89:0,48,388	0/0:21,0:21:47.91:0,48,391	0/0:13,0:14:31.96:0,32,246	0/0:32,0:32:54.59:0,55,549	0/0:36,0:35:89.86:0,90,736	0/0:23,0:24:46.72:0,47,371	0/0:21,0:23:39.98:0,40,302	0/0:16,0:18:40.96:0,41,323	0/0:10,0:11:20:0,20,153
chr10	39057919	.	CA	C	929.25	PASS	AB=0.793;AC=19;AF=0.339;AN=56;BaseQRankSum=5.307;DP=466;FS=5.003;HRun=15;HaplotypeScore=60.2950;InbreedingCoeff=0.4234;MQ=54.94;MQ0=21;MQRankSum=-1.356;QD=5.40;ReadPosRankSum=3.338;VQSLOD=2.3860;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:10,11:19:5.57:148,6,0	0/0:2,0:2:3:0,3,26	0/0:36,1:6:7.17:0,7,31	0/0:30,0:7:3.48:0,3,39	0/0:20,0:22:51.56:0,52,426	1/1:5,13:19:31.58:198,32,0	1/1:2,10:13:1.40:120,1,0	0/0:28,1:27:50.63:0,51,420	0/0:13,1:14:7.73:0,8,191	0/1:7,7:15:2.75:110,0,3	1/1:4,11:17:19.38:154,19,0	0/0:9,0:16:5.83:0,6,38	1/1:5,8:14:11.07:65,11,0	1/1:3,4:7:4.94:25,5,0	0/1:7,0:7:4.25:4,0,87	0/1:8,3:11:40.37:40,0,83	0/0:34,0:34:35.95:0,36,443	1/1:5,11:17:27.71:166,28,0	0/0:12,1:13:2.47:0,2,98	0/1:15,2:18:11.34:11,0,155	0/0:4,0:4:0.26:0,0,22	0/0:11,0:12:17.84:0,18,146	0/0:10,0:10:14.83:0,15,115	0/0:0,0:3:5.68:0,6,28	0/1:4,6:10:11.58:62,0,12	0/0:16,0:17:32.52:0,33,251	0/0:18,0:19:29.84:0,30,251	0/0:20,1:23:37.09:0,37,392
chr10	39058027	.	CATTATAATTGTTATGTTG	C	10706.85	PASS	AB=0.611;AC=17;AF=0.304;AN=56;BaseQRankSum=13.450;DP=511;FS=0.000;HRun=0;HaplotypeScore=249.7259;InbreedingCoeff=0.9026;MQ=63.38;MQ0=0;MQRankSum=-11.584;QD=78.73;ReadPosRankSum=4.231;VQSLOD=4.2541;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,8:12:12.02:623,12,0	0/0:12,0:12:36.11:0,36,2480	0/0:5,0:5:15.05:0,15,759	0/0:11,0:11:26.27:0,26,1918	0/0:40,0:40:99:0,108,8084	1/1:3,13:16:27.09:1402,27,0	1/1:1,5:6:15.05:779,15,0	0/0:27,0:27:81.26:0,81,5376	0/0:16,0:16:45.15:0,45,3429	1/1:6,19:25:51.16:2448,51,0	1/1:6,17:23:42.14:1862,42,0	0/0:17,0:17:48.15:0,48,3182	1/1:3,8:10:18.06:863,18,0	1/1:5,10:14:21.07:1090,21,0	0/0:17,0:17:48.16:0,48,3279	0/0:22,0:22:57.20:0,57,4099	0/0:41,0:41:99:0,117,9263	0/1:4,7:11:99:150,0,156	0/0:17,0:17:51.17:0,51,3481	0/0:20,0:20:60.21:0,60,4821	0/0:10,0:10:30.10:0,30,2510	0/0:12,0:12:36.11:0,36,2486	0/0:18,0:18:54.16:0,54,3757	0/0:11,0:11:33.11:0,33,2675	1/1:7,10:17:30.10:1488,30,0	0/0:29,0:29:81.26:0,81,5756	0/0:26,0:26:75.26:0,75,6061	0/0:24,0:24:72.25:0,72,5378
chr10	39058295	.	C	CGT	612.70	PASS	AB=0.875;AC=13;AF=0.260;AN=50;BaseQRankSum=-1.849;DP=588;FS=19.459;HRun=0;HaplotypeScore=101.1016;InbreedingCoeff=-0.0177;MQ=70.73;MQ0=10;MQRankSum=-0.723;QD=2.60;ReadPosRankSum=-1.407;VQSLOD=0.6613;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:34:3.13:0,3,13	0/0:7,0:9:5.85:0,6,46	./.	./.	0/0:17,0:19:8.85:0,9,77	0/1:12,0:13:17:17,0,48	0/0:18,0:18:5.14:0,5,20	1/1:31,0:31:1.25:3,1,0	0/0:14,0:14:9:0,9,87	0/0:20,0:26:2.72:0,3,14	0/0:5,0:10:5.34:0,5,23	0/0:11,0:12:2.84:0,3,14	1/1:15,0:18:8.87:69,9,0	1/1:17,0:24:5.51:34,6,0	0/1:16,0:19:30.87:31,0,60	0/0:18,0:18:15.02:0,15,151	0/0:23,0:21:1.24:0,1,29	0/0:12,0:17:5.64:0,6,27	./.	0/1:14,0:15:19.86:97,0,20	0/1:42,3:46:19.87:102,0,20	0/0:10,0:10:5.85:0,6,46	0/0:9,0:16:11.36:0,11,56	0/0:13,0:20:14.20:0,14,70	0/0:9,0:13:2.84:0,3,14	0/1:17,3:22:24.56:40,0,25	0/1:15,8:23:42.21:199,0,42	0/1:18,6:24:45.74:158,0,46
chr10	39058605	.	GCCAGCCTGTCTGTCCTTCTGATTCTTGGC	G	998.12	PASS	AB=0.857;AC=11;AF=0.196;AN=56;BaseQRankSum=2.091;DP=449;FS=40.084;HRun=0;HaplotypeScore=291.4221;InbreedingCoeff=0.6963;MQ=59.97;MQ0=11;MQRankSum=-1.163;QD=10.62;ReadPosRankSum=2.383;VQSLOD=1.5726;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:24:39.12:656,39,0	0/0:8,0:8:18.03:0,18,444	0/1:18,0:10:3.61:4,0,54	0/0:10,0:9:10.35:0,10,218	0/0:10,0:10:15:0,15,329	0/0:14,0:12:30.08:0,30,714	0/0:20,0:18:23.91:0,24,472	0/1:18,0:17:15.04:15,0,392	0/0:13,0:13:21.05:0,21,542	1/1:7,0:6:6:59,6,0	0/1:2,6:7:0:0,0,0	0/0:25,0:25:45.10:0,45,948	0/0:8,0:8:15.04:0,15,331	0/0:19,0:19:39.06:0,39,581	0/0:26,0:26:57.18:0,57,1253	0/0:29,0:29:66.19:0,66,1434	0/0:31,0:31:69.20:0,69,1469	1/1:9,0:9:18.03:289,18,0	0/0:18,0:10:17.81:0,18,359	0/0:13,0:13:18.02:0,18,274	0/0:30,0:29:46.15:0,46,1242	0/0:15,0:14:21.05:0,21,525	0/0:15,0:14:32.86:0,33,622	0/0:15,0:15:32.94:0,33,803	1/1:8,0:7:9.02:129,9,0	0/0:10,0:10:21.05:0,21,414	0/0:21,0:20:25.09:0,25,801	0/0:5,0:5:12.04:0,12,211
chr10	39059685	.	G	GGC	4335.01	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=11.656;DP=487;FS=11.795;HRun=0;HaplotypeScore=71.5352;InbreedingCoeff=0.9628;MQ=76.98;MQ0=0;MQRankSum=-3.789;QD=31.41;ReadPosRankSum=-0.464;VQSLOD=5.5982;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,13:16:20.79:338,21,0	0/0:4,0:4:9.03:0,9,136	0/0:11,0:11:27.09:0,27,409	0/0:13,0:13:36.07:0,36,481	0/0:14,0:13:33.11:0,33,505	1/1:2,12:14:14.98:243,15,0	1/1:2,28:31:60.20:1118,60,0	0/0:18,0:18:48.15:0,48,713	0/0:22,0:22:63.18:0,63,932	1/1:2,10:12:32.59:386,33,0	1/1:1,5:6:9.03:171,9,0	0/0:34,0:34:99:0,99,1471	1/1:2,10:12:18.06:325,18,0	1/1:2,13:18:41.93:740,42,0	0/0:19,0:19:57.17:0,57,830	0/0:10,0:10:30.10:0,30,459	0/0:38,0:38:99:0,111,1682	1/1:2,18:20:45.15:858,45,0	0/0:19,0:19:54.17:0,54,789	0/0:12,0:12:36.12:0,36,550	0/0:40,0:40:99:0,117,1765	0/0:12,0:12:26.92:0,27,381	0/0:15,0:15:42.14:0,42,640	0/0:32,0:31:96.33:0,96,1462	1/1:3,6:9:9.03:156,9,0	0/0:20,0:20:54.17:0,54,806	0/0:12,0:12:36.12:0,36,545	0/0:4,0:4:12.04:0,12,182
chr10	39061784	.	AGAACC	A	77.13	PASS	AB=0.905;AC=4;AF=0.071;AN=56;BaseQRankSum=-0.648;DP=406;FS=13.307;HRun=0;HaplotypeScore=90.1291;InbreedingCoeff=0.0212;MQ=62.05;MQ0=2;MQRankSum=0.224;QD=1.33;ReadPosRankSum=-3.236;VQSLOD=0.0801;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:17:42.14:0,42,846	0/0:7,0:7:18.06:0,18,376	0/0:16,0:10:27.05:0,27,395	0/1:21,0:8:5.95:15,0,6	0/0:17,0:17:41.29:0,41,804	0/1:14,0:14:5.53:6,0,538	0/1:8,0:9:36.87:37,0,326	0/0:22,0:22:60.16:0,60,1147	0/0:11,0:11:24.08:0,24,505	0/0:19,0:18:54.15:0,54,1095	0/1:9,4:13:99:122,0,395	0/0:10,0:10:26.96:0,27,504	0/0:5,0:5:15.05:0,15,357	0/0:7,0:7:21.06:0,21,475	0/0:18,0:18:51.14:0,51,909	0/0:13,0:13:33.11:0,33,635	0/0:19,0:19:50.46:0,50,804	0/0:13,0:12:30.10:0,30,619	0/0:18,0:18:48.07:0,48,963	0/0:15,0:14:39.13:0,39,795	0/0:15,0:15:39.07:0,39,780	0/0:21,0:21:54.16:0,54,1027	0/0:13,0:13:30.52:0,31,586	0/0:9,0:9:12.04:0,12,250	0/0:11,0:11:8.99:0,9,498	0/0:20,0:20:60.10:0,60,1122	0/0:16,0:17:40.83:0,41,767	0/0:14,0:13:36.09:0,36,638
chr10	39061789	.	CA	C	2174.40	PASS	AB=0.710;AC=30;AF=0.536;AN=56;BaseQRankSum=-6.630;DP=444;FS=2.198;HRun=14;HaplotypeScore=72.5865;InbreedingCoeff=0.5102;MQ=63.03;MQ0=3;MQRankSum=6.955;QD=7.74;ReadPosRankSum=6.027;VQSLOD=2.8293;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:22:28.87:0,29,163	1/1:1,7:8:11.86:82,12,0	0/1:17,1:13:0.01:0,0,100	0/0:19,0:6:7.46:0,7,32	1/1:3,15:18:29.59:205,30,0	0/0:14,0:20:24.34:0,24,134	0/0:10,0:10:9.19:0,9,51	0/1:14,8:24:16.15:146,0,16	1/1:3,8:11:20.82:144,21,0	0/0:10,0:22:50.79:0,51,270	0/0:15,0:15:16.26:0,16,101	0/1:7,2:9:40.84:47,0,41	0/0:7,0:7:15.91:0,16,95	0/0:12,0:11:21.90:0,22,119	1/1:2,13:16:34.73:232,35,0	1/1:5,7:15:18.67:114,19,0	1/1:7,10:17:1.79:139,2,0	0/0:10,0:13:20.90:0,21,128	1/1:7,11:19:10.28:204,10,0	1/1:9,6:14:14.76:102,15,0	0/1:5,10:15:14.15:135,0,14	0/1:9,11:22:18.88:160,0,19	1/1:5,6:11:14.80:102,15,0	0/1:2,5:9:16.87:36,0,17	0/0:10,0:20:32.10:0,32,181	1/1:6,11:23:0.62:171,1,0	1/1:5,11:17:17.18:158,17,0	1/1:1,11:14:30.85:197,31,0
chr10	39063366	.	CATATATATATATATATAT	C	2190.23	PASS	AB=0.750;AC=12;AF=0.400;AN=30;BaseQRankSum=3.012;DP=134;FS=0.000;HRun=0;HaplotypeScore=66.9582;InbreedingCoeff=0.3060;MQ=68.79;MQ0=2;MQRankSum=-3.526;QD=34.77;ReadPosRankSum=3.269;VQSLOD=1.1221;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:4,0:4:3.01:0,3,66	0/0:6,0:4:2.22:0,2,65	0/0:6,0:6:3:0,3,25	1/1:8,8:17:21.07:1013,21,0	1/1:4,1:5:3.01:148,3,0	0/0:8,0:7:9.03:0,9,590	./.	1/1:3,1:8:9.95:401,10,0	1/1:6,0:8:8.86:145,9,0	./.	./.	1/1:2,3:5:3.01:148,3,0	./.	0/0:3,0:3:3.01:0,3,197	0/0:9,0:9:9.01:0,9,496	0/1:8,0:13:62.97:241,0,63	0/0:6,0:6:3.01:0,3,232	./.	./.	./.	./.	0/0:2,0:2:3:0,3,25	0/1:5,0:7:31.89:213,0,32	./.	./.	./.
chr10	39065591	.	A	AGT	4661.30	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-13.720;DP=763;FS=4.311;HRun=0;HaplotypeScore=87.1306;InbreedingCoeff=0.9543;MQ=76.94;MQ0=0;MQRankSum=-1.847;QD=35.58;ReadPosRankSum=1.430;VQSLOD=7.2412;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,23:30:54.18:911,54,0	0/0:15,0:15:45.14:0,45,571	0/0:25,0:22:48.07:0,48,593	0/0:32,0:31:69.06:0,69,809	0/0:43,0:43:99:0,126,1606	0/0:24,0:24:54.16:0,54,681	0/0:25,0:25:72.23:0,72,926	0/0:37,0:37:72.22:0,72,914	0/0:22,0:22:60.19:0,60,772	1/1:9,26:35:78.27:1309,78,0	1/1:1,19:20:3.53:619,4,0	0/0:38,0:38:99:0,111,1387	0/0:32,0:32:93.29:0,93,1183	0/0:31,0:31:81.23:0,81,1013	0/0:26,0:26:75.24:0,75,965	0/0:27,0:27:81.26:0,81,1042	0/0:19,0:19:54.18:0,54,693	1/1:1,21:23:60.21:1012,60,0	0/0:15,0:15:33.11:0,33,424	0/0:34,0:34:96.31:0,96,1235	0/0:29,0:29:72.22:0,72,913	0/0:42,0:42:99:0,105,1351	0/0:20,0:20:51.17:0,51,656	0/0:22,0:22:63.20:0,63,810	1/1:3,20:23:48.16:810,48,0	0/0:28,1:29:12.56:0,13,722	0/0:37,0:37:93.28:0,93,1180	0/0:8,0:8:21.07:0,21,270
chr10	39068849	.	G	GGA	4273.69	PASS	AB=0.815;AC=19;AF=0.339;AN=56;BaseQRankSum=-1.229;DP=511;FS=19.745;HRun=0;HaplotypeScore=109.7182;InbreedingCoeff=0.8609;MQ=41.02;MQ0=42;MQRankSum=-4.170;QD=24.70;ReadPosRankSum=0.020;VQSLOD=4.1357;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:20,13:26:30.02:496,30,0	0/0:6,0:6:18.06:0,18,281	1/1:1,0:1:1.55:4,2,0	0/0:2,0:1:1.25:0,1,3	0/0:20,0:18:35.32:0,35,365	1/1:2,15:16:30.10:597,30,0	1/1:6,14:21:30.53:557,31,0	0/0:19,0:17:42.11:0,42,632	0/0:10,0:8:12.02:0,12,192	1/1:7,7:13:24.20:484,24,0	1/1:7,6:12:23.97:395,24,0	0/0:21,0:19:48.07:0,48,694	0/1:17,5:21:2.56:514,0,3	1/1:1,7:10:12.04:211,12,0	0/0:21,0:19:5.42:0,5,310	0/0:13,0:12:20.95:0,21,327	0/0:47,0:42:59.50:0,59,865	1/1:15,9:23:33.09:563,33,0	0/0:24,0:21:11.94:0,12,370	0/0:17,0:16:38.22:0,38,514	0/0:21,0:17:21:0,21,298	0/0:16,0:16:36.12:0,36,565	0/0:19,0:15:33.06:0,33,441	0/0:23,0:17:23.24:0,23,372	1/1:5,10:14:27.09:450,27,0	0/0:25,0:21:18.94:0,19,531	0/0:18,0:17:29.63:0,30,380	0/0:12,0:13:23.99:0,24,314
chr10	39068863	.	CA	C	563.22	PASS	AB=0.832;AC=18;AF=0.321;AN=56;BaseQRankSum=1.991;DP=534;FS=1.837;HRun=16;HaplotypeScore=76.6631;InbreedingCoeff=0.4440;MQ=44.06;MQ0=22;MQRankSum=2.242;QD=2.51;ReadPosRankSum=0.581;VQSLOD=-0.4496;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:17,14:27:15.74:94,16,0	0/0:11,0:11:11.97:0,12,96	0/0:4,0:2:2.60:0,3,10	0/1:6,0:4:0.99:5,0,1	0/0:23,1:25:18.36:0,18,246	0/0:18,1:18:17.82:0,18,129	0/0:18,0:20:15.18:0,15,96	0/0:24,0:24:2.93:0,3,125	0/0:10,1:11:8.79:0,9,157	1/1:11,6:17:7.02:93,7,0	1/1:6,8:14:17.43:107,17,0	1/1:19,2:20:1.51:81,2,0	0/0:21,0:20:30.66:0,31,202	0/0:13,0:12:14.85:0,15,105	0/0:19,0:18:36.59:0,37,276	0/0:12,1:14:7.51:0,8,173	0/0:41,0:42:25.91:0,26,383	1/1:9,8:19:16.22:93,16,0	0/0:22,0:21:50.37:0,50,375	0/0:15,0:15:2.91:0,3,120	0/1:15,3:19:1.92:2,0,87	0/0:20,1:22:7.96:0,8,186	0/1:10,7:15:23.64:43,0,24	0/1:11,7:17:11.96:56,0,12	1/1:17,2:19:21.43:117,21,0	0/1:20,5:26:41.44:41,0,200	0/0:20,0:20:38.88:0,39,286	0/1:11,1:12:2.95:3,0,86
chr10	39072138	.	TACACACAC	T	1045.54	PASS	AB=0.864;AC=20;AF=0.476;AN=42;BaseQRankSum=2.001;DP=505;FS=1.056;HRun=0;HaplotypeScore=127.2126;InbreedingCoeff=0.4479;MQ=63.14;MQ0=9;MQRankSum=-3.685;QD=5.39;ReadPosRankSum=1.727;VQSLOD=2.5477;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:3.01:0,3,103	1/1:7,0:7:5.99:90,6,0	./.	./.	1/1:11,3:13:3.01:71,3,0	1/1:16,0:17:6.02:112,6,0	1/1:20,0:24:3.01:56,3,0	0/0:22,0:22:3:0,3,26	1/1:20,5:25:12.04:296,12,0	0/0:20,0:20:27.09:0,27,938	0/0:19,0:19:6.01:0,6,184	0/0:18,0:18:9.03:0,9,186	0/1:13,0:18:12.40:46,0,12	0/0:12,0:11:5.99:0,6,48	./.	1/1:15,7:21:8.45:221,8,0	1/1:16,3:19:5.81:87,6,0	0/0:12,0:14:9.03:0,9,313	./.	./.	./.	1/1:6,0:6:3.01:56,3,0	0/0:8,0:10:6.02:0,6,113	0/0:24,0:29:18.04:0,18,350	0/0:19,0:19:2.98:0,3,82	0/1:16,0:16:48.87:49,0,105	1/1:18,0:20:6.02:112,6,0	./.
chr10	39072302	.	C	CT	5236.26	PASS	AB=0.813;AC=24;AF=0.429;AN=56;BaseQRankSum=0.973;DP=517;FS=0.367;HRun=10;HaplotypeScore=58.2893;InbreedingCoeff=0.8494;MQ=73.58;MQ0=1;MQRankSum=-0.294;QD=19.47;ReadPosRankSum=1.260;VQSLOD=5.6026;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,30:35:28.91:718,29,0	0/0:6,0:6:17.98:0,18,148	0/0:13,0:13:8.72:0,9,92	0/1:14,0:11:5.62:6,0,81	0/0:25,1:28:34.99:0,35,467	1/1:2,15:17:40.65:420,41,0	1/1:4,18:24:35:392,35,0	0/0:15,0:15:26.95:0,27,219	0/0:23,0:23:59.89:0,60,489	1/1:6,17:23:60.09:616,60,0	1/1:4,17:21:23.46:429,23,0	1/1:4,16:21:14.63:342,15,0	1/1:8,14:22:29.46:499,29,0	1/1:1,9:10:15.04:160,15,0	0/0:12,0:12:26.94:0,27,222	0/0:14,0:14:38.96:0,39,320	0/0:32,0:33:82.87:0,83,665	1/1:4,9:13:33:327,33,0	0/0:12,0:12:20.97:0,21,172	0/0:18,0:19:49.97:0,50,397	0/0:16,0:16:38.93:0,39,317	0/0:15,0:15:38.94:0,39,320	0/1:8,12:20:31.34:310,0,31	1/1:6,22:28:29.49:519,29,0	1/1:3,17:20:48.07:499,48,0	0/0:14,0:15:12.56:0,13,181	0/0:18,0:18:41.93:0,42,345	0/0:9,0:9:20.97:0,21,172
chr10	39072382	.	AC	A	2822.91	PASS	AB=0.889;AC=17;AF=0.304;AN=56;BaseQRankSum=0.662;DP=412;FS=3.358;HRun=10;HaplotypeScore=61.7109;InbreedingCoeff=0.8275;MQ=73.25;MQ0=2;MQRankSum=0.489;QD=17.87;ReadPosRankSum=5.142;VQSLOD=4.2824;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,24:32:83.55:706,84,0	0/0:8,0:8:18:0,18,169	0/0:28,1:18:28.21:0,28,251	0/0:23,0:15:38.26:0,38,294	0/0:14,0:14:20.99:0,21,201	0/0:4,0:10:11.50:0,11,63	0/0:6,0:17:20.05:0,20,118	0/0:5,0:8:11.73:0,12,78	0/0:23,0:22:45.02:0,45,473	1/1:8,14:22:50.97:440,51,0	1/1:3,9:12:26.99:234,27,0	1/1:9,13:22:47.97:413,48,0	0/0:7,0:7:15.04:0,15,166	0/0:14,0:14:39.11:0,39,430	0/1:7,1:8:5.02:5,0,160	0/0:11,0:11:27.01:0,27,283	0/0:32,0:31:84.08:0,84,849	1/1:1,15:16:44.99:390,45,0	0/0:7,0:6:8.85:0,9,68	0/0:8,0:8:5.96:0,6,52	0/0:2,0:8:5.68:0,6,29	0/0:8,0:8:18.01:0,18,175	1/1:3,4:7:14.97:126,15,0	1/1:9,9:18:35.97:308,36,0	1/1:9,12:21:47.81:400,48,0	0/0:3,0:8:5.53:0,6,47	0/0:4,0:10:11.73:0,12,95	0/0:5,0:3:0:0,0,0
chr10	39072559	.	AT	A	7057	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=12.720;DP=603;FS=0.312;HRun=9;HaplotypeScore=63.3415;InbreedingCoeff=0.9903;MQ=62.65;MQ0=1;MQRankSum=0.300;QD=24.33;ReadPosRankSum=0.661;VQSLOD=5.5628;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,40:41:99:989,108,0	0/0:8,0:8:21.06:0,21,242	0/0:18,0:16:36.06:0,36,390	0/0:6,0:4:9.02:0,9,100	0/0:25,0:25:69.20:0,69,788	1/1:0,16:16:39.02:357,39,0	1/1:0,24:24:63.03:577,63,0	0/0:23,0:23:54.14:0,54,613	0/0:23,0:23:66.19:0,66,753	1/1:3,32:35:90.52:824,91,0	1/1:1,15:16:39.01:357,39,0	1/1:2,16:18:45.02:412,45,0	1/1:0,17:17:51.03:467,51,0	1/1:1,23:24:63.03:577,63,0	0/0:11,0:11:33.10:0,33,381	0/0:22,0:22:60.13:0,60,668	0/0:28,0:29:84.08:0,84,946	1/1:1,30:32:87.05:796,87,0	0/0:13,0:13:33.09:0,33,372	0/0:21,0:21:57.16:0,57,649	0/0:26,0:29:74.72:0,75,805	0/0:19,0:19:51.15:0,51,588	1/1:0,11:11:29.93:274,30,0	1/1:0,27:27:81.04:741,81,0	1/1:3,26:29:75.04:686,75,0	0/0:26,2:28:20.28:0,20,741	0/0:26,2:28:47.76:0,48,803	0/0:10,0:10:27.08:0,27,311
chr10	39073575	.	C	CT	2487.46	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=1.012;DP=548;FS=4.892;HRun=9;HaplotypeScore=130.0281;InbreedingCoeff=0.9413;MQ=65.86;MQ0=12;MQRankSum=-4.959;QD=20.06;ReadPosRankSum=-0.336;VQSLOD=2.2987;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:68.93:0,69,599	0/0:8,0:8:23.98:0,24,205	0/0:43,1:20:31.16:0,31,263	0/0:44,1:17:18.19:0,18,154	0/0:27,0:26:36.13:0,36,423	0/0:15,1:16:6.50:0,7,279	0/0:16,0:16:29.97:0,30,261	1/1:12,11:23:28.59:329,29,0	0/0:17,0:17:38.98:0,39,338	0/0:20,0:20:53.35:0,53,451	0/0:17,0:17:44.77:0,45,389	0/0:16,0:16:42:0,42,370	0/0:16,0:16:44.99:0,45,392	0/0:14,0:15:38:0,38,314	0/0:23,0:23:26.77:0,27,345	0/0:18,0:18:47.94:0,48,408	0/0:26,0:26:61.05:0,61,503	0/0:27,0:27:51.97:0,52,429	1/1:11,12:23:54.08:582,54,0	1/1:5,11:15:33.08:354,33,0	1/1:2,0:2:3.01:33,3,0	0/0:7,0:7:11.98:0,12,104	0/0:8,0:8:23.99:0,24,207	0/0:10,0:10:23.03:0,23,197	0/0:15,0:15:35.99:0,36,313	1/1:9,18:27:42.95:673,43,0	1/1:9,13:22:45:466,45,0	1/1:3,7:10:23.99:242,24,0
chr10	39073592	.	C	CT	2916.09	PASS	AB=0.968;AC=28;AF=0.500;AN=56;BaseQRankSum=-10.112;DP=567;FS=5.620;HRun=9;HaplotypeScore=135.8158;InbreedingCoeff=0.5678;MQ=50.32;MQ0=29;MQRankSum=3.870;QD=10.57;ReadPosRankSum=-0.444;VQSLOD=1.8387;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,23:28:52.09:594,52,0	0/1:9,1:9:7.95:78,0,8	0/0:73,0:18:10.35:0,10,62	0/0:79,0:19:11.96:0,12,53	1/1:29,0:28:29.70:185,30,0	0/0:6,0:11:22.50:0,23,88	0/1:8,0:11:4.58:5,0,39	0/0:23,0:23:0.81:0,1,63	1/1:13,0:13:3.75:52,4,0	1/1:3,21:25:56.99:611,57,0	1/1:3,14:17:16.52:391,17,0	0/1:12,0:13:9.55:12,0,10	0/0:10,0:16:18.37:0,18,107	0/0:3,0:11:18.81:0,19,63	1/1:21,0:21:29.31:192,29,0	1/1:12,0:12:4.39:111,4,0	1/1:24,1:23:21.58:269,22,0	1/1:8,23:32:23.32:469,23,0	0/0:15,0:15:5.62:0,6,68	0/0:8,0:13:13.69:0,14,51	1/1:2,0:2:2.03:6,2,0	1/1:5,0:5:6.01:62,6,0	1/1:8,0:8:5.17:49,5,0	0/0:4,0:5:4.99:0,5,16	0/0:13,0:13:32.97:0,33,286	0/1:17,1:23:24.45:24,0,90	0/0:16,0:20:10.05:0,10,98	0/0:5,0:8:17.72:0,18,68
chr10	39073595	.	T	TC	355.57	PASS	AB=0.963;AC=15;AF=0.268;AN=56;BaseQRankSum=-2.572;DP=566;FS=11.698;HRun=0;HaplotypeScore=143.9162;InbreedingCoeff=-0.0141;MQ=48.17;MQ0=31;MQRankSum=3.054;QD=1.62;ReadPosRankSum=2.438;VQSLOD=2.2784;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:26:2.43:82,0,2	0/0:9,1:9:9.73:0,10,106	0/0:76,0:15:11.15:0,11,158	0/0:86,0:19:13.11:0,13,133	0/0:30,0:29:42.31:0,42,263	0/1:12,0:12:4.63:5,0,195	0/1:10,0:10:11.73:12,0,145	0/1:20,4:23:35.82:36,0,276	0/0:14,0:14:33.75:0,34,239	0/1:24,0:24:29.54:57,0,30	0/1:17,0:17:48.55:49,0,57	0/0:13,0:13:13.95:0,14,183	0/0:17,0:17:32.68:0,33,343	0/0:12,0:12:20.24:0,20,177	0/0:19,1:20:8.46:0,8,142	0/0:12,0:12:7.09:0,7,152	0/0:25,0:23:27.68:0,28,199	0/1:30,0:30:4.97:69,0,5	0/1:14,1:15:0:0,0,256	0/1:11,0:11:26.44:26,0,73	1/1:1,1:2:5.80:32,6,0	1/1:3,0:3:2.49:6,2,0	0/0:6,0:6:5.41:0,5,50	0/0:5,0:5:11.58:0,12,88	0/0:13,0:13:39.06:0,39,503	0/1:21,3:22:56.60:57,0,263	0/1:19,2:20:71.86:72,0,205	0/0:8,0:8:5.13:0,5,150
chr10	39073599	.	TTTC	T	3214.03	PASS	AB=0.949;AC=28;AF=0.500;AN=56;BaseQRankSum=9.539;DP=567;FS=2.352;HRun=0;HaplotypeScore=147.8598;InbreedingCoeff=0.6613;MQ=47.50;MQ0=34;MQRankSum=-6.336;QD=14.54;ReadPosRankSum=-2.605;VQSLOD=3.2862;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:57.15:0,57,926	0/0:10,0:9:27.09:0,27,385	0/0:79,0:14:14.37:0,14,178	0/0:93,0:19:5.86:0,6,183	0/1:29,0:28:3.15:3,0,482	1/1:12,0:12:32.45:294,32,0	1/1:8,2:10:26.96:285,27,0	1/1:19,2:20:21.55:201,22,0	0/0:13,0:13:21.84:0,22,284	0/0:23,0:23:66.11:0,66,1037	0/0:17,0:17:45.96:0,46,667	0/1:13,0:14:18.26:180,0,18	1/1:13,3:16:42.91:412,43,0	1/1:13,1:14:34.40:350,34,0	0/1:16,3:19:50.88:51,0,351	0/0:11,0:11:33.08:0,33,429	0/0:23,1:22:17.62:0,18,617	0/0:34,0:34:51.51:0,52,928	1/1:10,2:12:9.38:217,9,0	1/1:8,1:9:22.35:203,22,0	1/1:2,0:2:3.83:20,4,0	0/0:4,0:3:6.02:0,6,68	0/1:8,0:8:7.15:87,0,7	1/1:5,0:5:11.84:89,12,0	0/0:13,0:13:38.77:0,39,812	1/1:21,2:21:3.71:436,4,0	1/1:16,3:18:45.42:386,45,0	1/1:8,0:8:22.56:208,23,0
chr10	39073600	.	TTCC	T	3152.86	PASS	AB=0.982;AC=32;AF=0.571;AN=56;BaseQRankSum=9.527;DP=566;FS=6.636;HRun=0;HaplotypeScore=147.0566;InbreedingCoeff=0.6689;MQ=46.42;MQ0=33;MQRankSum=-7.596;QD=10.14;ReadPosRankSum=-4.447;VQSLOD=2.0393;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:57.18:0,57,735	0/0:10,0:9:27.07:0,27,301	0/1:77,0:12:0.39:0,0,76	0/0:91,0:18:3.69:0,4,147	0/1:29,0:28:52.82:53,0,314	1/1:12,0:12:29.20:236,29,0	1/1:10,0:10:26.99:213,27,0	1/1:21,0:20:22.84:144,23,0	0/1:12,0:13:28.53:29,0,147	0/0:24,0:24:69.22:0,69,915	0/0:17,0:17:23.20:0,23,491	1/1:10,4:14:31.32:397,31,0	1/1:16,0:16:33.01:270,33,0	1/1:14,0:14:33.07:268,33,0	0/1:19,0:19:16.34:16,0,232	0/0:11,0:11:28.74:0,29,304	0/0:24,0:22:23.45:0,23,371	0/0:31,0:34:51.25:0,51,856	1/1:11,0:11:7.23:151,7,0	1/1:10,0:10:22.32:210,22,0	1/1:2,0:2:5.96:54,6,0	0/0:4,0:3:5.27:0,5,21	1/1:6,2:8:20.88:234,21,0	1/1:5,0:5:12.04:165,12,0	0/0:14,0:14:39.09:0,39,745	1/1:23,0:21:11.01:360,11,0	1/1:19,0:18:41.06:382,41,0	1/1:8,0:8:22.53:178,23,0
chr10	39073602	.	CCTTTTTTCT	C	6619.18	PASS	AB=0.956;AC=31;AF=0.554;AN=56;BaseQRankSum=8.118;DP=548;FS=4.908;HRun=0;HaplotypeScore=174.6738;InbreedingCoeff=0.5643;MQ=44.76;MQ0=33;MQRankSum=-8.743;QD=22.67;ReadPosRankSum=-3.550;VQSLOD=3.7046;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:57.20:0,57,2259	0/0:10,0:9:26.36:0,26,454	0/1:73,0:8:33.40:33,0,87	0/0:93,0:16:20.39:0,20,152	0/0:27,0:26:1.63:0,2,725	1/1:7,5:12:35.95:612,36,0	1/1:7,3:10:29.78:422,30,0	1/1:19,0:18:29.79:304,30,0	0/1:12,0:12:22.31:22,0,264	0/0:24,0:24:69.24:0,69,2135	0/0:16,0:16:41.97:0,42,1163	1/1:10,1:12:33.03:413,33,0	1/1:9,6:15:44.62:755,45,0	1/1:6,8:14:40.34:747,40,0	0/1:19,0:19:55.33:55,0,632	0/0:11,0:11:30.45:0,30,567	0/1:22,0:22:31.35:31,0,537	0/0:34,0:34:58.20:0,58,2398	1/1:13,0:13:26.17:297,26,0	1/1:5,4:9:24.05:462,24,0	1/1:2,0:2:6.02:92,6,0	0/0:4,0:3:3.63:0,4,10	1/1:3,0:5:15.05:278,15,0	1/1:4,1:5:11.67:126,12,0	0/0:13,0:13:39.13:0,39,1513	0/1:15,6:20:78.26:762,0,78	1/1:14,4:18:47.32:775,47,0	1/1:5,3:8:24.07:433,24,0
chr10	39073609	.	TC	T	899.39	PASS	AB=0.963;AC=36;AF=0.643;AN=56;BaseQRankSum=11.210;DP=544;FS=1.982;HRun=1;HaplotypeScore=137.4002;InbreedingCoeff=0.4351;MQ=43.29;MQ0=31;MQRankSum=-5.028;QD=3.31;ReadPosRankSum=1.079;VQSLOD=0.1547;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:63.06:0,63,702	0/1:10,0:9:4.41:4,0,12	0/0:62,2:6:3.83:0,4,39	0/0:92,0:15:15.68:0,16,95	1/1:24,1:24:24.53:111,25,0	1/1:12,0:12:9.04:53,9,0	1/1:10,0:10:0.62:33,1,0	0/1:22,0:21:14.71:28,0,15	1/1:7,0:7:6.02:34,6,0	0/0:25,0:24:67.41:0,67,691	0/0:14,0:13:36.05:0,36,390	1/1:10,0:10:15.33:76,15,0	0/1:13,1:14:8.75:44,0,9	1/1:15,0:15:26.93:122,27,0	1/1:19,1:20:24.62:98,25,0	0/1:9,1:10:7.10:10,0,7	1/1:21,1:20:34.56:135,35,0	0/0:32,0:32:70.09:0,70,770	0/1:14,1:15:23.01:23,0,54	1/1:11,0:11:10.88:45,11,0	1/1:2,0:2:4.59:15,5,0	1/1:3,2:4:7.87:33,8,0	1/1:7,0:7:12:50,12,0	1/1:4,0:4:5.17:20,5,0	0/0:16,1:17:16.64:0,17,436	0/1:21,0:20:51.64:52,0,52	1/1:22,0:21:7.39:65,7,0	1/1:8,0:8:9.26:38,9,0
chr10	39073610	.	CT	C	2272.54	PASS	AB=0.931;AC=37;AF=0.661;AN=56;BaseQRankSum=9.354;DP=545;FS=3.440;HRun=10;HaplotypeScore=132.5296;InbreedingCoeff=0.4651;MQ=43.34;MQ0=30;MQRankSum=-7.159;QD=6.93;ReadPosRankSum=0.658;VQSLOD=1.5935;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:63.10:0,63,665	0/1:9,1:9:22.12:41,0,22	0/1:63,1:6:1.19:1,0,40	0/0:91,0:15:18.92:0,19,113	0/1:24,1:24:33.75:55,0,34	1/1:10,2:12:25.74:198,26,0	1/1:9,2:11:23.78:184,24,0	1/1:10,12:21:17.45:152,17,0	1/1:5,2:7:3.46:19,3,0	0/0:24,0:24:54.83:0,55,568	0/0:14,0:13:33.04:0,33,343	1/1:4,2:10:19.82:119,20,0	1/1:13,2:15:20.83:205,21,0	1/1:12,3:15:38.73:301,39,0	0/1:19,0:19:36.05:36,0,42	0/0:10,0:10:1.42:0,1,28	1/1:21,1:20:19.82:122,20,0	0/0:32,0:32:66.14:0,66,720	0/1:12,3:16:20.45:99,0,20	1/1:8,2:11:26:204,26,0	1/1:0,2:2:6:51,6,0	1/1:4,0:4:1.82:5,2,0	1/1:1,4:7:7.86:67,8,0	1/1:3,1:4:2.98:22,3,0	0/0:16,0:17:31.35:0,31,423	1/1:16,4:19:2.50:215,3,0	1/1:15,7:22:37.12:299,37,0	1/1:8,0:8:2.45:66,2,0
chr10	39073629	.	TC	T	486.59	PASS	AB=0.901;AC=10;AF=0.179;AN=56;BaseQRankSum=5.573;DP=493;FS=1.682;HRun=1;HaplotypeScore=129.7907;InbreedingCoeff=-0.0641;MQ=43.73;MQ0=16;MQRankSum=-4.769;QD=3.08;ReadPosRankSum=-1.013;VQSLOD=-0.3683;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:78.12:0,78,890	0/1:8,1:8:11.99:12,0,74	0/1:29,4:5:10.18:10,0,41	0/0:48,5:8:11.62:0,12,114	0/1:23,1:23:88.14:113,0,88	0/0:11,0:11:22.60:0,23,221	0/0:12,0:12:20.73:0,21,281	0/0:16,1:17:20.13:0,20,181	0/1:8,2:10:25.32:83,0,25	0/0:18,0:17:50.88:0,51,523	0/0:13,0:12:33.06:0,33,373	0/0:10,0:10:16.31:0,16,230	0/0:15,0:15:24.66:0,25,294	0/0:17,0:17:18.60:0,19,309	0/1:16,5:21:77.42:207,0,77	0/1:8,0:8:22.62:23,0,51	0/1:21,2:21:94.29:94,0,139	0/0:36,0:36:92.17:0,92,1046	0/1:22,3:23:73.42:73,0,398	0/0:21,0:21:40.92:0,41,459	0/0:2,0:2:5.99:0,6,50	1/1:4,0:3:2.60:10,3,0	0/0:8,0:8:11.65:0,12,126	0/0:7,0:7:11.97:0,12,97	0/0:18,0:18:54.11:0,54,623	0/0:19,0:19:41.96:0,42,473	0/0:16,2:17:23.84:0,24,302	0/0:9,0:9:19.17:0,19,205
chr10	39073637	.	CT	C	4894.22	PASS	AB=0.955;AC=39;AF=0.696;AN=56;BaseQRankSum=7.358;DP=462;FS=6.757;HRun=9;HaplotypeScore=107.6229;InbreedingCoeff=0.6662;MQ=44.58;MQ0=10;MQRankSum=-5.247;QD=16.99;ReadPosRankSum=-0.037;VQSLOD=4.2668;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,1:30:44.68:0,45,727	0/1:8,0:7:10.81:46,0,11	0/0:20,0:2:1.25:0,1,3	0/0:39,0:7:8.69:0,9,74	1/1:18,6:23:9:275,9,0	1/1:3,10:13:35.97:320,36,0	1/1:7,10:17:45.02:411,45,0	1/1:8,6:14:11.69:109,12,0	0/1:10,0:10:7.67:49,0,8	0/0:21,0:20:39.12:0,39,449	0/0:13,0:12:30.03:0,30,315	1/1:0,10:10:27.01:247,27,0	1/1:2,11:13:33.02:301,33,0	1/1:3,14:17:41.93:367,42,0	1/1:14,5:19:38.13:325,38,0	1/1:4,2:6:7.75:59,8,0	0/1:16,3:18:3.89:163,0,4	0/0:33,0:35:86.86:0,87,929	1/1:9,15:22:44.99:405,45,0	1/1:2,24:26:56.93:505,57,0	1/1:0,2:2:6:55,6,0	1/1:0,4:3:3:27,3,0	1/1:0,7:7:15.01:137,15,0	1/1:2,6:8:12.01:110,12,0	0/0:15,0:16:36.05:0,36,400	1/1:7,14:21:24.67:412,25,0	1/1:7,11:18:39:351,39,0	1/1:0,8:8:24.01:220,24,0
chr10	39073727	.	CT	C	3500.25	PASS	AB=0.882;AC=37;AF=0.661;AN=56;BaseQRankSum=4.585;DP=415;FS=2.787;HRun=12;HaplotypeScore=79.9610;InbreedingCoeff=0.9226;MQ=61.44;MQ0=1;MQRankSum=-4.538;QD=13.51;ReadPosRankSum=3.056;VQSLOD=4.2682;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:81.01:0,81,773	1/1:3,3:6:11.94:93,12,0	0/0:23,0:11:18.46:0,18,161	0/0:15,0:14:17.06:0,17,145	1/1:12,10:22:35.38:255,35,0	1/1:5,6:12:22.93:165,23,0	1/1:5,9:14:26.85:209,27,0	1/1:7,11:17:29.82:228,30,0	1/1:3,6:9:20.89:160,21,0	0/0:17,0:17:36.05:0,36,347	0/0:15,0:15:36.02:0,36,355	0/0:12,0:12:19.37:0,19,109	1/1:2,7:9:20.77:150,21,0	1/1:5,2:6:11.92:91,12,0	1/1:8,7:15:29.63:213,30,0	1/1:2,6:8:20.86:156,21,0	1/1:8,14:23:43.83:336,44,0	0/0:23,0:23:48.05:0,48,467	1/1:6,6:12:14.85:116,15,0	1/1:14,3:17:23.46:162,23,0	1/1:5,10:15:35.74:269,36,0	1/1:3,9:13:7.82:160,8,0	0/0:12,0:12:24.32:0,24,129	0/0:10,0:10:20.21:0,20,108	0/1:12,2:15:1.65:2,0,311	1/1:6,9:16:29.76:226,30,0	1/1:5,9:13:29.87:232,30,0	1/1:3,11:14:35.85:278,36,0
chr10	39073739	.	T	TA	612.21	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=0.103;DP=416;FS=2.481;HRun=3;HaplotypeScore=96.3742;InbreedingCoeff=0.9605;MQ=71.49;MQ0=2;MQRankSum=-1.481;QD=19.13;ReadPosRankSum=-1.276;VQSLOD=2.9975;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:63.98:0,64,709	0/0:5,0:5:11.73:0,12,69	0/0:25,0:14:25.65:0,26,191	0/0:20,0:19:21.75:0,22,145	0/0:18,0:18:28.35:0,28,171	0/0:15,0:14:41.15:0,41,251	0/0:15,0:15:38.06:0,38,224	0/0:18,0:18:38.32:0,38,247	0/0:14,0:14:35.36:0,35,226	0/0:14,0:14:31.12:0,31,297	0/0:17,0:17:43.90:0,44,460	1/1:6,3:9:21.46:219,21,0	0/0:11,0:11:20.58:0,21,128	0/0:8,0:7:16.49:0,16,87	0/0:18,0:18:38.21:0,38,235	0/0:8,0:8:17.56:0,18,104	0/0:23,0:23:61.94:0,62,401	0/0:18,0:18:42.05:0,42,456	0/0:13,0:13:27.43:0,27,196	0/0:9,0:9:11.31:0,11,61	0/0:15,0:15:37.91:0,38,227	0/0:11,0:11:23.09:0,23,131	1/1:3,4:9:20.96:221,21,0	1/1:7,6:14:32.81:313,33,0	0/0:16,0:16:35.42:0,35,400	0/0:17,0:17:46.41:0,46,278	0/0:14,0:13:26.33:0,26,167	0/0:14,0:14:40.58:0,41,243
chr10	39073774	.	C	CT	11588.95	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=9.949;DP=439;FS=4.717;HRun=1;HaplotypeScore=78.2755;InbreedingCoeff=0.9762;MQ=89.73;MQ0=0;MQRankSum=-9.368;QD=39.42;ReadPosRankSum=1.887;VQSLOD=5.6094;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,108,1462	1/1:0,2:3:9:110,9,0	0/0:24,0:22:60.17:0,60,792	0/0:23,0:22:57.08:0,57,744	1/1:1,11:13:36.09:519,36,0	1/1:1,16:16:45.15:675,45,0	1/1:1,16:17:45.12:645,45,0	1/1:1,21:22:57.19:865,57,0	1/1:0,12:12:33.11:496,33,0	0/0:11,0:11:27.09:0,27,378	0/0:20,0:20:54.17:0,54,738	1/1:0,12:12:36.12:542,36,0	1/1:1,8:9:21.07:317,21,0	1/1:0,11:11:33.11:490,33,0	1/1:0,20:21:60.14:876,60,0	1/1:3,4:7:15.05:226,15,0	1/1:1,26:27:75.23:1109,75,0	0/0:14,0:14:39.13:0,39,545	1/1:1,13:14:36.12:535,36,0	1/1:2,13:15:45.05:613,45,0	1/1:0,24:24:60.20:893,60,0	1/1:0,7:7:18.06:265,18,0	1/1:0,7:7:21.07:319,21,0	1/1:0,20:21:57.15:812,57,0	0/0:15,0:15:45.14:0,45,613	1/1:1,19:19:12.21:722,12,0	1/1:1,8:9:24.05:337,24,0	1/1:2,4:6:18.01:225,18,0
chr10	39073858	.	TTG	T	1959	PASS	AB=0.779;AC=40;AF=0.952;AN=42;BaseQRankSum=2.111;DP=411;FS=1.682;HRun=0;HaplotypeScore=123.3921;InbreedingCoeff=-0.0785;MQ=54.79;MQ0=6;MQRankSum=-1.429;QD=6.66;ReadPosRankSum=-0.419;VQSLOD=3.4813;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:21,25:45:2.58:436,3,0	1/1:1,0:4:8.52:42,9,0	./.	./.	1/1:8,0:14:5.68:28,6,0	1/1:5,0:11:14.16:69,14,0	1/1:9,0:14:11.36:56,11,0	./.	1/1:5,0:7:2.84:14,3,0	1/1:8,8:16:21.49:215,21,0	1/1:4,9:13:21.06:234,21,0	1/1:5,0:12:14.20:70,14,0	1/1:5,0:9:14.16:69,14,0	./.	1/1:7,0:18:20.36:98,20,0	1/1:5,0:14:25.57:126,26,0	./.	0/1:6,9:15:15.97:179,0,16	1/1:4,0:5:2.84:14,3,0	1/1:12,0:17:8.52:42,9,0	./.	1/1:1,0:10:11.36:56,11,0	1/1:2,0:8:5.68:28,6,0	./.	0/1:6,1:14:21.18:21,0,105	1/1:11,0:17:16.70:79,17,0	1/1:9,0:19:28.41:139,28,0	1/1:1,0:3:8.52:42,9,0
chr10	39073952	.	T	TGA	1422.98	PASS	AB=0.931;AC=30;AF=0.577;AN=52;BaseQRankSum=-1.732;DP=522;FS=0.795;HRun=0;HaplotypeScore=131.2863;InbreedingCoeff=-0.1749;MQ=51.43;MQ0=7;MQRankSum=1.838;QD=3.30;ReadPosRankSum=0.488;VQSLOD=2.7031;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:34,1:35:27.49:312,27,0	0/1:8,2:11:19.09:78,0,19	./.	0/1:19,0:10:0:0,0,0	0/1:21,1:22:26.99:39,0,27	1/1:31,0:30:11.81:99,12,0	1/1:17,0:16:3:26,3,0	0/1:39,0:38:15.10:15,0,26	1/1:12,5:18:10.76:176,11,0	1/1:23,0:20:10.29:83,10,0	0/0:15,0:15:2.21:0,2,11	0/0:14,0:14:20.62:0,21,187	0/1:15,0:15:24.18:24,0,26	0/1:10,0:9:0:0,0,0	0/1:19,2:22:32.48:91,0,32	0/1:10,1:11:52.46:70,0,52	0/1:13,4:17:48.70:123,0,49	0/0:11,0:10:2.74:0,3,12	./.	1/1:15,1:16:9.03:113,9,0	0/1:19,1:18:26.88:37,0,27	1/1:12,0:11:3.01:33,3,0	0/0:14,1:17:2.84:0,3,14	0/1:30,1:29:14.65:15,0,264	0/1:11,2:14:8.11:39,0,8	0/1:25,1:25:99:121,0,107	0/1:10,3:12:35.87:36,0,56	1/1:4,1:5:1.29:42,1,0
chr10	39073986	.	AGAGAGAGGAGAGAGAG	A	2580.10	PASS	AB=0.997;AC=29;AF=0.558;AN=52;BaseQRankSum=-1.426;DP=472;FS=0.662;HRun=0;HaplotypeScore=171.0435;InbreedingCoeff=-0.2434;MQ=40.59;MQ0=46;MQRankSum=0.317;QD=6.32;ReadPosRankSum=-1.254;VQSLOD=2.6641;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:42,0:35:99:114,0,1452	0/1:9,0:9:16.96:150,0,17	./.	./.	0/1:22,0:18:26.06:39,0,26	1/1:26,0:25:9.63:226,10,0	1/1:19,0:13:8.95:170,9,0	0/1:25,0:20:26.37:57,0,26	1/1:16,0:15:6.64:168,7,0	0/1:20,0:17:69:69,0,321	0/0:11,0:11:2.47:0,2,118	0/0:16,0:11:24.96:0,25,382	0/1:10,0:10:29.80:95,0,30	0/1:16,0:15:0.02:0,0,0	0/1:23,1:24:7.38:163,0,7	0/1:9,0:9:49.45:144,0,49	0/1:16,0:16:80.31:220,0,80	0/0:8,0:7:5.26:0,5,99	1/1:12,0:11:7.43:128,7,0	1/1:15,0:13:12.04:179,12,0	0/1:16,0:13:32.26:32,0,117	1/1:7,13:17:2.99:24,3,0	0/0:16,0:14:4.72:0,5,18	0/1:30,0:17:14.64:15,0,515	0/1:12,0:12:35.69:36,0,131	0/1:25,0:22:99:195,0,103	0/1:11,0:10:52.31:181,0,52	1/1:13,0:13:13.38:333,13,0
chr10	39073988	.	AGAGAGGAGAGAGAG	A	2131.66	PASS	AB=0.996;AC=31;AF=0.596;AN=52;BaseQRankSum=0.392;DP=463;FS=0.000;HRun=0;HaplotypeScore=155.5028;InbreedingCoeff=-0.1835;MQ=40.14;MQ0=47;MQRankSum=-0.845;QD=5.58;ReadPosRankSum=-1.017;VQSLOD=2.1852;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:41,0:35:82.91:83,0,1422	0/1:9,0:9:42.87:85,0,43	./.	./.	0/1:21,0:17:6.91:7,0,36	1/1:25,0:25:12.50:302,12,0	1/1:19,0:13:9.03:214,9,0	0/1:24,0:19:32.57:57,0,33	1/1:16,0:15:5.68:39,6,0	0/1:18,0:15:99:213,0,280	0/1:10,0:10:31.96:32,0,87	0/0:15,0:10:24.97:0,25,406	1/1:8,1:9:12.29:166,12,0	1/1:5,9:13:1.55:4,2,0	0/1:24,0:24:54.33:74,0,54	0/1:9,0:9:79.79:80,0,80	0/1:15,0:15:81.62:109,0,82	0/1:7,0:6:2.02:2,0,74	1/1:11,0:10:7.38:128,7,0	1/1:14,0:12:7.47:82,7,0	0/1:15,0:12:0.77:1,0,130	1/1:19,0:17:3.01:61,3,0	0/0:18,0:15:5.77:0,6,33	0/0:31,0:18:20.61:0,21,650	0/1:12,0:12:3.61:4,0,107	0/1:23,0:20:99:111,0,160	0/1:11,0:10:80.34:149,0,80	0/1:12,0:12:16.19:286,0,16
chr10	39073990	.	AGAG	A	1504.10	PASS	AB=0.979;AC=28;AF=0.519;AN=54;BaseQRankSum=1.058;DP=467;FS=2.051;HRun=0;HaplotypeScore=104.2770;InbreedingCoeff=-0.1913;MQ=39.60;MQ0=51;MQRankSum=-2.087;QD=4.22;ReadPosRankSum=-4.624;VQSLOD=-0.0737;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:42,0:35:32.69:33,0,519	0/1:9,0:9:24.30:24,0,28	./.	0/0:19,0:2:0.89:0,1,2	0/0:19,0:16:5.34:0,5,48	1/1:19,6:24:13.12:203,13,0	1/1:18,1:13:9.50:109,9,0	0/0:24,0:19:20.64:0,21,112	0/0:16,0:15:9.77:0,10,29	0/1:16,0:13:92.93:162,0,93	1/1:7,2:9:6.02:88,6,0	0/1:15,0:10:49.38:49,0,329	1/1:8,2:9:11.11:216,11,0	1/1:13,1:13:2.81:38,3,0	0/1:28,0:25:58.75:59,0,91	0/1:9,0:8:23.94:24,0,135	0/1:14,0:14:16.86:17,0,61	0/1:4,3:6:32.73:45,0,33	0/1:11,0:10:9.35:69,0,9	0/1:15,0:13:24.31:48,0,24	0/0:16,0:12:10.61:0,11,121	1/1:20,0:17:3.01:41,3,0	1/1:17,0:14:5.79:178,6,0	0/1:33,0:20:51.42:51,0,544	0/0:12,0:12:8.01:0,8,59	0/1:22,0:18:55.78:56,0,241	0/1:9,0:9:61.90:62,0,120	0/1:12,0:12:48.55:95,0,49
chr10	39074001	.	AG	A	1034.81	PASS	AB=0.795;AC=16;AF=0.296;AN=54;BaseQRankSum=0.342;DP=434;FS=0.627;HRun=2;HaplotypeScore=85.7824;InbreedingCoeff=-0.2627;MQ=43.44;MQ0=55;MQRankSum=0.320;QD=4.70;ReadPosRankSum=-1.521;VQSLOD=-0.0387;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:28:53.74:0,54,762	0/1:5,4:9:86.92:131,0,87	0/0:13,2:3:3.01:0,3,44	0/0:34,3:9:13.17:0,13,93	0/1:9,5:11:26.94:102,0,27	1/1:18,4:21:7.95:105,8,0	0/1:11,11:15:25.71:67,0,26	0/1:13,4:12:91.56:92,0,263	0/1:12,1:12:0.61:1,0,93	0/0:9,0:8:14.88:0,15,190	0/0:7,0:6:6.01:0,6,70	0/0:16,0:11:27.08:0,27,369	0/0:7,0:6:1.84:0,2,109	0/1:12,0:11:0.02:0,0,0	0/1:9,10:16:59.64:99,0,60	0/1:8,3:10:53.68:54,0,157	0/0:11,0:10:2.85:0,3,186	0/0:5,0:3:6.02:0,6,75	0/1:6,3:8:62.67:63,0,191	0/1:8,8:13:64.09:119,0,64	0/1:17,1:14:55.71:56,0,74	./.	0/0:17,0:14:21.07:0,21,275	0/0:30,0:19:45.11:0,45,620	0/0:5,0:5:5.57:0,6,89	0/1:14,1:9:60.01:60,0,196	0/1:7,2:9:99:103,0,110	0/1:9,5:14:99:131,0,195
chr10	39074002	.	G	GA	1392.91	PASS	AB=0.952;AC=17;AF=0.315;AN=54;BaseQRankSum=-0.859;DP=442;FS=0.619;HRun=1;HaplotypeScore=86.0852;InbreedingCoeff=-0.2980;MQ=43.56;MQ0=55;MQRankSum=1.049;QD=5.93;ReadPosRankSum=-0.894;VQSLOD=-0.0122;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,1:28:53.26:0,53,715	0/1:9,0:9:79.44:131,0,79	0/0:15,0:4:3:0,3,42	0/0:36,1:9:13.04:0,13,88	0/1:14,0:11:26.80:102,0,27	1/1:20,2:21:8.46:142,8,0	0/1:20,0:13:25.71:67,0,26	0/1:18,0:13:99:129,0,251	0/1:12,1:12:37.81:38,0,77	0/0:10,0:9:14.88:0,15,176	0/0:7,0:6:6.02:0,6,80	0/0:16,0:11:27.08:0,27,350	0/0:7,0:6:11.76:0,12,141	0/1:13,0:12:0.02:0,0,0	0/1:19,0:16:51.90:99,0,52	0/1:9,2:10:54.75:55,0,144	0/1:12,0:11:38.67:39,0,184	0/0:5,0:3:6.02:0,6,82	0/1:9,0:8:99:100,0,180	0/1:15,2:14:59.23:192,0,59	0/1:14,5:15:63.85:122,0,64	./.	0/0:17,0:14:21.02:0,21,261	0/0:29,1:19:45.09:0,45,567	0/0:6,0:6:5.50:0,5,83	0/1:16,0:10:59.96:60,0,184	0/1:9,0:9:99:103,0,100	0/1:11,3:14:99:168,0,174
chr10	39076911	.	TG	T	5774.67	PASS	AB=0.905;AC=17;AF=0.304;AN=56;BaseQRankSum=11.972;DP=601;FS=0.697;HRun=4;HaplotypeScore=59.0601;InbreedingCoeff=0.9113;MQ=81.14;MQ0=0;MQRankSum=-6.635;QD=28.73;ReadPosRankSum=2.677;VQSLOD=4.4657;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,41:43:99:1438,120,0	0/0:6,0:6:15.05:0,15,209	0/0:18,0:18:51.16:0,51,691	0/0:21,0:21:57.15:0,57,774	0/0:17,0:17:45.15:0,45,630	1/1:1,22:23:57.17:684,57,0	1/1:1,26:27:78.24:936,78,0	0/0:26,0:26:72.23:0,72,979	0/0:24,0:24:69.23:0,69,966	1/1:3,15:18:39.12:468,39,0	1/1:0,10:10:27.04:324,27,0	0/0:22,0:22:63.19:0,63,845	1/1:1,19:20:48.15:576,48,0	1/1:2,20:22:57.17:684,57,0	0/0:17,0:17:48.16:0,48,669	0/0:22,0:22:57.17:0,57,779	0/0:41,0:41:99:0,123,1720	1/1:0,19:19:54.17:648,54,0	0/0:23,0:23:63.18:0,63,848	0/0:12,0:12:30.10:0,30,420	0/0:44,0:44:99:0,126,1743	0/0:21,0:21:57.16:0,57,761	0/0:11,0:11:24.07:0,24,318	0/0:35,0:35:99:0,102,1373	0/0:16,0:16:48.15:0,48,655	0/1:17,2:19:17.84:18,0,618	0/0:19,0:19:57.18:0,57,781	0/0:5,0:5:15.05:0,15,210
chr10	39077489	.	T	TAAACACACACACACACAC	4137.82	PASS	AB=0.990;AC=22;AF=0.440;AN=50;BaseQRankSum=7.893;DP=455;FS=21.557;HRun=0;HaplotypeScore=232.4172;InbreedingCoeff=-0.6512;MQ=51.97;MQ0=8;MQRankSum=-3.040;QD=11.24;ReadPosRankSum=-5.118;VQSLOD=-0.0680;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:18,0:17:61.91:71,0,62	1/1:7,0:7:3:25,3,0	0/0:29,0:14:23.96:0,24,229	0/0:32,0:15:8.03:0,8,184	0/1:19,0:19:52.95:53,0,55	0/1:15,0:14:76.59:224,0,77	0/1:25,0:24:93.25:325,0,93	0/1:25,0:23:99:412,0,118	0/1:19,0:19:57.39:274,0,57	0/1:16,0:14:36.67:337,0,37	0/1:8,0:8:35.89:138,0,36	./.	0/0:20,0:20:2.74:0,3,147	0/1:17,0:16:59.18:93,0,59	0/1:26,0:26:99:196,0,142	0/1:16,0:16:73.76:235,0,74	0/1:17,0:17:66.84:303,0,67	0/1:12,1:14:63.87:251,0,64	0/1:12,0:12:43.87:375,0,44	0/1:10,0:10:0:0,0,0	0/1:36,0:36:11.06:11,0,78	0/1:17,0:16:77.03:128,0,77	./.	./.	0/1:19,0:19:85.84:129,0,86	0/1:19,0:19:99:333,0,103	0/1:11,0:11:53.29:223,0,53	0/0:6,0:6:2.94:0,3,23
chr10	39077491	.	A	AACACACACACACAC	10947.71	PASS	AC=46;AF=0.958;AN=48;BaseQRankSum=-4.433;DP=577;FS=5.669;HRun=0;HaplotypeScore=254.1104;InbreedingCoeff=0.2767;MQ=47.79;MQ0=9;MQRankSum=-0.469;QD=21.26;ReadPosRankSum=2.799;VQSLOD=3.2282;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:21:5.70:135,6,0	1/1:9,0:9:6.02:233,6,0	0/0:30,0:14:5.75:0,6,43	./.	1/1:25,0:24:5.78:112,6,0	1/1:22,0:21:23.37:773,23,0	1/1:34,0:32:28.08:978,28,0	1/1:37,0:34:32.30:784,32,0	1/1:19,2:22:15.05:670,15,0	1/1:18,0:21:31.78:757,32,0	1/1:15,0:15:9.03:295,9,0	./.	1/1:23,0:23:6.02:154,6,0	1/1:18,0:19:0.45:138,0,0	1/1:25,4:29:7.74:331,8,0	1/1:19,0:23:12.04:396,12,0	1/1:17,0:19:12.04:496,12,0	1/1:18,0:17:9.03:353,9,0	1/1:15,0:15:21.06:717,21,0	1/1:13,0:13:6.01:133,6,0	1/1:42,0:42:6:76,6,0	1/1:16,1:18:6:223,6,0	./.	./.	1/1:17,3:22:2.93:302,3,0	1/1:31,0:31:54.17:1664,54,0	1/1:17,0:17:22.63:719,23,0	1/1:13,0:13:19.26:508,19,0
chr10	39077924	.	GAAAT	G	2135.66	PASS	AC=26;AF=0.619;AN=42;BaseQRankSum=0.313;DP=272;FS=3.767;HRun=0;HaplotypeScore=46.1057;InbreedingCoeff=0.6324;MQ=54.36;MQ0=4;MQRankSum=0.658;QD=13.96;ReadPosRankSum=3.368;VQSLOD=2.4948;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:11,8:19:24.08:370,24,0	0/0:3,0:3:6.02:0,6,140	./.	./.	1/1:7,1:8:3.01:46,3,0	1/1:7,7:14:21.07:323,21,0	1/1:4,2:6:3.01:46,3,0	0/0:33,0:32:11.95:0,12,123	1/1:6,3:9:9.03:139,9,0	0/0:9,0:9:9.03:0,9,208	0/0:6,0:6:6.02:0,6,141	1/1:7,0:7:3.01:46,3,0	1/1:6,0:7:3:28,3,0	1/1:5,0:7:6.01:56,6,0	1/1:7,3:10:6.02:92,6,0	./.	1/1:14,16:30:45.15:693,45,0	1/1:5,7:12:21.07:311,21,0	0/0:6,0:8:6.02:0,6,105	0/0:4,0:5:3.01:0,3,52	./.	./.	1/1:10,1:11:3.01:46,3,0	./.	1/1:9,4:13:6.02:92,6,0	0/0:3,0:7:9.03:0,9,163	0/0:7,0:10:9.03:0,9,155	./.
chr10	39078162	.	CGCAAACACTTTCAATTAAG	C	19089.06	PASS	AB=0.516;AC=25;AF=0.463;AN=54;BaseQRankSum=15.257;DP=388;FS=0.000;HRun=0;HaplotypeScore=216.5849;InbreedingCoeff=0.9022;MQ=88.37;MQ0=0;MQRankSum=-12.941;QD=132.56;ReadPosRankSum=3.180;VQSLOD=4.4529;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,129,10956	./.	0/0:14,0:14:42.13:0,42,2519	0/0:19,0:19:57.17:0,57,3481	1/1:0,10:10:21.07:957,21,0	0/0:14,0:14:42.14:0,42,3598	0/0:30,0:30:90.31:0,90,6790	1/1:0,12:12:36.09:1624,36,0	1/1:0,11:11:24.08:1340,24,0	0/0:13,0:13:36.12:0,36,2989	0/0:10,0:10:30.10:0,30,2571	0/0:22,0:22:66.23:0,66,5405	0/0:16,0:16:48.16:0,48,4273	0/0:21,0:21:63.22:0,63,5390	1/1:0,12:12:36.12:2009,36,0	1/1:0,18:18:51.18:2849,51,0	1/1:0,12:12:27.09:1375,27,0	0/0:7,0:7:21.07:0,21,1947	1/1:0,12:12:36.12:1832,36,0	1/1:0,10:10:27.09:1303,27,0	1/1:0,10:10:18.06:1005,18,0	1/1:0,3:3:6.02:205,6,0	0/0:7,0:7:21.07:0,21,1597	0/0:23,0:23:69.24:0,69,5689	0/0:5,0:5:15.05:0,15,1210	0/1:1,15:16:73.34:2247,0,73	1/1:0,11:11:26.30:1507,26,0	1/1:1,6:7:15.05:835,15,0
chr10	39078522	.	C	CAT	2615.12	PASS	AC=22;AF=0.407;AN=54;BaseQRankSum=-8.297;DP=243;FS=3.062;HRun=0;HaplotypeScore=30.7511;InbreedingCoeff=0.8602;MQ=63.37;MQ0=4;MQRankSum=0.771;QD=28.74;ReadPosRankSum=3.092;VQSLOD=4.5472;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,17:21:39.13:658,39,0	0/0:1,0:1:3.01:0,3,39	0/0:4,0:2:3.01:0,3,38	0/0:9,0:7:14.72:0,15,126	0/0:13,0:13:26.99:0,27,310	1/1:3,5:8:9.03:152,9,0	1/1:3,3:7:6.02:101,6,0	0/0:18,0:18:42.12:0,42,506	0/0:8,0:8:21.07:0,21,270	1/1:0,6:7:21.05:304,21,0	1/1:1,5:6:12.04:202,12,0	1/1:0,5:5:12.04:202,12,0	1/1:1,7:8:15.05:253,15,0	1/1:1,4:5:6.02:101,6,0	0/0:5,0:5:15.02:0,15,165	0/0:6,0:6:18.05:0,18,218	0/0:17,0:17:45.15:0,45,575	1/1:1,15:16:33.11:555,33,0	0/0:10,0:9:21.06:0,21,259	0/0:15,0:15:27.09:0,27,347	0/0:6,0:6:18.06:0,18,231	./.	1/1:0,4:4:12.04:202,12,0	1/1:1,3:4:6.02:88,6,0	0/0:15,0:15:42.09:0,42,520	0/0:8,0:8:24.08:0,24,308	0/0:14,0:14:42.14:0,42,539	0/0:3,0:3:9.03:0,9,116
chr10	39079045	.	GAAGAGAGATGCCC	G	11956.18	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=14.416;DP=559;FS=1.326;HRun=0;HaplotypeScore=217.6162;InbreedingCoeff=0.9885;MQ=82.38;MQ0=0;MQRankSum=-15.510;QD=79.18;ReadPosRankSum=2.668;VQSLOD=4.8341;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,17:25:33.11:1277,33,0	0/0:8,0:8:24.08:0,24,1506	0/0:23,0:24:61.45:0,61,2927	0/0:18,0:18:51.01:0,51,2559	0/0:11,0:11:33.11:0,33,2087	1/1:2,14:16:39.13:1545,39,0	1/1:6,21:27:48.16:1872,48,0	0/0:25,0:25:69.24:0,69,4022	0/0:22,0:22:66.23:0,66,3752	1/1:3,8:11:24.08:951,24,0	1/1:1,10:11:24.08:726,24,0	0/0:32,0:32:90.31:0,90,5716	1/1:5,19:24:54.19:2139,54,0	1/1:2,14:16:39.13:1545,39,0	0/0:18,0:18:51.15:0,51,2820	0/0:14,0:14:39.13:0,39,2458	0/0:36,0:36:99:0,105,6508	1/1:5,16:21:48.16:1901,48,0	0/0:12,0:12:36.12:0,36,1930	0/0:18,0:18:48.16:0,48,3128	0/0:45,0:45:99:0,132,8253	0/0:16,0:16:42.14:0,42,2735	0/0:3,0:3:9.03:0,9,590	0/0:42,0:42:99:0,114,7088	0/0:13,0:13:36.12:0,36,2284	0/0:22,0:22:63.21:0,63,3699	0/0:22,0:22:60.21:0,60,3704	0/0:7,0:7:21.07:0,21,1357
chr10	39080358	.	T	TA	4387.39	PASS	AB=1.000;AC=37;AF=0.661;AN=56;BaseQRankSum=-1.873;DP=545;FS=3.078;HRun=13;HaplotypeScore=70.1519;InbreedingCoeff=0.8443;MQ=75.79;MQ0=1;MQRankSum=0.965;QD=11.34;ReadPosRankSum=-1.428;VQSLOD=4.2981;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:50.49:0,50,349	1/1:2,0:14:29.75:150,30,0	1/1:31,1:19:0.47:1,0,0	0/1:25,0:17:14.09:14,0,25	1/1:13,3:33:52.40:307,52,0	0/0:22,0:22:53.44:0,53,364	0/0:13,0:13:23.78:0,24,164	1/1:7,21:28:20.07:461,20,0	1/1:5,0:20:34.17:175,34,0	0/0:20,0:20:38.61:0,39,267	0/0:22,0:22:44.54:0,45,308	1/1:3,10:13:0.44:147,0,0	0/0:16,0:16:34.74:0,35,232	0/0:10,0:12:30.85:0,31,197	1/1:3,0:8:11.36:58,11,0	1/1:4,0:11:17.04:86,17,0	1/1:3,0:23:42.65:216,43,0	0/0:18,0:19:40.27:0,40,268	1/1:6,14:20:39.01:352,39,0	1/1:13,19:33:37.61:470,38,0	1/1:1,13:14:33.04:306,33,0	1/1:6,0:17:22.97:126,23,0	1/1:5,8:14:14.18:161,14,0	1/1:2,18:20:42.05:390,42,0	0/0:1,0:13:22.40:0,22,65	1/1:5,8:14:23.86:208,24,0	1/1:10,25:35:56.85:529,57,0	1/1:2,11:13:9.46:230,9,0
chr10	39081558	.	C	CT	8958.80	PASS	AB=0.867;AC=47;AF=0.839;AN=56;BaseQRankSum=-7.637;DP=526;FS=2.890;HRun=10;HaplotypeScore=46.6571;InbreedingCoeff=0.6062;MQ=64.50;MQ0=9;MQRankSum=-1.248;QD=18.32;ReadPosRankSum=3.394;VQSLOD=5.5134;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,25:27:75.19:800,75,0	1/1:1,7:8:18.05:192,18,0	0/1:50,0:15:8.05:8,0,16	0/1:46,0:13:17.88:18,0,21	1/1:6,16:22:31.52:466,32,0	1/1:1,15:17:38.93:398,39,0	1/1:1,5:6:12.03:125,12,0	1/1:7,19:23:29.47:509,29,0	1/1:3,6:10:20.89:206,21,0	1/1:5,18:23:48.12:510,48,0	1/1:4,13:17:38.09:378,38,0	0/0:17,0:17:41.95:0,42,345	1/1:1,11:12:6.27:264,6,0	1/1:0,7:7:18.05:192,18,0	1/1:3,13:16:39.57:417,40,0	1/1:2,9:12:14.21:186,14,0	1/1:4,25:29:24.17:656,24,0	1/1:3,22:24:54.14:576,54,0	1/1:1,11:12:33.08:352,33,0	0/1:4,8:12:0.58:200,0,1	1/1:2,8:11:21.36:207,21,0	1/1:0,2:2:3.01:32,3,0	0/0:12,0:12:29.96:0,30,246	0/0:7,0:8:16.98:0,17,125	1/1:4,14:18:21.69:367,22,0	1/1:8,25:33:47.53:711,48,0	1/1:0,25:25:68.88:736,69,0	1/1:8,14:21:24.45:455,24,0
chr10	39081760	.	CT	C	5018.39	PASS	AB=0.830;AC=51;AF=0.911;AN=56;BaseQRankSum=-0.061;DP=357;FS=2.129;HRun=11;HaplotypeScore=45.5332;InbreedingCoeff=0.2335;MQ=74.87;MQ0=5;MQRankSum=-0.469;QD=14.34;ReadPosRankSum=2.150;VQSLOD=4.9789;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,29:36:37.37:530,37,0	1/1:0,2:2:2.99:25,3,0	0/1:36,1:22:53.56:54,0,92	0/1:27,1:13:24.67:28,0,25	1/1:0,5:5:14.98:123,15,0	1/1:0,13:14:35:277,35,0	1/1:2,10:12:4.31:153,4,0	1/1:6,14:18:35.94:295,36,0	1/1:1,9:10:26.97:222,27,0	1/1:1,7:8:20.98:172,21,0	1/1:2,12:14:3.95:238,4,0	1/1:3,9:12:23.95:196,24,0	1/1:0,7:7:20.98:172,21,0	1/1:1,4:5:11.99:99,12,0	1/1:3,6:12:21.09:141,21,0	1/1:1,4:5:11.97:99,12,0	1/1:5,20:26:53.91:443,54,0	1/1:2,13:15:29.97:246,30,0	0/1:4,18:22:1.08:401,0,1	1/1:1,5:6:14.98:123,15,0	1/1:0,8:8:17.97:147,18,0	1/1:0,2:2:5.99:49,6,0	1/1:0,5:5:8.59:74,9,0	1/1:4,8:12:17.97:148,18,0	0/0:7,0:7:18.05:0,18,191	1/1:2,11:13:32.95:269,33,0	1/1:2,10:12:29.96:246,30,0	1/1:0,2:2:5.99:49,6,0
chr10	39083964	.	TAGGAGTGGACGCACACTGGGCCTC	T	2279.69	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.914;DP=742;FS=8.430;HRun=0;HaplotypeScore=435.9479;InbreedingCoeff=0.9995;MQ=90.05;MQ0=0;MQRankSum=-5.876;QD=113.98;ReadPosRankSum=2.795;VQSLOD=2.7902;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,144,13166	0/0:11,0:11:33.11:0,33,3331	0/0:33,0:33:96.24:0,96,5397	0/0:26,0:26:74.82:0,75,4900	0/0:23,0:23:69.22:0,69,7126	0/0:17,0:17:48.16:0,48,4370	0/0:41,0:41:99:0,117,10933	0/0:24,0:24:72.24:0,72,5120	0/0:25,0:25:75.24:0,75,7516	0/0:25,0:25:69.24:0,69,6090	0/0:20,0:20:60.21:0,60,5787	0/0:35,0:35:99:0,102,10630	0/0:21,0:21:63.22:0,63,5878	0/0:24,0:24:69.24:0,69,6749	0/0:32,0:32:96.33:0,96,10061	0/0:26,0:26:72.24:0,72,7411	0/0:28,0:27:84.29:0,84,7608	0/0:25,0:25:72.25:0,72,7020	0/0:27,0:27:81.26:0,81,6247	0/0:16,0:16:48.15:0,48,3513	0/0:57,0:57:99:0,166,15751	0/0:22,0:22:63.22:0,63,6619	0/0:16,0:16:48.16:0,48,4893	0/0:36,0:36:99:0,108,10756	1/1:5,15:20:36.12:2374,36,0	0/0:26,0:25:75.26:0,75,7091	0/0:25,0:25:72.23:0,72,7014	0/0:12,0:12:36.11:0,36,3350
chr10	39086234	.	T	TA	951.89	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-7.477;DP=550;FS=0.660;HRun=9;HaplotypeScore=58.4585;InbreedingCoeff=0.8959;MQ=71.53;MQ0=0;MQRankSum=0.727;QD=17.31;ReadPosRankSum=1.897;VQSLOD=3.7086;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,141,1205	0/0:8,0:8:24:0,24,208	0/0:12,0:10:11.74:0,12,92	0/0:11,0:12:23.96:0,24,202	0/0:14,0:14:38.99:0,39,338	0/0:14,0:15:35.01:0,35,290	0/0:25,0:25:62.98:0,63,547	0/0:25,0:25:65.95:0,66,567	0/0:16,0:16:38.99:0,39,339	0/0:21,0:21:62.97:0,63,542	0/0:15,0:15:38.99:0,39,338	1/1:2,12:14:36.10:398,36,0	0/0:16,0:16:41.98:0,42,364	0/0:13,0:13:26.94:0,27,224	0/0:20,0:20:50.98:0,51,440	0/0:20,0:20:56.98:0,57,492	0/0:37,0:37:99:0,102,877	0/0:22,0:21:62.93:0,63,534	0/0:15,0:15:29.98:0,30,260	0/0:15,0:15:35.99:0,36,312	0/0:17,0:19:49.05:0,49,400	0/0:9,0:9:20.99:0,21,182	1/1:4,13:17:1.02:240,1,0	1/1:6,18:24:25.03:445,25,0	0/0:15,0:15:35.98:0,36,312	0/0:21,0:21:59.97:0,60,517	0/0:36,0:36:95.91:0,96,822	0/0:22,0:22:65.99:0,66,573
chr10	39086799	.	T	TA	1281.30	PASS	AB=0.880;AC=17;AF=0.304;AN=56;BaseQRankSum=-3.444;DP=417;FS=0.513;HRun=14;HaplotypeScore=51.1623;InbreedingCoeff=0.3636;MQ=60.52;MQ0=6;MQRankSum=0.098;QD=6.64;ReadPosRankSum=-1.817;VQSLOD=1.5626;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:42:79.51:0,80,494	0/0:3,0:3:5.91:0,6,38	0/1:10,1:5:4.22:4,0,28	0/0:7,0:3:0.44:0,0,1	0/0:18,0:21:27.68:0,28,175	0/0:14,0:15:22.65:0,23,140	0/0:10,1:15:1.31:0,1,119	1/1:6,11:19:6.07:234,6,0	0/0:8,0:8:14.77:0,15,96	0/0:20,0:20:38.32:0,38,250	0/1:11,0:12:3.99:4,0,98	0/1:12,0:12:21.38:21,0,75	0/0:14,0:15:26.51:0,27,172	0/0:10,0:10:14.68:0,15,96	0/0:13,0:13:26.57:0,27,172	0/1:15,0:15:20.31:20,0,118	0/0:20,0:21:40.40:0,40,256	0/1:19,1:24:1.65:2,0,233	0/1:4,2:6:26.53:41,0,27	1/1:14,10:27:34.17:376,34,0	1/1:2,5:7:6:53,6,0	0/0:5,0:5:8.84:0,9,58	0/0:10,0:10:6.43:0,6,84	0/0:3,0:3:5.87:0,6,38	0/0:14,0:15:27.53:0,28,165	1/1:9,21:30:36.67:417,37,0	1/1:5,14:19:10.87:198,11,0	0/1:5,4:10:4.43:78,0,4
chr10	39087711	.	TGATA	T	991.25	PASS	AB=0.811;AC=12;AF=0.273;AN=44;BaseQRankSum=5.512;DP=495;FS=0.000;HRun=0;HaplotypeScore=95.4008;InbreedingCoeff=0.3850;MQ=54.69;MQ0=15;MQRankSum=-0.129;QD=6.40;ReadPosRankSum=3.154;VQSLOD=1.8464;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:2.97:0,3,20	0/0:8,0:8:3.01:0,3,65	./.	./.	0/0:13,0:18:8.06:0,8,110	1/1:7,13:20:21.07:316,21,0	./.	./.	0/0:17,0:17:24.08:0,24,540	0/1:10,0:22:29.27:44,0,29	./.	./.	1/1:10,0:19:12.01:112,12,0	1/1:15,0:22:2.90:28,3,0	0/0:16,0:16:18.06:0,18,394	0/1:19,0:19:24.10:24,0,391	0/0:15,0:15:27.09:0,27,620	0/1:12,0:13:6.74:7,0,20	1/1:7,5:11:15.05:226,15,0	0/0:17,0:16:9.03:0,9,181	0/1:14,14:28:6.50:376,0,7	0/0:20,0:20:18.06:0,18,390	0/0:10,0:16:0:0,0,0	0/0:18,0:18:2.98:0,3,22	0/0:9,0:15:0:0,0,0	0/0:25,0:25:27.09:0,27,545	0/0:12,0:12:15.05:0,15,346	0/0:17,0:14:30.10:0,30,665
chr10	39087730	.	TA	T	512.47	PASS	AB=0.818;AC=4;AF=0.077;AN=52;BaseQRankSum=5.765;DP=458;FS=1.850;HRun=1;HaplotypeScore=74.2410;InbreedingCoeff=-0.0953;MQ=52.55;MQ0=15;MQRankSum=-0.214;QD=8.40;ReadPosRankSum=-0.823;VQSLOD=0.5834;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:16,8:24:99:242,0,407	0/0:5,0:5:15.05:0,15,231	./.	./.	0/0:20,1:18:32.69:0,33,437	0/0:22,0:22:39.81:0,40,437	0/0:14,0:14:27.08:0,27,386	0/0:31,0:26:75.20:0,75,1079	0/0:19,0:19:57.19:0,57,879	0/1:16,0:16:99:178,0,297	0/0:4,2:5:6.02:0,6,92	0/1:6,2:8:65.68:66,0,165	0/0:14,0:14:11.33:0,11,180	0/0:20,0:20:38.94:0,39,561	0/0:15,0:15:45.15:0,45,695	0/0:17,0:17:49.95:0,50,705	0/0:16,0:16:45.15:0,45,701	0/1:8,5:13:99:134,0,287	0/0:17,0:15:39.19:0,39,474	0/0:15,0:14:27.09:0,27,398	0/0:29,0:29:55.49:0,55,633	0/0:21,0:21:48.14:0,48,700	0/0:11,0:11:5.59:0,6,91	0/0:18,0:18:23.64:0,24,330	0/0:16,0:16:30.07:0,30,454	0/0:21,0:21:63.21:0,63,973	0/0:14,0:14:42.14:0,42,661	0/0:21,0:18:48.16:0,48,746
chr10	39088035	.	G	GAGAT	4306.06	PASS	AB=0.933;AC=41;AF=0.759;AN=54;BaseQRankSum=-2.573;DP=677;FS=8.688;HRun=0;HaplotypeScore=186.8597;InbreedingCoeff=0.1839;MQ=60.83;MQ0=5;MQRankSum=1.701;QD=7.57;ReadPosRankSum=0.628;VQSLOD=3.2128;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:34,0:33:10.03:60,0,10	0/1:8,0:7:0:0,0,0	./.	0/0:18,0:17:0:0,0,0	0/0:24,1:24:2:0,2,16	1/1:17,0:17:5.99:65,6,0	1/1:23,0:23:1.82:5,2,0	1/1:37,0:36:4.87:18,5,0	0/1:23,0:23:6.84:60,0,7	1/1:25,0:23:4.88:85,5,0	0/0:12,0:12:0.54:0,1,2	0/1:24,9:29:1.25:889,0,1	1/1:25,0:26:16.29:114,16,0	0/1:21,0:22:13:26,0,13	0/0:31,0:31:1.02:0,1,4	1/1:23,0:21:10.54:92,11,0	1/1:20,0:20:4.28:29,4,0	1/1:19,0:20:11.94:96,12,0	1/1:26,0:25:22.84:267,23,0	1/1:17,0:17:4.55:22,5,0	1/1:22,0:23:8.99:92,9,0	1/1:21,0:24:3.01:46,3,0	1/1:21,6:26:24.07:490,24,0	1/1:27,8:33:39.13:839,39,0	1/1:13,6:19:15.05:353,15,0	1/1:28,0:29:22.23:243,22,0	1/1:22,0:22:4.29:215,4,0	1/1:26,0:27:4.54:201,5,0
chr10	39088076	.	AGAT	A	3814.65	PASS	AB=0.928;AC=31;AF=0.596;AN=52;BaseQRankSum=-0.357;DP=573;FS=3.091;HRun=0;HaplotypeScore=180.0384;InbreedingCoeff=-0.4502;MQ=33.94;MQ0=33;MQRankSum=0.243;QD=7.31;ReadPosRankSum=-3.800;VQSLOD=2.6756;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:14,9:21:9.03:142,9,0	0/1:6,0:5:0.01:1,0,0	./.	./.	1/1:12,11:21:5.49:95,5,0	0/1:12,9:20:71.53:82,0,72	0/1:14,2:16:40.94:41,0,91	0/1:36,0:29:42.59:43,0,898	1/1:8,8:15:15.02:249,15,0	0/1:24,0:20:99:259,0,316	0/1:13,0:10:14.40:14,0,19	0/1:28,2:26:61.61:62,0,454	1/1:6,13:19:26.90:435,27,0	1/1:8,10:17:8.45:145,8,0	0/1:27,0:26:3.61:4,0,8	0/1:12,7:17:3.19:265,0,3	0/1:8,8:14:38.81:155,0,39	0/1:13,3:16:86.93:262,0,87	0/1:23,0:17:99:163,0,397	0/1:17,0:16:25.48:25,0,36	0/1:17,0:16:68.33:123,0,68	1/1:9,8:17:6.02:92,6,0	0/1:22,0:21:90.46:90,0,161	0/1:24,1:21:99:107,0,303	0/0:25,0:22:24.01:0,24,248	0/1:25,3:25:99:674,0,266	0/1:17,0:15:18.66:141,0,19	0/1:33,0:32:99:144,0,194
chr10	39088094	.	G	GGATA	368.44	PASS	AB=0.969;AC=23;AF=0.460;AN=50;BaseQRankSum=-1.218;DP=588;FS=1.067;HRun=0;HaplotypeScore=192.5227;InbreedingCoeff=0.1859;MQ=29.17;MQ0=37;MQRankSum=-2.267;QD=0.96;ReadPosRankSum=-2.105;VQSLOD=2.6277;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:20:0.06:0,0,0	0/0:6,0:5:0.12:0,0,1	0/0:20,0:2:5.98:0,6,68	0/1:17,0:2:0.30:0,0,44	./.	1/1:21,0:20:5.85:45,6,0	./.	1/1:25,0:19:2.97:20,3,0	0/0:15,0:14:0:0,0,0	1/1:23,0:17:10.35:86,10,0	0/1:12,0:9:0:0,0,0	0/1:21,13:27:34.81:35,0,40	0/1:24,0:24:24.68:55,0,25	0/1:24,0:23:0.36:0,0,1	0/1:30,0:29:0.23:0,0,0	1/1:23,0:21:7.15:49,7,0	0/0:15,0:12:0.84:0,1,2	1/1:17,0:17:4.08:82,4,0	1/1:23,0:16:2.95:13,3,0	0/0:14,0:13:2.83:0,3,37	0/0:15,0:14:4.74:0,5,59	1/1:16,0:16:2.98:22,3,0	0/0:21,4:21:2.39:0,2,48	./.	0/0:26,0:23:11.62:0,12,110	0/1:32,0:27:15.49:15,0,64	0/0:15,0:13:2.97:0,3,28	0/1:37,0:35:67.66:71,0,68
chr10	39088109	.	TA	T	2116.99	PASS	AB=0.810;AC=26;AF=0.481;AN=54;BaseQRankSum=1.815;DP=539;FS=2.020;HRun=1;HaplotypeScore=161.4845;InbreedingCoeff=-0.0547;MQ=29.69;MQ0=31;MQRankSum=0.012;QD=5.62;ReadPosRankSum=-0.957;VQSLOD=0.0255;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:18,6:21:2.99:42,3,0	1/1:4,4:7:3.08:8,3,0	0/0:12,0:2:6.02:0,6,96	0/0:11,0:2:6.02:0,6,95	1/1:11,5:14:9.92:128,10,0	0/0:13,8:20:5.59:0,6,95	1/1:11,2:11:3.48:41,3,0	0/1:16,1:8:20.84:21,0,228	0/1:8,9:16:0.92:247,0,1	0/1:13,11:19:99:381,0,293	./.	0/0:34,0:27:28.45:0,28,415	0/1:13,8:21:19.86:238,0,20	0/1:16,8:23:4.17:115,0,4	1/1:22,4:25:3.74:23,4,0	0/1:16,6:20:32.75:83,0,33	0/1:10,2:9:33.68:34,0,54	0/1:13,2:15:48.94:49,0,164	0/1:19,2:14:88.30:88,0,377	0/0:14,2:15:4.42:0,4,53	0/0:15,1:15:8.24:0,8,103	1/1:10,1:11:3.01:39,3,0	0/0:22,0:18:12.04:0,12,184	0/0:17,0:11:5.86:0,6,68	1/1:12,13:22:13.19:171,13,0	0/1:21,8:22:99:263,0,311	0/1:16,0:14:15.98:16,0,136	0/1:23,13:34:99:291,0,104
chr10	39088129	.	AGAT	A	1568.07	PASS	AB=0.920;AC=15;AF=0.278;AN=54;BaseQRankSum=1.479;DP=544;FS=9.172;HRun=0;HaplotypeScore=160.4299;InbreedingCoeff=-0.0593;MQ=36.46;MQ0=26;MQRankSum=-1.824;QD=5.46;ReadPosRankSum=-3.108;VQSLOD=1.6807;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:24:8.97:0,9,176	0/0:10,0:9:0.19:0,0,23	0/0:4,0:2:3.01:0,3,42	./.	0/0:16,0:15:21.07:0,21,442	0/1:22,0:21:21.61:68,0,22	0/1:16,0:11:2.95:3,0,35	0/0:20,0:13:36.07:0,36,377	0/0:17,0:17:26.64:0,27,579	0/1:16,17:30:99:942,0,124	1/1:3,10:11:9.03:146,9,0	0/1:37,0:32:15.87:16,0,64	0/0:19,0:19:29.99:0,30,825	0/0:24,0:23:23.73:0,24,531	0/0:22,0:22:5.32:0,5,62	0/0:22,0:20:20.20:0,20,416	0/1:10,0:8:30.24:83,0,30	0/1:12,7:19:83.39:219,0,83	0/1:15,0:11:0.19:0,0,185	0/0:23,0:22:20.66:0,21,149	0/1:16,0:15:1.27:1,0,21	0/0:5,0:4:6.02:0,6,133	0/1:23,0:20:11.69:12,0,30	1/1:21,0:15:7.44:20,7,0	0/1:14,8:20:99:118,0,145	0/0:31,0:23:31.11:0,31,555	0/0:11,0:9:7.79:0,8,198	0/1:40,0:38:85.12:85,0,130
chr10	39088137	.	GATA	G	494.75	PASS	AB=0.900;AC=12;AF=0.222;AN=54;BaseQRankSum=-0.431;DP=507;FS=7.983;HRun=0;HaplotypeScore=154.5204;InbreedingCoeff=0.0347;MQ=38.97;MQ0=25;MQRankSum=2.302;QD=2.29;ReadPosRankSum=0.131;VQSLOD=2.2275;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:23:11.74:0,12,294	0/0:10,0:10:18.06:0,18,393	0/0:3,0:1:2.98:0,3,21	./.	0/0:14,0:13:24.08:0,24,553	0/1:16,5:20:15.64:146,0,16	1/1:11,4:10:3.38:25,3,0	0/0:23,0:15:41.86:0,42,423	0/0:14,0:14:30.10:0,30,702	0/0:34,0:31:93.14:0,93,1245	0/0:14,0:12:8.93:0,9,103	0/1:37,0:33:30.16:30,0,120	0/0:18,0:18:45.07:0,45,1013	0/0:20,0:20:26.29:0,26,646	0/0:17,0:17:5.18:0,5,130	0/0:16,0:16:31.14:0,31,600	0/1:11,0:9:17.83:18,0,53	0/0:17,0:17:28.96:0,29,340	0/1:9,5:11:93.57:126,0,94	0/0:22,0:21:20.66:0,21,146	0/1:12,3:14:48.49:48,0,65	0/0:4,0:3:9.03:0,9,221	0/1:21,0:18:22.71:26,0,23	1/1:20,0:15:10.77:35,11,0	0/0:24,0:22:27.54:0,28,385	0/1:29,0:22:55.02:55,0,464	0/0:15,0:13:9.03:0,9,165	0/1:26,7:30:95.89:136,0,96
chr10	39088140	.	A	AGATGATG	3990.40	PASS	AB=0.945;AC=23;AF=0.442;AN=52;BaseQRankSum=-2.950;DP=512;FS=16.790;HRun=0;HaplotypeScore=167.4971;InbreedingCoeff=-0.1942;MQ=39.78;MQ0=27;MQRankSum=-2.008;QD=10.36;ReadPosRankSum=0.468;VQSLOD=1.6231;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:23:9.52:0,10,141	0/0:11,0:11:16.78:0,17,286	./.	./.	0/1:15,0:14:4.90:5,0,220	1/1:23,0:22:31.39:513,31,0	1/1:16,0:11:7.29:123,7,0	0/1:24,0:14:76.79:91,0,77	0/0:14,0:14:21.80:0,22,223	0/1:33,0:30:99:233,0,586	0/0:14,0:12:8.54:0,9,62	0/1:35,0:32:64.87:65,0,204	0/1:19,0:19:53.46:53,0,340	0/0:19,0:19:20.53:0,21,265	0/0:17,0:17:5.19:0,5,40	0/1:14,0:14:70.25:70,0,223	0/1:11,1:10:27.50:130,0,27	0/1:17,0:17:97.83:98,0,225	1/1:15,0:12:15.66:591,16,0	1/1:4,19:23:11.41:79,11,0	0/1:14,0:13:97.59:130,0,98	0/1:4,0:3:10.01:10,0,78	0/1:20,0:17:42.24:42,0,123	0/1:21,0:15:9.90:72,0,10	0/0:24,0:22:23.76:0,24,287	0/1:22,9:24:97.42:934,0,97	0/1:6,11:16:68.53:79,0,69	0/1:26,0:26:99:671,0,105
chr10	39089588	.	C	CT	3188.87	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=-6.986;DP=235;FS=19.288;HRun=0;HaplotypeScore=29.3881;InbreedingCoeff=0.8260;MQ=76.37;MQ0=1;MQRankSum=1.003;QD=25.51;ReadPosRankSum=6.141;VQSLOD=2.2406;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:23.37:0,23,218	1/1:1,6:7:15.02:200,15,0	0/0:14,0:10:19.26:0,19,194	0/0:13,0:9:13.75:0,14,103	1/1:0,5:5:15.05:204,15,0	0/0:7,0:7:5.52:0,6,40	0/0:10,0:9:18.80:0,19,180	1/1:0,7:7:17.86:200,18,0	1/1:1,9:10:15.04:204,15,0	0/0:7,0:7:14.89:0,15,157	0/0:4,0:4:9.02:0,9,112	0/0:9,0:9:12.05:0,12,123	0/0:12,0:12:35.89:0,36,335	0/0:11,0:11:20.81:0,21,191	1/1:0,10:10:24.08:326,24,0	1/1:0,9:9:24.08:326,24,0	1/1:12,0:12:20.61:151,21,0	0/0:7,0:7:18.43:0,18,180	1/1:1,4:5:12.02:146,12,0	1/1:0,9:9:17.99:223,18,0	1/1:0,11:11:24.08:327,24,0	1/1:0,5:5:8.96:100,9,0	0/0:4,0:4:2.97:0,3,20	0/1:4,0:4:8.64:9,0,15	0/0:2,0:2:2.11:0,2,14	1/1:0,13:13:39.11:502,39,0	1/1:1,9:11:20.98:281,21,0	1/1:0,7:7:15.05:204,15,0
chr10	39090956	.	CG	C	1917.54	PASS	AB=0.871;AC=29;AF=0.518;AN=56;BaseQRankSum=2.508;DP=393;FS=0.000;HRun=11;HaplotypeScore=60.6815;InbreedingCoeff=0.2654;MQ=83.59;MQ0=1;MQRankSum=-0.994;QD=6.95;ReadPosRankSum=5.442;VQSLOD=1.3483;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,17:25:37.53:300,38,0	1/1:4,4:8:5.98:49,6,0	0/0:22,0:15:14.62:0,15,96	0/1:15,1:15:6.08:6,0,19	1/1:4,5:9:11.92:93,12,0	1/1:4,15:20:36.62:268,37,0	1/1:6,11:18:40.93:319,41,0	0/0:14,0:14:21:0,21,200	1/1:6,8:14:32.90:263,33,0	0/1:13,1:14:6.64:7,0,135	0/1:6,2:8:15.63:16,0,48	0/1:6,1:7:9.65:10,0,94	0/0:15,1:16:11.50:0,11,305	0/0:20,0:20:27.01:0,27,258	0/1:8,4:12:12.28:86,0,12	1/1:1,8:9:23.95:197,24,0	1/1:10,15:26:34.90:274,35,0	0/0:13,0:13:39.05:0,39,382	0/0:7,0:7:6.02:0,6,64	0/1:10,1:11:6.50:7,0,135	0/1:6,2:8:16.84:22,0,17	1/1:8,7:15:14.65:123,15,0	0/1:16,1:17:33.31:33,0,201	0/0:16,1:17:15.96:0,16,335	0/0:8,0:8:6.19:0,6,45	0/1:11,1:12:0.62:1,0,176	0/1:15,3:17:28.81:29,0,302	0/1:7,1:8:3.59:4,0,156
chr10	39092916	.	T	TC	4007.48	PASS	AB=0.627;AC=32;AF=0.571;AN=56;BaseQRankSum=-5.122;DP=381;FS=2.160;HRun=8;HaplotypeScore=47.0643;InbreedingCoeff=0.7806;MQ=81.96;MQ0=0;MQRankSum=-1.333;QD=19.27;ReadPosRankSum=1.444;VQSLOD=3.2768;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:25:46.08:0,46,396	1/1:0,4:4:3.01:35,3,0	0/0:17,0:17:21.52:0,22,242	0/0:12,0:12:21.99:0,22,215	1/1:4,13:17:26.85:296,27,0	0/0:28,0:28:72.02:0,72,654	0/0:21,0:22:56.05:0,56,500	1/1:13,8:21:27.02:278,27,0	1/1:8,8:16:33.07:360,33,0	0/0:14,0:15:14.04:0,14,116	0/0:10,0:10:15:0,15,137	1/1:1,7:8:12.04:138,12,0	0/0:15,0:15:27:0,27,246	0/0:13,0:13:30.01:0,30,274	1/1:6,9:15:21.06:242,21,0	1/1:0,17:17:42.12:482,42,0	0/1:3,14:17:12.79:373,0,13	0/0:10,0:10:21.01:0,21,192	0/1:7,5:12:28.66:169,0,29	1/1:2,5:7:15.04:173,15,0	1/1:3,13:16:11.25:324,11,0	1/1:2,4:6:9.03:104,9,0	1/1:3,7:10:14.88:173,15,0	1/1:2,14:17:32.12:409,32,0	0/0:6,0:6:11.03:0,11,88	1/1:5,8:13:21.06:242,21,0	1/1:1,8:9:12.04:139,12,0	1/1:0,3:3:6.02:69,6,0
chr10	39095326	.	AGGAAATCCAGTTGGACGTGGCATG	A	4907.05	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.584;DP=762;FS=3.733;HRun=0;HaplotypeScore=427.3279;InbreedingCoeff=0.9796;MQ=86.62;MQ0=0;MQRankSum=-8.457;QD=63.73;ReadPosRankSum=3.002;VQSLOD=2.7111;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,135,13442	0/0:5,0:5:15.04:0,15,1080	0/0:27,0:27:63.15:0,63,3399	0/0:27,0:27:66.53:0,67,3683	0/0:16,0:16:45.13:0,45,3523	0/0:22,0:22:57.18:0,57,5197	0/0:31,0:31:84.27:0,84,6520	0/0:34,0:34:93.29:0,93,6743	0/0:28,0:28:78.25:0,78,7705	0/0:28,0:28:78.25:0,78,6848	0/0:18,0:18:45.15:0,45,4660	1/1:3,25:29:48.16:3052,48,0	0/0:19,0:19:48.10:0,48,4727	0/0:31,0:31:84.27:0,84,8043	0/0:31,0:30:78.24:0,78,6732	0/0:38,0:38:99:0,111,9747	0/0:43,0:43:99:0,111,10512	0/0:22,0:22:54.17:0,54,4592	0/0:24,0:24:60.19:0,60,4029	0/0:18,0:18:48.15:0,48,4222	0/0:48,0:48:99:0,135,12277	0/0:26,0:26:66.23:0,66,6701	1/1:0,17:17:18.06:1092,18,0	1/1:6,25:31:12.04:763,12,0	0/0:14,0:14:42.12:0,42,3973	0/0:42,0:42:99:0,105,9911	0/0:31,0:31:93.30:0,93,8026	0/0:9,0:9:24.08:0,24,2695
chr10	39096245	.	A	AT	4541.15	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=4.668;DP=584;FS=0.000;HRun=11;HaplotypeScore=75.3728;InbreedingCoeff=0.9236;MQ=76.69;MQ0=2;MQRankSum=-0.766;QD=12.86;ReadPosRankSum=-0.005;VQSLOD=4.7119;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:47,0:47:91.60:384,92,0	0/0:8,0:8:14.92:0,15,116	0/0:29,0:16:18.67:0,19,160	0/0:21,0:18:2.58:0,3,58	0/0:30,0:30:68.67:0,69,531	1/1:20,0:19:37.50:154,37,0	1/1:19,0:19:35.02:146,35,0	1/1:14,14:29:39.63:358,40,0	0/0:20,0:20:41.79:0,42,323	1/1:34,0:35:73.58:299,74,0	1/1:13,0:13:26.21:117,26,0	0/0:14,0:14:35.85:0,36,278	1/1:12,0:13:26.98:115,27,0	1/1:20,0:20:29.58:122,30,0	0/0:13,0:14:34.87:0,35,259	0/0:10,0:9:23.89:0,24,185	0/0:24,0:24:62.72:0,63,482	1/1:18,0:18:36.96:152,37,0	1/1:6,19:26:59.91:577,60,0	1/1:3,17:20:47.79:457,48,0	1/1:1,10:11:3.01:192,3,0	0/0:25,0:25:68.65:0,69,526	0/0:21,0:22:61.81:0,62,470	0/0:14,0:14:35.86:0,36,279	1/1:20,0:20:46.27:204,46,0	1/1:5,16:22:47.76:454,48,0	1/1:6,12:17:3.56:385,4,0	1/1:2,20:22:42.08:426,42,0
chr10	39096255	.	T	TTG	7721.04	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-13.930;DP=583;FS=2.530;HRun=0;HaplotypeScore=71.7860;InbreedingCoeff=0.9960;MQ=77.01;MQ0=2;MQRankSum=-1.985;QD=36.08;ReadPosRankSum=4.360;VQSLOD=6.9089;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,46:47:99:1664,102,0	0/0:7,0:7:18.04:0,18,227	0/0:34,0:21:43:0,43,425	0/0:18,0:14:15.84:0,16,159	0/0:28,0:28:78.18:0,78,1005	1/1:1,18:19:42.14:710,42,0	1/1:1,19:20:39.13:659,39,0	0/0:20,0:20:41.45:0,41,221	0/0:17,0:17:45.12:0,45,580	1/1:1,33:35:99:1539,99,0	1/1:0,15:15:36.12:591,36,0	0/0:12,0:12:36.11:0,36,475	1/1:2,14:16:30.09:481,30,0	1/1:1,19:20:33.11:555,33,0	0/0:14,0:14:39.09:0,39,500	0/0:9,0:8:27.07:0,27,335	0/0:21,0:21:63.21:0,63,862	1/1:1,17:18:42.04:710,42,0	0/0:27,0:27:52.66:0,53,334	0/0:19,0:19:49.54:0,50,242	0/0:12,0:12:24.75:0,25,144	0/0:27,0:27:78.21:0,78,1004	0/0:26,0:26:78.17:0,78,969	0/0:12,0:12:36.12:0,36,493	1/1:0,21:23:51.07:812,51,0	0/0:19,0:19:36.82:0,37,243	0/0:24,0:22:65.76:0,66,420	0/0:21,0:21:40.46:0,40,175
chr10	39096530	.	TTTTCTTTCTTTC	T	796.92	PASS	AC=6;AF=0.111;AN=54;BaseQRankSum=2.424;DP=574;FS=10.800;HRun=0;HaplotypeScore=199.2780;InbreedingCoeff=0.8256;MQ=65.58;MQ0=3;MQRankSum=-4.354;QD=13.51;ReadPosRankSum=-1.130;VQSLOD=1.7551;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:21:39.09:0,39,926	0/0:14,0:14:33.11:0,33,1361	./.	0/0:23,0:16:4.83:0,5,49	0/0:28,0:29:63.21:0,63,2750	0/0:19,0:19:9.03:0,9,225	0/0:28,0:28:15.04:0,15,383	0/0:42,0:42:24.08:0,24,436	0/0:16,0:16:42.13:0,42,1639	0/0:30,0:35:69.22:0,69,1671	0/0:6,0:9:18.05:0,18,404	1/1:2,8:10:12.04:415,12,0	0/0:18,0:18:39.95:0,40,743	0/0:16,0:20:42.14:0,42,1374	0/0:17,0:17:36.12:0,36,1884	0/0:12,0:12:24.08:0,24,1307	0/0:19,0:19:36.09:0,36,1129	0/0:14,0:15:30.06:0,30,571	0/0:25,0:25:42.13:0,42,1670	0/0:9,0:9:21.07:0,21,858	0/0:21,0:21:33.07:0,33,1189	0/0:19,0:19:42.14:0,42,1986	1/1:10,10:20:3.57:203,4,0	1/1:13,16:29:8.26:299,8,0	0/0:27,0:27:30.10:0,30,795	0/0:22,0:22:48.15:0,48,1799	0/0:19,0:19:27.09:0,27,1226	0/0:17,0:16:30.09:0,30,1090
chr10	39096564	.	T	TC	82.07	PASS	AB=0.883;AC=6;AF=0.107;AN=56;BaseQRankSum=7.379;DP=534;FS=5.799;HRun=0;HaplotypeScore=84.4988;InbreedingCoeff=-0.1198;MQ=54.81;MQ0=14;MQRankSum=-3.533;QD=0.68;ReadPosRankSum=3.418;VQSLOD=0.7468;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:24,4:26:20.70:21,0,360	0/0:12,0:12:36.12:0,36,499	0/0:7,0:4:10.58:0,11,129	0/0:16,0:8:16.89:0,17,139	0/0:26,0:26:75.12:0,75,990	0/0:19,0:17:8.20:0,8,69	0/1:22,0:19:6.83:7,0,31	0/0:27,0:27:72.23:0,72,984	0/0:21,0:21:63.21:0,63,879	0/1:14,10:21:90.30:90,0,480	0/1:10,4:12:42.48:42,0,111	0/0:15,0:15:32.25:0,32,330	0/1:17,0:16:7.96:8,0,407	0/0:19,0:19:10.80:0,11,281	0/0:28,0:28:81.26:0,81,1114	0/0:15,0:15:45.14:0,45,613	0/0:18,0:18:45.08:0,45,587	0/1:14,1:15:32.06:32,0,287	0/0:23,0:21:57.19:0,57,788	0/0:13,0:13:36.06:0,36,461	0/0:9,0:9:24.06:0,24,317	0/0:20,0:20:60.18:0,60,806	0/0:19,0:18:27.14:0,27,320	0/0:24,0:24:32.25:0,32,325	0/0:27,0:26:24.36:0,24,206	0/0:21,0:21:63.21:0,63,876	0/0:17,0:17:51.17:0,51,699	0/0:18,0:17:48.16:0,48,666
chr10	39096568	.	T	TTCTTTCTTTCTCTC	7415.61	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=6.650;DP=548;FS=8.643;HRun=0;HaplotypeScore=181.5773;InbreedingCoeff=0.8778;MQ=55.11;MQ0=12;MQRankSum=-6.451;QD=34.65;ReadPosRankSum=1.201;VQSLOD=3.0068;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:25:48.49:974,48,0	0/0:12,0:12:33.08:0,33,933	0/0:8,0:5:14.99:0,15,236	0/1:21,0:12:7.27:7,0,177	0/0:24,0:24:72.25:0,72,2155	1/1:2,11:22:3.01:210,3,0	1/1:18,0:20:14.55:370,15,0	0/0:27,0:27:69.08:0,69,1037	0/0:22,0:22:63.19:0,63,1585	1/1:24,0:21:40.32:1241,40,0	1/1:15,0:13:30:546,30,0	0/0:15,0:15:33.10:0,33,664	1/1:12,0:15:42.10:857,42,0	1/1:14,0:19:51.11:1195,51,0	0/0:28,0:28:81.27:0,81,2191	0/0:17,0:16:51:0,51,1366	0/0:16,0:16:39.13:0,39,1005	1/1:16,0:16:37.61:845,38,0	0/0:21,0:21:53.23:0,53,1389	0/0:12,0:12:33.11:0,33,795	0/0:10,0:10:24.07:0,24,804	0/0:21,0:21:63.20:0,63,1663	0/0:21,0:20:35.05:0,35,614	0/0:25,0:25:4.50:0,5,588	1/1:3,18:28:18.06:1170,18,0	0/0:19,0:19:51.17:0,51,1463	0/0:16,0:16:45.15:0,45,1266	0/0:20,0:19:48.12:0,48,1189
chr10	39096570	.	C	CTTTCTT	3137.17	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=11.666;DP=544;FS=7.186;HRun=0;HaplotypeScore=115.4958;InbreedingCoeff=0.4379;MQ=55.04;MQ0=11;MQRankSum=-7.841;QD=16.69;ReadPosRankSum=2.041;VQSLOD=2.7602;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:26:33.78:448,0,34	0/0:12,0:12:33.09:0,33,667	0/0:12,0:7:18.06:0,18,247	0/0:21,0:12:5.60:0,6,222	0/0:25,0:25:75.24:0,75,1510	0/1:21,0:19:17.93:80,0,18	1/1:8,12:20:14.50:196,15,0	0/0:27,0:27:69.68:0,70,964	0/0:22,0:22:63.19:0,63,1153	1/1:25,0:22:42.28:539,42,0	0/1:15,0:13:24.20:180,0,24	0/0:15,0:15:33.11:0,33,483	1/1:16,1:16:42.01:614,42,0	1/1:19,0:19:2.09:515,2,0	0/0:28,0:28:84.27:0,84,1543	0/0:17,0:16:51.17:0,51,955	0/0:15,0:15:39.13:0,39,760	0/1:17,0:17:49.78:206,0,50	0/0:20,0:20:53.92:0,54,1011	0/0:13,0:13:36.11:0,36,629	0/0:10,0:10:27.08:0,27,553	0/0:21,0:21:63.20:0,63,1237	0/0:20,0:20:34.80:0,35,521	0/0:24,0:24:1.07:0,1,338	0/1:23,0:22:3.86:527,0,4	0/0:18,0:18:51.17:0,51,1005	0/0:16,0:16:48.14:0,48,889	0/0:20,0:19:51.15:0,51,876
chr10	39098039	.	C	CT	232.20	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-2.858;DP=529;FS=4.261;HRun=7;HaplotypeScore=57.2274;InbreedingCoeff=0.9415;MQ=88.55;MQ0=0;MQRankSum=-0.598;QD=23.22;ReadPosRankSum=-2.221;VQSLOD=2.9371;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,137,1317	0/0:6,0:6:18.03:0,18,174	0/0:23,0:23:48.04:0,48,455	0/0:21,0:21:17.36:0,17,333	0/0:10,0:10:30.05:0,30,289	0/0:12,0:12:36.06:0,36,348	0/0:32,0:32:81.12:0,81,782	0/0:12,0:12:33.04:0,33,314	0/0:13,0:13:39.05:0,39,371	0/0:18,0:18:45.06:0,45,430	0/0:20,0:20:57.09:0,57,549	0/0:13,0:13:36.03:0,36,340	0/0:18,0:18:48.06:0,48,458	0/0:16,0:16:39.04:0,39,371	0/0:11,0:11:30.05:0,30,290	0/0:7,0:7:18.02:0,18,174	0/0:33,0:33:95.87:0,96,927	0/0:26,0:26:66.10:0,66,637	0/0:25,0:25:69.09:0,69,659	0/0:10,0:9:24.04:0,24,231	0/0:47,0:47:99:0,129,1243	0/0:15,0:15:32.99:0,33,308	0/0:10,0:10:30.05:0,30,289	0/0:37,0:37:96.14:0,96,922	1/1:1,9:10:27.08:326,27,0	0/0:16,0:16:45.07:0,45,434	0/0:13,0:13:39.06:0,39,376	0/0:4,0:4:12.02:0,12,116
chr10	39098481	.	CGTGTGTGTGTGTGTGT	C	4066.82	PASS	AB=0.758;AC=20;AF=0.370;AN=54;BaseQRankSum=7.648;DP=490;FS=8.337;HRun=0;HaplotypeScore=193.2318;InbreedingCoeff=0.3815;MQ=52.00;MQ0=18;MQRankSum=-6.909;QD=18.83;ReadPosRankSum=2.605;VQSLOD=1.9963;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:21.07:0,21,689	0/1:5,0:7:51.07:51,0,57	0/0:18,0:9:3.01:0,3,71	./.	0/1:18,0:26:53.72:130,0,54	0/0:15,0:18:15.05:0,15,505	0/0:16,0:22:18.53:0,19,503	1/1:22,0:21:0.48:23,0,0	0/1:5,0:7:99:122,0,168	0/0:23,0:28:48.80:0,49,998	0/0:12,0:11:9.03:0,9,236	0/0:15,0:18:27.09:0,27,1144	0/0:7,0:8:11.40:0,11,358	0/0:11,0:15:20.43:0,20,656	0/1:6,0:12:66.89:137,0,67	0/1:5,0:12:46.05:205,0,46	0/1:24,0:24:50.60:51,0,235	0/0:8,0:11:12.04:0,12,326	1/1:14,4:19:12.03:373,12,0	1/1:14,6:19:12.04:526,12,0	0/0:18,0:15:3.01:0,3,122	1/1:5,0:13:6.02:103,6,0	0/0:7,0:11:15.05:0,15,728	0/0:27,0:30:33.11:0,33,1540	0/0:13,0:23:27.09:0,27,1880	1/1:16,7:23:24.01:638,24,0	1/1:7,10:16:20.84:920,21,0	1/1:5,6:11:18.06:789,18,0
chr10	39099722	.	CTCTCTCTG	C	3399.85	PASS	AB=1.000;AC=30;AF=0.600;AN=50;BaseQRankSum=-3.099;DP=607;FS=12.284;HRun=0;HaplotypeScore=147.4865;InbreedingCoeff=-0.0744;MQ=48.98;MQ0=33;MQRankSum=1.543;QD=6.65;ReadPosRankSum=-2.059;VQSLOD=1.7159;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:29:17.95:28,0,18	1/1:10,0:8:3:25,3,0	./.	./.	1/1:4,23:26:0.47:1,0,0	1/1:5,0:23:3.01:54,3,0	1/1:19,0:18:5.74:50,6,0	1/1:26,0:24:14.60:300,15,0	1/1:22,0:22:44.69:428,45,0	0/1:17,0:15:98.68:99,0,106	./.	0/0:22,0:22:2.94:0,3,18	0/1:16,0:15:34.62:35,0,174	0/0:17,0:17:12.47:0,12,269	1/1:32,0:32:47.09:616,47,0	0/1:27,0:27:99:400,0,159	1/1:4,28:31:6.02:114,6,0	0/1:16,0:13:57.65:58,0,423	0/1:25,0:24:50.52:286,0,51	0/1:24,0:24:6.04:34,0,6	0/1:36,0:33:8.65:293,0,9	0/1:14,0:13:0:0,0,0	0/1:27,0:27:0:0,0,0	0/1:50,0:46:99:259,0,314	1/1:13,0:12:6:52,6,0	0/1:21,0:20:47.45:269,0,47	0/0:27,0:27:5.27:0,5,37	0/0:14,0:11:0.97:0,1,97
chr10	39099726	.	CTCTG	C	4576.27	PASS	AB=1.000;AC=40;AF=0.800;AN=50;BaseQRankSum=-1.991;DP=608;FS=1.620;HRun=0;HaplotypeScore=130.1161;InbreedingCoeff=0.2486;MQ=49.58;MQ0=29;MQRankSum=1.559;QD=8.25;ReadPosRankSum=0.797;VQSLOD=4.2634;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:34,0:30:3:25,3,0	1/1:10,0:8:2.95:24,3,0	./.	./.	0/1:25,0:24:0:1,0,0	1/1:23,0:22:2.99:24,3,0	1/1:20,0:19:14.70:120,15,0	1/1:28,0:26:46.14:421,46,0	1/1:20,0:20:24.32:295,24,0	1/1:20,0:18:36.84:271,37,0	./.	1/1:23,0:23:2.92:18,3,0	0/1:19,0:18:34.74:35,0,45	0/0:17,0:17:7.82:0,8,70	1/1:30,0:30:38.02:318,38,0	0/1:28,0:28:99:145,0,178	1/1:31,0:30:5.81:49,6,0	0/1:16,0:13:67.72:87,0,68	1/1:27,0:27:55.99:543,56,0	1/1:23,1:24:5.94:43,6,0	1/1:35,0:32:62.46:769,62,0	0/1:15,0:14:0.01:0,0,0	0/1:27,0:27:0:0,0,0	1/1:50,0:46:82.96:703,83,0	1/1:13,0:12:6:52,6,0	1/1:23,1:23:60.51:508,61,0	0/0:4,22:26:2.11:0,2,12	1/1:13,0:10:8.44:126,8,0
chr10	39099728	.	CTG	C	4279.80	PASS	AB=0.880;AC=42;AF=0.840;AN=50;BaseQRankSum=-2.319;DP=601;FS=21.390;HRun=0;HaplotypeScore=118.4146;InbreedingCoeff=0.3398;MQ=49.35;MQ0=28;MQRankSum=0.815;QD=7.74;ReadPosRankSum=1.489;VQSLOD=2.8596;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:6,28:30:1.82:5,2,0	1/1:1,8:8:2.96:24,3,0	./.	./.	0/1:25,0:24:0:1,0,0	1/1:23,0:22:2.50:9,2,0	1/1:17,3:19:14.70:120,15,0	1/1:4,22:24:46.29:422,46,0	1/1:20,0:20:18.51:246,19,0	1/1:2,18:18:41.66:362,42,0	./.	1/1:2,20:22:3.48:36,3,0	1/1:19,0:18:9.70:56,10,0	1/1:17,0:17:3.88:27,4,0	0/1:28,0:28:0.72:151,0,1	0/1:26,0:26:3.14:3,0,190	1/1:32,0:31:5.78:35,6,0	1/1:17,0:14:29.85:197,30,0	1/1:4,23:27:54.71:519,55,0	1/1:25,0:25:8.92:68,9,0	1/1:37,0:34:56.65:496,57,0	0/0:14,0:13:0:0,0,0	0/1:2,0:26:0:0,0,0	1/1:43,7:46:89.42:888,89,0	1/1:13,0:12:6:52,6,0	1/1:24,0:23:61.21:444,61,0	0/0:24,0:24:2.32:0,2,11	1/1:13,0:10:9.85:119,10,0
chr10	39099730	.	GTCTC	G	4052.66	PASS	AB=0.940;AC=32;AF=0.640;AN=50;BaseQRankSum=-2.659;DP=608;FS=3.263;HRun=0;HaplotypeScore=130.5928;InbreedingCoeff=0.2810;MQ=49.27;MQ0=29;MQRankSum=-1.005;QD=8.11;ReadPosRankSum=2.806;VQSLOD=2.5120;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:33,0:29:3.01:49,3,0	1/1:10,0:9:5.96:73,6,0	./.	./.	0/1:25,0:24:0:1,0,0	1/1:22,0:21:3.01:35,3,0	0/1:21,0:20:4.79:5,0,16	1/1:28,0:26:17.87:397,18,0	1/1:19,0:19:33.31:420,33,0	0/1:21,0:19:24.35:52,0,24	./.	0/0:22,0:22:0.47:0,0,1	0/1:19,0:18:20.30:20,0,112	0/0:19,0:19:14.83:0,15,183	1/1:25,1:26:39.05:536,39,0	1/1:28,0:28:32.79:400,33,0	1/1:34,0:33:5.90:43,6,0	0/0:18,0:15:19.53:0,20,274	1/1:28,0:27:48.02:516,48,0	1/1:3,21:24:3.95:37,4,0	1/1:37,0:34:52.91:719,53,0	0/1:1,13:13:0.01:0,0,0	0/1:27,0:27:0:0,0,0	0/1:49,0:45:49.47:58,0,49	0/0:14,0:13:0.29:0,0,17	1/1:23,0:22:51.60:556,52,0	0/0:24,0:24:2.47:0,2,13	0/1:12,0:9:7.22:133,0,7
chr10	39099734	.	CTGTGTG	C	229.28	PASS	AB=1.000;AC=17;AF=0.354;AN=48;BaseQRankSum=0.748;DP=614;FS=0.976;HRun=0;HaplotypeScore=150.5106;InbreedingCoeff=0.4561;MQ=49.36;MQ0=27;MQRankSum=0.988;QD=0.84;ReadPosRankSum=-0.416;VQSLOD=2.7901;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	0/0:10,0:9:5.82:0,6,73	./.	0/0:2,0:1:3.01:0,3,47	1/1:25,0:24:0.47:1,0,0	1/1:22,0:21:2.98:22,3,0	1/1:20,0:20:15.30:106,15,0	0/0:26,0:25:33.01:0,33,292	0/0:20,0:20:33.15:0,33,236	0/1:21,0:19:17.45:17,0,94	./.	./.	1/1:11,9:19:2.84:52,3,0	1/1:14,0:18:3.01:49,3,0	0/0:24,0:24:18.31:0,18,139	0/0:30,0:30:49.08:0,49,931	0/1:36,0:35:2.66:3,0,115	1/1:21,0:18:13.51:87,14,0	0/0:31,0:30:40.80:0,41,354	0/0:24,0:24:8.50:0,8,64	0/0:38,0:35:43.99:0,44,398	0/1:14,0:13:0.27:0,0,0	0/1:26,0:26:0:0,0,0	0/1:48,0:45:31.13:31,0,282	0/0:14,0:13:8.81:0,9,72	0/0:24,0:23:41.70:0,42,386	0/0:22,0:22:0:0,0,0	0/0:13,0:10:17.93:0,18,197
chr10	39100474	.	GCACACACACACACA	G	15130.16	PASS	AB=0.758;AC=43;AF=0.768;AN=56;BaseQRankSum=6.361;DP=573;FS=31.822;HRun=0;HaplotypeScore=259.3603;InbreedingCoeff=0.2987;MQ=54.82;MQ0=17;MQRankSum=-1.833;QD=34.31;ReadPosRankSum=4.442;VQSLOD=2.4156;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:24,6:31:30.93:858,31,0	1/1:9,5:14:21.06:682,21,0	0/0:32,0:13:0.87:0,1,175	0/0:44,0:21:9.03:0,9,260	1/1:7,9:16:18.06:710,18,0	1/1:11,0:17:18.06:587,18,0	1/1:14,0:21:21.07:681,21,0	0/0:22,0:22:13.58:0,14,88	1/1:11,5:17:21.02:681,21,0	0/1:15,5:21:99:719,0,112	1/1:14,5:18:18.06:635,18,0	1/1:13,12:27:42.14:1575,42,0	1/1:15,0:20:21.07:684,21,0	1/1:4,1:10:18.06:594,18,0	1/1:9,4:14:18.06:600,18,0	1/1:7,7:14:2.12:922,2,0	1/1:13,2:16:15.01:358,15,0	0/1:16,3:19:62.24:462,0,62	1/1:8,0:12:0.80:290,1,0	1/1:11,1:16:5.18:403,5,0	0/0:30,1:33:5.95:0,6,195	1/1:11,4:16:0.09:669,0,0	1/1:13,7:20:14.82:498,15,0	1/1:21,5:27:11.62:452,12,0	1/1:5,0:9:12.04:391,12,0	0/1:15,1:28:15.03:821,0,15	0/1:9,1:15:1.92:421,0,2	0/1:13,1:19:18.88:434,0,19
chr10	39100536	.	CT	C	14655.51	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=3.244;DP=645;FS=21.568;HRun=7;HaplotypeScore=170.0282;InbreedingCoeff=0.9977;MQ=67.43;MQ0=0;MQRankSum=-9.036;QD=25.10;ReadPosRankSum=2.940;VQSLOD=2.8439;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,29:32:75.16:762,75,0	1/1:1,12:13:33.07:337,33,0	0/0:31,0:31:50.70:0,51,844	0/0:30,0:24:21.85:0,22,459	1/1:3,20:23:51.11:519,51,0	1/1:2,25:27:75.09:752,75,0	1/1:4,16:20:45.10:457,45,0	1/1:1,31:32:87.19:887,87,0	1/1:3,20:23:57.13:581,57,0	1/1:4,16:20:50.96:498,51,0	1/1:1,17:18:39.08:398,39,0	1/1:0,27:27:78.18:794,78,0	1/1:2,19:21:51.11:520,51,0	1/1:1,15:16:39.09:397,39,0	1/1:2,17:19:51.11:520,51,0	1/1:2,14:16:42.09:428,42,0	1/1:3,28:31:60.13:612,60,0	1/1:1,13:14:36.08:366,36,0	1/1:4,25:29:75.14:756,75,0	1/1:3,19:22:57.13:581,57,0	1/1:4,33:37:87.19:885,87,0	1/1:1,15:16:41.91:428,42,0	1/1:4,17:21:45.10:458,45,0	1/1:2,27:29:69.15:702,69,0	1/1:1,15:16:42.09:428,42,0	1/1:4,29:33:87.19:885,87,0	1/1:3,14:17:36.07:367,36,0	1/1:0,12:12:33.07:337,33,0
chr10	39100644	.	GCACACACACACA	G	8506.75	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=3.510;DP=539;FS=1.033;HRun=0;HaplotypeScore=188.6901;InbreedingCoeff=0.9156;MQ=50.60;MQ0=6;MQRankSum=-7.460;QD=34.72;ReadPosRankSum=2.422;VQSLOD=4.4622;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:26:19.99:0,20,782	1/1:5,6:11:12.04:391,12,0	0/0:23,0:7:9.03:0,9,447	0/0:28,0:9:13.29:0,13,514	1/1:10,5:15:8.86:283,9,0	0/0:14,0:21:39.13:0,39,1938	0/0:13,0:24:41.62:0,42,1843	1/1:10,1:12:9.03:234,9,0	1/1:6,8:15:21.07:718,21,0	0/0:17,0:20:48.16:0,48,2352	0/0:4,0:6:9.02:0,9,249	0/0:19,0:21:48.16:0,48,2468	0/0:9,0:22:31.58:0,32,1457	0/0:7,0:17:30.10:0,30,1468	1/1:9,12:20:30.10:1058,30,0	1/1:5,7:14:24.01:802,24,0	1/1:21,18:39:10.08:863,10,0	0/0:18,0:20:30.10:0,30,1221	1/1:9,7:16:21.06:660,21,0	1/1:4,10:14:24.08:759,24,0	1/1:24,8:33:2.60:36,3,0	1/1:7,9:17:21.07:652,21,0	0/0:18,0:18:20.89:0,21,1117	0/0:29,0:34:75.26:0,75,3984	0/0:5,0:12:18.06:0,18,953	1/1:11,10:22:24.06:698,24,0	1/1:3,9:13:30.10:1036,30,0	1/1:0,3:3:9.03:317,9,0
chr10	39100903	.	TTGTGTGTGTGTGTGTGTG	T	1372.44	PASS	AB=0.835;AC=10;AF=0.227;AN=44;BaseQRankSum=0.923;DP=379;FS=16.181;HRun=0;HaplotypeScore=150.8440;InbreedingCoeff=0.2466;MQ=64.77;MQ0=20;MQRankSum=-1.269;QD=13.86;ReadPosRankSum=-0.157;VQSLOD=1.3878;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:13:3.01:0,3,219	./.	0/0:24,0:15:2.37:0,2,8	0/0:22,0:14:18.02:0,18,384	1/1:10,1:13:5.92:74,6,0	0/0:29,0:28:29.41:0,29,1490	0/0:13,0:13:4.93:0,5,320	0/1:18,0:17:11.14:11,0,72	./.	0/0:14,0:13:18.06:0,18,876	0/0:20,0:18:12.04:0,12,786	./.	0/0:6,0:6:12.04:0,12,652	0/0:5,0:8:12.04:0,12,468	./.	0/1:6,3:9:99:281,0,122	0/0:10,4:12:3.01:0,3,39	0/0:10,0:5:6.02:0,6,215	1/1:6,0:12:15.05:451,15,0	./.	0/0:6,2:5:3:0,3,25	1/1:11,2:13:6.02:164,6,0	0/0:16,0:18:24.05:0,24,421	0/0:3,0:10:0:0,0,0	0/0:12,0:11:6.49:0,6,458	0/1:17,0:17:19.93:413,0,20	0/1:8,0:9:34.78:110,0,35	./.
chr10	39100973	.	G	GAC	218.45	PASS	AB=0.896;AC=9;AF=0.188;AN=48;BaseQRankSum=1.697;DP=482;FS=5.654;HRun=0;HaplotypeScore=101.0175;InbreedingCoeff=0.0927;MQ=29.91;MQ0=58;MQRankSum=-0.309;QD=1.92;ReadPosRankSum=1.796;VQSLOD=1.2331;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:17,1:11:2.80:13,3,0	0/0:5,0:5:6.39:0,6,42	./.	0/0:23,0:3:2.80:0,3,13	./.	0/0:18,0:22:9.94:0,10,61	0/0:13,5:9:3.27:0,3,11	0/0:45,0:43:99:0,122,775	0/0:20,0:17:8.70:0,9,76	0/1:7,8:13:41.71:213,0,42	./.	0/1:17,0:15:7.01:7,0,35	0/1:8,1:7:8.24:28,0,8	0/0:9,0:7:7.90:0,8,44	0/0:15,0:14:5.99:0,6,50	0/0:17,0:10:19.84:0,20,141	0/0:11,0:6:2.79:0,3,37	0/1:12,1:7:22.18:50,0,22	0/0:29,0:27:66.93:0,67,442	0/0:14,0:12:7.09:0,7,33	./.	0/0:22,0:19:6.45:0,6,48	0/0:23,0:21:2.24:0,2,8	1/1:22,0:17:2.98:22,3,0	0/0:15,0:10:1.86:0,2,5	0/0:26,0:19:41.39:0,41,230	0/1:20,0:18:0.16:0,0,99	0/0:5,0:2:2.90:0,3,16
chr10	39100991	.	GACAC	G	4248.39	PASS	AB=0.895;AC=43;AF=0.860;AN=50;BaseQRankSum=-2.077;DP=473;FS=6.247;HRun=0;HaplotypeScore=106.0222;InbreedingCoeff=0.1449;MQ=46.74;MQ0=40;MQRankSum=1.617;QD=10.52;ReadPosRankSum=1.045;VQSLOD=3.7043;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:13:6.01:65,6,0	1/1:9,0:9:11.90:130,12,0	0/0:22,0:8:9.04:0,9,270	0/1:39,1:17:32.74:33,0,435	./.	1/1:19,0:16:13.64:193,14,0	1/1:12,0:8:12.03:131,12,0	1/1:35,0:34:13.35:188,13,0	1/1:17,0:15:9.49:113,9,0	0/1:13,0:12:76.71:162,0,77	./.	1/1:20,0:18:21.94:297,22,0	1/1:9,0:8:8.79:98,9,0	1/1:8,0:6:11.94:128,12,0	1/1:15,0:14:15.05:247,15,0	1/1:16,0:11:18:267,18,0	1/1:10,0:5:2.69:8,3,0	1/1:10,0:7:10.09:99,10,0	0/1:20,0:18:26.71:260,0,27	1/1:11,0:10:2.78:50,3,0	./.	1/1:18,0:16:12.44:163,12,0	0/1:0,15:14:0:0,0,0	1/1:20,0:17:8.95:148,9,0	1/1:12,0:9:9.49:125,9,0	0/1:27,0:21:66.80:463,0,67	1/1:22,0:21:48.12:651,48,0	1/1:7,0:5:15.05:228,15,0
chr10	39103140	.	C	CT	9074.13	PASS	AB=0.786;AC=44;AF=0.786;AN=56;BaseQRankSum=-7.139;DP=524;FS=0.992;HRun=10;HaplotypeScore=57.7969;InbreedingCoeff=0.7803;MQ=72.57;MQ0=3;MQRankSum=0.682;QD=20.81;ReadPosRankSum=1.105;VQSLOD=5.7905;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,22:27:50.54:743,51,0	1/1:1,5:6:9.02:94,9,0	0/0:28,0:17:26.09:0,26,194	0/1:24,0:16:7.22:7,0,123	1/1:6,14:20:17.52:391,18,0	1/1:6,18:24:38.48:599,38,0	1/1:3,11:14:36.07:375,36,0	1/1:8,13:21:47.11:461,47,0	1/1:3,13:16:8.74:296,9,0	1/1:7,11:18:42.11:448,42,0	1/1:3,15:19:45.11:474,45,0	0/0:12,0:12:32.96:0,33,271	1/1:9,7:17:30.03:305,30,0	1/1:5,7:12:28.62:291,29,0	1/1:3,9:12:27.06:284,27,0	1/1:3,11:14:33.08:352,33,0	1/1:7,39:49:98.71:990,99,0	1/1:8,9:17:10.81:302,11,0	1/1:11,18:28:29.43:499,29,0	1/1:2,14:16:42.06:434,42,0	1/1:5,10:15:30.08:319,30,0	1/1:5,10:15:36.56:383,37,0	0/0:14,0:14:29.96:0,30,246	0/0:16,0:16:41.93:0,42,344	0/0:18,0:18:44.94:0,45,369	1/1:4,17:22:4.69:442,5,0	1/1:2,18:20:39.10:416,39,0	0/1:2,6:8:3.59:171,0,4
chr10	39103236	.	TA	T	6679.98	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=13.818;DP=566;FS=3.872;HRun=3;HaplotypeScore=53.9378;InbreedingCoeff=0.9815;MQ=60.86;MQ0=3;MQRankSum=-0.036;QD=32.91;ReadPosRankSum=1.732;VQSLOD=5.2180;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,50:50:99:1711,138,0	0/0:5,0:5:12.04:0,12,168	0/0:8,0:5:15.02:0,15,193	0/0:13,0:10:20.57:0,21,340	0/0:24,0:24:69.20:0,69,956	1/1:1,16:17:45.14:558,45,0	1/1:2,25:26:26.05:775,26,0	0/0:22,0:22:63.21:0,63,907	0/0:22,0:22:66.22:0,66,948	1/1:1,26:26:72.23:892,72,0	1/1:1,23:23:69.22:855,69,0	0/0:14,0:14:42.14:0,42,603	1/1:1,12:13:30.09:372,30,0	1/1:0,16:16:45.14:558,45,0	0/0:21,0:21:63.21:0,63,907	0/0:11,0:11:33.11:0,33,475	0/0:38,0:38:99:0,105,1469	1/1:1,28:29:41.14:960,41,0	0/0:14,0:14:39.12:0,39,536	0/0:20,0:20:57.15:0,57,796	0/0:23,0:22:66.22:0,66,948	0/0:18,0:18:54.17:0,54,760	0/0:14,0:14:42.14:0,42,605	0/0:21,0:21:63.17:0,63,880	0/0:18,0:18:54.18:0,54,777	0/0:24,0:24:72.24:0,72,1037	0/0:28,0:28:81.26:0,81,1145	0/0:5,0:4:9.03:0,9,130
chr10	39103837	.	C	CAA	496.49	PASS	AB=0.912;AC=16;AF=0.286;AN=56;BaseQRankSum=2.269;DP=395;FS=16.815;HRun=0;HaplotypeScore=72.8393;InbreedingCoeff=0.2126;MQ=49.98;MQ0=28;MQRankSum=-5.104;QD=2.68;ReadPosRankSum=0.444;VQSLOD=0.5352;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:31,0:31:6.56:7,0,399	0/0:3,0:3:7.26:0,7,72	0/0:40,0:4:11.83:0,12,132	0/0:26,0:8:4.65:0,5,163	0/1:12,0:12:1.50:1,0,141	0/0:12,0:12:12.38:0,12,167	0/0:17,0:17:41.87:0,42,482	1/1:15,1:17:11.35:148,11,0	0/0:15,0:14:14.32:0,14,142	0/0:15,0:11:23.87:0,24,312	0/0:12,0:11:6.86:0,7,360	0/0:9,0:9:24.01:0,24,318	0/0:7,0:7:14.31:0,14,143	0/0:5,0:5:8.49:0,8,70	0/0:11,0:11:18.01:0,18,169	0/1:7,0:7:5.50:6,0,50	0/1:28,2:29:15.88:16,0,265	0/0:11,0:11:12:0,12,144	1/1:12,2:14:5:123,5,0	1/1:5,3:10:15.69:121,16,0	0/1:4,0:4:0.07:42,0,0	0/1:8,0:8:18.52:19,0,50	0/0:7,0:7:12.04:0,12,196	0/0:20,0:20:45.08:0,45,668	0/1:12,0:13:1.96:16,0,2	0/1:16,2:18:47.82:130,0,48	0/1:5,5:10:14.61:24,0,15	0/1:5,0:6:0.89:1,0,11
chr10	39103838	.	C	CAA	1539.03	PASS	AB=0.910;AC=25;AF=0.446;AN=56;BaseQRankSum=3.845;DP=398;FS=28.353;HRun=0;HaplotypeScore=69.9424;InbreedingCoeff=0.1352;MQ=50.28;MQ0=27;MQRankSum=-4.266;QD=6.41;ReadPosRankSum=1.392;VQSLOD=1.5029;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:31,0:31:97.50:97,0,173	0/1:2,1:3:0.12:30,0,0	0/0:40,0:4:9.33:0,9,95	0/0:26,0:8:17.25:0,17,136	0/1:5,6:12:24.83:112,0,25	0/0:12,0:12:6.79:0,7,111	0/1:16,0:16:7.28:7,0,133	1/1:19,0:17:6.57:148,7,0	1/1:14,0:14:0.89:54,1,0	0/0:14,0:11:12.09:0,12,153	0/1:12,0:11:12.14:12,0,244	0/0:8,0:8:14.88:0,15,226	0/0:7,0:7:3.10:0,3,66	0/1:5,0:5:17.75:18,0,29	0/0:13,0:13:1.71:0,2,17	1/1:2,6:9:10.95:149,11,0	1/1:17,6:28:27.63:406,28,0	0/0:11,0:11:4.55:0,5,48	0/1:14,0:13:30.80:90,0,31	1/1:11,0:10:14.09:150,14,0	0/1:6,0:5:5.05:22,0,5	1/1:1,1:8:17.25:135,17,0	0/0:8,0:8:11.96:0,12,194	0/0:19,0:19:45.11:0,45,654	1/1:2,1:13:11.86:88,12,0	0/1:8,1:20:32.89:162,0,33	0/1:10,0:10:28.13:28,0,37	0/1:7,0:7:5:5,0,24
chr10	39103839	.	C	CAAAA	5865.34	PASS	AB=0.880;AC=45;AF=0.804;AN=56;BaseQRankSum=0.496;DP=448;FS=7.280;HRun=15;HaplotypeScore=95.0768;InbreedingCoeff=0.5158;MQ=48.78;MQ0=26;MQRankSum=-6.288;QD=16.57;ReadPosRankSum=-2.101;VQSLOD=2.0972;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,3:37:33.54:527,34,0	1/1:3,0:3:2.96:19,3,0	0/0:39,0:4:7.53:0,8,75	0/0:27,0:8:16.23:0,16,111	0/1:15,0:14:37:181,0,37	1/1:14,0:16:20.87:348,21,0	1/1:9,5:18:40.79:612,41,0	1/1:22,0:21:42.61:352,43,0	1/1:5,0:14:7.16:53,7,0	1/1:10,0:17:29.94:372,30,0	1/1:14,1:17:31.75:418,32,0	0/1:7,0:8:6.53:7,0,132	1/1:1,4:6:9.03:184,9,0	1/1:2,0:6:6.02:94,6,0	0/1:7,0:16:6.45:30,0,6	1/1:8,0:8:11.97:97,12,0	1/1:28,0:27:28.76:356,29,0	1/1:5,7:15:18.02:265,18,0	1/1:17,0:16:25.45:280,25,0	1/1:10,0:9:22.47:216,22,0	1/1:5,0:4:3:27,3,0	1/1:8,1:9:18.66:249,19,0	0/0:8,0:8:7.31:0,7,102	0/0:15,0:19:36.96:0,37,372	1/1:14,0:15:19.88:313,20,0	1/1:23,0:23:45.36:564,45,0	1/1:16,0:16:5.25:243,5,0	1/1:7,0:7:5.42:58,5,0
chr10	39104087	.	T	TTG	2730.97	PASS	AB=0.933;AC=23;AF=0.411;AN=56;BaseQRankSum=-4.112;DP=577;FS=2.758;HRun=0;HaplotypeScore=107.7034;InbreedingCoeff=0.1591;MQ=67.65;MQ0=4;MQRankSum=-0.398;QD=7.54;ReadPosRankSum=0.410;VQSLOD=3.2993;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:15,22:37:17.22:609,0,17	0/0:6,0:6:11.69:0,12,81	0/1:27,0:20:1.51:2,0,158	0/0:26,0:20:17.22:0,17,234	0/1:25,0:25:51.84:52,0,158	0/1:11,9:19:19.83:83,0,20	1/1:13,9:20:11.01:338,11,0	0/1:34,0:33:4.62:5,0,165	0/1:21,0:21:34.10:34,0,143	1/1:8,12:22:17.55:477,18,0	1/1:3,10:13:21.07:332,21,0	0/0:18,0:18:24.06:0,24,274	1/1:7,1:14:30.46:279,30,0	1/1:9,1:14:15.02:160,15,0	0/0:25,0:26:39.23:0,39,218	0/1:18,1:19:51.35:51,0,153	0/0:27,0:27:0.71:0,1,174	1/1:7,8:15:5.57:270,6,0	0/1:18,0:17:30.98:31,0,67	0/1:18,0:18:40.32:40,0,132	0/1:24,0:24:19.54:20,0,103	0/0:18,0:18:15.47:0,15,214	0/0:15,0:15:33:0,33,350	0/0:27,0:27:60.18:0,60,715	0/0:19,0:19:15.81:0,16,195	0/1:19,0:19:37.05:132,0,37	0/0:20,0:20:10.28:0,10,151	0/0:13,0:13:14.52:0,15,83
chr10	39104121	.	GAGAGAGAGAA	G	414.12	PASS	AB=0.979;AC=12;AF=0.214;AN=56;BaseQRankSum=2.459;DP=506;FS=0.000;HRun=0;HaplotypeScore=174.2885;InbreedingCoeff=0.0943;MQ=50.54;MQ0=13;MQRankSum=-0.744;QD=2.16;ReadPosRankSum=-0.110;VQSLOD=2.5145;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:33.48:0,33,646	0/0:4,0:4:11.86:0,12,292	0/0:18,0:6:11.95:0,12,93	0/0:20,0:7:4.77:0,5,24	0/0:20,0:20:25.19:0,25,372	1/1:14,0:14:5.61:50,6,0	1/1:26,0:24:18.95:140,19,0	0/0:20,0:18:35.92:0,36,304	0/0:17,0:17:27.02:0,27,759	0/0:19,0:18:22.46:0,22,731	0/0:11,0:11:21.74:0,22,171	0/1:16,4:19:40.45:40,0,155	0/0:15,0:14:13.60:0,14,677	0/0:10,0:10:7.89:0,8,188	0/1:18,0:18:2.75:3,0,186	0/0:20,0:20:44.42:0,44,919	0/0:30,0:29:12.91:0,13,884	0/0:14,0:14:6.59:0,7,459	0/1:19,0:18:10.74:11,0,209	0/1:26,0:26:57.57:58,0,173	0/0:16,0:16:15.13:0,15,103	0/0:15,0:15:30.35:0,30,329	0/0:17,0:16:30.61:0,31,209	0/1:25,0:24:89.17:89,0,238	0/0:16,0:16:39.46:0,39,519	0/1:9,0:9:33.64:34,0,111	0/1:24,0:24:54.85:55,0,152	0/1:11,0:11:88.28:88,0,91
chr10	39104131	.	AAGAGAGAGAGAGAGAGAGAG	A	1181.88	PASS	AB=0.840;AC=11;AF=0.212;AN=52;BaseQRankSum=5.590;DP=489;FS=8.284;HRun=0;HaplotypeScore=228.0454;InbreedingCoeff=0.6455;MQ=49.39;MQ0=13;MQRankSum=-2.973;QD=11.26;ReadPosRankSum=-2.736;VQSLOD=1.0451;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:13.11:0,13,1439	0/0:5,0:5:15.04:0,15,689	./.	0/0:12,0:2:0:0,0,0	0/0:18,0:18:12.94:0,13,770	0/0:12,0:12:7.74:0,8,237	0/0:25,0:22:9.46:0,9,183	./.	0/0:15,0:16:21.07:0,21,1562	0/0:19,0:20:42.13:0,42,2438	0/0:9,0:10:2.96:0,3,158	0/0:18,0:19:26.94:0,27,547	0/0:14,0:13:21.07:0,21,1535	0/0:10,0:11:9.03:0,9,485	0/0:11,0:21:6.02:0,6,188	0/0:22,0:22:26.88:0,27,2079	0/0:21,0:26:30.99:0,31,1789	0/0:14,0:14:24.07:0,24,1176	0/1:17,4:19:16.90:196,0,17	1/1:13,11:24:9.96:204,10,0	1/1:11,0:11:1.29:47,1,0	0/0:14,0:14:13.98:0,14,565	0/0:14,0:16:16.75:0,17,503	0/0:27,0:26:45.07:0,45,1335	0/0:17,0:17:10.85:0,11,722	1/1:6,6:12:14.68:294,15,0	1/1:11,12:23:9.93:271,10,0	1/1:6,8:14:6.02:320,6,0
chr10	39104285	.	CAT	C	13606.88	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=10.718;DP=646;FS=2.083;HRun=0;HaplotypeScore=82.8924;InbreedingCoeff=0.9949;MQ=67.42;MQ0=1;MQRankSum=-1.979;QD=43.06;ReadPosRankSum=3.264;VQSLOD=6.7348;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,114,2289	1/1:0,11:11:33.11:538,33,0	0/0:33,0:31:93.32:0,93,1808	0/0:30,0:27:78.26:0,78,1462	1/1:0,23:22:60.20:978,60,0	0/0:17,0:16:51.18:0,51,1035	0/0:23,0:23:69.24:0,69,1373	1/1:0,28:27:78.27:1269,78,0	1/1:0,19:19:42.14:667,42,0	0/0:21,0:21:63.22:0,63,1276	0/0:15,0:15:45.15:0,45,912	0/0:18,0:18:48.15:0,48,914	0/0:18,0:18:54.17:0,54,1047	0/0:19,0:19:54.15:0,54,1055	1/1:0,28:28:75.12:1206,75,0	1/1:0,26:26:75.26:1222,75,0	1/1:0,28:28:66.23:1076,66,0	0/0:21,0:21:63.22:0,63,1263	1/1:0,14:14:39.12:611,39,0	1/1:0,25:24:69.19:1095,69,0	1/1:0,31:31:87.30:1406,87,0	1/1:0,19:19:54.18:881,54,0	0/0:26,0:26:78.27:0,78,1583	0/0:24,0:24:69.24:0,69,1390	0/0:26,0:26:72.25:0,72,1454	1/1:1,23:24:11.24:1025,11,0	1/1:0,22:22:60.16:948,60,0	1/1:0,18:18:42.14:685,42,0
chr10	39105096	.	A	AG	26344.16	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-12.849;DP=711;FS=2.293;HRun=0;HaplotypeScore=62.4212;InbreedingCoeff=0.9992;MQ=81.15;MQ0=0;MQRankSum=-4.776;QD=43.76;ReadPosRankSum=2.085;VQSLOD=5.5050;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,35:35:99:1583,99,0	1/1:0,9:9:24.08:383,24,0	0/0:22,0:22:57.16:0,57,754	0/0:13,0:13:39:0,39,518	1/1:1,22:23:57.19:911,57,0	1/1:0,19:19:57.19:911,57,0	1/1:1,47:48:99:2015,126,0	1/1:3,19:22:57.19:907,57,0	1/1:1,33:34:87.30:1391,87,0	1/1:0,27:27:78.23:1196,78,0	1/1:0,18:18:48.16:766,48,0	0/0:22,0:22:63.20:0,63,862	1/1:0,22:22:60.20:959,60,0	1/1:1,33:34:99:1580,99,0	1/1:0,40:40:99:1823,114,0	1/1:0,20:20:51.17:816,51,0	1/1:0,39:39:99:1821,114,0	1/1:2,22:24:63.21:1007,63,0	1/1:0,17:17:51.17:815,51,0	1/1:1,23:24:60.20:959,60,0	1/1:0,43:43:99:1967,123,0	1/1:0,21:21:54.18:863,54,0	0/0:15,0:15:45.13:0,45,611	0/0:37,0:37:99:0,108,1509	1/1:0,13:13:33.11:528,33,0	1/1:0,32:32:96.31:1512,96,0	1/1:2,27:28:75.26:1199,75,0	1/1:0,9:9:27.09:431,27,0
chr10	39105513	.	ACTAT	A	3104.53	PASS	AB=1.000;AC=27;AF=0.519;AN=52;BaseQRankSum=7.457;DP=616;FS=0.555;HRun=0;HaplotypeScore=102.3850;InbreedingCoeff=0.8345;MQ=64.40;MQ0=3;MQRankSum=0.669;QD=10.82;ReadPosRankSum=-0.427;VQSLOD=2.9660;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:28:3:28,3,0	0/0:6,0:13:15.05:0,15,279	./.	./.	1/1:11,11:22:33.07:454,33,0	1/1:10,10:21:21.06:305,21,0	1/1:9,4:13:9.03:139,9,0	0/0:48,0:46:9.03:0,9,119	0/0:22,0:22:27.09:0,27,628	1/1:18,13:31:42.09:599,42,0	1/1:13,10:23:21.03:287,21,0	1/1:9,11:21:21.06:305,21,0	1/1:15,3:18:9.03:139,9,0	1/1:9,10:19:12.04:185,12,0	0/1:11,0:11:24.36:24,0,331	1/1:10,7:17:12.04:185,12,0	0/0:17,0:36:29.13:0,29,452	1/1:9,10:19:12.04:185,12,0	0/0:24,0:24:18.06:0,18,405	0/0:19,0:19:27.09:0,27,616	0/0:26,0:26:24.07:0,24,516	0/0:23,0:23:27.09:0,27,608	1/1:15,14:29:23.87:338,24,0	1/1:7,8:14:9.03:139,9,0	0/0:10,0:15:9.03:0,9,157	0/0:32,0:32:45.15:0,45,1020	0/0:21,0:21:33.11:0,33,737	0/0:20,0:20:24.08:0,24,472
chr10	39105978	.	T	TAA	1117.94	PASS	AB=1.000;AC=23;AF=0.523;AN=44;BaseQRankSum=-6.997;DP=190;FS=5.601;HRun=4;HaplotypeScore=30.1345;InbreedingCoeff=0.6129;MQ=49.65;MQ0=14;MQRankSum=-2.943;QD=12.15;ReadPosRankSum=-1.390;VQSLOD=-0.7242;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:11:12.29:0,12,106	1/1:1,0:1:0.89:2,1,0	0/0:24,0:6:2.03:0,2,6	0/1:14,0:2:5.99:6,0,19	1/1:10,0:10:0.85:4,1,0	0/0:12,0:12:29.12:0,29,335	./.	1/1:4,9:9:21.07:335,21,0	1/1:4,0:4:0.67:3,1,0	0/0:4,0:6:14.87:0,15,150	0/0:2,0:4:3.01:0,3,35	./.	0/0:4,0:4:9.03:0,9,109	0/0:1,0:2:3.01:0,3,36	1/1:6,0:6:2.87:8,3,0	./.	1/1:8,0:7:8.07:66,8,0	0/0:10,0:9:14.72:0,15,159	1/1:3,6:8:18.06:288,18,0	1/1:1,5:6:9.03:150,9,0	./.	./.	0/0:2,0:4:5.91:0,6,53	./.	0/0:8,0:14:20.92:0,21,218	1/1:4,3:6:12.04:176,12,0	1/1:1,5:6:6.02:86,6,0	1/1:0,8:7:9.03:148,9,0
chr10	39108024	.	C	CT	9399.85	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-18.354;DP=715;FS=4.270;HRun=6;HaplotypeScore=84.4497;InbreedingCoeff=0.9997;MQ=75.21;MQ0=0;MQRankSum=-0.580;QD=33.22;ReadPosRankSum=1.031;VQSLOD=4.8826;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,34:36:96.31:1203,96,0	0/0:13,0:13:33.07:0,33,336	0/0:18,0:18:24.10:0,24,389	0/0:21,0:20:42.50:0,42,396	0/0:28,0:28:69.15:0,69,704	1/1:3,21:24:60.19:755,60,0	1/1:3,25:28:75.24:939,75,0	0/0:29,0:29:75.16:0,75,760	0/0:30,0:30:87.20:0,87,888	1/1:4,29:33:76.42:1098,76,0	1/1:1,22:23:60.15:737,60,0	1/1:3,22:25:63.20:793,63,0	1/1:0,28:28:75.24:943,75,0	1/1:1,24:25:69.21:856,69,0	0/0:34,0:34:96.21:0,96,979	0/0:26,0:26:75.14:0,75,757	0/0:20,0:20:57.10:0,57,572	1/1:1,13:14:39.12:491,39,0	0/0:25,0:25:63.13:0,63,642	0/0:22,0:22:57.12:0,57,582	0/0:25,0:25:66.15:0,66,674	0/0:34,0:34:99:0,99,983	1/1:2,20:22:54.17:679,54,0	1/1:1,24:25:72.23:906,72,0	0/0:32,0:32:93.21:0,93,948	0/0:28,1:29:49.46:0,49,819	0/0:23,0:22:63.14:0,63,643	0/0:22,0:22:63.14:0,63,642
chr10	39108776	.	GA	G	1909.39	PASS	AB=0.749;AC=23;AF=0.411;AN=56;BaseQRankSum=-8.422;DP=541;FS=3.916;HRun=15;HaplotypeScore=75.0728;InbreedingCoeff=0.5529;MQ=48.56;MQ0=15;MQRankSum=4.032;QD=6.70;ReadPosRankSum=3.244;VQSLOD=3.0521;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:23,13:35:24.62:285,25,0	0/0:3,0:4:3.16:0,3,9	0/1:9,1:4:7.64:15,0,8	0/1:8,2:5:9.31:14,0,9	0/0:13,0:28:40.57:0,41,251	1/1:11,9:20:12.69:154,13,0	1/1:8,18:25:2.11:133,2,0	0/0:38,0:42:57.70:0,58,325	0/0:4,0:6:5.82:0,6,37	0/1:16,13:30:28.33:287,0,28	1/1:18,8:26:14.90:199,15,0	1/1:5,16:21:32.03:200,32,0	1/1:9,1:11:18.50:118,19,0	1/1:2,13:16:22.67:137,23,0	0/0:1,0:15:11.12:0,11,53	0/0:3,0:5:11.55:0,12,64	0/0:25,0:30:49.75:0,50,282	1/1:21,6:25:34.30:211,34,0	0/0:9,0:17:14.78:0,15,106	0/0:16,0:20:31.52:0,32,157	0/0:5,0:8:7.38:0,7,36	0/0:7,0:16:33.56:0,34,183	0/1:6,9:15:29.78:82,0,30	1/1:5,9:13:20.68:135,21,0	0/1:13,5:19:20.13:140,0,20	0/0:16,1:21:12.14:0,12,145	0/0:7,0:18:15.06:0,15,92	0/0:9,0:17:17.27:0,17,106
chr10	39109138	.	TA	T	9638.64	PASS	AB=0.625;AC=49;AF=0.875;AN=56;BaseQRankSum=1.807;DP=651;FS=17.388;HRun=12;HaplotypeScore=74.0732;InbreedingCoeff=0.7799;MQ=70.86;MQ0=1;MQRankSum=-2.112;QD=16.36;ReadPosRankSum=3.118;VQSLOD=4.2993;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,29:31:19.82:519,20,0	1/1:0,6:6:14.94:116,15,0	0/0:21,0:17:30.06:0,30,300	0/0:14,0:13:11.51:0,12,95	1/1:8,32:40:54.35:558,54,0	1/1:1,14:15:34.09:276,34,0	1/1:2,15:18:46.86:354,47,0	1/1:7,17:24:54.22:414,54,0	1/1:6,26:32:59.56:463,60,0	1/1:4,24:28:47.20:544,47,0	1/1:6,22:29:16.09:439,16,0	1/1:3,20:23:53.77:418,54,0	1/1:1,16:17:32.85:255,33,0	1/1:3,14:17:32.87:255,33,0	1/1:2,14:16:38.84:302,39,0	1/1:4,16:20:14.37:294,14,0	1/1:2,30:32:86.53:673,87,0	1/1:8,18:26:47.77:371,48,0	0/1:8,12:20:20.58:227,0,21	1/1:7,15:21:32.84:255,33,0	1/1:4,13:17:5.42:225,5,0	1/1:4,31:37:90.71:685,91,0	1/1:4,24:28:40.80:462,41,0	1/1:2,13:15:35.81:275,36,0	0/0:26,0:27:71.96:0,72,706	1/1:7,27:34:23.76:543,24,0	1/1:6,18:24:62.71:482,63,0	1/1:8,10:18:29.83:232,30,0
chr10	39110068	.	TC	T	17421.86	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=6.930;DP=741;FS=2.451;HRun=5;HaplotypeScore=74.7558;InbreedingCoeff=0.9995;MQ=81.07;MQ0=0;MQRankSum=-5.537;QD=29.38;ReadPosRankSum=3.344;VQSLOD=5.4817;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,47:49:99:1462,129,0	1/1:0,8:8:24.07:272,24,0	0/0:25,0:25:71.42:0,71,929	0/0:12,0:12:36.09:0,36,435	1/1:1,22:23:69.14:765,69,0	1/1:0,16:16:45.13:510,45,0	1/1:0,35:35:90.26:1020,90,0	1/1:3,14:17:39.08:423,39,0	1/1:1,34:35:96.27:1088,96,0	1/1:1,22:23:66.04:720,66,0	1/1:1,22:23:57.16:643,57,0	0/0:38,0:38:99:0,114,1437	1/1:1,25:26:63.18:714,63,0	1/1:0,34:34:96.27:1087,96,0	1/1:1,23:24:60.17:680,60,0	1/1:1,25:26:60.10:680,60,0	1/1:2,28:30:66.19:748,66,0	1/1:0,30:30:78.22:884,78,0	1/1:1,16:17:45.12:503,45,0	1/1:0,18:18:51.14:577,51,0	1/1:3,70:73:99:2040,181,0	1/1:3,21:24:59.76:655,60,0	0/0:22,0:22:51.15:0,51,677	0/0:33,0:33:96.30:0,96,1295	0/0:18,0:18:54.18:0,54,738	1/1:1,29:30:87.22:964,87,0	1/1:1,18:19:48.14:544,48,0	1/1:0,13:13:39.11:442,39,0
chr10	39110362	.	TC	T	13266.26	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=13.993;DP=731;FS=0.557;HRun=1;HaplotypeScore=69.1244;InbreedingCoeff=0.9997;MQ=89.81;MQ0=0;MQRankSum=-1.865;QD=38.01;ReadPosRankSum=2.348;VQSLOD=5.4952;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,166,2636	1/1:0,11:11:27.09:378,27,0	0/0:26,0:26:78.25:0,78,1186	0/0:28,0:28:78.24:0,78,1242	1/1:1,19:20:60.19:823,60,0	0/0:23,0:23:69.19:0,69,1034	0/0:20,0:20:60.17:0,60,905	1/1:0,27:27:78.26:1089,78,0	1/1:0,21:21:57.19:797,57,0	0/0:25,0:25:75.25:0,75,1179	0/0:21,0:21:60.20:0,60,949	0/0:34,0:34:99:0,102,1602	0/0:39,0:39:99:0,117,1839	0/0:24,0:24:69.21:0,69,1078	1/1:0,35:35:96.32:1343,96,0	1/1:0,13:13:36.12:504,36,0	1/1:0,36:36:93.31:1301,93,0	0/0:19,0:19:57.15:0,57,874	1/1:0,20:20:60.18:819,60,0	1/1:0,22:22:63.21:881,63,0	1/1:0,46:46:99:1593,114,0	1/1:1,28:29:36.57:1046,37,0	0/0:23,0:23:69.22:0,69,1079	0/0:20,0:20:57.19:0,57,904	0/0:25,0:25:72.22:0,72,1126	1/1:2,32:33:27.36:1266,27,0	1/1:0,24:24:69.23:965,69,0	1/1:0,11:11:33.11:462,33,0
chr10	39111328	.	TTTC	T	421.23	PASS	AB=0.976;AC=10;AF=0.179;AN=56;BaseQRankSum=7.315;DP=529;FS=14.728;HRun=0;HaplotypeScore=82.5237;InbreedingCoeff=-0.0067;MQ=55.37;MQ0=22;MQRankSum=-0.098;QD=2.70;ReadPosRankSum=7.654;VQSLOD=-0.2759;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:30:23.34:0,23,430	0/1:6,0:6:9.23:9,0,13	0/0:42,0:3:2.58:0,3,28	0/0:31,0:6:9.13:0,9,110	0/1:21,0:20:41.43:41,0,100	0/0:15,0:15:17.93:0,18,186	0/0:14,0:14:29.79:0,30,343	0/0:25,0:24:15.36:0,15,229	0/1:17,1:18:99:103,0,116	0/0:11,0:11:24.06:0,24,333	0/0:14,0:14:32.97:0,33,365	0/0:10,0:9:10.31:0,10,195	0/0:13,0:13:24.51:0,25,328	0/0:15,0:15:32.78:0,33,302	0/1:15,2:17:97.54:98,0,148	1/1:9,0:9:6.50:47,7,0	0/1:31,1:32:60.99:171,0,61	0/0:29,0:29:64.99:0,65,729	0/0:21,0:20:29.89:0,30,219	0/0:14,0:14:21.17:0,21,165	0/0:17,0:17:21.13:0,21,123	0/1:19,0:19:54.44:63,0,54	0/0:15,0:14:23.81:0,24,407	0/0:27,0:26:32:0,32,454	0/0:17,0:17:45.94:0,46,634	0/1:21,0:21:25.18:25,0,200	0/1:13,0:13:0.31:0,0,111	0/0:12,0:10:12.43:0,12,116
chr10	39114517	.	AT	A	11131.21	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=5.697;DP=424;FS=8.315;HRun=4;HaplotypeScore=42.5638;InbreedingCoeff=0.9654;MQ=67.55;MQ0=0;MQRankSum=-1.767;QD=31.80;ReadPosRankSum=5.296;VQSLOD=4.4166;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,20:23:20.62:642,21,0	1/1:1,9:10:27.08:324,27,0	0/0:17,0:13:27.08:0,27,376	0/0:7,0:7:12.81:0,13,112	1/1:1,28:29:84.25:1001,84,0	1/1:0,13:13:36.11:432,36,0	1/1:0,12:12:21.06:252,21,0	1/1:3,31:34:93.28:1116,93,0	1/1:0,8:8:21.06:251,21,0	1/1:1,20:21:60.18:718,60,0	1/1:3,17:20:42.13:503,42,0	0/0:10,0:10:27.07:0,27,359	1/1:0,15:15:39.12:468,39,0	1/1:0,11:11:30.09:360,30,0	1/1:2,12:14:33.10:396,33,0	1/1:0,7:7:21.06:252,21,0	1/1:0,25:25:63.19:756,63,0	1/1:0,14:14:42.12:496,42,0	1/1:0,19:18:54.17:647,54,0	1/1:1,19:20:57.17:684,57,0	1/1:0,9:9:21.06:252,21,0	1/1:0,2:2:6.02:69,6,0	0/0:10,0:10:27.08:0,27,358	0/0:7,0:7:18.06:0,18,243	0/0:22,0:22:63.21:0,63,877	1/1:0,20:20:60.18:719,60,0	1/1:0,16:16:48.15:576,48,0	1/1:0,8:8:18.06:216,18,0
chr10	39117261	.	A	AT	3911.94	PASS	AB=0.761;AC=31;AF=0.554;AN=56;BaseQRankSum=-11.107;DP=569;FS=2.361;HRun=14;HaplotypeScore=76.8018;InbreedingCoeff=0.4805;MQ=70.89;MQ0=0;MQRankSum=1.245;QD=10.46;ReadPosRankSum=-2.049;VQSLOD=2.7751;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:30:41.08:0,41,130	0/1:4,8:12:1.26:107,0,1	0/1:18,0:14:11.20:11,0,31	0/1:12,0:8:3.82:4,0,19	1/1:10,18:28:9.28:302,9,0	0/0:6,0:30:51.80:0,52,160	0/0:5,0:20:20.13:0,20,64	0/1:23,11:34:33.45:207,0,33	1/1:5,14:19:16.57:259,17,0	0/0:10,0:21:22.33:0,22,65	0/0:7,0:16:11.83:0,12,45	1/1:5,13:20:13.41:220,13,0	0/0:4,0:22:35.04:0,35,100	0/0:7,0:20:20.04:0,20,58	1/1:8,13:21:21:185,21,0	1/1:3,17:20:41.99:369,42,0	1/1:4,18:23:29.51:365,30,0	0/0:4,0:22:36.63:0,37,106	0/1:10,7:19:15.12:173,0,15	1/1:10,13:23:8.15:183,8,0	1/1:14,7:21:10.73:208,11,0	1/1:7,8:15:15:132,15,0	1/1:2,11:13:19.77:294,20,0	0/1:7,12:19:32.04:245,0,32	0/0:10,1:14:0.41:0,0,106	0/1:17,14:32:26.29:266,0,26	1/1:5,9:15:23.84:198,24,0	1/1:1,7:8:21:185,21,0
chr10	39118228	.	T	TAC	8181.06	PASS	AB=0.650;AC=27;AF=0.482;AN=56;BaseQRankSum=-14.506;DP=637;FS=5.044;HRun=0;HaplotypeScore=79.6756;InbreedingCoeff=0.8924;MQ=63.37;MQ0=6;MQRankSum=0.254;QD=24.42;ReadPosRankSum=2.131;VQSLOD=5.6522;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:71.83:0,72,824	1/1:3,4:7:12.04:192,12,0	0/0:18,0:11:18:0,18,202	0/0:17,0:12:11.93:0,12,111	1/1:5,26:31:39.13:623,39,0	0/0:19,0:19:48.10:0,48,538	0/0:17,0:17:42.10:0,42,480	1/1:15,26:41:46.59:983,47,0	1/1:4,15:20:24.08:383,24,0	0/0:26,0:26:42.12:0,42,495	0/0:32,0:32:81.07:0,81,934	0/0:19,0:20:35.46:0,35,391	0/0:13,0:13:30.06:0,30,336	0/0:14,0:14:39.10:0,39,454	1/1:3,21:23:18.26:779,18,0	1/1:2,16:18:24.08:384,24,0	1/1:2,28:30:51.17:815,51,0	0/0:24,0:24:54.16:0,54,645	0/1:6,7:13:8.92:312,0,9	1/1:12,23:34:12.23:681,12,0	1/1:3,21:26:45.15:719,45,0	1/1:4,21:25:1.96:493,2,0	0/0:33,0:33:87.16:0,87,1008	0/0:10,0:10:21.05:0,21,239	0/0:23,0:23:48.13:0,48,564	1/1:5,19:24:45.83:848,46,0	1/1:2,21:24:38.59:585,39,0	1/1:3,13:16:24.08:384,24,0
chr10	39121242	.	A	ATC	10589.22	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=0.102;DP=529;FS=9.972;HRun=0;HaplotypeScore=89.4059;InbreedingCoeff=0.8944;MQ=68.08;MQ0=5;MQRankSum=-1.557;QD=25.52;ReadPosRankSum=-3.471;VQSLOD=4.6030;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,23:30:27.09:472,27,0	1/1:1,11:12:15.05:267,15,0	0/0:18,0:12:33.72:0,34,439	0/0:26,0:13:33.11:0,33,469	1/1:3,25:28:51.16:932,51,0	1/1:4,13:16:15.05:270,15,0	1/1:2,18:20:22.07:452,22,0	1/1:8,19:26:64.66:995,65,0	1/1:1,17:19:12.04:206,12,0	1/1:3,24:27:71.92:1311,72,0	1/1:0,21:21:42.14:730,42,0	0/0:14,0:14:39.13:0,39,559	1/1:1,13:15:15.05:235,15,0	1/1:1,16:17:21.07:349,21,0	1/1:0,12:12:12.04:196,12,0	1/1:1,10:11:6.02:112,6,0	1/1:2,11:13:12.04:223,12,0	1/1:2,17:18:18.27:320,18,0	1/1:4,13:18:38.97:699,39,0	1/1:1,12:13:24.08:418,24,0	1/1:2,8:9:3.01:56,3,0	1/1:0,11:11:21.07:383,21,0	0/0:12,0:12:33.11:0,33,477	0/0:20,0:20:49.41:0,49,701	0/0:24,0:24:60.20:0,60,884	1/1:4,28:31:90.18:1521,90,0	1/1:2,17:20:8.67:271,9,0	1/1:1,21:23:9.92:171,10,0
chr10	39123345	.	TTA	T	1929.40	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=4.632;DP=224;FS=5.105;HRun=0;HaplotypeScore=24.3387;InbreedingCoeff=0.6698;MQ=56.96;MQ0=19;MQRankSum=-0.021;QD=15.81;ReadPosRankSum=-0.925;VQSLOD=2.4747;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:9,6:14:9.03:110,9,0	0/0:4,0:4:9.03:0,9,132	0/0:7,0:1:3.01:0,3,42	0/0:24,0:4:3:0,3,25	0/0:8,0:8:18.06:0,18,292	1/1:1,7:8:15.05:183,15,0	1/1:2,1:2:3.01:37,3,0	1/1:13,10:16:24.05:271,24,0	0/0:3,0:3:3.01:0,3,37	1/1:3,7:10:18.05:210,18,0	1/1:1,0:1:3.01:37,3,0	0/0:6,0:6:2.99:0,3,23	1/1:3,2:5:6.02:73,6,0	1/1:2,2:4:3.01:37,3,0	0/0:6,0:6:12.04:0,12,195	0/0:3,0:3:9.03:0,9,141	0/0:21,0:19:36.04:0,36,550	1/1:1,6:6:15.05:183,15,0	1/1:4,7:9:18.06:220,18,0	1/1:2,2:4:6.02:73,6,0	1/1:2,2:3:6.02:73,6,0	0/0:3,0:3:3:0,3,25	0/0:3,0:4:3:0,3,26	0/0:5,0:3:2.99:0,3,23	0/0:8,0:8:18.06:0,18,292	1/1:2,7:9:21.06:246,21,0	1/1:2,11:13:21.07:257,21,0	1/1:2,3:4:9.03:110,9,0
chr10	39123817	.	T	TA	3228.29	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=-9.691;DP=528;FS=5.638;HRun=11;HaplotypeScore=51.0619;InbreedingCoeff=0.9569;MQ=73.22;MQ0=2;MQRankSum=-1.141;QD=18.66;ReadPosRankSum=1.048;VQSLOD=4.7774;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:9,23:32:42.81:612,43,0	0/0:8,0:8:20.90:0,21,163	0/0:19,0:16:15.55:0,16,171	0/1:11,0:9:0:0,0,0	0/0:30,2:32:44.22:0,44,524	1/1:4,16:20:24.01:233,24,0	1/1:2,10:12:21.04:213,21,0	0/0:36,0:36:62.64:0,63,481	0/0:17,0:17:38.84:0,39,302	1/1:3,22:25:66.11:662,66,0	1/1:0,9:9:27.05:274,27,0	0/0:12,0:12:32.87:0,33,255	1/1:2,11:13:33.07:335,33,0	1/1:1,18:19:42.08:426,42,0	0/0:14,0:14:35.86:0,36,279	0/0:20,0:20:47.79:0,48,370	0/0:36,0:36:61.21:0,61,598	1/1:5,27:32:35.32:678,35,0	0/0:17,0:17:41.82:0,42,325	0/0:26,0:26:62.72:0,63,488	0/0:7,0:7:14.93:0,15,116	0/0:7,0:7:14.94:0,15,116	0/0:14,0:14:23.89:0,24,186	0/0:7,0:7:11.95:0,12,93	0/0:22,0:22:62.75:0,63,486	0/0:21,0:21:44.79:0,45,348	0/0:29,0:29:76.70:0,77,583	0/0:9,0:9:26.88:0,27,207
chr10	39125403	.	GA	G	1110.65	PASS	AB=0.829;AC=24;AF=0.429;AN=56;BaseQRankSum=0.966;DP=451;FS=8.037;HRun=16;HaplotypeScore=52.6622;InbreedingCoeff=0.2200;MQ=47.58;MQ0=33;MQRankSum=0.720;QD=3.83;ReadPosRankSum=3.336;VQSLOD=-0.1437;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:20,12:27:13.57:66,0,14	1/1:3,2:4:7.92:42,8,0	0/0:17,0:4:7.13:0,7,42	0/1:20,0:4:5.12:5,0,16	1/1:11,11:20:12.58:175,13,0	1/1:4,11:14:20.56:125,21,0	0/1:4,3:6:4.39:47,0,4	0/0:28,0:26:17.38:0,17,260	1/1:8,1:10:7.82:41,8,0	0/1:9,6:15:8.72:75,0,9	0/1:15,8:22:18.78:110,0,19	0/0:7,0:6:5.84:0,6,34	0/1:12,0:13:13.96:16,0,14	0/1:13,2:13:8.67:78,0,9	1/1:5,5:9:2.91:18,3,0	1/1:3,7:11:7.85:42,8,0	0/1:28,5:29:3.06:194,0,3	0/1:18,4:19:28.03:93,0,28	0/0:19,0:20:17.31:0,17,190	0/0:17,0:18:16.26:0,16,121	0/1:8,1:9:5.55:6,0,41	0/0:4,0:4:0.55:0,1,2	0/0:16,0:16:23.71:0,24,205	0/0:5,0:4:2.84:0,3,14	1/1:20,4:24:27.69:153,28,0	0/0:17,0:17:27.73:0,28,197	0/0:17,0:15:3.65:0,4,121	0/0:10,0:8:16.04:0,16,113
chr10	39125869	.	T	TTTTTTTG	5898.48	PASS	AB=1.000;AC=28;AF=0.500;AN=56;BaseQRankSum=2.743;DP=554;FS=7.443;HRun=0;HaplotypeScore=145.6815;InbreedingCoeff=0.8141;MQ=45.07;MQ0=57;MQRankSum=-0.468;QD=20.84;ReadPosRankSum=3.929;VQSLOD=3.4673;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:33:63.75:0,64,609	1/1:10,0:9:11.63:227,12,0	0/0:25,0:5:10.27:0,10,51	0/1:14,0:2:0.39:0,0,14	1/1:26,0:25:3.80:564,4,0	0/0:22,0:21:51.81:0,52,429	0/0:15,0:14:26.44:0,26,233	1/1:27,0:26:28.98:504,29,0	1/1:7,0:5:12.04:247,12,0	0/0:22,0:21:39.88:0,40,313	0/0:26,0:23:56.92:0,57,422	0/0:16,0:14:30.89:0,31,254	0/0:14,0:12:15.83:0,16,91	0/0:15,0:15:38.55:0,39,359	1/1:28,0:24:14.95:720,15,0	1/1:11,0:11:15.03:231,15,0	0/1:23,0:12:25.66:99,0,26	0/0:28,0:18:17.51:0,18,324	1/1:13,9:18:41.50:522,42,0	1/1:27,0:26:49.62:837,50,0	1/1:12,0:9:5.91:97,6,0	1/1:14,0:13:11.74:241,12,0	0/0:17,0:15:32.58:0,33,326	0/0:17,0:16:19.94:0,20,285	0/0:19,0:18:35.09:0,35,276	1/1:27,0:25:12.81:682,13,0	1/1:19,0:18:7.61:595,8,0	1/1:16,0:15:31.81:332,32,0
chr10	39125870	.	T	TTTTTTG	2652.88	PASS	AB=0.872;AC=19;AF=0.339;AN=56;BaseQRankSum=-0.305;DP=561;FS=17.032;HRun=0;HaplotypeScore=101.7436;InbreedingCoeff=0.1168;MQ=44.69;MQ0=59;MQRankSum=3.198;QD=9.02;ReadPosRankSum=2.974;VQSLOD=1.0879;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:32:68.44:0,68,633	1/1:5,0:9:3.20:200,3,0	0/0:25,0:5:11.23:0,11,71	0/1:14,0:2:0.38:0,0,14	0/1:27,0:26:74.57:241,0,75	0/0:22,0:21:53.75:0,54,471	0/0:14,0:13:26.79:0,27,249	0/1:17,10:29:48.12:348,0,48	0/1:7,0:5:4.17:27,0,4	0/0:21,0:20:41.30:0,41,329	0/0:26,0:23:59.55:0,60,451	0/0:15,0:13:30.60:0,31,256	0/0:13,0:11:17.58:0,18,109	0/0:15,0:15:38.83:0,39,396	0/1:29,0:25:48.99:49,0,62	0/1:11,0:11:26.01:81,0,26	0/1:24,0:12:29.07:46,0,29	0/0:29,0:19:37.44:0,37,380	1/1:23,0:19:17.58:352,18,0	0/1:16,7:26:87.74:258,0,88	1/1:12,0:9:5.23:57,5,0	0/1:4,0:14:22.84:135,0,23	0/0:17,0:15:32.65:0,33,333	0/0:17,0:16:20.06:0,20,293	0/0:19,0:18:38.08:0,38,292	0/1:13,13:25:33.30:586,0,33	0/1:18,1:18:31.73:282,0,32	1/1:18,0:17:24.62:164,25,0
chr10	39125871	.	T	TTTTTTG	2108.08	PASS	AB=0.951;AC=17;AF=0.304;AN=56;BaseQRankSum=3.845;DP=570;FS=21.742;HRun=0;HaplotypeScore=105.5086;InbreedingCoeff=-0.1075;MQ=44.29;MQ0=63;MQRankSum=2.492;QD=7.07;ReadPosRankSum=2.704;VQSLOD=0.6890;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:33:65.49:0,65,609	1/1:9,1:8:11.35:235,11,0	0/0:25,0:5:8.67:0,9,58	0/1:14,0:2:0.43:0,0,13	0/1:27,0:26:42.51:423,0,43	0/0:22,0:21:50.77:0,51,449	0/0:16,0:14:23.81:0,24,228	0/1:32,0:31:99:193,0,121	0/1:7,0:5:13.92:14,0,35	0/0:21,0:20:41.27:0,41,328	0/0:26,0:23:59.19:0,59,440	0/0:14,0:12:30.73:0,31,249	0/0:15,0:12:7.83:0,8,96	0/0:15,0:15:38.71:0,39,389	0/1:20,4:25:53.93:54,0,155	0/1:7,4:11:28.46:123,0,28	0/1:21,2:12:55.55:72,0,56	0/0:29,0:19:36.97:0,37,381	0/1:23,0:19:43.97:229,0,44	0/1:28,0:27:99:204,0,144	1/1:12,0:9:5.22:57,5,0	0/1:15,0:14:9.47:153,0,9	0/0:17,0:15:32.65:0,33,332	0/0:17,0:16:23.01:0,23,310	0/0:19,0:18:38.38:0,38,292	0/1:28,0:26:47.07:315,0,47	0/1:19,0:18:99:165,0,109	0/1:18,0:17:25.18:32,0,25
chr10	39125872	.	T	TTTTG	1270.84	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=2.686;DP=571;FS=25.552;HRun=0;HaplotypeScore=90.0019;InbreedingCoeff=-0.1783;MQ=43.87;MQ0=65;MQRankSum=4.281;QD=5.08;ReadPosRankSum=2.930;VQSLOD=-0.1558;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:32:68.48:0,68,588	0/1:10,0:8:19.65:99,0,20	0/0:25,0:5:11.26:0,11,66	0/0:14,0:2:0.42:0,0,15	0/1:27,0:26:99:121,0,112	0/0:22,0:21:53.77:0,54,473	0/0:16,0:14:29.81:0,30,268	0/1:31,0:30:99:176,0,168	0/0:7,0:5:11.39:0,11,68	0/0:20,0:19:41.53:0,42,325	0/0:26,0:23:59.10:0,59,441	0/0:14,0:12:30.93:0,31,247	0/0:15,0:12:7.02:0,7,98	0/0:15,0:15:38.34:0,38,363	0/0:29,0:25:2.91:0,3,190	0/1:11,0:10:26.68:27,0,51	0/1:25,0:12:19.32:19,0,49	0/0:29,0:19:40.92:0,41,345	0/1:24,0:20:38.46:227,0,38	0/1:28,0:27:99:130,0,142	1/1:5,7:9:5.19:56,5,0	0/1:15,0:14:39.58:96,0,40	0/0:17,0:15:32.69:0,33,298	0/0:18,0:16:34.79:0,35,301	0/0:19,0:18:38.74:0,39,284	0/1:28,0:26:78.20:308,0,78	0/1:19,0:18:99:106,0,114	0/1:20,0:18:57.74:58,0,81
chr10	39126046	.	A	AC	3648.31	PASS	AB=0.677;AC=40;AF=0.714;AN=56;BaseQRankSum=-4.127;DP=377;FS=7.906;HRun=10;HaplotypeScore=42.4757;InbreedingCoeff=0.1001;MQ=68.40;MQ0=0;MQRankSum=0.852;QD=11.23;ReadPosRankSum=-2.672;VQSLOD=1.3604;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:10,9:19:32.71:249,0,33	1/1:1,0:4:5.68:28,6,0	0/1:8,0:6:0:0,0,0	0/1:8,1:8:13.95:14,0,16	1/1:10,0:14:26.52:191,27,0	1/1:7,14:21:2.43:231,2,0	0/1:6,10:16:40.77:222,0,41	0/1:7,5:12:12.61:83,0,13	1/1:3,1:14:5.68:28,6,0	1/1:6,10:16:20.39:186,20,0	1/1:3,7:10:11.86:128,12,0	0/0:15,0:15:38.94:0,39,320	0/1:5,10:15:22.24:185,0,22	0/1:6,7:13:18.46:24,0,18	1/1:3,0:14:14.33:77,14,0	1/1:0,0:6:5.72:29,6,0	1/1:6,0:15:8.61:48,9,0	1/1:3,9:12:1.50:172,2,0	1/1:7,13:20:16.39:325,16,0	0/1:4,9:13:0.58:200,0,1	1/1:3,11:14:24.06:256,24,0	1/1:0,0:5:2.94:18,3,0	0/0:14,0:16:37:0,37,279	0/0:20,0:21:50.93:0,51,419	1/1:2,9:11:2.42:231,2,0	0/1:3,16:19:4.31:345,0,4	1/1:6,11:17:8.44:295,8,0	0/1:2,4:6:10.96:84,0,11
chr10	39126955	.	T	TGGG	4174.94	PASS	AB=0.622;AC=43;AF=0.768;AN=56;BaseQRankSum=4.053;DP=550;FS=7.035;HRun=9;HaplotypeScore=120.7516;InbreedingCoeff=0.6468;MQ=80.89;MQ0=0;MQRankSum=-2.502;QD=9.47;ReadPosRankSum=0.642;VQSLOD=0.2731;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:10,0:30:30.08:214,30,0	1/1:4,6:12:6.02:103,6,0	0/0:30,0:26:8.68:0,9,324	0/0:17,0:16:18.09:0,18,121	1/1:15,2:22:8.17:80,8,0	1/1:6,0:21:32.88:255,33,0	1/1:4,0:18:29.70:229,30,0	1/1:10,0:17:7.20:34,7,0	1/1:3,6:9:9.03:171,9,0	1/1:5,0:24:45.17:371,45,0	1/1:6,0:17:25.15:187,25,0	0/0:19,0:19:45.13:0,45,568	1/1:10,2:18:18.04:260,18,0	1/1:3,11:14:21.07:414,21,0	1/1:10,3:18:12.51:211,13,0	1/1:5,9:15:30.08:532,30,0	1/1:6,10:21:33.07:579,33,0	1/1:2,0:19:32.60:229,33,0	0/1:7,0:12:5.65:6,0,28	0/1:5,0:29:11.73:24,0,12	1/1:11,0:29:13.71:30,14,0	1/1:11,1:19:9.50:130,10,0	0/0:24,0:24:66.17:0,66,818	0/0:19,0:19:57.13:0,57,701	1/1:5,0:20:14.92:33,15,0	0/1:7,0:19:11.06:11,0,29	1/1:2,0:22:22.43:48,22,0	1/1:4,0:16:11.21:25,11,0
chr10	39131144	.	G	GAAA	8904.54	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-1.374;DP=585;FS=7.600;HRun=12;HaplotypeScore=90.7329;InbreedingCoeff=0.9234;MQ=65.45;MQ0=15;MQRankSum=-1.730;QD=21.67;ReadPosRankSum=-1.018;VQSLOD=3.3658;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,0:33:53.79:412,54,0	1/1:0,4:4:9.03:153,9,0	0/0:53,0:14:27.98:0,28,233	0/0:49,0:21:11.16:0,11,178	1/1:6,14:25:49.53:667,50,0	1/1:3,0:12:20.92:160,21,0	1/1:4,0:15:23.91:184,24,0	1/1:7,23:33:77.54:1078,78,0	1/1:1,6:9:15.05:259,15,0	1/1:6,1:25:45.25:366,45,0	1/1:4,0:14:32.79:245,33,0	0/0:20,0:20:41.96:0,42,461	1/1:5,0:17:14.45:98,14,0	1/1:3,0:9:11.98:123,12,0	1/1:1,12:15:21.05:353,21,0	1/1:1,10:11:9.03:165,9,0	1/1:10,17:28:39.11:656,39,0	1/1:4,0:15:11.27:135,11,0	1/1:6,19:26:66.66:866,67,0	1/1:8,17:25:42.11:734,42,0	1/1:1,3:4:6.02:110,6,0	1/1:1,6:7:15.05:275,15,0	0/0:15,0:15:28.09:0,28,292	0/0:10,0:10:27.07:0,27,302	0/0:23,0:24:48.64:0,49,570	1/1:12,4:19:32.81:469,33,0	1/1:7,15:22:24.14:419,24,0	1/1:12,22:37:58.42:976,58,0
chr10	39132830	.	GA	G	2841.49	PASS	AB=0.792;AC=30;AF=0.536;AN=56;BaseQRankSum=5.138;DP=553;FS=0.386;HRun=14;HaplotypeScore=64.4550;InbreedingCoeff=0.5126;MQ=56.55;MQ0=8;MQRankSum=2.075;QD=7.87;ReadPosRankSum=4.178;VQSLOD=2.7084;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,3:36:16.17:0,16,520	1/1:2,3:5:8.91:62,9,0	0/0:10,0:6:14.67:0,15,106	0/1:12,1:5:11.69:12,0,32	1/1:4,10:15:21.01:146,21,0	0/0:10,1:11:6.45:0,6,195	0/0:25,2:26:9.81:0,10,353	1/1:11,18:30:49.38:315,49,0	1/1:6,16:23:24.74:307,25,0	0/0:16,1:16:18.39:0,18,295	0/0:14,0:13:28.28:0,28,254	0/0:23,1:24:32.77:0,33,412	0/0:14,0:15:12.29:0,12,231	0/0:21,2:23:3.53:0,4,283	1/1:2,15:18:30.57:278,31,0	1/1:5,20:26:54.38:360,54,0	1/1:10,18:29:15.75:245,16,0	0/0:14,1:15:16.23:0,16,267	0/1:14,4:16:41.40:41,0,54	1/1:11,21:34:36.06:357,36,0	0/1:9,7:16:7.53:91,0,8	1/1:9,9:20:24.83:164,25,0	0/1:13,4:18:40.45:40,0,217	0/1:17,4:22:28.44:28,0,317	1/1:11,5:18:18.59:115,19,0	0/1:11,11:25:15.40:164,0,15	1/1:8,16:24:13.69:239,14,0	1/1:1,4:4:11.90:82,12,0
chr10	39135370	.	T	TATAC	815.66	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=1.754;DP=591;FS=21.829;HRun=0;HaplotypeScore=166.6762;InbreedingCoeff=0.4048;MQ=62.43;MQ0=5;MQRankSum=1.158;QD=5.10;ReadPosRankSum=0.151;VQSLOD=0.8473;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:9.96:0,10,221	0/0:7,0:7:12.01:0,12,122	0/0:35,0:26:57.09:0,57,564	0/0:28,0:21:38.91:0,39,357	0/0:17,0:17:29.90:0,30,289	0/0:15,0:15:24.24:0,24,191	0/0:19,0:18:22.82:0,23,183	0/0:29,0:28:56.79:0,57,466	0/0:23,0:23:33.02:0,33,353	0/1:21,0:21:44.08:44,0,324	0/1:13,0:13:16.83:17,0,114	1/1:25,0:25:14.93:119,15,0	0/1:14,0:13:65.14:65,0,116	0/1:22,0:22:0.05:0,0,129	0/0:27,0:27:41.79:0,42,395	0/0:11,0:11:23.96:0,24,197	0/0:25,0:25:14.47:0,14,244	0/1:20,0:20:46.70:47,0,210	0/0:24,0:24:47.98:0,48,467	0/0:26,0:26:50.95:0,51,485	0/0:22,0:22:26.54:0,27,221	0/0:22,0:22:32.96:0,33,291	1/1:20,0:20:6.01:86,6,0	1/1:21,4:25:41.97:592,42,0	0/0:12,0:12:15.47:0,15,140	0/0:34,0:33:83.76:0,84,768	0/0:29,0:27:65.91:0,66,632	0/0:2,0:2:6:0,6,59
chr10	39135376	.	TACACACACACACACACACACAC	T	6910.30	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=5.535;DP=631;FS=1.196;HRun=0;HaplotypeScore=320.3032;InbreedingCoeff=0.8646;MQ=60.10;MQ0=9;MQRankSum=-3.983;QD=37.15;ReadPosRankSum=1.689;VQSLOD=2.9601;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:21:15.05:0,15,1084	0/0:3,0:6:15.05:0,15,278	0/0:30,0:22:6.02:0,6,103	0/0:24,0:17:9.03:0,9,133	0/0:6,0:18:27.08:0,27,600	0/0:21,0:20:24.08:0,24,1834	0/0:17,0:16:9.03:0,9,813	1/1:21,8:28:15.87:310,16,0	0/0:11,0:24:21.07:0,21,534	0/0:25,0:25:53.85:0,54,3682	0/0:19,0:19:24.08:0,24,2318	0/0:25,0:25:15.05:0,15,1404	0/0:18,0:16:20.95:0,21,1830	0/0:27,0:27:34.06:0,34,2714	0/0:13,0:29:33.10:0,33,655	0/0:10,0:10:9.03:0,9,278	0/0:19,0:25:17.34:0,17,392	0/0:16,0:21:29.77:0,30,1886	1/1:10,18:28:44.76:1299,45,0	1/1:13,16:29:24.08:1259,24,0	1/1:15,11:26:3.01:174,3,0	0/0:15,0:18:18.06:0,18,507	0/0:20,0:20:8.41:0,8,826	0/0:29,0:29:48.16:0,48,4162	0/0:16,0:15:30.57:0,31,2619	1/1:19,16:35:39.12:1969,39,0	1/1:19,17:34:29.84:1721,30,0	1/1:1,1:2:4.57:178,5,0
chr10	39135378	.	C	CAT	609.33	PASS	AB=0.847;AC=5;AF=0.089;AN=56;BaseQRankSum=0.417;DP=621;FS=13.999;HRun=0;HaplotypeScore=158.8298;InbreedingCoeff=0.3241;MQ=57.95;MQ0=11;MQRankSum=2.052;QD=6.41;ReadPosRankSum=2.615;VQSLOD=2.8062;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:21:29.94:0,30,244	0/0:6,0:6:11.97:0,12,95	0/0:27,0:19:57.09:0,57,564	0/0:22,0:15:38.91:0,39,357	0/0:18,0:18:29.80:0,30,219	0/0:20,0:19:30.26:0,30,238	0/0:18,0:17:25.98:0,26,206	0/0:29,0:28:58.64:0,59,474	0/0:23,0:23:32.91:0,33,270	0/0:26,0:26:54.09:0,54,452	0/1:19,0:19:10.70:11,0,133	1/1:4,21:27:15.04:281,15,0	0/0:19,0:16:20.72:0,21,170	0/0:27,0:27:20.82:0,21,184	0/0:27,0:27:41.70:0,42,339	0/0:10,0:10:23.96:0,24,196	0/0:26,0:24:38.57:0,39,272	0/0:19,0:19:16.93:0,17,224	0/0:27,0:27:47.82:0,48,384	0/0:29,0:29:50.75:0,51,387	0/0:25,0:25:26.51:0,27,214	0/0:17,0:17:32.92:0,33,263	0/1:3,16:20:13:106,0,13	0/1:29,0:29:99:331,0,149	0/0:17,0:16:31.32:0,31,295	0/0:35,0:34:83.50:0,83,628	0/0:34,0:32:65.55:0,66,492	0/0:2,0:2:5.97:0,6,45
chr10	39136158	.	T	TA	1696.43	PASS	AB=0.814;AC=20;AF=0.357;AN=56;BaseQRankSum=-6.009;DP=532;FS=0.459;HRun=14;HaplotypeScore=58.5419;InbreedingCoeff=0.5772;MQ=71.25;MQ0=2;MQRankSum=0.697;QD=6.47;ReadPosRankSum=0.779;VQSLOD=2.2295;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:7,18:25:18.81:225,0,19	0/0:13,0:13:25.53:0,26,158	0/1:17,1:17:2.02:2,0,88	0/1:7,0:7:0:0,0,0	0/1:22,3:25:28.85:29,0,212	1/1:8,13:23:38.55:307,39,0	1/1:4,5:9:20.94:176,21,0	0/0:22,3:25:17.10:0,17,226	0/0:21,0:20:35.24:0,35,225	1/1:11,14:26:26.83:321,27,0	1/1:6,14:22:6.73:246,7,0	0/0:16,0:16:29.37:0,29,187	1/1:8,8:17:14.84:120,15,0	1/1:8,13:21:18:158,18,0	0/0:18,2:20:1.68:0,2,222	0/0:23,0:23:61.87:0,62,395	0/0:16,0:16:31.47:0,31,196	0/1:2,11:13:1.26:114,0,1	0/0:25,1:28:13.18:0,13,209	0/0:20,1:22:19.91:0,20,246	0/0:13,0:13:23.41:0,23,149	0/0:16,0:20:28.82:0,29,178	0/0:15,0:15:26.47:0,26,170	0/0:4,0:4:8.85:0,9,56	1/1:3,7:10:15:132,15,0	0/0:29,0:30:25.08:0,25,231	0/1:38,4:45:56.70:57,0,419	0/0:3,0:3:8.87:0,9,58
chr10	39140139	.	G	GA	3577.22	PASS	AB=0.822;AC=27;AF=0.482;AN=56;BaseQRankSum=-4.715;DP=596;FS=14.456;HRun=13;HaplotypeScore=72.2151;InbreedingCoeff=0.3818;MQ=61.03;MQ0=4;MQRankSum=-2.447;QD=9.80;ReadPosRankSum=-1.262;VQSLOD=0.9775;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,1:36:59.39:0,59,427	1/1:1,8:10:17.86:153,18,0	0/0:20,0:9:14.33:0,14,89	0/0:13,0:7:10.58:0,11,57	1/1:16,10:26:62.63:507,63,0	0/0:16,0:18:45.70:0,46,298	0/1:18,2:19:9.11:9,0,221	0/1:20,2:22:51.26:51,0,61	1/1:0,15:15:21.01:191,21,0	0/1:12,1:14:9.61:10,0,152	0/0:23,2:26:2.81:0,3,299	0/0:17,0:17:35.48:0,35,240	0/0:18,0:18:3.20:0,3,179	0/0:16,0:16:25.63:0,26,163	0/1:6,11:17:33.75:141,0,34	1/1:3,13:16:1.73:236,2,0	1/1:9,25:34:24.95:516,25,0	0/0:9,1:13:3.22:0,3,148	1/1:11,10:22:26.71:307,27,0	1/1:19,7:27:12.88:274,13,0	0/1:9,9:18:29.72:116,0,30	1/1:3,12:16:34.10:288,34,0	0/0:25,0:25:44.46:0,44,307	0/1:21,1:25:15.07:15,0,264	0/0:22,2:27:11.56:0,12,321	0/1:28,9:38:43.23:317,0,43	1/1:9,18:28:7.33:336,7,0	1/1:9,6:15:10.75:110,11,0
chr10	39141202	.	T	TA	1947.39	PASS	AB=0.900;AC=16;AF=0.286;AN=56;BaseQRankSum=-8.333;DP=532;FS=5.498;HRun=13;HaplotypeScore=86.3183;InbreedingCoeff=0.6674;MQ=66.11;MQ0=3;MQRankSum=0.748;QD=10.30;ReadPosRankSum=-0.322;VQSLOD=3.0787;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:25:25.64:0,26,196	0/0:12,0:12:25.54:0,26,167	0/0:30,0:13:9.61:0,10,69	0/0:23,0:17:11.46:0,11,72	0/0:32,0:33:75.29:0,75,485	0/1:12,0:12:1:1,0,130	0/0:6,0:7:7.93:0,8,47	1/1:8,22:32:6.14:462,6,0	0/0:12,0:13:16.89:0,17,109	0/0:26,0:27:45.66:0,46,325	0/0:14,0:15:18.82:0,19,178	0/0:16,1:17:15.11:0,15,231	0/0:14,0:15:27.13:0,27,160	0/1:16,0:16:5.68:6,0,89	0/0:19,1:20:13.50:0,13,226	0/1:15,0:15:3.93:4,0,116	0/0:24,0:25:39.36:0,39,228	0/0:19,0:19:36.57:0,37,232	1/1:9,17:25:15.14:361,15,0	1/1:4,15:19:34.27:322,34,0	0/1:2,4:6:5.56:96,0,6	0/0:6,0:7:6.37:0,6,42	0/0:19,1:22:21.25:0,21,263	0/0:8,0:8:16.90:0,17,108	0/0:6,0:24:20.70:0,21,65	1/1:3,23:26:40.41:427,40,0	1/1:6,18:24:15.40:283,15,0	1/1:2,11:13:18.02:167,18,0
chr10	39141226	.	T	TA	5836.42	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-8.697;DP=556;FS=12.980;HRun=10;HaplotypeScore=73.6668;InbreedingCoeff=0.9741;MQ=66.61;MQ0=2;MQRankSum=0.596;QD=21.54;ReadPosRankSum=3.267;VQSLOD=4.9282;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,22:29:42.58:447,43,0	1/1:2,8:10:21.05:224,21,0	0/0:26,0:14:17.33:0,17,126	0/0:16,0:14:16:0,16,89	1/1:6,26:33:77.66:767,78,0	1/1:1,15:17:45.10:473,45,0	1/1:0,6:6:18.05:192,18,0	0/0:38,0:38:65.86:0,66,536	1/1:2,14:16:33.08:351,33,0	1/1:9,21:31:54.12:563,54,0	1/1:2,14:16:39.94:405,40,0	0/0:22,1:23:47.87:0,48,392	1/1:3,13:16:39.10:416,39,0	1/1:2,13:15:36.09:382,36,0	1/1:4,13:17:5.50:264,6,0	1/1:3,11:15:20.68:251,21,0	1/1:5,23:28:57.14:608,57,0	1/1:3,9:13:26.90:270,27,0	0/0:25,0:25:50.82:0,51,407	0/0:16,1:18:14.99:0,15,319	0/0:7,0:7:17.97:0,18,148	1/1:1,7:8:21.05:224,21,0	0/0:25,0:25:59.89:0,60,492	0/0:7,0:7:20.94:0,21,167	0/0:30,0:31:58.95:0,59,474	0/0:30,0:30:74.85:0,75,610	0/0:24,0:24:41.88:0,42,338	0/0:14,0:14:29.97:0,30,246
chr10	39141379	.	CCTAT	C	11313.08	PASS	AB=1.000;AC=33;AF=0.589;AN=56;BaseQRankSum=-8.453;DP=642;FS=2.738;HRun=0;HaplotypeScore=154.5089;InbreedingCoeff=0.6374;MQ=58.60;MQ0=2;MQRankSum=7.025;QD=25.14;ReadPosRankSum=1.661;VQSLOD=5.0160;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:52.08:0,52,676	1/1:0,8:8:8.99:136,9,0	0/0:18,0:13:18.09:0,18,516	0/0:9,0:8:21.06:0,21,367	1/1:2,16:18:32.98:559,33,0	0/0:11,0:11:21.07:0,21,143	0/1:13,0:13:45.46:53,0,45	1/1:1,22:23:65.90:668,66,0	1/1:1,24:25:48.16:927,48,0	0/1:24,0:24:99:221,0,199	0/1:23,0:23:45.91:46,0,107	0/0:28,0:28:55.55:0,56,632	0/1:27,0:27:54.96:55,0,244	0/0:18,0:18:23.95:0,24,195	1/1:1,23:24:42.14:812,42,0	1/1:0,25:25:45.15:866,45,0	1/1:0,29:29:45.09:829,45,0	0/0:24,0:24:19.01:0,19,304	1/1:1,32:34:95.87:1135,96,0	1/1:1,30:32:60.01:985,60,0	1/1:0,39:39:60.21:1160,60,0	1/1:0,10:10:21.07:406,21,0	0/0:19,0:19:24.01:0,24,361	0/1:20,0:20:5:5,0,105	0/0:19,0:19:44.69:0,45,563	1/1:1,30:31:90.12:1348,90,0	1/1:0,26:26:29.69:579,30,0	1/1:0,19:19:27.09:522,27,0
chr10	39141382	.	A	ATCTGTCTG	4110.39	PASS	AB=0.649;AC=22;AF=0.393;AN=56;BaseQRankSum=-1.342;DP=661;FS=7.071;HRun=0;HaplotypeScore=215.3704;InbreedingCoeff=0.8501;MQ=58.33;MQ0=2;MQRankSum=0.120;QD=14.03;ReadPosRankSum=0.387;VQSLOD=1.6096;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:46,0:46:80.66:854,81,0	0/0:8,0:8:6.02:0,6,112	0/0:19,0:13:12.03:0,12,226	0/0:11,0:10:14.91:0,15,197	0/0:17,0:17:27.09:0,27,487	1/1:12,0:12:14.97:186,15,0	1/1:13,0:13:5.99:83,6,0	0/0:22,0:22:11.93:0,12,155	0/0:25,0:25:48.16:0,48,889	1/1:22,0:22:26.96:302,27,0	1/1:23,0:23:14.93:112,15,0	1/1:13,15:34:23.83:982,24,0	1/1:27,0:27:32.62:317,33,0	1/1:18,0:18:23.90:181,24,0	0/0:23,0:23:42.14:0,42,782	0/0:25,0:25:43.96:0,44,787	0/0:29,0:29:42.14:0,42,764	1/1:21,0:21:32.86:249,33,0	0/0:33,0:33:32.39:0,32,542	0/0:32,0:32:48:0,48,868	0/0:39,0:39:60.20:0,60,1073	0/0:10,0:10:21.07:0,21,391	0/1:10,7:22:0:0,0,0	0/1:12,7:28:46.62:233,0,47	1/1:9,10:25:14.83:612,15,0	0/0:30,0:30:51.38:0,51,870	0/0:26,0:26:29.99:0,30,540	0/0:19,0:19:27.09:0,27,501
chr10	39141390	.	G	GTCTA	6849.73	PASS	AB=1.000;AC=18;AF=0.321;AN=56;BaseQRankSum=-3.775;DP=713;FS=5.077;HRun=0;HaplotypeScore=177.9879;InbreedingCoeff=0.7880;MQ=57.69;MQ0=2;MQRankSum=-2.339;QD=25.28;ReadPosRankSum=3.154;VQSLOD=4.4486;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,49:53:81.16:2174,81,0	0/0:9,0:9:14.97:0,15,159	0/0:22,0:14:29.64:0,30,434	0/0:13,0:13:26.15:0,26,375	0/0:19,0:19:33.03:0,33,461	1/1:1,14:16:15.05:403,15,0	1/1:2,13:15:8.68:177,9,0	0/0:21,0:21:48:0,48,473	0/0:26,0:26:54.14:0,54,782	1/1:3,20:24:62.49:960,62,0	1/1:0,21:22:14.93:404,15,0	0/1:39,0:38:99:219,0,187	1/1:4,24:29:33.03:860,33,0	1/1:0,21:21:24.08:647,24,0	0/0:25,0:25:51.12:0,51,727	0/0:25,0:25:51.12:0,51,723	0/0:30,0:30:54.10:0,54,738	1/1:2,23:25:17.13:869,17,0	0/0:32,0:32:71.99:0,72,796	0/0:33,0:33:62.96:0,63,833	0/0:42,0:42:69.18:0,69,999	0/0:12,0:12:21.07:0,21,327	0/0:22,0:22:17.97:0,18,146	0/0:32,0:32:2.88:0,3,154	0/1:27,0:26:99:138,0,146	0/0:32,0:32:92.94:0,93,1126	0/0:30,0:30:50.82:0,51,614	0/0:16,0:16:27.09:0,27,411
chr10	39142323	.	GA	G	1759.85	PASS	AB=0.687;AC=35;AF=0.625;AN=56;BaseQRankSum=6.033;DP=510;FS=4.635;HRun=16;HaplotypeScore=61.6194;InbreedingCoeff=0.2019;MQ=58.02;MQ0=6;MQRankSum=-0.625;QD=4.37;ReadPosRankSum=5.039;VQSLOD=1.0078;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,12:26:31.05:212,31,0	1/1:3,2:5:5.79:36,6,0	0/0:13,0:4:5.82:0,6,33	0/0:8,0:2:1.54:0,2,13	0/1:16,10:26:35.90:116,0,36	0/1:5,7:13:43.50:81,0,43	1/1:9,15:28:48.26:262,48,0	1/1:7,0:21:22.26:64,22,0	1/1:7,9:16:1.40:118,1,0	0/1:7,14:21:21.32:114,0,21	0/1:12,2:17:4.41:68,0,4	0/0:18,1:22:16.14:0,16,264	0/1:8,5:13:28.95:54,0,29	1/1:7,8:14:11.71:72,12,0	0/1:10,6:15:50.66:51,0,52	0/1:5,4:12:17.71:62,0,18	0/1:12,11:26:21.19:95,0,21	1/1:12,14:31:14.24:176,14,0	1/1:6,0:17:9.45:42,9,0	1/1:5,2:14:13.95:59,14,0	1/1:4,1:13:16.25:47,16,0	0/1:12,8:20:51.69:66,0,52	0/0:13,0:13:20.87:0,21,160	0/0:22,0:28:33.46:0,33,276	0/0:22,1:23:23.89:0,24,298	1/1:7,0:23:28.43:82,28,0	1/1:6,0:19:18.31:53,18,0	1/1:2,0:9:4.06:12,4,0
chr10	39143163	.	TA	T	5828.68	PASS	AB=0.800;AC=45;AF=0.804;AN=56;BaseQRankSum=1.326;DP=399;FS=6.911;HRun=12;HaplotypeScore=46.6801;InbreedingCoeff=0.7189;MQ=68.25;MQ0=0;MQRankSum=-1.012;QD=16.94;ReadPosRankSum=3.664;VQSLOD=5.7954;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,16:21:47.80:371,48,0	1/1:0,4:4:8.97:70,9,0	0/0:19,0:14:21.82:0,22,162	0/0:6,0:7:3.69:0,4,35	1/1:5,30:37:87.67:654,88,0	1/1:3,16:19:44.81:348,45,0	1/1:1,6:7:11.48:92,11,0	1/1:10,26:37:52.20:571,52,0	1/1:2,5:7:14.94:116,15,0	1/1:1,13:14:38.85:302,39,0	1/1:3,12:14:5.51:225,6,0	0/0:5,0:5:12.02:0,12,122	1/1:2,11:13:26.89:209,27,0	1/1:1,7:8:17.93:139,18,0	1/1:2,13:16:37.89:284,38,0	1/1:5,14:19:14.42:295,14,0	1/1:5,18:25:54.87:406,55,0	1/1:2,12:14:35.86:279,36,0	1/1:4,7:11:20.60:151,21,0	1/1:1,6:7:17.89:135,18,0	1/1:3,3:6:2.98:23,3,0	1/1:0,3:3:5.97:46,6,0	0/1:3,1:4:14.22:14,0,52	0/0:4,0:4:6.01:0,6,61	0/0:18,0:18:45.08:0,45,452	1/1:2,15:17:44.82:348,45,0	1/1:4,22:27:61.80:470,62,0	1/1:0,13:13:35.86:279,36,0
chr10	39146169	.	G	GTA	8324.30	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-15.616;DP=643;FS=16.740;HRun=0;HaplotypeScore=67.5777;InbreedingCoeff=0.9764;MQ=70.01;MQ0=1;MQRankSum=0.161;QD=45.74;ReadPosRankSum=-1.938;VQSLOD=4.1105;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:66.18:0,66,926	0/0:11,0:11:33.09:0,33,465	0/0:20,0:20:54:0,54,725	0/0:17,0:17:42.10:0,42,543	0/0:34,0:34:96.32:0,96,1409	0/0:19,0:19:51.15:0,51,730	0/0:23,0:23:63.67:0,64,909	1/1:3,32:36:99:1684,99,0	0/0:18,0:18:54.17:0,54,776	0/0:26,0:26:78.25:0,78,1131	0/0:19,0:19:51.17:0,51,747	0/0:13,0:13:39.13:0,39,574	0/0:22,0:22:66.22:0,66,971	0/0:25,0:25:69.19:0,69,970	0/0:19,0:19:54.18:0,54,795	0/0:17,0:17:48.16:0,48,705	0/0:31,0:31:90.26:0,90,1281	0/0:24,0:24:72.24:0,72,1060	1/1:5,15:20:51.07:802,51,0	1/1:2,29:31:75.26:1392,75,0	1/1:2,28:32:81.28:1517,81,0	0/0:27,0:27:75.24:0,75,1081	0/0:30,0:30:87.27:0,87,1258	0/0:22,0:22:60.20:0,60,883	0/0:19,0:19:54.13:0,54,731	1/1:3,29:32:4.91:1471,5,0	1/1:0,18:17:45.15:843,45,0	1/1:0,13:13:33.11:616,33,0
chr10	39147369	.	GA	G	3151.95	PASS	AB=0.831;AC=15;AF=0.268;AN=56;BaseQRankSum=7.965;DP=671;FS=3.861;HRun=12;HaplotypeScore=118.5814;InbreedingCoeff=0.7195;MQ=76.74;MQ0=1;MQRankSum=0.103;QD=13.36;ReadPosRankSum=-0.625;VQSLOD=3.0223;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,2:37:55.52:0,56,810	0/0:9,0:9:24.02:0,24,235	0/0:21,0:20:15.30:0,15,273	0/1:18,0:17:3.72:4,0,75	0/0:25,3:29:8.26:0,8,605	0/0:30,0:32:86.83:0,87,846	0/1:12,2:16:4.25:4,0,291	1/1:4,19:23:1.83:375,2,0	0/0:22,1:23:30.85:0,31,487	0/0:22,0:22:48.08:0,48,480	0/0:18,2:20:30.84:0,31,481	0/0:12,0:12:33.05:0,33,323	0/0:23,0:23:66.12:0,66,663	0/0:23,2:25:13.63:0,14,493	0/0:17,2:20:10.46:0,10,449	0/0:18,1:20:33.87:0,34,520	0/0:25,1:26:42.88:0,43,611	0/0:24,1:25:45.88:0,46,635	0/1:9,15:26:9.02:285,0,9	1/1:7,25:33:73.66:557,74,0	1/1:3,31:34:77.68:604,78,0	0/0:20,0:20:57.03:0,57,562	0/0:26,1:28:51.75:0,52,691	0/0:18,0:18:48.07:0,48,474	0/0:23,0:24:53.92:0,54,521	1/1:7,27:38:85.81:625,86,0	1/1:4,31:35:86.65:673,87,0	1/1:1,11:12:26.88:209,27,0
chr10	39150607	.	GACA	G	21678.95	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=7.392;DP=609;FS=0.357;HRun=0;HaplotypeScore=106.3691;InbreedingCoeff=0.9995;MQ=87.86;MQ0=0;MQRankSum=-7.783;QD=46.92;ReadPosRankSum=3.655;VQSLOD=6.7675;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,37:37:81.23:1473,81,0	1/1:0,11:11:30.10:559,30,0	0/0:26,0:26:75.09:0,75,1686	0/0:26,0:26:69.14:0,69,1464	1/1:0,22:22:48:858,48,0	1/1:0,16:16:48.16:890,48,0	1/1:0,35:35:90.31:1677,90,0	1/1:0,15:15:45.14:806,45,0	1/1:0,19:19:54.19:1006,54,0	1/1:0,28:28:72.09:1270,72,0	1/1:0,13:13:30.10:556,30,0	0/0:30,0:30:90.30:0,90,2169	1/1:0,13:13:30.10:559,30,0	1/1:0,22:22:54.19:993,54,0	1/1:0,14:14:33.11:614,33,0	1/1:0,15:15:36.12:670,36,0	1/1:0,26:26:56.77:1062,57,0	1/1:0,16:16:45.07:839,45,0	1/1:0,25:25:75.21:1301,75,0	1/1:0,23:23:60.21:1117,60,0	1/1:0,41:41:96.33:1789,96,0	1/1:0,22:22:54.19:1004,54,0	0/0:20,0:20:57.20:0,57,1379	0/0:28,0:28:84.23:0,84,1966	0/0:17,0:17:51.18:0,51,1257	1/1:0,23:23:69.20:1243,69,0	1/1:0,16:16:45.15:837,45,0	1/1:0,10:10:30.10:556,30,0
chr10	39152237	.	A	AG	27257.06	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-4.413;DP=693;FS=6.438;HRun=0;HaplotypeScore=78.5646;InbreedingCoeff=0.9705;MQ=76.23;MQ0=0;MQRankSum=-8.429;QD=42.59;ReadPosRankSum=7.890;VQSLOD=4.3263;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,34:34:90.31:1437,90,0	1/1:0,10:10:30.10:478,30,0	0/0:30,0:30:80.34:0,80,1041	0/0:23,0:22:54.32:0,54,694	1/1:0,35:35:93.08:1368,93,0	1/1:0,35:35:96.33:1528,96,0	1/1:0,27:27:78.27:1243,78,0	1/1:1,42:43:99:1923,126,0	1/1:0,24:24:66.23:1053,66,0	1/1:0,20:20:57.19:911,57,0	1/1:1,34:35:90.30:1403,90,0	1/1:0,17:17:45.15:718,45,0	1/1:0,22:22:60.20:958,60,0	1/1:0,19:19:51.17:813,51,0	1/1:0,32:32:81.28:1293,81,0	1/1:0,22:22:63.21:1006,63,0	1/1:1,19:20:51.17:814,51,0	1/1:2,20:22:42.23:891,42,0	1/1:0,22:20:60.15:864,60,0	1/1:0,30:30:90.10:1305,90,0	1/1:1,28:29:72.25:1150,72,0	1/1:1,20:21:54.18:860,54,0	1/1:0,16:16:45.15:702,45,0	1/1:0,18:18:42.14:671,42,0	1/1:0,24:24:66.22:1039,66,0	1/1:0,25:25:75.21:1147,75,0	1/1:1,34:35:98.36:1538,98,0	1/1:0,3:3:9.03:144,9,0
chr10	39156540	.	GT	G	2253.39	PASS	AB=0.976;AC=15;AF=0.268;AN=56;BaseQRankSum=10.719;DP=536;FS=7.189;HRun=9;HaplotypeScore=54.7085;InbreedingCoeff=0.8702;MQ=72.13;MQ0=6;MQRankSum=2.330;QD=15.23;ReadPosRankSum=1.642;VQSLOD=3.4067;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:81.22:0,81,923	1/1:2,2:4:3:27,3,0	0/1:37,1:20:6.50:7,0,126	0/0:45,1:13:6.43:0,6,129	1/1:0,26:26:77.91:688,78,0	0/0:23,0:23:60.18:0,60,692	0/0:13,0:13:30.05:0,30,318	0/0:25,0:25:60.15:0,60,668	1/1:0,12:12:36.02:330,36,0	0/0:22,0:22:60.15:0,60,664	0/0:13,0:13:36.11:0,36,415	0/0:15,0:15:42.11:0,42,474	0/0:13,0:13:30.09:0,30,346	0/0:10,0:10:21.04:0,21,222	1/1:2,11:13:33.02:302,33,0	1/1:2,22:24:57.03:522,57,0	1/1:5,19:24:19.41:432,19,0	0/0:16,0:16:39.12:0,39,450	0/0:12,1:13:32.98:0,33,354	0/0:29,1:30:58.30:0,58,880	0/0:9,0:9:22.62:0,23,246	1/1:0,5:5:15.01:137,15,0	0/0:7,0:7:21.05:0,21,232	0/0:10,0:9:30.09:0,30,346	0/0:23,0:24:56.97:0,57,613	0/0:30,0:30:81.24:0,81,935	0/0:20,0:20:48.11:0,48,532	0/0:15,0:15:42.05:0,42,448
chr10	39158473	.	AAGAAGCAG	A	25242.30	PASS	AB=0.914;AC=31;AF=0.554;AN=56;BaseQRankSum=20.719;DP=803;FS=0.570;HRun=0;HaplotypeScore=218.2455;InbreedingCoeff=0.9276;MQ=78.15;MQ0=0;MQRankSum=-22.058;QD=57.90;ReadPosRankSum=6.921;VQSLOD=4.4146;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,47:58:99:2778,99,0	1/1:1,15:16:41.70:1188,42,0	0/0:32,0:32:87.26:0,87,3382	0/0:29,0:29:78.19:0,78,2876	1/1:3,16:19:36.12:958,36,0	1/1:0,18:18:48.16:1358,48,0	1/1:1,17:18:30.10:849,30,0	0/0:41,0:41:99:0,117,4560	1/1:2,20:22:54.19:1527,54,0	1/1:3,19:22:60.18:1593,60,0	1/1:2,14:16:42.10:1123,42,0	0/0:32,0:32:93.32:0,93,3726	1/1:1,35:36:93.16:2624,93,0	1/1:0,22:22:60.21:1697,60,0	1/1:1,41:42:99:2970,105,0	1/1:4,39:43:93.19:2629,93,0	1/1:3,29:32:60.21:1675,60,0	1/1:2,18:20:36.12:971,36,0	0/0:21,0:21:63.22:0,63,2444	0/0:24,0:24:66.23:0,66,2781	0/0:42,0:42:99:0,120,4932	1/1:1,18:20:45.15:1136,45,0	0/0:23,0:23:66.23:0,66,2700	0/0:45,0:45:99:0,135,5528	0/0:20,0:20:60.18:0,60,2550	0/1:29,3:32:99:167,0,3227	0/0:47,0:46:99:0,129,5302	0/0:11,0:11:33.10:0,33,1088
chr10	39159884	.	AGAAGGAAG	A	4844.19	PASS	AC=20;AF=0.385;AN=52;BaseQRankSum=4.364;DP=725;FS=1.117;HRun=0;HaplotypeScore=179.6737;InbreedingCoeff=0.9457;MQ=53.98;MQ0=6;MQRankSum=-6.411;QD=17.06;ReadPosRankSum=-0.395;VQSLOD=4.2913;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:46:33.11:0,33,1118	0/0:11,0:11:12.02:0,12,259	./.	./.	0/0:10,0:13:9.03:0,9,327	0/0:14,0:14:18.06:0,18,721	0/0:25,0:26:24.07:0,24,790	1/1:23,5:27:15.03:178,15,0	0/0:19,0:28:18.06:0,18,494	0/0:19,0:28:33.99:0,34,959	0/0:10,0:14:15.05:0,15,445	1/1:8,0:25:24.55:447,25,0	0/0:23,0:23:30.10:0,30,1215	0/0:35,0:35:42.14:0,42,1576	0/0:19,0:33:39.12:0,39,1062	0/0:11,0:26:27.09:0,27,797	0/0:15,0:26:12.04:0,12,283	0/0:17,0:20:9.03:0,9,329	1/1:15,7:21:21.05:402,21,0	1/1:20,13:32:24.08:595,24,0	1/1:15,13:28:13.77:256,14,0	0/0:14,0:23:30.10:0,30,973	1/1:13,0:21:12.04:219,12,0	1/1:35,0:47:9.03:168,9,0	0/0:33,0:32:63.20:0,63,2222	1/1:9,14:23:41.20:1018,41,0	1/1:16,16:31:42.14:965,42,0	1/1:12,13:24:24.08:595,24,0
chr10	39161576	.	GA	G	4607.22	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=12.657;DP=636;FS=2.355;HRun=9;HaplotypeScore=67.0334;InbreedingCoeff=0.9989;MQ=74.39;MQ0=0;MQRankSum=-0.091;QD=22.70;ReadPosRankSum=2.068;VQSLOD=5.8619;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,26:31:69.03:632,69,0	0/0:9,0:10:29.92:0,30,326	0/0:23,0:22:23.39:0,23,372	0/0:16,0:14:24.82:0,25,267	0/0:40,0:40:99:0,111,1255	1/1:1,23:24:66.04:604,66,0	1/1:2,18:20:54.03:494,54,0	0/0:21,0:21:48.12:0,48,537	0/0:31,0:31:84.24:0,84,959	1/1:4,21:25:63.02:571,63,0	1/1:4,20:24:60.03:549,60,0	0/0:23,0:23:69.20:0,69,789	1/1:4,16:20:48.02:439,48,0	1/1:3,17:20:48.02:439,48,0	0/0:14,0:14:39.11:0,39,443	0/0:24,0:24:63.19:0,63,727	0/0:20,0:19:29.74:0,30,575	1/1:3,14:17:36.02:330,36,0	0/0:12,0:12:33.07:0,33,360	0/0:30,0:30:81.23:0,81,924	0/0:26,0:26:63.19:0,63,727	0/0:23,0:23:57.17:0,57,658	0/0:28,0:28:81.24:0,81,930	0/0:19,2:21:26.65:0,27,546	1/1:1,21:22:60.03:549,60,0	0/0:24,0:24:66.20:0,66,762	0/0:27,0:27:75.21:0,75,851	0/0:19,0:20:57.16:0,57,650
chr10	39162688	.	TA	T	5066.31	PASS	AB=0.538;AC=29;AF=0.518;AN=56;BaseQRankSum=10.329;DP=468;FS=6.515;HRun=10;HaplotypeScore=52.3367;InbreedingCoeff=0.9058;MQ=64.14;MQ0=3;MQRankSum=1.550;QD=21.47;ReadPosRankSum=5.118;VQSLOD=5.4459;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,23:26:41.68:499,42,0	1/1:1,6:7:18:156,18,0	0/0:19,0:13:6.24:0,6,275	0/0:8,0:6:12.17:0,12,105	1/1:0,21:21:56.96:494,57,0	1/1:3,6:9:17.99:156,18,0	1/1:0,7:8:20.03:162,20,0	0/0:26,2:28:43.56:0,44,680	1/1:2,12:14:35.99:313,36,0	1/1:1,13:14:38.99:338,39,0	1/1:2,26:28:74.97:650,75,0	0/0:10,0:10:24.06:0,24,266	1/1:2,11:13:29.99:260,30,0	1/1:0,14:14:41.99:364,42,0	1/1:2,16:18:44.99:391,45,0	1/1:1,20:21:56.99:495,57,0	1/1:2,13:15:32.98:286,33,0	1/1:5,16:21:42.41:366,42,0	0/0:19,0:19:57.15:0,57,631	0/0:19,1:20:25.03:0,25,485	0/0:16,0:16:42.09:0,42,453	0/1:1,6:7:12.19:135,0,12	0/0:12,0:12:17.04:0,17,286	0/0:9,0:9:23.65:0,24,243	0/0:20,1:21:25.16:0,25,505	0/0:16,0:16:13.18:0,13,364	0/0:24,1:25:43.12:0,43,696	0/0:28,1:29:39.94:0,40,778
chr10	39163315	.	TA	T	12418.60	PASS	AB=1.000;AC=45;AF=0.804;AN=56;BaseQRankSum=11.379;DP=610;FS=8.371;HRun=7;HaplotypeScore=73.0446;InbreedingCoeff=0.8760;MQ=71.34;MQ0=0;MQRankSum=-3.243;QD=23.84;ReadPosRankSum=1.500;VQSLOD=5.0612;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,30:34:85.74:859,86,0	1/1:1,5:6:15.03:153,15,0	0/0:11,0:11:21.01:0,21,240	0/1:11,0:11:11.97:12,0,162	1/1:3,23:26:63.13:642,63,0	1/1:4,20:24:54.12:551,54,0	1/1:1,21:22:51.11:520,51,0	1/1:9,34:42:99:1000,99,0	1/1:1,19:20:54.12:551,54,0	1/1:2,27:29:78.16:789,78,0	1/1:3,27:30:72.16:735,72,0	0/0:20,0:20:39.12:0,39,490	1/1:2,14:16:33.07:337,33,0	1/1:1,15:16:39.09:398,39,0	1/1:3,13:16:30.07:306,30,0	1/1:1,14:15:32.97:335,33,0	1/1:3,24:27:69.16:704,69,0	1/1:2,12:14:8.25:254,8,0	1/1:5,23:28:69.13:695,69,0	1/1:1,30:31:84.18:855,84,0	1/1:6,12:18:33.07:337,33,0	1/1:3,15:18:42.09:429,42,0	0/0:31,0:31:87.20:0,87,1036	0/0:11,0:11:33.11:0,33,415	0/0:16,0:16:45.14:0,45,566	1/1:2,22:24:66.15:673,66,0	1/1:2,24:26:63.14:643,63,0	1/1:1,26:27:63.14:643,63,0
chr10	39165586	.	T	TGGG	3114	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=4.463;DP=701;FS=6.196;HRun=8;HaplotypeScore=121.1958;InbreedingCoeff=0.9573;MQ=75.55;MQ0=0;MQRankSum=-5.998;QD=18.87;ReadPosRankSum=-5.884;VQSLOD=-0.3038;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:19,1:27:10.75:143,11,0	0/0:15,0:15:36.11:0,36,470	0/0:20,0:20:30.01:0,30,361	0/0:19,0:19:13.76:0,14,389	0/0:25,0:26:61.73:0,62,823	1/1:8,11:20:33.08:570,33,0	1/1:6,12:18:30.10:598,30,0	0/0:33,0:33:69.13:0,69,861	0/0:21,0:21:51.15:0,51,670	1/1:9,6:17:18.06:355,18,0	1/1:7,6:17:10.21:106,10,0	0/0:26,0:26:72.22:0,72,946	1/1:11,12:26:36.06:625,36,0	1/1:14,9:24:54.04:814,54,0	0/0:33,0:33:90.24:0,90,1167	0/0:20,0:20:60.20:0,60,788	0/0:35,0:35:87.25:0,87,1143	1/1:9,0:16:6.02:104,6,0	0/0:30,0:30:84.25:0,84,1094	0/0:29,0:29:75.22:0,75,971	0/0:24,0:24:63.19:0,63,825	0/0:35,0:35:90.27:0,90,1182	0/0:25,0:25:54.15:0,54,708	0/0:30,0:30:75.16:0,75,967	0/0:28,0:28:78.23:0,78,1024	0/0:32,0:32:31.10:0,31,1047	0/0:49,0:51:99:0,133,1754	0/0:4,0:4:12.04:0,12,158
chr10	39168450	.	T	TA	8188.44	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-5.328;DP=485;FS=1.580;HRun=6;HaplotypeScore=45.4031;InbreedingCoeff=0.9656;MQ=58.15;MQ0=2;MQRankSum=-0.573;QD=31.02;ReadPosRankSum=1.053;VQSLOD=5.2073;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,24:26:39.66:783,40,0	1/1:0,6:6:18.06:226,18,0	0/0:2,0:2:3.01:0,3,31	0/0:5,0:5:9:0,9,85	1/1:2,26:28:66.08:777,66,0	1/1:0,17:17:48.15:604,48,0	1/1:6,14:20:48.13:578,48,0	0/0:26,0:25:66.12:0,66,656	1/1:2,8:10:27.09:337,27,0	1/1:0,22:22:63.16:764,63,0	1/1:2,22:24:63.20:789,63,0	0/0:17,0:17:45.10:0,45,459	1/1:0,13:12:33.11:415,33,0	1/1:2,9:11:24.08:302,24,0	1/1:2,10:12:27.09:339,27,0	1/1:1,15:16:45.14:566,45,0	1/1:3,23:26:63.20:792,63,0	1/1:1,15:16:38.79:464,39,0	0/0:13,0:12:24.05:0,24,245	0/0:30,0:30:75.16:0,75,761	0/0:14,0:14:39.09:0,39,397	1/1:5,12:17:36.12:453,36,0	0/0:14,0:14:39.08:0,39,398	0/0:9,0:9:24.05:0,24,245	0/0:21,0:21:63.14:0,63,643	0/0:19,0:19:54.12:0,54,546	0/0:35,0:35:93.20:0,93,948	0/0:16,0:16:47.78:0,48,470
chr10	39168581	.	AGT	A	3695.77	PASS	AB=0.926;AC=19;AF=0.352;AN=54;BaseQRankSum=1.476;DP=558;FS=8.328;HRun=0;HaplotypeScore=112.3045;InbreedingCoeff=0.5220;MQ=58.94;MQ0=4;MQRankSum=5.327;QD=14.38;ReadPosRankSum=1.511;VQSLOD=3.3325;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:23:3.45:0,3,27	./.	0/1:29,0:13:29.36:29,0,38	0/1:27,1:15:11.35:11,0,229	0/0:10,0:12:3:0,3,26	0/0:20,0:23:6:0,6,51	0/0:19,0:20:3:0,3,26	1/1:15,14:29:39.07:425,39,0	0/0:10,0:11:2.63:0,3,26	0/0:17,0:17:33.01:0,33,391	0/0:19,0:23:5.69:0,6,52	0/0:20,0:20:42.14:0,42,655	0/0:16,0:16:6.01:0,6,69	0/0:10,0:12:14.78:0,15,140	0/0:15,0:16:3:0,3,26	0/0:19,0:20:8.95:0,9,75	0/0:15,0:14:3.01:0,3,43	0/0:14,0:16:18.04:0,18,209	1/1:14,10:24:29.21:349,29,0	1/1:9,17:28:56.83:623,57,0	1/1:3,12:15:33.10:385,33,0	0/0:16,0:17:2.78:0,3,26	0/1:10,3:13:48.96:49,0,188	0/0:19,0:19:42.13:0,42,633	1/1:3,13:16:36.11:420,36,0	1/1:10,15:27:6.79:502,7,0	1/1:6,15:25:44.46:441,44,0	1/1:9,11:23:44.63:462,45,0
chr10	39168866	.	GTT	G	4182.72	PASS	AB=0.548;AC=31;AF=0.554;AN=56;BaseQRankSum=-3.422;DP=378;FS=0.000;HRun=13;HaplotypeScore=64.3865;InbreedingCoeff=0.8401;MQ=65.75;MQ0=1;MQRankSum=-4.076;QD=19.64;ReadPosRankSum=3.770;VQSLOD=2.9865;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,12:16:23.94:282,24,0	1/1:0,11:11:33.05:320,33,0	0/0:15,0:12:23.45:0,23,265	0/0:8,0:5:2.67:0,3,19	1/1:3,13:17:38.74:361,39,0	1/1:2,9:12:29.76:274,30,0	1/1:4,6:10:18.01:175,18,0	0/0:8,1:26:13.65:0,14,120	1/1:5,6:11:17.99:175,18,0	1/1:4,5:9:14.99:145,15,0	1/1:2,7:9:23.64:222,24,0	0/0:5,0:5:12.03:0,12,155	1/1:1,7:8:21.03:204,21,0	1/1:6,8:14:28.73:288,29,0	1/1:0,15:15:42.07:407,42,0	1/1:2,16:18:45.06:436,45,0	1/1:1,23:24:60.09:582,60,0	1/1:2,6:9:23.78:215,24,0	0/0:1,0:12:27.57:0,28,97	0/0:6,0:18:33.47:0,33,170	0/0:2,0:5:2.50:0,2,9	1/1:2,4:6:9:87,9,0	0/0:10,0:10:27.06:0,27,353	0/0:5,0:6:12.04:0,12,159	0/0:3,1:15:4.42:0,4,73	0/1:4,2:23:8.78:9,0,126	0/0:4,0:23:44.92:0,45,154	0/0:5,0:21:40.91:0,41,172
chr10	39168904	.	AT	A	2234.83	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=4.898;DP=424;FS=8.668;HRun=8;HaplotypeScore=65.3978;InbreedingCoeff=0.9240;MQ=72.54;MQ0=3;MQRankSum=-6.899;QD=18.78;ReadPosRankSum=0.816;VQSLOD=2.9687;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,16:16:44.99:422,45,0	0/0:13,0:13:24.07:0,24,287	0/0:20,0:13:22.85:0,23,204	0/1:22,0:10:0.69:1,0,96	0/0:26,0:25:57.08:0,57,647	1/1:1,9:10:30.03:282,30,0	1/1:0,6:6:17.97:162,18,0	0/0:27,0:27:57.17:0,57,679	0/0:8,0:8:18.05:0,18,208	1/1:0,12:12:33.05:318,33,0	1/1:2,17:19:45.02:424,45,0	0/0:7,0:7:21.03:0,21,229	1/1:0,10:10:30.05:289,30,0	1/1:2,13:15:36.01:338,36,0	0/0:16,0:16:45.13:0,45,532	0/0:16,0:16:39.11:0,39,461	0/0:25,0:25:57.17:0,57,688	1/1:0,8:8:21.03:202,21,0	0/0:17,0:17:42.11:0,42,480	0/0:20,0:20:49.39:0,49,580	0/0:5,0:4:9.01:0,9,96	0/0:5,0:5:9.03:0,9,109	0/0:10,0:10:21.06:0,21,254	0/0:4,0:4:12.01:0,12,130	0/0:19,0:19:48.12:0,48,565	0/0:18,1:19:22.26:0,22,551	0/0:20,0:20:54.17:0,54,652	0/0:28,0:28:84.26:0,84,1015
chr10	39169262	.	C	CTT	2219.52	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=8.458;DP=501;FS=9.976;HRun=10;HaplotypeScore=107.6009;InbreedingCoeff=0.9241;MQ=52.86;MQ0=7;MQRankSum=-5.557;QD=8.99;ReadPosRankSum=-2.390;VQSLOD=0.2877;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:26:26.15:130,26,0	1/1:7,1:6:9.84:41,10,0	0/0:15,0:5:2.52:0,3,26	0/0:15,0:6:9.37:0,9,80	1/1:26,1:27:38.96:302,39,0	1/1:13,0:12:20.13:127,20,0	1/1:18,0:18:31.19:167,31,0	0/0:39,0:39:58.23:0,58,546	1/1:12,4:15:25.93:228,26,0	1/1:28,0:29:45.64:306,46,0	1/1:11,0:12:21.26:102,21,0	0/0:14,0:14:17.96:0,18,183	1/1:12,0:12:6.74:23,7,0	1/1:9,0:9:21.76:108,22,0	1/1:15,2:15:32.66:298,33,0	1/1:10,1:11:25.56:221,26,0	1/1:10,8:17:19.69:173,20,0	1/1:19,0:18:11.96:104,12,0	0/0:36,0:35:73.85:0,74,695	0/0:21,0:21:19.20:0,19,177	0/0:10,0:10:8.98:0,9,91	1/1:11,1:9:13.41:113,13,0	0/0:14,0:14:23.05:0,23,241	0/0:27,0:27:32.92:0,33,332	0/0:14,0:14:20.99:0,21,205	0/0:14,0:13:26.99:0,27,275	0/0:19,0:19:20.98:0,21,211	0/0:15,0:15:18:0,18,183
chr10	39169272	.	TC	T	2255.24	PASS	AB=1.000;AC=31;AF=0.554;AN=56;BaseQRankSum=4.479;DP=517;FS=11.845;HRun=1;HaplotypeScore=63.7212;InbreedingCoeff=0.6954;MQ=48.74;MQ0=30;MQRankSum=-3.764;QD=7.14;ReadPosRankSum=-0.124;VQSLOD=-0.6847;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:34,0:32:40.24:258,40,0	1/1:8,0:6:6.22:16,6,0	0/0:22,0:4:7.98:0,8,50	0/0:22,0:6:9.75:0,10,86	1/1:23,3:26:9.29:231,9,0	1/1:12,1:12:26.08:178,26,0	1/1:22,0:21:38.63:245,39,0	0/1:34,0:34:38.01:38,0,213	1/1:14,0:12:14.80:119,15,0	1/1:28,1:29:60.32:466,60,0	1/1:12,0:12:23.20:147,23,0	0/0:13,0:12:3.46:0,3,157	1/1:16,0:16:15.94:86,16,0	1/1:11,0:11:24.35:147,24,0	1/1:16,0:14:21.17:113,21,0	1/1:10,0:10:3.78:63,4,0	0/1:18,0:15:2.85:42,0,3	1/1:20,1:19:28.67:212,29,0	0/0:33,0:31:14.03:0,14,308	0/0:19,0:19:2.54:0,3,42	0/0:6,0:6:8.94:0,9,62	1/1:14,0:11:18.09:94,18,0	0/0:17,0:17:35.71:0,36,301	0/0:22,0:22:26.73:0,27,352	0/0:16,0:15:10.51:0,11,76	0/1:18,0:17:3.42:3,0,166	0/0:17,0:17:16.76:0,17,119	0/0:14,0:13:18.67:0,19,140
chr10	39169275	.	T	TC	1240.73	PASS	AB=0.847;AC=17;AF=0.304;AN=56;BaseQRankSum=3.555;DP=522;FS=5.655;HRun=0;HaplotypeScore=69.3180;InbreedingCoeff=0.0921;MQ=47.71;MQ0=32;MQRankSum=-1.526;QD=4.65;ReadPosRankSum=2.066;VQSLOD=2.7283;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:13,23:34:68.67:238,0,69	0/0:8,0:6:6.77:0,7,21	0/0:22,0:4:0.67:0,1,31	0/1:21,0:5:0.31:0,0,69	0/1:29,0:28:22.15:22,0,63	0/1:14,0:13:2.24:75,0,2	0/1:20,3:22:0.60:182,0,1	0/0:33,0:33:78.56:0,79,701	0/1:16,0:13:10.02:10,0,66	0/1:11,16:28:66.54:317,0,67	1/1:2,8:11:9.92:127,10,0	0/0:14,0:13:30.01:0,30,302	0/1:4,11:16:32.14:32,0,33	1/1:9,2:11:8.43:83,8,0	1/1:15,0:13:0.95:51,1,0	0/1:10,0:10:13.58:14,0,45	0/0:18,0:15:19.89:0,20,130	0/1:9,13:20:29.35:192,0,29	0/0:33,0:31:81.95:0,82,746	0/0:19,0:19:18.20:0,18,145	0/0:6,0:6:14.99:0,15,127	0/1:15,0:12:13.31:56,0,13	0/0:17,0:17:32.26:0,32,409	0/0:21,0:21:48.10:0,48,548	0/0:15,0:14:21:0,21,186	0/0:18,0:17:44.71:0,45,397	0/0:17,0:17:26.90:0,27,224	0/0:14,0:13:26.82:0,27,223
chr10	39169286	.	TTC	T	426.98	PASS	AB=0.956;AC=17;AF=0.304;AN=56;BaseQRankSum=1.654;DP=507;FS=26.875;HRun=0;HaplotypeScore=70.4823;InbreedingCoeff=-0.4008;MQ=40.56;MQ0=40;MQRankSum=1.475;QD=1.29;ReadPosRankSum=0.041;VQSLOD=-0.5085;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:39,1:37:27.43:27,0,141	0/0:9,0:7:13.95:0,14,100	0/0:19,0:2:3.01:0,3,37	0/1:19,0:3:1.88:2,0,25	0/1:24,0:23:19.48:19,0,90	0/1:14,0:12:32.75:33,0,35	0/1:25,0:23:33.64:90,0,34	0/1:29,0:28:1.25:1,0,146	0/0:21,0:15:8.56:0,9,99	0/1:25,1:26:61.28:61,0,151	0/1:10,0:10:19.43:19,0,42	0/0:15,0:13:17.61:0,18,197	0/0:18,0:18:9.22:0,9,79	0/1:12,0:12:23.86:24,0,36	0/0:14,1:13:21.68:0,22,117	0/1:8,1:9:13.28:13,0,89	0/0:19,0:15:2.91:0,3,68	0/1:20,1:19:30.88:31,0,100	0/1:26,0:24:79.96:90,0,80	0/1:23,0:23:41.64:42,0,83	0/0:3,0:3:1.17:0,1,9	0/1:13,3:13:23.07:23,0,73	0/0:17,0:17:6.20:0,6,176	0/0:23,0:22:47.84:0,48,449	0/1:14,0:13:2.85:3,0,47	0/1:14,0:13:44.63:57,0,45	0/0:18,0:18:10.64:0,11,95	0/1:3,5:7:2.67:36,0,3
chr10	39170973	.	CA	C	509.71	PASS	AB=0.971;AC=3;AF=0.054;AN=56;BaseQRankSum=3.483;DP=489;FS=1.627;HRun=9;HaplotypeScore=67.6836;InbreedingCoeff=0.7510;MQ=78.50;MQ0=0;MQRankSum=0.255;QD=8.94;ReadPosRankSum=0.377;VQSLOD=1.9985;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:60.18:0,60,692	0/0:8,0:8:24.06:0,24,268	0/1:31,1:23:1.83:2,0,235	0/0:24,1:19:35.24:0,35,296	0/0:24,0:24:63.18:0,63,719	0/0:19,0:19:57.17:0,57,658	0/0:20,0:20:53.67:0,54,622	0/0:28,0:28:72.19:0,72,807	0/0:14,0:14:36.11:0,36,416	0/0:14,0:14:42.12:0,42,485	0/0:21,0:21:60.18:0,60,693	0/0:10,0:10:30.07:0,30,329	0/0:11,0:11:27.08:0,27,312	0/0:16,0:16:42.11:0,42,474	0/0:18,0:18:48.14:0,48,554	0/0:13,0:13:33.08:0,33,371	0/0:19,0:19:48.13:0,48,544	0/0:13,0:13:39.05:0,39,423	0/0:25,0:25:66.09:0,66,728	0/0:15,0:15:41.95:0,42,456	0/0:12,0:12:33.08:0,33,369	0/0:11,0:11:27.07:0,27,303	0/0:7,0:7:21.05:0,21,232	0/0:19,0:18:45.13:0,45,519	1/1:1,23:24:66.04:604,66,0	0/0:19,0:19:54.16:0,54,621	0/0:16,0:16:36.11:0,36,416	0/0:15,0:15:45.13:0,45,519
chr10	39171121	.	TG	T	2739.05	PASS	AB=0.651;AC=48;AF=0.857;AN=56;BaseQRankSum=-3.559;DP=436;FS=3.151;HRun=12;HaplotypeScore=59.3500;InbreedingCoeff=0.3635;MQ=81.08;MQ0=0;MQRankSum=-3.972;QD=6.95;ReadPosRankSum=3.375;VQSLOD=2.0790;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:32:26.07:77,26,0	1/1:2,5:9:16.02:105,16,0	0/0:26,0:21:17.03:0,17,137	0/0:16,0:15:10.28:0,10,115	1/1:10,1:13:10.02:58,10,0	1/1:4,0:15:18.51:55,19,0	1/1:1,0:15:24.44:71,24,0	0/1:9,5:14:16.49:60,0,16	1/1:3,8:11:14.93:116,15,0	1/1:8,0:20:22.83:66,23,0	1/1:4,1:14:17.36:59,17,0	1/1:2,7:9:14.93:116,15,0	1/1:2,0:12:12.22:35,12,0	1/1:1,0:15:24.44:71,24,0	1/1:3,12:16:31.92:238,32,0	0/1:8,7:15:9.53:118,0,10	1/1:5,13:21:32.96:226,33,0	1/1:2,1:11:22.27:93,22,0	1/1:9,5:16:8.68:127,9,0	1/1:6,8:15:16.94:120,17,0	1/1:7,11:18:23.88:183,24,0	0/1:5,11:17:10.39:102,0,10	1/1:7,3:10:8.96:70,9,0	1/1:6,15:23:15.43:283,15,0	1/1:4,5:10:7.99:52,8,0	1/1:13,5:19:16.93:122,17,0	0/1:5,9:14:7.49:122,0,7	1/1:0,9:9:17.93:139,18,0
chr10	39175343	.	T	TAC	2191.83	PASS	AB=0.965;AC=34;AF=0.654;AN=52;BaseQRankSum=2.742;DP=433;FS=4.078;HRun=0;HaplotypeScore=82.4553;InbreedingCoeff=0.0360;MQ=63.85;MQ0=6;MQRankSum=0.017;QD=6.68;ReadPosRankSum=-0.771;VQSLOD=2.9945;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:21,1:22:37.12:181,0,37	1/1:5,0:5:2.99:38,3,0	./.	./.	1/1:14,0:14:3.01:38,3,0	0/0:11,0:11:6.77:0,7,71	0/0:20,0:20:19.89:0,20,172	0/1:12,0:11:26.10:33,0,26	1/1:14,0:14:17.89:209,18,0	1/1:13,0:13:15.03:172,15,0	1/1:11,1:12:8.62:87,9,0	1/1:15,0:15:2.03:5,2,0	0/1:19,1:18:8.65:153,0,9	0/1:17,0:16:15.20:64,0,15	1/1:16,0:16:11.97:152,12,0	0/1:11,0:11:24.12:24,0,57	0/1:15,0:15:11.94:214,0,12	1/1:22,1:22:0.06:344,0,0	1/1:9,1:10:3.01:46,3,0	0/1:20,0:20:21.22:109,0,21	0/1:20,11:30:93.23:93,0,111	1/1:10,0:10:6.02:83,6,0	0/1:17,0:17:0:0,0,0	0/0:23,0:22:8.89:0,9,84	0/0:11,0:11:14.65:0,15,164	1/1:14,1:15:17.73:216,18,0	1/1:11,0:10:5.93:55,6,0	0/1:5,0:5:27.21:32,0,27
chr10	39175376	.	A	AC	756.63	PASS	AB=0.897;AC=16;AF=0.286;AN=56;BaseQRankSum=4.347;DP=434;FS=3.712;HRun=1;HaplotypeScore=81.7154;InbreedingCoeff=-0.2052;MQ=43.70;MQ0=29;MQRankSum=-5.230;QD=3.41;ReadPosRankSum=0.119;VQSLOD=0.0661;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:27:43.40:43,0,174	0/0:5,0:4:2.32:0,2,9	0/0:19,0:2:6.02:0,6,73	0/0:24,0:2:3.01:0,3,38	0/0:7,0:6:2.60:0,3,10	0/1:12,2:14:53.77:166,0,54	0/1:23,8:29:99:156,0,157	0/1:17,0:14:54.17:57,0,54	0/1:8,0:11:18:18,0,68	0/1:2,0:9:1.77:2,0,94	0/1:5,0:5:16.51:17,0,24	1/1:16,1:15:6.48:73,6,0	0/0:18,0:15:18.35:0,18,154	0/0:14,0:13:8.38:0,8,48	0/0:11,0:11:8.55:0,9,56	0/1:9,0:12:59.32:104,0,59	0/1:13,0:17:38.16:38,0,103	0/1:20,0:19:99:107,0,103	0/1:7,0:7:1.38:1,0,13	0/0:14,0:13:16.40:0,16,137	0/0:43,0:42:24.29:0,24,316	0/1:11,0:10:0.46:68,0,0	0/1:12,0:12:19.24:34,0,19	0/0:19,0:18:8.93:0,9,109	0/1:8,0:8:21.29:21,0,173	0/0:17,0:16:27.58:0,28,172	0/0:12,0:11:17.49:0,17,128	0/0:8,0:8:22.32:0,22,169
chr10	39177559	.	TG	T	12672.43	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-8.554;DP=550;FS=18.594;HRun=8;HaplotypeScore=58.1809;InbreedingCoeff=0.9246;MQ=79.62;MQ0=0;MQRankSum=-6.860;QD=24.99;ReadPosRankSum=2.882;VQSLOD=3.5584;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,24:27:66.10:637,66,0	1/1:0,7:7:21.03:203,21,0	0/0:15,0:15:2.48:0,2,274	0/0:14,0:13:35.81:0,36,429	1/1:2,23:25:66.03:620,66,0	1/1:0,19:19:48.08:463,48,0	1/1:1,11:12:27.04:261,27,0	1/1:4,33:37:96.11:913,96,0	1/1:2,20:22:45.07:434,45,0	1/1:5,26:31:81.12:779,81,0	1/1:1,20:21:57.04:540,57,0	1/1:3,13:16:36.04:341,36,0	1/1:1,11:12:27.04:261,27,0	1/1:1,10:11:30.05:290,30,0	1/1:2,14:16:42.06:406,42,0	1/1:1,12:13:36.05:348,36,0	1/1:2,10:12:30.05:290,30,0	1/1:1,17:18:48.08:464,48,0	1/1:1,25:26:75.10:714,75,0	1/1:4,33:37:96.11:917,96,0	1/1:0,15:15:36.06:348,36,0	1/1:1,23:24:72.11:694,72,0	1/1:2,19:21:54.09:521,54,0	1/1:1,8:9:21.03:203,21,0	0/0:1,0:14:37.38:0,37,190	1/1:4,27:31:84.13:811,84,0	1/1:2,29:30:87.14:840,87,0	1/1:1,13:14:39.06:377,39,0
chr10	39179290	.	AAG	A	1017.03	PASS	AB=0.956;AC=26;AF=0.481;AN=54;BaseQRankSum=3.050;DP=393;FS=4.378;HRun=0;HaplotypeScore=56.3557;InbreedingCoeff=-0.6055;MQ=37.09;MQ0=42;MQRankSum=1.298;QD=2.94;ReadPosRankSum=3.594;VQSLOD=1.1490;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:19:29.71:137,0,30	0/1:8,1:8:33.97:34,0,41	1/1:11,0:2:0.58:1,1,0	./.	0/1:24,0:22:28.04:28,0,78	0/1:11,1:10:42.98:43,0,56	0/1:15,0:13:26.33:62,0,26	0/0:20,0:19:5.46:0,5,187	0/1:7,2:9:0.58:66,0,1	0/1:14,4:17:36.62:153,0,37	0/1:18,0:17:60.88:85,0,61	0/1:11,2:11:14.92:60,0,15	0/1:7,1:8:9.44:23,0,9	0/1:14,1:12:52.45:97,0,52	0/1:10,0:9:11.94:12,0,36	0/1:12,1:13:24.73:68,0,25	0/1:17,0:10:14.39:14,0,25	1/1:17,0:9:7.55:89,8,0	0/1:13,0:13:24.09:24,0,91	0/1:18,1:18:8.82:9,0,223	0/1:9,0:7:2.16:17,0,2	0/0:9,0:6:8.84:0,9,69	0/1:11,0:10:16.04:39,0,16	0/0:5,0:4:1.90:0,2,8	0/1:11,0:11:31.03:31,0,48	0/1:17,0:15:12.30:12,0,128	0/1:13,0:13:15.58:50,0,16	0/1:21,0:14:6.20:6,0,80
chr10	39179549	.	T	TTG	2002.52	PASS	AB=0.788;AC=21;AF=0.404;AN=52;BaseQRankSum=-2.257;DP=575;FS=5.022;HRun=0;HaplotypeScore=81.4693;InbreedingCoeff=0.0685;MQ=63.76;MQ0=8;MQRankSum=0.356;QD=5.71;ReadPosRankSum=-0.949;VQSLOD=2.2834;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:23,7:31:61.24:159,0,61	0/0:2,0:3:5.85:0,6,47	./.	./.	0/0:20,0:22:21.20:0,21,191	0/1:7,6:14:17.90:165,0,18	1/1:7,9:17:21.07:314,21,0	1/1:19,0:19:5.97:46,6,0	0/0:19,0:19:29.97:0,30,329	0/1:11,8:21:19.97:280,0,20	0/1:12,2:13:26.93:39,0,27	0/0:17,0:17:11.77:0,12,110	0/1:14,4:18:24.35:80,0,24	0/1:7,1:13:23.92:62,0,24	0/0:25,0:24:23.90:0,24,245	0/0:23,0:23:27.06:0,27,288	0/1:20,0:21:43.29:43,0,201	0/1:19,11:32:99:271,0,110	0/1:17,1:22:8.92:209,0,9	0/1:10,0:19:17.94:90,0,18	1/1:24,2:41:9:79,9,0	0/0:11,0:11:14.96:0,15,132	0/0:11,0:9:9.50:0,9,99	0/0:31,0:34:53.75:0,54,527	0/0:4,0:15:25.57:0,26,126	0/1:30,1:31:23.47:59,0,23	1/1:15,2:19:12.01:139,12,0	1/1:11,2:16:12.02:142,12,0
chr10	39180245	.	G	GT	4608.72	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-14.186;DP=606;FS=7.916;HRun=7;HaplotypeScore=57.3797;InbreedingCoeff=0.9987;MQ=81.62;MQ0=0;MQRankSum=-3.065;QD=28.99;ReadPosRankSum=-1.100;VQSLOD=4.9110;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,102,985	0/0:8,0:8:21.03:0,21,203	0/0:18,0:18:38.22:0,38,383	0/0:14,0:14:35.52:0,36,319	0/0:26,0:26:69.07:0,69,653	0/0:25,0:24:69.07:0,69,654	0/0:25,0:25:75.09:0,75,713	1/1:3,25:28:69.19:810,69,0	0/0:23,0:24:65.12:0,65,608	0/0:19,0:19:54.07:0,54,514	0/0:17,0:17:48.08:0,48,463	0/0:17,0:17:48.06:0,48,457	0/0:21,0:21:60.07:0,60,572	0/0:26,0:26:63.09:0,63,608	0/0:26,0:26:72.09:0,72,684	0/0:21,0:21:60.09:0,60,579	0/0:27,0:27:63.09:0,63,608	0/0:21,0:21:63.05:0,63,598	1/1:3,17:21:54.06:585,54,0	1/1:4,23:27:66.15:780,66,0	1/1:4,21:25:48.15:580,48,0	0/0:20,0:20:56.58:0,57,531	0/0:24,0:24:71.91:0,72,679	0/0:22,0:22:57.04:0,57,541	0/0:10,0:10:24.04:0,24,232	1/1:2,18:20:28.20:623,28,0	1/1:2,21:23:66.03:759,66,0	1/1:0,14:14:39.12:471,39,0
chr10	39180707	.	C	CA	2609.82	PASS	AB=0.761;AC=24;AF=0.429;AN=56;BaseQRankSum=-3.034;DP=584;FS=5.041;HRun=13;HaplotypeScore=79.4922;InbreedingCoeff=0.2625;MQ=66.71;MQ0=12;MQRankSum=0.995;QD=8.18;ReadPosRankSum=0.409;VQSLOD=2.8719;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:45.63:0,46,410	0/1:4,7:11:2.55:121,0,3	0/1:39,0:17:18.59:19,0,55	0/0:44,1:13:6.99:0,7,30	1/1:10,19:30:3.87:366,4,0	0/0:25,2:28:16.83:0,17,386	0/0:18,0:18:21.44:0,21,250	0/0:33,0:34:58.74:0,59,373	1/1:3,9:12:0.49:147,0,0	0/0:18,0:19:21.41:0,21,255	0/1:9,1:11:3:3,0,109	1/1:3,12:15:24.03:223,24,0	0/1:3,8:11:24.86:46,0,25	1/1:3,11:14:27.03:251,27,0	1/1:3,14:17:10.37:231,10,0	1/1:6,10:16:17.86:153,18,0	0/1:7,12:20:20.05:236,0,20	0/1:9,2:11:10.79:11,0,84	0/1:21,1:21:5.73:6,0,160	0/1:19,3:27:66.67:67,0,215	0/0:7,0:7:14.84:0,15,103	1/1:5,19:24:54.01:491,54,0	0/1:5,14:20:14.37:276,0,14	0/1:6,10:16:2.06:145,0,2	0/0:13,1:17:13.95:0,14,216	0/0:25,0:26:44.79:0,45,310	0/0:23,1:25:27.62:0,28,327	0/0:10,1:11:1.92:0,2,157
chr10	39181428	.	G	GA	5259.28	PASS	AB=0.519;AC=29;AF=0.518;AN=56;BaseQRankSum=-10.948;DP=580;FS=1.229;HRun=7;HaplotypeScore=88.2608;InbreedingCoeff=0.9454;MQ=77.55;MQ0=0;MQRankSum=2.061;QD=19.19;ReadPosRankSum=-3.144;VQSLOD=3.8186;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,26:29:42.08:490,42,0	0/0:10,0:10:26.62:0,27,181	0/0:37,0:25:43.74:0,44,335	0/0:27,0:17:23.29:0,23,229	0/0:24,0:24:55.02:0,55,343	1/1:4,16:20:36.11:435,36,0	1/1:1,13:14:24.07:289,24,0	1/1:3,13:16:16.97:341,17,0	0/0:22,0:23:55.60:0,56,346	1/1:1,11:12:27.05:309,27,0	0/1:1,12:14:2.08:195,0,2	0/0:26,0:26:59.01:0,59,385	1/1:9,7:16:32.89:381,33,0	1/1:1,13:14:18.06:217,18,0	0/0:25,0:25:64.61:0,65,421	0/0:17,0:17:41.22:0,41,265	0/0:31,0:31:70.70:0,71,450	1/1:3,18:21:39.10:458,39,0	1/1:5,20:25:58.23:568,58,0	1/1:5,12:17:26.88:245,27,0	1/1:3,8:11:11.95:125,12,0	0/0:10,0:10:23.56:0,24,153	0/0:23,0:24:58.33:0,58,377	0/0:32,0:32:67.39:0,67,437	0/0:20,0:20:48:0,48,442	1/1:6,23:29:59.97:606,60,0	1/1:4,20:24:37.05:436,37,0	1/1:4,8:12:15:164,15,0
chr10	39181435	.	AG	A	3959.19	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-10.511;DP=588;FS=6.747;HRun=10;HaplotypeScore=89.4360;InbreedingCoeff=0.9758;MQ=75.37;MQ0=0;MQRankSum=-0.631;QD=18.16;ReadPosRankSum=6.178;VQSLOD=3.7801;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:50.48:0,50,366	1/1:3,8:11:20.78:169,21,0	0/0:35,0:24:17.63:0,18,295	0/0:26,0:16:13.35:0,13,155	1/1:4,17:21:53.87:452,54,0	0/0:18,0:18:41.53:0,42,313	0/0:16,0:16:32.78:0,33,244	0/0:21,0:22:21.54:0,22,182	1/1:6,17:23:62.01:531,62,0	0/0:15,0:15:32.76:0,33,249	0/0:15,0:15:20.85:0,21,160	1/1:4,20:24:47.98:416,48,0	0/0:18,0:18:42.63:0,43,325	0/0:16,0:16:6.31:0,6,157	1/1:6,22:28:50.98:442,51,0	1/1:3,12:15:28.49:302,28,0	1/1:3,28:31:65.97:572,66,0	0/0:20,0:20:37.22:0,37,280	0/0:21,0:21:46.81:0,47,348	0/0:14,0:15:20.92:0,21,178	0/0:13,0:14:23.74:0,24,176	1/1:2,10:12:20.95:175,21,0	1/1:7,19:26:43.80:380,44,0	1/1:6,21:27:59.97:520,60,0	0/0:21,0:21:42.09:0,42,446	0/0:31,0:31:71.61:0,72,566	0/0:23,0:23:43.41:0,43,293	0/0:11,0:11:17.85:0,18,128
chr10	39181983	.	A	AGGATGGAT	9297.99	PASS	AB=1.000;AC=34;AF=0.654;AN=52;BaseQRankSum=0.312;DP=751;FS=7.387;HRun=0;HaplotypeScore=199.8968;InbreedingCoeff=0.8406;MQ=67.67;MQ0=8;MQRankSum=-7.803;QD=17.41;ReadPosRankSum=-3.641;VQSLOD=2.7154;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:52,0:52:1.70:2,0,952	./.	./.	0/1:43,0:29:0:0,0,0	1/1:16,11:30:14.77:510,15,0	0/0:20,0:20:39.12:0,39,831	0/0:31,0:31:48.62:0,49,1048	1/1:35,0:35:51.14:1016,51,0	1/1:16,10:26:34:1251,34,0	0/0:25,0:25:39.10:0,39,767	0/0:12,0:12:15.05:0,15,370	1/1:19,0:38:41.90:342,42,0	0/0:22,0:22:30.09:0,30,685	0/0:32,0:32:42.14:0,42,1005	1/1:20,10:31:33.11:1262,33,0	1/1:11,5:18:21.07:694,21,0	1/1:28,5:36:12.04:423,12,0	0/0:22,0:22:39.10:0,39,897	1/1:22,3:25:12.04:489,12,0	1/1:13,9:22:18.06:646,18,0	1/1:32,7:43:3.01:71,3,0	1/1:11,6:21:12.02:390,12,0	1/1:8,0:20:11.98:100,12,0	1/1:16,0:36:44.89:366,45,0	0/0:26,0:26:42.14:0,42,994	1/1:21,5:28:24.08:773,24,0	1/1:11,7:19:21.07:854,21,0	1/1:9,0:9:3.01:110,3,0
chr10	39182316	.	GA	G	883.92	PASS	AB=0.896;AC=18;AF=0.321;AN=56;BaseQRankSum=6.047;DP=454;FS=34.500;HRun=13;HaplotypeScore=61.1739;InbreedingCoeff=0.6160;MQ=48.07;MQ0=38;MQRankSum=-2.312;QD=4.88;ReadPosRankSum=3.102;VQSLOD=-0.0285;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:26,2:29:34.68:221,35,0	0/0:2,0:2:5.93:0,6,46	0/0:16,1:3:2.80:0,3,13	0/0:17,2:4:7.52:0,8,37	0/0:16,1:17:13.97:0,14,259	1/1:8,5:11:22.51:142,23,0	1/1:9,1:11:17.20:99,17,0	0/0:31,1:32:27.04:0,27,452	0/1:11,0:9:8.28:8,0,61	1/1:12,5:16:13.28:174,13,0	1/1:7,1:8:8.16:58,8,0	0/0:15,0:15:22.93:0,23,183	1/1:8,3:12:19.19:104,19,0	0/1:6,2:9:8.08:71,0,8	0/0:13,1:12:7.49:0,7,155	0/0:18,0:17:21.02:0,21,197	0/1:33,1:34:0.58:1,0,357	1/1:23,1:20:29.85:189,30,0	0/0:12,0:11:17.98:0,18,156	0/0:20,1:20:17.15:0,17,267	0/0:16,1:18:4.45:0,4,226	0/0:15,0:14:20.05:0,20,200	0/0:11,0:12:23.69:0,24,205	0/0:16,4:18:7.93:0,8,222	0/0:3,0:13:8.64:0,9,47	0/1:9,1:8:3.81:4,0,118	0/0:13,0:13:17.85:0,18,154	0/0:6,0:3:9:0,9,82
chr10	39182331	.	G	GA	1964.21	PASS	AB=0.927;AC=17;AF=0.304;AN=56;BaseQRankSum=3.621;DP=555;FS=1.493;HRun=11;HaplotypeScore=68.5495;InbreedingCoeff=0.8035;MQ=58.22;MQ0=30;MQRankSum=-0.380;QD=10.68;ReadPosRankSum=0.314;VQSLOD=3.0237;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:32,1:33:62.65:548,63,0	0/0:4,0:5:13.99:0,14,99	0/0:29,0:12:16.59:0,17,110	0/0:25,0:8:9.22:0,9,89	0/0:20,2:22:17.38:0,17,312	1/1:13,0:12:0.73:155,1,0	1/1:16,2:17:35.96:328,36,0	0/1:34,3:36:27.23:27,0,342	0/0:18,0:17:32.82:0,33,254	1/1:20,2:21:27.41:251,27,0	1/1:5,8:13:0.30:158,0,0	0/0:17,0:17:16.56:0,17,120	1/1:10,0:10:17.96:154,18,0	1/1:9,1:11:17.29:130,17,0	0/0:21,0:18:29.72:0,30,222	0/0:19,0:19:25.32:0,25,190	0/0:33,0:34:69.76:0,70,522	1/1:24,2:24:28.56:406,29,0	0/0:11,0:11:14.91:0,15,113	0/0:25,1:24:14.24:0,14,285	0/0:19,0:19:32.61:0,33,242	0/0:20,0:18:35.77:0,36,271	0/0:15,0:15:25.79:0,26,192	0/0:26,0:24:29.18:0,29,283	0/0:17,0:17:20.05:0,20,143	0/0:16,0:16:31.85:0,32,238	0/0:18,0:16:31.86:0,32,231	0/0:12,0:10:29.89:0,30,232
chr10	39183722	.	GGTGT	G	2033.33	PASS	AB=0.815;AC=34;AF=0.630;AN=54;BaseQRankSum=2.157;DP=591;FS=10.482;HRun=0;HaplotypeScore=126.3982;InbreedingCoeff=0.5532;MQ=63.90;MQ0=14;MQRankSum=1.840;QD=5.47;ReadPosRankSum=2.781;VQSLOD=2.0149;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:32,0:31:19.47:123,19,0	1/1:8,0:7:6.02:72,6,0	./.	0/0:27,0:20:2.98:0,3,21	0/1:7,9:16:0:0,0,0	1/1:10,0:12:3.47:28,3,0	0/1:22,0:22:5.89:24,0,6	0/0:28,0:26:12:0,12,156	1/1:16,2:21:24.06:322,24,0	1/1:18,0:18:14.56:105,15,0	1/1:11,0:12:16.18:91,16,0	1/1:15,8:22:11.71:170,12,0	1/1:8,0:9:8.46:45,8,0	1/1:11,0:12:1.91:35,2,0	1/1:16,0:16:25.30:343,25,0	1/1:12,15:27:24.57:342,25,0	1/1:17,16:33:6.35:208,6,0	1/1:19,0:20:9.26:132,9,0	0/0:18,0:17:8.39:0,8,114	0/1:23,0:22:17.50:18,0,228	0/0:47,0:47:42.04:0,42,692	1/1:14,10:23:3.48:49,3,0	0/1:7,11:18:0:0,0,0	1/1:10,13:22:6.02:95,6,0	0/0:18,0:18:0.94:0,1,2	0/0:30,0:29:15.44:0,15,343	0/0:21,0:21:27.36:0,27,357	0/0:6,0:6:3.01:0,3,65
chr10	39183761	.	CTG	C	3100.17	PASS	AB=0.973;AC=24;AF=0.429;AN=56;BaseQRankSum=3.589;DP=619;FS=0.449;HRun=0;HaplotypeScore=130.9706;InbreedingCoeff=0.3040;MQ=54.15;MQ0=23;MQRankSum=-2.061;QD=8.25;ReadPosRankSum=-1.675;VQSLOD=3.2453;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:37,2:39:50.59:551,51,0	0/0:9,0:9:14.96:0,15,179	0/0:16,0:6:3.79:0,4,51	0/0:32,0:7:4.30:0,4,44	0/1:21,0:21:87.71:88,0,235	1/1:8,3:11:14.30:146,14,0	1/1:25,3:27:53.18:572,53,0	0/0:29,0:28:47.16:0,47,651	1/1:16,5:21:32.77:339,33,0	1/1:24,2:25:38.83:408,39,0	0/1:10,1:11:31.34:86,0,31	0/0:25,0:24:12.68:0,13,471	1/1:13,3:16:30.05:309,30,0	1/1:13,2:16:31.94:323,32,0	0/1:20,0:20:10.87:11,0,239	0/0:27,0:25:38.94:0,39,375	0/1:42,0:42:64.24:64,0,671	0/1:16,3:18:6.04:255,0,6	0/0:11,0:11:18.31:0,18,234	0/0:19,0:17:10.26:0,10,120	0/0:48,0:44:55.52:0,56,748	0/1:17,0:17:16.03:16,0,163	0/0:21,0:21:12.03:0,12,161	0/1:34,0:33:40.75:41,0,462	0/1:16,0:15:0.05:0,0,0	0/1:20,0:19:3.45:3,0,310	0/1:17,1:17:77.47:77,0,200	0/0:6,0:6:15.05:0,15,210
chr10	39183805	.	ACG	A	11225.88	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=9.419;DP=577;FS=2.761;HRun=0;HaplotypeScore=95.8287;InbreedingCoeff=0.9993;MQ=76.63;MQ0=3;MQRankSum=-3.561;QD=37.17;ReadPosRankSum=-0.105;VQSLOD=6.7605;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,38:40:96.32:1376,96,0	0/0:11,0:11:30.10:0,30,533	0/0:30,0:26:60.18:0,60,977	0/0:31,0:27:25.10:0,25,915	0/0:19,0:19:54.01:0,54,947	1/1:0,11:11:33.11:473,33,0	1/1:3,23:26:69.23:989,69,0	1/1:2,19:19:51.17:729,51,0	0/0:22,0:22:60.21:0,60,1081	1/1:2,21:23:63.19:881,63,0	1/1:0,9:9:27.09:386,27,0	0/0:23,0:23:63.22:0,63,1144	1/1:1,15:16:48.16:686,48,0	1/1:3,22:25:57.19:817,57,0	0/0:17,0:17:48.16:0,48,867	0/0:20,0:20:45.14:0,45,794	0/0:40,0:40:99:0,111,1954	1/1:1,18:19:54.18:773,54,0	1/1:2,12:14:36.12:512,36,0	1/1:0,13:13:36.12:516,36,0	1/1:3,31:34:78.26:1117,78,0	0/0:12,0:12:29.94:0,30,549	0/0:13,0:13:39.13:0,39,714	0/0:27,0:27:78.27:0,78,1428	0/0:9,0:9:27.09:0,27,494	1/1:1,18:19:57.19:815,57,0	1/1:2,16:18:45.15:643,45,0	1/1:0,13:13:36.12:515,36,0
chr10	39184351	.	CGT	C	1353.01	PASS	AB=0.943;AC=21;AF=0.375;AN=56;BaseQRankSum=3.513;DP=692;FS=31.798;HRun=0;HaplotypeScore=140.5378;InbreedingCoeff=0.2538;MQ=60.99;MQ0=34;MQRankSum=-2.598;QD=3.51;ReadPosRankSum=-2.742;VQSLOD=1.0285;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:34,6:34:9.29:163,9,0	0/0:9,1:10:7.75:0,8,126	0/0:28,0:13:3.01:0,3,43	0/0:33,0:18:7.83:0,8,75	0/1:26,0:26:38.61:39,0,153	0/1:13,0:13:3.82:29,0,4	1/1:13,12:21:16.97:263,17,0	0/0:36,0:36:33.31:0,33,152	0/0:17,0:16:15.83:0,16,218	1/1:37,0:29:30.03:311,30,0	0/0:23,0:23:5.09:0,5,20	0/1:23,0:22:11.69:12,0,131	1/1:24,0:23:9.66:110,10,0	0/0:18,0:17:2.50:0,2,9	0/1:22,2:24:56.75:57,0,111	0/1:22,0:19:0.85:48,0,1	0/1:26,3:27:67.16:67,0,353	0/1:8,9:11:13.54:59,0,14	0/0:13,0:12:8.26:0,8,47	0/1:31,0:31:7.72:19,0,8	0/0:27,0:27:9.31:0,9,37	0/0:31,0:31:12.91:0,13,154	0/0:22,0:22:15.04:0,15,196	0/0:33,1:33:48.11:0,48,648	1/1:10,5:14:18.03:193,18,0	0/1:28,0:27:29.54:30,0,70	1/1:31,1:31:20.12:135,20,0	0/0:14,0:14:1.16:0,1,52
chr10	39184376	.	GTGTGTGTCTGTCTGTCTGTCTGTC	G	5193.75	PASS	AB=0.913;AC=20;AF=0.357;AN=56;BaseQRankSum=2.744;DP=703;FS=5.290;HRun=0;HaplotypeScore=305.4814;InbreedingCoeff=0.6024;MQ=48.64;MQ0=43;MQRankSum=-1.237;QD=16.81;ReadPosRankSum=0.456;VQSLOD=3.0471;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:37:55.74:0,56,1567	0/0:11,0:11:11.88:0,12,212	0/0:10,0:2:6.01:0,6,63	0/0:20,0:7:17.91:0,18,159	0/0:27,0:27:23.30:0,23,166	0/0:20,0:20:8.82:0,9,156	0/0:30,0:25:26.54:0,27,585	1/1:28,0:25:29.61:395,30,0	0/0:23,0:22:17.81:0,18,149	0/0:43,0:34:73.35:0,73,1622	1/1:24,0:24:5.74:48,6,0	0/1:26,0:26:33.39:33,0,142	0/0:26,0:25:19.11:0,19,701	1/1:14,0:13:3:25,3,0	0/0:25,0:25:20.07:0,20,303	0/1:25,0:22:3.44:64,0,3	0/1:26,0:24:52.05:52,0,367	0/0:18,0:12:12.01:0,12,602	1/1:19,0:17:9.67:566,10,0	1/1:3,27:30:11.90:427,12,0	1/1:30,0:28:20.93:188,21,0	0/0:25,0:25:17.99:0,18,173	0/0:22,0:22:18.01:0,18,295	0/0:34,0:33:15.71:0,16,763	0/0:13,0:12:19.32:0,19,446	1/1:5,34:38:86.27:1934,86,0	1/1:9,23:31:7.39:1177,7,0	0/1:7,8:15:22.30:283,0,22
chr10	39184378	.	GTGTGTCTGTC	G	5436.62	PASS	AB=0.938;AC=25;AF=0.446;AN=56;BaseQRankSum=3.284;DP=700;FS=68.953;HRun=0;HaplotypeScore=204.6597;InbreedingCoeff=-0.1002;MQ=48.82;MQ0=42;MQRankSum=0.668;QD=10.20;ReadPosRankSum=1.257;VQSLOD=1.2823;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:44,0:35:99:551,0,103	0/1:11,0:11:43.40:43,0,139	0/0:8,0:2:3.01:0,3,43	0/0:20,0:7:7.42:0,7,74	0/1:27,0:27:38.60:39,0,153	0/1:2,18:20:4.10:29,0,4	1/1:33,0:28:40.84:703,41,0	0/0:27,0:24:15.97:0,16,145	0/1:24,0:23:39.29:39,0,198	1/1:14,30:34:65.91:944,66,0	0/0:5,19:24:5.09:0,5,20	0/1:27,0:27:99:228,0,124	1/1:4,22:25:16.39:320,16,0	0/0:3,11:13:2.50:0,2,9	0/1:26,0:26:99:218,0,105	0/1:7,0:22:0.82:103,0,1	0/1:26,0:24:99:166,0,300	0/1:19,0:13:18.02:209,0,18	0/1:18,0:16:23.50:132,0,24	0/1:29,0:29:7.38:130,0,7	0/0:28,0:26:9.21:0,9,37	0/0:23,0:23:12.91:0,13,155	0/0:12,0:22:14.32:0,14,117	0/1:34,0:33:99:163,0,422	1/1:12,1:12:24.07:351,24,0	0/1:39,0:38:47.94:464,0,48	1/1:32,0:31:26.72:514,27,0	0/1:15,0:15:75.02:88,0,75
chr10	39184380	.	GTGTCTGTCTGTCTGTC	G	5290.87	PASS	AB=0.833;AC=30;AF=0.600;AN=50;BaseQRankSum=0.427;DP=688;FS=0.000;HRun=0;HaplotypeScore=241.9496;InbreedingCoeff=0.4502;MQ=48.63;MQ0=44;MQRankSum=-1.261;QD=11.55;ReadPosRankSum=2.805;VQSLOD=2.9124;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:34:27.61:0,28,567	0/1:7,4:11:24.75:126,0,25	./.	./.	0/1:11,16:27:0:0,0,0	0/0:20,0:20:5.70:0,6,66	0/1:31,0:30:29.64:30,0,116	1/1:27,0:22:3.01:58,3,0	1/1:9,15:23:2.52:131,3,0	0/0:40,0:34:43.10:0,43,423	0/0:23,0:23:0:0,0,0	1/1:8,19:26:11.99:514,12,0	0/0:24,0:25:18.18:0,18,213	./.	1/1:10,15:25:8.69:394,9,0	1/1:22,0:22:3.01:120,3,0	1/1:27,0:25:17.82:413,18,0	0/0:20,0:15:2.05:0,2,185	1/1:17,0:15:10.38:368,10,0	1/1:28,0:28:6.02:224,6,0	0/1:28,0:26:0:0,0,0	0/1:9,12:21:0:0,0,0	1/1:18,1:19:9.03:172,9,0	1/1:33,0:32:27.05:701,27,0	0/0:12,0:11:9.58:0,10,144	1/1:38,0:37:44.36:1045,44,0	1/1:31,0:30:23.73:814,24,0	0/1:15,0:15:9.01:180,0,9
chr10	39184382	.	GTCTGTCTGTCTGTCTGTC	G	4687.05	PASS	AB=0.984;AC=18;AF=0.321;AN=56;BaseQRankSum=4.903;DP=669;FS=23.551;HRun=0;HaplotypeScore=247.6903;InbreedingCoeff=-0.3561;MQ=48.61;MQ0=44;MQRankSum=-1.348;QD=11.52;ReadPosRankSum=2.340;VQSLOD=2.4449;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:33:22.30:0,22,951	0/1:11,0:11:59.94:60,0,139	0/0:8,0:1:3.01:0,3,34	0/1:18,0:5:9.98:10,0,27	0/0:25,0:25:1.79:0,2,122	0/0:20,0:20:9.30:0,9,133	0/1:35,0:30:9.43:9,0,428	0/1:26,0:21:37.82:38,0,320	0/1:24,0:23:56.32:56,0,151	0/0:43,0:33:15.80:0,16,837	0/0:23,0:23:6.49:0,6,65	0/1:27,0:26:99:338,0,102	0/0:26,0:25:19.21:0,19,353	0/0:13,0:12:3.01:0,3,32	0/1:24,0:24:99:219,0,120	0/1:25,0:22:23.39:142,0,23	0/1:28,0:26:99:298,0,191	0/0:21,0:15:28.34:0,28,349	0/1:10,5:14:13.48:471,0,13	0/1:28,0:28:8.86:258,0,9	0/0:24,0:22:11.71:0,12,110	0/1:21,0:21:10.85:11,0,79	0/0:17,0:17:0.24:0,0,34	0/1:30,0:29:99:262,0,287	0/1:11,0:10:19.60:20,0,215	0/1:38,0:37:99:1371,0,118	1/1:31,0:30:25.81:921,26,0	0/1:15,0:15:9.67:202,0,10
chr10	39184394	.	GTC	G	525.49	PASS	AB=1.000;AC=15;AF=0.278;AN=54;BaseQRankSum=8.498;DP=630;FS=7.027;HRun=0;HaplotypeScore=168.4261;InbreedingCoeff=0.0419;MQ=48.59;MQ0=46;MQRankSum=-4.342;QD=1.79;ReadPosRankSum=5.090;VQSLOD=1.8806;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:32:47.56:0,48,444	0/0:10,0:10:0.04:0,0,126	./.	0/0:10,0:2:5.99:0,6,50	0/0:20,0:20:5.98:0,6,48	0/0:21,0:21:11.84:0,12,169	0/0:36,0:33:81.25:0,81,779	0/1:27,0:22:17.55:18,0,287	0/1:21,0:20:2.56:3,0,56	0/0:42,0:35:73.97:0,74,723	0/0:22,0:22:9.03:0,9,128	0/1:23,0:23:29.59:35,0,30	0/0:28,0:27:23.38:0,23,238	0/0:10,0:10:6.02:0,6,86	0/1:22,0:22:14.06:14,0,151	0/1:22,0:19:9.67:10,0,37	0/1:25,0:23:99:104,0,269	0/0:23,0:17:37.71:0,38,398	0/1:12,0:11:53.94:54,0,164	1/1:28,0:28:5.68:27,6,0	0/0:12,10:20:3.01:0,3,41	0/0:16,0:16:3.01:0,3,43	0/0:16,0:16:9.03:0,9,128	0/1:35,0:34:77.80:78,0,471	0/0:11,0:10:22.21:0,22,234	0/1:36,0:35:99:165,0,129	1/1:30,0:29:21.69:113,22,0	1/1:10,2:12:9.28:61,9,0
chr10	39185008	.	CTAGATA	C	9354.12	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=6.317;DP=572;FS=0.000;HRun=0;HaplotypeScore=154.9581;InbreedingCoeff=0.6867;MQ=60.63;MQ0=5;MQRankSum=-7.332;QD=18.41;ReadPosRankSum=-1.901;VQSLOD=4.1094;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,25:39:23.73:458,24,0	1/1:4,2:6:6.02:125,6,0	0/0:18,0:13:5.34:0,5,22	0/0:20,0:11:4.37:0,4,48	1/1:10,18:28:20.83:309,21,0	1/1:8,9:17:18.06:376,18,0	1/1:6,7:13:14.97:228,15,0	1/1:24,0:38:22.53:182,23,0	1/1:14,8:22:24.08:501,24,0	1/1:14,17:31:51.16:1022,51,0	1/1:6,16:22:27.09:563,27,0	1/1:5,12:17:27.05:521,27,0	1/1:6,13:19:21.07:438,21,0	1/1:8,16:24:36.08:708,36,0	1/1:8,8:16:18.02:333,18,0	1/1:9,10:19:18.06:376,18,0	1/1:13,10:23:15.01:270,15,0	1/1:4,7:11:6.02:125,6,0	1/1:10,0:19:18.06:251,18,0	1/1:8,0:27:36.12:499,36,0	1/1:12,0:12:2.60:10,3,0	1/1:4,8:12:17.98:290,18,0	1/1:15,15:30:30.10:626,30,0	1/1:3,3:6:3.01:63,3,0	0/0:26,0:26:69.20:0,69,2103	1/1:9,0:28:38.99:537,39,0	1/1:2,0:21:33.11:461,33,0	1/1:3,0:5:6.02:84,6,0
chr10	39185932	.	TTCTC	T	1830.72	PASS	AB=0.775;AC=40;AF=0.870;AN=46;BaseQRankSum=0.708;DP=338;FS=5.600;HRun=0;HaplotypeScore=85.0932;InbreedingCoeff=0.3486;MQ=53.98;MQ0=6;MQRankSum=-0.523;QD=7.76;ReadPosRankSum=1.847;VQSLOD=1.8378;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:22,3:26:15.05:223,15,0	1/1:1,0:2:1.25:3,1,0	./.	./.	./.	1/1:6,5:11:9.03:124,9,0	1/1:8,3:11:9.03:123,9,0	0/0:31,0:29:1.25:0,1,3	1/1:7,0:12:12:106,12,0	1/1:13,1:14:15.03:171,15,0	1/1:9,5:14:5.69:192,6,0	1/1:6,0:8:7.25:58,7,0	0/0:6,0:6:1.21:0,1,7	1/1:11,1:12:6.01:72,6,0	1/1:5,0:7:6.47:54,6,0	1/1:4,0:7:9.01:84,9,0	1/1:13,0:15:9.01:84,9,0	1/1:5,1:6:12.03:161,12,0	1/1:18,0:21:9.48:85,9,0	0/1:6,0:9:0:0,0,0	0/1:6,0:8:0:0,0,0	1/1:3,0:5:2.94:18,3,0	./.	./.	1/1:5,0:5:3:25,3,0	1/1:15,0:17:14.05:132,14,0	1/1:8,0:9:18.02:172,18,0	1/1:7,0:9:3:26,3,0
chr10	39185996	.	GGTGTGTGTGTGTGTGT	G	881.10	PASS	AB=0.969;AC=12;AF=0.375;AN=32;BaseQRankSum=3.534;DP=413;FS=25.592;HRun=0;HaplotypeScore=145.3311;InbreedingCoeff=0.2872;MQ=39.35;MQ0=42;MQRankSum=-2.491;QD=8.23;ReadPosRankSum=-0.927;VQSLOD=1.1107;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:30,4:27:3.85:22,4,0	1/1:4,0:3:3.01:125,3,0	./.	./.	0/0:17,0:17:0:0,0,0	0/0:8,0:8:3.01:0,3,179	0/0:13,0:8:3.01:0,3,60	0/0:14,0:13:3.01:0,3,32	1/1:10,2:12:5.75:246,6,0	0/0:17,0:16:0:0,0,0	./.	1/1:8,1:10:6.02:241,6,0	./.	./.	./.	1/1:10,0:10:3.01:112,3,0	0/0:22,1:20:0.47:0,0,1	./.	./.	./.	0/1:20,0:18:37.83:88,0,38	./.	./.	./.	0/0:8,0:7:6.02:0,6,163	0/1:14,1:13:3.31:153,0,3	0/0:10,0:9:3.01:0,3,35	0/0:5,0:5:9.03:0,9,200
chr10	39186516	.	C	CA	77.81	PASS	AB=0.857;AC=3;AF=0.054;AN=56;BaseQRankSum=2.577;DP=616;FS=1.312;HRun=0;HaplotypeScore=59.4156;InbreedingCoeff=0.4467;MQ=58.92;MQ0=29;MQRankSum=0.195;QD=1.59;ReadPosRankSum=-1.105;VQSLOD=1.8348;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,1:33:51.66:0,52,1293	0/0:8,0:8:24.08:0,24,336	1/1:19,0:3:2.94:18,3,0	0/0:28,0:5:8.76:0,9,83	0/0:15,0:15:45.14:0,45,612	0/0:23,0:23:69.22:0,69,948	0/0:21,0:20:60.20:0,60,838	0/0:26,0:26:72.23:0,72,987	0/0:21,0:21:63.20:0,63,864	0/0:18,0:18:48.16:0,48,671	0/0:18,0:17:45.14:0,45,611	0/0:20,0:20:60.20:0,60,838	0/0:14,0:14:39.13:0,39,545	0/0:15,0:15:39.13:0,39,545	0/0:32,0:32:96.30:0,96,1325	0/0:18,0:18:54.15:0,54,734	0/0:36,1:37:60.46:0,60,1381	0/0:23,0:23:54.04:0,54,865	0/0:20,0:18:54.17:0,54,739	0/0:24,0:24:72.21:0,72,981	0/0:24,0:24:72.20:0,72,969	0/0:20,0:20:60.19:0,60,822	0/0:22,0:22:63.19:0,63,863	0/1:25,5:30:99:149,0,959	0/0:14,0:14:42.14:0,42,587	0/0:32,0:32:96.32:0,96,1342	0/0:25,0:25:75.20:0,75,1005	0/0:14,0:14:42.13:0,42,570
chr10	39186603	.	TTG	T	2525.87	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=-6.372;DP=562;FS=4.411;HRun=0;HaplotypeScore=99.3280;InbreedingCoeff=0.1411;MQ=67.01;MQ0=0;MQRankSum=0.064;QD=7.84;ReadPosRankSum=-5.806;VQSLOD=1.7593;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:34,0:33:21.34:21,0,95	0/0:9,0:9:25.79:0,26,135	0/0:26,0:23:32.46:0,32,409	0/0:10,0:10:17.14:0,17,170	0/0:19,0:19:31.76:0,32,211	1/1:2,11:13:30.09:436,30,0	1/1:10,4:14:40.82:416,41,0	0/1:31,0:31:38.19:262,0,38	0/0:28,0:28:81.46:0,81,510	0/1:26,0:26:7.19:163,0,7	0/1:12,0:12:11.66:48,0,12	0/0:15,0:15:37.87:0,38,269	1/1:1,12:13:15:184,15,0	1/1:1,12:13:20.98:250,21,0	0/0:26,0:26:51.16:0,51,385	0/0:20,0:20:51.27:0,51,383	0/0:19,0:19:52.63:0,53,371	0/1:17,0:16:38.62:39,0,55	0/1:26,0:25:54.75:141,0,55	0/1:20,0:20:30.03:187,0,30	0/1:23,0:23:46.55:47,0,89	0/0:9,0:9:20.84:0,21,124	0/0:13,0:13:26.94:0,27,160	0/0:30,0:30:56.72:0,57,389	0/0:16,0:16:48.12:0,48,678	0/1:30,0:30:65.48:214,0,65	0/1:36,0:36:99:231,0,101	0/1:14,0:14:42.55:71,0,43
chr10	39186604	.	TG	T	4750.55	PASS	AB=1.000;AC=36;AF=0.643;AN=56;BaseQRankSum=-3.349;DP=562;FS=78.514;HRun=1;HaplotypeScore=85.1598;InbreedingCoeff=0.6786;MQ=66.31;MQ0=0;MQRankSum=-2.979;QD=12.15;ReadPosRankSum=-7.234;VQSLOD=0.7312;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:34,0:33:66.28:356,66,0	1/1:9,0:9:2.18:20,2,0	0/0:23,1:21:20.49:0,20,322	0/0:9,0:9:17.51:0,18,149	0/1:20,0:20:15.27:15,0,52	1/1:11,2:13:30:263,30,0	1/1:14,1:15:41.96:363,42,0	1/1:28,3:31:59.65:466,60,0	0/0:28,0:28:3.77:0,4,113	1/1:23,0:23:58.83:393,59,0	1/1:11,0:11:24.32:156,24,0	0/1:17,0:17:5.19:5,0,71	1/1:12,1:13:14.56:107,15,0	1/1:12,1:13:20.93:170,21,0	0/0:26,0:26:31.17:0,31,187	0/0:20,0:20:8.90:0,9,189	0/0:19,0:19:16.37:0,16,153	1/1:17,0:16:18.80:99,19,0	1/1:22,2:23:49.92:353,50,0	1/1:20,2:22:42.04:356,42,0	1/1:24,0:24:41.82:281,42,0	0/1:10,0:10:13.68:14,0,18	0/1:14,0:14:1.95:2,0,33	0/0:28,0:28:29.27:0,29,179	0/0:17,0:17:44.11:0,44,487	1/1:30,1:31:70.44:583,70,0	1/1:34,2:36:70.52:535,71,0	1/1:12,2:14:28.41:212,28,0
chr10	39186605	.	GT	G	2488.69	PASS	AB=0.915;AC=27;AF=0.482;AN=56;BaseQRankSum=-5.489;DP=563;FS=6.536;HRun=13;HaplotypeScore=94.2921;InbreedingCoeff=0.6249;MQ=66.22;MQ0=1;MQRankSum=-0.214;QD=9.32;ReadPosRankSum=7.569;VQSLOD=2.6458;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:33:69.02:0,69,454	1/1:0,9:9:26.85:197,27,0	0/0:21,0:20:0.28:0,0,111	0/1:8,0:9:5.84:6,0,44	1/1:1,18:19:29.73:218,30,0	0/1:15,0:15:2.57:20,0,3	0/1:14,0:14:6.62:7,0,16	0/0:29,0:29:14.12:0,14,192	1/1:8,20:28:68.51:502,69,0	0/0:24,0:24:34.08:0,34,227	0/0:11,0:11:18.62:0,19,99	1/1:6,12:18:3.54:187,4,0	1/1:13,0:13:6.93:19,7,0	1/1:13,0:13:7.99:22,8,0	1/1:5,19:26:20.85:308,21,0	1/1:7,13:21:11.57:239,12,0	0/1:5,14:19:7.99:240,0,8	0/0:17,0:16:21.05:0,21,138	0/0:25,0:24:18.57:0,19,241	0/0:21,0:21:6.07:0,6,220	0/0:26,0:26:39.53:0,40,335	1/1:1,9:10:23.85:175,24,0	1/1:3,10:14:11.47:181,11,0	1/1:3,20:27:32.66:367,33,0	0/0:18,0:18:42.03:0,42,392	0/0:32,0:32:16.28:0,16,258	0/0:36,0:36:38.26:0,38,390	0/1:11,0:11:1.84:2,0,145
chr10	39186886	.	CT	C	1131.24	PASS	AB=0.550;AC=13;AF=0.232;AN=56;BaseQRankSum=2.755;DP=404;FS=3.917;HRun=7;HaplotypeScore=76.8671;InbreedingCoeff=0.7649;MQ=54.87;MQ0=12;MQRankSum=-3.408;QD=12.43;ReadPosRankSum=-2.242;VQSLOD=2.5866;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:69.07:0,69,781	0/0:9,0:9:14.98:0,15,163	0/0:30,0:11:20.92:0,21,194	0/0:15,0:6:12.31:0,12,95	0/0:11,0:11:27.08:0,27,328	0/0:11,0:11:1.88:0,2,153	0/0:6,0:6:10.26:0,10,101	1/1:5,11:15:33.06:328,33,0	0/0:14,0:13:15.03:0,15,181	0/0:22,0:21:42.62:0,43,436	0/0:12,0:11:24.02:0,24,260	0/0:17,0:17:15.05:0,15,185	0/0:5,0:5:15.05:0,15,187	0/0:11,0:11:24.07:0,24,288	0/0:14,0:14:30.09:0,30,359	0/0:14,0:14:33.06:0,33,397	0/0:24,0:24:54.12:0,54,657	0/0:22,0:20:40.32:0,40,383	1/1:5,7:11:21.04:213,21,0	1/1:6,10:16:23.82:243,24,0	1/1:14,0:13:2.73:29,3,0	0/0:3,0:3:9.03:0,9,113	0/0:15,0:15:18.05:0,18,220	0/0:7,0:6:15.04:0,15,176	0/0:21,0:21:60.19:0,60,750	0/1:2,9:11:7.41:245,0,7	1/1:7,6:13:20.69:217,21,0	1/1:5,2:8:3:31,3,0
chr10	39186890	.	T	TTTC	1386.46	PASS	AB=1.000;AC=14;AF=0.250;AN=56;BaseQRankSum=2.741;DP=383;FS=2.675;HRun=0;HaplotypeScore=93.3639;InbreedingCoeff=0.7523;MQ=54.40;MQ0=13;MQRankSum=-3.396;QD=16.91;ReadPosRankSum=-4.056;VQSLOD=2.8460;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:32.58:0,33,907	0/0:9,0:9:15.01:0,15,218	0/0:28,0:8:20.76:0,21,224	0/0:14,0:5:14.78:0,15,100	0/0:11,0:11:27.09:0,27,446	0/0:12,0:12:15.91:0,16,246	0/1:6,0:6:20.79:21,0,86	1/1:13,0:12:33.06:360,33,0	0/0:14,0:13:14.79:0,15,248	0/0:21,0:20:44.71:0,45,558	0/0:11,0:10:23.65:0,24,290	0/0:16,0:16:14.85:0,15,247	0/0:5,0:5:15.04:0,15,176	0/0:10,0:10:24.08:0,24,323	0/0:16,0:16:35.10:0,35,497	0/0:12,0:12:32.98:0,33,500	0/0:22,0:22:57.61:0,58,892	0/0:23,0:21:24.96:0,25,537	1/1:11,0:10:24.06:284,24,0	1/1:12,0:12:27.04:268,27,0	1/1:4,9:12:6:58,6,0	0/0:3,0:3:9.03:0,9,149	0/0:15,0:15:17.83:0,18,298	0/0:7,0:6:15.05:0,15,235	0/0:22,0:22:62.95:0,63,960	0/1:12,0:12:7.42:246,0,7	1/1:11,0:10:26.96:283,27,0	1/1:4,0:3:5.95:50,6,0
chr10	39186909	.	TC	T	670.18	PASS	AB=0.765;AC=13;AF=0.250;AN=52;BaseQRankSum=3.968;DP=338;FS=4.813;HRun=1;HaplotypeScore=76.4990;InbreedingCoeff=0.7950;MQ=44.72;MQ0=15;MQRankSum=-6.086;QD=12.64;ReadPosRankSum=-2.230;VQSLOD=1.6088;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:80.94:0,81,1034	0/0:10,0:10:17.98:0,18,184	./.	./.	0/0:14,0:14:32.50:0,32,324	0/0:15,0:15:13.27:0,13,199	0/0:5,0:5:11.58:0,12,66	1/1:8,0:4:7.21:45,7,0	0/0:12,0:11:10.81:0,11,95	0/0:20,0:19:47.34:0,47,511	0/0:9,0:8:20.99:0,21,227	0/0:14,0:14:7.92:0,8,65	0/0:7,0:7:9.97:0,10,105	0/0:9,0:9:10.12:0,10,128	0/0:14,1:15:31.55:0,32,271	0/0:9,0:9:25.36:0,25,220	0/0:23,0:23:44.98:0,45,467	0/0:21,0:19:50.64:0,51,591	1/1:1,5:5:12.03:152,12,0	1/1:5,4:9:15.04:184,15,0	1/1:3,2:4:9.03:106,9,0	0/0:4,0:3:8.94:0,9,67	0/0:13,0:13:13.27:0,13,160	0/0:8,0:6:11.67:0,12,142	0/0:22,0:22:60.09:0,60,880	0/1:9,4:12:2.81:188,0,3	1/1:8,1:7:11.07:116,11,0	1/1:3,0:2:5.99:48,6,0
chr10	39186914	.	CTTTCTTTCTTTCTTTTT	C	1095.50	PASS	AB=1.000;AC=13;AF=0.241;AN=54;BaseQRankSum=5.892;DP=352;FS=0.000;HRun=0;HaplotypeScore=159.9236;InbreedingCoeff=0.2816;MQ=43.46;MQ0=15;MQRankSum=-4.234;QD=11.91;ReadPosRankSum=-1.748;VQSLOD=2.4368;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:25:72:0,72,1546	0/0:10,0:10:13.66:0,14,331	./.	0/0:11,0:3:3.01:0,3,44	0/0:16,0:15:35.78:0,36,559	1/1:13,4:17:29.79:810,30,0	1/1:5,0:5:10:103,10,0	0/0:13,0:9:14.71:0,15,177	0/0:13,0:12:12.51:0,13,222	0/0:21,0:20:48.01:0,48,1148	0/0:8,0:7:18.05:0,18,393	0/0:15,0:15:9.43:0,9,219	0/1:6,0:6:10.17:10,0,53	0/1:7,0:7:9.34:9,0,59	0/0:15,0:15:34.66:0,35,971	0/0:9,0:9:26.84:0,27,512	0/0:22,0:21:44.61:0,45,942	0/0:21,0:19:51.09:0,51,1220	0/1:10,0:9:12.46:12,0,151	0/1:13,0:13:79.37:79,0,148	0/1:6,0:5:8.21:8,0,38	0/0:4,0:3:9:0,9,82	0/0:13,0:13:6.95:0,7,145	0/0:8,0:6:12.84:0,13,224	0/0:21,0:21:54.17:0,54,2392	0/1:13,0:12:81.04:105,0,81	0/1:11,0:9:0.43:54,0,0	1/1:3,0:3:6:61,6,0
chr10	39186922	.	CTTTCTT	C	2308.62	PASS	AB=0.965;AC=28;AF=0.500;AN=56;BaseQRankSum=-1.519;DP=352;FS=1.816;HRun=0;HaplotypeScore=85.3696;InbreedingCoeff=0.0257;MQ=43.27;MQ0=17;MQRankSum=1.564;QD=8.65;ReadPosRankSum=-0.126;VQSLOD=1.9139;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:28:99:164,0,133	1/1:3,7:10:11.71:181,12,0	0/0:15,0:1:0:0,0,0	0/0:13,0:3:2.94:0,3,18	1/1:6,10:16:29.19:337,29,0	0/1:13,0:13:39.83:107,0,40	0/0:7,0:7:8.75:0,9,43	0/0:12,0:8:15.65:0,16,128	0/1:4,9:13:23.35:87,0,23	0/1:19,0:19:99:162,0,109	0/1:9,0:8:20.32:55,0,20	1/1:3,0:16:2.86:33,3,0	0/0:4,0:4:4.21:0,4,23	0/1:7,0:7:5.90:6,0,24	1/1:14,1:15:33.68:427,34,0	1/1:9,0:9:23.34:221,23,0	0/1:22,0:20:25.14:310,0,25	0/1:23,0:21:53.26:155,0,53	0/1:14,0:13:43.67:44,0,65	0/1:12,0:12:5.03:5,0,93	0/1:6,0:5:10.92:11,0,48	1/1:5,0:3:9:77,9,0	1/1:1,1:11:2.25:65,2,0	1/1:7,0:4:5.25:30,5,0	0/0:21,0:21:24.03:0,24,589	0/0:9,0:8:13.42:0,13,67	0/1:9,0:7:1.73:2,0,73	0/0:4,0:3:2.29:0,2,6
chr10	39186928	.	T	TTC	516.20	PASS	AB=0.971;AC=20;AF=0.357;AN=56;BaseQRankSum=0.280;DP=371;FS=3.886;HRun=0;HaplotypeScore=84.7739;InbreedingCoeff=-0.0766;MQ=43.68;MQ0=16;MQRankSum=-0.473;QD=2.47;ReadPosRankSum=3.228;VQSLOD=1.4922;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:27:14.44:0,14,150	0/1:10,0:10:1.65:2,0,14	1/1:16,0:2:1.74:5,2,0	0/0:12,0:3:2.94:0,3,18	0/1:18,0:17:30.13:53,0,30	0/1:13,0:13:0.08:43,0,0	1/1:7,0:7:3.90:36,4,0	0/0:13,0:9:18.15:0,18,136	0/1:14,0:13:2.88:3,0,34	0/0:20,0:20:14.57:0,15,159	0/0:10,0:9:5.71:0,6,75	0/0:16,0:15:5.81:0,6,38	0/0:4,0:4:5.84:0,6,35	0/0:8,0:8:11.54:0,12,63	0/1:16,0:16:77.58:78,0,118	0/1:9,0:9:38.71:39,0,87	0/1:17,6:23:40.21:40,0,179	0/0:22,0:20:26.85:0,27,218	0/1:17,0:16:35.78:84,0,36	0/1:13,1:14:19.68:20,0,59	0/1:7,0:6:15.13:16,0,15	1/1:3,0:1:2.98:22,3,0	0/0:10,0:10:2.61:0,3,11	0/0:8,0:5:1:0,1,23	0/1:21,1:22:99:172,0,196	0/0:11,0:10:10.16:0,10,43	0/1:13,0:11:10.70:11,0,21	1/1:5,0:5:2.44:41,2,0
chr10	39187364	.	ATCTCTCTCTCTCTCTCTCTC	A	379.55	PASS	AB=0.936;AC=9;AF=0.167;AN=54;BaseQRankSum=2.812;DP=542;FS=1.501;HRun=0;HaplotypeScore=249.2666;InbreedingCoeff=0.2937;MQ=62.56;MQ0=9;MQRankSum=-1.414;QD=3.48;ReadPosRankSum=-0.172;VQSLOD=2.6784;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:20,1:23:2.99:23,3,0	0/0:8,0:8:9.03:0,9,530	0/0:17,0:13:0.89:0,1,2	0/0:15,0:7:0.89:0,1,2	./.	0/0:22,0:21:10.85:0,11,188	0/0:27,0:27:19:0,19,850	0/0:31,0:31:9.92:0,10,402	0/0:18,0:18:24.08:0,24,915	1/1:11,0:11:5.83:205,6,0	0/0:12,5:18:3.01:0,3,125	0/0:13,0:13:6.02:0,6,381	0/1:15,0:18:16.56:17,0,358	0/1:18,0:19:41:41,0,125	0/1:29,0:29:57.22:57,0,465	0/0:19,0:19:30.09:0,30,1625	0/0:22,0:22:30.09:0,30,1743	1/1:8,1:9:4.19:165,4,0	0/0:24,0:24:29.69:0,30,1637	0/0:13,0:13:3.01:0,3,253	0/0:28,0:26:18.49:0,18,514	0/0:24,0:23:3.01:0,3,123	0/0:11,0:10:6.02:0,6,304	0/0:25,0:23:18.06:0,18,1313	0/0:13,0:14:5.99:0,6,50	0/0:23,0:22:30.10:0,30,1771	0/0:24,0:23:21.06:0,21,1348	0/0:14,0:13:6.02:0,6,314
chr10	39187398	.	CTCTCTCTCTCTCTCTCTCTCTGTG	C	1589.24	PASS	AB=1.000;AC=15;AF=0.288;AN=52;BaseQRankSum=4.902;DP=435;FS=1.453;HRun=0;HaplotypeScore=189.4737;InbreedingCoeff=0.1633;MQ=43.46;MQ0=27;MQRankSum=0.517;QD=7.79;ReadPosRankSum=-2.885;VQSLOD=2.2276;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:25:6:68,6,0	0/0:6,0:5:9.03:0,9,543	./.	./.	1/1:3,0:3:0.47:1,0,0	0/1:20,0:19:36.50:37,0,167	0/1:22,0:22:53.99:54,0,860	0/0:14,0:14:2.73:0,3,1094	0/0:20,0:19:24.08:0,24,939	1/1:8,12:19:32.41:642,32,0	0/1:17,0:16:99:154,0,110	0/0:12,0:11:6.02:0,6,384	0/1:21,0:20:38.03:38,0,474	0/1:26,0:25:68.49:68,0,125	0/1:13,0:12:98.96:99,0,660	0/0:27,0:27:29.81:0,30,1665	0/0:19,0:19:47.77:0,48,2184	1/1:17,0:14:26.15:578,26,0	0/0:17,0:15:38.07:0,38,1749	0/0:6,0:4:3.01:0,3,261	0/0:24,0:21:21.97:0,22,699	0/0:12,0:11:3.01:0,3,123	0/0:5,0:5:6.02:0,6,304	0/0:23,0:20:19.42:0,19,1339	0/0:18,0:16:5.64:0,6,49	0/0:20,0:17:12.58:0,13,2386	0/1:18,0:16:0.34:0,0,1641	0/0:7,0:4:6.02:0,6,324
chr10	39187402	.	CTCTCTCTCTCTCTCTCTGTGTGTG	C	1088.94	PASS	AB=1.000;AC=16;AF=0.308;AN=52;BaseQRankSum=6.313;DP=419;FS=3.121;HRun=0;HaplotypeScore=181.3879;InbreedingCoeff=-0.1779;MQ=43.71;MQ0=25;MQRankSum=-2.966;QD=4.88;ReadPosRankSum=-1.067;VQSLOD=2.8103;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:25:1.25:0,1,3	0/0:6,0:5:9.03:0,9,410	./.	./.	1/1:3,0:3:0.47:1,0,0	0/1:20,0:19:66.26:108,0,66	0/1:21,0:21:99:150,0,624	0/1:15,0:14:99:103,0,725	0/0:19,0:18:18.06:0,18,597	0/1:19,0:18:99:186,0,129	0/0:16,0:15:6.72:0,7,87	0/0:12,0:11:6.02:0,6,288	0/1:21,0:20:74.21:74,0,281	0/1:27,0:26:89.22:103,0,89	0/1:9,0:8:99:142,0,446	0/0:26,0:26:26.80:0,27,1223	0/0:18,0:18:39.50:0,40,1628	1/1:17,0:14:0.50:176,0,0	0/0:15,0:13:28.12:0,28,1273	0/0:6,0:4:3.01:0,3,213	0/1:20,0:17:50.70:51,0,388	0/0:13,0:12:3.01:0,3,77	0/0:5,0:5:6.02:0,6,240	0/0:25,0:22:19.42:0,19,1051	1/1:5,10:13:0.22:1,0,0	0/1:19,0:16:90.49:90,0,1787	0/1:17,0:15:39.28:39,0,1247	0/0:8,0:5:6.02:0,6,249
chr10	39187410	.	CTCTCTCTCTGTGTGTGTGTGTGTGTG	C	1237.11	PASS	AB=0.958;AC=15;AF=0.278;AN=54;BaseQRankSum=5.779;DP=420;FS=0.000;HRun=0;HaplotypeScore=185.3112;InbreedingCoeff=0.0256;MQ=43.13;MQ0=26;MQRankSum=-4.725;QD=7.11;ReadPosRankSum=-0.419;VQSLOD=2.1019;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:25:3.01:0,3,123	0/0:6,0:5:9.01:0,9,133	0/0:4,0:2:6.02:0,6,379	./.	1/1:3,0:3:0.47:1,0,0	1/1:17,0:16:6.02:294,6,0	0/1:18,0:18:99:421,0,376	0/1:20,0:19:99:103,0,354	0/0:15,0:14:6.02:0,6,131	0/0:19,0:18:18.06:0,18,1598	0/0:16,0:15:18.53:0,19,734	0/1:13,0:12:8.20:8,0,137	0/1:11,8:18:16.98:225,0,17	1/1:11,16:27:2.30:211,2,0	0/1:9,0:8:51.81:52,0,316	0/0:24,0:24:17.66:0,18,711	0/0:19,0:19:42.01:0,42,1351	0/0:16,0:13:17.90:0,18,1086	0/1:16,0:14:22.38:22,0,884	0/0:7,0:5:3.01:0,3,201	0/0:16,0:12:10.82:0,11,206	0/0:15,0:14:2.66:0,3,11	0/0:5,0:5:5.99:0,6,49	0/0:26,0:23:19.39:0,19,691	1/1:15,0:13:0.22:1,0,0	0/1:17,0:13:33.33:33,0,1212	0/0:19,0:17:1.56:0,2,784	0/0:9,0:6:6.02:0,6,198
chr10	39187416	.	CTCTGTGTGTGTG	C	2830.16	PASS	AB=0.970;AC=28;AF=0.538;AN=52;BaseQRankSum=0.879;DP=419;FS=4.593;HRun=0;HaplotypeScore=111.8514;InbreedingCoeff=-0.1048;MQ=43.93;MQ0=27;MQRankSum=-2.853;QD=8.74;ReadPosRankSum=2.058;VQSLOD=1.7638;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:28:3:0,3,27	1/1:4,0:3:2.99:24,3,0	0/0:7,0:2:6.02:0,6,219	0/0:11,0:3:5.38:0,5,44	./.	1/1:19,0:18:6.02:151,6,0	0/1:17,0:17:99:210,0,129	1/1:18,0:17:26.94:693,27,0	0/0:13,0:12:2.37:0,2,9	0/1:19,0:18:9.64:10,0,399	0/0:17,0:16:20.88:0,21,180	0/1:14,0:13:3.93:80,0,4	1/1:18,0:17:4.86:93,5,0	1/1:23,0:23:2.59:83,3,0	0/1:9,0:8:12.93:237,0,13	0/1:10,13:23:51.88:76,0,52	0/1:17,0:17:36.03:294,0,36	0/1:16,0:13:56.92:57,0,244	0/1:16,0:14:66.14:116,0,66	0/0:9,0:7:2.97:0,3,20	1/1:14,0:10:8.66:231,9,0	1/1:15,0:14:2.99:24,3,0	./.	0/1:23,0:20:11.59:12,0,43	0/1:15,0:13:0.13:0,0,0	0/1:16,0:12:72.63:193,0,73	0/1:19,0:17:68.46:328,0,68	1/1:9,0:6:1.27:66,1,0
chr10	39187418	.	CTGTGTGTGTG	C	2762.17	PASS	AB=0.691;AC=29;AF=0.580;AN=50;BaseQRankSum=-1.372;DP=418;FS=9.758;HRun=0;HaplotypeScore=104.9817;InbreedingCoeff=0.3601;MQ=43.91;MQ0=26;MQRankSum=-2.633;QD=11.09;ReadPosRankSum=1.828;VQSLOD=1.3565;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:28:3:0,3,27	./.	0/0:9,0:2:6.02:0,6,219	0/0:13,0:3:5.38:0,5,44	0/1:1,6:7:0:0,0,0	1/1:6,0:18:6.02:151,6,0	0/1:7,0:16:84.88:216,0,85	1/1:8,8:17:27.02:694,27,0	0/0:5,8:12:0:0,0,0	0/0:19,0:18:4.29:0,4,403	0/0:18,0:17:23.88:0,24,209	1/1:4,10:13:3.01:86,3,0	1/1:18,0:17:3.01:76,3,0	1/1:22,0:23:2.59:69,3,0	1/1:7,0:6:9.03:235,9,0	1/1:20,0:21:3.01:68,3,0	1/1:16,0:16:8.75:274,9,0	0/1:15,2:14:54.39:54,0,270	1/1:14,1:13:2.97:90,3,0	0/0:5,4:7:0:0,0,0	1/1:15,0:11:8.83:274,9,0	./.	./.	0/0:14,8:20:0.94:0,1,1	0/0:14,0:13:0:0,0,0	1/1:13,2:12:6:175,6,0	1/1:9,9:17:12.04:349,12,0	1/1:4,5:6:3.01:89,3,0
chr10	39187577	.	C	CT	778.53	PASS	AB=0.896;AC=13;AF=0.232;AN=56;BaseQRankSum=-1.419;DP=502;FS=7.261;HRun=14;HaplotypeScore=73.4534;InbreedingCoeff=0.2509;MQ=72.42;MQ0=4;MQRankSum=-0.009;QD=4.78;ReadPosRankSum=-1.521;VQSLOD=1.5198;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:21,12:34:27.16:387,27,0	0/0:9,0:9:7.26:0,7,55	0/0:34,0:10:5.58:0,6,33	0/0:27,0:17:16.54:0,17,92	0/0:17,0:19:6.75:0,7,139	0/0:12,0:12:29.48:0,29,192	0/0:26,0:25:48.98:0,49,371	0/1:25,1:26:11.85:12,0,168	0/1:9,2:13:20.37:20,0,102	0/1:12,2:14:9.43:121,0,9	1/1:5,7:13:6.08:150,6,0	0/0:8,0:9:13.57:0,14,104	0/0:20,0:20:33.78:0,34,214	0/0:15,0:15:38.35:0,38,249	0/0:19,0:19:34.40:0,34,217	0/1:6,2:8:32.82:33,0,62	0/0:25,0:26:49.39:0,49,346	1/1:2,9:11:18.47:160,18,0	0/1:9,0:12:11.40:11,0,41	0/0:16,0:17:35.95:0,36,217	0/0:6,0:6:14.78:0,15,95	0/0:22,0:25:41.47:0,41,247	0/0:14,0:15:15.96:0,16,100	0/0:28,0:28:43.36:0,43,262	0/0:15,0:15:23.70:0,24,151	0/1:17,2:21:20.27:20,0,130	0/0:15,0:15:23.11:0,23,152	0/1:8,2:10:28.97:29,0,89
chr10	39188353	.	TTCC	T	1801.64	PASS	AB=0.906;AC=26;AF=0.464;AN=56;BaseQRankSum=4.341;DP=503;FS=6.103;HRun=0;HaplotypeScore=69.3833;InbreedingCoeff=0.1400;MQ=46.61;MQ0=54;MQRankSum=1.308;QD=5.35;ReadPosRankSum=-2.859;VQSLOD=0.5173;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:31,0:26:68.07:212,0,68	0/0:6,0:6:13.80:0,14,123	0/0:19,0:5:10.22:0,10,74	0/0:22,0:7:14.96:0,15,127	0/0:11,0:11:26.96:0,27,221	1/1:12,0:12:17.77:154,18,0	1/1:20,0:15:15.67:162,16,0	1/1:23,0:16:7.39:80,7,0	0/1:19,6:23:56.30:56,0,205	0/1:15,0:12:19.39:105,0,19	1/1:2,0:13:21.23:140,21,0	0/1:21,0:20:16.71:17,0,311	0/0:25,0:24:47.63:0,48,393	0/0:22,0:21:56.87:0,57,489	0/1:26,0:26:15.74:16,0,276	0/0:27,0:27:23.95:0,24,408	0/0:24,0:23:18.68:0,19,271	1/1:12,0:8:12.48:110,12,0	0/1:8,5:11:52.69:106,0,53	0/1:8,5:11:46.42:46,0,58	1/1:15,0:10:23.55:179,24,0	0/1:14,0:14:22.62:23,0,133	0/0:9,0:9:14.90:0,15,124	0/1:24,0:21:0.40:0,0,299	0/1:9,0:8:39.33:39,0,83	0/1:6,10:14:41.29:201,0,41	0/1:18,0:16:99:188,0,99	1/1:17,0:9:20.79:158,21,0
chr10	39188750	.	C	CT	656.38	PASS	AB=0.851;AC=16;AF=0.296;AN=54;BaseQRankSum=-3.535;DP=258;FS=3.108;HRun=13;HaplotypeScore=29.1333;InbreedingCoeff=0.5418;MQ=65.36;MQ0=3;MQRankSum=1.048;QD=9.12;ReadPosRankSum=-2.427;VQSLOD=0.9488;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:27:38.25:0,38,240	0/1:2,1:3:18.90:19,0,32	0/0:13,0:10:8.02:0,8,74	0/1:6,0:5:0.74:1,0,9	0/0:7,0:7:8.90:0,9,62	0/0:7,0:7:11.86:0,12,82	0/0:6,0:6:11.88:0,12,82	0/1:7,8:12:5.58:91,0,6	0/0:4,0:4:5.94:0,6,41	0/0:13,0:14:21.33:0,21,132	0/0:7,0:7:17.85:0,18,123	0/0:8,0:8:8.87:0,9,62	0/1:7,0:8:10.94:11,0,69	0/0:6,0:6:8.85:0,9,62	0/0:9,0:10:16.85:0,17,109	0/0:5,0:5:2.92:0,3,20	0/0:26,2:26:16.56:0,17,255	0/0:12,0:12:23.77:0,24,164	1/1:3,11:13:33.03:302,33,0	1/1:1,3:4:6.01:56,6,0	1/1:2,5:7:12.01:111,12,0	./.	0/0:8,0:8:17.84:0,18,123	0/0:18,0:18:35.58:0,36,245	0/0:4,0:4:5.94:0,6,41	1/1:3,3:6:8.94:69,9,0	1/1:1,6:7:12.01:111,12,0	1/1:0,2:2:6.01:56,6,0
chr10	39188905	.	T	TCTCTC	368.47	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=0.241;DP=287;FS=13.024;HRun=0;HaplotypeScore=59.4457;InbreedingCoeff=0.5726;MQ=63.77;MQ0=9;MQRankSum=0.036;QD=73.69;ReadPosRankSum=-0.281;VQSLOD=3.7411;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:25:57.20:0,57,1166	0/0:4,0:4:12.04:0,12,244	0/0:23,0:6:15.02:0,15,252	0/0:17,0:10:1.47:0,1,277	0/0:8,0:8:18.06:0,18,334	0/0:4,0:4:12.02:0,12,207	0/0:10,0:10:30.10:0,30,605	0/0:27,0:24:60.21:0,60,1225	0/0:5,0:5:15.04:0,15,271	0/0:13,0:13:36.12:0,36,737	0/0:6,0:6:15.05:0,15,308	0/0:7,0:7:21.07:0,21,431	0/0:8,0:8:21.07:0,21,431	0/0:5,0:5:12.04:0,12,246	0/0:8,0:8:21.06:0,21,368	0/0:5,0:5:12:0,12,205	0/0:11,0:10:12.04:0,12,246	0/0:17,0:17:39.13:0,39,774	0/0:18,0:13:39.10:0,39,752	0/0:3,0:3:9.03:0,9,185	0/0:14,0:14:18.06:0,18,359	0/0:5,0:5:12.04:0,12,243	0/0:3,0:3:9.03:0,9,177	0/0:10,0:10:18.06:0,18,369	1/1:0,5:5:15.05:457,15,0	0/0:9,0:9:21.07:0,21,431	0/0:9,0:9:24.08:0,24,496	0/0:4,0:4:9.03:0,9,181
chr10	39191433	.	AC	A	1234.41	PASS	AB=0.625;AC=13;AF=0.232;AN=56;BaseQRankSum=12.878;DP=569;FS=2.935;HRun=2;HaplotypeScore=102.0447;InbreedingCoeff=0.8896;MQ=90.91;MQ0=0;MQRankSum=-12.440;QD=11.22;ReadPosRankSum=1.250;VQSLOD=2.1127;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:99:0,99,1441	0/0:6,0:6:18.05:0,18,247	0/0:22,0:22:63.20:0,63,887	0/0:28,0:28:84.26:0,84,1200	0/0:21,0:21:63.21:0,63,941	0/0:26,0:26:78.26:0,78,1168	0/0:22,0:22:63.15:0,63,898	1/1:15,3:18:11.94:91,12,0	0/0:16,0:16:48.16:0,48,719	0/0:18,0:18:45.14:0,45,655	0/0:15,0:15:45.14:0,45,656	0/0:17,0:17:51.16:0,51,743	0/0:19,0:19:57.19:0,57,854	0/0:21,0:21:63.21:0,63,944	0/0:30,0:30:87.29:0,87,1303	0/0:21,0:21:63.21:0,63,941	0/0:40,0:40:99:0,120,1767	0/0:20,0:20:60.20:0,60,889	1/1:8,5:12:17.93:140,18,0	1/1:7,14:21:43.60:317,44,0	1/1:7,7:14:26.84:197,27,0	0/0:21,0:21:63.19:0,63,921	0/0:21,0:21:63.21:0,63,942	0/0:26,0:26:75.21:0,75,1090	0/0:16,0:16:48.12:0,48,675	0/1:6,9:15:15.41:173,0,15	1/1:7,16:23:50.78:388,51,0	1/1:1,5:6:14.75:116,15,0
chr10	39191436	.	TG	T	1356.08	PASS	AB=0.526;AC=13;AF=0.232;AN=56;BaseQRankSum=12.760;DP=533;FS=4.627;HRun=1;HaplotypeScore=97.5719;InbreedingCoeff=0.8845;MQ=96.12;MQ0=0;MQRankSum=-12.120;QD=20.55;ReadPosRankSum=2.306;VQSLOD=3.9893;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,99,1582	0/0:4,0:4:12.04:0,12,192	0/0:25,0:25:69.19:0,69,1037	0/0:29,0:29:85.49:0,85,1297	0/0:21,0:21:63.21:0,63,1007	0/0:27,0:27:81.25:0,81,1268	0/0:21,0:21:60.19:0,60,933	1/1:1,3:4:11.98:103,12,0	0/0:17,0:17:51.15:0,51,769	0/0:18,0:18:51.17:0,51,811	0/0:14,0:14:42.14:0,42,671	0/0:19,0:19:57.18:0,57,886	0/0:20,0:20:60.20:0,60,956	0/0:22,0:22:66.21:0,66,1029	0/0:28,0:28:84.29:0,84,1343	0/0:22,0:22:66.21:0,66,1032	0/0:42,0:42:99:0,126,1998	0/0:19,0:19:57.19:0,57,911	1/1:1,5:6:18:159,18,0	1/1:1,14:15:42.43:350,42,0	1/1:1,7:8:17.97:146,18,0	0/0:24,0:24:69.24:0,69,1099	0/0:20,0:20:60.20:0,60,958	0/0:24,0:24:72.25:0,72,1148	0/0:17,0:17:51.17:0,51,813	0/1:1,9:10:18.16:200,0,18	1/1:0,17:17:50.98:437,51,0	1/1:0,6:6:17.93:148,18,0
chr10	39191440	.	TTTGGC	T	2400.54	PASS	AB=0.526;AC=13;AF=0.232;AN=56;BaseQRankSum=12.695;DP=541;FS=1.657;HRun=0;HaplotypeScore=139.4944;InbreedingCoeff=0.8784;MQ=96.88;MQ0=0;MQRankSum=-12.027;QD=38.10;ReadPosRankSum=3.309;VQSLOD=3.8530;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,108,3396	0/0:6,0:6:18.04:0,18,437	0/0:26,0:26:71.01:0,71,2100	0/0:30,0:30:90.30:0,90,2668	0/0:23,0:23:69.24:0,69,2287	0/0:27,0:27:81.27:0,81,2521	0/0:19,0:19:57.17:0,57,1755	1/1:0,3:3:9.03:137,9,0	0/0:17,0:17:51.17:0,51,1587	0/0:19,0:19:54.19:0,54,1781	0/0:14,0:14:42.14:0,42,1366	0/0:20,0:20:60.20:0,60,1902	0/0:20,0:20:60.21:0,60,1999	0/0:22,0:22:66.23:0,66,2164	0/0:29,0:29:87.30:0,87,2849	0/0:23,0:23:69.24:0,69,2299	0/0:41,0:41:99:0,123,4053	0/0:19,0:19:57.20:0,57,1812	1/1:0,5:5:15.05:232,15,0	1/1:0,15:15:45.15:647,45,0	1/1:0,7:7:18.06:260,18,0	0/0:24,0:24:72.23:0,72,2186	0/0:20,0:20:60.16:0,60,1904	0/0:25,0:25:75.21:0,75,2386	0/0:18,0:18:54.19:0,54,1784	0/1:1,9:10:69.88:371,0,70	1/1:1,16:17:51.17:719,51,0	1/1:1,5:6:15.05:221,15,0
chr10	39191446	.	AT	A	520.59	PASS	AB=0.526;AC=13;AF=0.232;AN=56;BaseQRankSum=12.698;DP=543;FS=3.045;HRun=3;HaplotypeScore=101.2559;InbreedingCoeff=0.8795;MQ=96.27;MQ0=0;MQRankSum=-12.081;QD=8.13;ReadPosRankSum=3.089;VQSLOD=1.1199;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,99,1425	0/0:6,0:6:18.05:0,18,241	0/0:25,0:25:66.22:0,66,935	0/0:30,0:30:81.22:0,81,1114	0/0:25,0:25:75.25:0,75,1080	0/0:26,0:25:78.26:0,78,1120	0/0:16,0:16:48.16:0,48,691	1/1:0,3:3:8.52:41,9,0	0/0:16,0:16:45.15:0,45,648	0/0:20,0:20:57.19:0,57,821	0/0:14,0:14:42.13:0,42,587	0/0:20,0:20:60.20:0,60,863	0/0:21,0:21:63.21:0,63,905	0/0:23,0:23:69.22:0,69,975	0/0:29,0:29:84.27:0,84,1191	0/0:23,0:23:69.23:0,69,994	0/0:46,0:46:99:0,126,1759	0/0:17,0:17:51.15:0,51,714	1/1:1,5:6:17.15:86,17,0	1/1:0,15:15:40.49:170,40,0	1/1:0,7:7:15.97:65,16,0	0/0:23,0:23:69.20:0,69,942	0/0:21,0:21:57.18:0,57,802	0/0:25,0:25:69.23:0,69,994	0/0:18,0:18:54.18:0,54,777	0/1:1,9:10:15.13:88,0,15	1/1:2,16:18:45.68:193,46,0	1/1:0,5:5:13.83:62,14,0
chr10	39191451	.	CAA	C	2095.19	PASS	AB=0.550;AC=13;AF=0.232;AN=56;BaseQRankSum=12.559;DP=568;FS=1.625;HRun=3;HaplotypeScore=110.7881;InbreedingCoeff=0.8867;MQ=98.56;MQ0=0;MQRankSum=-11.765;QD=29.51;ReadPosRankSum=3.162;VQSLOD=3.1851;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,120,2247	0/0:7,0:7:21.06:0,21,374	0/0:28,0:28:72.22:0,72,1324	0/0:33,0:33:90.29:0,90,1619	0/0:25,0:25:72.24:0,72,1347	0/0:26,0:25:78.25:0,78,1474	0/0:19,0:19:57.18:0,57,1058	1/1:0,5:5:12.04:157,12,0	0/0:18,0:18:54.19:0,54,1037	0/0:23,0:23:69.24:0,69,1327	0/0:15,0:15:45.14:0,45,837	0/0:19,0:19:57.20:0,57,1101	0/0:22,0:22:66.23:0,66,1268	0/0:24,0:24:72.24:0,72,1352	0/0:29,0:29:84.27:0,84,1582	0/0:24,0:24:69.23:0,69,1306	0/0:42,0:42:99:0,123,2344	0/0:18,0:18:54.19:0,54,1030	1/1:0,7:6:18.06:221,18,0	1/1:0,15:15:45.14:530,45,0	1/1:0,7:7:18.05:213,18,0	0/0:22,0:22:66.22:0,66,1236	0/0:20,0:20:60.18:0,60,1088	0/0:24,0:24:69.21:0,69,1268	0/0:19,0:19:57.20:0,57,1096	0/1:2,9:11:24.75:337,0,25	1/1:0,21:21:54.16:646,54,0	1/1:0,5:5:15.05:179,15,0
chr10	39191876	.	CGCTTTGAAG	C	1017.53	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.503;DP=730;FS=1.082;HRun=0;HaplotypeScore=193.5866;InbreedingCoeff=0.9976;MQ=86.72;MQ0=0;MQRankSum=-5.894;QD=56.53;ReadPosRankSum=1.007;VQSLOD=3.2023;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,117,5632	0/0:14,0:14:42.14:0,42,1974	0/0:24,0:24:66.22:0,66,2540	0/0:26,0:26:69.02:0,69,2884	0/0:24,0:24:69.22:0,69,3111	0/0:20,0:20:54.18:0,54,2649	0/0:26,0:26:78.27:0,78,3765	0/0:38,0:38:99:0,105,5030	0/0:22,0:22:66.23:0,66,3126	0/0:38,0:38:99:0,114,5424	0/0:9,0:9:24.08:0,24,1163	0/0:13,0:13:39.13:0,39,1815	0/0:22,0:22:66.23:0,66,3179	0/0:21,0:21:63.22:0,63,2846	0/0:33,0:33:99:0,99,4847	0/0:34,0:34:99:0,99,4794	0/0:36,0:36:99:0,105,5078	0/0:27,0:27:81.28:0,81,3920	0/0:15,0:15:39.08:0,39,1493	0/0:29,0:29:81.28:0,81,3610	0/0:43,0:43:99:0,129,6127	0/0:19,0:19:54.19:0,54,2366	0/0:22,0:22:66.23:0,66,3224	0/0:30,0:30:90.31:0,90,4347	1/1:3,15:18:36.12:1112,36,0	0/0:36,0:36:99:0,108,5064	0/0:35,0:34:99:0,102,4800	0/0:13,0:13:39.13:0,39,1904
chr10	39192308	.	G	GTT	405.27	PASS	AB=0.556;AC=3;AF=0.054;AN=56;BaseQRankSum=-1.379;DP=496;FS=4.991;HRun=11;HaplotypeScore=90.2014;InbreedingCoeff=0.7194;MQ=70.47;MQ0=0;MQRankSum=-1.107;QD=20.26;ReadPosRankSum=-1.998;VQSLOD=2.7319;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:72.09:0,72,696	0/0:7,0:7:21:0,21,196	0/0:15,0:11:20.21:0,20,146	0/0:9,0:9:1.99:0,2,45	0/0:23,0:23:57.04:0,57,553	0/0:21,0:21:50.86:0,51,479	0/0:12,0:13:35.77:0,36,324	0/0:26,0:26:53.51:0,54,489	0/0:21,0:21:54.01:0,54,524	0/0:23,0:23:60.07:0,60,576	0/0:22,0:22:51.74:0,52,492	0/0:14,0:14:29.99:0,30,291	0/1:2,7:10:1.43:196,0,1	1/1:2,8:10:24.04:314,24,0	0/0:18,0:18:54.09:0,54,524	0/0:15,0:15:39.04:0,39,378	0/0:19,0:20:47.77:0,48,440	0/0:13,0:14:30.52:0,31,274	0/0:23,0:23:58.60:0,59,547	0/0:24,0:24:63.08:0,63,603	0/0:15,0:15:33.81:0,34,309	0/0:12,0:12:33.01:0,33,307	0/0:19,0:20:47.80:0,48,499	0/0:17,0:17:44.85:0,45,420	0/0:21,0:20:50.96:0,51,492	0/0:28,0:29:80.79:0,81,747	0/0:19,0:19:48.05:0,48,464	0/0:8,0:8:21.03:0,21,203
chr10	39193476	.	GA	G	2409.85	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=10.731;DP=617;FS=8.404;HRun=9;HaplotypeScore=61.9701;InbreedingCoeff=0.9969;MQ=73.45;MQ0=0;MQRankSum=-0.036;QD=22.73;ReadPosRankSum=1.136;VQSLOD=4.4669;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,34:36:99:906,99,0	0/0:8,0:8:24.07:0,24,277	0/0:17,0:15:20.71:0,21,201	0/0:20,0:18:35.45:0,35,410	0/0:33,0:33:90.27:0,90,1038	0/0:17,0:17:48.14:0,48,554	0/0:23,0:23:57.17:0,57,657	0/0:30,0:30:78.21:0,78,878	0/0:15,0:15:45.13:0,45,518	1/1:2,21:23:62.99:565,63,0	1/1:3,16:19:42.27:407,42,0	0/0:25,1:26:41.72:0,42,724	0/0:21,0:21:54.14:0,54,612	0/0:25,0:25:63.16:0,63,705	0/0:20,0:20:51.15:0,51,589	0/0:15,0:15:42.09:0,42,464	0/0:19,0:20:50.98:0,51,568	1/1:2,25:28:77.07:692,77,0	0/0:21,0:21:54.10:0,54,597	0/0:26,0:26:69.21:0,69,796	0/0:15,0:14:42.11:0,42,475	0/0:21,0:21:60.16:0,60,681	0/0:29,0:29:78.23:0,78,900	0/0:21,0:21:63.19:0,63,727	0/0:32,0:33:87.09:0,87,984	0/0:18,1:19:23.51:0,24,506	0/0:28,0:28:81.21:0,81,911	0/0:8,0:8:24.07:0,24,277
chr10	39194473	.	CTGAGCGTTAGCCA	C	1688.93	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.518;DP=769;FS=2.130;HRun=0;HaplotypeScore=273.2226;InbreedingCoeff=0.9821;MQ=85.12;MQ0=0;MQRankSum=-5.969;QD=99.35;ReadPosRankSum=-0.082;VQSLOD=3.3898;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,144,9131	0/0:8,0:8:24.08:0,24,1389	0/0:25,0:25:71.36:0,71,4012	0/0:24,0:24:72.24:0,72,3993	0/0:26,0:26:78.25:0,78,4572	0/0:23,0:23:63.22:0,63,3736	0/0:30,0:30:84.29:0,84,5061	0/0:23,0:23:63.22:0,63,3513	0/0:25,0:25:75.26:0,75,4913	0/0:22,0:22:66.23:0,66,4145	0/0:11,0:11:33.10:0,33,1957	0/0:36,0:36:99:0,108,6529	0/0:21,0:21:63.20:0,63,3820	0/0:26,0:26:78.27:0,78,4894	0/0:35,0:34:99:0,105,6614	0/0:32,0:31:96.33:0,96,6042	0/0:42,0:42:99:0,117,7316	0/0:25,0:25:72.25:0,72,4694	0/0:22,0:22:66.23:0,66,4023	0/0:26,0:26:78.27:0,78,4962	0/0:66,0:66:99:0,196,12133	0/0:25,0:25:72.25:0,72,4595	0/0:13,0:13:39.13:0,39,2296	0/0:46,0:46:99:0,135,8631	1/1:0,17:17:45.15:1784,45,0	0/0:29,0:29:78.27:0,78,4488	0/0:36,0:36:99:0,108,6428	0/0:5,0:5:15.01:0,15,816
chr10	39195636	.	ATGTGCGTG	A	1034.61	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.509;DP=877;FS=0.938;HRun=0;HaplotypeScore=221.3385;InbreedingCoeff=0.9644;MQ=64.44;MQ0=7;MQRankSum=-6.714;QD=20.69;ReadPosRankSum=0.907;VQSLOD=2.8508;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,123,4294	0/0:10,0:10:27.09:0,27,1024	0/0:60,0:41:90.29:0,90,2335	0/0:58,0:36:68.56:0,69,1590	0/0:17,0:17:45.15:0,45,1851	0/0:23,0:23:57.20:0,57,2229	0/0:32,0:32:75.26:0,75,2833	0/0:30,0:30:66.23:0,66,2040	0/0:28,0:28:72.25:0,72,2896	0/0:38,0:38:99:0,102,3821	0/0:13,0:13:33.06:0,33,1359	0/0:35,0:35:84.27:0,84,3367	1/1:6,24:30:35.82:938,36,0	1/1:2,18:20:9.03:211,9,0	0/0:27,0:27:72.25:0,72,2926	0/0:24,0:23:72.25:0,72,2699	0/0:37,0:37:93.32:0,93,3604	0/0:15,0:15:35.26:0,35,1615	0/0:21,0:21:51.16:0,51,1549	0/0:21,0:21:54.19:0,54,2175	0/0:101,0:101:99:0,250,9656	0/0:21,0:21:63.11:0,63,2351	0/0:19,0:19:54.17:0,54,1865	0/0:42,0:42:99:0,108,4311	0/0:39,0:39:75.24:0,75,2955	0/0:31,0:31:78.24:0,78,2812	0/0:29,0:28:81.26:0,81,3195	0/0:6,0:6:18.06:0,18,663
chr10	39196101	.	AG	A	5655.95	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=16.052;DP=588;FS=15.692;HRun=2;HaplotypeScore=69.3042;InbreedingCoeff=0.9968;MQ=91.21;MQ0=0;MQRankSum=-4.185;QD=35.57;ReadPosRankSum=1.655;VQSLOD=3.6602;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:99:0,99,1462	0/0:12,0:12:36.12:0,36,538	0/0:20,0:20:60.20:0,60,888	0/0:27,0:27:63.18:0,63,895	0/0:24,0:24:66.21:0,66,959	0/0:17,0:17:51.16:0,51,741	0/0:22,0:22:66.21:0,66,966	1/1:0,24:24:72.22:922,72,0	0/0:12,0:12:36.12:0,36,536	0/0:14,0:14:42.14:0,42,627	0/0:9,0:9:27.09:0,27,405	0/0:23,0:23:66.22:0,66,987	0/0:17,0:17:51.15:0,51,725	0/0:16,0:16:48.15:0,48,698	0/0:20,0:20:54.18:0,54,807	0/0:23,0:23:69.23:0,69,1033	0/0:31,0:31:93.32:0,93,1394	0/0:26,0:26:78.22:0,78,1140	1/1:0,22:22:63.20:817,63,0	1/1:0,18:18:44.95:584,45,0	1/1:1,49:50:99:1714,132,0	0/0:19,0:19:54.10:0,54,742	0/0:13,0:13:36.11:0,36,519	0/0:30,0:30:90.29:0,90,1324	0/0:21,0:21:63.21:0,63,942	1/1:1,22:23:66.19:841,66,0	1/1:0,17:17:45.15:584,45,0	1/1:0,5:5:15.05:195,15,0
chr10	39197246	.	A	AAAATAAAT	4154.90	PASS	AB=0.661;AC=40;AF=0.909;AN=44;BaseQRankSum=0.377;DP=292;FS=2.698;HRun=0;HaplotypeScore=74.9411;InbreedingCoeff=0.1277;MQ=58.45;MQ0=0;MQRankSum=-2.685;QD=17.83;ReadPosRankSum=-3.426;VQSLOD=1.5631;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:9,0:19:46.93:188,0,47	1/1:5,0:5:6.02:147,6,0	./.	./.	1/1:15,0:15:3.17:8,3,0	0/1:5,0:10:39.55:40,0,65	./.	1/1:41,0:41:35.94:394,36,0	1/1:8,0:8:3.01:103,3,0	1/1:13,0:14:6:71,6,0	1/1:3,0:6:9:103,9,0	1/1:8,0:8:3.01:82,3,0	1/1:7,3:11:6.49:239,6,0	1/1:2,0:2:3.01:104,3,0	1/1:8,0:8:6.02:126,6,0	1/1:8,0:11:12.04:364,12,0	1/1:15,0:18:12.03:289,12,0	0/0:18,0:18:30.07:0,30,656	1/1:8,1:9:9.03:365,9,0	1/1:7,0:7:6.01:142,6,0	1/1:6,0:7:3.01:57,3,0	./.	1/1:4,0:4:6.02:207,6,0	./.	1/1:11,1:15:15.05:519,15,0	./.	1/1:8,1:10:2.59:121,3,0	1/1:1,4:5:12.04:487,12,0
chr10	39197918	.	G	GACAC	1063.58	PASS	AB=0.680;AC=26;AF=0.464;AN=56;BaseQRankSum=3.189;DP=528;FS=12.073;HRun=0;HaplotypeScore=114.5403;InbreedingCoeff=0.5096;MQ=66.20;MQ0=9;MQRankSum=-3.396;QD=4.29;ReadPosRankSum=-2.115;VQSLOD=1.2783;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:23:21.50:0,22,308	1/1:5,0:4:6.02:98,6,0	0/0:57,0:26:51.99:0,52,902	0/0:67,0:28:48.17:0,48,719	1/1:4,15:19:3.01:44,3,0	0/0:17,0:17:30.07:0,30,440	0/0:13,0:13:30.10:0,30,541	0/1:41,0:40:52.39:162,0,52	1/1:13,1:14:2.96:61,3,0	0/0:18,0:17:51.16:0,51,734	0/0:12,0:12:12.04:0,12,186	0/1:3,12:15:29.57:68,0,30	0/0:9,0:9:27.09:0,27,479	0/0:15,0:15:35.85:0,36,645	0/1:1,9:11:0:0,0,0	1/1:2,15:17:3.01:74,3,0	1/1:19,0:20:9.03:153,9,0	0/0:13,0:13:16.60:0,17,259	1/1:16,0:15:10.16:125,10,0	0/0:7,0:6:1.33:0,1,3	1/1:32,0:30:3.05:58,3,0	1/1:2,5:7:2.61:34,3,0	1/1:6,0:6:12.03:195,12,0	1/1:6,7:14:3.01:56,3,0	0/0:14,0:14:30.04:0,30,432	0/1:8,0:17:19.84:20,0,67	1/1:11,0:10:5.09:92,5,0	0/0:14,0:14:2:0,2,5
chr10	39197921	.	A	ACACACT	1646.19	PASS	AB=1.000;AC=31;AF=0.554;AN=56;BaseQRankSum=4.334;DP=570;FS=21.992;HRun=0;HaplotypeScore=138.6612;InbreedingCoeff=0.4328;MQ=63.86;MQ0=9;MQRankSum=-4.911;QD=5.13;ReadPosRankSum=-2.536;VQSLOD=0.8010;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:25:0.03:0,0,253	1/1:5,0:4:6.02:98,6,0	0/0:57,0:26:55:0,55,1131	0/0:67,0:28:40.58:0,41,792	1/1:17,0:17:3.01:44,3,0	0/0:20,0:20:32.99:0,33,507	0/0:14,0:14:29.54:0,30,658	0/1:46,0:45:16.59:345,0,17	1/1:7,0:19:8.50:122,8,0	0/0:20,0:18:38.78:0,39,665	0/0:14,0:14:1.18:0,1,167	0/1:18,0:17:26.38:88,0,26	0/0:10,0:10:15.52:0,16,546	0/0:17,0:17:35.76:0,36,811	1/1:13,0:13:2.94:18,3,0	1/1:19,0:19:5.85:108,6,0	1/1:5,17:23:9.03:173,9,0	0/1:15,0:15:14.98:15,0,238	1/1:18,0:17:12.08:150,12,0	1/1:9,0:7:2.19:22,2,0	1/1:31,0:29:12.98:103,13,0	1/1:6,0:6:2.61:34,3,0	1/1:6,0:6:12.03:195,12,0	1/1:15,0:14:2.81:29,3,0	0/0:16,0:16:15.12:0,15,396	0/1:19,0:18:30.65:127,0,31	1/1:14,0:13:8.08:157,8,0	0/0:14,0:14:2.06:0,2,4
chr10	39197922	.	C	CACTCTC	4151.88	PASS	AB=1.000;AC=37;AF=0.661;AN=56;BaseQRankSum=0.005;DP=573;FS=45.129;HRun=0;HaplotypeScore=133.7869;InbreedingCoeff=0.4557;MQ=63.45;MQ0=9;MQRankSum=-3.415;QD=11.28;ReadPosRankSum=-2.367;VQSLOD=0.9812;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:26:31.23:31,0,124	1/1:5,0:4:5.99:49,6,0	0/0:56,0:25:60.24:0,60,960	0/0:66,0:27:44.64:0,45,615	1/1:17,0:17:2.98:22,3,0	0/0:21,0:21:32.92:0,33,375	0/0:14,0:14:29.51:0,30,569	1/1:47,0:46:99:1342,119,0	1/1:20,0:19:8.52:122,9,0	0/0:21,0:19:7.52:0,8,302	0/1:15,0:15:23.70:24,0,83	0/1:20,0:19:5.21:96,0,5	0/0:10,0:10:12.14:0,12,460	0/0:17,0:17:35.73:0,36,679	1/1:12,0:12:2.94:18,3,0	1/1:19,0:19:6.02:108,6,0	1/1:23,0:23:8.92:114,9,0	0/1:15,0:15:56.40:56,0,113	1/1:17,0:16:40.63:446,41,0	1/1:9,0:7:12:124,12,0	1/1:30,0:28:49.35:496,49,0	1/1:5,0:5:2.73:17,3,0	1/1:7,0:7:12:121,12,0	1/1:15,0:14:2.48:14,2,0	0/1:17,0:17:21.58:22,0,147	1/1:19,0:18:21.85:447,22,0	1/1:10,4:14:15.43:245,15,0	1/1:13,0:13:30.39:238,30,0
chr10	39197957	.	TCTCA	T	400.08	PASS	AB=0.946;AC=12;AF=0.222;AN=54;BaseQRankSum=-4.459;DP=369;FS=0.776;HRun=0;HaplotypeScore=96.1628;InbreedingCoeff=0.0543;MQ=44.49;MQ0=9;MQRankSum=3.675;QD=2.72;ReadPosRankSum=-1.244;VQSLOD=1.5070;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:26:8.98:0,9,74	0/0:3,0:2:2.98:0,3,21	0/0:6,0:2:2.98:0,3,21	0/0:17,0:3:2.94:0,3,18	0/1:13,0:12:0.37:1,0,0	0/1:4,13:17:9.07:110,0,9	0/1:20,0:19:44.14:79,0,44	0/0:20,0:18:26.54:0,27,170	0/0:21,0:20:17.70:0,18,137	0/1:10,0:8:34.88:35,0,53	0/0:9,0:9:3:0,3,25	0/0:14,0:13:14.92:0,15,105	0/0:12,0:12:29.22:0,29,247	0/0:15,0:14:26.95:0,27,244	0/0:12,0:12:19.56:0,20,205	0/0:16,0:16:22.31:0,22,214	0/1:14,0:14:2.53:3,0,142	0/0:13,0:13:6.67:0,7,56	0/0:6,0:5:2.47:0,2,20	1/1:10,0:8:10.66:69,11,0	0/1:15,0:12:10.70:11,0,21	./.	0/0:5,0:5:14.49:0,14,121	0/0:9,0:8:2.82:0,3,23	0/0:14,0:13:8.99:0,9,76	0/1:23,0:21:99:125,0,104	0/1:24,0:22:79.69:80,0,131	1/1:1,0:1:2.99:24,3,0
chr10	39197959	.	TCACACACACA	T	281.15	PASS	AB=0.923;AC=3;AF=0.065;AN=46;BaseQRankSum=0.299;DP=368;FS=3.559;HRun=0;HaplotypeScore=117.0588;InbreedingCoeff=0.3554;MQ=42.86;MQ0=8;MQRankSum=-0.286;QD=12.78;ReadPosRankSum=-0.095;VQSLOD=2.4032;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,8:25:0.47:0,0,1	0/0:3,0:2:3.01:0,3,136	./.	./.	0/0:14,0:13:3.01:0,3,98	0/0:20,0:20:20.10:0,20,558	0/0:22,0:21:15.52:0,16,459	0/0:18,0:17:3.01:0,3,37	0/0:21,0:20:12.04:0,12,408	1/1:5,5:8:15.03:303,15,0	./.	0/0:16,0:15:9.50:0,10,389	0/0:13,0:13:21.04:0,21,666	0/0:15,0:14:12.47:0,12,400	0/0:12,0:12:21.07:0,21,840	0/0:16,0:16:18.67:0,19,733	0/0:13,0:13:18.06:0,18,700	0/1:11,1:12:0.22:74,0,0	0/0:6,0:5:3.01:0,3,76	0/0:11,0:9:0.96:0,1,202	0/0:15,0:12:0.50:0,1,182	./.	0/0:6,0:6:15.05:0,15,634	0/0:10,0:9:3.01:0,3,118	./.	0/0:20,0:18:33.10:0,33,809	0/0:24,0:22:41.99:0,42,1113	0/0:1,0:1:3.01:0,3,89
chr10	39198138	.	G	GC	280.79	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-2.231;DP=480;FS=1.234;HRun=6;HaplotypeScore=59.5962;InbreedingCoeff=0.9810;MQ=60.34;MQ0=1;MQRankSum=0.643;QD=21.60;ReadPosRankSum=2.063;VQSLOD=2.9763;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:35:71.32:0,71,789	0/0:16,0:16:42.05:0,42,417	0/0:20,0:18:44.90:0,45,429	0/0:25,0:23:52.73:0,53,492	0/0:21,0:21:51.10:0,51,512	0/0:16,0:16:42.09:0,42,428	0/0:17,0:17:42.09:0,42,428	0/0:25,0:25:54.09:0,54,551	0/0:19,0:19:42.05:0,42,417	0/0:18,0:18:45.09:0,45,455	0/0:26,0:26:72.06:0,72,709	0/0:12,0:12:30.07:0,30,306	0/0:16,0:16:45.10:0,45,458	0/0:13,0:13:30.05:0,30,299	0/0:9,0:9:18.04:0,18,183	0/0:12,0:12:33.04:0,33,326	0/0:22,0:22:51.11:0,51,520	0/0:19,0:19:51.12:0,51,520	0/0:19,0:19:45.09:0,45,459	0/0:11,0:11:24.03:0,24,237	0/0:14,0:14:39.09:0,39,398	0/0:10,0:10:24.05:0,24,240	0/0:8,0:8:21.05:0,21,214	0/0:13,0:13:36.08:0,36,367	1/1:0,13:13:30.10:375,30,0	0/0:24,0:24:63.13:0,63,642	0/0:15,0:15:30.01:0,30,288	0/0:11,0:11:30.07:0,30,306
chr10	39198183	.	CT	C	1182.52	PASS	AB=0.800;AC=17;AF=0.304;AN=56;BaseQRankSum=0.902;DP=413;FS=6.597;HRun=14;HaplotypeScore=59.7570;InbreedingCoeff=0.4321;MQ=63.73;MQ0=3;MQRankSum=1.615;QD=6.10;ReadPosRankSum=-1.455;VQSLOD=1.7925;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:29:54.05:0,54,595	0/0:2,0:3:8.67:0,9,51	0/1:17,1:8:11.08:11,0,31	0/0:17,0:10:2.09:0,2,22	0/0:9,0:18:25.57:0,26,130	0/0:19,0:22:33.12:0,33,413	0/1:9,1:10:2.58:3,0,116	1/1:10,21:31:59.09:390,59,0	0/0:7,0:18:25.84:0,26,144	0/1:14,1:16:3.57:4,0,126	0/1:16,3:19:19.57:20,0,236	0/0:4,0:12:11.55:0,12,64	0/0:13,0:13:20.96:0,21,183	0/0:9,0:9:20.95:0,21,181	0/0:3,0:16:28.57:0,29,157	0/0:5,0:9:14.29:0,14,74	0/0:4,0:21:34.44:0,34,193	0/1:10,4:15:31.89:32,0,147	1/1:6,10:16:29.69:203,30,0	0/1:2,12:14:1.20:136,0,1	1/1:3,6:9:14.87:103,15,0	0/0:1,0:4:8.62:0,9,47	0/0:1,0:4:5.84:0,6,42	0/0:0,0:5:14.20:0,14,72	0/0:16,0:16:34.19:0,34,293	0/1:9,9:19:49.93:113,0,50	1/1:3,11:14:32.71:226,33,0	1/1:3,9:12:17.80:123,18,0
chr10	39198445	.	ATCT	A	3233.06	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=9.378;DP=499;FS=7.117;HRun=0;HaplotypeScore=84.9884;InbreedingCoeff=0.9818;MQ=75.92;MQ0=0;MQRankSum=-4.082;QD=41.45;ReadPosRankSum=1.398;VQSLOD=4.9382;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,27:27:60.19:1067,60,0	0/0:16,0:16:48.16:0,48,1144	0/0:20,0:20:58.87:0,59,1201	0/0:9,0:7:18.03:0,18,359	0/0:29,0:29:84.29:0,84,2018	0/0:18,0:18:51.18:0,51,1257	0/0:18,0:18:51.18:0,51,1257	0/0:26,0:26:78.25:0,78,1738	0/0:28,0:28:81.28:0,81,1971	1/1:0,22:22:63.21:1154,63,0	1/1:0,12:12:18.06:335,18,0	0/0:24,0:24:66.23:0,66,1565	0/0:14,0:14:39.13:0,39,958	0/0:18,0:18:51.18:0,51,1257	0/0:25,0:25:75.24:0,75,1772	0/0:24,0:24:72.25:0,72,1775	0/0:24,0:23:72.25:0,72,1759	1/1:0,17:17:45.15:838,45,0	0/0:11,0:11:33.09:0,33,663	0/0:13,0:13:39.13:0,39,959	0/0:15,0:15:15.05:0,15,365	0/0:14,0:14:42.14:0,42,1012	0/0:14,0:14:42.14:0,42,1011	0/0:9,0:9:27.09:0,27,654	0/0:13,0:13:30.10:0,30,738	0/0:16,0:16:48.16:0,48,1168	0/0:18,0:18:27.09:0,27,639	0/0:5,0:5:12.04:0,12,295
chr10	39198479	.	A	AACACACGCACACACACACAC	9065.96	PASS	AB=0.948;AC=20;AF=0.357;AN=56;BaseQRankSum=0.953;DP=605;FS=40.804;HRun=0;HaplotypeScore=291.9828;InbreedingCoeff=0.5166;MQ=61.50;MQ0=7;MQRankSum=-8.519;QD=33.45;ReadPosRankSum=-7.236;VQSLOD=1.2049;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:32,0:33:99:723,0,115	0/0:13,0:13:39.09:0,39,1551	0/0:32,0:15:13.49:0,13,257	0/1:17,0:6:0.70:1,0,31	0/0:28,0:30:81.08:0,81,2354	0/0:12,0:16:41.99:0,42,1049	0/0:22,0:25:69.14:0,69,2427	1/1:30,0:29:74.97:2121,75,0	0/0:26,0:28:72.09:0,72,2537	0/1:28,0:28:99:1068,0,290	0/1:19,0:20:15.93:387,0,16	0/0:22,0:25:30.28:0,30,1627	0/0:14,0:16:45.10:0,45,1776	0/0:19,0:21:54.07:0,54,1688	0/0:25,0:25:75.16:0,75,2794	0/0:24,0:26:66.08:0,66,1901	0/0:27,0:31:84.17:0,84,3067	0/1:20,0:20:99:969,0,186	1/1:16,0:15:40.49:971,40,0	1/1:13,0:12:8.95:69,9,0	1/1:14,13:34:5.24:301,5,0	0/0:14,0:16:45.10:0,45,1776	0/0:10,0:10:30.01:0,30,777	0/0:17,0:18:54.10:0,54,1939	0/1:17,0:20:37.89:428,0,38	1/1:13,0:13:29.35:672,29,0	1/1:6,6:16:12.04:915,12,0	1/1:5,0:8:8.70:440,9,0
chr10	39199524	.	CG	C	6292.62	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=10.173;DP=530;FS=0.000;HRun=6;HaplotypeScore=59.0634;InbreedingCoeff=0.9726;MQ=73.91;MQ0=1;MQRankSum=-2.448;QD=28.09;ReadPosRankSum=3.997;VQSLOD=5.2480;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:84.25:0,84,1077	1/1:0,9:9:27.07:290,27,0	0/0:22,0:21:50.08:0,50,522	0/0:23,0:18:41.39:0,41,452	1/1:1,22:23:60.11:629,60,0	0/0:11,0:11:33.11:0,33,428	0/0:36,0:36:96.27:0,96,1213	0/0:13,0:13:33.06:0,33,401	1/1:2,22:24:60.15:645,60,0	0/0:18,0:18:51.16:0,51,655	0/0:12,0:12:5.28:0,5,367	1/1:1,25:26:66.17:708,66,0	0/0:12,0:12:30.10:0,30,394	0/0:17,0:17:51.17:0,51,666	1/1:0,22:22:63.16:677,63,0	1/1:1,18:19:48.12:516,48,0	1/1:1,47:48:99:1450,135,0	0/0:17,0:17:42.14:0,42,553	0/0:7,0:7:21.07:0,21,276	0/0:16,0:16:48.08:0,48,582	0/0:23,0:22:57.17:0,57,734	1/1:3,17:20:51.13:547,51,0	1/1:3,10:13:33.08:348,33,0	1/1:2,18:20:45.11:483,45,0	0/0:10,0:10:27.09:0,27,355	0/0:14,0:14:36.12:0,36,473	0/0:18,0:18:51.15:0,51,649	0/0:3,0:3:9.03:0,9,117
chr10	39199530	.	GT	G	1490.32	PASS	AB=0.986;AC=17;AF=0.304;AN=56;BaseQRankSum=16.442;DP=553;FS=2.347;HRun=1;HaplotypeScore=74.9493;InbreedingCoeff=0.6444;MQ=70.04;MQ0=1;MQRankSum=-0.660;QD=6.31;ReadPosRankSum=6.158;VQSLOD=0.8822;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:96.24:0,96,1295	1/1:10,0:10:2.63:59,3,0	0/0:24,0:21:45.30:0,45,627	0/0:24,0:17:47.50:0,48,598	0/1:24,0:24:26.67:184,0,27	0/0:11,0:11:33.11:0,33,497	0/0:35,0:35:97.18:0,97,1418	0/0:15,0:15:45.13:0,45,612	1/1:23,0:23:26.94:156,27,0	0/0:17,0:17:48.15:0,48,701	0/0:13,0:13:28.80:0,29,491	1/1:26,1:27:31.86:206,32,0	0/0:13,0:13:39.05:0,39,506	0/0:18,0:18:54.17:0,54,790	1/1:23,0:23:28.30:175,28,0	0/1:22,0:22:65.40:95,0,65	1/1:50,0:50:50.49:377,50,0	0/0:15,0:15:45.13:0,45,659	0/0:11,0:11:30.08:0,30,404	0/0:16,0:16:45.15:0,45,669	0/0:22,0:21:63.15:0,63,872	1/1:19,1:20:0.12:131,0,0	1/1:11,3:14:8.52:175,9,0	0/1:22,1:23:42.25:119,0,42	0/0:12,0:12:36.08:0,36,487	0/0:14,0:14:42.13:0,42,600	0/0:17,0:17:51.15:0,51,743	0/0:3,0:3:9.03:0,9,138
chr10	39200024	.	GCA	G	5277.67	PASS	AB=0.935;AC=34;AF=0.607;AN=56;BaseQRankSum=3.457;DP=536;FS=1.295;HRun=0;HaplotypeScore=85.6216;InbreedingCoeff=0.7109;MQ=65.29;MQ0=4;MQRankSum=2.090;QD=15.39;ReadPosRankSum=4.281;VQSLOD=4.9097;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,0:33:48.29:238,48,0	1/1:2,9:11:27.08:322,27,0	0/1:26,1:13:8.56:9,0,318	0/0:28,0:20:6.05:0,6,209	1/1:5,15:20:36.98:440,37,0	0/1:11,1:12:11.65:12,0,286	0/0:17,0:17:39.13:0,39,621	0/0:17,1:30:10.47:0,10,364	1/1:3,12:16:35.94:407,36,0	1/1:0,0:22:59.23:286,59,0	1/1:5,0:17:28.31:138,28,0	1/1:1,14:16:38.95:443,39,0	0/1:11,1:12:8.68:9,0,351	0/1:12,1:13:2.65:3,0,445	1/1:8,15:24:50.99:586,51,0	1/1:2,15:19:44.80:493,45,0	1/1:5,17:23:47.98:550,48,0	1/1:3,0:25:39.77:196,40,0	0/0:13,0:20:40.17:0,40,379	0/0:11,0:24:27:0,27,258	0/0:4,0:14:30.01:0,30,305	1/1:2,3:5:9.03:107,9,0	1/1:2,9:11:27.08:322,27,0	1/1:3,14:17:36.11:429,36,0	1/1:10,7:19:7.64:288,8,0	0/0:7,0:24:40.71:0,41,442	0/0:6,0:21:44.99:0,45,414	0/0:6,0:11:21.02:0,21,227
chr10	39200555	.	A	AG	353.74	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=1.040;DP=538;FS=0.000;HRun=0;HaplotypeScore=82.8276;InbreedingCoeff=0.7526;MQ=69.54;MQ0=2;MQRankSum=-0.700;QD=16.84;ReadPosRankSum=1.998;VQSLOD=5.7892;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:26:30.50:0,31,242	0/0:9,0:9:26.93:0,27,248	0/0:25,0:13:17.41:0,17,226	0/0:18,0:15:3.17:0,3,138	0/0:25,0:25:58.54:0,59,463	0/0:15,0:15:44.83:0,45,501	0/0:15,0:15:44.94:0,45,474	0/0:27,0:27:75.90:0,76,769	0/0:15,0:15:41.98:0,42,427	0/0:24,0:23:49.23:0,49,417	0/0:17,0:17:28.70:0,29,257	0/0:19,0:19:45.04:0,45,496	0/0:17,0:17:46.70:0,47,425	0/0:17,0:17:45.03:0,45,488	0/0:19,0:19:47.98:0,48,527	0/0:12,0:11:30.06:0,30,328	0/0:35,0:35:92.43:0,92,902	0/0:16,0:16:4.58:0,5,66	0/0:24,0:23:51.74:0,52,545	0/0:22,0:22:62.76:0,63,609	0/0:23,0:23:62.99:0,63,684	0/0:14,0:14:38.89:0,39,371	0/0:11,0:11:23.97:0,24,233	0/0:18,0:18:49.80:0,50,570	1/1:2,19:21:40.46:448,40,0	0/0:20,0:19:42.66:0,43,442	0/0:12,0:12:22.24:0,22,227	0/0:21,0:20:52.40:0,52,454
chr10	39202616	.	ACGCGCGCGCG	A	8048.03	PASS	AB=0.562;AC=20;AF=0.357;AN=56;BaseQRankSum=14.543;DP=622;FS=0.383;HRun=0;HaplotypeScore=199.1740;InbreedingCoeff=0.7632;MQ=69.19;MQ0=0;MQRankSum=-12.248;QD=30.14;ReadPosRankSum=0.141;VQSLOD=4.4428;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:8,0:47:6.22:470,0,6	0/0:8,0:8:18.06:0,18,864	0/0:14,0:13:2.62:0,3,27	0/0:26,0:17:2.38:0,2,26	0/0:29,0:29:78.25:0,78,3662	0/0:24,0:24:63.22:0,63,2998	0/0:32,0:32:90.29:0,90,3615	1/1:11,20:31:59.98:1249,60,0	0/0:12,0:12:18.06:0,18,929	0/1:7,0:26:12.38:390,0,12	1/1:6,0:22:32.98:312,33,0	0/0:18,0:18:27.09:0,27,1201	0/0:17,0:17:36.12:0,36,1484	0/0:21,0:21:45.15:0,45,1923	0/0:14,0:14:21.07:0,21,1014	0/0:14,0:14:36.08:0,36,1638	0/0:34,0:35:87.28:0,87,3956	1/1:2,0:11:0.93:130,1,0	1/1:6,15:21:42.99:1202,43,0	1/1:3,17:20:30.06:873,30,0	1/1:11,25:36:26.11:762,26,0	0/0:23,0:24:51.17:0,51,2096	0/0:21,0:21:45.14:0,45,1783	0/0:23,0:23:60.19:0,60,2725	0/0:23,0:23:54.19:0,54,2553	1/1:2,23:25:60.06:1409,60,0	1/1:2,17:19:33.07:966,33,0	1/1:3,6:9:9.03:284,9,0
chr10	39203130	.	TA	T	5405.84	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=5.498;DP=429;FS=4.055;HRun=1;HaplotypeScore=55.9578;InbreedingCoeff=0.9465;MQ=71.96;MQ0=0;MQRankSum=-1.447;QD=38.61;ReadPosRankSum=-1.817;VQSLOD=4.6624;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:23:63.20:0,63,983	0/0:7,0:7:21.07:0,21,336	0/1:5,0:5:0.27:0,0,161	0/0:9,0:9:27.07:0,27,400	0/0:31,0:31:93.32:0,93,1481	0/0:24,0:24:72.25:0,72,1149	0/0:8,0:8:24.08:0,24,381	1/1:5,31:36:99:1485,108,0	0/0:12,0:12:36.12:0,36,564	0/0:24,0:24:72.25:0,72,1149	0/0:19,0:19:57.19:0,57,908	0/0:9,0:9:27.09:0,27,432	0/0:9,0:9:27.08:0,27,406	0/0:10,0:10:30.09:0,30,454	0/0:17,0:17:48.16:0,48,763	0/0:10,0:10:30.10:0,30,478	0/0:26,0:26:75.26:0,75,1199	0/0:13,0:13:39.12:0,39,600	1/1:4,21:25:69.22:947,69,0	1/1:0,15:15:45.15:629,45,0	1/1:1,7:8:24.04:311,24,0	0/0:9,0:9:27.09:0,27,432	0/0:6,0:6:18.06:0,18,288	0/0:7,0:7:18.06:0,18,288	0/0:15,0:15:45.14:0,45,693	1/1:2,27:29:39.30:1111,39,0	1/1:2,12:14:42.14:587,42,0	1/1:0,8:8:24.08:336,24,0
chr10	39203178	.	T	TG	13935.26	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-7.747;DP=414;FS=5.505;HRun=1;HaplotypeScore=43.1322;InbreedingCoeff=0.9403;MQ=76.11;MQ0=0;MQRankSum=-2.924;QD=39.48;ReadPosRankSum=3.017;VQSLOD=5.1697;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,25:25:72.24:1077,72,0	1/1:0,12:12:36.12:539,36,0	0/0:12,0:12:31.30:0,31,366	0/0:8,0:8:3.56:0,4,240	1/1:0,25:25:66.16:962,66,0	0/0:18,0:18:51.15:0,51,647	0/0:4,0:4:12.04:0,12,156	1/1:0,40:40:99:1692,120,0	1/1:2,8:10:24.08:360,24,0	1/1:0,16:16:48.16:720,48,0	1/1:0,15:15:42.14:629,42,0	1/1:0,11:11:30.10:450,30,0	0/0:9,0:9:27.08:0,27,337	0/0:10,0:10:30.10:0,30,390	1/1:0,26:26:69.23:1034,69,0	1/1:0,12:12:30.10:450,30,0	1/1:0,22:22:63.21:944,63,0	1/1:1,10:11:30.10:444,30,0	1/1:0,15:15:45.11:613,45,0	1/1:2,17:19:42.02:551,42,0	1/1:3,8:11:21.07:313,21,0	1/1:0,11:11:33.04:467,33,0	1/1:0,6:6:15.05:225,15,0	1/1:0,6:6:15.05:225,15,0	1/1:0,11:11:30.10:450,30,0	1/1:1,18:19:57.19:848,57,0	1/1:1,21:22:54.18:808,54,0	1/1:2,6:7:9.03:135,9,0
chr10	39204304	.	CA	C	1933.26	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.311;DP=873;FS=1.794;HRun=1;HaplotypeScore=98.3498;InbreedingCoeff=1.0000;MQ=77.15;MQ0=0;MQRankSum=-2.230;QD=36.48;ReadPosRankSum=0.443;VQSLOD=3.7223;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,120,1898	0/0:14,0:14:42.10:0,42,621	0/0:29,0:29:80.57:0,81,1113	0/0:38,0:36:97.36:0,97,1321	0/0:35,0:35:96.33:0,96,1525	1/1:0,18:18:45.15:629,45,0	1/1:0,35:35:99:1426,102,0	0/0:30,0:29:87.29:0,87,1360	0/0:49,0:49:99:0,144,2265	0/0:32,0:32:93.32:0,93,1477	0/0:30,0:30:90.31:0,90,1438	0/0:36,0:36:99:0,105,1655	0/0:31,0:31:93.30:0,93,1452	0/0:30,0:30:90.31:0,90,1439	0/0:43,0:43:99:0,129,2038	0/0:51,0:50:99:0,154,2410	0/0:22,0:22:66.23:0,66,1055	0/0:16,0:16:48.16:0,48,767	0/0:25,0:25:72.22:0,72,1080	0/0:21,0:21:60.20:0,60,959	0/0:50,0:50:99:0,148,2339	0/0:32,0:32:93.32:0,93,1466	0/0:27,0:27:78.27:0,78,1246	0/0:40,0:40:99:0,117,1825	0/0:16,0:16:48.16:0,48,748	0/0:35,0:35:99:0,105,1648	0/0:33,0:32:99:0,99,1562	0/0:14,0:14:42.14:0,42,663
chr10	39204934	.	GACCCC	G	2728.12	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=10.105;DP=733;FS=1.926;HRun=0;HaplotypeScore=191.2823;InbreedingCoeff=0.9998;MQ=69.13;MQ0=0;MQRankSum=-10.925;QD=52.46;ReadPosRankSum=-0.007;VQSLOD=3.8294;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:49:99:0,144,4439	0/0:11,0:11:33.11:0,33,1031	0/0:25,0:24:66.21:0,66,1927	0/0:26,0:26:75.26:0,75,2214	0/0:36,0:36:99:0,105,3203	1/1:0,25:25:69.24:1491,69,0	1/1:5,22:27:63.22:1359,63,0	0/0:38,0:38:99:0,108,3386	0/0:26,0:26:78.27:0,78,2377	0/0:27,0:27:78.27:0,78,2470	0/0:15,0:15:42.14:0,42,1306	0/0:27,0:27:81.28:0,81,2513	0/0:25,0:25:75.26:0,75,2330	0/0:20,0:20:57.20:0,57,1762	0/0:34,0:34:96.32:0,96,2938	0/0:23,0:23:69.24:0,69,2125	0/0:29,0:29:87.29:0,87,2650	0/0:18,0:18:54.19:0,54,1666	0/0:19,0:19:57.20:0,57,1804	0/0:28,0:28:78.27:0,78,2394	0/0:35,0:35:99:0,105,3330	0/0:25,0:25:75.26:0,75,2322	0/0:18,0:18:51.18:0,51,1576	0/0:30,0:30:87.30:0,87,2586	0/0:23,0:23:66.22:0,66,1972	0/0:30,0:30:81.28:0,81,2549	0/0:31,0:31:90.31:0,90,2798	0/0:12,0:12:36.12:0,36,1142
chr10	39205201	.	GT	G	2563.90	PASS	AB=0.615;AC=13;AF=0.232;AN=56;BaseQRankSum=10.684;DP=637;FS=7.185;HRun=1;HaplotypeScore=95.7674;InbreedingCoeff=0.8845;MQ=55.37;MQ0=29;MQRankSum=-9.101;QD=24.89;ReadPosRankSum=-1.401;VQSLOD=2.7722;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:59,0:59:99:0,166,2619	0/0:8,0:8:24.08:0,24,383	0/0:12,0:6:15.05:0,15,239	0/0:28,0:12:30.06:0,30,436	0/0:28,0:26:75.26:0,75,1195	0/0:22,0:22:63.21:0,63,1007	0/0:26,0:26:72.23:0,72,1125	1/1:6,23:13:39.10:510,39,0	0/0:23,0:23:69.24:0,69,1100	0/0:16,0:15:42.14:0,42,670	0/0:16,0:16:42.13:0,42,647	0/0:26,0:25:75.24:0,75,1173	0/0:21,0:21:60.20:0,60,959	0/0:23,0:23:69.24:0,69,1102	0/0:35,0:35:99:0,105,1665	0/0:26,0:26:78.25:0,78,1220	0/0:29,0:29:87.24:0,87,1330	0/0:39,0:39:99:0,108,1610	1/1:1,12:11:33.11:459,33,0	1/1:1,13:13:36.12:502,36,0	1/1:1,21:22:31.82:423,32,0	0/0:19,0:19:45.14:0,45,691	0/0:25,0:23:63.20:0,63,981	0/0:31,0:31:93.27:0,93,1452	0/0:22,0:21:57.19:0,57,911	0/1:3,5:7:74.88:188,0,75	1/1:0,14:14:39.13:544,39,0	1/1:0,3:3:9.03:126,9,0
chr10	39206915	.	TAAA	T	4172.96	PASS	AB=0.856;AC=23;AF=0.411;AN=56;BaseQRankSum=5.731;DP=450;FS=2.996;HRun=14;HaplotypeScore=89.8973;InbreedingCoeff=0.7023;MQ=53.62;MQ0=15;MQRankSum=-0.847;QD=18.97;ReadPosRankSum=3.618;VQSLOD=3.0629;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:33:74.73:0,75,625	1/1:4,6:10:20.91:234,21,0	0/0:6,0:4:11.05:0,11,118	0/0:1,0:2:6.02:0,6,73	1/1:3,25:28:65.73:766,66,0	0/1:16,0:14:28.93:54,0,29	0/1:13,0:11:34.37:34,0,56	0/0:9,0:20:23.10:0,23,95	1/1:1,9:10:20.95:245,21,0	0/0:6,0:19:44.69:0,45,335	0/0:7,0:10:6:0,6,66	1/1:3,12:14:20.81:245,21,0	0/0:7,0:8:23.99:0,24,322	0/0:9,0:9:24:0,24,357	1/1:2,17:18:32.92:385,33,0	1/1:6,23:28:50.56:595,51,0	1/1:7,27:34:68.78:806,69,0	0/0:6,0:27:55.04:0,55,415	0/1:4,1:15:17.93:18,0,30	0/0:7,0:16:12.10:0,12,26	0/0:4,0:9:6.23:0,6,13	1/1:1,5:5:15:160,15,0	1/1:2,11:13:30.09:350,30,0	1/1:1,9:10:24.07:280,24,0	0/0:3,0:13:17.94:0,18,139	0/0:5,0:17:22.69:0,23,102	0/0:6,0:20:14.95:0,15,32	0/0:3,0:7:3.74:0,4,8
chr10	39206925	.	AAAAAG	A	518.80	PASS	AB=0.733;AC=3;AF=0.054;AN=56;BaseQRankSum=0.410;DP=444;FS=16.040;HRun=0;HaplotypeScore=117.6017;InbreedingCoeff=0.5784;MQ=53.45;MQ0=12;MQRankSum=-4.462;QD=19.95;ReadPosRankSum=-0.110;VQSLOD=2.0518;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:34:81.24:0,81,1367	0/0:8,0:8:17.86:0,18,97	0/0:8,0:5:15.01:0,15,226	0/0:3,0:2:6:0,6,91	0/0:28,0:28:58.48:0,58,236	1/1:4,11:14:21.07:363,21,0	0/1:7,4:9:9.68:260,0,10	0/0:26,0:24:60.13:0,60,728	0/0:10,0:10:19.69:0,20,69	0/0:21,0:20:44.40:0,44,654	0/0:12,0:10:12.02:0,12,174	0/0:15,0:14:26.36:0,26,153	0/0:8,0:8:21.07:0,21,407	0/0:10,0:10:21.54:0,22,460	0/0:19,0:18:30.64:0,31,134	0/0:26,0:25:47.52:0,48,197	0/0:32,0:32:69.42:0,69,325	0/0:30,0:28:63.19:0,63,987	0/0:19,0:17:47.91:0,48,567	0/0:16,0:15:40.45:0,40,358	0/0:5,0:5:15.03:0,15,155	0/0:9,0:7:18.98:0,19,117	0/0:12,0:12:28.14:0,28,124	0/0:10,0:10:19.84:0,20,71	0/0:12,0:12:21.06:0,21,325	0/0:19,0:18:48.11:0,48,541	0/0:19,0:18:42.10:0,42,475	0/0:6,0:6:9.02:0,9,93
chr10	39207335	.	T	TACACACACAC	6737.38	PASS	AB=1.000;AC=27;AF=0.500;AN=54;BaseQRankSum=3.657;DP=554;FS=7.101;HRun=0;HaplotypeScore=183.4151;InbreedingCoeff=0.8478;MQ=52.96;MQ0=11;MQRankSum=-7.534;QD=24.24;ReadPosRankSum=-5.103;VQSLOD=2.2032;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:31,0:31:17.63:589,18,0	0/0:9,0:10:18.42:0,18,378	./.	0/0:13,0:6:9.03:0,9,177	0/0:31,0:32:65.77:0,66,1521	1/1:5,0:14:9.03:367,9,0	1/1:21,0:21:9.03:237,9,0	1/1:27,0:26:19.87:422,20,0	0/0:19,0:20:42.14:0,42,1148	1/1:22,0:21:33.09:863,33,0	0/1:20,0:20:7.73:336,0,8	0/0:21,0:22:41.16:0,41,1079	0/0:6,0:6:12.04:0,12,309	0/0:16,0:17:33.11:0,33,919	0/0:22,0:23:38.01:0,38,1125	0/0:18,0:22:42.14:0,42,1165	0/0:20,0:20:39.13:0,39,1168	1/1:17,0:16:18.04:637,18,0	1/1:13,0:13:13.58:354,14,0	1/1:20,2:24:15.05:615,15,0	1/1:19,0:18:2.90:45,3,0	0/0:15,0:18:30.56:0,31,815	0/0:20,0:20:36.11:0,36,1011	0/0:24,0:26:45.15:0,45,1263	1/1:14,0:13:5.83:119,6,0	1/1:22,2:23:30.10:961,30,0	1/1:14,5:22:18.06:804,18,0	1/1:2,5:8:9.03:390,9,0
chr10	39207631	.	A	ATATGTATGTATG	1419.71	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.715;DP=900;FS=7.849;HRun=0;HaplotypeScore=325.1931;InbreedingCoeff=0.8544;MQ=66.28;MQ0=7;MQRankSum=-5.838;QD=32.27;ReadPosRankSum=-1.726;VQSLOD=1.5900;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:81.74:0,82,2740	0/0:14,0:14:39.12:0,39,1160	0/0:37,0:23:8.98:0,9,145	0/0:32,0:23:1.42:0,1,66	0/0:30,0:30:72.22:0,72,2310	1/1:9,14:24:21.07:1203,21,0	1/1:20,0:20:12.04:331,12,0	0/0:49,0:49:99:0,99,2458	0/0:48,0:48:99:0,120,3906	0/0:36,0:35:84.27:0,84,2649	0/0:32,0:32:48.06:0,48,1200	0/0:48,0:48:99:0,117,3474	0/0:35,0:35:87.26:0,87,2486	0/0:32,0:32:87.23:0,87,2489	0/0:48,0:48:99:0,117,3401	0/0:35,0:35:75.23:0,75,2318	0/0:27,0:27:66.19:0,66,1946	0/0:16,0:15:45.12:0,45,1395	0/0:25,0:24:51.14:0,51,1217	0/0:26,0:26:50.95:0,51,1569	0/0:40,0:40:96.29:0,96,3097	0/0:25,0:25:66.23:0,66,2169	0/0:29,0:29:65.74:0,66,2050	0/0:34,0:34:71.90:0,72,2062	0/0:27,0:27:72.25:0,72,2286	0/0:31,0:31:75.23:0,75,2220	0/0:38,0:38:96.30:0,96,2855	0/0:14,0:14:42.14:0,42,1376
chr10	39208288	.	GTCTGCC	G	6828.67	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=10.386;DP=698;FS=0.865;HRun=0;HaplotypeScore=162.2352;InbreedingCoeff=0.9654;MQ=49.87;MQ0=20;MQRankSum=-14.197;QD=31.76;ReadPosRankSum=3.229;VQSLOD=4.4461;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:87.21:0,87,2431	1/1:1,2:3:3.01:63,3,0	0/0:35,0:14:27.09:0,27,854	0/0:41,0:22:30.12:0,30,814	1/1:5,13:17:30.10:628,30,0	0/0:17,0:17:30.10:0,30,603	0/0:27,0:27:39.11:0,39,706	0/0:26,0:24:30.09:0,30,654	1/1:7,12:19:27.09:565,27,0	0/0:26,0:25:51.17:0,51,1527	0/0:16,0:16:33.11:0,33,998	1/1:10,23:33:63.22:1319,63,0	0/0:26,0:26:60.17:0,60,1792	0/0:32,0:32:69.24:0,69,2233	1/1:8,27:35:63.22:1319,63,0	1/1:7,16:23:45.15:927,45,0	1/1:8,13:21:24.08:502,24,0	0/0:30,0:29:57.18:0,57,1602	0/0:24,0:17:21.07:0,21,610	0/0:15,0:15:27.08:0,27,814	0/0:46,0:46:99:0,111,3584	1/1:8,19:26:42.01:879,42,0	1/1:3,8:11:12.04:251,12,0	1/1:12,13:25:18.06:377,18,0	0/0:17,0:16:21.07:0,21,641	0/0:20,0:20:30.10:0,30,837	0/0:30,0:29:54.18:0,54,1520	0/0:10,0:10:27.06:0,27,691
chr10	39208367	.	AT	A	1853.88	PASS	AB=0.548;AC=13;AF=0.232;AN=56;BaseQRankSum=14.169;DP=634;FS=13.883;HRun=3;HaplotypeScore=162.5418;InbreedingCoeff=0.8984;MQ=82.68;MQ0=1;MQRankSum=-12.806;QD=18.18;ReadPosRankSum=1.121;VQSLOD=2.1577;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,123,1952	0/0:15,0:15:45.09:0,45,689	0/0:21,0:21:60.20:0,60,938	0/0:27,0:27:75.23:0,75,1150	0/0:23,0:23:60.19:0,60,930	0/0:16,0:16:48.15:0,48,744	0/0:32,0:32:93.27:0,93,1426	1/1:0,10:10:29.92:237,30,0	0/0:33,0:32:87.08:0,87,1273	0/0:25,0:25:75.26:0,75,1198	0/0:9,0:9:27.09:0,27,431	0/0:35,0:35:99:0,99,1546	0/0:25,0:25:75.26:0,75,1198	0/0:28,0:28:84.27:0,84,1294	0/0:33,0:33:93.32:0,93,1470	0/0:30,0:30:90.30:0,90,1406	0/0:24,0:24:63.21:0,63,1006	0/0:28,0:28:84.26:0,84,1304	1/1:2,7:9:23.92:189,24,0	1/1:0,18:18:53.26:371,53,0	1/1:4,13:17:34.03:256,34,0	0/0:18,0:18:51.17:0,51,792	0/0:18,0:18:48.15:0,48,738	0/0:37,0:37:99:0,99,1579	0/0:14,0:14:42.14:0,42,671	0/1:4,19:23:27.24:425,0,27	1/1:0,18:18:53.59:398,54,0	1/1:2,5:7:20.94:168,21,0
chr10	39208370	.	GTGCTGGAGGGAACGGT	G	11054.69	PASS	AB=0.537;AC=13;AF=0.232;AN=56;BaseQRankSum=14.934;DP=620;FS=24.031;HRun=0;HaplotypeScore=312.3857;InbreedingCoeff=0.8954;MQ=82.70;MQ0=1;MQRankSum=-13.270;QD=116.37;ReadPosRankSum=1.926;VQSLOD=3.7717;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,120,7967	0/0:14,0:14:42.14:0,42,2704	0/0:20,0:20:57.20:0,57,2988	0/0:26,0:26:75.26:0,75,4319	0/0:22,0:22:60.21:0,60,4258	0/0:15,0:15:45.15:0,45,3618	0/0:31,0:31:93.29:0,93,6058	1/1:1,8:9:26.58:1037,27,0	0/0:32,0:31:84.29:0,84,5516	0/0:24,0:24:72.24:0,72,4805	0/0:9,0:9:27.09:0,27,1841	0/0:35,0:35:99:0,99,6670	0/0:27,0:27:81.26:0,81,5971	0/0:27,0:27:78.25:0,78,5470	0/0:32,0:32:90.31:0,90,6223	0/0:28,0:28:81.28:0,81,5791	0/0:24,0:24:63.22:0,63,4570	0/0:30,0:30:90.31:0,90,6878	1/1:0,7:7:21.07:896,21,0	1/1:0,18:18:54.19:2252,54,0	1/1:3,12:16:42.14:1512,42,0	0/0:17,0:17:48.16:0,48,3359	0/0:17,0:17:45.14:0,45,2881	0/0:38,0:38:99:0,102,7089	0/0:17,0:17:51.18:0,51,4029	0/1:3,19:22:99:2436,0,265	1/1:0,18:18:54.19:2281,54,0	1/1:0,5:5:15.05:641,15,0
chr10	39208580	.	TAA	T	7569.82	PASS	AB=0.600;AC=29;AF=0.518;AN=56;BaseQRankSum=-9.191;DP=710;FS=2.261;HRun=13;HaplotypeScore=104.8199;InbreedingCoeff=0.9154;MQ=71.55;MQ0=4;MQRankSum=1.053;QD=19.07;ReadPosRankSum=4.299;VQSLOD=4.4082;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,39:45:99:989,102,0	1/1:2,6:8:18.01:168,18,0	0/0:30,0:19:30.32:0,30,335	0/0:12,0:12:14.01:0,14,103	1/1:2,18:21:38.74:357,39,0	0/0:18,0:18:41.86:0,42,331	0/0:19,0:19:38.88:0,39,308	0/0:5,2:38:24.11:0,24,218	1/1:3,23:28:65.76:672,66,0	1/1:9,24:34:71.79:678,72,0	1/1:4,17:22:48.02:458,48,0	1/1:5,24:30:53.79:507,54,0	0/0:28,0:30:76.53:0,77,1012	0/0:26,0:26:71.24:0,71,966	1/1:2,27:29:69.07:669,69,0	1/1:2,21:24:47.54:539,48,0	1/1:6,21:31:50.22:493,50,0	1/1:2,15:18:38.98:428,39,0	0/0:7,1:22:11.25:0,11,125	0/0:2,1:21:17.16:0,17,138	0/0:11,0:36:44.79:0,45,248	1/1:2,29:31:63:661,63,0	1/1:3,17:20:42.03:407,42,0	1/1:4,23:27:50.77:477,51,0	0/0:1,0:18:32.32:0,32,111	0/1:9,3:27:66.88:68,0,67	0/0:7,1:31:27.71:0,28,217	0/0:2,0:10:14.85:0,15,51
chr10	39208590	.	A	AC	832.97	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-7.020;DP=714;FS=2.617;HRun=0;HaplotypeScore=119.1800;InbreedingCoeff=0.9922;MQ=72.55;MQ0=4;MQRankSum=-1.207;QD=21.36;ReadPosRankSum=2.697;VQSLOD=4.8149;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,105,633	0/0:7,0:7:17.61:0,18,109	0/0:32,0:21:51.74:0,52,487	0/0:15,0:13:24.75:0,25,203	0/0:22,0:22:52.85:0,53,337	1/1:1,17:18:38.54:496,39,0	1/1:1,20:21:34.94:459,35,0	0/0:40,0:40:99:0,116,830	0/0:29,0:29:79.09:0,79,483	0/0:30,0:30:81.42:0,81,510	0/0:18,0:18:42.18:0,42,247	0/0:31,0:31:70.58:0,71,462	0/0:26,0:26:71.29:0,71,934	0/0:25,0:25:75.20:0,75,973	0/0:33,0:33:79.24:0,79,498	0/0:31,0:31:79.53:0,80,532	0/0:27,0:27:64.32:0,64,390	0/0:17,0:17:46.83:0,47,278	0/0:26,0:26:75.44:0,75,588	0/0:24,0:24:71.09:0,71,489	0/0:36,0:36:86.27:0,86,646	0/0:33,0:32:82.20:0,82,515	0/0:19,0:19:43.91:0,44,260	0/0:28,0:27:61.65:0,62,389	0/0:22,0:22:53.59:0,54,396	0/0:22,0:22:61.47:0,61,402	0/0:31,0:31:83.19:0,83,594	0/0:9,0:9:20.80:0,21,144
chr10	39208923	.	G	GA	1991.53	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=0.496;DP=690;FS=2.637;HRun=1;HaplotypeScore=71.7777;InbreedingCoeff=0.9977;MQ=79.67;MQ0=0;MQRankSum=-3.931;QD=36.88;ReadPosRankSum=-0.897;VQSLOD=3.7371;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:84.27:0,84,1091	0/0:9,0:9:27.09:0,27,350	0/0:17,0:17:45.15:0,45,583	0/0:29,0:29:78.22:0,78,979	0/0:17,0:17:48.16:0,48,622	1/1:1,20:21:51.17:764,51,0	1/1:0,33:33:90.30:1349,90,0	0/0:33,0:32:96.30:0,96,1218	0/0:29,0:29:84.27:0,84,1090	0/0:26,0:26:78.25:0,78,1013	0/0:13,0:13:33.11:0,33,427	0/0:37,0:37:99:0,105,1348	0/0:25,0:25:75.20:0,75,954	0/0:36,0:36:99:0,105,1348	0/0:37,0:37:99:0,105,1348	0/0:24,0:24:69.22:0,69,896	0/0:34,0:34:99:0,99,1266	0/0:15,0:15:45.10:0,45,564	0/0:14,0:14:42.14:0,42,546	0/0:16,0:16:45.15:0,45,583	0/0:64,0:64:99:0,193,2472	0/0:20,0:20:57.19:0,57,740	0/0:9,0:9:27.09:0,27,349	0/0:26,0:26:75.22:0,75,957	0/0:17,0:17:48.14:0,48,609	0/0:30,0:30:81.26:0,81,1050	0/0:23,0:22:63.20:0,63,818	0/0:8,0:8:24.08:0,24,312
chr10	39209415	.	T	TAGA	22227.26	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-12.330;DP=661;FS=1.388;HRun=0;HaplotypeScore=112.9974;InbreedingCoeff=0.9824;MQ=82.98;MQ0=0;MQRankSum=-7.781;QD=50.75;ReadPosRankSum=1.128;VQSLOD=7.0748;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,138,2256	1/1:1,10:11:24.05:504,24,0	0/0:19,0:19:44.16:0,44,673	0/0:23,0:23:6.05:0,6,759	1/1:1,21:22:57.04:1131,57,0	1/1:17,0:17:51.13:724,51,0	1/1:22,0:22:62.94:785,63,0	1/1:0,18:19:54.19:1185,54,0	1/1:1,16:17:42.14:934,42,0	0/0:23,0:23:69.19:0,69,1122	0/0:16,0:16:48.14:0,48,763	1/1:1,28:29:84.25:1884,84,0	0/0:24,0:24:69.22:0,69,1137	0/0:26,0:26:75.24:0,75,1245	1/1:1,24:25:51.17:1141,51,0	1/1:2,29:31:84.29:1876,84,0	1/1:2,30:32:57.20:1314,57,0	0/0:23,0:23:69.24:0,69,1174	1/1:1,16:17:51.16:1116,51,0	1/1:0,19:20:44.97:839,45,0	1/1:2,41:44:87.96:1909,88,0	1/1:2,12:15:30.10:661,30,0	1/1:1,9:11:21.07:470,21,0	1/1:0,25:26:53.78:1244,54,0	0/0:21,0:21:54.16:0,54,847	1/1:2,24:27:27.12:1517,27,0	1/1:1,33:34:81.28:1797,81,0	1/1:0,19:19:54.14:1194,54,0
chr10	39209419	.	A	AG	1293.81	PASS	AB=1.000;AC=6;AF=0.107;AN=56;BaseQRankSum=6.757;DP=630;FS=0.000;HRun=2;HaplotypeScore=159.6871;InbreedingCoeff=0.6580;MQ=83.48;MQ0=0;MQRankSum=-7.712;QD=17.97;ReadPosRankSum=-3.617;VQSLOD=2.4887;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,141,1794	0/0:10,0:10:13.19:0,13,39	0/0:17,0:17:48.08:0,48,568	0/0:24,0:24:40.71:0,41,674	0/0:22,0:22:23.91:0,24,172	1/1:1,16:17:48.15:641,48,0	1/1:4,16:20:57.19:771,57,0	0/1:18,0:18:4.66:5,0,166	0/0:15,0:15:35.15:0,35,167	0/0:22,0:22:63.20:0,63,818	0/0:15,0:15:42.14:0,42,545	0/0:31,0:31:73.50:0,73,338	0/0:23,0:23:66.19:0,66,841	0/0:25,0:25:72.23:0,72,933	0/0:22,0:22:40.66:0,41,193	0/0:33,0:33:32.21:0,32,354	0/0:27,0:27:53.33:0,53,246	0/0:24,0:24:69.22:0,69,894	0/1:17,0:17:3.30:3,0,225	0/0:19,0:19:33.76:0,34,187	0/0:41,0:41:79:0,79,382	0/0:14,0:14:28.73:0,29,155	0/0:9,0:9:4.01:0,4,39	0/0:23,0:23:49.59:0,50,239	0/0:19,0:19:45.15:0,45,584	0/0:24,0:24:21.90:0,22,306	0/0:31,0:31:40.90:0,41,287	0/0:19,0:19:43.40:0,43,182
chr10	39209422	.	GCGCCTA	G	1995.78	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.897;DP=618;FS=2.229;HRun=0;HaplotypeScore=211.4411;InbreedingCoeff=0.9967;MQ=80.90;MQ0=0;MQRankSum=-8.181;QD=62.37;ReadPosRankSum=-1.744;VQSLOD=3.6220;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,135,4901	0/0:10,0:10:23.92:0,24,773	0/0:13,0:13:39.13:0,39,1324	0/0:23,0:23:65.67:0,66,1795	0/0:21,0:21:57.15:0,57,1956	1/1:1,15:16:48.16:1099,48,0	1/1:2,14:16:48.14:1018,48,0	0/0:18,0:18:48.16:0,48,1639	0/0:17,0:17:51.18:0,51,1819	0/0:22,0:22:66.19:0,66,2262	0/0:15,0:15:42.14:0,42,1537	0/0:31,0:31:87.16:0,87,3000	0/0:24,0:24:69.24:0,69,2399	0/0:24,0:24:72.25:0,72,2460	0/0:23,0:23:56.95:0,57,1795	0/0:33,0:33:87.30:0,87,3181	0/0:26,0:26:55.54:0,56,2166	0/0:24,0:24:69.24:0,69,2517	0/0:18,0:18:48.16:0,48,1705	0/0:19,0:19:42.14:0,42,1527	0/0:39,0:39:87.92:0,88,3184	0/0:15,0:15:36.06:0,36,1213	0/0:9,0:9:21.07:0,21,731	0/0:23,0:23:59.79:0,60,2060	0/0:17,0:17:45.15:0,45,1642	0/0:25,0:25:72.25:0,72,2602	0/0:31,0:31:81.81:0,82,2980	0/0:19,0:19:54.19:0,54,1905
chr10	39209676	.	CTT	C	870.32	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-0.269;DP=446;FS=12.678;HRun=16;HaplotypeScore=67.5968;InbreedingCoeff=0.8110;MQ=66.75;MQ0=1;MQRankSum=3.823;QD=10.36;ReadPosRankSum=5.687;VQSLOD=0.9308;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,27:34:47.75:439,48,0	0/0:8,0:9:19.85:0,20,180	0/0:20,0:11:5.95:0,6,58	0/0:9,0:8:17.58:0,18,161	0/0:18,0:20:43.81:0,44,495	0/0:14,0:14:0:0,0,0	0/0:9,0:8:0:0,0,0	0/0:26,0:31:59.04:0,59,595	0/0:12,0:14:34.78:0,35,371	1/1:2,6:8:17.93:145,18,0	1/1:8,3:12:14.25:111,14,0	0/0:11,0:13:11.40:0,11,291	0/0:12,0:12:20.71:0,21,189	0/0:9,0:9:6.48:0,6,64	0/0:16,0:18:42.06:0,42,470	0/0:15,0:15:30.02:0,30,343	0/0:26,0:29:70.98:0,71,759	1/1:9,19:28:35.58:328,36,0	0/0:16,0:22:40.49:0,40,391	0/0:15,0:15:38.10:0,38,340	0/0:5,0:12:12.36:0,12,101	0/0:6,0:6:12.01:0,12,137	0/0:11,0:12:26.34:0,26,272	0/0:17,0:19:36.43:0,36,412	0/0:11,1:14:15.36:0,15,252	0/0:9,1:11:4.09:0,4,209	0/0:10,0:12:26.97:0,27,266	0/0:14,0:16:38.80:0,39,333
chr10	39211503	.	GATCCGTTT	G	2800.93	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.860;DP=641;FS=10.532;HRun=0;HaplotypeScore=165.7500;InbreedingCoeff=0.9812;MQ=88.72;MQ0=1;MQRankSum=-9.648;QD=62.24;ReadPosRankSum=2.665;VQSLOD=2.8144;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:27:81.21:0,81,3205	0/0:8,0:8:24.06:0,24,831	0/0:31,0:30:81.24:0,81,3048	0/0:45,0:43:99:0,117,4360	0/0:10,0:10:27.09:0,27,1183	0/0:15,0:15:45.15:0,45,1905	0/0:29,0:29:83.91:0,84,3213	0/0:39,0:39:99:0,102,3809	0/0:31,0:31:87.30:0,87,3566	0/0:23,0:23:63.18:0,63,2570	0/0:8,0:8:24.08:0,24,1052	0/0:23,0:23:63.22:0,63,2708	1/1:2,17:19:41.67:1172,42,0	1/1:1,25:26:63.22:1750,63,0	0/0:34,0:34:99:0,99,4109	0/0:33,0:33:90.31:0,90,3846	0/0:23,0:23:66.23:0,66,2711	0/0:21,0:21:60.21:0,60,2492	0/0:26,0:26:66.11:0,66,2785	0/0:10,0:10:27.09:0,27,1125	0/0:34,0:34:93.32:0,93,4008	0/0:13,0:13:39.13:0,39,1694	0/0:20,0:20:60.16:0,60,2526	0/0:39,0:39:99:0,114,4877	0/0:14,0:14:39.13:0,39,1675	0/0:18,0:18:48.16:0,48,1971	0/0:16,0:16:48.16:0,48,2085	0/0:5,0:5:12.04:0,12,527
chr10	39212076	.	T	TCTCTCACACACACACACACA	26551.61	PASS	AB=1.000;AC=31;AF=0.554;AN=56;BaseQRankSum=8.543;DP=697;FS=2.304;HRun=0;HaplotypeScore=411.0198;InbreedingCoeff=-0.1107;MQ=45.67;MQ0=6;MQRankSum=-12.676;QD=49.44;ReadPosRankSum=4.198;VQSLOD=2.4859;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:47,0:46:99:203,0,436	0/1:16,0:16:71.64:1027,0,72	0/0:40,0:21:54.11:0,54,1442	0/0:52,0:36:83.49:0,83,2353	0/0:22,0:22:5.35:0,5,97	0/1:23,0:23:79.77:966,0,80	0/1:26,0:25:99:871,0,155	1/1:18,0:18:48.16:1863,48,0	0/1:21,0:21:65.21:1212,0,65	1/1:25,0:24:37.89:1538,38,0	0/1:30,0:30:83.84:468,0,84	0/1:27,0:27:99:2071,0,180	0/0:27,0:29:81.22:0,81,3249	0/0:14,0:16:48.14:0,48,1917	0/1:19,0:19:99:684,0,111	0/1:23,0:22:99:816,0,140	0/1:16,0:16:99:855,0,111	0/1:15,0:15:99:343,0,107	1/1:22,0:22:66.23:3476,66,0	1/1:15,2:26:9.03:814,9,0	1/1:14,0:14:21.04:573,21,0	0/1:28,0:28:99:212,0,312	0/1:20,0:19:19.06:19,0,172	0/1:28,0:27:99:790,0,101	0/1:28,0:28:99:228,0,106	1/1:16,2:30:84.24:4191,84,0	1/1:14,1:29:35.99:2626,36,0	1/1:6,0:6:15.02:705,15,0
chr10	39212096	.	C	CACACACACA	6754.86	PASS	AB=0.920;AC=27;AF=0.482;AN=56;BaseQRankSum=4.450;DP=550;FS=27.422;HRun=0;HaplotypeScore=193.3894;InbreedingCoeff=-0.3575;MQ=60.78;MQ0=4;MQRankSum=-2.765;QD=15.60;ReadPosRankSum=-5.713;VQSLOD=0.4148;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:18,7:26:4.53:314,0,5	0/1:13,0:15:14.14:163,0,14	0/0:40,0:25:69.11:0,69,1286	0/0:34,0:24:63.21:0,63,1608	0/1:18,0:18:11.34:40,0,11	0/1:12,0:13:13.26:97,0,13	0/1:21,0:22:53.96:69,0,54	0/1:25,0:25:99:275,0,142	0/1:16,0:17:54.14:216,0,54	0/1:15,5:21:99:778,0,136	0/1:19,6:25:23.93:566,0,24	1/1:18,0:21:14.10:469,14,0	0/0:28,0:28:84.25:0,84,2290	0/0:11,0:11:33.11:0,33,950	0/1:11,0:13:25.65:263,0,26	1/1:13,0:16:14.21:332,14,0	0/1:10,0:11:24.20:183,0,24	0/1:12,1:13:27.22:327,0,27	0/1:23,0:23:99:331,0,140	0/1:21,0:22:7.87:306,0,8	0/1:16,0:16:45.60:189,0,46	0/1:15,0:16:12.26:73,0,12	1/1:11,0:13:4.28:174,4,0	1/1:17,0:20:23.81:483,24,0	0/1:16,0:19:7.65:243,0,8	0/1:23,1:24:99:480,0,204	0/1:22,0:22:99:384,0,167	0/0:4,0:4:1.38:0,1,49
chr10	39213490	.	CG	C	192.51	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=2.003;DP=374;FS=2.417;HRun=2;HaplotypeScore=46.2623;InbreedingCoeff=0.7699;MQ=45.74;MQ0=14;MQRankSum=-3.009;QD=7.70;ReadPosRankSum=-0.918;VQSLOD=0.6537;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:60.15:0,60,815	0/0:4,0:4:9.03:0,9,133	0/0:2,0:2:3.01:0,3,35	0/1:6,0:1:0:0,0,0	0/0:19,0:19:38.13:0,38,426	1/1:0,9:9:18.06:231,18,0	1/1:4,6:9:8.93:73,9,0	0/0:24,0:22:53.93:0,54,708	0/0:7,0:7:18.05:0,18,248	0/0:17,0:17:50.87:0,51,628	0/0:17,0:17:36.05:0,36,470	0/0:12,0:12:32.65:0,33,364	0/0:12,0:12:36.02:0,36,448	0/0:15,0:15:27.09:0,27,403	0/0:9,0:9:26.82:0,27,326	0/0:13,0:13:33.06:0,33,412	0/0:19,0:18:51.15:0,51,715	0/0:24,0:22:57.14:0,57,802	0/0:16,0:12:13.81:0,14,371	0/0:9,0:9:24.08:0,24,348	0/0:10,0:9:12.03:0,12,158	0/0:8,0:8:20.86:0,21,281	0/0:11,0:10:21.03:0,21,253	0/0:12,0:12:10.25:0,10,360	0/0:15,0:15:42.09:0,42,552	0/0:20,0:20:25.07:0,25,646	0/0:12,0:12:30.02:0,30,395	0/0:13,0:8:18.03:0,18,244
chr10	39213522	.	A	AAG	260.42	PASS	AB=0.967;AC=8;AF=0.143;AN=56;BaseQRankSum=9.707;DP=591;FS=15.854;HRun=0;HaplotypeScore=159.2691;InbreedingCoeff=0.3455;MQ=48.18;MQ0=14;MQRankSum=-8.117;QD=2.28;ReadPosRankSum=-0.187;VQSLOD=1.9106;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:26:50.89:0,51,383	1/1:11,0:11:4.94:12,5,0	0/0:17,0:10:23.75:0,24,200	0/0:16,0:12:13.77:0,14,158	0/0:33,0:32:33.32:0,33,295	0/1:11,1:13:11.37:167,0,11	1/1:3,10:15:14.02:180,14,0	0/0:28,0:28:5.61:0,6,192	0/0:17,0:17:17.89:0,18,132	0/0:19,0:17:41.51:0,42,333	0/0:13,0:13:32.78:0,33,247	0/0:25,0:25:30.17:0,30,265	0/0:18,0:18:30.49:0,30,329	0/0:23,0:23:40.48:0,40,335	0/0:26,0:25:26.45:0,26,253	0/0:25,0:24:19.89:0,20,175	0/0:24,0:19:6.67:0,7,164	0/0:22,0:21:36.45:0,36,266	0/0:28,0:25:31.42:0,31,311	0/1:16,0:16:18.23:18,0,72	0/0:20,0:18:22.80:0,23,183	0/0:16,0:16:18.05:0,18,118	0/0:20,0:20:2.81:0,3,66	0/0:16,0:16:20.83:0,21,162	0/0:25,0:25:40.28:0,40,327	0/1:35,0:35:7.06:7,0,225	0/1:23,0:23:2.03:2,0,220	0/0:19,0:17:23.14:0,23,224
chr10	39214193	.	CCTGGGGT	C	13301.89	PASS	AB=0.667;AC=37;AF=0.661;AN=56;BaseQRankSum=5.740;DP=389;FS=11.897;HRun=0;HaplotypeScore=137.0414;InbreedingCoeff=0.8514;MQ=84.94;MQ0=1;MQRankSum=-14.588;QD=53.42;ReadPosRankSum=0.676;VQSLOD=4.1194;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:87.30:0,87,3263	1/1:1,6:7:15.05:357,15,0	0/0:20,0:18:51.16:0,51,1365	0/0:19,0:19:41.29:0,41,1164	1/1:2,13:15:36.08:758,36,0	1/1:0,3:3:9.03:209,9,0	1/1:1,5:6:15.05:374,15,0	1/1:2,17:19:51.17:1272,51,0	1/1:2,12:14:36.12:873,36,0	0/0:10,0:10:30.10:0,30,1166	0/0:13,0:13:39.13:0,39,1515	1/1:3,17:20:36.12:839,36,0	0/0:15,0:15:39.13:0,39,1523	0/0:11,0:11:30.10:0,30,1176	1/1:4,16:20:39.13:973,39,0	1/1:1,20:21:60.21:1509,60,0	1/1:4,32:36:87.26:2075,87,0	0/0:18,0:18:51.18:0,51,1940	1/1:2,6:8:18.06:452,18,0	1/1:1,3:4:6.02:131,6,0	1/1:4,16:19:45.15:1005,45,0	1/1:0,6:6:15.05:377,15,0	1/1:3,7:10:18.06:433,18,0	1/1:6,17:23:33.54:776,34,0	0/0:4,0:4:9.03:0,9,353	0/1:4,4:8:99:359,0,100	1/1:1,6:7:18.06:453,18,0	1/1:1,1:2:3.01:76,3,0
chr10	39215358	.	G	GGCGTCTCAT	7065.95	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-7.509;DP=690;FS=1.823;HRun=0;HaplotypeScore=180.9949;InbreedingCoeff=0.9996;MQ=78.64;MQ0=0;MQRankSum=-11.514;QD=113.97;ReadPosRankSum=-0.406;VQSLOD=5.1084;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,114,3441	0/0:10,0:10:30.10:0,30,885	0/0:21,0:20:57.19:0,57,1665	0/0:19,0:19:45.10:0,45,1120	0/0:19,0:18:54.19:0,54,1659	1/1:3,19:24:66.23:3103,66,0	1/1:14,20:38:84.19:3963,84,0	0/0:26,0:26:75.23:0,75,2098	0/0:25,0:25:75.24:0,75,2209	0/0:20,0:20:57.20:0,57,1688	0/0:12,0:12:36.12:0,36,1090	0/0:32,0:32:93.29:0,93,2592	0/0:23,0:23:69.22:0,69,2029	0/0:28,0:28:84.29:0,84,2473	0/0:33,0:33:99:0,99,3043	0/0:30,0:30:90.30:0,90,2699	0/0:38,0:38:99:0,111,3279	0/0:44,0:44:99:0,132,3942	0/0:16,0:16:45.15:0,45,1325	0/0:23,0:23:69.24:0,69,2133	0/0:30,0:30:90.28:0,90,2561	0/0:13,0:13:36.12:0,36,1113	0/0:19,0:19:51.16:0,51,1472	0/0:18,0:18:54.19:0,54,1662	0/0:21,0:21:60.21:0,60,1858	0/0:30,0:30:81.27:0,81,2360	0/0:23,0:21:69.24:0,69,2043	0/0:14,0:14:42.14:0,42,1304
chr10	39215585	.	G	GA	726.05	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-7.197;DP=734;FS=0.838;HRun=4;HaplotypeScore=91.1516;InbreedingCoeff=0.9996;MQ=83.77;MQ0=0;MQRankSum=-1.611;QD=27.93;ReadPosRankSum=1.128;VQSLOD=3.1195;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,105,1191	0/0:13,0:13:39.11:0,39,442	0/0:22,0:22:63.17:0,63,705	0/0:21,0:21:48.60:0,49,544	0/0:14,0:14:42.10:0,42,465	0/0:21,0:21:60.16:0,60,670	0/0:28,0:28:78.22:0,78,885	0/0:40,0:40:99:0,108,1216	0/0:26,0:26:66.19:0,66,748	0/0:28,0:28:78.22:0,78,884	0/0:17,0:17:48.14:0,48,545	0/0:30,0:30:75.18:0,75,829	0/0:34,0:34:93.26:0,93,1055	0/0:21,0:21:57.16:0,57,647	0/0:38,0:38:99:0,102,1147	0/0:42,0:42:99:0,120,1361	0/0:28,0:28:81.23:0,81,918	0/0:29,0:29:84.24:0,84,952	0/0:29,0:29:81.22:0,81,910	0/0:15,0:15:42.12:0,42,476	0/0:30,0:30:81.18:0,81,887	0/0:24,0:24:63.16:0,63,705	0/0:23,0:23:60.17:0,60,681	0/0:36,0:36:99:0,105,1190	1/1:2,24:26:60.20:821,60,0	0/0:17,0:17:48.14:0,48,544	0/0:31,0:31:87.23:0,87,974	0/0:12,0:12:33.09:0,33,374
chr10	39216219	.	TGGGATTAGAGGG	T	2989.15	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.636;DP=635;FS=3.663;HRun=0;HaplotypeScore=235.2701;InbreedingCoeff=0.9990;MQ=89.49;MQ0=0;MQRankSum=-8.267;QD=106.76;ReadPosRankSum=1.008;VQSLOD=3.7421;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,105,6290	0/0:12,0:12:36.12:0,36,2245	0/0:32,0:31:93.32:0,93,4816	0/0:19,0:19:57.20:0,57,2641	0/0:17,0:17:48.16:0,48,2780	1/1:1,11:12:36.11:1330,36,0	1/1:0,16:16:45.15:1781,45,0	0/0:21,0:21:63.21:0,63,3420	0/0:23,0:23:69.24:0,69,4252	0/0:14,0:14:42.14:0,42,2570	0/0:9,0:9:27.09:0,27,1717	0/0:28,0:28:84.26:0,84,4868	0/0:22,0:22:63.22:0,63,3971	0/0:23,0:23:69.24:0,69,4108	0/0:37,0:37:99:0,111,6753	0/0:33,0:33:99:0,99,6297	0/0:26,0:26:78.27:0,78,4708	0/0:15,0:15:45.15:0,45,2657	0/0:20,0:20:60.15:0,60,3010	0/0:18,0:18:54.19:0,54,3303	0/0:51,0:51:99:0,154,9155	0/0:18,0:18:54.19:0,54,3374	0/0:27,0:27:81.28:0,81,4938	0/0:49,0:49:99:0,138,8389	0/0:16,0:16:48.16:0,48,2947	0/0:15,0:15:45.15:0,45,2705	0/0:17,0:17:51.18:0,51,2894	0/0:10,0:10:30.10:0,30,1909
chr10	39216251	.	GT	G	1080.17	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.125;DP=629;FS=2.429;HRun=1;HaplotypeScore=88.2486;InbreedingCoeff=0.9980;MQ=81.74;MQ0=0;MQRankSum=-7.877;QD=30.00;ReadPosRankSum=-0.692;VQSLOD=3.2487;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:75.25:0,75,1120	0/0:10,0:10:27.08:0,27,374	0/0:16,0:16:48.11:0,48,657	0/0:18,0:18:54.12:0,54,726	0/0:11,0:11:33.10:0,33,472	1/1:0,15:15:42.14:577,42,0	1/1:1,20:21:51.03:625,51,0	0/0:19,0:19:57.12:0,57,790	0/0:27,0:27:78.21:0,78,1103	0/0:15,0:15:45.09:0,45,620	0/0:12,0:12:30.09:0,30,426	0/0:23,0:23:60.17:0,60,855	0/0:24,0:24:69.20:0,69,988	0/0:29,0:29:87.26:0,87,1256	0/0:39,0:39:99:0,105,1568	0/0:33,0:33:87.26:0,87,1261	0/0:31,0:31:84.26:0,84,1222	0/0:21,0:21:54.16:0,54,785	0/0:20,0:20:57.17:0,57,822	0/0:15,0:15:45.15:0,45,672	0/0:47,0:47:99:0,126,1826	0/0:19,0:19:57.08:0,57,784	0/0:24,0:24:72.21:0,72,1033	0/0:45,0:45:99:0,123,1716	0/0:26,0:26:78.25:0,78,1145	0/0:14,0:14:42.10:0,42,582	0/0:21,0:21:63.21:0,63,941	0/0:8,0:8:24.08:0,24,357
chr10	39216334	.	AC	A	4144.88	PASS	AC=20;AF=0.370;AN=54;BaseQRankSum=-1.743;DP=402;FS=4.453;HRun=8;HaplotypeScore=60.3715;InbreedingCoeff=0.7671;MQ=74.07;MQ0=0;MQRankSum=-0.341;QD=20.22;ReadPosRankSum=5.278;VQSLOD=3.5855;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:7:6.37:0,6,26	1/1:2,4:6:12.01:115,12,0	0/0:13,0:13:24.52:0,25,268	0/0:16,0:15:29.56:0,30,309	1/1:2,14:16:36.04:342,36,0	0/0:7,0:7:9.95:0,10,61	0/0:14,0:13:6.71:0,7,63	0/0:10,0:10:0.86:0,1,2	1/1:3,9:12:24.04:231,24,0	0/0:1,0:5:5.44:0,5,28	./.	1/1:4,38:42:92.94:880,93,0	0/0:24,0:24:69.19:0,69,820	0/0:20,0:20:42.11:0,42,495	1/1:3,30:33:66.11:637,66,0	1/1:3,25:28:63.07:608,63,0	1/1:2,23:25:54.09:521,54,0	0/0:14,0:14:16.54:0,17,55	0/0:5,0:5:1.82:0,2,5	0/0:3,0:3:2.37:0,2,8	0/0:17,0:17:2.46:0,2,10	1/1:3,6:9:15.02:145,15,0	1/1:2,9:11:27.04:260,27,0	1/1:5,18:23:42.06:405,42,0	0/0:25,0:25:60.18:0,60,722	0/0:7,0:7:2.29:0,2,7	0/0:3,0:3:0:0,0,0	0/0:3,0:3:2.37:0,2,8
chr10	39216335	.	C	CACA	1558.77	PASS	AB=0.538;AC=19;AF=0.339;AN=56;BaseQRankSum=-3.436;DP=395;FS=1.409;HRun=0;HaplotypeScore=82.6240;InbreedingCoeff=0.7867;MQ=74.20;MQ0=0;MQRankSum=-3.326;QD=21.06;ReadPosRankSum=-6.025;VQSLOD=2.3115;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:1,6:7:6.49:127,0,6	0/0:6,0:6:15.02:0,15,156	0/0:13,0:13:31.60:0,32,552	0/0:16,0:15:30.15:0,30,645	0/0:16,0:16:42.06:0,42,406	0/0:7,0:7:14.98:0,15,166	0/0:15,0:14:25.35:0,25,284	1/1:1,7:9:25.26:311,25,0	0/0:11,0:11:27.03:0,27,250	1/1:5,0:5:9.03:154,9,0	1/1:0,0:4:3.01:35,3,0	0/0:42,0:42:99:0,101,938	0/0:24,0:24:69.71:0,70,1276	0/0:18,0:18:51.17:0,51,924	0/0:32,0:32:69.09:0,69,665	0/0:28,0:28:68.63:0,69,661	0/0:25,0:25:60.06:0,60,555	1/1:1,10:14:19.17:483,19,0	1/1:5,0:5:12.03:181,12,0	0/0:0,3:3:1.25:0,1,3	1/1:6,12:18:2.76:70,3,0	0/0:8,0:8:23.99:0,24,219	0/0:11,0:11:30.04:0,30,303	0/0:21,0:21:48.06:0,48,467	0/0:25,0:25:72.23:0,72,1242	1/1:1,6:7:15.05:247,15,0	1/1:3,0:3:6:72,6,0	1/1:0,2:2:3.01:69,3,0
chr10	39216354	.	GCA	G	52.23	PASS	AC=2;AF=0.038;AN=52;BaseQRankSum=1.691;DP=394;FS=2.991;HRun=0;HaplotypeScore=73.4397;InbreedingCoeff=0.8637;MQ=80.83;MQ0=0;MQRankSum=-0.598;QD=4.35;ReadPosRankSum=-2.163;VQSLOD=1.7730;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:27.01:0,27,302	0/0:7,0:7:21.06:0,21,331	0/0:13,0:13:26.01:0,26,312	0/0:14,0:14:18.63:0,19,237	0/0:15,0:15:45.12:0,45,748	./.	1/1:11,1:12:17.59:142,18,0	0/0:9,0:9:26.91:0,27,263	0/0:16,0:16:45.13:0,45,736	0/0:8,0:8:21.05:0,21,265	0/0:6,0:6:17.98:0,18,149	0/0:35,0:35:93.23:0,93,1575	0/0:20,0:20:54.16:0,54,931	0/0:20,0:20:60.13:0,60,962	0/0:33,0:33:96.29:0,96,1673	0/0:26,0:26:78.20:0,78,1294	0/0:23,0:23:60.17:0,60,1053	0/0:8,0:8:20.92:0,21,166	0/0:12,0:12:33.05:0,33,385	0/0:3,0:3:5.99:0,6,50	0/0:22,0:22:36.09:0,36,513	0/0:8,0:8:24.01:0,24,372	0/0:11,0:11:27.09:0,27,494	0/0:17,0:17:45.12:0,45,764	0/0:19,0:19:57.11:0,57,968	0/0:9,0:9:27.04:0,27,304	0/0:7,0:7:20.64:0,21,206	./.
chr10	39217110	.	AG	A	7747.24	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-4.234;DP=637;FS=0.357;HRun=9;HaplotypeScore=86.5252;InbreedingCoeff=0.9691;MQ=83.95;MQ0=1;MQRankSum=-3.223;QD=19.37;ReadPosRankSum=5.164;VQSLOD=4.8794;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,27:33:69.02:631,69,0	1/1:2,9:11:21.01:192,21,0	0/0:32,0:32:40.49:0,40,586	0/0:29,0:26:39.93:0,40,395	1/1:2,21:23:54.01:494,54,0	1/1:3,0:27:31.03:119,31,0	1/1:4,0:24:38.70:114,39,0	0/0:8,0:20:34.74:0,35,206	1/1:4,17:21:41.51:383,42,0	1/1:2,20:22:57:516,57,0	1/1:1,8:10:26.05:226,26,0	1/1:1,24:25:62.85:576,63,0	0/0:32,0:32:84.25:0,84,967	0/0:20,0:20:60.14:0,60,669	1/1:2,33:35:87.04:796,87,0	1/1:5,36:41:89.18:942,89,0	1/1:3,15:18:39.01:357,39,0	1/1:5,16:21:42.02:384,42,0	0/0:5,0:17:31.69:0,32,178	0/0:3,0:11:20.17:0,20,112	0/0:8,0:22:19.89:0,20,101	1/1:1,13:14:39.02:357,39,0	1/1:6,23:29:59.67:589,60,0	1/1:3,28:31:78.03:714,78,0	1/1:0,14:14:39.02:357,39,0	0/0:11,1:25:7.06:0,7,139	0/0:9,0:25:45.05:0,45,233	0/0:1,0:4:5.68:0,6,29
chr10	39217464	.	TAAACTCC	T	2301.48	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.868;DP=718;FS=2.455;HRun=0;HaplotypeScore=174.2931;InbreedingCoeff=0.9833;MQ=91.25;MQ0=0;MQRankSum=-9.028;QD=76.72;ReadPosRankSum=-0.517;VQSLOD=4.0424;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,154,6246	0/0:5,0:5:15.05:0,15,630	0/0:29,0:30:87.13:0,87,3177	0/0:30,0:30:84.22:0,84,3341	0/0:19,0:19:57.18:0,57,2284	1/1:0,21:21:60.21:1668,60,0	1/1:0,9:9:27.09:754,27,0	0/0:35,0:35:99:0,105,4195	0/0:31,0:31:93.31:0,93,3772	0/0:33,0:33:99:0,99,4029	0/0:27,0:27:81.28:0,81,3323	0/0:39,0:39:99:0,117,4913	0/0:39,0:39:99:0,117,4694	0/0:21,0:21:63.22:0,63,2649	0/0:32,0:32:96.33:0,96,4015	0/0:37,0:37:99:0,111,4373	0/0:18,0:18:54.19:0,54,2197	0/0:11,0:11:33.11:0,33,1385	0/0:27,0:27:81.28:0,81,3316	0/0:20,0:20:60.18:0,60,2278	0/0:33,0:33:99:0,99,4156	0/0:21,0:21:63.22:0,63,2538	0/0:19,0:19:57.20:0,57,2280	0/0:20,0:20:60.19:0,60,2386	0/0:18,0:18:54.19:0,54,2248	0/0:31,0:31:93.32:0,93,3850	0/0:36,0:34:99:0,108,4514	0/0:5,0:5:15.05:0,15,630
chr10	39217709	.	T	TA	6204.74	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-12.974;DP=618;FS=1.071;HRun=9;HaplotypeScore=63.0293;InbreedingCoeff=0.9774;MQ=76.17;MQ0=2;MQRankSum=0.407;QD=25.75;ReadPosRankSum=3.024;VQSLOD=5.5229;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:86.97:0,87,755	1/1:1,10:11:30.08:332,30,0	0/0:28,1:23:8.46:0,8,236	0/0:19,0:15:20.93:0,21,180	1/1:7,24:32:63.89:892,64,0	1/1:8,21:29:60.16:664,60,0	1/1:5,16:21:45.12:498,45,0	0/0:33,1:34:44.77:0,45,613	1/1:0,12:12:33.09:365,33,0	0/0:29,0:29:74.48:0,74,634	0/0:29,0:29:71.95:0,72,618	1/1:5,16:21:48.13:530,48,0	0/0:21,0:21:50.97:0,51,440	0/0:15,0:15:29.97:0,30,257	1/1:4,26:30:78.21:859,78,0	1/1:0,20:20:48.60:532,49,0	1/1:5,12:17:7.04:306,7,0	0/0:22,0:22:65.91:0,66,560	0/0:17,0:18:43.02:0,43,339	0/0:30,0:30:77.94:0,78,670	0/0:10,0:10:29.99:0,30,260	1/1:2,14:16:39.11:431,39,0	1/1:4,13:17:33.09:365,33,0	1/1:2,13:15:39.11:431,39,0	0/0:30,0:30:74.96:0,75,647	0/0:23,0:23:50.96:0,51,440	0/0:24,0:24:56.94:0,57,489	0/0:11,0:11:20.99:0,21,182
chr10	39218190	.	CA	C	8450.38	PASS	AB=1.000;AC=47;AF=0.839;AN=56;BaseQRankSum=6.258;DP=574;FS=3.275;HRun=12;HaplotypeScore=128.6214;InbreedingCoeff=0.8088;MQ=67.77;MQ0=1;MQRankSum=-2.923;QD=16.50;ReadPosRankSum=1.260;VQSLOD=4.3260;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,29:34:83.56:638,84,0	1/1:0,9:9:23.91:186,24,0	0/1:18,0:13:27.23:27,0,47	0/0:10,0:8:3.07:0,3,77	1/1:3,14:17:41.82:322,42,0	1/1:4,0:13:11.48:38,11,0	1/1:3,0:25:44.81:132,45,0	1/1:11,26:37:89.59:688,90,0	1/1:1,19:20:50.79:395,51,0	1/1:4,19:24:62.69:480,63,0	1/1:5,8:13:26.88:208,27,0	1/1:6,24:30:41.27:503,41,0	0/0:21,0:21:50.75:0,51,485	0/0:18,0:18:48.07:0,48,474	1/1:8,31:39:59.66:603,60,0	1/1:8,23:31:62.74:488,63,0	1/1:2,19:21:56.78:441,57,0	1/1:2,10:12:32.81:249,33,0	1/1:5,15:20:44.81:348,45,0	1/1:4,10:14:32.86:254,33,0	1/1:5,8:14:28.27:187,28,0	1/1:4,15:19:38.62:294,39,0	1/1:1,18:20:46.86:354,47,0	1/1:3,29:33:82.70:633,83,0	0/0:13,0:13:36.05:0,36,352	1/1:5,19:24:55.87:478,56,0	1/1:3,15:18:44.82:347,45,0	1/1:3,4:7:20.86:157,21,0
chr10	39218215	.	C	CTGGGTGG	25815.52	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-3.909;DP=622;FS=4.069;HRun=0;HaplotypeScore=184.0583;InbreedingCoeff=0.9951;MQ=57.87;MQ0=1;MQRankSum=-17.003;QD=84.09;ReadPosRankSum=-3.911;VQSLOD=4.0743;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:17,21:42:87.11:2760,87,0	0/0:6,0:6:18.06:0,18,485	0/0:18,0:14:17.64:0,18,849	0/0:10,0:10:27.09:0,27,643	0/0:17,0:17:48.12:0,48,1200	1/1:9,7:18:39.09:1245,39,0	1/1:7,20:31:81.23:2831,81,0	1/1:26,17:52:99:4396,153,0	0/0:22,0:22:57.12:0,57,1276	1/1:11,13:25:72.25:2480,72,0	1/1:2,5:10:17.99:629,18,0	0/0:28,0:28:75.24:0,75,1926	0/0:15,0:15:42.10:0,42,958	0/0:25,0:25:69.20:0,69,1690	0/0:42,0:42:99:0,120,3008	0/0:26,0:26:72.25:0,72,1935	0/0:23,0:23:69.24:0,69,1808	1/1:5,7:13:33.11:1189,33,0	1/1:7,5:12:30.08:927,30,0	1/1:5,12:18:48.12:1737,48,0	1/1:11,9:20:33.11:1050,33,0	0/0:20,0:20:54.16:0,54,1341	0/0:13,0:13:39.13:0,39,966	0/0:33,0:33:84.27:0,84,2116	0/0:16,0:16:45.15:0,45,1202	1/1:7,22:31:90.20:3290,90,0	1/1:17,11:29:81.19:2552,81,0	1/1:0,6:6:18.06:731,18,0
chr10	39218371	.	C	CA	946.13	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=2.713;DP=459;FS=0.000;HRun=5;HaplotypeScore=107.4292;InbreedingCoeff=0.3440;MQ=73.98;MQ0=2;MQRankSum=-4.322;QD=7.33;ReadPosRankSum=-3.630;VQSLOD=-0.5873;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:54.11:0,54,563	0/0:9,0:9:8.55:0,9,24	0/0:32,0:25:28.37:0,28,429	0/1:20,0:14:11.79:12,0,45	0/0:18,0:18:4.93:0,5,72	1/1:4,15:19:48.10:581,48,0	1/1:3,16:19:33.11:427,33,0	0/0:18,0:18:48.06:0,48,485	0/0:19,0:19:22.68:0,23,133	0/0:13,0:13:30.01:0,30,288	0/0:14,0:14:23.42:0,23,233	0/1:21,0:21:26.79:27,0,143	0/0:9,0:9:21.01:0,21,213	0/0:10,0:10:21.05:0,21,225	0/1:28,0:28:3.66:4,0,153	0/0:29,0:29:53.01:0,53,224	0/0:28,0:28:60.26:0,60,281	0/0:7,0:7:18.05:0,18,193	0/0:9,0:9:20.95:0,21,201	0/0:13,0:13:33.08:0,33,353	0/0:8,0:8:12.03:0,12,129	0/0:10,0:10:17.39:0,17,81	0/1:10,0:10:35.99:36,0,41	0/1:12,0:12:0.43:0,0,47	0/0:11,0:11:4.67:0,5,62	0/0:21,0:21:48.05:0,48,474	0/0:26,0:26:59.99:0,60,594	0/0:6,0:6:18.03:0,18,184
chr10	39218413	.	ACACCC	A	4779.29	PASS	AB=0.975;AC=29;AF=0.518;AN=56;BaseQRankSum=2.507;DP=478;FS=5.005;HRun=0;HaplotypeScore=151.1489;InbreedingCoeff=-0.0314;MQ=59.04;MQ0=8;MQRankSum=-4.211;QD=12.88;ReadPosRankSum=7.782;VQSLOD=3.3191;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:31,0:31:32.86:33,0,81	1/1:14,0:14:15.14:359,15,0	0/0:37,0:17:27.56:0,28,581	0/0:24,0:12:24.01:0,24,543	0/1:10,0:9:22.06:137,0,22	0/0:21,0:21:22.67:0,23,519	0/0:11,0:11:18.06:0,18,293	0/1:26,0:26:17.66:18,0,132	0/1:17,0:17:11.77:397,0,12	0/1:14,0:13:11.29:13,0,11	1/1:10,0:11:12.41:43,12,0	1/1:21,1:22:36.24:676,36,0	0/0:11,0:11:32.88:0,33,295	0/0:3,0:3:9:0,9,90	0/1:24,3:27:14.58:657,0,15	1/1:18,0:18:22.18:473,22,0	0/1:27,0:27:20.70:632,0,21	0/1:13,0:13:8.56:13,0,9	0/1:17,0:17:30.67:31,0,45	0/1:14,0:15:20.33:49,0,20	0/1:10,0:11:15.24:32,0,15	1/1:10,2:12:33.09:406,33,0	1/1:11,0:11:33.09:401,33,0	1/1:13,0:13:16.07:306,16,0	0/1:9,0:9:22.47:55,0,22	0/1:20,0:19:22.46:22,0,29	0/1:18,0:19:16.31:24,0,16	0/1:12,0:11:2.54:3,0,52
chr10	39218415	.	ACCCC	A	9812.84	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-7.031;DP=480;FS=4.930;HRun=12;HaplotypeScore=126.5356;InbreedingCoeff=0.9496;MQ=59.32;MQ0=8;MQRankSum=-1.561;QD=26.31;ReadPosRankSum=3.101;VQSLOD=3.3769;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,27:32:72.20:1077,72,0	1/1:1,0:14:35.61:285,36,0	0/0:37,0:17:22.56:0,23,491	0/0:24,0:12:21.51:0,22,380	1/1:2,0:9:14.95:136,15,0	0/0:20,0:20:19.75:0,20,255	0/0:11,0:11:17.98:0,18,161	1/1:5,20:25:59.82:858,60,0	1/1:4,0:18:35.91:296,36,0	1/1:2,12:13:36.10:523,36,0	1/1:1,11:12:24.07:352,24,0	1/1:2,0:23:56.87:455,57,0	0/0:3,0:12:9.99:0,10,66	0/0:3,0:3:5.85:0,6,34	1/1:8,0:27:59.89:510,60,0	1/1:1,0:17:41.92:356,42,0	1/1:2,0:25:59.91:536,60,0	1/1:1,12:13:33.11:499,33,0	1/1:5,13:18:39.11:587,39,0	1/1:4,13:16:33.09:497,33,0	1/1:2,9:11:12.04:180,12,0	1/1:2,0:12:32.94:272,33,0	1/1:0,0:11:33:312,33,0	1/1:1,0:13:29.92:240,30,0	1/1:2,0:8:14.94:143,15,0	1/1:4,16:19:48.12:699,48,0	1/1:3,16:19:42.07:635,42,0	1/1:3,10:12:24.07:363,24,0
chr10	39218416	.	C	CA	396.59	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=3.375;DP=474;FS=1.613;HRun=1;HaplotypeScore=135.7057;InbreedingCoeff=0.9204;MQ=61.71;MQ0=8;MQRankSum=-2.662;QD=17.24;ReadPosRankSum=-2.917;VQSLOD=3.0200;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:32:82.38:0,82,590	0/0:14,0:14:35.36:0,35,246	0/0:39,0:18:14.05:0,14,238	0/0:25,0:13:29.50:0,29,262	0/0:10,0:9:9.77:0,10,84	1/1:2,13:15:35.94:359,36,0	1/1:3,5:8:15.50:156,16,0	0/0:25,0:25:49.42:0,49,403	0/0:18,0:18:44.45:0,44,298	0/0:14,0:13:38.64:0,39,271	0/0:12,0:12:23.11:0,23,146	0/0:23,0:23:59.34:0,59,402	0/0:12,0:12:35.81:0,36,271	0/0:4,0:4:11.93:0,12,90	0/0:27,0:27:70.49:0,70,482	0/0:17,0:17:44.53:0,45,302	0/0:25,0:25:67.40:0,67,462	0/0:13,0:13:35.64:0,36,247	0/0:18,0:18:40.67:0,41,287	0/0:16,0:15:28.87:0,29,217	0/0:11,0:11:11.77:0,12,77	0/0:12,0:12:32.58:0,33,217	0/0:11,0:11:20.85:0,21,171	0/0:13,0:13:32.67:0,33,221	0/0:8,0:8:19.48:0,19,115	0/0:20,0:19:42.17:0,42,297	0/0:18,0:18:44:0,44,289	0/0:13,0:12:32.79:0,33,240
chr10	39218739	.	TTGTG	T	1013.98	PASS	AB=0.839;AC=11;AF=0.212;AN=52;BaseQRankSum=0.955;DP=639;FS=10.652;HRun=0;HaplotypeScore=131.4870;InbreedingCoeff=0.1972;MQ=72.75;MQ0=16;MQRankSum=2.489;QD=4.78;ReadPosRankSum=1.071;VQSLOD=2.1415;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:28,2:31:38.05:115,0,38	0/0:12,0:12:17.75:0,18,316	./.	./.	0/0:18,0:17:17.42:0,17,334	0/0:20,0:21:15.03:0,15,274	0/0:20,0:23:21.44:0,21,274	0/0:26,0:25:19.10:0,19,130	0/0:18,0:17:13.27:0,13,368	0/1:22,3:25:11.86:78,0,12	1/1:15,1:16:8.89:105,9,0	0/1:12,9:21:0.68:256,0,1	0/0:11,0:17:5.43:0,5,48	0/1:13,1:13:31.21:31,0,41	0/0:25,0:25:32.81:0,33,602	0/0:30,0:30:28.12:0,28,807	0/1:28,1:32:21.50:22,0,960	0/1:15,6:21:23.54:171,0,24	0/0:23,0:22:9.03:0,9,180	0/0:13,0:11:6.02:0,6,129	0/0:44,0:44:23.94:0,24,258	0/0:14,0:12:21.07:0,21,434	0/1:10,1:14:13.97:72,0,14	1/1:23,13:35:11.09:313,11,0	0/0:10,0:13:9.03:0,9,165	0/0:23,0:22:36.09:0,36,643	0/0:15,0:14:16.26:0,16,271	0/0:15,0:18:9.01:0,9,127
chr10	39219076	.	T	TC	1968.63	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=11.308;DP=723;FS=5.114;HRun=2;HaplotypeScore=76.5335;InbreedingCoeff=0.9979;MQ=88.03;MQ0=0;MQRankSum=-1.371;QD=35.79;ReadPosRankSum=1.120;VQSLOD=4.2698;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,114,1369	0/0:8,0:8:24.08:0,24,297	0/0:28,0:28:80.95:0,81,932	0/0:24,0:24:62.32:0,62,759	0/0:31,0:31:93.21:0,93,1120	1/1:0,24:25:72.24:995,72,0	1/1:1,29:30:78.26:1096,78,0	0/0:34,0:34:93.26:0,93,1114	0/0:18,0:18:48.13:0,48,571	0/0:34,0:33:99:0,99,1197	0/0:28,0:28:75.23:0,75,929	0/0:19,0:19:57.18:0,57,706	0/0:22,0:22:57.18:0,57,705	0/0:25,0:25:72.22:0,72,880	0/0:28,0:28:78.23:0,78,954	0/0:38,0:38:99:0,114,1367	0/0:39,0:39:99:0,114,1382	0/0:18,0:18:54.16:0,54,657	0/0:18,0:18:51.10:0,51,595	0/0:27,0:27:81.19:0,81,983	0/0:31,0:31:87.23:0,87,1040	0/0:17,0:17:48.07:0,48,558	0/0:25,0:25:72.15:0,72,862	0/0:18,0:18:54.16:0,54,658	0/0:27,0:27:81.19:0,81,965	0/0:28,0:28:81.24:0,81,984	0/0:35,0:34:99:0,102,1249	0/0:8,0:8:24.08:0,24,297
chr10	39219366	.	A	AT	2297.34	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-8.121;DP=833;FS=1.700;HRun=2;HaplotypeScore=88.2779;InbreedingCoeff=0.9977;MQ=77.69;MQ0=0;MQRankSum=-1.387;QD=35.34;ReadPosRankSum=-1.076;VQSLOD=3.5536;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:68,0:68:99:0,189,2299	0/0:12,0:12:33.03:0,33,376	0/0:16,0:16:34.55:0,35,365	0/0:21,0:21:55.66:0,56,621	0/0:28,0:28:81.22:0,81,977	1/1:1,23:24:63.21:907,63,0	1/1:2,39:41:99:1512,105,0	0/0:34,0:34:96.29:0,96,1178	0/0:28,0:28:75.23:0,75,929	0/0:23,0:23:66.21:0,66,818	0/0:28,0:28:84.18:0,84,1000	0/0:52,0:52:99:0,156,1909	0/0:36,0:36:96.30:0,96,1189	0/0:32,0:32:93.28:0,93,1139	0/0:37,0:37:99:0,105,1302	0/0:41,0:41:99:0,120,1463	0/0:35,0:35:96.30:0,96,1190	0/0:24,0:24:66.20:0,66,807	0/0:17,0:17:51.16:0,51,632	0/0:33,0:33:96.26:0,96,1150	0/0:53,0:53:99:0,147,1795	0/0:25,0:25:75.24:0,75,930	0/0:21,0:21:60.19:0,60,744	0/0:28,0:28:84.26:0,84,1041	0/0:20,0:20:60.19:0,60,744	0/0:18,0:18:54.17:0,54,670	0/0:29,0:29:87.27:0,87,1078	0/0:9,0:9:21.06:0,21,260
chr10	39220318	.	AG	A	2161.59	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=10.065;DP=301;FS=1.102;HRun=5;HaplotypeScore=42.2682;InbreedingCoeff=0.9281;MQ=86.06;MQ0=0;MQRankSum=-3.512;QD=21.62;ReadPosRankSum=4.681;VQSLOD=2.5406;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:51.13:0,51,656	1/1:1,1:2:3.01:33,3,0	0/0:11,0:11:27.56:0,28,265	0/0:10,0:10:24.04:0,24,285	1/1:1,5:6:15.04:164,15,0	0/0:7,0:6:21.06:0,21,271	0/0:25,0:25:69.22:0,69,925	0/0:9,0:9:24.03:0,24,266	1/1:1,9:10:27.07:296,27,0	0/0:14,0:14:39.13:0,39,529	0/0:8,0:8:21.06:0,21,269	1/1:4,13:17:47.81:481,48,0	0/0:8,0:8:24.08:0,24,325	0/0:4,0:4:12.01:0,12,132	1/1:2,5:7:18.02:185,18,0	1/1:0,8:8:21.06:230,21,0	1/1:8,12:20:36.09:392,36,0	0/0:16,0:16:45.13:0,45,596	0/0:11,0:11:30.06:0,30,359	0/0:6,0:6:15.05:0,15,204	0/0:32,0:32:78.24:0,78,1030	1/1:1,4:5:11.99:118,12,0	1/1:3,4:7:9.02:99,9,0	1/1:2,16:18:35.93:375,36,0	0/0:9,0:9:27.09:0,27,369	0/0:7,0:7:21.06:0,21,274	0/0:5,0:5:15.05:0,15,203	0/0:2,0:2:6.02:0,6,82
chr10	39221465	.	CT	C	3074.72	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=10.266;DP=624;FS=2.819;HRun=8;HaplotypeScore=81.7160;InbreedingCoeff=0.9840;MQ=67.52;MQ0=0;MQRankSum=0.251;QD=21.35;ReadPosRankSum=-0.819;VQSLOD=3.5842;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:96.16:0,96,1138	0/0:7,0:7:18.06:0,18,217	0/0:13,0:14:9.84:0,10,277	0/0:7,0:6:12.03:0,12,139	0/0:31,0:31:81.25:0,81,978	0/0:27,0:27:75.22:0,75,894	0/0:23,1:24:37.22:0,37,732	1/1:13,16:29:45.05:434,45,0	0/0:19,0:19:57.17:0,57,689	0/0:24,0:24:63.19:0,63,752	0/0:14,0:14:42.10:0,42,485	0/0:34,0:34:90.23:0,90,1057	0/0:28,0:28:78.24:0,78,941	0/0:26,0:26:75.23:0,75,906	0/0:29,0:29:84.25:0,84,1003	0/0:20,0:20:57.17:0,57,689	0/0:23,0:23:66.20:0,66,797	0/0:31,0:31:87.27:0,87,1051	1/1:2,17:19:51.08:492,51,0	1/1:2,19:21:48.06:464,48,0	1/1:1,22:23:60.10:579,60,0	0/0:24,0:24:66.19:0,66,785	0/0:21,0:21:57.17:0,57,688	0/0:22,0:22:66.20:0,66,796	0/0:19,0:19:57.15:0,57,675	1/1:1,18:19:54.09:522,54,0	1/1:1,19:20:48.07:463,48,0	1/1:0,13:13:33.05:319,33,0
chr10	39222059	.	TGGCA	T	1781.76	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.134;DP=710;FS=13.436;HRun=0;HaplotypeScore=115.3998;InbreedingCoeff=0.9760;MQ=78.44;MQ0=1;MQRankSum=-1.246;QD=34.94;ReadPosRankSum=3.757;VQSLOD=2.7397;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,120,2956	0/0:4,0:4:12.04:0,12,320	0/0:19,0:19:42.62:0,43,1057	0/0:14,0:14:42.14:0,42,1037	0/0:17,0:17:39.12:0,39,941	1/1:1,27:27:54.19:1008,54,0	1/1:3,20:23:48.16:896,48,0	0/0:33,0:33:75.22:0,75,1619	0/0:23,0:23:66.23:0,66,1613	0/0:22,0:22:60.20:0,60,1494	0/0:13,0:13:30.09:0,30,714	0/0:37,0:37:99:0,102,2357	0/0:26,0:26:72.25:0,72,1634	0/0:24,0:24:66.23:0,66,1638	0/0:31,0:31:87.30:0,87,2174	0/0:36,0:36:99:0,108,2731	0/0:40,0:40:99:0,117,2886	0/0:37,0:37:99:0,105,2586	0/0:12,0:12:33.11:0,33,848	0/0:18,0:18:45.13:0,45,1032	0/0:45,0:45:99:0,126,2760	0/0:18,0:18:48.16:0,48,1206	0/0:24,0:24:66.67:0,67,1586	0/0:50,0:50:99:0,129,3347	0/0:20,0:20:54.17:0,54,1300	0/0:21,0:21:63.16:0,63,1451	0/0:24,0:24:60.19:0,60,1462	0/0:6,0:6:15.05:0,15,400
chr10	39222650	.	TA	T	1670.14	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.733;DP=716;FS=5.518;HRun=2;HaplotypeScore=77.0563;InbreedingCoeff=0.9996;MQ=69.29;MQ0=0;MQRankSum=-2.965;QD=33.40;ReadPosRankSum=0.874;VQSLOD=3.7429;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,108,1614	0/0:10,0:10:30.10:0,30,434	0/0:20,0:18:45.30:0,45,701	0/0:20,0:19:51.03:0,51,715	0/0:27,0:27:78.26:0,78,1148	1/1:0,19:19:57.19:740,57,0	1/1:0,31:31:81.26:1052,81,0	0/0:36,0:36:99:0,105,1555	0/0:27,0:27:78.25:0,78,1149	0/0:36,0:36:99:0,102,1529	0/0:19,0:19:57.19:0,57,854	0/0:40,0:40:99:0,120,1780	0/0:26,0:26:78.25:0,78,1149	0/0:23,0:23:66.21:0,66,969	0/0:24,0:24:72.23:0,72,1059	0/0:25,0:25:75.23:0,75,1086	0/0:27,0:27:81.27:0,81,1214	0/0:32,0:32:96.33:0,96,1438	0/0:21,0:21:60.20:0,60,899	0/0:33,0:33:96.31:0,96,1417	0/0:23,0:23:66.22:0,66,987	0/0:21,0:21:60.20:0,60,899	0/0:14,0:14:42.12:0,42,589	0/0:48,0:48:99:0,138,2040	0/0:25,0:25:75.23:0,75,1085	0/0:23,0:23:69.23:0,69,1033	0/0:18,0:18:54.18:0,54,809	0/0:12,0:12:33.07:0,33,451
chr10	39223610	.	TGGCC	T	1998.25	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.634;DP=641;FS=13.367;HRun=0;HaplotypeScore=109.8371;InbreedingCoeff=0.9746;MQ=73.42;MQ0=0;MQRankSum=-1.278;QD=37.00;ReadPosRankSum=0.298;VQSLOD=3.1615;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,111,2690	0/0:11,0:11:33.11:0,33,822	0/0:13,0:13:15.39:0,15,344	0/0:9,0:9:12.61:0,13,122	0/0:14,0:14:33.11:0,33,813	1/1:1,22:23:57.20:1061,57,0	1/1:2,29:30:57.20:1059,57,0	0/0:23,0:23:63.16:0,63,1480	0/0:20,0:20:54.14:0,54,1359	0/0:28,0:28:72.24:0,72,1787	0/0:20,0:20:60.21:0,60,1522	0/0:30,0:30:81.28:0,81,2032	0/0:20,0:20:57.20:0,57,1482	0/0:31,0:31:84.29:0,84,2207	0/0:38,0:38:99:0,111,2880	0/0:32,0:32:90.27:0,90,2247	0/0:26,0:26:75.26:0,75,1980	0/0:21,0:21:60.19:0,60,1394	0/0:18,0:18:48.16:0,48,1138	0/0:20,0:20:51.18:0,51,1272	0/0:33,0:33:93.32:0,93,2398	0/0:20,0:20:54.18:0,54,1395	0/0:24,0:24:69.24:0,69,1753	0/0:29,0:29:87.26:0,87,2150	0/0:27,0:27:78.22:0,78,1889	0/0:19,0:19:57.20:0,57,1467	0/0:17,0:16:48.15:0,48,1112	0/0:7,0:7:18.06:0,18,454
chr10	39224280	.	G	GT	2560.25	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.568;DP=886;FS=6.453;HRun=0;HaplotypeScore=96.0340;InbreedingCoeff=0.9988;MQ=81.62;MQ0=0;MQRankSum=-3.417;QD=36.58;ReadPosRankSum=0.275;VQSLOD=3.0503;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,144,1952	0/0:8,0:8:24.06:0,24,316	0/0:24,0:24:70.21:0,70,843	0/0:23,0:23:66.03:0,66,810	0/0:24,0:24:68.78:0,69,879	1/1:0,24:24:63.21:964,63,0	1/1:2,44:46:99:1718,114,0	0/0:34,0:34:99:0,99,1261	0/0:32,0:32:96.29:0,96,1301	0/0:30,0:30:87.13:0,87,1153	0/0:12,0:12:36.07:0,36,451	0/0:60,0:60:99:0,181,2461	0/0:46,0:46:99:0,138,1877	0/0:41,0:41:99:0,123,1699	0/0:61,0:61:99:0,178,2463	0/0:53,0:53:99:0,159,2165	0/0:22,0:22:66.22:0,66,921	0/0:22,0:22:66.22:0,66,923	0/0:22,0:22:63.13:0,63,793	0/0:17,0:17:51.17:0,51,710	0/0:69,0:69:99:0,208,2771	0/0:20,0:20:60.18:0,60,806	0/0:14,0:14:42.14:0,42,585	0/0:31,0:31:93.27:0,93,1245	0/0:34,0:34:99:0,102,1375	0/0:29,0:29:84.26:0,84,1129	0/0:25,0:25:75.17:0,75,1003	0/0:12,0:12:36.11:0,36,486
chr10	39224802	.	A	AG	2286.31	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.066;DP=809;FS=8.587;HRun=5;HaplotypeScore=84.4157;InbreedingCoeff=0.9837;MQ=85.94;MQ0=0;MQRankSum=-1.213;QD=33.13;ReadPosRankSum=1.131;VQSLOD=3.7915;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,117,1244	0/0:16,0:16:39.10:0,39,419	0/0:27,0:27:69.15:0,69,728	0/0:25,0:26:60.13:0,60,628	0/0:20,0:20:54.11:0,54,564	1/1:2,32:34:87.28:1145,87,0	1/1:2,33:35:96.31:1263,96,0	0/0:32,0:32:84.20:0,84,890	0/0:30,0:30:81.17:0,81,854	0/0:35,0:35:96.21:0,96,1020	0/0:11,0:11:29.97:0,30,295	0/0:52,0:52:99:0,141,1495	0/0:34,0:34:90.21:0,90,958	0/0:35,0:35:96.24:0,96,1032	0/0:58,0:58:99:0,153,1635	0/0:46,0:45:99:0,120,1289	0/0:29,0:29:81.17:0,81,859	0/0:19,0:19:54.10:0,54,569	0/0:15,0:15:39.09:0,39,413	0/0:11,0:11:30.08:0,30,321	0/0:43,0:43:99:0,108,1122	0/0:15,0:15:42.11:0,42,451	0/0:14,0:14:36.09:0,36,386	0/0:47,0:47:99:0,132,1406	0/0:24,0:24:63.16:0,63,677	0/0:31,0:31:75.19:0,75,806	0/0:26,0:25:69.17:0,69,742	0/0:4,0:4:12.03:0,12,129
chr10	39225738	.	GTT	G	5762.03	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=-14.345;DP=623;FS=15.322;HRun=10;HaplotypeScore=133.9721;InbreedingCoeff=0.7789;MQ=69.67;MQ0=5;MQRankSum=3.415;QD=20.36;ReadPosRankSum=-1.499;VQSLOD=2.0396;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:26.12:0,26,222	1/1:1,18:19:48.13:535,48,0	0/0:25,0:14:20.25:0,20,215	0/0:22,0:17:13.61:0,14,120	1/1:5,24:29:72.18:798,72,0	0/1:8,0:11:8.91:9,0,132	0/0:7,0:13:33.02:0,33,310	0/1:32,0:30:43.94:44,0,270	1/1:2,16:18:45.12:502,45,0	0/1:26,0:26:99:102,0,181	0/0:22,0:22:21.20:0,21,213	1/1:1,19:20:42.11:468,42,0	0/0:17,0:17:51.12:0,51,725	0/0:15,0:15:37.34:0,37,530	1/1:1,22:22:51.13:569,51,0	1/1:1,18:19:41.94:468,42,0	1/1:3,25:28:60.15:669,60,0	0/0:33,0:32:50.50:0,51,237	0/0:27,0:27:27.42:0,27,442	0/0:30,0:30:43:0,43,464	0/0:13,0:13:20.95:0,21,175	1/1:4,16:21:47.77:497,48,0	1/1:1,23:24:66.17:734,66,0	1/1:0,13:13:33.09:368,33,0	0/0:29,0:28:59.36:0,59,450	0/0:26,0:26:21.37:0,21,444	0/0:30,0:30:71.87:0,72,608	0/0:7,0:7:15:0,15,130
chr10	39225740	.	T	TTTTG	11466.72	PASS	AB=1.000;AC=30;AF=0.536;AN=56;BaseQRankSum=-11.027;DP=623;FS=8.638;HRun=0;HaplotypeScore=135.0371;InbreedingCoeff=0.7517;MQ=69.80;MQ0=5;MQRankSum=-3.190;QD=29.25;ReadPosRankSum=-0.970;VQSLOD=4.2348;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,25:31:63.11:1463,63,0	0/0:19,0:19:14.76:0,15,416	0/0:26,0:14:19.06:0,19,230	0/0:22,0:17:14.39:0,14,151	0/1:27,0:27:54.59:55,0,537	0/1:11,0:11:29.19:102,0,29	1/1:15,0:14:6.05:249,6,0	1/1:32,0:30:77.72:653,78,0	0/0:18,0:18:38.07:0,38,430	1/1:1,25:26:72.20:1487,72,0	1/1:2,20:22:51.08:1209,51,0	0/1:20,0:20:0.38:0,0,315	0/0:17,0:17:50.64:0,51,799	0/0:15,0:15:40.66:0,41,644	0/0:23,0:22:45.08:0,45,497	0/0:19,0:19:11.22:0,11,312	0/0:28,0:28:13.54:0,14,495	1/1:2,31:34:57.12:1366,57,0	1/1:26,1:27:74.32:785,74,0	1/1:30,0:30:62.82:676,63,0	1/1:13,0:13:21.06:242,21,0	0/0:20,0:20:42.69:0,43,450	0/0:24,0:24:66.09:0,66,660	0/1:13,0:13:0.38:0,0,266	1/1:1,28:29:60.20:1498,60,0	1/1:25,0:25:74:754,74,0	1/1:28,0:28:49.21:757,49,0	1/1:7,0:7:15.04:170,15,0
chr10	39225741	.	T	TTTG	11193.29	PASS	AB=1.000;AC=27;AF=0.482;AN=56;BaseQRankSum=-6.039;DP=620;FS=21.530;HRun=0;HaplotypeScore=125.6538;InbreedingCoeff=0.9048;MQ=70.39;MQ0=5;MQRankSum=-2.804;QD=33.92;ReadPosRankSum=1.256;VQSLOD=3.5835;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:30,1:31:43.39:776,43,0	0/0:19,0:19:46.32:0,46,433	0/0:27,0:15:19.71:0,20,268	0/0:21,0:16:16.93:0,17,174	0/0:27,0:27:66.94:0,67,608	0/1:11,0:11:26.04:26,0,67	1/1:15,0:14:4.51:107,5,0	1/1:2,28:31:87.18:1350,87,0	0/0:17,0:17:48.03:0,48,446	1/1:24,0:24:29.05:622,29,0	1/1:20,0:20:51.08:627,51,0	0/0:20,0:20:40.30:0,40,370	0/0:17,0:17:50.52:0,51,751	0/0:15,0:15:40.66:0,41,587	0/0:23,0:22:54.08:0,54,511	0/0:19,0:19:44.81:0,45,413	0/0:28,0:28:64.32:0,64,592	1/1:34,0:33:57.11:714,57,0	1/1:2,25:28:78.14:1328,78,0	1/1:0,30:30:63.10:1251,63,0	1/1:1,12:13:21.07:415,21,0	0/0:19,0:19:51.01:0,51,467	0/0:25,0:25:65.98:0,66,621	0/0:13,0:13:31.29:0,31,290	1/1:30,0:29:60.19:776,60,0	1/1:0,25:25:75.24:1434,75,0	1/1:1,27:29:70.48:1450,70,0	1/1:0,7:7:15.05:315,15,0
chr10	39225812	.	TTC	T	1807.90	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.828;DP=646;FS=4.765;HRun=0;HaplotypeScore=84.0905;InbreedingCoeff=0.9984;MQ=85.34;MQ0=3;MQRankSum=-3.233;QD=39.30;ReadPosRankSum=1.084;VQSLOD=5.7361;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:69.24:0,69,1318	0/0:17,0:17:48.16:0,48,910	0/0:19,0:19:57.19:0,57,1067	0/0:21,0:21:63.19:0,63,1170	0/0:20,0:20:60.21:0,60,1159	1/1:0,18:18:51.17:781,51,0	1/1:0,28:28:75.25:1148,75,0	0/0:37,0:37:99:0,102,1930	0/0:21,0:21:60.18:0,60,1124	0/0:23,0:23:66.23:0,66,1255	0/0:11,0:11:24.08:0,24,464	0/0:28,0:28:72.25:0,72,1391	0/0:17,0:17:51.17:0,51,985	0/0:22,0:22:66.23:0,66,1275	0/0:32,0:31:84.29:0,84,1622	0/0:26,0:26:66.23:0,66,1275	0/0:37,0:37:99:0,99,1855	0/0:27,0:26:57.20:0,57,1101	0/0:19,0:19:54.19:0,54,1020	0/0:27,0:27:72.25:0,72,1370	0/0:19,0:19:54.19:0,54,1043	0/0:21,0:21:60.21:0,60,1150	0/0:26,0:26:75.26:0,75,1439	0/0:16,0:16:45.15:0,45,869	0/0:25,0:24:54.19:0,54,1043	0/0:26,0:26:72.25:0,72,1391	0/0:26,0:26:69.22:0,69,1290	0/0:10,0:10:27.09:0,27,511
chr10	39226421	.	T	TG	1142.92	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.416;DP=776;FS=20.812;HRun=1;HaplotypeScore=79.2622;InbreedingCoeff=0.9647;MQ=81.96;MQ0=0;MQRankSum=-7.739;QD=19.71;ReadPosRankSum=-0.561;VQSLOD=2.4269;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,105,1363	0/0:13,0:13:38.98:0,39,465	0/0:30,0:30:84.26:0,84,1074	0/0:23,0:22:66.16:0,66,797	0/0:23,0:23:66.21:0,66,857	1/1:1,1:21:8.98:72,9,0	1/1:2,35:37:81.27:1185,81,0	0/0:31,0:31:87.27:0,87,1118	0/0:24,0:24:69.21:0,69,880	0/0:24,0:24:72.23:0,72,921	0/0:14,0:14:42.12:0,42,530	0/0:40,0:40:99:0,120,1538	0/0:41,0:41:99:0,117,1504	0/0:38,0:38:99:0,111,1429	0/0:43,0:42:99:0,123,1583	0/0:53,0:53:99:0,159,2012	0/0:21,0:21:63.19:0,63,804	0/0:32,0:32:93.25:0,93,1171	0/0:13,0:13:36.12:0,36,465	0/0:22,0:22:63.20:0,63,803	0/0:46,0:46:99:0,135,1736	0/0:18,0:18:54.18:0,54,701	0/0:15,0:15:45.14:0,45,572	0/0:27,0:27:81.26:0,81,1051	0/0:25,0:25:72.23:0,72,934	0/0:34,0:34:99:0,99,1247	0/0:24,0:24:72.23:0,72,933	0/0:6,0:6:18.06:0,18,234
chr10	39227148	.	C	CACTA	3850.77	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-8.126;DP=673;FS=1.148;HRun=0;HaplotypeScore=105.4870;InbreedingCoeff=0.9986;MQ=84.12;MQ0=0;MQRankSum=-5.398;QD=70.01;ReadPosRankSum=-0.193;VQSLOD=5.7377;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,135,2441	0/0:13,0:13:39.12:0,39,680	0/0:22,0:22:65.03:0,65,1137	0/0:18,0:18:47.96:0,48,763	0/0:15,0:15:42.14:0,42,773	1/1:2,20:22:60.21:1543,60,0	1/1:6,27:33:90.31:2308,90,0	0/0:38,0:38:99:0,105,1878	0/0:25,0:25:72.25:0,72,1325	0/0:23,0:23:63.22:0,63,1159	0/0:11,0:11:30.09:0,30,521	0/0:45,0:45:99:0,126,2249	0/0:16,0:16:48.16:0,48,883	0/0:28,0:28:78.27:0,78,1433	0/0:26,0:26:72.25:0,72,1325	0/0:30,0:30:87.28:0,87,1563	0/0:19,0:19:54.16:0,54,960	0/0:22,0:22:57.14:0,57,998	0/0:23,0:23:57.19:0,57,1027	0/0:14,0:14:42.13:0,42,743	0/0:33,0:33:93.19:0,93,1578	0/0:17,0:17:48.16:0,48,883	0/0:9,0:9:27.08:0,27,464	0/0:20,0:20:57.20:0,57,1036	0/0:23,0:23:63.18:0,63,1097	0/0:40,0:40:99:0,114,2066	0/0:26,0:26:66.21:0,66,1182	0/0:9,0:9:27.07:0,27,463
chr10	39227310	.	G	GA	1145.90	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=-5.403;DP=642;FS=3.505;HRun=9;HaplotypeScore=64.8678;InbreedingCoeff=0.7309;MQ=74.24;MQ0=0;MQRankSum=-0.335;QD=16.14;ReadPosRankSum=0.544;VQSLOD=3.8780;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,144,1237	0/0:10,0:10:26.95:0,27,227	0/0:16,0:17:24.18:0,24,233	0/1:12,0:12:9.55:10,0,130	0/0:19,0:20:50.02:0,50,423	1/1:3,21:26:62.84:659,63,0	1/1:8,24:32:34.11:605,34,0	0/0:30,0:30:62.95:0,63,545	0/0:20,0:20:56.96:0,57,490	0/0:34,0:34:92.94:0,93,801	0/0:20,0:21:17.77:0,18,358	0/0:40,0:40:99:0,114,982	0/0:20,0:20:47.97:0,48,417	0/0:21,0:22:62.01:0,62,523	0/0:23,0:25:61.05:0,61,507	0/0:27,0:28:68.01:0,68,579	0/0:23,0:23:65.93:0,66,563	0/0:24,4:28:2.59:0,3,475	0/0:18,0:19:53:0,53,443	0/0:18,0:18:47.97:0,48,413	0/0:22,0:22:62.99:0,63,547	0/0:17,0:17:50.97:0,51,439	0/0:13,0:13:26.98:0,27,234	0/0:23,0:23:68.97:0,69,594	0/0:22,0:22:56.96:0,57,490	0/0:23,1:24:32.39:0,32,484	0/0:16,0:16:38.99:0,39,338	0/0:9,0:9:20.95:0,21,173
chr10	39227863	.	GTT	G	10854	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-2.692;DP=515;FS=2.262;HRun=10;HaplotypeScore=87.0911;InbreedingCoeff=0.9646;MQ=72.61;MQ0=4;MQRankSum=0.476;QD=27.83;ReadPosRankSum=3.349;VQSLOD=5.2389;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,18:19:45.12:502,45,0	1/1:1,3:4:9.02:100,9,0	0/0:36,1:18:27.97:0,28,349	0/0:26,0:18:39.48:0,39,411	1/1:3,18:20:48.04:515,48,0	0/0:4,0:10:26.95:0,27,234	0/0:7,0:13:24.01:0,24,219	1/1:3,24:27:72.19:802,72,0	1/1:2,16:18:36.09:401,36,0	1/1:3,25:28:75.18:822,75,0	1/1:1,23:24:69.18:767,69,0	1/1:2,21:23:54.14:602,54,0	0/0:20,0:20:57.16:0,57,840	0/0:17,0:17:42.13:0,42,645	1/1:1,22:23:60.16:669,60,0	1/1:2,17:19:48.13:535,48,0	1/1:1,24:25:57.15:635,57,0	1/1:0,17:17:51.14:568,51,0	1/1:4,7:11:18.41:220,18,0	1/1:1,15:17:39.03:493,39,0	1/1:2,3:5:6:67,6,0	1/1:0,9:9:27.07:301,27,0	1/1:2,15:17:45.12:502,45,0	1/1:0,19:19:51.05:566,51,0	1/1:1,11:12:27.07:301,27,0	1/1:1,18:19:54.11:583,54,0	1/1:1,18:19:54.15:602,54,0	1/1:3,11:14:27.07:301,27,0
chr10	39228170	.	GT	G	1365.44	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=10.292;DP=753;FS=1.265;HRun=3;HaplotypeScore=79.8895;InbreedingCoeff=0.9984;MQ=88.73;MQ0=0;MQRankSum=-4.845;QD=28.45;ReadPosRankSum=1.852;VQSLOD=3.0409;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,120,1684	0/0:9,0:9:27.09:0,27,389	0/0:30,0:30:82.97:0,83,1082	0/0:26,0:26:75.22:0,75,1036	0/0:32,0:32:96.32:0,96,1382	1/1:1,19:20:48.15:595,48,0	1/1:2,26:28:72.23:892,72,0	0/0:34,0:34:96.25:0,96,1368	0/0:24,0:24:72.23:0,72,1017	0/0:36,0:36:99:0,108,1538	0/0:30,0:30:90.28:0,90,1259	0/0:31,0:31:93.27:0,93,1284	0/0:29,0:29:87.27:0,87,1220	0/0:21,0:21:63.21:0,63,906	0/0:38,0:38:99:0,114,1642	0/0:23,0:23:69.23:0,69,993	0/0:32,0:31:90.24:0,90,1234	0/0:27,0:27:78.26:0,78,1116	0/0:29,0:29:84.25:0,84,1171	0/0:20,0:20:60.20:0,60,859	0/0:39,0:39:99:0,105,1460	0/0:23,0:23:66.22:0,66,950	0/0:23,0:23:69.19:0,69,970	0/0:24,0:24:72.20:0,72,1014	0/0:21,0:21:62.96:0,63,817	0/0:24,0:24:72.24:0,72,1037	0/0:29,0:29:81.26:0,81,1149	0/0:10,0:10:24.08:0,24,345
chr10	39228453	.	GTTCAATGA	G	3648.21	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=10.549;DP=870;FS=1.211;HRun=0;HaplotypeScore=212.9120;InbreedingCoeff=0.9999;MQ=90.33;MQ0=0;MQRankSum=-10.896;QD=66.33;ReadPosRankSum=-0.744;VQSLOD=3.5326;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,147,5874	0/0:16,0:16:48.16:0,48,2165	0/0:40,0:40:99:0,116,4639	0/0:28,0:28:83.50:0,83,3152	0/0:29,0:29:87.30:0,87,3791	1/1:1,31:32:78.27:2203,78,0	1/1:0,23:23:51.18:1445,51,0	0/0:43,0:43:99:0,126,5271	0/0:34,0:34:99:0,102,4488	0/0:28,0:28:84.28:0,84,3619	0/0:25,0:25:75.26:0,75,3296	0/0:40,0:40:99:0,120,5272	0/0:40,0:40:99:0,120,5221	0/0:33,0:33:99:0,99,4287	0/0:43,0:43:99:0,129,5787	0/0:32,0:32:96.32:0,96,4205	0/0:17,0:17:51.18:0,51,2283	0/0:41,0:41:99:0,120,5112	0/0:21,0:21:63.22:0,63,2637	0/0:32,0:32:96.33:0,96,4270	0/0:35,0:35:96.33:0,96,4077	0/0:32,0:32:96.30:0,96,4028	0/0:27,0:27:81.28:0,81,3592	0/0:24,0:24:72.25:0,72,3085	0/0:25,0:25:75.25:0,75,3243	0/0:28,0:28:84.28:0,84,3641	0/0:41,0:41:99:0,123,5290	0/0:12,0:12:36.12:0,36,1454
chr10	39228818	.	C	CCTCTGACTCCCGTGTTG	9007.78	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-3.931;DP=800;FS=7.701;HRun=0;HaplotypeScore=374.0875;InbreedingCoeff=0.9987;MQ=79.61;MQ0=0;MQRankSum=-10.485;QD=166.81;ReadPosRankSum=-0.605;VQSLOD=3.8891;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,141,6425	0/0:11,0:11:30.10:0,30,1405	0/0:22,0:22:55.26:0,55,1929	0/0:18,0:18:43.70:0,44,1356	0/0:26,0:26:75.26:0,75,3480	1/1:18,13:36:90.31:5980,90,0	1/1:14,3:18:45.15:3028,45,0	0/0:29,0:29:84.27:0,84,3344	0/0:26,0:26:78.27:0,78,3660	0/0:34,0:34:99:0,99,4325	0/0:17,0:17:51.16:0,51,2233	0/0:44,0:44:99:0,132,5843	0/0:36,0:36:99:0,108,4705	0/0:30,0:30:90.30:0,90,4021	0/0:47,0:47:99:0,135,5696	0/0:35,0:35:99:0,105,4745	0/0:34,0:34:90.29:0,90,3922	0/0:35,0:35:99:0,102,4594	0/0:21,0:21:63.19:0,63,2700	0/0:20,0:20:54.17:0,54,2225	0/0:33,0:33:96.31:0,96,4202	0/0:33,0:33:99:0,99,4514	0/0:23,0:23:69.24:0,69,3061	0/0:32,0:32:93.31:0,93,4217	0/0:25,0:25:75.26:0,75,3594	0/0:30,0:30:90.30:0,90,3928	0/0:30,0:30:87.30:0,87,4106	0/0:8,0:8:24.03:0,24,908
chr10	39228922	.	C	CTG	3163.24	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=2.872;DP=743;FS=6.908;HRun=0;HaplotypeScore=98.7027;InbreedingCoeff=0.9993;MQ=85.06;MQ0=0;MQRankSum=-4.260;QD=51.02;ReadPosRankSum=0.368;VQSLOD=4.0717;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:96.33:0,96,1565	0/0:13,0:13:36.12:0,36,587	0/0:28,0:28:78.25:0,78,1206	0/0:21,0:21:54.16:0,54,829	0/0:19,0:19:54.15:0,54,831	1/1:1,29:30:81.28:1642,81,0	1/1:2,29:32:81.28:1643,81,0	0/0:27,0:27:75.20:0,75,1151	0/0:26,0:26:78.27:0,78,1272	0/0:24,0:24:72.23:0,72,1111	0/0:10,0:10:27.09:0,27,439	0/0:37,0:37:99:0,108,1754	0/0:28,0:28:78.27:0,78,1272	0/0:36,0:36:99:0,108,1758	0/0:44,0:43:99:0,132,2153	0/0:32,0:32:96.30:0,96,1514	0/0:16,0:16:48.15:0,48,758	0/0:26,0:26:75.22:0,75,1196	0/0:17,0:17:48.13:0,48,697	0/0:23,0:23:69.21:0,69,1078	0/0:55,0:55:99:0,160,2545	0/0:21,0:21:63.22:0,63,1028	0/0:16,0:16:48.11:0,48,728	0/0:32,0:32:93.25:0,93,1418	0/0:20,0:20:60.20:0,60,976	0/0:30,0:30:87.29:0,87,1396	0/0:35,0:35:99:0,105,1681	0/0:12,0:12:36.12:0,36,587
chr10	39229218	.	AGAGG	A	526.89	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.645;DP=699;FS=0.000;HRun=0;HaplotypeScore=106.3974;InbreedingCoeff=0.9822;MQ=56.42;MQ0=12;MQRankSum=-3.288;QD=21.08;ReadPosRankSum=-1.993;VQSLOD=3.0242;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,108,2848	0/0:7,0:7:21.07:0,21,554	0/0:30,0:8:23.44:0,23,542	0/0:32,0:15:45.15:0,45,1124	0/0:25,0:25:72.25:0,72,1879	1/1:3,8:11:21.07:368,21,0	1/1:2,12:12:15.05:276,15,0	0/0:40,0:40:99:0,99,2553	0/0:7,0:7:21.07:0,21,555	0/0:31,0:31:93.32:0,93,2429	0/0:17,0:17:45.15:0,45,1177	0/0:26,0:26:72.25:0,72,1900	0/0:28,0:28:81.28:0,81,2137	0/0:26,0:26:75.26:0,75,1968	0/0:26,0:26:69.24:0,69,1781	0/0:42,0:42:99:0,117,3045	0/0:30,0:30:81.28:0,81,2103	0/0:42,0:42:99:0,114,3011	0/0:28,0:28:81.28:0,81,2128	0/0:21,0:21:60.21:0,60,1562	0/0:31,0:31:90.31:0,90,2345	0/0:20,0:20:57.20:0,57,1502	0/0:18,0:18:51.18:0,51,1324	0/0:26,0:26:75.26:0,75,1929	0/0:20,0:20:57.20:0,57,1485	0/0:29,0:29:75.26:0,75,1981	0/0:27,0:26:78.27:0,78,2054	0/0:7,0:7:21.07:0,21,555
chr10	39229358	.	AAAAG	A	1435.42	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.776;DP=680;FS=9.429;HRun=0;HaplotypeScore=114.6975;InbreedingCoeff=0.9630;MQ=76.69;MQ0=0;MQRankSum=-3.173;QD=46.30;ReadPosRankSum=-0.100;VQSLOD=3.6842;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,135,3775	0/0:3,0:3:9.03:0,9,252	0/0:15,0:15:42.06:0,42,918	0/0:17,0:17:39.17:0,39,1118	0/0:24,0:24:69.24:0,69,1894	1/1:0,15:15:42.14:838,42,0	1/1:0,16:16:36.12:719,36,0	0/0:34,0:34:96.32:0,96,2600	0/0:27,0:27:78.27:0,78,2180	0/0:29,0:29:87.30:0,87,2388	0/0:15,0:15:42.14:0,42,1155	0/0:31,0:31:87.30:0,87,2418	0/0:35,0:35:99:0,105,2919	0/0:24,0:24:69.24:0,69,1905	0/0:36,0:36:99:0,105,2919	0/0:39,0:39:99:0,117,3179	0/0:34,0:33:99:0,102,2826	0/0:20,0:20:60.21:0,60,1675	0/0:29,0:29:87.28:0,87,2289	0/0:28,0:28:81.28:0,81,2247	0/0:20,0:20:60.21:0,60,1649	0/0:18,0:18:54.17:0,54,1450	0/0:20,0:20:60.21:0,60,1637	0/0:20,0:20:60.21:0,60,1678	0/0:19,0:19:57.20:0,57,1559	0/0:36,0:36:99:0,108,2935	0/0:26,0:26:78.27:0,78,2097	0/0:5,0:5:15.05:0,15,420
chr10	39229521	.	TGAG	T	1910.78	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.339;DP=769;FS=0.588;HRun=0;HaplotypeScore=120.6009;InbreedingCoeff=0.9880;MQ=81.79;MQ0=0;MQRankSum=-3.049;QD=38.22;ReadPosRankSum=0.096;VQSLOD=4.5400;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,147,2979	0/0:5,0:5:15.02:0,15,276	0/0:21,0:21:47.02:0,47,958	0/0:20,0:21:18.39:0,18,600	0/0:24,0:24:72.25:0,72,1621	1/1:1,18:19:45.15:748,45,0	1/1:1,30:31:78.27:1284,78,0	0/0:31,0:31:81.25:0,81,1661	0/0:30,0:30:87.30:0,87,1906	0/0:24,0:24:72.25:0,72,1620	0/0:18,0:18:51.18:0,51,1152	0/0:40,0:40:99:0,111,2509	0/0:28,0:28:81.23:0,81,1766	0/0:24,0:24:72.22:0,72,1527	0/0:42,0:42:99:0,123,2702	0/0:25,0:25:69.24:0,69,1504	0/0:40,0:40:99:0,117,2605	0/0:33,0:33:96.28:0,96,2062	0/0:27,0:27:69.23:0,69,1467	0/0:23,0:23:66.23:0,66,1494	0/0:54,0:54:99:0,156,3315	0/0:15,0:15:42.13:0,42,891	0/0:18,0:18:54.19:0,54,1195	0/0:26,0:26:75.25:0,75,1615	0/0:19,0:19:54.19:0,54,1203	0/0:40,0:40:99:0,120,2617	0/0:22,0:21:66.20:0,66,1352	0/0:18,0:18:54.19:0,54,1223
chr10	39230449	.	T	TATC	2504.31	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-8.042;DP=645;FS=1.317;HRun=0;HaplotypeScore=91.3221;InbreedingCoeff=0.9991;MQ=82.28;MQ0=0;MQRankSum=-3.721;QD=54.44;ReadPosRankSum=1.035;VQSLOD=5.4347;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:78.24:0,78,1277	0/0:9,0:9:27.09:0,27,457	0/0:19,0:19:54.12:0,54,829	0/0:16,0:16:42.11:0,42,660	0/0:15,0:15:42.11:0,42,686	1/1:2,21:25:63.22:1451,63,0	1/1:3,18:21:51.18:1175,51,0	0/0:27,0:27:81.28:0,81,1371	0/0:18,0:18:51.17:0,51,870	0/0:34,0:34:93.32:0,93,1574	0/0:16,0:16:45.15:0,45,767	0/0:28,0:28:81.24:0,81,1303	0/0:27,0:27:78.27:0,78,1330	0/0:21,0:21:60.21:0,60,1023	0/0:35,0:35:99:0,105,1712	0/0:36,0:36:99:0,108,1816	0/0:34,0:34:99:0,102,1678	0/0:21,0:21:63.22:0,63,1064	0/0:18,0:18:51.15:0,51,830	0/0:21,0:21:63.20:0,63,1048	0/0:33,0:33:99:0,99,1679	0/0:19,0:19:54.17:0,54,895	0/0:15,0:15:42.14:0,42,716	0/0:24,0:24:66.23:0,66,1126	0/0:14,0:14:39.12:0,39,639	0/0:28,0:28:78.26:0,78,1306	0/0:33,0:33:90.31:0,90,1531	0/0:11,0:11:30.10:0,30,504
chr10	39230638	.	T	TC	1735.55	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-8.745;DP=763;FS=1.957;HRun=2;HaplotypeScore=71.7304;InbreedingCoeff=0.9989;MQ=87.48;MQ0=1;MQRankSum=-3.820;QD=33.38;ReadPosRankSum=-2.054;VQSLOD=3.0573;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,117,1438	0/0:17,0:17:51.16:0,51,632	0/0:31,0:30:81.25:0,81,1002	0/0:25,0:25:67.87:0,68,774	0/0:31,0:31:93.29:0,93,1153	1/1:1,21:22:57.19:820,57,0	1/1:4,26:30:72.24:1037,72,0	0/0:31,0:31:90.26:0,90,1093	0/0:19,0:19:54.17:0,54,669	0/0:30,0:30:84.26:0,84,1042	0/0:22,0:22:66.21:0,66,818	0/0:23,0:23:69.22:0,69,854	0/0:31,0:31:93.28:0,93,1140	0/0:22,0:22:66.19:0,66,804	0/0:32,0:32:93.28:0,93,1141	0/0:33,0:33:96.29:0,96,1178	0/0:31,0:31:90.28:0,90,1115	0/0:20,0:20:57.16:0,57,693	0/0:26,0:26:72.22:0,72,882	0/0:32,0:32:93.29:0,93,1153	0/0:29,0:29:81.21:0,81,975	0/0:24,0:24:72.23:0,72,891	0/0:33,0:33:99:0,99,1227	0/0:27,0:27:81.25:0,81,1004	0/0:29,0:29:87.26:0,87,1065	0/0:29,0:29:84.26:0,84,1041	0/0:34,0:34:99:0,99,1227	0/0:8,0:8:24.08:0,24,296
chr10	39230942	.	GCA	G	2246.58	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=11.681;DP=808;FS=10.440;HRun=0;HaplotypeScore=98.1689;InbreedingCoeff=0.9999;MQ=74.95;MQ0=1;MQRankSum=-2.247;QD=36.83;ReadPosRankSum=1.203;VQSLOD=5.4761;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,148,2746	0/0:16,0:16:48.16:0,48,899	0/0:15,0:15:45.15:0,45,835	0/0:15,0:15:36.03:0,36,597	0/0:27,0:27:81.28:0,81,1505	1/1:0,18:18:51.17:743,51,0	1/1:1,42:43:99:1626,111,0	0/0:27,0:27:81.28:0,81,1489	0/0:21,0:21:60.17:0,60,1052	0/0:39,0:39:99:0,117,2193	0/0:21,0:21:59.66:0,60,1116	0/0:37,0:37:99:0,105,1967	0/0:25,0:24:69.24:0,69,1261	0/0:26,0:26:78.27:0,78,1461	0/0:42,0:42:99:0,123,2303	0/0:45,0:45:99:0,135,2512	0/0:37,0:37:99:0,105,1936	0/0:25,0:25:72.25:0,72,1332	0/0:22,0:22:63.19:0,63,1133	0/0:25,0:25:75.26:0,75,1397	0/0:55,0:55:99:0,166,3031	0/0:20,0:20:60.21:0,60,1124	0/0:22,0:22:66.23:0,66,1236	0/0:50,0:50:99:0,148,2730	0/0:19,0:19:57.20:0,57,1068	0/0:32,0:32:93.32:0,93,1739	0/0:19,0:19:54.19:0,54,1010	0/0:14,0:14:42.14:0,42,786
chr10	39232400	.	CA	C	2393.56	PASS	AB=0.952;AC=11;AF=0.196;AN=56;BaseQRankSum=8.282;DP=727;FS=5.064;HRun=12;HaplotypeScore=85.8506;InbreedingCoeff=0.8103;MQ=67.41;MQ0=1;MQRankSum=1.649;QD=14.51;ReadPosRankSum=4.003;VQSLOD=4.3625;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,38:42:99:788,101,0	0/0:4,0:4:6:0,6,56	0/1:19,1:17:42.37:42,0,122	0/0:18,0:13:18.02:0,18,176	0/0:24,0:27:62.75:0,63,590	0/0:7,0:16:30.72:0,31,157	0/0:12,0:27:44.81:0,45,211	0/0:32,0:36:92.84:0,93,871	0/0:27,0:27:49.21:0,49,657	1/1:6,25:31:74.66:575,75,0	1/1:4,10:15:1.51:184,2,0	0/0:32,2:34:40.61:0,41,728	0/0:27,0:27:36.96:0,37,526	0/0:32,0:32:68.99:0,69,658	0/0:27,0:28:39.70:0,40,551	0/0:38,0:38:99:0,102,1007	0/0:31,0:31:87.12:0,87,857	1/1:4,29:33:74.67:580,75,0	0/0:32,0:33:62.83:0,63,582	0/0:11,0:13:21.94:0,22,224	0/0:32,1:36:33.70:0,34,664	0/0:24,0:24:30.92:0,31,484	0/0:24,0:26:68.97:0,69,683	0/0:21,0:21:54.09:0,54,537	1/1:3,20:24:28.38:393,28,0	0/0:24,1:25:36.89:0,37,555	0/0:31,0:30:87.10:0,87,858	0/0:7,0:8:17.84:0,18,154
chr10	39232852	.	A	AG	2033.87	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-6.680;DP=894;FS=2.531;HRun=1;HaplotypeScore=84.9988;InbreedingCoeff=0.9997;MQ=84.65;MQ0=0;MQRankSum=-1.880;QD=37.66;ReadPosRankSum=-0.528;VQSLOD=3.7790;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,153,1986	0/0:10,0:10:30.10:0,30,389	0/0:26,0:27:73.18:0,73,838	0/0:29,0:29:69.96:0,70,901	0/0:30,0:30:90.29:0,90,1167	1/1:0,22:22:66.22:987,66,0	1/1:1,31:32:78.11:1168,78,0	0/0:54,0:54:99:0,153,1917	0/0:29,0:29:81.25:0,81,1036	0/0:30,0:30:84.27:0,84,1090	0/0:15,0:15:45.15:0,45,580	0/0:39,0:39:99:0,111,1441	0/0:33,0:33:96.31:0,96,1246	0/0:50,0:50:99:0,144,1854	0/0:54,0:54:99:0,156,2011	0/0:30,0:30:87.28:0,87,1130	0/0:40,0:40:99:0,120,1540	0/0:27,0:27:81.20:0,81,1015	0/0:27,0:27:78.25:0,78,1012	0/0:21,0:21:63.20:0,63,818	0/0:60,0:60:99:0,181,2334	0/0:26,0:26:78.25:0,78,1009	0/0:25,0:25:69.21:0,69,877	0/0:32,0:32:93.30:0,93,1207	0/0:25,0:25:69.22:0,69,895	0/0:35,0:34:99:0,105,1350	0/0:25,0:25:72.23:0,72,933	0/0:14,0:14:36.12:0,36,467
chr10	39233782	.	T	TC	1642.71	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-9.579;DP=766;FS=1.236;HRun=3;HaplotypeScore=69.7376;InbreedingCoeff=0.9646;MQ=82.85;MQ0=0;MQRankSum=0.826;QD=31.59;ReadPosRankSum=1.186;VQSLOD=3.7315;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,132,1570	0/0:6,0:6:18.06:0,18,216	0/0:27,0:27:71.92:0,72,848	0/0:20,0:20:41.70:0,42,650	0/0:17,0:17:51.16:0,51,612	1/1:0,27:27:72.24:1008,72,0	1/1:3,22:25:54.18:756,54,0	0/0:31,0:31:84.26:0,84,1008	0/0:39,0:39:99:0,117,1404	0/0:24,0:24:66.20:0,66,792	0/0:7,0:7:21.06:0,21,252	0/0:41,0:41:99:0,114,1342	0/0:26,0:26:78.23:0,78,923	0/0:28,0:28:84.21:0,84,971	0/0:44,0:44:99:0,126,1500	0/0:40,0:40:99:0,120,1440	0/0:42,0:42:99:0,120,1412	0/0:14,0:14:39.12:0,39,468	0/0:21,0:21:57.17:0,57,684	0/0:22,0:22:63.17:0,63,733	0/0:67,0:67:99:0,187,2231	0/0:14,0:14:39.09:0,39,445	0/0:18,0:18:51.16:0,51,612	0/0:44,0:44:99:0,132,1545	0/0:17,0:17:51.14:0,51,600	0/0:24,0:24:66.20:0,66,792	0/0:26,0:26:78.24:0,78,933	0/0:6,0:6:8.99:0,9,92
chr10	39234306	.	GCTC	G	5276.38	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=10.307;DP=648;FS=0.816;HRun=0;HaplotypeScore=104.7616;InbreedingCoeff=0.9932;MQ=84.82;MQ0=0;MQRankSum=-2.919;QD=43.61;ReadPosRankSum=1.315;VQSLOD=6.4902;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,36:37:84.29:1467,84,0	0/0:11,0:11:33.11:0,33,779	0/0:23,0:23:66.19:0,66,1412	0/0:20,0:20:53.17:0,53,1185	0/0:17,0:17:51.17:0,51,1180	0/0:21,0:21:60.17:0,60,880	0/0:29,0:29:87.30:0,87,1327	0/0:32,0:32:96.33:0,96,2228	0/0:24,0:24:72.23:0,72,1655	1/1:0,17:17:48.16:827,48,0	1/1:0,12:12:18.06:316,18,0	0/0:39,0:39:99:0,117,2746	1/1:0,18:18:51.17:899,51,0	1/1:0,13:13:36.12:635,36,0	0/0:35,0:35:99:0,105,2479	0/0:30,0:30:90.31:0,90,2073	0/0:35,0:35:99:0,102,2366	1/1:1,23:24:66.18:1132,66,0	0/0:17,0:17:51.18:0,51,1181	0/0:13,0:13:39.13:0,39,922	0/0:50,0:50:99:0,151,3534	0/0:23,0:23:69.24:0,69,1626	0/0:13,0:13:39.13:0,39,907	0/0:20,0:20:60.21:0,60,1413	0/0:19,0:19:54.19:0,54,1277	0/0:22,1:23:13.78:0,14,1433	0/0:26,0:26:78.27:0,78,1811	0/0:7,0:7:21.07:0,21,492
chr10	39235648	.	GA	G	1588.67	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=10.996;DP=779;FS=8.963;HRun=3;HaplotypeScore=84.1433;InbreedingCoeff=0.9938;MQ=81.45;MQ0=0;MQRankSum=-1.602;QD=31.15;ReadPosRankSum=-0.529;VQSLOD=2.7465;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,159,2207	0/0:7,0:7:21.04:0,21,275	0/0:20,0:20:60.20:0,60,835	0/0:33,0:33:90.26:0,90,1257	0/0:27,0:27:75.24:0,75,1062	1/1:0,18:18:45.14:558,45,0	1/1:1,32:33:93.29:1153,93,0	0/0:33,0:33:99:0,99,1393	0/0:29,0:29:87.29:0,87,1237	0/0:27,0:27:81.27:0,81,1165	0/0:19,0:19:57.19:0,57,820	0/0:40,0:40:99:0,111,1547	0/0:34,0:34:99:0,102,1433	0/0:26,0:26:69.23:0,69,979	0/0:40,0:40:99:0,120,1696	0/0:39,0:39:99:0,114,1641	0/0:33,0:33:99:0,99,1404	0/0:30,0:30:84.20:0,84,1147	0/0:18,0:18:54.16:0,54,758	0/0:22,0:22:66.20:0,66,914	0/0:44,0:44:99:0,129,1856	0/0:16,0:16:48.15:0,48,675	0/0:22,0:22:60.20:0,60,864	0/0:27,0:27:78.21:0,78,1084	0/0:20,0:20:54.18:0,54,777	0/0:29,0:29:84.28:0,84,1210	0/0:33,0:33:93.30:0,93,1321	0/0:6,0:6:18.06:0,18,259
chr10	39236026	.	A	ACAGGCAGG	5790.11	PASS	AC=32;AF=0.615;AN=52;BaseQRankSum=-8.925;DP=661;FS=12.540;HRun=0;HaplotypeScore=194.2095;InbreedingCoeff=0.8019;MQ=63.39;MQ0=1;MQRankSum=-1.064;QD=13.95;ReadPosRankSum=-3.688;VQSLOD=2.0339;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:21.89:0,22,259	1/1:5,7:13:5.54:246,6,0	0/0:17,0:12:15.03:0,15,244	0/0:24,0:23:20.93:0,21,314	1/1:12,3:16:8.95:94,9,0	0/0:14,0:15:3.01:0,3,49	./.	1/1:18,0:18:16.30:299,16,0	1/1:10,17:30:17.87:602,18,0	0/0:25,0:25:39.09:0,39,626	0/0:15,0:15:5.98:0,6,76	1/1:13,22:41:14.79:505,15,0	0/0:25,0:25:48.13:0,48,683	0/0:21,0:21:17.89:0,18,160	1/1:14,13:33:15.05:470,15,0	1/1:12,24:42:21.07:717,21,0	1/1:14,21:37:9.03:372,9,0	0/0:17,0:17:24.06:0,24,341	1/1:14,6:21:26.92:494,27,0	1/1:7,4:12:3.01:40,3,0	1/1:54,0:53:26.39:646,26,0	1/1:6,8:15:5.60:247,6,0	1/1:11,4:16:3.01:71,3,0	1/1:11,17:30:9.03:297,9,0	0/0:19,0:19:30.05:0,30,526	1/1:15,3:22:21.07:616,21,0	1/1:4,7:14:3.01:73,3,0	./.
chr10	39236029	.	GGC	G	267.27	PASS	AB=0.823;AC=6;AF=0.107;AN=56;BaseQRankSum=8.048;DP=647;FS=19.510;HRun=0;HaplotypeScore=146.8901;InbreedingCoeff=-0.1246;MQ=62.65;MQ0=1;MQRankSum=-6.347;QD=1.82;ReadPosRankSum=3.628;VQSLOD=1.0237;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:38,11:49:5.88:6,0,532	0/0:14,0:14:24.76:0,25,377	0/0:17,0:12:36.12:0,36,594	0/0:24,0:23:63.17:0,63,927	0/0:17,0:17:42.13:0,42,669	0/1:14,0:14:25.19:25,0,56	0/0:14,0:14:20.93:0,21,173	0/0:18,0:18:53.16:0,53,805	0/0:29,0:29:42.04:0,42,648	0/1:15,10:25:99:144,0,198	0/0:8,5:13:16.93:0,17,204	0/0:40,0:40:45.05:0,45,704	0/1:8,15:23:99:119,0,164	0/0:13,6:19:6.38:0,6,236	0/0:33,0:33:51.15:0,51,776	0/0:43,0:43:60.20:0,60,924	0/0:36,0:36:39.09:0,39,621	0/1:12,4:16:82.80:83,0,155	0/0:22,0:21:62.80:0,63,972	0/0:12,0:12:23.82:0,24,330	0/0:55,0:54:99:0,110,1785	0/0:15,0:15:23.72:0,24,345	0/0:16,0:16:32.99:0,33,496	0/0:29,0:29:38.56:0,39,522	0/1:20,0:20:8.37:8,0,279	0/0:20,0:20:60.19:0,60,999	0/0:12,0:12:9.03:0,9,145	0/0:2,0:2:6.02:0,6,103
chr10	39236032	.	AGGCAGGCAGG	A	3717.08	PASS	AB=0.761;AC=7;AF=0.125;AN=56;BaseQRankSum=10.094;DP=627;FS=4.300;HRun=0;HaplotypeScore=197.5064;InbreedingCoeff=-0.1161;MQ=59.42;MQ0=2;MQRankSum=-9.534;QD=25.46;ReadPosRankSum=8.526;VQSLOD=1.9081;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:34,11:45:99:574,0,412	0/0:13,0:13:18.74:0,19,595	0/0:17,0:10:30.10:0,30,1008	0/0:22,0:21:57.19:0,57,1591	0/0:15,0:15:36.12:0,36,874	0/1:12,0:12:35.71:60,0,36	0/0:13,0:13:9.20:0,9,81	0/0:16,0:16:48.15:0,48,1307	0/0:30,0:30:48.09:0,48,1484	0/1:15,10:25:90.61:918,0,91	0/1:8,5:13:99:247,0,113	0/0:41,0:42:50.77:0,51,1462	0/1:7,15:22:8.20:995,0,8	0/1:10,6:16:70.69:381,0,71	0/0:31,0:31:48.16:0,48,1424	0/0:41,0:41:54.63:0,55,1508	0/0:37,0:37:45.15:0,45,1328	0/1:9,4:13:42.59:542,0,43	0/0:23,0:21:63.22:0,63,1971	0/0:12,0:12:24.08:0,24,494	0/0:54,0:53:99:0,107,3090	0/0:16,0:16:26.68:0,27,664	0/0:18,0:18:39.60:0,40,758	0/0:29,0:29:39.12:0,39,1133	0/0:18,0:18:45.08:0,45,1396	0/0:20,0:20:60.19:0,60,2109	0/0:12,0:12:9.03:0,9,240	0/0:2,0:2:6.02:0,6,152
chr10	39236569	.	GT	G	1532.75	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=11.386;DP=872;FS=9.960;HRun=4;HaplotypeScore=88.4933;InbreedingCoeff=0.9994;MQ=76.04;MQ0=0;MQRankSum=-0.392;QD=30.05;ReadPosRankSum=0.322;VQSLOD=3.0784;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:59,0:59:99:0,171,2332	0/0:15,0:15:45.12:0,45,610	0/0:25,0:25:65.03:0,65,877	0/0:27,1:28:42.91:0,43,995	0/0:25,0:25:72.22:0,72,985	1/1:0,24:24:69.21:827,69,0	1/1:2,25:27:69.21:828,69,0	0/0:37,0:37:99:0,102,1415	0/0:38,0:38:99:0,111,1554	0/0:43,0:43:99:0,129,1772	0/0:22,0:22:60.20:0,60,840	0/0:39,0:39:99:0,108,1495	0/0:41,0:41:99:0,120,1677	0/0:40,0:40:99:0,114,1574	0/0:50,0:50:99:0,144,1991	0/0:39,0:39:99:0,117,1609	0/0:37,0:37:99:0,108,1492	0/0:27,0:27:75.25:0,75,1050	0/0:26,0:26:75.24:0,75,1034	0/0:21,0:21:63.21:0,63,877	0/0:46,0:46:99:0,132,1845	0/0:21,0:21:60.20:0,60,840	0/0:25,0:25:75.24:0,75,1033	0/0:32,0:32:96.32:0,96,1340	0/0:28,0:28:81.27:0,81,1133	0/0:30,0:30:87.28:0,87,1202	0/0:18,0:18:48.16:0,48,672	0/0:9,0:9:27.09:0,27,378
chr10	39236703	.	GGT	G	13703.12	PASS	AB=0.966;AC=53;AF=0.946;AN=56;BaseQRankSum=-2.424;DP=747;FS=2.103;HRun=0;HaplotypeScore=133.2001;InbreedingCoeff=0.5269;MQ=69.29;MQ0=0;MQRankSum=-4.131;QD=18.93;ReadPosRankSum=5.685;VQSLOD=4.6701;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:44,0:44:2.99:110,3,0	1/1:3,13:16:39.12:487,39,0	0/1:27,1:27:21.63:22,0,529	0/0:23,0:23:45.21:0,45,634	1/1:2,13:15:32.68:412,33,0	1/1:20,0:20:22.34:209,22,0	1/1:30,0:30:23.60:284,24,0	1/1:13,14:27:24.10:452,24,0	1/1:3,23:26:63.20:788,63,0	1/1:30,0:30:15.78:67,16,0	1/1:22,0:22:9.64:53,10,0	1/1:3,43:47:99:1269,105,0	1/1:28,0:28:40.16:113,40,0	1/1:35,0:35:41.98:112,42,0	1/1:3,32:35:78.25:976,78,0	1/1:2,30:32:87.28:1088,87,0	1/1:4,33:37:84.27:1051,84,0	1/1:24,0:24:15.43:31,15,0	1/1:5,14:19:42.09:495,42,0	1/1:0,15:15:45.10:545,45,0	1/1:12,39:51:99:1314,105,0	1/1:5,17:22:39.03:466,39,0	1/1:5,14:19:39.07:487,39,0	1/1:5,30:35:87.28:1088,87,0	1/1:6,13:19:36.11:426,36,0	1/1:5,18:24:54.83:610,55,0	1/1:3,15:18:48.15:600,48,0	1/1:1,5:6:9.28:146,9,0
chr10	39236714	.	GT	G	2864.65	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-7.936;DP=707;FS=5.126;HRun=1;HaplotypeScore=153.6153;InbreedingCoeff=0.8463;MQ=68.89;MQ0=5;MQRankSum=0.197;QD=27.54;ReadPosRankSum=0.265;VQSLOD=3.2802;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,29:33:65.25:1064,65,0	0/0:16,0:16:6.96:0,7,19	0/0:22,0:21:49.71:0,50,787	0/0:24,0:24:71.59:0,72,1006	0/0:18,0:19:20.23:0,20,206	0/0:20,0:20:47.83:0,48,399	0/0:36,0:36:71.76:0,72,622	0/0:18,0:18:29.25:0,29,221	0/0:27,0:27:21.90:0,22,153	1/1:1,23:22:54.52:651,55,0	1/1:0,21:21:48.13:586,48,0	0/0:44,0:44:16.55:0,17,62	0/0:28,0:29:33.33:0,33,148	0/0:32,0:31:63.85:0,64,247	0/0:35,0:35:21.26:0,21,125	0/0:30,0:30:13.67:0,14,41	0/0:35,0:35:19.20:0,19,102	1/1:1,24:23:57.12:722,57,0	0/0:16,0:16:17.87:0,18,126	0/0:15,0:15:9.50:0,10,36	0/0:44,0:44:28.53:0,29,200	0/0:20,1:21:15.07:0,15,115	0/0:19,0:19:15.55:0,16,118	0/0:32,1:33:22.70:0,23,153	0/0:17,0:17:17.96:0,18,75	0/0:26,1:27:1.84:0,2,317	0/0:18,0:18:13.55:0,14,85	0/0:6,0:6:4.05:0,4,34
chr10	39236716	.	GT	G	7039.63	PASS	AB=0.980;AC=39;AF=0.696;AN=56;BaseQRankSum=1.473;DP=706;FS=2.655;HRun=1;HaplotypeScore=137.0695;InbreedingCoeff=0.1972;MQ=68.58;MQ0=5;MQRankSum=-3.004;QD=11.66;ReadPosRankSum=11.017;VQSLOD=2.0347;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:33,1:33:76.40:1056,76,0	1/1:14,1:15:28.86:90,29,0	0/0:20,0:19:41.87:0,42,618	0/0:24,0:24:71.53:0,72,864	0/1:19,0:19:36.66:37,0,112	0/0:22,0:22:46.07:0,46,250	0/0:36,0:36:66.15:0,66,359	0/1:17,0:17:40.70:100,0,41	0/1:28,0:28:55.10:87,0,55	1/1:24,0:22:54.08:642,54,0	1/1:21,1:22:50.71:614,51,0	1/1:45,0:45:48.98:215,49,0	1/1:1,27:28:75.18:1022,75,0	1/1:0,31:30:81.27:1131,81,0	1/1:34,0:34:3.33:119,3,0	1/1:30,0:30:64.39:201,64,0	1/1:36,0:36:7.77:133,8,0	1/1:25,0:23:57.11:717,57,0	1/1:15,0:15:5.37:98,5,0	1/1:15,0:15:34.05:117,34,0	0/1:46,0:46:48.61:149,0,49	0/1:20,1:21:36.52:47,0,37	0/1:18,1:19:45.07:52,0,45	0/1:32,1:33:16.17:127,0,16	1/1:17,0:17:21.80:59,22,0	0/1:26,0:26:99:121,0,125	0/1:17,1:18:18.88:69,0,19	1/1:6,0:6:11.25:36,11,0
chr10	39236717	.	TGG	T	4748.05	PASS	AB=1.000;AC=30;AF=0.536;AN=56;BaseQRankSum=-6.851;DP=709;FS=0.631;HRun=6;HaplotypeScore=157.2357;InbreedingCoeff=0.2675;MQ=68.69;MQ0=5;MQRankSum=-2.892;QD=9.46;ReadPosRankSum=7.740;VQSLOD=0.2726;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:32:65.47:0,65,722	1/1:16,0:16:12.72:148,13,0	0/0:18,1:18:3.75:0,4,608	0/0:23,0:23:64.34:0,64,777	0/1:19,0:19:84.62:85,0,87	1/1:1,21:22:45.15:599,45,0	1/1:0,35:35:63.21:838,63,0	0/1:17,0:17:22.46:80,0,22	0/1:28,0:28:59.72:164,0,60	0/0:24,0:22:50.03:0,50,412	0/0:22,0:22:42.22:0,42,397	1/1:45,0:45:57.45:348,57,0	0/0:28,0:28:74.22:0,74,577	0/0:32,0:31:83.85:0,84,682	1/1:34,0:34:21.74:222,22,0	1/1:30,0:30:77.99:311,78,0	1/1:36,0:36:11.42:229,11,0	0/0:26,0:24:59.94:0,60,510	0/1:17,0:17:42.02:89,0,42	1/1:15,0:15:38.77:175,39,0	0/1:46,0:46:38.47:288,0,38	0/1:21,0:21:12.28:116,0,12	0/1:19,0:19:13.44:110,0,13	0/1:34,0:34:6.75:224,0,7	1/1:17,0:17:36.11:426,36,0	0/1:26,0:26:99:100,0,131	0/1:19,0:19:22.70:138,0,23	1/1:5,0:6:13.63:57,14,0
chr10	39237816	.	AC	A	1512.89	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.932;DP=775;FS=1.927;HRun=2;HaplotypeScore=98.9839;InbreedingCoeff=0.9838;MQ=82.21;MQ0=0;MQRankSum=-1.398;QD=32.19;ReadPosRankSum=0.379;VQSLOD=3.3487;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,108,1602	0/0:14,0:14:42.14:0,42,629	0/0:17,0:17:51.11:0,51,704	0/0:27,0:27:72.03:0,72,1024	0/0:23,0:23:69.21:0,69,988	1/1:1,15:16:39.13:506,39,0	1/1:1,30:31:87.28:1129,87,0	0/0:34,0:34:99:0,99,1447	0/0:26,0:26:78.26:0,78,1150	0/0:43,0:43:99:0,101,1781	0/0:9,0:9:27.09:0,27,401	0/0:44,0:44:99:0,132,1957	0/0:25,0:25:72.24:0,72,1078	0/0:30,0:30:90.30:0,90,1344	0/0:29,0:29:87.29:0,87,1300	0/0:21,0:21:63.21:0,63,942	0/0:39,0:39:99:0,117,1730	0/0:40,0:40:99:0,120,1750	0/0:28,0:28:78.25:0,78,1147	0/0:27,0:27:78.24:0,78,1129	0/0:51,0:51:99:0,147,2146	0/0:18,0:18:54.18:0,54,809	0/0:24,0:24:69.23:0,69,1030	0/0:34,0:34:99:0,102,1528	0/0:18,0:18:54.18:0,54,809	0/0:38,0:38:99:0,111,1651	0/0:26,0:26:75.25:0,75,1122	0/0:5,0:5:12.04:0,12,180
chr10	39238238	.	AC	A	1975.87	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=11.537;DP=877;FS=7.229;HRun=1;HaplotypeScore=91.3721;InbreedingCoeff=0.9994;MQ=91.78;MQ0=0;MQRankSum=-4.784;QD=36.59;ReadPosRankSum=0.879;VQSLOD=3.7353;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,135,2106	0/0:13,0:13:39.13:0,39,623	0/0:39,0:39:99:0,114,1761	0/0:33,0:33:83.35:0,83,1336	0/0:33,0:33:96.31:0,96,1507	1/1:0,24:24:69.23:965,69,0	1/1:0,30:30:81.27:1133,81,0	0/0:42,0:42:99:0,126,1994	0/0:26,0:26:75.22:0,75,1172	0/0:34,0:34:99:0,102,1610	0/0:18,0:18:54.18:0,54,863	0/0:38,0:38:99:0,114,1794	0/0:31,0:31:93.32:0,93,1484	0/0:35,0:35:99:0,102,1628	0/0:44,0:44:99:0,132,2014	0/0:42,0:42:99:0,126,1964	0/0:43,0:43:99:0,129,2036	0/0:32,0:32:96.33:0,96,1530	0/0:14,0:14:42.14:0,42,670	0/0:28,0:28:81.28:0,81,1292	0/0:51,0:51:99:0,150,2315	0/0:22,0:22:66.21:0,66,1030	0/0:20,0:20:60.19:0,60,936	0/0:47,0:47:99:0,141,2229	0/0:21,0:21:63.21:0,63,1007	0/0:36,0:36:99:0,108,1680	0/0:27,0:27:81.26:0,81,1268	0/0:9,0:9:27.09:0,27,432
chr10	39238623	.	C	CAA	2737.22	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.894;DP=754;FS=1.732;HRun=4;HaplotypeScore=86.8655;InbreedingCoeff=0.9936;MQ=76.00;MQ0=0;MQRankSum=-3.202;QD=46.39;ReadPosRankSum=-0.671;VQSLOD=2.4460;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,114,1503	0/0:8,0:8:21.07:0,21,279	0/0:14,0:14:18.22:0,18,267	0/0:25,0:25:75.22:0,75,970	0/0:18,0:18:54.16:0,54,704	1/1:0,30:30:81.28:1458,81,0	1/1:1,28:29:78.27:1401,78,0	0/0:35,0:35:99:0,99,1292	0/0:28,0:28:81.24:0,81,1049	0/0:34,0:34:90.28:0,90,1188	0/0:11,0:11:30.08:0,30,384	0/0:37,0:37:99:0,105,1384	0/0:30,0:30:84.26:0,84,1103	0/0:24,0:24:63.19:0,63,824	0/0:44,0:44:99:0,120,1583	0/0:31,0:31:84.27:0,84,1120	0/0:41,0:41:99:0,111,1465	0/0:17,0:17:48.16:0,48,638	0/0:17,0:17:48.11:0,48,606	0/0:23,0:23:60.17:0,60,769	0/0:42,0:42:99:0,120,1583	0/0:25,0:25:75.25:0,75,999	0/0:18,0:18:36.11:0,36,479	0/0:28,0:28:72.21:0,72,941	0/0:24,0:24:66.21:0,66,866	0/0:34,0:34:84.27:0,84,1120	0/0:31,0:31:90.28:0,90,1183	0/0:14,0:14:42.12:0,42,542
chr10	39239543	.	AAATG	A	2213.10	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-0.210;DP=859;FS=3.621;HRun=0;HaplotypeScore=215.6847;InbreedingCoeff=0.9993;MQ=81.46;MQ0=0;MQRankSum=-5.441;QD=43.39;ReadPosRankSum=-0.604;VQSLOD=3.8323;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,148,3736	0/0:14,0:14:39.13:0,39,1027	0/0:25,0:25:65.86:0,66,1497	0/0:25,0:25:66.20:0,66,1509	0/0:27,0:27:78.27:0,78,2030	1/1:1,23:24:69.24:1268,69,0	1/1:9,18:26:60.19:1066,60,0	0/0:39,0:39:99:0,105,2552	0/0:38,0:38:99:0,114,2897	0/0:29,0:29:81.28:0,81,2139	0/0:16,0:16:45.15:0,45,1111	0/0:49,0:49:99:0,141,3636	0/0:34,0:34:90.30:0,90,2249	0/0:35,0:35:99:0,99,2594	0/0:44,0:44:99:0,126,3298	0/0:40,0:40:99:0,105,2710	0/0:37,0:37:99:0,99,2494	0/0:24,0:23:66.21:0,66,1665	0/0:13,0:13:33.11:0,33,872	0/0:22,0:22:60.21:0,60,1585	0/0:57,0:57:99:0,157,3996	0/0:23,0:23:66.18:0,66,1606	0/0:17,0:17:48.16:0,48,1240	0/0:31,0:31:81.28:0,81,2089	0/0:40,0:39:99:0,111,2868	0/0:37,0:36:99:0,105,2645	0/0:31,0:31:84.29:0,84,2216	0/0:9,0:9:27.09:0,27,713
chr10	39239599	.	A	AGG	36143.93	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-7.229;DP=690;FS=0.596;HRun=1;HaplotypeScore=83.8669;InbreedingCoeff=0.9967;MQ=84.33;MQ0=0;MQRankSum=-10.599;QD=55.86;ReadPosRankSum=7.082;VQSLOD=4.2982;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,31:34:99:1928,99,0	1/1:1,9:10:27.09:523,27,0	0/0:19,0:19:47.47:0,47,644	0/0:24,0:24:72.18:0,72,1108	1/1:2,16:18:48.12:933,48,0	1/1:0,19:19:57.20:1156,57,0	1/1:0,29:28:84.29:1692,84,0	1/1:2,19:21:63.19:1207,63,0	1/1:1,24:25:75.26:1502,75,0	1/1:2,29:31:90.29:1790,90,0	1/1:3,10:13:27.09:548,27,0	1/1:0,37:38:99:2184,108,0	1/1:0,26:26:75.26:1524,75,0	1/1:0,33:33:90.31:1827,90,0	1/1:0,38:38:99:2072,102,0	1/1:0,37:38:96.33:1950,96,0	1/1:1,32:33:90.31:1829,90,0	1/1:0,20:20:57.20:1158,57,0	1/1:0,14:14:42.14:848,42,0	1/1:0,7:7:21.07:427,21,0	1/1:2,41:43:99:2275,114,0	1/1:0,23:23:63.22:1277,63,0	1/1:1,12:13:36.12:731,36,0	1/1:0,32:32:90.31:1829,90,0	1/1:1,21:23:60.21:1218,60,0	1/1:1,22:24:72.23:1405,72,0	1/1:1,27:29:78.27:1580,78,0	1/1:0,12:12:36.12:730,36,0
chr10	39242293	.	GC	G	2302.43	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.134;DP=612;FS=3.508;HRun=5;HaplotypeScore=59.5862;InbreedingCoeff=0.9981;MQ=64.42;MQ0=2;MQRankSum=-0.602;QD=27.09;ReadPosRankSum=1.023;VQSLOD=3.6137;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:84.28:0,84,1146	0/0:8,0:8:24.06:0,24,311	0/0:25,0:19:48.09:0,48,607	0/0:17,0:13:33.03:0,33,399	0/0:30,0:30:84.28:0,84,1134	1/1:1,28:29:75.21:850,75,0	1/1:2,28:30:72.20:813,72,0	0/0:27,0:27:66.20:0,66,871	0/0:28,0:28:84.24:0,84,1112	0/0:12,0:12:33.11:0,33,451	0/0:16,0:16:48.14:0,48,622	0/0:18,0:18:54.16:0,54,719	0/0:17,0:17:48.16:0,48,652	0/0:11,0:11:24.08:0,24,328	0/0:29,0:29:81.25:0,81,1085	0/0:30,0:30:84.27:0,84,1132	0/0:31,0:31:81.21:0,81,1050	0/0:22,0:22:57.07:0,57,779	0/0:22,0:22:63.15:0,63,819	0/0:22,0:22:66.22:0,66,902	0/0:24,0:24:66.18:0,66,868	0/0:16,0:16:48.16:0,48,656	0/0:13,0:13:39.12:0,39,516	0/0:22,0:22:63.21:0,63,861	1/1:1,25:26:69.20:782,69,0	0/0:21,0:21:57.19:0,57,780	0/0:23,0:22:60.18:0,60,803	0/0:13,0:13:30.10:0,30,410
chr10	39242436	.	A	AC	1368.58	PASS	AB=1.000;AC=18;AF=0.375;AN=48;BaseQRankSum=4.511;DP=404;FS=2.733;HRun=2;HaplotypeScore=97.3512;InbreedingCoeff=0.7970;MQ=36.68;MQ0=23;MQRankSum=0.731;QD=8.00;ReadPosRankSum=3.463;VQSLOD=1.3906;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:20:13.33:0,13,106	0/1:10,0:10:5.84:61,0,6	./.	0/0:10,0:4:3.45:0,3,44	1/1:20,0:19:44.28:221,44,0	./.	./.	0/0:22,0:22:39:0,39,307	0/1:11,0:10:33.72:40,0,34	0/0:21,0:20:48.85:0,49,313	0/0:17,0:16:36.11:0,36,225	1/1:16,1:16:13.14:142,13,0	0/0:11,0:10:25.35:0,25,161	0/0:11,0:11:18.75:0,19,109	1/1:14,0:14:19.78:150,20,0	1/1:20,0:19:26.80:174,27,0	1/1:19,2:19:36.39:211,36,0	0/0:13,0:11:20.43:0,20,144	0/0:17,0:14:38.92:0,39,339	0/0:26,0:25:54.05:0,54,406	0/0:9,0:9:14.84:0,15,104	1/1:18,1:19:24.19:191,24,0	1/1:22,0:22:50.29:255,50,0	1/1:17,0:14:22.24:116,22,0	./.	0/0:15,0:15:41.21:0,41,326	0/0:23,0:23:54.23:0,54,431	0/0:9,0:6:14.13:0,14,114
chr10	39243147	.	G	GTTT	3772.92	PASS	AB=0.754;AC=35;AF=0.625;AN=56;BaseQRankSum=-0.405;DP=579;FS=0.000;HRun=16;HaplotypeScore=89.4386;InbreedingCoeff=0.4828;MQ=57.12;MQ0=13;MQRankSum=-3.224;QD=9.27;ReadPosRankSum=-1.010;VQSLOD=0.0548;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:41:46.24:0,46,493	1/1:8,2:9:12.90:172,13,0	0/0:28,0:10:2.95:0,3,27	0/0:14,0:8:3.83:0,4,15	1/1:9,3:18:23.76:248,24,0	1/1:13,0:13:8.19:39,8,0	1/1:11,0:11:10.01:42,10,0	1/1:34,1:50:39.41:482,39,0	1/1:7,1:14:8.95:91,9,0	0/0:24,0:25:24.43:0,24,235	0/0:11,0:11:3.55:0,4,52	1/1:8,15:23:19.25:267,19,0	0/0:13,0:17:22.69:0,23,173	0/0:17,0:17:13.51:0,14,226	1/1:9,12:26:36.33:445,36,0	1/1:11,2:25:16.24:187,16,0	1/1:10,13:25:9.52:411,10,0	0/0:8,0:13:5.51:0,6,78	0/1:12,3:17:3.79:217,0,4	1/1:15,2:20:23.98:271,24,0	1/1:4,6:9:8.99:119,9,0	0/1:6,0:9:18.91:68,0,19	0/1:6,1:16:3.06:83,0,3	0/1:8,10:19:35.53:153,0,36	0/1:22,0:21:8.67:9,0,37	1/1:18,2:32:12.73:321,13,0	1/1:15,1:29:0.36:80,0,0	1/1:2,0:7:8.95:68,9,0
chr10	39243277	.	G	GTGTC	1853.12	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=2.825;DP=556;FS=10.850;HRun=0;HaplotypeScore=140.2970;InbreedingCoeff=0.9803;MQ=70.98;MQ0=4;MQRankSum=-6.330;QD=37.06;ReadPosRankSum=-1.250;VQSLOD=3.2136;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:38:99:0,99,1647	0/0:6,0:6:18.06:0,18,333	0/0:33,0:29:60.07:0,60,962	0/0:34,0:28:59.41:0,59,995	0/0:17,0:17:35.91:0,36,615	1/1:11,10:21:45.10:994,45,0	1/1:5,8:13:17.98:386,18,0	0/0:32,0:29:72.10:0,72,1187	0/0:14,0:14:19.51:0,20,364	0/0:25,0:25:72.23:0,72,1185	0/0:19,0:19:57.20:0,57,1004	0/0:22,0:22:60.20:0,60,1038	0/0:17,0:17:48.13:0,48,813	0/0:14,0:14:42.09:0,42,682	0/0:20,0:19:36.11:0,36,605	0/0:22,0:22:66.22:0,66,1196	0/0:21,0:20:51.09:0,51,822	0/0:15,0:14:36.04:0,36,545	0/0:17,0:17:45.12:0,45,677	0/0:14,0:14:15.04:0,15,239	0/0:14,0:13:21.43:0,21,270	0/0:22,0:22:60.21:0,60,1113	0/0:14,0:14:33.05:0,33,545	0/0:18,0:18:36.08:0,36,603	1/1:15,1:16:27.09:615,27,0	0/0:31,0:30:60.16:0,60,978	0/0:15,0:15:18.05:0,18,286	0/0:11,0:11:21.07:0,21,364
chr10	39243287	.	TTGTCTCTC	T	2776.72	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=7.202;DP=575;FS=2.512;HRun=0;HaplotypeScore=174.3933;InbreedingCoeff=0.9274;MQ=61.43;MQ0=9;MQRankSum=-5.596;QD=19.15;ReadPosRankSum=-3.973;VQSLOD=2.3898;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:39:87.29:0,87,2485	0/0:7,0:7:12.04:0,12,341	0/0:31,0:23:26.44:0,26,684	0/0:42,0:25:28.03:0,28,618	0/0:17,0:17:27.09:0,27,783	0/0:22,0:22:31.01:0,31,198	0/0:11,0:11:4.48:0,4,32	1/1:17,16:30:47.96:656,48,0	0/0:14,0:14:9.03:0,9,226	0/0:25,0:25:60.20:0,60,1838	0/0:24,0:24:48.16:0,48,1410	0/0:24,0:24:66.19:0,66,1618	0/0:19,0:19:42.14:0,42,1491	0/0:14,0:14:33.11:0,33,1190	0/0:20,0:19:21.07:0,21,623	0/0:22,0:22:47.98:0,48,1149	0/0:24,0:23:36.10:0,36,891	0/0:19,0:18:30.10:0,30,979	1/1:15,0:15:24.07:481,24,0	1/1:13,0:13:8.76:54,9,0	1/1:11,2:11:14.73:111,15,0	0/0:24,0:24:49.18:0,49,1021	0/0:13,0:13:12.04:0,12,411	0/0:18,0:18:27.09:0,27,821	1/1:14,0:14:29.16:167,29,0	1/1:31,0:30:54.09:1107,54,0	1/1:16,0:15:9:169,9,0	1/1:3,7:10:12.04:231,12,0
chr10	39243301	.	C	CTCTG	1345.70	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=4.193;DP=584;FS=0.764;HRun=0;HaplotypeScore=145.2447;InbreedingCoeff=0.6786;MQ=48.99;MQ0=40;MQRankSum=-3.582;QD=29.25;ReadPosRankSum=-1.920;VQSLOD=3.1169;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:41:88.50:0,89,1452	0/0:7,0:7:12.04:0,12,231	0/0:32,0:12:26.81:0,27,391	0/0:54,0:21:29.24:0,29,412	0/0:17,0:16:27.03:0,27,431	1/1:6,14:20:36.07:930,36,0	1/1:6,6:12:21.07:534,21,0	0/0:29,0:27:12.10:0,12,298	0/0:14,0:14:9.03:0,9,141	0/0:23,0:22:63.19:0,63,1009	0/0:23,0:22:48.15:0,48,850	0/0:27,0:27:69.17:0,69,1202	0/0:20,0:20:45.10:0,45,765	0/0:17,0:15:33.11:0,33,585	0/0:23,0:22:20.58:0,21,336	0/0:22,0:22:54.17:0,54,979	0/0:21,0:19:38.71:0,39,636	0/0:17,0:15:36.06:0,36,580	0/1:14,0:14:2.60:3,0,127	0/0:13,0:12:2.80:0,3,7	0/0:13,0:10:4.61:0,5,11	0/0:26,0:26:51.15:0,51,964	0/0:9,0:9:12.04:0,12,215	0/0:20,0:20:27.07:0,27,455	0/0:16,0:16:18.41:0,18,75	0/0:28,0:27:49.40:0,49,434	0/0:15,0:14:11.95:0,12,105	0/0:9,0:9:6.87:0,7,42
chr10	39243308	.	TCTCTGTCTTCTCTCTCTC	T	4798.54	PASS	AB=0.769;AC=14;AF=0.250;AN=56;BaseQRankSum=6.284;DP=559;FS=3.814;HRun=0;HaplotypeScore=217.2803;InbreedingCoeff=0.7282;MQ=45.85;MQ0=43;MQRankSum=-6.239;QD=36.08;ReadPosRankSum=-2.567;VQSLOD=3.8295;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:36:87.25:0,87,3270	0/0:6,0:6:12.04:0,12,405	0/0:28,0:10:27.55:0,28,686	0/0:47,0:14:28.03:0,28,618	0/0:15,0:14:27.09:0,27,832	0/0:21,0:20:30.93:0,31,317	0/0:12,0:11:2.98:0,3,27	1/1:23,0:22:56.94:755,57,0	0/0:11,0:11:9.03:0,9,234	0/0:22,0:21:63.21:0,63,2455	0/0:21,0:20:48.11:0,48,1695	0/0:28,0:27:18:0,18,1967	0/0:17,0:17:45.15:0,45,2280	0/0:18,0:15:33.11:0,33,1927	0/0:24,0:22:21.37:0,21,651	0/0:19,0:19:51.10:0,51,1380	0/0:23,0:20:24.94:0,25,1156	0/0:19,0:15:39.13:0,39,1765	1/1:5,12:17:39.13:1022,39,0	1/1:2,10:11:8.76:54,9,0	1/1:11,0:9:8.60:103,9,0	0/0:26,0:26:51.07:0,51,1342	0/0:10,0:10:12.04:0,12,412	0/0:20,0:20:30.10:0,30,980	0/1:16,0:16:92.55:135,0,93	1/1:1,26:27:61.80:2179,62,0	0/1:2,12:14:63.46:319,0,63	1/1:9,0:9:12.04:231,12,0
chr10	39243316	.	TTCTCTCTC	T	2958.29	PASS	AB=0.988;AC=17;AF=0.405;AN=42;BaseQRankSum=0.297;DP=550;FS=3.712;HRun=0;HaplotypeScore=152.7993;InbreedingCoeff=0.4777;MQ=44.48;MQ0=52;MQRankSum=-2.376;QD=14.50;ReadPosRankSum=0.543;VQSLOD=2.5767;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:33:25.31:0,25,392	1/1:5,0:6:3.01:75,3,0	0/0:25,0:8:0.47:0,0,1	./.	./.	0/0:20,0:21:3.01:0,3,36	./.	1/1:24,0:22:5.93:40,6,0	./.	0/0:17,0:16:21.07:0,21,361	0/1:19,0:18:28.52:31,0,29	1/1:20,3:26:23.21:494,23,0	0/0:20,0:18:26.83:0,27,653	0/0:18,0:15:18.06:0,18,568	0/0:13,11:22:0.24:0,0,0	1/1:18,0:18:18.05:381,18,0	0/1:24,1:22:64.04:236,0,64	0/0:17,0:14:24.08:0,24,586	1/1:17,0:17:21.07:393,21,0	0/0:11,1:11:0:0,0,0	./.	1/1:22,3:25:24.08:568,24,0	./.	0/0:12,8:20:3.01:0,3,42	0/0:18,0:18:5.85:0,6,113	1/1:28,0:27:38.04:769,38,0	0/1:14,0:13:50.56:120,0,51	./.
chr10	39243325	.	TC	T	304.34	PASS	AB=0.979;AC=7;AF=0.130;AN=54;BaseQRankSum=7.350;DP=524;FS=9.910;HRun=1;HaplotypeScore=122.8062;InbreedingCoeff=0.1982;MQ=39.54;MQ0=58;MQRankSum=-2.440;QD=2.87;ReadPosRankSum=2.779;VQSLOD=-0.7059;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:33:39.82:0,40,361	0/0:5,0:5:5.03:0,5,74	0/0:15,0:1:0.89:0,1,2	./.	0/0:14,0:13:13.99:0,14,189	0/0:19,0:18:10.93:0,11,118	0/1:15,0:14:0.05:0,0,0	0/0:15,0:12:36.07:0,36,435	0/0:10,0:9:3.01:0,3,38	0/0:13,0:12:34.19:0,34,297	0/0:14,0:13:15:0,15,160	0/0:29,0:27:42.44:0,42,446	0/0:19,0:17:44.98:0,45,588	0/0:22,0:19:27.08:0,27,381	0/0:21,3:22:12.51:0,13,154	0/0:18,0:16:12.77:0,13,219	0/0:30,0:24:5.51:0,6,322	0/0:19,0:15:38.99:0,39,521	0/1:15,1:17:99:167,0,154	0/1:12,0:11:0:0,0,0	1/1:17,0:10:2.09:6,2,0	0/0:27,0:27:23.32:0,23,286	0/0:10,1:11:9.03:0,9,115	0/0:21,0:19:21.04:0,21,251	0/0:17,0:16:5.93:0,6,65	0/1:28,0:27:99:197,0,202	0/1:17,0:14:36.19:36,0,104	0/0:6,1:6:6.02:0,6,71
chr10	39243356	.	CTGTGTGTGTGTGTGTGTG	C	1451.19	PASS	AB=0.833;AC=9;AF=0.196;AN=46;BaseQRankSum=3.412;DP=455;FS=1.208;HRun=0;HaplotypeScore=184.2129;InbreedingCoeff=0.6416;MQ=39.21;MQ0=34;MQRankSum=-3.250;QD=17.92;ReadPosRankSum=0.928;VQSLOD=2.5171;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:7,0:7:9.03:0,9,478	./.	./.	0/0:9,0:10:6.02:0,6,244	./.	./.	0/0:15,0:12:29.89:0,30,844	0/0:20,0:20:30.10:0,30,1312	1/1:10,2:10:8.99:314,9,0	0/0:10,0:10:0:0,0,0	0/0:27,0:24:13.60:0,14,554	1/1:12,7:18:11.79:841,12,0	0/1:16,3:17:0:0,0,0	0/0:24,0:22:8.33:0,8,438	0/0:19,0:16:17.73:0,18,783	0/0:24,0:19:12.50:0,13,435	1/1:16,1:15:5.98:282,6,0	0/0:14,0:11:12.04:0,12,323	0/0:16,0:14:15.05:0,15,802	0/0:20,0:12:3.40:0,3,131	0/0:23,0:22:13.66:0,14,518	0/0:12,0:13:3.01:0,3,147	0/0:29,0:26:30.10:0,30,1651	1/1:9,0:10:3.01:140,3,0	0/0:22,0:21:25.37:0,25,624	0/0:19,0:15:15.05:0,15,710	0/0:4,0:3:5.05:0,5,170
chr10	39243779	.	GA	G	294.99	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.552;DP=635;FS=1.213;HRun=2;HaplotypeScore=65.5583;InbreedingCoeff=0.9943;MQ=88.22;MQ0=0;MQRankSum=-2.136;QD=26.82;ReadPosRankSum=1.913;VQSLOD=3.3772;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:99:0,99,1442	0/0:9,0:9:24.08:0,24,360	0/0:29,0:29:80.99:0,81,1157	0/0:20,0:20:51.17:0,51,740	0/0:15,0:15:45.15:0,45,674	0/0:21,0:21:60.20:0,60,899	0/0:26,0:26:75.23:0,75,1085	0/0:30,0:30:87.28:0,87,1269	0/0:22,0:22:66.22:0,66,989	0/0:30,0:30:87.28:0,87,1280	0/0:12,0:12:36.12:0,36,540	0/0:31,0:31:90.30:0,90,1328	0/0:27,0:27:81.27:0,81,1208	0/0:26,0:26:78.26:0,78,1161	0/0:26,0:24:78.25:0,78,1148	0/0:22,0:22:60.20:0,60,899	0/0:29,0:29:81.26:0,81,1195	0/0:18,0:18:54.18:0,54,803	0/0:10,0:10:30.10:0,30,445	0/0:8,0:8:24.08:0,24,359	0/0:52,0:52:99:0,150,2223	0/0:16,0:16:45.15:0,45,674	0/0:16,0:16:48.11:0,48,675	0/0:32,0:32:93.31:0,93,1382	1/1:0,11:11:30.10:389,30,0	0/0:25,0:25:75.25:0,75,1110	0/0:29,0:28:81.27:0,81,1214	0/0:10,0:10:30.10:0,30,439
chr10	39243921	.	ATGTGTGTGTGTGTG	A	4013.64	PASS	AB=0.775;AC=27;AF=0.563;AN=48;BaseQRankSum=6.207;DP=646;FS=28.350;HRun=0;HaplotypeScore=242.1568;InbreedingCoeff=0.6643;MQ=66.22;MQ0=9;MQRankSum=-4.140;QD=11.98;ReadPosRankSum=1.125;VQSLOD=1.2178;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:40:51.59:0,52,2072	1/1:3,2:5:3.01:56,3,0	./.	./.	0/0:14,0:16:6.01:0,6,67	0/0:15,0:19:33.57:0,34,781	0/0:31,0:42:34.06:0,34,843	1/1:33,0:33:2.54:17,3,0	1/1:15,1:17:8.96:252,9,0	0/0:27,0:27:20.28:0,20,643	0/0:12,0:12:18.06:0,18,980	1/1:16,9:25:9.23:464,9,0	0/0:21,0:21:21.03:0,21,889	0/0:21,0:21:9.50:0,10,359	1/1:15,10:26:24.08:875,24,0	1/1:17,7:24:1.08:133,1,0	1/1:20,6:26:9.76:353,10,0	0/0:25,0:27:46.71:0,47,2110	1/1:9,1:11:9.01:238,9,0	1/1:16,7:22:8.41:253,8,0	1/1:48,0:58:3.47:79,3,0	./.	1/1:15,0:17:6.49:197,6,0	1/1:13,3:16:6.02:234,6,0	0/0:12,0:15:6.02:0,6,132	0/1:22,9:31:99:531,0,170	1/1:16,3:19:9.03:332,9,0	./.
chr10	39244337	.	CT	C	2232.72	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.746;DP=708;FS=1.021;HRun=2;HaplotypeScore=72.2315;InbreedingCoeff=0.9988;MQ=80.65;MQ0=0;MQRankSum=-0.809;QD=32.83;ReadPosRankSum=-0.948;VQSLOD=3.2222;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,120,1792	0/0:9,0:9:27.09:0,27,405	0/0:19,0:19:42.05:0,42,614	0/0:19,0:19:44.60:0,45,524	0/0:10,0:10:30.07:0,30,426	1/1:0,22:22:63.20:818,63,0	1/1:0,33:33:84.27:1090,84,0	0/0:24,0:25:61.46:0,61,964	0/0:28,0:28:84.27:0,84,1237	0/0:23,0:24:72.01:0,72,994	0/0:11,0:11:30.06:0,30,390	0/0:36,0:36:99:0,105,1545	0/0:36,0:36:99:0,99,1460	0/0:39,0:39:99:0,111,1663	0/0:34,0:34:99:0,102,1504	0/0:29,0:29:87.29:0,87,1303	0/0:35,0:35:99:0,105,1547	0/0:24,0:24:72.20:0,72,1053	0/0:14,0:14:39.13:0,39,580	0/0:14,0:14:39.13:0,39,579	0/0:62,0:62:99:0,175,2567	0/0:14,0:14:42.13:0,42,610	0/0:14,0:14:42.14:0,42,629	0/0:49,0:48:99:0,144,2131	1/1:0,13:13:36.12:467,36,0	0/0:15,0:15:45.15:0,45,675	0/0:28,0:27:84.27:0,84,1240	0/0:9,0:9:27.09:0,27,405
chr10	39245115	.	C	CA	632.80	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.783;DP=635;FS=4.882;HRun=2;HaplotypeScore=77.0382;InbreedingCoeff=0.9814;MQ=77.10;MQ0=0;MQRankSum=-8.697;QD=18.08;ReadPosRankSum=2.109;VQSLOD=3.7930;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,126,1761	0/0:7,0:7:21.07:0,21,294	0/0:11,0:11:30.98:0,31,412	0/0:17,0:17:43.35:0,43,548	0/0:20,0:20:57.09:0,57,761	1/1:0,15:14:33.04:311,33,0	1/1:0,13:13:27.03:251,27,0	0/0:42,0:42:99:0,120,1667	0/0:27,0:27:81.25:0,81,1115	0/0:15,0:15:45.15:0,45,629	0/0:18,0:18:48.16:0,48,670	0/0:41,0:41:99:0,117,1632	0/0:25,0:25:75.23:0,75,1030	0/0:27,0:27:78.26:0,78,1087	0/0:29,0:29:87.29:0,87,1216	0/0:30,0:30:84.27:0,84,1159	0/0:33,0:33:99:0,99,1346	0/0:18,0:18:54.18:0,54,755	0/0:19,0:19:57.19:0,57,795	0/0:18,0:18:54.15:0,54,717	0/0:44,0:44:99:0,132,1721	0/0:4,0:4:12.04:0,12,168	0/0:6,0:6:18.06:0,18,252	0/0:42,0:42:99:0,120,1667	1/1:0,7:7:21.03:213,21,0	0/0:34,0:34:99:0,102,1427	0/0:23,0:22:66.21:0,66,905	0/0:7,0:7:21.07:0,21,294
chr10	39245116	.	TGC	T	748.38	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.796;DP=638;FS=4.878;HRun=0;HaplotypeScore=88.5281;InbreedingCoeff=0.9828;MQ=77.63;MQ0=0;MQRankSum=-8.736;QD=21.38;ReadPosRankSum=2.280;VQSLOD=4.1311;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,132,2614	0/0:7,0:7:21.07:0,21,426	0/0:11,0:11:33.11:0,33,640	0/0:18,0:18:54.14:0,54,1012	0/0:19,0:19:54.19:0,54,1086	1/1:0,15:14:33.09:363,33,0	1/1:0,13:13:27.07:299,27,0	0/0:44,0:44:99:0,132,2635	0/0:27,0:27:81.28:0,81,1645	0/0:15,0:15:45.15:0,45,882	0/0:18,0:18:51.17:0,51,1024	0/0:41,0:41:99:0,117,2289	0/0:24,0:24:72.25:0,72,1452	0/0:28,0:28:84.27:0,84,1646	0/0:29,0:29:87.28:0,87,1731	0/0:29,0:29:87.30:0,87,1753	0/0:33,0:33:99:0,99,1996	0/0:19,0:19:57.20:0,57,1139	0/0:18,0:18:54.19:0,54,1097	0/0:16,0:16:48.16:0,48,975	0/0:43,0:43:99:0,129,2570	0/0:4,0:4:12.04:0,12,244	0/0:6,0:6:18.06:0,18,352	0/0:42,0:42:99:0,120,2437	1/1:0,7:7:21.06:228,21,0	0/0:34,0:34:99:0,102,2073	0/0:23,0:22:69.24:0,69,1401	0/0:11,0:11:33.11:0,33,616
chr10	39245120	.	AC	A	433.40	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.794;DP=635;FS=4.873;HRun=1;HaplotypeScore=76.5591;InbreedingCoeff=0.9852;MQ=79.37;MQ0=0;MQRankSum=-8.750;QD=12.38;ReadPosRankSum=2.191;VQSLOD=2.5036;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,129,2023	0/0:7,0:7:21.07:0,21,336	0/0:12,0:12:36.11:0,36,549	0/0:20,0:20:57.10:0,57,833	0/0:20,0:20:54.18:0,54,853	1/1:0,15:14:32.78:238,33,0	1/1:0,13:13:26.78:189,27,0	0/0:42,0:42:99:0,126,1962	0/0:26,0:26:78.27:0,78,1246	0/0:15,0:15:45.15:0,45,719	0/0:17,0:17:51.17:0,51,814	0/0:40,0:40:99:0,114,1749	0/0:24,0:24:72.21:0,72,1103	0/0:28,0:28:84.29:0,84,1328	0/0:27,0:27:81.28:0,81,1295	0/0:30,0:30:87.29:0,87,1366	0/0:34,0:34:99:0,102,1581	0/0:18,0:18:51.17:0,51,815	0/0:17,0:17:51.17:0,51,815	0/0:16,0:16:48.15:0,48,744	0/0:42,0:42:99:0,126,2009	0/0:5,0:5:15.05:0,15,239	0/0:5,0:5:15.05:0,15,239	0/0:42,0:42:99:0,123,1890	1/1:0,7:7:20.82:148,21,0	0/0:34,0:34:99:0,102,1629	0/0:24,0:23:72.25:0,72,1150	0/0:12,0:12:36.11:0,36,552
chr10	39245123	.	AGC	A	633.36	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.796;DP=639;FS=4.876;HRun=0;HaplotypeScore=89.3849;InbreedingCoeff=0.9854;MQ=78.63;MQ0=0;MQRankSum=-8.733;QD=18.10;ReadPosRankSum=2.226;VQSLOD=3.4096;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,117,2362	0/0:7,0:7:21.07:0,21,412	0/0:13,0:13:39.13:0,39,731	0/0:18,0:18:54.18:0,54,1071	0/0:19,0:19:54.19:0,54,1093	1/1:0,15:14:33.04:316,33,0	1/1:0,13:13:27.05:265,27,0	0/0:44,0:44:99:0,132,2637	0/0:26,0:26:78.27:0,78,1583	0/0:15,0:15:45.15:0,45,884	0/0:17,0:17:51.17:0,51,995	0/0:38,0:38:99:0,105,2132	0/0:23,0:23:69.24:0,69,1360	0/0:28,0:28:84.29:0,84,1707	0/0:28,0:28:84.25:0,84,1631	0/0:33,0:33:99:0,99,1969	0/0:34,0:34:99:0,102,2073	0/0:18,0:18:54.19:0,54,1094	0/0:20,0:20:60.21:0,60,1183	0/0:16,0:16:48.16:0,48,934	0/0:43,0:43:99:0,129,2621	0/0:5,0:5:15.05:0,15,305	0/0:5,0:5:15.05:0,15,305	0/0:40,0:40:99:0,117,2323	1/1:0,7:7:21.01:194,21,0	0/0:37,0:37:99:0,108,2125	0/0:24,0:23:72.25:0,72,1463	0/0:14,0:14:42.14:0,42,837
chr10	39245126	.	T	TA	398.59	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.791;DP=640;FS=4.855;HRun=1;HaplotypeScore=78.5004;InbreedingCoeff=0.9866;MQ=79.20;MQ0=0;MQRankSum=-8.677;QD=11.07;ReadPosRankSum=2.036;VQSLOD=1.9670;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,114,1431	0/0:6,0:6:18.06:0,18,233	0/0:13,0:13:39.13:0,39,504	0/0:19,0:19:51.11:0,51,622	0/0:19,0:19:54.16:0,54,687	1/1:0,15:14:32.70:228,33,0	1/1:1,13:14:26.61:172,27,0	0/0:46,0:46:99:0,135,1716	0/0:27,0:27:72.22:0,72,918	0/0:15,0:15:42.14:0,42,546	0/0:15,0:15:45.15:0,45,584	0/0:37,0:37:99:0,105,1363	0/0:22,0:22:66.19:0,66,828	0/0:29,0:29:84.26:0,84,1076	0/0:26,0:26:75.23:0,75,959	0/0:34,0:34:99:0,102,1310	0/0:35,0:35:99:0,102,1308	0/0:18,0:18:54.11:0,54,666	0/0:19,0:19:57.17:0,57,708	0/0:14,0:14:42.13:0,42,534	0/0:45,0:45:99:0,132,1668	0/0:6,0:6:18.06:0,18,233	0/0:5,0:5:15.05:0,15,195	0/0:39,0:39:99:0,111,1441	1/1:0,7:7:20.75:141,21,0	0/0:36,0:36:99:0,102,1311	0/0:24,0:23:72.23:0,72,935	0/0:15,0:15:42.14:0,42,545
chr10	39245301	.	T	TA	2938.18	PASS	AB=0.579;AC=17;AF=0.304;AN=56;BaseQRankSum=-11.524;DP=427;FS=1.449;HRun=9;HaplotypeScore=48.7160;InbreedingCoeff=0.8389;MQ=62.08;MQ0=0;MQRankSum=1.515;QD=21.60;ReadPosRankSum=2.092;VQSLOD=4.3179;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:9,24:33:4.56:654,0,5	0/0:5,0:5:15:0,15,130	0/0:2,0:2:2.74:0,3,12	0/0:8,0:8:12.35:0,12,105	0/0:18,0:18:35.96:0,36,312	1/1:1,13:14:36.10:398,36,0	1/1:1,5:6:15.04:166,15,0	0/0:47,0:48:99:0,113,959	0/0:12,0:12:26.98:0,27,234	1/1:5,12:17:39.07:417,39,0	1/1:3,8:11:1.02:239,1,0	0/0:13,0:13:32.97:0,33,282	1/1:0,4:4:9.02:100,9,0	1/1:2,12:14:30.08:332,30,0	0/0:17,0:17:44.96:0,45,383	0/0:10,0:10:23.98:0,24,208	0/0:19,0:19:56.99:0,57,495	1/1:4,15:19:39.11:431,39,0	0/0:23,0:24:56:0,56,469	0/0:13,0:13:29.99:0,30,260	0/0:20,0:20:47.92:0,48,405	0/0:3,0:3:9:0,9,78	0/0:11,0:11:20.97:0,21,182	0/0:4,0:4:12:0,12,104	1/1:5,13:18:36.10:398,36,0	0/0:21,0:21:56.99:0,57,495	0/0:24,0:24:59.97:0,60,521	0/0:18,0:19:56.03:0,56,474
chr10	39245449	.	GT	G	1316.61	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=7.784;DP=466;FS=12.672;HRun=2;HaplotypeScore=50.7741;InbreedingCoeff=0.9012;MQ=78.16;MQ0=0;MQRankSum=-3.404;QD=32.11;ReadPosRankSum=0.382;VQSLOD=1.9730;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,108,1485	0/0:2,0:2:6.02:0,6,90	0/0:11,0:11:31.91:0,32,435	0/0:20,0:20:54.96:0,55,770	0/0:16,0:16:48.14:0,48,673	1/1:3,14:17:45.15:583,45,0	1/1:1,8:9:27.05:332,27,0	0/0:53,0:52:99:0,147,2116	0/0:8,0:8:21.07:0,21,315	0/0:14,0:14:42.09:0,42,588	0/0:18,0:18:54.18:0,54,808	0/0:8,0:8:21.07:0,21,314	0/0:11,0:11:30.10:0,30,448	0/0:10,0:10:30.09:0,30,422	0/0:21,0:21:63.21:0,63,942	0/0:14,0:14:42.14:0,42,629	0/0:31,0:31:93.29:0,93,1351	0/0:22,0:22:66.19:0,66,948	0/0:17,0:17:51.16:0,51,745	0/0:18,0:18:48.14:0,48,678	0/0:17,0:17:51.09:0,51,714	0/0:1,0:1:3.01:0,3,45	0/0:8,0:8:24.08:0,24,359	0/0:6,0:6:18.06:0,18,269	1/1:0,15:15:42.14:544,42,0	0/0:32,0:32:96.32:0,96,1420	0/0:16,0:16:48.15:0,48,701	0/0:13,0:13:39.12:0,39,564
chr10	39245489	.	AT	A	805.28	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.531;DP=421;FS=3.257;HRun=9;HaplotypeScore=45.6990;InbreedingCoeff=0.8970;MQ=68.90;MQ0=0;MQRankSum=-1.037;QD=21.76;ReadPosRankSum=1.203;VQSLOD=4.2294;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,117,1320	0/0:5,0:5:15.04:0,15,173	0/0:7,0:6:9.49:0,9,97	0/0:9,1:7:5.65:0,6,77	0/0:19,0:19:51.14:0,51,579	1/1:1,17:18:54.02:489,54,0	1/1:2,8:10:26.89:224,27,0	0/0:35,0:35:87.19:0,87,951	0/0:4,0:4:9.03:0,9,104	0/0:22,0:22:60.15:0,60,672	0/0:10,0:10:27.06:0,27,292	0/0:11,0:11:33.10:0,33,381	0/0:13,0:13:38.81:0,39,396	0/0:13,0:13:36.09:0,36,404	0/0:16,0:16:45.13:0,45,519	0/0:14,0:14:42.11:0,42,474	0/0:25,0:25:72.11:0,72,802	0/0:24,0:24:60.08:0,60,664	0/0:16,0:16:45.11:0,45,503	0/0:9,0:9:24.05:0,24,259	0/0:9,0:9:18.05:0,18,208	0/0:3,0:3:9.03:0,9,104	0/0:12,0:12:33.10:0,33,381	0/0:8,0:8:24.05:0,24,264	1/1:1,8:9:26.95:234,27,0	0/0:28,0:28:66.18:0,66,745	0/0:17,0:17:48.14:0,48,553	0/0:13,0:13:36.11:0,36,415
chr10	39246431	.	G	GCA	5125.78	PASS	AB=1.000;AC=36;AF=0.643;AN=56;BaseQRankSum=-9.793;DP=590;FS=7.683;HRun=0;HaplotypeScore=119.0777;InbreedingCoeff=-0.3119;MQ=66.11;MQ0=0;MQRankSum=-2.547;QD=8.84;ReadPosRankSum=-3.597;VQSLOD=3.0996;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,33:39:48.16:922,48,0	0/0:10,0:10:5.54:0,6,117	0/1:10,0:8:9.21:9,0,59	0/1:7,0:6:10.75:11,0,61	0/1:11,0:11:4.38:4,0,65	1/1:16,0:17:25.78:133,26,0	1/1:31,0:31:27.31:104,27,0	0/1:18,0:18:58.23:84,0,58	0/1:18,0:18:76.95:77,0,107	1/1:1,9:12:30.07:453,30,0	1/1:1,10:11:15.05:289,15,0	0/1:50,0:50:61.87:62,0,345	1/1:2,22:24:21.94:786,22,0	1/1:0,35:35:56.90:1098,57,0	0/1:24,0:24:22.67:23,0,160	0/1:32,0:32:47.51:48,0,227	0/1:28,0:28:24.50:25,0,242	1/1:0,19:19:39.13:752,39,0	0/1:22,0:22:51.58:52,0,100	0/1:9,0:9:29.33:29,0,56	0/1:56,0:56:4.70:5,0,400	0/1:8,0:8:20.34:52,0,20	0/1:11,0:11:19:19,0,103	0/1:31,0:31:23.27:23,0,235	1/1:16,0:16:1.32:18,1,0	0/1:13,0:13:0.05:0,0,92	0/1:16,0:16:35.88:36,0,127	0/1:12,0:12:12.42:12,0,112
chr10	39246437	.	GCGCGCGCA	G	3174.61	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=7.118;DP=565;FS=6.034;HRun=0;HaplotypeScore=182.5771;InbreedingCoeff=0.9203;MQ=63.89;MQ0=0;MQRankSum=-9.914;QD=51.20;ReadPosRankSum=2.331;VQSLOD=2.7088;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:54.19:0,54,2116	0/0:9,0:9:27.09:0,27,1087	0/0:8,0:8:13.76:0,14,197	0/0:6,0:5:2.39:0,2,43	0/0:10,0:10:30.10:0,30,1022	1/1:1,12:14:30.10:815,30,0	1/1:1,29:30:60.21:1630,60,0	0/0:19,0:19:41.97:0,42,1383	0/0:16,0:16:45.14:0,45,1596	0/0:10,0:10:30.10:0,30,991	0/0:10,0:10:15.05:0,15,602	0/0:51,0:51:99:0,150,5256	0/0:18,0:18:44.82:0,45,1821	0/0:31,0:31:56.94:0,57,2288	0/0:23,0:23:69.24:0,69,2547	0/0:28,0:28:84.20:0,84,3093	0/0:28,0:28:84.27:0,84,3028	0/0:18,0:18:39.13:0,39,1577	0/0:21,0:21:60.06:0,60,1817	0/0:8,0:8:21.07:0,21,745	0/0:60,0:60:99:0,165,6072	0/0:8,0:8:24.08:0,24,619	0/0:14,0:14:39.12:0,39,1348	0/0:31,0:31:78.06:0,78,3079	1/1:1,17:18:29.98:871,30,0	0/0:14,0:14:42.14:0,42,1548	0/0:16,0:16:48.16:0,48,1659	0/0:11,0:11:33.11:0,33,1322
chr10	39246443	.	GCA	G	558.74	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=9.716;DP=563;FS=9.195;HRun=0;HaplotypeScore=125.7408;InbreedingCoeff=0.6639;MQ=64.40;MQ0=0;MQRankSum=-7.333;QD=8.34;ReadPosRankSum=1.932;VQSLOD=2.7284;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:66:0,66,806	0/0:9,0:9:24.08:0,24,383	0/0:13,0:11:11.53:0,12,133	0/0:9,0:8:7.88:0,8,108	0/0:10,0:10:21.05:0,21,317	1/1:14,0:14:26.58:173,27,0	1/1:29,0:29:50.85:316,51,0	0/0:18,0:18:42.10:0,42,565	0/0:14,0:14:39.09:0,39,560	0/0:12,0:12:33.03:0,33,385	0/0:11,0:11:21.04:0,21,270	0/0:48,0:48:96.41:0,96,1708	0/0:20,0:20:50.93:0,51,713	0/0:30,0:30:63.18:0,63,881	0/0:22,0:22:51.17:0,51,828	0/0:26,0:26:69.22:0,69,1105	0/0:25,2:27:5.60:0,6,1049	0/0:15,0:15:39.13:0,39,581	0/0:16,1:17:1.30:0,1,548	0/1:7,0:7:16.71:17,0,250	0/0:62,0:62:99:0,136,2089	0/0:8,0:8:1.94:0,2,127	0/0:12,0:12:32.95:0,33,458	0/0:31,0:31:75.08:0,75,1151	1/1:17,0:17:29.65:199,30,0	0/0:15,1:16:7.35:0,7,563	0/0:18,0:18:48.02:0,48,657	0/0:11,0:11:33.08:0,33,505
chr10	39247198	.	ACGATCCTGATAAGG	A	735.44	PASS	AB=0.960;AC=3;AF=0.056;AN=54;BaseQRankSum=4.777;DP=493;FS=4.425;HRun=0;HaplotypeScore=192.5566;InbreedingCoeff=0.6344;MQ=90.89;MQ0=0;MQRankSum=-3.631;QD=23.72;ReadPosRankSum=1.730;VQSLOD=2.7229;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,102,7041	0/0:6,0:6:18.06:0,18,1276	0/0:20,0:20:57.20:0,57,3532	0/0:32,0:32:89.13:0,89,5410	0/0:19,0:19:54.19:0,54,3250	0/0:12,0:12:36.12:0,36,2111	0/0:19,0:19:57.20:0,57,3764	0/0:29,0:29:87.30:0,87,5486	0/0:16,0:16:48.16:0,48,3421	0/0:18,0:18:54.15:0,54,3298	0/0:9,0:9:27.09:0,27,1716	0/0:15,0:15:45.15:0,45,2684	0/0:12,0:12:36.12:0,36,2349	0/0:11,0:11:33.11:0,33,2111	0/0:15,0:15:45.15:0,45,3207	0/0:21,0:21:60.21:0,60,4033	0/0:28,0:28:78.27:0,78,5373	0/0:16,0:16:48.16:0,48,3222	0/0:21,0:21:60.21:0,60,3791	0/0:10,0:10:30.10:0,30,2006	0/0:41,0:41:99:0,120,8087	0/0:12,0:12:33.11:0,33,2204	0/0:9,0:9:27.09:0,27,1706	0/0:26,0:26:78.27:0,78,5076	1/1:0,7:7:18.06:778,18,0	0/1:23,1:24:60.51:61,0,4293	0/0:11,0:11:30.10:0,30,1998	./.
chr10	39247586	.	C	CA	16322.49	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-17.278;DP=693;FS=29.896;HRun=1;HaplotypeScore=68.2438;InbreedingCoeff=0.9991;MQ=87.45;MQ0=0;MQRankSum=-3.976;QD=41.22;ReadPosRankSum=3.661;VQSLOD=2.7062;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,105,1361	1/1:0,9:9:27.09:404,27,0	0/0:23,0:23:63.20:0,63,804	0/0:26,0:25:71.81:0,72,871	1/1:0,17:17:48.02:644,48,0	0/0:26,0:26:78.25:0,78,1012	0/0:23,0:23:60.15:0,60,740	1/1:0,24:24:72.23:1056,72,0	1/1:0,20:20:57.19:854,57,0	0/0:25,0:25:69.21:0,69,872	0/0:14,0:14:42.13:0,42,537	1/1:0,34:34:99:1484,99,0	0/0:24,0:24:72.23:0,72,931	0/0:39,0:39:99:0,111,1425	1/1:0,36:36:99:1484,99,0	1/1:1,20:21:54.18:809,54,0	1/1:1,33:34:96.33:1438,96,0	0/0:35,0:35:99:0,99,1265	1/1:2,13:15:42.12:602,42,0	1/1:0,23:23:69.19:1009,69,0	1/1:0,41:41:99:1663,111,0	1/1:1,20:21:51.17:761,51,0	1/1:0,11:11:27.09:404,27,0	1/1:1,33:34:96.33:1439,96,0	0/0:27,0:27:78.25:0,78,1010	1/1:0,31:31:90.29:1327,90,0	1/1:1,17:18:42.14:629,42,0	1/1:0,7:7:21.07:315,21,0
chr10	39248481	.	GTCTCTC	G	2681.38	PASS	AC=10;AF=0.185;AN=54;BaseQRankSum=8.133;DP=545;FS=4.873;HRun=0;HaplotypeScore=117.1073;InbreedingCoeff=0.9336;MQ=71.14;MQ0=14;MQRankSum=-8.534;QD=32.31;ReadPosRankSum=0.482;VQSLOD=3.2665;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,22:28:36.12:758,36,0	0/0:4,0:4:9.03:0,9,229	0/0:56,0:31:31.07:0,31,1288	0/0:80,0:46:18.93:0,19,1304	0/0:5,0:5:12.04:0,12,412	0/0:17,0:17:21.07:0,21,562	0/0:31,0:31:48.15:0,48,1186	0/0:22,0:22:42.14:0,42,1158	0/0:16,0:16:39.13:0,39,1190	1/1:5,6:11:15.05:308,15,0	./.	0/0:14,0:14:33.11:0,33,1091	1/1:3,9:12:24.08:514,24,0	1/1:1,17:18:42.14:937,42,0	0/0:25,0:25:66.23:0,66,2164	0/0:17,0:17:48.15:0,48,1398	0/0:26,0:26:66.20:0,66,2184	1/1:5,9:14:15.05:334,15,0	0/0:12,0:11:24.08:0,24,626	0/0:4,0:4:9.03:0,9,278	0/0:39,0:39:99:0,99,3158	0/0:10,0:10:26.81:0,27,715	0/0:6,0:6:11.57:0,12,382	0/0:38,0:38:93.28:0,93,2902	0/0:4,0:4:12.01:0,12,193	0/0:6,0:6:15.05:0,15,480	0/0:20,0:20:57.20:0,57,1811	0/0:6,0:6:15.05:0,15,456
chr10	39248509	.	C	CCAGT	237.47	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=4.787;DP=505;FS=1.941;HRun=0;HaplotypeScore=119.6961;InbreedingCoeff=0.7282;MQ=74.88;MQ0=3;MQRankSum=-3.317;QD=2.86;ReadPosRankSum=-3.233;VQSLOD=1.3670;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:24.06:0,24,336	0/0:9,0:9:24.04:0,24,349	0/0:31,0:26:26.86:0,27,413	0/1:44,0:39:5.09:5,0,536	0/0:15,0:15:39.13:0,39,637	1/1:6,9:15:11.99:217,12,0	1/1:12,12:24:6.02:125,6,0	0/0:24,0:24:45.12:0,45,637	0/0:10,0:10:27.08:0,27,427	0/0:10,0:10:21.04:0,21,288	0/0:9,0:9:24.05:0,24,312	0/0:15,0:15:30.05:0,30,422	0/0:9,0:9:15.01:0,15,221	0/0:21,0:21:14.98:0,15,219	0/0:24,0:24:54.13:0,54,805	0/0:16,0:16:36.12:0,36,601	0/0:26,0:26:48.15:0,48,767	0/0:12,0:12:15.01:0,15,221	0/0:13,0:13:33.07:0,33,471	0/0:15,0:15:36.12:0,36,595	0/0:34,0:34:81.23:0,81,1262	0/0:13,0:13:27.08:0,27,429	0/0:10,0:10:21.03:0,21,274	0/0:27,0:27:63.17:0,63,972	0/0:10,0:10:27.06:0,27,378	0/0:13,0:13:30.08:0,30,449	0/0:16,0:16:36.07:0,36,522	0/0:9,0:9:27.09:0,27,449
chr10	39248540	.	T	TCTG	222.60	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.114;DP=494;FS=0.000;HRun=0;HaplotypeScore=103.5003;InbreedingCoeff=0.9604;MQ=82.91;MQ0=1;MQRankSum=-2.467;QD=7.95;ReadPosRankSum=-0.247;VQSLOD=2.9698;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:36.08:0,36,396	0/0:12,0:12:33.11:0,33,569	0/0:32,0:28:54.19:0,54,1082	0/0:50,0:42:74.79:0,75,1348	0/0:21,0:21:63.22:0,63,1152	1/1:11,4:15:19.45:219,19,0	1/1:10,3:13:9.03:116,9,0	0/0:22,0:22:63.21:0,63,1098	0/0:12,0:12:36.12:0,36,671	0/0:15,0:15:45.07:0,45,456	0/0:19,0:19:54.13:0,54,586	0/0:12,0:12:36.12:0,36,633	0/0:9,0:9:24.06:0,24,267	0/0:11,0:11:18.52:0,19,192	0/0:19,0:19:57.20:0,57,1057	0/0:13,0:13:39.12:0,39,691	0/0:18,0:18:48.16:0,48,864	0/0:13,0:13:30.08:0,30,339	0/0:13,0:13:36.12:0,36,671	0/0:17,0:17:51.17:0,51,939	0/0:29,0:29:87.30:0,87,1575	0/0:13,0:13:39.13:0,39,727	0/0:17,0:17:51.16:0,51,902	0/0:18,0:18:51.12:0,51,885	0/0:14,0:14:39.09:0,39,405	0/0:16,0:16:48.16:0,48,884	0/0:11,0:11:33.11:0,33,602	0/0:14,0:14:42.14:0,42,783
chr10	39248876	.	AAGGGG	A	2244.40	PASS	AC=16;AF=0.296;AN=54;BaseQRankSum=6.671;DP=341;FS=18.134;HRun=0;HaplotypeScore=79.0261;InbreedingCoeff=0.8011;MQ=81.69;MQ0=0;MQRankSum=-8.551;QD=23.88;ReadPosRankSum=1.601;VQSLOD=1.9368;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:15,10:25:39.07:632,39,0	0/0:3,0:3:3.01:0,3,88	0/0:13,0:10:16.22:0,16,193	0/0:35,0:24:25:0,25,540	0/0:9,0:9:15.02:0,15,306	1/1:10,5:15:20.99:297,21,0	1/1:7,10:17:21.03:366,21,0	0/0:17,0:17:33.05:0,33,636	0/0:17,0:17:36.12:0,36,1023	1/1:6,1:7:6.02:103,6,0	./.	0/0:16,0:16:42.12:0,42,939	1/1:5,4:9:14.99:218,15,0	1/1:1,9:10:30.10:554,30,0	0/0:9,0:9:21.05:0,21,505	0/0:10,0:10:27.08:0,27,682	0/0:26,0:26:57.18:0,57,1521	1/1:6,2:8:15:204,15,0	0/0:8,0:8:9.03:0,9,263	0/0:5,0:5:6.02:0,6,175	0/0:30,0:30:69.21:0,69,1759	0/0:5,0:5:9.02:0,9,200	0/0:6,0:6:9.01:0,9,121	0/0:20,0:20:48.16:0,48,1379	1/1:3,0:3:3.01:58,3,0	0/0:6,0:6:9.03:0,9,263	0/0:7,0:7:3.01:0,3,88	0/0:3,0:3:3.01:0,3,88
chr10	39248914	.	AAAGGAG	A	2519.03	PASS	AB=0.955;AC=20;AF=0.357;AN=56;BaseQRankSum=9.051;DP=297;FS=9.042;HRun=0;HaplotypeScore=83.4000;InbreedingCoeff=0.7414;MQ=75.21;MQ0=0;MQRankSum=-9.580;QD=28.63;ReadPosRankSum=0.634;VQSLOD=2.6809;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,11:14:29.89:445,30,0	0/0:1,0:1:3.01:0,3,110	0/1:16,0:9:1.73:2,0,245	0/0:35,0:23:40.11:0,40,621	0/0:4,0:4:12.01:0,12,270	1/1:2,6:8:18.02:387,18,0	1/1:6,4:10:20.98:384,21,0	0/0:30,0:30:84.22:0,84,2398	0/0:11,0:11:33.10:0,33,1107	1/1:2,4:6:18.02:383,18,0	1/1:0,2:2:5.98:93,6,0	0/0:10,0:10:30.06:0,30,814	1/1:4,3:7:14.97:261,15,0	1/1:1,7:8:24.01:496,24,0	0/0:12,0:12:36.10:0,36,1110	0/0:18,0:18:54.09:0,54,1507	0/0:19,0:19:43.98:0,44,1434	1/1:4,1:5:14.82:150,15,0	0/0:9,0:9:24.08:0,24,739	0/0:2,0:2:6.01:0,6,137	0/0:19,0:19:54.17:0,54,1887	0/0:2,0:2:6.02:0,6,220	0/0:5,0:5:15.03:0,15,455	0/0:26,0:26:75.20:0,75,2344	1/1:0,1:1:3.01:73,3,0	0/1:9,1:10:43.27:43,0,709	0/0:4,0:4:12.04:0,12,372	0/0:2,0:2:6.02:0,6,213
chr10	39248945	.	CTGG	C	2080.17	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=9.688;DP=344;FS=21.363;HRun=0;HaplotypeScore=77.8654;InbreedingCoeff=0.9274;MQ=71.79;MQ0=0;MQRankSum=-8.283;QD=36.49;ReadPosRankSum=-0.876;VQSLOD=2.2263;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,16:18:36.04:551,36,0	0/0:1,0:1:3.01:0,3,69	0/0:10,0:7:18.51:0,19,341	0/0:13,0:12:15.52:0,16,574	0/0:4,0:4:12.04:0,12,266	0/0:14,0:14:42.14:0,42,951	0/0:11,0:11:27.09:0,27,600	0/0:19,0:19:45.10:0,45,972	0/0:17,0:17:45.15:0,45,1027	1/1:1,11:12:33.11:562,33,0	1/1:0,3:3:9.03:153,9,0	0/0:13,0:13:36.12:0,36,815	1/1:0,7:7:21.07:358,21,0	1/1:2,9:11:26.94:364,27,0	0/0:21,0:21:63.22:0,63,1452	0/0:21,0:21:60.21:0,60,1384	0/0:20,0:20:60.21:0,60,1359	1/1:0,6:6:18.01:275,18,0	0/0:12,0:12:36.02:0,36,774	0/0:4,0:4:12.04:0,12,277	0/0:21,0:21:63.22:0,63,1411	0/0:6,0:6:15.05:0,15,346	0/0:9,0:9:27.09:0,27,622	0/0:29,0:29:81.28:0,81,1867	0/0:5,0:5:15.05:0,15,335	0/0:16,0:16:45.15:0,45,1038	0/0:14,0:14:42.14:0,42,968	0/0:7,0:7:21.07:0,21,484
chr10	39249062	.	T	TC	2817.30	PASS	AB=0.938;AC=15;AF=0.288;AN=52;BaseQRankSum=10.453;DP=362;FS=2.259;HRun=1;HaplotypeScore=75.8848;InbreedingCoeff=0.8797;MQ=61.40;MQ0=6;MQRankSum=-7.113;QD=23.88;ReadPosRankSum=2.229;VQSLOD=3.8433;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,12:16:38.96:524,39,0	0/0:2,0:2:3:0,3,27	0/0:13,0:10:15.03:0,15,178	0/0:15,0:11:15.19:0,15,195	0/0:15,0:14:27.02:0,27,302	./.	./.	0/0:27,0:26:72.12:0,72,847	0/0:6,0:6:12.02:0,12,140	1/1:6,16:22:63.15:805,63,0	1/1:4,6:10:20.98:254,21,0	0/0:14,0:14:33.03:0,33,358	1/1:4,11:15:27.09:366,27,0	1/1:1,13:14:27.09:374,27,0	0/0:9,0:9:21.05:0,21,248	0/0:18,0:18:30.09:0,30,373	0/0:30,0:30:63.11:0,63,742	1/1:2,12:14:39.10:531,39,0	0/0:15,0:15:42.14:0,42,544	0/0:11,0:10:29.93:0,30,328	0/0:12,0:12:30.06:0,30,349	0/0:3,0:3:6.02:0,6,78	0/0:17,0:17:41.67:0,42,416	0/0:21,0:20:30.02:0,30,359	1/1:0,0:10:20.86:151,21,0	0/1:14,1:15:0.83:1,0,383	0/0:9,0:9:24.06:0,24,295	0/0:5,0:5:12.04:0,12,155
chr10	39249304	.	GCC	G	676.57	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.932;DP=655;FS=19.683;HRun=2;HaplotypeScore=111.3075;InbreedingCoeff=0.9630;MQ=88.67;MQ0=0;MQRankSum=-7.647;QD=22.55;ReadPosRankSum=0.901;VQSLOD=0.8103;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:90.31:0,90,1749	0/0:5,0:5:15.05:0,15,295	0/0:27,0:27:81.27:0,81,1468	0/0:25,0:25:72.20:0,72,1338	0/0:21,0:21:57.20:0,57,1107	1/1:1,13:14:39.06:377,39,0	1/1:1,15:16:44.99:421,45,0	0/0:36,0:36:99:0,105,2036	0/0:22,0:22:66.21:0,66,1206	0/0:29,0:29:81.27:0,81,1580	0/0:18,0:18:36.12:0,36,705	0/0:31,0:31:93.31:0,93,1781	0/0:34,0:34:99:0,102,1933	0/0:20,0:20:60.21:0,60,1179	0/0:29,0:29:87.28:0,87,1654	0/0:42,0:42:99:0,126,2406	0/0:19,0:19:57.20:0,57,1098	0/0:21,0:21:57.20:0,57,1105	0/0:14,0:14:42.13:0,42,791	0/0:17,0:17:48.15:0,48,909	0/0:36,0:36:99:0,108,1995	0/0:30,0:30:81.28:0,81,1590	0/0:25,0:24:69.23:0,69,1280	0/0:20,0:20:60.21:0,60,1178	0/0:20,0:20:54.10:0,54,1060	0/0:26,0:26:78.26:0,78,1456	0/0:24,0:24:63.22:0,63,1200	0/0:3,0:3:9.03:0,9,177
chr10	39249307	.	GGTATCATAGGC	G	2248.86	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.767;DP=649;FS=17.802;HRun=0;HaplotypeScore=223.0456;InbreedingCoeff=0.9668;MQ=86.29;MQ0=0;MQRankSum=-8.149;QD=77.55;ReadPosRankSum=1.256;VQSLOD=2.0511;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:93.30:0,93,5105	0/0:6,0:6:18.06:0,18,1048	0/0:23,0:23:69.23:0,69,3006	0/0:24,0:24:72.25:0,72,3383	0/0:22,0:22:63.22:0,63,3682	1/1:0,13:13:36.12:1080,36,0	1/1:1,15:16:45.15:1290,45,0	0/0:34,0:34:99:0,99,5274	0/0:20,0:20:60.20:0,60,3313	0/0:30,0:30:90.26:0,90,4792	0/0:17,0:17:39.09:0,39,2107	0/0:30,0:30:90.30:0,90,5151	0/0:30,0:30:90.29:0,90,4849	0/0:22,0:22:66.23:0,66,3511	0/0:28,0:28:84.29:0,84,4589	0/0:42,0:42:99:0,126,6911	0/0:21,0:21:63.18:0,63,3409	0/0:21,0:21:57.20:0,57,3349	0/0:14,0:14:42.14:0,42,2290	0/0:17,0:17:48.15:0,48,2525	0/0:37,0:37:99:0,111,6332	0/0:30,0:30:81.28:0,81,4618	0/0:23,0:22:60.21:0,60,3354	0/0:21,0:21:63.22:0,63,3561	0/0:21,0:21:57.09:0,57,2957	0/0:28,0:28:78.27:0,78,4466	0/0:24,0:24:63.22:0,63,3317	0/0:3,0:3:9.03:0,9,476
chr10	39249486	.	C	CCT	415.43	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-0.948;DP=721;FS=17.812;HRun=0;HaplotypeScore=155.3854;InbreedingCoeff=0.9746;MQ=59.36;MQ0=12;MQRankSum=0.829;QD=25.96;ReadPosRankSum=-1.032;VQSLOD=3.4029;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:55:99:0,118,1576	0/0:7,0:7:18.06:0,18,234	0/0:41,0:29:64.38:0,64,783	0/0:45,0:29:58.35:0,58,728	0/0:25,0:25:57.19:0,57,748	0/0:20,0:20:32.62:0,33,442	0/0:39,0:39:71.82:0,72,1148	0/0:23,0:20:36.05:0,36,421	0/0:13,0:13:36.12:0,36,468	0/0:35,0:36:95.88:0,96,1194	0/0:14,0:14:30.10:0,30,386	0/0:24,0:24:57.13:0,57,708	0/0:30,0:29:40.42:0,40,685	0/0:27,0:27:56.91:0,57,741	0/0:35,0:35:76.56:0,77,1124	0/0:31,0:31:87.18:0,87,1074	0/0:30,0:30:60.15:0,60,756	0/0:25,0:25:69.22:0,69,897	0/0:16,0:15:39.12:0,39,494	0/0:21,0:21:45.10:0,45,566	0/0:37,0:37:81.26:0,81,1053	0/0:16,0:16:30.10:0,30,386	0/0:20,0:20:39.12:0,39,507	0/0:27,0:26:60.20:0,60,790	1/1:2,14:16:30.10:510,30,0	0/0:21,0:21:51.12:0,51,643	0/0:18,0:19:50.67:0,51,541	0/0:6,0:6:15.03:0,15,180
chr10	39249518	.	ACTTCT	A	10906.43	PASS	AB=0.535;AC=33;AF=0.589;AN=56;BaseQRankSum=-1.846;DP=716;FS=0.356;HRun=0;HaplotypeScore=200.6229;InbreedingCoeff=0.9033;MQ=54.28;MQ0=18;MQRankSum=-5.513;QD=31.80;ReadPosRankSum=5.431;VQSLOD=4.5456;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:53:97.88:0,98,2669	1/1:1,4:5:12.04:199,12,0	0/0:42,0:23:48.15:0,48,1322	0/0:48,0:33:72.03:0,72,1831	1/1:9,13:22:22.25:459,22,0	0/0:18,0:18:36.12:0,36,973	0/0:45,0:44:75.16:0,75,1725	1/1:9,16:22:42.14:763,42,0	1/1:2,16:18:42.10:730,42,0	0/0:37,0:37:87.29:0,87,2439	0/0:16,0:16:40.31:0,40,714	1/1:10,3:14:18.02:296,18,0	0/0:37,0:36:54.19:0,54,1535	0/0:33,0:33:78.27:0,78,2059	1/1:5,27:32:75.21:1403,75,0	1/1:5,24:29:69.23:1214,69,0	1/1:5,21:26:54.18:1041,54,0	0/0:26,0:26:57.20:0,57,1630	1/1:11,5:13:9.76:324,10,0	1/1:4,14:18:27.01:454,27,0	1/1:15,11:26:10.95:290,11,0	1/1:5,15:20:32.86:610,33,0	1/1:1,20:21:23.65:408,24,0	1/1:10,15:24:42.02:811,42,0	0/0:15,0:15:30.10:0,30,869	0/1:3,20:22:25.71:1104,0,26	1/1:6,10:16:30.10:565,30,0	1/1:3,4:7:12.04:236,12,0
chr10	39249555	.	G	GTC	11572.24	PASS	AB=0.726;AC=43;AF=0.768;AN=56;BaseQRankSum=0.953;DP=754;FS=5.390;HRun=0;HaplotypeScore=191.8065;InbreedingCoeff=0.1581;MQ=52.02;MQ0=18;MQRankSum=-2.133;QD=16.92;ReadPosRankSum=3.408;VQSLOD=4.6459;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:55,0:52:99:974,99,0	0/1:2,2:4:59.85:84,0,60	0/1:32,0:18:0.20:0,0,110	0/0:46,0:31:13.71:0,14,152	1/1:8,14:21:21.49:453,21,0	1/1:24,0:24:17.40:96,17,0	1/1:31,0:29:23.20:129,23,0	1/1:22,7:24:23.34:581,23,0	0/1:11,12:23:28.48:533,0,28	1/1:37,0:37:77.73:694,78,0	1/1:17,0:17:9.01:83,9,0	0/1:8,8:15:34.66:262,0,35	1/1:28,0:28:37.46:201,37,0	1/1:33,0:33:54.53:291,55,0	1/1:10,26:37:52.25:992,52,0	1/1:19,11:30:15.21:705,15,0	1/1:18,11:29:6.13:578,6,0	1/1:20,0:20:41.98:383,42,0	1/1:18,14:26:23.79:599,24,0	0/1:17,2:19:77.35:262,0,77	0/1:17,14:30:77.79:293,0,78	1/1:9,17:26:45.15:719,45,0	1/1:7,10:17:33.11:517,33,0	0/1:13,24:36:77.79:781,0,78	0/0:23,0:23:42.11:0,42,488	0/1:22,11:32:44.69:751,0,45	0/1:5,12:15:2.81:443,0,3	1/1:1,3:4:12.03:169,12,0
chr10	39249557	.	C	CTGTC	3765.36	PASS	AB=0.994;AC=28;AF=0.500;AN=56;BaseQRankSum=6.136;DP=773;FS=3.444;HRun=0;HaplotypeScore=248.0963;InbreedingCoeff=0.2462;MQ=50.02;MQ0=18;MQRankSum=-3.293;QD=7.50;ReadPosRankSum=10.867;VQSLOD=1.2400;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:55:98.48:529,98,0	0/0:4,0:4:0.46:0,0,45	0/0:33,0:18:29.04:0,29,277	0/0:47,0:30:3.14:0,3,318	0/1:22,0:21:1.05:1,0,62	1/1:2,1:26:18.06:311,18,0	1/1:2,1:30:24.08:412,24,0	0/1:31,0:26:9.15:9,0,131	0/1:22,0:22:6.84:7,0,93	1/1:0,0:37:78.99:464,79,0	1/1:0,0:18:8.71:47,9,0	0/1:15,0:15:13.92:15,0,14	1/1:1,1:30:39.13:673,39,0	1/1:2,0:33:57.19:966,57,0	0/1:36,0:36:13.78:14,0,96	0/0:30,0:30:4.49:0,4,136	0/0:32,0:31:5.58:0,6,117	1/1:2,0:21:43.31:233,43,0	0/1:34,0:28:3.45:3,0,162	0/0:20,0:20:18.10:0,18,229	0/0:33,0:31:11.44:0,11,252	0/1:27,0:27:12.22:12,0,49	0/1:17,0:17:7.33:7,0,25	0/0:39,0:36:7.07:0,7,302	0/1:20,0:20:50.98:51,0,240	0/0:32,0:32:4.29:0,4,176	0/1:18,0:16:3.40:3,0,69	1/1:4,0:4:3.38:7,3,0
chr10	39250117	.	C	CT	4550.73	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=1.849;DP=708;FS=13.152;HRun=2;HaplotypeScore=108.7677;InbreedingCoeff=0.9945;MQ=85.46;MQ0=0;MQRankSum=-10.402;QD=38.90;ReadPosRankSum=0.231;VQSLOD=3.1505;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,21:27:69.21:970,69,0	0/0:9,0:9:27.08:0,27,335	0/0:32,0:32:84.25:0,84,1029	0/0:23,0:24:38.55:0,39,684	0/0:28,0:28:84.25:0,84,1028	0/0:35,0:35:84.26:0,84,1040	0/0:19,0:19:48.15:0,48,594	0/0:25,0:25:72.23:0,72,893	0/0:29,0:29:87.27:0,87,1078	1/1:0,27:27:78.25:1104,78,0	1/1:2,20:22:57.15:796,57,0	0/0:33,0:33:90.28:0,90,1115	1/1:2,16:18:51.14:689,51,0	1/1:0,14:14:42.14:604,42,0	0/0:36,0:36:99:0,105,1288	0/0:24,0:24:72.23:0,72,893	0/0:32,0:32:96.27:0,96,1163	1/1:1,8:9:27.09:387,27,0	0/0:35,0:34:62.01:0,62,1153	0/0:29,0:29:78.23:0,78,954	0/0:25,0:25:75.22:0,75,917	0/0:18,0:18:54.16:0,54,657	0/0:34,0:34:96.30:0,96,1190	0/0:19,0:19:54.17:0,54,668	0/0:22,0:22:57.18:0,57,705	0/0:31,2:33:13.01:0,13,1067	0/0:33,0:33:90.27:0,90,1103	0/0:17,0:17:51.16:0,51,631
chr10	39250146	.	G	GCTTGTTCTCC	23485.77	PASS	AB=0.917;AC=19;AF=0.339;AN=56;BaseQRankSum=3.171;DP=677;FS=14.524;HRun=0;HaplotypeScore=199.2126;InbreedingCoeff=0.9190;MQ=81.34;MQ0=0;MQRankSum=-18.694;QD=107.73;ReadPosRankSum=-2.619;VQSLOD=3.3983;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,16:23:69.19:3178,69,0	0/0:11,0:11:33.11:0,33,1093	0/0:21,0:21:57.16:0,57,1445	0/0:23,0:23:47.32:0,47,1493	0/0:27,0:27:81.24:0,81,2495	1/1:7,0:30:78.32:3404,78,0	1/1:14,0:24:60.30:2323,60,0	0/0:35,0:35:99:0,102,3072	0/0:29,0:29:87.28:0,87,2776	1/1:13,12:26:72.25:3509,72,0	1/1:14,6:20:48.15:1742,48,0	0/0:30,0:30:87.28:0,87,2665	1/1:6,9:18:48.62:2161,49,0	1/1:8,8:17:48.16:2297,48,0	0/0:35,0:35:99:0,99,3275	0/0:26,0:26:72.23:0,72,2241	0/0:30,0:30:90.31:0,90,2881	1/1:2,4:6:18.06:861,18,0	0/0:23,0:23:59.25:0,59,1859	0/0:29,0:29:87.30:0,87,2811	0/0:25,0:25:75.26:0,75,2347	0/0:18,0:18:51.17:0,51,1627	0/0:26,0:26:78.27:0,78,2602	0/0:19,0:19:57.20:0,57,1902	1/1:13,0:32:87.40:3754,87,0	0/1:20,2:22:99:256,0,1825	0/0:37,0:37:99:0,99,3058	0/0:15,0:15:45.15:0,45,1440
chr10	39250298	.	T	TACAA	11589.42	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=10.157;DP=675;FS=40.121;HRun=0;HaplotypeScore=107.9981;InbreedingCoeff=0.9651;MQ=84.60;MQ0=0;MQRankSum=-7.874;QD=59.43;ReadPosRankSum=1.525;VQSLOD=3.3860;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,35:41:99:2622,103,0	0/0:13,0:13:36.11:0,36,651	0/0:28,0:28:62.80:0,63,1162	0/0:27,0:27:66.12:0,66,1129	0/0:21,0:21:57.19:0,57,1059	1/1:1,25:26:57.15:1475,57,0	1/1:5,19:26:51.14:1292,51,0	0/0:41,0:41:99:0,105,1977	0/0:25,0:25:69.24:0,69,1310	1/1:2,15:18:48.11:1157,48,0	1/1:1,16:17:39.08:984,39,0	0/0:28,0:28:81.28:0,81,1535	1/1:0,23:23:63.22:1697,63,0	1/1:0,14:14:30.10:804,30,0	0/0:38,0:38:99:0,108,2014	0/0:36,0:36:99:0,102,1894	0/0:36,0:36:99:0,99,1843	1/1:0,8:9:21.07:567,21,0	0/0:25,0:25:72.25:0,72,1354	0/0:20,0:20:60.19:0,60,1077	0/0:31,0:31:93.26:0,93,1600	0/0:11,0:11:33.11:0,33,619	0/0:13,0:13:39.12:0,39,692	0/0:27,0:27:81.28:0,81,1528	1/1:3,15:21:39.09:991,39,0	0/0:29,1:30:3.47:0,3,1397	0/0:26,0:25:75.22:0,75,1351	0/0:4,0:4:9.03:0,9,170
chr10	39250616	.	C	CCCTTGTT	4204	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=0.293;DP=736;FS=1.322;HRun=0;HaplotypeScore=173.2072;InbreedingCoeff=0.9999;MQ=76.53;MQ0=0;MQRankSum=-9.142;QD=93.42;ReadPosRankSum=-0.148;VQSLOD=4.0798;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,132,3115	0/0:16,0:16:45.15:0,45,1116	0/0:19,0:19:40.17:0,40,1122	0/0:13,0:13:39.12:0,39,912	0/0:19,0:19:51.14:0,51,1218	1/1:0,20:20:54.19:2153,54,0	1/1:7,16:25:54.19:2051,54,0	0/0:31,0:31:90.28:0,90,2094	0/0:35,0:35:96.33:0,96,2422	0/0:18,0:18:48.16:0,48,1246	0/0:22,0:22:57.10:0,57,1277	0/0:25,0:25:72.25:0,72,1857	0/0:21,0:21:63.22:0,63,1598	0/0:32,0:32:93.26:0,93,2178	0/0:22,0:22:66.23:0,66,1684	0/0:38,0:38:99:0,111,2827	0/0:38,0:38:99:0,111,2871	0/0:30,0:30:87.28:0,87,2160	0/0:25,0:25:66.23:0,66,1644	0/0:18,0:18:48.14:0,48,1142	0/0:47,0:47:99:0,135,3385	0/0:29,0:29:81.27:0,81,2040	0/0:19,0:19:54.14:0,54,1235	0/0:24,0:24:63.20:0,63,1583	0/0:27,0:27:78.27:0,78,1994	0/0:31,0:31:90.31:0,90,2330	0/0:29,0:29:78.23:0,78,1859	0/0:14,0:14:39.13:0,39,1013
chr10	39250945	.	G	GT	1423.36	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.699;DP=708;FS=5.710;HRun=7;HaplotypeScore=82.7140;InbreedingCoeff=0.9999;MQ=84.74;MQ0=0;MQRankSum=-0.232;QD=27.91;ReadPosRankSum=-0.370;VQSLOD=4.0107;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,147,1416	0/0:15,0:15:45.07:0,45,434	0/0:23,0:23:51.03:0,51,482	0/0:23,0:23:48.05:0,48,456	0/0:23,0:23:60.08:0,60,572	1/1:3,25:28:72.21:861,72,0	1/1:1,22:23:57.17:684,57,0	0/0:29,0:29:69.97:0,70,664	0/0:24,0:24:69.11:0,69,666	0/0:16,0:16:39.05:0,39,373	0/0:15,0:15:40.65:0,41,363	0/0:26,0:26:72.11:0,72,695	0/0:28,0:28:66.07:0,66,629	0/0:15,0:15:45.07:0,45,435	0/0:30,0:30:81.12:0,81,782	0/0:29,0:29:84.12:0,84,805	0/0:29,0:29:84.13:0,84,811	0/0:33,0:33:96.07:0,96,910	0/0:19,0:19:48.05:0,48,458	0/0:21,0:21:57.98:0,58,551	0/0:31,0:31:87.11:0,87,833	0/0:32,0:32:87.09:0,87,827	0/0:17,0:17:42.06:0,42,404	0/0:21,0:21:60.10:0,60,579	0/0:27,0:27:57.06:0,57,550	0/0:29,0:29:69.10:0,69,666	0/0:30,0:28:75.08:0,75,711	0/0:17,0:17:51.08:0,51,492
chr10	39251394	.	C	CG	9919.03	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=2.766;DP=732;FS=12.781;HRun=0;HaplotypeScore=84.8537;InbreedingCoeff=0.9997;MQ=87.44;MQ0=0;MQRankSum=-3.392;QD=40.16;ReadPosRankSum=2.555;VQSLOD=4.4415;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,53:53:99:2192,141,0	0/0:9,0:9:27.06:0,27,341	0/0:26,0:27:68.73:0,69,818	0/0:26,0:26:61.17:0,61,773	0/0:20,0:20:54.12:0,54,683	1/1:0,27:27:69.23:1073,69,0	1/1:0,17:17:33.11:515,33,0	0/0:28,0:28:75.21:0,75,960	0/0:30,0:30:84.66:0,85,1100	1/1:0,28:28:84.29:1296,84,0	1/1:0,16:16:36.12:559,36,0	0/0:25,0:25:75.19:0,75,993	1/1:0,34:35:93.31:1427,93,0	1/1:0,23:23:61.09:937,61,0	0/0:31,0:31:87.26:0,87,1166	0/0:28,0:28:81.24:0,81,1109	0/0:42,0:42:99:0,123,1699	1/1:0,21:21:57.19:890,57,0	0/0:15,0:15:39.11:0,39,508	0/0:28,0:28:81.27:0,81,1129	0/0:43,0:43:99:0,117,1514	0/0:25,0:25:75.21:0,75,1009	0/0:25,0:25:72.24:0,72,1005	0/0:22,0:22:66.17:0,66,898	1/1:0,27:27:66.22:1030,66,0	0/0:23,0:23:66.20:0,66,877	0/0:27,0:27:81.18:0,81,1056	0/0:11,0:11:30.10:0,30,419
chr10	39251975	.	GAGA	G	1921.85	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=10.632;DP=741;FS=1.938;HRun=0;HaplotypeScore=111.2849;InbreedingCoeff=0.9988;MQ=88.98;MQ0=0;MQRankSum=-3.202;QD=30.03;ReadPosRankSum=1.715;VQSLOD=3.7124;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,108,2274	0/0:15,0:15:42.14:0,42,918	0/0:28,0:28:68.19:0,68,1316	0/0:29,0:29:65.91:0,66,1224	0/0:29,0:29:78.19:0,78,1577	1/1:0,25:25:45.15:704,45,0	1/1:2,12:14:27.09:427,27,0	0/0:35,0:35:87.29:0,87,1799	0/0:28,0:28:78.25:0,78,1665	0/0:30,0:30:84.25:0,84,1789	0/0:16,0:16:39.13:0,39,848	0/0:37,0:37:99:0,105,2212	0/0:20,0:20:60.21:0,60,1290	0/0:15,0:15:39.12:0,39,811	0/0:44,0:44:99:0,120,2603	0/0:32,0:32:90.30:0,90,1927	0/0:22,0:22:63.22:0,63,1371	0/0:21,0:21:60.21:0,60,1273	0/0:17,0:17:45.15:0,45,963	0/0:32,0:32:84.27:0,84,1754	0/0:40,0:40:99:0,114,2353	0/0:29,0:29:69.20:0,69,1403	0/0:18,0:18:48.16:0,48,1044	0/0:23,0:23:66.20:0,66,1400	1/1:1,24:25:60.20:934,60,0	0/0:26,0:26:72.24:0,72,1536	0/0:39,0:39:99:0,102,2121	0/0:9,0:9:24.07:0,24,458
chr10	39253494	.	T	TGCCACTGCACACCC	6176.46	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-3.755;DP=732;FS=3.263;HRun=0;HaplotypeScore=270.8392;InbreedingCoeff=0.9968;MQ=84.59;MQ0=0;MQRankSum=-8.734;QD=114.38;ReadPosRankSum=1.359;VQSLOD=4.6925;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,102,3834	0/0:8,0:8:24.08:0,24,968	0/0:28,0:29:66.27:0,66,2859	0/0:21,0:21:57.09:0,57,1937	0/0:25,0:25:69.22:0,69,2855	1/1:9,11:25:54.18:3430,54,0	1/1:7,9:29:39.13:2747,39,0	0/0:56,0:56:99:0,158,5707	0/0:13,0:13:39.11:0,39,1393	0/0:31,0:31:93.30:0,93,3470	0/0:23,0:23:69.24:0,69,2949	0/0:40,0:40:99:0,114,4428	0/0:22,0:22:66.23:0,66,2920	0/0:25,0:25:75.22:0,75,2976	0/0:45,0:45:99:0,132,5458	0/0:30,0:30:87.27:0,87,3591	0/0:30,0:30:87.26:0,87,3318	0/0:24,0:24:72.25:0,72,3176	0/0:18,0:18:51.18:0,51,2200	0/0:29,0:29:81.26:0,81,3214	0/0:29,0:29:84.21:0,84,2978	0/0:32,0:32:90.30:0,90,3694	0/0:18,0:18:51.15:0,51,1965	0/0:22,0:22:57.15:0,57,2329	0/0:23,0:23:66.21:0,66,2479	0/0:20,0:20:57.19:0,57,2397	0/0:22,0:22:66.21:0,66,2740	0/0:8,0:8:21.07:0,21,864
chr10	39253742	.	CGGGGGG	C	12596.43	PASS	AC=50;AF=0.926;AN=54;BaseQRankSum=-0.685;DP=458;FS=1.865;HRun=13;HaplotypeScore=131.6651;InbreedingCoeff=0.7563;MQ=58.71;MQ0=0;MQRankSum=-2.433;QD=28.63;ReadPosRankSum=3.160;VQSLOD=3.2157;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:12,20:32:14.99:301,15,0	1/1:1,5:6:12.04:235,12,0	0/0:8,0:8:5.85:0,6,169	0/0:9,0:6:3.17:0,3,108	1/1:1,19:20:32.56:558,33,0	1/1:6,0:15:24.51:286,25,0	1/1:2,0:18:21.02:250,21,0	1/1:3,12:15:29.70:484,30,0	1/1:0,12:12:24.05:467,24,0	1/1:2,16:18:44.88:810,45,0	1/1:2,13:15:30.02:543,30,0	1/1:3,13:16:30.09:586,30,0	1/1:0,14:14:32.26:644,32,0	1/1:2,18:20:36.07:676,36,0	1/1:2,18:20:39.12:763,39,0	1/1:5,9:13:24.07:469,24,0	1/1:8,20:28:42.01:780,42,0	1/1:2,17:19:36.04:663,36,0	1/1:4,18:22:41.66:634,42,0	1/1:1,6:7:12.02:235,12,0	1/1:12,27:39:24.21:389,24,0	1/1:0,12:12:27.09:528,27,0	1/1:3,12:15:20.99:339,21,0	1/1:4,15:19:15.03:293,15,0	./.	1/1:4,17:21:48.11:903,48,0	1/1:4,15:19:33.02:584,33,0	1/1:0,4:4:9.03:176,9,0
chr10	39253750	.	GGGGGGT	G	8213.27	PASS	AB=0.992;AC=40;AF=0.714;AN=56;BaseQRankSum=9.761;DP=443;FS=5.236;HRun=0;HaplotypeScore=137.8140;InbreedingCoeff=-0.1311;MQ=56.02;MQ0=0;MQRankSum=-6.393;QD=19.46;ReadPosRankSum=10.980;VQSLOD=2.2986;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:23:19.72:194,0,20	1/1:5,0:5:12.04:161,12,0	0/0:11,0:9:8.02:0,8,242	0/0:10,0:6:4.57:0,5,148	1/1:20,1:21:26.81:400,27,0	0/1:12,0:12:11.51:195,0,12	0/1:19,0:19:48.17:159,0,48	0/1:17,0:17:99:237,0,134	0/1:13,0:13:11.68:318,0,12	1/1:17,0:17:12.83:494,13,0	1/1:14,1:15:0.24:366,0,0	1/1:14,0:14:30.10:424,30,0	1/1:14,0:14:32.45:465,32,0	1/1:18,0:18:6.14:455,6,0	1/1:20,0:20:13.19:502,13,0	1/1:10,1:11:8.13:321,8,0	0/1:24,0:24:22.67:494,0,23	1/1:18,0:18:24.17:422,24,0	0/1:21,0:21:80.64:305,0,81	0/1:12,0:12:64.38:137,0,64	0/1:36,0:36:45.09:214,0,45	1/1:12,0:12:27.09:381,27,0	1/1:14,0:14:12.05:243,12,0	1/1:17,0:17:15.05:210,15,0	0/1:4,0:4:17.45:17,0,63	1/1:21,0:21:6.07:601,6,0	0/1:17,2:19:2.67:394,0,3	0/1:5,0:5:11.76:106,0,12
chr10	39254027	.	ACTAT	A	354.55	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.931;DP=624;FS=1.318;HRun=0;HaplotypeScore=104.9768;InbreedingCoeff=0.9950;MQ=83.08;MQ0=0;MQRankSum=-2.252;QD=22.16;ReadPosRankSum=0.395;VQSLOD=3.2054;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:75.24:0,75,1936	0/0:8,0:8:24.05:0,24,574	0/0:13,0:13:36.09:0,36,821	0/0:28,0:28:77.29:0,77,1741	0/0:29,0:29:78.25:0,78,1976	0/0:23,0:23:60.19:0,60,1459	0/0:17,0:17:51.18:0,51,1306	0/0:31,0:31:81.26:0,81,2053	0/0:25,0:25:72.23:0,72,1865	0/0:26,0:26:72.25:0,72,1885	0/0:11,0:11:30.10:0,30,799	0/0:23,0:23:57.18:0,57,1446	0/0:20,0:20:57.16:0,57,1373	0/0:20,0:20:60.21:0,60,1595	0/0:27,0:27:75.26:0,75,1988	0/0:23,0:23:66.20:0,66,1628	0/0:41,0:41:99:0,117,3001	0/0:29,0:29:87.28:0,87,2199	0/0:23,0:23:57.19:0,57,1506	0/0:13,0:13:33.11:0,33,871	0/0:25,0:25:72.23:0,72,1805	0/0:14,0:14:39.13:0,39,1032	0/0:17,0:17:48.16:0,48,1240	0/0:39,0:39:99:0,112,2956	1/1:1,15:16:24.08:448,24,0	0/0:19,0:19:54.18:0,54,1333	0/0:25,0:25:75.26:0,75,1974	0/0:14,0:14:42.13:0,42,1057
chr10	39255798	.	GCTA	G	8981.49	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=15.566;DP=724;FS=1.006;HRun=0;HaplotypeScore=108.2921;InbreedingCoeff=0.9987;MQ=85.90;MQ0=0;MQRankSum=-6.673;QD=41.01;ReadPosRankSum=2.348;VQSLOD=6.3121;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,40:42:93.32:1547,93,0	0/0:15,0:15:45.15:0,45,1019	0/0:22,0:22:54.18:0,54,1139	0/0:28,0:28:77.72:0,78,1557	0/0:10,0:10:30.10:0,30,677	1/1:1,21:22:57.19:947,57,0	1/1:1,34:35:90.31:1497,90,0	0/0:35,0:35:99:0,99,2213	0/0:41,0:41:99:0,120,2715	1/1:3,19:22:54.18:897,54,0	1/1:2,10:12:30.10:499,30,0	0/0:38,0:38:99:0,114,2510	1/1:0,22:22:57.18:949,57,0	1/1:0,30:30:84.29:1397,84,0	0/0:38,0:38:99:0,114,2572	0/0:22,0:22:66.23:0,66,1471	0/0:44,0:44:99:0,129,2833	1/1:0,18:18:38.81:649,39,0	0/0:18,0:18:48.16:0,48,1059	0/0:16,0:16:45.15:0,45,1014	0/0:70,0:70:99:0,202,4455	0/0:7,0:7:21.07:0,21,475	0/0:9,0:9:24.07:0,24,500	0/0:34,0:34:99:0,99,2239	1/1:0,16:16:36.59:599,37,0	0/0:22,0:22:60.20:0,60,1317	0/0:26,0:25:78.27:0,78,1765	0/0:10,0:10:27.09:0,27,611
chr10	39256924	.	G	GCCGA	5365.64	PASS	AB=0.591;AC=15;AF=0.268;AN=56;BaseQRankSum=10.113;DP=581;FS=17.437;HRun=0;HaplotypeScore=91.4465;InbreedingCoeff=0.8890;MQ=56.05;MQ0=3;MQRankSum=-9.106;QD=57.08;ReadPosRankSum=-0.760;VQSLOD=4.8975;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,19:22:45.15:1240,45,0	0/0:10,0:10:27.09:0,27,539	0/0:26,0:13:33.11:0,33,626	0/0:34,0:25:66.16:0,66,1215	0/0:22,0:22:54.19:0,54,1077	1/1:2,8:11:27.09:748,27,0	1/1:1,6:9:18.06:497,18,0	0/0:37,0:37:99:0,108,2070	0/0:23,0:23:69.24:0,69,1366	1/1:3,5:10:30.07:667,30,0	1/1:0,9:9:15.05:418,15,0	0/0:24,0:24:63.13:0,63,1169	1/1:2,9:13:30.10:782,30,0	0/1:4,8:13:13.13:848,0,13	0/0:30,0:30:87.26:0,87,1678	0/0:26,0:26:72.20:0,72,1336	0/0:29,0:29:69.24:0,69,1350	1/1:0,3:3:6.02:166,6,0	0/0:25,0:25:75.26:0,75,1498	0/0:21,0:21:54.16:0,54,1008	0/0:49,0:49:99:0,147,2766	0/0:19,0:19:48.11:0,48,882	0/0:15,0:15:39.10:0,39,718	0/0:17,0:17:42.14:0,42,818	0/0:9,0:9:27.09:0,27,532	0/0:28,0:28:84.25:0,84,1597	0/0:29,0:28:81.26:0,81,1580	0/0:13,0:13:30.08:0,30,548
chr10	39257431	.	T	TAAG	2439.83	PASS	AB=0.941;AC=19;AF=0.352;AN=54;BaseQRankSum=3.272;DP=223;FS=0.000;HRun=0;HaplotypeScore=51.9863;InbreedingCoeff=0.7424;MQ=53.36;MQ0=4;MQRankSum=-7.245;QD=30.88;ReadPosRankSum=-0.716;VQSLOD=2.7884;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,5:5:14.97:292,15,0	0/0:3,0:3:8.96:0,9,120	0/0:9,0:2:6:0,6,60	0/1:14,0:7:28.23:28,0,37	0/0:8,0:8:11.89:0,12,137	1/1:1,7:7:17.98:361,18,0	1/1:3,1:3:3.01:69,3,0	0/0:22,0:20:60.19:0,60,979	0/0:5,0:5:12.04:0,12,204	1/1:3,8:11:27.05:569,27,0	1/1:1,4:5:3.01:69,3,0	0/0:6,0:6:12.04:0,12,204	1/1:1,6:6:3.01:69,3,0	1/1:2,7:8:21:428,21,0	0/0:5,0:5:12.04:0,12,204	0/0:9,0:8:15:0,15,223	0/0:16,0:16:30.10:0,30,510	1/1:0,6:6:12.04:276,12,0	0/0:8,0:8:24.08:0,24,409	0/0:9,0:9:27.02:0,27,428	0/0:6,0:6:3.01:0,3,51	./.	0/0:8,0:8:20.90:0,21,289	0/0:4,0:4:12.04:0,12,204	1/1:1,7:8:24.01:469,24,0	0/0:10,0:9:27.09:0,27,460	0/0:12,0:11:33.10:0,33,534	0/0:4,0:4:12.04:0,12,204
chr10	39257461	.	AAAAAAAC	A	2317.63	PASS	AB=0.956;AC=31;AF=0.554;AN=56;BaseQRankSum=-7.831;DP=336;FS=43.426;HRun=0;HaplotypeScore=96.2308;InbreedingCoeff=0.6489;MQ=69.95;MQ0=14;MQRankSum=-0.188;QD=13.71;ReadPosRankSum=2.988;VQSLOD=0.6747;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:7:17.94:0,18,184	1/1:3,1:4:10.45:119,10,0	0/0:43,0:13:31.39:0,31,387	0/0:49,0:24:33.17:0,33,397	1/1:10,0:10:14.25:170,14,0	0/0:8,0:7:18.01:0,18,381	0/0:7,0:7:17.34:0,17,357	1/1:21,0:21:39.71:331,40,0	1/1:3,0:3:9.03:102,9,0	0/0:14,0:14:36.11:0,36,459	0/0:7,0:6:11.98:0,12,133	1/1:7,0:7:15.26:124,15,0	0/0:5,0:5:2.94:0,3,18	0/0:9,0:8:21.07:0,21,281	1/1:5,1:6:0.50:113,0,0	1/1:9,1:9:14.91:184,15,0	1/1:23,0:23:6.02:68,6,0	0/0:8,0:8:20.72:0,21,201	0/1:11,2:12:1.56:216,0,2	0/1:11,0:10:7.42:69,0,7	1/1:9,0:9:3.01:34,3,0	1/1:4,0:4:3:29,3,0	1/1:5,0:5:9.03:109,9,0	0/1:6,0:6:9.02:52,0,9	0/0:9,0:9:25.32:0,25,333	1/1:10,0:10:23.33:200,23,0	1/1:19,1:19:37.66:440,38,0	1/1:6,1:7:2.54:157,3,0
chr10	39257462	.	AAAAAAC	A	4126.86	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-10.060;DP=333;FS=42.978;HRun=0;HaplotypeScore=86.1704;InbreedingCoeff=0.8390;MQ=70.14;MQ0=14;MQRankSum=0.576;QD=25.16;ReadPosRankSum=2.244;VQSLOD=1.5215;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:7:17.85:0,18,132	1/1:3,1:4:12.02:163,12,0	0/0:43,0:13:31.42:0,31,345	0/0:49,0:24:23.73:0,24,301	1/1:2,8:10:17.73:266,18,0	0/0:8,0:7:15.41:0,15,287	0/0:8,0:7:5.41:0,5,288	1/1:5,16:21:51.43:602,51,0	1/1:0,3:3:9.03:181,9,0	0/0:14,0:14:35.86:0,36,314	0/0:7,0:6:11.95:0,12,94	1/1:5,2:7:16.07:175,16,0	0/0:5,0:5:1.82:0,2,6	0/0:10,0:9:23.98:0,24,221	1/1:5,1:6:14.38:193,14,0	1/1:3,7:9:15.05:258,15,0	1/1:2,19:21:6.02:121,6,0	0/0:8,0:8:20.84:0,21,173	1/1:10,3:12:17.06:346,17,0	1/1:10,1:10:15.91:157,16,0	1/1:1,8:9:3.01:60,3,0	1/1:0,4:4:3.01:55,3,0	1/1:0,5:5:9.03:181,9,0	1/1:5,1:6:8.12:95,8,0	0/0:10,0:10:24.71:0,25,248	1/1:2,7:9:23.97:305,24,0	1/1:4,16:19:39.13:736,39,0	1/1:2,3:5:13.60:233,14,0
chr10	39257463	.	AAAAAC	A	3180.62	PASS	AB=1.000;AC=37;AF=0.661;AN=56;BaseQRankSum=-9.101;DP=335;FS=36.254;HRun=0;HaplotypeScore=86.0401;InbreedingCoeff=0.7822;MQ=69.96;MQ0=14;MQRankSum=0.777;QD=18.07;ReadPosRankSum=2.309;VQSLOD=1.6436;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:7:16.65:0,17,84	1/1:4,0:4:12.03:165,12,0	0/0:43,0:13:22.67:0,23,280	0/0:51,0:25:24.21:0,24,285	1/1:10,0:10:16.92:184,17,0	0/0:9,0:8:19.92:0,20,254	0/1:8,0:7:9.92:10,0,216	1/1:18,3:21:53.43:598,53,0	1/1:3,0:3:9.03:127,9,0	0/0:14,0:14:32.16:0,32,171	0/0:7,0:6:11.30:0,11,58	1/1:7,0:7:12.83:130,13,0	1/1:4,0:4:1.85:6,2,0	0/0:10,0:9:22.56:0,23,137	1/1:5,1:6:17.17:186,17,0	1/1:9,1:9:15.05:223,15,0	1/1:21,0:21:6.02:85,6,0	0/0:8,0:8:19.63:0,20,126	1/1:13,0:12:27.07:283,27,0	1/1:11,0:10:17.11:167,17,0	1/1:9,0:9:3.01:42,3,0	1/1:4,0:4:3.01:37,3,0	1/1:5,0:5:9.03:127,9,0	1/1:6,0:6:7.30:73,7,0	0/0:10,0:10:21.27:0,21,149	1/1:9,0:9:23.89:234,24,0	1/1:20,0:19:38.86:515,39,0	1/1:5,0:5:15.04:194,15,0
chr10	39257467	.	AC	A	1970.96	PASS	AB=1.000;AC=36;AF=0.643;AN=56;BaseQRankSum=-6.449;DP=322;FS=23.965;HRun=1;HaplotypeScore=73.2845;InbreedingCoeff=0.7251;MQ=72.46;MQ0=13;MQRankSum=-0.362;QD=11.87;ReadPosRankSum=0.861;VQSLOD=0.6373;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:6:12.06:0,12,51	1/1:3,1:4:11.89:86,12,0	0/0:39,3:13:19.05:0,19,134	0/0:47,2:25:7.28:0,7,112	1/1:8,1:9:17.79:120,18,0	0/0:5,0:8:10.50:0,10,58	0/1:4,0:7:8.70:9,0,45	1/1:19,0:19:56.58:422,57,0	1/1:3,0:3:8.87:56,9,0	0/0:14,0:14:7.51:0,8,40	0/0:6,0:5:7.61:0,8,30	1/1:6,1:7:17.81:128,18,0	0/1:5,0:5:2.89:3,0,18	0/0:9,0:9:15.68:0,16,61	1/1:6,0:6:17.23:115,17,0	1/1:9,0:9:14.78:94,15,0	1/1:19,2:21:5.94:40,6,0	0/0:8,0:8:18.35:0,18,97	1/1:13,0:12:32.32:224,32,0	1/1:10,0:9:23.83:181,24,0	1/1:8,0:8:2.96:19,3,0	1/1:4,0:4:2.97:20,3,0	1/1:5,0:5:8.87:57,9,0	1/1:3,1:4:8.96:72,9,0	0/0:13,0:13:13.99:0,14,134	1/1:7,1:8:23.82:176,24,0	1/1:17,1:18:38.46:249,38,0	1/1:5,0:5:14.81:101,15,0
chr10	39257471	.	AAAAAC	A	436.71	PASS	AB=0.947;AC=27;AF=0.482;AN=56;BaseQRankSum=0.983;DP=337;FS=30.910;HRun=0;HaplotypeScore=97.4507;InbreedingCoeff=0.3737;MQ=70.76;MQ0=13;MQRankSum=-5.018;QD=2.70;ReadPosRankSum=7.612;VQSLOD=-0.1887;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:7:21.07:0,21,341	1/1:3,0:3:8.13:62,8,0	0/0:38,0:12:10.38:0,10,331	0/0:47,0:24:41.68:0,42,509	1/1:9,0:9:6.64:44,7,0	0/0:9,0:8:21.07:0,21,500	0/0:10,0:9:25.64:0,26,520	0/1:25,0:25:18.47:18,0,300	1/1:3,0:3:7.62:31,8,0	0/0:15,0:15:39.13:0,39,698	0/0:7,0:6:15.05:0,15,252	1/1:5,0:5:5.58:26,6,0	0/0:5,0:5:6.01:0,6,93	0/0:9,0:9:24.08:0,24,464	0/1:8,0:8:6.97:7,0,71	1/1:9,0:9:10.61:48,11,0	0/1:22,2:24:28.89:29,0,127	0/0:8,0:8:18.06:0,18,362	0/1:14,0:13:61.23:61,0,81	1/1:7,0:6:1.74:13,2,0	1/1:8,0:8:2.04:6,2,0	0/1:5,0:5:7.50:8,0,36	1/1:5,0:5:6.54:26,7,0	0/1:3,1:4:0.66:1,0,9	0/0:20,0:20:57.19:0,57,1029	0/1:9,1:10:43.42:43,0,69	1/1:17,1:18:30.42:143,30,0	1/1:5,0:5:1.30:53,1,0
chr10	39257501	.	G	GA	1005.39	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=4.623;DP=308;FS=0.000;HRun=7;HaplotypeScore=66.1743;InbreedingCoeff=0.8267;MQ=64.89;MQ0=2;MQRankSum=-4.100;QD=11.97;ReadPosRankSum=0.459;VQSLOD=2.2927;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,7:10:20.72:248,21,0	0/0:5,0:5:9.01:0,9,87	0/0:7,0:4:9.01:0,9,86	0/1:16,0:12:14.04:14,0,23	0/0:6,0:6:15.02:0,15,145	1/1:2,0:8:14.68:72,15,0	1/1:5,0:13:25.69:134,26,0	0/0:33,0:33:96.15:0,96,927	0/0:4,0:4:12.02:0,12,114	1/1:6,7:14:20.89:227,21,0	1/1:5,5:10:15.52:178,16,0	0/0:8,0:8:21.03:0,21,203	0/0:9,0:8:11.27:0,11,57	0/0:11,0:11:20.12:0,20,134	0/0:8,0:8:21.03:0,21,203	0/0:7,0:7:15.02:0,15,145	0/0:23,0:23:27.04:0,27,261	1/1:1,12:13:27.08:319,27,0	0/0:13,0:13:30.04:0,30,289	0/0:5,0:5:15.02:0,15,145	0/0:7,0:7:9.01:0,9,86	0/0:9,0:9:18.02:0,18,169	0/0:4,0:4:12.02:0,12,116	0/0:5,0:5:15.02:0,15,145	0/0:23,0:23:60.43:0,60,341	0/0:11,0:11:27.04:0,27,261	0/0:22,0:22:42.03:0,42,399	0/0:4,0:4:12.02:0,12,116
chr10	39257710	.	T	TG	584.62	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-3.081;DP=575;FS=0.000;HRun=2;HaplotypeScore=62.1000;InbreedingCoeff=0.9576;MQ=87.55;MQ0=0;MQRankSum=-2.785;QD=27.84;ReadPosRankSum=0.445;VQSLOD=3.1232;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:78.24:0,78,966	0/0:4,0:4:12.01:0,12,133	0/0:20,0:20:57.15:0,57,672	0/0:27,0:27:80.69:0,81,955	0/0:13,0:13:39.11:0,39,470	0/0:18,0:18:51.14:0,51,618	0/0:20,0:20:51.16:0,51,632	0/0:36,0:36:99:0,102,1255	0/0:16,0:16:45.11:0,45,532	0/0:22,0:22:63.19:0,63,772	0/0:9,0:9:21.07:0,21,260	0/0:28,0:28:78.24:0,78,961	0/0:19,0:19:51.13:0,51,616	0/0:18,0:18:54.15:0,54,654	0/0:24,0:24:66.19:0,66,806	0/0:25,0:24:72.21:0,72,869	0/0:32,0:32:93.29:0,93,1151	0/0:21,0:21:57.16:0,57,691	0/0:11,0:11:33.10:0,33,398	0/0:9,0:9:27.08:0,27,333	0/0:48,0:48:99:0,138,1642	0/0:7,0:7:18.06:0,18,223	0/0:16,0:16:45.14:0,45,556	0/0:21,0:21:63.20:0,63,781	1/1:1,20:21:48.16:679,48,0	0/0:19,0:19:54.17:0,54,669	0/0:26,0:26:72.17:0,72,852	0/0:17,0:17:51.16:0,51,632
chr10	39259035	.	C	CATAT	2261.48	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-4.969;DP=814;FS=0.633;HRun=0;HaplotypeScore=131.7613;InbreedingCoeff=0.9986;MQ=90.75;MQ0=0;MQRankSum=-1.520;QD=47.11;ReadPosRankSum=-0.328;VQSLOD=4.0355;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,99,1715	0/0:10,0:10:27.09:0,27,485	0/0:33,0:34:47.84:0,48,836	0/0:37,0:37:66.49:0,66,1171	0/0:33,0:33:90.27:0,90,1529	1/1:1,29:30:63.22:1622,63,0	1/1:3,15:18:30.10:761,30,0	0/0:37,0:37:99:0,99,1511	0/0:34,0:34:99:0,99,1676	0/0:26,0:26:72.23:0,72,1243	0/0:11,0:11:27.06:0,27,417	0/0:21,0:21:57.16:0,57,963	0/0:36,0:36:96.28:0,96,1636	0/0:42,0:42:99:0,120,2031	0/0:47,0:47:99:0,129,2228	0/0:43,0:43:99:0,117,2059	0/0:21,0:21:48.14:0,48,829	0/0:25,0:25:60.21:0,60,1077	0/0:27,0:27:63.18:0,63,1009	0/0:22,0:22:57.15:0,57,934	0/0:39,0:39:99:0,108,1875	0/0:28,0:28:72.21:0,72,1204	0/0:27,0:27:69.22:0,69,1203	0/0:20,0:20:48.16:0,48,861	0/0:22,0:22:63.19:0,63,1062	0/0:32,0:32:93.27:0,93,1532	0/0:39,0:38:99:0,108,1832	0/0:14,0:14:39.10:0,39,640
chr10	39259747	.	AT	A	1220.51	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=4.551;DP=559;FS=12.866;HRun=1;HaplotypeScore=63.6629;InbreedingCoeff=0.9994;MQ=67.04;MQ0=1;MQRankSum=-2.030;QD=31.30;ReadPosRankSum=-0.100;VQSLOD=1.9037;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:72.25:0,72,1145	0/0:12,0:12:36.08:0,36,525	0/0:21,0:20:48.19:0,48,810	0/0:23,0:22:52.03:0,52,894	0/0:10,0:10:30.10:0,30,479	1/1:0,15:15:36.09:503,36,0	1/1:0,24:24:60.20:839,60,0	0/0:21,0:21:60.20:0,60,958	0/0:15,0:15:42.14:0,42,671	0/0:19,0:19:48.16:0,48,765	0/0:17,0:17:48.16:0,48,767	0/0:26,0:26:75.26:0,75,1195	0/0:20,0:20:60.20:0,60,954	0/0:21,0:21:63.20:0,63,973	0/0:28,0:28:81.26:0,81,1268	0/0:31,0:31:90.31:0,90,1430	0/0:21,0:21:60.20:0,60,953	0/0:22,0:22:63.21:0,63,1007	0/0:24,0:24:72.23:0,72,1127	0/0:24,0:24:63.21:0,63,999	0/0:18,0:18:54.18:0,54,863	0/0:16,0:16:48.16:0,48,767	0/0:12,0:12:33.11:0,33,519	0/0:26,0:26:69.23:0,69,1091	0/0:17,0:17:51.17:0,51,801	0/0:17,0:17:51.17:0,51,816	0/0:20,0:20:60.19:0,60,924	0/0:13,0:13:39.13:0,39,619
chr10	39259822	.	GA	G	12513.77	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-1.346;DP=573;FS=26.141;HRun=8;HaplotypeScore=116.9386;InbreedingCoeff=0.8093;MQ=66.84;MQ0=5;MQRankSum=-4.830;QD=25.28;ReadPosRankSum=4.812;VQSLOD=3.3137;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,21:27:57.08:549,57,0	1/1:3,9:12:1.89:231,2,0	0/0:42,1:30:18.57:0,19,462	0/0:33,1:22:4.06:0,4,248	1/1:3,24:27:69.11:665,69,0	1/1:0,20:20:60.10:579,60,0	1/1:4,16:20:54.07:515,54,0	1/1:3,17:20:51.07:492,51,0	1/1:2,9:11:33.01:305,33,0	1/1:3,25:28:75.12:729,75,0	1/1:2,19:21:60.10:579,60,0	1/1:0,26:26:78.13:752,78,0	1/1:1,17:18:51.08:492,51,0	1/1:4,14:18:48.07:463,48,0	1/1:3,16:19:54.08:519,54,0	1/1:3,19:22:57.09:550,57,0	1/1:4,23:26:69.11:666,69,0	1/1:6,11:17:33.05:318,33,0	1/1:4,12:15:36.05:348,36,0	1/1:1,19:20:54.08:521,54,0	1/1:1,6:7:15.02:145,15,0	1/1:0,13:13:39.06:377,39,0	1/1:1,19:20:57.09:550,57,0	1/1:2,11:12:25.59:236,26,0	1/1:5,25:30:78.12:752,78,0	1/1:3,14:17:48.06:457,48,0	1/1:1,18:19:54.08:521,54,0	1/1:0,7:7:21.03:203,21,0
chr10	39259841	.	AAG	A	1237.52	PASS	AB=0.975;AC=18;AF=0.321;AN=56;BaseQRankSum=-1.109;DP=605;FS=2.636;HRun=0;HaplotypeScore=173.7567;InbreedingCoeff=-0.2219;MQ=63.09;MQ0=5;MQRankSum=-4.481;QD=4.06;ReadPosRankSum=5.985;VQSLOD=2.6785;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:33.26:0,33,215	0/1:10,2:12:42.59:109,0,43	0/0:42,0:29:21.44:0,21,297	0/0:27,0:18:20.66:0,21,188	0/1:28,0:28:51.23:140,0,51	0/0:21,0:21:58.35:0,58,274	0/0:21,0:21:59:0,59,318	0/1:32,1:33:73.34:73,0,133	1/1:13,0:13:0.93:64,1,0	0/0:37,0:37:33.84:0,34,118	0/0:24,0:24:8:0,8,73	0/1:26,0:26:80.55:147,0,81	0/0:18,0:18:22.45:0,22,126	0/0:14,0:14:14.03:0,14,96	1/1:20,0:20:19.79:153,20,0	0/1:18,1:19:61.15:94,0,61	0/1:27,0:26:31.73:132,0,32	0/0:16,0:16:10.99:0,11,44	0/0:17,0:17:5.60:0,6,177	0/1:16,0:16:59.59:91,0,60	0/1:10,0:10:20.10:20,0,45	0/1:17,0:17:56.67:95,0,57	0/1:19,0:19:78.34:79,0,78	0/1:12,2:12:25.24:68,0,25	0/0:30,0:30:16.29:0,16,77	0/1:19,0:19:59.59:60,0,153	0/1:23,0:23:58.88:59,0,84	0/1:9,0:9:18.82:19,0,65
chr10	39259843	.	GAA	G	7344.57	PASS	AB=0.611;AC=48;AF=0.857;AN=56;BaseQRankSum=-3.342;DP=601;FS=2.590;HRun=13;HaplotypeScore=152.8540;InbreedingCoeff=0.4768;MQ=65.48;MQ0=5;MQRankSum=-3.316;QD=13.86;ReadPosRankSum=4.232;VQSLOD=2.6008;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,0:31:32.03:173,32,0	1/1:6,7:13:23.68:214,24,0	0/0:41,0:27:24.21:0,24,199	0/0:29,1:19:14.71:0,15,116	1/1:5,22:27:62.53:576,63,0	0/1:1,0:21:5:9,0,5	0/1:6,0:21:15.08:17,0,15	1/1:11,21:33:28.19:586,28,0	1/1:1,12:13:30.04:290,30,0	1/1:2,0:34:90.44:392,90,0	1/1:3,0:24:31.34:175,31,0	1/1:4,21:25:60.08:580,60,0	1/1:6,0:18:36.82:153,37,0	1/1:4,0:14:25.15:108,25,0	1/1:2,20:22:50.95:480,51,0	1/1:6,13:19:42.02:406,42,0	1/1:6,20:26:59.78:556,60,0	1/1:1,0:16:21.88:95,22,0	1/1:8,10:19:32.66:283,33,0	1/1:4,10:15:20.92:303,21,0	1/1:2,7:9:5.94:58,6,0	1/1:9,8:17:39.01:375,39,0	1/1:3,15:19:38.71:361,39,0	1/1:11,3:12:17.55:154,18,0	1/1:2,0:30:63.02:273,63,0	0/1:11,7:19:1.02:265,0,1	1/1:2,16:21:29.06:347,29,0	0/1:4,5:9:12.15:118,0,12
chr10	39260615	.	G	GAAACCCTGTTTTGAA	4313.87	PASS	AB=0.923;AC=11;AF=0.196;AN=56;BaseQRankSum=-1.066;DP=529;FS=3.247;HRun=0;HaplotypeScore=228.2701;InbreedingCoeff=0.8400;MQ=60.76;MQ0=8;MQRankSum=-7.065;QD=65.36;ReadPosRankSum=-1.710;VQSLOD=3.9528;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:15:26.21:1360,26,0	0/0:10,0:10:26.91:0,27,569	0/0:46,0:27:74.40:0,74,2164	0/0:50,0:22:34.42:0,34,1344	0/0:20,0:20:44.51:0,45,857	0/0:16,0:16:32.12:0,32,1142	0/0:13,0:13:39.13:0,39,1153	0/0:25,0:24:70.09:0,70,2754	0/0:20,0:20:24:0,24,676	1/1:0,3:6:11.69:468,12,0	1/1:1,9:13:8.99:346,9,0	0/0:22,0:22:23.92:0,24,633	1/1:3,6:16:10.28:411,10,0	0/1:11,1:12:4.66:1499,0,5	0/0:16,0:16:36.25:0,36,1562	0/0:20,0:20:16.17:0,16,382	0/0:18,0:18:53.77:0,54,2054	1/1:0,3:4:3.01:228,3,0	0/0:22,0:21:57.06:0,57,1992	0/0:23,0:23:47.92:0,48,1099	0/0:17,0:17:44.11:0,44,1577	0/0:19,0:19:35.72:0,36,671	0/0:12,0:12:31.20:0,31,600	0/0:21,0:21:45.09:0,45,1679	0/0:12,0:12:26.83:0,27,990	0/0:21,0:21:33.05:0,33,1937	0/0:31,0:31:79.58:0,80,2809	0/0:9,0:8:24.01:0,24,902
chr10	39260617	.	A	AACCCTGTTTTG	3135.95	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=2.900;DP=507;FS=1.654;HRun=0;HaplotypeScore=190.1730;InbreedingCoeff=0.8812;MQ=61.15;MQ0=9;MQRankSum=-7.261;QD=54.07;ReadPosRankSum=-1.298;VQSLOD=3.3130;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,6:15:24.26:1082,24,0	0/0:9,0:9:18:0,18,453	0/0:43,0:24:66.17:0,66,1809	0/0:49,0:21:45.94:0,46,1181	0/0:20,0:20:41.73:0,42,553	0/0:15,0:15:24.08:0,24,1121	0/0:13,0:13:39.13:0,39,1245	0/0:26,0:25:75.02:0,75,2378	0/0:18,0:19:20.96:0,21,575	1/1:3,0:3:6.02:236,6,0	1/1:11,0:11:6.02:257,6,0	0/0:21,0:21:18.05:0,18,515	1/1:12,0:12:9.03:370,9,0	1/1:11,3:13:9.71:1199,10,0	0/0:16,0:16:45.11:0,45,1329	0/0:20,0:20:12:0,12,313	0/0:18,0:18:54.14:0,54,1765	1/1:3,0:3:3.01:155,3,0	0/0:21,0:20:56.78:0,57,1742	0/0:22,0:22:41.92:0,42,889	0/0:17,0:17:44.94:0,45,1266	0/0:19,0:19:30.29:0,30,535	0/0:11,0:11:21.31:0,21,403	0/0:20,0:20:42.53:0,43,1301	0/0:12,0:12:25.80:0,26,793	0/0:20,0:20:53.13:0,53,1623	0/0:29,0:29:76.80:0,77,2259	0/0:9,0:8:24.07:0,24,787
chr10	39260623	.	AGAGAGAGAGAG	A	1213.50	PASS	AB=1.000;AC=22;AF=0.393;AN=56;BaseQRankSum=9.785;DP=513;FS=14.832;HRun=0;HaplotypeScore=182.5006;InbreedingCoeff=0.1760;MQ=55.71;MQ0=13;MQRankSum=-7.267;QD=4.99;ReadPosRankSum=-1.272;VQSLOD=1.8519;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:14:4.75:163,5,0	0/1:9,0:9:8.03:8,0,67	0/0:38,0:19:47.11:0,47,982	0/0:44,0:17:23.06:0,23,547	0/0:24,0:24:17.77:0,18,244	1/1:10,4:14:19.83:431,20,0	1/1:11,0:11:0.19:25,0,0	0/0:22,0:21:63:0,63,922	0/1:18,0:18:26.74:27,0,164	0/1:3,0:3:3.79:38,0,4	1/1:12,0:12:6:58,6,0	0/0:19,0:19:12.04:0,12,219	1/1:12,0:12:9.01:165,9,0	1/1:10,0:9:8.87:134,9,0	0/1:17,0:17:48.46:48,0,484	0/1:22,0:22:32.99:33,0,111	0/0:19,0:18:48.09:0,48,734	0/1:6,0:5:33.78:34,0,82	0/0:20,0:18:51.10:0,51,669	0/1:24,0:24:24.82:25,0,331	0/0:17,0:17:29.69:0,30,401	0/1:22,0:21:52.21:52,0,130	0/0:18,0:17:13.13:0,13,209	0/0:22,0:22:35.99:0,36,668	0/0:18,0:18:29.68:0,30,606	0/1:19,0:19:13.24:13,0,485	0/1:29,0:29:99:138,0,648	0/0:9,0:8:23.81:0,24,292
chr10	39260626	.	GAGAGAGAGAGAA	G	4234.99	PASS	AB=0.935;AC=39;AF=0.722;AN=54;BaseQRankSum=-3.092;DP=508;FS=16.362;HRun=0;HaplotypeScore=174.7687;InbreedingCoeff=0.2491;MQ=53.33;MQ0=14;MQRankSum=1.854;QD=11.06;ReadPosRankSum=0.903;VQSLOD=2.9474;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:14:2.97:0,3,11	1/1:7,0:7:5.93:91,6,0	0/0:38,0:19:15:0,15,134	0/0:40,0:14:5.39:0,5,53	1/1:27,0:27:8.75:60,9,0	1/1:13,0:13:20.21:381,20,0	./.	1/1:21,0:20:35.83:282,36,0	0/1:21,0:21:5.23:149,0,5	1/1:3,0:3:2.84:14,3,0	1/1:12,0:12:2.75:20,3,0	0/0:20,0:20:3:0,3,26	1/1:12,0:12:5.56:54,6,0	0/1:10,0:9:0.01:0,0,0	1/1:17,0:17:26.79:368,27,0	1/1:23,0:23:6.02:143,6,0	1/1:17,0:16:14.56:118,15,0	0/1:6,0:5:6.24:6,0,35	1/1:18,0:16:27.01:259,27,0	0/1:4,20:24:22.47:185,0,22	1/1:17,0:16:22.12:190,22,0	1/1:22,0:21:10.39:198,10,0	0/1:21,0:20:14.39:14,0,20	0/1:21,0:21:81.73:87,0,82	0/1:17,0:17:18.10:18,0,185	1/1:18,2:20:56.73:680,57,0	1/1:22,4:26:53.87:783,54,0	1/1:8,0:7:14.90:134,15,0
chr10	39260630	.	GAGAGAGAA	G	4154.03	PASS	AB=1.000;AC=46;AF=0.852;AN=54;BaseQRankSum=-2.327;DP=502;FS=18.679;HRun=0;HaplotypeScore=152.6190;InbreedingCoeff=0.3394;MQ=50.80;MQ0=17;MQRankSum=2.836;QD=9.84;ReadPosRankSum=0.758;VQSLOD=1.0036;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:13:0.48:2,0,0	1/1:7,0:7:5.93:91,6,0	0/0:31,0:12:14.79:0,15,134	0/0:39,0:13:5.34:0,5,53	1/1:3,24:27:3.23:66,3,0	1/1:13,0:13:20.99:287,21,0	./.	1/1:17,0:16:38.80:302,39,0	0/1:24,0:23:2.78:117,0,3	1/1:3,0:3:5.44:24,5,0	1/1:12,0:12:1.34:3,1,0	1/1:19,0:19:2.46:11,2,0	1/1:12,0:12:5.39:34,5,0	0/1:10,0:9:1.14:3,0,1	1/1:17,1:18:35.96:461,36,0	1/1:24,0:24:6.02:106,6,0	1/1:19,0:18:41.73:316,42,0	0/1:6,0:5:6.85:7,0,9	1/1:20,0:18:41.72:313,42,0	1/1:23,0:23:11.85:124,12,0	1/1:17,0:16:26.55:225,27,0	1/1:4,18:21:3.53:152,4,0	1/1:21,0:20:8.35:55,8,0	1/1:21,0:21:20.07:147,20,0	0/1:16,0:16:20.02:20,0,73	1/1:22,0:22:62.67:554,63,0	1/1:25,0:25:56.79:627,57,0	1/1:10,0:7:14.89:109,15,0
chr10	39260632	.	GAGAGAA	G	3962.54	PASS	AB=1.000;AC=48;AF=0.889;AN=54;BaseQRankSum=-2.637;DP=505;FS=27.246;HRun=0;HaplotypeScore=145.1265;InbreedingCoeff=0.3169;MQ=50.57;MQ0=18;MQRankSum=3.488;QD=9.19;ReadPosRankSum=2.381;VQSLOD=1.2988;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:13:2.12:13,2,0	1/1:8,0:8:5.93:58,6,0	0/0:28,0:12:15:0,15,134	0/0:36,0:11:5.40:0,5,53	1/1:26,0:26:10.05:56,10,0	1/1:13,0:13:20.99:235,21,0	./.	1/1:17,0:16:38.80:302,39,0	0/1:25,0:24:1.58:57,0,2	1/1:3,0:3:5.78:32,6,0	1/1:12,0:12:2.53:12,3,0	1/1:20,0:20:2.89:54,3,0	1/1:12,0:12:4.77:25,5,0	1/1:11,0:10:3.07:11,3,0	1/1:17,0:17:35.63:359,36,0	1/1:3,21:24:6.02:101,6,0	1/1:19,0:18:41.74:316,42,0	1/1:6,0:5:0.31:8,0,0	1/1:20,0:18:41.72:313,42,0	1/1:22,0:22:14.82:122,15,0	1/1:18,0:16:26.22:224,26,0	1/1:22,0:21:10.55:103,11,0	1/1:23,0:22:0.59:44,1,0	1/1:22,0:21:26.02:232,26,0	0/1:16,0:16:8.90:28,0,9	1/1:24,0:24:68.52:556,69,0	1/1:27,0:27:62.74:594,63,0	1/1:10,0:7:14.89:109,15,0
chr10	39260634	.	GAGAA	G	4008.62	PASS	AB=0.878;AC=46;AF=0.821;AN=56;BaseQRankSum=-2.473;DP=523;FS=11.397;HRun=0;HaplotypeScore=150.0096;InbreedingCoeff=0.3642;MQ=49.71;MQ0=17;MQRankSum=3.778;QD=8.95;ReadPosRankSum=3.011;VQSLOD=2.0974;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:19,0:18:6.74:7,0,17	1/1:0,8:8:5.93:70,6,0	0/0:24,0:9:15:0,15,134	0/0:35,0:10:5.69:0,6,53	1/1:26,0:26:11.40:63,11,0	1/1:17,0:17:24.36:175,24,0	1/1:15,0:15:4.06:9,4,0	1/1:17,0:16:38.80:303,39,0	0/1:1,23:24:2.64:104,0,3	1/1:6,0:6:5.30:32,5,0	0/0:16,0:16:6.28:0,6,21	1/1:21,0:21:2.97:22,3,0	1/1:13,0:13:4.84:29,5,0	1/1:10,0:9:3.84:21,4,0	1/1:15,1:16:35.84:346,36,0	1/1:24,0:24:6.02:93,6,0	1/1:18,0:17:41.74:316,42,0	0/1:7,0:6:7.07:9,0,7	1/1:20,0:18:41.72:314,42,0	1/1:22,0:22:14.82:110,15,0	1/1:20,0:18:29.33:247,29,0	1/1:22,0:21:11.98:121,12,0	0/1:23,0:22:8.22:60,0,8	1/1:22,0:21:29.21:243,29,0	1/1:15,0:15:0.84:55,1,0	1/1:25,0:25:71.55:579,72,0	1/1:29,0:29:68.58:574,69,0	1/1:8,0:5:14.89:109,15,0
chr10	39260636	.	GAA	G	3714.34	PASS	AB=1.000;AC=42;AF=0.750;AN=56;BaseQRankSum=-3.297;DP=522;FS=12.091;HRun=3;HaplotypeScore=140.8572;InbreedingCoeff=0.5358;MQ=46.92;MQ0=18;MQRankSum=4.648;QD=8.93;ReadPosRankSum=4.055;VQSLOD=-0.5177;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:21:9.36:0,9,33	1/1:8,0:8:5.91:38,6,0	0/0:23,0:8:15:0,15,134	0/0:31,0:8:8.04:0,8,56	1/1:26,0:26:8.81:53,9,0	1/1:17,0:17:22.23:108,22,0	1/1:13,0:13:4.05:9,4,0	1/1:16,0:14:38.81:303,39,0	0/1:25,0:24:2.31:40,0,2	0/1:7,0:7:1.01:14,0,1	0/0:16,0:16:5.95:0,6,20	1/1:1,20:21:3:34,3,0	0/0:13,0:13:0.27:0,0,2	0/1:11,0:10:0.22:0,0,15	1/1:15,0:15:35.91:288,36,0	1/1:21,1:22:5.98:48,6,0	1/1:17,0:16:41.74:316,42,0	0/1:7,0:6:2.62:32,0,3	1/1:20,0:18:42.97:317,43,0	1/1:21,0:21:14.76:94,15,0	1/1:20,0:18:29.07:247,29,0	1/1:21,1:21:9.27:67,9,0	1/1:24,0:23:2.65:65,3,0	1/1:20,1:20:29.73:231,30,0	1/1:16,0:16:12.20:100,12,0	1/1:25,0:25:64.24:545,64,0	1/1:31,0:31:73.06:589,73,0	1/1:11,0:8:23.84:176,24,0
chr10	39260641	.	AG	A	54.48	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.871;DP=533;FS=8.601;HRun=1;HaplotypeScore=150.0511;InbreedingCoeff=0.5204;MQ=44.57;MQ0=24;MQRankSum=-5.338;QD=3.63;ReadPosRankSum=2.224;VQSLOD=-0.0528;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:22:2.51:0,3,54	0/0:8,0:8:4.26:0,4,41	0/0:20,0:6:12.04:0,12,150	0/0:32,0:7:11.74:0,12,106	0/0:25,0:25:8.22:0,8,110	1/1:1,8:9:24.24:117,24,0	1/1:3,3:6:13.17:51,13,0	0/0:21,0:18:52.30:0,52,584	0/0:26,0:25:4.97:0,5,20	0/0:9,0:9:13.01:0,13,79	0/0:15,0:15:1.82:0,2,13	0/0:20,0:20:5.75:0,6,60	0/0:16,0:16:6.18:0,6,89	0/0:13,0:12:6.44:0,6,69	0/0:15,0:15:24.84:0,25,324	0/0:23,0:23:1.59:0,2,9	0/0:20,0:19:51.15:0,51,635	0/0:9,0:8:9.64:0,10,99	0/0:20,0:18:51.01:0,51,553	0/0:22,0:22:8.78:0,9,145	0/0:21,0:19:33.02:0,33,418	0/0:25,0:23:9.87:0,10,117	0/0:27,0:25:13.23:0,13,148	0/0:21,0:20:18.38:0,18,292	0/0:15,0:15:17.72:0,18,196	0/0:28,0:28:80.10:0,80,938	0/0:31,0:31:54.84:0,55,757	0/0:13,0:9:21.07:0,21,280
chr10	39260643	.	AGAGAGAGAGAGAGAG	A	528.20	PASS	AB=0.923;AC=4;AF=0.071;AN=56;BaseQRankSum=4.722;DP=537;FS=28.333;HRun=0;HaplotypeScore=218.7934;InbreedingCoeff=0.0251;MQ=44.84;MQ0=25;MQRankSum=-4.827;QD=6.29;ReadPosRankSum=4.244;VQSLOD=1.2102;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:21:10.55:0,11,188	0/0:8,0:8:5.95:0,6,74	0/0:17,0:5:8.69:0,9,114	0/0:31,0:7:9:0,9,88	0/0:29,0:29:17.93:0,18,312	0/1:5,4:9:1.58:430,0,2	0/0:3,0:6:9.68:0,10,43	0/0:23,0:19:57.19:0,57,943	0/0:26,0:25:7.04:0,7,29	0/0:10,0:10:24.08:0,24,438	0/0:15,0:15:3.66:0,4,104	0/0:21,0:21:12.51:0,13,266	0/0:16,0:16:6.88:0,7,49	0/0:13,0:12:5.59:0,6,195	0/0:15,0:15:14.90:0,15,544	0/1:24,0:24:16.80:17,0,69	0/0:20,0:19:51.17:0,51,1087	0/0:9,0:8:14.41:0,14,349	0/0:19,0:18:51.09:0,51,780	0/1:22,0:22:19.81:20,0,217	0/0:20,0:18:29.79:0,30,560	0/0:25,0:23:6.95:0,7,166	0/0:27,0:25:17.65:0,18,261	0/0:23,0:22:24.42:0,24,681	0/0:15,0:15:17.93:0,18,527	0/0:28,0:28:39.43:0,39,1254	0/1:29,0:29:99:168,0,776	0/0:15,0:10:27.09:0,27,405
chr10	39260644	.	G	GGC	72.33	PASS	AB=0.952;AC=8;AF=0.143;AN=56;BaseQRankSum=5.214;DP=542;FS=5.487;HRun=0;HaplotypeScore=158.7323;InbreedingCoeff=0.0553;MQ=44.68;MQ0=25;MQRankSum=-3.569;QD=0.53;ReadPosRankSum=-0.023;VQSLOD=2.4659;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:19,1:19:31.81:32,0,36	0/0:8,0:8:5.99:0,6,55	0/0:17,0:5:9.03:0,9,138	0/0:29,0:6:8.84:0,9,91	0/1:29,1:30:17.10:17,0,158	0/0:9,0:9:15.19:0,15,69	1/1:6,0:6:7.96:75,8,0	0/0:26,0:22:56.67:0,57,724	0/0:26,0:25:9.02:0,9,94	0/0:10,0:10:20.63:0,21,155	0/0:14,1:15:5.95:0,6,43	0/0:20,0:20:12.03:0,12,148	0/0:18,0:18:6.91:0,7,100	0/1:13,0:12:1.47:1,0,73	0/0:14,0:14:32.78:0,33,433	0/0:25,0:25:9.90:0,10,93	0/0:21,0:20:51.17:0,51,720	0/0:9,0:8:12.21:0,12,172	0/0:19,0:18:48.60:0,49,628	0/0:23,0:23:15.85:0,16,168	0/0:20,0:18:30.10:0,30,451	0/1:23,2:23:20.23:20,0,118	0/1:23,1:25:22.32:22,0,101	0/0:23,0:22:23.21:0,23,335	0/1:14,1:15:34.18:34,0,149	0/0:28,0:28:84.06:0,84,1141	0/0:29,0:29:71.08:0,71,843	0/0:15,0:10:24.04:0,24,268
chr10	39260669	.	AGGGAGG	A	1296.57	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=4.188;DP=473;FS=15.592;HRun=0;HaplotypeScore=169.0791;InbreedingCoeff=0.0846;MQ=43.74;MQ0=28;MQRankSum=-8.602;QD=4.86;ReadPosRankSum=3.325;VQSLOD=1.2297;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:12,3:14:11.99:166,12,0	0/1:6,0:6:1.30:12,0,1	0/0:23,0:8:20.49:0,20,350	0/0:22,0:6:12.04:0,12,228	0/0:21,0:21:17.85:0,18,142	0/1:16,0:16:28.67:56,0,29	0/1:14,0:14:11.34:11,0,142	0/0:31,0:26:27.67:0,28,220	0/0:25,0:24:1.16:0,1,42	1/1:10,3:14:36.59:559,37,0	1/1:5,3:8:9.03:157,9,0	0/0:13,0:13:13.93:0,14,87	1/1:11,0:11:9.02:96,9,0	1/1:10,0:11:9.71:115,10,0	0/1:10,0:10:23.93:29,0,24	0/1:19,0:19:4.33:4,0,45	0/0:14,0:13:19.48:0,19,78	0/1:11,0:10:4.29:75,0,4	0/1:19,0:18:12.47:12,0,32	0/1:21,0:20:6.09:6,0,53	0/0:12,0:11:11.40:0,11,46	0/1:22,0:20:3.47:30,0,3	0/0:21,0:19:8.05:0,8,43	0/0:24,0:24:7.68:0,8,35	0/1:13,0:13:10.36:18,0,10	0/1:16,0:16:48.98:62,0,49	0/1:22,0:22:45.60:46,0,102	0/1:19,0:13:15.82:16,0,48
chr10	39260676	.	GAGGA	G	8136.81	PASS	AB=1.000;AC=46;AF=0.821;AN=56;BaseQRankSum=-0.215;DP=442;FS=0.751;HRun=0;HaplotypeScore=129.0443;InbreedingCoeff=0.4375;MQ=47.88;MQ0=22;MQRankSum=3.259;QD=21.47;ReadPosRankSum=2.590;VQSLOD=4.2285;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:11,0:10:2.97:3,0,23	1/1:6,0:6:18.03:226,18,0	0/0:26,0:11:31.29:0,31,463	0/0:27,0:10:9.63:0,10,251	1/1:20,0:20:38.80:487,39,0	1/1:20,0:20:32.68:392,33,0	0/1:14,0:14:22.07:143,0,22	1/1:9,16:20:51.04:639,51,0	1/1:26,0:25:30.01:599,30,0	1/1:17,0:17:14.52:180,15,0	1/1:6,0:6:3.24:25,3,0	1/1:13,0:13:26.96:366,27,0	0/1:7,0:7:3.76:19,0,4	1/1:10,0:10:8.98:73,9,0	1/1:10,1:11:33.03:410,33,0	1/1:17,0:17:39.03:543,39,0	1/1:13,0:13:36.03:486,36,0	0/1:9,0:8:2.41:51,0,2	1/1:3,14:16:39.09:536,39,0	1/1:14,0:13:29.98:374,30,0	1/1:14,0:14:30.05:394,30,0	1/1:14,1:14:24.06:331,24,0	1/1:4,15:18:2.20:46,2,0	1/1:4,20:24:5.94:69,6,0	0/0:10,0:10:0:0,0,0	1/1:11,2:13:35.74:426,36,0	1/1:18,4:22:62.96:875,63,0	1/1:15,0:12:33.03:443,33,0
chr10	39260683	.	GAAGGAAGA	G	2474.57	PASS	AB=0.895;AC=19;AF=0.339;AN=56;BaseQRankSum=6.449;DP=473;FS=0.517;HRun=0;HaplotypeScore=175.1383;InbreedingCoeff=0.8203;MQ=50.02;MQ0=20;MQRankSum=-9.925;QD=19.33;ReadPosRankSum=2.103;VQSLOD=3.1925;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,3:10:8.74:55,9,0	0/0:7,0:7:17.85:0,18,165	0/0:29,0:12:32.71:0,33,886	0/0:29,0:10:19.68:0,20,552	0/0:18,0:18:47.79:0,48,505	1/1:22,0:22:39.13:756,39,0	1/1:19,0:19:5.52:287,6,0	0/0:29,0:24:58:0,58,765	0/0:29,0:28:42.45:0,42,558	1/1:5,12:18:32.99:688,33,0	1/1:3,2:6:8.94:146,9,0	0/0:13,0:14:27.95:0,28,279	1/1:2,3:6:5.93:95,6,0	1/1:0,10:10:23.75:324,24,0	0/0:12,0:12:12.45:0,12,321	0/0:18,0:18:38.86:0,39,359	0/0:15,0:15:44.07:0,44,450	1/1:7,2:8:8.99:178,9,0	0/0:18,0:17:47.75:0,48,460	0/0:17,0:16:38.59:0,39,428	0/0:18,0:18:54.04:0,54,664	0/0:13,0:13:12.10:0,12,336	0/0:17,0:17:11.82:0,12,85	0/0:22,0:22:6:0,6,72	1/1:1,10:11:14.72:92,15,0	0/1:15,2:17:53.75:54,0,382	0/0:25,0:25:19.65:0,20,612	0/0:15,0:12:17.60:0,18,183
chr10	39260687	.	GAAGA	G	4385.69	PASS	AB=1.000;AC=35;AF=0.625;AN=56;BaseQRankSum=6.745;DP=494;FS=0.947;HRun=0;HaplotypeScore=142.1065;InbreedingCoeff=-0.2821;MQ=50.84;MQ0=20;MQRankSum=-3.208;QD=10.11;ReadPosRankSum=9.706;VQSLOD=3.1790;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:13,0:13:14.42:56,0,14	1/1:7,0:7:15.62:88,16,0	0/0:30,0:13:36.06:0,36,725	0/0:30,0:11:14.05:0,14,405	0/1:18,0:18:68.15:148,0,68	1/1:5,17:22:43.85:676,44,0	1/1:4,15:19:27.74:317,28,0	0/1:32,0:27:99:163,0,217	0/1:30,0:29:76:188,0,76	0/1:17,0:17:19.99:331,0,20	0/1:8,0:8:15.92:119,0,16	1/1:14,0:14:19.99:146,20,0	0/1:9,0:9:25.43:94,0,25	1/1:10,0:10:23.75:205,24,0	0/1:12,0:12:5.02:121,0,5	1/1:19,0:19:3.72:188,4,0	1/1:15,0:15:7.54:174,8,0	0/1:11,0:10:12.61:111,0,13	0/1:19,0:18:84.56:176,0,85	0/1:18,0:17:64.47:109,0,64	0/1:19,0:19:88.83:89,0,144	0/1:13,0:13:73.18:104,0,73	0/1:18,0:18:5.23:5,0,65	0/1:22,0:22:17.69:18,0,18	1/1:11,0:11:14.51:91,15,0	0/1:16,0:16:54.65:169,0,55	0/1:28,0:28:77.08:302,0,77	1/1:14,0:11:27.64:198,28,0
chr10	39261013	.	C	CTCCTGAGGCT	2157.36	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-2.132;DP=646;FS=2.016;HRun=0;HaplotypeScore=188.3071;InbreedingCoeff=0.9984;MQ=88.95;MQ0=0;MQRankSum=-6.786;QD=50.17;ReadPosRankSum=-0.851;VQSLOD=3.4124;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:90.28:0,90,2600	0/0:14,0:14:39.13:0,39,1145	0/0:27,0:27:48.12:0,48,1168	0/0:25,0:25:48.16:0,48,1331	0/0:20,0:20:42.14:0,42,1223	1/1:7,7:16:24.08:988,24,0	1/1:21,4:27:30.10:1290,30,0	0/0:31,0:31:51.17:0,51,1478	0/0:30,0:30:75.24:0,75,2234	0/0:23,0:23:54.19:0,54,1588	0/0:16,0:16:39.13:0,39,1151	0/0:23,0:23:69.24:0,69,2113	0/0:23,0:23:60.21:0,60,1731	0/0:23,0:23:54.19:0,54,1634	0/0:33,0:33:72.23:0,72,2034	0/0:23,0:23:63.22:0,63,1846	0/0:17,0:17:42.13:0,42,1209	0/0:15,0:15:36.10:0,36,948	0/0:21,0:21:39.05:0,39,883	0/0:18,0:18:54.18:0,54,1554	0/0:34,0:34:84.25:0,84,2425	0/0:22,0:22:57.15:0,57,1480	0/0:17,0:17:42.10:0,42,1167	0/0:22,0:21:63.22:0,63,1903	0/0:16,0:16:45.15:0,45,1368	0/0:30,0:30:72.25:0,72,2027	0/0:28,0:28:75.26:0,75,2113	0/0:19,0:19:36.12:0,36,1093
chr10	39261379	.	A	AT	2842.13	PASS	AB=0.699;AC=38;AF=0.679;AN=56;BaseQRankSum=-4.725;DP=488;FS=0.522;HRun=15;HaplotypeScore=77.0300;InbreedingCoeff=0.1974;MQ=79.94;MQ0=6;MQRankSum=-1.379;QD=6.42;ReadPosRankSum=-2.855;VQSLOD=2.0173;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:17:17.04:87,17,0	0/1:5,8:13:29.98:102,0,30	0/1:43,1:20:8.16:8,0,78	0/1:43,0:20:7.09:7,0,26	0/1:10,12:24:7.37:195,0,7	0/0:3,0:12:18.09:0,18,52	0/0:4,0:14:20.34:0,20,59	1/1:9,14:24:18.27:265,18,0	0/1:3,4:7:24.49:80,0,24	1/1:21,0:21:26.60:129,27,0	1/1:13,0:14:6.62:31,7,0	0/1:7,11:18:0.02:108,0,0	0/0:7,0:7:15.57:0,16,92	0/0:12,0:12:25.30:0,25,147	1/1:3,7:10:8.98:73,9,0	1/1:5,7:14:5.53:126,6,0	1/1:6,12:17:11.95:204,12,0	1/1:13,0:13:20.15:110,20,0	1/1:12,5:19:5.69:130,6,0	1/1:8,14:23:2.51:308,3,0	1/1:4,9:15:13.59:154,14,0	0/1:6,7:13:12.93:86,0,13	0/1:11,2:17:35.32:48,0,35	0/1:3,10:13:0.93:86,0,1	1/1:9,0:9:8.62:46,9,0	1/1:4,13:19:16.90:254,17,0	1/1:5,16:21:29.96:251,30,0	0/1:2,9:11:12.04:127,0,12
chr10	39262526	.	GA	G	5061.44	PASS	AB=0.942;AC=19;AF=0.339;AN=56;BaseQRankSum=13.665;DP=687;FS=3.187;HRun=9;HaplotypeScore=78.7870;InbreedingCoeff=0.9170;MQ=77.23;MQ0=4;MQRankSum=-1.441;QD=19.10;ReadPosRankSum=2.375;VQSLOD=5.4441;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,29:32:78.04:713,78,0	0/0:4,0:4:12.04:0,12,139	0/1:45,3:32:15.55:16,0,483	0/0:31,0:19:20.37:0,20,207	0/0:34,0:34:99:0,99,1127	1/1:2,26:27:75.03:683,75,0	1/1:1,19:20:48.02:438,48,0	0/0:33,0:33:84.21:0,84,926	0/0:16,0:16:47.88:0,48,530	1/1:2,24:26:71.97:642,72,0	1/1:2,29:31:83.32:732,83,0	0/0:26,0:26:69.18:0,69,777	1/1:1,16:17:48.02:439,48,0	1/1:3,16:19:45.02:411,45,0	0/0:22,0:22:63.19:0,63,727	0/0:21,0:21:60.18:0,60,695	0/0:40,0:40:99:0,117,1300	1/1:2,19:21:48.02:439,48,0	0/0:12,0:13:35.96:0,36,383	0/0:36,0:36:96.28:0,96,1109	0/0:19,0:19:45.08:0,45,488	0/0:18,0:18:48.13:0,48,546	0/0:22,0:22:57.16:0,57,651	0/0:20,0:20:54.08:0,54,580	1/1:1,21:22:60.03:549,60,0	0/0:28,1:29:50.72:0,51,803	0/0:28,0:28:74.97:0,75,807	0/0:9,0:9:27.08:0,27,312
chr10	39262743	.	GA	G	1797.81	PASS	AB=0.923;AC=17;AF=0.315;AN=54;BaseQRankSum=4.210;DP=541;FS=1.516;HRun=10;HaplotypeScore=107.6317;InbreedingCoeff=0.8171;MQ=52.41;MQ0=14;MQRankSum=-7.732;QD=10.27;ReadPosRankSum=2.997;VQSLOD=2.8882;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:18,13:29:7.85:278,8,0	0/0:9,0:9:15.03:0,15,157	./.	0/0:19,0:9:4.07:0,4,12	0/0:17,0:17:36.10:0,36,398	1/1:4,16:19:50.77:428,51,0	1/1:13,15:27:47.79:397,48,0	0/0:26,1:30:30.47:0,30,460	0/0:25,0:25:31.11:0,31,502	1/1:5,7:12:12.31:194,12,0	1/1:8,11:17:19.55:198,20,0	0/1:22,2:23:2.34:2,0,186	1/1:6,4:10:7.39:99,7,0	1/1:4,6:10:17.96:153,18,0	0/0:17,0:18:26.86:0,27,259	0/0:21,1:22:15.97:0,16,362	0/0:33,0:33:47.01:0,47,603	1/1:12,8:20:13.25:239,13,0	0/0:28,0:25:47.54:0,48,443	0/0:20,0:20:31.27:0,31,314	0/0:6,0:6:6:0,6,58	0/0:14,1:15:4.03:0,4,264	0/0:24,0:23:39.10:0,39,424	0/0:23,0:24:41.92:0,42,427	0/0:11,0:11:18.03:0,18,192	0/0:25,0:24:60.11:0,60,637	0/0:15,0:15:33.02:0,33,336	0/0:3,0:3:4.25:0,4,32
chr10	39262759	.	G	GA	4665.52	PASS	AB=0.702;AC=48;AF=0.857;AN=56;BaseQRankSum=-1.592;DP=565;FS=5.795;HRun=13;HaplotypeScore=90.6193;InbreedingCoeff=0.1043;MQ=53.37;MQ0=9;MQRankSum=-1.823;QD=8.51;ReadPosRankSum=1.434;VQSLOD=4.1827;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:33:24.81:172,25,0	1/1:0,5:6:11.85:98,12,0	0/0:17,0:6:10.85:0,11,60	0/1:16,0:6:23.79:47,0,24	1/1:5,17:22:17.21:289,17,0	1/1:19,0:19:35.06:165,35,0	1/1:24,0:23:30.34:138,30,0	1/1:11,22:33:23.73:320,24,0	0/1:9,14:23:14.10:168,0,14	1/1:8,0:17:15.70:84,16,0	1/1:25,0:25:19.23:111,19,0	1/1:6,11:17:9.73:72,10,0	0/1:7,0:17:1.13:3,0,1	1/1:13,0:14:4.79:28,5,0	1/1:5,15:21:32.60:271,33,0	1/1:5,12:18:9.29:216,9,0	0/1:9,17:30:28.88:283,0,29	1/1:18,0:21:19.68:116,20,0	1/1:9,16:24:46.43:389,46,0	1/1:8,7:16:1.94:125,2,0	1/1:2,2:3:3:28,3,0	0/1:8,3:11:5.57:95,0,6	1/1:9,16:25:21.41:328,21,0	1/1:8,16:24:6.51:181,7,0	1/1:6,2:17:24.47:146,24,0	0/1:12,23:36:31.76:377,0,32	1/1:4,14:18:33.03:302,33,0	1/1:3,2:5:12.48:112,12,0
chr10	39262761	.	A	AAAG	1917.89	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=3.297;DP=579;FS=17.085;HRun=0;HaplotypeScore=118.0357;InbreedingCoeff=0.1791;MQ=56.09;MQ0=9;MQRankSum=-9.057;QD=9.89;ReadPosRankSum=4.911;VQSLOD=2.1352;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:35,0:33:99:180,0,124	0/0:6,0:6:12.26:0,12,74	0/0:19,0:8:16.40:0,16,124	0/0:19,0:8:14.10:0,14,119	0/0:23,0:23:59.20:0,59,417	1/1:4,15:19:51.05:845,51,0	1/1:6,19:24:41.97:720,42,0	0/0:35,0:35:56.73:0,57,407	0/0:23,0:23:35.56:0,36,297	0/1:17,0:17:99:114,0,110	0/1:27,0:25:29.22:29,0,138	0/1:19,0:18:9.96:10,0,122	0/1:17,0:16:13.10:13,0,60	0/1:14,0:14:34.66:35,0,117	0/0:22,0:22:43:0,43,291	0/0:18,0:18:35.96:0,36,268	0/0:31,0:31:55.22:0,55,465	0/1:21,0:20:86.95:130,0,87	0/0:27,0:25:39.74:0,40,353	0/0:16,0:16:39.48:0,39,292	0/0:5,0:4:5.94:0,6,45	0/0:12,0:13:29.27:0,29,235	0/0:26,0:25:56.56:0,57,395	0/0:22,0:22:27.13:0,27,203	0/0:18,0:18:3.63:0,4,94	0/0:39,0:38:66.67:0,67,751	0/0:17,0:17:28.93:0,29,177	0/0:6,0:6:17.65:0,18,112
chr10	39263239	.	TA	T	2505.27	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=6.123;DP=750;FS=4.214;HRun=2;HaplotypeScore=98.2641;InbreedingCoeff=0.9994;MQ=84.24;MQ0=0;MQRankSum=-0.781;QD=32.54;ReadPosRankSum=0.099;VQSLOD=3.2726;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:56:99:0,169,2495	0/0:10,0:10:27.08:0,27,387	0/0:23,0:23:35.81:0,36,805	0/0:21,0:21:56.38:0,56,868	0/0:22,0:22:63.21:0,63,942	1/1:0,24:24:69.22:896,69,0	1/1:0,34:34:90.29:1168,90,0	0/0:25,0:25:72.21:0,72,1026	0/0:22,0:22:66.22:0,66,989	0/0:27,0:27:81.25:0,81,1191	0/0:14,0:14:39.09:0,39,510	0/0:28,0:28:81.27:0,81,1194	0/0:26,0:26:75.25:0,75,1122	0/0:28,0:28:84.27:0,84,1237	0/0:22,0:22:66.22:0,66,989	0/0:26,0:26:78.26:0,78,1168	0/0:34,0:34:99:0,102,1525	0/0:26,0:26:78.24:0,78,1145	0/0:34,0:34:99:0,99,1442	0/0:29,0:29:84.28:0,84,1258	0/0:54,0:54:99:0,157,2315	0/0:24,0:24:69.23:0,69,1034	0/0:11,0:11:30.10:0,30,448	0/0:42,0:42:99:0,123,1802	1/1:2,17:19:45.15:584,45,0	0/0:26,0:26:78.24:0,78,1131	0/0:24,0:24:72.23:0,72,1059	0/0:19,0:19:54.18:0,54,809
chr10	39264194	.	C	CAGAAT	1715.41	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.688;DP=683;FS=4.173;HRun=0;HaplotypeScore=138.0555;InbreedingCoeff=0.9925;MQ=86.53;MQ0=0;MQRankSum=-7.053;QD=57.18;ReadPosRankSum=1.029;VQSLOD=4.3329;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,108,2468	0/0:6,0:6:18.06:0,18,414	0/0:25,0:24:65.69:0,66,1126	0/0:25,0:25:55.29:0,55,1204	0/0:17,0:17:51.12:0,51,1085	1/1:4,10:14:27.04:832,27,0	1/1:0,11:16:33.10:1005,33,0	0/0:23,0:23:54.19:0,54,1195	0/0:24,0:24:66.23:0,66,1504	0/0:17,0:17:48.15:0,48,1062	0/0:14,0:14:41.89:0,42,782	0/0:39,0:39:99:0,117,2516	0/0:26,0:26:72.25:0,72,1640	0/0:28,0:28:81.26:0,81,1792	0/0:25,0:25:75.16:0,75,1571	0/0:27,0:27:81.22:0,81,1743	0/0:43,0:43:99:0,123,2748	0/0:36,0:36:99:0,105,2285	0/0:20,0:20:54.13:0,54,1117	0/0:12,0:12:36.12:0,36,832	0/0:61,0:61:99:0,183,3942	0/0:18,0:18:54.16:0,54,1167	0/0:7,0:7:21.07:0,21,488	0/0:35,0:35:99:0,103,2244	0/0:19,0:19:57.16:0,57,1220	0/0:26,0:26:75.26:0,75,1720	0/0:32,0:32:96.28:0,96,2139	0/0:9,0:9:27.09:0,27,604
chr10	39264764	.	GAGA	G	2089.37	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.984;DP=734;FS=1.928;HRun=0;HaplotypeScore=103.0582;InbreedingCoeff=0.9985;MQ=74.17;MQ0=0;MQRankSum=-2.749;QD=40.18;ReadPosRankSum=-0.928;VQSLOD=4.6580;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:56:99:0,166,3825	0/0:8,0:8:24.08:0,24,566	0/0:15,0:14:40.48:0,40,770	0/0:16,0:15:28.98:0,29,581	0/0:30,0:30:90.31:0,90,2123	1/1:0,19:19:45.15:777,45,0	1/1:1,32:33:87.13:1434,87,0	0/0:25,0:26:60.21:0,60,1403	0/0:25,0:25:72.25:0,72,1702	0/0:26,0:26:78.27:0,78,1846	0/0:18,0:18:48.64:0,49,1135	0/0:39,0:39:99:0,117,2672	0/0:23,0:23:69.24:0,69,1604	0/0:29,0:29:84.27:0,84,1913	0/0:28,0:28:84.27:0,84,1878	0/0:28,0:28:84.28:0,84,1920	0/0:37,0:37:99:0,108,2553	0/0:30,0:30:87.30:0,87,2052	0/0:21,0:21:63.20:0,63,1431	0/0:18,0:18:51.18:0,51,1205	0/0:57,0:57:99:0,163,3809	0/0:21,0:21:63.22:0,63,1460	0/0:19,0:19:57.20:0,57,1298	0/0:33,0:33:99:0,99,2244	0/0:15,0:15:45.15:0,45,1063	0/0:30,0:30:87.29:0,87,1973	0/0:21,0:21:60.21:0,60,1417	0/0:13,0:13:39.13:0,39,921
chr10	39265100	.	A	ATT	1416.94	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=7.155;DP=613;FS=1.133;HRun=8;HaplotypeScore=90.7394;InbreedingCoeff=0.9956;MQ=79.23;MQ0=0;MQRankSum=-1.633;QD=22.85;ReadPosRankSum=-0.807;VQSLOD=2.7180;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:71.50:0,72,676	0/0:10,0:10:27.06:0,27,301	0/0:19,0:19:42.06:0,42,448	0/0:11,0:11:21:0,21,220	0/0:26,0:26:69.17:0,69,768	1/1:2,24:26:66.14:991,66,0	1/1:6,13:20:30.06:448,30,0	0/0:36,0:36:87.15:0,87,940	0/0:23,0:24:68.92:0,69,748	0/0:29,0:29:42.61:0,43,427	0/0:25,0:25:40.06:0,40,436	0/0:16,0:16:45.11:0,45,493	0/0:13,0:13:29.84:0,30,223	0/0:14,0:14:20.45:0,20,160	0/0:30,0:30:69.17:0,69,768	0/0:25,0:25:72.13:0,72,766	0/0:29,0:29:75.17:0,75,826	0/0:24,0:24:46.90:0,47,468	0/0:14,0:14:30.05:0,30,328	0/0:27,0:27:81.22:0,81,903	0/0:20,0:20:45.09:0,45,491	0/0:18,0:18:48.03:0,48,509	0/0:25,0:25:72.15:0,72,784	0/0:12,0:12:33.08:0,33,368	1/1:1,0:16:34.93:120,35,0	0/0:25,0:25:66.14:0,66,727	0/0:33,0:33:93.25:0,93,1037	0/0:11,0:11:33.09:0,33,368
chr10	39266161	.	C	CT	1279.35	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.616;DP=635;FS=0.000;HRun=0;HaplotypeScore=63.9779;InbreedingCoeff=0.9873;MQ=74.45;MQ0=0;MQRankSum=-1.756;QD=24.60;ReadPosRankSum=1.062;VQSLOD=4.6271;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,123,1663	0/0:6,0:6:18.06:0,18,248	0/0:17,0:16:32.37:0,32,426	0/0:15,0:15:36.24:0,36,506	0/0:10,0:10:30.10:0,30,407	1/1:1,20:21:57.65:695,58,0	1/1:4,27:31:58.23:706,58,0	0/0:27,0:27:81.25:0,81,1097	0/0:19,0:19:54.15:0,54,709	0/0:22,0:22:60.20:0,60,838	0/0:14,0:14:42.14:0,42,583	0/0:25,0:25:75.25:0,75,1041	0/0:26,0:26:78.22:0,78,1064	0/0:26,0:26:78.23:0,78,1043	0/0:28,0:28:84.28:0,84,1171	0/0:16,0:16:48.16:0,48,670	0/0:33,0:33:93.28:0,93,1275	0/0:33,0:33:99:0,99,1358	0/0:23,0:23:66.21:0,66,907	0/0:13,0:13:39.10:0,39,524	0/0:58,0:56:99:0,171,2305	0/0:16,0:16:48.16:0,48,666	0/0:17,0:17:45.15:0,45,629	0/0:34,0:34:99:0,102,1365	0/0:22,0:22:66.01:0,66,888	0/0:20,0:20:60.18:0,60,820	0/0:17,0:17:51.16:0,51,695	0/0:5,0:5:15.05:0,15,209
chr10	39266304	.	A	ACACC	1142.80	PASS	AB=0.833;AC=3;AF=0.054;AN=56;BaseQRankSum=6.437;DP=712;FS=3.212;HRun=0;HaplotypeScore=128.8894;InbreedingCoeff=0.7079;MQ=86.98;MQ0=0;MQRankSum=-6.414;QD=47.62;ReadPosRankSum=-0.314;VQSLOD=4.3848;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:93.32:0,93,1842	0/0:8,0:8:24.08:0,24,477	0/0:29,0:29:81.27:0,81,1567	0/0:23,0:23:57.34:0,57,1133	0/0:13,0:13:39.11:0,39,709	0/1:8,2:10:5.92:311,0,6	1/1:6,8:14:34.02:938,34,0	0/0:35,0:35:99:0,102,1966	0/0:44,0:44:99:0,126,2456	0/0:35,0:35:99:0,105,2004	0/0:16,0:16:48.16:0,48,948	0/0:29,0:29:84.29:0,84,1677	0/0:25,0:25:75.26:0,75,1476	0/0:32,0:32:93.32:0,93,1836	0/0:29,0:29:87.30:0,87,1738	0/0:19,0:19:54.18:0,54,1035	0/0:31,0:31:93.32:0,93,1816	0/0:21,0:21:60.21:0,60,1198	0/0:32,0:32:96.33:0,96,1915	0/0:21,0:21:63.20:0,63,1212	0/0:63,0:63:99:0,187,3667	0/0:28,0:28:84.29:0,84,1666	0/0:17,0:17:51.18:0,51,1019	0/0:21,0:21:60.21:0,60,1198	0/0:16,0:16:42.14:0,42,839	0/0:38,0:38:99:0,114,2257	0/0:28,0:26:81.28:0,81,1595	0/0:3,0:3:9.03:0,9,179
chr10	39266305	.	CCTG	C	169.24	PASS	AB=0.671;AC=2;AF=0.036;AN=56;BaseQRankSum=5.412;DP=715;FS=4.516;HRun=0;HaplotypeScore=114.4622;InbreedingCoeff=-0.0031;MQ=86.18;MQ0=0;MQRankSum=-4.330;QD=8.06;ReadPosRankSum=2.305;VQSLOD=2.8107;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:93.32:0,93,2292	0/0:8,0:8:24.08:0,24,591	0/0:28,0:28:84.29:0,84,1965	0/0:23,0:23:59.29:0,59,1420	0/0:14,0:14:42.14:0,42,1007	0/1:2,8:10:14.02:217,0,14	0/1:8,3:11:41.26:41,0,117	0/0:36,0:36:99:0,108,2583	0/0:46,0:46:99:0,138,3331	0/0:35,0:35:99:0,105,2503	0/0:16,0:16:48.16:0,48,1182	0/0:30,0:30:90.31:0,90,2174	0/0:26,0:26:78.27:0,78,1848	0/0:32,0:32:96.33:0,96,2339	0/0:29,0:29:87.30:0,87,2122	0/0:19,0:19:57.19:0,57,1353	0/0:32,0:32:96.33:0,96,2318	0/0:21,0:21:63.22:0,63,1543	0/0:32,0:32:96.33:0,96,2300	0/0:21,0:21:63.22:0,63,1549	0/0:64,0:64:99:0,193,4710	0/0:29,0:29:87.30:0,87,2128	0/0:18,0:18:54.19:0,54,1300	0/0:21,0:21:63.22:0,63,1548	0/0:15,0:15:45.15:0,45,1105	0/0:38,0:38:99:0,114,2792	0/0:27,0:25:81.28:0,81,1963	0/0:3,0:3:9.03:0,9,222
chr10	39266309	.	AAGGCCACCTGGAAATGCATCCAGAAT	A	2527.58	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.662;DP=715;FS=2.923;HRun=0;HaplotypeScore=458.3186;InbreedingCoeff=0.9694;MQ=83.46;MQ0=0;MQRankSum=-7.756;QD=120.36;ReadPosRankSum=0.722;VQSLOD=2.5798;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:93.32:0,93,9546	0/0:8,0:8:24.08:0,24,2669	0/0:26,0:26:78.27:0,78,5003	0/0:22,0:22:63.22:0,63,4595	0/0:17,0:17:51.18:0,51,5365	1/1:2,8:10:30.10:1640,30,0	1/1:8,3:11:33.11:1009,33,0	0/0:35,0:35:99:0,105,9074	0/0:46,0:46:99:0,138,13997	0/0:34,0:34:99:0,102,11113	0/0:17,0:17:51.18:0,51,5488	0/0:30,0:30:87.30:0,87,9470	0/0:25,0:25:75.26:0,75,7692	0/0:32,0:32:96.32:0,96,9975	0/0:28,0:28:84.29:0,84,9313	0/0:18,0:18:54.19:0,54,5713	0/0:32,0:32:96.33:0,96,9777	0/0:23,0:23:69.24:0,69,7834	0/0:30,0:30:90.31:0,90,8483	0/0:21,0:21:63.20:0,63,5113	0/0:67,0:67:99:0,202,20374	0/0:29,0:29:84.27:0,84,8971	0/0:19,0:19:57.20:0,57,5538	0/0:23,0:23:69.24:0,69,6953	0/0:15,0:15:45.15:0,45,5421	0/0:38,0:38:99:0,114,12004	0/0:25,0:23:72.21:0,72,6299	0/0:3,0:3:9.03:0,9,1118
chr10	39266837	.	G	GT	759.43	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-5.522;DP=710;FS=3.133;HRun=1;HaplotypeScore=70.1360;InbreedingCoeff=0.9972;MQ=87.15;MQ0=0;MQRankSum=-2.796;QD=37.97;ReadPosRankSum=1.359;VQSLOD=4.3233;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,117,1517	0/0:9,0:9:24.08:0,24,310	0/0:28,0:28:79.70:0,80,923	0/0:28,0:28:72.21:0,72,926	0/0:27,0:27:78.25:0,78,1011	0/0:13,0:13:33.09:0,33,412	0/0:31,0:31:75.23:0,75,959	0/0:33,0:33:99:0,99,1283	0/0:31,0:31:87.27:0,87,1115	0/0:22,0:22:60.19:0,60,779	0/0:15,0:15:42.14:0,42,545	0/0:31,0:31:93.30:0,93,1206	0/0:11,0:11:33.11:0,33,428	0/0:19,0:19:48.16:0,48,623	0/0:23,0:23:66.21:0,66,857	0/0:31,0:31:84.27:0,84,1091	0/0:32,0:32:96.31:0,96,1245	0/0:36,0:36:99:0,105,1362	0/0:19,0:19:57.16:0,57,713	0/0:21,0:21:54.18:0,54,701	0/0:33,0:33:96.31:0,96,1247	0/0:22,0:22:60.18:0,60,766	0/0:25,0:25:72.23:0,72,935	0/0:35,0:35:99:0,105,1363	1/1:0,20:20:57.19:854,57,0	0/0:34,0:34:99:0,99,1283	0/0:28,0:28:84.27:0,84,1089	0/0:11,0:11:33.11:0,33,428
chr10	39266855	.	AG	A	1216.80	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.438;DP=724;FS=1.366;HRun=3;HaplotypeScore=70.3109;InbreedingCoeff=0.9915;MQ=82.07;MQ0=0;MQRankSum=-1.196;QD=26.45;ReadPosRankSum=-0.019;VQSLOD=2.8704;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,138,1964	0/0:7,0:7:18.06:0,18,255	0/0:22,0:22:54.15:0,54,716	0/0:28,0:28:75.19:0,75,996	0/0:28,0:28:84.28:0,84,1207	1/1:0,13:13:33.10:409,33,0	1/1:1,32:33:75.24:929,75,0	0/0:33,0:33:90.29:0,90,1263	0/0:32,0:32:90.30:0,90,1285	0/0:25,0:25:72.24:0,72,1019	0/0:13,0:13:39.13:0,39,550	0/0:30,0:30:87.28:0,87,1230	0/0:12,0:12:36.12:0,36,518	0/0:19,0:19:57.19:0,57,812	0/0:24,0:24:69.23:0,69,987	0/0:25,0:25:75.25:0,75,1079	0/0:39,0:39:99:0,114,1606	0/0:39,0:39:99:0,114,1608	0/0:25,0:25:72.24:0,72,1020	0/0:21,0:21:54.16:0,54,757	0/0:35,0:35:99:0,105,1460	0/0:27,0:27:78.25:0,78,1092	0/0:19,0:19:57.17:0,57,797	0/0:35,0:35:99:0,105,1500	0/0:22,0:22:60.20:0,60,863	0/0:36,0:36:99:0,108,1546	0/0:30,0:30:87.24:0,87,1174	0/0:6,0:6:18.06:0,18,259
chr10	39267635	.	A	AATTAC	2991.42	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-6.965;DP=810;FS=4.051;HRun=0;HaplotypeScore=144.7811;InbreedingCoeff=0.9938;MQ=86.58;MQ0=1;MQRankSum=-6.303;QD=61.05;ReadPosRankSum=1.912;VQSLOD=4.5361;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,150,3215	0/0:8,0:8:24.08:0,24,521	0/0:26,0:27:66.09:0,66,1346	0/0:28,0:28:79.76:0,80,1510	0/0:21,0:21:60.21:0,60,1303	1/1:4,16:21:45.15:1368,45,0	1/1:5,20:27:60.16:1745,60,0	0/0:41,0:41:99:0,115,2392	0/0:24,0:24:69.22:0,69,1442	0/0:32,0:32:90.29:0,90,1835	0/0:21,0:21:60.18:0,60,1224	0/0:42,0:42:99:0,123,2555	0/0:31,0:31:84.29:0,84,1824	0/0:44,0:44:99:0,129,2724	0/0:45,0:45:99:0,129,2757	0/0:29,0:29:87.28:0,87,1818	0/0:33,0:33:93.24:0,93,1815	0/0:25,0:25:69.20:0,69,1380	0/0:21,0:21:63.21:0,63,1302	0/0:25,0:25:72.24:0,72,1526	0/0:44,0:44:99:0,126,2673	0/0:18,0:18:45.15:0,45,969	0/0:19,0:19:51.17:0,51,1107	0/0:45,0:45:99:0,132,2860	0/0:9,0:9:24.06:0,24,479	0/0:38,0:38:99:0,105,2241	0/0:31,0:31:90.30:0,90,1916	0/0:7,0:7:18.05:0,18,352
chr10	39268219	.	T	TGG	2178.64	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-1.672;DP=619;FS=5.975;HRun=4;HaplotypeScore=73.5741;InbreedingCoeff=0.9552;MQ=80.62;MQ0=0;MQRankSum=-2.027;QD=41.11;ReadPosRankSum=0.034;VQSLOD=2.8016;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,132,1724	0/0:5,0:5:15.05:0,15,200	0/0:16,1:17:7.42:0,7,453	0/0:20,0:20:47.85:0,48,551	0/0:21,0:21:60.20:0,60,799	1/1:0,11:11:30.10:540,30,0	1/1:1,20:22:54.19:970,54,0	0/0:23,0:23:48.15:0,48,623	0/0:26,0:26:75.25:0,75,999	0/0:20,0:20:60.19:0,60,788	0/0:9,0:9:24.07:0,24,306	0/0:33,0:33:99:0,99,1320	0/0:17,0:17:51.17:0,51,679	0/0:17,0:17:48.14:0,48,624	0/0:25,0:25:69.14:0,69,854	0/0:22,0:22:63.20:0,63,841	0/0:27,0:27:66.19:0,66,862	0/0:22,0:22:66.20:0,66,861	0/0:21,0:21:45.14:0,45,600	0/0:16,0:16:36.12:0,36,480	0/0:62,0:62:99:0,157,2078	0/0:21,0:21:63.21:0,63,840	0/0:18,0:18:51.16:0,51,673	0/0:40,0:40:99:0,114,1486	1/1:1,18:20:45.15:811,45,0	0/0:22,0:22:63.19:0,63,825	0/0:12,0:12:30.08:0,30,384	0/0:4,0:4:12.04:0,12,160
chr10	39268486	.	C	CAACA	1453.38	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-4.992;DP=380;FS=4.264;HRun=0;HaplotypeScore=63.0352;InbreedingCoeff=0.7764;MQ=89.70;MQ0=0;MQRankSum=-4.503;QD=51.91;ReadPosRankSum=-0.401;VQSLOD=4.1019;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:63.20:0,63,1117	0/0:4,0:4:12.04:0,12,220	0/0:14,0:14:36.09:0,36,597	0/0:17,0:17:33.11:0,33,574	0/0:8,0:8:24.08:0,24,442	1/1:0,6:6:9.03:237,9,0	1/1:3,18:22:54.12:1330,54,0	0/0:13,0:13:33.11:0,33,589	0/0:20,0:20:51.17:0,51,937	0/0:7,0:7:12.04:0,12,217	0/0:1,0:1:3.01:0,3,55	0/0:13,0:13:36.08:0,36,591	0/0:6,0:6:18.06:0,18,331	0/0:12,0:12:33.10:0,33,577	0/0:17,0:17:48.16:0,48,876	0/0:10,0:10:27.08:0,27,465	0/0:23,0:23:69.21:0,69,1236	0/0:28,0:28:78.22:0,78,1394	0/0:8,0:8:18.05:0,18,275	0/0:1,0:1:3.01:0,3,55	0/0:42,0:42:99:0,118,2109	0/0:6,0:6:18.03:0,18,254	0/0:9,0:9:24.08:0,24,434	0/0:34,0:34:87.23:0,87,1532	0/0:13,0:13:39.12:0,39,687	0/0:10,0:10:30.09:0,30,521	0/0:9,0:8:27.09:0,27,488	0/0:6,0:6:18.06:0,18,331
chr10	39269778	.	TGGTGACCCTGTGA	T	3395.87	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.393;DP=716;FS=2.276;HRun=0;HaplotypeScore=262.0982;InbreedingCoeff=0.9986;MQ=78.14;MQ0=0;MQRankSum=-9.576;QD=97.02;ReadPosRankSum=-0.464;VQSLOD=3.4483;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,138,8127	0/0:11,0:11:33.11:0,33,1743	0/0:22,0:22:66.23:0,66,2952	0/0:12,0:12:35.48:0,35,1167	0/0:9,0:9:24.08:0,24,1585	1/1:3,12:15:40.28:1379,40,0	1/1:3,17:20:55.99:2017,56,0	0/0:36,0:36:99:0,102,5853	0/0:24,0:24:66.23:0,66,4124	0/0:31,0:31:87.30:0,87,5511	0/0:19,0:19:54.19:0,54,3107	0/0:20,0:20:60.21:0,60,3987	0/0:32,0:32:96.33:0,96,5808	0/0:26,0:26:78.27:0,78,5073	0/0:32,0:32:90.31:0,90,5855	0/0:18,0:18:54.19:0,54,3549	0/0:39,0:39:99:0,114,6931	0/0:32,0:32:93.32:0,93,6150	0/0:20,0:20:57.20:0,57,3415	0/0:25,0:25:72.25:0,72,4497	0/0:65,0:65:99:0,196,11855	0/0:19,0:19:57.20:0,57,3640	0/0:16,0:16:48.14:0,48,2686	0/0:37,0:37:99:0,105,6425	0/0:32,0:32:90.31:0,90,5563	0/0:17,0:17:51.18:0,51,3358	0/0:29,0:29:87.30:0,87,5174	0/0:11,0:11:33.11:0,33,2198
chr10	39269835	.	CTCTT	C	1600.61	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.367;DP=736;FS=5.515;HRun=0;HaplotypeScore=124.8082;InbreedingCoeff=0.9976;MQ=72.95;MQ0=0;MQRankSum=-4.452;QD=36.38;ReadPosRankSum=0.157;VQSLOD=3.7780;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,138,3712	0/0:10,0:10:30.10:0,30,778	0/0:31,0:30:73.93:0,74,1768	0/0:19,0:19:54.17:0,54,1387	0/0:25,0:25:72.25:0,72,1911	1/1:0,22:22:54.18:1003,54,0	1/1:4,18:22:39.13:719,39,0	0/0:40,0:40:99:0,114,2936	0/0:24,0:24:72.25:0,72,1886	0/0:27,0:27:78.25:0,78,1962	0/0:16,0:16:45.15:0,45,1150	0/0:26,0:26:75.26:0,75,1995	0/0:28,0:28:84.28:0,84,2150	0/0:33,0:33:99:0,99,2463	0/0:30,0:30:84.29:0,84,2220	0/0:29,0:29:84.28:0,84,2149	0/0:39,0:39:99:0,117,2953	0/0:21,0:21:60.18:0,60,1453	0/0:17,0:17:50.38:0,50,1186	0/0:21,0:21:57.18:0,57,1430	0/0:57,0:57:99:0,166,4256	0/0:19,0:19:54.16:0,54,1234	0/0:20,0:20:60.21:0,60,1576	0/0:36,0:36:99:0,108,2883	0/0:20,0:20:54.18:0,54,1388	0/0:26,0:26:78.26:0,78,2041	0/0:24,0:24:66.23:0,66,1765	0/0:8,0:8:21.02:0,21,367
chr10	39270582	.	G	GAC	15244.41	PASS	AB=0.571;AC=37;AF=0.661;AN=56;BaseQRankSum=0.953;DP=862;FS=4.057;HRun=0;HaplotypeScore=148.6210;InbreedingCoeff=0.9133;MQ=60.92;MQ0=21;MQRankSum=1.861;QD=28.18;ReadPosRankSum=2.969;VQSLOD=6.1753;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:43:99:0,102,1216	1/1:2,6:8:15.05:247,15,0	0/0:62,0:18:18.53:0,19,223	0/0:71,0:33:50.03:0,50,528	1/1:1,17:18:36.12:598,36,0	1/1:10,15:24:36.12:595,36,0	1/1:12,21:33:54.17:840,54,0	1/1:8,36:44:99:1560,102,0	1/1:6,23:30:13.33:760,13,0	0/0:22,0:22:57.16:0,57,696	0/0:19,0:19:48.14:0,48,577	1/1:5,33:38:31.38:1058,31,0	0/0:24,0:24:56.84:0,57,678	0/0:27,0:27:56.84:0,57,718	1/1:14,26:40:56.31:1053,56,0	1/1:6,27:32:25.28:959,25,0	1/1:4,16:20:39.01:648,39,0	0/0:27,0:27:66.21:0,66,827	0/1:3,9:11:13.71:306,0,14	1/1:5,16:21:24.08:399,24,0	1/1:7,40:47:66.21:1071,66,0	1/1:1,19:19:32.99:548,33,0	1/1:4,16:20:27.09:449,27,0	1/1:6,40:45:17.94:1370,18,0	0/0:23,0:23:33.11:0,33,416	1/1:11,29:42:99:1507,99,0	1/1:4,28:32:60.12:979,60,0	1/1:3,8:11:18.06:299,18,0
chr10	39270625	.	T	TCA	6105.75	PASS	AB=1.000;AC=37;AF=0.661;AN=56;BaseQRankSum=9.316;DP=728;FS=3.372;HRun=0;HaplotypeScore=174.8731;InbreedingCoeff=0.8828;MQ=53.97;MQ0=25;MQRankSum=2.250;QD=12.80;ReadPosRankSum=-0.777;VQSLOD=4.3395;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:34:50.03:0,50,760	1/1:13,0:13:18.31:173,18,0	0/0:43,0:14:25.44:0,25,366	0/0:46,0:12:26.17:0,26,269	1/1:22,2:24:43.61:424,44,0	1/1:16,0:14:5.70:31,6,0	0/1:17,0:16:12.40:20,0,12	1/1:23,0:20:18.75:271,19,0	1/1:23,2:25:25.40:392,25,0	0/0:30,0:29:73.93:0,74,964	0/0:12,0:12:33.11:0,33,432	1/1:30,0:30:28.23:343,28,0	0/0:16,0:16:15.85:0,16,288	0/0:23,0:23:32.72:0,33,532	1/1:30,6:36:63.13:611,63,0	1/1:22,2:24:31.13:441,31,0	1/1:17,1:18:26.74:338,27,0	0/0:26,0:26:53.65:0,54,694	1/1:20,0:17:25.80:193,26,0	1/1:22,0:22:10.64:174,11,0	1/1:45,0:44:41.63:405,42,0	1/1:18,1:18:40.05:359,40,0	1/1:24,0:24:23.96:198,24,0	1/1:38,0:38:57.35:500,57,0	0/0:20,0:20:18.06:0,18,243	1/1:39,0:39:86.30:661,86,0	1/1:32,0:32:52.08:509,52,0	1/1:12,0:12:6.88:63,7,0
chr10	39270630	.	CAT	C	5028.24	PASS	AB=0.967;AC=29;AF=0.518;AN=56;BaseQRankSum=7.161;DP=699;FS=4.858;HRun=0;HaplotypeScore=168.1226;InbreedingCoeff=0.3518;MQ=54.23;MQ0=24;MQRankSum=1.104;QD=10.63;ReadPosRankSum=-2.989;VQSLOD=3.6277;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:32,1:32:39.60:40,0,832	0/1:12,0:12:0.95:91,0,1	0/0:43,0:14:29.52:0,30,374	0/0:42,0:10:22.26:0,22,215	0/1:23,2:25:33.16:185,0,33	0/0:15,0:13:3.73:0,4,28	0/1:15,0:14:18.34:18,0,28	1/1:21,0:18:19.07:233,19,0	0/1:25,0:25:18.29:212,0,18	0/0:29,0:28:45.64:0,46,932	0/0:14,0:14:29.74:0,30,469	1/1:24,4:28:53.61:450,54,0	0/0:15,0:15:14.68:0,15,306	0/0:24,0:24:44.43:0,44,667	0/1:34,2:36:99:308,0,113	1/1:22,0:22:25.42:299,25,0	0/1:15,1:16:56.20:121,0,56	0/0:24,0:24:24.94:0,25,578	1/1:19,1:18:28.16:268,28,0	0/1:20,2:22:3.60:174,0,4	1/1:40,1:41:21.02:431,21,0	0/1:19,0:18:38.49:163,0,38	1/1:15,8:23:23.33:197,23,0	1/1:35,2:37:74.61:627,75,0	0/0:20,0:20:18.04:0,18,268	1/1:35,1:36:88.90:750,89,0	1/1:32,0:32:3.63:366,4,0	1/1:10,0:10:8.02:98,8,0
chr10	39270634	.	CAG	C	797.66	PASS	AB=0.993;AC=16;AF=0.308;AN=52;BaseQRankSum=-1.839;DP=711;FS=1.688;HRun=0;HaplotypeScore=180.5744;InbreedingCoeff=0.4163;MQ=54.18;MQ0=25;MQRankSum=2.049;QD=3.18;ReadPosRankSum=0.195;VQSLOD=2.8665;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:35,0:36:65.50:65,0,360	0/0:11,0:11:3.48:0,3,44	./.	./.	0/0:24,0:24:11.39:0,11,300	0/0:14,0:14:20.56:0,21,161	0/0:20,0:19:8.97:0,9,74	0/0:16,0:13:2.13:0,2,5	0/0:24,0:24:20.53:0,21,218	1/1:18,11:28:9.20:298,9,0	1/1:9,5:15:5.85:47,6,0	1/1:24,2:27:14.93:115,15,0	0/0:16,0:16:2.60:0,3,10	0/0:18,0:26:5.74:0,6,38	0/0:35,0:35:14.01:0,14,387	0/0:22,0:22:11.81:0,12,153	0/0:16,0:17:3.49:0,3,257	1/1:13,8:23:20.65:178,21,0	0/1:18,0:16:23.94:24,0,35	0/0:22,1:23:14.97:0,15,258	0/0:43,0:43:9.15:0,9,235	0/0:19,0:19:26.61:0,27,269	1/1:13,7:21:1.40:5,1,0	1/1:34,2:36:26.40:199,26,0	0/0:16,0:30:5.94:0,6,43	0/1:36,0:36:16.92:17,0,90	0/0:30,0:30:21.76:0,22,216	0/1:9,0:9:13.62:14,0,42
chr10	39270723	.	TCATATCTAAGAA	T	2583.48	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.631;DP=724;FS=13.845;HRun=0;HaplotypeScore=248.5686;InbreedingCoeff=0.9996;MQ=91.78;MQ0=0;MQRankSum=-8.256;QD=71.76;ReadPosRankSum=0.177;VQSLOD=1.9761;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,135,8033	0/0:11,0:11:33.11:0,33,1991	0/0:29,0:29:81.28:0,81,4369	0/0:32,0:32:76.50:0,77,3451	0/0:28,0:28:78.27:0,78,4623	1/1:3,13:16:33.11:1184,33,0	1/1:2,18:20:42.14:1522,42,0	0/0:33,0:33:90.27:0,90,4654	0/0:23,0:23:69.24:0,69,3928	0/0:26,0:26:78.27:0,78,4542	0/0:15,0:15:42.14:0,42,2317	0/0:29,0:29:84.29:0,84,5076	0/0:23,0:23:69.24:0,69,4196	0/0:20,0:20:57.20:0,57,3502	0/0:40,0:40:99:0,111,6655	0/0:22,0:22:66.23:0,66,4068	0/0:21,0:21:57.20:0,57,3279	0/0:18,0:18:48.16:0,48,2808	0/0:28,0:28:78.25:0,78,4072	0/0:26,0:26:72.25:0,72,4097	0/0:42,0:42:99:0,117,6710	0/0:18,0:18:51.18:0,51,2949	0/0:19,0:19:57.20:0,57,3514	0/0:38,0:38:99:0,114,6239	0/0:29,0:29:75.26:0,75,4384	0/0:36,0:35:99:0,108,6465	0/0:24,0:24:69.24:0,69,4204	0/0:12,0:12:36.12:0,36,1679
chr10	39271889	.	GT	G	6654.89	PASS	AC=46;AF=0.852;AN=54;BaseQRankSum=-5.820;DP=373;FS=3.256;HRun=10;HaplotypeScore=39.4128;InbreedingCoeff=0.8297;MQ=70.18;MQ0=2;MQRankSum=-1.399;QD=19.92;ReadPosRankSum=1.696;VQSLOD=5.5001;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,16:20:44.98:391,45,0	1/1:1,9:10:23.99:208,24,0	0/0:11,0:8:6.02:0,6,66	0/0:7,0:5:3.01:0,3,33	1/1:5,10:15:26.90:226,27,0	0/0:3,0:14:31.40:0,31,167	0/0:1,0:7:11.36:0,11,57	1/1:5,31:35:86.89:735,87,0	1/1:0,5:5:15:130,15,0	1/1:8,19:27:56.96:489,57,0	1/1:3,12:15:35.99:313,36,0	1/1:1,8:9:23.95:201,24,0	1/1:0,6:6:18:156,18,0	1/1:2,8:10:20.99:182,21,0	1/1:0,13:13:35.99:313,36,0	1/1:1,8:9:18:156,18,0	1/1:7,22:29:57.11:539,57,0	1/1:2,15:17:41.99:364,42,0	1/1:6,17:23:20.80:410,21,0	1/1:3,8:11:23.95:202,24,0	1/1:3,4:7:8.99:78,9,0	1/1:3,2:4:6:52,6,0	1/1:1,4:5:8.83:78,9,0	./.	1/1:4,20:24:59.98:521,60,0	1/1:1,19:20:56.98:495,57,0	1/1:0,11:11:32.99:286,33,0	1/1:2,5:7:15:130,15,0
chr10	39272334	.	T	TCACACACA	6091.70	PASS	AB=0.735;AC=48;AF=0.923;AN=52;BaseQRankSum=-0.552;DP=624;FS=1.934;HRun=0;HaplotypeScore=205.1371;InbreedingCoeff=-0.0265;MQ=54.46;MQ0=13;MQRankSum=-2.042;QD=10.72;ReadPosRankSum=-0.223;VQSLOD=3.8543;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:34,0:40:0:0,0,0	1/1:11,0:11:8.99:221,9,0	./.	./.	1/1:12,0:15:2.69:121,3,0	1/1:26,0:26:5.93:111,6,0	1/1:15,0:15:9.01:176,9,0	1/1:28,0:27:5.99:60,6,0	1/1:15,2:16:6:147,6,0	1/1:23,0:23:21.07:510,21,0	1/1:17,0:19:6.02:226,6,0	1/1:21,7:29:18.06:676,18,0	1/1:13,3:19:15.05:602,15,0	1/1:15,3:21:18.06:569,18,0	1/1:11,1:17:12.03:373,12,0	1/1:18,4:24:12.04:431,12,0	1/1:16,4:20:12.04:438,12,0	1/1:18,0:21:6.02:209,6,0	1/1:7,0:11:9.01:112,9,0	0/1:13,0:21:62.69:67,0,63	1/1:21,0:40:14.97:122,15,0	1/1:21,4:28:6.02:163,6,0	1/1:15,0:19:2.98:64,3,0	1/1:22,4:27:2.53:122,3,0	1/1:10,0:10:6.02:168,6,0	1/1:12,0:18:18.60:196,19,0	0/1:15,0:24:0.36:107,0,0	0/1:7,0:17:10.63:101,0,11
chr10	39273224	.	A	AT	1092.40	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=3.058;DP=598;FS=0.000;HRun=9;HaplotypeScore=90.4548;InbreedingCoeff=0.9697;MQ=68.58;MQ0=0;MQRankSum=-0.700;QD=22.29;ReadPosRankSum=-0.629;VQSLOD=3.7004;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:46:99:0,113,1099	0/0:13,0:13:38.99:0,39,338	0/0:10,0:8:17.90:0,18,147	0/0:19,0:17:35.94:0,36,305	0/0:15,3:19:10.17:0,10,290	1/1:2,23:25:63.13:683,63,0	1/1:3,21:24:48.13:531,48,0	0/0:21,0:21:50.99:0,51,442	0/0:25,0:25:61.81:0,62,545	0/0:27,0:27:65.94:0,66,567	0/0:10,0:10:23.97:0,24,208	0/0:32,0:32:86.86:0,87,740	0/0:11,0:11:26.97:0,27,230	0/0:28,0:28:77.98:0,78,677	0/0:18,0:19:50:0,50,419	0/0:19,0:19:50.98:0,51,442	0/0:23,0:23:62.95:0,63,540	0/0:19,0:20:53.03:0,53,448	0/0:19,0:19:50.94:0,51,437	0/0:17,0:17:41.96:0,42,364	0/0:33,0:33:89.91:0,90,773	0/0:13,0:13:29.98:0,30,260	0/0:15,0:15:38.95:0,39,331	0/0:37,0:37:99:0,102,875	0/0:16,0:16:38.99:0,39,339	0/0:21,0:21:52.52:0,53,444	0/0:26,0:25:59.95:0,60,521	0/0:10,0:10:23.98:0,24,208
chr10	39273483	.	TA	T	1513.53	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.948;DP=699;FS=8.158;HRun=2;HaplotypeScore=66.1888;InbreedingCoeff=0.9978;MQ=82.29;MQ0=0;MQRankSum=-3.012;QD=31.53;ReadPosRankSum=1.189;VQSLOD=2.8138;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,108,1544	0/0:11,0:11:33.11:0,33,494	0/0:25,0:25:75.25:0,75,1098	0/0:26,0:26:75.25:0,75,1084	0/0:31,0:31:90.30:0,90,1346	1/1:0,19:19:54.18:701,54,0	1/1:0,29:29:72.23:934,72,0	0/0:44,0:44:99:0,126,1814	0/0:15,0:15:45.15:0,45,674	0/0:32,0:32:96.33:0,96,1438	0/0:22,0:22:66.22:0,66,989	0/0:26,0:26:72.23:0,72,1059	0/0:25,0:25:75.25:0,75,1120	0/0:22,0:22:66.20:0,66,966	0/0:27,0:27:78.26:0,78,1169	0/0:27,0:27:81.26:0,81,1193	0/0:28,0:28:84.27:0,84,1240	0/0:26,0:26:75.25:0,75,1117	0/0:15,0:15:42.14:0,42,607	0/0:23,0:23:66.22:0,66,982	0/0:33,0:33:93.32:0,93,1393	0/0:18,0:18:54.18:0,54,809	0/0:17,0:17:51.17:0,51,763	0/0:24,0:24:72.22:0,72,1037	0/0:25,0:25:75.23:0,75,1086	0/0:21,0:21:63.21:0,63,944	0/0:42,0:41:99:0,120,1797	0/0:7,0:7:21.07:0,21,314
chr10	39274111	.	G	GATCCCCACCCCC	3926.11	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-4.249;DP=693;FS=1.332;HRun=0;HaplotypeScore=277.9220;InbreedingCoeff=0.9908;MQ=81.62;MQ0=0;MQRankSum=-6.532;QD=70.11;ReadPosRankSum=-5.875;VQSLOD=1.8929;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:62,0:62:99:0,157,5319	0/0:6,0:6:18.06:0,18,616	0/0:17,0:17:41.99:0,42,970	0/0:22,0:22:35.05:0,35,1415	0/0:34,0:34:90.75:0,91,3161	1/1:8,7:26:39.09:1889,39,0	1/1:8,8:30:42.14:2037,42,0	0/0:20,0:20:33.01:0,33,1136	0/0:17,0:17:48.13:0,48,1560	0/0:29,0:29:80.52:0,81,2460	0/0:16,0:16:29.26:0,29,1273	0/0:38,0:38:99:0,104,3529	0/0:15,0:15:32.70:0,33,1175	0/0:29,0:29:74.92:0,75,2578	0/0:31,0:31:87.77:0,88,3097	0/0:25,0:25:65.34:0,65,2274	0/0:30,0:30:86.18:0,86,2742	0/0:15,0:15:39.61:0,40,1393	0/0:30,0:30:63.37:0,63,1925	0/0:14,0:14:32.60:0,33,1140	0/0:44,0:44:99:0,103,3602	0/0:29,0:29:76.97:0,77,2564	0/0:22,0:22:63.22:0,63,2189	0/0:26,0:26:68.70:0,69,2377	0/0:17,0:17:42.61:0,43,1398	0/0:23,0:23:65.83:0,66,2067	0/0:20,0:20:56.06:0,56,1910	0/0:6,0:6:18.06:0,18,477
chr10	39274265	.	ACTC	A	998.48	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.698;DP=623;FS=2.868;HRun=0;HaplotypeScore=87.5735;InbreedingCoeff=0.9986;MQ=88.47;MQ0=0;MQRankSum=-6.279;QD=35.66;ReadPosRankSum=-0.049;VQSLOD=3.8990;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,114,2486	0/0:10,0:10:30.09:0,30,649	0/0:34,0:33:96.18:0,96,1823	0/0:18,0:18:54.14:0,54,1176	0/0:14,0:14:42.14:0,42,966	1/1:2,9:11:27.09:458,27,0	1/1:0,17:17:39.13:661,39,0	0/0:34,0:34:99:0,99,2206	0/0:17,0:17:51.16:0,51,1127	0/0:22,0:22:63.13:0,63,1353	0/0:10,0:10:27.09:0,27,622	0/0:27,0:27:75.26:0,75,1727	0/0:14,0:14:39.08:0,39,847	0/0:21,0:21:60.20:0,60,1307	0/0:25,0:24:66.22:0,66,1457	0/0:22,0:22:63.15:0,63,1322	0/0:44,0:44:99:0,132,2882	0/0:22,0:22:66.23:0,66,1522	0/0:24,0:24:69.24:0,69,1586	0/0:19,0:19:54.17:0,54,1201	0/0:40,0:40:99:0,120,2676	0/0:17,0:17:51.16:0,51,1097	0/0:14,0:14:39.11:0,39,818	0/0:33,0:33:96.31:0,96,2141	0/0:18,0:18:48.15:0,48,1045	0/0:23,0:23:66.22:0,66,1467	0/0:17,0:17:51.09:0,51,1060	0/0:17,0:17:48.16:0,48,1083
chr10	39274421	.	C	CTGTGTG	507.32	PASS	AB=0.976;AC=11;AF=0.239;AN=46;BaseQRankSum=-2.129;DP=508;FS=1.741;HRun=0;HaplotypeScore=136.7979;InbreedingCoeff=0.1214;MQ=56.19;MQ0=12;MQRankSum=-1.812;QD=2.67;ReadPosRankSum=0.860;VQSLOD=2.1966;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:24:12.04:0,12,186	./.	./.	./.	0/1:24,0:23:8.68:9,0,63	0/1:8,2:9:0.01:0,0,1	0/0:20,4:22:1.43:0,1,44	./.	0/1:22,0:21:33.74:34,0,113	0/0:13,0:12:0.89:0,1,3	0/0:6,0:6:3.90:0,4,51	1/1:20,2:22:7.46:248,7,0	0/0:12,0:12:1.31:0,1,47	0/0:12,0:12:9.03:0,9,139	0/1:24,0:24:0.53:1,0,123	0/0:17,0:17:7.70:0,8,71	0/0:31,0:30:22:0,22,291	0/0:22,0:21:15.03:0,15,223	0/1:17,0:15:0:0,0,0	0/0:10,0:9:0.79:0,1,2	0/0:35,0:32:11.42:0,11,90	0/1:19,0:19:7.80:8,0,97	1/1:21,1:21:2.36:94,2,0	0/1:30,0:28:34.75:228,0,35	0/0:13,0:14:4.56:0,5,45	0/0:22,0:22:7.28:0,7,95	0/0:7,0:7:3.48:0,3,50	./.
chr10	39274480	.	A	AG	1204.72	PASS	AB=0.877;AC=35;AF=0.648;AN=54;BaseQRankSum=-0.239;DP=416;FS=4.403;HRun=10;HaplotypeScore=91.5697;InbreedingCoeff=0.4350;MQ=56.64;MQ0=35;MQRankSum=-1.747;QD=3.92;ReadPosRankSum=-3.907;VQSLOD=0.1581;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:15,2:14:14.75:130,15,0	0/0:6,1:7:2.09:0,2,22	0/0:24,0:11:24.35:0,24,198	0/0:19,0:11:26.49:0,26,195	1/1:7,3:10:5.97:51,6,0	0/0:11,0:8:6.96:0,7,41	./.	1/1:17,0:15:6.52:69,7,0	0/1:15,0:13:7.16:54,0,7	1/1:12,0:11:1.74:30,2,0	0/0:5,0:4:0.47:0,0,1	1/1:8,4:12:0.94:2,1,0	0/0:18,0:18:23.47:0,23,155	0/0:11,0:9:8.71:0,9,51	0/1:18,0:18:2.01:152,0,2	1/1:15,2:17:21.46:183,21,0	1/1:17,20:35:5.55:148,6,0	1/1:21,0:16:23.44:157,23,0	1/1:6,1:7:8.97:74,9,0	1/1:6,0:6:2.99:23,3,0	0/1:21,1:19:18.26:18,0,18	1/1:11,4:14:0.26:1,0,0	0/1:14,1:12:1.27:56,0,1	1/1:13,12:22:9:87,9,0	1/1:4,0:4:0.89:2,1,0	1/1:13,1:11:5.98:47,6,0	1/1:11,0:11:9.64:77,10,0	0/1:1,8:9:0:0,0,0
chr10	39275094	.	G	GA	1729.48	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-9.798;DP=686;FS=5.176;HRun=9;HaplotypeScore=118.0274;InbreedingCoeff=0.9695;MQ=82.29;MQ0=0;MQRankSum=-1.668;QD=24.02;ReadPosRankSum=1.475;VQSLOD=2.9401;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,114,990	0/0:7,0:7:21:0,21,182	0/0:21,0:21:38.95:0,39,336	0/0:21,0:22:7.57:0,8,206	0/0:26,1:27:35.79:0,36,536	1/1:2,24:26:66.18:730,66,0	1/1:6,14:21:27.91:511,28,0	0/0:28,0:28:67.98:0,68,570	0/0:25,2:27:26.81:0,27,462	0/0:36,0:36:89.96:0,90,779	0/0:24,1:25:29.96:0,30,488	0/0:26,0:26:71.97:0,72,625	0/0:20,1:21:23.77:0,24,428	0/0:18,0:18:50.99:0,51,443	0/0:26,0:26:62.96:0,63,544	0/0:22,0:22:56.91:0,57,487	0/0:37,0:37:99:0,111,955	0/0:18,0:18:41.96:0,42,360	0/0:18,0:19:40.38:0,40,327	0/0:19,0:19:50.98:0,51,442	0/0:21,0:21:59.90:0,60,505	0/0:31,0:31:71.97:0,72,625	0/0:11,0:11:32.99:0,33,286	0/0:30,0:32:94.05:0,94,790	1/1:4,21:25:57.15:631,57,0	0/0:35,2:37:35.59:0,36,764	0/0:29,0:29:74.02:0,74,631	0/0:13,0:13:35.98:0,36,308
chr10	39275408	.	CT	C	1436.54	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.002;DP=783;FS=2.033;HRun=2;HaplotypeScore=70.0769;InbreedingCoeff=0.9989;MQ=77.59;MQ0=1;MQRankSum=-0.492;QD=33.41;ReadPosRankSum=0.649;VQSLOD=3.7677;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,153,2231	0/0:13,0:13:36.12:0,36,540	0/0:16,0:16:43.25:0,43,563	0/0:22,0:22:57.19:0,57,828	0/0:26,0:26:78.25:0,78,1150	1/1:0,22:22:60.20:779,60,0	1/1:0,21:21:60.20:779,60,0	0/0:32,0:32:93.31:0,93,1390	0/0:28,0:28:78.26:0,78,1169	0/0:45,0:45:99:0,126,1851	0/0:26,0:26:78.24:0,78,1131	0/0:37,0:36:99:0,105,1556	0/0:31,0:31:90.29:0,90,1324	0/0:26,0:26:78.24:0,78,1119	0/0:46,0:46:99:0,135,1967	0/0:38,0:38:99:0,114,1689	0/0:29,0:29:87.29:0,87,1297	0/0:27,0:27:75.21:0,75,1099	0/0:16,0:16:42.14:0,42,630	0/0:30,0:30:90.29:0,90,1312	0/0:38,0:38:99:0,111,1638	0/0:18,0:18:51.16:0,51,746	0/0:17,0:17:51.16:0,51,744	0/0:33,0:33:99:0,99,1440	0/0:26,0:26:78.24:0,78,1147	0/0:31,0:31:93.32:0,93,1394	0/0:29,0:29:87.27:0,87,1265	0/0:8,0:8:24.08:0,24,360
chr10	39276936	.	GT	G	1211.47	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=10.258;DP=653;FS=0.000;HRun=3;HaplotypeScore=70.7487;InbreedingCoeff=0.9972;MQ=74.20;MQ0=0;MQRankSum=-7.970;QD=31.06;ReadPosRankSum=-3.163;VQSLOD=2.2248;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:90.26:0,90,1272	0/0:8,0:8:21.07:0,21,298	0/0:14,0:14:36.12:0,36,492	0/0:12,0:12:28.81:0,29,449	0/0:14,0:14:36.11:0,36,499	1/1:2,13:15:42.13:508,42,0	1/1:1,23:24:69.21:825,69,0	0/0:39,0:39:99:0,108,1553	0/0:28,0:28:84.28:0,84,1210	0/0:38,0:38:99:0,111,1579	0/0:16,0:16:48.16:0,48,688	0/0:24,0:24:72.24:0,72,1029	0/0:19,0:19:54.18:0,54,778	0/0:30,0:29:84.28:0,84,1209	0/0:27,0:27:81.26:0,81,1148	0/0:23,0:23:66.22:0,66,950	0/0:27,0:27:78.25:0,78,1101	0/0:21,0:21:60.20:0,60,864	0/0:28,0:28:81.24:0,81,1133	0/0:12,0:12:33.10:0,33,456	0/0:40,0:40:99:0,117,1630	0/0:19,0:19:51.17:0,51,734	0/0:19,0:19:57.19:0,57,821	0/0:36,0:36:99:0,108,1536	0/0:18,0:18:54.18:0,54,776	0/0:29,0:29:87.27:0,87,1214	0/0:26,0:25:78.26:0,78,1121	0/0:13,0:13:39.13:0,39,562
chr10	39276951	.	GT	G	1334.63	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=10.017;DP=643;FS=0.000;HRun=2;HaplotypeScore=69.2915;InbreedingCoeff=0.9988;MQ=77.69;MQ0=0;MQRankSum=-7.369;QD=31.78;ReadPosRankSum=-1.505;VQSLOD=2.8644;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:87.24:0,87,1236	0/0:8,0:8:24.08:0,24,358	0/0:16,0:16:48.15:0,48,659	0/0:14,0:14:42.08:0,42,545	0/0:14,0:14:39.11:0,39,545	1/1:1,15:16:48.14:605,48,0	1/1:1,25:26:66.21:851,66,0	0/0:38,0:38:99:0,114,1634	0/0:25,0:25:75.24:0,75,1103	0/0:32,0:32:96.25:0,96,1326	0/0:19,0:19:57.19:0,57,850	0/0:21,0:21:63.16:0,63,864	0/0:22,0:22:63.18:0,63,901	0/0:26,0:25:72.22:0,72,1039	0/0:24,0:24:72.19:0,72,1032	0/0:24,0:24:69.23:0,69,1032	0/0:25,0:25:75.24:0,75,1102	0/0:19,0:19:54.15:0,54,766	0/0:30,0:30:87.25:0,87,1256	0/0:16,0:16:48.16:0,48,718	0/0:42,0:42:99:0,126,1825	0/0:19,0:19:57.17:0,57,813	0/0:21,0:21:60.15:0,60,848	0/0:29,0:29:87.29:0,87,1299	0/0:22,0:22:66.22:0,66,969	0/0:26,0:26:75.25:0,75,1104	0/0:28,0:27:84.25:0,84,1214	0/0:11,0:11:33.10:0,33,475
chr10	39277151	.	CCT	C	95.99	PASS	AC=2;AF=0.037;AN=54;BaseQRankSum=2.588;DP=348;FS=0.000;HRun=0;HaplotypeScore=58.4100;InbreedingCoeff=0.7030;MQ=49.89;MQ0=40;MQRankSum=-3.101;QD=8.73;ReadPosRankSum=-0.558;VQSLOD=2.5771;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:13:33.58:0,34,576	0/0:10,0:8:21.07:0,21,385	0/0:9,0:4:9.03:0,9,157	0/0:13,0:7:16.25:0,16,221	0/0:11,0:10:20.82:0,21,385	./.	1/1:3,8:8:20.86:188,21,0	0/0:11,0:8:24.08:0,24,430	0/0:12,0:11:22.49:0,22,488	0/0:7,0:6:18.06:0,18,319	0/0:8,0:7:18.06:0,18,307	0/0:15,0:14:33.11:0,33,603	0/0:7,0:6:12.04:0,12,220	0/0:13,0:13:30.10:0,30,544	0/0:12,0:12:36.12:0,36,632	0/0:7,0:7:21.07:0,21,368	0/0:35,0:35:95.25:0,95,1608	0/0:21,0:20:50.84:0,51,868	0/0:11,0:5:15:0,15,230	0/0:5,0:4:12.04:0,12,220	0/0:29,0:23:46.13:0,46,770	0/0:6,0:6:12.04:0,12,220	0/0:2,0:2:6.02:0,6,110	0/0:31,0:28:75.25:0,75,1312	0/0:9,0:9:9.02:0,9,113	0/0:7,0:5:15.05:0,15,274	0/0:15,0:14:33.11:0,33,602	0/0:9,0:8:16.83:0,17,376
chr10	39277717	.	AAACC	A	12620.55	PASS	AB=0.600;AC=33;AF=0.589;AN=56;BaseQRankSum=9.422;DP=571;FS=1.086;HRun=0;HaplotypeScore=116.3075;InbreedingCoeff=0.9169;MQ=70.73;MQ0=0;MQRankSum=-4.517;QD=37.45;ReadPosRankSum=1.066;VQSLOD=5.0754;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,105,2634	1/1:1,6:7:18.06:313,18,0	0/0:19,0:19:48.15:0,48,1143	0/0:27,0:27:51.17:0,51,1166	1/1:5,20:25:54.01:800,54,0	0/0:15,0:15:45.15:0,45,833	0/0:21,0:21:60.21:0,60,1107	1/1:8,22:30:66.13:948,66,0	1/1:7,14:21:48.16:834,48,0	0/0:20,0:20:51.16:0,51,1238	0/0:18,0:18:45.15:0,45,1104	1/1:3,10:13:30.07:490,30,0	0/0:20,0:20:54.18:0,54,1315	0/0:19,0:19:51.17:0,51,1261	1/1:2,17:19:54.11:876,54,0	1/1:4,18:22:60.16:984,60,0	1/1:6,17:23:51.17:887,51,0	0/0:18,0:18:45.15:0,45,1091	1/1:2,14:16:42.13:696,42,0	1/1:4,19:23:57.03:863,57,0	1/1:1,8:9:9.02:157,9,0	1/1:4,15:19:42.02:634,42,0	1/1:4,15:19:35.99:529,36,0	1/1:3,20:23:37.37:675,37,0	0/0:16,0:16:48.16:0,48,1150	0/1:7,14:21:98.27:743,0,98	1/1:5,29:33:93.32:1607,93,0	1/1:3,10:13:39.03:584,39,0
chr10	39277779	.	GA	G	7041.87	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=5.511;DP=560;FS=1.175;HRun=10;HaplotypeScore=91.4642;InbreedingCoeff=0.9664;MQ=70.51;MQ0=0;MQRankSum=-2.750;QD=20.06;ReadPosRankSum=-0.841;VQSLOD=4.9978;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:93.23:0,93,1013	1/1:1,4:5:12:104,12,0	0/0:17,0:18:4.66:0,5,172	0/0:13,0:14:20.84:0,21,222	1/1:4,25:29:74.97:651,75,0	0/0:22,0:22:57.15:0,57,631	0/0:18,0:19:44.95:0,45,479	1/1:5,29:35:82.98:701,83,0	1/1:5,16:21:44.97:391,45,0	0/0:22,1:22:28.09:0,28,538	0/0:13,0:13:33.08:0,33,358	1/1:2,15:17:41.99:365,42,0	0/0:14,0:14:36.10:0,36,398	0/0:15,0:15:39.09:0,39,423	1/1:5,22:27:65.98:573,66,0	1/1:2,24:26:71.98:625,72,0	1/1:1,14:15:32.98:286,33,0	0/0:21,0:21:48.13:0,48,531	1/1:9,7:16:26.96:231,27,0	1/1:8,19:27:23.79:436,24,0	1/1:1,5:6:8.99:78,9,0	1/1:2,16:18:44.98:391,45,0	1/1:4,23:28:61.97:523,62,0	1/1:6,10:16:26.96:230,27,0	0/0:16,0:16:45.12:0,45,498	1/1:3,22:25:65.97:573,66,0	1/1:1,27:28:74.87:651,75,0	1/1:3,9:12:26.99:234,27,0
chr10	39278504	.	TA	T	658.27	PASS	AB=0.886;AC=9;AF=0.161;AN=56;BaseQRankSum=4.639;DP=520;FS=0.000;HRun=11;HaplotypeScore=70.8999;InbreedingCoeff=0.3040;MQ=65.20;MQ0=5;MQRankSum=-1.560;QD=5.27;ReadPosRankSum=0.346;VQSLOD=1.3103;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:47.66:0,48,700	0/1:2,1:3:18.61:19,0,26	0/1:28,2:10:32.52:33,0,67	0/1:31,3:22:22.70:23,0,164	0/0:31,0:31:81.19:0,81,852	1/1:0,12:12:32.96:271,33,0	1/1:2,18:20:50.94:419,51,0	0/0:18,0:17:42.09:0,42,434	0/0:9,0:9:15.04:0,15,160	0/0:19,0:19:42.11:0,42,447	0/0:16,0:16:36.07:0,36,371	0/0:11,0:11:27.03:0,27,275	0/0:13,0:13:24.06:0,24,253	0/0:10,1:11:8.43:0,8,283	0/0:12,1:13:5.43:0,5,264	0/0:11,1:12:5.44:0,5,263	0/0:28,1:29:20.45:0,20,411	0/0:27,0:27:69.10:0,69,711	0/0:24,0:25:56.90:0,57,568	0/0:10,0:10:18.01:0,18,179	0/1:9,1:10:0.50:0,0,200	0/0:10,0:10:21.05:0,21,222	0/1:14,1:15:39.89:40,0,222	0/0:21,0:21:48.12:0,48,511	0/0:17,1:18:26.48:0,26,481	0/0:26,0:27:59.98:0,60,620	0/0:27,1:28:38.59:0,39,608	0/0:15,0:15:2.93:0,3,316
chr10	39278569	.	G	GGGGTGTGTGTGTGTGTGT	10881.07	PASS	AB=0.920;AC=38;AF=0.704;AN=54;BaseQRankSum=-0.745;DP=449;FS=8.585;HRun=0;HaplotypeScore=195.3401;InbreedingCoeff=0.2410;MQ=53.03;MQ0=15;MQRankSum=-4.005;QD=31.27;ReadPosRankSum=-3.639;VQSLOD=2.3932;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:25:99:276,0,568	./.	0/0:34,0:13:30.31:0,30,520	0/0:38,0:13:24.28:0,24,691	1/1:16,0:16:15.04:270,15,0	0/1:12,0:12:84.37:219,0,84	0/1:15,0:14:39.80:307,0,40	1/1:26,0:19:41.60:733,42,0	1/1:10,0:9:13.56:370,14,0	0/1:24,0:24:99:1327,0,525	0/0:10,0:9:9.01:0,9,147	1/1:21,0:21:44.20:540,44,0	0/1:14,0:14:99:486,0,223	0/1:11,0:12:99:235,0,298	1/1:3,9:12:12.51:974,13,0	1/1:6,0:6:14.95:194,15,0	0/1:4,7:24:29.55:271,0,30	0/1:17,0:18:99:787,0,576	1/1:16,0:12:35.98:821,36,0	1/1:3,5:10:14.88:343,15,0	1/1:14,0:12:15.30:210,15,0	1/1:10,0:10:5.74:48,6,0	1/1:11,0:11:20.91:211,21,0	1/1:12,0:12:18.31:170,18,0	0/0:18,0:17:25.78:0,26,436	1/1:19,0:19:53.94:1384,54,0	1/1:14,0:13:35.89:579,36,0	1/1:4,0:4:9.02:126,9,0
chr10	39278799	.	A	ATTTTT	1265.73	PASS	AB=0.923;AC=26;AF=0.464;AN=56;BaseQRankSum=-0.718;DP=247;FS=0.000;HRun=0;HaplotypeScore=62.4797;InbreedingCoeff=0.4366;MQ=68.62;MQ0=17;MQRankSum=-1.967;QD=10.37;ReadPosRankSum=-0.837;VQSLOD=1.6931;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:14:4.24:0,4,373	0/0:1,0:1:0.89:0,1,2	0/0:27,0:15:32.86:0,33,593	0/0:16,0:4:11.80:0,12,112	0/1:7,0:6:16.36:16,0,27	0/0:9,0:9:23.90:0,24,223	0/0:5,0:5:14.81:0,15,137	0/1:17,0:16:3.05:37,0,3	0/1:7,0:7:1.28:99,0,1	0/0:10,0:9:15.77:0,16,198	0/0:2,0:2:5.69:0,6,64	1/1:10,1:11:20.18:225,20,0	0/0:9,0:9:17.96:0,18,233	0/0:6,0:6:15.05:0,15,211	0/1:4,0:6:1.79:57,0,2	1/1:2,3:4:2.32:70,2,0	0/1:14,0:16:20.60:225,0,21	0/0:14,0:11:22.49:0,22,305	0/1:8,0:8:2.07:81,0,2	1/1:3,0:2:2.29:6,2,0	1/1:7,0:7:1.28:24,1,0	1/1:1,0:1:0.47:1,0,0	1/1:2,0:1:3:27,3,0	1/1:4,0:5:2.20:78,2,0	0/0:11,0:11:27.09:0,27,517	1/1:4,1:11:7.72:213,8,0	1/1:7,0:6:10.78:157,11,0	1/1:5,0:5:14.93:119,15,0
chr10	39278800	.	A	AT	1636.91	PASS	AB=0.893;AC=48;AF=0.857;AN=56;BaseQRankSum=1.030;DP=331;FS=5.802;HRun=17;HaplotypeScore=92.3029;InbreedingCoeff=0.5329;MQ=60.44;MQ0=21;MQRankSum=-4.380;QD=5.91;ReadPosRankSum=-2.837;VQSLOD=1.7741;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,8:16:7.48:113,7,0	1/1:3,0:3:5.68:28,6,0	0/0:27,0:15:5.38:0,5,63	0/0:16,0:4:5.43:0,5,25	1/1:18,0:16:22.51:111,23,0	0/1:9,0:9:0:0,0,0	1/1:5,0:5:0.47:1,0,0	1/1:30,0:28:44.06:217,44,0	1/1:8,0:8:10.99:53,11,0	0/1:8,0:10:1:42,0,1	1/1:3,0:4:8.69:47,9,0	1/1:16,0:16:26.18:119,26,0	1/1:5,3:10:11.74:76,12,0	1/1:3,1:7:14.31:74,14,0	1/1:9,0:8:11.36:57,11,0	1/1:9,0:8:11.42:59,11,0	1/1:24,0:22:15.30:116,15,0	1/1:15,0:14:5.18:48,5,0	1/1:15,0:15:23:127,23,0	1/1:6,0:5:12.31:60,12,0	1/1:11,0:11:9.09:48,9,0	1/1:4,0:4:6.22:30,6,0	1/1:7,0:5:11.43:58,11,0	1/1:6,0:6:5.64:27,6,0	0/0:7,0:11:5.97:0,6,17	1/1:13,0:13:26.01:129,26,0	1/1:11,0:9:14.28:74,14,0	1/1:7,0:6:8.56:44,9,0
chr10	39278829	.	T	TC	1029.08	PASS	AB=0.696;AC=10;AF=0.217;AN=46;BaseQRankSum=-0.926;DP=238;FS=1.670;HRun=1;HaplotypeScore=38.5415;InbreedingCoeff=0.4010;MQ=39.05;MQ0=30;MQRankSum=-1.411;QD=13.03;ReadPosRankSum=1.465;VQSLOD=2.5201;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,11:17:19.55:310,20,0	0/0:2,0:2:6.02:0,6,73	./.	./.	0/0:11,0:9:15.05:0,15,192	./.	./.	0/0:17,0:14:39.03:0,39,448	0/0:6,0:6:12.04:0,12,155	0/1:3,7:8:20.76:179,0,21	1/1:1,4:5:8.94:102,9,0	0/0:12,0:11:33.02:0,33,388	0/1:5,5:8:24.95:87,0,25	0/1:4,7:10:50.30:266,0,50	0/0:8,0:8:21.06:0,21,259	0/0:9,0:8:20.69:0,21,257	0/0:23,0:19:51.11:0,51,613	1/1:7,7:11:15.05:212,15,0	0/0:13,0:13:36.06:0,36,423	0/0:6,0:5:9.03:0,9,115	0/0:10,0:9:15.02:0,15,166	0/0:4,0:4:8.99:0,9,97	./.	0/0:5,0:4:11.96:0,12,121	0/0:8,0:7:18.06:0,18,232	0/1:10,1:10:21.70:22,0,200	0/0:10,0:8:23.95:0,24,244	0/0:5,0:4:9.03:0,9,116
chr10	39279193	.	AAAAC	A	770.79	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=3.233;DP=532;FS=13.452;HRun=0;HaplotypeScore=100.4298;InbreedingCoeff=0.9283;MQ=56.88;MQ0=7;MQRankSum=2.822;QD=24.86;ReadPosRankSum=0.930;VQSLOD=2.8282;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:68.33:0,68,339	0/0:3,0:3:6.02:0,6,147	0/0:29,0:14:23.99:0,24,325	0/0:26,0:15:30.57:0,31,665	0/0:16,0:16:45.15:0,45,1063	1/1:1,16:17:36.12:599,36,0	1/1:3,11:14:18.06:291,18,0	0/0:40,0:40:77.93:0,78,1494	0/0:17,0:17:39.13:0,39,875	0/0:18,0:18:38.16:0,38,200	0/0:12,0:12:15.63:0,16,90	0/0:16,0:16:42.13:0,42,969	0/0:15,0:15:28.36:0,28,138	0/0:13,0:13:34.26:0,34,187	0/0:10,0:10:24.08:0,24,562	0/0:14,0:14:33.11:0,33,769	0/0:24,0:24:60.20:0,60,1407	0/0:34,0:34:65.34:0,65,316	0/0:27,0:27:54.18:0,54,1151	0/0:8,0:8:21.07:0,21,478	0/0:25,0:24:66.22:0,66,1512	0/0:15,0:15:33.11:0,33,810	0/0:9,0:9:24.08:0,24,556	0/0:36,0:36:81.28:0,81,1866	0/0:17,0:17:48.16:0,48,1172	0/0:24,0:24:63.22:0,63,1533	0/0:13,0:13:33.11:0,33,728	0/0:6,0:6:18.06:0,18,443
chr10	39279213	.	CAA	C	4517.75	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=13.748;DP=561;FS=5.726;HRun=4;HaplotypeScore=66.8449;InbreedingCoeff=0.8421;MQ=58.46;MQ0=8;MQRankSum=1.614;QD=31.59;ReadPosRankSum=5.044;VQSLOD=3.8548;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,31:31:75.25:1103,75,0	0/0:2,0:2:6.02:0,6,110	0/0:26,0:17:47.47:0,47,656	0/0:34,0:23:60.12:0,60,861	0/0:18,0:18:54.18:0,54,948	0/1:17,0:17:24.09:27,0,24	0/0:15,0:15:1.54:0,2,168	0/0:42,0:42:99:0,113,1836	0/0:14,0:14:42.14:0,42,761	1/1:0,20:20:60.19:863,60,0	1/1:0,12:12:36.12:495,36,0	0/0:15,0:15:45.15:0,45,818	1/1:2,13:13:33.11:486,33,0	1/1:1,13:14:36.12:530,36,0	0/0:14,0:14:42.13:0,42,679	0/0:16,0:16:45.15:0,45,781	0/0:28,0:28:78.24:0,78,1293	1/1:0,32:31:69.23:1015,69,0	0/0:27,0:26:75.21:0,75,1211	0/0:9,0:9:24.08:0,24,448	0/0:32,0:32:93.29:0,93,1514	0/0:17,0:17:51.17:0,51,878	0/0:9,0:9:27.08:0,27,446	0/0:33,0:33:99:0,99,1683	0/0:18,0:18:54.18:0,54,962	0/0:28,0:28:84.27:0,84,1467	0/0:14,0:14:36.12:0,36,636	0/0:6,0:6:18.06:0,18,337
chr10	39279806	.	G	GT	1134.69	PASS	AB=0.996;AC=13;AF=0.232;AN=56;BaseQRankSum=9.513;DP=495;FS=8.772;HRun=7;HaplotypeScore=90.2695;InbreedingCoeff=0.1503;MQ=68.99;MQ0=1;MQRankSum=-4.899;QD=4.87;ReadPosRankSum=-0.359;VQSLOD=-0.0111;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:29:54.62:59,0,55	0/0:11,0:11:33.01:0,33,302	0/1:38,0:13:28.68:29,0,96	0/1:28,0:11:4.54:5,0,34	0/0:23,0:23:48.05:0,48,468	1/1:2,23:25:60.60:690,61,0	1/1:10,5:15:32.37:305,32,0	0/0:21,0:21:47.96:0,48,439	0/0:9,0:9:20.38:0,20,173	0/1:23,0:23:2.80:47,0,3	0/1:21,0:21:21.16:72,0,21	0/0:8,0:7:11.81:0,12,111	0/1:7,0:7:20.32:20,0,36	0/1:9,0:9:15.16:15,0,33	0/0:15,0:15:27.04:0,27,260	0/0:16,0:16:33.04:0,33,314	0/0:27,0:27:66.06:0,66,621	0/1:14,0:14:19.66:22,0,20	0/0:15,0:15:42.02:0,42,389	0/0:22,0:22:51.09:0,51,523	0/0:8,0:8:18.01:0,18,167	0/0:4,0:4:8.99:0,9,78	0/0:13,0:13:30.02:0,30,278	0/0:9,0:9:18.03:0,18,174	0/1:23,0:23:24.27:36,0,24	0/0:35,0:35:56.49:0,56,637	0/0:16,0:16:32.94:0,33,292	0/0:10,0:10:9.01:0,9,83
chr10	39279811	.	T	TA	1726.19	PASS	AB=0.900;AC=13;AF=0.232;AN=56;BaseQRankSum=10.217;DP=520;FS=11.123;HRun=0;HaplotypeScore=92.2835;InbreedingCoeff=0.7331;MQ=67.60;MQ0=2;MQRankSum=-4.177;QD=11.74;ReadPosRankSum=2.825;VQSLOD=3.7489;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:13,16:31:17.60:433,18,0	0/0:11,0:11:33.11:0,33,459	0/0:48,0:15:24.95:0,25,220	0/0:35,0:12:21.56:0,22,157	0/0:24,0:24:60.07:0,60,773	0/1:26,0:26:2.65:161,0,3	0/1:15,0:15:20.58:21,0,58	0/0:29,0:29:78.19:0,78,946	0/0:9,0:9:21.06:0,21,280	1/1:7,16:23:26.35:423,26,0	1/1:4,14:21:39.08:456,39,0	0/0:8,0:7:11.84:0,12,166	0/1:4,3:7:3.08:96,0,3	1/1:7,2:9:7.10:118,7,0	0/0:15,0:15:30.09:0,30,403	0/0:17,0:17:39.11:0,39,512	0/0:28,0:28:72.21:0,72,971	1/1:3,11:14:20.51:197,21,0	0/0:14,0:14:42.14:0,42,585	0/0:20,0:20:60.16:0,60,811	0/0:8,0:8:21.06:0,21,276	0/0:3,0:3:9.03:0,9,124	0/0:11,0:11:30.10:0,30,418	0/0:9,0:9:20.90:0,21,265	0/0:22,0:22:58.83:0,59,541	0/0:33,0:33:72.99:0,73,1125	0/0:18,0:18:42.07:0,42,511	0/0:11,0:11:12.01:0,12,146
chr10	39279813	.	T	TAAA	3230.05	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=5.415;DP=525;FS=3.376;HRun=10;HaplotypeScore=110.2442;InbreedingCoeff=0.9419;MQ=68.14;MQ0=3;MQRankSum=-4.799;QD=29.36;ReadPosRankSum=-1.514;VQSLOD=2.5471;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:30,1:32:75.92:939,76,0	0/0:11,0:11:30.05:0,30,349	0/0:49,0:17:19.51:0,20,178	0/0:33,0:12:11.50:0,12,75	0/0:24,0:24:57.14:0,57,720	0/0:26,0:26:64.26:0,64,416	0/0:13,0:13:20.69:0,21,158	0/0:28,0:29:72.12:0,72,841	0/0:9,0:9:15.02:0,15,164	1/1:24,2:26:68.80:975,69,0	1/1:19,2:21:57.64:753,58,0	0/0:8,0:7:8.97:0,9,109	1/1:8,1:9:20.07:250,20,0	1/1:7,1:8:15.14:142,15,0	0/0:15,0:15:30.06:0,30,353	0/0:16,0:16:33.08:0,33,389	0/0:29,0:29:61.44:0,61,760	1/1:13,1:13:28.60:358,29,0	0/0:14,0:14:36.10:0,36,430	0/0:19,0:20:52.71:0,53,654	0/0:7,0:7:15.03:0,15,182	0/0:3,0:3:9.03:0,9,109	0/0:11,0:11:27.08:0,27,328	0/0:9,0:9:21.06:0,21,248	0/0:22,0:22:57.10:0,57,663	0/0:31,1:33:15.41:0,15,799	0/0:19,0:19:39.07:0,39,441	0/0:11,0:11:9.01:0,9,108
chr10	39279858	.	T	TTTC	5477.28	PASS	AB=0.849;AC=33;AF=0.589;AN=56;BaseQRankSum=-12.348;DP=529;FS=14.530;HRun=0;HaplotypeScore=106.3729;InbreedingCoeff=0.7502;MQ=59.74;MQ0=21;MQRankSum=4.610;QD=17.56;ReadPosRankSum=5.360;VQSLOD=3.4706;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:95.46:0,95,985	1/1:3,6:9:14.94:251,15,0	0/0:54,0:17:20.63:0,21,224	0/1:37,0:12:11.01:11,0,63	1/1:6,25:31:64.30:837,64,0	0/0:21,0:21:55.43:0,55,634	0/0:11,0:10:27.88:0,28,319	1/1:23,0:22:26.14:324,26,0	0/1:2,4:8:5.15:167,0,5	0/0:20,0:20:60:0,60,617	0/0:19,0:19:53.23:0,53,506	1/1:0,5:7:3.01:56,3,0	0/0:10,0:10:28.98:0,29,266	0/0:7,0:7:15.02:0,15,218	1/1:2,11:13:16.40:336,16,0	1/1:0,10:11:15.05:282,15,0	1/1:6,20:25:45.06:783,45,0	0/0:17,0:14:35.90:0,36,348	1/1:27,0:23:55.05:455,55,0	1/1:20,2:20:41.67:361,42,0	0/1:5,0:3:10.04:18,0,10	1/1:2,6:7:9.01:136,9,0	1/1:2,9:11:21.03:351,21,0	1/1:8,1:9:12.80:140,13,0	0/0:20,0:20:47.91:0,48,465	1/1:29,1:27:6.85:539,7,0	1/1:20,1:21:36.51:291,37,0	1/1:13,0:12:17.94:140,18,0
chr10	39279859	.	T	TTC	5105.92	PASS	AB=0.857;AC=32;AF=0.571;AN=56;BaseQRankSum=-11.630;DP=531;FS=19.216;HRun=0;HaplotypeScore=100.9176;InbreedingCoeff=0.7672;MQ=58.52;MQ0=22;MQRankSum=4.274;QD=18.37;ReadPosRankSum=5.278;VQSLOD=3.0259;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:89.30:0,89,904	1/1:8,1:9:14.87:156,15,0	0/0:54,0:17:11.59:0,12,246	0/0:36,0:10:4.07:0,4,60	1/1:32,1:32:66.39:583,66,0	0/0:21,0:21:56.25:0,56,577	0/0:11,0:10:17.37:0,17,264	1/1:8,14:22:11.67:375,12,0	0/1:9,0:9:4.96:101,0,5	0/0:20,0:20:59.89:0,60,584	0/0:19,0:19:43.97:0,44,481	1/1:7,0:7:3:27,3,0	0/0:10,0:10:29.59:0,30,251	0/0:7,0:7:15.02:0,15,197	1/1:13,0:13:20.97:183,21,0	1/1:11,0:11:15.01:137,15,0	1/1:25,1:25:44.69:429,45,0	0/0:17,0:14:41.49:0,41,367	1/1:6,20:22:53.86:699,54,0	1/1:4,19:21:43.59:483,44,0	0/1:3,2:3:12.78:40,0,13	1/1:7,1:7:9.01:100,9,0	1/1:9,1:10:21.04:227,21,0	1/1:9,0:9:0.52:40,1,0	0/0:20,0:20:47.95:0,48,457	1/1:7,24:29:15.15:780,15,0	1/1:5,16:21:38.53:475,39,0	1/1:1,12:12:18.06:271,18,0
chr10	39279860	.	T	TC	2173.83	PASS	AB=0.982;AC=29;AF=0.518;AN=56;BaseQRankSum=-8.910;DP=523;FS=19.356;HRun=0;HaplotypeScore=104.1531;InbreedingCoeff=0.5318;MQ=58.33;MQ0=23;MQRankSum=3.958;QD=7.08;ReadPosRankSum=5.773;VQSLOD=2.1021;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:91.74:0,92,717	0/1:9,0:9:20.09:49,0,20	0/0:53,0:17:7.12:0,7,207	0/1:35,0:9:6.72:7,0,73	1/1:33,0:32:59.01:331,59,0	0/0:22,0:22:57.47:0,57,521	0/0:12,0:10:29.92:0,30,272	0/1:17,2:18:0.95:261,0,1	0/1:9,0:9:7.92:29,0,8	0/0:20,0:20:55.16:0,55,516	0/0:19,0:19:50.74:0,51,445	1/1:7,0:7:2.80:13,3,0	0/0:10,0:10:26.93:0,27,208	0/0:7,0:7:15.01:0,15,172	1/1:13,0:13:8.66:67,9,0	1/1:12,0:12:13.89:65,14,0	1/1:24,0:23:21.36:166,21,0	0/0:17,0:14:40.42:0,40,322	1/1:24,2:22:38.71:350,39,0	1/1:22,0:20:41.01:213,41,0	0/1:4,0:2:7.27:10,0,7	1/1:9,0:8:8.35:40,8,0	1/1:10,0:10:19.86:106,20,0	0/1:8,0:8:6.02:6,0,16	0/0:19,0:19:47.92:0,48,425	0/1:32,1:30:9.98:358,0,10	1/1:20,2:22:29.22:215,29,0	1/1:12,0:11:17.12:88,17,0
chr10	39279869	.	TTTCC	T	903.33	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.357;DP=482;FS=20.960;HRun=0;HaplotypeScore=117.2484;InbreedingCoeff=0.8406;MQ=54.13;MQ0=24;MQRankSum=-5.621;QD=30.11;ReadPosRankSum=2.072;VQSLOD=2.1358;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:90.30:0,90,1479	0/0:11,0:11:24.65:0,25,539	0/0:42,0:11:18.95:0,19,279	0/0:26,0:6:8.03:0,8,139	0/0:25,0:24:48.01:0,48,878	1/1:10,8:18:44.96:671,45,0	1/1:4,8:9:20.92:352,21,0	0/0:16,0:13:39.08:0,39,622	0/0:9,0:9:20.59:0,21,322	0/0:20,0:20:57.17:0,57,828	0/0:21,0:21:51:0,51,744	0/0:8,0:8:9.03:0,9,165	0/0:12,0:12:30.10:0,30,474	0/0:8,0:8:12.04:0,12,274	0/0:13,0:13:27.02:0,27,528	0/0:13,0:13:27.09:0,27,523	0/0:25,0:24:54.18:0,54,1161	0/0:18,0:15:33.11:0,33,552	0/0:16,0:14:34.72:0,35,598	0/0:21,0:19:44.17:0,44,825	0/0:5,0:3:5.98:0,6,92	0/0:8,0:7:12.04:0,12,218	0/0:12,0:12:26.91:0,27,510	0/0:8,0:8:12.04:0,12,238	0/0:17,0:17:39.13:0,39,660	0/0:33,0:30:83.72:0,84,1451	0/0:21,0:21:38.51:0,39,807	0/0:9,0:8:18.06:0,18,424
chr10	39279871	.	T	TC	1518.42	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=-2.802;DP=466;FS=6.046;HRun=3;HaplotypeScore=94.7146;InbreedingCoeff=0.7991;MQ=53.29;MQ0=23;MQRankSum=1.112;QD=10.92;ReadPosRankSum=-3.690;VQSLOD=0.3513;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:21,13:35:71.34:654,71,0	0/0:12,0:12:29.30:0,29,185	0/0:36,1:10:1.20:0,1,42	0/1:24,0:5:0.36:0,0,61	0/0:25,0:24:37.46:0,37,202	0/0:12,0:16:34.97:0,35,119	0/0:10,0:7:15.54:0,16,49	0/0:14,0:12:26.36:0,26,178	0/0:7,0:7:13.59:0,14,72	1/1:16,3:19:34.79:327,35,0	1/1:15,6:21:29.96:252,30,0	0/0:11,0:11:11.49:0,11,86	1/1:9,3:12:20.91:187,21,0	1/1:4,1:10:0.47:1,0,0	0/0:10,0:10:19.90:0,20,120	0/0:12,0:12:19.11:0,19,122	0/0:26,0:25:51.15:0,51,269	1/1:12,3:13:29.59:267,30,0	0/0:16,0:14:29.71:0,30,141	0/0:19,0:18:38.57:0,39,218	0/0:5,0:3:2.92:0,3,17	0/0:9,0:8:13.91:0,14,86	0/0:12,0:12:16.86:0,17,92	0/0:8,0:8:9.20:0,9,43	0/0:17,0:17:38.56:0,39,281	0/0:30,0:27:67.94:0,68,439	0/0:20,0:20:29.76:0,30,138	0/0:11,0:10:19.58:0,20,111
chr10	39279893	.	CAGGGCCTTGCGCTTCCT	C	2564.35	PASS	AC=4;AF=0.077;AN=52;BaseQRankSum=6.705;DP=421;FS=4.649;HRun=0;HaplotypeScore=195.5039;InbreedingCoeff=0.9253;MQ=48.71;MQ0=19;MQRankSum=-5.796;QD=75.42;ReadPosRankSum=1.525;VQSLOD=3.0462;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:81.28:0,81,5748	0/0:14,0:14:36.12:0,36,2814	./.	./.	0/0:22,0:21:46.10:0,46,2241	1/1:4,10:14:30.10:1337,30,0	1/1:3,17:16:30.10:1347,30,0	0/0:13,0:10:24.08:0,24,1654	0/0:9,0:9:21.07:0,21,1344	0/0:20,0:20:57.20:0,57,4296	0/0:15,0:14:37.01:0,37,2943	0/0:14,0:14:36.12:0,36,2946	0/0:11,0:11:30.10:0,30,2470	0/0:8,0:8:6.02:0,6,499	0/0:10,0:10:24.08:0,24,1873	0/0:12,0:12:21.07:0,21,1293	0/0:30,0:29:66.23:0,66,4680	0/0:25,0:22:69.24:0,69,5418	0/0:13,0:11:30.10:0,30,2045	0/0:16,0:15:33.07:0,33,1917	0/0:9,0:7:18.06:0,18,1182	0/0:11,0:10:18.06:0,18,1290	0/0:12,0:12:24.07:0,24,1504	0/0:10,0:10:18.06:0,18,1106	0/0:17,0:17:42.14:0,42,3184	0/0:29,0:26:69.24:0,69,5431	0/0:17,0:17:36.12:0,36,2211	0/0:7,0:6:18.06:0,18,1157
chr10	39279988	.	TGGCTGTC	T	15417.81	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=11.057;DP=458;FS=13.335;HRun=0;HaplotypeScore=120.2486;InbreedingCoeff=0.9760;MQ=57.97;MQ0=7;MQRankSum=-14.823;QD=63.71;ReadPosRankSum=1.175;VQSLOD=4.0077;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,114,4554	1/1:0,5:5:6.02:167,6,0	0/0:23,0:13:36.07:0,36,887	0/0:22,0:13:30.10:0,30,1075	1/1:0,17:17:36:786,36,0	0/0:17,0:17:48.16:0,48,1833	0/0:20,0:20:60.21:0,60,2400	1/1:0,16:16:45.11:1192,45,0	1/1:0,11:11:30.10:838,30,0	0/0:18,0:18:54.18:0,54,2064	0/0:17,0:16:48.16:0,48,1985	1/1:0,11:11:27.09:727,27,0	0/0:11,0:11:33.11:0,33,1319	0/0:12,0:12:33.11:0,33,1384	1/1:0,22:22:57.15:1457,57,0	1/1:0,22:22:57.20:1591,57,0	1/1:0,20:20:33.11:921,33,0	0/0:24,0:24:72.25:0,72,2864	1/1:2,10:10:30.09:780,30,0	1/1:0,13:13:33.05:855,33,0	1/1:0,10:10:14.97:291,15,0	1/1:0,8:8:21.03:522,21,0	1/1:0,15:15:36.08:940,36,0	1/1:0,7:7:12.04:307,12,0	0/0:10,0:10:27.09:0,27,1049	1/1:0,23:23:69.24:1892,69,0	1/1:0,23:23:60.21:1675,60,0	1/1:0,6:6:18.06:476,18,0
chr10	39280592	.	T	TCA	271.70	PASS	AB=1.000;AC=16;AF=0.571;AN=28;BaseQRankSum=0.658;DP=456;FS=2.017;HRun=0;HaplotypeScore=70.9154;InbreedingCoeff=0.4256;MQ=68.37;MQ0=25;MQRankSum=-0.044;QD=1.72;ReadPosRankSum=-1.272;VQSLOD=1.5365;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:6,0:6:3:0,3,31	./.	./.	./.	./.	./.	./.	0/0:10,0:10:2.84:0,3,31	0/1:14,0:13:0:0,0,0	./.	0/0:15,0:14:2.72:0,3,23	1/1:12,0:12:3.40:18,3,0	./.	./.	0/1:20,0:20:0:0,0,0	1/1:19,0:19:13.26:138,13,0	./.	1/1:13,0:11:6.01:65,6,0	./.	1/1:18,4:22:3:28,3,0	0/0:12,0:12:5.70:0,6,44	./.	1/1:26,0:24:3.01:42,3,0	0/0:11,0:11:2.84:0,3,14	1/1:20,0:19:1.72:4,2,0	1/1:11,0:11:6.02:79,6,0	./.
chr10	39281023	.	T	TA	8297.27	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-11.690;DP=554;FS=15.404;HRun=10;HaplotypeScore=68.9618;InbreedingCoeff=0.9441;MQ=73.68;MQ0=0;MQRankSum=1.527;QD=22.36;ReadPosRankSum=0.866;VQSLOD=4.2915;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,104,838	1/1:1,10:11:5.44:261,5,0	0/0:24,0:19:30.96:0,31,243	0/0:13,0:13:1.34:0,1,103	1/1:2,23:25:71.92:718,72,0	1/1:0,1:28:68.28:468,68,0	1/1:1,0:11:24.62:162,25,0	1/1:8,22:30:63.13:651,63,0	1/1:5,13:18:33.08:350,33,0	0/0:18,0:18:24.54:0,25,308	0/0:21,0:21:53.94:0,54,443	1/1:3,16:19:45.11:477,45,0	0/0:26,0:26:56.56:0,57,437	0/0:12,0:12:35.94:0,36,292	1/1:4,10:14:27.07:286,27,0	1/1:3,16:19:39.10:413,39,0	1/1:2,32:35:84.04:872,84,0	0/0:10,0:10:20.97:0,21,172	1/1:4,13:18:20.28:382,20,0	1/1:3,14:17:41.99:411,42,0	1/1:3,14:17:33.08:349,33,0	1/1:1,11:12:32.87:318,33,0	1/1:3,13:16:27.07:286,27,0	1/1:5,15:20:39.10:413,39,0	0/0:20,0:20:53.91:0,54,439	1/1:4,17:21:48.57:495,49,0	1/1:1,27:28:66.17:699,66,0	1/1:2,9:11:27.07:286,27,0
chr10	39281178	.	C	CAAA	2980.32	PASS	AB=1.000;AC=16;AF=0.286;AN=56;BaseQRankSum=-0.033;DP=569;FS=8.487;HRun=12;HaplotypeScore=96.3226;InbreedingCoeff=0.8424;MQ=71.26;MQ0=5;MQRankSum=-3.452;QD=15.28;ReadPosRankSum=-4.013;VQSLOD=0.9122;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,28:39:68.67:1062,69,0	0/0:6,0:6:18.05:0,18,202	0/1:28,0:17:5.58:6,0,200	0/1:15,0:9:6.96:7,0,25	0/0:20,0:22:48.96:0,49,536	0/0:4,0:28:67.56:0,68,406	0/0:2,0:18:41.17:0,41,247	0/0:26,0:27:61.46:0,61,687	0/0:16,0:17:29.85:0,30,320	1/1:3,12:21:48.06:732,48,0	1/1:4,5:15:21.05:328,21,0	0/0:14,0:17:32.84:0,33,322	1/1:7,10:18:21.07:367,21,0	1/1:6,1:16:21.07:337,21,0	0/0:13,0:14:34.56:0,35,399	0/0:18,0:19:39:0,39,421	0/0:27,0:28:64.57:0,65,737	1/1:7,7:16:22.25:306,22,0	0/0:21,0:22:50.96:0,51,554	0/0:15,0:15:32.98:0,33,359	0/0:16,0:17:45.05:0,45,488	0/0:12,0:12:20.86:0,21,226	0/0:19,0:20:37.47:0,37,435	0/0:24,0:26:69.10:0,69,756	1/1:3,0:26:9.60:33,10,0	0/0:31,0:33:70.80:0,71,725	0/0:21,0:21:57.10:0,57,639	0/0:11,0:12:31.42:0,31,341
chr10	39281729	.	ATGTGGTAAGGAGCTG	A	226.47	PASS	AC=2;AF=0.037;AN=54;BaseQRankSum=3.744;DP=879;FS=15.383;HRun=0;HaplotypeScore=358.0298;InbreedingCoeff=0.9079;MQ=74.75;MQ0=0;MQRankSum=-0.677;QD=32.35;ReadPosRankSum=0.023;VQSLOD=1.3562;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,147,8253	0/0:15,0:15:45.15:0,45,3194	0/0:34,0:31:37.90:0,38,3988	0/0:43,0:38:80.62:0,81,3681	0/0:32,0:32:90.31:0,90,5768	./.	1/1:5,2:7:7.13:308,7,0	0/0:52,0:52:99:0,141,8625	0/0:30,0:30:84.29:0,84,5072	0/0:30,0:30:87.30:0,87,5464	0/0:10,0:10:30.02:0,30,1728	0/0:33,0:33:90.27:0,90,4945	0/0:33,0:33:90.30:0,90,5495	0/0:29,0:29:84.22:0,84,4241	0/0:41,0:41:99:0,120,5896	0/0:30,0:30:84.29:0,84,5179	0/0:31,0:31:90.30:0,90,5871	0/0:28,0:28:81.28:0,81,5190	0/0:19,0:19:48.16:0,48,2644	0/0:29,0:29:81.28:0,81,4837	0/0:83,0:83:99:0,238,16073	0/0:35,0:35:99:0,105,6558	0/0:29,0:29:84.08:0,84,5379	0/0:36,0:36:89.93:0,90,5425	0/0:26,0:26:75.26:0,75,4807	0/0:41,0:41:99:0,111,6721	0/0:18,0:18:54.19:0,54,3311	0/0:19,0:19:57.20:0,57,3671
chr10	39281733	.	GGTAAGGAGC	G	200.80	PASS	AC=2;AF=0.037;AN=54;BaseQRankSum=3.345;DP=869;FS=15.010;HRun=0;HaplotypeScore=247.8588;InbreedingCoeff=0.9084;MQ=70.49;MQ0=0;MQRankSum=-1.600;QD=33.47;ReadPosRankSum=0.812;VQSLOD=1.5658;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,153,6620	0/0:15,0:15:45.15:0,45,2279	0/0:36,0:29:75.02:0,75,3477	0/0:40,0:34:90.58:0,91,3474	0/0:32,0:32:93.32:0,93,4338	./.	1/1:3,3:6:7.13:282,7,0	0/0:51,0:51:99:0,151,7085	0/0:30,0:30:90.31:0,90,4197	0/0:30,0:30:87.30:0,87,4112	0/0:12,0:12:36.04:0,36,1541	0/0:34,0:34:99:0,102,4519	0/0:31,0:31:93.31:0,93,4277	0/0:29,0:29:87.23:0,87,3412	0/0:42,0:42:99:0,123,5027	0/0:31,0:31:87.30:0,87,4102	0/0:31,0:31:93.31:0,93,4413	0/0:27,0:27:81.28:0,81,3994	0/0:18,0:18:54.18:0,54,2372	0/0:28,0:28:84.29:0,84,3892	0/0:83,0:83:99:0,247,12217	0/0:35,0:35:99:0,105,5102	0/0:29,0:29:86.97:0,87,4133	0/0:34,0:34:92.95:0,93,4364	0/0:25,0:25:75.26:0,75,3538	0/0:41,0:41:99:0,117,5438	0/0:18,0:18:54.19:0,54,2593	0/0:19,0:19:57.20:0,57,2736
chr10	39281875	.	TATATGA	T	78.08	PASS	AB=0.920;AC=5;AF=0.278;AN=18;BaseQRankSum=2.718;DP=248;FS=2.780;HRun=0;HaplotypeScore=20.7892;MQ=27.84;MQ0=81;MQRankSum=1.213;QD=1.66;ReadPosRankSum=1.547;VQSLOD=0.3233;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:48,0:2:6.02:0,6,107	0/0:36,0:5:8.81:0,9,259	./.	1/1:14,3:13:2.99:38,3,0	0/1:21,2:15:0.01:1,0,0	0/0:13,0:8:24.08:0,24,594	./.	0/0:3,0:2:6.02:0,6,138	./.	./.	./.	./.	./.	./.	1/1:5,2:2:6.02:123,6,0	./.	0/0:6,0:4:12.04:0,12,275	./.	./.	./.	./.	./.	./.	0/0:9,0:3:9.03:0,9,136	./.	./.
chr10	39281893	.	TGTGA	T	84.14	PASS	AB=0.800;AC=3;AF=0.058;AN=52;BaseQRankSum=3.278;DP=296;FS=1.963;HRun=0;HaplotypeScore=28.4044;InbreedingCoeff=0.3135;MQ=37.41;MQ0=82;MQRankSum=-1.358;QD=1.79;ReadPosRankSum=-0.408;VQSLOD=1.1298;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:3:6.02:0,6,128	./.	./.	0/0:43,0:5:5.80:0,6,143	0/0:3,0:2:6.01:0,6,89	1/1:14,13:23:10.72:167,11,0	0/1:15,5:14:0.15:0,0,0	0/0:12,0:7:21.05:0,21,400	0/0:7,0:6:15.05:0,15,276	0/0:10,0:7:18.06:0,18,473	0/0:7,0:4:12.04:0,12,208	0/0:5,0:3:9.03:0,9,163	0/0:5,0:3:9.03:0,9,194	0/0:10,0:7:15.05:0,15,314	0/0:2,0:1:3.01:0,3,64	0/0:4,0:2:3.01:0,3,64	0/0:11,0:6:9.01:0,9,156	0/0:6,0:3:9.01:0,9,113	0/0:12,0:6:15.04:0,15,333	0/0:6,0:5:9.03:0,9,194	0/0:16,0:12:12.04:0,12,256	0/0:2,0:1:3.01:0,3,64	0/0:3,0:2:6.02:0,6,127	0/0:14,0:11:15.03:0,15,352	0/0:7,0:3:9.02:0,9,127	0/0:9,0:3:6.02:0,6,135	0/0:4,0:3:9.03:0,9,226	0/0:2,0:1:3.01:0,3,80
chr10	39281971	.	A	AGTGTGTGTGTGTGT	8215.24	PASS	AC=48;AF=0.923;AN=52;BaseQRankSum=-3.311;DP=846;FS=4.984;HRun=0;HaplotypeScore=230.9166;InbreedingCoeff=0.5727;MQ=42.25;MQ0=61;MQRankSum=-2.953;QD=11.80;ReadPosRankSum=-3.031;VQSLOD=3.0958;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:31:6.14:127,6,0	1/1:1,0:1:0.89:2,1,0	1/1:55,0:7:0.89:2,1,0	./.	1/1:24,0:24:20.58:500,21,0	0/0:25,0:26:2.38:0,2,68	1/1:27,0:39:1.36:3,1,0	1/1:29,0:27:30.05:436,30,0	1/1:35,0:33:14.71:337,15,0	1/1:34,0:34:48.14:1020,48,0	./.	1/1:36,0:33:30.10:789,30,0	1/1:9,17:30:6.91:298,7,0	1/1:14,14:37:0.83:1,1,0	1/1:33,0:30:12.51:292,13,0	1/1:34,0:33:18.52:349,19,0	1/1:27,0:25:12.98:274,13,0	1/1:16,0:13:14.05:231,14,0	1/1:19,0:17:25.22:370,25,0	1/1:22,0:20:3.01:38,3,0	1/1:44,0:36:9.03:178,9,0	1/1:15,0:15:6.48:99,6,0	1/1:17,0:17:12.21:279,12,0	1/1:42,0:39:18.76:481,19,0	0/0:6,0:22:54.19:0,54,1622	1/1:15,0:30:48.22:1099,48,0	1/1:23,0:21:31.31:694,31,0	1/1:11,0:10:18.53:315,19,0
chr10	39282124	.	C	CA	1950.22	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-6.259;DP=788;FS=1.161;HRun=2;HaplotypeScore=94.2712;InbreedingCoeff=0.9999;MQ=76.10;MQ0=0;MQRankSum=-2.398;QD=34.21;ReadPosRankSum=0.604;VQSLOD=3.6529;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:36:99:0,105,1289	0/0:16,0:16:48.14:0,48,579	0/0:18,0:18:45.09:0,45,525	0/0:17,0:17:45.14:0,45,553	0/0:22,0:22:63.20:0,63,780	1/1:0,25:25:63.21:906,63,0	1/1:1,31:32:81.27:1166,81,0	0/0:41,0:41:99:0,117,1415	0/0:27,0:27:72.23:0,72,892	0/0:43,0:43:99:0,115,1413	0/0:13,0:13:36.11:0,36,446	0/0:27,0:25:72.23:0,72,891	0/0:29,0:28:78.23:0,78,952	0/0:28,0:28:75.20:0,75,894	0/0:22,0:21:63.17:0,63,755	0/0:27,0:27:72.21:0,72,874	0/0:36,0:36:99:0,108,1278	0/0:26,0:25:75.24:0,75,928	0/0:21,0:21:60.14:0,60,687	0/0:43,0:43:99:0,120,1485	0/0:43,0:43:99:0,126,1546	0/0:27,0:27:78.25:0,78,966	0/0:27,0:27:81.24:0,81,991	0/0:38,0:38:93.09:0,93,1067	0/0:27,0:26:81.24:0,81,992	0/0:37,0:37:99:0,111,1365	0/0:18,0:18:45.13:0,45,545	0/0:21,0:21:63.20:0,63,780
chr10	39282660	.	ACAG	A	10897.47	PASS	AB=1.000;AC=35;AF=0.625;AN=56;BaseQRankSum=-1.505;DP=522;FS=2.362;HRun=0;HaplotypeScore=175.5082;InbreedingCoeff=0.9149;MQ=84.98;MQ0=1;MQRankSum=-5.590;QD=33.63;ReadPosRankSum=1.120;VQSLOD=4.8843;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:80.96:0,81,415	1/1:3,8:11:29.65:335,30,0	0/0:27,0:27:81.27:0,81,1782	0/0:22,0:21:47.69:0,48,1037	1/1:2,12:14:38.24:433,38,0	0/0:13,0:13:35.44:0,35,160	0/0:18,0:18:43.41:0,43,177	1/1:5,12:17:50.53:573,51,0	1/1:2,21:22:63.17:887,63,0	0/1:19,0:19:25.69:26,0,94	0/0:13,0:13:35.19:0,35,153	1/1:2,18:20:59.32:769,59,0	0/0:12,0:12:22.64:0,23,125	0/0:18,0:18:46.13:0,46,208	1/1:2,14:16:45.11:604,45,0	1/1:0,17:17:51.13:701,51,0	1/1:4,25:29:80.88:1059,81,0	0/0:17,0:17:36.30:0,36,172	1/1:3,9:12:35.33:447,35,0	1/1:2,11:13:36.08:447,36,0	1/1:3,32:35:99:1302,102,0	1/1:2,15:17:48.06:642,48,0	1/1:2,8:10:26.80:278,27,0	1/1:6,27:32:78.07:1081,78,0	0/0:18,0:18:48.08:0,48,1076	1/1:2,15:17:48.15:691,48,0	1/1:6,12:18:44.24:529,44,0	1/1:0,3:3:9.02:96,9,0
chr10	39282661	.	C	CT	17204.09	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=9.226;DP=512;FS=22.898;HRun=0;HaplotypeScore=132.8232;InbreedingCoeff=0.9788;MQ=84.26;MQ0=1;MQRankSum=-10.139;QD=38.49;ReadPosRankSum=5.219;VQSLOD=2.8261;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,39:39:99:1649,111,0	1/1:8,2:10:30.08:367,30,0	0/0:27,0:27:81.24:0,81,1109	0/0:20,0:19:48.12:0,48,641	1/1:12,2:14:39.10:477,39,0	1/1:0,13:13:39.13:587,39,0	1/1:0,19:19:51.17:769,51,0	1/1:13,4:17:51.15:634,51,0	1/1:22,0:21:63.18:797,63,0	1/1:0,19:19:57.18:835,57,0	1/1:0,13:13:39.13:584,39,0	1/1:18,2:20:60.14:757,60,0	1/1:0,12:12:36.12:540,36,0	1/1:0,18:18:48.16:713,48,0	1/1:14,1:15:45.14:574,45,0	1/1:17,0:17:51.15:654,51,0	1/1:26,2:28:81.24:1022,81,0	1/1:0,17:17:51.17:768,51,0	1/1:10,2:12:36.11:462,36,0	1/1:13,0:13:36.03:408,36,0	1/1:34,1:35:99:1308,102,0	1/1:17,0:17:49.38:592,49,0	1/1:9,0:9:27:294,27,0	1/1:28,5:32:90.26:1148,90,0	0/0:18,0:18:48.16:0,48,667	1/1:16,0:16:48.15:604,48,0	1/1:14,2:16:45.13:568,45,0	1/1:3,0:3:9.02:93,9,0
chr10	39282665	.	T	TTG	13812.73	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-4.179;DP=534;FS=2.773;HRun=0;HaplotypeScore=163.5110;InbreedingCoeff=0.9905;MQ=84.62;MQ0=1;MQRankSum=-7.264;QD=44.27;ReadPosRankSum=0.610;VQSLOD=5.3484;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:83.51:0,84,1305	1/1:3,8:11:30.03:414,30,0	0/0:29,0:29:84.27:0,84,1315	0/0:21,0:20:50.87:0,51,737	1/1:2,12:14:38.66:537,39,0	0/0:14,0:14:42.13:0,42,504	0/0:18,0:18:50.17:0,50,553	1/1:10,12:22:66.19:992,66,0	1/1:0,21:20:60.20:1023,60,0	0/0:18,0:18:34.37:0,34,521	0/0:14,0:14:39.12:0,39,470	1/1:5,18:23:65.82:1008,66,0	0/0:12,0:12:23.35:0,23,384	0/0:19,0:19:54.15:0,54,639	1/1:2,14:16:48.14:748,48,0	1/1:1,17:18:54.18:893,54,0	1/1:6,25:31:84.19:1298,84,0	0/0:18,0:18:36.65:0,37,566	1/1:7,9:16:47.98:721,48,0	1/1:2,11:13:37.01:563,37,0	1/1:5,32:37:99:1637,105,0	1/1:1,15:16:48.16:821,48,0	1/1:0,8:8:20.66:277,21,0	1/1:4,27:30:48.28:1235,48,0	0/0:20,0:20:51.17:0,51,825	1/1:2,15:17:48.16:837,48,0	1/1:3,12:15:45.14:687,45,0	1/1:0,3:3:9.03:120,9,0
chr10	39282733	.	C	CT	4459.76	PASS	AB=0.707;AC=45;AF=0.804;AN=56;BaseQRankSum=-4.152;DP=576;FS=12.670;HRun=15;HaplotypeScore=109.2625;InbreedingCoeff=-0.0566;MQ=73.94;MQ0=3;MQRankSum=1.151;QD=8.21;ReadPosRankSum=-1.037;VQSLOD=2.2423;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:17,11:29:3.71:362,4,0	0/1:6,5:11:3.03:79,0,3	0/0:33,0:20:5.44:0,5,75	0/1:29,0:19:4.37:4,0,43	1/1:7,10:18:6.61:137,7,0	1/1:18,6:24:4.55:217,5,0	0/1:10,8:18:0.11:207,0,0	1/1:14,12:26:17.37:229,17,0	1/1:6,11:17:8.90:174,9,0	1/1:17,6:23:8.88:179,9,0	1/1:9,3:12:14.88:115,15,0	1/1:7,8:16:11.95:94,12,0	1/1:14,7:21:15.25:207,15,0	1/1:9,7:17:26.75:200,27,0	1/1:9,17:28:25.89:333,26,0	0/1:7,13:19:18.10:169,0,18	1/1:8,14:23:5.76:252,6,0	0/1:9,5:14:0.29:95,0,0	1/1:10,5:21:14.28:188,14,0	1/1:10,8:18:8.81:134,9,0	1/1:10,12:23:2.11:148,2,0	0/1:10,6:18:23.71:143,0,24	0/1:9,10:19:31.64:78,0,32	1/1:12,5:18:2.71:114,3,0	1/1:9,14:23:1.44:110,1,0	1/1:7,13:20:30.58:249,31,0	0/1:12,12:25:31.98:179,0,32	0/1:4,7:11:6.03:64,0,6
chr10	39283258	.	ATTT	A	1138.71	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.968;DP=608;FS=0.615;HRun=15;HaplotypeScore=90.6208;InbreedingCoeff=0.9832;MQ=71.77;MQ0=1;MQRankSum=0.804;QD=24.23;ReadPosRankSum=2.874;VQSLOD=3.1115;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:79.51:0,80,1434	0/0:6,0:6:14.98:0,15,208	0/0:17,0:14:23.37:0,23,283	0/0:11,0:12:16.82:0,17,159	0/0:23,0:25:61.02:0,61,959	1/1:1,21:22:54.15:605,54,0	1/1:3,21:25:60.03:656,60,0	0/0:27,0:28:63.22:0,63,1143	0/0:20,0:20:51.14:0,51,847	0/0:26,0:26:57.14:0,57,969	0/0:23,0:25:57.18:0,57,990	0/0:29,0:29:60.19:0,60,1036	0/0:20,0:20:42.14:0,42,712	0/0:14,0:14:30.10:0,30,529	0/0:23,0:25:60.20:0,60,1047	0/0:31,0:31:78.24:0,78,1293	0/0:19,0:19:45.15:0,45,800	0/0:21,0:21:48.14:0,48,835	0/0:23,0:25:60.18:0,60,1000	0/0:16,0:17:37.34:0,37,590	0/0:11,0:17:36.04:0,36,519	0/0:20,0:21:48.14:0,48,822	0/0:13,0:14:27.07:0,27,428	0/0:27,0:30:75.22:0,75,1257	0/0:3,0:21:53.82:0,54,443	0/0:23,0:27:58.36:0,58,895	0/0:29,0:32:78.25:0,78,1340	0/0:7,0:8:24.04:0,24,377
chr10	39283754	.	AGCC	A	2043.82	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.987;DP=693;FS=9.552;HRun=0;HaplotypeScore=97.6928;InbreedingCoeff=0.9817;MQ=76.06;MQ0=0;MQRankSum=-2.626;QD=40.07;ReadPosRankSum=1.868;VQSLOD=4.8646;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:39:99:0,117,2567	0/0:8,0:8:24.08:0,24,562	0/0:10,0:10:22.19:0,22,447	0/0:18,0:18:40.69:0,41,799	0/0:15,0:15:45.11:0,45,992	0/0:27,0:27:81.19:0,81,1818	0/0:27,0:27:81.24:0,81,1852	0/0:25,0:25:74.67:0,75,1543	0/0:31,0:31:93.32:0,93,2132	0/0:20,0:20:60.15:0,60,1222	0/0:14,0:14:39.13:0,39,870	0/0:38,0:38:99:0,111,2528	1/1:0,29:29:66.23:1162,66,0	1/1:0,22:22:57.20:1003,57,0	0/0:26,0:26:78.27:0,78,1843	0/0:28,0:28:84.27:0,84,1934	0/0:35,0:35:99:0,105,2465	0/0:28,0:28:84.29:0,84,1984	0/0:17,0:17:48.13:0,48,998	0/0:15,0:15:45.15:0,45,1059	0/0:61,0:61:99:0,177,3849	0/0:21,0:21:63.17:0,63,1354	0/0:16,0:16:48.11:0,48,1008	0/0:37,0:37:99:0,111,2593	0/0:19,0:19:57.20:0,57,1347	0/0:36,0:36:99:0,105,2163	0/0:26,0:26:78.25:0,78,1764	0/0:4,0:4:12.04:0,12,283
chr10	39284361	.	CAAGGCACCTGCTTCCCTCT	C	2549.71	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.921;DP=549;FS=10.641;HRun=0;HaplotypeScore=266.2566;InbreedingCoeff=0.9896;MQ=76.29;MQ0=0;MQRankSum=-6.914;QD=101.99;ReadPosRankSum=2.193;VQSLOD=1.9223;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,114,9279	0/0:11,0:11:33.11:0,33,2740	0/0:20,0:20:39.13:0,39,2688	0/0:9,0:9:27.09:0,27,1406	0/0:17,0:17:45.15:0,45,3548	1/1:3,13:16:36.12:1883,36,0	1/1:4,5:9:15.05:785,15,0	0/0:21,0:21:54.18:0,54,3382	0/0:17,0:17:45.15:0,45,3802	0/0:17,0:17:36.12:0,36,2625	0/0:16,0:16:42.14:0,42,3324	0/0:22,0:22:66.23:0,66,5426	0/0:14,0:14:39.13:0,39,3082	0/0:14,0:14:39.13:0,39,3005	0/0:17,0:17:42.14:0,42,3449	0/0:14,0:14:33.11:0,33,2963	0/0:37,0:37:90.31:0,90,7012	0/0:34,0:34:81.28:0,81,6613	0/0:28,0:28:54.18:0,54,3349	0/0:18,0:18:42.14:0,42,3492	0/0:34,0:34:84.29:0,84,5314	0/0:16,0:16:48.16:0,48,4192	0/0:16,0:16:42.13:0,42,3503	0/0:28,0:28:69.24:0,69,5782	0/0:14,0:14:39.13:0,39,2850	0/0:25,0:25:66.23:0,66,5171	0/0:15,0:15:45.15:0,45,3757	0/0:8,0:8:24.08:0,24,1743
chr10	39284751	.	A	AG	4206.44	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-11.843;DP=748;FS=3.409;HRun=4;HaplotypeScore=70.2671;InbreedingCoeff=0.9913;MQ=89.83;MQ0=0;MQRankSum=-2.518;QD=36.26;ReadPosRankSum=3.111;VQSLOD=4.0239;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,48:52:99:1805,132,0	0/0:11,0:11:30.09:0,30,340	0/0:21,0:21:54.15:0,54,607	0/0:39,0:39:92.78:0,93,987	0/0:18,0:18:45.13:0,45,510	0/0:19,0:19:54.13:0,54,612	0/0:29,0:29:75.17:0,75,827	0/0:36,0:36:99:0,99,1094	0/0:31,0:31:84.24:0,84,953	1/1:2,27:29:78.24:1047,78,0	1/1:0,13:13:36.12:493,36,0	0/0:33,0:33:87.25:0,87,986	0/0:22,0:22:63.18:0,63,712	0/0:19,0:19:57.16:0,57,640	0/0:30,0:30:84.24:0,84,953	0/0:23,0:23:63.16:0,63,704	0/0:35,0:35:90.25:0,90,1020	1/1:0,22:22:63.21:862,63,0	0/0:27,0:27:78.22:0,78,885	0/0:14,0:14:39.11:0,39,442	0/0:61,0:61:99:0,168,1885	0/0:18,0:18:54.13:0,54,596	0/0:32,0:32:90.22:0,90,1000	0/0:34,0:34:99:0,102,1157	0/0:17,0:17:48.14:0,48,545	0/0:33,1:34:58.22:0,58,1039	0/0:25,0:24:72.21:0,72,816	0/0:4,0:4:12.03:0,12,136
chr10	39285467	.	TTTTG	T	1165.15	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=10.452;DP=579;FS=0.469;HRun=0;HaplotypeScore=109.5378;InbreedingCoeff=0.9228;MQ=67.43;MQ0=4;MQRankSum=2.685;QD=12.53;ReadPosRankSum=0.960;VQSLOD=2.9993;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:42,1:43:80.95:580,81,0	0/0:11,0:11:30.10:0,30,700	0/0:23,0:12:11.19:0,11,522	0/0:22,0:16:17.02:0,17,299	0/0:28,0:28:75.20:0,75,1593	0/0:13,0:12:39.10:0,39,827	0/0:17,0:17:45.10:0,45,931	0/0:28,0:27:1.17:0,1,761	0/0:18,0:18:51.13:0,51,1090	1/1:17,0:17:40.78:254,41,0	1/1:12,2:14:26.52:207,27,0	0/0:19,0:19:57.16:0,57,1249	0/0:16,0:16:48.15:0,48,1089	0/0:20,0:20:60.14:0,60,1233	0/0:18,0:18:53.14:0,53,1003	0/0:17,0:16:45.13:0,45,964	0/0:29,0:29:87.22:0,87,1868	1/1:18,1:19:35.74:283,36,0	0/0:25,0:25:37.88:0,38,1018	0/0:23,0:23:39.68:0,40,901	0/0:14,0:14:30.10:0,30,547	0/0:23,0:23:69.08:0,69,1340	0/0:19,0:19:54.13:0,54,1060	0/0:11,0:11:33.09:0,33,705	0/0:32,0:32:89.17:0,89,1571	0/0:22,0:22:35.94:0,36,939	0/0:27,0:27:68.43:0,68,1079	0/0:11,0:11:15.04:0,15,266
chr10	39285468	.	TTTG	T	3057.56	PASS	AB=1.000;AC=12;AF=0.214;AN=56;BaseQRankSum=3.343;DP=573;FS=0.926;HRun=0;HaplotypeScore=90.5471;InbreedingCoeff=0.5734;MQ=67.18;MQ0=4;MQRankSum=0.346;QD=16.09;ReadPosRankSum=0.281;VQSLOD=3.3699;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,39:42:84.20:1362,84,0	0/0:10,0:10:30.09:0,30,574	0/0:23,0:12:30.77:0,31,482	0/0:20,0:14:17.49:0,17,252	0/0:28,0:28:75.18:0,75,1333	0/0:13,0:12:39.10:0,39,679	0/0:17,0:17:45.11:0,45,801	0/1:27,0:26:99:119,0,497	0/0:18,0:18:54.15:0,54,950	1/1:2,15:17:49.14:644,49,0	1/1:3,11:14:27.05:394,27,0	0/0:19,0:19:57.17:0,57,1066	0/0:16,0:16:48.16:0,48,920	0/0:20,0:20:60.16:0,60,1065	0/0:18,0:18:53.81:0,54,871	0/0:17,0:16:45.11:0,45,799	0/0:29,0:29:87.24:0,87,1596	1/1:2,17:19:36.12:595,36,0	0/1:26,0:26:82.31:82,0,691	0/1:23,0:23:10.85:11,0,571	0/0:14,0:14:16.50:0,16,362	0/0:24,0:24:72.08:0,72,1170	0/0:19,0:19:54.12:0,54,888	0/0:11,0:11:33.09:0,33,600	0/0:31,0:31:89.94:0,90,1386	0/1:22,0:22:24.56:25,0,685	0/0:27,0:27:33.03:0,33,694	0/0:9,0:9:11.70:0,12,173
chr10	39285471	.	G	GTT	4056.58	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=-9.488;DP=571;FS=1.844;HRun=10;HaplotypeScore=78.6444;InbreedingCoeff=0.7370;MQ=65.53;MQ0=4;MQRankSum=0.745;QD=18.78;ReadPosRankSum=-4.426;VQSLOD=1.7942;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:41,0:41:39.44:39,0,107	0/0:12,0:12:30.01:0,30,296	0/0:22,0:11:24.39:0,24,228	0/0:18,0:12:12.62:0,13,103	0/0:26,0:27:59.38:0,59,569	0/0:13,0:12:27.01:0,27,266	0/0:14,0:14:36.04:0,36,359	1/1:5,17:21:51.12:682,51,0	0/0:18,0:18:48.09:0,48,488	0/1:17,0:17:32.02:32,0,37	0/1:13,0:13:18.52:97,0,19	0/0:19,0:20:44.75:0,45,491	0/0:18,0:18:51.07:0,51,504	0/0:21,0:21:57:0,57,557	0/0:20,0:21:26.61:0,27,429	0/0:17,0:16:39.05:0,39,388	0/0:30,0:30:78.11:0,78,783	0/0:18,0:18:25.35:0,25,83	1/1:8,15:23:45.03:554,45,0	1/1:2,21:25:54.04:697,54,0	1/1:1,14:15:30.10:447,30,0	0/0:27,0:27:50.23:0,50,628	0/0:16,0:19:35.52:0,36,393	0/0:11,0:11:24.02:0,24,244	0/0:28,0:29:65.82:0,66,646	1/1:5,16:22:48.12:633,48,0	1/1:5,18:28:27.15:712,27,0	1/1:1,6:10:12.03:163,12,0
chr10	39285816	.	C	CGT	910.34	PASS	AB=0.866;AC=18;AF=0.346;AN=52;BaseQRankSum=-4.961;DP=685;FS=5.557;HRun=0;HaplotypeScore=115.8998;InbreedingCoeff=0.2749;MQ=63.71;MQ0=10;MQRankSum=1.740;QD=3.09;ReadPosRankSum=-3.735;VQSLOD=1.1203;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:44:8.14:0,8,41	1/1:4,3:8:6.01:70,6,0	./.	./.	1/1:14,0:14:5.99:48,6,0	1/1:14,5:20:9.02:113,9,0	1/1:29,9:40:9.01:99,9,0	0/0:20,0:20:1.24:0,1,3	1/1:25,0:25:12:117,12,0	0/0:20,0:22:2.52:0,3,13	0/0:6,0:11:11.36:0,11,56	0/1:26,3:31:32.33:32,0,67	0/0:16,0:24:19.56:0,20,97	0/0:17,0:26:19.72:0,20,94	0/1:22,3:27:69.79:97,0,70	0/1:27,5:34:73.46:73,0,82	1/1:19,9:28:15.05:221,15,0	0/0:14,0:19:11.19:0,11,56	0/0:23,0:23:3.93:0,4,21	0/0:15,0:18:5.59:0,6,28	0/0:53,0:64:20.04:0,20,108	0/1:22,0:22:52.55:56,0,53	0/1:7,2:9:26.22:38,0,26	0/1:28,6:35:99:112,0,108	0/0:15,0:14:12.03:0,12,129	0/0:18,0:19:2.73:0,3,14	0/0:15,0:18:8.42:0,8,53	0/0:0,0:4:5.68:0,6,28
chr10	39286391	.	GT	G	5323.92	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=13.075;DP=586;FS=1.059;HRun=8;HaplotypeScore=70.6790;InbreedingCoeff=0.9986;MQ=77.14;MQ0=1;MQRankSum=-0.994;QD=23.45;ReadPosRankSum=-0.453;VQSLOD=5.2527;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,27:30:72.10:695,72,0	0/0:12,0:12:36.10:0,36,425	0/0:24,0:25:50.44:0,50,531	0/0:25,0:23:29.53:0,30,348	0/0:25,1:26:40.25:0,40,737	0/0:22,1:23:37.22:0,37,721	0/0:18,0:18:45.14:0,45,544	1/1:0,24:24:72.07:678,72,0	0/0:22,0:22:63.18:0,63,748	1/1:3,12:15:36.05:343,36,0	1/1:1,16:17:45.01:423,45,0	0/0:24,0:24:63.18:0,63,750	0/0:7,0:7:18.03:0,18,204	0/0:19,0:19:54.12:0,54,614	0/0:21,0:21:63.19:0,63,761	0/0:28,0:28:84.23:0,84,983	0/0:28,0:28:78.21:0,78,917	1/1:0,17:17:33.05:319,33,0	1/1:3,15:18:45.02:418,45,0	1/1:0,19:19:50.92:463,51,0	1/1:2,22:24:60.10:579,60,0	0/0:25,0:25:69.19:0,69,813	0/0:15,0:15:45.11:0,45,520	0/0:29,0:29:81.25:0,81,978	0/0:12,0:12:36.10:0,36,423	1/1:3,26:29:77.83:712,78,0	1/1:0,14:14:39.06:376,39,0	1/1:1,19:20:33.05:319,33,0
chr10	39286965	.	ATAGGATACACCAGGAACATGCCTTCCCCCAACCTCTGC	A	2261.59	PASS	AB=0.955;AC=7;AF=0.130;AN=54;BaseQRankSum=5.151;DP=592;FS=1.301;HRun=0;HaplotypeScore=543.8318;InbreedingCoeff=0.7364;MQ=90.54;MQ0=0;MQRankSum=-5.033;QD=70.67;ReadPosRankSum=2.955;VQSLOD=0.3007;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:0,4:4:9.03:652,9,0	0/0:9,0:9:27.09:0,27,3393	0/0:26,0:26:78.21:0,78,4986	0/0:20,0:20:60.17:0,60,4517	0/0:13,0:13:36.12:0,36,4934	0/0:12,0:12:36.12:0,36,5240	0/0:25,0:25:75.24:0,75,8067	0/0:19,0:19:57.20:0,57,4988	0/0:31,0:31:93.32:0,93,12636	1/1:0,1:1:3.01:300,3,0	./.	0/0:51,0:51:99:0,154,18869	0/0:11,0:11:33.11:0,33,3985	0/0:32,0:32:96.30:0,96,13308	0/0:35,0:35:99:0,105,15260	0/0:33,0:33:99:0,99,13563	0/0:32,0:32:96.26:0,96,12035	1/1:0,6:6:12.04:1201,12,0	0/0:26,0:26:78.24:0,78,5924	0/0:13,0:13:36.11:0,36,3739	0/0:55,0:55:99:0,163,23555	0/0:16,0:16:45.14:0,45,4830	0/0:12,0:12:33.11:0,33,3484	0/0:31,0:31:93.31:0,93,11375	0/0:20,0:20:60.21:0,60,7811	0/1:20,1:21:99:237,0,7767	0/0:22,0:21:66.23:0,66,8612	0/0:16,0:16:48.15:0,48,6476
chr10	39288106	.	GGT	G	1741.18	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=0.147;DP=479;FS=0.482;HRun=0;HaplotypeScore=57.5067;InbreedingCoeff=0.6821;MQ=51.79;MQ0=38;MQRankSum=-1.026;QD=9.46;ReadPosRankSum=0.606;VQSLOD=3.1394;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:27:41.84:307,42,0	0/0:5,0:4:12.02:0,12,163	0/0:57,0:7:1.17:0,1,62	0/0:53,0:13:17.18:0,17,169	0/0:13,0:12:23.96:0,24,259	0/0:12,0:11:24.57:0,25,327	0/0:22,0:22:51.10:0,51,567	1/1:19,0:18:42.19:313,42,0	0/0:14,0:12:30.97:0,31,294	1/1:11,0:9:16.85:135,17,0	1/1:5,0:3:5.88:36,6,0	0/0:11,0:9:23.98:0,24,261	0/1:15,0:13:26.02:71,0,26	0/0:11,0:9:2:0,2,21	0/0:15,0:15:38.08:0,38,426	0/0:18,0:18:47.74:0,48,513	0/0:35,0:33:78.38:0,78,920	1/1:18,0:14:31.30:211,31,0	1/1:13,0:12:29.91:267,30,0	1/1:9,1:7:16.85:117,17,0	1/1:10,0:10:19.20:156,19,0	0/0:7,0:6:12:0,12,132	0/0:4,0:3:5.99:0,6,63	0/0:18,0:18:45.01:0,45,510	0/1:11,0:10:8.37:8,0,16	1/1:3,12:15:28.30:201,28,0	1/1:5,0:12:11.02:69,11,0	0/1:10,0:6:21.57:57,0,22
chr10	39288115	.	T	TGGTTC	657.20	PASS	AB=0.894;AC=6;AF=0.107;AN=56;BaseQRankSum=5.441;DP=541;FS=2.734;HRun=0;HaplotypeScore=99.1985;InbreedingCoeff=0.0803;MQ=45.72;MQ0=65;MQRankSum=-4.251;QD=9.52;ReadPosRankSum=1.274;VQSLOD=2.6023;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,1:32:59.44:0,59,1042	0/0:5,0:4:12.04:0,12,265	0/0:55,0:5:14.75:0,15,172	0/0:52,0:12:20.38:0,20,297	0/0:17,0:15:36.09:0,36,647	0/0:19,0:17:48.15:0,48,947	0/0:18,0:17:44.18:0,44,796	0/0:24,0:21:63.19:0,63,1139	0/0:13,0:11:30.10:0,30,623	0/1:15,1:12:67.64:68,0,391	0/1:7,3:7:99:191,0,102	0/0:16,0:13:33.10:0,33,652	0/1:16,2:16:99:298,0,110	0/1:13,0:10:15.88:16,0,175	0/0:17,0:14:36.12:0,36,748	0/0:16,0:16:42.14:0,42,893	0/0:40,0:35:90.29:0,90,1804	0/0:20,0:15:11.39:0,11,427	0/0:19,0:15:42.10:0,42,686	0/0:11,0:7:21.07:0,21,453	0/0:13,0:11:27.09:0,27,518	0/0:7,0:6:12.04:0,12,241	0/0:6,0:3:6.01:0,6,92	0/0:21,0:18:39.13:0,39,791	1/1:10,0:10:0.55:202,1,0	0/0:17,0:16:37.67:0,38,712	0/0:16,0:15:27.46:0,27,392	0/0:13,0:8:17.99:0,18,309
chr10	39288118	.	T	TGGTTC	838.23	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=4.140;DP=548;FS=1.666;HRun=0;HaplotypeScore=98.6833;InbreedingCoeff=0.2837;MQ=45.47;MQ0=66;MQRankSum=-5.623;QD=15.52;ReadPosRankSum=5.336;VQSLOD=3.0454;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:32:74.47:0,74,1101	0/0:5,0:4:12.04:0,12,243	0/0:54,0:5:11.70:0,12,154	0/0:52,0:12:22.02:0,22,293	0/0:17,0:15:36.11:0,36,695	0/0:21,0:19:54.14:0,54,1016	0/0:18,0:17:45.11:0,45,801	0/0:25,0:22:63.15:0,63,1105	0/0:13,0:11:30.09:0,30,584	0/0:16,0:12:15.35:0,15,391	0/1:10,0:7:88.45:88,0,101	0/0:16,0:13:33.10:0,33,659	0/1:19,0:16:99:134,0,104	0/1:13,0:10:99:129,0,100	0/0:18,0:15:39.13:0,39,746	0/0:18,0:17:42.14:0,42,869	0/0:40,0:35:90.29:0,90,1748	0/0:18,0:13:33.10:0,33,509	0/0:17,0:13:36.12:0,36,727	0/0:11,0:7:21.07:0,21,446	0/0:14,0:12:27.09:0,27,506	0/0:6,0:5:9.02:0,9,160	0/0:5,0:2:3.01:0,3,65	0/0:21,0:18:35.65:0,36,701	1/1:6,5:11:27.09:610,27,0	0/0:18,0:17:37.66:0,38,680	0/0:17,0:16:30.56:0,31,502	0/0:16,0:11:27.03:0,27,436
chr10	39288119	.	T	TGG	334.54	PASS	AB=0.805;AC=3;AF=0.054;AN=56;BaseQRankSum=3.642;DP=547;FS=0.000;HRun=0;HaplotypeScore=74.1646;InbreedingCoeff=0.0064;MQ=44.02;MQ0=67;MQRankSum=-4.674;QD=7.60;ReadPosRankSum=4.614;VQSLOD=2.9367;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:32:70.46:0,70,870	0/0:5,0:4:12.02:0,12,164	0/0:54,0:4:2.48:0,2,77	0/0:51,0:12:22.58:0,23,223	0/0:17,0:15:33.11:0,33,466	0/0:21,0:19:54.18:0,54,740	0/0:18,0:17:44.54:0,45,538	0/0:25,0:22:63.13:0,63,783	0/0:12,0:10:27.09:0,27,382	0/0:17,0:13:30.09:0,30,387	0/0:10,0:7:12.89:0,13,131	0/0:16,0:13:33.11:0,33,478	0/1:14,4:16:99:156,0,169	0/1:9,4:10:35.95:235,0,36	0/0:18,0:15:39.12:0,39,531	0/0:18,0:17:45.14:0,45,624	0/0:40,0:35:90.23:0,90,1196	0/0:18,0:13:33.10:0,33,453	0/0:17,0:13:36.11:0,36,482	0/0:12,0:7:21.07:0,21,302	0/0:14,0:12:27.09:0,27,367	0/0:5,0:4:6.02:0,6,93	0/0:5,0:2:3.01:0,3,44	0/0:21,0:18:35.64:0,36,463	0/1:10,0:11:6.91:42,0,7	0/0:18,0:17:35.33:0,35,473	0/0:17,0:16:30.07:0,30,367	0/0:16,0:11:27.09:0,27,385
chr10	39288130	.	T	TCC	1514.16	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-0.577;DP=392;FS=9.105;HRun=2;HaplotypeScore=60.3968;InbreedingCoeff=0.8749;MQ=43.83;MQ0=56;MQRankSum=-0.853;QD=17.40;ReadPosRankSum=0.427;VQSLOD=0.3462;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:16,1:14:33.10:437,33,0	0/0:4,0:3:6.02:0,6,73	0/0:20,0:1:2.80:0,3,13	0/0:20,0:7:8.07:0,8,59	0/0:15,0:13:15.03:0,15,178	0/0:15,0:14:33.10:0,33,405	0/0:20,0:19:26.25:0,26,257	0/0:16,0:13:33.06:0,33,381	0/0:14,0:13:33.09:0,33,411	1/1:3,9:9:18.04:221,18,0	1/1:4,7:9:18:206,18,0	0/0:17,0:15:33.10:0,33,418	1/1:12,2:13:12.90:320,13,0	1/1:6,1:5:8.62:96,9,0	0/0:15,0:12:18.04:0,18,211	0/0:12,0:11:15.05:0,15,195	0/0:30,0:25:36.06:0,36,407	1/1:14,0:9:24.08:327,24,0	0/0:16,0:13:24.02:0,24,285	0/0:9,0:6:12.01:0,12,127	0/0:11,0:9:12.04:0,12,147	0/0:6,0:5:12.04:0,12,157	0/0:9,0:6:11.98:0,12,118	0/0:18,0:14:15.04:0,15,189	1/1:3,0:6:9.02:94,9,0	0/0:10,0:9:21.06:0,21,257	0/0:13,0:12:27.08:0,27,325	0/0:14,0:8:18.06:0,18,232
chr10	39288685	.	A	AC	650.40	PASS	AB=0.824;AC=23;AF=0.426;AN=54;BaseQRankSum=-1.422;DP=346;FS=12.959;HRun=11;HaplotypeScore=52.4519;InbreedingCoeff=0.3508;MQ=75.78;MQ0=0;MQRankSum=-0.443;QD=4.04;ReadPosRankSum=-0.730;VQSLOD=-0.2389;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:9,0:10:2.04:6,2,0	./.	0/0:19,0:15:6.37:0,6,30	0/1:11,0:8:5.52:6,0,54	0/0:6,2:9:2.96:0,3,21	0/0:20,0:20:20.04:0,20,134	0/0:29,0:38:47.88:0,48,326	0/0:18,0:17:9.83:0,10,60	1/1:11,1:12:14.74:118,15,0	1/1:7,0:8:8.82:64,9,0	0/1:3,0:3:0:0,0,0	1/1:4,9:13:3.01:30,3,0	1/1:2,7:9:9.02:91,9,0	1/1:5,0:5:2.99:24,3,0	0/1:7,7:14:8.21:106,0,8	0/1:13,7:20:41.87:42,0,61	1/1:18,3:21:5.40:202,5,0	1/1:9,0:11:16.18:83,16,0	0/0:14,0:14:16.29:0,16,91	0/0:8,0:9:4.98:0,5,29	0/0:12,0:13:4.98:0,5,29	0/1:5,1:6:17.21:25,0,17	0/1:3,1:4:0:0,0,0	0/1:8,6:14:15.72:16,0,78	0/0:8,0:11:4.03:0,4,12	0/0:11,0:12:10.83:0,11,65	0/0:11,0:12:8.80:0,9,111	0/0:6,0:6:5.94:0,6,46
chr10	39288951	.	G	GC	9979.57	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=14.322;DP=728;FS=1.282;HRun=2;HaplotypeScore=106.9062;InbreedingCoeff=0.9989;MQ=77.02;MQ0=0;MQRankSum=-2.959;QD=37.52;ReadPosRankSum=-0.162;VQSLOD=4.6176;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,114,1359	0/0:8,0:8:21.07:0,21,260	0/0:11,0:11:27.06:0,27,319	0/0:19,0:19:43.40:0,43,433	0/0:20,0:20:60.19:0,60,742	0/0:24,0:24:72.21:0,72,869	0/0:33,0:33:99:0,99,1227	1/1:2,28:30:81.27:1165,81,0	0/0:31,0:31:87.22:0,87,1048	0/0:20,0:20:54.17:0,54,669	0/0:10,0:10:29.88:0,30,317	0/0:36,0:36:99:0,99,1226	1/1:2,20:22:51.17:730,51,0	1/1:0,24:24:63.21:906,63,0	0/0:32,0:32:96.29:0,96,1177	0/0:26,0:26:75.22:0,75,906	0/0:33,0:33:99:0,99,1210	0/0:36,0:36:99:0,99,1226	1/1:4,25:30:81.27:1156,81,0	1/1:0,19:19:48.16:690,48,0	1/1:3,69:72:99:2720,190,0	0/0:17,0:17:48.14:0,48,582	0/0:21,0:21:48.14:0,48,582	0/0:47,0:47:99:0,138,1709	1/1:2,20:22:60.20:863,60,0	1/1:2,22:24:66.20:929,66,0	1/1:0,13:13:30.10:432,30,0	1/1:0,10:10:27.09:389,27,0
chr10	39289381	.	TCC	T	5957.59	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=8.837;DP=520;FS=10.873;HRun=9;HaplotypeScore=71.1356;InbreedingCoeff=0.9191;MQ=87.89;MQ0=1;MQRankSum=-2.117;QD=26.72;ReadPosRankSum=2.542;VQSLOD=3.6725;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:21:34.17:0,34,326	0/0:3,0:3:9.03:0,9,148	0/0:23,1:23:44.38:0,44,565	0/0:20,0:20:36.88:0,37,460	0/0:20,0:20:50.60:0,51,831	0/0:21,0:21:63.18:0,63,956	0/0:23,0:23:63.17:0,63,981	1/1:11,23:34:69.07:765,69,0	0/0:24,0:24:66.18:0,66,1008	0/0:8,0:8:2.51:0,3,19	0/0:4,0:8:9.01:0,9,85	0/0:23,0:23:66.21:0,66,1055	1/1:1,15:16:42.12:488,42,0	1/1:4,20:24:54.15:629,54,0	0/0:20,0:20:54.18:0,54,883	0/0:20,0:20:54.17:0,54,852	0/0:17,0:17:45.15:0,45,735	0/0:0,0:5:3:0,3,29	1/1:2,27:29:75.19:852,75,0	1/1:0,22:22:60.16:695,60,0	1/1:3,13:16:36.09:420,36,0	0/0:8,0:8:17.73:0,18,255	0/0:8,0:8:18.04:0,18,295	0/0:21,0:21:48.16:0,48,777	1/1:4,6:10:9.02:105,9,0	1/1:6,21:27:62.89:734,63,0	1/1:2,31:33:83.98:955,84,0	1/1:1,10:11:27.08:315,27,0
chr10	39290164	.	TAC	T	5323.68	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=8.019;DP=872;FS=22.601;HRun=0;HaplotypeScore=159.2863;InbreedingCoeff=0.9800;MQ=54.76;MQ0=15;MQRankSum=0.823;QD=24.31;ReadPosRankSum=5.554;VQSLOD=3.6498;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,20:27:23.22:631,23,0	0/0:11,0:11:33.11:0,33,567	0/0:40,0:16:39.13:0,39,644	0/0:32,0:9:5.86:0,6,166	0/0:30,0:30:72.20:0,72,1208	0/0:21,0:21:54.17:0,54,907	0/0:26,0:26:63.19:0,63,1066	0/0:52,0:50:99:0,139,2186	0/0:33,0:33:99:0,99,1647	1/1:8,36:44:99:1421,111,0	1/1:3,21:24:42.12:559,42,0	0/0:30,0:30:78.25:0,78,1300	1/1:2,31:31:54.18:719,54,0	1/1:7,21:28:42.14:559,42,0	0/0:45,0:45:99:0,129,2190	0/0:23,0:23:66.20:0,66,1109	0/0:19,0:19:39.09:0,39,609	1/1:5,30:35:50.21:834,50,0	0/0:32,0:30:66.16:0,66,1034	0/0:23,0:23:66.21:0,66,1106	0/0:57,0:56:99:0,114,1904	0/0:23,0:23:66.16:0,66,1031	0/0:33,0:33:87.13:0,87,1494	0/0:34,0:33:68.93:0,69,1149	1/1:5,23:28:46.02:601,46,0	0/0:47,1:47:80.45:0,80,1932	0/0:29,0:29:72.11:0,72,1142	0/0:12,0:11:30.10:0,30,512
chr10	39290213	.	GTA	G	5155.03	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-6.489;DP=777;FS=0.739;HRun=0;HaplotypeScore=158.8286;InbreedingCoeff=0.9694;MQ=58.84;MQ0=15;MQRankSum=-0.421;QD=25.65;ReadPosRankSum=-0.166;VQSLOD=5.3013;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:20:33.11:0,33,544	0/0:12,0:12:30.09:0,30,486	0/0:38,1:8:6.60:0,7,83	0/0:60,0:20:7.72:0,8,183	0/0:24,0:24:69.22:0,69,1150	0/0:23,0:23:60.21:0,60,1022	0/0:18,0:18:42.14:0,42,720	1/1:21,20:40:96.24:1155,96,0	0/0:30,0:30:81.23:0,81,1307	0/0:39,0:39:99:0,107,1778	0/0:20,0:18:39.09:0,39,608	0/0:25,0:25:72.25:0,72,1234	0/0:28,0:27:63.13:0,63,1011	0/0:22,0:22:39.12:0,39,637	0/0:40,0:40:99:0,105,1795	0/0:27,0:27:72.23:0,72,1203	0/0:17,0:17:39.09:0,39,637	0/0:31,0:29:49.97:0,50,990	1/1:9,10:17:42.03:504,42,0	1/1:6,19:25:54.14:674,54,0	1/1:5,45:50:63.20:828,63,0	0/0:21,0:21:57.18:0,57,940	0/0:30,0:30:81.25:0,81,1334	0/0:24,0:23:51.17:0,51,868	0/0:22,0:22:42.13:0,42,694	1/1:8,26:34:38.79:1048,39,0	1/1:1,16:17:36.12:473,36,0	1/1:1,14:15:36.12:473,36,0
chr10	39290254	.	TAC	T	2303.17	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=3.640;DP=729;FS=1.556;HRun=0;HaplotypeScore=156.2676;InbreedingCoeff=0.9834;MQ=52.03;MQ0=13;MQRankSum=0.960;QD=22.58;ReadPosRankSum=1.328;VQSLOD=3.9404;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,13:21:23.64:301,24,0	0/0:11,0:11:30.10:0,30,499	0/0:38,1:15:39.12:0,39,617	0/0:41,1:17:18.34:0,18,426	0/0:28,0:26:72.23:0,72,1202	0/0:24,0:24:69.24:0,69,1186	0/0:23,0:23:54.16:0,54,919	0/0:34,0:33:69.05:0,69,1019	0/0:30,0:30:87.28:0,87,1466	1/1:9,27:36:99:1287,102,0	1/1:4,16:18:23.98:319,24,0	0/0:26,0:26:75.24:0,75,1254	0/0:31,0:31:84:0,84,1404	0/0:21,0:21:60.19:0,60,1010	0/0:38,0:37:87.30:0,87,1468	0/0:31,0:31:87.26:0,87,1394	0/0:22,0:22:55.68:0,56,905	1/1:9,14:20:47.13:556,47,0	0/0:20,0:17:33.23:0,33,351	0/0:24,0:24:14.78:0,15,253	0/0:29,0:28:18.06:0,18,298	0/0:16,0:16:45.15:0,45,747	0/0:30,0:30:87.28:0,87,1448	0/0:26,0:25:51.17:0,51,865	0/0:17,0:17:48.16:0,48,831	0/0:28,1:29:14.74:0,15,521	0/0:22,0:22:25.13:0,25,329	0/0:13,0:13:21.14:0,21,273
chr10	39290266	.	CATACACACATAT	C	5978.49	PASS	AB=0.592;AC=13;AF=0.232;AN=56;BaseQRankSum=9.015;DP=726;FS=12.007;HRun=0;HaplotypeScore=265.0498;InbreedingCoeff=0.8871;MQ=50.01;MQ0=17;MQRankSum=-10.341;QD=34.76;ReadPosRankSum=-3.425;VQSLOD=2.2734;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:23:21.54:0,22,1019	0/0:10,0:10:27.09:0,27,1351	0/0:36,0:13:33.10:0,33,1035	0/0:34,0:15:33.11:0,33,997	0/0:33,0:31:93.28:0,93,3473	0/0:25,0:25:75.24:0,75,3292	0/0:25,0:25:56.99:0,57,2239	1/1:29,3:34:39.99:1124,40,0	0/0:33,0:33:99:0,99,4101	0/0:34,0:34:99:0,102,3475	0/0:18,0:16:27.09:0,27,1056	0/0:24,0:24:72.19:0,72,3273	0/0:30,0:30:84.27:0,84,4069	0/0:23,0:23:66.15:0,66,2635	0/0:37,0:36:99:0,102,4203	0/0:32,0:32:93.30:0,93,4134	0/0:21,0:21:48.89:0,49,2504	0/0:23,0:20:59.77:0,60,1882	1/1:12,7:16:42.11:1263,42,0	1/1:9,15:27:13.44:202,13,0	1/1:20,2:23:12.87:143,13,0	0/0:17,0:17:48.13:0,48,1797	0/0:29,0:29:81.26:0,81,3709	0/0:25,0:24:48.15:0,48,2431	0/0:20,0:20:60.18:0,60,2523	0/1:9,16:29:65.55:1938,0,66	1/1:11,13:28:30.72:972,31,0	1/1:5,4:9:17.90:338,18,0
chr10	39290268	.	T	TAC	1309.39	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=10.888;DP=725;FS=8.986;HRun=0;HaplotypeScore=160.2029;InbreedingCoeff=0.8854;MQ=49.95;MQ0=17;MQRankSum=-10.021;QD=7.89;ReadPosRankSum=-2.704;VQSLOD=2.2251;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:23:19.23:0,19,347	0/0:9,0:9:27.09:0,27,359	0/0:34,0:11:27.08:0,27,343	0/0:33,0:15:30.04:0,30,369	0/0:33,0:31:87.22:0,87,1093	0/0:28,0:28:75.19:0,75,934	0/0:26,0:26:56.90:0,57,690	1/1:31,2:31:8.34:367,8,0	0/0:34,0:34:87.21:0,87,1090	0/0:35,0:35:84.25:0,84,1083	0/0:19,0:17:27.08:0,27,344	0/0:24,0:24:63.19:0,63,823	0/0:30,0:30:81.04:0,81,1030	0/0:23,0:23:54.18:0,54,717	0/0:37,0:36:99:0,99,1266	0/0:32,0:32:90.24:0,90,1136	0/0:22,0:22:48.63:0,49,636	0/0:23,0:20:37.07:0,37,672	1/1:16,3:16:7.45:275,7,0	1/1:25,1:25:8.31:84,8,0	1/1:19,1:23:2.67:23,3,0	0/0:16,0:16:42.11:0,42,528	0/0:28,0:28:78.24:0,78,1020	0/0:25,0:24:45.06:0,45,582	0/0:23,0:23:57.15:0,57,724	1/1:28,0:28:5.35:387,5,0	1/1:23,5:28:16.60:258,17,0	1/1:9,0:9:8.97:88,9,0
chr10	39290298	.	T	TAC	7492.04	PASS	AB=0.538;AC=21;AF=0.375;AN=56;BaseQRankSum=2.836;DP=792;FS=6.661;HRun=0;HaplotypeScore=141.4547;InbreedingCoeff=0.9180;MQ=55.79;MQ0=13;MQRankSum=-2.896;QD=24.09;ReadPosRankSum=-2.794;VQSLOD=4.7200;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,16:27:23.52:367,24,0	0/0:9,0:10:23.91:0,24,272	0/0:45,0:17:17.99:0,18,310	0/0:38,0:26:36.52:0,37,398	0/0:33,0:32:87.27:0,87,1067	0/0:27,0:28:72.04:0,72,850	0/0:28,0:28:54.17:0,54,664	1/1:21,25:45:41.77:1079,42,0	0/0:31,0:31:79.94:0,80,933	1/1:20,17:37:78.20:1233,78,0	1/1:8,8:17:15.40:258,15,0	0/0:20,0:20:51.14:0,51,614	0/0:28,0:28:68.69:0,69,809	0/0:24,0:24:60.19:0,60,737	0/0:33,0:32:87.27:0,87,1070	0/0:29,0:29:66.19:0,66,799	0/0:28,0:29:39.02:0,39,583	1/1:6,16:19:45.12:705,45,0	1/1:6,22:28:66.16:1015,66,0	1/1:4,27:30:17.38:293,17,0	1/1:11,13:23:17.44:288,17,0	0/0:15,0:16:38.95:0,39,456	0/0:26,0:28:71.86:0,72,815	0/0:30,0:29:57.13:0,57,700	0/0:31,0:31:81.25:0,81,996	1/1:9,29:38:47.37:1275,47,0	1/1:8,22:31:47.54:753,48,0	0/1:1,6:6:18.85:225,0,19
chr10	39290525	.	G	GA	2566.64	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=2.272;DP=575;FS=0.457;HRun=5;HaplotypeScore=66.7121;InbreedingCoeff=0.9499;MQ=82.52;MQ0=0;MQRankSum=-0.092;QD=28.20;ReadPosRankSum=-0.028;VQSLOD=3.5726;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,32:33:75.24:983,75,0	0/0:9,0:9:24.06:0,24,258	0/0:34,0:22:16.63:0,17,165	0/0:22,0:17:3.13:0,3,78	0/0:29,0:29:84.18:0,84,883	0/0:21,0:21:54.13:0,54,578	0/0:16,0:16:45.09:0,45,468	0/0:28,0:28:71.08:0,71,771	0/0:21,0:21:54:0,54,528	1/1:4,25:29:69.65:852,70,0	1/1:4,10:14:30.10:391,30,0	0/0:16,0:16:45.10:0,45,475	0/0:11,0:11:30.04:0,30,310	0/0:12,0:12:33.05:0,33,342	0/0:18,0:18:39.09:0,39,413	0/0:15,0:15:39.08:0,39,405	0/0:32,0:32:84.15:0,84,868	1/1:2,13:15:39.12:500,39,0	0/0:15,0:15:36.05:0,36,361	0/0:21,0:21:60.12:0,60,628	0/0:16,0:16:36.03:0,36,357	0/0:18,0:17:39.08:0,39,407	0/0:24,0:25:63.05:0,63,620	0/0:23,0:23:57.11:0,57,602	0/0:15,0:15:39.07:0,39,395	0/0:30,0:30:58.31:0,58,792	0/0:25,0:25:75.13:0,75,773	0/0:11,0:11:33.08:0,33,353
chr10	39291043	.	G	GT	2315.20	PASS	AB=0.948;AC=11;AF=0.196;AN=56;BaseQRankSum=-9.150;DP=641;FS=1.368;HRun=11;HaplotypeScore=66.9519;InbreedingCoeff=0.6686;MQ=72.51;MQ0=1;MQRankSum=2.082;QD=13.78;ReadPosRankSum=1.774;VQSLOD=3.9907;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,26:34:52.32:653,52,0	0/0:13,0:13:35.85:0,36,276	0/0:16,0:15:17.86:0,18,139	0/1:12,0:12:34.41:46,0,34	0/0:39,0:39:95.59:0,96,743	0/0:14,0:14:41.83:0,42,324	0/0:22,1:23:32.30:0,32,432	0/0:30,0:30:62.65:0,63,475	0/0:24,0:24:62.53:0,63,484	1/1:8,30:39:60.07:812,60,0	1/1:4,17:21:36.35:435,36,0	0/0:29,0:29:74.67:0,75,578	0/0:11,0:11:32.38:0,32,241	0/0:20,0:20:50.25:0,50,379	0/0:22,0:23:55.81:0,56,424	0/0:17,0:18:46.83:0,47,348	0/0:29,0:30:85.70:0,86,654	1/1:4,22:26:51.10:518,51,0	0/1:16,1:17:14.22:14,0,187	0/0:28,1:30:52.28:0,52,577	0/0:21,0:21:50.73:0,51,387	0/0:28,0:28:72.59:0,73,556	0/1:16,2:18:10.11:10,0,292	0/0:13,0:12:26.89:0,27,209	0/0:13,0:13:35.84:0,36,275	0/0:25,1:27:31.28:0,31,409	0/0:41,0:38:94.58:0,95,719	0/0:10,0:10:17.90:0,18,137
chr10	39291486	.	TAAA	T	3581.54	PASS	AB=0.536;AC=9;AF=0.161;AN=56;BaseQRankSum=6.427;DP=616;FS=2.463;HRun=12;HaplotypeScore=127.3639;InbreedingCoeff=0.8643;MQ=73.60;MQ0=1;MQRankSum=-2.236;QD=27.13;ReadPosRankSum=4.015;VQSLOD=2.4941;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,48:55:99:1531,123,0	0/0:10,0:10:24.08:0,24,474	0/0:25,0:23:41.61:0,42,578	0/0:10,0:8:15.05:0,15,268	0/0:27,0:30:72.21:0,72,1276	0/0:10,0:10:30.10:0,30,585	0/0:16,0:17:42.11:0,42,758	0/0:7,0:23:59.21:0,59,837	0/0:20,0:20:57.20:0,57,1110	1/1:4,26:30:78.18:972,78,0	1/1:0,16:16:39.09:493,39,0	0/0:17,0:19:45.11:0,45,815	0/0:2,0:22:24.65:0,25,71	0/1:2,1:15:17.15:17,0,24	0/0:25,0:25:72.22:0,72,1345	0/0:22,0:23:57.17:0,57,1084	0/0:26,0:27:66.20:0,66,1245	1/1:0,16:16:45.14:569,45,0	0/0:10,0:18:39.13:0,39,617	0/0:9,0:25:57.19:0,57,858	0/0:2,0:12:27.08:0,27,381	0/0:18,0:18:48.10:0,48,792	0/0:14,0:14:33.11:0,33,648	0/0:28,0:28:66.23:0,66,1302	0/0:5,0:22:20.07:0,20,60	0/0:4,1:28:37.34:0,37,1001	0/0:2,0:28:66.21:0,66,943	0/0:12,0:29:60.16:0,60,867
chr10	39292530	.	TTCC	T	2174.98	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=9.635;DP=560;FS=6.369;HRun=0;HaplotypeScore=95.1964;InbreedingCoeff=0.9881;MQ=66.53;MQ0=1;MQRankSum=-1.205;QD=29.00;ReadPosRankSum=2.273;VQSLOD=3.6617;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,24:29:54.07:812,54,0	0/0:5,0:5:15.04:0,15,237	0/0:24,0:16:29.30:0,29,622	0/0:18,0:15:20.56:0,21,377	0/0:21,0:21:51.15:0,51,997	0/0:24,0:24:72.25:0,72,1500	0/0:31,0:31:75.23:0,75,1468	0/0:17,0:17:27.06:0,27,427	0/0:15,0:15:39.10:0,39,765	1/1:4,15:19:48.13:669,48,0	1/1:1,13:14:33.11:493,33,0	0/0:22,0:22:51.16:0,51,986	0/0:10,0:27:35.22:0,35,438	0/0:1,0:19:36.12:0,36,485	0/0:17,0:17:42.12:0,42,809	0/0:13,0:13:30.09:0,30,593	0/0:31,0:31:75.19:0,75,1432	1/1:3,10:13:24.08:361,24,0	0/0:15,0:13:30.10:0,30,632	0/0:15,0:15:42.11:0,42,790	0/0:46,0:46:99:0,120,2244	0/0:20,0:20:57.17:0,57,1115	0/0:13,0:13:33.11:0,33,684	0/0:40,0:40:99:0,102,2143	0/0:2,0:8:15.05:0,15,200	0/0:16,0:16:39.11:0,39,712	0/0:18,0:18:45.15:0,45,936	0/0:10,0:10:27.07:0,27,485
chr10	39292837	.	A	AC	2796.64	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-8.257;DP=596;FS=0.428;HRun=8;HaplotypeScore=57.4246;InbreedingCoeff=0.9854;MQ=79.62;MQ0=0;MQRankSum=0.107;QD=19.83;ReadPosRankSum=0.358;VQSLOD=3.3110;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:95.88:0,96,858	0/0:6,0:6:9:0,9,82	0/0:14,0:14:26.96:0,27,234	0/0:18,0:17:47.84:0,48,422	0/0:15,0:15:39.01:0,39,357	0/0:20,0:20:54.01:0,54,490	0/0:33,0:33:80.98:0,81,723	1/1:11,12:23:30.07:334,30,0	0/0:31,0:31:86.99:0,87,783	0/0:17,0:17:36.01:0,36,327	0/0:19,0:19:48:0,48,432	0/0:19,0:19:44.99:0,45,408	0/0:18,0:18:50.99:0,51,456	0/0:21,0:21:45:0,45,410	0/0:19,0:19:54.02:0,54,494	0/0:27,0:27:69.01:0,69,626	0/0:25,1:26:22.33:0,22,453	0/0:30,0:30:72:0,72,653	1/1:4,16:20:42.12:485,42,0	1/1:4,13:16:32.99:360,33,0	1/1:6,26:32:38.80:700,39,0	0/0:20,0:20:54.03:0,54,491	0/0:10,0:10:27.01:0,27,247	0/0:26,0:26:71.96:0,72,644	0/0:19,0:20:53.04:0,53,468	1/1:3,17:20:45.07:493,45,0	1/1:4,20:24:39.12:450,39,0	1/1:0,5:5:15.04:173,15,0
chr10	39293709	.	T	TA	2483.43	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=-9.835;DP=338;FS=0.000;HRun=1;HaplotypeScore=36.3135;InbreedingCoeff=0.7751;MQ=69.60;MQ0=0;MQRankSum=-0.374;QD=31.84;ReadPosRankSum=4.054;VQSLOD=3.1225;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,29:29:72.24:1052,72,0	0/0:8,0:8:24.06:0,24,309	0/0:5,0:5:11.69:0,12,111	0/1:8,0:8:4.56:5,0,129	0/0:18,0:18:54.14:0,54,700	0/0:11,0:11:33.11:0,33,460	0/0:5,0:5:15.04:0,15,192	0/0:32,0:32:96.19:0,96,1199	0/0:7,0:7:21.06:0,21,276	1/1:0,7:7:21.04:268,21,0	1/1:0,7:7:12.04:176,12,0	0/0:7,0:7:18.06:0,18,244	0/0:10,0:10:30.07:0,30,378	0/0:9,0:9:24.08:0,24,321	0/0:5,0:5:15.03:0,15,179	0/0:12,0:12:36.12:0,36,481	0/0:37,0:37:98.82:0,99,1388	1/1:0,27:27:78.26:1141,78,0	0/0:9,0:9:27.09:0,27,377	0/0:11,0:11:33.09:0,33,428	0/0:10,0:10:30.09:0,30,402	0/0:2,0:2:6.02:0,6,84	0/0:8,0:8:21.03:0,21,251	0/0:1,0:1:3.01:0,3,35	0/0:15,0:15:45.12:0,45,571	0/0:15,1:16:4.24:0,4,569	0/0:16,0:16:45.57:0,46,549	0/0:6,0:6:18.06:0,18,242
chr10	39293973	.	TA	T	2636.04	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=3.229;DP=621;FS=13.260;HRun=9;HaplotypeScore=76.3689;InbreedingCoeff=0.9947;MQ=70.83;MQ0=0;MQRankSum=-0.620;QD=23.96;ReadPosRankSum=1.032;VQSLOD=3.4640;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,54:55:99:1345,147,0	0/0:5,0:5:15.04:0,15,173	0/0:12,0:12:24.07:0,24,268	0/0:12,0:12:33.09:0,33,370	0/0:24,0:24:63.19:0,63,725	0/0:22,0:22:66.18:0,66,753	0/0:24,0:24:66.18:0,66,750	0/0:37,0:37:87.24:0,87,988	0/0:26,0:26:69.20:0,69,788	1/1:0,19:19:57.02:518,57,0	1/1:1,12:13:36.02:329,36,0	0/0:29,0:29:87.23:0,87,982	0/0:26,0:26:66.20:0,66,761	0/0:22,0:22:60.18:0,60,691	0/0:21,0:21:54.16:0,54,623	0/0:17,0:17:45.13:0,45,519	0/0:31,0:30:81.24:0,81,935	1/1:0,23:23:66.04:604,66,0	0/0:21,0:22:59.95:0,60,641	0/0:15,0:15:42.07:0,42,462	0/0:30,0:30:81.21:0,81,914	0/0:14,0:14:39.12:0,39,450	0/0:11,0:11:30.08:0,30,336	0/0:21,0:21:60.18:0,60,692	0/0:18,0:18:54.14:0,54,605	0/0:26,0:26:57.17:0,57,658	0/0:26,0:26:69.21:0,69,796	0/0:20,0:20:60.18:0,60,690
chr10	39294376	.	A	ACT	4615.86	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=5.617;DP=561;FS=10.522;HRun=0;HaplotypeScore=98.0945;InbreedingCoeff=0.9000;MQ=65.83;MQ0=5;MQRankSum=-9.100;QD=22.09;ReadPosRankSum=-2.365;VQSLOD=4.4497;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:38:14.70:0,15,165	0/0:6,0:6:15.01:0,15,162	0/0:33,0:15:25:0,25,239	0/1:29,0:16:1.17:1,0,133	0/0:23,0:23:62.55:0,63,741	0/0:17,0:17:42.13:0,42,518	0/0:25,0:25:63.15:0,63,736	1/1:23,10:33:66.03:937,66,0	0/0:12,0:12:30.09:0,30,367	0/0:27,0:27:0.27:0,0,127	0/0:19,0:19:11.18:0,11,88	0/0:14,0:14:42.10:0,42,494	1/1:16,0:16:23.40:159,23,0	1/1:9,0:9:15.42:90,15,0	0/0:15,0:15:33.10:0,33,405	0/0:12,0:12:30.06:0,30,335	0/0:31,0:31:78.18:0,78,944	0/0:21,0:21:25.51:0,26,132	1/1:14,8:22:11.33:642,11,0	1/1:13,5:18:39.08:541,39,0	1/1:10,4:13:24.04:317,24,0	0/0:23,0:23:42.12:0,42,508	0/0:17,0:17:45.12:0,45,543	0/0:15,0:15:39.10:0,39,466	1/1:13,0:13:21.05:232,21,0	1/1:14,4:18:51.15:762,51,0	1/1:3,11:14:21.07:341,21,0	1/1:16,7:23:45.07:595,45,0
chr10	39294387	.	C	CT	2644.15	PASS	AB=0.942;AC=22;AF=0.393;AN=56;BaseQRankSum=11.735;DP=574;FS=10.523;HRun=9;HaplotypeScore=103.0541;InbreedingCoeff=0.5962;MQ=57.59;MQ0=16;MQRankSum=-4.578;QD=8.96;ReadPosRankSum=-0.814;VQSLOD=1.2026;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:18,19:35:75.87:792,76,0	0/0:5,0:5:9:0,9,78	0/0:38,0:13:16.89:0,17,153	0/0:30,0:13:11.11:0,11,99	0/0:21,0:21:53.96:0,54,465	0/0:18,0:18:44.97:0,45,390	0/0:26,0:25:59.97:0,60,520	0/1:31,0:31:53.06:53,0,67	0/0:12,0:12:26.98:0,27,234	1/1:13,16:28:48.35:479,48,0	1/1:12,12:24:51.88:515,52,0	0/0:16,0:16:35.96:0,36,309	0/1:9,2:12:2.45:32,0,2	0/1:7,0:8:8.87:9,0,9	0/0:14,0:14:35.98:0,36,312	0/0:12,0:12:17.95:0,18,153	0/0:37,0:35:80.42:0,80,675	1/1:14,11:23:50.15:527,50,0	0/1:25,0:25:32.33:32,0,131	1/1:16,0:16:23.10:78,23,0	1/1:17,0:16:3.94:23,4,0	0/0:16,0:16:38.99:0,39,338	0/0:16,0:16:41.99:0,42,365	0/0:17,0:17:38.98:0,39,338	1/1:3,0:12:20.04:118,20,0	0/1:23,0:23:4.20:60,0,4	0/1:14,0:14:5.31:35,0,5	1/1:18,0:19:25.98:91,26,0
chr10	39294390	.	TTTTTTTC	T	674.03	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=1.511;DP=554;FS=4.713;HRun=0;HaplotypeScore=148.9355;InbreedingCoeff=0.7076;MQ=53.45;MQ0=24;MQRankSum=-0.905;QD=19.82;ReadPosRankSum=-3.371;VQSLOD=2.6619;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:35:34.99:0,35,1223	0/0:5,0:4:9.02:0,9,129	0/0:38,0:12:21.68:0,22,480	0/0:27,0:10:19.07:0,19,279	0/0:20,0:20:54.12:0,54,1651	0/0:17,0:17:51.16:0,51,1609	0/0:27,0:25:62.69:0,63,1945	0/0:30,0:30:25.55:0,26,1305	0/0:14,0:12:33.09:0,33,960	0/0:27,0:25:54.17:0,54,881	0/0:24,0:24:51.46:0,51,1182	0/0:15,0:15:39.10:0,39,1280	1/1:10,4:12:24.03:393,24,0	1/1:2,6:8:18.06:390,18,0	0/0:14,0:14:39.11:0,39,1097	0/0:10,0:10:24.04:0,24,667	0/0:39,0:36:90.23:0,90,2938	0/0:25,0:22:35.87:0,36,950	0/0:22,0:22:7.70:0,8,855	0/0:15,0:15:17.41:0,17,495	0/0:15,0:14:15.09:0,15,271	0/0:16,0:16:40.37:0,40,1117	0/0:15,0:15:42.14:0,42,1425	0/0:16,0:16:42.12:0,42,1490	0/1:12,0:11:18.25:18,0,390	0/0:22,0:22:56.81:0,57,974	0/0:11,0:11:27.08:0,27,594	0/0:17,0:17:10.31:0,10,592
chr10	39294395	.	TTC	T	430.64	PASS	AB=0.978;AC=13;AF=0.232;AN=56;BaseQRankSum=5.145;DP=545;FS=0.506;HRun=0;HaplotypeScore=100.3079;InbreedingCoeff=0.0949;MQ=50.12;MQ0=28;MQRankSum=-3.202;QD=1.82;ReadPosRankSum=-6.167;VQSLOD=-0.1081;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:38,0:35:45.79:52,0,46	0/0:5,0:4:11.95:0,12,124	0/0:37,0:11:22.66:0,23,248	0/0:25,0:8:6.49:0,6,127	0/0:20,0:20:53.98:0,54,720	0/0:17,0:17:51.14:0,51,698	0/0:26,0:24:61.56:0,62,842	0/1:30,1:31:45.23:45,0,332	0/0:13,0:11:32.88:0,33,426	0/1:24,0:21:10.59:11,0,39	0/1:24,0:24:23.77:24,0,32	0/0:15,0:15:39.04:0,39,546	1/1:11,0:9:20.66:148,21,0	1/1:8,0:8:17.96:147,18,0	0/0:14,0:14:38.95:0,39,497	0/0:10,0:10:23.87:0,24,301	0/0:41,0:37:88.23:0,88,1203	0/1:27,0:22:44.06:44,0,62	0/1:23,0:23:55.22:55,0,265	0/0:11,1:12:19.34:0,19,101	0/0:13,1:13:12.47:0,12,78	0/0:15,0:15:40.34:0,40,528	0/0:15,0:15:45.08:0,45,639	0/0:20,0:17:45.05:0,45,630	0/1:12,0:11:11.39:32,0,11	0/1:23,1:24:23.78:24,0,141	0/0:10,0:10:19.08:0,19,95	0/1:12,2:14:12.99:13,0,103
chr10	39294397	.	C	CTTT	3987	PASS	AB=0.974;AC=26;AF=0.464;AN=56;BaseQRankSum=9.595;DP=552;FS=1.321;HRun=9;HaplotypeScore=104.3332;InbreedingCoeff=0.8263;MQ=48.91;MQ0=30;MQRankSum=-8.310;QD=12.90;ReadPosRankSum=-4.807;VQSLOD=-0.0384;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:37:16.21:141,16,0	0/0:5,0:4:2.95:0,3,33	0/1:33,0:10:1.44:1,0,84	0/0:25,0:8:8.46:0,8,63	0/0:18,0:18:42.11:0,42,528	0/0:18,0:18:42.09:0,42,519	0/0:26,0:24:49.33:0,49,596	1/1:17,15:34:37.83:830,38,0	0/0:13,0:11:26.96:0,27,321	1/1:10,0:21:28.84:109,29,0	1/1:5,0:25:30.52:94,31,0	0/0:13,0:13:36.08:0,36,422	0/0:11,0:9:4.16:0,4,47	0/1:9,0:9:23.28:23,0,53	0/0:13,0:13:27.03:0,27,335	0/0:8,0:8:18.02:0,18,222	0/0:42,0:37:89.20:0,89,1000	1/1:14,0:22:31.61:105,32,0	1/1:9,14:24:45.02:596,45,0	1/1:7,3:12:23.83:341,24,0	1/1:4,10:13:13.41:174,13,0	0/0:15,0:15:27.02:0,27,316	0/0:15,0:15:42.07:0,42,497	0/0:20,0:17:45.10:0,45,548	1/1:9,0:14:29.35:233,29,0	1/1:16,4:22:51.67:569,52,0	1/1:3,6:10:21.07:372,21,0	1/1:8,8:16:29.70:397,30,0
chr10	39294690	.	T	TA	1442.12	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-7.352;DP=577;FS=2.803;HRun=6;HaplotypeScore=68.6826;InbreedingCoeff=0.9781;MQ=83.60;MQ0=0;MQRankSum=-1.203;QD=26.71;ReadPosRankSum=1.926;VQSLOD=4.3076;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,108,1102	0/0:4,0:4:8.99:0,9,83	0/0:20,0:20:32.51:0,33,428	0/0:20,0:20:47.61:0,48,419	0/0:22,0:22:58.68:0,59,586	0/0:19,0:19:51.10:0,51,514	0/0:21,0:21:57.13:0,57,582	0/0:34,0:34:96.21:0,96,979	0/0:20,0:20:57.13:0,57,581	0/0:22,0:22:57.12:0,57,576	0/0:10,0:10:27.06:0,27,275	0/0:10,0:10:27.06:0,27,275	1/1:1,13:14:33.11:415,33,0	1/1:2,20:22:48.15:604,48,0	0/0:23,0:23:69.14:0,69,696	0/0:23,0:23:69.16:0,69,702	0/0:42,0:42:99:0,114,1154	0/0:25,0:25:63.14:0,63,643	0/0:23,0:22:57.11:0,57,574	0/0:22,0:22:57.13:0,57,581	0/0:17,0:17:45.10:0,45,459	0/0:17,0:17:48.11:0,48,489	0/0:9,0:9:27.05:0,27,269	0/0:29,0:29:84.13:0,84,839	1/1:2,16:18:45.14:566,45,0	0/0:16,0:16:42.09:0,42,428	0/0:22,0:22:66.13:0,66,666	0/0:13,0:13:36.08:0,36,367
chr10	39294815	.	GCTTCCACTCTACTAC	G	59.38	PASS	AB=0.879;AC=3;AF=0.054;AN=56;BaseQRankSum=-1.319;DP=547;FS=5.544;HRun=0;HaplotypeScore=225.9547;InbreedingCoeff=-0.0590;MQ=90.38;MQ0=1;MQRankSum=-2.036;QD=1.92;ReadPosRankSum=-4.323;VQSLOD=1.6733;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,141,9849	0/0:7,0:7:21.07:0,21,1493	0/0:29,0:29:84.29:0,84,4764	0/0:21,0:21:63.17:0,63,3154	0/0:15,0:15:39.12:0,39,2455	0/0:24,0:24:72.23:0,72,4849	0/0:19,0:19:57.20:0,57,4098	0/1:17,0:17:28.94:29,0,2367	0/0:31,0:31:93.32:0,93,6738	0/0:22,0:22:60.20:0,60,3990	0/0:12,0:12:30.10:0,30,1745	0/0:17,0:17:51.18:0,51,3506	0/0:12,0:12:36.12:0,36,2598	0/0:19,0:19:57.20:0,57,4203	0/0:25,0:25:75.26:0,75,5172	0/0:27,0:27:81.28:0,81,5527	0/0:31,0:31:93.32:0,93,6463	0/0:33,0:33:99:0,99,7037	0/0:9,0:9:27.09:0,27,1498	0/1:3,4:7:99:102,0,502	0/0:28,0:27:33.07:0,33,2612	0/0:18,0:18:54.19:0,54,3820	0/0:16,0:16:48.16:0,48,3228	0/0:25,0:25:72.25:0,72,5096	0/0:16,0:16:45.15:0,45,2756	0/0:9,0:9:27.09:0,27,1523	0/1:7,0:7:28.26:28,0,722	0/0:3,0:3:9.03:0,9,470
chr10	39294830	.	C	CGGG	2146.96	PASS	AB=0.714;AC=13;AF=0.232;AN=56;BaseQRankSum=-3.662;DP=557;FS=4.772;HRun=5;HaplotypeScore=98.6169;InbreedingCoeff=0.8323;MQ=87.97;MQ0=1;MQRankSum=-2.405;QD=25.87;ReadPosRankSum=-2.553;VQSLOD=0.0678;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,135,1945	0/0:6,0:6:15.04:0,15,202	0/0:30,0:29:72.19:0,72,991	0/0:17,0:17:32.55:0,33,418	0/0:12,0:12:30.09:0,30,423	0/0:22,0:22:63.21:0,63,928	0/0:21,0:21:60.20:0,60,884	1/1:8,6:14:27.06:440,27,0	0/0:31,0:31:87.25:0,87,1242	0/0:26,0:26:63.16:0,63,875	0/0:12,0:12:20.25:0,20,272	0/0:21,0:21:60.15:0,60,845	0/0:10,0:10:27.09:0,27,398	0/0:19,0:19:54.18:0,54,793	0/0:25,0:25:72.24:0,72,1060	0/0:27,0:27:81.23:0,81,1169	0/0:28,0:28:75.24:0,75,1103	0/0:37,0:37:99:0,99,1411	1/1:2,5:7:15.05:310,15,0	1/1:5,0:5:6.02:117,6,0	1/1:5,27:34:42.04:841,42,0	0/0:18,0:18:44.68:0,45,661	0/0:17,0:17:42.09:0,42,594	0/0:23,0:23:57.19:0,57,838	0/0:22,0:22:54.17:0,54,784	0/1:6,3:10:69.95:198,0,70	1/1:2,8:10:18.06:353,18,0	1/1:1,1:2:3.01:65,3,0
chr10	39294837	.	T	TG	3125.37	PASS	AB=0.925;AC=10;AF=0.179;AN=56;BaseQRankSum=-8.262;DP=557;FS=10.654;HRun=8;HaplotypeScore=71.8003;InbreedingCoeff=0.6626;MQ=86.95;MQ0=1;MQRankSum=0.732;QD=20.70;ReadPosRankSum=0.569;VQSLOD=3.2727;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,46:54:87.67:1315,88,0	0/0:4,0:5:14.04:0,14,116	0/0:29,0:28:65.90:0,66,584	0/1:15,1:16:13.61:14,0,194	0/0:12,0:13:29.04:0,29,252	0/0:22,0:22:60.02:0,60,548	0/0:25,0:25:56.98:0,57,516	0/0:16,0:16:2.25:0,2,92	0/0:29,0:29:71.98:0,72,649	1/1:5,19:24:57.17:656,57,0	1/1:1,12:13:27.08:309,27,0	0/0:21,0:21:26.27:0,26,390	0/0:11,0:11:33:0,33,296	0/0:18,0:18:45.02:0,45,411	0/0:24,0:25:65.06:0,65,582	0/0:27,0:28:59.03:0,59,523	0/0:25,0:25:66.49:0,66,599	1/1:5,29:34:62.80:977,63,0	0/0:7,0:7:11.81:0,12,97	0/0:5,0:5:0.02:0,0,0	0/0:36,0:36:46.88:0,47,389	0/0:17,0:17:36.01:0,36,327	0/0:18,0:18:44.96:0,45,399	0/0:21,0:21:56.99:0,57,514	0/0:20,0:20:57.03:0,57,520	0/1:9,1:10:20.03:20,0,64	0/0:13,0:13:14.16:0,14,114	0/0:1,0:1:2.99:0,3,24
chr10	39295172	.	A	ATAT	6496.90	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=3.482;DP=578;FS=0.000;HRun=0;HaplotypeScore=122.8350;InbreedingCoeff=0.9122;MQ=66.55;MQ0=22;MQRankSum=-11.220;QD=32.98;ReadPosRankSum=-1.751;VQSLOD=4.6739;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,23:23:9.92:222,10,0	0/0:8,0:8:24.08:0,24,437	0/0:47,0:24:72.25:0,72,1274	0/0:55,0:31:79.96:0,80,1521	0/0:15,0:15:45.14:0,45,794	0/0:18,0:18:48.16:0,48,864	0/0:33,0:32:90.32:0,90,1658	1/1:5,23:28:77.57:1851,78,0	0/0:26,0:26:75.26:0,75,1369	1/1:2,16:15:42.09:1025,42,0	1/1:1,4:5:3.48:74,3,0	0/0:20,0:20:54.19:0,54,1000	1/1:0,15:17:18.06:433,18,0	1/1:1,14:15:15.05:353,15,0	0/0:26,0:26:72.23:0,72,1301	0/0:22,0:22:63.22:0,63,1171	0/0:28,0:28:72.25:0,72,1334	1/1:2,7:9:15.74:419,16,0	1/1:1,6:7:21.07:513,21,0	1/1:0,7:7:6.91:149,7,0	1/1:3,23:23:5.66:79,6,0	0/0:23,0:23:63.19:0,63,1106	0/0:10,0:10:17.48:0,17,332	0/0:50,0:50:99:0,141,2539	1/1:0,8:9:6.91:132,7,0	1/1:3,9:12:30.10:729,30,0	1/1:0,4:4:12.04:295,12,0	1/1:1,3:4:9.03:222,9,0
chr10	39295201	.	GCA	G	52.70	PASS	AB=0.928;AC=6;AF=0.111;AN=54;BaseQRankSum=3.006;DP=640;FS=0.849;HRun=0;HaplotypeScore=138.9608;InbreedingCoeff=0.2482;MQ=47.82;MQ0=17;MQRankSum=1.935;QD=0.84;ReadPosRankSum=-1.380;VQSLOD=2.5439;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:27:8.49:0,8,54	0/0:6,0:6:18.05:0,18,256	0/0:19,0:3:6.02:0,6,80	0/0:31,0:9:14.91:0,15,170	0/1:17,1:18:23.71:24,0,494	0/1:18,1:20:99:112,0,288	0/0:41,0:41:26.87:0,27,960	0/0:29,0:29:11.02:0,11,94	0/0:33,2:35:8.08:0,8,1006	0/0:28,0:29:25.66:0,26,252	0/0:7,0:8:2.04:0,2,6	0/0:27,2:29:25.40:0,25,689	./.	1/1:10,0:10:2.74:12,3,0	0/0:32,1:33:68.50:0,69,954	0/0:17,0:17:50.73:0,51,717	0/0:33,0:33:70.73:0,71,1009	0/0:14,0:14:5.80:0,6,54	0/0:15,0:15:7.73:0,8,86	0/0:13,0:13:3:0,3,26	0/0:39,0:34:2.63:0,3,25	0/0:25,1:26:12.45:0,12,623	0/0:14,0:14:20.25:0,20,259	0/0:58,1:59:32.27:0,32,1581	1/1:15,0:15:2.35:8,2,0	0/0:29,0:28:42.31:0,42,395	0/0:11,0:10:12.25:0,12,105	0/0:7,0:6:6.01:0,6,63
chr10	39295542	.	C	CGCT	2250.92	PASS	AB=0.888;AC=26;AF=0.481;AN=54;BaseQRankSum=5.309;DP=523;FS=0.430;HRun=0;HaplotypeScore=114.6961;InbreedingCoeff=0.6115;MQ=88.82;MQ0=2;MQRankSum=-4.504;QD=8.13;ReadPosRankSum=2.903;VQSLOD=3.0892;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,9:20:2.65:35,3,0	0/1:5,0:5:11.63:12,0,35	0/0:27,0:26:68.73:0,69,1006	0/0:21,0:20:42.26:0,42,574	0/1:13,0:13:9.58:10,0,64	0/0:16,0:16:33.07:0,33,396	0/0:29,0:29:56.77:0,57,655	1/1:19,0:19:22.62:380,23,0	0/0:17,0:17:17.92:0,18,228	1/1:4,9:18:32.42:260,32,0	./.	0/0:20,0:20:17.80:0,18,190	1/1:0,1:22:5.55:97,6,0	1/1:0,0:27:9.03:146,9,0	0/0:22,0:22:29.84:0,30,363	0/0:15,0:14:16.42:0,16,206	0/0:24,0:24:38.54:0,39,334	0/1:2,0:10:37.82:40,0,38	1/1:22,0:22:30.88:376,31,0	1/1:20,0:20:25.27:117,25,0	1/1:34,0:34:74.49:457,74,0	0/0:18,0:18:8.29:0,8,86	0/0:12,0:12:8.90:0,9,146	0/0:20,0:20:32.53:0,33,411	1/1:0,1:14:3.01:49,3,0	1/1:25,0:25:54.88:400,55,0	0/1:19,0:19:11.95:44,0,12	1/1:8,0:8:8.77:29,9,0
chr10	39296077	.	T	TGTG	1623.68	PASS	AB=0.764;AC=18;AF=0.321;AN=56;BaseQRankSum=3.534;DP=648;FS=42.591;HRun=0;HaplotypeScore=121.1776;InbreedingCoeff=0.4402;MQ=63.95;MQ0=39;MQRankSum=-0.105;QD=6.49;ReadPosRankSum=-2.785;VQSLOD=0.8125;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,1:35:25.34:0,25,675	0/0:7,0:7:20.28:0,20,246	0/0:44,0:25:72.20:0,72,845	0/0:58,0:30:71.41:0,71,930	0/0:19,0:20:53.50:0,53,650	0/0:10,0:10:27.05:0,27,341	0/0:20,0:23:47.79:0,48,586	1/1:26,0:19:41.04:492,41,0	0/0:24,0:26:67.87:0,68,842	0/1:22,3:26:99:151,0,628	0/1:12,1:17:65.11:65,0,252	0/0:13,0:25:51.64:0,52,681	0/0:14,0:14:5.90:0,6,299	0/1:16,0:16:6.35:6,0,314	0/0:12,0:20:43.02:0,43,548	0/0:13,0:15:36.12:0,36,475	0/0:15,0:31:30.89:0,31,669	0/1:13,0:20:99:120,0,226	1/1:3,0:12:22.30:229,22,0	1/1:7,0:12:1.12:38,1,0	1/1:17,0:29:10.25:151,10,0	0/0:10,0:19:47.96:0,48,534	0/0:10,0:16:36.96:0,37,454	0/0:14,0:27:54.14:0,54,686	0/1:12,1:23:11.11:11,0,368	0/1:5,0:17:31.48:233,0,31	1/1:1,0:13:16.07:135,16,0	1/1:11,0:10:6.94:176,7,0
chr10	39296465	.	CTGTG	C	1074.07	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=7.604;DP=624;FS=2.715;HRun=0;HaplotypeScore=114.9740;InbreedingCoeff=0.8624;MQ=64.71;MQ0=3;MQRankSum=-0.198;QD=19.53;ReadPosRankSum=2.435;VQSLOD=3.6123;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:8.98:0,9,73	0/0:7,0:7:12.04:0,12,289	0/0:28,0:19:21.07:0,21,384	0/0:26,0:17:23.99:0,24,431	0/0:15,0:16:26.83:0,27,548	0/0:19,0:19:51.16:0,51,1194	0/0:33,1:35:19.69:0,20,1463	0/0:26,0:24:48.13:0,48,874	0/0:37,0:39:99:0,99,2266	0/0:29,0:28:54.12:0,54,1001	0/0:12,0:12:2.04:0,2,6	0/0:22,0:22:57.20:0,57,1390	1/1:8,13:21:30.10:495,30,0	1/1:8,12:20:24.08:396,24,0	0/0:37,0:37:74.71:0,75,1650	0/0:35,0:35:78.12:0,78,1734	0/0:25,0:25:51.16:0,51,1181	0/0:16,0:16:15.01:0,15,232	0/0:14,0:14:22.83:0,23,377	0/0:9,0:8:8.50:0,9,108	0/0:19,0:18:15.02:0,15,274	0/0:13,0:13:27.09:0,27,661	0/0:15,0:15:33.07:0,33,705	0/0:39,0:39:90.07:0,90,2179	1/1:5,8:14:21.06:324,21,0	0/0:30,0:29:57.20:0,57,1096	0/0:16,0:19:20.99:0,21,339	0/0:12,0:13:9.03:0,9,162
chr10	39296523	.	T	TATGCCTG	2306.49	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-0.913;DP=541;FS=1.726;HRun=0;HaplotypeScore=138.5265;InbreedingCoeff=0.9350;MQ=90.24;MQ0=0;MQRankSum=-7.984;QD=40.46;ReadPosRankSum=-1.184;VQSLOD=3.4432;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:13,7:22:18.06:561,18,0	0/0:6,0:6:12.04:0,12,285	0/0:26,0:26:42.14:0,42,984	0/0:31,0:29:48.14:0,48,987	0/0:8,0:8:18.06:0,18,428	0/0:27,0:27:63.20:0,63,1416	0/0:34,0:34:81.28:0,81,1872	0/0:37,0:37:54.19:0,54,1279	0/0:29,0:29:48.16:0,48,1137	1/1:8,7:15:24.55:883,25,0	1/1:2,3:5:9.03:334,9,0	0/0:27,0:27:69.24:0,69,1561	0/0:19,0:19:48.16:0,48,1141	0/0:12,0:12:21.07:0,21,497	0/0:22,0:22:63.22:0,63,1495	0/0:26,0:26:66.23:0,66,1544	0/0:28,0:28:72.18:0,72,1581	1/1:9,5:15:19.31:682,19,0	0/0:23,0:23:42.09:0,42,832	0/0:6,0:6:18.06:0,18,424	0/0:20,0:20:51.15:0,51,1134	0/0:12,0:12:21.07:0,21,473	0/0:9,0:9:24.08:0,24,513	0/0:28,0:28:63.04:0,63,1447	0/0:12,0:12:27.09:0,27,642	0/0:23,0:23:57.20:0,57,1350	0/0:13,0:13:30.10:0,30,690	0/0:6,0:6:6.02:0,6,116
chr10	39296650	.	C	CTT	3602.98	PASS	AB=0.800;AC=28;AF=0.500;AN=56;BaseQRankSum=7.043;DP=409;FS=7.816;HRun=13;HaplotypeScore=88.9364;InbreedingCoeff=0.7470;MQ=60.53;MQ0=0;MQRankSum=-4.635;QD=15.73;ReadPosRankSum=-5.328;VQSLOD=1.1096;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:6,18:26:15.62:239,16,0	0/0:7,0:8:17.66:0,18,142	0/0:9,0:8:4.18:0,4,50	0/0:12,0:8:2.92:0,3,26	0/0:15,0:19:3.97:0,4,109	0/0:9,0:9:17.83:0,18,148	0/0:16,0:19:20.28:0,20,257	1/1:29,0:30:47.28:388,47,0	0/0:18,0:19:26.45:0,26,286	1/1:4,13:20:42.10:387,42,0	1/1:2,11:13:22.78:247,23,0	0/0:11,0:12:27.63:0,28,208	1/1:5,8:13:23.96:240,24,0	1/1:5,3:8:18.03:199,18,0	0/0:16,0:16:23.80:0,24,211	0/0:10,0:13:17.84:0,18,203	0/0:15,0:18:17.56:0,18,246	0/1:5,7:15:47.37:205,0,47	1/1:12,2:19:42.63:388,43,0	1/1:16,1:18:36.03:304,36,0	1/1:4,0:8:3.47:30,3,0	0/0:11,0:12:17.82:0,18,199	0/1:9,0:10:29.75:30,0,136	0/0:13,0:13:23.59:0,24,188	1/1:17,0:17:47.96:426,48,0	1/1:12,0:14:28.97:239,29,0	1/1:5,0:6:6.87:52,7,0	1/1:6,1:10:24:229,24,0
chr10	39296658	.	T	TTA	903.79	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=4.816;DP=404;FS=4.688;HRun=0;HaplotypeScore=75.4531;InbreedingCoeff=0.0862;MQ=59.01;MQ0=0;MQRankSum=-2.705;QD=6.95;ReadPosRankSum=4.662;VQSLOD=2.7305;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:25:56.84:57,0,90	0/0:7,0:7:21.05:0,21,265	0/0:10,0:8:8.30:0,8,121	0/0:9,0:4:11.95:0,12,120	0/0:21,0:21:59.64:0,60,575	0/0:11,0:11:33.06:0,33,387	0/0:18,0:18:50.78:0,51,583	0/0:31,0:29:60.41:0,60,399	0/0:17,0:17:50.82:0,51,600	0/1:23,0:23:48.47:48,0,106	0/1:16,0:16:37.70:38,0,112	0/0:14,0:14:42.03:0,42,491	0/1:12,0:12:7.81:50,0,8	0/1:7,0:7:15.95:43,0,16	0/0:13,0:13:39.09:0,39,474	0/0:14,0:14:35.92:0,36,434	0/0:15,0:15:38.78:0,39,481	0/1:16,0:16:38.17:38,0,174	0/0:19,0:19:6.15:0,6,194	0/1:15,0:15:0.54:1,0,90	0/0:5,0:5:5.19:0,5,45	0/0:10,0:10:29.92:0,30,381	0/0:12,0:12:28.36:0,28,318	0/0:14,0:14:39.06:0,39,454	1/1:1,15:16:48.16:768,48,0	0/0:17,0:17:22.85:0,23,251	0/0:5,0:5:5.87:0,6,48	0/0:12,0:12:11.22:0,11,145
chr10	39296691	.	GT	G	1975.44	PASS	AB=0.630;AC=19;AF=0.339;AN=56;BaseQRankSum=7.270;DP=351;FS=19.374;HRun=10;HaplotypeScore=54.0009;InbreedingCoeff=0.7803;MQ=56.68;MQ0=5;MQRankSum=-2.180;QD=16.33;ReadPosRankSum=1.578;VQSLOD=2.4314;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:33.04:0,33,343	0/0:10,0:10:27.07:0,27,299	0/0:10,0:2:3:0,3,29	0/0:9,0:4:4.56:0,5,35	0/0:18,1:19:25.09:0,25,482	0/0:14,0:14:38.03:0,38,422	0/0:13,0:13:33.08:0,33,356	0/1:12,17:28:14.25:361,0,14	0/0:11,0:11:30.08:0,30,332	0/0:16,1:16:7.40:0,7,294	0/0:12,1:13:10.02:0,10,322	0/0:12,0:12:8.26:0,8,307	1/1:3,4:8:14.03:110,14,0	1/1:2,2:4:6:52,6,0	0/0:16,0:16:45.11:0,45,489	0/0:13,0:13:30.03:0,30,299	0/0:10,0:10:21.06:0,21,232	0/0:18,0:18:10.11:0,10,331	1/1:7,7:12:19.01:179,19,0	1/1:1,13:14:38.99:338,39,0	1/1:0,1:1:3:26,3,0	0/0:3,0:3:9.02:0,9,100	0/0:11,0:12:23.90:0,24,244	0/0:12,0:12:36.05:0,36,376	1/1:2,16:18:44.99:390,45,0	1/1:0,16:16:44.99:390,45,0	1/1:0,7:7:12:104,12,0	1/1:2,8:10:26.90:225,27,0
chr10	39296897	.	CGCTTTTTTTTTTTT	C	435.18	PASS	AB=0.919;AC=16;AF=0.286;AN=56;BaseQRankSum=1.829;DP=290;FS=0.000;HRun=0;HaplotypeScore=72.2032;InbreedingCoeff=0.4721;MQ=55.32;MQ0=42;MQRankSum=-5.883;QD=4.58;ReadPosRankSum=-1.823;VQSLOD=1.2815;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,15:19:6.42:112,6,0	0/0:3,0:3:9.03:0,9,405	0/0:38,0:5:14.39:0,14,173	0/0:29,0:6:14.73:0,15,103	0/0:10,0:9:21.07:0,21,689	0/0:11,0:10:27.09:0,27,1251	0/0:11,0:10:30.10:0,30,1282	0/1:9,3:10:9.59:41,0,10	0/0:6,0:6:12.04:0,12,594	1/1:8,0:8:11.62:135,12,0	1/1:6,1:6:3.46:25,3,0	0/0:6,0:5:15.05:0,15,525	0/0:6,0:4:12.04:0,12,294	0/0:8,0:8:21.07:0,21,621	0/0:8,0:7:20.28:0,20,931	0/0:4,0:4:12.04:0,12,496	0/0:16,0:15:24.55:0,25,1138	0/1:11,0:6:4.04:24,0,4	1/1:6,0:1:0.47:1,0,0	0/1:6,0:6:22.45:22,0,27	0/0:8,0:2:1.55:0,2,4	0/0:6,0:6:9.03:0,9,537	0/0:4,0:3:9.03:0,9,429	0/0:16,0:14:17.18:0,17,714	0/0:5,0:4:12.04:0,12,274	1/1:0,5:5:5.19:18,5,0	0/1:6,1:7:42.43:99,0,42	1/1:6,1:3:5.85:118,6,0
chr10	39297750	.	T	TC	12594.36	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-13.437;DP=688;FS=2.040;HRun=4;HaplotypeScore=69.0319;InbreedingCoeff=0.9988;MQ=72.64;MQ0=0;MQRankSum=-1.044;QD=33.77;ReadPosRankSum=0.750;VQSLOD=5.4840;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,32:33:87.29:1190,87,0	0/0:14,0:14:39.11:0,39,441	0/0:18,0:16:21.80:0,22,235	0/0:13,0:12:27.06:0,27,285	0/0:18,0:18:45.11:0,45,500	0/0:21,0:21:63.18:0,63,712	0/0:29,0:29:84.22:0,84,940	1/1:5,20:26:54.15:700,54,0	0/0:31,0:31:90.23:0,90,1001	1/1:2,21:23:63.18:827,63,0	1/1:0,18:18:39.13:526,39,0	0/0:23,0:23:57.16:0,57,646	1/1:3,23:26:69.23:942,69,0	1/1:2,31:33:87.27:1164,87,0	0/0:26,0:26:78.20:0,78,867	0/0:23,0:23:69.18:0,69,772	0/0:33,0:33:96.25:0,96,1076	1/1:2,32:34:35.48:1093,35,0	1/1:1,19:20:57.12:726,57,0	1/1:3,19:22:51.10:674,51,0	1/1:1,58:59:99:2093,154,0	0/0:19,0:19:51.15:0,51,578	0/0:19,0:19:54.15:0,54,612	0/0:28,0:27:81.19:0,81,903	1/1:1,17:18:39.13:533,39,0	1/1:2,22:24:66.22:897,66,0	1/1:4,26:29:68.98:943,69,0	1/1:0,7:7:21.07:287,21,0
chr10	39298243	.	A	ATAT	10638.47	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-11.421;DP=633;FS=4.009;HRun=0;HaplotypeScore=83.3539;InbreedingCoeff=0.9971;MQ=82.93;MQ0=0;MQRankSum=-7.408;QD=60.45;ReadPosRankSum=-4.260;VQSLOD=5.4289;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:87.29:0,87,1482	0/0:10,0:10:30.09:0,30,501	0/0:19,0:19:53.39:0,53,853	0/0:20,0:20:49.68:0,50,834	0/0:28,0:28:78.27:0,78,1375	0/0:27,0:26:78.27:0,78,1372	0/0:13,0:13:39.11:0,39,632	1/1:10,18:31:84.25:1814,84,0	0/0:27,0:27:78.27:0,78,1375	0/0:26,0:26:75.26:0,75,1323	0/0:29,0:29:78.25:0,78,1345	0/0:12,0:12:36.12:0,36,635	0/0:24,0:24:66.23:0,66,1159	0/0:14,0:14:39.11:0,39,658	0/0:27,0:27:78.27:0,78,1376	0/0:15,0:15:42.13:0,42,713	0/0:30,0:30:90.31:0,90,1587	0/0:31,0:31:81.26:0,81,1399	1/1:1,23:25:75.26:1710,75,0	1/1:4,32:37:99:2447,108,0	1/1:2,16:18:39.13:886,39,0	0/0:19,0:19:57.18:0,57,976	0/0:28,0:28:84.29:0,84,1479	0/0:10,0:10:27.05:0,27,443	0/0:18,0:18:51.15:0,51,844	1/1:2,19:23:16.39:1341,16,0	1/1:6,27:34:81.28:1873,81,0	1/1:0,8:8:24.08:566,24,0
chr10	39298855	.	GCA	G	2952.08	PASS	AB=0.842;AC=30;AF=0.556;AN=54;BaseQRankSum=-3.381;DP=423;FS=14.214;HRun=0;HaplotypeScore=74.1891;InbreedingCoeff=0.7269;MQ=51.80;MQ0=10;MQRankSum=5.055;QD=13.30;ReadPosRankSum=7.112;VQSLOD=1.5483;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:29:17.26:0,17,194	1/1:0,4:5:14.88:151,15,0	./.	0/1:33,0:10:7.37:7,0,73	1/1:5,5:10:15.04:171,15,0	0/1:7,4:13:25.47:144,0,25	1/1:6,6:12:9.02:103,9,0	0/0:22,0:22:32.45:0,32,393	1/1:3,5:8:15.04:171,15,0	0/0:9,0:17:15.49:0,15,152	0/0:3,0:10:5.01:0,5,37	1/1:2,10:13:29.92:322,30,0	1/1:6,0:10:18.60:88,19,0	1/1:3,0:10:17.04:84,17,0	1/1:2,6:9:20.89:219,21,0	1/1:4,7:13:23.73:233,24,0	1/1:7,18:26:53.03:542,53,0	0/0:7,0:19:10.21:0,10,75	0/0:10,0:14:13.05:0,13,83	0/0:7,0:15:15.31:0,15,74	0/0:21,0:21:2.85:0,3,24	1/1:6,7:13:1.15:244,1,0	1/1:4,9:13:26.81:286,27,0	1/1:15,6:21:27.04:293,27,0	1/1:2,0:11:19.89:98,20,0	0/0:4,0:9:18.03:0,18,196	0/0:7,0:8:4.02:0,4,87	0/0:3,0:8:23.49:0,23,173
chr10	39298986	.	TAA	T	1129.81	PASS	AB=0.846;AC=12;AF=0.222;AN=54;BaseQRankSum=6.613;DP=337;FS=2.981;HRun=15;HaplotypeScore=54.4334;InbreedingCoeff=0.6267;MQ=91.19;MQ0=0;MQRankSum=-2.699;QD=10.86;ReadPosRankSum=-0.189;VQSLOD=2.0252;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:21:24.03:0,24,236	0/0:4,0:4:9.03:0,9,122	0/0:24,0:17:20.34:0,20,195	0/1:28,0:24:35.43:35,0,84	0/0:19,0:23:56.84:0,57,618	0/0:12,0:12:1.28:0,1,268	0/0:11,0:11:20.96:0,21,227	1/1:10,11:22:32.51:323,33,0	0/0:9,0:9:23.97:0,24,231	0/0:8,0:13:27.02:0,27,277	0/0:2,0:4:8.65:0,9,60	0/0:12,0:12:30:0,30,325	0/0:2,0:6:4.99:0,5,17	0/0:9,0:13:10.50:0,10,66	0/0:5,0:5:12.02:0,12,133	0/0:6,0:6:12.03:0,12,149	0/0:27,0:28:75.12:0,75,903	0/0:6,0:21:42.03:0,42,420	1/1:0,11:11:32.97:285,33,0	1/1:3,4:7:11.95:105,12,0	./.	0/0:2,0:2:3.01:0,3,41	0/0:5,0:5:15.03:0,15,186	0/0:4,0:4:6:0,6,65	0/0:2,0:7:15.36:0,15,83	0/1:5,4:9:49.35:88,0,49	1/1:1,6:7:14.97:132,15,0	1/1:6,13:20:38.73:333,39,0
chr10	39299303	.	GAA	G	1391.72	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=3.400;DP=523;FS=3.364;HRun=13;HaplotypeScore=67.2733;InbreedingCoeff=0.8778;MQ=62.39;MQ0=21;MQRankSum=2.822;QD=15.46;ReadPosRankSum=3.723;VQSLOD=2.7840;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,22:29:54:523,54,0	0/0:5,0:5:12.04:0,12,158	0/0:24,0:6:7.16:0,7,101	0/0:27,0:13:1.52:0,2,111	0/0:32,0:35:79.59:0,80,943	0/0:17,0:17:31.39:0,31,406	0/0:16,0:18:32.60:0,33,439	0/0:28,0:30:69.24:0,69,840	0/0:10,0:11:20.52:0,21,246	1/1:6,17:22:42.92:483,43,0	1/1:2,10:12:27.04:262,27,0	0/0:15,0:15:40.85:0,41,516	0/0:4,0:10:9.01:0,9,86	0/0:3,0:10:15.03:0,15,147	0/0:11,0:13:32.58:0,33,410	0/0:13,0:13:26.58:0,27,357	0/0:35,0:39:93.24:0,93,1218	1/1:9,15:24:23.94:282,24,0	0/0:18,0:16:34.30:0,34,418	0/0:15,0:17:47.57:0,48,593	0/0:15,0:15:31.63:0,32,346	0/0:13,0:11:21.07:0,21,304	0/0:7,0:7:14.54:0,15,183	0/0:21,0:21:50.61:0,51,635	0/0:4,0:15:11.81:0,12,101	0/0:18,0:19:50.59:0,51,635	0/0:11,0:10:21.05:0,21,270	0/0:17,0:13:20.99:0,21,257
chr10	39299641	.	G	GA	5203.55	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-1.503;DP=625;FS=0.709;HRun=8;HaplotypeScore=62.8235;InbreedingCoeff=0.9982;MQ=70.67;MQ0=0;MQRankSum=-2.457;QD=28.43;ReadPosRankSum=-1.418;VQSLOD=4.7838;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:45:0,45,406	0/0:14,0:14:42.02:0,42,384	0/0:17,0:15:36:0,36,325	0/0:10,0:9:17.93:0,18,151	0/0:39,0:39:99:0,111,1011	0/0:24,0:24:60.02:0,60,549	0/0:26,0:26:66.01:0,66,600	1/1:7,28:35:87.13:946,87,0	0/0:16,0:16:42.02:0,42,384	0/0:26,0:25:63.03:0,63,577	0/0:20,0:20:48.02:0,48,439	0/0:24,0:24:60.01:0,60,545	0/0:16,0:16:45.02:0,45,412	0/0:19,0:20:53.06:0,53,473	0/0:23,0:23:63.02:0,63,577	0/0:34,0:34:96.05:0,96,879	0/0:21,0:21:57.02:0,57,522	0/0:15,0:15:38.98:0,39,349	1/1:3,17:20:54.08:606,54,0	1/1:4,34:39:74.63:1080,75,0	1/1:1,11:12:30.09:346,30,0	0/0:16,0:16:42:0,42,380	0/0:22,0:22:59.77:0,60,543	0/0:11,0:11:30.01:0,30,275	0/0:30,0:30:75.02:0,75,682	1/1:3,30:34:68.65:1026,69,0	1/1:2,25:27:63.19:727,63,0	1/1:1,15:16:42.10:473,42,0
chr10	39300277	.	GCCAAAA	G	3660.83	PASS	AB=0.994;AC=23;AF=0.411;AN=56;BaseQRankSum=0.427;DP=375;FS=6.576;HRun=0;HaplotypeScore=80.8121;InbreedingCoeff=0.7243;MQ=65.25;MQ0=16;MQRankSum=-3.431;QD=21.41;ReadPosRankSum=0.307;VQSLOD=2.4865;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:19:10.23:0,10,133	0/0:5,0:4:12.04:0,12,245	0/0:59,0:18:45.52:0,46,649	0/1:53,0:17:30.16:30,0,217	0/0:22,0:22:63.21:0,63,1405	0/0:10,0:10:30.09:0,30,798	0/0:10,0:10:27.09:0,27,599	1/1:5,4:9:27.09:541,27,0	0/0:7,0:7:17.20:0,17,467	0/1:12,0:11:3.27:3,0,101	0/0:9,0:9:9.41:0,9,167	0/0:6,0:6:18.06:0,18,535	1/1:0,0:6:5.96:44,6,0	1/1:3,0:6:12.04:173,12,0	0/0:7,0:7:18.06:0,18,423	0/0:11,0:11:30.09:0,30,568	0/0:15,0:15:38.72:0,39,920	0/1:8,0:8:4.61:5,0,100	1/1:5,0:6:18.03:234,18,0	1/1:4,10:12:29.78:632,30,0	1/1:0,4:5:9.03:179,9,0	0/0:3,0:3:9.03:0,9,131	0/0:7,0:7:21.07:0,21,492	0/0:9,0:9:23.29:0,23,609	1/1:0,0:9:9.03:143,9,0	1/1:10,6:16:45.15:899,45,0	1/1:7,5:14:39.13:716,39,0	1/1:0,0:5:3.01:62,3,0
chr10	39300297	.	AAGG	A	1699.28	PASS	AB=0.986;AC=20;AF=0.357;AN=56;BaseQRankSum=7.413;DP=640;FS=7.632;HRun=0;HaplotypeScore=110.1158;InbreedingCoeff=0.1903;MQ=42.78;MQ0=39;MQRankSum=-6.242;QD=4.97;ReadPosRankSum=-2.257;VQSLOD=1.5764;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:26:99:111,0,166	0/0:8,0:7:19.25:0,19,204	0/1:111,0:6:1.56:2,0,77	0/0:104,0:19:10.40:0,10,158	0/0:28,0:27:57.83:0,58,767	0/0:14,0:15:33.79:0,34,434	0/0:14,0:12:27.23:0,27,249	0/1:14,0:13:21.38:21,0,52	0/0:13,0:13:33.57:0,34,372	0/1:31,3:30:99:233,0,412	0/1:17,0:15:99:177,0,134	0/0:9,0:9:3.66:0,4,332	1/1:10,0:10:23.47:182,23,0	1/1:8,0:7:6.78:83,7,0	0/0:21,0:21:47.45:0,47,636	0/0:17,0:17:29.09:0,29,453	0/0:32,0:31:36.61:0,37,654	0/1:14,1:15:99:167,0,165	0/1:11,0:9:24.38:74,0,24	0/1:24,0:20:24.52:216,0,25	1/1:6,0:6:3.73:28,4,0	0/1:5,0:4:0.62:1,0,31	0/0:13,0:13:31.35:0,31,346	0/0:17,0:17:45.39:0,45,536	1/1:16,0:14:14.02:143,14,0	0/1:21,0:21:10.45:199,0,10	1/1:22,0:21:10.80:238,11,0	0/0:6,0:6:5.65:0,6,17
chr10	39300298	.	AGG	A	1639.34	PASS	AB=0.811;AC=17;AF=0.304;AN=56;BaseQRankSum=7.460;DP=633;FS=6.727;HRun=2;HaplotypeScore=101.6799;InbreedingCoeff=0.0834;MQ=41.37;MQ0=41;MQRankSum=-5.323;QD=7.35;ReadPosRankSum=-2.127;VQSLOD=-0.5109;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:11,15:24:95.19:95,0,144	0/0:8,0:7:13.02:0,13,169	0/0:105,3:6:1.55:0,2,79	0/0:102,1:18:9.13:0,9,134	0/0:28,0:27:34.82:0,35,621	0/0:13,0:13:15.44:0,15,351	0/0:15,0:13:21.98:0,22,266	0/1:13,1:13:4.69:5,0,88	0/0:13,0:13:32.99:0,33,332	0/1:27,8:31:99:259,0,302	0/1:12,5:15:98.54:174,0,99	0/0:9,0:9:3.65:0,4,274	1/1:6,4:10:22.65:178,23,0	1/1:5,3:7:2.31:70,2,0	0/0:21,0:21:46.46:0,46,571	0/0:17,0:17:11.56:0,12,379	0/0:30,1:29:30.67:0,31,567	0/1:12,2:14:99:179,0,145	0/1:9,2:9:37.76:63,0,38	0/1:19,6:21:29.59:240,0,30	1/1:5,0:5:1.87:18,2,0	0/0:5,0:4:2.89:0,3,25	0/0:13,0:13:31.27:0,31,324	0/0:17,0:17:44.36:0,44,429	1/1:14,2:14:13.06:136,13,0	0/1:15,5:20:35.69:166,0,36	0/1:17,5:21:15.94:219,0,16	0/0:3,1:4:7.40:0,7,30
chr10	39300300	.	G	GA	553.86	PASS	AB=0.957;AC=14;AF=0.250;AN=56;BaseQRankSum=4.435;DP=665;FS=5.965;HRun=10;HaplotypeScore=117.5667;InbreedingCoeff=0.3319;MQ=40.06;MQ0=45;MQRankSum=-3.479;QD=2.76;ReadPosRankSum=-0.856;VQSLOD=0.2438;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:26:21.72:50,0,22	0/0:8,0:7:17.62:0,18,125	0/0:112,0:6:0.45:0,0,1	0/0:103,1:17:9.44:0,9,71	0/0:29,0:28:55.44:0,55,382	0/0:14,0:14:34.68:0,35,248	0/0:14,0:13:29.03:0,29,194	0/0:15,0:14:2.67:0,3,41	0/0:14,0:14:29.10:0,29,217	0/1:32,3:31:4.40:195,0,4	1/1:18,1:17:9.39:138,9,0	0/0:9,0:9:26.21:0,26,180	1/1:11,1:12:10.29:53,10,0	1/1:9,0:8:0.36:17,0,0	0/0:21,0:21:41.91:0,42,316	0/0:18,0:18:37.93:0,38,261	0/0:34,0:31:57.28:0,57,415	0/1:11,3:14:9.50:73,0,9	0/1:15,0:13:3.97:20,0,4	0/1:26,0:22:21.01:30,0,21	0/0:8,0:7:1.71:0,2,5	0/0:5,0:4:2.03:0,2,6	0/0:14,0:14:26:0,26,183	0/0:17,0:17:33.76:0,34,236	1/1:13,3:14:9.63:117,10,0	0/1:25,0:26:16.37:16,0,51	0/0:23,0:22:7.56:0,8,50	0/0:4,0:4:6.29:0,6,19
chr10	39300309	.	AAG	A	1185.79	PASS	AB=0.898;AC=14;AF=0.250;AN=56;BaseQRankSum=5.111;DP=668;FS=1.472;HRun=0;HaplotypeScore=110.7778;InbreedingCoeff=0.0261;MQ=36.83;MQ0=49;MQRankSum=-7.310;QD=3.99;ReadPosRankSum=-2.884;VQSLOD=2.2881;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:28:4.83:5,0,189	0/0:6,0:6:16.26:0,16,231	0/0:105,0:2:2.22:0,2,7	0/1:101,0:17:24.66:25,0,235	0/0:31,0:30:72.95:0,73,1016	0/0:15,0:15:41.71:0,42,592	0/0:15,0:13:14.86:0,15,320	0/1:12,7:18:63.93:228,0,64	0/0:15,0:15:39.03:0,39,568	0/0:35,0:30:62.80:0,63,536	0/0:20,0:18:28.41:0,28,248	0/0:9,0:9:26.30:0,26,389	1/1:12,0:12:18.91:110,19,0	0/1:11,0:10:42.38:42,0,55	0/0:20,0:19:47.83:0,48,770	0/0:17,0:16:29.69:0,30,580	0/0:35,0:32:51.78:0,52,965	0/0:14,0:14:33.55:0,34,308	0/1:17,2:16:99:104,0,121	0/1:20,3:19:99:100,0,112	0/1:4,1:4:19.41:47,0,19	0/0:5,0:4:6.01:0,6,61	0/0:13,0:13:34.26:0,34,483	0/0:16,0:16:39.40:0,39,534	0/1:17,0:15:20.78:85,0,21	0/1:25,5:30:99:232,0,188	0/1:17,7:23:47.42:266,0,47	1/1:4,2:5:9:103,9,0
chr10	39300334	.	A	AAAAG	4029.47	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=-1.947;DP=591;FS=1.359;HRun=0;HaplotypeScore=129.5574;InbreedingCoeff=0.6774;MQ=53.13;MQ0=21;MQRankSum=-1.234;QD=23.29;ReadPosRankSum=0.373;VQSLOD=3.6674;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:28:57.90:0,58,633	0/0:7,0:7:7.84:0,8,101	0/0:50,0:10:15.76:0,16,204	0/0:52,0:11:18.96:0,19,143	0/0:32,0:32:71.86:0,72,832	0/0:14,0:14:31.99:0,32,346	0/0:13,0:13:35.83:0,36,425	1/1:5,19:30:38.49:1073,38,0	0/0:13,0:13:27.05:0,27,402	0/0:31,0:29:58.73:0,59,769	0/0:23,0:21:54.13:0,54,679	0/0:13,0:13:35.99:0,36,382	0/1:11,0:11:16.81:17,0,36	1/1:9,0:8:0.83:18,1,0	0/0:19,0:18:41.94:0,42,482	0/0:19,0:18:47.90:0,48,568	0/0:38,0:37:95.26:0,95,1116	0/0:17,0:16:29.04:0,29,283	1/1:9,11:26:51.08:708,51,0	1/1:8,0:17:39.54:531,40,0	0/1:7,0:6:4.95:114,0,5	0/0:8,0:8:17.94:0,18,190	0/0:16,0:16:33.01:0,33,400	0/0:19,0:19:45.11:0,45,607	0/1:18,0:17:25.10:25,0,89	1/1:17,2:27:62.66:895,63,0	1/1:6,0:15:33.05:418,33,0	1/1:9,0:9:2.13:231,2,0
chr10	39301769	.	TG	T	1392.28	PASS	AB=0.888;AC=34;AF=0.607;AN=56;BaseQRankSum=4.844;DP=449;FS=2.688;HRun=12;HaplotypeScore=67.9733;InbreedingCoeff=0.4538;MQ=72.23;MQ0=0;MQRankSum=-0.634;QD=4.16;ReadPosRankSum=2.685;VQSLOD=0.8958;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:12,1:22:22.35:66,22,0	0/0:9,0:9:9.02:0,9,91	0/0:16,1:14:6.26:0,6,34	0/1:8,0:8:0.25:0,0,51	0/0:14,0:14:8.92:0,9,72	0/0:18,0:19:0.11:0,0,141	0/1:10,2:12:51.49:51,0,73	1/1:15,10:24:8.39:182,8,0	0/1:11,4:16:45.85:46,0,103	1/1:13,0:20:14.68:44,15,0	1/1:13,0:19:8.32:25,8,0	0/0:15,0:15:18.01:0,18,175	1/1:3,0:14:18.33:54,18,0	1/1:7,0:22:30.54:90,31,0	0/1:19,0:19:7.70:8,0,85	0/1:13,3:16:29.92:30,0,232	0/0:21,0:21:30.04:0,30,292	1/1:1,0:11:18.33:53,18,0	1/1:7,9:17:25.90:191,26,0	1/1:11,5:16:17.85:134,18,0	1/1:8,12:20:23.87:183,24,0	0/0:9,0:9:3.01:0,3,30	0/0:10,0:10:3.01:0,3,31	0/1:11,1:13:5.24:5,0,112	1/1:8,1:19:21.03:60,21,0	1/1:12,6:19:10.96:76,11,0	1/1:6,12:18:26.87:209,27,0	1/1:2,5:7:8.97:70,9,0
chr10	39303144	.	GCGTGTGTGTGTGTGTGTGTGTGTGTGT	G	1628.27	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=3.235;DP=426;FS=3.006;HRun=0;HaplotypeScore=279.2127;InbreedingCoeff=0.8276;MQ=53.92;MQ0=6;MQRankSum=-3.075;QD=162.83;ReadPosRankSum=1.524;VQSLOD=3.0958;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:33.58:0,34,1040	0/0:5,0:5:9.03:0,9,784	0/0:24,0:11:14.90:0,15,1291	0/0:26,0:20:53.76:0,54,2826	0/0:12,0:12:28.99:0,29,1712	0/0:9,0:9:15.05:0,15,1250	0/0:28,0:27:54.17:0,54,3678	0/0:15,0:15:42.14:0,42,2064	0/0:25,0:25:58.08:0,58,5589	0/0:4,0:4:12.04:0,12,377	0/0:4,0:4:12.04:0,12,307	0/0:20,0:20:57.20:0,57,5196	1/1:0,4:4:9.03:656,9,0	1/1:0,5:5:12.04:875,12,0	0/0:18,0:18:39.59:0,40,3532	0/0:14,0:14:27.56:0,28,2594	0/0:28,0:28:51.16:0,51,3854	0/0:5,0:5:12.04:0,12,473	0/0:17,0:16:39.13:0,39,2017	0/0:9,0:9:21.07:0,21,978	0/0:36,0:36:61.31:0,61,3095	0/0:18,0:18:49.79:0,50,2690	0/0:8,0:8:17.93:0,18,1097	0/0:36,0:36:53.79:0,54,4155	1/1:0,1:1:3.01:219,3,0	0/0:18,0:18:54.17:0,54,2794	0/0:12,0:12:36.12:0,36,2012	0/0:6,0:5:15.05:0,15,907
chr10	39303145	.	C	CGTGTGT	4341	PASS	AB=0.609;AC=23;AF=0.442;AN=52;BaseQRankSum=-8.422;DP=451;FS=5.361;HRun=0;HaplotypeScore=139.2545;InbreedingCoeff=0.6473;MQ=54.01;MQ0=7;MQRankSum=0.427;QD=17.50;ReadPosRankSum=0.029;VQSLOD=4.1766;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:16:5.57:0,6,53	1/1:5,0:5:2.88:34,3,0	./.	0/0:26,0:20:3:0,3,31	1/1:7,3:15:3.01:97,3,0	1/1:3,5:11:9.03:272,9,0	1/1:22,0:33:9.03:235,9,0	0/0:16,0:15:1.82:0,2,5	0/1:9,13:28:5.74:875,0,6	0/0:5,0:5:3.01:0,3,42	./.	1/1:15,4:21:33.10:767,33,0	0/0:4,0:4:9.03:0,9,126	0/0:5,0:5:12.04:0,12,168	1/1:12,4:20:15.52:311,16,0	1/1:5,9:18:18.06:526,18,0	1/1:12,2:30:18.53:350,19,0	0/0:5,0:5:6.02:0,6,84	0/0:17,0:16:13.59:0,14,171	0/0:9,0:9:12.04:0,12,162	0/0:35,0:35:0.47:0,0,1	1/1:6,10:19:15.05:326,15,0	1/1:4,3:8:2.31:63,2,0	1/1:19,13:39:24.08:485,24,0	0/0:1,0:1:3.01:0,3,40	0/0:17,0:17:21.06:0,21,292	0/0:12,0:12:16.60:0,17,185	0/0:6,0:5:12.04:0,12,167
chr10	39303158	.	GTGTGTGTGTGT	G	1083.04	PASS	AB=1.000;AC=18;AF=0.321;AN=56;BaseQRankSum=9.121;DP=429;FS=3.383;HRun=0;HaplotypeScore=166.5405;InbreedingCoeff=0.4354;MQ=53.21;MQ0=10;MQRankSum=-8.131;QD=12.59;ReadPosRankSum=6.398;VQSLOD=2.3233;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:3,1:4:6.91:195,7,0	0/0:6,0:6:12.04:0,12,376	0/0:30,0:8:24.06:0,24,631	0/0:24,0:18:44.36:0,44,1083	0/0:17,0:17:28.99:0,29,744	0/0:12,0:12:18.06:0,18,608	0/0:32,0:31:45.15:0,45,1393	0/0:22,0:21:48.65:0,49,762	0/0:25,0:25:48.64:0,49,2225	1/1:0,2:2:3.01:106,3,0	0/1:1,0:1:0:0,0,0	0/0:18,0:18:51.17:0,51,2266	1/1:4,0:4:8.86:230,9,0	1/1:5,0:5:12.04:308,12,0	0/0:17,0:17:31.66:0,32,1517	0/0:15,0:15:21.07:0,21,982	0/0:29,0:29:37.63:0,38,1402	1/1:1,3:4:6.49:206,6,0	0/1:17,0:16:13.61:14,0,373	0/1:10,0:9:23.97:24,0,91	0/0:38,0:38:38.23:0,38,329	0/0:16,0:16:40.76:0,41,1076	0/0:5,0:5:9.03:0,9,367	0/0:36,0:36:41.58:0,42,1754	1/1:1,0:1:3.01:77,3,0	0/1:17,0:17:33.14:33,0,341	0/1:14,0:14:29.79:30,0,260	0/1:6,0:5:24.86:32,0,25
chr10	39303164	.	GTGTGTGTGT	G	2758.16	PASS	AB=0.812;AC=25;AF=0.446;AN=56;BaseQRankSum=6.607;DP=400;FS=1.987;HRun=0;HaplotypeScore=145.7770;InbreedingCoeff=0.6441;MQ=56.26;MQ0=10;MQRankSum=-5.556;QD=22.24;ReadPosRankSum=2.941;VQSLOD=2.8155;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:3:6.02:141,6,0	0/0:6,0:6:12.04:0,12,285	0/0:29,0:10:29.98:0,30,602	0/0:26,0:19:48.07:0,48,927	0/0:15,0:15:25.98:0,26,587	0/0:13,0:13:21.07:0,21,555	0/0:30,0:29:39.13:0,39,1113	0/1:18,1:18:34.31:149,0,34	0/0:24,0:24:45.63:0,46,1806	1/1:2,0:2:3.01:70,3,0	1/1:1,0:1:2.98:22,3,0	0/0:17,0:17:45.15:0,45,1829	1/1:4,0:4:9.03:201,9,0	1/1:5,0:5:12.04:267,12,0	0/0:17,0:17:34.36:0,34,1297	0/0:14,0:14:18.06:0,18,789	0/0:30,0:30:37.37:0,37,1162	1/1:5,0:4:8.62:148,9,0	0/1:9,4:12:22.53:261,0,23	1/1:3,5:7:13.40:271,13,0	1/1:26,2:28:14.94:175,15,0	0/0:15,0:15:37.75:0,38,884	0/0:4,0:4:6.02:0,6,281	0/0:36,0:36:44.31:0,44,1510	1/1:1,0:1:3.01:67,3,0	0/1:11,7:18:12.88:465,0,13	1/1:4,7:11:20.19:457,20,0	1/1:1,4:4:12.04:265,12,0
chr10	39303172	.	GT	G	378.85	PASS	AB=0.954;AC=23;AF=0.411;AN=56;BaseQRankSum=8.623;DP=392;FS=2.093;HRun=1;HaplotypeScore=117.8889;InbreedingCoeff=0.6252;MQ=61.18;MQ0=7;MQRankSum=-3.401;QD=3.57;ReadPosRankSum=3.865;VQSLOD=0.6079;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,0:4:6.21:30,6,0	0/0:5,0:5:8.53:0,9,86	0/0:23,0:11:33.08:0,33,409	0/0:24,0:19:24.85:0,25,546	0/0:15,0:15:24.72:0,25,247	0/0:13,0:13:24.07:0,24,288	0/0:29,0:28:36.09:0,36,429	0/1:18,2:19:33.27:33,0,35	0/0:20,0:20:37.87:0,38,352	1/1:2,0:2:2.84:14,3,0	1/1:2,0:2:2.98:22,3,0	0/0:18,0:18:51.11:0,51,590	1/1:3,0:3:8.04:33,8,0	1/1:6,0:5:10.71:44,11,0	0/0:16,0:16:30.54:0,31,359	0/0:15,0:15:21.01:0,21,191	0/0:29,0:29:30.54:0,31,338	1/1:5,0:4:8.49:42,8,0	0/1:14,0:14:26.81:27,0,37	1/1:10,0:9:16.18:74,16,0	0/0:22,0:22:2.57:0,3,10	0/0:14,0:14:32.85:0,33,240	0/0:6,0:6:12.02:0,12,133	0/0:37,0:37:45.56:0,46,487	1/1:2,0:2:5.68:36,6,0	0/1:19,1:20:27.14:58,0,27	1/1:12,0:12:19.46:84,19,0	1/1:4,1:5:14.40:79,14,0
chr10	39303178	.	G	GGGGA	4939.94	PASS	AB=1.000;AC=24;AF=0.429;AN=56;BaseQRankSum=3.231;DP=404;FS=4.870;HRun=0;HaplotypeScore=132.8400;InbreedingCoeff=0.4395;MQ=78.33;MQ0=7;MQRankSum=-5.696;QD=24.95;ReadPosRankSum=0.386;VQSLOD=4.3354;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:13,0:12:5.05:104,0,5	0/0:3,0:3:9.01:0,9,142	0/0:28,0:16:40.75:0,41,595	0/0:31,0:26:61.65:0,62,985	0/0:11,0:11:14.09:0,14,175	0/0:14,0:14:19.87:0,20,331	0/0:19,0:19:25.53:0,26,452	1/1:23,0:24:69.18:1419,69,0	0/1:15,0:16:47.11:47,0,54	1/1:6,0:6:3.84:71,4,0	1/1:6,0:5:5.33:27,5,0	0/0:16,0:16:15.97:0,16,362	0/1:5,0:5:8.72:9,0,47	0/1:8,0:7:29.39:47,0,29	0/1:10,0:10:1.82:2,0,170	0/0:12,0:12:3.56:0,4,64	0/0:24,0:24:25.10:0,25,319	0/1:7,0:6:7.23:57,0,7	1/1:1,9:17:48.07:733,48,0	1/1:5,0:9:27.06:445,27,0	0/0:0,22:27:0.29:0,0,1	0/0:16,0:16:13.36:0,13,133	0/0:5,0:5:12:0,12,167	0/1:29,0:29:1.83:2,0,362	0/1:4,0:4:1.03:58,0,1	1/1:14,0:22:66.11:1043,66,0	1/1:8,0:15:45.06:707,45,0	1/1:1,0:5:14.82:169,15,0
chr10	39303300	.	G	GGA	1289.93	PASS	AB=0.900;AC=14;AF=0.250;AN=56;BaseQRankSum=-3.123;DP=267;FS=8.239;HRun=0;HaplotypeScore=47.0166;InbreedingCoeff=0.6204;MQ=74.44;MQ0=2;MQRankSum=-0.375;QD=14.02;ReadPosRankSum=-1.860;VQSLOD=1.6713;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:10:8.52:0,9,42	0/0:7,0:7:11.90:0,12,109	0/0:25,0:17:16.85:0,17,159	0/0:31,0:18:21:0,21,214	0/0:8,0:8:12.04:0,12,144	0/0:2,0:2:6.02:0,6,72	0/0:7,0:8:14.67:0,15,135	1/1:17,12:30:9.43:509,9,0	0/0:8,0:8:9.03:0,9,108	0/0:4,0:7:11.02:0,11,51	0/0:1,0:1:0:0,0,0	0/0:8,0:8:17.78:0,18,181	0/0:4,0:4:6.02:0,6,72	0/0:4,0:4:2.84:0,3,14	0/0:4,0:4:9.03:0,9,107	0/0:5,0:5:9.03:0,9,108	0/0:6,0:6:11.62:0,12,118	0/1:4,0:5:5.19:33,0,5	0/1:6,2:8:3.78:176,0,4	1/1:2,1:3:6.01:74,6,0	1/1:20,9:29:21.06:309,21,0	0/0:9,0:9:12.02:0,12,132	0/0:9,0:9:18.06:0,18,216	0/0:9,0:9:18.06:0,18,215	0/0:9,0:9:9.03:0,9,105	1/1:8,3:11:15.04:219,15,0	1/1:4,0:4:6.02:89,6,0	1/1:0,1:1:3.01:48,3,0
chr10	39303334	.	AGGGCG	A	487.49	PASS	AB=1.000;AC=18;AF=0.360;AN=50;BaseQRankSum=0.277;DP=179;FS=3.796;HRun=0;HaplotypeScore=41.5826;InbreedingCoeff=0.4765;MQ=84.95;MQ0=7;MQRankSum=-1.617;QD=7.99;ReadPosRankSum=0.332;VQSLOD=1.4846;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:4:2.80:0,3,13	0/0:2,0:2:2.97:0,3,21	0/0:25,0:11:5.20:0,5,110	0/0:35,0:12:2.72:0,3,80	./.	1/1:3,0:3:2.04:6,2,0	0/0:3,0:3:5.94:0,6,41	1/1:9,2:11:10.23:121,10,0	0/0:4,0:4:2.05:0,2,39	0/0:3,0:3:2.12:0,2,15	./.	0/0:5,0:5:7.26:0,7,52	1/1:5,0:4:0.47:1,0,0	./.	0/0:2,0:2:2.92:0,3,17	0/0:4,0:4:9.31:0,9,79	0/0:7,0:7:6.47:0,6,69	0/0:4,0:4:4.78:0,5,18	1/1:4,4:7:12.02:159,12,0	1/1:0,1:1:3.01:52,3,0	1/1:12,6:18:5.82:75,6,0	0/0:1,0:1:0.47:0,0,1	0/0:6,0:6:8.97:0,9,76	0/0:7,0:7:5.40:0,5,52	0/1:4,0:4:0.01:0,0,0	1/1:3,2:5:6.91:107,7,0	1/1:0,4:4:6.02:105,6,0	0/1:2,0:2:0:0,0,0
chr10	39303337	.	GC	G	326.90	PASS	AB=1.000;AC=32;AF=0.593;AN=54;BaseQRankSum=0.055;DP=162;FS=3.454;HRun=1;HaplotypeScore=30.2109;InbreedingCoeff=0.2245;MQ=88.22;MQ0=6;MQRankSum=-2.545;QD=3.03;ReadPosRankSum=0.951;VQSLOD=-0.2737;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:1,3:4:5.02:0,5,20	0/0:1,0:1:2.98:0,3,21	0/1:25,0:10:2.67:3,0,45	0/0:33,1:11:0.01:0,0,54	0/1:3,0:2:0:0,0,0	1/1:2,0:2:2.74:12,3,0	0/0:3,0:3:5.94:0,6,41	1/1:10,0:10:7.66:33,8,0	0/1:5,0:5:5.61:57,0,6	1/1:2,0:2:1.25:3,1,0	./.	0/1:6,0:6:18.39:45,0,18	1/1:4,0:3:2.60:10,3,0	1/1:3,0:3:3:26,3,0	1/1:1,0:1:2.88:15,3,0	0/0:3,1:4:9.27:0,9,57	0/1:6,0:6:11.12:50,0,11	0/0:4,0:4:4.81:0,5,19	1/1:4,0:4:8.49:46,8,0	1/1:1,0:1:2.92:17,3,0	1/1:13,0:13:5.86:41,6,0	1/1:2,0:2:2.56:23,3,0	0/0:4,0:4:8.80:0,9,58	0/1:7,0:7:23.94:37,0,24	0/1:4,0:4:0:0,0,0	1/1:3,0:3:5.62:27,6,0	1/1:4,0:4:5.49:23,5,0	0/1:2,0:2:0:0,0,0
chr10	39303698	.	CGTCGTAGCT	C	2416.87	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=8.009;DP=341;FS=4.853;HRun=0;HaplotypeScore=92.8057;InbreedingCoeff=0.8749;MQ=83.61;MQ0=0;MQRankSum=-0.385;QD=29.12;ReadPosRankSum=-6.344;VQSLOD=0.5264;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:48.08:0,48,1644	0/0:8,0:8:24.05:0,24,759	0/0:12,0:12:30.07:0,30,911	0/0:10,0:10:20.23:0,20,642	0/0:4,0:4:9.03:0,9,424	0/0:4,0:4:12.01:0,12,150	0/0:39,0:39:99:0,114,5072	1/1:0,22:22:56.45:568,56,0	0/0:5,0:5:12.04:0,12,595	0/0:8,0:8:24.07:0,24,638	0/0:3,0:3:9.03:0,9,346	0/0:14,0:14:42.14:0,42,1598	0/0:15,0:15:39.02:0,39,1387	0/0:11,0:11:30.10:0,30,1386	0/0:10,0:10:30.08:0,30,1109	0/0:6,0:6:18.05:0,18,670	0/0:27,0:27:81.22:0,81,3579	0/0:26,0:26:78.24:0,78,3334	1/1:0,11:11:32.56:425,33,0	1/1:0,3:3:8.94:134,9,0	1/1:21,1:22:41.43:418,41,0	0/0:6,0:6:12.04:0,12,269	0/0:3,0:3:2.45:0,2,24	0/0:23,0:23:69.20:0,69,2912	0/0:7,0:7:15.04:0,15,440	1/1:2,13:15:32.50:589,32,0	1/1:0,8:8:12.04:375,12,0	1/1:0,2:2:3.01:94,3,0
chr10	39304206	.	GA	G	4004.23	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=9.881;DP=582;FS=5.020;HRun=1;HaplotypeScore=55.7407;InbreedingCoeff=0.9984;MQ=78.73;MQ0=0;MQRankSum=-0.575;QD=36.40;ReadPosRankSum=0.262;VQSLOD=3.7625;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,44:45:99:1677,120,0	0/0:8,0:8:24.08:0,24,384	0/0:9,0:9:24.05:0,24,357	0/0:23,0:23:31.74:0,32,814	0/0:18,0:18:54.18:0,54,863	0/0:20,0:20:60.19:0,60,929	0/0:19,0:19:57.18:0,57,887	0/0:31,0:31:90.31:0,90,1439	0/0:20,0:20:60.19:0,60,925	1/1:0,20:20:60.20:835,60,0	1/1:0,14:14:27.09:359,27,0	0/0:16,0:16:48.16:0,48,767	0/0:14,0:14:39.13:0,39,620	0/0:13,0:13:39.13:0,39,623	0/0:24,0:24:69.24:0,69,1094	0/0:22,0:22:66.23:0,66,1051	0/0:18,0:18:54.18:0,54,842	1/1:0,31:31:81.27:1133,81,0	0/0:23,0:23:69.24:0,69,1097	0/0:13,0:13:36.12:0,36,575	0/0:34,0:34:99:0,102,1626	0/0:18,0:18:51.17:0,51,815	0/0:18,0:18:54.18:0,54,839	0/0:19,0:19:54.18:0,54,860	0/0:22,0:22:66.23:0,66,1052	0/0:19,0:19:57.19:0,57,911	0/0:37,0:37:99:0,108,1697	0/0:14,0:14:39.13:0,39,620
chr10	39304358	.	CTG	C	194.16	PASS	AB=0.964;AC=17;AF=0.340;AN=50;BaseQRankSum=-0.347;DP=466;FS=0.969;HRun=0;HaplotypeScore=76.5583;InbreedingCoeff=0.0548;MQ=60.16;MQ0=6;MQRankSum=-0.316;QD=0.89;ReadPosRankSum=2.336;VQSLOD=1.3768;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:32:11.44:0,11,117	0/0:7,0:7:5.98:0,6,64	./.	./.	0/1:11,0:10:12.17:12,0,118	0/0:16,0:15:11.98:0,12,100	0/0:14,0:18:2.98:0,3,25	./.	0/1:12,0:12:14.25:14,0,34	0/0:21,0:21:11.96:0,12,108	0/0:11,0:11:11.68:0,12,85	0/0:8,0:8:8.77:0,9,88	0/0:17,0:16:12.47:0,12,114	0/0:18,0:18:14.98:0,15,124	0/1:12,3:15:17.42:17,0,100	0/1:12,0:12:17.38:17,0,142	0/1:15,1:17:36.27:36,0,235	0/0:19,0:17:11.97:0,12,125	1/1:17,0:16:2.92:17,3,0	1/1:19,0:19:5.93:41,6,0	1/1:27,0:27:5.53:39,6,0	0/1:20,0:20:33.23:33,0,66	0/0:10,0:9:5.81:0,6,57	0/1:20,0:19:1.05:1,0,335	0/0:15,0:15:8.96:0,9,134	0/1:23,0:23:7.24:76,0,7	0/1:15,0:16:8.01:21,0,8	1/1:3,6:9:2.88:15,3,0
chr10	39304416	.	GAGAC	G	660.08	PASS	AB=0.979;AC=13;AF=0.241;AN=54;BaseQRankSum=7.005;DP=531;FS=1.198;HRun=0;HaplotypeScore=112.4253;InbreedingCoeff=0.0545;MQ=40.62;MQ0=41;MQRankSum=-5.329;QD=3.30;ReadPosRankSum=-4.134;VQSLOD=0.9968;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:21:0.11:0,0,1	0/0:7,0:7:13.73:0,14,289	0/0:14,0:3:6.02:0,6,94	0/0:42,0:12:7.34:0,7,350	0/0:19,0:19:32.58:0,33,681	0/0:20,0:19:0.33:0,0,638	0/0:16,0:14:8.92:0,9,215	0/1:27,0:18:69.44:69,0,329	0/0:14,0:11:8.94:0,9,171	0/1:11,0:10:41.73:67,0,42	1/1:12,0:10:0.47:1,0,0	0/0:9,0:8:5.36:0,5,299	0/1:22,0:20:11.18:99,0,11	1/1:20,0:17:7.99:31,8,0	0/0:21,0:20:18.12:0,18,700	0/0:16,0:16:33.10:0,33,631	0/0:18,0:17:24.40:0,24,773	0/1:14,0:12:18.12:114,0,18	0/1:11,1:11:83.49:83,0,170	1/1:22,1:20:3.32:20,3,0	./.	0/0:17,0:14:5.75:0,6,55	0/0:15,0:15:20.53:0,21,391	0/0:32,0:23:26.18:0,26,994	0/0:17,0:16:5.48:0,5,527	0/1:33,0:31:99:194,0,371	0/1:24,2:21:67.61:121,0,68	0/0:14,0:12:3.90:0,4,114
chr10	39304418	.	GAC	G	962.53	PASS	AB=0.902;AC=18;AF=0.333;AN=54;BaseQRankSum=5.623;DP=532;FS=1.204;HRun=0;HaplotypeScore=101.4256;InbreedingCoeff=0.1166;MQ=39.84;MQ0=45;MQRankSum=-5.442;QD=3.67;ReadPosRankSum=-4.360;VQSLOD=0.8531;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,2:21:0.89:0,1,1	0/0:5,2:7:9.57:0,10,194	0/0:16,0:3:5.85:0,6,49	0/0:47,0:12:7.28:0,7,205	0/0:21,0:20:32.45:0,32,459	0/1:20,0:19:9.46:9,0,402	0/0:15,1:14:9.03:0,9,141	0/1:20,7:18:99:223,0,182	0/0:14,0:11:8.92:0,9,119	0/1:10,0:9:0.70:1,0,42	1/1:11,0:9:0.47:1,0,0	0/0:9,0:8:4.89:0,5,197	1/1:12,9:19:21.82:213,22,0	1/1:16,4:16:8.68:40,9,0	0/0:21,0:19:17.98:0,18,435	0/0:16,0:16:29.92:0,30,382	0/0:18,0:17:15.02:0,15,494	0/1:14,0:12:4.67:37,0,5	0/1:10,2:11:99:112,0,112	1/1:21,3:21:3.41:19,3,0	./.	0/1:17,0:14:3.93:4,0,36	0/0:15,0:15:17.41:0,17,225	0/0:31,0:22:26.16:0,26,692	0/1:15,1:15:1.01:1,0,329	0/1:24,7:29:99:308,0,214	0/1:15,11:21:69:133,0,69	0/1:11,1:10:8.03:8,0,70
chr10	39304428	.	CAG	C	259.33	PASS	AB=0.778;AC=10;AF=0.192;AN=52;BaseQRankSum=4.253;DP=548;FS=4.839;HRun=0;HaplotypeScore=104.2414;InbreedingCoeff=0.4479;MQ=38.00;MQ0=49;MQRankSum=-6.251;QD=2.07;ReadPosRankSum=-2.431;VQSLOD=1.4388;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:5,16:19:2.03:7,2,0	0/0:8,0:8:15.72:0,16,179	0/0:26,0:3:7.27:0,7,97	0/0:69,0:13:18.18:0,18,250	0/0:19,0:16:27.09:0,27,394	0/0:16,0:15:30.10:0,30,449	0/0:17,0:13:9.03:0,9,146	0/0:24,0:18:44.85:0,45,525	0/0:14,0:12:9.03:0,9,139	1/1:6,6:12:18.73:183,19,0	0/1:4,0:9:0:0,0,0	0/0:11,0:10:17.22:0,17,234	0/1:17,1:15:25.97:26,0,66	0/1:20,1:15:3.82:32,0,4	0/0:21,0:19:33.04:0,33,487	0/0:16,0:16:27.05:0,27,373	0/0:15,0:15:30.01:0,30,415	0/1:4,8:11:14.29:134,0,14	0/0:14,0:13:16.43:0,16,285	1/1:26,0:23:1.75:4,2,0	./.	./.	0/0:15,0:15:21.04:0,21,300	0/0:30,0:22:50.47:0,50,654	0/0:14,0:14:27.02:0,27,444	0/0:30,0:26:48.41:0,48,692	0/0:24,0:19:21.27:0,21,151	0/0:12,0:10:6.02:0,6,105
chr10	39304438	.	GAC	G	1847.70	PASS	AB=0.994;AC=26;AF=0.500;AN=52;BaseQRankSum=-4.311;DP=537;FS=5.588;HRun=0;HaplotypeScore=96.2817;InbreedingCoeff=0.2809;MQ=37.93;MQ0=43;MQRankSum=6.267;QD=6.53;ReadPosRankSum=3.571;VQSLOD=2.8179;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:22:5.73:0,6,35	1/1:8,0:8:20.64:148,21,0	0/0:26,0:3:4.94:0,5,54	0/0:69,0:13:5.72:0,6,53	1/1:18,0:14:26.71:213,27,0	1/1:16,0:14:29.96:245,30,0	1/1:17,0:11:8.96:74,9,0	0/0:25,0:18:23.45:0,23,142	1/1:4,11:14:2.92:39,3,0	0/1:14,0:13:56.69:57,0,67	0/1:11,0:10:0.16:0,0,0	0/1:12,0:11:12.47:69,0,12	0/0:19,0:16:11.32:0,11,103	0/1:20,0:14:13.29:13,0,29	1/1:22,0:17:6.37:164,6,0	1/1:17,0:17:23.96:196,24,0	0/1:17,0:17:5.40:231,0,5	1/1:10,0:10:3.48:77,3,0	0/0:13,0:12:8.75:0,9,129	0/0:14,0:20:1.55:0,2,4	./.	./.	1/1:9,0:9:14.98:124,15,0	0/1:27,0:21:17.77:259,0,18	0/0:16,0:15:23.48:0,23,187	0/1:29,0:24:73.19:73,0,145	0/1:20,0:13:33.01:33,0,40	0/0:11,0:9:7.46:0,7,42
chr10	39304446	.	CACAG	C	1742.20	PASS	AB=1.000;AC=25;AF=0.481;AN=52;BaseQRankSum=-3.447;DP=531;FS=4.421;HRun=0;HaplotypeScore=103.2273;InbreedingCoeff=0.0810;MQ=37.57;MQ0=45;MQRankSum=6.351;QD=5.99;ReadPosRankSum=1.523;VQSLOD=2.1929;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:22:2.66:0,3,12	1/1:8,0:8:20.64:148,21,0	0/0:24,0:3:4.94:0,5,54	0/0:60,0:9:6.19:0,6,53	1/1:19,1:16:5.58:189,6,0	1/1:17,0:13:29.96:245,30,0	0/1:18,0:12:31.95:39,0,32	0/0:20,0:10:20.89:0,21,114	0/0:14,0:13:1.73:0,2,5	0/1:14,0:13:31.60:61,0,32	1/1:15,0:12:2.54:15,3,0	0/1:13,0:12:27.25:27,0,124	0/0:18,0:15:22.02:0,22,165	0/0:22,0:15:9.95:0,10,84	0/1:20,0:14:19.75:158,0,20	1/1:15,0:16:23.97:228,24,0	0/1:17,0:17:86.49:189,0,86	1/1:10,0:10:0.43:53,0,0	0/0:13,0:12:2.28:0,2,122	1/1:22,0:19:2.77:15,3,0	./.	./.	1/1:9,0:8:14.98:124,15,0	0/1:27,0:22:85.40:288,0,85	0/0:15,0:14:2.57:0,3,156	0/1:29,0:24:98.67:99,0,134	0/1:23,0:13:22.40:22,0,42	0/1:13,0:10:1.62:2,0,29
chr10	39304448	.	CAGAGAG	C	417.71	PASS	AB=0.879;AC=15;AF=0.313;AN=48;BaseQRankSum=2.663;DP=539;FS=10.851;HRun=0;HaplotypeScore=118.4809;InbreedingCoeff=0.2692;MQ=37.15;MQ0=44;MQRankSum=-1.519;QD=2.44;ReadPosRankSum=1.315;VQSLOD=1.8833;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:22:0.39:9,0,0	0/0:8,0:8:3.47:0,3,26	./.	0/0:60,0:9:0.47:0,0,1	0/0:19,0:15:3.48:0,3,74	0/0:17,0:13:0:0,0,0	0/0:18,0:12:6.02:0,6,158	0/0:29,0:15:14.62:0,15,90	0/0:13,0:12:2.93:0,3,56	./.	1/1:13,0:10:2.67:58,3,0	0/0:14,0:13:12.51:0,13,293	0/0:19,0:16:6.96:0,7,145	0/0:21,0:15:12.51:0,13,283	0/0:19,0:13:3.01:0,3,96	0/0:17,0:17:5.48:0,5,32	0/0:17,0:17:18.03:0,18,379	1/1:10,0:10:5.38:40,5,0	0/1:15,2:14:23.85:54,0,24	1/1:18,3:19:2.77:58,3,0	./.	./.	0/0:9,0:8:2.99:0,3,24	0/0:26,0:22:17.09:0,17,394	1/1:12,3:14:3.38:20,3,0	0/1:24,1:24:36.42:216,0,36	0/1:21,2:14:30.14:54,0,30	1/1:11,0:10:3.01:42,3,0
chr10	39304503	.	A	AC	486.77	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=7.936;DP=518;FS=1.971;HRun=0;HaplotypeScore=87.1368;InbreedingCoeff=0.8335;MQ=54.27;MQ0=25;MQRankSum=-0.599;QD=7.27;ReadPosRankSum=-1.007;VQSLOD=3.4928;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:25,1:22:41.47:267,41,0	0/0:7,0:6:12.02:0,12,167	0/0:26,0:16:45.14:0,45,609	0/0:24,0:15:45.15:0,45,613	0/0:21,0:21:45.60:0,46,590	0/0:13,0:11:26.54:0,27,322	0/0:21,0:20:47.94:0,48,625	0/0:33,0:31:93.16:0,93,1229	0/0:20,0:18:30.10:0,30,414	0/1:11,0:10:12.72:67,0,13	1/1:15,2:17:40.34:227,40,0	0/0:17,0:15:36.09:0,36,478	0/0:14,0:11:29.76:0,30,372	0/0:17,0:15:38.97:0,39,446	0/0:15,0:14:41.97:0,42,503	0/0:14,0:14:36.12:0,36,481	0/0:11,0:11:32.58:0,33,396	1/1:10,3:13:18.17:74,18,0	0/0:20,0:18:51.15:0,51,683	0/0:17,0:16:48.06:0,48,606	0/0:12,0:12:30.01:0,30,374	0/0:16,0:16:35.48:0,35,426	0/0:17,0:16:42.13:0,42,583	0/0:24,0:21:54.18:0,54,741	0/0:22,0:21:59.91:0,60,722	0/0:27,0:25:72.14:0,72,896	0/0:21,0:14:27.07:0,27,358	0/0:22,0:22:63.19:0,63,858
chr10	39307164	.	G	GA	4157.60	PASS	AB=1.000;AC=28;AF=0.500;AN=56;BaseQRankSum=-5.724;DP=270;FS=1.783;HRun=6;HaplotypeScore=39.8247;InbreedingCoeff=0.7679;MQ=79.71;MQ0=2;MQRankSum=-1.150;QD=23.89;ReadPosRankSum=0.782;VQSLOD=2.5628;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,18:19:42.13:528,42,0	0/0:6,0:6:15.03:0,15,153	0/1:20,0:12:5.92:6,0,117	0/1:19,0:12:32.15:32,0,81	0/0:9,0:9:24.05:0,24,244	0/0:8,0:8:21.05:0,21,214	0/0:5,0:5:12.01:0,12,115	1/1:3,31:34:93.28:1157,93,0	0/0:5,0:5:9.02:0,9,92	1/1:1,6:7:18.06:226,18,0	1/1:2,7:9:21.07:264,21,0	0/0:5,0:5:15.01:0,15,139	1/1:1,3:4:9.03:113,9,0	1/1:0,5:5:15.05:189,15,0	0/0:5,0:5:15.03:0,15,153	0/0:4,0:4:9.01:0,9,85	0/0:26,0:26:66.14:0,66,673	1/1:1,9:10:27.09:340,27,0	1/1:2,6:8:18.06:226,18,0	1/1:3,3:6:15.01:171,15,0	1/1:0,1:1:3.01:38,3,0	0/0:3,0:3:3.01:0,3,31	0/0:5,0:5:15.03:0,15,153	0/0:3,0:3:9.02:0,9,91	0/0:12,0:12:30.06:0,30,306	1/1:2,5:7:15.05:189,15,0	1/1:2,6:7:18.06:226,18,0	1/1:3,13:16:36.12:453,36,0
chr10	39307199	.	A	AGTAT	2686.39	PASS	AB=0.536;AC=13;AF=0.232;AN=56;BaseQRankSum=3.888;DP=273;FS=3.613;HRun=0;HaplotypeScore=60.7616;InbreedingCoeff=0.6773;MQ=60.90;MQ0=4;MQRankSum=-4.786;QD=27.14;ReadPosRankSum=-2.200;VQSLOD=2.3167;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:11:3:0,3,28	0/0:8,0:8:21.05:0,21,310	0/0:11,0:3:6:0,6,70	0/0:10,0:5:2.60:0,3,47	0/0:11,0:11:27.06:0,27,403	0/0:10,0:10:18.03:0,18,240	0/0:10,0:10:24.04:0,24,351	1/1:42,0:40:41.89:467,42,0	0/0:5,0:5:15.05:0,15,238	0/0:2,0:6:12.01:0,12,112	0/0:3,0:8:6.01:0,6,56	0/0:0,0:10:27.03:0,27,252	0/0:6,0:6:15.05:0,15,238	0/0:7,0:7:15.05:0,15,238	0/0:7,0:7:15.05:0,15,238	0/0:1,0:1:3.01:0,3,48	0/0:23,0:23:36.06:0,36,498	0/0:6,0:8:6.01:0,6,56	1/1:6,1:6:9.02:170,9,0	1/1:2,9:11:4.44:664,4,0	1/1:3,0:3:9.03:165,9,0	0/0:3,0:3:9.03:0,9,143	0/0:2,0:4:2.48:0,2,46	0/0:1,0:3:6.01:0,6,56	0/0:12,0:12:30.08:0,30,442	1/1:0,6:6:18.06:425,18,0	0/1:2,12:14:1.58:538,0,2	1/1:14,1:15:24.03:428,24,0
chr10	39307322	.	A	AT	2215.36	PASS	AB=0.600;AC=13;AF=0.232;AN=56;BaseQRankSum=-7.699;DP=351;FS=16.425;HRun=9;HaplotypeScore=36.6384;InbreedingCoeff=0.8351;MQ=78.88;MQ0=0;MQRankSum=-2.467;QD=20.90;ReadPosRankSum=-2.701;VQSLOD=1.6738;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:77.94:0,78,672	0/0:3,0:3:6:0,6,52	0/0:12,0:12:23.97:0,24,205	0/0:9,0:9:5.95:0,6,45	0/0:10,0:10:26.98:0,27,234	0/0:20,0:20:27.47:0,27,393	0/0:13,0:13:32.99:0,33,287	1/1:9,31:41:87.05:933,87,0	0/0:11,0:11:32.98:0,33,283	0/0:15,0:15:41.99:0,42,365	0/0:3,0:3:6:0,6,52	0/0:11,0:11:32.99:0,33,286	0/0:7,0:7:14.26:0,14,73	0/0:10,0:10:25.90:0,26,139	0/0:9,0:9:23.99:0,24,208	0/0:13,0:13:35.99:0,36,313	0/0:19,0:20:59:0,59,496	0/0:10,0:10:29.99:0,30,260	1/1:3,15:18:42.06:443,42,0	0/1:2,4:6:11.01:118,0,11	1/1:0,10:11:26.91:280,27,0	0/0:6,0:6:11.98:0,12,104	0/0:8,0:8:17.99:0,18,156	0/0:12,0:12:26.98:0,27,234	0/0:13,0:13:32.99:0,33,287	1/1:3,7:10:17.99:176,18,0	1/1:1,7:8:15.04:166,15,0	1/1:3,9:12:27.05:287,27,0
chr10	39307759	.	AAAAG	A	1021.55	PASS	AB=0.969;AC=21;AF=0.375;AN=56;BaseQRankSum=7.234;DP=427;FS=18.407;HRun=0;HaplotypeScore=61.8224;InbreedingCoeff=0.3806;MQ=48.92;MQ0=43;MQRankSum=-1.229;QD=4.94;ReadPosRankSum=2.306;VQSLOD=0.0946;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:26:30.53:127,0,31	0/0:9,0:9:19.40:0,19,257	1/1:14,0:2:3.37:9,3,0	0/0:20,0:4:2.06:0,2,11	0/0:21,0:16:17.12:0,17,294	0/0:19,0:13:31.71:0,32,317	0/0:22,0:15:35.54:0,36,455	0/1:23,2:18:4.65:164,0,5	0/0:8,0:7:11.92:0,12,177	0/1:6,0:5:22.29:22,0,37	1/1:10,0:8:14.81:98,15,0	0/0:13,0:10:23.98:0,24,261	1/1:15,0:12:19.45:98,19,0	1/1:12,0:11:17.53:110,18,0	0/0:15,0:12:9.13:0,9,308	0/0:8,0:6:10:0,10,176	0/0:32,0:30:35.81:0,36,861	1/1:10,0:9:15.71:76,16,0	0/1:17,2:15:80.32:135,0,80	0/1:13,0:11:24.32:24,0,79	1/1:7,0:7:5.90:36,6,0	0/0:4,0:3:5.14:0,5,100	0/0:10,0:9:24.03:0,24,385	0/0:20,0:19:46.98:0,47,594	0/0:19,0:17:41.53:0,42,434	0/1:20,1:13:45.55:162,0,46	1/1:13,1:11:16.56:133,17,0	0/1:13,0:10:13.50:14,0,46
chr10	39309565	.	T	TA	2095.01	PASS	AB=0.885;AC=21;AF=0.375;AN=56;BaseQRankSum=-5.130;DP=313;FS=0.568;HRun=11;HaplotypeScore=33.5728;InbreedingCoeff=0.6654;MQ=54.03;MQ0=5;MQRankSum=-1.954;QD=13.69;ReadPosRankSum=-1.813;VQSLOD=2.3515;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:17,2:19:39.88:40,0,152	0/0:2,0:2:2.97:0,3,23	0/1:6,1:5:13.80:39,0,14	0/0:3,0:1:2.99:0,3,23	0/0:18,0:17:41.82:0,42,323	0/0:13,0:13:29.88:0,30,232	0/0:7,0:7:11.91:0,12,90	1/1:8,14:23:38.58:354,39,0	0/0:14,0:13:32.85:0,33,255	0/0:4,0:4:5.96:0,6,46	0/0:8,0:8:17.92:0,18,139	0/0:11,0:11:23.89:0,24,186	1/1:3,8:11:18.04:183,18,0	1/1:4,7:10:18.01:174,18,0	0/0:10,0:10:23.91:0,24,186	0/0:7,0:7:17.92:0,18,139	0/0:26,0:26:68.73:0,69,534	0/0:6,0:6:11.94:0,12,93	1/1:5,5:8:12.50:123,12,0	1/1:1,6:7:18:173,18,0	1/1:2,3:5:6.01:61,6,0	0/0:11,0:12:20.05:0,20,161	0/0:8,0:8:17.93:0,18,139	0/0:11,0:11:32.87:0,33,255	0/1:6,1:7:12.58:13,0,96	1/1:4,13:18:41.91:407,42,0	1/1:2,11:13:6.83:250,7,0	1/1:2,19:21:34.01:482,34,0
chr10	39309684	.	GA	G	3685.11	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=5.868;DP=397;FS=0.000;HRun=11;HaplotypeScore=48.1125;InbreedingCoeff=0.9676;MQ=70.40;MQ0=0;MQRankSum=-2.938;QD=19.19;ReadPosRankSum=1.488;VQSLOD=4.4276;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,18:21:47.93:394,48,0	0/0:6,0:7:17.77:0,18,158	0/0:17,0:12:18.46:0,18,152	0/0:14,0:13:17.95:0,18,121	0/0:8,0:8:11.92:0,12,95	0/0:19,1:20:35.44:0,35,562	0/0:14,0:14:36.09:0,36,384	1/1:5,21:27:7.20:459,7,0	0/0:21,0:21:54.12:0,54,563	1/1:0,15:15:44.94:368,45,0	1/1:1,4:5:11.98:98,12,0	0/0:12,0:13:32.91:0,33,326	1/1:0,14:14:32.96:271,33,0	1/1:1,8:10:22.39:161,22,0	0/0:9,0:9:24.01:0,24,238	0/0:13,0:13:33.08:0,33,352	0/0:27,0:29:68.82:0,69,690	1/1:3,15:18:38.95:320,39,0	1/1:1,14:15:41.93:340,42,0	1/1:3,9:12:26.96:222,27,0	1/1:1,11:12:29.96:246,30,0	0/0:8,0:8:15.01:0,15,149	0/0:7,0:7:21.02:0,21,212	0/0:14,0:14:36.08:0,36,377	0/0:1,0:11:20.05:0,20,106	1/1:2,12:14:32.96:271,33,0	1/1:1,20:21:27.95:436,28,0	1/1:3,4:8:11.98:99,12,0
chr10	39309793	.	TTC	T	840.21	PASS	AB=0.885;AC=15;AF=0.268;AN=56;BaseQRankSum=1.083;DP=343;FS=2.785;HRun=0;HaplotypeScore=50.5179;InbreedingCoeff=0.2730;MQ=61.72;MQ0=14;MQRankSum=-4.856;QD=7.12;ReadPosRankSum=-0.797;VQSLOD=2.4591;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:10:3.84:0,4,21	0/0:4,0:3:8.98:0,9,98	0/0:23,0:8:12.08:0,12,143	0/0:18,0:7:11.07:0,11,69	0/0:17,0:16:41.94:0,42,557	0/0:17,0:17:32.88:0,33,444	0/0:17,0:15:18.35:0,18,552	0/1:22,8:27:99:275,0,126	0/0:14,0:12:3.56:0,4,301	1/1:9,0:6:14.93:118,15,0	1/1:7,0:5:8.40:34,8,0	0/0:7,0:7:20.99:0,21,297	0/1:13,0:10:1.18:52,0,1	0/1:9,0:8:4.85:5,0,30	0/0:13,0:13:33.10:0,33,568	0/0:12,0:12:29.53:0,30,358	0/0:16,0:16:48.01:0,48,655	0/0:11,1:11:0.53:0,1,47	0/1:6,8:13:47.14:186,0,47	0/1:7,0:7:24.85:57,0,25	1/1:4,0:4:7.13:56,7,0	0/0:11,0:11:29.79:0,30,398	0/0:9,0:9:26.98:0,27,328	0/0:14,0:13:27.04:0,27,326	0/0:10,0:10:23.99:0,24,307	0/1:7,3:8:15.24:120,0,15	0/1:11,0:11:59.35:59,0,72	1/1:1,3:3:3.01:42,3,0
chr10	39309794	.	TC	T	1243.96	PASS	AB=1.000;AC=26;AF=0.481;AN=54;BaseQRankSum=4.111;DP=296;FS=3.604;HRun=3;HaplotypeScore=34.5280;InbreedingCoeff=0.7855;MQ=65.07;MQ0=13;MQRankSum=-5.925;QD=9.08;ReadPosRankSum=-1.995;VQSLOD=0.3580;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	0/0:4,0:3:3.01:0,3,39	0/1:23,0:8:21.45:21,0,62	0/1:18,0:7:1.91:8,0,2	0/0:18,0:17:35.92:0,36,381	0/0:15,0:15:24.14:0,24,300	0/0:16,0:14:27.81:0,28,379	1/1:16,2:16:32.41:219,32,0	0/0:10,0:9:17.89:0,18,211	1/1:9,0:6:17.94:145,18,0	1/1:1,6:6:12:130,12,0	0/0:7,0:7:17.92:0,18,192	1/1:6,6:9:21:214,21,0	1/1:2,4:5:12.04:145,12,0	0/0:11,0:11:33.09:0,33,406	0/0:11,0:11:18.03:0,18,205	0/0:17,0:17:44.89:0,45,436	1/1:2,6:7:9.03:110,9,0	1/1:9,0:8:17.69:117,18,0	1/1:4,0:4:8.78:72,9,0	1/1:3,0:3:8.79:53,9,0	0/0:11,0:11:19.76:0,20,282	0/0:9,0:9:20.99:0,21,212	0/0:11,0:10:21:0,21,206	0/0:11,0:11:23.93:0,24,230	1/1:10,0:8:14.85:112,15,0	1/1:6,0:6:11.92:86,12,0	1/1:3,1:3:2.92:17,3,0
chr10	39310297	.	AAAC	A	1307.76	PASS	AB=1.000;AC=16;AF=0.286;AN=56;BaseQRankSum=2.631;DP=489;FS=16.809;HRun=0;HaplotypeScore=101.2183;InbreedingCoeff=0.7597;MQ=65.93;MQ0=4;MQRankSum=-2.418;QD=7.52;ReadPosRankSum=-3.685;VQSLOD=0.7315;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:74.87:0,75,1197	0/0:8,0:7:3.85:0,4,217	0/0:30,0:18:19.99:0,20,416	0/0:23,0:18:27.71:0,28,297	0/1:20,0:19:33.65:34,0,312	0/0:18,0:18:48.03:0,48,793	0/0:18,0:18:51.07:0,51,819	1/1:36,1:37:60.18:515,60,0	0/0:16,0:16:26.29:0,26,379	0/0:19,0:19:54.14:0,54,959	0/0:13,0:13:35.37:0,35,522	0/1:21,0:20:2:2,0,491	0/0:7,0:7:18.71:0,19,89	0/0:6,0:6:2.22:0,2,7	0/0:16,0:16:24.03:0,24,306	0/0:18,0:18:25.51:0,26,433	0/0:13,0:13:14.68:0,15,222	0/0:13,0:13:32.45:0,32,575	1/1:17,2:18:37.14:256,37,0	1/1:13,1:14:19.01:107,19,0	1/1:17,0:17:29.57:213,30,0	0/0:16,0:16:29.66:0,30,411	0/0:18,0:18:30.16:0,30,383	0/0:23,0:23:38.80:0,39,510	0/0:12,0:12:36.06:0,36,585	1/1:15,0:14:3.24:113,3,0	1/1:18,0:17:34.94:208,35,0	1/1:13,0:12:9.18:49,9,0
chr10	39310298	.	AAC	A	3613.29	PASS	AB=0.952;AC=21;AF=0.375;AN=56;BaseQRankSum=1.425;DP=485;FS=8.959;HRun=0;HaplotypeScore=85.5282;InbreedingCoeff=0.4419;MQ=65.89;MQ0=5;MQRankSum=-3.020;QD=15.51;ReadPosRankSum=-4.681;VQSLOD=1.5478;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:75.03:0,75,977	0/1:6,2:7:40.13:40,0,138	0/0:29,1:17:20.67:0,21,344	0/0:24,0:19:10.10:0,10,217	0/1:18,1:18:99:107,0,224	0/0:16,0:16:47.88:0,48,618	0/0:19,0:19:54.10:0,54,711	1/1:7,30:37:86.12:1112,86,0	0/1:16,0:16:74.54:75,0,214	0/0:18,0:18:54.15:0,54,781	0/0:13,0:13:30.80:0,31,404	0/1:19,2:20:99:122,0,276	0/1:7,0:7:21.59:22,0,27	0/0:6,0:6:2.22:0,2,7	0/0:17,0:17:23.52:0,24,223	0/1:18,0:18:3.08:3,0,297	0/1:13,0:13:21.69:22,0,145	0/0:13,0:13:32.29:0,32,462	1/1:9,9:17:49.21:531,49,0	1/1:2,10:12:24.20:206,24,0	1/1:9,7:16:38.34:366,38,0	0/0:15,0:15:13.62:0,14,278	0/0:18,0:18:30.07:0,30,285	0/0:23,0:23:35.44:0,35,350	0/0:12,0:12:36.07:0,36,492	1/1:8,8:15:7.70:341,8,0	1/1:10,9:19:46.42:509,46,0	1/1:0,13:12:12.01:157,12,0
chr10	39310299	.	AC	A	2406.04	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=2.994;DP=493;FS=5.484;HRun=1;HaplotypeScore=85.1140;InbreedingCoeff=0.4208;MQ=65.66;MQ0=5;MQRankSum=-1.510;QD=9.47;ReadPosRankSum=-5.143;VQSLOD=-0.7335;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:72.59:0,73,776	0/1:9,0:8:19.98:20,0,74	0/0:29,1:17:23.81:0,24,283	0/1:26,0:19:2.66:3,0,163	0/1:21,0:20:58.68:59,0,140	0/0:19,0:19:40.97:0,41,427	0/0:18,0:18:54.01:0,54,575	1/1:33,2:35:96.52:753,97,0	0/1:18,0:18:90.11:146,0,90	0/0:18,0:18:54.06:0,54,614	0/0:13,0:13:23.59:0,24,294	0/1:21,0:20:81.25:81,0,135	0/0:7,0:7:17.49:0,17,82	0/0:6,0:6:0.17:0,0,4	0/1:18,0:18:16.51:17,0,122	0/0:18,0:18:5.38:0,5,202	0/1:15,0:15:22.92:23,0,93	0/0:13,0:13:32.27:0,32,360	1/1:17,1:17:46.33:336,46,0	1/1:11,0:11:24.19:165,24,0	1/1:15,1:16:38.02:283,38,0	0/0:15,1:16:12.97:0,13,175	0/0:18,0:18:28.69:0,29,195	0/0:23,0:23:7.22:0,7,199	0/0:12,0:12:36.07:0,36,404	1/1:13,1:13:7.50:246,7,0	1/1:17,2:18:47.68:372,48,0	1/1:13,0:12:11.96:95,12,0
chr10	39310300	.	C	CAA	3813.08	PASS	AB=0.986;AC=31;AF=0.554;AN=56;BaseQRankSum=-0.993;DP=517;FS=3.279;HRun=11;HaplotypeScore=109.6423;InbreedingCoeff=0.4428;MQ=64.40;MQ0=6;MQRankSum=-3.128;QD=10.36;ReadPosRankSum=-6.641;VQSLOD=0.5368;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:30:43.10:0,43,463	1/1:6,2:9:21.03:258,21,0	0/1:31,0:17:6.98:7,0,119	0/0:23,0:17:17.37:0,17,139	1/1:16,4:20:31.77:318,32,0	0/0:18,0:19:23.42:0,23,213	0/0:18,0:19:35.97:0,36,392	0/1:39,0:39:50.73:234,0,51	1/1:15,3:19:43.87:448,44,0	0/0:18,0:19:38.95:0,39,428	0/1:12,0:14:1.06:1,0,101	1/1:17,7:23:51.87:606,52,0	0/1:2,0:7:2.28:14,0,2	0/1:0,0:5:0:0,0,0	1/1:5,13:18:11.94:167,12,0	1/1:4,13:20:23.51:267,24,0	1/1:6,9:16:17.97:183,18,0	0/0:13,0:13:29.22:0,29,268	0/1:19,0:18:20.18:102,0,20	1/1:14,0:14:3.53:57,4,0	0/1:14,0:15:11.86:15,0,12	1/1:4,14:18:27.44:317,27,0	1/1:4,13:19:20.77:214,21,0	1/1:8,14:23:29.12:382,29,0	0/0:12,0:12:27.04:0,27,262	0/1:16,0:15:34.30:103,0,34	0/1:20,0:19:8.11:118,0,8	0/0:13,0:12:6.46:0,6,20
chr10	39310312	.	C	CTG	259.77	PASS	AB=0.929;AC=7;AF=0.130;AN=54;BaseQRankSum=5.765;DP=516;FS=1.737;HRun=0;HaplotypeScore=123.4450;InbreedingCoeff=0.3944;MQ=57.21;MQ0=9;MQRankSum=-6.422;QD=3.82;ReadPosRankSum=-2.175;VQSLOD=2.6340;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:57.19:0,57,752	0/0:11,0:10:15:0,15,164	0/0:36,0:11:3.52:0,4,140	0/0:40,0:18:9.07:0,9,188	0/0:16,0:15:24.06:0,24,275	0/0:15,0:15:33.10:0,33,422	0/0:23,0:23:69.23:0,69,910	0/0:37,0:37:48.08:0,48,432	0/0:20,0:20:48.10:0,48,575	0/0:20,0:20:45.62:0,46,598	0/0:13,0:13:24.08:0,24,318	0/0:25,0:24:57.17:0,57,693	1/1:6,0:8:14.91:161,15,0	./.	0/0:19,0:19:27.07:0,27,334	0/0:18,0:18:27.03:0,27,300	0/0:14,0:14:18.05:0,18,211	0/0:13,0:13:36.12:0,36,473	0/0:16,0:16:28.27:0,28,327	0/1:12,1:13:24.52:25,0,55	0/0:16,0:15:16.01:0,16,216	0/0:18,0:18:15:0,15,148	0/0:18,0:18:17.98:0,18,201	0/0:14,0:14:26.86:0,27,265	0/0:13,0:13:36.12:0,36,473	0/1:16,2:17:95.46:110,0,95	0/1:22,1:21:73.92:74,0,75	1/1:6,0:5:5.17:21,5,0
chr10	39310320	.	A	ATG	1457.31	PASS	AB=0.886;AC=16;AF=0.286;AN=56;BaseQRankSum=0.679;DP=529;FS=2.241;HRun=0;HaplotypeScore=105.3303;InbreedingCoeff=0.5456;MQ=53.20;MQ0=14;MQRankSum=-5.281;QD=7.63;ReadPosRankSum=-1.390;VQSLOD=2.9306;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:26:39.18:0,39,555	0/0:11,0:10:15.05:0,15,181	0/0:48,0:10:14.91:0,15,132	0/1:49,0:11:20.08:20,0,82	0/0:15,0:14:21.06:0,21,254	0/0:12,0:12:24.07:0,24,281	0/0:24,0:24:66.19:0,66,787	0/1:21,6:27:6.32:367,0,6	0/0:19,0:19:48.13:0,48,568	0/1:20,1:21:6.29:6,0,410	0/0:13,0:13:24.05:0,24,276	0/0:29,0:28:63.15:0,63,728	1/1:10,0:10:9.03:109,9,0	0/0:7,0:7:0:0,0,0	0/0:22,0:22:32.91:0,33,364	0/0:21,0:21:30.09:0,30,363	0/0:14,0:15:26.88:0,27,270	0/0:14,0:13:33.05:0,33,379	1/1:16,1:15:6.02:88,6,0	1/1:7,4:11:3:48,3,0	1/1:14,1:14:4.14:46,4,0	0/0:17,0:17:15.05:0,15,182	0/0:14,0:14:9.03:0,9,109	0/0:15,0:15:18.06:0,18,217	0/0:15,0:16:35.90:0,36,375	0/1:12,5:15:6.28:396,0,6	1/1:10,9:18:9.21:446,9,0	1/1:2,2:2:6.02:97,6,0
chr10	39310342	.	GCA	G	351.28	PASS	AB=0.891;AC=8;AF=0.143;AN=56;BaseQRankSum=0.694;DP=564;FS=0.868;HRun=0;HaplotypeScore=94.9678;InbreedingCoeff=0.2168;MQ=51.51;MQ0=29;MQRankSum=1.576;QD=4.75;ReadPosRankSum=0.409;VQSLOD=2.8563;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:27:45.01:0,45,421	0/0:6,0:6:12.04:0,12,189	0/0:71,0:12:27.02:0,27,310	0/0:72,0:14:12.02:0,12,153	0/1:11,3:14:69.91:70,0,389	0/1:10,3:13:99:100,0,366	0/0:31,0:31:24.86:0,25,860	0/0:33,0:31:54:0,54,602	0/0:21,1:22:21.81:0,22,780	0/0:15,0:15:27:0,27,243	0/0:13,0:11:15.01:0,15,148	0/0:23,0:23:54.18:0,54,841	0/0:10,0:11:3.01:0,3,38	1/1:12,0:12:0.47:1,0,0	0/0:24,0:24:57.19:0,57,898	0/0:23,1:24:8.98:0,9,582	0/0:16,0:15:24.08:0,24,379	0/0:17,0:14:33.01:0,33,322	0/0:13,0:10:24:0,24,259	0/0:8,0:8:3:0,3,26	0/0:11,0:10:5.99:0,6,53	0/1:12,1:13:17.28:17,0,216	0/0:10,1:11:18.06:0,18,262	0/1:11,0:11:20.08:20,0,174	1/1:1,7:11:26.74:271,27,0	0/0:14,0:12:30.05:0,30,328	0/0:15,0:14:23.68:0,24,229	0/0:11,0:9:15.03:0,15,161
chr10	39310366	.	A	ACACACACACACACG	4393.98	PASS	AB=0.524;AC=20;AF=0.357;AN=56;BaseQRankSum=-6.242;DP=586;FS=1.909;HRun=0;HaplotypeScore=183.9056;InbreedingCoeff=0.7959;MQ=59.98;MQ0=26;MQRankSum=-0.322;QD=24.28;ReadPosRankSum=-6.112;VQSLOD=2.1648;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:3,0:34:10.65:0,11,699	0/0:5,0:5:15.04:0,15,516	0/0:64,0:19:42.09:0,42,580	0/0:61,0:21:22.40:0,22,566	0/0:23,0:23:65.99:0,66,1703	0/0:20,0:20:58.65:0,59,1552	0/0:27,0:27:79.06:0,79,2375	1/1:33,0:32:89.53:1578,90,0	0/0:19,0:19:54.17:0,54,2198	0/1:1,0:22:99:208,0,383	0/1:2,0:13:26.91:27,0,160	0/0:24,0:24:66.17:0,66,2267	1/1:5,0:5:9.82:86,10,0	1/1:10,0:10:12.33:103,12,0	0/0:25,0:25:69.18:0,69,2542	0/0:20,0:20:43.69:0,44,1750	0/0:13,0:13:30.07:0,30,1103	0/0:5,0:15:32.94:0,33,568	1/1:14,0:14:38.42:319,38,0	1/1:7,0:7:8.96:102,9,0	1/1:1,0:21:8.56:138,9,0	0/0:14,0:14:33:0,33,753	0/0:14,0:14:18.05:0,18,569	0/0:11,0:11:27.03:0,27,687	0/0:14,0:14:33.14:0,33,773	1/1:0,0:21:16.19:737,16,0	1/1:1,1:23:12.04:770,12,0	1/1:9,0:9:23.80:326,24,0
chr10	39310771	.	A	AGTAGTGCTTGCCT	16429.42	PASS	AB=0.650;AC=13;AF=0.232;AN=56;BaseQRankSum=-5.377;DP=630;FS=9.063;HRun=0;HaplotypeScore=212.8262;InbreedingCoeff=0.8979;MQ=81.07;MQ0=0;MQRankSum=-11.544;QD=130.39;ReadPosRankSum=-0.740;VQSLOD=3.8251;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,123,4815	0/0:15,0:15:45.12:0,45,1599	0/0:22,0:22:62.86:0,63,2129	0/0:16,0:16:45.15:0,45,1719	0/0:30,0:30:90.31:0,90,3704	0/0:17,0:17:51.17:0,51,1962	0/0:17,0:17:51.17:0,51,1897	1/1:16,3:22:60.17:2902,60,0	0/0:24,0:24:72.23:0,72,2768	0/0:41,0:41:99:0,123,4891	0/0:10,0:10:30.10:0,30,1232	0/0:31,0:31:93.31:0,93,3780	0/0:28,0:28:81.28:0,81,3112	0/0:27,0:27:81.26:0,81,3295	0/0:34,0:34:99:0,99,3824	0/0:26,0:26:78.25:0,78,3105	0/0:16,0:16:48.15:0,48,1739	0/0:27,0:27:81.25:0,81,3052	1/1:4,3:13:33.11:1276,33,0	1/1:1,11:13:30.10:1868,30,0	1/1:3,4:11:21.07:1163,21,0	0/0:26,0:26:78.27:0,78,3080	0/0:14,0:14:42.13:0,42,1420	0/0:18,0:17:54.17:0,54,2070	0/0:21,0:21:63.19:0,63,2495	0/1:12,9:23:56.61:3588,0,57	1/1:6,17:28:69.71:4210,70,0	1/1:0,7:9:21.07:1423,21,0
chr10	39310959	.	TC	T	1215.68	PASS	AB=0.533;AC=7;AF=0.125;AN=56;BaseQRankSum=8.973;DP=635;FS=59.689;HRun=1;HaplotypeScore=61.3716;InbreedingCoeff=0.7990;MQ=58.26;MQ0=50;MQRankSum=-7.119;QD=19.00;ReadPosRankSum=-1.259;VQSLOD=0.1038;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,26:15:42.07:544,42,0	0/0:8,0:7:21.07:0,21,327	0/0:30,0:13:36.09:0,36,514	0/0:18,0:6:12.93:0,13,182	0/0:29,0:29:84.29:0,84,1324	0/0:15,0:15:45.15:0,45,719	0/0:18,0:17:42.14:0,42,661	0/0:30,0:25:75.26:0,75,1196	0/0:32,0:31:93.19:0,93,1427	1/1:2,12:9:24.08:335,24,0	1/1:1,12:10:21.07:293,21,0	0/0:22,0:22:66.23:0,66,1055	0/0:19,0:16:45.15:0,45,717	0/0:28,0:27:66.22:0,66,1042	0/0:31,0:31:93.32:0,93,1484	0/0:27,0:27:81.28:0,81,1295	0/0:28,0:28:84.26:0,84,1313	0/1:1,7:7:29.89:191,0,30	0/0:30,0:29:84.27:0,84,1293	0/0:19,0:19:57.16:0,57,862	0/0:43,0:42:99:0,108,1712	0/0:26,0:26:75.20:0,75,1108	0/0:17,0:17:48.16:0,48,767	0/0:21,0:21:63.20:0,63,971	0/0:20,0:20:57.19:0,57,909	0/0:28,1:25:75.22:0,75,1164	0/0:28,0:23:63.21:0,63,1005	0/0:3,0:2:6:0,6,71
chr10	39311734	.	TA	T	2701.32	PASS	AB=0.780;AC=14;AF=0.250;AN=56;BaseQRankSum=4.806;DP=630;FS=8.091;HRun=11;HaplotypeScore=67.5843;InbreedingCoeff=0.8089;MQ=61.81;MQ0=0;MQRankSum=-1.119;QD=16.88;ReadPosRankSum=0.871;VQSLOD=4.3594;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:84.19:0,84,882	0/0:14,0:14:36.09:0,36,384	0/1:6,0:5:7.37:7,0,40	0/0:6,0:6:8.98:0,9,84	0/0:37,0:36:84.13:0,84,868	0/0:27,0:27:63.12:0,63,659	0/0:15,0:15:39.07:0,39,401	1/1:4,26:30:77.86:634,78,0	0/0:21,0:21:54.11:0,54,562	0/0:32,0:33:74.68:0,75,752	0/0:15,0:15:42.11:0,42,448	0/0:22,0:22:50.70:0,51,509	0/0:2,0:25:51.12:0,51,259	0/0:1,0:21:48.46:0,48,244	0/0:33,0:33:77.41:0,77,959	0/0:23,0:23:63.14:0,63,657	0/0:23,1:25:41.36:0,41,609	0/0:26,1:27:22.87:0,23,636	1/1:3,12:16:37.94:293,38,0	1/1:4,25:28:71.86:586,72,0	1/1:1,6:7:17.98:148,18,0	0/0:28,1:29:44.48:0,44,654	0/0:14,1:15:14.44:0,14,351	0/0:29,0:29:75.07:0,75,768	0/0:23,0:23:57.10:0,57,596	0/1:6,22:28:21.08:461,0,21	1/1:3,24:27:53.93:443,54,0	1/1:0,17:17:38.96:320,39,0
chr10	39313586	.	A	AT	5701.72	PASS	AC=24;AF=0.444;AN=54;BaseQRankSum=-3.025;DP=598;FS=4.013;HRun=0;HaplotypeScore=46.9258;InbreedingCoeff=0.9661;MQ=57.50;MQ0=23;MQRankSum=-5.317;QD=30.17;ReadPosRankSum=-6.366;VQSLOD=2.4760;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:1,20:13:27.09:430,27,0	0/0:14,0:14:42.14:0,42,586	0/0:28,0:5:15.02:0,15,189	0/0:31,0:4:12.04:0,12,168	0/0:19,0:19:57.19:0,57,796	0/0:22,0:22:66.17:0,66,884	0/0:27,0:27:81.27:0,81,1132	./.	0/0:35,0:35:99:0,105,1464	1/1:0,11:8:24.08:381,24,0	1/1:0,13:9:24.08:368,24,0	0/0:41,0:41:99:0,120,1658	1/1:0,21:14:39.13:618,39,0	1/1:0,20:11:33.11:514,33,0	0/0:30,0:30:90.27:0,90,1222	0/0:25,0:25:75.25:0,75,1049	0/0:41,0:41:99:0,120,1658	1/1:1,17:15:36.12:560,36,0	1/1:2,10:7:18.03:249,18,0	1/1:0,12:11:30.10:479,30,0	1/1:0,26:21:60.20:955,60,0	0/0:20,0:20:60.20:0,60,837	0/0:12,0:12:36.12:0,36,503	0/0:26,0:26:78.26:0,78,1090	0/0:23,0:23:66.20:0,66,902	1/1:0,14:10:30.10:479,30,0	1/1:0,18:14:39.13:620,39,0	1/1:0,3:1:3.01:48,3,0
chr10	39315789	.	ACTAGTG	A	6247.04	PASS	AB=0.511;AC=13;AF=0.232;AN=56;BaseQRankSum=13.725;DP=676;FS=9.077;HRun=0;HaplotypeScore=141.7003;InbreedingCoeff=0.8866;MQ=93.17;MQ0=0;MQRankSum=-10.865;QD=45.60;ReadPosRankSum=-1.215;VQSLOD=3.9895;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,129,4379	0/0:10,0:10:30.03:0,30,979	0/0:34,0:34:93.31:0,93,3072	0/0:31,0:31:93.28:0,93,2912	0/0:22,0:22:63.22:0,63,2137	0/0:26,0:26:75.24:0,75,2546	0/0:18,0:18:54.15:0,54,1760	1/1:9,29:38:87.23:1767,87,0	0/0:21,0:21:60.21:0,60,2132	0/0:27,0:27:81.28:0,81,2843	0/0:15,0:15:36.11:0,36,1200	0/0:29,0:29:81.25:0,81,2642	0/0:28,0:28:81.28:0,81,2775	0/0:22,0:22:63.22:0,63,2210	0/0:26,0:26:78.25:0,78,2624	0/0:32,0:32:93.32:0,93,3224	0/0:29,0:29:78.27:0,78,2780	0/0:25,0:25:66.23:0,66,2332	1/1:1,13:14:39.12:826,39,0	1/1:0,10:10:23.81:355,24,0	1/1:3,17:20:20.71:445,21,0	0/0:24,0:24:69.24:0,69,2358	0/0:17,0:17:51.18:0,51,1758	0/0:39,0:39:99:0,111,3733	0/0:21,0:21:63.22:0,63,2087	0/1:1,23:23:37.81:1419,0,38	1/1:1,21:22:54.12:1223,54,0	1/1:2,7:9:9.03:213,9,0
chr10	39319030	.	GA	G	4138.51	PASS	AB=0.596;AC=19;AF=0.339;AN=56;BaseQRankSum=6.532;DP=693;FS=4.925;HRun=12;HaplotypeScore=78.9269;InbreedingCoeff=0.7063;MQ=77.55;MQ0=1;MQRankSum=-3.108;QD=15.10;ReadPosRankSum=-0.038;VQSLOD=4.3767;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,24:28:60.37:451,60,0	0/0:12,0:13:35.91:0,36,349	0/0:27,0:21:28.48:0,28,246	0/0:24,1:23:1.17:0,1,158	0/0:25,0:28:71.98:0,72,676	0/0:29,2:31:60.88:0,61,772	0/0:23,1:25:40.93:0,41,552	1/1:10,26:37:74.63:577,75,0	0/0:25,0:27:59.87:0,60,563	1/1:3,17:20:27.88:363,28,0	0/1:8,15:23:9.75:276,0,10	0/0:23,0:23:51.08:0,51,506	0/0:7,0:25:42.90:0,43,232	0/0:5,0:25:45.62:0,46,244	0/0:29,1:31:48.52:0,49,661	0/0:30,1:33:60.74:0,61,771	0/0:30,0:32:77.98:0,78,769	1/1:2,13:15:5.42:225,5,0	0/1:10,12:23:17.90:224,0,18	1/1:10,16:27:19.36:323,19,0	1/1:7,23:30:16.25:439,16,0	0/0:16,0:17:41.91:0,42,405	0/0:18,0:18:42.03:0,42,392	0/0:17,2:19:7.62:0,8,428	0/0:19,0:20:30.68:0,31,466	1/1:4,19:23:59.57:454,60,0	1/1:5,31:36:83.65:650,84,0	0/1:2,9:11:25.09:156,0,25
chr10	39320187	.	CA	C	579.83	PASS	AB=0.904;AC=13;AF=0.232;AN=56;BaseQRankSum=2.970;DP=513;FS=0.532;HRun=16;HaplotypeScore=71.9985;InbreedingCoeff=0.4018;MQ=67.80;MQ0=3;MQRankSum=2.006;QD=3.77;ReadPosRankSum=3.260;VQSLOD=0.3923;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,17:22:43.06:257,43,0	0/0:8,1:9:2.88:0,3,123	0/0:25,0:15:5.40:0,5,64	0/1:32,0:22:7.55:8,0,40	0/0:24,3:28:5.66:0,6,244	0/0:15,0:16:17.93:0,18,142	0/0:15,0:15:26.96:0,27,224	0/0:17,2:24:20.67:0,21,250	0/0:13,0:13:14.85:0,15,114	1/1:3,14:17:35.11:214,35,0	1/1:12,4:15:14.45:89,14,0	0/0:23,1:25:18.34:0,18,263	0/0:6,0:11:5.68:0,6,29	0/0:12,0:13:17.14:0,17,88	0/1:10,0:10:6.01:6,0,59	0/0:19,0:19:20.94:0,21,167	0/0:28,1:33:35.98:0,36,368	1/1:6,10:18:24.53:136,25,0	0/1:9,2:13:19.07:19,0,83	0/0:19,1:19:5.79:0,6,147	0/0:4,0:4:3:0,3,25	0/1:18,3:21:12.22:12,0,220	0/0:15,1:16:2.94:0,3,127	0/0:26,1:28:29.78:0,30,349	0/0:13,0:17:15.82:0,16,120	0/0:20,0:23:18.02:0,18,143	0/0:16,1:18:11.68:0,12,177	0/1:3,1:5:3.19:3,0,73
chr10	39320239	.	CAG	C	2285.78	PASS	AB=0.814;AC=34;AF=0.654;AN=52;BaseQRankSum=-0.055;DP=405;FS=19.396;HRun=0;HaplotypeScore=77.6482;InbreedingCoeff=0.4466;MQ=73.47;MQ0=11;MQRankSum=0.981;QD=8.63;ReadPosRankSum=1.343;VQSLOD=1.8349;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:9,0:9:0.33:1,0,0	1/1:4,0:3:6.02:67,6,0	0/0:25,0:13:4.22:0,4,25	0/0:41,0:22:5.10:0,5,22	0/1:12,13:24:24.81:158,0,25	1/1:2,8:10:8.86:84,9,0	1/1:3,3:6:3.01:35,3,0	0/0:25,0:25:6.47:0,6,55	1/1:2,13:15:30.01:319,30,0	1/1:25,0:24:14.31:78,14,0	1/1:19,0:19:16.74:80,17,0	1/1:3,8:11:12.04:139,12,0	0/0:7,0:7:5.96:0,6,44	0/0:4,0:3:0.47:0,0,1	1/1:1,13:14:32.88:346,33,0	1/1:5,17:21:33.10:383,33,0	1/1:10,11:20:13.59:171,14,0	0/1:10,0:10:7.07:8,0,7	1/1:7,0:7:2.80:13,3,0	0/1:16,0:16:6.58:29,0,7	./.	1/1:9,3:11:17.81:166,18,0	0/1:4,8:12:3.09:61,0,3	1/1:9,6:15:24.07:278,24,0	0/0:17,0:17:32.77:0,33,422	0/0:15,0:14:4.03:0,4,28	1/1:10,0:10:5.64:27,6,0	./.
chr10	39320251	.	GAGAGAGAGAGAGAGAA	G	2030.50	PASS	AB=0.937;AC=16;AF=0.296;AN=54;BaseQRankSum=0.795;DP=390;FS=6.757;HRun=0;HaplotypeScore=144.4339;InbreedingCoeff=0.4894;MQ=66.42;MQ0=17;MQRankSum=-4.357;QD=16.64;ReadPosRankSum=0.966;VQSLOD=2.2709;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:7,0:7:11.98:99,12,0	0/0:4,0:3:6.02:0,6,290	0/0:24,0:10:8.87:0,9,192	0/0:43,0:17:11.44:0,11,172	0/0:20,0:19:20.86:0,21,863	0/0:11,0:10:15.05:0,15,816	0/0:5,0:5:6.02:0,6,272	1/1:16,0:16:6.50:54,7,0	0/0:18,0:18:30.10:0,30,1578	1/1:19,3:21:33.18:795,33,0	1/1:20,0:20:17.24:454,17,0	0/0:13,0:13:21.07:0,21,1107	0/0:8,0:8:12.04:0,12,595	0/1:4,0:3:17.91:18,0,94	0/0:15,0:14:33.11:0,33,1767	0/0:20,0:19:33.11:0,33,1875	0/0:19,0:18:26.94:0,27,1092	0/1:7,1:8:11.78:133,0,12	0/1:5,1:6:25.17:157,0,25	1/1:14,1:15:11.78:298,12,0	./.	0/0:12,0:11:5.89:0,6,933	0/0:12,0:11:18.95:0,19,859	0/0:19,0:19:24.75:0,25,1678	0/0:16,0:16:42.09:0,42,2043	1/1:12,0:11:4.13:57,4,0	0/1:12,0:11:32.91:142,0,33	0/0:2,0:2:0.27:0,0,38
chr10	39320253	.	GAGAGAGAGAGAGAA	G	2926.62	PASS	AB=1.000;AC=21;AF=0.389;AN=54;BaseQRankSum=-1.684;DP=389;FS=12.572;HRun=0;HaplotypeScore=129.8254;InbreedingCoeff=0.8136;MQ=62.93;MQ0=17;MQRankSum=-6.106;QD=23.04;ReadPosRankSum=-0.961;VQSLOD=1.2820;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:9,0:9:14.98:123,15,0	0/0:4,0:3:6.02:0,6,240	0/0:23,0:9:8.88:0,9,170	0/0:41,0:14:13.95:0,14,156	0/0:20,0:19:20.86:0,21,737	0/0:11,0:10:15.05:0,15,690	0/0:5,0:5:6.02:0,6,223	1/1:12,0:12:10.52:91,11,0	0/0:18,0:18:30.10:0,30,1328	1/1:19,3:21:47.53:913,48,0	1/1:2,17:19:17.48:725,17,0	0/0:13,0:13:21.07:0,21,932	0/0:8,0:8:12.04:0,12,503	0/1:4,0:3:17.91:18,0,69	0/0:15,0:14:33.11:0,33,1487	0/0:20,0:19:33.11:0,33,1597	0/0:19,0:18:26.69:0,27,912	1/1:11,0:11:14.25:175,14,0	1/1:6,0:6:17.85:201,18,0	1/1:2,13:15:11.78:355,12,0	./.	0/0:11,0:10:4.91:0,5,749	0/0:13,0:12:21.44:0,21,722	0/0:18,0:18:27.75:0,28,1453	0/0:16,0:16:42.01:0,42,1787	1/1:13,0:12:23.75:176,24,0	1/1:2,9:10:6.02:242,6,0	1/1:5,0:5:11.93:113,12,0
chr10	39320946	.	TCTGCTGAGCA	T	284.50	PASS	AC=6;AF=0.167;AN=36;BaseQRankSum=3.298;DP=401;FS=14.342;HRun=0;HaplotypeScore=120.8610;InbreedingCoeff=0.8030;MQ=66.59;MQ0=29;MQRankSum=-3.336;QD=23.71;ReadPosRankSum=0.405;VQSLOD=2.2895;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	0/0:12,0:12:36.12:0,36,1778	0/0:34,0:32:93.28:0,93,3957	0/0:29,0:28:78.25:0,78,3186	0/0:17,0:15:48.16:0,48,2351	0/0:26,1:26:66.23:0,66,3422	0/0:23,1:23:66.23:0,66,3161	./.	0/0:24,1:23:60.21:0,60,3121	1/1:4,2:4:3.01:93,3,0	./.	0/0:31,3:29:72.25:0,72,3801	./.	./.	0/0:26,2:26:63.22:0,63,3255	0/0:29,3:29:72.25:0,72,3514	0/0:30,0:30:90.25:0,90,4214	1/1:1,3:3:3.01:99,3,0	./.	./.	./.	0/0:19,1:19:48.16:0,48,2518	0/0:20,0:20:51.12:0,51,2509	0/0:21,0:20:63.22:0,63,3285	0/0:14,0:14:42.04:0,42,1857	./.	./.	1/1:0,2:2:6.02:197,6,0
chr10	39321397	.	G	GA	154.60	PASS	AB=0.891;AC=6;AF=0.130;AN=46;BaseQRankSum=4.910;DP=639;FS=32.631;HRun=0;HaplotypeScore=39.1050;InbreedingCoeff=0.0299;MQ=28.42;MQ0=190;MQRankSum=-2.022;QD=1.25;ReadPosRankSum=0.517;VQSLOD=0.5463;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:38,2:26:3.01:44,3,0	0/1:11,1:9:19.43:19,0,164	./.	./.	0/0:19,0:14:15.05:0,15,208	0/0:29,0:21:36.12:0,36,497	0/0:35,0:16:15.05:0,15,203	0/0:12,0:1:2.98:0,3,21	0/0:21,0:16:18.04:0,18,233	0/1:26,6:26:99:110,0,746	0/0:19,0:14:18.06:0,18,251	0/0:28,0:22:33.08:0,33,434	0/0:5,0:1:3.01:0,3,42	0/0:3,0:1:3.01:0,3,42	0/0:36,0:29:36.08:0,36,479	0/0:33,0:27:36.11:0,36,500	0/0:37,0:31:27.09:0,27,377	0/1:25,2:17:35.88:40,0,36	0/0:9,0:2:6.02:0,6,83	0/0:16,0:14:15.05:0,15,209	./.	0/0:27,0:23:30.10:0,30,406	0/0:23,0:17:24.04:0,24,288	0/0:22,0:15:9.03:0,9,126	./.	0/1:11,2:12:54.66:55,0,382	./.	0/0:6,1:4:6.02:0,6,84
chr10	39324553	.	T	TAAAC	5772.03	PASS	AB=0.683;AC=12;AF=0.214;AN=56;BaseQRankSum=2.539;DP=650;FS=1.968;HRun=0;HaplotypeScore=115.7693;InbreedingCoeff=0.7984;MQ=69.58;MQ0=1;MQRankSum=-4.150;QD=34.98;ReadPosRankSum=-0.405;VQSLOD=4.6739;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:60.19:0,60,935	0/0:9,0:9:18.05:0,18,269	0/0:29,0:28:27.09:0,27,428	0/0:23,0:23:33.11:0,33,525	0/0:29,0:29:69.22:0,69,1097	0/0:15,0:15:39.13:0,39,630	0/0:13,0:13:13.46:0,13,355	1/1:22,12:35:48.13:874,48,0	0/0:17,0:17:42.14:0,42,688	0/0:26,0:26:54.18:0,54,862	0/0:26,0:26:69.24:0,69,1119	0/0:26,0:26:69.24:0,69,1130	0/0:28,0:28:60.20:0,60,969	0/0:21,0:21:60.18:0,60,934	0/0:28,0:28:72.22:0,72,1130	0/0:26,0:26:75.26:0,75,1229	0/0:22,0:22:54.18:0,54,884	0/0:23,0:23:50.89:0,51,718	0/1:12,9:21:6.15:812,0,6	1/1:8,11:20:30.10:731,30,0	1/1:3,7:11:21.07:512,21,0	0/0:19,0:19:48.16:0,48,786	0/0:26,0:26:69.19:0,69,1092	0/0:19,0:19:51.13:0,51,806	0/0:23,0:23:57.16:0,57,897	0/1:17,16:34:19.82:1014,0,20	1/1:8,24:33:63.22:1536,63,0	1/1:2,9:11:12.04:293,12,0
chr10	39325284	.	G	GGTGTGT	3107.36	PASS	AB=0.917;AC=31;AF=0.620;AN=50;BaseQRankSum=-3.717;DP=776;FS=7.228;HRun=0;HaplotypeScore=175.2919;InbreedingCoeff=0.4583;MQ=43.73;MQ0=150;MQRankSum=1.609;QD=6.94;ReadPosRankSum=-0.409;VQSLOD=2.0977;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:43:2.79:0,3,27	1/1:8,0:6:2.97:20,3,0	./.	./.	1/1:23,0:20:3.79:26,4,0	0/0:17,0:16:2.85:0,3,42	0/0:23,0:23:11.90:0,12,135	./.	1/1:23,1:23:3.01:38,3,0	1/1:23,0:22:2.44:13,2,0	0/1:8,0:10:0:0,0,0	1/1:31,0:26:27.06:418,27,0	1/1:24,0:17:15.99:357,16,0	1/1:35,0:28:20.26:401,20,0	1/1:43,0:37:21.49:352,21,0	1/1:26,0:22:14.48:243,14,0	0/1:22,7:29:54.89:125,0,55	0/0:15,0:18:2.68:0,3,42	0/0:22,0:12:2.60:0,3,10	0/0:14,0:13:6.02:0,6,119	0/0:69,0:65:14.93:0,15,255	1/1:20,0:18:9.03:189,9,0	1/1:27,0:22:11.77:194,12,0	1/1:44,0:41:39.13:789,39,0	1/1:18,3:20:3.01:84,3,0	1/1:23,0:20:0.47:1,0,0	0/0:20,0:15:3.01:0,3,60	0/1:11,0:11:10.42:10,0,54
chr10	39325584	.	ATGGGTGC	A	8422.25	PASS	AB=0.640;AC=25;AF=0.446;AN=56;BaseQRankSum=14.048;DP=659;FS=10.944;HRun=0;HaplotypeScore=151.1611;InbreedingCoeff=0.9083;MQ=59.31;MQ0=14;MQRankSum=-13.199;QD=28.07;ReadPosRankSum=1.288;VQSLOD=3.6355;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:18,19:37:32.23:758,32,0	0/0:10,0:10:27.09:0,27,945	0/0:34,0:22:42.72:0,43,1242	0/0:22,0:16:24.07:0,24,632	0/0:16,0:16:39.13:0,39,1420	0/0:18,0:18:24.08:0,24,858	0/0:21,0:21:48.16:0,48,1528	1/1:12,5:16:9.03:190,9,0	0/0:22,0:22:57.19:0,57,2050	1/1:11,13:20:33.10:721,33,0	1/1:7,11:17:21.07:488,21,0	0/0:31,0:31:69.22:0,69,2339	1/1:15,19:34:39.13:906,39,0	1/1:11,27:37:57.20:1294,57,0	0/0:21,0:21:39.13:0,39,1452	0/0:26,0:26:63.22:0,63,2218	0/0:54,0:54:99:0,123,4371	1/1:10,9:19:18.06:419,18,0	0/1:7,9:13:56.59:431,0,57	1/1:4,12:16:27.09:615,27,0	1/1:14,11:25:15.01:286,15,0	0/0:20,0:20:48.16:0,48,1755	0/0:9,0:9:15.05:0,15,505	0/0:34,0:34:75.26:0,75,2727	0/0:21,0:21:42.14:0,42,1560	1/1:7,17:23:48.15:1071,48,0	1/1:8,15:22:42.14:976,42,0	1/1:3,6:9:12.04:267,12,0
chr10	39325783	.	CCTT	C	5791.82	PASS	AB=0.823;AC=22;AF=0.393;AN=56;BaseQRankSum=18.181;DP=864;FS=27.439;HRun=0;HaplotypeScore=142.4702;InbreedingCoeff=-0.6486;MQ=55.78;MQ0=5;MQRankSum=-15.740;QD=7.87;ReadPosRankSum=8.261;VQSLOD=2.4453;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:37,13:46:99:321,0,2221	0/0:9,0:9:27.09:0,27,618	0/1:35,4:35:94.60:95,0,1613	0/1:29,5:25:99:112,0,1044	0/1:27,5:32:99:213,0,1493	0/1:23,6:28:99:171,0,1500	0/0:27,0:27:72.22:0,72,1530	0/0:26,0:26:63.20:0,63,1329	0/1:22,2:24:32.83:33,0,1364	0/1:26,5:31:99:162,0,1559	0/0:20,0:20:54.19:0,54,1227	0/1:20,4:23:83.74:84,0,1260	0/1:28,8:36:99:300,0,1758	0/1:28,6:34:99:209,0,1678	0/1:23,9:31:99:313,0,1475	0/1:30,17:47:99:726,0,1892	0/1:26,23:48:99:882,0,1640	0/1:22,5:27:99:174,0,1436	0/1:18,8:25:99:291,0,823	0/0:22,1:23:18.21:0,18,1441	0/1:52,12:62:99:381,0,3067	0/1:20,5:25:99:180,0,1264	0/1:21,3:24:80.80:81,0,1342	0/1:32,15:46:99:528,0,2057	0/0:22,1:22:18.21:0,18,1337	0/1:19,3:21:96.21:96,0,1036	0/1:22,6:28:99:222,0,1407	0/1:7,5:12:99:219,0,448
chr10	39326348	.	TCACACACA	T	5004.35	PASS	AB=0.776;AC=21;AF=0.375;AN=56;BaseQRankSum=5.296;DP=625;FS=16.425;HRun=0;HaplotypeScore=175.7406;InbreedingCoeff=0.6435;MQ=61.71;MQ0=13;MQRankSum=-4.449;QD=19.78;ReadPosRankSum=2.751;VQSLOD=3.4641;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:22:5.58:0,6,189	1/1:4,4:8:12.04:278,12,0	0/0:39,0:25:9.03:0,9,163	0/0:36,0:24:15.05:0,15,263	1/1:7,12:19:18.06:454,18,0	0/1:17,0:22:9.85:10,0,19	0/1:10,0:19:25.27:35,0,25	0/0:37,0:37:43.86:0,44,1064	0/1:12,3:15:26.95:215,0,27	0/0:21,0:19:48.16:0,48,1411	0/0:16,0:13:2.93:0,3,104	1/1:8,11:19:30.10:694,30,0	0/0:20,0:20:12.04:0,12,297	0/0:15,0:18:6.02:0,6,209	1/1:16,16:33:45.15:1095,45,0	1/1:7,18:25:41.39:999,41,0	1/1:17,12:29:15.05:378,15,0	0/0:10,0:9:9.92:0,10,262	0/0:25,0:25:36.63:0,37,951	0/0:23,0:23:8.71:0,9,322	0/0:22,0:21:3.01:0,3,47	1/1:7,7:15:12.04:263,12,0	1/1:18,7:25:9.03:227,9,0	1/1:17,7:24:14.71:356,15,0	0/0:16,0:27:39:0,39,419	0/0:20,0:21:25.14:0,25,1071	0/0:18,0:19:18.06:0,18,604	0/0:14,0:14:12.04:0,12,353
chr10	39327725	.	AAC	A	2919.08	PASS	AB=0.885;AC=35;AF=0.673;AN=52;BaseQRankSum=-1.116;DP=606;FS=6.502;HRun=0;HaplotypeScore=111.6018;InbreedingCoeff=0.6234;MQ=53.42;MQ0=11;MQRankSum=0.756;QD=7.52;ReadPosRankSum=2.012;VQSLOD=2.6302;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:20.99:0,21,264	1/1:3,7:10:3:36,3,0	0/0:42,0:22:20.12:0,20,179	0/0:43,0:20:17.73:0,18,238	1/1:1,19:18:14.88:156,15,0	1/1:5,12:16:6.02:71,6,0	1/1:4,12:15:9.03:107,9,0	1/1:13,0:21:29.61:161,30,0	1/1:12,18:28:14.41:150,14,0	0/0:24,0:23:35.07:0,35,325	./.	1/1:16,6:21:45.14:529,45,0	0/0:22,0:22:19:0,19,150	0/0:20,0:20:9.40:0,9,45	1/1:9,21:31:20.68:227,21,0	1/1:14,3:17:36.10:416,36,0	1/1:20,9:30:56.92:611,57,0	0/1:14,0:14:16.16:16,0,37	1/1:6,0:13:12.23:117,12,0	1/1:15,0:17:2.84:14,3,0	./.	1/1:8,10:18:9.03:107,9,0	1/1:9,15:23:9.03:107,9,0	0/1:21,0:20:9.72:10,0,39	1/1:3,15:18:8.86:85,9,0	0/1:8,0:15:0.56:77,0,1	1/1:5,0:10:19.60:103,20,0	0/0:3,0:3:1.82:0,2,5
chr10	39327747	.	CAT	C	746	PASS	AB=1.000;AC=29;AF=0.558;AN=52;BaseQRankSum=3.746;DP=588;FS=0.000;HRun=0;HaplotypeScore=110.6533;InbreedingCoeff=-0.0286;MQ=45.66;MQ0=44;MQRankSum=0.638;QD=1.86;ReadPosRankSum=6.312;VQSLOD=1.4565;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:16.50:0,17,122	1/1:9,0:8:2.44:10,2,0	0/0:47,0:10:7.59:0,8,134	0/0:48,0:10:23.87:0,24,246	0/1:24,0:20:26.04:29,0,26	1/1:16,0:15:5.36:21,5,0	1/1:16,0:15:8.03:32,8,0	0/1:17,0:15:7.74:10,0,8	0/1:24,0:22:25.70:26,0,38	0/1:19,0:17:33.24:35,0,33	./.	1/1:24,0:19:41.14:181,41,0	0/1:19,0:18:6.91:81,0,7	1/1:22,0:19:8.80:44,9,0	0/1:27,0:26:16.08:51,0,16	0/1:17,0:15:0.30:99,0,0	0/1:33,0:29:57.04:130,0,57	0/1:15,0:15:7.72:8,0,14	0/0:16,0:14:4.93:0,5,26	0/0:16,0:7:2.50:0,2,9	./.	0/1:24,0:22:14.19:14,0,105	1/1:22,0:18:1.58:34,2,0	1/1:3,21:23:3.01:43,3,0	0/1:21,0:20:10.27:16,0,10	1/1:14,0:9:0.23:11,0,0	1/1:15,0:12:2.96:20,3,0	0/0:2,0:2:1.82:0,2,5
chr10	39327751	.	TACAC	T	1634.82	PASS	AB=0.770;AC=13;AF=0.250;AN=52;BaseQRankSum=2.969;DP=554;FS=6.621;HRun=0;HaplotypeScore=110.7829;InbreedingCoeff=0.5974;MQ=44.91;MQ0=45;MQRankSum=-5.231;QD=12.87;ReadPosRankSum=0.721;VQSLOD=2.7986;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:7,23:30:2.92:0,3,17	0/0:8,0:7:3.01:0,3,39	0/0:38,0:5:11.83:0,12,162	0/0:45,0:10:21.05:0,21,360	0/0:22,0:17:21.07:0,21,403	0/0:16,0:15:5.91:0,6,55	0/0:16,0:15:9.97:0,10,118	1/1:15,0:13:24.02:307,24,0	0/0:25,0:23:20.81:0,21,377	1/1:3,15:15:36.12:603,36,0	0/0:5,8:11:0:0,0,0	0/0:25,0:20:33.36:0,33,634	0/1:16,3:18:57.98:143,0,58	0/1:18,2:17:1.11:29,0,1	0/0:26,0:25:30.57:0,31,545	0/0:16,0:14:38.16:0,38,659	0/0:30,0:26:46.43:0,46,1064	0/1:2,12:14:5.78:48,0,6	1/1:13,2:13:24.03:293,24,0	./.	./.	0/0:23,0:21:30.10:0,30,702	0/0:20,0:16:11.99:0,12,188	0/0:24,0:23:3.01:0,3,33	0/0:21,0:20:12.51:0,13,212	1/1:9,3:7:14.94:178,15,0	1/1:8,6:11:15.01:202,15,0	0/0:2,0:2:1.25:0,1,3
chr10	39327759	.	CAG	C	33.58	PASS	AB=0.983;AC=12;AF=0.316;AN=38;BaseQRankSum=5.415;DP=519;FS=3.844;HRun=0;HaplotypeScore=95.7591;InbreedingCoeff=0.0954;MQ=43.37;MQ0=50;MQRankSum=-4.780;QD=0.24;ReadPosRankSum=0.329;VQSLOD=1.5249;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:0:0,0,0	./.	./.	./.	0/0:21,1:16:15.05:0,15,207	1/1:15,0:13:0.89:2,1,0	./.	0/0:14,0:10:2.90:0,3,17	0/0:20,1:20:12.04:0,12,173	1/1:20,0:16:1.59:14,2,0	./.	0/1:22,1:18:34.25:34,0,122	0/1:14,0:13:14.29:14,0,24	./.	0/0:25,0:25:15.03:0,15,200	0/1:15,0:14:10.03:10,0,237	0/0:27,2:25:0.42:0,0,449	0/1:16,0:15:1.68:8,0,2	0/1:11,0:9:8.56:9,0,10	./.	./.	0/0:20,2:21:27.08:0,27,385	0/0:19,0:14:5.98:0,6,66	0/0:22,1:22:2.04:0,2,6	0/0:22,0:20:5.98:0,6,66	0/1:12,0:8:7.91:9,0,8	1/1:15,0:11:7.06:46,7,0	./.
chr10	39327787	.	GAGAC	G	419.09	PASS	AB=1.000;AC=20;AF=0.476;AN=42;BaseQRankSum=3.705;DP=405;FS=4.081;HRun=0;HaplotypeScore=80.2800;InbreedingCoeff=0.4618;MQ=40.85;MQ0=45;MQRankSum=-5.844;QD=2.51;ReadPosRankSum=-1.595;VQSLOD=1.1064;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:19:0.47:1,0,0	./.	./.	./.	0/0:24,0:13:15.04:0,15,328	1/1:12,0:8:3:25,3,0	./.	0/1:10,0:4:3.34:4,0,3	0/1:20,0:18:3.63:4,0,303	0/1:14,0:10:12.65:13,0,14	0/0:8,0:5:0:0,0,0	0/1:15,0:14:10.61:11,0,260	1/1:13,2:14:16.52:199,17,0	1/1:14,0:10:5.79:41,6,0	0/0:21,0:20:21.03:0,21,401	0/0:15,0:14:35.83:0,36,439	0/0:25,0:22:7.84:0,8,859	1/1:15,0:14:1.61:22,2,0	1/1:9,0:7:14.69:97,15,0	./.	./.	0/0:23,0:21:35.67:0,36,639	0/0:18,0:12:6.02:0,6,118	0/0:27,0:24:20.94:0,21,217	0/0:19,0:13:8.07:0,8,98	1/1:8,1:6:4.85:38,5,0	1/1:13,0:10:10.84:109,11,0	./.
chr10	39327789	.	GAC	G	374.95	PASS	AB=1.000;AC=21;AF=0.525;AN=40;BaseQRankSum=3.833;DP=391;FS=5.369;HRun=0;HaplotypeScore=76.3348;InbreedingCoeff=0.3790;MQ=40.65;MQ0=44;MQRankSum=-6.024;QD=2.02;ReadPosRankSum=-1.816;VQSLOD=0.9784;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:17:0.89:2,1,0	./.	./.	./.	0/0:24,0:13:15.04:0,15,251	1/1:12,0:8:3:25,3,0	./.	0/1:9,0:4:4.21:30,0,4	0/1:21,0:19:4.10:4,0,199	0/1:12,0:8:7.48:7,0,27	./.	0/1:15,0:14:17.01:17,0,190	1/1:15,0:14:13.48:96,13,0	1/1:14,0:10:5.90:41,6,0	0/0:20,0:19:20.77:0,21,287	0/0:15,0:14:26.31:0,26,342	0/1:24,0:21:6.38:6,0,599	1/1:16,0:15:1.04:26,1,0	1/1:7,2:7:14.84:109,15,0	./.	./.	0/0:24,0:22:35.60:0,36,481	0/0:18,0:12:6.02:0,6,90	0/0:27,0:24:20.83:0,21,152	0/0:18,0:12:7.60:0,8,74	1/1:7,1:5:4.67:40,5,0	1/1:6,6:10:11.25:115,11,0	./.
chr10	39327815	.	C	CAG	388.74	PASS	AB=0.893;AC=14;AF=0.292;AN=48;BaseQRankSum=1.796;DP=382;FS=0.956;HRun=0;HaplotypeScore=66.8847;InbreedingCoeff=0.2812;MQ=43.44;MQ0=41;MQRankSum=-0.216;QD=3.70;ReadPosRankSum=-0.705;VQSLOD=1.7676;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:11,0:7:14.12:30,0,14	0/0:9,0:8:11.98:0,12,117	./.	./.	0/0:32,0:27:2.26:0,2,363	./.	0/0:6,0:3:1.72:0,2,4	1/1:6,0:2:0.94:2,1,0	0/1:17,0:16:13.94:126,0,14	1/1:4,0:2:3:27,3,0	./.	0/1:5,15:20:15.61:212,0,16	1/1:12,0:10:2.58:13,3,0	0/1:20,0:17:9.02:9,0,41	0/0:20,0:20:26.50:0,26,261	0/0:12,0:13:17.71:0,18,164	0/0:32,0:29:39.05:0,39,422	1/1:12,0:10:11.34:94,11,0	0/0:4,0:2:2.60:0,3,10	0/0:8,0:1:1.55:0,2,4	0/0:11,0:6:0:0,0,0	0/0:21,0:21:29.27:0,29,241	0/0:22,0:19:17.65:0,18,164	0/0:24,0:24:35.48:0,35,346	0/0:25,0:21:31.22:0,31,245	1/1:3,0:2:1.55:4,2,0	0/0:6,0:5:3.26:0,3,11	0/0:13,0:6:2.19:0,2,9
chr10	39327843	.	GAGAC	G	2441.21	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-1.061;DP=540;FS=15.478;HRun=0;HaplotypeScore=94.1202;InbreedingCoeff=0.8826;MQ=62.23;MQ0=22;MQRankSum=-4.093;QD=12.58;ReadPosRankSum=-5.555;VQSLOD=0.1000;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:13:18.40:140,18,0	0/0:11,0:11:26.99:0,27,433	0/0:33,0:19:43.76:0,44,479	0/0:52,0:22:13.62:0,14,239	0/0:39,0:37:93.03:0,93,1517	0/0:9,0:6:9.44:0,9,72	0/0:11,0:9:14.96:0,15,122	1/1:1,16:16:45.23:346,45,0	0/0:14,0:13:20.63:0,21,233	1/1:10,0:9:24.26:203,24,0	1/1:18,0:17:41.91:343,42,0	0/0:24,0:24:32.84:0,33,488	1/1:18,0:16:35.69:290,36,0	1/1:20,1:20:6.90:92,7,0	0/0:19,0:19:36.05:0,36,697	0/0:19,0:18:44.89:0,45,615	0/0:24,0:24:50.95:0,51,1054	1/1:12,0:11:4.60:99,5,0	1/1:19,0:16:41:337,41,0	1/1:13,0:13:20.96:200,21,0	1/1:15,0:12:2.99:23,3,0	0/0:23,0:22:33.48:0,33,726	0/0:22,0:21:38.80:0,39,616	0/0:21,0:20:0.05:0,0,771	0/0:25,0:24:51:0,51,787	1/1:14,0:13:38.88:326,39,0	1/1:8,1:7:12:156,12,0	1/1:13,1:5:9.45:103,9,0
chr10	39327845	.	GAC	G	2691.60	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=0.568;DP=540;FS=8.531;HRun=0;HaplotypeScore=80.1071;InbreedingCoeff=0.9465;MQ=62.43;MQ0=20;MQRankSum=-4.326;QD=14.02;ReadPosRankSum=-3.492;VQSLOD=1.5258;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,2:13:13.30:148,13,0	0/0:11,0:11:26.99:0,27,367	0/0:33,0:19:43.70:0,44,442	0/0:52,0:22:14.22:0,14,239	0/0:40,0:38:85.25:0,85,1165	0/0:11,0:8:17.96:0,18,144	0/0:11,0:9:14.96:0,15,124	1/1:16,0:15:44.76:344,45,0	0/0:15,0:14:19.55:0,20,230	1/1:10,1:10:29.97:305,30,0	1/1:18,0:17:41.91:343,42,0	0/0:24,0:24:32.96:0,33,344	1/1:17,1:16:35.71:287,36,0	1/1:3,17:19:17.97:222,18,0	0/0:18,0:18:23.58:0,24,500	0/0:19,0:18:19.80:0,20,433	0/0:23,0:23:32.95:0,33,784	1/1:11,1:11:14.47:239,14,0	1/1:20,0:18:43.96:326,44,0	1/1:14,0:14:20.50:167,21,0	1/1:14,0:11:2.99:23,3,0	0/0:23,0:22:44.98:0,45,600	0/0:22,0:21:28.91:0,29,447	0/0:20,0:19:17.87:0,18,550	0/0:26,0:25:27.95:0,28,606	1/1:15,0:14:41.89:353,42,0	1/1:9,0:7:11.91:92,12,0	1/1:11,0:4:8.96:68,9,0
chr10	39327924	.	G	GTGACGCTC	2677.23	PASS	AB=0.577;AC=11;AF=0.204;AN=54;BaseQRankSum=-5.470;DP=608;FS=71.732;HRun=0;HaplotypeScore=138.9912;InbreedingCoeff=0.7723;MQ=59.35;MQ0=6;MQRankSum=-6.370;QD=44.62;ReadPosRankSum=-0.413;VQSLOD=0.6665;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,105,3001	0/0:7,0:7:21.05:0,21,542	0/0:29,0:24:72.19:0,72,1930	0/0:31,0:28:84.29:0,84,2420	0/0:47,0:47:99:0,132,3707	0/0:21,0:21:63.22:0,63,1807	0/0:24,0:24:69.24:0,69,1999	1/1:1,1:3:6.01:77,6,0	0/0:18,0:18:48.15:0,48,1342	0/0:35,0:35:99:0,102,2909	0/0:20,0:20:51.18:0,51,1478	0/0:20,0:20:57.20:0,57,1630	0/0:28,0:27:75.24:0,75,2032	0/0:21,0:21:54.17:0,54,1517	0/0:26,0:26:75.26:0,75,2166	0/0:15,0:15:42.14:0,42,1192	0/0:30,0:29:84.23:0,84,2391	0/0:17,0:15:42.14:0,42,1230	1/1:8,1:3:3.01:135,3,0	1/1:3,8:11:24.08:1073,24,0	./.	0/0:29,0:29:87.30:0,87,2536	0/0:17,0:17:51.18:0,51,1464	0/0:34,0:34:87.19:0,87,2410	0/0:33,0:33:99:0,99,2896	0/1:4,8:10:57.73:869,0,58	1/1:3,7:4:5.53:270,6,0	1/1:4,3:4:9.03:406,9,0
chr10	39329058	.	A	AAATG	1576.82	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-3.840;DP=598;FS=2.826;HRun=0;HaplotypeScore=97.1126;InbreedingCoeff=0.9281;MQ=73.15;MQ0=0;MQRankSum=-1.373;QD=36.67;ReadPosRankSum=2.214;VQSLOD=3.4543;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:42.13:0,42,672	0/0:5,0:5:6.01:0,6,75	0/0:22,0:21:30.07:0,30,445	0/0:13,0:13:12.04:0,12,184	0/0:23,0:23:45.15:0,45,749	0/0:22,0:22:39.12:0,39,624	0/0:23,0:23:63.12:0,63,895	0/0:41,0:40:84.22:0,84,1192	0/0:16,0:16:33.10:0,33,518	0/0:24,0:24:39.12:0,39,624	0/0:18,0:18:33.09:0,33,502	0/0:28,0:28:63.17:0,63,996	1/1:8,18:27:42.14:1033,42,0	1/1:4,11:16:27.09:665,27,0	0/0:30,0:30:45.15:0,45,726	0/0:30,0:30:45.12:0,45,677	0/0:13,0:13:33.09:0,33,516	0/0:17,0:17:33.10:0,33,523	0/0:18,0:18:30.10:0,30,477	0/0:25,0:25:57.19:0,57,949	0/0:23,0:23:45.14:0,45,724	0/0:19,0:19:42.14:0,42,699	0/0:22,0:22:51.11:0,51,706	0/0:29,0:29:69.18:0,69,1092	0/0:14,0:14:27.07:0,27,394	0/0:30,0:30:66.18:0,66,979	0/0:23,0:23:29.76:0,30,404	0/0:7,0:7:18.06:0,18,300
chr10	39332006	.	GAC	G	8233.88	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=17.836;DP=869;FS=2.991;HRun=0;HaplotypeScore=132.9259;InbreedingCoeff=0.9971;MQ=84.10;MQ0=0;MQRankSum=-7.259;QD=38.48;ReadPosRankSum=0.676;VQSLOD=6.6419;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,147,2790	0/0:14,0:14:39.13:0,39,753	0/0:26,0:26:74.70:0,75,1280	0/0:27,0:27:75.19:0,75,1284	0/0:22,0:22:63.22:0,63,1206	0/0:25,0:25:75.26:0,75,1449	0/0:22,0:22:66.23:0,66,1275	1/1:2,31:33:93.30:1392,93,0	0/0:35,0:35:99:0,105,1976	0/0:31,0:31:90.31:0,90,1739	0/0:24,0:24:72.25:0,72,1381	0/0:44,0:44:99:0,132,2516	0/0:43,0:43:99:0,126,2388	0/0:25,0:25:72.25:0,72,1378	0/0:42,0:42:99:0,126,2415	0/0:41,0:41:99:0,123,2310	0/0:33,0:33:93.32:0,93,1744	0/0:26,0:26:78.23:0,78,1470	1/1:2,23:23:63.21:957,63,0	1/1:0,33:33:75.25:1148,75,0	1/1:0,50:50:99:1746,115,0	0/0:30,0:30:90.31:0,90,1720	0/0:27,0:27:81.28:0,81,1564	0/0:28,0:28:84.29:0,84,1607	0/0:40,0:40:99:0,117,2259	1/1:1,35:36:50.41:1522,50,0	1/1:2,30:32:81.28:1240,81,0	1/1:0,5:5:15.05:229,15,0
chr10	39333116	.	G	GA	1952.84	PASS	AB=1.000;AC=16;AF=0.364;AN=44;BaseQRankSum=-7.024;DP=340;FS=3.056;HRun=11;HaplotypeScore=57.3604;InbreedingCoeff=0.7349;MQ=94.16;MQ0=2;MQRankSum=2.504;QD=12.52;ReadPosRankSum=-1.630;VQSLOD=3.0558;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	0/0:7,0:7:14.94:0,15,116	0/1:44,0:35:25.29:25,0,127	0/0:32,0:24:4.87:0,5,91	0/0:26,0:27:64.74:0,65,488	0/0:17,0:17:50.81:0,51,395	0/0:13,0:13:38.85:0,39,302	1/1:6,23:31:74.75:699,75,0	0/0:10,0:11:22.95:0,23,168	./.	./.	0/1:3,0:3:15.04:15,0,37	./.	./.	0/0:9,0:10:19.96:0,20,145	0/0:6,0:6:11.93:0,12,93	0/0:26,0:28:70.71:0,71,532	./.	1/1:4,11:15:11.32:267,11,0	1/1:1,8:10:6.66:235,7,0	1/1:3,7:11:14.86:136,15,0	0/0:6,0:6:17.93:0,18,139	0/0:10,0:10:20.87:0,21,162	0/0:5,0:6:13.99:0,14,99	0/0:10,0:11:25.92:0,26,188	1/1:0,9:9:27.05:274,27,0	1/1:4,13:19:16.03:310,16,0	1/1:3,9:13:17.87:166,18,0
chr10	39333568	.	CTG	C	5046.87	PASS	AB=1.000;AC=27;AF=0.482;AN=56;BaseQRankSum=-6.594;DP=650;FS=2.383;HRun=0;HaplotypeScore=111.5575;InbreedingCoeff=0.8013;MQ=63.60;MQ0=16;MQRankSum=7.763;QD=15.77;ReadPosRankSum=5.846;VQSLOD=4.9239;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:5.44:0,5,43	1/1:1,5:6:9.03:104,9,0	0/0:43,0:23:12.01:0,12,144	0/0:45,0:30:31.40:0,31,379	1/1:7,16:24:40.97:404,41,0	1/1:7,15:23:35.92:397,36,0	1/1:6,18:26:47.81:515,48,0	0/0:40,0:35:27.56:0,28,286	1/1:7,21:28:4.15:489,4,0	0/0:10,0:10:14.99:0,15,139	0/0:8,0:8:0:0,0,0	1/1:8,15:25:47.64:494,48,0	0/0:2,0:17:3:0,3,26	0/0:1,0:19:12.65:0,13,92	1/1:7,17:24:36.41:398,36,0	1/1:7,20:28:32.83:362,33,0	1/1:14,22:39:21.72:636,22,0	0/1:11,0:11:2.04:2,0,31	0/0:21,0:19:19.39:0,19,221	0/0:14,0:12:3:0,3,25	0/0:39,0:39:15.23:0,15,101	1/1:8,8:16:18:193,18,0	1/1:5,11:17:23.90:258,24,0	1/1:9,25:35:47.97:536,48,0	1/1:4,10:15:23.90:258,24,0	0/0:22,0:21:27.71:0,28,319	0/0:25,0:24:26.44:0,26,224	0/0:4,0:4:2.96:0,3,19
chr10	39333771	.	TTC	T	1995.76	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=9.049;DP=648;FS=6.331;HRun=0;HaplotypeScore=84.3141;InbreedingCoeff=0.8697;MQ=54.91;MQ0=38;MQRankSum=-6.332;QD=14.36;ReadPosRankSum=-5.116;VQSLOD=1.5080;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:44:99:0,110,1311	0/0:4,0:4:9.03:0,9,125	0/0:41,0:8:14.46:0,14,106	0/0:50,0:12:16.56:0,17,112	0/0:39,0:39:71.50:0,71,857	0/0:22,0:22:37.97:0,38,589	0/0:20,0:20:56.25:0,56,614	1/1:33,2:33:54.79:514,55,0	0/0:15,0:14:37.88:0,38,431	0/0:20,0:19:50.99:0,51,644	0/0:22,0:21:56.96:0,57,706	0/0:15,0:14:38.49:0,38,378	0/0:19,0:17:33.04:0,33,530	0/0:15,0:15:26.27:0,26,358	0/0:17,0:17:36.89:0,37,567	0/0:20,0:20:53.96:0,54,662	0/0:39,0:38:55.30:0,55,859	0/0:24,0:21:54.27:0,54,523	1/1:22,0:19:36.24:317,36,0	1/1:30,2:32:79.38:619,79,0	1/1:5,0:5:2.98:21,3,0	0/0:14,0:13:1.28:0,1,154	0/0:19,0:18:49.08:0,49,541	0/0:21,0:21:54.61:0,55,703	0/0:27,0:25:67.14:0,67,764	1/1:23,2:23:53.45:422,53,0	1/1:11,0:10:18.93:173,19,0	1/1:8,1:8:1.53:112,2,0
chr10	39333772	.	TC	T	2597.39	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=8.227;DP=649;FS=5.226;HRun=1;HaplotypeScore=73.1574;InbreedingCoeff=0.9055;MQ=52.90;MQ0=40;MQRankSum=-6.638;QD=18.96;ReadPosRankSum=-5.030;VQSLOD=2.2734;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:46:99:0,113,1040	0/0:5,0:4:9.02:0,9,94	0/0:41,0:8:14.33:0,14,102	0/0:48,0:10:16.82:0,17,125	0/0:38,0:38:55.13:0,55,670	0/0:22,0:22:36.31:0,36,462	0/0:20,0:20:47.96:0,48,437	1/1:27,7:32:71.73:593,72,0	0/0:15,0:14:36.04:0,36,328	0/0:20,0:19:50.94:0,51,511	0/0:22,0:21:56.86:0,57,551	0/0:16,0:15:31.16:0,31,295	0/0:19,0:17:26.93:0,27,387	0/0:15,0:15:26.03:0,26,280	0/0:17,0:17:36.86:0,37,451	0/0:20,0:20:53.58:0,54,507	0/0:40,0:39:48.33:0,48,603	0/0:25,0:21:50.66:0,51,404	1/1:13,7:17:43.90:404,44,0	1/1:22,11:33:89.33:843,89,0	1/1:0,5:5:3.01:41,3,0	0/0:14,0:13:0.23:0,0,130	0/0:19,0:18:32.91:0,33,412	0/0:21,0:21:54.06:0,54,542	0/0:27,0:25:55.64:0,56,595	1/1:22,3:23:60.55:448,61,0	1/1:5,6:10:29.16:320,29,0	1/1:8,1:8:19.14:138,19,0
chr10	39334355	.	T	TA	2739.79	PASS	AB=0.759;AC=14;AF=0.250;AN=56;BaseQRankSum=-9.595;DP=562;FS=0.868;HRun=11;HaplotypeScore=67.0059;InbreedingCoeff=0.7207;MQ=79.11;MQ0=0;MQRankSum=-0.410;QD=15.39;ReadPosRankSum=-2.783;VQSLOD=3.3676;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:2,0:18:26.48:0,26,76	0/1:9,1:10:3.55:4,0,159	0/0:17,0:18:15.26:0,15,163	0/1:12,0:12:10.13:10,0,73	0/0:26,1:28:28.29:0,28,392	0/0:15,0:15:38.85:0,39,302	0/0:18,0:19:43.85:0,44,328	1/1:8,15:24:59.14:550,59,0	0/0:19,0:19:44.74:0,45,344	0/0:3,0:25:44.46:0,44,133	0/0:1,0:15:26.48:0,26,77	0/0:18,0:18:41.79:0,42,324	0/0:16,0:16:32.81:0,33,255	0/0:22,0:23:43.80:0,44,331	0/0:17,0:17:35.79:0,36,279	0/0:28,0:28:62.70:0,63,486	0/0:22,0:22:56.69:0,57,433	0/0:1,0:16:26.48:0,26,76	0/1:5,10:16:5.33:277,0,5	1/1:4,22:26:53.99:517,54,0	1/1:3,16:19:33.07:335,33,0	0/0:19,1:20:17.35:0,17,317	0/0:15,0:15:32.83:0,33,255	0/0:27,0:28:45.02:0,45,436	0/0:22,0:24:29.20:0,29,330	1/1:5,23:28:30.19:632,30,0	1/1:3,24:28:42.39:411,42,0	0/1:2,13:15:0.74:188,0,1
chr10	39334648	.	A	AT	5348.15	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=14.778;DP=737;FS=1.617;HRun=0;HaplotypeScore=86.2260;InbreedingCoeff=0.9912;MQ=75.70;MQ0=0;MQRankSum=-2.024;QD=41.46;ReadPosRankSum=3.505;VQSLOD=5.4952;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,48:49:99:2012,135,0	0/0:19,0:19:51.16:0,51,694	0/0:22,0:22:51.11:0,51,634	0/0:10,0:10:26.95:0,27,330	0/0:19,0:19:57.14:0,57,756	0/0:18,0:18:48.16:0,48,671	0/0:28,0:28:84.24:0,84,1147	0/0:43,0:43:99:0,126,1743	0/0:21,0:21:60.19:0,60,838	1/1:0,32:32:93.30:1366,93,0	1/1:1,26:27:75.17:1121,75,0	0/0:29,0:29:84.26:0,84,1154	0/0:18,0:18:54.18:0,54,754	0/0:23,0:23:69.23:0,69,964	0/0:38,0:38:99:0,114,1594	0/0:29,0:29:87.26:0,87,1180	0/0:48,0:48:99:0,138,1910	1/1:1,20:21:57.17:850,57,0	0/0:19,0:19:54.16:0,54,723	0/0:28,0:28:84.28:0,84,1172	0/0:37,0:37:99:0,105,1468	0/0:21,0:21:63.21:0,63,881	0/0:15,0:15:45.14:0,45,612	0/0:32,0:32:96.32:0,96,1340	0/0:14,0:14:42.14:0,42,587	0/0:35,0:35:99:0,102,1392	0/0:38,0:38:99:0,114,1554	0/0:4,0:4:12.04:0,12,168
chr10	39334787	.	CAGAGAGAGAGAGAG	C	2020.37	PASS	AB=1.000;AC=21;AF=0.389;AN=54;BaseQRankSum=6.460;DP=629;FS=9.534;HRun=0;HaplotypeScore=211.5614;InbreedingCoeff=0.7310;MQ=69.49;MQ0=14;MQRankSum=-0.760;QD=8.28;ReadPosRankSum=0.911;VQSLOD=1.7392;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:32,7:39:5.98:137,6,0	0/0:4,0:4:6.02:0,6,312	0/0:42,0:21:3.48:0,3,54	0/0:64,0:20:3.01:0,3,64	0/0:21,0:21:27.09:0,27,1311	0/0:11,0:12:21.07:0,21,652	0/0:21,0:23:18.06:0,18,562	0/1:25,0:25:2.36:27,0,2	0/0:17,0:17:24:0,24,1273	1/1:18,5:22:7.65:225,8,0	1/1:13,1:14:6.01:141,6,0	0/0:18,0:20:18.06:0,18,924	1/1:14,3:17:9.03:298,9,0	1/1:18,5:23:3:117,3,0	0/0:25,0:25:27.09:0,27,1427	0/0:18,0:18:22.43:0,22,931	0/0:35,0:35:61.09:0,61,3030	1/1:13,2:14:3.01:117,3,0	0/0:17,0:16:2.22:0,2,7	1/1:13,6:19:8.39:238,8,0	1/1:29,0:28:18.99:280,19,0	0/0:13,0:13:15.05:0,15,511	0/0:18,0:18:18.06:0,18,835	0/0:31,0:34:69.24:0,69,3569	0/0:16,0:16:15.05:0,15,664	1/1:16,10:26:19.67:354,20,0	1/1:10,0:13:11.58:273,12,0	./.
chr10	39335367	.	C	CG	899.15	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=2.184;DP=617;FS=7.632;HRun=1;HaplotypeScore=86.9641;InbreedingCoeff=0.7092;MQ=51.97;MQ0=25;MQRankSum=-4.214;QD=22.48;ReadPosRankSum=-1.176;VQSLOD=2.8328;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:45:99:0,100,1335	0/0:13,0:10:30.05:0,30,355	0/0:5,0:3:5.99:0,6,54	0/1:4,0:3:11.74:12,0,25	0/0:22,0:22:45:0,45,490	0/0:19,0:19:45.05:0,45,534	0/0:18,0:16:35.92:0,36,386	0/0:26,0:23:51.95:0,52,603	0/0:14,0:14:33.02:0,33,327	0/0:30,0:28:84.14:0,84,1013	0/0:20,0:20:53.89:0,54,644	0/0:14,0:13:33.10:0,33,410	1/1:8,10:18:36.11:499,36,0	1/1:7,11:18:6.81:508,7,0	0/0:25,0:24:60.05:0,60,686	0/0:30,0:29:72.19:0,72,900	0/0:35,0:33:78.13:0,78,938	0/0:25,0:24:68.96:0,69,769	0/0:15,0:15:42.09:0,42,497	0/0:21,0:20:38.99:0,39,424	0/0:20,0:18:42.10:0,42,502	0/0:31,0:31:81.18:0,81,987	0/0:22,0:20:60.07:0,60,724	0/0:33,0:32:84.02:0,84,1036	0/0:27,0:25:69.11:0,69,873	0/0:22,0:21:60.13:0,60,681	0/0:31,0:31:66.17:0,66,790	0/0:10,0:8:21.07:0,21,269
chr10	39335381	.	CA	C	1928.89	PASS	AB=0.877;AC=11;AF=0.196;AN=56;BaseQRankSum=2.183;DP=672;FS=8.591;HRun=11;HaplotypeScore=87.4739;InbreedingCoeff=0.6972;MQ=55.64;MQ0=22;MQRankSum=-0.143;QD=11.69;ReadPosRankSum=2.838;VQSLOD=2.9840;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:11,36:44:92.70:763,93,0	0/0:14,0:11:30.05:0,30,304	0/0:8,0:5:12.86:0,13,113	0/1:7,1:6:39.69:40,0,62	0/0:22,2:24:26.44:0,26,466	0/0:17,0:18:44.97:0,45,455	0/1:11,3:14:37.53:38,0,240	0/0:14,0:31:37.35:0,37,261	0/0:14,0:13:30:0,30,312	1/1:8,21:29:58.89:469,59,0	1/1:3,17:21:49.92:394,50,0	0/0:15,0:15:35.82:0,36,333	0/0:9,0:28:31.88:0,32,186	0/0:6,0:17:26.58:0,27,135	0/0:29,1:30:21.98:0,22,608	0/0:31,0:31:72.08:0,72,733	0/0:36,0:35:84.03:0,84,870	1/1:3,19:21:47.93:394,48,0	0/0:7,0:17:34.01:0,34,175	0/0:4,0:22:46.08:0,46,242	0/0:6,0:22:28.91:0,29,144	0/0:33,1:34:59.55:0,60,826	0/1:20,2:21:0.45:0,0,363	0/0:37,1:39:62.24:0,62,836	0/0:28,0:26:57.14:0,57,605	0/0:5,0:20:49.42:0,49,274	0/0:12,0:34:64.80:0,65,342	0/0:5,0:11:19.08:0,19,105
chr10	39335758	.	T	TA	4500.83	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-9.323;DP=705;FS=7.047;HRun=1;HaplotypeScore=68.0368;InbreedingCoeff=0.9999;MQ=86.41;MQ0=0;MQRankSum=1.358;QD=42.87;ReadPosRankSum=-0.136;VQSLOD=4.7384;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,27:27:78.26:1169,78,0	0/0:14,0:14:42.14:0,42,545	0/0:25,0:25:69.22:0,69,884	0/0:23,0:23:54.17:0,54,689	0/0:28,0:28:81.26:0,81,1051	0/0:33,0:33:99:0,99,1268	0/0:17,0:17:51.17:0,51,662	0/0:29,0:29:84.27:0,84,1091	0/0:21,0:21:60.18:0,60,765	1/1:0,25:25:75.25:1120,75,0	1/1:2,31:33:93.19:1313,93,0	0/0:23,0:23:63.20:0,63,818	0/0:29,0:29:87.25:0,87,1098	0/0:14,0:14:42.14:0,42,545	0/0:40,0:40:99:0,120,1544	0/0:37,0:37:99:0,111,1427	0/0:28,0:28:84.27:0,84,1091	1/1:0,20:20:60.20:899,60,0	0/0:17,0:17:51.17:0,51,662	0/0:25,0:25:63.19:0,63,802	0/0:20,0:20:60.18:0,60,765	0/0:27,0:27:81.26:0,81,1051	0/0:25,0:25:69.22:0,69,895	0/0:13,0:13:36.12:0,36,467	0/0:26,0:26:78.23:0,78,996	0/0:27,0:26:81.25:0,81,1027	0/0:28,0:28:75.21:0,75,944	0/0:31,0:30:93.30:0,93,1206
chr10	39335845	.	GA	G	4608.76	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=13.655;DP=701;FS=0.325;HRun=8;HaplotypeScore=71.3005;InbreedingCoeff=0.9839;MQ=75.65;MQ0=0;MQRankSum=-0.319;QD=25.05;ReadPosRankSum=-0.858;VQSLOD=5.1809;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:96.28:0,96,1147	0/0:11,0:11:33.10:0,33,398	0/0:25,0:25:45.22:0,45,583	0/0:15,0:14:6.96:0,7,198	0/0:23,0:23:69.19:0,69,814	0/0:29,0:29:75.21:0,75,887	0/0:16,0:16:39.10:0,39,452	1/1:1,24:25:72:663,72,0	0/0:21,0:21:54.12:0,54,609	0/0:30,0:30:84.26:0,84,1014	0/0:26,0:26:72.19:0,72,854	0/0:32,0:32:90.28:0,90,1087	0/0:28,0:28:78.22:0,78,919	0/0:21,0:21:62.68:0,63,734	0/0:35,0:35:96.23:0,96,1105	0/0:34,0:34:93.25:0,93,1091	0/0:26,0:26:75.22:0,75,895	0/0:15,0:15:35.75:0,36,410	1/1:1,21:22:60.06:569,60,0	1/1:5,37:42:99:1068,111,0	1/1:2,12:14:33.05:319,33,0	0/0:26,0:26:75.19:0,75,864	0/0:38,0:38:99:0,102,1232	0/0:13,0:13:30.09:0,30,362	0/0:21,0:21:63.19:0,63,761	1/1:1,24:25:38.88:658,39,0	1/1:3,35:38:90.14:869,90,0	1/1:0,18:18:48.08:463,48,0
chr10	39336144	.	G	GT	4158.20	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=12.103;DP=717;FS=2.987;HRun=0;HaplotypeScore=84.9843;InbreedingCoeff=0.9998;MQ=89.12;MQ0=0;MQRankSum=-2.423;QD=42.00;ReadPosRankSum=3.578;VQSLOD=4.3350;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,35:36:99:1485,99,0	0/0:11,0:11:33.11:0,33,462	0/0:29,0:29:87.26:0,87,1155	0/0:24,0:24:69.22:0,69,935	0/0:27,0:27:78.25:0,78,1074	0/0:20,0:20:60.19:0,60,822	0/0:16,0:16:48.16:0,48,671	0/0:35,0:35:99:0,102,1382	0/0:23,0:23:66.21:0,66,904	1/1:0,20:20:60.19:886,60,0	1/1:0,25:25:72.24:1068,72,0	0/0:29,0:29:87.29:0,87,1213	0/0:16,0:16:48.16:0,48,668	0/0:21,0:21:60.20:0,60,839	0/0:21,0:21:63.21:0,63,880	0/0:27,0:27:81.27:0,81,1133	0/0:30,0:30:90.30:0,90,1258	1/1:1,17:18:48.11:719,48,0	0/0:23,0:23:69.23:0,69,962	0/0:21,0:21:63.21:0,63,880	0/0:52,0:52:99:0,154,2138	0/0:21,0:21:63.21:0,63,880	0/0:24,0:24:69.21:0,69,945	0/0:34,0:34:99:0,99,1385	0/0:21,0:21:63.21:0,63,878	0/0:39,0:39:99:0,114,1580	0/0:44,0:43:99:0,129,1786	0/0:10,0:10:30.10:0,30,420
chr10	39337099	.	C	CAGG	9807.75	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-13.421;DP=639;FS=2.950;HRun=0;HaplotypeScore=88.5214;InbreedingCoeff=0.9994;MQ=79.76;MQ0=0;MQRankSum=-3.948;QD=57.36;ReadPosRankSum=-1.122;VQSLOD=6.5685;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:96.33:0,96,1566	0/0:8,0:8:24.08:0,24,392	0/0:25,0:25:66.23:0,66,1070	0/0:17,0:17:32.67:0,33,662	0/0:21,0:21:60.19:0,60,956	0/0:21,0:21:60.20:0,60,980	0/0:24,0:24:66.23:0,66,1078	1/1:5,23:29:78.23:1607,78,0	0/0:20,0:20:57.17:0,57,905	0/0:19,0:19:57.15:0,57,881	0/0:20,0:20:54.18:0,54,880	0/0:20,0:20:57.19:0,57,931	0/0:21,0:21:42.14:0,42,686	0/0:26,0:26:60.17:0,60,909	0/0:34,0:34:96.31:0,96,1543	0/0:30,0:30:87.29:0,87,1397	0/0:15,0:15:45.14:0,45,706	0/0:20,0:20:54.18:0,54,875	1/1:2,15:18:54.19:1179,54,0	1/1:5,31:36:96.33:2134,96,0	1/1:2,14:16:38.80:871,39,0	0/0:28,0:28:81.28:0,81,1323	0/0:23,0:23:66.23:0,66,1078	0/0:16,0:16:42.13:0,42,661	0/0:24,0:24:66.21:0,66,1055	1/1:1,26:27:29.21:1540,29,0	1/1:5,18:23:54.18:1205,54,0	1/1:0,22:22:57.20:1273,57,0
chr10	39337167	.	T	TC	795.97	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=-1.062;DP=652;FS=2.331;HRun=0;HaplotypeScore=78.9865;InbreedingCoeff=0.8184;MQ=66.76;MQ0=11;MQRankSum=1.394;QD=9.83;ReadPosRankSum=1.555;VQSLOD=3.4883;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,125,1389	0/0:12,0:12:36.10:0,36,460	0/0:45,0:14:18.56:0,19,257	0/1:35,0:15:5.49:5,0,207	0/0:17,0:17:44.91:0,45,491	0/0:18,0:18:45.60:0,46,584	0/0:20,0:20:52.34:0,52,573	0/0:34,0:33:86.43:0,86,879	0/0:17,0:17:51.11:0,51,607	0/0:25,0:24:69.09:0,69,831	0/0:17,0:17:46.33:0,46,515	0/0:16,0:16:43.99:0,44,406	1/1:5,17:22:32.76:375,33,0	1/1:5,19:24:45.80:541,46,0	0/0:27,0:26:66.58:0,67,766	0/0:25,0:22:51.53:0,52,636	0/0:25,0:24:72.18:0,72,893	0/0:28,0:28:64.57:0,65,738	0/0:29,0:28:80.94:0,81,829	0/0:26,0:25:60.89:0,61,657	0/0:13,0:13:30.01:0,30,331	0/0:18,0:18:48.08:0,48,520	0/0:21,0:19:45.10:0,45,531	0/0:17,0:17:51.05:0,51,631	0/0:18,0:17:42.54:0,43,463	0/0:16,0:16:47.50:0,47,508	0/0:29,0:29:87.08:0,87,979	0/0:13,0:13:31.13:0,31,285
chr10	39339568	.	AAT	A	2121.39	PASS	AC=12;AF=0.261;AN=46;BaseQRankSum=6.762;DP=217;FS=0.667;HRun=0;HaplotypeScore=35.9124;InbreedingCoeff=0.8149;MQ=74.31;MQ0=0;MQRankSum=-2.482;QD=29.06;ReadPosRankSum=-2.809;VQSLOD=3.1794;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:39.11:0,39,630	0/0:4,0:4:9.03:0,9,152	0/0:12,0:10:9.64:0,10,127	0/0:7,0:4:5.98:0,6,70	0/0:8,0:8:15.05:0,15,253	0/0:9,0:9:24.08:0,24,405	0/0:2,0:2:3.01:0,3,51	1/1:6,26:32:78.24:990,78,0	0/0:6,0:6:12.04:0,12,202	0/0:8,0:8:21.07:0,21,332	0/0:9,0:9:24.08:0,24,405	0/0:4,0:4:9.03:0,9,152	./.	./.	0/0:4,0:4:6.02:0,6,101	0/0:6,0:6:9.01:0,9,125	0/0:17,0:17:51.17:0,51,859	0/0:16,0:16:33.11:0,33,557	1/1:2,10:12:30.10:384,30,0	1/1:0,4:4:12.04:154,12,0	./.	0/0:5,0:5:3.01:0,3,51	./.	./.	0/0:8,0:8:21.07:0,21,353	1/1:2,4:6:12.01:138,12,0	1/1:0,6:6:15.05:193,15,0	1/1:2,11:13:36.06:430,36,0
chr10	39339615	.	A	AATAT	3525.66	PASS	AC=14;AF=0.292;AN=48;BaseQRankSum=-2.535;DP=172;FS=0.677;HRun=0;HaplotypeScore=36.5357;InbreedingCoeff=0.6001;MQ=84.61;MQ0=1;MQRankSum=-6.022;QD=55.09;ReadPosRankSum=-2.380;VQSLOD=3.6374;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:15.05:0,15,258	0/0:3,0:3:9.03:0,9,159	0/0:7,0:4:3.56:0,4,14	0/0:24,0:12:21.97:0,22,200	0/0:3,0:3:9.02:0,9,133	0/0:3,0:3:6.01:0,6,76	./.	1/1:25,13:38:96.25:1955,96,0	0/0:2,0:2:6.02:0,6,106	0/0:2,0:2:6.02:0,6,106	0/0:5,0:5:12.04:0,12,212	0/0:2,0:2:3.01:0,3,53	./.	./.	0/0:1,0:1:3.01:0,3,53	0/0:2,0:2:3.01:0,3,53	0/0:21,0:21:60.10:0,60,965	0/0:13,0:13:36.11:0,36,603	1/1:0,2:4:5.67:103,6,0	1/1:0,1:1:3.01:77,3,0	1/1:0,1:1:3.01:77,3,0	0/0:1,0:1:3.01:0,3,53	0/0:1,0:1:3.01:0,3,53	./.	0/0:7,0:7:21.07:0,21,371	1/1:1,1:2:3.01:77,3,0	1/1:1,2:3:9.03:201,9,0	1/1:1,14:15:42.14:1037,42,0
chr10	39339999	.	GAAAAAC	G	3209.97	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=8.234;DP=477;FS=9.138;HRun=0;HaplotypeScore=99.8140;InbreedingCoeff=0.9017;MQ=60.24;MQ0=10;MQRankSum=-5.274;QD=28.66;ReadPosRankSum=-3.019;VQSLOD=1.9975;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:54.18:0,54,1532	0/0:4,0:4:6.02:0,6,176	0/0:24,0:10:16.30:0,16,356	0/0:22,0:9:10.25:0,10,149	0/0:23,0:23:54.16:0,54,1513	0/0:18,0:18:48.16:0,48,1483	0/0:20,0:20:36.12:0,36,1078	1/1:10,16:24:44.15:834,44,0	0/0:12,0:12:21.07:0,21,625	0/0:19,0:19:45.15:0,45,1335	0/0:15,0:15:42.14:0,42,1195	0/0:15,0:15:30.10:0,30,958	0/0:5,0:5:9.03:0,9,264	0/0:14,0:14:30.10:0,30,976	0/0:19,0:19:48.16:0,48,1539	0/0:14,0:14:30.10:0,30,908	0/0:36,0:35:78.27:0,78,2369	0/0:28,0:28:66.22:0,66,2047	1/1:12,8:19:24.05:441,24,0	1/1:1,7:8:18.06:304,18,0	1/1:4,6:10:5.45:81,5,0	0/0:6,0:5:15.05:0,15,458	0/0:9,0:9:27.09:0,27,883	0/0:28,0:26:48.16:0,48,1418	0/0:11,0:11:15.05:0,15,483	1/1:6,17:23:9.78:817,10,0	1/1:3,17:20:39.13:794,39,0	1/1:2,2:4:6.02:125,6,0
chr10	39340104	.	GA	G	1875.87	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=8.933;DP=480;FS=0.975;HRun=8;HaplotypeScore=59.3359;InbreedingCoeff=0.9858;MQ=75.76;MQ0=0;MQRankSum=0.026;QD=23.45;ReadPosRankSum=1.839;VQSLOD=4.3098;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,20:24:43.26:508,43,0	0/0:10,0:10:30.09:0,30,362	0/0:14,0:14:32.86:0,33,361	0/0:9,0:9:11.06:0,11,111	0/0:26,0:26:72.22:0,72,870	0/0:21,0:21:63.17:0,63,738	0/0:17,0:17:48.15:0,48,580	0/0:39,0:39:99:0,102,1196	0/0:12,0:12:27.08:0,27,326	1/1:0,20:20:60.10:579,60,0	1/1:2,14:16:39.06:377,39,0	0/0:14,0:14:36.09:0,36,414	0/0:11,0:11:27.08:0,27,324	0/0:11,0:11:27.08:0,27,326	0/0:11,0:11:24.06:0,24,277	0/0:16,0:16:42.12:0,42,496	0/0:27,0:27:43.89:0,44,805	1/1:1,19:20:60.07:572,60,0	0/0:17,0:17:45.12:0,45,530	0/0:21,0:21:57.17:0,57,689	0/0:14,0:14:39.12:0,39,471	0/0:10,0:10:30.09:0,30,362	0/0:15,0:15:36.11:0,36,435	0/0:14,0:14:42.13:0,42,507	0/0:16,0:16:42.13:0,42,507	0/0:27,2:29:23.29:0,23,848	0/0:19,0:18:48.13:0,48,567	0/0:7,0:7:21.06:0,21,254
chr10	39340192	.	C	CA	2687.72	PASS	AB=0.982;AC=10;AF=0.179;AN=56;BaseQRankSum=-8.245;DP=517;FS=3.344;HRun=6;HaplotypeScore=48.7389;InbreedingCoeff=0.8251;MQ=64.94;MQ0=0;MQRankSum=0.696;QD=22.03;ReadPosRankSum=0.790;VQSLOD=2.7984;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,20:22:58.74:721,59,0	0/0:4,0:4:12.03:0,12,122	0/0:13,0:12:19.94:0,20,206	0/1:5,0:4:2.10:2,0,14	0/0:27,0:27:78.17:0,78,795	0/0:17,0:17:39.06:0,39,390	0/0:10,0:10:27.06:0,27,276	0/0:38,0:38:93.19:0,93,938	0/0:13,0:13:36.08:0,36,367	1/1:9,16:25:63.19:781,63,0	1/1:5,11:16:42.12:515,42,0	0/0:18,0:18:48.11:0,48,490	0/0:17,0:17:45.06:0,45,449	0/0:18,0:18:54.12:0,54,550	0/0:15,0:15:39.08:0,39,398	0/0:13,0:13:33.07:0,33,336	0/0:26,0:26:72.16:0,72,734	1/1:4,23:27:66.21:826,66,0	0/0:16,0:16:36.08:0,36,367	0/0:24,0:24:72.16:0,72,735	0/0:12,0:12:33.07:0,33,336	0/0:12,0:12:33.07:0,33,336	0/0:21,0:20:48.10:0,48,489	0/0:8,0:8:24.05:0,24,245	0/0:27,0:27:75.17:0,75,765	0/1:26,1:27:3.42:3,0,588	0/0:29,0:29:84.19:0,84,856	0/0:17,0:17:51.12:0,51,520
chr10	39340430	.	A	ACGTTTCT	4572.87	PASS	AB=0.742;AC=2;AF=0.036;AN=56;BaseQRankSum=-0.690;DP=895;FS=3.759;HRun=0;HaplotypeScore=486.6242;InbreedingCoeff=-0.0374;MQ=63.45;MQ0=0;MQRankSum=-9.736;QD=54.44;ReadPosRankSum=-1.764;VQSLOD=4.3003;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,126,2904	0/0:21,0:21:54.11:0,54,1266	0/0:21,0:20:32.98:0,33,546	0/0:19,0:19:42.06:0,42,764	0/0:38,0:38:69.94:0,70,1764	0/0:34,0:34:88.24:0,88,2009	0/0:31,0:31:79.05:0,79,1584	0/0:42,0:42:85.10:0,85,1855	0/0:29,0:29:66.84:0,67,1602	0/0:37,0:37:71.96:0,72,2183	0/0:25,0:25:57.56:0,58,1291	0/0:38,0:38:99:0,113,2466	0/1:33,16:49:99:2508,0,322	0/1:22,13:35:99:2065,0,394	0/0:46,0:46:78.24:0,78,2416	0/0:34,0:34:63.80:0,64,1596	0/0:45,0:45:99:0,105,2705	0/0:19,0:19:45.12:0,45,1042	0/0:22,0:22:52.02:0,52,1165	0/0:36,0:36:56.54:0,57,1831	0/0:44,0:44:93.26:0,93,2053	0/0:29,0:29:63.05:0,63,1523	0/0:29,0:29:76.08:0,76,1643	0/0:32,0:32:57.19:0,57,1322	0/0:31,0:31:84.27:0,84,1872	0/0:31,0:31:76.77:0,77,1758	0/0:24,0:24:32.57:0,33,1267	0/0:6,0:6:18.06:0,18,439
chr10	39340898	.	AGTC	A	628.56	PASS	AB=0.817;AC=5;AF=0.089;AN=56;BaseQRankSum=10.490;DP=1095;FS=48.713;HRun=0;HaplotypeScore=225.4604;InbreedingCoeff=-0.0986;MQ=70.69;MQ0=0;MQRankSum=-7.988;QD=3.70;ReadPosRankSum=1.232;VQSLOD=0.8204;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:57:99:0,166,3872	0/0:17,0:17:45.15:0,45,1064	0/0:18,0:20:23.84:0,24,993	0/0:19,0:19:45.10:0,45,920	0/1:25,3:28:28.30:28,0,1367	0/0:43,0:43:99:0,126,2867	0/0:35,0:35:99:0,105,2469	0/0:67,0:67:99:0,184,4152	0/1:20,9:29:99:201,0,924	0/0:40,0:40:99:0,111,2498	0/0:22,0:22:66.20:0,66,1448	0/0:53,0:53:99:0,160,3715	0/0:41,0:41:99:0,117,2748	0/0:45,0:45:99:0,135,3129	0/1:24,6:30:99:137,0,1540	0/1:30,13:43:99:275,0,2001	0/1:31,9:40:99:105,0,1743	0/0:55,0:54:99:0,160,3696	0/0:41,0:41:99:0,111,2530	0/0:38,0:38:99:0,111,2618	0/0:83,0:83:99:0,247,5733	0/0:14,1:15:16.47:0,16,670	0/0:34,0:34:87.30:0,87,1941	0/0:49,0:49:99:0,144,3376	0/0:27,0:27:78.24:0,78,1749	0/0:44,0:44:99:0,132,3118	0/0:52,0:52:99:0,141,3245	0/0:28,0:28:84.29:0,84,1958
chr10	39340903	.	AGT	A	455.90	PASS	AB=0.804;AC=5;AF=0.089;AN=56;BaseQRankSum=9.561;DP=1075;FS=67.158;HRun=0;HaplotypeScore=203.0608;InbreedingCoeff=-0.0993;MQ=75.56;MQ0=0;MQRankSum=-7.891;QD=2.87;ReadPosRankSum=0.837;VQSLOD=0.4530;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:57:99:0,165,2617	0/0:17,0:17:48.16:0,48,956	0/0:27,0:27:37.95:0,38,1032	0/0:24,0:24:66.04:0,66,986	0/1:19,3:22:18.68:19,0,1091	0/0:41,0:41:99:0,99,2139	0/0:40,0:40:94.28:0,94,1587	0/0:61,0:61:99:0,181,3534	0/1:14,9:23:99:164,0,779	0/0:34,0:34:99:0,102,1327	0/0:22,0:22:63.16:0,63,928	0/0:55,0:55:99:0,162,2430	0/0:41,0:41:99:0,114,1864	0/0:49,0:49:99:0,120,2317	0/1:25,6:31:99:111,0,1355	0/1:30,13:43:99:224,0,1687	0/1:31,9:40:55.24:55,0,1517	0/0:54,0:54:99:0,159,2556	0/0:37,0:37:99:0,99,1969	0/0:38,0:38:99:0,114,2224	0/0:86,0:86:99:0,256,5070	0/0:8,1:9:11.28:0,11,405	0/0:30,0:30:71.72:0,72,1235	0/0:50,0:50:99:0,127,2431	0/0:24,0:24:72.23:0,72,1401	0/0:46,0:46:99:0,138,2720	0/0:46,0:46:99:0,138,2706	0/0:28,0:28:84.29:0,84,1702
chr10	39341652	.	TTTTG	T	1430.32	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.490;DP=639;FS=4.734;HRun=0;HaplotypeScore=101.8996;InbreedingCoeff=0.9995;MQ=74.56;MQ0=0;MQRankSum=-4.318;QD=42.07;ReadPosRankSum=1.110;VQSLOD=4.0818;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:63.21:0,63,1602	0/0:17,0:17:51.18:0,51,1304	0/0:19,0:19:51.17:0,51,1162	0/0:15,0:15:42.03:0,42,838	0/0:25,0:25:69.23:0,69,1765	0/0:34,0:34:96.31:0,96,2410	0/0:18,0:18:45.13:0,45,1090	0/0:34,0:34:99:0,102,2508	0/0:17,0:17:51.14:0,51,1202	0/0:31,0:31:87.29:0,87,2231	0/0:29,0:29:81.24:0,81,1863	0/0:19,0:19:57.20:0,57,1414	1/1:2,12:14:33.01:585,33,0	1/1:1,19:20:51.17:967,51,0	0/0:18,0:18:54.18:0,54,1323	0/0:25,0:25:72.24:0,72,1823	0/0:26,0:26:78.27:0,78,1976	0/0:26,0:26:72.24:0,72,1822	0/0:20,0:20:57.19:0,57,1379	0/0:39,0:39:99:0,114,2799	0/0:19,0:19:57.20:0,57,1445	0/0:21,0:21:57.18:0,57,1409	0/0:27,0:27:78.27:0,78,1941	0/0:10,0:10:30.09:0,30,717	0/0:19,0:19:57.14:0,57,1232	0/0:31,0:31:90.30:0,90,2234	0/0:23,0:23:69.24:0,69,1729	0/0:18,0:18:42.13:0,42,938
chr10	39342441	.	G	GCACACACACACACACA	15424.82	PASS	AB=1.000;AC=49;AF=0.907;AN=54;BaseQRankSum=0.112;DP=536;FS=1.112;HRun=0;HaplotypeScore=248.3680;InbreedingCoeff=0.4228;MQ=53.46;MQ0=8;MQRankSum=-3.276;QD=32.07;ReadPosRankSum=0.316;VQSLOD=4.0248;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:30:5.65:47,6,0	1/1:7,0:7:6.02:425,6,0	1/1:17,0:8:1.25:3,1,0	0/0:20,0:8:0.47:0,0,1	1/1:31,2:33:2.02:226,2,0	1/1:28,0:27:4.76:386,5,0	1/1:20,4:25:6.02:334,6,0	1/1:20,0:17:20.48:535,20,0	1/1:15,3:19:12.04:875,12,0	1/1:14,0:14:30.10:1371,30,0	./.	1/1:13,3:15:15.05:1139,15,0	1/1:18,0:18:15.03:821,15,0	1/1:11,0:11:5.98:114,6,0	1/1:23,3:28:10.77:690,11,0	1/1:21,5:27:15.05:965,15,0	1/1:14,5:22:21.07:1417,21,0	1/1:18,0:18:24.08:1107,24,0	1/1:12,0:11:6.02:310,6,0	1/1:19,0:19:16.59:679,17,0	0/1:17,0:14:0:0,0,1	1/1:11,0:12:2.70:168,3,0	1/1:18,1:20:2.90:20,3,0	1/1:18,1:20:13.58:801,14,0	0/0:21,0:22:42.13:0,42,1429	1/1:16,0:15:18.06:1080,18,0	1/1:22,0:24:27.09:1658,27,0	1/1:7,0:7:9:255,9,0
chr10	39343115	.	A	AC	131.45	PASS	AC=10;AF=0.227;AN=44;BaseQRankSum=3.560;DP=452;FS=15.102;HRun=0;HaplotypeScore=49.1737;InbreedingCoeff=0.8386;MQ=67.48;MQ0=11;MQRankSum=-2.174;QD=10.11;ReadPosRankSum=-4.313;VQSLOD=1.2983;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	0/0:10,0:9:27.09:0,27,377	0/0:18,0:9:27.09:0,27,368	0/0:21,0:16:48.16:0,48,658	0/0:31,0:31:93.24:0,93,1257	0/0:17,0:16:48.14:0,48,651	0/0:28,0:27:78.26:0,78,1083	1/1:1,2:2:6.02:91,6,0	0/0:27,0:26:78.24:0,78,1072	./.	./.	0/0:37,0:37:99:0,102,1424	0/0:25,0:25:69.23:0,69,962	0/0:25,0:25:75.22:0,75,1026	0/0:34,0:34:96.32:0,96,1340	0/0:23,0:23:66.22:0,66,922	0/0:33,0:33:93.31:0,93,1300	./.	1/1:3,0:2:5.95:50,6,0	./.	1/1:0,4:4:5.97:46,6,0	0/0:23,0:23:66.22:0,66,922	0/0:23,1:23:69.23:0,69,964	0/0:33,0:33:93.29:0,93,1281	0/0:25,0:25:72.24:0,72,1006	1/1:1,0:1:3:25,3,0	1/1:1,1:2:6:53,6,0	./.
chr10	39350646	.	TC	T	9744.93	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=16.265;DP=645;FS=31.399;HRun=1;HaplotypeScore=75.9127;InbreedingCoeff=0.9994;MQ=73.76;MQ0=1;MQRankSum=-4.956;QD=37.48;ReadPosRankSum=0.238;VQSLOD=2.6130;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,27:27:78.21:1065,78,0	0/0:17,0:17:51.09:0,51,716	0/0:32,0:29:81.09:0,81,1124	0/0:25,0:24:65.22:0,65,902	0/0:32,0:32:96.31:0,96,1413	0/0:22,0:22:63.21:0,63,941	0/0:15,0:15:45.14:0,45,653	1/1:1,23:23:63.12:800,63,0	0/0:15,0:15:45.14:0,45,654	1/1:0,20:20:57.17:763,57,0	1/1:0,20:20:56.98:703,57,0	0/0:23,0:23:66.14:0,66,884	0/0:15,0:15:45.08:0,45,646	0/0:21,0:21:63.20:0,63,922	0/0:30,0:30:90.28:0,90,1306	0/0:26,0:26:78.25:0,78,1145	0/0:35,0:35:99:0,105,1505	1/1:0,23:23:63.15:838,63,0	1/1:0,20:20:57.17:778,57,0	1/1:0,21:21:60.12:795,60,0	1/1:0,28:28:69.23:964,69,0	0/0:21,0:21:63.16:0,63,863	0/0:18,0:18:54.18:0,54,807	0/0:15,0:15:45.15:0,45,674	0/0:23,0:23:69.19:0,69,971	1/1:0,37:37:99:1511,111,0	1/1:0,33:33:90.27:1236,90,0	1/1:0,7:7:21.07:293,21,0
chr10	39350767	.	CGA	C	1721.73	PASS	AC=20;AF=0.370;AN=54;BaseQRankSum=11.078;DP=406;FS=20.672;HRun=0;HaplotypeScore=80.5435;InbreedingCoeff=0.8879;MQ=79.84;MQ0=0;MQRankSum=-11.130;QD=29.18;ReadPosRankSum=-1.282;VQSLOD=2.9783;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,3:3:5.47:78,5,0	0/0:10,0:10:27.09:0,27,513	0/0:29,0:29:81.21:0,81,1384	0/0:15,0:15:42.12:0,42,679	0/0:26,0:26:72.22:0,72,1304	0/0:26,0:26:75.26:0,75,1420	0/0:20,0:20:54.19:0,54,1043	1/1:0,7:7:21.07:290,21,0	0/0:13,0:13:39.12:0,39,701	1/1:0,2:2:3.01:45,3,0	./.	0/0:24,0:24:66.21:0,66,1220	0/0:18,0:18:48.16:0,48,907	0/0:13,0:13:39.13:0,39,753	0/0:31,0:31:87.30:0,87,1679	0/0:16,0:16:45.14:0,45,826	0/0:31,0:31:90.27:0,90,1668	1/1:0,1:1:2.60:10,3,0	1/1:0,10:10:27.09:382,27,0	1/1:1,9:10:11.96:155,12,0	1/1:0,2:2:6.01:65,6,0	0/0:11,0:11:33.11:0,33,627	0/0:17,0:17:51.17:0,51,965	0/0:29,0:29:84.29:0,84,1609	0/0:18,0:18:54.19:0,54,1033	1/1:0,12:13:33.11:462,33,0	1/1:1,8:9:27.04:356,27,0	1/1:0,2:2:6.02:74,6,0
chr10	39351025	.	T	TTGA	12494.55	PASS	AC=20;AF=0.370;AN=54;BaseQRankSum=10.174;DP=561;FS=11.820;HRun=0;HaplotypeScore=111.3667;InbreedingCoeff=0.9989;MQ=91.15;MQ0=0;MQRankSum=-14.900;QD=56.03;ReadPosRankSum=-3.075;VQSLOD=5.0964;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,28:32:78.27:1784,78,0	0/0:12,0:12:27.09:0,27,460	0/0:30,0:30:74.71:0,75,1261	0/0:22,0:22:51.79:0,52,816	0/0:18,0:18:51.17:0,51,870	0/0:23,0:23:69.24:0,69,1162	0/0:18,0:18:54.18:0,54,916	1/1:16,19:36:96.32:2047,96,0	0/0:20,0:20:51.17:0,51,870	1/1:2,11:13:36.12:817,36,0	1/1:2,6:8:21.07:464,21,0	0/0:12,0:12:36.12:0,36,607	0/0:21,0:21:63.22:0,63,1073	0/0:17,0:17:48.15:0,48,792	0/0:26,0:26:69.24:0,69,1177	0/0:20,0:20:60.21:0,60,1018	0/0:30,0:30:84.29:0,84,1433	1/1:5,14:19:43.42:1079,43,0	1/1:7,16:23:57.20:1302,57,0	1/1:6,8:14:30.10:656,30,0	1/1:6,23:29:60.19:1309,60,0	0/0:12,0:12:36.12:0,36,606	0/0:15,0:15:45.15:0,45,762	0/0:25,0:25:75.24:0,75,1252	0/0:17,0:17:45.15:0,45,743	1/1:2,7:9:27.09:600,27,0	1/1:7,32:38:99:2437,108,0	./.
chr10	39351069	.	CT	C	7192.29	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=17.810;DP=570;FS=1.405;HRun=1;HaplotypeScore=97.8786;InbreedingCoeff=0.9840;MQ=80.40;MQ0=0;MQRankSum=-6.977;QD=29.84;ReadPosRankSum=-0.195;VQSLOD=4.5144;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,29:30:77.12:920,77,0	0/0:14,0:14:42.14:0,42,663	0/0:18,0:18:51.14:0,51,729	0/0:14,0:14:21.43:0,21,447	0/0:30,0:30:90.31:0,90,1439	0/0:22,0:22:66.22:0,66,1044	0/0:25,0:25:75.24:0,75,1170	1/1:5,26:31:79.44:874,79,0	0/0:17,0:17:51.14:0,51,763	1/1:3,20:23:55.02:616,55,0	1/1:0,11:11:22.94:272,23,0	0/0:16,0:16:48.14:0,48,722	0/0:19,0:19:57.19:0,57,909	0/0:20,0:20:60.20:0,60,955	0/0:30,0:30:90.29:0,90,1414	0/0:20,0:20:60.18:0,60,913	0/0:26,0:26:75.26:0,75,1187	1/1:1,13:14:38.60:464,39,0	1/1:2,19:21:56.73:672,57,0	1/1:0,13:13:36.10:418,36,0	1/1:2,27:30:80.32:920,80,0	0/0:13,0:13:39.13:0,39,611	0/0:12,0:12:36.11:0,36,549	0/0:18,0:18:54.18:0,54,863	0/0:15,0:15:45.15:0,45,711	1/1:2,21:23:61.54:730,62,0	1/1:1,41:43:99:1240,110,0	1/1:0,2:2:6.02:66,6,0
chr10	39352034	.	GAGGAAGGA	G	6116.32	PASS	AB=0.944;AC=33;AF=0.611;AN=54;BaseQRankSum=-5.320;DP=694;FS=9.650;HRun=0;HaplotypeScore=209.7985;InbreedingCoeff=0.0826;MQ=62.10;MQ0=4;MQRankSum=-3.828;QD=10.49;ReadPosRankSum=1.741;VQSLOD=3.0151;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:24:30.14:30,0,30	1/1:7,4:12:15.04:306,15,0	./.	0/0:15,0:13:0.30:0,0,1	1/1:11,20:31:47.62:732,48,0	1/1:16,21:36:24.08:598,24,0	0/1:33,0:32:10.83:329,0,11	0/1:23,0:23:0:0,0,0	0/1:12,15:27:0.75:357,0,1	0/1:28,0:28:12.03:12,0,50	0/1:21,0:21:21.56:22,0,75	0/1:11,16:27:10.28:499,0,10	0/0:25,0:26:60.16:0,60,1815	0/0:21,0:21:30.09:0,30,936	1/1:11,18:29:27.09:664,27,0	1/1:12,15:27:3.10:428,3,0	1/1:10,17:27:14.41:306,14,0	0/1:14,0:14:19.77:20,0,66	0/1:14,0:14:3.04:3,0,302	0/1:25,0:25:63.93:64,0,367	0/0:29,0:29:15.74:0,16,427	1/1:10,18:28:47.26:768,47,0	1/1:11,17:28:17.59:391,18,0	1/1:19,17:35:8.40:224,8,0	1/1:9,0:21:17.98:287,18,0	0/1:25,0:25:2.56:3,0,443	0/1:35,0:35:13.43:13,0,897	0/1:10,0:10:8.52:63,0,9
chr10	39352063	.	AG	A	585.56	PASS	AB=0.906;AC=10;AF=0.179;AN=56;BaseQRankSum=5.731;DP=645;FS=5.438;HRun=2;HaplotypeScore=163.4526;InbreedingCoeff=-0.1794;MQ=52.67;MQ0=8;MQRankSum=-3.833;QD=2.65;ReadPosRankSum=2.634;VQSLOD=0.0983;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:19,4:22:54.29:54,0,167	0/1:9,0:9:11.93:12,0,113	0/0:15,0:5:12.04:0,12,169	0/0:16,0:8:18.94:0,19,241	0/0:28,0:28:50.12:0,50,688	0/0:37,0:36:44.69:0,45,625	0/0:24,0:23:68.70:0,69,923	0/1:31,0:28:14.90:15,0,394	0/0:24,0:24:26.47:0,26,355	0/1:19,12:31:71.54:294,0,72	0/1:9,12:21:6.52:203,0,7	0/0:28,0:27:29.92:0,30,399	0/0:27,0:27:79.14:0,79,1136	0/0:17,0:17:51.15:0,51,725	0/0:26,0:26:26.46:0,26,345	0/0:22,0:22:21.46:0,21,299	0/0:28,0:28:27.08:0,27,296	0/1:14,3:17:52.12:52,0,146	0/0:22,0:21:13.62:0,14,169	0/0:22,0:22:30.83:0,31,186	0/1:24,0:24:35.66:36,0,144	0/0:23,0:23:40.97:0,41,533	0/0:26,0:26:45.68:0,46,570	0/0:32,0:31:21.19:0,21,296	0/1:17,0:17:8.07:8,0,151	0/1:18,0:18:38.73:39,0,60	0/1:30,0:30:14.73:15,0,192	0/0:7,0:7:7.39:0,7,37
chr10	39352066	.	AAGG	A	1093.84	PASS	AB=0.947;AC=18;AF=0.321;AN=56;BaseQRankSum=9.581;DP=644;FS=3.882;HRun=0;HaplotypeScore=179.7979;InbreedingCoeff=-0.4403;MQ=51.74;MQ0=9;MQRankSum=-11.360;QD=2.57;ReadPosRankSum=9.836;VQSLOD=1.4202;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:20,4:23:73.96:74,0,164	0/1:9,0:9:32.22:32,0,97	0/0:16,0:6:18.06:0,18,222	0/0:14,0:6:18.02:0,18,206	0/1:29,0:29:22.07:22,0,577	0/1:39,0:38:35.67:36,0,509	0/0:25,0:24:68:0,68,753	0/0:28,0:25:37.09:0,37,430	0/1:23,0:23:32.45:32,0,234	0/1:19,12:31:34.61:428,0,35	0/1:8,12:20:8.48:249,0,8	0/1:28,0:27:40.30:40,0,371	0/0:26,0:26:68.33:0,68,1565	0/0:18,0:18:51.17:0,51,968	0/1:26,0:26:65.65:66,0,214	0/1:22,0:22:43.19:43,0,161	0/1:28,0:28:12.17:12,0,301	0/1:14,3:17:80.77:81,0,164	0/1:25,0:24:24.22:24,0,160	0/0:22,0:22:59.18:0,59,403	0/0:21,0:21:17.35:0,17,308	0/1:23,0:23:33.29:33,0,456	0/1:26,0:26:5.33:5,0,479	0/1:30,0:29:8.18:8,0,246	0/1:18,0:18:55.84:56,0,154	0/0:18,0:18:29.07:0,29,215	0/0:31,0:31:50.99:0,51,492	0/1:7,0:7:10.68:11,0,62
chr10	39352444	.	TA	T	2360.99	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=9.767;DP=535;FS=0.841;HRun=13;HaplotypeScore=88.8463;InbreedingCoeff=0.8977;MQ=72.47;MQ0=1;MQRankSum=0.732;QD=15.74;ReadPosRankSum=-1.216;VQSLOD=3.8773;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:30:48.18:0,48,244	0/0:9,0:9:21.02:0,21,199	0/0:23,0:12:9.37:0,9,60	0/0:16,1:15:2.94:0,3,19	0/0:30,3:33:37.29:0,37,672	0/0:15,1:16:13.97:0,14,262	0/0:12,1:13:2.12:0,2,177	1/1:8,33:41:89.15:703,89,0	0/0:15,0:15:36.02:0,36,334	0/0:18,0:18:31.25:0,31,154	0/0:18,0:18:34.82:0,35,178	0/0:18,0:18:32.99:0,33,310	0/0:7,0:7:12.02:0,12,117	0/0:24,0:24:45.06:0,45,434	0/0:19,0:19:32.97:0,33,299	0/0:14,0:14:27:0,27,251	0/0:35,0:34:74.15:0,74,713	0/0:11,0:11:22.99:0,23,131	1/1:6,10:19:35.90:236,36,0	1/1:4,13:17:38.77:284,39,0	1/1:3,9:12:26.83:195,27,0	0/0:7,0:7:15.02:0,15,146	0/0:24,0:24:57.03:0,57,525	0/0:13,0:13:36.06:0,36,350	0/0:18,1:20:7.10:0,7,365	1/1:1,23:25:67.59:482,68,0	1/1:3,19:22:56.66:415,57,0	1/1:2,12:14:32.81:240,33,0
chr10	39352457	.	A	AAT	4380.91	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=9.606;DP=514;FS=6.911;HRun=0;HaplotypeScore=94.4883;InbreedingCoeff=0.9920;MQ=65.18;MQ0=1;MQRankSum=-0.624;QD=19.30;ReadPosRankSum=0.387;VQSLOD=4.7512;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,20:26:45.02:716,45,0	0/0:10,0:10:24.01:0,24,278	0/0:19,0:8:20.83:0,21,211	0/0:11,0:9:13.63:0,14,153	0/0:36,0:36:99:0,99,1102	0/0:17,0:18:44.90:0,45,458	0/0:10,0:10:27.02:0,27,308	1/1:42,0:42:99:647,115,0	0/0:14,0:14:39.03:0,39,435	1/1:0,14:16:48.04:651,48,0	1/1:1,12:15:39.30:544,39,0	0/0:14,0:14:37.27:0,37,432	0/0:6,0:6:18.02:0,18,192	0/0:19,0:19:57.13:0,57,674	0/0:16,0:16:42.90:0,43,462	0/0:10,0:10:30.08:0,30,360	0/0:35,0:34:68.73:0,69,1006	1/1:0,8:10:18.06:309,18,0	1/1:24,0:24:59.49:407,59,0	1/1:14,0:14:37.91:165,38,0	1/1:11,0:11:18.39:70,18,0	0/0:8,0:8:24.02:0,24,265	0/0:26,0:26:65.99:0,66,725	0/0:13,0:13:35.88:0,36,456	0/0:22,0:22:59.85:0,60,642	1/1:32,0:32:89.09:479,89,0	1/1:22,0:22:55.73:258,56,0	1/1:15,0:15:32.90:134,33,0
chr10	39352503	.	CTGTGTGTGTGTGTGTGTGTGTGTGTG	C	3888.48	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=5.838;DP=555;FS=0.000;HRun=0;HaplotypeScore=302.3541;InbreedingCoeff=0.7860;MQ=68.04;MQ0=24;MQRankSum=-5.452;QD=40.93;ReadPosRankSum=0.052;VQSLOD=1.7064;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:25:5.40:0,5,724	0/0:6,0:6:9.03:0,9,958	0/0:32,0:19:6.02:0,6,165	0/0:37,0:25:21.07:0,21,666	0/0:21,0:21:27.03:0,27,1805	0/0:19,0:18:34:0,34,3192	0/0:20,0:19:31.56:0,32,2773	0/0:30,0:28:0:0,0,0	0/0:12,0:12:15.05:0,15,1366	0/0:23,0:22:53.39:0,53,4687	0/0:12,0:12:21.07:0,21,2107	0/0:17,0:15:9.50:0,10,524	0/0:8,0:16:27.09:0,27,2403	0/0:12,0:19:26.18:0,26,1672	0/0:18,0:22:20.93:0,21,1482	0/0:12,0:16:12.51:0,13,1199	0/0:28,0:27:25.89:0,26,1673	0/0:17,0:17:30.10:0,30,2249	1/1:16,1:15:3:203,3,0	1/1:10,4:14:12.04:606,12,0	1/1:9,1:10:3.90:153,4,0	0/0:11,0:15:9.81:0,10,565	0/0:15,0:19:20.10:0,20,1038	0/0:22,0:22:7.92:0,8,801	0/0:14,0:24:18.06:0,18,2007	1/1:20,4:23:18.04:948,18,0	1/1:14,8:22:24.08:1438,24,0	1/1:5,3:8:9.03:542,9,0
chr10	39352508	.	T	TGT	1010.72	PASS	AB=1.000;AC=35;AF=0.700;AN=50;BaseQRankSum=-4.676;DP=542;FS=9.397;HRun=0;HaplotypeScore=127.7312;InbreedingCoeff=0.3923;MQ=57.80;MQ0=28;MQRankSum=2.117;QD=2.76;ReadPosRankSum=-1.372;VQSLOD=1.8588;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:27:1.76:41,2,0	1/1:6,0:6:3:26,3,0	./.	./.	1/1:21,0:20:9.02:110,9,0	0/1:19,0:18:15.72:16,0,30	1/1:20,0:19:6.02:79,6,0	./.	1/1:15,0:14:9.45:76,9,0	1/1:23,0:22:9.75:79,10,0	1/1:14,0:14:15:138,15,0	0/1:15,0:13:0:0,0,0	1/1:15,0:15:18.48:166,18,0	1/1:19,0:19:11.03:84,11,0	1/1:22,0:22:3:26,3,0	1/1:17,0:16:5.99:52,6,0	1/1:28,0:27:0.47:1,0,0	1/1:20,0:19:11.95:104,12,0	0/0:17,0:13:2.84:0,3,14	0/0:11,0:11:2.84:0,3,14	0/0:10,0:10:0.47:0,0,1	1/1:16,0:16:3:26,3,0	1/1:17,0:16:2.99:26,3,0	1/1:15,7:23:6:65,6,0	0/1:25,0:25:25.87:38,0,26	0/0:23,0:22:11.36:0,11,56	0/0:21,0:21:14.20:0,14,69	0/0:7,0:7:5.64:0,6,27
chr10	39352530	.	T	TGT	1036.32	PASS	AB=1.000;AC=35;AF=0.700;AN=50;BaseQRankSum=-4.497;DP=509;FS=9.624;HRun=0;HaplotypeScore=134.6176;InbreedingCoeff=0.3967;MQ=45.39;MQ0=25;MQRankSum=2.430;QD=2.79;ReadPosRankSum=-2.383;VQSLOD=1.4477;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:26:1.77:41,2,0	1/1:7,0:7:3:26,3,0	./.	./.	1/1:20,0:19:9.02:110,9,0	0/1:18,0:17:15.72:16,0,30	1/1:26,0:25:6.02:80,6,0	0/0:12,0:9:0:0,0,0	1/1:14,0:13:8.98:75,9,0	1/1:19,0:18:9.75:79,10,0	1/1:15,0:14:15:138,15,0	0/1:16,0:14:0:0,0,0	1/1:17,0:17:18.48:166,18,0	1/1:18,0:18:11.03:84,11,0	1/1:23,0:23:3:26,3,0	1/1:19,0:18:5.99:52,6,0	1/1:23,5:27:0.25:0,0,0	1/1:19,0:18:11.95:104,12,0	0/0:12,0:9:2.84:0,3,14	0/0:12,0:12:2.84:0,3,14	./.	1/1:19,0:19:3:26,3,0	1/1:16,0:15:2.99:26,3,0	1/1:27,0:27:9:91,9,0	0/1:22,0:22:25.87:38,0,26	0/0:13,0:12:11.36:0,11,56	0/0:21,0:21:14.20:0,14,69	0/0:5,0:5:5.64:0,6,27
chr10	39355339	.	A	AT	1767.20	PASS	AB=0.974;AC=10;AF=0.179;AN=56;BaseQRankSum=-7.439;DP=677;FS=0.444;HRun=11;HaplotypeScore=71.1456;InbreedingCoeff=0.7276;MQ=76.40;MQ0=1;MQRankSum=0.346;QD=13.49;ReadPosRankSum=-0.154;VQSLOD=3.6941;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,35:39:87.17:883,87,0	0/0:12,0:12:29.87:0,30,229	0/0:19,0:18:26.23:0,26,199	0/1:18,0:17:15.22:15,0,103	0/0:22,1:23:28.36:0,28,393	0/0:28,0:28:77.68:0,78,600	0/0:16,0:18:39.90:0,40,286	0/0:28,0:28:44.78:0,45,348	0/0:33,1:35:61.18:0,61,643	1/1:4,15:21:44.69:407,45,0	1/1:4,14:18:32.99:313,33,0	0/0:15,1:16:5.38:0,5,222	0/0:26,3:30:27.99:0,28,379	0/0:29,0:30:55.34:0,55,597	0/0:31,0:32:76.69:0,77,583	0/0:25,0:26:67.74:0,68,510	0/0:31,0:31:86.61:0,87,666	1/1:4,13:17:30.06:305,30,0	0/1:17,1:18:11.82:12,0,236	0/0:15,0:15:29.87:0,30,232	0/0:40,0:41:99:0,107,813	0/0:20,0:21:50.29:0,50,378	0/0:24,0:24:50.73:0,51,395	0/0:29,0:29:77.68:0,78,601	0/0:22,1:22:26.73:0,27,388	0/0:23,3:26:7.81:0,8,426	0/0:23,0:21:56.76:0,57,439	0/0:15,0:16:37.90:0,38,284
chr10	39355986	.	G	GACACAC	4211.90	PASS	AB=0.806;AC=23;AF=0.460;AN=50;BaseQRankSum=-6.713;DP=751;FS=0.639;HRun=0;HaplotypeScore=207.1587;InbreedingCoeff=0.5183;MQ=52.10;MQ0=24;MQRankSum=-3.074;QD=10.40;ReadPosRankSum=-2.080;VQSLOD=3.8305;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:41:2.62:0,3,42	1/1:8,0:6:2.68:11,3,0	./.	./.	1/1:15,12:31:3:83,3,0	0/1:11,0:23:98.33:215,0,98	0/1:10,0:19:32.25:32,0,54	0/0:15,0:22:8.67:0,9,97	1/1:11,13:31:27.09:692,27,0	0/0:7,0:22:24.08:0,24,333	./.	1/1:10,13:25:30.06:687,30,0	0/0:16,0:39:54.04:0,54,703	0/0:12,0:31:38.21:0,38,516	1/1:21,12:45:26.22:574,26,0	1/1:10,16:30:42.14:1343,42,0	1/1:19,5:29:9.28:404,9,0	0/1:9,0:14:35.85:38,0,36	0/0:4,0:12:12.43:0,12,164	0/0:9,0:17:5.06:0,5,73	0/1:38,0:56:0.18:0,0,1	0/1:16,9:26:0:0,0,0	1/1:12,5:20:6.02:117,6,0	1/1:24,9:39:2.60:13,3,0	0/0:15,0:26:15.23:0,15,175	0/0:18,0:28:25.50:0,25,320	0/0:3,0:17:14.70:0,15,196	0/0:6,0:10:9.50:0,10,126
chr10	39356986	.	AT	A	6555.78	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=10.923;DP=718;FS=14.401;HRun=3;HaplotypeScore=88.0655;InbreedingCoeff=0.9893;MQ=88.68;MQ0=0;MQRankSum=-5.987;QD=34.32;ReadPosRankSum=-1.789;VQSLOD=3.0542;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,147,2113	0/0:10,0:10:30.06:0,30,409	0/0:37,0:37:99:0,108,1470	0/0:19,0:18:48.13:0,48,662	0/0:25,0:25:75.25:0,75,1070	0/0:24,0:24:69.21:0,69,960	0/0:25,0:25:72.21:0,72,996	1/1:0,34:34:99:1215,102,0	0/0:23,0:23:66.22:0,66,951	0/0:25,0:25:75.25:0,75,1081	0/0:21,0:21:57.19:0,57,820	0/0:29,0:29:84.28:0,84,1208	0/0:15,0:15:45.15:0,45,647	0/0:23,0:23:69.23:0,69,994	0/0:33,0:33:96.32:0,96,1380	0/0:22,0:22:66.21:0,66,934	0/0:29,0:29:84.27:0,84,1191	0/0:17,0:17:51.17:0,51,734	1/1:1,28:29:84.26:1040,84,0	1/1:0,27:27:75.24:930,75,0	1/1:2,36:38:96.30:1190,96,0	0/0:25,0:25:75.24:0,75,1059	0/0:33,0:33:99:0,99,1389	0/0:21,0:21:57.18:0,57,803	0/0:22,0:22:63.21:0,63,907	1/1:1,31:32:93.28:1140,93,0	1/1:1,27:28:75.24:930,75,0	1/1:0,3:3:9.03:112,9,0
chr10	39358657	.	GT	G	1987.59	PASS	AB=0.701;AC=44;AF=0.786;AN=56;BaseQRankSum=1.816;DP=523;FS=5.543;HRun=16;HaplotypeScore=78.2567;InbreedingCoeff=0.1079;MQ=74.83;MQ0=7;MQRankSum=-0.308;QD=4.24;ReadPosRankSum=4.275;VQSLOD=1.2893;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:15,13:30:9.65:138,0,10	1/1:3,6:10:3.32:76,3,0	0/0:29,0:19:13.91:0,14,118	0/0:24,0:16:5.99:0,6,41	1/1:7,5:12:13.61:77,14,0	1/1:4,7:14:7.45:136,7,0	0/1:7,7:16:43.72:44,0,54	1/1:16,0:32:30.64:87,31,0	1/1:6,6:13:2.90:108,3,0	0/1:7,5:13:5.58:74,0,6	1/1:7,11:18:22.24:141,22,0	1/1:12,3:16:8.93:54,9,0	1/1:8,4:12:11.49:72,11,0	0/1:9,3:13:2.78:61,0,3	0/1:6,9:15:58.61:108,0,59	1/1:6,6:12:11.60:72,12,0	1/1:13,13:30:0.97:179,1,0	1/1:13,5:21:23.47:125,23,0	1/1:12,0:19:11.41:33,11,0	1/1:13,0:26:17.03:48,17,0	1/1:2,0:15:12.17:35,12,0	1/1:6,1:28:32.13:104,32,0	0/1:9,7:18:16.47:109,0,16	0/1:7,8:16:44.58:85,0,45	0/1:11,1:12:2.28:2,0,68	1/1:12,0:30:31.99:92,32,0	1/1:3,0:17:22.35:64,22,0	1/1:3,0:7:6.08:17,6,0
chr10	39360593	.	GT	G	4449.67	PASS	AB=0.541;AC=13;AF=0.232;AN=56;BaseQRankSum=12.364;DP=554;FS=2.089;HRun=6;HaplotypeScore=53.8999;InbreedingCoeff=0.8986;MQ=73.32;MQ0=0;MQRankSum=-2.851;QD=26.81;ReadPosRankSum=-1.099;VQSLOD=4.8073;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:60.19:0,60,784	0/0:7,0:7:21.07:0,21,276	0/0:23,1:18:24.61:0,25,408	0/0:15,0:15:39.09:0,39,482	0/0:19,0:19:51.13:0,51,629	0/0:17,0:17:45.13:0,45,565	0/0:22,0:22:66.12:0,66,816	1/1:4,35:39:99:1072,102,0	0/0:19,0:19:54.17:0,54,697	0/0:25,0:25:63.20:0,63,829	0/0:15,0:15:42.12:0,42,538	0/0:14,0:14:42.12:0,42,538	0/0:23,0:23:66.19:0,66,841	0/0:20,0:20:60.19:0,60,777	0/0:24,0:24:69.20:0,69,880	0/0:16,0:16:48.15:0,48,618	0/0:24,0:24:66.19:0,66,850	0/0:21,0:21:51.08:0,51,632	1/1:2,18:20:54.14:580,54,0	1/1:0,16:16:45.05:469,45,0	1/1:4,15:19:39.10:419,39,0	0/0:14,0:14:42.12:0,42,533	0/0:13,0:13:27.07:0,27,329	0/0:10,0:10:24.03:0,24,282	0/0:22,0:22:63.20:0,63,824	0/1:3,17:20:21.81:491,0,22	1/1:2,37:39:99:1128,105,0	1/1:1,12:13:27.07:291,27,0
chr10	39361136	.	GTATA	G	670.64	PASS	AB=0.836;AC=20;AF=0.500;AN=40;BaseQRankSum=-2.875;DP=197;FS=4.134;HRun=0;HaplotypeScore=44.4745;InbreedingCoeff=0.2795;MQ=64.54;MQ0=4;MQRankSum=1.713;QD=5.93;ReadPosRankSum=2.334;VQSLOD=0.5501;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	1/1:1,2:3:2.68:49,3,0	1/1:10,0:7:0.94:2,1,0	./.	0/1:10,9:20:3.67:89,0,4	0/1:13,0:14:12.95:13,0,109	0/0:3,0:3:2.99:0,3,24	0/0:14,0:13:6.01:0,6,55	1/1:6,0:6:6.02:95,6,0	0/0:1,0:1:3:0,3,28	./.	1/1:2,0:2:3:25,3,0	0/1:12,0:13:1.20:1,0,174	0/0:3,0:5:2.28:0,2,17	1/1:9,0:10:9:99,9,0	1/1:6,0:8:14.99:145,15,0	0/1:10,3:13:5.69:184,0,6	0/0:14,0:14:10.76:0,11,73	0/0:4,0:3:3:0,3,26	0/0:5,0:5:3:0,3,25	./.	./.	1/1:8,0:8:6:73,6,0	1/1:5,0:5:2.99:24,3,0	0/0:3,0:5:3.01:0,3,38	./.	./.	./.
chr10	39361160	.	A	ATG	370.53	PASS	AB=1.000;AC=19;AF=0.380;AN=50;BaseQRankSum=0.364;DP=171;FS=3.222;HRun=0;HaplotypeScore=54.1689;InbreedingCoeff=0.3724;MQ=57.53;MQ0=5;MQRankSum=1.173;QD=5.08;ReadPosRankSum=-0.917;VQSLOD=2.2897;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:4,0:4:0:0,0,0	0/0:2,0:2:2.97:0,3,21	1/1:3,0:3:1.36:3,1,0	./.	0/0:12,0:12:11.56:0,12,79	1/1:5,9:14:1.46:102,1,0	1/1:8,0:8:16.21:125,16,0	0/0:8,0:5:5.94:0,6,44	0/0:7,0:7:17.64:0,18,123	0/0:1,0:1:0:0,0,0	0/0:4,0:4:2.99:0,3,24	0/0:4,0:4:5.58:0,6,32	0/1:14,0:14:15.91:126,0,16	0/1:5,0:5:2.05:25,0,2	0/0:9,0:9:20.17:0,20,143	0/1:8,0:8:25.20:25,0,85	0/0:15,0:15:27.91:0,28,205	0/0:13,0:13:22.08:0,22,172	1/1:3,0:3:7.36:26,7,0	0/0:4,0:4:3:0,3,25	./.	1/1:4,0:4:5.99:50,6,0	0/0:6,0:6:11.67:0,12,88	0/0:7,0:7:14.65:0,15,108	0/1:4,0:4:9.49:9,0,42	1/1:2,0:2:4.74:17,5,0	1/1:3,0:3:2.50:9,2,0	./.
chr10	39361168	.	GTA	G	143.27	PASS	AB=0.870;AC=13;AF=0.260;AN=50;BaseQRankSum=5.208;DP=193;FS=4.281;HRun=0;HaplotypeScore=60.5402;InbreedingCoeff=0.4302;MQ=51.53;MQ0=8;MQRankSum=-4.196;QD=2.81;ReadPosRankSum=-0.782;VQSLOD=1.0835;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:1,0:1:2.94:0,3,18	1/1:2,0:2:0.41:5,0,0	./.	0/0:12,0:12:20.85:0,21,304	0/1:15,0:14:16.23:16,0,148	0/0:8,0:8:20.59:0,21,385	0/1:16,1:9:17.20:63,0,17	0/0:6,0:6:17.96:0,18,268	0/0:3,0:3:2.99:0,3,24	0/0:5,0:5:3:0,3,27	0/0:6,0:6:3.01:0,3,57	0/0:13,0:13:33.11:0,33,616	0/0:5,0:5:12.04:0,12,211	0/0:10,0:10:21:0,21,333	0/0:8,0:8:24.05:0,24,377	0/0:15,0:15:32.62:0,33,411	0/0:15,0:15:4.54:0,5,190	1/1:0,3:3:9.01:89,9,0	./.	0/1:3,3:6:0:0,0,0	0/0:4,0:4:9.03:0,9,172	0/0:6,0:6:13.86:0,14,207	0/0:10,0:10:25.33:0,25,431	0/0:6,0:6:5.73:0,6,189	1/1:1,2:3:5.99:48,6,0	1/1:0,4:4:5.84:41,6,0	1/1:0,1:1:2.90:16,3,0
chr10	39361172	.	GTA	G	42.78	PASS	AB=0.929;AC=10;AF=0.200;AN=50;BaseQRankSum=6.252;DP=206;FS=1.117;HRun=0;HaplotypeScore=62.9610;InbreedingCoeff=0.5789;MQ=51.58;MQ0=8;MQRankSum=-4.432;QD=1.30;ReadPosRankSum=-1.023;VQSLOD=1.2184;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	0/0:2,0:2:5.94:0,6,42	0/1:1,0:2:0.97:33,0,1	./.	0/0:12,0:12:20.87:0,21,307	0/0:15,0:14:14.78:0,15,194	0/0:8,0:8:20.59:0,21,387	1/1:12,5:9:13.76:98,14,0	0/0:7,0:7:20.97:0,21,310	0/0:4,0:4:8.99:0,9,83	0/0:6,0:6:3:0,3,27	0/0:7,0:7:6.02:0,6,92	0/0:13,0:13:33.11:0,33,620	0/0:6,0:6:15.05:0,15,272	0/0:12,0:12:27.01:0,27,399	0/0:8,0:8:24.02:0,24,354	0/0:15,0:15:34.84:0,35,433	0/0:15,0:15:5.39:0,5,208	1/1:3,0:3:6.23:19,6,0	./.	0/1:5,1:6:0:0,0,0	0/0:6,0:6:15.02:0,15,222	0/0:7,0:7:16.87:0,17,248	0/0:12,0:12:31.31:0,31,477	0/0:6,0:6:5.74:0,6,207	0/0:3,0:3:0.40:0,0,32	1/1:4,0:4:3.63:10,4,0	1/1:1,0:1:2.22:7,2,0
chr10	39361176	.	GTA	G	251.59	PASS	AB=0.833;AC=12;AF=0.240;AN=50;BaseQRankSum=5.673;DP=212;FS=4.061;HRun=0;HaplotypeScore=62.7133;InbreedingCoeff=0.5931;MQ=48.77;MQ0=8;MQRankSum=-6.082;QD=5.03;ReadPosRankSum=-1.129;VQSLOD=2.2821;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:3,0:3:8.95:0,9,85	./.	0/0:2,0:2:6.02:0,6,82	0/0:12,0:12:20.87:0,21,307	0/0:15,0:14:18.06:0,18,269	0/0:7,1:8:20.59:0,21,387	1/1:16,1:9:15.03:185,15,0	0/0:7,0:7:20.97:0,21,311	0/0:4,0:4:9.47:0,9,37	0/0:6,0:6:1.82:0,2,5	0/0:7,0:7:6.02:0,6,100	0/0:13,0:13:33.08:0,33,595	0/0:6,0:6:15.05:0,15,249	0/0:13,0:13:24.01:0,24,376	0/0:8,0:8:21.52:0,22,334	0/0:17,0:17:41.62:0,42,512	0/1:14,0:14:9.23:9,0,125	1/1:0,3:3:9.02:100,9,0	./.	1/1:4,3:7:2.98:21,3,0	0/0:7,0:7:18.06:0,18,300	0/0:7,0:7:19.88:0,20,292	0/0:12,0:12:28.34:0,28,476	0/0:6,0:6:15.05:0,15,248	0/1:2,2:4:5.70:48,0,6	1/1:0,4:4:5.29:22,5,0	1/1:0,1:1:2.84:14,3,0
chr10	39361180	.	GTA	G	436.75	PASS	AB=0.941;AC=16;AF=0.308;AN=52;BaseQRankSum=6.463;DP=231;FS=0.000;HRun=0;HaplotypeScore=63.2154;InbreedingCoeff=0.6283;MQ=51.95;MQ0=9;MQRankSum=-6.395;QD=6.93;ReadPosRankSum=-0.571;VQSLOD=2.7647;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	0/0:4,0:4:11.97:0,12,144	0/0:2,0:3:8.60:0,9,75	0/0:4,0:4:12.04:0,12,170	0/0:11,0:11:20.87:0,21,307	0/0:17,0:16:24.06:0,24,342	0/0:8,0:8:20.59:0,21,387	1/1:11,5:8:14.33:125,14,0	0/0:7,0:7:20.97:0,21,311	1/1:0,4:4:11.66:83,12,0	1/1:1,5:6:3.01:45,3,0	0/0:7,0:7:6.02:0,6,100	0/0:12,0:12:30.10:0,30,576	0/0:7,0:7:18.05:0,18,294	0/0:12,0:12:24.01:0,24,376	0/0:9,0:9:24.04:0,24,358	0/0:18,0:18:44.40:0,44,562	0/1:13,2:15:61.73:173,0,62	0/1:5,0:5:13.96:67,0,14	./.	1/1:5,2:7:2.22:7,2,0	0/0:7,0:7:18.06:0,18,301	0/0:10,0:10:28.89:0,29,403	0/0:14,0:14:33.09:0,33,537	0/0:9,0:9:21.06:0,21,311	1/1:2,2:4:11.59:75,12,0	1/1:4,0:4:3.92:14,4,0	1/1:2,0:1:2.68:11,3,0
chr10	39361188	.	GTA	G	1240.27	PASS	AB=0.933;AC=19;AF=0.352;AN=54;BaseQRankSum=5.557;DP=268;FS=9.474;HRun=0;HaplotypeScore=68.1993;InbreedingCoeff=0.7727;MQ=53.74;MQ0=7;MQRankSum=-6.403;QD=14.26;ReadPosRankSum=-2.776;VQSLOD=2.0581;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	0/0:5,0:5:14.98:0,15,188	0/0:7,0:5:10.90:0,11,105	0/0:9,0:6:17.99:0,18,231	0/0:11,0:11:20.87:0,21,307	0/0:15,0:15:21.07:0,21,308	0/0:9,0:9:23.86:0,24,429	1/1:9,9:11:23.09:288,23,0	0/0:7,0:7:20.96:0,21,310	1/1:0,6:6:17.68:175,18,0	1/1:1,5:6:3.01:45,3,0	0/0:7,0:7:6.02:0,6,100	0/0:12,0:12:30.10:0,30,568	0/0:7,0:7:18.06:0,18,308	0/0:13,0:13:27.02:0,27,419	0/0:10,0:10:26.94:0,27,377	0/0:17,1:18:37.79:0,38,440	0/1:13,1:14:11.38:210,0,11	1/1:7,7:14:9.73:327,10,0	1/1:4,1:5:3:25,3,0	1/1:3,7:10:2.99:23,3,0	0/0:9,0:9:24.08:0,24,387	0/0:9,0:9:25.90:0,26,379	0/0:16,0:16:39.08:0,39,601	0/0:11,0:11:24.07:0,24,361	1/1:2,3:5:14.66:132,15,0	1/1:4,2:6:11.90:142,12,0	1/1:2,1:2:5.89:61,6,0
chr10	39361321	.	G	GT	4325.45	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-9.876;DP=535;FS=3.865;HRun=1;HaplotypeScore=60.8458;InbreedingCoeff=0.9576;MQ=73.13;MQ0=1;MQRankSum=-1.861;QD=36.66;ReadPosRankSum=-0.954;VQSLOD=4.7001;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:78.25:0,78,1012	0/0:9,0:9:27.09:0,27,351	0/0:25,0:23:61.08:0,61,781	0/0:32,0:32:81.23:0,81,1015	0/0:26,0:26:75.24:0,75,973	0/0:21,0:21:57.19:0,57,740	0/0:23,0:23:66.21:0,66,857	1/1:0,21:21:63.20:924,63,0	0/0:14,0:14:42.14:0,42,545	0/0:19,0:19:57.19:0,57,740	0/0:11,0:11:33.11:0,33,428	0/0:18,0:18:48.16:0,48,624	0/0:17,0:17:51.13:0,51,644	0/0:20,0:20:60.18:0,60,765	0/0:23,0:23:66.21:0,66,856	0/0:13,0:13:36.12:0,36,467	0/0:24,0:24:65.16:0,65,851	0/0:25,0:25:63.20:0,63,815	1/1:1,12:12:33.11:494,33,0	1/1:0,7:7:21.07:314,21,0	1/1:1,36:37:81.13:1213,81,0	0/0:8,0:8:24.08:0,24,312	0/0:15,0:15:45.15:0,45,584	0/0:29,0:28:72:0,72,914	0/0:14,0:14:42.12:0,42,529	1/1:0,15:15:45.15:674,45,0	1/1:3,12:15:36.12:539,36,0	1/1:0,8:9:1.38:166,1,0
chr10	39361387	.	AGT	A	2811.72	PASS	AB=0.640;AC=36;AF=0.720;AN=50;BaseQRankSum=-2.586;DP=547;FS=3.383;HRun=0;HaplotypeScore=92.2183;InbreedingCoeff=0.6376;MQ=62.68;MQ0=7;MQRankSum=2.521;QD=7.66;ReadPosRankSum=2.296;VQSLOD=3.3489;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:26:20.26:97,20,0	1/1:1,9:10:21.06:230,21,0	./.	./.	1/1:14,7:20:15.04:164,15,0	1/1:7,10:18:20.89:211,21,0	1/1:13,3:16:6.02:66,6,0	0/0:27,0:25:11.86:0,12,94	1/1:15,6:21:15.04:164,15,0	1/1:15,0:22:17.04:84,17,0	1/1:7,0:12:8.52:42,9,0	1/1:12,1:15:8.69:61,9,0	1/1:12,7:20:20.44:210,20,0	0/1:8,7:16:50.45:95,0,50	1/1:10,14:24:27.07:296,27,0	1/1:12,14:27:35.72:375,36,0	1/1:18,13:33:26.32:257,26,0	1/1:13,0:16:5.58:37,6,0	0/0:15,0:14:10.24:0,10,82	0/0:5,0:6:5.97:0,6,46	0/0:32,0:33:30.50:0,30,260	1/1:6,5:11:14.97:149,15,0	1/1:10,1:11:3.01:33,3,0	1/1:19,9:27:4.57:210,5,0	0/1:7,12:19:20.80:206,0,21	0/0:17,0:17:12.02:0,12,136	0/0:21,0:25:39.03:0,39,391	./.
chr10	39361966	.	GT	G	2145.73	PASS	AB=0.903;AC=16;AF=0.286;AN=56;BaseQRankSum=5.845;DP=683;FS=2.674;HRun=13;HaplotypeScore=76.2721;InbreedingCoeff=0.7780;MQ=65.36;MQ0=2;MQRankSum=0.487;QD=9.29;ReadPosRankSum=0.666;VQSLOD=3.1571;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:28:53.04:0,53,524	0/0:10,0:10:18.03:0,18,175	0/0:31,1:23:11.44:0,11,277	0/0:28,0:14:3.24:0,3,122	0/0:38,1:40:71.05:0,71,829	0/0:19,2:21:29.08:0,29,428	0/0:9,1:10:5.13:0,5,212	1/1:15,15:31:19.11:302,19,0	0/1:20,2:22:12.19:12,0,339	0/0:26,1:27:35.17:0,35,499	0/0:23,1:25:37.96:0,38,500	0/0:14,0:14:24.02:0,24,226	0/0:17,0:20:26:0,26,261	0/0:14,0:14:31.29:0,31,294	0/1:21,3:24:11.64:12,0,384	0/0:26,1:30:47.04:0,47,605	0/0:36,0:38:76.22:0,76,850	0/0:23,1:27:46.87:0,47,590	1/1:10,11:20:32.73:240,33,0	1/1:6,22:28:53.52:394,54,0	1/1:2,9:11:26.85:197,27,0	0/0:20,2:22:30.60:0,31,418	0/0:24,1:27:43.82:0,44,560	0/0:12,0:13:29.88:0,30,277	0/0:7,0:26:33.95:0,34,194	1/1:6,20:29:37.83:423,38,0	1/1:8,36:45:53.35:545,53,0	1/1:9,11:20:14.09:218,14,0
chr10	39363673	.	TCC	T	1371.42	PASS	AB=0.972;AC=23;AF=0.411;AN=56;BaseQRankSum=4.747;DP=422;FS=6.062;HRun=3;HaplotypeScore=71.4615;InbreedingCoeff=0.6537;MQ=42.65;MQ0=35;MQRankSum=-3.885;QD=5.94;ReadPosRankSum=-1.196;VQSLOD=-0.6583;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:17,0:14:2.13:74,0,2	0/0:4,0:4:12.03:0,12,170	0/1:18,0:5:5.47:5,0,83	0/0:41,0:13:1.22:0,1,88	0/0:7,0:7:17.93:0,18,257	0/0:15,0:15:20.56:0,21,272	0/0:18,0:14:32.78:0,33,489	1/1:33,0:29:32.84:230,33,0	0/0:11,0:8:12.48:0,12,200	1/1:17,1:17:9.40:197,9,0	1/1:14,0:13:8.10:96,8,0	0/0:9,0:8:18.51:0,19,234	1/1:8,3:10:17.45:171,17,0	0/0:4,3:6:0:0,0,0	0/0:13,0:11:24.01:0,24,385	0/0:8,0:8:21.50:0,21,311	0/0:19,0:18:28.10:0,28,591	1/1:4,1:3:2.98:21,3,0	1/1:24,0:18:26.13:160,26,0	1/1:20,0:17:11.66:101,12,0	1/1:19,0:14:14.57:122,15,0	0/0:7,0:6:8.19:0,8,143	0/0:4,0:4:9.03:0,9,146	0/0:18,0:17:45.36:0,45,675	0/0:10,0:8:20.79:0,21,281	1/1:24,0:20:2.51:180,3,0	0/1:10,1:10:30.53:60,0,31	1/1:16,0:13:8.85:147,9,0
chr10	39363721	.	C	CCT	1577.24	PASS	AB=0.848;AC=11;AF=0.196;AN=56;BaseQRankSum=-3.293;DP=399;FS=5.032;HRun=0;HaplotypeScore=79.4837;InbreedingCoeff=0.2469;MQ=45.94;MQ0=48;MQRankSum=1.875;QD=13.72;ReadPosRankSum=-1.881;VQSLOD=2.3677;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:14:24.07:0,24,288	0/0:9,0:9:12.02:0,12,133	0/0:23,0:6:9.03:0,9,106	0/0:26,0:11:24.06:0,24,271	0/1:10,0:10:3.57:4,0,173	0/0:12,0:9:2.03:0,2,116	0/0:16,0:14:36.05:0,36,393	1/1:10,12:18:0.59:447,1,0	0/0:20,0:16:30.06:0,30,358	0/0:17,0:16:35.85:0,36,393	0/0:7,0:7:5.57:0,6,72	0/0:16,0:14:26.89:0,27,253	0/0:9,0:9:23.23:0,23,221	0/0:9,0:8:11.94:0,12,98	0/0:17,0:16:16.59:0,17,362	0/0:11,0:10:14.93:0,15,146	0/0:13,0:11:17.31:0,17,184	0/0:5,0:3:3.01:0,3,36	1/1:14,1:9:8.98:92,9,0	0/1:9,3:12:11.92:270,0,12	0/1:12,6:12:28.27:306,0,28	0/0:15,0:14:26.62:0,27,271	0/0:8,0:7:12.01:0,12,119	0/0:17,0:15:17.88:0,18,199	0/0:15,0:14:6.01:0,6,150	0/1:17,3:15:44.86:297,0,45	0/1:7,2:9:13.93:208,0,14	1/1:7,2:4:6.02:96,6,0
chr10	39363775	.	GTAGATAGA	G	5730.31	PASS	AC=34;AF=0.654;AN=52;BaseQRankSum=-2.534;DP=480;FS=0.579;HRun=0;HaplotypeScore=147.3017;InbreedingCoeff=0.8896;MQ=58.70;MQ0=4;MQRankSum=-7.467;QD=19.90;ReadPosRankSum=1.959;VQSLOD=4.3883;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	1/1:0,7:7:14.96:269,15,0	0/0:18,0:13:7.76:0,8,273	0/0:13,0:11:3.01:0,3,57	1/1:9,15:24:11.52:226,12,0	1/1:3,17:19:32.98:723,33,0	1/1:7,11:18:18.02:401,18,0	0/0:25,0:21:21.04:0,21,464	1/1:10,16:26:29.97:592,30,0	1/1:9,0:17:18.11:253,18,0	1/1:3,0:18:10.85:172,11,0	1/1:6,11:17:14.92:246,15,0	1/1:6,5:11:12.04:300,12,0	1/1:1,6:7:9.03:229,9,0	1/1:12,11:24:27.09:664,27,0	1/1:4,11:15:17.93:342,18,0	1/1:6,7:14:6.02:130,6,0	./.	0/0:10,0:13:25.56:0,26,518	0/0:9,0:20:41.12:0,41,1211	0/0:6,0:21:29.11:0,29,807	1/1:10,10:20:18.45:377,18,0	1/1:5,13:18:11.91:205,12,0	1/1:5,10:15:12.04:277,12,0	1/1:5,12:17:15.01:325,15,0	0/0:8,0:22:51.16:0,51,1545	0/0:10,0:20:32.32:0,32,851	0/0:2,0:5:15.03:0,15,394
chr10	39363883	.	GGTGCGTGTGTGTGTGTGTGT	G	6438.59	PASS	AB=0.931;AC=15;AF=0.268;AN=56;BaseQRankSum=-0.001;DP=605;FS=2.543;HRun=0;HaplotypeScore=307.7274;InbreedingCoeff=0.5264;MQ=58.99;MQ0=13;MQRankSum=-6.001;QD=34.07;ReadPosRankSum=-0.824;VQSLOD=3.4578;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:25:6.08:0,6,3518	0/0:9,0:9:24.05:0,24,881	0/0:26,0:11:23.84:0,24,339	0/0:18,0:11:14.09:0,14,608	0/0:25,0:25:69.06:0,69,3063	0/0:23,0:23:51.10:0,51,2531	0/0:34,0:34:81.04:0,81,3656	1/1:18,0:15:35.78:324,36,0	0/0:27,0:26:66.13:0,66,3876	0/1:9,0:23:68.50:69,0,3045	0/1:20,0:23:68.69:69,0,2645	0/0:24,0:24:62.79:0,63,2968	0/0:15,0:14:39.08:0,39,2445	0/0:18,0:18:42.10:0,42,2470	0/0:34,0:34:75.13:0,75,4397	0/0:26,0:26:74.88:0,75,4240	0/0:29,0:29:78.18:0,78,4171	0/1:12,0:16:99:105,0,1668	1/1:4,14:17:41.93:711,42,0	1/1:8,9:17:38.96:1435,39,0	0/1:18,1:19:99:300,0,209	0/0:19,0:19:54.04:0,54,2774	0/0:27,0:27:74.74:0,75,3321	0/0:27,0:27:57:0,57,3406	0/0:10,0:9:30.03:0,30,2048	0/1:11,8:19:99:1556,0,207	1/1:2,19:22:21.07:1156,21,0	1/1:10,3:13:35.93:714,36,0
chr10	39363887	.	CGT	C	4494.56	PASS	AB=0.889;AC=38;AF=0.731;AN=52;BaseQRankSum=-2.549;DP=607;FS=0.000;HRun=0;HaplotypeScore=122.9665;InbreedingCoeff=0.6867;MQ=55.72;MQ0=15;MQRankSum=-0.341;QD=9.97;ReadPosRankSum=3.359;VQSLOD=4.6258;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:44.51:0,45,357	1/1:7,1:9:5.85:47,6,0	./.	0/0:17,0:9:3.01:0,3,45	1/1:18,9:28:17.70:219,18,0	1/1:9,13:25:32.38:287,32,0	1/1:22,11:34:23.89:247,24,0	./.	1/1:13,14:29:50.64:507,51,0	0/0:22,0:22:31.56:0,32,307	0/0:24,0:24:29.97:0,30,254	1/1:16,6:25:18.02:142,18,0	1/1:6,8:13:24.06:266,24,0	1/1:9,11:20:18.05:200,18,0	1/1:13,14:30:56.44:553,56,0	1/1:15,9:26:29.75:294,30,0	1/1:18,11:29:35.93:380,36,0	0/0:16,0:16:19.26:0,19,176	1/1:15,0:14:5.68:28,6,0	1/1:16,0:15:22.73:112,23,0	1/1:18,0:18:2.84:14,3,0	0/1:15,5:21:33.33:247,0,33	1/1:20,7:29:32.75:326,33,0	1/1:14,14:30:40.80:400,41,0	0/0:12,0:11:18.04:0,18,232	0/1:18,0:18:17.29:86,0,17	1/1:20,0:20:19.89:98,20,0	1/1:13,0:13:8.52:42,9,0
chr10	39364473	.	A	ATT	2893.98	PASS	AB=0.850;AC=29;AF=0.518;AN=56;BaseQRankSum=-9.288;DP=580;FS=1.960;HRun=13;HaplotypeScore=114.8715;InbreedingCoeff=0.6971;MQ=67.05;MQ0=11;MQRankSum=-2.882;QD=9.68;ReadPosRankSum=-1.140;VQSLOD=2.1803;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:44:72.99:0,73,341	1/1:3,7:10:9.45:102,9,0	0/0:42,0:14:10.61:0,11,80	0/1:33,0:11:7.65:8,0,11	1/1:10,15:24:38.32:388,38,0	1/1:11,8:21:55.55:563,56,0	1/1:6,11:19:20.44:199,20,0	0/1:22,0:22:2.15:2,0,42	1/1:17,1:17:16.62:126,17,0	0/0:7,0:25:51.24:0,51,214	0/0:4,0:18:17.60:0,18,126	1/1:6,0:6:5.46:29,5,0	1/1:4,10:15:11.78:146,12,0	1/1:6,3:9:8.23:76,8,0	1/1:5,6:11:14.64:173,15,0	1/1:5,10:15:0.46:268,0,0	1/1:6,22:27:18.23:512,18,0	0/0:6,0:14:32.16:0,32,134	0/0:20,0:20:26.69:0,27,90	0/0:18,0:18:0.20:0,0,37	0/0:21,0:21:18.90:0,19,51	1/1:8,10:19:28.96:291,29,0	0/1:5,0:16:10.04:39,0,10	1/1:5,1:22:18.52:176,19,0	0/0:15,0:18:20.38:0,20,213	0/0:28,0:28:29.95:0,30,114	0/0:22,0:22:11.68:0,12,44	0/0:8,0:8:7.53:0,8,20
chr10	39364477	.	T	TA	4277.14	PASS	AB=1.000;AC=16;AF=0.286;AN=56;BaseQRankSum=0.419;DP=572;FS=13.204;HRun=0;HaplotypeScore=95.7773;InbreedingCoeff=0.8486;MQ=66.20;MQ0=18;MQRankSum=-0.809;QD=21.17;ReadPosRankSum=2.239;VQSLOD=5.5426;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:45:98.30:0,98,824	0/0:10,0:10:18.31:0,18,127	0/1:42,0:13:8.65:9,0,77	0/0:36,0:11:17.34:0,17,133	0/0:27,0:26:37.58:0,38,319	0/0:24,0:22:48.24:0,48,308	0/0:17,0:17:16.45:0,16,116	1/1:3,16:18:48.04:543,48,0	0/0:19,0:17:19.19:0,19,171	0/0:24,0:23:65.88:0,66,547	0/0:19,0:19:53.83:0,54,442	0/0:8,0:6:11.56:0,12,93	0/0:13,0:13:15.69:0,16,98	0/0:8,0:8:17.14:0,17,115	0/0:9,0:9:20.21:0,20,126	0/0:15,0:14:22.32:0,22,190	0/0:30,0:26:40.22:0,40,256	0/0:15,0:14:35.90:0,36,284	1/1:1,19:20:54.12:663,54,0	1/1:0,18:18:51.03:609,51,0	1/1:0,21:21:45.15:580,45,0	0/0:16,0:16:26.81:0,27,187	0/0:16,0:16:11.88:0,12,147	0/1:25,0:23:1.02:1,0,84	0/0:18,0:18:45.09:0,45,523	1/1:0,25:25:72.20:915,72,0	1/1:2,19:21:57.12:726,57,0	1/1:3,8:8:18.06:232,18,0
chr10	39364714	.	TACC	T	5226.10	PASS	AB=0.553;AC=13;AF=0.250;AN=52;BaseQRankSum=11.147;DP=512;FS=4.458;HRun=0;HaplotypeScore=68.5821;InbreedingCoeff=0.8927;MQ=47.04;MQ0=44;MQRankSum=-3.415;QD=36.04;ReadPosRankSum=-1.046;VQSLOD=5.0828;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:23:54.14:0,54,1195	0/0:10,0:10:27.09:0,27,620	./.	./.	0/0:24,0:24:59.87:0,60,1312	0/0:21,0:21:51.11:0,51,1124	0/0:23,0:17:48.11:0,48,1024	1/1:6,16:17:45.14:730,45,0	0/0:17,0:15:30.06:0,30,641	0/0:14,0:14:42.11:0,42,919	0/0:18,0:18:48.16:0,48,1102	0/0:20,0:19:42.08:0,42,916	0/0:11,0:9:27.02:0,27,570	0/0:11,0:11:21.07:0,21,483	0/0:20,0:19:42.08:0,42,917	0/0:19,0:16:48.10:0,48,1054	0/0:36,0:32:75.15:0,75,1621	0/0:18,0:14:39.13:0,39,898	1/1:3,14:13:39.09:634,39,0	1/1:0,22:22:42.14:715,42,0	1/1:3,25:25:48.16:818,48,0	0/0:13,0:13:36.12:0,36,814	0/0:17,0:17:45.11:0,45,988	0/0:20,0:15:30.10:0,30,690	0/0:18,0:18:51.18:0,51,1176	0/1:5,21:25:69.17:1000,0,69	1/1:1,24:24:63.22:1074,63,0	1/1:0,5:5:15.05:256,15,0
chr10	39367180	.	A	AT	2464.64	PASS	AC=14;AF=0.259;AN=54;BaseQRankSum=-3.719;DP=310;FS=13.735;HRun=7;HaplotypeScore=31.8658;InbreedingCoeff=0.8639;MQ=64.76;MQ0=0;MQRankSum=-4.195;QD=24.90;ReadPosRankSum=-1.808;VQSLOD=1.7240;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:20:51.08:0,51,492	0/0:7,0:7:15.01:0,15,139	0/0:4,0:3:3:0,3,29	0/0:12,0:8:8.85:0,9,97	0/0:11,0:11:24.04:0,24,232	0/0:23,0:23:60.09:0,60,579	0/0:1,0:1:2.99:0,3,24	1/1:13,16:29:66.17:770,66,0	0/0:4,0:4:12.02:0,12,115	0/0:14,0:14:33.04:0,33,315	0/0:10,0:10:27.04:0,27,261	0/0:8,0:8:18.02:0,18,168	0/0:9,0:9:24.04:0,24,232	0/0:8,0:8:15.02:0,15,145	0/0:7,0:7:18.03:0,18,174	0/0:5,0:5:12:0,12,110	0/0:28,0:28:72.11:0,72,695	0/0:15,0:15:36.04:0,36,341	1/1:7,12:19:45.08:525,45,0	1/1:3,5:8:17.97:197,18,0	1/1:2,2:4:6.02:72,6,0	0/0:3,0:3:9.01:0,9,87	0/0:5,0:5:9.01:0,9,87	./.	0/0:13,0:13:30.05:0,30,290	1/1:2,5:7:15.05:181,15,0	1/1:9,9:18:33.10:399,33,0	1/1:0,14:14:42.13:507,42,0
chr10	39367215	.	A	AT	2163.02	PASS	AC=12;AF=0.231;AN=52;BaseQRankSum=2.423;DP=253;FS=11.430;HRun=6;HaplotypeScore=30.6462;InbreedingCoeff=0.7900;MQ=63.18;MQ0=0;MQRankSum=-6.007;QD=27.04;ReadPosRankSum=-3.405;VQSLOD=1.2946;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:16:45.10:0,45,458	0/0:4,0:4:9.02:0,9,92	0/0:7,0:4:0.02:0,0,73	0/0:13,0:7:1.85:0,2,95	0/0:11,0:11:27.06:0,27,275	0/0:22,0:22:63.14:0,63,642	./.	1/1:7,28:29:72.23:898,72,0	0/0:4,0:4:9.02:0,9,92	0/0:8,0:8:18.04:0,18,180	0/0:6,0:6:15.02:0,15,146	0/0:3,0:3:6.01:0,6,61	0/0:8,0:8:24.05:0,24,245	0/0:6,0:6:18.04:0,18,183	0/0:3,0:3:9.02:0,9,92	0/0:5,0:5:15.03:0,15,153	0/0:23,0:23:63.10:0,63,632	0/0:12,0:16:37.86:0,38,362	1/1:2,11:11:27.08:329,27,0	1/1:1,12:13:36.11:444,36,0	./.	0/0:3,0:3:9.02:0,9,92	0/0:3,0:3:9.02:0,9,92	0/0:1,0:1:3.01:0,3,31	0/0:10,0:10:27.05:0,27,269	1/1:0,5:5:15.05:188,15,0	1/1:1,8:9:24.08:301,24,0	1/1:0,5:5:15.04:177,15,0
chr10	39370023	.	C	CTT	2334.17	PASS	AB=0.917;AC=9;AF=0.161;AN=56;BaseQRankSum=-5.740;DP=559;FS=2.978;HRun=11;HaplotypeScore=68.2384;InbreedingCoeff=0.8666;MQ=65.13;MQ0=0;MQRankSum=0.013;QD=25.10;ReadPosRankSum=-0.195;VQSLOD=3.5333;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,17:20:47.19:657,47,0	0/0:12,0:13:23.96:0,24,282	0/1:9,1:9:13.88:14,0,160	0/0:12,0:13:20.16:0,20,160	0/0:37,0:37:83.77:0,84,797	0/0:35,0:35:84.08:0,84,815	0/0:14,0:14:29.97:0,30,285	0/0:17,0:18:28.50:0,28,265	0/0:16,0:16:42.05:0,42,407	1/1:3,13:20:41.63:571,42,0	1/1:4,13:19:41.62:553,42,0	0/0:16,0:16:15.09:0,15,325	0/0:24,0:25:65.79:0,66,615	0/0:16,0:16:45.07:0,45,436	0/0:20,0:20:51.01:0,51,495	0/0:21,0:23:52.09:0,52,498	0/0:17,0:19:50.55:0,51,460	1/1:4,18:23:50.66:703,51,0	0/0:23,0:22:54.06:0,54,524	0/0:21,0:23:47.49:0,47,431	0/0:24,0:25:50.93:0,51,537	0/0:16,0:16:39:0,39,378	0/0:17,0:17:45.04:0,45,431	0/0:15,0:15:42.04:0,42,407	0/0:16,0:16:36:0,36,349	0/0:23,0:23:54.05:0,54,524	0/0:33,0:33:75.02:0,75,727	0/0:10,0:10:30.05:0,30,291
chr10	39371015	.	CTATT	C	1358.41	PASS	AB=0.846;AC=11;AF=0.250;AN=44;BaseQRankSum=3.721;DP=291;FS=2.818;HRun=0;HaplotypeScore=56.5778;InbreedingCoeff=0.5768;MQ=61.57;MQ0=0;MQRankSum=2.165;QD=14.45;ReadPosRankSum=-0.985;VQSLOD=2.8827;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:12.04:0,12,285	0/0:2,0:4:6.02:0,6,109	./.	./.	0/0:10,0:10:6.02:0,6,121	0/0:13,0:13:24.07:0,24,519	0/0:7,0:7:6.02:0,6,142	1/1:27,0:27:6:54,6,0	0/0:3,0:4:6.02:0,6,110	0/0:11,0:11:15.05:0,15,356	0/0:14,0:14:18.06:0,18,427	0/0:4,0:6:6.02:0,6,105	0/0:8,0:8:3.01:0,3,71	0/0:6,0:6:6.02:0,6,142	0/0:7,0:9:6.02:0,6,93	0/0:7,0:9:3.01:0,3,52	0/0:14,0:22:27.08:0,27,449	0/0:24,0:24:39.11:0,39,861	1/1:8,10:18:30.10:471,30,0	1/1:7,1:8:3.01:47,3,0	./.	./.	./.	./.	0/0:11,0:11:9.03:0,9,214	0/1:9,2:11:62.17:85,0,62	1/1:8,7:15:21.07:330,21,0	1/1:4,11:15:33.11:519,33,0
chr10	39371344	.	T	TCTC	14876.34	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-15.394;DP=609;FS=7.899;HRun=0;HaplotypeScore=76.6727;InbreedingCoeff=0.9992;MQ=74.50;MQ0=2;MQRankSum=-5.118;QD=55.10;ReadPosRankSum=-0.445;VQSLOD=6.7027;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,34:37:80.95:1867,81,0	0/0:10,0:10:30.10:0,30,512	0/0:20,0:20:54.16:0,54,874	0/0:29,0:27:75.19:0,75,1179	0/0:16,0:16:44.97:0,45,704	0/0:18,0:18:51.16:0,51,840	0/0:13,0:13:33.11:0,33,560	1/1:6,31:37:87.25:1743,87,0	0/0:17,0:17:45.15:0,45,743	1/1:1,20:22:63.21:1389,63,0	1/1:0,13:13:36.12:830,36,0	0/0:19,0:19:57.20:0,57,971	0/0:35,0:35:99:0,99,1658	0/0:18,0:18:51.16:0,51,843	0/0:24,0:24:69.24:0,69,1177	0/0:21,0:21:63.21:0,63,1047	0/0:24,0:24:66.20:0,66,1096	1/1:1,21:24:57.20:1314,57,0	1/1:6,15:22:59.99:1244,60,0	1/1:0,11:11:30.03:641,30,0	1/1:2,31:33:63.22:1453,63,0	0/0:15,0:15:45.15:0,45,767	0/0:7,0:7:21.07:0,21,354	0/0:25,0:25:63.18:0,63,1044	0/0:28,0:28:81.28:0,81,1377	1/1:1,24:26:78.27:1766,78,0	1/1:1,25:26:75.21:1679,75,0	1/1:1,12:14:42.14:951,42,0
chr10	39372054	.	TC	T	4249.42	PASS	AB=0.931;AC=9;AF=0.161;AN=56;BaseQRankSum=11.844;DP=766;FS=0.383;HRun=1;HaplotypeScore=73.0341;InbreedingCoeff=0.9089;MQ=85.85;MQ0=0;MQRankSum=-1.999;QD=31.71;ReadPosRankSum=3.132;VQSLOD=4.5743;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,50:50:99:1930,138,0	0/0:10,0:10:30.10:0,30,479	0/0:23,0:23:69.23:0,69,1059	0/0:34,0:34:93.25:0,93,1403	0/0:31,0:31:87.30:0,87,1378	0/0:30,0:30:90.28:0,90,1380	0/0:39,0:39:99:0,117,1786	0/0:45,0:45:99:0,135,2012	0/0:26,0:26:78.19:0,78,1146	1/1:0,28:28:84.28:1164,84,0	1/1:0,19:19:57.15:775,57,0	0/0:25,0:25:72.25:0,72,1151	0/0:29,0:29:87.28:0,87,1367	0/0:30,0:30:90.29:0,90,1405	0/0:32,0:32:96.33:0,96,1529	0/0:24,0:24:72.25:0,72,1151	0/0:31,0:31:93.30:0,93,1462	1/1:0,10:10:27.09:378,27,0	0/0:33,0:33:99:0,99,1550	0/0:23,0:23:69.24:0,69,1100	0/0:60,0:60:99:0,178,2817	0/0:23,0:23:69.24:0,69,1103	0/0:18,0:18:54.18:0,54,849	0/0:18,0:18:54.18:0,54,863	0/0:13,0:13:39.13:0,39,623	0/1:25,2:27:2.66:3,0,1118	0/0:29,0:29:87.26:0,87,1342	0/0:6,0:6:18.06:0,18,288
chr10	39372582	.	T	TTCC	3197.12	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=8.895;DP=699;FS=28.297;HRun=0;HaplotypeScore=111.0015;InbreedingCoeff=0.9844;MQ=55.78;MQ0=15;MQRankSum=-2.679;QD=22.36;ReadPosRankSum=-3.717;VQSLOD=1.1802;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:84.23:0,84,1145	0/0:7,0:7:18.06:0,18,265	0/0:24,0:10:17.94:0,18,193	0/0:45,0:25:35.20:0,35,418	0/0:34,0:33:62.53:0,63,807	0/0:29,0:29:63.71:0,64,1069	0/0:32,0:31:77.24:0,77,1016	1/1:13,19:34:42.16:885,42,0	0/0:28,0:27:68.25:0,68,1046	0/0:32,0:30:75.22:0,75,1079	0/0:13,0:12:21:0,21,281	0/0:16,0:15:36.12:0,36,527	0/0:33,0:33:90.28:0,90,1278	0/0:23,0:23:60.19:0,60,856	0/0:35,0:35:90.24:0,90,1211	0/0:31,0:31:87.25:0,87,1222	0/0:23,0:23:60.14:0,60,804	0/0:28,0:29:59.50:0,60,875	1/1:7,10:16:30.07:494,30,0	1/1:6,10:16:17.99:318,18,0	1/1:9,15:24:12.01:208,12,0	0/0:27,0:27:72.23:0,72,1022	0/0:14,0:14:30.08:0,30,406	0/0:27,0:27:63.18:0,63,886	0/0:18,0:18:51.08:0,51,671	1/1:8,18:26:31.20:951,31,0	1/1:3,15:18:18.06:339,18,0	1/1:6,1:7:14.95:198,15,0
chr10	39374123	.	G	GA	3753.75	PASS	AB=0.929;AC=15;AF=0.268;AN=56;BaseQRankSum=-2.504;DP=616;FS=6.530;HRun=8;HaplotypeScore=95.6244;InbreedingCoeff=0.9209;MQ=60.23;MQ0=1;MQRankSum=-3.986;QD=24.06;ReadPosRankSum=-2.198;VQSLOD=2.9498;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:57.02:0,57,521	0/0:14,0:14:36.02:0,36,330	0/0:13,0:11:17.99:0,18,165	0/1:12,1:11:5.88:6,0,153	0/0:27,0:27:69.03:0,69,631	0/0:21,0:21:57.01:0,57,517	0/0:19,0:19:28.32:0,28,416	1/1:7,24:31:75.21:857,75,0	0/0:22,0:22:57.03:0,57,522	0/0:28,0:28:80.83:0,81,726	0/0:26,0:26:60.01:0,60,544	0/0:19,0:19:47.99:0,48,431	0/0:17,0:17:39.01:0,39,356	0/0:21,0:21:59.99:0,60,537	0/0:25,0:25:54.03:0,54,494	0/0:26,0:26:60:0,60,544	0/0:24,0:24:69.04:0,69,631	0/0:24,0:24:35.98:0,36,448	1/1:6,8:14:27.08:311,27,0	1/1:4,21:25:60.18:689,60,0	1/1:4,7:11:15.04:171,15,0	0/0:23,0:23:54.01:0,54,494	0/0:26,0:26:72.02:0,72,654	0/0:23,0:23:66.04:0,66,604	0/0:32,0:32:75.03:0,75,682	1/1:6,21:27:44.70:753,45,0	1/1:7,22:29:66.20:759,66,0	1/1:1,5:6:18.05:208,18,0
chr10	39374145	.	ATAAG	A	4434.14	PASS	AB=1.000;AC=29;AF=0.558;AN=52;BaseQRankSum=13.608;DP=584;FS=0.000;HRun=0;HaplotypeScore=120.8119;InbreedingCoeff=0.9123;MQ=56.21;MQ0=1;MQRankSum=-6.291;QD=13.60;ReadPosRankSum=2.742;VQSLOD=4.2106;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:32:24.03:224,24,0	0/0:14,0:14:30.10:0,30,691	0/0:9,0:6:0.47:0,0,1	./.	0/0:26,0:26:54.11:0,54,1018	1/1:6,15:21:33.11:521,33,0	1/1:9,8:17:18.06:284,18,0	0/1:20,0:20:0:0,0,0	0/0:22,0:22:33.11:0,33,781	1/1:12,0:27:32.99:293,33,0	1/1:11,0:26:26.92:232,27,0	0/0:16,0:16:33.10:0,33,734	1/1:3,12:15:24.08:379,24,0	1/1:7,19:26:39.13:616,39,0	0/0:26,0:26:63.14:0,63,1291	0/0:24,0:24:45.10:0,45,909	0/0:32,0:32:62.93:0,63,1008	1/1:13,0:24:6.01:56,6,0	1/1:6,0:13:17.97:155,18,0	1/1:8,0:18:33.03:306,33,0	./.	0/0:28,0:28:56.10:0,56,920	0/0:26,0:26:42.13:0,42,946	0/0:21,0:21:27.04:0,27,501	1/1:7,28:35:39.13:616,39,0	1/1:10,0:24:42.05:391,42,0	1/1:8,0:19:33.04:307,33,0	1/1:5,0:8:6.01:56,6,0
chr10	39374276	.	T	TAC	1013	PASS	AB=0.897;AC=24;AF=0.462;AN=52;BaseQRankSum=-2.637;DP=611;FS=0.000;HRun=0;HaplotypeScore=93.5831;InbreedingCoeff=-0.0621;MQ=54.41;MQ0=13;MQRankSum=-1.450;QD=2.82;ReadPosRankSum=-0.081;VQSLOD=1.9871;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:17:3.01:41,3,0	0/1:8,0:8:25.59:39,0,26	./.	./.	1/1:12,8:20:6.02:89,6,0	1/1:12,0:20:2.32:9,2,0	0/0:19,0:27:15.15:0,15,71	0/1:30,0:29:0:0,0,0	1/1:4,7:11:2.90:44,3,0	0/1:21,1:22:46:52,0,46	0/1:17,0:16:23.45:48,0,23	0/1:19,1:20:65.43:71,0,65	0/0:18,0:18:7.10:0,7,50	0/0:20,0:20:16:0,16,121	0/1:14,5:19:26.74:38,0,27	1/1:15,1:16:1.99:72,2,0	0/1:27,3:30:50.36:255,0,50	0/1:10,7:18:21.98:34,0,22	0/0:18,0:19:2.84:0,3,14	0/0:12,0:19:11.34:0,11,56	0/0:59,0:58:15.26:0,15,62	1/1:16,4:20:2.23:43,2,0	0/1:10,6:17:33.79:141,0,34	0/1:18,12:32:99:152,0,165	0/0:21,0:21:27.98:0,28,275	0/1:21,0:22:15.81:36,0,16	0/0:10,0:19:10.93:0,11,55	0/1:14,0:17:0.51:1,0,20
chr10	39375402	.	G	GT	8024.51	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-0.091;DP=644;FS=7.965;HRun=2;HaplotypeScore=65.7097;InbreedingCoeff=0.9997;MQ=70.32;MQ0=0;MQRankSum=-1.459;QD=39.14;ReadPosRankSum=1.338;VQSLOD=5.2920;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:75.14:0,75,852	0/0:12,0:12:27.06:0,27,319	0/0:31,0:26:69:0,69,751	0/0:20,0:17:45.02:0,45,491	0/0:28,0:28:81.24:0,81,991	0/0:25,0:25:69.20:0,69,842	0/0:23,0:23:63.17:0,63,754	1/1:3,29:32:81.22:1080,81,0	0/0:22,0:22:66.16:0,66,778	0/0:30,0:30:90.26:0,90,1092	0/0:19,0:19:54.16:0,54,658	0/0:15,0:15:39.11:0,39,471	0/0:15,0:15:45.14:0,45,557	0/0:12,0:12:36.10:0,36,432	0/0:23,0:23:66.16:0,66,778	0/0:13,0:13:39.12:0,39,483	0/0:29,0:29:84.15:0,84,957	0/0:21,0:21:60.18:0,60,730	1/1:2,34:35:99:1329,99,0	1/1:2,22:24:72.23:1004,72,0	1/1:0,23:23:66.22:950,66,0	0/0:25,0:25:75.21:0,75,903	0/0:15,0:15:45.12:0,45,534	0/0:15,0:15:41.98:0,42,445	0/0:17,0:17:51.13:0,51,607	1/1:1,35:36:99:1510,105,0	1/1:0,37:38:99:1503,105,0	1/1:0,16:16:45.15:648,45,0
chr10	39376485	.	TA	T	2228.41	PASS	AB=0.644;AC=42;AF=0.750;AN=56;BaseQRankSum=3.557;DP=575;FS=1.904;HRun=17;HaplotypeScore=71.2790;InbreedingCoeff=0.1788;MQ=81.13;MQ0=2;MQRankSum=-0.747;QD=4.54;ReadPosRankSum=4.424;VQSLOD=1.2324;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:11,11:23:36.92:102,0,37	1/1:4,6:12:12.78:62,13,0	0/0:35,1:19:12.99:0,13,66	0/0:23,3:20:14.16:0,14,80	1/1:11,7:19:14.87:95,15,0	1/1:8,12:24:10.58:133,11,0	1/1:4,8:14:16.56:89,17,0	0/1:12,3:22:7.94:53,0,8	1/1:7,6:13:13.40:72,13,0	0/1:6,8:15:0.87:93,0,1	1/1:9,4:15:3.46:64,3,0	1/1:8,12:22:9.36:138,9,0	1/1:15,8:24:19.15:105,19,0	1/1:13,22:36:4.81:195,5,0	1/1:10,16:30:15.83:165,16,0	1/1:7,11:21:17.25:177,17,0	0/1:10,11:23:24.03:136,0,24	0/1:11,12:26:10.33:115,0,10	1/1:11,2:19:20.93:83,21,0	1/1:6,2:18:5.66:64,6,0	1/1:9,0:18:13.65:41,14,0	0/1:6,8:14:28.41:79,0,28	0/1:4,5:10:28.08:53,0,28	0/1:10,6:20:66.84:82,0,67	0/0:16,0:20:14.11:0,14,188	1/1:9,2:26:21.17:114,21,0	1/1:5,1:19:10.01:58,10,0	1/1:0,0:4:8.15:23,8,0
chr10	39376841	.	G	GA	5625.35	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=14.394;DP=632;FS=0.000;HRun=2;HaplotypeScore=72.9471;InbreedingCoeff=0.9995;MQ=92.01;MQ0=0;MQRankSum=0.316;QD=36.06;ReadPosRankSum=-2.334;VQSLOD=4.3710;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,105,1301	0/0:13,0:13:36.11:0,36,446	0/0:26,0:26:36.18:0,36,720	0/0:26,0:26:31.93:0,32,548	0/0:22,0:22:60.15:0,60,724	0/0:15,0:15:39.11:0,39,472	0/0:29,0:29:87.23:0,87,1049	1/1:0,29:29:78.21:1004,78,0	0/0:27,0:27:81.23:0,81,978	0/0:24,0:24:66.21:0,66,818	0/0:12,0:12:36.10:0,36,434	0/0:34,0:34:99:0,102,1251	0/0:15,0:15:42.13:0,42,521	0/0:32,0:32:96.30:0,96,1188	0/0:24,0:24:63.19:0,63,770	0/0:21,0:21:63.20:0,63,781	0/0:25,0:25:69.21:0,69,846	0/0:17,0:17:51.16:0,51,632	1/1:0,14:14:42.10:548,42,0	1/1:0,26:26:75.25:1006,75,0	1/1:1,20:21:48.16:651,48,0	0/0:18,0:18:51.16:0,51,632	0/0:14,0:14:42.13:0,42,521	0/0:24,0:24:69.22:0,69,854	0/0:23,0:23:66.21:0,66,818	1/1:2,31:33:56.90:1196,57,0	1/1:1,24:25:66.22:898,66,0	1/1:0,8:8:24.08:322,24,0
chr10	39378725	.	CATTTT	C	1732.74	PASS	AC=28;AF=0.636;AN=44;BaseQRankSum=4.639;DP=382;FS=23.308;HRun=0;HaplotypeScore=74.7415;InbreedingCoeff=0.6637;MQ=76.79;MQ0=6;MQRankSum=2.671;QD=9.96;ReadPosRankSum=0.658;VQSLOD=0.0596;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,0:17:6.02:70,6,0	./.	./.	./.	1/1:10,3:13:9.03:160,9,0	1/1:7,5:12:12.04:213,12,0	./.	0/0:45,0:43:21.07:0,21,424	1/1:8,4:12:9.03:160,9,0	1/1:15,0:17:3.01:35,3,0	1/1:7,0:11:9.03:105,9,0	./.	1/1:6,1:7:3.01:53,3,0	1/1:4,2:6:3.01:53,3,0	1/1:6,3:9:9.03:160,9,0	1/1:8,0:8:3.01:53,3,0	1/1:18,13:31:30.10:533,30,0	1/1:16,0:21:12.04:140,12,0	0/0:8,0:12:18.06:0,18,406	0/0:8,0:8:6.02:0,6,109	0/0:12,0:12:6.02:0,6,147	1/1:3,1:4:3.01:53,3,0	./.	1/1:4,2:6:6.02:107,6,0	0/0:5,0:5:12.04:0,12,333	0/0:14,0:14:9.02:0,9,187	0/0:6,0:8:3.01:0,3,65	0/0:20,0:23:27.09:0,27,591
chr10	39378926	.	C	CTG	2759.89	PASS	AB=0.696;AC=41;AF=0.820;AN=50;BaseQRankSum=-1.195;DP=515;FS=9.240;HRun=0;HaplotypeScore=88.7246;InbreedingCoeff=-0.2430;MQ=64.29;MQ0=15;MQRankSum=0.081;QD=6.27;ReadPosRankSum=-0.523;VQSLOD=1.8577;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:28:5.99:50,6,0	0/1:2,2:4:27.13:39,0,27	./.	./.	0/1:8,5:13:21.12:123,0,21	1/1:8,0:16:12:105,12,0	1/1:9,1:18:21:183,21,0	1/1:40,0:39:15.03:161,15,0	0/1:6,5:12:27.16:39,0,27	1/1:19,0:18:9.88:78,10,0	./.	1/1:3,13:17:15.04:208,15,0	0/1:8,11:19:15.11:208,0,15	0/1:7,6:13:36.15:36,0,57	1/1:10,13:23:3.22:295,3,0	0/1:10,12:26:17.22:294,0,17	1/1:10,10:20:18.06:271,18,0	1/1:20,0:20:3.69:119,4,0	1/1:10,0:10:9:92,9,0	1/1:13,0:12:2.90:25,3,0	1/1:18,0:24:0.30:1,0,0	1/1:10,0:10:9:95,9,0	0/1:10,1:10:75.31:75,0,84	0/1:13,11:25:27.82:76,0,28	0/1:6,7:13:42.50:121,0,42	1/1:8,0:9:8.93:73,9,0	1/1:18,0:18:9.30:64,9,0	1/1:14,0:14:8.94:65,9,0
chr10	39379172	.	A	AG	12581.27	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=6.029;DP=677;FS=0.287;HRun=0;HaplotypeScore=73.0733;InbreedingCoeff=0.9846;MQ=90.70;MQ0=0;MQRankSum=-3.753;QD=44.61;ReadPosRankSum=0.066;VQSLOD=5.0083;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,36:37:96.33:1534,96,0	0/0:11,0:11:33.11:0,33,461	0/0:25,0:25:72.17:0,72,922	0/0:35,0:34:87.21:0,87,1122	0/0:27,0:27:81.25:0,81,1113	0/0:25,0:25:72.24:0,72,1006	0/0:20,0:20:57.18:0,57,780	1/1:4,29:33:93.30:1460,93,0	0/0:23,0:23:63.15:0,63,826	1/1:0,26:26:78.27:1242,78,0	1/1:0,21:21:57.11:878,57,0	0/0:22,0:22:66.21:0,66,907	0/0:25,0:25:72.22:0,72,987	0/0:22,0:22:66.21:0,66,901	0/0:31,0:31:90.29:0,90,1243	0/0:37,0:37:99:0,105,1451	0/0:18,0:18:51.17:0,51,713	1/1:1,13:14:36.12:575,36,0	1/1:2,17:19:57.19:898,57,0	1/1:1,25:26:75.19:1157,75,0	1/1:0,43:43:99:2014,126,0	0/0:22,0:22:66.19:0,66,886	0/0:8,0:8:24.08:0,24,336	0/0:31,0:31:90.30:0,90,1257	0/0:13,0:13:39.13:0,39,545	1/1:1,28:29:84.27:1310,84,0	1/1:1,31:31:90.31:1426,90,0	1/1:0,1:2:6.02:87,6,0
chr10	39379657	.	T	TGAAA	8325.80	PASS	AB=1.000;AC=49;AF=0.875;AN=56;BaseQRankSum=-1.857;DP=588;FS=9.246;HRun=0;HaplotypeScore=107.5699;InbreedingCoeff=0.4263;MQ=67.34;MQ0=11;MQRankSum=-4.516;QD=15.48;ReadPosRankSum=-0.482;VQSLOD=3.9635;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,33:42:6.86:98,7,0	0/1:11,0:11:69.36:70,0,69	0/0:24,0:15:34.40:0,34,351	0/0:26,0:13:32.84:0,33,317	1/1:14,0:14:29.65:269,30,0	1/1:2,2:18:6.02:152,6,0	1/1:27,0:27:68.66:635,69,0	1/1:27,0:27:70.28:643,70,0	1/1:3,17:21:11.91:223,12,0	1/1:22,0:22:9.31:389,9,0	1/1:18,0:18:24.61:322,25,0	1/1:18,0:18:33.98:366,34,0	1/1:18,0:17:38.58:329,39,0	1/1:22,0:22:44.79:409,45,0	1/1:2,26:31:15.05:409,15,0	1/1:1,3:24:6.02:144,6,0	1/1:6,16:22:8.99:129,9,0	0/1:23,0:23:26.46:348,0,26	1/1:17,0:17:46.26:435,46,0	1/1:14,0:14:35.93:303,36,0	1/1:21,0:21:38.16:313,38,0	1/1:2,20:23:47.54:435,48,0	1/1:14,0:14:24.83:239,25,0	1/1:20,0:20:24.81:249,25,0	0/1:16,0:16:28.53:29,0,196	1/1:17,0:17:39.50:439,40,0	1/1:26,0:26:70.99:703,71,0	1/1:10,0:10:29.92:245,30,0
chr10	39379658	.	G	GAA	7286.65	PASS	AB=1.000;AC=49;AF=0.875;AN=56;BaseQRankSum=0.935;DP=611;FS=14.205;HRun=1;HaplotypeScore=106.5913;InbreedingCoeff=0.6985;MQ=65.98;MQ0=11;MQRankSum=-4.332;QD=13.42;ReadPosRankSum=1.486;VQSLOD=0.6611;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:43,0:42:6.45:54,6,0	0/1:11,0:11:11.70:84,0,12	0/0:24,0:15:34.55:0,35,352	0/0:26,0:13:32.84:0,33,317	1/1:4,11:16:27.26:220,27,0	1/1:16,0:16:6.02:75,6,0	1/1:28,0:28:55.89:488,56,0	1/1:34,0:34:75.35:694,75,0	1/1:21,0:21:11.99:125,12,0	1/1:22,0:22:51.01:459,51,0	1/1:19,0:19:39.82:350,40,0	1/1:19,0:19:51.64:414,52,0	1/1:19,0:18:25.51:244,26,0	1/1:22,0:22:40.29:290,40,0	1/1:31,0:31:15.05:189,15,0	1/1:21,0:21:6.02:82,6,0	1/1:23,1:24:9.48:153,9,0	1/1:24,0:24:25.06:380,25,0	1/1:23,0:22:36.35:365,36,0	1/1:16,0:16:35.93:303,36,0	1/1:21,0:21:38.16:313,38,0	1/1:23,0:23:47.53:347,48,0	1/1:15,0:15:35.12:267,35,0	1/1:20,0:20:51.05:349,51,0	0/0:18,0:18:5.19:0,5,201	1/1:18,0:18:34.12:283,34,0	1/1:26,0:26:66.53:514,67,0	1/1:10,0:10:29.92:245,30,0
chr10	39381558	.	A	ACGCGCGCG	4441.32	PASS	AB=0.940;AC=21;AF=0.389;AN=54;BaseQRankSum=-0.666;DP=548;FS=0.475;HRun=0;HaplotypeScore=170.9200;InbreedingCoeff=0.0160;MQ=69.39;MQ0=3;MQRankSum=-9.777;QD=15.00;ReadPosRankSum=-1.660;VQSLOD=3.8402;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:45:53.33:0,53,394	0/0:2,0:13:20.39:0,20,155	0/0:38,0:26:72.22:0,72,1761	0/0:25,0:21:49.27:0,49,1134	0/0:14,0:14:15.05:0,15,405	0/0:12,0:12:12.03:0,12,237	0/1:16,0:15:32.53:33,0,368	1/1:24,8:29:60.15:1161,60,0	0/1:17,0:17:63.01:63,0,546	0/0:4,0:28:33.22:0,33,604	0/0:1,0:15:8.76:0,9,76	0/1:15,0:15:99:129,0,136	0/1:8,0:8:61.32:189,0,61	0/1:14,0:14:6.71:7,0,647	0/1:16,0:16:65.10:65,0,604	0/1:23,0:23:99:135,0,392	0/1:24,0:24:50.54:51,0,834	0/0:3,0:27:34.64:0,35,225	1/1:5,13:18:35.90:1035,36,0	./.	0/1:9,9:20:0.01:0,0,1	0/1:11,0:11:17.41:17,0,364	0/1:16,0:16:23.74:24,0,328	0/1:22,0:22:20.64:21,0,317	0/0:20,0:20:54.17:0,54,1446	0/1:6,15:22:5.89:1093,0,6	1/1:7,9:19:12.19:351,12,0	1/1:2,0:2:3.01:69,3,0
chr10	39381561	.	C	CGTGTGTGTGT	9580.76	PASS	AB=0.958;AC=38;AF=0.679;AN=56;BaseQRankSum=-2.595;DP=650;FS=2.638;HRun=0;HaplotypeScore=235.7926;InbreedingCoeff=0.4549;MQ=63.09;MQ0=4;MQRankSum=-9.204;QD=20.17;ReadPosRankSum=-0.256;VQSLOD=3.9731;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:48:55.93:0,56,826	0/0:11,0:12:12.61:0,13,235	0/0:38,0:25:19.87:0,20,422	0/1:25,0:21:11.35:11,0,236	0/0:19,0:20:3.13:0,3,7	1/1:18,0:18:8.16:74,8,0	1/1:15,2:20:2.17:89,2,0	1/1:38,0:33:40.01:1336,40,0	1/1:15,5:22:15.05:648,15,0	0/1:29,0:29:59.62:60,0,358	0/0:14,0:15:9.92:0,10,162	1/1:13,7:25:14.89:688,15,0	1/1:7,3:13:27.08:1171,27,0	1/1:19,2:23:12.04:473,12,0	1/1:18,0:24:6.42:387,6,0	1/1:18,1:27:17.94:782,18,0	1/1:23,0:32:27.09:1022,27,0	0/1:27,0:27:12.59:13,0,557	1/1:21,0:20:27.63:665,28,0	0/0:18,0:17:1.77:0,2,5	1/1:18,0:18:2.08:48,2,0	1/1:13,1:15:1.76:147,2,0	0/1:16,4:20:30.63:262,0,31	1/1:17,7:29:6.02:221,6,0	0/0:23,0:23:44.96:0,45,999	1/1:25,0:25:33.99:919,34,0	1/1:21,0:21:15.56:471,16,0	1/1:3,0:3:3.01:95,3,0
chr10	39382082	.	ATTTTT	A	4198.53	PASS	AB=0.605;AC=24;AF=0.429;AN=56;BaseQRankSum=-0.818;DP=471;FS=6.941;HRun=18;HaplotypeScore=104.5913;InbreedingCoeff=0.6577;MQ=65.52;MQ0=0;MQRankSum=-3.928;QD=15.67;ReadPosRankSum=3.847;VQSLOD=-0.2970;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:10,14:23:10.53:362,0,11	1/1:3,7:10:11.70:169,12,0	0/0:20,0:10:23.94:0,24,275	0/0:8,0:5:6.89:0,7,90	0/0:10,0:26:64.91:0,65,470	0/0:6,0:18:19.09:0,19,138	0/0:2,0:10:16.07:0,16,68	1/1:16,7:24:21.96:303,22,0	0/0:6,0:8:8.35:0,8,46	1/1:10,15:26:44.57:608,45,0	1/1:9,14:23:9.58:249,10,0	0/0:7,0:11:20.12:0,20,220	0/0:8,0:12:10.57:0,11,204	0/0:2,0:6:5.67:0,6,34	0/0:5,0:13:22.06:0,22,117	0/1:5,0:20:13.16:13,0,133	0/1:4,0:17:5.70:6,0,58	1/1:5,11:17:20.64:290,21,0	1/1:4,7:11:11.49:174,11,0	1/1:4,9:15:20.83:329,21,0	0/1:9,10:19:8.55:198,0,9	0/0:5,0:16:17.23:0,17,106	0/0:8,0:21:19.16:0,19,194	0/0:5,0:13:4.87:0,5,57	0/0:16,0:17:36.12:0,36,657	1/1:5,10:16:21.50:290,22,0	1/1:4,22:26:47.90:682,48,0	1/1:4,11:18:40.92:525,41,0
chr10	39382635	.	C	CTT	4434.89	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=0.768;DP=473;FS=11.490;HRun=15;HaplotypeScore=99.6530;InbreedingCoeff=0.8440;MQ=64.49;MQ0=9;MQRankSum=-6.959;QD=13.36;ReadPosRankSum=-5.004;VQSLOD=1.3412;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:40:48.58:0,49,219	0/0:2,0:10:13.02:0,13,73	0/0:11,0:8:5.46:0,5,42	0/0:14,0:11:7.92:0,8,54	1/1:5,11:16:30.04:348,30,0	1/1:13,6:19:31.56:320,32,0	1/1:14,6:19:8.62:217,9,0	1/1:18,9:27:34.94:313,35,0	1/1:12,7:21:35.90:355,36,0	0/0:6,0:15:21.66:0,22,102	0/0:2,0:5:2.68:0,3,12	1/1:8,4:14:16.12:127,16,0	1/1:9,4:15:29.56:294,30,0	1/1:12,1:18:14.92:126,15,0	1/1:15,6:22:9.19:281,9,0	1/1:9,4:16:20.57:162,21,0	1/1:11,9:24:41.40:377,41,0	0/0:10,0:26:30.73:0,31,140	1/1:7,4:13:16.78:159,17,0	1/1:4,1:5:5.97:57,6,0	1/1:1,2:6:8.64:57,9,0	1/1:6,0:4:3.01:35,3,0	1/1:11,6:17:23.99:260,24,0	1/1:7,6:12:15.52:191,16,0	0/0:11,0:12:14.84:0,15,134	1/1:11,6:20:26.96:289,27,0	1/1:12,5:18:25.55:242,26,0	1/1:2,6:11:27.45:225,27,0
chr10	39385152	.	TCAA	T	1897.62	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=9.701;DP=484;FS=82.085;HRun=0;HaplotypeScore=78.5544;InbreedingCoeff=0.8877;MQ=62.01;MQ0=6;MQRankSum=-9.221;QD=39.53;ReadPosRankSum=-0.178;VQSLOD=0.6724;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:42.14:0,42,996	0/0:7,0:7:21.07:0,21,502	0/0:16,0:10:4.06:0,4,463	0/0:20,0:13:2.05:0,2,482	0/0:37,0:35:99:0,102,2422	0/0:26,0:25:75.24:0,75,1745	0/0:19,0:18:54.18:0,54,1260	1/1:0,4:4:12.04:223,12,0	0/0:16,0:16:48.16:0,48,1149	0/0:31,0:31:93.32:0,93,2230	0/0:35,0:35:96.33:0,96,2271	0/0:9,0:9:27.09:0,27,613	0/0:18,0:18:54.19:0,54,1290	0/0:22,0:21:63.17:0,63,1453	0/0:30,0:30:90.31:0,90,2062	0/0:21,0:21:63.22:0,63,1499	0/0:15,0:15:45.15:0,45,1073	0/0:19,0:19:54.18:0,54,1259	1/1:2,4:6:15.05:283,15,0	1/1:1,9:6:18.02:298,18,0	1/1:0,1:1:3.01:56,3,0	0/0:24,0:23:69.24:0,69,1614	0/0:22,0:21:60.21:0,60,1427	0/0:13,0:13:36.12:0,36,860	0/0:19,0:19:57.20:0,57,1330	1/1:1,6:6:18.06:334,18,0	1/1:1,4:4:12.04:222,12,0	1/1:0,14:12:36.12:668,36,0
chr10	39385158	.	TAAA	T	1575.71	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=10.139;DP=470;FS=41.739;HRun=5;HaplotypeScore=84.8926;InbreedingCoeff=0.9460;MQ=65.12;MQ0=0;MQRankSum=-8.760;QD=32.83;ReadPosRankSum=-0.140;VQSLOD=-0.2950;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:48.14:0,48,1054	0/0:7,0:7:21.07:0,21,484	0/0:16,0:13:31.73:0,32,705	0/0:18,0:14:30.10:0,30,671	0/0:33,0:33:93.31:0,93,2056	0/0:25,0:25:72.20:0,72,1605	0/0:16,0:16:45.15:0,45,1037	1/1:1,3:4:9.02:150,9,0	0/0:16,0:16:48.12:0,48,1056	0/0:32,0:32:93.29:0,93,2017	0/0:34,0:34:90.30:0,90,1994	0/0:11,0:11:33.11:0,33,755	0/0:20,0:20:60.21:0,60,1367	0/0:22,0:22:60.21:0,60,1369	0/0:26,0:26:78.22:0,78,1747	0/0:22,0:22:57.20:0,57,1308	0/0:15,0:15:42.14:0,42,968	0/0:19,0:19:54.17:0,54,1200	1/1:2,4:6:18.06:293,18,0	1/1:2,8:6:15.03:241,15,0	1/1:0,1:1:3.01:50,3,0	0/0:20,0:20:57.16:0,57,1265	0/0:22,0:22:66.16:0,66,1424	0/0:13,0:13:33.11:0,33,761	0/0:17,0:17:51.17:0,51,1133	1/1:3,4:7:14.89:214,15,0	1/1:2,4:6:16.91:216,17,0	1/1:0,14:12:36.12:598,36,0
chr10	39385239	.	A	AT	19526.83	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-4.487;DP=567;FS=2.517;HRun=3;HaplotypeScore=57.2218;InbreedingCoeff=0.9707;MQ=59.80;MQ0=7;MQRankSum=-4.614;QD=35.96;ReadPosRankSum=3.891;VQSLOD=5.4355;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,23:24:63.13:838,63,0	1/1:1,12:13:33.11:461,33,0	0/0:15,0:11:11.20:0,11,223	0/0:9,0:7:15.43:0,15,150	1/1:1,29:30:81.09:1062,81,0	1/1:0,28:28:81.19:1107,81,0	1/1:0,14:14:39.13:545,39,0	1/1:6,32:32:90.27:1238,90,0	1/1:0,13:13:36.12:503,36,0	1/1:1,20:21:60.17:805,60,0	1/1:0,40:40:78.15:1043,78,0	1/1:0,19:19:54.18:755,54,0	1/1:3,17:20:48.16:657,48,0	1/1:1,20:21:57.15:775,57,0	1/1:1,21:22:60.20:839,60,0	1/1:1,21:22:60.20:839,60,0	1/1:0,13:13:39.13:545,39,0	1/1:3,10:13:24.08:336,24,0	1/1:2,21:22:63.19:861,63,0	1/1:0,21:20:57.19:797,57,0	1/1:0,10:10:30.10:419,30,0	1/1:1,13:14:39.13:545,39,0	1/1:1,17:18:48.16:671,48,0	1/1:0,12:12:27.09:377,27,0	1/1:1,13:14:39.13:545,39,0	1/1:0,29:29:87.28:1201,87,0	1/1:0,32:32:87.16:1215,87,0	1/1:3,16:17:39.13:545,39,0
chr10	39389854	.	GC	G	2830.72	PASS	AB=0.667;AC=15;AF=0.268;AN=56;BaseQRankSum=14.252;DP=432;FS=7.362;HRun=1;HaplotypeScore=70.8323;InbreedingCoeff=0.8479;MQ=54.30;MQ0=10;MQRankSum=-5.522;QD=25.05;ReadPosRankSum=0.203;VQSLOD=2.9818;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,114,1822	0/0:8,0:8:24.07:0,24,361	1/1:3,0:1:3.01:30,3,0	0/0:1,0:1:3.01:0,3,39	0/0:11,0:11:30.10:0,30,480	0/0:18,0:18:54.18:0,54,863	0/0:18,0:17:42.13:0,42,647	1/1:1,14:14:39.12:455,39,0	0/0:9,0:9:24.06:0,24,357	0/0:16,0:16:45.15:0,45,720	0/0:9,0:9:24.08:0,24,382	0/0:13,0:13:39.13:0,39,624	0/0:13,0:13:39.10:0,39,577	0/0:10,0:10:27.09:0,27,430	0/0:14,0:13:39.13:0,39,621	0/0:11,0:11:33.11:0,33,528	0/0:22,0:21:60.20:0,60,959	0/0:33,0:31:87.16:0,87,1353	1/1:2,10:11:30.09:347,30,0	1/1:2,15:17:42.12:489,42,0	1/1:2,20:21:44.94:481,45,0	0/0:11,0:11:30.10:0,30,480	0/0:12,0:9:27.09:0,27,432	0/0:26,0:26:76.11:0,76,1175	0/0:25,0:25:75.26:0,75,1192	0/1:7,7:11:18.07:239,0,18	1/1:1,19:20:57.16:650,57,0	1/1:0,10:10:30.07:334,30,0
chr10	39390253	.	AAG	A	1382.95	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.023;DP=618;FS=0.651;HRun=0;HaplotypeScore=74.1654;InbreedingCoeff=0.9916;MQ=87.83;MQ0=0;MQRankSum=-0.869;QD=32.16;ReadPosRankSum=1.873;VQSLOD=5.4618;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:87.30:0,87,1546	0/0:6,0:6:15.05:0,15,275	0/0:29,0:29:73.68:0,74,1324	0/0:16,0:16:39.13:0,39,690	0/0:22,0:22:66.23:0,66,1200	1/1:0,23:23:57.19:817,57,0	1/1:0,20:20:48.16:688,48,0	0/0:32,0:32:90.31:0,90,1632	0/0:24,0:24:72.25:0,72,1306	0/0:24,0:24:69.23:0,69,1217	0/0:20,0:20:57.18:0,57,1009	0/0:25,0:25:69.22:0,69,1229	0/0:18,0:18:54.19:0,54,985	0/0:39,0:39:99:0,117,2129	0/0:26,0:26:69.24:0,69,1260	0/0:21,0:21:60.17:0,60,1038	0/0:16,0:16:48.16:0,48,866	0/0:17,0:17:51.17:0,51,920	0/0:11,0:11:33.11:0,33,605	0/0:21,0:21:60.19:0,60,1042	0/0:23,0:23:66.23:0,66,1210	0/0:16,0:16:48.16:0,48,872	0/0:16,0:16:42.14:0,42,744	0/0:27,0:27:78.25:0,78,1386	0/0:24,0:24:69.24:0,69,1252	0/0:30,0:30:87.30:0,87,1583	0/0:31,0:31:90.29:0,90,1619	0/0:11,0:11:33.11:0,33,568
chr10	39391610	.	CGT	C	10607.80	PASS	AB=0.921;AC=26;AF=0.464;AN=56;BaseQRankSum=16.874;DP=941;FS=0.281;HRun=0;HaplotypeScore=121.5258;InbreedingCoeff=0.8232;MQ=71.03;MQ0=5;MQRankSum=0.194;QD=22.24;ReadPosRankSum=0.053;VQSLOD=5.3502;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:14,55:68:99:1659,135,0	1/1:3,7:10:21.07:258,21,0	0/0:31,0:24:1.95:0,2,319	0/0:30,0:23:6.76:0,7,209	0/0:30,0:30:78.25:0,78,1247	0/0:12,0:13:30.09:0,30,467	0/0:29,2:31:7.40:0,7,1114	1/1:17,17:35:53.94:611,54,0	0/1:25,2:27:4.58:5,0,953	1/1:8,40:48:99:1386,114,0	1/1:7,18:25:51.16:628,51,0	0/0:31,0:31:84.29:0,84,1362	0/0:34,0:34:87.30:0,87,1415	0/0:35,1:36:53.37:0,53,1329	0/0:29,0:29:78.22:0,78,1216	0/0:50,1:51:95.50:0,96,2025	0/0:35,0:35:87.26:0,87,1357	1/1:5,37:42:99:1306,108,0	1/1:8,10:18:35.93:407,36,0	1/1:3,27:30:72.23:886,72,0	1/1:10,44:54:99:1357,114,0	0/0:37,1:38:56.37:0,56,1401	0/1:28,3:31:32.50:32,0,1015	0/0:42,0:42:90.31:0,90,1464	0/0:32,0:32:72.23:0,72,1140	1/1:9,26:36:74.90:877,75,0	1/1:6,21:28:55.41:665,55,0	1/1:0,19:20:44.97:531,45,0
chr10	39392340	.	TCCTC	T	2859.46	PASS	AB=0.764;AC=14;AF=0.250;AN=56;BaseQRankSum=10.331;DP=647;FS=5.928;HRun=0;HaplotypeScore=109.7988;InbreedingCoeff=0.8067;MQ=68.85;MQ0=7;MQRankSum=4.350;QD=15.63;ReadPosRankSum=-3.099;VQSLOD=2.4696;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:25:53.02:0,53,461	0/0:11,0:11:27.46:0,27,266	0/0:29,0:19:35.20:0,35,374	0/0:20,0:11:23.65:0,24,228	0/0:23,0:23:60.04:0,60,906	0/0:36,0:36:81.78:0,82,1205	0/0:26,0:25:65.99:0,66,847	1/1:4,13:17:36.23:322,36,0	0/1:25,0:25:19.72:20,0,347	0/0:21,0:21:51.02:0,51,493	0/0:24,0:24:57.76:0,58,529	0/0:23,0:23:60.03:0,60,1076	0/0:16,0:16:35.43:0,35,300	0/0:28,0:28:53.27:0,53,593	0/0:24,0:22:65.99:0,66,858	0/0:18,0:18:48.05:0,48,748	0/0:20,0:20:60.04:0,60,1019	0/0:20,0:20:41.90:0,42,410	1/1:4,21:25:59.91:551,60,0	1/1:1,21:22:47.58:451,48,0	0/1:3,26:29:20.64:353,0,21	0/0:25,0:25:43.90:0,44,1040	0/0:16,0:16:47.77:0,48,650	0/0:35,0:35:70.89:0,71,1513	0/0:23,0:23:53.88:0,54,582	1/1:2,20:22:60.03:749,60,0	1/1:3,23:25:20.94:337,21,0	1/1:0,17:17:15.05:269,15,0
chr10	39392348	.	C	CCCTTCCTT	1373.82	PASS	AB=0.929;AC=17;AF=0.340;AN=50;BaseQRankSum=0.004;DP=641;FS=9.135;HRun=0;HaplotypeScore=164.6586;InbreedingCoeff=0.5806;MQ=63.60;MQ0=9;MQRankSum=-3.009;QD=6.13;ReadPosRankSum=-3.189;VQSLOD=1.1512;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:24:14.94:209,15,0	1/1:8,5:14:6.38:139,6,0	./.	./.	0/0:23,0:23:26.20:0,26,540	0/0:30,0:30:35.63:0,36,628	0/0:27,0:26:1.04:0,1,265	./.	0/0:15,0:22:11.40:0,11,175	1/1:16,4:20:3.01:122,3,0	1/1:14,11:25:24.07:419,24,0	0/0:22,0:22:36.01:0,36,701	1/1:11,7:21:3.01:93,3,0	1/1:21,3:27:9.03:338,9,0	0/0:26,0:24:26.55:0,27,423	0/0:19,0:18:20.25:0,20,466	0/1:23,0:23:8.91:9,0,535	1/1:12,5:22:6:146,6,0	0/0:23,0:23:9.02:0,9,140	0/0:22,0:22:12.02:0,12,199	0/0:30,0:30:26.41:0,26,389	0/0:21,0:22:36.12:0,36,792	0/0:18,0:18:21.06:0,21,422	0/0:31,0:32:48.05:0,48,871	0/1:16,0:22:21.99:62,0,22	0/0:23,0:23:30.16:0,30,483	0/1:25,0:24:5.87:6,0,208	0/0:19,0:19:18.05:0,18,319
chr10	39392687	.	TCTTA	T	8839.92	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=16.239;DP=769;FS=6.224;HRun=0;HaplotypeScore=128.7866;InbreedingCoeff=0.9984;MQ=84.70;MQ0=0;MQRankSum=-8.324;QD=47.53;ReadPosRankSum=-0.790;VQSLOD=5.4691;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,144,3900	0/0:10,0:10:30.10:0,30,790	0/0:28,0:28:72.08:0,72,1844	0/0:21,0:22:63.15:0,63,1546	0/0:16,0:16:48.16:0,48,1315	0/0:29,0:29:76.37:0,76,2032	0/0:22,0:22:63.22:0,63,1688	1/1:5,33:38:99:1932,102,0	0/0:19,0:19:57.20:0,57,1528	0/0:20,0:20:60.21:0,60,1617	0/0:14,0:14:39.13:0,39,1067	0/0:29,0:29:87.30:0,87,2376	0/0:49,0:49:99:0,147,3867	0/0:26,0:26:75.26:0,75,2055	0/0:47,0:47:99:0,141,3777	0/0:40,0:40:99:0,120,3231	0/0:35,0:35:99:0,105,2760	0/0:16,0:16:45.93:0,46,1138	1/1:1,24:25:69.22:1293,69,0	1/1:1,24:25:57.20:1091,57,0	1/1:0,35:35:67.83:1268,68,0	0/0:21,0:21:60.20:0,60,1556	0/0:22,0:22:66.23:0,66,1741	0/0:42,0:42:99:0,126,3420	0/0:25,0:24:72.25:0,72,1968	1/1:2,28:30:84.29:1628,84,0	1/1:1,25:26:65.96:1279,66,0	1/1:0,7:7:18.06:349,18,0
chr10	39393991	.	T	TGGCTG	47053.64	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=4.057;DP=647;FS=8.078;HRun=0;HaplotypeScore=159.5893;InbreedingCoeff=0.9990;MQ=87.79;MQ0=0;MQRankSum=-14.070;QD=84.02;ReadPosRankSum=4.704;VQSLOD=6.2622;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,12:28:48.16:1551,48,0	1/1:0,8:8:24.08:795,24,0	0/0:34,0:34:99:0,99,2179	0/0:32,0:32:87.26:0,87,1870	1/1:8,17:28:69.22:2005,69,0	1/1:5,14:21:54.19:1720,54,0	1/1:5,22:27:72.23:2293,72,0	1/1:6,19:25:75.24:2322,75,0	1/1:3,12:15:45.15:1446,45,0	1/1:3,13:17:48.15:1519,48,0	1/1:6,13:22:57.18:1796,57,0	1/1:8,24:32:96.29:2906,96,0	1/1:9,22:31:93.28:2776,93,0	1/1:7,25:33:93.32:2960,93,0	1/1:5,24:30:90.31:2908,90,0	1/1:7,15:22:63.19:1863,63,0	1/1:5,10:15:42.08:1216,42,0	1/1:8,10:18:42.13:1313,42,0	1/1:3,11:15:42.14:1350,42,0	1/1:4,19:23:60.21:1971,60,0	1/1:8,7:16:30.09:854,30,0	1/1:2,18:21:60.21:1871,60,0	1/1:5,13:21:60.19:1793,60,0	1/1:5,16:21:41.99:1258,42,0	0/0:21,0:21:63.22:0,63,1448	1/1:10,22:33:93.28:2838,93,0	1/1:3,21:24:72.25:2333,72,0	1/1:0,14:14:42.14:1396,42,0
chr10	39393992	.	C	CTGG	9924.10	PASS	AB=1.000;AC=49;AF=0.875;AN=56;BaseQRankSum=13.792;DP=641;FS=6.520;HRun=0;HaplotypeScore=268.2141;InbreedingCoeff=0.8235;MQ=86.73;MQ0=0;MQRankSum=-13.374;QD=17.82;ReadPosRankSum=6.801;VQSLOD=3.0467;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:26,2:28:27.47:422,27,0	1/1:8,0:8:23.65:154,24,0	0/0:34,0:34:99:0,99,1796	0/0:29,0:29:78.26:0,78,1410	1/1:29,0:29:31.46:408,31,0	1/1:20,1:21:53.43:421,53,0	1/1:27,0:27:47.13:424,47,0	1/1:25,0:25:67.68:455,68,0	1/1:16,0:16:44.34:323,44,0	1/1:16,1:17:46.71:350,47,0	1/1:21,1:22:53.61:412,54,0	1/1:30,0:30:85.58:620,86,0	1/1:28,0:28:81.74:560,82,0	1/1:33,0:33:90.05:613,90,0	1/1:31,0:31:89.08:654,89,0	1/1:20,0:20:56.09:414,56,0	1/1:14,0:14:33.91:256,34,0	1/1:18,0:18:16.87:227,17,0	1/1:14,1:15:17.58:313,18,0	1/1:24,0:24:42.53:425,43,0	1/1:15,1:16:12.92:180,13,0	1/1:21,0:21:40.79:332,41,0	1/1:21,0:21:55.93:428,56,0	0/1:21,0:21:39.61:165,0,40	0/0:21,0:21:63.19:0,63,1142	1/1:34,0:34:65.49:632,65,0	1/1:24,0:24:70.50:470,70,0	1/1:14,0:14:41.40:267,41,0
chr10	39394012	.	G	GC	20790.65	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=4.777;DP=641;FS=35.196;HRun=1;HaplotypeScore=171.6376;InbreedingCoeff=0.9940;MQ=85.35;MQ0=0;MQRankSum=-12.559;QD=37.19;ReadPosRankSum=2.114;VQSLOD=1.4800;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,31:31:66.09:911,66,0	1/1:1,5:6:15.05:223,15,0	0/0:30,0:30:83.30:0,83,1047	0/0:27,0:27:75.18:0,75,919	1/1:2,17:19:41.17:586,41,0	1/1:1,17:18:51.17:760,51,0	1/1:4,22:26:75.12:1038,75,0	1/1:4,23:27:72.02:1025,72,0	1/1:1,22:23:60.20:894,60,0	1/1:1,9:10:29.84:412,30,0	1/1:1,12:13:36.12:535,36,0	1/1:2,25:27:78.26:1150,78,0	1/1:1,24:25:69.02:994,69,0	1/1:2,30:32:84.28:1240,84,0	1/1:1,34:35:93.10:1355,93,0	1/1:3,23:26:69.23:1016,69,0	1/1:3,16:19:45.15:663,45,0	1/1:0,19:19:51.17:762,51,0	1/1:1,16:17:48.16:717,48,0	1/1:1,24:25:69.23:1027,69,0	1/1:3,23:26:42.01:553,42,0	1/1:3,18:21:51.17:760,51,0	1/1:4,16:20:38.86:580,39,0	1/1:2,26:28:57.15:827,57,0	0/0:25,0:25:72.23:0,72,935	1/1:1,24:25:69.23:1022,69,0	1/1:1,27:28:78.26:1164,78,0	1/1:1,12:13:39.13:579,39,0
chr10	39394709	.	AGAGAGAGAGGGAGAGAGAGGGACAGAGAAGGAGAGCGAGG	A	5329.97	PASS	AB=0.787;AC=14;AF=0.250;AN=56;BaseQRankSum=10.463;DP=727;FS=3.202;HRun=0;HaplotypeScore=631.3096;InbreedingCoeff=0.7956;MQ=70.70;MQ0=6;MQRankSum=-3.813;QD=29.13;ReadPosRankSum=-2.060;VQSLOD=0.0378;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,105,12852	0/0:9,0:9:18.06:0,18,2959	0/0:39,0:22:33.03:0,33,1099	0/1:56,0:31:0.74:1,0,390	0/0:20,0:19:45.15:0,45,4905	0/0:22,0:21:45.10:0,45,4388	0/0:28,0:28:69.24:0,69,7599	1/1:27,0:26:42.13:888,42,0	0/0:17,0:17:36.12:0,36,4114	0/0:31,0:31:75.26:0,75,8300	0/0:20,0:20:45.15:0,45,6138	0/0:33,0:33:81.26:0,81,9030	0/0:26,0:26:54.17:0,54,5714	0/0:29,0:29:63.22:0,63,7059	0/0:22,0:22:57.18:0,57,7081	0/0:26,0:26:54.18:0,54,6750	0/0:29,0:29:63.22:0,63,7641	0/0:23,0:23:54.19:0,54,6937	1/1:7,9:15:27.06:827,27,0	1/1:11,0:11:9.03:170,9,0	1/1:22,0:22:11.62:254,12,0	0/0:28,0:28:63.21:0,63,5916	0/0:22,0:22:48.15:0,48,4933	0/0:49,0:49:99:0,114,12448	0/0:17,0:17:46.96:0,47,6182	0/1:7,20:27:99:1685,0,262	1/1:4,10:14:9.03:904,9,0	1/1:1,8:9:6.02:600,6,0
chr10	39394727	.	AGG	A	1510.87	PASS	AB=0.966;AC=14;AF=0.250;AN=56;BaseQRankSum=10.941;DP=698;FS=10.940;HRun=3;HaplotypeScore=118.5684;InbreedingCoeff=0.7590;MQ=74.11;MQ0=11;MQRankSum=-4.831;QD=9.05;ReadPosRankSum=-0.747;VQSLOD=-0.5728;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,132,2411	0/0:9,0:9:27.08:0,27,480	0/0:54,0:32:49.27:0,49,871	0/1:75,0:35:16.17:16,0,406	0/0:19,0:18:54.17:0,54,1001	0/0:26,0:25:71.89:0,72,1076	0/0:28,0:28:81.27:0,81,1519	1/1:0,14:14:42.13:580,42,0	0/0:17,0:17:50.98:0,51,845	0/0:27,0:27:78.25:0,78,1465	0/0:21,0:21:60.20:0,60,1117	0/0:34,0:34:96.27:0,96,1693	0/0:28,0:28:84.24:0,84,1482	0/0:25,0:25:72.23:0,72,1317	0/0:24,0:24:72.22:0,72,1285	0/0:22,0:22:63.22:0,63,1216	0/0:24,0:24:69.22:0,69,1280	0/0:18,0:18:54.19:0,54,1028	1/1:11,0:10:17.92:239,18,0	1/1:1,4:5:9.03:126,9,0	1/1:0,16:16:11.83:181,12,0	0/0:29,0:29:87.25:0,87,1488	0/0:17,0:17:48.15:0,48,883	0/0:45,0:45:99:0,135,2514	0/0:16,1:17:48.63:0,49,893	0/1:21,1:22:16.05:450,0,16	1/1:10,0:10:8.65:46,9,0	1/1:8,0:8:5.88:53,6,0
chr10	39394736	.	GA	G	494.86	PASS	AB=0.957;AC=13;AF=0.232;AN=56;BaseQRankSum=9.944;DP=713;FS=12.201;HRun=2;HaplotypeScore=117.3285;InbreedingCoeff=0.8190;MQ=76.64;MQ0=11;MQRankSum=-6.217;QD=6.34;ReadPosRankSum=-1.615;VQSLOD=-0.6403;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,135,1981	0/0:9,0:9:27.09:0,27,405	0/0:59,0:36:64.15:0,64,949	0/0:99,0:48:41.19:0,41,745	0/0:19,0:18:51.17:0,51,761	0/0:29,0:29:87.19:0,87,1223	0/0:27,0:27:78.25:0,78,1150	1/1:2,8:10:24.07:270,24,0	0/0:17,0:17:51.15:0,51,726	0/0:29,0:29:81.26:0,81,1171	0/0:24,0:24:72.20:0,72,1054	0/0:32,0:32:90.29:0,90,1324	0/0:29,0:29:87.28:0,87,1278	0/0:25,0:25:72.24:0,72,1079	0/0:26,0:26:78.26:0,78,1159	0/0:23,0:23:63.21:0,63,938	0/0:23,0:23:69.22:0,69,1013	0/0:18,0:18:54.17:0,54,787	1/1:10,0:9:10.23:65,10,0	1/1:4,2:6:6.37:35,6,0	1/1:3,9:12:11.72:71,12,0	0/0:26,0:26:78.26:0,78,1168	0/0:15,0:15:42.12:0,42,589	0/0:42,0:42:99:0,120,1752	0/0:17,0:17:48.16:0,48,702	0/1:21,1:22:17.55:168,0,18	1/1:10,0:10:6.66:21,7,0	1/1:8,0:8:5.23:37,5,0
chr10	39394749	.	G	GA	2195.13	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=11.295;DP=791;FS=2.093;HRun=0;HaplotypeScore=145.1827;InbreedingCoeff=0.9438;MQ=74.02;MQ0=14;MQRankSum=-4.425;QD=19.96;ReadPosRankSum=-4.556;VQSLOD=3.5542;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,126,1838	0/0:10,0:10:30.10:0,30,419	0/0:66,0:39:72.39:0,72,1008	0/0:111,0:56:59.82:0,60,1096	0/0:22,0:21:57.18:0,57,774	0/0:25,0:25:72.23:0,72,981	0/0:31,0:31:90.23:0,90,1209	1/1:10,8:18:44.91:488,45,0	0/0:19,0:19:54.17:0,54,731	0/0:28,0:28:81.23:0,81,1096	0/0:32,0:32:93.25:0,93,1216	0/0:29,0:29:87.29:0,87,1208	0/0:35,0:35:99:0,105,1431	0/0:25,0:25:75.23:0,75,1015	0/0:25,0:25:75.23:0,75,1016	0/0:27,0:27:78.25:0,78,1069	0/0:22,0:22:66.18:0,66,875	0/0:19,0:19:57.17:0,57,767	1/1:14,0:14:22.85:285,23,0	1/1:7,2:9:21.07:293,21,0	1/1:10,0:10:22.01:244,22,0	0/0:27,0:27:81.23:0,81,1067	0/0:16,0:16:45.15:0,45,624	0/0:35,0:35:99:0,102,1383	0/0:24,0:24:72.23:0,72,985	1/1:28,0:28:1.54:505,2,0	1/1:15,0:15:7.92:171,8,0	1/1:16,0:16:27.04:396,27,0
chr10	39395012	.	GA	G	3954.43	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=8.829;DP=590;FS=27.320;HRun=7;HaplotypeScore=63.2218;InbreedingCoeff=0.9888;MQ=80.66;MQ0=0;MQRankSum=-1.200;QD=23.68;ReadPosRankSum=0.541;VQSLOD=1.8805;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:78.22:0,78,946	0/0:10,0:10:27.05:0,27,324	0/0:16,0:16:40.34:0,40,465	0/0:20,0:19:25.28:0,25,392	0/0:28,0:28:75.22:0,75,915	0/0:25,0:25:69.15:0,69,846	0/0:19,0:19:51.15:0,51,631	1/1:4,29:33:87.13:855,87,0	0/0:20,0:20:54.16:0,54,669	0/0:25,0:25:66.18:0,66,798	0/0:13,0:13:35.93:0,36,408	0/0:18,0:18:48.12:0,48,588	0/0:22,0:22:63.18:0,63,768	0/0:16,0:16:42.11:0,42,503	0/0:35,0:35:99:0,99,1224	0/0:22,0:22:63.20:0,63,795	0/0:21,0:21:57.13:0,57,699	0/0:12,0:12:36.06:0,36,422	1/1:2,17:19:46.92:479,47,0	1/1:1,24:25:69.08:689,69,0	1/1:1,15:16:42.09:426,42,0	0/0:25,0:25:63.15:0,63,771	0/0:20,0:20:42.08:0,42,510	0/0:9,0:9:24.06:0,24,288	0/0:21,0:21:60.12:0,60,710	1/1:4,20:24:9.20:468,9,0	1/1:4,23:27:53.78:550,54,0	1/1:3,20:23:48.10:488,48,0
chr10	39396167	.	AAG	A	672.28	PASS	AB=0.815;AC=21;AF=0.420;AN=50;BaseQRankSum=1.004;DP=426;FS=11.591;HRun=0;HaplotypeScore=66.2930;InbreedingCoeff=0.6226;MQ=67.52;MQ0=4;MQRankSum=0.322;QD=4.51;ReadPosRankSum=2.081;VQSLOD=1.2503;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:28:8.97:0,9,72	0/0:10,0:10:8.99:0,9,86	./.	./.	0/1:17,5:22:32.65:55,0,33	1/1:10,0:10:0.47:1,0,0	1/1:7,0:11:8.05:36,8,0	0/0:32,0:30:12.89:0,13,126	1/1:8,2:10:6.02:65,6,0	0/0:16,0:16:15.01:0,15,139	0/0:19,0:18:6:0,6,60	1/1:11,3:14:5.97:64,6,0	1/1:7,0:11:8.52:42,9,0	1/1:5,0:9:8.52:42,9,0	1/1:3,8:11:9.02:97,9,0	0/0:17,0:16:24.06:0,24,312	1/1:14,9:23:27.07:291,27,0	0/0:8,0:13:3:0,3,26	0/0:4,0:4:3:0,3,26	0/0:9,0:9:5.98:0,6,47	0/0:15,0:15:8.49:0,8,60	1/1:9,3:13:11.23:87,11,0	./.	1/1:12,2:14:6.01:65,6,0	0/0:12,0:11:6:0,6,52	0/0:22,0:21:20.56:0,21,174	0/0:16,0:21:11.89:0,12,106	0/0:6,0:6:2.99:0,3,23
chr10	39396393	.	GAAAA	G	4789.13	PASS	AB=0.549;AC=44;AF=0.786;AN=56;BaseQRankSum=-0.951;DP=410;FS=2.870;HRun=16;HaplotypeScore=104.6359;InbreedingCoeff=0.5673;MQ=83.16;MQ0=1;MQRankSum=-0.623;QD=14.30;ReadPosRankSum=7.227;VQSLOD=1.8536;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,18:18:33.04:434,33,0	1/1:0,8:8:14.97:197,15,0	0/0:20,0:14:19.53:0,20,193	0/0:25,0:18:16.28:0,16,179	0/1:3,0:16:4.73:90,0,5	0/1:3,0:16:7.75:92,0,8	1/1:1,1:11:13.80:151,14,0	1/1:3,5:8:14.92:179,15,0	1/1:2,3:13:12.65:192,13,0	1/1:4,14:22:47.45:582,47,0	1/1:9,10:20:21.90:279,22,0	1/1:6,0:13:6.99:76,7,0	0/0:6,0:16:29.31:0,29,135	1/1:4,0:13:12.34:103,12,0	1/1:5,1:20:25.53:239,26,0	1/1:6,0:13:1.74:58,2,0	1/1:4,1:18:27.76:135,28,0	1/1:4,9:14:23.93:299,24,0	1/1:7,2:8:5.85:79,6,0	1/1:7,12:20:20.17:439,20,0	1/1:1,11:12:19.04:273,19,0	1/1:1,0:10:12.50:70,12,0	1/1:3,1:13:11.83:127,12,0	0/1:1,0:10:3.09:45,0,3	0/0:11,0:12:33.11:0,33,626	1/1:6,6:13:20.86:260,21,0	0/1:4,12:17:0.31:271,0,0	1/1:0,8:8:9.03:118,9,0
chr10	39399014	.	C	CT	3711.84	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-2.387;DP=552;FS=2.366;HRun=8;HaplotypeScore=84.7644;InbreedingCoeff=0.9944;MQ=66.09;MQ0=1;MQRankSum=-0.047;QD=24.75;ReadPosRankSum=-0.777;VQSLOD=3.9176;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:66.03:0,66,603	0/0:10,0:9:26.97:0,27,239	0/0:23,0:20:39:0,39,412	0/0:27,0:22:41.82:0,42,342	0/0:27,0:27:65.94:0,66,591	0/0:24,0:24:51.01:0,51,466	0/0:13,0:13:30.01:0,30,274	1/1:11,24:35:69.19:780,69,0	0/0:13,0:13:39.02:0,39,354	0/0:21,0:21:54.01:0,54,491	0/0:19,0:18:45.02:0,45,410	0/0:19,0:17:42:0,42,378	0/0:17,0:17:48.02:0,48,439	0/0:17,0:17:36.01:0,36,330	0/0:11,0:11:20.99:0,21,192	0/0:19,0:19:54.03:0,54,494	0/0:19,0:18:35.97:0,36,321	0/0:25,0:25:51.01:0,51,466	1/1:7,18:25:53.16:572,53,0	1/1:6,20:27:60.17:678,60,0	1/1:2,9:11:24.07:277,24,0	0/0:16,0:16:45.02:0,45,411	0/0:26,0:26:54:0,54,488	0/0:8,0:8:14.41:0,14,136	0/0:24,0:24:60.02:0,60,545	1/1:2,19:21:54.16:622,54,0	1/1:2,20:21:48.14:554,48,0	1/1:2,7:9:21.03:228,21,0
chr10	39399048	.	C	CAGGGCCTTGCGCTTGCTAGG	5606.95	PASS	AC=36;AF=0.857;AN=42;BaseQRankSum=2.429;DP=144;FS=16.868;HRun=0;HaplotypeScore=101.3678;InbreedingCoeff=0.3963;MQ=102.18;MQ0=0;MQRankSum=-5.321;QD=124.60;ReadPosRankSum=0.125;VQSLOD=3.4721;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,0:2:2.99:71,3,0	1/1:1,0:1:2.99:24,3,0	0/0:38,0:32:91.18:0,91,3563	0/0:40,0:28:52.43:0,52,2740	./.	1/1:1,2:3:7.27:544,7,0	./.	1/1:4,0:4:3.89:29,4,0	1/1:0,1:1:3.01:278,3,0	1/1:2,0:2:6.02:156,6,0	1/1:1,0:1:3.01:52,3,0	1/1:5,5:10:28.32:1533,28,0	1/1:0,2:2:6.02:548,6,0	1/1:1,1:2:3.01:90,3,0	1/1:1,1:2:3.90:278,4,0	1/1:0,1:1:3.01:277,3,0	1/1:0,2:1:3.01:273,3,0	1/1:3,2:5:11.95:596,12,0	./.	1/1:2,0:2:3:25,3,0	./.	./.	./.	./.	0/0:20,0:20:57.17:0,57,2868	1/1:1,0:1:3.01:270,3,0	1/1:0,1:1:3.01:289,3,0	1/1:1,0:1:3.01:275,3,0
chr10	39399050	.	A	AAGCG	1209.29	PASS	AC=28;AF=0.824;AN=34;BaseQRankSum=6.433;DP=139;FS=22.843;HRun=0;HaplotypeScore=69.8067;InbreedingCoeff=0.4856;MQ=101.71;MQ0=0;MQRankSum=-4.938;QD=28.79;ReadPosRankSum=1.773;VQSLOD=1.7730;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,0:3:5.19:27,5,0	./.	0/0:37,0:31:90.26:0,90,1613	0/0:36,0:27:62.92:0,63,1142	./.	1/1:2,2:4:9.01:148,9,0	./.	1/1:6,0:6:2.97:20,3,0	1/1:0,1:1:3.01:69,3,0	1/1:1,0:1:3:26,3,0	./.	1/1:1,6:6:18.04:349,18,0	1/1:0,2:2:6.02:134,6,0	1/1:1,1:2:2.97:20,3,0	1/1:2,1:3:6.01:93,6,0	1/1:0,1:1:3.01:69,3,0	1/1:2,2:3:3.01:65,3,0	1/1:3,2:5:9.03:177,9,0	./.	./.	./.	./.	./.	./.	0/0:19,0:19:57.18:0,57,1145	./.	1/1:0,1:1:3.01:63,3,0	1/1:0,0:1:3.01:71,3,0
chr10	39399051	.	CAT	C	804.74	PASS	AC=40;AF=0.870;AN=46;BaseQRankSum=1.671;DP=162;FS=50.315;HRun=0;HaplotypeScore=58.9833;InbreedingCoeff=0.4934;MQ=96.43;MQ0=0;MQRankSum=-4.034;QD=11.83;ReadPosRankSum=-4.153;VQSLOD=1.1075;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,0:9:14.95:119,15,0	1/1:2,0:2:5.99:50,6,0	0/0:36,0:30:90.22:0,90,1432	0/0:36,0:27:62.22:0,62,1032	./.	1/1:8,0:8:20.48:156,20,0	1/1:1,0:1:2.98:21,3,0	1/1:0,6:6:14.98:125,15,0	1/1:1,0:1:2.60:10,3,0	1/1:2,0:2:3.89:31,4,0	./.	1/1:8,0:6:3.94:42,4,0	1/1:2,0:2:0.94:7,1,0	1/1:3,0:3:0.47:1,0,0	1/1:4,0:4:11.47:80,11,0	1/1:1,0:1:2.60:10,3,0	1/1:4,0:3:2.22:7,2,0	1/1:5,0:5:11.29:75,11,0	1/1:3,0:3:8.95:69,9,0	./.	1/1:2,0:2:2.98:21,3,0	1/1:2,0:2:5.99:50,6,0	./.	./.	0/0:19,0:19:57.20:0,57,1138	1/1:3,0:3:4.73:48,5,0	1/1:1,0:1:0.89:2,1,0	1/1:1,0:1:2.80:13,3,0
chr10	39399053	.	T	TC	2382.98	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=8.063;DP=342;FS=17.311;HRun=0;HaplotypeScore=187.3782;InbreedingCoeff=0.6900;MQ=74.34;MQ0=0;MQRankSum=-8.075;QD=9.46;ReadPosRankSum=-0.852;VQSLOD=2.5054;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:25:25.26:179,25,0	1/1:4,0:4:8.95:69,9,0	0/0:37,0:30:54.01:0,54,979	0/0:34,0:26:37.37:0,37,623	1/1:5,6:11:10.43:56,10,0	1/1:14,0:14:31.79:199,32,0	1/1:14,0:14:36.31:223,36,0	1/1:16,0:16:29.93:257,30,0	1/1:5,0:5:9.65:56,10,0	1/1:13,0:13:19.86:149,20,0	1/1:7,5:12:5.50:27,6,0	1/1:14,0:12:17.93:123,18,0	1/1:8,0:8:13.44:86,13,0	1/1:4,0:4:2.87:15,3,0	1/1:9,0:9:20:132,20,0	1/1:8,0:8:21.54:105,22,0	1/1:9,0:8:12.86:51,13,0	1/1:8,0:8:20.45:120,20,0	1/1:8,0:8:13.53:88,14,0	1/1:4,7:11:5.20:28,5,0	1/1:9,0:9:3.01:45,3,0	1/1:8,0:8:11.41:77,11,0	1/1:5,5:10:7.84:41,8,0	1/1:5,0:5:5.86:36,6,0	0/0:19,0:19:57.19:0,57,797	1/1:6,8:14:28.22:191,28,0	1/1:9,0:9:20.72:147,21,0	1/1:3,1:4:7.62:31,8,0
chr10	39399511	.	C	CAGA	373.45	PASS	AB=0.834;AC=4;AF=0.071;AN=56;BaseQRankSum=5.600;DP=714;FS=50.075;HRun=0;HaplotypeScore=157.6964;InbreedingCoeff=-0.0769;MQ=81.74;MQ0=0;MQRankSum=-5.643;QD=4.39;ReadPosRankSum=-0.243;VQSLOD=1.3663;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,123,1943	0/1:10,7:17:32.99:33,0,449	0/0:19,0:19:48.09:0,48,693	0/0:26,0:26:49.81:0,50,679	0/0:32,8:40:87.27:0,87,1352	0/0:18,0:18:45.15:0,45,723	0/0:29,1:30:81.25:0,81,1254	0/0:21,0:21:54.18:0,54,868	0/0:27,0:27:66.20:0,66,1014	0/1:27,3:30:99:170,0,1163	0/0:20,11:31:60.19:0,60,941	0/0:17,0:17:45.15:0,45,710	0/0:19,0:19:48.16:0,48,769	0/0:24,0:24:60.16:0,60,913	0/0:24,0:24:60.20:0,60,962	0/0:18,0:18:51.17:0,51,820	0/0:28,0:28:81.25:0,81,1277	0/0:27,0:27:72.25:0,72,1157	0/0:14,0:14:36.12:0,36,578	0/0:25,4:29:66.02:0,66,1037	0/0:25,0:25:66.19:0,66,1012	0/0:17,6:23:33.11:0,33,530	0/0:26,9:35:60.20:0,60,964	0/0:33,0:33:96.33:0,96,1543	0/0:22,7:29:63.21:0,63,1012	0/1:25,2:27:99:111,0,988	0/0:29,0:29:72.23:0,72,1134	0/1:8,3:11:99:168,0,307
chr10	39400556	.	TG	T	1139.79	PASS	AB=0.818;AC=9;AF=0.161;AN=56;BaseQRankSum=12.439;DP=850;FS=179.835;HRun=2;HaplotypeScore=111.7978;InbreedingCoeff=-0.1844;MQ=76.42;MQ0=0;MQRankSum=-12.408;QD=4.71;ReadPosRankSum=-0.764;VQSLOD=-0.1215;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:56,2:58:99:0,133,2410	0/1:18,5:23:99:128,0,698	0/0:13,0:13:36.12:0,36,518	0/0:27,0:27:75.19:0,75,1066	0/1:31,8:39:90.65:91,0,1240	0/0:30,0:30:87.28:0,87,1283	0/0:35,0:35:99:0,105,1552	0/0:25,0:25:75.24:0,75,1089	0/0:24,0:24:72.24:0,72,1072	0/1:25,10:35:99:289,0,916	0/1:10,7:17:99:167,0,315	0/0:37,0:37:99:0,111,1654	0/0:26,0:26:78.25:0,78,1148	0/0:31,0:31:90.30:0,90,1349	0/0:41,0:41:99:0,123,1801	0/0:24,0:24:72.24:0,72,1079	0/0:57,1:58:99:0,136,2484	0/0:27,0:27:75.25:0,75,1124	0/0:18,0:18:45.11:0,45,649	0/1:20,4:24:78.61:79,0,825	0/0:39,0:39:99:0,111,1638	0/1:29,3:32:11.15:11,0,1156	0/1:18,6:24:99:150,0,736	0/0:29,0:29:87.29:0,87,1304	0/1:24,13:37:99:357,0,928	0/0:29,2:31:51.40:0,51,1265	0/0:35,0:34:99:0,105,1572	0/1:10,1:11:5.78:6,0,395
chr10	39401745	.	G	GC	4709.63	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=2.163;DP=517;FS=0.000;HRun=1;HaplotypeScore=83.3921;InbreedingCoeff=0.9772;MQ=66.29;MQ0=2;MQRankSum=-2.148;QD=35.41;ReadPosRankSum=-3.126;VQSLOD=3.7749;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:44.82:0,45,196	0/0:7,0:7:13.85:0,14,58	0/0:19,0:11:7.64:0,8,142	0/0:19,0:11:13.58:0,14,182	0/0:33,0:33:89.49:0,89,1121	0/0:19,0:19:57.17:0,57,721	0/0:18,0:18:54.15:0,54,670	1/1:17,11:28:78.09:936,78,0	0/0:19,0:19:54.16:0,54,680	0/0:29,0:29:52.54:0,53,252	0/0:24,0:24:40.96:0,41,194	0/0:15,0:15:45.12:0,45,539	0/0:18,0:18:51.15:0,51,629	0/0:11,0:11:30.07:0,30,354	0/0:13,0:13:39.11:0,39,478	0/0:13,0:13:39.10:0,39,463	0/0:18,0:18:51.15:0,51,631	0/0:13,0:13:25.40:0,25,93	1/1:11,9:20:54.14:705,54,0	1/1:7,15:22:66.09:805,66,0	1/1:5,8:13:30.06:397,30,0	0/0:18,0:18:51.13:0,51,618	0/0:15,0:15:41.95:0,42,491	0/0:7,0:7:21.07:0,21,272	0/0:27,0:27:75.17:0,75,898	1/1:6,11:17:51.16:688,51,0	1/1:7,13:20:51.01:667,51,0	1/1:0,13:13:36.12:512,36,0
chr10	39401753	.	TA	T	2398.69	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=13.102;DP=525;FS=1.238;HRun=11;HaplotypeScore=92.6598;InbreedingCoeff=0.7537;MQ=68.98;MQ0=3;MQRankSum=-2.179;QD=10.16;ReadPosRankSum=4.038;VQSLOD=3.1333;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,25:27:65.92:541,66,0	1/1:1,6:7:20.58:157,21,0	0/0:22,0:11:14.62:0,15,89	0/0:23,0:11:10.24:0,10,82	0/0:35,0:35:99:0,102,1037	0/0:18,0:18:51.13:0,51,541	0/0:22,0:22:34.42:0,34,505	0/1:26,0:26:8.44:75,0,8	0/0:18,1:19:23.50:0,24,445	1/1:7,22:29:66.90:561,67,0	1/1:6,17:23:56.82:456,57,0	0/0:13,0:14:35.19:0,35,399	0/0:17,1:18:20.70:0,21,395	0/0:10,0:10:27.07:0,27,286	0/0:12,0:12:30.06:0,30,310	0/0:13,0:13:33.03:0,33,321	0/0:19,0:19:42.12:0,42,480	1/1:2,12:14:26.97:221,27,0	1/1:17,0:17:24.22:106,24,0	1/1:24,0:24:28.50:157,29,0	1/1:14,0:14:14.23:44,14,0	0/0:16,0:16:25.30:0,25,251	0/0:12,1:13:5.43:0,5,245	0/0:8,0:8:21.03:0,21,214	0/0:25,0:26:59.95:0,60,580	0/1:19,0:19:43.37:110,0,43	1/1:22,0:22:34.65:170,35,0	0/1:14,0:14:13.64:14,0,50
chr10	39401763	.	AAT	A	3723.96	PASS	AB=1.000;AC=16;AF=0.286;AN=56;BaseQRankSum=7.928;DP=527;FS=0.378;HRun=0;HaplotypeScore=95.2127;InbreedingCoeff=0.8285;MQ=70.41;MQ0=2;MQRankSum=-2.024;QD=20.69;ReadPosRankSum=-4.169;VQSLOD=2.5406;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:67.13:0,67,297	0/0:8,0:8:12.79:0,13,65	0/1:22,0:13:16.15:16,0,218	0/1:21,0:10:10.48:10,0,177	0/0:36,0:36:99:0,105,1672	0/0:19,0:19:57.16:0,57,880	0/0:22,0:22:66.09:0,66,964	1/1:2,26:28:80.69:943,81,0	0/0:19,0:19:57.01:0,57,833	0/0:32,0:32:59.19:0,59,328	0/0:23,0:23:32.10:0,32,178	0/0:16,0:16:30.59:0,31,662	0/0:17,0:17:50.97:0,51,707	0/0:12,0:12:36.08:0,36,522	0/0:12,0:12:36.07:0,36,505	0/0:14,0:14:33.97:0,34,555	0/0:17,0:17:51.11:0,51,749	0/0:14,0:14:28.37:0,28,129	1/1:1,17:18:35.22:586,35,0	1/1:4,18:22:43.33:526,43,0	1/1:1,14:15:23.91:317,24,0	0/0:13,0:13:32.42:0,32,413	0/0:11,0:11:32.93:0,33,445	0/0:10,0:10:27.05:0,27,395	0/0:23,0:23:51.27:0,51,732	1/1:2,16:18:45.90:439,46,0	1/1:8,13:21:47.90:612,48,0	1/1:9,6:15:33.72:275,34,0
chr10	39401764	.	AT	A	3174.24	PASS	AB=1.000;AC=16;AF=0.286;AN=56;BaseQRankSum=12.088;DP=523;FS=1.263;HRun=1;HaplotypeScore=84.6554;InbreedingCoeff=0.7365;MQ=72.37;MQ0=2;MQRankSum=-2.616;QD=19.24;ReadPosRankSum=-1.387;VQSLOD=3.4556;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:3.74:0,4,72	0/0:9,0:9:5.94:0,6,56	0/0:23,1:15:10.72:0,11,211	0/0:20,0:9:3.13:0,3,116	0/0:37,0:37:99:0,108,1335	0/0:19,0:19:57.13:0,57,690	0/0:22,0:22:64.03:0,64,755	1/1:26,1:27:78.33:713,78,0	0/0:20,0:20:57.13:0,57,679	0/0:32,0:32:15.13:0,15,208	0/1:23,0:23:15.41:15,0,69	0/0:17,0:17:39.29:0,39,549	0/0:17,0:17:47.18:0,47,561	0/0:12,0:12:36.08:0,36,424	0/0:12,0:12:36.05:0,36,406	0/0:14,0:14:12.31:0,12,403	0/0:17,0:17:50.99:0,51,587	0/0:14,0:14:2.95:0,3,42	1/1:18,0:18:42.85:507,43,0	1/1:21,1:22:62.66:657,63,0	1/1:15,0:15:23.76:229,24,0	0/1:13,0:13:6.68:7,0,312	0/0:11,0:11:30.06:0,30,352	0/0:10,0:10:27.04:0,27,318	0/0:22,0:22:56.99:0,57,627	1/1:17,0:17:45.41:451,45,0	1/1:13,8:21:47.78:539,48,0	1/1:9,0:9:26.98:251,27,0
chr10	39402141	.	GTGATGATGA	G	6246.05	PASS	AB=0.683;AC=27;AF=0.500;AN=54;BaseQRankSum=-5.205;DP=827;FS=0.483;HRun=0;HaplotypeScore=268.1410;InbreedingCoeff=0.6664;MQ=57.08;MQ0=7;MQRankSum=-5.390;QD=15.31;ReadPosRankSum=3.751;VQSLOD=3.5875;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:52:36.19:0,36,243	0/1:12,0:21:1.23:1,0,46	0/0:27,0:19:3.01:0,3,66	0/0:35,0:25:0.39:0,0,264	1/1:10,11:21:9.43:111,9,0	1/1:8,12:20:9.03:113,9,0	1/1:14,10:24:11.83:232,12,0	0/0:42,0:41:57.15:0,57,944	1/1:11,16:27:24.08:551,24,0	0/1:15,1:28:71.60:72,0,128	0/0:7,0:11:8.83:0,9,55	1/1:17,29:46:51.17:1077,51,0	1/1:15,22:37:54.18:1301,54,0	1/1:13,23:36:36.12:699,36,0	1/1:10,17:27:36.12:689,36,0	1/1:8,17:25:27.09:698,27,0	1/1:13,14:27:12.04:329,12,0	0/1:8,1:16:7.33:37,0,7	0/0:24,0:22:11.07:0,11,178	0/0:26,0:26:18.48:0,18,378	0/0:55,0:55:2.89:0,3,38	1/1:18,15:33:17.80:300,18,0	1/1:9,11:20:2.32:36,2,0	./.	0/0:10,0:21:30.07:0,30,593	0/0:37,0:37:69.22:0,69,1296	0/0:39,0:39:67.68:0,68,1135	0/0:16,0:16:21:0,21,248
chr10	39402157	.	T	TAACGAC	118.14	PASS	AB=0.920;AC=4;AF=0.071;AN=56;BaseQRankSum=7.129;DP=846;FS=6.066;HRun=0;HaplotypeScore=292.4582;InbreedingCoeff=-0.0688;MQ=48.78;MQ0=12;MQRankSum=-5.283;QD=0.89;ReadPosRankSum=-5.212;VQSLOD=0.6999;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:57:99:0,110,2187	0/0:14,0:14:33.11:0,33,609	0/0:26,0:12:29.92:0,30,478	0/0:40,0:23:69.23:0,69,1434	0/0:21,0:21:29.48:0,29,578	0/0:15,0:15:15.05:0,15,278	0/0:24,0:24:24.85:0,25,585	0/0:64,0:61:99:0,138,2538	0/0:28,0:28:45.15:0,45,872	0/0:24,0:24:72.23:0,72,1331	0/0:11,0:11:23.84:0,24,382	0/0:40,0:40:78.20:0,78,1242	0/0:31,0:31:78.25:0,78,1274	0/0:36,0:36:63.17:0,63,1092	0/0:29,0:29:69.20:0,69,1146	0/0:30,0:30:66.21:0,66,1141	0/0:29,0:29:40.92:0,41,658	0/0:14,0:14:30.06:0,30,499	0/0:19,0:15:41.81:0,42,734	0/1:31,0:31:0.50:0,0,474	0/0:57,0:57:14.61:0,15,469	0/0:31,0:31:54.16:0,54,1022	0/0:19,0:19:16.65:0,17,319	0/0:33,0:33:27.09:0,27,573	0/0:21,0:21:50.87:0,51,744	0/1:44,1:45:87.99:88,0,1486	0/1:41,3:44:16.40:16,0,1381	0/1:9,4:13:99:112,0,389
chr10	39402166	.	T	TGACAAC	2033.90	PASS	AB=0.949;AC=7;AF=0.125;AN=56;BaseQRankSum=7.004;DP=838;FS=3.865;HRun=0;HaplotypeScore=279.9637;InbreedingCoeff=-0.1450;MQ=45.30;MQ0=13;MQRankSum=-8.181;QD=7.37;ReadPosRankSum=-5.260;VQSLOD=1.4662;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:57:99:0,104,1872	0/0:13,0:13:30.08:0,30,485	0/0:27,0:8:14.94:0,15,249	0/0:42,0:20:45.15:0,45,918	0/0:21,0:21:26.07:0,26,487	0/0:15,0:15:15.05:0,15,297	0/0:26,0:26:34.41:0,34,634	0/1:69,0:66:99:625,0,1841	0/0:27,0:27:39.12:0,39,692	0/0:24,0:24:68.60:0,69,1251	0/0:11,0:11:23.89:0,24,454	0/0:41,0:41:78.18:0,78,1401	0/0:32,0:32:78.26:0,78,1306	0/0:32,0:32:51.17:0,51,926	0/0:26,0:26:57.19:0,57,1027	0/0:25,0:25:39.12:0,39,636	0/0:29,0:29:39.12:0,39,702	0/0:15,0:15:27.09:0,27,499	0/1:23,0:19:99:118,0,534	0/1:30,0:30:99:152,0,341	0/1:59,0:59:99:106,0,244	0/0:27,0:27:40.72:0,41,625	0/0:18,0:18:17.40:0,17,303	0/0:35,0:35:33:0,33,525	0/0:19,0:19:44.60:0,45,633	0/1:43,1:43:99:513,0,1064	0/1:37,3:40:99:356,0,1070	0/1:7,4:11:99:295,0,137
chr10	39402181	.	TGACAAC	T	602.61	PASS	AB=0.954;AC=7;AF=0.125;AN=56;BaseQRankSum=1.501;DP=873;FS=0.916;HRun=0;HaplotypeScore=290.7840;InbreedingCoeff=-0.1489;MQ=46.80;MQ0=9;MQRankSum=-5.841;QD=2.08;ReadPosRankSum=-1.354;VQSLOD=2.1457;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:54.97:0,55,1267	0/1:12,0:12:11.35:11,0,222	0/0:26,0:12:35.33:0,35,777	0/0:36,0:17:44.16:0,44,893	0/0:22,0:22:29.99:0,30,630	0/0:22,0:22:30.10:0,30,704	0/0:27,0:27:15.93:0,16,749	0/1:76,0:74:99:157,0,702	0/0:25,0:25:17.34:0,17,445	0/0:24,0:24:24.02:0,24,949	0/0:10,0:10:18.06:0,18,426	0/0:42,0:42:31.73:0,32,788	0/0:34,0:34:51.88:0,52,843	0/0:34,0:34:44.50:0,44,689	0/0:28,0:28:44.55:0,45,735	0/0:27,0:27:46.35:0,46,582	0/0:31,0:31:33.67:0,34,746	0/0:19,0:19:26.26:0,26,590	0/0:26,0:24:4.67:0,5,252	0/1:33,0:33:99:155,0,149	0/1:40,31:71:22.88:23,0,134	0/0:25,0:25:28.61:0,29,587	0/0:19,0:19:21.07:0,21,481	0/0:35,0:35:27.91:0,28,720	0/0:19,0:19:38.17:0,38,824	0/1:46,0:46:99:216,0,730	0/1:38,0:38:99:132,0,324	0/1:13,0:13:37.82:38,0,231
chr10	39402681	.	CTGTTTT	C	8760.51	PASS	AB=0.578;AC=25;AF=0.446;AN=56;BaseQRankSum=15.517;DP=636;FS=8.344;HRun=0;HaplotypeScore=128.8656;InbreedingCoeff=0.9090;MQ=58.07;MQ0=2;MQRankSum=-14.598;QD=30.31;ReadPosRankSum=0.959;VQSLOD=4.0873;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:26:60.20:0,60,1889	0/0:19,0:19:48.15:0,48,1248	0/0:19,0:16:15.10:0,15,615	0/0:19,0:18:15.20:0,15,576	0/1:7,19:26:27.46:668,0,27	1/1:8,19:27:48.16:981,48,0	1/1:11,14:25:24.08:505,24,0	0/0:30,0:29:57.19:0,57,1586	1/1:8,16:24:36.12:758,36,0	0/0:22,0:22:45.15:0,45,1271	0/0:20,0:20:51.17:0,51,1525	1/1:8,18:26:30.10:632,30,0	1/1:5,14:19:36.12:758,36,0	1/1:3,13:16:24.08:505,24,0	1/1:5,26:31:54.19:1137,54,0	1/1:5,14:19:36.12:758,36,0	1/1:8,18:26:10.82:534,11,0	0/0:18,0:18:42.14:0,42,1221	0/0:31,0:31:69.21:0,69,1880	0/0:29,0:29:75.25:0,75,2362	0/0:23,0:23:51.17:0,51,1520	1/1:3,15:18:42.14:797,42,0	1/1:5,15:20:26.69:537,27,0	1/1:1,11:12:9.03:190,9,0	0/0:23,0:23:51.16:0,51,1374	0/0:19,0:19:45.15:0,45,1437	0/0:34,0:34:69.23:0,69,2003	0/0:14,0:14:30.10:0,30,974
chr10	39404735	.	A	AC	6078.30	PASS	AB=0.568;AC=25;AF=0.446;AN=56;BaseQRankSum=-12.978;DP=514;FS=0.360;HRun=8;HaplotypeScore=53.8669;InbreedingCoeff=0.9198;MQ=84.90;MQ0=0;MQRankSum=-0.825;QD=27.50;ReadPosRankSum=2.222;VQSLOD=5.3366;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:78:0,78,702	0/0:5,0:5:12.01:0,12,110	0/0:16,0:16:37.74:0,38,294	0/0:28,0:26:22.76:0,23,323	1/1:3,10:13:30.09:344,30,0	1/1:1,7:8:18.05:208,18,0	1/1:11,21:32:81.03:884,81,0	0/0:22,0:22:29.98:0,30,274	1/1:1,13:14:36.11:415,36,0	0/0:19,0:19:51.02:0,51,464	0/0:11,0:11:33.02:0,33,302	1/1:0,18:18:54.16:623,54,0	1/1:2,11:13:27.08:312,27,0	0/1:5,15:21:37.38:350,0,37	1/1:5,19:24:26.69:558,27,0	1/1:1,12:13:36.11:415,36,0	1/1:1,25:26:66.20:762,66,0	0/0:27,0:27:78.04:0,78,713	0/0:28,0:29:55.95:0,56,482	0/0:8,0:8:21:0,21,192	0/0:34,0:34:99:0,102,913	1/1:0,10:10:27.08:312,27,0	1/1:1,8:9:21.06:240,21,0	1/1:2,18:20:57.17:657,57,0	0/0:18,0:18:51.02:0,51,464	0/0:19,0:19:54.03:0,54,493	0/0:13,0:13:26.99:0,27,247	0/0:8,0:8:24.01:0,24,219
chr10	39405146	.	ATGTG	A	2651.18	PASS	AB=0.875;AC=15;AF=0.268;AN=56;BaseQRankSum=4.462;DP=685;FS=0.451;HRun=0;HaplotypeScore=128.5000;InbreedingCoeff=0.8672;MQ=55.46;MQ0=15;MQRankSum=-5.683;QD=15.69;ReadPosRankSum=-2.955;VQSLOD=2.5191;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:74.66:0,75,1051	0/1:6,0:7:9.75:10,0,198	0/0:21,0:8:12.03:0,12,164	0/0:30,0:15:14.99:0,15,206	0/0:21,0:21:48.15:0,48,952	0/0:31,0:31:78.25:0,78,1597	0/0:18,0:18:35.77:0,36,576	1/1:44,3:41:72:773,72,0	0/0:5,0:16:21.07:0,21,370	0/0:29,0:27:64.08:0,64,901	0/0:10,0:10:12.02:0,12,162	0/0:34,0:34:69.58:0,70,1412	0/0:26,0:26:69.24:0,69,1549	0/0:21,0:24:59.77:0,60,1147	0/0:34,0:34:73.99:0,74,1580	0/0:29,0:29:66.23:0,66,1406	0/0:28,0:27:57.20:0,57,1269	0/0:19,0:19:4.43:0,4,333	1/1:10,2:11:18.06:257,18,0	1/1:13,4:16:17.95:190,18,0	1/1:35,1:35:37.06:490,37,0	0/0:18,0:18:45.13:0,45,926	0/0:24,0:24:56.95:0,57,1120	0/0:34,0:35:89.98:0,90,1817	0/0:23,0:23:56.63:0,57,1050	1/1:10,11:20:48.10:658,48,0	1/1:8,10:17:29.98:366,30,0	1/1:9,1:10:9.01:102,9,0
chr10	39405166	.	ATG	A	3844.06	PASS	AB=1.000;AC=25;AF=0.446;AN=56;BaseQRankSum=11.241;DP=683;FS=0.000;HRun=0;HaplotypeScore=103.9973;InbreedingCoeff=0.8378;MQ=59.51;MQ0=26;MQRankSum=-2.040;QD=14.24;ReadPosRankSum=-0.603;VQSLOD=3.3514;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,37:46:31.01:586,31,0	1/1:2,4:6:9.01:97,9,0	0/0:27,0:6:4.10:0,4,24	0/0:47,0:15:28.11:0,28,357	0/0:21,0:21:54.60:0,55,839	0/0:27,0:27:57.19:0,57,924	0/1:23,0:23:21.48:21,0,632	1/1:14,13:19:41.78:443,42,0	0/0:17,0:16:36.10:0,36,541	1/1:8,21:26:46.31:698,46,0	1/1:2,7:9:5.63:74,6,0	0/0:31,0:31:69.67:0,70,1051	0/0:27,0:27:63.19:0,63,974	0/0:26,0:26:62.13:0,62,998	0/0:36,0:36:25.82:0,26,1193	0/0:27,0:27:51.14:0,51,781	0/0:23,0:22:51.15:0,51,791	1/1:4,14:18:21.07:260,21,0	1/1:4,7:10:21.03:223,21,0	1/1:4,11:14:6.02:67,6,0	1/1:29,7:36:37.82:397,38,0	0/0:24,0:24:56.68:0,57,837	0/0:19,1:20:5.53:0,6,578	0/0:37,1:38:52.18:0,52,1317	0/0:21,0:21:45.15:0,45,726	1/1:4,20:22:56.50:613,57,0	1/1:5,17:21:28.87:294,29,0	1/1:2,1:3:6.02:71,6,0
chr10	39407531	.	A	AT	1411.25	PASS	AB=1.000;AC=13;AF=0.241;AN=54;BaseQRankSum=-6.391;DP=520;FS=4.661;HRun=8;HaplotypeScore=87.7319;InbreedingCoeff=0.6852;MQ=65.52;MQ0=1;MQRankSum=-0.168;QD=9.41;ReadPosRankSum=-0.324;VQSLOD=2.0999;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:94.81:0,95,813	0/0:9,0:9:21.01:0,21,192	0/0:7,0:6:11.95:0,12,97	./.	0/0:30,0:30:80.96:0,81,718	0/0:22,0:22:59.99:0,60,539	0/0:13,0:13:36.02:0,36,329	0/1:26,0:26:35.53:137,0,36	0/0:12,0:12:35.99:0,36,319	0/0:25,0:25:66.41:0,66,583	0/0:22,0:22:56.52:0,57,501	0/0:23,0:23:63.02:0,63,570	0/0:19,0:19:48.01:0,48,435	0/0:13,0:13:32.98:0,33,291	0/0:21,0:21:57.03:0,57,521	0/0:25,0:25:69.02:0,69,626	0/0:20,0:20:56.99:0,57,510	0/0:22,0:22:50.75:0,51,448	0/1:13,0:13:20.43:52,0,20	1/1:20,0:20:51.66:235,52,0	1/1:5,0:5:10.53:43,11,0	0/0:12,0:12:36.01:0,36,327	0/0:22,0:22:62.96:0,63,554	0/0:12,0:12:35.99:0,36,323	1/1:3,17:20:48.14:554,48,0	0/1:24,0:24:15.09:133,0,15	1/1:27,0:27:65.25:286,65,0	1/1:15,0:15:35.22:153,35,0
chr10	39407539	.	T	TA	4596.23	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=-12.549;DP=545;FS=1.203;HRun=6;HaplotypeScore=77.9136;InbreedingCoeff=0.5990;MQ=63.91;MQ0=1;MQRankSum=0.922;QD=16.84;ReadPosRankSum=-2.596;VQSLOD=4.3195;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:36,0:36:48.67:49,0,53	0/1:10,0:10:12.92:58,0,13	0/0:5,0:4:6.01:0,6,60	0/0:5,0:3:2.98:0,3,22	0/0:30,0:30:78.06:0,78,766	0/0:22,0:22:53.11:0,53,567	0/0:14,0:14:42:0,42,405	1/1:5,23:28:69.16:804,69,0	0/0:14,0:14:39.04:0,39,381	0/1:28,0:28:7.04:115,0,7	0/1:21,0:21:16.26:16,0,24	0/0:23,0:23:60.12:0,60,606	0/0:19,0:19:54.07:0,54,529	0/0:14,0:14:33.05:0,33,325	0/0:24,0:24:66.09:0,66,646	0/0:26,0:26:72.12:0,72,716	0/0:22,0:22:57.08:0,57,565	0/1:21,0:21:15.44:15,0,45	1/1:2,11:13:33.09:388,33,0	1/1:2,23:25:69.03:784,69,0	1/1:0,5:5:12.04:149,12,0	0/0:13,0:13:36.07:0,36,362	0/0:24,0:24:51.09:0,51,513	0/0:17,0:17:48.04:0,48,457	1/1:17,0:17:37.51:125,38,0	1/1:5,18:23:59.16:721,59,0	1/1:0,33:33:72.23:890,72,0	1/1:0,13:13:39.12:483,39,0
chr10	39408350	.	C	CTT	5495.64	PASS	AB=0.538;AC=35;AF=0.625;AN=56;BaseQRankSum=7.323;DP=615;FS=1.944;HRun=9;HaplotypeScore=92.3495;InbreedingCoeff=0.9313;MQ=63.67;MQ0=0;MQRankSum=1.720;QD=13.81;ReadPosRankSum=2.739;VQSLOD=2.6687;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,27:31:66.22:998,66,0	1/1:0,6:6:18.06:277,18,0	0/0:14,0:12:20.84:0,21,208	0/0:11,0:11:16.30:0,16,129	0/1:4,0:28:2.33:127,0,2	1/1:3,0:19:39.93:137,40,0	1/1:5,0:28:52.13:179,52,0	0/0:38,0:38:87.14:0,87,899	1/1:1,0:18:39.93:137,40,0	1/1:4,17:21:19.19:643,19,0	1/1:1,19:21:48.81:650,49,0	1/1:1,0:19:42.30:145,42,0	1/1:1,0:21:44.92:154,45,0	1/1:5,0:20:6.01:88,6,0	1/1:3,0:24:33.20:134,33,0	1/1:0,0:20:42.42:145,42,0	1/1:1,0:23:54.44:186,54,0	1/1:1,24:25:66.22:1016,66,0	0/0:28,0:28:69.12:0,69,707	0/0:22,0:22:59.10:0,59,664	0/0:15,0:15:36.06:0,36,383	1/1:5,0:29:43.21:155,43,0	1/1:3,0:30:59.76:206,60,0	1/1:0,0:14:34.93:120,35,0	0/0:23,0:23:63.11:0,63,655	0/0:32,0:32:84.17:0,84,880	0/0:26,0:25:66.14:0,66,701	0/0:7,0:7:21.05:0,21,224
chr10	39411562	.	CCTT	C	1514.09	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.796;DP=710;FS=1.441;HRun=0;HaplotypeScore=98.1411;InbreedingCoeff=0.9995;MQ=76.92;MQ0=0;MQRankSum=-0.192;QD=37.85;ReadPosRankSum=2.858;VQSLOD=4.3750;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:93.26:0,93,2024	0/0:10,0:10:30.10:0,30,691	0/0:27,0:27:75:0,75,1484	0/0:15,0:15:42.04:0,42,866	0/0:24,0:24:66.22:0,66,1473	0/0:23,0:23:66.18:0,66,1472	0/0:14,0:14:42.10:0,42,886	0/0:31,0:31:90.29:0,90,1897	0/0:25,0:25:75.25:0,75,1685	0/0:32,0:32:95.98:0,96,2095	0/0:24,0:24:72.11:0,72,1446	0/0:24,0:24:63.20:0,63,1408	1/1:1,23:24:60.21:1022,60,0	1/1:0,16:16:36.12:613,36,0	0/0:32,0:32:87.28:0,87,1958	0/0:23,0:23:66.22:0,66,1460	0/0:38,0:38:99:0,114,2579	0/0:18,0:18:54.17:0,54,1169	0/0:22,0:22:60.13:0,60,1156	0/0:37,0:37:99:0,111,2382	0/0:33,0:33:99:0,99,2262	0/0:27,0:27:72.25:0,72,1627	0/0:26,0:26:75.25:0,75,1595	0/0:17,0:17:51.16:0,51,1131	0/0:33,0:33:90.26:0,90,1950	0/0:26,0:26:75.26:0,75,1710	0/0:47,0:46:99:0,141,3164	0/0:11,0:11:33.04:0,33,620
chr10	39412381	.	GA	G	1273.33	PASS	AB=0.904;AC=16;AF=0.286;AN=56;BaseQRankSum=3.641;DP=510;FS=7.784;HRun=9;HaplotypeScore=90.7998;InbreedingCoeff=0.6771;MQ=55.86;MQ0=9;MQRankSum=-7.630;QD=9.50;ReadPosRankSum=1.896;VQSLOD=2.0228;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:33:51.14:0,51,577	0/0:6,0:6:8.98:0,9,81	0/0:28,0:8:14.38:0,14,167	0/0:20,0:5:0.87:0,1,16	0/0:25,0:25:25.56:0,26,247	0/0:13,0:12:15.52:0,16,174	0/0:21,0:20:14.97:0,15,158	1/1:4,20:24:56.94:520,57,0	0/0:14,0:14:23.81:0,24,234	0/0:21,0:21:42.09:0,42,471	0/0:18,0:17:32.47:0,32,318	0/0:14,0:14:24.50:0,24,243	0/0:17,0:17:24.51:0,25,239	0/1:11,2:13:36.79:37,0,121	0/0:20,0:20:22.38:0,22,207	0/0:16,1:17:2.54:0,3,260	0/0:29,0:28:38.50:0,39,377	0/0:28,0:28:37.34:0,37,352	1/1:7,8:16:23.80:219,24,0	1/1:10,8:18:9.04:105,9,0	1/1:2,1:3:2.91:27,3,0	0/0:21,0:21:26.68:0,27,301	0/0:10,0:10:9.03:0,9,104	0/0:19,0:18:20.94:0,21,234	0/1:15,1:16:11.89:12,0,124	1/1:5,10:13:27:247,27,0	1/1:12,12:23:24.88:243,25,0	1/1:4,1:5:5.93:48,6,0
chr10	39412863	.	CATA	C	7684.78	PASS	AB=0.511;AC=13;AF=0.232;AN=56;BaseQRankSum=15.129;DP=725;FS=13.872;HRun=0;HaplotypeScore=102.5407;InbreedingCoeff=0.9478;MQ=83.02;MQ0=0;MQRankSum=-5.052;QD=44.42;ReadPosRankSum=0.442;VQSLOD=5.8099;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,111,2519	0/0:6,0:6:15.05:0,15,346	0/0:20,0:20:54.19:0,54,1198	0/0:23,0:23:63.19:0,63,1334	0/0:28,0:28:84.29:0,84,1879	0/0:28,0:28:72.23:0,72,1616	0/0:15,0:15:45.15:0,45,1035	1/1:1,29:28:78.25:1303,78,0	0/0:26,0:26:78.27:0,78,1745	0/0:37,0:37:99:0,102,2218	0/0:24,0:24:69.19:0,69,1526	0/0:30,0:30:87.30:0,87,2004	0/0:27,0:27:75.26:0,75,1678	0/0:28,0:28:84.27:0,84,1893	0/0:32,0:32:93.28:0,93,2096	0/0:29,0:29:84.29:0,84,1906	0/0:37,0:37:99:0,111,2508	0/0:19,0:19:54.19:0,54,1244	1/1:0,18:18:54.18:911,54,0	1/1:0,24:24:63.21:1051,63,0	1/1:1,33:34:93.32:1586,93,0	0/0:21,0:21:63.22:0,63,1436	0/0:31,0:31:93.32:0,93,2139	0/0:26,0:26:78.27:0,78,1793	0/0:24,0:24:66.22:0,66,1458	0/1:1,22:23:0.02:993,0,0	1/1:3,32:34:83.81:1431,84,0	1/1:0,9:9:24.08:409,24,0
chr10	39413040	.	A	AAAAC	6976.42	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-10.085;DP=679;FS=3.682;HRun=0;HaplotypeScore=143.1308;InbreedingCoeff=0.9414;MQ=59.59;MQ0=18;MQRankSum=-4.402;QD=38.76;ReadPosRankSum=-1.730;VQSLOD=4.8070;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:27.26:0,27,634	0/0:4,0:4:9.03:0,9,149	0/0:66,0:22:12.41:0,12,450	0/0:71,0:27:26.16:0,26,456	0/0:27,0:27:48.16:0,48,791	0/0:29,0:29:24.68:0,25,766	0/0:12,0:12:2.94:0,3,279	1/1:11,30:42:90.31:1981,90,0	0/0:17,0:17:21.05:0,21,300	0/0:24,0:23:60.18:0,60,903	0/0:22,0:22:45.13:0,45,691	0/0:21,0:20:36.04:0,36,493	0/0:20,0:19:36.12:0,36,588	0/0:20,0:20:45.13:0,45,696	0/0:18,0:17:36.10:0,36,547	0/0:20,0:20:30.10:0,30,495	0/0:23,0:23:35.97:0,36,683	0/0:12,0:12:20.43:0,20,306	1/1:7,12:20:45.14:948,45,0	1/1:8,19:29:56.93:1016,57,0	1/1:6,7:14:15.05:344,15,0	0/0:18,0:18:33.10:0,33,520	0/0:18,0:17:45.11:0,45,709	0/0:17,0:17:21.44:0,21,481	0/0:14,0:14:27.07:0,27,380	1/1:21,13:34:36.23:1227,36,0	1/1:14,17:33:48.16:1166,48,0	1/1:0,6:6:12.04:294,12,0
chr10	39414384	.	ACT	A	23381.48	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=15.568;DP=820;FS=2.224;HRun=0;HaplotypeScore=101.5556;InbreedingCoeff=1.0000;MQ=86.38;MQ0=0;MQRankSum=-4.190;QD=44.20;ReadPosRankSum=7.711;VQSLOD=6.2683;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,49:49:99:2248,138,0	1/1:0,16:16:39.13:635,39,0	0/0:28,0:28:67.66:0,68,1392	0/0:26,0:26:78.06:0,78,1367	1/1:0,22:22:63.22:1026,63,0	1/1:0,25:25:69.24:1124,69,0	1/1:0,25:25:69.24:1125,69,0	0/0:29,0:29:87.28:0,87,1687	1/1:0,27:27:69.24:1124,69,0	1/1:0,42:42:99:1906,123,0	1/1:0,25:25:60.20:966,60,0	1/1:0,34:34:90.31:1466,90,0	1/1:0,36:36:99:1613,99,0	1/1:0,23:23:63.21:1015,63,0	1/1:0,30:30:84.29:1368,84,0	1/1:0,37:37:99:1662,102,0	1/1:0,37:37:99:1662,102,0	1/1:0,21:21:60.20:977,60,0	0/0:34,0:34:99:0,102,1888	0/0:31,0:31:90.29:0,90,1735	0/0:44,0:44:99:0,129,2517	1/1:0,29:29:78.27:1265,78,0	1/1:0,24:24:63.16:1026,63,0	1/1:0,27:27:72.25:1173,72,0	0/0:20,0:20:60.21:0,60,1205	0/0:34,0:34:99:0,99,1925	0/0:33,0:33:99:0,99,1898	0/0:12,0:12:36.11:0,36,694
chr10	39416417	.	TCCACTGTGC	T	2598.97	PASS	AB=0.705;AC=13;AF=0.260;AN=50;BaseQRankSum=7.973;DP=637;FS=4.600;HRun=0;HaplotypeScore=80.8230;InbreedingCoeff=0.1357;MQ=30.00;MQ0=158;MQRankSum=-5.470;QD=15.85;ReadPosRankSum=-0.465;VQSLOD=1.6147;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:26,10:17:99:465,0,279	1/1:3,2:1:3.01:92,3,0	./.	./.	0/0:20,0:14:15.05:0,15,757	0/0:28,0:19:21.07:0,21,1062	0/0:19,0:14:9.03:0,9,455	0/0:21,5:2:4.26:0,4,155	0/0:31,0:28:15.05:0,15,715	0/1:2,6:2:91.16:91,0,146	0/1:5,5:6:99:254,0,186	0/0:31,0:27:17.85:0,18,795	0/0:50,0:43:40.66:0,41,1899	0/0:48,0:41:30.09:0,30,1224	0/0:34,0:29:14.93:0,15,398	0/0:25,0:22:23.49:0,23,1099	0/0:22,0:14:12.02:0,12,479	1/1:5,4:3:9.03:286,9,0	0/1:10,2:3:48.73:49,0,288	0/1:11,13:10:99:345,0,433	./.	0/0:15,0:13:9.03:0,9,451	0/0:15,0:13:23.59:0,24,1158	0/0:23,0:20:21.07:0,21,892	0/0:24,0:21:36.59:0,37,1796	0/1:14,14:11:99:445,0,876	0/1:17,9:16:99:531,0,524	1/1:3,3:4:6.02:191,6,0
chr10	39416432	.	G	GA	1482.90	PASS	AB=0.707;AC=14;AF=0.280;AN=50;BaseQRankSum=8.556;DP=688;FS=1.683;HRun=0;HaplotypeScore=62.4670;InbreedingCoeff=0.0911;MQ=27.69;MQ0=196;MQRankSum=-4.907;QD=6.42;ReadPosRankSum=0.021;VQSLOD=3.3920;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:23,19:23:99:366,0,120	1/1:3,3:1:3.01:42,3,0	./.	./.	0/0:15,0:9:12.04:0,12,167	0/0:28,0:21:24.08:0,24,329	0/0:20,0:13:11.95:0,12,142	0/1:22,8:5:31.07:31,0,73	0/0:36,0:30:20.98:0,21,264	0/1:3,8:3:32.75:77,0,33	0/1:6,7:6:32.36:74,0,32	0/0:30,0:26:21.02:0,21,265	0/0:48,0:40:42.10:0,42,558	0/0:52,0:42:30.06:0,30,391	0/0:34,0:26:6.02:0,6,84	0/0:27,0:22:20.78:0,21,292	0/0:17,0:9:6.02:0,6,84	1/1:8,4:4:9.03:135,9,0	0/1:15,3:4:29.89:100,0,30	0/1:17,11:10:99:144,0,104	./.	0/0:17,0:15:12.04:0,12,158	0/0:15,0:10:21.07:0,21,293	0/0:21,0:15:15.05:0,15,208	0/0:26,0:20:33.06:0,33,427	0/1:20,16:15:99:247,0,232	0/1:16,12:18:99:293,0,165	1/1:3,3:4:9.03:127,9,0
chr10	39418191	.	A	AG	260.67	PASS	AC=24;AF=1.000;AN=24;DP=25;FS=0.000;HRun=1;HaplotypeScore=17.6729;InbreedingCoeff=-0.1544;MQ=64.76;MQ0=0;QD=13.03;VQSLOD=2.1042;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,0:2:5.99:48,6,0	./.	./.	./.	./.	./.	./.	1/1:2,0:2:2.97:20,3,0	./.	./.	1/1:1,0:1:3:25,3,0	./.	1/1:1,0:1:3:25,3,0	./.	1/1:0,2:2:2.97:20,3,0	1/1:0,1:1:2.96:19,3,0	1/1:0,1:1:2.96:19,3,0	./.	./.	./.	1/1:2,1:3:2.99:24,3,0	./.	./.	1/1:1,2:3:5.90:40,6,0	./.	1/1:1,0:1:3:25,3,0	1/1:1,0:1:2.99:24,3,0	1/1:2,0:2:5.96:44,6,0
chr10	39420444	.	C	CT	4406.64	PASS	AB=0.718;AC=25;AF=0.446;AN=56;BaseQRankSum=-12.139;DP=561;FS=1.650;HRun=11;HaplotypeScore=66.1001;InbreedingCoeff=0.8093;MQ=79.59;MQ0=1;MQRankSum=0.503;QD=17.49;ReadPosRankSum=0.404;VQSLOD=5.7234;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:80.64:0,81,624	0/0:15,0:15:32.85:0,33,255	0/0:20,0:17:20.82:0,21,118	0/1:15,1:11:0.81:26,0,1	1/1:5,13:18:15.84:342,16,0	0/1:4,16:20:1.39:351,0,1	1/1:4,11:15:4.61:301,5,0	0/0:9,0:33:48.06:0,48,140	1/1:5,10:16:41.84:391,42,0	0/0:26,0:26:59.75:0,60,464	0/0:22,0:24:58.79:0,59,445	1/1:1,12:13:6.83:251,7,0	1/1:2,25:27:63.12:638,63,0	1/1:6,7:14:20.88:197,21,0	1/1:5,15:20:27.05:274,27,0	1/1:3,13:16:30.06:305,30,0	1/1:3,19:25:40.91:419,41,0	0/0:22,0:22:59.77:0,60,464	0/0:5,0:29:54.64:0,55,187	0/0:2,0:24:38.67:0,39,112	0/0:0,0:7:14.26:0,14,41	1/1:7,7:14:21.92:209,22,0	0/1:10,11:21:31.38:339,0,31	1/1:3,14:17:36.07:365,36,0	0/0:22,0:22:56.78:0,57,441	0/0:1,0:21:38.70:0,39,111	0/0:5,0:20:25.20:0,25,74	0/0:0,0:12:24.44:0,24,71
chr10	39420935	.	AATCT	A	1587.26	PASS	AC=16;AF=0.333;AN=48;BaseQRankSum=-0.098;DP=549;FS=0.000;HRun=0;HaplotypeScore=100.9382;InbreedingCoeff=0.7881;MQ=63.23;MQ0=9;MQRankSum=1.506;QD=13.01;ReadPosRankSum=1.347;VQSLOD=2.7151;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	1/1:6,6:12:18.06:270,18,0	./.	./.	1/1:12,8:20:18.06:270,18,0	0/0:17,0:17:18.06:0,18,396	0/0:9,0:9:3.01:0,3,69	./.	1/1:8,5:13:9.03:135,9,0	0/0:20,0:33:48.08:0,48,729	0/0:27,0:26:30.10:0,30,689	0/0:13,0:20:15.05:0,15,257	0/0:21,0:21:15.05:0,15,322	0/0:19,0:19:15.05:0,15,320	1/1:11,7:18:15.05:225,15,0	1/1:4,8:13:18.05:253,18,0	1/1:16,11:27:24.08:360,24,0	1/1:7,0:11:3:28,3,0	0/0:21,0:23:27.04:0,27,412	0/0:12,0:15:3.01:0,3,52	0/0:11,0:11:9.01:0,9,140	1/1:2,6:8:14.99:225,15,0	0/0:12,0:19:20.86:0,21,365	0/0:13,0:13:6.02:0,6,77	0/0:17,0:25:3:0,3,27	0/0:26,0:32:18.03:0,18,260	0/0:23,0:23:21.05:0,21,330	0/0:13,0:13:2.98:0,3,22
chr10	39421611	.	G	GGTGTGT	3110.96	PASS	AB=0.978;AC=42;AF=0.875;AN=48;BaseQRankSum=-0.349;DP=613;FS=0.000;HRun=0;HaplotypeScore=123.8222;InbreedingCoeff=0.3884;MQ=41.78;MQ0=124;MQRankSum=-2.084;QD=6.15;ReadPosRankSum=-0.243;VQSLOD=1.5763;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:26:2.14:37,2,0	1/1:3,0:6:3.01:38,3,0	./.	./.	./.	1/1:19,0:16:6.49:88,6,0	0/1:21,0:15:0:0,0,0	1/1:24,0:10:15.02:180,15,0	1/1:18,0:15:5.93:76,6,0	1/1:20,3:21:24.95:410,25,0	1/1:17,3:17:12.04:269,12,0	0/1:20,0:11:0:1,0,0	1/1:16,0:12:6.02:121,6,0	1/1:19,0:15:2.92:64,3,0	1/1:22,0:19:12.04:196,12,0	1/1:25,0:17:5.94:42,6,0	1/1:17,0:14:0.47:1,0,0	1/1:23,5:35:26.25:675,26,0	1/1:17,0:13:9.03:178,9,0	0/1:28,0:22:0:0,0,0	1/1:36,0:29:12.01:168,12,0	1/1:17,0:14:3.01:66,3,0	./.	0/1:21,0:17:0:0,0,0	0/0:18,0:17:14.26:0,14,250	1/1:24,0:12:6.02:120,6,0	1/1:21,0:21:14.73:400,15,0	1/1:11,0:11:3.01:78,3,0
chr10	39422257	.	C	CT	20749.54	PASS	AB=0.839;AC=54;AF=0.964;AN=56;BaseQRankSum=2.270;DP=716;FS=2.951;HRun=2;HaplotypeScore=199.0868;InbreedingCoeff=-0.0367;MQ=72.50;MQ0=0;MQRankSum=-7.746;QD=28.98;ReadPosRankSum=2.938;VQSLOD=4.3983;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,7:22:53.83:582,54,0	1/1:7,5:12:35.80:360,36,0	0/1:16,2:18:87.38:87,0,189	0/1:10,4:14:35.21:35,0,121	1/1:15,14:27:70.74:652,71,0	1/1:18,7:25:65.72:668,66,0	1/1:11,6:17:50.70:534,51,0	1/1:20,25:45:99:1345,129,0	1/1:13,6:19:56.55:592,57,0	1/1:20,7:27:74.58:870,75,0	1/1:19,9:28:80.37:830,80,0	1/1:23,11:34:98.66:1059,99,0	1/1:25,8:33:98.51:1061,99,0	1/1:17,11:28:82.96:846,83,0	1/1:26,17:43:99:1297,127,0	1/1:18,6:24:71.97:829,72,0	1/1:17,3:20:56.88:648,57,0	1/1:14,8:22:65.91:700,66,0	1/1:6,15:21:63.03:676,63,0	1/1:26,6:32:95.89:1082,96,0	1/1:18,5:23:59.34:619,59,0	1/1:21,9:30:88.87:934,89,0	1/1:16,10:26:68.45:687,68,0	1/1:12,5:17:44.57:465,45,0	1/1:24,6:30:86.92:996,87,0	1/1:15,8:23:66.02:769,66,0	1/1:20,15:34:99:947,101,0	1/1:13,6:19:56.91:580,57,0
chr10	39422260	.	TC	T	15398.41	PASS	AB=0.900;AC=53;AF=0.946;AN=56;BaseQRankSum=2.475;DP=714;FS=4.175;HRun=3;HaplotypeScore=220.0379;InbreedingCoeff=0.6462;MQ=71.97;MQ0=0;MQRankSum=-7.781;QD=21.97;ReadPosRankSum=3.603;VQSLOD=4.1240;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:16,7:23:55.06:467,55,0	1/1:6,5:11:31.76:252,32,0	0/1:16,2:18:29.21:29,0,217	0/0:12,1:13:23.74:0,24,161	1/1:15,14:28:65.71:498,66,0	1/1:16,7:23:63.22:505,63,0	1/1:12,5:17:44.97:363,45,0	1/1:17,24:41:99:868,111,0	1/1:13,5:18:50.60:413,51,0	1/1:20,7:27:73.54:710,74,0	1/1:17,9:26:73.42:603,73,0	1/1:26,10:36:99:873,102,0	1/1:28,7:35:92.89:788,93,0	1/1:20,10:30:80.14:661,80,0	1/1:24,16:40:99:891,111,0	1/1:20,5:25:70.92:651,71,0	1/1:18,2:20:52.98:493,53,0	1/1:15,8:23:61.16:489,61,0	1/1:9,12:21:59:455,59,0	1/1:26,7:33:90.47:810,90,0	1/1:17,6:23:61.57:535,62,0	1/1:24,8:32:83.71:705,84,0	1/1:18,9:27:66.02:549,66,0	1/1:13,4:17:41.89:356,42,0	1/1:22,6:28:79.15:721,79,0	1/1:18,6:24:64.90:585,65,0	1/1:18,17:35:96.77:696,97,0	1/1:13,6:19:55.41:432,55,0
chr10	39423383	.	T	TA	255.17	PASS	AB=0.830;AC=11;AF=0.196;AN=56;BaseQRankSum=7.299;DP=249;FS=3.437;HRun=0;HaplotypeScore=33.3992;InbreedingCoeff=-0.2677;MQ=48.22;MQ0=0;MQRankSum=-4.448;QD=2.34;ReadPosRankSum=-4.448;VQSLOD=0.3649;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:24.03:0,24,311	0/1:4,1:5:20.67:21,0,151	0/0:4,0:3:8.95:0,9,84	0/0:3,0:3:5.17:0,5,21	0/0:13,0:13:39.13:0,39,543	0/1:6,2:8:47.01:47,0,226	0/1:3,2:5:50.38:50,0,110	0/0:20,0:20:54.16:0,54,721	0/0:4,0:4:12.04:0,12,167	0/0:8,0:8:24.04:0,24,300	0/0:9,0:9:27.09:0,27,375	0/1:3,2:5:57.23:57,0,110	0/1:8,1:9:4.85:5,0,275	0/1:8,1:9:9.26:9,0,307	0/1:6,1:7:15.28:15,0,229	0/0:6,0:6:18.03:0,18,230	0/0:10,0:10:24.08:0,24,334	0/1:8,1:9:19.73:20,0,190	0/0:13,1:14:1.98:0,2,434	0/1:12,2:14:16.46:16,0,459	0/0:5,0:5:15.04:0,15,194	0/0:3,0:3:9.03:0,9,125	0/0:4,0:4:12.04:0,12,167	0/0:4,0:4:12.04:0,12,167	0/1:19,6:25:99:116,0,704	0/0:11,0:11:33.11:0,33,460	0/0:12,1:13:5.89:0,6,426	0/1:10,3:13:39.74:40,0,341
chr10	39423387	.	ATG	A	179.17	PASS	AB=0.844;AC=13;AF=0.232;AN=56;BaseQRankSum=7.457;DP=230;FS=6.502;HRun=0;HaplotypeScore=34.3015;InbreedingCoeff=-0.2187;MQ=44.65;MQ0=0;MQRankSum=-2.066;QD=1.53;ReadPosRankSum=-2.880;VQSLOD=-0.6313;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:8:21.07:0,21,384	0/1:4,1:5:12.17:12,0,214	0/0:4,0:3:9.01:0,9,137	0/1:1,0:2:0:0,0,0	0/0:12,0:12:36.11:0,36,651	0/1:5,2:7:34.19:34,0,266	0/1:3,2:5:42.85:43,0,123	0/0:16,0:16:45.15:0,45,861	0/0:4,0:4:12.02:0,12,197	0/0:7,0:7:21.07:0,21,384	0/0:9,0:9:27.09:0,27,514	0/1:3,2:5:39.58:40,0,159	0/1:6,1:7:16.03:16,0,215	0/1:8,1:9:0.49:0,0,421	0/1:6,1:7:6.48:6,0,324	0/0:6,0:6:18.05:0,18,307	0/0:10,0:10:24.08:0,24,431	0/1:7,1:8:15:15,0,216	0/1:12,1:13:1.16:1,0,568	0/1:12,2:14:14.45:14,0,641	0/0:3,0:3:9.03:0,9,153	0/0:3,0:3:9.03:0,9,172	0/0:4,0:4:12.04:0,12,230	0/0:4,0:4:11.93:0,12,189	0/1:18,6:24:93.61:94,0,911	0/0:10,0:10:30.10:0,30,577	0/0:12,1:13:6.25:0,6,603	0/1:8,3:11:39.58:40,0,428
chr10	39425066	.	GA	G	13070.77	PASS	AB=0.759;AC=52;AF=0.929;AN=56;BaseQRankSum=-2.962;DP=678;FS=0.000;HRun=10;HaplotypeScore=82.1555;InbreedingCoeff=0.5390;MQ=72.66;MQ0=0;MQRankSum=-3.920;QD=19.71;ReadPosRankSum=3.903;VQSLOD=5.4996;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,47:51:99:1068,123,0	1/1:2,5:7:14.99:129,15,0	0/0:15,0:13:20.26:0,20,192	0/1:18,1:19:3.86:4,0,188	1/1:8,19:27:53.88:462,54,0	0/1:5,16:21:12.37:363,0,12	1/1:3,18:22:19.82:390,20,0	1/1:5,25:30:44.72:604,45,0	1/1:4,19:23:20.80:410,21,0	1/1:4,23:27:65.98:573,66,0	1/1:1,19:20:50.98:443,51,0	1/1:2,15:17:8.81:305,9,0	1/1:3,22:25:53.98:469,54,0	1/1:4,23:27:59.98:521,60,0	1/1:5,29:34:62.98:547,63,0	1/1:6,24:30:68.98:599,69,0	1/1:7,31:38:89.97:781,90,0	1/1:2,19:20:47.99:417,48,0	1/1:1,18:19:56.99:494,57,0	1/1:5,24:29:62.95:547,63,0	1/1:1,30:31:86.98:755,87,0	1/1:1,10:11:26.99:234,27,0	1/1:4,23:27:62.98:547,63,0	1/1:0,23:23:65.99:573,66,0	1/1:0,15:15:41.99:365,42,0	1/1:2,23:25:71.93:616,72,0	1/1:2,35:38:61.88:753,62,0	1/1:2,4:6:12:104,12,0
chr10	39425222	.	TC	T	20614.25	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-5.397;DP=725;FS=16.662;HRun=5;HaplotypeScore=74.7893;InbreedingCoeff=0.9840;MQ=83.24;MQ0=0;MQRankSum=-11.318;QD=30.58;ReadPosRankSum=6.758;VQSLOD=3.1282;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,33:36:93.27:1055,93,0	1/1:2,4:6:12.03:136,12,0	0/0:28,0:28:72.35:0,72,949	0/0:23,0:23:62.56:0,63,804	1/1:1,33:34:87.25:987,87,0	1/1:0,22:22:60.17:681,60,0	1/1:1,16:17:42.12:476,42,0	1/1:4,36:40:99:1224,108,0	1/1:0,31:31:93.27:1055,93,0	1/1:2,18:20:54.15:612,54,0	1/1:1,15:16:42.12:476,42,0	1/1:2,23:25:66.19:747,66,0	1/1:5,25:30:72.20:815,72,0	1/1:2,23:25:69.20:781,69,0	1/1:3,30:32:90.26:1021,90,0	1/1:0,39:39:99:1327,117,0	1/1:0,37:37:99:1225,108,0	1/1:0,13:13:39.11:442,39,0	1/1:0,10:10:30.09:340,30,0	1/1:3,31:34:84.24:953,84,0	1/1:3,22:25:66.19:749,66,0	1/1:2,31:33:84.24:953,84,0	1/1:1,30:31:81.23:919,81,0	1/1:0,13:13:39.11:442,39,0	1/1:0,21:21:54.15:612,54,0	1/1:0,30:30:90.26:1021,90,0	1/1:2,38:40:99:1123,99,0	1/1:0,13:13:39.11:442,39,0
chr10	39425999	.	TA	T	4564.53	PASS	AB=0.988;AC=46;AF=0.821;AN=56;BaseQRankSum=-5.500;DP=707;FS=5.821;HRun=1;HaplotypeScore=137.4842;InbreedingCoeff=-0.1471;MQ=75.58;MQ0=0;MQRankSum=-2.843;QD=6.46;ReadPosRankSum=11.268;VQSLOD=0.6461;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:25,1:26:4.23:163,0,4	1/1:14,0:14:29.47:98,29,0	0/1:10,0:9:3.77:4,0,106	0/1:16,1:17:23.83:52,0,24	1/1:35,0:35:54.96:279,55,0	1/1:25,0:25:56.18:201,56,0	0/1:19,0:19:47.29:58,0,47	0/1:29,1:30:26.44:118,0,26	1/1:27,1:28:20.61:194,21,0	1/1:26,0:26:26.95:187,27,0	1/1:26,1:27:12.25:193,12,0	1/1:24,0:24:34.64:174,35,0	1/1:16,1:17:16.25:124,16,0	1/1:24,0:24:10.31:159,10,0	0/1:45,0:45:18.33:215,0,18	0/1:31,0:30:24.52:139,0,25	1/1:34,0:34:57.93:268,58,0	1/1:14,0:14:5.95:73,6,0	0/1:22,0:22:7.42:87,0,7	1/1:43,1:44:51.40:363,51,0	1/1:22,0:22:4.10:112,4,0	1/1:29,0:28:16.95:217,17,0	1/1:28,0:28:63.79:281,64,0	0/1:25,0:25:8.71:122,0,9	1/1:26,1:27:15.03:200,15,0	0/1:24,0:24:2.09:123,0,2	1/1:19,0:19:43.57:178,44,0	1/1:21,0:21:50.72:184,51,0
chr10	39426802	.	T	TC	18521.13	PASS	AC=52;AF=0.963;AN=54;BaseQRankSum=-2.741;DP=777;FS=1.728;HRun=3;HaplotypeScore=50.6510;InbreedingCoeff=0.8948;MQ=51.42;MQ0=30;MQRankSum=-3.849;QD=26.12;ReadPosRankSum=2.000;VQSLOD=4.1934;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,48:48:99:1741,126,0	1/1:1,7:5:12.04:168,12,0	0/0:43,0:6:15.05:0,15,180	./.	1/1:2,38:29:69.23:966,69,0	1/1:0,29:21:57.19:798,57,0	1/1:3,18:8:21.07:294,21,0	1/1:3,19:6:9.02:104,9,0	1/1:1,20:13:36.12:503,36,0	1/1:0,31:21:57.17:764,57,0	1/1:2,25:20:54.18:755,54,0	1/1:0,25:19:51.17:714,51,0	1/1:0,33:25:72.24:1006,72,0	1/1:2,43:37:93.27:1279,93,0	1/1:0,43:29:78.26:1091,78,0	1/1:0,27:21:57.19:798,57,0	1/1:2,27:25:63.18:861,63,0	1/1:3,17:17:36.12:500,36,0	1/1:3,11:7:21.05:270,21,0	1/1:4,26:19:42.14:588,42,0	1/1:2,19:20:48.16:672,48,0	1/1:0,24:16:45.15:630,45,0	1/1:2,21:19:41.64:586,42,0	1/1:1,25:23:63.21:882,63,0	1/1:2,26:17:42.14:588,42,0	1/1:1,31:22:63.19:863,63,0	1/1:3,21:19:51.16:682,51,0	1/1:1,11:12:30.10:420,30,0
chr10	39427376	.	C	CA	5855.43	PASS	AB=0.947;AC=27;AF=0.482;AN=56;BaseQRankSum=-15.983;DP=704;FS=3.891;HRun=12;HaplotypeScore=110.5900;InbreedingCoeff=0.8982;MQ=72.43;MQ0=0;MQRankSum=3.087;QD=15.91;ReadPosRankSum=-2.045;VQSLOD=4.2842;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:3,0:38:63.14:0,63,183	0/0:2,0:19:28.51:0,29,82	0/0:19,0:16:13.50:0,13,79	0/1:17,1:16:10.55:11,0,73	1/1:6,28:34:52.96:628,53,0	1/1:2,16:19:19.95:334,20,0	1/1:2,17:20:16.32:349,16,0	0/0:3,0:27:42.28:0,42,123	1/1:5,20:25:14.15:299,14,0	0/0:6,0:24:33.82:0,34,97	0/0:2,0:16:24.65:0,25,85	1/1:2,24:26:44.31:586,44,0	1/1:5,27:32:54.09:526,54,0	1/1:8,16:25:2.13:183,2,0	1/1:9,23:33:57.09:552,57,0	1/1:6,21:28:37.35:556,37,0	1/1:4,29:34:44.02:572,44,0	0/0:1,0:23:40.74:0,41,118	0/0:3,0:26:46.62:0,47,136	0/0:4,0:26:40.72:0,41,119	0/0:3,0:22:30.54:0,31,90	1/1:3,18:21:39.06:380,39,0	1/1:7,16:24:29.03:422,29,0	1/1:6,22:29:32.01:459,32,0	0/0:26,0:26:61.62:0,62,442	0/0:2,0:23:40.73:0,41,119	0/0:5,0:28:36.66:0,37,108	0/0:1,0:17:32.59:0,33,96
chr10	39479691	.	GAGCCTGTC	G	19389.11	PASS	AB=1.000;AC=49;AF=0.942;AN=52;BaseQRankSum=-0.966;DP=493;FS=1.197;HRun=0;HaplotypeScore=146.8397;InbreedingCoeff=0.6210;MQ=59.41;MQ0=0;MQRankSum=-4.948;QD=41.43;ReadPosRankSum=3.040;VQSLOD=4.8123;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,24:35:45.09:1109,45,0	1/1:1,11:12:27.01:651,27,0	0/0:8,0:8:18.06:0,18,715	0/1:7,0:7:3.01:3,0,332	./.	1/1:0,10:10:21.07:536,21,0	1/1:9,27:36:57.20:1512,57,0	1/1:4,4:8:10.28:272,10,0	1/1:5,15:20:30.57:802,31,0	1/1:6,12:18:33.08:716,33,0	./.	1/1:2,20:22:51.18:1313,51,0	1/1:4,13:17:33.11:854,33,0	1/1:3,27:30:72.25:1870,72,0	1/1:0,19:19:51.18:1356,51,0	1/1:0,10:10:30.10:801,30,0	1/1:9,18:27:42.14:1094,42,0	1/1:5,16:21:39.13:1041,39,0	1/1:0,8:8:24.08:640,24,0	1/1:3,6:9:6.02:154,6,0	1/1:21,25:46:23.93:562,24,0	1/1:3,4:7:2.60:80,3,0	1/1:2,9:11:12.04:291,12,0	1/1:8,25:33:27.09:671,27,0	1/1:2,13:15:24.08:614,24,0	1/1:6,13:19:39.11:943,39,0	1/1:2,15:17:36.12:947,36,0	1/1:3,8:11:21.07:560,21,0
chr10	39479814	.	T	TC	1569.42	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.460;DP=640;FS=1.222;HRun=6;HaplotypeScore=78.2989;InbreedingCoeff=0.9928;MQ=80.97;MQ0=0;MQRankSum=-0.731;QD=30.77;ReadPosRankSum=1.361;VQSLOD=4.1851;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:39:96.18:0,96,970	0/0:10,0:10:21.04:0,21,214	0/0:22,0:22:41.63:0,42,386	0/0:17,0:16:23.21:0,23,281	0/0:16,0:16:47.90:0,48,456	0/0:18,0:18:48.11:0,48,489	0/0:27,0:27:60.12:0,60,611	0/0:14,0:14:36.08:0,36,367	0/0:17,0:17:45.10:0,45,459	0/0:23,0:23:60.12:0,60,607	0/0:10,0:10:27.06:0,27,275	0/0:31,0:31:78.13:0,78,786	1/1:1,20:21:57.18:715,57,0	1/1:2,28:30:78.25:976,78,0	0/0:26,0:26:66.14:0,66,673	0/0:20,0:20:54.12:0,54,551	0/0:42,0:42:99:0,120,1213	0/0:37,0:36:99:0,99,1001	0/0:13,0:13:24.05:0,24,244	0/0:15,0:15:45.10:0,45,459	0/0:54,0:54:99:0,117,1184	0/0:21,0:21:60.10:0,60,593	0/0:9,0:9:21.04:0,21,214	0/0:26,0:26:69.16:0,69,703	0/0:15,0:15:42.10:0,42,428	0/0:31,0:31:81.16:0,81,816	0/0:22,0:22:60.12:0,60,603	0/0:13,0:13:36.08:0,36,367
chr10	39480376	.	TG	T	4817.34	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=11.657;DP=675;FS=4.951;HRun=2;HaplotypeScore=64.6821;InbreedingCoeff=0.9951;MQ=84.00;MQ0=0;MQRankSum=-6.679;QD=34.91;ReadPosRankSum=2.762;VQSLOD=5.3951;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,42:43:99:1558,120,0	1/1:0,6:6:15.05:195,15,0	0/0:24,0:24:60.23:0,60,985	0/0:21,0:21:63.17:0,63,888	0/0:22,0:22:57.19:0,57,853	0/0:17,0:17:48.16:0,48,717	0/0:39,0:39:99:0,117,1728	0/0:28,0:28:78.25:0,78,1148	0/0:27,0:27:81.26:0,81,1189	1/1:2,26:28:75.23:961,75,0	1/1:0,16:16:39.11:506,39,0	0/0:32,0:32:96.33:0,96,1438	0/0:25,0:25:75.25:0,75,1120	0/0:20,0:20:57.17:0,57,822	0/0:29,0:29:87.29:0,87,1300	0/0:21,0:21:63.21:0,63,944	0/0:33,0:33:96.28:0,96,1386	1/1:1,29:30:81.26:1052,81,0	0/0:19,0:19:54.17:0,54,782	0/0:16,0:16:45.15:0,45,671	0/0:61,0:61:99:0,181,2692	0/0:14,0:14:39.13:0,39,582	0/0:13,0:13:39.13:0,39,582	0/0:27,0:27:78.24:0,78,1127	1/1:0,15:15:42.14:545,42,0	0/0:17,0:16:50.38:0,50,727	0/0:26,0:25:78.25:0,78,1147	0/0:6,0:6:18.06:0,18,263
chr10	39480851	.	T	TG	626.34	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=2.438;DP=478;FS=0.883;HRun=5;HaplotypeScore=46.3730;InbreedingCoeff=0.8442;MQ=77.01;MQ0=0;MQRankSum=1.390;QD=28.47;ReadPosRankSum=-0.134;VQSLOD=3.3393;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:93.21:0,93,990	0/0:5,0:5:12.03:0,12,129	0/0:12,0:12:36.09:0,36,381	0/0:8,0:8:4.78:0,5,105	0/0:6,0:6:15.04:0,15,161	0/0:10,0:10:30.08:0,30,322	0/0:20,0:20:60.13:0,60,636	0/0:30,0:30:87.19:0,87,917	0/0:16,0:16:42.10:0,42,451	0/0:15,0:15:42.11:0,42,452	0/0:10,0:10:27.07:0,27,290	0/0:25,0:25:69.16:0,69,733	1/1:0,8:8:21.07:276,21,0	1/1:2,11:14:36.12:470,36,0	0/0:13,0:13:36.09:0,36,387	0/0:16,0:16:42.11:0,42,451	0/0:34,0:34:99:0,99,1064	0/0:26,0:25:72.14:0,72,761	0/0:15,0:14:33.08:0,33,355	0/0:12,0:12:33.07:0,33,345	0/0:63,0:63:99:0,159,1689	0/0:14,0:14:42.11:0,42,451	0/0:2,0:2:6.02:0,6,64	0/0:23,0:23:63.16:0,63,677	0/0:12,0:12:33.07:0,33,347	0/0:20,0:20:57.14:0,57,613	0/0:11,0:11:33.08:0,33,355	0/0:3,0:3:9.02:0,9,97
chr10	39481329	.	T	TA	599.70	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=0.641;DP=334;FS=4.601;HRun=2;HaplotypeScore=33.9132;InbreedingCoeff=0.8265;MQ=84.34;MQ0=0;MQRankSum=-0.210;QD=28.56;ReadPosRankSum=0.420;VQSLOD=3.0548;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:45.15:0,45,584	0/0:3,0:3:9.02:0,9,102	0/0:8,0:8:24.07:0,24,288	0/0:14,0:14:34.82:0,35,425	0/0:6,0:6:18.06:0,18,233	0/0:8,0:8:24.08:0,24,312	0/0:28,0:28:81.26:0,81,1052	0/0:16,0:16:45.15:0,45,583	0/0:11,0:11:33.11:0,33,426	0/0:6,0:6:18.06:0,18,234	0/0:6,0:6:15.05:0,15,195	0/0:13,0:13:39.09:0,39,476	1/1:1,10:11:27.09:405,27,0	1/1:1,9:10:21.07:315,21,0	0/0:7,0:7:21.07:0,21,272	0/0:13,0:13:36.12:0,36,467	0/0:35,0:35:99:0,105,1314	0/0:41,0:41:99:0,117,1499	0/0:12,0:12:36.10:0,36,443	0/0:5,0:5:9.03:0,9,117	0/0:23,0:23:69.22:0,69,895	0/0:4,0:4:12.04:0,12,156	0/0:4,0:4:12.04:0,12,151	0/0:14,0:14:33.11:0,33,428	0/0:2,0:2:6.02:0,6,78	0/0:7,0:7:21.07:0,21,272	0/0:8,0:8:24.06:0,24,295	0/0:3,0:3:9.03:0,9,115
chr10	39481648	.	TAG	T	4400.97	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=7.729;DP=380;FS=47.996;HRun=0;HaplotypeScore=65.1578;InbreedingCoeff=0.8470;MQ=81.13;MQ0=0;MQRankSum=-0.632;QD=24.72;ReadPosRankSum=9.857;VQSLOD=2.5223;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,27:28:63.05:904,63,0	1/1:0,8:8:21.07:327,21,0	0/1:13,0:11:26.12:26,0,84	0/0:20,0:17:5.36:0,5,221	0/0:10,0:10:29.95:0,30,262	1/1:11,0:11:23.97:199,24,0	1/1:12,4:24:41.69:390,42,0	0/0:12,0:12:35.89:0,36,324	0/0:11,0:11:26.93:0,27,218	1/1:0,16:17:51.11:685,51,0	1/1:0,6:7:6.89:98,7,0	1/1:11,0:11:17.92:144,18,0	0/0:19,0:19:47.28:0,47,428	0/0:13,0:13:17.91:0,18,145	0/0:11,0:11:29.90:0,30,240	0/0:10,1:11:23.97:0,24,200	0/0:18,0:18:49.99:0,50,384	1/1:0,34:34:84.23:1312,84,0	0/0:8,0:8:20.97:0,21,192	0/0:4,0:4:11.97:0,12,97	0/0:27,0:29:67.81:0,68,555	0/0:8,0:8:20.95:0,21,169	0/0:0,0:8:0.47:0,0,1	1/1:18,0:19:13.96:126,14,0	1/1:0,6:6:12.04:191,12,0	0/0:7,0:7:20.99:0,21,182	0/0:8,0:8:14.70:0,15,138	0/0:5,0:5:12.01:0,12,147
chr10	39482474	.	AG	A	2250.18	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=13.272;DP=870;FS=2.054;HRun=6;HaplotypeScore=93.9301;InbreedingCoeff=0.9976;MQ=87.25;MQ0=0;MQRankSum=-1.457;QD=27.78;ReadPosRankSum=3.722;VQSLOD=4.0152;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,111,1354	0/0:8,0:8:21.07:0,21,276	0/0:36,0:36:75.65:0,76,925	0/0:25,0:25:57.33:0,57,707	0/0:17,0:17:42.14:0,42,553	0/0:19,0:19:54.17:0,54,696	0/0:28,0:28:81.26:0,81,1065	0/0:37,0:37:93.28:0,93,1183	0/0:29,0:29:87.28:0,87,1142	0/0:32,0:32:90.28:0,90,1160	0/0:19,0:19:51.17:0,51,668	0/0:31,0:31:84.27:0,84,1103	1/1:1,42:43:99:1247,117,0	1/1:0,38:38:99:1125,105,0	0/0:48,0:48:99:0,132,1703	0/0:24,0:24:69.20:0,69,879	0/0:45,0:45:99:0,123,1596	0/0:31,0:31:90.22:0,90,1133	0/0:21,0:21:57.19:0,57,749	0/0:26,0:26:72.23:0,72,947	0/0:77,0:77:99:0,220,2861	0/0:31,0:31:90.26:0,90,1149	0/0:22,0:22:57.18:0,57,743	0/0:41,0:41:99:0,108,1392	0/0:27,0:27:78.23:0,78,1010	0/0:40,0:40:99:0,114,1499	0/0:24,0:24:60.20:0,60,788	0/0:11,0:11:30.10:0,30,395
chr10	39484163	.	AC	A	10771.11	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=14.466;DP=774;FS=7.085;HRun=2;HaplotypeScore=76.3855;InbreedingCoeff=0.9996;MQ=90.15;MQ0=0;MQRankSum=-2.876;QD=35.78;ReadPosRankSum=3.643;VQSLOD=5.3946;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,52:54:99:1943,150,0	1/1:0,14:14:39.13:506,39,0	0/0:33,0:33:90.24:0,90,1299	0/0:26,0:26:75.13:0,75,990	0/0:23,0:23:66.21:0,66,968	1/1:2,25:27:75.24:973,75,0	1/1:0,34:34:99:1285,99,0	0/0:41,0:41:99:0,120,1762	0/0:23,0:23:66.22:0,66,989	1/1:0,19:19:57.17:727,57,0	1/1:0,9:9:24.08:312,24,0	1/1:0,42:42:99:1519,117,0	0/0:38,0:38:99:0,114,1704	0/0:29,0:29:87.10:0,87,1233	0/0:29,0:29:87.29:0,87,1304	0/0:29,0:29:87.29:0,87,1299	0/0:26,0:26:75.25:0,75,1124	1/1:1,12:13:33.11:429,33,0	0/0:21,0:21:63.20:0,63,924	0/0:20,0:20:60.20:0,60,898	0/0:47,0:47:99:0,138,2019	0/0:23,0:23:66.22:0,66,989	1/1:0,18:18:42.09:545,42,0	1/1:1,43:44:99:1519,117,0	1/1:0,27:27:78.25:1013,78,0	0/0:24,0:24:69.22:0,69,1013	0/0:27,0:26:81.26:0,81,1193	0/0:14,0:14:39.08:0,39,535
chr10	39486275	.	G	GA	8458.11	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-9.601;DP=589;FS=1.023;HRun=7;HaplotypeScore=61.9670;InbreedingCoeff=0.9911;MQ=83.03;MQ0=0;MQRankSum=-4.167;QD=29.99;ReadPosRankSum=1.842;VQSLOD=5.3524;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,41:44:99:1413,117,0	1/1:2,10:12:36.09:413,36,0	0/0:19,0:19:51.07:0,51,488	0/0:16,0:16:8.86:0,9,260	0/0:19,0:19:53.98:0,54,508	1/1:2,28:30:78.24:943,78,0	1/1:2,34:36:90.28:1087,90,0	0/0:19,0:19:51.08:0,51,492	0/0:13,0:13:36.06:0,36,348	1/1:4,21:25:66.20:788,66,0	1/1:3,14:17:39.08:455,39,0	1/1:2,23:25:60.17:713,60,0	1/1:1,11:12:30.09:358,30,0	1/1:2,16:18:39.12:471,39,0	0/0:24,0:24:66.08:0,66,630	0/0:17,0:17:45.07:0,45,435	0/0:28,0:28:75.08:0,75,711	1/1:2,13:15:39.12:471,39,0	0/0:15,0:15:45.07:0,45,435	0/0:22,0:22:60.08:0,60,573	0/0:24,0:24:63.09:0,63,608	0/0:25,0:25:66.10:0,66,637	1/1:2,16:18:45.14:543,45,0	1/1:1,10:11:21.06:254,21,0	1/1:8,11:19:48.12:548,48,0	0/0:19,0:19:51.08:0,51,492	0/0:26,0:26:66.02:0,66,615	0/0:21,0:21:63.06:0,63,600
chr10	39486349	.	G	GT	3186.43	PASS	AB=0.633;AC=11;AF=0.196;AN=56;BaseQRankSum=-10.085;DP=576;FS=5.435;HRun=10;HaplotypeScore=87.1277;InbreedingCoeff=0.8470;MQ=64.94;MQ0=1;MQRankSum=0.806;QD=21.82;ReadPosRankSum=0.660;VQSLOD=4.3310;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:13,27:40:93.21:981,93,0	1/1:5,3:8:15.02:152,15,0	0/0:16,0:9:17.71:0,18,148	0/0:8,0:8:11.65:0,12,75	0/0:24,0:24:45.05:0,45,474	0/0:22,0:22:50.93:0,51,419	0/0:25,0:26:73.15:0,73,575	0/0:25,1:27:20.16:0,20,344	0/0:17,0:17:47.90:0,48,388	1/1:14,20:35:78.89:790,79,0	0/1:8,11:19:7.17:342,0,7	0/0:19,1:20:20.70:0,21,343	0/0:19,0:19:47.94:0,48,394	0/0:16,0:16:32.89:0,33,262	0/0:15,0:15:35.95:0,36,294	0/0:17,0:17:38.94:0,39,319	0/0:27,0:27:71.91:0,72,591	1/1:2,19:21:57.12:596,57,0	0/0:16,1:17:12.96:0,13,313	0/0:20,0:21:52.96:0,53,424	0/0:21,0:21:47.93:0,48,394	0/0:13,0:13:35.94:0,36,293	0/0:12,0:12:32:0,32,252	0/0:28,0:28:73.73:0,74,596	1/1:3,19:23:29.44:502,29,0	0/0:22,2:24:1.95:0,2,429	0/0:25,0:25:71.90:0,72,590	0/0:12,0:13:22.97:0,23,178
chr10	39486787	.	T	TC	453.59	PASS	AB=0.726;AC=4;AF=0.071;AN=56;BaseQRankSum=-0.666;DP=532;FS=3.084;HRun=8;HaplotypeScore=62.2179;InbreedingCoeff=0.5692;MQ=82.90;MQ0=0;MQRankSum=-0.472;QD=7.56;ReadPosRankSum=-0.215;VQSLOD=0.8238;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:92.85:0,93,842	0/0:14,0:14:29.96:0,30,264	0/0:26,0:25:47.64:0,48,414	0/0:21,0:16:26.65:0,27,219	0/0:17,0:17:39:0,39,357	0/0:17,0:15:39.01:0,39,357	0/1:25,2:27:0.21:0,0,507	0/0:17,0:17:17.96:0,18,165	0/0:15,0:15:42.02:0,42,384	0/0:15,0:15:29.99:0,30,274	0/0:11,0:11:24:0,24,219	0/0:22,0:22:47.95:0,48,438	1/1:3,18:21:33.09:372,33,0	0/1:1,11:12:6.39:187,0,6	0/0:18,0:18:41.95:0,42,370	0/0:16,0:16:45.02:0,45,411	0/0:14,0:14:36.01:0,36,329	0/0:16,1:17:32.84:0,33,301	0/0:25,0:25:54:0,54,493	0/0:6,0:6:8.99:0,9,82	0/0:41,0:41:62.96:0,63,718	0/0:12,0:12:20.98:0,21,186	0/0:18,0:18:37.79:0,38,324	0/0:19,0:19:42.01:0,42,384	0/0:16,0:16:29.98:0,30,270	0/0:24,0:24:51.01:0,51,467	0/0:28,0:28:74.95:0,75,675	0/0:6,0:6:8.98:0,9,78
chr10	39488720	.	CG	C	1260.93	PASS	AB=0.845;AC=30;AF=0.556;AN=54;BaseQRankSum=-3.678;DP=402;FS=34.032;HRun=11;HaplotypeScore=65.5593;InbreedingCoeff=0.4940;MQ=87.54;MQ0=6;MQRankSum=-0.464;QD=4.64;ReadPosRankSum=6.225;VQSLOD=-0.4555;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:5.83:0,6,34	0/0:1,0:1:0:0,0,0	0/0:42,1:25:35.87:0,36,320	0/1:38,0:22:17.07:17,0,103	1/1:11,0:11:0.45:1,0,0	1/1:6,0:20:22.40:64,22,0	1/1:4,0:9:14.51:42,15,0	1/1:13,4:18:4.93:92,5,0	0/0:8,0:9:11.99:0,12,106	0/0:7,0:7:2.94:0,3,18	./.	1/1:5,0:16:12.21:35,12,0	1/1:10,2:12:13.94:101,14,0	1/1:9,2:11:14.95:121,15,0	0/0:12,0:13:11.11:0,11,119	1/1:9,12:21:23.93:197,24,0	0/0:8,0:8:8.89:0,9,79	0/0:10,0:10:11.72:0,12,69	0/1:10,1:12:22.11:22,0,24	0/1:11,6:16:9.83:27,0,10	1/1:5,13:19:28.99:227,29,0	0/0:7,0:7:2.88:0,3,15	1/1:1,0:6:6.10:18,6,0	1/1:4,0:18:24.44:70,24,0	0/0:12,0:12:2.99:0,3,24	1/1:11,7:18:20.75:171,21,0	1/1:6,8:14:20.94:172,21,0	0/1:8,3:11:20:62,0,20
chr10	39488737	.	GGAGAGAGAGACA	G	436.19	PASS	AB=1.000;AC=7;AF=0.130;AN=54;BaseQRankSum=3.412;DP=367;FS=4.776;HRun=0;HaplotypeScore=122.8739;InbreedingCoeff=0.5943;MQ=71.86;MQ0=9;MQRankSum=-1.776;QD=17.45;ReadPosRankSum=-1.302;VQSLOD=2.1481;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:5,0:5:6:128,6,0	./.	0/0:40,0:15:2.92:0,3,17	0/0:46,0:20:5.41:0,5,140	0/0:7,0:7:18.05:0,18,781	0/0:19,0:19:21.04:0,21,868	0/0:11,0:12:24.08:0,24,1028	0/0:23,0:23:42.14:0,42,1605	0/0:7,0:7:12.04:0,12,567	1/1:2,6:8:9.03:212,9,0	1/1:0,4:4:5.98:112,6,0	0/0:12,0:12:21.07:0,21,1098	0/0:13,0:13:27.09:0,27,1416	0/0:7,0:7:12.04:0,12,667	0/0:9,0:9:15.03:0,15,628	0/0:14,0:14:15.05:0,15,872	0/0:9,0:9:21.07:0,21,1002	0/1:8,0:8:28.73:111,0,29	0/0:12,0:12:21.06:0,21,1080	0/0:12,0:11:17.80:0,18,798	0/0:18,0:18:30.08:0,30,1361	0/0:5,0:5:9.03:0,9,406	0/0:11,0:11:21.06:0,21,1006	0/0:16,0:15:24.08:0,24,1388	0/0:6,0:6:6.02:0,6,294	0/0:20,0:20:39.13:0,39,2164	0/0:17,0:17:33.11:0,33,1743	0/0:6,0:6:15.05:0,15,760
chr10	39503660	.	T	TA	7427.77	PASS	AB=0.950;AC=53;AF=0.946;AN=56;BaseQRankSum=7.721;DP=467;FS=2.304;HRun=1;HaplotypeScore=282.5900;InbreedingCoeff=0.5787;MQ=63.74;MQ0=0;MQRankSum=-9.367;QD=16.58;ReadPosRankSum=5.427;VQSLOD=4.6633;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,23:23:49.93:322,50,0	1/1:0,9:9:22.26:142,22,0	0/0:18,0:19:16.97:0,17,542	0/1:17,1:19:39.42:39,0,361	1/1:2,20:21:31.83:201,32,0	1/1:0,16:16:41.31:283,41,0	1/1:0,13:13:38.16:276,38,0	1/1:0,27:28:74.90:619,75,0	1/1:0,18:18:43.26:280,43,0	1/1:0,21:20:59.82:486,60,0	1/1:0,11:11:17.17:86,17,0	1/1:0,18:18:49.21:337,49,0	1/1:0,22:22:61.13:390,61,0	1/1:0,25:25:66.78:431,67,0	1/1:0,28:28:73.30:506,73,0	1/1:0,18:18:53.13:382,53,0	1/1:0,11:11:23.71:231,24,0	1/1:0,6:6:17.92:141,18,0	1/1:0,13:13:38.92:341,39,0	1/1:0,16:16:32.10:181,32,0	1/1:0,6:6:5.87:35,6,0	1/1:0,14:14:31.60:172,32,0	1/1:0,13:13:28.44:141,28,0	1/1:0,10:10:17.84:120,18,0	1/1:0,18:18:44.10:289,44,0	1/1:1,21:21:59.79:482,60,0	1/1:0,15:15:44.09:276,44,0	1/1:0,13:13:35.49:237,35,0
chr10	39503662	.	AG	A	2557.92	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=6.762;DP=472;FS=4.275;HRun=3;HaplotypeScore=301.8143;InbreedingCoeff=0.7645;MQ=63.54;MQ0=0;MQRankSum=-8.581;QD=5.89;ReadPosRankSum=4.804;VQSLOD=0.5053;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,22:25:36.25:127,36,0	1/1:1,8:9:7.56:31,8,0	0/0:20,0:20:30.58:0,31,609	0/0:18,0:18:39.11:0,39,456	1/1:3,19:21:16.81:47,17,0	1/1:0,16:16:29.17:96,29,0	1/1:2,12:14:24.46:83,24,0	1/1:0,27:28:70.89:351,71,0	1/1:0,18:18:19.07:89,19,0	1/1:0,21:20:54.23:267,54,0	1/1:1,10:11:8.66:22,9,0	1/1:0,18:18:27.26:82,27,0	1/1:0,22:22:37.61:112,38,0	1/1:0,25:25:38.27:114,38,0	1/1:1,27:28:43.42:129,43,0	1/1:0,18:18:35.75:116,36,0	1/1:2,10:12:9.38:34,9,0	1/1:0,6:6:16.34:77,16,0	1/1:1,12:13:33.41:164,33,0	1/1:0,16:16:21.79:64,22,0	1/1:0,6:6:4.31:14,4,0	1/1:0,14:14:18.40:55,18,0	1/1:1,12:13:5.21:25,5,0	1/1:0,10:10:7.18:19,7,0	1/1:0,18:18:29.55:92,30,0	1/1:2,20:21:52.16:232,52,0	1/1:1,15:16:36.20:140,36,0	1/1:0,13:13:28.99:109,29,0
chr10	39503680	.	GT	G	8781.79	PASS	AB=0.786;AC=55;AF=0.982;AN=56;BaseQRankSum=-0.903;DP=577;FS=2.966;HRun=1;HaplotypeScore=284.2578;InbreedingCoeff=-0.0162;MQ=61.66;MQ0=0;MQRankSum=0.730;QD=15.22;ReadPosRankSum=4.562;VQSLOD=4.7610;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:31,1:32:67.74:439,68,0	1/1:9,0:9:23.75:163,24,0	1/1:29,0:28:51.87:228,52,0	0/1:16,6:22:5.62:175,0,6	1/1:22,0:21:41.25:275,41,0	1/1:20,0:20:53.42:365,53,0	1/1:16,0:16:46.72:302,47,0	1/1:31,0:31:42.38:387,42,0	1/1:24,0:24:67.86:452,68,0	1/1:27,0:27:33.77:350,34,0	1/1:17,0:17:37.85:230,38,0	1/1:20,0:20:47.20:310,47,0	1/1:22,2:24:65.35:480,65,0	1/1:26,0:26:65.07:444,65,0	1/1:33,0:33:85.34:557,85,0	1/1:19,0:19:31.91:297,32,0	1/1:15,0:15:15.20:178,15,0	1/1:5,0:5:11.69:72,12,0	1/1:22,0:22:35.47:275,35,0	1/1:26,0:26:56.25:381,56,0	1/1:10,0:10:26.44:168,26,0	1/1:20,0:20:55.85:363,56,0	1/1:15,0:15:41.60:293,42,0	1/1:10,0:10:20.83:147,21,0	1/1:18,0:18:50.41:349,50,0	1/1:28,1:28:69.77:430,70,0	1/1:18,0:18:52.66:327,53,0	1/1:18,0:18:53.13:345,53,0
chr10	39504310	.	G	GGTGTGTGTGTGTGTGTGTGTGT	16293.28	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=5.932;DP=743;FS=2.494;HRun=0;HaplotypeScore=374.8860;InbreedingCoeff=0.9222;MQ=64.53;MQ0=2;MQRankSum=-10.636;QD=51.24;ReadPosRankSum=-1.762;VQSLOD=2.9284;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:26:16.58:342,17,0	1/1:5,1:12:9.03:726,9,0	0/0:40,0:29:31.92:0,32,989	0/0:31,0:23:21.06:0,21,846	0/0:23,0:26:63.22:0,63,2711	1/1:6,8:28:3.01:307,3,0	1/1:29,0:29:28.84:890,29,0	0/0:35,0:36:66.19:0,66,2530	0/0:27,0:27:54.19:0,54,2845	1/1:41,0:39:99:5098,99,0	1/1:23,0:21:8.76:166,9,0	1/1:4,9:21:5.36:612,5,0	1/1:15,0:15:21.07:1198,21,0	1/1:27,0:26:24.03:963,24,0	0/0:19,0:24:48.16:0,48,2195	0/0:22,0:25:60.18:0,60,2791	0/0:28,0:29:63.15:0,63,2721	1/1:23,0:23:45.15:2599,45,0	0/0:16,0:18:38.49:0,38,1468	0/0:37,0:43:99:0,102,4683	0/0:35,0:36:93.30:0,93,4308	0/0:26,0:27:47.23:0,47,3318	1/1:8,0:32:6.02:455,6,0	1/1:8,7:24:18.06:1788,18,0	1/1:17,0:16:14.99:1150,15,0	0/0:21,0:21:51.05:0,51,2137	0/0:22,0:24:60.15:0,60,2884	0/0:14,0:17:36.12:0,36,1710
chr10	39505066	.	CACACATATAT	C	1938.99	PASS	AB=1.000;AC=15;AF=0.278;AN=54;BaseQRankSum=-4.810;DP=264;FS=5.293;HRun=0;HaplotypeScore=100.0139;InbreedingCoeff=0.4038;MQ=66.93;MQ0=4;MQRankSum=-5.862;QD=21.08;ReadPosRankSum=0.080;VQSLOD=2.0293;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:11,0:11:29.43:29,0,176	0/0:4,0:4:9.03:0,9,172	0/0:8,0:3:2.98:0,3,21	0/0:11,0:5:0.78:0,1,2	0/0:11,0:11:14.35:0,14,211	1/1:0,8:7:15.05:493,15,0	1/1:0,8:8:12.04:361,12,0	0/0:33,0:33:77.66:0,78,744	0/0:4,0:4:9.03:0,9,151	0/1:12,0:12:81.53:82,0,380	0/0:10,0:10:24.04:0,24,303	1/1:0,7:7:12.04:392,12,0	0/1:7,0:7:32.39:32,0,173	0/1:8,0:8:18.86:19,0,245	0/0:2,0:2:6.02:0,6,101	0/0:7,0:7:6.02:0,6,101	0/0:14,0:14:15.05:0,15,252	0/1:21,0:21:7.95:8,0,435	0/0:5,0:4:8.99:0,9,84	0/0:8,0:8:20.22:0,20,328	0/0:13,0:13:15.05:0,15,260	./.	1/1:0,6:6:15.05:490,15,0	1/1:0,4:4:6.02:203,6,0	0/0:9,0:9:18.01:0,18,233	0/0:10,0:10:24.85:0,25,413	0/0:8,0:8:9.03:0,9,151	0/0:15,0:15:27.09:0,27,452
chr10	39505068	.	CACAT	C	4673.11	PASS	AB=0.945;AC=41;AF=0.788;AN=52;BaseQRankSum=-1.429;DP=265;FS=9.594;HRun=0;HaplotypeScore=67.1715;InbreedingCoeff=0.0022;MQ=69.09;MQ0=3;MQRankSum=-1.011;QD=19.55;ReadPosRankSum=2.077;VQSLOD=3.3352;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:12,0:12:24.03:108,0,24	0/1:4,0:4:22.58:23,0,26	./.	0/0:10,0:5:0.47:0,0,2	1/1:0,10:11:15.05:273,15,0	1/1:8,0:7:15:135,15,0	1/1:8,0:8:10.16:75,10,0	1/1:1,30:31:83.83:802,84,0	1/1:0,4:4:9.03:178,9,0	1/1:12,0:12:21.83:222,22,0	0/1:10,0:10:48.91:125,0,49	1/1:7,0:7:11.99:106,12,0	0/1:7,0:7:3.55:4,0,49	0/0:8,0:8:1.25:0,1,47	1/1:0,2:2:6.02:118,6,0	1/1:0,7:7:5.82:118,6,0	1/1:0,15:15:15.05:295,15,0	0/1:22,0:22:42.96:260,0,43	1/1:5,0:4:2.32:45,2,0	0/1:3,4:8:10.58:253,0,11	1/1:1,12:13:12.93:239,13,0	./.	1/1:6,0:6:14.98:133,15,0	1/1:4,0:4:6.01:57,6,0	0/1:9,0:9:25.75:126,0,26	1/1:2,8:10:24.85:267,25,0	1/1:0,9:9:9.03:178,9,0	1/1:0,15:15:27.09:534,27,0
chr10	39505070	.	CATAT	C	4064.29	PASS	AB=0.843;AC=45;AF=0.833;AN=54;BaseQRankSum=3.964;DP=266;FS=0.000;HRun=0;HaplotypeScore=69.5369;InbreedingCoeff=0.2289;MQ=68.95;MQ0=3;MQRankSum=-1.248;QD=16.86;ReadPosRankSum=5.951;VQSLOD=2.5966;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,4:12:15.05:236,15,0	1/1:2,2:4:2.10:46,2,0	0/0:8,0:4:0:0,0,0	0/0:12,0:5:0.47:0,0,1	1/1:11,0:11:15.04:176,15,0	1/1:8,0:7:15.03:148,15,0	1/1:8,0:8:7.10:72,7,0	1/1:30,0:30:12.23:118,12,0	1/1:4,0:4:9.03:104,9,0	1/1:0,11:12:35.76:488,36,0	1/1:4,5:10:9.06:244,9,0	1/1:7,0:7:12.02:120,12,0	1/1:3,0:7:10.42:62,10,0	1/1:0,0:8:19.84:120,20,0	1/1:2,0:2:6.02:69,6,0	1/1:7,0:7:5.82:68,6,0	1/1:15,0:15:15.04:172,15,0	1/1:4,17:22:36.12:592,36,0	0/0:5,0:4:5.81:0,6,34	0/1:8,0:8:48.83:153,0,49	1/1:13,0:13:3.04:131,3,0	./.	1/1:6,0:6:15.03:146,15,0	1/1:4,0:4:6.01:57,6,0	0/1:1,7:9:2.96:235,0,3	0/1:10,0:10:6.70:82,0,7	1/1:9,0:9:9.03:106,9,0	1/1:15,0:15:27.08:319,27,0
chr10	39506006	.	TTCTCTCTGTCTCTCTCTGTC	T	6476.66	PASS	AC=24;AF=0.480;AN=50;BaseQRankSum=-9.486;DP=605;FS=0.538;HRun=0;HaplotypeScore=272.3451;InbreedingCoeff=0.9539;MQ=56.72;MQ0=15;MQRankSum=0.840;QD=23.72;ReadPosRankSum=0.148;VQSLOD=3.4917;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:22:9.03:0,9,141	0/0:8,0:8:12.02:0,12,162	./.	./.	1/1:24,0:24:12.04:256,12,0	0/0:21,0:19:14.80:0,15,152	0/0:18,0:17:11.51:0,12,125	1/1:38,0:32:8.93:80,9,0	1/1:20,0:20:27.09:677,27,0	0/0:27,0:24:26.02:0,26,330	0/0:15,0:14:26.95:0,27,253	0/0:15,0:15:17.67:0,18,167	0/0:27,0:29:28.03:0,28,403	0/0:26,0:23:33.05:0,33,412	1/1:22,0:21:39.10:837,39,0	1/1:20,0:20:30.07:630,30,0	1/1:25,0:21:27.09:570,27,0	0/0:19,0:18:33.10:0,33,471	1/1:13,0:12:15.05:287,15,0	1/1:21,0:21:30.09:637,30,0	1/1:27,0:25:15.05:378,15,0	./.	0/0:20,0:19:17.68:0,18,167	0/0:29,0:28:19.60:0,20,257	0/0:13,0:12:17.97:0,18,224	1/1:20,0:18:30.10:587,30,0	1/1:27,0:27:33.11:758,33,0	1/1:16,0:16:33.11:778,33,0
chr10	39506038	.	C	CTG	5031.69	PASS	AB=0.733;AC=13;AF=0.250;AN=52;BaseQRankSum=-8.455;DP=528;FS=5.274;HRun=0;HaplotypeScore=109.7406;InbreedingCoeff=-0.0834;MQ=45.48;MQ0=43;MQRankSum=1.496;QD=19.35;ReadPosRankSum=4.606;VQSLOD=4.5594;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:19:8.92:0,9,134	0/0:8,0:8:12.02:0,12,162	./.	./.	0/1:6,12:16:9.92:217,0,10	0/0:14,0:11:19.29:0,19,256	0/0:24,0:17:9.15:0,9,117	0/1:22,0:8:59.52:60,0,162	0/1:12,9:20:11.72:490,0,12	0/0:21,0:15:39.12:0,39,574	0/0:17,0:15:27.03:0,27,326	0/0:15,0:13:21.04:0,21,278	0/0:25,0:24:38.97:0,39,489	0/0:26,0:22:36.09:0,36,472	0/1:10,12:18:3.74:642,0,4	0/1:11,7:18:98.03:471,0,98	0/1:23,6:22:99:421,0,122	0/0:19,0:18:42.04:0,42,611	0/1:10,4:13:99:254,0,254	0/1:9,8:17:12.60:510,0,13	0/1:12,13:16:70.81:268,0,71	0/0:21,0:21:3.01:0,3,49	0/0:15,0:12:18.04:0,18,253	0/0:22,0:20:19.60:0,20,257	0/0:16,0:13:18.06:0,18,275	0/1:21,6:23:99:475,0,339	0/1:12,17:25:99:588,0,149	1/1:2,16:16:33.11:637,33,0
chr10	39506058	.	CTG	C	1256.79	PASS	AB=0.900;AC=22;AF=0.423;AN=52;BaseQRankSum=-1.057;DP=512;FS=4.143;HRun=0;HaplotypeScore=128.3066;InbreedingCoeff=0.4466;MQ=39.15;MQ0=43;MQRankSum=-0.429;QD=4.91;ReadPosRankSum=-2.437;VQSLOD=2.1309;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:21,7:21:2.91:47,3,0	1/1:2,3:5:0.47:1,0,0	./.	./.	0/0:16,0:13:15.03:0,15,255	1/1:6,10:13:11.93:151,12,0	0/1:17,3:12:0.01:1,0,0	0/0:23,0:12:36.09:0,36,630	0/0:26,0:24:28.32:0,28,408	0/1:12,3:10:99:193,0,138	1/1:9,7:13:12.04:179,12,0	1/1:6,7:11:15.03:185,15,0	0/1:29,0:28:93.45:93,0,224	0/1:21,0:17:28.70:29,0,109	0/0:18,0:15:24.06:0,24,417	0/0:20,0:17:24.08:0,24,443	0/0:26,0:17:28.74:0,29,479	0/1:12,7:18:99:236,0,134	0/0:24,0:21:54.08:0,54,860	0/0:14,0:14:18.03:0,18,310	0/0:25,0:15:18.04:0,18,302	0/0:26,0:25:3.01:0,3,50	1/1:11,4:12:12.02:142,12,0	1/1:4,13:15:3:27,3,0	1/1:10,5:12:12.01:138,12,0	0/1:26,1:24:6.26:6,0,809	0/0:30,0:26:49.41:0,49,842	0/0:8,0:6:18.04:0,18,287
chr10	39506080	.	CTG	C	420.69	PASS	AB=0.890;AC=14;AF=0.318;AN=44;BaseQRankSum=5.481;DP=517;FS=9.668;HRun=0;HaplotypeScore=113.6183;InbreedingCoeff=0.2142;MQ=32.98;MQ0=43;MQRankSum=-3.208;QD=2.60;ReadPosRankSum=-3.991;VQSLOD=0.3074;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,8:20:3.90:0,4,21	1/1:3,5:7:6.49:75,6,0	./.	./.	0/0:15,0:12:3.01:0,3,36	1/1:3,14:15:5.90:69,6,0	0/1:13,6:11:0.63:1,0,1	0/0:34,0:28:71.51:0,72,1137	0/1:27,0:25:14.99:15,0,33	0/1:11,4:11:32.17:225,0,32	./.	1/1:4,10:12:3:28,3,0	0/0:31,0:29:18.19:0,18,266	0/0:26,0:20:8.24:0,8,123	0/1:16,0:13:17.53:18,0,51	0/0:24,0:19:9.50:0,10,174	0/0:22,0:13:20.80:0,21,319	0/1:14,5:16:99:104,0,198	0/0:21,0:19:38.75:0,39,671	0/1:13,0:13:8.35:8,0,52	0/0:22,0:12:8.71:0,9,135	0/0:27,0:26:5.60:0,6,40	./.	1/1:10,4:11:2.74:12,3,0	./.	0/0:28,1:26:15.46:0,15,874	0/0:29,0:25:28.08:0,28,427	./.
chr10	39506094	.	GTCTCTC	G	1451.77	PASS	AB=0.927;AC=21;AF=0.500;AN=42;BaseQRankSum=0.290;DP=569;FS=6.519;HRun=0;HaplotypeScore=127.5428;InbreedingCoeff=-0.0075;MQ=31.68;MQ0=52;MQRankSum=-0.490;QD=4.17;ReadPosRankSum=4.137;VQSLOD=1.1106;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:23:4.86:0,5,23	0/1:9,0:8:3.19:4,0,3	./.	./.	1/1:16,2:11:3.01:43,3,0	0/0:19,1:19:0:0,0,1	0/0:26,2:18:1.57:0,2,4	0/1:16,0:29:32.02:115,0,32	1/1:28,0:26:6.02:99,6,0	0/1:16,0:12:0.77:107,0,1	./.	./.	1/1:31,0:28:5.85:147,6,0	1/1:27,0:21:2.55:49,3,0	./.	1/1:26,0:21:1.12:14,1,0	0/1:20,4:15:56.91:105,0,57	0/1:22,0:18:51.63:82,0,52	1/1:19,0:18:6.90:241,7,0	0/0:17,0:16:2.37:0,2,8	0/0:19,1:12:0.89:0,1,2	1/1:22,3:25:6.01:88,6,0	./.	0/0:12,2:10:0.89:0,1,2	./.	0/1:31,1:29:86.18:252,0,86	0/1:35,0:31:55.50:222,0,56	0/0:9,0:7:1.18:0,1,33
chr10	39506113	.	TCTCTCTCACACACA	T	5784.33	PASS	AB=0.949;AC=36;AF=0.692;AN=52;BaseQRankSum=1.862;DP=607;FS=0.000;HRun=0;HaplotypeScore=177.6577;InbreedingCoeff=-0.0650;MQ=32.84;MQ0=52;MQRankSum=-1.377;QD=10.85;ReadPosRankSum=4.275;VQSLOD=3.6285;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:24:4.01:0,4,77	1/1:13,0:12:5.01:250,5,0	./.	./.	0/1:28,1:22:4.37:145,0,4	1/1:16,9:22:2.12:61,2,0	0/1:26,0:20:0.45:0,0,0	0/1:26,0:22:66.46:168,0,66	0/1:7,20:25:12.82:200,0,13	0/1:20,0:16:5.71:781,0,6	1/1:20,0:16:0.94:2,1,0	1/1:17,5:19:2.98:62,3,0	1/1:15,0:29:20.52:534,21,0	1/1:7,0:21:2.25:117,2,0	1/1:10,14:21:3.76:27,4,0	1/1:11,18:24:13.73:168,14,0	0/1:23,0:13:99:121,0,116	0/1:22,0:18:25.48:539,0,25	1/1:19,0:19:16.43:635,16,0	0/0:23,1:20:0.69:0,1,21	0/0:19,0:12:0.43:0,0,1	1/1:22,1:21:6.02:165,6,0	1/1:16,2:13:5.91:58,6,0	0/1:15,0:10:0.67:68,0,1	1/1:16,0:12:1.41:3,1,0	0/1:31,0:29:96.36:545,0,96	0/1:33,1:31:23.02:788,0,23	1/1:11,0:9:24.05:348,24,0
chr10	39506115	.	TCTCTCACACACA	T	6901.37	PASS	AB=0.977;AC=42;AF=0.808;AN=52;BaseQRankSum=-2.577;DP=591;FS=0.000;HRun=0;HaplotypeScore=161.5705;InbreedingCoeff=0.1301;MQ=33.24;MQ0=50;MQRankSum=-1.040;QD=12.88;ReadPosRankSum=3.190;VQSLOD=3.1589;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:24:3.92:0,4,77	1/1:12,0:12:15.18:277,15,0	./.	./.	0/1:27,0:20:2.98:142,0,3	1/1:26,0:23:2.14:61,2,0	1/1:27,0:20:0.82:1,1,0	1/1:25,0:21:47.27:496,47,0	0/1:26,0:24:12.82:135,0,13	0/1:17,0:16:6.06:762,0,6	1/1:18,0:16:0.94:2,1,0	1/1:23,0:20:2.98:62,3,0	1/1:33,0:27:20.82:426,21,0	1/1:23,0:21:2.38:96,2,0	1/1:23,0:20:5.87:48,6,0	1/1:28,0:23:12.23:125,12,0	0/1:21,0:11:59.75:60,0,73	0/1:20,0:17:4.18:532,0,4	1/1:16,3:19:41.99:819,42,0	0/0:20,4:20:1.56:0,2,22	1/1:15,2:10:0.47:1,0,0	1/1:22,0:20:7.27:108,7,0	0/1:18,0:12:6.89:38,0,7	1/1:15,0:10:5.77:116,6,0	1/1:13,0:12:1.41:3,1,0	1/1:11,19:28:43.21:895,43,0	1/1:24,10:31:48.71:1245,49,0	1/1:10,1:9:24.08:454,24,0
chr10	39506119	.	TCACACACA	T	4782.92	PASS	AB=0.882;AC=43;AF=0.827;AN=52;BaseQRankSum=0.753;DP=579;FS=9.983;HRun=0;HaplotypeScore=149.0884;InbreedingCoeff=0.1151;MQ=32.94;MQ0=45;MQRankSum=-0.905;QD=9.13;ReadPosRankSum=-0.590;VQSLOD=3.2154;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:23:2.43:0,2,54	1/1:10,3:14:12.38:251,12,0	./.	./.	0/1:17,5:20:5.97:123,0,6	1/1:27,1:23:2.04:61,2,0	1/1:19,8:20:1.36:3,1,0	1/1:22,1:19:2.93:63,3,0	0/1:25,0:24:12.82:94,0,13	0/1:17,2:17:33.78:652,0,34	1/1:17,3:17:0.94:1,1,0	1/1:13,2:20:2.68:62,3,0	1/1:32,0:27:18.02:387,18,0	1/1:23,0:21:2.63:64,3,0	1/1:23,0:20:5.93:48,6,0	1/1:26,0:23:15.30:167,15,0	0/1:21,1:14:6.55:7,0,41	0/1:16,1:15:48.09:445,0,48	1/1:13,2:16:26.59:479,27,0	0/0:25,0:21:1.45:0,1,45	1/1:15,1:9:0.47:1,0,0	1/1:20,0:18:4.26:80,4,0	1/1:14,2:12:5.69:54,6,0	1/1:14,1:10:6.02:117,6,0	1/1:16,0:13:0.94:2,1,0	1/1:25,1:25:22.57:454,23,0	1/1:29,0:29:43.60:699,44,0	1/1:11,0:9:24.08:470,24,0
chr10	39506136	.	CACACACACACAGAGAGAGAGAGAGAG	C	4255.60	PASS	AB=0.929;AC=17;AF=0.327;AN=52;BaseQRankSum=4.208;DP=605;FS=4.149;HRun=0;HaplotypeScore=248.4782;InbreedingCoeff=-0.1519;MQ=34.71;MQ0=47;MQRankSum=-4.956;QD=13.18;ReadPosRankSum=0.627;VQSLOD=3.5158;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,7:20:1.91:0,2,72	1/1:9,6:14:18.47:976,18,0	./.	./.	0/0:22,0:17:12.04:0,12,832	0/0:35,0:30:7.38:0,7,332	0/0:32,0:25:10.02:0,10,667	0/1:23,0:18:16.99:17,0,1140	0/1:29,0:27:61.17:61,0,1337	0/1:13,11:20:99:1604,0,192	1/1:12,5:14:0.94:3,1,0	0/0:24,0:21:15.58:0,16,846	0/1:26,0:26:99:137,0,532	0/1:25,0:25:73.75:74,0,293	0/0:27,0:25:14.96:0,15,1147	0/1:33,0:28:20.74:21,0,1951	0/0:21,0:12:24.08:0,24,1166	0/1:15,5:16:68.81:724,0,69	0/1:18,0:18:77.78:78,0,523	0/0:25,0:21:3.25:0,3,98	0/0:16,0:9:2.36:0,2,125	0/0:22,0:20:12.04:0,12,837	0/0:18,0:13:9.03:0,9,638	0/0:14,0:11:12.04:0,12,684	1/1:11,0:16:2.66:5,3,0	0/1:26,0:25:99:136,0,1222	0/1:27,0:28:99:407,0,276	0/1:12,0:9:11.93:12,0,720
chr10	39506138	.	CACACACACAG	C	5247.88	PASS	AB=0.980;AC=35;AF=0.673;AN=52;BaseQRankSum=2.569;DP=602;FS=1.552;HRun=0;HaplotypeScore=171.9139;InbreedingCoeff=0.0726;MQ=35.50;MQ0=45;MQRankSum=-5.643;QD=10.50;ReadPosRankSum=3.554;VQSLOD=3.9567;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:19:2.10:0,2,54	1/1:15,0:14:18.23:321,18,0	./.	./.	0/1:23,0:18:33.54:34,0,39	1/1:17,14:29:4.98:110,5,0	1/1:31,0:25:16.36:173,16,0	1/1:20,0:15:3.25:63,3,0	0/1:30,0:28:74.14:74,0,186	0/1:22,0:19:30.65:721,0,31	1/1:14,0:14:1.41:3,1,0	0/1:23,0:21:30.44:30,0,101	1/1:30,1:26:24.03:496,24,0	1/1:27,0:25:8.59:108,9,0	0/0:28,0:26:14.26:0,14,148	0/1:33,0:28:47.96:48,0,163	0/0:21,0:12:14.81:0,15,152	0/1:18,0:16:48.09:473,0,48	1/1:17,0:17:33.89:533,34,0	0/0:14,0:23:2.43:0,2,45	1/1:15,1:8:2.83:20,3,0	0/1:24,0:22:65.17:65,0,94	0/1:18,0:14:3.96:4,0,59	0/1:14,0:11:13.04:93,0,13	1/1:17,0:15:1.41:2,1,0	1/1:24,1:24:13.77:586,14,0	1/1:26,0:28:49.88:774,50,0	1/1:6,5:10:24.08:516,24,0
chr10	39506140	.	CACACACAGAGAGAG	C	4374.60	PASS	AB=0.975;AC=22;AF=0.423;AN=52;BaseQRankSum=7.375;DP=572;FS=2.078;HRun=0;HaplotypeScore=188.1599;InbreedingCoeff=0.0766;MQ=36.12;MQ0=44;MQRankSum=-7.447;QD=12.36;ReadPosRankSum=4.026;VQSLOD=3.6211;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:16:2.18:0,2,35	1/1:15,0:14:18.49:473,18,0	./.	./.	0/0:22,0:17:12.04:0,12,294	0/1:33,0:29:0.37:0,0,63	0/0:27,0:21:11.20:0,11,218	0/1:19,0:13:33.16:33,0,174	0/1:30,0:28:37.35:37,0,699	0/1:23,0:19:29.19:777,0,29	1/1:14,0:12:1.83:4,2,0	0/0:21,0:20:13.86:0,14,368	0/1:32,0:27:99:360,0,142	0/1:26,0:24:39.52:40,0,49	0/0:29,0:27:18.06:0,18,600	0/1:34,0:29:14.77:15,0,1003	0/0:17,0:11:18.06:0,18,464	0/1:18,0:14:28.48:421,0,28	1/1:9,5:14:36.12:703,36,0	0/0:24,3:23:0.91:0,1,25	1/1:16,0:8:0.47:1,0,0	0/0:21,0:19:6.10:0,6,416	0/0:19,0:14:18.06:0,18,560	0/0:13,0:11:10.84:0,11,208	1/1:16,0:13:1.41:3,1,0	0/1:25,0:24:99:214,0,345	1/1:21,4:27:48.60:1013,49,0	0/1:8,0:10:3.89:280,0,4
chr10	39506959	.	C	CA	30583.95	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-7.528;DP=741;FS=0.619;HRun=0;HaplotypeScore=68.5933;InbreedingCoeff=0.9991;MQ=82.47;MQ0=0;MQRankSum=-10.237;QD=43.63;ReadPosRankSum=5.739;VQSLOD=4.8062;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,49:49:99:2109,132,0	1/1:0,11:11:27.09:432,27,0	0/0:19,0:19:54.15:0,54,714	0/0:21,0:21:55.98:0,56,720	1/1:0,18:18:45.62:709,46,0	1/1:1,21:22:57.19:911,57,0	1/1:4,29:33:78.27:1247,78,0	1/1:0,33:33:93.32:1471,93,0	1/1:1,28:29:78.27:1247,78,0	1/1:1,27:28:84.28:1323,84,0	1/1:1,11:12:33.11:527,33,0	1/1:1,26:27:75.26:1198,75,0	1/1:1,31:32:84.29:1343,84,0	1/1:0,29:29:87.30:1391,87,0	1/1:0,44:44:99:1870,117,0	1/1:0,38:38:99:1774,111,0	1/1:0,36:36:96.33:1535,96,0	1/1:0,29:29:78.27:1247,78,0	1/1:0,18:18:54.18:856,54,0	1/1:0,12:12:33.11:526,33,0	1/1:2,42:44:99:1918,120,0	1/1:1,21:22:54.18:863,54,0	1/1:1,12:13:36.12:575,36,0	1/1:0,26:26:78.27:1247,78,0	1/1:0,18:18:54.18:863,54,0	1/1:3,30:33:90.27:1389,90,0	1/1:0,32:31:87.30:1390,87,0	1/1:0,13:13:39.13:623,39,0
chr10	39507259	.	AGTGTGTGTGT	A	3005.35	PASS	AB=0.868;AC=28;AF=0.500;AN=56;BaseQRankSum=3.331;DP=543;FS=9.641;HRun=0;HaplotypeScore=251.7472;InbreedingCoeff=0.6199;MQ=60.28;MQ0=9;MQRankSum=-5.783;QD=9.30;ReadPosRankSum=2.762;VQSLOD=1.0127;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:24:21.07:0,21,929	0/0:6,0:6:9.01:0,9,233	0/0:21,0:15:3.01:0,3,55	0/0:31,0:19:12.04:0,12,201	1/1:7,3:11:8.94:130,9,0	0/1:12,0:16:15.74:16,0,97	0/0:13,0:15:8.59:0,9,82	0/1:30,0:28:37.48:84,0,37	1/1:11,3:14:14.93:240,15,0	0/0:23,0:23:26.45:0,26,925	0/0:13,0:15:21.07:0,21,794	0/0:10,1:16:16.90:0,17,171	0/0:10,0:11:12.04:0,12,279	0/0:23,0:24:33.10:0,33,1229	1/1:14,5:20:12.04:337,12,0	1/1:11,3:14:12:273,12,0	1/1:16,2:19:10.23:182,10,0	0/0:15,0:15:18.03:0,18,570	1/1:18,0:17:5.29:49,5,0	1/1:16,7:22:20.95:404,21,0	1/1:46,1:47:6.56:80,7,0	1/1:17,7:23:11.99:272,12,0	0/1:8,0:10:33.94:34,0,43	0/1:21,0:26:1.94:2,0,93	0/0:17,0:18:42.62:0,43,1643	1/1:17,2:19:9.03:232,9,0	1/1:12,6:19:15.05:428,15,0	1/1:8,4:12:15.05:447,15,0
chr10	39507460	.	A	AG	8938.58	PASS	AB=0.923;AC=54;AF=0.964;AN=56;BaseQRankSum=-5.213;DP=401;FS=0.000;HRun=1;HaplotypeScore=394.1081;InbreedingCoeff=-0.0716;MQ=59.94;MQ0=1;MQRankSum=-1.237;QD=22.29;ReadPosRankSum=0.687;VQSLOD=2.6927;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:17:24.55:334,25,0	1/1:9,1:10:1.80:251,2,0	1/1:4,2:7:1.65:130,2,0	0/1:9,1:11:31.41:31,0,41	1/1:14,0:14:19.34:247,19,0	1/1:4,0:4:7.63:119,8,0	1/1:17,4:21:32.60:404,33,0	1/1:11,2:13:33.10:463,33,0	1/1:16,1:17:33.22:530,33,0	1/1:22,0:22:40.82:639,41,0	1/1:12,0:12:18.05:215,18,0	1/1:13,2:15:12.87:287,13,0	1/1:14,0:14:24.98:290,25,0	1/1:18,2:20:48.99:614,49,0	0/1:22,0:22:8.84:410,0,9	1/1:9,0:9:22.36:334,22,0	1/1:8,0:8:8.23:96,8,0	1/1:3,0:3:3.01:45,3,0	1/1:6,1:7:21.07:323,21,0	1/1:26,5:31:21.97:542,22,0	1/1:9,2:11:18.06:261,18,0	1/1:20,1:20:34.79:378,35,0	1/1:30,0:30:33.70:407,34,0	1/1:7,0:7:3.12:39,3,0	1/1:16,2:18:38.69:529,39,0	1/1:12,0:12:22.66:289,23,0	1/1:16,1:17:35.95:472,36,0	1/1:8,0:8:20.57:259,21,0
chr10	39507614	.	A	ATTT	4277.42	PASS	AB=0.771;AC=24;AF=0.429;AN=56;BaseQRankSum=16.039;DP=626;FS=2.898;HRun=9;HaplotypeScore=100.6543;InbreedingCoeff=0.9055;MQ=74.32;MQ0=1;MQRankSum=-0.966;QD=15.22;ReadPosRankSum=0.665;VQSLOD=2.3403;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,117,1459	0/0:6,0:6:15.04:0,15,190	0/1:14,0:19:3.51:31,0,4	0/1:7,0:12:1.91:8,0,2	1/1:2,1:23:49.03:398,49,0	1/1:1,0:12:28.14:208,28,0	1/1:4,0:18:44.78:340,45,0	0/0:31,0:32:57.74:0,58,860	1/1:1,0:19:50.82:394,51,0	0/0:31,0:31:78.19:0,78,974	0/0:10,0:10:24.01:0,24,273	1/1:1,0:28:59.55:459,60,0	0/0:23,0:23:54.11:0,54,668	0/0:28,0:28:72.17:0,72,891	1/1:4,0:27:21.88:395,22,0	1/1:3,0:24:50.79:388,51,0	1/1:3,0:30:71.73:551,72,0	0/0:14,0:14:36.10:0,36,453	0/0:12,0:12:24.02:0,24,280	0/0:18,0:18:48.13:0,48,604	0/0:31,0:31:84.22:0,84,1042	1/1:0,0:23:56.22:409,56,0	1/1:2,0:13:23.74:182,24,0	1/1:4,1:32:62.76:515,63,0	0/0:20,0:20:54.13:0,54,681	0/0:32,0:32:87.25:0,87,1099	0/0:29,0:28:69.17:0,69,869	0/0:9,0:8:24.08:0,24,303
chr10	39508302	.	CA	C	787.45	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.699;DP=810;FS=0.812;HRun=1;HaplotypeScore=75.8722;InbreedingCoeff=0.9990;MQ=84.39;MQ0=0;MQRankSum=-0.797;QD=35.79;ReadPosRankSum=0.672;VQSLOD=3.8527;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:65,0:64:99:0,190,2962	0/0:9,0:9:27.06:0,27,406	0/0:29,0:29:86.75:0,87,1269	0/0:32,0:32:88.20:0,88,1386	0/0:21,0:21:63.18:0,63,960	0/0:31,0:31:93.32:0,93,1487	0/0:29,0:29:87.30:0,87,1388	0/0:27,0:27:81.27:0,81,1271	0/0:26,0:26:78.27:0,78,1244	0/0:36,0:36:99:0,108,1702	0/0:24,0:24:72.25:0,72,1151	0/0:23,0:23:69.24:0,69,1098	0/0:36,0:36:99:0,105,1672	0/0:28,0:28:84.26:0,84,1297	0/0:25,0:25:75.26:0,75,1196	0/0:33,0:33:96.33:0,96,1530	0/0:31,0:31:93.32:0,93,1485	0/0:21,0:21:63.21:0,63,997	0/0:19,0:19:57.19:0,57,910	0/0:23,0:23:69.24:0,69,1103	0/0:39,0:39:99:0,117,1871	0/0:23,0:23:69.24:0,69,1103	0/0:29,0:29:87.25:0,87,1340	0/0:31,0:31:93.27:0,93,1454	1/1:0,22:22:63.21:882,63,0	0/0:50,0:50:99:0,151,2394	0/0:19,0:19:57.19:0,57,910	0/0:29,0:29:87.30:0,87,1389
chr10	39508357	.	CGTGT	C	890.80	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.723;DP=814;FS=0.000;HRun=0;HaplotypeScore=139.6857;InbreedingCoeff=0.9959;MQ=77.51;MQ0=2;MQRankSum=-2.166;QD=37.12;ReadPosRankSum=-1.055;VQSLOD=3.5172;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,132,3163	0/0:9,0:9:24.08:0,24,609	0/0:46,0:43:99:0,108,2368	0/0:36,0:32:57.15:0,57,1353	0/0:30,0:31:87.09:0,87,2072	0/0:25,0:25:75.23:0,75,1668	0/0:32,0:32:90.30:0,90,2185	0/0:28,0:28:72.24:0,72,1715	0/0:23,0:23:60.19:0,60,1471	0/0:24,0:24:60.21:0,60,1461	0/0:19,0:20:47.91:0,48,979	0/0:26,0:26:66.23:0,66,1617	0/0:33,0:33:90.31:0,90,2178	0/0:30,0:30:81.28:0,81,1997	0/0:29,0:30:84.08:0,84,2009	0/0:38,0:39:99:0,114,2748	0/0:29,0:29:75.26:0,75,1899	0/0:18,0:18:48.16:0,48,1158	0/0:20,0:20:39.13:0,39,976	0/0:28,0:28:69.19:0,69,1602	0/0:43,0:43:99:0,114,2637	0/0:26,0:26:66.21:0,66,1566	0/0:19,0:19:45.15:0,45,1050	0/0:31,0:31:75.26:0,75,1855	1/1:10,14:24:63.17:986,63,0	0/0:44,0:44:99:0,108,2564	0/0:36,0:36:93.32:0,93,2325	0/0:13,0:13:24.08:0,24,609
chr10	39509197	.	CGAGAGAGA	C	610.52	PASS	AB=0.899;AC=12;AF=0.222;AN=54;BaseQRankSum=3.218;DP=608;FS=0.000;HRun=0;HaplotypeScore=180.0213;InbreedingCoeff=0.2747;MQ=65.84;MQ0=16;MQRankSum=-3.129;QD=3.39;ReadPosRankSum=-0.930;VQSLOD=1.8994;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:13.28:0,13,250	0/0:7,0:7:4.26:0,4,96	./.	0/0:50,0:21:6.02:0,6,77	0/0:19,0:19:8.98:0,9,72	0/1:9,6:15:14.97:87,0,15	1/1:18,0:18:23.55:216,24,0	0/0:21,0:21:18.05:0,18,236	0/1:18,0:18:35.91:36,0,138	0/0:29,0:29:44.57:0,45,857	0/0:18,0:20:29.87:0,30,922	1/1:16,8:26:8.43:91,8,0	0/1:15,0:14:32.69:57,0,33	0/0:18,0:18:8.85:0,9,57	0/1:17,0:17:38.81:39,0,41	0/0:25,0:25:21:0,21,223	0/1:22,0:22:89:89,0,144	0/0:16,0:19:36.11:0,36,900	0/0:19,0:19:18.48:0,18,351	0/0:16,0:16:30.07:0,30,504	0/0:20,0:20:7.70:0,8,90	0/0:21,0:21:17.73:0,18,136	0/1:9,8:17:13.11:15,0,13	1/1:24,7:32:19.87:142,20,0	0/0:13,0:12:12.02:0,12,173	0/0:28,0:28:40.46:0,40,775	0/0:14,0:18:15.35:0,15,293	0/0:13,0:13:9:0,9,102
chr10	39509224	.	GAGAGAGAGAGAGAGAA	G	1702.38	PASS	AB=0.980;AC=16;AF=0.286;AN=56;BaseQRankSum=-0.235;DP=689;FS=15.810;HRun=0;HaplotypeScore=270.4421;InbreedingCoeff=0.3824;MQ=49.52;MQ0=30;MQRankSum=4.154;QD=6.04;ReadPosRankSum=-3.733;VQSLOD=0.7708;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:49,0:49:99:139,0,617	0/0:9,0:9:20.28:0,20,692	1/1:22,0:3:2.60:10,3,0	0/0:48,0:6:2.98:0,3,22	0/1:21,0:21:12:12,0,16	0/0:18,0:18:32.29:0,32,627	0/0:21,0:21:43.23:0,43,466	0/0:25,0:22:38.25:0,38,684	1/1:18,1:18:3.68:262,4,0	0/0:34,0:34:80.10:0,80,2277	0/0:20,0:20:38.13:0,38,1490	0/1:24,0:24:4.75:5,0,116	0/1:21,0:20:99:117,0,360	0/1:20,0:20:56.84:57,0,96	1/1:18,4:22:20.99:287,21,0	1/1:27,3:30:32.79:284,33,0	0/1:26,3:29:13.96:537,0,14	0/0:21,0:21:48.09:0,48,1621	0/0:21,0:18:39:0,39,991	0/0:26,0:26:59.40:0,59,1930	0/0:22,0:21:24.93:0,25,390	1/1:21,3:24:14.97:165,15,0	0/0:18,0:18:20.73:0,21,378	0/0:44,0:44:61.98:0,62,1118	0/0:14,0:13:3.73:0,4,375	0/0:29,0:29:60.66:0,61,1901	0/0:19,0:19:33.99:0,34,1030	0/0:18,0:18:36.12:0,36,328
chr10	39509230	.	GAGAGAGAGAA	G	1780.72	PASS	AB=0.995;AC=20;AF=0.357;AN=56;BaseQRankSum=1.295;DP=691;FS=0.430;HRun=0;HaplotypeScore=220.5054;InbreedingCoeff=0.1921;MQ=49.98;MQ0=26;MQRankSum=3.450;QD=4.65;ReadPosRankSum=-3.201;VQSLOD=2.1512;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:49,0:49:99:290,0,179	0/0:8,0:8:1.33:0,1,383	1/1:18,0:2:2.50:9,2,0	0/0:45,0:7:8.99:0,9,77	1/1:5,18:23:2.86:18,3,0	0/0:20,0:20:19.08:0,19,284	0/1:23,0:23:38.51:39,0,186	0/0:29,0:26:23.17:0,23,451	0/1:21,0:20:31.20:222,0,31	0/0:34,0:34:59.69:0,60,1537	0/0:18,0:18:38.11:0,38,1143	0/1:18,0:18:33.83:34,0,91	0/1:20,0:19:31.88:266,0,32	0/1:19,1:20:1.48:110,0,1	1/1:23,0:23:23.97:242,24,0	0/1:27,0:27:20.38:171,0,20	1/1:31,0:30:18.76:348,19,0	0/0:20,0:20:48.90:0,49,1198	0/0:21,0:18:4.22:0,4,569	0/0:30,0:30:74.29:0,74,1248	0/1:23,0:22:0.70:1,0,185	1/1:24,0:24:16.72:133,17,0	0/0:18,0:18:26.69:0,27,217	0/1:46,0:46:2.23:2,0,471	0/1:17,0:16:65.21:65,0,95	0/0:26,0:26:52.92:0,53,1363	0/0:20,0:20:35.68:0,36,704	0/0:19,0:19:41.36:0,41,342
chr10	39509449	.	G	GGA	6413.69	PASS	AB=0.782;AC=18;AF=0.321;AN=56;BaseQRankSum=8.477;DP=976;FS=3.041;HRun=0;HaplotypeScore=166.8065;InbreedingCoeff=0.8377;MQ=70.46;MQ0=25;MQRankSum=-0.779;QD=17.01;ReadPosRankSum=2.443;VQSLOD=5.0166;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,108,1285	0/0:10,0:10:27.08:0,27,334	0/0:112,0:39:11.92:0,12,290	0/1:142,0:51:0.68:1,0,206	1/1:6,19:27:39.13:640,39,0	0/0:22,0:22:32.76:0,33,537	0/0:20,0:21:38.99:0,39,460	0/0:47,0:48:83.54:0,84,1032	1/1:4,17:21:42.14:689,42,0	0/0:34,0:34:31.66:0,32,812	0/0:20,0:20:54.17:0,54,665	0/0:28,0:28:60.05:0,60,780	1/1:2,22:24:48.16:787,48,0	1/1:6,19:25:27.34:882,27,0	0/1:5,16:22:8.70:502,0,9	1/1:3,21:24:57.19:920,57,0	1/1:5,32:37:84.12:1336,84,0	0/0:19,0:17:23.24:0,23,403	0/0:15,0:13:30.09:0,30,368	0/0:37,0:37:99:0,99,1208	0/0:34,0:34:69.59:0,70,857	1/1:6,22:28:4.84:590,5,0	0/0:33,0:33:90.27:0,90,1098	0/0:32,0:33:71.73:0,72,848	1/1:26,0:26:6.02:68,6,0	0/0:29,0:29:78.24:0,78,965	0/0:29,0:29:63.03:0,63,757	0/0:31,0:31:75.24:0,75,930
chr10	39509452	.	GAGAGAGAGAGAC	G	92.14	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.073;DP=981;FS=6.198;HRun=0;HaplotypeScore=325.7685;InbreedingCoeff=0.9627;MQ=68.25;MQ0=24;MQRankSum=-1.347;QD=3.69;ReadPosRankSum=-3.339;VQSLOD=1.1181;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,114,5391	0/0:12,0:12:36.11:0,36,1779	0/0:116,0:37:31.52:0,32,649	0/0:144,0:49:49.12:0,49,813	0/0:27,0:27:50.64:0,51,1916	0/0:23,0:23:56.51:0,57,2480	0/0:21,0:21:42.14:0,42,2084	0/0:46,0:46:99:0,114,4138	0/0:19,0:19:45.13:0,45,1956	0/0:36,0:36:94.50:0,95,3719	0/0:21,0:21:57.20:0,57,3019	0/0:27,0:27:68.53:0,69,3514	0/0:24,0:24:51.18:0,51,2389	0/0:25,0:25:63.21:0,63,2825	0/0:21,0:21:42.61:0,43,1805	0/0:22,0:22:57.17:0,57,1866	0/0:37,0:37:84.16:0,84,3371	0/0:20,0:18:44.95:0,45,1906	0/0:16,0:14:39.13:0,39,1665	0/0:37,0:37:99:0,99,4705	0/0:34,0:34:84.73:0,85,3711	0/0:28,0:28:50.82:0,51,2036	0/0:32,0:32:93.30:0,93,4427	0/0:36,0:35:69.51:0,70,3865	1/1:4,21:25:11.34:177,11,0	0/0:28,0:28:78.27:0,78,4283	0/0:30,0:30:75.23:0,75,3915	0/0:29,0:29:81.26:0,81,4037
chr10	39510859	.	GT	G	3467.68	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=6.126;DP=821;FS=3.271;HRun=6;HaplotypeScore=89.6764;InbreedingCoeff=0.9976;MQ=88.65;MQ0=0;MQRankSum=-1.806;QD=28.42;ReadPosRankSum=1.446;VQSLOD=4.1788;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,31:34:90.11:967,90,0	1/1:0,8:8:18.05:193,18,0	0/0:32,0:32:78.19:0,78,975	0/0:31,0:31:76.09:0,76,987	0/0:32,0:32:93.30:0,93,1221	0/0:24,0:24:69.22:0,69,908	0/0:23,0:23:63.19:0,63,814	0/0:44,0:44:99:0,114,1497	0/0:37,0:37:99:0,105,1354	1/1:4,38:42:99:1223,114,0	1/1:0,23:23:60.15:645,60,0	0/0:32,0:32:87.28:0,87,1145	0/0:28,0:28:78.24:0,78,1008	0/0:37,0:37:99:0,105,1319	0/0:41,0:41:99:0,123,1606	0/0:34,0:34:99:0,102,1329	0/0:37,0:37:99:0,105,1350	1/1:0,15:15:42.07:439,42,0	0/0:26,0:26:60.17:0,60,771	0/0:36,0:36:99:0,99,1245	0/0:37,0:37:99:0,111,1460	0/0:28,0:28:78.25:0,78,1014	0/0:24,0:24:60.20:0,60,789	0/0:29,0:29:72.22:0,72,932	0/0:27,0:27:75.24:0,75,984	0/0:24,1:25:39.97:0,40,861	0/0:26,0:26:75.24:0,75,986	0/0:9,0:9:24.08:0,24,316
chr10	39511979	.	A	ACAGGTTCAGGTTAT	40132.77	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=-1.544;DP=664;FS=122.785;HRun=0;HaplotypeScore=231.2146;InbreedingCoeff=0.9274;MQ=62.76;MQ0=1;MQRankSum=-18.531;QD=130.73;ReadPosRankSum=0.551;VQSLOD=1.6037;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:20.34:0,20,4979	0/0:8,0:8:24.08:0,24,908	0/0:27,0:25:72.23:0,72,2401	0/0:28,0:27:78.17:0,78,2497	1/1:13,11:26:57.18:2653,57,0	1/1:14,5:18:51.18:3007,51,0	1/1:13,11:26:63.22:4073,63,0	0/0:32,0:32:93.31:0,93,3188	1/1:5,7:15:33.11:2202,33,0	0/0:20,0:20:60.21:0,60,2377	0/0:19,0:19:54.19:0,54,2270	1/1:8,11:20:57.20:3428,57,0	1/1:8,7:16:45.15:2633,45,0	1/1:10,6:14:36.08:2028,36,0	1/1:6,11:23:45.15:2881,45,0	1/1:6,10:14:36.12:2474,36,0	1/1:13,7:24:54.19:3311,54,0	0/0:32,0:31:70.55:0,71,3245	0/0:32,0:31:90.31:0,90,3482	0/0:21,0:21:60.21:0,60,2372	0/0:50,0:50:99:0,145,5837	1/1:12,9:20:54.19:2750,54,0	1/1:11,10:22:63.22:3349,63,0	1/1:8,7:18:33.11:1986,33,0	1/1:8,11:18:51.18:3311,51,0	0/0:16,0:16:45.15:0,45,1762	0/1:19,0:19:47.48:47,0,1611	0/0:19,0:19:51.14:0,51,1961
chr10	39512114	.	TTC	T	760.62	PASS	AB=0.944;AC=22;AF=0.393;AN=56;BaseQRankSum=2.477;DP=482;FS=0.893;HRun=0;HaplotypeScore=71.0802;InbreedingCoeff=-0.5228;MQ=48.62;MQ0=28;MQRankSum=-2.132;QD=1.93;ReadPosRankSum=0.474;VQSLOD=1.5354;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:33,2:33:88.70:89,0,195	0/1:8,1:8:15.41:48,0,15	0/0:21,0:8:8.64:0,9,61	0/1:22,0:6:0.78:1,0,4	0/1:20,2:20:26.53:27,0,93	0/1:15,0:14:21.64:22,0,130	0/1:6,1:5:2.72:28,0,3	0/1:22,1:18:94.81:96,0,95	0/1:10,0:9:24.32:24,0,66	0/1:13,10:22:99:127,0,102	0/1:15,0:15:6.55:7,0,88	0/1:4,0:4:17.24:27,0,17	0/1:6,0:6:4.46:22,0,4	0/1:9,0:8:26.08:41,0,26	0/0:10,0:9:3.94:0,4,66	0/0:15,0:15:27.21:0,27,236	0/1:22,0:21:38.76:39,0,236	0/1:17,2:17:4.06:4,0,135	0/1:25,0:18:0.67:1,0,166	0/1:17,8:21:54.75:55,0,137	0/0:6,0:5:2.42:0,2,78	0/1:19,0:18:14.11:14,0,107	0/0:15,2:15:28.96:0,29,161	0/1:10,0:10:5.65:6,0,23	0/0:18,0:16:22.14:0,22,230	0/1:29,2:30:99:114,0,195	0/1:25,2:26:99:99,0,117	0/1:16,1:15:18.83:19,0,43
chr10	39512369	.	TTG	T	5255.52	PASS	AB=0.765;AC=37;AF=0.661;AN=56;BaseQRankSum=12.299;DP=831;FS=1.823;HRun=0;HaplotypeScore=155.6724;InbreedingCoeff=0.4124;MQ=59.35;MQ0=15;MQRankSum=0.294;QD=9.32;ReadPosRankSum=3.023;VQSLOD=4.7035;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:17,17:34:35.51:411,36,0	1/1:1,4:5:12.03:137,12,0	0/0:35,0:15:5.95:0,6,62	0/0:49,0:19:9.48:0,9,98	1/1:12,0:22:2.54:14,3,0	1/1:1,14:16:38.94:426,39,0	0/1:17,18:35:27.36:462,0,27	0/0:38,0:38:21.16:0,21,577	1/1:9,0:22:25.73:146,26,0	0/1:14,14:29:24.57:400,0,25	0/1:8,9:17:27.91:154,0,28	1/1:14,18:33:29.91:343,30,0	1/1:11,0:37:39.60:248,40,0	1/1:6,0:32:18.80:163,19,0	1/1:14,0:35:39.77:196,40,0	1/1:2,0:20:51.13:252,51,0	1/1:11,0:33:45.45:224,45,0	1/1:7,16:22:7.80:375,8,0	0/1:16,2:18:43.85:44,0,133	0/0:31,0:31:22.80:0,23,652	0/0:82,2:84:54.06:0,54,1486	1/1:5,0:18:16.89:84,17,0	0/1:6,13:18:22.51:202,0,23	1/1:16,39:56:78.22:892,78,0	1/1:7,0:26:14.20:70,14,0	0/0:30,0:30:41.91:0,42,688	0/1:17,1:18:11.74:12,0,584	0/1:12,1:13:2.67:3,0,384
chr10	39513566	.	AGTGTGTGTGT	A	12913.64	PASS	AB=0.633;AC=19;AF=0.339;AN=56;BaseQRankSum=3.365;DP=730;FS=0.752;HRun=0;HaplotypeScore=248.5711;InbreedingCoeff=0.9109;MQ=59.89;MQ0=4;MQRankSum=-15.317;QD=52.28;ReadPosRankSum=3.596;VQSLOD=4.5426;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:38:93.25:0,93,2686	0/0:1,0:6:18.05:0,18,484	0/0:44,0:29:69.24:0,69,2593	0/0:39,0:27:55.54:0,56,2551	1/1:14,24:38:51.17:1578,51,0	0/1:8,0:19:5.02:5,0,63	0/0:9,0:23:32.47:0,32,166	0/0:24,0:26:60.21:0,60,2828	1/1:8,16:24:39.13:1214,39,0	0/0:4,0:21:57.19:0,57,1646	0/0:5,0:22:48.16:0,48,1439	0/0:6,0:26:3.33:0,3,143	1/1:6,19:25:54.18:1681,54,0	1/1:8,13:21:42.14:1306,42,0	1/1:6,17:23:36.12:1121,36,0	1/1:7,24:31:60.21:1867,60,0	1/1:5,17:22:35.86:1120,36,0	0/0:7,0:27:63.18:0,63,1781	0/0:22,0:22:33.11:0,33,1621	0/0:19,0:20:48.02:0,48,2234	0/0:54,0:59:99:0,160,7254	1/1:5,14:19:42.14:1269,42,0	0/0:6,0:20:27.12:0,27,144	0/0:5,0:21:16.07:0,16,65	1/1:2,22:25:57.20:1751,57,0	0/0:27,0:29:78.27:0,78,3709	0/0:17,0:19:39.13:0,39,1857	0/0:18,0:19:51.18:0,51,2297
chr10	39513691	.	GC	G	6441.51	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=12.902;DP=658;FS=0.671;HRun=4;HaplotypeScore=71.8073;InbreedingCoeff=0.9835;MQ=83.03;MQ0=0;MQRankSum=-2.565;QD=30.38;ReadPosRankSum=6.014;VQSLOD=4.7837;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:96.26:0,96,1276	0/0:11,0:11:30.08:0,30,402	0/0:26,0:26:56.20:0,56,954	0/0:16,0:16:42.14:0,42,581	1/1:0,16:16:39.12:468,39,0	0/0:20,0:20:60.15:0,60,802	0/0:28,0:28:78.26:0,78,1091	0/0:34,0:34:99:0,99,1372	1/1:1,17:18:48.15:576,48,0	0/0:22,0:22:63.20:0,63,866	0/0:24,0:24:57.13:0,57,743	0/0:29,0:29:87.29:0,87,1217	1/1:2,24:26:66.20:791,66,0	1/1:1,18:19:48.11:576,48,0	1/1:0,26:26:78.24:935,78,0	1/1:0,33:33:93.28:1116,93,0	1/1:1,36:37:90.28:1080,90,0	0/0:24,0:24:72.20:0,72,953	0/0:20,0:20:60.15:0,60,770	0/0:22,0:22:54.11:0,54,670	0/0:46,0:46:99:0,120,1644	1/1:8,14:22:36.11:432,36,0	0/0:19,0:19:48.10:0,48,632	0/0:26,1:26:33.25:0,33,888	1/1:1,14:15:39.12:468,39,0	0/0:27,0:27:78.23:0,78,1045	0/0:17,0:17:48.16:0,48,671	0/0:2,0:2:6.02:0,6,84
chr10	39514016	.	C	CG	6840.13	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-9.236;DP=450;FS=14.564;HRun=0;HaplotypeScore=47.5243;InbreedingCoeff=0.9622;MQ=77.34;MQ0=0;MQRankSum=-4.882;QD=41.96;ReadPosRankSum=1.223;VQSLOD=3.7018;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,153,2109	0/0:7,0:7:18.06:0,18,250	0/0:10,0:9:27:0,27,338	0/0:16,0:16:41.60:0,42,472	1/1:0,5:5:15.05:239,15,0	1/1:1,18:19:51.17:814,51,0	1/1:0,28:28:75.26:1197,75,0	0/0:23,0:23:63.20:0,63,866	1/1:0,8:8:24.08:381,24,0	0/0:14,0:14:33.11:0,33,462	0/0:16,0:16:45.15:0,45,628	1/1:0,19:19:48.14:767,48,0	1/1:0,5:5:15.05:239,15,0	1/1:1,6:7:12.04:191,12,0	1/1:0,7:7:18.06:285,18,0	1/1:0,6:6:15.05:237,15,0	1/1:0,13:13:36.12:571,36,0	0/0:31,0:31:93.31:0,93,1298	0/0:24,0:24:72.23:0,72,991	0/0:17,0:17:48.15:0,48,645	0/0:36,0:36:99:0,103,1427	1/1:0,1:1:3.01:48,3,0	1/1:0,10:10:21.96:337,22,0	1/1:0,23:23:66.23:1054,66,0	1/1:1,11:12:30.10:479,30,0	0/0:12,0:12:33.11:0,33,462	0/0:14,0:14:36.08:0,36,481	0/0:14,0:14:39.11:0,39,524
chr10	39514237	.	T	TG	876.22	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=4.456;DP=501;FS=7.388;HRun=7;HaplotypeScore=63.8779;InbreedingCoeff=0.9302;MQ=93.28;MQ0=0;MQRankSum=-4.282;QD=28.27;ReadPosRankSum=0.735;VQSLOD=4.3025;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:78.11:0,78,752	0/0:6,0:6:9.01:0,9,87	0/0:28,0:28:66.02:0,66,634	0/0:16,0:16:35.91:0,36,329	0/0:14,0:14:30.03:0,30,290	0/0:21,0:21:39.04:0,39,370	0/0:32,0:32:78.11:0,78,753	0/0:25,0:25:57.08:0,57,546	0/0:10,0:10:30.05:0,30,290	0/0:14,0:14:23.97:0,24,220	0/0:6,0:6:9.01:0,9,87	0/0:21,0:21:31.47:0,31,470	1/1:3,14:17:45.10:527,45,0	1/1:0,14:14:39.12:471,39,0	0/0:19,0:19:26.26:0,26,406	0/0:19,0:19:45.06:0,45,435	0/0:32,0:32:69.09:0,69,666	0/0:12,0:12:30.04:0,30,290	0/0:15,0:15:33.04:0,33,319	0/0:13,0:13:27.04:0,27,260	0/0:32,0:32:75.10:0,75,719	0/0:10,0:10:21.03:0,21,203	0/0:18,0:18:42.04:0,42,399	0/0:20,0:20:54.09:0,54,521	0/0:10,0:10:18.02:0,18,173	0/0:15,0:15:36.05:0,36,348	0/0:21,0:21:54.08:0,54,521	0/0:7,0:7:18.03:0,18,174
chr10	39515225	.	AGG	A	9200.67	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=13.673;DP=630;FS=5.919;HRun=2;HaplotypeScore=79.1003;InbreedingCoeff=0.9847;MQ=83.97;MQ0=0;MQRankSum=0.035;QD=45.10;ReadPosRankSum=4.240;VQSLOD=4.7239;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,123,2382	0/0:13,0:13:33.11:0,33,658	0/0:12,0:12:6.50:0,6,450	0/0:26,0:26:58.76:0,59,1120	1/1:0,18:18:54.18:880,54,0	0/0:24,0:24:72.21:0,72,1387	0/0:24,0:24:72.25:0,72,1463	0/0:26,0:26:78.26:0,78,1528	1/1:0,19:19:54.18:880,54,0	0/0:25,0:25:75.26:0,75,1496	0/0:9,0:9:24.08:0,24,470	0/0:19,0:19:57.20:0,57,1157	1/1:0,17:17:48.16:782,48,0	1/1:0,32:32:87.30:1412,87,0	1/1:0,24:24:69.24:1125,69,0	1/1:0,30:30:90.31:1466,90,0	1/1:0,27:27:78.27:1271,78,0	0/0:21,0:21:63.22:0,63,1279	0/0:15,0:15:45.15:0,45,879	0/0:28,0:28:78.27:0,78,1557	0/0:40,0:40:99:0,117,2340	1/1:0,22:22:51.11:799,51,0	0/0:15,0:15:45.15:0,45,908	0/0:12,0:12:36.12:0,36,718	1/1:0,15:15:36.12:586,36,0	0/0:28,0:28:81.25:0,81,1573	0/0:37,0:37:99:0,111,2138	0/0:11,0:11:33.11:0,33,641
chr10	39515358	.	G	GT	4766.64	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-10.353;DP=668;FS=0.000;HRun=1;HaplotypeScore=66.5644;InbreedingCoeff=0.9993;MQ=86.02;MQ0=0;MQRankSum=-2.369;QD=41.09;ReadPosRankSum=3.048;VQSLOD=5.4188;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,45:45:99:1888,126,0	1/1:0,10:10:30.10:440,30,0	0/0:24,0:24:66.21:0,66,852	0/0:21,0:21:54.06:0,54,630	0/0:21,0:21:60.19:0,60,779	0/0:23,0:23:69.21:0,69,881	0/0:40,0:40:99:0,120,1476	0/0:32,0:32:96.30:0,96,1234	0/0:22,0:22:60.19:0,60,776	1/1:1,18:19:51.16:745,51,0	1/1:2,16:18:51.17:750,51,0	0/0:30,0:30:84.27:0,84,1090	0/0:23,0:23:69.22:0,69,891	0/0:20,0:20:57.19:0,57,739	0/0:31,0:30:93.27:0,93,1188	0/0:21,0:21:60.19:0,60,776	0/0:23,0:23:69.20:0,69,879	1/1:1,23:24:63.21:944,63,0	0/0:16,0:16:45.15:0,45,584	0/0:23,0:23:66.20:0,66,841	0/0:39,0:39:99:0,117,1500	0/0:27,0:27:78.18:0,78,970	0/0:12,0:12:33.08:0,33,402	0/0:25,0:25:66.21:0,66,857	0/0:25,0:25:72.23:0,72,935	0/0:22,0:22:63.20:0,63,818	0/0:24,0:24:72.23:0,72,931	0/0:8,0:8:24.08:0,24,312
chr10	39515533	.	C	CTGTG	1682.58	PASS	AB=1.000;AC=42;AF=0.840;AN=50;BaseQRankSum=-1.340;DP=650;FS=3.693;HRun=0;HaplotypeScore=138.1108;InbreedingCoeff=0.1201;MQ=57.79;MQ0=19;MQRankSum=0.198;QD=2.85;ReadPosRankSum=2.116;VQSLOD=2.3444;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:38,0:34:0.01:0,0,0	1/1:14,0:14:1.98:16,2,0	./.	./.	0/1:12,0:11:0:0,0,0	1/1:20,0:19:17.59:151,18,0	1/1:32,0:32:3.34:24,3,0	1/1:18,0:17:1.25:3,1,0	1/1:25,0:25:5.64:54,6,0	1/1:35,0:33:21.13:401,21,0	1/1:11,0:10:3:25,3,0	1/1:20,8:32:0.06:2,0,0	0/1:15,0:15:9.47:9,0,20	0/1:18,0:15:6.61:7,0,13	1/1:29,0:29:3.48:47,3,0	1/1:32,0:30:6.15:53,6,0	0/1:22,0:21:1.53:26,0,2	0/1:13,0:11:0.04:0,0,0	1/1:21,0:20:6.49:101,6,0	0/1:14,0:14:0:0,0,0	1/1:44,0:40:7.41:53,7,0	1/1:22,0:22:2.37:23,2,0	0/1:14,0:14:79.34:79,0,83	1/1:33,11:47:6.49:141,6,0	1/1:17,0:16:6.01:90,6,0	1/1:27,0:26:25.34:227,25,0	1/1:19,0:19:24.30:252,24,0	./.
chr10	39515575	.	G	GTA	1857.54	PASS	AB=0.974;AC=19;AF=0.339;AN=56;BaseQRankSum=-1.512;DP=642;FS=10.911;HRun=0;HaplotypeScore=129.4730;InbreedingCoeff=-0.0434;MQ=46.25;MQ0=36;MQRankSum=2.581;QD=5.09;ReadPosRankSum=0.414;VQSLOD=2.0390;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:38,0:34:3.17:169,3,0	0/1:12,0:12:61.04:61,0,62	0/0:4,0:1:3:0,3,29	0/0:9,0:7:18.04:0,18,187	0/1:19,0:18:6.11:27,0,6	0/1:20,0:16:4.32:4,0,96	0/0:30,0:28:35.36:0,35,298	0/1:30,0:24:66.97:232,0,67	0/0:24,0:24:8.45:0,8,51	0/1:30,0:28:82.69:292,0,83	1/1:14,0:12:14.88:123,15,0	0/0:29,0:29:36.36:0,36,275	0/0:21,0:21:14.64:0,15,168	0/0:23,0:20:30.15:0,30,228	0/1:27,0:27:57.07:104,0,57	0/0:35,0:33:10.43:0,10,87	0/1:19,0:17:26.26:26,0,162	0/1:11,0:9:25.34:25,0,61	0/1:15,0:12:51.17:88,0,51	1/1:18,0:18:23.97:199,24,0	0/1:48,0:39:99:199,0,111	0/0:23,0:22:12.06:0,12,98	0/0:18,0:17:3.37:0,3,228	0/0:43,0:43:30.24:0,30,275	0/0:18,0:16:22.55:0,23,265	0/1:14,12:27:99:162,0,185	0/1:28,0:26:99:249,0,119	0/1:8,0:5:0.87:64,0,1
chr10	39515583	.	GTA	G	1257.69	PASS	AB=0.987;AC=22;AF=0.393;AN=56;BaseQRankSum=4.232;DP=660;FS=27.596;HRun=0;HaplotypeScore=134.7823;InbreedingCoeff=0.1008;MQ=47.22;MQ0=33;MQRankSum=-2.137;QD=3.54;ReadPosRankSum=-1.095;VQSLOD=1.1094;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:39,1:36:26.82:0,27,236	0/1:12,0:12:8.19:8,0,105	0/1:10,0:5:8.97:9,0,92	0/0:15,0:11:25.12:0,25,219	0/0:18,1:18:18.49:0,18,82	0/1:19,1:17:57.56:58,0,101	0/0:28,0:26:10.73:0,11,232	0/0:30,0:24:58.87:0,59,456	0/1:26,0:26:9.39:9,0,24	0/1:37,0:35:49.88:50,0,534	0/1:16,0:14:1.88:2,0,154	0/0:27,0:27:10.28:0,10,320	1/1:17,0:17:17.80:143,18,0	1/1:19,0:16:32.45:238,32,0	1/1:27,0:27:40.08:303,40,0	1/1:34,0:32:1.20:64,1,0	1/1:17,3:18:12.64:223,13,0	0/1:11,0:10:13.10:13,0,86	0/0:19,0:15:41.01:0,41,328	0/0:17,3:20:35.96:0,36,319	0/0:42,0:33:19.33:0,19,332	0/1:26,0:25:9.70:34,0,10	0/1:15,0:15:17.20:17,0,298	0/0:44,0:44:27.63:0,28,394	0/0:21,0:19:4.01:0,4,313	0/1:30,1:30:99:182,0,251	0/1:24,2:24:77.34:77,0,293	0/1:8,0:5:4.27:4,0,68
chr10	39515589	.	G	GTGTGTA	1311.71	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=1.037;DP=677;FS=0.000;HRun=0;HaplotypeScore=179.5990;InbreedingCoeff=0.5428;MQ=50.04;MQ0=26;MQRankSum=-0.801;QD=8.52;ReadPosRankSum=2.259;VQSLOD=2.6598;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:34:30.96:0,31,503	0/1:11,0:11:0.98:1,0,227	0/0:17,0:11:23.10:0,23,359	0/0:19,0:13:39.12:0,39,700	0/0:5,14:22:0:0,0,1	0/0:21,0:18:33.01:0,33,462	0/0:28,0:26:45.56:0,46,784	0/0:29,0:25:69.01:0,69,980	1/1:6,19:28:2.62:101,3,0	0/0:39,0:38:35.42:0,35,1334	0/0:15,0:13:21.07:0,21,363	0/0:28,0:28:42.11:0,42,857	0/0:12,0:12:20.81:0,21,133	0/0:14,0:13:23.56:0,24,190	1/1:28,0:28:46.85:898,47,0	1/1:11,22:38:2.50:38,2,0	0/1:19,0:18:3.32:397,0,3	0/0:11,0:10:17.90:0,18,255	0/0:20,0:16:39.05:0,39,651	0/0:23,0:23:45.12:0,45,725	0/0:42,0:34:36.54:0,37,921	0/0:4,20:25:4.24:0,4,10	0/0:16,0:16:12.83:0,13,547	0/0:46,0:46:50.93:0,51,907	0/0:21,0:19:50.74:0,51,910	0/1:28,0:27:8.11:8,0,622	0/0:28,0:27:13.36:0,13,700	0/0:8,0:5:13.29:0,13,174
chr10	39516322	.	AACACAC	A	1900.35	PASS	AB=0.917;AC=28;AF=0.519;AN=54;BaseQRankSum=6.376;DP=590;FS=0.000;HRun=0;HaplotypeScore=140.9641;InbreedingCoeff=0.3630;MQ=68.13;MQ0=16;MQRankSum=-3.718;QD=5.43;ReadPosRankSum=2.431;VQSLOD=2.5575;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:19,9:29:14.47:94,0,14	1/1:6,4:10:9.03:160,9,0	./.	0/0:42,0:23:0:0,0,0	1/1:22,0:21:3.01:41,3,0	0/1:22,0:21:14.47:78,0,14	1/1:23,0:23:14.45:158,14,0	0/0:26,0:25:12.03:0,12,213	1/1:12,0:12:3.09:155,3,0	1/1:16,0:19:6.42:65,6,0	1/1:10,3:14:9.08:90,9,0	1/1:14,0:14:3.01:43,3,0	0/0:8,0:16:6.02:0,6,127	0/0:7,0:13:14.40:0,14,231	1/1:22,0:22:9.03:125,9,0	1/1:21,0:20:27.08:361,27,0	0/1:35,0:35:11.57:207,0,12	0/1:13,5:19:15.42:209,0,15	0/0:15,0:18:15.92:0,16,325	0/0:10,0:17:7.16:0,7,192	0/0:28,0:27:28.62:0,29,630	1/1:27,0:27:8.99:125,9,0	1/1:20,0:20:6.13:87,6,0	0/1:25,0:25:24.08:53,0,24	0/1:16,0:15:26.84:27,0,158	0/0:11,0:14:21.07:0,21,562	0/0:19,0:18:18.06:0,18,444	0/0:5,0:6:12.02:0,12,276
chr10	39516360	.	CACACACACAG	C	4075.15	PASS	AB=0.985;AC=21;AF=0.375;AN=56;BaseQRankSum=4.727;DP=611;FS=0.454;HRun=0;HaplotypeScore=164.7071;InbreedingCoeff=0.5377;MQ=59.94;MQ0=17;MQRankSum=-4.571;QD=14.15;ReadPosRankSum=4.155;VQSLOD=1.8686;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:38,0:36:22.08:22,0,315	0/0:6,0:6:11.98:0,12,111	0/0:34,0:19:56.85:0,57,569	0/0:38,0:19:54.41:0,54,509	0/1:11,1:12:3:215,0,3	1/1:22,0:21:5.06:315,5,0	1/1:20,3:22:7.40:534,7,0	0/0:26,0:25:69.10:0,69,1047	1/1:11,2:13:23.91:492,24,0	0/0:26,0:25:39.02:0,39,856	0/0:14,0:14:27.90:0,28,363	0/1:22,0:21:16.17:36,0,16	0/0:17,0:16:18.49:0,18,322	0/0:16,0:16:24.07:0,24,586	1/1:6,16:22:7.19:298,7,0	1/1:3,20:23:27.09:850,27,0	1/1:3,26:29:2.20:542,2,0	0/0:20,0:20:20.03:0,20,328	0/0:16,0:16:41.88:0,42,914	0/0:16,0:16:16.17:0,16,504	0/0:42,0:39:80.37:0,80,1405	1/1:3,21:24:8.99:301,9,0	1/1:20,0:20:5.92:83,6,0	0/1:25,0:25:16.11:323,0,16	0/1:15,0:14:63.61:64,0,283	0/0:18,0:18:54.11:0,54,1338	0/0:18,0:17:45.04:0,45,1100	0/0:16,0:16:47.92:0,48,768
chr10	39516362	.	CACACACAG	C	4041.87	PASS	AB=1.000;AC=27;AF=0.482;AN=56;BaseQRankSum=5.935;DP=583;FS=0.430;HRun=0;HaplotypeScore=141.5036;InbreedingCoeff=0.6031;MQ=60.79;MQ0=15;MQRankSum=-4.362;QD=12.95;ReadPosRankSum=4.178;VQSLOD=2.5823;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:34,0:32:17.69:18,0,230	0/1:5,0:5:0.19:0,0,29	0/0:34,0:19:56.85:0,57,569	0/0:36,0:18:51.40:0,51,478	1/1:8,0:9:20.91:201,21,0	1/1:15,3:18:21.02:455,21,0	1/1:20,3:22:50.91:653,51,0	0/0:26,0:26:66.05:0,66,853	1/1:11,0:11:23.76:341,24,0	0/1:23,0:22:30.55:31,0,444	0/0:12,0:12:20.30:0,20,204	1/1:3,19:21:2.93:87,3,0	0/0:17,0:16:18:0,18,278	0/0:16,0:16:21.03:0,21,402	1/1:18,0:18:7.94:200,8,0	1/1:22,0:22:27.09:592,27,0	1/1:28,0:28:4.94:367,5,0	0/1:19,0:19:32.66:33,0,223	0/0:16,0:16:44.88:0,45,794	0/0:16,0:16:16.17:0,16,413	0/0:44,0:41:89.32:0,89,1261	1/1:21,0:21:8.99:202,9,0	1/1:2,14:16:8.93:209,9,0	1/1:25,3:28:42.72:604,43,0	0/1:15,0:14:49.68:50,0,180	0/0:19,0:19:56.13:0,56,1202	0/0:19,0:18:47.99:0,48,896	0/0:16,0:16:47.92:0,48,691
chr10	39516368	.	CAG	C	2075.36	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=5.606;DP=575;FS=0.441;HRun=0;HaplotypeScore=101.7423;InbreedingCoeff=0.9179;MQ=64.69;MQ0=12;MQRankSum=-4.291;QD=9.35;ReadPosRankSum=3.952;VQSLOD=3.3694;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:30:37.07:0,37,295	0/0:5,0:5:8.60:0,9,47	0/0:35,0:20:59.85:0,60,597	0/0:37,0:21:59.79:0,60,544	1/1:8,0:8:20.86:158,21,0	1/1:17,0:17:41.88:337,42,0	1/1:24,0:24:59.70:472,60,0	0/0:33,0:33:78.05:0,78,736	1/1:12,0:12:26.82:206,27,0	0/0:21,0:20:46.45:0,46,388	0/0:10,0:10:22.14:0,22,153	1/1:21,0:20:2.86:26,3,0	0/0:16,0:16:17.99:0,18,164	0/0:14,0:14:18.02:0,18,187	1/1:17,0:17:8.74:76,9,0	1/1:22,0:22:26.67:216,27,0	1/1:28,0:28:14.64:140,15,0	0/0:19,0:19:44.49:0,44,319	0/0:20,0:20:53.82:0,54,498	0/0:13,0:13:15.65:0,16,175	0/0:43,0:40:81.81:0,82,727	1/1:21,0:21:8.98:77,9,0	1/1:16,0:16:8.92:69,9,0	1/1:24,0:24:57.19:449,57,0	1/1:3,9:11:6:67,6,0	0/0:20,0:20:51.07:0,51,537	0/0:19,0:18:40.50:0,40,325	0/0:16,0:16:47.90:0,48,439
chr10	39516527	.	G	GTGTTCTACCTACGTA	8150.18	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-2.726;DP=692;FS=7.108;HRun=0;HaplotypeScore=271.3764;InbreedingCoeff=0.9839;MQ=90.66;MQ0=0;MQRankSum=-10.380;QD=166.33;ReadPosRankSum=0.500;VQSLOD=4.1297;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,135,5683	0/0:5,0:5:15.05:0,15,574	0/0:35,0:35:93.32:0,93,3559	0/0:26,0:26:75.25:0,75,2132	0/0:26,0:26:78.25:0,78,3078	0/0:31,0:31:75.24:0,75,3050	0/0:18,0:18:48.14:0,48,1851	0/0:27,0:27:66.21:0,66,2375	0/0:30,0:30:84.29:0,84,3425	0/0:23,0:23:66.22:0,66,2456	0/0:18,0:18:48.14:0,48,1743	0/0:27,0:27:72.25:0,72,2995	1/1:11,10:24:51.18:3201,51,0	1/1:11,14:25:72.25:4949,72,0	0/0:28,0:28:81.26:0,81,3268	0/0:23,0:23:60.20:0,60,2362	0/0:31,0:31:81.28:0,81,3467	0/0:18,0:18:51.16:0,51,1940	0/0:23,0:23:54.19:0,54,2207	0/0:17,0:17:51.18:0,51,2152	0/0:34,0:34:99:0,99,4027	0/0:32,0:32:87.27:0,87,3125	0/0:19,0:19:51.16:0,51,1922	0/0:27,0:27:60.21:0,60,2519	0/0:17,0:17:51.15:0,51,2048	0/0:24,0:24:72.25:0,72,2781	0/0:26,0:26:63.22:0,63,2532	0/0:5,0:5:15.05:0,15,588
chr10	39516664	.	CAGGT	C	7763.01	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=13.704;DP=599;FS=2.073;HRun=0;HaplotypeScore=100.6542;InbreedingCoeff=0.9991;MQ=80.70;MQ0=0;MQRankSum=-2.836;QD=49.76;ReadPosRankSum=3.090;VQSLOD=5.9488;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:84.29:0,84,2313	0/0:17,0:17:51.18:0,51,1405	0/0:20,0:20:60.21:0,60,1595	0/0:13,0:13:39.13:0,39,1052	1/1:1,20:21:51.10:915,51,0	0/0:30,0:30:90.31:0,90,2413	0/0:15,0:15:45.13:0,45,1125	0/0:19,0:19:57.20:0,57,1542	1/1:1,27:28:69.24:1377,69,0	0/0:32,0:32:93.32:0,93,2492	0/0:19,0:19:51.18:0,51,1380	0/0:16,0:16:48.16:0,48,1305	0/0:34,0:34:99:0,102,2763	0/0:19,0:19:57.20:0,57,1561	1/1:2,31:33:87.10:1716,87,0	1/1:0,23:23:60.21:1186,60,0	1/1:1,21:22:54.19:1072,54,0	0/0:16,0:16:48.16:0,48,1276	0/0:15,0:15:45.15:0,45,1247	0/0:23,0:23:69.24:0,69,1906	0/0:11,0:11:33.11:0,33,918	1/1:0,29:29:75.26:1497,75,0	0/0:20,0:20:60.19:0,60,1604	0/0:18,0:18:54.17:0,54,1399	0/0:16,0:16:45.15:0,45,1239	0/0:26,0:26:78.27:0,78,2116	0/0:29,0:29:87.30:0,87,2400	0/0:7,0:7:21.07:0,21,584
chr10	39516861	.	AAT	A	2011.36	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.786;DP=760;FS=5.328;HRun=0;HaplotypeScore=112.2526;InbreedingCoeff=0.9995;MQ=80.89;MQ0=0;MQRankSum=-3.354;QD=37.25;ReadPosRankSum=2.765;VQSLOD=6.0130;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,129,2408	0/0:10,0:10:30.10:0,30,579	0/0:32,0:32:87.28:0,87,1558	0/0:23,0:23:66.18:0,66,1068	0/0:32,0:32:90.31:0,90,1725	0/0:29,0:29:87.30:0,87,1648	0/0:21,0:21:60.21:0,60,1159	0/0:31,0:31:93.32:0,93,1797	0/0:38,0:38:99:0,114,2069	0/0:36,0:36:99:0,108,2047	0/0:17,0:17:51.17:0,51,984	0/0:22,0:22:66.23:0,66,1273	1/1:1,27:28:69.19:1030,69,0	1/1:1,25:26:72.24:1103,72,0	0/0:31,0:31:93.29:0,93,1729	0/0:35,0:35:99:0,105,1992	0/0:27,0:27:81.28:0,81,1564	0/0:21,0:21:60.21:0,60,1145	0/0:18,0:18:51.17:0,51,985	0/0:27,0:27:81.26:0,81,1517	0/0:26,0:26:78.25:0,78,1471	0/0:29,0:29:87.26:0,87,1609	0/0:24,0:24:69.24:0,69,1331	0/0:30,0:30:90.31:0,90,1715	0/0:25,0:25:72.23:0,72,1343	0/0:38,0:38:99:0,114,2195	0/0:29,0:29:84.29:0,84,1586	0/0:10,0:10:30.10:0,30,579
chr10	39519309	.	C	CAA	7509	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=2.115;DP=629;FS=1.884;HRun=8;HaplotypeScore=89.3411;InbreedingCoeff=0.9952;MQ=60.05;MQ0=7;MQRankSum=1.510;QD=27.81;ReadPosRankSum=2.708;VQSLOD=4.9235;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:57.07:0,57,624	0/0:11,0:11:30.08:0,30,334	0/0:16,0:8:12.02:0,12,133	0/0:21,0:12:29.52:0,30,280	1/1:6,0:32:60:565,60,0	1/1:3,19:22:51.17:810,51,0	1/1:0,12:12:33.11:524,33,0	0/0:30,0:29:69.16:0,69,769	1/1:7,0:25:45.08:439,45,0	0/0:28,0:28:66.16:0,66,727	0/0:17,0:17:45.11:0,45,502	1/1:1,22:24:54.14:810,54,0	1/1:4,17:21:48.12:734,48,0	1/1:1,13:13:27.09:429,27,0	1/1:2,1:26:59.60:584,60,0	1/1:1,0:18:42.07:401,42,0	1/1:2,0:24:63.11:611,63,0	0/0:33,0:33:90.18:0,90,976	0/0:25,0:24:66.17:0,66,735	0/0:34,0:34:96.26:0,96,1070	0/0:18,0:18:48.12:0,48,535	1/1:1,1:12:27:248,27,0	1/1:5,16:22:51.17:783,51,0	1/1:4,13:17:36.12:571,36,0	0/0:20,0:20:54.12:0,54,593	0/0:34,0:34:93.22:0,93,1021	0/0:35,0:35:99:0,99,1104	0/0:11,0:11:33.09:0,33,368
chr10	39519908	.	G	GCC	8759.50	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=7.649;DP=606;FS=10.782;HRun=8;HaplotypeScore=92.8261;InbreedingCoeff=0.9984;MQ=71.73;MQ0=0;MQRankSum=-0.602;QD=31.06;ReadPosRankSum=2.973;VQSLOD=3.9207;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,108,1202	0/0:9,0:9:18.03:0,18,201	0/0:14,0:14:29.89:0,30,300	0/0:22,0:20:35.51:0,36,356	1/1:1,16:17:45.15:695,45,0	1/1:3,17:20:48.16:762,48,0	1/1:4,26:30:62.88:977,63,0	0/0:29,0:29:75.16:0,75,820	1/1:1,20:22:57.19:905,57,0	0/0:19,0:19:47.85:0,48,513	0/0:16,0:16:39.09:0,39,434	1/1:3,15:19:44.64:675,45,0	1/1:6,0:21:36.88:125,37,0	1/1:4,0:25:47.29:163,47,0	1/1:5,28:33:69.24:1095,69,0	1/1:5,21:26:63.17:972,63,0	1/1:2,16:18:39.13:619,39,0	0/0:19,0:19:51.13:0,51,569	0/0:16,0:15:33.08:0,33,368	0/0:17,0:17:51.14:0,51,568	0/0:37,0:37:99:0,101,1108	1/1:2,9:11:27.09:429,27,0	1/1:0,13:14:29.59:437,30,0	1/1:3,23:26:57.19:905,57,0	0/0:21,0:21:57.12:0,57,625	0/0:29,0:29:78.20:0,78,869	0/0:27,0:27:67.20:0,67,766	0/0:11,0:11:30.08:0,30,334
chr10	39520841	.	GGT	G	396.62	PASS	AB=0.897;AC=27;AF=0.614;AN=44;BaseQRankSum=1.433;DP=539;FS=5.859;HRun=0;HaplotypeScore=72.6190;InbreedingCoeff=0.3053;MQ=60.75;MQ0=7;MQRankSum=0.869;QD=1.43;ReadPosRankSum=2.091;VQSLOD=0.4995;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:0:0,0,0	1/1:8,0:8:2.68:11,3,0	./.	./.	1/1:16,0:15:2.99:25,3,0	./.	1/1:34,0:41:5.46:28,5,0	0/0:21,0:21:0.89:0,1,2	1/1:16,0:16:2.95:24,3,0	./.	1/1:18,0:16:2.84:14,3,0	0/0:10,0:10:6.01:0,6,67	1/1:11,0:11:6.02:64,6,0	0/0:19,0:19:7.94:0,8,110	0/1:15,1:16:22.87:23,0,71	1/1:15,2:18:8.86:78,9,0	1/1:33,7:39:9.02:96,9,0	0/1:12,6:17:5.95:82,0,6	1/1:17,0:17:2.84:14,3,0	./.	0/0:50,0:48:0:0,0,0	1/1:10,0:9:3.01:32,3,0	0/1:11,0:10:0.02:0,0,0	0/0:33,0:32:32.92:0,33,287	1/1:21,0:24:2.84:14,3,0	0/0:17,0:17:0.47:0,0,1	./.	1/1:7,0:11:2.68:13,3,0
chr10	39522151	.	C	CG	456.68	PASS	AB=1.000;AC=5;AF=0.093;AN=54;BaseQRankSum=-1.639;DP=246;FS=1.081;HRun=6;HaplotypeScore=29.4354;InbreedingCoeff=0.5111;MQ=70.19;MQ0=0;MQRankSum=-0.476;QD=19.86;ReadPosRankSum=0.755;VQSLOD=2.3567;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:45.07:0,45,448	0/0:6,0:6:14.57:0,15,118	0/0:5,0:4:7.25:0,7,61	0/1:6,0:6:2.03:2,0,33	0/0:4,0:4:9.02:0,9,91	./.	0/0:23,0:24:53.11:0,53,510	0/0:9,0:9:12.01:0,12,112	0/0:4,0:4:9.01:0,9,92	0/0:6,0:6:15.03:0,15,153	0/0:4,0:4:12.03:0,12,122	0/0:5,0:5:9.02:0,9,92	1/1:0,3:3:6.02:75,6,0	1/1:2,12:14:39.12:490,39,0	0/0:3,0:3:9.02:0,9,92	0/0:2,0:2:6:0,6,55	0/0:22,0:22:48.10:0,48,488	0/0:9,0:9:18.01:0,18,175	0/0:4,0:4:12.02:0,12,116	0/0:2,0:2:3:0,3,31	0/0:46,0:46:99:0,108,1098	0/0:3,0:3:9.01:0,9,85	0/0:3,0:3:8.98:0,9,78	0/0:13,0:13:36.01:0,36,354	0/0:9,0:9:23.98:0,24,228	0/0:17,0:17:48.11:0,48,488	0/0:1,0:1:1.25:0,1,3	0/0:4,0:4:6.01:0,6,61
chr10	39523612	.	CT	C	5022.12	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=11.699;DP=911;FS=5.278;HRun=2;HaplotypeScore=91.0892;InbreedingCoeff=0.9929;MQ=91.68;MQ0=0;MQRankSum=-6.893;QD=36.39;ReadPosRankSum=2.908;VQSLOD=5.3815;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:71,0:71:99:0,214,3135	0/0:18,0:18:54.17:0,54,789	0/0:39,0:39:99:0,114,1664	0/0:36,0:36:86.88:0,87,1287	0/0:35,0:35:99:0,102,1507	1/1:0,23:23:69.22:896,69,0	1/1:0,25:25:63.20:818,63,0	0/0:34,0:34:99:0,102,1509	0/0:33,0:33:99:0,99,1484	0/0:38,0:38:99:0,114,1707	0/0:24,0:24:66.21:0,66,968	1/1:2,31:33:93.30:1208,93,0	0/0:36,0:36:99:0,102,1491	0/0:37,0:37:99:0,111,1636	0/0:35,0:35:99:0,99,1483	0/0:37,0:37:99:0,111,1643	0/0:27,0:27:78.24:0,78,1145	0/0:32,0:32:93.31:0,93,1387	0/0:21,0:21:57.18:0,57,834	0/0:43,0:43:99:0,129,1893	0/0:49,0:49:99:0,147,2202	0/0:37,0:37:99:0,102,1487	1/1:2,23:25:65.98:854,66,0	1/1:0,32:32:96.31:1247,96,0	0/0:29,0:29:87.27:0,87,1281	0/0:35,0:35:99:0,105,1539	0/0:22,0:22:66.22:0,66,989	0/0:5,0:5:12.04:0,12,180
chr10	39524573	.	G	GA	9505.99	PASS	AB=0.941;AC=35;AF=0.625;AN=56;BaseQRankSum=-12.387;DP=565;FS=4.415;HRun=9;HaplotypeScore=52.1615;InbreedingCoeff=0.8963;MQ=76.60;MQ0=0;MQRankSum=-0.971;QD=24.56;ReadPosRankSum=1.112;VQSLOD=5.7210;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,38:41:96.26:1062,96,0	1/1:0,7:7:18.05:199,18,0	0/1:15,1:16:15.29:15,0,115	0/0:14,0:13:29.97:0,30,256	1/1:6,16:22:42.03:438,42,0	1/1:2,22:24:57.11:617,57,0	1/1:1,20:23:50.97:544,51,0	0/0:17,0:17:35.96:0,36,312	1/1:0,18:19:50.97:545,51,0	1/1:0,14:14:42.11:465,42,0	1/1:4,17:21:54.13:586,54,0	1/1:1,21:22:51.14:564,51,0	0/0:17,0:17:41.97:0,42,365	0/0:19,0:19:44.95:0,45,384	1/1:2,19:21:51.14:564,51,0	1/1:2,17:19:45.12:498,45,0	1/1:6,34:41:76.08:1050,76,0	1/1:0,27:28:75.02:801,75,0	0/0:21,0:21:38.95:0,39,335	0/0:19,0:19:44.98:0,45,389	0/0:23,0:23:59.95:0,60,515	1/1:4,14:18:42.11:465,42,0	1/1:2,12:14:33.09:365,33,0	1/1:3,17:20:42.11:462,42,0	1/1:3,13:16:24.06:266,24,0	0/0:22,2:24:2.51:0,3,434	0/0:12,0:12:32.97:0,33,282	0/0:12,0:12:35.99:0,36,313
chr10	39525276	.	CTTCAGGTCCCCTTGAG	C	9126.97	PASS	AB=0.792;AC=10;AF=0.179;AN=56;BaseQRankSum=13.083;DP=668;FS=1.519;HRun=0;HaplotypeScore=298.2589;InbreedingCoeff=0.7549;MQ=79.06;MQ0=0;MQRankSum=-11.357;QD=71.87;ReadPosRankSum=0.620;VQSLOD=4.2949;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,21:27:51.18:2316,51,0	1/1:0,9:9:24.08:1111,24,0	0/0:22,0:22:52.69:0,53,3156	0/0:17,0:17:45.15:0,45,2386	0/0:25,0:25:75.26:0,75,5478	0/0:32,0:32:96.33:0,96,6919	0/0:33,0:33:93.32:0,93,5749	0/0:23,0:23:69.24:0,69,4504	0/0:30,0:30:90.31:0,90,6532	1/1:7,24:31:72.23:2918,72,0	1/1:1,11:12:27.09:1255,27,0	0/0:24,0:24:72.25:0,72,5433	0/0:23,0:23:66.23:0,66,5060	0/0:18,0:18:54.19:0,54,3874	0/0:34,0:34:99:0,99,6915	0/0:25,0:25:72.23:0,72,5026	0/0:32,0:32:93.30:0,93,6428	0/1:9,14:23:99:1462,0,193	0/0:15,0:15:45.15:0,45,3043	0/0:25,0:25:72.25:0,72,4963	0/0:39,0:39:99:0,111,8236	0/0:19,0:19:54.19:0,54,4029	0/0:22,0:22:60.21:0,60,4669	0/0:29,0:29:84.29:0,84,5850	0/0:14,0:14:42.14:0,42,2970	0/1:24,1:25:65.52:66,0,5340	0/0:33,0:33:96.33:0,96,7247	0/0:7,0:7:21.07:0,21,1425
chr10	39526630	.	AG	A	3192.53	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=12.767;DP=684;FS=10.930;HRun=5;HaplotypeScore=98.8510;InbreedingCoeff=0.9997;MQ=86.45;MQ0=0;MQRankSum=-1.899;QD=29.84;ReadPosRankSum=1.343;VQSLOD=3.2071;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,111,1500	0/0:11,0:11:33.11:0,33,446	0/0:32,0:31:78.15:0,78,999	0/0:25,0:24:60.19:0,60,795	0/0:10,0:10:27.08:0,27,352	1/1:1,18:19:54.15:612,54,0	1/1:1,23:24:66.19:749,66,0	0/0:34,0:34:87.29:0,87,1187	0/0:26,0:26:78.25:0,78,1049	0/0:17,0:17:48.15:0,48,643	0/0:17,0:17:51.17:0,51,697	1/1:0,21:21:57.16:646,57,0	0/0:34,0:34:90.30:0,90,1229	0/0:20,0:20:60.17:0,60,788	0/0:28,0:28:81.27:0,81,1104	0/0:27,0:27:78.25:0,78,1050	0/0:32,0:32:90.30:0,90,1231	0/0:29,0:29:81.18:0,81,1044	0/0:19,0:19:57.18:0,57,766	0/0:23,0:23:63.19:0,63,842	0/0:47,0:47:99:0,135,1808	0/0:16,0:16:42.13:0,42,553	1/1:0,21:21:57.16:646,57,0	1/1:0,22:22:63.18:715,63,0	0/0:20,0:21:60.02:0,60,778	0/0:28,0:28:81.26:0,81,1085	0/0:27,0:27:72.21:0,72,951	0/0:14,0:14:42.14:0,42,574
chr10	39530029	.	C	CT	11345.79	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=7.945;DP=675;FS=4.761;HRun=2;HaplotypeScore=105.1433;InbreedingCoeff=0.9975;MQ=76.52;MQ0=0;MQRankSum=-1.006;QD=40.38;ReadPosRankSum=0.519;VQSLOD=4.4517;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,41:42:99:1664,117,0	1/1:0,7:7:21.07:302,21,0	0/0:16,0:16:42.11:0,42,505	0/0:11,0:11:18.31:0,18,213	1/1:0,16:16:48.12:670,48,0	0/0:14,0:14:42.14:0,42,545	0/0:29,0:29:87.28:0,87,1130	0/0:32,0:32:84.26:0,84,1068	1/1:1,22:23:66.19:931,66,0	1/1:1,14:15:45.12:624,45,0	1/1:0,10:10:30.10:434,30,0	0/0:30,0:30:84.27:0,84,1090	0/0:18,0:18:54.16:0,54,687	0/0:42,0:42:99:0,123,1580	1/1:3,41:44:99:1828,129,0	1/1:1,41:42:99:1676,117,0	1/1:2,21:22:63.21:911,63,0	1/1:0,28:28:78.26:1130,78,0	0/0:21,0:21:60.17:0,60,750	0/0:7,0:7:21.07:0,21,268	0/0:51,0:51:99:0,150,1917	1/1:0,10:10:26.87:391,27,0	0/0:13,0:13:30.10:0,30,389	0/0:32,0:32:96.31:0,96,1246	1/1:1,20:21:54.18:785,54,0	0/0:31,0:31:87.19:0,87,1094	0/0:29,0:29:78.23:0,78,997	0/0:18,0:18:51.14:0,51,646
chr10	39532453	.	TA	T	8451.06	PASS	AB=0.925;AC=36;AF=0.643;AN=56;BaseQRankSum=10.598;DP=618;FS=1.054;HRun=10;HaplotypeScore=69.5438;InbreedingCoeff=0.8648;MQ=77.98;MQ0=0;MQRankSum=-2.795;QD=20.66;ReadPosRankSum=4.589;VQSLOD=5.6145;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,25:27:62.02:527,62,0	1/1:1,8:9:23.99:208,24,0	0/1:14,2:17:15.72:16,0,263	0/1:12,0:12:5.21:5,0,188	1/1:2,25:27:71.97:625,72,0	1/1:0,25:25:68.99:599,69,0	1/1:3,26:30:77.01:657,77,0	0/0:31,1:32:49.12:0,49,755	1/1:0,12:13:35.03:293,35,0	1/1:3,22:25:65.95:573,66,0	1/1:3,14:17:35.98:313,36,0	1/1:2,25:27:71.97:625,72,0	0/0:16,0:16:42.11:0,42,464	0/0:19,0:19:51.11:0,51,553	1/1:3,20:23:56.99:495,57,0	1/1:5,23:28:68.97:599,69,0	1/1:1,16:17:47.99:417,48,0	1/1:0,21:21:56.99:495,57,0	0/0:24,0:24:66.16:0,66,715	0/0:23,0:24:56.99:0,57,612	0/0:27,0:27:60.13:0,60,645	1/1:1,19:20:53.99:469,54,0	1/1:1,21:22:59.55:520,60,0	1/1:6,20:26:56.97:495,57,0	1/1:2,21:23:59.98:521,60,0	0/0:27,0:27:69.16:0,69,747	0/0:26,0:27:81.03:0,81,865	0/0:13,0:13:30.24:0,30,353
chr10	39532960	.	GTAAA	G	4959.88	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=12.206;DP=702;FS=2.431;HRun=0;HaplotypeScore=115.5381;InbreedingCoeff=0.9995;MQ=77.50;MQ0=0;MQRankSum=-1.842;QD=40.65;ReadPosRankSum=4.347;VQSLOD=5.3947;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,148,3798	0/0:11,0:11:30.10:0,30,781	0/0:21,0:21:54.18:0,54,1225	0/0:15,0:14:30.89:0,31,625	0/0:19,0:19:48.16:0,48,1253	1/1:0,15:15:39.13:709,39,0	1/1:4,23:27:45.15:817,45,0	0/0:33,0:33:84.29:0,84,2153	0/0:27,0:27:81.24:0,81,2012	0/0:31,0:31:81.28:0,81,2116	0/0:18,0:18:51.18:0,51,1335	1/1:4,31:35:87.30:1580,87,0	0/0:34,0:34:93.32:0,93,2409	0/0:25,0:25:63.22:0,63,1620	0/0:45,0:45:99:0,132,3406	0/0:29,0:29:75.26:0,75,1961	0/0:23,0:23:69.24:0,69,1808	0/0:23,0:23:63.22:0,63,1647	0/0:20,0:20:54.17:0,54,1310	0/0:19,0:19:51.15:0,51,1226	0/0:26,0:26:75.23:0,75,1795	0/0:19,0:19:54.10:0,54,1297	1/1:3,19:22:54.01:981,54,0	1/1:3,20:23:48.16:873,48,0	0/0:20,0:20:54.19:0,54,1388	0/0:35,0:35:90.30:0,90,2228	0/0:27,0:27:78.27:0,78,2036	0/0:10,0:10:27.09:0,27,707
chr10	39533044	.	A	AAC	11211.78	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-2.659;DP=884;FS=20.940;HRun=0;HaplotypeScore=126.2101;InbreedingCoeff=0.9996;MQ=67.43;MQ0=4;MQRankSum=-2.483;QD=28.97;ReadPosRankSum=1.547;VQSLOD=4.8176;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,1:41:72.05:672,72,0	1/1:3,0:15:33.02:297,33,0	0/0:38,0:33:50.74:0,51,591	0/0:37,0:34:22.79:0,23,496	1/1:5,23:30:60.20:966,60,0	0/0:16,0:16:39.12:0,39,480	0/0:31,0:31:48.17:0,48,772	0/0:30,0:30:63.19:0,63,758	1/1:8,22:30:51.17:832,51,0	1/1:14,0:43:96.05:880,96,0	1/1:5,2:26:51.04:484,51,0	0/0:30,0:30:81.22:0,81,968	0/0:29,0:29:77.95:0,78,910	0/0:37,0:38:99:0,105,1244	1/1:6,33:37:56.39:1414,56,0	1/1:7,36:42:65.40:1577,65,0	1/1:5,28:33:85.53:1359,86,0	1/1:6,0:30:69.04:625,69,0	0/0:19,0:19:36.05:0,36,443	0/0:24,0:24:66.16:0,66,767	0/0:37,0:39:99:0,102,1193	1/1:6,24:30:66.14:1043,66,0	0/0:36,0:36:96.29:0,96,1170	0/0:34,0:34:99:0,99,1178	1/1:2,25:27:66.22:1063,66,0	0/0:35,0:37:66.55:0,67,1038	0/0:33,0:34:90.06:0,90,1038	0/0:25,0:25:66.19:0,66,799
chr10	39533342	.	GT	G	100.67	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.524;DP=786;FS=16.595;HRun=1;HaplotypeScore=99.6531;InbreedingCoeff=0.9958;MQ=87.43;MQ0=1;MQRankSum=-4.512;QD=11.19;ReadPosRankSum=0.234;VQSLOD=0.6170;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:67,0:67:99:0,199,3156	0/0:16,0:16:45.13:0,45,688	0/0:34,0:34:99:0,102,1497	0/0:21,0:21:60.20:0,60,903	0/0:13,0:13:39.13:0,39,623	0/0:21,0:21:63.21:0,63,1005	0/0:32,0:32:96.31:0,96,1508	0/0:35,0:35:99:0,105,1655	0/0:16,0:16:48.16:0,48,767	0/0:28,0:28:84.27:0,84,1297	0/0:17,0:17:48.15:0,48,740	0/0:27,0:27:81.28:0,81,1295	0/0:37,0:37:99:0,105,1672	0/0:20,0:20:60.20:0,60,955	0/0:36,0:36:99:0,108,1727	0/0:39,0:39:99:0,117,1809	0/0:37,0:36:99:0,108,1722	0/0:21,0:21:60.20:0,60,959	0/0:21,0:21:63.21:0,63,1004	0/0:17,0:17:48.16:0,48,767	0/0:44,0:44:99:0,132,2083	0/0:35,0:35:99:0,102,1619	0/0:36,0:36:99:0,99,1566	0/0:33,0:33:99:0,99,1579	1/1:0,9:9:21.02:193,21,0	0/0:32,0:32:96.33:0,96,1530	0/0:25,0:25:75.23:0,75,1174	0/0:17,0:17:51.17:0,51,815
chr10	39533345	.	ACCG	A	87.59	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.835;DP=770;FS=8.301;HRun=0;HaplotypeScore=128.4138;InbreedingCoeff=0.9938;MQ=87.01;MQ0=1;MQRankSum=-3.642;QD=9.73;ReadPosRankSum=0.725;VQSLOD=2.8734;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:65,0:65:99:0,196,4774	0/0:15,0:15:42.14:0,42,1007	0/0:32,0:32:87.27:0,87,1970	0/0:21,0:21:24.24:0,24,1127	0/0:13,0:13:39.13:0,39,959	0/0:22,0:22:66.23:0,66,1623	0/0:30,0:30:90.29:0,90,2167	0/0:33,0:33:99:0,99,2348	0/0:16,0:16:48.16:0,48,1174	0/0:27,0:27:81.28:0,81,1992	0/0:16,0:16:42.14:0,42,1035	0/0:28,0:28:84.29:0,84,2045	0/0:36,0:36:99:0,105,2528	0/0:19,0:19:57.18:0,57,1340	0/0:35,0:35:99:0,105,2580	0/0:38,0:38:99:0,114,2705	0/0:37,0:36:99:0,108,2577	0/0:21,0:21:63.22:0,63,1546	0/0:21,0:21:63.22:0,63,1526	0/0:17,0:17:48.15:0,48,1131	0/0:43,0:43:99:0,129,3148	0/0:36,0:36:99:0,102,2480	0/0:33,0:33:92.82:0,93,2170	0/0:32,0:32:96.31:0,96,2301	1/1:0,9:9:20.99:180,21,0	0/0:32,0:32:96.33:0,96,2345	0/0:26,0:26:78.27:0,78,1921	0/0:17,0:17:51.18:0,51,1257
chr10	39533941	.	G	GC	13967.21	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-15.223;DP=648;FS=1.819;HRun=3;HaplotypeScore=60.2640;InbreedingCoeff=0.9983;MQ=81.92;MQ0=0;MQRankSum=-1.814;QD=35.09;ReadPosRankSum=3.328;VQSLOD=5.5083;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,36:37:99:1426,102,0	1/1:0,10:10:27.09:378,27,0	0/0:18,0:18:41.97:0,42,404	0/0:15,0:15:17.56:0,18,325	1/1:0,17:17:48.14:643,48,0	1/1:1,17:18:39.13:544,39,0	1/1:2,27:29:72.24:1008,72,0	0/0:22,0:22:45.10:0,45,514	1/1:1,20:21:51.17:714,51,0	1/1:0,16:16:48.11:633,48,0	1/1:1,10:11:27.09:378,27,0	1/1:2,20:22:48.09:647,48,0	0/0:21,0:21:60.17:0,60,706	0/0:28,0:28:75.23:0,75,900	1/1:1,33:34:84.28:1175,84,0	1/1:2,19:21:54.18:755,54,0	1/1:0,46:46:99:1679,120,0	1/1:0,25:25:63.21:882,63,0	0/0:22,0:22:54.05:0,54,600	0/0:14,0:14:33.10:0,33,391	0/0:46,0:46:99:0,132,1541	1/1:0,15:15:39.13:545,39,0	1/1:1,20:21:51.17:713,51,0	1/1:3,33:36:93.31:1301,93,0	1/1:4,15:19:39.13:545,39,0	0/0:29,1:30:39.22:0,39,883	0/0:15,0:15:45.13:0,45,528	0/0:19,0:19:57.17:0,57,684
chr10	39534748	.	T	TC	20231.48	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-14.582;DP=808;FS=6.201;HRun=2;HaplotypeScore=78.2676;InbreedingCoeff=0.9976;MQ=79.44;MQ0=0;MQRankSum=-5.480;QD=43.14;ReadPosRankSum=6.497;VQSLOD=3.6291;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,60:62:99:2686,169,0	1/1:0,6:6:15.05:240,15,0	0/0:32,0:32:93.13:0,93,1223	0/0:21,0:21:51.17:0,51,702	1/1:1,18:19:54.18:863,54,0	1/1:0,20:20:48.05:767,48,0	1/1:1,36:37:99:1583,99,0	0/0:30,0:30:90.26:0,90,1197	1/1:0,21:21:63.21:1007,63,0	1/1:0,32:32:96.31:1512,96,0	1/1:0,17:17:42.14:671,42,0	1/1:0,29:30:87.29:1360,87,0	0/0:28,0:28:84.28:0,84,1174	0/0:36,0:36:99:0,108,1491	1/1:1,32:33:93.32:1487,93,0	1/1:0,34:34:93.32:1487,93,0	1/1:0,40:40:99:1775,111,0	1/1:2,34:36:96.33:1535,96,0	0/0:23,0:23:66.22:0,66,923	0/0:22,0:22:63.21:0,63,881	0/0:86,0:86:99:0,253,3502	1/1:0,14:14:39.13:621,39,0	1/1:0,18:18:45.15:719,45,0	1/1:0,29:29:66.23:1055,66,0	1/1:0,21:21:54.18:863,54,0	0/0:28,1:29:36.32:0,36,1085	0/0:22,0:22:66.21:0,66,906	0/0:10,0:10:30.10:0,30,420
chr10	39534980	.	GTCGGTGCAGATCTTTTGGCTTTCCCT	G	8818.71	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=10.733;DP=708;FS=2.739;HRun=0;HaplotypeScore=446.8302;InbreedingCoeff=0.9813;MQ=90.71;MQ0=0;MQRankSum=-10.561;QD=108.87;ReadPosRankSum=5.076;VQSLOD=3.6714;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,120,12714	0/0:11,0:11:30.07:0,30,2759	0/0:33,0:33:84.04:0,84,3971	0/0:25,0:25:57.18:0,57,2981	0/0:14,0:14:42.14:0,42,4540	1/1:0,16:16:33.11:2267,33,0	1/1:1,13:14:12.04:830,12,0	0/0:24,0:24:63.21:0,63,5367	0/0:26,0:26:75.26:0,75,7278	0/0:30,0:30:78.27:0,78,8074	0/0:12,0:12:30.10:0,30,3170	1/1:0,30:30:60.16:4151,60,0	0/0:33,0:33:96.33:0,96,8474	0/0:35,0:35:96.33:0,96,9675	0/0:38,0:38:99:0,102,10488	0/0:42,0:42:99:0,114,11280	0/0:35,0:35:93.28:0,93,8576	0/0:33,0:33:90.31:0,90,8566	0/0:16,0:16:33.11:0,33,3081	0/0:22,0:22:66.23:0,66,6692	0/0:57,0:57:99:0,160,15897	0/0:14,0:14:33.11:0,33,3327	1/1:1,6:7:15.04:763,15,0	1/1:2,12:14:12.04:807,12,0	0/0:16,0:16:45.15:0,45,3418	0/0:30,0:30:78.27:0,78,8567	0/0:26,0:26:63.69:0,64,6607	0/0:11,0:11:33.11:0,33,3441
chr10	39536030	.	G	GC	13058.49	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-16.683;DP=730;FS=1.922;HRun=2;HaplotypeScore=70.4194;InbreedingCoeff=0.9999;MQ=78.27;MQ0=0;MQRankSum=-1.825;QD=38.52;ReadPosRankSum=2.694;VQSLOD=5.5823;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,132,1590	0/0:12,0:12:33.08:0,33,393	0/0:16,0:16:39.59:0,40,484	0/0:18,0:18:42.12:0,42,503	1/1:5,31:36:90.30:1294,90,0	1/1:2,28:30:81.27:1166,81,0	1/1:1,24:25:65.89:950,66,0	0/0:28,0:28:78.23:0,78,946	1/1:2,19:21:57.19:816,57,0	0/0:26,0:26:72.22:0,72,882	0/0:24,0:24:69.22:0,69,853	1/1:0,22:22:57.19:821,57,0	0/0:21,0:21:63.18:0,63,766	0/0:25,0:25:69.22:0,69,853	1/1:1,29:30:75.25:1079,75,0	1/1:0,22:22:60.20:863,60,0	1/1:2,29:31:84.28:1209,84,0	0/0:24,0:24:69.22:0,69,855	0/0:27,0:27:75.22:0,75,916	0/0:24,0:24:72.18:0,72,854	0/0:30,0:30:90.27:0,90,1102	1/1:3,28:31:84.28:1192,84,0	1/1:0,23:23:66.22:948,66,0	1/1:0,36:35:99:1512,105,0	1/1:1,31:32:84.28:1210,84,0	0/0:37,0:37:99:0,111,1376	0/0:20,0:20:57.18:0,57,705	0/0:14,0:14:42.13:0,42,519
chr10	39536204	.	ACT	A	15953.14	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=11.453;DP=671;FS=9.997;HRun=0;HaplotypeScore=84.9335;InbreedingCoeff=0.9988;MQ=86.19;MQ0=3;MQRankSum=-4.103;QD=39.01;ReadPosRankSum=7.192;VQSLOD=6.3492;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,35:35:87.29:1281,87,0	1/1:0,6:6:18.06:265,18,0	0/0:18,0:18:54.18:0,54,962	0/0:27,0:27:81.13:0,81,1352	1/1:0,20:20:57.19:839,57,0	1/1:0,20:20:57.19:839,57,0	1/1:4,25:29:63.21:928,63,0	0/0:38,0:38:99:0,105,1929	1/1:1,14:15:45.15:660,45,0	1/1:2,30:31:90.28:1296,90,0	1/1:0,14:14:42.14:618,42,0	1/1:0,22:21:63.21:927,63,0	0/0:24,0:24:72.21:0,72,1247	0/0:27,0:27:78.25:0,78,1429	1/1:0,26:26:72.24:1060,72,0	1/1:1,19:20:45.15:663,45,0	1/1:0,44:44:99:1722,117,0	1/1:0,26:26:63.21:924,63,0	0/0:18,0:18:51.17:0,51,951	0/0:20,0:20:57.18:0,57,1035	0/0:32,0:32:96.33:0,96,1798	1/1:0,24:24:66.22:972,66,0	1/1:0,20:19:47.95:706,48,0	1/1:1,33:34:93.31:1369,93,0	1/1:0,21:21:60.20:883,60,0	0/0:22,0:22:39.31:0,39,1154	0/0:21,0:21:60.21:0,60,1103	0/0:15,0:15:45.15:0,45,843
chr10	39536628	.	A	ACTT	8883.24	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-10.556;DP=777;FS=0.360;HRun=0;HaplotypeScore=104.4065;InbreedingCoeff=0.9960;MQ=77.47;MQ0=2;MQRankSum=-3.697;QD=62.12;ReadPosRankSum=3.123;VQSLOD=6.7095;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,105,1955	0/0:11,0:11:33.11:0,33,615	0/0:25,0:25:75.23:0,75,1326	0/0:21,0:20:54.17:0,54,922	0/0:28,0:28:81.28:0,81,1482	1/1:0,18:19:51.18:1256,51,0	1/1:2,23:27:72.25:1766,72,0	0/0:32,0:32:93.32:0,93,1723	0/0:42,0:42:99:0,126,2328	0/0:25,0:25:75.22:0,75,1329	0/0:23,0:23:66.21:0,66,1194	1/1:4,36:41:99:2590,108,0	0/0:24,0:24:69.19:0,69,1216	0/0:22,0:22:63.22:0,63,1173	0/0:38,0:38:99:0,111,2028	0/0:32,0:32:96.33:0,96,1778	0/0:33,0:33:93.29:0,93,1692	0/0:24,0:24:72.23:0,72,1311	0/0:31,0:31:87.26:0,87,1528	0/0:29,0:29:84.27:0,84,1535	0/0:49,0:49:99:0,144,2643	0/0:19,0:19:57.20:0,57,1057	1/1:2,28:29:78.22:1793,78,0	1/1:4,20:25:60.21:1478,60,0	0/0:17,0:16:51.16:0,51,920	0/0:38,0:38:99:0,114,2054	0/0:26,0:26:78.27:0,78,1454	0/0:6,0:6:14.79:0,15,279
chr10	39539280	.	TTTAA	T	3757.83	PASS	AB=0.963;AC=12;AF=0.214;AN=56;BaseQRankSum=6.688;DP=567;FS=3.410;HRun=0;HaplotypeScore=101.2135;InbreedingCoeff=0.8135;MQ=72.84;MQ0=2;MQRankSum=-4.387;QD=25.92;ReadPosRankSum=2.843;VQSLOD=3.6107;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,34:39:81.28:1403,81,0	1/1:1,7:8:15.05:248,15,0	0/0:14,0:14:36.12:0,36,746	0/1:7,0:7:6.67:7,0,258	0/0:25,0:25:57.20:0,57,1449	0/0:14,0:14:33.10:0,33,791	0/0:19,0:19:51.18:0,51,1296	0/0:32,0:32:81.28:0,81,2044	0/0:12,0:12:30.10:0,30,741	1/1:8,22:29:60.16:941,60,0	1/1:1,14:15:13.29:260,13,0	0/0:23,0:23:66.23:0,66,1643	0/0:14,0:14:39.13:0,39,984	0/0:23,0:23:69.17:0,69,1681	0/0:23,0:23:66.21:0,66,1632	0/0:20,0:20:60.21:0,60,1529	0/0:29,0:29:87.28:0,87,2137	1/1:1,20:20:51.17:893,51,0	0/0:25,0:25:60.20:0,60,1472	0/0:18,0:18:45.14:0,45,1056	0/0:17,0:17:43.36:0,43,949	0/0:16,0:16:45.15:0,45,1149	0/0:15,0:15:39.13:0,39,996	0/0:19,0:19:51.18:0,51,1285	0/0:23,0:23:63.22:0,63,1604	0/1:23,2:25:6.31:6,0,1469	0/0:26,0:26:75.24:0,75,1781	0/0:15,0:15:42.14:0,42,1072
chr10	39543560	.	TATCC	T	11387.67	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=15.284;DP=710;FS=1.011;HRun=0;HaplotypeScore=142.4717;InbreedingCoeff=0.9998;MQ=87.85;MQ0=2;MQRankSum=-6.217;QD=37.34;ReadPosRankSum=6.224;VQSLOD=5.1039;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:72.25:0,72,1816	0/0:12,0:12:30.10:0,30,751	0/0:25,0:25:57.20:0,57,1426	0/0:28,0:28:64.03:0,64,1380	1/1:2,20:22:48.16:848,48,0	1/1:3,18:21:45.15:795,45,0	1/1:7,25:32:51.17:900,51,0	0/0:38,0:38:99:0,99,2424	1/1:0,21:20:51.17:901,51,0	0/0:22,0:22:60.21:0,60,1541	0/0:18,0:18:45.15:0,45,1153	1/1:3,27:30:75.26:1324,75,0	0/0:30,0:30:90.29:0,90,2189	0/0:23,0:23:63.22:0,63,1583	1/1:3,27:29:75.26:1325,75,0	1/1:3,23:26:60.21:1060,60,0	1/1:8,25:33:63.22:1110,63,0	0/0:20,0:20:57.20:0,57,1428	0/0:27,0:27:60.20:0,60,1435	0/0:11,0:11:33.10:0,33,783	0/0:47,0:47:99:0,132,3377	1/1:1,20:21:39.13:689,39,0	1/1:4,14:17:30.10:530,30,0	1/1:2,26:28:63.22:1113,63,0	1/1:1,22:23:45.15:795,45,0	0/0:21,0:21:63.21:0,63,1512	0/0:37,0:37:99:0,105,2638	0/0:19,0:19:51.18:0,51,1287
chr10	39543891	.	A	AT	15285.76	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-12.384;DP=695;FS=1.951;HRun=1;HaplotypeScore=75.9729;InbreedingCoeff=0.9997;MQ=94.51;MQ0=0;MQRankSum=-5.610;QD=44.31;ReadPosRankSum=4.985;VQSLOD=4.3931;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,129,1785	0/0:10,0:10:30.10:0,30,419	0/0:40,0:39:99:0,105,1396	0/0:34,0:34:98.11:0,98,1278	1/1:0,17:17:48.16:767,48,0	1/1:0,24:24:57.19:911,57,0	1/1:0,27:27:69.24:1103,69,0	0/0:23,0:23:69.23:0,69,961	1/1:0,21:21:57.19:911,57,0	0/0:21,0:21:63.21:0,63,880	0/0:16,0:16:45.15:0,45,628	1/1:0,27:27:81.28:1288,81,0	1/1:0,22:22:57.19:910,57,0	1/1:0,15:15:36.12:575,36,0	1/1:0,43:43:99:2014,126,0	1/1:0,34:34:96.33:1534,96,0	1/1:1,30:31:87.30:1390,87,0	0/0:19,0:19:51.17:0,51,699	0/0:19,0:19:54.18:0,54,753	0/0:16,0:16:48.16:0,48,670	0/0:66,0:64:99:0,184,2559	1/1:0,9:9:27.09:431,27,0	1/1:0,19:19:57.19:910,57,0	1/1:0,34:34:93.32:1485,93,0	1/1:0,22:22:66.23:1055,66,0	0/0:17,0:17:48.16:0,48,671	0/0:14,0:14:42.13:0,42,570	0/0:11,0:11:33.11:0,33,459
chr10	39543923	.	GGTGTGTGTGTGTGT	G	467.03	PASS	AB=0.945;AC=13;AF=0.250;AN=52;BaseQRankSum=3.285;DP=614;FS=4.379;HRun=0;HaplotypeScore=240.0072;InbreedingCoeff=0.1627;MQ=65.72;MQ0=12;MQRankSum=-1.020;QD=2.18;ReadPosRankSum=2.643;VQSLOD=1.9844;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:33:49.83:50,0,79	0/0:8,0:8:2.98:0,3,22	./.	0/0:30,0:19:1.55:0,2,4	1/1:20,0:20:2.92:17,3,0	0/0:14,0:14:3.01:0,3,65	0/1:29,0:28:11:11,0,128	0/0:18,0:17:0:0,0,0	./.	0/0:18,0:18:3:0,3,28	0/1:12,0:13:51.68:52,0,59	0/0:20,0:20:6.01:0,6,117	0/0:30,0:30:42.14:0,42,2185	0/0:17,0:17:15.04:0,15,767	0/1:36,1:36:99:205,0,160	1/1:25,0:24:2.22:7,2,0	1/1:25,0:25:8.27:74,8,0	0/1:18,3:21:99:115,0,115	0/0:22,0:21:10.39:0,10,305	0/0:16,0:16:21.07:0,21,1113	0/0:66,0:62:27.09:0,27,1306	1/1:9,1:10:3.01:74,3,0	0/0:15,0:14:12.04:0,12,441	0/0:17,0:18:3:0,3,25	0/0:20,0:20:6.02:0,6,130	0/0:16,0:16:24.08:0,24,1214	0/0:8,0:8:6.02:0,6,367	0/0:11,0:10:3.01:0,3,194
chr10	39544159	.	AACTT	A	10201.30	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=18.035;DP=524;FS=7.937;HRun=0;HaplotypeScore=141.7560;InbreedingCoeff=0.9976;MQ=83.64;MQ0=0;MQRankSum=-17.497;QD=52.86;ReadPosRankSum=2.264;VQSLOD=5.9344;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:99:0,99,2670	0/0:7,0:7:21.07:0,21,595	0/0:23,0:23:61.19:0,61,1697	0/0:19,0:18:37.66:0,38,955	1/1:0,13:13:32.89:531,33,0	1/1:0,9:9:27.09:529,27,0	1/1:0,17:17:51.18:997,51,0	0/0:29,0:29:84.27:0,84,2210	1/1:0,13:13:39.13:769,39,0	0/0:25,0:25:72.25:0,72,2050	0/0:12,0:12:36.12:0,36,1030	1/1:2,24:26:78.27:1490,78,0	0/0:32,0:32:96.32:0,96,2659	0/0:22,0:22:66.23:0,66,1864	1/1:1,21:22:66.21:1260,66,0	1/1:0,16:16:48.16:939,48,0	1/1:1,21:22:60.20:1112,60,0	0/0:18,0:18:54.19:0,54,1563	0/0:11,0:11:30.10:0,30,867	0/0:12,0:12:36.12:0,36,1019	0/0:40,0:40:99:0,120,3377	1/1:0,12:12:33.11:643,33,0	1/1:0,10:10:24.08:462,24,0	1/1:1,20:21:44.46:832,44,0	1/1:1,11:12:33.11:638,33,0	0/0:24,0:24:72.24:0,72,2027	0/0:18,0:18:51.18:0,51,1459	0/0:6,0:6:18.06:0,18,522
chr10	39544165	.	AC	A	5969.31	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=18.137;DP=536;FS=8.714;HRun=2;HaplotypeScore=128.5067;InbreedingCoeff=0.9980;MQ=82.70;MQ0=0;MQRankSum=-17.464;QD=31.58;ReadPosRankSum=2.952;VQSLOD=3.6916;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:93.32:0,93,1393	0/0:9,0:9:24.06:0,24,321	0/0:23,0:23:39.74:0,40,794	0/0:19,0:18:45.01:0,45,558	1/1:0,13:13:33.08:356,33,0	1/1:0,9:9:27.08:313,27,0	1/1:2,17:19:54.16:628,54,0	0/0:27,0:27:72.23:0,72,1059	1/1:1,12:13:39.11:449,39,0	0/0:24,0:24:66.20:0,66,952	0/0:12,0:12:36.12:0,36,539	1/1:0,24:24:72.19:828,72,0	0/0:33,0:33:96.31:0,96,1400	0/0:24,0:24:72.24:0,72,1078	1/1:1,20:21:63.18:723,63,0	1/1:0,16:16:48.14:555,48,0	1/1:1,21:22:54.14:620,54,0	0/0:21,0:21:63.21:0,63,942	0/0:12,0:12:33.08:0,33,461	0/0:14,0:14:42.13:0,42,606	0/0:45,0:45:99:0,110,1811	1/1:0,12:12:33.10:379,33,0	1/1:0,8:8:24.07:271,24,0	1/1:1,20:21:41.65:473,42,0	1/1:0,11:11:33.09:374,33,0	0/0:28,0:28:81.25:0,81,1173	0/0:18,0:18:51.17:0,51,764	0/0:6,0:6:18.06:0,18,270
chr10	39547134	.	GCTAGAGGT	G	21053.87	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=18.311;DP=584;FS=7.423;HRun=0;HaplotypeScore=239.4440;InbreedingCoeff=0.9932;MQ=88.88;MQ0=0;MQRankSum=-18.933;QD=60.85;ReadPosRankSum=3.380;VQSLOD=3.5669;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,29:30:72.71:1642,73,0	1/1:0,7:7:21.07:492,21,0	0/0:29,0:28:81.28:0,81,3228	0/0:38,0:38:82.88:0,83,3886	1/1:3,15:18:34.67:768,35,0	1/1:2,15:17:48.16:1318,48,0	1/1:1,13:14:42.14:977,42,0	0/0:35,0:35:96.32:0,96,3710	1/1:1,20:21:60.20:1594,60,0	1/1:3,17:20:48.16:1377,48,0	1/1:1,13:14:33.11:584,33,0	1/1:3,26:29:81.28:2019,81,0	1/1:1,13:14:36.12:934,36,0	1/1:1,18:19:51.17:1385,51,0	1/1:2,20:22:45.15:1192,45,0	1/1:3,18:21:57.20:1514,57,0	1/1:2,14:16:37.01:935,37,0	1/1:4,8:12:21.07:553,21,0	0/0:25,0:25:69.23:0,69,2848	0/0:20,0:20:60.21:0,60,2361	0/0:26,0:26:72.23:0,72,2973	1/1:0,16:16:48.16:1101,48,0	1/1:4,13:17:45.13:867,45,0	1/1:2,19:21:21.16:491,21,0	1/1:0,18:18:54.18:1310,54,0	0/0:24,0:23:69.24:0,69,3081	0/0:37,0:37:99:0,111,4789	0/0:4,0:4:12.04:0,12,489
chr10	39547172	.	C	CCCACGTGGTCT	41387.71	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=8.454;DP=611;FS=16.277;HRun=0;HaplotypeScore=263.2160;InbreedingCoeff=0.9929;MQ=77.73;MQ0=0;MQRankSum=-18.101;QD=104.51;ReadPosRankSum=3.170;VQSLOD=3.8236;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,19:37:81.28:4325,81,0	1/1:0,8:11:21.07:1197,21,0	0/0:26,0:25:65.02:0,65,1881	0/0:32,0:32:90.27:0,90,2763	1/1:4,11:19:21.07:1165,21,0	1/1:8,11:22:51.18:2747,51,0	1/1:7,9:19:33.11:1672,33,0	0/0:29,0:29:78.26:0,78,2558	1/1:10,12:26:51.17:2762,51,0	1/1:10,16:30:75:3804,75,0	1/1:6,6:15:21.07:1084,21,0	1/1:7,15:28:60.16:3053,60,0	1/1:6,6:16:21.07:1172,21,0	1/1:9,15:26:57.20:2947,57,0	1/1:9,9:19:45.15:2313,45,0	1/1:3,15:22:48.16:2713,48,0	1/1:9,13:23:51.17:2692,51,0	1/1:5,7:15:30.10:1576,30,0	0/0:25,0:25:56.88:0,57,1860	0/0:17,0:17:48.16:0,48,1615	0/0:25,0:25:72.22:0,72,2380	1/1:4,10:18:33.11:1803,33,0	1/1:0,9:12:24.08:1242,24,0	1/1:9,9:20:14.55:843,15,0	1/1:8,9:18:42.14:2280,42,0	0/0:23,0:22:63.22:0,63,2071	0/0:32,0:32:93.31:0,93,3038	0/0:6,0:6:18.06:0,18,634
chr10	39547325	.	CGAAAGTTGAAAAAAAAAAAAA	C	12064.89	PASS	AB=1.000;AC=37;AF=0.685;AN=54;BaseQRankSum=9.283;DP=386;FS=7.947;HRun=0;HaplotypeScore=220.0969;InbreedingCoeff=0.7997;MQ=76.05;MQ0=0;MQRankSum=-10.437;QD=54.35;ReadPosRankSum=4.433;VQSLOD=3.2146;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:15,1:16:8.98:259,9,0	1/1:3,5:8:15.05:834,15,0	0/0:26,0:23:41.80:0,42,1413	0/0:11,0:11:5.70:0,6,303	1/1:6,2:8:9.03:320,9,0	1/1:8,4:12:15.04:730,15,0	1/1:9,6:15:21.02:921,21,0	0/0:21,0:21:51.17:0,51,3779	1/1:3,3:6:9.02:500,9,0	1/1:7,5:12:18.05:889,18,0	1/1:11,6:17:21.05:1167,21,0	1/1:1,3:4:9.03:500,9,0	1/1:9,1:10:6:333,6,0	1/1:5,6:11:12.04:667,12,0	1/1:4,8:12:18.05:1000,18,0	1/1:8,4:12:21.06:855,21,0	1/1:12,7:19:18.05:939,18,0	1/1:9,2:11:6:333,6,0	0/0:23,0:23:57.18:0,57,3687	0/0:19,0:19:51.15:0,51,3578	0/0:24,0:24:48.15:0,48,3543	./.	1/1:5,3:8:9.03:500,9,0	1/1:13,3:16:18.05:664,18,0	1/1:8,5:13:15:628,15,0	0/1:12,0:12:24.54:25,0,1854	0/0:19,0:19:54.19:0,54,4410	0/0:16,0:16:48.16:0,48,3877
chr10	39547333	.	GA	G	330.84	PASS	AB=0.883;AC=40;AF=0.741;AN=54;BaseQRankSum=10.570;DP=365;FS=3.300;HRun=13;HaplotypeScore=107.5838;InbreedingCoeff=0.3869;MQ=73.24;MQ0=0;MQRankSum=-9.144;QD=1.27;ReadPosRankSum=5.742;VQSLOD=-0.5673;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:13:1.75:6,2,0	1/1:6,0:6:10.37:31,10,0	0/1:23,3:22:24.66:25,0,75	0/0:9,1:9:6.01:0,6,58	1/1:7,0:7:1.86:6,2,0	1/1:8,0:8:7.72:24,8,0	1/1:15,0:15:9.70:30,10,0	0/0:26,1:27:21.34:0,21,455	1/1:5,0:5:6.11:19,6,0	1/1:11,0:11:10.23:31,10,0	1/1:12,0:13:14.26:43,14,0	1/1:4,0:4:6.11:19,6,0	1/1:6,0:7:4.07:12,4,0	1/1:6,0:6:8.15:25,8,0	1/1:10,0:10:12.22:37,12,0	1/1:11,0:11:7.55:23,8,0	1/1:12,0:12:10.01:31,10,0	1/1:10,0:10:4.07:12,4,0	0/1:26,3:29:26.81:27,0,407	0/1:18,3:22:18.45:18,0,293	0/0:18,1:23:25.64:0,26,356	./.	1/1:5,0:5:6.11:19,6,0	1/1:14,0:14:5.52:18,6,0	1/1:10,0:10:5.92:18,6,0	0/0:15,1:17:35.89:0,36,332	0/0:17,1:22:21.98:0,22,374	0/1:13,3:17:26.85:27,0,231
chr10	39547372	.	C	CTTT	2255.87	PASS	AB=0.696;AC=32;AF=0.571;AN=56;BaseQRankSum=7.409;DP=435;FS=15.856;HRun=0;HaplotypeScore=154.0108;InbreedingCoeff=0.5283;MQ=70.17;MQ0=1;MQRankSum=-8.138;QD=8.42;ReadPosRankSum=2.563;VQSLOD=1.9256;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:5,0:17:40.66:64,0,41	0/1:1,0:9:4.88:16,0,5	0/0:21,0:20:47.56:0,48,707	0/0:16,0:12:13.27:0,13,299	1/1:4,7:12:16.44:291,16,0	1/1:2,0:10:11.94:54,12,0	0/1:8,0:19:3.15:36,0,3	0/0:26,0:26:78.26:0,78,1372	1/1:4,6:12:15.31:287,15,0	1/1:4,0:14:1.32:38,1,0	1/1:6,0:20:23.82:100,24,0	1/1:2,0:13:10.17:44,10,0	1/1:3,0:8:3.56:29,4,0	0/1:14,0:18:17.58:18,0,69	0/1:9,1:10:6.30:44,0,6	1/1:7,8:16:18.82:410,19,0	1/1:8,11:25:38:615,38,0	1/1:3,0:14:8.89:49,9,0	0/0:14,0:14:41.96:0,42,664	0/0:26,0:26:78.27:0,78,1390	0/0:14,0:14:39.13:0,39,643	1/1:3,4:9:18.01:247,18,0	0/1:5,0:14:35.54:38,0,36	1/1:3,0:13:10.61:48,11,0	1/1:3,0:14:10.04:29,10,0	0/0:15,0:15:45.15:0,45,785	0/0:22,0:21:63.22:0,63,1116	0/0:12,0:12:36.08:0,36,594
chr10	39547623	.	G	GCCC	2860.62	PASS	AB=0.981;AC=22;AF=0.393;AN=56;BaseQRankSum=15.286;DP=462;FS=5.855;HRun=0;HaplotypeScore=141.9286;InbreedingCoeff=-0.0212;MQ=69.56;MQ0=1;MQRankSum=-14.845;QD=11.40;ReadPosRankSum=4.979;VQSLOD=2.9339;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:18,0:18:99:111,0,154	0/1:2,0:2:7.68:8,0,19	0/0:19,0:13:33.49:0,33,521	0/0:27,0:22:35.91:0,36,711	1/1:8,0:8:17.72:157,18,0	1/1:14,0:14:18.67:163,19,0	0/1:15,0:15:21.57:22,0,218	0/0:37,0:37:99:0,111,1966	0/1:14,0:14:48.95:210,0,49	0/1:13,0:13:78.81:106,0,79	0/1:16,0:16:91.09:91,0,146	0/1:15,1:16:56.81:145,0,57	0/1:9,2:11:5.73:284,0,6	1/1:13,1:13:36.04:358,36,0	0/1:18,0:18:3.32:308,0,3	0/1:17,0:17:57.52:292,0,58	0/1:29,0:29:99:409,0,122	0/1:16,0:16:54.16:54,0,64	0/0:17,0:17:51.15:0,51,874	0/0:19,0:19:57.18:0,57,1018	0/0:16,0:16:48.16:0,48,886	1/1:8,0:8:16.58:167,17,0	0/1:17,0:18:98.48:137,0,98	0/1:4,0:4:18.34:18,0,26	0/0:9,0:9:0.80:0,1,101	0/0:24,0:24:57.92:0,58,1106	0/0:22,0:22:66.19:0,66,1148	0/0:20,0:20:60.21:0,60,1100
chr10	39547624	.	T	TCCC	10729.11	PASS	AB=1.000;AC=39;AF=0.696;AN=56;BaseQRankSum=12.705;DP=473;FS=5.516;HRun=6;HaplotypeScore=124.8381;InbreedingCoeff=0.8684;MQ=70.69;MQ0=1;MQRankSum=-13.108;QD=36.62;ReadPosRankSum=-0.893;VQSLOD=3.0890;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:19:42.08:653,42,0	1/1:1,0:1:3.01:51,3,0	0/0:21,0:15:24.51:0,25,286	0/0:27,0:23:33.91:0,34,400	1/1:1,8:9:17.98:343,18,0	1/1:15,0:15:39.12:646,39,0	1/1:16,0:16:33.05:451,33,0	0/0:38,0:38:84.26:0,84,1191	1/1:3,11:14:30.10:636,30,0	1/1:14,0:14:38.84:543,39,0	1/1:17,0:17:35.83:480,36,0	1/1:12,0:16:39.04:551,39,0	1/1:4,7:11:30.10:629,30,0	1/1:3,12:14:36.12:763,36,0	1/1:9,11:20:53.83:1061,54,0	1/1:5,13:18:45.12:888,45,0	1/1:9,20:29:66.05:1334,66,0	1/1:15,0:16:33.07:466,33,0	0/0:17,0:17:42.13:0,42,595	0/0:18,0:18:54.17:0,54,748	0/0:16,0:16:45.15:0,45,638	1/1:1,7:8:21.07:428,21,0	1/1:18,0:19:39.07:551,39,0	1/1:4,0:4:9.01:127,9,0	1/1:7,0:8:8.99:99,9,0	0/1:24,0:24:28.87:29,0,768	0/0:21,0:21:57.18:0,57,796	0/0:20,0:20:54.18:0,54,764
chr10	39547630	.	C	CCCT	10908.10	PASS	AB=0.923;AC=39;AF=0.696;AN=56;BaseQRankSum=10.970;DP=445;FS=7.579;HRun=0;HaplotypeScore=122.3117;InbreedingCoeff=0.8665;MQ=72.58;MQ0=2;MQRankSum=-13.186;QD=39.81;ReadPosRankSum=0.364;VQSLOD=6.1126;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,10:16:41.93:875,42,0	1/1:0,1:1:3.01:71,3,0	0/0:25,0:17:32.13:0,32,327	0/0:26,0:21:18.81:0,19,378	1/1:9,0:9:21.37:253,21,0	1/1:2,13:15:42.08:920,42,0	1/1:8,5:13:39.04:701,39,0	0/0:32,0:32:90.26:0,90,1399	1/1:13,0:13:13.99:424,14,0	1/1:5,9:14:39.10:802,39,0	1/1:6,9:15:36.12:704,36,0	1/1:8,7:15:42.03:743,42,0	1/1:11,0:11:16.08:435,16,0	1/1:16,0:15:35.63:541,36,0	1/1:17,0:19:19.17:698,19,0	1/1:16,0:16:29.54:585,30,0	1/1:26,0:26:51.90:940,52,0	1/1:7,8:16:36.08:696,36,0	0/0:16,0:16:48.11:0,48,737	0/0:18,0:18:54.17:0,54,865	0/0:15,0:15:45.15:0,45,711	1/1:9,0:9:21.07:314,21,0	1/1:6,9:16:45.05:809,45,0	1/1:1,2:3:9.01:166,9,0	1/1:4,3:7:11.94:161,12,0	0/1:22,2:24:70.82:71,0,971	0/0:20,0:21:63.13:0,63,984	0/0:18,0:18:54.18:0,54,881
chr10	39547646	.	T	TCTAAC	17717.42	PASS	AB=0.958;AC=39;AF=0.696;AN=56;BaseQRankSum=10.324;DP=389;FS=11.822;HRun=0;HaplotypeScore=101.9463;InbreedingCoeff=0.8649;MQ=69.04;MQ0=1;MQRankSum=-15.881;QD=77.71;ReadPosRankSum=3.585;VQSLOD=6.7369;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,9:15:39.13:1148,39,0	1/1:0,2:2:6.02:197,6,0	0/0:22,0:17:44.96:0,45,844	0/0:19,0:15:20:0,20,388	1/1:0,2:2:6.02:195,6,0	1/1:2,16:19:54.18:1650,54,0	1/1:3,7:11:28.34:890,28,0	0/0:33,0:33:87.28:0,87,1856	1/1:0,11:11:33.11:1083,33,0	1/1:4,8:12:36.08:1087,36,0	1/1:2,6:8:24.08:689,24,0	1/1:1,10:11:33.11:1024,33,0	1/1:1,11:12:36.12:1128,36,0	1/1:0,16:15:45.15:1422,45,0	1/1:4,10:14:39.13:1107,39,0	1/1:1,9:11:33.11:1022,33,0	1/1:3,13:17:51.17:1517,51,0	1/1:3,8:11:21.07:691,21,0	0/0:22,0:22:63.21:0,63,1409	0/0:19,0:19:54.18:0,54,1178	0/0:8,0:8:24.08:0,24,527	1/1:3,7:10:30.10:859,30,0	1/1:0,10:10:30.10:983,30,0	1/1:0,2:2:6.02:197,6,0	1/1:3,7:11:30.10:798,30,0	0/1:22,1:23:29.47:29,0,1439	0/0:25,0:25:69.24:0,69,1607	0/0:13,0:13:39.10:0,39,776
chr10	39547705	.	C	CAA	5241.88	PASS	AB=0.963;AC=29;AF=0.518;AN=56;BaseQRankSum=7.098;DP=566;FS=5.376;HRun=11;HaplotypeScore=127.9620;InbreedingCoeff=0.7713;MQ=63.07;MQ0=5;MQRankSum=-5.783;QD=16.33;ReadPosRankSum=0.995;VQSLOD=3.3248;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:10,0:21:4.08:83,4,0	1/1:2,0:10:19.96:69,20,0	0/0:46,0:26:14.32:0,14,150	0/1:41,0:17:20.63:21,0,26	1/1:4,11:17:44.07:533,44,0	0/0:20,0:20:42.01:0,42,407	0/0:9,0:9:18:0,18,168	0/0:32,0:31:47.89:0,48,444	1/1:5,7:14:26.57:340,27,0	1/1:10,0:19:4.33:91,4,0	1/1:5,0:17:30.45:123,30,0	0/1:14,1:15:12.97:13,0,231	1/1:7,8:16:41.58:531,42,0	1/1:7,9:16:39.12:535,39,0	1/1:6,17:23:57.19:821,57,0	1/1:7,7:16:33.08:415,33,0	1/1:10,17:27:57.17:790,57,0	1/1:6,1:26:51.92:220,52,0	0/1:16,1:19:2.44:2,0,122	0/0:24,0:26:46.57:0,47,537	0/0:12,0:12:30:0,30,291	1/1:5,13:19:50.60:654,51,0	0/0:13,0:15:25.40:0,25,333	0/0:11,0:11:26.86:0,27,261	0/0:15,0:15:39.03:0,39,370	0/0:23,0:25:53.69:0,54,538	0/0:20,0:20:51.05:0,51,494	0/0:14,0:14:28.58:0,29,266
chr10	39547775	.	GT	G	9847.48	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=12.869;DP=553;FS=0.000;HRun=5;HaplotypeScore=74.7068;InbreedingCoeff=0.9961;MQ=75.35;MQ0=0;MQRankSum=-4.325;QD=28.71;ReadPosRankSum=3.484;VQSLOD=5.2417;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,26:26:72.21:816,72,0	1/1:3,7:10:24.04:260,24,0	0/0:15,0:15:33.06:0,33,421	0/0:13,0:13:16.13:0,16,196	1/1:1,19:20:48.13:544,48,0	1/1:1,10:11:27.08:306,27,0	1/1:1,15:16:39.11:442,39,0	0/0:33,0:33:93.30:0,93,1256	1/1:3,14:17:42.12:476,42,0	1/1:1,19:20:57.16:646,57,0	1/1:2,17:19:48.14:544,48,0	1/1:0,19:19:57.16:646,57,0	1/1:4,8:12:24.06:272,24,0	1/1:5,21:26:57.16:646,57,0	1/1:1,13:14:39.11:442,39,0	1/1:1,13:14:36.10:408,36,0	1/1:1,21:22:63.15:701,63,0	1/1:5,24:29:69.14:757,69,0	0/0:25,0:25:69.23:0,69,934	0/0:26,0:26:75.25:0,75,1026	0/0:27,0:27:78.15:0,78,993	1/1:1,13:14:36.10:408,36,0	1/1:1,15:16:39.11:442,39,0	1/1:0,21:21:57.16:647,57,0	1/1:1,16:17:39.11:442,39,0	0/0:29,2:31:19.21:0,19,1040	0/0:23,0:23:69.23:0,69,944	0/0:17,0:17:45.09:0,45,577
chr10	39547999	.	T	TTTCC	5183.16	PASS	AB=0.828;AC=47;AF=0.979;AN=48;BaseQRankSum=0.637;DP=678;FS=0.000;HRun=0;HaplotypeScore=184.0102;InbreedingCoeff=-0.0824;MQ=62.16;MQ0=3;MQRankSum=-1.452;QD=8.73;ReadPosRankSum=1.452;VQSLOD=4.1537;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:39,0:39:11.98:146,12,0	1/1:10,0:10:6.49:91,6,0	./.	./.	1/1:31,0:30:21.89:330,22,0	1/1:18,0:21:3.48:53,3,0	1/1:25,1:26:3.48:71,3,0	./.	1/1:30,0:30:9.92:161,10,0	1/1:31,0:31:15.94:234,16,0	1/1:20,0:19:2.58:44,3,0	1/1:19,0:19:3.01:41,3,0	1/1:28,0:28:17.96:274,18,0	1/1:32,0:32:33.09:460,33,0	1/1:36,0:35:23.77:426,24,0	1/1:23,0:23:28.22:352,28,0	1/1:19,0:19:12.01:167,12,0	1/1:25,0:25:14.93:158,15,0	1/1:18,1:18:3.01:69,3,0	1/1:9,4:15:12.04:248,12,0	1/1:41,3:44:21.53:432,22,0	1/1:23,0:22:9.86:112,10,0	./.	1/1:19,0:22:15.49:268,15,0	1/1:12,0:17:3.48:53,3,0	1/1:16,7:23:21.05:390,21,0	0/1:19,5:24:93.57:256,0,94	1/1:8,6:15:15.05:347,15,0
chr10	39548005	.	T	TG	933.60	PASS	AB=0.821;AC=7;AF=0.125;AN=56;BaseQRankSum=-1.509;DP=677;FS=0.000;HRun=0;HaplotypeScore=108.8857;InbreedingCoeff=-0.1432;MQ=57.64;MQ0=9;MQRankSum=-7.390;QD=5.16;ReadPosRankSum=-3.208;VQSLOD=2.6866;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:33,4:37:99:119,0,1119	0/1:8,4:12:99:101,0,262	0/0:11,0:10:26.74:0,27,328	0/0:15,0:13:36.12:0,36,503	0/0:35,0:34:66.25:0,66,1054	0/0:21,0:21:54.06:0,54,679	0/0:23,0:23:69.18:0,69,920	0/0:35,0:32:92.09:0,92,1201	0/0:30,1:30:20.49:0,20,821	0/1:24,6:30:99:186,0,841	0/1:16,3:18:74.54:75,0,524	0/0:23,0:22:56.92:0,57,720	0/1:19,8:27:99:202,0,681	0/1:20,13:34:99:346,0,743	0/0:41,0:39:56.72:0,57,748	0/0:27,0:27:29.71:0,30,758	0/0:18,0:18:44.71:0,45,555	0/1:20,2:22:35.13:35,0,635	0/0:21,0:17:46.23:0,46,545	0/0:15,0:15:42.03:0,42,480	0/0:44,0:43:99:0,125,1598	0/0:21,0:20:54.12:0,54,712	0/0:14,0:14:36.12:0,36,502	0/0:23,0:22:55.78:0,56,686	0/0:16,0:16:36.07:0,36,452	0/0:23,0:23:65.69:0,66,736	0/0:23,0:23:66.15:0,66,839	0/0:16,0:15:38.99:0,39,431
chr10	39548021	.	T	TCCTTGCCTG	4983.38	PASS	AB=0.966;AC=12;AF=0.222;AN=54;BaseQRankSum=-0.720;DP=678;FS=0.381;HRun=0;HaplotypeScore=201.4780;InbreedingCoeff=-0.2822;MQ=50.94;MQ0=17;MQRankSum=-3.343;QD=13.80;ReadPosRankSum=8.832;VQSLOD=2.6514;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:42,0:42:48.96:49,0,884	0/0:11,0:11:8.77:0,9,161	./.	0/0:8,0:6:11.21:0,11,268	0/1:34,0:33:99:905,0,473	0/1:23,0:23:1.45:1,0,897	0/0:24,0:24:66.18:0,66,1218	0/0:24,0:18:36.10:0,36,616	0/1:31,0:31:99:739,0,439	0/0:32,0:32:27.57:0,28,892	0/0:20,0:19:24.26:0,24,560	0/0:25,0:23:57.15:0,57,1106	0/1:24,0:25:99:240,0,583	0/1:38,0:38:99:376,0,901	0/1:23,22:44:99:169,0,1002	0/1:35,0:35:99:926,0,804	0/1:22,0:21:99:591,0,265	0/1:27,0:27:88.25:88,0,614	0/0:15,0:9:14.26:0,14,248	0/0:16,0:16:30.50:0,30,479	0/0:38,0:37:93.35:0,93,1668	0/1:21,0:20:99:857,0,195	0/0:13,0:13:23.75:0,24,429	0/0:21,0:20:14.12:0,14,731	0/1:16,0:16:42.51:43,0,355	0/0:24,0:24:56.25:0,56,1034	0/0:20,0:20:42.62:0,43,957	0/0:19,0:18:15.03:0,15,285
chr10	39548025	.	T	TG	3183.42	PASS	AB=0.692;AC=7;AF=0.130;AN=54;BaseQRankSum=3.258;DP=676;FS=9.792;HRun=0;HaplotypeScore=96.4913;InbreedingCoeff=-0.1500;MQ=51.72;MQ0=17;MQRankSum=-1.239;QD=15.16;ReadPosRankSum=5.530;VQSLOD=4.9299;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,105,1079	0/0:8,0:9:21.65:0,22,164	./.	0/0:10,0:8:17.23:0,17,272	0/1:18,17:34:99:542,0,473	0/0:23,0:23:59.77:0,60,755	0/0:25,0:25:75.21:0,75,986	0/0:25,0:18:43.94:0,44,562	0/1:14,17:30:99:507,0,344	0/0:29,0:29:72.58:0,73,874	0/0:17,0:16:40.85:0,41,497	0/0:23,0:21:60.18:0,60,801	0/1:18,9:27:99:421,0,433	0/1:24,13:37:99:543,0,656	0/0:42,0:40:53.29:0,53,848	0/1:23,13:36:99:464,0,741	0/1:12,10:21:99:302,0,325	0/0:28,0:28:73.57:0,74,753	0/0:14,0:8:19.25:0,19,205	0/0:17,0:17:45.06:0,45,524	0/0:42,0:42:99:0,120,1508	0/1:8,14:22:99:535,0,137	0/0:10,0:11:23.75:0,24,302	0/0:24,0:24:55.77:0,56,671	0/0:18,0:18:34.31:0,34,422	0/0:26,0:26:77.60:0,78,890	0/0:19,0:19:51.58:0,52,643	0/0:15,0:14:33.02:0,33,367
chr10	39548029	.	T	TG	2245.22	PASS	AB=0.898;AC=11;AF=0.196;AN=56;BaseQRankSum=3.316;DP=649;FS=8.478;HRun=0;HaplotypeScore=99.4655;InbreedingCoeff=-0.2448;MQ=51.19;MQ0=17;MQRankSum=0.272;QD=8.02;ReadPosRankSum=2.436;VQSLOD=3.3454;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:23,14:37:99:637,0,585	0/1:7,3:10:67.75:154,0,68	0/0:10,0:2:3.01:0,3,42	0/0:10,0:8:18.05:0,18,220	0/1:34,0:33:99:257,0,532	0/0:20,0:20:45.40:0,45,539	0/0:22,0:22:63.19:0,63,861	0/0:22,0:15:42.07:0,42,562	0/1:31,0:30:99:218,0,480	0/1:20,6:26:99:222,0,534	0/1:8,4:11:99:116,0,223	0/0:22,0:20:56.86:0,57,751	0/1:26,0:26:2.35:2,0,556	0/0:37,0:37:79.83:0,80,944	0/0:43,0:41:68.70:0,69,919	0/1:36,0:36:99:167,0,808	0/1:20,0:19:88.13:88,0,416	0/1:21,6:27:99:270,0,532	0/0:14,0:8:21.93:0,22,249	0/0:18,0:18:48.04:0,48,547	0/0:43,0:42:99:0,120,1504	0/1:21,0:21:99:257,0,202	0/0:9,0:9:18.06:0,18,247	0/0:24,0:24:61.83:0,62,772	0/0:15,0:15:20.95:0,21,230	0/0:27,0:27:64.35:0,64,911	0/0:19,0:19:54.07:0,54,660	0/0:14,0:13:33.01:0,33,369
chr10	39549927	.	G	GA	5214.17	PASS	AB=1.000;AC=30;AF=0.536;AN=56;BaseQRankSum=4.754;DP=607;FS=8.719;HRun=16;HaplotypeScore=109.7059;InbreedingCoeff=0.8726;MQ=60.18;MQ0=20;MQRankSum=-1.942;QD=15.47;ReadPosRankSum=1.335;VQSLOD=4.5118;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:43:95.42:0,95,834	0/0:9,0:8:20.92:0,21,175	0/1:46,0:12:2.02:2,0,98	0/1:36,0:16:29.70:30,0,36	1/1:10,8:19:49.33:511,49,0	1/1:12,8:20:42.51:443,43,0	1/1:17,6:22:62.74:636,63,0	0/0:25,0:24:57.88:0,58,515	1/1:11,9:20:37.84:395,38,0	0/0:30,0:28:56.74:0,57,560	0/0:19,0:19:47.94:0,48,420	1/1:13,3:15:17.96:168,18,0	1/1:8,0:12:26.49:131,26,0	1/1:11,0:13:8.38:50,8,0	1/1:7,9:16:22.57:339,23,0	1/1:8,8:16:32.57:341,33,0	1/1:6,28:34:73.89:786,74,0	0/0:23,0:22:34.14:0,34,286	0/0:20,0:20:50.18:0,50,417	0/0:19,0:19:47.97:0,48,425	0/0:12,0:12:29.65:0,30,233	1/1:5,7:12:24.03:258,24,0	1/1:6,6:12:29.94:268,30,0	1/1:10,11:21:42.08:466,42,0	1/1:10,7:18:38.65:390,39,0	0/0:26,0:25:65.97:0,66,583	0/0:25,0:25:56.61:0,57,479	0/0:18,0:18:50.98:0,51,458
chr10	39549948	.	CGT	C	969.63	PASS	AB=0.909;AC=22;AF=0.407;AN=54;BaseQRankSum=-4.143;DP=525;FS=0.736;HRun=0;HaplotypeScore=146.8097;InbreedingCoeff=0.0774;MQ=58.29;MQ0=20;MQRankSum=1.648;QD=3.26;ReadPosRankSum=3.383;VQSLOD=2.4438;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:9.38:0,9,129	0/0:9,0:8:5.83:0,6,66	0/0:31,0:8:0:0,0,0	./.	0/0:20,0:20:2.04:0,2,6	0/1:16,0:15:8.51:9,0,21	0/1:18,0:17:18.62:19,0,40	0/0:24,0:24:2.80:0,3,13	0/0:15,0:17:3.48:0,3,45	0/1:19,1:19:6.03:6,0,171	0/0:16,0:15:5.69:0,6,47	0/1:7,0:7:1.70:15,0,2	1/1:9,2:11:4.63:111,5,0	0/1:9,2:11:21:21,0,52	0/1:19,0:18:10.46:10,0,13	0/1:13,0:14:0.98:1,0,10	0/1:27,0:26:4.14:4,0,31	0/0:16,0:16:8.89:0,9,65	1/1:16,1:20:14.44:105,14,0	0/1:7,6:14:23.68:156,0,24	1/1:9,7:16:14.87:144,15,0	0/0:12,0:11:6.55:0,7,29	0/1:13,2:15:2.31:20,0,2	0/0:19,1:20:0.47:0,0,2	0/1:19,3:20:2.44:39,0,2	1/1:13,3:18:14.71:126,15,0	0/1:13,8:21:3.36:123,0,3	1/1:15,8:22:3.96:208,4,0
chr10	39549981	.	G	GTA	691.16	PASS	AB=0.966;AC=17;AF=0.304;AN=56;BaseQRankSum=6.272;DP=592;FS=0.000;HRun=0;HaplotypeScore=157.7040;InbreedingCoeff=0.1571;MQ=41.88;MQ0=28;MQRankSum=-1.952;QD=2.39;ReadPosRankSum=2.121;VQSLOD=2.6502;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:31,1:30:27.03:27,0,123	1/1:11,0:10:0.09:17,0,0	0/0:30,0:9:25.20:0,25,169	0/0:35,0:7:14.90:0,15,112	0/0:17,0:17:11.85:0,12,87	1/1:14,3:16:11.67:113,12,0	0/1:29,2:26:3.60:71,0,4	0/0:23,0:17:45.84:0,46,391	0/0:21,0:21:0.45:0,0,55	0/1:23,0:22:99:196,0,143	0/1:18,0:17:8.48:8,0,70	0/1:15,2:16:8.60:81,0,9	0/0:11,0:11:18.27:0,18,126	0/1:19,0:18:15.63:16,0,87	0/0:19,0:18:5.85:0,6,49	0/0:17,0:17:8.77:0,9,66	0/1:30,0:28:8.07:8,0,177	0/1:17,0:16:30.04:30,0,92	0/0:15,0:15:37.06:0,37,277	0/0:15,0:15:32.92:0,33,283	0/0:23,0:21:35.77:0,36,278	0/0:18,0:17:5.68:0,6,41	1/1:16,3:18:6.02:103,6,0	1/1:17,5:21:11.62:106,12,0	0/1:29,4:31:10.39:79,0,10	0/0:23,0:22:48.20:0,48,504	0/0:19,0:19:37.95:0,38,263	0/0:17,0:16:38.82:0,39,303
chr10	39549985	.	G	GTA	352.38	PASS	AB=0.979;AC=11;AF=0.196;AN=56;BaseQRankSum=6.289;DP=602;FS=2.284;HRun=0;HaplotypeScore=158.6938;InbreedingCoeff=0.2533;MQ=44.24;MQ0=27;MQRankSum=-0.150;QD=1.81;ReadPosRankSum=3.108;VQSLOD=2.3778;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:35,0:33:17.41:17,0,32	1/1:8,3:10:9.01:110,9,0	0/0:36,0:11:29.60:0,30,225	0/0:38,0:10:13.92:0,14,171	0/0:17,0:17:8.98:0,9,73	0/1:17,0:16:6.11:39,0,6	0/0:31,0:26:7.58:0,8,76	0/0:23,0:17:38.68:0,39,374	0/0:21,0:21:11.49:0,11,86	0/1:24,0:23:29.58:74,0,30	0/0:16,0:15:10.37:0,10,60	0/1:17,0:16:2.61:34,0,3	0/0:11,0:11:15.27:0,15,101	0/0:19,0:18:3.97:0,4,74	0/0:19,0:18:8.69:0,9,63	0/0:16,0:16:8.76:0,9,65	0/0:29,0:27:37:0,37,242	0/1:14,3:16:3.83:169,0,4	0/0:11,0:11:22.97:0,23,195	0/0:16,0:16:35.92:0,36,307	0/0:22,0:20:35.80:0,36,282	0/0:19,0:18:5.69:0,6,43	1/1:20,0:19:5.90:37,6,0	0/1:22,0:21:1.14:1,0,22	0/1:32,0:30:13.89:15,0,14	0/0:26,0:25:65.14:0,65,567	0/0:20,0:20:41.64:0,42,298	0/0:17,0:16:35.83:0,36,280
chr10	39549987	.	G	GTA	533.65	PASS	AB=0.969;AC=15;AF=0.268;AN=56;BaseQRankSum=6.522;DP=622;FS=2.951;HRun=0;HaplotypeScore=156.6726;InbreedingCoeff=0.0825;MQ=44.24;MQ0=28;MQRankSum=-0.268;QD=2.00;ReadPosRankSum=2.076;VQSLOD=2.7986;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:35:8.05:0,8,162	1/1:11,0:10:1.36:18,1,0	0/0:37,0:11:29.76:0,30,242	0/0:41,0:12:18.07:0,18,188	0/0:18,0:18:8.98:0,9,73	1/1:16,1:16:1.15:83,1,0	0/1:32,0:27:49.58:50,0,62	0/0:21,0:15:22.60:0,23,303	0/0:22,0:22:7.97:0,8,64	0/1:25,0:24:99:243,0,124	0/0:13,0:12:8.80:0,9,72	0/1:17,1:17:5.84:36,0,6	0/0:11,0:11:14.55:0,15,88	0/1:20,0:19:16.79:17,0,53	0/1:21,0:20:3.87:4,0,40	0/0:18,0:18:8.77:0,9,66	0/1:29,0:27:21.61:22,0,146	0/1:17,0:16:17.15:24,0,17	0/0:11,0:11:7.01:0,7,188	0/0:16,0:16:35.89:0,36,304	0/0:22,0:20:35.78:0,36,279	0/0:20,0:20:5.69:0,6,43	1/1:18,2:19:5.92:39,6,0	0/1:20,4:23:8.66:89,0,9	0/1:30,2:31:4.59:62,0,5	0/0:26,0:25:35.36:0,35,482	0/0:26,0:26:53.81:0,54,383	0/0:16,0:15:35.37:0,35,266
chr10	39549991	.	GTA	G	1037.01	PASS	AB=0.985;AC=28;AF=0.500;AN=56;BaseQRankSum=4.373;DP=642;FS=26.326;HRun=0;HaplotypeScore=148.8507;InbreedingCoeff=-0.2834;MQ=44.42;MQ0=27;MQRankSum=-1.195;QD=1.84;ReadPosRankSum=2.771;VQSLOD=1.0856;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:35,1:34:9.99:10,0,96	0/1:11,0:10:12.04:12,0,44	0/1:42,0:13:64.65:65,0,164	0/1:44,0:16:58.92:97,0,59	0/1:16,0:16:4.88:18,0,5	1/1:19,0:18:2.59:38,3,0	0/1:31,0:26:5.60:29,0,6	0/0:25,0:19:45.44:0,45,402	0/1:24,0:24:3.79:4,0,13	0/1:24,0:23:95.56:109,0,96	0/0:11,0:10:7.38:0,7,22	1/1:21,0:20:5.73:20,6,0	1/1:10,3:13:11.85:136,12,0	0/1:23,0:22:12.41:21,0,12	0/1:20,1:20:3.09:66,0,3	0/1:19,0:19:2.91:60,0,3	1/1:26,1:25:25.95:224,26,0	0/0:14,0:13:8.19:0,8,43	0/1:12,0:12:21.39:21,0,145	0/1:16,0:16:24.47:24,0,118	0/1:22,0:20:29.76:30,0,135	0/1:18,4:22:3.15:17,0,3	0/1:21,0:20:2.79:3,0,9	0/1:22,0:21:7.49:7,0,9	0/1:37,0:34:3.25:3,0,30	0/0:27,1:27:15.46:0,15,434	0/1:23,2:25:78.64:79,0,224	0/1:16,0:15:93.69:100,0,94
chr10	39549993	.	ATG	A	781.57	PASS	AB=0.853;AC=18;AF=0.321;AN=56;BaseQRankSum=5.245;DP=657;FS=17.057;HRun=0;HaplotypeScore=150.5961;InbreedingCoeff=0.0119;MQ=44.66;MQ0=26;MQRankSum=-2.762;QD=2.35;ReadPosRankSum=3.851;VQSLOD=1.7136;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,1:37:1.13:0,1,14	0/0:11,0:10:9.08:0,9,35	0/0:43,0:14:21.34:0,21,377	0/0:43,0:17:17.89:0,18,292	0/0:16,0:16:4.07:0,4,12	0/1:11,8:18:10.33:96,0,10	0/1:31,0:27:8.46:8,0,21	0/0:25,0:19:54.18:0,54,870	0/1:9,16:25:11.19:11,0,37	1/1:22,1:22:10.18:408,10,0	0/1:11,0:10:5.03:5,0,9	1/1:21,1:21:1.03:44,1,0	0/1:13,0:13:5.27:40,0,5	0/1:10,14:23:15.04:34,0,15	0/1:21,0:20:5.87:39,0,6	0/1:19,0:19:1.97:2,0,10	0/1:20,7:25:20.71:162,0,21	0/1:6,7:12:4.10:4,0,8	0/0:12,0:12:32.92:0,33,396	0/0:15,0:15:31.55:0,32,325	0/0:24,0:22:36.49:0,36,400	0/0:24,0:24:9.95:0,10,39	0/1:22,2:23:13.75:29,0,14	1/1:24,1:24:3.17:39,3,0	0/1:33,3:33:12.54:13,0,20	0/0:28,0:27:40.09:0,40,1004	0/0:25,0:25:7.23:0,7,539	0/0:16,0:15:6.52:0,7,241
chr10	39549995	.	G	GTGTA	2805.61	PASS	AB=0.869;AC=30;AF=0.536;AN=56;BaseQRankSum=6.922;DP=699;FS=8.763;HRun=0;HaplotypeScore=164.0185;InbreedingCoeff=0.5482;MQ=45.50;MQ0=25;MQRankSum=-3.223;QD=6.74;ReadPosRankSum=2.374;VQSLOD=2.1478;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:14,31:45:6.75:93,7,0	1/1:3,7:9:6.02:131,6,0	0/0:46,0:16:44:0,44,554	0/0:48,0:19:42.30:0,42,525	0/0:9,8:18:0:0,0,0	0/1:18,1:18:5.66:248,0,6	0/1:11,21:30:12.60:36,0,13	0/0:25,0:19:54.19:0,54,975	0/1:25,0:25:4.28:4,0,28	1/1:7,16:23:47.36:952,47,0	1/1:2,10:11:3.01:80,3,0	1/1:8,14:22:7.53:75,8,0	1/1:7,8:16:5:188,5,0	1/1:24,0:23:7.74:152,8,0	1/1:11,12:23:5.97:75,6,0	1/1:7,13:21:5.96:31,6,0	0/1:25,2:25:7.47:272,0,7	1/1:10,3:12:9.03:242,9,0	0/0:12,0:12:34.31:0,34,533	0/0:15,0:15:34.14:0,34,538	0/0:26,0:24:42.84:0,43,615	0/0:8,15:25:3.84:0,4,21	1/1:7,18:24:6.02:114,6,0	1/1:8,21:31:6.01:144,6,0	1/1:11,29:37:6.02:156,6,0	0/0:28,0:27:16.46:0,16,1217	0/0:25,0:25:53.74:0,54,870	0/0:15,0:15:36:0,36,607
chr10	39549999	.	GTA	G	259.06	PASS	AB=0.988;AC=13;AF=0.232;AN=56;BaseQRankSum=6.424;DP=720;FS=18.155;HRun=0;HaplotypeScore=160.9699;InbreedingCoeff=-0.1186;MQ=45.81;MQ0=24;MQRankSum=-1.985;QD=0.85;ReadPosRankSum=3.071;VQSLOD=1.4998;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:43,1:42:2.88:3,0,139	0/0:9,1:9:9.96:0,10,68	0/0:48,0:17:41.52:0,42,640	0/0:53,0:23:53.38:0,53,655	0/1:19,0:19:7.86:8,0,70	0/1:20,0:19:25.35:25,0,28	0/0:35,0:31:12.80:0,13,73	0/0:27,0:21:60.19:0,60,1088	0/1:25,1:26:20.42:20,0,53	0/1:24,0:23:99:119,0,104	0/0:12,0:11:6.71:0,7,20	1/1:23,0:22:7.41:58,7,0	0/1:16,0:16:6.39:45,0,6	0/0:27,0:27:5.02:0,5,96	0/0:24,0:23:0.75:0,1,33	0/1:20,0:20:5.43:5,0,30	0/1:28,0:26:75.95:89,0,76	0/0:14,0:13:8.03:0,8,60	0/0:12,0:12:32.53:0,33,497	0/0:15,0:15:42:0,42,528	0/0:28,0:26:53.63:0,54,716	0/1:26,0:26:12.26:12,0,30	0/0:26,0:25:5.52:0,6,43	0/1:32,0:31:3.01:3,0,52	0/0:38,1:36:11.30:0,11,68	0/0:30,0:29:69.06:0,69,1333	0/1:24,2:26:12.69:13,0,715	0/0:15,0:15:3.97:0,4,394
chr10	39551647	.	GTGAAAGCT	G	19551.95	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=17.868;DP=665;FS=1.760;HRun=0;HaplotypeScore=194.2099;InbreedingCoeff=0.9979;MQ=73.54;MQ0=0;MQRankSum=-19.282;QD=56.67;ReadPosRankSum=0.844;VQSLOD=4.4728;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,129,5447	0/0:9,0:9:27.09:0,27,1100	0/0:19,0:19:54.18:0,54,1852	0/0:21,0:21:57.17:0,57,2158	1/1:0,22:22:41.27:971,41,0	1/1:0,17:17:30.10:760,30,0	1/1:0,29:29:69.24:1936,69,0	0/0:30,0:30:81.27:0,81,3276	1/1:1,20:21:48.16:1310,48,0	0/0:23,0:23:63.21:0,63,2691	0/0:18,0:18:54.19:0,54,2302	1/1:3,26:29:60.20:1620,60,0	1/1:2,30:33:84.25:2389,84,0	1/1:0,28:28:81.28:2233,81,0	1/1:0,37:37:99:2569,99,0	1/1:0,29:29:69.24:1827,69,0	1/1:5,16:21:21.07:569,21,0	0/0:36,0:36:99:0,105,4468	0/0:11,0:11:33.11:0,33,1345	0/0:19,0:19:57.18:0,57,2326	0/0:31,0:31:93.32:0,93,4110	1/1:1,23:24:45.15:1241,45,0	1/1:2,8:10:18.06:482,18,0	1/1:8,24:32:32.12:903,32,0	1/1:2,11:13:27.09:741,27,0	0/0:23,0:23:69.24:0,69,2866	0/0:21,0:21:63.22:0,63,2817	0/0:15,0:15:42.14:0,42,1878
chr10	39552882	.	AG	A	5892.74	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=11.161;DP=796;FS=4.344;HRun=3;HaplotypeScore=84.0224;InbreedingCoeff=0.9989;MQ=64.26;MQ0=0;MQRankSum=-1.380;QD=34.46;ReadPosRankSum=3.533;VQSLOD=5.5108;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,62:63:99:2135,166,0	1/1:1,16:17:23.16:540,23,0	0/0:30,0:29:64.30:0,64,956	0/0:30,0:30:78.17:0,78,1080	0/0:29,0:29:87.26:0,87,1262	0/0:20,0:20:60.18:0,60,857	0/0:25,0:25:75.21:0,75,1046	0/0:38,0:38:99:0,111,1572	0/0:21,0:21:63.19:0,63,920	1/1:0,34:34:99:1293,102,0	1/1:0,19:19:54.18:701,54,0	0/0:36,0:36:99:0,108,1497	0/0:27,0:27:75.21:0,75,1063	0/0:21,0:21:63.20:0,63,921	0/0:41,0:41:99:0,123,1737	0/0:31,0:31:87.25:0,87,1266	0/0:37,0:37:99:0,102,1457	1/1:0,38:38:96.27:1223,96,0	0/0:22,0:22:66.21:0,66,963	0/0:21,0:21:60.16:0,60,823	0/0:48,0:48:99:0,138,2000	0/0:25,0:25:66.21:0,66,969	0/0:14,0:14:42.12:0,42,589	0/0:37,0:37:99:0,105,1554	0/0:13,0:13:36.12:0,36,538	0/0:26,1:27:42.31:0,42,1111	0/0:24,0:24:72.21:0,72,1038	0/0:8,0:8:24.08:0,24,360
chr10	39552987	.	G	GCTTA	25649.19	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-7.744;DP=607;FS=1.975;HRun=0;HaplotypeScore=99.6597;InbreedingCoeff=0.9793;MQ=71.95;MQ0=1;MQRankSum=-7.265;QD=62.56;ReadPosRankSum=5.725;VQSLOD=6.7670;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,31:33:81.28:2110,81,0	1/1:3,6:10:26.96:497,27,0	0/0:13,0:13:22.40:0,22,531	0/0:13,0:13:29.88:0,30,518	1/1:3,16:18:36.04:888,36,0	1/1:0,9:9:27.09:698,27,0	1/1:7,14:22:57.11:1345,57,0	0/0:34,0:34:93.26:0,93,1534	1/1:3,10:13:30.10:789,30,0	1/1:2,24:26:75.26:2007,75,0	1/1:0,12:12:32.94:677,33,0	1/1:3,17:18:45.15:1122,45,0	1/1:3,25:28:71.96:1909,72,0	1/1:4,20:25:54.19:1424,54,0	1/1:4,26:31:65.81:1752,66,0	1/1:2,23:27:69.24:1811,69,0	1/1:5,33:38:99:2663,102,0	1/1:1,26:27:78.18:2025,78,0	0/0:29,0:29:78.26:0,78,1427	0/0:15,0:15:42.14:0,42,767	0/0:55,0:55:99:0,166,3057	1/1:1,25:29:75.26:1939,75,0	1/1:1,6:7:15.05:366,15,0	1/1:2,19:20:42.13:1110,42,0	1/1:1,6:8:21.07:517,21,0	0/0:26,0:26:75.25:0,75,1379	0/0:10,0:9:30.10:0,30,569	0/0:2,0:2:6.02:0,6,114
chr10	39553133	.	AAT	A	6985.52	PASS	AB=0.902;AC=28;AF=0.667;AN=42;BaseQRankSum=10.788;DP=437;FS=6.853;HRun=0;HaplotypeScore=70.2840;InbreedingCoeff=0.7168;MQ=65.76;MQ0=0;MQRankSum=-1.056;QD=22.68;ReadPosRankSum=5.097;VQSLOD=4.9865;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,27:32:72.23:880,72,0	1/1:3,12:15:33.10:403,33,0	./.	0/0:8,0:7:5.49:0,5,76	1/1:5,19:25:50.95:584,51,0	./.	./.	0/0:30,2:32:7.91:0,8,1111	1/1:3,5:8:15.05:183,15,0	1/1:5,16:21:48.12:563,48,0	1/1:7,16:24:47.94:547,48,0	./.	1/1:2,15:17:45.14:550,45,0	1/1:5,17:22:39.12:477,39,0	1/1:4,13:18:35.94:417,36,0	1/1:4,6:11:8.80:87,9,0	1/1:9,37:46:99:1247,102,0	1/1:5,21:26:60.19:731,60,0	0/0:17,0:20:45.07:0,45,650	0/0:14,0:14:30.09:0,30,457	0/0:8,0:8:15.01:0,15,215	1/1:2,8:10:24.08:293,24,0	./.	./.	./.	0/1:23,2:26:4.13:4,0,919	0/0:13,1:14:2.45:0,2,524	0/1:6,1:7:18.61:19,0,225
chr10	39553557	.	C	CGGAAAAA	36239.74	PASS	AB=0.952;AC=39;AF=0.696;AN=56;BaseQRankSum=-8.030;DP=608;FS=1.921;HRun=0;HaplotypeScore=115.1436;InbreedingCoeff=0.9143;MQ=61.64;MQ0=0;MQRankSum=-17.986;QD=86.08;ReadPosRankSum=0.960;VQSLOD=5.6161;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,15:26:54.18:2026,54,0	1/1:2,7:10:24.08:896,24,0	0/0:12,0:12:26.95:0,27,565	0/0:16,0:14:36.12:0,36,835	1/1:6,24:32:81.28:3094,81,0	1/1:2,22:32:66.23:2696,66,0	1/1:4,13:21:42.14:1649,42,0	0/0:36,0:36:99:0,102,2451	1/1:3,19:24:63.22:2507,63,0	1/1:5,10:22:57.18:2065,57,0	1/1:4,12:15:45.15:1714,45,0	1/1:2,10:15:24.08:895,24,0	1/1:3,11:17:42.14:1607,42,0	1/1:4,13:20:45.15:1717,45,0	1/1:5,19:26:69.24:2661,69,0	1/1:4,14:22:51.18:1981,51,0	1/1:5,11:19:48.16:1861,48,0	1/1:2,9:18:33.11:1349,33,0	0/0:30,0:29:74.05:0,74,1969	0/0:29,0:29:72.25:0,72,1898	0/0:13,0:13:39.12:0,39,952	1/1:1,11:19:39.13:1473,39,0	1/1:3,21:29:69.24:2764,69,0	1/1:3,8:11:24.08:980,24,0	1/1:2,17:20:54.19:2145,54,0	0/1:19,0:20:99:160,0,1318	0/0:36,0:36:99:0,108,2758	0/0:15,0:15:45.15:0,45,1145
chr10	39553715	.	G	GA	2192.20	PASS	AB=0.705;AC=11;AF=0.196;AN=56;BaseQRankSum=-6.230;DP=627;FS=15.815;HRun=10;HaplotypeScore=63.9888;InbreedingCoeff=0.6368;MQ=64.49;MQ0=0;MQRankSum=-0.557;QD=15.33;ReadPosRankSum=0.718;VQSLOD=2.3854;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,2:34:19.92:0,20,576	0/0:13,1:15:6.58:0,7,243	0/0:23,0:21:12.97:0,13,144	0/0:19,0:17:20.52:0,21,147	0/0:26,0:28:75.94:0,76,597	1/1:4,25:31:22.56:618,23,0	1/1:4,16:22:20.48:433,20,0	0/0:24,1:27:24.83:0,25,390	0/0:20,0:20:56.91:0,57,466	0/0:17,0:17:32.08:0,32,268	0/0:23,0:23:53.93:0,54,443	1/1:4,17:21:25.28:428,25,0	0/0:29,0:29:83.90:0,84,689	0/0:19,0:19:53.94:0,54,443	0/0:20,0:20:53.93:0,54,443	0/0:19,0:19:47.92:0,48,394	0/0:24,0:25:64.95:0,65,523	0/0:24,0:25:70.94:0,71,572	0/1:22,3:25:34.02:34,0,360	0/0:17,0:19:51.98:0,52,399	0/0:30,1:31:51.88:0,52,632	0/0:21,0:21:56.93:0,57,468	0/1:4,7:12:26.08:188,0,26	1/1:2,18:21:47.95:494,48,0	0/1:3,7:10:25.20:168,0,25	0/0:20,0:20:50.93:0,51,418	0/0:32,0:32:89.87:0,90,735	0/0:18,0:18:44.94:0,45,369
chr10	39554168	.	T	TA	1789.58	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=-6.480;DP=441;FS=1.032;HRun=11;HaplotypeScore=51.5715;InbreedingCoeff=0.8955;MQ=74.78;MQ0=0;MQRankSum=-0.154;QD=15.56;ReadPosRankSum=-0.044;VQSLOD=3.9756;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:39:99:0,110,837	0/0:6,0:6:14.93:0,15,114	0/1:19,0:16:0.21:0,0,95	0/0:9,0:8:4.67:0,5,46	0/0:22,0:22:50.74:0,51,395	1/1:7,15:23:34.73:369,35,0	1/1:0,6:7:14.19:177,14,0	0/0:25,0:25:56.72:0,57,438	0/0:6,0:6:11.93:0,12,93	0/0:17,1:18:39.30:0,39,302	0/0:9,0:11:27.98:0,28,197	1/1:3,8:11:24.05:244,24,0	0/0:8,0:8:20.92:0,21,162	0/0:9,0:10:28.93:0,29,215	0/0:20,0:20:41.29:0,41,306	0/0:10,0:10:26.90:0,27,209	0/0:20,0:20:44.75:0,45,344	0/0:23,0:23:65.73:0,66,509	0/0:22,0:22:44.39:0,44,332	0/0:19,0:19:29.82:0,30,230	0/0:6,0:6:14.94:0,15,115	0/0:15,0:15:38.69:0,39,284	1/1:3,21:24:48.09:454,48,0	1/1:1,10:11:30.06:304,30,0	1/1:1,18:19:42.08:425,42,0	0/0:16,1:18:10.22:0,10,252	0/0:11,0:11:29.89:0,30,232	0/0:8,0:8:20.92:0,21,163
chr10	39554469	.	C	CTCTGACG	36000.10	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-8.450;DP=677;FS=1.038;HRun=0;HaplotypeScore=145.3203;InbreedingCoeff=0.9952;MQ=68.17;MQ0=0;MQRankSum=-18.649;QD=79.47;ReadPosRankSum=2.317;VQSLOD=5.0795;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,22:41:69.24:2765,69,0	1/1:2,5:10:15.05:602,15,0	0/0:17,0:17:45.05:0,45,917	0/0:27,0:28:22.28:0,22,1223	1/1:3,13:19:33.11:1319,33,0	1/1:1,14:18:45.15:1807,45,0	1/1:4,18:28:54.19:2168,54,0	0/0:28,0:28:81.27:0,81,2003	1/1:2,15:23:45.15:1806,45,0	1/1:2,19:27:72.16:2701,72,0	1/1:3,5:13:18.06:722,18,0	1/1:2,25:31:75.26:2918,75,0	1/1:0,26:36:78.27:3129,78,0	1/1:3,23:33:63.17:2529,63,0	1/1:4,19:29:62.91:2493,63,0	1/1:6,21:32:69.24:2770,69,0	1/1:3,10:17:36.12:1430,36,0	1/1:3,12:19:36.12:1448,36,0	0/0:26,0:26:78.27:0,78,1962	0/0:21,0:21:63.22:0,63,1660	0/0:44,0:44:99:0,123,3135	1/1:2,16:22:48.16:1921,48,0	1/1:1,12:18:33.11:1313,33,0	1/1:4,10:20:23.75:955,24,0	1/1:1,10:16:30.10:1204,30,0	0/0:22,0:22:66.23:0,66,1715	0/0:26,0:26:75.26:0,75,1957	0/0:12,0:12:36.12:0,36,838
chr10	39557786	.	GGA	G	123.67	PASS	AC=6;AF=0.125;AN=48;BaseQRankSum=3.743;DP=151;FS=4.021;HRun=0;HaplotypeScore=30.2673;InbreedingCoeff=0.4375;MQ=46.18;MQ0=12;MQRankSum=-2.857;QD=8.83;ReadPosRankSum=0.460;VQSLOD=2.8198;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:17:40.88:0,41,543	0/0:3,0:3:3.43:0,3,42	0/0:7,0:3:9.02:0,9,121	0/0:14,0:2:6.01:0,6,62	0/0:5,0:3:3.01:0,3,36	0/0:1,0:1:1.82:0,2,5	1/1:4,1:4:2.94:45,3,0	0/0:13,0:11:26.57:0,27,398	0/0:3,0:2:3.01:0,3,55	0/0:2,0:2:6.02:0,6,79	./.	1/1:3,2:4:11.97:148,12,0	0/0:2,0:2:3.01:0,3,37	0/0:6,0:6:4.26:0,4,44	0/0:3,0:3:9.02:0,9,109	0/0:7,0:7:6.49:0,6,84	0/0:7,0:7:13.59:0,14,168	0/0:7,0:7:17.97:0,18,209	0/0:5,0:2:6.01:0,6,84	./.	0/0:12,0:12:21.04:0,21,334	0/0:4,0:4:5.74:0,6,58	./.	./.	1/1:3,1:4:2.96:40,3,0	0/0:6,0:5:15.05:0,15,226	0/0:3,0:3:9.03:0,9,140	0/0:5,0:5:15.05:0,15,251
chr10	39557799	.	GAGGGAGGA	G	1741.14	PASS	AB=1.000;AC=33;AF=0.611;AN=54;BaseQRankSum=3.999;DP=178;FS=32.115;HRun=0;HaplotypeScore=50.0504;InbreedingCoeff=0.7004;MQ=71.05;MQ0=6;MQRankSum=-1.251;QD=17.59;ReadPosRankSum=-0.764;VQSLOD=0.5632;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,4:18:37.66:518,38,0	0/0:2,0:2:0.94:0,1,1	0/1:7,0:7:2.65:3,0,69	0/0:12,0:8:15.14:0,15,162	1/1:0,6:6:8.88:58,9,0	1/1:2,0:2:5.89:37,6,0	1/1:6,0:5:10.71:60,11,0	0/0:18,0:16:33.79:0,34,691	1/1:2,0:1:3.01:49,3,0	1/1:2,0:2:6.01:57,6,0	1/1:2,0:2:5.99:50,6,0	1/1:6,0:5:11.65:85,12,0	1/1:7,0:7:20.95:175,21,0	0/0:6,0:6:2.74:0,3,12	1/1:3,0:3:8.99:77,9,0	1/1:0,6:6:3.01:86,3,0	1/1:6,0:6:14.90:125,15,0	1/1:10,0:10:22.14:234,22,0	0/0:7,0:6:17.98:0,18,154	0/0:2,0:2:3:0,3,27	0/0:13,0:13:28.76:0,29,511	1/1:5,1:6:14.93:117,15,0	./.	1/1:2,0:1:3:26,3,0	1/1:8,0:8:20.89:173,21,0	0/0:9,0:8:24.05:0,24,401	0/0:3,0:3:8.98:0,9,128	0/0:5,0:5:15.02:0,15,312
chr10	39557803	.	GAGGA	G	1622.34	PASS	AB=1.000;AC=36;AF=0.643;AN=56;BaseQRankSum=4.531;DP=194;FS=20.816;HRun=0;HaplotypeScore=43.5106;InbreedingCoeff=0.6708;MQ=70.80;MQ0=4;MQRankSum=-2.208;QD=13.63;ReadPosRankSum=0.469;VQSLOD=1.2127;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:22:40.04:327,40,0	1/1:3,0:3:2.47:24,2,0	0/1:7,0:7:2.57:3,0,48	0/0:13,0:9:17.06:0,17,171	1/1:6,0:6:8.88:58,9,0	1/1:3,0:3:8.86:57,9,0	1/1:6,0:5:13.93:73,14,0	0/0:17,0:15:45.05:0,45,565	1/1:3,0:3:5.99:50,6,0	1/1:3,0:3:9.01:85,9,0	0/1:3,0:3:3.99:41,0,4	1/1:6,0:5:14.42:83,14,0	1/1:7,0:7:20.95:175,21,0	1/1:0,6:6:3.01:58,3,0	1/1:4,0:4:12:104,12,0	1/1:6,0:6:3.01:37,3,0	1/1:7,0:7:12.73:107,13,0	1/1:9,0:9:26.88:210,27,0	0/0:8,0:8:20.99:0,21,182	0/0:2,0:2:3:0,3,27	0/0:14,0:14:32.80:0,33,359	1/1:6,0:6:14.93:117,15,0	0/0:2,0:2:0.89:0,1,2	1/1:2,0:1:3:26,3,0	1/1:10,0:10:23.78:177,24,0	0/0:8,0:7:21.04:0,21,271	0/0:3,0:3:8.94:0,9,89	0/0:8,0:8:24.01:0,24,335
chr10	39557821	.	GT	G	849.39	PASS	AC=10;AF=0.185;AN=54;BaseQRankSum=5.829;DP=237;FS=8.647;HRun=2;HaplotypeScore=45.3355;InbreedingCoeff=0.8212;MQ=82.03;MQ0=0;MQRankSum=-3.711;QD=31.46;ReadPosRankSum=0.970;VQSLOD=2.3810;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:66.14:0,66,939	0/0:1,0:1:3.01:0,3,45	0/0:12,0:12:27.02:0,27,313	0/0:16,0:13:21.28:0,21,358	0/0:9,0:9:24.08:0,24,359	1/1:0,4:4:9.03:117,9,0	1/1:0,6:6:18.06:233,18,0	0/0:25,0:25:72.24:0,72,1070	0/0:5,0:5:15.05:0,15,218	0/0:3,0:3:9.03:0,9,135	0/0:3,0:3:9.03:0,9,134	1/1:0,5:5:15.05:194,15,0	0/0:8,0:8:24.08:0,24,358	0/0:6,0:6:3.01:0,3,44	0/0:4,0:4:12.04:0,12,180	0/0:7,0:7:6.02:0,6,90	0/0:11,0:11:30.10:0,30,449	0/0:12,0:12:33.11:0,33,489	0/0:9,0:9:27.09:0,27,392	0/0:5,0:5:15.05:0,15,225	0/0:14,0:14:35.82:0,36,536	0/0:9,0:9:24.08:0,24,355	./.	1/1:0,3:3:9.03:117,9,0	1/1:0,9:9:27.09:350,27,0	0/0:8,0:8:24.07:0,24,341	0/0:6,0:6:12.04:0,12,180	0/0:8,0:8:24.08:0,24,360
chr10	39558051	.	CCCCCCT	C	3737.67	PASS	AB=1.000;AC=17;AF=0.315;AN=54;BaseQRankSum=5.806;DP=292;FS=2.789;HRun=0;HaplotypeScore=78.9960;InbreedingCoeff=0.4896;MQ=82.27;MQ0=1;MQRankSum=-7.920;QD=29.90;ReadPosRankSum=4.653;VQSLOD=3.1719;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:8.99:0,9,143	0/0:2,0:2:3.01:0,3,55	0/0:21,0:17:36:0,36,751	0/0:28,0:22:17.46:0,17,1005	0/1:5,0:5:14.56:19,0,15	1/1:2,23:25:60.15:1280,60,0	1/1:2,14:16:39.09:816,39,0	0/0:28,0:28:57.11:0,57,1392	0/0:4,0:4:3.01:0,3,39	0/1:2,0:2:10.52:11,0,60	./.	1/1:1,15:16:21.07:464,21,0	0/1:6,0:6:8.98:9,0,78	0/0:4,0:4:9.02:0,9,160	0/0:4,0:4:12.02:0,12,184	0/1:9,0:9:10.19:10,0,249	0/1:9,0:9:2.91:3,0,199	0/0:7,0:7:21.03:0,21,387	0/0:9,0:9:21.05:0,21,502	0/0:5,0:5:6.01:0,6,136	0/0:18,0:18:40.31:0,40,1130	0/0:1,0:1:2.99:0,3,23	1/1:1,16:17:27.09:568,27,0	1/1:1,9:10:9.03:199,9,0	1/1:3,7:10:18.06:359,18,0	0/0:13,0:13:23.67:0,24,469	0/0:9,0:9:21.05:0,21,649	0/0:3,0:3:9.03:0,9,292
chr10	39558056	.	CT	C	1684.81	PASS	AB=1.000;AC=37;AF=0.685;AN=54;BaseQRankSum=6.071;DP=263;FS=57.871;HRun=1;HaplotypeScore=57.5012;InbreedingCoeff=0.7553;MQ=80.06;MQ0=1;MQRankSum=-7.790;QD=11.78;ReadPosRankSum=2.015;VQSLOD=-0.6090;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,0:7:10.21:73,10,0	1/1:1,0:1:2.99:24,3,0	0/0:20,1:17:5.68:0,6,264	0/0:26,0:20:35.94:0,36,399	1/1:3,0:3:5.99:48,6,0	1/1:24,0:24:61.55:400,62,0	1/1:14,0:14:38.56:256,39,0	0/0:26,0:26:18.10:0,18,474	1/1:0,3:3:3:26,3,0	1/1:2,0:2:4.17:20,4,0	./.	1/1:15,0:15:20.77:138,21,0	1/1:6,0:6:8.49:51,8,0	1/1:3,0:3:8.99:76,9,0	1/1:4,0:4:10.77:76,11,0	1/1:9,0:9:17.14:121,17,0	1/1:7,0:7:15.44:125,15,0	1/1:7,0:7:14.14:67,14,0	0/0:8,0:8:24.02:0,24,231	0/1:3,0:3:1.06:1,0,27	0/0:16,0:16:39.98:0,40,379	1/1:1,0:1:3:27,3,0	1/1:16,0:16:26.68:175,27,0	1/1:9,0:9:8.90:59,9,0	1/1:9,0:9:17.76:116,18,0	0/0:10,0:10:18.39:0,18,161	0/0:8,0:8:20.80:0,21,208	0/0:3,0:3:9.02:0,9,99
chr10	39558187	.	TAA	T	6695.93	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=12.470;DP=624;FS=29.873;HRun=2;HaplotypeScore=75.9709;InbreedingCoeff=0.9986;MQ=87.87;MQ0=3;MQRankSum=-1.749;QD=42.38;ReadPosRankSum=3.819;VQSLOD=3.3215;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:90.29:0,90,1790	0/0:8,0:8:24.05:0,24,438	0/0:18,0:18:51.17:0,51,992	0/0:27,0:27:77.96:0,78,1370	0/0:25,0:25:75.26:0,75,1515	1/1:0,29:29:78.27:1271,78,0	1/1:0,27:27:69.24:1124,69,0	0/0:31,0:31:90.31:0,90,1829	0/0:18,0:18:54.17:0,54,1060	0/0:16,0:16:42.14:0,42,842	0/0:13,0:13:39.13:0,39,792	1/1:0,28:28:81.28:1320,81,0	0/0:21,0:21:63.20:0,63,1243	0/0:16,0:16:48.16:0,48,972	0/0:38,0:38:99:0,114,2192	0/0:21,0:21:63.22:0,63,1280	0/0:28,0:28:81.25:0,81,1604	0/0:15,0:15:45.12:0,45,840	0/0:16,0:16:48.16:0,48,936	0/0:11,0:11:33.11:0,33,661	0/0:40,0:40:99:0,120,2438	0/0:12,0:12:33.11:0,33,670	1/1:0,22:22:63.22:1026,63,0	1/1:0,27:26:60.20:979,60,0	1/1:1,24:23:60.20:977,60,0	0/0:37,0:37:99:0,111,2132	0/0:18,0:16:54.16:0,54,1026	0/0:7,0:7:21.05:0,21,389
chr10	39559292	.	T	TA	4337.09	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=1.215;DP=558;FS=24.879;HRun=1;HaplotypeScore=134.4874;InbreedingCoeff=0.5603;MQ=55.77;MQ0=2;MQRankSum=-10.186;QD=17.63;ReadPosRankSum=1.348;VQSLOD=3.6626;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:13.19:0,13,156	0/0:9,0:9:12.95:0,13,75	0/0:12,0:12:23.20:0,23,157	0/0:15,0:15:23.52:0,24,235	1/1:0,26:25:60.07:726,60,0	0/1:18,0:18:7.25:7,0,30	0/0:18,0:18:30.13:0,30,169	0/0:30,0:30:81.93:0,82,428	1/1:1,12:13:36.03:440,36,0	0/1:34,0:34:10.39:10,0,218	0/1:11,0:11:9.76:10,0,65	0/0:20,0:20:2.96:0,3,96	0/0:21,0:21:8.38:0,8,89	0/0:22,0:22:5.06:0,5,109	1/1:1,30:31:69.91:859,70,0	1/1:3,22:25:66.30:839,66,0	1/1:2,26:28:66.98:825,67,0	0/0:11,0:11:16.73:0,17,83	0/0:16,0:16:33.71:0,34,194	0/0:20,0:20:15.66:0,16,144	0/0:17,0:17:25.42:0,25,146	1/1:0,20:20:51.04:611,51,0	0/1:14,0:14:7.36:7,0,20	0/0:17,0:17:5.94:0,6,86	0/0:17,0:17:10.90:0,11,108	0/0:23,0:23:20.57:0,21,200	0/1:25,0:25:1.74:2,0,106	0/0:11,0:11:19.66:0,20,74
chr10	39560220	.	C	CT	2341.32	PASS	AB=0.943;AC=17;AF=0.304;AN=56;BaseQRankSum=-3.206;DP=570;FS=1.472;HRun=10;HaplotypeScore=61.1948;InbreedingCoeff=0.5840;MQ=61.82;MQ0=0;MQRankSum=-1.757;QD=12.52;ReadPosRankSum=1.343;VQSLOD=3.3579;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:98.84:0,99,812	0/1:6,0:6:13.19:13,0,105	0/0:11,0:10:10.69:0,11,70	0/1:12,0:12:6.97:7,0,97	0/0:30,0:28:71.49:0,71,589	1/1:4,16:20:14.52:356,15,0	1/1:3,12:15:30.08:320,30,0	0/0:33,0:33:64.95:0,65,532	0/0:14,0:14:38.94:0,39,320	0/0:30,0:29:59.64:0,60,475	0/0:23,0:22:41.88:0,42,339	1/1:4,19:23:17.46:387,17,0	0/0:15,0:15:38.94:0,39,319	0/0:16,0:16:29.79:0,30,245	0/0:10,0:10:29.96:0,30,246	0/0:16,0:16:28.65:0,29,285	0/0:31,0:31:80.85:0,81,664	0/0:25,0:25:60.80:0,61,494	0/0:13,1:13:0.93:0,1,209	0/0:26,0:26:62.83:0,63,505	0/1:9,1:10:14:14,0,105	0/0:25,0:26:64.92:0,65,520	1/1:6,20:26:33.62:533,34,0	1/1:1,11:12:29.74:297,30,0	1/1:1,23:24:54.14:576,54,0	0/1:22,2:23:1.05:1,0,405	0/0:20,0:20:50.93:0,51,419	0/1:13,2:12:26.04:26,0,207
chr10	39560930	.	A	AG	6468.28	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-9.032;DP=801;FS=5.859;HRun=0;HaplotypeScore=77.6904;InbreedingCoeff=0.9824;MQ=86.67;MQ0=1;MQRankSum=-5.621;QD=42.00;ReadPosRankSum=0.694;VQSLOD=5.3910;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:57:99:0,163,2263	0/0:17,0:17:51.17:0,51,713	0/0:28,0:28:84.03:0,84,1109	0/0:26,0:26:49.03:0,49,847	0/0:30,0:30:90.30:0,90,1259	1/1:0,22:22:57.19:911,57,0	1/1:1,28:29:75.26:1198,75,0	0/0:41,0:41:99:0,120,1631	0/0:20,0:20:60.20:0,60,839	0/0:36,0:36:99:0,105,1468	0/0:24,0:24:69.22:0,69,945	1/1:1,29:30:75.26:1199,75,0	0/0:22,0:22:63.21:0,63,880	0/0:23,0:23:69.23:0,69,965	0/0:39,0:39:99:0,114,1594	0/0:27,0:27:78.26:0,78,1091	0/0:41,0:41:99:0,123,1713	0/0:29,0:29:87.29:0,87,1211	0/0:25,0:25:72.23:0,72,989	0/0:35,0:35:99:0,102,1390	0/0:51,0:50:99:0,147,2037	0/0:23,0:23:69.22:0,69,949	1/1:0,23:23:57.19:911,57,0	1/1:0,35:35:99:1631,102,0	1/1:0,15:15:39.13:619,39,0	0/0:19,1:20:12.21:0,12,750	0/0:30,0:30:90.28:0,90,1237	0/0:3,0:3:9.03:0,9,126
chr10	39561798	.	T	TC	4221.85	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=9.851;DP=581;FS=5.054;HRun=0;HaplotypeScore=68.2603;InbreedingCoeff=0.9994;MQ=84.54;MQ0=0;MQRankSum=-1.669;QD=40.21;ReadPosRankSum=-0.093;VQSLOD=5.2669;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,34:35:90.30:1358,90,0	1/1:0,8:8:24.08:365,24,0	0/0:20,0:21:47.90:0,48,723	0/0:19,0:19:51.77:0,52,717	0/0:19,0:19:57.19:0,57,796	0/0:30,0:30:84.28:0,84,1173	0/0:20,0:20:60.20:0,60,837	0/0:26,0:26:78.25:0,78,1077	0/0:17,0:17:51.17:0,51,713	1/1:0,23:23:69.23:1060,69,0	1/1:0,24:24:54.18:800,54,0	0/0:16,0:16:48.16:0,48,670	0/0:12,0:12:33.09:0,33,429	0/0:18,0:18:54.18:0,54,755	0/0:23,0:23:69.20:0,69,929	0/0:20,0:20:60.20:0,60,839	0/0:31,0:31:93.31:0,93,1298	1/1:0,15:15:42.14:639,42,0	0/0:20,0:20:60.17:0,60,804	0/0:29,0:29:84.25:0,84,1139	0/0:23,0:23:69.22:0,69,947	0/0:18,0:18:54.18:0,54,754	0/0:26,0:26:78.24:0,78,1072	0/0:16,0:16:48.14:0,48,652	0/0:18,0:18:54.18:0,54,754	0/0:29,0:29:87.28:0,87,1202	0/0:14,0:14:42.14:0,42,582	0/0:11,0:11:33.11:0,33,460
chr10	39561933	.	CTTG	C	3769.07	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=10.176;DP=582;FS=4.120;HRun=0;HaplotypeScore=87.4401;InbreedingCoeff=0.9849;MQ=86.22;MQ0=0;MQRankSum=-2.761;QD=35.22;ReadPosRankSum=2.912;VQSLOD=4.4549;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,111,2354	0/0:6,0:6:18.06:0,18,402	0/0:17,0:17:45.15:0,45,957	0/0:25,0:25:75.20:0,75,1483	0/0:21,0:21:51.18:0,51,1129	1/1:0,17:17:36.12:587,36,0	1/1:0,26:26:63.19:1028,63,0	0/0:33,0:33:87.30:0,87,1916	0/0:19,0:19:57.17:0,57,1228	0/0:19,0:19:54.18:0,54,1165	0/0:5,0:5:12.04:0,12,268	1/1:1,18:19:51.17:832,51,0	0/0:23,0:23:66.19:0,66,1387	0/0:14,0:14:42.12:0,42,851	0/0:29,0:29:84.23:0,84,1724	0/0:19,0:19:57.20:0,57,1251	0/0:40,0:40:99:0,114,2505	0/0:14,0:14:42.14:0,42,935	0/0:19,0:19:57.20:0,57,1242	0/0:13,0:13:30.07:0,30,584	0/0:56,0:56:99:0,160,3375	0/0:21,0:21:57.18:0,57,1175	1/1:2,6:8:12.04:196,12,0	1/1:1,23:24:36.12:588,36,0	1/1:1,12:13:33.11:538,33,0	0/0:17,0:17:48.16:0,48,1029	0/0:19,0:19:54.19:0,54,1180	0/0:7,0:7:21.07:0,21,469
chr10	39564412	.	AAGAGG	A	4708.19	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=8.548;DP=932;FS=5.396;HRun=0;HaplotypeScore=202.9080;InbreedingCoeff=0.9958;MQ=78.62;MQ0=3;MQRankSum=-5.365;QD=37.37;ReadPosRankSum=0.817;VQSLOD=4.3949;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,39:44:78.22:1469,78,0	1/1:1,8:9:15.05:291,15,0	0/0:50,0:44:90.07:0,90,2006	0/0:71,0:54:75.07:0,75,1939	0/0:22,0:22:54.17:0,54,1426	0/0:26,0:26:69.21:0,69,1872	0/0:30,0:30:75.24:0,75,2047	0/0:29,0:29:60.21:0,60,1511	0/0:36,0:36:78.27:0,78,2193	1/1:8,27:34:81.27:1517,81,0	1/1:2,21:23:54.14:1008,54,0	0/0:30,0:30:78.27:0,78,2174	0/0:33,0:33:87.30:0,87,2551	0/0:27,0:27:60.20:0,60,1614	0/0:57,0:57:99:0,138,3885	0/0:52,0:52:99:0,129,3608	0/0:38,0:38:99:0,99,2725	1/1:7,7:14:23.97:423,24,0	0/0:26,0:26:63.22:0,63,1613	0/0:26,0:26:66.23:0,66,1814	0/0:45,0:45:96.33:0,96,2723	0/0:25,0:25:66.23:0,66,1891	0/0:21,0:21:57.20:0,57,1586	0/0:38,0:38:99:0,99,2533	0/0:29,0:29:69.24:0,69,1977	0/0:32,0:32:66.23:0,66,1805	0/0:46,0:46:99:0,117,3322	0/0:16,0:16:33.11:0,33,967
chr10	39565462	.	TCTCTCTCACACACACACA	T	1564.83	PASS	AB=0.956;AC=15;AF=0.268;AN=56;BaseQRankSum=3.148;DP=547;FS=0.000;HRun=0;HaplotypeScore=193.3444;InbreedingCoeff=-0.0972;MQ=49.82;MQ0=7;MQRankSum=-1.205;QD=5.88;ReadPosRankSum=-0.616;VQSLOD=2.6204;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:47.79:0,48,2484	0/0:4,0:4:12.04:0,12,387	0/0:10,0:3:6.02:0,6,136	0/0:15,0:2:3.01:0,3,121	0/0:14,14:27:24.04:0,24,312	0/0:29,0:29:0.43:0,0,0	0/1:26,0:26:66.92:67,0,101	0/1:21,0:18:36.96:37,0,325	0/1:14,1:15:52.90:410,0,53	0/0:9,0:9:21.46:0,21,859	0/0:19,0:19:23.99:0,24,762	0/1:3,0:11:4.01:4,0,220	0/0:16,0:16:24.65:0,25,894	0/0:16,0:16:21.06:0,21,856	0/1:25,0:25:51.83:242,0,52	1/1:22,0:22:7.46:182,7,0	0/1:24,0:24:99:415,0,129	0/0:22,0:21:57.14:0,57,2804	0/1:16,0:16:46.51:47,0,573	0/1:23,0:22:99:109,0,231	0/0:18,0:17:22.26:0,22,331	0/1:27,0:27:53.79:54,0,379	1/1:17,0:17:3.01:34,3,0	0/0:22,0:22:2.48:0,2,74	0/0:30,0:29:6.02:0,6,294	0/1:15,0:15:61.70:62,0,448	0/1:24,0:24:55.44:55,0,490	0/0:15,0:14:19.75:0,20,585
chr10	39565466	.	TCTCACACA	T	3629.65	PASS	AB=0.784;AC=36;AF=0.643;AN=56;BaseQRankSum=-1.645;DP=528;FS=1.224;HRun=0;HaplotypeScore=135.8796;InbreedingCoeff=0.7254;MQ=49.37;MQ0=7;MQRankSum=-0.459;QD=9.38;ReadPosRankSum=-1.885;VQSLOD=2.1251;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:50.26:0,50,1078	0/0:4,0:4:11.90:0,12,156	0/0:4,0:1:2.99:0,3,23	0/0:6,0:1:3.01:0,3,72	1/1:27,0:26:7.89:141,8,0	0/1:7,22:29:0.21:0,0,0	1/1:24,0:24:11.44:84,11,0	1/1:20,0:17:20.96:187,21,0	1/1:16,0:16:21.09:235,21,0	0/0:10,0:10:18:0,18,368	0/0:18,0:18:7.80:0,8,259	1/1:11,0:11:12.48:166,12,0	0/0:16,0:16:21.66:0,22,289	0/1:16,0:16:4.24:4,0,248	1/1:7,0:25:11.93:192,12,0	1/1:4,0:23:8.20:179,8,0	1/1:22,0:22:21.91:259,22,0	0/0:22,0:21:50.16:0,50,1075	1/1:15,0:15:6.89:318,7,0	1/1:23,0:22:10.20:155,10,0	1/1:18,0:17:23.63:363,24,0	1/1:26,0:26:41.73:319,42,0	1/1:2,16:18:3.01:51,3,0	1/1:3,19:22:3.27:85,3,0	0/0:10,22:31:6.02:0,6,89	1/1:15,0:15:35.11:457,35,0	1/1:21,1:22:26.78:259,27,0	1/1:15,0:14:17.56:176,18,0
chr10	39565468	.	TCACACA	T	1791.72	PASS	AB=0.843;AC=28;AF=0.538;AN=52;BaseQRankSum=2.346;DP=532;FS=13.172;HRun=0;HaplotypeScore=134.7966;InbreedingCoeff=0.4206;MQ=49.56;MQ0=6;MQRankSum=-3.707;QD=5.38;ReadPosRankSum=-0.053;VQSLOD=2.0114;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:54.10:0,54,1010	0/0:4,0:4:3.01:0,3,75	0/0:6,0:1:2.99:0,3,23	0/0:5,0:1:3.01:0,3,72	./.	0/1:29,0:29:0:0,0,0	0/1:13,0:23:0.17:0,0,0	1/1:16,3:16:8.73:101,9,0	1/1:9,0:16:9.50:139,10,0	0/0:11,0:11:15.52:0,16,380	0/0:9,0:19:9.07:0,9,184	1/1:11,0:11:6.38:70,6,0	0/0:15,0:15:17.59:0,18,192	0/1:19,0:19:19.36:19,0,202	1/1:23,0:24:9.03:124,9,0	1/1:21,0:23:8.33:133,8,0	1/1:12,0:21:11.40:186,11,0	0/0:22,0:21:36.55:0,37,709	0/1:14,0:14:16.42:254,0,16	0/1:12,11:22:7.04:12,0,7	1/1:20,0:19:18.34:319,18,0	./.	1/1:18,0:18:3.01:51,3,0	1/1:21,0:22:3.01:52,3,0	0/0:31,0:31:0:0,0,0	1/1:8,8:16:20.82:362,21,0	1/1:10,0:20:8.78:83,9,0	0/1:8,7:14:27.46:51,0,27
chr10	39566655	.	TCC	T	964.84	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=-8.948;DP=494;FS=0.000;HRun=16;HaplotypeScore=128.0711;InbreedingCoeff=0.6294;MQ=59.68;MQ0=2;MQRankSum=5.591;QD=7.15;ReadPosRankSum=4.798;VQSLOD=0.4807;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:68.85:0,69,503	0/0:8,0:8:14.88:0,15,110	0/0:9,0:6:3.82:0,4,84	0/1:13,0:8:9.87:10,0,82	1/1:7,0:7:0.40:1,0,0	0/0:18,0:18:26.88:0,27,297	0/0:13,0:13:17.33:0,17,117	0/0:17,0:17:34.11:0,34,230	0/0:12,0:12:0.82:0,1,2	0/0:18,0:18:27.33:0,27,209	0/0:10,0:10:11.62:0,12,49	1/1:14,19:33:53.27:443,53,0	0/0:13,0:13:17.64:0,18,128	0/0:25,0:25:38.53:0,39,274	0/0:16,0:16:2.68:0,3,10	0/0:14,0:14:3.88:0,4,26	0/1:30,0:29:0.01:0,0,1	0/0:30,0:30:59.91:0,60,422	0/0:15,0:15:25.33:0,25,173	0/0:11,0:11:11.64:0,12,72	0/0:32,0:31:24.38:0,24,135	0/1:10,0:10:0:0,0,0	1/1:3,7:10:11.81:100,12,0	1/1:9,23:32:65.69:550,66,0	0/0:21,0:21:32.51:0,33,235	0/0:14,0:14:30.27:0,30,234	0/0:20,0:20:46.30:0,46,325	0/0:7,0:7:13.81:0,14,108
chr10	39566660	.	C	CTA	2411.26	PASS	AB=0.886;AC=19;AF=0.339;AN=56;BaseQRankSum=9.479;DP=497;FS=32.423;HRun=0;HaplotypeScore=136.7933;InbreedingCoeff=-0.2361;MQ=61.15;MQ0=2;MQRankSum=-9.166;QD=7.70;ReadPosRankSum=4.721;VQSLOD=1.6839;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:34,0:34:27.22:409,27,0	0/1:8,0:9:40.98:67,0,41	0/0:12,0:9:16.05:0,16,177	0/1:14,0:9:3.33:3,0,117	0/0:10,0:10:6.02:0,6,92	0/1:16,2:19:40.14:214,0,40	0/1:10,1:11:62.79:137,0,63	0/1:15,4:20:99:214,0,212	0/0:12,0:12:29.45:0,29,401	0/1:15,0:15:32.51:164,0,33	1/1:10,0:10:0.99:42,1,0	0/0:27,0:27:75.06:0,75,845	0/1:9,1:10:74.56:75,0,84	0/1:21,4:26:99:198,0,215	0/0:16,0:16:36.04:0,36,492	0/0:14,0:14:42.13:0,42,600	0/0:30,0:29:63.12:0,63,891	0/1:28,2:30:36:220,0,36	0/1:15,1:14:99:104,0,137	0/0:8,4:12:4.01:0,4,100	0/1:26,8:33:99:172,0,281	0/0:10,0:10:17.94:0,18,219	0/0:11,0:11:21:0,21,249	0/0:30,0:30:81.19:0,81,879	0/1:11,0:21:65.47:83,0,65	0/1:13,2:17:99:209,0,113	0/1:19,3:22:88.09:228,0,88	0/1:5,0:5:6.96:36,0,7
chr10	39566662	.	C	CTA	2743.69	PASS	AB=0.955;AC=25;AF=0.446;AN=56;BaseQRankSum=6.699;DP=493;FS=40.616;HRun=0;HaplotypeScore=134.8264;InbreedingCoeff=0.3224;MQ=62.70;MQ0=2;MQRankSum=-7.368;QD=8.88;ReadPosRankSum=6.740;VQSLOD=0.9569;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,21:35:27.41:630,27,0	0/1:3,4:7:4.42:113,0,4	0/0:13,0:10:22.47:0,22,193	0/0:16,0:11:17.09:0,17,191	0/0:10,0:10:6.02:0,6,91	1/1:18,0:18:22.82:105,23,0	1/1:10,0:10:13.47:51,13,0	0/1:23,0:23:26.76:80,0,27	0/0:11,0:11:30.10:0,30,432	1/1:4,9:14:38.53:414,39,0	1/1:1,9:10:6.16:79,6,0	0/0:27,0:27:64.62:0,65,600	0/1:10,0:10:29.43:29,0,36	0/1:25,1:26:21.02:75,0,21	0/0:14,0:14:36.58:0,37,503	0/0:14,0:14:42.14:0,42,608	0/0:29,0:28:63.20:0,63,922	1/1:11,18:29:65.37:980,65,0	0/1:18,0:16:31.43:57,0,31	0/1:12,0:12:9.43:10,0,9	0/1:32,0:31:37.45:92,0,37	0/0:11,0:11:17.99:0,18,233	0/0:11,0:11:15.41:0,15,147	0/0:28,0:28:74.84:0,75,635	1/1:19,0:19:0.90:31,1,0	0/1:18,0:18:55.26:55,0,62	0/1:23,0:23:6.19:93,0,6	1/1:5,0:5:11.98:42,12,0
chr10	39566663	.	C	CTA	3103.76	PASS	AB=0.820;AC=21;AF=0.375;AN=56;BaseQRankSum=-0.876;DP=490;FS=47.036;HRun=0;HaplotypeScore=131.1786;InbreedingCoeff=0.3473;MQ=62.86;MQ0=2;MQRankSum=-6.988;QD=11.85;ReadPosRankSum=3.121;VQSLOD=1.1986;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:41.82:0,42,211	0/0:7,0:7:14.09:0,14,74	0/0:13,0:10:23.14:0,23,206	0/0:16,0:11:12.37:0,12,165	0/0:10,0:10:6.02:0,6,90	1/1:4,14:18:18.70:327,19,0	0/1:6,4:10:2.78:158,0,3	0/1:17,6:23:5.17:397,0,5	0/0:12,0:12:30.06:0,30,383	0/1:13,0:13:13.72:19,0,14	0/1:10,0:10:8.18:8,0,40	0/0:27,0:27:74.88:0,75,722	0/1:4,5:9:22.76:150,0,23	1/1:15,10:25:10.35:407,10,0	0/0:13,0:13:33.11:0,33,481	0/0:14,0:14:42.12:0,42,567	0/0:31,0:30:63.21:0,63,936	0/1:28,0:28:42.11:42,0,72	0/1:12,5:15:13.99:296,0,14	1/1:10,3:13:10.22:158,10,0	1/1:20,11:30:15.19:262,15,0	0/0:11,0:11:20.95:0,21,265	0/0:12,0:12:17.88:0,18,174	0/0:27,0:27:75.06:0,75,723	1/1:9,9:18:17.71:219,18,0	0/1:11,6:17:60.63:242,0,61	0/1:15,9:25:9.39:434,0,9	1/1:1,4:5:15.04:174,15,0
chr10	39566667	.	C	CCCA	6158.98	PASS	AB=0.822;AC=33;AF=0.589;AN=56;BaseQRankSum=-1.466;DP=488;FS=2.571;HRun=0;HaplotypeScore=137.9297;InbreedingCoeff=0.7320;MQ=62.96;MQ0=2;MQRankSum=-6.459;QD=19.43;ReadPosRankSum=2.326;VQSLOD=5.0001;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,2:33:85.33:852,85,0	1/1:5,0:8:17.89:157,18,0	0/0:13,0:10:9.97:0,10,141	0/1:16,0:11:5.27:5,0,80	0/0:11,0:11:3:0,3,26	1/1:6,14:20:34.73:552,35,0	1/1:5,4:9:17:215,17,0	1/1:13,6:19:15.47:467,15,0	0/0:13,0:13:15.88:0,16,129	1/1:8,0:14:34.25:380,34,0	1/1:2,0:9:11.54:82,12,0	0/0:25,0:25:65.03:0,65,531	1/1:4,5:9:20.56:267,21,0	1/1:17,9:27:17.51:470,18,0	0/0:12,0:12:11.74:0,12,105	0/0:10,0:10:5.97:0,6,47	0/0:34,0:33:23.98:0,24,209	1/1:11,0:29:70.20:655,70,0	1/1:13,5:16:13.05:362,13,0	0/1:13,3:16:2.37:77,0,2	1/1:22,8:29:13.85:168,14,0	0/0:11,0:11:12:0,12,104	0/0:13,0:13:23.63:0,24,182	0/0:29,0:29:77.57:0,78,673	0/1:6,9:15:8.71:236,0,9	1/1:11,6:17:6.89:414,7,0	1/1:12,8:22:40.57:620,41,0	1/1:2,4:6:8.35:181,8,0
chr10	39566774	.	T	TA	8652.02	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-11.007;DP=562;FS=1.945;HRun=8;HaplotypeScore=56.8668;InbreedingCoeff=0.9985;MQ=71.53;MQ0=0;MQRankSum=-2.993;QD=27.82;ReadPosRankSum=2.037;VQSLOD=5.4164;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,25:28:66.20:760,66,0	1/1:0,9:9:24.07:277,24,0	0/0:15,0:11:20.89:0,21,172	0/0:17,0:16:26.73:0,27,231	0/0:21,0:21:53.73:0,54,466	1/1:2,13:15:36.11:415,36,0	1/1:2,12:14:36.11:414,36,0	1/1:5,18:24:56.96:605,57,0	0/0:13,0:13:33.01:0,33,299	1/1:4,22:26:66.17:742,66,0	1/1:3,22:25:64:708,64,0	0/0:24,0:24:66.01:0,66,595	1/1:0,14:14:33.10:381,33,0	1/1:0,15:15:45.13:518,45,0	0/0:28,0:28:69.01:0,69,627	0/0:14,0:14:39.02:0,39,357	0/0:36,0:36:96:0,96,866	1/1:5,14:19:36.11:415,36,0	1/1:2,18:20:48.13:545,48,0	1/1:0,20:20:54.16:623,54,0	1/1:2,17:19:39.12:450,39,0	0/0:23,0:23:63.02:0,63,576	0/0:32,0:32:87.02:0,87,788	0/0:28,0:28:66:0,66,601	1/1:0,16:16:45.13:519,45,0	1/1:2,14:15:42.12:485,42,0	1/1:2,15:17:45.13:519,45,0	1/1:1,13:14:24.07:276,24,0
chr10	39568189	.	T	TA	11609	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=11.169;DP=640;FS=8.464;HRun=6;HaplotypeScore=91.2521;InbreedingCoeff=0.9874;MQ=65.71;MQ0=0;MQRankSum=-0.256;QD=31.81;ReadPosRankSum=-1.029;VQSLOD=4.1211;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,28:30:75.24:943,75,0	1/1:0,17:17:42.13:528,42,0	0/0:10,0:8:17.90:0,18,156	0/0:6,0:5:7.57:0,8,65	0/0:35,0:35:96.20:0,96,973	1/1:1,28:29:75.24:943,75,0	1/1:2,16:18:45.14:566,45,0	1/1:6,30:36:90.24:1091,90,0	0/0:29,0:29:75.16:0,75,765	1/1:3,22:25:63.20:791,63,0	1/1:1,26:27:78.24:964,78,0	0/0:26,0:26:72.16:0,72,735	0/0:32,0:32:87.16:0,87,873	0/0:18,0:18:51.11:0,51,520	0/0:17,0:17:39.07:0,39,391	0/0:22,0:22:54.05:0,54,550	0/0:22,0:22:60.13:0,60,612	1/1:3,20:23:26.79:649,27,0	1/1:4,27:30:81.25:1008,81,0	1/1:2,31:33:87.28:1084,87,0	1/1:1,8:9:21.07:264,21,0	0/0:24,0:24:66.15:0,66,673	0/0:19,0:19:57.13:0,57,581	0/0:15,0:15:45.10:0,45,459	1/1:1,17:18:51.16:641,51,0	1/1:3,24:28:75.21:928,75,0	1/1:3,22:25:51.16:642,51,0	1/1:0,16:16:45.14:566,45,0
chr10	39569295	.	TTG	T	1360.65	PASS	AB=0.828;AC=39;AF=0.848;AN=46;BaseQRankSum=-2.557;DP=517;FS=8.984;HRun=0;HaplotypeScore=107.5298;InbreedingCoeff=0.3402;MQ=61.20;MQ0=10;MQRankSum=1.025;QD=3.70;ReadPosRankSum=0.829;VQSLOD=1.9423;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:19,4:24:6.11:124,0,6	1/1:6,2:8:8.69:76,9,0	./.	./.	1/1:16,2:19:6.02:65,6,0	1/1:17,0:20:8.48:41,8,0	./.	./.	1/1:11,3:14:3.01:32,3,0	1/1:18,2:20:3:32,3,0	1/1:16,2:18:8.77:63,9,0	0/0:12,0:12:2.99:0,3,24	1/1:11,6:17:14.62:161,15,0	1/1:6,3:9:9.02:97,9,0	1/1:10,6:17:17.88:176,18,0	1/1:16,4:20:5.90:65,6,0	1/1:25,10:35:1.07:203,1,0	1/1:11,3:14:9.02:97,9,0	1/1:13,0:15:2.84:14,3,0	1/1:22,0:26:5.84:39,6,0	./.	1/1:14,2:16:6.01:65,6,0	0/0:23,0:21:5.17:0,5,17	0/0:23,0:23:8.98:0,9,73	1/1:14,0:18:8.52:42,9,0	1/1:15,0:17:6.19:29,6,0	1/1:20,0:23:10.55:47,11,0	1/1:14,0:15:2.84:14,3,0
chr10	39569307	.	G	GTGTGTT	507.71	PASS	AB=0.563;AC=5;AF=0.089;AN=56;BaseQRankSum=-1.165;DP=532;FS=6.264;HRun=0;HaplotypeScore=151.0749;InbreedingCoeff=0.5660;MQ=55.76;MQ0=13;MQRankSum=-2.629;QD=7.36;ReadPosRankSum=-0.543;VQSLOD=2.0287;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:41.89:0,42,434	0/0:8,0:8:18.01:0,18,199	0/0:21,0:7:14.91:0,15,114	0/0:23,0:10:2.18:0,2,61	0/0:18,0:18:23.88:0,24,223	0/0:17,0:17:23.07:0,23,222	0/0:5,0:5:5.97:0,6,50	0/0:23,0:21:53.54:0,54,397	0/0:12,0:12:25.80:0,26,222	0/0:21,0:21:49.83:0,50,420	0/0:23,0:22:54.75:0,55,477	1/1:13,0:13:3.01:47,3,0	0/0:18,0:18:32.46:0,32,362	0/0:9,0:9:20.67:0,21,227	0/0:22,0:22:48.25:0,48,534	0/0:20,0:20:48.09:0,48,426	0/0:36,0:35:85.82:0,86,830	0/0:14,0:14:38.77:0,39,376	0/0:14,0:14:32.94:0,33,292	0/0:25,0:24:56.72:0,57,482	0/0:14,0:14:8.65:0,9,65	0/0:19,0:19:35.97:0,36,344	0/1:6,17:25:8.13:301,0,8	1/1:5,24:29:7.40:269,7,0	0/0:17,0:17:35.75:0,36,362	0/0:19,0:19:38.66:0,39,335	0/0:23,0:22:56.47:0,56,512	0/0:12,0:12:32.92:0,33,277
chr10	39569309	.	G	GTGTT	362.29	PASS	AB=0.982;AC=4;AF=0.071;AN=56;BaseQRankSum=0.920;DP=529;FS=11.544;HRun=0;HaplotypeScore=131.6672;InbreedingCoeff=0.3815;MQ=52.29;MQ0=15;MQRankSum=-1.229;QD=5.41;ReadPosRankSum=0.495;VQSLOD=1.9659;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:41.93:0,42,382	0/0:7,0:7:18.01:0,18,173	0/0:22,0:6:14.91:0,15,115	0/0:21,0:8:2.15:0,2,43	0/0:18,0:18:24.35:0,24,205	0/0:17,0:17:29.48:0,29,247	0/0:5,0:5:5.96:0,6,50	0/0:22,0:20:53.56:0,54,398	0/0:12,0:12:26.66:0,27,221	0/0:18,0:18:49.83:0,50,408	0/0:23,0:22:56.83:0,57,478	1/1:0,14:15:2.85:81,3,0	0/0:18,0:18:35.37:0,35,325	0/0:11,0:11:24.15:0,24,216	0/0:22,0:22:50.70:0,51,483	0/0:22,0:22:47.61:0,48,401	0/0:36,0:35:85.68:0,86,738	0/0:14,0:14:38.10:0,38,336	0/0:13,0:13:32.95:0,33,282	0/0:25,0:24:59.71:0,60,494	0/0:14,0:14:15.23:0,15,121	0/0:19,0:19:35.97:0,36,319	0/1:25,0:23:7.22:156,0,7	0/1:26,1:27:6.10:228,0,6	0/0:17,0:17:38.76:0,39,347	0/0:20,0:20:50.80:0,51,421	0/0:22,0:21:56.42:0,56,444	0/0:13,0:13:35.82:0,36,278
chr10	39569409	.	GAACCAA	G	12021.72	PASS	AC=32;AF=0.593;AN=54;BaseQRankSum=14.325;DP=493;FS=5.086;HRun=0;HaplotypeScore=117.6226;InbreedingCoeff=0.9824;MQ=83.74;MQ0=0;MQRankSum=-15.484;QD=45.54;ReadPosRankSum=0.837;VQSLOD=4.3238;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,29:34:60.16:1240,60,0	1/1:1,5:6:15.05:328,15,0	0/0:26,0:26:57.32:0,57,1819	0/0:26,0:25:57.17:0,57,1684	0/0:22,0:22:51.18:0,51,1721	1/1:1,23:24:57.19:1247,57,0	1/1:5,17:22:33.11:745,33,0	1/1:4,13:17:33.10:686,33,0	0/0:13,0:13:39.13:0,39,1351	1/1:1,10:11:30.10:667,30,0	1/1:3,7:10:12.04:271,12,0	0/0:23,0:23:69.21:0,69,2182	1/1:4,20:24:54.18:1220,54,0	1/1:2,11:13:27.09:611,27,0	0/0:22,0:22:60.21:0,60,2061	0/0:19,0:19:57.20:0,57,1975	0/0:26,0:26:75.23:0,75,2502	1/1:1,4:5:9.03:204,9,0	1/1:2,10:12:27.06:520,27,0	1/1:3,11:14:33.11:736,33,0	1/1:4,10:13:18.06:379,18,0	0/0:16,0:16:42.13:0,42,1374	0/0:16,0:16:45.14:0,45,1480	0/0:19,0:19:51.18:0,51,1766	1/1:2,9:11:21.07:419,21,0	1/1:0,23:23:69.24:1538,69,0	1/1:2,22:24:54.18:1211,54,0	./.
chr10	39569702	.	G	GTT	3118.46	PASS	AB=0.850;AC=31;AF=0.554;AN=56;BaseQRankSum=7.094;DP=643;FS=11.755;HRun=12;HaplotypeScore=110.8865;InbreedingCoeff=0.5368;MQ=67.57;MQ0=5;MQRankSum=-4.576;QD=8.06;ReadPosRankSum=-4.568;VQSLOD=-0.7608;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:17,22:42:35.42:747,35,0	0/1:2,4:7:15.77:78,0,16	0/0:15,0:13:15.89:0,16,160	0/0:22,0:21:26.78:0,27,220	0/0:25,0:28:49.97:0,50,471	1/1:13,0:13:12.98:103,13,0	1/1:12,0:26:27.01:259,27,0	0/1:41,0:36:28.40:180,0,28	0/0:24,0:22:15.13:0,15,272	1/1:3,10:14:35.02:396,35,0	1/1:2,7:10:20.89:201,21,0	0/0:24,0:24:48.25:0,48,410	1/1:6,0:23:36.19:153,36,0	1/1:12,0:26:13.32:135,13,0	0/0:32,0:33:85.49:0,85,736	0/1:35,1:36:10.29:10,0,558	0/0:28,0:30:70.40:0,70,659	1/1:9,5:16:5.79:268,6,0	0/1:22,0:19:11.88:103,0,12	1/1:16,0:15:2.89:29,3,0	0/1:5,0:9:17.30:50,0,17	0/0:14,0:14:4.63:0,5,180	0/0:21,0:23:42.78:0,43,421	0/0:38,0:40:86.48:0,86,831	1/1:13,0:12:3:30,3,0	1/1:36,0:36:49.27:376,49,0	1/1:24,0:25:18.91:175,19,0	1/1:8,0:8:3:29,3,0
chr10	39570135	.	A	AACACACAC	5703.99	PASS	AB=0.866;AC=34;AF=0.680;AN=50;BaseQRankSum=-0.187;DP=532;FS=2.320;HRun=0;HaplotypeScore=166.7661;InbreedingCoeff=0.4949;MQ=65.29;MQ0=8;MQRankSum=-5.341;QD=15.42;ReadPosRankSum=-5.379;VQSLOD=2.4000;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:42,0:42:18.46:458,18,0	1/1:8,0:8:9.03:283,9,0	./.	./.	0/0:8,0:23:23.33:0,23,168	1/1:29,0:30:17.91:408,18,0	0/1:23,0:23:17.31:107,0,17	1/1:20,0:19:15.02:357,15,0	0/0:9,0:17:18.07:0,18,213	1/1:22,0:27:40.69:1097,41,0	./.	1/1:21,0:20:9:104,9,0	0/0:9,0:16:20.72:0,21,390	0/0:9,0:14:6.02:0,6,112	0/1:15,0:28:6.91:7,0,417	0/0:9,0:24:30.73:0,31,171	0/1:25,0:31:36.22:36,0,289	0/1:16,0:16:30.50:425,0,30	1/1:13,0:13:9.03:290,9,0	1/1:16,0:16:6.02:154,6,0	1/1:13,0:13:6:141,6,0	0/0:2,0:6:8.71:0,9,47	1/1:7,0:7:6.01:138,6,0	1/1:20,0:25:9.03:269,9,0	1/1:11,1:13:3.01:104,3,0	1/1:19,0:19:21.07:639,21,0	1/1:9,0:10:12.04:338,12,0	1/1:5,0:4:12.04:348,12,0
chr10	39570694	.	T	TTTGTTGTTGTTG	5235.46	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=-2.647;DP=697;FS=0.000;HRun=0;HaplotypeScore=223.5057;InbreedingCoeff=0.8601;MQ=68.80;MQ0=2;MQRankSum=-7.331;QD=42.56;ReadPosRankSum=-1.617;VQSLOD=4.1932;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:19,10:29:15.05:756,15,0	1/1:3,4:8:15.05:747,15,0	0/0:27,0:23:23.33:0,23,427	0/0:31,0:30:11.03:0,11,617	0/0:20,0:20:40.45:0,40,1320	0/0:25,0:25:48.16:0,48,1588	0/0:19,0:19:48.15:0,48,1428	0/0:38,0:38:39.13:0,39,1079	0/0:28,0:29:54.14:0,54,1545	1/1:18,11:29:42.14:1615,42,0	1/1:13,15:28:33.11:1582,33,0	0/0:34,0:34:69.21:0,69,2153	0/0:30,0:30:78.25:0,78,2630	0/0:18,0:18:42.14:0,42,1325	0/0:26,0:26:60.21:0,60,2014	0/0:25,0:25:51.17:0,51,1670	0/0:23,0:23:51.10:0,51,1492	1/1:11,3:14:9.03:519,9,0	0/0:22,0:22:30.10:0,30,953	0/0:24,0:24:39.13:0,39,1193	0/0:31,0:31:69.19:0,69,2202	0/0:14,0:14:39.13:0,39,1273	0/0:21,0:21:45.15:0,45,1508	0/0:31,0:32:66.15:0,66,2024	0/0:25,0:26:54.17:0,54,1587	0/1:15,0:15:15.83:16,0,637	0/0:37,0:37:72.24:0,72,2124	0/0:20,0:20:57.20:0,57,1896
chr10	39572645	.	T	TC	2303.78	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=11.365;DP=727;FS=1.692;HRun=0;HaplotypeScore=117.8037;InbreedingCoeff=0.9873;MQ=80.28;MQ0=0;MQRankSum=-0.120;QD=37.77;ReadPosRankSum=1.509;VQSLOD=3.3164;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,153,2087	0/0:6,0:6:18.06:0,18,252	0/0:22,0:22:54.16:0,54,706	0/0:15,1:16:26.86:0,27,412	0/0:30,0:30:90.29:0,90,1243	0/0:19,0:19:57.17:0,57,765	0/0:28,0:28:84.17:0,84,1127	0/0:24,0:24:72.23:0,72,992	0/0:26,0:26:78.26:0,78,1088	0/0:38,0:38:99:0,114,1594	0/0:20,0:20:57.18:0,57,782	0/0:30,0:30:87.29:0,87,1208	1/1:1,26:27:78.26:1145,78,0	1/1:1,33:34:87.29:1280,87,0	0/0:37,0:37:99:0,111,1535	0/0:17,0:17:51.16:0,51,696	0/0:33,0:33:99:0,99,1369	0/0:23,0:23:69.23:0,69,965	0/0:18,0:18:51.17:0,51,713	0/0:28,0:28:75.21:0,75,1027	0/0:39,0:39:99:0,117,1604	0/0:25,0:25:75.24:0,75,1026	0/0:28,0:28:81.27:0,81,1132	0/0:27,0:27:81.21:0,81,1077	0/0:16,0:16:45.14:0,45,615	0/0:31,0:31:87.28:0,87,1202	0/0:28,0:28:84.26:0,84,1141	0/0:6,0:6:15.05:0,15,210
chr10	39573329	.	A	ATG	8179.10	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=2.151;DP=731;FS=5.040;HRun=0;HaplotypeScore=172.7305;InbreedingCoeff=0.9709;MQ=64.66;MQ0=10;MQRankSum=0.088;QD=17.90;ReadPosRankSum=-0.342;VQSLOD=4.6606;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:31,0:31:30.01:372,30,0	1/1:7,0:7:8.42:83,8,0	0/0:39,0:25:44.97:0,45,414	0/0:46,0:26:19.47:0,19,252	0/0:32,0:32:83.54:0,84,815	1/1:22,0:22:50.92:543,51,0	1/1:22,2:23:39.25:584,39,0	1/1:48,0:48:57.95:834,58,0	1/1:23,0:23:33.80:547,34,0	1/1:28,1:28:42.42:408,42,0	1/1:24,2:26:31.73:463,32,0	0/0:16,0:16:20.36:0,20,159	1/1:15,0:25:50.32:410,50,0	1/1:11,0:21:29.41:252,29,0	0/0:27,0:26:65.99:0,66,722	0/0:31,0:31:75.09:0,75,788	0/0:22,0:22:51:0,51,548	1/1:18,0:18:23.51:293,24,0	1/1:7,13:20:39.02:462,39,0	1/1:21,7:28:53.38:725,53,0	1/1:30,2:30:62.96:630,63,0	0/0:17,0:17:45.08:0,45,506	0/0:22,0:22:20.74:0,21,167	0/0:22,0:22:11.92:0,12,97	1/1:8,23:31:14.97:237,15,0	1/1:12,27:40:92.77:1007,93,0	1/1:4,11:16:11.71:128,12,0	1/1:0,15:15:12.04:201,12,0
chr10	39573338	.	TGAGAGA	T	164.27	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=1.513;DP=689;FS=0.000;HRun=0;HaplotypeScore=225.5073;InbreedingCoeff=0.6449;MQ=58.59;MQ0=10;MQRankSum=-4.442;QD=2.13;ReadPosRankSum=-2.137;VQSLOD=2.0763;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:23.39:0,23,238	0/0:6,0:6:8.17:0,8,78	0/0:31,0:17:8.55:0,9,58	0/0:45,0:25:5.30:0,5,71	0/0:30,0:36:76.90:0,77,1603	0/0:23,0:23:28.74:0,29,379	0/0:23,0:23:35.08:0,35,620	0/0:43,0:43:39.85:0,40,474	0/0:23,0:23:48.02:0,48,816	0/0:28,0:27:35.84:0,36,320	0/0:24,0:24:32.38:0,32,255	1/1:5,11:16:9.03:175,9,0	0/0:25,0:25:32.97:0,33,370	0/0:18,0:18:18.37:0,18,175	0/0:26,0:25:38.31:0,38,937	0/0:29,0:31:53.25:0,53,1248	0/0:20,0:20:40.60:0,41,1038	0/1:19,0:19:21.21:21,0,182	0/0:16,0:16:29.78:0,30,437	0/0:24,0:25:55.57:0,56,768	0/0:26,0:25:28.91:0,29,440	0/0:17,0:18:36.57:0,37,879	1/1:8,14:22:2.96:20,3,0	1/1:6,13:20:8.36:74,8,0	0/0:26,0:26:15.04:0,15,291	0/0:37,0:37:53.04:0,53,858	0/0:16,0:15:12.89:0,13,196	0/0:16,0:16:15.03:0,15,278
chr10	39573356	.	A	AGC	485.30	PASS	AB=0.895;AC=5;AF=0.089;AN=56;BaseQRankSum=6.861;DP=587;FS=3.268;HRun=0;HaplotypeScore=170.2691;InbreedingCoeff=0.2890;MQ=50.51;MQ0=17;MQRankSum=-4.938;QD=5.51;ReadPosRankSum=1.730;VQSLOD=3.2087;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:21:1.58:0,2,46	0/0:7,0:7:9.05:0,9,62	0/0:15,0:7:14.15:0,14,174	0/1:28,0:12:1.25:1,0,85	0/0:33,0:33:81.44:0,81,973	0/0:22,0:22:20.30:0,20,147	0/0:22,0:21:21.25:0,21,194	0/0:30,0:29:64.61:0,65,500	0/0:27,0:27:31.54:0,32,321	0/0:21,0:20:40.63:0,41,457	0/0:22,0:22:13.11:0,13,151	0/0:14,0:14:11.83:0,12,79	0/1:14,11:26:28.48:376,0,28	1/1:10,7:17:9.67:204,10,0	0/0:22,0:21:53.96:0,54,684	0/0:26,0:25:63.07:0,63,771	0/0:20,0:19:48.01:0,48,632	0/0:17,0:17:33.26:0,33,326	0/0:17,0:17:37.27:0,37,254	0/0:22,0:23:21.42:0,21,199	0/0:20,0:18:17.06:0,17,111	0/0:16,0:16:42.05:0,42,539	0/0:21,0:21:8.95:0,9,69	0/0:22,0:21:8.96:0,9,76	0/1:17,0:17:6.08:6,0,6	0/0:30,0:28:55.68:0,56,459	0/0:16,0:14:11.16:0,11,67	0/0:14,0:12:2:0,2,33
chr10	39573367	.	AAG	A	2324.59	PASS	AB=0.939;AC=30;AF=0.577;AN=52;BaseQRankSum=2.561;DP=522;FS=3.001;HRun=0;HaplotypeScore=155.8799;InbreedingCoeff=0.5111;MQ=47.62;MQ0=17;MQRankSum=-1.415;QD=6.90;ReadPosRankSum=-0.585;VQSLOD=3.3331;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:17,5:21:18.94:122,19,0	1/1:4,1:5:5.37:36,5,0	./.	./.	0/0:31,0:31:48.70:0,49,614	1/1:13,4:17:5.73:84,6,0	1/1:19,2:20:25.38:190,25,0	1/1:14,14:27:42.02:459,42,0	1/1:19,6:24:35.77:311,36,0	1/1:16,3:18:2.96:145,3,0	1/1:18,2:20:12.03:84,12,0	0/1:17,0:17:6.11:6,0,108	0/0:24,0:24:37.86:0,38,254	0/0:18,0:18:23.71:0,24,124	0/0:19,0:19:32.97:0,33,433	0/0:27,0:25:54.03:0,54,708	0/0:21,0:19:33.09:0,33,489	1/1:14,1:15:13.52:209,14,0	0/1:16,1:16:8.23:109,0,8	1/1:19,0:19:16.25:182,16,0	0/1:18,0:16:2.23:73,0,2	0/0:16,0:16:35.40:0,35,478	0/0:19,0:19:2.85:0,3,35	0/1:23,0:22:7.82:8,0,41	1/1:14,0:14:14.12:82,14,0	0/1:22,6:26:3.38:285,0,3	0/1:11,2:12:32.94:33,0,46	1/1:14,2:13:10.47:91,10,0
chr10	39573386	.	GGAGAGAGA	G	757.76	PASS	AB=0.980;AC=11;AF=0.212;AN=52;BaseQRankSum=4.960;DP=485;FS=26.189;HRun=0;HaplotypeScore=179.5165;InbreedingCoeff=0.3387;MQ=41.67;MQ0=22;MQRankSum=-2.382;QD=5.09;ReadPosRankSum=1.770;VQSLOD=0.9933;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:6.44:0,6,71	0/0:6,0:6:5.09:0,5,71	./.	./.	0/0:22,0:22:2.32:0,2,44	1/1:13,1:14:3:51,3,0	0/0:19,0:18:16.40:0,16,124	0/0:26,0:25:24.35:0,24,250	0/1:21,0:20:0.56:1,0,55	0/0:17,0:16:15.95:0,16,217	0/0:15,0:15:2.87:0,3,50	0/0:28,0:28:20.90:0,21,191	1/1:19,3:22:17.98:394,18,0	1/1:7,10:17:15.05:337,15,0	0/0:18,0:17:9.03:0,9,207	0/0:25,0:23:18.05:0,18,283	0/0:25,0:24:23.99:0,24,437	0/0:14,0:14:9.03:0,9,151	0/0:14,0:13:7.50:0,8,21	0/1:17,0:17:0.02:0,0,0	0/1:15,0:13:7.23:48,0,7	0/0:18,0:17:6.01:0,6,75	0/0:17,0:17:5.25:0,5,50	0/0:20,0:18:11.51:0,12,234	0/0:12,0:12:0:0,0,0	0/1:28,0:27:47.26:47,0,188	0/1:13,0:12:16.70:17,0,30	0/0:16,0:10:8.75:0,9,122
chr10	39574080	.	G	GTTCCACCAGGGCT	38136.10	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=-6.009;DP=719;FS=3.635;HRun=0;HaplotypeScore=227.2627;InbreedingCoeff=0.9899;MQ=77.24;MQ0=0;MQRankSum=-17.391;QD=90.37;ReadPosRankSum=-3.448;VQSLOD=3.9358;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:23,13:47:72.25:3340,72,0	1/1:2,5:11:17.92:899,18,0	0/0:22,0:22:54.14:0,54,1568	0/0:21,0:21:42.14:0,42,1359	0/0:29,0:29:75.23:0,75,2525	1/1:4,11:26:45.15:2527,45,0	1/1:8,8:22:36.12:1603,36,0	1/1:47,0:47:99:5736,120,0	1/1:11,14:33:60.21:3205,60,0	1/1:7,11:33:84.17:3779,84,0	1/1:8,9:27:51.13:1576,51,0	0/0:20,0:20:54.17:0,54,1949	0/0:34,0:34:90.24:0,90,3048	0/0:19,0:19:48.15:0,48,1741	0/0:36,0:36:99:0,99,3591	0/0:19,0:19:51.18:0,51,1939	0/0:30,0:30:78.20:0,78,2527	1/1:3,6:17:21.07:1277,21,0	1/1:8,6:22:60.15:1951,60,0	1/1:10,14:34:72.20:3281,72,0	1/1:10,3:21:23.77:577,24,0	0/0:24,0:24:60.17:0,60,2011	0/0:20,0:20:56.94:0,57,1936	0/0:23,0:23:63.22:0,63,2275	1/1:8,15:28:54.13:2709,54,0	1/1:9,7:19:51.17:2492,51,0	1/1:5,12:27:45.15:2680,45,0	1/1:1,6:7:9.03:505,9,0
chr10	39574634	.	G	GACA	1094.29	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.669;DP=580;FS=0.909;HRun=0;HaplotypeScore=82.2541;InbreedingCoeff=0.9893;MQ=80.58;MQ0=0;MQRankSum=-6.356;QD=57.59;ReadPosRankSum=0.251;VQSLOD=5.4292;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:93.32:0,93,1721	0/0:8,0:8:24.08:0,24,446	0/0:12,0:12:30.10:0,30,541	0/0:19,0:19:52.99:0,53,925	0/0:32,0:32:96.33:0,96,1757	0/0:35,0:35:99:0,102,1838	0/0:14,0:14:42.13:0,42,732	0/0:30,0:30:84.29:0,84,1566	0/0:14,0:14:42.14:0,42,783	0/0:35,0:35:99:0,105,1911	0/0:26,0:26:78.27:0,78,1436	0/0:19,0:19:54.19:0,54,1007	1/1:1,10:11:33.11:715,33,0	1/1:1,7:8:24.08:500,24,0	0/0:19,0:19:57.18:0,57,1020	0/0:22,0:22:66.21:0,66,1200	0/0:20,0:20:60.21:0,60,1119	0/0:16,0:16:48.10:0,48,857	0/0:16,0:16:48.15:0,48,836	0/0:30,0:30:90.31:0,90,1647	0/0:14,0:14:42.13:0,42,751	0/0:15,0:15:42.14:0,42,783	0/0:20,0:20:60.21:0,60,1102	0/0:15,0:15:45.11:0,45,803	0/0:18,0:18:54.19:0,54,995	0/0:40,0:40:99:0,120,2226	0/0:36,0:36:99:0,108,2013	0/0:5,0:5:15.05:0,15,280
chr10	39574635	.	G	GCT	554.23	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.899;DP=580;FS=0.836;HRun=0;HaplotypeScore=72.3001;InbreedingCoeff=0.9895;MQ=80.56;MQ0=0;MQRankSum=-5.835;QD=27.71;ReadPosRankSum=-0.599;VQSLOD=4.5898;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:93.30:0,93,1478	0/0:8,0:8:24.08:0,24,388	0/0:12,0:12:33.11:0,33,520	0/0:19,0:19:43.80:0,44,804	0/0:32,0:32:96.31:0,96,1540	0/0:34,0:34:99:0,102,1608	0/0:14,0:14:42.13:0,42,654	0/0:31,0:31:87.28:0,87,1374	0/0:16,0:16:42.14:0,42,685	0/0:35,0:35:99:0,105,1667	0/0:26,0:26:78.27:0,78,1271	0/0:19,0:19:54.18:0,54,881	1/1:2,10:12:36.08:407,36,0	1/1:1,7:8:24.05:268,24,0	0/0:18,0:18:54.18:0,54,881	0/0:21,0:21:63.22:0,63,1028	0/0:20,0:20:60.19:0,60,954	0/0:16,0:16:42.41:0,42,729	0/0:16,0:16:48.14:0,48,729	0/0:31,0:31:90.31:0,90,1445	0/0:13,0:13:39.13:0,39,636	0/0:15,0:15:42.14:0,42,685	0/0:20,0:20:60.20:0,60,978	0/0:14,0:14:42.14:0,42,685	0/0:18,0:18:54.18:0,54,880	0/0:40,0:40:99:0,120,1937	0/0:36,0:36:99:0,108,1761	0/0:5,0:5:15.05:0,15,245
chr10	39574638	.	GT	G	482.19	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.381;DP=569;FS=3.261;HRun=2;HaplotypeScore=56.6810;InbreedingCoeff=0.9914;MQ=80.30;MQ0=0;MQRankSum=-6.354;QD=26.79;ReadPosRankSum=-0.198;VQSLOD=3.2501;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:90.28:0,90,1323	0/0:8,0:8:21.07:0,21,315	0/0:13,0:13:39.04:0,39,515	0/0:17,0:17:48.97:0,49,650	0/0:31,0:31:93.30:0,93,1373	0/0:34,0:34:99:0,99,1446	0/0:13,0:13:39.13:0,39,583	0/0:30,0:30:87.29:0,87,1286	0/0:16,0:16:48.16:0,48,719	0/0:33,0:33:99:0,99,1449	0/0:26,0:26:78.26:0,78,1161	0/0:19,0:19:54.17:0,54,791	1/1:1,10:11:33.09:374,33,0	1/1:0,7:7:21.04:228,21,0	0/0:19,0:19:44.96:0,45,779	0/0:21,0:21:63.21:0,63,944	0/0:19,0:19:57.19:0,57,854	0/0:15,0:15:45.15:0,45,674	0/0:15,0:15:42.14:0,42,613	0/0:30,0:30:87.27:0,87,1275	0/0:13,0:13:39.13:0,39,585	0/0:15,0:15:42.14:0,42,629	0/0:20,0:20:60.17:0,60,874	0/0:15,0:15:45.13:0,45,634	0/0:18,0:18:54.18:0,54,809	0/0:39,0:39:99:0,117,1733	0/0:36,0:36:99:0,108,1616	0/0:6,0:6:18.06:0,18,270
chr10	39574779	.	AAAC	A	11314.51	PASS	AB=1.000;AC=34;AF=0.607;AN=56;BaseQRankSum=15.232;DP=532;FS=9.718;HRun=0;HaplotypeScore=93.7777;InbreedingCoeff=0.8317;MQ=70.62;MQ0=3;MQRankSum=-3.810;QD=36.98;ReadPosRankSum=2.969;VQSLOD=5.5268;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,35:36:90.22:1455,90,0	1/1:0,7:7:12.04:204,12,0	0/0:18,0:14:35.51:0,36,691	0/0:24,0:22:51.42:0,51,860	0/0:30,0:30:87.28:0,87,1805	1/1:1,18:19:42.14:716,42,0	1/1:0,15:15:27.09:460,27,0	1/1:0,16:16:44.37:609,44,0	1/1:0,14:14:21.07:358,21,0	1/1:0,22:22:63.19:1021,63,0	1/1:0,13:13:33.11:560,33,0	0/0:26,0:26:78.18:0,78,1653	0/1:8,0:8:21.80:108,0,22	0/1:5,0:5:20.93:90,0,21	0/0:19,0:19:57.18:0,57,1173	0/0:22,0:22:63.21:0,63,1255	0/0:25,0:25:65.74:0,66,1384	1/1:0,28:28:66.23:1125,66,0	1/1:0,16:16:48.11:735,48,0	1/1:0,16:16:42.11:685,42,0	1/1:0,4:4:6.02:102,6,0	0/0:12,0:12:36.12:0,36,760	0/0:25,0:25:69.14:0,69,1344	0/0:25,0:25:69.23:0,69,1478	1/1:3,23:26:33.11:562,33,0	1/1:0,21:21:63.17:1042,63,0	1/1:0,29:29:60.21:1022,60,0	1/1:0,11:11:27.09:460,27,0
chr10	39574781	.	AC	A	3906.09	PASS	AB=0.676;AC=34;AF=0.607;AN=56;BaseQRankSum=16.925;DP=525;FS=9.690;HRun=1;HaplotypeScore=100.0023;InbreedingCoeff=0.8635;MQ=70.74;MQ0=3;MQRankSum=-3.021;QD=12.98;ReadPosRankSum=3.171;VQSLOD=1.9682;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:35,0:35:85.88:481,86,0	1/1:7,0:7:11.61:65,12,0	0/0:19,0:14:31.99:0,32,443	0/0:24,0:22:52.06:0,52,635	0/0:31,0:31:90.18:0,90,1188	1/1:18,0:18:40.64:227,41,0	1/1:15,0:15:26.12:146,26,0	1/1:16,0:16:43.77:291,44,0	1/1:14,0:14:20.32:113,20,0	1/1:22,0:22:61.14:358,61,0	1/1:13,0:13:31.87:176,32,0	0/0:26,0:26:78.18:0,78,1080	0/1:5,3:8:5.53:91,0,6	0/1:2,3:5:4.71:65,0,5	0/0:19,0:19:57.11:0,57,764	0/0:21,0:21:62.99:0,63,815	0/0:24,0:24:48.44:0,48,883	1/1:28,0:28:63.86:356,64,0	1/1:16,0:16:46.73:283,47,0	1/1:16,0:16:40.71:231,41,0	1/1:4,0:4:5.81:32,6,0	0/0:12,0:12:36.05:0,36,486	0/0:25,0:25:69.13:0,69,918	0/0:23,0:23:69.23:0,69,981	1/1:23,0:23:31.93:178,32,0	1/1:21,0:21:61.02:344,61,0	1/1:29,0:29:58.05:323,58,0	1/1:11,0:11:26.12:146,26,0
chr10	39574785	.	AAAC	A	641.90	PASS	AB=0.960;AC=22;AF=0.393;AN=56;BaseQRankSum=10.488;DP=535;FS=34.155;HRun=0;HaplotypeScore=130.0391;InbreedingCoeff=-0.0691;MQ=67.09;MQ0=3;MQRankSum=-8.680;QD=2.04;ReadPosRankSum=2.352;VQSLOD=0.7771;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:38,0:38:69.43:120,0,69	1/1:7,0:7:8.48:47,8,0	0/0:20,0:15:20.42:0,20,413	0/0:22,0:20:27.40:0,27,679	0/0:31,0:31:87.18:0,87,1777	0/1:19,0:19:10.41:25,0,10	1/1:14,0:14:2.87:26,3,0	0/1:15,0:15:15:15,0,21	0/1:15,0:15:38.03:38,0,38	0/1:23,0:23:14.72:15,0,75	1/1:12,0:12:17.61:107,18,0	0/0:26,0:26:78.26:0,78,1626	0/1:3,3:6:24.97:87,0,25	0/1:5,2:7:15.48:124,0,15	0/0:18,0:18:54.18:0,54,1134	0/0:22,0:22:57.12:0,57,1144	0/0:23,0:23:63.19:0,63,1261	0/1:28,0:28:16.32:16,0,33	0/1:18,0:18:22.48:22,0,121	0/1:18,0:18:35.12:40,0,35	0/1:5,0:5:7.54:8,0,18	0/0:12,0:12:36.12:0,36,733	0/0:23,0:23:66.16:0,66,1193	0/0:24,0:24:69.18:0,69,1392	0/1:24,0:24:29:34,0,29	0/1:22,0:22:7.22:7,0,74	0/1:32,0:32:59.55:60,0,86	1/1:11,0:11:8.85:25,9,0
chr10	39575084	.	TCTGCCTGC	T	232.17	PASS	AB=1.000;AC=8;AF=0.400;AN=20;BaseQRankSum=0.452;DP=326;FS=0.000;HRun=0;HaplotypeScore=34.1661;InbreedingCoeff=0.2723;MQ=17.34;MQ0=225;MQRankSum=-0.581;QD=5.05;ReadPosRankSum=0.710;VQSLOD=0.9281;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	0/0:6,0:7:8.99:0,9,75	0/0:19,0:1:2.92:0,3,17	./.	./.	1/1:5,1:1:3.01:78,3,0	./.	./.	1/1:6,1:2:3.01:55,3,0	0/0:6,0:4:2.94:0,3,18	./.	0/0:27,0:7:3.01:0,3,56	1/1:7,0:9:6.02:112,6,0	./.	./.	0/1:11,0:4:0:0,0,0	./.	0/0:3,0:1:2.98:0,3,22	./.	./.	./.	./.	./.	./.	./.	0/1:11,0:4:10.98:77,0,11	./.	./.
chr10	39575382	.	CTCTTTTTTTTTTTTT	C	2020.56	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=6.681;DP=324;FS=9.764;HRun=0;HaplotypeScore=113.4544;InbreedingCoeff=0.1002;MQ=58.42;MQ0=23;MQRankSum=-1.429;QD=15.54;ReadPosRankSum=2.720;VQSLOD=1.7083;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:2,7:8:3.01:128,3,0	1/1:0,2:2:5.98:148,6,0	0/0:45,0:14:26.62:0,27,299	0/0:39,0:13:16.85:0,17,266	0/0:11,0:11:30.09:0,30,956	0/1:9,0:9:2.26:2,0,81	0/1:11,0:10:63.23:63,0,139	0/0:15,0:11:25.45:0,25,226	0/1:8,0:8:27.98:56,0,28	1/1:3,5:8:20.50:293,20,0	1/1:2,1:8:17.98:304,18,0	0/0:14,0:14:41.96:0,42,1006	0/1:7,0:7:69.97:70,0,381	0/1:2,0:2:14.88:15,0,150	0/0:8,0:8:21.02:0,21,826	0/0:11,0:11:32.82:0,33,1263	0/0:20,0:18:48.01:0,48,2125	1/1:7,2:7:21.03:410,21,0	0/1:15,0:15:99:310,0,126	0/1:11,0:10:58.52:176,0,59	0/0:3,0:3:5.97:0,6,44	0/0:5,0:4:9.03:0,9,331	0/0:19,0:18:44.92:0,45,880	0/0:3,0:2:5.94:0,6,43	0/1:4,0:3:54.23:57,0,54	0/1:10,0:9:67.09:67,0,85	0/1:7,0:7:44.60:45,0,164	0/1:8,0:7:37.89:56,0,38
chr10	39575539	.	C	CTG	11084.19	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=10.162;DP=480;FS=0.365;HRun=0;HaplotypeScore=83.0635;InbreedingCoeff=0.9849;MQ=76.99;MQ0=0;MQRankSum=-4.402;QD=43.13;ReadPosRankSum=1.255;VQSLOD=6.4879;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,18:23:42.14:769,42,0	1/1:0,3:3:9.03:165,9,0	0/0:25,0:25:57.18:0,57,787	0/0:22,0:22:57.19:0,57,817	0/0:13,0:13:36.05:0,36,491	1/1:1,20:21:45.15:824,45,0	1/1:3,20:23:54.18:950,54,0	1/1:1,11:12:33.11:605,33,0	1/1:1,10:11:27.09:495,27,0	1/1:0,9:9:24.08:440,24,0	1/1:0,17:17:39.13:714,39,0	0/0:23,0:23:66.19:0,66,907	1/1:3,11:15:33.11:587,33,0	1/1:1,6:7:18.06:327,18,0	0/0:20,0:20:57.19:0,57,817	0/0:10,0:9:27.09:0,27,387	0/0:60,0:60:99:0,175,2443	1/1:0,17:18:48.16:862,48,0	1/1:4,14:18:45.07:754,45,0	1/1:0,10:10:27.09:494,27,0	1/1:5,20:25:57.20:1045,57,0	0/0:18,0:18:45.14:0,45,628	0/0:7,0:7:21.07:0,21,300	0/0:25,0:25:72.24:0,72,1029	1/1:2,6:8:15.05:275,15,0	1/1:2,6:8:18.06:329,18,0	1/1:4,17:21:57.19:1011,57,0	1/1:0,8:8:24.08:440,24,0
chr10	39575975	.	AACC	A	7482.05	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=13.705;DP=430;FS=0.852;HRun=0;HaplotypeScore=118.7698;InbreedingCoeff=0.9891;MQ=70.70;MQ0=0;MQRankSum=-12.743;QD=28.34;ReadPosRankSum=1.138;VQSLOD=4.9974;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,0:8:17.57:212,18,0	1/1:8,0:8:18.04:218,18,0	0/0:21,0:20:48.15:0,48,905	0/0:14,0:14:33.11:0,33,591	0/0:21,0:21:60.19:0,60,1196	1/1:19,0:19:44.23:603,44,0	1/1:13,0:13:27.05:366,27,0	1/1:13,5:18:34.79:479,35,0	1/1:10,0:10:20.19:289,20,0	1/1:23,0:23:56.13:786,56,0	1/1:17,0:17:29.45:358,29,0	0/0:11,0:11:24.06:0,24,467	1/1:13,1:14:27.27:392,27,0	1/1:9,0:9:20.18:288,20,0	0/0:15,0:15:39.75:0,40,810	0/0:21,0:21:51.18:0,51,1081	0/0:20,0:20:60.07:0,60,1180	1/1:18,0:18:24.76:323,25,0	1/1:12,0:12:27.49:322,27,0	1/1:18,0:18:39.49:544,39,0	1/1:11,0:11:11.33:150,11,0	0/0:14,0:14:39.13:0,39,815	0/0:17,0:17:42.14:0,42,842	0/0:12,0:11:30.10:0,30,635	1/1:23,0:23:51.17:745,51,0	1/1:11,0:11:26.52:323,27,0	1/1:22,1:23:56.19:757,56,0	1/1:9,0:9:26.80:327,27,0
chr10	39575989	.	AC	A	2151.27	PASS	AB=0.665;AC=23;AF=0.411;AN=56;BaseQRankSum=13.043;DP=446;FS=6.056;HRun=1;HaplotypeScore=133.9434;InbreedingCoeff=0.0653;MQ=70.33;MQ0=0;MQRankSum=-14.331;QD=8.00;ReadPosRankSum=5.540;VQSLOD=1.1948;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,6:8:17.46:102,17,0	1/1:3,3:6:12.32:89,12,0	0/0:18,0:17:51.15:0,51,750	0/0:18,0:18:50.95:0,51,607	0/0:27,0:27:78.24:0,78,1195	1/1:3,13:16:23.68:202,24,0	0/1:5,9:14:89.76:90,0,99	0/1:15,10:25:99:109,0,133	0/1:3,6:9:19.06:97,0,19	0/1:13,17:30:99:222,0,120	0/1:4,10:14:3.51:104,0,4	0/0:11,0:11:33.11:0,33,513	0/1:6,8:14:9.05:141,0,9	1/1:4,5:9:4.12:104,4,0	0/0:15,0:15:41.85:0,42,657	0/0:19,0:19:57.19:0,57,891	0/0:22,0:22:60.20:0,60,938	0/1:11,5:16:21.44:103,0,21	0/1:11,4:15:75.68:76,0,93	0/1:7,11:18:15.61:171,0,16	0/1:8,2:10:34.71:35,0,67	0/0:18,0:18:51.17:0,51,797	0/0:18,0:18:54.18:0,54,844	0/0:11,0:10:33.10:0,33,493	0/1:8,17:25:55.11:206,0,55	0/1:5,5:10:6.44:99,0,6	1/1:6,15:21:19.60:295,20,0	0/1:3,6:9:25.04:92,0,25
chr10	39575993	.	ATT	A	4210.98	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=15.818;DP=415;FS=0.404;HRun=2;HaplotypeScore=128.5304;InbreedingCoeff=0.9719;MQ=73.29;MQ0=0;MQRankSum=-13.304;QD=17.92;ReadPosRankSum=4.127;VQSLOD=2.5931;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,6:8:15.38:125,15,0	1/1:0,3:3:8.36:57,8,0	0/0:18,0:17:51.13:0,51,961	0/0:20,0:20:54.12:0,54,898	0/0:27,0:27:81.28:0,81,1608	1/1:1,13:14:36.14:273,36,0	1/1:5,9:14:25.91:192,26,0	1/1:15,10:25:50.73:426,51,0	1/1:2,6:8:21.40:168,21,0	1/1:11,17:29:71.39:524,71,0	1/1:2,10:12:23.01:168,23,0	0/0:11,0:11:33.11:0,33,660	1/1:4,8:12:27.37:220,27,0	1/1:4,5:9:26.87:205,27,0	0/0:15,0:15:43.39:0,43,830	0/0:19,0:19:57.20:0,57,1130	0/0:22,0:22:66.23:0,66,1306	1/1:4,5:9:21.08:158,21,0	1/1:7,5:12:25.75:202,26,0	1/1:3,11:14:34.33:275,34,0	1/1:7,2:9:7.20:65,7,0	0/0:19,0:19:57.20:0,57,1121	0/0:18,0:18:54.19:0,54,1079	0/0:11,0:10:33.11:0,33,651	1/1:6,17:23:47.04:405,47,0	1/1:3,5:8:20.38:180,20,0	1/1:2,16:18:52.84:411,53,0	1/1:2,6:8:20.41:155,20,0
chr10	39576048	.	GA	G	6579.54	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=14.665;DP=453;FS=0.822;HRun=9;HaplotypeScore=106.6703;InbreedingCoeff=0.9919;MQ=70.94;MQ0=2;MQRankSum=-10.456;QD=23.25;ReadPosRankSum=-0.391;VQSLOD=4.3721;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,6:6:18.01:164,18,0	1/1:1,8:9:27.01:246,27,0	0/0:22,0:19:25.06:0,25,266	0/0:12,0:11:21.12:0,21,218	0/0:25,0:25:69.20:0,69,796	1/1:0,12:12:36.02:329,36,0	1/1:3,10:13:30.01:274,30,0	1/1:4,19:23:57.01:517,57,0	1/1:2,7:9:24:214,24,0	1/1:4,28:33:80.08:720,80,0	1/1:1,19:20:54.03:493,54,0	0/0:16,0:16:45.13:0,45,519	1/1:1,14:15:39.02:356,39,0	1/1:0,9:9:27.01:247,27,0	0/0:12,0:12:27.07:0,27,303	0/0:19,0:19:54.16:0,54,623	0/0:18,0:18:51.13:0,51,569	1/1:1,8:9:24.01:220,24,0	1/1:6,13:21:40.08:341,40,0	1/1:4,22:26:69.02:623,69,0	1/1:0,4:4:12.01:110,12,0	0/0:12,0:14:35.77:0,36,375	0/0:21,0:22:57:0,57,638	0/0:10,0:9:27.08:0,27,311	1/1:3,22:25:66.03:602,66,0	1/1:1,16:17:51.03:467,51,0	1/1:3,14:17:39.02:356,39,0	1/1:2,13:15:33:302,33,0
chr10	39576103	.	TG	T	12878.17	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=14.199;DP=519;FS=4.831;HRun=1;HaplotypeScore=98.7549;InbreedingCoeff=0.9697;MQ=65.84;MQ0=1;MQRankSum=-7.474;QD=37.22;ReadPosRankSum=1.620;VQSLOD=5.1070;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,12:12:27.09:377,27,0	1/1:0,12:12:33.11:461,33,0	0/0:9,0:9:27.08:0,27,383	0/0:9,0:6:3.04:0,3,180	0/0:31,0:31:93.30:0,93,1462	1/1:0,18:18:45.15:628,45,0	1/1:0,7:7:15.05:209,15,0	1/1:0,31:31:93.24:1239,93,0	1/1:0,14:14:33.11:461,33,0	1/1:2,31:33:99:1353,99,0	1/1:0,18:18:45.15:622,45,0	0/0:17,0:17:51.16:0,51,788	1/1:0,19:19:54.18:754,54,0	1/1:0,9:9:27.09:377,27,0	0/0:16,0:16:48.16:0,48,757	0/0:25,0:25:75.24:0,75,1171	0/0:17,0:17:51.17:0,51,815	1/1:0,13:13:33.11:459,33,0	1/1:2,22:24:41.41:825,41,0	1/1:2,29:31:78.21:1052,78,0	1/1:0,6:6:18.06:243,18,0	0/0:14,0:14:42.14:0,42,667	0/0:26,0:26:78.27:0,78,1244	0/0:9,0:9:27.09:0,27,426	1/1:0,26:26:75.25:1048,75,0	1/1:2,17:19:57.17:767,57,0	1/1:1,36:37:99:1416,102,0	1/1:0,17:17:42.14:586,42,0
chr10	39576565	.	AT	A	2548.60	PASS	AB=0.947;AC=11;AF=0.196;AN=56;BaseQRankSum=9.705;DP=678;FS=0.000;HRun=10;HaplotypeScore=68.8791;InbreedingCoeff=0.8521;MQ=74.38;MQ0=0;MQRankSum=-3.549;QD=17.22;ReadPosRankSum=-0.465;VQSLOD=3.9099;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,27:31:74.98:651,75,0	1/1:3,16:19:11.80:331,12,0	0/1:17,1:18:5.85:6,0,136	0/0:14,0:14:16.75:0,17,255	0/0:24,0:24:57.15:0,57,630	0/0:20,1:21:33.91:0,34,568	0/0:29,0:29:66.16:0,66,721	0/0:34,0:35:87.05:0,87,927	0/0:23,0:23:66.16:0,66,720	1/1:4,32:36:92.95:803,93,0	1/1:2,15:17:38.95:331,39,0	0/0:25,0:25:66.18:0,66,730	0/0:20,0:20:57.14:0,57,622	0/0:16,0:16:42.10:0,42,456	0/0:27,0:27:72.19:0,72,797	0/0:24,0:23:66.16:0,66,721	0/0:16,0:16:45.12:0,45,498	1/1:3,24:27:68.98:599,69,0	0/0:18,2:20:2.09:0,2,467	0/0:29,3:32:12.07:0,12,810	0/0:24,0:24:63.13:0,63,683	0/0:28,1:29:78.13:0,78,821	0/0:29,0:29:81.22:0,81,896	0/0:20,0:19:54.15:0,54,597	0/0:30,0:30:81.21:0,81,890	0/0:35,0:35:87.20:0,87,938	0/0:28,0:28:81.18:0,81,882	0/0:8,0:8:21.04:0,21,223
chr10	39577167	.	T	TA	4582.12	PASS	AB=0.981;AC=24;AF=0.429;AN=56;BaseQRankSum=-2.432;DP=420;FS=3.222;HRun=8;HaplotypeScore=69.2877;InbreedingCoeff=0.8200;MQ=72.90;MQ0=6;MQRankSum=-4.394;QD=22.35;ReadPosRankSum=-2.558;VQSLOD=4.2920;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:36.01:0,36,329	0/0:5,0:5:9:0,9,82	0/1:24,0:7:2.97:3,0,31	0/0:37,0:20:9.15:0,9,117	0/0:32,0:32:90.01:0,90,810	1/1:4,10:14:36.11:415,36,0	1/1:4,2:6:9.01:94,9,0	1/1:17,16:33:75.08:807,75,0	1/1:4,8:12:30.07:334,30,0	0/0:15,0:15:39.02:0,39,357	0/0:13,0:13:30:0,30,274	0/0:8,0:8:18.01:0,18,165	0/0:7,0:7:12:0,12,110	0/0:9,0:9:23.98:0,24,210	0/0:8,0:8:20.99:0,21,184	0/0:11,0:11:27.01:0,27,247	0/0:21,0:21:60.01:0,60,544	0/0:17,0:17:47.93:0,48,419	1/1:8,7:14:35.59:389,36,0	1/1:5,12:17:48.10:523,48,0	1/1:1,1:2:3.01:35,3,0	0/0:7,0:7:2.99:0,3,27	0/0:10,0:9:15:0,15,134	0/1:7,0:7:1.84:2,0,119	1/1:12,15:27:75.21:854,75,0	1/1:6,15:21:23.79:526,24,0	1/1:8,12:20:42.02:466,42,0	1/1:2,3:5:12.03:134,12,0
chr10	39577204	.	A	AATG	21031.26	PASS	AB=0.909;AC=43;AF=0.768;AN=56;BaseQRankSum=-3.337;DP=483;FS=0.000;HRun=0;HaplotypeScore=75.8365;InbreedingCoeff=0.8677;MQ=70.38;MQ0=1;MQRankSum=-10.505;QD=58.26;ReadPosRankSum=-0.076;VQSLOD=6.3675;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,20:20:48.16:1114,48,0	1/1:1,4:6:15.05:338,15,0	0/0:21,0:19:48.25:0,48,778	0/0:29,0:21:24.31:0,24,372	0/0:28,0:28:84.29:0,84,1482	1/1:0,21:20:60.21:1416,60,0	1/1:0,7:8:18.06:425,18,0	1/1:14,28:45:99:2694,123,0	1/1:2,15:17:48.16:1132,48,0	1/1:5,19:24:72.25:1689,72,0	1/1:2,8:11:27.09:615,27,0	1/1:3,7:11:20.93:496,21,0	1/1:3,7:10:27.09:592,27,0	1/1:6,10:16:39.13:888,39,0	0/0:12,0:12:36.11:0,36,607	0/1:9,1:10:40.61:41,0,411	0/0:25,0:24:72.18:0,72,1198	1/1:6,14:20:54.19:1246,54,0	1/1:8,17:25:75.21:1610,75,0	1/1:5,10:15:42.14:946,42,0	1/1:3,3:6:6.02:130,6,0	0/0:5,0:5:15.05:0,15,258	1/1:5,9:14:33.11:742,33,0	1/1:1,7:9:14.98:336,15,0	1/1:3,10:14:30.10:708,30,0	1/1:7,25:34:99:2208,99,0	1/1:0,18:18:54.19:1274,54,0	1/1:3,3:6:18.06:392,18,0
chr10	39577662	.	GTGT	G	9163.75	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=16.062;DP=603;FS=13.318;HRun=0;HaplotypeScore=111.6656;InbreedingCoeff=0.9964;MQ=70.11;MQ0=4;MQRankSum=-8.489;QD=38.67;ReadPosRankSum=2.633;VQSLOD=5.5138;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,36:36:75.04:1193,75,0	1/1:1,9:10:27.09:433,27,0	0/0:32,0:26:65.89:0,66,1046	0/0:25,0:22:50.34:0,50,820	0/0:24,0:24:72.23:0,72,1483	0/0:27,0:27:81.26:0,81,1686	0/0:18,0:18:51.17:0,51,1029	1/1:3,26:29:77.56:1162,78,0	0/0:22,0:22:63.22:0,63,1364	1/1:0,22:22:66.23:1075,66,0	1/1:0,12:12:33.07:509,33,0	0/0:25,0:25:72.22:0,72,1436	0/0:19,0:19:54.18:0,54,1192	0/0:26,0:26:72.25:0,72,1508	0/0:22,0:22:66.23:0,66,1343	0/0:21,0:21:60.21:0,60,1273	0/0:37,0:37:99:0,100,2092	1/1:2,23:25:21.98:786,22,0	1/1:3,12:13:33.11:536,33,0	1/1:1,11:12:33.11:537,33,0	1/1:3,16:19:42.94:628,43,0	0/0:24,0:24:69.21:0,69,1382	0/0:13,0:13:39.12:0,39,802	0/0:31,0:31:93.32:0,93,1971	1/1:0,15:15:39.13:636,39,0	1/1:0,14:14:42.14:685,42,0	1/1:0,19:19:48.16:783,48,0	1/1:2,7:9:13.86:200,14,0
chr10	39578683	.	C	CAACA	15359.84	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-16.629;DP=589;FS=4.846;HRun=0;HaplotypeScore=105.7964;InbreedingCoeff=0.9948;MQ=87.31;MQ0=0;MQRankSum=-8.671;QD=69.82;ReadPosRankSum=-1.456;VQSLOD=6.3798;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,111,2028	0/0:7,0:7:21.07:0,21,392	0/0:26,0:26:69.20:0,69,1197	0/0:18,0:18:51.16:0,51,913	0/0:17,0:17:45.15:0,45,840	0/0:22,0:22:54.17:0,54,977	0/0:24,0:24:60.19:0,60,1089	1/1:6,23:31:84.28:2070,84,0	0/0:25,0:25:72.23:0,72,1313	0/0:17,0:17:42.13:0,42,784	0/0:21,0:21:57.18:0,57,1033	0/0:26,0:26:78.27:0,78,1456	1/1:3,15:18:48.16:1253,48,0	1/1:3,15:19:54.19:1367,54,0	0/0:23,0:22:69.24:0,69,1281	0/0:15,0:15:45.14:0,45,796	0/0:28,0:28:72.25:0,72,1343	0/0:20,0:20:54.13:0,54,940	1/1:9,14:24:66.22:1655,66,0	1/1:1,19:21:54.15:1353,54,0	1/1:2,31:33:84.16:2031,84,0	0/0:4,0:4:12.04:0,12,224	0/0:16,0:16:42.13:0,42,752	0/0:19,0:19:54.14:0,54,959	1/1:1,19:20:60.16:1539,60,0	1/1:1,16:18:51.16:1304,51,0	1/1:2,20:22:63.22:1672,63,0	1/1:1,13:14:42.14:1115,42,0
chr10	39579476	.	CAAAAA	C	1069.44	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.407;DP=539;FS=0.000;HRun=16;HaplotypeScore=123.0358;InbreedingCoeff=0.9573;MQ=48.09;MQ0=15;MQRankSum=-4.302;QD=30.56;ReadPosRankSum=3.372;VQSLOD=2.4884;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:31:74.73:0,75,1606	0/0:8,0:9:24.08:0,24,481	0/0:15,0:9:17.70:0,18,340	0/0:11,0:9:18.53:0,19,305	0/0:24,0:26:65.53:0,66,1162	0/0:8,0:14:24.08:0,24,545	0/0:11,0:18:42.14:0,42,925	0/0:36,0:35:73:0,73,1424	0/0:16,0:26:45.58:0,46,828	0/0:30,0:26:72.20:0,72,1677	0/0:12,0:15:42.14:0,42,912	1/1:3,11:13:33.07:512,33,0	0/0:19,0:18:36.85:0,37,652	0/0:18,0:17:26.72:0,27,324	0/0:16,0:19:51.17:0,51,1055	0/0:16,0:17:39.13:0,39,906	0/0:22,0:22:54.32:0,54,1281	0/0:22,0:22:60.20:0,60,1272	0/0:19,0:18:34.93:0,35,654	0/0:12,0:21:38.81:0,39,551	0/0:6,0:7:18.01:0,18,308	0/0:13,0:15:29.94:0,30,677	1/1:2,11:12:32.78:510,33,0	1/1:3,5:7:11.84:186,12,0	0/0:14,0:19:30.10:0,30,589	0/0:25,0:24:52.07:0,52,881	0/0:17,0:28:42.57:0,43,763	0/0:10,0:7:9.03:0,9,187
chr10	39579852	.	TGGAGGGGCAGTGAGGCTTCGTCA	T	4051.07	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=7.781;DP=721;FS=0.833;HRun=0;HaplotypeScore=420.2292;InbreedingCoeff=0.9111;MQ=86.99;MQ0=0;MQRankSum=-7.589;QD=130.68;ReadPosRankSum=3.602;VQSLOD=2.7365;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,151,13487	0/0:21,0:21:63.22:0,63,5643	0/0:25,0:25:75.26:0,75,5010	0/0:27,0:27:78.27:0,78,5331	0/0:26,0:26:78.27:0,78,7345	0/0:19,0:19:57.20:0,57,4614	0/0:25,0:25:75.26:0,75,7219	0/0:20,0:20:60.21:0,60,4780	0/0:30,0:30:87.28:0,87,7026	0/0:33,0:32:96.33:0,96,9185	0/0:15,0:15:42.14:0,42,3772	1/1:0,17:17:51.18:3269,51,0	0/0:33,0:33:99:0,99,9195	0/0:33,0:33:99:0,99,9947	0/0:44,0:44:99:0,132,13152	0/0:26,0:26:78.27:0,78,7718	0/0:32,0:32:96.30:0,96,9044	0/0:39,0:39:99:0,117,10626	0/0:18,0:18:54.19:0,54,3559	0/0:20,0:20:57.20:0,57,5184	0/0:66,0:66:99:0,199,17544	0/0:19,0:19:57.20:0,57,5118	1/1:0,4:4:3.01:196,3,0	1/1:0,10:10:9.03:587,9,0	0/0:13,0:13:39.13:0,39,3390	0/0:24,0:24:69.23:0,69,6040	0/0:15,0:15:45.15:0,45,4586	0/0:17,0:17:51.18:0,51,4910
chr10	39581481	.	GGT	G	1966.89	PASS	AB=0.829;AC=25;AF=0.446;AN=56;BaseQRankSum=3.110;DP=653;FS=0.478;HRun=0;HaplotypeScore=143.4279;InbreedingCoeff=0.7374;MQ=63.12;MQ0=5;MQRankSum=-3.034;QD=6.39;ReadPosRankSum=5.440;VQSLOD=2.7694;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,0:18:8.52:42,9,0	1/1:3,0:12:17.04:84,17,0	0/0:29,0:17:5.98:0,6,47	0/0:31,0:21:17.92:0,18,206	1/1:9,9:20:12.49:289,12,0	0/0:17,0:17:2.63:0,3,296	0/1:25,2:28:3.20:3,0,356	0/0:32,0:32:26.81:0,27,250	0/1:28,2:30:13.99:14,0,634	1/1:10,0:33:42.61:209,43,0	1/1:5,0:16:25.57:125,26,0	0/0:20,0:28:37.81:0,38,510	1/1:6,0:13:19.89:98,20,0	1/1:10,0:24:28.32:138,28,0	1/1:12,17:30:14.90:289,15,0	1/1:10,14:25:32.76:335,33,0	1/1:11,14:26:14.42:316,14,0	1/1:5,0:12:8.28:38,8,0	0/0:21,0:24:26.62:0,27,189	0/0:9,0:19:12:0,12,104	0/0:21,0:20:7.96:0,8,44	0/1:9,10:20:1.23:194,0,1	0/0:17,0:21:24.40:0,24,219	0/0:25,0:33:39.55:0,40,395	0/0:11,0:28:9:0,9,79	0/0:22,0:22:38.82:0,39,338	0/0:10,0:26:15.44:0,15,127	0/0:9,0:12:8.60:0,9,62
chr10	39581513	.	TATGTTCAG	T	56.77	PASS	AB=0.931;AC=4;AF=0.071;AN=56;BaseQRankSum=-1.887;DP=645;FS=31.792;HRun=0;HaplotypeScore=231.3453;InbreedingCoeff=-0.0731;MQ=65.65;MQ0=10;MQRankSum=0.737;QD=0.53;ReadPosRankSum=-5.612;VQSLOD=0.0232;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:62.01:0,62,1691	0/0:12,0:12:26.67:0,27,414	0/0:43,0:25:72.21:0,72,2442	0/0:43,0:31:78.51:0,79,2210	0/0:20,0:19:48.16:0,48,1474	0/0:13,0:13:32.98:0,33,1271	0/0:25,0:25:69.10:0,69,2641	0/1:24,0:24:11.92:12,0,1563	0/0:27,0:27:72.06:0,72,2426	0/0:32,0:32:71.96:0,72,1342	0/0:16,0:16:37.96:0,38,592	0/0:24,0:24:27:0,27,1583	0/0:14,0:14:40.91:0,41,796	0/0:24,0:24:60.18:0,60,1230	0/0:26,0:26:50.97:0,51,1433	0/0:26,0:26:57.19:0,57,1827	0/0:23,0:23:50.75:0,51,1578	0/0:18,0:17:33.58:0,34,827	0/0:18,0:17:47.99:0,48,1528	0/0:13,0:13:30.10:0,30,798	0/0:35,0:35:28.02:0,28,2092	0/0:20,0:20:48.16:0,48,1612	0/1:21,0:21:7.76:8,0,1378	0/1:36,0:36:41.91:42,0,2655	0/0:16,0:16:23.91:0,24,738	0/1:16,10:25:98.41:98,0,1659	0/0:12,0:12:29.57:0,30,877	0/0:8,0:8:24.05:0,24,636
chr10	39581652	.	T	TCTC	12655.60	PASS	AB=0.543;AC=21;AF=0.375;AN=56;BaseQRankSum=-15.390;DP=678;FS=7.423;HRun=0;HaplotypeScore=93.7489;InbreedingCoeff=0.9486;MQ=91.68;MQ0=0;MQRankSum=-5.304;QD=44.72;ReadPosRankSum=1.083;VQSLOD=6.7018;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:87.25:0,87,1313	0/0:7,0:7:18.06:0,18,282	0/0:30,0:30:65.71:0,66,983	0/0:32,0:32:69.06:0,69,1089	0/0:19,0:19:54.18:0,54,844	0/0:23,0:23:57.19:0,57,889	0/0:30,0:30:81.28:0,81,1264	1/1:4,24:30:78.25:1626,78,0	0/0:20,0:20:57.19:0,57,884	0/0:24,0:24:66.22:0,66,1011	0/0:13,0:13:30.10:0,30,469	1/1:0,28:29:75.26:1622,75,0	0/0:16,0:16:42.14:0,42,643	0/0:27,0:27:60.20:0,60,938	0/0:28,0:28:81.28:0,81,1264	0/0:23,0:23:63.21:0,63,984	0/0:28,0:28:75.24:0,75,1145	0/0:22,0:22:63.21:0,63,985	1/1:5,11:16:33.11:713,33,0	1/1:4,17:21:36.12:776,36,0	1/1:14,40:54:85.17:1820,85,0	0/0:19,0:19:48.16:0,48,751	1/1:2,13:18:33.11:714,33,0	1/1:6,30:36:72.25:1559,72,0	1/1:1,20:21:48.16:1039,48,0	0/1:3,16:19:1.81:824,0,2	1/1:5,28:35:81.28:1703,81,0	1/1:0,4:4:12.04:260,12,0
chr10	39582619	.	A	AG	129.18	PASS	AB=0.788;AC=3;AF=0.056;AN=54;BaseQRankSum=4.883;DP=253;FS=9.354;HRun=1;HaplotypeScore=54.1776;InbreedingCoeff=-0.0742;MQ=49.79;MQ0=0;MQRankSum=-3.091;QD=3.80;ReadPosRankSum=1.593;VQSLOD=-0.2837;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:36.12:0,36,466	0/0:2,1:3:5.88:0,6,67	0/0:8,0:6:21.03:0,21,242	0/0:5,0:3:12.04:0,12,154	0/0:3,0:3:9.02:0,9,97	0/0:9,0:9:24.04:0,24,288	0/0:6,0:6:12.04:0,12,155	0/0:13,0:13:30.09:0,30,377	0/0:15,0:15:42.13:0,42,521	0/1:13,6:19:99:192,0,376	0/1:7,3:10:5.48:5,0,146	0/0:5,0:5:15.04:0,15,170	0/0:7,0:7:21.05:0,21,239	0/0:10,0:10:27.08:0,27,328	0/0:13,0:13:33.06:0,33,401	0/0:8,0:8:21.06:0,21,264	0/0:12,0:12:33.11:0,33,424	0/1:4,1:5:24.11:24,0,140	0/0:6,0:4:12.04:0,12,156	0/0:18,0:18:47.16:0,47,557	0/0:10,0:10:24.02:0,24,269	0/0:6,0:6:15.04:0,15,176	./.	0/0:6,0:6:3.01:0,3,39	0/0:12,0:12:33.06:0,33,378	0/0:6,0:6:18.06:0,18,233	0/0:16,0:16:45.12:0,45,551	0/0:6,0:6:17.99:0,18,195
chr10	39582935	.	T	TG	19607.21	PASS	AC=54;AF=1.000;AN=54;DP=506;FS=0.000;HRun=1;HaplotypeScore=239.5057;InbreedingCoeff=-0.0081;MQ=36.92;MQ0=0;QD=38.90;VQSLOD=4.0306;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,27:29:72.24:1076,72,0	1/1:3,3:6:12.01:156,12,0	1/1:1,1:2:3.01:45,3,0	./.	1/1:3,21:24:57.19:850,57,0	1/1:1,20:21:60.19:877,60,0	1/1:4,18:22:57.11:793,57,0	1/1:4,24:28:81.19:1157,81,0	1/1:7,14:21:51.09:705,51,0	1/1:2,22:24:72.24:1076,72,0	1/1:6,11:17:33.10:474,33,0	1/1:1,33:34:99:1475,99,0	1/1:2,20:22:63.21:942,63,0	1/1:2,16:18:51.13:737,51,0	1/1:2,23:25:69.23:1031,69,0	1/1:2,24:26:75.21:1094,75,0	1/1:2,11:13:33.07:468,33,0	1/1:0,8:8:18.06:269,18,0	1/1:1,19:20:60.12:839,60,0	1/1:4,6:10:18.06:268,18,0	1/1:3,13:16:30.06:424,30,0	1/1:2,18:20:57.17:813,57,0	1/1:2,16:18:48.12:692,48,0	1/1:1,8:9:21.07:314,21,0	1/1:2,12:14:42.06:576,42,0	1/1:1,22:23:69.23:1031,69,0	1/1:2,25:27:75.25:1112,75,0	1/1:0,7:7:21.07:313,21,0
chr10	39582952	.	T	TTG	18168.88	PASS	AB=1.000;AC=54;AF=0.964;AN=56;BaseQRankSum=0.100;DP=477;FS=0.000;HRun=0;HaplotypeScore=220.6275;InbreedingCoeff=-0.0369;MQ=55.19;MQ0=0;MQRankSum=-2.870;QD=38.09;ReadPosRankSum=2.419;VQSLOD=4.6736;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,29:33:78.19:1084,78,0	1/1:0,4:4:12.04:169,12,0	0/1:5,0:6:6.81:58,0,7	0/1:9,0:9:28.31:81,0,28	1/1:5,17:23:56.28:669,56,0	1/1:1,15:16:44.98:620,45,0	1/1:3,13:16:39.60:548,40,0	1/1:2,25:27:81.23:1331,81,0	1/1:2,17:19:56.83:735,57,0	1/1:2,22:24:72.09:1090,72,0	1/1:0,14:14:42.05:534,42,0	1/1:1,29:30:90.19:1310,90,0	1/1:1,15:16:48.16:677,48,0	1/1:4,14:18:53.83:729,54,0	1/1:1,23:24:72.24:1015,72,0	1/1:3,24:27:79.37:1091,79,0	1/1:1,14:15:35.91:484,36,0	1/1:1,4:5:12.04:178,12,0	1/1:1,14:15:45.15:695,45,0	1/1:2,8:10:29.92:432,30,0	1/1:2,11:13:15.05:200,15,0	1/1:3,18:21:51.08:755,51,0	1/1:1,13:14:33.02:422,33,0	1/1:3,7:10:26.61:269,27,0	1/1:1,10:11:32.98:463,33,0	1/1:1,20:21:63.20:999,63,0	1/1:2,28:30:84.28:1266,84,0	1/1:0,6:6:18.06:265,18,0
chr10	39582954	.	AG	A	7292.93	PASS	AB=1.000;AC=55;AF=0.982;AN=56;BaseQRankSum=-2.181;DP=485;FS=4.007;HRun=4;HaplotypeScore=251.8513;InbreedingCoeff=0.2936;MQ=56.40;MQ0=0;MQRankSum=0.671;QD=15.04;ReadPosRankSum=6.831;VQSLOD=3.1965;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:6,27:33:56.31:376,56,0	1/1:0,4:4:11.72:70,12,0	1/1:7,0:7:13.01:49,13,0	0/1:9,0:9:5.24:5,0,37	1/1:6,16:22:45.61:292,46,0	1/1:2,15:17:47.10:317,47,0	1/1:3,13:16:37.88:224,38,0	1/1:7,21:28:66.63:577,67,0	1/1:3,17:20:56.62:358,57,0	1/1:4,20:24:57.05:470,57,0	1/1:2,12:14:34.46:198,34,0	1/1:7,23:30:58.09:382,58,0	1/1:1,15:16:46.72:280,47,0	1/1:6,13:19:49.64:316,50,0	1/1:2,22:24:70.11:418,70,0	1/1:5,23:28:66.48:434,66,0	1/1:1,14:15:34.90:220,35,0	1/1:1,4:5:11.85:79,12,0	1/1:2,14:16:47.31:326,47,0	1/1:2,8:10:23.68:189,24,0	1/1:3,11:14:16.47:111,16,0	1/1:5,16:21:42.70:276,43,0	1/1:4,10:14:26.37:160,26,0	1/1:3,7:10:18.71:92,19,0	1/1:2,9:11:18.86:154,19,0	1/1:7,15:22:42.87:315,43,0	1/1:4,26:30:72.85:492,73,0	1/1:0,6:6:17.60:115,18,0
chr10	39583315	.	AGT	A	1330.76	PASS	AB=0.739;AC=13;AF=0.241;AN=54;BaseQRankSum=-2.675;DP=692;FS=3.830;HRun=0;HaplotypeScore=117.1384;InbreedingCoeff=0.2968;MQ=63.53;MQ0=19;MQRankSum=2.646;QD=6.37;ReadPosRankSum=1.883;VQSLOD=3.2939;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:29,11:42:15.21:229,0,15	1/1:5,2:7:3.01:33,3,0	./.	0/0:51,0:23:2.98:0,3,22	0/0:14,0:20:6:0,6,52	0/0:17,0:19:26.54:0,27,223	0/0:18,0:23:2.96:0,3,26	0/0:22,0:21:17.73:0,18,115	0/0:12,0:16:21.98:0,22,168	1/1:23,5:28:2.96:33,3,0	1/1:13,4:18:11.86:111,12,0	0/1:6,13:20:20.16:245,0,20	0/0:14,0:21:8.99:0,9,74	0/0:10,0:23:9:0,9,79	0/0:12,0:19:24.03:0,24,266	0/0:6,0:20:26.99:0,27,234	0/0:16,0:31:36.01:0,36,352	0/1:18,11:28:14.85:266,0,15	0/0:17,0:15:8.98:0,9,87	0/0:11,0:19:5.70:0,6,54	0/0:37,0:51:23.86:0,24,221	0/0:8,0:17:17.42:0,17,166	0/1:7,10:17:17.22:207,0,17	1/1:9,13:22:32.92:343,33,0	0/0:12,0:21:6.88:0,7,55	0/1:17,0:22:19.30:19,0,156	0/0:20,0:33:34.64:0,35,272	0/0:3,0:14:14.99:0,15,129
chr10	39584386	.	T	TTG	16615.61	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=8.342;DP=1046;FS=17.454;HRun=0;HaplotypeScore=177.7600;InbreedingCoeff=0.9845;MQ=57.55;MQ0=2;MQRankSum=-3.753;QD=36.84;ReadPosRankSum=-1.716;VQSLOD=4.1889;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:15,40:55:99:2489,156,0	1/1:2,9:11:15.05:251,15,0	0/0:52,0:31:8.37:0,8,293	0/0:42,0:22:39.10:0,39,484	0/0:35,0:35:99:0,99,1208	0/0:21,0:21:54.13:0,54,658	0/0:39,0:39:93.22:0,93,1126	1/1:10,37:47:99:1667,108,0	0/0:41,0:41:99:0,105,1310	1/1:7,32:39:99:1545,99,0	1/1:5,22:27:66.22:1090,66,0	0/0:44,0:44:99:0,102,1268	0/0:36,0:36:96.29:0,96,1206	0/0:53,0:53:99:0,144,1826	0/0:46,0:46:99:0,120,1513	0/0:33,0:33:87.27:0,87,1096	0/0:40,0:40:96.04:0,96,1188	1/1:2,22:24:57.19:953,57,0	1/1:13,12:25:57.09:884,57,0	1/1:9,12:21:45.12:686,45,0	1/1:60,56:115:99:3724,235,0	0/0:20,0:20:48.14:0,48,594	0/0:23,0:23:57.06:0,57,689	0/0:67,0:68:99:0,180,2211	1/1:5,21:26:69.23:1071,69,0	1/1:15,17:31:84.15:1242,84,0	1/1:7,15:22:51.16:813,51,0	1/1:0,4:4:12.04:201,12,0
chr10	39584433	.	CAT	C	1511.19	PASS	AB=0.979;AC=9;AF=0.161;AN=56;BaseQRankSum=14.869;DP=1072;FS=0.333;HRun=0;HaplotypeScore=245.5474;InbreedingCoeff=0.0836;MQ=57.52;MQ0=6;MQRankSum=-1.304;QD=5.46;ReadPosRankSum=1.120;VQSLOD=2.8057;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,161,2931	0/0:10,0:10:23.83:0,24,364	0/0:51,0:27:54.67:0,55,976	0/0:59,1:23:47.11:0,47,705	0/0:29,0:29:81.20:0,81,1433	0/0:22,0:22:60.21:0,60,1189	0/0:37,0:37:99:0,105,2029	0/1:32,0:32:99:191,0,212	0/0:45,0:45:99:0,129,2250	0/0:38,0:38:99:0,99,2024	0/0:27,0:27:78.12:0,78,1427	0/0:48,0:48:99:0,129,1564	0/0:41,0:41:99:0,109,2308	0/0:45,0:45:99:0,132,2426	0/0:43,0:43:80.76:0,81,2195	0/0:42,0:42:99:0,126,2287	0/0:41,0:41:80.49:0,80,1985	0/0:24,0:24:72.17:0,72,1204	0/1:26,2:27:99:220,0,100	0/1:11,1:12:11.79:90,0,12	0/1:110,0:108:99:363,0,112	0/0:38,0:38:99:0,114,2188	0/0:26,0:26:63.18:0,63,802	0/0:72,0:72:99:0,186,2226	0/1:28,0:28:62.68:63,0,85	1/1:29,1:29:13.43:357,13,0	0/1:30,0:30:15.30:309,0,15	0/1:7,0:7:27.55:63,0,28
chr10	39584434	.	ATG	A	5078.23	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=12.190;DP=1085;FS=1.955;HRun=0;HaplotypeScore=236.8538;InbreedingCoeff=0.9940;MQ=57.58;MQ0=7;MQRankSum=-6.187;QD=18.40;ReadPosRankSum=-1.023;VQSLOD=4.3162;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,141,2281	0/0:10,0:10:16.68:0,17,255	0/0:49,0:26:42.07:0,42,573	0/0:62,0:24:38.84:0,39,539	0/0:28,0:28:66.21:0,66,1072	0/0:22,0:22:60.19:0,60,969	0/0:39,0:39:99:0,105,1714	1/1:14,18:32:54.16:660,54,0	0/0:44,0:44:99:0,105,1636	0/0:39,0:39:98.37:0,98,1600	0/0:27,0:27:69.24:0,69,1133	0/0:7,0:48:99:0,117,1032	0/0:41,1:42:82.55:0,83,1899	0/0:46,0:46:99:0,117,1915	0/0:42,1:44:73.04:0,73,1844	0/0:42,0:42:99:0,114,1834	0/0:41,0:42:95.56:0,96,1584	0/0:24,0:24:57.06:0,57,846	1/1:15,12:27:44.96:531,45,0	1/1:4,7:11:18.04:225,18,0	1/1:19,91:108:99:1354,111,0	0/0:38,0:38:99:0,108,1770	0/0:4,0:29:63.04:0,63,599	0/0:13,0:78:99:0,171,1573	1/1:8,20:28:27.01:311,27,0	1/1:7,23:29:75.24:942,75,0	1/1:7,23:30:69.22:866,69,0	1/1:2,5:7:15.05:189,15,0
chr10	39584558	.	G	GT	10658.05	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-8.028;DP=745;FS=30.120;HRun=6;HaplotypeScore=76.7892;InbreedingCoeff=0.9986;MQ=70.62;MQ0=0;MQRankSum=-3.163;QD=31.16;ReadPosRankSum=0.106;VQSLOD=2.7618;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,32:35:81.26:1019,81,0	1/1:1,6:7:18.06:226,18,0	0/0:23,0:23:61.92:0,62,603	0/0:16,0:16:38.55:0,39,360	0/0:28,0:28:75.10:0,75,742	0/0:13,0:13:33.07:0,33,337	0/0:24,0:24:66.15:0,66,673	1/1:5,28:34:75.18:906,75,0	0/0:30,0:30:90.20:0,90,918	1/1:4,33:37:96.30:1195,96,0	1/1:2,16:18:48.11:581,48,0	0/0:34,0:34:96.21:0,96,979	0/0:30,0:30:87.17:0,87,879	0/0:44,0:44:99:0,123,1250	0/0:40,0:40:99:0,117,1191	0/0:23,0:23:66.11:0,66,658	0/0:23,0:23:66.15:0,66,673	1/1:1,18:19:48.12:587,48,0	1/1:4,18:22:54.14:662,54,0	1/1:3,15:18:45.14:566,45,0	1/1:12,38:50:99:1573,129,0	0/0:27,0:27:63.11:0,63,629	0/0:21,0:21:60.13:0,60,611	0/0:27,0:27:69.15:0,69,699	1/1:2,18:20:48.15:604,48,0	1/1:3,34:37:99:1229,99,0	1/1:0,36:36:96.08:1207,96,0	1/1:0,9:9:24.08:302,24,0
chr10	39585441	.	G	GA	3095	PASS	AB=0.734;AC=15;AF=0.268;AN=56;BaseQRankSum=-0.004;DP=516;FS=6.049;HRun=9;HaplotypeScore=64.8065;InbreedingCoeff=0.7285;MQ=65.60;MQ0=11;MQRankSum=0.454;QD=19.84;ReadPosRankSum=-1.243;VQSLOD=3.6586;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:32.98:0,33,286	0/0:5,0:5:15:0,15,130	0/0:58,0:19:26.77:0,27,202	0/0:52,0:18:18.30:0,18,133	0/0:26,0:26:65.98:0,66,572	0/0:25,0:25:71.98:0,72,625	0/0:13,0:13:29.97:0,30,255	1/1:5,13:18:19.04:420,19,0	0/0:11,0:11:26.95:0,27,224	0/0:11,0:11:20.95:0,21,182	0/0:22,0:22:21.03:0,21,406	0/1:12,1:13:3.23:3,0,196	0/0:5,0:5:14.98:0,15,127	0/0:9,0:9:23.99:0,24,208	0/0:12,0:12:26.98:0,27,234	0/0:10,0:10:29.98:0,30,257	0/0:20,0:20:41.95:0,42,358	0/0:21,0:21:50.98:0,51,442	1/1:3,20:21:60.15:652,60,0	1/1:10,28:38:15.04:836,15,0	1/1:1,3:4:9.02:100,9,0	0/0:12,0:12:29.99:0,30,260	0/0:23,0:23:62.98:0,63,546	0/0:7,0:7:17.99:0,18,156	0/1:5,4:9:27.04:115,0,27	0/1:7,17:25:18.20:476,0,18	1/1:4,12:14:36.06:383,36,0	1/1:0,9:9:27.07:299,27,0
chr10	39586260	.	ATAAT	A	7727.70	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=12.617;DP=348;FS=5.300;HRun=0;HaplotypeScore=82.4103;InbreedingCoeff=0.9383;MQ=56.22;MQ0=1;MQRankSum=-8.858;QD=37.70;ReadPosRankSum=0.024;VQSLOD=4.6401;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,0:14:21.02:244,21,0	1/1:0,0:10:27.04:311,27,0	0/0:7,0:6:18.05:0,18,393	0/0:6,0:4:12.01:0,12,215	0/0:13,0:13:39.13:0,39,997	0/0:16,0:16:48.16:0,48,1213	0/0:10,0:9:7.24:0,7,549	1/1:0,27:26:72.16:1166,72,0	0/0:10,0:10:27.09:0,27,652	1/1:0,0:21:57.14:686,57,0	1/1:0,0:25:66.12:778,66,0	0/0:10,0:10:30.09:0,30,688	0/0:6,0:6:18.06:0,18,493	0/0:8,0:8:24.08:0,24,612	0/0:9,0:9:27.08:0,27,612	0/0:8,0:8:24.08:0,24,659	0/0:17,0:17:32.14:0,32,1160	1/1:1,0:7:5.99:60,6,0	1/1:0,12:12:36.06:611,36,0	1/1:0,16:16:45.04:790,45,0	1/1:0,6:6:15.05:269,15,0	0/0:7,0:7:21.06:0,21,437	0/0:13,0:13:39.10:0,39,820	0/0:1,0:1:3.01:0,3,83	1/1:0,16:16:33.11:689,33,0	1/1:0,19:20:54.17:1000,54,0	1/1:0,23:23:36.12:748,36,0	1/1:0,8:8:18.06:377,18,0
chr10	39586419	.	AACACACACACACACACACAC	A	6150.21	PASS	AB=0.879;AC=21;AF=0.389;AN=54;BaseQRankSum=8.596;DP=442;FS=3.659;HRun=0;HaplotypeScore=229.1291;InbreedingCoeff=0.5987;MQ=62.30;MQ0=19;MQRankSum=-6.569;QD=31.22;ReadPosRankSum=-1.011;VQSLOD=3.7302;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:22,1:24:99:148,0,153	1/1:4,2:8:15.05:639,15,0	./.	0/0:31,0:17:3.01:0,3,36	0/0:13,0:13:21.07:0,21,1395	0/0:7,0:9:12.04:0,12,900	0/0:25,0:24:28.28:0,28,1504	1/1:25,0:24:1.81:5,2,0	0/0:6,0:11:9.03:0,9,649	1/1:15,5:20:18.05:899,18,0	0/1:11,2:13:24.45:348,0,24	0/0:11,0:11:30.10:0,30,1672	0/0:9,0:15:24.08:0,24,1239	0/0:9,0:9:12.04:0,12,791	0/0:11,0:12:24.08:0,24,1545	0/0:7,0:7:15.05:0,15,973	0/0:24,0:25:53.21:0,53,3388	1/1:8,1:9:3:160,3,0	1/1:12,1:12:5.98:181,6,0	0/1:13,3:15:8.78:605,0,9	0/0:16,0:15:6:0,6,173	0/0:13,0:12:18.06:0,18,1251	0/0:2,0:4:3.01:0,3,224	0/0:12,0:14:24.08:0,24,1534	1/1:14,7:21:30.10:1382,30,0	1/1:13,3:16:9.03:480,9,0	1/1:15,5:18:21.05:873,21,0	1/1:9,2:11:12.04:429,12,0
chr10	39586473	.	TAAG	T	10975.92	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=10.555;DP=465;FS=3.117;HRun=0;HaplotypeScore=112.6530;InbreedingCoeff=0.9968;MQ=71.57;MQ0=6;MQRankSum=-11.074;QD=52.02;ReadPosRankSum=0.902;VQSLOD=7.1780;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,26:26:69.24:1269,69,0	1/1:0,14:14:42.14:782,42,0	0/0:26,0:21:58.57:0,59,1196	0/0:31,0:21:59.55:0,60,1103	0/0:12,0:12:36.12:0,36,867	0/0:16,0:16:48.15:0,48,1082	0/0:12,0:12:33.11:0,33,754	1/1:0,27:27:81.28:1493,81,0	0/0:17,0:17:48.16:0,48,1126	1/1:0,19:19:54.19:1003,54,0	1/1:1,10:11:33.11:607,33,0	0/0:11,0:11:33.11:0,33,788	0/0:20,0:20:54.19:0,54,1281	0/0:10,0:10:21.07:0,21,472	0/0:15,0:15:45.15:0,45,1065	0/0:15,0:15:45.15:0,45,1083	0/0:33,0:33:93.32:0,93,2226	1/1:0,8:8:24.08:446,24,0	1/1:0,20:19:54.19:994,54,0	1/1:0,11:11:33.11:599,33,0	1/1:0,17:17:45:762,45,0	0/0:7,0:7:21.07:0,21,502	0/0:7,0:7:21.03:0,21,445	0/0:21,0:21:60.21:0,60,1419	1/1:0,14:14:42.14:782,42,0	1/1:0,19:19:54.16:953,54,0	1/1:0,19:19:51.17:950,51,0	1/1:0,6:6:18.06:335,18,0
chr10	39586738	.	C	CT	4187.69	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=4.698;DP=577;FS=2.325;HRun=4;HaplotypeScore=82.4325;InbreedingCoeff=0.9994;MQ=71.87;MQ0=2;MQRankSum=-0.757;QD=37.39;ReadPosRankSum=0.817;VQSLOD=3.3374;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,40:42:99:1641,120,0	1/1:0,11:11:33.11:451,33,0	0/0:16,0:16:35.28:0,35,406	0/0:15,0:13:27.07:0,27,300	0/0:20,0:20:57.16:0,57,646	0/0:18,0:18:54.15:0,54,612	0/0:14,0:14:39.11:0,39,442	0/0:36,0:36:90.24:0,90,1005	0/0:13,0:13:39.11:0,39,442	1/1:4,19:23:60.14:783,60,0	1/1:1,19:20:51.17:697,51,0	0/0:23,0:23:60.17:0,60,680	0/0:21,0:21:63.18:0,63,715	0/0:18,0:18:51.14:0,51,570	0/0:19,0:19:51.13:0,51,568	0/0:24,0:24:66.17:0,66,739	0/0:14,0:14:39.11:0,39,442	1/1:1,15:16:45.15:615,45,0	0/0:17,0:17:48.14:0,48,545	0/0:32,0:32:96.26:0,96,1078	0/0:25,0:25:57.65:0,58,676	0/0:14,0:14:39.11:0,39,442	0/0:11,0:11:30.04:0,30,326	0/0:16,0:15:45.13:0,45,510	0/0:27,0:27:81.23:0,81,918	0/0:27,1:28:37.17:0,37,809	0/0:21,0:21:63.18:0,63,713	0/0:23,0:23:60.17:0,60,676
chr10	39586905	.	CT	C	7070.47	PASS	AB=1.000;AC=27;AF=0.482;AN=56;BaseQRankSum=15.022;DP=662;FS=4.599;HRun=8;HaplotypeScore=72.0179;InbreedingCoeff=0.9284;MQ=74.80;MQ0=1;MQRankSum=-1.217;QD=21.76;ReadPosRankSum=0.951;VQSLOD=5.3813;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,28:31:66.10:637,66,0	1/1:1,10:11:27.04:261,27,0	0/0:27,1:27:18.07:0,18,488	0/1:19,0:20:15.52:16,0,330	0/0:34,0:34:84.26:0,84,1014	0/0:28,0:28:72.21:0,72,854	0/0:21,0:21:51.16:0,51,616	1/1:7,25:32:75.07:711,75,0	0/0:17,0:17:48.15:0,48,579	1/1:2,30:32:87.10:827,87,0	1/1:2,26:28:78.12:753,78,0	0/0:18,0:18:54.15:0,54,641	0/0:19,0:19:48.15:0,48,580	0/0:21,1:22:31.21:0,31,659	0/0:30,0:29:81.25:0,81,975	0/0:19,0:19:51.14:0,51,604	0/0:27,0:27:75.23:0,75,905	1/1:2,9:11:21.03:202,21,0	1/1:3,21:24:63.06:599,63,0	1/1:1,17:18:45.07:434,45,0	1/1:3,14:17:30.93:291,31,0	0/0:18,0:18:48.06:0,48,561	0/0:20,0:20:54.17:0,54,652	0/0:34,0:35:84.27:0,84,1144	1/1:0,19:19:48.08:464,48,0	1/1:2,35:37:99:1007,105,0	1/1:2,28:30:63.07:608,63,0	1/1:2,13:15:27.04:261,27,0
chr10	39587288	.	CTG	C	14766.52	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=20.555;DP=759;FS=4.338;HRun=0;HaplotypeScore=114.6073;InbreedingCoeff=0.9988;MQ=77.24;MQ0=0;MQRankSum=-2.395;QD=40.02;ReadPosRankSum=2.334;VQSLOD=6.7521;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,36:36:99:1417,99,0	1/1:0,16:16:45.15:645,45,0	0/0:31,0:31:78.28:0,78,1421	0/0:29,0:28:81.28:0,81,1463	0/0:43,0:43:99:0,126,2268	0/0:34,0:34:99:0,102,1775	0/0:22,0:22:66.23:0,66,1197	1/1:1,38:39:99:1582,114,0	0/0:22,0:22:63.22:0,63,1112	1/1:2,42:44:99:1805,126,0	1/1:2,16:19:51.17:727,51,0	0/0:24,0:24:69.24:0,69,1265	0/0:24,0:24:72.25:0,72,1319	0/0:24,0:24:69.24:0,69,1250	0/0:33,0:33:96.33:0,96,1718	0/0:20,0:20:60.21:0,60,1100	0/0:21,0:21:60.21:0,60,1100	1/1:0,11:11:30.10:430,30,0	1/1:1,26:27:72.20:988,72,0	1/1:1,28:30:84.28:1203,84,0	1/1:0,35:35:99:1462,102,0	0/0:16,0:16:48.16:0,48,866	0/0:22,0:22:60.19:0,60,1067	0/0:25,0:25:71.93:0,72,1318	1/1:0,28:28:78.26:1118,78,0	1/1:2,36:38:99:1544,108,0	1/1:1,39:40:99:1589,111,0	1/1:0,6:6:18.06:258,18,0
chr10	39587885	.	CACAA	C	5454.57	PASS	AB=0.600;AC=14;AF=0.250;AN=56;BaseQRankSum=11.481;DP=777;FS=1.231;HRun=0;HaplotypeScore=137.2290;InbreedingCoeff=0.8737;MQ=64.96;MQ0=4;MQRankSum=0.738;QD=27.69;ReadPosRankSum=0.949;VQSLOD=4.8356;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:93.25:0,93,2002	0/0:11,0:11:27.04:0,27,560	0/0:24,0:14:9.81:0,10,389	0/0:32,0:19:14.20:0,14,598	0/0:38,0:38:90.26:0,90,1860	0/0:22,0:22:54.19:0,54,1303	0/0:28,0:28:66.23:0,66,1508	1/1:18,19:37:55.68:830,56,0	0/0:32,0:32:81.26:0,81,1870	0/0:44,0:44:99:0,102,2320	0/0:19,0:19:51.17:0,51,1155	0/0:8,0:25:30.10:0,30,528	0/0:31,0:31:81.24:0,81,1794	0/0:35,0:35:93.28:0,93,2051	0/0:39,0:38:99:0,102,2219	0/0:29,0:29:63.21:0,63,1478	0/0:29,0:29:69.17:0,69,1480	0/0:18,0:18:54.13:0,54,1248	1/1:5,14:19:38.69:645,39,0	1/1:5,24:29:69.17:1099,69,0	1/1:10,25:35:51.17:846,51,0	0/0:23,0:23:42.10:0,42,735	0/0:5,0:25:48.08:0,48,828	0/0:7,0:32:63.19:0,63,1054	1/1:8,12:20:18.06:298,18,0	0/1:5,17:22:0.75:755,0,1	1/1:5,23:28:50.96:845,51,0	0/1:3,4:5:3.43:137,0,3
chr10	39588765	.	T	TC	2529.77	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-9.205;DP=448;FS=9.899;HRun=7;HaplotypeScore=53.0646;InbreedingCoeff=0.9386;MQ=60.21;MQ0=0;MQRankSum=-0.831;QD=23.21;ReadPosRankSum=-1.780;VQSLOD=2.5229;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:24:72.10:0,72,689	0/0:6,0:6:9.01:0,9,87	0/0:10,0:7:12.02:0,12,114	0/0:14,1:11:5.20:0,5,201	0/0:12,0:12:18.02:0,18,174	0/0:15,0:15:42.05:0,42,400	0/0:27,0:27:66.10:0,66,637	1/1:4,5:9:15.03:170,15,0	0/0:19,0:19:54.08:0,54,521	0/0:24,0:24:57.06:0,57,543	0/0:15,0:15:33.05:0,33,318	0/0:15,0:15:45.07:0,45,435	0/0:10,0:11:30.03:0,30,283	0/0:9,0:9:24.03:0,24,230	0/0:18,0:18:39.05:0,39,376	0/0:16,0:15:36.05:0,36,348	0/0:28,0:28:78.12:0,78,753	0/0:23,0:23:57.05:0,57,543	1/1:0,7:7:21.06:254,21,0	1/1:3,12:15:30.01:330,30,0	1/1:1,28:29:68.88:808,69,0	0/0:18,0:18:45.07:0,45,435	0/0:13,0:13:36.02:0,36,337	0/0:20,0:20:51.08:0,51,492	1/1:2,12:14:27.08:326,27,0	1/1:3,11:14:33.08:385,33,0	1/1:4,14:17:32.08:429,32,0	1/1:3,0:3:5.03:30,5,0
chr10	39592059	.	G	GTGTCTCCGCTAGGTCA	54225.73	PASS	AB=0.939;AC=39;AF=0.696;AN=56;BaseQRankSum=-2.368;DP=822;FS=5.030;HRun=0;HaplotypeScore=286.2688;InbreedingCoeff=0.9125;MQ=65.77;MQ0=0;MQRankSum=-17.937;QD=97.35;ReadPosRankSum=-3.099;VQSLOD=3.7948;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:46:51.17:2838,51,0	1/1:4,0:15:33.11:2044,33,0	0/0:30,0:30:75.24:0,75,2506	0/0:22,0:21:51.87:0,52,1833	0/0:38,0:38:99:0,102,4203	1/1:16,0:18:45.14:2291,45,0	1/1:11,2:29:30.10:2066,30,0	1/1:39,0:34:96.27:4132,96,0	1/1:8,10:26:38.92:2676,39,0	1/1:13,0:38:99:5898,108,0	1/1:8,0:30:36.12:2434,36,0	1/1:4,12:35:44.94:3200,45,0	0/0:36,0:36:99:0,105,4603	0/0:31,0:31:84.21:0,84,3096	0/0:36,0:36:99:0,105,4212	0/1:29,1:31:99:145,0,3696	0/0:42,0:42:99:0,111,4743	1/1:7,0:21:33.58:2213,34,0	1/1:11,3:25:69.68:3102,70,0	1/1:8,5:27:38.97:1744,39,0	1/1:17,6:39:33.11:2065,33,0	0/0:30,0:30:84.27:0,84,3753	1/1:5,7:23:24.08:1797,24,0	1/1:13,2:25:33.11:1863,33,0	1/1:6,10:19:39.13:2693,39,0	1/1:12,12:38:99:5832,99,0	1/1:18,5:24:72.22:4115,72,0	1/1:4,2:6:15.05:1077,15,0
chr10	39593082	.	TCCA	T	108.89	PASS	AB=0.848;AC=3;AF=0.054;AN=56;BaseQRankSum=0.077;DP=684;FS=11.777;HRun=0;HaplotypeScore=149.1282;InbreedingCoeff=-0.0647;MQ=74.73;MQ0=23;MQRankSum=-4.546;QD=2.42;ReadPosRankSum=-3.757;VQSLOD=0.8778;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:24:45.14:0,45,987	0/1:9,0:9:58.31:58,0,353	0/0:72,0:31:86.43:0,86,1597	0/0:80,0:39:99:0,103,2176	0/0:21,0:20:51.17:0,51,1240	0/0:19,3:21:51.17:0,51,1068	0/0:33,1:34:87.10:0,87,1943	0/0:18,0:17:46.59:0,47,1180	0/0:19,0:19:44.18:0,44,916	0/1:15,3:18:99:113,0,960	0/1:9,8:17:37.64:38,0,349	0/0:18,0:19:48.12:0,48,1039	0/0:20,0:20:51.17:0,51,1156	0/0:19,0:19:36.03:0,36,812	0/0:18,0:18:51.17:0,51,1172	0/0:17,0:17:48.16:0,48,1159	0/0:41,1:42:99:0,102,2672	0/0:18,1:19:2.15:0,2,1161	0/0:12,0:12:35.97:0,36,697	0/0:19,0:19:56.98:0,57,1249	0/0:57,0:56:99:0,132,2897	0/0:11,0:11:30.10:0,30,671	0/0:10,0:10:27.08:0,27,627	0/0:34,0:34:96.32:0,96,1924	0/0:10,0:10:30.08:0,30,641	0/0:21,0:21:59.40:0,59,1365	0/0:11,0:11:24.08:0,24,566	0/0:6,0:6:18.06:0,18,443
chr10	39593085	.	A	AGT	2469.28	PASS	AB=0.821;AC=32;AF=0.593;AN=54;BaseQRankSum=1.276;DP=736;FS=1.345;HRun=0;HaplotypeScore=148.1308;InbreedingCoeff=0.2899;MQ=70.12;MQ0=25;MQRankSum=0.067;QD=4.74;ReadPosRankSum=0.512;VQSLOD=2.7760;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:26,1:34:2.64:26,3,0	1/1:8,0:11:8.74:63,9,0	./.	0/1:77,0:36:0:0,0,0	0/0:22,0:21:6.27:0,6,152	1/1:21,1:21:21.02:224,21,0	1/1:35,0:35:21.47:214,21,0	0/0:22,0:20:2.84:0,3,32	1/1:14,0:21:17.99:156,18,0	1/1:21,0:20:8.12:53,8,0	1/1:17,0:17:0.48:2,0,0	0/1:13,5:20:61.34:116,0,61	1/1:15,2:24:12.01:124,12,0	1/1:13,1:26:1.27:86,1,0	0/0:17,0:19:17.88:0,18,177	0/0:17,0:18:21.01:0,21,228	0/0:41,0:44:52.42:0,52,498	1/1:20,0:21:11.75:106,12,0	0/1:13,0:12:0:0,0,0	0/1:13,5:19:44.18:202,0,44	0/1:44,14:61:72.92:336,0,73	0/0:12,0:14:14.70:0,15,126	1/1:8,4:12:6.02:76,6,0	0/1:20,13:35:8.39:565,0,8	0/1:7,2:11:74.23:74,0,83	0/1:19,5:25:46.70:161,0,47	1/1:7,4:11:5.38:52,5,0	0/0:6,0:6:3.01:0,3,33
chr10	39593491	.	A	ACTCTCTCTCTCTCT	4542.87	PASS	AB=1.000;AC=34;AF=0.607;AN=56;BaseQRankSum=-0.245;DP=580;FS=13.815;HRun=0;HaplotypeScore=238.6428;InbreedingCoeff=0.3802;MQ=56.66;MQ0=26;MQRankSum=-4.072;QD=11.08;ReadPosRankSum=-2.467;VQSLOD=2.0508;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:19,6:24:3.01:93,3,0	1/1:12,0:12:11.07:342,11,0	0/0:33,0:10:6.02:0,6,234	0/0:42,0:21:18.70:0,19,412	0/0:17,0:17:18.06:0,18,558	1/1:16,0:13:11.52:137,12,0	1/1:23,0:21:5.78:102,6,0	1/1:42,0:42:33.26:396,33,0	1/1:18,0:17:5.60:152,6,0	1/1:20,0:25:24.08:669,24,0	1/1:15,0:14:2.99:25,3,0	1/1:11,0:11:13.75:208,14,0	0/1:27,0:26:2.95:681,0,3	1/1:18,0:18:12.04:376,12,0	0/0:13,0:13:27.09:0,27,1046	0/0:19,0:19:30.59:0,31,883	0/1:27,0:27:18.52:19,0,1046	0/1:12,0:10:93.85:328,0,94	1/1:16,0:16:6.83:90,7,0	0/0:23,0:23:20.67:0,21,383	1/1:14,0:11:3.27:88,3,0	0/0:20,0:19:30.09:0,30,879	1/1:23,0:22:12.01:316,12,0	1/1:16,0:17:3.48:44,3,0	0/1:10,0:10:24.04:24,0,81	0/1:30,0:29:99:329,0,112	0/1:28,0:27:99:126,0,170	0/0:3,0:2:2.37:0,2,8
chr10	39593519	.	TCACACACACA	T	1059.67	PASS	AB=0.805;AC=16;AF=0.348;AN=46;BaseQRankSum=6.675;DP=514;FS=0.000;HRun=0;HaplotypeScore=181.9386;InbreedingCoeff=0.4611;MQ=42.38;MQ0=29;MQRankSum=-3.842;QD=5.58;ReadPosRankSum=-0.539;VQSLOD=2.0791;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:24:6.01:0,6,61	0/0:9,0:9:5.96:0,6,48	./.	./.	0/1:12,0:19:1.60:2,0,128	0/0:14,0:12:8.97:0,9,181	0/1:23,0:20:2.36:2,0,14	0/0:22,0:22:3.01:0,3,54	1/1:14,0:13:0.47:1,0,0	0/0:23,0:19:18.62:0,19,288	0/0:14,0:12:9.03:0,9,148	0/1:11,3:14:11.13:81,0,11	1/1:19,1:23:11.06:297,11,0	1/1:12,0:17:6.02:155,6,0	0/0:19,0:19:30.10:0,30,647	0/0:22,0:23:33.11:0,33,1371	0/0:24,0:25:24.08:0,24,685	0/0:16,0:14:2.77:0,3,224	0/0:11,0:11:3.90:0,4,119	1/1:14,0:16:2.07:16,2,0	./.	0/0:20,0:19:27.09:0,27,963	0/0:18,6:24:0.94:0,1,1	./.	0/1:6,0:12:0:0,0,0	1/1:23,1:23:6.02:161,6,0	1/1:17,4:26:16.94:482,17,0	./.
chr10	39595957	.	TACTACTACTAC	T	1046.91	PASS	AB=0.714;AC=7;AF=0.135;AN=52;BaseQRankSum=3.194;DP=323;FS=0.864;HRun=0;HaplotypeScore=115.6527;InbreedingCoeff=0.6260;MQ=52.94;MQ0=6;MQRankSum=-3.900;QD=22.27;ReadPosRankSum=0.491;VQSLOD=2.6825;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:27.09:0,27,1152	0/0:11,0:11:6.02:0,6,301	./.	0/0:10,0:2:2.84:0,3,14	0/0:13,0:12:32.13:0,32,1195	0/1:9,6:15:11.52:642,0,12	./.	0/0:31,0:23:59.81:0,60,736	1/1:5,0:5:14.27:170,14,0	0/0:12,0:12:33.11:0,33,1303	0/0:23,0:23:47.45:0,47,1667	0/0:3,0:3:9.03:0,9,533	1/1:16,0:16:12.04:253,12,0	1/1:11,0:11:6.02:115,6,0	0/0:13,0:13:33.11:0,33,1496	0/0:9,0:9:27.09:0,27,1336	0/0:26,0:26:78.13:0,78,2738	0/0:14,0:14:6.02:0,6,241	0/0:5,0:5:15.05:0,15,437	0/0:7,0:7:21.01:0,21,333	0/0:6,0:6:17.98:0,18,350	0/0:2,0:2:3.01:0,3,136	0/0:9,0:9:27.09:0,27,1188	0/0:5,0:5:15.05:0,15,703	0/0:12,0:12:36.03:0,36,687	0/0:7,0:7:21.03:0,21,373	0/0:11,0:11:33.04:0,33,750	0/0:13,0:12:11.50:0,11,394
chr10	39595962	.	C	CTATTATTATTATTAT	2518.11	PASS	AB=1.000;AC=18;AF=0.346;AN=52;BaseQRankSum=4.581;DP=321;FS=11.677;HRun=0;HaplotypeScore=127.2882;InbreedingCoeff=0.3215;MQ=53.27;MQ0=6;MQRankSum=-4.500;QD=18.65;ReadPosRankSum=-5.725;VQSLOD=-0.7077;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:21.02:0,21,345	0/0:11,0:11:5.78:0,6,74	./.	0/0:8,0:2:3.01:0,3,36	0/0:13,0:12:31.77:0,32,977	0/1:14,0:14:99:143,0,776	./.	0/1:30,0:22:29.64:675,0,30	0/1:4,0:4:35.36:71,0,35	0/0:12,0:12:33.10:0,33,592	0/0:22,0:22:26.37:0,26,449	0/0:4,0:4:9.03:0,9,375	0/1:16,0:16:35.69:36,0,199	0/1:10,0:10:33.83:34,0,99	0/0:13,0:13:33.10:0,33,1087	0/0:9,0:9:27.09:0,27,905	0/0:27,0:27:78.23:0,78,2665	0/0:16,0:16:6.02:0,6,72	1/1:4,0:4:6.01:82,6,0	1/1:7,0:7:15.04:318,15,0	1/1:4,0:4:3.85:11,4,0	0/0:1,0:1:3.01:0,3,50	0/0:10,0:10:27.09:0,27,652	0/0:5,0:5:15.05:0,15,327	1/1:12,0:12:24.07:574,24,0	0/1:7,0:7:20.58:222,0,21	1/1:11,0:11:21.98:374,22,0	1/1:7,1:15:3.48:151,3,0
chr10	39595963	.	T	TACTACC	1816.65	PASS	AB=1.000;AC=11;AF=0.220;AN=50;BaseQRankSum=-4.338;DP=323;FS=15.179;HRun=0;HaplotypeScore=92.2715;InbreedingCoeff=0.7011;MQ=53.58;MQ0=6;MQRankSum=0.048;QD=17.30;ReadPosRankSum=2.386;VQSLOD=1.9712;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,22:28:2.89:306,3,0	1/1:0,11:13:5.90:209,6,0	./.	./.	0/0:13,0:12:33.02:0,33,493	0/0:14,0:14:36.07:0,36,499	./.	0/0:30,0:22:44.66:0,45,331	0/0:4,0:4:9:0,9,109	1/1:2,10:14:33.02:545,33,0	1/1:0,21:22:26.35:694,26,0	0/0:4,0:4:12.03:0,12,231	0/0:16,0:16:12.04:0,12,166	0/0:10,0:10:6.02:0,6,80	0/0:13,0:13:33.06:0,33,581	0/0:9,0:9:27.08:0,27,553	0/0:27,0:27:81.08:0,81,1270	1/1:1,15:17:6.02:208,6,0	0/0:4,0:4:9.03:0,9,187	0/0:7,0:7:11.93:0,12,157	0/0:4,0:4:6.64:0,7,77	0/0:1,0:1:3.01:0,3,68	0/0:10,0:10:30.06:0,30,547	0/0:5,0:5:15.03:0,15,275	0/0:11,0:11:29.89:0,30,386	0/0:8,0:8:18:0,18,262	0/0:11,0:11:23.94:0,24,347	0/1:11,0:10:2.97:3,0,123
chr10	39597615	.	GTGTGACACTC	G	5328.01	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=12.333;DP=674;FS=2.972;HRun=0;HaplotypeScore=198.9457;InbreedingCoeff=0.9919;MQ=84.30;MQ0=0;MQRankSum=-10.677;QD=57.91;ReadPosRankSum=-2.445;VQSLOD=4.4635;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,32:42:84.24:2456,84,0	1/1:1,10:11:27.06:787,27,0	0/0:22,0:22:45.15:0,45,1949	0/0:30,0:28:47.34:0,47,2150	0/0:24,0:24:63.22:0,63,3203	0/0:32,0:32:93.30:0,93,4510	0/0:29,0:29:78.27:0,78,3933	0/0:39,0:39:99:0,99,4888	0/0:23,0:23:66.21:0,66,3241	1/1:4,10:14:30.09:856,30,0	1/1:4,11:15:33.03:845,33,0	0/0:30,0:30:81.28:0,81,4082	0/0:23,0:23:66.23:0,66,3323	0/0:22,0:22:60.21:0,60,2933	0/0:31,0:31:87.30:0,87,4408	0/0:25,0:25:72.25:0,72,3681	0/0:34,0:34:99:0,99,4950	1/1:4,6:10:12.04:383,12,0	0/0:22,0:22:56.24:0,56,2752	0/0:11,0:11:27.09:0,27,1265	0/0:56,0:56:99:0,160,7861	0/0:11,0:11:30.10:0,30,1541	0/0:12,0:12:33.11:0,33,1652	0/0:20,0:20:48.16:0,48,2399	0/0:21,0:21:60.20:0,60,2890	0/0:33,0:33:87.30:0,87,4345	0/0:20,0:20:51.16:0,51,2491	0/0:12,0:12:33.11:0,33,1714
chr10	39597898	.	TTCTTC	T	9235.29	PASS	AB=0.984;AC=27;AF=0.482;AN=56;BaseQRankSum=3.883;DP=643;FS=8.918;HRun=0;HaplotypeScore=118.8760;InbreedingCoeff=0.8946;MQ=60.79;MQ0=16;MQRankSum=1.078;QD=25.94;ReadPosRankSum=-0.060;VQSLOD=3.6306;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,21:27:30.10:567,30,0	1/1:2,8:10:18.06:340,18,0	0/0:47,0:14:6.49:0,6,135	0/1:60,0:19:24.43:24,0,340	0/0:27,0:27:72.25:0,72,1948	0/0:3,0:22:36.12:0,36,761	0/0:7,0:15:15.04:0,15,232	1/1:12,20:31:57.08:745,57,0	0/0:6,0:17:21.07:0,21,460	1/1:8,27:35:84.21:1395,84,0	1/1:4,16:20:45.04:717,45,0	0/0:3,0:13:24.08:0,24,509	0/0:4,0:20:15.04:0,15,283	0/0:4,0:16:12.04:0,12,262	0/0:13,0:13:39.13:0,39,1116	0/0:11,0:11:27.09:0,27,693	0/0:29,0:29:75.22:0,75,1945	1/1:3,16:19:30.10:544,30,0	1/1:9,13:22:36.08:564,36,0	1/1:4,22:26:57.11:1001,57,0	1/1:3,10:13:15.05:284,15,0	0/0:19,0:19:48.16:0,48,1351	0/0:5,0:21:36.31:0,36,696	0/0:5,0:17:27.05:0,27,547	1/1:4,23:27:45.15:848,45,0	1/1:6,22:28:66.11:1072,66,0	1/1:3,26:29:51.17:964,51,0	1/1:3,4:7:9.03:169,9,0
chr10	39598525	.	G	GC	11035.78	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=2.970;DP=578;FS=35.172;HRun=0;HaplotypeScore=78.3297;InbreedingCoeff=0.9976;MQ=85.59;MQ0=0;MQRankSum=-3.902;QD=40.57;ReadPosRankSum=1.903;VQSLOD=2.5312;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,41:43:99:1627,102,0	1/1:0,5:5:15.05:240,15,0	0/0:21,0:21:62.75:0,63,774	0/0:28,0:29:79.13:0,79,1007	0/0:16,0:16:48.13:0,48,634	0/0:12,0:12:27.09:0,27,378	0/0:17,0:15:45.12:0,45,608	1/1:2,21:23:63.17:978,63,0	0/0:20,0:18:51.16:0,51,695	1/1:0,16:16:45.13:689,45,0	1/1:2,12:14:36.12:570,36,0	0/0:16,0:16:45.12:0,45,592	0/0:18,0:16:45.09:0,45,589	0/0:16,0:16:45.07:0,45,585	0/0:21,0:20:54.17:0,54,725	0/0:27,0:27:78.22:0,78,1068	0/0:23,0:23:69.20:0,69,944	1/1:0,19:19:57.19:911,57,0	1/1:2,17:19:41.64:764,42,0	1/1:1,17:18:45.15:719,45,0	1/1:0,35:35:81.28:1293,81,0	0/0:17,0:17:48.16:0,48,668	0/0:25,0:25:75.17:0,75,997	0/0:28,0:28:75.23:0,75,1029	1/1:0,16:16:39.13:623,39,0	1/1:3,19:22:54.18:853,54,0	1/1:1,21:22:60.20:955,60,0	1/1:2,18:20:51.17:815,51,0
chr10	39598620	.	CTCTCTG	C	2505.23	PASS	AB=0.901;AC=15;AF=0.278;AN=54;BaseQRankSum=5.065;DP=555;FS=6.053;HRun=0;HaplotypeScore=148.6690;InbreedingCoeff=0.4962;MQ=45.69;MQ0=16;MQRankSum=-7.073;QD=13.33;ReadPosRankSum=-0.964;VQSLOD=2.5237;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:22:8.25:0,8,70	0/0:5,0:5:3.01:0,3,34	0/0:28,0:7:9.50:0,9,117	0/0:34,0:8:6.01:0,6,82	0/0:20,0:20:26.92:0,27,484	0/0:20,0:19:8.86:0,9,139	0/0:27,0:25:12.01:0,12,278	1/1:27,0:23:23.71:481,24,0	0/1:26,0:23:6.97:7,0,423	0/1:25,0:25:11.85:12,0,501	0/0:17,0:17:5.37:0,5,62	0/0:12,0:12:26.99:0,27,488	0/0:21,0:17:33.77:0,34,434	0/0:26,0:26:41.78:0,42,688	0/0:24,0:22:11.94:0,12,191	0/0:12,0:10:26.54:0,27,320	0/0:21,0:20:43.67:0,44,638	0/1:8,0:8:4.98:5,0,34	1/1:21,0:18:8.81:158,9,0	1/1:8,5:12:14.75:133,15,0	./.	0/0:11,0:11:11.72:0,12,172	0/0:21,0:20:21.07:0,21,477	0/0:28,0:27:17.93:0,18,327	1/1:11,4:14:20.89:197,21,0	0/1:16,6:21:8.06:791,0,8	0/1:11,7:15:6.11:268,0,6	1/1:4,9:12:33.09:627,33,0
chr10	39598626	.	G	GTC	958.86	PASS	AB=0.949;AC=9;AF=0.167;AN=54;BaseQRankSum=4.418;DP=561;FS=2.137;HRun=0;HaplotypeScore=135.4000;InbreedingCoeff=0.2475;MQ=42.28;MQ0=20;MQRankSum=-4.993;QD=7.00;ReadPosRankSum=-0.507;VQSLOD=3.1801;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:21:11.95:0,12,137	0/0:5,0:5:3.01:0,3,41	0/0:28,0:7:14.71:0,15,183	0/0:39,0:9:11.46:0,11,144	0/0:21,0:21:27.07:0,27,369	0/0:20,0:19:9.03:0,9,123	0/0:25,0:23:12.04:0,12,165	0/1:26,9:30:99:498,0,122	0/0:24,0:21:9.58:0,10,501	0/0:26,0:26:31.94:0,32,729	0/0:17,0:16:5.85:0,6,81	0/0:12,0:12:27.07:0,27,352	0/0:19,0:15:35.06:0,35,454	0/0:23,0:23:42.05:0,42,536	0/0:24,0:22:12.03:0,12,164	0/0:12,0:10:27.03:0,27,345	0/0:21,0:20:45.02:0,45,602	0/0:8,0:8:8.96:0,9,95	0/1:18,1:16:84.43:96,0,84	1/1:15,0:14:2.98:53,3,0	./.	0/0:11,0:11:12.02:0,12,163	0/0:21,0:20:21.07:0,21,288	0/0:28,0:26:18.06:0,18,246	1/1:15,0:14:8.97:83,9,0	0/1:23,0:22:47.04:304,0,47	0/1:17,0:13:2.91:11,0,3	0/1:13,0:12:9.50:51,0,10
chr10	39598630	.	C	CTT	1588.07	PASS	AB=0.870;AC=13;AF=0.232;AN=56;BaseQRankSum=6.239;DP=565;FS=6.806;HRun=1;HaplotypeScore=138.1920;InbreedingCoeff=0.5092;MQ=39.55;MQ0=24;MQRankSum=-6.584;QD=10.12;ReadPosRankSum=-1.589;VQSLOD=-0.2729;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:21:9.57:0,10,143	0/0:4,0:4:3.01:0,3,45	0/0:27,0:7:14.72:0,15,228	0/0:40,0:8:20.96:0,21,243	0/0:24,0:24:26.79:0,27,408	0/0:20,0:19:9.03:0,9,135	0/0:25,0:23:11.94:0,12,184	0/1:33,3:32:99:393,0,327	0/0:21,0:18:31.31:0,31,596	0/0:28,0:28:11.99:0,12,758	0/0:15,0:14:0.81:0,1,81	0/0:14,0:12:27.09:0,27,406	0/0:20,0:16:35.48:0,35,514	0/0:23,0:23:42.12:0,42,607	0/0:25,0:23:11.82:0,12,181	0/0:12,0:10:26.82:0,27,377	0/0:21,0:20:51.06:0,51,713	0/0:7,0:7:7.84:0,8,83	0/1:17,2:16:46.59:164,0,47	1/1:14,3:16:18.26:121,18,0	1/1:18,0:17:2.49:6,2,0	0/0:11,0:11:9.69:0,10,175	0/0:21,0:20:21.07:0,21,321	0/0:27,0:25:18.06:0,18,274	1/1:12,0:11:21.79:248,22,0	0/1:18,7:23:86.32:457,0,86	1/1:14,3:13:4.95:131,5,0	1/1:13,0:11:32.17:232,32,0
chr10	39598632	.	GTCTCTTTC	G	1384.83	PASS	AB=0.964;AC=18;AF=0.321;AN=56;BaseQRankSum=5.772;DP=553;FS=0.000;HRun=0;HaplotypeScore=157.4518;InbreedingCoeff=0.3165;MQ=39.18;MQ0=25;MQRankSum=-5.641;QD=6.21;ReadPosRankSum=6.249;VQSLOD=1.5272;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:19,3:21:3.61:11,0,4	1/1:0,3:3:2.94:18,3,0	0/0:28,0:6:15.52:0,16,420	0/0:42,0:8:21.07:0,21,497	0/0:24,0:24:30.22:0,30,334	0/0:20,0:19:9.13:0,9,120	0/0:24,0:22:12.01:0,12,152	0/1:33,0:29:59.95:60,0,243	0/1:21,0:18:47.22:47,0,261	1/1:25,3:28:38.04:715,38,0	0/1:12,3:14:7.16:14,0,7	0/0:14,0:12:28.61:0,29,419	0/0:20,0:16:28.92:0,29,355	0/0:23,0:23:44.29:0,44,542	0/0:26,0:24:10.54:0,11,126	0/0:13,0:11:22.10:0,22,239	0/0:20,0:19:40.39:0,40,457	1/1:2,5:7:6.02:108,6,0	0/1:14,0:11:19.55:20,0,40	0/1:17,0:16:5.48:9,0,5	0/0:16,0:15:3.85:0,4,11	0/0:11,0:11:12.98:0,13,75	0/0:21,0:20:22.58:0,23,284	0/0:28,0:25:18.37:0,18,136	1/1:12,0:11:0.45:20,0,0	0/1:23,0:21:28.47:242,0,28	0/1:16,0:12:2.75:72,0,3	1/1:12,0:11:26.73:218,27,0
chr10	39598636	.	CTT	C	482.25	PASS	AB=0.927;AC=8;AF=0.148;AN=54;BaseQRankSum=2.775;DP=535;FS=4.772;HRun=3;HaplotypeScore=128.9201;InbreedingCoeff=0.4102;MQ=38.42;MQ0=23;MQRankSum=-5.458;QD=4.77;ReadPosRankSum=2.085;VQSLOD=0.1293;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:16,4:18:3.64:11,0,4	./.	0/0:27,0:6:15.05:0,15,289	0/0:40,0:8:21.06:0,21,354	0/0:24,1:25:29.96:0,30,301	0/0:20,0:19:9.13:0,9,119	0/0:23,0:21:12.01:0,12,136	0/0:33,0:29:25.03:0,25,624	0/0:18,0:15:36.91:0,37,409	1/1:23,4:26:55.54:480,56,0	0/0:14,0:13:6.74:0,7,17	0/0:14,0:12:28.45:0,28,415	0/0:20,1:17:26.16:0,26,386	0/0:22,0:22:44.29:0,44,579	0/0:25,0:23:10.54:0,11,110	0/0:13,0:11:21.81:0,22,234	0/0:19,0:19:27:0,27,487	1/1:6,1:7:6.02:73,6,0	0/1:13,0:10:8.61:9,0,49	0/0:17,0:16:7.87:0,8,24	0/0:16,0:15:3.85:0,4,11	0/0:10,0:10:13.40:0,13,76	0/0:20,0:20:22.58:0,23,267	0/0:28,0:25:2.55:0,3,118	0/1:10,1:10:0.41:3,0,0	0/1:22,1:21:36.91:37,0,47	0/0:16,0:12:4.49:0,4,23	0/0:10,0:9:16.91:0,17,55
chr10	39598640	.	CTCTCTG	C	1604.48	PASS	AB=1.000;AC=25;AF=0.658;AN=38;BaseQRankSum=-1.491;DP=553;FS=0.000;HRun=0;HaplotypeScore=145.1181;InbreedingCoeff=0.5259;MQ=37.13;MQ0=29;MQRankSum=3.876;QD=6.24;ReadPosRankSum=2.108;VQSLOD=2.4190;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:23:0.81:2,1,0	./.	0/0:26,0:6:8.62:0,9,102	0/0:38,0:7:20.11:0,20,169	./.	1/1:21,0:20:2.94:18,3,0	./.	0/0:39,0:34:55.90:0,56,496	1/1:19,0:16:27.02:354,27,0	0/1:29,0:28:99:191,0,133	./.	1/1:14,0:12:14.80:121,15,0	1/1:16,5:17:27.06:338,27,0	1/1:21,0:21:26.98:233,27,0	./.	1/1:11,1:10:11.97:181,12,0	1/1:18,1:18:22.14:211,22,0	1/1:6,0:6:5.74:31,6,0	0/0:14,0:11:13.96:0,14,94	1/1:19,0:18:0.47:1,0,0	./.	./.	./.	0/0:27,1:25:3.01:0,3,37	./.	0/1:24,0:22:3.68:4,0,122	0/1:16,0:11:7.05:11,0,7	1/1:11,0:9:15.73:51,16,0
chr10	39598642	.	C	CTG	522.67	PASS	AB=0.933;AC=12;AF=0.261;AN=46;BaseQRankSum=6.066;DP=552;FS=11.108;HRun=0;HaplotypeScore=138.3497;InbreedingCoeff=0.2398;MQ=36.21;MQ0=30;MQRankSum=-5.437;QD=2.72;ReadPosRankSum=2.149;VQSLOD=2.1973;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:26,0:6:14.72:0,15,229	0/0:38,0:7:21.07:0,21,321	0/0:26,0:25:9.02:0,9,115	0/0:22,0:21:6.02:0,6,90	0/0:23,0:20:3.01:0,3,45	0/1:41,0:35:5.21:5,0,541	0/0:18,0:15:30.06:0,30,371	1/1:29,0:28:10.14:275,10,0	./.	0/0:13,0:11:21.07:0,21,316	0/0:19,0:16:27.02:0,27,354	0/0:20,0:20:29.31:0,29,412	0/0:24,0:22:3.01:0,3,45	0/0:12,0:10:15.05:0,15,204	0/0:18,0:15:29.83:0,30,356	1/1:6,0:6:5.83:33,6,0	0/1:15,1:13:20.28:20,0,73	0/1:17,2:20:0:0,0,0	./.	./.	0/0:14,0:14:9:0,9,94	1/1:27,0:24:2.97:20,3,0	0/0:13,0:11:0:0,0,0	0/1:18,4:20:38.24:256,0,38	0/1:15,2:12:15.90:28,0,16	0/1:13,0:11:17.43:17,0,31
chr10	39598644	.	CTG	C	232.07	PASS	AB=0.960;AC=8;AF=0.167;AN=48;BaseQRankSum=2.246;DP=555;FS=2.496;HRun=0;HaplotypeScore=138.7021;InbreedingCoeff=0.1001;MQ=35.89;MQ0=31;MQRankSum=-3.171;QD=1.80;ReadPosRankSum=-0.249;VQSLOD=2.5195;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:21:0.85:2,1,0	./.	0/0:25,0:6:15.05:0,15,252	0/0:38,0:7:21:0,21,340	0/0:24,1:24:6:0,6,71	0/0:23,0:21:5.93:0,6,41	0/0:23,0:20:3:0,3,25	0/0:41,0:35:4.59:0,5,712	0/0:18,0:15:11.21:0,11,104	0/1:23,5:27:6.68:228,0,7	./.	0/0:13,0:11:18.43:0,18,198	0/1:19,2:17:17.35:17,0,109	0/0:20,0:20:13.07:0,13,161	0/0:24,0:22:2.99:0,3,24	0/1:12,0:10:25.70:26,0,54	0/0:18,0:14:7.79:0,8,114	0/1:7,0:7:0.18:27,0,0	0/1:16,0:14:40.45:40,0,100	0/1:22,0:21:0:0,0,0	./.	./.	0/0:15,0:15:3.01:0,3,47	0/0:26,0:23:2.96:0,3,19	0/0:13,0:11:0:0,0,0	0/0:23,0:21:14.34:0,14,211	0/0:19,0:14:12.88:0,13,105	0/0:13,0:11:29.78:0,30,230
chr10	39598646	.	GTCTCTGTCTCTC	G	942.01	PASS	AB=0.981;AC=14;AF=0.368;AN=38;BaseQRankSum=-2.199;DP=561;FS=0.641;HRun=0;HaplotypeScore=181.0126;InbreedingCoeff=0.0087;MQ=35.26;MQ0=32;MQRankSum=1.991;QD=4.21;ReadPosRankSum=-2.161;VQSLOD=2.4450;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:22:0.13:1,0,0	./.	0/0:25,0:6:9.04:0,9,223	0/0:36,0:7:21.01:0,21,305	./.	1/1:4,19:21:3.01:36,3,0	./.	0/0:42,0:37:74.49:0,74,731	1/1:7,8:14:27.05:636,27,0	0/1:29,0:27:33.89:34,0,655	./.	0/1:14,0:12:34.45:34,0,43	0/1:21,1:18:0.33:131,0,0	0/1:21,0:21:70.40:70,0,139	./.	0/1:10,0:10:10.82:11,0,49	0/1:18,0:14:40.48:87,0,40	0/1:7,0:7:9.01:9,0,53	0/0:18,0:16:22.66:0,23,236	0/1:23,0:22:0:0,0,0	./.	./.	./.	0/0:28,0:25:3.01:0,3,42	./.	0/0:22,0:21:28.61:0,29,643	0/0:19,0:14:9.48:0,9,135	0/1:13,0:11:17:17,0,96
chr10	39598648	.	CTCTG	C	1545.05	PASS	AB=1.000;AC=25;AF=0.595;AN=42;BaseQRankSum=-2.221;DP=577;FS=1.285;HRun=0;HaplotypeScore=151.2146;InbreedingCoeff=0.4729;MQ=35.05;MQ0=34;MQRankSum=2.315;QD=5.60;ReadPosRankSum=-1.701;VQSLOD=1.9243;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:22:0.89:3,1,0	./.	0/0:25,0:6:8.62:0,9,102	0/0:36,0:7:14.02:0,14,133	1/1:25,0:24:1.25:3,1,0	1/1:23,0:20:2.94:18,3,0	./.	0/0:43,0:38:61.76:0,62,511	1/1:17,0:14:26.99:269,27,0	0/1:30,0:28:82.84:346,0,83	./.	1/1:13,1:12:15.27:140,15,0	1/1:21,1:18:11.03:255,11,0	1/1:21,2:23:27.83:317,28,0	1/1:24,0:22:1.25:3,1,0	1/1:12,0:10:10.34:130,10,0	1/1:19,0:15:4.08:148,4,0	0/1:7,0:7:0.31:23,0,0	0/0:21,0:19:17.97:0,18,133	1/1:23,0:22:0.47:1,0,0	./.	./.	./.	0/0:9,17:23:2.74:0,3,42	./.	0/0:25,0:23:26.82:0,27,233	0/0:21,0:17:2.91:0,3,38	0/1:13,0:11:32.60:33,0,33
chr10	39598650	.	CTG	C	1277.88	PASS	AB=0.992;AC=28;AF=0.667;AN=42;BaseQRankSum=0.107;DP=574;FS=1.308;HRun=0;HaplotypeScore=146.3450;InbreedingCoeff=0.2413;MQ=34.96;MQ0=35;MQRankSum=1.641;QD=3.71;ReadPosRankSum=-1.280;VQSLOD=2.6258;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:21:1.36:3,1,0	./.	0/0:24,0:6:8.15:0,8,101	0/0:34,0:7:14.02:0,14,133	1/1:25,1:25:2.96:19,3,0	1/1:23,0:20:2.94:18,3,0	./.	0/0:43,0:38:52.73:0,53,406	1/1:18,0:15:28.79:204,29,0	1/1:26,4:28:1.33:292,1,0	./.	1/1:12,0:10:15.27:123,15,0	1/1:21,1:18:13.47:208,13,0	1/1:23,0:23:27.80:237,28,0	1/1:24,0:22:2.97:20,3,0	1/1:11,1:10:10.24:105,10,0	0/1:20,1:16:11.63:110,0,12	0/1:5,0:5:5.64:27,0,6	0/1:21,0:19:6.43:6,0,140	1/1:23,0:22:0.47:1,0,0	./.	./.	./.	0/0:26,0:23:2.59:0,3,31	./.	0/1:25,0:23:6.27:6,0,115	0/1:23,0:18:2.88:3,0,10	0/1:13,0:11:17.53:33,0,18
chr10	39598678	.	CTCTGTGTGTGTGTGTGTGTGTGTGTGTGTG	C	1639.34	PASS	AB=0.987;AC=18;AF=0.391;AN=46;BaseQRankSum=0.913;DP=515;FS=3.415;HRun=0;HaplotypeScore=261.6226;InbreedingCoeff=-0.1808;MQ=32.82;MQ0=34;MQRankSum=-1.358;QD=5.17;ReadPosRankSum=2.359;VQSLOD=2.4152;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:22:0:0,0,0	1/1:5,0:3:2.98:21,3,0	./.	./.	0/0:20,0:20:12.04:0,12,1317	0/0:26,0:23:3.01:0,3,192	0/1:26,0:20:5.12:5,0,304	0/1:31,0:25:46.01:96,0,46	0/1:19,0:16:26.52:27,0,935	0/1:30,0:28:97.93:98,0,690	1/1:17,0:16:0.47:1,0,0	1/1:15,0:13:2.74:15,3,0	0/1:21,0:16:2.80:3,0,147	0/1:27,0:28:11.09:11,0,102	0/0:26,0:24:6.49:0,6,672	0/1:19,0:17:6.02:6,0,2132	0/0:18,0:13:8.34:0,8,936	0/0:4,0:4:6.57:0,7,30	0/1:28,0:24:99:191,0,99	./.	./.	0/0:16,0:14:15.05:0,15,1689	0/0:10,0:9:6.02:0,6,385	0/0:29,0:24:15.52:0,16,902	./.	0/1:23,1:22:99:242,0,148	0/1:20,2:17:16.95:859,0,17	0/1:6,0:6:11.87:193,0,12
chr10	39598680	.	CTGTGTGTGTGTGTGTGTGTG	C	1511.52	PASS	AB=0.935;AC=17;AF=0.425;AN=40;BaseQRankSum=5.234;DP=505;FS=3.136;HRun=0;HaplotypeScore=208.2600;InbreedingCoeff=0.5188;MQ=32.69;MQ0=33;MQRankSum=-4.368;QD=8.74;ReadPosRankSum=2.322;VQSLOD=2.5729;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	1/1:3,0:3:3.01:106,3,0	./.	./.	0/0:22,0:22:12.04:0,12,975	0/0:25,0:21:3.01:0,3,104	0/0:26,0:20:2.64:0,3,191	./.	0/0:20,0:17:17.92:0,18,663	0/1:27,2:27:16.83:304,0,17	1/1:8,7:16:0.47:1,0,0	./.	1/1:15,0:16:7.03:122,7,0	1/1:19,0:26:5.24:128,5,0	0/0:26,0:24:6.02:0,6,504	0/0:22,0:20:24.08:0,24,2072	0/0:22,0:16:18.95:0,19,991	0/0:4,0:4:1.55:0,2,4	1/1:26,0:22:3:135,3,0	./.	./.	0/0:16,0:14:15.05:0,15,1260	0/0:10,0:9:6.02:0,6,158	0/0:25,0:22:15.04:0,15,366	./.	1/1:22,0:20:3.01:145,3,0	1/1:17,0:17:15.05:564,15,0	1/1:3,0:4:3.01:144,3,0
chr10	39598904	.	T	TA	7804.78	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-9.528;DP=556;FS=26.520;HRun=8;HaplotypeScore=75.3911;InbreedingCoeff=0.9963;MQ=68.38;MQ0=0;MQRankSum=-2.085;QD=29.34;ReadPosRankSum=2.463;VQSLOD=3.3311;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,38:40:99:1269,111,0	1/1:1,8:9:24.07:277,24,0	0/0:11,0:11:22.89:0,23,180	0/0:16,0:15:32.67:0,33,285	0/0:27,0:27:69:0,69,622	0/0:15,0:14:35.81:0,36,325	0/0:18,0:18:45.01:0,45,408	1/1:3,31:34:90.24:1017,90,0	0/0:22,0:22:57.01:0,57,516	1/1:3,19:22:57.17:658,57,0	1/1:4,16:20:48.06:533,48,0	0/0:20,0:20:45:0,45,405	0/0:17,0:17:48.02:0,48,437	0/0:22,0:22:56.96:0,57,511	0/0:21,0:21:60.01:0,60,545	0/0:18,0:18:50.83:0,51,431	0/0:33,0:33:83.93:0,84,747	1/1:2,14:16:39.12:450,39,0	1/1:2,12:14:36.06:391,36,0	1/1:4,25:29:78.18:871,78,0	1/1:1,9:11:17.09:236,17,0	0/0:15,0:15:26.99:0,27,244	0/0:24,0:24:54:0,54,486	0/0:11,0:11:24:0,24,216	1/1:1,18:18:57.17:655,57,0	1/1:2,22:23:66.16:747,66,0	1/1:4,16:21:44.96:494,45,0	1/1:1,6:7:18.05:208,18,0
chr10	39598994	.	T	TG	19616.94	PASS	AB=0.938;AC=54;AF=0.964;AN=56;BaseQRankSum=-4.537;DP=558;FS=7.187;HRun=1;HaplotypeScore=175.2721;InbreedingCoeff=-0.0331;MQ=54.22;MQ0=7;MQRankSum=-0.250;QD=35.16;ReadPosRankSum=4.466;VQSLOD=3.8674;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,27:34:62.68:978,63,0	1/1:0,9:9:27.09:402,27,0	0/1:27,1:7:70.52:71,0,90	0/1:18,2:8:2.49:105,0,2	1/1:3,26:29:55.89:862,56,0	1/1:1,22:23:69.22:1027,69,0	1/1:1,24:25:72.17:1045,72,0	1/1:0,16:15:45.15:675,45,0	1/1:6,18:24:69.22:1012,69,0	1/1:1,16:17:48.15:716,48,0	1/1:4,9:13:29.02:419,29,0	1/1:2,22:24:66.22:948,66,0	1/1:2,22:24:69.23:999,69,0	1/1:2,21:23:63.17:891,63,0	1/1:2,23:25:66.15:997,66,0	1/1:0,32:32:93.17:1336,93,0	1/1:6,19:25:57.09:801,57,0	1/1:2,8:10:10.86:354,11,0	1/1:3,9:12:27.09:411,27,0	1/1:0,18:18:54.18:821,54,0	1/1:2,12:14:18.25:451,18,0	1/1:1,12:13:33.11:496,33,0	1/1:2,17:19:54.18:802,54,0	1/1:3,20:23:51.13:755,51,0	1/1:2,15:17:35.86:638,36,0	1/1:2,18:20:57.04:862,57,0	1/1:1,14:15:34.99:557,35,0	1/1:0,4:4:12.04:185,12,0
chr10	39599003	.	G	GAC	3184.45	PASS	AB=0.842;AC=31;AF=0.554;AN=56;BaseQRankSum=-3.521;DP=625;FS=3.652;HRun=0;HaplotypeScore=249.5028;InbreedingCoeff=0.2339;MQ=49.69;MQ0=7;MQRankSum=-3.277;QD=7.09;ReadPosRankSum=-3.542;VQSLOD=2.8280;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:38,1:44:35.71:307,36,0	0/1:9,0:9:17.95:18,0,28	0/0:29,0:7:3.01:0,3,34	0/0:18,0:5:2.13:0,2,32	0/1:18,10:28:34.35:371,0,34	0/0:26,0:26:35.93:0,36,356	0/1:27,0:28:18.19:18,0,193	1/1:22,0:21:13.15:68,13,0	0/0:23,0:25:38.93:0,39,409	1/1:15,0:19:14.97:143,15,0	1/1:11,0:15:11.97:97,12,0	0/0:11,0:25:18.63:0,19,129	0/1:16,9:26:70.28:289,0,70	0/1:16,7:23:3.44:369,0,3	1/1:17,13:30:5.49:505,5,0	0/1:18,8:27:14.18:357,0,14	0/1:21,8:30:19.11:160,0,19	1/1:11,0:13:18.79:137,19,0	0/0:16,0:16:0.31:0,0,1	1/1:20,0:20:2.66:25,3,0	1/1:18,0:18:6.44:47,6,0	0/1:10,3:13:14.02:102,0,14	0/0:11,0:16:8.38:0,8,40	0/0:15,0:21:7.68:0,8,33	0/1:19,0:19:0:1,0,0	1/1:25,0:25:17.98:168,18,0	1/1:28,0:30:23.04:172,23,0	1/1:8,0:8:1.55:4,2,0
chr10	39600546	.	C	CGT	2367.53	PASS	AB=0.944;AC=12;AF=0.214;AN=56;BaseQRankSum=-1.156;DP=591;FS=16.269;HRun=0;HaplotypeScore=123.6529;InbreedingCoeff=0.3105;MQ=61.19;MQ0=12;MQRankSum=1.790;QD=13.15;ReadPosRankSum=-1.821;VQSLOD=2.1789;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:29:59.70:0,60,694	0/0:14,0:14:24.07:0,24,298	0/0:31,0:19:29.05:0,29,297	0/0:35,0:16:35.22:0,35,365	0/0:26,0:26:54.17:0,54,675	0/1:16,0:17:33.53:34,0,249	0/0:26,0:26:59.99:0,60,698	1/1:19,0:18:2.59:48,3,0	0/1:14,0:14:9.94:10,0,140	0/0:22,0:20:57.17:0,57,685	0/0:27,0:26:57.15:0,57,694	1/1:12,14:26:55.07:889,55,0	0/0:12,0:12:19.87:0,20,230	0/0:18,0:18:35.31:0,35,405	0/0:28,0:28:63.20:0,63,785	0/0:12,0:12:24.04:0,24,283	0/0:32,0:32:90.19:0,90,1048	0/0:21,0:19:33.10:0,33,411	0/0:15,0:14:2.26:0,2,6	0/1:11,0:10:10.27:12,0,10	0/0:17,0:13:2.60:0,3,10	0/0:22,0:22:42.11:0,42,510	1/1:6,12:18:7.60:615,8,0	0/1:21,21:40:12.33:847,0,12	0/0:14,0:13:5.95:0,6,15	0/1:16,0:15:12.26:61,0,12	0/1:17,0:13:0.60:1,0,10	0/0:7,0:6:1.88:0,2,8
chr10	39600558	.	TGC	T	1166.24	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=5.985;DP=599;FS=0.000;HRun=0;HaplotypeScore=135.6992;InbreedingCoeff=0.8281;MQ=51.20;MQ0=16;MQRankSum=-7.006;QD=9.26;ReadPosRankSum=-3.053;VQSLOD=2.9334;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:27:45.24:0,45,1022	0/0:11,0:11:24.08:0,24,440	0/0:35,0:11:19.23:0,19,291	0/0:45,0:12:29.03:0,29,473	0/0:24,0:24:63.01:0,63,1073	0/1:17,0:17:16.91:17,0,529	0/0:36,0:36:52.38:0,52,1223	1/1:16,2:15:17.35:233,17,0	0/0:17,0:17:17.17:0,17,315	0/0:21,0:19:57.15:0,57,955	0/0:21,0:20:57.07:0,57,910	0/0:26,0:26:57.27:0,57,590	0/0:12,0:12:26.43:0,26,405	0/0:20,0:20:40.32:0,40,534	0/0:23,0:23:67.43:0,67,1177	0/0:12,0:12:33.05:0,33,502	0/0:37,0:37:99:0,102,1534	0/0:19,0:18:19.61:0,20,567	1/1:7,1:7:15.22:112,15,0	1/1:9,3:11:14.46:113,14,0	1/1:11,1:7:2.98:21,3,0	0/0:21,0:21:24.15:0,24,848	0/0:19,0:19:0.18:0,0,402	0/0:42,0:40:19.40:0,19,621	1/1:9,8:16:23.88:228,24,0	1/1:12,4:15:19.69:297,20,0	1/1:8,9:13:19.92:260,20,0	1/1:5,3:8:11.77:82,12,0
chr10	39600559	.	GCGTGTGT	G	2704.70	PASS	AB=0.968;AC=20;AF=0.357;AN=56;BaseQRankSum=3.456;DP=601;FS=2.599;HRun=0;HaplotypeScore=171.8206;InbreedingCoeff=0.3532;MQ=51.18;MQ0=16;MQRankSum=-7.224;QD=11.08;ReadPosRankSum=-4.512;VQSLOD=1.6533;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:25:34.70:0,35,1171	0/0:11,0:11:24.02:0,24,417	0/0:35,0:11:0.15:0,0,423	0/0:45,0:12:29.03:0,29,550	0/0:24,0:24:63.68:0,64,2193	0/1:17,0:17:21.71:22,0,962	0/0:38,0:38:78.81:0,79,1844	1/1:17,0:14:39.05:533,39,0	0/1:18,0:18:43.32:43,0,551	0/0:21,0:19:57.11:0,57,1196	0/0:21,0:20:57.14:0,57,1211	0/0:27,0:27:53.60:0,54,1475	0/0:12,0:12:6.36:0,6,853	0/0:21,0:21:44.72:0,45,1041	0/0:24,0:24:72.17:0,72,2386	0/0:12,0:12:33.11:0,33,1103	0/0:37,0:37:99:0,108,3212	0/1:18,0:16:18.21:18,0,841	0/1:6,1:7:8.81:264,0,9	1/1:10,2:11:15.05:283,15,0	1/1:11,1:7:3.01:83,3,0	0/1:21,0:21:2.85:3,0,1863	0/1:19,0:19:60.56:61,0,1144	0/1:42,0:40:5.75:6,0,1759	1/1:17,0:16:23.58:306,24,0	0/1:16,1:16:8.62:641,0,9	1/1:16,1:13:35.12:435,35,0	1/1:9,0:8:12.04:192,12,0
chr10	39600563	.	GTGT	G	1531.29	PASS	AB=0.922;AC=16;AF=0.286;AN=56;BaseQRankSum=7.150;DP=587;FS=3.741;HRun=0;HaplotypeScore=142.3149;InbreedingCoeff=0.6039;MQ=49.38;MQ0=17;MQRankSum=-8.451;QD=10.71;ReadPosRankSum=-3.044;VQSLOD=3.0415;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:24:21.06:0,21,586	0/0:10,0:10:18.03:0,18,235	0/0:36,0:11:26.53:0,27,367	0/0:44,0:10:21.07:0,21,300	0/0:24,0:24:63.68:0,64,1283	0/1:17,0:17:8.70:9,0,517	0/0:38,0:38:96.62:0,97,1219	1/1:13,2:12:23.99:241,24,0	0/1:19,0:19:42.94:43,0,270	0/0:19,0:17:42.14:0,42,683	0/0:18,0:18:51.13:0,51,767	0/0:27,0:27:61.03:0,61,1165	0/0:12,0:12:27.07:0,27,562	0/0:19,0:19:33.54:0,34,671	0/0:25,0:25:68.60:0,69,1331	0/0:13,0:13:39.13:0,39,838	0/0:33,0:33:70.57:0,71,1793	0/0:17,0:15:1.56:0,2,441	0/1:8,1:8:5.16:144,0,5	1/1:9,3:11:15.01:148,15,0	1/1:12,1:8:3:27,3,0	0/0:20,0:20:18.45:0,18,1055	0/0:19,0:19:21.74:0,22,815	0/0:40,0:38:56.75:0,57,1224	1/1:9,8:16:23.87:285,24,0	0/1:11,4:14:28.24:355,0,28	1/1:8,9:13:31.89:343,32,0	1/1:6,3:8:11.62:123,12,0
chr10	39600565	.	GT	G	1315.23	PASS	AB=0.814;AC=15;AF=0.268;AN=56;BaseQRankSum=7.328;DP=576;FS=3.826;HRun=2;HaplotypeScore=126.9713;InbreedingCoeff=0.6560;MQ=48.05;MQ0=17;MQRankSum=-8.131;QD=10.52;ReadPosRankSum=-2.673;VQSLOD=0.9200;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:24:16.22:0,16,448	0/0:10,0:10:17.94:0,18,192	0/0:33,0:9:27.05:0,27,325	0/0:42,0:8:21.07:0,21,272	0/0:24,0:24:63.21:0,63,917	0/0:17,0:17:7.95:0,8,321	0/0:37,1:38:97.93:0,98,878	1/1:8,5:10:24.05:265,24,0	0/1:20,0:20:57.13:57,0,152	0/0:18,0:16:41.88:0,42,502	0/0:19,0:18:51.04:0,51,611	0/0:27,0:27:62.46:0,62,832	0/0:12,0:12:26.68:0,27,369	0/0:18,0:18:33.11:0,33,480	0/0:24,0:24:68.04:0,68,963	0/0:13,0:13:39.13:0,39,576	0/0:33,0:33:63.16:0,63,1225	0/0:16,1:15:0.56:0,1,338	0/1:5,4:8:10.94:136,0,11	1/1:6,6:11:14.72:102,15,0	1/1:5,8:8:2.88:15,3,0	0/0:19,1:20:17.87:0,18,721	0/0:19,0:19:21.76:0,22,550	0/0:39,0:37:55.70:0,56,808	1/1:9,8:16:23.46:226,23,0	0/1:10,5:14:6.34:308,0,6	1/1:13,4:13:31.10:257,31,0	1/1:5,4:8:12.03:133,12,0
chr10	39600566	.	T	TTG	2257.34	PASS	AB=0.952;AC=19;AF=0.352;AN=54;BaseQRankSum=1.739;DP=584;FS=2.389;HRun=0;HaplotypeScore=141.4817;InbreedingCoeff=0.6749;MQ=47.19;MQ0=18;MQRankSum=-1.825;QD=11.29;ReadPosRankSum=-3.518;VQSLOD=2.8609;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:24:22.85:164,23,0	1/1:2,0:8:3.47:27,3,0	./.	0/0:41,0:7:3.01:0,3,36	0/0:23,0:24:44.85:0,45,499	1/1:10,7:17:4.23:494,4,0	1/1:31,7:39:69.14:1033,69,0	1/1:14,0:11:0.77:32,1,0	1/1:5,15:20:26.94:375,27,0	1/1:15,0:14:12.99:94,13,0	1/1:15,0:18:14.09:83,14,0	0/0:26,0:27:26.03:0,26,425	0/0:12,0:12:27.06:0,27,308	0/0:18,0:18:26.18:0,26,256	0/0:23,0:23:53.98:0,54,611	0/0:13,0:13:36.11:0,36,429	0/0:29,0:33:81.98:0,82,972	1/1:11,0:15:12.86:102,13,0	0/0:10,0:8:0.59:0,1,3	0/0:13,0:12:7.08:0,7,21	0/0:17,0:12:2.60:0,3,10	0/0:20,0:20:44.96:0,45,513	0/0:17,0:18:37.75:0,38,397	0/0:38,0:37:53.54:0,54,539	0/0:19,0:18:5.58:0,6,14	0/0:14,0:14:1.38:0,1,48	0/1:19,0:16:5.69:34,0,6	0/0:8,0:8:1.94:0,2,8
chr10	39600591	.	T	TTG	2373.09	PASS	AB=0.846;AC=24;AF=0.480;AN=50;BaseQRankSum=5.495;DP=590;FS=1.069;HRun=0;HaplotypeScore=158.7220;InbreedingCoeff=0.1459;MQ=43.66;MQ0=15;MQRankSum=-7.056;QD=6.96;ReadPosRankSum=-5.270;VQSLOD=1.9273;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:27,6:28:97.50:325,0,97	0/1:5,2:7:25.68:61,0,26	0/0:25,0:1:3:0,3,27	./.	0/0:7,0:19:25.32:0,25,124	0/0:18,0:22:16.87:0,17,412	0/0:34,0:37:46.30:0,46,556	1/1:19,0:18:7.36:22,7,0	0/0:17,0:19:27.33:0,27,280	0/1:10,5:14:14.15:233,0,14	0/1:14,0:13:37.98:38,0,55	1/1:14,11:26:2.07:447,2,0	1/1:6,8:16:15.05:219,15,0	0/1:7,11:19:11.27:272,0,11	0/0:17,0:18:35.92:0,36,389	0/0:12,0:12:27.08:0,27,318	0/0:40,0:42:47.17:0,47,797	0/1:12,1:13:42.59:139,0,43	1/1:16,0:13:5.86:45,6,0	./.	1/1:24,0:21:0.47:1,0,0	0/1:18,0:19:10.45:10,0,313	1/1:14,7:21:27.09:363,27,0	0/1:28,15:42:16.24:285,0,16	0/1:18,0:19:0.03:0,0,0	1/1:14,0:14:6.36:49,6,0	0/1:16,0:18:6.31:23,0,6	./.
chr10	39600607	.	GTGTGTGCGTGTGT	G	3575.37	PASS	AB=0.931;AC=16;AF=0.296;AN=54;BaseQRankSum=2.095;DP=596;FS=0.912;HRun=0;HaplotypeScore=233.7690;InbreedingCoeff=0.3998;MQ=45.77;MQ0=10;MQRankSum=-5.899;QD=14.19;ReadPosRankSum=-6.293;VQSLOD=0.7692;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:26:34.66:0,35,992	0/0:6,0:6:11.70:0,12,250	0/0:18,0:4:12.04:0,12,296	0/0:27,0:8:23.75:0,24,576	0/0:16,0:16:36.53:0,37,1183	0/0:23,0:23:19.03:0,19,2472	0/0:49,0:48:83.18:0,83,3602	0/1:8,20:26:43.69:672,0,44	0/0:17,0:17:19.54:0,20,1484	0/0:15,0:15:32.47:0,32,883	0/0:13,0:13:1.05:0,1,383	0/1:25,0:25:57.47:57,0,705	0/0:19,0:19:36.07:0,36,1174	0/1:20,0:19:32.18:32,0,1024	0/0:18,0:17:41.71:0,42,1635	0/0:11,0:11:33.11:0,33,1741	0/0:41,0:40:80.62:0,81,4362	0/0:19,0:19:23.32:0,23,667	1/1:17,0:13:35.22:381,35,0	1/1:7,8:15:18.06:416,18,0	1/1:11,21:28:5.70:94,6,0	0/0:20,0:20:48.16:0,48,2338	0/1:19,0:19:99:103,0,179	0/1:45,0:43:99:128,0,507	1/1:16,1:17:17.25:394,17,0	0/1:17,0:17:59.50:570,0,60	1/1:15,2:15:34.27:728,34,0	./.
chr10	39600613	.	GCGTGTGT	G	2740.59	PASS	AB=0.949;AC=16;AF=0.296;AN=54;BaseQRankSum=4.924;DP=570;FS=1.931;HRun=0;HaplotypeScore=176.0718;InbreedingCoeff=0.4101;MQ=48.26;MQ0=10;MQRankSum=-8.367;QD=11.76;ReadPosRankSum=-6.374;VQSLOD=0.3230;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:23:43.91:0,44,794	0/0:6,0:6:5.33:0,5,176	0/0:26,0:9:26.30:0,26,444	0/0:28,0:10:29.77:0,30,642	0/0:14,0:14:36.06:0,36,784	0/0:24,0:24:23.04:0,23,1742	0/0:52,0:51:91.98:0,92,2839	0/1:26,0:24:99:545,0,123	0/0:14,0:14:22.68:0,23,1102	0/0:18,0:18:44.41:0,44,725	0/0:10,0:10:6.56:0,7,336	0/1:23,0:23:70.78:71,0,474	0/0:17,0:17:33.11:0,33,783	0/1:17,0:16:29.30:29,0,691	0/0:16,0:15:41.71:0,42,1239	0/0:13,0:13:39.13:0,39,1285	0/0:39,0:39:55.79:0,56,3185	0/0:18,0:18:26.52:0,27,520	1/1:14,0:12:35.37:350,35,0	1/1:15,0:15:18.06:336,18,0	1/1:31,0:27:5.21:73,5,0	0/0:17,0:17:47.90:0,48,1576	0/1:17,0:17:99:136,0,104	0/1:40,0:38:99:134,0,297	1/1:17,0:17:17.17:335,17,0	0/1:9,7:16:20.69:410,0,21	1/1:17,0:15:34.26:503,34,0	./.
chr10	39600620	.	T	TTGTG	1949.42	PASS	AB=0.710;AC=23;AF=0.426;AN=54;BaseQRankSum=9.585;DP=576;FS=5.200;HRun=0;HaplotypeScore=159.0028;InbreedingCoeff=0.7431;MQ=49.92;MQ0=11;MQRankSum=-4.333;QD=7.56;ReadPosRankSum=-1.304;VQSLOD=2.4321;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:3,0:26:2:226,0,2	1/1:2,0:5:14.09:69,14,0	0/0:32,0:13:27.80:0,28,423	0/0:35,0:17:45.13:0,45,658	0/0:15,0:15:27.07:0,27,427	0/0:21,0:22:4.92:0,5,519	0/0:54,0:53:70.29:0,70,1347	1/1:26,0:24:16.48:160,16,0	0/0:14,0:14:14.71:0,15,473	1/1:5,0:19:29.38:207,29,0	0/1:4,0:12:30.37:78,0,30	1/1:11,12:24:33:585,33,0	0/0:16,0:16:24.08:0,24,396	0/0:17,0:16:23.47:0,23,390	0/0:15,0:14:18.03:0,18,251	0/0:13,0:13:27.05:0,27,419	0/0:38,0:38:74.97:0,75,1174	1/1:3,0:19:24.76:112,25,0	1/1:7,0:8:13.50:86,13,0	0/0:14,0:14:0:0,0,0	0/1:30,0:26:0:1,0,0	0/0:20,0:20:44.82:0,45,634	1/1:7,11:18:15.03:249,15,0	1/1:20,19:38:18.03:287,18,0	0/0:13,0:13:0.01:0,0,0	1/1:14,0:14:11.96:74,12,0	1/1:13,0:12:3.18:9,3,0	./.
chr10	39601364	.	GA	G	5294.54	PASS	AB=0.529;AC=15;AF=0.268;AN=56;BaseQRankSum=12.049;DP=517;FS=20.467;HRun=3;HaplotypeScore=49.7697;InbreedingCoeff=0.9105;MQ=84.86;MQ0=0;MQRankSum=-1.916;QD=32.89;ReadPosRankSum=-0.231;VQSLOD=2.7890;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,105,1456	0/0:10,0:10:30.09:0,30,415	0/0:18,0:18:46.95:0,47,620	0/0:16,0:16:42.14:0,42,571	0/0:15,0:15:45.14:0,45,621	0/0:25,0:25:75.25:0,75,1079	0/0:22,0:22:66.20:0,66,900	1/1:0,21:21:63.19:769,63,0	0/0:14,0:14:42.12:0,42,584	0/0:22,0:22:66.22:0,66,947	0/0:9,0:9:24.08:0,24,345	0/0:9,0:9:27.09:0,27,387	0/0:21,0:21:63.19:0,63,873	0/0:17,0:17:51.17:0,51,734	0/0:21,0:21:60.20:0,60,864	0/0:13,0:13:36.11:0,36,500	0/0:15,0:15:39.10:0,39,539	0/0:18,0:18:54.18:0,54,770	1/1:2,17:19:51.16:631,51,0	1/1:0,18:18:48.08:576,48,0	1/1:4,39:43:99:1338,108,0	0/0:23,0:23:69.22:0,69,975	0/0:11,0:11:33.10:0,33,458	0/0:22,0:22:66.22:0,66,949	1/1:0,20:20:60.19:743,60,0	0/1:1,8:9:16.13:270,0,16	1/1:3,17:20:45.14:558,45,0	1/1:0,11:11:33.10:409,33,0
chr10	39601691	.	G	GTGCA	2287.24	PASS	AB=1.000;AC=12;AF=0.214;AN=56;BaseQRankSum=-8.127;DP=605;FS=1.589;HRun=0;HaplotypeScore=108.5153;InbreedingCoeff=0.7457;MQ=45.83;MQ0=46;MQRankSum=0.430;QD=18.75;ReadPosRankSum=5.084;VQSLOD=3.3742;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,31:30:27.09:707,27,0	1/1:0,2:3:3.01:82,3,0	0/0:18,0:7:18.03:0,18,286	0/0:29,0:13:36.08:0,36,557	0/0:20,0:18:33.11:0,33,586	0/0:20,0:19:12.87:0,13,163	0/0:35,0:28:21.22:0,21,294	0/0:21,0:18:22.93:0,23,166	0/1:34,0:24:4.63:5,0,115	1/1:3,12:13:33.11:780,33,0	1/1:1,7:8:11.78:329,12,0	0/0:20,0:15:24.04:0,24,381	0/0:26,0:21:28.14:0,28,330	0/0:36,0:32:29.90:0,30,325	0/0:24,0:22:51.14:0,51,889	0/0:19,0:20:42.10:0,42,745	0/0:36,0:36:78.22:0,78,1376	1/1:3,12:11:21.07:548,21,0	0/0:23,0:17:37:0,37,398	0/0:7,0:7:2.66:0,3,6	0/0:67,0:64:68.61:0,69,800	0/0:20,0:19:44.89:0,45,778	0/0:7,0:10:9.03:0,9,122	0/0:18,0:15:12.03:0,12,195	0/0:12,0:10:12.22:0,12,130	0/0:12,0:11:18.59:0,19,225	0/0:7,0:6:12.93:0,13,209	0/1:11,0:10:0.91:1,0,58
chr10	39601778	.	CTG	C	147.99	PASS	AB=0.917;AC=10;AF=0.185;AN=54;BaseQRankSum=3.296;DP=929;FS=9.137;HRun=0;HaplotypeScore=178.8312;InbreedingCoeff=0.6798;MQ=44.31;MQ0=97;MQRankSum=-3.093;QD=4.48;ReadPosRankSum=-0.941;VQSLOD=2.2645;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,3:8:3:39,3,0	1/1:0,2:2:6.02:78,6,0	0/0:29,0:5:13.97:0,14,126	0/0:39,0:4:11.97:0,12,170	0/0:11,0:9:21.07:0,21,357	0/0:51,0:45:72.09:0,72,1224	0/0:102,0:84:99:0,148,2395	0/0:16,0:16:2.64:0,3,206	0/0:129,0:104:99:0,232,3788	1/1:1,3:3:9.03:117,9,0	1/1:1,2:3:3.01:39,3,0	0/0:52,1:44:47.84:0,48,1298	0/0:75,0:65:99:0,156,2538	0/0:92,0:83:99:0,193,3210	0/0:53,0:48:99:0,117,1988	0/0:38,0:37:78.27:0,78,1312	0/0:47,0:41:96.30:0,96,1573	0/1:4,1:1:0:0,0,0	0/0:13,0:11:5.52:0,6,86	0/1:7,0:5:0:0,0,0	0/0:26,0:23:17.96:0,18,187	0/0:19,0:16:37.68:0,38,609	0/0:28,0:24:18.06:0,18,305	0/0:37,1:29:32.99:0,33,512	0/0:12,0:8:18.04:0,18,184	0/0:17,0:15:19.20:0,19,386	0/0:6,0:6:5.47:0,5,60	./.
chr10	39601802	.	GTA	G	143.37	PASS	AB=0.889;AC=7;AF=0.125;AN=56;BaseQRankSum=7.587;DP=989;FS=5.595;HRun=0;HaplotypeScore=204.7288;InbreedingCoeff=0.4098;MQ=47.47;MQ0=31;MQRankSum=-3.844;QD=3.41;ReadPosRankSum=-3.088;VQSLOD=2.1415;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:3:2.98:0,3,22	0/0:2,0:2:5.74:0,6,31	0/0:15,0:6:8.50:0,8,139	0/0:22,0:4:11.13:0,11,87	0/0:13,0:12:29.96:0,30,410	0/0:67,0:63:99:0,112,1755	0/0:114,0:103:99:0,131,2867	0/0:22,1:18:33.30:0,33,274	0/0:137,0:118:99:0,253,4165	0/1:5,5:7:20.56:100,0,21	0/0:3,1:3:3.47:0,3,25	0/0:59,0:50:37.39:0,37,882	0/0:84,0:79:99:0,184,3106	0/0:108,0:104:99:0,243,4009	0/0:51,0:48:99:0,117,1989	0/0:42,0:41:99:0,108,1749	0/0:50,0:48:66.45:0,66,1667	1/1:4,2:5:13:119,13,0	0/1:18,0:9:23.96:24,0,93	0/1:6,0:6:0:0,0,0	0/0:20,0:18:17.57:0,18,146	0/0:19,0:18:42.10:0,42,691	0/0:37,0:33:14.71:0,15,169	0/0:41,0:33:22.13:0,22,337	0/0:13,0:10:18.02:0,18,214	0/0:17,0:16:26.28:0,26,446	0/0:4,0:3:6:0,6,81	1/1:2,0:2:2.97:20,3,0
chr10	39601814	.	GTGTGTGCA	G	182.66	PASS	AB=0.965;AC=6;AF=0.143;AN=42;BaseQRankSum=3.099;DP=961;FS=3.955;HRun=0;HaplotypeScore=254.7140;InbreedingCoeff=0.4472;MQ=44.63;MQ0=55;MQRankSum=-2.244;QD=1.30;ReadPosRankSum=0.568;VQSLOD=2.5556;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:3:0:0,0,0	./.	./.	./.	0/0:16,0:13:15.05:0,15,525	0/0:65,0:58:65.86:0,66,2509	0/0:113,0:95:99:0,103,3094	0/0:19,0:14:11.97:0,12,124	0/0:138,0:114:99:0,171,6174	0/0:14,0:10:23.11:0,23,386	0/1:4,0:3:0:0,0,0	0/1:46,5:43:99:221,0,194	0/0:91,0:83:99:0,144,5004	0/0:109,0:102:99:0,181,6582	0/0:48,0:44:60.21:0,60,2271	0/0:47,0:45:78.27:0,78,3059	0/0:45,0:42:66.22:0,66,2287	0/0:9,0:7:8.06:0,8,105	./.	./.	0/1:14,0:10:0:0,0,0	0/0:18,0:17:30.10:0,30,1035	0/1:31,2:32:0:0,0,0	1/1:33,1:25:2.88:49,3,0	./.	0/0:15,0:14:8.98:0,9,122	./.	0/0:2,0:2:2.97:0,3,20
chr10	39601820	.	GCA	G	373.42	PASS	AB=0.834;AC=15;AF=0.278;AN=54;BaseQRankSum=8.622;DP=912;FS=1.667;HRun=0;HaplotypeScore=167.6147;InbreedingCoeff=0.2344;MQ=43.77;MQ0=69;MQRankSum=-6.169;QD=2.39;ReadPosRankSum=-4.011;VQSLOD=1.6525;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:4,1:2:0:0,0,0	1/1:3,0:2:3.90:40,4,0	0/0:6,0:2:6.02:0,6,75	./.	0/0:16,0:13:27.08:0,27,497	0/0:62,0:55:95.88:0,96,1914	0/0:112,0:91:99:0,147,3243	0/1:13,2:13:97.71:98,0,168	0/0:135,0:106:99:0,224,4419	0/1:13,3:10:63.53:64,0,240	0/0:3,1:3:0.47:0,0,1	0/1:43,1:33:22.22:22,0,459	0/0:87,0:76:99:0,186,3607	0/0:104,0:96:99:0,232,4518	0/0:46,0:43:99:0,100,1941	0/0:48,0:45:99:0,102,2024	0/0:44,0:39:99:0,99,1891	0/1:8,1:6:14.43:40,0,14	0/1:11,3:2:6.27:32,0,6	0/1:5,5:10:0:0,0,0	0/1:8,1:4:0:0,0,0	0/0:18,0:18:42.14:0,42,844	0/0:24,3:26:5.69:0,6,109	0/0:31,1:21:11.59:0,12,167	1/1:10,3:8:7.95:61,8,0	0/1:8,5:11:55.40:147,0,55	1/1:3,1:2:2.50:9,2,0	0/0:2,0:2:2.60:0,3,10
chr10	39601828	.	GCA	G	258.78	PASS	AB=0.886;AC=15;AF=0.288;AN=52;BaseQRankSum=7.182;DP=880;FS=0.000;HRun=0;HaplotypeScore=151.7901;InbreedingCoeff=0.1789;MQ=42.88;MQ0=81;MQRankSum=-4.517;QD=1.53;ReadPosRankSum=-4.333;VQSLOD=1.0184;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:9,0:6:0:0,0,0	1/1:3,0:2:0.89:2,1,0	./.	./.	0/0:18,0:15:18.06:0,18,366	0/0:58,0:51:89.85:0,90,1766	0/0:102,0:79:99:0,148,2882	0/0:13,0:10:14.84:0,15,257	0/0:133,0:103:99:0,217,4245	0/1:13,3:10:62.36:62,0,382	0/0:4,0:3:0.47:0,0,1	0/1:42,1:33:13.08:13,0,461	0/0:80,0:69:99:0,169,3322	0/0:100,0:90:99:0,217,4234	0/0:45,0:41:84.73:0,85,1651	0/0:47,0:44:96.33:0,96,1937	0/0:39,0:34:84.96:0,85,1645	0/1:7,1:6:41.36:41,0,111	0/1:10,3:2:31.47:31,0,51	0/1:10,2:10:0:0,0,0	0/1:7,1:4:0:0,0,0	0/0:22,0:21:39.13:0,39,790	0/1:25,3:27:24.64:25,0,55	0/0:28,0:15:6.02:0,6,79	1/1:9,3:6:6.01:55,6,0	0/1:9,3:11:99:150,0,148	1/1:4,1:2:2.37:8,2,0	0/0:1,0:1:3.01:0,3,61
chr10	39601901	.	CTG	C	664.26	PASS	AB=0.838;AC=15;AF=0.326;AN=46;BaseQRankSum=7.013;DP=631;FS=44.269;HRun=0;HaplotypeScore=98.4404;InbreedingCoeff=0.3705;MQ=34.58;MQ0=115;MQRankSum=-6.178;QD=5.63;ReadPosRankSum=0.773;VQSLOD=1.1717;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,20:21:2.93:22,3,0	./.	0/0:38,0:2:6.02:0,6,102	0/0:34,0:3:9.03:0,9,153	0/0:47,0:42:86.43:0,86,1343	0/0:17,0:9:3.01:0,3,48	0/0:22,0:7:2.96:0,3,19	0/1:5,2:3:14.92:28,0,15	0/0:36,0:8:5.75:0,6,48	0/1:11,2:10:46.24:56,0,46	1/1:3,2:5:6.02:77,6,0	0/0:36,0:29:7.43:0,7,44	./.	0/0:24,0:13:2.84:0,3,14	0/0:47,0:43:90.26:0,90,1447	0/0:38,0:35:48.15:0,48,765	0/0:43,0:36:86.31:0,86,1423	0/1:12,3:12:99:172,0,111	0/1:7,2:6:0.96:78,0,1	./.	0/1:15,2:13:0.01:0,0,0	0/0:37,1:37:17.83:0,18,782	./.	0/0:39,0:27:3.43:0,3,12	./.	1/1:8,4:9:9.76:156,10,0	1/1:5,9:9:15.84:154,16,0	1/1:1,2:2:6.02:66,6,0
chr10	39601913	.	ATG	A	788.48	PASS	AB=0.848;AC=24;AF=0.500;AN=48;BaseQRankSum=8.514;DP=609;FS=30.203;HRun=0;HaplotypeScore=109.8894;InbreedingCoeff=0.3911;MQ=36.81;MQ0=88;MQRankSum=-4.370;QD=2.87;ReadPosRankSum=0.608;VQSLOD=0.8398;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:21,4:24:10.32:10,0,13	./.	0/0:29,0:2:6.02:0,6,65	0/0:26,0:3:9.03:0,9,126	0/0:42,1:42:31.38:0,31,1256	0/0:10,1:6:1.25:0,1,3	0/0:11,7:7:2.96:0,3,19	1/1:19,0:9:2.18:33,2,0	0/1:21,10:5:0.76:1,0,12	0/1:6,2:7:5.34:5,0,6	1/1:3,2:4:4.07:12,4,0	0/1:31,7:30:16.50:58,0,16	./.	1/1:13,1:6:3.01:35,3,0	0/0:51,0:48:99:0,102,1482	0/0:35,0:33:62.82:0,63,871	0/0:46,0:42:99:0,112,1634	0/1:11,3:11:92.38:128,0,92	1/1:14,0:8:2.83:72,3,0	./.	0/1:20,0:17:0.01:0,0,0	0/0:43,1:44:15.68:0,16,1011	1/1:12,0:7:3.01:32,3,0	1/1:32,12:33:15.89:176,16,0	./.	1/1:12,0:10:15.18:161,15,0	1/1:15,0:11:14.43:151,14,0	1/1:4,0:3:6.49:68,6,0
chr10	39601929	.	ATGTG	A	177.65	PASS	AB=0.931;AC=8;AF=0.174;AN=46;BaseQRankSum=2.748;DP=528;FS=12.324;HRun=0;HaplotypeScore=132.9239;InbreedingCoeff=0.4120;MQ=40.61;MQ0=40;MQRankSum=0.657;QD=1.46;ReadPosRankSum=-1.800;VQSLOD=1.6794;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:5.44:0,5,25	./.	./.	0/0:25,0:4:0:0,0,0	0/0:40,0:40:99:0,101,1813	1/1:9,1:5:2.72:12,3,0	0/0:7,4:3:0.47:0,0,1	0/0:19,0:10:14.13:0,14,163	1/1:8,8:2:3.01:37,3,0	0/0:7,0:7:14.94:0,15,138	0/0:6,0:5:6.02:0,6,64	0/1:38,1:33:48.49:48,0,140	./.	0/0:7,0:5:2.99:0,3,24	0/0:47,1:49:48.42:0,48,1945	0/0:29,0:30:65.95:0,66,1430	0/0:43,0:43:89.08:0,89,2136	0/0:13,0:12:26.68:0,27,252	0/0:12,0:6:12.95:0,13,102	./.	0/0:22,0:18:2.58:0,3,10	0/0:41,0:43:88.13:0,88,1706	1/1:10,0:7:9.03:132,9,0	0/1:41,6:38:65.76:66,0,95	./.	0/0:9,0:8:11.60:0,12,90	0/0:14,0:11:18.62:0,19,118	0/0:4,0:3:0:0,0,0
chr10	39601943	.	G	GCA	185.69	PASS	AB=0.965;AC=8;AF=0.167;AN=48;BaseQRankSum=2.562;DP=506;FS=0.000;HRun=0;HaplotypeScore=120.9533;InbreedingCoeff=0.1816;MQ=41.98;MQ0=36;MQRankSum=-0.458;QD=1.52;ReadPosRankSum=0.388;VQSLOD=1.8145;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:16,0:16:7.21:7,0,38	./.	0/0:19,0:4:5.91:0,6,38	0/0:19,0:3:2.99:0,3,23	0/0:40,0:39:60.97:0,61,1604	1/1:3,1:2:2.92:25,3,0	0/0:11,0:4:2.96:0,3,31	0/0:19,0:10:16.86:0,17,199	0/0:14,4:5:2.12:0,2,7	0/0:8,0:8:24.04:0,24,292	0/0:9,0:6:6.02:0,6,67	0/1:32,4:29:98.20:157,0,98	./.	1/1:7,1:6:2.85:58,3,0	0/0:47,0:47:99:0,123,1878	0/0:31,0:31:75.23:0,75,1173	0/0:41,0:41:99:0,120,1799	0/0:13,0:12:31.91:0,32,346	0/1:12,0:6:7.36:7,0,137	./.	0/0:20,0:16:2.44:0,2,16	0/0:38,0:38:99:0,99,1566	0/0:13,0:11:24.01:0,24,285	0/1:44,2:36:46.77:47,0,134	./.	0/0:9,0:8:16.90:0,17,170	0/0:13,0:11:24.50:0,25,183	0/0:2,0:1:0:0,0,0
chr10	39601949	.	GCA	G	672.14	PASS	AB=0.761;AC=16;AF=0.320;AN=50;BaseQRankSum=8.682;DP=476;FS=28.795;HRun=0;HaplotypeScore=106.3490;InbreedingCoeff=0.1353;MQ=42.62;MQ0=31;MQRankSum=-7.902;QD=4.17;ReadPosRankSum=-3.619;VQSLOD=-0.0074;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,2:12:2.97:21,3,0	0/0:1,1:1:3.01:0,3,50	0/0:19,0:4:2.80:0,3,13	0/0:21,0:3:4:0,4,58	0/0:34,0:33:92.80:0,93,1716	0/0:4,0:2:3.01:0,3,51	1/1:7,1:4:2.78:15,3,0	0/1:10,2:7:28.27:28,0,111	1/1:19,0:7:2.52:15,3,0	0/1:3,2:4:23.87:46,0,24	./.	0/0:37,1:30:20.83:0,21,348	0/0:8,0:3:3.01:0,3,49	0/0:8,1:7:2.98:0,3,52	0/0:46,0:46:99:0,120,2245	0/0:33,0:32:71.62:0,72,1370	0/0:40,1:41:52.83:0,53,1907	0/1:7,2:8:66.85:67,0,90	0/1:8,5:7:81.79:135,0,82	./.	0/1:7,7:12:0.11:0,0,1	0/0:36,0:36:90.29:0,90,1682	0/0:11,0:9:24.08:0,24,366	0/1:46,0:36:50.96:51,0,187	./.	0/1:4,5:8:27.66:195,0,28	1/1:3,9:11:25.81:240,26,0	0/1:1,1:1:0:0,0,0
chr10	39601955	.	G	GCA	115.81	PASS	AB=0.896;AC=7;AF=0.135;AN=52;BaseQRankSum=4.286;DP=493;FS=7.844;HRun=0;HaplotypeScore=110.7717;InbreedingCoeff=-0.0399;MQ=42.48;MQ0=36;MQRankSum=-3.675;QD=2.00;ReadPosRankSum=0.044;VQSLOD=0.9544;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:7,1:8:10.62:11,0,17	0/0:2,0:1:3.01:0,3,49	0/0:22,0:4:8.99:0,9,118	0/0:25,0:3:6.02:0,6,97	0/0:32,0:31:81.28:0,81,1319	0/0:7,0:3:3.01:0,3,48	0/0:9,0:4:2.92:0,3,20	0/0:12,0:8:15.01:0,15,210	0/0:21,0:9:8.18:0,8,81	0/1:6,1:6:48.23:48,0,105	0/0:8,0:6:3.01:0,3,45	0/0:40,0:31:27.56:0,28,436	0/0:9,0:4:3.01:0,3,49	0/0:13,0:11:5.99:0,6,94	0/0:47,0:47:99:0,123,2001	0/0:33,0:32:75.26:0,75,1224	0/0:40,0:40:93.03:0,93,1710	0/1:8,1:9:43.22:43,0,124	0/0:14,0:8:17.65:0,18,229	./.	1/1:13,1:12:2.76:17,3,0	0/0:38,0:38:96.23:0,96,1503	0/0:14,0:11:27.09:0,27,437	0/0:42,2:35:21.81:0,22,334	./.	0/1:8,1:8:54.37:76,0,54	0/1:10,1:10:39.22:39,0,97	0/0:1,0:1:2.94:0,3,18
chr10	39601957	.	GCA	G	275.01	PASS	AB=0.887;AC=12;AF=0.240;AN=50;BaseQRankSum=7.449;DP=484;FS=12.688;HRun=0;HaplotypeScore=105.2539;InbreedingCoeff=0.1979;MQ=42.85;MQ0=42;MQRankSum=-6.457;QD=2.99;ReadPosRankSum=-2.011;VQSLOD=1.2370;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:2,2:4:2.98:22,3,0	0/0:1,1:1:3.01:0,3,61	0/0:25,0:4:12:0,12,176	0/0:25,0:3:6.02:0,6,122	0/0:32,0:31:84.27:0,84,1600	0/0:8,0:4:3.01:0,3,45	1/1:12,0:4:0.79:2,1,0	0/0:8,1:7:11.98:0,12,191	0/1:20,0:9:6.88:7,0,101	0/1:6,1:6:4.61:5,0,203	0/0:6,2:6:3.01:0,3,61	0/0:41,0:32:29.82:0,30,568	0/0:9,0:4:5.98:0,6,81	0/0:13,0:11:5.91:0,6,110	0/0:48,0:48:99:0,126,2490	0/0:34,0:33:81.26:0,81,1594	0/0:39,2:41:99:0,112,2130	0/1:8,1:9:52.88:53,0,172	0/1:11,1:6:65.88:66,0,154	./.	0/1:9,4:10:0.11:0,0,1	0/0:36,0:36:93.32:0,93,1831	0/0:14,0:11:27.09:0,27,537	0/0:43,0:34:22.84:0,23,427	./.	0/1:5,1:5:47.46:84,0,47	1/1:1,8:8:17.85:165,18,0	./.
chr10	39601997	.	GTAACTTTA	G	382.67	PASS	AB=0.778;AC=3;AF=0.071;AN=42;BaseQRankSum=4.953;DP=446;FS=5.546;HRun=0;HaplotypeScore=131.0580;InbreedingCoeff=-0.1234;MQ=44.29;MQ0=63;MQRankSum=-4.546;QD=16.64;ReadPosRankSum=-2.106;VQSLOD=2.3552;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:2,0:1:3.01:0,3,73	0/0:1,0:1:3.01:0,3,136	./.	./.	0/0:22,0:22:57.17:0,57,2146	0/0:8,0:6:5.20:0,5,174	0/0:28,0:23:48.64:0,49,2094	0/0:9,0:5:12.04:0,12,503	0/0:19,0:17:32.70:0,33,1219	0/1:10,1:9:99:111,0,925	0/0:4,0:3:3.01:0,3,136	0/0:35,0:24:45.14:0,45,1719	0/0:10,0:9:6.02:0,6,271	0/0:20,0:17:21.46:0,21,721	0/0:37,0:37:99:0,99,3873	0/0:33,0:31:84.29:0,84,3242	0/0:34,0:34:90.31:0,90,3540	0/1:3,3:6:99:227,0,389	0/0:4,0:3:9.02:0,9,202	./.	./.	0/0:35,0:35:87.26:0,87,3485	0/0:18,0:16:42.14:0,42,1577	0/0:33,0:23:23.71:0,24,787	./.	0/1:4,2:3:99:139,0,127	./.	./.
chr10	39602011	.	GAGTATTT	G	342.48	PASS	AB=0.881;AC=4;AF=0.087;AN=46;BaseQRankSum=5.071;DP=442;FS=8.779;HRun=0;HaplotypeScore=110.3417;InbreedingCoeff=-0.1657;MQ=42.96;MQ0=48;MQRankSum=-4.976;QD=6.34;ReadPosRankSum=-2.068;VQSLOD=1.2715;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:2,0:1:3.01:0,3,76	0/0:1,0:1:3.01:0,3,126	0/0:38,0:1:3.01:0,3,126	0/0:37,0:3:9.03:0,9,311	0/0:24,0:24:60.13:0,60,2112	0/0:7,0:5:6.02:0,6,178	0/0:31,0:25:48.42:0,48,1507	0/0:7,0:3:6.02:0,6,187	0/0:23,0:21:32.12:0,32,1449	0/1:10,1:10:99:108,0,950	0/0:4,0:3:3.01:0,3,126	0/1:30,0:21:21.72:22,0,1126	0/0:14,0:13:2.63:0,3,179	0/0:22,0:19:21.97:0,22,618	0/0:36,0:36:93.29:0,93,3532	0/0:28,0:26:72.25:0,72,2702	0/0:31,0:30:84.26:0,84,3153	0/1:3,3:6:99:202,0,338	0/0:2,0:1:3.01:0,3,120	./.	./.	0/0:28,0:28:71.83:0,72,2721	0/0:18,0:16:39.13:0,39,1354	0/0:29,0:20:20.76:0,21,485	./.	0/1:6,0:3:99:114,0,117	./.	./.
chr10	39602022	.	C	CTGTGTGTG	1700.75	PASS	AB=1.000;AC=31;AF=0.738;AN=42;BaseQRankSum=5.197;DP=539;FS=3.607;HRun=0;HaplotypeScore=146.3692;InbreedingCoeff=0.5206;MQ=43.51;MQ0=36;MQRankSum=-5.049;QD=5.25;ReadPosRankSum=-3.165;VQSLOD=1.9642;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:3:0:0,0,0	./.	./.	./.	0/0:23,0:27:33.04:0,33,639	1/1:9,0:16:5.22:32,5,0	1/1:22,0:27:5.99:56,6,0	1/1:12,0:7:3.45:23,3,0	1/1:8,0:29:4.47:225,4,0	1/1:15,0:13:13.27:207,13,0	./.	1/1:34,0:28:11.61:219,12,0	1/1:7,9:25:3.01:123,3,0	1/1:11,12:29:6:147,6,0	0/0:39,0:42:58.94:0,59,1154	0/0:26,0:27:44.99:0,45,908	0/0:29,0:32:55.48:0,55,1277	1/1:7,0:7:9.03:194,9,0	1/1:3,0:2:3.01:67,3,0	./.	./.	0/1:36,0:37:11.57:12,0,825	1/1:23,0:22:6.02:110,6,0	1/1:32,0:24:5.97:45,6,0	1/1:4,0:3:2.80:24,3,0	1/1:9,0:7:17.27:265,17,0	./.	1/1:2,0:2:6.02:96,6,0
chr10	39602383	.	CACAGGAGTGCCGTGTGCA	C	5461.11	PASS	AB=0.718;AC=16;AF=0.286;AN=56;BaseQRankSum=13.903;DP=910;FS=6.234;HRun=0;HaplotypeScore=441.6581;InbreedingCoeff=0.2726;MQ=63.15;MQ0=7;MQRankSum=-5.968;QD=15.47;ReadPosRankSum=-1.242;VQSLOD=1.3812;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:10,34:44:8.15:530,0,8	1/1:2,3:5:12.04:533,12,0	0/0:29,0:26:46.65:0,47,1557	0/0:34,0:31:61.34:0,61,1918	0/0:20,0:20:50.92:0,51,2709	0/0:33,0:33:78.23:0,78,4612	0/0:35,0:35:93.04:0,93,3929	0/1:37,22:54:99:580,0,1019	0/0:36,0:36:99:0,99,4711	1/1:3,18:21:42.46:717,42,0	1/1:2,7:9:9.03:159,9,0	0/0:41,0:41:99:0,108,5355	0/0:33,0:33:93.19:0,93,4667	0/0:46,0:46:99:0,120,5985	0/0:39,0:39:99:0,105,5833	0/0:26,0:26:71.95:0,72,4001	0/0:38,0:37:96.02:0,96,4446	1/1:2,12:14:6.02:299,6,0	0/1:32,16:39:99:562,0,1374	0/1:18,21:39:99:114,0,1492	0/0:49,19:59:26.25:0,26,2169	0/0:24,0:24:60.11:0,60,2819	0/0:23,0:23:53.99:0,54,2331	0/0:32,0:32:93.13:0,93,4967	0/1:24,12:36:99:313,0,2259	0/1:24,24:47:99:1053,0,1901	0/1:23,0:22:99:329,0,1063	0/1:3,4:7:99:271,0,111
chr10	39602395	.	GTGTGCAACAGGAGTGCCA	G	4376.89	PASS	AB=0.997;AC=17;AF=0.304;AN=56;BaseQRankSum=13.548;DP=907;FS=1.468;HRun=0;HaplotypeScore=451.2806;InbreedingCoeff=0.3581;MQ=60.84;MQ0=5;MQRankSum=-8.178;QD=12.72;ReadPosRankSum=-1.979;VQSLOD=1.7453;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:38,3:41:5.25:508,5,0	1/1:5,0:5:12.04:458,12,0	0/0:28,0:23:54.16:0,54,1570	0/0:33,0:29:66.06:0,66,2036	0/0:19,0:19:53.84:0,54,2625	0/0:28,0:28:81.28:0,81,4617	0/0:35,0:35:81.28:0,81,4296	0/1:53,0:48:99:476,0,1384	0/0:38,0:38:99:0,102,4854	1/1:19,0:19:18.33:529,18,0	1/1:8,0:8:11.88:128,12,0	0/0:43,0:43:99:0,108,5683	0/0:34,0:34:96.28:0,96,4386	0/0:44,0:44:99:0,117,5866	0/0:39,0:39:99:0,105,6095	0/0:26,0:26:60.19:0,60,3817	0/0:39,0:38:99:0,99,4833	1/1:13,0:13:8.98:277,9,0	0/1:42,0:38:99:351,0,1419	0/1:43,0:43:48.86:49,0,1954	0/0:75,0:66:99:0,103,3791	0/0:24,0:24:66.21:0,66,3155	0/0:24,0:24:57.14:0,57,2670	0/0:33,0:33:84.29:0,84,4706	0/1:35,0:35:99:256,0,2495	0/1:52,1:52:99:897,0,2855	0/1:24,0:23:99:207,0,1260	0/1:8,0:8:99:242,0,115
chr10	39602432	.	TGTGCAACAGGA	T	1133.09	PASS	AB=0.860;AC=11;AF=0.196;AN=56;BaseQRankSum=8.480;DP=799;FS=0.000;HRun=0;HaplotypeScore=310.8265;InbreedingCoeff=0.1214;MQ=63.44;MQ0=4;MQRankSum=-6.829;QD=7.17;ReadPosRankSum=0.635;VQSLOD=1.8191;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:25,4:29:99:150,0,513	0/1:5,2:7:17.79:151,0,18	0/0:30,0:19:44.25:0,44,1660	0/0:28,0:20:48.39:0,48,1697	0/0:16,0:16:48.16:0,48,2361	0/0:28,0:28:84.25:0,84,4084	0/0:40,0:40:99:0,120,5586	0/0:26,0:23:4.62:0,5,924	0/0:40,0:40:99:0,120,6019	0/1:8,3:11:99:224,0,111	1/1:4,2:6:5.23:67,5,0	0/0:41,0:41:99:0,123,6222	0/0:36,0:36:99:0,108,4935	0/0:48,0:48:99:0,144,7097	0/0:37,0:37:99:0,111,5325	0/0:28,0:28:84.29:0,84,4050	0/0:38,0:38:99:0,114,5630	1/1:11,3:14:4.57:293,5,0	0/0:25,0:24:24.46:0,24,1385	0/0:35,2:36:51.49:0,51,2271	0/0:61,0:52:99:0,129,5001	0/0:25,0:25:75.24:0,75,3665	0/0:22,0:22:60.19:0,60,2868	0/0:35,0:35:99:0,105,4494	0/1:27,1:27:6.64:7,0,2611	0/1:42,3:45:99:156,0,3361	0/1:12,2:14:99:165,0,1146	0/1:3,1:4:66.34:66,0,78
chr10	39602448	.	CATGTGCA	C	618.36	PASS	AB=0.827;AC=8;AF=0.143;AN=56;BaseQRankSum=7.550;DP=753;FS=0.000;HRun=0;HaplotypeScore=225.6104;InbreedingCoeff=-0.1656;MQ=60.78;MQ0=9;MQRankSum=-7.407;QD=5.03;ReadPosRankSum=2.391;VQSLOD=1.8504;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:27,4:31:68.80:69,0,386	0/1:6,2:8:86.80:87,0,111	0/0:31,0:13:36.59:0,37,1117	0/0:34,0:19:53.71:0,54,1422	0/0:18,0:18:51.17:0,51,2079	0/0:29,0:29:87.26:0,87,3340	0/0:50,0:50:99:0,150,5475	0/0:9,0:6:15.04:0,15,382	0/0:46,0:46:99:0,138,5464	0/1:10,3:13:99:150,0,130	0/1:4,2:6:17.91:23,0,18	0/0:44,0:44:99:0,132,5068	0/0:35,0:35:99:0,105,4192	0/0:47,0:47:99:0,141,5638	0/0:38,0:38:99:0,114,4271	0/0:27,0:27:78.27:0,78,2897	0/0:35,0:35:99:0,105,4166	0/1:11,3:14:14.91:210,0,15	0/0:12,0:10:9.39:0,9,575	0/0:26,2:27:33.16:0,33,1413	0/0:52,0:44:87.30:0,87,2715	0/0:22,0:22:66.23:0,66,2650	0/0:19,0:19:57.20:0,57,2301	0/0:32,0:32:93.30:0,93,3625	0/0:21,1:21:3.43:0,3,1550	0/1:31,3:34:86.43:86,0,2185	0/1:12,2:14:92.39:92,0,721	0/1:2,1:3:35.94:36,0,95
chr10	39603217	.	G	GCGT	23315.97	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=4.601;DP=786;FS=1.876;HRun=0;HaplotypeScore=127.2188;InbreedingCoeff=0.9992;MQ=91.58;MQ0=0;MQRankSum=-14.155;QD=55.38;ReadPosRankSum=-0.616;VQSLOD=6.1988;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,43:51:99:2550,111,0	1/1:1,16:17:42.14:990,42,0	0/0:40,0:40:99:0,111,1800	0/0:32,0:32:86.01:0,86,1486	0/0:40,0:40:99:0,114,1992	0/0:27,0:27:75.24:0,75,1291	0/0:21,0:21:63.18:0,63,1039	1/1:5,32:40:99:2483,114,0	0/0:26,0:26:75.26:0,75,1310	1/1:1,29:31:90.30:2073,90,0	1/1:3,16:19:39.13:899,39,0	1/1:3,25:29:81.27:1806,81,0	0/0:26,0:26:75.25:0,75,1286	0/0:36,0:36:99:0,108,1872	0/0:31,0:31:90.31:0,90,1585	0/0:26,0:26:69.24:0,69,1217	0/0:25,0:25:75.26:0,75,1304	1/1:0,7:7:21.07:427,21,0	1/1:2,20:24:72.18:1468,72,0	1/1:2,19:21:44.86:1040,45,0	1/1:4,35:40:87.29:1913,87,0	0/0:35,0:35:99:0,102,1794	1/1:0,26:27:60.12:1416,60,0	1/1:4,29:33:56.75:1308,57,0	1/1:2,11:13:27.09:547,27,0	1/1:2,36:38:99:2556,111,0	1/1:1,18:19:45.15:1061,45,0	1/1:0,10:12:33.11:779,33,0
chr10	39603556	.	TCCCCTCTCCCTTCCC	T	1605.48	PASS	AB=1.000;AC=10;AF=0.185;AN=54;BaseQRankSum=4.646;DP=253;FS=0.000;HRun=0;HaplotypeScore=77.0448;InbreedingCoeff=0.4922;MQ=77.79;MQ0=5;MQRankSum=-3.485;QD=25.89;ReadPosRankSum=1.628;VQSLOD=1.7018;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:6,19:25:21.03:802,21,0	1/1:0,5:5:6.02:220,6,0	0/0:49,0:13:29.91:0,30,440	0/0:46,0:22:8.99:0,9,183	0/0:5,0:5:12.03:0,12,259	0/0:1,0:1:3.01:0,3,221	0/0:7,0:6:18.03:0,18,552	0/0:6,0:6:12.04:0,12,412	0/0:7,0:7:21.04:0,21,755	1/1:0,7:7:11.99:442,12,0	./.	0/1:6,0:6:15.83:16,0,63	0/0:4,0:4:5.99:0,6,117	0/0:6,0:6:15.04:0,15,516	0/0:7,0:7:11.87:0,12,450	0/0:7,0:7:18.03:0,18,781	0/0:3,0:3:6.02:0,6,203	1/1:1,10:11:6.02:257,6,0	0/0:4,0:4:9.03:0,9,269	0/0:4,0:4:9.03:0,9,376	0/0:4,0:4:12.04:0,12,511	0/0:9,0:9:24.06:0,24,734	0/0:3,0:3:2.10:0,2,37	0/1:8,0:8:17.84:18,0,93	0/0:5,0:5:12.04:0,12,736	0/0:6,0:6:18.05:0,18,516	0/0:3,0:3:6.02:0,6,267	0/0:3,0:3:6.01:0,6,71
chr10	39603567	.	TTCC	T	219.13	PASS	AB=1.000;AC=13;AF=0.241;AN=54;BaseQRankSum=6.029;DP=210;FS=5.088;HRun=0;HaplotypeScore=36.9050;InbreedingCoeff=0.5060;MQ=81.98;MQ0=6;MQRankSum=-3.592;QD=4.21;ReadPosRankSum=4.151;VQSLOD=0.8053;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:21:2.36:103,2,0	0/1:5,0:5:4.26:6,0,4	0/0:42,0:12:8.34:0,8,283	0/0:44,0:19:2.82:0,3,66	0/0:5,0:5:15.02:0,15,215	0/0:1,0:1:3.01:0,3,74	0/0:7,0:6:17.73:0,18,336	0/0:4,0:4:12.03:0,12,246	0/0:5,0:5:15.05:0,15,324	1/1:7,0:7:2.30:53,2,0	./.	1/1:0,4:4:3.01:55,3,0	0/0:1,0:1:3.01:0,3,71	0/0:4,0:4:12.03:0,12,245	0/0:3,0:3:9.02:0,9,173	0/0:4,0:4:12.04:0,12,283	0/0:3,0:3:9.03:0,9,150	1/1:10,0:10:5.88:36,6,0	0/0:3,0:3:9.02:0,9,172	0/0:3,0:3:9.02:0,9,171	0/0:6,0:6:18.06:0,18,400	0/0:8,0:8:24.03:0,24,396	1/1:1,0:1:3.01:47,3,0	1/1:0,4:4:3.01:56,3,0	0/0:4,0:4:12.04:0,12,295	0/0:5,0:5:15.04:0,15,253	0/0:2,0:2:6.02:0,6,147	0/0:1,0:1:2.99:0,3,24
chr10	39603773	.	C	CGGGGGAG	1405.06	PASS	AC=8;AF=0.154;AN=52;BaseQRankSum=2.533;DP=378;FS=8.840;HRun=0;HaplotypeScore=103.9405;InbreedingCoeff=0.8177;MQ=89.02;MQ0=0;MQRankSum=-5.541;QD=46.84;ReadPosRankSum=0.599;VQSLOD=2.6803;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,0:6:2.96:19,3,0	./.	0/0:15,0:15:38.92:0,39,686	0/0:18,0:18:14.30:0,14,525	0/0:14,0:14:33.08:0,33,698	0/0:20,0:20:51.17:0,51,1210	0/0:21,0:21:60.12:0,60,1343	0/0:13,0:13:23.58:0,24,321	0/0:25,0:25:66.11:0,66,1541	0/0:7,0:7:4.75:0,5,68	./.	0/0:19,0:19:54.14:0,54,1147	1/1:0,10:11:24.08:927,24,0	1/1:0,7:7:12.04:464,12,0	0/0:20,0:20:51.14:0,51,1176	0/0:17,0:17:48.13:0,48,1148	0/0:25,0:25:60.01:0,60,1248	1/1:1,0:6:9.03:134,9,0	0/0:14,0:14:26.97:0,27,516	0/0:6,0:6:12.02:0,12,250	0/0:32,0:32:78.12:0,78,1786	0/0:10,0:10:27.06:0,27,622	0/0:3,0:3:6:0,6,99	0/0:20,0:20:48.13:0,48,1107	0/0:15,0:15:42.12:0,42,950	0/0:16,0:16:42.14:0,42,1028	0/0:14,0:14:42.13:0,42,1000	0/0:3,0:3:6.02:0,6,150
chr10	39604314	.	TCA	T	687.42	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=1.530;DP=276;FS=0.732;HRun=0;HaplotypeScore=60.7525;InbreedingCoeff=0.8434;MQ=72.79;MQ0=1;MQRankSum=-4.566;QD=8.93;ReadPosRankSum=-1.527;VQSLOD=2.5812;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:84.24:0,84,1623	0/0:5,0:5:15.04:0,15,254	0/0:3,0:3:9:0,9,78	0/0:10,0:9:17.84:0,18,130	0/0:5,0:5:15.05:0,15,285	0/0:14,0:14:39.07:0,39,641	0/0:7,0:7:6.61:0,7,202	1/1:25,0:25:22.97:168,23,0	0/0:7,0:7:21.04:0,21,354	0/0:13,0:13:33.06:0,33,560	0/0:10,0:10:27.05:0,27,438	0/0:4,0:4:6.02:0,6,122	0/0:6,0:6:17.93:0,18,248	0/0:6,0:6:15.05:0,15,303	0/0:6,0:6:15.02:0,15,220	0/0:6,0:6:18.03:0,18,293	0/0:18,0:18:54.15:0,54,1012	0/0:22,0:22:60.11:0,60,1018	1/1:5,0:5:8.53:73,9,0	1/1:5,1:6:11.99:102,12,0	1/1:6,0:6:5.96:44,6,0	0/0:1,0:1:3.01:0,3,61	0/0:9,0:9:26.98:0,27,402	0/0:14,0:14:42.10:0,42,740	1/1:6,1:7:6:57,6,0	1/1:9,2:11:16.42:159,16,0	1/1:8,0:8:6.51:36,7,0	1/1:7,2:9:26.98:237,27,0
chr10	39604326	.	ATG	A	215.38	PASS	AB=0.750;AC=16;AF=0.286;AN=56;BaseQRankSum=4.759;DP=219;FS=2.071;HRun=0;HaplotypeScore=57.9631;InbreedingCoeff=0.6594;MQ=62.23;MQ0=1;MQRankSum=-5.350;QD=4.14;ReadPosRankSum=-0.519;VQSLOD=1.4990;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:81.16:0,81,1342	0/0:6,0:6:18.01:0,18,243	1/1:2,0:1:1.55:4,2,0	0/0:5,0:4:1.82:0,2,5	0/0:5,0:5:15.03:0,15,253	0/0:10,0:10:27.08:0,27,485	0/1:4,0:4:1.41:1,0,85	1/1:20,0:20:16.84:98,17,0	0/0:5,0:5:15.05:0,15,288	0/0:12,0:12:35.95:0,36,552	0/0:7,0:7:18.04:0,18,311	0/0:5,0:5:9.02:0,9,140	0/0:3,0:3:9.03:0,9,164	0/0:6,0:6:15.03:0,15,255	0/0:4,0:4:6.02:0,6,106	0/0:4,0:4:12.04:0,12,231	0/0:20,0:20:51.14:0,51,893	0/0:21,0:21:32.99:0,33,827	1/1:4,0:3:2.97:20,3,0	0/1:0,1:1:0:0,0,0	0/0:4,0:4:0:0,0,0	0/0:1,0:1:3.01:0,3,58	0/0:5,0:5:12.01:0,12,163	0/0:11,0:11:33.01:0,33,506	1/1:3,1:4:3:27,3,0	1/1:4,2:6:11.97:102,12,0	1/1:8,0:8:6.31:40,6,0	1/1:1,2:3:9:79,9,0
chr10	39604332	.	ATATATGTGTATATATATATG	A	734.53	PASS	AB=1.000;AC=14;AF=0.259;AN=54;BaseQRankSum=4.791;DP=209;FS=2.985;HRun=0;HaplotypeScore=124.6121;InbreedingCoeff=0.5469;MQ=62.32;MQ0=1;MQRankSum=-3.297;QD=16.32;ReadPosRankSum=1.064;VQSLOD=2.5513;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:66.23:0,66,2881	0/0:5,0:5:15.05:0,15,662	0/0:2,0:1:3.01:0,3,34	0/1:5,0:4:13.58:14,0,14	0/0:6,0:6:14.36:0,14,785	0/0:9,0:9:24.08:0,24,1376	0/0:3,0:3:3.01:0,3,271	1/1:17,0:17:3.01:40,3,0	0/0:5,0:5:15.05:0,15,613	0/0:11,0:11:33.10:0,33,1527	0/0:7,0:7:15.05:0,15,677	0/0:5,0:5:9.03:0,9,260	0/0:5,0:5:15.05:0,15,1094	0/0:5,0:5:12.04:0,12,769	0/0:4,0:4:9.02:0,9,199	0/0:4,0:4:12.04:0,12,607	0/0:23,0:23:60.18:0,60,3240	0/0:21,0:21:51.04:0,51,2119	0/1:4,0:3:0:0,0,0	1/1:0,1:1:3.01:43,3,0	./.	0/0:1,0:1:3.01:0,3,84	0/0:5,0:5:6.02:0,6,273	0/0:9,0:9:24.07:0,24,925	1/1:2,1:3:3.01:151,3,0	1/1:3,2:5:6.02:303,6,0	1/1:8,0:8:3:25,3,0	1/1:0,2:2:6.02:303,6,0
chr10	39604352	.	GTATA	G	1201.72	PASS	AB=1.000;AC=13;AF=0.260;AN=50;BaseQRankSum=-2.100;DP=192;FS=1.718;HRun=0;HaplotypeScore=53.7082;InbreedingCoeff=0.4419;MQ=60.72;MQ0=2;MQRankSum=-0.222;QD=16.02;ReadPosRankSum=3.883;VQSLOD=2.8865;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,19:23:33.11:582,33,0	1/1:6,0:6:9.03:104,9,0	0/0:6,0:3:5.98:0,6,63	0/0:4,0:3:5.81:0,6,45	0/0:6,0:6:8.71:0,9,88	0/0:4,0:11:15.02:0,15,230	0/0:3,0:3:6.02:0,6,122	0/0:15,0:15:29.01:0,29,362	0/0:1,0:3:3.01:0,3,53	1/1:10,0:10:21:215,21,0	0/1:4,0:4:10.96:28,0,11	0/0:0,0:4:2.74:0,3,12	0/0:5,0:5:15.05:0,15,201	0/0:5,0:5:9.03:0,9,126	0/0:2,0:2:3.01:0,3,34	0/0:5,0:5:8.28:0,8,150	0/0:23,0:23:57.17:0,57,681	1/1:18,0:18:27.08:319,27,0	0/0:8,0:6:9.81:0,10,73	0/0:5,0:4:3.01:0,3,32	./.	./.	0/0:0,0:5:5.49:0,5,24	0/0:1,0:6:8.23:0,8,35	0/1:3,0:3:16.95:19,0,17	1/1:6,0:6:6.43:52,6,0	./.	0/1:5,0:4:26.73:41,0,27
chr10	39604362	.	A	AT	554	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=-2.342;DP=226;FS=0.881;HRun=1;HaplotypeScore=49.5569;InbreedingCoeff=0.4059;MQ=58.98;MQ0=3;MQRankSum=1.793;QD=10.26;ReadPosRankSum=0.857;VQSLOD=1.4366;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:35.48:0,35,197	0/0:0,0:6:6.11:0,6,17	0/1:7,0:4:0.17:0,0,77	0/1:5,0:2:6.06:6,0,11	1/1:3,7:8:5.75:64,6,0	0/0:11,0:11:11.45:0,11,150	0/0:4,0:4:5.96:0,6,59	0/0:20,0:20:60.15:0,60,739	0/0:5,0:5:5.82:0,6,75	0/0:1,0:8:18.24:0,18,105	0/0:0,0:5:2.04:0,2,6	0/0:6,0:6:2.63:0,3,11	0/0:5,0:5:15.05:0,15,183	0/0:5,0:5:11.93:0,12,129	1/1:0,3:3:3.01:32,3,0	0/0:8,0:8:11.42:0,11,60	1/1:3,25:28:44.07:574,44,0	0/0:0,0:16:18.11:0,18,50	0/0:8,0:7:1.09:0,1,147	0/0:5,0:4:3:0,3,27	0/0:4,0:4:6.02:0,6,76	0/1:1,0:1:0:0,0,0	0/0:7,0:7:8.37:0,8,60	0/0:7,0:7:14.05:0,14,108	0/0:3,0:3:6.01:0,6,67	0/0:8,0:8:17.63:0,18,195	0/0:3,0:2:3.01:0,3,38	0/0:5,0:4:9.02:0,9,97
chr10	39604721	.	CCTCTCTCTCTCTCT	C	2563.96	PASS	AB=0.728;AC=22;AF=0.407;AN=54;BaseQRankSum=2.903;DP=585;FS=0.996;HRun=0;HaplotypeScore=205.4915;InbreedingCoeff=0.6248;MQ=69.68;MQ0=27;MQRankSum=-3.189;QD=11.82;ReadPosRankSum=0.302;VQSLOD=2.5928;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:45:39.13:0,39,2006	0/0:8,0:7:4.37:0,4,128	0/0:43,0:22:10.93:0,11,140	0/0:68,0:37:25.67:0,26,543	1/1:14,0:15:0.94:2,1,0	0/0:14,0:13:9.03:0,9,422	0/0:15,0:14:17.29:0,17,598	1/1:19,0:18:4.16:78,4,0	0/0:18,0:17:11.96:0,12,418	0/0:21,0:19:30.98:0,31,1390	./.	0/0:18,0:18:18.95:0,19,674	0/0:12,0:12:16.28:0,16,682	0/0:27,0:27:28.02:0,28,1235	1/1:12,6:18:9.95:217,10,0	1/1:13,9:22:13.74:414,14,0	1/1:22,2:22:12.03:344,12,0	0/0:16,0:15:26.12:0,26,1165	1/1:20,7:28:19.62:779,20,0	1/1:3,9:14:0.47:1,0,0	1/1:22,8:30:3.89:58,4,0	0/1:7,4:11:13.97:52,0,14	0/0:26,0:23:14.49:0,14,615	0/0:17,0:15:14.31:0,14,674	0/0:5,3:6:3:0,3,26	1/1:8,5:13:15.05:579,15,0	1/1:5,5:9:3.01:116,3,0	0/1:6,3:6:99:104,0,134
chr10	39604747	.	TCTCTCTCTCTCTCTCACACACACACACACA	T	3816.62	PASS	AB=1.000;AC=18;AF=0.321;AN=56;BaseQRankSum=4.371;DP=543;FS=0.000;HRun=0;HaplotypeScore=250.7112;InbreedingCoeff=0.0633;MQ=40.30;MQ0=46;MQRankSum=-4.116;QD=14.46;ReadPosRankSum=1.188;VQSLOD=2.3702;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:50:40.49:0,40,2231	0/0:8,0:7:5.61:0,6,132	0/0:17,0:4:10.93:0,11,140	0/0:31,0:13:24.63:0,25,536	1/1:9,10:19:2.24:5,2,0	0/1:14,0:13:99:135,0,407	0/0:15,0:13:18.59:0,19,601	0/1:16,0:10:11.12:72,0,11	0/1:27,0:26:99:311,0,527	0/0:17,0:14:33.99:0,34,1563	0/0:7,0:6:0.89:0,1,2	0/1:19,0:19:99:104,0,848	0/0:16,0:16:27.14:0,27,1685	0/0:23,0:22:31.09:0,31,2025	1/1:22,0:19:12:344,12,0	1/1:24,0:22:19.56:846,20,0	1/1:25,0:23:14.97:606,15,0	0/0:12,0:11:5.68:0,6,1229	0/1:10,0:9:99:673,0,328	0/0:21,0:16:2.93:0,3,223	0/1:30,0:26:38.83:39,0,718	0/1:17,0:16:14.90:51,0,15	0/0:30,0:27:14.76:0,15,632	0/0:22,0:18:14.04:0,14,673	0/0:8,0:6:3:0,3,26	0/1:16,0:14:99:429,0,916	0/1:14,0:13:99:104,0,486	0/1:11,0:8:97.64:98,0,408
chr10	39604749	.	TCTCTCTCTCTCTCACACACACACACACACA	T	3119.27	PASS	AB=1.000;AC=20;AF=0.370;AN=54;BaseQRankSum=5.399;DP=529;FS=5.463;HRun=0;HaplotypeScore=242.7237;InbreedingCoeff=0.0536;MQ=37.06;MQ0=46;MQRankSum=-3.321;QD=11.47;ReadPosRankSum=1.839;VQSLOD=2.3225;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:51:40.49:0,40,1967	0/0:8,0:7:5.61:0,6,106	0/0:14,0:3:5.61:0,6,76	0/0:27,0:11:24.64:0,25,403	1/1:18,0:18:1.36:3,1,0	0/1:14,0:13:98.47:98,0,335	0/0:15,0:13:18.37:0,18,476	0/1:18,0:12:70.72:71,0,104	0/1:27,0:26:99:272,0,452	0/0:17,0:14:27.98:0,28,1318	0/0:6,0:5:0.89:0,1,2	0/1:19,0:19:99:110,0,751	0/0:14,0:14:23.73:0,24,1563	0/0:22,0:21:28.89:0,29,1876	1/1:21,0:18:10.24:260,10,0	1/1:22,0:20:18.06:755,18,0	1/1:10,16:24:12.04:600,12,0	0/1:12,0:11:15.43:15,0,1030	0/1:10,0:9:99:523,0,337	0/0:22,0:17:3.46:0,3,248	0/1:29,0:25:21:21,0,803	1/1:17,0:16:2.08:34,2,0	0/0:29,0:26:15.34:0,15,515	0/0:22,0:18:14.03:0,14,548	./.	0/1:16,0:14:99:346,0,1074	0/1:14,0:13:85.16:85,0,553	0/1:9,0:6:89.68:90,0,427
chr10	39604761	.	TCACACACACACACACA	T	1594.02	PASS	AB=0.816;AC=18;AF=0.360;AN=50;BaseQRankSum=4.009;DP=468;FS=2.177;HRun=0;HaplotypeScore=175.5099;InbreedingCoeff=0.4020;MQ=35.09;MQ0=41;MQRankSum=-1.128;QD=8.26;ReadPosRankSum=0.685;VQSLOD=2.7131;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:46:5.87:0,6,36	./.	./.	./.	1/1:17,0:18:0.47:1,0,0	1/1:9,2:9:5.98:150,6,0	1/1:12,0:10:2.97:20,3,0	0/0:16,0:13:15.04:0,15,350	1/1:19,4:23:11.45:428,11,0	0/1:12,0:14:20.59:70,0,21	0/0:6,0:5:0.47:0,0,1	0/1:9,0:15:19.32:148,0,19	0/0:14,0:14:13.76:0,14,804	0/0:20,0:19:15.99:0,16,790	0/1:14,7:18:1.74:124,0,2	1/1:15,7:21:14.96:434,15,0	1/1:23,0:21:8.70:248,9,0	0/1:10,0:9:8.07:116,0,8	0/0:13,0:11:14.05:0,14,479	0/0:26,0:20:2.82:0,3,199	0/0:37,0:31:14.28:0,14,693	0/0:9,5:16:0.47:0,0,1	0/0:16,0:19:0.47:0,0,1	1/1:19,0:16:0.47:1,0,0	0/0:8,0:6:3.01:0,3,200	0/0:21,0:18:33.09:0,33,1359	0/0:15,0:14:11.32:0,11,458	0/0:9,0:6:6.02:0,6,262
chr10	39606014	.	G	GTA	5258.16	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=5.564;DP=683;FS=5.887;HRun=0;HaplotypeScore=125.4312;InbreedingCoeff=0.9970;MQ=79.25;MQ0=1;MQRankSum=-1.275;QD=43.10;ReadPosRankSum=3.918;VQSLOD=5.9420;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:87.30:0,87,1326	0/0:7,0:7:21.07:0,21,321	0/0:29,0:29:74.61:0,75,964	0/0:27,0:25:52.90:0,53,627	1/1:0,24:24:54.18:1041,54,0	0/0:24,0:24:72.22:0,72,1058	0/0:24,0:24:69.20:0,69,1010	0/0:35,0:35:99:0,105,1464	0/0:36,0:36:99:0,108,1543	0/0:29,0:29:87.23:0,87,1277	0/0:16,0:16:48.16:0,48,732	0/0:28,0:28:81.28:0,81,1236	0/0:20,0:20:54.15:0,54,777	0/0:27,0:27:81.25:0,81,1194	1/1:2,27:31:66.23:1272,66,0	1/1:3,19:22:32.23:1017,32,0	1/1:2,29:31:72.19:1349,72,0	0/0:17,0:17:51.17:0,51,779	0/0:25,0:25:75.17:0,75,1006	0/0:20,0:20:60.16:0,60,851	0/0:37,0:37:99:0,108,1540	1/1:0,14:14:30.10:579,30,0	0/0:13,0:13:39.12:0,39,575	0/0:28,0:28:84.20:0,84,1193	0/0:15,0:15:45.11:0,45,625	0/0:32,0:32:93.29:0,93,1350	0/0:37,0:37:99:0,111,1636	0/0:6,0:6:18.01:0,18,242
chr10	39606335	.	A	ATG	4204.91	PASS	AB=0.670;AC=11;AF=0.196;AN=56;BaseQRankSum=-10.663;DP=667;FS=7.891;HRun=0;HaplotypeScore=79.7072;InbreedingCoeff=0.4535;MQ=69.91;MQ0=2;MQRankSum=-0.873;QD=22.61;ReadPosRankSum=-1.890;VQSLOD=3.1800;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:87.09:0,87,1011	0/0:11,0:12:32.93:0,33,381	0/1:23,0:18:4.74:5,0,138	0/0:7,0:5:6.01:0,6,64	0/0:30,0:31:34.74:0,35,824	0/0:23,0:23:38.41:0,38,462	0/0:32,0:32:75.18:0,75,886	1/1:10,11:21:20.23:522,20,0	0/0:23,0:23:63.16:0,63,744	0/0:29,0:29:66.16:0,66,779	0/0:25,0:26:63.02:0,63,735	0/0:16,0:16:44.97:0,45,527	0/0:16,0:17:41.95:0,42,479	0/0:27,0:30:71.89:0,72,833	0/0:22,0:23:59.93:0,60,656	0/0:23,0:24:63.03:0,63,747	0/0:25,0:27:71.85:0,72,807	0/0:19,0:20:47.92:0,48,521	1/1:5,19:23:20.41:773,20,0	0/0:28,0:28:72.06:0,72,858	1/1:6,16:22:6.46:595,6,0	0/0:18,0:19:44.93:0,45,500	0/0:20,0:20:48.11:0,48,569	0/0:38,0:38:99:0,102,1232	0/1:9,14:24:6.56:407,0,7	0/1:10,16:26:88.39:694,0,88	0/1:6,20:27:8.74:533,0,9	0/1:3,16:19:22.13:676,0,22
chr10	39606985	.	C	CT	2198.79	PASS	AB=0.757;AC=9;AF=0.161;AN=56;BaseQRankSum=-8.059;DP=608;FS=3.132;HRun=11;HaplotypeScore=75.3623;InbreedingCoeff=0.6440;MQ=74.31;MQ0=1;MQRankSum=-0.553;QD=14.37;ReadPosRankSum=-1.037;VQSLOD=3.8670;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:2,0:17:27.43:0,27,94	0/0:1,0:10:16.29:0,16,47	0/0:17,0:18:11.56:0,12,182	0/0:10,0:11:9.06:0,9,86	1/1:11,27:39:66.26:613,66,0	0/0:23,0:23:47.75:0,48,371	0/0:18,0:19:43.84:0,44,331	0/0:38,0:41:64.63:0,65,452	0/0:12,0:12:23.88:0,24,185	0/0:7,0:37:53.47:0,53,160	0/0:3,0:20:30.53:0,31,88	0/0:19,0:19:11.44:0,11,269	0/0:14,0:16:30.94:0,31,220	0/0:14,0:14:32.87:0,33,255	1/1:2,17:20:38.91:380,39,0	0/1:9,6:15:10.32:247,0,10	0/1:7,28:35:8.58:647,0,9	0/0:2,0:15:22.08:0,22,64	0/0:18,0:19:52.83:0,53,398	0/0:31,0:32:67.68:0,68,511	0/1:19,0:19:1.54:2,0,185	1/1:7,18:25:48.02:465,48,0	0/0:22,0:23:55.80:0,56,424	0/0:14,0:14:35.84:0,36,279	0/0:20,0:20:44.78:0,45,344	0/0:38,1:40:49.17:0,49,555	0/0:25,0:27:67.74:0,68,517	0/0:7,0:7:11.92:0,12,93
chr10	39607128	.	TG	T	5757.34	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-4.463;DP=525;FS=3.418;HRun=9;HaplotypeScore=69.1958;InbreedingCoeff=0.9605;MQ=78.43;MQ0=0;MQRankSum=-0.483;QD=22.40;ReadPosRankSum=2.779;VQSLOD=5.9076;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:21:22.73:0,23,115	0/0:3,0:9:14.20:0,14,72	0/0:19,0:16:17.46:0,17,223	0/0:15,0:15:14.35:0,14,116	1/1:2,19:21:51.02:467,51,0	0/0:28,1:29:25.99:0,26,705	0/0:18,0:18:48.14:0,48,554	1/1:1,28:29:84.01:757,84,0	0/0:15,0:15:39.10:0,39,440	0/0:8,0:22:49.08:0,49,299	0/0:5,0:15:20.05:0,20,122	0/0:9,0:22:22.98:0,23,139	0/0:4,0:16:19.87:0,20,111	0/0:7,0:22:34.45:0,34,205	1/1:2,23:25:63.03:576,63,0	1/1:4,9:13:30:270,30,0	1/1:1,16:19:46.10:396,46,0	0/0:8,0:16:23.02:0,23,131	1/1:3,16:19:48.02:439,48,0	1/1:5,20:25:57.01:521,57,0	1/1:1,8:9:18.01:165,18,0	1/1:2,15:18:38.05:335,38,0	0/0:6,0:12:11.22:0,11,58	0/0:1,0:17:31.25:0,31,159	1/1:1,14:15:36.02:329,36,0	1/1:3,25:28:75.01:677,75,0	1/1:0,31:31:87.05:796,87,0	1/1:0,5:5:3:27,3,0
chr10	39607448	.	AT	A	5408.64	PASS	AB=0.977;AC=18;AF=0.321;AN=56;BaseQRankSum=11.397;DP=572;FS=2.074;HRun=2;HaplotypeScore=58.5171;InbreedingCoeff=0.8890;MQ=72.23;MQ0=0;MQRankSum=0.778;QD=29.56;ReadPosRankSum=1.286;VQSLOD=4.5081;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,27:27:72.23:935,72,0	1/1:0,9:9:27.09:351,27,0	0/1:12,0:8:0.45:1,0,0	0/1:19,1:15:13.90:14,0,80	0/0:21,0:21:63.21:0,63,939	1/1:1,16:17:48.16:623,48,0	1/1:0,13:13:39.13:505,39,0	0/0:38,0:38:99:0,111,1640	1/1:1,16:17:42.14:545,42,0	1/1:1,20:21:60.17:760,60,0	1/1:1,22:23:66.21:857,66,0	0/0:24,0:24:72.24:0,72,1069	0/0:23,0:23:66.22:0,66,989	0/0:14,0:14:42.13:0,42,605	0/0:18,0:18:54.17:0,54,789	0/0:22,0:22:66.22:0,66,989	0/0:20,0:20:60.17:0,60,859	1/1:0,22:21:63.20:818,63,0	0/0:12,0:12:33.11:0,33,477	0/0:32,0:32:96.32:0,96,1425	0/0:25,0:25:75.25:0,75,1104	0/0:5,0:5:15.05:0,15,225	0/0:20,0:20:57.15:0,57,824	0/0:21,0:21:63.21:0,63,934	0/0:17,0:17:51.14:0,51,709	0/0:32,0:32:69.62:0,70,1353	0/0:29,0:28:87.29:0,87,1282	0/0:16,0:16:48.15:0,48,699
chr10	39610308	.	ATT	A	3115.07	PASS	AB=0.619;AC=36;AF=0.643;AN=56;BaseQRankSum=0.105;DP=475;FS=0.908;HRun=15;HaplotypeScore=76.3884;InbreedingCoeff=0.6550;MQ=59.44;MQ0=13;MQRankSum=-1.608;QD=9.22;ReadPosRankSum=3.439;VQSLOD=1.7558;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:7,1:27:18.99:0,19,121	0/1:4,1:9:15.49:16,0,15	0/0:10,0:6:1.61:0,2,35	0/0:10,0:6:6:0,6,55	1/1:5,0:18:31.97:134,32,0	1/1:2,6:9:11.59:135,12,0	1/1:4,13:20:32.23:303,32,0	1/1:10,17:29:34.92:345,35,0	1/1:6,7:16:29.38:234,29,0	0/1:4,2:18:16.39:16,0,84	0/1:5,1:12:10.67:11,0,68	0/0:9,0:20:35.78:0,36,187	0/0:16,0:19:32.61:0,33,477	0/0:12,0:12:22.97:0,23,209	1/1:5,0:24:41.13:177,41,0	1/1:2,0:11:24.69:106,25,0	1/1:5,0:20:35.65:153,36,0	0/1:8,1:17:1.97:2,0,109	1/1:2,10:13:20.83:229,21,0	1/1:5,14:20:26.34:311,26,0	1/1:4,10:12:23.97:211,24,0	1/1:3,0:20:35.63:153,36,0	0/0:8,0:17:10.62:0,11,89	0/0:6,0:16:29.94:0,30,104	1/1:5,9:15:7.35:165,7,0	1/1:7,12:19:29.60:249,30,0	1/1:3,12:17:17.80:203,18,0	1/1:0,7:7:18:159,18,0
chr10	39610793	.	T	TG	5334.99	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=15.999;DP=750;FS=10.369;HRun=1;HaplotypeScore=113.2331;InbreedingCoeff=0.9989;MQ=75.89;MQ0=0;MQRankSum=-10.826;QD=37.57;ReadPosRankSum=0.435;VQSLOD=3.7033;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,135,1751	0/0:15,0:15:45.15:0,45,584	0/0:29,0:29:41.19:0,41,961	0/0:21,0:20:48.63:0,49,624	1/1:6,30:36:69.51:1184,70,0	0/0:30,0:30:90.29:0,90,1167	0/0:21,0:21:63.19:0,63,803	0/0:37,0:37:99:0,105,1351	0/0:25,0:25:72.23:0,72,935	0/0:33,0:33:87.28:0,87,1127	0/0:12,0:12:36.12:0,36,467	0/0:24,0:24:72.23:0,72,932	0/0:25,0:25:75.23:0,75,959	0/0:21,0:21:60.18:0,60,765	1/1:3,30:32:93.27:1360,93,0	1/1:2,26:28:81.27:1210,81,0	1/1:5,10:15:30.74:464,31,0	0/0:20,0:20:57.18:0,57,730	0/0:23,0:23:66.21:0,66,844	0/0:24,0:24:69.20:0,69,874	0/0:29,0:29:87.28:0,87,1128	1/1:3,27:30:74.85:1117,75,0	0/0:33,0:33:96.30:0,96,1231	0/0:36,0:36:99:0,100,1319	0/0:24,0:24:69.22:0,69,895	0/0:35,0:35:99:0,105,1362	0/0:38,0:38:99:0,114,1467	0/0:7,0:7:21.07:0,21,273
chr10	39610806	.	T	TTTTG	7586.92	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=14.352;DP=736;FS=7.882;HRun=0;HaplotypeScore=144.7331;InbreedingCoeff=0.9927;MQ=72.80;MQ0=1;MQRankSum=-13.870;QD=50.92;ReadPosRankSum=-2.504;VQSLOD=5.1551;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,126,2142	0/0:16,0:16:36.10:0,36,567	0/0:30,0:28:48.58:0,49,737	0/0:24,0:21:45.06:0,45,679	1/1:12,19:32:69.24:1564,69,0	0/0:27,0:27:78.27:0,78,1347	0/0:21,0:21:57.19:0,57,982	0/0:40,0:41:80.58:0,81,1354	0/0:25,0:25:66.23:0,66,1145	0/0:28,0:28:66.22:0,66,1146	0/0:12,0:12:36.12:0,36,610	0/0:22,0:22:57.18:0,57,956	0/0:24,0:24:63.22:0,63,1078	0/0:20,0:20:48.15:0,48,809	1/1:6,28:34:81.28:2038,81,0	1/1:11,24:36:75.25:1831,75,0	1/1:4,13:19:29.77:759,30,0	0/0:21,0:21:54.18:0,54,939	0/0:19,0:19:39.13:0,39,671	0/0:20,0:20:51.17:0,51,888	0/0:30,0:30:81.28:0,81,1407	1/1:10,13:27:57.19:1395,57,0	0/0:30,0:30:78.25:0,78,1331	0/0:29,0:29:72.25:0,72,1244	0/0:20,0:20:51.17:0,51,881	0/0:38,0:38:99:0,105,1803	0/0:36,0:36:96.30:0,96,1630	0/0:5,0:5:12.04:0,12,209
chr10	39612540	.	GT	G	1814.60	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=5.827;DP=522;FS=2.242;HRun=7;HaplotypeScore=89.5944;InbreedingCoeff=0.9665;MQ=73.03;MQ0=1;MQRankSum=-3.230;QD=21.35;ReadPosRankSum=2.519;VQSLOD=3.4505;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:39.08:0,39,468	0/0:6,0:6:18.06:0,18,226	0/0:30,0:21:7.96:0,8,388	0/0:21,0:17:29.65:0,30,327	1/1:3,22:25:63.14:642,63,0	0/0:23,0:23:60.12:0,60,721	0/0:9,0:9:24.08:0,24,302	0/0:21,0:21:60.19:0,60,754	0/0:18,0:18:42.13:0,42,528	0/0:24,0:24:53.22:0,53,732	0/0:20,0:20:51.14:0,51,613	0/0:12,0:12:33.11:0,33,414	0/0:16,0:16:45.14:0,45,566	0/0:13,0:13:33.02:0,33,392	1/1:4,12:16:39.08:397,39,0	1/1:3,3:6:9.01:92,9,0	1/1:4,17:21:45.09:459,45,0	0/0:17,0:17:45.14:0,45,564	0/0:15,0:15:45.14:0,45,560	0/0:27,0:27:78.03:0,78,947	0/0:10,0:10:24.08:0,24,302	1/1:5,12:17:39.08:396,39,0	0/0:21,0:21:60.19:0,60,752	0/0:13,0:13:30.10:0,30,377	0/0:22,0:22:60.19:0,60,755	0/0:28,0:28:81.26:0,81,1019	0/0:28,0:28:69.22:0,69,860	0/0:26,0:26:66.02:0,66,730
chr10	39612547	.	TG	T	312.13	PASS	AB=0.981;AC=9;AF=0.161;AN=56;BaseQRankSum=6.598;DP=533;FS=2.798;HRun=1;HaplotypeScore=107.2669;InbreedingCoeff=0.5004;MQ=70.03;MQ0=1;MQRankSum=-2.157;QD=2.71;ReadPosRankSum=1.920;VQSLOD=-0.1032;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:44.87:0,45,483	0/0:6,0:6:18.05:0,18,229	0/1:31,2:22:14.26:14,0,350	0/0:19,4:17:13.89:0,14,316	1/1:26,0:26:25.45:170,25,0	0/0:22,0:22:65.47:0,65,846	0/0:11,0:11:27.48:0,27,335	0/0:23,0:23:69.16:0,69,866	0/0:16,0:16:45.08:0,45,597	0/0:23,0:23:30.75:0,31,699	0/0:18,0:18:53.75:0,54,586	0/0:14,0:14:39.08:0,39,478	0/0:19,0:19:57.13:0,57,701	0/0:15,0:15:41.83:0,42,493	1/1:16,0:16:1.15:81,1,0	1/1:3,0:3:7.06:25,7,0	0/1:20,0:20:22.68:79,0,23	0/0:16,0:16:45.13:0,45,561	0/0:16,0:16:48.12:0,48,619	0/0:29,0:29:87.17:0,87,1104	0/0:13,0:13:36.05:0,36,422	0/1:17,0:17:14.75:85,0,15	0/0:25,0:25:72.09:0,72,831	0/0:12,0:12:33.09:0,33,431	0/0:23,0:23:66.19:0,66,869	0/0:30,0:30:90.27:0,90,1188	0/0:23,0:23:69.18:0,69,886	0/0:23,0:23:68.99:0,69,802
chr10	39612555	.	GT	G	9171.17	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=1.313;DP=519;FS=1.063;HRun=9;HaplotypeScore=81.5978;InbreedingCoeff=0.9806;MQ=70.06;MQ0=1;MQRankSum=-1.316;QD=22.15;ReadPosRankSum=1.760;VQSLOD=5.6309;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,13:16:35.86:308,36,0	1/1:1,5:6:15.01:137,15,0	0/0:29,0:18:22.63:0,23,267	0/0:25,0:19:27.73:0,28,265	1/1:7,18:25:48.01:438,48,0	0/0:23,0:23:63.14:0,63,710	0/0:11,0:11:30.02:0,30,325	1/1:2,20:22:57:510,57,0	0/0:17,0:17:36.11:0,36,414	1/1:4,17:21:53.94:483,54,0	1/1:1,18:19:54.03:493,54,0	1/1:1,13:14:35.86:316,36,0	1/1:3,17:20:42.01:384,42,0	1/1:3,13:16:33.01:300,33,0	1/1:2,14:16:44.98:402,45,0	1/1:2,2:4:8.97:75,9,0	1/1:5,15:20:45.01:411,45,0	1/1:3,12:15:36.01:329,36,0	1/1:2,14:16:41.92:364,42,0	1/1:2,29:31:80.90:716,81,0	1/1:1,13:14:33.02:302,33,0	1/1:0,14:14:42.02:383,42,0	1/1:1,22:23:57.03:522,57,0	1/1:2,7:9:21.01:192,21,0	1/1:1,22:23:60.03:549,60,0	1/1:4,25:29:72.01:653,72,0	1/1:3,16:19:48.02:439,48,0	1/1:5,17:22:51.02:466,51,0
chr10	39612612	.	G	GATT	11885.69	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=17.564;DP=539;FS=7.814;HRun=0;HaplotypeScore=128.5971;InbreedingCoeff=0.9984;MQ=84.69;MQ0=0;MQRankSum=-18.130;QD=56.60;ReadPosRankSum=0.764;VQSLOD=6.5777;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,10:17:45.11:895,45,0	1/1:2,10:12:36.12:763,36,0	0/0:30,0:30:87.19:0,87,1386	0/0:11,0:11:24.08:0,24,364	1/1:3,20:23:60.21:1278,60,0	1/1:2,10:13:36.11:742,36,0	1/1:4,10:14:39.13:831,39,0	0/0:32,0:32:90.29:0,90,1461	1/1:3,15:18:48.16:1035,48,0	1/1:6,17:23:69.24:1487,69,0	1/1:5,16:21:60.21:1229,60,0	0/0:15,0:15:36.12:0,36,614	0/0:24,0:24:63.19:0,63,1022	0/0:15,0:15:36.11:0,36,588	1/1:4,16:20:48.16:1057,48,0	1/1:1,9:10:30.10:646,30,0	1/1:7,8:16:36.08:714,36,0	1/1:5,3:8:18.06:359,18,0	0/0:20,0:20:54.18:0,54,921	0/0:34,0:34:99:0,99,1634	0/0:11,0:11:30.10:0,30,512	1/1:4,11:15:42.10:849,42,0	0/0:32,0:32:90.31:0,90,1535	0/0:13,0:13:39.13:0,39,662	0/0:23,0:23:60.18:0,60,988	0/0:28,0:28:78.27:0,78,1330	0/0:19,0:19:57.20:0,57,971	0/0:22,0:22:66.23:0,66,1121
chr10	39614321	.	TA	T	4239.62	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=10.503;DP=572;FS=0.000;HRun=13;HaplotypeScore=57.8397;InbreedingCoeff=0.9515;MQ=70.73;MQ0=1;MQRankSum=-0.803;QD=14.72;ReadPosRankSum=4.053;VQSLOD=5.5123;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,36:39:77.60:638,78,0	1/1:3,7:10:20.86:153,21,0	0/0:13,0:11:3.83:0,4,64	0/0:9,0:7:5.85:0,6,44	0/0:25,1:28:51.54:0,52,568	1/1:8,21:29:59.60:438,60,0	1/1:3,11:14:29.83:219,30,0	0/0:30,1:32:58.97:0,59,689	1/1:4,13:18:40.80:290,41,0	1/1:10,12:24:13.81:245,14,0	1/1:6,27:34:26.56:494,27,0	1/1:5,11:16:20.77:147,21,0	1/1:3,15:18:38.75:284,39,0	1/1:3,12:15:29.80:219,30,0	0/0:17,0:17:42.06:0,42,403	0/0:15,1:17:12.76:0,13,291	0/0:24,1:25:41.14:0,41,543	1/1:3,25:28:62.63:459,63,0	0/0:8,0:8:14.98:0,15,133	0/0:21,2:23:36.95:0,37,488	0/0:5,0:5:15.02:0,15,146	0/0:19,0:19:28.33:0,28,340	1/1:8,20:29:25.80:348,26,0	1/1:0,14:14:41.76:306,42,0	0/0:20,0:20:42.06:0,42,404	0/0:30,0:31:50.87:0,51,573	0/0:23,0:23:35.94:0,36,331	0/0:14,0:14:32.98:0,33,299
chr10	39614799	.	G	GCCCTCCCCTT	17563.10	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-4.185;DP=595;FS=14.370;HRun=0;HaplotypeScore=196.0924;InbreedingCoeff=0.9900;MQ=66.98;MQ0=0;MQRankSum=-12.347;QD=71.98;ReadPosRankSum=-4.482;VQSLOD=2.7830;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:22,4:26:45.10:1086,45,0	1/1:8,3:11:30.01:1077,30,0	0/0:20,0:19:9.67:0,10,982	0/0:30,0:25:45.49:0,45,1090	1/1:12,8:21:39.85:1197,40,0	1/1:5,11:17:33.07:1482,33,0	1/1:21,4:24:50.79:889,51,0	0/0:19,0:19:28.33:0,28,744	1/1:15,9:23:51.16:2113,51,0	1/1:11,18:30:65.99:2330,66,0	1/1:7,6:13:29.73:1031,30,0	0/0:33,0:33:84.19:0,84,2405	0/0:20,0:20:42.14:0,42,1250	0/0:27,0:27:60.18:0,60,1729	1/1:13,6:19:51.17:1803,51,0	1/1:6,5:12:27.09:1170,27,0	1/1:6,6:12:30.07:1180,30,0	1/1:7,3:10:15.05:666,15,0	0/0:13,0:13:27.01:0,27,530	0/0:20,0:20:42.14:0,42,1245	0/0:40,0:40:81.25:0,81,2290	1/1:15,9:24:47.21:1540,47,0	0/0:17,0:17:30.10:0,30,923	0/0:26,0:26:36.06:0,36,912	0/0:23,0:23:42.14:0,42,1189	0/0:22,0:22:32.20:0,32,1381	0/0:25,0:25:60.19:0,60,1709	0/0:16,0:16:39.08:0,39,976
chr10	39614867	.	G	GGACCAGCAA	58259.13	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-5.332;DP=597;FS=5.579;HRun=0;HaplotypeScore=160.0358;InbreedingCoeff=0.9472;MQ=79.71;MQ0=0;MQRankSum=-11.084;QD=106.90;ReadPosRankSum=4.695;VQSLOD=4.9798;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,16:31:72.20:3160,72,0	1/1:6,7:14:39.01:1449,39,0	0/0:24,0:24:63.22:0,63,1777	0/0:28,0:28:71.85:0,72,1918	1/1:13,15:29:69.02:2191,69,0	1/1:7,5:12:29.97:949,30,0	1/1:7,16:24:66.22:2850,66,0	1/1:10,7:21:60.17:2440,60,0	1/1:8,16:23:63.17:2647,63,0	1/1:9,5:14:42.06:1736,42,0	1/1:4,10:15:30.10:1294,30,0	1/1:9,22:32:90.22:3937,90,0	1/1:10,19:31:81.28:3708,81,0	1/1:6,8:16:42.11:1820,42,0	1/1:7,16:25:60.16:2710,60,0	1/1:3,14:17:51.18:2454,51,0	1/1:3,6:10:27.01:1039,27,0	1/1:5,6:11:30.06:1297,30,0	1/1:12,3:17:48.14:1737,48,0	1/1:7,13:24:66.15:2352,66,0	1/1:6,10:22:39.05:1654,39,0	1/1:11,10:25:63.13:2147,63,0	1/1:6,9:16:45.07:1734,45,0	1/1:11,12:26:54.14:2467,54,0	1/1:7,15:27:63.17:2754,63,0	1/1:11,16:27:81.28:3863,81,0	1/1:10,18:31:78.22:3580,78,0	1/1:0,2:3:6.02:294,6,0
chr10	39615362	.	GTTT	G	5449.91	PASS	AB=0.967;AC=17;AF=0.304;AN=56;BaseQRankSum=-1.552;DP=692;FS=3.680;HRun=12;HaplotypeScore=128.1663;InbreedingCoeff=0.9235;MQ=70.32;MQ0=3;MQRankSum=-0.004;QD=24.22;ReadPosRankSum=3.566;VQSLOD=3.5634;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,28:34:75.20:947,75,0	1/1:2,14:17:34.47:452,34,0	0/0:33,0:23:32.81:0,33,411	0/1:28,1:20:9.54:10,0,263	0/0:15,0:28:53.83:0,54,522	1/1:2,19:21:51.15:644,51,0	1/1:1,21:22:57.18:720,57,0	0/0:21,0:22:42.12:0,42,719	1/1:4,15:19:42.12:531,42,0	1/1:5,30:35:41.25:1085,41,0	1/1:3,17:20:29.98:379,30,0	0/0:7,0:22:51.70:0,52,392	0/0:17,0:18:42.14:0,42,780	0/0:17,0:17:42.14:0,42,821	0/0:5,1:32:42.80:0,43,592	0/0:2,0:21:55.07:0,55,424	0/0:13,0:33:68.81:0,69,603	1/1:6,22:28:54.04:682,54,0	0/0:21,0:21:45.15:0,45,843	0/0:27,0:31:75.18:0,75,1254	0/0:15,0:20:45.15:0,45,846	0/0:6,0:21:50.81:0,51,424	0/0:5,0:23:61.07:0,61,505	0/0:4,0:30:77.73:0,78,636	0/0:14,0:14:33.11:0,33,624	0/0:33,0:35:90.24:0,90,1492	0/0:30,0:30:75.22:0,75,1353	0/0:13,0:15:42.14:0,42,774
chr10	39615752	.	ATGTGTGTGTGTGTGTG	A	2590.96	PASS	AB=0.833;AC=19;AF=0.365;AN=52;BaseQRankSum=3.800;DP=619;FS=5.200;HRun=0;HaplotypeScore=230.0692;InbreedingCoeff=0.4006;MQ=61.24;MQ0=26;MQRankSum=-3.121;QD=8.52;ReadPosRankSum=1.774;VQSLOD=2.2955;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:39:6.54:7,0,154	0/0:7,0:7:12.02:0,12,144	./.	./.	0/1:30,1:31:1.76:284,0,2	0/0:15,0:19:18.06:0,18,458	0/0:13,0:18:9.03:0,9,297	0/0:27,0:27:24.08:0,24,455	0/0:17,0:17:19.57:0,20,386	0/1:17,0:17:18.88:19,0,114	0/0:16,0:21:6.16:0,6,68	0/1:12,13:25:3.09:445,0,3	0/1:13,0:13:27.15:45,0,27	1/1:15,0:27:6.49:152,6,0	1/1:7,14:21:14.96:466,15,0	1/1:11,5:14:4.56:135,5,0	0/1:13,9:21:56.73:138,0,57	0/1:23,0:25:99:178,0,199	0/0:14,0:15:12.04:0,12,322	0/0:18,0:21:23.78:0,24,626	0/0:36,0:33:42.13:0,42,854	1/1:12,1:12:9.03:190,9,0	1/1:22,1:23:26.77:543,27,0	1/1:23,1:24:11.63:167,12,0	0/0:21,0:29:24.88:0,25,786	0/0:16,0:18:37.83:0,38,1002	0/0:14,0:14:32.46:0,32,654	0/0:7,0:6:9.03:0,9,265
chr10	39619696	.	T	TG	3531.74	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-7.341;DP=679;FS=0.847;HRun=6;HaplotypeScore=123.3363;InbreedingCoeff=0.9873;MQ=90.65;MQ0=0;MQRankSum=-1.971;QD=31.53;ReadPosRankSum=1.652;VQSLOD=2.1804;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,38:45:99:1358,108,0	1/1:1,10:11:30.10:376,30,0	0/0:33,0:33:63.77:0,64,623	0/0:30,0:30:54.24:0,54,667	0/0:32,0:32:84.18:0,84,855	0/0:22,0:22:66.11:0,66,662	0/0:28,0:28:75.14:0,75,757	0/0:29,0:29:72.13:0,72,720	0/0:21,0:21:60.14:0,60,612	1/1:2,20:22:57.17:703,57,0	1/1:2,14:16:39.06:491,39,0	0/0:27,0:27:72.13:0,72,721	0/0:24,0:24:72.16:0,72,734	0/0:23,0:23:63.13:0,63,637	0/0:36,0:36:96.20:0,96,972	0/0:31,0:31:90.21:0,90,918	0/0:37,0:37:99:0,105,1071	1/1:1,17:18:48.15:604,48,0	0/0:15,0:15:36.08:0,36,367	0/0:30,0:30:84.17:0,84,850	0/0:27,0:27:60.13:0,60,612	0/0:20,0:20:51.11:0,51,519	0/0:21,0:21:60.14:0,60,612	0/0:12,0:12:36.05:0,36,353	0/0:22,0:22:48.10:0,48,490	0/0:21,1:22:13.36:0,13,447	0/0:21,0:21:51.10:0,51,514	0/0:4,0:4:12.03:0,12,122
chr10	39619905	.	GT	G	7682.06	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=16.748;DP=700;FS=13.348;HRun=1;HaplotypeScore=77.9079;InbreedingCoeff=0.9984;MQ=79.19;MQ0=0;MQRankSum=-1.147;QD=34.92;ReadPosRankSum=3.968;VQSLOD=3.6905;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,57:57:99:2090,151,0	1/1:0,8:8:18.02:229,18,0	0/0:22,0:22:66.16:0,66,902	0/0:18,0:16:36.85:0,37,453	0/0:37,0:37:99:0,111,1680	1/1:0,27:27:72.24:993,72,0	1/1:0,30:30:57.19:795,57,0	0/0:32,0:32:96.29:0,96,1411	1/1:0,18:18:45.15:627,45,0	1/1:0,34:34:99:1369,102,0	1/1:0,26:26:66.22:910,66,0	0/0:16,0:16:45.13:0,45,690	0/0:26,0:26:78.20:0,78,1168	0/0:28,0:28:84.21:0,84,1223	0/0:26,0:26:78.21:0,78,1143	0/0:32,0:32:96.29:0,96,1479	0/0:22,0:22:66.15:0,66,968	1/1:1,19:20:48.16:669,48,0	0/0:28,0:28:79.78:0,80,1214	0/0:29,0:29:87.20:0,87,1266	0/0:23,0:23:69.20:0,69,1059	0/0:21,0:21:63.16:0,63,902	0/0:30,0:30:90.26:0,90,1363	0/0:17,0:17:51.16:0,51,788	0/0:24,0:24:72.23:0,72,1098	0/0:22,1:23:27.33:0,27,985	0/0:16,0:16:48.15:0,48,740	0/0:10,0:10:30.09:0,30,453
chr10	39620665	.	AAAAC	A	3869.74	PASS	AB=1.000;AC=33;AF=0.589;AN=56;BaseQRankSum=3.595;DP=620;FS=1.896;HRun=0;HaplotypeScore=153.8178;InbreedingCoeff=0.4642;MQ=70.97;MQ0=4;MQRankSum=-2.153;QD=9.00;ReadPosRankSum=1.911;VQSLOD=3.2469;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:24:34.90:298,35,0	1/1:12,0:12:20.99:316,21,0	0/0:32,0:23:27.87:0,28,378	0/0:20,0:18:0.31:0,0,220	1/1:29,1:30:63.03:445,63,0	0/0:23,0:23:47.11:0,47,332	0/0:25,0:25:62.30:0,62,474	0/1:24,0:23:11.57:50,0,12	0/0:24,0:23:50.30:0,50,329	1/1:25,0:25:49.94:421,50,0	1/1:11,0:11:24.03:262,24,0	0/1:19,0:19:16.57:17,0,331	0/0:17,0:17:17.25:0,17,90	0/0:19,0:19:34.59:0,35,246	1/1:23,2:25:38.29:324,38,0	1/1:21,0:21:35.72:273,36,0	1/1:39,0:39:54.28:376,54,0	1/1:21,0:21:53.34:458,53,0	0/1:26,0:26:0.96:105,0,1	0/1:18,0:17:18.62:19,0,30	1/1:11,0:11:6.26:16,6,0	1/1:15,1:16:34.02:265,34,0	0/0:29,0:29:14.65:0,15,772	0/1:18,0:18:7.73:8,0,407	0/1:32,0:32:15.86:49,0,16	0/1:24,0:24:31.44:81,0,31	1/1:24,0:24:19.24:73,19,0	1/1:10,0:10:6.20:16,6,0
chr10	39620676	.	AC	A	1504.17	PASS	AB=0.903;AC=11;AF=0.196;AN=56;BaseQRankSum=0.872;DP=612;FS=19.651;HRun=1;HaplotypeScore=137.8891;InbreedingCoeff=0.5547;MQ=64.39;MQ0=10;MQRankSum=-3.235;QD=10.45;ReadPosRankSum=-4.585;VQSLOD=-0.5340;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:22,2:24:2.59:245,0,3	1/1:4,6:10:6.66:161,7,0	0/0:27,0:18:28.30:0,28,546	0/0:17,0:14:29.12:0,29,251	0/0:28,0:28:70.40:0,70,417	0/0:20,0:18:51.16:0,51,747	0/0:24,0:24:69.13:0,69,984	0/0:27,2:26:23.24:0,23,301	0/0:23,0:20:57.19:0,57,861	1/1:19,4:23:53.86:488,54,0	1/1:14,2:16:11.50:246,11,0	0/0:16,0:16:4.11:0,4,314	0/0:19,0:19:3.12:0,3,37	0/1:17,2:19:88.59:89,0,142	0/0:26,1:27:15.97:0,16,209	0/0:20,0:20:31.38:0,31,176	0/0:35,2:37:43.08:0,43,323	1/1:16,6:22:49.70:420,50,0	0/0:27,0:27:15.99:0,16,390	0/0:17,1:17:3.35:0,3,162	0/0:15,0:14:21.33:0,21,206	0/0:13,1:14:0.29:0,0,155	0/0:27,0:27:63.23:0,63,804	0/0:18,0:18:35.66:0,36,408	0/0:31,0:30:69.56:0,70,464	0/0:19,1:20:45.59:0,46,369	0/1:26,4:30:16.14:16,0,218	0/0:11,0:11:26.49:0,26,164
chr10	39620678	.	AAAC	A	7695.54	PASS	AB=0.974;AC=38;AF=0.679;AN=56;BaseQRankSum=-5.155;DP=619;FS=1.671;HRun=0;HaplotypeScore=135.1065;InbreedingCoeff=0.6493;MQ=65.73;MQ0=10;MQRankSum=-2.008;QD=16.80;ReadPosRankSum=-0.164;VQSLOD=4.2988;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:22,2:24:10.33:244,10,0	1/1:5,5:10:9.73:237,10,0	0/0:27,0:18:34.78:0,35,364	0/0:18,0:15:11.73:0,12,227	1/1:5,24:29:78.82:947,79,0	0/0:20,0:18:39.36:0,39,177	0/0:24,0:24:54.96:0,55,305	1/1:32,0:29:52.24:356,52,0	0/0:25,0:22:45.97:0,46,179	1/1:22,1:23:41.23:498,41,0	0/1:15,2:17:4.65:199,0,5	0/1:15,0:15:17.65:18,0,209	0/0:20,0:20:2.16:0,2,3	0/1:20,0:20:3.61:4,0,60	1/1:4,21:25:38.87:613,39,0	1/1:1,19:20:37:587,37,0	1/1:6,30:36:59.87:905,60,0	1/1:21,2:23:49.41:494,49,0	1/1:25,1:26:56.16:363,56,0	1/1:16,1:16:29.78:207,30,0	1/1:14,0:13:17.63:151,18,0	1/1:5,9:14:41.95:585,42,0	0/0:27,0:27:4.83:0,5,483	0/1:19,0:19:13.41:13,0,226	1/1:28,2:29:54.11:377,54,0	1/1:22,0:22:33.29:371,33,0	1/1:29,2:31:58.07:386,58,0	1/1:11,0:11:25.94:140,26,0
chr10	39620679	.	AAC	A	10008.51	PASS	AB=1.000;AC=46;AF=0.821;AN=56;BaseQRankSum=-2.872;DP=615;FS=7.707;HRun=0;HaplotypeScore=116.1952;InbreedingCoeff=0.2561;MQ=65.54;MQ0=10;MQRankSum=-2.153;QD=17.50;ReadPosRankSum=2.909;VQSLOD=4.7317;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:24:15.77:258,16,0	1/1:10,1:11:14.27:219,14,0	0/0:26,0:17:25.14:0,25,283	0/0:17,0:14:26.50:0,26,210	1/1:25,4:29:79.68:753,80,0	0/1:19,0:17:20.35:63,0,20	0/1:24,0:24:66.15:66,0,105	1/1:7,24:28:67.32:838,67,0	0/1:25,0:22:11.40:80,0,11	1/1:21,2:23:44.08:462,44,0	1/1:18,0:18:6.13:242,6,0	0/1:15,0:15:31.10:31,0,79	1/1:20,0:20:19.11:94,19,0	1/1:19,0:19:32.27:175,32,0	1/1:24,1:25:38.81:362,39,0	1/1:20,0:20:36.90:340,37,0	1/1:33,3:36:60.11:626,60,0	1/1:19,4:23:48.86:424,49,0	1/1:7,18:25:65.51:768,66,0	1/1:4,13:16:41.62:459,42,0	1/1:6,8:13:26.30:442,26,0	1/1:14,0:14:41.21:373,41,0	0/1:27,0:27:47.59:48,0,184	0/1:19,0:19:69:69,0,71	1/1:6,24:29:65.70:873,66,0	1/1:14,8:22:61.90:674,62,0	1/1:7,24:31:60.13:866,60,0	1/1:0,11:11:27.09:402,27,0
chr10	39620680	.	AC	A	8673.86	PASS	AB=1.000;AC=47;AF=0.839;AN=56;BaseQRankSum=-3.717;DP=611;FS=1.517;HRun=1;HaplotypeScore=112.3935;InbreedingCoeff=0.8768;MQ=64.74;MQ0=10;MQRankSum=-1.575;QD=16.46;ReadPosRankSum=-1.545;VQSLOD=4.5629;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:25:49.02:354,49,0	1/1:10,0:10:24.41:196,24,0	0/1:25,0:16:9.08:9,0,209	0/0:15,0:13:20.44:0,20,157	1/1:29,0:29:79.51:584,80,0	0/0:19,0:17:44.76:0,45,224	0/0:24,0:24:59.43:0,59,338	1/1:27,3:27:68.70:536,69,0	0/0:26,0:23:50.39:0,50,249	1/1:25,1:26:68.50:557,68,0	1/1:19,0:19:41.84:308,42,0	1/1:15,0:15:15.75:127,16,0	1/1:0,20:20:21.04:289,21,0	1/1:16,3:19:47.03:464,47,0	1/1:24,0:24:38.63:287,39,0	1/1:20,0:20:36.60:270,37,0	1/1:34,2:36:59.78:466,60,0	1/1:23,0:23:60.52:454,61,0	1/1:21,3:24:68.31:565,68,0	1/1:14,3:16:41.89:366,42,0	1/1:12,2:13:36.43:331,36,0	1/1:13,1:14:39.81:287,40,0	1/1:26,1:27:34.42:192,34,0	1/1:17,1:18:25.33:193,25,0	1/1:26,3:28:65.93:595,66,0	1/1:21,1:22:64.41:535,64,0	1/1:26,4:30:59.56:492,60,0	1/1:11,0:11:26.93:217,27,0
chr10	39620681	.	CAA	C	3624.37	PASS	AB=0.945;AC=28;AF=0.500;AN=56;BaseQRankSum=1.050;DP=613;FS=9.078;HRun=11;HaplotypeScore=137.6688;InbreedingCoeff=0.3861;MQ=63.74;MQ0=10;MQRankSum=0.979;QD=8.97;ReadPosRankSum=10.082;VQSLOD=-0.5572;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:34.78:0,35,276	0/1:10,0:10:23.55:32,0,24	0/0:23,0:15:23.62:0,24,235	0/0:14,0:12:22.93:0,23,235	1/1:29,0:29:17.57:184,18,0	1/1:4,15:17:39.08:415,39,0	0/1:5,18:23:4.07:457,0,4	0/1:31,0:29:35.98:209,0,36	1/1:4,20:22:42.03:503,42,0	0/0:25,0:25:1.22:0,1,157	0/0:19,0:19:17.52:0,18,242	0/0:17,0:17:38.83:0,39,469	0/0:20,0:20:20.23:0,20,119	0/0:19,0:19:38.85:0,39,280	1/1:25,0:25:6.75:84,7,0	1/1:20,0:20:29.52:108,30,0	1/1:36,0:36:51.97:222,52,0	0/1:23,0:23:11.05:11,0,126	0/1:24,0:24:28.26:179,0,28	0/1:17,0:16:7.43:112,0,7	0/1:13,0:13:41.79:139,0,42	1/1:13,0:14:9.05:88,9,0	0/0:28,0:28:50.10:0,50,927	0/0:18,0:18:35.65:0,36,465	1/1:29,0:28:6.40:258,6,0	0/1:20,0:22:38.25:119,0,38	1/1:30,0:30:58.12:367,58,0	1/1:12,0:12:7.47:138,7,0
chr10	39621355	.	CCCT	C	4762.10	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=6.295;DP=775;FS=8.820;HRun=0;HaplotypeScore=123.3149;InbreedingCoeff=0.9926;MQ=87.62;MQ0=0;MQRankSum=-6.176;QD=38.10;ReadPosRankSum=2.376;VQSLOD=5.8321;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,30:35:72.25:1176,72,0	1/1:0,9:9:18.06:294,18,0	0/0:27,0:27:60.20:0,60,1255	0/0:33,0:32:51.57:0,52,1360	0/0:21,0:21:63.19:0,63,1315	0/0:21,0:21:63.22:0,63,1406	0/0:33,0:33:96.33:0,96,2115	0/0:27,0:27:78.27:0,78,1677	0/0:40,0:40:99:0,120,2561	1/1:3,38:41:99:1835,117,0	1/1:1,21:22:51.17:820,51,0	0/0:19,0:19:57.20:0,57,1255	0/0:26,0:26:78.27:0,78,1697	0/0:29,0:29:87.30:0,87,1926	0/0:30,0:30:90.31:0,90,1986	0/0:39,0:39:99:0,117,2569	0/0:24,0:24:72.25:0,72,1575	1/1:1,17:18:39.13:637,39,0	0/0:21,0:21:57.18:0,57,1230	0/0:33,0:33:99:0,99,2178	0/0:39,0:39:99:0,117,2614	0/0:26,0:26:75.25:0,75,1600	0/0:26,0:26:78.24:0,78,1653	0/0:33,0:33:90.28:0,90,1946	0/0:21,0:21:57.20:0,57,1272	0/0:36,2:38:13.41:0,13,2227	0/0:34,0:34:99:0,102,2245	0/0:10,0:10:27.09:0,27,593
chr10	39622553	.	C	CGTGT	1976.87	PASS	AB=0.965;AC=28;AF=0.500;AN=56;BaseQRankSum=10.193;DP=656;FS=13.136;HRun=0;HaplotypeScore=160.7584;InbreedingCoeff=0.1395;MQ=68.49;MQ0=16;MQRankSum=-2.905;QD=4.66;ReadPosRankSum=-4.906;VQSLOD=0.1468;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:55.88:0,56,995	0/1:10,0:10:3.01:3,0,252	0/0:30,0:20:47.97:0,48,556	0/0:25,0:19:44.64:0,45,638	0/1:12,0:12:9.08:9,0,31	0/0:21,0:21:14.42:0,14,482	0/0:30,0:28:59.29:0,59,629	1/1:19,0:18:20.52:162,21,0	0/1:20,0:20:3.92:4,0,311	0/0:30,0:30:56.42:0,56,1060	0/1:13,0:13:13.45:13,0,172	0/1:27,0:26:25.60:26,0,332	1/1:25,0:20:19.26:181,19,0	1/1:31,0:30:22.21:244,22,0	0/1:30,0:32:42.52:43,0,69	1/1:15,0:15:3.01:37,3,0	0/1:27,0:27:39.16:89,0,39	0/1:24,0:24:99:119,0,377	0/1:23,0:22:2.71:259,0,3	0/1:10,1:19:44.50:45,0,45	1/1:32,0:31:27.41:238,27,0	0/1:12,0:11:34.29:34,0,43	0/0:17,0:17:23.65:0,24,329	0/0:37,0:36:17.83:0,18,618	1/1:7,11:19:1.91:69,2,0	0/1:35,1:36:19.67:277,0,20	1/1:2,10:12:2.83:71,3,0	1/1:14,0:15:27.36:236,27,0
chr10	39622559	.	TGC	T	1937.83	PASS	AB=0.994;AC=22;AF=0.393;AN=56;BaseQRankSum=6.454;DP=640;FS=16.530;HRun=0;HaplotypeScore=136.2854;InbreedingCoeff=0.4773;MQ=58.22;MQ0=18;MQRankSum=-0.271;QD=6.48;ReadPosRankSum=-4.700;VQSLOD=0.8337;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:44,2:46:26.92:0,27,620	0/0:10,0:10:23.34:0,23,219	0/0:24,0:12:29.68:0,30,271	0/0:20,0:14:32.53:0,33,347	0/1:10,0:10:5.22:5,0,47	0/0:20,0:19:14.61:0,15,382	0/0:30,0:28:42.34:0,42,329	1/1:23,0:20:38.04:301,38,0	0/0:23,0:23:28.14:0,28,208	0/0:30,0:30:84.50:0,85,791	0/0:16,0:16:27.12:0,27,263	0/0:30,0:29:37.68:0,38,309	1/1:26,0:21:41.26:331,41,0	1/1:27,0:26:26.36:204,26,0	0/0:25,0:25:42.47:0,42,323	0/0:15,0:15:3.01:0,3,42	0/1:26,0:26:5.43:5,0,49	0/1:28,1:29:40.03:40,0,546	1/1:19,0:18:2.85:224,3,0	0/1:18,0:17:2.54:142,0,3	1/1:29,0:28:14.09:215,14,0	0/1:11,0:10:34.12:34,0,53	0/0:19,0:19:20.29:0,20,146	0/0:32,1:32:2.59:0,3,304	1/1:19,0:19:6.13:94,6,0	0/1:34,0:34:99:282,0,142	1/1:13,0:13:1.25:39,1,0	1/1:15,0:15:25.92:209,26,0
chr10	39622561	.	C	CGTGTGTGT	5122.42	PASS	AB=0.723;AC=46;AF=0.885;AN=52;BaseQRankSum=-2.554;DP=674;FS=17.405;HRun=0;HaplotypeScore=191.7387;InbreedingCoeff=-0.0845;MQ=54.16;MQ0=18;MQRankSum=0.024;QD=8.08;ReadPosRankSum=0.024;VQSLOD=2.8639;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:45,0:45:38.41:380,38,0	0/1:7,0:10:18.47:18,0,63	./.	./.	1/1:10,0:10:3.01:48,3,0	0/1:20,0:19:19.55:200,0,20	1/1:30,0:28:17.25:293,17,0	1/1:25,0:22:31.29:360,31,0	1/1:9,1:25:6.02:182,6,0	1/1:24,0:33:10.88:99,11,0	0/1:4,0:20:6.78:46,0,7	1/1:10,17:33:11.97:381,12,0	1/1:25,0:20:6.02:96,6,0	1/1:27,0:26:17.95:313,18,0	1/1:26,0:26:9.03:181,9,0	1/1:3,0:18:3.01:85,3,0	1/1:7,0:36:10.55:240,11,0	0/1:19,0:28:30.42:336,0,30	1/1:18,0:17:5.45:187,5,0	1/1:18,0:17:0.60:104,1,0	1/1:31,0:30:12.38:288,12,0	1/1:11,0:10:8.72:124,9,0	0/1:8,12:21:0:0,0,0	0/1:19,18:42:0.08:107,0,0	1/1:19,0:19:3.01:49,3,0	1/1:34,0:34:34.30:528,34,0	1/1:12,0:12:6:63,6,0	1/1:15,0:15:27.04:415,27,0
chr10	39622710	.	C	CCAT	7912.15	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=-9.257;DP=695;FS=1.623;HRun=0;HaplotypeScore=96.2787;InbreedingCoeff=0.9078;MQ=57.45;MQ0=10;MQRankSum=1.623;QD=31.90;ReadPosRankSum=4.115;VQSLOD=5.3980;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,37:43:66.22:1293,66,0	1/1:1,9:10:24.08:505,24,0	0/0:45,0:27:42.94:0,43,521	0/0:40,0:22:11.79:0,12,365	1/1:5,16:21:27.09:483,27,0	0/0:21,0:20:60.17:0,60,855	0/0:24,0:24:60.18:0,60,865	0/0:26,0:26:63.12:0,63,805	0/0:30,0:30:81.21:0,81,1107	1/1:5,29:36:90.22:1609,90,0	1/1:1,14:16:21.07:386,21,0	0/0:20,0:20:60.18:0,60,864	0/0:26,0:26:63.11:0,63,843	0/0:30,0:29:81.19:0,81,1117	1/1:2,10:12:27.09:560,27,0	1/1:2,12:14:21.07:417,21,0	1/1:3,10:13:21.03:368,21,0	1/1:5,37:42:90.31:1891,90,0	0/0:21,0:17:35.45:0,35,448	0/0:14,0:14:33.11:0,33,494	0/0:41,0:40:99:0,111,1520	1/1:3,9:12:21.07:360,21,0	0/0:26,0:26:72.11:0,72,946	0/0:27,0:26:60.19:0,60,879	0/0:26,0:25:72.20:0,72,1020	0/1:29,0:28:40.48:40,0,857	0/0:23,0:23:63.18:0,63,885	0/0:6,0:6:9.03:0,9,135
chr10	39622751	.	TAAG	T	580.63	PASS	AB=0.786;AC=4;AF=0.071;AN=56;BaseQRankSum=6.562;DP=637;FS=0.788;HRun=0;HaplotypeScore=102.6968;InbreedingCoeff=-0.0773;MQ=58.88;MQ0=1;MQRankSum=-5.708;QD=7.35;ReadPosRankSum=-1.897;VQSLOD=2.7404;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:69.24:0,69,1494	0/0:6,0:6:18.06:0,18,431	0/0:23,0:21:60.20:0,60,1331	0/0:16,0:10:30.10:0,30,633	0/1:27,8:35:99:286,0,1237	0/0:20,0:19:57.19:0,57,1298	0/0:26,0:26:78.22:0,78,1792	0/0:31,0:31:93.32:0,93,2149	0/0:25,0:25:72.21:0,72,1573	0/0:34,0:34:99:0,102,2391	0/0:15,0:15:42.14:0,42,946	0/0:23,0:23:69.24:0,69,1589	0/0:25,0:25:72.25:0,72,1623	0/0:27,0:26:78.27:0,78,1815	0/1:13,2:15:34.43:34,0,814	0/0:12,0:12:33.11:0,33,774	0/1:11,3:14:43.47:43,0,651	0/0:35,0:35:96.33:0,96,2226	0/0:15,0:14:42.14:0,42,970	0/0:18,0:18:51.16:0,51,1154	0/0:30,0:30:90.31:0,90,2129	0/1:6,9:15:99:326,0,379	0/0:23,0:23:66.21:0,66,1489	0/0:26,0:26:78.27:0,78,1773	0/0:26,0:25:78.26:0,78,1781	0/0:34,0:34:99:0,102,2310	0/0:23,0:23:69.20:0,69,1518	0/0:9,0:9:27.04:0,27,540
chr10	39624017	.	A	AATG	15325.30	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-16.659;DP=662;FS=2.968;HRun=0;HaplotypeScore=81.9260;InbreedingCoeff=0.9994;MQ=79.41;MQ0=0;MQRankSum=-5.816;QD=60.81;ReadPosRankSum=1.283;VQSLOD=6.4362;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:72.25:0,72,1227	0/0:8,0:8:24.05:0,24,380	0/0:20,0:20:54.15:0,54,862	0/0:14,0:14:39.09:0,39,580	0/0:38,0:38:99:0,111,1881	0/0:25,0:25:72.25:0,72,1228	0/0:18,0:18:54.17:0,54,894	1/1:5,30:36:99:2261,102,0	0/0:17,0:17:51.16:0,51,843	0/0:32,0:32:93.30:0,93,1518	0/0:25,0:25:66.21:0,66,1099	0/0:27,0:27:72.25:0,72,1227	1/1:2,14:16:45.15:1000,45,0	1/1:0,18:18:51.18:1173,51,0	0/0:24,0:24:63.22:0,63,1074	0/0:28,0:28:81.27:0,81,1358	0/0:28,0:28:84.25:0,84,1357	0/0:18,0:18:51.17:0,51,858	1/1:3,13:16:45.11:899,45,0	1/1:2,28:30:84.29:1911,84,0	1/1:2,15:18:42.14:968,42,0	0/0:29,0:29:84.29:0,84,1433	0/0:25,0:25:72.22:0,72,1177	0/0:10,0:10:27.09:0,27,460	1/1:1,32:33:96.33:2199,96,0	1/1:2,24:26:75.26:1690,75,0	1/1:3,40:45:99:2602,114,0	1/1:3,10:14:27.09:622,27,0
chr10	39628509	.	A	AT	4657.50	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-14.196;DP=657;FS=0.000;HRun=5;HaplotypeScore=58.5271;InbreedingCoeff=0.9977;MQ=77.63;MQ0=0;MQRankSum=-2.908;QD=34.00;ReadPosRankSum=1.752;VQSLOD=5.1206;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:48.12:0,48,516	0/0:8,0:8:24.06:0,24,258	0/0:18,0:18:42.08:0,42,436	0/0:10,0:10:27.02:0,27,268	0/0:41,0:41:99:0,117,1248	1/1:1,19:20:54.18:711,54,0	1/1:0,23:23:63.20:829,63,0	0/0:39,0:39:93.23:0,93,999	1/1:0,29:29:78.25:1026,78,0	0/0:32,0:32:90.23:0,90,967	0/0:28,0:28:84.19:0,84,894	1/1:3,22:25:57.19:750,57,0	0/0:22,0:22:37.42:0,37,560	0/0:20,0:20:60.15:0,60,644	0/0:23,0:23:66.15:0,66,700	0/0:19,0:19:54.14:0,54,580	0/0:27,0:27:78.18:0,78,830	0/0:15,0:15:42.10:0,42,451	0/0:22,0:22:51.10:0,51,548	0/0:35,0:35:99:0,99,1064	0/0:22,0:22:60.11:0,60,626	0/0:26,0:26:78.19:0,78,831	1/1:0,23:23:63.20:829,63,0	1/1:1,16:17:39.13:513,39,0	0/0:32,0:32:90.21:0,90,958	0/0:28,0:28:72.17:0,72,767	0/0:31,0:31:90.22:0,90,967	0/0:6,0:6:18.05:0,18,193
chr10	39628735	.	T	TA	10301.35	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-16.908;DP=796;FS=0.278;HRun=4;HaplotypeScore=68.4659;InbreedingCoeff=0.9998;MQ=74.19;MQ0=0;MQRankSum=-1.486;QD=36.66;ReadPosRankSum=1.097;VQSLOD=5.1065;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,132,1496	0/0:10,0:10:30.09:0,30,340	0/0:30,0:30:81.23:0,81,917	0/0:31,0:31:87.20:0,87,959	0/0:28,0:28:84.24:0,84,953	0/0:33,0:33:99:0,99,1112	0/0:26,0:26:78.22:0,78,884	1/1:3,38:41:99:1541,114,0	0/0:30,0:30:81.23:0,81,919	0/0:36,0:36:99:0,102,1156	0/0:32,0:32:93.27:0,93,1054	0/0:20,0:20:57.14:0,57,634	1/1:2,28:30:66.22:903,66,0	1/1:1,27:28:75.25:1026,75,0	0/0:40,0:40:99:0,120,1332	0/0:25,0:25:75.21:0,75,851	0/0:20,0:20:51.14:0,51,578	0/0:18,0:18:51.14:0,51,578	1/1:0,21:21:60.20:821,60,0	1/1:1,39:40:99:1579,117,0	1/1:1,20:21:54.18:739,54,0	0/0:29,0:29:87.19:0,87,954	0/0:30,0:30:84.24:0,84,952	0/0:29,0:29:78.22:0,78,884	1/1:2,22:24:60.20:821,60,0	1/1:0,27:27:81.27:1108,81,0	1/1:2,36:37:99:1354,99,0	1/1:0,11:11:30.10:410,30,0
chr10	39634614	.	TAC	T	459.20	PASS	AB=0.721;AC=9;AF=0.167;AN=54;BaseQRankSum=-3.918;DP=687;FS=29.723;HRun=0;HaplotypeScore=143.3667;InbreedingCoeff=0.4829;MQ=62.22;MQ0=13;MQRankSum=4.852;QD=5.53;ReadPosRankSum=3.701;VQSLOD=1.3182;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,5:24:9.50:165,10,0	1/1:4,2:6:6.01:67,6,0	./.	0/0:32,0:25:3.01:0,3,39	0/0:21,0:21:5.73:0,6,51	0/0:7,0:20:8.28:0,8,78	0/0:30,0:32:43.77:0,44,392	0/0:25,0:20:5.87:0,6,36	0/0:28,0:30:25.98:0,26,238	0/1:19,12:31:62.84:185,0,63	1/1:5,2:6:8.63:81,9,0	0/0:35,0:34:4.47:0,4,29	0/0:22,0:23:25.60:0,26,176	0/0:7,0:24:1.55:0,2,24	0/0:36,0:36:16.42:0,16,116	0/0:36,0:36:11.83:0,12,147	0/0:16,0:16:14.97:0,15,139	1/1:9,6:15:9.02:100,9,0	0/0:14,0:10:0.50:0,1,50	0/0:18,0:18:3.01:0,3,36	0/0:39,0:36:14.16:0,14,162	0/0:22,0:22:2.25:0,2,39	0/0:22,0:21:13.36:0,13,125	0/0:23,0:19:12.40:0,12,95	0/0:34,0:34:5.79:0,6,37	0/0:26,0:26:28.29:0,28,304	0/0:17,0:17:28.57:0,29,233	0/0:23,0:20:30.17:0,30,211
chr10	39634714	.	ACTCT	A	11613.94	PASS	AB=0.750;AC=41;AF=0.732;AN=56;BaseQRankSum=-8.959;DP=806;FS=1.698;HRun=0;HaplotypeScore=199.3583;InbreedingCoeff=0.6165;MQ=58.06;MQ0=10;MQRankSum=0.203;QD=20.74;ReadPosRankSum=-0.331;VQSLOD=4.5413;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:37,1:37:74.73:816,75,0	1/1:15,0:15:30.71:329,31,0	0/0:42,0:16:20.32:0,20,274	0/0:57,0:23:20.06:0,20,304	0/1:10,1:18:25.19:25,0,109	1/1:12,8:20:21.16:623,21,0	1/1:9,24:33:13.34:214,13,0	1/1:8,21:26:57.10:808,57,0	1/1:16,10:26:54.14:817,54,0	1/1:24,0:23:30.79:576,31,0	1/1:18,0:18:0.51:237,1,0	1/1:40,6:46:11.40:866,11,0	0/0:15,0:25:10.06:0,10,216	0/1:17,0:23:14.84:15,0,107	0/0:38,0:54:98.12:0,98,470	0/0:29,0:43:1.02:0,1,362	0/0:14,0:22:32.10:0,32,143	1/1:14,0:14:35:304,35,0	1/1:3,11:14:39.10:553,39,0	1/1:15,3:18:39.12:603,39,0	1/1:45,12:55:72.15:1304,72,0	0/1:20,0:28:58.06:58,0,148	1/1:13,1:13:7.83:122,8,0	1/1:26,2:28:35.72:436,36,0	1/1:13,9:23:51.71:722,52,0	1/1:16,3:20:45.11:650,45,0	1/1:16,9:25:57.19:925,57,0	1/1:19,6:25:39.60:611,40,0
chr10	39634732	.	TCTCA	T	6546.09	PASS	AB=0.993;AC=39;AF=0.696;AN=56;BaseQRankSum=-0.179;DP=838;FS=13.783;HRun=0;HaplotypeScore=236.9908;InbreedingCoeff=-0.1556;MQ=57.67;MQ0=13;MQRankSum=3.112;QD=8.28;ReadPosRankSum=-0.319;VQSLOD=2.7007;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:45,0:44:97.35:628,97,0	1/1:18,0:18:35.47:222,35,0	0/0:28,0:10:1.73:0,2,105	0/1:43,0:19:25.34:25,0,98	0/1:25,0:24:99:104,0,160	1/1:18,0:18:42.76:355,43,0	0/1:31,0:31:66.96:109,0,67	0/1:37,0:36:99:323,0,234	1/1:29,1:30:36.35:460,36,0	1/1:29,1:30:17.19:308,17,0	1/1:22,0:21:30.19:184,30,0	0/1:48,0:48:39.89:351,0,40	0/1:31,0:29:33.16:33,0,295	0/1:26,0:26:48.08:48,0,142	0/1:54,0:54:25.58:26,0,430	0/1:51,0:50:26.63:27,0,549	0/0:19,0:18:37.84:0,38,208	1/1:17,0:16:28.18:140,28,0	1/1:17,0:15:12.63:265,13,0	1/1:21,0:19:26.01:318,26,0	0/1:60,1:60:11.85:538,0,12	0/1:30,1:31:99:156,0,120	0/1:14,0:14:15.01:41,0,15	1/1:30,0:29:21.01:169,21,0	1/1:29,0:29:5.88:493,6,0	0/1:20,0:20:18.07:344,0,18	1/1:25,0:25:17.86:467,18,0	1/1:15,0:15:44.72:411,45,0
chr10	39634734	.	TCA	T	6617.50	PASS	AB=0.997;AC=40;AF=0.714;AN=56;BaseQRankSum=-0.298;DP=827;FS=15.612;HRun=0;HaplotypeScore=211.5221;InbreedingCoeff=-0.3695;MQ=56.59;MQ0=13;MQRankSum=4.540;QD=8.00;ReadPosRankSum=3.626;VQSLOD=3.4581;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:36,10:46:99:1244,112,0	1/1:15,3:18:38.51:417,39,0	0/1:25,0:10:10.14:10,0,70	0/1:40,0:17:38.03:38,0,48	0/1:26,0:25:10.11:177,0,10	0/1:17,0:17:24.76:25,0,36	0/1:33,0:33:25.81:26,0,93	0/1:38,0:37:99:135,0,282	0/1:30,0:30:35.74:91,0,36	1/1:22,9:30:45:700,45,0	1/1:18,3:20:43.07:463,43,0	0/1:47,0:47:3.24:235,0,3	1/1:30,0:28:11.85:249,12,0	1/1:25,1:26:28.15:204,28,0	1/1:53,0:53:39.67:430,40,0	0/1:49,0:48:7.87:339,0,8	1/1:18,0:17:9.15:116,9,0	1/1:10,7:16:22.02:414,22,0	0/1:17,0:15:16.91:63,0,17	0/1:21,0:19:9.43:70,0,9	0/1:60,0:59:31.40:31,0,207	1/1:29,0:29:56.51:343,57,0	0/1:13,0:13:5.74:25,0,6	1/1:31,0:30:24.17:178,24,0	0/1:29,0:29:32.08:174,0,32	0/1:19,1:20:84.09:158,0,84	0/1:25,0:25:64.79:88,0,65	1/1:15,0:15:5.38:176,5,0
chr10	39634748	.	T	TCACA	1305.86	PASS	AB=0.932;AC=6;AF=0.107;AN=56;BaseQRankSum=4.545;DP=792;FS=1.402;HRun=0;HaplotypeScore=250.2143;InbreedingCoeff=0.6557;MQ=52.40;MQ0=10;MQRankSum=0.309;QD=11.26;ReadPosRankSum=0.792;VQSLOD=3.1956;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:42:90.25:0,90,916	0/0:14,0:14:24.92:0,25,226	0/0:9,0:4:5.76:0,6,33	0/1:25,0:5:0.75:1,0,73	0/0:25,0:24:43.78:0,44,626	0/0:20,0:20:47.99:0,48,815	0/0:29,0:29:35.84:0,36,543	0/0:40,0:39:99:0,106,1623	0/0:32,0:32:59.87:0,60,929	0/0:32,0:30:51.22:0,51,716	0/0:19,0:18:32.80:0,33,339	0/1:41,5:46:38.45:762,0,38	0/0:31,0:29:69.08:0,69,1160	0/0:25,0:25:38.99:0,39,544	0/0:50,0:49:99:0,110,1651	0/0:47,0:46:99:0,108,1748	0/0:23,0:21:46.48:0,46,645	0/0:20,0:19:40.45:0,40,494	0/0:16,0:14:29.92:0,30,461	0/0:20,0:19:41.70:0,42,610	0/0:62,0:61:99:0,114,1903	0/0:30,0:30:59.75:0,60,766	1/1:13,2:15:18.08:234,18,0	1/1:25,4:28:29.72:437,30,0	0/0:29,0:29:49.04:0,49,679	0/0:23,0:23:64.99:0,65,963	0/0:23,0:22:54.05:0,54,852	0/0:14,0:14:38.77:0,39,582
chr10	39634803	.	A	ACT	17023.29	PASS	AB=1.000;AC=53;AF=0.946;AN=56;BaseQRankSum=-2.812;DP=839;FS=10.033;HRun=0;HaplotypeScore=172.2471;InbreedingCoeff=0.7700;MQ=62.55;MQ0=11;MQRankSum=-1.224;QD=21.12;ReadPosRankSum=1.817;VQSLOD=4.5176;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:17,22:39:56.29:1259,56,0	1/1:2,6:8:12.04:196,12,0	0/1:44,0:21:2.02:2,0,79	0/0:33,0:22:15.10:0,15,200	1/1:4,20:27:36.12:574,36,0	1/1:1,0:20:42.02:371,42,0	1/1:8,3:37:72.05:684,72,0	1/1:13,2:37:87.04:830,87,0	1/1:8,1:37:72.04:667,72,0	1/1:8,27:35:29.63:1169,30,0	1/1:2,12:14:21.06:342,21,0	1/1:11,21:32:63.11:947,63,0	1/1:17,0:31:59.96:536,60,0	1/1:5,1:31:51.01:451,51,0	1/1:5,40:45:87.18:1392,87,0	1/1:10,33:43:57.13:1064,57,0	1/1:2,24:25:23.27:890,23,0	1/1:7,11:18:27.09:422,27,0	1/1:4,0:11:24:211,24,0	1/1:3,1:15:17.65:174,18,0	1/1:13,3:70:81.23:854,81,0	1/1:3,29:30:22.73:857,23,0	1/1:3,19:22:33.11:534,33,0	1/1:16,15:31:47.90:758,48,0	1/1:4,3:24:38.80:383,39,0	1/1:5,1:33:84.02:792,84,0	1/1:4,3:23:35.90:352,36,0	1/1:2,0:14:35.99:313,36,0
chr10	39634949	.	ACT	A	1752.08	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=5.874;DP=886;FS=4.582;HRun=0;HaplotypeScore=223.6433;InbreedingCoeff=0.8254;MQ=62.52;MQ0=6;MQRankSum=-3.406;QD=14.36;ReadPosRankSum=-0.177;VQSLOD=2.7303;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:93.28:0,93,1504	0/0:8,0:8:12.02:0,12,174	0/0:62,0:34:16.01:0,16,621	0/1:56,0:27:3.03:3,0,168	0/0:20,0:20:38.82:0,39,598	0/0:22,0:22:34.35:0,34,702	0/0:36,0:36:88.15:0,88,1372	0/0:33,0:33:75.18:0,75,1163	0/0:47,0:47:99:0,126,1956	0/0:33,1:34:50.41:0,50,1155	0/0:20,0:20:30.09:0,30,468	0/0:32,0:32:81.41:0,81,1206	1/1:11,19:30:74.99:879,75,0	1/1:11,25:36:86.85:994,87,0	0/0:47,0:47:99:0,114,1844	0/0:54,0:54:99:0,144,2237	0/0:22,0:22:60.16:0,60,939	0/0:13,0:13:36.10:0,36,578	0/0:17,0:16:36.07:0,36,550	0/0:20,0:20:33.02:0,33,474	0/0:65,0:65:99:0,144,2230	0/0:31,0:31:81.12:0,81,1178	0/0:19,0:19:26.56:0,27,423	0/0:29,0:29:62.77:0,63,1026	0/0:29,0:29:29.88:0,30,421	0/0:24,0:24:62.89:0,63,957	0/0:34,0:32:88.89:0,89,1344	0/0:11,0:11:24.01:0,24,359
chr10	39634964	.	CCT	C	1859.76	PASS	AB=0.991;AC=22;AF=0.393;AN=56;BaseQRankSum=10.243;DP=856;FS=27.654;HRun=0;HaplotypeScore=225.7604;InbreedingCoeff=-0.0596;MQ=57.10;MQ0=12;MQRankSum=0.282;QD=3.74;ReadPosRankSum=0.989;VQSLOD=1.5223;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,119,1701	0/1:6,0:6:3.36:3,0,111	0/0:63,1:24:56.20:0,56,743	0/0:45,0:15:26.09:0,26,331	0/0:19,0:19:18.41:0,18,208	0/1:19,0:19:72.72:132,0,73	0/1:34,0:34:83.69:84,0,156	0/1:29,0:29:25.92:26,0,219	0/1:46,0:46:99:152,0,216	0/0:29,0:29:85.45:0,85,1281	0/0:19,0:19:44.94:0,45,492	0/1:29,0:29:42.38:42,0,228	1/1:29,1:30:12.32:310,12,0	0/1:41,0:41:62.27:186,0,62	0/0:52,0:52:85.46:0,85,1134	0/0:52,1:53:99:0,114,1228	0/0:24,0:24:15.26:0,15,515	0/0:11,1:12:30.10:0,30,450	0/1:16,1:14:14.53:87,0,15	0/1:18,0:18:28.06:28,0,103	1/1:54,2:56:0.04:334,0,0	0/1:30,0:30:2.54:3,0,273	0/1:16,0:16:16.45:43,0,16	0/1:31,0:31:43.17:43,0,115	1/1:31,0:31:32.49:154,32,0	0/1:27,0:27:90.83:134,0,91	0/1:27,2:27:99:163,0,179	1/1:8,0:8:22.25:108,22,0
chr10	39634965	.	CTT	C	8950.18	PASS	AB=0.982;AC=37;AF=0.661;AN=56;BaseQRankSum=-0.469;DP=858;FS=8.045;HRun=2;HaplotypeScore=203.3094;InbreedingCoeff=0.4306;MQ=57.05;MQ0=12;MQRankSum=3.257;QD=13.88;ReadPosRankSum=-1.792;VQSLOD=0.8574;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:80.39:0,80,941	0/1:6,0:6:23.29:23,0,47	0/0:64,0:24:58.64:0,59,607	0/0:48,0:15:31.34:0,31,280	0/1:18,1:19:23.70:24,0,113	1/1:10,11:21:50.52:529,51,0	1/1:18,16:34:63.72:701,64,0	1/1:7,21:28:45.13:485,45,0	1/1:26,19:45:81.21:892,81,0	0/0:29,0:29:79.39:0,79,671	0/0:20,0:20:30.21:0,30,199	0/1:30,0:30:32.15:174,0,32	1/1:14,16:30:36.86:682,37,0	1/1:18,23:41:72.10:751,72,0	0/1:49,3:52:99:122,0,558	0/1:51,1:52:99:158,0,673	0/1:24,0:24:75.41:75,0,280	0/0:12,0:12:29.36:0,29,242	1/1:11,6:14:31.36:329,31,0	1/1:3,15:18:11.78:143,12,0	1/1:29,29:58:99:1631,150,0	0/1:30,0:30:31.33:31,0,151	1/1:16,0:16:12.11:81,12,0	1/1:31,0:31:11.46:141,11,0	1/1:0,30:30:39.08:445,39,0	1/1:13,13:26:52.55:666,53,0	1/1:18,11:28:53.96:567,54,0	1/1:0,8:8:24.07:297,24,0
chr10	39634966	.	T	TCTC	1597.20	PASS	AB=0.879;AC=6;AF=0.107;AN=56;BaseQRankSum=1.549;DP=866;FS=2.378;HRun=0;HaplotypeScore=246.7040;InbreedingCoeff=0.3284;MQ=55.60;MQ0=12;MQRankSum=-0.046;QD=13.89;ReadPosRankSum=-1.154;VQSLOD=2.8213;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,117,1961	0/1:7,0:7:23.09:23,0,103	0/0:62,0:23:53.86:0,54,723	0/0:47,0:14:22.20:0,22,281	0/0:19,0:19:20.89:0,21,206	0/0:22,0:22:19.94:0,20,361	0/0:33,0:33:85.48:0,85,752	0/0:28,0:28:71.15:0,71,588	0/0:44,0:44:99:0,113,1033	0/0:31,0:31:85.20:0,85,1352	0/0:21,0:21:44.89:0,45,546	0/1:17,11:29:4.14:840,0,4	0/0:32,0:32:53.01:0,53,559	0/0:43,0:43:73.40:0,73,695	0/0:54,0:53:99:0,126,1167	0/0:51,0:51:99:0,137,1305	0/0:26,0:26:31.82:0,32,582	0/0:11,0:11:30.09:0,30,470	0/0:17,0:14:29.20:0,29,287	0/0:18,0:18:21.05:0,21,218	0/0:60,0:60:99:0,128,1049	0/1:31,0:31:12.17:12,0,267	0/1:13,3:17:37.32:69,0,37	1/1:17,11:31:17.17:782,17,0	0/0:30,0:30:20.02:0,20,287	0/0:25,0:25:55.66:0,56,584	0/0:29,0:27:56.58:0,57,616	0/0:8,0:8:24.03:0,24,235
chr10	39634981	.	TCA	T	9556.49	PASS	AB=0.625;AC=35;AF=0.625;AN=56;BaseQRankSum=-2.591;DP=868;FS=4.416;HRun=0;HaplotypeScore=199.8669;InbreedingCoeff=0.8395;MQ=49.94;MQ0=18;MQRankSum=0.643;QD=18.78;ReadPosRankSum=-3.126;VQSLOD=4.3092;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:18,18:36:65.96:737,66,0	1/1:1,6:7:6.01:65,6,0	0/0:66,0:12:3.90:0,4,36	0/0:44,0:8:2.53:0,3,13	0/0:15,0:15:15.05:0,15,239	1/1:23,0:23:19.16:445,19,0	1/1:34,0:34:63.06:682,63,0	1/1:41,0:41:73.34:680,73,0	1/1:42,1:43:41.76:677,42,0	1/1:4,26:30:71.90:707,72,0	1/1:6,14:20:24.07:287,24,0	0/0:24,0:24:49.72:0,50,542	1/1:35,0:36:79.98:753,80,0	1/1:46,1:47:73.98:794,74,0	0/0:58,0:57:57.39:0,57,1279	0/0:49,0:49:72.54:0,73,1552	0/0:28,0:28:20.58:0,21,702	0/1:4,5:10:6.15:128,0,6	1/1:14,0:11:21.04:237,21,0	1/1:15,0:15:17.96:183,18,0	1/1:57,0:59:99:1335,126,0	0/0:32,0:32:33.06:0,33,472	0/0:14,0:14:2.91:0,3,21	0/0:27,0:29:51.14:0,51,558	1/1:29,0:29:42.06:461,42,0	1/1:22,2:24:60.10:655,60,0	1/1:29,0:27:40.36:453,40,0	1/1:11,0:11:24.07:278,24,0
chr10	39635059	.	T	TTC	17331.63	PASS	AB=0.563;AC=41;AF=0.732;AN=56;BaseQRankSum=-13.691;DP=901;FS=12.746;HRun=0;HaplotypeScore=205.5709;InbreedingCoeff=0.9394;MQ=54.94;MQ0=2;MQRankSum=1.900;QD=25.60;ReadPosRankSum=-3.746;VQSLOD=3.8794;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:34,3:37:80.56:942,81,0	1/1:18,1:19:47.97:564,48,0	0/0:20,0:8:15.05:0,15,181	0/0:23,0:11:20.11:0,20,189	1/1:4,15:19:30.10:463,30,0	1/1:5,21:26:39.13:596,39,0	1/1:19,20:39:86.56:1242,87,0	1/1:14,22:36:35.76:827,36,0	1/1:4,30:34:53.42:889,53,0	1/1:35,5:40:84.04:1058,84,0	1/1:20,0:20:24.14:466,24,0	0/0:5,0:37:77.93:0,78,381	0/0:15,0:45:77.09:0,77,376	0/0:8,0:40:42.18:0,42,251	1/1:10,45:55:67.47:1052,67,0	1/1:6,38:43:76.72:1142,77,0	0/1:8,28:36:1.69:772,0,2	1/1:11,1:12:30.05:360,30,0	1/1:11,6:17:20.93:269,21,0	1/1:5,13:18:30.10:462,30,0	1/1:58,35:93:99:2634,161,0	1/1:8,24:32:39.13:586,39,0	0/0:6,0:24:34.09:0,34,168	0/0:10,0:35:62.53:0,63,314	1/1:17,13:30:44.18:679,44,0	1/1:4,20:24:53.86:813,54,0	1/1:12,16:29:75.10:1074,75,0	1/1:1,15:16:27.09:440,27,0
chr10	39635072	.	TCTTA	T	1117.31	PASS	AB=0.947;AC=6;AF=0.107;AN=56;BaseQRankSum=-3.101;DP=897;FS=8.489;HRun=0;HaplotypeScore=286.0002;InbreedingCoeff=0.3088;MQ=55.08;MQ0=4;MQRankSum=-1.148;QD=6.57;ReadPosRankSum=3.223;VQSLOD=0.7758;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:77.49:0,77,792	0/0:20,0:20:20.95:0,21,529	0/0:28,0:11:14.69:0,15,338	0/0:29,0:11:11.97:0,12,334	0/0:23,0:23:41.75:0,42,733	0/0:25,0:25:48.15:0,48,734	0/0:37,0:37:99:0,105,1505	0/0:33,0:33:98.98:0,99,1068	0/0:36,0:36:71.42:0,71,1095	0/0:40,0:40:32.32:0,32,785	0/0:18,0:18:32.99:0,33,445	0/1:38,3:41:42.68:237,0,43	0/1:33,2:36:12.55:393,0,13	0/1:38,1:39:99:136,0,105	0/0:58,0:58:79.27:0,79,1413	0/0:46,0:45:90.24:0,90,1423	0/0:34,0:34:69.20:0,69,1144	0/0:14,0:14:8.96:0,9,259	0/0:13,0:13:31.69:0,32,391	0/0:15,0:15:36.11:0,36,574	0/0:92,0:92:99:0,249,3217	0/0:29,0:29:50.38:0,50,636	0/1:21,1:22:2.89:95,0,3	1/1:31,1:32:8.12:381,8,0	0/0:35,0:35:45.04:0,45,1088	0/0:25,0:25:54.14:0,54,1023	0/0:30,0:30:90.12:0,90,1303	0/0:16,0:16:30.10:0,30,503
chr10	39635077	.	TAC	T	1872.52	PASS	AB=0.967;AC=11;AF=0.196;AN=56;BaseQRankSum=-7.263;DP=901;FS=0.892;HRun=0;HaplotypeScore=264.9250;InbreedingCoeff=0.9022;MQ=52.85;MQ0=7;MQRankSum=1.643;QD=12.57;ReadPosRankSum=1.297;VQSLOD=3.2065;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:27,3:30:61.06:427,61,0	1/1:18,0:18:33.53:273,34,0	0/1:27,0:9:5.85:6,0,65	0/0:32,0:10:12.25:0,12,142	0/0:24,0:24:39.97:0,40,848	0/0:25,0:25:48.16:0,48,752	0/0:37,0:37:99:0,102,1481	0/0:34,0:34:78.15:0,78,1145	0/0:35,0:35:72.20:0,72,1057	1/1:36,3:39:85.06:849,85,0	1/1:17,1:18:26.85:207,27,0	0/0:42,0:42:95.08:0,95,905	0/0:41,0:41:72.36:0,72,772	0/0:39,0:39:79.62:0,80,780	0/0:58,0:58:92.12:0,92,1398	0/0:47,0:46:90.25:0,90,1325	0/0:31,0:31:66.22:0,66,1044	1/1:14,1:15:32.42:287,32,0	0/0:11,0:11:30.08:0,30,415	0/0:18,0:18:45.08:0,45,648	0/0:90,0:90:99:0,204,2988	0/0:28,0:28:39.13:0,39,573	0/0:22,0:22:44.51:0,45,377	0/0:32,0:32:63.57:0,64,670	0/0:36,0:36:54.08:0,54,1090	0/0:25,0:25:31.78:0,32,936	0/0:32,0:32:78.20:0,78,1146	0/0:12,0:12:30.10:0,30,453
chr10	39635145	.	ACT	A	1266.48	PASS	AB=1.000;AC=19;AF=0.352;AN=54;BaseQRankSum=-3.567;DP=683;FS=17.109;HRun=0;HaplotypeScore=176.8117;InbreedingCoeff=0.7266;MQ=52.68;MQ0=19;MQRankSum=3.416;QD=5.53;ReadPosRankSum=2.231;VQSLOD=2.2537;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:18:14.22:0,14,109	0/0:11,0:11:8.95:0,9,69	0/0:52,0:27:15.05:0,15,161	0/0:61,0:37:35.78:0,36,297	0/0:28,0:25:8.99:0,9,76	0/0:13,0:12:0.72:0,1,29	0/1:18,0:17:0:0,0,0	1/1:25,9:33:26.91:222,27,0	0/0:26,0:26:12.14:0,12,65	0/0:22,0:22:35.81:0,36,287	./.	0/0:17,0:18:2.83:0,3,26	0/0:25,0:25:21.18:0,21,136	0/0:30,0:30:11.42:0,11,79	0/0:41,0:41:5:0,5,27	0/0:37,0:38:11.61:0,12,93	0/0:17,0:17:8.91:0,9,63	0/0:11,0:11:19.66:0,20,131	1/1:15,0:15:20.03:149,20,0	1/1:16,0:14:26.73:182,27,0	1/1:57,0:54:32.61:255,33,0	0/0:18,0:18:2.96:0,3,20	0/0:13,0:13:2.99:0,3,24	1/1:11,0:10:0.47:1,0,0	1/1:26,0:25:11.86:81,12,0	1/1:22,0:21:38.42:289,38,0	1/1:25,0:25:35.58:249,36,0	1/1:5,0:5:2.47:19,2,0
chr10	39635167	.	TCTCA	T	1778.33	PASS	AB=0.993;AC=21;AF=0.389;AN=54;BaseQRankSum=-3.297;DP=554;FS=9.667;HRun=0;HaplotypeScore=168.9723;InbreedingCoeff=0.4927;MQ=41.44;MQ0=21;MQRankSum=2.980;QD=6.51;ReadPosRankSum=0.459;VQSLOD=2.0040;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:16:14.32:0,14,110	0/0:8,0:8:14.85:0,15,133	0/0:32,0:12:15.05:0,15,161	0/0:43,0:24:35.78:0,36,297	0/0:25,0:23:10.40:0,10,78	0/0:11,0:10:10.72:0,11,94	0/0:12,0:11:6.49:0,6,83	1/1:16,0:15:32.84:271,33,0	0/0:18,0:18:15.81:0,16,175	0/0:17,0:17:47.44:0,47,360	./.	0/1:13,0:13:10.81:11,0,27	0/0:24,0:24:30.26:0,30,314	0/0:23,0:23:11.42:0,11,80	0/1:35,0:34:11.38:26,0,11	0/1:32,0:32:50.74:51,0,78	0/0:10,0:10:8.91:0,9,63	0/0:12,0:10:19.66:0,20,131	1/1:1,8:9:23.12:200,23,0	1/1:19,0:17:25.97:181,26,0	1/1:46,0:43:47.06:359,47,0	0/1:18,0:16:14.87:16,0,15	0/0:16,0:16:2.99:0,3,25	1/1:10,0:9:0.35:1,0,0	0/1:26,1:25:68.14:91,0,68	1/1:20,0:19:27.28:338,27,0	1/1:27,0:27:39.26:400,39,0	1/1:1,0:1:2.97:20,3,0
chr10	39635169	.	T	TCACACACA	898.50	PASS	AB=0.988;AC=24;AF=0.522;AN=46;BaseQRankSum=1.687;DP=547;FS=2.641;HRun=0;HaplotypeScore=217.6439;InbreedingCoeff=0.3690;MQ=39.68;MQ0=20;MQRankSum=-2.366;QD=3.79;ReadPosRankSum=-3.024;VQSLOD=2.3685;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:18,0:16:0.23:1,0,0	1/1:10,0:10:13.59:204,14,0	./.	./.	1/1:23,0:21:1.41:4,1,0	1/1:6,4:11:7.27:155,7,0	1/1:13,0:12:6.49:150,6,0	0/0:17,0:16:8.96:0,9,99	1/1:10,7:19:11.87:337,12,0	0/1:18,0:18:21.12:114,0,21	1/1:12,0:11:1.25:3,1,0	0/1:13,0:13:22.77:23,0,56	0/0:24,0:24:12.60:0,13,158	1/1:21,0:22:0.47:2,0,0	0/0:34,0:33:4.86:0,5,84	0/1:32,0:32:37.32:37,0,255	./.	./.	0/0:9,0:9:5.89:0,6,77	1/1:19,0:17:0.47:1,0,0	0/0:47,0:43:12.90:0,13,320	0/0:17,0:15:0.41:0,0,63	1/1:10,0:15:0.47:2,0,0	1/1:9,0:9:1.25:3,1,0	0/0:24,0:24:14.40:0,14,346	0/0:20,0:19:9.03:0,9,198	0/0:26,0:26:23.81:0,24,470	./.
chr10	39635757	.	G	GA	2009.56	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-7.980;DP=658;FS=14.996;HRun=4;HaplotypeScore=63.8382;InbreedingCoeff=0.9964;MQ=89.39;MQ0=0;MQRankSum=-2.929;QD=30.45;ReadPosRankSum=-0.653;VQSLOD=2.1616;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,117,1326	0/0:8,0:8:24.07:0,24,272	0/0:31,0:31:68.07:0,68,893	0/0:26,0:25:57.12:0,57,626	0/0:27,0:27:81.19:0,81,903	1/1:1,18:19:42.14:574,42,0	1/1:3,18:21:54.18:738,54,0	0/0:34,0:34:84.20:0,84,929	1/1:2,24:26:63.17:840,63,0	0/0:25,0:25:64.40:0,64,701	0/0:26,0:26:75.21:0,75,850	0/0:22,0:22:57.15:0,57,637	0/0:20,0:20:60.17:0,60,680	0/0:17,0:17:48.12:0,48,534	0/0:22,0:22:66.19:0,66,748	0/0:21,0:21:57.16:0,57,646	0/0:38,0:38:99:0,105,1179	0/0:37,0:37:99:0,102,1129	0/0:17,0:17:48.14:0,48,544	0/0:22,0:22:60.15:0,60,671	0/0:31,0:31:87.25:0,87,986	0/0:18,0:18:51.10:0,51,564	0/0:14,0:14:42.12:0,42,475	0/0:17,0:17:48.09:0,48,517	0/0:16,0:16:45.09:0,45,497	0/0:28,0:28:75.21:0,75,850	0/0:27,0:27:78.22:0,78,883	0/0:6,0:6:18.05:0,18,204
chr10	39637103	.	ATC	A	1145.92	PASS	AB=0.850;AC=20;AF=0.417;AN=48;BaseQRankSum=6.026;DP=256;FS=4.940;HRun=0;HaplotypeScore=48.7388;InbreedingCoeff=0.4125;MQ=66.02;MQ0=8;MQRankSum=-1.083;QD=10.51;ReadPosRankSum=0.102;VQSLOD=2.7713;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:29.93:0,30,446	0/0:10,0:10:15.04:0,15,237	0/0:14,0:3:2.84:0,3,14	0/0:24,0:13:5.13:0,5,98	1/1:2,0:2:2.99:24,3,0	1/1:2,14:15:21.07:300,21,0	0/0:2,2:4:2.98:0,3,22	0/1:20,16:35:99:390,0,184	./.	0/0:17,0:16:42.13:0,42,711	0/0:9,0:9:12.02:0,12,225	0/0:5,0:5:11.98:0,12,100	0/0:13,0:12:21.06:0,21,350	0/0:8,0:8:18.06:0,18,341	1/1:2,0:2:3:25,3,0	./.	0/1:11,0:11:17.73:52,0,18	0/0:19,0:18:54.13:0,54,921	0/1:6,0:6:72.66:81,0,73	1/1:1,1:2:2.98:22,3,0	./.	./.	1/1:4,0:4:2.84:14,3,0	0/0:4,0:4:11.99:0,12,100	0/1:7,5:12:53.52:106,0,54	1/1:3,3:6:17.84:128,18,0	1/1:5,2:7:17.88:131,18,0	1/1:4,1:3:3.53:39,4,0
chr10	39637105	.	C	CTA	2347.24	PASS	AB=0.907;AC=23;AF=0.460;AN=50;BaseQRankSum=3.758;DP=272;FS=2.104;HRun=0;HaplotypeScore=49.2884;InbreedingCoeff=0.4184;MQ=68.99;MQ0=6;MQRankSum=-2.746;QD=16.53;ReadPosRankSum=-1.210;VQSLOD=3.2217;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:30.09:0,30,389	0/0:10,0:10:14.94:0,15,179	0/0:14,0:3:3.89:0,4,30	0/1:26,0:15:22.40:22,0,59	0/1:2,0:2:0:0,0,0	0/0:16,0:15:12.46:0,12,33	0/0:4,0:4:2.94:0,3,18	1/1:29,12:41:60.37:1292,60,0	0/1:6,0:6:0:0,0,0	0/0:18,0:17:40.92:0,41,503	0/0:9,0:9:12.04:0,12,165	1/1:6,0:6:3.90:8,4,0	0/0:13,0:12:21.04:0,21,267	0/0:9,0:9:21.05:0,21,268	1/1:2,0:2:3:25,3,0	0/1:3,0:3:0.02:0,0,0	0/1:11,0:11:15.67:81,0,16	0/0:19,0:18:51.09:0,51,651	0/1:2,4:6:46.61:141,0,47	1/1:1,1:2:3.01:49,3,0	./.	./.	./.	1/1:5,0:5:4.79:10,5,0	0/1:8,4:12:19.72:198,0,20	1/1:4,3:7:18.06:291,18,0	1/1:4,5:9:18.01:293,18,0	1/1:1,2:3:5.04:97,5,0
chr10	39637109	.	ATC	A	1444.89	PASS	AB=0.890;AC=25;AF=0.500;AN=50;BaseQRankSum=5.454;DP=285;FS=3.648;HRun=0;HaplotypeScore=53.3626;InbreedingCoeff=0.4499;MQ=68.31;MQ0=6;MQRankSum=0.092;QD=10.32;ReadPosRankSum=0.098;VQSLOD=3.1073;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:35.12:0,35,558	0/0:10,0:10:11.93:0,12,183	0/0:14,0:3:6:0,6,54	0/0:27,0:15:6.37:0,6,94	1/1:3,0:3:2.99:24,3,0	1/1:16,0:15:21.07:301,21,0	0/0:4,0:4:2.98:0,3,22	0/1:30,16:45:33.83:595,0,34	1/1:6,0:6:0.47:1,0,0	0/0:18,0:17:41.60:0,42,684	0/0:9,0:9:12.02:0,12,224	1/1:6,0:6:8.88:27,9,0	0/0:13,0:12:15.52:0,16,281	0/0:12,0:12:30.06:0,30,449	1/1:3,0:3:5.99:50,6,0	0/1:3,0:3:0:0,0,0	0/1:12,0:12:17.45:52,0,17	0/0:19,0:18:49.08:0,49,833	0/1:7,0:7:35.97:105,0,36	1/1:1,1:2:2.98:22,3,0	./.	./.	./.	1/1:5,0:5:11.10:33,11,0	0/1:7,5:12:28.11:106,0,28	1/1:4,3:7:17.40:127,17,0	1/1:7,2:9:17.85:130,18,0	1/1:2,1:3:5:41,5,0
chr10	39637111	.	C	CTA	2878.33	PASS	AB=1.000;AC=27;AF=0.540;AN=50;BaseQRankSum=3.716;DP=293;FS=0.597;HRun=0;HaplotypeScore=49.5359;InbreedingCoeff=0.2906;MQ=67.87;MQ0=6;MQRankSum=-1.643;QD=14.54;ReadPosRankSum=-1.736;VQSLOD=2.8961;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:11.84:0,12,413	0/1:10,0:10:7.89:8,0,108	0/0:15,0:3:5.88:0,6,36	0/1:28,0:16:29.25:29,0,101	0/1:3,0:3:0:0,0,0	0/0:16,0:15:12.46:0,12,32	0/0:5,0:5:2.94:0,3,18	1/1:47,0:46:65.11:1280,65,0	1/1:6,0:6:0.47:1,0,0	0/1:19,0:18:6.14:6,0,434	0/0:9,0:9:12.04:0,12,160	1/1:1,7:8:12.04:207,12,0	0/1:13,0:12:3.17:3,0,182	0/0:12,0:12:24.07:0,24,303	1/1:3,0:3:5.99:50,6,0	0/1:3,0:3:0.02:0,0,0	0/1:12,0:12:14.48:82,0,14	0/0:19,0:18:19.45:0,19,567	0/1:7,0:7:22.60:163,0,23	1/1:2,0:2:3.01:49,3,0	./.	./.	./.	1/1:0,5:5:15.05:258,15,0	0/1:12,0:12:19.73:198,0,20	1/1:8,0:8:21.03:310,21,0	1/1:9,0:9:18.01:294,18,0	1/1:3,0:3:6.02:98,6,0
chr10	39637167	.	T	TC	56.02	PASS	AB=0.845;AC=3;AF=0.056;AN=54;BaseQRankSum=2.999;DP=390;FS=11.028;HRun=0;HaplotypeScore=49.7191;InbreedingCoeff=0.1034;MQ=51.75;MQ0=24;MQRankSum=0.497;QD=2.95;ReadPosRankSum=-2.486;VQSLOD=0.8917;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:51.15:0,51,692	0/0:8,0:8:6.02:0,6,84	0/0:21,0:4:4.45:0,4,24	./.	0/0:18,0:18:27.09:0,27,378	0/0:15,0:15:42.13:0,42,570	0/0:11,0:11:27.07:0,27,359	0/0:16,0:15:45.13:0,45,596	0/0:15,0:15:36.12:0,36,504	0/0:36,0:35:99:0,99,1379	0/0:10,0:10:18.06:0,18,252	0/0:18,0:18:45.15:0,45,629	0/0:16,0:16:42.13:0,42,571	0/0:18,0:18:47.91:0,48,636	0/0:18,0:18:48.15:0,48,654	0/0:18,0:18:54.18:0,54,755	0/0:16,0:16:30.05:0,30,398	0/0:15,0:15:45.15:0,45,629	0/0:6,0:3:9.03:0,9,126	0/0:1,0:1:3.01:0,3,41	0/1:2,0:2:0:0,0,0	0/0:11,0:11:12.04:0,12,168	0/0:7,0:7:18.06:0,18,252	0/0:11,0:11:33.11:0,33,462	0/0:7,0:7:21.07:0,21,292	0/0:10,0:9:27.09:0,27,377	0/1:8,3:11:68.06:68,0,184	0/1:4,2:6:71.87:76,0,72
chr10	39637415	.	C	CAACAAAACAAAACAA	22405.56	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=1.938;DP=556;FS=6.116;HRun=0;HaplotypeScore=202.0926;InbreedingCoeff=0.7885;MQ=61.97;MQ0=2;MQRankSum=-6.552;QD=47.77;ReadPosRankSum=-0.875;VQSLOD=3.9752;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:12,0:34:45.15:1494,45,0	1/1:4,0:11:9.03:290,9,0	0/0:25,0:22:26.29:0,26,736	0/0:16,0:15:2.25:0,2,400	1/1:1,9:20:36.12:1972,36,0	1/1:3,0:24:27.09:886,27,0	1/1:7,0:17:15.05:478,15,0	1/1:25,0:36:51.14:1021,51,0	1/1:5,0:13:18.06:579,18,0	1/1:9,0:41:96.79:2574,97,0	1/1:7,0:21:33.11:816,33,0	0/0:25,0:25:45.15:0,45,1748	1/1:9,0:20:15.05:482,15,0	1/1:12,0:23:24.08:825,24,0	1/1:13,12:31:33.11:2383,33,0	1/1:7,8:23:15.05:1084,15,0	1/1:8,0:16:0.91:1182,1,0	1/1:6,0:13:15.05:456,15,0	1/1:8,0:28:63.16:1320,63,0	1/1:6,0:15:12.04:422,12,0	1/1:5,0:9:6.02:171,6,0	1/1:3,5:11:21.03:1302,21,0	0/0:7,0:7:15.05:0,15,553	0/0:12,0:12:24.08:0,24,714	1/1:3,0:8:3.01:96,3,0	1/1:10,0:26:54.17:1591,54,0	1/1:5,0:22:20.92:675,21,0	1/1:1,0:6:7.30:305,7,0
chr10	39638410	.	CA	C	2469.79	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=4.720;DP=560;FS=0.993;HRun=2;HaplotypeScore=69.6519;InbreedingCoeff=0.9915;MQ=56.88;MQ0=17;MQRankSum=3.043;QD=30.49;ReadPosRankSum=2.433;VQSLOD=3.3691;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,132,1931	0/0:6,0:6:18.03:0,18,247	0/0:22,0:7:21.06:0,21,277	0/0:26,0:8:23.99:0,24,318	1/1:0,21:21:57.12:718,57,0	0/0:27,0:27:81.25:0,81,1172	0/0:17,0:17:39.13:0,39,582	0/0:24,0:23:69.23:0,69,1034	0/0:9,0:9:24.08:0,24,360	0/0:15,0:15:45.14:0,45,640	0/0:27,0:26:72.24:0,72,1063	0/0:16,0:16:48.16:0,48,719	0/0:15,0:15:42.13:0,42,610	0/0:22,0:22:66.20:0,66,951	1/1:2,16:17:48.16:623,48,0	1/1:0,9:9:21.07:273,21,0	1/1:1,27:26:66.21:857,66,0	0/0:34,0:34:99:0,102,1522	0/0:22,0:19:57.18:0,57,821	0/0:22,0:21:63.17:0,63,906	0/0:20,0:20:57.19:0,57,852	1/1:0,5:5:14.96:173,15,0	0/0:15,0:15:45.15:0,45,665	0/0:20,0:20:60.19:0,60,878	0/0:19,0:19:54.14:0,54,783	0/0:14,0:14:42.14:0,42,629	0/0:23,0:23:69.13:0,69,1005	0/0:19,0:18:51.17:0,51,757
chr10	39638535	.	G	GA	8015.43	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-8.760;DP=599;FS=16.268;HRun=9;HaplotypeScore=74.1520;InbreedingCoeff=0.9933;MQ=62.72;MQ0=0;MQRankSum=-0.959;QD=26.81;ReadPosRankSum=0.433;VQSLOD=3.6655;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,32:34:78.21:863,78,0	1/1:2,9:11:21.06:232,21,0	0/0:19,0:18:41.93:0,42,350	0/0:9,0:9:11.01:0,11,124	0/0:35,2:37:59.76:0,60,742	0/0:28,0:28:71.98:0,72,624	0/0:14,0:14:35.88:0,36,302	1/1:6,23:29:66.14:711,66,0	0/0:14,0:14:35.98:0,36,312	1/1:3,16:20:24.92:486,25,0	1/1:2,22:24:57.15:628,57,0	0/0:12,0:12:32.99:0,33,286	0/0:2,0:22:38.48:0,38,112	0/0:1,0:15:26.48:0,26,78	0/0:18,0:18:38.98:0,39,338	0/0:19,0:19:47.99:0,48,416	0/0:40,0:39:92.97:0,93,807	1/1:3,26:29:63.17:697,63,0	1/1:2,21:23:60.14:651,60,0	1/1:3,21:25:59.99:642,60,0	1/1:1,11:12:30.08:329,30,0	0/0:12,0:12:23.99:0,24,208	0/0:15,0:15:32.97:0,33,283	0/0:25,0:25:65.98:0,66,572	1/1:1,22:23:63.17:697,63,0	1/1:0,21:21:63.17:697,63,0	1/1:2,28:30:78.21:862,78,0	1/1:2,16:18:48.11:521,48,0
chr10	39638917	.	T	TG	4839.88	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-8.002;DP=704;FS=14.251;HRun=7;HaplotypeScore=82.4237;InbreedingCoeff=0.9954;MQ=86.42;MQ0=0;MQRankSum=-2.672;QD=26.59;ReadPosRankSum=1.483;VQSLOD=4.1944;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,38:41:87.25:1039,87,0	1/1:0,10:10:24.07:290,24,0	0/0:26,0:26:60.03:0,60,560	0/0:27,0:27:63.26:0,63,609	0/0:26,0:26:57.07:0,57,542	0/0:21,0:21:48.05:0,48,458	0/0:24,0:24:60.08:0,60,574	0/0:33,0:33:87.11:0,87,833	0/0:28,0:28:78.10:0,78,747	1/1:4,32:36:93.29:1123,93,0	1/1:2,14:16:36.11:435,36,0	1/1:2,31:33:72.08:869,72,0	0/0:24,0:24:60.09:0,60,579	0/0:29,0:29:75.12:0,75,724	0/0:32,0:32:81.09:0,81,769	0/0:16,0:16:45.06:0,45,429	0/0:38,0:38:99:0,108,1043	1/1:2,9:11:27.08:326,27,0	0/0:19,0:19:45.06:0,45,432	0/0:22,0:22:48.05:0,48,456	0/0:35,0:35:99:0,102,985	0/0:23,0:23:54.08:0,54,521	1/1:2,13:15:18.06:217,18,0	1/1:3,17:20:45.14:541,45,0	0/0:27,0:27:75.12:0,75,723	0/0:32,1:33:53.85:0,54,794	0/0:34,0:33:96.15:0,96,927	0/0:5,0:5:15.02:0,15,145
chr10	39639855	.	GT	G	8223.26	PASS	AB=0.885;AC=39;AF=0.696;AN=56;BaseQRankSum=8.753;DP=719;FS=0.336;HRun=12;HaplotypeScore=78.0379;InbreedingCoeff=0.8943;MQ=69.85;MQ0=3;MQRankSum=-2.158;QD=15.84;ReadPosRankSum=3.296;VQSLOD=5.8181;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,42:53:74.59:701,75,0	1/1:0,10:11:25.93:192,26,0	0/0:27,1:20:8.58:0,9,232	0/0:17,1:15:6.38:0,6,248	0/0:28,0:29:62.80:0,63,585	1/1:3,19:22:56.76:441,57,0	1/1:6,25:33:54.21:504,54,0	1/1:11,25:37:79.21:589,79,0	1/1:5,18:25:21.45:330,21,0	1/1:5,31:36:89.58:691,90,0	1/1:2,16:19:19.41:324,19,0	1/1:5,25:30:65.74:511,66,0	0/1:19,3:23:9.78:10,0,427	0/0:26,2:28:33.82:0,34,512	0/0:15,0:15:39.06:0,39,386	0/0:22,0:22:60:0,60,579	0/0:32,0:32:84.16:0,84,847	1/1:2,17:20:54.65:406,55,0	1/1:5,16:21:47.70:361,48,0	1/1:4,22:26:51.54:389,52,0	1/1:1,19:21:46.85:354,47,0	0/0:28,0:28:63.18:0,63,640	1/1:3,16:20:40.87:308,41,0	1/1:1,25:27:62.61:478,63,0	1/1:5,18:23:56.74:438,57,0	1/1:5,26:33:80.80:596,81,0	1/1:5,25:30:56.32:440,56,0	1/1:1,7:8:20.92:163,21,0
chr10	39642733	.	T	TC	2195.48	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-10.439;DP=713;FS=1.049;HRun=4;HaplotypeScore=70.0226;InbreedingCoeff=0.9969;MQ=84.52;MQ0=0;MQRankSum=-2.614;QD=31.82;ReadPosRankSum=0.957;VQSLOD=4.1059;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,123,1372	0/0:12,0:12:33.09:0,33,374	0/0:23,0:23:63.16:0,63,698	0/0:21,0:21:54.10:0,54,591	0/0:7,0:7:21.04:0,21,223	1/1:0,19:19:45.15:615,45,0	1/1:0,28:28:72.20:985,72,0	0/0:34,0:34:87.24:0,87,979	1/1:1,21:22:54.18:739,54,0	0/0:22,0:22:63.17:0,63,706	0/0:15,0:15:42.12:0,42,476	0/0:27,0:27:72.20:0,72,817	0/0:24,0:24:69.20:0,69,782	0/0:38,0:38:99:0,111,1258	0/0:27,0:27:78.22:0,78,884	0/0:22,0:22:57.16:0,57,647	0/0:37,0:37:85.79:0,86,1147	0/0:35,0:35:99:0,99,1123	0/0:28,0:28:72.10:0,72,799	0/0:18,0:18:45.13:0,45,510	0/0:46,0:46:99:0,129,1462	0/0:26,0:26:75.20:0,75,841	0/0:16,0:16:45.11:0,45,501	0/0:44,0:44:99:0,129,1462	0/0:18,0:18:34.36:0,34,507	0/0:26,0:25:72.21:0,72,817	0/0:25,0:25:75.21:0,75,850	0/0:7,0:7:21.06:0,21,238
chr10	39644702	.	AGAATGAATGGAT	A	3898.45	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.432;DP=816;FS=4.003;HRun=0;HaplotypeScore=279.4216;InbreedingCoeff=0.9999;MQ=75.56;MQ0=1;MQRankSum=-9.790;QD=67.21;ReadPosRankSum=1.746;VQSLOD=2.7028;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,114,5027	0/0:13,0:13:39.07:0,39,1636	0/0:35,0:34:78.05:0,78,2282	0/0:25,0:22:43.03:0,43,687	0/0:44,0:44:99:0,114,5179	0/0:22,0:22:60.17:0,60,3005	0/0:22,0:22:60.15:0,60,2754	0/0:36,0:36:93.23:0,93,3326	0/0:36,0:36:96.29:0,96,5119	0/0:34,0:34:87.11:0,87,3504	0/0:15,0:15:43.90:0,44,1453	0/0:34,0:34:87.27:0,87,4621	1/1:3,26:29:51.18:1848,51,0	1/1:4,25:29:57.20:2050,57,0	0/0:39,0:39:99:0,108,5118	0/0:33,0:33:87.22:0,87,3977	0/0:16,0:16:45.10:0,45,1997	0/0:20,0:20:54.06:0,54,2325	0/0:22,0:22:54.03:0,54,1834	0/0:24,0:24:69.20:0,69,3459	0/0:25,0:25:75.18:0,75,3397	0/0:31,0:31:93.22:0,93,4425	0/0:24,0:24:57.18:0,57,2931	0/0:27,0:27:63.19:0,63,3318	0/0:41,0:41:99:0,108,4919	0/0:37,0:37:96.21:0,96,3807	0/0:46,0:46:99:0,114,5221	0/0:18,0:18:54.12:0,54,2879
chr10	39645126	.	C	CTC	523.13	PASS	AB=1.000;AC=36;AF=0.818;AN=44;DP=448;FS=0.000;HRun=0;HaplotypeScore=91.1732;InbreedingCoeff=0.2916;MQ=31.83;MQ0=107;QD=1.40;VQSLOD=1.3205;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	1/1:6,0:6:6:53,6,0	./.	./.	0/1:16,0:12:0:0,0,0	1/1:16,0:13:2.99:24,3,0	1/1:18,0:14:3:26,3,0	1/1:27,0:12:2.24:5,2,0	0/1:15,0:14:0:0,0,0	1/1:15,0:14:8.51:73,9,0	0/1:13,0:11:0:0,0,0	1/1:23,0:23:2.95:27,3,0	1/1:13,0:11:6.02:83,6,0	1/1:14,0:13:12.02:149,12,0	0/1:26,0:19:0:0,0,0	0/1:21,0:15:0.18:0,0,0	0/1:18,0:12:0:0,0,0	./.	1/1:7,0:5:1.25:3,1,0	1/1:20,0:19:2.99:24,3,0	./.	./.	0/1:20,0:20:0:1,0,0	1/1:14,5:15:5.98:46,6,0	1/1:18,0:17:3.41:29,3,0	1/1:21,0:16:6.48:32,6,0	1/1:20,0:17:3.85:22,4,0	0/1:8,0:6:0:0,0,0
chr10	39645226	.	CA	C	242.41	PASS	AB=1.000;AC=7;AF=0.152;AN=46;BaseQRankSum=0.405;DP=447;FS=0.000;HRun=1;HaplotypeScore=33.5211;InbreedingCoeff=0.4840;MQ=18.70;MQ0=296;MQRankSum=-1.762;QD=3.32;ReadPosRankSum=-0.552;VQSLOD=-0.6298;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:3:6.02:0,6,95	0/0:7,0:6:14.98:0,15,209	./.	./.	0/0:25,0:17:21.07:0,21,334	1/1:0,24:6:18.06:251,18,0	1/1:3,8:2:6.02:84,6,0	./.	1/1:0,13:4:2.98:21,3,0	0/0:24,0:15:45.15:0,45,718	0/0:17,0:13:15.05:0,15,238	0/0:15,0:4:3.01:0,3,48	0/0:18,0:4:6.02:0,6,95	0/0:11,0:2:3.01:0,3,48	0/1:25,0:3:0:0,0,0	0/0:16,0:3:2.94:0,3,18	0/0:18,0:1:3.01:0,3,48	./.	0/0:14,0:1:3.01:0,3,48	0/0:14,0:11:30.10:0,30,477	./.	0/0:15,0:9:14.97:0,15,208	0/0:22,0:17:26.88:0,27,429	0/0:18,0:2:3.01:0,3,48	0/0:16,0:7:15.05:0,15,239	0/0:21,0:7:21.07:0,21,335	0/0:16,0:7:9.03:0,9,135	0/0:10,0:5:3.01:0,3,48
chr10	39646844	.	G	GC	2316.49	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-8.228;DP=769;FS=4.710;HRun=2;HaplotypeScore=74.3159;InbreedingCoeff=1.0000;MQ=83.78;MQ0=0;MQRankSum=-1.024;QD=35.64;ReadPosRankSum=1.310;VQSLOD=4.2268;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,141,1681	0/0:15,0:15:42.08:0,42,490	0/0:30,0:30:87.26:0,87,1058	0/0:23,0:23:49.14:0,49,758	0/0:26,0:26:66.21:0,66,817	0/0:20,0:20:57.18:0,57,706	0/0:27,0:27:81.24:0,81,991	0/0:40,0:40:99:0,114,1363	0/0:23,0:23:66.21:0,66,818	0/0:30,0:30:87.27:0,87,1075	0/0:21,0:21:63.20:0,63,779	0/0:31,0:31:87.26:0,87,1066	1/1:3,27:31:75.22:1056,75,0	1/1:1,33:34:96.32:1382,96,0	0/0:33,0:33:93.28:0,93,1140	0/0:25,0:25:75.21:0,75,915	0/0:28,0:28:78.23:0,78,953	0/0:24,0:24:69.17:0,69,854	0/0:20,0:20:57.12:0,57,665	0/0:27,0:27:81.25:0,81,989	0/0:37,0:37:99:0,108,1301	0/0:27,0:27:78.24:0,78,964	0/0:25,0:25:69.22:0,69,854	0/0:34,0:34:96.21:0,96,1134	0/0:23,0:23:63.10:0,63,744	0/0:26,0:26:72.18:0,72,865	0/0:26,0:26:72.20:0,72,867	0/0:15,0:15:45.14:0,45,557
chr10	39647135	.	GT	G	4744.82	PASS	AB=0.979;AC=44;AF=0.786;AN=56;BaseQRankSum=10.083;DP=589;FS=5.413;HRun=1;HaplotypeScore=251.6951;InbreedingCoeff=-0.2845;MQ=51.22;MQ0=2;MQRankSum=-9.317;QD=8.06;ReadPosRankSum=10.794;VQSLOD=1.2267;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:40,1:40:20.15:205,0,20	0/1:6,0:6:7.60:52,0,8	0/1:12,1:10:14.71:15,0,79	0/1:12,1:11:23.39:23,0,33	1/1:21,0:19:7.99:42,8,0	0/1:31,0:31:5.24:259,0,5	0/1:27,0:27:27.90:225,0,28	0/1:22,0:22:99:103,0,99	1/1:20,0:20:38.36:240,38,0	1/1:30,1:31:66.89:372,67,0	1/1:14,0:14:4.15:111,4,0	1/1:29,1:30:15.03:293,15,0	1/1:25,0:25:30.17:283,30,0	0/1:21,0:21:1.71:189,0,2	0/1:32,0:32:12.66:282,0,13	1/1:22,0:22:12.15:220,12,0	1/1:16,0:16:42.20:204,42,0	1/1:8,0:8:3.01:65,3,0	1/1:16,1:16:20.13:127,20,0	1/1:21,0:21:39.74:199,40,0	0/1:29,0:28:9.27:100,0,9	1/1:21,0:21:19.83:189,20,0	0/1:10,1:11:23.30:87,0,23	0/1:22,0:22:11.62:131,0,12	1/1:22,0:22:0.95:173,1,0	1/1:23,0:23:10.70:225,11,0	1/1:21,0:21:33.85:251,34,0	1/1:9,0:9:4.52:78,5,0
chr10	39647144	.	TA	T	6853.26	PASS	AB=0.985;AC=51;AF=0.911;AN=56;BaseQRankSum=4.681;DP=587;FS=0.571;HRun=1;HaplotypeScore=245.3374;InbreedingCoeff=-0.1023;MQ=55.89;MQ0=2;MQRankSum=-1.258;QD=11.68;ReadPosRankSum=9.056;VQSLOD=2.8563;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:34,3:36:48.01:422,48,0	0/1:5,0:5:2.84:55,0,3	0/1:11,0:10:15.91:16,0,73	0/1:15,0:13:53.62:71,0,54	1/1:24,0:22:13.78:73,14,0	1/1:29,1:30:26.32:390,26,0	0/1:25,0:24:4.05:250,0,4	0/1:18,0:18:8.97:173,0,9	1/1:21,0:21:6.34:237,6,0	1/1:31,0:31:31.01:395,31,0	1/1:13,0:13:29.56:192,30,0	1/1:27,0:27:47.06:393,47,0	1/1:27,0:27:42.79:407,43,0	1/1:19,0:19:18.20:273,18,0	1/1:32,0:32:70.91:459,71,0	1/1:22,0:22:26.85:286,27,0	1/1:17,0:17:46.59:267,47,0	1/1:8,0:8:6.44:88,6,0	1/1:14,0:14:0.14:142,0,0	1/1:25,0:25:33.14:262,33,0	1/1:30,1:30:20.11:200,20,0	1/1:18,2:20:47.77:329,48,0	1/1:13,0:13:28.80:164,29,0	1/1:23,0:23:7.84:201,8,0	1/1:23,0:23:27.81:288,28,0	1/1:22,0:22:61.84:364,62,0	1/1:24,1:25:48.65:355,49,0	1/1:8,0:8:4.13:102,4,0
chr10	39647158	.	AC	A	744.79	PASS	AB=0.913;AC=7;AF=0.125;AN=56;BaseQRankSum=1.684;DP=584;FS=12.339;HRun=9;HaplotypeScore=242.4698;InbreedingCoeff=0.5720;MQ=64.01;MQ0=2;MQRankSum=-4.974;QD=8.76;ReadPosRankSum=2.784;VQSLOD=-0.3221;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:36:46.80:0,47,288	0/0:7,0:7:18.01:0,18,190	0/0:20,0:18:43.87:0,44,395	0/0:23,0:22:50.11:0,50,538	0/0:20,0:18:26.06:0,26,272	0/0:23,0:23:39.12:0,39,450	0/0:22,0:21:44.88:0,45,430	0/1:18,2:20:18.80:19,0,302	0/0:20,0:20:39.07:0,39,435	0/0:29,0:30:69.16:0,69,781	0/1:12,1:13:9.40:9,0,155	0/0:25,0:25:51.07:0,51,559	1/1:1,25:26:57.01:521,57,0	1/1:2,15:17:36.01:329,36,0	0/0:28,0:28:53.94:0,54,539	0/0:24,0:25:62.92:0,63,668	0/0:18,0:18:29.96:0,30,313	0/0:10,0:10:24.07:0,24,274	0/0:15,0:15:24.07:0,24,275	0/0:23,0:23:36.02:0,36,397	0/0:31,0:31:32.94:0,33,327	0/0:17,0:17:33.01:0,33,362	0/0:14,0:14:26.92:0,27,269	0/0:24,0:24:36.06:0,36,400	0/0:21,0:21:42.04:0,42,455	0/0:21,0:21:48.10:0,48,536	0/0:22,0:23:29.43:0,29,517	0/1:8,1:9:0.39:0,0,240
chr10	39647413	.	C	CAAAA	15883.52	PASS	AB=1.000;AC=45;AF=0.804;AN=56;BaseQRankSum=1.481;DP=649;FS=5.918;HRun=10;HaplotypeScore=118.1929;InbreedingCoeff=0.8794;MQ=69.31;MQ0=1;MQRankSum=-4.597;QD=28.77;ReadPosRankSum=-1.430;VQSLOD=2.8114;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,0:29:51.12:632,51,0	0/0:6,0:7:15:0,15,192	0/1:13,0:14:12.75:13,0,250	0/0:14,0:14:11.81:0,12,168	1/1:8,0:35:75.03:900,75,0	1/1:6,0:31:65.87:732,66,0	1/1:1,0:19:44.97:535,45,0	1/1:31,6:40:61.61:1145,62,0	1/1:7,0:18:21.07:282,21,0	0/0:27,0:27:60.07:0,60,835	0/0:19,0:19:45.08:0,45,636	1/1:9,9:18:33.11:737,33,0	1/1:13,11:29:33.11:702,33,0	1/1:11,12:24:42.14:940,42,0	1/1:1,1:21:42.05:534,42,0	1/1:12,2:28:36.12:530,36,0	1/1:6,1:34:71.63:810,72,0	0/0:29,0:30:81.08:0,81,1083	1/1:9,2:12:21.05:446,21,0	1/1:10,10:27:48.16:973,48,0	1/1:3,14:19:31.92:680,32,0	1/1:4,0:19:37.63:445,38,0	1/1:3,10:15:23.73:433,24,0	1/1:6,20:28:36.57:799,37,0	1/1:11,17:31:51.17:1115,51,0	1/1:8,12:24:51.07:923,51,0	1/1:10,13:25:36.12:813,36,0	1/1:0,10:11:33.11:763,33,0
chr10	39650640	.	TGAGAGAGAGA	T	998.84	PASS	AB=0.890;AC=14;AF=0.250;AN=56;BaseQRankSum=4.904;DP=618;FS=0.757;HRun=0;HaplotypeScore=192.9054;InbreedingCoeff=0.4405;MQ=62.89;MQ0=8;MQRankSum=-1.410;QD=5.58;ReadPosRankSum=1.265;VQSLOD=2.3180;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:39:33.45:0,33,385	0/0:9,0:13:18.95:0,19,448	0/0:28,0:16:6.01:0,6,129	0/0:29,0:13:3.01:0,3,40	0/0:28,0:28:21.07:0,21,494	0/0:22,0:22:33.09:0,33,1011	0/0:31,0:29:36.08:0,36,1062	0/1:23,0:23:9.75:10,0,33	0/0:26,0:26:38.25:0,38,1093	0/0:18,0:18:33.11:0,33,1117	0/0:27,0:27:24.08:0,24,740	0/0:16,0:16:12.01:0,12,120	1/1:11,18:29:11.83:235,12,0	1/1:12,5:19:9.03:227,9,0	0/0:21,0:22:3.01:0,3,71	0/0:14,0:17:24.08:0,24,482	0/0:16,0:14:26.03:0,26,485	0/0:13,0:14:27.09:0,27,1000	1/1:9,0:11:6.93:70,7,0	0/0:23,0:24:0.49:0,0,23	0/0:21,0:20:6.71:0,7,87	0/0:24,0:25:15.05:0,15,464	0/0:18,0:18:12.01:0,12,169	0/1:23,0:22:19.01:19,0,36	1/1:18,1:27:6.78:81,7,0	0/1:11,0:15:7.43:210,0,7	0/1:14,2:20:28.61:228,0,29	1/1:10,0:10:5.91:82,6,0
chr10	39650663	.	GAGAGAGAGAGACAGACAGAC	G	4424.34	PASS	AB=0.893;AC=18;AF=0.321;AN=56;BaseQRankSum=0.444;DP=624;FS=7.508;HRun=0;HaplotypeScore=232.0753;InbreedingCoeff=0.5240;MQ=48.32;MQ0=27;MQRankSum=-4.686;QD=16.89;ReadPosRankSum=-2.358;VQSLOD=2.5920;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:47,0:46:16.84:17,0,377	0/0:20,0:18:31.35:0,31,1284	0/0:13,0:5:5.97:0,6,140	0/0:21,0:4:0:0,0,0	0/0:29,0:28:24.02:0,24,707	0/0:23,0:22:48.13:0,48,1997	0/0:27,0:24:41.72:0,42,1261	1/1:30,0:23:53.76:982,54,0	0/0:26,0:25:63.95:0,64,2245	0/0:16,0:15:42.11:0,42,2036	0/0:28,0:26:41.71:0,42,1543	0/0:23,0:22:6.02:0,6,96	0/1:34,0:31:27.81:28,0,664	0/1:22,0:22:74.76:75,0,789	0/0:18,0:17:3.01:0,3,71	0/0:21,0:19:25.79:0,26,704	0/0:15,0:13:26.98:0,27,743	0/0:20,0:20:1.07:0,1,2184	1/1:19,0:17:48.02:827,48,0	1/1:13,0:12:5:88,5,0	1/1:26,0:23:17.02:214,17,0	0/0:23,0:21:15.05:0,15,658	0/0:16,0:16:9.01:0,9,167	0/0:23,0:21:5.61:0,6,71	1/1:22,0:22:9.03:238,9,0	1/1:18,0:18:23.78:1099,24,0	1/1:20,0:18:27.27:694,27,0	0/1:2,6:7:10.59:162,0,11
chr10	39650673	.	GAC	G	1079.79	PASS	AB=0.982;AC=22;AF=0.407;AN=54;BaseQRankSum=5.032;DP=600;FS=2.425;HRun=0;HaplotypeScore=134.3703;InbreedingCoeff=-0.1294;MQ=40.65;MQ0=33;MQRankSum=-1.922;QD=2.90;ReadPosRankSum=-0.738;VQSLOD=2.6674;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:36,0:35:16.44:16,0,134	0/1:20,0:18:23.10:23,0,166	0/0:8,0:2:3.01:0,3,34	./.	0/0:23,0:22:7.76:0,8,41	0/1:20,1:20:71.69:133,0,72	0/1:25,2:24:99:105,0,100	0/1:29,0:20:11.21:191,0,11	0/1:24,3:25:76.55:306,0,77	0/0:15,0:14:0.77:0,1,343	0/0:25,0:23:28.08:0,28,283	1/1:19,2:20:3.01:40,3,0	0/0:38,0:34:10.04:0,10,147	0/0:27,0:26:16.38:0,16,137	1/1:29,0:28:0.89:2,1,0	0/1:23,0:21:8.67:63,0,9	0/1:17,0:15:3.86:4,0,68	0/0:23,0:23:27.98:0,28,489	0/1:20,0:18:38.30:90,0,38	0/0:9,0:7:2.95:0,3,24	0/0:20,0:17:2.99:0,3,24	0/0:22,1:21:8.12:0,8,51	1/1:13,0:13:4.24:28,4,0	1/1:19,4:21:5.05:48,5,0	0/1:23,0:23:8.08:8,0,54	0/1:18,0:16:13.83:99,0,14	0/1:18,0:16:13.53:58,0,14	1/1:7,0:6:2.84:14,3,0
chr10	39650681	.	GACAGACAGACAGAC	G	4021.81	PASS	AB=1.000;AC=22;AF=0.440;AN=50;BaseQRankSum=1.363;DP=617;FS=21.028;HRun=0;HaplotypeScore=183.0597;InbreedingCoeff=0.5097;MQ=38.05;MQ0=36;MQRankSum=-2.111;QD=12.57;ReadPosRankSum=-0.023;VQSLOD=1.4262;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:32:12.85:74,0,13	0/0:18,0:16:27.96:0,28,908	0/0:16,0:2:2.92:0,3,17	0/0:22,0:3:9.03:0,9,180	0/0:20,0:19:9.03:0,9,235	0/0:18,0:17:25.15:0,25,789	0/1:31,0:27:18.74:19,0,353	1/1:28,0:18:54.18:964,54,0	0/0:29,0:27:0.46:0,0,968	0/0:16,0:15:45.11:0,45,1532	0/0:20,0:18:23.57:0,24,760	./.	0/1:43,0:39:17.61:18,0,1082	0/0:25,0:25:23.47:0,23,826	1/1:33,0:32:1.41:3,1,0	0/0:24,0:22:20.22:0,20,261	0/0:21,0:19:33.18:0,33,684	0/1:22,0:22:18.01:18,0,1474	1/1:5,13:16:47.87:715,48,0	./.	1/1:26,0:22:14.80:373,15,0	0/0:22,0:20:12.02:0,12,210	./.	1/1:24,0:22:6.02:65,6,0	1/1:19,1:20:9.01:195,9,0	1/1:17,1:16:42.05:958,42,0	1/1:12,3:15:22.32:560,22,0	1/1:8,0:6:3.01:61,3,0
chr10	39650685	.	GACAGACAGACACACACACAC	G	934.62	PASS	AB=1.000;AC=12;AF=0.240;AN=50;BaseQRankSum=5.385;DP=639;FS=11.820;HRun=0;HaplotypeScore=231.4431;InbreedingCoeff=0.0857;MQ=36.98;MQ0=38;MQRankSum=-4.307;QD=4.15;ReadPosRankSum=0.582;VQSLOD=1.4042;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:29:11.68:73,0,12	0/0:19,0:17:27.35:0,27,1087	0/0:22,0:5:15.03:0,15,300	0/0:37,0:9:25.33:0,25,676	0/0:19,0:18:8.98:0,9,167	0/0:17,0:16:33.11:0,33,1089	0/0:32,0:28:37:0,37,775	0/1:34,0:25:99:237,0,217	0/0:27,0:25:57.07:0,57,2071	0/0:17,0:16:48.16:0,48,2066	0/0:18,0:16:21.07:0,21,885	./.	0/0:42,0:39:32.15:0,32,1749	0/0:27,0:27:23.57:0,24,1121	0/1:34,0:33:0.19:0,0,16	0/0:24,0:22:16.33:0,16,128	0/0:21,0:18:38.70:0,39,576	0/1:22,0:22:15.52:16,0,1841	0/1:19,0:17:99:157,0,105	./.	0/0:29,0:25:23.66:0,24,439	0/0:22,0:20:9.01:0,9,116	./.	1/1:23,0:21:6.02:113,6,0	0/1:18,0:18:7.44:19,0,7	0/1:22,0:20:99:271,0,187	0/1:15,0:13:47.01:112,0,47	1/1:8,0:6:3.01:78,3,0
chr10	39650687	.	CAG	C	299.17	PASS	AB=1.000;AC=10;AF=0.192;AN=52;BaseQRankSum=4.551;DP=647;FS=25.634;HRun=0;HaplotypeScore=141.8709;InbreedingCoeff=0.1356;MQ=36.71;MQ0=39;MQRankSum=-4.649;QD=1.61;ReadPosRankSum=1.142;VQSLOD=1.0924;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:28:15.04:53,0,15	0/0:19,0:17:27.76:0,28,401	0/0:26,0:6:8.72:0,9,49	0/0:39,1:9:20.90:0,21,268	0/0:19,0:18:9:0,9,111	0/0:18,0:17:27.82:0,28,410	0/0:32,0:28:34.90:0,35,419	0/1:39,0:29:99:168,0,137	0/0:27,0:25:59.30:0,59,533	0/0:17,0:16:48.12:0,48,707	0/0:18,0:16:21.07:0,21,383	./.	0/0:41,0:38:12.30:0,12,605	0/0:27,0:27:23.65:0,24,423	0/1:33,0:32:0:1,0,0	0/0:22,0:20:2.29:0,2,95	0/0:19,2:18:21.75:0,22,386	0/0:19,1:20:16.34:0,16,762	0/1:18,0:17:40.89:41,0,85	0/0:6,0:3:2.97:0,3,20	0/0:34,0:30:35.90:0,36,310	0/0:21,0:19:9.01:0,9,135	./.	1/1:23,0:21:5.92:42,6,0	0/0:17,1:18:2.11:0,2,13	0/1:23,0:21:65.25:65,0,154	0/1:15,0:13:13.16:51,0,13	1/1:6,0:4:0.89:2,1,0
chr10	39650693	.	GAC	G	2021.89	PASS	AB=0.925;AC=24;AF=0.500;AN=48;BaseQRankSum=1.258;DP=710;FS=11.613;HRun=0;HaplotypeScore=142.5722;InbreedingCoeff=0.4791;MQ=36.12;MQ0=52;MQRankSum=3.381;QD=5.44;ReadPosRankSum=1.200;VQSLOD=2.6740;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:29:4.96:9,0,5	0/0:18,0:16:18.03:0,18,271	0/0:46,0:9:19.18:0,19,202	0/0:61,1:13:35.68:0,36,407	0/0:14,0:12:2.97:0,3,20	1/1:14,4:17:17.91:187,18,0	1/1:31,5:31:14.67:172,15,0	1/1:35,10:35:12.41:379,12,0	0/1:23,6:27:17.81:310,0,18	0/1:18,2:19:15.34:15,0,374	0/0:19,0:17:18.06:0,18,275	./.	0/0:40,2:40:5.66:0,6,564	0/0:27,1:28:26.40:0,26,375	0/1:33,0:32:0:1,0,0	0/0:24,0:22:6.21:0,6,54	0/1:22,0:19:0.22:0,0,116	0/1:19,1:19:1.64:2,0,375	1/1:18,0:17:6.28:100,6,0	1/1:1,7:5:3.01:35,3,0	1/1:9,26:31:39.07:452,39,0	./.	./.	./.	1/1:10,9:19:3.01:35,3,0	1/1:8,16:22:23.65:382,24,0	1/1:10,5:13:12.10:107,12,0	0/0:6,0:4:2.37:0,2,8
chr10	39650698	.	A	AGT	73.48	PASS	AB=0.960;AC=5;AF=0.096;AN=52;BaseQRankSum=5.661;DP=756;FS=10.067;HRun=0;HaplotypeScore=163.6471;InbreedingCoeff=0.0621;MQ=36.14;MQ0=61;MQRankSum=-3.347;QD=0.74;ReadPosRankSum=-1.017;VQSLOD=1.9844;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:31:18.04:0,18,229	0/0:19,0:17:20.86:0,21,339	0/0:56,0:9:23.71:0,24,318	0/0:78,0:13:36.59:0,37,558	0/0:12,0:10:3.01:0,3,42	0/0:19,0:17:32.91:0,33,378	0/0:40,0:36:47.72:0,48,529	0/0:45,0:35:92.99:0,93,971	0/0:31,0:29:74.43:0,74,822	0/0:22,0:21:60.13:0,60,851	0/0:17,0:16:24.04:0,24,385	./.	0/0:45,0:42:60.15:0,60,796	0/0:32,0:31:30.02:0,30,466	1/1:37,1:37:2.45:24,2,0	0/1:23,2:23:59.92:60,0,66	0/1:20,1:18:74.90:75,0,145	0/0:22,0:20:39.95:0,40,680	0/0:18,0:18:37.49:0,37,392	0/0:8,0:5:2.56:0,3,20	0/0:36,0:32:41.86:0,42,345	0/0:16,0:14:2.57:0,3,21	./.	0/0:24,0:23:1.47:0,1,39	0/0:21,0:21:0.78:0,1,41	0/0:26,0:24:25.37:0,25,385	0/1:15,0:13:22.27:22,0,87	0/0:6,0:4:3:0,3,25
chr10	39650704	.	A	AGT	239.52	PASS	AB=0.955;AC=8;AF=0.154;AN=52;BaseQRankSum=5.168;DP=774;FS=0.000;HRun=0;HaplotypeScore=155.0374;InbreedingCoeff=0.0841;MQ=35.98;MQ0=67;MQRankSum=-2.873;QD=1.45;ReadPosRankSum=-2.865;VQSLOD=1.6573;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,3:26:9:0,9,94	0/0:19,0:17:23.87:0,24,385	0/0:72,0:11:33.08:0,33,469	0/0:92,0:16:44.97:0,45,643	0/0:11,0:9:3:0,3,25	0/0:16,0:14:26.89:0,27,289	0/0:39,0:35:51.45:0,51,557	0/0:41,0:31:80.84:0,81,841	0/0:30,0:28:75:0,75,896	0/0:21,0:20:56.87:0,57,805	0/0:18,0:17:21.03:0,21,338	./.	0/1:40,5:42:99:208,0,596	0/1:27,5:33:52.58:53,0,359	0/0:38,0:37:2.89:0,3,20	0/1:24,0:22:23.55:40,0,24	0/1:20,0:17:34.08:34,0,88	0/0:22,0:20:46.02:0,46,786	0/0:17,0:17:42.80:0,43,467	0/0:9,0:6:5.55:0,6,45	0/0:42,0:37:54.37:0,54,521	0/1:15,0:13:0:0,0,0	./.	1/1:21,0:20:2.96:19,3,0	0/0:20,0:20:8.63:0,9,115	0/0:27,0:25:51.73:0,52,477	0/0:16,0:14:9.86:0,10,121	0/1:6,0:4:4.07:4,0,18
chr10	39652173	.	TC	T	12063.59	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=16.759;DP=739;FS=4.005;HRun=2;HaplotypeScore=91.0069;InbreedingCoeff=0.9948;MQ=84.03;MQ0=0;MQRankSum=-2.995;QD=34.57;ReadPosRankSum=2.031;VQSLOD=5.2562;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,153,2249	0/0:13,0:13:39.10:0,39,561	0/0:16,0:16:48.12:0,48,650	0/0:27,0:27:72.19:0,72,952	0/0:27,0:27:78.23:0,78,1113	1/1:0,25:25:72.23:935,72,0	1/1:0,24:24:63.20:818,63,0	1/1:3,25:28:69.21:881,69,0	1/1:0,25:25:69.22:891,69,0	0/0:25,0:25:72.24:0,72,1061	0/0:19,0:19:57.18:0,57,833	1/1:0,28:28:81.26:1052,81,0	0/0:33,0:33:99:0,99,1480	0/0:31,0:31:93.31:0,93,1390	0/0:35,0:35:99:0,99,1463	0/0:31,0:31:90.30:0,90,1349	0/0:42,0:42:99:0,126,1803	0/0:16,0:16:48.15:0,48,699	1/1:1,17:18:51.15:646,51,0	1/1:0,14:14:39.13:506,39,0	1/1:0,63:63:99:2220,172,0	0/0:24,0:24:60.19:0,60,876	1/1:1,13:14:36.12:462,36,0	1/1:2,31:33:87.28:1130,87,0	1/1:0,15:15:42.14:545,42,0	1/1:1,18:19:12.20:654,12,0	1/1:1,32:33:84.27:1091,84,0	1/1:0,10:10:18.06:234,18,0
chr10	39654173	.	AT	A	2977.01	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=7.744;DP=609;FS=1.246;HRun=8;HaplotypeScore=63.5557;InbreedingCoeff=0.9619;MQ=80.28;MQ0=0;MQRankSum=-1.134;QD=22.73;ReadPosRankSum=3.075;VQSLOD=4.3551;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,1:31:55.27:0,55,939	0/0:12,0:12:36.11:0,36,435	0/0:21,1:22:23.09:0,23,482	0/0:14,0:14:29.12:0,29,263	1/1:1,28:29:75.12:724,75,0	0/0:17,0:17:51.16:0,51,616	0/0:15,0:15:42.09:0,42,491	0/0:31,0:31:78.23:0,78,932	0/0:14,0:14:39.11:0,39,460	0/0:20,0:20:57.17:0,57,688	0/0:29,0:29:75.21:0,75,885	0/0:19,0:19:51.13:0,51,602	0/0:26,0:26:69.21:0,69,834	0/0:17,0:17:45.14:0,45,543	1/1:2,22:24:60.09:579,60,0	1/1:3,17:20:14.84:427,15,0	1/1:2,31:33:81.13:782,81,0	0/0:23,0:23:69.21:0,69,832	0/0:11,1:12:4.12:0,4,333	0/0:21,0:21:60.17:0,60,713	0/0:11,0:11:27.07:0,27,314	1/1:2,23:25:66.10:637,66,0	0/0:20,0:20:60.14:0,60,705	0/0:25,0:25:69.21:0,69,833	0/0:24,0:24:69.21:0,69,834	0/0:25,0:25:69.19:0,69,810	0/0:28,0:28:81.21:0,81,943	0/0:22,0:22:48.15:0,48,580
chr10	39654785	.	G	GGT	1599.82	PASS	AB=0.791;AC=21;AF=0.438;AN=48;BaseQRankSum=1.551;DP=715;FS=0.837;HRun=0;HaplotypeScore=132.9860;InbreedingCoeff=-0.0485;MQ=59.85;MQ0=21;MQRankSum=-0.346;QD=3.72;ReadPosRankSum=0.256;VQSLOD=2.5015;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:33,0:34:8.96:72,9,0	0/0:11,0:11:24.01:0,24,228	./.	./.	1/1:16,0:20:4.65:40,5,0	0/0:12,0:18:2.84:0,3,14	./.	./.	0/0:9,0:22:5.68:0,6,28	0/0:24,0:24:11.60:0,12,121	0/0:9,0:10:8.85:0,9,72	0/1:22,2:34:11.05:182,0,11	0/0:22,0:22:6.01:0,6,64	0/0:23,0:27:8.85:0,9,78	1/1:17,0:26:15.01:139,15,0	1/1:19,1:28:20.07:208,20,0	0/1:16,0:24:21.51:40,0,22	0/1:15,0:15:12.21:12,0,50	0/0:35,0:34:8.81:0,9,77	0/1:11,7:19:31.30:118,0,31	0/1:42,5:44:53.40:56,0,53	1/1:16,8:26:8.60:100,9,0	0/1:16,7:24:14.36:101,0,14	0/1:34,1:48:16.89:250,0,17	0/1:15,8:23:44.35:75,0,44	0/1:21,0:21:16.23:98,0,16	0/1:12,9:21:72.09:171,0,72	0/1:7,7:14:60.39:98,0,60
chr10	39655484	.	ATCTTAG	A	6566.64	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=4.036;DP=749;FS=9.174;HRun=0;HaplotypeScore=193.1330;InbreedingCoeff=0.9978;MQ=84.52;MQ0=0;MQRankSum=-15.517;QD=54.27;ReadPosRankSum=1.959;VQSLOD=4.1797;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,154,4161	0/0:12,0:12:36.12:0,36,1280	0/0:28,0:28:72.21:0,72,2219	0/0:25,0:25:72.24:0,72,2272	0/0:17,0:17:51.16:0,51,1573	0/0:22,0:22:66.21:0,66,2178	0/0:32,0:32:93.32:0,93,3313	0/0:33,0:33:93.27:0,93,2401	0/0:17,0:17:51.18:0,51,1702	0/0:20,0:20:57.19:0,57,1953	0/0:19,0:19:57.18:0,57,1920	1/1:2,17:19:48.16:1134,48,0	1/1:2,28:30:72.25:1701,72,0	1/1:0,34:34:96.33:2265,96,0	0/0:41,0:41:99:0,120,4260	0/0:42,0:42:99:0,126,4347	0/0:43,0:43:99:0,123,4367	0/0:24,0:24:69.24:0,69,2454	0/0:22,0:22:57.20:0,57,1543	0/0:24,0:24:72.25:0,72,1942	0/0:43,0:43:99:0,123,3397	0/0:24,0:24:66.23:0,66,2350	1/1:1,18:19:41.83:834,42,0	1/1:0,19:19:27.08:633,27,0	0/0:25,0:25:75.25:0,75,1970	0/0:22,0:22:63.21:0,63,1671	0/0:35,0:35:99:0,105,2832	0/0:6,0:6:18.06:0,18,499
chr10	39657316	.	CGTGT	C	11204.40	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=3.204;DP=762;FS=5.445;HRun=0;HaplotypeScore=168.1415;InbreedingCoeff=0.9635;MQ=61.55;MQ0=3;MQRankSum=3.501;QD=28.80;ReadPosRankSum=5.973;VQSLOD=3.9727;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:16,30:46:72.12:1198,72,0	0/0:15,0:15:21.07:0,21,516	0/0:43,0:23:36.96:0,37,739	0/0:42,0:22:5.80:0,6,508	0/0:11,0:19:4.08:0,4,124	0/0:19,0:19:39.12:0,39,908	0/0:24,0:27:62.66:0,63,1308	1/1:16,15:31:35.48:733,35,0	0/0:23,0:23:54.19:0,54,1274	0/0:28,0:28:56.92:0,57,1268	0/0:11,0:11:24.08:0,24,559	1/1:4,14:20:42.12:655,42,0	1/1:10,22:34:65.97:1054,66,0	1/1:4,15:20:48.16:777,48,0	0/0:14,0:32:51.06:0,51,839	0/0:12,0:33:60.08:0,60,1050	0/0:14,0:28:33.04:0,33,533	0/0:27,0:28:71.93:0,72,1598	1/1:12,8:20:23.20:398,23,0	1/1:5,13:19:33.11:527,33,0	1/1:23,34:57:87.30:1448,87,0	0/0:14,0:25:33.50:0,33,575	1/1:3,14:17:26.71:446,27,0	1/1:7,21:30:57.19:927,57,0	1/1:7,15:22:36.12:599,36,0	1/1:9,19:28:51.17:848,51,0	1/1:6,23:29:57.19:947,57,0	1/1:3,13:16:37.42:646,37,0
chr10	39659319	.	GCCCTTGCCT	G	11007.89	PASS	AB=0.564;AC=27;AF=0.482;AN=56;BaseQRankSum=12.468;DP=541;FS=18.322;HRun=0;HaplotypeScore=253.5613;InbreedingCoeff=0.8769;MQ=73.15;MQ0=0;MQRankSum=-11.569;QD=44.03;ReadPosRankSum=6.442;VQSLOD=2.8275;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,22:25:6.02:172,6,0	0/0:15,0:15:45.15:0,45,2064	0/0:20,0:19:57.20:0,57,2352	0/0:24,0:24:63.21:0,63,2546	0/0:19,0:19:48.16:0,48,1566	0/0:24,0:24:51.18:0,51,2043	0/0:23,0:23:48.16:0,48,2001	1/1:5,14:19:42.14:1136,42,0	0/0:30,0:30:60.19:0,60,2012	0/0:19,0:19:57.20:0,57,2718	0/0:8,0:8:24.08:0,24,1172	1/1:3,26:29:42.14:1285,42,0	1/1:2,16:18:39.13:1208,39,0	1/1:3,12:15:27.09:830,27,0	0/0:24,0:24:45.12:0,45,1783	0/0:18,0:18:45.15:0,45,1784	0/0:27,0:27:54.19:0,54,2278	0/0:27,0:27:81.28:0,81,3851	1/1:3,12:15:38.16:1069,38,0	1/1:1,17:18:30.06:857,30,0	1/1:5,21:26:2.69:56,3,0	0/0:12,0:12:24.08:0,24,783	1/1:1,8:9:21.07:603,21,0	1/1:2,12:14:9.03:278,9,0	1/1:2,13:15:15.05:405,15,0	0/1:5,17:22:93.04:1527,0,93	1/1:1,14:15:27.09:837,27,0	1/1:0,10:10:23.94:744,24,0
chr10	39659335	.	TGTGTGCGTGCGTGCGC	T	19413.57	PASS	AB=0.621;AC=43;AF=0.768;AN=56;BaseQRankSum=11.627;DP=508;FS=5.729;HRun=0;HaplotypeScore=266.4724;InbreedingCoeff=0.8077;MQ=70.42;MQ0=1;MQRankSum=-12.131;QD=51.91;ReadPosRankSum=4.760;VQSLOD=3.7579;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:20,2:22:6.02:255,6,0	0/0:15,0:15:36.09:0,36,1937	0/0:28,0:19:13.50:0,14,650	0/0:34,0:29:27.99:0,28,926	1/1:3,13:16:33.11:1429,33,0	1/1:6,18:24:30.10:1322,30,0	1/1:8,10:18:12.04:538,12,0	1/1:11,0:11:14.92:142,15,0	1/1:6,23:29:42.14:1882,42,0	0/0:20,0:20:45.12:0,45,2423	0/0:8,0:8:24.08:0,24,1838	1/1:15,11:26:36.12:1613,36,0	1/1:6,11:17:32.78:1477,33,0	1/1:4,9:13:27.09:1202,27,0	1/1:4,15:19:18.06:807,18,0	1/1:6,11:17:18.06:807,18,0	1/1:11,17:28:14.99:659,15,0	0/0:29,0:29:75.24:0,75,5090	1/1:9,3:12:27.04:607,27,0	1/1:9,8:17:27.09:1210,27,0	1/1:22,1:23:3.01:98,3,0	1/1:3,6:9:12.04:537,12,0	1/1:0,7:7:21.07:893,21,0	1/1:12,3:15:9.03:390,9,0	1/1:6,5:11:15.05:612,15,0	0/1:7,11:18:46.29:1567,0,46	1/1:7,5:12:27.09:830,27,0	1/1:6,4:10:12.04:538,12,0
chr10	39662890	.	CCT	C	451	PASS	AB=0.986;AC=11;AF=0.212;AN=52;BaseQRankSum=-1.659;DP=624;FS=17.750;HRun=0;HaplotypeScore=99.1144;InbreedingCoeff=0.4073;MQ=71.17;MQ0=12;MQRankSum=2.133;QD=3.05;ReadPosRankSum=3.119;VQSLOD=0.9895;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:28:14.20:70,14,0	0/0:12,0:13:9.01:0,9,88	./.	./.	0/0:14,0:15:0:0,0,0	1/1:8,6:15:14.61:123,15,0	1/1:12,6:19:18.18:158,18,0	0/0:42,0:42:10.80:0,11,111	1/1:15,6:22:14.30:176,14,0	0/0:32,0:32:32.89:0,33,324	0/0:15,0:19:9:0,9,78	0/0:14,0:22:6:0,6,52	0/0:17,0:24:2.46:0,2,25	0/0:14,0:21:5.88:0,6,45	0/0:21,0:22:6.50:0,6,54	0/0:11,0:11:5.98:0,6,48	0/0:26,0:26:9:0,9,78	0/0:18,0:25:23.72:0,24,198	0/1:16,0:16:37.94:38,0,76	0/0:18,0:18:20.74:0,21,138	0/0:24,0:24:8.94:0,9,75	0/0:19,0:23:6:0,6,52	0/0:9,0:10:3:0,3,26	0/0:15,0:17:0.10:0,0,129	0/0:16,0:15:8.37:0,8,64	0/1:23,0:23:30.54:31,0,120	0/0:17,0:16:11.86:0,12,79	0/1:21,1:23:8.58:9,0,148
chr10	39662933	.	C	CTCTG	3194.13	PASS	AB=0.848;AC=31;AF=0.554;AN=56;BaseQRankSum=-1.751;DP=600;FS=2.540;HRun=0;HaplotypeScore=116.6464;InbreedingCoeff=0.1529;MQ=66.85;MQ0=16;MQRankSum=-0.249;QD=7.62;ReadPosRankSum=1.864;VQSLOD=2.1715;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:33,0:31:12.50:324,13,0	0/1:6,0:6:9.05:35,0,9	0/0:35,0:13:16.33:0,16,167	0/0:40,0:17:1.44:0,1,140	1/1:17,0:16:35.59:283,36,0	0/0:26,0:26:61.51:0,62,547	0/0:19,0:18:48:0,48,450	1/1:27,0:27:65.86:558,66,0	0/0:22,0:22:54.02:0,54,553	0/0:21,0:21:20.07:0,20,281	0/1:18,0:18:78.80:79,0,143	0/1:20,0:20:38.28:38,0,167	0/1:22,0:22:17.52:18,0,220	0/1:21,0:21:87.28:87,0,160	1/1:18,0:18:18.43:189,18,0	1/1:4,1:23:2.80:62,3,0	1/1:3,0:27:10.26:187,10,0	0/1:23,0:22:42.99:43,0,150	1/1:17,0:17:22.69:296,23,0	1/1:1,0:17:20.92:168,21,0	0/1:2,0:18:14.62:49,0,15	1/1:18,0:18:33.13:319,33,0	0/1:9,0:9:18.36:18,0,148	0/0:18,0:18:4.64:0,5,152	0/1:4,0:20:14.81:15,0,16	0/1:8,0:29:14.93:414,0,15	1/1:1,0:21:11.99:101,12,0	0/1:6,0:12:2.66:97,0,3
chr10	39665481	.	A	AC	3582	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-9.476;DP=457;FS=0.484;HRun=8;HaplotypeScore=50.1143;InbreedingCoeff=0.9281;MQ=81.62;MQ0=0;MQRankSum=0.168;QD=23.88;ReadPosRankSum=-1.039;VQSLOD=3.7704;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:69.02:0,69,631	0/0:4,0:4:12.01:0,12,110	0/0:11,0:11:9.59:0,10,126	0/0:19,0:19:22.04:0,22,168	0/0:11,0:11:30.01:0,30,274	0/0:1,0:11:18.33:0,18,54	0/0:3,0:19:26.48:0,26,78	1/1:6,19:25:2.22:520,2,0	0/0:0,0:8:16.30:0,16,48	0/0:11,0:11:27.01:0,27,247	0/0:12,0:12:33.01:0,33,301	0/0:14,0:14:30.01:0,30,274	0/0:17,0:17:45.02:0,45,412	0/0:10,0:10:27.01:0,27,246	0/0:10,0:10:30.02:0,30,275	0/0:9,0:9:27.01:0,27,247	0/0:25,0:25:65.99:0,66,592	0/0:39,0:39:99:0,99,898	1/1:7,8:15:24.06:263,24,0	1/1:0,17:17:48.14:554,48,0	1/1:8,19:27:54.16:623,54,0	0/0:15,0:15:38.96:0,39,346	0/0:13,0:13:33.01:0,33,302	0/0:21,0:21:42.01:0,42,384	1/1:2,17:19:45.13:519,45,0	1/1:3,14:17:42.10:472,42,0	1/1:5,11:16:27.08:312,27,0	1/1:4,10:14:5.63:319,6,0
chr10	39665978	.	GAAA	G	4241.95	PASS	AB=0.613;AC=15;AF=0.268;AN=56;BaseQRankSum=-0.310;DP=630;FS=2.845;HRun=12;HaplotypeScore=147.0429;InbreedingCoeff=0.9031;MQ=80.48;MQ0=1;MQRankSum=-5.630;QD=28.66;ReadPosRankSum=1.915;VQSLOD=3.0107;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:38:29.88:0,30,136	0/0:9,0:9:24.08:0,24,465	0/0:47,0:38:59.44:0,59,682	0/0:20,1:20:15.19:0,15,222	0/0:17,0:31:78.25:0,78,1204	0/0:16,0:22:54.16:0,54,953	0/0:16,0:19:48.16:0,48,915	1/1:10,20:30:72.18:899,72,0	0/0:17,0:19:54.15:0,54,965	0/0:30,0:34:78.25:0,78,1384	0/0:16,0:16:39.13:0,39,717	0/0:8,0:22:47.84:0,48,373	0/0:7,0:22:53.82:0,54,421	0/0:9,0:26:61.68:0,62,494	0/0:11,0:28:84.24:0,84,1265	0/0:8,0:20:54.13:0,54,770	0/0:11,0:24:63.21:0,63,961	0/0:25,0:26:69.17:0,69,1248	1/1:5,19:24:54.10:681,54,0	1/1:3,13:17:45.08:550,45,0	1/1:4,10:15:18.57:232,19,0	0/0:12,0:21:42.14:0,42,647	0/0:4,0:16:44.88:0,45,392	0/0:6,0:18:53.86:0,54,432	1/1:1,11:12:33.09:417,33,0	0/1:7,12:19:73.14:443,0,73	1/1:3,20:23:63.17:796,63,0	1/1:2,6:8:18.03:225,18,0
chr10	39666012	.	T	TG	12433.59	PASS	AB=0.577;AC=37;AF=0.661;AN=56;BaseQRankSum=6.471;DP=572;FS=9.004;HRun=2;HaplotypeScore=93.6237;InbreedingCoeff=0.9189;MQ=81.07;MQ0=0;MQRankSum=-6.971;QD=31.72;ReadPosRankSum=1.547;VQSLOD=4.0022;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:36,0:36:89.91:785,90,0	0/0:12,0:12:30.09:0,30,372	0/0:25,0:24:61.35:0,61,717	0/0:20,0:19:48.03:0,48,544	1/1:21,0:21:50.87:428,51,0	0/0:15,0:15:42.13:0,42,521	0/0:21,0:21:63.20:0,63,780	1/1:4,23:27:69.23:992,69,0	0/0:28,0:28:81.25:0,81,996	0/0:25,0:25:72.23:0,72,890	0/0:11,0:11:30.09:0,30,372	1/1:3,20:23:63.16:864,63,0	1/1:3,20:23:66.22:946,66,0	1/1:1,26:27:81.23:1140,81,0	1/1:27,0:27:74.90:647,75,0	1/1:14,0:14:41.95:372,42,0	1/1:28,0:27:74.88:645,75,0	0/0:23,0:23:60.19:0,60,741	1/1:2,18:20:54.18:777,54,0	1/1:0,12:12:36.12:518,36,0	1/1:3,25:28:57.19:821,57,0	1/1:15,0:15:35.96:314,36,0	1/1:1,14:15:36.12:517,36,0	1/1:5,12:17:42.06:556,42,0	1/1:1,14:15:36.12:517,36,0	0/1:4,11:15:32.27:475,0,32	1/1:2,20:22:60.20:862,60,0	1/1:2,5:7:18.06:256,18,0
chr10	39666014	.	G	GA	10172.86	PASS	AB=1.000;AC=37;AF=0.661;AN=56;BaseQRankSum=10.218;DP=564;FS=4.562;HRun=0;HaplotypeScore=98.7550;InbreedingCoeff=0.8969;MQ=82.97;MQ0=0;MQRankSum=-6.405;QD=26.49;ReadPosRankSum=3.235;VQSLOD=5.5581;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,35:35:90.31:1425,90,0	0/0:11,0:11:32.47:0,32,427	0/0:26,0:25:62.82:0,63,844	0/0:20,0:20:51.07:0,51,640	1/1:2,19:21:57.13:847,57,0	0/0:15,0:15:42.14:0,42,587	0/0:22,0:22:54.17:0,54,869	1/1:25,0:25:17.63:363,18,0	0/0:29,0:29:84.26:0,84,1156	0/0:25,0:25:75.21:0,75,1024	0/0:11,0:11:30.10:0,30,419	1/1:23,0:23:56.05:387,56,0	1/1:24,0:24:65.15:465,65,0	1/1:27,0:27:76.99:556,77,0	1/1:0,27:27:75.26:1196,75,0	1/1:1,14:15:42.14:669,42,0	1/1:1,27:27:81.22:1241,81,0	0/0:21,0:21:63.17:0,63,858	1/1:20,0:20:5.61:322,6,0	1/1:12,0:12:35.49:250,35,0	1/1:26,0:26:33.88:326,34,0	1/1:1,14:15:36.12:574,36,0	1/1:14,0:14:35.62:275,36,0	1/1:16,0:16:12.63:228,13,0	1/1:14,0:14:35.63:264,36,0	0/1:15,0:15:66.10:218,0,66	1/1:20,0:20:59.49:443,59,0	1/1:7,0:7:17.76:120,18,0
chr10	39669348	.	CA	C	4458.27	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=12.796;DP=743;FS=0.000;HRun=5;HaplotypeScore=73.1976;InbreedingCoeff=0.9999;MQ=86.85;MQ0=0;MQRankSum=-0.570;QD=31.40;ReadPosRankSum=2.477;VQSLOD=5.4530;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,150,2048	1/1:0,11:11:33.09:374,33,0	0/0:21,0:21:48.03:0,48,576	0/0:31,0:31:84.16:0,84,1057	0/0:25,0:25:75.22:0,75,990	0/0:26,0:26:78.26:0,78,1067	0/0:30,0:30:90.29:0,90,1216	0/0:32,0:32:84.28:0,84,1148	0/0:35,0:35:99:0,99,1336	1/1:0,22:22:60.12:649,60,0	1/1:0,20:20:60.17:679,60,0	1/1:1,27:28:75.21:851,75,0	0/0:26,0:26:78.25:0,78,1047	0/0:32,0:32:84.26:0,84,1128	0/0:23,0:23:69.23:0,69,944	0/0:23,0:23:69.23:0,69,943	0/0:33,0:33:96.31:0,96,1296	1/1:1,14:15:42.12:476,42,0	0/0:18,0:18:48.16:0,48,656	0/0:29,0:29:75.25:0,75,1021	0/0:36,0:36:99:0,108,1424	0/0:21,0:21:63.21:0,63,861	1/1:1,23:24:63.18:714,63,0	1/1:1,21:22:63.18:715,63,0	0/0:24,0:24:69.23:0,69,940	0/0:27,0:27:78.25:0,78,1054	0/0:38,1:38:46.72:0,47,1389	0/0:19,0:19:57.19:0,57,779
chr10	39669845	.	G	GA	1680.50	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-7.821;DP=610;FS=14.523;HRun=2;HaplotypeScore=59.4314;InbreedingCoeff=0.9838;MQ=79.94;MQ0=0;MQRankSum=-1.031;QD=35.76;ReadPosRankSum=4.106;VQSLOD=2.6760;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,129,1551	0/0:14,0:14:36.09:0,36,419	0/0:17,0:17:51.07:0,51,589	0/0:14,0:14:32.84:0,33,316	0/0:17,0:17:51.14:0,51,613	0/0:17,0:17:48.12:0,48,567	0/0:31,0:31:84.20:0,84,986	0/0:26,0:26:78.05:0,78,902	0/0:17,0:17:48.12:0,48,568	0/0:30,0:30:87.14:0,87,1029	0/0:17,0:17:51.11:0,51,592	0/0:30,0:30:84.26:0,84,1039	1/1:0,25:25:66.22:943,66,0	1/1:2,20:22:60.20:859,60,0	0/0:14,0:14:36.11:0,36,435	0/0:26,0:26:69.22:0,69,854	0/0:33,0:33:96.19:0,96,1097	0/0:27,0:27:81.25:0,81,1001	0/0:22,0:22:66.02:0,66,779	0/0:18,0:18:50.35:0,50,576	0/0:37,0:37:99:0,105,1298	0/0:21,0:21:60.14:0,60,724	0/0:11,0:11:33.10:0,33,406	0/0:27,0:27:78.20:0,78,928	0/0:11,0:11:33.10:0,33,408	0/0:22,0:22:66.17:0,66,774	0/0:15,0:15:45.13:0,45,543	0/0:4,0:4:12.04:0,12,148
chr10	39671295	.	GA	G	4915.64	PASS	AB=0.892;AC=22;AF=0.393;AN=56;BaseQRankSum=-0.556;DP=658;FS=0.000;HRun=10;HaplotypeScore=90.8363;InbreedingCoeff=0.8443;MQ=73.72;MQ0=1;MQRankSum=1.083;QD=17.68;ReadPosRankSum=4.787;VQSLOD=5.1069;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:27:54.65:0,55,297	0/0:9,0:10:29.85:0,30,289	0/1:19,3:20:61.58:62,0,76	0/0:16,0:14:18.02:0,18,179	1/1:5,15:20:10.98:311,11,0	1/1:4,27:31:71.95:624,72,0	1/1:2,14:16:35.99:312,36,0	0/0:7,0:25:55.20:0,55,323	1/1:0,21:21:53.99:467,54,0	0/0:34,0:35:58.03:0,58,835	0/0:19,0:19:51.14:0,51,559	0/0:22,0:22:57.15:0,57,630	1/1:4,16:20:41.99:365,42,0	1/1:2,24:26:68.98:599,69,0	1/1:4,21:25:53.98:469,54,0	1/1:3,24:27:65.97:573,66,0	1/1:1,27:28:77.98:677,78,0	0/0:26,0:26:44.81:0,45,522	0/0:4,1:24:16.88:0,17,218	0/0:6,0:26:48.53:0,49,251	0/1:2,2:19:14.65:15,0,131	1/1:1,22:23:50.98:442,51,0	0/0:24,0:24:60.11:0,60,647	0/0:31,0:31:84.01:0,84,911	0/0:6,0:21:55.05:0,55,308	0/0:7,0:27:57.27:0,57,318	0/0:9,0:32:62.83:0,63,350	0/0:4,0:15:38.64:0,39,218
chr10	39672435	.	T	TA	1251.91	PASS	AB=0.921;AC=23;AF=0.411;AN=56;BaseQRankSum=12.890;DP=800;FS=18.592;HRun=0;HaplotypeScore=358.8312;InbreedingCoeff=-0.6088;MQ=50.27;MQ0=5;MQRankSum=-12.527;QD=1.95;ReadPosRankSum=-7.175;VQSLOD=0.2973;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:35,2:38:0.99:0,1,466	0/1:10,0:11:38.37:38,0,151	0/0:37,0:29:80.75:0,81,1080	0/0:31,0:29:86.48:0,86,1138	0/1:18,0:18:4.71:5,0,32	0/1:18,2:22:47.57:94,0,48	0/1:30,0:41:99:109,0,461	0/1:40,0:41:37.34:37,0,788	0/1:27,3:32:82.14:82,0,155	0/1:36,2:37:96.38:96,0,661	1/1:14,4:17:2.90:16,3,0	0/1:35,4:39:65.39:65,0,363	0/1:29,5:34:99:106,0,308	0/1:23,2:24:21.77:22,0,193	0/1:34,5:40:34.05:34,0,207	0/1:30,3:33:72.22:72,0,198	0/1:19,2:21:22.06:22,0,435	0/1:29,2:30:22.48:22,0,692	0/1:17,2:19:54.96:55,0,462	0/0:13,1:14:9.84:0,10,312	0/0:26,1:27:13.77:0,14,345	0/1:23,5:29:75.61:76,0,153	0/0:9,1:8:4.26:0,4,45	0/1:27,6:32:18.08:18,0,258	0/1:33,4:38:99:126,0,165	0/1:35,5:42:99:277,0,724	0/1:24,3:27:17.98:18,0,274	0/1:6,0:6:14.82:15,0,38
chr10	39673357	.	AG	A	15283.11	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=3.984;DP=559;FS=4.801;HRun=3;HaplotypeScore=120.3938;InbreedingCoeff=0.9825;MQ=80.89;MQ0=12;MQRankSum=-8.099;QD=33.96;ReadPosRankSum=6.905;VQSLOD=3.6493;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:0,24:24:66.21:818,66,0	1/1:1,12:13:36.11:446,36,0	0/0:36,1:29:29.31:0,29,896	0/0:64,2:29:46.51:0,47,702	1/1:0,19:19:48.10:594,48,0	1/1:0,14:14:39.12:483,39,0	1/1:0,19:19:51.16:630,51,0	1/1:1,18:19:54.15:647,54,0	1/1:1,9:10:24.07:297,24,0	1/1:0,21:20:60.16:718,60,0	1/1:1,17:18:48.15:595,48,0	1/1:0,18:18:51.16:631,51,0	1/1:1,13:14:39.12:483,39,0	1/1:0,11:11:33.10:409,33,0	1/1:0,21:21:60.19:743,60,0	1/1:1,18:19:51.16:632,51,0	1/1:2,17:18:42.13:520,42,0	1/1:1,15:16:42.13:520,42,0	1/1:0,16:16:48.12:580,48,0	1/1:0,15:15:39.12:484,39,0	1/1:0,13:13:33.10:409,33,0	1/1:0,24:24:72.23:889,72,0	1/1:0,27:27:78.23:966,78,0	1/1:1,14:15:36.11:446,36,0	1/1:0,20:20:57.18:707,57,0	1/1:0,16:16:48.15:595,48,0	1/1:1,24:25:72.23:892,72,0	1/1:0,4:4:12.04:149,12,0
chr10	39674703	.	G	GC	4874.13	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-12.132;DP=678;FS=3.281;HRun=2;HaplotypeScore=67.5796;InbreedingCoeff=0.9937;MQ=84.42;MQ0=0;MQRankSum=-1.760;QD=38.38;ReadPosRankSum=3.741;VQSLOD=5.5300;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,126,1545	0/0:5,0:5:15.05:0,15,186	0/0:20,0:20:50.33:0,50,574	0/0:23,0:23:60.18:0,60,734	0/0:10,0:10:24.05:0,24,283	1/1:1,25:26:72.24:1031,72,0	1/1:3,31:34:84.28:1208,84,0	0/0:31,0:31:93.26:0,93,1113	1/1:1,22:23:63.21:907,63,0	0/0:22,0:22:63.18:0,63,761	0/0:17,0:17:51.13:0,51,606	0/0:35,0:35:96.30:0,96,1187	1/1:0,25:25:72.24:1037,72,0	1/1:1,18:19:48.16:691,48,0	0/0:31,0:31:90.27:0,90,1103	0/0:21,0:21:63.20:0,63,781	0/0:36,0:36:99:0,108,1324	0/0:35,0:35:99:0,99,1227	0/0:6,0:6:18.04:0,18,209	0/0:20,0:20:54.14:0,54,644	0/0:52,0:52:99:0,138,1694	0/0:17,0:17:48.12:0,48,568	0/0:19,0:19:54.17:0,54,669	0/0:29,0:29:84.23:0,84,1024	0/0:22,0:22:60.14:0,60,715	0/0:30,0:30:84.26:0,84,1040	0/0:15,0:15:45.14:0,45,558	0/0:9,0:9:27.08:0,27,334
chr10	39675282	.	TTATATTATATATTA	T	4216.12	PASS	AB=1.000;AC=37;AF=0.712;AN=52;BaseQRankSum=-7.316;DP=291;FS=6.699;HRun=0;HaplotypeScore=120.4920;InbreedingCoeff=0.1037;MQ=75.62;MQ0=2;MQRankSum=-1.149;QD=18.02;ReadPosRankSum=-0.107;VQSLOD=3.2005;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:18.04:0,18,278	1/1:3,0:3:3:25,3,0	./.	0/0:16,0:9:6.81:0,7,47	1/1:8,0:9:17.77:216,18,0	0/1:22,0:22:99:274,0,216	1/1:4,0:4:3.01:51,3,0	1/1:44,0:44:86.45:1160,86,0	0/1:10,0:10:58.48:58,0,138	1/1:3,4:7:9.03:201,9,0	0/0:3,4:7:0:0,0,0	1/1:2,0:2:3.01:49,3,0	0/0:7,0:7:9.03:0,9,105	0/1:9,0:9:14.97:15,0,58	1/1:6,0:6:3.01:48,3,0	1/1:8,0:8:6.91:101,7,0	1/1:16,0:16:36.07:468,36,0	1/1:13,0:13:23.95:381,24,0	0/1:7,0:7:22.41:114,0,22	1/1:12,0:11:9:96,9,0	0/1:12,0:12:21.22:105,0,21	./.	1/1:4,0:4:5.99:48,6,0	1/1:4,0:4:6:71,6,0	1/1:10,0:10:8.98:72,9,0	1/1:5,0:5:9.01:103,9,0	0/1:7,0:7:40.83:105,0,41	0/1:19,0:19:42.30:455,0,42
chr10	39675336	.	G	GTA	1915.65	PASS	AB=0.841;AC=13;AF=0.283;AN=46;BaseQRankSum=-2.843;DP=242;FS=2.511;HRun=0;HaplotypeScore=67.3138;InbreedingCoeff=0.3740;MQ=78.64;MQ0=16;MQRankSum=-1.936;QD=16.80;ReadPosRankSum=-2.651;VQSLOD=2.5847;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:13,0:13:6.49:6,0,119	0/0:2,0:2:6.02:0,6,87	0/0:12,0:8:3.01:0,3,40	0/1:18,0:14:25.28:25,0,27	0/0:4,0:3:3.01:0,3,44	0/0:23,0:23:42.09:0,42,596	./.	1/1:13,33:36:7.81:1461,8,0	0/0:6,0:6:14.34:0,14,219	0/0:5,0:4:9.03:0,9,133	0/0:6,0:5:6.02:0,6,88	0/0:6,0:6:8.84:0,9,132	0/0:4,0:4:6.02:0,6,88	0/0:3,0:3:6.02:0,6,88	0/0:8,0:6:18.06:0,18,264	0/0:3,0:3:9.03:0,9,133	0/0:18,0:17:24.49:0,24,432	0/0:14,0:13:29.28:0,29,401	0/1:3,3:6:23.92:190,0,24	1/1:4,3:5:3.01:56,3,0	./.	./.	./.	0/0:2,0:2:3.01:0,3,42	./.	1/1:0,1:1:3.01:56,3,0	1/1:2,1:3:6.02:112,6,0	1/1:4,12:14:11.23:150,11,0
chr10	39675483	.	ATAG	A	2120.70	PASS	AB=0.674;AC=27;AF=0.587;AN=46;BaseQRankSum=2.685;DP=194;FS=6.241;HRun=0;HaplotypeScore=35.7705;InbreedingCoeff=0.1030;MQ=61.55;MQ0=11;MQRankSum=-1.014;QD=13.68;ReadPosRankSum=-1.323;VQSLOD=1.9868;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:13:4.36:124,4,0	0/1:1,2:3:18.10:42,0,18	1/1:1,0:1:1.25:3,1,0	0/0:6,0:6:3.98:0,4,29	0/1:1,4:5:38.99:87,0,39	0/1:5,8:13:99:112,0,148	0/1:2,1:2:19.92:20,0,42	1/1:41,0:26:73.47:1162,73,0	1/1:0,4:4:3.01:48,3,0	0/1:3,1:3:39.17:39,0,66	./.	0/0:0,3:3:0:0,0,0	0/0:4,0:4:12.04:0,12,225	0/0:5,0:4:12.04:0,12,227	0/1:6,2:8:33.19:33,0,130	0/0:3,0:3:6:0,6,72	0/0:3,12:15:6.01:0,6,93	0/1:5,11:14:51.74:157,0,52	1/1:8,0:6:17.43:215,17,0	1/1:2,0:2:0.94:1,1,0	1/1:3,0:3:2.60:10,3,0	./.	./.	1/1:1,3:3:3.01:48,3,0	./.	1/1:6,0:5:11.60:105,12,0	./.	1/1:18,0:16:10.79:58,11,0
chr10	39675486	.	G	GTATA	3480.78	PASS	AB=0.875;AC=18;AF=0.375;AN=48;BaseQRankSum=-6.740;DP=205;FS=5.544;HRun=0;HaplotypeScore=38.5325;InbreedingCoeff=0.4871;MQ=61.19;MQ0=11;MQRankSum=-2.406;QD=26.98;ReadPosRankSum=-4.738;VQSLOD=1.5340;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,13:13:12.03:253,12,0	0/0:3,0:3:5.91:0,6,73	0/0:2,0:1:2.50:0,2,9	0/1:6,0:6:7.60:8,0,17	0/1:6,0:6:0.14:0,0,49	0/0:16,0:16:18.24:0,18,234	0/0:3,0:2:5.89:0,6,72	1/1:9,29:35:97.54:1942,98,0	0/0:4,0:4:2.79:0,3,17	0/0:4,0:3:8.94:0,9,119	1/1:1,0:1:3.01:40,3,0	0/0:3,0:3:0:0,0,0	0/0:4,0:4:12.04:0,12,232	0/0:4,0:4:12.04:0,12,217	0/0:8,0:8:14.94:0,15,230	0/0:3,0:3:6.02:0,6,99	0/0:15,0:15:6.02:0,6,97	0/1:16,0:14:29.50:29,0,138	1/1:1,7:7:21.07:469,21,0	0/1:0,2:3:0:1,0,0	1/1:0,3:3:3.01:82,3,0	./.	./.	0/0:3,0:3:2.92:0,3,17	./.	1/1:0,5:6:12.04:328,12,0	./.	1/1:0,18:16:12.04:329,12,0
chr10	39675559	.	GTAC	G	127.49	PASS	AB=0.899;AC=13;AF=0.271;AN=48;BaseQRankSum=3.352;DP=210;FS=3.016;HRun=0;HaplotypeScore=63.2737;InbreedingCoeff=0.0398;MQ=75.27;MQ0=3;MQRankSum=-0.285;QD=1.66;ReadPosRankSum=-0.351;VQSLOD=1.4873;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:12.04:0,12,254	0/0:3,0:3:3.01:0,3,69	0/1:8,0:6:0.85:1,0,43	0/1:20,0:16:1.24:1,0,101	0/0:6,0:6:5.95:0,6,119	0/0:11,1:12:2.58:0,3,44	1/1:1,0:1:3.01:41,3,0	0/0:52,0:41:89.69:0,90,1731	0/1:3,1:4:13.65:25,0,14	1/1:0,1:1:3.01:51,3,0	0/0:3,2:5:9.03:0,9,207	0/0:3,1:3:3.01:0,3,69	0/1:4,0:4:12.22:43,0,12	1/1:3,0:3:0.47:1,0,0	0/0:2,3:5:6.02:0,6,112	0/0:3,1:4:9:0,9,159	0/0:14,3:17:26.76:0,27,553	0/1:8,2:10:61.89:62,0,286	0/1:11,1:9:16.98:17,0,482	0/0:2,0:2:0:0,0,0	0/0:1,0:1:3.01:0,3,69	./.	./.	./.	0/0:2,1:3:3.01:0,3,71	0/0:5,0:5:12.04:0,12,274	./.	0/1:9,5:12:1.40:1,0,135
chr10	39675580	.	A	ATAG	688.22	PASS	AB=0.903;AC=10;AF=0.227;AN=44;BaseQRankSum=-2.843;DP=200;FS=6.413;HRun=0;HaplotypeScore=53.4505;InbreedingCoeff=0.2990;MQ=65.92;MQ0=11;MQRankSum=-3.649;QD=7.24;ReadPosRankSum=1.911;VQSLOD=1.3721;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:4:2.62:0,3,48	0/0:2,0:2:3.01:0,3,48	0/0:6,0:4:1.25:0,1,3	0/0:20,0:13:2.94:0,3,18	0/0:5,0:5:6.02:0,6,96	0/0:11,0:11:2:0,2,61	./.	0/1:58,4:31:99:168,0,448	0/0:2,0:2:6.02:0,6,88	0/0:1,0:1:3.01:0,3,47	0/0:5,0:5:6.02:0,6,89	0/0:3,0:2:3.01:0,3,48	0/0:3,0:3:6.02:0,6,89	0/0:3,0:3:0.47:0,0,1	0/0:5,0:5:6.02:0,6,96	0/0:4,0:4:9.03:0,9,137	0/0:16,0:16:21.07:0,21,337	0/0:9,0:9:14.05:0,14,173	1/1:9,2:7:15.05:292,15,0	./.	1/1:1,0:1:3.01:58,3,0	./.	./.	./.	1/1:2,1:3:3.01:65,3,0	1/1:4,1:4:9.03:181,9,0	./.	0/1:11,2:11:27.88:51,0,28
chr10	39675597	.	G	GTA	177.71	PASS	AB=0.897;AC=8;AF=0.222;AN=36;BaseQRankSum=3.841;DP=151;FS=11.262;HRun=0;HaplotypeScore=45.6807;InbreedingCoeff=0.1207;MQ=35.65;MQ0=13;MQRankSum=-2.010;QD=2.02;ReadPosRankSum=-1.629;VQSLOD=-0.1615;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:3,0:3:0:0,0,0	./.	./.	0/0:6,0:1:2.96:0,3,19	0/0:4,0:4:6.02:0,6,81	1/1:3,5:8:6.01:70,6,0	./.	0/1:54,0:23:44:44,0,231	1/1:0,1:1:3.01:53,3,0	0/0:1,0:1:3.01:0,3,40	./.	./.	0/0:2,0:2:3.01:0,3,41	0/0:2,0:2:0.47:0,0,1	0/0:5,0:5:6.02:0,6,81	0/0:3,0:3:6.02:0,6,81	0/0:10,0:10:9.02:0,9,122	0/0:8,0:9:6:0,6,149	0/1:8,0:5:3.11:3,0,147	./.	0/0:1,0:1:3.01:0,3,41	./.	./.	./.	0/0:2,0:2:3.01:0,3,36	0/0:4,0:3:6.02:0,6,81	./.	0/1:7,3:10:27.43:109,0,27
chr10	39675604	.	G	GTA	237.09	PASS	AB=0.884;AC=5;AF=0.179;AN=28;BaseQRankSum=2.010;DP=132;FS=9.432;HRun=0;HaplotypeScore=40.1380;InbreedingCoeff=-0.0120;MQ=28.76;MQ0=13;MQRankSum=-2.276;QD=3.39;ReadPosRankSum=-1.146;VQSLOD=-0.4737;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	0/0:4,0:4:6.02:0,6,81	1/1:2,4:7:3.01:45,3,0	./.	0/1:40,4:13:84.71:176,0,85	./.	0/0:1,0:1:3.01:0,3,40	./.	./.	./.	0/0:1,0:1:0.47:0,0,1	0/0:5,0:5:6.02:0,6,81	0/0:3,0:3:6.02:0,6,81	0/0:10,0:10:6.01:0,6,75	0/1:7,0:8:8.17:8,0,108	0/0:7,0:5:9.40:0,9,92	./.	0/0:1,0:1:2.50:0,2,9	./.	./.	./.	0/0:2,0:2:3.01:0,3,36	0/0:3,0:2:6.02:0,6,81	./.	0/1:9,2:9:29.32:98,0,29
chr10	39675611	.	G	GTA	206.20	PASS	AB=0.895;AC=5;AF=0.208;AN=24;BaseQRankSum=1.347;DP=120;FS=7.546;HRun=0;HaplotypeScore=35.6045;InbreedingCoeff=0.0147;MQ=27.19;MQ0=13;MQRankSum=-1.617;QD=3.44;ReadPosRankSum=-0.054;VQSLOD=0.3364;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	0/0:4,0:4:3.01:0,3,41	1/1:2,4:6:3.01:47,3,0	./.	0/1:34,3:10:32.13:184,0,32	./.	0/0:1,0:1:3.01:0,3,39	./.	./.	./.	0/0:1,0:1:0.47:0,0,1	0/0:5,0:5:6.02:0,6,81	0/0:3,0:3:6.02:0,6,81	./.	0/0:6,0:8:4.66:0,5,115	0/1:7,0:5:18.51:19,0,72	./.	./.	./.	./.	./.	0/0:2,0:2:3.01:0,3,36	0/0:3,0:2:5.51:0,6,49	./.	0/1:6,2:6:3.10:45,0,3
chr10	39675819	.	A	AGT	65.79	PASS	AB=1.000;AC=11;AF=0.344;AN=32;BaseQRankSum=-0.726;DP=135;FS=0.000;HRun=0;HaplotypeScore=40.4977;InbreedingCoeff=0.2504;MQ=70.45;MQ0=14;MQRankSum=0.814;QD=0.76;ReadPosRankSum=-3.322;VQSLOD=0.5517;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:18,0:6:4.01:0,4,15	0/1:21,0:11:0.27:3,0,0	./.	0/1:7,0:7:0.12:0,0,0	0/1:2,0:2:0:0,0,0	0/1:24,0:13:99:128,0,193	./.	0/0:2,0:2:6.02:0,6,75	./.	./.	./.	0/1:3,0:3:0.07:0,0,0	./.	0/0:6,0:6:6.02:0,6,82	0/1:9,0:9:0.11:0,0,0	0/1:4,0:4:0.06:0,0,3	0/0:6,0:3:8.99:0,9,108	0/0:1,0:1:0.89:0,1,2	./.	./.	./.	./.	1/1:4,3:7:0.47:1,0,0	0/0:1,0:1:3.01:0,3,40	0/0:3,0:3:3.22:0,3,12	1/1:5,2:7:2.17:11,2,0
chr10	39675827	.	GTGTA	G	248.20	PASS	AB=0.911;AC=17;AF=0.500;AN=34;BaseQRankSum=1.538;DP=162;FS=3.716;HRun=0;HaplotypeScore=45.9496;InbreedingCoeff=0.0763;MQ=88.18;MQ0=15;MQRankSum=-0.801;QD=1.91;ReadPosRankSum=0.546;VQSLOD=0.5178;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/1:29,0:15:9.09:9,0,34	0/1:34,1:18:3.82:13,0,4	./.	0/1:5,3:8:0.06:0,0,0	0/0:1,1:2:0:0,0,0	0/1:17,7:15:99:124,0,633	./.	1/1:2,0:2:6:53,6,0	./.	./.	./.	0/0:3,0:3:0.37:0,0,1	./.	1/1:6,0:6:6.02:76,6,0	0/0:8,1:9:0.46:0,0,1	1/1:3,1:4:0.56:40,1,0	0/1:4,0:2:2.82:3,0,50	1/1:1,0:1:0.89:2,1,0	1/1:1,0:1:0.47:1,0,0	./.	./.	./.	0/1:7,0:7:0.08:1,0,0	0/0:1,0:1:3.01:0,3,67	0/1:3,0:3:2.96:19,0,3	0/0:6,1:7:2.25:0,2,21
chr10	39675847	.	G	GTA	191.87	PASS	AB=0.909;AC=14;AF=0.412;AN=34;BaseQRankSum=-0.420;DP=275;FS=2.329;HRun=0;HaplotypeScore=83.2125;InbreedingCoeff=0.1096;MQ=100.77;MQ0=13;MQRankSum=1.880;QD=0.79;ReadPosRankSum=-0.467;VQSLOD=1.5639;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/1:55,0:31:22.78:23,0,149	0/1:94,0:49:0.48:0,0,131	./.	0/1:1,7:8:0:0,0,0	0/1:3,0:3:0:0,0,0	0/1:33,0:29:99:99,0,628	./.	0/0:5,0:4:15.04:0,15,174	./.	./.	./.	0/1:1,3:4:0.07:0,0,0	0/1:3,0:3:0:0,0,0	0/0:6,0:6:6.02:0,6,81	0/1:11,0:11:0.11:0,0,0	0/0:7,0:7:8.45:0,8,65	0/0:3,0:2:6.02:0,6,81	0/0:2,0:2:0:0,0,0	./.	./.	./.	./.	1/1:9,0:9:3.48:31,3,0	1/1:2,0:2:5.61:48,6,0	0/1:4,0:4:12.61:35,0,13	0/1:11,0:11:7.77:53,0,8
chr10	39675863	.	GTA	G	507.54	PASS	AB=0.916;AC=15;AF=0.375;AN=40;BaseQRankSum=0.187;DP=352;FS=13.502;HRun=0;HaplotypeScore=93.7790;InbreedingCoeff=0.3301;MQ=100.99;MQ0=19;MQRankSum=-0.824;QD=4.00;ReadPosRankSum=-0.235;VQSLOD=1.3720;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/1:71,1:42:41.64:42,0,89	0/0:116,1:59:10.64:0,11,183	0/1:4,0:4:0:0,0,0	0/1:8,1:9:0:0,0,0	./.	0/0:52,0:33:83.64:0,84,1191	./.	1/1:0,6:6:18.06:243,18,0	1/1:0,1:1:3.01:41,3,0	0/0:2,0:2:3.01:0,3,36	./.	0/1:4,0:4:0.13:0,0,0	0/1:4,0:4:0:0,0,0	0/0:6,1:7:9.03:0,9,141	0/0:11,1:12:3.47:0,3,26	1/1:2,10:12:21.07:279,21,0	0/0:4,0:4:6.02:0,6,95	0/0:2,0:2:2.32:0,2,51	1/1:1,0:1:0.47:1,0,0	./.	./.	./.	0/0:9,1:10:8.87:0,9,157	0/1:1,1:2:15.92:16,0,46	0/0:5,0:5:12.04:0,12,198	0/1:10,2:12:2.83:3,0,286
chr10	39675864	.	TATATATAGC	T	484.12	PASS	AB=0.900;AC=21;AF=0.477;AN=44;BaseQRankSum=-1.984;DP=352;FS=2.262;HRun=0;HaplotypeScore=105.3509;InbreedingCoeff=0.2080;MQ=101.94;MQ0=19;MQRankSum=-0.227;QD=2.62;ReadPosRankSum=2.687;VQSLOD=1.8617;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/1:72,0:42:11.75:12,0,65	0/0:120,0:59:3.11:0,3,73	0/1:0,4:4:0.09:0,0,0	0/1:9,0:9:0:0,0,0	0/1:3,0:3:0:0,0,0	1/1:52,0:33:38.08:357,38,0	./.	0/0:6,0:5:9.95:0,10,253	0/0:1,0:1:3.01:0,3,70	1/1:2,0:2:3.01:50,3,0	./.	0/0:4,0:4:0.21:0,0,0	0/1:3,1:4:0:0,0,0	1/1:7,0:7:4.73:54,5,0	1/1:12,0:12:0.68:45,1,0	0/0:12,0:12:2.47:0,2,238	0/1:4,0:4:18.48:23,0,18	0/0:2,0:2:3.01:0,3,31	1/1:1,0:1:0.47:1,0,0	./.	./.	1/1:1,0:1:2.99:24,3,0	0/0:10,0:10:1.97:0,2,43	1/1:2,0:2:4.77:24,5,0	0/0:5,0:5:1.46:0,1,29	0/1:12,0:12:8.13:8,0,90
chr10	39676583	.	G	GC	13032.14	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-1.010;DP=533;FS=1.742;HRun=5;HaplotypeScore=91.5426;InbreedingCoeff=0.9700;MQ=75.94;MQ0=0;MQRankSum=-3.796;QD=27.91;ReadPosRankSum=2.913;VQSLOD=5.0915;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,108,1159	1/1:1,4:5:9.03:115,9,0	0/0:11,0:11:20.93:0,21,209	0/0:18,0:18:25.68:0,26,287	1/1:5,0:16:28.99:163,29,0	1/1:3,14:17:42.14:553,42,0	1/1:2,25:27:66:868,66,0	1/1:4,15:19:39.60:513,40,0	1/1:0,23:23:54.18:709,54,0	1/1:2,13:15:36.12:472,36,0	1/1:0,9:9:27.09:355,27,0	1/1:2,23:25:63.18:811,63,0	1/1:2,15:17:45.14:578,45,0	1/1:1,17:18:48.14:616,48,0	1/1:1,0:17:49.01:271,49,0	1/1:6,0:22:60.66:334,61,0	1/1:7,0:34:72.63:388,73,0	1/1:0,22:22:63.20:829,63,0	1/1:2,7:9:21.07:276,21,0	1/1:2,16:18:42.14:552,42,0	1/1:1,31:32:84.27:1105,84,0	1/1:2,0:13:37.64:208,38,0	1/1:2,16:18:48.15:622,48,0	1/1:4,21:25:51.17:671,51,0	1/1:3,19:22:60.13:749,60,0	1/1:7,13:20:42.14:552,42,0	1/1:3,13:16:42.13:538,42,0	1/1:4,4:8:15.04:183,15,0
chr10	39676654	.	TC	T	6344.30	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=4.629;DP=574;FS=0.000;HRun=8;HaplotypeScore=85.7153;InbreedingCoeff=0.9826;MQ=80.48;MQ0=0;MQRankSum=-2.360;QD=23.50;ReadPosRankSum=2.500;VQSLOD=5.3898;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,111,1265	0/0:6,0:6:18:0,18,197	0/0:20,0:20:40.31:0,40,394	0/0:20,0:19:36.32:0,36,358	1/1:2,21:23:60:558,60,0	0/0:16,0:16:45.13:0,45,533	0/0:26,0:26:69.18:0,69,808	1/1:4,12:16:33.04:314,33,0	0/0:23,0:23:54.17:0,54,652	0/0:17,0:17:45.13:0,45,534	0/0:4,0:4:9.03:0,9,108	0/0:27,0:27:75.20:0,75,881	0/0:3,0:16:46:0,46,240	0/0:7,0:19:50.27:0,50,257	1/1:6,7:13:32.95:301,33,0	1/1:1,26:27:72.10:690,72,0	1/1:2,31:33:93.13:891,93,0	0/0:23,0:23:69.15:0,69,802	1/1:8,9:17:10.44:267,10,0	1/1:2,13:15:42.07:405,42,0	1/1:15,12:27:50.89:461,51,0	1/1:3,17:20:45.07:435,45,0	0/0:14,0:14:39.12:0,39,470	0/0:29,0:29:78.21:0,78,921	1/1:3,25:28:75.07:713,75,0	1/1:4,16:20:60.07:568,60,0	1/1:3,21:24:63.08:598,63,0	1/1:0,7:7:15.02:145,15,0
chr10	39678186	.	G	GGA	4615.29	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=10.308;DP=670;FS=26.034;HRun=0;HaplotypeScore=166.4113;InbreedingCoeff=0.9997;MQ=83.47;MQ0=0;MQRankSum=-3.981;QD=39.79;ReadPosRankSum=2.846;VQSLOD=3.3816;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,111,1805	0/0:10,0:10:27.01:0,27,434	0/0:22,0:22:66.13:0,66,974	0/0:23,0:23:33.74:0,34,841	0/0:25,0:25:72.18:0,72,1110	1/1:2,18:20:43.75:796,44,0	1/1:1,18:19:54.18:708,54,0	0/0:29,0:29:81.27:0,81,1299	1/1:2,28:30:90.29:1277,90,0	0/0:21,0:21:60.11:0,60,931	0/0:15,0:15:42.14:0,42,635	0/0:21,0:21:54.16:0,54,790	1/1:1,24:25:57.62:947,58,0	1/1:1,21:22:63:887,63,0	0/0:31,0:31:93.30:0,93,1489	0/0:32,0:32:96.30:0,96,1517	0/0:36,0:36:99:0,108,1683	0/0:14,0:14:39.13:0,39,601	0/0:15,0:15:45.15:0,45,734	0/0:26,0:26:78.25:0,78,1246	0/0:35,0:35:99:0,105,1609	0/0:27,0:27:78.25:0,78,1247	0/0:18,0:18:51.17:0,51,761	0/0:25,0:25:45.10:0,45,673	0/0:23,0:23:69.24:0,69,1125	0/0:25,0:25:75.26:0,75,1222	0/0:21,0:21:60.20:0,60,962	0/0:23,0:23:69.18:0,69,1049
chr10	39678187	.	C	CGA	4713.76	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=10.763;DP=676;FS=22.576;HRun=0;HaplotypeScore=168.4409;InbreedingCoeff=0.9997;MQ=83.18;MQ0=0;MQRankSum=-5.102;QD=38.96;ReadPosRankSum=2.791;VQSLOD=3.6967;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,111,1809	0/0:10,0:10:27.01:0,27,354	0/0:23,0:23:66.19:0,66,1026	0/0:21,0:22:39.57:0,40,843	0/0:23,0:23:66.21:0,66,1051	1/1:2,18:20:43.12:794,43,0	1/1:2,18:20:48.12:702,48,0	0/0:30,0:30:87.28:0,87,1353	1/1:3,28:31:77.03:1279,77,0	0/0:21,0:21:60.10:0,60,778	0/0:15,0:15:41.93:0,42,432	0/0:21,0:21:51:0,51,587	1/1:1,24:25:72.23:982,72,0	1/1:4,21:25:60.20:956,60,0	0/0:32,0:32:93.29:0,93,1470	0/0:32,0:32:93.30:0,93,1490	0/0:35,0:35:99:0,105,1637	0/0:14,0:14:39.09:0,39,521	0/0:16,0:16:45.15:0,45,733	0/0:26,0:26:75.26:0,75,1222	0/0:34,0:34:99:0,99,1563	0/0:28,0:28:81.25:0,81,1273	0/0:18,0:18:50.99:0,51,570	0/0:24,0:24:44.87:0,45,481	0/0:23,0:23:69.24:0,69,1125	0/0:25,0:25:75.25:0,75,1192	0/0:21,0:21:60.19:0,60,951	0/0:25,0:25:69.18:0,69,1049
chr10	39678190	.	ACTAAGGCAGGGAATGCGTC	A	12773.29	PASS	AB=0.923;AC=15;AF=0.268;AN=56;BaseQRankSum=8.240;DP=679;FS=1.425;HRun=0;HaplotypeScore=377.2236;InbreedingCoeff=0.9077;MQ=83.07;MQ0=0;MQRankSum=-12.710;QD=88.70;ReadPosRankSum=2.693;VQSLOD=3.8641;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,114,9241	1/1:1,9:10:24.05:1303,24,0	0/0:23,0:23:60.12:0,60,3300	0/0:22,0:22:58.71:0,59,2904	0/0:22,0:22:63.22:0,63,5325	0/0:20,0:20:60.16:0,60,4905	0/0:20,0:20:60.21:0,60,4286	0/0:31,0:31:84.27:0,84,6179	0/0:30,0:30:90.31:0,90,7017	1/1:3,18:21:47.41:2605,47,0	1/1:2,11:13:30.10:1523,30,0	1/1:5,16:21:33.11:1792,33,0	0/0:26,0:26:75.24:0,75,6077	0/0:25,0:25:72.25:0,72,5988	0/0:32,0:32:93.32:0,93,7430	0/0:32,0:32:93.32:0,93,8112	0/0:35,0:35:99:0,105,8150	1/1:7,7:14:21.07:1139,21,0	0/0:19,0:19:51.18:0,51,3614	0/0:27,0:27:81.27:0,81,6504	0/0:32,0:32:96.33:0,96,8169	0/0:30,0:30:90.30:0,90,7490	1/1:3,15:18:45.15:2338,45,0	1/1:7,16:23:36.40:1956,36,0	0/0:25,0:25:75.22:0,75,5443	0/1:22,2:24:99:117,0,5432	0/0:21,0:21:60.21:0,60,4611	0/0:25,0:25:69.24:0,69,6039
chr10	39678939	.	CGTGT	C	866.47	PASS	AB=0.889;AC=30;AF=0.682;AN=44;BaseQRankSum=-0.558;DP=498;FS=3.859;HRun=0;HaplotypeScore=90.0646;InbreedingCoeff=-0.0370;MQ=64.88;MQ0=27;MQRankSum=0.643;QD=2.62;ReadPosRankSum=1.944;VQSLOD=1.4669;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:12,0:11:4.35:28,4,0	1/1:4,1:5:0.94:2,1,0	./.	./.	0/1:15,0:16:8.71:9,0,38	0/1:14,0:15:13.96:14,0,46	0/1:29,0:29:54.37:54,0,78	./.	0/1:10,0:13:2.56:3,0,62	0/1:15,0:15:0:0,0,0	0/1:7,0:7:0:0,0,0	1/1:8,0:8:3.01:38,3,0	0/0:8,0:8:12.04:0,12,238	0/0:7,0:7:3.01:0,3,51	0/1:13,1:14:38.92:39,0,58	0/1:12,4:17:18.08:41,0,18	1/1:18,9:28:7.97:98,8,0	0/1:15,9:25:28.22:243,0,28	./.	1/1:6,0:13:6.01:56,6,0	1/1:31,0:31:8.05:64,8,0	./.	1/1:9,0:9:2.87:15,3,0	0/1:23,2:29:26.16:125,0,26	1/1:11,0:15:8.60:65,9,0	1/1:12,0:17:10.13:73,10,0	1/1:10,0:12:2.83:27,3,0	./.
chr10	39678987	.	T	TGA	54.65	PASS	AB=1.000;AC=5;AF=0.093;AN=54;BaseQRankSum=3.057;DP=437;FS=9.576;HRun=0;HaplotypeScore=90.2614;InbreedingCoeff=0.4443;MQ=70.67;MQ0=14;MQRankSum=-2.802;QD=1.66;ReadPosRankSum=0.924;VQSLOD=1.0441;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:14:29.94:0,30,243	0/0:6,0:6:0.47:0,0,1	0/0:24,0:15:38.23:0,38,411	0/0:18,0:13:29.15:0,29,308	0/0:14,0:14:2.99:0,3,24	0/0:14,0:14:3:0,3,32	0/0:23,0:22:5.97:0,6,54	0/0:13,0:12:35.91:0,36,313	0/0:16,0:15:8.64:0,9,60	0/0:12,0:11:0:0,0,0	0/0:8,0:8:0:0,0,0	0/0:16,0:16:2.88:0,3,15	1/1:2,11:13:6.02:92,6,0	1/1:2,13:15:3.01:55,3,0	0/0:16,0:15:9.16:0,9,61	0/0:16,0:16:1.70:0,2,22	0/0:25,0:25:14.16:0,14,69	0/0:26,0:26:17.04:0,17,84	0/0:12,0:12:32.48:0,32,269	0/0:20,0:19:38.93:0,39,321	0/0:21,0:19:44.92:0,45,368	./.	0/0:13,0:12:0:0,0,0	0/0:23,0:23:20.94:0,21,118	0/0:16,0:16:38.95:0,39,324	0/0:18,0:17:42.01:0,42,372	0/0:9,0:9:23.90:0,24,188	0/1:5,0:3:6.14:6,0,18
chr10	39679778	.	GAA	G	5837.89	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-8.470;DP=471;FS=3.196;HRun=10;HaplotypeScore=85.6649;InbreedingCoeff=0.9600;MQ=78.95;MQ0=0;MQRankSum=-1.453;QD=28.48;ReadPosRankSum=6.164;VQSLOD=5.1390;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:1,1:20:9.49:0,9,104	1/1:1,4:5:12.03:134,12,0	0/0:13,0:13:4.12:0,4,160	0/0:11,0:11:15.13:0,15,167	1/1:2,24:26:69.17:769,69,0	0/0:12,0:13:35.82:0,36,454	0/0:10,0:11:27.09:0,27,407	0/0:5,0:21:40.31:0,40,143	0/0:15,0:15:39.10:0,39,592	1/1:1,29:30:87.21:947,87,0	1/1:1,18:19:57.14:627,57,0	1/1:4,11:15:33.08:367,33,0	0/0:20,0:20:51.16:0,51,781	0/0:19,0:19:45.14:0,45,673	1/1:1,16:17:45.12:502,45,0	1/1:3,12:15:33.07:368,33,0	1/1:1,18:19:51.13:569,51,0	1/1:2,5:7:18.01:187,18,0	0/0:2,0:19:45.42:0,45,172	0/0:2,0:21:47.41:0,47,163	0/0:0,0:5:12.48:0,12,43	1/1:1,11:12:33.09:368,33,0	1/1:4,13:17:36.09:400,36,0	1/1:3,20:23:54.14:602,54,0	0/0:3,0:16:32.44:0,32,112	0/0:3,1:24:22.93:0,23,172	0/0:4,0:28:60.14:0,60,223	0/0:0,0:10:24.95:0,25,86
chr10	39679832	.	A	AT	1350.39	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-1.910;DP=475;FS=2.675;HRun=9;HaplotypeScore=78.0954;InbreedingCoeff=0.9824;MQ=76.93;MQ0=0;MQRankSum=-2.579;QD=23.69;ReadPosRankSum=-0.797;VQSLOD=4.1445;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:62.96:0,63,543	1/1:0,5:5:15.04:166,15,0	0/0:13,0:12:22.53:0,23,184	0/0:13,0:13:14.99:0,15,129	0/0:24,0:24:23.64:0,24,412	0/0:1,0:12:22.41:0,22,66	0/0:3,0:14:18.33:0,18,54	0/0:26,0:25:65.96:0,66,567	0/0:0,0:15:30.56:0,31,90	1/1:10,16:25:60.63:659,61,0	1/1:2,15:18:44.87:452,45,0	0/0:10,0:11:32.03:0,32,266	0/0:0,0:16:30.45:0,30,90	0/0:2,0:19:28.44:0,28,84	0/0:19,0:19:41.98:0,42,364	0/0:14,0:15:38.03:0,38,319	0/0:19,0:18:22.35:0,22,250	1/1:1,7:8:21.06:232,21,0	0/0:17,0:17:41.99:0,42,365	0/0:20,0:20:50.98:0,51,443	0/0:8,0:8:20.99:0,21,182	0/0:9,0:9:23.99:0,24,208	0/0:23,0:23:59.96:0,60,517	0/0:18,0:19:52.97:0,53,438	0/0:14,0:14:35.98:0,36,313	0/0:27,0:27:59.96:0,60,521	0/0:28,0:28:74.95:0,75,648	0/0:15,0:15:44.99:0,45,391
chr10	39680804	.	T	TTG	790.57	PASS	AB=0.963;AC=22;AF=0.423;AN=52;BaseQRankSum=-5.522;DP=705;FS=6.733;HRun=0;HaplotypeScore=122.3349;InbreedingCoeff=-0.1762;MQ=54.83;MQ0=24;MQRankSum=3.335;QD=1.91;ReadPosRankSum=-2.069;VQSLOD=1.6258;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:31:0.47:0,0,1	1/1:5,0:4:5.58:33,6,0	./.	./.	0/1:22,0:22:11.96:12,0,14	0/0:19,0:19:5.57:0,6,28	0/0:27,0:27:5.43:0,5,31	1/1:42,0:39:4.22:24,4,0	0/0:22,0:22:11.39:0,11,60	0/1:24,0:23:11.93:19,0,12	1/1:15,0:15:4.04:12,4,0	0/0:31,0:31:11.40:0,11,115	0/0:21,0:21:9.88:0,10,45	0/0:25,0:24:11.14:0,11,55	0/1:30,0:30:42.46:42,0,57	1/1:20,1:21:12.18:71,12,0	0/1:30,0:28:32.24:33,0,32	0/1:13,0:13:11.79:31,0,12	0/1:13,0:13:16.27:16,0,18	0/1:21,0:20:18:36,0,18	0/1:27,13:40:16.66:118,0,17	0/1:9,0:9:9.65:10,0,23	0/1:15,0:15:12.15:26,0,12	0/0:40,0:39:28.38:0,28,114	0/1:24,0:22:44.59:81,0,45	0/1:34,0:33:4.09:160,0,4	0/1:18,11:29:14.28:192,0,14	0/1:23,0:25:19.78:27,0,20
chr10	39680843	.	TGTGTGTGC	T	1665.67	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=4.216;DP=636;FS=0.559;HRun=0;HaplotypeScore=154.4901;InbreedingCoeff=0.4757;MQ=61.32;MQ0=17;MQRankSum=-2.830;QD=7.44;ReadPosRankSum=-0.332;VQSLOD=2.6816;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:25:6.28:0,6,194	0/0:5,0:4:9.03:0,9,183	0/0:20,0:10:29.82:0,30,280	0/0:41,0:25:45.74:0,46,497	0/1:14,0:14:15.07:15,0,472	1/1:11,2:13:6.02:149,6,0	1/1:6,15:21:11.88:243,12,0	0/0:25,0:22:60.92:0,61,554	1/1:6,21:27:15.35:307,15,0	0/1:24,0:23:99:114,0,560	0/0:17,0:17:12.01:0,12,294	0/1:29,0:29:61.33:61,0,455	1/1:6,17:22:15.04:384,15,0	1/1:3,23:26:15.05:360,15,0	0/0:27,0:27:45.14:0,45,1231	0/0:16,0:16:17.67:0,18,441	0/1:33,0:30:99:163,0,912	0/0:20,0:20:15.94:0,16,502	0/0:17,0:17:49.90:0,50,633	0/0:13,0:12:23.24:0,23,342	0/0:38,0:37:62.65:0,63,1070	0/0:12,0:12:14.60:0,15,323	0/1:14,0:14:48.72:49,0,191	0/0:43,0:42:18.62:0,19,386	0/0:19,0:17:36.04:0,36,930	0/0:35,0:34:67.84:0,68,1675	0/0:23,0:23:47.69:0,48,1025	0/0:15,0:15:38.95:0,39,603
chr10	39680849	.	TGC	T	2296.54	PASS	AB=0.995;AC=24;AF=0.429;AN=56;BaseQRankSum=6.183;DP=604;FS=15.708;HRun=0;HaplotypeScore=100.3825;InbreedingCoeff=0.3549;MQ=66.73;MQ0=12;MQRankSum=-1.706;QD=7.09;ReadPosRankSum=1.680;VQSLOD=2.3222;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:44.01:0,44,279	0/1:4,0:3:17.17:17,0,18	0/0:22,0:13:38.79:0,39,357	0/0:44,0:29:59.41:0,59,587	0/1:15,0:15:23.25:120,0,23	1/1:13,0:13:5.98:47,6,0	1/1:17,0:17:8.74:60,9,0	0/0:21,0:20:45.77:0,46,342	1/1:24,0:24:9.64:73,10,0	0/1:19,0:18:13.66:237,0,14	0/0:13,0:13:5.42:0,5,51	1/1:23,7:30:66.46:698,66,0	1/1:19,0:18:14.86:141,15,0	1/1:23,0:23:11.74:79,12,0	0/1:25,1:26:4.97:5,0,249	0/0:17,0:17:14.14:0,14,111	0/1:32,0:29:99:232,0,106	0/0:17,0:17:14.26:0,14,120	0/0:20,0:20:14.03:0,14,306	0/0:12,0:11:4.12:0,4,151	0/0:34,0:34:59.59:0,60,566	0/1:11,0:11:26.38:26,0,88	1/1:14,1:15:17.73:209,18,0	1/1:4,39:42:35.94:492,36,0	0/1:19,0:18:13.87:14,0,253	0/0:29,0:29:11.95:0,12,500	0/0:21,0:21:36.34:0,36,331	0/1:14,0:14:40.37:40,0,77
chr10	39680851	.	C	CGT	4923.84	PASS	AB=1.000;AC=35;AF=0.625;AN=56;BaseQRankSum=2.918;DP=583;FS=4.755;HRun=0;HaplotypeScore=99.8946;InbreedingCoeff=0.8200;MQ=70.50;MQ0=12;MQRankSum=0.340;QD=13.68;ReadPosRankSum=4.185;VQSLOD=4.5258;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:25:45.61:0,46,576	1/1:2,2:3:3.01:55,3,0	0/0:25,0:16:45.13:0,45,599	0/0:45,0:30:68.40:0,68,938	1/1:13,2:15:36.62:441,37,0	1/1:3,10:13:3.74:12,4,0	1/1:17,0:17:8.90:31,9,0	0/0:18,0:17:48.15:0,48,652	1/1:24,0:24:7.30:26,7,0	1/1:3,17:20:51.13:721,51,0	1/1:2,10:13:6.02:110,6,0	1/1:28,0:28:63.14:651,63,0	1/1:19,0:18:13.31:84,13,0	1/1:23,0:23:10.26:60,10,0	1/1:5,19:26:35.80:543,36,0	1/1:0,17:17:15.36:270,15,0	1/1:26,5:28:71.35:964,71,0	1/1:2,15:18:13.29:223,13,0	0/0:17,0:17:48.15:0,48,650	0/0:11,0:10:21.05:0,21,263	0/0:32,0:32:57.04:0,57,701	1/1:1,9:10:9.03:141,9,0	1/1:12,1:13:28.41:337,28,0	1/1:41,1:41:30.69:222,31,0	0/0:18,0:18:24.03:0,24,320	0/1:26,0:26:31.94:32,0,739	0/0:19,0:19:30.03:0,30,342	0/0:12,0:12:23.56:0,24,287
chr10	39682471	.	C	CA	1282.92	PASS	AC=44;AF=0.917;AN=48;BaseQRankSum=3.022;DP=92;FS=7.705;HRun=0;HaplotypeScore=15.6605;InbreedingCoeff=0.2971;MQ=99.49;MQ0=2;MQRankSum=-2.041;QD=20.05;ReadPosRankSum=-4.075;VQSLOD=3.2247;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,1:1:3.01:34,3,0	1/1:0,3:3:3.01:45,3,0	0/0:9,0:6:18.06:0,18,240	0/0:16,0:16:38.99:0,39,502	1/1:0,0:3:5.95:53,6,0	1/1:1,0:1:3.01:36,3,0	1/1:0,3:3:3.01:34,3,0	1/1:0,7:7:21.01:213,21,0	1/1:4,0:4:11.99:107,12,0	1/1:0,5:5:15.01:150,15,0	./.	1/1:0,2:2:3.01:37,3,0	./.	1/1:0,3:3:2.94:18,3,0	1/1:1,0:1:2.99:24,3,0	1/1:0,0:3:3.01:35,3,0	1/1:3,0:3:2.99:24,3,0	1/1:2,1:3:5.97:45,6,0	1/1:1,1:5:15.02:147,15,0	1/1:0,0:4:9.03:110,9,0	1/1:1,0:1:2.98:21,3,0	1/1:2,0:2:6.01:70,6,0	1/1:2,0:2:3.01:45,3,0	./.	1/1:2,0:2:6:51,6,0	1/1:1,0:1:3:26,3,0	1/1:0,4:4:6.02:78,6,0	./.
chr10	39683332	.	G	GA	6066.17	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-0.390;DP=321;FS=11.753;HRun=8;HaplotypeScore=56.6678;InbreedingCoeff=0.9259;MQ=82.90;MQ0=1;MQRankSum=-0.845;QD=26.96;ReadPosRankSum=0.628;VQSLOD=4.7786;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:45.01:0,45,412	1/1:1,2:3:6.02:69,6,0	0/0:11,0:10:20.97:0,21,184	0/0:15,0:13:17.53:0,18,151	1/1:3,9:12:18.05:208,18,0	0/0:10,0:10:18.01:0,18,165	0/0:12,0:12:30.01:0,30,275	1/1:0,19:19:57.15:646,57,0	0/0:11,0:11:27:0,27,243	1/1:6,9:15:30.05:326,30,0	1/1:2,3:5:11.99:124,12,0	1/1:5,8:13:30.07:329,30,0	0/0:11,0:11:24.01:0,24,220	0/0:5,0:5:12:0,12,110	1/1:5,10:15:30.08:337,30,0	1/1:4,8:12:27.07:303,27,0	1/1:0,10:10:30.09:346,30,0	1/1:1,15:16:39.12:449,39,0	1/1:2,18:20:51.15:588,51,0	1/1:3,5:8:12.04:139,12,0	1/1:5,12:17:39.11:442,39,0	1/1:1,7:8:21.02:228,21,0	1/1:1,11:12:33.06:366,33,0	1/1:1,6:7:18.05:208,18,0	1/1:0,4:4:12.04:138,12,0	1/1:0,8:8:24.07:277,24,0	1/1:6,13:20:45.12:510,45,0	1/1:0,1:1:3.01:35,3,0
chr10	39683362	.	C	CGT	102.80	PASS	AC=4;AF=0.077;AN=52;BaseQRankSum=-0.888;DP=213;FS=6.216;HRun=0;HaplotypeScore=60.3455;InbreedingCoeff=0.6093;MQ=86.89;MQ0=3;MQRankSum=-1.562;QD=11.42;ReadPosRankSum=0.004;VQSLOD=2.3800;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:25.20:0,25,411	./.	0/0:26,0:13:28.66:0,29,309	0/0:24,0:16:17.82:0,18,181	0/0:1,0:1:3.01:0,3,38	0/0:7,0:7:12.92:0,13,160	0/0:9,0:9:24.08:0,24,347	0/0:7,0:7:18.53:0,19,260	0/0:5,0:5:12.01:0,12,129	0/0:6,0:7:8.71:0,9,114	0/0:3,0:3:6.01:0,6,68	0/0:8,0:8:21.92:0,22,246	1/1:0,5:5:6.02:110,6,0	1/1:2,2:4:9:94,9,0	0/0:8,0:8:24.07:0,24,291	0/0:4,0:6:12.02:0,12,121	0/0:9,0:9:24.06:0,24,276	0/0:8,0:8:24.07:0,24,309	0/0:10,0:10:27.08:0,27,356	0/0:8,0:8:14.94:0,15,164	0/0:13,0:13:30.10:0,30,413	0/0:4,0:4:9.02:0,9,114	0/0:7,0:7:14.92:0,15,156	0/0:4,0:5:12.04:0,12,151	./.	0/0:3,0:3:6.02:0,6,86	0/0:8,0:8:21.07:0,21,281	0/0:2,0:2:6.02:0,6,79
chr10	39683363	.	GTC	G	105.02	PASS	AB=0.855;AC=8;AF=0.148;AN=54;BaseQRankSum=0.286;DP=213;FS=33.467;HRun=0;HaplotypeScore=53.7764;InbreedingCoeff=-0.2265;MQ=86.82;MQ0=3;MQRankSum=-2.110;QD=2.23;ReadPosRankSum=3.449;VQSLOD=0.2245;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:6.43:0,6,268	0/0:1,0:1:3:0,3,25	0/0:27,0:14:37.37:0,37,311	0/0:25,0:16:17.11:0,17,205	0/0:1,0:1:3:0,3,25	0/0:6,0:7:16.82:0,17,187	0/0:10,0:10:26.95:0,27,321	0/0:8,0:8:0.27:0,0,129	0/0:5,0:5:14.70:0,15,161	0/1:6,0:6:15.14:15,0,96	0/1:1,2:3:17.97:22,0,18	0/1:6,2:8:41.37:41,0,91	0/0:6,0:6:6.01:0,6,58	0/0:4,0:4:8.90:0,9,68	0/1:6,2:8:40.17:59,0,40	0/1:6,0:6:23.30:23,0,37	0/1:7,1:8:37.04:42,0,37	0/0:8,0:8:21.46:0,21,247	0/0:10,0:10:29.98:0,30,271	0/0:7,0:8:16.22:0,16,114	0/0:12,0:13:28.64:0,29,232	0/1:2,1:3:19.99:20,0,38	0/0:6,0:6:9.27:0,9,81	0/1:5,0:5:9.96:10,0,33	./.	0/0:3,0:3:6:0,6,52	0/0:7,0:8:23.58:0,24,181	0/0:2,0:2:6.02:0,6,69
chr10	39685308	.	T	TAAGAACTG	19119.59	PASS	AB=0.922;AC=36;AF=0.643;AN=56;BaseQRankSum=14.230;DP=513;FS=33.568;HRun=0;HaplotypeScore=235.9893;InbreedingCoeff=0.6377;MQ=68.61;MQ0=1;MQRankSum=-15.663;QD=73.26;ReadPosRankSum=2.312;VQSLOD=3.2849;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:58:99:0,169,4715	1/1:3,2:5:12.04:461,12,0	0/0:37,0:31:85.08:0,85,1759	0/0:31,0:28:64.93:0,65,1468	1/1:10,8:17:36.11:1213,36,0	0/0:24,0:24:69.69:0,70,1951	0/0:26,0:26:78.25:0,78,2138	1/1:16,0:14:42.09:1041,42,0	0/0:20,0:20:60.17:0,60,1641	1/1:15,7:22:54.19:2219,54,0	1/1:4,3:6:18.02:558,18,0	1/1:10,7:17:4.49:1412,4,0	0/0:19,0:19:54.17:0,54,1527	0/0:37,0:37:99:0,111,3101	1/1:7,9:16:8.23:1796,8,0	1/1:8,6:14:39.10:1481,39,0	0/1:17,0:17:99:598,0,349	0/1:9,3:12:99:780,0,135	1/1:8,1:9:18.49:488,18,0	1/1:15,3:17:42:1159,42,0	0/1:14,1:15:99:327,0,195	1/1:10,4:12:33.09:1073,33,0	1/1:3,2:5:15.05:502,15,0	0/1:18,1:19:99:553,0,252	1/1:4,2:6:18.02:522,18,0	1/1:10,3:12:36.07:979,36,0	1/1:11,5:16:45.15:1809,45,0	1/1:2,0:2:5.98:150,6,0
chr10	39685322	.	G	GTAA	4030.49	PASS	AB=0.777;AC=26;AF=0.481;AN=54;BaseQRankSum=12.192;DP=419;FS=16.839;HRun=0;HaplotypeScore=196.4441;InbreedingCoeff=0.4122;MQ=72.31;MQ0=2;MQRankSum=-10.712;QD=26.52;ReadPosRankSum=0.049;VQSLOD=2.4357;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,157,2723	1/1:1,2:3:4.19:133,4,0	0/0:36,0:29:62.98:0,63,1160	0/0:34,0:29:46.51:0,47,977	1/1:4,8:12:21.54:467,22,0	0/0:24,0:24:70.48:0,70,1216	0/0:22,0:22:66.21:0,66,1129	0/0:7,0:5:4.37:0,4,40	0/0:18,0:18:54.19:0,54,952	1/1:1,7:8:17.89:354,18,0	1/1:5,3:4:8.52:144,9,0	0/1:7,7:14:28.06:463,0,28	0/0:22,0:22:66.23:0,66,1163	0/0:33,0:33:99:0,99,1718	0/1:5,7:13:19.71:625,0,20	1/1:3,6:9:15.97:348,16,0	0/0:14,0:14:27.09:0,27,465	0/1:8,3:11:99:228,0,171	0/0:3,1:4:0.88:0,1,11	1/1:5,3:6:6.63:199,7,0	0/1:12,1:13:77.03:77,0,247	1/1:6,4:7:6.53:162,7,0	1/1:4,2:4:4.79:124,5,0	0/1:14,1:15:63.93:64,0,256	1/1:2,2:4:7.81:151,8,0	0/1:5,3:7:83.67:140,0,84	1/1:4,5:10:15.68:354,16,0	./.
chr10	39685346	.	G	GGAAAGCCA	6326.51	PASS	AB=0.831;AC=20;AF=0.370;AN=54;BaseQRankSum=11.121;DP=547;FS=13.120;HRun=0;HaplotypeScore=285.9607;InbreedingCoeff=-0.3201;MQ=61.69;MQ0=5;MQRankSum=-9.875;QD=22.59;ReadPosRankSum=-0.857;VQSLOD=2.3906;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,156,4292	0/1:5,1:6:99:139,0,245	0/0:33,0:29:70.71:0,71,1473	0/0:43,0:38:55:0,55,1787	1/1:14,1:14:2.70:75,3,0	0/0:29,0:29:85.52:0,86,2353	0/0:19,0:19:54.17:0,54,1413	0/1:35,0:28:99:296,0,1312	0/0:18,0:18:54.19:0,54,1581	0/1:11,1:11:99:246,0,421	0/1:10,4:8:99:319,0,293	0/1:11,6:17:99:780,0,577	0/0:18,0:18:54.17:0,54,1481	0/0:33,0:33:96.31:0,96,2710	0/1:14,5:19:99:669,0,801	0/1:18,4:22:99:485,0,1127	0/0:18,0:18:45.15:0,45,1300	0/1:11,2:13:99:247,0,526	0/1:21,0:20:99:385,0,716	0/1:11,5:12:99:247,0,318	0/1:14,2:16:99:102,0,759	0/1:5,7:9:68.98:525,0,69	1/1:9,3:8:9.03:299,9,0	0/1:16,2:18:99:197,0,748	0/1:7,2:7:87.09:187,0,87	0/1:9,3:12:99:445,0,403	0/1:6,4:10:99:684,0,343	./.
chr10	39685352	.	G	GTAA	1745.01	PASS	AB=0.795;AC=18;AF=0.333;AN=54;BaseQRankSum=10.425;DP=530;FS=6.958;HRun=0;HaplotypeScore=223.4870;InbreedingCoeff=-0.2184;MQ=62.09;MQ0=5;MQRankSum=-9.178;QD=8.31;ReadPosRankSum=6.236;VQSLOD=2.0044;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:58:99:0,169,2916	0/1:5,1:6:20.29:20,0,127	0/0:32,0:26:63.45:0,63,936	0/0:45,0:39:88.85:0,89,1335	1/1:14,1:14:2.03:6,2,0	0/0:35,0:35:97.55:0,98,1613	0/0:20,0:20:54.18:0,54,944	0/0:26,0:19:54.08:0,54,890	0/0:20,0:20:57.20:0,57,994	0/1:7,1:7:49.75:50,0,246	0/1:9,4:8:99:110,0,241	0/1:9,6:15:99:314,0,380	0/0:18,0:18:54.17:0,54,923	0/0:37,0:37:99:0,111,1863	0/1:17,5:22:99:246,0,562	0/1:15,4:19:99:205,0,683	0/0:16,0:16:45.15:0,45,768	0/1:8,2:10:99:106,0,320	0/0:13,0:12:29.61:0,30,527	0/1:12,5:13:44.21:44,0,242	0/1:13,2:15:1.02:1,0,456	0/1:3,7:9:30.73:211,0,31	1/1:8,3:9:5.81:66,6,0	0/1:16,2:18:14.19:14,0,462	0/1:7,2:7:69.68:70,0,126	0/1:7,3:9:99:176,0,290	0/1:7,4:11:99:262,0,280	./.
chr10	39685364	.	GATGTGAGAACTGGGGAGGTGAGAGCTAGGA	G	2590.34	PASS	AB=0.976;AC=18;AF=0.333;AN=54;BaseQRankSum=3.275;DP=563;FS=13.027;HRun=0;HaplotypeScore=480.7949;InbreedingCoeff=-0.4919;MQ=57.85;MQ0=3;MQRankSum=-7.025;QD=8.99;ReadPosRankSum=-4.443;VQSLOD=-0.4737;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,162,4886	0/1:6,0:6:7.18:7,0,74	0/0:32,0:28:41.36:0,41,1007	0/0:43,0:37:51.99:0,52,1108	0/1:4,11:14:26.50:26,0,28	0/0:37,0:37:99:0,105,3245	0/0:22,0:22:63.17:0,63,1649	0/1:30,0:24:99:175,0,296	0/0:20,0:20:57.09:0,57,1718	0/1:9,0:7:47.32:47,0,54	0/1:15,0:9:80.12:100,0,80	0/1:23,0:23:45.77:46,0,350	0/0:17,0:17:48.06:0,48,1776	0/0:36,0:36:99:0,102,3125	0/1:27,0:27:99:276,0,308	0/1:22,0:22:98.54:99,0,254	0/1:18,0:18:82.07:457,0,82	0/1:9,0:9:51.19:86,0,51	0/1:7,0:7:42.47:42,0,71	0/1:19,0:13:56:112,0,56	0/1:14,0:14:20.31:334,0,20	0/0:13,0:11:21.09:0,21,141	0/1:13,0:10:34.19:59,0,34	0/1:17,0:17:28.14:551,0,28	0/1:11,0:8:35.12:92,0,35	0/1:19,0:17:99:182,0,206	0/1:14,0:13:55.21:55,0,221	./.
chr10	39685588	.	GGAAGTGAGAGCTGGA	G	3832.51	PASS	AB=0.962;AC=33;AF=0.589;AN=56;BaseQRankSum=11.807;DP=508;FS=0.952;HRun=0;HaplotypeScore=179.7812;InbreedingCoeff=0.2945;MQ=65.13;MQ0=36;MQRankSum=-2.884;QD=12.13;ReadPosRankSum=-1.711;VQSLOD=1.8373;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:40:92.69:0,93,1455	1/1:5,0:5:6.02:91,6,0	0/0:34,0:14:31.94:0,32,230	0/1:32,0:14:7.14:7,0,113	1/1:14,0:12:9.02:122,9,0	0/0:26,0:24:57.05:0,57,956	0/0:30,0:24:51.04:0,51,932	0/1:8,9:10:99:140,0,133	0/0:11,0:10:24.06:0,24,481	0/1:23,0:20:20.48:257,0,20	0/1:10,0:10:35.95:118,0,36	1/1:15,0:14:27:304,27,0	0/0:23,0:23:60.18:0,60,1775	0/0:24,0:24:53.91:0,54,1585	1/1:11,0:10:15.01:153,15,0	1/1:12,0:10:23.93:246,24,0	1/1:16,0:15:35.84:363,36,0	1/1:17,0:17:31.60:323,32,0	0/1:13,0:10:99:109,0,142	1/1:12,0:10:11.84:148,12,0	0/1:46,0:40:2.48:669,0,2	1/1:9,0:8:12.04:194,12,0	1/1:12,0:10:2.85:27,3,0	1/1:14,0:13:12.01:111,12,0	0/1:11,0:10:31.09:206,0,31	0/1:12,0:10:66.90:179,0,67	0/1:11,0:7:42.82:43,0,120	1/1:4,0:1:2.99:24,3,0
chr10	39685843	.	AGAGGTGAGAGCTGGG	A	2670.70	PASS	AB=0.936;AC=31;AF=0.646;AN=48;BaseQRankSum=2.598;DP=891;FS=3.528;HRun=0;HaplotypeScore=143.3044;InbreedingCoeff=0.4288;MQ=33.36;MQ0=177;MQRankSum=-1.649;QD=4.22;ReadPosRankSum=-0.335;VQSLOD=2.7522;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:15:15.05:0,15,249	0/0:11,0:2:2.96:0,3,19	./.	./.	0/0:34,0:13:0.94:0,1,2	1/1:21,0:12:11.97:170,12,0	1/1:25,0:18:5.09:95,5,0	0/0:39,0:15:0:0,0,0	1/1:15,0:12:18.06:278,18,0	0/1:42,13:32:75.08:195,0,75	0/0:21,0:10:0.47:0,0,1	1/1:33,0:16:21.06:259,21,0	0/0:9,0:8:2.83:0,3,52	0/0:16,0:13:15.05:0,15,223	0/1:25,0:18:87.43:156,0,87	1/1:32,0:15:9.03:128,9,0	1/1:49,0:32:9.49:98,9,0	1/1:50,0:32:16.94:234,17,0	./.	1/1:38,0:17:12.63:183,13,0	1/1:74,0:31:12.48:158,12,0	0/1:28,0:14:9.28:16,0,9	1/1:35,0:18:2.67:44,3,0	1/1:57,0:31:15.93:181,16,0	1/1:40,0:23:15.46:270,15,0	1/1:37,0:20:18.03:247,18,0	./.	1/1:19,0:9:8.96:105,9,0
chr10	39686271	.	GCAAAGAACTTCATGTTAGATC	G	12159.88	PASS	AB=0.600;AC=37;AF=0.685;AN=54;BaseQRankSum=13.519;DP=397;FS=16.058;HRun=0;HaplotypeScore=237.3586;InbreedingCoeff=0.7427;MQ=92.02;MQ0=0;MQRankSum=-13.012;QD=72.38;ReadPosRankSum=3.564;VQSLOD=3.1555;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,120,10400	1/1:0,8:8:9.03:524,9,0	0/0:18,0:18:46.92:0,47,2954	0/0:25,0:25:66.18:0,66,4312	1/1:1,11:12:15.05:873,15,0	0/0:32,0:32:96.30:0,96,8496	0/0:33,0:33:99:0,99,8569	1/1:11,0:11:20.64:129,21,0	0/0:25,0:25:72.22:0,72,6035	1/1:0,8:8:17.89:449,18,0	1/1:0,7:7:18.06:985,18,0	1/1:1,4:5:3.01:175,3,0	0/0:35,0:35:99:0,105,9966	0/0:21,0:21:57.20:0,57,4693	1/1:0,8:8:9.03:524,9,0	0/1:3,6:9:99:512,0,289	1/1:0,5:5:3.01:175,3,0	1/1:0,4:4:3.01:175,3,0	1/1:1,6:7:17.92:584,18,0	1/1:1,12:13:24.08:1261,24,0	1/1:0,1:1:3.01:175,3,0	1/1:0,10:10:18.06:1048,18,0	1/1:2,14:16:18.06:1046,18,0	1/1:2,8:10:8.95:365,9,0	1/1:1,21:22:42.14:2445,42,0	1/1:2,9:11:11.96:541,12,0	./.	1/1:0,1:1:3.01:175,3,0
chr10	39686455	.	T	TCCATGGCATCC	23676.71	PASS	AB=0.700;AC=39;AF=0.696;AN=56;BaseQRankSum=10.708;DP=581;FS=49.468;HRun=0;HaplotypeScore=241.0419;InbreedingCoeff=0.8427;MQ=80.92;MQ0=0;MQRankSum=-14.967;QD=70.05;ReadPosRankSum=-0.283;VQSLOD=2.6324;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,123,4015	1/1:6,1:7:6.02:258,6,0	0/0:21,0:21:30.08:0,30,692	0/0:30,0:30:63.16:0,63,1533	1/1:10,5:15:17.60:993,18,0	0/0:29,0:29:81.26:0,81,2566	0/0:41,0:41:99:0,99,2985	1/1:42,0:42:45.07:1785,45,0	0/0:25,0:25:51.17:0,51,1590	1/1:9,5:14:33.11:1496,33,0	1/1:3,3:6:9.03:424,9,0	1/1:5,10:15:36.12:1987,36,0	0/0:27,0:27:57.20:0,57,1872	0/0:22,0:22:51.17:0,51,1569	1/1:12,9:21:32.99:1339,33,0	0/1:12,9:21:63.99:1534,0,64	1/1:10,8:18:33.11:1750,33,0	1/1:10,4:14:13.19:1049,13,0	1/1:16,7:23:27.09:1397,27,0	1/1:2,3:5:3.01:166,3,0	1/1:12,9:20:21.07:1158,21,0	1/1:11,6:17:33.11:1677,33,0	1/1:6,4:10:15.05:827,15,0	1/1:13,8:21:12.51:663,13,0	1/1:13,6:19:30.06:1386,30,0	1/1:6,11:17:39.13:1772,39,0	1/1:16,6:22:30.10:1520,30,0	1/1:8,1:9:9.03:497,9,0
chr10	39686482	.	CT	C	4386.21	PASS	AB=0.510;AC=38;AF=0.679;AN=56;BaseQRankSum=17.104;DP=468;FS=50.482;HRun=1;HaplotypeScore=161.5632;InbreedingCoeff=0.8163;MQ=84.99;MQ0=0;MQRankSum=-17.315;QD=18.82;ReadPosRankSum=-2.185;VQSLOD=1.1966;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,157,2490	1/1:1,4:5:14.71:107,15,0	0/0:19,0:19:56.66:0,57,833	0/0:31,0:31:79.01:0,79,1197	0/1:0,11:11:0:0,0,1	0/0:27,0:27:81.28:0,81,1295	0/0:40,0:40:99:0,120,1872	1/1:0,21:21:59.88:485,60,0	0/0:22,0:22:63.21:0,63,1007	1/1:0,12:12:35.92:296,36,0	1/1:0,5:5:6.45:48,6,0	1/1:0,19:19:56.79:441,57,0	0/0:22,0:22:66.20:0,66,1030	0/0:22,0:22:66.23:0,66,1053	1/1:0,12:12:35.86:278,36,0	0/1:1,12:13:9.14:233,0,9	1/1:0,19:19:44.84:350,45,0	1/1:0,8:8:23.96:197,24,0	1/1:0,16:16:47.93:398,48,0	1/1:0,2:2:2.97:20,3,0	1/1:0,10:10:8.94:65,9,0	1/1:0,14:14:32.85:253,33,0	1/1:0,6:6:6.47:58,6,0	1/1:0,19:19:27.72:201,28,0	1/1:0,8:8:23.95:200,24,0	1/1:0,15:15:44.39:327,44,0	1/1:0,16:16:47.85:379,48,0	1/1:0,2:2:5.99:50,6,0
chr10	39686484	.	CTG	C	5568.13	PASS	AB=0.510;AC=36;AF=0.643;AN=56;BaseQRankSum=17.026;DP=464;FS=48.794;HRun=0;HaplotypeScore=163.4877;InbreedingCoeff=0.8023;MQ=83.24;MQ0=0;MQRankSum=-16.986;QD=24.00;ReadPosRankSum=-2.202;VQSLOD=2.7730;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,154,3103	1/1:0,5:5:15.02:148,15,0	0/0:19,0:19:56.77:0,57,1036	0/0:29,0:29:77.85:0,78,1424	0/1:0,11:11:0.03:0,0,0	0/0:27,0:27:81.24:0,81,1535	0/0:39,0:39:99:0,117,2327	1/1:0,21:21:60.14:623,60,0	0/0:22,0:22:63.20:0,63,1242	1/1:0,12:12:33.08:343,33,0	1/1:0,5:5:6.01:61,6,0	1/1:0,19:19:57.11:570,57,0	0/0:21,0:21:63.19:0,63,1205	0/0:22,0:22:66.23:0,66,1339	1/1:0,12:12:36.07:360,36,0	0/1:1,12:13:21.82:315,0,22	1/1:0,19:19:45.09:452,45,0	1/1:0,8:8:24.06:252,24,0	1/1:0,16:16:48.12:508,48,0	0/0:0,2:2:0:0,0,0	1/1:1,10:11:5.96:59,6,0	1/1:0,14:14:33.06:330,33,0	1/1:0,6:6:5.51:59,6,0	1/1:0,19:19:26.99:266,27,0	1/1:0,8:8:24.05:242,24,0	1/1:0,15:15:45.01:431,45,0	1/1:0,16:16:48.10:488,48,0	1/1:0,2:2:6.02:64,6,0
chr10	39686929	.	A	ATCTGAGCCC	37571.61	PASS	AB=0.595;AC=37;AF=0.661;AN=56;BaseQRankSum=11.422;DP=564;FS=1.448;HRun=0;HaplotypeScore=210.6359;InbreedingCoeff=0.9151;MQ=84.87;MQ0=0;MQRankSum=-18.075;QD=110.83;ReadPosRankSum=3.116;VQSLOD=5.4646;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,20:38:66.23:3300,66,0	0/0:14,0:14:39.13:0,39,1272	0/0:24,0:24:72.24:0,72,1893	0/0:27,0:27:76.27:0,76,2371	1/1:2,15:18:23.93:1208,24,0	0/0:23,0:23:69.24:0,69,2133	0/0:38,0:38:99:0,111,3243	1/1:18,6:25:72.15:2827,72,0	0/0:29,0:29:87.28:0,87,2653	0/0:27,0:27:78.26:0,78,2366	0/0:14,0:14:42.14:0,42,1364	1/1:4,14:19:54.19:2721,54,0	1/1:4,13:19:51.17:2433,51,0	1/1:2,17:22:57.20:2859,57,0	1/1:3,9:15:36.03:1552,36,0	1/1:4,10:15:42.14:2008,42,0	1/1:7,12:21:45.15:2263,45,0	0/0:29,0:29:87.20:0,87,2470	1/1:4,6:11:33.10:1437,33,0	1/1:2,4:7:15.05:755,15,0	1/1:3,8:13:18.06:908,18,0	1/1:3,7:10:18.06:907,18,0	1/1:3,15:18:54.19:2722,54,0	1/1:5,11:19:42.14:2117,42,0	1/1:7,6:15:30.01:1138,30,0	0/1:7,13:22:34.72:2474,0,35	1/1:6,11:20:54.10:2431,54,0	1/1:3,6:12:30.10:1510,30,0
chr10	39687300	.	G	GA	13097.80	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-13.741;DP=577;FS=5.365;HRun=1;HaplotypeScore=51.9599;InbreedingCoeff=0.9985;MQ=75.93;MQ0=1;MQRankSum=-0.855;QD=39.93;ReadPosRankSum=0.832;VQSLOD=5.3050;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,108,1387	1/1:0,11:11:30.10:449,30,0	0/0:8,0:8:18.06:0,18,233	0/0:13,0:13:30.06:0,30,371	1/1:1,13:14:36.12:538,36,0	0/0:15,0:15:42.14:0,42,545	0/0:32,0:32:96.26:0,96,1190	1/1:0,27:27:75.18:1057,75,0	0/0:25,0:25:75.24:0,75,974	1/1:1,18:19:54.17:785,54,0	1/1:1,9:10:30.10:440,30,0	0/0:27,0:27:78.25:0,78,1012	0/0:19,0:19:57.19:0,57,740	0/0:23,0:23:69.22:0,69,895	1/1:0,22:22:60.20:898,60,0	1/1:1,17:18:48.16:719,48,0	1/1:2,32:34:84.28:1253,84,0	1/1:1,23:24:66.22:989,66,0	1/1:3,15:18:51.10:715,51,0	1/1:0,13:13:33.11:493,33,0	1/1:4,38:41:99:1661,111,0	1/1:0,16:16:39.13:584,39,0	0/0:15,0:15:39.13:0,39,506	0/0:34,0:34:96.29:0,96,1231	1/1:0,14:14:42.14:629,42,0	1/1:1,16:17:48.16:717,48,0	1/1:0,18:18:48.16:719,48,0	1/1:1,10:11:30.10:449,30,0
chr10	39688261	.	C	CA	5224.66	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-4.419;DP=733;FS=0.750;HRun=2;HaplotypeScore=71.9569;InbreedingCoeff=0.9983;MQ=85.51;MQ0=0;MQRankSum=-0.181;QD=38.14;ReadPosRankSum=2.938;VQSLOD=5.5175;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,111,1374	0/0:8,0:8:24.06:0,24,285	0/0:28,0:28:71.95:0,72,852	0/0:23,0:23:56.55:0,57,695	0/0:23,0:23:66.19:0,66,804	1/1:2,26:28:72.24:1036,72,0	1/1:2,23:25:59.87:864,60,0	0/0:33,0:33:96.29:0,96,1178	1/1:1,22:23:63.21:907,63,0	0/0:24,0:24:69.21:0,69,844	0/0:9,0:9:21.07:0,21,260	0/0:40,0:40:99:0,108,1325	1/1:0,35:35:99:1425,99,0	1/1:0,25:26:69.23:992,69,0	0/0:31,0:31:93.24:0,93,1112	0/0:19,0:19:57.18:0,57,707	0/0:49,0:49:99:0,141,1747	0/0:35,0:35:99:0,102,1250	0/0:17,0:17:48.15:0,48,595	0/0:25,0:25:69.19:0,69,829	0/0:44,0:44:99:0,123,1511	0/0:24,0:24:66.18:0,66,792	0/0:17,0:17:48.15:0,48,594	0/0:33,0:33:96.30:0,96,1189	0/0:24,0:24:72.23:0,72,893	0/0:21,0:21:54.16:0,54,659	0/0:23,0:23:69.22:0,69,855	0/0:9,0:9:27.08:0,27,335
chr10	39688634	.	A	AC	4572.61	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=1.077;DP=718;FS=3.405;HRun=1;HaplotypeScore=74.0074;InbreedingCoeff=0.9979;MQ=83.39;MQ0=0;MQRankSum=-1.180;QD=41.95;ReadPosRankSum=1.855;VQSLOD=5.3912;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,129,1612	0/0:12,0:12:36.12:0,36,467	0/0:24,0:25:29.93:0,30,621	0/0:19,0:20:47.57:0,48,587	0/0:34,0:34:93.25:0,93,1174	1/1:0,20:20:57.19:852,57,0	1/1:0,25:25:66.22:988,66,0	0/0:33,0:33:84.24:0,84,1033	1/1:1,14:15:39.13:583,39,0	0/0:28,0:28:64.25:0,64,940	0/0:15,0:15:45.15:0,45,584	0/0:34,0:34:99:0,99,1257	1/1:0,20:20:60.20:891,60,0	1/1:1,28:29:84.28:1258,84,0	0/0:26,0:26:75.23:0,75,959	0/0:34,0:34:99:0,99,1252	0/0:27,0:27:81.23:0,81,1020	0/0:23,0:23:69.22:0,69,895	0/0:13,0:13:33.08:0,33,400	0/0:26,0:26:78.25:0,78,1012	0/0:46,0:46:99:0,138,1736	0/0:28,0:28:84.27:0,84,1078	0/0:27,0:27:72.19:0,72,915	0/0:34,0:34:96.28:0,96,1218	0/0:19,0:19:54.15:0,54,663	0/0:26,0:26:78.24:0,78,988	0/0:28,0:27:81.21:0,81,1017	0/0:6,0:6:18.06:0,18,234
chr10	39688838	.	AAAATTTCC	A	4053.98	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.429;DP=624;FS=1.157;HRun=0;HaplotypeScore=246.0283;InbreedingCoeff=0.9991;MQ=77.26;MQ0=0;MQRankSum=-10.770;QD=75.07;ReadPosRankSum=-1.023;VQSLOD=3.3349;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:93.32:0,93,3958	0/0:11,0:11:33.11:0,33,1450	0/0:17,0:17:51.15:0,51,1832	0/0:15,0:15:38.78:0,39,1243	0/0:35,0:35:99:0,105,4562	1/1:3,15:18:45.11:1177,45,0	1/1:2,14:15:42.14:1170,42,0	0/0:37,0:37:99:0,108,4432	1/1:0,20:20:60.21:1707,60,0	0/0:36,0:36:99:0,108,4743	0/0:22,0:22:66.23:0,66,2951	0/0:31,0:31:93.28:0,93,3917	0/0:12,0:12:36.12:0,36,1598	0/0:18,0:18:54.19:0,54,2250	0/0:26,0:26:78.27:0,78,3444	0/0:19,0:18:51.18:0,51,2309	0/0:22,0:21:66.23:0,66,2888	0/0:25,0:25:75.26:0,75,3267	0/0:20,0:20:57.20:0,57,2109	0/0:34,0:34:99:0,102,4410	0/0:17,0:17:45.14:0,45,1792	0/0:21,0:21:63.20:0,63,2592	0/0:18,0:18:54.19:0,54,2272	0/0:16,0:16:42.14:0,42,1723	0/0:25,0:25:75.26:0,75,3264	0/0:34,0:34:99:0,99,4297	0/0:19,0:19:57.20:0,57,2321	0/0:9,0:9:24.08:0,24,1051
chr10	39688884	.	AC	A	23655.67	PASS	AB=0.706;AC=54;AF=0.964;AN=56;BaseQRankSum=-2.838;DP=610;FS=4.420;HRun=1;HaplotypeScore=101.1137;InbreedingCoeff=-0.0307;MQ=65.54;MQ0=0;MQRankSum=-3.406;QD=38.78;ReadPosRankSum=2.442;VQSLOD=5.1778;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,26:27:81.23:1110,81,0	1/1:1,9:10:30.07:399,30,0	0/1:4,5:9:3.60:114,0,4	0/1:7,2:10:15.20:105,0,15	1/1:1,37:38:99:1520,114,0	1/1:3,19:22:63.21:877,63,0	1/1:2,16:17:48.16:667,48,0	1/1:0,36:36:99:1391,105,0	1/1:0,17:17:51.17:708,51,0	1/1:3,34:37:99:1489,108,0	1/1:5,17:22:66.16:865,66,0	1/1:0,23:23:69.23:961,69,0	1/1:1,17:18:51.14:685,51,0	1/1:1,16:17:48.15:655,48,0	1/1:1,22:23:69.22:946,69,0	1/1:3,15:18:54.17:739,54,0	1/1:1,20:21:57.19:792,57,0	1/1:1,15:16:45.14:613,45,0	1/1:2,23:25:72.19:957,72,0	1/1:2,34:36:99:1484,108,0	1/1:2,18:20:57.14:744,57,0	1/1:1,21:22:66.11:893,66,0	1/1:1,22:23:60.19:819,60,0	1/1:1,17:18:54.17:735,54,0	1/1:1,25:26:75.25:1044,75,0	1/1:1,32:33:99:1380,99,0	1/1:3,13:16:45.10:590,45,0	1/1:0,9:9:27.09:374,27,0
chr10	39689120	.	T	TA	4353.25	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-12.523;DP=571;FS=1.642;HRun=1;HaplotypeScore=105.6902;InbreedingCoeff=0.9536;MQ=68.06;MQ0=0;MQRankSum=-3.063;QD=23.66;ReadPosRankSum=-2.245;VQSLOD=4.2659;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:74.78:0,75,403	0/0:7,0:7:20.21:0,20,112	0/0:10,0:10:27.04:0,27,312	0/0:4,0:4:7.58:0,8,66	0/0:28,0:28:71.43:0,71,362	0/0:15,0:15:38.76:0,39,215	0/0:17,0:17:21.50:0,21,189	1/1:7,24:31:48.91:744,49,0	0/0:21,0:21:25.34:0,25,252	0/0:37,0:36:71.84:0,72,444	0/0:22,0:22:56.35:0,56,285	0/0:23,1:24:2.83:0,3,253	0/0:22,0:22:60.92:0,61,324	0/0:25,0:25:60.03:0,60,306	0/0:20,0:20:40.72:0,41,198	0/0:21,0:21:53.73:0,54,270	0/0:29,0:29:71.84:0,72,373	0/0:15,0:15:39.86:0,40,212	1/1:5,18:23:39.95:514,40,0	1/1:1,15:16:23.65:369,24,0	1/1:2,9:11:21.06:240,21,0	0/0:19,0:19:45.30:0,45,226	0/0:8,0:8:22.97:0,23,117	0/0:15,0:15:20.40:0,20,173	1/1:4,31:35:78.09:868,78,0	1/1:8,17:25:49.57:655,50,0	1/1:7,25:31:53.63:622,54,0	1/1:1,10:11:30.09:342,30,0
chr10	39689390	.	C	CT	815.17	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=1.717;DP=707;FS=4.160;HRun=9;HaplotypeScore=82.9867;InbreedingCoeff=0.9842;MQ=77.77;MQ0=1;MQRankSum=0.425;QD=18.96;ReadPosRankSum=0.319;VQSLOD=3.9604;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:80.95:0,81,698	0/0:12,0:12:29.99:0,30,260	0/0:35,0:28:45.46:0,45,414	0/0:33,0:25:12.20:0,12,148	0/0:24,0:24:62.98:0,63,547	0/0:20,0:20:53.98:0,54,469	0/0:18,0:18:44.99:0,45,391	0/0:32,0:32:74.95:0,75,646	0/0:21,0:21:47.95:0,48,412	0/0:38,0:38:98.97:0,99,858	0/0:23,0:23:59.98:0,60,520	0/0:27,0:27:71.95:0,72,618	1/1:3,25:28:33.85:605,34,0	1/1:2,13:15:30.08:332,30,0	0/0:27,0:27:71.96:0,72,625	0/0:18,0:18:47.97:0,48,413	0/0:35,0:35:54.06:0,54,664	0/0:16,0:16:38.98:0,39,339	0/0:18,0:18:41.98:0,42,362	0/0:24,0:24:62.97:0,63,545	0/0:38,1:39:71.78:0,72,852	0/0:26,0:26:47.60:0,48,573	0/0:22,0:22:56.96:0,57,490	0/0:24,0:24:68.97:0,69,595	0/0:26,0:26:59.96:0,60,518	0/0:21,0:21:56.97:0,57,490	0/0:36,0:36:86.91:0,87,744	0/0:17,0:17:50.99:0,51,443
chr10	39690835	.	CT	C	4195.07	PASS	AB=0.827;AC=54;AF=0.964;AN=56;BaseQRankSum=1.172;DP=670;FS=90.727;HRun=2;HaplotypeScore=189.6641;InbreedingCoeff=0.0073;MQ=79.45;MQ0=0;MQRankSum=6.483;QD=6.26;ReadPosRankSum=3.389;VQSLOD=-0.5310;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:49,0:49:37.23:239,37,0	1/1:2,0:2:3.63:10,4,0	0/1:16,3:19:21.92:22,0,60	0/1:11,4:15:30.99:31,0,51	1/1:24,0:24:21.82:102,22,0	1/1:16,0:16:19.10:99,19,0	1/1:26,0:26:21.64:142,22,0	1/1:26,0:26:25.91:168,26,0	1/1:20,0:20:46.90:208,47,0	1/1:24,0:24:50.01:284,50,0	1/1:6,0:6:13.39:73,13,0	1/1:24,0:24:48.86:217,49,0	1/1:33,1:34:56.46:273,56,0	1/1:30,0:30:19.43:153,19,0	1/1:31,0:31:53.92:253,54,0	1/1:29,0:29:38.61:165,39,0	1/1:27,0:27:12.80:89,13,0	1/1:31,0:31:45.61:177,46,0	1/1:23,0:23:14.89:137,15,0	1/1:25,0:25:46.89:161,47,0	1/1:40,0:40:46.61:272,47,0	1/1:17,0:17:38.59:180,39,0	1/1:11,0:11:21.63:84,22,0	1/1:31,0:31:17.34:118,17,0	1/1:28,0:28:53.44:180,53,0	1/1:24,0:24:31.37:167,31,0	1/1:29,0:29:35.61:145,36,0	1/1:9,0:9:14.06:46,14,0
chr10	39690839	.	C	CA	7645.66	PASS	AB=0.863;AC=54;AF=0.964;AN=56;BaseQRankSum=-3.024;DP=672;FS=18.403;HRun=1;HaplotypeScore=191.4074;InbreedingCoeff=-0.0174;MQ=76.52;MQ0=0;MQRankSum=3.288;QD=11.38;ReadPosRankSum=1.360;VQSLOD=1.7604;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:49,0:49:94.27:474,94,0	1/1:4,0:4:8.31:41,8,0	0/1:14,3:17:41.71:42,0,48	0/1:12,2:14:15.95:16,0,35	1/1:24,0:24:50.88:233,51,0	1/1:15,0:15:31.45:159,31,0	1/1:29,0:29:61.02:363,61,0	1/1:27,0:27:56.08:388,56,0	1/1:20,0:20:56.32:282,56,0	1/1:23,0:23:59.57:370,60,0	1/1:6,0:6:13.76:64,14,0	1/1:25,0:25:59.20:289,59,0	1/1:32,0:32:74.85:413,75,0	1/1:28,0:28:51.91:268,52,0	1/1:32,0:32:78.87:425,79,0	1/1:29,0:29:68.19:442,68,0	1/1:28,0:28:57.65:322,58,0	1/1:33,0:33:73.79:348,74,0	1/1:22,0:22:33.18:249,33,0	1/1:22,0:22:60.01:267,60,0	1/1:36,0:36:75.83:366,76,0	1/1:19,0:19:48.03:245,48,0	1/1:11,0:11:27.70:131,28,0	1/1:33,0:33:50.11:274,50,0	1/1:32,0:32:83.05:433,83,0	1/1:24,0:24:54.85:280,55,0	1/1:30,0:30:67.89:346,68,0	1/1:8,0:8:22.25:113,22,0
chr10	39693777	.	ACT	A	3666.82	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=11.617;DP=682;FS=1.950;HRun=0;HaplotypeScore=78.2438;InbreedingCoeff=0.9751;MQ=93.33;MQ0=1;MQRankSum=-2.570;QD=34.92;ReadPosRankSum=2.298;VQSLOD=5.7519;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,138,2540	0/0:7,0:7:21.07:0,21,386	0/0:38,0:38:99:0,105,1849	0/0:35,0:33:81.28:0,81,1451	0/0:31,0:31:93.31:0,93,1694	1/1:1,19:19:48.16:707,48,0	1/1:3,23:26:63.21:928,63,0	0/0:33,0:33:96.31:0,96,1744	1/1:0,21:21:54.18:795,54,0	0/0:28,0:28:84.28:0,84,1537	0/0:20,0:20:57.20:0,57,1067	0/0:29,0:29:81.28:0,81,1509	1/1:0,14:14:36.12:530,36,0	1/1:0,24:24:48.16:707,48,0	0/0:22,0:22:66.23:0,66,1236	0/0:21,0:21:63.22:0,63,1165	0/0:32,0:32:96.31:0,96,1743	0/0:22,0:22:63.22:0,63,1179	0/0:26,0:26:75.26:0,75,1365	0/0:23,0:23:66.23:0,66,1236	0/0:35,0:35:99:0,102,1851	0/0:17,0:17:51.17:0,51,955	0/0:16,0:16:45.15:0,45,830	0/0:25,0:25:75.26:0,75,1387	0/0:20,0:18:60.19:0,60,1079	0/0:31,0:31:93.30:0,93,1684	0/0:18,0:18:51.17:0,51,954	0/0:2,0:2:6.02:0,6,112
chr10	39694788	.	GTGC	G	809.05	PASS	AB=0.855;AC=12;AF=0.214;AN=56;BaseQRankSum=14.460;DP=851;FS=71.396;HRun=0;HaplotypeScore=337.4951;InbreedingCoeff=-0.2816;MQ=47.88;MQ0=2;MQRankSum=-10.854;QD=1.93;ReadPosRankSum=2.133;VQSLOD=-0.3270;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:33.40:0,33,691	0/1:8,3:11:0.97:1,0,164	0/0:37,0:31:84.01:0,84,1657	0/0:31,0:27:38.44:0,38,1243	0/0:28,9:37:15.05:0,15,295	0/0:19,6:25:3.50:0,3,434	0/1:29,1:30:26.44:26,0,411	0/1:34,2:36:1.52:2,0,1244	0/0:17,5:22:5.83:0,6,368	0/1:55,14:69:99:388,0,1545	0/0:22,2:24:8.49:0,8,207	0/1:23,6:29:21.69:22,0,338	0/0:24,2:26:26.04:0,26,842	0/0:20,5:24:26.19:0,26,694	0/0:27,7:34:45.12:0,45,882	0/0:32,5:37:1.25:0,1,813	0/0:14,0:14:17.12:0,17,257	0/0:11,1:12:12.27:0,12,537	0/1:16,1:17:14.98:15,0,722	0/1:23,15:38:5.71:6,0,381	0/0:30,0:29:43.38:0,43,1008	0/1:47,5:52:8.18:8,0,298	0/0:25,11:36:2.66:0,3,71	0/0:20,0:20:15.52:0,16,312	0/1:56,3:59:20.43:20,0,706	0/1:30,10:40:99:322,0,1174	0/1:17,10:27:99:107,0,624	0/1:9,2:11:27.86:28,0,511
chr10	39694796	.	G	GTA	735.62	PASS	AB=0.818;AC=12;AF=0.214;AN=56;BaseQRankSum=12.173;DP=677;FS=29.067;HRun=0;HaplotypeScore=251.1531;InbreedingCoeff=-0.2916;MQ=45.80;MQ0=1;MQRankSum=-9.962;QD=2.35;ReadPosRankSum=4.241;VQSLOD=1.1969;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:29.51:0,30,303	0/1:7,3:10:2.22:2,0,83	0/0:27,0:21:53.62:0,54,684	0/0:22,0:19:44.16:0,44,607	0/0:14,9:24:5.20:0,5,60	0/0:13,6:19:5.90:0,6,117	0/0:24,1:25:1.72:0,2,209	0/1:24,4:28:82.11:82,0,525	0/0:13,5:18:9.54:0,10,119	0/1:39,14:53:99:330,0,826	0/0:14,2:16:9.01:0,9,138	0/1:17,7:24:8.91:9,0,128	0/0:18,6:24:35.72:0,36,398	0/0:18,6:23:25.92:0,26,290	0/0:16,10:26:12.18:0,12,297	0/1:23,8:31:4.14:4,0,416	0/1:10,0:10:33.52:34,0,68	0/0:11,1:12:17.45:0,17,307	0/1:11,1:12:5.97:6,0,340	0/1:16,15:31:2.67:3,0,160	0/0:25,1:26:33.36:0,33,426	0/0:30,5:35:1.27:0,1,99	0/0:17,11:28:2.57:0,3,46	0/0:17,1:18:12.04:0,12,184	0/1:44,3:47:20.26:20,0,284	0/1:23,11:34:99:245,0,708	0/1:14,10:24:96.53:97,0,255	0/1:7,2:9:37.92:38,0,151
chr10	39695594	.	T	TA	2586.14	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-7.272;DP=655;FS=7.659;HRun=6;HaplotypeScore=69.6709;InbreedingCoeff=0.9995;MQ=75.61;MQ0=0;MQRankSum=-0.429;QD=28.42;ReadPosRankSum=1.047;VQSLOD=4.2579;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,129,1289	1/1:0,15:15:39.12:490,39,0	0/0:22,0:22:42.33:0,42,374	0/0:13,0:13:26.42:0,26,249	0/0:22,0:22:60.06:0,60,591	0/0:24,0:24:63.13:0,63,638	0/0:19,0:19:51.08:0,51,506	0/0:25,0:25:57.12:0,57,576	0/0:26,0:26:69.15:0,69,704	1/1:5,29:34:81.21:977,81,0	1/1:1,19:20:54.17:676,54,0	0/0:23,0:23:57.11:0,57,576	0/0:19,0:19:57.13:0,57,581	0/0:25,0:25:72.15:0,72,727	0/0:28,0:28:72.14:0,72,727	0/0:27,0:27:63.13:0,63,643	0/0:26,0:26:69.13:0,69,696	1/1:2,20:22:48.15:604,48,0	0/0:22,0:22:57.08:0,57,560	0/0:20,0:20:57.13:0,57,580	0/0:28,0:28:72.12:0,72,719	0/0:20,0:20:60.12:0,60,605	0/0:20,0:20:59.95:0,60,574	0/0:28,0:28:78.17:0,78,794	0/0:24,0:24:69.16:0,69,703	0/0:32,0:32:96.22:0,96,979	0/0:16,0:16:36.07:0,36,366	0/0:10,0:10:30.07:0,30,306
chr10	39696663	.	CCATCCATG	C	2876.69	PASS	AB=0.933;AC=21;AF=0.375;AN=56;BaseQRankSum=0.846;DP=777;FS=10.827;HRun=0;HaplotypeScore=229.6732;InbreedingCoeff=0.8294;MQ=72.26;MQ0=3;MQRankSum=-6.511;QD=11.46;ReadPosRankSum=0.975;VQSLOD=1.3695;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:33.05:0,33,1139	1/1:8,4:10:17.98:291,18,0	0/0:27,0:26:0.42:0,0,23	0/0:40,0:36:18.13:0,18,152	0/0:27,0:27:32.76:0,33,1218	0/0:21,0:19:36.09:0,36,1174	0/0:24,0:24:42.10:0,42,1381	1/1:27,0:25:23.98:252,24,0	0/0:39,0:34:54.09:0,54,1471	0/1:26,2:27:28.82:338,0,29	1/1:18,4:21:21.04:281,21,0	0/0:36,0:36:69.17:0,69,2429	0/0:52,0:48:71.97:0,72,2901	0/0:43,0:38:57.20:0,57,2237	0/0:52,0:51:84.14:0,84,2877	0/0:36,0:36:69.20:0,69,2368	0/0:19,0:19:36:0,36,1172	1/1:4,2:6:9.01:174,9,0	1/1:18,0:17:7.19:67,7,0	1/1:26,2:27:10.04:159,10,0	1/1:39,2:38:21.89:283,22,0	0/0:31,0:31:54.10:0,54,1861	0/0:24,0:24:42.56:0,43,1369	0/0:23,0:22:24.07:0,24,868	1/1:24,6:30:27.46:603,27,0	1/1:23,3:23:21.43:318,21,0	1/1:9,4:12:15.03:320,15,0	0/0:6,0:6:2.60:0,3,10
chr10	39696719	.	CCATA	C	3954.33	PASS	AB=0.714;AC=39;AF=0.750;AN=52;BaseQRankSum=1.514;DP=709;FS=5.502;HRun=0;HaplotypeScore=277.4763;InbreedingCoeff=0.7529;MQ=45.23;MQ0=7;MQRankSum=-2.840;QD=8.26;ReadPosRankSum=0.068;VQSLOD=2.2086;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:20:9.05:49,9,0	1/1:6,5:10:15.05:216,15,0	0/0:34,0:20:6.02:0,6,91	./.	0/0:30,0:30:28.68:0,29,198	1/1:14,0:12:11.82:118,12,0	1/1:25,0:25:4.12:34,4,0	1/1:25,0:24:0.23:1,0,0	1/1:30,0:24:28.94:244,29,0	1/1:17,13:29:60:861,60,0	1/1:8,12:20:32.61:425,33,0	1/1:35,0:34:47.18:578,47,0	1/1:41,0:37:29.62:225,30,0	1/1:31,0:27:12.09:85,12,0	0/0:53,0:52:65.77:0,66,779	0/0:48,0:46:39.04:0,39,463	0/0:16,0:16:17.87:0,18,158	0/1:9,6:14:1.94:173,0,2	1/1:18,0:16:2.80:13,3,0	1/1:11,0:11:2.90:18,3,0	1/1:51,0:48:9.84:76,10,0	0/0:26,0:26:22.38:0,22,154	1/1:26,0:26:21:241,21,0	1/1:25,0:23:14.78:220,15,0	1/1:19,0:19:18.22:108,18,0	1/1:18,0:18:15.50:167,15,0	1/1:14,0:12:11.99:104,12,0	./.
chr10	39696742	.	TACA	T	155.32	PASS	AB=0.889;AC=13;AF=0.241;AN=54;BaseQRankSum=4.548;DP=703;FS=5.865;HRun=0;HaplotypeScore=299.6282;InbreedingCoeff=-0.2985;MQ=41.06;MQ0=12;MQRankSum=-2.940;QD=0.51;ReadPosRankSum=8.380;VQSLOD=0.9418;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:18,2:19:19.83:0,20,250	0/1:8,0:9:13.07:13,0,31	0/0:34,0:19:43.27:0,43,667	0/0:35,0:16:40.98:0,41,467	0/0:28,0:28:42.04:0,42,714	0/1:7,3:10:45.03:45,0,93	0/1:17,4:21:5.36:5,0,308	0/0:29,0:25:69.64:0,70,859	0/1:20,10:24:34.48:34,0,286	0/1:39,0:37:44.86:45,0,562	0/1:17,0:18:23.08:23,0,67	0/0:33,0:32:12.48:0,12,467	0/1:31,6:35:25.10:25,0,454	0/1:17,8:23:7.38:7,0,409	0/0:57,0:57:99:0,108,2044	0/0:46,0:44:97.94:0,98,1590	0/0:17,0:17:30.07:0,30,530	0/1:14,0:12:13.33:13,0,114	0/0:14,0:13:26.39:0,26,280	0/0:12,0:12:33.03:0,33,348	0/1:43,0:44:4.36:4,0,399	0/0:27,0:27:42.14:0,42,698	0/0:23,0:23:32.60:0,33,360	0/0:23,0:21:4.75:0,5,281	0/1:13,0:16:7.53:8,0,184	0/1:21,0:22:48.68:49,0,309	0/1:15,0:13:27.17:27,0,93	./.
chr10	39696746	.	TACATACATA	T	3543.10	PASS	AB=0.874;AC=17;AF=0.315;AN=54;BaseQRankSum=6.443;DP=718;FS=10.874;HRun=0;HaplotypeScore=349.6825;InbreedingCoeff=-0.3724;MQ=40.89;MQ0=11;MQRankSum=-7.367;QD=7.51;ReadPosRankSum=-1.442;VQSLOD=0.6868;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:18,2:20:70.02:187,0,70	0/0:9,0:9:17.78:0,18,324	0/0:33,0:20:55.71:0,56,886	0/0:37,0:18:43.02:0,43,606	0/1:27,0:27:27.88:28,0,992	0/1:7,3:9:1.82:227,0,2	0/1:18,4:22:64.81:115,0,65	0/0:28,0:24:31.46:0,31,271	0/1:20,9:24:69.12:436,0,69	0/0:40,0:38:92.11:0,92,1943	0/0:16,0:16:36.12:0,36,660	0/1:33,0:32:25.47:25,0,711	0/1:32,6:37:76.06:651,0,76	0/1:21,8:27:56.10:475,0,56	0/1:58,0:58:38.92:39,0,2653	0/1:46,0:45:99:130,0,2194	0/0:18,0:18:29.79:0,30,640	0/0:14,0:12:24.08:0,24,388	0/1:13,0:12:41.65:42,0,119	0/1:7,0:11:17.42:75,0,17	0/1:46,0:45:99:176,0,100	0/1:27,0:27:82.78:83,0,967	0/0:23,0:23:15.08:0,15,569	0/0:26,0:24:23.33:0,23,421	0/1:10,0:15:11.83:212,0,12	0/1:17,0:22:99:414,0,132	0/1:12,0:16:5.43:229,0,5	./.
chr10	39696750	.	TACATA	T	2161.48	PASS	AB=0.929;AC=20;AF=0.370;AN=54;BaseQRankSum=6.407;DP=723;FS=50.944;HRun=0;HaplotypeScore=314.0028;InbreedingCoeff=-0.3846;MQ=41.47;MQ0=11;MQRankSum=-8.127;QD=4.23;ReadPosRankSum=-1.911;VQSLOD=0.6616;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:20,0:18:63.40:63,0,83	0/0:9,0:9:9.39:0,9,67	0/0:34,0:19:52.72:0,53,835	0/0:47,0:23:60.19:0,60,815	0/1:28,0:28:45.34:45,0,666	0/1:10,0:9:10.58:106,0,11	0/1:19,0:19:39.70:40,0,114	0/0:25,0:20:40.95:0,41,280	0/1:30,0:24:99:115,0,117	0/0:43,0:41:56.37:0,56,904	0/0:16,0:16:21.94:0,22,153	0/1:23,0:33:99:227,0,139	0/1:35,0:33:99:240,0,165	0/1:29,0:27:99:104,0,194	0/1:58,0:58:99:119,0,1876	0/1:46,0:45:99:100,0,1401	0/0:19,0:19:32.81:0,33,508	0/0:17,0:15:19.95:0,20,271	0/1:12,0:11:33.64:34,0,87	0/1:6,4:10:23.02:41,0,23	0/1:45,2:45:87.04:145,0,87	0/1:25,0:25:85.84:86,0,629	0/1:17,0:22:27.62:86,0,28	0/1:25,0:24:71.67:103,0,72	1/1:11,5:16:12.50:208,12,0	0/1:17,3:21:99:287,0,131	0/1:12,5:16:0.97:174,0,1	./.
chr10	39696774	.	TC	T	1297.04	PASS	AB=0.650;AC=5;AF=0.089;AN=56;BaseQRankSum=3.552;DP=859;FS=13.126;HRun=2;HaplotypeScore=281.5744;InbreedingCoeff=0.6000;MQ=43.27;MQ0=7;MQRankSum=-3.103;QD=21.62;ReadPosRankSum=0.100;VQSLOD=0.0679;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:21:25.24:0,25,474	0/0:9,0:9:21.96:0,22,310	0/0:52,1:25:69.23:0,69,1007	0/0:60,0:40:99:0,108,1481	0/0:27,0:27:50.87:0,51,675	0/1:6,7:10:20.44:219,0,20	1/1:5,14:18:3.01:319,3,0	0/0:35,2:25:71.25:0,71,980	1/1:3,25:26:48.99:877,49,0	0/0:51,0:48:99:0,132,1890	0/0:21,0:21:60.19:0,60,871	0/0:39,0:38:92.29:0,92,1253	0/0:44,0:43:86.74:0,87,1439	0/0:30,0:29:62.66:0,63,892	0/0:58,0:58:99:0,165,2408	0/0:51,0:50:99:0,117,1573	0/0:27,0:27:47.82:0,48,688	0/0:22,0:21:54.13:0,54,773	0/0:27,0:19:6.13:0,6,554	0/0:15,0:15:32.90:0,33,395	0/0:56,0:51:15.43:0,15,498	0/0:29,0:29:84.21:0,84,1147	0/0:18,0:18:42.14:0,42,625	0/0:32,0:31:52.38:0,52,705	0/0:14,1:15:16.65:0,17,266	0/0:29,0:29:40.30:0,40,800	0/0:24,0:23:9.01:0,9,462	0/0:3,0:3:5.60:0,6,26
chr10	39696843	.	TCATC	T	2951.91	PASS	AB=0.925;AC=22;AF=0.393;AN=56;BaseQRankSum=-1.627;DP=1090;FS=15.623;HRun=0;HaplotypeScore=251.2287;InbreedingCoeff=-0.3487;MQ=37.80;MQ0=61;MQRankSum=3.188;QD=3.76;ReadPosRankSum=4.903;VQSLOD=1.0317;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:19:16.33:16,0,87	0/1:19,1:13:19.91:20,0,348	0/0:34,0:9:1.82:0,2,5	0/0:25,0:11:3.01:0,3,43	0/1:22,0:18:3.37:7,0,3	0/1:12,0:10:57.16:57,0,266	0/0:22,1:20:24.07:0,24,500	0/0:81,0:73:7.57:0,8,405	0/0:33,0:26:12.65:0,13,483	0/1:95,1:91:13.76:14,0,2335	0/0:37,0:32:15.66:0,16,215	0/1:16,23:39:99:847,0,185	0/1:50,0:48:16.52:17,0,522	0/1:29,0:25:0.04:0,0,302	0/1:24,0:44:99:197,0,155	0/1:21,0:39:99:100,0,505	0/1:14,0:27:20.29:20,0,70	0/0:29,0:27:3.29:0,3,449	0/1:33,0:22:31.68:32,0,157	0/1:41,0:36:77.75:78,0,200	0/1:53,0:46:15.41:15,0,223	0/0:17,0:31:7.54:0,8,58	1/1:12,19:28:32.23:527,32,0	1/1:22,32:54:35.10:847,35,0	0/1:54,0:48:99:124,0,219	0/1:56,0:47:99:107,0,246	0/1:23,0:18:21.22:21,0,426	0/1:12,0:9:63.25:63,0,63
chr10	39696851	.	C	CCAT	2072.13	PASS	AB=0.956;AC=15;AF=0.268;AN=56;BaseQRankSum=3.641;DP=1061;FS=72.817;HRun=0;HaplotypeScore=237.7944;InbreedingCoeff=-0.3801;MQ=36.37;MQ0=69;MQRankSum=-3.046;QD=3.62;ReadPosRankSum=-1.791;VQSLOD=-0.4779;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:20:25.66:0,26,302	0/1:22,0:15:9.81:10,0,311	0/0:23,0:6:1.80:0,2,72	0/0:18,0:7:11.80:0,12,122	0/1:18,4:19:53.07:53,0,192	0/1:14,0:10:6.72:7,0,240	0/0:23,0:19:27.04:0,27,405	0/1:93,0:73:99:207,0,1007	0/1:34,0:26:39.57:40,0,575	0/0:99,0:86:99:0,163,2918	0/1:43,0:36:6.89:7,0,257	0/0:36,0:36:87:0,87,904	0/1:46,5:45:99:966,0,208	0/1:15,17:23:67.85:392,0,68	0/1:39,0:38:99:175,0,452	0/0:40,0:37:7.87:0,8,663	0/0:24,0:24:4.83:0,5,154	0/0:29,0:27:42.19:0,42,809	0/0:35,0:22:50.55:0,51,527	0/1:42,0:35:29.95:30,0,336	0/0:55,0:46:18.73:0,19,294	0/1:30,0:29:35.58:36,0,234	0/0:30,0:27:52.77:0,53,485	0/0:52,0:50:79:0,79,765	0/1:56,0:49:99:144,0,353	0/1:63,0:48:87.15:87,0,931	0/1:18,1:13:39.77:40,0,313	0/1:12,0:8:32.39:32,0,66
chr10	39696854	.	TC	T	603.53	PASS	AB=0.916;AC=7;AF=0.125;AN=56;BaseQRankSum=5.203;DP=1053;FS=2.259;HRun=2;HaplotypeScore=211.7884;InbreedingCoeff=-0.1291;MQ=34.99;MQ0=69;MQRankSum=-3.316;QD=2.21;ReadPosRankSum=1.396;VQSLOD=-0.2631;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:21:31.14:0,31,350	0/0:23,0:16:32.43:0,32,328	0/1:21,0:4:7.31:7,0,83	0/0:19,0:8:17.51:0,18,191	0/0:22,0:18:25.72:0,26,315	0/1:10,2:9:9.49:9,0,206	0/0:23,0:19:29.93:0,30,393	0/0:86,3:68:66.82:0,67,1473	0/0:26,2:23:13.28:0,13,603	0/0:106,0:92:99:0,193,2782	0/1:44,0:36:6.08:6,0,280	0/0:36,0:36:39.43:0,39,430	0/1:28,22:44:99:537,0,328	0/1:27,2:21:75.79:142,0,76	0/0:37,0:36:30.68:0,31,423	0/0:38,0:35:36.04:0,36,591	0/0:20,0:20:16.72:0,17,214	0/0:26,2:26:26.45:0,26,722	0/0:35,3:23:12.08:0,12,500	0/0:43,1:36:23.84:0,24,351	0/1:55,1:47:14.55:15,0,245	0/0:31,0:30:26.97:0,27,319	0/0:29,0:26:29.53:0,30,251	0/0:51,0:49:37.66:0,38,366	0/1:58,1:52:0.70:1,0,481	0/0:60,1:47:61.50:0,61,1093	0/0:18,0:12:23.76:0,24,321	0/0:12,0:8:6.28:0,6,59
chr10	39696893	.	C	CCAT	213.10	PASS	AB=0.985;AC=10;AF=0.185;AN=54;BaseQRankSum=2.843;DP=614;FS=5.160;HRun=0;HaplotypeScore=170.2094;InbreedingCoeff=-0.1207;MQ=53.46;MQ0=18;MQRankSum=-2.173;QD=1.28;ReadPosRankSum=-4.842;VQSLOD=1.0379;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:13:16.16:0,16,238	0/1:15,1:13:48.31:48,0,180	0/0:23,0:17:44.30:0,44,628	0/0:36,0:30:87.28:0,87,1356	0/0:17,0:16:10.53:0,11,194	./.	0/1:15,0:12:62.88:63,0,126	0/0:56,0:49:99:0,116,1644	0/1:14,1:11:79.53:94,0,80	0/0:49,1:42:27.48:0,27,666	0/0:16,0:13:2.54:0,3,49	0/0:26,0:26:43.39:0,43,710	0/1:27,0:23:22.62:23,0,637	0/0:18,0:13:16.30:0,16,248	0/0:26,0:26:45.16:0,45,620	0/1:20,0:19:11.88:12,0,332	0/0:13,0:11:27.09:0,27,414	0/0:17,1:18:36.01:0,36,484	0/1:17,0:14:47.46:47,0,365	1/1:21,0:18:0.59:7,1,0	0/0:24,0:20:6.93:0,7,98	0/0:23,0:20:23.25:0,23,321	0/0:26,0:26:30.94:0,31,575	0/0:31,0:30:62.75:0,63,1008	0/0:17,0:14:4.23:0,4,95	0/1:29,0:24:21.42:21,0,640	0/0:9,0:8:11.95:0,12,130	0/1:6,0:5:32.93:33,0,37
chr10	39698301	.	ATG	A	3891.07	PASS	AB=0.804;AC=40;AF=0.741;AN=54;BaseQRankSum=5.142;DP=646;FS=2.399;HRun=0;HaplotypeScore=114.4845;InbreedingCoeff=0.5444;MQ=63.32;MQ0=7;MQRankSum=-0.352;QD=8.31;ReadPosRankSum=1.177;VQSLOD=3.3303;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:43:18.10:0,18,147	1/1:2,0:9:11.36:56,11,0	./.	0/0:34,0:12:8.61:0,9,89	1/1:9,0:24:14.19:75,14,0	0/1:13,2:15:4.45:4,0,297	0/0:23,0:23:30.10:0,30,459	1/1:24,10:36:35.51:327,36,0	0/1:26,2:29:14.76:15,0,686	1/1:7,0:28:40.31:227,40,0	1/1:3,0:14:11.36:56,11,0	1/1:4,0:14:25.57:126,26,0	0/0:23,0:23:1.57:0,2,482	0/0:20,0:20:26.93:0,27,359	1/1:8,0:24:22.68:110,23,0	1/1:7,0:24:22.68:111,23,0	1/1:9,0:25:8.18:61,8,0	1/1:5,0:20:19.72:95,20,0	0/1:16,5:22:17.42:163,0,17	1/1:6,12:18:8.16:320,8,0	0/1:14,17:31:20.21:296,0,20	1/1:6,0:13:11.36:56,11,0	1/1:6,0:22:19.80:98,20,0	1/1:4,0:12:17.52:84,18,0	1/1:8,17:26:33.09:379,33,0	1/1:10,16:26:44.69:460,45,0	1/1:2,18:20:39.11:448,39,0	1/1:5,7:13:29.92:324,30,0
chr10	39698917	.	TTTCCTTCC	T	8748.76	PASS	AB=0.971;AC=27;AF=0.482;AN=56;BaseQRankSum=-6.830;DP=580;FS=22.948;HRun=0;HaplotypeScore=165.5943;InbreedingCoeff=-0.1440;MQ=65.76;MQ0=4;MQRankSum=3.745;QD=19.14;ReadPosRankSum=4.884;VQSLOD=2.7380;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:39,0:39:40.49:45,0,40	0/1:13,0:12:99:290,0,112	0/0:20,0:14:32.39:0,32,478	0/0:12,0:10:24.07:0,24,461	1/1:22,0:22:2.89:28,3,0	0/1:22,0:22:14.12:14,0,721	0/0:27,0:26:9.43:0,9,90	1/1:3,23:26:69.08:946,69,0	1/1:7,0:6:2.72:7,3,0	0/1:26,0:26:99:962,0,137	0/1:25,0:25:99:695,0,217	0/0:13,0:13:2.35:0,2,7	0/0:22,0:22:51.12:0,51,1116	0/0:20,0:20:54.17:0,54,1392	1/1:16,0:16:6.02:97,6,0	1/1:19,0:19:5.75:110,6,0	0/1:34,0:34:13.92:14,0,40	0/1:19,0:19:99:589,0,208	0/1:6,19:23:37.91:797,0,38	0/1:18,0:18:99:545,0,210	1/1:11,0:11:24.65:459,25,0	0/1:15,0:15:1.79:2,0,26	0/0:9,0:9:3.69:0,4,9	0/1:23,0:23:11.95:78,0,12	0/1:22,0:22:99:750,0,131	0/1:37,0:37:99:1291,0,404	0/1:21,0:21:99:535,0,318	0/1:17,0:17:4.67:494,0,5
chr10	39698924	.	CCTTCCTTTCTTTCTTTCTTT	C	6505.33	PASS	AB=0.933;AC=31;AF=0.554;AN=56;BaseQRankSum=-7.256;DP=551;FS=9.681;HRun=0;HaplotypeScore=285.7781;InbreedingCoeff=-0.0972;MQ=60.86;MQ0=5;MQRankSum=3.532;QD=14.05;ReadPosRankSum=-0.864;VQSLOD=1.7946;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:33,0:34:89.51:829,90,0	0/1:11,0:10:99:110,0,779	0/0:15,0:9:20.29:0,20,192	0/0:10,0:8:20.98:0,21,212	1/1:20,0:20:59.55:495,60,0	0/0:22,0:22:51.02:0,51,1001	0/1:25,0:23:99:311,0,260	1/1:23,0:23:48.49:372,48,0	0/1:7,0:6:61.91:62,0,349	0/1:28,0:28:99:332,0,1667	0/1:25,0:25:99:205,0,1938	1/1:12,0:12:35.95:329,36,0	0/0:21,0:21:47.65:0,48,2000	0/0:20,0:20:51.08:0,51,2477	1/1:0,15:15:6.02:336,6,0	0/1:0,16:17:84.16:161,0,84	1/1:2,31:33:6.02:264,6,0	0/1:20,0:20:99:183,0,1107	0/1:23,0:21:99:317,0,461	0/1:18,0:18:99:170,0,1311	0/1:11,0:11:99:170,0,215	1/1:15,0:15:41.72:323,42,0	0/1:0,0:9:6.76:7,0,41	1/1:22,0:22:62.59:504,63,0	0/1:20,0:20:99:298,0,1073	0/1:39,0:39:99:349,0,2914	0/1:21,0:21:99:160,0,2011	0/1:15,0:15:99:220,0,340
chr10	39698928	.	CCTTTCTTT	C	420.35	PASS	AC=14;AF=0.318;AN=44;BaseQRankSum=0.440;DP=539;FS=4.759;HRun=0;HaplotypeScore=187.9194;InbreedingCoeff=0.6941;MQ=58.60;MQ0=7;MQRankSum=-1.766;QD=2.86;ReadPosRankSum=-0.741;VQSLOD=2.5204;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:30:3.01:56,3,0	0/0:12,0:11:12.04:0,12,316	./.	./.	./.	1/1:15,6:21:6.02:147,6,0	1/1:26,0:24:5.56:69,6,0	0/0:26,0:26:3.63:0,4,10	1/1:7,0:6:2.97:21,3,0	0/0:23,0:23:24.07:0,24,569	0/0:24,0:24:29.98:0,30,625	./.	0/0:14,0:20:15.05:0,15,509	0/0:20,0:20:30.10:0,30,867	1/1:15,0:15:6.02:112,6,0	1/1:17,0:17:5.58:120,6,0	1/1:31,0:31:5.93:40,6,0	0/0:17,0:17:14.64:0,15,412	0/0:28,0:24:6.02:0,6,200	0/0:18,0:18:18.06:0,18,504	0/0:13,0:13:10.58:0,11,135	./.	0/0:9,0:9:1.41:0,1,2	./.	0/0:21,0:21:18.06:0,18,435	0/0:34,0:34:36.09:0,36,1013	0/0:23,0:23:27.09:0,27,748	0/0:14,0:14:6.02:0,6,131
chr10	39698997	.	TC	T	1419.01	PASS	AB=0.864;AC=28;AF=0.500;AN=56;BaseQRankSum=5.294;DP=367;FS=17.019;HRun=10;HaplotypeScore=75.1179;InbreedingCoeff=0.4874;MQ=66.77;MQ0=3;MQRankSum=0.489;QD=6.63;ReadPosRankSum=5.661;VQSLOD=0.2590;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:16,18:35:55.87:465,56,0	1/1:2,0:8:14.04:41,14,0	0/0:23,0:14:35.86:0,36,372	0/0:16,0:10:19.84:0,20,170	0/0:12,0:12:18.03:0,18,186	0/1:7,1:8:20.04:20,0,27	0/0:21,0:21:39.53:0,40,405	0/1:8,1:9:13.73:20,0,14	0/0:11,0:11:19.53:0,20,167	1/1:1,0:10:18.11:53,18,0	1/1:1,0:10:19.89:57,20,0	0/0:20,0:21:41.94:0,42,392	0/0:12,0:12:20.96:0,21,188	0/1:7,1:10:13.56:14,0,74	0/0:12,0:12:17.86:0,18,130	0/1:16,1:17:18.68:19,0,256	0/1:18,2:20:24.96:25,0,192	1/1:2,0:9:12:35,12,0	1/1:5,1:6:2.98:26,3,0	1/1:5,6:11:20.94:174,21,0	1/1:11,5:16:11.96:101,12,0	0/0:6,0:6:6.01:0,6,66	0/0:6,0:6:3.89:0,4,35	0/0:13,0:13:30.06:0,30,315	0/1:5,6:12:8.40:139,0,8	1/1:9,8:18:31.70:247,32,0	1/1:7,6:13:19.78:160,20,0	1/1:1,1:2:2.99:26,3,0
chr10	39699889	.	TA	T	1248.08	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=13.232;DP=685;FS=0.995;HRun=1;HaplotypeScore=91.4485;InbreedingCoeff=0.9873;MQ=72.38;MQ0=0;MQRankSum=-11.727;QD=18.63;ReadPosRankSum=0.427;VQSLOD=3.8291;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:54.18:0,54,863	1/1:0,10:10:29.86:224,30,0	0/0:11,0:11:20.98:0,21,286	0/0:10,0:11:13.05:0,13,202	0/0:27,0:27:81.28:0,81,1291	0/0:32,0:32:96.31:0,96,1509	0/0:20,0:20:60.20:0,60,956	0/0:36,0:36:99:0,102,1629	0/0:33,0:33:99:0,99,1556	1/1:5,22:27:74.06:552,74,0	1/1:0,25:25:71.55:516,72,0	0/0:23,0:23:69.21:0,69,1057	0/0:32,0:32:96.33:0,96,1535	0/0:32,0:32:96.33:0,96,1534	0/0:32,0:32:93.32:0,93,1487	0/0:33,0:33:99:0,99,1536	0/0:21,0:21:63.17:0,63,957	1/1:0,5:5:14.94:115,15,0	0/0:16,0:16:48.16:0,48,767	0/0:30,0:30:90.31:0,90,1436	0/0:17,0:17:51.13:0,51,776	0/0:31,0:31:93.32:0,93,1485	0/0:28,0:28:84.27:0,84,1317	0/0:22,0:22:63.15:0,63,977	0/0:21,0:21:63.19:0,63,958	0/0:30,0:30:90.27:0,90,1412	0/0:46,0:45:99:0,138,2201	0/0:16,0:16:48.16:0,48,763
chr10	39699891	.	TGTTAA	T	3067.88	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=13.428;DP=685;FS=1.536;HRun=0;HaplotypeScore=141.5264;InbreedingCoeff=0.8625;MQ=71.79;MQ0=0;MQRankSum=-10.502;QD=40.37;ReadPosRankSum=0.221;VQSLOD=3.5329;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:54.19:0,54,1797	1/1:1,10:11:33.10:528,33,0	0/0:11,0:11:22.50:0,22,553	0/1:10,0:10:47.79:48,0,247	0/0:26,0:26:78.27:0,78,2496	0/0:30,0:30:90.29:0,90,2829	0/0:19,0:19:57.20:0,57,1898	0/0:36,0:36:99:0,102,3199	0/0:31,0:31:93.32:0,93,3024	1/1:3,22:25:75.22:1211,75,0	1/1:0,25:25:72.25:1190,72,0	0/0:23,0:23:69.24:0,69,2227	0/0:32,0:32:96.33:0,96,3104	0/0:33,0:33:99:0,99,3120	0/0:34,0:34:99:0,102,3108	0/0:34,0:34:99:0,102,3182	0/0:19,0:19:57.20:0,57,1861	1/1:0,5:5:15.05:255,15,0	0/0:18,0:18:54.15:0,54,1427	0/0:30,0:30:90.29:0,90,2885	0/0:17,0:17:51.17:0,51,1589	0/0:31,0:31:93.32:0,93,3048	0/0:27,0:27:81.28:0,81,2576	0/0:23,0:23:66.22:0,66,2076	0/0:21,0:21:63.22:0,63,1994	0/0:32,0:32:96.31:0,96,2957	0/0:48,0:47:99:0,144,3978	0/0:16,0:16:48.16:0,48,1561
chr10	39699894	.	TAA	T	2063.93	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=13.392;DP=680;FS=2.101;HRun=2;HaplotypeScore=101.5443;InbreedingCoeff=0.8560;MQ=70.61;MQ0=0;MQRankSum=-9.936;QD=26.46;ReadPosRankSum=-0.632;VQSLOD=2.5082;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:57.20:0,57,1156	1/1:12,0:12:36.09:396,36,0	0/0:10,0:10:11.64:0,12,352	0/1:9,0:9:24.01:24,0,145	0/0:25,0:25:75.24:0,75,1486	0/0:28,0:28:84.25:0,84,1667	0/0:19,0:19:57.20:0,57,1159	0/0:34,0:34:96.32:0,96,1916	0/0:33,0:33:99:0,99,1902	1/1:22,5:27:81.19:888,81,0	1/1:25,0:25:72.18:756,72,0	0/0:24,0:24:72.25:0,72,1441	0/0:31,0:31:93.30:0,93,1852	0/0:34,0:34:99:0,102,1975	0/0:33,0:33:99:0,99,2012	0/0:34,0:34:99:0,102,2072	0/0:20,0:20:60.18:0,60,1180	1/1:5,0:5:15.04:165,15,0	0/0:15,0:15:45.15:0,45,899	0/0:30,0:30:90.30:0,90,1792	0/0:17,0:17:51.18:0,51,1034	0/0:31,0:31:93.32:0,93,1886	0/0:27,0:27:81.26:0,81,1588	0/0:25,0:25:72.25:0,72,1451	0/0:21,0:21:63.22:0,63,1281	0/0:35,0:35:99:0,105,2129	0/0:41,0:40:99:0,123,2478	0/0:16,0:16:48.16:0,48,975
chr10	39700341	.	ATGTGTGATGTGTG	A	2806.72	PASS	AB=0.954;AC=9;AF=0.161;AN=56;BaseQRankSum=6.637;DP=1122;FS=11.434;HRun=0;HaplotypeScore=438.7196;InbreedingCoeff=0.5095;MQ=55.69;MQ0=12;MQRankSum=-7.808;QD=15.01;ReadPosRankSum=-0.021;VQSLOD=0.5759;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:46:99:0,100,4753	1/1:6,6:12:6.02:220,6,0	0/0:63,0:32:60.14:0,60,1630	0/0:73,0:43:68.59:0,69,2005	0/0:34,0:34:93.06:0,93,4108	0/0:31,0:32:78.08:0,78,2639	0/1:43,0:43:9.70:10,0,1668	0/0:49,0:49:90.16:0,90,2617	0/0:46,0:46:75.04:0,75,3122	1/1:24,12:36:66.22:2014,66,0	1/1:9,20:29:2.23:202,2,0	0/0:37,0:37:61.09:0,61,4324	0/0:36,0:36:99:0,102,4846	0/0:41,0:41:99:0,114,6396	0/0:52,0:52:99:0,120,6336	0/0:42,0:42:99:0,99,4994	0/0:38,0:37:87.74:0,88,3861	0/1:13,2:15:67.74:355,0,68	0/0:32,0:29:54.19:0,54,2103	0/0:37,0:37:90.29:0,90,4054	0/0:75,0:76:99:0,192,9050	0/0:40,0:40:81.28:0,81,4242	0/0:32,0:32:72.23:0,72,3587	0/0:49,0:49:99:0,126,6375	0/0:28,0:28:69.24:0,69,3647	0/1:51,1:51:99:148,0,5117	0/0:29,0:29:63.22:0,63,3499	0/0:20,0:20:51.17:0,51,2616
chr10	39700348	.	ATG	A	3682	PASS	AB=0.875;AC=13;AF=0.232;AN=56;BaseQRankSum=10.428;DP=1118;FS=0.750;HRun=0;HaplotypeScore=213.9943;InbreedingCoeff=0.8382;MQ=54.49;MQ0=11;MQRankSum=2.233;QD=17.79;ReadPosRankSum=2.419;VQSLOD=3.5504;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:48:99:0,108,1783	1/1:6,2:10:5.88:49,6,0	0/0:61,1:32:63.78:0,64,1082	0/0:64,2:36:36.46:0,36,1022	0/0:38,0:38:99:0,108,1782	1/1:2,29:31:70.64:959,71,0	1/1:7,33:40:71.75:925,72,0	0/0:46,0:46:99:0,102,1587	1/1:6,42:48:78.74:1143,79,0	1/1:28,6:36:58.82:442,59,0	1/1:23,0:28:2.49:47,2,0	0/0:39,0:40:98.91:0,99,1592	0/0:38,0:38:99:0,111,1848	0/0:42,0:42:99:0,120,1996	0/0:54,0:54:99:0,126,2111	0/0:45,0:45:99:0,105,1709	0/0:36,0:35:93.18:0,93,1530	0/1:12,2:14:28.76:117,0,29	0/0:31,0:28:63.21:0,63,1042	0/0:37,0:37:96.31:0,96,1582	0/0:80,0:79:99:0,202,3437	0/0:37,0:37:90.31:0,90,1518	0/0:29,0:29:75.26:0,75,1265	0/0:48,0:48:99:0,126,2126	0/0:31,0:31:81.28:0,81,1355	0/0:49,2:50:31.94:0,32,1947	0/0:31,0:31:63.69:0,64,1062	0/0:20,0:20:51.04:0,51,825
chr10	39700409	.	CTG	C	3118.35	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=8.861;DP=1108;FS=6.707;HRun=0;HaplotypeScore=221.2440;InbreedingCoeff=1.0000;MQ=62.19;MQ0=0;MQRankSum=-2.414;QD=30.57;ReadPosRankSum=0.454;VQSLOD=3.5827;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:43:99:0,105,1791	1/1:1,14:15:39.13:512,39,0	0/0:38,0:32:63.97:0,64,1087	0/0:44,0:40:83.84:0,84,1349	0/0:45,0:45:99:0,135,2300	0/0:31,0:31:87.30:0,87,1491	0/0:31,0:31:87.30:0,87,1492	0/0:51,0:51:99:0,123,2083	0/0:46,0:46:99:0,108,1847	1/1:8,41:49:99:1584,123,0	1/1:4,19:23:51.63:670,52,0	0/0:49,0:49:99:0,114,1942	0/0:46,0:46:99:0,120,2057	0/0:44,0:44:99:0,117,1963	0/0:55,0:55:99:0,144,2441	0/0:47,0:46:99:0,123,2108	0/0:31,0:31:75.25:0,75,1263	1/1:1,13:15:39.12:512,39,0	0/0:25,0:25:66.23:0,66,1111	0/0:32,0:32:90.31:0,90,1538	0/0:87,0:87:99:0,232,3846	0/0:37,0:37:99:0,105,1800	0/0:30,0:30:87.27:0,87,1435	0/0:55,0:55:99:0,126,2151	0/0:32,0:32:75.23:0,75,1234	0/0:48,1:49:99:0,105,2379	0/0:24,0:24:66.23:0,66,1122	0/0:32,0:32:93.32:0,93,1534
chr10	39700550	.	GGTGTGTGT	G	5309.58	PASS	AB=0.709;AC=24;AF=0.429;AN=56;BaseQRankSum=5.612;DP=960;FS=5.933;HRun=0;HaplotypeScore=291.8589;InbreedingCoeff=0.3709;MQ=49.01;MQ0=32;MQRankSum=-10.021;QD=10.31;ReadPosRankSum=5.077;VQSLOD=2.7381;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:65,0:70:99:0,144,4322	0/0:3,0:3:3.01:0,3,66	0/0:47,0:15:5.99:0,6,139	0/0:62,0:20:6.02:0,6,167	0/1:11,2:20:17.84:20,0,18	0/0:18,0:24:21.06:0,21,666	0/0:28,0:47:66.66:0,67,2206	0/1:37,8:45:39.03:347,0,39	0/0:14,0:29:41:0,41,1776	0/0:31,0:40:62.05:0,62,2363	0/0:10,0:12:14.96:0,15,457	0/1:18,3:41:18.25:218,0,18	0/0:29,0:33:84.27:0,84,2716	0/0:35,0:41:87.27:0,87,2845	1/1:21,2:40:8.43:199,8,0	0/1:21,4:40:99:291,0,214	0/1:17,1:26:15.81:121,0,16	0/0:5,0:5:3.01:0,3,76	1/1:19,6:27:0.15:521,0,0	1/1:10,14:26:14.97:248,15,0	1/1:39,15:55:1.35:6,1,0	0/0:11,0:26:32.97:0,33,295	1/1:12,0:27:4.74:62,5,0	0/1:30,2:50:67.98:68,0,82	1/1:10,14:26:32.98:608,33,0	1/1:19,24:46:12.16:1766,12,0	1/1:13,14:27:26.88:681,27,0	1/1:2,5:6:6.02:153,6,0
chr10	39700973	.	T	TC	494.39	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-1.727;DP=479;FS=3.666;HRun=0;HaplotypeScore=63.2044;InbreedingCoeff=0.6691;MQ=45.57;MQ0=34;MQRankSum=1.235;QD=16.48;ReadPosRankSum=3.321;VQSLOD=5.9327;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:13,17:26:41:589,41,0	0/0:9,0:9:14.88:0,15,108	0/0:6,0:3:7.82:0,8,69	0/0:6,0:2:2.96:0,3,19	0/0:20,0:20:32.56:0,33,334	0/0:10,0:10:29.46:0,29,189	0/0:22,0:16:29.56:0,30,193	0/0:29,0:23:52.37:0,52,401	0/0:18,0:18:46.18:0,46,340	0/0:27,0:26:61.79:0,62,394	0/0:12,0:11:16.53:0,17,108	0/0:11,0:8:12.83:0,13,147	0/0:18,0:15:15.40:0,15,99	0/0:19,0:19:52.83:0,53,345	0/0:20,0:18:38.61:0,39,322	0/0:23,0:20:23.39:0,23,201	0/0:28,0:25:10.95:0,11,48	0/0:13,0:8:17.42:0,17,105	0/0:27,0:26:71.62:0,72,688	0/0:12,0:12:23.38:0,23,219	0/0:12,0:10:23.44:0,23,215	0/0:9,0:7:7.76:0,8,86	0/0:8,0:4:11.91:0,12,116	0/0:15,0:14:38.93:0,39,419	0/0:13,0:13:28.44:0,28,263	0/0:25,0:23:65.12:0,65,549	0/0:22,0:22:57.61:0,58,542	0/0:15,0:12:35.56:0,36,311
chr10	39701407	.	T	TA	2531.73	PASS	AB=0.917;AC=10;AF=0.179;AN=56;BaseQRankSum=-9.129;DP=390;FS=4.799;HRun=1;HaplotypeScore=53.5515;InbreedingCoeff=0.6969;MQ=69.37;MQ0=1;MQRankSum=3.087;QD=34.21;ReadPosRankSum=1.598;VQSLOD=3.4740;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:63.20:0,63,817	1/1:0,5:5:15.05:225,15,0	0/1:4,1:5:17.01:17,0,139	0/1:8,0:8:9.87:10,0,74	0/0:25,0:25:75.24:0,75,972	0/0:12,0:12:36.12:0,36,466	0/0:9,0:9:27.09:0,27,351	0/0:43,0:43:99:0,123,1596	0/0:10,0:10:27.09:0,27,349	1/1:0,15:15:45.15:672,45,0	1/1:0,18:18:54.18:810,54,0	0/0:6,0:6:15.05:0,15,195	0/0:7,0:7:21.04:0,21,243	0/0:12,0:12:33.11:0,33,428	0/0:7,0:7:21.07:0,21,273	0/0:12,0:12:33.08:0,33,401	0/0:24,0:24:72.23:0,72,933	1/1:0,23:23:66.18:964,66,0	0/0:17,0:17:51.17:0,51,662	0/0:27,0:27:78.21:0,78,1011	0/0:5,0:5:15.05:0,15,195	0/0:1,0:1:3.01:0,3,39	0/0:4,0:4:12.04:0,12,156	0/0:2,0:2:6.02:0,6,78	0/0:13,0:13:39.13:0,39,506	0/0:19,0:18:50.87:0,51,662	0/0:23,0:22:69.22:0,69,893	0/0:14,0:14:39.13:0,39,506
chr10	39701553	.	C	CA	2933.25	PASS	AB=0.824;AC=30;AF=0.789;AN=38;BaseQRankSum=-1.678;DP=241;FS=0.845;HRun=11;HaplotypeScore=44.9877;InbreedingCoeff=0.3542;MQ=58.77;MQ0=10;MQRankSum=-0.008;QD=14.03;ReadPosRankSum=-0.498;VQSLOD=3.2610;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	1/1:2,1:9:22.99:133,23,0	0/1:7,0:4:11.93:15,0,12	0/1:5,0:3:0.14:0,0,0	1/1:3,14:16:36.07:365,36,0	1/1:6,9:15:3.82:220,4,0	1/1:4,8:12:0.82:190,1,0	./.	1/1:3,10:12:27.05:274,27,0	1/1:9,4:17:26.29:195,26,0	1/1:6,1:14:22.89:130,23,0	1/1:4,8:12:21.04:213,21,0	0/0:8,0:7:11.91:0,12,93	0/0:15,0:15:32.86:0,33,255	1/1:1,6:7:18:172,18,0	1/1:3,11:13:30.06:304,30,0	0/1:10,19:30:12.32:412,0,12	1/1:5,1:11:25.73:152,26,0	./.	./.	./.	1/1:3,3:6:3.01:30,3,0	1/1:3,4:6:12.02:122,12,0	0/1:6,5:10:24.54:132,0,25	./.	./.	./.	./.
chr10	39701951	.	CTGTGTG	C	252.98	PASS	AB=0.718;AC=14;AF=0.269;AN=52;BaseQRankSum=5.008;DP=626;FS=20.954;HRun=0;HaplotypeScore=125.8295;InbreedingCoeff=0.6434;MQ=58.25;MQ0=17;MQRankSum=1.093;QD=1.51;ReadPosRankSum=1.386;VQSLOD=0.7166;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:44:18.54:0,19,271	0/0:13,0:13:16.74:0,17,254	./.	./.	0/1:20,7:26:0:0,0,0	0/0:22,0:22:18.96:0,19,452	0/0:22,0:27:18.02:0,18,324	0/0:36,0:32:18.14:0,18,193	0/0:13,0:16:12.04:0,12,299	0/0:26,0:25:45.23:0,45,977	0/0:9,0:9:5.04:0,5,99	1/1:12,0:12:2.79:7,3,0	0/0:14,0:14:6.49:0,6,73	0/0:23,0:23:10.96:0,11,387	1/1:8,5:13:3.01:61,3,0	1/1:12,0:14:12.44:143,12,0	1/1:23,16:39:3:61,3,0	0/0:11,0:23:9:0,9,178	0/0:19,0:17:9.40:0,9,171	0/0:16,0:15:14.26:0,14,359	0/0:43,0:42:51.04:0,51,1076	1/1:13,0:13:11.69:113,12,0	1/1:7,0:12:1.28:3,1,0	0/1:16,0:36:2.75:3,0,53	0/0:11,0:11:18.03:0,18,292	0/0:30,0:30:27.93:0,28,546	0/0:17,0:16:18.01:0,18,403	0/0:6,0:6:11.87:0,12,285
chr10	39702079	.	A	ATTT	5622.52	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-0.144;DP=444;FS=1.411;HRun=11;HaplotypeScore=97.1205;InbreedingCoeff=0.9200;MQ=59.53;MQ0=4;MQRankSum=-7.382;QD=25.33;ReadPosRankSum=-3.689;VQSLOD=3.1975;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,16:23:48.12:818,48,0	1/1:2,0:5:4.23:26,4,0	0/0:20,0:15:24.12:0,24,312	0/0:14,0:11:14.81:0,15,121	0/0:24,0:27:47.70:0,48,550	0/0:11,0:13:28.49:0,28,297	0/0:13,0:13:30.04:0,30,349	1/1:10,7:19:48.11:760,48,0	0/0:11,0:11:33.04:0,33,358	1/1:7,0:24:61.30:471,61,0	1/1:3,0:9:19.19:143,19,0	0/0:5,0:5:15.04:0,15,175	0/0:6,0:8:1.50:0,1,32	1/1:3,0:18:16.61:52,17,0	0/0:19,0:19:44.91:0,45,491	0/0:12,0:12:30.04:0,30,351	0/0:30,0:31:74.61:0,75,886	1/1:3,1:15:29.91:262,30,0	1/1:12,6:20:33.08:531,33,0	1/1:9,6:15:19.57:305,20,0	1/1:3,2:5:6.02:113,6,0	0/0:9,0:10:23.99:0,24,263	0/0:16,0:16:36.07:0,36,414	0/0:21,0:22:38.40:0,38,437	1/1:9,10:20:51.17:899,51,0	1/1:5,5:13:33.05:481,33,0	1/1:13,6:19:39.11:631,39,0	1/1:5,1:8:9.03:130,9,0
chr10	39702095	.	C	CT	1527.41	PASS	AB=0.862;AC=18;AF=0.321;AN=56;BaseQRankSum=0.392;DP=423;FS=6.656;HRun=8;HaplotypeScore=86.6282;InbreedingCoeff=0.8352;MQ=49.33;MQ0=14;MQRankSum=-7.631;QD=10.91;ReadPosRankSum=-2.243;VQSLOD=2.0739;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:12,12:20:18.05:203,18,0	0/0:4,0:4:5.99:0,6,55	0/0:11,1:9:11.96:0,12,99	0/1:10,1:8:3.04:22,0,3	0/0:27,0:26:53.89:0,54,473	0/0:11,0:10:24:0,24,219	0/0:15,0:15:22.32:0,22,264	1/1:13,7:18:21.02:227,21,0	0/0:12,0:12:27.01:0,27,246	0/0:23,0:22:41.99:0,42,384	0/0:10,0:10:21.01:0,21,191	0/0:10,0:9:21:0,21,188	0/0:6,0:6:9:0,9,82	0/0:18,0:17:29.85:0,30,251	0/0:16,1:17:4.33:0,4,294	0/0:15,0:14:26.99:0,27,242	0/0:38,0:36:90:0,90,815	0/0:16,0:17:30.01:0,30,274	1/1:11,6:17:22.42:245,22,0	1/1:3,7:10:18.05:207,18,0	0/1:3,1:2:0:0,0,0	0/0:10,0:10:20.93:0,21,192	0/0:18,0:17:33.01:0,33,301	0/0:19,0:19:44.99:0,45,404	1/1:8,8:16:24.06:263,24,0	1/1:7,11:16:8.69:343,9,0	1/1:10,6:14:12.04:139,12,0	1/1:1,2:3:7.83:74,8,0
chr10	39702850	.	ATGTGTGTGTGTG	A	2934.34	PASS	AB=0.655;AC=13;AF=0.232;AN=56;BaseQRankSum=7.245;DP=685;FS=1.376;HRun=0;HaplotypeScore=212.6504;InbreedingCoeff=0.8175;MQ=54.28;MQ0=24;MQRankSum=-8.139;QD=17.26;ReadPosRankSum=2.517;VQSLOD=2.7351;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:42.09:0,42,1449	0/0:10,0:13:18.06:0,18,627	0/0:39,0:16:0:0,0,0	0/0:40,0:13:3.01:0,3,68	1/1:10,7:20:12.04:273,12,0	0/0:20,0:21:30.57:0,31,1290	0/0:21,0:24:16.79:0,17,1419	0/0:36,0:34:24.08:0,24,458	0/0:22,0:23:34.67:0,35,1385	0/0:13,0:19:36.11:0,36,1108	0/0:12,0:17:33.11:0,33,1162	0/0:14,0:19:21.07:0,21,571	1/1:8,0:23:11.86:287,12,0	1/1:17,0:35:27.56:713,28,0	1/1:13,15:28:24.08:780,24,0	1/1:13,10:23:18.03:500,18,0	0/1:9,10:18:4.75:198,0,5	0/0:18,0:21:35.32:0,35,928	0/0:9,0:12:9.29:0,9,86	0/0:14,0:28:14.81:0,15,223	0/0:39,0:35:18.97:0,19,265	1/1:13,8:20:12.04:365,12,0	0/0:17,0:18:18.03:0,18,241	0/0:14,0:16:9.50:0,10,232	0/0:13,0:24:21.07:0,21,412	0/0:31,0:31:32.70:0,33,693	0/0:16,0:26:22.01:0,22,404	0/0:7,0:7:15.05:0,15,208
chr10	39704654	.	A	ATTTCAGATACTGCTGTGTTATCAA	2238.26	PASS	AB=0.697;AC=28;AF=0.933;AN=30;BaseQRankSum=-2.600;DP=38;FS=9.542;HRun=0;HaplotypeScore=35.7166;InbreedingCoeff=-0.2331;MQ=136.87;MQ0=0;MQRankSum=-2.080;QD=62.17;ReadPosRankSum=-0.966;VQSLOD=0.3651;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,0:3:3.01:49,3,0	1/1:1,0:1:3.01:62,3,0	0/1:5,1:8:46.57:1079,0,47	0/1:2,0:4:9.30:482,0,9	./.	./.	1/1:1,0:1:3.01:49,3,0	1/1:1,0:1:3.01:57,3,0	./.	1/1:2,0:2:6.01:55,6,0	./.	1/1:1,0:1:3.01:49,3,0	./.	./.	./.	1/1:2,0:2:6.02:110,6,0	1/1:3,0:3:2.99:24,3,0	./.	1/1:1,0:1:3:27,3,0	1/1:1,0:1:3.01:52,3,0	1/1:4,0:4:5.98:77,6,0	./.	./.	./.	./.	1/1:2,0:2:6:95,6,0	1/1:2,0:2:3.01:58,3,0	./.
chr10	39707196	.	A	AAATAAT	2326.10	PASS	AC=46;AF=0.958;AN=48;BaseQRankSum=0.703;DP=208;FS=0.000;HRun=0;HaplotypeScore=55.6303;InbreedingCoeff=0.2303;MQ=67.30;MQ0=1;MQRankSum=-0.247;QD=12.44;ReadPosRankSum=-0.627;VQSLOD=1.6245;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:5:2.94:18,3,0	1/1:2,3:5:6.02:171,6,0	./.	./.	1/1:3,2:5:6.02:193,6,0	1/1:3,0:7:11.77:73,12,0	1/1:1,0:2:2.94:18,3,0	1/1:34,0:34:23.85:195,24,0	1/1:1,0:6:14.71:92,15,0	./.	1/1:3,0:3:9:141,9,0	0/0:3,0:3:6.02:0,6,99	1/1:3,1:5:3.01:96,3,0	1/1:2,2:4:6.02:173,6,0	1/1:1,1:2:3.01:96,3,0	1/1:4,1:5:3.01:96,3,0	1/1:9,9:20:12.04:350,12,0	1/1:13,5:22:6.02:172,6,0	1/1:4,0:8:11.78:74,12,0	1/1:4,0:6:5.95:57,6,0	1/1:0,0:1:2.94:18,3,0	./.	1/1:5,0:5:0.47:1,0,0	1/1:6,0:6:6.01:59,6,0	1/1:7,0:7:5.97:66,6,0	1/1:4,0:10:14.71:92,15,0	1/1:8,0:12:14.74:93,15,0	1/1:3,0:6:11.77:73,12,0
chr10	39707237	.	A	AT	93.30	PASS	AB=0.750;AC=7;AF=0.130;AN=54;BaseQRankSum=9.013;DP=218;FS=30.129;HRun=0;HaplotypeScore=35.1352;InbreedingCoeff=0.0820;MQ=60.78;MQ0=0;MQRankSum=-1.109;QD=4.24;ReadPosRankSum=3.243;VQSLOD=1.0156;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:4:8.38:0,8,123	0/0:5,0:5:5.01:0,5,99	0/0:8,0:5:12.93:0,13,168	0/0:5,0:3:9.01:0,9,107	0/0:9,0:9:12.82:0,13,265	0/0:6,0:6:0.38:0,0,36	0/0:2,0:2:2.36:0,2,40	0/0:33,0:33:56.42:0,56,1135	1/1:5,0:5:4.43:8,4,0	0/0:2,0:2:3.01:0,3,42	0/1:4,1:5:68.51:69,0,88	0/0:5,0:5:14.24:0,14,70	0/0:4,0:4:3.26:0,3,79	0/0:4,0:4:6.12:0,6,104	0/0:5,0:5:9.33:0,9,163	0/0:4,0:4:6.10:0,6,107	0/0:24,1:25:26.45:0,26,563	0/0:19,0:19:33.05:0,33,447	0/0:15,0:15:24.40:0,24,336	0/0:6,0:6:14.29:0,14,149	1/1:2,0:2:0.89:2,1,0	./.	0/0:2,0:2:2.21:0,2,14	0/1:2,2:4:15.88:42,0,16	0/1:4,2:6:77.13:77,0,148	0/0:11,0:11:14.78:0,15,243	0/0:11,1:12:1.49:0,1,265	0/0:10,0:10:15.48:0,15,244
chr10	39708326	.	T	TG	7745.37	PASS	AB=0.978;AC=50;AF=0.893;AN=56;BaseQRankSum=4.385;DP=627;FS=0.000;HRun=2;HaplotypeScore=107.9454;InbreedingCoeff=-0.0563;MQ=79.38;MQ0=0;MQRankSum=-2.266;QD=12.35;ReadPosRankSum=8.764;VQSLOD=2.7997;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:48,0:48:99:775,134,0	1/1:11,0:11:29.11:167,29,0	0/1:22,4:26:99:157,0,141	0/1:21,0:20:6.44:6,0,199	1/1:23,0:22:40.33:333,40,0	1/1:23,0:23:67.10:390,67,0	1/1:23,0:23:2.66:218,3,0	1/1:27,0:26:40.90:305,41,0	1/1:21,0:21:24.83:256,25,0	1/1:32,0:32:35.83:377,36,0	1/1:20,0:20:52.36:306,52,0	1/1:28,0:28:72.43:404,72,0	1/1:22,0:22:55.14:311,55,0	1/1:15,0:15:34.84:198,35,0	1/1:23,0:23:63.50:344,63,0	1/1:20,0:20:52.11:289,52,0	1/1:35,0:35:64.46:456,64,0	1/1:12,0:12:31.97:179,32,0	0/1:21,0:21:14.94:201,0,15	1/1:21,0:21:3.65:236,4,0	1/1:27,0:27:66.84:377,67,0	0/1:15,0:15:5.26:185,0,5	1/1:22,0:22:12.56:259,13,0	1/1:13,0:13:26.19:149,26,0	1/1:13,0:13:25.49:159,25,0	0/1:28,0:28:1.38:289,0,1	0/1:26,0:26:12.34:245,0,12	1/1:11,0:11:29.27:174,29,0
chr10	39708640	.	ATT	A	13012.89	PASS	AB=0.752;AC=46;AF=0.821;AN=56;BaseQRankSum=-7.956;DP=555;FS=4.458;HRun=10;HaplotypeScore=79.5426;InbreedingCoeff=0.8409;MQ=67.47;MQ0=4;MQRankSum=-1.581;QD=25.52;ReadPosRankSum=1.777;VQSLOD=4.9347;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,32:33:90.24:1003,90,0	1/1:4,8:11:21.04:234,21,0	0/1:13,0:14:0.19:0,0,320	0/0:7,0:6:15.05:0,15,236	1/1:3,25:28:66.12:723,66,0	1/1:1,27:28:72.19:803,72,0	1/1:2,11:13:24.06:268,24,0	1/1:4,23:27:60.09:651,60,0	1/1:1,18:19:51.14:568,51,0	1/1:1,23:23:66.18:735,66,0	1/1:2,23:25:69.18:769,69,0	0/0:0,0:8:16.79:0,17,57	1/1:2,18:20:51.14:568,51,0	1/1:0,17:17:48.13:535,48,0	1/1:3,21:24:57.14:635,57,0	1/1:1,9:10:21.05:234,21,0	1/1:2,19:21:51.14:568,51,0	0/1:4,13:17:3.34:332,0,3	1/1:4,13:17:39.10:435,39,0	1/1:4,27:29:66.14:734,66,0	1/1:5,7:12:21.04:234,21,0	1/1:1,20:21:60.16:664,60,0	0/0:1,0:20:44.92:0,45,154	0/0:1,0:10:17.19:0,17,59	1/1:3,11:14:27.06:301,27,0	1/1:8,28:36:81.14:881,81,0	1/1:6,31:36:87.21:970,87,0	1/1:3,6:9:15.04:167,15,0
chr10	39708977	.	T	TTTTG	28040.64	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-8.100;DP=706;FS=21.886;HRun=0;HaplotypeScore=94.1727;InbreedingCoeff=0.9525;MQ=65.31;MQ0=5;MQRankSum=-1.315;QD=43.95;ReadPosRankSum=4.850;VQSLOD=3.4803;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,39:45:81.28:2021,81,0	1/1:0,11:13:16.62:447,17,0	0/0:35,0:25:44.37:0,44,465	0/0:33,0:19:8.28:0,8,361	1/1:9,26:37:69.23:1566,69,0	1/1:3,23:27:48.16:1199,48,0	1/1:1,15:17:33.11:822,33,0	1/1:8,20:30:66.18:1266,66,0	1/1:5,15:20:29.36:748,29,0	1/1:4,21:27:69.21:1461,69,0	1/1:3,16:20:42.06:962,42,0	1/1:1,19:22:44.62:1123,45,0	1/1:2,16:20:39.13:973,39,0	1/1:5,14:19:33.11:824,33,0	1/1:1,24:27:54.19:1350,54,0	1/1:3,13:16:33.11:824,33,0	1/1:2,34:37:69.24:1724,69,0	1/1:2,14:16:33.11:814,33,0	1/1:6,19:25:63.18:1201,63,0	1/1:5,19:25:42.14:1012,42,0	1/1:5,21:28:48.16:1200,48,0	1/1:4,16:20:33.11:785,33,0	1/1:5,16:24:29.99:662,30,0	1/1:5,26:34:56.22:1328,56,0	1/1:1,10:14:18.06:450,18,0	1/1:4,25:31:69.20:1498,69,0	1/1:2,22:24:45.15:1116,45,0	1/1:3,14:18:27.09:663,27,0
chr10	39709337	.	CTTG	C	2852.28	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.801;DP=635;FS=1.102;HRun=0;HaplotypeScore=88.7554;InbreedingCoeff=0.9988;MQ=76.15;MQ0=0;MQRankSum=-1.945;QD=43.88;ReadPosRankSum=1.276;VQSLOD=5.3095;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:57.20:0,57,1363	0/0:8,0:8:24.08:0,24,581	0/0:13,0:13:30.02:0,30,599	0/0:14,0:14:32.57:0,33,657	0/0:30,0:30:90.31:0,90,2212	0/0:21,0:21:63.20:0,63,1446	0/0:23,0:23:69.24:0,69,1661	0/0:34,0:34:99:0,99,2198	0/0:12,0:12:36.12:0,36,877	0/0:35,0:35:99:0,105,2455	0/0:18,0:18:54.19:0,54,1326	1/1:0,27:27:69.24:1284,69,0	0/0:32,0:32:93.32:0,93,2262	0/0:28,0:28:84.21:0,84,1910	0/0:21,0:21:63.22:0,63,1553	0/0:25,0:25:75.25:0,75,1739	0/0:20,0:20:60.19:0,60,1415	0/0:15,0:15:45.15:0,45,1064	0/0:25,0:25:75.26:0,75,1824	0/0:22,0:22:66.20:0,66,1524	0/0:30,0:30:90.26:0,90,2010	0/0:21,0:21:63.22:0,63,1492	1/1:0,14:14:42.14:782,42,0	1/1:0,24:24:51.17:929,51,0	0/0:26,0:26:78.26:0,78,1854	0/0:30,0:30:90.30:0,90,2174	0/0:37,0:35:99:0,111,2620	0/0:11,0:11:33.11:0,33,813
chr10	39709844	.	ACTGT	A	6027.04	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=6.838;DP=713;FS=8.837;HRun=0;HaplotypeScore=145.4254;InbreedingCoeff=0.9569;MQ=57.50;MQ0=6;MQRankSum=-2.004;QD=28.98;ReadPosRankSum=4.920;VQSLOD=4.4351;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:52:68.23:0,68,1088	1/1:0,7:7:21.07:345,21,0	0/0:31,0:23:23.24:0,23,571	0/0:23,0:21:24.12:0,24,736	1/1:3,20:23:33.09:542,33,0	0/0:23,0:23:51.14:0,51,1146	0/0:21,0:21:51.16:0,51,1198	0/0:39,0:39:60.15:0,60,1291	0/0:44,0:44:81.28:0,81,1970	1/1:12,23:36:72.21:1129,72,0	1/1:9,15:24:26.92:444,27,0	0/0:10,0:18:6.02:0,6,105	0/0:8,0:25:42.13:0,42,707	0/0:10,0:30:42.14:0,42,750	1/1:2,24:25:42.14:690,42,0	1/1:5,29:33:63.22:1035,63,0	1/1:5,19:24:51.17:838,51,0	1/1:4,12:16:36.12:591,36,0	0/0:14,0:14:27.08:0,27,610	0/0:19,0:19:36.11:0,36,829	0/0:30,0:29:72.21:0,72,1627	1/1:5,13:18:27.04:413,27,0	0/0:13,0:17:6.49:0,6,65	0/0:11,0:20:9.02:0,9,130	0/0:23,0:23:50.96:0,51,1183	0/0:38,0:38:84.25:0,84,1999	0/0:30,0:30:45.12:0,45,948	0/0:7,0:6:18.06:0,18,440
chr10	39709949	.	A	AT	2327.98	PASS	AB=0.988;AC=46;AF=0.958;AN=48;DP=545;FS=0.000;HRun=1;HaplotypeScore=163.5135;InbreedingCoeff=0.2385;MQ=33.75;MQ0=2;QD=4.47;VQSLOD=0.1631;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	1/1:19,0:19:0.47:2,0,0	1/1:4,0:2:2.04:6,2,0	./.	0/1:40,1:40:0:0,0,0	1/1:13,1:14:5.98:47,6,0	1/1:9,1:10:5.77:33,6,0	1/1:40,1:41:99:633,103,0	1/1:16,1:17:6.29:34,6,0	1/1:42,0:42:82.55:486,83,0	1/1:39,0:39:8.01:53,8,0	1/1:5,0:5:3:25,3,0	1/1:5,1:6:5.54:28,6,0	./.	0/1:26,0:26:0:0,0,0	1/1:26,0:26:5.98:47,6,0	1/1:10,0:10:8.88:57,9,0	1/1:6,0:6:14.16:75,14,0	1/1:9,1:9:15.37:89,15,0	1/1:46,0:46:7.80:54,8,0	1/1:14,0:13:14.26:84,14,0	1/1:36,0:37:3:25,3,0	./.	1/1:5,2:8:5.95:44,6,0	1/1:30,0:30:12.29:72,12,0	1/1:30,0:30:62.11:351,62,0	1/1:31,0:31:24.30:136,24,0	1/1:7,0:7:4.72:22,5,0
chr10	39710886	.	A	AT	1689.78	PASS	AB=0.862;AC=15;AF=0.268;AN=56;BaseQRankSum=-1.449;DP=568;FS=0.455;HRun=13;HaplotypeScore=116.5772;InbreedingCoeff=0.3032;MQ=74.18;MQ0=9;MQRankSum=1.644;QD=7.28;ReadPosRankSum=0.468;VQSLOD=2.5297;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:22:33.28:0,33,102	0/0:9,0:9:14.83:0,15,103	0/1:47,0:19:13.28:13,0,55	0/0:47,0:23:9.64:0,10,99	1/1:11,4:15:21.02:193,21,0	0/0:17,0:19:45.63:0,46,300	0/0:22,0:22:37.79:0,38,253	0/0:32,0:32:47.69:0,48,316	0/0:10,0:10:16.84:0,17,108	0/0:28,0:28:55.63:0,56,363	0/0:18,0:18:11.69:0,12,195	0/1:10,0:11:18.50:59,0,18	0/0:6,0:17:24.98:0,25,76	0/0:3,0:10:14.24:0,14,41	0/1:12,5:17:25.29:199,0,25	1/1:12,6:19:40.75:350,41,0	1/1:24,5:28:28.78:393,29,0	0/0:11,0:11:10.42:0,10,171	0/0:23,0:21:7.78:0,8,197	0/1:24,2:26:9.58:10,0,210	0/0:15,0:15:29.64:0,30,204	0/1:10,4:14:16.65:142,0,17	1/1:8,5:13:3.31:160,3,0	0/1:15,8:23:10.65:293,0,11	0/1:14,1:15:52.44:52,0,114	0/0:19,1:19:21.50:0,21,282	0/0:27,0:26:25.09:0,25,248	0/0:5,0:4:5.91:0,6,41
chr10	39710901	.	GTTT	G	8082.04	PASS	AB=0.973;AC=53;AF=0.946;AN=56;BaseQRankSum=-5.744;DP=622;FS=2.777;HRun=15;HaplotypeScore=120.4132;InbreedingCoeff=0.5497;MQ=69.71;MQ0=21;MQRankSum=-3.005;QD=14.83;ReadPosRankSum=4.683;VQSLOD=3.5913;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,0:28:63.21:362,63,0	1/1:3,6:9:11.95:134,12,0	0/0:75,0:18:15.42:0,15,131	0/1:69,1:28:11.52:12,0,270	1/1:8,10:19:31.41:349,31,0	1/1:11,8:21:44.77:479,45,0	1/1:3,15:21:41.93:437,42,0	1/1:13,14:27:35.84:390,36,0	1/1:4,3:8:20.98:219,21,0	1/1:14,11:24:4.84:332,5,0	1/1:10,4:17:10.43:268,10,0	1/1:6,7:13:20.59:232,21,0	1/1:3,0:13:28.62:190,29,0	1/1:4,0:9:14.60:86,15,0	1/1:6,7:16:29.90:307,30,0	1/1:10,8:21:27.50:297,28,0	1/1:19,11:29:43.65:482,44,0	1/1:11,7:18:22.95:433,23,0	1/1:10,11:19:32.94:370,33,0	1/1:17,8:26:41.37:426,41,0	1/1:7,5:12:17.83:192,18,0	1/1:9,7:16:21.75:269,22,0	1/1:6,6:13:18.12:212,18,0	1/1:12,11:24:38.81:419,39,0	1/1:8,4:15:13.30:148,13,0	1/1:9,12:20:44.92:495,45,0	1/1:11,9:20:32.75:340,33,0	1/1:4,3:6:18.05:202,18,0
chr10	39710914	.	TTTC	T	1681.10	PASS	AB=0.982;AC=28;AF=0.500;AN=56;BaseQRankSum=-2.903;DP=577;FS=10.496;HRun=0;HaplotypeScore=141.7708;InbreedingCoeff=-0.3603;MQ=74.16;MQ0=21;MQRankSum=-4.647;QD=4.46;ReadPosRankSum=10.661;VQSLOD=0.1332;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:20.50:0,21,125	0/1:7,0:7:24.53:25,0,25	0/0:71,0:19:32.71:0,33,454	0/0:74,0:34:26.66:0,27,469	0/1:20,0:20:63.37:65,0,63	0/1:19,0:19:65.95:86,0,66	1/1:19,0:19:1.52:94,2,0	0/1:19,1:20:67.82:91,0,68	0/1:11,1:12:47.65:48,0,85	0/1:18,0:17:87.52:88,0,101	0/1:18,0:18:66.63:82,0,67	0/1:12,0:12:17.79:65,0,18	0/0:19,0:18:4.88:0,5,122	0/0:9,0:9:4.38:0,4,52	0/1:17,0:17:73.46:73,0,90	0/1:18,0:18:45.88:46,0,65	1/1:25,0:24:7.44:141,7,0	0/1:19,1:20:62.60:156,0,63	0/1:21,0:19:99:101,0,127	0/1:17,2:19:21.96:152,0,22	0/1:10,0:10:34.38:34,0,47	0/1:16,0:15:55.38:55,0,58	1/1:12,0:12:10.61:68,11,0	0/1:19,1:20:32.70:124,0,33	0/1:14,0:14:6.50:7,0,133	1/1:16,0:16:12.09:102,12,0	0/1:17,0:16:21.61:93,0,22	1/1:7,0:6:14.73:53,15,0
chr10	39710981	.	C	CA	24889.68	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-7.066;DP=615;FS=3.607;HRun=0;HaplotypeScore=67.1898;InbreedingCoeff=0.9916;MQ=89.29;MQ0=0;MQRankSum=-11.108;QD=43.82;ReadPosRankSum=7.943;VQSLOD=4.0568;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,33:33:93.32:1483,93,0	1/1:0,5:5:15.05:240,15,0	0/0:25,0:25:64.53:0,65,927	0/0:22,0:22:63.01:0,63,785	1/1:0,22:23:60.20:949,60,0	1/1:1,20:21:60.20:956,60,0	1/1:0,31:31:90.31:1439,90,0	1/1:1,15:16:45.15:720,45,0	1/1:0,17:17:48.16:767,48,0	1/1:1,27:28:81.28:1293,81,0	1/1:0,17:17:45.15:719,45,0	1/1:0,20:20:51.17:815,51,0	1/1:0,16:18:51.17:798,51,0	1/1:0,21:21:60.20:959,60,0	1/1:1,19:20:57.19:910,57,0	1/1:0,22:22:63.21:1007,63,0	1/1:0,28:27:69.24:1103,69,0	1/1:0,30:30:87.30:1389,87,0	1/1:0,27:27:78.24:1221,78,0	1/1:0,23:24:66.22:1039,66,0	1/1:2,21:23:51.17:815,51,0	1/1:0,18:18:48.16:767,48,0	1/1:0,20:20:53.84:862,54,0	1/1:1,31:32:90.31:1438,90,0	1/1:0,17:17:42.14:671,42,0	1/1:0,21:21:63.21:1006,63,0	1/1:2,23:25:66.22:1055,66,0	1/1:0,11:11:30.10:466,30,0
chr10	39711256	.	C	CAGACAGAG	3419.95	PASS	AB=0.921;AC=31;AF=0.646;AN=48;BaseQRankSum=-6.901;DP=712;FS=0.000;HRun=0;HaplotypeScore=199.5788;InbreedingCoeff=0.4259;MQ=60.44;MQ0=11;MQRankSum=3.430;QD=8.08;ReadPosRankSum=-5.708;VQSLOD=0.6752;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:56,0:57:27.39:27,0,125	1/1:5,3:8:3.01:121,3,0	./.	./.	1/1:23,0:22:3.01:74,3,0	0/0:23,0:23:18.03:0,18,274	0/0:19,0:19:0:0,0,0	./.	0/1:20,0:20:20.16:20,0,258	1/1:24,7:31:19.31:539,19,0	./.	0/0:7,0:19:17.98:0,18,255	0/0:14,0:25:14.89:0,15,274	0/0:11,0:21:17.99:0,18,309	1/1:19,4:22:3.01:121,3,0	1/1:11,4:19:3.01:121,3,0	1/1:26,0:27:12.51:358,13,0	0/1:18,5:25:13.11:14,0,13	1/1:13,0:16:15.05:322,15,0	1/1:18,7:27:2.75:17,3,0	1/1:31,0:30:12.01:172,12,0	1/1:17,0:18:2.68:105,3,0	0/0:10,0:18:6.96:0,7,114	0/0:17,0:25:3.01:0,3,56	1/1:11,3:14:3.01:121,3,0	1/1:27,4:32:12.93:354,13,0	1/1:21,6:32:14.97:553,15,0	1/1:12,4:16:11.97:380,12,0
chr10	39713667	.	A	AT	7331.87	PASS	AB=0.833;AC=54;AF=0.964;AN=56;BaseQRankSum=-1.714;DP=219;FS=9.238;HRun=5;HaplotypeScore=30.7512;InbreedingCoeff=0.1572;MQ=43.08;MQ0=0;MQRankSum=-1.732;QD=33.48;ReadPosRankSum=0.978;VQSLOD=4.3659;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,7:8:21.03:255,21,0	1/1:1,1:2:3.01:39,3,0	0/1:1,1:2:19.55:31,0,20	0/1:3,0:2:0:0,0,0	1/1:4,8:12:24.08:312,24,0	1/1:0,9:9:27.09:351,27,0	1/1:3,8:11:30.05:375,30,0	1/1:1,11:12:33.11:432,33,0	1/1:1,7:8:23.99:276,24,0	1/1:0,12:12:36.12:473,36,0	1/1:1,8:9:21.03:256,21,0	1/1:1,10:11:27.05:335,27,0	1/1:1,5:6:18.02:217,18,0	1/1:1,6:7:21.03:256,21,0	1/1:1,14:15:42.14:552,42,0	1/1:1,4:5:15.01:178,15,0	1/1:0,2:2:6.02:78,6,0	1/1:1,4:5:12.04:158,12,0	1/1:0,5:5:15.05:197,15,0	1/1:1,10:11:33.08:413,33,0	1/1:1,1:2:3.01:39,3,0	1/1:2,9:11:30.08:380,30,0	1/1:0,11:11:33.11:431,33,0	1/1:2,5:7:12.04:154,12,0	1/1:0,5:5:12.04:158,12,0	1/1:1,14:14:42.14:550,42,0	1/1:2,7:9:21.07:276,21,0	1/1:0,4:4:12.04:158,12,0
chr10	39713680	.	A	AG	2113.05	PASS	AB=0.726;AC=12;AF=0.214;AN=56;BaseQRankSum=-6.971;DP=354;FS=55.674;HRun=0;HaplotypeScore=87.1891;InbreedingCoeff=-0.3117;MQ=43.85;MQ0=1;MQRankSum=-6.588;QD=10.06;ReadPosRankSum=3.799;VQSLOD=1.6992;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:27.04:0,27,350	0/1:2,3:5:48.78:85,0,49	0/0:5,0:3:4.05:0,4,80	0/0:4,0:3:1.43:0,1,39	0/1:13,12:25:99:180,0,362	0/1:10,1:11:12.23:12,0,361	0/0:14,1:15:2.06:0,2,449	0/0:16,0:16:32.43:0,32,558	0/0:10,0:10:30.06:0,30,380	0/1:16,7:23:99:215,0,531	0/1:12,8:20:99:172,0,385	0/0:10,0:10:27.05:0,27,353	0/0:8,0:8:24.08:0,24,334	0/0:10,0:10:30.07:0,30,396	0/0:16,0:16:48.08:0,48,608	0/0:10,0:10:30.04:0,30,365	0/0:4,0:4:12.04:0,12,166	0/0:8,0:8:24:0,24,290	0/0:8,0:8:24.08:0,24,334	0/1:14,12:26:99:370,0,411	0/0:2,0:2:6.02:0,6,84	0/1:12,9:21:99:259,0,354	0/1:11,9:20:99:226,0,316	0/0:9,0:9:26.94:0,27,293	0/1:5,10:15:99:326,0,150	0/1:17,2:18:37.24:37,0,578	0/1:11,3:14:98.56:99,0,310	0/1:4,7:11:99:282,0,113
chr10	39713742	.	GC	G	9221.69	PASS	AB=0.942;AC=54;AF=0.964;AN=56;BaseQRankSum=-3.490;DP=330;FS=10.276;HRun=4;HaplotypeScore=60.6059;InbreedingCoeff=-0.0428;MQ=57.33;MQ0=4;MQRankSum=-3.090;QD=27.94;ReadPosRankSum=2.440;VQSLOD=3.9002;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,12:15:39.12:465,39,0	1/1:0,2:2:6.02:72,6,0	0/1:14,1:5:10.16:43,0,10	0/1:16,1:9:61.95:62,0,89	1/1:1,11:12:33.10:395,33,0	1/1:0,9:9:27.08:322,27,0	1/1:1,12:12:30.09:357,30,0	1/1:6,7:12:27.07:314,27,0	1/1:3,11:14:33.10:395,33,0	1/1:1,11:12:34.35:399,34,0	1/1:1,8:8:24.06:278,24,0	1/1:0,15:15:42.13:501,42,0	1/1:0,8:8:24.07:285,24,0	1/1:1,13:14:39.12:466,39,0	1/1:0,17:17:51.16:609,51,0	1/1:1,13:14:39.12:467,39,0	1/1:2,6:8:24:257,24,0	1/1:2,9:11:30.04:343,30,0	1/1:1,8:9:21.06:252,21,0	1/1:3,13:16:39.11:455,39,0	1/1:3,6:9:18.03:201,18,0	1/1:1,6:7:18.05:216,18,0	1/1:1,11:12:30.09:357,30,0	1/1:1,18:19:45.14:532,45,0	1/1:1,8:9:24.07:288,24,0	1/1:2,18:18:48.15:571,48,0	1/1:0,6:6:18.06:215,18,0	1/1:2,2:3:9.03:106,9,0
chr10	39713767	.	GA	G	5230.92	PASS	AB=0.800;AC=45;AF=0.804;AN=56;BaseQRankSum=-5.327;DP=360;FS=48.801;HRun=10;HaplotypeScore=84.2162;InbreedingCoeff=0.6450;MQ=66.67;MQ0=1;MQRankSum=-2.385;QD=17.38;ReadPosRankSum=-0.319;VQSLOD=1.9417;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,13:15:26.96:234,27,0	1/1:1,2:3:5.99:52,6,0	0/0:12,0:9:18.02:0,18,186	0/1:15,0:13:4.57:5,0,142	1/1:2,17:19:47.99:416,48,0	1/1:2,9:11:23.98:208,24,0	1/1:1,19:20:38.98:338,39,0	1/1:3,10:13:26.94:227,27,0	1/1:3,10:13:29.96:260,30,0	1/1:5,15:20:11.81:330,12,0	1/1:5,5:10:17.98:156,18,0	0/0:15,0:15:39.11:0,39,431	1/1:3,10:13:29.98:260,30,0	0/1:5,7:12:6.17:181,0,6	1/1:1,17:18:50.99:442,51,0	1/1:4,10:14:32.96:280,33,0	1/1:3,9:12:26.96:229,27,0	0/1:7,3:10:21.20:66,0,21	1/1:5,3:8:14.99:130,15,0	1/1:4,13:17:38.98:338,39,0	1/1:2,7:9:17.97:156,18,0	1/1:1,4:5:12:104,12,0	0/0:11,0:11:21.06:0,21,232	0/0:21,0:21:51.44:0,51,545	1/1:2,9:12:32.03:266,32,0	1/1:5,13:17:41.03:344,41,0	1/1:2,10:12:20.98:182,21,0	1/1:0,1:1:3:26,3,0
chr10	39713798	.	T	TG	889.04	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=3.128;DP=463;FS=3.742;HRun=7;HaplotypeScore=105.9012;InbreedingCoeff=0.9786;MQ=73.06;MQ0=0;MQRankSum=-3.549;QD=18.52;ReadPosRankSum=0.669;VQSLOD=2.9770;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:45.07:0,45,434	0/0:6,0:6:15.02:0,15,145	0/0:18,0:18:45.06:0,45,429	0/0:13,0:13:27.03:0,27,257	0/0:20,0:20:42.06:0,42,405	0/0:13,0:12:21.02:0,21,203	0/0:22,0:22:39.05:0,39,377	0/0:26,0:26:72.11:0,72,695	0/0:19,0:19:45.04:0,45,427	0/0:24,0:24:57.08:0,57,550	0/0:13,0:13:30.05:0,30,289	1/1:2,12:14:33.10:398,33,0	0/0:14,0:14:42.07:0,42,405	0/0:17,0:17:39:0,39,367	0/0:29,0:29:57.05:0,57,550	0/0:17,0:17:39.05:0,39,377	0/0:22,0:22:60.10:0,60,579	0/0:11,0:11:24.03:0,24,231	0/0:13,0:13:30.05:0,30,290	0/0:22,0:21:45.07:0,45,434	0/0:13,0:13:30.04:0,30,289	0/0:11,0:11:24.04:0,24,232	1/1:3,11:14:27.05:307,27,0	1/1:7,13:20:27.08:326,27,0	0/0:21,0:21:39.05:0,39,376	0/0:16,0:15:42.02:0,42,396	0/0:13,0:13:30.05:0,30,290	0/0:4,0:4:12.02:0,12,116
chr10	39714966	.	AT	A	2697.12	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=13.068;DP=733;FS=0.444;HRun=2;HaplotypeScore=75.7890;InbreedingCoeff=0.9999;MQ=80.83;MQ0=0;MQRankSum=-1.485;QD=34.14;ReadPosRankSum=2.563;VQSLOD=4.0464;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,144,2105	0/0:16,0:16:48.16:0,48,719	0/0:20,0:20:56.93:0,57,752	0/0:17,0:17:45.07:0,45,598	0/0:25,0:25:74.97:0,75,1066	0/0:20,0:20:57.19:0,57,853	0/0:23,0:23:69.22:0,69,1005	0/0:23,0:23:63.21:0,63,944	0/0:27,0:27:81.27:0,81,1214	0/0:29,0:29:87.29:0,87,1279	0/0:16,0:16:48.15:0,48,700	1/1:0,28:28:81.26:1049,81,0	0/0:29,0:29:87.27:0,87,1275	0/0:30,0:30:90.24:0,90,1246	0/0:26,0:26:78.24:0,78,1131	0/0:32,0:32:96.32:0,96,1428	0/0:23,0:23:69.23:0,69,1034	0/0:16,1:17:38.56:0,39,707	0/0:26,0:26:78.23:0,78,1124	0/0:35,0:35:99:0,105,1553	0/0:29,0:29:84.28:0,84,1252	0/0:36,0:36:99:0,108,1545	1/1:0,25:25:72.23:934,72,0	1/1:2,24:26:66.21:857,66,0	0/0:33,0:33:96.33:0,96,1437	0/0:33,0:33:99:0,99,1421	0/0:26,0:26:78.26:0,78,1164	0/0:15,0:15:33.09:0,33,473
chr10	39715641	.	CACCAAGGGATT	C	4615.95	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=10.676;DP=793;FS=2.716;HRun=0;HaplotypeScore=248.8711;InbreedingCoeff=0.9965;MQ=86.25;MQ0=0;MQRankSum=-11.033;QD=65.01;ReadPosRankSum=0.267;VQSLOD=4.6928;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,166,9028	0/0:9,0:9:27.09:0,27,1494	0/0:29,0:29:84.29:0,84,3999	0/0:26,0:26:78.27:0,78,3697	0/0:25,0:25:72.25:0,72,4090	0/0:23,0:23:66.21:0,66,3345	0/0:36,0:36:99:0,108,5683	0/0:28,0:28:81.25:0,81,3669	0/0:33,0:33:96.33:0,96,5247	0/0:48,0:48:99:0,141,7768	0/0:13,0:13:39.13:0,39,2235	1/1:0,27:27:81.28:2888,81,0	0/0:23,0:23:66.23:0,66,3560	0/0:28,0:28:81.28:0,81,4380	0/0:40,0:40:99:0,117,6591	0/0:29,0:29:87.30:0,87,4699	0/0:22,0:22:63.21:0,63,3417	0/0:25,0:25:75.26:0,75,4189	0/0:23,0:23:63.17:0,63,3209	0/0:25,0:25:69.24:0,69,3896	0/0:49,0:49:99:0,144,7716	0/0:25,0:25:72.24:0,72,3890	1/1:4,12:17:33.11:1087,33,0	1/1:7,20:27:17.92:641,18,0	0/0:32,0:32:89.87:0,90,4814	0/0:38,0:38:99:0,114,5717	0/0:27,0:25:81.28:0,81,4350	0/0:11,0:11:33.11:0,33,1743
chr10	39716089	.	G	GA	4462.28	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=-9.626;DP=502;FS=4.099;HRun=7;HaplotypeScore=53.8521;InbreedingCoeff=0.9171;MQ=62.68;MQ0=6;MQRankSum=1.724;QD=27.54;ReadPosRankSum=-2.870;VQSLOD=4.4488;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:84.13:0,84,811	0/0:9,0:9:21.03:0,21,202	0/0:15,0:10:20.70:0,21,182	0/1:7,0:5:12.27:12,0,63	0/0:13,0:13:23.72:0,24,231	0/0:13,0:13:30.05:0,30,290	0/0:34,0:33:75.08:0,75,712	1/1:2,19:21:57.14:669,57,0	0/0:15,0:15:42.07:0,42,406	0/0:23,0:23:60.09:0,60,576	0/0:13,0:13:29.98:0,30,282	0/0:15,0:15:45.07:0,45,434	0/0:11,0:10:24.03:0,24,232	0/0:14,0:14:36.06:0,36,347	0/0:17,0:17:48.08:0,48,463	0/0:9,0:9:24.04:0,24,231	0/0:27,0:27:66.06:0,66,624	0/0:33,0:33:87.13:0,87,839	1/1:5,19:23:63.18:738,63,0	1/1:3,14:18:42.12:488,42,0	1/1:3,10:13:24.07:290,24,0	0/0:17,0:17:45.05:0,45,429	0/0:17,0:16:42.04:0,42,398	0/0:12,0:12:35.85:0,36,332	1/1:4,24:28:69.21:826,69,0	1/1:3,13:15:39.11:461,39,0	1/1:6,19:25:51.16:616,51,0	1/1:0,10:10:30.09:362,30,0
chr10	39717472	.	TCA	T	4169.32	PASS	AB=0.852;AC=25;AF=0.446;AN=56;BaseQRankSum=-1.587;DP=663;FS=3.301;HRun=0;HaplotypeScore=169.3691;InbreedingCoeff=0.5909;MQ=51.34;MQ0=14;MQRankSum=5.117;QD=11.68;ReadPosRankSum=3.958;VQSLOD=3.7139;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,2:39:10.29:0,10,455	1/1:4,0:8:0.64:32,1,0	0/0:14,0:2:3.01:0,3,42	0/0:14,0:5:3.01:0,3,36	1/1:9,29:38:59.79:580,60,0	0/0:17,0:24:34.83:0,35,340	0/0:17,0:35:38.99:0,39,399	0/0:34,0:34:31.38:0,31,204	0/0:18,1:28:35.93:0,36,337	1/1:9,0:19:17.24:115,17,0	1/1:7,0:11:5.24:23,5,0	1/1:8,23:33:25.15:460,25,0	0/1:15,2:17:16:16,0,189	0/1:22,0:21:12.14:12,0,167	1/1:10,8:19:30.07:333,30,0	1/1:11,9:20:35.38:379,35,0	1/1:18,20:36:68.41:759,68,0	0/1:8,0:17:0.04:88,0,0	0/0:19,0:18:20.03:0,20,142	0/0:12,0:17:5.73:0,6,37	0/1:34,0:33:0.94:1,0,51	0/1:13,8:22:7.21:364,0,7	1/1:7,8:17:29.92:323,30,0	1/1:20,19:40:60.03:685,60,0	0/0:10,0:26:23.38:0,23,184	0/0:14,0:31:51.94:0,52,356	0/0:12,0:14:12.06:0,12,89	0/0:4,0:8:8.84:0,9,67
chr10	39717513	.	GAGAA	G	460.52	PASS	AB=0.865;AC=7;AF=0.125;AN=56;BaseQRankSum=1.144;DP=730;FS=25.798;HRun=0;HaplotypeScore=247.1890;InbreedingCoeff=0.5277;MQ=50.29;MQ0=22;MQRankSum=-3.428;QD=4.47;ReadPosRankSum=-0.517;VQSLOD=1.2067;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:16,14:30:12.83:237,13,0	0/0:8,0:8:12.72:0,13,271	0/0:40,0:15:42.03:0,42,986	0/0:47,0:17:30.72:0,31,611	0/0:38,0:37:85.30:0,85,1435	0/0:18,0:17:25.89:0,26,281	0/0:33,0:33:45.58:0,46,550	0/0:28,0:28:62.93:0,63,1558	0/0:27,0:26:26.87:0,27,453	0/0:26,0:26:60.52:0,61,1386	0/1:14,0:12:0.54:1,0,197	0/0:34,0:34:74.15:0,74,1533	0/1:6,13:19:27:227,0,27	1/1:2,16:17:4.31:110,4,0	0/0:22,0:22:46.22:0,46,820	0/0:24,0:24:59.37:0,59,979	0/0:34,0:32:68.60:0,69,1539	0/0:27,0:26:42.80:0,43,1199	0/0:17,0:16:38.01:0,38,764	0/0:22,0:22:14.93:0,15,427	0/1:22,0:22:0.52:1,0,396	0/0:28,0:28:40.88:0,41,940	0/0:18,0:18:45.02:0,45,853	0/0:44,0:44:99:0,111,2493	0/0:31,0:31:60.38:0,60,892	0/0:33,0:33:82.95:0,83,1594	0/0:15,0:16:35.96:0,36,644	0/0:12,0:12:36.06:0,36,722
chr10	39717523	.	GAA	G	2372.17	PASS	AB=0.982;AC=39;AF=0.696;AN=56;BaseQRankSum=3.516;DP=705;FS=8.126;HRun=3;HaplotypeScore=214.5025;InbreedingCoeff=0.2833;MQ=50.72;MQ0=17;MQRankSum=-0.774;QD=4.15;ReadPosRankSum=1.542;VQSLOD=-0.5983;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:30:11.37:104,11,0	1/1:10,0:10:7.22:33,7,0	0/0:34,0:14:39.11:0,39,649	0/0:41,1:17:26.70:0,27,334	1/1:34,0:33:12.82:63,13,0	1/1:9,7:16:23.94:308,24,0	1/1:16,14:30:35.09:422,35,0	1/1:22,0:22:1.95:5,2,0	1/1:8,19:27:48.62:529,49,0	1/1:24,0:25:2.61:29,3,0	1/1:17,0:15:4.37:37,4,0	0/1:32,0:32:73.99:108,0,74	1/1:19,0:19:18.02:130,18,0	1/1:17,1:17:3.73:20,4,0	1/1:22,0:22:14.45:72,14,0	1/1:25,0:25:22.44:123,22,0	1/1:35,0:35:15.99:80,16,0	1/1:27,1:27:27.66:184,28,0	0/1:14,0:14:33.49:41,0,33	0/1:22,0:22:24.82:40,0,25	0/1:24,0:24:49.58:50,0,63	1/1:25,0:25:2.97:26,3,0	0/0:14,1:15:8.47:0,8,105	0/1:42,0:42:12.42:12,0,292	0/0:30,0:30:20.98:0,21,180	0/1:35,1:36:72.78:73,0,141	0/1:16,2:17:64.43:64,0,124	0/0:12,0:12:17.30:0,17,223
chr10	39717525	.	AACAG	A	1179.03	PASS	AB=0.992;AC=17;AF=0.304;AN=56;BaseQRankSum=7.055;DP=698;FS=16.548;HRun=0;HaplotypeScore=231.1977;InbreedingCoeff=0.0816;MQ=50.95;MQ0=16;MQRankSum=-6.481;QD=3.55;ReadPosRankSum=-1.856;VQSLOD=1.0168;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:31,0:31:21.44:21,0,85	0/1:10,0:10:44.44:50,0,44	0/0:32,0:14:32.07:0,32,310	0/0:40,0:17:29.09:0,29,232	0/0:34,0:33:10.51:0,11,315	1/1:12,5:17:26.16:195,26,0	1/1:28,0:28:33.45:228,33,0	0/0:23,0:23:68.56:0,69,545	1/1:26,1:27:45.85:455,46,0	0/1:25,0:25:34.34:34,0,378	0/1:19,0:17:10.14:70,0,10	0/0:31,0:31:55.46:0,55,788	0/1:20,0:20:36.44:36,0,66	0/0:16,0:15:1.36:0,1,9	0/1:22,0:22:43.76:44,0,149	0/1:25,0:25:41.63:42,0,158	0/1:36,0:36:17.42:17,0,344	0/1:27,0:26:99:144,0,210	0/0:14,0:14:18.89:0,19,398	0/0:21,0:21:23.43:0,23,268	0/0:22,0:22:26.23:0,26,409	0/1:25,1:26:13.35:13,0,217	0/0:14,0:14:32.99:0,33,464	0/0:42,0:42:98.79:0,99,1483	0/0:29,0:29:26.96:0,27,497	0/0:36,0:36:41.88:0,42,1003	0/1:18,0:17:2.28:2,0,372	0/0:12,0:12:35.82:0,36,683
chr10	39717527	.	CAGAGAGAGAGAG	C	3148.47	PASS	AB=0.940;AC=15;AF=0.278;AN=54;BaseQRankSum=4.996;DP=704;FS=11.069;HRun=0;HaplotypeScore=295.7263;InbreedingCoeff=0.7190;MQ=50.86;MQ0=15;MQRankSum=-7.841;QD=13.75;ReadPosRankSum=-1.819;VQSLOD=0.8324;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:1.61:0,2,356	0/0:5,0:10:9.45:0,9,125	./.	0/0:38,0:17:0:0,0,0	1/1:28,4:32:16.48:304,16,0	0/1:16,0:17:25.27:110,0,25	0/1:24,0:28:7.37:199,0,7	0/0:24,0:24:24.07:0,24,474	1/1:18,2:26:18.74:600,19,0	0/0:23,0:26:34.84:0,35,887	0/0:10,0:16:12.04:0,12,316	0/0:31,0:31:45.63:0,46,1845	0/0:20,0:20:20.62:0,21,506	0/1:15,0:14:0:0,0,0	1/1:12,10:22:18.06:556,18,0	1/1:14,13:27:23.36:746,23,0	1/1:23,12:35:17.16:512,17,0	0/0:19,0:26:53.84:0,54,1376	0/0:17,0:17:30.04:0,30,817	0/0:22,0:22:23.52:0,24,898	0/0:24,0:24:36.12:0,36,1264	1/1:22,1:26:16.86:302,17,0	0/0:15,0:15:18.06:0,18,878	0/0:41,0:42:68.52:0,69,3155	0/0:29,0:30:30.06:0,30,1282	0/0:38,0:39:66.18:0,66,2371	0/0:18,0:17:21.07:0,21,903	0/0:12,0:12:30.10:0,30,1477
chr10	39718560	.	GA	G	6088.80	PASS	AC=42;AF=0.913;AN=46;BaseQRankSum=1.551;DP=206;FS=0.000;HRun=1;HaplotypeScore=142.2653;InbreedingCoeff=0.3881;MQ=33.79;MQ0=0;MQRankSum=-1.732;QD=30.29;ReadPosRankSum=0.668;VQSLOD=4.5179;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,25:25:60.20:828,60,0	./.	0/0:1,0:1:3.01:0,3,40	./.	1/1:0,7:7:2.26:40,2,0	./.	1/1:0,29:29:84.11:1095,84,0	1/1:0,8:8:18.06:251,18,0	1/1:0,3:3:9.03:124,9,0	1/1:0,3:3:9.03:119,9,0	0/0:0,3:3:0.47:0,0,1	1/1:0,2:2:6.02:83,6,0	1/1:0,2:2:6.02:83,6,0	1/1:0,10:10:27.09:374,27,0	1/1:0,8:8:24.08:334,24,0	1/1:0,1:1:3.01:42,3,0	1/1:0,15:15:27.09:376,27,0	1/1:1,13:14:35.85:473,36,0	1/1:0,6:6:18.06:251,18,0	./.	1/1:0,27:27:22.05:288,22,0	1/1:0,3:3:9.03:125,9,0	1/1:0,1:1:3.01:42,3,0	1/1:0,17:17:31.51:420,32,0	1/1:0,9:9:21.07:292,21,0	1/1:0,6:6:18.06:241,18,0	1/1:0,5:5:15.05:209,15,0	./.
chr10	39718569	.	GT	G	5387.20	PASS	AC=42;AF=0.955;AN=44;BaseQRankSum=1.538;DP=216;FS=0.000;HRun=3;HaplotypeScore=150.3439;InbreedingCoeff=0.1655;MQ=36.36;MQ0=0;MQRankSum=-1.625;QD=25.53;ReadPosRankSum=1.431;VQSLOD=4.0859;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,22:25:45.06:689,45,0	./.	./.	./.	1/1:0,6:6:1.79:35,2,0	./.	1/1:3,29:32:83.98:947,84,0	1/1:2,7:9:23.93:245,24,0	1/1:0,4:4:12.02:134,12,0	1/1:1,3:4:12.03:139,12,0	0/0:1,2:3:0:0,0,0	1/1:0,2:2:6.02:74,6,0	1/1:0,2:2:6.02:74,6,0	1/1:0,10:10:30.04:351,30,0	1/1:0,8:8:24.03:278,24,0	1/1:0,1:1:3.01:37,3,0	1/1:2,14:16:27.03:304,27,0	1/1:2,15:17:51.04:569,51,0	1/1:1,8:9:27.08:323,27,0	./.	1/1:1,24:25:17.58:189,18,0	1/1:0,3:3:3.01:37,3,0	1/1:0,1:1:3.01:37,3,0	1/1:4,15:19:32.05:369,32,0	1/1:1,7:8:20.98:224,21,0	1/1:1,5:6:15.05:185,15,0	1/1:0,4:4:12.04:148,12,0	./.
chr10	39718603	.	T	TC	6362.09	PASS	AC=46;AF=0.958;AN=48;BaseQRankSum=-1.732;DP=236;FS=0.000;HRun=5;HaplotypeScore=105.1704;InbreedingCoeff=0.1408;MQ=53.68;MQ0=0;MQRankSum=0.905;QD=27.42;ReadPosRankSum=1.710;VQSLOD=4.3350;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,15:20:39.09:527,39,0	./.	./.	0/0:1,0:1:0.47:0,0,1	1/1:1,7:8:2.58:43,3,0	./.	1/1:4,26:30:66.21:930,66,0	1/1:2,1:3:6.02:85,6,0	1/1:1,4:5:12.04:173,12,0	1/1:1,10:11:27.09:381,27,0	1/1:2,0:2:3.01:36,3,0	1/1:0,5:5:12.01:151,12,0	1/1:0,1:1:3.01:43,3,0	1/1:0,6:6:18.06:258,18,0	1/1:1,5:6:18.06:255,18,0	1/1:1,0:1:3.01:43,3,0	1/1:2,16:18:36.12:510,36,0	1/1:2,17:19:42.14:604,42,0	1/1:2,8:10:21.01:259,21,0	1/1:0,4:4:6.02:79,6,0	1/1:4,24:28:34.05:492,34,0	1/1:0,1:1:3.01:43,3,0	1/1:1,4:5:8.99:117,9,0	1/1:3,16:19:32.89:457,33,0	1/1:3,5:8:18.05:233,18,0	1/1:1,17:18:39.01:515,39,0	1/1:0,4:4:9.03:129,9,0	./.
chr10	39718965	.	A	ACCTGGGTCAGTCC	13362.12	PASS	AB=0.733;AC=11;AF=0.196;AN=56;BaseQRankSum=1.665;DP=451;FS=9.644;HRun=0;HaplotypeScore=189.8881;InbreedingCoeff=0.8123;MQ=78.91;MQ0=0;MQRankSum=-13.376;QD=128.48;ReadPosRankSum=-0.791;VQSLOD=4.3214;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:16,5:22:51.05:2594,51,0	0/0:5,0:5:8.95:0,9,343	0/0:14,0:14:32.83:0,33,908	0/0:12,0:12:24.04:0,24,632	0/0:5,0:5:12.04:0,12,446	0/0:28,0:28:60.19:0,60,2195	0/0:24,0:24:54.12:0,54,1735	0/0:21,0:21:45.13:0,45,1376	0/0:20,0:20:48.15:0,48,1628	0/0:14,0:14:33.11:0,33,1258	0/0:4,0:4:6.02:0,6,229	1/1:12,7:19:54.12:2711,54,0	1/1:10,5:15:42.09:1844,42,0	1/1:11,4:16:39.13:2254,39,0	0/0:12,0:12:27.09:0,27,1030	0/0:14,0:14:36.12:0,36,1333	0/0:30,0:29:69.24:0,69,2581	0/0:27,0:27:60.19:0,60,2125	0/0:15,0:15:30.07:0,30,900	0/0:3,0:3:6.01:0,6,133	0/0:39,0:39:99:0,99,3332	0/0:7,0:7:18.06:0,18,685	1/1:7,2:10:18.06:983,18,0	0/1:14,8:22:54.24:2977,0,54	0/0:8,0:8:18.06:0,18,608	0/0:19,0:19:51.17:0,51,1640	0/0:23,0:22:60.66:0,61,2148	0/0:3,0:3:9.03:0,9,277
chr10	39719003	.	A	AC	14970.78	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-7.530;DP=550;FS=10.630;HRun=6;HaplotypeScore=82.7042;InbreedingCoeff=0.8995;MQ=90.68;MQ0=0;MQRankSum=-10.687;QD=30.18;ReadPosRankSum=6.876;VQSLOD=4.1440;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,32:35:84.23:1038,84,0	1/1:1,4:5:6.02:75,6,0	0/0:30,0:30:75.11:0,75,741	0/0:24,0:24:71.18:0,71,653	1/1:0,7:7:12.04:150,12,0	1/1:2,26:28:69.22:868,69,0	1/1:5,28:33:84.26:1048,84,0	1/1:9,19:28:52.93:677,53,0	1/1:3,18:21:45.14:566,45,0	1/1:3,11:14:30.10:377,30,0	1/1:1,5:6:12.04:151,12,0	1/1:0,17:17:45.14:564,45,0	1/1:3,12:16:39.08:473,39,0	1/1:4,10:14:30.05:359,30,0	1/1:0,11:11:30.10:378,30,0	1/1:0,20:20:54.17:679,54,0	1/1:1,32:33:90.29:1132,90,0	1/1:2,21:23:60.19:755,60,0	1/1:5,17:22:48.11:575,48,0	1/1:0,8:8:21.07:264,21,0	1/1:4,37:41:99:1245,99,0	1/1:1,5:6:18.06:222,18,0	1/1:1,8:9:24.08:300,24,0	1/1:2,23:25:57.14:698,57,0	1/1:1,12:13:30.09:368,30,0	1/1:1,25:26:69.22:863,69,0	1/1:1,28:28:81.25:1010,81,0	1/1:1,5:6:12:133,12,0
chr10	39719413	.	T	TC	4598.89	PASS	AB=1.000;AC=53;AF=0.946;AN=56;BaseQRankSum=6.285;DP=531;FS=0.748;HRun=0;HaplotypeScore=329.7620;InbreedingCoeff=0.3548;MQ=78.30;MQ0=0;MQRankSum=-10.293;QD=9.02;ReadPosRankSum=8.219;VQSLOD=4.0054;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:35,0:35:77.59:348,78,0	1/1:10,0:10:26.43:109,26,0	0/0:21,0:21:1.05:0,1,82	0/1:22,0:22:15.79:16,0,37	1/1:19,0:19:34.98:164,35,0	1/1:12,0:12:24.49:105,24,0	1/1:18,0:18:19.74:141,20,0	1/1:19,0:19:26.63:112,27,0	1/1:13,0:13:27.43:133,27,0	1/1:17,0:17:8.19:98,8,0	1/1:18,2:20:45.49:261,45,0	1/1:26,0:26:58.58:272,59,0	1/1:25,0:25:62.43:282,62,0	1/1:21,0:21:46.08:205,46,0	1/1:26,0:24:60.41:272,60,0	1/1:19,0:19:38.56:177,39,0	1/1:20,0:20:43.78:177,44,0	1/1:9,0:9:8.86:35,9,0	1/1:18,0:18:11.97:70,12,0	1/1:22,2:24:57.77:279,58,0	1/1:15,0:15:30.44:136,30,0	1/1:17,0:17:40.61:193,41,0	1/1:15,0:15:31.22:153,31,0	1/1:14,0:13:19.85:92,20,0	1/1:26,0:26:53.96:244,54,0	1/1:20,1:21:49.77:228,50,0	1/1:24,0:24:61.29:261,61,0	1/1:5,0:5:10.31:36,10,0
chr10	39720729	.	TAC	T	4976.32	PASS	AB=0.763;AC=18;AF=0.321;AN=56;BaseQRankSum=16.457;DP=919;FS=4.595;HRun=0;HaplotypeScore=155.9210;InbreedingCoeff=0.8613;MQ=55.24;MQ0=21;MQRankSum=3.184;QD=14.94;ReadPosRankSum=6.406;VQSLOD=4.1402;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:22,27:49:51.41:594,51,0	0/0:11,0:11:30.10:0,30,433	0/0:31,0:9:9.92:0,10,126	0/0:23,0:5:9.03:0,9,136	0/0:37,0:37:93.29:0,93,1449	1/1:3,19:21:33.10:406,33,0	1/1:8,26:34:42.10:500,42,0	0/0:52,0:52:99:0,113,1622	1/1:2,36:36:45.14:553,45,0	0/0:31,0:31:87.28:0,87,1350	0/0:22,0:22:57.18:0,57,880	1/1:8,27:34:63.19:731,63,0	1/1:13,26:41:69.25:763,69,0	1/1:8,22:31:41.83:481,42,0	0/0:37,0:37:95.87:0,96,1453	0/0:31,0:31:41.29:0,41,1089	0/0:30,0:30:53.92:0,54,814	0/0:37,0:37:80.28:0,80,1258	0/1:14,1:12:15.86:16,0,216	0/0:33,1:34:47.02:0,47,1167	0/0:79,1:78:99:0,127,2956	0/0:27,0:27:66.22:0,66,1012	0/1:6,14:20:0.52:291,0,1	1/1:24,22:47:37.11:640,37,0	0/0:28,0:28:75.26:0,75,1201	0/0:28,0:28:68.69:0,69,997	0/0:39,1:39:43.43:0,43,1204	0/0:7,0:6:18.06:0,18,284
chr10	39720747	.	TACAC	T	1011.53	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=16.303;DP=964;FS=0.390;HRun=0;HaplotypeScore=217.3744;InbreedingCoeff=0.9952;MQ=54.66;MQ0=15;MQRankSum=1.096;QD=4.27;ReadPosRankSum=0.506;VQSLOD=2.5286;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:45,2:46:27.30:167,27,0	0/0:15,0:15:41.98:0,42,832	0/0:30,0:14:36.03:0,36,488	0/0:31,0:10:30.03:0,30,526	0/0:37,0:37:99:0,104,2547	0/0:23,0:22:42.14:0,42,627	0/0:35,0:35:60.19:0,60,908	0/0:56,0:56:99:0,150,2871	0/0:38,0:36:48.16:0,48,713	0/0:32,0:32:93.28:0,93,2161	0/0:24,0:24:66.21:0,66,1624	1/1:39,1:39:44.04:229,44,0	1/1:39,0:39:56.32:304,56,0	1/1:33,3:36:27.78:220,28,0	0/0:38,0:38:99:0,108,2518	0/0:32,0:32:87.28:0,87,2095	0/0:27,0:27:57.18:0,57,1399	0/0:39,0:39:76.88:0,77,2372	0/0:15,0:13:33.10:0,33,614	0/0:33,0:33:93.32:0,93,2365	0/0:90,1:88:99:0,231,5449	0/0:27,0:27:75.19:0,75,1600	1/1:26,1:27:23.89:109,24,0	1/1:47,1:48:14.81:169,15,0	0/0:34,0:34:93.23:0,93,2293	0/0:27,0:27:75.24:0,75,1708	0/0:34,0:33:90.29:0,90,2218	0/0:8,0:8:24.08:0,24,579
chr10	39720785	.	T	TAC	5125.85	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=1.207;DP=1021;FS=10.222;HRun=0;HaplotypeScore=165.6957;InbreedingCoeff=0.9789;MQ=55.17;MQ0=16;MQRankSum=1.733;QD=22.19;ReadPosRankSum=0.545;VQSLOD=5.1753;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,27:36:38.51:637,39,0	0/0:14,0:14:39.13:0,39,507	0/0:66,0:34:59.21:0,59,641	0/0:47,0:18:28.33:0,28,352	0/0:37,0:37:93.27:0,93,1178	0/0:20,0:20:39.11:0,39,490	0/0:26,0:26:43.60:0,44,582	0/0:57,0:55:99:0,126,1511	0/0:38,0:37:63.20:0,63,812	0/0:28,0:28:78.24:0,78,998	0/0:20,0:21:50.96:0,51,606	1/1:14,23:37:56.63:900,57,0	1/1:7,30:38:72.10:1126,72,0	1/1:11,27:38:6.32:624,6,0	0/0:32,0:32:75.21:0,75,945	0/0:34,0:34:87.28:0,87,1125	0/0:30,0:30:66.23:0,66,810	0/0:38,0:38:84.80:0,85,1177	0/0:22,0:18:29.95:0,30,354	0/0:42,0:42:93.26:0,93,1259	0/0:101,0:100:99:0,210,2637	0/0:20,0:20:60.17:0,60,752	1/1:6,28:34:57.16:913,57,0	1/1:8,39:47:24.20:926,24,0	0/0:38,0:38:78.24:0,78,999	0/0:30,0:29:78.22:0,78,968	0/0:33,0:33:75.23:0,75,949	0/0:16,0:16:33.09:0,33,412
chr10	39720845	.	T	TAC	5650.36	PASS	AB=0.563;AC=15;AF=0.268;AN=56;BaseQRankSum=-12.180;DP=919;FS=0.359;HRun=0;HaplotypeScore=130.8008;InbreedingCoeff=0.8895;MQ=55.62;MQ0=23;MQRankSum=-0.778;QD=18.77;ReadPosRankSum=-1.303;VQSLOD=4.7297;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:39:68.39:0,68,780	0/0:7,0:7:18.01:0,18,199	0/0:28,0:8:5.67:0,6,35	0/0:37,0:10:5.95:0,6,42	0/0:27,0:27:55.97:0,56,626	0/0:23,0:23:60.16:0,60,699	0/0:28,0:27:68.99:0,69,772	1/1:30,23:49:43.98:895,44,0	0/0:37,0:39:71.20:0,71,977	0/0:34,0:34:72.18:0,72,846	0/0:18,0:18:45.11:0,45,519	0/0:30,0:30:63.55:0,64,715	0/0:33,0:32:68.35:0,68,772	0/0:30,0:30:51.14:0,51,597	0/0:39,0:40:99:0,111,1281	0/0:34,0:34:63.55:0,64,821	0/0:38,0:40:80.69:0,81,1040	0/0:30,0:29:75.19:0,75,877	1/1:9,12:17:41.25:500,41,0	1/1:9,21:30:29.72:479,30,0	1/1:32,66:98:18.08:1221,18,0	0/0:29,0:30:46.56:0,47,748	0/0:27,0:27:42.09:0,42,484	0/0:43,0:43:75.14:0,75,871	1/1:4,14:18:26.90:432,27,0	1/1:7,24:32:72.19:1050,72,0	1/1:8,20:29:42.61:672,43,0	0/1:4,14:18:5.88:402,0,6
chr10	39722086	.	A	ATTT	3777.39	PASS	AB=0.841;AC=52;AF=0.929;AN=56;BaseQRankSum=-0.031;DP=462;FS=0.000;HRun=18;HaplotypeScore=122.3201;InbreedingCoeff=0.1566;MQ=69.60;MQ0=2;MQRankSum=-3.398;QD=8.62;ReadPosRankSum=-0.750;VQSLOD=-0.4494;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:12,0:12:18.06:237,18,0	1/1:8,0:8:6.02:83,6,0	0/1:33,0:17:15.62:29,0,16	0/0:24,0:13:3.35:0,3,26	1/1:24,0:23:22.01:222,22,0	1/1:8,6:20:13.28:169,13,0	0/1:8,5:15:3.88:160,0,4	1/1:33,0:30:17.68:190,18,0	1/1:8,0:17:11.80:106,12,0	1/1:25,0:22:21.43:256,21,0	1/1:12,0:12:10.59:133,11,0	1/1:8,0:7:12.04:164,12,0	1/1:5,0:5:6.60:51,7,0	1/1:10,0:10:6.70:49,7,0	1/1:11,0:10:9.03:122,9,0	1/1:12,0:12:11.05:117,11,0	1/1:27,0:27:15.52:195,16,0	1/1:13,0:11:3.01:41,3,0	1/1:16,0:15:13.59:171,14,0	1/1:15,0:15:15.93:198,16,0	1/1:5,0:5:6.88:65,7,0	1/1:10,0:10:9.03:127,9,0	1/1:16,1:22:24.94:281,25,0	1/1:10,0:16:7.57:84,8,0	1/1:28,0:28:24.15:265,24,0	1/1:23,0:23:10.54:95,11,0	1/1:9,0:9:5.45:48,5,0	1/1:9,0:8:9.92:119,10,0
chr10	39722872	.	TG	T	11547.08	PASS	AB=0.826;AC=55;AF=0.982;AN=56;BaseQRankSum=-2.974;DP=421;FS=0.000;HRun=5;HaplotypeScore=53.9281;InbreedingCoeff=-0.0204;MQ=56.65;MQ0=1;MQRankSum=-0.922;QD=27.43;ReadPosRankSum=2.334;VQSLOD=4.5481;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,21:23:48.13:544,48,0	1/1:0,6:6:18.05:204,18,0	1/1:12,13:18:30.92:415,31,0	0/1:15,4:11:34.21:116,0,34	1/1:1,18:19:48.14:544,48,0	1/1:1,16:17:45.09:496,45,0	1/1:1,12:13:33.09:373,33,0	1/1:3,25:28:75.21:850,75,0	1/1:0,11:11:30.09:340,30,0	1/1:2,17:19:51.15:578,51,0	1/1:1,11:12:30.09:340,30,0	1/1:1,7:8:21.06:238,21,0	1/1:1,10:11:27.04:292,27,0	1/1:0,6:6:12.03:136,12,0	1/1:1,15:16:39.11:442,39,0	1/1:0,10:10:30.09:339,30,0	1/1:1,14:15:39.11:442,39,0	1/1:1,9:10:24.07:272,24,0	1/1:4,17:21:51.14:578,51,0	1/1:1,11:12:36.10:408,36,0	1/1:0,8:8:21.06:238,21,0	1/1:0,24:24:63.18:714,63,0	1/1:0,9:9:24.07:272,24,0	1/1:2,13:15:39.11:442,39,0	1/1:2,11:13:33.09:374,33,0	1/1:0,26:26:75.19:839,75,0	1/1:1,16:17:45.13:516,45,0	1/1:1,6:7:18.05:204,18,0
chr10	39722990	.	C	CAGAGACAAATTCTG	2450.99	PASS	AB=0.708;AC=22;AF=0.917;AN=24;BaseQRankSum=-1.704;DP=34;FS=7.164;HRun=0;HaplotypeScore=25.5550;InbreedingCoeff=-0.2346;MQ=172.94;MQ0=0;MQRankSum=-0.374;QD=76.59;ReadPosRankSum=0.790;VQSLOD=1.8142;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/1:5,1:10:8.36:1368,0,8	0/1:4,0:6:26.25:234,0,26	./.	./.	1/1:3,0:3:6.02:154,6,0	1/1:3,0:3:9.02:159,9,0	1/1:1,0:1:3:25,3,0	./.	./.	1/1:1,0:1:3.01:74,3,0	1/1:2,0:2:6:97,6,0	./.	./.	./.	./.	1/1:1,0:1:3.01:168,3,0	./.	./.	1/1:2,0:2:6.02:84,6,0	./.	1/1:1,0:1:3.01:74,3,0	./.	./.	1/1:1,0:1:3:27,3,0	1/1:1,0:1:3.01:72,3,0	./.
chr10	39723677	.	AACACACAC	A	1468.09	PASS	AB=0.916;AC=28;AF=0.560;AN=50;BaseQRankSum=4.683;DP=527;FS=13.874;HRun=0;HaplotypeScore=112.5579;InbreedingCoeff=0.2785;MQ=53.08;MQ0=20;MQRankSum=-2.979;QD=5.69;ReadPosRankSum=-3.082;VQSLOD=0.7157;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:39:36.03:0,36,517	./.	./.	./.	0/1:12,0:12:14.62:15,0,35	0/1:8,1:14:25.62:83,0,26	0/0:26,0:25:5.52:0,6,58	0/0:24,0:24:0:0,0,0	1/1:9,1:9:6.02:130,6,0	0/0:15,0:14:3.28:0,3,9	1/1:5,0:5:3.01:74,3,0	0/0:16,0:16:21.07:0,21,780	0/1:15,0:15:2.20:2,0,109	0/1:16,0:15:8.98:9,0,51	1/1:18,2:18:15.05:303,15,0	1/1:14,0:13:6.02:118,6,0	1/1:17,0:20:9.03:175,9,0	1/1:12,0:12:6.02:123,6,0	1/1:21,0:21:2.37:8,2,0	1/1:9,4:13:3.01:74,3,0	0/0:29,0:25:2.99:0,3,23	1/1:10,5:14:11.83:235,12,0	0/0:10,0:13:3.01:0,3,122	0/0:30,0:39:39.13:0,39,1083	0/1:17,6:22:17.94:68,0,18	0/1:21,0:21:1.56:55,0,2	1/1:11,1:12:3.01:74,3,0	1/1:11,0:10:6:75,6,0
chr10	39724085	.	C	CG	120.22	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=3.177;DP=538;FS=11.034;HRun=0;HaplotypeScore=73.2632;InbreedingCoeff=0.8228;MQ=86.08;MQ0=5;MQRankSum=-1.593;QD=17.17;ReadPosRankSum=-2.362;VQSLOD=4.7873;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:90.29:0,90,1238	0/0:5,0:5:15.05:0,15,209	0/0:28,0:28:84.27:0,84,1134	0/0:25,0:25:71.04:0,71,958	0/0:21,0:21:60.18:0,60,807	1/1:0,1:1:3.01:47,3,0	1/1:0,5:5:9.03:139,9,0	0/0:28,0:28:77.62:0,78,1056	1/1:0,1:1:3.01:47,3,0	0/0:26,0:26:78.24:0,78,1053	0/0:10,0:10:30.10:0,30,419	0/0:22,0:22:63.20:0,63,864	0/0:10,0:10:30.10:0,30,419	0/0:20,0:20:57.15:0,57,742	0/0:32,0:29:72.24:0,72,1000	0/0:31,0:31:87.29:0,87,1211	0/0:41,0:40:99:0,114,1533	0/0:26,0:26:69.22:0,69,943	0/0:22,0:22:66.22:0,66,922	0/0:8,0:8:24.07:0,24,319	0/0:31,0:31:90.26:0,90,1221	0/0:24,0:22:57.18:0,57,777	0/0:11,0:11:27.09:0,27,376	0/0:20,0:20:30.07:0,30,394	0/0:11,0:11:27.07:0,27,358	0/0:19,0:19:54.15:0,54,703	0/0:23,0:22:51.17:0,51,705	0/0:6,0:6:15.05:0,15,210
chr10	39724122	.	T	TC	1884.59	PASS	AB=0.879;AC=34;AF=0.708;AN=48;BaseQRankSum=2.751;DP=432;FS=7.681;HRun=11;HaplotypeScore=87.1785;InbreedingCoeff=0.4853;MQ=73.90;MQ0=6;MQRankSum=-3.302;QD=5.11;ReadPosRankSum=3.294;VQSLOD=1.5073;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:24:18.55:131,19,0	0/1:5,1:6:0:0,0,0	0/0:20,0:17:31.82:0,32,226	0/0:18,0:15:27.33:0,27,205	1/1:20,0:20:32.34:205,32,0	./.	./.	0/1:7,3:10:0:0,0,0	./.	1/1:8,7:16:5.58:53,6,0	0/0:6,4:10:5.94:0,6,43	1/1:17,0:17:11.15:72,11,0	1/1:10,0:10:1.09:4,1,0	1/1:12,0:12:13.34:105,13,0	1/1:33,0:30:67.30:321,67,0	1/1:29,0:30:56.39:272,56,0	1/1:36,0:38:73.95:404,74,0	1/1:9,8:17:9.02:91,9,0	1/1:15,0:14:5.97:50,6,0	0/1:9,0:9:0:0,0,0	0/1:25,1:26:41.51:42,0,50	1/1:22,0:22:24.94:194,25,0	1/1:7,0:11:4.09:32,4,0	1/1:28,0:28:5.83:33,6,0	0/0:4,7:11:2.98:0,3,23	0/1:7,0:7:0.04:0,0,0	0/1:8,7:14:15.79:16,0,37	./.
chr10	39724130	.	C	CA	3766.91	PASS	AC=10;AF=0.208;AN=48;BaseQRankSum=4.536;DP=436;FS=34.357;HRun=0;HaplotypeScore=76.6129;InbreedingCoeff=0.8563;MQ=77.13;MQ0=6;MQRankSum=-0.461;QD=25.80;ReadPosRankSum=11.913;VQSLOD=0.8298;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:32.88:0,33,247	0/0:5,0:5:9:0,9,80	0/0:25,0:21:42.39:0,42,518	0/0:25,0:22:27.41:0,27,491	1/1:17,2:19:28.41:399,28,0	./.	./.	0/0:10,0:10:17.95:0,18,144	./.	0/0:15,0:15:7.03:0,7,153	0/0:8,0:8:9.02:0,9,108	0/0:16,0:16:19.85:0,20,140	0/0:16,0:16:30.37:0,30,241	0/0:9,0:9:7.85:0,8,58	1/1:0,33:31:72.11:870,72,0	1/1:1,26:27:65.97:789,66,0	1/1:4,39:42:63.50:1119,63,0	0/0:15,0:15:7.57:0,8,100	0/0:7,0:6:13.02:0,13,133	0/0:10,0:10:23.90:0,24,196	0/0:29,0:29:51.56:0,52,497	1/1:4,19:21:45.71:590,46,0	0/0:10,0:10:3.07:0,3,39	0/0:30,0:30:10.58:0,11,63	0/0:11,0:11:12.01:0,12,121	0/0:11,0:11:23.99:0,24,207	0/0:16,0:15:27.45:0,27,245	./.
chr10	39724132	.	C	CCCA	1257.66	PASS	AB=1.000;AC=24;AF=0.500;AN=48;BaseQRankSum=6.325;DP=459;FS=1.060;HRun=0;HaplotypeScore=131.6016;InbreedingCoeff=0.3261;MQ=77.26;MQ0=6;MQRankSum=-1.558;QD=3.80;ReadPosRankSum=6.502;VQSLOD=1.8228;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:19,0:19:37.14:100,0,37	0/1:5,0:5:0.04:0,0,0	0/0:26,0:22:19.67:0,20,309	0/0:25,0:23:22.66:0,23,369	1/1:2,0:19:31.77:147,32,0	./.	./.	0/0:9,0:9:2.95:0,3,26	./.	0/1:17,0:17:36.72:37,0,86	0/0:11,0:11:8.95:0,9,89	1/1:14,0:23:12.04:83,12,0	0/0:15,0:15:20.01:0,20,133	0/1:8,0:8:5.68:89,0,6	1/1:33,0:30:55.57:202,56,0	1/1:28,0:28:44.63:187,45,0	1/1:44,0:43:21.92:169,22,0	0/1:14,0:14:10.22:10,0,30	0/1:7,0:6:15.18:15,0,76	0/0:12,0:12:8.91:0,9,75	0/1:29,0:29:48.12:48,0,205	1/1:23,0:21:30.79:148,31,0	1/1:9,0:9:6.47:56,6,0	1/1:7,18:39:6.49:127,6,0	0/0:15,0:15:8.98:0,9,76	0/0:11,0:11:14.22:0,14,131	0/1:14,0:13:9.73:10,0,125	./.
chr10	39729195	.	AAC	A	628.71	PASS	AB=0.788;AC=27;AF=0.711;AN=38;BaseQRankSum=0.314;DP=432;FS=3.478;HRun=0;HaplotypeScore=72.0612;InbreedingCoeff=0.2355;MQ=47.47;MQ0=43;MQRankSum=-0.942;QD=2.70;ReadPosRankSum=-0.587;VQSLOD=1.7836;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:5,0:3:2.84:0,3,14	./.	./.	0/1:13,5:18:31.93:84,0,32	0/0:11,0:10:2.90:0,3,16	1/1:13,0:15:2.84:14,3,0	./.	./.	0/0:14,0:11:2.94:0,3,18	1/1:3,0:5:2.84:14,3,0	1/1:9,2:11:8.86:78,9,0	./.	./.	0/0:23,0:22:9:0,9,94	1/1:11,3:14:3.01:32,3,0	0/1:13,2:18:40.67:88,0,41	0/1:15,0:20:9.04:9,0,11	1/1:12,1:14:5.85:46,6,0	./.	1/1:27,0:28:0.19:0,0,0	1/1:9,5:15:8.82:66,9,0	1/1:7,2:8:8.81:66,9,0	1/1:20,9:29:17.63:174,18,0	./.	1/1:8,0:8:5.57:28,6,0	1/1:10,0:13:2.84:14,3,0	1/1:4,0:8:5.83:38,6,0
chr10	39729367	.	A	AAGAG	3195.92	PASS	AB=0.972;AC=41;AF=0.891;AN=46;BaseQRankSum=0.832;DP=575;FS=2.040;HRun=0;HaplotypeScore=130.1585;InbreedingCoeff=0.1606;MQ=67.52;MQ0=22;MQRankSum=0.232;QD=7.93;ReadPosRankSum=1.244;VQSLOD=2.2778;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:22:0:0,0,0	./.	./.	0/0:76,0:32:2.90:0,3,16	./.	1/1:23,0:23:6.01:102,6,0	1/1:14,0:22:3.01:46,3,0	1/1:36,0:35:27.47:332,27,0	1/1:18,0:19:12.04:187,12,0	1/1:17,0:21:18.04:306,18,0	./.	1/1:16,0:17:6.02:104,6,0	1/1:13,0:14:7.27:101,7,0	1/1:10,0:11:8.95:130,9,0	1/1:14,3:16:6.02:140,6,0	0/1:21,1:22:49.13:230,0,49	1/1:9,1:20:18.53:326,19,0	1/1:14,0:14:6.02:96,6,0	1/1:14,1:14:21.08:276,21,0	1/1:9,0:9:0.47:1,0,0	1/1:24,0:24:4.14:43,4,0	1/1:13,0:12:6.02:102,6,0	./.	1/1:16,0:16:3.01:47,3,0	0/1:13,0:12:22.10:128,0,22	1/1:16,0:17:21.06:326,21,0	1/1:18,0:18:17.68:255,18,0	1/1:8,0:7:2.99:24,3,0
chr10	39729400	.	A	AGAGAGAGAGTGT	3838.11	PASS	AB=0.986;AC=32;AF=0.571;AN=56;BaseQRankSum=-4.093;DP=443;FS=4.373;HRun=0;HaplotypeScore=139.2500;InbreedingCoeff=-0.0856;MQ=37.00;MQ0=28;MQRankSum=-0.987;QD=11.39;ReadPosRankSum=-1.980;VQSLOD=2.1187;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:24:0.01:0,0,0	1/1:5,0:4:6.91:89,7,0	0/0:27,0:1:3.01:0,3,47	0/0:39,0:4:5.91:0,6,62	0/0:9,0:9:7.41:0,7,85	0/1:24,0:22:0.24:96,0,0	0/0:23,0:22:20.22:0,20,257	0/1:26,0:25:99:429,0,208	0/1:12,0:12:19.52:142,0,20	1/1:18,0:16:36.01:528,36,0	1/1:3,0:5:1.82:5,2,0	1/1:13,0:15:6.02:232,6,0	1/1:10,0:9:12.04:338,12,0	1/1:10,0:10:6.26:152,6,0	1/1:11,0:10:5.75:81,6,0	0/1:15,0:15:24.48:24,0,316	0/1:18,0:19:99:122,0,157	1/1:4,9:20:3.01:172,3,0	0/1:15,0:13:99:272,0,111	0/0:8,0:7:3.11:0,3,32	0/1:22,0:20:70.41:70,0,115	0/1:8,0:7:29.98:30,0,33	0/1:7,0:10:0:0,0,0	1/1:11,0:10:3.39:93,3,0	0/1:11,0:9:26.30:26,0,60	0/1:16,0:14:52.63:490,0,53	0/1:14,0:13:95.06:432,0,95	0/1:12,0:10:14.56:15,0,75
chr10	39729419	.	GGAGAGAGA	G	176.50	PASS	AB=1.000;AC=8;AF=0.143;AN=56;BaseQRankSum=-1.079;DP=457;FS=3.979;HRun=0;HaplotypeScore=112.3250;InbreedingCoeff=0.5791;MQ=38.28;MQ0=27;MQRankSum=-2.737;QD=2.99;ReadPosRankSum=-1.718;VQSLOD=1.3443;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,9:16:5.93:40,6,0	0/0:4,0:4:6.02:0,6,163	0/0:32,0:5:9.03:0,9,304	0/0:42,0:5:9.03:0,9,352	0/0:7,0:7:6.02:0,6,157	0/0:9,0:26:10.38:0,10,230	0/0:17,0:20:30.03:0,30,862	0/0:22,0:22:42.05:0,42,1012	0/0:7,0:12:6.96:0,7,178	0/0:16,0:15:37.57:0,38,1046	0/0:7,0:7:9.03:0,9,352	0/0:6,0:15:12.04:0,12,423	1/1:2,2:5:9.03:230,9,0	1/1:1,4:7:2.48:19,2,0	0/0:5,0:11:6.02:0,6,144	0/0:12,0:13:12.04:0,12,309	0/0:16,0:19:39.03:0,39,1070	0/0:19,0:19:15.05:0,15,558	0/0:11,0:10:15.01:0,15,362	0/0:12,0:10:12.51:0,13,403	0/0:22,0:26:11.97:0,12,277	0/0:11,0:13:12.04:0,12,387	0/0:10,0:8:5.98:0,6,125	0/1:4,0:15:0.56:1,0,1	0/1:13,0:11:0:0,0,0	0/0:11,0:18:38.16:0,38,1152	0/0:8,0:8:12.04:0,12,284	0/0:18,0:15:16.63:0,17,392
chr10	39730908	.	CTTGATGGTAAGGGGG	C	1179.08	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=6.140;DP=650;FS=1.075;HRun=0;HaplotypeScore=269.7774;InbreedingCoeff=0.9668;MQ=87.17;MQ0=0;MQRankSum=-4.969;QD=90.70;ReadPosRankSum=2.798;VQSLOD=3.3607;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,126,9020	0/0:12,0:12:36.11:0,36,2300	0/0:22,0:22:63.22:0,63,3895	0/0:25,0:25:75.24:0,75,4067	0/0:20,0:20:57.19:0,57,3597	1/1:1,4:5:15.05:511,15,0	1/1:0,3:3:9.03:288,9,0	0/0:30,0:30:90.29:0,90,5415	1/1:1,4:5:15.05:512,15,0	0/0:28,0:28:84.29:0,84,5337	0/0:12,0:12:36.12:0,36,2432	0/0:33,0:33:99:0,99,7492	0/0:20,0:20:60.21:0,60,4136	0/0:33,0:33:99:0,99,6539	0/0:28,0:28:84.29:0,84,5597	0/0:26,0:26:78.27:0,78,5457	0/0:37,0:37:99:0,111,8457	0/0:27,0:27:81.28:0,81,5812	0/0:14,0:14:42.14:0,42,2864	0/0:11,0:11:30.10:0,30,2139	0/0:63,0:63:99:0,187,13240	0/0:27,0:27:81.26:0,81,5530	0/0:14,0:14:42.14:0,42,3170	0/0:26,0:26:78.27:0,78,5497	0/0:30,0:30:87.30:0,87,6253	0/0:26,0:26:78.27:0,78,5875	0/0:18,0:17:54.19:0,54,3850	0/0:13,0:13:39.12:0,39,2346
chr10	39730924	.	CACGGCTTGTACCATCCACCTT	C	1584.94	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=5.687;DP=630;FS=4.409;HRun=0;HaplotypeScore=341.5155;InbreedingCoeff=0.9550;MQ=88.15;MQ0=0;MQRankSum=-5.646;QD=144.09;ReadPosRankSum=3.833;VQSLOD=2.6151;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,114,8794	0/0:10,0:10:30.10:0,30,2739	0/0:23,0:23:66.20:0,66,4049	0/0:24,0:24:60.16:0,60,3409	0/0:14,0:14:39.13:0,39,2932	1/1:0,4:4:12.04:650,12,0	1/1:0,3:3:9.03:414,9,0	0/0:28,0:28:81.27:0,81,6064	1/1:0,4:4:12.04:650,12,0	0/0:25,0:25:75.26:0,75,4854	0/0:9,0:9:27.09:0,27,2084	0/0:40,0:40:99:0,120,10412	0/0:17,0:17:51.16:0,51,3908	0/0:28,0:28:78.27:0,78,6809	0/0:23,0:23:66.21:0,66,5061	0/0:30,0:30:90.28:0,90,8068	0/0:37,0:37:99:0,111,10075	0/0:30,0:30:87.30:0,87,8233	0/0:18,0:18:54.17:0,54,3422	0/0:12,0:12:36.11:0,36,2498	0/0:67,0:67:99:0,193,16655	0/0:22,0:22:63.15:0,63,4224	0/0:11,0:11:33.11:0,33,2018	0/0:26,0:26:78.27:0,78,7235	0/0:27,0:27:81.28:0,81,6630	0/0:28,0:28:84.27:0,84,6222	0/0:21,0:20:63.20:0,63,5266	0/0:11,0:11:33.11:0,33,3308
chr10	39732131	.	T	TTTTGCGTGTTGGCTTCTCTCGGC	2432.88	PASS	AB=0.667;AC=31;AF=0.969;AN=32;BaseQRankSum=-1.991;DP=35;FS=3.123;HRun=0;HaplotypeScore=26.8208;InbreedingCoeff=-0.2026;MQ=146.33;MQ0=0;MQRankSum=-0.880;QD=78.48;ReadPosRankSum=-1.065;VQSLOD=2.5731;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,0:2:3.01:59,3,0	./.	1/1:3,0:5:15.02:632,15,0	0/1:3,1:6:35.93:867,0,36	1/1:1,0:1:3.01:41,3,0	./.	1/1:3,0:3:2.98:21,3,0	1/1:1,0:1:3.01:53,3,0	1/1:2,0:2:6.02:110,6,0	1/1:1,0:1:3.01:70,3,0	./.	1/1:1,0:1:3.01:50,3,0	./.	1/1:1,0:1:3.01:59,3,0	1/1:1,0:1:3.01:51,3,0	./.	./.	./.	./.	./.	1/1:1,0:1:3.01:65,3,0	./.	./.	1/1:3,0:3:5.93:40,6,0	1/1:1,0:1:3.01:61,3,0	1/1:1,0:1:3.01:54,3,0	./.	1/1:1,0:1:3.01:281,3,0
chr10	39735603	.	CTTTG	C	10277.78	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=13.444;DP=660;FS=0.000;HRun=0;HaplotypeScore=110.2331;InbreedingCoeff=0.9886;MQ=60.79;MQ0=3;MQRankSum=0.460;QD=23.68;ReadPosRankSum=2.500;VQSLOD=4.7110;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:98.89:0,99,2160	1/1:3,8:11:15.01:214,15,0	0/0:29,0:16:21.02:0,21,433	0/0:24,0:16:15.52:0,16,295	1/1:10,13:22:30.03:452,30,0	0/0:18,0:18:51.16:0,51,1182	0/0:28,0:28:44.73:0,45,1113	1/1:23,15:36:42.07:588,42,0	0/0:25,0:25:48.16:0,48,1102	1/1:10,13:23:42.14:677,42,0	1/1:3,10:13:24.08:387,24,0	1/1:8,20:29:47.90:772,48,0	0/0:26,0:26:63.22:0,63,1444	0/0:25,0:25:60.18:0,60,1364	1/1:7,18:25:42.14:678,42,0	1/1:5,9:14:21.07:339,21,0	1/1:11,14:25:22.48:610,22,0	1/1:5,10:15:24.08:388,24,0	1/1:17,12:28:36.03:466,36,0	1/1:9,9:18:24.08:387,24,0	1/1:13,14:27:33.11:523,33,0	1/1:3,12:15:30.10:470,30,0	1/1:7,9:16:24.08:373,24,0	1/1:10,26:36:54.18:872,54,0	1/1:8,12:20:27.09:436,27,0	1/1:11,16:27:48.16:775,48,0	1/1:6,16:22:39.13:629,39,0	1/1:3,5:8:15.05:242,15,0
chr10	39736906	.	C	CT	1473.22	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=0.215;DP=484;FS=3.981;HRun=2;HaplotypeScore=112.2698;InbreedingCoeff=0.9511;MQ=64.60;MQ0=0;MQRankSum=-3.728;QD=31.35;ReadPosRankSum=-1.609;VQSLOD=2.8066;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:48.15:0,48,589	0/0:4,0:4:12.04:0,12,149	0/0:14,0:13:42.13:0,42,521	0/0:16,0:12:39.12:0,39,482	0/0:21,0:21:20.63:0,21,260	0/0:18,0:18:45.14:0,45,556	0/0:19,0:19:51.16:0,51,631	0/0:22,0:22:51.02:0,51,728	0/0:23,0:23:57.18:0,57,696	0/0:21,0:21:60.19:0,60,741	0/0:7,0:7:12.03:0,12,148	1/1:0,22:22:66.22:949,66,0	0/0:16,0:16:39.12:0,39,483	0/0:26,1:27:20.12:0,20,697	0/0:19,0:19:45.14:0,45,554	0/0:16,0:16:42.13:0,42,518	0/0:18,0:18:36.11:0,36,445	0/0:14,0:14:27.08:0,27,334	0/0:23,0:23:63.20:0,63,781	0/0:7,0:7:9.03:0,9,111	0/0:17,0:17:26.56:0,27,315	0/0:14,0:14:20.59:0,21,259	1/1:0,9:9:27.05:365,27,0	1/1:1,15:16:25.24:301,25,0	0/0:11,0:11:23.71:0,24,297	0/0:28,0:28:75.24:0,75,926	0/0:24,0:22:60.14:0,60,720	0/0:9,0:9:27.08:0,27,334
chr10	39737282	.	GGTGTGT	G	2737.65	PASS	AB=0.873;AC=18;AF=0.321;AN=56;BaseQRankSum=0.794;DP=609;FS=4.190;HRun=0;HaplotypeScore=141.8134;InbreedingCoeff=0.3124;MQ=64.34;MQ0=24;MQRankSum=0.996;QD=10.86;ReadPosRankSum=1.621;VQSLOD=2.3489;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:27:6.02:0,6,105	1/1:8,0:8:11.74:78,12,0	0/0:36,0:20:3.01:0,3,71	0/0:33,0:18:6.91:0,7,147	1/1:16,2:19:30.10:604,30,0	0/0:16,0:16:21.05:0,21,462	0/0:32,0:31:37.52:0,38,735	0/0:28,0:24:7.24:0,7,346	0/0:17,0:17:26.45:0,26,550	0/1:6,0:24:1.53:234,0,2	0/1:8,0:9:48.04:65,0,48	0/0:28,0:28:4.05:0,4,386	0/0:10,0:10:12.04:0,12,289	0/0:19,0:18:9.49:0,9,130	1/1:12,2:15:30.05:510,30,0	1/1:21,0:21:35.92:597,36,0	0/1:12,18:30:12.96:117,0,13	0/1:24,0:21:81.48:96,0,81	0/1:12,0:11:14.24:14,0,15	0/0:14,0:13:26.86:0,27,283	0/0:37,0:36:12.51:0,13,316	1/1:14,1:19:33.09:557,33,0	0/1:19,0:19:14.23:14,0,138	0/1:35,0:31:5.48:5,0,416	0/0:22,0:21:29.96:0,30,326	0/0:27,0:25:26.75:0,27,406	0/1:14,1:14:25.81:26,0,227	0/0:8,0:7:8.91:0,9,63
chr10	39737367	.	G	GA	7174.97	PASS	AB=0.889;AC=42;AF=0.750;AN=56;BaseQRankSum=-9.482;DP=530;FS=2.311;HRun=0;HaplotypeScore=76.1620;InbreedingCoeff=0.5521;MQ=73.18;MQ0=13;MQRankSum=-0.961;QD=17.41;ReadPosRankSum=1.619;VQSLOD=6.8190;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,21:25:23.29:364,23,0	1/1:5,0:7:4.13:32,4,0	0/0:31,0:14:32.75:0,33,389	0/0:42,0:19:42.30:0,42,443	1/1:1,13:15:26.87:327,27,0	0/0:7,0:7:11.99:0,12,118	0/0:26,0:26:36.72:0,37,430	1/1:2,24:26:71.13:809,71,0	0/0:12,0:12:5.02:0,5,30	1/1:7,1:16:26.70:200,27,0	0/1:1,0:5:17.79:21,0,18	0/1:29,0:29:66.99:67,0,76	1/1:6,14:20:33.12:453,33,0	1/1:4,13:17:28.78:411,29,0	1/1:2,17:19:37.33:531,37,0	1/1:1,21:22:29.59:413,30,0	1/1:0,15:15:33.11:455,33,0	1/1:2,1:18:16.16:133,16,0	1/1:4,6:11:15.25:303,15,0	1/1:1,12:14:26.83:349,27,0	1/1:3,25:28:32.36:439,32,0	1/1:3,12:16:30.08:391,30,0	0/1:23,0:22:21.60:22,0,47	0/1:17,0:16:26.26:92,0,26	1/1:0,17:17:24.08:319,24,0	1/1:1,18:20:48.56:593,49,0	1/1:1,13:14:27.07:342,27,0	1/1:3,8:13:8.62:109,9,0
chr10	39738478	.	T	TAA	2671.76	PASS	AB=0.978;AC=15;AF=0.268;AN=56;BaseQRankSum=11.243;DP=471;FS=0.497;HRun=9;HaplotypeScore=82.4339;InbreedingCoeff=0.7597;MQ=75.03;MQ0=1;MQRankSum=-8.575;QD=22.26;ReadPosRankSum=-2.911;VQSLOD=2.4408;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,13:25:45.07:637,45,0	0/0:13,0:13:27.05:0,27,287	0/1:12,1:14:28.74:29,0,78	0/1:15,0:11:77.36:77,0,79	0/0:22,0:23:59.85:0,60,611	0/0:15,0:15:42.09:0,42,447	0/0:18,0:18:42.05:0,42,438	0/0:20,0:20:48.06:0,48,501	0/0:17,0:17:42.10:0,42,447	0/0:19,0:19:54.13:0,54,575	0/0:20,0:20:51.09:0,51,533	1/1:4,8:12:33.11:501,33,0	1/1:5,7:12:27.09:408,27,0	1/1:5,12:18:48.16:732,48,0	0/0:16,0:16:39.07:0,39,407	0/0:13,0:13:36.07:0,36,374	0/0:30,0:30:78.13:0,78,812	0/0:19,0:19:42.03:0,42,435	0/0:20,0:20:41.94:0,42,423	0/0:22,0:22:60.14:0,60,638	0/1:4,0:4:0.10:0,0,55	0/0:11,0:11:30.07:0,30,319	1/1:8,5:13:22.27:292,22,0	1/1:3,4:7:12.04:185,12,0	0/0:21,0:20:54.09:0,54,558	0/0:20,0:20:51.12:0,51,543	0/0:18,0:18:48.11:0,48,511	0/0:16,0:16:48.12:0,48,511
chr10	39738491	.	G	GCTTT	3991.65	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=12.829;DP=463;FS=0.461;HRun=0;HaplotypeScore=90.9689;InbreedingCoeff=0.8651;MQ=67.88;MQ0=1;MQRankSum=-10.653;QD=42.02;ReadPosRankSum=-1.584;VQSLOD=3.6582;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,11:21:56.83:1113,57,0	0/0:12,0:12:33.07:0,33,568	0/0:7,0:7:3.80:0,4,116	0/1:17,0:10:25.40:25,0,99	0/0:24,0:25:71.83:0,72,1278	0/0:16,0:16:48.16:0,48,976	0/0:16,0:16:48.15:0,48,924	0/0:25,0:25:72.18:0,72,1228	0/0:14,0:14:42.14:0,42,830	0/0:21,0:21:60.12:0,60,1067	0/0:18,0:18:54.15:0,54,1035	1/1:6,5:11:29.71:514,30,0	1/1:5,0:12:32.76:399,33,0	1/1:4,0:17:47.85:673,48,0	0/0:13,0:13:38.97:0,39,684	0/0:10,0:10:30.09:0,30,573	0/0:32,0:32:96.27:0,96,1808	0/0:20,0:22:63.08:0,63,1070	0/0:20,0:22:60.14:0,60,1034	0/0:23,0:23:66.17:0,66,1314	0/0:4,0:4:12.03:0,12,193	0/0:9,0:10:30.06:0,30,533	1/1:3,6:11:33.09:805,33,0	1/1:1,5:6:18.06:463,18,0	0/0:19,0:18:57.16:0,57,1051	0/0:19,0:21:60.64:0,61,1115	0/0:19,0:19:53.98:0,54,953	0/0:18,0:19:54.12:0,54,984
chr10	39740995	.	G	GC	6824.06	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=16.118;DP=713;FS=12.115;HRun=0;HaplotypeScore=83.0155;InbreedingCoeff=0.9995;MQ=82.54;MQ0=0;MQRankSum=0.940;QD=37.29;ReadPosRankSum=3.689;VQSLOD=4.1588;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,48:50:99:1775,129,0	0/0:8,0:8:24.08:0,24,335	0/0:21,0:21:57.09:0,57,742	0/0:21,0:21:57.14:0,57,725	0/0:24,0:24:64.18:0,64,934	0/0:18,0:18:54.18:0,54,753	0/0:31,0:31:90.25:0,90,1219	0/0:26,0:26:78.26:0,78,1089	0/0:26,0:26:78.26:0,78,1089	0/0:26,0:26:75.21:0,75,975	0/0:19,0:19:57.11:0,57,755	1/1:0,28:28:81.27:1125,81,0	1/1:1,32:33:93.31:1277,93,0	1/1:1,23:24:65.87:890,66,0	0/0:15,0:15:45.15:0,45,629	0/0:27,0:27:81.25:0,81,1115	0/0:34,0:34:99:0,102,1390	0/0:26,0:26:78.23:0,78,1066	0/0:21,0:21:63.21:0,63,881	0/0:16,0:16:48.14:0,48,653	0/0:52,0:52:99:0,157,2180	0/0:28,0:28:78.21:0,78,1035	1/1:1,15:16:37.41:544,37,0	1/1:0,32:32:90.28:1213,90,0	0/0:19,0:19:57.19:0,57,797	0/0:28,0:28:81.26:0,81,1116	0/0:32,0:32:93.31:0,93,1299	0/0:12,0:12:36.12:0,36,503
chr10	39741182	.	ATTC	A	4185.98	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=9.119;DP=672;FS=0.881;HRun=0;HaplotypeScore=100.4144;InbreedingCoeff=0.9998;MQ=82.95;MQ0=0;MQRankSum=-2.173;QD=36.09;ReadPosRankSum=3.876;VQSLOD=4.5005;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,144,3125	0/0:13,0:13:39.13:0,39,849	0/0:19,0:19:48.16:0,48,1020	0/0:21,0:21:30.43:0,30,987	1/1:2,23:25:51.14:805,51,0	0/0:18,0:18:51.18:0,51,1139	0/0:28,0:28:84.29:0,84,1820	0/0:37,0:37:99:0,108,2284	0/0:22,0:22:60.21:0,60,1312	0/0:25,0:25:66.23:0,66,1475	0/0:14,0:14:42.14:0,42,922	0/0:28,0:28:78.27:0,78,1732	0/0:21,0:21:60.21:0,60,1336	0/0:24,0:24:72.25:0,72,1580	1/1:0,19:19:42.14:686,42,0	1/1:0,17:17:42.14:686,42,0	1/1:2,28:30:69.24:1127,69,0	0/0:21,0:21:60.15:0,60,1245	0/0:28,0:28:84.29:0,84,1833	0/0:18,0:18:45.14:0,45,963	0/0:44,0:44:99:0,132,2931	1/1:1,24:25:54.18:882,54,0	0/0:16,0:16:48.12:0,48,981	0/0:15,0:15:39.13:0,39,852	0/0:23,0:23:66.23:0,66,1460	0/0:29,0:29:81.24:0,81,1760	0/0:28,0:27:84.29:0,84,1854	0/0:13,0:13:39.13:0,39,871
chr10	39744861	.	CGTG	C	1948.74	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.168;DP=708;FS=1.176;HRun=0;HaplotypeScore=99.1220;InbreedingCoeff=0.9977;MQ=76.44;MQ0=0;MQRankSum=0.224;QD=29.53;ReadPosRankSum=4.248;VQSLOD=4.0847;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:58:99:0,135,2685	0/0:11,0:11:21.07:0,21,425	0/0:25,0:25:42.14:0,42,860	0/0:20,0:20:38.79:0,39,751	0/0:17,0:17:27.09:0,27,550	0/0:20,0:20:42.14:0,42,873	0/0:29,0:29:69.20:0,69,1326	0/0:29,0:29:42.13:0,42,796	0/0:28,0:28:69.22:0,69,1396	0/0:23,0:23:45.15:0,45,876	0/0:17,0:17:33.10:0,33,648	1/1:3,22:25:60.20:890,60,0	0/0:19,0:19:48.16:0,48,999	0/0:18,0:18:42.14:0,42,851	0/0:22,0:22:60.21:0,60,1235	0/0:27,0:27:69.19:0,69,1325	0/0:49,1:50:81.91:0,82,2493	0/0:39,0:39:99:0,102,2066	0/0:22,0:22:48.16:0,48,970	0/0:15,0:15:39.11:0,39,772	0/0:45,0:45:99:0,102,2069	0/0:32,0:32:63.22:0,63,1289	1/1:5,12:17:33.11:489,33,0	1/1:2,22:24:48.16:712,48,0	0/0:19,0:19:54.19:0,54,1125	0/0:25,0:25:48.14:0,48,931	0/0:19,0:19:51.18:0,51,1047	0/0:13,0:13:30.10:0,30,625
chr10	39746398	.	C	CAAA	2215.74	PASS	AB=0.545;AC=11;AF=0.196;AN=56;BaseQRankSum=5.775;DP=654;FS=0.000;HRun=8;HaplotypeScore=97.6218;InbreedingCoeff=0.8838;MQ=80.26;MQ0=0;MQRankSum=-0.070;QD=14.20;ReadPosRankSum=-0.287;VQSLOD=0.1790;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,41:48:72.67:1358,73,0	0/0:13,0:13:39.13:0,39,512	0/0:14,0:15:33.03:0,33,415	0/0:15,0:16:17.46:0,17,265	0/0:22,0:23:58.72:0,59,786	0/0:24,0:24:57.16:0,57,748	0/0:20,0:20:54.15:0,54,694	0/0:30,0:31:75.11:0,75,915	0/0:16,0:16:45.14:0,45,591	0/0:22,0:22:54.13:0,54,681	0/0:30,0:30:81.20:0,81,1046	1/1:1,0:17:23.11:71,23,0	1/1:3,17:20:29.88:543,30,0	1/1:2,11:17:21.03:349,21,0	0/0:27,0:27:72.22:0,72,946	0/0:23,0:23:66.20:0,66,867	0/0:35,0:35:87.21:0,87,1127	0/0:18,0:18:45.12:0,45,591	0/0:18,0:20:43.66:0,44,588	0/0:27,0:27:72.13:0,72,866	0/0:28,0:28:78.18:0,78,976	0/0:21,0:21:43.28:0,43,555	1/1:6,0:30:24.97:55,25,0	0/1:4,0:24:17.82:18,0,53	0/0:24,0:24:63.13:0,63,791	0/0:20,0:21:46.69:0,47,628	0/0:34,0:32:76.69:0,77,1021	0/0:10,0:10:21.04:0,21,275
chr10	39748009	.	T	TGAAG	9332.08	PASS	AB=1.000;AC=33;AF=0.589;AN=56;BaseQRankSum=13.436;DP=647;FS=6.709;HRun=0;HaplotypeScore=153.7945;InbreedingCoeff=-0.2879;MQ=61.86;MQ0=2;MQRankSum=-4.839;QD=15.61;ReadPosRankSum=10.654;VQSLOD=2.7342;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:21:24.20:361,24,0	0/1:16,0:16:94.83:95,0,207	0/0:25,0:19:54.10:0,54,857	0/0:21,0:16:41.95:0,42,600	0/1:31,0:31:99:622,0,187	1/1:6,28:37:52.44:1288,52,0	1/1:22,3:25:21.46:331,21,0	0/1:25,0:24:86.44:86,0,601	1/1:11,21:32:81.81:1739,82,0	0/1:32,0:32:99:423,0,423	0/1:17,0:17:99:245,0,182	1/1:15,0:15:8.23:151,8,0	1/1:3,0:21:13.37:260,13,0	1/1:1,1:24:5.48:104,5,0	0/1:33,0:33:99:357,0,262	0/1:32,0:32:99:453,0,375	0/1:30,0:30:99:421,0,345	0/1:12,0:12:99:111,0,190	0/1:19,0:19:99:269,0,256	0/1:23,0:23:99:236,0,328	0/1:11,0:11:44.87:148,0,45	0/1:24,0:24:99:353,0,251	1/1:12,0:12:22.94:198,23,0	0/1:23,0:23:33.06:135,0,33	0/1:29,0:29:99:323,0,372	0/1:26,0:26:99:307,0,352	0/1:27,0:27:99:316,0,253	0/0:3,0:3:8.99:0,9,98
chr10	39748010	.	T	TAAGG	21577.08	PASS	AB=1.000;AC=51;AF=0.911;AN=56;BaseQRankSum=-2.308;DP=766;FS=22.873;HRun=0;HaplotypeScore=194.4710;InbreedingCoeff=0.7353;MQ=56.94;MQ0=2;MQRankSum=-1.675;QD=30.01;ReadPosRankSum=3.715;VQSLOD=3.3582;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:23:30.04:410,30,0	1/1:8,10:20:17.93:414,18,0	0/0:25,0:18:24.08:0,24,375	0/0:22,0:17:18.05:0,18,249	1/1:14,25:41:72.28:1604,72,0	1/1:38,0:38:57.20:1377,57,0	1/1:25,0:25:23.54:309,24,0	1/1:17,9:28:24.97:483,25,0	1/1:34,0:34:81.18:1818,81,0	1/1:17,22:41:84.11:1771,84,0	1/1:9,12:23:33.09:702,33,0	1/1:18,0:18:13.69:167,14,0	1/1:23,0:22:24.08:418,24,0	1/1:26,0:26:21.07:380,21,0	1/1:11,24:39:45.15:1093,45,0	1/1:11,22:37:57.20:1346,57,0	1/1:10,22:34:47.65:1101,48,0	1/1:7,6:13:21.07:476,21,0	1/1:8,12:19:36.12:864,36,0	1/1:16,13:29:42.14:973,42,0	1/1:4,8:15:20.81:420,21,0	1/1:21,9:30:51.11:1099,51,0	1/1:25,0:25:56.40:566,56,0	0/1:26,0:26:6.15:116,0,6	1/1:37,10:46:72.28:1419,72,0	1/1:15,12:27:54.12:1176,54,0	1/1:11,19:31:44.36:1026,44,0	1/1:3,0:3:3.01:47,3,0
chr10	39748062	.	TAGGA	T	8945.36	PASS	AB=0.826;AC=27;AF=0.482;AN=56;BaseQRankSum=-3.011;DP=898;FS=95.059;HRun=0;HaplotypeScore=327.2763;InbreedingCoeff=-0.9313;MQ=39.49;MQ0=3;MQRankSum=-4.102;QD=10.05;ReadPosRankSum=-4.564;VQSLOD=0.4894;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:6,11:17:99:516,0,112	0/1:20,6:26:99:296,0,610	0/1:41,3:26:56.85:57,0,211	0/1:42,5:32:99:193,0,210	0/1:25,10:34:99:417,0,559	0/1:22,8:30:99:458,0,304	0/1:19,14:33:99:492,0,625	0/1:35,1:31:99:157,0,565	0/1:22,10:32:99:577,0,303	0/1:48,7:55:99:495,0,1320	0/1:29,4:33:99:215,0,887	0/1:17,6:23:99:139,0,316	0/1:22,7:28:99:409,0,358	0/1:12,12:24:99:674,0,247	0/1:27,7:34:99:451,0,333	0/1:26,12:38:99:723,0,596	0/1:16,6:22:99:215,0,183	0/1:7,2:9:99:114,0,289	0/1:39,4:38:99:318,0,343	0/1:28,5:32:99:242,0,480	0/1:16,3:19:99:129,0,678	0/1:38,7:44:99:271,0,883	0/1:33,8:41:99:369,0,461	0/1:18,4:22:23.80:24,0,368	0/1:48,4:51:99:183,0,1179	0/1:30,10:40:99:569,0,651	0/1:24,4:28:99:245,0,502	0/0:8,0:8:20.74:0,21,276
chr10	39748705	.	A	ACGGCACCGGCAC	4823.18	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=1.111;DP=495;FS=16.121;HRun=0;HaplotypeScore=162.1687;InbreedingCoeff=0.9636;MQ=93.21;MQ0=0;MQRankSum=-9.798;QD=59.55;ReadPosRankSum=1.799;VQSLOD=3.9193;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,10:22:45.15:2329,45,0	0/0:3,0:3:6.02:0,6,219	0/0:27,0:27:51.52:0,52,1287	0/0:23,0:23:49.85:0,50,1473	0/0:16,0:16:48.15:0,48,1611	0/0:22,0:21:51.17:0,51,1855	0/0:20,0:20:51.16:0,51,1547	0/0:32,0:32:72.25:0,72,2423	0/0:19,0:19:48.16:0,48,1692	0/0:19,0:19:48.16:0,48,1569	0/0:11,0:11:33.11:0,33,1194	1/1:4,0:12:12.04:157,12,0	1/1:4,6:10:21.07:1041,21,0	1/1:5,6:15:15.05:831,15,0	0/0:16,0:16:45.15:0,45,1500	0/0:15,0:15:42.14:0,42,1410	0/0:36,0:36:90.29:0,90,3028	0/0:24,0:24:69.19:0,69,2133	0/0:25,0:25:60.16:0,60,1838	0/0:9,0:9:24.08:0,24,702	0/0:20,0:20:57.18:0,57,1824	0/0:13,0:13:36.12:0,36,1287	1/1:1,0:8:15.05:186,15,0	1/1:7,0:14:21.07:279,21,0	0/0:13,0:13:30.10:0,30,832	0/0:16,0:16:48.16:0,48,1691	0/0:25,0:25:69.22:0,69,2353	0/0:10,0:10:24.08:0,24,745
chr10	39749440	.	ATTG	A	2477.41	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=6.241;DP=662;FS=4.002;HRun=0;HaplotypeScore=99.2784;InbreedingCoeff=0.9984;MQ=90.68;MQ0=0;MQRankSum=-3.330;QD=34.89;ReadPosRankSum=1.198;VQSLOD=4.0434;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,117,1877	0/0:14,0:14:39.13:0,39,860	0/0:27,0:27:72.17:0,72,1426	0/0:26,0:26:65.42:0,65,1210	0/0:25,0:25:72.21:0,72,1487	1/1:2,14:16:42.14:661,42,0	1/1:3,25:28:60.20:948,60,0	0/0:29,0:29:66.23:0,66,1431	1/1:3,24:27:63.21:1011,63,0	0/0:22,0:22:63.21:0,63,1331	0/0:14,0:14:42.13:0,42,870	0/0:27,0:27:78.21:0,78,1618	0/0:27,0:27:72.68:0,73,1138	0/0:19,0:19:57.11:0,57,907	0/0:14,0:14:42.13:0,42,882	0/0:16,0:16:45.15:0,45,975	0/0:40,0:40:99:0,120,2569	0/0:25,0:25:72.25:0,72,1589	0/0:21,0:21:50.86:0,51,1023	0/0:12,0:12:36.12:0,36,794	0/0:39,0:39:99:0,105,2222	0/0:20,0:20:60.19:0,60,1270	0/0:26,0:26:75.24:0,75,1569	0/0:30,1:31:36.09:0,36,1700	0/0:19,0:19:57.20:0,57,1241	0/0:22,0:22:63.22:0,63,1378	0/0:26,0:26:78.27:0,78,1711	0/0:8,0:8:21.07:0,21,455
chr10	39750427	.	AC	A	736.55	PASS	AB=1.000;AC=17;AF=0.340;AN=50;BaseQRankSum=-1.049;DP=155;FS=23.215;HRun=9;HaplotypeScore=25.0585;InbreedingCoeff=0.6511;MQ=100.24;MQ0=2;MQRankSum=-0.306;QD=10.99;ReadPosRankSum=2.433;VQSLOD=0.5872;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:21.03:0,21,221	0/0:2,0:2:6.02:0,6,69	0/0:12,0:8:11.97:0,12,110	0/1:16,0:12:5.55:6,0,35	0/0:3,0:3:9.03:0,9,104	./.	0/0:6,0:6:2.84:0,3,14	1/1:2,4:6:9:82,9,0	0/0:6,0:7:5.77:0,6,32	0/0:6,0:6:6.02:0,6,69	./.	0/0:4,0:4:5.81:0,6,34	0/0:7,0:7:15.04:0,15,173	0/0:4,0:4:11.88:0,12,105	0/0:4,0:4:8.98:0,9,89	0/0:3,0:3:2.97:0,3,20	0/0:8,0:8:15.02:0,15,160	0/0:3,0:3:6.02:0,6,69	1/1:3,6:9:18.01:164,18,0	1/1:1,4:5:9:82,9,0	1/1:2,9:11:18.01:165,18,0	./.	0/0:2,0:2:3:0,3,29	0/0:3,0:3:2.97:0,3,20	1/1:0,5:5:12.01:110,12,0	1/1:0,3:3:9:82,9,0	1/1:1,5:6:15.01:137,15,0	1/1:2,4:6:9:82,9,0
chr10	39750962	.	T	TCC	534.52	PASS	AB=0.900;AC=24;AF=0.857;AN=28;BaseQRankSum=-2.661;DP=32;FS=0.000;HRun=3;HaplotypeScore=16.1279;InbreedingCoeff=0.1869;MQ=113.56;MQ0=0;MQRankSum=-3.001;QD=23.24;ReadPosRankSum=-2.548;VQSLOD=0.5036;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,2:5:2.97:20,3,0	./.	0/0:7,0:4:8.89:0,9,70	0/1:3,1:3:2.31:50,0,2	./.	./.	1/1:0,2:2:6.02:110,6,0	0/1:1,0:1:0:0,0,0	1/1:0,1:1:3.01:55,3,0	1/1:2,0:1:3.01:51,3,0	1/1:1,0:1:3.01:48,3,0	./.	./.	1/1:1,1:2:5.95:69,6,0	1/1:0,1:1:3.01:55,3,0	./.	./.	./.	./.	./.	1/1:0,1:1:3.01:55,3,0	./.	./.	1/1:1,0:1:0.47:1,0,0	./.	1/1:0,1:1:3.01:54,3,0	1/1:0,1:1:3.01:55,3,0	./.
chr10	39750975	.	T	TC	279.93	PASS	AB=1.000;AC=13;AF=0.283;AN=46;BaseQRankSum=1.469;DP=84;FS=0.000;HRun=7;HaplotypeScore=19.9149;InbreedingCoeff=0.4617;MQ=99.01;MQ0=0;MQRankSum=-2.012;QD=12.17;ReadPosRankSum=-0.425;VQSLOD=0.4721;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,0:7:17.92:141,18,0	./.	0/0:11,0:8:22.22:0,22,190	0/0:7,1:6:0.31:0,0,97	0/0:2,0:2:2.99:0,3,24	./.	0/0:8,0:8:24.02:0,24,225	0/0:2,0:3:8.75:0,9,70	0/0:2,0:2:6.01:0,6,58	0/0:5,0:4:12.02:0,12,116	0/0:1,0:1:3:0,3,29	1/1:1,0:1:3.01:36,3,0	1/1:2,0:2:5.93:40,6,0	1/1:3,0:3:5.80:40,6,0	0/0:1,0:1:3:0,3,29	0/0:2,0:2:2.98:0,3,22	0/0:2,0:2:6.01:0,6,58	0/1:4,0:4:21.07:21,0,48	0/0:1,0:1:3:0,3,29	./.	0/0:4,0:4:12.02:0,12,116	./.	1/1:1,2:3:3.01:36,3,0	1/1:0,3:3:9.03:108,9,0	0/0:1,0:1:3:0,3,29	0/0:6,0:6:18.03:0,18,174	0/0:3,0:3:9.01:0,9,87	./.
chr10	39750979	.	C	CA	359.02	PASS	AB=1.000;AC=9;AF=0.188;AN=48;BaseQRankSum=1.353;DP=106;FS=0.000;HRun=0;HaplotypeScore=21.7479;InbreedingCoeff=0.3405;MQ=92.34;MQ0=0;MQRankSum=-2.191;QD=14.36;ReadPosRankSum=0.832;VQSLOD=3.6980;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,8:8:18.06:268,18,0	./.	0/0:11,0:8:23.93:0,24,285	0/0:8,0:6:7.91:0,8,162	0/0:2,0:2:3.01:0,3,41	./.	0/0:10,0:10:30.08:0,30,384	0/0:5,0:5:12.03:0,12,140	0/0:2,0:2:6.02:0,6,84	0/0:5,0:4:12.04:0,12,168	0/0:1,0:1:3.01:0,3,42	0/1:2,0:2:4.61:5,0,21	1/1:0,2:2:6.02:90,6,0	1/1:3,1:4:8.72:92,9,0	0/0:2,0:2:6.01:0,6,69	0/0:3,0:3:9.01:0,9,92	0/0:5,0:5:12.01:0,12,133	0/0:4,0:4:0.55:0,1,97	0/0:2,0:2:6.01:0,6,69	./.	0/0:4,0:4:12.04:0,12,168	0/0:3,0:3:6:0,6,54	0/1:4,0:4:3.76:4,0,20	0/1:5,0:5:30.29:30,0,37	0/0:2,0:2:3.01:0,3,42	0/0:6,0:6:18.06:0,18,251	0/0:6,0:6:18.03:0,18,203	./.
chr10	39752034	.	T	TA	6184.25	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-8.234;DP=336;FS=3.223;HRun=8;HaplotypeScore=37.5037;InbreedingCoeff=0.8214;MQ=63.53;MQ0=7;MQRankSum=-1.188;QD=25.66;ReadPosRankSum=-0.885;VQSLOD=4.9331;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:72.04:0,72,659	1/1:1,9:10:27.08:311,27,0	0/0:4,0:3:7.09:0,7,38	0/0:8,0:5:0.06:0,0,23	1/1:4,18:22:48.14:554,48,0	0/0:20,0:20:48.02:0,48,439	0/0:8,0:7:14.99:0,15,132	1/1:10,30:36:87.24:986,87,0	0/0:2,0:2:6:0,6,55	1/1:3,10:13:30.09:342,30,0	1/1:6,11:16:30.09:346,30,0	0/0:7,0:7:12.95:0,13,112	0/0:2,0:2:3:0,3,27	0/0:7,0:7:11.98:0,12,103	1/1:3,5:8:12.04:139,12,0	1/1:0,7:7:18.05:208,18,0	1/1:6,24:29:66.20:761,66,0	1/1:0,13:13:36.11:415,36,0	1/1:3,14:17:42.11:474,42,0	1/1:1,8:9:21.02:228,21,0	1/1:1,2:3:3.01:35,3,0	1/1:0,3:3:6.02:69,6,0	0/0:4,0:4:12.01:0,12,110	0/0:2,0:3:7.82:0,8,60	1/1:4,9:13:24.07:277,24,0	1/1:1,14:16:44.94:486,45,0	1/1:1,17:18:42.12:485,42,0	1/1:0,2:2:6.02:69,6,0
chr10	39753798	.	G	GTAATAA	6916.89	PASS	AC=42;AF=0.808;AN=52;BaseQRankSum=3.533;DP=346;FS=10.241;HRun=0;HaplotypeScore=108.3401;InbreedingCoeff=0.8359;MQ=73.67;MQ0=1;MQRankSum=-9.317;QD=29.69;ReadPosRankSum=-5.203;VQSLOD=2.6537;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:96.31:0,96,1863	./.	0/0:15,0:15:11.82:0,12,134	0/0:14,0:13:15.04:0,15,233	1/1:13,0:13:21.05:325,21,0	1/1:3,12:15:18.06:543,18,0	1/1:3,4:7:8.99:217,9,0	1/1:35,0:34:48.13:744,48,0	1/1:4,2:7:9.03:271,9,0	1/1:6,0:6:12.04:235,12,0	1/1:2,0:6:9.03:153,9,0	1/1:4,10:15:18.01:489,18,0	0/0:21,0:22:57.19:0,57,1098	0/0:14,0:15:36.11:0,36,665	1/1:4,0:8:12.04:291,12,0	1/1:6,0:12:21.07:530,21,0	1/1:7,0:17:21.07:547,21,0	1/1:4,0:19:9.03:234,9,0	1/1:8,0:7:12:180,12,0	1/1:7,0:7:12.04:203,12,0	./.	1/1:5,0:5:5.85:92,6,0	1/1:2,2:6:3.01:99,3,0	1/1:8,0:8:20.96:303,21,0	1/1:9,0:9:15.04:225,15,0	1/1:10,0:10:15.94:380,16,0	1/1:14,0:14:27.09:470,27,0	1/1:4,0:6:18.03:385,18,0
chr10	39753830	.	A	AACAACG	5862.94	PASS	AB=1.000;AC=43;AF=0.768;AN=56;BaseQRankSum=0.725;DP=434;FS=0.458;HRun=0;HaplotypeScore=129.6855;InbreedingCoeff=0.1004;MQ=63.87;MQ0=0;MQRankSum=-7.613;QD=14.99;ReadPosRankSum=-1.690;VQSLOD=3.4054;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:37,0:37:24.06:24,0,840	1/1:5,0:5:14.44:112,14,0	0/0:17,0:13:30.10:0,30,507	0/0:26,0:22:50.55:0,51,631	1/1:14,0:14:29.37:210,29,0	0/1:18,0:18:99:162,0,310	0/1:11,0:11:55.77:56,0,236	1/1:45,0:44:80.81:975,81,0	0/1:9,0:9:63.67:64,0,273	1/1:8,0:8:17.94:187,18,0	1/1:8,0:8:20.39:132,20,0	0/1:15,0:15:99:143,0,304	0/1:24,0:24:9.99:10,0,495	0/1:18,0:18:74.33:74,0,244	1/1:11,0:11:29.48:222,29,0	1/1:15,0:15:35.55:366,36,0	1/1:16,0:16:35.31:281,35,0	1/1:26,0:26:53.24:383,53,0	1/1:7,6:14:26.68:257,27,0	1/1:13,0:13:29.43:372,29,0	1/1:8,0:8:17.98:271,18,0	1/1:12,0:12:34.86:251,35,0	0/1:14,0:14:16.32:16,0,466	0/1:7,0:7:80.02:80,0,84	1/1:8,0:8:9.01:155,9,0	1/1:6,0:6:12:243,12,0	1/1:18,0:18:20.88:379,21,0	1/1:11,0:11:15.05:438,15,0
chr10	39753833	.	A	AACGACG	8953.84	PASS	AB=0.919;AC=40;AF=0.714;AN=56;BaseQRankSum=-4.994;DP=451;FS=0.861;HRun=0;HaplotypeScore=124.6502;InbreedingCoeff=0.1180;MQ=63.74;MQ0=0;MQRankSum=-5.711;QD=22.73;ReadPosRankSum=-0.353;VQSLOD=4.0413;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:37,0:37:99:215,0,367	1/1:5,0:5:15.02:208,15,0	0/0:17,0:13:32.26:0,32,721	0/0:25,0:21:54.16:0,54,1000	1/1:14,0:16:5.57:386,6,0	0/1:15,0:15:67.15:67,0,413	0/1:12,0:12:13.84:14,0,432	1/1:47,0:46:59.13:1661,59,0	0/1:10,0:10:22.80:23,0,375	1/1:7,0:9:24.03:360,24,0	1/1:7,0:8:17.08:216,17,0	0/1:17,0:17:55.83:56,0,509	0/1:25,0:25:99:101,0,268	0/1:16,0:16:99:213,0,125	1/1:9,0:12:35.97:409,36,0	1/1:9,0:15:38.14:514,38,0	1/1:14,0:18:39.11:563,39,0	1/1:22,0:25:57.05:744,57,0	1/1:14,1:15:34.35:445,34,0	1/1:2,12:14:16.28:485,16,0	1/1:10,0:10:21.05:418,21,0	1/1:11,0:12:36.07:464,36,0	0/0:15,0:15:10.61:0,11,645	0/1:6,0:7:12.39:12,0,157	0/1:3,6:11:9.74:121,0,10	1/1:1,6:8:20.60:380,21,0	0/1:7,12:19:10.90:361,0,11	1/1:0,10:11:15.05:520,15,0
chr10	39754239	.	TAC	T	14689.14	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=10.219;DP=718;FS=0.000;HRun=0;HaplotypeScore=107.3349;InbreedingCoeff=0.9883;MQ=59.49;MQ0=11;MQRankSum=1.233;QD=25.86;ReadPosRankSum=5.363;VQSLOD=5.7426;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,16:20:26.66:350,27,0	1/1:1,12:12:27.09:351,27,0	0/0:50,0:30:59.78:0,60,859	0/0:30,0:17:10.76:0,11,383	1/1:3,30:33:84.27:1088,84,0	0/0:24,0:24:63.18:0,63,1009	0/0:22,0:22:51.17:0,51,853	1/1:2,28:30:84.11:993,84,0	0/0:24,0:24:54.17:0,54,891	1/1:2,27:28:72.03:864,72,0	1/1:3,21:24:42.14:546,42,0	1/1:2,0:19:25.40:123,25,0	1/1:1,19:20:42.14:546,42,0	1/1:2,22:24:48.16:624,48,0	1/1:1,26:27:75.24:974,75,0	1/1:0,22:21:51.17:663,51,0	1/1:3,22:25:43.69:547,44,0	1/1:5,23:28:48.10:624,48,0	1/1:4,15:19:40.34:499,40,0	1/1:1,34:34:81.26:1052,81,0	1/1:2,32:34:78.25:1013,78,0	1/1:2,22:23:36.12:468,36,0	1/1:2,0:25:39.77:196,40,0	1/1:0,0:15:19.89:98,20,0	1/1:4,35:39:87.28:1131,87,0	1/1:3,22:25:66.15:810,66,0	1/1:3,19:22:47.97:623,48,0	1/1:2,14:16:39.13:507,39,0
chr10	39755351	.	GTAC	G	1196.85	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=9.386;DP=436;FS=3.508;HRun=0;HaplotypeScore=92.9029;InbreedingCoeff=0.9673;MQ=87.82;MQ0=0;MQRankSum=-9.361;QD=27.20;ReadPosRankSum=1.835;VQSLOD=3.9194;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:63.19:0,63,1497	1/1:4,9:13:33.04:383,33,0	0/0:19,0:19:54.19:0,54,1282	0/0:17,0:17:48.11:0,48,1064	0/0:20,0:20:60.21:0,60,1479	0/0:12,0:12:36.11:0,36,838	0/0:11,0:11:33.10:0,33,762	0/0:41,0:41:99:0,120,2842	0/0:14,0:14:42.14:0,42,1035	1/1:1,11:11:33.07:395,33,0	1/1:1,9:10:21.06:248,21,0	0/0:19,0:19:57.15:0,57,1258	0/0:6,0:6:18.06:0,18,444	0/0:10,0:10:30.09:0,30,687	0/0:13,0:13:39.13:0,39,961	0/0:2,0:2:6.02:0,6,148	0/0:21,0:20:57.20:0,57,1402	1/1:0,9:9:27.06:330,27,0	0/0:16,0:16:48.16:0,48,1142	0/0:23,0:23:69.24:0,69,1692	0/0:13,0:13:39.13:0,39,961	0/0:14,0:14:42.14:0,42,1008	0/0:11,0:11:33.10:0,33,764	0/0:20,0:20:60.18:0,60,1390	0/0:12,0:12:33.11:0,33,813	0/0:19,0:19:54.18:0,54,1268	0/0:18,0:18:54.17:0,54,1255	0/0:20,0:20:60.12:0,60,1260
chr10	39755356	.	AGAGT	A	1446.70	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=9.207;DP=419;FS=0.722;HRun=0;HaplotypeScore=98.9452;InbreedingCoeff=0.9796;MQ=86.80;MQ0=0;MQRankSum=-9.514;QD=38.07;ReadPosRankSum=1.553;VQSLOD=3.8993;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:57.20:0,57,1636	1/1:0,9:9:27.09:401,27,0	0/0:19,0:19:57.07:0,57,1415	0/0:14,0:14:42.14:0,42,1207	0/0:21,0:21:60.21:0,60,1725	0/0:11,0:11:33.11:0,33,943	0/0:9,0:9:27.09:0,27,753	0/0:44,0:44:99:0,129,3724	0/0:14,0:14:42.14:0,42,1179	1/1:0,11:10:30.10:445,30,0	1/1:0,9:9:27.09:373,27,0	0/0:16,0:16:48.16:0,48,1380	0/0:6,0:6:18.06:0,18,522	0/0:8,0:8:24.08:0,24,696	0/0:13,0:13:39.13:0,39,1130	0/0:3,0:3:9.02:0,9,198	0/0:22,0:21:63.10:0,63,1503	1/1:0,9:9:27.07:387,27,0	0/0:19,0:19:57.20:0,57,1649	0/0:24,0:24:69.24:0,69,1999	0/0:14,0:14:42.14:0,42,1163	0/0:13,0:13:36.12:0,36,1043	0/0:10,0:10:30.10:0,30,870	0/0:17,0:17:51.18:0,51,1477	0/0:13,0:13:36.12:0,36,1042	0/0:18,0:18:48.15:0,48,1323	0/0:18,0:18:54.19:0,54,1511	0/0:16,0:16:48.16:0,48,1374
chr10	39755409	.	TTATATATATATATATA	T	2547.05	PASS	AC=26;AF=0.867;AN=30;BaseQRankSum=-0.158;DP=244;FS=0.000;HRun=0;HaplotypeScore=127.4863;InbreedingCoeff=0.2902;MQ=50.71;MQ0=3;MQRankSum=-1.733;QD=15.07;ReadPosRankSum=1.628;VQSLOD=1.6444;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	1/1:4,0:5:3.01:89,3,0	./.	0/0:13,0:3:2.37:0,2,8	1/1:7,4:12:2.99:23,3,0	./.	./.	1/1:22,0:22:0.94:1,1,0	./.	1/1:6,0:8:9.03:241,9,0	./.	./.	./.	./.	0/0:5,1:7:0:0,0,0	1/1:2,2:4:3.01:54,3,0	1/1:19,1:18:5.82:106,6,0	1/1:9,0:11:12.04:340,12,0	1/1:17,0:17:9.50:209,10,0	1/1:10,2:12:3.01:132,3,0	./.	./.	./.	./.	1/1:12,4:15:3.01:132,3,0	1/1:12,3:15:20.99:651,21,0	1/1:8,2:10:11.78:333,12,0	1/1:13,2:15:12.04:314,12,0
chr10	39755456	.	CAT	C	563.77	PASS	AB=1.000;AC=33;AF=0.717;AN=46;BaseQRankSum=-1.515;DP=267;FS=0.000;HRun=0;HaplotypeScore=122.1170;InbreedingCoeff=0.1070;MQ=33.60;MQ0=3;MQRankSum=0.745;QD=2.59;ReadPosRankSum=3.183;VQSLOD=1.9075;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:5:0.80:0,1,2	1/1:3,0:3:5.06:21,5,0	./.	./.	1/1:19,0:19:1.97:7,2,0	./.	1/1:0,3:3:6.01:55,6,0	1/1:34,0:29:37.11:106,37,0	1/1:3,3:6:2.90:28,3,0	1/1:15,0:13:19.41:81,19,0	1/1:9,0:9:2.84:9,3,0	0/0:3,0:3:0:0,0,0	0/0:2,0:2:2.92:0,3,17	1/1:5,0:4:0.94:2,1,0	1/1:9,0:9:6.83:23,7,0	1/1:10,0:10:4.38:13,4,0	0/0:15,0:12:0.02:0,0,25	0/1:10,0:9:3.60:46,0,4	0/1:19,0:19:1.11:59,0,1	1/1:10,0:8:5.05:21,5,0	1/1:6,0:5:2.03:7,2,0	1/1:5,0:5:2.37:8,2,0	./.	./.	1/1:20,0:20:8.43:32,8,0	0/1:17,0:16:17.16:80,0,17	0/1:12,0:12:8.09:63,0,8	0/1:6,0:6:8.49:14,0,8
chr10	39755468	.	CAT	C	5732.05	PASS	AB=0.643;AC=47;AF=0.870;AN=54;BaseQRankSum=-0.737;DP=323;FS=3.911;HRun=0;HaplotypeScore=103.0854;InbreedingCoeff=0.3859;MQ=42.53;MQ0=6;MQRankSum=-0.280;QD=19.63;ReadPosRankSum=3.753;VQSLOD=4.8294;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,8:9:18.06:237,18,0	1/1:0,3:3:6.02:80,6,0	1/1:10,0:2:1.25:3,1,0	0/0:20,0:4:6.02:0,6,73	1/1:3,14:17:2.76:40,3,0	1/1:1,3:4:3.01:40,3,0	1/1:0,5:5:9.03:107,9,0	1/1:10,38:40:99:1352,105,0	0/1:4,5:9:36.15:64,0,36	1/1:0,16:15:39.13:511,39,0	1/1:1,9:10:6.02:80,6,0	0/0:4,0:4:3.01:0,3,44	1/1:0,3:3:6.02:80,6,0	1/1:2,5:6:9.03:114,9,0	1/1:0,14:15:18.55:311,19,0	1/1:0,12:12:11.91:159,12,0	1/1:0,11:8:6:80,6,0	1/1:0,11:10:27.09:359,27,0	1/1:5,18:22:51.15:658,51,0	1/1:1,10:9:6.02:80,6,0	1/1:0,7:6:2.66:40,3,0	1/1:0,3:3:3.01:40,3,0	./.	0/0:2,0:2:6.02:0,6,90	1/1:0,18:18:14.80:199,15,0	1/1:1,17:17:45.13:581,45,0	1/1:0,12:12:33.11:437,33,0	1/1:0,9:9:6.02:80,6,0
chr10	39757001	.	T	TTTG	2186.52	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=11.153;DP=622;FS=33.413;HRun=0;HaplotypeScore=99.6796;InbreedingCoeff=0.8340;MQ=63.68;MQ0=1;MQRankSum=0.332;QD=17.35;ReadPosRankSum=2.221;VQSLOD=1.4626;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:36,0:36:7.84:153,8,0	0/0:19,0:19:48.15:0,48,656	0/0:18,0:15:26.98:0,27,335	0/0:14,0:11:21.07:0,21,286	0/0:36,0:36:81.26:0,81,1144	1/1:7,13:21:33.11:671,33,0	1/1:2,17:19:48.16:976,48,0	0/0:31,0:31:62.64:0,63,773	1/1:4,10:15:18.06:366,18,0	0/0:24,0:24:51.16:0,51,703	0/0:26,0:26:54.16:0,54,744	0/0:17,0:17:50.65:0,51,681	1/1:14,0:14:0.10:69,0,0	0/1:21,0:21:5.02:116,0,5	0/0:17,0:17:33.11:0,33,474	0/0:22,0:22:60.20:0,60,862	0/0:28,0:28:69.16:0,69,929	0/0:21,0:21:45.09:0,45,587	0/0:14,0:14:24.06:0,24,321	0/0:25,0:25:66.04:0,66,886	0/0:21,0:21:39.12:0,39,542	0/0:24,0:24:60.19:0,60,847	0/0:18,0:18:42.09:0,42,562	0/0:21,0:21:57.15:0,57,779	0/0:31,0:31:87.28:0,87,1219	0/0:24,0:23:58.41:0,58,760	0/0:21,0:21:60.20:0,60,863	0/0:24,0:24:54.13:0,54,719
chr10	39757599	.	GAA	G	12524.93	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-5.090;DP=665;FS=2.171;HRun=13;HaplotypeScore=93.7249;InbreedingCoeff=0.9718;MQ=75.28;MQ0=4;MQRankSum=-4.217;QD=19.82;ReadPosRankSum=3.577;VQSLOD=4.6020;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,35:41:96.10:931,96,0	1/1:1,5:6:12:116,12,0	0/0:19,0:19:20.36:0,20,187	0/0:12,0:11:14.88:0,15,176	1/1:4,23:28:63.02:610,63,0	1/1:3,22:27:41.62:489,42,0	1/1:4,15:19:45.04:436,45,0	1/1:6,18:24:51:488,51,0	1/1:2,18:20:33:320,33,0	1/1:7,22:28:57:545,57,0	1/1:6,16:23:47.48:431,47,0	1/1:3,0:30:65.83:285,66,0	1/1:4,24:28:66.07:640,66,0	1/1:5,27:32:75.08:727,75,0	1/1:6,18:25:43.07:467,43,0	1/1:9,21:30:53.76:506,54,0	1/1:3,33:36:84.10:815,84,0	1/1:1,23:24:60.09:582,60,0	1/1:5,11:16:32.77:286,33,0	1/1:2,22:24:60.05:582,60,0	1/1:7,30:37:78.07:757,78,0	1/1:3,18:21:47.78:448,48,0	1/1:2,0:13:30.18:130,30,0	1/1:2,1:17:30.43:148,30,0	1/1:5,20:25:54.06:524,54,0	1/1:2,20:22:57.05:553,57,0	1/1:3,17:19:41.99:397,42,0	1/1:0,11:12:26.98:311,27,0
chr10	39757703	.	A	AT	1428.59	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-7.225;DP=572;FS=4.597;HRun=7;HaplotypeScore=55.0049;InbreedingCoeff=0.9671;MQ=78.27;MQ0=0;MQRankSum=0.808;QD=25.06;ReadPosRankSum=-0.628;VQSLOD=3.9044;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:93.14:0,93,898	0/0:9,0:9:27.04:0,27,260	0/0:11,0:11:17.97:0,18,174	0/0:18,0:18:7.16:0,7,314	0/0:22,0:22:54.08:0,54,521	0/0:30,0:30:81.12:0,81,782	0/0:19,0:19:51.08:0,51,493	0/0:35,0:35:84.12:0,84,807	0/0:20,0:20:57.09:0,57,550	0/0:26,0:26:69.11:0,69,666	0/0:16,0:16:42.07:0,42,405	1/1:11,13:24:48.12:557,48,0	0/0:24,0:24:63.09:0,63,608	0/0:18,0:18:51.08:0,51,492	0/0:20,0:20:57.09:0,57,550	0/0:10,0:10:30.05:0,30,290	0/0:32,0:32:93.15:0,93,898	0/0:26,0:26:69.10:0,69,666	0/0:28,0:28:72.11:0,72,695	0/0:17,0:17:42.06:0,42,406	0/0:23,0:23:66.06:0,66,624	0/0:13,0:13:36.06:0,36,348	1/1:1,14:15:39.12:471,39,0	1/1:1,17:18:45.14:544,45,0	0/0:24,0:24:63.10:0,63,608	0/0:14,0:14:42.07:0,42,406	0/0:13,0:13:39.03:0,39,368	0/0:13,0:13:39.06:0,39,377
chr10	39757966	.	GC	G	6957.68	PASS	AC=50;AF=0.926;AN=54;BaseQRankSum=1.678;DP=293;FS=3.266;HRun=1;HaplotypeScore=370.1156;InbreedingCoeff=0.6259;MQ=35.38;MQ0=0;MQRankSum=-1.215;QD=23.99;ReadPosRankSum=4.359;VQSLOD=3.4156;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,18:20:50.20:493,50,0	1/1:0,6:6:17.66:172,18,0	0/0:1,0:2:3.48:0,3,48	./.	1/1:2,14:16:36.33:332,36,0	1/1:1,8:9:16.42:247,16,0	1/1:2,18:20:22.70:284,23,0	1/1:0,9:8:21.01:237,21,0	1/1:0,8:8:24.07:286,24,0	1/1:4,18:22:35.42:426,35,0	1/1:2,8:10:19.84:200,20,0	1/1:0,7:7:20.96:208,21,0	1/1:1,9:10:29.96:294,30,0	1/1:1,14:15:30.99:363,31,0	1/1:0,12:11:30.02:327,30,0	1/1:0,12:12:36.11:434,36,0	1/1:2,17:19:41.47:438,41,0	1/1:1,6:7:18:195,18,0	1/1:1,12:13:33.76:309,34,0	1/1:0,11:11:23.58:296,24,0	1/1:0,5:5:9.28:110,9,0	1/1:1,11:12:18.70:211,19,0	0/0:0,1:1:2.22:0,2,7	1/1:0,7:6:8.98:88,9,0	1/1:2,14:16:38.83:429,39,0	1/1:0,9:9:26.94:286,27,0	1/1:3,7:10:21.49:221,21,0	1/1:3,2:5:2.79:71,3,0
chr10	39757969	.	TC	T	6925.50	PASS	AC=50;AF=0.926;AN=54;BaseQRankSum=-0.715;DP=272;FS=1.867;HRun=1;HaplotypeScore=357.1576;InbreedingCoeff=0.5617;MQ=35.86;MQ0=0;MQRankSum=0.335;QD=25.75;ReadPosRankSum=1.113;VQSLOD=3.3522;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:18:41.20:421,41,0	1/1:6,0:6:17.83:172,18,0	0/0:2,0:2:0.47:0,0,1	./.	1/1:14,0:14:26.10:264,26,0	1/1:8,0:8:18.74:253,19,0	1/1:18,0:18:22.01:272,22,0	1/1:9,0:8:21.01:233,21,0	1/1:8,0:8:24.08:296,24,0	1/1:18,1:19:34.98:454,35,0	1/1:8,1:9:16.57:205,17,0	1/1:7,0:7:20.99:224,21,0	1/1:9,0:10:29.97:295,30,0	1/1:14,1:15:33.07:378,33,0	1/1:12,0:11:32.71:348,33,0	1/1:12,0:12:36.11:435,36,0	1/1:17,0:17:35.80:398,36,0	1/1:6,0:6:17.97:188,18,0	1/1:12,0:12:33.75:310,34,0	1/1:11,0:11:24.55:291,25,0	1/1:5,0:5:9.97:110,10,0	1/1:11,0:11:25.63:243,26,0	0/0:1,0:1:2.04:0,2,6	1/1:7,0:6:6.02:73,6,0	1/1:15,0:15:41.98:447,42,0	1/1:9,0:9:26.92:282,27,0	1/1:7,2:8:24:260,24,0	1/1:2,0:2:6.02:73,6,0
chr10	39757973	.	AGG	A	8468.38	PASS	AC=52;AF=0.963;AN=54;BaseQRankSum=1.084;DP=272;FS=7.832;HRun=3;HaplotypeScore=356.4949;InbreedingCoeff=0.4450;MQ=35.86;MQ0=0;MQRankSum=0.146;QD=31.36;ReadPosRankSum=0.084;VQSLOD=2.0383;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,18:18:43.09:516,43,0	1/1:2,4:6:11.99:142,12,0	0/0:2,0:2:0.89:0,1,2	./.	1/1:0,14:14:27.51:320,28,0	1/1:0,8:8:23.29:312,23,0	1/1:0,18:18:38.97:430,39,0	1/1:1,8:8:18.01:218,18,0	1/1:0,8:8:24.08:346,24,0	1/1:0,19:19:41.68:563,42,0	1/1:2,7:9:20.98:263,21,0	1/1:0,7:7:18.06:254,18,0	1/1:2,8:10:27.08:346,27,0	1/1:3,12:15:33.11:481,33,0	1/1:1,11:11:30.09:410,30,0	1/1:0,12:12:36.12:522,36,0	1/1:0,17:17:38.17:491,38,0	1/1:1,5:6:12.04:176,12,0	1/1:0,12:12:35.57:431,36,0	1/1:2,9:11:25.90:356,26,0	1/1:0,5:5:14.94:174,15,0	1/1:0,11:11:26.97:332,27,0	1/1:0,1:1:1.82:5,2,0	1/1:0,7:6:6.02:85,6,0	1/1:1,14:15:42.14:609,42,0	1/1:0,9:9:27.05:348,27,0	1/1:2,7:9:18.06:250,18,0	1/1:0,2:2:6.02:90,6,0
chr10	39757979	.	GC	G	6978.27	PASS	AB=1.000;AC=51;AF=0.944;AN=54;BaseQRankSum=-1.080;DP=287;FS=3.901;HRun=3;HaplotypeScore=385.4945;InbreedingCoeff=0.5438;MQ=32.26;MQ0=0;MQRankSum=0.658;QD=24.40;ReadPosRankSum=-0.211;VQSLOD=2.3589;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,20:20:41.52:424,42,0	1/1:0,4:4:11.86:113,12,0	0/1:1,0:1:0:0,0,0	./.	1/1:0,16:16:15.30:280,15,0	1/1:0,11:11:18.61:253,19,0	1/1:1,20:21:25.53:343,26,0	1/1:0,9:8:20.99:227,21,0	1/1:1,8:9:21.07:259,21,0	1/1:2,20:22:41.32:488,41,0	1/1:0,8:8:18.03:199,18,0	1/1:1,7:8:18.06:220,18,0	1/1:0,11:11:27.07:311,27,0	1/1:1,13:14:30.09:366,30,0	1/1:0,11:10:30.07:347,30,0	1/1:1,12:13:33.10:394,33,0	1/1:0,17:17:35.80:407,36,0	1/1:0,5:5:12.04:147,12,0	1/1:1,13:14:38.38:358,38,0	1/1:0,11:11:25.01:285,25,0	1/1:0,6:6:12.24:121,12,0	1/1:3,9:12:22.73:224,23,0	0/0:0,1:1:1.82:0,2,5	1/1:0,7:6:6.02:74,6,0	1/1:0,15:15:42.13:504,42,0	1/1:0,11:11:29.90:320,30,0	1/1:0,7:7:18.04:203,18,0	1/1:0,3:3:9.03:111,9,0
chr10	39757986	.	TGG	T	8313.55	PASS	AC=52;AF=1.000;AN=52;BaseQRankSum=1.226;DP=288;FS=2.168;HRun=3;HaplotypeScore=408.3632;InbreedingCoeff=0.1735;MQ=28.68;MQ0=0;MQRankSum=-1.218;QD=28.87;ReadPosRankSum=1.133;VQSLOD=2.3552;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,15:20:37.21:433,37,0	1/1:0,2:2:5.98:55,6,0	./.	./.	1/1:3,13:16:17.70:280,18,0	1/1:1,11:12:32.47:439,32,0	1/1:2,19:21:42.58:494,43,0	1/1:2,8:9:21.01:255,21,0	1/1:0,8:8:24.08:343,24,0	1/1:2,19:21:40.74:568,41,0	1/1:1,8:9:20.55:245,21,0	1/1:0,9:9:27.09:390,27,0	1/1:1,10:11:30.10:427,30,0	1/1:0,13:13:36.12:519,36,0	1/1:2,10:11:24.08:338,24,0	1/1:1,12:13:33.11:481,33,0	1/1:5,12:17:29.38:396,29,0	1/1:1,5:6:15.05:217,15,0	1/1:4,11:15:37.38:434,37,0	1/1:2,9:11:19.88:254,20,0	1/1:0,7:7:14.95:176,15,0	1/1:1,9:10:27.01:324,27,0	1/1:0,1:1:2.22:7,2,0	1/1:0,7:6:9.03:124,9,0	1/1:1,15:16:36.12:517,36,0	1/1:1,10:11:23.44:344,23,0	1/1:2,5:7:9.03:121,9,0	1/1:0,3:3:9.03:132,9,0
chr10	39758003	.	CCG	C	9919.24	PASS	AC=52;AF=0.963;AN=54;BaseQRankSum=0.834;DP=258;FS=0.000;HRun=0;HaplotypeScore=350.7378;InbreedingCoeff=0.5114;MQ=36.40;MQ0=0;MQRankSum=-0.707;QD=38.75;ReadPosRankSum=0.654;VQSLOD=3.1506;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,18:19:38.30:460,38,0	1/1:0,5:5:15.04:199,15,0	./.	0/0:1,0:2:3:0,3,26	1/1:0,8:8:16.83:197,17,0	1/1:0,12:12:35.91:529,36,0	1/1:0,17:17:44.26:574,44,0	1/1:0,11:11:33.09:508,33,0	1/1:0,8:8:24.08:387,24,0	1/1:0,16:16:39.08:511,39,0	1/1:0,4:4:9.03:145,9,0	1/1:0,10:10:27.09:432,27,0	1/1:0,10:10:30.10:479,30,0	1/1:1,14:15:45.15:718,45,0	1/1:0,11:11:30.10:453,30,0	1/1:0,10:10:30.10:482,30,0	1/1:0,17:17:40.44:591,40,0	1/1:0,5:5:15.05:243,15,0	1/1:0,9:9:27.08:398,27,0	1/1:0,4:4:11.40:153,11,0	1/1:0,6:6:12:142,12,0	1/1:1,7:8:24.06:319,24,0	1/1:0,1:1:2.68:11,3,0	1/1:0,7:6:6.02:97,6,0	1/1:0,17:17:51.17:800,51,0	1/1:0,12:12:33.09:487,33,0	1/1:0,9:9:24.08:363,24,0	1/1:0,5:5:15.05:242,15,0
chr10	39758031	.	C	CG	10577.95	PASS	AB=0.718;AC=54;AF=0.964;AN=56;BaseQRankSum=-0.415;DP=353;FS=2.652;HRun=0;HaplotypeScore=316.5797;InbreedingCoeff=-0.0548;MQ=41.02;MQ0=1;MQRankSum=0.308;QD=29.97;ReadPosRankSum=2.589;VQSLOD=3.6900;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,18:19:35.50:552,35,0	1/1:1,6:7:16.82:211,17,0	0/1:3,3:5:22.49:42,0,22	0/1:7,3:6:14.21:135,0,14	1/1:2,10:12:17.82:206,18,0	1/1:0,9:9:18.05:263,18,0	1/1:0,19:19:32.17:507,32,0	1/1:8,23:31:81.10:1136,81,0	1/1:0,9:9:24.08:363,24,0	1/1:4,11:15:42.04:576,42,0	1/1:5,7:12:11.41:185,11,0	1/1:1,8:9:18.06:276,18,0	1/1:0,14:14:36.12:556,36,0	1/1:1,21:22:57.19:877,57,0	1/1:1,12:13:33.10:467,33,0	1/1:0,9:9:27.09:419,27,0	1/1:0,16:16:41.89:584,42,0	1/1:1,7:8:24.06:351,24,0	1/1:3,8:11:24.29:332,24,0	1/1:7,4:11:7.80:133,8,0	1/1:3,8:11:4.24:64,4,0	1/1:1,6:7:9.23:180,9,0	1/1:1,6:7:8.51:91,9,0	1/1:2,10:11:7.81:136,8,0	1/1:0,18:18:42.14:660,42,0	1/1:4,11:15:36.04:490,36,0	1/1:3,12:13:33.11:505,33,0	1/1:0,6:6:18.06:281,18,0
chr10	39758095	.	GTGTGTGTGTA	G	1180.33	PASS	AB=0.977;AC=20;AF=0.370;AN=54;BaseQRankSum=2.351;DP=433;FS=25.954;HRun=0;HaplotypeScore=203.1357;InbreedingCoeff=-0.2577;MQ=36.89;MQ0=24;MQRankSum=-4.307;QD=4.29;ReadPosRankSum=4.440;VQSLOD=0.9844;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:30:17.89:0,18,103	0/1:2,0:1:0:0,0,0	1/1:7,0:3:6.11:18,6,0	0/1:14,0:5:6.84:12,0,7	0/1:19,1:19:45.80:46,0,117	0/1:9,0:9:14.30:14,0,18	0/1:21,0:16:40.22:40,0,48	0/1:11,0:10:33.54:34,0,51	0/0:15,0:14:12.70:0,13,115	0/1:21,0:20:99:161,0,103	0/0:10,0:10:3.28:0,3,37	0/0:8,0:8:3.47:0,3,26	0/0:14,0:13:7.72:0,8,36	0/1:17,0:17:11.64:41,0,12	0/1:11,1:12:7.96:72,0,8	./.	0/1:21,0:20:50.70:51,0,154	0/1:23,1:22:47.23:372,0,47	0/0:6,0:6:11.02:0,11,63	0/1:13,2:15:5.68:49,0,6	0/1:33,0:30:58.69:67,0,59	1/1:4,1:4:3.01:74,3,0	0/0:14,0:14:18:0,18,333	0/0:25,0:23:39.23:0,39,602	0/1:17,0:16:20.30:20,0,112	0/1:15,0:14:71.82:72,0,94	0/0:22,0:22:34.02:0,34,190	0/1:10,1:10:30.84:190,0,31
chr10	39758097	.	GTGTGTGTA	G	1101.53	PASS	AB=0.968;AC=22;AF=0.423;AN=52;BaseQRankSum=2.019;DP=433;FS=41.641;HRun=0;HaplotypeScore=191.8762;InbreedingCoeff=-0.4199;MQ=37.35;MQ0=25;MQRankSum=-4.285;QD=3.37;ReadPosRankSum=3.779;VQSLOD=1.5349;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:30,2:29:12.26:12,0,49	./.	0/1:9,0:4:8.49:8,0,25	0/1:14,0:6:9.38:9,0,36	0/1:16,3:18:36.62:37,0,110	0/1:8,0:8:18.34:56,0,18	0/1:21,0:16:5.85:6,0,59	0/1:11,0:10:34.52:35,0,46	0/1:15,0:14:34.27:40,0,34	0/1:20,2:21:99:197,0,102	0/1:10,0:10:3.48:3,0,33	0/0:8,0:8:3.47:0,3,26	0/1:14,0:13:18.21:62,0,18	1/1:14,2:16:5.15:47,5,0	0/1:14,0:14:7.98:42,0,8	./.	0/1:18,1:18:45.62:46,0,154	0/1:16,8:22:42.85:468,0,43	0/0:6,0:6:9.52:0,10,60	0/1:15,0:15:9.24:9,0,25	0/1:33,0:30:23.04:23,0,69	1/1:5,0:4:3.01:43,3,0	0/0:14,0:14:15.01:0,15,235	0/0:26,0:24:41.85:0,42,470	0/0:17,0:16:19.06:0,19,151	0/1:15,0:14:7.08:7,0,118	0/0:22,0:22:34.02:0,34,190	0/1:11,0:10:44.71:99,0,45
chr10	39758101	.	GTGTA	G	653.14	PASS	AB=0.983;AC=18;AF=0.346;AN=52;BaseQRankSum=0.368;DP=442;FS=49.008;HRun=0;HaplotypeScore=170.5492;InbreedingCoeff=-0.3141;MQ=38.34;MQ0=23;MQRankSum=-6.153;QD=2.20;ReadPosRankSum=2.813;VQSLOD=0.8067;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:32,0:30:32.84:33,0,68	./.	0/1:13,0:6:19.34:29,0,19	0/1:15,0:8:10.21:10,0,63	0/0:20,0:19:8.76:0,9,133	0/1:9,0:9:18.69:23,0,19	0/0:22,0:17:14.97:0,15,88	0/1:10,0:9:37.99:38,0,43	0/1:11,5:15:7.04:166,0,7	0/1:23,0:22:67.92:68,0,114	0/0:10,0:10:13.62:0,14,75	0/0:9,0:9:6.46:0,6,50	0/1:14,0:13:17.26:53,0,17	1/1:16,0:16:9.14:51,9,0	0/1:15,0:15:11.03:11,0,19	./.	0/1:17,0:16:0.77:1,0,154	0/1:26,0:25:79.74:215,0,80	0/0:7,0:7:8.45:0,8,58	0/1:15,0:15:9.27:9,0,24	0/1:33,0:29:6.45:6,0,70	0/1:6,0:5:8.92:9,0,11	0/0:12,2:14:14.97:0,15,122	0/1:26,0:25:42.86:43,0,194	0/0:17,0:16:27.23:0,27,162	0/0:16,0:15:30.65:0,31,166	0/0:17,0:17:34.02:0,34,190	0/1:10,0:10:38.10:38,0,57
chr10	39758103	.	GTA	G	496.04	PASS	AB=0.990;AC=16;AF=0.308;AN=52;BaseQRankSum=0.446;DP=449;FS=50.970;HRun=0;HaplotypeScore=158.8458;InbreedingCoeff=-0.2411;MQ=39.71;MQ0=23;MQRankSum=-6.490;QD=1.71;ReadPosRankSum=2.431;VQSLOD=1.2991;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:32,0:30:35.20:35,0,67	./.	0/1:17,0:10:30.30:30,0,33	0/1:17,0:9:7.22:7,0,84	0/0:20,0:19:21.99:0,22,147	0/1:9,0:9:8.44:8,0,19	0/1:24,0:19:3.14:3,0,80	0/1:12,0:11:33.58:34,0,60	0/1:16,0:15:7.94:78,0,8	0/1:24,0:23:35.30:35,0,125	0/0:10,0:10:17.21:0,17,89	0/0:9,0:9:6.46:0,6,50	0/1:12,0:11:16.68:38,0,17	1/1:16,0:16:9.18:51,9,0	0/0:14,0:14:2:0,2,22	./.	0/0:18,0:17:15.99:0,16,179	0/1:28,0:26:89.22:145,0,89	0/0:6,0:6:8.49:0,8,58	0/1:14,0:14:8.86:9,0,24	0/1:33,0:29:1.10:1,0,82	0/0:8,0:7:7.56:0,8,43	0/0:14,0:14:14.97:0,15,122	0/1:22,4:25:99:155,0,167	0/0:15,0:15:28.09:0,28,164	0/0:15,0:14:17.22:0,17,126	0/0:17,0:17:34.01:0,34,190	0/1:10,0:10:11.36:11,0,57
chr10	39758118	.	CGT	C	2808.25	PASS	AB=0.988;AC=40;AF=0.741;AN=54;BaseQRankSum=0.125;DP=508;FS=75.552;HRun=0;HaplotypeScore=157.5106;InbreedingCoeff=0.4301;MQ=47.67;MQ0=14;MQRankSum=2.296;QD=6.90;ReadPosRankSum=-5.165;VQSLOD=-0.4902;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:32,1:32:3.97:184,4,0	./.	0/0:26,0:18:52.49:0,52,658	0/0:26,0:18:50.99:0,51,738	1/1:19,2:21:11.22:130,11,0	1/1:9,2:11:5.36:70,5,0	1/1:30,1:26:21.14:164,21,0	1/1:25,0:25:35.02:408,35,0	1/1:13,3:15:11.54:123,12,0	1/1:23,3:25:24.35:197,24,0	1/1:11,0:11:13.51:110,14,0	0/0:8,0:8:6.02:0,6,101	1/1:13,0:12:0.96:36,1,0	1/1:13,1:14:9.40:76,9,0	1/1:22,1:23:27.77:278,28,0	1/1:14,0:14:12.01:124,12,0	0/1:19,1:19:9.43:129,0,9	1/1:28,4:30:8.64:326,9,0	0/1:9,0:9:6.05:53,0,6	1/1:14,0:14:6.02:70,6,0	1/1:27,0:26:3.12:74,3,0	1/1:7,1:8:10.61:84,11,0	0/0:12,0:12:27.08:0,27,409	0/0:27,0:26:48.54:0,49,734	1/1:17,0:17:3.79:117,4,0	0/1:17,0:16:38.88:95,0,39	0/1:17,0:17:19:36,0,19	1/1:6,2:8:6.04:97,6,0
chr10	39758727	.	A	ATT	7203.73	PASS	AB=0.579;AC=45;AF=0.804;AN=56;BaseQRankSum=3.228;DP=587;FS=3.839;HRun=9;HaplotypeScore=90.9210;InbreedingCoeff=0.8883;MQ=87.24;MQ0=0;MQRankSum=-5.292;QD=15.43;ReadPosRankSum=2.349;VQSLOD=3.0904;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,1:26:52.92:217,53,0	1/1:0,0:10:24.95:85,25,0	0/0:27,0:27:53.83:0,54,566	0/0:20,0:20:44.06:0,44,417	1/1:1,0:27:64.88:222,65,0	1/1:2,0:14:25.42:86,25,0	1/1:2,0:23:44.92:154,45,0	1/1:5,19:29:69.17:945,69,0	1/1:2,0:18:39.80:137,40,0	1/1:2,0:20:27.96:133,28,0	0/1:3,0:11:5.36:53,0,5	0/0:26,0:26:63.11:0,63,670	1/1:5,1:20:6.26:92,6,0	1/1:3,0:26:23.75:148,24,0	1/1:0,0:25:54.77:188,55,0	1/1:2,0:22:39.93:137,40,0	1/1:2,0:28:49.78:171,50,0	1/1:0,0:12:27.45:94,27,0	1/1:4,18:23:53.67:790,54,0	1/1:1,26:29:80.20:1145,80,0	1/1:3,15:18:36.12:554,36,0	1/1:3,0:22:42.30:145,42,0	0/0:16,0:16:36.07:0,36,383	0/0:30,0:31:71.88:0,72,746	1/1:5,0:16:24.95:86,25,0	1/1:2,9:13:26.56:353,27,0	1/1:3,21:24:54.18:806,54,0	1/1:1,10:11:30.10:462,30,0
chr10	39759791	.	CAGAGAGAGAGAGAGAGAG	C	1425.13	PASS	AC=4;AF=0.083;AN=48;BaseQRankSum=4.948;DP=514;FS=25.932;HRun=0;HaplotypeScore=230.7319;InbreedingCoeff=0.6954;MQ=63.49;MQ0=7;MQRankSum=-3.803;QD=34.76;ReadPosRankSum=-0.430;VQSLOD=1.5042;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:18.06:0,18,300	0/0:4,0:3:6.02:0,6,345	./.	./.	0/0:9,0:9:9.03:0,9,248	0/0:24,0:24:33.11:0,33,2217	0/0:20,0:26:14.30:0,14,1095	0/0:23,0:22:15.14:0,15,484	0/0:22,0:22:30.99:0,31,1779	0/0:14,0:14:15.05:0,15,850	0/0:9,0:9:3.01:0,3,121	0/0:23,0:23:23.58:0,24,1518	1/1:11,9:20:18.06:871,18,0	1/1:11,8:21:15.52:668,16,0	0/0:13,0:21:27.09:0,27,1233	0/0:15,0:24:27.09:0,27,576	0/0:17,0:25:25.64:0,26,636	0/0:17,0:22:45.15:0,45,2283	0/0:13,0:13:16.29:0,16,316	0/0:5,0:6:6.02:0,6,342	0/0:24,0:24:24.08:0,24,1444	./.	./.	0/0:29,0:35:30.95:0,31,1636	0/0:14,0:13:9.03:0,9,538	0/0:14,0:14:9.50:0,10,506	0/0:11,0:15:27.09:0,27,1699	0/0:5,0:5:6.02:0,6,386
chr10	39760026	.	A	ATGTG	3777.49	PASS	AB=0.971;AC=42;AF=0.875;AN=48;BaseQRankSum=0.483;DP=566;FS=4.342;HRun=0;HaplotypeScore=142.3119;InbreedingCoeff=0.3504;MQ=57.27;MQ0=7;MQRankSum=-0.727;QD=8.62;ReadPosRankSum=0.883;VQSLOD=2.9920;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:27:9.94:178,0,10	1/1:8,0:11:5.28:68,5,0	./.	./.	1/1:23,0:23:8.94:127,9,0	0/0:23,0:22:8.99:0,9,96	0/0:20,0:20:12.44:0,12,155	1/1:17,0:17:13.80:121,14,0	0/1:31,0:33:44.43:44,0,136	1/1:32,0:32:24.48:364,24,0	1/1:6,0:6:9.03:162,9,0	1/1:16,0:16:15.01:221,15,0	1/1:13,0:16:3.01:52,3,0	1/1:17,0:17:6.02:129,6,0	./.	1/1:13,0:13:15.01:238,15,0	1/1:28,0:27:21.02:296,21,0	1/1:16,0:15:10.28:162,10,0	1/1:28,0:27:6.01:77,6,0	./.	1/1:38,0:36:6.02:100,6,0	1/1:17,0:16:15.05:288,15,0	1/1:13,0:13:9.02:112,9,0	1/1:13,9:24:14.79:264,15,0	1/1:18,0:17:6.02:99,6,0	1/1:21,0:21:27.07:455,27,0	1/1:15,0:15:9.01:107,9,0	1/1:8,0:8:6.49:112,6,0
chr10	39763117	.	CTTCT	C	3056.36	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=5.796;DP=585;FS=3.557;HRun=0;HaplotypeScore=137.5629;InbreedingCoeff=0.9590;MQ=58.12;MQ0=4;MQRankSum=-2.783;QD=36.39;ReadPosRankSum=0.635;VQSLOD=3.7142;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,8:16:30.43:394,30,0	0/0:9,0:9:21.58:0,22,497	0/0:24,0:11:18.06:0,18,384	0/0:18,0:10:5.99:0,6,97	0/0:34,0:34:96.10:0,96,1843	1/1:7,9:16:45.14:739,45,0	1/1:14,3:16:45.12:669,45,0	0/0:38,0:38:72.23:0,72,1544	1/1:9,6:15:39.08:637,39,0	0/0:29,0:29:75.24:0,75,1594	0/0:15,0:15:36.07:0,36,779	0/0:18,0:18:36.09:0,36,605	1/1:6,7:13:33.09:515,33,0	1/1:4,3:7:18.06:289,18,0	0/0:14,0:14:36.02:0,36,612	0/0:18,0:18:45.10:0,45,915	0/0:23,0:22:42.14:0,42,862	0/0:19,0:19:36.09:0,36,724	0/0:20,0:20:45.07:0,45,828	0/0:30,0:30:81.23:0,81,1738	0/0:13,0:13:24.08:0,24,529	0/0:25,0:25:66.11:0,66,1164	0/0:39,0:39:73.34:0,73,1390	0/0:13,0:13:16.40:0,16,430	0/0:24,0:24:57.16:0,57,1178	0/0:24,0:24:8.38:0,8,1200	0/0:29,0:29:78.19:0,78,1633	0/0:25,0:25:72.20:0,72,1499
chr10	39763143	.	TTTTCTTTCTTTC	T	7206.90	PASS	AB=0.779;AC=25;AF=0.481;AN=52;BaseQRankSum=2.054;DP=609;FS=3.013;HRun=0;HaplotypeScore=214.0392;InbreedingCoeff=0.7107;MQ=49.78;MQ0=26;MQRankSum=-8.949;QD=26.69;ReadPosRankSum=1.106;VQSLOD=3.8341;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:13,0:13:32.08:32,0,48	0/0:8,0:11:19.06:0,19,561	./.	./.	1/1:11,25:37:48.16:1306,48,0	1/1:14,6:21:51.09:1580,51,0	1/1:12,0:11:1.58:108,2,0	0/0:39,0:35:24.05:0,24,398	1/1:9,7:16:17.98:534,18,0	0/0:12,0:26:51.17:0,51,1193	0/0:7,0:16:27.08:0,27,601	1/1:5,0:16:12.04:335,12,0	1/1:11,0:12:14.96:221,15,0	1/1:5,0:6:9.03:167,9,0	1/1:4,7:11:15.05:509,15,0	1/1:10,12:22:13.54:515,14,0	0/1:11,13:23:94.43:94,0,106	0/0:11,0:15:30.10:0,30,778	0/0:14,0:12:18.02:0,18,464	0/0:27,0:33:51.17:0,51,1270	0/0:14,0:15:24.08:0,24,577	1/1:9,17:25:36.12:1242,36,0	1/1:11,0:32:17.90:461,18,0	0/1:11,0:22:19.75:103,0,20	0/0:12,0:21:45.14:0,45,1087	0/0:10,0:31:84.27:0,84,2059	0/0:22,0:32:66.19:0,66,1537	0/0:16,0:18:27.05:0,27,548
chr10	39763145	.	T	TC	328.43	PASS	AB=0.945;AC=7;AF=0.125;AN=56;BaseQRankSum=7.388;DP=605;FS=4.180;HRun=0;HaplotypeScore=131.5996;InbreedingCoeff=-0.1562;MQ=49.52;MQ0=30;MQRankSum=-6.558;QD=2.59;ReadPosRankSum=-4.808;VQSLOD=1.5689;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:12.62:0,13,277	0/0:10,0:10:29.74:0,30,284	0/0:37,0:4:12.04:0,12,154	0/0:26,0:2:3.01:0,3,42	0/1:34,0:34:23.82:24,0,721	0/1:12,10:22:99:247,0,198	0/1:12,1:12:38.49:38,0,349	0/0:37,0:33:98.08:0,98,1311	0/0:15,1:16:16.80:0,17,396	0/0:26,0:25:66.22:0,66,667	0/0:16,0:16:44.70:0,45,481	0/0:16,0:16:19.62:0,20,250	0/1:14,0:14:47.52:48,0,296	0/1:8,0:8:61.05:61,0,79	0/1:11,0:11:23.40:23,0,180	0/0:21,0:21:34.24:0,34,396	0/0:23,0:22:28.82:0,29,357	0/0:15,0:15:44.64:0,45,448	0/0:20,0:12:35.88:0,36,417	0/0:31,0:31:86.24:0,86,937	0/0:14,0:14:36.58:0,37,348	0/1:25,0:24:16.77:17,0,410	0/0:31,0:31:13.58:0,14,579	0/0:22,0:22:10.95:0,11,277	0/0:24,0:24:58.67:0,59,561	0/0:31,0:31:81.15:0,81,730	0/0:31,0:31:83.17:0,83,836	0/0:18,0:18:53.94:0,54,653
chr10	39763155	.	C	CT	556.38	PASS	AB=0.915;AC=8;AF=0.143;AN=56;BaseQRankSum=5.488;DP=587;FS=2.938;HRun=3;HaplotypeScore=129.8119;InbreedingCoeff=0.0085;MQ=49.93;MQ0=34;MQRankSum=-4.507;QD=3.81;ReadPosRankSum=-3.319;VQSLOD=-0.7500;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:19.10:0,19,231	0/0:11,0:11:32.10:0,32,251	1/1:30,0:2:2.94:18,3,0	0/0:24,0:1:3.01:0,3,36	0/1:32,0:32:99:159,0,439	0/1:11,12:23:96.79:407,0,97	0/1:8,2:9:58.51:59,0,199	0/0:34,0:29:78.16:0,78,892	0/0:14,1:15:12.98:0,13,244	0/0:26,0:25:70.41:0,70,594	0/0:20,0:20:53.15:0,53,516	0/0:15,0:15:19.41:0,19,147	0/0:14,0:17:3.52:0,4,212	0/0:10,0:11:6.22:0,6,121	0/1:10,0:10:19.28:19,0,49	0/1:18,0:18:4.18:4,0,156	0/0:22,0:21:23.56:0,24,263	0/0:13,0:13:38.06:0,38,314	0/0:20,0:10:26.54:0,27,243	0/0:30,0:30:75.54:0,76,622	0/0:16,0:16:41.37:0,41,383	0/1:23,0:22:17.45:17,0,147	0/0:28,0:28:27.88:0,28,253	0/0:21,0:21:8.61:0,9,154	0/0:23,0:23:64.11:0,64,481	0/0:32,0:32:93.32:0,93,735	0/0:36,0:35:93.88:0,94,793	0/0:15,0:15:41.57:0,42,411
chr10	39763157	.	T	TC	299.17	PASS	AB=0.904;AC=8;AF=0.143;AN=56;BaseQRankSum=6.090;DP=576;FS=0.000;HRun=0;HaplotypeScore=130.0213;InbreedingCoeff=0.0349;MQ=50.24;MQ0=30;MQRankSum=-1.875;QD=2.27;ReadPosRankSum=-3.468;VQSLOD=1.8524;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:10,1:11:10.42:10,0,265	0/0:12,0:12:32.44:0,32,301	1/1:27,0:2:3:29,3,0	0/0:23,0:1:3.01:0,3,31	0/1:32,0:32:20.73:21,0,576	0/1:23,0:23:99:136,0,152	0/1:10,0:9:9.19:9,0,249	0/0:34,0:29:84.23:0,84,1115	0/0:15,0:15:33.33:0,33,350	0/0:26,0:25:74.09:0,74,712	0/0:20,0:20:56.54:0,57,626	0/0:14,0:14:19.42:0,19,166	0/1:12,5:17:99:147,0,227	0/1:7,4:11:67.40:76,0,67	0/0:11,0:11:19.45:0,19,140	0/0:17,0:17:24.73:0,25,224	0/0:21,0:20:23.75:0,24,307	0/0:13,0:13:38.46:0,38,361	0/0:17,0:9:26.77:0,27,295	0/0:31,0:31:86.06:0,86,835	0/0:16,0:16:47.62:0,48,491	0/0:23,0:22:45.12:0,45,313	0/0:27,0:27:36.52:0,37,342	0/0:19,0:19:22.92:0,23,237	0/0:22,0:22:64.88:0,65,554	0/0:32,0:32:94.42:0,94,841	0/0:36,0:35:99:0,104,990	0/0:15,0:15:44.76:0,45,497
chr10	39763163	.	C	CT	740.43	PASS	AB=0.659;AC=5;AF=0.093;AN=54;BaseQRankSum=1.773;DP=569;FS=9.549;HRun=3;HaplotypeScore=131.6497;InbreedingCoeff=0.1506;MQ=50.77;MQ0=27;MQRankSum=-1.824;QD=11.22;ReadPosRankSum=-2.895;VQSLOD=0.4777;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:8,3:11:60.19:99,0,60	0/0:12,0:12:35.13:0,35,300	1/1:24,0:2:2.04:6,2,0	./.	0/0:31,0:31:74.94:0,75,672	0/0:25,0:25:68.12:0,68,570	0/0:11,0:10:28.90:0,29,336	0/0:30,0:25:63.14:0,63,728	0/0:16,0:16:37.06:0,37,356	0/0:24,0:23:67.39:0,67,551	0/0:21,0:21:56.16:0,56,550	0/0:16,0:16:22.01:0,22,167	0/1:6,12:18:64.52:410,0,65	0/1:4,9:13:28.76:329,0,29	0/0:11,0:11:25.38:0,25,203	0/0:18,0:18:26.26:0,26,197	0/0:19,0:19:17.64:0,18,191	0/0:13,0:13:35.05:0,35,278	0/0:18,0:10:29.58:0,30,285	0/0:29,0:29:79.34:0,79,686	0/0:15,0:15:41.37:0,41,386	0/0:23,0:23:57.25:0,57,400	0/0:24,0:24:17.11:0,17,135	0/0:18,0:18:4.11:0,4,101	0/0:24,0:24:61.10:0,61,445	0/0:32,0:33:93.32:0,93,735	0/0:39,0:37:99:0,100,868	0/0:12,0:12:35.55:0,36,340
chr10	39763238	.	CCTTTCTTTCTTT	C	4376.18	PASS	AC=26;AF=0.500;AN=52;BaseQRankSum=-4.556;DP=588;FS=3.829;HRun=0;HaplotypeScore=207.5550;InbreedingCoeff=0.7729;MQ=57.45;MQ0=3;MQRankSum=-4.716;QD=16.03;ReadPosRankSum=-2.486;VQSLOD=3.5239;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:24:30.10:0,30,698	1/1:5,3:8:1.30:99,1,0	./.	./.	0/0:27,0:26:33.09:0,33,1087	0/0:13,0:29:42.14:0,42,1067	0/0:7,0:9:3.01:0,3,93	1/1:31,0:28:2.96:20,3,0	0/0:17,0:24:37.79:0,38,917	1/1:25,3:28:24.08:590,24,0	0/0:10,8:17:1.55:0,2,4	1/1:12,2:14:12.04:317,12,0	0/0:18,0:22:27.09:0,27,624	0/0:14,0:19:36.12:0,36,798	0/0:27,0:27:42.14:0,42,1157	0/0:23,0:24:42.14:0,42,1352	0/0:25,0:25:39.06:0,39,1154	1/1:4,18:22:6.02:159,6,0	1/1:15,4:18:9.03:300,9,0	1/1:16,18:34:20.97:302,21,0	1/1:6,0:6:3.01:60,3,0	0/0:19,0:19:24.08:0,24,915	1/1:12,4:16:8.67:276,9,0	0/0:22,1:22:3.01:0,3,53	1/1:13,16:29:21.07:577,21,0	1/1:15,3:18:21.07:578,21,0	1/1:21,18:37:29.83:996,30,0	1/1:1,8:9:3.01:101,3,0
chr10	39764398	.	T	TTA	2191.37	PASS	AB=0.560;AC=11;AF=0.196;AN=56;BaseQRankSum=-7.953;DP=610;FS=2.015;HRun=0;HaplotypeScore=119.5998;InbreedingCoeff=0.1926;MQ=67.80;MQ0=1;MQRankSum=1.462;QD=9.74;ReadPosRankSum=-1.111;VQSLOD=3.0965;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:37:43.69:0,44,209	0/0:1,0:7:15.01:0,15,61	0/0:8,0:7:8.33:0,8,73	0/0:6,0:6:6.96:0,7,88	0/0:2,0:25:49.70:0,50,173	0/0:2,0:23:43.30:0,43,137	0/0:3,0:19:36.32:0,36,132	0/1:9,1:37:77.99:378,0,78	0/0:4,0:19:41.35:0,41,160	0/0:7,0:35:39.93:0,40,232	0/1:4,0:28:6.98:7,0,152	0/0:4,0:22:44.03:0,44,158	0/0:4,0:15:24.08:0,24,144	0/0:6,0:25:56.49:0,56,282	0/0:3,0:21:41.37:0,41,166	0/0:2,0:22:40.62:0,41,144	0/0:2,0:27:26.79:0,27,142	0/0:3,0:14:30.09:0,30,158	0/1:6,0:19:40.72:209,0,41	0/1:5,0:25:32.48:298,0,32	1/1:1,0:13:22.18:183,22,0	0/0:3,0:24:42.89:0,43,158	0/0:4,0:18:40.55:0,41,259	0/0:0,0:16:31.71:0,32,88	0/1:3,0:11:27.78:91,0,28	0/1:4,0:29:17.08:336,0,17	1/1:4,0:32:8.04:486,8,0	0/1:5,0:30:10.26:356,0,10
chr10	39764885	.	AT	A	3679.38	PASS	AB=0.594;AC=15;AF=0.268;AN=56;BaseQRankSum=1.731;DP=671;FS=4.081;HRun=11;HaplotypeScore=83.7946;InbreedingCoeff=0.8922;MQ=74.35;MQ0=0;MQRankSum=0.111;QD=18.58;ReadPosRankSum=0.975;VQSLOD=4.6465;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:40:82.71:0,83,424	0/0:11,0:11:27.05:0,27,280	0/0:21,0:17:13.31:0,13,221	0/0:14,0:13:20.58:0,21,177	0/0:21,0:21:37.90:0,38,491	0/0:1,0:26:65.51:0,66,329	0/0:5,0:30:71.60:0,72,378	1/1:7,23:30:68.87:563,69,0	0/0:3,0:18:37.12:0,37,197	0/0:32,0:33:81.20:0,81,861	0/0:20,0:21:44.25:0,44,499	0/0:20,0:20:45.11:0,45,480	0/0:4,0:25:54.21:0,54,273	0/0:3,0:25:51.41:0,51,259	0/0:35,0:35:96.21:0,96,1003	0/0:16,0:16:39.10:0,39,416	0/0:21,1:23:38.33:0,38,587	0/0:20,0:19:45.11:0,45,479	1/1:5,17:22:50.93:419,51,0	1/1:4,24:28:71.83:583,72,0	0/1:6,13:19:15.38:232,0,15	0/0:29,0:29:72.18:0,72,767	0/0:24,0:24:62.94:0,63,646	0/0:19,1:20:23.46:0,23,446	1/1:4,16:20:44.94:369,45,0	1/1:5,19:24:27.94:436,28,0	1/1:3,30:33:80.88:665,81,0	1/1:2,20:22:7.65:413,8,0
chr10	39765387	.	TGAGA	T	5291.91	PASS	AB=1.000;AC=35;AF=0.625;AN=56;BaseQRankSum=-3.457;DP=696;FS=0.732;HRun=0;HaplotypeScore=148.5154;InbreedingCoeff=0.8178;MQ=71.39;MQ0=10;MQRankSum=1.359;QD=14.19;ReadPosRankSum=3.794;VQSLOD=4.3827;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:54:6.24:0,6,68	1/1:3,2:5:6.02:96,6,0	0/0:39,0:24:5.92:0,6,109	0/0:69,0:31:19.19:0,19,362	1/1:11,9:21:11.88:172,12,0	0/0:24,0:22:15.52:0,16,257	0/0:18,0:27:5.57:0,6,74	1/1:21,5:26:7.80:141,8,0	0/0:27,0:26:12.98:0,13,226	1/1:9,7:16:15:188,15,0	1/1:8,9:17:15.05:239,15,0	0/0:22,0:21:5.80:0,6,71	0/0:12,0:17:16.30:0,16,260	0/0:17,0:15:6.37:0,6,87	1/1:9,14:23:30.10:482,30,0	1/1:7,4:13:30.07:396,30,0	1/1:20,18:37:41.52:673,42,0	1/1:12,16:30:48.14:710,48,0	1/1:9,3:12:5.96:96,6,0	1/1:4,13:19:21.05:294,21,0	1/1:23,12:36:17.95:288,18,0	1/1:10,9:19:14.69:236,15,0	0/0:21,0:21:8.87:0,9,135	0/1:16,0:14:0:0,0,0	1/1:13,7:21:12.51:193,13,0	1/1:10,9:20:20.69:256,21,0	1/1:17,6:29:42.10:556,42,0	1/1:8,4:12:21.04:273,21,0
chr10	39765968	.	A	ACATGGATCTGAGTAGAGG	1871.59	PASS	AB=0.714;AC=21;AF=0.955;AN=22;BaseQRankSum=-1.733;DP=34;FS=6.990;HRun=0;HaplotypeScore=44.9972;InbreedingCoeff=-0.1706;MQ=150.34;MQ0=0;MQRankSum=-0.624;QD=66.84;ReadPosRankSum=-1.456;VQSLOD=1.5483;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,0:1:3.01:92,3,0	./.	1/1:3,0:6:18.06:660,18,0	0/1:3,1:5:8.65:383,0,9	./.	./.	1/1:5,0:5:12.04:217,12,0	1/1:1,0:1:3.01:79,3,0	./.	./.	./.	./.	./.	./.	./.	1/1:2,0:2:3.01:74,3,0	1/1:2,0:2:6.01:98,6,0	./.	1/1:1,0:1:3.01:95,3,0	./.	1/1:2,0:2:6:116,6,0	./.	./.	1/1:2,0:2:6.02:110,6,0	./.	1/1:1,0:1:3:26,3,0	./.	./.
chr10	39766904	.	TTG	T	1367.50	PASS	AB=0.989;AC=29;AF=0.558;AN=52;BaseQRankSum=1.915;DP=510;FS=5.713;HRun=0;HaplotypeScore=130.7050;InbreedingCoeff=0.4801;MQ=53.23;MQ0=5;MQRankSum=-0.411;QD=4.19;ReadPosRankSum=-0.844;VQSLOD=2.3481;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:6.77:0,7,125	0/0:11,0:11:12.06:0,12,57	0/0:14,0:7:3.01:0,3,45	0/0:11,0:8:2.96:0,3,19	0/1:27,0:27:15.91:16,0,170	1/1:20,0:20:20.38:134,20,0	1/1:17,1:18:29.78:223,30,0	1/1:27,0:25:1.54:70,2,0	1/1:21,0:19:32.21:209,32,0	0/0:31,0:31:40.11:0,40,255	0/0:12,0:12:12:0,12,110	1/1:19,1:21:14.31:74,14,0	0/1:22,0:21:18.16:18,0,102	0/1:17,1:18:6.42:6,0,104	0/0:15,0:14:12:0,12,105	0/1:10,0:10:23.39:23,0,131	0/0:22,0:21:27.19:0,27,203	0/0:20,0:20:29.77:0,30,178	1/1:7,0:6:2.98:22,3,0	./.	1/1:15,1:16:11.97:98,12,0	0/1:21,0:21:4.97:5,0,93	./.	1/1:16,1:18:5.78:32,6,0	1/1:18,0:18:14.61:106,15,0	1/1:28,0:27:16.18:185,16,0	1/1:22,0:19:26.80:202,27,0	1/1:11,0:11:14.88:129,15,0
chr10	39766929	.	TGTGTGTGCGCGCGC	T	3711.87	PASS	AB=0.998;AC=27;AF=0.482;AN=56;BaseQRankSum=4.835;DP=480;FS=31.536;HRun=0;HaplotypeScore=219.7744;InbreedingCoeff=-0.4432;MQ=47.78;MQ0=6;MQRankSum=-4.500;QD=8.69;ReadPosRankSum=1.891;VQSLOD=1.4041;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:28:99:150,0,684	0/0:11,0:11:21.04:0,21,356	0/0:3,0:1:3.01:0,3,99	0/0:8,0:6:9.01:0,9,104	0/1:25,0:25:29.20:29,0,642	0/1:16,0:16:71.07:162,0,71	0/1:17,0:17:51.03:51,0,130	0/1:22,0:19:99:345,0,321	0/1:22,0:20:99:261,0,248	0/1:25,0:25:99:218,0,1010	0/1:16,0:16:33.91:34,0,305	1/1:9,5:15:14.08:528,14,0	0/1:26,0:25:83.86:84,0,486	0/1:17,0:17:46.92:47,0,520	0/1:12,0:11:82.71:83,0,262	0/1:11,0:11:27.53:28,0,308	0/1:21,0:20:99:127,0,656	0/1:22,0:21:99:172,0,668	0/1:9,0:6:13.72:225,0,14	0/0:12,1:13:3.01:0,3,50	0/1:24,1:25:99:194,0,113	0/0:18,0:18:22.20:0,22,464	1/1:2,9:11:3.01:67,3,0	1/1:13,5:18:12:274,12,0	1/1:16,0:16:17.60:198,18,0	0/1:23,0:22:99:273,0,282	0/1:21,0:18:99:115,0,187	0/1:8,0:8:48.08:48,0,113
chr10	39766933	.	TGTGCGCGCGC	T	8925.68	PASS	AB=0.967;AC=38;AF=0.704;AN=54;BaseQRankSum=4.179;DP=447;FS=7.133;HRun=0;HaplotypeScore=166.4863;InbreedingCoeff=-0.1571;MQ=46.20;MQ0=6;MQRankSum=-3.170;QD=20.95;ReadPosRankSum=6.721;VQSLOD=2.5429;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:27:99:258,0,122	0/1:11,0:11:12.31:38,0,12	0/0:2,0:1:3.01:0,3,45	0/0:6,0:4:5.97:0,6,62	0/1:25,0:25:99:179,0,169	1/1:8,7:15:24.06:543,24,0	1/1:12,5:17:30.41:511,30,0	1/1:19,0:16:41.95:716,42,0	1/1:16,2:18:41.96:779,42,0	0/1:23,0:23:99:413,0,215	0/1:16,0:16:52.28:226,0,52	1/1:14,0:14:14.94:330,15,0	0/1:23,0:22:20.67:474,0,21	0/1:15,1:17:89.77:183,0,90	0/1:11,0:10:32.36:207,0,32	0/1:6,4:10:31.02:230,0,31	0/1:19,0:18:99:286,0,167	0/1:19,0:18:99:386,0,133	1/1:9,0:6:15.05:317,15,0	./.	1/1:24,0:24:23.66:454,24,0	0/1:16,0:16:28.10:28,0,88	1/1:11,0:11:3.01:67,3,0	1/1:17,0:17:11.93:186,12,0	1/1:1,14:15:18.06:555,18,0	1/1:4,17:20:19.66:740,20,0	1/1:16,4:18:25.59:544,26,0	1/1:6,0:6:14.90:272,15,0
chr10	39766935	.	TGCGCGCGC	T	8982.50	PASS	AB=0.820;AC=50;AF=0.926;AN=54;BaseQRankSum=-0.035;DP=428;FS=9.284;HRun=0;HaplotypeScore=151.4892;InbreedingCoeff=0.3619;MQ=48.91;MQ0=6;MQRankSum=-1.039;QD=21.91;ReadPosRankSum=3.466;VQSLOD=3.8643;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:19,7:25:18.49:367,18,0	1/1:2,4:11:9.13:173,9,0	0/1:2,0:1:0:0,0,0	0/0:6,0:5:3.01:0,3,43	1/1:16,8:24:15:252,15,0	1/1:14,0:15:20.39:364,20,0	1/1:12,4:16:13.45:234,13,0	1/1:10,6:14:32.57:574,33,0	1/1:16,3:17:24.08:521,24,0	1/1:14,5:22:1.59:649,2,0	1/1:10,1:15:15.05:352,15,0	1/1:13,1:14:12.04:258,12,0	1/1:9,10:20:39.39:880,39,0	1/1:10,5:16:13.86:307,14,0	1/1:9,2:10:15.05:339,15,0	1/1:8,2:10:18.06:365,18,0	1/1:13,4:16:27.03:540,27,0	1/1:10,3:17:11.88:560,12,0	1/1:7,1:5:15.05:303,15,0	./.	1/1:18,5:24:14.67:347,15,0	0/1:7,8:16:0.03:66,0,0	1/1:11,0:11:3.01:67,3,0	1/1:13,4:17:8.99:154,9,0	1/1:15,0:15:18.06:399,18,0	1/1:20,0:19:15.94:487,16,0	1/1:16,3:16:16.90:294,17,0	1/1:6,0:6:8.52:132,9,0
chr10	39767009	.	T	TGG	10016.62	PASS	AB=0.985;AC=43;AF=0.768;AN=56;BaseQRankSum=-0.087;DP=812;FS=10.907;HRun=2;HaplotypeScore=187.9437;InbreedingCoeff=0.0919;MQ=46.97;MQ0=25;MQRankSum=1.841;QD=14.97;ReadPosRankSum=7.140;VQSLOD=0.9793;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:33,1:33:2.09:476,0,2	1/1:10,0:10:12.88:219,13,0	0/0:73,0:10:6.96:0,7,75	0/0:66,0:11:25.17:0,25,302	1/1:21,0:21:32.77:292,33,0	1/1:23,0:23:8.97:393,9,0	0/1:28,0:28:21.91:438,0,22	0/1:26,0:21:99:179,0,106	1/1:27,0:27:42.02:504,42,0	1/1:24,0:24:6.56:404,7,0	1/1:18,0:17:32.90:272,33,0	1/1:24,0:24:55.68:502,56,0	0/1:22,1:22:65.25:325,0,65	0/1:32,0:32:9.30:605,0,9	0/1:20,0:20:24.03:290,0,24	1/1:21,0:21:53.76:438,54,0	1/1:31,1:31:37.87:563,38,0	1/1:30,2:32:34.60:658,35,0	0/1:13,1:9:28.89:138,0,29	1/1:13,1:14:22.10:165,22,0	0/1:113,0:109:29:1038,0,29	1/1:24,0:23:44.77:395,45,0	1/1:16,0:16:32.99:294,33,0	1/1:31,1:31:32.98:299,33,0	1/1:21,0:21:47.72:378,48,0	1/1:16,0:16:18.25:281,18,0	1/1:14,0:14:41.25:354,41,0	0/1:7,0:7:4.96:117,0,5
chr10	39767010	.	G	GGT	20670.89	PASS	AB=0.987;AC=53;AF=0.946;AN=56;BaseQRankSum=-3.889;DP=822;FS=7.664;HRun=0;HaplotypeScore=155.3627;InbreedingCoeff=0.7557;MQ=46.86;MQ0=25;MQRankSum=4.212;QD=27.49;ReadPosRankSum=3.230;VQSLOD=6.2687;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:12,22:33:67.44:1038,67,0	1/1:3,6:10:27.09:429,27,0	0/1:73,0:10:2.98:3,0,55	0/0:70,0:11:21.79:0,22,217	1/1:2,19:21:33:552,33,0	1/1:9,15:24:21.63:896,22,0	1/1:9,20:29:60.20:988,60,0	1/1:23,6:22:13.84:486,14,0	1/1:7,20:27:63.21:978,63,0	1/1:8,17:25:60.20:978,60,0	1/1:2,15:17:32.99:537,33,0	1/1:9,15:24:66.17:1003,66,0	1/1:9,13:22:37.19:681,37,0	1/1:7,25:32:41.31:1166,41,0	1/1:7,13:20:42.14:687,42,0	1/1:7,14:21:57.15:885,57,0	1/1:13,18:31:66.17:1030,66,0	1/1:10,22:33:48.49:1229,48,0	1/1:8,4:8:15.05:240,15,0	1/1:6,8:14:21.07:318,21,0	1/1:57,60:113:99:2370,119,0	1/1:6,17:23:44.97:729,45,0	1/1:4,12:16:33.10:547,33,0	1/1:17,18:33:38.51:575,39,0	1/1:4,17:21:49.40:754,49,0	1/1:5,11:16:45.14:688,45,0	1/1:0,14:14:42.09:641,42,0	1/1:4,3:7:15.05:245,15,0
chr10	39767060	.	G	GGT	18415.02	PASS	AB=0.653;AC=48;AF=0.857;AN=56;BaseQRankSum=-3.579;DP=827;FS=2.211;HRun=0;HaplotypeScore=141.3916;InbreedingCoeff=0.2572;MQ=51.55;MQ0=46;MQRankSum=0.921;QD=25.37;ReadPosRankSum=1.409;VQSLOD=5.5281;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:10,31:41:25.98:1161,0,26	1/1:6,4:9:21.04:311,21,0	0/0:57,0:4:3.01:0,3,34	0/0:44,0:6:1.25:0,1,96	1/1:6,5:9:18.06:286,18,0	1/1:8,17:27:44.53:696,45,0	1/1:9,26:37:68.88:1122,69,0	0/1:22,13:32:9.87:829,0,10	1/1:9,16:25:15.81:714,16,0	1/1:9,17:22:51.17:841,51,0	1/1:7,5:12:22.12:273,22,0	1/1:8,17:24:49.41:790,49,0	1/1:2,20:22:51.17:827,51,0	1/1:19,12:30:34.99:803,35,0	1/1:4,12:16:24.08:389,24,0	1/1:8,8:15:34.67:545,35,0	1/1:13,20:33:48.16:787,48,0	1/1:17,11:28:47.30:665,47,0	1/1:15,8:16:30.06:443,30,0	1/1:8,10:17:36.12:556,36,0	1/1:35,100:137:99:2483,124,0	1/1:9,7:13:23.97:367,24,0	0/1:5,3:7:32.18:44,0,32	1/1:13,32:44:67.10:1078,67,0	0/1:5,11:17:7.56:436,0,8	1/1:15,10:23:48.63:754,49,0	1/1:1,19:20:45.15:733,45,0	1/1:3,11:14:30.10:481,30,0
chr10	39767532	.	AAGAC	A	5228.67	PASS	AB=1.000;AC=34;AF=0.607;AN=56;BaseQRankSum=-3.447;DP=450;FS=5.095;HRun=0;HaplotypeScore=109.8642;InbreedingCoeff=0.8615;MQ=65.77;MQ0=0;MQRankSum=-2.307;QD=17.66;ReadPosRankSum=-0.704;VQSLOD=4.1233;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:13.34:0,13,225	1/1:8,0:8:16.99:143,17,0	0/0:16,0:11:30.06:0,30,450	0/1:14,0:9:4.20:4,0,219	1/1:30,0:30:57.11:582,57,0	0/0:16,0:16:34.89:0,35,397	0/0:18,0:18:33.81:0,34,431	1/1:14,1:15:41.10:429,41,0	0/0:10,0:10:13.28:0,13,144	1/1:22,0:22:54.68:553,55,0	1/1:10,0:10:18.17:110,18,0	0/0:21,0:21:30.88:0,31,342	0/0:17,0:16:14.45:0,14,169	0/0:9,0:8:10.09:0,10,179	1/1:15,2:17:20.97:250,21,0	1/1:17,0:16:30.05:289,30,0	1/1:24,1:25:44.94:429,45,0	1/1:14,0:14:19.39:119,19,0	1/1:14,0:13:34.87:321,35,0	1/1:32,0:32:74.76:633,75,0	1/1:7,0:7:14.93:119,15,0	1/1:12,1:13:23.99:253,24,0	0/0:16,0:15:21.42:0,21,244	0/0:15,0:14:28.88:0,29,345	1/1:15,0:15:30.72:193,31,0	1/1:15,0:15:40.25:341,40,0	1/1:17,0:17:22.92:333,23,0	0/1:11,0:11:6.12:128,0,6
chr10	39767533	.	AGAC	A	8565.57	PASS	AB=0.978;AC=37;AF=0.661;AN=56;BaseQRankSum=-7.778;DP=420;FS=0.000;HRun=0;HaplotypeScore=87.1422;InbreedingCoeff=0.7481;MQ=67.25;MQ0=0;MQRankSum=-2.820;QD=28.08;ReadPosRankSum=-2.025;VQSLOD=4.0672;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:13,0:13:11.37:11,0,110	1/1:0,1:8:18.02:226,18,0	0/0:14,1:11:29.99:0,30,414	0/1:13,0:9:18.86:19,0,213	1/1:0,27:27:57.19:976,57,0	0/0:14,0:14:33.71:0,34,234	0/0:17,0:17:23.64:0,24,253	1/1:7,0:14:41.86:524,42,0	0/0:7,0:8:3.99:0,4,74	1/1:10,2:21:62.41:840,62,0	1/1:4,0:11:22.82:219,23,0	0/0:21,0:21:25.05:0,25,218	0/0:13,0:13:9.32:0,9,98	0/1:9,0:8:4.94:5,0,111	1/1:2,14:16:20.77:343,21,0	1/1:0,14:14:30.10:552,30,0	1/1:2,16:21:43.95:696,44,0	1/1:0,0:14:20.92:212,21,0	1/1:1,7:13:38.82:494,39,0	1/1:0,14:30:75.24:1017,75,0	1/1:0,0:7:15.05:190,15,0	1/1:1,8:11:24.08:367,24,0	0/0:13,0:13:20.44:0,20,135	0/0:13,0:13:28.25:0,28,210	1/1:2,2:15:35.96:394,36,0	1/1:7,2:17:48.04:617,48,0	1/1:7,3:17:39.46:582,39,0	1/1:5,1:10:25.42:283,25,0
chr10	39767535	.	AC	A	4322.23	PASS	AB=1.000;AC=37;AF=0.661;AN=56;BaseQRankSum=-0.462;DP=424;FS=0.450;HRun=1;HaplotypeScore=90.6722;InbreedingCoeff=0.7614;MQ=68.33;MQ0=0;MQRankSum=-2.416;QD=14.12;ReadPosRankSum=0.194;VQSLOD=3.9430;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:13,0:13:8.12:8,0,84	1/1:5,3:8:17.83:140,18,0	0/0:13,1:11:18.88:0,19,273	0/0:13,0:10:9.76:0,10,231	1/1:27,0:27:55.34:324,55,0	0/0:15,0:15:21:0,21,203	0/0:17,0:17:45.86:0,46,253	1/1:8,7:15:43.04:287,43,0	0/1:9,0:9:41.95:42,0,48	1/1:12,9:21:60.73:447,61,0	1/1:0,13:13:26.72:183,27,0	0/0:21,0:21:28.24:0,28,171	0/0:14,0:14:9.91:0,10,105	0/0:9,0:8:18.15:0,18,119	1/1:16,0:16:19.82:106,20,0	1/1:14,1:14:29.24:170,29,0	1/1:17,3:20:40.77:244,41,0	1/1:9,5:14:20.96:198,21,0	1/1:11,3:13:35.20:260,35,0	1/1:14,16:30:74.36:534,74,0	1/1:2,5:7:14.93:114,15,0	1/1:9,2:11:23.21:141,23,0	0/0:15,0:14:27.18:0,27,144	0/1:14,0:14:7.02:7,0,138	1/1:12,4:15:30.23:272,30,0	1/1:10,7:17:44.53:330,45,0	1/1:12,4:16:41.62:329,42,0	1/1:6,4:10:23.88:185,24,0
chr10	39767676	.	T	TTG	2147.07	PASS	AB=0.947;AC=43;AF=0.860;AN=50;BaseQRankSum=0.152;DP=499;FS=1.719;HRun=0;HaplotypeScore=144.2023;InbreedingCoeff=0.0953;MQ=60.78;MQ0=3;MQRankSum=-1.880;QD=5.12;ReadPosRankSum=0.312;VQSLOD=2.9910;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	1/1:5,0:7:3:26,3,0	0/0:28,0:18:2.94:0,3,18	0/1:29,0:20:3.74:4,0,37	1/1:11,2:24:0.30:109,0,0	1/1:24,0:24:8.82:59,9,0	1/1:21,0:21:11.93:98,12,0	1/1:29,0:29:18.38:154,18,0	1/1:6,0:9:3:26,3,0	1/1:11,0:11:20.79:191,21,0	1/1:20,0:22:9:77,9,0	1/1:14,2:15:9:112,9,0	1/1:15,0:15:2.95:29,3,0	1/1:15,0:15:5.96:69,6,0	1/1:10,0:11:3:26,3,0	./.	0/1:19,0:21:2.75:68,0,3	1/1:7,0:8:3:26,3,0	1/1:21,0:21:12.88:132,13,0	0/1:12,0:12:0.21:37,0,0	./.	1/1:15,0:16:5.60:26,6,0	0/1:18,5:23:9.05:39,0,9	1/1:22,16:38:54.12:726,54,0	1/1:16,2:22:3:26,3,0	1/1:13,0:15:17.90:149,18,0	1/1:9,0:9:5.94:44,6,0	0/1:1,0:1:0:0,0,0
chr10	39767703	.	TGCGCGC	T	1983.26	PASS	AB=0.930;AC=26;AF=0.464;AN=56;BaseQRankSum=-5.243;DP=366;FS=4.563;HRun=0;HaplotypeScore=130.5105;InbreedingCoeff=-0.1693;MQ=46.90;MQ0=4;MQRankSum=2.006;QD=7.93;ReadPosRankSum=-5.961;VQSLOD=0.0899;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:7,2:10:6.02:91,6,0	0/0:5,0:5:2.99:0,3,24	0/0:8,0:2:2.98:0,3,21	0/1:15,0:9:17.02:17,0,22	0/0:18,1:19:4.39:0,4,66	0/0:16,1:17:4.24:0,4,30	0/1:21,0:21:11.52:246,0,12	0/1:22,3:25:92.70:296,0,93	0/1:4,0:4:16.31:67,0,16	0/1:8,1:9:62.58:63,0,74	0/1:20,1:21:0.71:1,0,22	0/0:12,1:12:1.63:0,2,36	1/1:7,2:10:11.82:116,12,0	0/0:12,0:12:1.82:0,2,6	0/1:6,1:7:18.29:20,0,18	1/1:11,1:11:2.98:22,3,0	0/1:11,1:12:48.91:147,0,49	0/1:5,0:5:15.37:58,0,15	0/1:10,4:14:33.27:298,0,33	1/1:7,3:11:5.75:62,6,0	1/1:15,0:14:12.02:244,12,0	1/1:15,0:15:2.51:7,3,0	0/1:18,1:20:30.05:115,0,30	0/0:28,0:28:29.69:0,30,170	0/0:13,1:14:0.47:0,0,1	0/1:11,3:15:59.42:182,0,59	0/1:5,0:5:13.97:14,0,26	0/1:4,0:4:1.16:70,0,1
chr10	39772631	.	CAAAG	C	10425.75	PASS	AB=1.000;AC=35;AF=0.625;AN=56;BaseQRankSum=6.931;DP=772;FS=4.649;HRun=0;HaplotypeScore=164.6748;InbreedingCoeff=-0.3114;MQ=69.24;MQ0=2;MQRankSum=4.938;QD=14.24;ReadPosRankSum=4.155;VQSLOD=4.1801;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:37,0:37:86.96:407,0,87	1/1:14,0:14:7.70:229,8,0	0/0:24,0:23:21.87:0,22,394	0/0:15,0:15:20.80:0,21,271	0/1:23,0:23:99:193,0,111	0/1:20,0:20:27.01:279,0,27	0/1:30,0:30:31:266,0,31	1/1:7,22:29:65.78:675,66,0	0/1:38,0:37:73.98:410,0,74	0/1:37,0:37:28.10:465,0,28	0/1:22,0:22:99:193,0,162	0/1:27,0:27:37.98:38,0,252	0/1:21,0:21:53.98:240,0,54	0/1:43,0:43:99:375,0,212	0/1:41,0:41:23.02:633,0,23	0/1:35,0:35:56:383,0,56	0/1:28,0:28:64.41:318,0,64	0/1:25,0:25:30.22:249,0,30	1/1:4,8:11:24.01:302,24,0	1/1:9,21:30:59.61:802,60,0	1/1:9,30:39:63.22:1069,63,0	0/1:25,0:25:69.21:284,0,69	0/1:24,0:24:50.45:50,0,187	0/1:25,0:25:15.09:15,0,225	1/1:8,17:25:27.09:458,27,0	1/1:10,31:41:95.69:1279,96,0	1/1:8,18:26:41.97:712,42,0	1/1:5,10:15:6.02:102,6,0
chr10	39772643	.	G	GAAACAAAC	3400.17	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=-5.625;DP=772;FS=3.705;HRun=0;HaplotypeScore=239.3214;InbreedingCoeff=0.7684;MQ=62.40;MQ0=2;MQRankSum=-4.924;QD=27.20;ReadPosRankSum=-1.549;VQSLOD=3.0750;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:78.19:0,78,1752	0/0:14,0:14:39.12:0,39,888	0/0:16,0:14:24.93:0,25,572	0/0:18,0:16:29.76:0,30,589	0/0:20,0:20:48.11:0,48,922	0/0:18,0:18:48.15:0,48,1105	0/0:24,0:24:45.08:0,45,926	0/0:38,0:38:25.01:0,25,593	0/0:35,0:34:75.20:0,75,1625	0/0:34,0:34:96.29:0,96,2065	0/0:25,0:25:65.69:0,66,1012	1/1:5,19:31:27.07:1106,27,0	0/0:24,0:24:45.13:0,45,993	0/0:37,0:37:42:0,42,1759	0/0:41,0:41:99:0,102,2389	0/0:37,0:37:69.18:0,69,1522	0/0:32,0:32:66.18:0,66,1365	0/0:28,0:28:43.01:0,43,825	0/0:16,0:15:0.45:0,0,284	0/0:26,0:26:20.40:0,20,720	0/0:39,0:39:84.24:0,84,1415	0/0:28,0:28:72.14:0,72,1328	1/1:6,16:24:24.06:988,24,0	1/1:7,19:31:38.94:1286,39,0	0/0:21,0:21:36.05:0,36,581	0/1:39,0:39:20:20,0,1052	0/0:24,0:24:53.74:0,54,938	0/0:14,0:14:18.06:0,18,306
chr10	39772647	.	GAAAC	G	13903.98	PASS	AB=1.000;AC=38;AF=0.679;AN=56;BaseQRankSum=5.936;DP=771;FS=1.285;HRun=0;HaplotypeScore=146.1072;InbreedingCoeff=0.3386;MQ=61.62;MQ0=2;MQRankSum=5.776;QD=21.20;ReadPosRankSum=10.883;VQSLOD=3.0686;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,29:36:57.19:948,57,0	1/1:1,14:15:35.82:532,36,0	0/0:18,0:13:12.03:0,12,224	0/0:19,0:17:26.95:0,27,312	1/1:7,13:20:35.92:503,36,0	1/1:3,16:19:39.13:649,39,0	1/1:3,19:22:36.12:599,36,0	0/1:40,0:40:99:124,0,332	1/1:6,30:36:57.19:949,57,0	1/1:3,31:34:92.82:1358,93,0	1/1:9,16:25:44.67:553,45,0	0/0:27,0:27:33.04:0,33,488	1/1:4,21:25:33.11:549,33,0	1/1:13,23:36:32.19:853,32,0	1/1:5,37:42:87.30:1448,87,0	1/1:5,30:35:54.18:900,54,0	1/1:7,26:33:33.11:749,33,0	1/1:6,21:27:33.54:564,34,0	0/1:19,0:18:60.76:61,0,176	0/1:27,0:27:98.92:318,0,99	0/1:42,0:42:99:462,0,182	1/1:5,23:28:65.45:775,65,0	0/0:23,0:23:29.64:0,30,397	0/0:28,0:28:34.90:0,35,466	0/1:20,0:20:30.97:197,0,31	0/1:39,0:39:90.66:447,0,91	0/1:22,0:22:36.10:331,0,36	0/1:14,0:14:34.87:35,0,75
chr10	39773371	.	TA	T	6517.51	PASS	AB=0.760;AC=40;AF=0.714;AN=56;BaseQRankSum=6.877;DP=525;FS=2.038;HRun=11;HaplotypeScore=62.2633;InbreedingCoeff=0.7760;MQ=57.54;MQ0=24;MQRankSum=0.414;QD=15.41;ReadPosRankSum=1.799;VQSLOD=5.6284;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,21:26:35.87:289,36,0	1/1:1,5:7:17.02:129,17,0	0/0:10,0:7:3.58:0,4,128	0/1:6,1:2:6.74:7,0,18	1/1:4,23:27:71.91:590,72,0	0/0:25,0:23:60.08:0,60,610	0/0:12,0:10:30.06:0,30,311	1/1:12,23:29:68.74:549,69,0	0/0:18,0:17:48.12:0,48,512	1/1:8,26:31:71.88:589,72,0	1/1:9,22:29:42.85:461,43,0	0/0:13,1:14:11.46:0,11,327	1/1:5,14:20:41.75:336,42,0	1/1:4,13:17:29.96:246,30,0	1/1:10,15:24:27.82:384,28,0	1/1:1,16:16:35.96:295,36,0	1/1:4,19:21:46.77:381,47,0	1/1:2,12:12:29.97:246,30,0	1/1:5,14:19:9.97:286,10,0	1/1:2,19:21:47.64:378,48,0	1/1:4,3:3:5.99:49,6,0	1/1:1,4:5:11.99:98,12,0	0/0:14,0:13:30.06:0,30,307	0/0:9,0:7:21.04:0,21,216	1/1:9,11:17:29.94:246,30,0	1/1:6,18:24:24.87:403,25,0	1/1:3,16:20:40.97:326,41,0	0/1:9,11:16:27.99:229,0,28
chr10	39773886	.	T	TA	2721.20	PASS	AB=0.733;AC=26;AF=0.481;AN=54;BaseQRankSum=10.168;DP=316;FS=5.317;HRun=1;HaplotypeScore=67.7875;InbreedingCoeff=0.4559;MQ=66.02;MQ0=0;MQRankSum=-3.455;QD=13.67;ReadPosRankSum=3.344;VQSLOD=2.9893;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:52.46:0,52,300	./.	0/0:10,0:9:27.05:0,27,322	0/0:12,0:10:20.91:0,21,201	1/1:4,10:15:26.20:239,26,0	0/0:22,0:22:35.74:0,36,218	0/1:9,0:9:2.14:2,0,56	0/1:17,16:33:7.01:418,0,7	0/0:6,0:6:13.13:0,13,55	1/1:4,8:12:9.94:195,10,0	1/1:2,4:6:7.05:106,7,0	0/0:11,0:11:27.08:0,27,363	0/0:7,0:7:16.22:0,16,72	0/0:8,0:8:21.68:0,22,92	0/1:6,3:9:11.36:81,0,11	0/1:5,1:6:4.15:85,0,4	1/1:13,14:27:9.10:392,9,0	1/1:4,8:12:7.96:183,8,0	0/1:8,12:20:12.85:327,0,13	1/1:1,2:3:9.01:90,9,0	0/1:4,3:7:4.93:86,0,5	0/1:1,1:2:5.07:21,0,5	0/0:3,0:3:9.03:0,9,122	0/0:9,0:9:27.07:0,27,338	1/1:3,5:8:12.88:164,13,0	0/1:3,7:10:4.19:146,0,4	1/1:1,8:9:14.86:174,15,0	1/1:2,9:11:7.82:200,8,0
chr10	39773887	.	T	TA	2490.33	PASS	AB=0.758;AC=27;AF=0.500;AN=54;BaseQRankSum=10.528;DP=320;FS=0.000;HRun=0;HaplotypeScore=67.9857;InbreedingCoeff=0.3311;MQ=66.04;MQ0=0;MQRankSum=-4.249;QD=12.03;ReadPosRankSum=2.879;VQSLOD=4.1992;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:24.97:0,25,314	./.	0/0:11,0:10:27.06:0,27,335	0/0:13,0:11:24.01:0,24,263	1/1:4,10:14:26.44:256,26,0	0/0:22,0:22:62.62:0,63,318	0/1:9,0:9:1.01:1,0,75	0/1:18,16:34:16.30:383,0,16	0/0:7,0:7:17.08:0,17,85	1/1:4,8:12:11.20:198,11,0	1/1:2,4:6:3.95:102,4,0	0/0:11,0:11:33.08:0,33,414	0/1:8,0:8:2.73:3,0,71	0/0:8,0:8:20.41:0,20,101	0/1:6,3:9:14.81:102,0,15	0/1:4,1:5:25.84:38,0,26	1/1:13,14:27:13.94:360,14,0	1/1:4,8:12:5.81:180,6,0	0/1:9,12:21:23.82:297,0,24	1/1:1,2:3:8.87:67,9,0	0/1:3,3:6:26.77:40,0,27	0/1:1,1:2:6.82:20,0,7	0/0:3,0:3:9.03:0,9,126	0/0:9,0:9:27.07:0,27,345	1/1:3,5:8:5.47:113,5,0	0/1:3,7:10:0.80:146,0,1	1/1:2,8:10:12.54:171,13,0	1/1:2,9:11:2.68:193,3,0
chr10	39774425	.	CATACATA	C	148.93	PASS	AB=0.926;AC=12;AF=0.214;AN=56;BaseQRankSum=-1.836;DP=689;FS=13.715;HRun=0;HaplotypeScore=355.2798;InbreedingCoeff=-0.2600;MQ=50.81;MQ0=7;MQRankSum=0.525;QD=0.55;ReadPosRankSum=-7.209;VQSLOD=0.1914;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:23,8:31:55.15:0,55,357	0/1:10,0:10:13.04:13,0,323	0/0:10,0:6:18.05:0,18,221	0/0:12,0:9:27.09:0,27,342	0/0:21,0:21:9.24:0,9,718	0/0:17,0:26:33.46:0,33,314	0/0:19,0:22:27.05:0,27,268	0/0:41,0:38:98.01:0,98,655	0/1:9,0:17:9.39:9,0,204	0/1:28,0:28:14.58:15,0,920	0/0:23,0:23:31.27:0,31,716	0/0:40,0:40:92.07:0,92,1301	0/1:15,9:24:42.64:43,0,236	0/1:8,6:14:26.25:26,0,104	0/1:26,0:26:75.95:76,0,791	0/1:32,0:32:2.51:3,0,834	0/0:32,0:32:33.87:0,34,1141	0/1:23,0:23:39:39,0,910	0/0:23,0:21:15.24:0,15,443	0/1:23,0:22:25.33:25,0,523	0/0:51,0:51:34.18:0,34,1186	0/0:19,0:18:13.80:0,14,530	0/0:25,0:25:50.24:0,50,765	0/0:19,0:19:41.11:0,41,434	0/1:21,0:21:14.80:15,0,517	0/1:28,0:28:18.01:18,0,773	0/1:26,0:26:13.16:13,0,889	0/0:22,0:21:26.98:0,27,857
chr10	39774523	.	TATAC	T	2123.21	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=6.339;DP=892;FS=7.587;HRun=0;HaplotypeScore=186.2396;InbreedingCoeff=0.9988;MQ=60.01;MQ0=7;MQRankSum=0.282;QD=24.13;ReadPosRankSum=4.652;VQSLOD=2.5478;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:47.82:0,48,1206	0/0:14,0:14:39.13:0,39,959	0/0:29,0:18:36.10:0,36,778	0/0:37,0:22:37.41:0,37,768	0/0:42,0:42:99:0,105,2636	0/0:29,0:29:78.25:0,78,1899	0/0:21,0:21:48.16:0,48,1204	0/0:48,0:48:99:0,99,2257	0/0:32,0:32:72.25:0,72,1781	0/0:41,1:42:61.24:0,61,2640	0/0:25,0:25:60.21:0,60,1495	1/1:6,26:32:42.02:721,42,0	0/0:31,0:31:72.25:0,72,1778	0/0:30,0:30:69.24:0,69,1696	0/0:43,0:43:99:0,113,2690	0/0:38,0:38:99:0,99,2437	0/0:26,0:26:63.62:0,64,1437	0/0:20,0:20:57.57:0,58,1302	0/0:24,0:23:30.05:0,30,1305	0/0:33,0:33:90.30:0,90,2195	0/0:57,0:57:99:0,144,3458	0/0:29,0:29:75.21:0,75,1778	1/1:8,32:40:65.85:1133,66,0	1/1:1,15:16:24.08:412,24,0	0/0:23,0:23:63.22:0,63,1553	0/0:45,0:45:99:0,117,2906	0/0:32,1:33:29.77:0,30,1876	0/0:25,0:25:72.22:0,72,1702
chr10	39775772	.	AT	A	6215.21	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-9.448;DP=461;FS=0.883;HRun=9;HaplotypeScore=70.5488;InbreedingCoeff=0.9444;MQ=69.38;MQ0=2;MQRankSum=1.550;QD=20.24;ReadPosRankSum=1.842;VQSLOD=5.4620;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:38:94.38:0,94,521	1/1:2,7:9:21.01:192,21,0	0/0:11,0:9:11.98:0,12,113	0/0:15,0:13:12.03:0,12,127	1/1:6,19:25:51.01:466,51,0	0/0:4,0:22:54.16:0,54,285	0/0:5,0:10:19.67:0,20,101	1/1:8,19:27:40.20:494,40,0	0/0:1,0:8:19.92:0,20,101	1/1:3,20:23:51.28:506,51,0	1/1:3,19:22:57.03:522,57,0	0/0:9,0:9:24.07:0,24,273	0/0:2,0:11:25.73:0,26,143	0/0:3,0:15:31.28:0,31,159	1/1:2,5:7:12:110,12,0	1/1:1,7:8:18:165,18,0	1/1:7,23:30:60.02:549,60,0	1/1:4,17:21:46.93:437,47,0	1/1:6,9:15:27:247,27,0	1/1:6,18:24:53.06:473,53,0	1/1:1,6:6:12.01:110,12,0	1/1:0,3:3:3:27,3,0	0/0:8,0:8:20.89:0,21,222	0/0:5,0:5:9.03:0,9,104	1/1:2,21:23:57.03:522,57,0	1/1:8,16:24:51.01:463,51,0	1/1:3,24:27:72.04:659,72,0	1/1:2,10:12:30.02:275,30,0
chr10	39776253	.	GC	G	2211.03	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=12.656;DP=567;FS=4.548;HRun=3;HaplotypeScore=71.2879;InbreedingCoeff=0.9952;MQ=73.47;MQ0=1;MQRankSum=0.226;QD=29.88;ReadPosRankSum=2.185;VQSLOD=3.3591;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:96.32:0,96,1374	0/0:11,0:11:33.10:0,33,457	0/0:12,0:12:16.54:0,17,255	0/0:14,0:14:29.79:0,30,351	0/0:15,0:15:45.11:0,45,623	0/0:11,0:11:27.01:0,27,361	0/0:19,0:19:51.15:0,51,699	0/0:17,0:17:45.14:0,45,632	0/0:21,0:21:63.21:0,63,905	0/0:24,0:24:69.17:0,69,939	0/0:12,0:12:33.11:0,33,475	1/1:0,20:20:57.13:688,57,0	0/0:21,0:21:60.17:0,60,826	0/0:19,0:19:50.84:0,51,698	0/0:20,0:20:60.17:0,60,826	0/0:17,0:17:48.16:0,48,687	0/0:34,0:34:99:0,102,1427	0/0:28,0:28:81.10:0,81,1091	0/0:24,0:24:69.05:0,69,917	0/0:15,0:15:45.14:0,45,625	0/0:37,0:36:99:0,102,1360	0/0:21,0:21:57.16:0,57,798	1/1:2,19:21:60.19:738,60,0	1/1:0,33:33:74.90:929,75,0	0/0:19,0:19:57.19:0,57,820	0/0:19,0:19:57.17:0,57,787	0/0:18,0:18:48.15:0,48,669	0/0:13,0:13:39.13:0,39,561
chr10	39777428	.	AGAAT	A	1838.31	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-2.804;DP=814;FS=6.038;HRun=0;HaplotypeScore=218.4954;InbreedingCoeff=0.9724;MQ=58.27;MQ0=1;MQRankSum=7.222;QD=25.89;ReadPosRankSum=4.519;VQSLOD=2.9561;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:31:21.06:0,21,319	0/0:7,0:17:36.03:0,36,512	0/0:16,0:14:15.05:0,15,260	0/0:17,0:17:18.06:0,18,428	0/0:8,0:33:69.38:0,69,848	0/0:14,0:38:42.01:0,42,593	0/0:12,0:15:20.94:0,21,225	0/0:33,0:42:76.06:0,76,1396	0/0:11,0:32:54.06:0,54,833	0/0:18,0:36:91.67:0,92,1507	0/0:9,0:26:49.02:0,49,660	1/1:4,21:25:51.17:842,51,0	0/0:20,0:40:69.08:0,69,1039	0/0:13,0:40:80.21:0,80,1294	0/0:21,0:59:93.14:0,93,1445	0/0:18,0:31:63.05:0,63,867	0/0:7,0:13:17.97:0,18,229	0/0:6,0:15:15.01:0,15,251	0/0:17,0:35:63.49:0,63,776	0/0:9,0:25:47.99:0,48,645	0/0:15,0:20:23.93:0,24,270	0/0:12,0:35:71.35:0,71,906	1/1:8,17:24:32.99:545,33,0	1/1:6,15:21:36.12:594,36,0	0/0:9,0:20:21.03:0,21,326	0/0:19,0:47:92.14:0,92,1335	0/0:25,0:50:78.06:0,78,1235	0/0:2,0:7:15.05:0,15,243
chr10	39777882	.	A	ATTT	6840.16	PASS	AB=0.603;AC=47;AF=0.839;AN=56;BaseQRankSum=-0.423;DP=504;FS=0.000;HRun=12;HaplotypeScore=93.7026;InbreedingCoeff=0.2576;MQ=76.34;MQ0=1;MQRankSum=-2.996;QD=14.25;ReadPosRankSum=1.824;VQSLOD=3.1370;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,0:21:24.06:308,24,0	1/1:3,1:5:7.58:102,8,0	0/0:11,0:12:10.31:0,10,70	0/0:11,0:11:5.25:0,5,65	1/1:7,17:27:49.52:675,50,0	1/1:1,12:18:43.61:633,44,0	1/1:3,4:8:12.04:203,12,0	0/1:11,0:21:12.49:12,0,41	1/1:1,8:10:9.03:165,9,0	1/1:10,14:29:58.34:842,58,0	1/1:3,16:23:59.76:791,60,0	0/1:4,0:17:10.86:11,0,19	1/1:12,0:19:18.89:228,19,0	1/1:9,0:17:24.08:338,24,0	1/1:1,4:13:18.02:266,18,0	1/1:4,15:20:33.09:573,33,0	1/1:5,16:21:30.10:535,30,0	1/1:6,6:13:18.04:286,18,0	1/1:6,1:19:25.68:161,26,0	1/1:7,0:23:18.03:67,18,0	1/1:7,0:18:8.72:20,9,0	1/1:8,8:18:23.97:340,24,0	1/1:4,0:14:9.33:21,9,0	1/1:6,0:25:24.18:72,24,0	0/1:4,0:17:27.59:28,0,75	0/1:7,0:16:45.24:63,0,45	0/1:7,0:30:33.63:76,0,34	1/1:6,0:16:9.97:22,10,0
chr10	39780810	.	G	GT	13111.48	PASS	AB=0.792;AC=46;AF=0.821;AN=56;BaseQRankSum=-12.251;DP=607;FS=0.985;HRun=9;HaplotypeScore=58.5337;InbreedingCoeff=0.7368;MQ=75.57;MQ0=0;MQRankSum=-3.339;QD=24.37;ReadPosRankSum=-0.183;VQSLOD=5.4445;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:48.46:0,48,416	1/1:0,7:7:21.06:232,21,0	0/0:12,0:12:17.87:0,18,145	0/1:12,0:14:19.74:20,0,130	1/1:4,25:29:69.19:763,69,0	1/1:5,27:32:58:846,58,0	1/1:4,18:22:25.08:505,25,0	1/1:10,24:36:77.65:769,78,0	1/1:1,18:19:48.13:531,48,0	1/1:4,23:27:33:661,33,0	1/1:2,12:14:33.09:365,33,0	1/1:5,19:24:48.13:531,48,0	0/0:20,0:20:50.98:0,51,442	0/0:18,0:18:35.23:0,35,401	1/1:2,19:21:54.15:597,54,0	1/1:0,25:25:60.03:664,60,0	1/1:2,24:26:61.05:665,61,0	1/1:6,30:36:84.20:917,84,0	1/1:1,9:11:32.75:327,33,0	1/1:4,23:27:72.10:759,72,0	0/1:6,7:13:28.03:175,0,28	1/1:5,19:25:53.98:578,54,0	1/1:3,25:28:52.16:799,52,0	1/1:1,10:11:27.07:299,27,0	1/1:6,16:23:24.92:486,25,0	1/1:2,21:24:66:702,66,0	1/1:6,25:30:37.12:632,37,0	1/1:1,11:13:6.88:287,7,0
chr10	39783710	.	G	GCGCTTATGTGCCA	91880.24	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-7.172;DP=761;FS=10.019;HRun=0;HaplotypeScore=187.4143;InbreedingCoeff=0.9952;MQ=57.75;MQ0=2;MQRankSum=-8.457;QD=125.01;ReadPosRankSum=3.591;VQSLOD=4.4145;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,25:50:99:5446,102,0	1/1:4,5:12:23.71:1458,24,0	0/0:15,0:15:45.15:0,45,1658	0/0:11,0:11:30.10:0,30,935	1/1:3,15:24:42.14:2347,42,0	1/1:2,5:13:21.07:1219,21,0	1/1:6,8:18:39.13:2338,39,0	1/1:26,5:44:99:6086,123,0	1/1:4,15:27:60.21:3864,60,0	1/1:5,22:41:99:6162,114,0	1/1:6,6:22:33.11:1543,33,0	1/1:10,23:44:93.32:5639,93,0	1/1:12,14:36:72.25:4139,72,0	1/1:6,18:30:72.25:4250,72,0	1/1:3,24:38:81.07:5236,81,0	1/1:5,15:24:57.20:3334,57,0	1/1:12,11:27:63.22:3496,63,0	1/1:5,8:17:36.12:2152,36,0	1/1:8,4:21:63.20:3155,63,0	1/1:8,16:30:57.20:3480,57,0	1/1:7,6:23:27.09:1274,27,0	1/1:9,13:31:66.23:3545,66,0	1/1:9,16:28:63.22:3593,63,0	1/1:9,8:19:30.10:1458,30,0	1/1:4,15:27:51.18:3250,51,0	1/1:11,19:36:96.33:5690,96,0	1/1:4,25:38:87.08:5724,87,0	1/1:0,10:13:30.10:2003,30,0
chr10	39784234	.	T	TCCTC	20299.16	PASS	AB=0.597;AC=44;AF=0.786;AN=56;BaseQRankSum=-5.797;DP=816;FS=13.712;HRun=0;HaplotypeScore=117.9136;InbreedingCoeff=0.1223;MQ=60.06;MQ0=10;MQRankSum=0.067;QD=25.73;ReadPosRankSum=8.113;VQSLOD=3.2878;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,43:42:42.14:1130,42,0	1/1:1,15:16:21.15:304,21,0	0/0:14,0:8:20.97:0,21,200	0/0:13,0:9:14.93:0,15,118	1/1:0,30:30:62.77:1184,63,0	1/1:2,30:32:39.03:984,39,0	1/1:4,24:30:18.02:414,18,0	0/1:38,0:37:99:215,0,346	1/1:3,28:33:36.12:969,36,0	1/1:2,34:36:99:1704,105,0	1/1:0,29:30:62.32:887,62,0	1/1:48,0:49:99:2468,138,0	1/1:1,25:27:33:827,33,0	1/1:0,32:31:36.12:965,36,0	1/1:1,34:34:35.99:966,36,0	1/1:0,30:31:33.09:882,33,0	1/1:3,25:28:3.52:505,4,0	0/1:3,11:18:24.09:308,0,24	0/1:3,0:23:99:303,0,114	0/1:2,1:20:99:295,0,117	0/1:5,0:26:18.93:48,0,19	1/1:1,24:27:53.26:732,53,0	1/1:28,0:28:72.15:1429,72,0	1/1:31,0:31:60.45:1179,60,0	0/1:2,0:35:6.76:264,0,7	0/1:4,1:34:99:751,0,149	1/1:4,0:36:3.91:434,4,0	0/1:4,0:15:54.87:152,0,55
chr10	39784238	.	T	TC	1178.32	PASS	AB=0.816;AC=7;AF=0.125;AN=56;BaseQRankSum=7.105;DP=757;FS=2.570;HRun=2;HaplotypeScore=148.9744;InbreedingCoeff=0.1110;MQ=59.76;MQ0=10;MQRankSum=-6.079;QD=6.47;ReadPosRankSum=7.166;VQSLOD=0.7920;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:37:39.60:0,40,193	0/0:14,0:14:25.46:0,25,194	0/0:19,0:12:32.77:0,33,334	0/0:11,0:7:15.03:0,15,171	0/0:27,0:26:63.96:0,64,479	0/0:27,0:27:22.71:0,23,151	0/0:25,0:25:18.67:0,19,114	0/0:34,0:34:78.31:0,78,800	0/0:33,0:33:43.02:0,43,267	0/0:35,0:33:84.69:0,85,807	0/0:26,0:26:65.59:0,66,589	0/1:27,23:50:87.33:603,0,87	0/0:25,0:25:31.14:0,31,170	0/0:34,0:33:38.83:0,39,223	0/0:32,0:31:34.15:0,34,172	0/0:31,0:31:33.92:0,34,182	0/0:29,0:28:23.50:0,24,133	0/0:17,0:17:20.02:0,20,143	0/0:22,0:21:48.77:0,49,487	0/0:18,0:18:23.49:0,23,422	0/0:20,0:19:2.17:0,2,36	0/0:25,0:25:64.14:0,64,501	0/1:10,17:27:34.16:356,0,34	0/1:23,9:32:99:279,0,121	0/1:33,0:33:16.09:16,0,45	0/0:32,0:32:28.09:0,28,575	0/1:35,0:35:31.70:32,0,67	1/1:5,0:5:6.66:21,7,0
chr10	39785353	.	GAA	G	14869.53	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-4.334;DP=619;FS=2.697;HRun=11;HaplotypeScore=103.3309;InbreedingCoeff=0.8664;MQ=72.46;MQ0=0;MQRankSum=-2.713;QD=24.87;ReadPosRankSum=4.010;VQSLOD=4.8648;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,28:30:86.95:906,87,0	1/1:2,8:10:18.04:192,18,0	0/0:9,0:10:2.22:0,2,92	0/0:11,0:10:12.47:0,12,102	1/1:7,27:34:75.12:798,75,0	1/1:2,12:14:33.07:351,33,0	1/1:5,15:20:42.07:447,42,0	1/1:2,28:30:81.18:862,81,0	1/1:1,23:25:51.08:598,51,0	1/1:4,17:21:51.06:522,51,0	1/1:4,18:22:48.08:511,48,0	1/1:4,16:20:36.08:383,36,0	1/1:5,22:28:44.67:459,45,0	1/1:1,18:19:48.10:511,48,0	1/1:1,14:15:42.10:447,42,0	1/1:4,25:29:62.87:670,63,0	1/1:2,19:21:51.12:543,51,0	1/1:1,11:13:24.01:311,24,0	1/1:4,17:21:50.85:523,51,0	1/1:4,32:37:93.19:990,93,0	1/1:0,17:18:45.10:479,45,0	1/1:2,21:23:54.12:575,54,0	1/1:5,20:25:59.90:633,60,0	1/1:2,17:19:45.10:479,45,0	1/1:1,28:30:63.11:726,63,0	1/1:4,24:28:72.05:742,72,0	1/1:2,23:25:60.14:639,60,0	1/1:1,20:21:54.12:575,54,0
chr10	39786995	.	TA	T	6584.18	PASS	AB=1.000;AC=51;AF=0.911;AN=56;BaseQRankSum=-6.556;DP=543;FS=3.991;HRun=1;HaplotypeScore=82.8650;InbreedingCoeff=0.6377;MQ=73.64;MQ0=0;MQRankSum=1.106;QD=12.81;ReadPosRankSum=-3.762;VQSLOD=2.3558;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,2:21:34.62:304,35,0	1/1:3,4:7:6.08:63,6,0	0/0:18,0:18:3.94:0,4,271	0/0:11,0:8:15.87:0,16,147	1/1:23,1:24:34.53:296,35,0	1/1:24,0:24:21.59:234,22,0	1/1:22,2:24:38.79:279,39,0	1/1:44,0:44:82.55:573,83,0	1/1:12,0:12:21.58:170,22,0	1/1:11,2:13:18.72:235,19,0	1/1:16,0:16:22.21:192,22,0	1/1:15,1:16:25.25:208,25,0	1/1:21,2:23:42.21:350,42,0	1/1:12,0:12:20.23:141,20,0	1/1:34,0:34:63.22:441,63,0	1/1:19,0:19:25.54:142,26,0	1/1:19,0:19:30.31:204,30,0	1/1:25,1:26:25.85:194,26,0	1/1:15,5:20:37.86:423,38,0	1/1:20,0:20:29.37:304,29,0	1/1:9,0:9:12.57:104,13,0	1/1:13,1:14:27.49:287,27,0	1/1:15,1:16:4.13:99,4,0	1/1:23,0:23:37.11:274,37,0	1/1:14,0:14:13.85:134,14,0	1/1:29,2:31:49.89:450,50,0	1/1:25,4:29:56.77:467,57,0	0/1:4,0:4:4.47:19,0,4
chr10	39787819	.	AG	A	3054.07	PASS	AB=0.631;AC=48;AF=0.857;AN=56;BaseQRankSum=0.305;DP=261;FS=81.266;HRun=1;HaplotypeScore=31.3845;InbreedingCoeff=0.1849;MQ=55.98;MQ0=60;MQRankSum=0.644;QD=13.76;ReadPosRankSum=2.824;VQSLOD=0.3065;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,5:5:6.02:80,6,0	1/1:2,2:3:6.02:79,6,0	0/0:16,0:8:23.97:0,24,279	0/0:23,0:15:25.89:0,26,412	1/1:2,3:4:6.02:80,6,0	1/1:7,5:7:8.86:118,9,0	1/1:4,9:10:21.07:280,21,0	1/1:4,13:16:46.65:570,47,0	1/1:2,5:5:9.03:119,9,0	0/1:4,5:6:46.94:47,0,124	1/1:2,4:2:3.01:40,3,0	1/1:7,0:7:8.16:39,8,0	1/1:2,3:5:6.02:80,6,0	1/1:8,4:9:12.04:160,12,0	1/1:2,7:6:15.05:200,15,0	1/1:1,1:2:3.01:40,3,0	1/1:0,5:3:3.01:40,3,0	1/1:3,8:9:27.03:319,27,0	0/1:2,5:6:35.88:107,0,36	1/1:1,3:3:3.01:40,3,0	1/1:5,5:6:12.04:160,12,0	1/1:7,5:8:9.03:120,9,0	1/1:7,0:6:5.51:29,6,0	1/1:12,0:8:17.04:84,17,0	1/1:3,2:2:3.01:40,3,0	0/1:3,9:7:69.56:142,0,70	1/1:2,6:5:12.04:160,12,0	0/1:5,3:6:26.33:26,0,71
chr10	39788384	.	C	CCT	2201.54	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-2.636;DP=589;FS=0.580;HRun=0;HaplotypeScore=90.5566;InbreedingCoeff=0.9736;MQ=87.56;MQ0=1;MQRankSum=-1.139;QD=37.31;ReadPosRankSum=2.239;VQSLOD=5.9676;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:90.30:0,90,1236	0/0:10,0:10:30.09:0,30,398	0/0:17,0:17:45.15:0,45,612	0/0:24,0:24:55.02:0,55,694	0/0:18,0:18:51.16:0,51,684	0/0:28,0:28:75.25:0,75,1030	0/0:22,0:22:63.21:0,63,864	0/0:32,0:32:81.27:0,81,1106	0/0:25,0:25:66.22:0,66,907	0/0:16,0:16:45.15:0,45,618	0/0:14,0:14:36.12:0,36,493	1/1:1,23:24:66.23:1171,66,0	0/0:19,0:19:51.17:0,51,700	0/0:21,0:21:57.19:0,57,783	0/0:13,0:13:36.12:0,36,495	0/0:21,0:21:57.19:0,57,783	0/0:33,0:33:87.29:0,87,1195	0/0:28,0:27:84.28:0,84,1154	0/0:30,0:30:69.23:0,69,947	0/0:20,0:20:60.20:0,60,823	0/0:14,0:14:42.13:0,42,561	0/0:23,0:23:63.21:0,63,866	1/1:2,6:8:15.05:266,15,0	1/1:4,23:26:51.17:905,51,0	0/0:24,0:24:72.23:0,72,975	0/0:22,0:22:66.22:0,66,907	0/0:20,0:20:51.17:0,51,701	0/0:3,0:3:9.03:0,9,124
chr10	39788867	.	T	TTTG	24444.29	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-13.252;DP=744;FS=2.521;HRun=0;HaplotypeScore=87.0234;InbreedingCoeff=0.9986;MQ=66.48;MQ0=0;MQRankSum=-2.114;QD=39.17;ReadPosRankSum=4.310;VQSLOD=5.6256;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,36:43:93.32:1922,93,0	1/1:2,8:12:24.08:470,24,0	0/0:29,0:27:49.77:0,50,734	0/0:17,0:15:30.57:0,31,425	1/1:14,22:36:63.14:1181,63,0	1/1:7,23:30:60.21:1231,60,0	1/1:7,20:27:51.17:1049,51,0	1/1:13,16:32:57.12:934,57,0	1/1:6,13:19:33.11:682,33,0	1/1:8,23:31:66.21:1274,66,0	1/1:10,19:29:51.06:982,51,0	0/0:25,0:25:66.20:0,66,926	1/1:5,17:23:36.12:744,36,0	1/1:7,22:29:54.18:1092,54,0	1/1:6,19:25:51.17:1046,51,0	1/1:4,25:30:66.23:1358,66,0	1/1:6,25:31:60.21:1239,60,0	1/1:3,12:16:24.08:469,24,0	1/1:14,16:31:51.14:912,51,0	1/1:3,21:24:60.21:1215,60,0	1/1:5,10:16:26.56:557,27,0	1/1:6,19:26:48.08:892,48,0	0/0:26,0:26:72.22:0,72,1004	0/0:23,0:23:62.01:0,62,859	1/1:3,26:29:69.24:1422,69,0	1/1:4,28:32:84.29:1737,84,0	1/1:7,26:34:60.09:1231,60,0	1/1:6,13:19:39.13:806,39,0
chr10	39789536	.	AG	A	2878.40	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=11.218;DP=636;FS=5.868;HRun=1;HaplotypeScore=57.5044;InbreedingCoeff=0.9992;MQ=85.67;MQ0=0;MQRankSum=-0.038;QD=38.90;ReadPosRankSum=1.184;VQSLOD=4.2161;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:66.23:0,66,1055	0/0:8,0:8:24.08:0,24,380	0/0:23,0:23:66.22:0,66,1039	0/0:17,0:17:51.14:0,51,769	0/0:34,0:34:99:0,102,1630	0/0:35,0:35:99:0,105,1655	0/0:24,0:24:72.25:0,72,1149	0/0:34,0:34:99:0,102,1588	0/0:23,0:23:69.22:0,69,1080	0/0:32,0:32:96.31:0,96,1494	0/0:23,0:23:69.24:0,69,1100	1/1:0,26:26:75.25:1049,75,0	0/0:22,0:22:66.23:0,66,1053	0/0:21,0:21:60.20:0,60,951	0/0:26,0:26:78.27:0,78,1247	0/0:26,0:26:78.26:0,78,1225	0/0:17,0:17:48.15:0,48,743	0/0:21,0:21:60.19:0,60,931	0/0:15,0:15:42.14:0,42,670	0/0:25,0:25:75.26:0,75,1199	0/0:14,0:14:42.14:0,42,669	0/0:15,0:15:45.15:0,45,720	1/1:0,27:27:78.26:1091,78,0	1/1:0,21:21:63.21:881,63,0	0/0:21,0:21:63.21:0,63,1007	0/0:22,0:22:66.23:0,66,1055	0/0:27,0:27:81.26:0,81,1272	0/0:15,0:15:38.38:0,38,598
chr10	39790350	.	C	CCCTT	3731.09	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=1.266;DP=682;FS=3.999;HRun=0;HaplotypeScore=144.0788;InbreedingCoeff=0.9208;MQ=60.89;MQ0=1;MQRankSum=-3.503;QD=54.07;ReadPosRankSum=-0.284;VQSLOD=4.8814;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:27.07:0,27,427	0/0:13,0:13:21.94:0,22,330	0/0:29,0:12:16.89:0,17,170	0/0:27,0:17:1.39:0,1,171	0/0:28,0:28:43.90:0,44,796	0/0:24,0:24:33.07:0,33,480	0/0:23,0:23:39.09:0,39,563	0/0:21,0:21:36.07:0,36,464	0/0:22,0:22:51.16:0,51,838	0/0:34,0:34:82.85:0,83,1073	0/0:37,0:37:89.45:0,89,1352	1/1:12,18:30:84.16:1802,84,0	0/0:19,0:19:37.94:0,38,616	0/0:28,0:28:48.10:0,48,707	0/0:21,0:21:54.60:0,55,811	0/0:28,0:28:66.64:0,67,858	0/0:26,0:26:57.11:0,57,859	0/0:13,0:13:32.60:0,33,373	0/0:20,0:19:42.06:0,42,554	0/0:22,0:22:54.14:0,54,867	0/0:17,0:17:40.14:0,40,592	0/0:39,0:38:84.25:0,84,1349	1/1:11,11:22:54.15:1178,54,0	1/1:7,10:17:36.07:751,36,0	0/0:24,0:24:33.07:0,33,461	0/0:35,0:35:84.18:0,84,1315	0/0:26,0:26:35.89:0,36,478	0/0:18,0:18:32.70:0,33,449
chr10	39790388	.	T	TTTCCTTCCTTCC	13036.24	PASS	AB=1.000;AC=48;AF=0.889;AN=54;BaseQRankSum=-7.085;DP=697;FS=20.834;HRun=0;HaplotypeScore=210.4167;InbreedingCoeff=0.0573;MQ=50.61;MQ0=5;MQRankSum=3.329;QD=19.46;ReadPosRankSum=-2.019;VQSLOD=2.0306;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:8,14:28:3.01:175,3,0	1/1:8,0:8:11.85:162,12,0	./.	0/0:15,0:6:2.98:0,3,21	1/1:32,0:32:32.89:353,33,0	1/1:4,15:20:6.02:272,6,0	1/1:26,0:26:45:803,45,0	1/1:20,0:19:26.89:323,27,0	1/1:15,9:25:3.01:175,3,0	1/1:28,0:28:59.86:896,60,0	1/1:38,0:38:78.13:1333,78,0	0/1:14,0:31:81.56:82,0,287	1/1:26,0:26:26.86:630,27,0	1/1:11,17:30:6.02:349,6,0	1/1:28,0:28:34.43:337,34,0	1/1:35,0:33:68.80:1223,69,0	1/1:22,0:22:18.32:225,18,0	0/1:14,0:14:99:244,0,142	1/1:11,7:19:30.02:899,30,0	1/1:9,10:20:23.94:515,24,0	1/1:23,0:23:47.53:759,48,0	1/1:34,0:33:30.50:352,30,0	0/1:14,0:24:18.06:18,0,93	0/1:10,0:31:24.12:24,0,83	1/1:5,14:21:6.02:323,6,0	1/1:11,22:35:63.15:1712,63,0	1/1:4,21:32:6.02:328,6,0	1/1:7,8:15:9.03:524,9,0
chr10	39791872	.	AC	A	15720.66	PASS	AC=54;AF=0.964;AN=56;DP=523;FS=0.000;HRun=4;HaplotypeScore=364.4928;InbreedingCoeff=0.4745;MQ=34.94;MQ0=0;QD=30.29;VQSLOD=1.7586;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,30:33:78.24:930,78,0	1/1:0,8:8:24.07:285,24,0	1/1:2,1:2:3:26,3,0	0/0:3,1:2:0:0,0,0	1/1:2,26:28:66.20:786,66,0	1/1:2,22:24:63.19:749,63,0	1/1:3,17:20:48.14:567,48,0	1/1:2,22:22:60.18:719,60,0	1/1:1,13:14:36.11:431,36,0	1/1:0,13:13:39.12:468,39,0	1/1:2,12:14:36.11:431,36,0	1/1:0,21:21:51.16:611,51,0	1/1:3,25:28:75.23:890,75,0	1/1:2,15:17:42.13:493,42,0	1/1:0,35:35:99:1168,99,0	1/1:2,24:26:69.21:825,69,0	1/1:1,12:13:36.11:431,36,0	1/1:2,9:11:24.07:284,24,0	1/1:5,14:17:39.12:468,39,0	1/1:1,19:20:51.16:609,51,0	1/1:2,15:17:36.11:428,36,0	1/1:3,14:17:39.12:467,39,0	1/1:2,18:20:51.16:608,51,0	1/1:0,14:14:36.11:431,36,0	1/1:0,23:23:66.20:783,66,0	1/1:1,25:26:75.23:899,75,0	1/1:0,25:25:63.19:754,63,0	1/1:0,6:6:15.05:178,15,0
chr10	39792132	.	A	AT	1278.89	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-3.144;DP=574;FS=0.567;HRun=9;HaplotypeScore=69.2530;InbreedingCoeff=0.9976;MQ=68.43;MQ0=0;MQRankSum=-1.029;QD=23.25;ReadPosRankSum=0.894;VQSLOD=4.4688;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:68.95:0,69,599	0/0:14,0:14:38.01:0,38,314	0/0:17,0:17:35.64:0,36,291	0/0:15,0:13:28.18:0,28,220	0/0:23,0:23:47.94:0,48,413	0/0:21,0:21:50.98:0,51,443	0/0:28,0:29:73.98:0,74,623	0/0:29,1:30:38.73:0,39,555	0/0:19,0:19:47.02:0,47,396	0/0:22,0:22:65.99:0,66,573	0/0:27,0:27:71.96:0,72,625	1/1:1,10:11:30.08:332,30,0	0/0:23,0:23:65.99:0,66,573	0/0:11,0:11:32.99:0,33,286	0/0:14,0:14:41.03:0,41,344	0/0:16,0:16:47.97:0,48,413	0/0:25,0:25:62.99:0,63,547	0/0:16,0:16:44.99:0,45,391	0/0:17,0:17:35.99:0,36,313	0/0:24,0:24:56.96:0,57,495	0/0:32,0:32:71.95:0,72,621	0/0:21,1:22:20.78:0,21,409	1/1:3,24:27:34.54:592,35,0	1/1:1,16:17:45.12:498,45,0	0/0:22,0:22:56.97:0,57,495	0/0:16,0:16:44.99:0,45,391	0/0:15,0:16:44.03:0,44,370	0/0:18,0:18:47.99:0,48,417
chr10	39794231	.	AG	A	7095.17	PASS	AB=0.756;AC=41;AF=0.732;AN=56;BaseQRankSum=4.107;DP=654;FS=10.901;HRun=11;HaplotypeScore=84.4985;InbreedingCoeff=0.2765;MQ=77.17;MQ0=3;MQRankSum=-2.144;QD=12.34;ReadPosRankSum=4.202;VQSLOD=3.7185;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:11,37:49:30.69:656,31,0	1/1:2,6:8:14.93:116,15,0	0/1:29,0:23:10.24:10,0,85	0/1:29,6:27:42.95:57,0,43	1/1:6,16:24:32.50:329,32,0	0/1:18,3:21:13.19:13,0,283	0/0:25,3:29:22.57:0,23,592	1/1:6,14:22:43.92:340,44,0	0/1:14,4:18:40.93:41,0,200	1/1:6,15:21:44.93:369,45,0	0/1:3,8:13:0.98:172,0,1	0/0:29,0:29:37.50:0,38,584	0/1:2,10:12:2.02:191,0,2	1/1:3,18:22:27.20:416,27,0	1/1:3,19:23:55.93:447,56,0	1/1:3,22:26:26.99:417,27,0	1/1:5,18:25:49.01:381,49,0	1/1:3,10:14:32:252,32,0	0/1:8,13:20:50.75:231,0,51	1/1:7,12:19:18.93:200,19,0	0/1:13,18:31:4.79:297,0,5	1/1:3,19:22:49.98:400,50,0	0/1:13,2:16:6.96:7,0,287	0/0:19,2:21:20.45:0,20,409	1/1:6,20:27:23.97:392,24,0	1/1:5,15:20:44.92:366,45,0	1/1:5,26:35:58.48:568,58,0	1/1:0,18:19:52.98:425,53,0
chr10	39794692	.	CA	C	143.14	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.192;DP=730;FS=1.392;HRun=2;HaplotypeScore=89.4748;InbreedingCoeff=0.9896;MQ=81.08;MQ0=0;MQRankSum=-1.082;QD=15.90;ReadPosRankSum=-2.119;VQSLOD=3.0763;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:84.26:0,84,1237	1/1:0,9:9:18.06:234,18,0	0/0:22,0:22:53.36:0,53,827	0/0:29,0:29:78.15:0,78,1111	0/0:18,0:18:54.15:0,54,766	0/0:25,0:25:75.24:0,75,1103	0/0:22,0:22:66.20:0,66,949	0/0:33,0:33:93.31:0,93,1389	0/0:22,0:22:66.21:0,66,964	0/0:27,0:27:78.25:0,78,1145	0/0:20,0:20:60.20:0,60,899	0/0:29,0:29:87.28:0,87,1284	0/0:26,0:26:78.26:0,78,1168	0/0:33,0:33:99:0,99,1442	0/0:36,0:36:99:0,108,1619	0/0:34,0:34:99:0,102,1486	0/0:42,0:42:99:0,123,1837	0/0:29,0:29:87.29:0,87,1303	0/0:16,0:16:48.16:0,48,719	0/0:15,0:15:45.15:0,45,674	0/0:44,0:44:99:0,132,1954	0/0:32,0:32:96.28:0,96,1376	0/0:25,0:25:75.24:0,75,1100	0/0:30,0:30:81.27:0,81,1208	0/0:12,0:12:32.78:0,33,493	0/0:34,0:34:96.32:0,96,1417	0/0:30,0:30:90.30:0,90,1344	0/0:8,0:8:24.08:0,24,343
chr10	39797209	.	TTTG	T	14436.39	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-8.415;DP=606;FS=0.981;HRun=0;HaplotypeScore=102.5976;InbreedingCoeff=0.9706;MQ=73.10;MQ0=0;MQRankSum=-0.013;QD=29.89;ReadPosRankSum=4.880;VQSLOD=5.1738;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,17:23:26.93:605,27,0	1/1:2,9:11:24.08:339,24,0	0/0:27,0:25:16.01:0,16,504	0/0:16,0:14:21.07:0,21,395	1/1:8,26:34:75.25:1058,75,0	0/0:10,0:34:69.23:0,69,925	0/0:6,0:22:39.11:0,39,499	1/1:9,12:21:36.11:490,36,0	0/0:6,0:24:54.18:0,54,716	1/1:5,17:22:54.18:762,54,0	1/1:6,9:16:30.07:402,30,0	1/1:1,14:15:36.12:508,36,0	1/1:5,15:20:26.88:381,27,0	1/1:5,24:29:66.22:924,66,0	1/1:3,22:25:54.18:762,54,0	1/1:5,18:23:51.17:720,51,0	1/1:2,14:16:36.12:508,36,0	1/1:6,9:15:27.09:379,27,0	1/1:8,14:22:45.11:608,45,0	1/1:3,25:28:60.20:839,60,0	1/1:3,19:22:48.16:677,48,0	1/1:3,11:14:30.10:423,30,0	1/1:5,17:22:48.05:670,48,0	1/1:3,18:21:51.17:719,51,0	1/1:4,18:22:42.14:593,42,0	1/1:7,20:27:54.18:759,54,0	1/1:2,30:32:87.29:1227,87,0	1/1:1,2:3:6.02:85,6,0
chr10	39797597	.	G	GTT	1303.08	PASS	AB=1.000;AC=38;AF=0.679;AN=56;BaseQRankSum=-5.367;DP=412;FS=3.574;HRun=12;HaplotypeScore=79.0608;InbreedingCoeff=0.4379;MQ=61.46;MQ0=19;MQRankSum=1.913;QD=4.95;ReadPosRankSum=-1.103;VQSLOD=-0.3796;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:16:16.18:0,16,88	1/1:7,0:7:6.31:16,6,0	0/0:34,0:7:6.19:0,6,40	0/0:52,0:14:19.42:0,19,148	1/1:21,0:21:8.58:86,9,0	1/1:7,3:10:12.69:200,13,0	1/1:10,7:17:25.12:362,25,0	1/1:22,0:20:0.11:41,0,0	1/1:6,6:11:26.44:286,26,0	1/1:20,0:19:12.67:118,13,0	0/1:14,0:14:2.07:22,0,2	1/1:9,0:9:1.72:3,2,0	0/1:8,0:9:5.90:6,0,20	0/0:4,0:10:21.33:0,21,88	0/1:10,0:10:20.52:36,0,21	1/1:6,0:6:3.68:12,4,0	1/1:18,0:15:11.82:55,12,0	0/0:8,0:7:0.36:0,0,4	1/1:18,0:14:10.26:73,10,0	1/1:10,0:10:5.15:23,5,0	1/1:5,0:4:2.56:8,3,0	0/0:7,0:7:2.57:0,3,10	1/1:11,0:11:4.99:26,5,0	1/1:12,0:10:9.33:42,9,0	0/0:16,0:16:4.56:0,5,15	1/1:12,0:11:5.36:18,5,0	1/1:16,0:15:0.25:30,0,0	0/1:4,0:3:0.28:0,0,1
chr10	39797608	.	TTGG	T	5107.53	PASS	AB=0.990;AC=45;AF=0.804;AN=56;BaseQRankSum=-6.119;DP=399;FS=13.186;HRun=0;HaplotypeScore=68.5394;InbreedingCoeff=0.1249;MQ=56.33;MQ0=28;MQRankSum=1.760;QD=17.31;ReadPosRankSum=3.121;VQSLOD=3.2815;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:14:11.47:82,11,0	1/1:7,0:7:17.09:145,17,0	0/0:42,0:6:2.73:0,3,64	0/0:62,0:15:19.66:0,20,183	1/1:17,1:18:30.30:524,30,0	0/1:13,0:13:32.02:32,0,87	0/1:16,0:16:20.48:37,0,20	0/1:13,1:12:0.30:263,0,0	0/1:14,0:13:4.64:145,0,5	1/1:18,0:17:48.11:579,48,0	1/1:10,2:12:20.87:386,21,0	1/1:9,0:9:6.01:69,6,0	1/1:6,0:6:13.19:71,13,0	1/1:10,0:9:18.53:97,19,0	1/1:12,0:11:6.37:322,6,0	1/1:8,0:8:5.75:178,6,0	0/1:17,0:14:7.40:162,0,7	1/1:5,1:5:9.02:110,9,0	1/1:14,1:10:27.04:306,27,0	1/1:10,1:9:23.11:241,23,0	1/1:6,0:4:8.69:76,9,0	1/1:5,1:6:18.06:260,18,0	0/1:6,0:6:24.15:78,0,24	1/1:11,0:9:18.31:172,18,0	1/1:0,10:10:6.02:92,6,0	1/1:11,1:11:6.62:344,7,0	1/1:16,0:14:19.16:305,19,0	0/1:7,0:5:9.38:32,0,9
chr10	39797609	.	TGG	T	5889.79	PASS	AB=0.810;AC=47;AF=0.839;AN=56;BaseQRankSum=-6.004;DP=394;FS=8.183;HRun=2;HaplotypeScore=60.8632;InbreedingCoeff=0.1787;MQ=56.46;MQ0=28;MQRankSum=2.314;QD=20.38;ReadPosRankSum=3.829;VQSLOD=2.4892;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:13:19.35:131,19,0	1/1:4,2:6:15.04:196,15,0	0/0:42,0:6:3.28:0,3,66	0/0:63,0:15:18.44:0,18,161	1/1:13,6:19:30.09:633,30,0	0/1:11,2:13:41.30:41,0,68	1/1:13,2:15:3.93:64,4,0	0/1:11,2:11:0.36:247,0,0	1/1:12,2:13:3.49:141,3,0	1/1:15,2:16:48.13:671,48,0	1/1:6,5:12:20.89:448,21,0	1/1:0,9:9:6.02:88,6,0	1/1:6,0:6:14.60:90,15,0	1/1:10,0:9:22.84:128,23,0	1/1:9,3:11:6.31:352,6,0	1/1:5,2:7:5.76:221,6,0	0/1:12,5:14:16.90:194,0,17	1/1:4,2:5:9.02:100,9,0	1/1:14,1:10:27.06:355,27,0	1/1:9,1:8:21.06:279,21,0	1/1:6,0:4:9.01:97,9,0	1/1:4,2:6:18.06:242,18,0	0/1:1,0:6:25.33:79,0,25	1/1:8,3:9:18.44:218,18,0	1/1:10,0:10:6.02:66,6,0	1/1:11,1:11:4.71:372,5,0	1/1:11,5:14:20.98:396,21,0	0/1:7,0:5:22.39:38,0,22
chr10	39797631	.	TTTTTG	T	1470.28	PASS	AB=0.967;AC=41;AF=0.732;AN=56;BaseQRankSum=-1.564;DP=389;FS=16.664;HRun=0;HaplotypeScore=74.2013;InbreedingCoeff=-0.1212;MQ=36.81;MQ0=49;MQRankSum=-0.971;QD=4.05;ReadPosRankSum=-1.347;VQSLOD=-0.1639;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:21,0:17:13.96:14,0,82	1/1:6,0:6:3.45:22,3,0	0/0:20,0:2:0.69:0,1,13	0/1:42,0:4:0:0,0,0	1/1:23,0:21:14.60:78,15,0	0/1:5,7:12:99:216,0,117	1/1:7,5:11:18.49:289,18,0	0/1:19,0:18:11.81:65,0,12	1/1:7,7:13:27.01:390,27,0	1/1:11,0:9:10.15:37,10,0	0/1:14,0:13:11.86:42,0,12	1/1:13,0:11:6.55:20,7,0	0/0:6,0:6:5.18:0,5,47	0/1:7,0:6:21.41:21,0,28	0/1:10,0:8:14.22:14,0,23	0/1:12,0:11:54.02:54,0,67	1/1:16,0:12:5.46:38,5,0	1/1:10,0:7:8.32:33,8,0	1/1:14,0:9:7.91:37,8,0	1/1:15,0:12:10.77:54,11,0	1/1:10,0:6:4.13:20,4,0	1/1:4,0:4:3.85:22,4,0	1/1:7,0:7:2.97:20,3,0	1/1:17,0:13:4.56:20,5,0	1/1:10,0:10:2.04:7,2,0	0/1:10,0:10:16.30:16,0,33	0/1:17,0:15:14.15:14,0,27	0/1:17,0:12:9.97:73,0,10
chr10	39797632	.	TTTTG	T	1709.01	PASS	AB=1.000;AC=44;AF=0.786;AN=56;BaseQRankSum=-1.626;DP=369;FS=41.799;HRun=0;HaplotypeScore=63.5111;InbreedingCoeff=-0.1441;MQ=36.49;MQ0=48;MQRankSum=-0.021;QD=5.19;ReadPosRankSum=-1.905;VQSLOD=-0.3863;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:21,0:16:4.04:4,0,66	1/1:4,0:4:2.98:21,3,0	1/1:20,0:2:0.26:2,0,0	0/0:40,0:4:0:0,0,0	1/1:19,1:18:15.35:116,15,0	0/1:12,0:12:94.87:168,0,95	1/1:11,0:10:18.49:220,18,0	1/1:16,2:17:1.04:91,1,0	1/1:13,1:13:27.01:300,27,0	1/1:11,0:9:18.97:96,19,0	0/1:12,0:11:2.35:30,0,2	1/1:13,0:11:9.39:43,9,0	0/1:8,0:8:9.65:10,0,23	0/1:8,0:7:11.82:12,0,42	0/1:8,0:6:15.08:29,0,15	0/1:12,0:11:50.12:65,0,50	1/1:16,0:12:10.12:61,10,0	1/1:9,0:6:11.55:69,12,0	1/1:13,0:8:15.05:97,15,0	1/1:14,0:11:14.66:93,15,0	1/1:8,0:5:6.60:27,7,0	1/1:3,0:3:3.44:21,3,0	1/1:7,0:7:2.84:20,3,0	1/1:16,1:13:7.87:57,8,0	1/1:9,0:9:6.48:22,6,0	0/1:11,0:11:37.03:54,0,37	0/1:13,0:12:16.84:43,0,17	0/1:17,0:12:15.58:75,0,16
chr10	39797633	.	TTTG	T	2075.05	PASS	AB=0.964;AC=45;AF=0.804;AN=56;BaseQRankSum=-2.008;DP=339;FS=48.258;HRun=0;HaplotypeScore=49.2057;InbreedingCoeff=-0.0217;MQ=35.38;MQ0=48;MQRankSum=0.662;QD=6.48;ReadPosRankSum=-1.710;VQSLOD=0.2157;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:14:1.57:0,2,34	1/1:3,0:3:2.98:21,3,0	1/1:20,0:2:4.53:15,5,0	0/1:39,0:4:0:0,0,0	1/1:16,1:15:9.67:148,10,0	0/1:12,0:12:73.94:140,0,74	1/1:11,0:10:18.48:188,18,0	1/1:14,1:14:20.98:151,21,0	1/1:14,0:13:26.88:242,27,0	1/1:10,1:9:22.78:158,23,0	1/1:8,0:7:7.59:37,8,0	1/1:12,0:10:11.86:79,12,0	0/1:8,0:8:4.29:15,0,4	0/1:5,0:5:5.25:5,0,38	0/1:7,0:5:2.58:33,0,3	0/1:7,3:9:25.90:81,0,26	1/1:15,0:11:11.85:78,12,0	1/1:8,0:5:11.84:79,12,0	1/1:11,0:6:17.90:132,18,0	1/1:13,1:11:19.08:145,19,0	1/1:7,1:5:12.73:80,13,0	1/1:2,0:2:3.44:21,3,0	1/1:7,0:7:3.44:21,3,0	1/1:14,0:10:9.58:51,10,0	1/1:8,0:8:11.65:72,12,0	0/1:13,0:12:28.67:66,0,29	0/1:9,1:9:12.42:75,0,12	0/1:17,0:12:14.91:78,0,15
chr10	39797634	.	TTG	T	2267.74	PASS	AB=0.965;AC=46;AF=0.821;AN=56;BaseQRankSum=-1.003;DP=326;FS=36.166;HRun=0;HaplotypeScore=43.7674;InbreedingCoeff=0.0409;MQ=34.31;MQ0=47;MQRankSum=-2.146;QD=8.04;ReadPosRankSum=-0.607;VQSLOD=1.2516;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:18,1:14:1.53:12,0,2	1/1:3,0:3:2.98:21,3,0	1/1:19,0:2:4.99:25,5,0	0/0:40,0:4:0:0,0,0	1/1:16,1:15:9.69:133,10,0	0/1:12,0:12:53.81:111,0,54	1/1:10,0:9:18.44:155,18,0	1/1:15,0:14:31.06:199,31,0	1/1:14,0:13:26.29:201,26,0	1/1:8,3:9:26.74:199,27,0	1/1:8,0:7:10.44:53,10,0	1/1:7,2:7:11.95:115,12,0	1/1:8,0:8:10.76:54,11,0	0/0:3,1:4:0.90:0,1,25	1/1:7,0:5:7.79:52,8,0	0/1:9,1:9:8:86,0,8	1/1:15,0:11:11.85:78,12,0	1/1:7,1:5:11.89:97,12,0	1/1:11,0:6:17.90:132,18,0	1/1:12,0:10:20.81:149,21,0	1/1:8,0:5:14.81:98,15,0	1/1:2,0:2:3.44:21,3,0	1/1:7,0:7:4.20:23,4,0	1/1:12,1:9:9.12:62,9,0	1/1:5,0:5:11.70:73,12,0	0/1:12,1:12:0.24:98,0,0	0/1:9,0:8:5.37:60,0,5	0/1:17,0:12:18.57:79,0,19
chr10	39797673	.	CG	C	9057.85	PASS	AB=0.658;AC=42;AF=0.808;AN=52;BaseQRankSum=-2.946;DP=407;FS=14.840;HRun=1;HaplotypeScore=49.2758;InbreedingCoeff=0.5240;MQ=40.29;MQ0=47;MQRankSum=1.198;QD=24.82;ReadPosRankSum=0.241;VQSLOD=3.3089;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,21:20:30.10:415,30,0	1/1:0,8:8:21.07:293,21,0	./.	./.	1/1:2,16:16:27.09:367,27,0	0/0:11,0:11:24.08:0,24,367	0/0:15,0:10:27.09:0,27,414	1/1:3,16:16:45.15:624,45,0	0/0:16,0:15:42.14:0,42,663	1/1:1,14:14:39.09:521,39,0	1/1:1,18:18:36.12:499,36,0	1/1:2,10:10:24.08:334,24,0	1/1:0,13:13:27.09:377,27,0	1/1:0,12:12:36.12:502,36,0	1/1:2,13:13:33.04:437,33,0	0/1:4,9:10:23.66:266,0,24	0/1:11,19:22:99:257,0,200	0/1:6,7:8:4.11:191,0,4	1/1:3,15:14:39.13:530,39,0	1/1:1,19:17:42.07:549,42,0	1/1:4,11:10:27.05:355,27,0	1/1:1,7:8:18.06:251,18,0	1/1:0,16:16:36.08:479,36,0	1/1:4,14:12:30.10:419,30,0	1/1:2,7:7:18.02:230,18,0	1/1:3,15:15:42.14:587,42,0	1/1:3,19:19:36.12:502,36,0	0/1:5,2:4:37.06:74,0,37
chr10	39797883	.	C	CT	15038.04	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-5.111;DP=586;FS=13.504;HRun=7;HaplotypeScore=60.9507;InbreedingCoeff=0.9455;MQ=73.27;MQ0=0;MQRankSum=-6.340;QD=27.10;ReadPosRankSum=3.820;VQSLOD=4.5265;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,24:26:63.19:761,63,0	1/1:0,7:7:21.06:254,21,0	0/0:14,0:13:31.85:0,32,290	0/0:17,0:15:29.87:0,30,272	1/1:1,27:28:72.17:852,72,0	1/1:0,0:31:89.09:453,89,0	1/1:6,0:23:48.88:248,49,0	1/1:5,24:29:66.15:753,66,0	1/1:2,1:17:37.38:190,37,0	1/1:1,25:26:63.18:749,63,0	1/1:1,19:21:57.04:667,57,0	1/1:2,13:15:30.09:362,30,0	1/1:1,23:24:60.18:725,60,0	1/1:2,19:21:48.15:580,48,0	1/1:2,24:26:66.20:797,66,0	1/1:2,16:18:45.14:544,45,0	1/1:2,31:33:81.25:979,81,0	1/1:1,10:11:30.09:362,30,0	1/1:3,17:20:51.11:578,51,0	1/1:1,15:16:42.13:507,42,0	1/1:2,24:26:63.19:761,63,0	1/1:1,12:13:36.11:435,36,0	1/1:1,18:19:48.15:579,48,0	1/1:0,18:18:45.14:544,45,0	1/1:0,18:18:48.14:569,48,0	1/1:2,21:23:60.16:701,60,0	1/1:2,33:34:84.12:1015,84,0	1/1:1,9:10:6.02:72,6,0
chr10	39798169	.	C	CTCAA	31391.52	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=9.081;DP=651;FS=5.232;HRun=0;HaplotypeScore=135.1483;InbreedingCoeff=0.9839;MQ=74.65;MQ0=0;MQRankSum=-12.312;QD=60.95;ReadPosRankSum=3.752;VQSLOD=6.9927;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,28:35:87.30:2159,87,0	1/1:2,7:9:27.02:594,27,0	0/0:26,0:26:73.98:0,74,1257	0/0:30,0:30:68.59:0,69,1160	1/1:3,7:11:27.01:523,27,0	0/0:24,0:24:72.23:0,72,1284	0/0:32,0:32:90.29:0,90,1612	1/1:15,18:35:66.20:1602,66,0	0/0:24,0:24:51.17:0,51,929	1/1:3,22:26:69.24:1786,69,0	1/1:3,5:8:18.06:464,18,0	1/1:3,28:31:75.22:1918,75,0	1/1:1,31:33:87.30:2290,87,0	1/1:2,29:31:78.27:2054,78,0	1/1:5,29:35:84.25:2157,84,0	1/1:3,30:33:32.09:2159,32,0	1/1:4,16:20:45.15:1187,45,0	1/1:1,3:4:9.03:237,9,0	1/1:11,11:22:48.12:1164,48,0	1/1:3,17:21:54.15:1363,54,0	1/1:2,23:26:63.17:1578,63,0	1/1:6,12:18:42.14:1066,42,0	1/1:2,11:13:33.11:868,33,0	1/1:6,25:31:63.17:1578,63,0	1/1:3,15:19:45.15:1145,45,0	1/1:6,20:27:69.24:1802,69,0	1/1:4,14:18:39.13:988,39,0	1/1:0,9:9:27.09:712,27,0
chr10	39799444	.	GGT	G	2296.78	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=4.339;DP=767;FS=2.804;HRun=0;HaplotypeScore=104.2717;InbreedingCoeff=0.9916;MQ=76.73;MQ0=1;MQRankSum=0.009;QD=27.02;ReadPosRankSum=1.056;VQSLOD=4.7594;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:29:60.01:0,60,527	0/0:12,0:12:36.12:0,36,594	0/0:32,1:33:31.64:0,32,954	0/0:30,0:30:60.18:0,60,960	0/0:35,0:35:87.30:0,87,1436	1/1:5,21:26:60.19:751,60,0	1/1:8,19:27:54.17:676,54,0	0/0:33,0:33:81.27:0,81,1310	1/1:3,29:32:81.26:1013,81,0	0/0:27,0:27:69.24:0,69,1140	0/0:27,0:27:72.25:0,72,1175	0/0:37,0:37:84.17:0,84,845	0/0:4,0:26:66.04:0,66,601	0/0:8,0:35:93.08:0,93,908	0/0:40,0:40:99:0,105,1724	0/0:32,0:32:81.28:0,81,1336	0/0:36,0:36:93.32:0,93,1522	0/0:9,0:9:27.09:0,27,446	0/0:24,0:24:48.16:0,48,793	0/0:29,0:29:72.25:0,72,1183	0/0:30,1:31:43.75:0,44,1249	0/0:26,0:26:63.22:0,63,1040	0/0:21,0:21:13.69:0,14,473	0/0:13,0:13:30.07:0,30,315	0/0:22,0:22:60.16:0,60,937	0/0:33,0:33:84.27:0,84,1361	0/0:30,0:30:81.28:0,81,1337	0/0:11,0:11:33.11:0,33,545
chr10	39800577	.	GA	G	676.34	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=6.392;DP=604;FS=5.846;HRun=9;HaplotypeScore=64.7745;InbreedingCoeff=0.9641;MQ=53.95;MQ0=47;MQRankSum=1.498;QD=16.10;ReadPosRankSum=2.075;VQSLOD=3.8359;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:21:36.11:0,36,415	0/0:11,0:11:30.09:0,30,343	0/0:26,0:9:13.25:0,13,109	0/0:21,0:5:9.11:0,9,65	0/0:31,0:31:69.07:0,69,793	1/1:5,22:27:25.41:487,25,0	1/1:1,6:7:18.01:165,18,0	0/0:20,0:9:24.07:0,24,277	1/1:2,6:7:18.01:165,18,0	0/0:28,0:26:66.19:0,66,760	0/0:25,0:25:60.17:0,60,682	0/0:19,0:19:33.10:0,33,378	0/0:14,0:13:36.11:0,36,411	0/0:20,0:19:42.12:0,42,484	0/0:25,0:24:60.18:0,60,690	0/0:16,0:15:39.12:0,39,450	0/0:25,0:24:39.11:0,39,447	0/0:26,0:22:41.89:0,42,454	0/0:20,0:16:42.07:0,42,460	0/0:31,0:31:84.20:0,84,939	0/0:16,0:14:33.06:0,33,365	0/0:16,0:16:33.09:0,33,370	0/0:29,0:28:66.19:0,66,754	0/0:19,0:16:45.13:0,45,519	0/0:28,0:28:69.15:0,69,765	0/0:27,0:24:66.20:0,66,761	0/0:28,0:26:66.19:0,66,757	0/0:15,0:13:36.11:0,36,414
chr10	39801622	.	TACATGCACAC	T	12089.89	PASS	AB=0.708;AC=43;AF=0.768;AN=56;BaseQRankSum=-5.061;DP=968;FS=1.563;HRun=0;HaplotypeScore=342.0024;InbreedingCoeff=0.3347;MQ=48.23;MQ0=33;MQRankSum=-3.118;QD=13.66;ReadPosRankSum=0.435;VQSLOD=2.8709;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:21,12:31:18.53:420,19,0	1/1:2,19:19:5.85:171,6,0	0/0:32,0:16:30.10:0,30,962	0/0:51,0:30:62.62:0,63,1699	0/1:5,33:37:0:0,0,0	0/1:28,0:28:65.76:66,0,1355	0/1:26,0:26:99:176,0,776	1/1:14,28:40:75.21:1361,75,0	0/1:45,0:45:0.77:1,0,2936	1/1:6,34:39:93.25:2276,93,0	1/1:4,17:20:0.47:1,0,0	1/1:3,36:38:5.76:187,6,0	1/1:8,34:42:9.03:283,9,0	1/1:6,36:41:8.96:282,9,0	1/1:9,43:49:2.83:95,3,0	1/1:5,40:42:15.05:398,15,0	0/1:8,19:26:23.94:88,0,24	1/1:2,7:8:9.03:282,9,0	1/1:9,15:24:42.10:974,42,0	1/1:3,28:29:2.98:57,3,0	0/1:14,42:54:0:0,0,0	1/1:7,32:33:2.81:57,3,0	0/1:5,21:22:0:1,0,0	0/1:7,32:39:0.17:1,0,0	0/1:7,19:20:0:0,0,0	1/1:5,39:43:99:2988,114,0	1/1:5,35:40:63.21:1831,63,0	1/1:4,6:10:3.01:94,3,0
chr10	39801632	.	C	CAT	9071.83	PASS	AB=0.956;AC=32;AF=0.593;AN=54;BaseQRankSum=-7.284;DP=890;FS=0.462;HRun=0;HaplotypeScore=277.6761;InbreedingCoeff=0.2313;MQ=49.45;MQ0=35;MQRankSum=6.099;QD=13.09;ReadPosRankSum=-2.827;VQSLOD=3.5785;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:26,9:33:24.04:393,24,0	1/1:20,1:19:6.02:102,6,0	0/0:34,0:21:57:0,57,718	0/0:49,0:32:73.98:0,74,986	0/1:36,1:36:0:0,0,0	1/1:0,26:26:60.21:1158,60,0	1/1:1,28:29:49.82:982,50,0	1/1:31,0:29:78.23:1387,78,0	1/1:1,41:42:99:2200,114,0	1/1:37,1:37:6.10:997,6,0	0/1:18,1:17:0:0,0,0	0/1:37,1:37:3.44:38,0,3	0/1:35,0:36:6:35,0,6	0/0:37,1:37:2.52:0,3,14	0/0:45,2:44:0.73:0,1,6	0/1:40,2:39:13.39:82,0,13	0/1:21,3:22:3.69:7,0,4	0/1:9,1:8:9.92:30,0,10	1/1:17,0:17:10.36:460,10,0	1/1:29,0:27:3.01:58,3,0	0/1:43,1:42:0:0,0,0	1/1:32,3:28:3.01:58,3,0	0/1:21,3:19:0.02:0,0,0	0/1:35,0:35:0.02:0,0,0	./.	0/1:40,1:40:12.99:804,0,13	0/1:40,0:39:55.05:281,0,55	0/0:6,0:6:2.50:0,2,9
chr10	39802083	.	TAAG	T	861.33	PASS	AB=0.772;AC=3;AF=0.054;AN=56;BaseQRankSum=8.300;DP=769;FS=0.000;HRun=0;HaplotypeScore=106.3730;InbreedingCoeff=-0.0568;MQ=55.26;MQ0=30;MQRankSum=3.870;QD=8.61;ReadPosRankSum=3.042;VQSLOD=2.9746;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:27,6:31:99:168,0,1430	0/0:7,0:7:21.07:0,21,482	0/0:27,0:13:29.70:0,30,667	0/0:25,0:9:27.05:0,27,534	0/0:32,0:26:69.24:0,69,1590	0/0:30,0:26:66.16:0,66,1470	0/0:18,0:17:48.10:0,48,1054	0/0:34,0:29:90.31:0,90,2073	0/0:21,0:20:57.20:0,57,1281	0/0:31,0:26:78.27:0,78,1798	0/0:29,0:25:71.46:0,71,1562	0/0:31,0:30:81.28:0,81,1867	0/1:18,12:29:99:362,0,960	0/1:25,12:36:99:431,0,1554	0/0:41,0:40:99:0,117,2526	0/0:32,0:32:90.31:0,90,2075	0/0:33,0:33:78.27:0,78,1747	0/0:18,0:16:48.16:0,48,1105	0/0:21,0:16:45.15:0,45,1015	0/0:31,0:30:87.24:0,87,1944	0/0:35,0:35:96.33:0,96,2212	0/0:17,0:16:45.15:0,45,1019	0/0:35,0:31:79.14:0,79,1756	0/0:26,0:26:69.24:0,69,1529	0/0:28,0:23:66.23:0,66,1522	0/0:29,0:28:81.19:0,81,1723	0/0:27,0:25:72.25:0,72,1626	0/0:11,0:10:30.10:0,30,646
chr10	39802360	.	C	CAA	25252.19	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=3.688;DP=559;FS=10.681;HRun=1;HaplotypeScore=105.2221;InbreedingCoeff=0.9882;MQ=82.48;MQ0=1;MQRankSum=-9.151;QD=48.28;ReadPosRankSum=5.446;VQSLOD=3.7741;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,19:20:48.16:927,48,0	1/1:1,6:7:21.03:368,21,0	0/0:23,0:23:48.30:0,48,857	0/0:13,0:13:33.51:0,34,477	1/1:3,36:35:96.24:1760,96,0	1/1:2,23:25:72.20:1353,72,0	1/1:1,26:29:54.19:1043,54,0	1/1:3,13:17:45.14:827,45,0	1/1:0,14:14:36.12:696,36,0	1/1:0,22:19:54.19:1034,54,0	1/1:0,21:17:48.12:889,48,0	1/1:0,17:17:51.17:959,51,0	1/1:0,16:16:48.16:927,48,0	1/1:1,21:21:60.17:1121,60,0	1/1:1,19:20:54.14:1005,54,0	1/1:0,13:13:36.12:695,36,0	1/1:2,18:20:45.15:869,45,0	1/1:0,9:9:24.04:425,24,0	1/1:1,11:13:36.11:657,36,0	1/1:3,26:28:80.70:1291,81,0	1/1:1,17:18:45.15:869,45,0	1/1:1,18:20:54.14:1005,54,0	1/1:0,20:20:57.20:1101,57,0	1/1:0,9:9:14.98:290,15,0	1/1:0,31:31:75.17:1373,75,0	1/1:0,26:26:75.24:1394,75,0	1/1:1,29:31:87.30:1678,87,0	1/1:0,14:13:36.12:696,36,0
chr10	39802669	.	C	CA	19449.14	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-4.002;DP=569;FS=0.000;HRun=3;HaplotypeScore=70.4193;InbreedingCoeff=0.9889;MQ=82.96;MQ0=0;MQRankSum=-9.265;QD=36.63;ReadPosRankSum=5.994;VQSLOD=4.8434;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,27:32:75.25:1045,75,0	1/1:1,7:8:21.07:287,21,0	0/0:25,0:25:58.75:0,59,810	0/0:13,0:13:36.09:0,36,413	1/1:1,36:37:99:1385,102,0	1/1:1,23:24:63.21:882,63,0	1/1:1,13:14:36.12:504,36,0	1/1:5,25:30:75.24:1033,75,0	1/1:1,15:16:45.15:630,45,0	1/1:1,25:26:75.25:1045,75,0	1/1:0,22:22:66.18:902,66,0	1/1:0,16:16:36.12:504,36,0	1/1:1,18:19:51.17:714,51,0	1/1:0,17:17:51.17:714,51,0	1/1:0,17:17:42.14:588,42,0	1/1:0,23:23:60.20:840,60,0	1/1:2,18:20:51.17:714,51,0	1/1:0,32:32:87.29:1218,87,0	1/1:0,13:13:39.13:546,39,0	1/1:1,29:30:81.18:1090,81,0	1/1:1,12:13:36.12:502,36,0	1/1:1,11:11:27.09:378,27,0	1/1:1,19:20:48.16:663,48,0	1/1:0,5:5:15.05:210,15,0	1/1:2,20:22:51.17:707,51,0	1/1:1,22:23:66.22:921,66,0	1/1:3,25:27:69.23:966,69,0	1/1:1,11:12:33.11:462,33,0
chr10	39804254	.	C	CGT	1944.98	PASS	AB=0.838;AC=23;AF=0.411;AN=56;BaseQRankSum=-1.624;DP=688;FS=2.452;HRun=0;HaplotypeScore=229.8623;InbreedingCoeff=-0.5614;MQ=43.65;MQ0=13;MQRankSum=-3.487;QD=3.75;ReadPosRankSum=-1.164;VQSLOD=2.5566;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:38,0:38:17.09:74,0,17	0/1:11,6:17:67.45:77,0,67	0/0:44,0:27:55.43:0,55,746	0/0:37,0:22:48.11:0,48,659	0/1:14,6:19:29.77:39,0,30	0/0:22,0:21:12.23:0,12,155	0/1:33,0:32:57.69:58,0,145	0/1:23,1:24:99:310,0,268	0/0:21,0:21:5.99:0,6,75	0/1:25,0:25:99:137,0,511	0/1:9,11:20:43.25:43,0,56	0/1:28,0:28:25.82:49,0,26	0/1:30,0:29:21.90:22,0,58	0/1:40,0:40:12.34:12,0,32	0/1:10,9:19:28.44:28,0,105	0/1:15,12:26:41.11:41,0,71	0/1:22,4:26:97.84:98,0,167	0/1:13,4:17:57.52:58,0,402	0/1:26,1:26:47.98:48,0,261	0/1:7,9:15:0:0,0,0	0/1:15,6:20:28.03:81,0,28	1/1:7,8:16:3.01:49,3,0	0/1:13,0:13:21.99:24,0,22	0/0:27,0:27:9.62:0,10,66	0/0:11,8:18:2.97:0,3,20	0/1:18,6:23:99:376,0,138	0/1:8,11:19:24.21:296,0,24	0/1:7,11:18:42.67:179,0,43
chr10	39805424	.	TAC	T	953.53	PASS	AB=0.963;AC=24;AF=0.429;AN=56;BaseQRankSum=6.702;DP=458;FS=50.838;HRun=0;HaplotypeScore=113.4850;InbreedingCoeff=-0.5100;MQ=74.35;MQ0=2;MQRankSum=-0.260;QD=2.37;ReadPosRankSum=7.731;VQSLOD=-0.2818;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:16,0:16:32.72:33,0,58	0/0:6,0:6:3:0,3,62	0/1:18,0:14:8.48:8,0,177	0/1:8,0:7:8.26:8,0,68	0/1:25,0:24:16.89:17,0,114	0/0:13,0:12:39.03:0,39,528	0/0:7,0:6:18.04:0,18,257	0/1:18,1:19:41.37:41,0,109	0/0:9,0:10:23.44:0,23,224	0/1:26,0:26:3.01:3,0,85	0/1:20,0:20:32.86:33,0,47	0/1:12,5:16:45.46:179,0,45	0/1:6,0:6:11.52:12,0,41	0/1:11,2:13:50.15:90,0,50	0/1:12,1:13:0.95:74,0,1	0/1:17,2:19:9.82:107,0,10	0/0:20,0:20:39.73:0,40,186	0/1:19,0:19:31.17:31,0,100	0/1:16,1:17:11.89:12,0,118	0/1:25,1:26:75.49:81,0,75	0/1:7,0:7:12.62:13,0,33	0/1:16,1:17:48.74:49,0,51	0/1:26,1:27:49.73:50,0,85	1/1:12,0:12:19:62,19,0	0/1:9,0:9:6.25:6,0,27	0/1:29,0:29:34.07:34,0,136	0/1:29,1:31:71.37:161,0,71	0/1:8,0:8:6.01:6,0,28
chr10	39805426	.	CAA	C	6844.41	PASS	AB=0.751;AC=45;AF=0.804;AN=56;BaseQRankSum=-0.363;DP=471;FS=5.164;HRun=14;HaplotypeScore=95.2386;InbreedingCoeff=0.6750;MQ=74.09;MQ0=2;MQRankSum=-0.474;QD=15.95;ReadPosRankSum=4.968;VQSLOD=4.2440;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,10:18:12.13:281,12,0	1/1:3,3:6:8.96:83,9,0	0/1:19,0:14:0.14:0,0,103	0/0:8,0:7:7.75:0,8,68	1/1:5,18:23:41.68:373,42,0	0/0:13,0:15:44.60:0,45,521	0/0:6,0:6:15.04:0,15,197	1/1:8,12:21:13.65:283,14,0	0/0:8,0:11:29.96:0,30,281	1/1:4,21:26:62.73:567,63,0	1/1:3,16:20:35.80:380,36,0	1/1:10,7:17:19.51:265,20,0	0/1:3,4:7:16.80:22,0,17	1/1:4,5:10:20.74:177,21,0	1/1:2,12:15:26.53:279,27,0	1/1:4,15:19:48.05:444,48,0	1/1:4,0:20:38.37:166,38,0	1/1:6,14:20:29.97:278,30,0	1/1:5,10:16:23.82:269,24,0	1/1:9,16:25:51.61:469,52,0	0/1:3,5:8:7.80:96,0,8	1/1:4,13:18:23.17:315,23,0	1/1:9,14:27:46.62:414,47,0	1/1:0,12:12:30.03:278,30,0	1/1:1,8:10:14.86:186,15,0	1/1:6,24:31:59.43:580,59,0	1/1:6,22:31:44.25:540,44,0	1/1:1,6:8:5.86:102,6,0
chr10	39808428	.	C	CATG	33793.46	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-6.445;DP=634;FS=3.062;HRun=0;HaplotypeScore=73.4343;InbreedingCoeff=0.9887;MQ=69.07;MQ0=0;MQRankSum=-7.588;QD=55.13;ReadPosRankSum=4.323;VQSLOD=6.6784;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,16:19:36.12:827,36,0	1/1:0,9:9:27.09:622,27,0	0/0:9,0:9:24.08:0,24,397	0/0:12,0:12:36.09:0,36,583	1/1:8,26:36:69.24:1581,69,0	1/1:5,25:30:66.23:1519,66,0	1/1:3,10:15:30.10:690,30,0	1/1:8,21:30:81.26:1774,81,0	1/1:0,17:19:39.13:888,39,0	1/1:5,34:40:99:2586,117,0	1/1:1,24:26:51.18:1174,51,0	1/1:0,24:26:69.24:1583,69,0	1/1:4,26:30:81.28:1859,81,0	1/1:5,28:34:78.27:1794,78,0	1/1:0,19:20:57.20:1297,57,0	1/1:1,19:21:57.20:1313,57,0	1/1:3,12:15:42.14:956,42,0	1/1:3,9:12:18.06:415,18,0	1/1:6,18:26:75.19:1553,75,0	1/1:2,31:34:90.31:2062,90,0	1/1:2,18:20:45.15:1037,45,0	1/1:2,20:23:57.20:1313,57,0	1/1:1,23:25:57.19:1313,57,0	1/1:1,6:7:18.06:415,18,0	1/1:4,20:26:57.20:1288,57,0	1/1:2,26:29:84.29:1885,84,0	1/1:5,25:30:66.23:1517,66,0	1/1:0,9:10:24.08:533,24,0
chr10	39808885	.	C	CAA	5506.54	PASS	AB=0.964;AC=53;AF=0.946;AN=56;BaseQRankSum=1.725;DP=591;FS=7.428;HRun=20;HaplotypeScore=209.6756;InbreedingCoeff=0.3287;MQ=64.40;MQ0=9;MQRankSum=0.204;QD=9.92;ReadPosRankSum=-0.596;VQSLOD=1.4530;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:23:19.36:157,19,0	1/1:5,0:5:6:52,6,0	0/1:49,0:23:16.79:17,0,40	0/0:35,0:15:2.75:0,3,15	1/1:30,0:30:45.74:378,46,0	1/1:17,8:25:19.25:167,19,0	1/1:19,0:19:28.82:244,29,0	1/1:24,0:24:36.48:291,36,0	1/1:19,0:19:31.72:250,32,0	1/1:24,0:24:29.41:227,29,0	1/1:25,0:24:36.86:315,37,0	1/1:15,0:15:17.99:154,18,0	1/1:16,0:16:12.47:105,12,0	1/1:22,0:22:47.50:407,47,0	1/1:14,0:14:20.99:182,21,0	1/1:26,0:26:38.91:324,39,0	1/1:17,0:16:30.01:272,30,0	1/1:6,0:6:5.96:44,6,0	1/1:12,0:12:17.99:154,18,0	1/1:21,0:21:29.80:252,30,0	1/1:8,0:8:3.43:20,3,0	1/1:11,0:11:17.68:145,18,0	1/1:10,0:10:15:131,15,0	1/1:15,0:15:12.32:104,12,0	1/1:20,0:20:37.12:292,37,0	1/1:29,0:29:42.88:350,43,0	1/1:29,0:28:44.32:345,44,0	1/1:34,0:33:27.94:130,28,0
chr10	39809229	.	AT	A	1717.77	PASS	AB=0.901;AC=29;AF=0.518;AN=56;BaseQRankSum=8.513;DP=469;FS=1.861;HRun=4;HaplotypeScore=124.8118;InbreedingCoeff=0.5510;MQ=64.80;MQ0=4;MQRankSum=-8.601;QD=8.38;ReadPosRankSum=-2.999;VQSLOD=-0.2127;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:21,1:22:19.20:282,19,0	0/0:7,1:8:9.93:0,10,26	0/0:27,0:15:14.70:0,15,296	0/0:36,1:18:10.05:0,10,265	0/1:17,3:19:8.65:96,0,9	1/1:18,2:20:31.30:235,31,0	1/1:3,0:3:7.21:25,7,0	0/0:32,0:32:90.28:0,90,1226	1/1:5,2:7:17.37:137,17,0	0/1:16,0:15:19.27:53,0,19	1/1:11,2:13:1.99:109,2,0	1/1:5,1:6:2.40:56,2,0	1/1:10,0:11:26.20:148,26,0	1/1:7,2:9:23.03:146,23,0	0/1:14,4:18:2.05:104,0,2	0/1:10,1:11:5.88:61,0,6	0/1:16,2:16:10.27:105,0,10	1/1:10,0:10:1.84:71,2,0	0/0:34,0:33:96.29:0,96,1296	0/0:19,0:19:57.16:0,57,740	0/0:10,0:10:21.07:0,21,292	1/1:2,1:3:6.46:58,6,0	1/1:12,0:13:11.47:192,11,0	1/1:5,0:3:4.25:34,4,0	0/0:25,0:25:72.24:0,72,989	0/0:27,0:27:71.04:0,71,954	0/0:31,0:31:69.46:0,69,1151	0/0:14,0:14:42.11:0,42,566
chr10	39809230	.	T	TTTA	8433.71	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=11.414;DP=467;FS=2.692;HRun=0;HaplotypeScore=120.8999;InbreedingCoeff=0.8741;MQ=64.72;MQ0=4;MQRankSum=-12.065;QD=39.78;ReadPosRankSum=1.788;VQSLOD=6.1056;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:22:24.05:512,24,0	1/1:1,7:8:21.07:483,21,0	0/0:25,0:15:7.62:0,8,325	0/0:37,0:18:0.86:0,1,302	1/1:8,13:20:46.54:986,47,0	1/1:11,8:19:35.12:792,35,0	1/1:2,1:3:8.35:92,8,0	0/0:32,0:32:90.29:0,90,1407	1/1:4,3:7:18.06:361,18,0	1/1:4,13:16:45.11:944,45,0	1/1:8,5:13:30.08:519,30,0	1/1:6,0:6:8.69:84,9,0	1/1:11,0:11:27.54:334,28,0	1/1:8,1:9:20.72:246,21,0	1/1:9,9:18:41.95:769,42,0	1/1:3,8:11:29.74:648,30,0	1/1:5,12:15:22.22:715,22,0	1/1:2,8:10:27.09:573,27,0	0/0:35,0:34:96.32:0,96,1524	0/0:19,0:19:57.16:0,57,859	0/0:10,0:10:21.07:0,21,338	1/1:2,1:3:9:119,9,0	1/1:13,0:13:17.24:241,17,0	1/1:4,0:3:4.50:16,4,0	0/0:24,0:24:72.24:0,72,1141	0/0:25,1:26:3.20:0,3,1054	0/0:31,0:31:69.44:0,69,1354	0/0:14,0:14:42.14:0,42,687
chr10	39809231	.	T	TTA	4719.93	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=12.832;DP=468;FS=0.371;HRun=0;HaplotypeScore=126.4843;InbreedingCoeff=0.9249;MQ=65.56;MQ0=4;MQRankSum=-11.488;QD=22.58;ReadPosRankSum=2.493;VQSLOD=5.5985;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:12,11:23:33.51:794,34,0	1/1:8,0:8:21:182,21,0	0/0:29,0:16:13.65:0,14,335	0/0:37,0:18:9.42:0,9,291	1/1:21,0:20:28.32:378,28,0	1/1:14,0:18:26.55:332,27,0	1/1:3,0:3:7.97:53,8,0	0/0:32,0:32:90.29:0,90,1321	1/1:8,0:8:17.41:131,17,0	1/1:18,0:17:29.46:355,29,0	1/1:10,0:10:24.24:189,24,0	1/1:3,3:6:11.53:142,12,0	1/1:4,7:11:29.95:459,30,0	1/1:6,3:9:26.09:336,26,0	1/1:16,0:16:37.42:307,37,0	1/1:11,0:11:19.44:248,19,0	1/1:17,0:15:11.67:242,12,0	1/1:10,0:10:23.88:202,24,0	0/0:36,0:35:99:0,99,1456	0/0:19,0:19:57.18:0,57,827	0/0:8,0:8:21.07:0,21,320	1/1:3,0:3:5.40:33,5,0	1/1:9,4:13:23.47:322,23,0	1/1:3,1:3:3.99:15,4,0	0/0:26,0:26:72.72:0,73,1089	0/0:26,0:26:46.27:0,46,1010	0/0:31,0:31:89.05:0,89,1277	0/0:15,0:15:42.14:0,42,643
chr10	39809232	.	TTA	T	780.14	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=9.199;DP=466;FS=0.000;HRun=0;HaplotypeScore=134.8629;InbreedingCoeff=0.6072;MQ=65.52;MQ0=4;MQRankSum=-6.945;QD=5.03;ReadPosRankSum=-3.447;VQSLOD=2.0181;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,4:23:36.18:249,36,0	0/0:8,0:8:20.52:0,21,148	0/0:29,0:16:19.23:0,19,292	0/0:36,0:18:21.72:0,22,294	0/1:20,0:19:24.76:25,0,150	1/1:17,0:18:18.77:150,19,0	0/1:1,0:3:4.64:17,0,5	0/0:30,0:30:87.23:0,87,1314	1/1:8,0:8:5.72:96,6,0	0/0:18,0:17:31.85:0,32,265	0/1:11,0:11:0.64:1,0,91	1/1:5,0:5:7.31:36,7,0	1/1:11,0:11:13.87:63,14,0	1/1:8,1:9:14.75:100,15,0	0/1:16,0:16:30.96:31,0,137	0/1:11,0:11:2.64:3,0,102	0/0:17,0:15:12.35:0,12,138	0/0:10,0:10:11.76:0,12,107	0/0:36,0:35:93.26:0,93,1505	0/0:19,0:19:57.11:0,57,899	0/0:8,0:8:21.07:0,21,356	1/1:3,0:3:2.44:6,2,0	1/1:12,1:13:24.67:180,25,0	1/1:4,0:3:2.84:14,3,0	0/0:26,0:26:73.52:0,74,1131	0/0:25,0:25:72.21:0,72,1139	0/0:32,0:32:72.20:0,72,1271	0/0:16,0:16:44.96:0,45,669
chr10	39809234	.	A	AT	924.59	PASS	AC=18;AF=0.333;AN=54;BaseQRankSum=9.117;DP=464;FS=6.178;HRun=8;HaplotypeScore=129.0355;InbreedingCoeff=0.8889;MQ=63.17;MQ0=4;MQRankSum=-8.427;QD=10.16;ReadPosRankSum=-2.274;VQSLOD=1.3761;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:21:32.55:200,33,0	0/0:8,0:8:20.70:0,21,135	0/0:29,0:15:22.05:0,22,167	0/0:37,0:17:11.38:0,11,113	0/0:21,0:20:2.65:0,3,117	1/1:10,7:17:39.99:306,40,0	1/1:4,0:4:8.97:46,9,0	0/0:31,0:31:65.89:0,66,604	1/1:6,2:8:16.37:89,16,0	0/0:17,0:16:41.23:0,41,281	0/0:11,0:11:14.60:0,15,117	1/1:5,0:5:11.51:73,12,0	1/1:11,0:11:26.49:134,26,0	1/1:8,0:8:22.26:138,22,0	0/0:17,0:17:3.98:0,4,112	0/0:10,0:10:20.48:0,20,123	0/0:17,0:15:17.37:0,17,142	0/0:9,0:9:19.16:0,19,110	0/0:33,1:33:93.03:0,93,845	0/0:18,0:18:51.01:0,51,462	0/0:8,0:8:21.01:0,21,192	1/1:3,0:3:3.19:20,3,0	1/1:14,0:14:20.11:118,20,0	./.	0/0:27,0:27:68.52:0,69,612	0/0:27,0:27:65.97:0,66,596	0/0:31,0:31:62.85:0,63,589	0/0:16,0:16:42.02:0,42,383
chr10	39809236	.	T	TTG	1549.02	PASS	AB=0.968;AC=19;AF=0.339;AN=56;BaseQRankSum=9.293;DP=478;FS=23.098;HRun=0;HaplotypeScore=139.9241;InbreedingCoeff=0.1775;MQ=61.01;MQ0=4;MQRankSum=-9.802;QD=8.28;ReadPosRankSum=-1.399;VQSLOD=1.7287;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:22:11.11:246,0,11	0/0:9,0:9:5.67:0,6,191	0/0:30,0:15:34.30:0,34,302	0/0:38,0:17:24.56:0,25,262	0/1:22,1:22:99:134,0,123	0/1:16,0:16:4.21:171,0,4	0/1:4,0:4:1.32:1,0,4	0/0:28,0:28:78.10:0,78,1119	1/1:9,0:9:8.31:54,8,0	0/0:17,0:16:18.60:0,19,336	0/1:11,0:11:87.82:100,0,88	0/1:5,0:6:2.10:83,0,2	1/1:13,0:13:21.87:225,22,0	1/1:8,0:9:19.01:120,19,0	0/1:17,1:18:99:165,0,163	0/1:11,0:10:38.59:39,0,135	0/1:17,1:16:93.25:93,0,135	0/1:10,0:10:48.60:49,0,95	0/0:34,0:33:99:0,99,1471	0/0:19,0:19:51.17:0,51,780	0/0:8,0:8:21.07:0,21,321	1/1:2,1:3:9.03:140,9,0	0/1:13,0:13:24.36:103,0,24	0/0:4,0:3:2.97:0,3,20	0/0:27,0:27:78.21:0,78,1121	0/0:28,0:28:75.23:0,75,1076	0/0:31,0:31:78.67:0,79,1127	0/0:17,0:17:45.14:0,45,656
chr10	39809246	.	TTTTG	T	1153.13	PASS	AB=0.969;AC=20;AF=0.357;AN=56;BaseQRankSum=6.081;DP=461;FS=5.465;HRun=0;HaplotypeScore=150.4360;InbreedingCoeff=-0.1375;MQ=58.61;MQ0=4;MQRankSum=-7.623;QD=4.80;ReadPosRankSum=-2.003;VQSLOD=2.0627;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:19,1:20:99:238,0,162	0/1:8,0:8:29.06:29,0,132	0/1:36,0:18:0.23:0,0,418	0/1:33,0:14:19.15:19,0,120	0/1:22,0:21:99:119,0,206	0/0:16,0:16:16.74:0,17,289	0/0:3,0:3:8.58:0,9,48	0/0:28,0:28:78.03:0,78,1514	1/1:9,0:9:3.21:36,3,0	0/0:15,0:14:11.54:0,12,221	0/1:11,1:12:99:163,0,139	0/1:5,0:5:13.39:13,0,85	0/1:13,2:15:99:138,0,119	0/1:9,1:10:94.50:94,0,164	0/1:16,0:16:99:137,0,235	0/1:10,0:9:1.37:1,0,181	0/1:15,0:14:28.61:29,0,156	0/1:8,1:9:69.90:136,0,70	0/0:34,0:33:84:0,84,1650	0/0:19,0:19:57.11:0,57,1265	0/0:10,0:10:27.09:0,27,609	1/1:3,0:3:7.20:45,7,0	0/1:12,0:11:69.21:94,0,69	1/1:5,0:3:2.98:21,3,0	0/0:26,0:26:78.05:0,78,1564	0/0:28,0:28:81.21:0,81,1732	0/0:26,0:26:71.92:0,72,1362	0/0:16,0:16:48.16:0,48,1084
chr10	39809247	.	TTTG	T	1412.17	PASS	AB=0.910;AC=19;AF=0.339;AN=56;BaseQRankSum=4.991;DP=463;FS=6.435;HRun=0;HaplotypeScore=143.0293;InbreedingCoeff=-0.1962;MQ=58.51;MQ0=4;MQRankSum=-7.800;QD=5.84;ReadPosRankSum=-2.904;VQSLOD=1.6999;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:20,0:20:99:123,0,150	0/1:8,0:8:0.61:1,0,143	0/1:36,0:18:5.12:5,0,339	0/1:32,0:14:3.67:4,0,134	0/1:16,6:21:99:196,0,133	0/0:16,0:16:27:0,27,232	0/0:3,0:3:8.94:0,9,69	0/0:28,0:28:78.02:0,78,1266	0/1:9,0:9:7.10:7,0,26	0/0:15,0:14:30.56:0,31,233	0/1:12,0:12:65.19:65,0,130	0/1:3,2:5:56.17:75,0,56	0/1:15,0:15:87.22:87,0,121	0/1:10,0:10:48.57:49,0,125	0/1:11,5:16:99:314,0,132	0/1:8,2:9:64.13:64,0,70	0/1:12,3:14:68.19:81,0,68	0/1:8,0:9:60.58:61,0,81	0/0:33,0:32:83.99:0,84,1385	0/0:19,0:19:57.11:0,57,1040	0/0:10,0:10:27.09:0,27,498	1/1:3,1:4:9.03:129,9,0	0/1:8,5:12:45.31:261,0,45	1/1:3,2:3:3.01:50,3,0	0/0:26,0:26:78.03:0,78,1294	0/0:29,0:29:84.20:0,84,1464	0/0:26,0:26:71.88:0,72,1117	0/0:16,0:16:48.16:0,48,877
chr10	39809250	.	G	GGTT	6438.96	PASS	AB=1.000;AC=37;AF=0.661;AN=56;BaseQRankSum=14.273;DP=459;FS=15.845;HRun=0;HaplotypeScore=127.7052;InbreedingCoeff=0.8212;MQ=58.26;MQ0=4;MQRankSum=-13.035;QD=26.72;ReadPosRankSum=0.786;VQSLOD=4.1747;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,12:20:54.03:905,54,0	1/1:1,6:7:21.06:457,21,0	0/0:36,0:18:11.55:0,12,357	0/1:33,0:14:65.18:65,0,95	1/1:12,1:19:49.70:618,50,0	1/1:17,0:17:16.56:223,17,0	1/1:6,0:6:8.55:43,9,0	0/0:28,0:28:76.05:0,76,1117	1/1:9,0:9:0.34:70,0,0	1/1:4,8:12:32.91:549,33,0	1/1:6,6:13:35.67:530,36,0	1/1:5,0:5:11.60:101,12,0	1/1:10,6:16:33.62:531,34,0	1/1:8,2:11:19.05:276,19,0	1/1:11,0:16:44.78:513,45,0	1/1:3,0:7:21.03:341,21,0	1/1:9,1:13:29.89:401,30,0	1/1:5,4:9:21.16:407,21,0	0/0:29,0:28:84.13:0,84,1224	0/0:19,0:19:57.07:0,57,930	0/0:9,0:10:26.98:0,27,449	1/1:2,0:4:9.03:147,9,0	1/1:10,0:12:24.21:240,24,0	1/1:5,0:3:2.98:21,3,0	0/0:24,0:25:75:0,75,1158	0/0:29,1:30:12.02:0,12,1236	0/0:23,0:24:69.09:0,69,985	0/0:13,0:17:50.72:0,51,730
chr10	39809287	.	TGC	T	417.11	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=6.715;DP=409;FS=15.462;HRun=0;HaplotypeScore=107.2565;InbreedingCoeff=0.8501;MQ=49.32;MQ0=16;MQRankSum=-6.215;QD=13.90;ReadPosRankSum=3.714;VQSLOD=2.6777;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:48.16:0,48,888	0/0:9,0:9:27.09:0,27,505	0/0:19,0:4:9.03:0,9,132	0/0:20,0:1:3.01:0,3,56	0/0:20,0:20:51.17:0,51,930	1/1:5,7:12:21.03:216,21,0	1/1:3,6:9:17.95:162,18,0	0/0:27,0:24:69.24:0,69,1279	1/1:2,7:9:18.03:178,18,0	0/0:10,0:10:24.08:0,24,440	0/0:16,0:16:45.15:0,45,830	0/0:1,0:1:3.01:0,3,56	0/0:8,0:8:24.08:0,24,447	0/0:10,0:10:30.10:0,30,551	0/0:10,0:10:27.09:0,27,499	0/0:6,0:5:12.04:0,12,224	0/0:16,0:15:36.12:0,36,672	0/0:10,0:10:30.10:0,30,542	0/0:20,0:18:48.16:0,48,889	0/0:16,0:16:48.16:0,48,898	0/0:16,0:16:48.16:0,48,898	0/0:9,0:9:24.08:0,24,448	0/0:11,0:10:27.09:0,27,495	0/0:11,0:9:27.09:0,27,504	0/0:23,0:23:66.23:0,66,1227	0/0:26,0:26:75.26:0,75,1391	0/0:17,0:17:48.06:0,48,892	0/0:25,0:25:75.26:0,75,1386
chr10	39809293	.	TGCTA	T	695.85	PASS	AB=0.552;AC=4;AF=0.071;AN=56;BaseQRankSum=7.113;DP=410;FS=15.949;HRun=0;HaplotypeScore=118.0082;InbreedingCoeff=0.6286;MQ=50.68;MQ0=15;MQRankSum=-5.137;QD=27.83;ReadPosRankSum=2.050;VQSLOD=2.7966;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:54.19:0,54,1459	0/0:8,0:8:24.08:0,24,670	0/0:13,0:2:6.01:0,6,104	0/0:25,0:4:8.70:0,9,100	0/0:22,0:22:54.17:0,54,1409	1/1:2,7:8:25.66:316,26,0	0/1:2,6:8:0.04:245,0,0	0/0:28,0:25:72.24:0,72,1901	0/1:1,7:8:2.98:250,0,3	0/0:11,0:11:30.10:0,30,776	0/0:16,0:16:39.13:0,39,1072	0/0:1,0:1:3.01:0,3,84	0/0:10,0:10:30.09:0,30,744	0/0:12,0:12:33.11:0,33,890	0/0:10,0:10:30.10:0,30,834	0/0:8,0:7:21.06:0,21,510	0/0:15,0:14:39.13:0,39,1061	0/0:11,0:11:30.10:0,30,773	0/0:18,0:16:48.15:0,48,1232	0/0:19,0:19:54.17:0,54,1415	0/0:17,0:17:51.16:0,51,1364	0/0:10,0:10:27.08:0,27,694	0/0:12,0:11:27.08:0,27,693	0/0:12,0:10:30.10:0,30,833	0/0:21,0:21:63.22:0,63,1743	0/0:24,0:24:69.24:0,69,1900	0/0:17,0:17:48.16:0,48,1341	0/0:22,0:22:66.23:0,66,1803
chr10	39809324	.	T	TC	9278.90	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=10.662;DP=464;FS=39.985;HRun=3;HaplotypeScore=84.1272;InbreedingCoeff=0.9872;MQ=64.03;MQ0=8;MQRankSum=-2.229;QD=35.15;ReadPosRankSum=3.448;VQSLOD=2.1915;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,28:28:72.24:1007,72,0	1/1:0,10:10:30.10:420,30,0	0/0:15,0:12:33.94:0,34,370	0/0:22,0:15:15.99:0,16,289	1/1:4,21:24:56.88:793,57,0	1/1:1,14:14:42.14:583,42,0	1/1:4,9:13:27.09:377,27,0	0/0:22,0:21:57.14:0,57,669	1/1:1,11:12:30.10:419,30,0	1/1:1,16:17:48.13:636,48,0	1/1:2,20:22:60.20:835,60,0	1/1:0,4:4:9.03:126,9,0	1/1:0,11:11:33.11:462,33,0	1/1:1,12:13:36.12:503,36,0	1/1:2,11:13:33.11:462,33,0	1/1:0,12:11:30.06:398,30,0	1/1:1,16:16:39.13:546,39,0	1/1:2,10:12:30.10:420,30,0	0/0:23,0:22:60.14:0,60,703	0/0:14,0:14:36.08:0,36,409	0/0:21,0:21:63.18:0,63,743	1/1:0,9:9:24.08:327,24,0	1/1:1,12:12:27.09:378,27,0	1/1:1,17:16:42.14:588,42,0	0/0:22,0:22:57.15:0,57,662	0/0:21,1:22:18.25:0,18,642	0/0:17,0:17:48.13:0,48,564	0/0:21,0:21:63.19:0,63,755
chr10	39809978	.	T	TGG	1310.88	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-2.566;DP=546;FS=3.017;HRun=8;HaplotypeScore=82.8770;InbreedingCoeff=0.9460;MQ=83.49;MQ0=1;MQRankSum=-2.964;QD=13.80;ReadPosRankSum=0.656;VQSLOD=1.1168;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:18,1:22:12:127,12,0	0/0:12,0:12:33.07:0,33,358	0/0:31,0:31:65.92:0,66,723	0/0:16,0:16:29.09:0,29,347	0/0:34,0:34:90.20:0,90,993	0/0:16,0:16:39.09:0,39,435	0/0:18,0:18:45.12:0,45,502	0/0:28,0:28:54.09:0,54,587	0/0:21,0:21:51.06:0,51,541	0/0:24,0:24:54.11:0,54,583	0/0:19,0:19:42.10:0,42,468	1/1:3,13:19:34.61:455,35,0	1/1:10,1:11:6.02:82,6,0	1/1:13,0:16:9.03:109,9,0	0/0:25,0:25:66.17:0,66,736	0/0:19,0:19:54.14:0,54,602	0/0:23,0:22:57.14:0,57,635	0/0:10,0:10:24.03:0,24,255	0/0:16,0:16:39.09:0,39,435	0/0:18,0:18:54.15:0,54,601	0/0:30,0:30:78.15:0,78,850	0/0:16,0:16:39.09:0,39,435	1/1:3,10:13:24.08:381,24,0	1/1:4,10:14:21.07:333,21,0	0/0:18,0:17:33.05:0,33,358	0/0:25,0:25:54.08:0,54,582	0/0:25,0:26:65.81:0,66,671	0/0:6,0:6:9.02:0,9,100
chr10	39810257	.	GTCC	G	9821.56	PASS	AB=0.535;AC=21;AF=0.375;AN=56;BaseQRankSum=19.784;DP=655;FS=0.000;HRun=0;HaplotypeScore=138.7134;InbreedingCoeff=0.9279;MQ=79.52;MQ0=0;MQRankSum=-11.886;QD=41.27;ReadPosRankSum=1.368;VQSLOD=5.9145;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,31:33:81.28:1348,81,0	0/0:11,0:11:30.10:0,30,674	0/0:39,0:39:99:0,111,2488	0/0:18,0:18:49.98:0,50,1101	0/0:27,0:27:81.27:0,81,1828	0/0:21,0:21:60.21:0,60,1384	0/0:29,0:29:87.29:0,87,1962	1/1:6,17:23:51.16:824,51,0	0/0:25,0:25:72.25:0,72,1635	0/0:27,0:27:77.81:0,78,1773	0/0:25,0:25:71.27:0,71,1640	0/0:23,0:23:69.24:0,69,1540	1/1:2,27:29:81.28:1347,81,0	0/1:3,20:23:12.01:842,0,12	0/0:24,0:24:69.24:0,69,1591	0/0:18,0:18:54.19:0,54,1246	0/0:23,0:23:66.20:0,66,1474	0/0:27,0:27:81.28:0,81,1862	1/1:2,10:12:30.10:500,30,0	1/1:3,20:23:54.18:898,54,0	1/1:4,17:21:39.13:649,39,0	0/0:28,0:28:84.29:0,84,1881	0/0:29,0:29:84.27:0,84,1872	0/0:23,0:23:69.24:0,69,1587	1/1:0,17:17:48.16:799,48,0	1/1:0,19:19:57.13:916,57,0	1/1:2,27:29:78.27:1298,78,0	1/1:0,9:9:24.08:400,24,0
chr10	39811888	.	AT	A	1254.87	PASS	AB=0.809;AC=25;AF=0.446;AN=56;BaseQRankSum=1.999;DP=446;FS=24.766;HRun=16;HaplotypeScore=71.2848;InbreedingCoeff=0.5109;MQ=68.02;MQ0=14;MQRankSum=-2.353;QD=4.58;ReadPosRankSum=1.404;VQSLOD=0.2734;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:25,4:28:35.53:36,0,262	0/0:3,0:3:8.99:0,9,76	0/1:15,1:10:2.26:2,0,55	0/1:17,0:12:7.16:19,0,7	0/0:21,0:22:25.27:0,25,278	0/0:10,0:15:26.15:0,26,165	0/0:8,0:11:23.46:0,23,161	1/1:11,16:28:40.83:250,41,0	0/0:10,1:11:2.85:0,3,114	0/0:10,0:11:11.79:0,12,83	0/0:10,1:11:5.38:0,5,92	1/1:4,0:16:24.38:70,24,0	0/0:12,0:13:22.37:0,22,152	0/0:14,0:12:14.79:0,15,106	0/0:15,1:16:32.91:0,33,269	0/1:7,2:9:12.08:12,0,121	0/0:23,2:22:2.49:0,2,248	0/0:14,0:15:32.72:0,33,249	1/1:12,3:15:19.63:112,20,0	1/1:6,9:16:25.52:149,26,0	1/1:5,9:16:24.36:137,24,0	0/1:8,1:8:3.03:3,0,83	1/1:7,0:11:10.14:29,10,0	1/1:8,0:20:24.48:71,24,0	0/1:1,6:7:4.53:87,0,5	1/1:10,15:26:38.58:224,39,0	1/1:8,13:21:26.26:161,26,0	0/1:3,8:10:4.54:87,0,5
chr10	39811916	.	T	TTC	1534.85	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=2.736;DP=431;FS=0.000;HRun=0;HaplotypeScore=70.1373;InbreedingCoeff=0.8632;MQ=44.79;MQ0=31;MQRankSum=-6.129;QD=28.42;ReadPosRankSum=3.685;VQSLOD=4.9995;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:22:55.98:0,56,786	0/0:5,0:4:12:0,12,136	0/0:1,0:1:2.99:0,3,23	0/0:4,0:1:2.98:0,3,21	0/0:15,0:14:30.09:0,30,445	0/0:17,0:15:39.05:0,39,541	0/0:15,0:13:29.72:0,30,398	0/0:15,0:15:45.06:0,45,621	0/0:16,0:14:42.13:0,42,589	0/0:15,0:15:35.75:0,36,465	0/0:16,0:14:39.06:0,39,492	1/1:1,20:23:51.17:914,51,0	0/0:9,0:8:21.04:0,21,266	0/0:16,0:15:32.97:0,33,357	0/0:16,0:16:39.02:0,39,535	0/0:14,0:12:33.08:0,33,438	0/0:23,0:19:45.07:0,45,611	0/0:16,0:15:36.04:0,36,484	0/0:15,0:14:33.58:0,34,368	0/0:12,0:12:30.04:0,30,399	0/0:17,0:16:45.01:0,45,614	0/0:18,0:17:38.99:0,39,458	1/1:1,6:7:12.51:229,13,0	1/1:7,15:16:30.10:530,30,0	0/0:16,0:15:42.14:0,42,617	0/0:20,0:18:51.17:0,51,758	0/0:31,0:29:69.05:0,69,871	0/0:9,0:8:18.06:0,18,269
chr10	39813699	.	CT	C	13537.06	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=17.092;DP=676;FS=2.076;HRun=2;HaplotypeScore=111.6417;InbreedingCoeff=0.9992;MQ=64.79;MQ0=1;MQRankSum=-0.260;QD=32.70;ReadPosRankSum=2.170;VQSLOD=4.6260;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,31:32:93.24:1100,93,0	0/0:11,0:11:33.10:0,33,474	0/0:13,0:10:29.89:0,30,348	0/0:36,0:30:22.44:0,22,723	0/0:22,0:22:63.20:0,63,925	1/1:0,18:18:54.17:648,54,0	1/1:3,15:18:45.12:527,45,0	1/1:2,26:28:75.17:859,75,0	1/1:0,33:33:93.29:1116,93,0	0/0:31,0:31:90.29:0,90,1315	0/0:19,0:19:57.18:0,57,836	1/1:1,22:23:57.17:684,57,0	1/1:1,29:29:84.26:1004,84,0	1/1:4,25:29:72.22:864,72,0	0/0:32,0:32:93.30:0,93,1374	0/0:28,1:29:51.27:0,51,1186	0/0:23,0:22:69.23:0,69,1033	0/0:20,1:21:28.99:0,29,840	1/1:2,12:13:33.10:396,33,0	1/1:1,17:18:48.15:575,48,0	1/1:1,29:30:87.27:1042,87,0	0/0:24,0:24:72.24:0,72,1078	1/1:1,10:11:33.09:387,33,0	1/1:0,40:40:99:1313,111,0	1/1:0,27:27:78.24:935,78,0	1/1:0,11:11:33.10:396,33,0	1/1:1,40:41:99:1295,108,0	1/1:0,11:11:33.10:396,33,0
chr10	39813845	.	GA	G	3748.62	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=12.213;DP=649;FS=2.112;HRun=7;HaplotypeScore=67.3349;InbreedingCoeff=0.8996;MQ=74.58;MQ0=0;MQRankSum=-0.451;QD=21.92;ReadPosRankSum=4.795;VQSLOD=3.6005;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,27:33:87.14:876,87,0	0/0:9,0:9:27.08:0,27,327	0/0:23,0:21:47.88:0,48,533	0/1:11,0:11:36.16:36,0,113	0/0:26,0:26:69.20:0,69,841	1/1:4,25:29:72.16:734,72,0	1/1:3,21:24:54.12:551,54,0	0/0:33,0:32:72.15:0,72,861	1/1:2,23:25:51.59:521,52,0	0/0:15,0:15:45.14:0,45,566	0/0:19,0:19:48.05:0,48,555	0/0:19,0:19:48.14:0,48,591	1/1:1,20:21:41.99:428,42,0	1/1:5,23:28:58.89:603,59,0	0/0:22,0:22:63.20:0,63,792	0/0:25,1:26:41.60:0,42,813	0/0:35,0:35:90.25:0,90,1114	0/0:23,0:23:66.17:0,66,809	0/0:20,0:20:57.14:0,57,689	0/0:32,0:32:87.17:0,87,1012	0/0:15,0:15:45.13:0,45,551	0/0:20,0:20:51.16:0,51,640	0/0:23,0:22:62.94:0,63,727	0/0:19,0:19:51.16:0,51,636	0/0:19,0:19:51.16:0,51,639	0/0:30,0:30:87.23:0,87,1061	0/0:33,0:33:96.30:0,96,1194	0/0:17,0:17:51.16:0,51,641
chr10	39818921	.	A	AAT	4234.15	PASS	AB=0.519;AC=5;AF=0.089;AN=56;BaseQRankSum=-10.450;DP=671;FS=9.505;HRun=0;HaplotypeScore=79.8623;InbreedingCoeff=0.7779;MQ=87.79;MQ0=0;MQRankSum=-3.211;QD=53.60;ReadPosRankSum=3.038;VQSLOD=5.2728;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,120,1764	0/0:19,0:19:54.18:0,54,827	0/0:29,0:29:81.26:0,81,1168	0/0:18,0:18:48.14:0,48,648	0/0:30,0:30:90.31:0,90,1373	0/0:22,0:22:63.21:0,63,965	0/0:18,0:18:54.18:0,54,827	0/0:15,0:15:39.12:0,39,561	0/0:15,0:15:45.14:0,45,667	0/0:35,0:35:99:0,102,1464	0/0:19,0:19:57.19:0,57,862	1/1:0,28:28:78.27:1503,78,0	0/0:20,0:20:60.20:0,60,901	0/0:21,0:21:57.19:0,57,873	0/0:20,0:20:54.18:0,54,827	0/0:18,0:18:54.17:0,54,808	0/0:27,0:27:81.28:0,81,1240	0/0:21,1:22:5.35:0,5,861	0/0:19,0:19:54.17:0,54,805	0/0:34,0:34:99:0,99,1476	0/0:27,0:27:81.26:0,81,1212	0/0:23,0:23:69.23:0,69,1057	1/1:0,23:23:69.24:1309,69,0	0/1:2,26:28:7.61:1422,0,8	0/0:25,0:25:69.18:0,69,990	0/0:27,0:27:81.27:0,81,1221	0/0:37,0:37:99:0,108,1652	0/0:12,0:12:33.07:0,33,474
chr10	39819243	.	CACCCCTG	C	11570.94	PASS	AB=0.980;AC=22;AF=0.393;AN=56;BaseQRankSum=17.366;DP=634;FS=0.993;HRun=0;HaplotypeScore=207.5001;InbreedingCoeff=-0.0020;MQ=71.51;MQ0=0;MQRankSum=-17.752;QD=29.82;ReadPosRankSum=3.943;VQSLOD=4.6257;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:29:69.77:886,0,70	0/0:12,0:12:36.10:0,36,1205	0/0:15,0:15:40.94:0,41,1376	0/0:19,0:19:47.64:0,48,1560	0/0:22,0:22:66.23:0,66,2625	0/1:22,0:22:74.68:722,0,75	0/1:31,0:31:99:604,0,198	0/1:26,0:26:99:530,0,249	0/1:22,0:23:93.72:742,0,94	0/0:22,0:22:63.21:0,63,2404	0/0:9,0:9:27.08:0,27,978	1/1:27,1:28:36.12:1265,36,0	0/1:27,0:27:23.68:1038,0,24	0/1:29,2:31:99:969,0,122	0/0:41,0:41:99:0,123,4674	0/0:33,0:33:99:0,99,3647	0/0:21,0:21:63.12:0,63,2174	0/0:30,0:30:90.27:0,90,3454	0/1:21,0:21:77.78:494,0,78	0/1:16,2:18:16.20:532,0,16	0/1:35,0:35:99:341,0,162	0/0:22,0:22:60.26:0,60,2209	1/1:16,1:17:0.20:658,0,0	0/1:24,0:24:99:405,0,100	1/1:19,1:20:3.21:857,3,0	0/1:24,1:24:11.75:1043,0,12	1/1:9,0:9:6.08:376,6,0	1/1:2,0:2:6.02:109,6,0
chr10	39819244	.	ACCCCTGC	A	16249.61	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=8.712;DP=629;FS=0.340;HRun=0;HaplotypeScore=192.4332;InbreedingCoeff=0.9832;MQ=72.26;MQ0=0;MQRankSum=-18.077;QD=42.65;ReadPosRankSum=-0.787;VQSLOD=4.4620;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,22:29:51.17:1254,51,0	0/0:13,0:13:33.11:0,33,1173	0/0:16,0:16:40.69:0,41,1274	0/0:19,0:19:45.15:0,45,1367	0/0:23,0:23:69.22:0,69,2538	1/1:6,16:22:42.14:1036,42,0	1/1:8,22:30:36.12:887,36,0	1/1:12,14:26:34.35:834,34,0	1/1:4,19:23:42.14:1036,42,0	0/0:23,0:23:63.22:0,63,2318	0/0:9,0:9:24.08:0,24,878	1/1:3,24:28:69.23:1661,69,0	1/1:4,23:27:57.19:1405,57,0	1/1:10,21:31:54.18:1331,54,0	0/0:41,0:41:99:0,117,4339	0/0:32,0:32:90.31:0,90,3367	0/0:21,0:21:51.18:0,51,1929	0/0:29,0:29:87.28:0,87,3174	1/1:9,12:21:36.08:765,36,0	1/1:3,15:18:30.10:713,30,0	1/1:13,19:32:21.54:519,22,0	0/0:22,0:22:57.20:0,57,2025	1/1:4,13:17:36.12:886,36,0	1/1:6,17:23:24.08:592,24,0	1/1:1,19:20:48.16:1184,48,0	1/1:2,21:23:60.20:1481,60,0	1/1:1,8:9:21.07:518,21,0	1/1:0,2:2:6.02:148,6,0
chr10	39820376	.	T	TA	5325.18	PASS	AB=0.559;AC=27;AF=0.500;AN=54;BaseQRankSum=1.794;DP=457;FS=1.192;HRun=6;HaplotypeScore=77.2747;InbreedingCoeff=0.8995;MQ=63.12;MQ0=1;MQRankSum=-0.083;QD=21.22;ReadPosRankSum=-0.607;VQSLOD=3.9656;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,0:27:62.84:319,63,0	0/0:5,0:5:12.01:0,12,115	0/0:4,0:4:2.84:0,3,14	./.	0/0:26,0:26:72.12:0,72,719	1/1:1,0:19:45.45:232,45,0	1/1:1,0:9:22.79:116,23,0	1/1:2,32:34:96.24:1124,96,0	1/1:2,0:19:31.25:159,31,0	0/0:25,0:25:72.14:0,72,721	0/0:24,0:24:63.13:0,63,636	0/0:15,0:15:45.09:0,45,451	1/1:4,1:19:39.97:202,40,0	1/1:2,0:16:36.96:188,37,0	0/0:15,0:15:45.08:0,45,450	0/0:20,0:20:57.11:0,57,568	0/0:24,0:24:63.12:0,63,635	0/0:14,0:14:39.05:0,39,387	1/1:2,10:12:33.07:377,33,0	1/1:1,22:23:63.06:745,63,0	1/1:0,11:11:15.05:187,15,0	0/0:10,0:10:24.03:0,24,231	0/0:15,0:15:42.05:0,42,413	0/0:8,0:8:21.05:0,21,214	1/1:2,17:19:45.04:560,45,0	0/1:4,15:19:9.83:484,0,10	1/1:3,11:14:30.09:373,30,0	1/1:2,7:9:21.07:261,21,0
chr10	39820602	.	TA	T	6973.61	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=7.267;DP=653;FS=3.265;HRun=1;HaplotypeScore=78.4655;InbreedingCoeff=0.9982;MQ=74.06;MQ0=0;MQRankSum=0.798;QD=38.32;ReadPosRankSum=-2.459;VQSLOD=4.4727;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,114,1795	0/0:9,0:9:27.09:0,27,430	0/0:13,0:13:39.13:0,39,604	0/0:10,0:10:29.75:0,30,403	0/0:28,0:27:84.29:0,84,1343	0/0:21,0:21:63.21:0,63,1006	0/0:19,0:19:57.19:0,57,910	1/1:0,31:31:90.29:1242,90,0	0/0:27,0:27:81.24:0,81,1246	0/0:35,0:35:99:0,105,1675	0/0:17,0:17:51.17:0,51,815	0/0:31,0:31:93.32:0,93,1483	0/0:38,0:38:99:0,114,1821	0/0:25,0:25:72.25:0,72,1149	0/0:30,0:30:84.26:0,84,1294	0/0:28,0:28:84.27:0,84,1313	0/0:25,0:25:75.26:0,75,1195	0/0:31,0:31:93.30:0,93,1462	1/1:0,18:18:54.18:755,54,0	1/1:0,20:20:60.20:839,60,0	1/1:0,11:11:27.09:378,27,0	0/0:12,0:12:33.11:0,33,528	0/0:19,0:19:57.19:0,57,903	0/0:15,0:15:45.15:0,45,719	1/1:0,22:22:60.20:839,60,0	1/1:0,31:31:93.30:1284,93,0	1/1:0,37:37:99:1384,99,0	1/1:0,12:12:18.06:252,18,0
chr10	39821191	.	TA	T	7251.73	PASS	AC=34;AF=0.630;AN=54;BaseQRankSum=12.511;DP=522;FS=11.931;HRun=10;HaplotypeScore=66.2012;InbreedingCoeff=0.9882;MQ=72.14;MQ0=0;MQRankSum=-0.473;QD=21.45;ReadPosRankSum=0.285;VQSLOD=5.0560;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,16:20:38.93:331,39,0	0/0:6,0:6:12.03:0,12,133	0/0:13,0:12:23.42:0,23,229	./.	0/0:24,0:24:69.16:0,69,746	1/1:3,26:29:74.98:651,75,0	1/1:2,13:15:35.94:312,36,0	1/1:5,24:29:71.66:609,72,0	1/1:1,19:20:53.99:469,54,0	0/0:22,0:22:48.13:0,48,531	0/0:19,0:20:50.17:0,50,511	1/1:1,21:22:53.99:469,54,0	1/1:5,14:19:38.99:339,39,0	1/1:1,18:19:50.99:443,51,0	0/0:26,0:27:63.15:0,63,682	0/0:13,0:13:39.11:0,39,431	0/0:22,0:22:54.13:0,54,588	0/0:23,0:23:58.92:0,59,609	1/1:4,16:20:50.97:440,51,0	1/1:7,26:33:74.76:637,75,0	1/1:2,5:7:15:130,15,0	0/0:9,0:9:18.04:0,18,189	1/1:2,18:20:50.88:443,51,0	1/1:1,5:6:15:130,15,0	1/1:6,21:27:62.97:547,63,0	1/1:1,23:24:68.98:599,69,0	1/1:0,20:20:59.99:521,60,0	1/1:1,7:8:20.99:182,21,0
chr10	39821752	.	A	AAT	17580.76	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-17.726;DP=630;FS=2.077;HRun=0;HaplotypeScore=66.2117;InbreedingCoeff=0.9993;MQ=82.88;MQ0=0;MQRankSum=-1.792;QD=52.48;ReadPosRankSum=1.966;VQSLOD=5.5353;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,31:32:81.28:1642,81,0	0/0:9,0:9:22.32:0,22,341	0/0:17,0:17:45.15:0,45,686	0/0:18,0:18:54.14:0,54,784	0/0:34,0:34:99:0,102,1640	0/0:19,0:19:54.09:0,54,801	0/0:15,0:15:45.15:0,45,734	1/1:1,27:31:90.22:1645,90,0	0/0:13,0:13:39.13:0,39,630	0/0:42,0:42:99:0,126,2007	0/0:31,0:31:90.26:0,90,1438	1/1:0,17:17:51.18:1036,51,0	1/1:1,17:18:45.15:911,45,0	1/1:0,16:16:39.13:792,39,0	0/0:26,0:26:78.27:0,78,1271	0/0:13,0:13:39.13:0,39,636	0/0:18,0:18:54.18:0,54,880	0/0:23,0:22:66.20:0,66,1048	1/1:0,17:18:54.13:950,54,0	1/1:0,29:29:87.30:1734,87,0	1/1:0,23:23:60.21:1218,60,0	0/0:17,0:17:51.16:0,51,803	1/1:0,23:23:56.89:1157,57,0	1/1:0,20:21:54.19:1096,54,0	1/1:1,30:31:75.18:1523,75,0	1/1:1,33:36:59.35:1931,59,0	1/1:1,28:27:72.25:1458,72,0	1/1:0,9:11:24.08:487,24,0
chr10	39822810	.	CA	C	7276.56	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-11.514;DP=754;FS=4.746;HRun=1;HaplotypeScore=132.4048;InbreedingCoeff=0.9998;MQ=79.60;MQ0=0;MQRankSum=-2.519;QD=37.13;ReadPosRankSum=5.026;VQSLOD=4.2645;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,47:47:99:1677,120,0	0/0:10,0:10:27.09:0,27,432	0/0:21,0:21:63.20:0,63,980	0/0:27,0:27:75.02:0,75,1163	0/0:26,0:26:75.22:0,75,1149	0/0:23,0:23:69.23:0,69,1090	0/0:13,0:13:39.13:0,39,624	0/0:30,0:30:90.30:0,90,1419	0/0:23,0:23:69.23:0,69,1092	0/0:38,0:38:99:0,114,1733	0/0:24,0:24:66.21:0,66,1018	1/1:0,33:33:96.32:1340,96,0	1/1:0,31:31:78.26:1080,78,0	1/1:0,30:30:81.27:1125,81,0	0/0:46,0:46:99:0,138,2200	0/0:18,0:18:54.18:0,54,864	0/0:24,0:24:72.25:0,72,1151	0/0:21,0:21:60.09:0,60,955	0/0:17,0:17:48.16:0,48,767	0/0:29,0:29:75.22:0,75,1146	0/0:38,0:38:99:0,114,1813	0/0:22,0:22:63.20:0,63,982	1/1:0,27:27:69.20:964,69,0	1/1:0,28:28:78.26:1090,78,0	0/0:29,0:29:87.30:0,87,1391	0/0:26,0:26:78.26:0,78,1225	0/0:33,0:33:99:0,99,1536	0/0:20,0:20:60.20:0,60,959
chr10	39823166	.	AGC	A	2595.24	PASS	AB=0.773;AC=31;AF=0.574;AN=54;BaseQRankSum=1.979;DP=442;FS=5.869;HRun=0;HaplotypeScore=88.5609;InbreedingCoeff=0.7159;MQ=70.89;MQ0=5;MQRankSum=-2.049;QD=11.38;ReadPosRankSum=2.875;VQSLOD=3.0876;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:48.15:0,48,749	1/1:6,1:7:8.70:69,9,0	0/0:14,0:10:3.01:0,3,40	0/0:19,0:7:3.01:0,3,38	1/1:12,4:16:5.91:54,6,0	0/0:35,0:35:15.35:0,15,122	0/0:21,0:21:23.78:0,24,294	1/1:7,12:19:33.06:395,33,0	0/0:12,0:11:8.76:0,9,82	1/1:8,5:13:27.08:331,27,0	1/1:7,5:12:2.09:57,2,0	0/0:10,0:10:9.03:0,9,147	0/0:11,0:11:12.04:0,12,190	0/0:22,0:22:30.08:0,30,445	0/1:12,5:17:3.34:43,0,3	1/1:10,2:12:5.85:168,6,0	1/1:17,3:20:11.98:127,12,0	1/1:4,4:8:3.01:37,3,0	1/1:3,8:11:27.07:323,27,0	1/1:11,8:19:4.53:140,5,0	1/1:12,8:20:6.02:74,6,0	1/1:4,6:9:5.36:75,5,0	0/0:13,0:13:24.04:0,24,365	0/0:20,0:20:20.98:0,21,345	1/1:9,7:16:11.11:182,11,0	1/1:8,13:21:45.13:548,45,0	1/1:4,3:7:14.99:167,15,0	./.
chr10	39823179	.	G	GTACACACACA	2114.73	PASS	AB=0.893;AC=23;AF=0.411;AN=56;BaseQRankSum=2.345;DP=456;FS=0.000;HRun=0;HaplotypeScore=140.3624;InbreedingCoeff=0.0279;MQ=51.68;MQ0=8;MQRankSum=-5.506;QD=7.42;ReadPosRankSum=-3.506;VQSLOD=1.5098;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:35:53.84:0,54,1313	1/1:3,0:8:11.71:261,12,0	0/0:5,0:1:3.01:0,3,40	0/0:13,0:1:3.01:0,3,38	0/1:10,5:18:2.77:152,0,3	0/1:31,0:31:40.41:79,0,40	0/0:22,0:22:21.04:0,21,282	0/1:18,0:17:59.20:189,0,59	1/1:19,0:18:6.02:68,6,0	0/1:14,0:14:72.95:113,0,73	0/1:16,0:17:2.76:19,0,3	0/0:12,0:12:7.23:0,7,187	0/0:12,0:12:17.73:0,18,292	0/0:20,0:20:32.95:0,33,600	0/1:9,3:16:3.39:146,0,3	0/1:10,0:12:13.38:13,0,20	0/1:6,0:17:29.25:139,0,29	1/1:7,0:7:0.99:4,1,0	0/1:14,0:14:38.43:182,0,38	0/1:20,0:21:6.77:32,0,7	1/1:12,0:13:3.64:74,4,0	0/1:12,0:11:3.07:32,0,3	0/0:17,0:17:27.09:0,27,584	0/0:26,0:26:28.63:0,29,513	0/1:14,0:15:21.41:25,0,21	0/1:20,0:21:3.54:516,0,4	1/1:10,0:11:7.36:232,7,0	0/0:6,0:6:2.66:0,3,37
chr10	39823181	.	G	GTACACACA	2000.86	PASS	AB=1.000;AC=24;AF=0.462;AN=52;BaseQRankSum=-0.111;DP=469;FS=17.290;HRun=0;HaplotypeScore=135.5818;InbreedingCoeff=-0.3794;MQ=49.85;MQ0=9;MQRankSum=-2.090;QD=5.36;ReadPosRankSum=-2.120;VQSLOD=1.3372;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:37,0:35:22.77:23,0,229	1/1:8,0:8:11.75:295,12,0	./.	./.	0/1:18,0:18:16.13:84,0,16	1/1:6,25:34:6.02:244,6,0	0/1:21,0:20:0:0,0,0	0/1:21,0:20:73.09:73,0,148	1/1:6,13:20:6.02:257,6,0	0/1:14,0:14:66.45:66,0,156	0/0:16,0:16:2.99:0,3,24	0/1:12,0:12:15.28:20,0,15	0/1:12,0:12:13.43:31,0,13	0/1:18,0:18:4.57:5,0,102	0/1:13,0:13:18.94:80,0,19	0/0:12,0:12:4.86:0,5,85	0/1:20,0:20:58.79:106,0,59	0/1:7,0:7:12.42:21,0,12	0/1:14,0:14:67.23:67,0,146	0/0:21,0:21:8.85:0,9,71	0/1:15,0:15:13.91:111,0,14	0/0:12,0:11:3:0,3,25	0/1:19,0:19:19.56:20,0,87	0/1:27,0:27:19.11:75,0,19	0/0:16,0:16:11.97:0,12,100	0/1:23,0:22:99:373,0,182	0/1:12,0:12:37.15:182,0,37	0/1:7,0:7:0.62:15,0,1
chr10	39823182	.	T	TACACACAC	5530.30	PASS	AB=0.874;AC=45;AF=0.938;AN=48;BaseQRankSum=-0.865;DP=571;FS=2.094;HRun=0;HaplotypeScore=186.4681;InbreedingCoeff=0.0153;MQ=47.84;MQ0=9;MQRankSum=-1.452;QD=10.89;ReadPosRankSum=0.474;VQSLOD=3.9981;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:37:14.37:131,14,0	1/1:8,1:9:12.04:362,12,0	./.	./.	1/1:25,0:26:7.67:133,8,0	1/1:34,0:34:9.03:317,9,0	0/1:22,0:21:6.21:18,0,6	1/1:26,0:25:21.06:431,21,0	1/1:18,2:20:6.02:221,6,0	1/1:18,0:19:15.92:301,16,0	./.	1/1:8,0:14:5.99:49,6,0	1/1:3,0:14:8.98:73,9,0	1/1:9,0:20:5.97:45,6,0	1/1:18,0:16:3.01:104,3,0	1/1:14,0:14:3.01:35,3,0	1/1:28,0:28:34.02:748,34,0	1/1:11,0:11:9.60:133,10,0	1/1:17,0:17:6.59:127,7,0	1/1:25,2:33:3.48:39,3,0	1/1:18,0:18:11.99:208,12,0	./.	0/1:11,0:21:13.94:59,0,14	1/1:10,0:29:8.12:156,8,0	0/1:16,0:17:0.02:0,0,0	1/1:34,0:33:51.17:1307,51,0	1/1:14,0:15:12.47:274,12,0	1/1:9,0:9:11.87:260,12,0
chr10	39823186	.	C	CACAT	2039.58	PASS	AB=1.000;AC=24;AF=0.462;AN=52;BaseQRankSum=7.101;DP=577;FS=38.381;HRun=0;HaplotypeScore=172.1728;InbreedingCoeff=-0.4377;MQ=47.78;MQ0=9;MQRankSum=-5.419;QD=4.41;ReadPosRankSum=1.236;VQSLOD=1.4086;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:41,0:39:99:181,0,249	1/1:9,0:9:10.32:123,10,0	./.	./.	0/1:29,0:29:22.98:23,0,79	0/1:31,0:31:26.77:118,0,27	0/0:6,14:19:5.91:0,6,40	0/1:23,0:22:53.81:54,0,220	1/1:20,0:19:14.17:139,14,0	0/1:24,0:24:99:153,0,217	0/1:24,0:24:7.02:7,0,17	0/1:14,0:14:14.94:83,0,15	0/1:13,0:13:12.92:128,0,13	0/1:20,0:20:64.66:65,0,123	0/1:18,0:16:16.91:32,0,17	0/0:16,0:16:2.98:0,3,123	0/1:27,0:27:42.28:180,0,42	0/1:11,0:11:31.73:32,0,33	0/0:17,0:17:28.50:0,28,248	0/1:31,0:31:44.99:45,0,49	0/1:18,0:17:34.96:43,0,35	0/0:21,0:20:5.99:0,6,49	0/1:21,0:21:66.16:117,0,66	0/1:29,0:29:18.47:302,0,18	0/0:20,0:20:20.98:0,21,175	0/1:35,0:34:99:228,0,236	0/1:15,0:15:45.86:46,0,69	1/1:9,0:9:11.89:98,12,0
chr10	39824542	.	TACACACACACAC	T	2407.59	PASS	AB=0.875;AC=14;AF=0.269;AN=52;BaseQRankSum=0.859;DP=468;FS=13.088;HRun=0;HaplotypeScore=159.8191;InbreedingCoeff=0.6078;MQ=67.88;MQ0=9;MQRankSum=-4.651;QD=17.20;ReadPosRankSum=0.820;VQSLOD=1.9698;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:39.11:0,39,1842	0/0:6,0:6:6.02:0,6,265	./.	0/0:34,0:22:14.71:0,15,462	0/0:19,0:20:2.68:0,3,156	0/0:14,0:14:9.03:0,9,266	0/0:11,0:11:15.05:0,15,504	1/1:28,0:27:6:56,6,0	0/0:16,0:16:9.03:0,9,406	0/0:16,0:16:27.09:0,27,1352	0/0:9,0:9:3.01:0,3,156	0/0:19,0:19:6.02:0,6,298	0/0:3,0:8:12.04:0,12,447	0/0:6,0:12:9.03:0,9,427	0/0:24,0:24:21.03:0,21,775	0/0:21,0:21:27.09:0,27,887	0/0:17,0:16:24.05:0,24,765	0/0:10,0:9:12.04:0,12,528	1/1:10,2:11:2.96:104,3,0	1/1:13,4:17:6.01:208,6,0	./.	0/0:5,0:5:6.02:0,6,299	0/1:14,0:14:0:0,0,0	0/0:19,0:19:11.51:0,12,584	1/1:9,6:16:18.06:573,18,0	0/1:14,7:21:99:522,0,132	1/1:15,8:25:27.09:895,27,0	1/1:3,4:7:6.02:208,6,0
chr10	39824582	.	C	CAT	2239.56	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=7.890;DP=515;FS=14.210;HRun=0;HaplotypeScore=134.7384;InbreedingCoeff=0.8619;MQ=62.92;MQ0=12;MQRankSum=-1.422;QD=8.33;ReadPosRankSum=0.494;VQSLOD=2.7361;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:0.98:0,1,268	1/1:5,0:5:7.79:51,8,0	0/0:24,0:14:35.21:0,35,393	0/0:18,0:9:26.86:0,27,239	1/1:25,1:25:26.01:220,26,0	1/1:3,2:19:3.01:38,3,0	1/1:2,0:19:5.80:52,6,0	0/0:21,0:20:56.89:0,57,486	1/1:7,1:20:6.02:76,6,0	1/1:6,14:22:40.35:344,40,0	1/1:15,0:15:19.95:169,20,0	1/1:23,0:22:14.98:101,15,0	0/0:15,0:13:14.50:0,15,162	0/0:8,0:8:2.36:0,2,83	1/1:8,1:24:14.53:158,15,0	1/1:18,0:18:29.08:214,29,0	1/1:17,1:18:42.76:380,43,0	1/1:10,1:11:23.72:202,24,0	0/0:14,0:14:35.95:0,36,308	0/0:18,0:18:38.54:0,39,307	0/0:13,0:12:23.90:0,24,188	1/1:0,0:10:13.99:85,14,0	1/1:16,2:18:11.88:97,12,0	1/1:18,1:18:23.72:270,24,0	0/0:19,0:19:38.96:0,39,326	0/0:20,0:20:29.39:0,29,369	0/0:26,0:26:62.77:0,63,495	0/0:18,0:18:29.94:0,30,242
chr10	39824796	.	AGT	A	1151.11	PASS	AB=1.000;AC=20;AF=0.357;AN=56;BaseQRankSum=16.713;DP=872;FS=0.355;HRun=0;HaplotypeScore=207.1106;InbreedingCoeff=0.2588;MQ=64.33;MQ0=6;MQRankSum=-1.245;QD=3.01;ReadPosRankSum=1.454;VQSLOD=2.6888;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:60,1:60:99:0,120,1828	0/1:9,0:9:13.84:14,0,63	0/0:42,0:27:30.09:0,30,405	0/0:50,1:30:17.22:0,17,331	0/1:36,0:36:30.55:78,0,31	0/1:18,0:18:15.64:51,0,16	0/1:17,0:17:2.96:48,0,3	0/0:41,0:41:34.89:0,35,771	1/1:28,0:27:36.51:144,37,0	0/1:22,0:22:19.40:93,0,19	1/1:21,0:20:13.28:76,13,0	0/1:27,0:25:39.23:39,0,41	0/0:30,0:30:66.22:0,66,1031	0/0:38,0:38:90.27:0,90,1369	1/1:44,0:44:63.04:264,63,0	1/1:40,0:40:18.12:160,18,0	0/1:29,0:29:13.27:150,0,13	1/1:25,0:25:16.45:129,16,0	0/0:29,1:28:30.18:0,30,794	0/0:30,0:30:57.19:0,57,894	0/0:52,2:56:46.73:0,47,1620	0/1:28,0:28:23.08:55,0,23	0/1:20,0:20:29.08:29,0,64	0/1:18,0:17:9.61:10,0,72	0/0:30,0:30:61.06:0,61,1058	0/0:40,0:39:63.80:0,64,1041	0/0:23,1:24:18.24:0,18,722	0/0:12,0:12:14.88:0,15,206
chr10	39824812	.	TGTGTGA	T	3633.91	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=16.292;DP=882;FS=4.205;HRun=0;HaplotypeScore=259.2840;InbreedingCoeff=0.9682;MQ=54.84;MQ0=7;MQRankSum=-0.138;QD=9.61;ReadPosRankSum=1.559;VQSLOD=2.5721;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:59,0:58:99:0,129,3744	1/1:10,0:10:4.79:104,5,0	0/0:57,0:22:40.36:0,40,806	0/0:61,0:31:51.77:0,52,936	1/1:31,0:31:31.06:199,31,0	1/1:21,0:21:16.59:185,17,0	1/1:20,0:20:27.05:140,27,0	0/0:35,0:35:81.23:0,81,1880	1/1:27,0:26:40.18:209,40,0	1/1:23,0:23:23.32:156,23,0	1/1:19,1:19:11.07:95,11,0	1/1:12,11:21:42.06:694,42,0	0/0:27,0:27:72.20:0,72,2118	0/0:36,0:36:90.22:0,90,2609	1/1:44,0:44:67.67:292,68,0	1/1:32,2:34:41.08:297,41,0	1/1:32,0:32:22.12:230,22,0	1/1:25,0:25:23.73:231,24,0	0/0:31,0:30:69.13:0,69,1777	0/0:31,0:31:75.16:0,75,1813	0/0:71,0:69:99:0,168,4042	1/1:27,1:28:30.14:166,30,0	1/1:12,9:21:23.95:401,24,0	1/1:12,7:18:17.38:235,17,0	0/0:30,0:29:62.40:0,62,1731	0/0:37,0:36:83.35:0,83,2331	0/0:21,0:21:60.19:0,60,1721	0/0:8,0:8:12.04:0,12,411
chr10	39824814	.	TGTGA	T	10524.25	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=15.325;DP=868;FS=1.312;HRun=0;HaplotypeScore=203.7048;InbreedingCoeff=0.8992;MQ=53.42;MQ0=8;MQRankSum=-2.228;QD=28.91;ReadPosRankSum=1.472;VQSLOD=4.8363;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:57:99:0,132,3091	1/1:6,4:10:18.05:274,18,0	0/0:59,0:23:46.67:0,47,749	0/0:59,0:29:55.97:0,56,943	1/1:16,14:30:45.05:715,45,0	1/1:10,10:20:39.94:650,40,0	1/1:13,5:18:36.41:494,36,0	0/0:34,0:34:84.22:0,84,1646	1/1:9,17:25:51.04:886,51,0	1/1:11,10:21:44.93:773,45,0	1/1:9,11:19:41.58:647,42,0	1/1:24,0:22:29.29:301,29,0	0/0:29,0:29:84.12:0,84,1794	0/0:36,0:36:99:0,102,2236	1/1:13,29:42:93.28:1610,93,0	1/1:11,23:34:76.05:1208,76,0	1/1:12,18:30:80.34:1212,80,0	1/1:12,10:22:38.78:806,39,0	0/0:32,0:31:81.11:0,81,1540	0/0:31,0:31:87.15:0,87,1625	0/0:72,0:70:99:0,183,3392	1/1:13,14:27:44.97:657,45,0	1/1:20,0:21:2.97:191,3,0	0/1:19,0:18:27.63:100,0,28	0/0:31,0:30:53.79:0,54,1522	0/0:36,1:36:39.30:0,39,1965	0/0:20,0:20:60.11:0,60,1380	0/0:6,0:6:12.04:0,12,322
chr10	39824816	.	TGA	T	5056.54	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=18.110;DP=868;FS=2.935;HRun=0;HaplotypeScore=198.9716;InbreedingCoeff=0.9005;MQ=52.94;MQ0=8;MQRankSum=-1.831;QD=13.70;ReadPosRankSum=1.719;VQSLOD=4.9372;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:55:99:0,111,2265	1/1:9,0:9:15.42:120,15,0	0/0:53,0:17:47.95:0,48,591	0/0:60,0:31:45.27:0,45,771	1/1:30,0:30:44.13:319,44,0	1/1:19,1:20:42.69:320,43,0	1/1:18,1:19:41.62:303,42,0	0/0:36,0:35:84.67:0,85,1258	1/1:25,1:25:49.95:347,50,0	1/1:23,0:23:55.11:431,55,0	1/1:21,0:20:40.43:307,40,0	1/1:26,0:24:18.84:230,19,0	0/0:28,0:28:84.05:0,84,1323	0/0:36,0:36:99:0,105,1647	1/1:43,0:43:93.63:685,94,0	1/1:34,0:34:69.42:500,69,0	1/1:30,0:30:56.26:508,56,0	1/1:20,1:21:59.03:441,59,0	0/0:29,0:28:69.79:0,70,1118	0/0:32,0:32:93.10:0,93,1284	0/0:72,0:70:99:0,163,2537	1/1:28,0:28:47.68:361,48,0	1/1:18,0:18:0.75:102,1,0	0/1:21,0:20:7.02:83,0,7	0/0:30,0:29:80.59:0,81,1173	0/0:41,0:40:86.41:0,86,1579	0/0:20,0:20:32.68:0,33,979	0/0:6,0:6:12.04:0,12,229
chr10	39824894	.	AGT	A	7828.89	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=13.866;DP=912;FS=11.912;HRun=0;HaplotypeScore=216.1913;InbreedingCoeff=0.9256;MQ=42.29;MQ0=94;MQRankSum=-1.262;QD=16.18;ReadPosRankSum=1.293;VQSLOD=3.4758;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:37:72.08:0,72,1169	1/1:8,7:15:10.32:218,10,0	0/0:36,0:1:2.99:0,3,23	0/0:53,0:6:5.59:0,6,44	1/1:16,18:31:36.07:353,36,0	1/1:9,16:23:34.31:406,34,0	1/1:18,16:19:31.35:355,31,0	0/0:25,0:24:60.10:0,60,894	1/1:8,23:30:52.75:621,53,0	1/1:12,23:32:2.88:804,3,0	1/1:7,10:14:18.06:234,18,0	1/1:9,23:29:43.40:536,43,0	0/0:36,0:29:66.18:0,66,1032	0/0:44,0:39:78.25:0,78,1284	1/1:22,34:54:71.72:878,72,0	1/1:21,35:51:82.90:846,83,0	1/1:14,29:35:44.59:863,45,0	1/1:13,24:33:23.03:791,23,0	0/0:19,0:17:42.04:0,42,619	0/0:24,0:23:54.15:0,54,842	0/0:77,0:74:99:0,132,2053	1/1:10,13:20:29.55:323,30,0	1/1:2,14:12:21.95:274,22,0	1/1:8,21:26:27.01:330,27,0	0/0:15,0:15:39.12:0,39,636	0/0:25,0:23:57.19:0,57,934	0/0:19,0:15:21.06:0,21,323	0/0:9,0:9:16.51:0,17,303
chr10	39824903	.	G	GA	1991.60	PASS	AB=0.815;AC=13;AF=0.232;AN=56;BaseQRankSum=10.988;DP=880;FS=19.597;HRun=0;HaplotypeScore=221.5472;InbreedingCoeff=-0.3194;MQ=41.38;MQ0=98;MQRankSum=-10.821;QD=4.59;ReadPosRankSum=-3.437;VQSLOD=1.1971;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:36:77.71:0,78,1086	0/1:8,7:15:56.47:200,0,56	0/0:34,0:1:3.01:0,3,41	0/0:48,0:2:6.02:0,6,73	0/1:22,11:30:26.40:26,0,97	0/1:20,3:21:17.02:17,0,80	0/1:25,9:18:57.38:82,0,57	0/0:24,0:23:69.23:0,69,962	0/1:25,6:30:99:195,0,136	0/1:27,7:31:99:248,0,211	0/0:12,2:11:15.44:0,15,65	0/1:29,2:27:32.29:32,0,102	0/0:37,0:30:72.21:0,72,969	0/0:51,0:45:93.31:0,93,1296	0/1:42,15:55:99:263,0,149	0/1:40,17:51:99:510,0,209	0/1:33,9:34:99:157,0,280	0/1:28,9:33:99:290,0,250	0/0:16,0:15:45.15:0,45,619	0/0:19,0:18:54.18:0,54,754	0/0:69,0:66:99:0,121,1762	0/1:17,6:20:65.58:98,0,66	0/1:15,2:13:25.60:26,0,56	0/0:26,3:24:23.46:0,23,119	0/0:14,0:14:39.13:0,39,545	0/0:22,0:20:60.20:0,60,835	0/0:17,0:13:21.06:0,21,293	0/0:7,0:7:21.04:0,21,273
chr10	39824964	.	AGTG	A	1799.69	PASS	AB=0.735;AC=14;AF=0.280;AN=50;BaseQRankSum=8.533;DP=479;FS=31.935;HRun=0;HaplotypeScore=126.4439;InbreedingCoeff=0.0417;MQ=39.77;MQ0=60;MQRankSum=-6.817;QD=13.43;ReadPosRankSum=1.126;VQSLOD=1.7478;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:43:99:0,105,2443	0/1:6,2:8:43.52:44,0,155	0/0:51,0:9:19.88:0,20,417	0/0:53,0:11:28.48:0,28,503	0/1:6,1:6:0.38:1,0,0	1/1:2,6:7:5.72:110,6,0	0/0:6,4:7:3.01:0,3,72	0/0:16,0:12:35.99:0,36,715	0/1:4,8:11:99:254,0,194	0/1:2,2:3:63.98:102,0,64	./.	1/1:2,9:9:7.86:267,8,0	0/0:38,0:33:90.31:0,90,2196	0/0:58,0:53:99:0,129,3130	0/1:11,9:18:99:311,0,120	0/1:12,10:20:99:403,0,396	0/1:10,6:10:55.85:249,0,56	0/1:6,4:11:99:194,0,246	0/0:14,0:12:35.83:0,36,701	./.	0/0:17,0:15:2.30:0,2,71	0/1:6,2:8:0:0,0,1	0/1:2,1:3:0.01:0,0,1	0/0:6,6:7:2.35:0,2,72	0/0:1,0:1:3.01:0,3,74	0/0:9,0:6:18.05:0,18,327	0/0:9,0:5:3.48:0,3,74	./.
chr10	39824984	.	A	ATAT	383.12	PASS	AB=0.929;AC=15;AF=0.395;AN=38;BaseQRankSum=7.666;DP=361;FS=10.760;HRun=0;HaplotypeScore=96.8304;InbreedingCoeff=0.4647;MQ=44.64;MQ0=38;MQRankSum=-5.743;QD=4.91;ReadPosRankSum=-3.689;VQSLOD=0.3204;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:47:99:0,123,2293	./.	0/0:50,0:9:20.41:0,20,380	0/0:49,0:11:26.76:0,27,435	./.	1/1:2,0:2:6.02:66,6,0	0/1:3,0:1:0:0,0,0	0/0:19,0:12:32.98:0,33,470	1/1:6,2:4:11.51:101,12,0	./.	./.	1/1:5,3:5:11.86:107,12,0	0/0:36,0:35:93.32:0,93,1702	0/0:54,0:53:99:0,147,2709	0/1:10,2:7:6.64:99,0,7	1/1:4,1:4:11.34:71,11,0	0/1:7,1:5:25.91:26,0,63	0/1:8,1:8:45.89:46,0,161	0/0:8,0:6:18.01:0,18,239	./.	0/1:13,0:11:0.06:0,0,0	./.	./.	1/1:10,0:6:0.40:1,0,0	0/0:4,0:1:3.01:0,3,37	0/0:5,0:2:5.86:0,6,38	./.	./.
chr10	39825010	.	AGT	A	140.90	PASS	AB=0.669;AC=8;AF=0.167;AN=48;BaseQRankSum=5.386;DP=445;FS=11.711;HRun=0;HaplotypeScore=82.8371;InbreedingCoeff=0.2692;MQ=35.57;MQ0=92;MQRankSum=-4.757;QD=3.00;ReadPosRankSum=-3.102;VQSLOD=0.2619;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:42:99:0,99,1565	0/0:2,0:2:2.57:0,3,18	./.	./.	0/0:4,1:5:2.88:0,3,15	0/1:4,2:6:24.57:25,0,25	./.	0/0:30,0:26:78.21:0,78,1253	./.	1/1:4,1:1:3.01:38,3,0	0/0:7,2:6:2.84:0,3,19	0/0:10,3:9:2.48:0,2,15	0/0:32,0:27:60.12:0,60,906	0/0:52,0:47:93.29:0,93,1520	1/1:8,8:12:4.44:41,4,0	0/0:9,1:9:8.23:0,8,53	1/1:7,2:8:9.66:56,10,0	0/1:3,7:8:10.83:102,0,11	0/0:7,0:4:9.03:0,9,136	0/0:6,0:3:3.01:0,3,48	0/0:25,0:21:5.88:0,6,71	0/0:5,2:6:2.96:0,3,19	0/0:4,3:5:5.90:0,6,36	0/0:11,5:13:4.07:0,4,34	0/0:12,0:3:6.02:0,6,88	0/0:10,0:6:15.04:0,15,229	0/0:2,0:2:2.99:0,3,24	0/0:5,0:5:9.03:0,9,147
chr10	39825019	.	G	GA	1944.63	PASS	AB=0.677;AC=23;AF=0.460;AN=50;BaseQRankSum=8.327;DP=541;FS=4.755;HRun=0;HaplotypeScore=103.1405;InbreedingCoeff=0.5073;MQ=37.64;MQ0=109;MQRankSum=-0.800;QD=10.46;ReadPosRankSum=-4.851;VQSLOD=2.4142;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:42:99:0,105,1448	1/1:2,2:4:6.02:95,6,0	./.	./.	1/1:9,4:13:6.49:97,6,0	0/1:4,8:12:47.30:129,0,47	./.	0/0:32,0:29:87.08:0,87,1166	1/1:6,6:7:6.02:96,6,0	0/1:5,4:4:2.75:87,0,3	1/1:7,8:11:9.03:137,9,0	1/1:10,7:13:11.83:188,12,0	0/0:36,0:30:69.22:0,69,941	0/0:52,0:47:99:0,99,1375	0/1:11,11:18:27.67:303,0,28	1/1:7,11:17:21.07:325,21,0	0/1:4,7:9:53.06:123,0,53	0/1:10,3:11:70.91:95,0,71	0/0:8,0:6:15.05:0,15,208	0/0:8,0:5:6.02:0,6,83	0/0:32,0:29:22.86:0,23,365	1/1:11,2:12:12.04:191,12,0	1/1:9,2:8:8.85:120,9,0	1/1:6,10:12:8.81:144,9,0	0/0:15,0:6:15.05:0,15,205	0/0:11,0:7:21.06:0,21,274	0/0:4,0:4:9.03:0,9,124	0/0:9,0:9:17.98:0,18,208
chr10	39825080	.	AGTG	A	3035.59	PASS	AB=0.823;AC=13;AF=0.232;AN=56;BaseQRankSum=14.124;DP=993;FS=0.901;HRun=0;HaplotypeScore=256.2488;InbreedingCoeff=-0.2947;MQ=50.99;MQ0=62;MQRankSum=-13.032;QD=6.49;ReadPosRankSum=0.828;VQSLOD=2.4337;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:38:95.39:0,95,2321	0/1:10,2:12:81.54:82,0,561	0/0:50,0:12:25.19:0,25,312	0/0:39,0:9:21.07:0,21,481	0/1:21,11:33:99:207,0,1297	0/1:19,5:24:99:169,0,978	0/1:33,5:30:2.73:3,0,1341	0/0:31,0:31:84.27:0,84,1875	0/1:24,7:30:99:314,0,1245	0/1:35,6:38:99:221,0,2180	0/1:18,10:27:99:495,0,716	0/1:41,6:44:68.14:68,0,2069	0/0:35,0:31:84.29:0,84,1974	0/0:44,0:39:99:0,99,2373	0/1:43,10:52:99:277,0,2103	0/1:38,11:49:99:484,0,2217	0/0:32,3:31:10.38:0,10,1491	0/1:31,5:33:84.91:85,0,1638	0/0:12,0:10:30.10:0,30,729	0/0:30,0:28:75.26:0,75,1790	0/0:69,0:67:99:0,165,4046	0/1:30,13:43:99:574,0,1382	0/1:23,7:31:99:210,0,1151	0/0:25,1:21:38.75:0,39,906	0/0:37,0:29:81.28:0,81,1996	0/0:28,0:27:81.28:0,81,1953	0/0:18,0:18:54.12:0,54,1246	0/0:28,0:27:43.96:0,44,1517
chr10	39825120	.	T	TGA	13976.49	PASS	AB=0.656;AC=24;AF=0.429;AN=56;BaseQRankSum=-3.726;DP=1107;FS=0.000;HRun=0;HaplotypeScore=205.5918;InbreedingCoeff=0.5696;MQ=55.22;MQ0=15;MQRankSum=-0.964;QD=25.41;ReadPosRankSum=5.654;VQSLOD=5.1433;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,111,1828	1/1:1,14:15:27.09:499,27,0	0/0:48,0:22:43.97:0,44,561	0/0:49,0:25:55.29:0,55,649	1/1:5,28:34:41.21:969,41,0	0/1:12,0:22:31.91:386,0,32	0/1:12,1:32:99:124,0,249	0/0:56,0:54:99:0,139,1669	0/1:23,1:37:96.22:555,0,96	1/1:2,36:39:84.47:1618,84,0	1/1:9,17:25:57.17:998,57,0	0/1:9,2:49:70.67:506,0,71	0/0:32,0:32:78.23:0,78,1160	0/0:48,0:48:99:0,120,1707	1/1:20,42:60:99:2440,122,0	1/1:23,28:51:95.69:1747,96,0	1/1:15,22:35:72.12:1217,72,0	1/1:6,33:38:55.83:1312,56,0	0/0:24,0:23:53.28:0,53,625	0/0:37,0:37:99:0,105,1418	0/0:78,0:76:99:0,198,2802	1/1:6,37:44:41.42:969,41,0	0/1:8,0:36:43.84:401,0,44	0/1:18,0:23:9.90:234,0,10	0/0:36,0:36:99:0,99,1334	0/0:35,0:34:59.28:0,59,1220	0/0:30,0:30:84.23:0,84,1180	0/0:31,0:31:84.09:0,84,1039
chr10	39826077	.	GGTT	G	5499.92	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-0.606;DP=453;FS=16.588;HRun=0;HaplotypeScore=87.0295;InbreedingCoeff=0.9808;MQ=67.61;MQ0=0;MQRankSum=-2.646;QD=38.73;ReadPosRankSum=2.093;VQSLOD=4.9392;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:69.10:0,69,1351	0/0:10,0:10:30.08:0,30,589	0/0:9,0:9:26.62:0,27,359	0/0:6,0:6:11.68:0,12,124	0/0:27,0:27:81.24:0,81,1678	0/0:19,0:19:51.37:0,51,268	0/0:17,0:17:37.14:0,37,258	1/1:0,19:19:57.03:839,57,0	0/0:13,0:13:34.54:0,35,215	0/0:16,0:16:48.08:0,48,893	0/0:19,0:19:57.17:0,57,1253	0/0:12,0:12:34.24:0,34,192	0/0:16,0:16:48.06:0,48,940	0/0:21,0:21:63.21:0,63,1393	0/0:12,0:12:36.03:0,36,667	0/0:15,0:15:39.13:0,39,914	0/0:15,0:15:45.10:0,45,1002	0/0:18,0:18:54.16:0,54,1203	1/1:0,11:12:32.86:407,33,0	1/1:1,13:16:32.90:498,33,0	1/1:0,13:13:30.10:544,30,0	0/0:11,0:11:30.10:0,30,711	0/0:26,0:26:61.57:0,62,370	0/0:6,0:6:14.12:0,14,69	1/1:0,17:18:48.06:836,48,0	1/1:7,11:22:65.48:879,65,0	1/1:0,36:39:78.10:1334,78,0	1/1:0,3:3:9.03:164,9,0
chr10	39826078	.	GTT	G	3533.11	PASS	AB=1.000;AC=28;AF=0.500;AN=56;BaseQRankSum=12.160;DP=454;FS=13.456;HRun=12;HaplotypeScore=84.6361;InbreedingCoeff=0.8673;MQ=67.62;MQ0=1;MQRankSum=-1.794;QD=14.54;ReadPosRankSum=3.067;VQSLOD=1.0097;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:57.14:0,57,785	0/0:8,0:10:26.05:0,26,313	0/0:9,0:9:21.04:0,21,261	0/1:7,0:6:2.93:3,0,57	0/0:25,0:27:72.20:0,72,997	1/1:2,17:19:48.09:488,48,0	1/1:4,13:17:36.05:366,36,0	1/1:19,0:19:23.74:178,24,0	1/1:3,10:13:10.30:255,10,0	0/0:16,0:16:39.12:0,39,546	0/0:19,0:20:59.68:0,60,836	1/1:3,9:12:27.05:275,27,0	0/0:15,0:16:38.60:0,39,508	0/0:20,0:21:58.45:0,58,794	0/0:12,0:12:30.05:0,30,401	0/0:13,0:13:39.09:0,39,557	0/0:15,0:15:42.11:0,42,602	0/0:18,0:18:48.13:0,48,691	1/1:12,0:12:13.55:101,14,0	1/1:16,0:16:28.15:153,28,0	1/1:13,0:13:28.91:158,29,0	0/0:9,0:10:30.09:0,30,432	1/1:6,20:26:47.65:488,48,0	1/1:0,6:6:15.03:153,15,0	1/1:18,0:18:46.42:262,46,0	0/1:23,0:23:9.34:187,0,9	1/1:39,0:39:75.13:419,75,0	1/1:3,0:3:8.71:48,9,0
chr10	39826174	.	AAAAG	A	3514.25	PASS	AB=1.000;AC=35;AF=0.625;AN=56;BaseQRankSum=6.244;DP=573;FS=4.526;HRun=0;HaplotypeScore=160.7845;InbreedingCoeff=0.7061;MQ=59.49;MQ0=3;MQRankSum=-2.291;QD=9.65;ReadPosRankSum=1.937;VQSLOD=3.0176;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:8,14:22:30.10:476,30,0	1/1:5,0:5:2.96:19,3,0	0/0:23,0:14:6.01:0,6,72	0/1:5,0:4:0:0,0,0	0/1:29,0:29:15.40:171,0,15	1/1:24,0:24:24.03:223,24,0	1/1:17,0:17:14.80:101,15,0	0/0:27,0:27:35.94:0,36,462	1/1:26,0:26:18.02:168,18,0	1/1:24,0:24:30.74:281,31,0	1/1:21,0:21:26.83:221,27,0	1/1:20,0:20:17.92:147,18,0	1/1:10,17:27:33.11:524,33,0	1/1:11,15:26:27.07:404,27,0	1/1:16,0:16:32.96:281,33,0	1/1:21,0:21:21.02:192,21,0	0/1:21,0:21:9.13:42,0,9	1/1:14,0:14:6:55,6,0	0/0:22,0:22:43.30:0,43,650	0/0:33,0:35:75.10:0,75,1088	0/0:4,0:4:2.94:0,3,18	1/1:11,0:11:5.94:41,6,0	1/1:22,0:22:6.82:44,7,0	1/1:13,0:13:14.48:124,14,0	0/0:25,0:25:53.92:0,54,629	0/0:26,0:26:57.15:0,57,969	0/0:40,0:40:75.02:0,75,1048	0/0:7,0:7:9.03:0,9,115
chr10	39826195	.	AAAGAAAGAAAGAAAGG	A	6432.78	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=10.329;DP=606;FS=0.410;HRun=0;HaplotypeScore=255.7684;InbreedingCoeff=0.3877;MQ=56.23;MQ0=8;MQRankSum=-3.059;QD=20.82;ReadPosRankSum=3.770;VQSLOD=3.3941;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:42.09:0,42,1475	1/1:8,0:8:12.26:76,12,0	0/0:21,0:7:4.74:0,5,150	0/1:10,0:3:5.93:6,0,22	0/1:26,0:26:90.70:366,0,91	1/1:0,21:21:24.08:1132,24,0	1/1:0,16:16:15.05:641,15,0	0/0:30,0:29:87.23:0,87,2086	1/1:3,21:24:18.06:849,18,0	1/1:29,0:29:15.43:736,15,0	0/1:19,0:19:25.87:357,0,26	0/1:18,0:18:45.91:642,0,46	0/0:26,0:26:57.16:0,57,2047	0/0:25,0:25:51.15:0,51,1629	0/1:25,0:25:10.88:375,0,11	0/1:25,0:25:0.92:257,0,1	0/1:22,0:22:61.95:79,0,62	0/1:15,0:15:48.31:65,0,48	0/0:27,0:26:75.16:0,75,2917	0/0:38,0:38:99:0,114,5195	0/0:7,0:7:20.99:0,21,512	0/1:11,0:11:1.24:97,0,1	1/1:22,0:22:12.47:247,12,0	1/1:18,0:18:13.69:509,14,0	0/0:27,0:27:72.25:0,72,3603	0/0:26,0:26:76.80:0,77,4145	0/0:39,0:39:99:0,114,5115	0/0:11,0:10:12.14:0,12,814
chr10	39826198	.	GAAAGAAAGAAAGGAAC	G	6368.90	PASS	AB=1.000;AC=26;AF=0.464;AN=56;BaseQRankSum=10.107;DP=607;FS=1.421;HRun=0;HaplotypeScore=255.8730;InbreedingCoeff=0.5706;MQ=53.55;MQ0=8;MQRankSum=-4.082;QD=20.68;ReadPosRankSum=3.243;VQSLOD=3.4519;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:51.10:0,51,1554	1/1:8,0:8:5.72:43,6,0	0/0:18,0:6:13.94:0,14,236	0/1:9,0:3:0.76:1,0,56	0/1:27,0:27:96.80:480,0,97	1/1:21,0:21:24.08:993,24,0	1/1:16,0:16:15.05:555,15,0	0/0:34,0:33:96.23:0,96,1912	1/1:21,0:21:18.06:747,18,0	0/1:28,0:28:3.30:659,0,3	0/1:19,0:19:78.44:319,0,78	1/1:3,15:18:18.06:777,18,0	0/0:27,0:27:60.13:0,60,2082	0/0:24,0:24:48.13:0,48,1606	1/1:25,0:25:33.10:417,33,0	1/1:26,0:26:21.07:283,21,0	0/1:24,0:24:27.50:68,0,28	1/1:15,0:15:4.74:79,5,0	0/0:29,0:28:78.13:0,78,2824	0/0:37,0:37:99:0,105,4866	0/0:7,0:7:20.98:0,21,508	0/1:13,0:13:47.95:63,0,48	1/1:0,21:21:12:298,12,0	1/1:2,14:16:14.68:588,15,0	0/0:25,0:25:72.25:0,72,3309	0/0:27,0:27:56.27:0,56,4005	0/0:39,0:39:99:0,105,4789	0/0:11,0:10:12.03:0,12,795
chr10	39826199	.	AAAGAAAGAAAGG	A	9515.87	PASS	AB=0.773;AC=30;AF=0.536;AN=56;BaseQRankSum=7.970;DP=611;FS=4.917;HRun=0;HaplotypeScore=209.9365;InbreedingCoeff=0.8454;MQ=53.49;MQ0=8;MQRankSum=-1.793;QD=31.00;ReadPosRankSum=2.821;VQSLOD=4.2041;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:50.97:0,51,951	1/1:0,8:8:11.82:146,12,0	0/0:19,0:6:11.04:0,11,165	0/1:10,0:3:0.77:1,0,23	1/1:1,26:27:68.72:1269,69,0	1/1:21,0:21:24.08:740,24,0	1/1:16,0:16:15.05:398,15,0	0/0:35,0:34:99:0,99,1474	1/1:21,0:21:18.06:556,18,0	1/1:0,28:28:68.62:1511,69,0	1/1:0,19:19:44.78:1056,45,0	1/1:18,0:18:18.06:485,18,0	0/0:29,0:29:65.95:0,66,1313	0/0:24,0:24:48.10:0,48,893	1/1:1,23:24:33.11:1214,33,0	1/1:1,25:26:21.07:791,21,0	0/1:4,20:24:24.95:227,0,25	1/1:4,11:15:4.74:224,5,0	0/0:29,0:28:78.11:0,78,2179	0/0:37,0:37:99:0,105,3742	0/0:7,0:7:20.90:0,21,355	1/1:0,13:13:20.69:295,21,0	1/1:21,0:21:12.53:197,13,0	1/1:15,0:15:14.65:406,15,0	0/0:25,0:25:72.25:0,72,2571	0/0:27,0:27:79.71:0,80,3095	0/0:40,0:40:99:0,108,3659	0/0:11,0:10:12:0,12,551
chr10	39826463	.	CG	C	15323.93	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=16.254;DP=816;FS=3.732;HRun=1;HaplotypeScore=84.9446;InbreedingCoeff=0.9999;MQ=82.41;MQ0=0;MQRankSum=-3.685;QD=36.75;ReadPosRankSum=4.060;VQSLOD=5.3342;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,150,2287	1/1:0,13:13:36.12:503,36,0	0/0:20,0:21:46.31:0,46,776	0/0:28,0:28:75.25:0,75,1168	1/1:0,24:24:54.18:750,54,0	1/1:0,33:33:90.30:1258,90,0	1/1:0,30:30:78.26:1091,78,0	0/0:37,0:37:99:0,111,1693	1/1:0,28:28:66.22:923,66,0	1/1:0,30:30:84.28:1173,84,0	1/1:1,26:27:75.25:1034,75,0	1/1:0,33:33:87.29:1216,87,0	0/0:27,0:27:81.22:0,81,1240	0/0:30,0:30:87.30:0,87,1382	1/1:0,31:31:84.28:1175,84,0	1/1:0,35:35:99:1427,102,0	1/1:0,32:32:84.28:1174,84,0	1/1:0,16:16:45.15:627,45,0	0/0:23,0:23:69.21:0,69,1062	0/0:27,0:27:81.26:0,81,1264	0/0:42,0:42:99:0,126,1950	1/1:0,25:25:63.21:880,63,0	1/1:0,34:34:87.29:1213,87,0	1/1:0,26:26:63.21:881,63,0	0/0:23,0:23:60.20:0,60,955	0/0:34,1:35:63.38:0,63,1558	0/0:46,0:46:99:0,138,2136	0/0:10,0:10:30.10:0,30,478
chr10	39826751	.	AAAGCGAC	A	20188.03	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=20.376;DP=607;FS=1.754;HRun=0;HaplotypeScore=217.5226;InbreedingCoeff=0.9833;MQ=85.54;MQ0=0;MQRankSum=-20.122;QD=70.84;ReadPosRankSum=3.554;VQSLOD=5.0313;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:69.24:0,69,2779	1/1:0,11:11:33.11:889,33,0	0/0:24,0:24:72.24:0,72,2450	0/0:28,0:28:81.24:0,81,2798	1/1:2,21:23:60.21:1524,60,0	1/1:1,25:26:75.26:2021,75,0	1/1:1,11:12:33.11:873,33,0	0/0:29,0:29:78.26:0,78,2903	1/1:1,23:25:72.25:1939,72,0	1/1:4,19:23:57.19:1530,57,0	1/1:2,16:18:51.17:1324,51,0	1/1:2,20:22:60.20:1615,60,0	0/0:30,0:30:90.31:0,90,3548	0/0:20,0:20:60.20:0,60,2337	1/1:1,29:30:87.30:2342,87,0	1/1:3,19:22:60.21:1617,60,0	1/1:1,8:9:24.06:589,24,0	1/1:2,7:9:21.07:566,21,0	0/0:23,0:23:69.24:0,69,2684	0/0:24,0:24:69.24:0,69,2751	0/0:31,0:31:90.31:0,90,3534	1/1:3,15:17:45.15:1211,45,0	1/1:2,25:27:72.25:1912,72,0	1/1:4,6:10:8.71:236,9,0	0/0:12,0:12:33.11:0,33,1329	0/0:31,1:32:9.48:0,9,3414	0/0:33,0:33:99:0,99,3739	0/0:12,0:12:36.12:0,36,1439
chr10	39826793	.	TAC	T	6038.48	PASS	AB=0.974;AC=27;AF=0.482;AN=56;BaseQRankSum=18.306;DP=665;FS=3.705;HRun=0;HaplotypeScore=190.6958;InbreedingCoeff=0.8127;MQ=91.67;MQ0=1;MQRankSum=-11.904;QD=18.03;ReadPosRankSum=6.539;VQSLOD=4.7802;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:81.28:0,81,1591	0/1:11,1:12:7.13:164,0,7	0/0:43,0:43:99:0,110,2154	0/0:23,0:23:63.16:0,63,1088	1/1:31,0:31:74.22:541,74,0	1/1:26,0:26:29.45:396,29,0	1/1:20,0:20:32.19:290,32,0	0/0:29,0:29:87.24:0,87,1579	1/1:23,0:23:47.56:449,48,0	1/1:31,0:30:8.39:422,8,0	1/1:22,1:23:62.75:552,63,0	1/1:24,0:24:68.36:502,68,0	0/0:30,0:30:90.30:0,90,1790	0/0:17,0:17:51.16:0,51,945	1/1:33,1:34:64.25:694,64,0	0/1:19,0:19:25.28:234,0,25	1/1:12,0:12:17.59:206,18,0	0/1:13,0:13:2.52:150,0,3	0/0:21,0:21:63.20:0,63,1144	0/0:25,0:25:72.25:0,72,1402	0/0:20,0:20:57.20:0,57,1106	1/1:29,1:30:83.15:648,83,0	1/1:23,0:23:68.73:558,69,0	1/1:14,0:14:35.37:232,35,0	0/0:19,0:19:57.13:0,57,1058	0/0:32,0:32:74.30:0,74,1845	0/0:27,0:27:81.21:0,81,1488	0/0:17,0:17:51.13:0,51,994
chr10	39826794	.	ACC	A	12097.68	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=16.966;DP=661;FS=2.452;HRun=5;HaplotypeScore=167.2551;InbreedingCoeff=0.9996;MQ=91.78;MQ0=1;MQRankSum=-12.560;QD=36.66;ReadPosRankSum=5.479;VQSLOD=3.1111;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:81.25:0,81,1424	1/1:3,8:11:24.08:335,24,0	0/0:43,0:43:99:0,119,1954	0/0:22,0:22:57.12:0,57,905	1/1:0,31:31:75.25:1048,75,0	1/1:4,21:25:60.20:839,60,0	1/1:2,18:20:48.16:672,48,0	0/0:30,0:30:78.24:0,78,1337	1/1:1,21:22:63.21:881,63,0	1/1:4,27:30:78.25:1072,78,0	1/1:2,21:23:63.21:878,63,0	1/1:0,24:24:69.23:965,69,0	0/0:30,0:30:87.30:0,87,1583	0/0:19,0:19:57.14:0,57,915	1/1:3,31:34:96.32:1341,96,0	1/1:5,12:17:39.13:545,39,0	1/1:1,11:12:33.11:462,33,0	1/1:3,10:13:30.10:420,30,0	0/0:21,0:21:57.13:0,57,945	0/0:25,0:25:75.22:0,75,1302	0/0:20,0:20:60.17:0,60,1005	1/1:2,28:30:84.28:1173,84,0	1/1:0,23:23:69.23:964,69,0	1/1:1,13:14:36.11:504,36,0	0/0:20,0:20:54.17:0,54,955	0/0:31,1:32:54.37:0,54,1663	0/0:25,0:25:75.25:0,75,1330	0/0:17,0:17:48.16:0,48,877
chr10	39831684	.	C	CAATA	13168.77	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-6.586;DP=637;FS=0.325;HRun=0;HaplotypeScore=127.9998;InbreedingCoeff=0.9635;MQ=86.99;MQ0=0;MQRankSum=-8.160;QD=64.24;ReadPosRankSum=-0.094;VQSLOD=6.3681;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:72.25:0,72,1326	1/1:4,9:13:33.07:797,33,0	0/0:24,0:24:56.72:0,57,938	0/0:26,0:26:54.01:0,54,1043	1/1:19,13:33:78.18:1803,78,0	0/0:35,0:35:96.30:0,96,1729	0/0:16,0:16:45.14:0,45,804	0/0:27,0:27:69.23:0,69,1256	0/0:22,0:22:66.23:0,66,1231	1/1:9,13:23:63.19:1443,63,0	1/1:6,10:16:45.11:1080,45,0	0/0:20,0:20:60.21:0,60,1120	0/0:16,0:16:45.15:0,45,833	0/0:26,0:26:75.26:0,75,1400	1/1:6,32:39:99:2680,102,0	1/1:4,18:23:1.20:1382,1,0	1/1:4,20:24:60.21:1597,60,0	1/1:3,11:14:42.11:967,42,0	0/0:21,0:21:54.18:0,54,995	0/0:30,0:30:81.26:0,81,1470	0/0:29,0:28:84.27:0,84,1527	1/1:9,10:20:57.15:1417,57,0	0/0:24,0:24:65.74:0,66,1220	0/0:18,0:18:51.13:0,51,899	0/0:13,0:13:36.12:0,36,665	0/0:23,0:23:63.22:0,63,1150	0/0:30,0:30:84.28:0,84,1521	0/0:8,0:8:21.07:0,21,368
chr10	39831912	.	GA	G	2823.86	PASS	AB=0.708;AC=40;AF=0.714;AN=56;BaseQRankSum=0.319;DP=445;FS=5.063;HRun=14;HaplotypeScore=54.2341;InbreedingCoeff=0.3951;MQ=58.37;MQ0=12;MQRankSum=-2.208;QD=7.82;ReadPosRankSum=2.421;VQSLOD=2.5405;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:31,7:35:16.48:16,0,409	1/1:2,4:7:13.90:88,14,0	0/0:33,0:6:8.35:0,8,42	0/0:25,0:9:13.36:0,13,79	1/1:6,10:19:29.79:182,30,0	1/1:3,9:14:27.84:176,28,0	1/1:5,8:14:19.77:127,20,0	1/1:9,11:24:10.82:189,11,0	1/1:4,5:10:16.86:107,17,0	1/1:3,8:11:23.80:164,24,0	1/1:5,10:16:25.78:170,26,0	0/1:5,1:7:16.90:35,0,17	0/0:7,0:7:9:0,9,78	0/0:9,0:11:10.27:0,10,152	1/1:8,14:23:28.72:191,29,0	0/1:5,9:14:25.35:117,0,25	1/1:3,13:18:11.91:210,12,0	1/1:1,18:17:32.61:226,33,0	0/1:7,4:17:4.74:83,0,5	1/1:9,15:26:6.92:184,7,0	1/1:2,4:8:9.96:53,10,0	1/1:6,5:12:7.89:47,8,0	1/1:4,11:16:34.73:232,35,0	0/1:4,2:7:4.70:36,0,5	0/1:5,4:11:3.63:36,0,4	1/1:3,9:15:32.81:200,33,0	1/1:6,8:14:17.34:121,17,0	0/0:4,1:3:0:0,0,0
chr10	39832494	.	GT	G	8892.57	PASS	AB=0.933;AC=48;AF=0.857;AN=56;BaseQRankSum=1.785;DP=522;FS=0.000;HRun=10;HaplotypeScore=58.2661;InbreedingCoeff=0.7437;MQ=54.61;MQ0=3;MQRankSum=-1.828;QD=18.80;ReadPosRankSum=3.165;VQSLOD=5.5486;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:51.10:0,51,551	1/1:3,11:13:29.98:260,30,0	0/1:7,0:7:4.19:4,0,117	0/1:11,2:10:32.71:33,0,137	1/1:3,23:26:50.96:442,51,0	1/1:1,16:17:47.99:417,48,0	1/1:1,11:11:23.99:208,24,0	1/1:7,22:25:53.91:457,54,0	1/1:3,11:14:26.98:234,27,0	1/1:4,23:27:68.94:595,69,0	1/1:3,19:22:44.11:389,44,0	1/1:1,27:28:71.98:625,72,0	0/0:15,1:16:13.91:0,14,361	0/0:11,0:11:30.03:0,30,309	1/1:5,17:23:47.02:396,47,0	1/1:3,24:27:35.79:539,36,0	1/1:3,21:23:53.98:469,54,0	1/1:4,10:13:28.80:239,29,0	1/1:8,10:18:29.94:253,30,0	1/1:2,22:24:59.98:521,60,0	1/1:3,10:13:26.98:234,27,0	1/1:0,7:7:15:130,15,0	1/1:1,17:18:44.98:390,45,0	1/1:1,12:13:26.98:234,27,0	1/1:1,18:19:41.98:364,42,0	1/1:0,14:14:41.99:364,42,0	1/1:2,33:35:83.88:728,84,0	1/1:0,15:15:41.99:365,42,0
chr10	39838856	.	TACACAC	T	766.29	PASS	AB=0.893;AC=11;AF=0.212;AN=52;BaseQRankSum=0.174;DP=515;FS=3.594;HRun=0;HaplotypeScore=129.6154;InbreedingCoeff=0.5835;MQ=59.10;MQ0=14;MQRankSum=-2.064;QD=7.98;ReadPosRankSum=-0.295;VQSLOD=2.3268;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:39:17.84:0,18,409	0/0:3,0:5:3.47:0,3,80	./.	./.	0/0:11,0:16:9.03:0,9,213	0/1:22,1:25:77.73:248,0,78	1/1:10,0:9:8.86:117,9,0	0/0:31,0:28:19.38:0,19,413	1/1:9,6:15:12.04:243,12,0	0/0:3,0:9:21.07:0,21,500	0/0:11,0:11:6.02:0,6,169	1/1:10,6:16:8.81:182,9,0	0/0:14,0:14:24.08:0,24,535	0/0:20,0:20:21.05:0,21,398	0/0:15,0:24:18.52:0,19,377	0/0:11,0:16:9.03:0,9,241	0/0:18,0:17:21.07:0,21,486	0/0:12,0:12:16.30:0,16,354	0/0:18,0:17:15.52:0,16,381	0/0:17,0:17:5.04:0,5,62	0/0:22,0:22:18.02:0,18,336	0/0:7,0:15:9.03:0,9,250	1/1:12,1:12:3.01:61,3,0	1/1:15,0:15:3.89:62,4,0	0/0:13,0:13:2.16:0,2,76	0/0:25,0:25:54.19:0,54,1361	0/0:20,0:18:21.07:0,21,450	0/0:7,0:7:3.01:0,3,65
chr10	39839079	.	GT	G	8411.44	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=4.728;DP=486;FS=1.576;HRun=10;HaplotypeScore=48.2584;InbreedingCoeff=0.9646;MQ=78.73;MQ0=0;MQRankSum=-1.496;QD=21.29;ReadPosRankSum=1.702;VQSLOD=5.7005;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:66.16:0,66,720	1/1:1,8:9:17.99:156,18,0	0/0:18,0:18:33.05:0,33,348	0/0:7,0:7:12.02:0,12,121	1/1:2,23:25:56.96:494,57,0	1/1:5,18:23:21.29:410,21,0	1/1:0,11:11:24:208,24,0	1/1:5,32:37:92.95:802,93,0	1/1:1,15:16:38.99:339,39,0	1/1:3,16:19:50.97:440,51,0	1/1:1,12:13:35.99:313,36,0	1/1:2,19:21:50.99:443,51,0	0/0:20,0:20:57.14:0,57,623	0/0:18,0:19:50.97:0,51,545	1/1:0,10:10:26.99:234,27,0	1/1:2,17:19:44.99:391,45,0	1/1:0,15:15:41.99:365,42,0	1/1:1,13:14:29.99:260,30,0	1/1:3,21:24:59.89:505,60,0	1/1:1,9:10:26.99:234,27,0	1/1:3,14:17:32.99:287,33,0	1/1:1,13:14:35.99:312,36,0	1/1:1,13:14:35.99:313,36,0	1/1:1,3:4:6:52,6,0	1/1:1,10:11:29.99:260,30,0	1/1:4,21:26:62.02:526,62,0	1/1:1,23:23:65.99:573,66,0	1/1:0,19:19:56.99:495,57,0
chr10	39839357	.	TAC	T	8906.68	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=11.798;DP=652;FS=0.000;HRun=0;HaplotypeScore=138.7463;InbreedingCoeff=0.9624;MQ=63.00;MQ0=1;MQRankSum=1.125;QD=26.12;ReadPosRankSum=2.597;VQSLOD=5.8898;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:75.26:0,75,1266	0/0:9,0:9:27.09:0,27,449	0/0:14,0:10:9.51:0,10,200	0/0:9,0:7:1.61:0,2,64	0/0:26,0:26:75.21:0,75,1193	1/1:2,16:18:36.12:468,36,0	1/1:2,13:15:20.66:272,21,0	1/1:12,21:33:63.14:744,63,0	1/1:3,24:27:51.17:663,51,0	0/0:30,0:30:87.27:0,87,1378	0/0:20,0:20:57.18:0,57,938	1/1:3,23:26:60.19:779,60,0	0/0:31,0:31:81.25:0,81,1316	0/0:22,0:22:60.18:0,60,992	0/0:34,0:34:90.29:0,90,1496	0/0:30,0:30:81.24:0,81,1291	0/0:27,0:27:66.23:0,66,1101	0/0:9,0:9:24.06:0,24,381	1/1:3,14:17:42.07:486,42,0	1/1:2,22:24:51.17:660,51,0	1/1:1,19:20:36.12:468,36,0	0/0:18,0:18:54.12:0,54,795	1/1:2,19:21:44.73:558,45,0	1/1:2,12:14:27.09:351,27,0	1/1:3,31:34:54.17:691,54,0	1/1:4,25:29:75.21:940,75,0	1/1:5,39:44:84.24:1086,84,0	1/1:0,19:19:57.19:740,57,0
chr10	39842222	.	TTTTG	T	16419.67	PASS	AC=44;AF=0.815;AN=54;BaseQRankSum=9.131;DP=692;FS=2.410;HRun=0;HaplotypeScore=121.2091;InbreedingCoeff=0.9904;MQ=66.62;MQ0=4;MQRankSum=-1.493;QD=30.52;ReadPosRankSum=4.217;VQSLOD=5.0680;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:43:93.31:0,93,2152	1/1:3,11:13:21.07:334,21,0	0/0:33,0:30:56.26:0,56,1044	0/0:15,0:13:21.41:0,21,378	1/1:5,25:30:72.20:1126,72,0	1/1:2,18:19:36.12:602,36,0	1/1:6,15:21:30.10:502,30,0	1/1:10,18:27:54.15:813,54,0	1/1:5,23:28:38.03:854,38,0	1/1:6,9:15:26.45:401,26,0	1/1:2,18:20:42.04:601,42,0	1/1:4,24:28:54.05:792,54,0	0/0:31,0:31:72.24:0,72,1700	0/0:24,1:25:13.02:0,13,1355	1/1:4,25:29:48.13:774,48,0	1/1:2,25:26:60.14:931,60,0	1/1:5,23:28:51.17:853,51,0	1/1:9,27:36:56.82:884,57,0	1/1:6,21:27:60.16:928,60,0	1/1:1,20:21:60.05:899,60,0	1/1:7,23:30:39.09:622,39,0	1/1:4,15:19:42.06:629,42,0	1/1:2,14:16:23.91:401,24,0	1/1:3,23:26:48.16:803,48,0	1/1:3,7:10:21.07:351,21,0	1/1:6,20:26:60.19:976,60,0	1/1:3,36:39:83.30:1344,83,0	./.
chr10	39844548	.	GTC	G	9572.50	PASS	AB=0.906;AC=42;AF=0.750;AN=56;BaseQRankSum=-0.470;DP=623;FS=1.304;HRun=0;HaplotypeScore=87.1457;InbreedingCoeff=0.7500;MQ=75.12;MQ0=9;MQRankSum=-0.558;QD=20.32;ReadPosRankSum=4.055;VQSLOD=5.1495;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,29:36:78.24:946,78,0	1/1:1,7:8:21.06:255,21,0	0/0:60,0:37:8.08:0,8,833	0/1:66,1:25:14.30:14,0,289	1/1:2,14:16:36.11:437,36,0	0/0:27,0:27:2.49:0,2,676	0/0:19,0:19:39.09:0,39,407	1/1:9,12:21:36.10:421,36,0	0/0:13,0:13:27.07:0,27,290	1/1:5,14:19:42.13:509,42,0	1/1:6,7:13:18.06:218,18,0	0/1:17,3:21:71.64:72,0,645	1/1:2,11:13:27.08:328,27,0	1/1:3,18:21:48.15:582,48,0	1/1:4,22:26:60.18:726,60,0	1/1:2,11:14:29.92:342,30,0	1/1:8,18:27:44.97:523,45,0	1/1:3,7:10:21.06:255,21,0	1/1:9,5:14:15.04:178,15,0	1/1:6,16:23:50.99:596,51,0	1/1:5,14:19:21.21:452,21,0	1/1:1,7:8:15.05:182,15,0	0/0:13,0:13:18.60:0,19,445	0/0:19,0:19:48.15:0,48,740	1/1:5,16:21:44.81:521,45,0	1/1:6,15:21:45.14:545,45,0	1/1:3,20:24:60.01:706,60,0	1/1:5,22:27:63.19:764,63,0
chr10	39845135	.	A	AT	7494.02	PASS	AB=0.917;AC=19;AF=0.339;AN=56;BaseQRankSum=2.536;DP=680;FS=1.341;HRun=7;HaplotypeScore=84.5148;InbreedingCoeff=0.9334;MQ=78.44;MQ0=0;MQRankSum=-0.994;QD=29.05;ReadPosRankSum=2.006;VQSLOD=5.2611;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:63.10:0,63,608	1/1:2,9:11:18.06:217,18,0	0/0:19,0:19:51.06:0,51,483	0/0:11,0:11:33.02:0,33,307	1/1:4,28:32:84.26:1015,84,0	0/0:28,0:28:78.12:0,78,753	0/0:19,0:19:45.04:0,45,423	0/0:50,0:50:99:0,132,1261	0/0:18,0:18:51.07:0,51,486	1/1:2,36:38:99:1235,105,0	1/1:0,24:24:63.19:761,63,0	0/0:25,0:25:63.09:0,63,605	0/0:31,0:31:90.13:0,90,863	0/0:21,0:21:63.10:0,63,608	1/1:1,28:29:81.25:978,81,0	1/1:2,34:36:96.29:1160,96,0	1/1:0,23:23:69.21:834,69,0	1/1:1,13:14:39.12:471,39,0	0/0:16,0:16:42.06:0,42,405	0/0:37,0:37:99:0,99,954	0/0:16,0:16:36.05:0,36,348	1/1:3,26:29:69.17:817,69,0	0/0:20,0:20:60.10:0,60,579	0/0:13,0:13:36.06:0,36,348	0/0:31,0:30:81.08:0,81,771	0/1:20,2:22:6.38:6,0,513	0/0:36,0:36:99:0,105,1014	0/0:9,0:9:27.02:0,27,254
chr10	39845782	.	GA	G	7372.30	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=6.430;DP=640;FS=4.759;HRun=10;HaplotypeScore=79.2585;InbreedingCoeff=0.9754;MQ=74.68;MQ0=0;MQRankSum=0.156;QD=21.75;ReadPosRankSum=3.212;VQSLOD=5.8105;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:3,0:29:68.55:0,69,379	1/1:2,8:10:23.99:208,24,0	0/0:20,0:18:9.25:0,9,160	0/0:15,0:11:5.70:0,6,99	1/1:4,24:28:62.97:547,63,0	1/1:3,32:35:77.98:677,78,0	1/1:5,17:22:28.75:418,29,0	0/0:40,0:40:90.22:0,90,977	1/1:0,13:14:38.03:319,38,0	1/1:3,23:26:65.97:573,66,0	1/1:1,18:19:47.98:417,48,0	1/1:2,31:33:92.98:807,93,0	0/0:3,0:17:39.77:0,40,198	0/0:4,0:19:51.67:0,52,298	1/1:2,29:31:74.98:651,75,0	1/1:3,18:21:53.98:468,54,0	1/1:3,26:29:71.98:625,72,0	1/1:3,10:13:29.98:258,30,0	0/0:25,0:25:66.16:0,66,721	0/0:27,1:28:52.16:0,52,804	0/0:11,0:11:30.05:0,30,315	1/1:0,17:17:50.99:442,51,0	1/1:1,27:28:80.98:703,81,0	1/1:2,11:13:29.99:260,30,0	0/0:27,0:27:69.13:0,69,739	0/0:29,0:29:66.14:0,66,717	0/0:33,0:35:96.04:0,96,1015	0/0:6,0:6:18.05:0,18,199
chr10	39846004	.	TGGAGAG	T	16046.15	PASS	AB=1.000;AC=47;AF=0.839;AN=56;BaseQRankSum=10.360;DP=693;FS=14.173;HRun=0;HaplotypeScore=168.0476;InbreedingCoeff=0.8062;MQ=63.59;MQ0=7;MQRankSum=-11.509;QD=28.50;ReadPosRankSum=0.971;VQSLOD=4.0250;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:82.21:0,82,2800	1/1:1,3:4:9.03:191,9,0	0/1:33,0:26:10.64:11,0,317	0/0:38,0:32:39.40:0,39,918	1/1:1,20:21:33.07:623,33,0	1/1:7,16:23:20.43:625,20,0	1/1:9,22:31:54.19:1146,54,0	1/1:11,18:29:48.12:935,48,0	1/1:7,17:24:39.13:828,39,0	1/1:7,13:20:42.11:812,42,0	1/1:4,16:20:24.08:509,24,0	1/1:7,19:26:39.13:828,39,0	0/0:24,0:24:54.17:0,54,1649	0/0:25,0:25:66.23:0,66,2050	1/1:13,23:35:54.19:1146,54,0	1/1:4,32:36:93.32:1968,93,0	1/1:11,8:19:27.02:505,27,0	1/1:5,9:14:12.04:255,12,0	1/1:10,9:19:30.05:498,30,0	1/1:10,17:26:30.10:637,30,0	1/1:7,18:24:6.49:125,6,0	1/1:6,6:12:15.05:319,15,0	1/1:9,14:23:24.08:509,24,0	1/1:8,7:15:6.02:127,6,0	1/1:12,20:31:42.14:876,42,0	1/1:7,27:34:75.18:1410,75,0	1/1:7,20:26:41.99:891,42,0	1/1:4,9:12:14.98:273,15,0
chr10	39846451	.	A	ATTCT	10186.08	PASS	AB=0.600;AC=45;AF=0.804;AN=56;BaseQRankSum=1.608;DP=625;FS=4.840;HRun=0;HaplotypeScore=167.8059;InbreedingCoeff=0.8206;MQ=63.14;MQ0=0;MQRankSum=-4.162;QD=20.54;ReadPosRankSum=-2.097;VQSLOD=3.9833;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:42:95.51:0,96,783	1/1:6,0:6:8.85:113,9,0	0/0:22,0:14:28.88:0,29,261	0/0:14,0:10:0.57:0,1,229	1/1:13,0:30:30.33:449,30,0	1/1:5,11:25:39.05:748,39,0	1/1:5,1:21:6.18:282,6,0	1/1:12,0:40:98.91:1075,99,0	1/1:6,1:12:18.38:220,18,0	1/1:14,0:32:71.24:830,71,0	1/1:6,0:6:15.38:176,15,0	1/1:9,0:28:30.43:411,30,0	0/0:7,0:24:49.97:0,50,468	0/0:8,0:27:33:0,33,305	1/1:23,0:23:43.68:596,44,0	1/1:22,0:31:68.58:692,69,0	1/1:5,0:21:14.26:212,14,0	1/1:14,0:14:27.07:279,27,0	1/1:3,0:16:36.81:475,37,0	1/1:10,0:24:41.86:489,42,0	1/1:5,0:19:17.79:216,18,0	1/1:6,0:19:35.73:414,36,0	1/1:3,1:20:30.05:511,30,0	1/1:8,0:19:24.68:228,25,0	1/1:10,0:20:36.08:389,36,0	1/1:8,0:33:76.19:934,76,0	1/1:5,0:27:18.68:281,19,0	0/1:2,0:6:2.62:167,0,3
chr10	39846452	.	T	TTC	6187.95	PASS	AB=0.857;AC=45;AF=0.804;AN=56;BaseQRankSum=1.514;DP=606;FS=0.897;HRun=0;HaplotypeScore=165.9944;InbreedingCoeff=0.7913;MQ=62.83;MQ0=0;MQRankSum=-3.550;QD=12.95;ReadPosRankSum=2.357;VQSLOD=4.6916;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:84.04:0,84,569	1/1:6,0:6:8.42:92,8,0	0/0:23,0:14:29.26:0,29,238	0/0:14,0:10:23.56:0,24,254	1/1:29,0:28:2.06:164,2,0	1/1:23,0:23:36.52:350,37,0	1/1:19,0:19:5.11:131,5,0	1/1:38,0:38:53.56:856,54,0	1/1:13,0:12:13.94:133,14,0	1/1:30,0:30:49.87:405,50,0	1/1:2,2:6:8.97:97,9,0	1/1:26,0:26:24.67:168,25,0	0/0:24,0:24:37.15:0,37,332	0/0:25,0:25:32.39:0,32,241	1/1:23,0:23:23.97:267,24,0	1/1:30,0:30:35.10:343,35,0	1/1:20,0:19:7.74:102,8,0	1/1:14,0:14:7.97:92,8,0	1/1:15,0:15:33.56:355,34,0	1/1:23,1:23:25.09:421,25,0	1/1:19,0:19:17.33:172,17,0	1/1:18,0:18:24.30:157,24,0	1/1:19,0:19:23.90:227,24,0	1/1:19,0:19:23.80:168,24,0	1/1:18,2:20:32.13:369,32,0	1/1:32,1:33:11.10:703,11,0	1/1:27,1:28:25.05:258,25,0	0/1:5,1:6:2.89:159,0,3
chr10	39847516	.	CTT	C	1242.32	PASS	AB=0.889;AC=21;AF=0.375;AN=56;BaseQRankSum=-5.350;DP=430;FS=2.038;HRun=14;HaplotypeScore=59.7317;InbreedingCoeff=0.5942;MQ=75.74;MQ0=10;MQRankSum=1.699;QD=7.62;ReadPosRankSum=4.880;VQSLOD=0.1406;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:16:38.49:0,38,356	1/1:1,4:4:2.98:28,3,0	0/1:35,0:16:21.81:22,0,58	0/0:31,0:10:17.98:0,18,145	1/1:3,12:15:26.75:234,27,0	0/1:13,0:13:5.76:6,0,19	0/0:8,0:10:4.06:0,4,25	0/0:25,0:25:31.64:0,32,137	0/0:12,0:12:1.25:0,1,3	1/1:11,3:14:18.37:165,18,0	1/1:2,2:4:5.98:55,6,0	0/0:22,0:21:5.81:0,6,52	0/0:18,0:19:46.66:0,47,438	0/0:15,0:16:33.07:0,33,397	1/1:6,10:16:8.90:83,9,0	0/1:4,5:10:16.81:40,0,17	1/1:10,6:18:23.49:277,23,0	1/1:2,17:19:38.62:343,39,0	0/0:27,0:27:34.36:0,34,206	0/0:8,0:8:10.46:0,10,48	0/0:4,0:4:6:0,6,61	1/1:2,8:9:18.01:166,18,0	0/0:20,0:20:11.78:0,12,82	1/1:4,0:4:2.67:11,3,0	0/0:8,0:8:0.47:0,0,1	0/0:21,0:22:30.95:0,31,146	0/0:17,0:18:16.90:0,17,108	0/0:7,0:7:8.22:0,8,42
chr10	39847529	.	TTC	T	3037.48	PASS	AB=1.000;AC=44;AF=0.786;AN=56;BaseQRankSum=-1.229;DP=509;FS=21.259;HRun=0;HaplotypeScore=68.1811;InbreedingCoeff=0.3468;MQ=59.90;MQ0=20;MQRankSum=-1.205;QD=6.90;ReadPosRankSum=-2.527;VQSLOD=0.5955;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:19,0:18:17.77:18,0,252	1/1:10,0:8:5.10:33,5,0	0/1:35,0:9:36.97:37,0,58	0/1:37,0:10:8.24:8,0,63	1/1:18,0:18:27.25:164,27,0	1/1:17,1:18:3.01:38,3,0	1/1:12,0:12:33.53:240,34,0	1/1:27,0:25:36.30:224,36,0	1/1:13,0:13:5.85:34,6,0	1/1:18,0:18:12.93:167,13,0	1/1:10,0:10:12.43:147,12,0	0/0:24,0:23:2.17:0,2,23	0/0:20,0:19:39.94:0,40,345	0/0:16,0:16:38.65:0,39,264	1/1:18,0:18:12.85:169,13,0	0/1:14,0:14:1.92:99,0,2	1/1:32,0:32:65.85:452,66,0	1/1:30,0:28:0.61:137,1,0	1/1:19,0:19:3.99:150,4,0	1/1:10,0:10:21.91:157,22,0	0/0:9,0:8:3:0,3,25	1/1:12,0:11:7.70:68,8,0	1/1:17,0:18:14.18:89,14,0	1/1:0,6:6:3.01:38,3,0	1/1:11,0:11:2.97:20,3,0	1/1:26,0:25:60.18:386,60,0	1/1:18,0:17:31.36:208,31,0	1/1:9,0:8:16.65:109,17,0
chr10	39847530	.	TCTTTC	T	4518.27	PASS	AB=0.957;AC=36;AF=0.643;AN=56;BaseQRankSum=-7.511;DP=504;FS=5.253;HRun=0;HaplotypeScore=81.2313;InbreedingCoeff=-0.0762;MQ=57.81;MQ0=20;MQRankSum=-0.381;QD=10.39;ReadPosRankSum=-4.342;VQSLOD=1.7917;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:19,0:18:71.68:72,0,521	0/1:10,0:8:21.64:35,0,22	0/1:30,0:8:20.35:20,0,89	0/1:33,0:9:49.65:50,0,65	0/1:19,0:19:73.70:117,0,74	1/1:18,0:18:2.90:16,3,0	1/1:12,0:12:7.95:274,8,0	1/1:26,0:24:42.59:447,43,0	1/1:13,0:13:5.65:32,6,0	0/1:7,11:18:70.50:159,0,70	0/1:10,0:10:36.28:239,0,36	0/0:24,0:23:1.47:0,1,21	0/0:19,0:19:22.61:0,23,648	0/0:16,0:16:35.27:0,35,525	0/1:18,0:18:34.72:194,0,35	0/1:14,0:14:30.86:138,0,31	0/1:32,0:32:8.17:535,0,8	0/1:30,0:28:99:160,0,174	1/1:19,0:19:23.88:359,24,0	1/1:10,0:10:26.02:299,26,0	0/0:2,0:8:2.99:0,3,23	0/1:12,0:11:51.27:51,0,56	1/1:17,0:17:14.27:141,14,0	1/1:6,0:6:2.88:15,3,0	1/1:11,0:11:2.94:18,3,0	1/1:27,0:26:67.79:686,68,0	1/1:16,0:15:30.53:328,31,0	1/1:9,0:8:17.77:132,18,0
chr10	39848391	.	T	TC	5015.77	PASS	AC=12;AF=0.222;AN=54;BaseQRankSum=-11.443;DP=471;FS=0.000;HRun=1;HaplotypeScore=50.6125;InbreedingCoeff=0.9375;MQ=81.29;MQ0=0;MQRankSum=-1.010;QD=40.45;ReadPosRankSum=3.113;VQSLOD=5.2041;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:30:81.26:0,81,1051	0/0:4,0:4:12.04:0,12,156	0/0:9,0:9:27.01:0,27,296	0/0:17,0:17:43.39:0,43,520	0/0:4,0:4:9.03:0,9,117	1/1:0,5:5:12.04:180,12,0	1/1:2,39:41:99:1573,105,0	0/0:15,0:15:45.15:0,45,584	1/1:0,4:4:12.04:180,12,0	0/0:12,0:12:36.01:0,36,427	./.	1/1:2,26:29:84.26:1228,84,0	0/0:14,0:14:36.12:0,36,464	0/0:20,0:20:60.19:0,60,776	0/0:6,0:6:15.05:0,15,195	0/0:11,0:11:33.11:0,33,428	0/0:31,0:31:93.25:0,93,1174	0/0:28,0:28:84.27:0,84,1090	0/0:10,0:10:27.09:0,27,350	0/0:3,0:3:9.02:0,9,103	0/0:84,0:84:99:0,247,3130	0/0:5,0:5:14.84:0,15,169	1/1:0,7:7:17.89:238,18,0	1/1:2,36:37:99:1618,108,0	0/0:10,0:10:30.10:0,30,387	0/0:13,0:13:39.12:0,39,492	0/0:12,0:12:36.05:0,36,444	0/0:6,0:6:9.03:0,9,117
chr10	39848699	.	C	CGTGT	2758.07	PASS	AB=1.000;AC=41;AF=0.788;AN=52;BaseQRankSum=-2.312;DP=700;FS=1.030;HRun=0;HaplotypeScore=146.3203;InbreedingCoeff=0.4372;MQ=70.10;MQ0=13;MQRankSum=-0.581;QD=5.35;ReadPosRankSum=-3.071;VQSLOD=2.0974;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:32:3.01:0,3,34	1/1:5,2:6:3.01:70,3,0	./.	./.	1/1:14,4:18:3.01:71,3,0	1/1:23,0:22:11.97:105,12,0	0/1:31,0:31:18.15:117,0,18	1/1:33,0:32:21.97:229,22,0	0/0:25,0:24:15.96:0,16,125	1/1:31,0:31:14.64:155,15,0	1/1:7,3:11:3.01:70,3,0	1/1:26,0:26:15.93:207,16,0	0/0:16,0:16:3.01:0,3,34	0/0:23,0:37:20.91:0,21,192	1/1:21,6:30:11.51:165,12,0	1/1:16,1:30:15.05:295,15,0	0/1:31,0:31:28.41:260,0,28	1/1:14,0:22:14.07:97,14,0	1/1:22,0:20:9.91:124,10,0	1/1:17,0:16:6:56,6,0	1/1:29,0:27:8.61:73,9,0	1/1:20,0:20:2.50:9,2,0	0/1:16,0:16:0:0,0,0	1/1:51,0:49:24.63:244,25,0	1/1:12,0:11:6:58,6,0	1/1:24,0:22:18:177,18,0	1/1:22,0:21:23.14:230,23,0	1/1:9,0:8:6.02:93,6,0
chr10	39851027	.	CT	C	1256.34	PASS	AB=0.866;AC=20;AF=0.357;AN=56;BaseQRankSum=5.111;DP=534;FS=2.080;HRun=12;HaplotypeScore=58.8065;InbreedingCoeff=0.3866;MQ=54.86;MQ0=21;MQRankSum=0.306;QD=6.38;ReadPosRankSum=3.708;VQSLOD=1.8798;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:32.90:0,33,322	0/1:4,1:5:11.21:11,0,79	1/1:12,0:6:1.54:4,2,0	0/0:9,0:2:3.01:0,3,30	0/0:25,1:27:21.67:0,22,381	1/1:3,13:16:35.86:278,36,0	1/1:2,7:7:17.91:136,18,0	0/1:24,3:24:21.62:22,0,342	1/1:1,9:11:28.93:215,29,0	0/0:23,2:24:3.45:0,3,384	0/1:14,2:16:4.60:5,0,297	1/1:4,15:19:32.84:252,33,0	0/1:14,2:16:19.47:19,0,153	0/0:17,0:19:28.67:0,29,344	0/0:20,2:20:1.61:0,2,366	0/0:18,2:20:1.52:0,2,349	0/0:35,1:33:30.68:0,31,449	0/0:29,2:30:4.18:0,4,379	0/0:22,2:25:1.27:0,1,335	0/0:23,1:24:15.77:0,16,317	0/0:18,0:17:33.05:0,33,328	0/1:9,4:12:42.59:43,0,135	1/1:4,7:11:16.94:122,17,0	1/1:3,14:15:41.82:325,42,0	0/0:14,1:16:13.27:0,13,324	0/1:22,2:22:4.37:4,0,312	0/0:31,1:31:48.80:0,49,650	0/0:9,0:8:15.02:0,15,147
chr10	39851196	.	A	ATG	7081.76	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-14.888;DP=727;FS=18.896;HRun=0;HaplotypeScore=85.3310;InbreedingCoeff=0.9926;MQ=69.30;MQ0=2;MQRankSum=-1.677;QD=34.38;ReadPosRankSum=0.793;VQSLOD=4.9565;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,126,1561	0/0:11,0:11:24.06:0,24,285	0/0:30,0:28:51.87:0,52,609	0/0:20,0:19:39.10:0,39,475	0/0:25,0:25:72.23:0,72,892	0/0:22,0:22:54.17:0,54,669	0/0:27,0:27:66.19:0,66,804	1/1:11,27:39:85.49:1307,85,0	0/0:21,0:21:54.17:0,54,669	0/0:34,0:34:84.23:0,84,1016	0/0:16,0:16:36.10:0,36,433	0/0:28,0:28:66.21:0,66,818	0/0:32,0:33:88.50:0,89,1066	0/0:23,0:23:54.16:0,54,656	0/0:23,0:23:57.17:0,57,694	0/0:26,0:26:66.19:0,66,805	0/0:29,0:31:71.72:0,72,823	0/0:17,0:17:45.14:0,45,557	1/1:8,14:22:39.13:640,39,0	1/1:3,26:30:72.25:1180,72,0	1/1:8,22:30:29.04:996,29,0	0/0:17,0:17:51.15:0,51,620	0/0:19,0:19:51.16:0,51,631	0/0:44,0:44:99:0,117,1435	1/1:7,23:29:60.20:984,60,0	1/1:4,17:21:16.98:800,17,0	1/1:7,21:28:60.20:982,60,0	1/1:1,4:5:12.04:194,12,0
chr10	39853300	.	G	GT	9650.52	PASS	AB=0.905;AC=30;AF=0.536;AN=56;BaseQRankSum=-10.793;DP=598;FS=6.513;HRun=2;HaplotypeScore=72.9393;InbreedingCoeff=0.8460;MQ=76.33;MQ0=0;MQRankSum=-3.602;QD=30.16;ReadPosRankSum=-0.992;VQSLOD=3.7591;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,126,1504	0/0:7,0:7:21.07:0,21,260	0/1:37,5:37:21.33:21,0,759	0/1:28,2:30:41.11:41,0,579	0/0:18,0:18:48.15:0,48,594	1/1:2,7:9:24.08:342,24,0	1/1:1,7:8:21.07:302,21,0	1/1:1,20:20:54.18:776,54,0	1/1:3,8:11:30.09:405,30,0	0/0:18,0:18:48.13:0,48,568	0/0:10,0:10:30.09:0,30,372	1/1:0,23:23:69.16:967,69,0	0/0:23,0:23:63.06:0,63,757	0/0:27,0:27:75.22:0,75,917	0/0:21,0:21:63.19:0,63,768	0/0:24,0:24:69.19:0,69,828	0/0:43,0:43:99:0,129,1584	0/0:27,0:27:72.22:0,72,892	1/1:1,19:20:54.16:748,54,0	1/1:1,11:12:33.02:428,33,0	1/1:0,49:49:99:2030,141,0	0/0:17,0:17:51.16:0,51,632	1/1:1,3:4:9.03:129,9,0	1/1:2,8:10:17.09:222,17,0	1/1:0,10:9:30.10:432,30,0	1/1:1,26:27:78.26:1122,78,0	1/1:0,29:29:84.28:1209,84,0	1/1:0,12:12:33.11:475,33,0
chr10	39853319	.	C	CGGGGGT	2168.43	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=0.750;DP=538;FS=2.619;HRun=0;HaplotypeScore=143.3449;InbreedingCoeff=0.8564;MQ=79.09;MQ0=0;MQRankSum=-7.322;QD=37.39;ReadPosRankSum=-2.920;VQSLOD=3.2801;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,105,2164	0/0:8,0:8:9.03:0,9,190	0/0:34,0:30:25.08:0,25,329	0/0:26,0:22:11.84:0,12,208	0/0:18,0:18:39.13:0,39,822	1/1:4,4:9:18.05:449,18,0	1/1:4,2:6:6.02:198,6,0	0/0:16,0:15:9.02:0,9,113	1/1:6,5:11:15.05:496,15,0	0/0:19,0:19:33.11:0,33,696	0/0:6,0:6:12.04:0,12,239	1/1:18,5:23:36.12:1083,36,0	0/0:25,0:25:51.17:0,51,1042	0/0:23,0:23:57.20:0,57,1183	0/0:21,0:21:42.14:0,42,886	0/0:24,0:24:51.16:0,51,1023	0/0:40,0:40:84.25:0,84,1704	0/0:27,0:27:54.19:0,54,1134	0/0:24,0:24:45.14:0,45,891	0/0:12,0:12:24.07:0,24,466	0/0:39,0:39:60.16:0,60,1221	0/0:16,0:16:36.12:0,36,745	1/1:1,1:2:3.01:99,3,0	1/1:6,1:7:1.72:4,2,0	0/0:8,0:8:18.06:0,18,380	0/0:25,0:25:54.19:0,54,1139	0/0:24,0:24:48.16:0,48,996	0/0:9,0:9:21.07:0,21,443
chr10	39855139	.	G	GA	1553.75	PASS	AB=0.899;AC=19;AF=0.339;AN=56;BaseQRankSum=-0.069;DP=433;FS=21.795;HRun=12;HaplotypeScore=55.2310;InbreedingCoeff=0.5200;MQ=57.38;MQ0=16;MQRankSum=2.016;QD=7.19;ReadPosRankSum=0.704;VQSLOD=0.5000;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:14,1:15:2.86:0,3,136	1/1:2,6:8:17.97:175,18,0	0/0:59,0:13:3.68:0,4,35	0/1:70,1:13:8.20:8,0,21	1/1:12,11:24:46.41:416,46,0	0/0:6,0:19:22.40:0,22,66	0/0:4,0:10:12.22:0,12,36	0/0:29,0:29:38.58:0,39,282	0/0:0,0:5:6.11:0,6,18	1/1:4,8:12:15.91:148,16,0	1/1:3,11:13:36.06:350,36,0	0/0:2,0:6:8.06:0,8,24	0/0:4,0:4:5.22:0,5,43	0/0:4,0:4:8.92:0,9,65	1/1:4,5:8:17.90:161,18,0	1/1:4,5:9:15.02:146,15,0	1/1:7,14:18:5.15:212,5,0	0/1:6,7:12:4.42:85,0,4	0/1:11,1:11:31.06:31,0,126	0/0:9,0:9:13.48:0,13,91	0/0:1,0:1:2.98:0,3,22	0/1:2,0:1:0:0,0,0	0/0:1,0:4:6.11:0,6,18	0/0:3,0:6:6.10:0,6,18	0/0:19,0:19:31.66:0,32,238	0/1:18,1:19:1.34:1,0,166	0/0:15,0:15:20.26:0,20,159	0/0:8,0:6:3.36:0,3,40
chr10	39855597	.	G	GT	5921.20	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-15.663;DP=744;FS=0.713;HRun=3;HaplotypeScore=74.1174;InbreedingCoeff=0.9880;MQ=86.67;MQ0=1;MQRankSum=-1.051;QD=35.67;ReadPosRankSum=1.281;VQSLOD=5.4457;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,110,1266	0/0:3,0:3:9.03:0,9,108	0/0:23,0:23:44.25:0,44,643	0/0:30,0:29:58.69:0,59,849	0/0:24,0:24:57.17:0,57,684	1/1:1,23:24:69.23:966,69,0	1/1:2,23:25:54.18:756,54,0	0/0:37,0:37:99:0,105,1222	1/1:4,27:31:75.25:1050,75,0	0/0:24,0:24:60.18:0,60,712	0/0:20,0:20:57.17:0,57,684	1/1:0,38:38:99:1490,108,0	0/0:30,0:30:87.25:0,87,1032	0/0:28,0:28:75.19:0,75,864	0/0:27,0:27:78.23:0,78,925	0/0:34,0:34:99:0,102,1203	0/0:27,0:27:78.21:0,78,922	0/0:16,0:16:42.13:0,42,504	0/0:26,0:26:75.21:0,75,886	0/0:30,0:30:81.25:0,81,971	0/0:57,0:56:99:0,162,1907	0/0:18,0:18:48.13:0,48,565	1/1:1,14:15:32.90:462,33,0	1/1:0,33:33:87.25:1196,87,0	0/0:22,0:22:66.17:0,66,758	0/0:23,0:23:69.21:0,69,828	0/0:32,0:32:87.08:0,87,1006	0/0:9,0:9:27.08:0,27,324
chr10	39856323	.	CA	C	8000.53	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=13.194;DP=637;FS=9.905;HRun=7;HaplotypeScore=62.3860;InbreedingCoeff=0.9400;MQ=80.62;MQ0=0;MQRankSum=1.427;QD=25.32;ReadPosRankSum=-0.061;VQSLOD=4.9128;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,108,1358	0/0:9,0:9:21.07:0,21,264	0/1:13,0:13:2.21:2,0,188	0/0:21,0:21:23.38:0,23,460	0/0:27,0:27:75.23:0,75,931	1/1:0,23:23:60.14:612,60,0	1/1:1,11:12:33.07:337,33,0	1/1:2,22:24:66.14:667,66,0	1/1:1,12:13:33.07:337,33,0	0/0:24,0:24:66.21:0,66,830	0/0:17,0:17:48.15:0,48,604	1/1:1,28:29:75.17:765,75,0	0/0:35,0:35:90.26:0,90,1105	0/0:29,0:29:72.19:0,72,887	0/0:32,0:32:93.30:0,93,1170	0/0:31,0:30:87.28:0,87,1091	0/0:23,0:23:63.18:0,63,766	0/0:12,0:12:27.09:0,27,340	1/1:3,15:18:45.06:445,45,0	1/1:3,22:25:60.13:612,60,0	1/1:2,29:31:84.19:857,84,0	0/0:18,0:18:54.17:0,54,679	1/1:4,19:23:57.12:581,57,0	1/1:2,24:26:63.14:643,63,0	1/1:3,23:26:57.12:582,57,0	1/1:1,16:17:48.11:490,48,0	1/1:0,34:34:99:1010,99,0	1/1:0,2:2:6.01:61,6,0
chr10	39857549	.	G	GA	6377.79	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-15.871;DP=569;FS=3.558;HRun=5;HaplotypeScore=49.2115;InbreedingCoeff=0.9828;MQ=80.95;MQ0=0;MQRankSum=0.083;QD=33.39;ReadPosRankSum=-1.017;VQSLOD=4.8576;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:51.13:0,51,548	0/0:6,0:6:18.05:0,18,193	0/0:21,0:21:39.11:0,39,534	0/0:10,0:10:24.06:0,24,253	0/0:33,0:33:93.23:0,93,999	0/0:18,0:18:54.07:0,54,552	0/0:19,0:19:57.14:0,57,613	1/1:4,33:37:96.30:1247,96,0	0/0:23,0:23:60.15:0,60,645	0/0:20,0:20:57.14:0,57,609	0/0:24,0:24:63.16:0,63,677	0/0:30,0:30:81.20:0,81,871	0/0:17,0:17:45.11:0,45,483	0/0:16,0:16:39.10:0,39,419	0/0:19,0:19:54.12:0,54,572	0/0:20,0:19:54.13:0,54,580	0/0:21,0:21:57.14:0,57,612	0/0:12,0:12:21.05:0,21,224	1/1:0,17:17:51.17:671,51,0	1/1:5,37:42:99:1341,102,0	1/1:0,16:16:45.15:592,45,0	0/0:21,0:21:60.15:0,60,645	0/0:23,0:23:63.16:0,63,677	0/0:5,0:5:9.02:0,9,97	1/1:2,17:19:45.15:592,45,0	1/1:3,20:23:60.20:790,60,0	1/1:1,30:31:75.22:987,75,0	1/1:1,5:6:12.04:158,12,0
chr10	39858028	.	A	AAAAC	5037	PASS	AB=0.749;AC=18;AF=0.321;AN=56;BaseQRankSum=-9.486;DP=512;FS=0.000;HRun=0;HaplotypeScore=94.1423;InbreedingCoeff=0.7699;MQ=60.04;MQ0=0;MQRankSum=0.582;QD=26.37;ReadPosRankSum=2.868;VQSLOD=4.7155;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:40.94:0,41,557	1/1:2,5:7:14.94:188,15,0	0/0:16,0:8:11.98:0,12,115	0/0:14,0:3:2.80:0,3,13	1/1:9,22:30:42.05:1194,42,0	0/0:17,0:17:23.92:0,24,215	0/0:12,0:12:20.89:0,21,156	0/0:37,0:35:69.93:0,70,723	0/0:15,0:15:33.20:0,33,258	1/1:7,14:21:41.72:835,42,0	1/1:6,14:20:31.66:645,32,0	0/0:13,0:13:11.49:0,11,99	0/0:30,0:30:74.81:0,75,876	0/0:17,0:17:45.06:0,45,624	1/1:10,11:23:30.24:659,30,0	1/1:8,15:23:16.34:504,16,0	1/1:4,5:12:7.50:88,8,0	0/1:3,8:11:20.41:350,0,20	0/0:13,0:12:27.16:0,27,372	0/0:25,0:25:55.37:0,55,656	0/0:10,0:10:15.03:0,15,192	1/1:4,11:19:26.89:479,27,0	0/0:12,0:12:14.71:0,15,138	0/0:11,0:11:12.82:0,13,82	0/0:22,0:22:53.98:0,54,643	0/1:21,2:23:95.65:96,0,516	0/0:23,0:22:11.65:0,12,351	0/0:11,0:11:29.80:0,30,314
chr10	39858032	.	CA	C	1456.01	PASS	AB=0.659;AC=12;AF=0.214;AN=56;BaseQRankSum=-5.679;DP=517;FS=2.680;HRun=13;HaplotypeScore=84.5566;InbreedingCoeff=0.3661;MQ=62.21;MQ0=0;MQRankSum=1.872;QD=8.51;ReadPosRankSum=1.303;VQSLOD=3.1319;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:21:47.68:0,48,397	0/1:7,1:8:12.46:12,0,32	0/0:15,0:8:10.62:0,11,82	0/0:14,0:4:3.45:0,3,23	0/0:28,0:29:51.36:0,51,326	0/0:5,0:16:17.21:0,17,100	0/0:2,0:13:17.04:0,17,85	1/1:17,17:33:35.32:356,35,0	0/0:9,0:13:20.74:0,21,122	0/0:18,0:19:43.14:0,43,243	0/0:23,0:23:37.20:0,37,191	0/0:5,0:14:11.17:0,11,76	0/0:29,0:30:31.86:0,32,464	0/0:19,0:19:39.52:0,40,371	0/0:19,0:21:24:0,24,184	0/0:25,0:24:21.14:0,21,180	0/0:13,0:13:11.48:0,11,82	0/0:11,0:11:3.13:0,3,83	0/1:4,10:13:30.26:160,0,30	0/1:9,15:24:13.67:238,0,14	0/1:2,2:9:18.19:39,0,18	0/0:22,0:22:20.77:0,21,187	0/0:5,0:17:12.98:0,13,80	0/0:2,0:9:11.40:0,11,58	1/1:7,13:22:17.64:283,18,0	0/1:14,10:24:5.36:229,0,5	0/1:8,15:24:5.22:139,0,5	1/1:1,8:11:24.95:165,25,0
chr10	39858311	.	ATC	A	1166.09	PASS	AB=0.975;AC=14;AF=0.250;AN=56;BaseQRankSum=7.990;DP=396;FS=60.626;HRun=0;HaplotypeScore=69.4257;InbreedingCoeff=0.0129;MQ=74.24;MQ0=0;MQRankSum=0.936;QD=5.45;ReadPosRankSum=7.757;VQSLOD=-0.5324;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:24:93.70:120,0,94	0/0:5,0:5:15.02:0,15,176	0/0:11,0:12:2.66:0,3,141	0/1:10,0:8:1.54:2,0,26	0/0:22,0:22:17.94:0,18,252	0/0:9,0:10:25.62:0,26,189	0/0:8,0:8:8.71:0,9,110	0/1:33,1:34:24.81:25,0,345	0/0:15,1:16:1.84:0,2,229	0/0:12,0:12:29.05:0,29,325	0/0:13,0:13:32.40:0,32,364	0/0:8,0:8:20.92:0,21,316	0/1:14,0:14:55.77:73,0,56	0/1:12,1:13:4.75:127,0,5	0/0:18,0:18:2.41:0,2,226	0/0:18,0:18:51.85:0,52,384	0/0:12,0:12:26.80:0,27,218	0/0:6,0:6:14.90:0,15,154	0/1:18,1:19:77.65:110,0,78	0/1:21,0:21:45.40:192,0,45	1/1:3,0:3:4.72:15,5,0	0/0:6,0:6:11.47:0,11,82	0/0:9,0:9:23.99:0,24,257	0/0:7,0:7:15.02:0,15,211	0/1:19,0:19:77.59:126,0,78	0/1:15,1:16:21.21:142,0,21	1/1:23,2:26:17.37:286,17,0	0/1:15,0:15:8.17:103,0,8
chr10	39859673	.	TA	T	3734.74	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=3.742;DP=534;FS=16.054;HRun=9;HaplotypeScore=60.3912;InbreedingCoeff=0.9549;MQ=74.06;MQ0=0;MQRankSum=-1.352;QD=22.36;ReadPosRankSum=0.276;VQSLOD=2.7927;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:36.09:0,36,405	0/0:17,0:17:48.14:0,48,554	0/0:10,0:10:17.93:0,18,204	0/0:11,0:12:0.99:0,1,88	0/0:25,0:25:60.18:0,60,692	0/0:1,0:16:36.93:0,37,188	0/0:2,0:10:25.72:0,26,141	1/1:5,23:28:69.02:627,69,0	0/0:4,0:20:48.77:0,49,286	0/0:30,0:30:81.21:0,81,915	0/0:19,1:19:14.66:0,15,423	0/0:3,0:15:37.10:0,37,207	0/0:22,0:22:37.64:0,38,657	0/0:19,0:19:45.13:0,45,519	0/0:32,0:32:90.24:0,90,1012	0/0:21,0:21:57.17:0,57,658	0/0:14,0:14:33.06:0,33,366	0/0:16,0:16:48.07:0,48,515	1/1:0,11:11:27:247,27,0	1/1:6,23:29:66.02:604,66,0	1/1:2,7:9:21.01:192,21,0	0/0:22,0:22:57.16:0,57,649	0/0:4,0:22:45.32:0,45,251	0/0:0,0:10:25.57:0,26,130	1/1:2,22:23:57.03:522,57,0	1/1:4,30:34:58.39:775,58,0	1/1:1,25:26:66.03:603,66,0	1/1:0,6:6:18.01:165,18,0
chr10	39860394	.	CTT	C	8274.12	PASS	AB=0.768;AC=16;AF=0.286;AN=56;BaseQRankSum=13.412;DP=683;FS=9.302;HRun=3;HaplotypeScore=87.5645;InbreedingCoeff=0.8253;MQ=74.58;MQ0=0;MQRankSum=-0.850;QD=39.78;ReadPosRankSum=0.584;VQSLOD=3.6497;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:36.12:0,36,684	0/0:13,0:13:39.13:0,39,753	0/1:11,0:11:22.29:22,0,404	0/0:15,0:14:41.35:0,41,750	0/0:43,0:43:99:0,129,2458	0/0:31,0:31:93.28:0,93,1751	0/0:20,0:20:57.20:0,57,1102	1/1:2,27:29:81.26:1218,81,0	0/0:22,0:22:66.21:0,66,1223	0/0:29,0:29:81.28:0,81,1546	0/0:26,0:26:78.27:0,78,1478	0/0:30,0:30:87.30:0,87,1659	0/0:26,0:26:75.26:0,75,1419	0/0:24,0:24:69.24:0,69,1324	0/0:39,0:39:99:0,114,2203	0/0:39,0:39:99:0,111,2057	0/0:21,0:21:63.22:0,63,1216	0/0:10,0:10:30.10:0,30,577	1/1:0,25:25:75.24:1127,75,0	1/1:0,42:42:99:1698,111,0	1/1:0,14:14:42.14:643,42,0	0/0:23,0:23:69.24:0,69,1299	0/0:28,0:28:84.29:0,84,1585	0/0:22,0:22:63.22:0,63,1206	1/1:0,20:20:57.19:873,57,0	0/1:3,19:22:52.76:809,0,53	1/1:1,29:30:84.29:1286,84,0	1/1:0,15:15:39.13:597,39,0
chr10	39861165	.	AT	A	4008.15	PASS	AB=0.769;AC=34;AF=0.607;AN=56;BaseQRankSum=8.069;DP=542;FS=3.210;HRun=13;HaplotypeScore=73.4210;InbreedingCoeff=0.8236;MQ=68.23;MQ0=0;MQRankSum=0.931;QD=11.82;ReadPosRankSum=1.676;VQSLOD=3.7791;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,15:19:41.74:306,42,0	0/0:7,0:7:18.03:0,18,174	0/1:12,0:11:8.37:8,0,51	0/0:5,0:5:2.99:0,3,23	0/0:27,1:29:50.03:0,50,630	1/1:2,0:19:28.51:82,29,0	1/1:4,0:16:22.38:65,22,0	1/1:11,22:33:36.35:430,36,0	1/1:2,0:14:22.39:65,22,0	0/0:17,0:19:41.86:0,42,375	0/0:25,0:29:62.66:0,63,559	1/1:1,0:13:24.44:70,24,0	1/1:3,17:20:44.70:328,45,0	1/1:6,12:19:8.61:217,9,0	0/0:23,0:23:62.93:0,63,609	0/0:22,1:24:28.28:0,28,455	0/0:37,1:40:71.05:0,71,828	0/0:12,0:12:27.04:0,27,263	1/1:10,15:25:21.47:318,21,0	1/1:7,27:34:45.25:496,45,0	0/1:1,6:7:11.27:92,0,11	0/0:14,0:14:28.27:0,28,257	1/1:4,0:15:16.28:47,16,0	1/1:0,0:10:20.37:59,20,0	1/1:3,26:29:77.53:569,78,0	1/1:6,15:22:17.52:283,18,0	1/1:4,17:22:48.91:355,49,0	1/1:0,10:10:29.83:219,30,0
chr10	39861320	.	CATGAGG	C	5903.42	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=7.025;DP=618;FS=0.000;HRun=0;HaplotypeScore=142.0265;InbreedingCoeff=0.9899;MQ=76.69;MQ0=0;MQRankSum=-14.104;QD=55.17;ReadPosRankSum=0.603;VQSLOD=4.5450;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:84.29:0,84,2937	0/0:9,0:9:24.08:0,24,834	0/0:24,0:23:66.22:0,66,1947	0/0:16,0:16:32.52:0,33,1259	0/0:28,0:28:72.25:0,72,2489	1/1:2,20:22:57.20:1366,57,0	1/1:1,11:12:15.05:360,15,0	0/0:34,0:34:99:0,99,3046	1/1:0,21:21:60.21:1439,60,0	0/0:23,0:23:66.23:0,66,2254	0/0:20,0:20:57.20:0,57,2011	1/1:0,25:25:72.25:1729,72,0	0/0:35,0:35:99:0,105,3671	0/0:29,0:29:84.27:0,84,2911	0/0:29,0:29:87.30:0,87,2974	0/0:33,0:33:96.33:0,96,3393	0/0:26,0:26:78.27:0,78,2772	0/0:17,0:17:48.16:0,48,1661	0/0:18,0:18:51.17:0,51,1790	0/0:20,0:20:54.18:0,54,1877	0/0:21,0:21:63.22:0,63,2272	0/0:13,0:13:39.12:0,39,1323	1/1:0,11:11:30.10:721,30,0	1/1:4,12:16:12.04:288,12,0	0/0:22,0:22:57.20:0,57,1958	0/0:23,0:23:69.24:0,69,2344	0/0:30,0:30:90.31:0,90,3203	0/0:12,0:12:33.10:0,33,1158
chr10	39861595	.	CAG	C	5297.19	PASS	AB=0.875;AC=13;AF=0.232;AN=56;BaseQRankSum=12.557;DP=639;FS=1.715;HRun=0;HaplotypeScore=79.2062;InbreedingCoeff=0.8984;MQ=74.17;MQ0=2;MQRankSum=0.858;QD=37.57;ReadPosRankSum=2.983;VQSLOD=7.0011;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:87.24:0,87,1554	0/0:13,0:13:39.13:0,39,752	0/0:25,0:25:68.39:0,68,1252	0/0:21,0:21:50.67:0,51,788	0/0:27,0:27:81.26:0,81,1528	1/1:0,20:20:54.18:825,54,0	1/1:1,14:15:36.12:550,36,0	0/0:34,0:34:99:0,99,1814	1/1:0,21:21:63.21:963,63,0	0/0:27,0:27:81.23:0,81,1438	0/0:19,0:19:57.16:0,57,1031	1/1:1,25:25:60.20:918,60,0	0/0:28,0:28:81.28:0,81,1553	0/0:28,0:28:81.25:0,81,1487	0/0:31,0:31:93.29:0,93,1718	0/0:19,0:19:57.20:0,57,1100	0/0:25,0:25:75.19:0,75,1311	0/1:6,1:7:27.61:28,0,263	0/0:28,0:28:81.25:0,81,1471	0/0:25,0:25:66.23:0,66,1273	0/0:28,0:28:84.23:0,84,1478	0/0:11,0:11:33.07:0,33,519	1/1:0,24:24:65.89:1005,66,0	1/1:1,27:27:66.22:1009,66,0	0/0:20,0:20:57.20:0,57,1092	0/0:19,0:19:57.19:0,57,1070	0/0:34,0:34:99:0,99,1771	0/0:7,0:7:18.06:0,18,347
chr10	39862414	.	ATTG	A	7538.02	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=17.375;DP=773;FS=2.242;HRun=0;HaplotypeScore=136.0629;InbreedingCoeff=0.9941;MQ=69.80;MQ0=0;MQRankSum=-4.861;QD=32.63;ReadPosRankSum=0.486;VQSLOD=5.1613;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:60.14:0,60,1185	0/0:15,0:15:45.12:0,45,868	0/0:22,0:21:57.16:0,57,978	0/0:22,0:21:51.14:0,51,873	0/0:33,0:33:90.28:0,90,1824	0/0:32,0:32:87.26:0,87,1725	0/0:24,0:24:60.19:0,60,1196	1/1:7,25:32:75.10:983,75,0	0/0:33,0:33:90.29:0,90,1846	0/0:26,0:26:66.20:0,66,1207	0/0:29,0:29:81.26:0,81,1680	0/0:33,0:33:90.29:0,90,1842	0/0:40,0:40:99:0,105,2089	0/0:35,0:35:96.26:0,96,1866	0/0:35,0:35:99:0,99,2085	0/0:34,0:34:93.30:0,93,1919	0/0:22,0:22:63.17:0,63,1229	0/0:8,0:8:21.05:0,21,404	1/1:3,14:17:41.98:546,42,0	1/1:4,32:36:93.19:1354,93,0	1/1:3,25:28:51.17:788,51,0	0/0:26,0:26:72.20:0,72,1360	0/0:30,0:30:75.26:0,75,1573	0/0:20,0:20:54.19:0,54,1134	1/1:1,34:35:87.12:1298,87,0	1/1:7,33:40:99:1423,99,0	1/1:7,31:38:63.21:961,63,0	1/1:0,5:5:12.04:186,12,0
chr10	39865338	.	AG	A	6330.47	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=14.425;DP=624;FS=8.969;HRun=3;HaplotypeScore=60.8593;InbreedingCoeff=0.9765;MQ=73.88;MQ0=0;MQRankSum=-0.722;QD=32.46;ReadPosRankSum=2.964;VQSLOD=4.9876;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:69.01:0,69,941	1/1:1,7:8:20.98:240,21,0	0/0:18,0:16:37.88:0,38,469	0/0:16,0:15:35.62:0,36,397	1/1:1,26:27:75.17:907,75,0	0/0:22,0:22:66.21:0,66,932	0/0:18,0:18:51.12:0,51,663	0/0:36,0:36:99:0,105,1438	0/0:20,0:20:57.09:0,57,772	1/1:0,30:30:90.24:1076,90,0	1/1:0,24:24:72.23:891,72,0	0/0:27,0:27:78.21:0,78,1049	0/0:27,0:27:81.26:0,81,1147	0/0:26,0:26:78.25:0,78,1106	1/1:1,29:30:75.10:906,75,0	1/1:1,20:21:7.99:551,8,0	1/1:1,14:15:45.09:536,45,0	1/1:0,23:23:51.16:631,51,0	0/0:22,0:22:63.15:0,63,848	0/0:25,0:25:72.20:0,72,979	0/0:21,0:21:57.19:0,57,820	1/1:0,17:17:48.15:593,48,0	0/0:24,0:24:72.24:0,72,1035	0/0:16,0:15:48.14:0,48,654	0/0:30,0:30:90.28:0,90,1261	0/0:14,1:15:7.97:0,8,551	0/0:33,0:33:99:0,99,1369	0/0:8,0:8:24.05:0,24,307
chr10	39865502	.	CT	C	1218.08	PASS	AB=0.857;AC=17;AF=0.304;AN=56;BaseQRankSum=5.662;DP=501;FS=8.799;HRun=14;HaplotypeScore=65.8326;InbreedingCoeff=0.7971;MQ=69.28;MQ0=1;MQRankSum=1.299;QD=7.52;ReadPosRankSum=0.681;VQSLOD=2.0830;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:20:26.30:0,26,174	0/0:5,0:5:11.84:0,12,93	0/0:14,0:9:11.45:0,11,111	0/0:9,0:8:5.48:0,5,27	0/0:25,0:25:38.84:0,39,327	0/0:18,0:19:50.77:0,51,431	0/0:10,4:14:3.44:0,3,174	1/1:10,22:34:56.98:371,57,0	0/0:17,1:19:21.16:0,21,321	0/0:21,0:22:20.67:0,21,285	0/0:23,2:27:28.96:0,29,369	0/0:17,1:18:15.40:0,15,267	0/0:6,0:24:21.56:0,22,128	0/0:6,0:21:26.55:0,27,135	0/0:21,1:23:24.84:0,25,320	0/1:14,3:18:11.21:11,0,174	0/0:7,0:8:5.84:0,6,42	0/0:14,0:14:25.94:0,26,231	1/1:5,6:11:17.94:105,18,0	1/1:5,16:22:34.44:223,34,0	1/1:1,11:12:17.85:123,18,0	0/0:12,0:13:26.74:0,27,224	0/0:22,0:22:28.90:0,29,362	0/0:20,0:21:51.21:0,51,434	1/1:6,13:22:2.01:134,2,0	1/1:1,10:12:25.73:165,26,0	1/1:7,14:23:9.39:193,9,0	1/1:1,6:8:13.94:88,14,0
chr10	39866841	.	GT	G	4727.18	PASS	AB=1.000;AC=24;AF=0.429;AN=56;BaseQRankSum=11.220;DP=640;FS=5.023;HRun=9;HaplotypeScore=85.9399;InbreedingCoeff=0.7018;MQ=66.09;MQ0=4;MQRankSum=-2.313;QD=14.96;ReadPosRankSum=3.198;VQSLOD=5.1559;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,134,1500	1/1:1,12:13:38.62:339,39,0	0/0:23,1:14:30.03:0,30,322	0/0:17,0:15:17.14:0,17,216	1/1:6,28:34:78.02:714,78,0	0/0:26,0:26:69.18:0,69,775	0/0:13,0:13:39.12:0,39,450	0/0:26,0:24:9.86:0,10,77	0/0:16,0:16:45.13:0,45,519	1/1:6,21:27:57:517,57,0	1/1:3,19:22:54.02:493,54,0	0/0:21,0:21:45.54:0,46,539	0/0:26,0:27:67.25:0,67,750	0/0:23,0:22:33.42:0,33,440	1/1:2,28:30:78.03:714,78,0	1/1:2,17:19:51.02:466,51,0	1/1:5,20:24:51.02:467,51,0	1/1:2,17:19:38.40:379,38,0	0/0:13,0:12:10.56:0,11,47	0/1:32,0:32:16.43:16,0,42	0/0:14,0:13:0.06:0,0,48	1/1:3,19:22:57.03:521,57,0	0/0:22,0:22:48.14:0,48,554	0/0:33,0:33:48.63:0,49,599	1/1:21,0:21:21.77:53,22,0	0/1:16,0:16:5.40:13,0,5	0/1:30,0:30:25.25:32,0,25	0/1:5,0:5:4.15:4,0,13
chr10	39866848	.	TTTG	T	4609.25	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=3.741;DP=652;FS=2.539;HRun=0;HaplotypeScore=107.2974;InbreedingCoeff=0.7889;MQ=63.09;MQ0=6;MQRankSum=-1.367;QD=18.74;ReadPosRankSum=-0.003;VQSLOD=4.8208;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:50:99:0,142,2640	0/0:13,0:13:8.88:0,9,175	0/1:23,0:12:3.97:4,0,294	0/0:19,0:12:24.81:0,25,293	0/0:30,0:30:80.93:0,81,648	0/0:24,0:24:63.12:0,63,1088	0/0:16,0:16:48.11:0,48,823	1/1:7,22:24:63.92:729,64,0	0/0:16,0:16:48.15:0,48,942	0/0:28,0:28:66.49:0,66,544	0/0:21,0:21:53.63:0,54,372	0/0:22,0:22:30.64:0,31,945	0/0:29,0:29:48.24:0,48,1243	0/1:24,0:22:12.88:13,0,699	0/0:31,0:31:79.97:0,80,606	0/0:18,0:18:48.40:0,48,344	0/0:24,0:23:54.95:0,55,422	0/0:19,0:19:44.83:0,45,366	1/1:0,13:12:35.85:380,36,0	1/1:1,32:32:87.16:1172,87,0	1/1:4,12:14:14.97:206,15,0	0/0:23,0:22:52.72:0,53,453	0/0:22,0:22:47.47:0,47,1033	0/1:35,0:35:3.17:3,0,1053	1/1:0,20:20:42.14:661,42,0	1/1:0,15:15:42.02:541,42,0	1/1:2,30:32:28.13:760,28,0	1/1:1,5:6:9.03:142,9,0
chr10	39866849	.	TTG	T	2557.82	PASS	AB=0.834;AC=20;AF=0.357;AN=56;BaseQRankSum=11.423;DP=652;FS=1.138;HRun=0;HaplotypeScore=101.1783;InbreedingCoeff=0.6702;MQ=62.80;MQ0=6;MQRankSum=-2.387;QD=9.30;ReadPosRankSum=-0.008;VQSLOD=3.4390;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:50:99:0,141,2202	0/0:13,0:13:15.74:0,16,121	0/0:22,0:12:26.11:0,26,310	0/0:19,0:11:13.76:0,14,243	0/0:30,0:30:80.52:0,81,413	0/0:23,0:23:63.16:0,63,952	0/0:16,0:16:48.11:0,48,694	1/1:30,0:24:58.97:356,59,0	0/0:16,0:16:48.15:0,48,783	0/0:25,0:25:65.24:0,65,356	0/0:21,0:21:43.38:0,43,239	0/1:19,3:22:64.09:64,0,749	0/1:28,1:29:46.65:47,0,990	0/1:17,7:22:99:234,0,580	0/0:31,0:31:80.40:0,80,403	0/0:18,0:18:44.67:0,45,221	0/0:23,0:23:52.94:0,53,265	0/0:19,0:19:44.14:0,44,232	1/1:13,0:12:31.98:183,32,0	1/1:33,0:32:81.63:532,82,0	1/1:16,0:14:14.88:107,15,0	0/0:24,0:23:53.56:0,54,313	0/0:21,2:23:19.18:0,19,841	0/1:21,14:35:99:253,0,860	1/1:20,0:20:41.83:316,42,0	1/1:15,0:15:39.92:270,40,0	1/1:32,0:32:21.15:336,21,0	1/1:6,0:6:8.96:68,9,0
chr10	39869337	.	CT	C	2881.23	PASS	AB=0.952;AC=19;AF=0.339;AN=56;BaseQRankSum=9.184;DP=453;FS=4.745;HRun=9;HaplotypeScore=50.8525;InbreedingCoeff=0.9344;MQ=71.47;MQ0=1;MQRankSum=2.365;QD=18.24;ReadPosRankSum=2.121;VQSLOD=3.9115;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:63.19:0,63,727	1/1:1,7:8:15.01:137,15,0	0/1:18,1:10:1.44:1,0,125	0/0:20,0:12:9.83:0,10,81	1/1:0,30:30:87.05:796,87,0	0/0:14,0:14:36.11:0,36,415	0/0:9,0:9:21.06:0,21,242	0/0:28,0:28:72.21:0,72,831	0/0:8,0:8:21.05:0,21,234	1/1:4,18:22:54.02:494,54,0	1/1:0,15:15:42.02:384,42,0	0/0:20,0:20:51.13:0,51,570	0/0:18,0:18:45.13:0,45,519	0/0:11,0:11:30.09:0,30,344	1/1:1,11:12:33.02:302,33,0	1/1:2,8:10:18:165,18,0	1/1:3,10:13:19.45:237,19,0	1/1:2,17:19:39.02:357,39,0	0/0:17,0:17:42.04:0,42,467	0/0:23,0:23:60.18:0,60,692	0/0:11,0:11:30.09:0,30,346	1/1:0,9:9:24.01:220,24,0	0/0:16,0:16:42.12:0,42,484	0/0:6,0:6:12.04:0,12,138	0/0:26,0:26:69.20:0,69,795	0/0:16,0:16:47.96:0,48,524	0/0:14,0:14:39.12:0,39,450	0/0:13,0:13:27.08:0,27,312
chr10	39870611	.	GTGTT	G	16185.38	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-9.265;DP=750;FS=13.758;HRun=0;HaplotypeScore=156.2477;InbreedingCoeff=0.9797;MQ=65.53;MQ0=1;MQRankSum=-0.727;QD=30.08;ReadPosRankSum=1.877;VQSLOD=4.2261;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,22:32:60.20:955,60,0	1/1:2,6:8:18.06:293,18,0	0/0:29,0:22:21.05:0,21,348	0/0:22,0:19:32.74:0,33,685	1/1:7,30:37:78.22:1219,78,0	0/0:11,0:32:69.24:0,69,1227	0/0:9,0:21:33.11:0,33,584	1/1:24,21:46:36.11:935,36,0	0/0:6,0:24:54.19:0,54,966	1/1:9,22:32:78.24:1219,78,0	1/1:6,15:23:48.15:739,48,0	0/0:12,0:28:45.15:0,45,797	1/1:9,23:32:51.17:830,51,0	1/1:9,17:26:45.15:732,45,0	1/1:15,30:45:69.24:1123,69,0	1/1:5,28:33:72.25:1172,72,0	1/1:6,16:21:45.15:732,45,0	1/1:2,10:12:21.07:342,21,0	1/1:17,11:28:33.11:513,33,0	1/1:6,22:28:60.17:948,60,0	1/1:13,20:33:48.16:781,48,0	1/1:4,17:21:48.16:781,48,0	0/0:9,0:32:65.09:0,65,1149	0/0:11,0:24:32.14:0,32,529	1/1:3,19:22:51.17:830,51,0	1/1:2,18:20:54.18:870,54,0	1/1:8,25:33:66.23:1074,66,0	1/1:1,3:4:6.02:98,6,0
chr10	39870895	.	C	CT	1606.87	PASS	AB=0.782;AC=12;AF=0.214;AN=56;BaseQRankSum=-8.855;DP=481;FS=1.745;HRun=9;HaplotypeScore=48.6377;InbreedingCoeff=0.6156;MQ=76.24;MQ0=1;MQRankSum=1.427;QD=13.62;ReadPosRankSum=1.896;VQSLOD=3.2566;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:16:32.97:0,33,286	0/0:7,0:7:14.99:0,15,130	0/1:15,0:14:11.05:11,0,112	0/1:24,0:17:1.75:2,0,63	0/0:28,0:28:65.94:0,66,564	1/1:0,23:23:60.16:664,60,0	0/1:2,5:7:11.02:118,0,11	0/0:37,0:37:71.94:0,72,624	0/1:1,5:6:14.01:88,0,14	0/0:31,0:31:80.98:0,81,703	0/0:23,0:23:65.97:0,66,570	1/1:5,11:16:23.90:265,24,0	0/0:10,0:10:29.99:0,30,260	0/0:10,0:10:23.99:0,24,208	0/0:19,0:19:53.97:0,54,465	0/0:14,1:15:11.81:0,12,331	0/0:14,0:13:35.99:0,36,312	0/0:7,0:7:18:0,18,156	0/0:19,0:19:41.96:0,42,359	0/0:25,0:25:71.98:0,72,625	0/0:6,0:6:14.99:0,15,130	0/0:17,0:17:47.97:0,48,413	1/1:2,13:15:36.10:398,36,0	1/1:2,9:11:21.06:232,21,0	0/0:17,0:17:50.99:0,51,443	0/0:18,0:18:44.97:0,45,388	0/0:32,0:34:92.01:0,92,787	0/0:9,0:9:26.99:0,27,234
chr10	39871183	.	G	GA	2857.66	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-12.558;DP=547;FS=7.210;HRun=7;HaplotypeScore=49.2883;InbreedingCoeff=0.9575;MQ=75.13;MQ0=0;MQRankSum=-0.999;QD=28.29;ReadPosRankSum=0.440;VQSLOD=4.1187;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:39.06:0,39,377	0/0:5,0:5:12.02:0,12,116	0/0:12,0:12:4.71:0,5,171	0/0:9,0:9:17.82:0,18,170	0/0:26,0:26:75.11:0,75,719	1/1:2,30:32:81.25:979,81,0	1/1:0,18:18:45.14:544,45,0	0/0:46,0:46:99:0,108,1031	1/1:1,10:11:24.07:290,24,0	0/0:29,0:28:81.04:0,81,763	0/0:28,0:28:84.12:0,84,806	1/1:2,12:14:36.11:435,36,0	0/0:29,0:29:81.11:0,81,771	0/0:17,0:17:48.08:0,48,464	0/0:30,0:30:81.13:0,81,782	0/0:15,1:15:11.84:0,12,398	0/0:16,0:16:39.06:0,39,377	0/0:8,0:8:20.96:0,21,186	0/0:17,0:17:36.05:0,36,347	0/0:30,0:30:84.12:0,84,806	0/0:14,0:14:42.05:0,42,399	0/0:18,0:18:45.05:0,45,429	1/1:3,15:18:42.13:507,42,0	1/1:0,8:8:24.07:290,24,0	0/0:20,0:20:57.08:0,57,545	0/0:24,0:24:66.11:0,66,637	0/0:28,0:28:78.11:0,78,747	0/0:9,0:9:24.04:0,24,232
chr10	39872158	.	C	CA	18738.65	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-11.759;DP=597;FS=1.456;HRun=4;HaplotypeScore=47.4920;InbreedingCoeff=0.9725;MQ=73.31;MQ0=0;MQRankSum=-2.422;QD=36.81;ReadPosRankSum=2.413;VQSLOD=5.0359;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:60.17:0,60,680	1/1:0,13:13:39.13:534,39,0	0/0:9,0:9:21.03:0,21,215	0/0:11,0:11:6.69:0,7,190	1/1:2,39:41:99:1333,99,0	1/1:2,28:30:75.25:1026,75,0	1/1:0,9:9:15.05:205,15,0	1/1:3,18:21:54.13:689,54,0	1/1:0,18:18:51.17:698,51,0	1/1:3,19:22:63.21:856,63,0	1/1:1,24:25:72.24:985,72,0	1/1:0,17:17:48.16:657,48,0	0/0:27,0:27:69.19:0,69,782	0/0:20,0:20:60.14:0,60,659	1/1:0,33:33:90.30:1231,90,0	1/1:0,19:19:51.17:698,51,0	1/1:1,13:14:36.12:493,36,0	1/1:0,9:9:21.07:287,21,0	1/1:0,21:21:63.20:842,63,0	1/1:1,32:33:93.26:1240,93,0	1/1:0,11:11:33.11:451,33,0	1/1:1,22:23:60.20:821,60,0	1/1:0,24:24:69.23:944,69,0	1/1:0,17:17:51.17:698,51,0	1/1:1,17:18:45.15:616,45,0	1/1:0,38:38:99:1557,114,0	1/1:2,28:30:78.26:1067,78,0	1/1:0,23:23:60.20:814,60,0
chr10	39873447	.	A	ACT	10820.49	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-2.160;DP=455;FS=19.588;HRun=0;HaplotypeScore=95.9959;InbreedingCoeff=0.8328;MQ=63.98;MQ0=0;MQRankSum=-3.169;QD=26.92;ReadPosRankSum=3.938;VQSLOD=4.1413;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:8:14.88:0,15,108	1/1:1,10:11:21.07:355,21,0	0/0:10,0:10:10.14:0,10,243	0/0:12,0:12:14.17:0,14,224	1/1:4,26:32:59.12:831,59,0	1/1:37,0:37:99:1305,105,0	1/1:14,0:14:32.52:394,33,0	1/1:18,0:22:47.94:423,48,0	1/1:22,0:22:59.34:667,59,0	1/1:6,9:15:36.02:558,36,0	1/1:3,23:28:57.02:918,57,0	1/1:23,0:23:56.43:612,56,0	0/0:5,0:13:7.64:0,8,54	0/0:10,0:10:0.03:0,0,98	1/1:2,16:22:44.18:728,44,0	1/1:3,9:13:24.01:368,24,0	1/1:1,20:25:54.18:915,54,0	1/1:0,7:7:9.03:159,9,0	1/1:6,0:9:21.01:224,21,0	1/1:12,0:12:26.14:209,26,0	1/1:13,0:14:35.81:295,36,0	1/1:0,14:14:27.09:471,27,0	1/1:20,0:20:50.28:605,50,0	1/1:13,0:13:26.45:251,26,0	1/1:8,0:12:18.40:143,18,0	1/1:3,7:10:17.60:182,18,0	1/1:14,0:25:13.75:177,14,0	1/1:1,0:2:3.01:31,3,0
chr10	39873448	.	C	CT	6124.66	PASS	AB=0.962;AC=44;AF=0.786;AN=56;BaseQRankSum=0.432;DP=455;FS=4.450;HRun=0;HaplotypeScore=104.5304;InbreedingCoeff=0.6636;MQ=62.72;MQ0=0;MQRankSum=-4.291;QD=15.24;ReadPosRankSum=6.782;VQSLOD=6.6587;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:8:14.88:0,15,108	1/1:10,1:11:20.32:136,20,0	0/0:10,0:10:15.92:0,16,214	0/0:11,0:11:14.93:0,15,219	1/1:29,1:30:41.60:409,42,0	1/1:11,28:39:99:945,105,0	1/1:8,8:16:37.31:305,37,0	1/1:24,0:24:24.13:367,24,0	1/1:8,14:22:59.07:474,59,0	1/1:15,1:16:35.72:298,36,0	1/1:24,1:25:55.56:420,56,0	1/1:7,16:23:16.65:362,17,0	0/0:14,0:14:1.19:0,1,38	0/0:10,0:10:17.63:0,18,131	1/1:20,0:20:43.03:265,43,0	1/1:11,1:12:1.43:125,1,0	1/1:25,0:25:29.05:305,29,0	1/1:7,0:7:8.89:60,9,0	1/1:7,0:8:17.64:139,18,0	0/1:11,0:12:1.48:156,0,1	1/1:13,1:14:15.71:214,16,0	1/1:14,0:14:26.61:177,27,0	1/1:5,15:20:40.78:396,41,0	1/1:9,5:14:10.25:160,10,0	1/1:11,1:12:18.01:129,18,0	1/1:11,0:11:17.21:151,17,0	0/1:25,0:25:53.69:115,0,54	1/1:2,0:2:2.66:16,3,0
chr10	39873452	.	C	CCCCA	6197.69	PASS	AB=0.991;AC=21;AF=0.375;AN=56;BaseQRankSum=-2.119;DP=456;FS=4.786;HRun=0;HaplotypeScore=132.2223;InbreedingCoeff=0.3174;MQ=64.90;MQ0=0;MQRankSum=-11.051;QD=24.79;ReadPosRankSum=6.013;VQSLOD=4.1318;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:5:5.95:0,6,44	0/0:10,0:10:15.18:0,15,82	0/0:12,0:12:27.41:0,27,348	0/1:12,0:12:15.71:16,0,199	0/0:29,0:29:27.28:0,27,263	1/1:3,28:36:69.29:1654,69,0	1/1:4,8:17:33.06:598,33,0	0/1:24,0:24:15.57:16,0,191	1/1:4,17:26:57.20:1105,57,0	0/0:18,0:18:37.78:0,38,309	0/0:25,0:25:20.71:0,21,153	1/1:7,16:23:68.43:1230,68,0	0/0:16,0:16:12.37:0,12,92	0/0:9,0:9:6.39:0,6,51	0/0:21,0:21:32.88:0,33,162	0/1:10,0:11:9.91:10,0,64	0/0:27,0:27:21.53:0,22,150	0/0:8,0:8:6.06:0,6,20	0/1:9,0:9:9.76:136,0,10	0/1:8,0:8:2.31:2,0,72	0/0:12,0:12:8.48:0,8,67	0/0:14,0:14:16.80:0,17,66	1/1:2,15:21:32.37:926,32,0	1/1:4,5:13:5.49:378,5,0	0/1:12,0:12:7.18:7,0,37	0/1:10,0:10:3.53:4,0,69	0/1:25,0:25:74.97:75,0,92	0/1:3,0:3:12.52:42,0,13
chr10	39875026	.	G	GAT	4695.63	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-11.147;DP=323;FS=6.068;HRun=0;HaplotypeScore=38.9984;InbreedingCoeff=0.8826;MQ=79.78;MQ0=1;MQRankSum=0.618;QD=38.49;ReadPosRankSum=-2.064;VQSLOD=5.3140;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:45.15:0,45,585	0/0:3,0:3:6.02:0,6,78	0/0:11,0:10:14.10:0,14,146	0/0:11,0:9:3.46:0,3,72	0/0:20,0:20:57.17:0,57,727	0/0:20,0:20:54.15:0,54,673	0/0:5,0:5:12.04:0,12,156	1/1:9,29:40:93.27:1475,93,0	0/0:6,0:6:12.04:0,12,156	0/0:13,0:13:33.11:0,33,429	0/0:5,0:5:12.04:0,12,156	0/0:7,0:7:18.06:0,18,234	0/0:14,0:14:39.11:0,39,490	0/0:8,0:8:21.07:0,21,273	0/0:11,0:11:24.08:0,24,312	0/0:18,0:17:51.17:0,51,663	0/0:9,0:9:24.08:0,24,312	0/0:13,0:13:30.10:0,30,390	1/1:3,5:8:15.05:255,15,0	1/1:0,9:9:27.09:415,27,0	1/1:1,4:5:12.04:204,12,0	0/0:2,0:2:3.01:0,3,38	0/0:7,0:7:18.06:0,18,234	0/0:2,0:2:6.02:0,6,78	1/1:3,11:14:30.10:510,30,0	1/1:3,11:14:33.11:562,33,0	1/1:3,11:14:30.10:510,30,0	1/1:3,15:18:45.15:764,45,0
chr10	39877160	.	TTTTG	T	3135.75	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=10.716;DP=616;FS=0.479;HRun=0;HaplotypeScore=98.5546;InbreedingCoeff=0.9387;MQ=65.02;MQ0=1;MQRankSum=0.147;QD=30.74;ReadPosRankSum=4.152;VQSLOD=3.4270;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:54.13:0,54,1025	0/0:9,0:9:27.08:0,27,619	0/0:29,0:20:45.13:0,45,831	0/0:26,0:16:41.65:0,42,690	0/0:22,0:22:66.23:0,66,1588	1/1:3,15:18:27.09:464,27,0	1/1:3,16:19:1.14:532,1,0	0/0:33,0:33:75.23:0,75,1398	1/1:3,12:15:33.11:567,33,0	0/0:37,0:37:99:0,99,2341	0/0:27,0:27:66.22:0,66,1580	1/1:1,16:17:39.13:670,39,0	0/0:24,0:24:66.21:0,66,1410	0/0:22,0:22:51.17:0,51,1164	0/0:16,0:16:36.12:0,36,794	0/0:21,1:22:8.64:0,9,1256	0/0:40,0:40:97.18:0,97,2245	0/0:13,0:13:28.47:0,28,722	0/0:27,0:27:66.20:0,66,1518	0/0:27,0:27:75.25:0,75,1692	0/0:19,0:19:51.17:0,51,1092	0/0:14,0:14:39.11:0,39,875	1/1:3,16:19:38.91:670,39,0	1/1:2,12:14:23.67:412,24,0	0/0:20,0:20:57.18:0,57,1231	0/0:23,0:23:60.20:0,60,1395	0/0:30,0:30:84.28:0,84,1914	0/0:11,0:11:33.11:0,33,711
chr10	39880827	.	T	TGAGA	10201.86	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-4.095;DP=559;FS=2.304;HRun=0;HaplotypeScore=130.2893;InbreedingCoeff=0.9725;MQ=66.04;MQ0=3;MQRankSum=-4.864;QD=36.31;ReadPosRankSum=0.471;VQSLOD=4.9619;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:72.19:0,72,1187	0/0:5,0:5:15.05:0,15,269	0/0:27,0:21:29.36:0,29,524	0/0:32,0:25:34.41:0,34,542	0/0:25,0:25:54.10:0,54,882	1/1:6,20:27:57.15:1346,57,0	1/1:6,10:17:20.86:453,21,0	1/1:14,12:27:39.05:684,39,0	1/1:6,15:22:45.15:1125,45,0	0/0:16,0:16:36.11:0,36,592	0/0:10,0:10:12.04:0,12,184	1/1:2,13:16:21.07:520,21,0	0/0:19,0:19:30.05:0,30,464	0/0:13,0:13:30.06:0,30,482	0/0:24,0:24:56.96:0,57,859	0/0:16,0:16:45.12:0,45,705	0/0:26,0:26:63:0,63,989	0/0:19,0:19:13.04:0,13,485	1/1:7,17:25:51.03:944,51,0	1/1:9,14:24:32.89:711,33,0	1/1:4,20:25:35.87:839,36,0	0/0:17,0:17:51.04:0,51,838	1/1:11,8:19:23.44:510,23,0	1/1:6,13:18:39.13:979,39,0	1/1:3,11:15:16.61:592,17,0	1/1:7,10:20:33.06:596,33,0	1/1:8,13:21:30.02:751,30,0	1/1:0,2:3:6.02:150,6,0
chr10	39880855	.	AGTGT	A	2341.48	PASS	AB=0.934;AC=30;AF=0.536;AN=56;BaseQRankSum=-3.505;DP=512;FS=10.354;HRun=0;HaplotypeScore=158.7298;InbreedingCoeff=0.3075;MQ=51.62;MQ0=19;MQRankSum=1.346;QD=7.36;ReadPosRankSum=2.685;VQSLOD=2.3846;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:26:77.99:78,0,106	1/1:10,1:11:4.24:151,4,0	0/0:36,0:15:2.86:0,3,18	0/0:41,0:20:5.15:0,5,79	1/1:23,4:28:8.46:315,8,0	0/0:27,0:25:17.87:0,18,263	0/0:13,0:13:16.29:0,16,225	0/1:22,0:19:38.30:58,0,38	0/0:19,0:18:23.80:0,24,286	0/1:15,5:19:22.16:296,0,22	1/1:10,1:11:8.99:76,9,0	0/0:10,0:10:12.03:0,12,132	1/1:5,0:14:11.79:91,12,0	0/1:13,0:13:0.67:1,0,19	1/1:16,0:16:24.02:246,24,0	1/1:15,1:16:14.99:190,15,0	1/1:20,1:21:26.82:444,27,0	0/1:10,3:13:27.48:221,0,27	1/1:14,0:13:2.37:32,2,0	1/1:14,0:15:3.47:29,3,0	1/1:28,0:25:8.71:56,9,0	1/1:18,1:19:16.85:192,17,0	0/0:12,0:11:3.90:0,4,56	0/0:24,0:23:35.65:0,36,560	0/0:9,0:11:1.38:0,1,23	0/1:9,0:9:6.64:20,0,7	0/1:12,0:12:14.29:23,0,14	0/1:8,0:8:3.15:5,0,3
chr10	39880889	.	TGA	T	3004.59	PASS	AB=0.949;AC=33;AF=0.611;AN=54;BaseQRankSum=2.964;DP=468;FS=6.679;HRun=0;HaplotypeScore=127.9493;InbreedingCoeff=0.0968;MQ=44.80;MQ0=31;MQRankSum=2.953;QD=8.08;ReadPosRankSum=2.393;VQSLOD=2.7917;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:22:23.36:274,23,0	1/1:12,0:11:14.97:259,15,0	./.	0/0:13,0:1:3.01:0,3,42	1/1:22,3:25:5.84:203,6,0	0/0:23,0:22:18.03:0,18,277	0/0:21,0:17:32.92:0,33,390	0/1:25,0:17:87.10:87,0,233	0/0:16,0:14:29.88:0,30,391	0/1:10,10:19:31.31:253,0,31	1/1:17,0:16:22.30:280,22,0	0/1:12,0:11:40.71:41,0,55	1/1:12,0:12:14.91:113,15,0	1/1:10,0:10:10.96:92,11,0	1/1:21,0:19:6.38:386,6,0	1/1:9,1:10:7.91:170,8,0	1/1:20,0:19:15.45:433,15,0	0/1:11,2:12:16.81:77,0,17	0/1:14,0:11:27.20:27,0,195	0/0:17,0:16:26.05:0,26,460	0/1:28,0:24:65.65:66,0,186	0/1:9,1:10:0.46:58,0,0	1/1:17,0:15:22.78:91,23,0	0/1:31,0:28:47.28:47,0,109	1/1:15,0:14:22.29:105,22,0	0/1:12,0:11:20.85:21,0,317	0/1:16,0:14:34.22:34,0,194	0/1:7,0:7:60.36:65,0,60
chr10	39880891	.	AGT	A	1485.79	PASS	AB=1.000;AC=25;AF=0.463;AN=54;BaseQRankSum=4.905;DP=472;FS=6.862;HRun=0;HaplotypeScore=131.7831;InbreedingCoeff=0.4262;MQ=45.16;MQ0=30;MQRankSum=0.536;QD=5.59;ReadPosRankSum=2.730;VQSLOD=2.6702;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:23:3.35:0,3,43	1/1:12,0:11:11.28:72,11,0	./.	0/0:13,0:2:6.01:0,6,74	0/1:23,0:23:17.37:26,0,17	0/0:23,0:22:15.05:0,15,228	0/0:20,0:16:18.06:0,18,267	0/0:26,0:17:10.92:0,11,163	0/0:17,0:15:18.04:0,18,254	0/1:20,0:19:48.85:64,0,49	1/1:17,0:16:8.35:90,8,0	1/1:11,1:11:15.04:170,15,0	1/1:11,0:11:0.89:2,1,0	0/0:10,0:10:2.99:0,3,27	1/1:21,0:19:3.25:137,3,0	1/1:11,0:11:10.65:77,11,0	0/1:22,0:21:21.87:134,0,22	0/1:13,0:12:11.13:34,0,11	0/0:14,0:12:15.02:0,15,203	0/0:17,0:16:26.67:0,27,380	0/1:28,0:24:16.33:16,0,216	1/1:10,0:11:1.44:16,1,0	1/1:6,11:16:27.08:304,27,0	1/1:17,14:28:22.67:304,23,0	1/1:13,3:15:5.19:220,5,0	0/0:11,0:11:23.93:0,24,316	0/0:14,0:12:15.05:0,15,215	0/0:8,0:8:9:0,9,112
chr10	39881158	.	GGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	G	2104.07	PASS	AB=0.875;AC=15;AF=0.268;AN=56;BaseQRankSum=6.019;DP=424;FS=7.077;HRun=0;HaplotypeScore=256.1663;InbreedingCoeff=0.6407;MQ=58.84;MQ0=24;MQRankSum=-4.707;QD=21.69;ReadPosRankSum=-0.790;VQSLOD=1.5759;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:52.12:0,52,4368	1/1:2,0:2:3.01:60,3,0	0/0:21,0:12:3.01:0,3,99	0/0:19,0:10:9.03:0,9,249	1/1:11,7:17:11.95:499,12,0	0/0:12,0:13:18.06:0,18,1073	0/0:12,0:12:24.08:0,24,1435	0/0:13,0:12:9.03:0,9,564	0/0:10,0:8:12.04:0,12,837	1/1:16,0:15:2.99:25,3,0	1/1:8,4:12:3.01:230,3,0	0/0:18,0:17:33.11:0,33,3056	0/0:15,0:16:30.10:0,30,3157	0/0:15,0:20:15.52:0,16,1567	1/1:11,2:13:9:460,9,0	1/1:12,6:16:11.96:501,12,0	0/0:10,0:9:8.06:0,8,160	0/1:6,1:6:15.46:263,0,15	0/0:20,0:17:18.05:0,18,1386	0/0:20,0:19:27.06:0,27,2267	0/0:16,0:16:27.09:0,27,1546	1/1:8,2:9:3.01:230,3,0	0/0:5,0:10:6.49:0,6,666	0/0:9,0:12:16.63:0,17,1445	0/0:18,0:17:27.55:0,28,1807	0/0:16,0:15:39.13:0,39,2317	0/0:18,0:15:16.03:0,16,1438	0/0:5,0:3:3.01:0,3,145
chr10	39882797	.	G	GA	7202.90	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-14.558;DP=682;FS=1.020;HRun=4;HaplotypeScore=61.9863;InbreedingCoeff=0.9999;MQ=83.50;MQ0=0;MQRankSum=-0.932;QD=34.46;ReadPosRankSum=-1.643;VQSLOD=4.7507;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,120,1327	0/0:10,0:10:30.09:0,30,340	0/0:26,0:26:69.38:0,69,739	0/0:28,0:27:59.23:0,59,705	0/0:24,0:24:66.16:0,66,727	0/0:37,0:37:99:0,105,1191	0/0:16,0:16:48.14:0,48,544	1/1:3,23:26:69.22:928,69,0	0/0:26,0:26:60.16:0,60,673	0/0:25,0:25:69.19:0,69,776	0/0:25,0:25:72.20:0,72,816	0/0:13,0:13:36.10:0,36,408	0/0:15,0:15:42.12:0,42,476	0/0:27,0:27:69.15:0,69,756	0/0:31,0:31:84.24:0,84,953	0/0:23,0:23:66.17:0,66,739	0/0:31,0:31:93.26:0,93,1053	0/0:17,0:17:45.13:0,45,510	1/1:3,21:24:63.15:807,63,0	1/1:5,25:30:72.20:963,72,0	1/1:0,18:18:45.15:615,45,0	0/0:18,0:18:54.14:0,54,602	0/0:18,0:18:51.13:0,51,569	0/0:20,0:20:54.15:0,54,612	1/1:2,17:19:45.15:616,45,0	1/1:0,30:30:84.28:1146,84,0	1/1:1,42:43:99:1515,111,0	1/1:4,15:19:45.15:612,45,0
chr10	39883333	.	A	ATGTT	35141.87	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-6.134;DP=542;FS=18.160;HRun=0;HaplotypeScore=67.6229;InbreedingCoeff=0.9777;MQ=68.68;MQ0=0;MQRankSum=-6.594;QD=66.94;ReadPosRankSum=3.194;VQSLOD=5.6937;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,23:26:66.18:1672,66,0	1/1:0,7:7:21.07:560,21,0	0/0:13,0:13:33.11:0,33,580	0/0:4,0:4:12.04:0,12,224	1/1:1,24:26:69.20:1700,69,0	1/1:2,12:15:30.10:800,30,0	1/1:2,12:15:36.12:960,36,0	1/1:13,34:49:99:3396,135,0	1/1:1,14:16:42.14:1119,42,0	1/1:6,22:29:78.27:2008,78,0	1/1:5,20:25:69.15:1602,69,0	1/1:2,12:15:36.12:960,36,0	1/1:0,11:13:30.10:800,30,0	1/1:1,15:17:45.15:1198,45,0	1/1:4,24:28:72.20:1860,72,0	1/1:2,17:19:54.19:1438,54,0	1/1:2,13:15:33.11:880,33,0	1/1:1,14:16:36.12:903,36,0	1/1:4,14:17:51.17:1230,51,0	1/1:2,24:26:72.20:1822,72,0	1/1:3,12:15:36.12:932,36,0	1/1:1,17:18:45.15:1198,45,0	1/1:2,17:19:51.18:1357,51,0	1/1:0,8:9:21.07:560,21,0	1/1:1,21:22:54.19:1440,54,0	1/1:0,20:21:63.22:1637,63,0	1/1:6,30:38:96.33:2473,96,0	1/1:0,8:8:24.08:638,24,0
chr10	39885296	.	GA	G	7018.60	PASS	AB=0.519;AC=27;AF=0.482;AN=56;BaseQRankSum=16.407;DP=590;FS=0.336;HRun=5;HaplotypeScore=75.2646;InbreedingCoeff=0.9315;MQ=51.24;MQ0=4;MQRankSum=-10.678;QD=24.12;ReadPosRankSum=-0.949;VQSLOD=3.4430;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,1:26:32.73:0,33,807	0/0:9,0:9:24.08:0,24,328	0/0:16,0:5:12.04:0,12,163	0/0:20,0:9:21.05:0,21,274	0/0:20,0:20:57.19:0,57,778	1/1:1,23:23:42.12:476,42,0	1/1:0,15:14:18.01:204,18,0	1/1:4,9:13:24.03:258,24,0	1/1:1,24:24:60.14:659,60,0	0/0:29,2:31:50.26:0,50,1061	0/0:20,1:21:29.25:0,29,786	1/1:2,16:17:42.12:476,42,0	0/0:22,0:22:63.20:0,63,843	0/0:21,0:21:54.18:0,54,739	0/0:15,0:15:45.11:0,45,594	0/0:23,0:23:69.23:0,69,944	0/0:27,1:27:72.23:0,72,968	0/0:17,1:18:48.15:0,48,640	1/1:4,10:12:30.05:326,30,0	1/1:1,38:39:84.24:951,84,0	1/1:1,11:12:24.07:272,24,0	0/0:29,0:28:84.27:0,84,1127	1/1:0,24:24:54.13:600,54,0	1/1:3,6:9:18.04:195,18,0	1/1:0,26:26:60.17:680,60,0	0/1:2,26:26:6.90:698,0,7	1/1:0,36:33:90.17:1020,90,0	1/1:0,8:8:18.05:204,18,0
chr10	39891360	.	AT	A	2935.18	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=10.438;DP=497;FS=2.205;HRun=11;HaplotypeScore=51.2734;InbreedingCoeff=0.9527;MQ=71.32;MQ0=0;MQRankSum=0.633;QD=17.27;ReadPosRankSum=-1.258;VQSLOD=4.0142;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:24.06:0,24,256	0/0:9,0:9:21.05:0,21,224	0/0:11,0:11:7.33:0,7,217	0/0:6,0:6:14:0,14,111	0/0:29,0:29:75.15:0,75,777	0/0:23,0:23:57.12:0,57,593	0/0:10,0:10:30.08:0,30,320	1/1:5,35:40:99:855,105,0	0/0:15,0:15:45.07:0,45,456	0/0:24,0:24:31.21:0,31,520	0/0:26,0:26:75.16:0,75,780	0/0:11,0:11:21.05:0,21,224	0/0:18,0:18:45.08:0,45,457	0/0:14,0:14:36.08:0,36,378	0/0:19,0:19:51.10:0,51,529	0/0:25,0:26:75.02:0,75,782	0/0:23,0:23:32.60:0,33,487	0/0:18,0:18:39.03:0,39,402	1/1:8,13:21:9.94:287,10,0	1/1:3,22:25:32.98:473,33,0	1/1:3,12:15:29.96:246,30,0	0/0:8,0:8:24.04:0,24,243	0/0:23,0:23:57.14:0,57,608	0/0:3,0:3:6.02:0,6,64	1/1:7,12:19:38.93:320,39,0	1/1:2,18:20:53.86:432,54,0	1/1:2,16:18:14.88:272,15,0	1/1:2,10:12:32.80:255,33,0
chr10	39896017	.	GAAGA	G	4328.64	PASS	AB=0.625;AC=21;AF=0.389;AN=54;BaseQRankSum=5.972;DP=514;FS=0.000;HRun=0;HaplotypeScore=85.3385;InbreedingCoeff=0.8520;MQ=59.75;MQ0=7;MQRankSum=2.641;QD=19.86;ReadPosRankSum=-0.533;VQSLOD=4.1751;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,16:24:27.06:427,27,0	0/0:4,0:4:9.03:0,9,215	./.	0/0:14,0:9:3.01:0,3,40	0/0:30,0:30:24.62:0,25,1529	0/0:8,0:18:15.03:0,15,196	0/0:4,0:12:6.02:0,6,105	1/1:26,11:37:30.08:419,30,0	0/0:7,0:17:12.04:0,12,210	0/0:19,0:19:48.16:0,48,1096	0/0:23,0:23:48.15:0,48,1099	0/0:8,0:20:27.09:0,27,462	1/1:3,9:12:24.08:381,24,0	1/1:5,5:10:12.04:190,12,0	0/0:23,0:23:57.18:0,57,1282	0/0:12,0:12:24.07:0,24,513	0/0:27,0:27:50.91:0,51,1201	0/0:13,0:12:24.08:0,24,560	1/1:13,8:19:19.29:307,19,0	1/1:13,16:29:42.14:657,42,0	1/1:4,4:8:12.04:190,12,0	0/0:15,0:15:21.07:0,21,496	0/0:8,0:20:29.09:0,29,419	0/0:2,0:12:15.05:0,15,262	1/1:7,11:18:24.08:381,24,0	1/1:9,14:23:42.12:625,42,0	1/1:8,17:24:42.14:667,42,0	0/1:2,6:10:21.88:83,0,22
chr10	39897099	.	C	CA	7390.08	PASS	AB=0.610;AC=31;AF=0.554;AN=56;BaseQRankSum=-15.383;DP=625;FS=5.373;HRun=11;HaplotypeScore=81.0360;InbreedingCoeff=0.7606;MQ=68.45;MQ0=8;MQRankSum=-0.210;QD=19.10;ReadPosRankSum=0.814;VQSLOD=5.8500;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,1:39:63.23:0,63,648	0/1:3,8:11:5.20:134,0,5	0/0:27,0:15:30.22:0,30,191	0/0:21,0:10:14.63:0,15,67	1/1:4,12:16:29.98:283,30,0	0/0:14,0:14:31.11:0,31,234	0/0:23,0:23:53.55:0,54,409	1/1:10,17:28:15.91:422,16,0	0/0:18,0:19:43.75:0,44,317	1/1:3,23:29:77.61:727,78,0	1/1:8,22:31:0.57:513,1,0	0/0:12,0:12:29.79:0,30,225	0/0:23,0:24:52.77:0,53,396	0/0:18,1:19:17.36:0,17,318	1/1:2,24:27:69.01:685,69,0	1/1:7,12:21:18.54:340,19,0	1/1:3,32:36:69.87:874,70,0	1/1:4,17:22:42.08:426,42,0	1/1:6,9:15:9.66:265,10,0	0/1:5,14:21:8.18:278,0,8	1/1:2,10:12:21.04:213,21,0	1/1:4,17:22:24.66:407,25,0	0/0:12,1:13:5.27:0,5,221	0/0:24,1:25:45.57:0,46,459	1/1:4,19:24:47.93:471,48,0	1/1:6,27:34:80.97:793,81,0	1/1:7,16:23:24.83:424,25,0	0/1:6,6:12:5.20:134,0,5
chr10	39897729	.	G	GA	5755.06	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-12.333;DP=593;FS=3.446;HRun=8;HaplotypeScore=53.7962;InbreedingCoeff=0.9949;MQ=77.41;MQ0=0;MQRankSum=-1.584;QD=29.97;ReadPosRankSum=2.390;VQSLOD=5.0209;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:45:0,45,407	1/1:1,5:6:12.03:138,12,0	0/0:14,0:14:32.97:0,33,294	0/0:16,0:17:29.76:0,30,274	1/1:1,29:30:84.21:955,84,0	0/0:18,0:18:45.02:0,45,412	0/0:20,0:20:51.03:0,51,466	0/0:25,0:23:54.02:0,54,494	0/0:18,0:18:45.01:0,45,412	1/1:5,18:23:54.16:623,54,0	1/1:1,21:22:54.08:594,54,0	0/0:18,0:18:51.01:0,51,462	0/0:23,0:23:60.03:0,60,549	0/0:22,0:22:60.03:0,60,549	1/1:0,24:24:69.20:795,69,0	1/1:0,26:26:78.23:900,78,0	1/1:0,19:19:51.15:589,51,0	1/1:5,17:22:51.15:584,51,0	0/0:16,0:16:38.99:0,39,353	0/0:32,0:32:75.02:0,75,686	0/0:13,0:13:30.01:0,30,274	1/1:2,18:20:51.14:577,51,0	0/0:29,0:29:78.02:0,78,709	0/0:15,0:15:39.01:0,39,357	0/0:22,0:22:60.03:0,60,549	0/0:36,0:36:99:0,108,989	0/0:26,0:26:72.04:0,72,658	0/0:18,0:18:51.02:0,51,467
chr10	39898143	.	T	TAAG	24061.43	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-11.661;DP=617;FS=0.365;HRun=0;HaplotypeScore=87.4179;InbreedingCoeff=0.9464;MQ=84.33;MQ0=0;MQRankSum=-9.714;QD=50.76;ReadPosRankSum=1.827;VQSLOD=7.0286;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:60.18:0,60,949	1/1:1,8:9:18.06:402,18,0	0/0:22,0:22:60.20:0,60,957	0/0:21,0:21:48.63:0,49,763	1/1:3,27:30:75.17:1623,75,0	1/1:4,26:30:66.23:1473,66,0	1/1:1,21:22:57.20:1272,57,0	1/1:12,7:20:45.61:741,46,0	1/1:0,22:22:60.21:1311,60,0	1/1:2,21:25:72.22:1509,72,0	1/1:3,24:27:69.24:1481,69,0	1/1:3,18:24:54.19:1203,54,0	0/0:41,0:41:99:0,114,1787	0/0:36,0:36:99:0,102,1615	1/1:2,25:28:72.25:1608,72,0	1/1:1,28:31:75.26:1674,75,0	1/1:0,13:13:33.11:736,33,0	1/1:3,8:11:9.69:444,10,0	1/1:7,3:11:23.08:354,23,0	1/1:7,20:27:67.67:1195,68,0	1/1:3,13:16:24.08:446,24,0	1/1:3,23:27:74.95:1457,75,0	1/1:3,19:22:56.90:1224,57,0	1/1:2,18:20:51.17:1110,51,0	1/1:4,18:22:57.19:1169,57,0	1/1:5,10:16:39.12:773,39,0	1/1:6,12:18:39.13:792,39,0	1/1:0,1:3:3.01:67,3,0
chr10	39901789	.	G	GA	3027.55	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-12.838;DP=620;FS=0.397;HRun=9;HaplotypeScore=60.9244;InbreedingCoeff=0.9694;MQ=74.62;MQ0=0;MQRankSum=1.012;QD=23.84;ReadPosRankSum=1.153;VQSLOD=4.4507;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:19.26:0,19,307	0/0:10,0:10:20.96:0,21,179	0/0:14,0:14:29.88:0,30,248	0/0:10,0:10:7.77:0,8,58	0/0:27,0:27:77.73:0,78,662	1/1:0,25:25:69.19:763,69,0	1/1:3,10:13:27.07:299,27,0	0/0:39,0:40:91.98:0,92,785	1/1:4,24:28:72.15:783,72,0	0/0:23,0:23:56.98:0,57,495	0/0:17,0:17:25.14:0,25,344	1/1:1,15:16:10.04:339,10,0	0/0:27,2:29:38.79:0,39,566	0/0:26,0:26:68.96:0,69,595	0/0:27,0:27:59.94:0,60,517	0/0:25,0:25:38.50:0,38,496	0/0:29,0:29:68.88:0,69,584	0/0:17,0:17:47.96:0,48,412	0/0:17,0:17:38.97:0,39,339	0/0:27,0:27:74.98:0,75,648	0/0:21,0:21:59.98:0,60,521	0/0:19,0:19:53.97:0,54,467	1/1:4,18:22:48.13:531,48,0	1/1:5,18:23:45.12:498,45,0	0/0:25,0:25:65.98:0,66,572	0/0:24,0:24:65.98:0,66,573	0/0:43,2:46:58.63:0,59,951	0/0:5,0:5:15:0,15,130
chr10	39902030	.	TCAGA	T	6701.04	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=6.970;DP=664;FS=0.000;HRun=0;HaplotypeScore=127.9202;InbreedingCoeff=0.9577;MQ=70.74;MQ0=0;MQRankSum=-0.898;QD=33.34;ReadPosRankSum=3.875;VQSLOD=4.9726;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:54.14:0,54,1269	0/0:5,0:5:12.04:0,12,305	0/0:24,0:22:53.54:0,54,944	0/0:27,0:27:43.27:0,43,762	0/0:19,0:19:36.11:0,36,820	0/0:23,0:23:45.15:0,45,990	0/0:18,0:18:48.16:0,48,1161	1/1:10,14:24:42.10:655,42,0	0/0:27,0:27:66.21:0,66,1595	0/0:21,0:21:51.16:0,51,1127	0/0:23,0:23:51.17:0,51,1217	0/0:25,0:25:63.22:0,63,1540	0/0:23,0:23:48.16:0,48,1099	0/0:18,0:18:36.12:0,36,905	0/0:31,0:31:66.20:0,66,1563	0/0:26,0:26:66.19:0,66,1514	0/0:30,0:29:69.24:0,69,1664	0/0:6,0:6:15.04:0,15,330	1/1:5,16:21:51.14:769,51,0	1/1:5,15:20:33.11:559,33,0	1/1:5,26:31:51.17:886,51,0	0/0:16,0:16:36.12:0,36,887	0/0:27,0:27:72.23:0,72,1696	0/0:49,0:49:99:0,114,2793	1/1:4,23:27:45.15:768,45,0	1/1:4,26:30:2.01:1135,2,0	1/1:2,34:36:81.24:1408,81,0	1/1:0,12:12:30.10:521,30,0
chr10	39904646	.	T	TC	10782.69	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-4.007;DP=871;FS=1.886;HRun=2;HaplotypeScore=139.1558;InbreedingCoeff=0.9999;MQ=72.19;MQ0=0;MQRankSum=-5.391;QD=38.24;ReadPosRankSum=1.247;VQSLOD=4.4295;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,102,1264	1/1:1,11:12:33.11:475,33,0	0/0:21,0:20:46.70:0,47,531	0/0:18,0:16:37.61:0,38,427	1/1:2,41:43:99:1529,108,0	0/0:29,0:29:84.26:0,84,1041	0/0:26,0:26:78.21:0,78,950	0/0:36,0:36:93.28:0,93,1142	0/0:26,0:26:75.19:0,75,912	1/1:1,39:40:99:1653,120,0	1/1:0,33:33:96.32:1382,96,0	0/0:31,0:31:87.27:0,87,1078	0/0:47,0:47:99:0,138,1709	0/0:34,0:34:90.28:0,90,1108	1/1:3,50:52:99:1900,132,0	1/1:1,32:33:90.30:1296,90,0	1/1:0,23:23:69.23:994,69,0	1/1:3,13:16:36.12:518,36,0	0/0:23,0:23:60.15:0,60,726	0/0:28,0:28:78.25:0,78,967	0/0:49,0:49:99:0,126,1549	1/1:1,28:29:72.16:1036,72,0	0/0:34,0:34:87.25:0,87,1053	0/0:32,0:32:96.30:0,96,1189	0/0:37,0:37:99:0,99,1227	0/0:38,1:39:74.09:0,74,1339	0/0:27,0:27:81.25:0,81,1002	0/0:14,0:14:42.13:0,42,518
chr10	39904989	.	ACGTTATACCTCCATAACCTCCTGTATGCGAGG	A	5733.79	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=7.188;DP=757;FS=0.000;HRun=0;HaplotypeScore=549.7959;InbreedingCoeff=0.9244;MQ=84.77;MQ0=0;MQRankSum=-7.420;QD=37.23;ReadPosRankSum=5.192;VQSLOD=1.1346;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:81.23:0,81,8205	0/0:13,0:13:36.12:0,36,3718	0/0:27,0:27:60.20:0,60,3800	0/0:22,0:22:45.02:0,45,2488	0/0:30,0:30:78.27:0,78,8136	1/1:7,21:28:21.07:1732,21,0	1/1:11,0:11:5.96:44,6,0	0/0:39,0:39:99:0,100,6174	1/1:11,19:30:12.04:990,12,0	0/0:29,0:29:81.28:0,81,8588	0/0:21,0:21:60.20:0,60,6182	1/1:11,16:27:12.04:990,12,0	0/0:37,0:37:96.33:0,96,11050	0/0:25,0:25:57.20:0,57,6639	0/0:36,0:36:84.29:0,84,7832	0/0:43,0:43:96.33:0,96,10192	0/0:24,0:24:63.22:0,63,5987	0/0:8,0:8:24.08:0,24,3083	0/0:23,0:23:51.18:0,51,5107	0/0:30,0:30:81.28:0,81,8517	0/0:41,0:41:99:0,108,11768	0/0:19,0:19:45.15:0,45,4353	1/1:14,23:37:20.79:1732,21,0	1/1:7,14:21:2.96:247,3,0	0/0:28,0:28:78.27:0,78,8027	0/0:32,0:32:84.29:0,84,8232	0/0:39,0:39:99:0,102,10773	0/0:9,0:9:21.07:0,21,2471
chr10	39905521	.	A	ATTT	3924.46	PASS	AB=0.651;AC=41;AF=0.732;AN=56;BaseQRankSum=4.225;DP=540;FS=0.644;HRun=14;HaplotypeScore=97.2732;InbreedingCoeff=0.3492;MQ=72.88;MQ0=0;MQRankSum=-1.713;QD=8.26;ReadPosRankSum=-1.069;VQSLOD=0.2804;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:32.50:0,32,338	0/1:1,0:8:4.09:4,0,22	0/0:8,0:6:7.52:0,8,63	0/1:10,0:11:5.31:5,0,24	0/1:10,0:35:27.13:91,0,27	1/1:6,11:23:27.07:409,27,0	1/1:4,6:13:9.01:127,9,0	1/1:8,1:21:35.55:292,36,0	1/1:3,10:19:12.02:170,12,0	0/1:13,0:29:11.47:34,0,11	0/1:8,0:28:56.97:98,0,57	1/1:5,9:14:16.61:248,17,0	0/0:18,0:20:29.58:0,30,294	0/0:15,0:18:3.47:0,3,210	0/1:7,0:26:34.20:80,0,34	1/1:4,0:19:17.44:37,17,0	1/1:4,0:20:11.71:41,12,0	1/1:4,0:14:6.23:13,6,0	1/1:8,0:22:41.87:358,42,0	1/1:11,0:24:15.64:321,16,0	1/1:4,0:14:9.44:69,9,0	0/1:6,0:14:5.63:6,0,19	1/1:2,6:12:9.01:127,9,0	1/1:2,7:11:12.02:180,12,0	1/1:4,2:29:41.35:354,41,0	1/1:4,1:27:55.09:419,55,0	1/1:13,1:32:42.22:342,42,0	1/1:1,0:8:15.02:98,15,0
chr10	39905739	.	A	AT	4499.75	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=-12.150;DP=472;FS=0.795;HRun=8;HaplotypeScore=42.6324;InbreedingCoeff=0.8877;MQ=68.21;MQ0=0;MQRankSum=-1.150;QD=26.31;ReadPosRankSum=1.128;VQSLOD=5.2703;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:33.02:0,33,302	1/1:1,8:9:24.07:277,24,0	1/1:2,0:2:2.22:7,2,0	0/1:8,0:7:19.35:19,0,21	1/1:5,26:31:78.19:885,78,0	0/0:18,0:19:53.03:0,53,463	0/0:8,0:8:21.01:0,21,192	0/0:47,0:47:99:0,126,1153	0/0:10,0:10:18.01:0,18,165	1/1:2,22:24:69.19:785,69,0	1/1:6,25:31:75.18:851,75,0	0/0:11,0:11:32.86:0,33,288	0/0:32,0:33:92.06:0,92,825	0/0:17,0:17:36.01:0,36,330	1/1:2,13:15:30.09:346,30,0	1/1:2,16:18:39.12:450,39,0	1/1:2,8:10:18.05:208,18,0	1/1:3,9:12:30.09:359,30,0	0/0:14,0:14:36.02:0,36,330	0/0:24,0:24:66.03:0,66,604	0/0:14,0:14:33.02:0,33,302	1/1:2,9:11:27.08:312,27,0	0/0:15,0:15:36:0,36,325	0/0:5,0:5:15.01:0,15,137	0/0:15,0:15:42.02:0,42,384	0/0:30,2:32:23.80:0,24,723	0/0:21,0:21:56.98:0,57,513	0/0:5,0:5:12:0,12,110
chr10	39907729	.	AT	A	2071.59	PASS	AC=48;AF=0.889;AN=54;BaseQRankSum=-4.600;DP=334;FS=29.527;HRun=9;HaplotypeScore=45.1759;InbreedingCoeff=0.4737;MQ=74.22;MQ0=1;MQRankSum=-1.206;QD=7.56;ReadPosRankSum=2.333;VQSLOD=-0.0676;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,0:8:8.85:57,9,0	1/1:3,0:3:5.90:37,6,0	0/0:19,0:15:13.66:0,14,104	0/0:18,0:16:10.86:0,11,71	1/1:4,18:22:1.79:16,2,0	1/1:3,0:16:17.18:90,17,0	1/1:0,0:11:14.20:69,14,0	1/1:15,0:15:20.66:144,21,0	1/1:1,0:6:5.74:30,6,0	1/1:12,0:12:28.98:187,29,0	1/1:5,13:18:2.02:15,2,0	./.	1/1:13,0:13:10.86:66,11,0	1/1:7,0:7:8.73:52,9,0	1/1:19,0:19:35.37:227,35,0	1/1:12,0:12:8.76:125,9,0	1/1:4,0:4:2.98:22,3,0	1/1:6,0:6:11.86:79,12,0	1/1:11,0:11:20.68:136,21,0	1/1:16,0:16:24.04:146,24,0	1/1:6,0:6:5.93:41,6,0	0/0:0,18:18:0:0,0,0	1/1:12,0:14:3.13:12,3,0	1/1:4,0:4:2.68:11,3,0	1/1:16,0:16:28.21:184,28,0	1/1:4,10:14:14.84:106,15,0	1/1:20,0:20:49.31:318,49,0	1/1:1,0:1:2.96:19,3,0
chr10	39908357	.	TTTCCTTCCTTCC	T	8252.35	PASS	AB=0.992;AC=23;AF=0.426;AN=54;BaseQRankSum=-2.285;DP=657;FS=8.282;HRun=0;HaplotypeScore=263.0417;InbreedingCoeff=0.6039;MQ=60.97;MQ0=5;MQRankSum=-4.094;QD=23.65;ReadPosRankSum=-2.822;VQSLOD=1.9543;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:27:66.58:0,67,1441	0/0:9,0:9:21.05:0,21,485	0/0:16,0:13:12.39:0,12,238	./.	0/0:39,0:39:8.06:0,8,1415	0/0:27,0:27:66.09:0,66,1559	0/0:25,0:24:50.79:0,51,428	1/1:15,15:30:42.08:806,42,0	0/0:20,0:20:54.07:0,54,1234	0/1:23,0:23:46.60:47,0,752	0/1:23,0:23:12.85:13,0,817	0/1:22,0:23:4.29:313,0,4	0/0:31,0:31:87.29:0,87,2866	0/0:12,0:12:27.09:0,27,966	0/0:30,0:30:21.92:0,22,1258	0/0:25,0:25:14.82:0,15,1117	0/0:26,0:25:25.69:0,26,854	0/0:13,0:13:26.97:0,27,459	1/1:26,0:26:39.04:749,39,0	1/1:28,0:28:63.13:1014,63,0	1/1:13,0:13:18.02:379,18,0	0/1:39,0:39:42.24:42,0,1232	1/1:24,0:24:9.50:240,10,0	1/1:34,0:34:5.94:103,6,0	1/1:27,6:32:78.24:2078,78,0	0/1:21,0:20:14.72:1007,0,15	1/1:24,0:23:54.15:1154,54,0	1/1:8,0:7:15.04:309,15,0
chr10	39908376	.	CCTTCCTTCCTTCCTTT	C	8679.36	PASS	AB=0.989;AC=25;AF=0.463;AN=54;BaseQRankSum=0.481;DP=624;FS=16.221;HRun=0;HaplotypeScore=308.3080;InbreedingCoeff=0.1982;MQ=50.94;MQ0=7;MQRankSum=-4.351;QD=19.42;ReadPosRankSum=-3.333;VQSLOD=1.8315;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:32:11.40:0,11,1713	0/0:7,0:7:21.05:0,21,479	0/0:8,0:6:11.92:0,12,237	./.	0/1:36,0:36:99:264,0,1359	0/0:24,0:24:69.11:0,69,2153	0/0:29,0:27:71.72:0,72,690	1/1:26,0:26:41.89:805,42,0	0/0:21,0:21:63.09:0,63,1914	0/1:18,0:18:99:158,0,737	0/1:27,0:27:84.17:84,0,815	0/1:20,0:20:4.49:97,0,4	0/0:32,0:32:93.29:0,93,3156	0/0:11,0:11:33.08:0,33,1095	0/1:32,0:32:99:180,0,1217	0/1:30,0:30:99:191,0,1081	0/1:21,0:20:27.65:28,0,946	0/0:11,0:11:29.98:0,30,503	1/1:19,0:17:45.01:821,45,0	0/1:31,0:31:99:728,0,451	1/1:12,0:12:16.97:436,17,0	0/1:39,0:39:99:316,0,1231	1/1:22,0:22:8.35:89,8,0	1/1:30,0:30:8.76:83,9,0	0/1:32,0:32:14.20:1263,0,14	0/1:18,3:21:2.83:1353,0,3	1/1:22,3:24:69.02:1417,69,0	1/1:5,1:5:15.04:365,15,0
chr10	39908380	.	CCTTCCTTCCTTT	C	7073.48	PASS	AB=0.959;AC=29;AF=0.537;AN=54;BaseQRankSum=4.959;DP=618;FS=27.207;HRun=0;HaplotypeScore=277.3534;InbreedingCoeff=0.1654;MQ=49.31;MQ0=7;MQRankSum=-3.854;QD=14.52;ReadPosRankSum=-3.506;VQSLOD=2.2875;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:32,0:31:99:107,0,855	0/0:6,0:6:18.06:0,18,309	0/0:7,0:5:9.03:0,9,154	./.	0/1:36,0:36:99:166,0,876	0/0:24,0:24:42.36:0,42,1291	0/0:30,0:28:15.37:0,15,179	1/1:25,0:25:33.07:465,33,0	0/0:22,0:22:38.72:0,39,1113	0/1:17,0:17:99:144,0,462	0/1:27,0:27:65.84:66,0,499	1/1:2,19:21:11.70:402,12,0	0/0:31,0:31:84.76:0,85,2162	0/1:11,0:11:20.80:21,0,702	0/1:34,0:34:99:159,0,744	0/1:27,0:27:99:137,0,674	0/1:22,0:21:37.60:38,0,561	0/0:10,0:11:9.33:0,9,281	1/1:19,0:17:33.06:472,33,0	0/1:30,0:30:99:539,0,176	1/1:11,0:11:16.31:276,16,0	0/1:40,0:40:99:151,0,772	1/1:0,22:22:14.11:325,14,0	0/1:5,25:30:4.31:115,0,4	1/1:31,0:31:51.03:1488,51,0	1/1:21,0:21:17.05:863,17,0	1/1:25,0:24:62.98:929,63,0	1/1:6,0:5:12.03:210,12,0
chr10	39908388	.	CCTTTCTTTCTTTCTTTCTTTCTTTCTTT	C	2786.61	PASS	AB=0.939;AC=9;AF=0.173;AN=52;BaseQRankSum=5.632;DP=608;FS=4.837;HRun=0;HaplotypeScore=483.1958;InbreedingCoeff=-0.2154;MQ=48.75;MQ0=9;MQRankSum=-8.255;QD=12.61;ReadPosRankSum=-3.633;VQSLOD=0.1278;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:31:70.48:0,70,3917	0/1:7,0:7:52:52,0,130	./.	./.	0/1:37,0:37:99:673,0,657	0/0:18,0:18:39.13:0,39,3710	0/0:29,0:27:44.60:0,45,2316	0/0:33,0:33:48.10:0,48,1292	0/0:21,0:21:51.16:0,51,4307	0/1:18,0:18:99:324,0,409	0/1:16,0:26:99:146,0,321	0/0:20,0:20:12.51:0,13,609	0/0:29,0:29:54.18:0,54,4000	0/0:11,0:11:24.08:0,24,2033	0/1:33,0:33:99:626,0,1365	0/1:27,0:27:99:382,0,814	0/1:23,0:22:99:411,0,686	0/1:10,0:10:99:270,0,130	0/0:18,0:14:24:0,24,916	0/0:30,0:30:63.22:0,63,4499	0/0:11,0:11:17.99:0,18,514	0/1:25,15:40:41.95:42,0,707	0/0:22,0:22:19:0,19,694	0/0:30,0:30:17.89:0,18,498	0/0:32,0:32:75.26:0,75,4554	0/0:21,0:21:51.18:0,51,2278	0/0:22,0:21:39.13:0,39,1802	0/0:5,0:4:9.03:0,9,396
chr10	39908463	.	TTTC	T	5996.02	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=4.684;DP=604;FS=26.770;HRun=0;HaplotypeScore=136.3180;InbreedingCoeff=0.9938;MQ=70.10;MQ0=1;MQRankSum=-1.726;QD=38.19;ReadPosRankSum=1.415;VQSLOD=3.6995;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,108,2056	0/0:6,0:6:18.06:0,18,384	0/0:22,0:22:32.66:0,33,694	0/0:11,0:10:14.03:0,14,243	0/0:37,0:37:99:0,102,1908	0/0:11,0:11:30.08:0,30,577	0/0:14,0:14:33.06:0,33,657	1/1:5,17:22:48.11:705,48,0	0/0:8,0:8:24.08:0,24,512	0/0:33,0:33:96.27:0,96,1862	0/0:20,0:20:30.09:0,30,601	0/0:18,0:18:39.13:0,39,821	0/0:15,0:15:45.11:0,45,812	0/0:9,0:9:27.09:0,27,561	0/0:34,0:34:99:0,99,1902	0/0:33,0:33:96.19:0,96,1881	0/0:35,0:35:99:0,102,1939	0/0:19,0:19:54.09:0,54,1012	1/1:2,15:17:45.08:577,45,0	1/1:0,27:27:69.12:1008,69,0	1/1:0,10:10:30.02:441,30,0	0/0:26,0:26:45.04:0,45,789	0/0:26,0:26:62.80:0,63,1287	0/0:33,0:33:72.25:0,72,1536	1/1:2,21:23:57.19:897,57,0	1/1:0,28:28:78.08:1095,78,0	1/1:0,21:21:60.20:942,60,0	1/1:1,8:9:21.54:331,22,0
chr10	39909913	.	CTCTTTTCTTTTCTT	C	8481.09	PASS	AB=0.595;AC=17;AF=0.304;AN=56;BaseQRankSum=13.506;DP=650;FS=2.551;HRun=0;HaplotypeScore=230.8630;InbreedingCoeff=0.9192;MQ=66.56;MQ0=11;MQRankSum=-7.378;QD=46.86;ReadPosRankSum=-0.164;VQSLOD=4.1532;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:39:93.22:0,93,4730	1/1:1,7:8:8.71:317,9,0	0/0:48,0:25:32.28:0,32,1506	0/0:50,0:24:18.38:0,18,945	1/1:3,18:21:45.02:1327,45,0	0/0:18,0:18:48.16:0,48,2841	0/0:21,0:21:51.17:0,51,2578	0/0:22,0:22:51.12:0,51,2553	0/0:27,0:27:69.21:0,69,3510	1/1:6,19:25:57.13:1607,57,0	1/1:4,19:23:38.88:973,39,0	0/0:22,0:22:54.18:0,54,2766	0/0:14,0:14:36.11:0,36,2206	0/0:20,0:20:51.16:0,51,2778	1/1:2,21:23:39.13:1412,39,0	1/1:5,20:25:30.10:1089,30,0	1/1:4,16:20:17.72:724,18,0	0/1:7,15:22:3.67:350,0,4	0/0:11,0:11:30.10:0,30,1655	0/0:26,0:26:57.18:0,57,3150	0/0:18,0:18:39.13:0,39,2450	1/1:4,10:14:26.91:682,27,0	0/0:19,0:19:42.14:0,42,2310	0/0:20,0:20:51.13:0,51,2795	0/0:33,0:33:78.23:0,78,4421	0/0:28,0:28:78.27:0,78,4862	0/0:30,0:30:66.22:0,66,3659	0/0:3,0:3:9.03:0,9,464
chr10	39910762	.	GCT	G	3549.59	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=6.337;DP=734;FS=0.406;HRun=0;HaplotypeScore=184.3924;InbreedingCoeff=0.9855;MQ=84.02;MQ0=4;MQRankSum=-0.475;QD=25.35;ReadPosRankSum=2.986;VQSLOD=4.4453;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,126,2096	0/0:10,0:10:27.09:0,27,463	0/0:41,0:34:65.48:0,65,846	0/0:71,0:54:28.04:0,28,664	0/0:16,0:16:45.15:0,45,764	1/1:1,15:16:36.07:453,36,0	1/1:2,26:28:60.20:787,60,0	0/0:34,0:33:84.17:0,84,1268	1/1:3,31:34:72.19:925,72,0	0/0:24,0:24:63.19:0,63,1019	0/0:15,0:15:33.11:0,33,565	1/1:3,22:25:39.02:512,39,0	0/0:22,0:22:48.15:0,48,796	0/0:25,0:25:75.26:0,75,1271	0/0:32,0:32:84.29:0,84,1435	0/0:39,0:39:99:0,99,1669	0/0:26,0:26:54.18:0,54,924	0/0:16,0:16:39.13:0,39,667	0/0:24,0:24:56.04:0,56,711	0/0:24,0:24:36.45:0,36,454	0/0:21,0:21:12.02:0,12,178	0/0:9,0:9:27.08:0,27,435	1/1:4,5:9:12.03:144,12,0	1/1:3,25:28:57.14:729,57,0	0/0:17,0:17:21.03:0,21,312	0/0:26,0:26:61.94:0,62,727	0/0:37,0:37:66.86:0,67,723	0/0:8,0:8:24.06:0,24,328
chr10	39910776	.	GCTCTCTTGCT	G	7982.16	PASS	AB=0.735;AC=16;AF=0.286;AN=56;BaseQRankSum=9.002;DP=737;FS=2.049;HRun=0;HaplotypeScore=267.3296;InbreedingCoeff=0.8274;MQ=74.76;MQ0=4;MQRankSum=-10.481;QD=38.38;ReadPosRankSum=-5.725;VQSLOD=3.3658;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,126,5138	0/1:12,1:13:0.75:1,0,1445	0/0:50,0:37:52.90:0,53,1878	0/0:74,0:43:25.89:0,26,1518	0/0:15,0:15:42.14:0,42,1813	0/0:14,0:14:33.07:0,33,1147	0/0:28,0:28:69.02:0,69,2235	1/1:6,32:37:90.24:1706,90,0	0/0:31,0:31:72.20:0,72,2972	0/0:21,0:21:60.21:0,60,2939	0/0:15,0:15:33.11:0,33,1335	0/0:28,0:28:51.10:0,51,1850	0/0:19,0:19:51.17:0,51,2142	0/0:28,0:28:81.28:0,81,3696	0/0:33,0:33:72.25:0,72,3262	0/0:37,0:37:81.28:0,81,3684	0/0:22,0:22:48.16:0,48,2175	0/0:17,0:17:39.13:0,39,1833	1/1:7,21:28:60.19:1132,60,0	1/1:4,20:24:60.18:985,60,0	1/1:3,16:19:8.08:164,8,0	0/0:15,0:15:33.10:0,33,1369	0/0:8,0:8:15.05:0,15,462	0/0:26,0:26:63.09:0,63,2281	1/1:2,15:17:27.08:373,27,0	0/1:4,22:26:84.41:1618,0,84	1/1:9,29:38:78.21:1871,78,0	1/1:2,3:5:6.02:133,6,0
chr10	39910837	.	G	GTCCTTCCT	25893.12	PASS	AB=0.826;AC=45;AF=0.804;AN=56;BaseQRankSum=2.370;DP=717;FS=2.265;HRun=0;HaplotypeScore=231.4316;InbreedingCoeff=0.8493;MQ=51.86;MQ0=1;MQRankSum=-8.608;QD=44.95;ReadPosRankSum=-3.684;VQSLOD=3.8103;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:82.68:0,83,1966	1/1:3,7:10:21:684,21,0	0/0:30,0:25:20.98:0,21,308	0/0:26,0:17:11.08:0,11,278	1/1:2,16:22:44.93:1194,45,0	1/1:10,14:24:54.10:1806,54,0	1/1:21,5:26:66.14:1582,66,0	1/1:46,0:43:45.86:666,46,0	1/1:16,11:27:69.21:1992,69,0	1/1:6,20:27:60.19:2133,60,0	1/1:6,14:24:36.04:1174,36,0	1/1:19,9:28:51.17:1644,51,0	0/0:17,0:17:45.14:0,45,1058	0/0:24,0:24:39.13:0,39,958	1/1:7,10:18:18.06:754,18,0	1/1:6,27:37:44.73:1861,45,0	1/1:8,8:20:8.22:532,8,0	1/1:7,16:25:17.66:533,18,0	1/1:22,0:22:42.05:575,42,0	1/1:32,0:32:69.21:1114,69,0	1/1:10,0:10:14.41:198,14,0	1/1:3,19:25:33.11:1307,33,0	1/1:4,23:29:42.13:1658,42,0	0/1:15,4:19:23.63:346,0,24	1/1:28,0:28:69.08:1080,69,0	1/1:37,0:37:91.39:1607,91,0	1/1:35,0:35:61.53:1298,62,0	1/1:5,0:5:11.51:158,12,0
chr10	39911295	.	T	TTTTAATTTAATTTAA	13721.63	PASS	AB=0.888;AC=40;AF=0.714;AN=56;BaseQRankSum=-5.597;DP=373;FS=0.643;HRun=0;HaplotypeScore=138.9838;InbreedingCoeff=0.4912;MQ=69.81;MQ0=3;MQRankSum=-7.590;QD=42.88;ReadPosRankSum=-4.734;VQSLOD=3.2238;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:30.09:0,30,1102	1/1:5,0:5:3.01:80,3,0	0/1:16,0:8:7.12:7,0,21	0/1:27,0:15:6.76:7,0,34	1/1:16,1:17:21.07:895,21,0	0/1:5,0:27:1.67:2,0,47	1/1:5,0:7:8.91:73,9,0	1/1:41,0:41:78.24:3434,78,0	0/0:6,0:8:1.82:0,2,5	1/1:9,2:11:9.03:525,9,0	1/1:14,0:14:9.03:335,9,0	0/0:4,0:6:1.82:0,2,5	0/0:12,0:12:15.03:0,15,485	0/0:7,0:7:18.06:0,18,643	1/1:6,5:12:3.01:214,3,0	1/1:6,0:8:3.29:150,3,0	1/1:13,6:22:30.10:2003,30,0	1/1:8,0:8:12.04:674,12,0	1/1:27,5:32:36.12:1350,36,0	1/1:10,0:10:9.02:134,9,0	0/1:8,0:8:0:0,0,0	1/1:0,1:1:3.01:214,3,0	0/0:5,0:6:1.82:0,2,5	1/1:1,0:3:0.05:8,0,0	1/1:13,8:21:33.11:1649,33,0	1/1:6,0:6:9.01:175,9,0	1/1:11,0:11:15.05:615,15,0	1/1:9,2:12:18.06:1177,18,0
chr10	39911323	.	T	TAA	1340.05	PASS	AB=0.890;AC=15;AF=0.268;AN=56;BaseQRankSum=10.290;DP=361;FS=18.365;HRun=0;HaplotypeScore=64.3167;InbreedingCoeff=-0.3803;MQ=59.05;MQ0=5;MQRankSum=-4.404;QD=7.28;ReadPosRankSum=1.954;VQSLOD=1.3010;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:54.17:0,54,857	0/1:2,2:4:49.77:50,0,86	0/0:16,0:9:21.04:0,21,284	0/0:26,0:15:19.26:0,19,247	0/0:20,0:20:2.59:0,3,775	0/1:27,0:27:99:284,0,143	0/1:4,0:4:23.21:23,0,86	0/1:25,12:37:99:579,0,1082	0/1:10,0:10:11.63:12,0,221	0/1:9,0:9:11.14:11,0,269	0/1:5,2:7:99:102,0,131	0/0:9,0:9:7.53:0,8,299	0/0:12,0:12:36.11:0,36,556	0/0:10,0:10:30.10:0,30,485	0/1:6,0:6:5.54:6,0,134	0/1:8,2:10:99:113,0,175	0/1:24,0:24:88.74:89,0,699	0/1:4,3:7:43.79:44,0,180	0/0:14,0:14:21.47:0,21,543	0/0:18,0:18:50.73:0,51,748	0/0:2,1:3:1.25:0,1,4	0/0:7,0:7:3.47:0,3,253	0/0:9,0:9:7.10:0,7,319	0/1:3,0:3:16.01:28,0,16	0/1:17,0:17:4.69:5,0,587	0/1:4,1:6:63.75:64,0,155	0/1:11,2:13:78.42:78,0,467	0/0:14,0:14:3.82:0,4,502
chr10	39911660	.	A	AT	8047.07	PASS	AB=0.710;AC=44;AF=0.786;AN=56;BaseQRankSum=-4.725;DP=634;FS=0.479;HRun=12;HaplotypeScore=79.2040;InbreedingCoeff=0.2006;MQ=71.20;MQ0=4;MQRankSum=-0.484;QD=13.76;ReadPosRankSum=0.289;VQSLOD=5.1542;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,26:32:44.20:591,44,0	0/1:3,8:12:1.75:169,0,2	0/1:30,0:20:6.01:6,0,105	0/1:32,0:18:17.08:17,0,43	1/1:9,28:38:47.79:727,48,0	1/1:2,17:20:44.91:423,45,0	1/1:4,9:13:24.04:232,24,0	1/1:11,3:29:49.52:275,50,0	0/1:11,8:20:1.65:241,0,2	0/1:6,12:18:4.71:265,0,5	1/1:9,9:19:51.50:429,52,0	1/1:2,14:16:36.01:341,36,0	0/0:25,0:27:63.64:0,64,448	0/0:19,1:22:6.40:0,6,231	0/1:5,19:24:8.49:410,0,8	1/1:2,31:33:69.11:671,69,0	1/1:15,24:39:33.29:773,33,0	0/1:7,11:18:26.59:253,0,27	1/1:11,1:16:14.06:147,14,0	1/1:3,3:28:55.98:323,56,0	1/1:2,1:13:22.73:114,23,0	1/1:1,10:13:20.03:213,20,0	1/1:6,18:25:7.61:379,8,0	0/1:4,7:11:22.82:99,0,23	1/1:12,1:35:81.64:457,82,0	1/1:6,0:21:44.79:245,45,0	1/1:2,1:22:39.93:214,40,0	1/1:2,1:7:5.80:34,6,0
chr10	39913097	.	AT	A	3481.33	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=7.598;DP=558;FS=3.616;HRun=4;HaplotypeScore=102.0787;InbreedingCoeff=0.9407;MQ=80.78;MQ0=0;MQRankSum=-1.487;QD=29.01;ReadPosRankSum=2.285;VQSLOD=3.3149;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:72.24:0,72,1007	0/0:9,0:9:27.09:0,27,377	0/0:21,0:21:53.31:0,53,660	0/1:12,0:12:0.79:1,0,387	0/0:32,0:32:87.25:0,87,1180	1/1:3,23:25:72.20:848,72,0	1/1:0,14:14:36.11:432,36,0	0/0:31,0:31:87.28:0,87,1200	1/1:3,17:20:54.16:644,54,0	0/0:18,0:18:51.17:0,51,709	0/0:23,0:23:69.23:0,69,960	1/1:1,15:16:45.13:529,45,0	0/0:24,0:24:66.22:0,66,921	0/0:15,0:15:42.14:0,42,588	0/0:22,0:22:63.20:0,63,865	0/0:18,0:18:54.18:0,54,756	0/0:29,0:29:81.26:0,81,1115	0/0:14,0:14:33.11:0,33,457	0/0:21,0:21:63.20:0,63,861	0/0:25,0:25:69.23:0,69,964	0/0:14,0:14:39.13:0,39,546	0/0:13,0:13:39.13:0,39,545	1/1:1,15:16:42.13:503,42,0	1/1:2,14:16:45.10:524,45,0	0/0:16,0:16:42.14:0,42,588	0/0:16,0:16:45.15:0,45,630	0/0:46,0:46:99:0,123,1655	0/0:5,0:5:15.05:0,15,210
chr10	39914279	.	T	TA	8000.19	PASS	AB=1.000;AC=47;AF=0.839;AN=56;BaseQRankSum=-2.210;DP=530;FS=7.344;HRun=10;HaplotypeScore=67.4275;InbreedingCoeff=0.8131;MQ=75.79;MQ0=0;MQRankSum=-0.529;QD=16.81;ReadPosRankSum=0.508;VQSLOD=5.0338;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:16:32.93:0,33,271	1/1:1,1:11:22.85:119,23,0	0/1:21,0:20:21.15:21,0,86	0/0:13,0:10:4.58:0,5,31	1/1:7,0:31:50.37:261,50,0	1/1:6,17:24:32.37:534,32,0	1/1:1,14:15:33.08:352,33,0	1/1:4,20:24:60:614,60,0	1/1:3,16:19:42.11:448,42,0	1/1:5,0:25:48.84:250,49,0	1/1:4,1:25:37:191,37,0	1/1:7,15:22:20.47:423,20,0	0/0:16,0:16:38.95:0,39,320	0/0:8,0:8:17.95:0,18,145	1/1:3,0:19:34.09:171,34,0	1/1:2,2:23:33.32:198,33,0	1/1:0,0:16:25.57:128,26,0	1/1:2,0:7:12.36:56,12,0	1/1:4,15:19:23.44:440,23,0	1/1:4,27:31:65.97:675,66,0	1/1:1,8:9:21.05:224,21,0	1/1:2,2:19:42.80:237,43,0	1/1:5,19:24:20.94:424,21,0	1/1:2,7:9:15:159,15,0	1/1:3,17:20:45.11:480,45,0	1/1:2,19:22:59.35:598,59,0	1/1:4,23:26:47.53:709,48,0	1/1:2,12:14:27.07:288,27,0
chr10	39917583	.	GC	G	5297.23	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=7.733;DP=462;FS=1.224;HRun=2;HaplotypeScore=85.5198;InbreedingCoeff=0.9435;MQ=59.70;MQ0=1;MQRankSum=0.376;QD=32.70;ReadPosRankSum=1.753;VQSLOD=4.8045;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:72.23:0,72,1058	1/1:0,7:7:18.06:234,18,0	0/0:6,0:1:3.01:0,3,43	0/0:9,0:3:3.01:0,3,42	1/1:0,32:32:90.25:1149,90,0	0/0:19,0:19:57.19:0,57,850	0/0:12,0:12:36.12:0,36,539	0/0:15,0:15:42.14:0,42,630	0/0:7,0:7:21.07:0,21,315	1/1:1,22:23:66.20:841,66,0	1/1:0,20:20:45.15:584,45,0	0/0:16,0:16:48.16:0,48,716	0/0:14,0:14:42.14:0,42,622	0/0:18,0:18:54.18:0,54,802	1/1:0,13:13:30.10:387,30,0	1/1:0,10:10:27.09:350,27,0	1/1:0,31:31:72.23:934,72,0	1/1:0,14:14:36.12:467,36,0	0/0:18,0:18:45.14:0,45,657	0/0:17,0:17:48.14:0,48,678	0/0:25,0:25:75.25:0,75,1124	1/1:0,12:12:27.09:351,27,0	0/0:13,0:13:33.10:0,33,474	0/0:16,0:16:48.16:0,48,719	0/0:21,0:21:60.20:0,60,897	0/0:20,1:21:24.25:0,24,838	0/0:15,0:15:45.14:0,45,654	0/0:9,0:8:24.08:0,24,359
chr10	39919512	.	GACACACACACACACACACACACACAC	G	5108.82	PASS	AB=0.692;AC=13;AF=0.232;AN=56;BaseQRankSum=6.170;DP=509;FS=4.025;HRun=0;HaplotypeScore=294.5815;InbreedingCoeff=0.6808;MQ=62.38;MQ0=13;MQRankSum=-3.238;QD=29.88;ReadPosRankSum=-0.878;VQSLOD=2.9520;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:21.07:0,21,1411	0/0:5,0:5:9.01:0,9,585	0/0:27,0:15:8.98:0,9,139	0/0:26,0:16:21.05:0,21,391	0/0:15,0:15:13.10:0,13,592	0/0:19,0:19:26.22:0,26,2459	0/0:21,0:24:24.55:0,25,1370	0/1:35,10:44:1.36:315,0,1	0/0:12,0:12:15.19:0,15,841	0/0:15,0:15:21.06:0,21,1217	0/0:16,0:14:17.33:0,17,1641	0/0:10,0:18:27.04:0,27,667	0/0:7,0:11:18.06:0,18,901	0/0:13,0:16:27.08:0,27,1223	0/0:12,0:13:21.07:0,21,1228	0/0:14,0:14:18.04:0,18,853	0/0:19,0:19:23.63:0,24,1233	0/0:13,0:13:27.07:0,27,1742	1/1:12,5:16:12.67:581,13,0	1/1:9,14:23:23.71:1081,24,0	1/1:23,0:20:20.79:196,21,0	0/0:6,0:7:10.28:0,10,338	0/0:10,0:13:6.44:0,6,118	0/0:20,0:25:21.04:0,21,546	1/1:6,0:21:14.64:905,15,0	0/1:6,0:11:99:419,0,649	1/1:6,18:26:26.99:1416,27,0	0/1:1,3:4:99:196,0,116
chr10	39921139	.	GTGGGGTTGGGGATT	G	795.31	PASS	AB=1.000;AC=25;AF=0.833;AN=30;BaseQRankSum=-2.298;DP=195;FS=0.000;HRun=0;HaplotypeScore=81.2359;InbreedingCoeff=0.2246;MQ=67.77;MQ0=5;MQRankSum=-3.967;QD=6.98;ReadPosRankSum=-3.440;VQSLOD=-0.0058;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,0:4:2.99:23,3,0	./.	0/0:9,0:5:15.02:0,15,563	0/1:11,0:10:19.38:19,0,731	0/0:12,0:12:0.47:0,0,1	1/1:7,0:7:2.99:24,3,0	1/1:6,0:6:3:25,3,0	1/1:12,0:10:8.94:69,9,0	./.	1/1:6,7:13:14.95:211,15,0	./.	./.	1/1:6,0:6:6:92,6,0	./.	./.	./.	./.	./.	1/1:4,0:4:8.99:91,9,0	1/1:15,0:15:6:73,6,0	./.	1/1:9,0:9:6.01:78,6,0	1/1:10,0:10:3.01:59,3,0	./.	./.	1/1:7,4:11:6.02:106,6,0	1/1:5,0:5:3:25,3,0	./.
chr10	39921140	.	T	TA	489.09	PASS	AC=24;AF=0.857;AN=28;BaseQRankSum=-2.279;DP=71;FS=0.000;HRun=0;HaplotypeScore=18.6634;InbreedingCoeff=0.4311;MQ=104.30;MQ0=6;MQRankSum=-3.888;QD=13.97;ReadPosRankSum=-3.352;VQSLOD=2.7137;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,0:1:2.99:23,3,0	./.	0/0:9,0:5:8.08:0,8,116	0/0:11,0:10:20.56:0,21,185	./.	1/1:2,0:2:2.99:24,3,0	1/1:1,0:1:3:25,3,0	1/1:5,0:3:8.94:69,9,0	./.	1/1:7,0:7:14.89:117,15,0	./.	./.	1/1:2,0:2:5.98:46,6,0	./.	./.	./.	./.	./.	1/1:3,0:3:8.95:71,9,0	1/1:2,0:2:5.99:49,6,0	./.	1/1:3,0:3:6:52,6,0	1/1:0,3:3:3.01:33,3,0	./.	./.	1/1:4,0:4:6.01:61,6,0	1/1:2,0:2:3:25,3,0	./.
chr10	39921275	.	A	ATCTC	2289.35	PASS	AB=1.000;AC=31;AF=0.554;AN=56;BaseQRankSum=8.984;DP=525;FS=30.703;HRun=0;HaplotypeScore=232.1185;InbreedingCoeff=0.3986;MQ=65.06;MQ0=0;MQRankSum=-6.304;QD=6.67;ReadPosRankSum=-1.178;VQSLOD=1.2885;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:24.08:0,24,455	1/1:14,0:14:9.34:89,9,0	0/0:30,0:23:53.62:0,54,922	0/0:40,0:35:66.55:0,67,1210	1/1:31,0:31:2.71:47,3,0	1/1:8,6:14:28.79:534,29,0	1/1:5,0:5:6.02:71,6,0	0/1:45,0:41:99:194,0,1006	1/1:5,3:8:24.06:415,24,0	0/1:16,0:16:6.28:305,0,6	1/1:17,0:17:6.77:20,7,0	1/1:8,0:7:10.99:86,11,0	0/0:23,0:23:63.19:0,63,1204	0/0:24,0:24:57.19:0,57,1114	1/1:13,0:13:3.71:19,4,0	1/1:13,0:13:20.93:269,21,0	1/1:8,0:8:1.72:4,2,0	0/0:2,0:2:3.84:0,4,13	0/1:14,0:14:1.99:2,0,473	0/0:40,0:40:20.12:0,20,425	0/0:3,0:3:2.88:0,3,34	1/1:19,0:18:3.10:17,3,0	1/1:27,0:27:8.83:29,9,0	0/1:3,0:3:0:0,0,0	0/1:35,0:35:12.23:12,0,366	0/1:29,0:28:99:199,0,488	0/1:23,0:23:99:157,0,129	0/0:6,0:6:9.87:0,10,108
chr10	39921279	.	A	ATCTC	3067.04	PASS	AB=1.000;AC=33;AF=0.589;AN=56;BaseQRankSum=5.798;DP=568;FS=58.801;HRun=0;HaplotypeScore=194.2899;InbreedingCoeff=0.3433;MQ=62.76;MQ0=0;MQRankSum=-7.126;QD=8.01;ReadPosRankSum=0.447;VQSLOD=0.7277;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:24.08:0,24,343	1/1:14,0:14:9.44:131,9,0	0/0:30,0:23:15.49:0,15,589	0/0:40,0:35:18.08:0,18,835	1/1:33,0:33:2.73:48,3,0	1/1:16,0:16:27.02:497,27,0	1/1:6,0:6:3.78:39,4,0	0/1:46,0:42:99:299,0,849	1/1:10,0:9:24.05:413,24,0	1/1:20,0:18:38.79:344,39,0	1/1:18,0:18:12.03:117,12,0	1/1:6,3:8:16.11:211,16,0	0/0:24,0:24:65.84:0,66,865	0/0:26,0:26:60.13:0,60,769	1/1:18,0:18:6.49:90,6,0	1/1:13,0:13:15.41:183,15,0	1/1:8,0:8:9.03:110,9,0	0/1:2,0:2:7.71:15,0,8	0/1:19,0:17:83.99:84,0,337	0/0:43,0:43:28.01:0,28,330	0/0:3,0:3:5.12:0,5,43	1/1:21,0:20:3.68:54,4,0	1/1:20,8:28:29.92:331,30,0	0/0:3,0:3:0:0,0,0	0/1:39,0:39:24.34:24,0,177	0/1:31,0:30:99:110,0,334	0/1:26,0:26:52.36:102,0,52	0/1:6,0:6:33.08:53,0,33
chr10	39921289	.	CCA	C	1038.62	PASS	AB=0.998;AC=12;AF=0.214;AN=56;BaseQRankSum=-4.474;DP=753;FS=12.100;HRun=0;HaplotypeScore=245.6962;InbreedingCoeff=-0.0903;MQ=52.79;MQ0=1;MQRankSum=5.378;QD=2.87;ReadPosRankSum=-1.660;VQSLOD=0.7145;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:19,0:19:57.83:58,0,130	0/0:19,0:18:32.77:0,33,309	0/0:31,0:21:39.50:0,39,705	0/0:44,0:39:87.54:0,88,1274	0/0:43,0:43:6.49:0,6,108	0/0:19,0:19:39.57:0,40,277	0/0:7,1:8:6.42:0,6,21	0/1:57,0:50:99:147,0,1056	0/0:13,0:12:16.33:0,16,161	0/0:39,1:38:16.99:0,17,1202	0/0:35,0:34:17.85:0,18,141	0/0:17,0:16:31.09:0,31,236	0/1:27,0:27:99:180,0,256	0/1:29,0:29:99:136,0,421	0/0:21,0:21:25.26:0,25,280	0/0:18,0:18:38.80:0,39,398	0/0:9,1:10:10.51:0,11,46	0/0:3,0:3:3.84:0,4,39	0/1:23,0:21:13.25:13,0,442	0/1:58,1:59:99:137,0,407	1/1:11,0:11:21.55:225,22,0	0/0:31,0:30:22.65:0,23,264	0/0:35,0:35:44.61:0,45,265	0/0:4,0:4:2.04:0,2,6	0/1:52,0:52:67.49:67,0,853	0/1:46,0:45:99:132,0,1085	0/1:32,0:32:48.97:49,0,385	0/1:7,0:7:46.91:47,0,106
chr10	39921305	.	C	CCATT	1208.68	PASS	AB=0.922;AC=11;AF=0.196;AN=56;BaseQRankSum=7.999;DP=901;FS=40.563;HRun=0;HaplotypeScore=343.2075;InbreedingCoeff=-0.2306;MQ=37.55;MQ0=8;MQRankSum=-6.503;QD=3.91;ReadPosRankSum=2.348;VQSLOD=1.0296;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:24:12.61:0,13,286	0/1:23,0:22:14.85:15,0,113	0/0:25,0:14:26.38:0,26,293	0/0:31,0:25:58.47:0,58,683	0/1:51,0:50:7.09:7,0,51	0/1:16,9:25:37.78:379,0,38	0/0:11,1:12:4.01:0,4,12	0/0:70,0:60:99:0,105,1199	0/1:10,5:14:26.29:205,0,26	0/0:54,0:48:99:0,117,1110	0/0:44,0:42:20.46:0,20,148	0/1:16,4:19:51.82:124,0,52	0/0:33,0:33:83.86:0,84,919	0/0:30,0:30:65.58:0,66,656	0/0:29,0:28:18.88:0,19,237	0/1:20,0:20:5.02:5,0,196	0/0:7,0:7:2.74:0,3,12	0/0:3,0:3:6.34:0,6,37	0/0:23,0:16:40.65:0,41,279	0/0:78,0:78:61.50:0,62,593	0/0:18,0:17:34.26:0,34,350	0/0:39,0:37:28.46:0,28,224	0/1:38,10:48:99:143,0,153	0/1:7,0:7:11.66:13,0,12	0/0:71,0:71:42.03:0,42,850	0/1:54,0:53:99:218,0,897	0/1:39,0:39:99:161,0,333	0/1:7,0:7:80.46:80,0,122
chr10	39921321	.	C	CCA	48.94	PASS	AB=0.945;AC=6;AF=0.107;AN=56;BaseQRankSum=6.508;DP=834;FS=18.967;HRun=0;HaplotypeScore=324.0289;InbreedingCoeff=-0.1551;MQ=37.19;MQ0=12;MQRankSum=-5.958;QD=0.46;ReadPosRankSum=-5.245;VQSLOD=0.4207;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:24:15.51:0,16,281	0/0:20,0:19:16.24:0,16,353	0/0:14,0:11:26.41:0,26,415	0/0:25,0:20:42.11:0,42,636	0/0:48,0:47:6.02:0,6,98	0/1:23,0:23:26.87:27,0,338	0/1:11,0:11:22.40:22,0,41	0/0:57,0:44:99:0,115,1535	0/1:13,0:13:3.38:3,0,183	0/0:54,0:48:99:0,135,1995	0/0:46,0:43:6.36:0,6,144	0/1:19,0:18:18:18,0,305	0/0:36,0:36:73.06:0,73,1202	0/0:26,0:26:36.12:0,36,627	0/0:32,0:31:7.53:0,8,379	0/0:16,0:16:2.08:0,2,374	0/0:6,0:6:2.92:0,3,20	0/0:3,0:3:5.93:0,6,55	0/0:18,0:12:29.97:0,30,365	0/0:60,12:73:54.31:0,54,1011	0/0:20,0:19:39.13:0,39,636	0/0:33,0:31:14.21:0,14,243	0/0:45,0:45:19.29:0,19,301	0/0:6,0:6:3.01:0,3,49	0/0:68,7:75:64.07:0,64,1243	0/0:46,2:47:14.90:0,15,1403	0/1:31,3:35:46.83:47,0,572	0/1:4,2:6:48.06:48,0,155
chr10	39921345	.	CTA	C	84.96	PASS	AB=0.939;AC=5;AF=0.089;AN=56;BaseQRankSum=4.325;DP=788;FS=3.688;HRun=0;HaplotypeScore=319.3623;InbreedingCoeff=0.1203;MQ=38.03;MQ0=12;MQRankSum=-3.512;QD=1.39;ReadPosRankSum=-1.150;VQSLOD=1.7364;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:32:17.92:0,18,309	0/1:22,0:21:11.32:11,0,132	0/0:4,0:3:9.03:0,9,129	0/0:7,0:5:10.59:0,11,133	0/0:41,0:40:5.83:0,6,85	0/1:18,2:20:27.20:84,0,27	1/1:8,1:8:3.01:38,3,0	0/0:50,0:33:83.56:0,84,1035	0/1:9,1:10:15.23:60,0,15	0/0:54,0:49:87.37:0,87,1281	0/0:44,0:42:8.03:0,8,95	0/0:16,0:15:17.37:0,17,96	0/0:32,0:32:78.25:0,78,1380	0/0:24,0:24:57.01:0,57,990	0/0:35,0:34:14.81:0,15,382	0/0:20,0:20:14.27:0,14,222	0/0:7,0:7:2.97:0,3,20	0/0:2,0:2:6.02:0,6,88	0/0:14,0:11:27.09:0,27,432	0/0:72,0:72:79.63:0,80,1218	0/0:25,0:24:49.86:0,50,814	0/0:30,0:29:8.60:0,9,141	0/0:33,0:33:8.52:0,9,103	0/0:5,0:5:2.67:0,3,20	0/0:82,1:83:90.28:0,90,1379	0/0:49,0:48:99:0,120,1921	0/0:35,0:34:59.32:0,59,799	0/0:11,0:11:25.87:0,26,356
chr10	39921361	.	CTATCTATCTATCT	C	1209.73	PASS	AB=0.924;AC=20;AF=0.357;AN=56;BaseQRankSum=8.669;DP=684;FS=28.433;HRun=0;HaplotypeScore=337.4554;InbreedingCoeff=0.1052;MQ=37.83;MQ0=18;MQRankSum=-5.739;QD=4.29;ReadPosRankSum=-2.459;VQSLOD=0.7061;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:36:13.33:0,13,452	0/1:11,4:14:99:254,0,164	0/0:3,0:1:3.01:0,3,44	0/0:7,0:3:9.03:0,9,140	1/1:36,4:39:4.26:49,4,0	0/1:16,0:16:61.14:107,0,61	1/1:6,0:5:3.01:37,3,0	0/0:39,0:23:62.29:0,62,762	0/1:9,0:9:6.59:7,0,10	0/1:42,4:42:99:320,0,1579	0/1:36,3:37:10.55:80,0,11	0/1:11,0:10:35.86:45,0,36	0/0:37,0:37:90.02:0,90,3717	0/0:22,0:22:57.10:0,57,2122	0/1:21,7:28:22.44:155,0,22	1/1:12,3:15:18.79:158,19,0	0/1:4,1:5:13.96:14,0,20	1/1:1,0:1:3.01:40,3,0	0/0:16,0:12:30.10:0,30,734	0/0:58,0:58:49.34:0,49,2104	0/0:29,0:28:40.53:0,41,1766	1/1:21,0:21:3.45:43,3,0	0/1:24,0:24:62.14:62,0,119	0/1:4,0:4:8.77:9,0,20	0/0:70,0:70:99:0,103,2922	0/0:42,0:41:99:0,117,3697	0/0:31,0:31:42.75:0,43,1157	0/0:10,0:10:24.07:0,24,793
chr10	39921378	.	T	TATCTATCC	4207.66	PASS	AB=0.932;AC=32;AF=0.571;AN=56;BaseQRankSum=0.020;DP=613;FS=0.488;HRun=0;HaplotypeScore=264.9300;InbreedingCoeff=0.0525;MQ=39.39;MQ0=14;MQRankSum=-2.368;QD=7.50;ReadPosRankSum=5.416;VQSLOD=1.3844;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:5,29:40:0.13:0,0,19	1/1:13,0:12:23.59:183,24,0	0/0:9,0:6:8.74:0,9,64	0/0:11,0:8:20.79:0,21,181	1/1:33,0:33:0.66:2,1,0	0/1:10,0:12:19.40:61,0,19	0/0:3,0:2:2.94:0,3,18	1/1:38,0:26:56.49:420,56,0	0/1:5,0:6:2.07:2,0,79	1/1:37,0:36:73.32:563,73,0	1/1:25,0:25:3.94:21,4,0	0/0:7,0:7:11.81:0,12,76	0/1:33,0:33:48.15:403,0,48	0/1:19,0:19:26.96:412,0,27	1/1:30,0:30:21.47:143,21,0	1/1:18,0:18:17.70:132,18,0	1/1:6,0:6:8.76:53,9,0	0/1:3,0:3:20.30:33,0,20	1/1:18,0:15:20.32:176,20,0	0/1:47,0:47:17.70:398,0,18	0/1:27,0:26:62.41:235,0,62	1/1:19,0:20:2.84:20,3,0	0/0:19,0:19:10.20:0,10,47	0/0:3,0:3:2.92:0,3,17	0/1:56,0:58:99:236,0,270	0/1:34,0:33:99:381,0,142	0/1:28,0:29:99:250,0,110	0/1:13,0:13:76.64:83,0,77
chr10	39921411	.	ATC	A	2357.21	PASS	AB=0.902;AC=20;AF=0.370;AN=54;BaseQRankSum=7.746;DP=546;FS=39.899;HRun=0;HaplotypeScore=194.4246;InbreedingCoeff=0.6769;MQ=48.97;MQ0=2;MQRankSum=-10.138;QD=12.03;ReadPosRankSum=1.180;VQSLOD=1.5599;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:33.11:0,33,593	0/1:5,5:10:1.42:41,0,1	0/0:28,0:23:58.47:0,58,1091	0/0:28,0:25:52.04:0,52,831	1/1:6,16:22:3.01:43,3,0	0/1:8,0:8:6.33:6,0,11	0/0:4,0:4:2.67:0,3,14	0/0:34,0:33:93.32:0,93,1684	0/0:11,0:11:10.05:0,10,67	1/1:7,24:29:31.95:948,32,0	1/1:3,10:13:12.04:171,12,0	0/0:6,0:6:3.01:0,3,31	0/0:34,0:34:87.30:0,87,1577	0/0:28,0:28:75.26:0,75,1372	1/1:5,23:28:26.08:347,26,0	1/1:4,15:19:38.25:549,38,0	1/1:0,8:8:15.05:214,15,0	1/1:1,4:5:9.03:129,9,0	0/0:21,0:21:60.19:0,60,1055	0/0:27,0:27:54.18:0,54,970	0/0:38,0:38:60.14:0,60,1099	1/1:4,8:12:5.72:85,6,0	0/1:9,0:9:0.11:0,0,1	./.	0/0:22,0:22:39.13:0,39,702	0/1:29,2:31:8.14:8,0,1143	0/0:21,0:21:45.14:0,45,790	0/0:10,0:10:24.08:0,24,439
chr10	39921413	.	CTCTA	C	247.01	PASS	AB=0.934;AC=11;AF=0.204;AN=54;BaseQRankSum=6.105;DP=545;FS=0.000;HRun=0;HaplotypeScore=213.2436;InbreedingCoeff=0.3585;MQ=49.01;MQ0=2;MQRankSum=-5.298;QD=2.11;ReadPosRankSum=-2.849;VQSLOD=1.9805;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:33.11:0,33,902	0/1:9,1:10:22.09:89,0,22	0/0:26,1:22:56.76:0,57,1603	0/0:28,0:25:47.36:0,47,1114	0/0:20,2:22:2.79:0,3,13	1/1:7,0:7:8.62:101,9,0	1/1:4,0:4:3:26,3,0	0/0:38,0:37:99:0,102,2576	1/1:10,1:11:3.32:42,3,0	0/1:26,3:27:22.64:23,0,302	0/0:13,0:13:10.92:0,11,60	0/0:6,0:6:1.82:0,2,5	0/0:31,0:31:87.21:0,87,2297	0/0:28,0:28:78.27:0,78,2096	0/1:26,3:29:77.65:98,0,78	0/1:17,1:18:0.82:1,0,128	0/0:8,0:8:14.39:0,14,79	0/0:6,0:6:11.69:0,12,77	0/0:22,0:22:63.22:0,63,1613	0/0:25,0:25:54.19:0,54,1490	0/0:40,0:40:60.21:0,60,1688	0/0:9,2:11:5.68:0,6,31	0/1:9,0:9:0.11:0,0,0	./.	0/0:22,0:22:38.41:0,38,1005	0/0:31,0:31:44.02:0,44,1812	0/0:22,0:22:48.08:0,48,1203	0/0:10,0:10:24.08:0,24,669
chr10	39921443	.	GTCCGTCCA	G	2150.25	PASS	AB=0.961;AC=25;AF=0.446;AN=56;BaseQRankSum=6.026;DP=519;FS=1.110;HRun=0;HaplotypeScore=187.9561;InbreedingCoeff=0.1516;MQ=49.00;MQ0=5;MQRankSum=-5.679;QD=7.49;ReadPosRankSum=-2.832;VQSLOD=2.4076;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:78.19:0,78,2364	0/0:4,2:6:5.85:0,6,17	0/0:15,0:11:10.29:0,10,710	0/1:17,0:10:19.99:20,0,356	1/1:10,7:17:2.50:13,2,0	0/1:9,0:9:20.11:72,0,20	0/0:11,0:11:0.47:0,0,1	1/1:25,0:25:4.56:199,5,0	0/1:18,0:18:41.77:90,0,42	0/1:10,7:17:43.75:471,0,44	1/1:7,2:9:0.59:61,1,0	0/1:12,0:12:6.13:67,0,6	0/0:40,0:40:96.10:0,96,3054	0/0:29,0:29:66.21:0,66,2472	1/1:15,13:28:10.51:281,11,0	1/1:10,9:19:12.91:390,13,0	1/1:6,5:11:4.37:125,4,0	1/1:4,3:7:14.29:195,14,0	0/1:14,0:13:28.32:28,0,78	0/1:19,0:19:45.49:105,0,45	0/0:54,0:53:38.14:0,38,228	0/0:6,4:10:6.06:0,6,17	1/1:18,0:18:5.62:34,6,0	0/0:3,0:3:0.47:0,0,1	0/0:16,0:16:6.27:0,6,49	0/1:29,2:31:99:159,0,154	0/1:16,0:16:10.77:11,0,93	0/0:8,0:8:14.64:0,15,87
chr10	39921447	.	GTCCA	G	5258.20	PASS	AB=1.000;AC=34;AF=0.607;AN=56;BaseQRankSum=5.848;DP=533;FS=23.661;HRun=0;HaplotypeScore=158.0952;InbreedingCoeff=0.4811;MQ=48.21;MQ0=6;MQRankSum=-1.283;QD=14.33;ReadPosRankSum=1.161;VQSLOD=2.5197;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:84.03:0,84,1630	0/0:5,0:5:5.89:0,6,17	0/1:17,0:13:2.39:2,0,525	0/0:16,0:9:3.46:0,3,311	1/1:15,0:15:2.51:12,3,0	0/1:9,0:9:4.40:4,0,12	0/0:14,0:14:8.83:0,9,64	1/1:0,24:24:55.50:462,56,0	0/1:20,0:20:18:18,0,52	0/1:22,0:22:24.51:338,0,25	1/1:8,0:8:1.73:36,2,0	0/1:13,0:13:2.02:2,0,27	0/0:41,0:41:99:0,108,2026	0/0:28,0:28:68.87:0,69,1570	1/1:31,0:31:31.90:233,32,0	1/1:19,0:19:22.91:275,23,0	1/1:13,0:13:13.60:132,14,0	1/1:8,0:8:13.53:119,14,0	1/1:2,11:12:29.61:428,30,0	1/1:12,7:19:35.99:492,36,0	1/1:3,48:50:39.13:732,39,0	0/1:11,0:11:4.07:18,0,4	0/0:20,0:20:1.98:0,2,6	0/0:3,0:3:0.47:0,0,1	1/1:0,19:19:11.32:224,11,0	1/1:3,26:29:73.78:1007,74,0	1/1:11,7:18:37.70:440,38,0	1/1:0,8:8:15.05:283,15,0
chr10	39921487	.	GTCCA	G	4888.73	PASS	AB=0.820;AC=25;AF=0.521;AN=48;BaseQRankSum=-2.356;DP=715;FS=1.671;HRun=0;HaplotypeScore=199.5305;InbreedingCoeff=0.6423;MQ=47.56;MQ0=18;MQRankSum=2.143;QD=12.41;ReadPosRankSum=2.066;VQSLOD=4.4435;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:34,15:49:71.50:1077,72,0	0/1:8,1:9:27.69:28,0,256	./.	./.	1/1:17,8:24:17.54:275,18,0	1/1:7,0:11:2.96:26,3,0	./.	./.	1/1:17,0:22:13.61:138,14,0	0/0:28,0:27:42.07:0,42,757	0/0:16,0:15:16.30:0,16,342	1/1:8,0:20:14.95:132,15,0	1/1:19,26:45:60.05:924,60,0	1/1:16,13:30:30.09:434,30,0	1/1:22,16:37:37.48:597,37,0	1/1:8,15:23:36.12:546,36,0	0/1:9,17:26:24.05:342,0,24	0/0:13,0:13:27.09:0,27,545	0/1:25,0:21:1.35:1,0,140	0/0:29,0:29:21:0,21,478	0/0:66,0:63:32.15:0,32,845	1/1:7,15:22:23.59:369,24,0	0/1:9,0:28:0.30:0,0,1	0/0:4,0:13:0.47:0,0,1	0/1:20,0:20:0.74:1,0,54	0/0:35,0:34:42.05:0,42,639	0/0:21,0:21:42.14:0,42,797	0/0:12,0:12:15.05:0,15,301
chr10	39922558	.	CT	C	4861.40	PASS	AB=0.786;AC=46;AF=0.821;AN=56;BaseQRankSum=2.720;DP=469;FS=6.324;HRun=12;HaplotypeScore=62.8319;InbreedingCoeff=0.6344;MQ=68.90;MQ0=5;MQRankSum=-1.388;QD=11.55;ReadPosRankSum=1.968;VQSLOD=4.4954;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,1:22:30.92:0,31,489	1/1:1,0:7:12.22:35,12,0	0/1:11,0:9:11.96:12,0,92	0/0:8,0:7:5.22:0,5,44	1/1:4,0:31:50.90:147,51,0	1/1:4,13:18:37.89:284,38,0	1/1:3,8:11:1.41:160,1,0	1/1:11,25:37:70.68:538,71,0	0/1:2,6:8:3.06:118,0,3	1/1:4,0:19:28.28:82,28,0	1/1:2,0:11:18.32:53,18,0	1/1:3,13:16:32.86:255,33,0	0/0:14,0:14:12.82:0,13,307	0/0:4,0:4:9.02:0,9,91	1/1:4,0:17:20.36:59,20,0	1/1:2,0:16:26.48:77,26,0	1/1:4,0:25:38.70:112,39,0	1/1:6,0:19:26.46:76,26,0	1/1:1,9:11:28.92:215,29,0	1/1:6,34:41:67.12:690,67,0	1/1:1,6:7:1.51:120,2,0	1/1:1,0:9:14.25:41,14,0	1/1:5,19:25:55.80:424,56,0	1/1:0,5:5:14.94:116,15,0	1/1:7,16:23:47.79:371,48,0	1/1:1,21:25:65.84:476,66,0	1/1:2,17:20:43.87:331,44,0	1/1:2,3:5:8.94:70,9,0
chr10	39923878	.	GCACACA	G	2259.20	PASS	AB=1.000;AC=12;AF=0.231;AN=52;BaseQRankSum=-2.553;DP=572;FS=10.424;HRun=0;HaplotypeScore=147.5629;InbreedingCoeff=0.6369;MQ=56.08;MQ0=13;MQRankSum=-5.291;QD=14.30;ReadPosRankSum=-0.041;VQSLOD=2.3549;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:33:15.30:0,15,196	0/0:5,0:5:2.88:0,3,81	0/0:14,0:5:3.01:0,3,46	./.	0/0:8,0:20:5.89:0,6,115	0/0:23,0:23:45.63:0,46,1264	0/0:32,0:33:27.09:0,27,716	0/1:18,0:16:24.99:108,0,25	0/0:13,0:13:33.10:0,33,854	0/0:21,0:18:39.13:0,39,914	0/0:18,0:18:11.08:0,11,221	0/0:18,0:18:33.11:0,33,913	0/0:12,0:12:24.08:0,24,679	0/0:23,0:23:30:0,30,830	0/0:12,0:12:11.70:0,12,248	0/0:5,0:11:6.02:0,6,133	0/1:10,0:23:1:1,0,223	0/0:25,0:25:42.03:0,42,727	1/1:10,12:18:26.32:506,26,0	1/1:7,20:29:12.93:252,13,0	0/0:18,22:41:0.40:0,0,6	0/0:10,0:14:5.23:0,5,116	0/0:15,0:15:20.75:0,21,468	0/0:32,0:32:48.12:0,48,1318	1/1:6,17:22:9.03:188,9,0	1/1:7,14:22:39.13:743,39,0	1/1:2,18:21:32.99:624,33,0	./.
chr10	39924886	.	TA	T	6895.85	PASS	AB=0.915;AC=37;AF=0.661;AN=56;BaseQRankSum=7.488;DP=525;FS=11.986;HRun=11;HaplotypeScore=71.8770;InbreedingCoeff=0.7862;MQ=76.08;MQ0=0;MQRankSum=-1.359;QD=18.69;ReadPosRankSum=2.256;VQSLOD=5.3356;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:57.11:0,57,586	1/1:0,12:12:35.96:296,36,0	0/0:15,0:13:7.57:0,8,64	0/1:11,0:10:2.38:2,0,88	1/1:4,23:27:68.92:567,69,0	0/0:19,0:19:54.14:0,54,576	0/1:10,2:12:22.24:22,0,189	1/1:3,29:32:83.76:677,84,0	0/0:13,0:13:27.07:0,27,288	1/1:1,21:22:59.87:492,60,0	1/1:3,22:25:59.90:493,60,0	0/0:25,0:25:66.13:0,66,678	0/1:14,2:16:10.19:10,0,312	0/0:17,0:17:51.13:0,51,543	1/1:5,21:26:30.94:461,31,0	1/1:0,14:14:38.96:320,39,0	1/1:3,18:21:50.94:419,51,0	1/1:1,8:9:23.97:197,24,0	1/1:1,10:11:29.94:243,30,0	1/1:4,22:26:62.86:512,63,0	1/1:2,8:10:23.91:190,24,0	1/1:0,12:12:35.96:296,36,0	0/0:25,0:25:61.01:0,61,621	0/0:19,0:19:54.10:0,54,564	1/1:3,20:24:61.97:499,62,0	1/1:5,17:22:41.85:338,42,0	1/1:0,27:27:80.91:665,81,0	1/1:1,9:10:23.96:197,24,0
chr10	39926393	.	TA	T	4992.58	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=3.445;DP=605;FS=3.829;HRun=1;HaplotypeScore=71.3114;InbreedingCoeff=0.9960;MQ=86.31;MQ0=0;MQRankSum=-2.157;QD=37.26;ReadPosRankSum=3.281;VQSLOD=5.5636;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:45.14:0,45,692	0/0:6,0:6:18.06:0,18,273	0/0:19,0:19:27.47:0,27,751	0/0:21,0:21:61.72:0,62,852	0/0:32,0:32:78.11:0,78,1196	1/1:0,28:28:72.24:1007,72,0	1/1:0,28:28:78.26:1091,78,0	0/0:30,0:30:90.29:0,90,1388	1/1:0,22:22:54.18:755,54,0	0/0:47,0:47:99:0,141,2230	0/0:12,0:12:36.11:0,36,539	1/1:0,16:16:45.15:629,45,0	0/0:23,0:23:69.24:0,69,1102	0/0:23,0:23:69.18:0,69,1066	0/0:21,0:21:63.21:0,63,1007	0/0:18,0:18:54.18:0,54,863	0/0:13,0:13:39.12:0,39,597	0/0:10,0:10:30.10:0,30,479	0/0:18,0:18:54.18:0,54,862	0/0:31,0:31:93.32:0,93,1480	0/0:23,0:23:69.24:0,69,1103	0/0:25,0:25:75.26:0,75,1193	1/1:0,31:31:84.28:1174,84,0	1/1:0,9:9:24.08:336,24,0	0/0:23,0:23:69.24:0,69,1098	0/0:24,0:24:72.23:0,72,1120	0/0:31,0:31:93.27:0,93,1410	0/0:6,0:6:18.06:0,18,288
chr10	39926691	.	G	GGAGAGAGA	7578.12	PASS	AC=48;AF=0.923;AN=52;BaseQRankSum=-2.671;DP=524;FS=0.000;HRun=0;HaplotypeScore=168.6947;InbreedingCoeff=0.3671;MQ=55.69;MQ0=7;MQRankSum=-1.290;QD=16.44;ReadPosRankSum=-2.414;VQSLOD=3.3889;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:15:4.33:538,4,0	./.	0/0:18,0:11:0:0,0,0	./.	1/1:26,0:25:8.82:198,9,0	1/1:19,0:18:9:162,9,0	1/1:15,0:13:5.96:45,6,0	1/1:30,0:29:24.27:468,24,0	1/1:14,0:14:6.01:127,6,0	1/1:19,0:18:24.08:560,24,0	1/1:18,0:17:6:72,6,0	1/1:13,1:24:11.97:276,12,0	1/1:16,4:20:6.02:197,6,0	1/1:16,0:17:15.05:373,15,0	1/1:17,0:17:9.02:248,9,0	1/1:27,0:27:27.09:714,27,0	1/1:15,0:14:15.94:406,16,0	1/1:6,0:5:3.01:100,3,0	1/1:11,0:13:11.73:200,12,0	1/1:22,0:23:6.02:177,6,0	1/1:16,0:15:12.04:285,12,0	0/0:9,0:17:15.05:0,15,279	1/1:10,6:17:5.82:118,6,0	1/1:8,6:14:6.02:245,6,0	1/1:28,0:27:18.04:379,18,0	1/1:23,5:29:41.35:1008,41,0	1/1:25,0:27:4.97:505,5,0	1/1:7,0:7:9.01:178,9,0
chr10	39927318	.	AT	A	1064.31	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=7.168;DP=477;FS=6.546;HRun=10;HaplotypeScore=47.5505;InbreedingCoeff=0.9519;MQ=68.15;MQ0=0;MQRankSum=1.028;QD=19.01;ReadPosRankSum=1.620;VQSLOD=4.2960;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:72.03:0,72,778	1/1:0,5:5:15:130,15,0	0/0:6,0:6:6.02:0,6,66	0/0:13,0:11:9.99:0,10,112	0/0:15,0:15:39.09:0,39,423	0/0:19,0:19:47.92:0,48,511	0/0:9,0:9:21.04:0,21,223	0/0:31,1:32:81.20:0,81,883	0/0:11,0:11:24.06:0,24,265	1/1:3,10:13:29.99:260,30,0	1/1:1,19:20:50.97:441,51,0	0/0:18,0:19:41.74:0,42,443	0/0:21,0:22:53.98:0,54,576	0/0:14,0:14:33.08:0,33,358	0/0:18,0:18:51.14:0,51,564	0/0:20,0:21:57.10:0,57,608	0/0:14,0:14:36.08:0,36,383	1/1:4,14:18:44.98:390,45,0	0/0:18,0:18:42.11:0,42,465	0/0:24,0:25:56.99:0,57,611	0/0:12,0:12:30.08:0,30,331	0/0:10,0:10:27.04:0,27,286	0/0:21,0:21:57.13:0,57,615	0/0:17,0:17:42.11:0,42,457	0/0:13,0:13:39.05:0,39,410	0/0:25,1:27:43.12:0,43,697	0/0:23,0:24:65.99:0,66,699	0/0:12,0:12:36.10:0,36,398
chr10	39927479	.	TTTTTTTTTTC	T	1923.95	PASS	AB=0.781;AC=12;AF=0.214;AN=56;BaseQRankSum=5.285;DP=457;FS=3.317;HRun=0;HaplotypeScore=119.9615;InbreedingCoeff=0.4246;MQ=66.03;MQ0=11;MQRankSum=1.412;QD=15.39;ReadPosRankSum=-0.389;VQSLOD=2.4155;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:30:34.48:0,34,1566	0/0:17,0:17:14.67:0,15,1366	0/0:19,0:9:11.94:0,12,91	0/0:15,0:9:1.68:0,2,87	0/0:20,0:19:45.15:0,45,1941	0/0:18,0:18:6.01:0,6,238	0/0:12,0:12:14.22:0,14,514	0/1:27,2:29:22.18:430,0,22	0/0:9,0:9:15.04:0,15,472	0/0:19,0:16:42.07:0,42,1437	0/0:21,0:21:45.56:0,46,1573	0/0:13,0:13:19.94:0,20,733	0/0:13,0:13:8.99:0,9,280	0/0:12,0:12:12.02:0,12,418	0/0:6,0:6:9.03:0,9,401	0/0:21,0:21:39.11:0,39,1613	0/0:23,0:23:60.18:0,60,2258	0/0:19,0:17:41.16:0,41,1825	0/1:7,11:17:99:283,0,123	1/1:4,14:18:30.63:475,31,0	0/1:8,0:8:17.22:24,0,17	0/0:10,0:10:15.02:0,15,610	0/0:18,0:18:9.36:0,9,651	0/0:15,0:14:15.87:0,16,435	1/1:5,12:17:14.68:235,15,0	0/1:4,13:16:99:356,0,223	1/1:3,9:12:8.96:194,9,0	1/1:3,3:5:3.01:88,3,0
chr10	39927484	.	TTTTTC	T	987.39	PASS	AB=0.969;AC=16;AF=0.286;AN=56;BaseQRankSum=5.366;DP=448;FS=18.565;HRun=0;HaplotypeScore=85.4012;InbreedingCoeff=0.0546;MQ=62.55;MQ0=21;MQRankSum=-0.471;QD=5.46;ReadPosRankSum=-2.293;VQSLOD=0.2062;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:29:34.26:0,34,766	0/0:17,0:17:38.51:0,39,816	0/0:17,0:7:11.33:0,11,88	0/0:16,0:8:6.08:0,6,57	0/0:20,0:18:48.15:0,48,1008	0/0:16,0:16:8.34:0,8,105	0/1:14,0:13:99:133,0,199	0/1:25,0:24:59.11:319,0,59	0/1:10,0:10:21.87:22,0,181	0/0:20,0:15:41.94:0,42,855	0/0:22,0:22:49.06:0,49,916	0/1:10,0:10:6.11:6,0,374	0/0:15,0:15:5.60:0,6,136	0/0:12,0:12:12.04:0,12,239	0/0:9,0:9:17.36:0,17,277	0/0:19,0:19:38.58:0,39,869	0/0:24,0:24:65.94:0,66,1148	0/0:20,0:16:41.57:0,42,968	0/1:16,0:15:68.80:69,0,121	0/1:15,0:15:7.37:174,0,7	0/1:7,0:7:1.77:2,0,18	0/0:9,0:9:15:0,15,350	0/1:11,6:17:3.03:3,0,258	0/1:18,1:18:76.71:77,0,180	1/1:16,0:15:7.32:108,7,0	0/1:16,0:15:99:103,0,151	1/1:12,0:12:3.13:82,3,0	1/1:4,0:3:3.01:43,3,0
chr10	39929317	.	CA	C	644.37	PASS	AC=16;AF=0.364;AN=44;BaseQRankSum=-4.735;DP=337;FS=0.000;HRun=11;HaplotypeScore=38.4773;InbreedingCoeff=0.6431;MQ=23.37;MQ0=164;MQRankSum=-1.066;QD=5.81;ReadPosRankSum=1.114;VQSLOD=0.3440;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	1/1:0,4:3:5.99:49,6,0	./.	./.	1/1:2,19:15:11.02:80,11,0	0/0:3,0:6:11.48:0,11,61	0/0:1,0:2:2.96:0,3,19	0/0:6,0:1:2.84:0,3,14	0/0:1,0:4:8.52:0,9,43	1/1:5,14:13:7.25:177,7,0	1/1:4,14:12:14.93:121,15,0	0/0:11,0:4:0:0,0,0	0/0:3,5:6:0:0,0,0	1/1:1,9:5:2.99:25,3,0	1/1:3,16:11:26.84:221,27,0	1/1:1,8:4:8.99:74,9,0	./.	./.	0/0:6,0:3:2.84:0,3,14	0/0:9,0:18:32.82:0,33,172	./.	1/1:1,8:6:5.99:49,6,0	0/0:8,0:4:6.01:0,6,64	0/0:7,0:1:3.01:0,3,32	0/0:6,0:14:5.81:0,6,34	0/0:6,1:12:25.93:0,26,157	0/0:6,0:15:17.17:0,17,91	0/0:0,0:7:8.56:0,9,43
chr10	39929662	.	G	GT	1503.88	PASS	AC=16;AF=0.308;AN=52;BaseQRankSum=-3.565;DP=278;FS=0.000;HRun=6;HaplotypeScore=27.5483;InbreedingCoeff=0.7032;MQ=23.58;MQ0=126;MQRankSum=0.778;QD=15.35;ReadPosRankSum=-3.199;VQSLOD=1.4108;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:3:6.01:0,6,61	0/0:7,0:6:18.04:0,18,184	./.	./.	0/0:15,0:8:6.01:0,6,61	0/0:10,0:7:15.03:0,15,153	0/0:9,0:2:3:0,3,31	1/1:6,12:4:12.04:151,12,0	0/0:7,0:7:11.88:0,12,122	0/0:9,0:7:18.04:0,18,184	0/0:11,0:6:12.03:0,12,122	0/0:6,0:5:6.01:0,6,61	0/0:11,0:7:15.03:0,15,153	0/0:9,0:5:8.91:0,9,92	0/0:13,0:9:12.03:0,12,122	0/0:13,0:6:9.02:0,9,92	0/0:8,0:2:6.01:0,6,61	0/0:1,0:1:3.01:0,3,31	1/1:4,6:5:6.02:75,6,0	1/1:0,15:14:39:437,39,0	1/1:1,8:1:3.01:38,3,0	0/0:6,0:4:6.01:0,6,61	0/0:11,0:6:3.01:0,3,31	0/0:8,0:1:3.01:0,3,31	1/1:0,11:8:18.06:227,18,0	1/1:1,12:9:27.09:340,27,0	1/1:3,11:12:21.06:264,21,0	1/1:2,6:6:12.04:151,12,0
chr10	39931150	.	GAAACCCTGTCTCAT	G	8004.99	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=12.649;DP=515;FS=0.522;HRun=0;HaplotypeScore=197.1586;InbreedingCoeff=0.9761;MQ=56.94;MQ0=2;MQRankSum=-12.280;QD=76.97;ReadPosRankSum=-0.571;VQSLOD=4.5537;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:78.27:0,78,4941	0/0:5,0:5:9.03:0,9,628	0/0:18,0:15:39.13:0,39,2051	0/0:26,0:23:60.20:0,60,3231	0/0:24,0:24:69.24:0,69,4594	0/0:23,0:23:66.23:0,66,4206	0/0:23,0:23:51.16:0,51,3114	1/1:6,10:16:30.09:1086,30,0	0/0:10,0:10:30.10:0,30,2077	0/0:23,0:23:66.23:0,66,4540	0/0:18,0:18:51.18:0,51,3467	0/0:23,0:23:66.17:0,66,4074	0/0:18,0:18:54.19:0,54,3515	0/0:17,0:17:39.13:0,39,2622	0/0:27,0:27:75.26:0,75,4887	0/0:19,0:19:45.15:0,45,3092	0/0:21,0:21:57.20:0,57,3650	0/0:21,0:21:57.20:0,57,3825	1/1:3,7:10:21.01:670,21,0	1/1:4,6:10:21.07:875,21,0	1/1:7,6:13:15.05:625,15,0	0/0:14,0:14:39.11:0,39,2502	0/0:15,0:15:42.14:0,42,2606	0/0:35,0:35:87.24:0,87,5541	1/1:5,13:18:33.11:1375,33,0	1/1:4,10:14:30.10:1250,30,0	1/1:5,14:19:42.14:1750,42,0	1/1:0,4:4:9.03:375,9,0
chr10	39931265	.	T	TCCCCCC	10625.81	PASS	AB=0.928;AC=43;AF=0.796;AN=54;BaseQRankSum=3.070;DP=331;FS=7.652;HRun=3;HaplotypeScore=88.5012;InbreedingCoeff=0.5877;MQ=36.07;MQ0=21;MQRankSum=-6.023;QD=41.03;ReadPosRankSum=2.523;VQSLOD=1.5880;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:24:54.17:0,54,1074	1/1:7,0:6:11.66:314,12,0	0/1:14,0:3:11.04:11,0,40	0/0:26,0:1:2.74:0,3,12	1/1:10,1:16:30.09:783,30,0	1/1:9,10:20:18.06:487,18,0	1/1:11,5:16:30.10:781,30,0	1/1:8,0:5:9.02:162,9,0	1/1:3,6:8:14.40:460,14,0	1/1:10,0:11:24.08:655,24,0	1/1:4,0:6:6.02:153,6,0	1/1:5,10:14:27.09:761,27,0	0/0:9,0:8:21.06:0,21,391	0/0:10,0:10:19.21:0,19,314	1/1:9,0:16:42.04:1152,42,0	1/1:6,0:9:27.06:712,27,0	0/1:13,0:17:31.19:900,0,31	1/1:12,1:9:21.07:655,21,0	1/1:5,0:8:18.03:453,18,0	1/1:4,0:2:3.01:104,3,0	./.	1/1:6,0:9:15.05:423,15,0	1/1:7,5:11:18.06:534,18,0	1/1:6,1:5:6.02:136,6,0	1/1:3,0:5:9.02:164,9,0	0/1:3,0:2:0:0,0,0	1/1:5,0:9:17.89:429,18,0	1/1:6,0:7:15.05:397,15,0
chr10	39931302	.	T	TAA	4000.58	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=-6.162;DP=550;FS=19.102;HRun=8;HaplotypeScore=80.5774;InbreedingCoeff=0.8619;MQ=59.42;MQ0=19;MQRankSum=-0.182;QD=19.14;ReadPosRankSum=0.373;VQSLOD=0.6833;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:51.09:0,51,568	1/1:3,0:3:2.98:21,3,0	0/1:48,0:12:22.47:22,0,140	0/0:54,0:10:16.38:0,16,129	1/1:8,8:18:26.88:367,27,0	0/0:15,0:15:27.01:0,27,292	0/0:21,0:21:51.11:0,51,559	0/0:35,0:35:84.19:0,84,928	0/0:9,0:8:21.05:0,21,234	1/1:7,13:19:33.11:524,33,0	1/1:5,15:19:45.11:686,45,0	0/0:26,0:26:54.05:0,54,592	0/0:12,0:12:24.04:0,24,267	0/0:13,0:13:16.29:0,16,198	1/1:10,8:17:29.59:429,30,0	1/1:7,14:21:38.41:579,38,0	1/1:9,11:19:33.07:496,33,0	1/1:9,17:25:45.11:686,45,0	0/0:21,0:16:45.12:0,45,501	0/0:9,0:9:21.06:0,21,234	0/0:9,0:8:18.04:0,18,200	1/1:7,5:11:12.04:190,12,0	0/0:8,0:8:21.06:0,21,234	0/0:7,0:9:4.85:0,5,124	0/0:14,0:14:27.05:0,27,301	0/0:15,0:15:36.08:0,36,401	0/0:17,0:17:45.10:0,45,491	0/0:26,0:22:63.14:0,63,690
chr10	39931612	.	GATTTATTTATTTATTTATTTATTT	G	3491.10	PASS	AB=0.729;AC=20;AF=0.500;AN=40;BaseQRankSum=3.955;DP=255;FS=7.785;HRun=0;HaplotypeScore=151.9231;InbreedingCoeff=0.4707;MQ=69.59;MQ0=3;MQRankSum=-2.638;QD=24.24;ReadPosRankSum=-1.955;VQSLOD=1.8659;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:13:1.10:0,1,99	1/1:2,0:3:2.22:7,2,0	./.	./.	0/0:7,0:10:9.03:0,9,182	0/1:10,0:12:99:157,0,133	./.	1/1:20,11:31:30.08:455,30,0	./.	0/0:11,0:13:4.16:0,4,198	0/1:2,0:5:12.69:13,0,43	1/1:7,0:7:3.01:33,3,0	0/0:5,0:5:6.01:0,6,105	0/0:5,0:5:3.01:0,3,87	0/0:12,0:11:9.03:0,9,370	0/0:10,0:12:9.03:0,9,489	0/0:10,0:12:18.02:0,18,371	1/1:9,0:14:4.44:14,4,0	1/1:13,0:12:8.86:107,9,0	./.	./.	0/0:5,0:4:3.01:0,3,114	./.	./.	1/1:8,5:13:6.02:375,6,0	1/1:5,6:11:15.05:832,15,0	1/1:6,8:14:9.03:563,9,0	1/1:8,12:19:15.05:936,15,0
chr10	39931641	.	AT	A	283.61	PASS	AB=0.940;AC=11;AF=0.250;AN=44;BaseQRankSum=6.752;DP=138;FS=1.990;HRun=3;HaplotypeScore=45.4238;InbreedingCoeff=0.0258;MQ=48.43;MQ0=2;MQRankSum=-3.822;QD=4.81;ReadPosRankSum=6.944;VQSLOD=0.4901;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:6:3.79:0,4,79	1/1:1,0:1:1.55:4,2,0	./.	./.	0/0:7,0:7:7.88:0,8,122	0/0:9,0:9:7.55:0,8,140	./.	0/1:13,0:13:99:198,0,171	./.	0/0:4,0:4:6.80:0,7,123	0/0:6,0:5:1.99:0,2,76	1/1:1,1:2:3.01:33,3,0	0/0:3,0:3:9.02:0,9,108	0/0:1,0:1:3.01:0,3,43	0/0:7,0:7:12.04:0,12,167	0/0:4,0:4:2.70:0,3,42	0/0:14,0:14:33.74:0,34,439	0/0:9,0:9:4.86:0,5,110	0/1:4,3:7:65.99:92,0,66	0/0:1,0:1:3.01:0,3,42	./.	0/0:1,0:1:3.01:0,3,42	0/0:1,0:1:3.01:0,3,41	./.	0/1:8,0:8:5.84:6,0,33	0/1:7,0:7:11.70:12,0,47	1/1:8,0:8:6.66:20,7,0	0/1:13,0:13:25.14:39,0,25
chr10	39931680	.	C	CT	499.91	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-1.855;DP=181;FS=0.906;HRun=9;HaplotypeScore=41.7111;InbreedingCoeff=0.6513;MQ=56.59;MQ0=2;MQRankSum=-0.533;QD=19.23;ReadPosRankSum=0.290;VQSLOD=3.4353;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:6:8.99:0,9,78	0/0:1,0:1:3:0,3,26	0/0:8,0:5:5.02:0,5,32	0/0:7,0:6:3.98:0,4,77	0/0:5,0:5:11.98:0,12,100	1/1:2,9:11:24.06:265,24,0	1/1:0,2:2:6.02:66,6,0	0/0:17,0:16:35.98:0,36,309	1/1:0,4:4:12.03:130,12,0	0/0:2,0:2:5.98:0,6,48	0/0:8,0:8:24:0,24,208	1/1:0,4:4:3.01:33,3,0	0/0:2,0:2:3:0,3,26	0/0:3,0:3:6:0,6,52	0/0:4,0:4:9:0,9,78	0/0:6,0:6:15:0,15,130	0/0:19,0:19:47.99:0,48,417	0/0:13,0:13:29.99:0,30,260	0/0:11,0:11:32.99:0,33,286	0/0:3,0:3:9:0,9,78	0/0:1,0:1:3:0,3,26	0/0:1,0:1:3:0,3,26	1/1:0,3:3:9.02:100,9,0	1/1:0,2:2:6.01:63,6,0	0/0:9,0:9:21:0,21,182	0/0:7,0:7:21:0,21,182	0/0:8,0:8:21:0,21,182	0/0:13,0:13:20.98:0,21,182
chr10	39932681	.	ATAAT	A	9074.14	PASS	AB=0.510;AC=17;AF=0.304;AN=56;BaseQRankSum=13.916;DP=537;FS=0.345;HRun=0;HaplotypeScore=92.5607;InbreedingCoeff=0.9133;MQ=83.73;MQ0=0;MQRankSum=-4.341;QD=50.98;ReadPosRankSum=3.053;VQSLOD=5.5124;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:81.28:0,81,2289	1/1:0,8:8:21.07:440,21,0	0/0:23,0:23:69.17:0,69,1615	0/0:9,0:9:20.66:0,21,507	1/1:0,26:26:75.01:1314,75,0	0/0:21,0:21:63.12:0,63,1652	0/0:12,0:12:36.12:0,36,1029	0/0:31,0:31:87.18:0,87,2303	0/0:16,0:16:48.16:0,48,1377	1/1:0,23:23:69.15:1253,69,0	1/1:0,25:25:72.11:1378,72,0	0/0:15,0:15:45.15:0,45,1303	0/0:20,0:20:60.17:0,60,1572	0/0:14,0:14:42.13:0,42,1144	1/1:0,22:22:57.20:1194,57,0	0/1:1,24:25:23.67:1194,0,24	1/1:0,10:10:24.08:502,24,0	1/1:0,21:21:45.95:858,46,0	0/0:12,0:12:32.90:0,33,855	0/0:26,0:26:78.25:0,78,2143	0/0:20,0:20:60.21:0,60,1702	1/1:0,18:18:51.05:940,51,0	0/0:20,0:20:60.21:0,60,1722	0/0:7,0:7:21.05:0,21,544	0/0:31,0:31:93.26:0,93,2442	0/0:20,0:20:60.19:0,60,1584	0/0:26,0:25:78.23:0,78,2022	0/0:9,0:9:27.09:0,27,782
chr10	39935778	.	TG	T	4186.94	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=10.395;DP=469;FS=3.473;HRun=3;HaplotypeScore=47.8027;InbreedingCoeff=0.9834;MQ=80.60;MQ0=0;MQRankSum=-1.543;QD=34.60;ReadPosRankSum=-2.459;VQSLOD=2.9806;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:66.20:0,66,930	0/0:5,0:5:15.05:0,15,214	0/0:9,0:9:27.09:0,27,377	0/0:14,0:14:35.66:0,36,423	0/0:14,0:14:39.13:0,39,562	0/0:18,0:18:54.16:0,54,758	0/0:32,0:32:87.29:0,87,1252	1/1:1,9:10:24:254,24,0	0/0:16,0:16:42.12:0,42,586	0/0:15,0:15:42.14:0,42,605	0/0:3,0:3:9.03:0,9,130	0/0:21,0:21:60.20:0,60,863	0/0:20,0:20:57.19:0,57,817	0/0:18,0:18:54.18:0,54,777	0/0:14,0:14:42.14:0,42,605	0/0:14,0:14:42.14:0,42,605	0/0:41,0:41:99:0,123,1732	0/0:29,0:29:87.28:0,87,1233	1/1:1,14:15:42.12:510,42,0	1/1:0,8:8:24.08:298,24,0	1/1:1,38:39:99:1393,114,0	0/0:13,0:13:39.13:0,39,559	0/0:5,0:5:15.05:0,15,216	0/0:25,0:25:62.81:0,63,902	1/1:1,14:15:39.12:484,39,0	1/1:1,13:14:42.12:505,42,0	1/1:0,13:13:39.12:483,39,0	1/1:0,7:7:21.07:260,21,0
chr10	39937334	.	CT	C	5796.11	PASS	AB=1.000;AC=36;AF=0.643;AN=56;BaseQRankSum=-0.096;DP=471;FS=3.547;HRun=11;HaplotypeScore=82.7126;InbreedingCoeff=0.7961;MQ=62.28;MQ0=2;MQRankSum=1.524;QD=16.01;ReadPosRankSum=2.127;VQSLOD=5.7329;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:39.08:0,39,407	1/1:2,8:10:20.97:172,21,0	0/1:9,0:5:1.61:2,0,10	0/0:11,0:8:12:0,12,112	1/1:4,25:30:70.91:572,71,0	0/0:13,0:13:10.67:0,11,64	0/0:10,0:10:7.10:0,7,35	1/1:12,20:33:35.94:491,36,0	0/1:9,0:9:5.54:6,0,51	1/1:7,14:21:41.91:345,42,0	1/1:5,25:30:68.86:563,69,0	0/0:7,0:7:9.78:0,10,35	0/0:11,0:12:23.18:0,23,269	0/0:14,0:15:29.90:0,30,295	1/1:2,10:12:23.97:197,24,0	1/1:2,6:8:17.98:148,18,0	1/1:2,19:21:41.94:345,42,0	1/1:3,20:24:39.82:430,40,0	1/1:5,13:19:37.98:301,38,0	1/1:9,10:19:29.92:246,30,0	1/1:2,3:5:5.97:49,6,0	1/1:1,15:16:44.93:369,45,0	0/0:11,0:11:6.09:0,6,18	0/0:7,0:7:1.60:0,2,4	1/1:6,14:21:9.96:286,10,0	1/1:12,15:27:56.88:467,57,0	1/1:12,21:33:44.94:561,45,0	1/1:4,10:14:29.96:246,30,0
chr10	39937344	.	TTG	T	732.91	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=3.322;DP=450;FS=4.565;HRun=0;HaplotypeScore=111.3287;InbreedingCoeff=0.8089;MQ=54.87;MQ0=3;MQRankSum=-3.837;QD=10.62;ReadPosRankSum=-4.900;VQSLOD=2.1273;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:41.80:0,42,564	0/0:8,0:8:21.67:0,22,94	0/1:7,0:3:9.83:10,0,11	0/0:10,0:6:15.01:0,15,164	0/0:28,0:28:38.19:0,38,235	1/1:11,3:14:7.76:191,8,0	1/1:8,4:11:11.10:171,11,0	0/0:34,0:34:57.68:0,58,422	1/1:7,1:7:10.47:91,10,0	0/0:16,0:16:38.53:0,39,199	0/0:27,0:27:65.81:0,66,343	1/1:6,1:7:0.70:85,1,0	0/0:12,0:12:27.48:0,27,418	0/0:16,0:16:45.03:0,45,574	0/0:10,0:10:21.43:0,21,89	0/0:8,0:8:19.06:0,19,89	0/0:21,0:21:42.64:0,43,188	0/0:24,0:24:47.67:0,48,234	0/0:20,0:20:33.80:0,34,191	0/0:17,0:17:43.46:0,43,236	0/0:6,0:6:11.31:0,11,75	0/0:16,0:16:26.42:0,26,150	1/1:6,6:12:20.92:220,21,0	1/1:7,2:9:10.55:134,11,0	0/0:22,0:22:48.26:0,48,278	0/0:25,0:25:46.31:0,46,267	0/0:33,0:33:52.87:0,53,313	0/0:11,0:10:26.54:0,27,108
chr10	39937352	.	TG	T	348.54	PASS	AB=0.872;AC=10;AF=0.179;AN=56;BaseQRankSum=7.574;DP=450;FS=3.303;HRun=1;HaplotypeScore=106.6397;InbreedingCoeff=0.5508;MQ=52.22;MQ0=4;MQRankSum=-7.740;QD=5.36;ReadPosRankSum=-1.127;VQSLOD=0.0635;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:16:42.12:0,42,540	0/0:9,0:9:27.07:0,27,340	0/1:5,2:3:1.67:2,0,12	0/0:11,0:4:9.39:0,9,96	0/0:24,0:24:72.20:0,72,908	0/1:11,0:11:1.76:77,0,2	1/1:12,0:11:2.30:84,2,0	0/0:37,0:37:94.10:0,94,1192	0/1:6,2:7:8.61:43,0,9	0/0:18,0:18:53.84:0,54,672	0/0:27,0:27:81.02:0,81,998	1/1:4,1:5:10.40:74,10,0	0/0:14,0:14:41.85:0,42,461	0/0:15,0:15:41.48:0,41,507	0/0:12,0:12:33.07:0,33,402	0/0:9,0:9:24.05:0,24,287	0/0:22,0:22:53.15:0,53,625	0/0:24,0:24:63.47:0,63,703	0/0:18,0:18:47.95:0,48,557	0/0:16,0:16:48.11:0,48,544	0/0:7,0:7:15.03:0,15,176	0/0:14,0:14:42.11:0,42,520	1/1:12,0:12:17.52:127,18,0	0/1:9,1:10:18.11:87,0,18	0/0:21,0:21:55.36:0,55,644	0/0:23,0:23:64.98:0,65,680	0/0:35,0:35:72.92:0,73,896	0/0:12,0:11:30.09:0,30,368
chr10	39937359	.	TG	T	480.80	PASS	AB=0.855;AC=10;AF=0.179;AN=56;BaseQRankSum=7.733;DP=472;FS=6.086;HRun=1;HaplotypeScore=107.8001;InbreedingCoeff=0.5952;MQ=50.82;MQ0=5;MQRankSum=-7.997;QD=8.01;ReadPosRankSum=-0.542;VQSLOD=0.4838;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:20:44.99:0,45,508	0/0:9,0:9:27.07:0,27,316	0/0:12,0:5:4.32:0,4,57	0/0:16,0:4:6.43:0,6,73	0/0:26,0:26:78.18:0,78,895	1/1:11,0:11:2.24:127,2,0	1/1:11,1:11:2.63:111,3,0	0/0:39,0:39:70.36:0,70,875	0/1:6,2:7:18.44:68,0,18	0/0:19,0:19:57.16:0,57,679	0/0:27,0:27:80.98:0,81,913	1/1:6,0:6:11.46:82,11,0	0/0:15,0:15:45.10:0,45,513	0/0:14,0:14:36.09:0,36,439	0/0:11,0:11:33.09:0,33,391	0/0:8,0:8:21.05:0,21,244	0/0:29,0:29:68.81:0,69,699	0/0:19,0:19:41.79:0,42,549	0/0:15,0:15:43.04:0,43,446	0/0:18,0:18:47.52:0,48,481	0/0:9,0:8:14.76:0,15,161	0/0:13,0:13:38.98:0,39,431	1/1:13,0:13:25.05:158,25,0	0/1:9,1:10:16:82,0,16	0/0:23,0:23:56.19:0,56,597	0/0:22,0:21:57.88:0,58,592	0/0:32,2:34:65.62:0,66,770	0/0:12,0:11:29.75:0,30,271
chr10	39937360	.	G	GTT	823.21	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=6.440;DP=467;FS=7.768;HRun=9;HaplotypeScore=116.0188;InbreedingCoeff=0.7866;MQ=50.66;MQ0=5;MQRankSum=-7.150;QD=13.72;ReadPosRankSum=-0.500;VQSLOD=1.1874;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:19:23.67:0,24,292	0/0:9,0:9:24.06:0,24,255	0/0:12,0:5:6.45:0,6,55	0/0:17,0:5:5.59:0,6,42	0/0:26,0:26:72.11:0,72,743	1/1:7,4:11:17.33:270,17,0	1/1:9,3:11:10.36:170,10,0	0/0:39,0:39:74.32:0,74,731	0/1:8,0:7:19.68:38,0,20	0/0:19,0:19:48.10:0,48,511	0/0:26,0:27:66.08:0,66,741	1/1:4,1:6:11.53:97,12,0	0/0:15,0:15:42.10:0,42,444	0/0:14,0:14:36.09:0,36,383	0/0:11,0:11:30.07:0,30,319	0/0:8,0:8:18.04:0,18,192	0/0:29,0:29:60.04:0,60,619	0/0:19,0:19:43.78:0,44,504	0/0:14,0:14:33:0,33,331	0/0:17,0:17:41.17:0,41,427	0/0:10,0:8:14.96:0,15,156	0/0:13,0:13:30.03:0,30,303	1/1:8,5:13:28.94:340,29,0	1/1:9,1:10:8.82:77,9,0	0/0:21,0:22:38.79:0,39,445	0/0:20,0:19:42:0,42,510	0/0:34,0:34:65.23:0,65,695	0/0:11,0:11:5.97:0,6,119
chr10	39937376	.	G	GT	1268.79	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=13.068;DP=458;FS=8.106;HRun=7;HaplotypeScore=103.7303;InbreedingCoeff=0.8491;MQ=53.86;MQ0=10;MQRankSum=-10.851;QD=6.07;ReadPosRankSum=2.431;VQSLOD=0.2876;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:15:29.96:0,30,289	0/0:7,0:7:21.03:0,21,203	0/0:17,0:8:9.69:0,10,114	0/0:27,0:8:1.66:0,2,68	0/0:28,0:28:62.91:0,63,601	1/1:6,0:8:13.51:59,14,0	1/1:12,0:11:0.34:4,0,0	1/1:28,0:31:10.35:142,10,0	1/1:5,0:5:3.19:17,3,0	0/0:17,0:17:45.07:0,45,434	0/0:25,0:25:75.10:0,75,715	1/1:6,0:7:2.80:15,3,0	0/0:16,0:16:42.95:0,43,406	0/0:15,0:14:33.05:0,33,318	0/0:14,0:14:33.05:0,33,318	0/0:7,0:7:15.01:0,15,140	0/0:29,0:28:63.94:0,64,601	0/0:22,0:22:50.38:0,50,490	1/1:13,0:14:21.58:108,22,0	1/1:20,0:20:43.16:188,43,0	1/1:11,0:8:16.46:75,16,0	0/0:7,0:7:21.03:0,21,203	1/1:9,5:14:16.11:164,16,0	1/1:5,3:8:9.49:98,9,0	1/1:23,0:23:43.42:201,43,0	1/1:22,0:21:41.70:176,42,0	1/1:26,0:29:50.18:210,50,0	1/1:3,0:3:5.36:22,5,0
chr10	39937380	.	T	TTG	5618.23	PASS	AB=0.893;AC=18;AF=0.321;AN=56;BaseQRankSum=5.713;DP=461;FS=5.020;HRun=0;HaplotypeScore=95.3991;InbreedingCoeff=0.6869;MQ=53.61;MQ0=12;MQRankSum=-9.093;QD=29.26;ReadPosRankSum=1.723;VQSLOD=6.3032;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:15:33.09:0,33,475	0/0:7,0:7:21.07:0,21,318	0/0:19,0:8:8.55:0,9,183	0/1:26,0:7:8.49:8,0,130	0/0:26,0:26:69.19:0,69,1004	0/1:8,0:8:21.97:22,0,46	0/0:11,0:10:23.03:0,23,137	1/1:13,7:29:47:868,47,0	0/0:6,0:5:6.93:0,7,35	0/0:19,0:19:57.13:0,57,782	0/0:27,0:27:75.25:0,75,1129	0/1:6,0:6:1.85:2,0,48	0/0:16,0:16:45.14:0,45,658	0/0:15,0:14:36.11:0,36,525	0/0:14,0:14:33.11:0,33,499	0/0:6,0:6:17.99:0,18,244	0/0:31,0:30:66.21:0,66,975	0/0:24,0:24:55.31:0,55,814	1/1:5,8:14:38.08:521,38,0	1/1:2,18:22:57.16:966,57,0	1/1:5,6:8:18.06:293,18,0	0/0:7,0:7:21.07:0,21,317	0/0:15,0:15:21.06:0,21,113	0/0:9,0:9:14.50:0,14,73	1/1:2,16:23:51.13:838,51,0	1/1:3,17:20:57.01:945,57,0	1/1:8,18:27:60.20:1055,60,0	0/1:1,3:4:12.76:100,0,13
chr10	39937381	.	T	TG	1772.78	PASS	AB=1.000;AC=18;AF=0.321;AN=56;BaseQRankSum=9.723;DP=458;FS=3.064;HRun=0;HaplotypeScore=99.6496;InbreedingCoeff=0.6344;MQ=53.52;MQ0=13;MQRankSum=-8.443;QD=8.78;ReadPosRankSum=2.431;VQSLOD=3.9707;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:15:33.09:0,33,442	0/0:7,0:7:21.07:0,21,293	0/0:19,0:8:3.96:0,4,156	0/1:27,0:7:3.42:3,0,98	0/0:25,0:25:69.05:0,69,931	0/0:8,0:8:21.50:0,21,108	0/0:10,0:9:20.70:0,21,135	1/1:30,0:29:4.88:270,5,0	0/0:6,0:5:14.11:0,14,84	0/0:19,0:19:57.11:0,57,727	0/0:27,0:27:75.25:0,75,1045	0/0:5,0:6:5.97:0,6,56	0/0:16,0:16:45.13:0,45,609	0/0:14,0:13:36.11:0,36,488	0/0:12,0:12:33.11:0,33,461	0/0:6,0:6:17.99:0,18,227	0/0:32,0:31:66.18:0,66,898	0/0:24,0:25:52.01:0,52,751	1/1:13,1:14:28.17:188,28,0	1/1:22,0:22:47.25:298,47,0	1/1:11,0:8:17.79:145,18,0	0/0:7,0:7:21.07:0,21,293	0/1:13,0:14:40.65:41,0,83	0/1:9,0:9:23.43:23,0,39	1/1:22,1:23:46.98:314,47,0	1/1:20,0:19:42.96:309,43,0	1/1:25,2:27:58.42:350,58,0	0/1:5,0:5:13.03:27,0,13
chr10	39937383	.	TG	T	2552.30	PASS	AB=1.000;AC=30;AF=0.536;AN=56;BaseQRankSum=14.256;DP=454;FS=13.911;HRun=1;HaplotypeScore=94.0853;InbreedingCoeff=0.8634;MQ=53.35;MQ0=13;MQRankSum=-12.811;QD=10.25;ReadPosRankSum=-2.248;VQSLOD=-0.0840;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:15:30.08:0,30,373	0/0:7,0:7:21.07:0,21,271	0/1:18,0:8:11.58:12,0,135	0/1:26,0:7:0.86:1,0,92	0/0:24,0:24:63.17:0,63,799	1/1:7,1:8:23.51:155,24,0	1/1:11,1:11:23.81:181,24,0	1/1:28,0:27:68.36:401,68,0	1/1:7,0:6:14.33:87,14,0	0/0:18,0:18:54.13:0,54,658	0/0:27,0:27:75.14:0,75,905	1/1:5,0:5:4.20:17,4,0	0/0:16,0:16:31.74:0,32,493	0/0:13,0:12:33.11:0,33,422	0/0:12,0:12:33.09:0,33,411	0/0:7,0:7:21.02:0,21,230	0/0:32,1:31:27.81:0,28,739	0/0:24,0:24:52.58:0,53,669	1/1:15,0:15:43.97:276,44,0	1/1:22,0:22:57.96:326,58,0	1/1:10,0:7:17.56:107,18,0	0/0:7,0:7:21.07:0,21,271	1/1:13,0:13:25.80:136,26,0	1/1:9,0:9:15.29:83,15,0	1/1:22,0:22:46.30:256,46,0	1/1:20,0:19:53.38:309,53,0	1/1:26,2:28:57.45:327,57,0	1/1:6,0:6:14.76:99,15,0
chr10	39937454	.	C	CTCTA	3427.12	PASS	AC=12;AF=0.222;AN=54;BaseQRankSum=-9.294;DP=452;FS=2.028;HRun=0;HaplotypeScore=67.4731;InbreedingCoeff=0.9608;MQ=53.60;MQ0=13;MQRankSum=1.078;QD=48.96;ReadPosRankSum=1.430;VQSLOD=4.2566;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:18:36.10:0,36,639	0/0:4,0:4:12.04:0,12,224	0/0:3,0:2:6.02:0,6,102	./.	0/0:32,0:31:75.09:0,75,1333	1/1:0,12:11:24.08:640,24,0	1/1:6,7:10:15.05:399,15,0	0/0:26,0:26:63.20:0,63,1133	1/1:0,8:6:18.06:480,18,0	0/0:17,0:16:48.16:0,48,869	0/0:17,0:17:30.10:0,30,550	1/1:0,7:8:18.06:479,18,0	0/0:18,0:18:42.14:0,42,784	0/0:6,0:5:15.05:0,15,280	0/0:18,0:18:51.17:0,51,952	0/0:9,0:9:27.09:0,27,504	0/0:48,0:46:96.33:0,96,1774	0/0:24,0:24:56.85:0,57,1024	0/0:16,0:13:36.12:0,36,672	0/0:22,0:22:54.14:0,54,972	0/0:9,0:9:21.07:0,21,392	0/0:13,0:13:30.10:0,30,560	1/1:4,10:12:30.10:790,30,0	1/1:1,12:12:24.08:639,24,0	0/0:25,0:25:57.20:0,57,1046	0/0:18,0:18:54.19:0,54,1008	0/0:18,0:18:51.17:0,51,935	0/0:14,0:14:39.13:0,39,728
chr10	39937749	.	TTCC	T	7945.87	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=8.244;DP=685;FS=7.051;HRun=0;HaplotypeScore=107.7407;InbreedingCoeff=0.9944;MQ=84.97;MQ0=0;MQRankSum=-5.056;QD=44.14;ReadPosRankSum=1.054;VQSLOD=6.6641;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:78.27:0,78,1798	0/0:8,0:8:24.08:0,24,567	0/0:26,0:26:71.81:0,72,1640	0/0:22,0:22:63.21:0,63,1345	0/0:33,0:33:96.31:0,96,2143	0/0:31,0:31:93.30:0,93,2108	0/0:23,0:23:69.24:0,69,1592	1/1:1,29:30:87.26:1423,87,0	0/0:27,0:27:78.27:0,78,1799	0/0:32,0:32:96.33:0,96,2270	0/0:25,0:25:69.24:0,69,1611	0/0:33,0:33:99:0,99,2215	0/0:30,0:30:87.30:0,87,2039	0/0:28,0:28:84.29:0,84,1945	0/0:34,0:34:99:0,102,2411	0/0:32,0:32:96.33:0,96,2232	0/0:14,0:14:42.14:0,42,988	0/0:13,0:13:39.13:0,39,908	1/1:0,18:18:54.18:934,54,0	1/1:0,24:24:60.16:1025,60,0	1/1:0,31:31:57.19:970,57,0	0/0:22,0:22:63.22:0,63,1432	0/0:28,0:28:81.28:0,81,1834	0/0:17,0:17:51.18:0,51,1205	1/1:0,10:10:30.10:529,30,0	1/1:1,27:28:81.28:1424,81,0	1/1:1,32:33:81.28:1429,81,0	1/1:1,5:6:12.04:212,12,0
chr10	39938306	.	T	TC	2875.24	PASS	AB=0.814;AC=18;AF=0.321;AN=56;BaseQRankSum=11.987;DP=488;FS=80.838;HRun=2;HaplotypeScore=218.4081;InbreedingCoeff=-0.4751;MQ=65.81;MQ0=0;MQRankSum=-8.768;QD=7.90;ReadPosRankSum=6.846;VQSLOD=-0.5593;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:22,2:24:55.98:56,0,92	0/1:7,2:9:56.80:79,0,57	0/0:11,0:11:32.85:0,33,340	0/0:11,0:10:26.31:0,26,242	0/1:23,7:30:88.42:254,0,88	0/1:15,4:19:99:104,0,115	0/0:13,0:13:25.23:0,25,165	0/0:26,1:27:24.25:0,24,580	0/1:13,1:14:17.40:17,0,66	0/1:15,7:22:99:268,0,271	0/1:20,10:30:67.47:270,0,67	0/1:13,4:17:91.94:149,0,92	0/1:12,5:17:99:175,0,108	0/0:12,0:12:23.17:0,23,102	0/1:15,5:20:99:179,0,102	0/1:18,5:23:99:172,0,147	0/0:13,0:13:28.65:0,29,156	0/0:6,0:6:16.46:0,16,100	0/0:10,0:10:26.39:0,26,217	0/1:18,6:24:99:208,0,99	0/0:14,0:14:27.50:0,28,166	0/1:15,4:19:99:122,0,155	0/1:18,4:22:99:100,0,114	0/1:9,1:10:20.58:21,0,34	0/1:13,5:18:50.68:187,0,51	0/1:13,8:21:99:323,0,137	0/1:16,9:25:80.23:353,0,80	0/0:7,0:7:16.23:0,16,101
chr10	39939063	.	C	CT	2530.86	PASS	AB=0.747;AC=47;AF=0.839;AN=56;BaseQRankSum=-3.548;DP=261;FS=11.986;HRun=0;HaplotypeScore=42.7278;InbreedingCoeff=0.1662;MQ=79.06;MQ0=3;MQRankSum=-0.977;QD=11.61;ReadPosRankSum=1.092;VQSLOD=3.1084;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:9,0:9:4.66:102,0,5	1/1:2,0:2:0.89:2,1,0	0/0:28,0:16:29.06:0,29,247	0/0:15,0:10:3.44:0,3,126	1/1:4,0:4:5.99:49,6,0	1/1:1,0:1:3.01:33,3,0	1/1:13,1:14:20.77:153,21,0	1/1:3,10:13:28.99:239,29,0	1/1:8,0:8:13.88:153,14,0	1/1:4,0:4:3.06:53,3,0	1/1:1,2:3:3.01:33,3,0	1/1:15,0:15:8.05:218,8,0	1/1:3,0:3:8.98:71,9,0	1/1:2,0:2:5.95:44,6,0	1/1:9,1:9:23.60:195,24,0	0/1:2,8:10:12.49:12,0,16	0/1:5,9:14:16.83:17,0,17	1/1:8,0:8:14.11:121,14,0	1/1:2,7:8:9.63:157,10,0	1/1:1,12:13:4.27:59,4,0	1/1:15,1:16:4.76:120,5,0	1/1:11,0:10:11.70:191,12,0	1/1:10,0:10:20.48:138,20,0	0/1:12,0:12:60.56:138,0,61	1/1:0,6:6:8.71:56,9,0	1/1:9,0:9:20.64:152,21,0	1/1:5,3:7:20.60:151,21,0	0/1:1,3:4:14.91:15,0,15
chr10	39939071	.	C	CCCA	631.76	PASS	AB=0.868;AC=18;AF=0.333;AN=54;BaseQRankSum=0.917;DP=268;FS=0.000;HRun=0;HaplotypeScore=58.1758;InbreedingCoeff=0.4353;MQ=82.94;MQ0=4;MQRankSum=0.461;QD=6.65;ReadPosRankSum=2.390;VQSLOD=1.9032;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:7,0:7:3.54:4,0,19	0/0:2,0:2:2.96:0,3,19	0/0:34,0:21:39.28:0,39,302	0/0:18,0:12:16.96:0,17,128	0/0:4,0:4:5.99:0,6,50	1/1:1,0:1:2.37:8,2,0	0/0:17,0:17:12.40:0,12,114	1/1:11,0:11:0.42:77,0,0	0/0:6,0:6:12:0,12,72	0/0:4,0:4:7.80:0,8,54	1/1:4,0:4:1.90:7,2,0	0/0:11,0:11:7.03:0,7,117	./.	0/0:1,0:1:2.96:0,3,19	0/0:10,0:9:11.92:0,12,98	0/0:9,0:9:5.61:0,6,23	0/0:18,0:18:12.19:0,12,121	0/0:7,0:7:16.90:0,17,105	0/1:9,1:9:14.93:119,0,15	1/1:11,1:13:7.19:55,7,0	1/1:20,0:21:10.59:189,11,0	0/0:12,0:11:11.28:0,11,113	0/0:10,0:10:22.23:0,22,179	0/0:10,0:10:21.64:0,22,178	1/1:4,2:6:8.94:98,9,0	0/1:10,0:10:29.92:89,0,30	0/1:2,2:8:1.47:115,0,1	1/1:3,0:3:5.02:28,5,0
chr10	39939663	.	C	CTTTTCTTTTTTT	23873.74	PASS	AB=0.881;AC=49;AF=0.875;AN=56;BaseQRankSum=-0.700;DP=522;FS=0.693;HRun=0;HaplotypeScore=180.2718;InbreedingCoeff=0.4663;MQ=60.45;MQ0=1;MQRankSum=-4.871;QD=49.95;ReadPosRankSum=1.692;VQSLOD=4.3349;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:8,0:18:3.82:487,0,4	1/1:3,0:8:18.01:609,18,0	0/0:20,0:16:21.61:0,22,665	0/0:24,0:17:15.86:0,16,297	1/1:17,0:29:21.21:1114,21,0	1/1:5,0:21:6.01:335,6,0	1/1:10,0:10:27.04:677,27,0	1/1:34,0:33:73.98:1908,74,0	1/1:17,0:17:34.26:1121,34,0	1/1:29,0:29:44.06:1359,44,0	1/1:14,0:14:9.31:740,9,0	1/1:23,0:23:63.04:1449,63,0	0/1:19,0:19:11.99:740,0,12	1/1:12,0:14:22.64:641,23,0	1/1:14,0:14:11.27:761,11,0	1/1:18,0:16:41.45:1442,41,0	0/1:12,0:11:13.64:595,0,14	1/1:11,0:11:27:684,27,0	1/1:7,6:22:59.16:1640,59,0	1/1:6,7:30:33.60:1069,34,0	1/1:3,0:3:5.98:59,6,0	1/1:10,0:10:18.01:406,18,0	1/1:24,0:22:63.17:2060,63,0	1/1:7,0:6:17.98:306,18,0	1/1:7,6:27:24.08:872,24,0	1/1:4,9:25:48.63:1739,49,0	1/1:4,6:25:20.04:553,20,0	1/1:0,3:13:9.03:509,9,0
chr10	39939962	.	TTAAA	T	6778.66	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=5.137;DP=535;FS=4.484;HRun=0;HaplotypeScore=92.5449;InbreedingCoeff=0.6557;MQ=71.88;MQ0=1;MQRankSum=-2.410;QD=26.90;ReadPosRankSum=3.872;VQSLOD=4.2323;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:75.12:0,75,1610	0/0:10,0:10:30.07:0,30,691	0/0:26,0:16:38.30:0,38,638	0/0:21,0:16:15.32:0,15,294	0/0:23,0:23:60.05:0,60,1159	0/1:9,0:28:2.54:3,0,363	0/0:2,0:15:12.03:0,12,135	1/1:0,26:28:78.07:1201,78,0	0/1:5,0:15:56.76:57,0,132	0/0:19,0:19:56.58:0,57,1015	0/0:18,0:18:54.01:0,54,907	0/1:2,0:15:6.65:7,0,153	0/0:18,0:18:48.12:0,48,931	0/0:13,0:13:39.08:0,39,773	0/0:21,0:21:63.19:0,63,1445	0/0:34,0:34:99:0,99,2227	0/0:14,0:14:36.07:0,36,756	0/0:9,0:9:26.70:0,27,459	1/1:0,22:24:72.12:1155,72,0	1/1:0,26:27:65.72:1067,66,0	1/1:0,12:14:21.01:326,21,0	0/0:14,0:14:42.13:0,42,997	0/1:7,0:18:51.94:52,0,221	0/1:4,0:17:5.50:6,0,201	1/1:0,16:17:44.89:809,45,0	1/1:0,28:28:81.11:1471,81,0	1/1:0,13:13:23.98:443,24,0	1/1:0,6:7:9.50:182,10,0
chr10	39939963	.	T	TA	469.50	PASS	AB=0.923;AC=17;AF=0.304;AN=56;BaseQRankSum=0.373;DP=553;FS=1.221;HRun=15;HaplotypeScore=106.3686;InbreedingCoeff=0.4438;MQ=71.03;MQ0=2;MQRankSum=-1.043;QD=2.11;ReadPosRankSum=-2.780;VQSLOD=-0.2722;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,5:28:27.51:0,28,273	0/0:10,0:10:20.38:0,20,123	0/0:28,1:18:22.89:0,23,134	0/1:22,0:16:14.18:14,0,26	0/0:22,0:25:0.03:0,0,102	1/1:29,0:30:14.15:109,14,0	1/1:14,0:14:0.02:31,0,0	0/0:28,0:28:37.62:0,38,113	1/1:17,0:17:14.04:78,14,0	0/0:16,1:20:6.71:0,7,117	0/0:14,0:18:21.89:0,22,121	1/1:20,0:20:23.13:133,23,0	0/0:17,4:21:0.99:0,1,112	0/1:12,1:14:14.49:14,0,31	0/1:20,0:20:4.17:4,0,182	0/1:28,3:33:11.52:12,0,261	0/1:11,4:15:24.66:25,0,86	0/0:8,0:8:11.59:0,12,65	0/0:24,0:24:32.98:0,33,101	0/0:27,0:27:34.02:0,34,104	0/0:14,0:14:12.22:0,12,38	0/0:14,0:14:21.53:0,22,127	1/1:18,0:17:14.42:84,14,0	1/1:19,0:19:20.60:143,21,0	0/0:17,0:16:26.44:0,26,83	0/0:28,0:28:46.58:0,47,144	0/0:13,0:13:14.79:0,15,45	0/0:7,0:7:6.58:0,7,19
chr10	39942892	.	GC	G	6713.28	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-7.944;DP=790;FS=2.747;HRun=1;HaplotypeScore=110.8173;InbreedingCoeff=1.0000;MQ=86.40;MQ0=0;MQRankSum=-1.734;QD=38.81;ReadPosRankSum=3.300;VQSLOD=4.8988;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,160,2512	0/0:14,0:14:42.14:0,42,668	0/0:24,0:24:72.15:0,72,1103	0/0:28,0:28:81.23:0,81,1215	0/0:23,0:23:69.22:0,69,1079	1/1:0,35:35:99:1385,99,0	1/1:0,29:29:81.27:1133,81,0	0/0:29,0:29:87.28:0,87,1348	1/1:0,29:29:81.27:1133,81,0	0/0:35,0:35:99:0,105,1677	0/0:21,0:21:60.19:0,60,919	1/1:0,32:32:87.29:1217,87,0	0/0:27,0:27:81.25:0,81,1270	0/0:22,0:22:66.18:0,66,1002	0/0:30,0:30:87.28:0,87,1355	0/0:42,0:42:99:0,126,1984	0/0:33,0:33:99:0,99,1577	0/0:16,0:16:47.83:0,48,730	0/0:17,0:17:48.16:0,48,766	0/0:29,0:29:87.28:0,87,1362	0/0:31,0:31:84.29:0,84,1338	0/0:33,0:33:93.32:0,93,1479	1/1:0,21:21:53.89:755,54,0	1/1:0,27:27:78.26:1091,78,0	0/0:25,0:25:75.24:0,75,1174	0/0:30,0:30:87.30:0,87,1383	0/0:37,0:37:99:0,111,1774	0/0:18,0:18:54.18:0,54,860
chr10	39944224	.	G	GCATGACCCCTTTT	42556.72	PASS	AB=0.625;AC=27;AF=0.482;AN=56;BaseQRankSum=-9.706;DP=718;FS=0.950;HRun=0;HaplotypeScore=217.2562;InbreedingCoeff=0.9130;MQ=75.40;MQ0=0;MQRankSum=-18.089;QD=122.64;ReadPosRankSum=1.512;VQSLOD=4.8089;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,105,3639	0/0:10,0:10:27.09:0,27,1062	0/0:34,0:34:95.79:0,96,2999	0/0:26,0:26:65.54:0,66,2025	0/0:25,0:25:66.20:0,66,2337	1/1:7,13:25:60.21:3466,60,0	1/1:10,11:28:60.21:3816,60,0	1/1:13,2:35:93.27:4093,93,0	1/1:10,9:22:48.16:2929,48,0	0/0:30,0:30:90.29:0,90,3280	0/0:14,0:14:39.10:0,39,1199	1/1:11,13:30:57.20:3697,57,0	0/0:30,0:30:87.28:0,87,3375	0/0:25,0:25:72.20:0,72,2543	0/0:34,0:34:99:0,99,3634	0/0:34,0:34:99:0,99,3618	0/0:34,0:34:99:0,99,3433	0/0:16,0:16:48.09:0,48,1661	1/1:8,4:22:57.18:2596,57,0	1/1:8,18:33:84.21:4788,84,0	1/1:7,3:21:21.07:1267,21,0	0/0:23,0:23:63.20:0,63,2009	1/1:4,5:15:24.08:1382,24,0	1/1:7,8:19:26.99:1764,27,0	1/1:7,13:27:57.20:3369,57,0	0/1:10,7:25:46.77:3187,0,47	1/1:5,23:40:90.31:5807,90,0	1/1:0,2:4:6.02:397,6,0
chr10	39948007	.	G	GT	1548.43	PASS	AB=0.973;AC=7;AF=0.125;AN=56;BaseQRankSum=-0.522;DP=743;FS=0.000;HRun=7;HaplotypeScore=121.6871;InbreedingCoeff=0.8275;MQ=76.05;MQ0=6;MQRankSum=0.123;QD=10.53;ReadPosRankSum=0.886;VQSLOD=1.6980;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,21:25:50.35:549,50,0	0/0:10,0:10:24.02:0,24,227	0/1:68,1:41:17.05:17,0,398	0/0:63,0:29:10.95:0,11,314	0/0:33,0:33:84.23:0,84,781	0/0:26,0:26:49.36:0,49,291	0/0:14,0:14:32.27:0,32,203	0/0:25,0:25:58.23:0,58,330	0/0:24,0:24:65.77:0,66,375	0/0:29,0:30:80.60:0,81,726	0/0:25,0:25:55.05:0,55,545	0/0:20,0:20:35.62:0,36,223	1/1:2,22:24:51.14:571,51,0	1/1:4,22:26:50.09:561,50,0	0/0:33,0:33:81.09:0,81,770	0/0:32,0:31:87.12:0,87,835	0/0:16,0:16:39.06:0,39,375	0/0:19,0:19:51.02:0,51,473	0/0:31,0:32:71.94:0,72,401	0/0:29,0:29:64.18:0,64,474	0/0:13,0:13:23.46:0,23,125	0/0:13,0:13:38.99:0,39,360	0/0:22,0:22:53.98:0,54,325	0/0:21,0:21:42.22:0,42,238	0/0:20,0:20:47.03:0,47,306	0/0:24,0:24:56.41:0,56,294	0/0:35,0:35:94.23:0,94,621	0/0:17,0:17:40.66:0,41,282
chr10	39948018	.	G	GT	2647.78	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-1.170;DP=734;FS=4.446;HRun=0;HaplotypeScore=125.5404;InbreedingCoeff=0.9928;MQ=76.87;MQ0=6;MQRankSum=-0.286;QD=22.25;ReadPosRankSum=4.183;VQSLOD=4.7178;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:59.50:0,60,330	0/0:8,0:8:24.08:0,24,331	0/0:83,0:47:99:0,100,1114	0/0:68,0:31:55.09:0,55,663	0/0:34,0:34:97.02:0,97,1268	1/1:3,20:23:31.40:513,31,0	1/1:1,12:13:33.10:380,33,0	0/0:28,0:28:73.08:0,73,425	1/1:4,21:25:37.96:610,38,0	0/0:29,0:29:81.26:0,81,1110	0/0:27,0:27:77.97:0,78,1003	1/1:2,14:16:12.89:368,13,0	0/0:22,0:22:49.87:0,50,264	0/0:25,0:25:60.71:0,61,336	0/0:26,0:26:78.26:0,78,1085	0/0:32,0:31:96.32:0,96,1328	0/0:15,0:15:45.14:0,45,601	0/0:15,0:15:45.15:0,45,626	0/0:34,0:33:79.89:0,80,445	0/0:29,0:29:75.14:0,75,413	0/0:14,0:14:31.78:0,32,182	0/0:14,0:14:42.13:0,42,569	1/1:5,18:23:19.05:481,19,0	1/1:1,18:19:42.12:481,42,0	0/0:17,0:17:44.61:0,45,293	0/0:19,0:19:39.93:0,40,246	0/0:34,0:34:95.10:0,95,528	0/0:17,0:17:48.54:0,49,271
chr10	39949111	.	C	CGTGT	2422.27	PASS	AB=0.913;AC=38;AF=0.731;AN=52;BaseQRankSum=-0.132;DP=482;FS=0.000;HRun=0;HaplotypeScore=116.5111;InbreedingCoeff=0.4858;MQ=61.15;MQ0=19;MQRankSum=-1.040;QD=6.75;ReadPosRankSum=-1.903;VQSLOD=2.3323;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:27:15.02:0,15,140	1/1:5,0:8:6.02:104,6,0	./.	./.	1/1:18,2:25:3.01:52,3,0	1/1:11,0:15:2.74:12,3,0	1/1:6,0:10:2.62:12,3,0	1/1:23,0:21:2.98:22,3,0	1/1:7,0:13:5.49:25,5,0	1/1:26,0:20:23.55:324,24,0	0/1:13,0:10:0:0,0,0	0/0:6,0:6:12.04:0,12,188	0/0:6,0:12:12:0,12,106	0/1:10,0:14:19.89:20,0,47	0/1:15,0:15:0:0,0,0	1/1:23,0:22:3.01:53,3,0	1/1:12,0:11:9.01:130,9,0	1/1:11,0:13:6.02:104,6,0	1/1:21,1:22:17.69:240,18,0	1/1:10,4:16:6.02:142,6,0	0/1:8,6:17:5.88:71,0,6	1/1:15,0:13:3.01:44,3,0	0/0:6,0:7:12.03:0,12,165	0/0:18,0:18:21.54:0,22,294	1/1:7,8:17:23.29:391,23,0	1/1:19,7:31:31.84:467,32,0	1/1:13,7:19:9.03:213,9,0	1/1:4,1:5:8.70:152,9,0
chr10	39949280	.	G	GA	2925.57	PASS	AB=0.754;AC=43;AF=0.768;AN=56;BaseQRankSum=2.617;DP=482;FS=6.647;HRun=14;HaplotypeScore=86.9905;InbreedingCoeff=0.3930;MQ=51.63;MQ0=5;MQRankSum=-1.883;QD=6.77;ReadPosRankSum=-3.963;VQSLOD=1.6988;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:27,1:35:7.48:7,0,227	1/1:4,3:7:6:53,6,0	0/0:10,0:4:11.49:0,11,61	0/0:9,0:5:3.13:0,3,12	0/1:20,2:23:27.96:194,0,28	1/1:4,2:15:14.36:83,14,0	1/1:1,1:9:12.41:71,12,0	1/1:17,0:24:43.95:227,44,0	1/1:3,2:8:14.65:101,15,0	1/1:11,11:23:9.37:192,9,0	1/1:1,19:19:12:106,12,0	1/1:7,0:8:7.34:30,7,0	0/0:16,1:18:12.06:0,12,143	0/0:11,0:12:22.57:0,23,139	0/1:8,12:20:8.57:139,0,9	0/1:3,7:10:23.50:64,0,24	1/1:8,21:29:52.16:464,52,0	0/1:13,7:21:7.37:209,0,7	1/1:9,1:16:24.46:114,24,0	1/1:21,0:25:36.72:188,37,0	1/1:7,0:9:9.53:50,10,0	1/1:3,12:16:24.94:184,25,0	1/1:5,0:14:4.80:42,5,0	1/1:5,0:15:22.79:115,23,0	1/1:12,0:21:9.60:118,10,0	1/1:26,0:25:35.12:186,35,0	1/1:24,1:26:21.40:112,21,0	1/1:1,0:9:8.52:43,9,0
chr10	39950128	.	CG	C	5566.44	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=12.960;DP=816;FS=1.050;HRun=3;HaplotypeScore=76.2613;InbreedingCoeff=0.9999;MQ=81.34;MQ0=0;MQRankSum=-6.180;QD=33.53;ReadPosRankSum=2.996;VQSLOD=5.4357;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,141,2011	0/0:12,0:12:36.12:0,36,518	0/0:27,0:27:75.25:0,75,1076	0/0:16,0:16:48.16:0,48,676	0/0:32,0:32:84.27:0,84,1189	1/1:1,25:26:69.22:855,69,0	1/1:0,24:24:63.20:781,63,0	0/0:29,0:29:81.25:0,81,1129	1/1:2,20:22:60.19:742,60,0	0/0:35,0:35:99:0,102,1404	0/0:26,0:26:78.25:0,78,1099	1/1:0,40:40:99:1376,111,0	0/0:33,0:33:96.28:0,96,1324	0/0:37,0:37:99:0,102,1446	0/0:36,0:36:99:0,102,1450	0/0:34,0:34:99:0,99,1406	0/0:35,0:34:99:0,105,1511	0/0:23,0:23:69.23:0,69,993	0/0:11,0:11:33.11:0,33,475	0/0:25,0:25:72.23:0,72,1015	0/0:49,0:49:99:0,141,1976	0/0:36,0:36:99:0,108,1482	1/1:1,19:20:54.17:660,54,0	1/1:3,31:34:93.29:1153,93,0	0/0:24,0:24:72.22:0,72,1001	0/0:39,0:39:99:0,111,1515	0/0:29,0:29:87.29:0,87,1249	0/0:15,0:15:45.08:0,45,567
chr10	39950752	.	G	GGAT	19407.27	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-14.526;DP=597;FS=2.863;HRun=0;HaplotypeScore=74.8797;InbreedingCoeff=0.9467;MQ=79.60;MQ0=0;MQRankSum=-6.661;QD=62.40;ReadPosRankSum=-0.242;VQSLOD=6.0846;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:93.30:0,93,1685	0/0:6,0:6:18.06:0,18,335	0/0:14,0:14:42.11:0,42,688	0/0:18,0:18:54.04:0,54,815	0/0:13,0:13:36.12:0,36,670	1/1:2,15:18:48.16:1167,48,0	1/1:0,28:29:78.27:1914,78,0	1/1:1,37:41:99:2548,117,0	1/1:0,14:16:33.11:808,33,0	0/0:18,0:18:54.19:0,54,995	0/0:17,0:17:48.15:0,48,862	1/1:0,21:21:63.22:1542,63,0	0/0:24,0:24:72.25:0,72,1335	0/0:16,0:16:48.16:0,48,892	0/0:23,0:23:69.24:0,69,1272	0/0:24,1:25:1.31:0,1,1230	0/0:32,0:32:96.33:0,96,1761	0/0:23,0:23:69.19:0,69,1249	1/1:1,15:17:48.11:1125,48,0	1/1:1,25:26:66.23:1615,66,0	1/1:0,29:30:71.89:1747,72,0	0/0:25,0:25:75.22:0,75,1303	1/1:0,16:16:45.15:1101,45,0	1/1:0,20:21:42.14:1035,42,0	1/1:1,13:14:36.12:865,36,0	1/1:1,19:21:4.24:1291,4,0	1/1:0,32:34:93.32:2280,93,0	1/1:1,6:7:15.05:369,15,0
chr10	39951149	.	TGCATGAGAGTTGG	T	12900.45	PASS	AB=0.519;AC=15;AF=0.268;AN=56;BaseQRankSum=16.351;DP=691;FS=6.579;HRun=0;HaplotypeScore=255.9388;InbreedingCoeff=0.8875;MQ=81.98;MQ0=0;MQRankSum=-13.656;QD=82.70;ReadPosRankSum=2.047;VQSLOD=3.9844;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:81.26:0,81,4965	0/0:12,0:12:30.08:0,30,1774	0/0:29,0:28:75.24:0,75,4107	0/0:27,0:27:77.48:0,77,3645	0/0:31,0:31:84.27:0,84,5284	0/0:32,0:32:90.31:0,90,5469	0/0:20,0:20:57.20:0,57,3621	1/1:10,22:32:66.23:2272,66,0	0/0:40,0:40:99:0,108,6542	0/0:45,0:45:99:0,123,7644	0/0:26,0:26:72.25:0,72,4467	0/0:23,0:23:69.24:0,69,4523	0/0:20,0:20:60.21:0,60,3662	0/0:30,0:30:87.30:0,87,4875	0/0:36,0:36:99:0,108,6620	0/0:25,0:25:72.25:0,72,4328	0/0:28,0:28:81.28:0,81,4791	0/0:14,0:14:42.14:0,42,2430	1/1:2,11:13:33.10:1145,33,0	1/1:1,22:23:66.23:2466,66,0	1/1:3,4:7:9.03:356,9,0	0/0:19,0:19:57.20:0,57,3605	0/0:28,0:28:84.29:0,84,5179	0/0:22,0:22:60.21:0,60,3804	1/1:2,15:17:33.11:1307,33,0	0/1:2,26:28:99:2699,0,116	1/1:3,28:31:60.21:2298,60,0	1/1:2,3:5:9.03:357,9,0
chr10	39952103	.	GCCC	G	5699.56	PASS	AB=0.574;AC=28;AF=0.500;AN=56;BaseQRankSum=-12.293;DP=495;FS=14.498;HRun=12;HaplotypeScore=91.8563;InbreedingCoeff=0.6989;MQ=78.44;MQ0=7;MQRankSum=-3.683;QD=20.95;ReadPosRankSum=2.636;VQSLOD=2.0675;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,12:14:27.06:341,27,0	1/1:4,9:13:21.03:265,21,0	0/0:39,0:15:34.39:0,34,469	0/0:30,0:21:20.19:0,20,257	1/1:3,24:28:63.05:728,63,0	0/0:6,0:23:10.86:0,11,220	0/0:3,0:11:15.04:0,15,61	0/0:13,0:22:11.82:0,12,76	0/1:4,0:21:15.83:16,0,35	1/1:5,15:20:45.11:561,45,0	1/1:3,14:18:37.72:483,38,0	0/0:13,0:13:30.04:0,30,359	1/1:1,23:24:57.16:720,57,0	1/1:0,14:14:42.13:527,42,0	1/1:0,13:13:39.12:493,39,0	1/1:1,12:13:33.08:417,33,0	1/1:1,17:19:39.02:492,39,0	1/1:1,4:5:12.03:151,12,0	0/1:5,0:14:3.79:4,0,23	0/1:7,0:21:9.38:9,0,51	0/0:6,0:13:16.18:0,16,53	1/1:3,11:14:33.07:416,33,0	0/0:6,0:6:16.30:0,16,211	0/0:11,0:11:33.11:0,33,474	0/0:1,0:18:17.44:0,17,37	0/1:3,2:20:22.80:74,0,23	0/0:3,0:26:23.45:0,23,68	0/0:1,0:6:1.25:0,1,3
chr10	39953100	.	TAAA	T	2098.07	PASS	AB=0.579;AC=15;AF=0.268;AN=56;BaseQRankSum=1.499;DP=419;FS=1.032;HRun=16;HaplotypeScore=67.6646;InbreedingCoeff=0.8327;MQ=60.25;MQ0=5;MQRankSum=-1.600;QD=15.66;ReadPosRankSum=3.241;VQSLOD=2.3100;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:15:36.59:0,37,615	0/0:4,0:7:12.04:0,12,172	0/0:11,0:8:9.92:0,10,89	0/0:9,0:5:0.26:0,0,41	0/0:17,0:19:40.47:0,40,575	0/0:5,0:15:31.20:0,31,311	0/0:6,0:14:32.86:0,33,251	1/1:14,10:21:13.32:290,13,0	0/0:9,0:15:28.16:0,28,255	0/0:8,0:17:36.12:0,36,572	0/0:4,0:19:42.14:0,42,625	0/0:2,0:9:23.71:0,24,211	0/0:12,0:13:34.32:0,34,485	0/0:9,0:9:23.97:0,24,347	0/0:17,0:18:39.13:0,39,653	0/0:11,0:11:30.10:0,30,511	0/0:21,0:25:45.11:0,45,693	0/0:14,0:23:30.06:0,30,392	1/1:3,6:10:19.52:223,20,0	1/1:4,16:19:29.76:316,30,0	1/1:6,9:16:19.46:223,19,0	0/0:4,0:6:15.04:0,15,209	0/0:13,0:13:26.93:0,27,272	0/0:2,0:13:23.91:0,24,182	1/1:2,6:10:20.83:197,21,0	0/1:5,16:22:55.94:432,0,56	1/1:4,20:25:46.24:513,46,0	1/1:0,5:5:8.98:97,9,0
chr10	39953790	.	CT	C	1094.42	PASS	AB=0.818;AC=7;AF=0.125;AN=56;BaseQRankSum=8.554;DP=487;FS=1.753;HRun=10;HaplotypeScore=49.7097;InbreedingCoeff=0.7802;MQ=69.97;MQ0=1;MQRankSum=-2.510;QD=16.84;ReadPosRankSum=1.524;VQSLOD=4.1154;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,19:24:34.87:470,35,0	0/0:9,0:9:24.06:0,24,266	0/1:6,2:8:44.21:44,0,56	0/0:15,1:14:14.33:0,14,212	0/0:16,0:16:39.11:0,39,430	0/0:19,0:19:54.12:0,54,581	0/0:14,0:14:36.10:0,36,398	0/0:29,1:30:52.15:0,52,796	0/0:15,0:15:39.10:0,39,423	0/0:27,0:27:57.15:0,57,625	0/0:20,0:20:42.07:0,42,449	0/0:20,0:20:54.13:0,54,586	1/1:1,16:17:41.99:364,42,0	1/1:0,15:15:41.99:365,42,0	0/0:13,0:13:33.08:0,33,358	0/0:12,0:12:33.08:0,33,356	0/0:17,0:17:45.12:0,45,498	0/0:15,0:15:20.14:0,20,348	0/0:19,0:19:39.11:0,39,431	0/0:18,1:21:30.86:0,31,525	0/0:21,0:21:60.11:0,60,634	0/0:4,0:4:3.01:0,3,33	0/0:12,0:12:24.03:0,24,253	0/0:16,0:16:42.11:0,42,464	0/0:16,1:17:16.17:0,16,406	0/0:29,0:30:82.56:0,83,859	0/0:26,0:26:41.16:0,41,641	0/0:12,0:12:29.92:0,30,293
chr10	39955004	.	TCACA	T	1388.73	PASS	AB=0.952;AC=13;AF=0.232;AN=56;BaseQRankSum=5.494;DP=597;FS=0.000;HRun=0;HaplotypeScore=138.4386;InbreedingCoeff=0.6067;MQ=71.56;MQ0=5;MQRankSum=-5.681;QD=9.26;ReadPosRankSum=1.769;VQSLOD=2.7230;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:42.10:0,42,839	1/1:8,0:8:9.01:84,9,0	0/0:34,0:27:6.01:0,6,92	0/0:31,0:24:9.03:0,9,196	0/0:23,0:23:33.11:0,33,632	0/0:17,0:17:12.03:0,12,195	0/0:23,0:23:15.03:0,15,230	0/0:21,0:21:7.84:0,8,131	0/0:17,0:22:3.01:0,3,52	1/1:23,0:23:45.05:418,45,0	1/1:18,0:18:27.03:251,27,0	0/0:16,0:23:9.03:0,9,173	1/1:11,8:18:24.40:381,24,0	1/1:12,8:21:24.07:342,24,0	0/0:15,0:15:21.04:0,21,309	0/0:19,0:19:15.94:0,16,262	0/0:16,0:15:12.01:0,12,216	0/1:11,0:11:51.28:69,0,51	0/0:14,0:14:6.02:0,6,122	0/1:23,0:23:15.91:16,0,129	0/0:34,0:34:25.07:0,25,884	0/0:24,0:24:32.32:0,32,545	0/0:22,0:22:18.04:0,18,287	0/0:15,0:22:9:0,9,100	0/1:23,1:26:1.60:2,0,789	0/0:23,0:24:34.62:0,35,583	0/0:16,0:18:25.89:0,26,450	0/0:14,0:13:28.31:0,28,521
chr10	39955029	.	CA	C	132.80	PASS	AB=0.685;AC=4;AF=0.071;AN=56;BaseQRankSum=9.025;DP=665;FS=2.189;HRun=1;HaplotypeScore=137.3849;InbreedingCoeff=-0.0691;MQ=57.43;MQ0=8;MQRankSum=-6.073;QD=2.04;ReadPosRankSum=3.510;VQSLOD=-0.3726;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:69.22:0,69,972	0/1:3,3:6:26.32:27,0,26	0/0:29,0:15:42.12:0,42,519	0/0:36,0:21:28.94:0,29,669	0/0:28,0:28:25.18:0,25,586	0/0:25,0:25:42.13:0,42,526	0/0:19,0:17:20.85:0,21,252	0/0:29,0:29:74.05:0,74,930	0/0:19,0:19:15.04:0,15,180	0/1:10,13:24:99:139,0,203	0/1:8,9:21:66.15:66,0,184	0/0:26,0:25:30.07:0,30,354	0/0:28,0:27:58.25:0,58,661	0/0:21,0:21:37.68:0,38,428	0/0:23,0:23:24.96:0,25,315	0/0:22,0:22:31.65:0,32,391	0/0:18,0:17:15.05:0,15,207	0/1:11,2:14:1.52:2,0,346	0/0:12,0:12:36.10:0,36,462	0/0:16,0:15:30.10:0,30,399	0/0:43,0:43:99:0,108,1433	0/0:29,0:29:58.09:0,58,628	0/0:20,0:20:30.08:0,30,345	0/0:20,0:20:17.07:0,17,177	0/0:36,0:36:88.96:0,89,1170	0/0:25,0:25:74.06:0,74,983	0/0:26,0:26:71.26:0,71,940	0/0:21,0:20:48.16:0,48,688
chr10	39955031	.	CACACACACA	C	1923.09	PASS	AB=0.882;AC=8;AF=0.143;AN=56;BaseQRankSum=7.664;DP=667;FS=0.582;HRun=0;HaplotypeScore=206.3823;InbreedingCoeff=0.2764;MQ=59.87;MQ0=7;MQRankSum=-5.675;QD=17.17;ReadPosRankSum=1.421;VQSLOD=2.5087;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:69.21:0,69,2674	1/1:2,3:5:1.47:196,1,0	0/0:31,0:17:48.14:0,48,786	0/0:36,0:21:60.40:0,60,996	0/1:29,0:29:55.89:56,0,1424	0/0:25,0:25:44.99:0,45,1071	0/0:20,0:18:26.60:0,27,781	0/0:29,0:29:75.85:0,76,1075	0/0:19,0:19:16.93:0,17,351	1/1:9,14:23:3.31:1053,3,0	0/1:13,9:22:45.56:564,0,46	0/0:26,0:25:30.01:0,30,865	0/0:26,0:27:75.22:0,75,1347	0/1:19,0:20:1:1,0,703	0/0:24,0:24:24.97:0,25,847	0/0:22,0:22:27.04:0,27,754	0/0:18,0:17:14.27:0,14,597	0/1:11,2:13:99:176,0,370	0/0:14,0:14:41.93:0,42,770	0/0:16,0:15:24.97:0,25,721	0/0:43,0:43:99:0,111,3171	0/0:31,0:31:56.76:0,57,1458	0/0:20,0:20:30.09:0,30,965	0/0:20,0:20:15.52:0,16,353	0/0:35,0:35:89.14:0,89,2504	0/0:25,0:25:72.11:0,72,2067	0/0:26,0:26:72.16:0,72,2086	0/0:20,0:19:54.02:0,54,1691
chr10	39955040	.	A	ACACC	3718.63	PASS	AB=0.928;AC=19;AF=0.339;AN=56;BaseQRankSum=0.022;DP=689;FS=6.088;HRun=0;HaplotypeScore=184.9974;InbreedingCoeff=0.0170;MQ=65.35;MQ0=6;MQRankSum=0.049;QD=10.42;ReadPosRankSum=-1.399;VQSLOD=2.2139;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:56.06:0,56,640	0/1:5,0:5:14.89:17,0,15	0/0:36,0:22:53.63:0,54,554	0/0:36,0:23:41.17:0,41,490	1/1:2,23:29:37.73:749,38,0	0/1:24,0:24:99:132,0,212	0/1:22,0:20:99:140,0,129	0/1:29,0:29:5.74:6,0,39	0/1:17,0:17:66.31:132,0,66	0/1:28,0:28:63.48:218,0,63	0/1:24,0:24:27.74:158,0,28	0/1:24,0:23:71.19:71,0,148	0/0:25,0:25:64.87:0,65,579	0/0:22,0:22:59.50:0,60,572	0/1:1,23:26:6.33:399,0,6	1/1:3,19:23:21.46:479,21,0	0/1:4,13:19:11.35:177,0,11	0/1:14,0:14:1.56:185,0,2	0/0:19,0:19:3:0,3,47	0/0:15,0:15:6:0,6,53	0/0:46,0:46:39.97:0,40,498	1/1:5,21:30:28.22:563,28,0	0/1:25,0:25:99:267,0,113	0/1:17,0:17:26.53:27,0,42	0/0:34,0:34:33.23:0,33,548	0/0:24,0:24:30.01:0,30,424	0/0:26,0:26:24.02:0,24,335	0/0:21,0:20:14.95:0,15,321
chr10	39957448	.	GA	G	1023.99	PASS	AB=0.789;AC=15;AF=0.268;AN=56;BaseQRankSum=-5.036;DP=481;FS=10.377;HRun=14;HaplotypeScore=69.9138;InbreedingCoeff=0.4163;MQ=78.14;MQ0=3;MQRankSum=-0.780;QD=5.45;ReadPosRankSum=0.553;VQSLOD=1.4974;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:2,2:17:16.26:16,0,84	0/0:3,0:7:11.59:0,12,67	0/1:25,2:17:18.44:18,0,67	0/0:25,0:19:1.63:0,2,99	0/0:8,0:32:57.96:0,58,334	0/0:7,0:25:26.03:0,26,161	0/0:10,0:18:22.94:0,23,137	1/1:8,12:23:17.63:219,18,0	0/0:3,0:10:14.32:0,14,77	0/0:6,0:17:16.78:0,17,123	0/0:5,0:16:27.90:0,28,174	0/0:10,1:15:12.76:0,13,166	0/0:4,0:17:8.59:0,9,48	0/0:7,0:7:12.46:0,12,105	0/0:4,0:11:6.15:0,6,29	0/0:5,0:21:17.16:0,17,90	0/0:4,0:12:6.93:0,7,32	0/0:5,0:13:26.08:0,26,153	0/1:9,8:17:29.20:108,0,29	1/1:9,18:27:38.31:262,38,0	1/1:3,7:10:11.85:82,12,0	0/0:4,0:20:21.77:0,22,146	0/0:14,0:15:22.85:0,23,171	0/0:3,0:11:8.52:0,9,43	1/1:4,6:10:1.34:86,1,0	0/1:13,6:19:10.85:67,0,11	1/1:8,20:28:41.36:287,41,0	0/1:6,3:9:14.38:52,0,14
chr10	39958662	.	A	AT	2697.22	PASS	AC=16;AF=0.296;AN=54;BaseQRankSum=-5.803;DP=431;FS=4.547;HRun=7;HaplotypeScore=44.4953;InbreedingCoeff=0.8665;MQ=43.38;MQ0=52;MQRankSum=0.010;QD=17.29;ReadPosRankSum=-0.767;VQSLOD=2.9668;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:22:45.05:0,45,434	0/0:5,0:4:9.01:0,9,87	0/0:7,0:3:5.94:0,6,44	./.	0/0:30,0:30:48.06:0,48,463	0/0:14,0:13:18.01:0,18,174	0/0:16,0:11:18:0,18,168	1/1:10,18:17:45.10:524,45,0	0/0:24,0:20:35.93:0,36,347	0/0:15,0:15:42.07:0,42,405	0/0:25,0:25:27.02:0,27,261	0/0:8,0:6:12.02:0,12,116	0/0:6,0:6:15.02:0,15,145	0/0:19,0:16:27.03:0,27,261	0/0:10,0:10:21.03:0,21,203	0/0:12,0:11:15.01:0,15,145	0/0:13,0:11:30.03:0,30,284	0/0:6,0:3:6.01:0,6,58	1/1:2,9:8:18.06:217,18,0	1/1:5,23:27:57.10:654,57,0	1/1:1,6:5:6.02:72,6,0	0/0:13,0:13:18.02:0,18,174	0/0:18,0:17:21.03:0,21,202	0/0:5,0:4:9.01:0,9,87	1/1:0,23:23:54.17:652,54,0	1/1:2,17:12:4.13:333,4,0	1/1:3,31:29:30.06:362,30,0	1/1:0,6:5:6.02:72,6,0
chr10	39966091	.	T	TA	8553.41	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-16.892;DP=543;FS=5.590;HRun=1;HaplotypeScore=47.6519;InbreedingCoeff=0.9537;MQ=80.65;MQ0=0;MQRankSum=-2.237;QD=41.72;ReadPosRankSum=-1.661;VQSLOD=4.4194;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:60.17:0,60,763	0/0:8,0:8:24.08:0,24,312	0/0:11,0:11:33.09:0,33,412	0/0:16,0:16:45.08:0,45,548	0/0:26,0:25:69.22:0,69,896	0/0:15,0:15:42.14:0,42,545	0/0:11,0:11:30.10:0,30,389	1/1:0,39:39:99:1753,117,0	0/0:9,0:9:27.09:0,27,349	0/0:29,0:29:87.26:0,87,1105	0/0:36,0:36:99:0,102,1323	0/0:11,0:11:33.11:0,33,428	0/0:15,0:15:45.15:0,45,584	0/0:21,0:21:63.20:0,63,818	0/0:19,0:19:57.19:0,57,740	0/0:12,0:12:36.12:0,36,466	0/0:18,0:18:54.18:0,54,701	0/0:15,0:15:45.15:0,45,584	1/1:1,14:15:42.12:606,42,0	1/1:0,30:30:84.25:1235,84,0	1/1:0,24:24:72.24:1079,72,0	0/0:24,0:24:72.22:0,72,921	0/0:15,0:15:39.13:0,39,506	0/0:6,0:6:15.05:0,15,195	1/1:1,30:31:81.27:1214,81,0	1/1:2,24:26:0.33:1002,0,0	1/1:0,24:23:72.24:1079,72,0	1/1:0,16:16:39.13:585,39,0
chr10	39967008	.	T	TG	1505.62	PASS	AB=1.000;AC=17;AF=0.315;AN=54;BaseQRankSum=9.464;DP=401;FS=0.585;HRun=5;HaplotypeScore=64.6983;InbreedingCoeff=0.7608;MQ=75.24;MQ0=0;MQRankSum=-5.777;QD=19.81;ReadPosRankSum=-2.302;VQSLOD=2.7085;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:35:87.15:0,87,912	0/0:7,0:7:21.05:0,21,225	0/0:13,0:9:27.06:0,27,285	0/0:21,0:18:39.31:0,39,349	0/0:28,0:28:74.96:0,75,772	./.	0/0:9,0:9:1.89:0,2,6	1/1:3,6:8:5.05:46,5,0	0/0:6,0:6:4.93:0,5,12	0/0:23,0:23:50.79:0,51,525	0/0:24,0:24:34.42:0,34,578	0/0:2,0:2:1.20:0,1,2	0/0:20,0:20:60.15:0,60,643	0/0:24,0:24:66.16:0,66,707	0/0:21,0:21:58.94:0,59,609	0/0:17,0:17:45.11:0,45,482	0/0:30,0:30:84.21:0,84,900	0/0:10,0:10:21.05:0,21,225	1/1:2,4:6:18.06:229,18,0	1/1:3,11:14:15.05:184,15,0	1/1:1,6:7:9.03:117,9,0	0/0:28,0:28:75.19:0,75,805	0/1:6,0:6:0.15:15,0,0	0/0:3,0:3:1.25:0,1,3	1/1:0,10:10:30.10:389,30,0	1/1:2,10:12:0.86:357,1,0	1/1:1,8:9:24.08:307,24,0	1/1:1,1:2:3.01:39,3,0
chr10	39967013	.	GT	G	872.69	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=9.015;DP=407;FS=5.284;HRun=1;HaplotypeScore=67.4626;InbreedingCoeff=0.6667;MQ=76.42;MQ0=0;MQRankSum=-5.300;QD=8.73;ReadPosRankSum=-3.523;VQSLOD=-0.2759;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:34:99:0,102,1381	0/0:7,0:7:21.07:0,21,306	0/0:14,0:10:30.05:0,30,423	0/0:21,0:19:45.70:0,46,519	0/0:26,0:26:70.21:0,70,1030	1/1:3,0:3:9:78,9,0	1/1:4,6:10:26.66:328,27,0	0/0:8,0:8:6.78:0,7,34	1/1:0,5:5:12.04:165,12,0	0/0:22,0:22:38.72:0,39,746	0/0:21,0:21:60.06:0,60,844	1/1:0,3:3:6.02:76,6,0	0/0:22,0:22:63.20:0,63,896	0/0:23,0:23:69.21:0,69,983	0/0:21,0:21:62.23:0,62,879	0/0:19,0:19:54.14:0,54,763	0/0:29,0:29:84.28:0,84,1235	0/0:10,0:10:27.06:0,27,371	0/1:6,0:6:16.36:16,0,23	0/1:12,0:12:8.43:8,0,21	1/1:10,0:10:5.41:17,5,0	0/0:27,0:27:78.18:0,78,1126	1/1:0,7:7:14.73:203,15,0	1/1:0,6:6:2.98:42,3,0	1/1:11,0:11:17.12:58,17,0	0/1:14,0:14:29.51:30,0,40	1/1:12,0:11:11.09:41,11,0	1/1:1,0:1:2.37:8,2,0
chr10	39967221	.	CAA	C	947.38	PASS	AB=0.623;AC=16;AF=0.286;AN=56;BaseQRankSum=-2.776;DP=488;FS=3.703;HRun=15;HaplotypeScore=64.2854;InbreedingCoeff=0.7165;MQ=76.37;MQ0=10;MQRankSum=1.943;QD=6.53;ReadPosRankSum=5.968;VQSLOD=-0.2131;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:24:25.70:0,26,166	1/1:2,5:7:2.32:53,2,0	0/0:40,0:14:8.92:0,9,74	0/0:26,0:19:17.32:0,17,108	1/1:12,13:26:30.05:270,30,0	0/0:15,0:15:12.82:0,13,93	0/0:10,0:13:11.94:0,12,94	0/0:30,0:30:41.92:0,42,455	0/0:20,0:20:23.92:0,24,204	1/1:7,5:12:5.79:97,6,0	0/1:7,12:20:0.79:162,0,1	0/0:13,0:14:14.61:0,15,112	0/0:7,0:13:19.01:0,19,121	0/0:16,0:18:34.24:0,34,237	0/1:9,11:20:33.04:64,0,33	1/1:1,9:10:11.99:106,12,0	1/1:3,15:18:14.72:117,15,0	1/1:3,5:9:13.93:143,14,0	0/0:18,0:19:38.52:0,39,398	0/0:15,0:15:35.91:0,36,352	0/0:9,0:9:14.59:0,15,117	1/1:12,8:20:1.11:114,1,0	0/0:7,0:8:15.55:0,16,122	0/0:15,0:16:10.10:0,10,77	0/0:17,0:17:20.91:0,21,208	0/0:24,0:24:37.26:0,37,391	0/0:14,0:12:17.85:0,18,177	0/0:8,0:7:11.97:0,12,123
chr10	39967237	.	G	GAA	3043.42	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-4.138;DP=549;FS=26.422;HRun=15;HaplotypeScore=68.0314;InbreedingCoeff=0.9243;MQ=68.53;MQ0=13;MQRankSum=-0.362;QD=13.06;ReadPosRankSum=-0.841;VQSLOD=0.3800;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:45.06:0,45,497	0/0:8,0:8:14.97:0,15,137	0/0:42,0:13:20.92:0,21,187	0/0:28,0:17:26.42:0,26,251	0/0:33,0:33:56.57:0,57,666	0/0:5,0:18:2.72:0,3,19	1/1:2,0:16:11.90:62,12,0	1/1:5,22:28:58.37:674,58,0	1/1:5,0:19:12.04:47,12,0	0/0:16,0:15:42.06:0,42,428	0/0:24,0:24:42.06:0,42,484	1/1:6,0:15:18.46:108,18,0	0/0:17,0:17:33.03:0,33,331	0/0:18,0:18:46.81:0,47,474	0/0:19,0:19:27.03:0,27,280	0/0:15,0:15:30.07:0,30,314	0/0:21,0:21:29.43:0,29,287	0/0:18,0:17:21.84:0,22,410	1/1:4,19:23:60.93:652,61,0	1/1:3,13:16:33.07:432,33,0	1/1:8,0:8:15:166,15,0	0/0:13,0:12:20.86:0,21,217	1/1:4,0:8:7.53:45,8,0	1/1:7,0:18:14.13:81,14,0	1/1:1,22:24:18.06:274,18,0	1/1:6,17:25:20.50:525,20,0	1/1:8,14:22:11.15:108,11,0	1/1:2,7:8:6.02:92,6,0
chr10	39967663	.	CT	C	2774.87	PASS	AB=0.947;AC=19;AF=0.339;AN=56;BaseQRankSum=-4.401;DP=530;FS=0.416;HRun=10;HaplotypeScore=109.7149;InbreedingCoeff=0.8731;MQ=69.53;MQ0=4;MQRankSum=0.907;QD=16.42;ReadPosRankSum=2.825;VQSLOD=3.5177;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,1:30:10:0,10,326	1/1:2,4:6:12:105,12,0	0/0:32,0:15:26.99:0,27,274	0/0:36,0:18:23.58:0,24,227	1/1:6,24:31:73.98:627,74,0	0/1:17,1:17:4.80:5,0,170	0/0:10,0:10:21.06:0,21,232	0/0:33,0:32:67.38:0,67,707	0/0:16,0:15:24.01:0,24,251	1/1:7,16:22:44.96:388,45,0	1/1:6,15:21:44.96:391,45,0	0/0:16,0:16:24.02:0,24,245	0/0:13,0:13:10.48:0,10,69	0/0:8,0:8:15.03:0,15,157	1/1:3,13:17:41.02:342,41,0	1/1:2,9:11:26.97:230,27,0	1/1:8,19:27:65.92:559,66,0	1/1:1,10:11:30.46:259,30,0	0/0:19,0:19:45.05:0,45,473	0/0:21,1:22:29.99:0,30,517	0/0:9,0:9:12.03:0,12,133	1/1:1,3:4:9:78,9,0	0/0:14,0:13:23.99:0,24,235	0/0:13,0:14:26.86:0,27,266	0/0:13,0:13:33.09:0,33,364	0/0:25,1:26:36.33:0,36,590	0/0:26,2:27:2.03:0,2,462	0/0:18,0:18:45.09:0,45,485
chr10	39967678	.	C	CT	1283.76	PASS	AB=0.989;AC=16;AF=0.286;AN=56;BaseQRankSum=1.589;DP=536;FS=4.196;HRun=10;HaplotypeScore=110.6376;InbreedingCoeff=0.6274;MQ=53.70;MQ0=13;MQRankSum=-0.555;QD=5.71;ReadPosRankSum=-0.705;VQSLOD=1.7371;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:32:29.31:0,29,227	0/0:6,0:6:10.43:0,10,94	0/1:49,0:14:6.99:7,0,63	0/1:54,0:12:6.59:7,0,28	0/0:30,0:30:52.97:0,53,417	1/1:2,15:16:18.05:192,18,0	1/1:4,9:13:21.05:220,21,0	0/0:24,0:24:49.61:0,50,354	1/1:7,8:13:33.06:340,33,0	0/0:20,0:19:42.56:0,43,331	0/0:19,0:19:35.93:0,36,292	1/1:6,9:15:2.02:200,2,0	0/0:10,0:10:10.16:0,10,57	0/1:8,0:7:2.69:3,0,51	0/0:15,0:15:34.56:0,35,271	0/0:14,0:14:17.20:0,17,162	0/0:20,0:20:38.48:0,38,320	0/0:13,0:12:8.64:0,9,196	0/0:19,0:18:47.62:0,48,339	0/0:21,0:21:21.83:0,22,156	0/0:6,0:6:6.58:0,7,54	0/0:7,0:7:5.99:0,6,49	1/1:3,11:13:21.05:224,21,0	1/1:3,13:16:26.90:268,27,0	0/0:11,0:11:29.07:0,29,193	0/1:20,1:21:3.95:4,0,278	0/0:25,0:24:22.39:0,22,187	0/0:16,0:16:25.43:0,25,276
chr10	39967689	.	CTTTTTTT	C	2224.99	PASS	AB=0.928;AC=20;AF=0.357;AN=56;BaseQRankSum=3.566;DP=491;FS=0.000;HRun=11;HaplotypeScore=135.4048;InbreedingCoeff=0.3182;MQ=46.83;MQ0=20;MQRankSum=-1.657;QD=9.39;ReadPosRankSum=2.479;VQSLOD=-0.3571;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:33.11:0,33,1036	0/1:5,0:7:34.27:34,0,83	0/1:46,0:10:8.82:9,0,86	0/0:53,0:8:9.99:0,10,49	0/0:27,0:26:5.21:0,5,554	0/0:15,0:14:14.15:0,14,359	0/1:12,0:12:6.07:6,0,526	0/1:20,0:20:0.19:180,0,0	0/0:15,0:13:10.95:0,11,474	0/0:17,0:17:35.09:0,35,421	0/0:17,0:16:4.85:0,5,304	0/0:11,0:11:21.05:0,21,496	0/0:11,0:10:12.97:0,13,362	0/0:9,0:8:21.06:0,21,483	0/1:13,0:13:56.48:56,0,339	0/1:11,0:11:90.07:90,0,149	0/1:17,0:17:26.16:26,0,426	0/0:11,0:12:4.66:0,5,291	1/1:16,3:19:26.20:362,26,0	1/1:9,4:13:3.15:209,3,0	1/1:5,1:5:6.38:76,6,0	0/0:6,0:6:6.02:0,6,74	0/0:10,0:10:13.92:0,14,352	0/0:21,0:18:41.95:0,42,754	1/1:8,2:11:24.33:241,24,0	1/1:17,5:21:10.74:514,11,0	0/1:14,5:19:9.15:348,0,9	1/1:13,2:14:19.01:254,19,0
chr10	39967693	.	T	TC	2459.27	PASS	AB=0.806;AC=15;AF=0.268;AN=56;BaseQRankSum=-5.259;DP=490;FS=12.006;HRun=0;HaplotypeScore=97.0457;InbreedingCoeff=0.4397;MQ=43.97;MQ0=23;MQRankSum=-1.059;QD=15.66;ReadPosRankSum=0.930;VQSLOD=5.4280;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:27:33.07:0,33,412	0/0:7,0:7:17.84:0,18,155	0/0:47,0:7:13.57:0,14,93	0/0:53,0:8:8.82:0,9,49	0/0:26,0:25:59.79:0,60,620	0/0:15,0:14:13.57:0,14,51	0/1:12,0:12:14.83:15,0,35	0/1:11,14:23:53.64:447,0,54	0/1:14,0:12:4.67:5,0,38	0/0:15,0:14:39.02:0,39,430	0/0:17,0:16:33.03:0,33,364	0/0:11,1:12:11.23:0,11,36	0/0:11,0:10:11.91:0,12,128	0/0:9,0:8:16.46:0,16,166	0/0:14,0:14:37.60:0,38,415	0/0:11,0:11:26.77:0,27,282	0/0:19,0:19:51.18:0,51,509	0/0:10,0:10:26.93:0,27,274	1/1:13,7:19:4.22:422,4,0	0/1:8,5:14:20:231,0,20	1/1:3,3:5:8.97:86,9,0	0/0:7,0:7:6:0,6,65	0/0:11,0:10:13.37:0,13,51	0/0:21,0:18:22.04:0,22,92	1/1:6,5:11:2.91:217,3,0	1/1:16,5:20:44.24:514,44,0	0/1:12,8:20:29.74:317,0,30	1/1:5,7:11:32.67:377,33,0
chr10	39967701	.	CTTTTTTTTTTTCT	C	5896.77	PASS	AB=0.816;AC=31;AF=0.554;AN=56;BaseQRankSum=-1.782;DP=460;FS=10.260;HRun=0;HaplotypeScore=156.8052;InbreedingCoeff=0.5924;MQ=41.33;MQ0=23;MQRankSum=-4.431;QD=23.87;ReadPosRankSum=0.052;VQSLOD=3.2276;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:32:36.10:0,36,1377	1/1:5,1:6:12.01:332,12,0	0/0:38,0:6:7.20:0,7,57	0/0:46,0:7:2.66:0,3,6	1/1:11,8:19:14.94:360,15,0	0/0:11,0:10:5.95:0,6,519	0/1:12,0:12:29.38:29,0,666	1/1:23,0:22:26.26:314,26,0	0/0:14,0:12:28.36:0,28,811	1/1:10,0:10:5.98:155,6,0	1/1:7,9:15:20.87:365,21,0	0/0:16,0:17:19.23:0,19,762	0/0:3,0:11:14.23:0,14,604	0/0:8,0:7:18.06:0,18,534	1/1:12,4:16:24.02:557,24,0	1/1:5,7:12:14.01:543,14,0	1/1:15,3:17:20.86:436,21,0	0/1:7,1:8:27.11:129,0,27	1/1:17,0:19:24:489,24,0	1/1:8,0:12:17.47:337,17,0	0/1:4,0:4:2.04:85,0,2	0/1:2,7:10:14.33:50,0,14	0/0:9,0:10:8.48:0,8,606	0/0:21,0:19:15.25:0,15,900	1/1:10,0:12:17.37:351,17,0	1/1:12,0:17:29.51:650,30,0	0/1:15,0:18:0.15:535,0,0	1/1:10,0:10:5.98:179,6,0
chr10	39967705	.	T	TC	538.94	PASS	AB=0.851;AC=9;AF=0.161;AN=56;BaseQRankSum=1.771;DP=431;FS=2.040;HRun=0;HaplotypeScore=98.5046;InbreedingCoeff=-0.0755;MQ=40.92;MQ0=21;MQRankSum=-5.006;QD=3.57;ReadPosRankSum=4.147;VQSLOD=3.0842;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:20.66:0,21,255	0/0:7,0:7:17.54:0,18,129	0/0:34,0:5:10.34:0,10,51	0/1:44,0:6:0.21:0,0,0	0/0:17,0:17:24.50:0,24,175	0/0:10,0:9:16.59:0,17,104	0/0:11,0:11:26.81:0,27,178	0/1:11,9:19:99:154,0,143	0/0:14,0:12:32.70:0,33,200	0/0:9,0:9:20.95:0,21,208	0/0:15,0:14:20.72:0,21,162	0/0:18,0:18:15.86:0,16,127	0/0:11,0:11:14.31:0,14,81	0/0:8,0:7:15.09:0,15,93	0/0:14,0:14:38.19:0,38,246	0/0:10,0:10:20.45:0,20,129	0/0:16,0:15:41.60:0,42,343	0/0:10,0:10:20.61:0,21,153	0/1:11,8:18:86.55:178,0,87	0/1:10,2:12:57.18:77,0,57	0/1:3,1:3:13.83:15,0,14	0/0:10,0:10:6:0,6,54	0/0:8,0:8:12.21:0,12,71	0/0:23,0:20:34.90:0,35,284	0/1:7,1:8:7.08:58,0,7	0/1:13,2:15:81.80:114,0,82	0/1:16,4:18:60.19:60,0,115	0/1:9,0:8:15.27:15,0,66
chr10	39967713	.	CT	C	3539.99	PASS	AB=0.976;AC=44;AF=0.786;AN=56;BaseQRankSum=1.452;DP=338;FS=6.562;HRun=11;HaplotypeScore=72.5814;InbreedingCoeff=0.6134;MQ=41.98;MQ0=18;MQRankSum=-2.387;QD=14.57;ReadPosRankSum=0.407;VQSLOD=3.9237;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:33.07:0,33,372	1/1:3,3:6:11.79:96,12,0	0/0:21,0:3:2.90:0,3,16	0/0:28,0:4:0:0,0,1	1/1:9,0:9:14.98:134,15,0	0/1:10,0:9:4.48:89,0,4	1/1:12,0:12:14.91:113,15,0	1/1:5,10:14:26.67:198,27,0	1/1:6,1:7:14.72:75,15,0	1/1:4,3:6:18.04:182,18,0	1/1:9,0:8:14.82:133,15,0	1/1:17,1:18:23.44:171,23,0	0/0:11,0:10:12.04:0,12,146	0/0:7,0:7:17.28:0,17,151	1/1:4,9:13:23.54:188,24,0	1/1:8,0:8:14.40:94,14,0	1/1:7,6:11:20.49:162,20,0	1/1:6,3:9:17.48:160,17,0	1/1:0,15:15:38.95:342,39,0	1/1:3,6:9:23.58:184,24,0	1/1:3,2:4:8.94:73,9,0	1/1:7,1:8:6.01:59,6,0	1/1:11,0:11:1.95:131,2,0	0/1:19,1:17:8.54:137,0,9	1/1:1,5:6:17.91:154,18,0	1/1:0,12:12:32.82:294,33,0	1/1:6,9:14:35.10:301,35,0	1/1:2,4:5:8.61:68,9,0
chr10	39968054	.	G	GGA	20432.03	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=13.665;DP=506;FS=0.000;HRun=0;HaplotypeScore=167.5780;InbreedingCoeff=0.9581;MQ=86.76;MQ0=0;MQRankSum=-14.746;QD=53.21;ReadPosRankSum=-4.207;VQSLOD=3.1880;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,108,1733	1/1:0,2:2:6.02:120,6,0	0/0:24,0:24:44.59:0,45,824	0/0:28,0:28:67.02:0,67,956	1/1:1,22:23:65.90:1133,66,0	1/1:2,18:20:57.20:1138,57,0	1/1:1,14:15:39.13:779,39,0	1/1:3,18:21:57.19:1108,57,0	1/1:1,20:21:63.18:1219,63,0	1/1:7,15:22:63.22:1211,63,0	1/1:2,24:26:72.20:1367,72,0	1/1:0,17:17:51.18:1019,51,0	0/0:11,0:11:30.10:0,30,486	0/0:23,0:23:69.22:0,69,1079	1/1:1,18:19:57.20:1102,57,0	1/1:0,11:11:33.11:662,33,0	1/1:1,7:8:17.55:280,18,0	1/1:0,6:6:18.06:364,18,0	1/1:0,22:22:66.23:1321,66,0	1/1:2,16:18:51.15:932,51,0	1/1:2,11:14:29.06:466,29,0	1/1:0,12:15:36.12:695,36,0	1/1:2,24:26:66.20:1249,66,0	1/1:1,7:8:12.04:189,12,0	1/1:2,20:22:66.23:1312,66,0	1/1:0,23:23:69.24:1390,69,0	1/1:2,18:20:60.19:1134,60,0	1/1:0,4:4:12.04:242,12,0
chr10	39968059	.	T	TG	13214.90	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=13.372;DP=557;FS=0.834;HRun=2;HaplotypeScore=208.0199;InbreedingCoeff=0.9611;MQ=81.97;MQ0=0;MQRankSum=-13.884;QD=30.59;ReadPosRankSum=-2.128;VQSLOD=3.7878;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,105,1301	1/1:1,2:3:9.03:126,9,0	0/0:24,0:24:57.15:0,57,672	0/0:30,0:30:69.35:0,69,776	1/1:2,23:25:48.13:662,48,0	1/1:6,17:23:48.11:654,48,0	1/1:6,11:17:39:482,39,0	1/1:10,19:29:72.24:1023,72,0	1/1:3,24:27:56.93:727,57,0	1/1:4,16:20:54.18:761,54,0	1/1:1,27:28:63.12:834,63,0	1/1:4,17:21:63.12:831,63,0	0/0:11,0:11:30.09:0,30,372	0/0:24,0:24:69.20:0,69,842	1/1:1,18:19:38.98:502,39,0	1/1:6,10:16:45.08:577,45,0	1/1:1,7:8:12.19:185,12,0	1/1:2,6:8:21.07:297,21,0	1/1:5,20:25:72.24:1015,72,0	1/1:2,19:22:48.14:659,48,0	1/1:5,11:16:17.51:205,18,0	1/1:3,12:15:14.02:153,14,0	1/1:6,20:27:38:524,38,0	1/1:0,8:8:11.64:169,12,0	1/1:1,20:21:51.08:671,51,0	1/1:3,21:24:72.24:1020,72,0	1/1:4,21:24:66.69:926,67,0	1/1:1,4:5:15.05:214,15,0
chr10	39969992	.	AGTGTGTGTGTGT	A	3917.43	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=5.798;DP=664;FS=16.729;HRun=0;HaplotypeScore=230.5761;InbreedingCoeff=0.8416;MQ=68.46;MQ0=11;MQRankSum=-4.069;QD=23.74;ReadPosRankSum=3.443;VQSLOD=1.4934;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:30:24.08:0,24,1191	0/0:13,0:13:15.04:0,15,551	0/1:36,0:21:4.39:4,0,231	0/0:48,0:32:20.97:0,21,869	0/0:21,0:24:13.46:0,13,497	1/1:10,9:19:18.05:627,18,0	1/1:10,6:16:12:333,12,0	0/0:33,0:33:45.15:0,45,1895	1/1:13,17:31:29.90:1040,30,0	0/0:23,0:26:48.16:0,48,2069	0/0:15,0:15:14.89:0,15,690	1/1:8,5:14:21.07:640,21,0	0/0:26,0:28:33.58:0,34,1292	0/0:33,0:31:27.08:0,27,1134	0/0:15,0:22:11.85:0,12,575	0/0:15,0:19:18.06:0,18,798	0/0:24,0:25:24.05:0,24,820	0/0:15,0:17:21.07:0,21,1121	0/0:19,0:19:20.41:0,20,620	0/0:17,0:19:12.51:0,13,324	0/0:24,0:24:30.10:0,30,1401	0/0:13,0:13:6.01:0,6,147	1/1:19,13:32:30.05:960,30,0	1/1:9,8:17:9.03:313,9,0	0/0:18,0:17:6.95:0,7,198	0/0:37,0:36:59.23:0,59,2788	0/0:19,0:19:36.12:0,36,1565	0/0:11,0:12:15.05:0,15,620
chr10	39971340	.	T	TGCCCTGCCCC	3135.46	PASS	AB=1.000;AC=31;AF=0.620;AN=50;BaseQRankSum=-3.366;DP=277;FS=11.579;HRun=0;HaplotypeScore=85.1042;InbreedingCoeff=0.5829;MQ=98.87;MQ0=0;MQRankSum=-4.813;QD=21.19;ReadPosRankSum=0.634;VQSLOD=1.5374;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:12,6:20:18.06:866,18,0	./.	0/1:15,0:15:5.92:6,0,41	0/0:32,0:29:12.10:0,12,404	1/1:3,1:5:3.01:147,3,0	1/1:9,0:9:3.01:66,3,0	1/1:10,0:10:8.96:72,9,0	0/0:14,0:14:9.02:0,9,137	1/1:2,3:6:3.01:150,3,0	1/1:5,0:5:5.96:48,6,0	1/1:6,0:6:6.01:176,6,0	1/1:3,2:7:3.01:150,3,0	1/1:4,1:7:3.01:150,3,0	1/1:8,5:15:9.03:449,9,0	1/1:5,3:11:6.02:299,6,0	1/1:4,2:6:3.01:150,3,0	1/1:5,3:11:9.03:448,9,0	1/1:9,0:8:5.95:103,6,0	0/0:13,0:13:8.12:0,8,200	0/0:6,0:6:9.02:0,9,199	0/0:18,0:18:30.08:0,30,709	1/1:5,0:5:3:27,3,0	./.	./.	0/0:7,0:7:12.01:0,12,293	0/0:13,0:13:15.03:0,15,384	0/0:10,0:10:21.06:0,21,501	0/0:1,0:1:3.01:0,3,90
chr10	39972631	.	A	AT	4185.12	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-13.776;DP=558;FS=0.846;HRun=4;HaplotypeScore=51.9387;InbreedingCoeff=0.9979;MQ=74.71;MQ0=0;MQRankSum=-1.389;QD=37.70;ReadPosRankSum=0.940;VQSLOD=3.5209;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:87.19:0,87,954	0/0:10,0:10:27.04:0,27,285	0/0:10,0:10:30.05:0,30,306	0/0:13,0:13:36.07:0,36,388	0/0:24,0:24:66.19:0,66,748	1/1:1,27:28:72.24:985,72,0	1/1:0,10:10:30.10:410,30,0	0/0:37,0:37:99:0,99,1109	1/1:0,20:20:57.19:779,57,0	0/0:22,0:22:66.19:0,66,749	0/0:34,0:34:96.27:0,96,1082	1/1:0,19:19:51.17:698,51,0	0/0:22,0:22:57.15:0,57,636	0/0:20,0:20:57.13:0,57,624	0/0:19,0:19:57.15:0,57,637	0/0:18,0:18:51.14:0,51,571	0/0:15,0:15:36.10:0,36,408	0/0:8,0:8:21.06:0,21,238	0/0:22,0:22:63.16:0,63,699	0/0:24,0:24:69.18:0,69,772	0/0:15,0:15:45.13:0,45,510	0/0:17,0:17:48.11:0,48,523	1/1:0,20:20:54.65:739,55,0	1/1:0,14:14:42.14:574,42,0	0/0:20,0:20:60.17:0,60,681	0/0:34,0:34:96.22:0,96,1067	0/0:26,0:26:75.21:0,75,850	0/0:7,0:7:21.06:0,21,238
chr10	39974256	.	C	CT	2534.16	PASS	AB=1.000;AC=24;AF=0.429;AN=56;BaseQRankSum=12.057;DP=450;FS=15.003;HRun=3;HaplotypeScore=56.0265;InbreedingCoeff=0.5828;MQ=61.68;MQ0=0;MQRankSum=1.044;QD=11.62;ReadPosRankSum=3.603;VQSLOD=0.5991;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:72.09:0,72,813	0/1:8,0:8:13.13:13,0,39	0/0:5,0:4:9.03:0,9,108	0/0:5,0:5:11.62:0,12,115	0/1:33,0:33:15.70:139,0,16	1/1:2,8:10:30.07:386,30,0	1/1:0,8:8:15.05:210,15,0	0/0:28,0:28:75.15:0,75,827	1/1:0,12:12:24.08:335,24,0	0/1:24,0:24:12.18:58,0,12	1/1:14,0:14:20.79:66,21,0	1/1:1,10:11:27.09:377,27,0	0/0:21,0:21:60.17:0,60,699	0/0:14,0:14:36.10:0,36,420	1/1:15,0:15:7.07:65,7,0	0/1:8,0:8:1.93:2,0,62	0/1:28,0:28:10.28:105,0,10	1/1:16,0:16:27.53:117,28,0	0/0:16,0:16:45.10:0,45,499	0/0:30,0:30:87.19:0,87,969	0/0:11,0:11:33.09:0,33,386	0/1:8,0:8:10.05:27,0,10	1/1:0,15:15:36.12:503,36,0	1/1:0,8:8:24.08:335,24,0	0/0:19,0:19:57.15:0,57,661	0/0:24,0:24:69.15:0,69,792	0/0:27,0:27:78.21:0,78,910	0/0:6,0:6:18.02:0,18,191
chr10	39974259	.	T	TA	4898.33	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-3.105;DP=452;FS=15.749;HRun=9;HaplotypeScore=50.1043;InbreedingCoeff=0.9611;MQ=62.86;MQ0=0;MQRankSum=0.454;QD=21.97;ReadPosRankSum=0.931;VQSLOD=3.9650;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:68.35:0,68,581	1/1:2,6:8:12.03:133,12,0	0/0:6,0:5:8.99:0,9,78	0/0:5,0:5:8.98:0,9,78	1/1:3,31:34:70.14:974,70,0	1/1:10,0:10:23.22:129,23,0	1/1:8,0:8:14.52:81,15,0	0/0:30,0:30:71.90:0,72,607	1/1:12,0:12:23.30:132,23,0	1/1:4,24:28:72.62:770,73,0	1/1:1,13:14:35.09:358,35,0	1/1:10,0:10:26.27:151,26,0	0/0:20,0:20:53.95:0,54,460	0/0:12,0:12:32.99:0,33,286	1/1:1,14:15:42.11:465,42,0	1/1:3,5:8:9.02:100,9,0	1/1:4,23:27:60.16:664,60,0	1/1:1,15:16:39.01:403,39,0	0/0:15,0:15:32.98:0,33,286	0/0:30,0:30:68.96:0,69,595	0/0:12,0:12:32.98:0,33,283	1/1:1,7:8:21.06:232,21,0	1/1:17,0:17:15.59:178,16,0	1/1:8,0:8:23.25:131,23,0	0/0:19,0:19:53.99:0,54,468	0/0:23,0:23:62.98:0,63,547	0/0:26,0:26:71.98:0,72,625	0/0:6,0:6:11.99:0,12,104
chr10	39975305	.	TC	T	6281.24	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=8.257;DP=537;FS=8.839;HRun=2;HaplotypeScore=61.8601;InbreedingCoeff=0.9913;MQ=71.88;MQ0=0;MQRankSum=-1.470;QD=35.89;ReadPosRankSum=2.950;VQSLOD=5.2360;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:60.19:0,60,877	1/1:0,8:8:24.08:312,24,0	0/0:12,0:12:30.07:0,30,411	0/0:4,0:4:11.40:0,11,127	1/1:1,23:24:69.22:890,69,0	0/0:18,0:18:54.17:0,54,784	0/0:9,0:9:27.09:0,27,404	0/0:32,0:32:93.29:0,93,1338	0/0:14,0:14:39.13:0,39,584	1/1:0,19:19:57.19:740,57,0	1/1:1,34:35:99:1266,99,0	0/0:16,0:16:39.08:0,39,558	0/0:23,0:23:69.23:0,69,1029	0/0:13,0:13:39.12:0,39,564	1/1:0,12:12:33.11:428,33,0	1/1:1,23:24:60.19:779,60,0	1/1:0,19:19:54.18:700,54,0	1/1:0,22:22:57.19:738,57,0	0/0:23,0:23:66.22:0,66,971	0/0:28,0:28:81.27:0,81,1213	0/0:20,0:20:60.19:0,60,879	1/1:1,11:12:33.11:428,33,0	0/0:19,0:19:57.11:0,57,821	0/0:5,0:5:15.05:0,15,224	0/0:23,0:23:69.22:0,69,1012	0/0:26,1:27:39.30:0,39,1068	0/0:41,0:41:99:0,120,1777	0/0:15,0:15:45.15:0,45,672
chr10	39975326	.	TAAG	T	3471.52	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=4.256;DP=524;FS=7.067;HRun=0;HaplotypeScore=88.9126;InbreedingCoeff=0.9715;MQ=69.29;MQ0=0;MQRankSum=-3.353;QD=41.83;ReadPosRankSum=2.378;VQSLOD=4.7826;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:36.11:0,36,738	0/0:7,0:7:21.06:0,21,439	0/0:7,0:7:11.19:0,11,292	0/0:6,0:6:8.21:0,8,230	0/0:28,0:28:84.26:0,84,1804	1/1:0,14:14:39.13:664,39,0	1/1:0,12:12:36.12:613,36,0	0/0:29,0:29:84.26:0,84,1782	1/1:2,13:15:36.12:612,36,0	0/0:22,0:22:63.22:0,63,1453	0/0:35,0:35:99:0,102,2244	1/1:0,16:16:39.13:664,39,0	0/0:24,0:24:72.19:0,72,1560	0/0:14,0:14:42.12:0,42,868	0/0:11,0:11:33.11:0,33,760	0/0:17,0:17:45.15:0,45,998	0/0:19,0:19:54.17:0,54,1197	0/0:22,0:22:57.10:0,57,1141	0/0:21,0:21:59.78:0,60,1262	0/0:30,0:30:87.27:0,87,1874	0/0:24,0:24:69.24:0,69,1521	0/0:11,0:11:33.11:0,33,760	1/1:1,17:18:42.14:715,42,0	1/1:0,8:8:12.04:204,12,0	0/0:23,0:23:63.20:0,63,1389	0/0:30,0:30:90.28:0,90,1945	0/0:34,0:34:99:0,99,2137	0/0:13,0:13:39.10:0,39,809
chr10	39975507	.	CT	C	2568.95	PASS	AB=0.823;AC=18;AF=0.321;AN=56;BaseQRankSum=0.350;DP=599;FS=2.624;HRun=12;HaplotypeScore=79.8153;InbreedingCoeff=0.5981;MQ=79.49;MQ0=0;MQRankSum=-0.384;QD=10.66;ReadPosRankSum=0.992;VQSLOD=3.4079;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,1:31:51.95:0,52,692	0/0:0,0:10:22.95:0,23,123	0/1:18,2:20:24.89:25,0,129	0/0:19,0:17:26.38:0,26,215	0/0:11,0:30:55.09:0,55,342	0/0:21,2:23:27.80:0,28,451	0/0:22,2:24:24.66:0,25,562	1/1:8,28:37:31.03:510,31,0	0/0:25,4:29:28.52:0,29,616	0/0:11,0:31:67.02:0,67,439	0/0:7,0:34:78.49:0,78,467	0/0:19,3:23:4.17:0,4,336	0/0:21,2:23:19.60:0,20,525	0/0:15,2:17:1.62:0,2,369	0/1:4,2:24:9.13:9,0,207	0/0:4,0:16:31.41:0,31,168	0/1:3,1:10:6.03:6,0,54	0/0:1,0:7:14.20:0,14,71	1/1:4,6:10:17.75:133,18,0	1/1:1,14:15:32.83:255,33,0	0/1:9,22:31:10.65:416,0,11	0/0:2,0:13:31.66:0,32,183	0/0:14,0:15:34.15:0,34,322	0/0:13,0:13:33.07:0,33,335	1/1:4,19:25:2.82:369,3,0	1/1:4,22:28:46.75:424,47,0	1/1:7,20:29:36.36:446,36,0	1/1:3,8:11:6.42:165,6,0
chr10	39975895	.	C	CT	8610.16	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-14.515;DP=545;FS=2.425;HRun=8;HaplotypeScore=48.0645;InbreedingCoeff=0.9904;MQ=69.80;MQ0=0;MQRankSum=0.850;QD=27.96;ReadPosRankSum=0.055;VQSLOD=5.2582;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:13.35:0,13,279	0/0:11,0:11:30.01:0,30,275	0/0:8,0:8:24:0,24,213	0/0:7,0:8:13.23:0,13,107	0/0:29,0:29:78.90:0,79,711	1/1:6,23:29:44.75:769,45,0	1/1:1,9:10:27.08:312,27,0	1/1:6,26:32:47.75:803,48,0	1/1:4,20:24:63.18:722,63,0	0/0:36,0:36:84.04:0,84,766	0/0:20,0:20:57.03:0,57,521	1/1:0,18:18:54.16:623,54,0	0/0:24,0:24:69.03:0,69,631	0/0:22,0:22:57.02:0,57,522	0/0:11,0:11:30.02:0,30,275	0/0:19,1:20:19.41:0,19,432	0/0:16,0:16:48.03:0,48,439	0/0:9,0:9:24.01:0,24,219	1/1:7,18:25:57.13:622,57,0	1/1:3,22:25:66.20:762,66,0	1/1:2,6:9:23.90:256,24,0	0/0:9,0:9:18:0,18,165	1/1:2,21:23:60.18:692,60,0	1/1:0,18:18:48.14:554,48,0	1/1:3,21:24:48.14:554,48,0	1/1:5,20:25:35.72:665,36,0	1/1:3,27:32:83.91:929,84,0	1/1:4,10:14:30.09:346,30,0
chr10	39976241	.	CT	C	2731.21	PASS	AB=0.897;AC=20;AF=0.357;AN=56;BaseQRankSum=10.898;DP=478;FS=16.107;HRun=11;HaplotypeScore=48.0366;InbreedingCoeff=0.6981;MQ=69.32;MQ0=0;MQRankSum=0.684;QD=12.64;ReadPosRankSum=-0.022;VQSLOD=1.4679;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:66.97:0,67,687	0/0:13,1:14:14.42:0,14,348	0/1:11,1:11:3.60:4,0,165	0/0:5,0:5:5.98:0,6,51	0/0:32,0:32:86.87:0,87,893	0/0:14,1:16:5.26:0,5,246	0/1:8,1:9:9.62:10,0,105	1/1:5,27:32:80.80:654,81,0	0/0:16,0:16:39.10:0,39,416	0/0:19,0:19:54.13:0,54,570	0/1:16,2:19:5.03:5,0,385	0/0:11,0:12:29.90:0,30,283	0/0:22,1:23:23.43:0,23,429	0/0:16,0:16:42.09:0,42,440	0/1:16,2:18:1.17:1,0,400	0/0:10,0:10:24.05:0,24,250	0/0:16,0:16:30.55:0,31,321	0/0:20,1:21:26.42:0,26,458	1/1:4,11:15:32.93:271,33,0	1/1:3,25:29:6.94:456,7,0	1/1:4,8:12:23.95:197,24,0	0/0:10,1:11:5.43:0,5,263	0/0:18,0:19:38.24:0,38,434	0/0:6,0:6:18.03:0,18,183	1/1:2,14:16:38.95:320,39,0	1/1:3,17:21:32.73:405,33,0	1/1:4,23:27:56.91:468,57,0	1/1:1,5:6:17.82:138,18,0
chr10	39977226	.	TA	T	3123.42	PASS	AB=0.625;AC=49;AF=0.875;AN=56;BaseQRankSum=-2.053;DP=388;FS=2.568;HRun=15;HaplotypeScore=53.9882;InbreedingCoeff=0.3954;MQ=63.82;MQ0=2;MQRankSum=1.280;QD=8.85;ReadPosRankSum=1.562;VQSLOD=2.9675;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,12:15:23.62:152,24,0	1/1:1,4:5:8.86:58,9,0	0/0:22,0:9:5.98:0,6,47	0/0:12,0:8:5.40:0,5,44	1/1:3,11:14:29.09:181,29,0	1/1:2,0:18:28.51:82,29,0	1/1:0,0:5:10.19:29,10,0	1/1:12,26:38:61.51:393,62,0	1/1:4,0:17:22.34:64,22,0	1/1:2,9:10:23.60:154,24,0	1/1:6,9:15:16.46:113,16,0	1/1:5,0:18:24.14:70,24,0	0/1:2,5:8:4.51:86,0,5	1/1:1,6:7:17.74:115,18,0	1/1:6,6:13:16.59:102,17,0	0/1:5,8:13:0.08:110,0,0	1/1:4,14:18:29.51:192,30,0	1/1:2,9:11:18.98:119,19,0	0/1:10,5:18:42.04:84,0,42	1/1:5,10:16:13.92:200,14,0	1/1:0,5:5:8.87:58,9,0	1/1:0,1:1:2.96:19,3,0	1/1:4,0:15:18.18:53,18,0	1/1:0,0:6:12.22:35,12,0	1/1:3,9:12:20.64:135,21,0	1/1:8,13:23:33.49:203,33,0	1/1:6,18:24:56.14:365,56,0	1/1:1,4:5:11.82:77,12,0
chr10	39978364	.	TA	T	4170.20	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=13.238;DP=604;FS=2.455;HRun=1;HaplotypeScore=62.4996;InbreedingCoeff=0.9652;MQ=74.45;MQ0=0;MQRankSum=-1.011;QD=36.26;ReadPosRankSum=4.107;VQSLOD=3.9585;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:84.29:0,84,1285	0/0:18,0:18:54.17:0,54,804	0/0:19,0:19:47.45:0,47,613	0/0:7,0:6:3.04:0,3,105	0/0:47,0:47:99:0,141,2068	1/1:0,31:31:81.27:1132,81,0	1/1:0,15:15:42.14:586,42,0	0/0:27,0:27:81.22:0,81,1140	1/1:0,14:14:36.12:503,36,0	0/0:27,0:27:81.28:0,81,1239	0/0:15,0:15:45.10:0,45,622	1/1:0,19:19:57.19:797,57,0	0/0:17,0:17:51.12:0,51,714	0/0:30,0:30:90.26:0,90,1314	0/0:18,0:18:54.16:0,54,783	0/0:23,0:23:69.20:0,69,1008	0/0:12,0:12:36.10:0,36,526	0/0:15,0:15:41.99:0,42,583	0/0:21,0:21:63.19:0,63,909	0/0:29,0:29:87.27:0,87,1290	0/0:19,0:19:57.16:0,57,828	0/0:26,0:26:77.84:0,78,1135	1/1:0,21:21:51.13:691,51,0	1/1:0,15:15:33.11:461,33,0	0/0:21,0:21:63.20:0,63,941	0/0:34,0:34:99:0,102,1505	0/0:26,0:26:78.25:0,78,1172	0/0:10,0:10:27.06:0,27,370
chr10	39978920	.	GC	G	6577.62	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=12.907;DP=555;FS=2.489;HRun=1;HaplotypeScore=55.3783;InbreedingCoeff=0.9966;MQ=78.20;MQ0=0;MQRankSum=0.624;QD=38.92;ReadPosRankSum=-1.124;VQSLOD=4.9177;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:66.23:0,66,1054	0/0:8,0:8:24.07:0,24,361	0/0:17,1:18:33.74:0,34,746	0/0:17,0:17:40.81:0,41,669	0/0:32,0:32:93.30:0,93,1460	0/0:35,0:35:99:0,105,1677	0/0:12,0:12:36.11:0,36,551	1/1:0,25:25:75.23:1016,75,0	0/0:17,0:17:51.17:0,51,815	0/0:14,0:14:42.14:0,42,650	0/0:23,0:23:69.24:0,69,1099	0/0:17,0:17:51.17:0,51,815	0/0:24,0:24:72.25:0,72,1148	0/0:24,0:24:72.21:0,72,1102	0/0:19,0:19:57.19:0,57,911	0/0:20,0:20:60.19:0,60,936	0/0:23,0:23:69.01:0,69,1044	0/0:18,0:18:48.97:0,49,808	1/1:0,14:14:42.11:553,42,0	1/1:0,36:36:99:1446,105,0	1/1:0,11:11:27.09:377,27,0	0/0:10,0:10:30.10:0,30,479	0/0:20,0:19:60.20:0,60,955	0/0:13,0:13:36.08:0,36,526	1/1:0,27:27:69.23:965,69,0	1/1:0,19:19:57.19:796,57,0	1/1:0,32:32:87.29:1216,87,0	1/1:0,5:5:15.05:209,15,0
chr10	39980691	.	AT	A	3457.27	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-3.275;DP=491;FS=2.300;HRun=9;HaplotypeScore=69.9389;InbreedingCoeff=0.9553;MQ=79.09;MQ0=0;MQRankSum=-0.709;QD=22.45;ReadPosRankSum=1.780;VQSLOD=4.6369;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:60.18:0,60,692	1/1:0,9:9:24.01:220,24,0	0/0:21,0:18:19.35:0,19,229	0/0:21,0:20:27.10:0,27,326	1/1:4,25:29:69.02:631,69,0	0/0:26,0:26:75.22:0,75,865	0/0:6,0:6:12.04:0,12,138	0/0:8,0:38:82.19:0,82,412	0/0:8,0:8:21.06:0,21,242	1/1:3,21:24:60.03:549,60,0	1/1:1,21:22:60.03:549,60,0	0/0:15,0:15:33.10:0,33,381	0/0:20,0:20:48.12:0,48,542	0/0:11,1:12:8.64:0,9,353	1/1:0,16:16:42.02:384,42,0	1/1:2,10:12:21.01:192,21,0	1/1:1,17:18:45.02:411,45,0	1/1:2,14:16:33.02:302,33,0	0/0:14,0:31:66.45:0,66,348	0/0:2,0:13:31.28:0,31,159	0/0:1,0:6:11.36:0,11,58	1/1:0,8:8:24.01:220,24,0	0/0:16,0:16:42.10:0,42,471	0/0:5,0:5:6.02:0,6,69	0/0:3,0:25:62.50:0,62,318	0/0:4,0:19:42.65:0,43,217	0/0:2,0:26:56.82:0,57,288	0/0:0,0:5:11.36:0,11,58
chr10	39981510	.	CTG	C	7019.91	PASS	AB=0.935;AC=33;AF=0.589;AN=56;BaseQRankSum=10.801;DP=654;FS=3.087;HRun=0;HaplotypeScore=110.5852;InbreedingCoeff=0.7803;MQ=71.76;MQ0=5;MQRankSum=-3.520;QD=19.13;ReadPosRankSum=1.296;VQSLOD=5.1898;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:74.89:0,75,1144	1/1:0,4:4:9.03:109,9,0	0/0:41,0:31:51.06:0,51,675	0/0:25,0:22:31.54:0,32,395	1/1:8,13:22:33.05:462,33,0	1/1:3,17:20:42.13:509,42,0	1/1:5,23:27:60.18:727,60,0	0/1:35,3:37:9.75:10,0,710	1/1:4,25:29:66.20:800,66,0	1/1:7,23:30:75.09:819,75,0	1/1:2,12:15:33.05:400,33,0	1/1:5,19:23:54.17:654,54,0	0/0:27,0:27:54.16:0,54,832	0/0:21,0:21:51.17:0,51,822	1/1:7,6:13:20.99:254,21,0	1/1:6,17:24:56.66:630,57,0	1/1:5,14:19:29.04:426,29,0	1/1:3,5:8:12.04:145,12,0	0/1:17,1:17:9.30:9,0,348	0/0:23,0:23:51.09:0,51,791	0/0:43,1:44:29.79:0,30,950	1/1:3,13:15:36.11:436,36,0	1/1:6,9:15:30.06:339,30,0	1/1:6,11:16:20.59:254,21,0	0/0:28,0:28:42.08:0,42,611	0/1:25,2:27:34.39:34,0,723	0/0:23,0:23:39.13:0,39,615	0/0:14,0:14:27.07:0,27,410
chr10	39981574	.	TAC	T	706.16	PASS	AB=0.960;AC=11;AF=0.196;AN=56;BaseQRankSum=-3.288;DP=714;FS=5.379;HRun=0;HaplotypeScore=238.5298;InbreedingCoeff=-0.2308;MQ=55.58;MQ0=6;MQRankSum=-0.463;QD=2.58;ReadPosRankSum=-5.336;VQSLOD=1.2182;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:44.48:0,44,617	0/1:6,0:5:35.17:35,0,44	0/0:30,0:18:47.39:0,47,792	0/1:22,3:15:15.87:16,0,412	0/1:35,0:33:99:111,0,355	0/0:29,0:29:64.09:0,64,826	0/0:30,0:28:54.99:0,55,593	0/1:25,13:36:99:370,0,787	0/0:35,0:35:79.39:0,79,1089	0/1:37,0:37:99:187,0,816	0/0:14,0:12:11.81:0,12,177	0/0:37,0:37:50.53:0,51,792	0/0:21,0:21:48.04:0,48,567	0/0:24,0:24:62.71:0,63,710	0/1:16,0:16:12.42:12,0,59	0/1:33,0:33:4.24:4,0,443	0/0:24,0:24:6.11:0,6,388	0/1:11,1:11:18.21:18,0,227	0/1:14,0:14:0.11:0,0,397	0/0:28,0:28:27.97:0,28,214	0/0:29,0:29:9.23:0,9,107	0/1:30,0:26:82:82,0,287	0/0:18,0:18:31.47:0,31,351	0/0:17,0:16:10.73:0,11,118	0/0:39,0:38:26.17:0,26,178	0/1:28,0:28:7.56:8,0,660	0/0:26,0:26:24.91:0,25,196	0/0:8,0:7:11.90:0,12,128
chr10	39981576	.	C	CGTGTACGTGT	9413.37	PASS	AB=0.884;AC=39;AF=0.696;AN=56;BaseQRankSum=2.976;DP=743;FS=35.207;HRun=0;HaplotypeScore=276.9095;InbreedingCoeff=-0.2852;MQ=52.60;MQ0=6;MQRankSum=-6.537;QD=13.18;ReadPosRankSum=3.055;VQSLOD=2.7309;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:15,0:32:80.33:80,0,354	0/1:6,0:6:25.57:130,0,26	0/0:29,0:16:32.99:0,33,530	0/1:25,0:14:10.59:11,0,313	0/1:32,0:34:99:148,0,209	1/1:23,0:29:29.32:332,29,0	0/1:26,0:28:9.04:239,0,9	1/1:37,0:37:67.71:928,68,0	1/1:34,0:34:5.02:386,5,0	0/1:34,0:35:99:443,0,437	0/1:12,0:11:40.60:91,0,41	1/1:31,0:37:23.23:295,23,0	0/1:7,0:20:30.62:31,0,230	0/1:9,0:27:66.88:67,0,261	1/1:11,0:20:7.39:68,7,0	0/1:31,0:34:99:336,0,284	0/1:21,0:23:99:133,0,261	0/1:11,0:11:99:129,0,148	1/1:6,8:17:30:559,30,0	1/1:1,22:29:21.05:859,21,0	1/1:6,18:35:2.94:129,3,0	0/1:26,0:23:99:100,0,113	0/1:14,0:18:26.69:117,0,27	0/1:14,0:15:8.14:37,0,8	1/1:4,29:45:18.06:834,18,0	1/1:6,19:35:37.70:1794,38,0	1/1:1,17:27:8.91:854,9,0	1/1:3,1:8:14.99:286,15,0
chr10	39981580	.	T	TAC	5102.75	PASS	AB=0.990;AC=25;AF=0.446;AN=56;BaseQRankSum=6.948;DP=715;FS=3.505;HRun=0;HaplotypeScore=216.7614;InbreedingCoeff=0.5892;MQ=48.21;MQ0=7;MQRankSum=-6.830;QD=13.02;ReadPosRankSum=4.325;VQSLOD=4.3978;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:48.26:0,48,531	0/0:7,0:6:11.62:0,12,120	0/0:27,0:14:39.13:0,39,596	0/0:26,0:14:35.33:0,35,531	0/0:35,0:33:17.02:0,17,438	1/1:14,17:31:40.59:831,41,0	1/1:12,14:24:33.10:463,33,0	0/1:38,2:38:99:277,0,621	1/1:12,22:34:56.50:924,57,0	0/0:36,0:36:99:0,100,1149	0/0:12,0:10:5.23:0,5,53	1/1:13,21:34:69.50:923,69,0	0/0:20,0:20:41.21:0,41,435	0/0:27,0:27:52.73:0,53,582	0/1:18,0:18:0.09:10,0,0	0/0:34,0:34:30.41:0,30,401	0/0:25,0:25:45.54:0,46,530	0/0:12,0:11:26.42:0,26,273	0/1:18,0:16:99:161,0,144	1/1:27,0:27:21.85:217,22,0	1/1:29,0:28:3.22:13,3,0	0/0:30,0:26:20.90:0,21,418	1/1:4,11:15:23.66:338,24,0	1/1:6,7:12:9.26:131,9,0	1/1:40,2:41:4.30:213,4,0	0/1:30,0:30:99:382,0,321	0/1:26,0:26:10.11:151,0,10	1/1:9,0:8:4.56:68,5,0
chr10	39981584	.	T	TAC	3113	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=6.391;DP=713;FS=6.596;HRun=0;HaplotypeScore=220.9750;InbreedingCoeff=0.7095;MQ=46.75;MQ0=9;MQRankSum=-6.570;QD=12.86;ReadPosRankSum=2.520;VQSLOD=2.9240;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:51.10:0,51,574	0/0:7,0:6:11.62:0,12,121	0/0:30,0:13:35.33:0,35,562	0/0:26,0:14:37.51:0,38,615	0/0:35,0:33:20.05:0,20,501	1/1:16,16:32:55.24:853,55,0	1/1:13,12:23:21.99:298,22,0	0/0:40,0:39:89.19:0,89,1063	1/1:16,18:34:45.61:710,46,0	0/0:34,0:34:93.69:0,94,1074	0/0:12,0:10:5.51:0,6,55	1/1:13,21:34:71.91:965,72,0	0/0:19,0:19:38.21:0,38,394	0/0:26,0:26:41.54:0,42,517	0/1:20,0:20:6.60:7,0,44	0/0:31,0:31:18.39:0,18,250	0/0:25,0:25:46.51:0,47,552	0/0:12,0:11:26.89:0,27,308	0/0:17,0:15:27.12:0,27,388	0/0:27,0:27:1.39:0,1,111	0/1:28,0:27:2.06:7,0,2	0/0:30,0:26:26.93:0,27,503	1/1:4,11:15:23.64:322,24,0	1/1:7,6:12:9.25:125,9,0	0/1:41,0:40:11.84:12,0,66	0/0:30,0:30:71.28:0,71,674	0/0:28,0:28:25.90:0,26,188	0/0:8,0:7:8.72:0,9,39
chr10	39983526	.	CA	C	2079.75	PASS	AB=0.873;AC=14;AF=0.250;AN=56;BaseQRankSum=7.798;DP=566;FS=0.861;HRun=11;HaplotypeScore=62.7793;InbreedingCoeff=0.7961;MQ=73.24;MQ0=0;MQRankSum=-0.144;QD=15.18;ReadPosRankSum=1.704;VQSLOD=4.2318;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:3,0:15:37.49:0,37,232	0/0:12,0:12:21.05:0,21,224	0/1:12,1:13:3.61:4,0,159	0/0:12,0:12:3.05:0,3,152	0/0:34,1:35:65.55:0,66,881	1/1:5,22:27:37.95:489,38,0	1/1:2,14:16:35.95:296,36,0	0/0:33,0:34:78.01:0,78,796	1/1:0,8:8:17.98:148,18,0	0/0:34,0:34:87.20:0,87,911	0/0:28,0:28:75.18:0,75,793	1/1:1,14:15:35.96:296,36,0	0/0:6,0:23:34.43:0,34,171	0/0:5,0:20:34.49:0,34,191	0/0:18,0:18:45.11:0,45,474	0/0:18,1:19:17.45:0,17,385	0/0:13,0:15:38.97:0,39,398	0/0:15,0:15:27.04:0,27,277	0/0:19,0:19:42.09:0,42,434	0/0:28,0:28:72.17:0,72,761	0/0:11,0:11:24.06:0,24,256	0/1:7,2:9:27.01:27,0,127	1/1:5,25:30:71.90:591,72,0	1/1:1,18:19:50.94:419,51,0	0/0:22,2:24:11.71:0,12,510	0/0:21,0:21:60.15:0,60,640	0/0:36,0:36:93.16:0,93,955	0/0:8,0:8:18.05:0,18,192
chr10	39984545	.	T	TA	2854.48	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=11.812;DP=669;FS=2.927;HRun=3;HaplotypeScore=67.2315;InbreedingCoeff=0.8833;MQ=87.04;MQ0=0;MQRankSum=-1.330;QD=41.37;ReadPosRankSum=2.367;VQSLOD=2.9416;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:30.10:0,30,405	0/0:16,0:16:48.16:0,48,671	0/0:22,0:23:42.65:0,43,856	0/0:23,0:22:57.18:0,57,777	0/0:32,0:32:90.23:0,90,1209	0/0:33,0:33:99:0,99,1379	0/0:14,0:14:42.14:0,42,587	0/0:32,0:32:96.31:0,96,1327	0/0:16,0:16:48.16:0,48,669	0/0:24,0:24:69.23:0,69,964	0/0:27,0:27:78.17:0,78,1044	1/1:0,19:19:57.19:911,57,0	0/0:17,0:17:51.17:0,51,712	0/0:27,0:27:78.22:0,78,1038	0/0:32,0:32:96.32:0,96,1339	0/0:26,0:26:78.26:0,78,1087	0/0:30,0:30:90.27:0,90,1237	0/0:15,0:15:45.15:0,45,627	0/0:20,0:20:60.20:0,60,837	0/0:32,0:32:96.32:0,96,1339	0/0:27,0:27:78.26:0,78,1090	0/0:21,0:21:63.21:0,63,878	1/1:0,21:21:57.19:910,57,0	1/1:2,27:29:0.37:1163,0,0	0/0:32,0:32:96.32:0,96,1341	0/0:28,0:28:84.27:0,84,1157	0/0:40,0:40:99:0,117,1635	0/0:3,0:3:9.03:0,9,126
chr10	39984802	.	GGTGTTAGAGTGATGGCAGAGTCA	G	2473.10	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=7.652;DP=881;FS=11.200;HRun=0;HaplotypeScore=512.0756;InbreedingCoeff=0.9203;MQ=81.13;MQ0=2;MQRankSum=-2.847;QD=15.65;ReadPosRankSum=2.418;VQSLOD=-0.6613;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:90.24:0,90,3443	0/0:14,0:14:18.43:0,18,420	0/0:40,0:35:15.04:0,15,255	0/0:52,0:50:24.42:0,24,439	0/0:33,0:33:47.72:0,48,869	1/1:26,0:26:32.94:471,33,0	1/1:28,0:27:31.33:402,31,0	0/0:40,0:40:36.09:0,36,776	1/1:30,0:30:40.50:543,40,0	0/0:30,0:30:44.97:0,45,919	0/0:23,0:23:22.28:0,22,489	1/1:19,0:19:30.07:519,30,0	0/0:34,0:34:69.17:0,69,2657	0/0:34,0:34:65.94:0,66,3182	0/0:40,0:40:83.26:0,83,1937	0/0:38,0:38:54.63:0,55,1308	0/0:30,0:29:33.56:0,34,1199	0/0:20,0:19:42.07:0,42,1005	0/0:22,0:22:38.98:0,39,1454	0/0:30,0:30:51.07:0,51,1305	0/0:51,0:51:85.45:0,85,3190	0/0:39,0:39:46.24:0,46,739	1/1:20,11:31:0.20:0,0,0	1/1:24,0:24:45.92:712,46,0	0/0:26,0:26:36.07:0,36,1435	0/0:40,0:40:60.16:0,60,2426	0/0:32,0:32:75.23:0,75,3576	0/0:3,0:3:3.01:0,3,195
chr10	39986085	.	A	ATATG	9581.69	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-12.449;DP=674;FS=6.995;HRun=0;HaplotypeScore=110.1361;InbreedingCoeff=0.9875;MQ=71.38;MQ0=0;MQRankSum=-3.848;QD=43.95;ReadPosRankSum=-0.346;VQSLOD=4.8963;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:36.12:0,36,602	0/0:15,0:15:36.10:0,36,575	0/0:24,0:23:48.15:0,48,741	0/0:20,0:19:33.10:0,33,527	0/0:21,0:21:57.18:0,57,917	0/0:27,0:27:72.23:0,72,1165	0/0:14,0:14:30.05:0,30,421	1/1:12,21:37:84.21:1635,84,0	0/0:24,0:24:57.18:0,57,924	0/0:24,0:24:57.17:0,57,885	0/0:25,0:25:57.19:0,57,953	0/0:32,0:32:72.25:0,72,1195	0/0:22,0:22:51.16:0,51,823	0/0:26,0:26:66.23:0,66,1097	0/0:43,0:43:99:0,105,1721	0/0:34,0:34:93.30:0,93,1525	0/0:19,0:19:45.15:0,45,752	0/0:13,0:13:18.06:0,18,288	1/1:12,7:20:33.09:676,33,0	1/1:9,22:31:19.08:1543,19,0	1/1:3,26:31:54.19:1335,54,0	0/0:23,0:23:60.15:0,60,902	0/0:21,0:21:54.14:0,54,822	0/0:14,0:14:36.12:0,36,598	1/1:4,19:23:39.13:960,39,0	1/1:5,25:30:31.06:1706,31,0	1/1:9,28:38:62.71:1505,63,0	1/1:0,6:6:9.03:222,9,0
chr10	39989222	.	TTC	T	624.63	PASS	AB=1.000;AC=37;AF=0.712;AN=52;BaseQRankSum=2.873;DP=508;FS=19.604;HRun=0;HaplotypeScore=68.0380;InbreedingCoeff=0.1152;MQ=73.46;MQ0=21;MQRankSum=3.662;QD=1.75;ReadPosRankSum=3.601;VQSLOD=-0.2769;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:19:11.88:82,12,0	1/1:4,0:4:2.99:24,3,0	./.	./.	1/1:25,0:25:2.98:21,3,0	0/1:24,0:24:6.13:8,0,6	1/1:24,0:24:2.73:24,3,0	0/0:30,0:30:2.49:0,2,6	1/1:15,0:14:2.83:24,3,0	0/1:14,0:13:11.63:29,0,12	1/1:18,0:18:2.99:23,3,0	1/1:7,0:7:2.98:22,3,0	1/1:17,0:17:2.98:22,3,0	1/1:9,0:9:5.95:42,6,0	1/1:14,0:14:11.90:84,12,0	0/0:12,0:16:0.47:0,0,1	1/1:17,0:17:14.34:97,14,0	0/0:14,0:14:2.94:0,3,18	0/1:22,0:20:12.02:13,0,12	0/0:10,0:10:2.97:0,3,21	1/1:20,0:19:2.84:14,3,0	1/1:12,0:12:8.92:63,9,0	1/1:13,0:13:7.20:45,7,0	1/1:12,8:15:4.46:21,4,0	1/1:19,0:19:2.92:17,3,0	0/1:23,0:22:2.98:30,0,3	0/1:18,0:17:45.27:49,0,45	0/0:14,0:12:2.60:0,3,10
chr10	39989274	.	CTGTG	C	3887.36	PASS	AB=0.784;AC=36;AF=0.750;AN=48;BaseQRankSum=-0.283;DP=451;FS=3.299;HRun=0;HaplotypeScore=92.0944;InbreedingCoeff=0.5543;MQ=46.82;MQ0=40;MQRankSum=1.439;QD=11.85;ReadPosRankSum=-1.348;VQSLOD=2.9968;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:23:8.41:0,8,179	1/1:8,0:8:18.06:259,18,0	./.	./.	1/1:8,10:18:3.01:35,3,0	./.	0/0:16,0:19:0.47:0,0,1	0/1:17,7:23:13.93:242,0,14	1/1:4,0:12:3.01:34,3,0	1/1:15,0:14:18.06:278,18,0	1/1:16,0:15:14.82:215,15,0	1/1:4,0:9:9.02:93,9,0	0/0:15,0:15:17.12:0,17,180	0/0:11,0:11:9.85:0,10,177	1/1:20,0:19:21.07:312,21,0	1/1:17,0:16:24.08:359,24,0	0/0:13,0:16:0.17:0,0,0	1/1:16,0:15:21.07:302,21,0	1/1:6,4:8:12.02:150,12,0	1/1:8,12:20:2.77:35,3,0	1/1:21,0:18:24.04:326,24,0	./.	0/1:17,6:21:0.01:0,0,0	1/1:26,0:16:11.08:172,11,0	1/1:8,0:16:3.01:36,3,0	1/1:8,14:19:39.06:547,39,0	1/1:23,0:22:24.07:311,24,0	1/1:11,0:7:14.98:183,15,0
chr10	39990857	.	GT	G	4651.59	PASS	AB=0.776;AC=28;AF=0.500;AN=56;BaseQRankSum=11.662;DP=437;FS=0.418;HRun=9;HaplotypeScore=43.9695;InbreedingCoeff=0.8309;MQ=73.87;MQ0=0;MQRankSum=-0.697;QD=21.14;ReadPosRankSum=0.721;VQSLOD=5.1265;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:90.27:0,90,1037	0/0:10,1:11:5.63:0,6,318	0/1:7,0:7:12.22:12,0,113	0/0:10,1:9:11.53:0,12,131	0/0:30,0:30:81.24:0,81,933	1/1:1,13:14:36.02:330,36,0	1/1:1,6:7:12.01:110,12,0	1/1:10,21:33:67.06:582,67,0	1/1:2,11:13:27.01:247,27,0	0/0:16,0:16:45.13:0,45,513	0/0:21,0:21:60.18:0,60,692	1/1:1,14:15:36.01:330,36,0	0/0:13,0:13:33.09:0,33,373	0/0:17,0:17:51.15:0,51,589	0/0:15,0:15:45.13:0,45,519	0/0:11,0:11:30.09:0,30,346	0/0:20,0:20:57.13:0,57,629	0/0:15,0:15:42.11:0,42,474	1/1:3,13:16:38.98:350,39,0	1/1:0,12:12:33.01:302,33,0	1/1:0,8:8:21.01:192,21,0	0/0:6,0:6:15.04:0,15,173	1/1:0,4:4:12.01:110,12,0	1/1:1,8:9:21.01:192,21,0	1/1:2,26:28:78.04:714,78,0	0/1:4,17:21:15.20:385,0,15	1/1:0,23:23:63.03:577,63,0	1/1:2,8:10:24.01:220,24,0
chr10	39991515	.	CACGTGTGT	C	4112.63	PASS	AB=0.991;AC=24;AF=0.444;AN=54;BaseQRankSum=11.201;DP=567;FS=33.973;HRun=0;HaplotypeScore=149.0679;InbreedingCoeff=0.5187;MQ=62.69;MQ0=4;MQRankSum=-8.348;QD=12.77;ReadPosRankSum=4.458;VQSLOD=0.9205;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:54.18:0,54,1204	1/1:0,10:10:12.51:330,13,0	0/0:22,0:18:52.71:0,53,870	0/0:29,0:16:46.71:0,47,844	1/1:0,0:26:15.03:343,15,0	0/1:23,0:23:99:197,0,194	0/1:17,0:18:82.49:82,0,352	0/0:24,0:24:70.78:0,71,1332	0/1:20,0:20:3.81:4,0,498	1/1:0,20:21:48.05:732,48,0	1/1:0,24:25:21.07:609,21,0	0/1:28,0:28:61.66:62,0,945	0/0:16,0:16:36.12:0,36,969	0/0:19,0:19:54.18:0,54,1811	1/1:0,31:31:15.05:445,15,0	1/1:0,20:22:17.83:499,18,0	1/1:0,27:27:9.03:244,9,0	1/1:0,17:17:6.02:180,6,0	0/0:12,0:12:33.10:0,33,543	0/0:17,0:17:27.09:0,27,400	0/0:16,0:16:36.12:0,36,625	1/1:0,12:12:6.02:180,6,0	0/1:18,0:18:99:161,0,316	0/1:24,0:24:44.21:44,0,582	0/0:18,0:18:42.14:0,42,945	0/0:27,0:27:81.28:0,81,1999	0/0:14,0:14:33.10:0,33,685	./.
chr10	39991517	.	CGTGTGTGTGT	C	2111.83	PASS	AB=0.921;AC=25;AF=0.463;AN=54;BaseQRankSum=9.132;DP=637;FS=11.163;HRun=0;HaplotypeScore=185.5064;InbreedingCoeff=0.4870;MQ=59.65;MQ0=6;MQRankSum=-6.675;QD=6.10;ReadPosRankSum=4.825;VQSLOD=1.5929;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:32.59:0,33,1348	0/1:11,0:11:7.30:22,0,7	0/0:22,0:17:5.95:0,6,65	0/0:30,0:16:9.02:0,9,195	1/1:26,0:26:15.05:348,15,0	1/1:5,15:23:30.08:734,30,0	0/1:12,6:18:60.74:323,0,61	0/0:37,0:37:75.24:0,75,2568	1/1:14,5:20:6.49:160,6,0	0/1:22,0:22:61.66:62,0,157	1/1:25,0:25:19.41:145,19,0	0/1:23,0:27:66.32:71,0,66	0/0:11,0:18:18.06:0,18,793	0/0:19,0:21:45.15:0,45,1957	1/1:31,0:31:11.39:41,11,0	1/1:22,0:22:15.51:173,16,0	0/1:28,0:28:6.03:6,0,15	1/1:17,0:17:3.92:14,4,0	0/0:17,0:17:19.46:0,19,473	0/1:20,0:20:0:0,0,0	0/0:20,0:20:9.03:0,9,336	1/1:13,0:13:5.34:23,5,0	1/1:9,0:19:15.01:126,15,0	0/1:19,0:24:1.71:51,0,2	0/0:29,0:28:27.09:0,27,962	0/0:38,0:37:67.76:0,68,2481	0/0:20,0:20:17.42:0,17,580	./.
chr10	39994703	.	T	TG	12360.20	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-2.810;DP=650;FS=7.079;HRun=2;HaplotypeScore=72.4762;InbreedingCoeff=0.9996;MQ=88.76;MQ0=0;MQRankSum=-2.522;QD=38.75;ReadPosRankSum=-1.169;VQSLOD=4.8198;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,105,1287	0/0:9,0:9:27.07:0,27,321	0/0:30,0:30:87.21:0,87,1021	0/0:20,0:20:51.10:0,51,593	0/0:20,0:20:60.19:0,60,744	1/1:4,20:24:66.21:931,66,0	1/1:0,31:31:84.24:1178,84,0	1/1:3,26:29:78.22:1053,78,0	1/1:1,11:12:36.11:500,36,0	0/0:25,0:25:75.23:0,75,920	0/0:25,0:25:69.20:0,69,843	1/1:1,21:23:63.21:900,63,0	0/0:20,0:20:54.16:0,54,657	0/0:28,0:28:81.20:0,81,963	0/0:30,0:30:87.25:0,87,1053	0/0:27,0:27:81.25:0,81,1004	0/0:27,0:27:81.25:0,81,1004	0/0:18,0:18:54.17:0,54,667	1/1:4,13:17:39.13:561,39,0	1/1:0,31:31:93.02:1224,93,0	1/1:3,26:29:81.24:1123,81,0	0/0:16,0:16:48.15:0,48,595	1/1:5,23:28:84.06:1086,84,0	1/1:3,17:20:57.15:791,57,0	1/1:2,19:21:60.06:796,60,0	1/1:2,22:24:72.23:1020,72,0	1/1:3,19:22:60.20:857,60,0	1/1:4,4:8:24.08:341,24,0
chr10	39994747	.	AT	A	6675.76	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=14.352;DP=609;FS=1.010;HRun=9;HaplotypeScore=84.6180;InbreedingCoeff=0.9981;MQ=82.52;MQ0=0;MQRankSum=-5.418;QD=22.48;ReadPosRankSum=-1.443;VQSLOD=4.9110;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:75.21:0,75,855	0/0:7,0:7:18.04:0,18,199	0/0:25,0:25:57.16:0,57,649	0/0:16,0:16:21.50:0,22,243	0/0:22,0:22:63.18:0,63,717	1/1:4,15:19:50.99:457,51,0	1/1:5,14:19:28.11:383,28,0	1/1:15,24:39:89.95:802,90,0	1/1:2,14:16:39.02:357,39,0	0/0:30,0:30:72.21:0,72,831	0/0:23,0:23:60.18:0,60,692	1/1:2,9:11:32.83:276,33,0	0/0:27,0:27:72.19:0,72,811	0/0:26,0:26:66.20:0,66,762	0/0:25,0:25:63.19:0,63,727	0/0:29,0:29:78.22:0,78,890	0/0:22,0:22:61.37:0,61,670	0/0:15,0:15:42.08:0,42,470	1/1:1,14:15:41.94:371,42,0	1/1:4,30:35:94.81:824,95,0	1/1:4,20:24:47.99:434,48,0	0/0:15,0:15:42.11:0,42,475	1/1:1,22:23:63.03:576,63,0	1/1:1,17:18:38.78:347,39,0	1/1:2,13:15:41.98:374,42,0	1/1:6,19:25:44.76:585,45,0	1/1:3,26:29:72:648,72,0	1/1:1,8:9:27:241,27,0
chr10	39997107	.	A	AAAAC	6000.38	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-0.761;DP=686;FS=0.000;HRun=0;HaplotypeScore=155.7506;InbreedingCoeff=0.9568;MQ=67.57;MQ0=3;MQRankSum=-9.098;QD=42.86;ReadPosRankSum=-2.668;VQSLOD=4.3722;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:75.24:0,75,1178	0/0:7,0:7:15.04:0,15,222	0/0:18,0:17:14.69:0,15,218	0/0:27,0:21:21.07:0,21,312	0/0:25,0:25:48.09:0,48,702	1/1:14,18:32:69.22:1575,69,0	1/1:16,14:30:42.16:1173,42,0	0/0:28,0:28:54.17:0,54,828	1/1:9,7:16:30.10:684,30,0	0/0:37,0:37:87.23:0,87,1316	0/0:11,0:11:30.09:0,30,459	1/1:7,9:16:42.10:852,42,0	0/0:29,0:29:31.59:0,32,716	0/0:21,0:21:9.68:0,10,645	0/0:37,0:37:69.21:0,69,1074	0/0:28,0:28:45.15:0,45,733	0/0:25,0:25:59.89:0,60,812	0/0:15,0:15:17.70:0,18,228	0/0:31,0:30:30.10:0,30,477	0/0:34,0:34:66.18:0,66,1000	0/0:16,0:16:30.07:0,30,438	0/0:19,0:19:39.12:0,39,611	1/1:13,12:24:57.16:1167,57,0	1/1:16,5:20:16.10:550,16,0	0/0:29,0:29:57.19:0,57,902	0/0:31,0:31:66.20:0,66,1022	0/0:44,0:44:96.32:0,96,1521	0/0:2,0:2:5.94:0,6,41
chr10	39997141	.	AC	A	16420.22	PASS	AB=1.000;AC=48;AF=0.857;AN=56;BaseQRankSum=-8.759;DP=718;FS=0.401;HRun=4;HaplotypeScore=108.2635;InbreedingCoeff=0.7879;MQ=71.40;MQ0=1;MQRankSum=-3.458;QD=26.83;ReadPosRankSum=1.294;VQSLOD=3.6049;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:20.09:0,20,271	1/1:1,11:12:27.08:321,27,0	0/0:35,0:25:36.57:0,37,514	0/0:34,0:22:17.40:0,17,342	1/1:1,29:30:83.97:933,84,0	1/1:0,31:31:84.25:987,84,0	1/1:6,14:20:41.71:471,42,0	1/1:3,43:46:99:1315,121,0	1/1:1,14:15:39.10:450,39,0	1/1:1,26:27:78.20:899,78,0	1/1:1,12:13:30.01:326,30,0	1/1:2,19:21:50.99:584,51,0	0/1:27,0:27:3.53:4,0,182	0/1:19,0:19:4.89:5,0,112	1/1:1,35:36:81.25:967,81,0	1/1:1,22:23:57.17:679,57,0	1/1:4,26:30:61.08:729,61,0	1/1:1,10:11:24.07:286,24,0	1/1:3,31:34:91.85:1034,92,0	1/1:1,32:33:87.27:1038,87,0	1/1:0,19:19:39.12:466,39,0	1/1:1,15:16:42.04:482,42,0	1/1:1,25:26:67.80:780,68,0	1/1:3,16:19:33.03:358,33,0	1/1:1,25:26:57.17:679,57,0	1/1:1,37:38:99:1270,108,0	1/1:0,35:35:99:1214,102,0	1/1:0,5:5:12.03:143,12,0
chr10	39997358	.	CT	C	7223.23	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=14.684;DP=659;FS=2.606;HRun=10;HaplotypeScore=87.2605;InbreedingCoeff=0.9925;MQ=66.51;MQ0=0;MQRankSum=-2.291;QD=21.24;ReadPosRankSum=2.952;VQSLOD=5.6604;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,114,1226	0/0:15,0:15:39.11:0,39,431	0/0:20,0:20:42.01:0,42,413	0/0:13,0:7:17.84:0,18,161	0/0:30,2:34:20.60:0,21,781	1/1:1,29:30:86.98:755,87,0	1/1:2,22:24:50.81:443,51,0	1/1:5,23:28:68.91:585,69,0	1/1:1,20:21:50.99:443,51,0	0/0:27,0:27:66.13:0,66,703	0/0:15,0:16:41.84:0,42,428	1/1:1,19:20:44.99:391,45,0	0/0:27,0:26:69.18:0,69,756	0/0:16,1:17:13.02:0,13,355	0/0:19,0:19:45.12:0,45,498	0/0:23,0:23:63.17:0,63,697	0/0:38,0:38:90.23:0,90,984	0/0:14,0:14:32.58:0,33,362	1/1:4,16:20:47.98:417,48,0	1/1:2,33:35:98.97:859,99,0	1/1:2,13:15:29.98:260,30,0	0/0:14,0:14:36.10:0,36,398	1/1:0,18:18:38.90:338,39,0	1/1:0,39:39:92.98:807,93,0	1/1:3,23:26:68.98:599,69,0	1/1:5,25:30:44.80:618,45,0	1/1:5,24:29:53.76:580,54,0	1/1:0,5:5:15:130,15,0
chr10	40001939	.	AGT	A	1138.87	PASS	AB=0.903;AC=29;AF=0.558;AN=52;BaseQRankSum=0.705;DP=530;FS=12.477;HRun=0;HaplotypeScore=126.0425;InbreedingCoeff=0.0900;MQ=64.23;MQ0=40;MQRankSum=-1.218;QD=3.38;ReadPosRankSum=0.264;VQSLOD=1.8230;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:23:10.94:0,11,55	0/1:5,0:5:2.82:28,0,3	./.	./.	1/1:10,4:12:6.48:63,6,0	0/0:16,0:15:2.03:0,2,26	0/0:14,0:12:6.49:0,6,84	0/0:20,0:30:2.65:0,3,14	0/1:16,0:15:20.38:20,0,76	0/1:15,0:20:13.87:186,0,14	1/1:10,1:9:2.85:32,3,0	0/1:20,0:21:45.66:46,0,68	0/1:17,0:20:17.67:18,0,57	1/1:12,1:21:9.15:53,9,0	1/1:11,4:15:12.01:119,12,0	1/1:16,5:19:20.43:151,20,0	0/1:19,4:22:37.14:78,0,37	0/1:14,2:15:38.84:100,0,39	0/1:13,1:11:2.80:27,0,3	1/1:10,2:11:2.96:19,3,0	0/1:40,6:35:13.43:24,0,13	1/1:7,0:7:1.25:3,1,0	0/0:9,0:9:2.37:0,2,8	0/0:21,0:21:11.50:0,11,90	1/1:10,0:16:6.35:36,6,0	1/1:11,5:17:17.91:177,18,0	1/1:10,4:15:12:112,12,0	0/0:6,0:4:1.25:0,1,3
chr10	40001968	.	G	GTC	1401.56	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=3.035;DP=483;FS=19.072;HRun=0;HaplotypeScore=129.8844;InbreedingCoeff=0.1068;MQ=40.10;MQ0=48;MQRankSum=2.050;QD=5.54;ReadPosRankSum=2.977;VQSLOD=1.8969;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:29:42.81:0,43,273	0/0:4,0:3:5.57:0,6,56	0/0:7,0:1:2.96:0,3,19	0/0:16,0:2:5.96:0,6,43	1/1:11,2:11:12.02:140,12,0	0/0:12,0:9:11.90:0,12,109	0/0:19,0:11:10.22:0,10,117	0/1:33,0:30:75.70:76,0,265	0/0:15,0:14:8.05:0,8,154	0/1:32,0:28:99:109,0,217	0/1:9,0:7:9.91:18,0,10	0/0:18,0:18:5.39:0,5,241	0/0:18,0:18:19.03:0,19,175	0/1:16,0:15:6.45:6,0,81	1/1:12,1:13:13.86:126,14,0	1/1:17,3:23:33.86:382,34,0	1/1:19,0:18:1.96:270,2,0	0/1:13,0:12:27.65:58,0,28	0/1:17,0:16:57.17:57,0,153	0/1:12,0:11:33.42:33,0,37	0/0:49,3:37:25.87:0,26,232	1/1:2,5:7:3.01:53,3,0	0/0:3,0:3:3.01:0,3,45	0/0:20,0:20:23.69:0,24,231	0/0:12,0:12:16.01:0,16,86	0/1:25,0:24:99:195,0,165	0/1:19,0:16:46.37:46,0,56	0/0:3,0:1:3.01:0,3,36
chr10	40001991	.	TCTGTCTGTCTGTCTGC	T	961.75	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=-0.134;DP=481;FS=2.762;HRun=0;HaplotypeScore=213.7147;InbreedingCoeff=0.5421;MQ=39.00;MQ0=36;MQRankSum=-1.449;QD=10.12;ReadPosRankSum=-3.024;VQSLOD=2.4546;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:56.69:0,57,2166	0/1:6,0:5:6.92:7,0,17	0/0:4,0:3:8.99:0,9,157	0/0:12,0:2:6.02:0,6,104	0/0:10,0:9:6.49:0,6,88	1/1:10,1:9:16.27:322,16,0	1/1:23,0:15:4.23:78,4,0	0/0:36,0:33:80.64:0,81,1082	1/1:3,8:10:5.99:81,6,0	0/0:31,0:27:69.64:0,70,1540	0/0:12,0:11:9.16:0,9,291	1/1:14,0:14:22.84:425,23,0	0/0:17,0:17:47.17:0,47,1056	0/0:14,0:14:24.08:0,24,877	0/0:15,0:15:11.18:0,11,144	0/0:24,0:22:37.01:0,37,784	0/0:16,0:15:29.33:0,29,937	0/0:14,0:13:32.09:0,32,688	0/0:16,0:16:35.34:0,35,684	0/0:11,0:11:14.98:0,15,345	0/0:57,0:45:45.71:0,46,1020	0/0:6,0:6:6.02:0,6,199	1/1:5,0:4:2.04:6,2,0	0/1:19,0:19:15.03:189,0,15	0/0:10,0:10:21.06:0,21,584	0/0:21,0:20:54.32:0,54,911	0/0:24,0:21:21.43:0,21,828	0/1:6,0:4:12.11:12,0,21
chr10	40002002	.	G	GTC	226.23	PASS	AB=0.968;AC=11;AF=0.204;AN=54;BaseQRankSum=5.815;DP=470;FS=6.307;HRun=0;HaplotypeScore=142.3892;InbreedingCoeff=0.0302;MQ=40.73;MQ0=23;MQRankSum=-4.416;QD=1.45;ReadPosRankSum=-2.201;VQSLOD=1.7801;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:62.98:0,63,757	1/1:6,0:5:9.02:99,9,0	0/0:7,0:4:11.97:0,12,146	0/0:18,0:7:18.05:0,18,226	0/1:12,0:10:5.89:6,0,26	0/1:7,1:6:0.20:0,0,150	0/1:22,3:17:2.34:2,0,50	0/0:28,0:27:75.10:0,75,911	0/1:14,0:13:4.49:4,0,121	0/1:29,0:27:17.42:17,0,573	0/0:12,0:11:5.78:0,6,77	0/1:13,1:14:78.31:109,0,78	0/0:15,0:15:39.99:0,40,499	0/0:15,0:15:36.10:0,36,474	0/1:14,0:14:6.15:6,0,38	0/0:19,0:19:29.40:0,29,316	0/1:12,0:12:75.79:76,0,201	0/0:18,0:17:24.99:0,25,331	0/0:15,0:15:44.83:0,45,485	0/0:14,0:14:27.07:0,27,336	0/0:50,0:44:35.57:0,36,437	0/0:8,0:8:6.02:0,6,69	./.	0/1:22,0:22:6.38:38,0,6	0/0:10,0:10:24.08:0,24,309	0/0:21,0:21:52.35:0,52,627	0/0:22,0:22:44.73:0,45,570	0/0:6,0:5:8.95:0,9,83
chr10	40002005	.	TGC	T	245.83	PASS	AB=0.944;AC=9;AF=0.167;AN=54;BaseQRankSum=5.543;DP=476;FS=0.914;HRun=0;HaplotypeScore=138.7237;InbreedingCoeff=0.0634;MQ=41.31;MQ0=22;MQRankSum=-4.626;QD=1.91;ReadPosRankSum=-1.098;VQSLOD=2.5481;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:69.21:0,69,1280	1/1:3,3:5:9.02:128,9,0	0/0:9,0:5:15.05:0,15,271	0/0:21,0:8:21.07:0,21,376	0/0:12,0:10:5.50:0,6,42	0/1:7,0:6:0.34:0,0,67	0/1:26,0:18:15.36:15,0,48	0/0:28,0:27:74.60:0,75,702	0/1:15,0:14:2.56:3,0,82	0/1:25,2:25:40.57:41,0,508	0/0:11,0:10:6.49:0,6,76	0/1:12,1:13:46.24:78,0,46	0/0:16,0:16:43.02:0,43,740	0/0:18,0:18:48.14:0,48,827	0/0:15,0:15:6.70:0,7,74	0/0:18,0:18:33.94:0,34,520	0/1:8,4:12:99:99,0,404	0/0:19,0:18:32.68:0,33,320	0/0:15,0:15:44.65:0,45,410	0/0:14,0:14:26.74:0,27,230	0/0:48,0:42:41.77:0,42,404	0/0:8,0:8:6.02:0,6,119	./.	0/1:23,0:23:8.32:8,0,10	0/0:10,0:10:22.88:0,23,189	0/0:21,0:21:54.64:0,55,502	0/0:22,0:22:44.68:0,45,390	0/0:5,0:4:8.95:0,9,69
chr10	40002020	.	CTGTCT	C	274.18	PASS	AB=0.915;AC=6;AF=0.107;AN=56;BaseQRankSum=4.674;DP=507;FS=0.933;HRun=0;HaplotypeScore=151.8862;InbreedingCoeff=0.1712;MQ=45.60;MQ0=13;MQRankSum=-3.667;QD=4.09;ReadPosRankSum=-0.519;VQSLOD=2.7079;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:95.08:0,95,2838	1/1:3,3:6:14.96:176,15,0	0/0:20,0:9:24.08:0,24,497	0/0:24,0:12:36.12:0,36,881	0/0:10,0:9:6.01:0,6,100	0/1:6,0:6:6.72:7,0,124	0/0:23,0:20:34.15:0,34,451	0/0:27,0:27:73.54:0,74,1096	0/0:15,0:14:24.92:0,25,272	0/1:18,2:19:77.99:78,0,688	0/0:13,0:13:5.99:0,6,177	0/0:12,0:12:6.61:0,7,328	0/0:18,0:18:45.14:0,45,1169	0/0:24,0:24:69.24:0,69,1883	0/0:15,0:15:17.55:0,18,330	0/0:24,0:24:28.48:0,28,708	0/1:8,4:12:99:119,0,613	0/0:17,0:17:22.99:0,23,431	0/0:18,0:17:48.02:0,48,819	0/0:16,0:16:33.09:0,33,489	0/0:48,0:44:42.18:0,42,798	0/0:9,0:9:8.85:0,9,212	0/0:6,0:5:3.01:0,3,57	0/1:23,0:23:17.22:17,0,34	0/0:10,0:10:24.02:0,24,371	0/0:22,0:22:64.75:0,65,1112	0/0:29,0:29:52.29:0,52,613	0/0:4,0:3:6.01:0,6,75
chr10	40002025	.	TCTGC	T	2465.11	PASS	AB=1.000;AC=18;AF=0.321;AN=56;BaseQRankSum=1.667;DP=541;FS=3.641;HRun=0;HaplotypeScore=138.3716;InbreedingCoeff=0.6467;MQ=48.53;MQ0=9;MQRankSum=-1.706;QD=12.58;ReadPosRankSum=3.342;VQSLOD=3.4356;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:60.68:0,61,1375	0/1:3,0:5:12.35:12,0,40	0/0:26,0:15:6.39:0,6,311	0/0:22,0:12:24.07:0,24,467	0/0:10,0:13:5.99:0,6,74	0/0:8,0:8:23.91:0,24,285	0/0:22,0:19:26.96:0,27,505	1/1:16,9:25:26.11:433,26,0	0/0:17,0:16:33.11:0,33,602	0/0:16,0:16:4.94:0,5,186	0/0:10,0:11:3.58:0,4,62	0/0:12,0:12:27.09:0,27,462	0/0:21,0:21:48.12:0,48,1035	0/0:25,0:25:54.19:0,54,1247	0/0:11,0:24:12.02:0,12,154	0/0:13,0:26:17.20:0,17,235	0/1:15,0:17:4.53:5,0,14	0/0:6,0:21:9.92:0,10,151	1/1:12,7:18:21.06:309,21,0	1/1:5,12:17:18.35:340,18,0	1/1:32,17:47:11.39:196,11,0	0/0:8,0:8:0.89:0,1,2	0/0:9,0:8:4.26:0,4,56	0/0:26,0:26:12.01:0,12,181	1/1:8,2:10:6.02:98,6,0	1/1:9,14:23:2.27:573,2,0	1/1:8,20:28:38.70:633,39,0	1/1:2,1:3:3.01:49,3,0
chr10	40002035	.	T	TGCCT	2782.68	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=0.367;DP=558;FS=3.902;HRun=0;HaplotypeScore=144.9156;InbreedingCoeff=0.7925;MQ=58.27;MQ0=3;MQRankSum=-2.719;QD=11.59;ReadPosRankSum=-2.349;VQSLOD=3.0290;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:54.18:0,54,867	1/1:5,0:5:15.04:176,15,0	0/0:28,0:18:24.04:0,24,305	0/0:27,0:20:15.05:0,15,234	1/1:12,0:12:2.99:24,3,0	1/1:9,0:9:12:221,12,0	1/1:23,0:21:26.90:567,27,0	0/0:23,0:23:23.78:0,24,224	1/1:17,0:16:30.09:668,30,0	1/1:17,0:17:13.27:147,13,0	1/1:12,0:12:3:52,3,0	1/1:14,0:14:27.05:586,27,0	0/0:20,0:20:42.12:0,42,618	0/0:26,0:26:51.16:0,51,791	1/1:24,0:24:6.95:69,7,0	1/1:23,0:23:3.90:54,4,0	1/1:21,0:21:12.90:159,13,0	1/1:19,0:19:6.02:111,6,0	0/0:18,0:18:17.08:0,17,155	0/0:25,0:25:19.43:0,19,193	0/0:47,0:45:11.34:0,11,111	0/1:9,0:9:0:0,0,0	1/1:9,0:8:3.90:67,4,0	1/1:9,16:26:8.99:86,9,0	0/0:12,0:12:6.48:0,6,57	0/0:23,0:24:36.04:0,36,344	0/0:27,0:28:39.03:0,39,363	0/0:2,0:2:3:0,3,28
chr10	40003000	.	GT	G	6537.99	PASS	AB=0.689;AC=45;AF=0.804;AN=56;BaseQRankSum=-1.506;DP=424;FS=16.818;HRun=11;HaplotypeScore=50.7283;InbreedingCoeff=0.6957;MQ=70.17;MQ0=2;MQRankSum=-0.312;QD=17.62;ReadPosRankSum=3.624;VQSLOD=4.1587;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:45.06:0,45,460	1/1:1,7:8:20.96:172,21,0	0/1:14,1:14:6.61:7,0,137	0/0:8,0:7:11.04:0,11,94	1/1:5,13:18:12.97:309,13,0	1/1:2,22:24:59.92:492,60,0	0/1:1,8:9:1.13:170,0,1	1/1:7,29:37:56.30:647,56,0	1/1:3,6:9:17.97:148,18,0	1/1:2,18:20:47.20:390,47,0	1/1:0,14:13:35.95:296,36,0	1/1:1,9:10:20.97:172,21,0	0/0:9,0:9:20.97:0,21,199	0/0:18,0:18:47.95:0,48,453	1/1:3,11:14:29.96:246,30,0	1/1:3,14:17:32.96:271,33,0	1/1:4,21:25:53.93:443,54,0	1/1:1,9:12:28.03:209,28,0	1/1:3,8:11:23.96:197,24,0	1/1:3,14:18:43.97:351,44,0	1/1:8,9:17:29.88:235,30,0	0/1:2,4:6:15.18:86,0,15	1/1:2,11:13:13.62:252,14,0	1/1:0,15:15:38.96:320,39,0	1/1:5,12:18:37.97:301,38,0	1/1:3,15:18:44.92:369,45,0	1/1:2,14:16:10.09:288,10,0	1/1:1,6:7:20.95:167,21,0
chr10	40003056	.	TTGTGTGTGTGTGTGTGTGTG	T	93.79	PASS	AC=6;AF=0.115;AN=52;BaseQRankSum=0.474;DP=436;FS=0.000;HRun=0;HaplotypeScore=200.0533;InbreedingCoeff=0.5063;MQ=54.09;MQ0=19;MQRankSum=-0.210;QD=1.91;ReadPosRankSum=-0.101;VQSLOD=2.5294;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:21:4.17:20,4,0	0/0:8,0:8:9.03:0,9,553	./.	./.	0/0:14,0:13:21.07:0,21,1300	0/0:21,0:18:13.29:0,13,663	0/0:16,0:16:15.05:0,15,625	0/0:21,0:20:15.52:0,16,377	0/0:11,0:11:9.03:0,9,292	0/0:16,0:15:9.92:0,10,644	0/0:10,0:10:6:0,6,266	0/0:11,0:11:6.02:0,6,147	1/1:9,5:14:3.01:158,3,0	1/1:14,0:13:2.98:21,3,0	0/0:10,0:10:6.45:0,6,422	0/0:19,0:19:12.51:0,13,892	0/0:27,0:26:37.68:0,38,2439	0/0:13,0:12:24.04:0,24,1414	0/0:11,0:11:11.07:0,11,676	0/0:12,0:11:9.03:0,9,530	0/0:31,0:30:45.15:0,45,2440	0/0:10,0:10:6.02:0,6,467	0/0:10,0:10:2.99:0,3,24	0/0:18,0:16:15.05:0,15,596	0/0:9,0:7:9.03:0,9,461	0/0:10,0:10:15.04:0,15,908	0/0:14,0:12:15.05:0,15,858	0/0:7,0:7:9.03:0,9,605
chr10	40004580	.	C	CA	4763	PASS	AB=0.781;AC=24;AF=0.429;AN=56;BaseQRankSum=-9.008;DP=530;FS=0.771;HRun=10;HaplotypeScore=56.0615;InbreedingCoeff=0.8290;MQ=67.96;MQ0=0;MQRankSum=1.848;QD=19.93;ReadPosRankSum=-0.366;VQSLOD=5.4686;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,16:19:39.10:416,39,0	1/1:2,10:12:24.02:244,24,0	0/1:10,0:9:21.62:55,0,22	0/0:7,0:7:5.68:0,6,48	1/1:10,18:28:7.86:494,8,0	0/0:18,0:18:44.94:0,45,369	0/0:11,0:11:20.95:0,21,172	0/0:25,0:25:62.90:0,63,516	0/0:24,0:24:56.91:0,57,468	1/1:7,23:31:69.02:709,69,0	0/1:4,14:18:7.19:333,0,7	0/0:21,0:21:48.80:0,49,396	1/1:4,21:25:20.50:424,20,0	1/1:2,14:17:38.93:398,39,0	1/1:0,16:16:39.04:416,39,0	1/1:3,17:21:47.91:482,48,0	1/1:3,17:20:33.97:354,34,0	1/1:3,8:11:12.01:119,12,0	0/0:14,0:14:20.94:0,21,172	0/0:29,0:30:73.92:0,74,594	0/0:17,0:16:44.94:0,45,369	1/1:1,10:11:30.08:320,30,0	0/0:21,0:22:58.95:0,59,474	0/0:5,0:5:11.98:0,12,98	0/0:18,1:20:17.97:0,18,340	0/0:35,0:36:62.44:0,62,669	0/0:28,0:28:82.93:0,83,670	0/0:12,0:12:32.96:0,33,271
chr10	40004656	.	T	TA	1607.38	PASS	AB=0.979;AC=16;AF=0.286;AN=56;BaseQRankSum=5.340;DP=575;FS=3.646;HRun=10;HaplotypeScore=102.6637;InbreedingCoeff=0.6191;MQ=70.22;MQ0=3;MQRankSum=-7.070;QD=9.13;ReadPosRankSum=-2.085;VQSLOD=2.3428;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:20:33.88:0,34,331	0/0:13,0:13:25.67:0,26,170	0/0:38,0:17:20.74:0,21,150	0/1:26,0:15:7.13:7,0,28	0/0:27,0:27:66.28:0,66,528	1/1:5,10:15:33.01:324,33,0	1/1:7,2:9:11.44:132,11,0	0/0:23,1:24:3.50:0,3,221	1/1:7,7:14:25.92:258,26,0	0/1:24,1:26:7.66:8,0,274	0/0:28,0:28:71:0,71,484	1/1:7,13:20:48.12:507,48,0	0/0:20,0:20:50.75:0,51,400	0/0:15,0:15:32.34:0,32,262	0/0:13,0:13:23:0,23,178	0/0:22,0:22:53.82:0,54,429	0/0:28,0:28:64.47:0,64,498	0/0:16,0:16:5.21:0,5,148	0/1:22,0:22:2.48:2,0,293	0/0:37,0:37:91.28:0,91,620	0/0:17,0:16:35.52:0,36,234	0/0:16,1:17:6.87:0,7,263	1/1:5,13:18:44.99:455,45,0	1/1:3,2:5:8.96:81,9,0	0/0:26,0:26:47.25:0,47,320	0/1:19,1:20:16.96:17,0,212	0/0:28,0:28:30.21:0,30,186	0/0:10,0:10:8.27:0,8,47
chr10	40004667	.	C	CA	4857.69	PASS	AB=0.791;AC=36;AF=0.643;AN=56;BaseQRankSum=-3.480;DP=599;FS=0.000;HRun=12;HaplotypeScore=85.9462;InbreedingCoeff=0.7346;MQ=69.21;MQ0=3;MQRankSum=0.062;QD=11.88;ReadPosRankSum=-0.558;VQSLOD=4.4511;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:22:36.24:0,36,141	1/1:5,6:11:18.03:175,18,0	0/0:35,0:16:9.57:0,10,77	0/1:31,0:17:2.50:3,0,20	0/0:27,0:27:59.53:0,60,433	1/1:6,0:21:28.68:132,29,0	1/1:5,0:7:6.62:30,7,0	1/1:12,15:28:23.67:341,24,0	0/1:7,1:19:4.69:36,0,5	1/1:12,8:22:41.73:373,42,0	1/1:15,13:30:12.73:467,13,0	1/1:18,0:18:32.52:155,33,0	0/0:8,0:22:36.36:0,36,119	0/0:10,0:18:26.96:0,27,91	0/1:15,0:15:0.17:0,0,152	0/0:19,0:21:45.72:0,46,312	0/0:25,1:27:29.46:0,29,368	1/1:12,3:15:17.76:152,18,0	1/1:5,17:23:56.88:517,57,0	1/1:10,31:42:91.26:804,91,0	1/1:1,13:16:32.73:291,33,0	0/0:16,0:17:17:0,17,269	1/1:20,0:20:41.02:178,41,0	1/1:4,0:5:9.79:40,10,0	1/1:3,22:26:26.01:401,26,0	0/1:6,14:21:17.75:294,0,18	1/1:7,25:32:41.77:396,42,0	1/1:1,4:6:8.85:73,9,0
chr10	40004671	.	A	AAAC	2265.02	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=3.297;DP=592;FS=0.000;HRun=0;HaplotypeScore=114.1120;InbreedingCoeff=0.5419;MQ=69.33;MQ0=3;MQRankSum=-7.488;QD=26.03;ReadPosRankSum=1.138;VQSLOD=3.7648;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:60.12:0,60,661	0/0:11,0:11:23.31:0,23,141	0/0:36,0:16:35.61:0,36,354	0/0:32,0:17:14.30:0,14,132	0/0:25,0:25:72.10:0,72,1080	0/1:21,0:21:25.34:206,0,25	0/1:6,0:6:37.07:67,0,37	0/0:26,0:26:45.04:0,45,310	0/1:17,0:17:57.14:57,0,72	0/0:22,0:22:43.15:0,43,310	0/0:30,0:30:72.13:0,72,586	1/1:6,11:17:51.15:897,51,0	0/0:22,0:22:63.12:0,63,686	0/0:19,0:19:57.07:0,57,587	0/0:14,0:14:38.97:0,39,523	0/0:22,0:22:60.12:0,60,856	0/0:25,0:25:69.01:0,69,999	0/0:16,0:16:31.61:0,32,205	0/0:22,0:22:56.96:0,57,336	0/0:42,0:42:99:0,103,650	0/0:16,0:16:3.76:0,4,139	0/0:16,0:16:48.05:0,48,739	1/1:9,12:21:59.91:963,60,0	1/1:2,3:5:12.04:231,12,0	0/0:26,0:26:49.30:0,49,311	0/0:21,0:21:56.90:0,57,458	0/0:32,0:32:53.51:0,54,324	0/0:6,0:6:5.44:0,5,31
chr10	40005476	.	ATTCTTTTTTT	A	2221.24	PASS	AB=1.000;AC=27;AF=0.482;AN=56;BaseQRankSum=5.676;DP=421;FS=1.679;HRun=0;HaplotypeScore=123.9886;InbreedingCoeff=0.6339;MQ=67.42;MQ0=7;MQRankSum=-4.468;QD=12.77;ReadPosRankSum=1.494;VQSLOD=2.6747;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:22.06:0,22,544	0/1:8,0:7:10.20:101,0,10	0/0:30,0:15:6.86:0,7,115	0/0:23,0:9:2.22:0,2,182	0/1:18,0:18:15.16:130,0,15	1/1:6,6:11:9.03:227,9,0	1/1:6,1:9:22.34:446,22,0	0/0:33,0:33:84.05:0,84,1920	1/1:4,0:4:9.03:227,9,0	1/1:16,0:16:36.93:305,37,0	1/1:14,0:15:9.45:169,9,0	1/1:6,11:17:9.50:196,10,0	0/0:7,0:7:18.05:0,18,677	0/0:13,0:13:27.06:0,27,775	1/1:11,0:11:4.04:61,4,0	0/1:12,0:12:4.20:45,0,4	1/1:19,0:19:3.35:16,3,0	1/1:13,0:13:5.95:74,6,0	0/0:22,0:21:50.80:0,51,1283	0/0:18,0:18:41.91:0,42,1310	0/0:7,0:7:12.02:0,12,331	1/1:4,0:4:5.23:67,5,0	1/1:0,7:7:10.29:237,10,0	1/1:4,5:9:6.02:118,6,0	0/0:17,0:17:35.37:0,35,1007	0/0:29,0:29:42.53:0,43,1585	0/0:19,0:19:17.99:0,18,433	0/0:14,0:14:9:0,9,297
chr10	40005479	.	C	CTT	2573.02	PASS	AB=0.881;AC=24;AF=0.429;AN=56;BaseQRankSum=-0.162;DP=420;FS=6.514;HRun=9;HaplotypeScore=76.1724;InbreedingCoeff=0.6650;MQ=64.66;MQ0=10;MQRankSum=-6.595;QD=16.08;ReadPosRankSum=-1.943;VQSLOD=1.3410;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:3.22:0,3,214	1/1:8,0:7:20.99:225,21,0	0/0:27,0:12:19.58:0,20,144	0/0:24,0:9:10.88:0,11,84	1/1:17,0:17:39.57:517,40,0	0/0:9,0:9:0.50:0,1,19	0/1:8,0:9:3.09:26,0,3	0/0:33,0:33:62.41:0,62,738	0/1:2,0:4:2.95:3,0,6	1/1:15,1:16:33.08:492,33,0	1/1:15,0:15:40.63:515,41,0	0/1:18,0:16:1.05:1,0,46	0/0:8,0:8:21.05:0,21,220	0/0:18,0:18:7.70:0,8,236	1/1:9,1:10:21.04:253,21,0	1/1:10,0:10:21.05:280,21,0	1/1:4,15:19:3.90:48,4,0	1/1:13,0:13:27.03:345,27,0	0/0:23,0:22:52.68:0,53,518	0/0:17,0:17:38.78:0,39,323	0/0:8,0:7:12.03:0,12,125	1/1:4,0:4:1.74:32,2,0	1/1:7,0:7:8.63:27,9,0	0/1:9,0:9:0.52:1,0,7	0/0:16,0:17:5.89:0,6,251	0/0:28,0:28:48.35:0,48,431	0/0:15,0:15:17.93:0,18,155	0/0:14,0:14:6.85:0,7,58
chr10	40005480	.	TTTTTTTTTC	T	4128.82	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=0.947;DP=421;FS=14.176;HRun=0;HaplotypeScore=108.6827;InbreedingCoeff=0.8688;MQ=63.38;MQ0=10;MQRankSum=-5.860;QD=24.58;ReadPosRankSum=1.365;VQSLOD=2.3173;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:18.27:0,18,630	1/1:8,0:7:18.95:313,19,0	0/0:27,0:12:7.29:0,7,148	0/0:23,0:8:4.81:0,5,163	1/1:16,1:17:35.06:531,35,0	1/1:9,1:9:9.03:175,9,0	1/1:7,2:9:21.04:254,21,0	0/0:34,0:34:93.15:0,93,1974	1/1:5,0:4:9.02:170,9,0	1/1:14,2:16:41.01:743,41,0	1/1:15,0:15:41.06:583,41,0	1/1:18,0:16:5.61:157,6,0	0/0:8,0:8:21.07:0,21,733	0/0:18,0:18:30.09:0,30,807	1/1:9,0:9:21.01:237,21,0	1/1:10,0:10:20.99:256,21,0	1/1:19,0:19:3.90:48,4,0	1/1:12,0:12:27.04:359,27,0	0/0:23,0:22:57.08:0,57,1340	0/0:17,0:17:41.96:0,42,1115	0/0:7,0:6:12.04:0,12,315	1/1:4,0:4:8.51:94,9,0	1/1:7,0:7:10.27:140,10,0	1/1:7,2:9:4.83:70,5,0	0/0:17,0:17:40.62:0,41,1047	0/0:31,0:31:57.51:0,58,1638	0/0:16,0:16:21.02:0,21,408	0/0:14,0:14:8.95:0,9,258
chr10	40005488	.	TC	T	2142.53	PASS	AB=0.974;AC=27;AF=0.482;AN=56;BaseQRankSum=6.249;DP=432;FS=3.942;HRun=1;HaplotypeScore=67.8598;InbreedingCoeff=0.4663;MQ=57.48;MQ0=18;MQRankSum=-10.050;QD=9.04;ReadPosRankSum=-3.387;VQSLOD=-0.0190;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:18.83:0,19,238	1/1:5,4:8:23.88:196,24,0	0/0:25,0:8:4.03:0,4,79	0/1:23,0:7:7.74:8,0,26	1/1:21,1:22:59.21:392,59,0	0/1:12,0:10:5.98:38,0,6	1/1:12,0:10:7.42:102,7,0	0/0:34,0:33:50.23:0,50,438	0/1:6,1:5:12.92:54,0,13	1/1:19,0:19:51.94:363,52,0	1/1:17,1:18:52.69:363,53,0	0/1:16,1:15:8.20:41,0,8	0/0:9,0:9:23.85:0,24,219	0/0:18,0:18:10.46:0,10,245	1/1:11,1:12:18.45:134,18,0	1/1:8,1:9:24.70:170,25,0	1/1:16,0:16:11.91:77,12,0	1/1:13,0:13:37.98:257,38,0	0/0:22,0:21:24.20:0,24,211	0/0:17,0:17:28.32:0,28,192	0/0:7,0:6:11.58:0,12,90	1/1:3,1:4:8.46:62,8,0	0/1:9,0:9:4.71:47,0,5	0/1:10,0:10:11.69:26,0,12	0/0:16,0:15:17.82:0,18,131	0/1:25,0:25:8.81:9,0,149	0/0:15,0:15:0.41:0,0,81	0/0:11,0:11:8.38:0,8,46
chr10	40005489	.	C	CT	2535.22	PASS	AB=0.940;AC=32;AF=0.571;AN=56;BaseQRankSum=-3.700;DP=453;FS=1.323;HRun=10;HaplotypeScore=81.3201;InbreedingCoeff=0.4483;MQ=55.01;MQ0=19;MQRankSum=3.070;QD=7.75;ReadPosRankSum=-2.352;VQSLOD=1.7651;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:9.97:0,10,107	0/0:9,0:8:2.01:0,2,8	0/0:24,0:7:4.15:0,4,17	0/1:22,0:7:6.53:12,0,7	1/1:26,0:26:13.64:70,14,0	0/0:13,0:11:6.50:0,6,34	0/1:12,0:10:14.09:14,0,28	1/1:12,22:33:40.93:545,41,0	0/0:9,0:7:7.02:0,7,34	0/1:24,0:23:4.92:47,0,5	1/1:19,1:20:1.13:42,1,0	1/1:19,0:17:3.25:21,3,0	0/0:9,0:9:19.97:0,20,138	0/0:19,0:19:16.37:0,16,132	1/1:13,0:13:3.94:28,4,0	0/1:9,0:9:0:0,0,0	1/1:16,0:16:9.05:34,9,0	1/1:14,0:14:7.04:33,7,0	1/1:5,18:22:29.45:498,29,0	1/1:2,14:16:13.48:355,13,0	0/1:4,5:8:17.99:26,0,18	0/1:5,0:5:0.50:24,0,1	0/0:10,0:10:3.72:0,4,26	0/0:12,0:12:6.75:0,7,38	1/1:14,1:14:31.70:287,32,0	1/1:4,20:24:31.76:458,32,0	1/1:1,12:14:15.03:156,15,0	1/1:2,9:11:8.56:61,9,0
chr10	40005494	.	TTTTTTC	T	2108.79	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=5.260;DP=469;FS=2.015;HRun=0;HaplotypeScore=103.8194;InbreedingCoeff=0.0309;MQ=53.30;MQ0=19;MQRankSum=-3.387;QD=6.06;ReadPosRankSum=-2.275;VQSLOD=1.9893;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:9.93:0,10,287	1/1:6,4:9:23.90:245,24,0	0/0:24,0:6:1.12:0,1,9	0/1:22,0:6:33.76:34,0,50	1/1:26,1:27:25.80:279,26,0	0/1:13,0:11:43.20:88,0,43	0/1:15,0:13:99:125,0,135	0/1:30,0:29:22.16:22,0,776	0/1:9,0:7:74.68:98,0,75	1/1:23,0:22:30.88:336,31,0	1/1:21,1:22:34.16:313,34,0	0/1:22,0:20:8.60:120,0,9	0/0:9,0:9:20.96:0,21,433	0/0:19,0:19:16.43:0,16,292	1/1:12,0:12:3.32:55,3,0	1/1:8,0:8:21.29:151,21,0	1/1:17,0:17:3.18:60,3,0	1/1:14,0:14:28.57:171,29,0	0/1:24,0:23:25.57:26,0,503	0/1:17,0:17:21.39:21,0,491	0/0:8,0:7:5.91:0,6,155	0/1:5,0:5:1.42:67,0,1	0/1:12,0:12:53.62:54,0,97	0/1:13,0:12:9.80:10,0,129	0/1:20,0:19:0.02:0,0,515	0/0:24,0:24:0.18:0,0,738	0/0:16,0:16:20.98:0,21,358	0/1:13,0:13:5.81:6,0,171
chr10	40006121	.	A	ATTCAT	14355.73	PASS	AB=0.708;AC=27;AF=0.482;AN=56;BaseQRankSum=-6.223;DP=443;FS=6.010;HRun=0;HaplotypeScore=71.1067;InbreedingCoeff=0.7717;MQ=67.96;MQ0=0;MQRankSum=-6.396;QD=58.59;ReadPosRankSum=-0.228;VQSLOD=5.0994;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:84.27:0,84,1768	0/0:10,0:10:30.08:0,30,615	0/0:9,0:6:13.86:0,14,236	0/0:11,0:9:10.72:0,11,218	0/0:26,0:26:78.27:0,78,1719	1/1:1,0:21:36.12:890,36,0	1/1:0,0:10:24.08:619,24,0	1/1:4,28:34:99:2741,102,0	1/1:0,0:10:15.05:361,15,0	0/0:19,0:19:54.19:0,54,1173	0/0:12,0:12:36.12:0,36,769	1/1:0,0:12:12.04:286,12,0	0/0:13,0:13:39.12:0,39,785	0/0:11,0:11:33.11:0,33,728	0/0:18,0:18:54.16:0,54,1114	0/0:15,0:15:45.14:0,45,919	0/0:25,0:25:75.24:0,75,1594	0/1:14,0:14:12.74:13,0,749	1/1:0,12:13:39.13:1150,39,0	1/1:3,14:18:48.16:1429,48,0	1/1:1,10:14:18.06:463,18,0	0/0:1,0:1:3.01:0,3,67	1/1:2,0:8:9.03:217,9,0	0/1:2,0:6:99:130,0,122	1/1:5,19:24:54.18:1605,54,0	0/1:2,20:23:0.74:1849,0,1	1/1:3,22:26:66.23:2120,66,0	1/1:0,8:10:15.05:484,15,0
chr10	40006813	.	C	CT	196.46	PASS	AB=1.000;AC=12;AF=0.214;AN=56;BaseQRankSum=2.662;DP=364;FS=15.559;HRun=0;HaplotypeScore=80.8503;InbreedingCoeff=-0.1622;MQ=83.09;MQ0=14;MQRankSum=1.114;QD=1.58;ReadPosRankSum=0.347;VQSLOD=0.4219;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:8:11.96:0,12,93	0/1:4,0:3:13.89:16,0,14	0/0:39,0:20:36.14:0,36,328	0/0:62,0:34:29.01:0,29,364	0/1:15,0:14:35.44:61,0,35	0/0:10,0:10:8.47:0,8,64	0/0:20,0:20:31.04:0,31,266	0/1:18,0:18:31.13:31,0,155	0/0:6,0:5:8.65:0,9,71	0/1:16,0:15:12.71:13,0,59	1/1:8,0:8:2.54:17,3,0	0/0:8,0:7:10.86:0,11,82	0/0:4,0:3:7.24:0,7,54	0/0:7,0:7:15.41:0,15,123	0/0:7,6:13:2.88:0,3,27	0/0:9,0:9:21.84:0,22,174	0/0:18,0:17:18.87:0,19,114	0/1:7,0:7:0.53:1,0,54	0/0:9,0:6:5.81:0,6,50	0/1:8,0:8:22.89:23,0,31	0/1:13,0:12:28.97:78,0,29	0/1:13,0:13:8.21:33,0,8	0/0:3,0:3:3:0,3,27	0/0:11,0:10:0.84:0,1,98	0/0:10,0:10:6.66:0,7,48	0/1:8,0:8:31.62:50,0,32	0/1:14,0:13:9.95:10,0,74	0/0:1,0:1:2.97:0,3,20
chr10	40006815	.	C	CCT	1742.96	PASS	AB=0.865;AC=31;AF=0.620;AN=50;BaseQRankSum=1.889;DP=368;FS=6.702;HRun=0;HaplotypeScore=95.5919;InbreedingCoeff=0.5539;MQ=83.66;MQ0=14;MQRankSum=0.770;QD=7.06;ReadPosRankSum=-2.812;VQSLOD=1.9538;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:8.84:0,9,68	1/1:5,0:4:5.99:50,6,0	0/0:38,0:19:4.89:0,5,63	0/1:61,0:35:33.14:33,0,72	1/1:15,0:14:17.99:164,18,0	0/0:9,0:9:5.65:0,6,45	0/0:18,0:18:5.81:0,6,56	1/1:19,0:19:21.87:198,22,0	0/0:10,0:9:8.98:0,9,74	1/1:14,0:13:20.91:170,21,0	1/1:7,0:7:8.99:74,9,0	./.	./.	0/0:7,0:7:11.78:0,12,86	1/1:14,0:14:11.99:100,12,0	0/1:8,0:8:10.54:72,0,11	1/1:7,0:17:8.97:73,9,0	0/1:4,3:11:5.83:17,0,6	1/1:7,0:4:9.01:83,9,0	1/1:2,0:9:5.90:37,6,0	1/1:13,0:12:15.62:150,16,0	1/1:12,0:12:17.97:146,18,0	0/0:4,0:4:2.77:0,3,26	0/0:10,0:9:4.81:0,5,29	1/1:11,0:11:20.97:174,21,0	1/1:9,0:9:18.50:173,18,0	1/1:13,0:12:23.96:201,24,0	./.
chr10	40008419	.	G	GA	6456.60	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-13.298;DP=494;FS=6.265;HRun=9;HaplotypeScore=48.4874;InbreedingCoeff=0.9375;MQ=73.25;MQ0=0;MQRankSum=1.973;QD=24.83;ReadPosRankSum=1.056;VQSLOD=5.5870;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:62.99:0,63,547	0/0:8,0:8:17.98:0,18,156	0/0:10,0:10:14.98:0,15,130	0/0:11,0:11:9.87:0,10,87	0/0:28,0:28:74.95:0,75,647	1/1:4,23:27:57.15:631,57,0	1/1:1,11:12:33.09:365,33,0	1/1:5,14:19:42.11:465,42,0	1/1:4,12:16:33.09:365,33,0	0/0:12,0:12:29.99:0,30,259	0/0:21,0:21:56.97:0,57,491	1/1:2,20:22:54.15:597,54,0	0/0:13,0:13:35.98:0,36,313	0/0:21,0:21:56.90:0,57,484	0/0:23,0:23:62.96:0,63,543	0/0:17,1:18:14.81:0,15,358	0/0:14,0:14:38.99:0,39,339	0/0:20,0:20:50.99:0,51,443	1/1:2,10:13:32.92:346,33,0	1/1:8,19:27:34.08:592,34,0	1/1:1,8:9:1.02:239,1,0	0/0:14,0:14:41.98:0,42,361	1/1:1,15:18:47.80:493,48,0	1/1:1,9:10:27.07:299,27,0	1/1:2,17:19:42.11:465,42,0	1/1:9,16:25:10.03:534,10,0	1/1:7,25:32:49.13:761,49,0	1/1:1,10:11:7.03:306,7,0
chr10	40008534	.	CT	C	5056.85	PASS	AB=0.740;AC=46;AF=0.821;AN=56;BaseQRankSum=-2.081;DP=518;FS=4.464;HRun=13;HaplotypeScore=81.0281;InbreedingCoeff=0.7274;MQ=68.90;MQ0=0;MQRankSum=-0.436;QD=11.26;ReadPosRankSum=4.385;VQSLOD=4.8283;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:20:20.46:0,20,109	1/1:0,6:8:21.97:143,22,0	0/1:10,2:7:9.28:9,0,41	0/0:8,0:9:10.48:0,10,136	1/1:10,18:28:41.64:306,42,0	1/1:5,20:25:33.43:409,33,0	1/1:3,7:12:24.94:165,25,0	1/1:11,14:25:40.70:286,41,0	1/1:3,12:16:34.85:247,35,0	1/1:9,9:18:20.78:153,21,0	1/1:7,11:21:32.88:215,33,0	1/1:6,0:24:30.14:97,30,0	0/0:5,0:22:20.35:0,20,119	0/0:4,0:18:11.48:0,11,62	1/1:2,25:27:33.46:408,33,0	1/1:2,14:18:5.86:143,6,0	1/1:6,12:18:29.78:219,30,0	1/1:5,11:16:17.82:131,18,0	1/1:4,7:12:19.89:135,20,0	1/1:10,16:27:40.75:290,41,0	1/1:2,13:16:37.82:269,38,0	1/1:2,10:12:29.80:219,30,0	1/1:4,0:26:45.19:131,45,0	1/1:1,0:6:8.12:23,8,0	1/1:3,19:22:50.68:372,51,0	0/1:11,17:28:4.69:295,0,5	1/1:5,20:26:20.52:305,21,0	1/1:1,4:5:11.90:88,12,0
chr10	40009374	.	GACAC	G	1039.23	PASS	AB=0.901;AC=21;AF=0.420;AN=50;BaseQRankSum=0.986;DP=379;FS=7.303;HRun=0;HaplotypeScore=73.5479;InbreedingCoeff=0.3602;MQ=59.41;MQ0=10;MQRankSum=-1.100;QD=5.56;ReadPosRankSum=1.968;VQSLOD=0.6384;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:25:19.26:0,19,301	1/1:3,3:6:2.42:45,2,0	./.	./.	./.	0/0:18,0:19:18.06:0,18,338	0/0:23,0:22:17.89:0,18,294	0/0:16,0:14:7.24:0,7,64	0/0:9,0:15:12.02:0,12,167	1/1:10,5:15:15.01:202,15,0	1/1:9,3:12:9.03:138,9,0	0/1:8,1:10:25.59:26,0,294	0/0:7,0:7:12:0,12,196	0/0:5,0:7:3.01:0,3,52	0/0:4,0:4:0:0,0,0	1/1:2,1:3:3.01:46,3,0	1/1:16,11:28:27.08:399,27,0	0/1:18,8:26:10.57:169,0,11	0/1:8,0:7:3.37:3,0,5	0/0:13,0:11:2.88:0,3,15	0/1:16,0:14:22.52:23,0,93	1/1:14,2:16:3.01:46,3,0	0/0:12,0:12:12.51:0,13,275	0/1:25,1:26:7.31:7,0,591	0/0:13,0:20:16.98:0,17,101	1/1:6,1:7:3.01:46,3,0	1/1:12,1:13:3.01:46,3,0	0/0:7,0:10:4.56:0,5,17
chr10	40009593	.	AT	A	3502.17	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=10.871;DP=527;FS=0.863;HRun=3;HaplotypeScore=51.5833;InbreedingCoeff=0.9896;MQ=74.44;MQ0=2;MQRankSum=0.535;QD=28.24;ReadPosRankSum=3.199;VQSLOD=2.7704;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:78.19:0,78,977	0/0:9,0:9:27.04:0,27,312	0/0:15,1:12:25.34:0,25,270	0/0:15,0:9:26.93:0,27,283	0/0:27,0:27:78.22:0,78,1002	1/1:1,29:30:72.23:886,72,0	1/1:0,20:20:42.13:518,42,0	0/0:29,0:29:84.04:0,84,955	1/1:0,13:13:36.11:444,36,0	0/0:18,0:18:54.18:0,54,722	0/0:14,0:14:39.07:0,39,487	1/1:3,16:19:42.07:499,42,0	0/0:20,0:20:57.10:0,57,666	0/0:11,0:11:30.09:0,30,383	0/0:13,0:13:36.10:0,36,465	0/0:15,1:16:10.11:0,10,500	0/0:25,0:25:75.22:0,75,967	0/0:19,0:19:54.16:0,54,705	0/0:15,0:15:39.12:0,39,497	0/0:18,0:18:51.14:0,51,652	0/0:13,0:13:39.11:0,39,505	0/0:12,0:12:33.10:0,33,426	1/1:3,21:24:50.94:566,51,0	1/1:0,18:18:48.15:590,48,0	0/0:20,0:20:57.04:0,57,722	0/0:29,0:28:83.59:0,84,1008	0/0:23,0:23:66.17:0,66,822	0/0:13,0:13:39.11:0,39,505
chr10	40012549	.	A	ATCTGTC	53107.97	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-8.618;DP=759;FS=6.828;HRun=0;HaplotypeScore=156.1237;InbreedingCoeff=0.9985;MQ=69.24;MQ0=0;MQRankSum=-16.507;QD=86.50;ReadPosRankSum=1.285;VQSLOD=6.3400;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,132,3023	1/1:3,10:14:39.13:1372,39,0	0/0:22,0:22:55.07:0,55,1189	0/0:20,0:20:44.73:0,45,879	1/1:3,25:32:72.25:2601,72,0	1/1:8,17:26:66.23:2330,66,0	1/1:7,18:26:69.24:2405,69,0	1/1:18,18:43:99:3855,120,0	1/1:4,22:28:72.25:2629,72,0	1/1:6,21:30:90.31:2938,90,0	1/1:6,17:24:57.20:1996,57,0	1/1:6,25:32:84.29:3056,84,0	0/0:33,0:33:96.33:0,96,2292	0/0:26,0:26:78.25:0,78,1845	1/1:9,23:35:78.27:2804,78,0	1/1:6,27:35:87.30:3176,87,0	1/1:7,15:22:45.15:1571,45,0	1/1:1,7:11:21.07:768,21,0	1/1:5,10:20:60.19:1859,60,0	1/1:3,25:30:81.28:2898,81,0	1/1:9,14:23:45.15:1642,45,0	1/1:8,11:21:42.14:1508,42,0	1/1:11,16:28:51.17:1857,51,0	1/1:6,13:22:39.47:1384,39,0	1/1:6,23:31:81.28:2956,81,0	1/1:4,23:29:87.30:3113,87,0	1/1:11,28:43:99:3513,102,0	1/1:1,8:9:24.08:877,24,0
chr10	40013027	.	GT	G	6955.63	PASS	AB=0.867;AC=53;AF=0.946;AN=56;BaseQRankSum=-4.532;DP=524;FS=2.943;HRun=11;HaplotypeScore=72.5164;InbreedingCoeff=0.5370;MQ=65.98;MQ0=0;MQRankSum=-3.351;QD=13.40;ReadPosRankSum=2.865;VQSLOD=5.2662;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,15:16:35.96:296,36,0	1/1:2,7:9:17.97:148,18,0	0/1:11,2:13:26.49:26,0,116	0/0:5,0:3:6.01:0,6,61	1/1:5,28:33:68.48:566,68,0	1/1:6,16:22:44.92:369,45,0	1/1:3,6:9:17.98:148,18,0	1/1:7,0:30:39.42:116,39,0	1/1:2,9:12:29:228,29,0	1/1:7,19:26:56.92:468,57,0	1/1:1,15:17:46.98:375,47,0	1/1:0,13:14:38:301,38,0	1/1:7,21:28:50.91:419,51,0	1/1:2,10:14:34.03:258,34,0	1/1:3,22:26:64.94:523,65,0	1/1:2,13:15:38.95:320,39,0	1/1:2,14:16:38.94:320,39,0	1/1:3,14:18:43.82:349,44,0	1/1:3,0:15:17.78:52,18,0	1/1:1,1:13:25.40:89,25,0	1/1:2,0:23:42.77:124,43,0	1/1:3,20:23:53.91:443,54,0	1/1:6,12:18:29.42:245,29,0	1/1:1,11:12:32.96:271,33,0	1/1:3,0:21:32.59:94,33,0	1/1:2,1:25:45.77:148,46,0	1/1:5,0:37:65.17:188,65,0	1/1:1,0:13:24.44:71,24,0
chr10	40014447	.	C	CAAAA	5948.32	PASS	AB=0.888;AC=46;AF=0.821;AN=56;BaseQRankSum=1.410;DP=542;FS=0.581;HRun=14;HaplotypeScore=107.3309;InbreedingCoeff=0.5815;MQ=54.67;MQ0=11;MQRankSum=-5.553;QD=12.68;ReadPosRankSum=-4.508;VQSLOD=0.8880;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:29:53.90:0,54,625	1/1:2,6:12:18.53:350,19,0	0/1:12,0:6:12.11:24,0,12	0/0:2,0:2:2.68:0,3,11	1/1:6,8:20:25.09:229,25,0	1/1:7,10:19:9.03:195,9,0	1/1:8,0:12:6.02:80,6,0	1/1:16,0:32:23.80:292,24,0	1/1:16,0:17:29.36:322,29,0	1/1:8,14:25:47.99:647,48,0	1/1:1,12:20:32.46:486,32,0	1/1:7,0:19:3.01:60,3,0	0/0:14,0:17:29.70:0,30,341	0/0:24,0:24:29.13:0,29,351	1/1:5,5:13:9.03:167,9,0	1/1:4,16:25:23.99:407,24,0	1/1:2,10:16:9.97:132,10,0	1/1:3,7:10:3.01:65,3,0	1/1:15,0:23:27.63:211,28,0	1/1:19,0:27:46.73:368,47,0	1/1:7,0:13:20.47:212,20,0	1/1:11,2:12:17.93:287,18,0	1/1:7,1:25:29.94:456,30,0	1/1:5,0:4:8.99:108,9,0	1/1:10,0:25:13.88:98,14,0	1/1:11,0:27:47.17:332,47,0	0/1:27,0:35:68.53:310,0,69	1/1:5,0:9:17.61:107,18,0
chr10	40015598	.	G	GT	4888.39	PASS	AB=0.659;AC=25;AF=0.446;AN=56;BaseQRankSum=1.569;DP=491;FS=1.255;HRun=11;HaplotypeScore=78.6804;InbreedingCoeff=0.6634;MQ=76.05;MQ0=1;MQRankSum=-0.206;QD=17.97;ReadPosRankSum=0.276;VQSLOD=5.6608;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:29.80:0,30,224	0/1:4,1:5:18.48:18,0,58	0/0:18,0:15:19.71:0,20,137	0/0:17,0:14:11.12:0,11,85	0/0:30,0:30:77.69:0,78,603	1/1:4,26:31:51.41:503,51,0	0/1:3,7:10:2.20:162,0,2	1/1:8,20:28:55.30:538,55,0	1/1:3,13:16:30.06:305,30,0	0/0:15,0:15:38.82:0,39,302	0/0:25,0:27:69.82:0,70,522	1/1:2,11:13:20.88:197,21,0	0/0:21,0:23:49.80:0,50,374	0/0:16,0:17:37.87:0,38,284	0/0:14,0:15:40.86:0,41,306	0/0:14,0:14:35.85:0,36,276	0/0:15,1:16:8.38:0,8,248	0/0:7,0:7:20.92:0,21,163	0/1:13,12:25:13.29:338,0,13	1/1:3,17:20:42.93:416,43,0	0/1:2,5:7:5.20:134,0,5	0/0:5,0:5:14.17:0,14,99	1/1:2,20:23:47.93:471,48,0	1/1:2,12:15:12.67:296,13,0	1/1:2,24:26:60.12:609,60,0	1/1:6,18:24:30.87:494,31,0	1/1:6,15:21:14.37:303,14,0	0/1:3,5:8:27.96:104,0,28
chr10	40018067	.	TC	T	6566.23	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=12.435;DP=643;FS=3.268;HRun=3;HaplotypeScore=60.8203;InbreedingCoeff=0.9946;MQ=62.94;MQ0=5;MQRankSum=0.233;QD=33.33;ReadPosRankSum=0.721;VQSLOD=5.2917;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,111,1598	1/1:1,8:9:24.08:298,24,0	0/0:25,0:13:39.13:0,39,550	0/0:21,0:11:33.10:0,33,442	1/1:1,21:22:60.19:744,60,0	0/0:23,0:22:69.23:0,69,994	0/0:20,0:18:54.18:0,54,778	0/0:33,0:31:90.27:0,90,1257	0/0:20,0:20:60.20:0,60,855	1/1:0,22:21:63.20:781,63,0	1/1:3,26:29:69.22:855,69,0	0/0:24,0:24:72.24:0,72,1034	0/0:27,0:27:81.26:0,81,1147	0/0:26,0:26:75.25:0,75,1075	1/1:2,21:23:51.16:632,51,0	1/1:0,29:29:84.26:1042,84,0	1/1:0,38:38:99:1359,111,0	1/1:0,14:14:36.11:446,36,0	0/0:12,0:10:27.07:0,27,370	0/0:25,0:25:72.23:0,72,1006	0/0:23,0:23:69.20:0,69,955	1/1:0,11:11:33.10:409,33,0	0/0:17,0:17:51.17:0,51,719	0/0:20,0:20:57.19:0,57,821	0/0:23,0:23:69.23:0,69,994	0/0:35,1:36:65.13:0,65,1369	0/0:30,0:30:90.30:0,90,1295	0/0:4,0:4:12.04:0,12,173
chr10	40018564	.	GGTGTGTGTGT	G	938.27	PASS	AB=1.000;AC=7;AF=0.135;AN=52;BaseQRankSum=2.085;DP=459;FS=1.086;HRun=0;HaplotypeScore=135.7210;InbreedingCoeff=0.6968;MQ=54.35;MQ0=18;MQRankSum=-4.658;QD=12.68;ReadPosRankSum=0.921;VQSLOD=2.6337;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:14,5:20:12.04:286,12,0	0/0:7,0:8:3.01:0,3,130	./.	./.	0/0:8,0:15:18.06:0,18,744	0/0:18,0:18:9.03:0,9,327	0/0:11,0:11:3.01:0,3,147	0/0:22,0:21:22.89:0,23,909	0/0:17,0:16:6.70:0,7,296	0/0:22,0:22:30.10:0,30,1300	0/1:14,0:15:0:0,0,0	0/0:9,0:13:15.05:0,15,591	1/1:13,8:22:14.41:424,14,0	1/1:11,6:17:12.04:356,12,0	0/0:20,0:20:21.07:0,21,848	0/0:5,0:12:15.51:0,16,567	0/0:15,0:16:19.62:0,20,780	0/0:12,0:13:24.06:0,24,852	0/0:13,0:16:19.62:0,20,749	0/0:16,0:17:9.24:0,9,210	0/0:7,0:11:21.07:0,21,896	0/0:4,0:9:4.90:0,5,136	0/0:14,0:14:24.07:0,24,981	0/0:10,0:15:15.05:0,15,615	0/0:12,0:13:6.02:0,6,174	0/0:13,0:16:24.08:0,24,1080	0/0:18,0:23:21.54:0,22,780	0/0:11,0:11:24.08:0,24,767
chr10	40018582	.	T	TGTGT	2101.59	PASS	AB=1.000;AC=42;AF=0.808;AN=52;BaseQRankSum=-5.051;DP=474;FS=1.149;HRun=0;HaplotypeScore=96.2720;InbreedingCoeff=0.3810;MQ=47.61;MQ0=28;MQRankSum=3.257;QD=5.81;ReadPosRankSum=-1.489;VQSLOD=2.1936;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:22:8.04:0,8,61	1/1:6,0:6:3.01:52,3,0	./.	./.	1/1:21,0:21:6.02:140,6,0	1/1:16,0:15:6.02:120,6,0	1/1:18,0:18:3.46:25,3,0	1/1:23,0:22:10.07:26,10,0	0/1:15,0:13:0.01:0,0,0	1/1:18,0:17:10.85:187,11,0	0/1:18,0:17:0:0,0,0	0/1:15,0:15:16.18:16,0,38	0/0:20,0:19:14.21:0,14,139	0/0:22,0:21:12.01:0,12,112	1/1:17,5:24:6:80,6,0	1/1:15,0:14:9.03:211,9,0	1/1:16,0:16:13.38:188,13,0	1/1:15,0:15:9.19:124,9,0	1/1:10,0:9:13.81:155,14,0	1/1:17,0:16:3.48:53,3,0	1/1:18,0:17:15.05:281,15,0	1/1:11,0:11:2.97:70,3,0	0/1:16,0:16:9.19:34,0,9	1/1:14,0:13:8.23:37,8,0	1/1:13,0:11:3.01:67,3,0	1/1:16,0:16:14.31:190,14,0	1/1:17,0:17:4.83:57,5,0	1/1:10,0:10:9.03:129,9,0
chr10	40019079	.	C	CA	1744.18	PASS	AB=0.571;AC=11;AF=0.196;AN=56;BaseQRankSum=-9.202;DP=476;FS=8.407;HRun=10;HaplotypeScore=49.6183;InbreedingCoeff=0.8631;MQ=62.54;MQ0=2;MQRankSum=0.549;QD=20.28;ReadPosRankSum=2.534;VQSLOD=4.4623;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:36:97.87:0,98,790	0/0:8,0:8:17.98:0,18,148	0/0:11,0:9:24.04:0,24,164	0/0:9,0:8:18.92:0,19,165	0/0:29,1:32:40.98:0,41,518	1/1:0,19:19:54.14:576,54,0	1/1:0,9:10:17.21:218,17,0	0/0:26,0:25:53.86:0,54,433	1/1:2,9:11:24.06:256,24,0	0/0:16,0:18:37:0,37,283	0/0:17,0:17:38.94:0,39,320	1/1:4,11:15:27.07:286,27,0	0/0:16,0:16:41.95:0,42,345	0/0:13,0:13:32.94:0,33,271	0/0:27,0:27:68.91:0,69,567	0/0:18,0:18:44.93:0,45,369	0/0:16,1:19:14.04:0,14,297	0/0:14,0:14:28.41:0,28,219	0/0:14,0:14:35.91:0,36,289	0/0:18,0:20:52.01:0,52,406	0/0:4,0:4:11.97:0,12,95	0/0:15,1:16:6.86:0,7,252	0/1:5,14:20:8.80:298,0,9	1/1:1,10:11:27.07:288,27,0	0/0:19,0:20:58.96:0,59,471	0/0:26,2:28:36:0,36,506	0/0:16,0:17:40.99:0,41,326	0/0:5,0:5:14.98:0,15,123
chr10	40019328	.	AT	A	1471.22	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=9.188;DP=584;FS=0.536;HRun=6;HaplotypeScore=58.4738;InbreedingCoeff=0.8652;MQ=71.80;MQ0=1;MQRankSum=2.372;QD=19.36;ReadPosRankSum=2.178;VQSLOD=3.1691;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,25:25:63.16:677,63,0	0/0:9,0:9:24.08:0,24,315	0/0:22,0:16:20.13:0,20,173	0/1:15,0:13:5.57:6,0,91	0/0:30,0:30:87.24:0,87,1100	0/0:21,0:21:60.20:0,60,789	0/0:18,0:18:54.17:0,54,697	0/0:31,0:31:93.30:0,93,1207	0/0:18,0:18:51.17:0,51,670	0/0:21,0:21:63.20:0,63,829	0/0:24,0:24:63.18:0,63,802	0/0:20,0:20:60.20:0,60,788	1/1:1,18:19:51.13:548,51,0	1/1:0,17:17:36.09:387,36,0	0/0:23,0:23:66.19:0,66,840	0/0:23,0:23:60.19:0,60,776	0/0:26,0:26:75.14:0,75,961	0/0:19,0:19:54.12:0,54,690	0/0:15,0:15:42.13:0,42,540	0/0:37,0:37:99:0,108,1408	0/0:7,0:7:21.07:0,21,276	0/0:16,0:16:42.12:0,42,536	0/0:19,0:19:54.14:0,54,692	0/0:14,0:14:42.14:0,42,553	0/0:21,0:21:57.16:0,57,733	0/0:34,0:34:90.28:0,90,1171	0/0:28,0:27:69.19:0,69,870	0/0:12,0:12:30.10:0,30,395
chr10	40019681	.	CT	C	7487.76	PASS	AB=0.909;AC=50;AF=0.893;AN=56;BaseQRankSum=6.066;DP=647;FS=5.261;HRun=11;HaplotypeScore=88.2681;InbreedingCoeff=0.3117;MQ=73.02;MQ0=1;MQRankSum=-1.627;QD=11.90;ReadPosRankSum=1.718;VQSLOD=4.7904;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:26,7:34:92.34:92,0,539	1/1:1,10:11:29.97:246,30,0	0/1:14,1:15:9.99:10,0,134	0/1:12,0:10:8.01:8,0,86	1/1:7,18:26:34.44:400,34,0	1/1:1,19:21:21:368,21,0	1/1:4,13:17:38.92:318,39,0	1/1:6,0:38:61.50:177,61,0	1/1:4,15:21:46.01:357,46,0	1/1:1,28:29:83.88:684,84,0	1/1:4,21:25:65.87:536,66,0	1/1:6,14:21:37.88:294,38,0	0/1:28,4:33:33.24:33,0,528	0/0:18,0:18:20.47:0,20,413	1/1:4,19:23:24.94:411,25,0	1/1:6,18:24:50.90:419,51,0	1/1:0,26:26:59.93:493,60,0	1/1:1,14:15:38.93:319,39,0	1/1:3,0:17:28.51:82,29,0	1/1:2,0:42:74.92:216,75,0	1/1:4,0:23:35.58:119,36,0	1/1:3,24:27:65.91:542,66,0	1/1:3,21:24:56.93:468,57,0	1/1:0,19:20:55.97:449,56,0	1/1:2,0:18:26.48:76,26,0	1/1:1,1:25:49.85:160,50,0	1/1:1,0:33:59.07:171,59,0	1/1:1,0:8:14.26:41,14,0
chr10	40022455	.	CT	C	1424.93	PASS	AB=0.909;AC=9;AF=0.161;AN=56;BaseQRankSum=7.794;DP=604;FS=6.835;HRun=8;HaplotypeScore=63.9519;InbreedingCoeff=0.9096;MQ=69.45;MQ0=0;MQRankSum=0.524;QD=18.75;ReadPosRankSum=1.800;VQSLOD=3.3819;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,120,1449	1/1:0,5:5:15.02:145,15,0	0/1:9,0:10:1.90:2,0,139	0/0:22,0:21:37.32:0,37,404	0/0:34,0:34:84.20:0,84,975	0/0:23,0:23:63.18:0,63,748	0/0:27,0:27:72.16:0,72,841	0/0:37,0:37:99:0,102,1182	0/0:21,0:21:57.15:0,57,665	1/1:2,25:28:77.13:722,77,0	1/1:5,10:15:26.99:251,27,0	0/0:20,0:20:57.16:0,57,677	0/0:30,0:30:81.20:0,81,941	0/0:28,0:28:63.16:0,63,727	0/0:19,0:19:51.13:0,51,594	0/0:17,0:17:51.16:0,51,616	0/0:20,0:20:57.17:0,57,689	1/1:1,17:18:48.08:463,48,0	0/0:28,0:28:78.20:0,78,909	0/0:28,0:28:78.24:0,78,942	0/0:11,0:11:30.09:0,30,362	0/0:7,0:7:18.05:0,18,208	0/0:15,0:15:39.12:0,39,471	0/0:13,0:13:39.12:0,39,471	0/0:19,0:19:45.13:0,45,533	0/0:21,0:21:51.09:0,51,589	0/0:34,0:34:99:0,99,1195	0/0:12,0:12:33.10:0,33,392
chr10	40023425	.	ACT	A	2331.35	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.626;DP=543;FS=3.257;HRun=0;HaplotypeScore=65.3111;InbreedingCoeff=0.9550;MQ=78.64;MQ0=2;MQRankSum=-2.622;QD=35.87;ReadPosRankSum=0.659;VQSLOD=5.6884;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:66.23:0,66,1218	0/0:9,0:9:27.09:0,27,498	0/0:11,0:11:28.64:0,29,454	0/0:14,0:14:5.67:0,6,312	0/0:31,0:31:93.31:0,93,1703	1/1:1,21:22:51.17:751,51,0	1/1:0,16:16:42.14:618,42,0	0/0:30,0:30:78.26:0,78,1431	1/1:0,27:25:75.25:1104,75,0	0/0:25,0:25:75.21:0,75,1342	0/0:32,0:32:93.32:0,93,1725	0/0:18,0:18:54.19:0,54,1011	0/0:20,0:20:60.21:0,60,1116	0/0:18,0:18:51.16:0,51,909	0/0:19,0:19:57.20:0,57,1068	0/0:18,0:18:54.19:0,54,1011	0/0:14,0:14:36.12:0,36,674	0/0:12,0:12:36.08:0,36,637	0/0:23,0:23:66.22:0,66,1207	0/0:14,0:14:39.13:0,39,731	0/0:9,0:9:27.08:0,27,474	0/0:14,0:14:42.13:0,42,749	0/0:25,0:25:72.25:0,72,1339	0/0:14,0:14:36.12:0,36,668	0/0:23,0:23:69.24:0,69,1287	0/0:30,0:30:90.30:0,90,1658	0/0:27,0:27:78.25:0,78,1428	0/0:5,0:5:15.05:0,15,281
chr10	40023891	.	G	GA	5645.50	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-14.565;DP=565;FS=0.731;HRun=7;HaplotypeScore=52.2166;InbreedingCoeff=0.9920;MQ=71.57;MQ0=0;MQRankSum=-1.006;QD=32.45;ReadPosRankSum=0.889;VQSLOD=4.4337;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:57.04:0,57,536	0/0:10,0:10:30.05:0,30,290	0/0:14,0:13:29.68:0,30,262	0/0:8,0:8:20.88:0,21,180	0/0:41,0:41:99:0,105,1013	0/0:21,0:21:57.09:0,57,551	0/0:10,0:10:21.03:0,21,203	1/1:5,18:23:57.16:674,57,0	0/0:22,0:22:63.10:0,63,608	0/0:26,0:26:78.11:0,78,747	0/0:29,0:29:84.14:0,84,811	0/0:22,0:22:63.10:0,63,608	0/0:26,0:26:75.08:0,75,711	0/0:13,0:13:36.06:0,36,347	0/0:20,0:20:60.10:0,60,579	0/0:12,0:12:36.06:0,36,348	0/0:36,0:36:96.14:0,96,924	0/0:12,0:12:21.02:0,21,202	1/1:3,17:20:51.16:616,51,0	1/1:3,30:33:90.28:1087,90,0	1/1:2,7:9:24.07:290,24,0	0/0:18,0:18:54.09:0,54,521	0/0:22,0:22:51.07:0,51,493	0/0:9,0:9:27.04:0,27,261	1/1:1,24:25:72.22:870,72,0	1/1:1,31:32:93.24:1096,93,0	1/1:2,26:28:72.22:868,72,0	1/1:0,4:4:12.04:145,12,0
chr10	40024073	.	G	GGAA	12032.81	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-15.488;DP=688;FS=0.637;HRun=0;HaplotypeScore=87.2253;InbreedingCoeff=0.9837;MQ=74.61;MQ0=1;MQRankSum=-3.433;QD=52.09;ReadPosRankSum=-1.288;VQSLOD=6.6945;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:93.25:0,93,1453	0/0:6,0:6:18.05:0,18,282	0/0:30,0:26:72.08:0,72,982	0/0:27,0:22:53.04:0,53,800	0/0:23,0:23:63.20:0,63,1043	0/0:25,0:25:69.21:0,69,1110	0/0:23,0:23:63.18:0,63,1017	1/1:2,41:46:99:2385,129,0	0/0:23,0:23:69.17:0,69,1041	0/0:27,0:27:78.22:0,78,1225	0/0:20,0:20:60.17:0,60,968	0/0:26,0:26:75.23:0,75,1222	0/0:37,0:37:99:0,102,1638	0/0:18,0:18:51.17:0,51,830	0/0:24,0:24:66.22:0,66,1101	0/0:23,0:23:66.17:0,66,1044	0/0:37,0:37:99:0,105,1680	0/0:7,0:7:21.07:0,21,351	1/1:1,15:16:48.05:735,48,0	1/1:0,24:25:66.04:1242,66,0	1/1:3,32:35:78.22:1749,78,0	0/0:15,0:15:45.13:0,45,716	0/0:16,0:16:32.24:0,32,677	0/0:18,0:18:54.14:0,54,841	1/1:0,31:31:75.26:1684,75,0	1/1:2,28:30:8.21:1731,8,0	1/1:1,40:41:96.30:2162,96,0	1/1:0,7:7:15.05:346,15,0
chr10	40025562	.	C	CTA	5348.41	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-11.901;DP=572;FS=1.831;HRun=0;HaplotypeScore=67.6962;InbreedingCoeff=0.9981;MQ=76.79;MQ0=0;MQRankSum=-0.949;QD=47.33;ReadPosRankSum=2.069;VQSLOD=6.2048;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:42.14:0,42,588	0/0:7,0:7:21.07:0,21,294	0/0:14,0:14:36.12:0,36,501	0/0:9,0:9:24.08:0,24,328	0/0:34,0:34:96.32:0,96,1343	1/1:0,27:27:69.23:1242,69,0	1/1:2,8:10:24.08:432,24,0	0/0:29,0:29:84.17:0,84,1086	1/1:1,17:18:51.17:919,51,0	0/0:28,0:28:78.26:0,78,1092	0/0:23,0:23:60.18:0,60,822	1/1:0,22:22:63.22:1135,63,0	0/0:22,0:22:66.19:0,66,888	0/0:20,0:20:57.19:0,57,798	0/0:16,0:16:45.15:0,45,630	0/0:26,0:26:72.24:0,72,1008	0/0:22,0:22:60.18:0,60,821	0/0:17,0:17:33.11:0,33,462	0/0:26,0:26:78.22:0,78,1043	0/0:21,0:21:63.18:0,63,847	0/0:12,0:12:33.10:0,33,445	0/0:21,0:21:57.18:0,57,782	1/1:2,23:25:60.21:1081,60,0	1/1:0,11:11:30.10:540,30,0	0/0:31,0:31:90.26:0,90,1208	0/0:25,0:25:75.25:0,75,1051	0/0:28,0:28:81.27:0,81,1134	0/0:13,0:13:36.02:0,36,504
chr10	40025707	.	TGA	T	7930.06	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=8.376;DP=634;FS=0.000;HRun=0;HaplotypeScore=90.7729;InbreedingCoeff=0.9970;MQ=86.14;MQ0=1;MQRankSum=-0.955;QD=42.18;ReadPosRankSum=0.595;VQSLOD=6.4141;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:45.11:0,45,830	0/0:11,0:11:33.11:0,33,638	0/0:23,0:23:66.23:0,66,1266	0/0:18,0:18:54.19:0,54,1033	0/0:31,0:31:93.32:0,93,1796	0/0:31,0:31:93.31:0,93,1763	0/0:25,0:25:75.26:0,75,1449	1/1:1,31:32:93.27:1353,93,0	0/0:23,0:23:69.22:0,69,1262	0/0:29,0:29:84.29:0,84,1623	0/0:28,0:28:81.28:0,81,1565	0/0:22,0:22:66.23:0,66,1252	0/0:23,0:23:69.22:0,69,1295	0/0:18,0:18:54.19:0,54,1041	0/0:32,0:32:96.33:0,96,1843	0/0:29,0:29:87.28:0,87,1619	0/0:20,0:20:60.21:0,60,1158	0/0:14,0:14:39.13:0,39,753	1/1:0,17:17:51.17:781,51,0	1/1:1,25:26:72.24:1101,72,0	1/1:0,30:29:78.26:1195,78,0	0/0:19,0:19:57.20:0,57,1078	0/0:19,0:19:57.18:0,57,1017	0/0:14,0:14:42.14:0,42,811	1/1:0,27:27:75.25:1149,75,0	1/1:3,24:27:17.25:1019,17,0	1/1:0,23:23:69.23:1057,69,0	1/1:0,6:6:18.06:276,18,0
chr10	40026961	.	T	TTTTTG	4803.81	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=-8.729;DP=603;FS=2.468;HRun=0;HaplotypeScore=145.3018;InbreedingCoeff=0.8226;MQ=62.97;MQ0=6;MQRankSum=2.995;QD=33.36;ReadPosRankSum=1.686;VQSLOD=5.0301;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:72.21:0,72,1239	0/0:7,0:7:12.04:0,12,220	0/0:27,0:15:12.09:0,12,238	0/0:35,0:19:8.76:0,9,112	0/0:27,0:27:51.15:0,51,870	1/1:4,15:20:42.14:1188,42,0	1/1:7,3:12:12.04:327,12,0	0/1:34,0:32:30.83:31,0,117	1/1:5,8:15:24.08:679,24,0	0/0:26,0:25:54.17:0,54,935	0/0:16,0:16:36.11:0,36,629	1/1:6,13:21:39.13:1072,39,0	0/0:19,0:19:27.08:0,27,458	0/0:18,0:18:33.10:0,33,563	0/0:21,0:21:36.11:0,36,629	0/0:23,0:23:39.11:0,39,650	0/0:34,0:34:63.64:0,64,1048	0/0:16,0:16:26.82:0,27,375	0/0:19,0:15:14.37:0,14,169	0/0:25,0:24:32.61:0,33,350	0/0:4,0:3:1.25:0,1,3	0/0:19,0:19:30.08:0,30,484	1/1:8,10:21:30.10:827,30,0	1/1:11,8:21:24.08:679,24,0	0/0:32,0:32:59.08:0,59,602	0/0:21,0:21:33.02:0,33,369	0/0:29,0:28:26.86:0,27,263	0/0:5,0:5:6.02:0,6,69
chr10	40026978	.	TTTGTTTTGTG	T	8195.76	PASS	AB=0.529;AC=15;AF=0.268;AN=56;BaseQRankSum=8.818;DP=613;FS=1.783;HRun=0;HaplotypeScore=177.2941;InbreedingCoeff=0.8718;MQ=56.83;MQ0=6;MQRankSum=-11.121;QD=52.54;ReadPosRankSum=-0.866;VQSLOD=4.4905;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:96.17:0,96,4097	0/0:8,0:8:20.88:0,21,696	0/0:33,0:19:12.37:0,12,988	0/0:37,0:16:18.43:0,18,594	0/0:28,0:28:75.19:0,75,3057	0/0:22,0:22:54.18:0,54,2122	0/0:15,0:15:36.03:0,36,839	1/1:3,25:26:54.16:1298,54,0	0/0:15,0:15:33.08:0,33,1245	0/0:30,0:29:84.25:0,84,3305	0/0:23,0:23:60.19:0,60,2348	0/0:22,0:22:54.16:0,54,2048	0/0:14,0:14:36.09:0,36,1494	0/0:20,0:20:45.14:0,45,1874	0/0:19,0:19:42.14:0,42,1959	0/0:21,0:21:57.16:0,57,2167	0/0:31,0:31:84.27:0,84,3661	0/0:15,0:14:29.46:0,29,1119	1/1:2,17:15:44.93:800,45,0	1/1:1,26:26:54.15:1631,54,0	1/1:4,0:3:8.99:158,9,0	0/0:19,0:19:50.94:0,51,1924	0/0:23,0:23:51.63:0,52,1716	0/0:23,0:23:44.91:0,45,1381	1/1:0,33:33:66.23:2145,66,0	0/1:2,16:18:99:1066,0,106	1/1:1,21:21:27.09:898,27,0	1/1:1,4:5:6.02:200,6,0
chr10	40028107	.	C	CAAAAAAAAA	18101.51	PASS	AB=1.000;AC=48;AF=0.857;AN=56;BaseQRankSum=2.828;DP=503;FS=19.270;HRun=13;HaplotypeScore=190.7023;InbreedingCoeff=0.6665;MQ=54.78;MQ0=2;MQRankSum=-7.386;QD=40.50;ReadPosRankSum=-4.053;VQSLOD=0.1352;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:23:28.67:0,29,614	1/1:7,0:5:6.02:191,6,0	0/0:15,0:14:22.28:0,22,358	0/0:15,0:14:17.72:0,18,255	1/1:27,0:26:39.23:1255,39,0	1/1:18,5:23:27.09:1064,27,0	1/1:15,0:14:24.06:637,24,0	1/1:31,0:29:43.31:741,43,0	1/1:22,0:22:42.14:1620,42,0	1/1:21,0:21:30.10:1125,30,0	1/1:18,0:17:31.63:1101,32,0	1/1:15,0:15:27.09:1016,27,0	0/1:14,0:14:13.68:14,0,102	0/1:20,0:21:5.23:5,0,354	1/1:22,0:22:24.08:988,24,0	1/1:19,0:19:30.10:1013,30,0	1/1:14,0:11:14.24:437,14,0	1/1:13,0:13:17.27:562,17,0	1/1:26,0:26:42.08:995,42,0	1/1:22,0:21:35.75:700,36,0	1/1:12,0:11:16.82:356,17,0	1/1:6,0:6:9.03:302,9,0	1/1:21,0:21:39.13:1309,39,0	1/1:13,0:12:3.01:38,3,0	1/1:22,0:21:46.61:942,47,0	1/1:16,0:16:38.34:809,38,0	1/1:18,0:18:24.08:620,24,0	1/1:4,0:5:14.64:263,15,0
chr10	40028531	.	G	GA	3608.81	PASS	AB=0.805;AC=16;AF=0.286;AN=56;BaseQRankSum=-6.813;DP=520;FS=5.069;HRun=8;HaplotypeScore=54.1889;InbreedingCoeff=0.8776;MQ=62.49;MQ0=8;MQRankSum=1.094;QD=22.14;ReadPosRankSum=-3.290;VQSLOD=2.6915;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,126,1152	0/0:10,0:10:21.01:0,21,192	0/0:9,0:8:22.78:0,23,188	0/1:5,0:3:0.01:0,0,0	0/0:25,0:24:51.02:0,51,467	0/0:20,0:20:42.02:0,42,384	0/0:12,0:12:27:0,27,247	1/1:9,26:34:53.76:864,54,0	0/0:21,0:21:57.03:0,57,521	0/0:17,0:17:51.02:0,51,464	0/0:20,0:20:48.02:0,48,439	0/0:15,0:15:36.01:0,36,329	0/0:16,0:16:39.02:0,39,355	0/0:20,0:20:48.02:0,48,439	0/0:11,0:11:30.02:0,30,275	0/0:16,0:16:39:0,39,352	0/0:38,0:37:81.04:0,81,741	0/0:13,0:13:30.01:0,30,272	1/1:1,21:22:63.17:716,63,0	1/1:7,17:23:45.09:503,45,0	1/1:0,11:11:18.05:208,18,0	0/0:10,0:9:21.01:0,21,192	0/0:20,0:20:51.03:0,51,467	0/0:18,0:18:45.02:0,45,411	1/1:3,11:13:21.06:242,21,0	0/1:9,16:21:24.97:453,0,25	1/1:3,15:17:36.11:415,36,0	1/1:0,9:9:18.05:208,18,0
chr10	40031378	.	CA	C	1544.77	PASS	AB=0.703;AC=15;AF=0.268;AN=56;BaseQRankSum=1.862;DP=560;FS=16.961;HRun=14;HaplotypeScore=72.4808;InbreedingCoeff=0.5623;MQ=69.59;MQ0=4;MQRankSum=1.932;QD=8.09;ReadPosRankSum=3.194;VQSLOD=1.0549;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:26:74.98:0,75,668	0/1:6,4:10:61.31:61,0,63	0/0:31,0:11:17.42:0,17,115	0/0:34,0:19:20.13:0,20,107	0/0:22,0:25:54.49:0,54,495	0/0:9,0:31:26.65:0,27,174	0/0:1,0:6:11.52:0,12,67	0/1:15,11:25:12.35:168,0,12	0/0:2,0:11:12.11:0,12,59	0/0:17,0:18:26.15:0,26,264	0/0:22,1:23:27.36:0,27,370	0/0:5,0:15:14.27:0,14,73	0/0:20,0:20:44.92:0,45,388	0/0:22,0:22:35.86:0,36,297	0/0:28,0:28:21.89:0,22,445	0/0:17,0:17:37.86:0,38,360	0/0:13,0:13:24:0,24,213	0/0:18,1:19:3.43:0,3,170	0/1:6,7:13:1.36:119,0,1	0/1:5,16:21:17.24:187,0,17	1/1:3,11:14:26.77:185,27,0	0/1:11,2:15:2.47:2,0,233	0/0:4,0:19:25.51:0,26,127	0/0:3,0:9:2.72:0,3,14	1/1:7,19:27:28.36:290,28,0	1/1:8,10:18:27.54:185,28,0	1/1:6,20:27:26.56:252,27,0	1/1:5,15:20:39.28:277,39,0
chr10	40032677	.	G	GT	3790.93	PASS	AB=0.875;AC=25;AF=0.446;AN=56;BaseQRankSum=-8.125;DP=565;FS=0.764;HRun=13;HaplotypeScore=65.8941;InbreedingCoeff=0.8672;MQ=70.18;MQ0=2;MQRankSum=3.422;QD=15.86;ReadPosRankSum=1.963;VQSLOD=4.7859;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:77:0,77,518	1/1:2,7:9:3.55:175,4,0	0/0:19,0:16:8.56:0,9,83	0/0:9,0:7:5.89:0,6,38	1/1:8,25:33:10.20:498,10,0	1/1:4,17:21:15.04:309,15,0	1/1:3,6:9:17.61:149,18,0	0/0:40,0:41:71.76:0,72,476	1/1:4,10:14:32.84:285,33,0	1/1:3,22:26:38.79:462,39,0	1/1:5,25:31:71.74:621,72,0	0/0:16,0:17:40.68:0,41,272	0/0:12,0:12:20.66:0,21,138	0/1:11,2:14:25.98:26,0,135	1/1:6,16:22:38.72:345,39,0	1/1:9,10:20:21.27:319,21,0	1/1:1,9:10:18.02:167,18,0	1/1:9,11:21:25.08:295,25,0	0/0:17,0:16:46.58:0,47,308	0/0:23,1:26:24.83:0,25,305	0/0:10,0:10:23.15:0,23,150	1/1:2,7:9:15.90:141,16,0	0/0:16,0:18:39.75:0,40,258	0/0:10,0:13:30.85:0,31,197	0/0:27,2:30:34.59:0,35,358	0/0:39,1:41:69.29:0,69,614	0/0:22,1:23:40.58:0,41,421	0/0:17,0:18:46.64:0,47,314
chr10	40032942	.	GA	G	394.91	PASS	AB=0.652;AC=1;AF=0.018;AN=56;BaseQRankSum=6.482;DP=737;FS=7.105;HRun=1;HaplotypeScore=73.7033;InbreedingCoeff=-0.0182;MQ=81.12;MQ0=0;MQRankSum=-2.561;QD=13.16;ReadPosRankSum=0.861;VQSLOD=2.2257;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,108,1642	0/0:14,0:14:39.13:0,39,622	0/0:24,0:24:72.25:0,72,1146	0/0:20,0:20:55.97:0,56,834	0/0:20,0:20:60.19:0,60,936	0/0:23,0:23:69.22:0,69,1060	0/0:30,0:29:87.24:0,87,1338	0/0:35,0:35:99:0,105,1567	0/0:26,0:26:69.12:0,69,1075	0/0:27,0:27:81.22:0,81,1266	0/0:33,0:33:99:0,99,1523	0/0:39,0:39:99:0,111,1688	0/0:38,0:38:99:0,108,1666	0/0:22,0:22:63.21:0,63,1002	0/0:32,0:32:90.25:0,90,1343	0/1:14,16:30:99:469,0,549	0/0:21,0:21:63.18:0,63,957	0/0:11,0:11:30.06:0,30,451	0/0:26,0:26:75.21:0,75,1122	0/0:27,0:27:78.26:0,78,1222	0/0:35,0:35:99:0,102,1603	0/0:15,0:15:45.15:0,45,717	0/0:19,0:19:57.17:0,57,886	0/0:26,0:26:75.24:0,75,1174	0/0:28,0:28:84.29:0,84,1338	0/0:28,0:28:84.25:0,84,1274	0/0:37,0:37:99:0,111,1763	0/0:10,0:10:30.10:0,30,479
chr10	40033896	.	G	GA	9650.46	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-5.101;DP=485;FS=2.359;HRun=9;HaplotypeScore=47.0939;InbreedingCoeff=0.9315;MQ=55.68;MQ0=16;MQRankSum=0.322;QD=25.13;ReadPosRankSum=-2.033;VQSLOD=4.8228;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:80.97:0,81,703	1/1:2,5:7:12.03:133,12,0	0/0:21,0:4:8.99:0,9,78	0/0:17,0:4:11.97:0,12,99	1/1:3,22:26:65.92:682,66,0	1/1:2,8:10:15.04:166,15,0	1/1:5,16:21:42.11:465,42,0	1/1:2,19:21:54.15:594,54,0	1/1:0,6:6:12.03:133,12,0	1/1:4,23:27:69.17:754,69,0	1/1:4,13:17:33.09:365,33,0	1/1:1,7:8:18.05:199,18,0	0/0:21,0:21:53.96:0,54,468	0/0:12,0:12:32.99:0,33,286	1/1:3,12:15:30.08:332,30,0	1/1:2,8:10:15.04:166,15,0	1/1:1,22:24:68.85:725,69,0	1/1:3,14:17:36.10:398,36,0	1/1:4,16:17:48.13:529,48,0	1/1:3,16:19:28.09:532,28,0	1/1:0,2:2:6.02:66,6,0	1/1:4,12:16:42.02:436,42,0	1/1:3,13:16:36.10:398,36,0	1/1:7,23:30:75.01:795,75,0	1/1:2,15:17:36.10:398,36,0	1/1:4,16:20:45.10:487,45,0	1/1:6,18:23:56.99:610,57,0	1/1:1,9:10:27.06:289,27,0
chr10	40034030	.	CA	C	596.03	PASS	AB=0.951;AC=15;AF=0.278;AN=54;BaseQRankSum=0.170;DP=457;FS=12.063;HRun=9;HaplotypeScore=50.1883;InbreedingCoeff=0.7051;MQ=65.56;MQ0=51;MQRankSum=-0.295;QD=3.80;ReadPosRankSum=0.017;VQSLOD=-0.4261;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,1:25:41.66:0,42,696	0/0:3,0:3:9.03:0,9,104	0/0:46,0:9:7.41:0,7,42	0/1:38,1:6:0.81:1,0,19	0/0:17,0:17:40.32:0,40,419	0/0:10,0:10:14.79:0,15,106	0/0:14,0:12:20.92:0,21,166	1/1:18,0:17:34.18:258,34,0	0/0:11,0:11:26.93:0,27,216	0/0:19,0:19:39.05:0,39,405	0/1:13,1:14:0.42:0,0,213	0/0:16,0:16:29.75:0,30,239	0/0:21,0:21:40.79:0,41,405	0/0:17,0:17:42.06:0,42,451	0/0:16,0:16:33.06:0,33,354	0/0:15,0:15:45.07:0,45,486	0/0:16,0:15:35.32:0,35,386	0/0:19,1:20:11.07:0,11,438	1/1:15,0:14:11.45:81,11,0	1/1:18,0:18:20.33:131,20,0	./.	0/0:10,0:10:3:0,3,26	0/0:10,0:10:14.97:0,15,123	0/0:9,0:9:26.89:0,27,208	1/1:9,0:9:5.42:23,5,0	1/1:19,0:19:11.23:120,11,0	0/1:16,1:17:10.89:60,0,11	1/1:8,0:8:16.68:96,17,0
chr10	40034038	.	A	AGG	650.08	PASS	AB=0.933;AC=13;AF=0.232;AN=56;BaseQRankSum=4.994;DP=453;FS=11.783;HRun=0;HaplotypeScore=66.1923;InbreedingCoeff=0.4493;MQ=63.09;MQ0=53;MQRankSum=-1.445;QD=4.17;ReadPosRankSum=-1.427;VQSLOD=0.4217;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:79.10:0,79,1185	0/0:3,0:3:9.03:0,9,147	0/0:45,0:7:7.56:0,8,43	0/1:38,0:6:1.02:1,0,19	0/0:19,0:19:54.05:0,54,784	0/1:10,0:10:3.26:3,0,60	0/0:12,0:10:3.05:0,3,90	0/1:17,0:16:2.29:90,0,2	0/0:12,0:12:24.54:0,25,200	0/0:15,0:15:45.10:0,45,665	0/0:14,0:14:30.51:0,31,403	0/0:12,0:12:13.97:0,14,368	0/0:18,0:18:54.05:0,54,734	0/0:15,0:15:42.13:0,42,629	0/0:18,0:18:39.13:0,39,612	0/0:18,0:18:51.04:0,51,798	0/0:16,0:15:38.34:0,38,590	0/0:20,0:20:54.14:0,54,803	0/1:12,1:13:6.01:76,0,6	0/1:6,6:18:1.44:79,0,1	0/1:9,0:8:13.84:29,0,14	0/0:6,0:6:12.02:0,12,143	0/0:13,0:13:14.94:0,15,137	0/0:12,0:12:27.04:0,27,306	1/1:5,0:7:8.75:53,9,0	0/1:17,0:17:0.17:169,0,0	1/1:10,3:14:9.79:162,10,0	1/1:10,2:12:7.15:141,7,0
chr10	40037882	.	C	CT	6089.47	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-7.751;DP=575;FS=10.495;HRun=10;HaplotypeScore=110.6860;InbreedingCoeff=0.9427;MQ=70.94;MQ0=4;MQRankSum=-3.150;QD=21.29;ReadPosRankSum=-3.258;VQSLOD=3.2728;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,1:29:50.80:0,51,342	0/0:15,0:15:41.04:0,41,245	0/0:17,0:10:7.37:0,7,70	0/0:19,0:14:4.05:0,4,65	0/0:39,0:39:79.88:0,80,526	1/1:6,20:27:69.49:683,69,0	1/1:9,8:16:26.54:254,27,0	1/1:19,13:32:60.15:634,60,0	1/1:5,8:14:33.37:321,33,0	0/0:21,0:21:38.52:0,39,309	0/0:20,0:20:37.25:0,37,329	1/1:11,15:26:57.95:576,58,0	0/0:18,0:18:25.89:0,26,161	0/0:21,0:21:19.27:0,19,181	0/0:15,0:15:32.37:0,32,205	0/0:18,0:18:26.46:0,26,165	0/0:30,0:30:67.13:0,67,393	0/0:14,0:14:31.46:0,31,168	1/1:8,11:17:41.94:427,42,0	1/1:12,12:23:52.29:515,52,0	1/1:2,8:11:4.27:126,4,0	0/0:13,0:12:26.37:0,26,165	1/1:2,16:18:32.65:455,33,0	1/1:2,3:5:12.03:126,12,0	1/1:5,20:26:35.41:563,35,0	1/1:4,24:28:53.15:689,53,0	1/1:16,14:30:40.20:523,40,0	1/1:4,4:8:20.21:197,20,0
chr10	40037893	.	C	CTT	13622.52	PASS	AB=0.792;AC=52;AF=0.929;AN=56;BaseQRankSum=-3.701;DP=558;FS=5.718;HRun=10;HaplotypeScore=88.2198;InbreedingCoeff=0.3345;MQ=63.20;MQ0=6;MQRankSum=0.964;QD=25.00;ReadPosRankSum=2.309;VQSLOD=4.7713;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,24:29:37.71:847,38,0	1/1:0,16:16:42.14:687,42,0	0/0:13,0:6:1.96:0,2,32	0/1:13,0:9:8.96:9,0,71	1/1:4,36:42:96.12:1380,96,0	1/1:5,22:28:67.16:1052,67,0	1/1:5,11:16:27.09:392,27,0	1/1:14,0:25:43.29:296,43,0	1/1:4,8:12:25.02:387,25,0	1/1:5,14:19:41:666,41,0	1/1:8,14:22:36.03:500,36,0	0/1:6,15:21:10.19:670,0,10	1/1:1,21:24:35.70:590,36,0	1/1:2,17:19:39.13:615,39,0	1/1:5,13:18:29.89:492,30,0	1/1:2,14:17:27.09:433,27,0	1/1:2,30:31:66.23:1083,66,0	1/1:2,12:14:36.02:557,36,0	1/1:7,0:16:29.52:148,30,0	1/1:3,0:24:43.68:281,44,0	1/1:4,0:10:9.81:58,10,0	1/1:0,12:12:33.10:504,33,0	1/1:7,12:19:48.99:665,49,0	1/1:1,7:8:12.04:184,12,0	1/1:9,0:24:55.14:362,55,0	1/1:10,1:25:51.70:345,52,0	1/1:5,0:22:41.10:287,41,0	1/1:2,0:10:20.18:133,20,0
chr10	40040664	.	ATT	A	2249.49	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-1.467;DP=469;FS=5.590;HRun=15;HaplotypeScore=76.2722;InbreedingCoeff=0.9656;MQ=70.63;MQ0=1;MQRankSum=-0.920;QD=14.24;ReadPosRankSum=2.002;VQSLOD=2.9501;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:11:28.31:0,28,289	0/0:1,0:8:15.02:0,15,142	0/0:27,0:13:11.54:0,12,166	0/0:26,0:17:7.65:0,8,177	0/0:10,0:32:81.06:0,81,812	0/0:14,0:17:40.55:0,41,441	0/0:6,0:7:18.05:0,18,231	1/1:10,16:27:50.22:412,50,0	0/0:9,0:10:29.77:0,30,372	0/0:10,0:26:57.54:0,58,596	0/0:6,0:20:56.88:0,57,550	0/0:8,0:12:24.07:0,24,301	0/0:11,0:13:27.26:0,27,341	0/0:11,0:11:33.09:0,33,424	0/0:5,0:15:15.01:0,15,142	0/0:8,0:15:36.03:0,36,390	0/0:5,0:17:39.07:0,39,416	0/0:5,0:13:33.06:0,33,349	1/1:11,16:30:53.87:433,54,0	1/1:2,20:25:30.25:429,30,0	1/1:1,4:6:11.74:91,12,0	0/0:4,0:8:18:0,18,197	0/0:8,0:12:27.06:0,27,326	0/0:10,0:10:24.84:0,25,244	1/1:3,15:18:22.80:324,23,0	1/1:4,13:19:29.52:288,30,0	1/1:4,14:20:23.19:241,23,0	1/1:4,9:13:26.95:238,27,0
chr10	40041744	.	G	GA	2943.98	PASS	AB=0.838;AC=25;AF=0.446;AN=56;BaseQRankSum=-2.752;DP=583;FS=0.000;HRun=15;HaplotypeScore=69.3289;InbreedingCoeff=0.4920;MQ=52.70;MQ0=26;MQRankSum=2.580;QD=8.46;ReadPosRankSum=-1.442;VQSLOD=2.3946;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:31:61.12:0,61,431	0/0:10,0:10:20.95:0,21,168	0/1:52,0:10:19.23:19,0,37	0/1:42,0:10:1.96:2,0,21	0/0:32,0:31:58.97:0,59,446	1/1:19,0:19:30.72:256,31,0	0/1:14,0:13:5.35:5,0,32	1/1:13,33:46:94.22:863,94,0	0/1:13,2:13:6.20:97,0,6	0/0:18,0:17:26.76:0,27,295	0/0:25,0:24:49.36:0,49,359	1/1:18,1:19:9.60:192,10,0	0/0:10,0:10:20.92:0,21,165	0/0:22,0:20:23.60:0,24,146	0/0:12,0:12:4.92:0,5,137	0/0:5,0:5:7.23:0,7,52	0/0:44,0:38:59.95:0,60,504	0/0:17,0:16:38.84:0,39,305	1/1:6,14:19:35.07:333,35,0	1/1:1,19:19:37.78:353,38,0	0/1:3,1:4:14.37:40,0,14	0/0:8,0:8:8.36:0,8,57	1/1:12,1:13:14.28:96,14,0	1/1:8,1:8:11.70:80,12,0	1/1:4,12:16:6.02:64,6,0	1/1:4,27:29:46.02:633,46,0	0/1:3,15:18:18.79:26,0,19	0/1:3,4:5:12.24:82,0,12
chr10	40041755	.	GA	G	594.91	PASS	AB=0.971;AC=14;AF=0.250;AN=56;BaseQRankSum=4.034;DP=571;FS=9.288;HRun=10;HaplotypeScore=77.0092;InbreedingCoeff=0.5854;MQ=57.36;MQ0=15;MQRankSum=-2.402;QD=3.34;ReadPosRankSum=-0.689;VQSLOD=-0.4365;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:66.11:0,66,697	0/0:9,0:9:24.06:0,24,262	0/1:42,0:10:4.24:4,0,77	0/1:36,0:10:3.32:3,0,65	0/0:34,0:33:72.59:0,73,769	1/1:19,0:19:4.03:251,4,0	1/1:5,7:12:6.80:45,7,0	0/0:48,0:48:99:0,106,1133	0/1:15,0:13:7.45:7,0,42	0/0:19,0:18:42.11:0,42,464	0/0:27,0:26:61.98:0,62,668	1/1:17,2:19:29.93:217,30,0	0/0:9,0:9:24.05:0,24,254	0/0:16,0:15:20.26:0,20,199	0/0:14,0:14:20.99:0,21,239	0/0:7,0:7:15.04:0,15,166	0/0:44,0:39:87.17:0,87,928	0/0:18,0:17:39.11:0,39,431	0/0:20,0:19:25.02:0,25,437	0/0:23,0:22:45.11:0,45,488	0/0:4,0:5:13.61:0,14,99	0/0:6,0:6:9.02:0,9,100	1/1:13,2:15:22.66:158,23,0	1/1:8,0:8:11.57:67,12,0	0/0:14,0:14:9.49:0,9,94	0/0:32,0:30:69.48:0,69,708	0/0:17,0:17:6:0,6,66	0/1:9,1:8:8.07:8,0,132
chr10	40042374	.	AC	A	7199.10	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=13.548;DP=564;FS=6.961;HRun=1;HaplotypeScore=55.5439;InbreedingCoeff=0.9992;MQ=79.24;MQ0=0;MQRankSum=-0.180;QD=37.30;ReadPosRankSum=-0.305;VQSLOD=4.7355;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:96.30:0,96,1382	0/0:10,0:10:30.07:0,30,400	0/0:11,0:11:29.33:0,29,334	0/0:15,0:15:33.55:0,34,420	0/0:32,0:32:96.29:0,96,1362	0/0:20,0:20:60.19:0,60,857	0/0:14,0:14:42.11:0,42,576	1/1:0,22:22:66.19:871,66,0	0/0:14,0:14:42.12:0,42,592	0/0:23,0:23:69.22:0,69,977	0/0:17,0:17:51.16:0,51,727	0/0:21,0:21:63.21:0,63,921	0/0:30,0:30:90.28:0,90,1294	0/0:15,0:15:45.15:0,45,657	0/0:27,0:27:81.27:0,81,1184	0/0:18,0:18:54.18:0,54,790	0/0:21,0:21:63.21:0,63,915	0/0:13,0:13:39.09:0,39,546	1/1:0,30:30:90.22:1155,90,0	1/1:0,26:26:78.22:1049,78,0	1/1:0,14:14:36.12:502,36,0	0/0:13,0:13:39.13:0,39,570	0/0:15,0:15:45.13:0,45,637	0/0:9,0:9:27.07:0,27,374	1/1:0,27:27:63.21:879,63,0	1/1:2,28:30:43.34:1092,43,0	1/1:0,36:36:96.28:1317,96,0	1/1:0,8:8:24.08:335,24,0
chr10	40042892	.	C	CT	3841.41	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=-11.599;DP=659;FS=1.786;HRun=6;HaplotypeScore=66.5905;InbreedingCoeff=0.9076;MQ=73.41;MQ0=1;MQRankSum=-1.560;QD=23.71;ReadPosRankSum=1.015;VQSLOD=3.1368;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:87.19:0,87,887	0/0:9,0:9:21.05:0,21,214	0/0:29,0:22:41.67:0,42,431	0/1:40,0:30:9.45:9,0,309	0/0:38,0:37:99:0,99,999	1/1:1,26:27:72.23:906,72,0	1/1:2,13:15:39.12:491,39,0	0/0:25,0:25:56.95:0,57,557	1/1:2,13:15:36.12:453,36,0	0/0:21,0:21:54.11:0,54,546	0/0:24,0:24:69.15:0,69,703	1/1:5,19:24:54.13:662,54,0	0/0:35,0:35:99:0,99,995	0/0:23,0:23:54.12:0,54,551	0/0:30,0:30:78.17:0,78,796	0/0:27,0:27:81.18:0,81,826	0/0:24,0:24:69.12:0,69,695	0/0:9,0:9:24.05:0,24,245	0/0:19,0:19:45.10:0,45,459	0/0:34,0:34:87.19:0,87,888	0/0:22,0:22:54.12:0,54,551	0/0:16,0:16:42.09:0,42,428	1/1:1,19:20:57.18:717,57,0	1/1:3,18:21:48.15:604,48,0	0/0:16,0:16:42.09:0,42,428	0/0:29,0:29:78.15:0,78,783	0/0:26,0:26:75.17:0,75,763	0/0:8,0:8:21.05:0,21,213
chr10	40044370	.	AG	A	3891.61	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=14.890;DP=688;FS=0.000;HRun=1;HaplotypeScore=73.8524;InbreedingCoeff=0.9966;MQ=62.41;MQ0=2;MQRankSum=0.715;QD=36.37;ReadPosRankSum=1.533;VQSLOD=4.0239;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:60,0:60:99:0,181,2816	0/0:11,0:11:33.11:0,33,527	0/0:14,0:11:33.09:0,33,477	0/0:19,0:15:40.35:0,40,597	0/0:31,0:31:93.32:0,93,1478	1/1:0,25:25:66.21:856,66,0	1/1:0,10:10:30.10:389,30,0	0/0:39,0:39:99:0,117,1719	1/1:0,23:23:69.22:895,69,0	0/0:18,0:18:54.18:0,54,863	0/0:21,0:21:63.21:0,63,986	1/1:0,19:19:51.17:662,51,0	0/0:28,0:28:84.29:0,84,1339	0/0:20,0:20:60.20:0,60,941	0/0:33,0:33:99:0,99,1529	0/0:31,0:31:93.29:0,93,1435	0/0:26,0:26:78.27:0,78,1239	0/0:21,0:21:60.13:0,60,890	0/0:24,0:24:72.22:0,72,1122	0/0:15,0:15:45.10:0,45,648	0/0:43,0:43:99:0,129,1946	0/0:23,0:23:66.19:0,66,986	1/1:1,14:15:42.14:545,42,0	1/1:0,15:15:42.14:545,42,0	0/0:23,0:23:69.24:0,69,1101	0/0:36,0:36:99:0,108,1613	0/0:40,0:38:99:0,120,1862	0/0:5,0:5:15.05:0,15,234
chr10	40044837	.	T	TA	5480.17	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-13.652;DP=600;FS=0.695;HRun=9;HaplotypeScore=57.9094;InbreedingCoeff=0.8838;MQ=71.55;MQ0=1;MQRankSum=0.556;QD=25.37;ReadPosRankSum=1.820;VQSLOD=5.4686;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:62.97:0,63,547	1/1:2,10:12:0.82:239,1,0	0/0:16,0:15:2.47:0,2,133	0/0:7,0:7:17.97:0,18,151	1/1:5,34:39:76.14:1041,76,0	0/0:22,0:22:59.95:0,60,512	0/0:17,0:17:44.97:0,45,386	0/0:28,0:28:68.96:0,69,597	0/0:21,0:21:50.95:0,51,439	1/1:5,25:30:75.13:799,75,0	1/1:3,24:27:72.19:797,72,0	0/0:19,0:19:53.98:0,54,466	0/0:25,0:25:68.99:0,69,599	0/0:16,0:16:35.97:0,36,308	1/1:5,18:24:53.94:565,54,0	1/1:2,16:18:48.13:531,48,0	1/1:2,21:23:60.16:664,60,0	1/1:5,12:17:4.06:273,4,0	0/0:20,0:20:53.85:0,54,450	0/0:20,0:20:53.94:0,54,459	0/0:11,0:11:29.98:0,30,260	1/1:6,20:26:31.11:571,31,0	0/0:26,0:26:65.91:0,66,561	0/0:10,0:10:26.98:0,27,230	0/0:24,0:24:59.92:0,60,508	0/0:25,2:29:3.66:0,4,464	0/0:35,0:35:98.90:0,99,839	0/0:13,0:13:38.99:0,39,339
chr10	40046517	.	AT	A	2973.72	PASS	AB=0.833;AC=19;AF=0.339;AN=56;BaseQRankSum=5.657;DP=503;FS=1.223;HRun=11;HaplotypeScore=55.7337;InbreedingCoeff=0.6490;MQ=74.82;MQ0=0;MQRankSum=-0.573;QD=12.55;ReadPosRankSum=1.902;VQSLOD=3.3888;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:48.12:0,48,512	0/1:11,2:13:13.24:13,0,265	0/1:19,1:17:0.92:1,0,169	0/1:9,1:8:14.46:19,0,14	0/0:24,0:24:38.50:0,38,606	0/0:4,0:20:51.49:0,51,286	0/0:4,0:15:34.55:0,35,200	1/1:7,18:26:55.91:444,56,0	0/0:2,0:16:34.57:0,35,208	0/0:20,2:22:13.86:0,14,551	0/0:23,0:23:51.12:0,51,537	0/0:13,0:13:36.08:0,36,377	0/1:9,2:11:19.24:19,0,215	0/0:9,0:9:24.06:0,24,255	0/0:21,0:22:60:0,60,609	0/0:13,0:13:27.54:0,28,289	0/0:15,0:15:42.03:0,42,425	0/0:19,0:19:48.11:0,48,505	1/1:0,13:13:38.93:317,39,0	1/1:7,29:36:48.84:592,49,0	1/1:2,15:17:35.95:296,36,0	0/0:14,1:16:23.30:0,23,431	0/0:11,0:11:21.05:0,21,224	0/0:9,0:9:20.89:0,21,206	1/1:4,16:20:41.95:345,42,0	1/1:5,17:22:24.10:389,24,0	1/1:5,28:33:52.07:525,52,0	0/1:5,10:16:7.65:214,0,8
chr10	40046892	.	C	CTAAAAA	13553.14	PASS	AB=0.513;AC=17;AF=0.304;AN=56;BaseQRankSum=11.558;DP=659;FS=1.119;HRun=0;HaplotypeScore=141.1180;InbreedingCoeff=0.9050;MQ=74.33;MQ0=0;MQRankSum=-13.740;QD=70.96;ReadPosRankSum=-0.414;VQSLOD=5.5075;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:69.09:0,69,1480	1/1:0,5:6:14.88:540,15,0	0/0:17,0:16:42.05:0,42,867	0/0:13,0:13:36.11:0,36,805	1/1:1,24:42:85.22:2384,85,0	0/0:32,0:32:96.25:0,96,2118	0/0:16,0:16:48.14:0,48,1089	0/0:38,0:38:99:0,108,2409	0/0:20,0:20:60.18:0,60,1429	1/1:0,12:18:54.10:1669,54,0	1/1:0,21:27:63.04:1916,63,0	0/0:27,0:27:81.26:0,81,1999	0/0:35,0:35:99:0,105,2464	0/0:25,0:25:72.21:0,72,1736	1/1:0,24:30:63.22:2242,63,0	0/1:1,15:20:31.53:1451,0,32	1/1:0,8:13:17.98:489,18,0	1/1:0,5:6:12.04:407,12,0	0/0:27,0:27:75.23:0,75,1767	0/0:30,0:30:90.21:0,90,1986	0/0:40,0:40:99:0,117,2837	1/1:0,28:29:75.16:2455,75,0	0/0:16,0:16:45.10:0,45,971	0/0:18,0:17:54.15:0,54,1238	0/0:22,0:22:66.11:0,66,1469	0/0:26,0:26:31.45:0,31,1692	0/0:37,0:36:99:0,108,2360	0/0:6,0:6:18.06:0,18,460
chr10	40047307	.	T	TCACACACACA	14187.06	PASS	AB=0.802;AC=50;AF=0.893;AN=56;BaseQRankSum=-2.312;DP=629;FS=6.780;HRun=0;HaplotypeScore=220.0005;InbreedingCoeff=0.3149;MQ=54.18;MQ0=8;MQRankSum=-2.159;QD=25.56;ReadPosRankSum=2.414;VQSLOD=3.1916;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:16,3:22:5.76:298,6,0	1/1:7,1:10:12.04:494,12,0	0/0:26,0:17:2.90:0,3,16	0/0:47,0:30:23.92:0,24,417	1/1:15,4:18:2.74:149,3,0	0/1:10,0:29:25.42:376,0,25	1/1:7,0:23:6.89:149,7,0	1/1:25,0:25:30.10:1133,30,0	1/1:3,0:10:12.04:423,12,0	1/1:25,0:25:30.10:1109,30,0	1/1:15,3:22:2.72:150,3,0	1/1:18,0:17:11.66:275,12,0	1/1:13,2:19:24.08:974,24,0	1/1:11,11:24:30.10:1374,30,0	1/1:10,10:21:30.10:1436,30,0	1/1:18,6:25:27.09:1196,27,0	1/1:8,3:15:9.03:392,9,0	0/1:14,0:14:2.69:516,0,3	1/1:18,0:18:22.24:422,22,0	1/1:24,1:30:4.28:13,4,0	1/1:24,0:28:4.32:25,4,0	1/1:14,3:19:11.41:459,11,0	1/1:4,0:22:3.01:130,3,0	1/1:24,0:24:12.30:273,12,0	1/1:28,1:36:5.96:280,6,0	1/1:25,0:27:31.66:1132,32,0	1/1:18,1:22:20.86:896,21,0	1/1:3,0:3:6.02:115,6,0
chr10	40049234	.	A	ACGCACG	739.37	PASS	AB=0.911;AC=6;AF=0.111;AN=54;BaseQRankSum=5.612;DP=531;FS=4.791;HRun=0;HaplotypeScore=124.5849;InbreedingCoeff=0.2465;MQ=40.66;MQ0=78;MQRankSum=1.400;QD=5.28;ReadPosRankSum=0.370;VQSLOD=2.1816;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:22:14.38:0,14,262	0/0:10,0:8:16.81:0,17,294	./.	0/0:6,0:3:1:0,1,24	0/0:16,0:15:18.06:0,18,281	0/1:12,12:22:41.80:158,0,42	1/1:39,0:32:2.81:238,3,0	0/0:14,0:10:27.06:0,27,347	0/0:17,0:15:2.77:0,3,67	0/0:15,0:12:33.57:0,34,534	0/0:10,0:7:9.02:0,9,125	0/1:23,0:20:39.92:94,0,40	0/0:16,0:13:18.39:0,18,385	0/0:21,0:19:27.26:0,27,505	0/0:18,0:15:27.56:0,28,435	0/0:13,0:11:18.51:0,19,271	0/0:44,0:41:99:0,102,1721	0/0:19,0:13:32.80:0,33,401	0/0:10,0:6:15.05:0,15,227	0/0:15,0:7:8.82:0,9,142	0/0:49,0:30:45.46:0,45,562	0/0:15,0:15:36.07:0,36,610	0/1:13,0:12:0.04:0,0,0	0/1:38,0:33:4.78:358,0,5	0/0:16,0:13:12.03:0,12,194	0/0:15,0:8:18.06:0,18,267	0/0:10,0:10:23.62:0,24,314	0/0:12,0:7:15.03:0,15,198
chr10	40049257	.	CCT	C	67.92	PASS	AB=0.975;AC=13;AF=0.232;AN=56;BaseQRankSum=4.966;DP=503;FS=10.791;HRun=0;HaplotypeScore=101.1953;InbreedingCoeff=-0.0448;MQ=49.84;MQ0=29;MQRankSum=-1.824;QD=0.38;ReadPosRankSum=0.776;VQSLOD=0.9775;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:32,0:30:52.75:53,0,681	0/0:6,0:6:18.06:0,18,307	0/1:17,0:12:36.92:37,0,215	0/0:19,0:14:17.69:0,18,355	0/0:12,0:12:24.08:0,24,394	0/1:25,0:22:9.96:40,0,10	0/0:26,0:25:10.26:0,10,67	0/0:18,0:16:5.13:0,5,36	0/1:6,1:7:17.48:30,0,17	0/0:14,0:13:5.68:0,6,464	0/0:4,0:4:6.02:0,6,97	0/0:18,1:17:1.48:0,1,46	0/1:15,0:14:1.53:2,0,413	0/0:17,0:15:29.57:0,30,428	0/0:18,0:15:36.12:0,36,600	0/0:12,0:11:21.88:0,22,329	0/0:43,0:42:48.33:0,48,1383	0/1:16,0:13:3.02:3,0,425	0/1:10,1:9:1.16:2,0,1	0/0:9,0:5:2.90:0,3,22	0/0:49,2:42:1.62:0,2,49	0/0:15,0:15:36.07:0,36,589	0/1:11,0:11:0.10:0,0,0	0/0:37,2:36:10.13:0,10,121	0/1:12,1:12:6.75:7,0,34	1/1:9,2:7:1.34:8,1,0	0/1:11,0:11:5.93:6,0,39	0/1:12,0:8:0.54:1,0,36
chr10	40049403	.	A	ATATT	2389.05	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-6.279;DP=498;FS=3.292;HRun=0;HaplotypeScore=78.1892;InbreedingCoeff=0.9531;MQ=68.02;MQ0=1;MQRankSum=-0.308;QD=53.09;ReadPosRankSum=2.637;VQSLOD=4.7689;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,17:19:45.15:1152,45,0	0/0:6,0:6:18.06:0,18,336	0/0:10,0:10:21.05:0,21,288	0/0:7,0:7:5.81:0,6,112	0/0:27,0:27:75.20:0,75,1253	0/0:21,0:21:60.21:0,60,1113	0/0:15,0:15:39.12:0,39,677	0/0:41,0:39:99:0,114,1930	0/0:7,0:6:18.05:0,18,300	0/0:22,0:22:63.20:0,63,1094	0/0:17,0:17:48.08:0,48,857	0/0:19,0:19:48.06:0,48,805	1/1:1,10:11:21.07:559,21,0	1/1:3,12:15:33.08:819,33,0	0/0:15,0:15:45.10:0,45,771	0/0:16,0:16:39.10:0,39,637	0/0:28,0:28:69.22:0,69,1238	0/0:17,0:17:42.08:0,42,707	0/0:19,0:19:55.05:0,55,972	0/0:23,0:23:66.23:0,66,1214	0/0:17,0:17:48.13:0,48,824	0/0:14,0:14:36.09:0,36,584	0/0:10,0:10:30.10:0,30,560	0/0:25,0:25:66.14:0,66,1072	0/0:18,0:18:45.15:0,45,789	0/0:27,0:27:78.23:0,78,1366	0/0:18,0:18:54.19:0,54,1007	0/0:14,0:14:24.06:0,24,388
chr10	40050007	.	TA	T	1777.28	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=8.674;DP=490;FS=0.000;HRun=1;HaplotypeScore=47.8198;InbreedingCoeff=0.7985;MQ=77.78;MQ0=0;MQRankSum=-3.678;QD=30.12;ReadPosRankSum=2.132;VQSLOD=3.2911;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:72.21:0,72,965	0/0:4,0:4:12.03:0,12,150	0/0:17,0:17:45.07:0,45,552	0/1:6,0:7:37.87:38,0,134	0/0:18,0:18:54.15:0,54,716	1/1:0,17:17:48.16:666,48,0	1/1:1,12:13:36.03:472,36,0	0/0:39,0:39:99:0,114,1466	1/1:0,22:22:54.18:750,54,0	0/0:23,0:23:68.79:0,69,830	0/0:15,0:15:45.10:0,45,574	0/0:14,0:14:41.59:0,42,502	0/0:12,0:12:36.12:0,36,502	0/0:17,0:17:45.12:0,45,593	0/0:25,0:25:75.21:0,75,996	0/0:16,0:16:43.56:0,44,625	0/0:20,0:20:60.17:0,60,800	0/0:21,0:21:60.10:0,60,806	0/0:9,0:9:27.08:0,27,360	0/0:29,0:29:81.20:0,81,1060	0/0:22,0:22:66.13:0,66,847	0/0:2,0:2:6.01:0,6,67	0/0:9,0:9:27.07:0,27,359	0/0:8,0:8:24.06:0,24,316	0/0:26,0:26:78.25:0,78,1073	0/0:27,0:27:81.12:0,81,1071	0/0:27,0:27:81.22:0,81,1072	0/0:7,0:7:21.07:0,21,293
chr10	40050237	.	AT	A	3077.27	PASS	AB=0.900;AC=23;AF=0.411;AN=56;BaseQRankSum=5.404;DP=410;FS=0.000;HRun=10;HaplotypeScore=46.9824;InbreedingCoeff=0.8300;MQ=74.47;MQ0=6;MQRankSum=0.991;QD=15.54;ReadPosRankSum=-0.685;VQSLOD=3.3169;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,14:16:41.99:365,42,0	0/0:10,0:10:27.07:0,27,299	0/0:26,0:10:4.59:0,5,70	0/0:26,0:11:18.67:0,19,136	0/0:19,0:20:41.95:0,42,445	0/0:4,0:16:40.26:0,40,248	0/0:0,0:3:5.68:0,6,28	1/1:4,25:29:74.98:651,75,0	0/0:2,0:12:28.61:0,29,161	0/0:13,0:13:33.09:0,33,365	0/0:16,0:16:42.11:0,42,465	0/0:9,0:9:24.05:0,24,251	1/1:2,5:7:11.63:104,12,0	1/1:1,7:9:20.99:182,21,0	0/0:9,0:9:27.07:0,27,299	0/0:13,0:13:36.08:0,36,389	0/0:24,0:24:60.16:0,60,664	0/1:24,3:27:12:12,0,554	1/1:11,9:20:26.98:234,27,0	1/1:3,19:22:56.98:494,57,0	1/1:1,3:4:9:78,9,0	0/0:2,0:2:3.01:0,3,33	0/0:11,0:11:21.06:0,21,231	0/0:2,0:2:3.01:0,3,33	1/1:3,12:15:26.99:234,27,0	1/1:4,16:20:41.95:365,42,0	1/1:3,20:23:50.98:443,51,0	1/1:1,5:6:15:130,15,0
chr10	40051111	.	CT	C	4779.18	PASS	AB=0.731;AC=33;AF=0.589;AN=56;BaseQRankSum=6.909;DP=492;FS=2.923;HRun=12;HaplotypeScore=55.3067;InbreedingCoeff=0.8264;MQ=60.66;MQ0=7;MQRankSum=2.675;QD=14.62;ReadPosRankSum=1.117;VQSLOD=5.6376;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:45.09:0,45,457	1/1:0,2:2:5.98:46,6,0	0/0:19,0:8:6.48:0,6,59	0/1:14,0:9:4.55:5,0,45	1/1:6,25:33:56.95:413,57,0	0/0:19,0:19:42.08:0,42,426	0/0:15,0:15:32.28:0,32,312	1/1:10,27:37:50.10:561,50,0	0/0:20,0:20:53.94:0,54,531	1/1:5,12:18:37.83:277,38,0	1/1:0,14:14:35.86:278,36,0	0/0:15,0:15:42.06:0,42,413	0/0:13,0:13:27.05:0,27,274	0/0:16,0:16:45.04:0,45,439	1/1:6,18:25:49.83:377,50,0	0/1:2,10:12:0.56:179,0,1	1/1:3,14:17:15.33:235,15,0	1/1:2,12:14:29.88:232,30,0	1/1:7,8:15:23.88:186,24,0	1/1:3,25:28:69.16:534,69,0	1/1:1,4:5:11.95:93,12,0	1/1:3,10:13:23.89:186,24,0	0/0:21,1:22:39.44:0,39,544	0/0:8,0:8:24.05:0,24,244	1/1:0,18:19:35.86:279,36,0	1/1:7,21:29:65.72:510,66,0	1/1:4,17:21:38.69:293,39,0	0/1:5,6:11:1.29:96,0,1
chr10	40053464	.	A	AAAC	305.74	PASS	AB=0.766;AC=2;AF=0.036;AN=56;BaseQRankSum=5.649;DP=567;FS=4.671;HRun=0;HaplotypeScore=82.8533;InbreedingCoeff=-0.0376;MQ=82.31;MQ0=0;MQRankSum=5.535;QD=9.86;ReadPosRankSum=-5.104;VQSLOD=1.0205;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:81.28:0,81,1381	0/0:6,0:6:18.06:0,18,307	0/1:10,6:17:99:299,0,247	0/1:11,2:14:95.86:96,0,322	0/0:31,0:31:84.27:0,84,1381	0/0:21,0:21:60.18:0,60,972	0/0:19,0:19:54.17:0,54,896	0/0:23,0:23:69.21:0,69,1105	0/0:19,0:19:54.17:0,54,872	0/0:25,0:25:72.24:0,72,1203	0/0:17,0:17:48.12:0,48,763	0/0:19,0:19:57.18:0,57,918	0/0:19,0:19:57.19:0,57,965	0/0:29,0:29:84.28:0,84,1408	0/0:24,0:24:72.24:0,72,1202	0/0:23,0:23:66.22:0,66,1101	0/0:21,0:21:63.20:0,63,1049	0/0:16,0:16:48.16:0,48,818	0/0:16,0:16:45.14:0,45,720	0/0:18,0:18:54.16:0,54,870	0/0:19,0:19:57.19:0,57,947	0/0:15,0:15:45.14:0,45,739	0/0:23,0:23:66.23:0,66,1125	0/0:19,0:19:57.19:0,57,941	0/0:19,0:19:51.17:0,51,846	0/0:20,0:20:60.21:0,60,1023	0/0:39,0:38:99:0,117,1952	0/0:7,0:7:18.06:0,18,307
chr10	40054001	.	AT	A	22432	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=10.472;DP=785;FS=7.209;HRun=2;HaplotypeScore=90.0166;InbreedingCoeff=0.9996;MQ=79.87;MQ0=0;MQRankSum=-4.854;QD=35.38;ReadPosRankSum=2.652;VQSLOD=5.1530;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,153,2185	1/1:0,12:12:30.10:389,30,0	0/0:18,0:18:45.12:0,45,615	0/0:18,0:18:54.11:0,54,740	1/1:0,54:54:99:1907,153,0	1/1:1,19:20:57.19:739,57,0	1/1:0,37:37:99:1324,102,0	1/1:0,30:30:87.21:1046,87,0	1/1:1,32:33:84.27:1090,84,0	1/1:0,32:32:96.26:1191,96,0	1/1:0,30:30:78.13:971,78,0	1/1:0,34:34:93.30:1207,93,0	0/0:23,0:23:63.16:0,63,865	0/0:37,0:37:99:0,111,1622	1/1:0,35:35:96.31:1246,96,0	1/1:1,25:26:66.21:857,66,0	1/1:0,32:32:90.22:1147,90,0	1/1:1,22:23:60.19:779,60,0	1/1:2,17:19:51.15:646,51,0	1/1:0,25:25:75.18:952,75,0	1/1:0,31:31:84.27:1090,84,0	1/1:0,26:26:78.25:1012,78,0	1/1:0,29:29:78.13:1012,78,0	1/1:0,14:14:36.12:467,36,0	1/1:2,24:26:75.23:959,75,0	1/1:1,31:32:93.28:1191,93,0	1/1:0,24:24:66.09:857,66,0	1/1:0,10:10:27.09:350,27,0
chr10	40054468	.	C	CTGT	17480.84	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-15.961;DP=827;FS=22.694;HRun=0;HaplotypeScore=109.3537;InbreedingCoeff=0.9799;MQ=63.83;MQ0=8;MQRankSum=-0.728;QD=35.60;ReadPosRankSum=3.562;VQSLOD=3.2815;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,99,1318	1/1:4,7:11:21.07:420,21,0	0/0:37,0:25:4.60:0,5,486	0/0:26,0:24:56.94:0,57,757	1/1:11,21:32:54.15:954,54,0	0/0:19,0:19:51.16:0,51,732	0/0:30,0:31:77.52:0,78,990	1/1:6,20:25:63.06:913,63,0	0/0:20,0:20:54.15:0,54,736	1/1:7,20:29:63.01:1107,63,0	1/1:7,13:20:26.92:347,27,0	0/0:38,0:38:99:0,99,1380	0/0:29,0:29:78.25:0,78,1124	0/0:34,0:34:90.22:0,90,1210	1/1:7,42:50:90.18:1874,90,0	1/1:6,20:26:50.38:1006,50,0	1/1:7,25:32:59.57:1177,60,0	1/1:3,17:21:39.13:812,39,0	1/1:11,11:23:39.12:704,39,0	1/1:11,25:36:75.17:1423,75,0	1/1:7,23:31:45.15:896,45,0	1/1:6,15:22:39.09:684,39,0	0/0:26,0:26:54.16:0,54,759	0/0:33,0:33:90.29:0,90,1308	1/1:4,28:32:66.23:1374,66,0	1/1:5,30:35:87.23:1609,87,0	1/1:7,37:43:66.17:1374,66,0	1/1:3,18:20:36.52:807,37,0
chr10	40055695	.	A	AGTGTGT	337.24	PASS	AB=0.846;AC=12;AF=0.300;AN=40;BaseQRankSum=-4.109;DP=499;FS=1.217;HRun=0;HaplotypeScore=151.2088;InbreedingCoeff=0.4612;MQ=57.92;MQ0=26;MQRankSum=3.024;QD=2.46;ReadPosRankSum=-0.888;VQSLOD=2.7469;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:23:9.85:0,10,134	0/0:10,0:10:3.43:0,3,20	./.	./.	1/1:28,0:25:5.97:45,6,0	1/1:20,0:20:8.27:109,8,0	1/1:21,0:21:2.89:32,3,0	0/0:27,0:27:4.63:0,5,17	0/0:16,0:16:3.48:0,3,32	./.	./.	./.	1/1:18,0:18:11.42:133,11,0	0/1:10,5:18:7.71:125,0,8	0/0:26,0:25:20.41:0,20,166	0/0:15,0:14:13.42:0,13,135	0/1:20,0:18:1.91:2,0,121	0/0:20,0:19:11.70:0,12,112	0/0:15,0:13:3.01:0,3,42	0/0:19,0:18:6.02:0,6,83	./.	1/1:12,0:8:2.97:23,3,0	./.	0/0:16,0:16:8.58:0,9,100	0/0:18,0:13:6.02:0,6,84	0/0:17,0:17:15.05:0,15,209	0/0:25,0:24:5.88:0,6,83	./.
chr10	40055725	.	TGTGTGTGTGTGTGTGTGTGAGAGAGAGA	T	5585.57	PASS	AB=0.935;AC=20;AF=0.357;AN=56;BaseQRankSum=4.964;DP=502;FS=21.433;HRun=0;HaplotypeScore=235.8040;InbreedingCoeff=0.3325;MQ=42.62;MQ0=36;MQRankSum=-1.696;QD=24.61;ReadPosRankSum=-1.466;VQSLOD=2.2851;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:20:41.98:0,42,3425	0/0:10,0:10:14.86:0,15,776	0/0:26,0:2:6.02:0,6,117	0/0:30,0:13:4.81:0,5,1308	0/0:20,0:17:21:0,21,985	0/0:18,0:17:13.61:0,14,1082	0/1:22,0:21:44.92:45,0,907	1/1:28,0:27:7.07:1229,7,0	0/0:16,0:16:14.84:0,15,630	0/1:10,0:9:60.50:61,0,931	0/0:7,0:5:3.01:0,3,109	0/1:15,0:14:99:124,0,257	0/0:16,0:16:29.91:0,30,1761	0/0:19,0:19:20.68:0,21,1784	0/0:29,0:28:40.02:0,40,2520	0/0:16,0:15:24.95:0,25,1311	0/1:26,0:24:49.65:50,0,1786	0/1:25,0:25:57.94:58,0,1875	1/1:6,8:10:23.73:678,24,0	1/1:6,12:17:6.02:454,6,0	1/1:19,0:16:3.48:50,3,0	0/0:12,0:8:9.03:0,9,601	0/0:14,0:13:2.60:0,3,183	0/0:20,0:20:14.57:0,15,622	1/1:5,9:10:6.02:454,6,0	1/1:3,12:15:35.83:1774,36,0	0/1:7,12:18:38.34:517,0,38	1/1:2,0:2:3.01:92,3,0
chr10	40055741	.	TGTGAGAGAGAGA	T	4972.65	PASS	AB=1.000;AC=27;AF=0.519;AN=52;BaseQRankSum=6.511;DP=426;FS=19.367;HRun=0;HaplotypeScore=123.4891;InbreedingCoeff=0.2946;MQ=48.39;MQ0=23;MQRankSum=-6.113;QD=20.30;ReadPosRankSum=5.524;VQSLOD=2.2891;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:20:39.56:0,40,1627	0/1:8,0:8:4.45:4,0,32	0/0:36,0:8:24.08:0,24,1095	0/0:29,0:14:5.51:0,6,1392	0/0:15,0:13:6.02:0,6,83	0/1:21,0:20:38.72:39,0,118	0/1:17,0:16:39.50:80,0,40	1/1:17,0:16:39.97:1212,40,0	0/0:13,0:13:3.48:0,3,44	1/1:6,0:6:15.05:447,15,0	./.	1/1:10,2:12:11.59:365,12,0	0/0:11,0:11:18.53:0,19,646	0/0:20,0:20:20.95:0,21,997	0/1:28,0:28:24.75:25,0,229	0/1:11,0:11:49.08:139,0,49	0/1:23,0:22:99:234,0,184	0/1:22,0:22:99:118,0,269	1/1:12,0:10:17.80:501,18,0	1/1:12,0:12:6.02:191,6,0	./.	0/0:10,0:7:6.02:0,6,83	0/0:2,7:8:0:0,0,0	1/1:1,16:17:11.40:278,11,0	1/1:11,0:9:6.02:191,6,0	1/1:13,0:13:27.02:866,27,0	1/1:12,0:12:6.02:191,6,0	1/1:3,0:3:3.01:92,3,0
chr10	40055743	.	TGAGAGAGAGA	T	5112.06	PASS	AB=0.630;AC=27;AF=0.563;AN=48;BaseQRankSum=5.150;DP=413;FS=0.000;HRun=0;HaplotypeScore=113.7791;InbreedingCoeff=0.3581;MQ=52.50;MQ0=21;MQRankSum=-5.851;QD=22.32;ReadPosRankSum=4.392;VQSLOD=3.7750;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:18:36.59:0,37,1444	0/0:3,4:7:0.47:0,0,1	0/0:39,0:11:33.11:0,33,1568	0/0:32,0:17:3.79:0,4,1602	./.	0/1:8,12:20:12.40:47,0,12	0/1:7,8:15:13.42:80,0,13	1/1:2,14:15:42.11:1215,42,0	0/0:3,9:12:0.47:0,0,1	1/1:0,5:5:15.05:468,15,0	./.	1/1:7,6:13:14.63:462,15,0	0/0:11,0:11:18.53:0,19,574	0/0:19,0:19:20.99:0,21,919	0/1:12,12:27:15.09:117,0,15	1/1:3,2:9:12.04:269,12,0	0/1:7,13:21:32.61:313,0,33	0/1:10,12:22:96.14:96,0,148	1/1:12,0:10:17.91:487,18,0	1/1:12,0:12:6.02:163,6,0	./.	./.	0/0:8,0:7:0:0,0,0	1/1:17,0:17:10.06:179,10,0	1/1:10,0:9:6.02:163,6,0	1/1:13,0:13:27.07:796,27,0	1/1:12,0:12:6.02:163,6,0	1/1:0,3:3:3.01:92,3,0
chr10	40057466	.	G	GA	6856.45	PASS	AB=0.681;AC=43;AF=0.768;AN=56;BaseQRankSum=-2.991;DP=573;FS=0.491;HRun=11;HaplotypeScore=67.4773;InbreedingCoeff=0.5415;MQ=68.81;MQ0=4;MQRankSum=-0.641;QD=13.63;ReadPosRankSum=2.646;VQSLOD=5.0878;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:55.45:0,55,405	1/1:4,9:13:6.84:251,7,0	0/0:20,0:18:19.03:0,19,177	0/1:18,0:8:0.04:0,0,49	0/1:13,15:28:24.66:343,0,25	0/1:6,18:24:27.62:293,0,28	1/1:2,13:15:11.37:255,11,0	1/1:4,3:24:48.81:289,49,0	1/1:5,10:15:18.03:179,18,0	1/1:7,24:31:54.72:703,55,0	0/1:7,15:23:15.72:361,0,16	1/1:4,12:16:12.53:285,13,0	0/0:14,0:14:29.67:0,30,222	0/0:13,0:13:32.84:0,33,255	0/1:8,15:24:1.55:335,0,2	1/1:4,13:19:14.63:333,15,0	1/1:8,19:27:48.10:487,48,0	1/1:5,11:16:18.03:183,18,0	1/1:4,0:17:35.32:177,35,0	1/1:5,3:23:48.56:283,49,0	1/1:4,1:6:8.69:58,9,0	1/1:7,24:32:16.35:488,16,0	1/1:6,18:25:44.92:440,45,0	1/1:3,13:16:12.51:292,13,0	1/1:3,2:24:40.27:248,40,0	1/1:6,0:29:62.12:310,62,0	1/1:7,1:23:41.96:218,42,0	1/1:3,0:12:8.52:43,9,0
chr10	40057762	.	GTTTTTGTT	G	10090.24	PASS	AB=1.000;AC=28;AF=0.500;AN=56;BaseQRankSum=-3.649;DP=639;FS=0.328;HRun=0;HaplotypeScore=188.6798;InbreedingCoeff=0.7417;MQ=56.82;MQ0=3;MQRankSum=-4.251;QD=28.91;ReadPosRankSum=-0.106;VQSLOD=4.4666;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:69.10:0,69,1506	1/1:9,0:9:23.82:261,24,0	0/0:24,0:12:26.97:0,27,505	0/0:22,0:14:32.10:0,32,548	0/1:21,0:20:99:394,0,141	0/0:15,0:15:33.10:0,33,911	0/0:18,0:18:39.11:0,39,1010	1/1:24,0:24:63.17:1109,63,0	0/0:20,0:20:39.13:0,39,1214	1/1:19,0:19:50.87:685,51,0	1/1:20,1:21:53.74:881,54,0	0/0:23,0:23:63.21:0,63,1465	0/0:22,0:22:57.19:0,57,1323	0/0:29,0:29:75.22:0,75,1657	0/0:34,0:34:38.56:0,39,525	0/1:20,0:20:2.19:2,0,301	0/1:34,0:34:16.86:17,0,339	1/1:14,0:14:36.02:594,36,0	1/1:28,0:28:60:888,60,0	1/1:18,0:18:50.63:694,51,0	1/1:26,0:25:54.93:856,55,0	0/1:13,0:13:99:312,0,121	0/0:25,0:25:72.24:0,72,1741	0/0:27,0:27:68.20:0,68,1571	1/1:32,0:32:83.78:1258,84,0	1/1:27,0:27:75.82:1085,76,0	1/1:30,0:30:62.71:818,63,0	1/1:8,5:13:23.79:238,24,0
chr10	40057768	.	GTTT	G	7159.84	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=7.393;DP=640;FS=1.457;HRun=7;HaplotypeScore=148.7276;InbreedingCoeff=0.9988;MQ=56.19;MQ0=3;MQRankSum=-2.708;QD=18.65;ReadPosRankSum=1.128;VQSLOD=1.3506;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:69.10:0,69,1008	1/1:5,5:10:23.90:251,24,0	0/0:24,0:11:26.28:0,26,465	0/0:19,0:12:32.05:0,32,482	1/1:23,0:23:41.64:233,42,0	0/0:16,0:16:33.10:0,33,644	0/0:16,0:16:42.13:0,42,820	1/1:23,0:24:39.77:370,40,0	0/0:18,0:18:39.13:0,39,854	1/1:12,6:18:35.60:509,36,0	1/1:16,6:22:62.73:562,63,0	0/0:22,0:22:63.12:0,63,958	0/0:22,0:22:53.45:0,53,908	0/0:33,0:33:83.40:0,83,1296	1/1:30,0:30:62.12:420,62,0	1/1:21,0:21:35.79:251,36,0	1/1:36,0:36:25.95:263,26,0	1/1:13,2:15:41.54:332,42,0	1/1:17,5:24:62.17:543,62,0	1/1:13,5:18:49.38:433,49,0	1/1:25,2:26:50.79:506,51,0	1/1:15,0:16:32.36:198,32,0	0/0:27,0:27:75.23:0,75,1300	0/0:30,0:30:74.52:0,75,1106	1/1:25,8:33:86.93:836,87,0	1/1:19,6:26:59.12:678,59,0	1/1:23,4:28:45.63:530,46,0	1/1:6,6:12:24.01:243,24,0
chr10	40057776	.	GTT	G	11547.30	PASS	AB=0.658;AC=32;AF=0.571;AN=56;BaseQRankSum=1.999;DP=658;FS=0.000;HRun=7;HaplotypeScore=123.6224;InbreedingCoeff=0.8664;MQ=55.76;MQ0=5;MQRankSum=-3.360;QD=28.51;ReadPosRankSum=-1.679;VQSLOD=3.6795;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:33.43:0,33,293	1/1:4,5:9:24.07:291,24,0	0/0:21,0:8:21.06:0,21,280	0/0:18,0:9:21.54:0,22,283	1/1:4,21:24:56.84:736,57,0	0/0:16,0:16:27.07:0,27,320	0/0:17,0:17:30.62:0,31,399	0/1:9,23:30:31.46:802,0,31	0/0:23,0:23:39.11:0,39,466	0/1:14,8:22:5.99:664,0,6	1/1:16,7:23:66.14:797,66,0	0/0:23,0:23:30.46:0,30,273	0/0:21,0:21:30.86:0,31,294	0/0:29,0:29:39.62:0,40,412	1/1:2,31:33:66.18:926,66,0	1/1:4,20:24:51.08:697,51,0	1/1:3,34:37:45.10:620,45,0	1/1:12,4:16:38.86:467,39,0	1/1:18,6:24:65.36:750,65,0	1/1:15,6:21:45.31:620,45,0	1/1:22,7:28:66.10:819,66,0	1/1:2,13:15:28.94:505,29,0	0/0:27,0:27:49.33:0,49,545	0/0:29,0:29:33.01:0,33,278	1/1:22,8:30:81.25:1062,81,0	1/1:21,7:26:71.17:880,71,0	1/1:16,9:25:55.81:659,56,0	1/1:6,6:12:24:251,24,0
chr10	40057778	.	T	TTG	1472.88	PASS	AB=0.784;AC=25;AF=0.446;AN=56;BaseQRankSum=8.074;DP=663;FS=0.000;HRun=0;HaplotypeScore=162.6089;InbreedingCoeff=0.3775;MQ=55.70;MQ0=7;MQRankSum=-2.031;QD=3.99;ReadPosRankSum=-5.172;VQSLOD=1.1905;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:28:57.94:0,58,589	1/1:5,0:9:12.03:36,12,0	0/0:23,0:8:21.07:0,21,274	0/0:21,0:9:21.05:0,21,265	0/1:24,0:25:25.89:57,0,26	0/1:4,0:16:53.50:53,0,129	0/1:8,0:16:41.56:42,0,240	0/1:33,0:31:98.34:144,0,98	0/1:6,1:24:73.70:74,0,205	0/1:13,0:22:33.66:102,0,34	1/1:9,0:23:29.69:179,30,0	0/0:6,0:22:60.05:0,60,614	0/0:8,0:22:54.05:0,54,560	0/0:11,0:28:78.02:0,78,801	0/0:31,0:33:24.59:0,25,121	0/0:21,0:25:11.27:0,11,83	0/0:35,0:36:22.54:0,23,93	1/1:5,0:16:30.21:124,30,0	1/1:11,0:24:7.59:94,8,0	1/1:8,0:20:22.71:124,23,0	1/1:14,0:27:24.61:194,25,0	0/1:16,0:16:21.63:22,0,47	0/0:13,0:28:72.11:0,72,802	0/0:7,0:28:71.84:0,72,715	1/1:10,0:30:49.29:180,49,0	1/1:15,0:26:22.54:134,23,0	0/1:11,0:25:4.83:85,0,5	0/1:13,0:14:1.52:28,0,2
chr10	40058093	.	TA	T	12819.57	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=6.857;DP=476;FS=3.918;HRun=3;HaplotypeScore=49.9828;InbreedingCoeff=0.9978;MQ=73.99;MQ0=0;MQRankSum=-3.887;QD=34.28;ReadPosRankSum=1.919;VQSLOD=5.3785;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,120,1716	1/1:0,10:10:30.09:371,30,0	0/0:16,0:16:45.15:0,45,618	0/0:12,0:12:28.43:0,28,363	1/1:0,19:19:54.17:669,54,0	1/1:0,17:17:51.16:632,51,0	1/1:1,23:24:57.18:707,57,0	1/1:1,24:25:66.21:817,66,0	1/1:0,13:13:39.12:484,39,0	1/1:0,16:16:48.15:594,48,0	1/1:0,14:14:42.13:521,42,0	1/1:0,7:7:21.07:260,21,0	0/0:15,0:15:45.15:0,45,648	0/0:17,0:17:51.17:0,51,731	1/1:2,18:20:48.15:595,48,0	1/1:1,23:24:63.20:781,63,0	1/1:0,32:32:90.28:1116,90,0	1/1:0,19:19:57.18:704,57,0	1/1:0,10:10:30.07:357,30,0	1/1:0,10:10:27.08:335,27,0	1/1:0,21:21:60.19:743,60,0	1/1:0,10:10:30.09:372,30,0	1/1:0,11:11:33.10:409,33,0	1/1:0,11:11:30.09:372,30,0	1/1:1,12:13:30.09:372,30,0	1/1:0,18:18:51.13:606,51,0	1/1:2,17:19:51.16:632,51,0	1/1:0,11:11:30.09:372,30,0
chr10	40058260	.	A	AAATAAT	4089.98	PASS	AC=46;AF=0.958;AN=48;BaseQRankSum=-0.129;DP=232;FS=0.000;HRun=0;HaplotypeScore=50.3920;InbreedingCoeff=0.0682;MQ=65.47;MQ0=0;MQRankSum=-0.646;QD=20.15;ReadPosRankSum=0.750;VQSLOD=2.7861;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:11:6.02:135,6,0	1/1:4,3:8:8.96:212,9,0	./.	0/0:7,0:7:3.01:0,3,53	1/1:4,0:5:2.94:18,3,0	1/1:8,0:10:3.01:78,3,0	1/1:3,2:5:6.02:141,6,0	1/1:38,0:38:45.13:1055,45,0	./.	./.	1/1:6,3:9:9.03:257,9,0	1/1:2,0:3:3.01:78,3,0	1/1:5,0:5:6.02:122,6,0	1/1:5,0:5:3.01:73,3,0	1/1:2,0:4:2.94:18,3,0	1/1:6,3:9:9.01:217,9,0	1/1:15,0:26:36.85:225,37,0	1/1:4,3:9:3.01:97,3,0	1/1:3,0:3:3.01:74,3,0	1/1:4,0:4:3.01:64,3,0	./.	1/1:2,0:4:2.94:18,3,0	1/1:7,0:7:3.01:65,3,0	1/1:4,0:4:3.48:74,3,0	1/1:2,1:5:9.03:218,9,0	1/1:9,1:10:9.03:284,9,0	1/1:10,0:10:3.01:81,3,0	1/1:5,4:9:15.05:484,15,0
chr10	40058496	.	CTAGATAGATAGATAGATAGATAGATAGA	C	3538.07	PASS	AB=0.579;AC=23;AF=0.500;AN=46;BaseQRankSum=1.302;DP=268;FS=5.739;HRun=0;HaplotypeScore=173.4562;InbreedingCoeff=0.7223;MQ=51.21;MQ0=3;MQRankSum=-2.718;QD=31.59;ReadPosRankSum=1.211;VQSLOD=1.8371;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:26.99:0,27,986	1/1:0,0:1:3.01:76,3,0	0/0:10,0:4:10.26:0,10,280	0/0:10,0:6:15.05:0,15,756	./.	0/0:11,0:11:15.05:0,15,1080	0/0:16,0:16:27.07:0,27,1654	1/1:5,8:13:21.06:456,21,0	0/0:10,0:10:15.05:0,15,1030	1/1:5,0:5:12.04:372,12,0	./.	0/0:7,0:15:18.06:0,18,1446	0/0:13,0:13:11.99:0,12,362	0/0:13,0:13:9.03:0,9,385	1/1:2,0:5:3.01:132,3,0	0/1:3,0:11:15.97:263,0,16	1/1:4,14:19:3.01:224,3,0	1/1:4,0:12:11.93:145,12,0	1/1:2,6:8:14.97:307,15,0	./.	1/1:22,0:22:14.49:191,14,0	./.	0/0:1,0:1:3.01:0,3,47	0/0:19,0:19:25.36:0,25,1777	./.	1/1:6,0:9:21.07:749,21,0	1/1:1,0:4:9.03:410,9,0	1/1:3,0:3:6.02:212,6,0
chr10	40058517	.	TAGATAGATAGAC	T	1924.84	PASS	AB=1.000;AC=27;AF=0.587;AN=46;BaseQRankSum=3.418;DP=232;FS=14.260;HRun=0;HaplotypeScore=95.0123;InbreedingCoeff=0.1416;MQ=47.66;MQ0=6;MQRankSum=-3.733;QD=10.29;ReadPosRankSum=1.397;VQSLOD=0.7658;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:1,36:37:15.05:517,15,0	1/1:1,0:1:3.01:66,3,0	0/0:7,0:2:3.01:0,3,31	0/0:8,0:4:12.02:0,12,146	./.	0/0:7,0:7:12.04:0,12,264	0/1:13,0:13:6.89:7,0,260	./.	0/1:11,0:11:43.79:44,0,364	0/1:6,0:6:49:84,0,49	0/0:1,0:1:0:0,0,0	0/1:16,0:16:0.89:1,0,729	1/1:0,12:12:6.02:224,6,0	1/1:0,15:15:9.03:333,9,0	1/1:3,0:3:3.01:59,3,0	1/1:9,0:9:6.02:126,6,0	0/1:16,0:16:12.98:63,0,13	0/1:13,0:13:21.06:21,0,82	1/1:6,0:6:3.01:40,3,0	./.	0/0:10,0:10:6.46:0,6,50	./.	0/0:1,0:1:3.01:0,3,119	0/1:18,0:18:19.49:19,0,500	./.	1/1:6,0:6:12.04:235,12,0	1/1:3,0:3:9.03:192,9,0	1/1:2,0:1:3.01:39,3,0
chr10	40058625	.	A	ATGGGTGGG	1889.92	PASS	AB=0.952;AC=28;AF=0.519;AN=54;BaseQRankSum=-1.899;DP=315;FS=6.711;HRun=0;HaplotypeScore=74.5532;InbreedingCoeff=0.2574;MQ=25.33;MQ0=88;MQRankSum=-2.147;QD=8.47;ReadPosRankSum=0.415;VQSLOD=0.3188;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:9:6.93:0,7,92	1/1:1,0:1:1.55:4,2,0	0/0:13,0:1:3:0,3,25	0/0:24,0:3:5.38:0,5,84	./.	1/1:16,0:10:12.25:82,12,0	0/1:18,0:13:27.68:45,0,28	0/1:19,0:12:8.76:101,0,9	1/1:8,0:8:9.31:57,9,0	1/1:20,0:12:25.18:291,25,0	0/0:2,0:2:0:0,0,0	0/1:15,0:10:22.38:28,0,22	0/0:14,0:11:20.30:0,20,185	0/0:6,0:6:13.90:0,14,86	0/1:5,7:10:0:0,0,0	0/1:11,0:9:7.71:302,0,8	1/1:9,0:9:14.47:195,14,0	1/1:1,6:7:6.02:190,6,0	1/1:7,0:2:6.01:63,6,0	0/0:3,0:2:2.93:0,3,41	0/1:23,0:6:0.01:0,0,0	0/1:5,0:4:10.03:10,0,15	1/1:10,0:6:2.80:13,3,0	0/1:12,0:12:30.27:81,0,30	0/0:3,0:2:2.96:0,3,19	1/1:21,0:10:4.50:358,4,0	1/1:8,0:7:14.64:226,15,0	0/0:3,0:1:3.01:0,3,33
chr10	40058645	.	GTGGA	G	479.45	PASS	AB=0.956;AC=16;AF=0.296;AN=54;BaseQRankSum=1.562;DP=320;FS=1.756;HRun=0;HaplotypeScore=58.3005;InbreedingCoeff=0.2377;MQ=37.00;MQ0=82;MQRankSum=-2.468;QD=4.03;ReadPosRankSum=0.488;VQSLOD=1.6300;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:10:18.42:0,18,197	0/1:2,0:2:8.26:8,0,45	0/0:21,0:4:0.03:0,0,100	0/0:30,0:10:17.09:0,17,294	./.	0/0:14,0:8:11.93:0,12,100	0/1:21,0:16:23.18:23,0,189	0/1:14,1:10:30.57:31,0,93	0/0:8,0:7:11.84:0,12,118	0/0:15,0:9:13.01:0,13,141	0/0:2,0:2:3.01:0,3,33	0/0:18,0:13:6.15:0,6,314	0/0:13,0:10:17.75:0,18,178	0/0:7,0:7:9.02:0,9,112	0/0:11,0:9:6.02:0,6,68	0/0:8,0:6:3.48:0,3,70	0/0:4,0:4:8.87:0,9,59	0/0:6,0:6:13.74:0,14,102	0/1:10,0:5:11.72:37,0,12	1/1:3,3:4:9.03:132,9,0	1/1:17,8:10:5.65:73,6,0	0/1:7,0:6:1.11:1,0,137	0/0:12,0:7:5.07:0,5,82	0/0:9,0:9:15.51:0,16,190	1/1:1,4:4:3.01:56,3,0	0/1:15,5:12:74.18:174,0,74	1/1:4,1:4:8.15:77,8,0	1/1:3,0:1:2.97:20,3,0
chr10	40058872	.	A	AACACACACACATACACACA	2691.90	PASS	AB=0.949;AC=23;AF=0.442;AN=52;BaseQRankSum=2.853;DP=629;FS=20.783;HRun=0;HaplotypeScore=281.2867;InbreedingCoeff=-0.4000;MQ=69.33;MQ0=18;MQRankSum=-2.641;QD=5.38;ReadPosRankSum=-3.854;VQSLOD=0.8818;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:52,0:52:99:145,0,675	1/1:6,0:6:6.01:92,6,0	0/1:45,0:28:20.66:21,0,381	0/1:45,0:23:13.04:13,0,298	0/0:9,0:9:0.47:0,0,1	0/1:9,0:17:48.64:49,0,52	0/1:15,0:21:1.85:2,0,435	0/1:32,0:31:88.39:223,0,88	0/1:21,0:18:60.34:60,0,210	1/1:21,0:21:13.06:278,13,0	./.	0/1:23,0:22:99:277,0,169	0/0:6,0:20:17.11:0,17,122	0/0:12,0:22:17.92:0,18,252	0/1:33,0:33:44.29:44,0,98	0/1:28,0:28:24.29:24,0,259	0/1:22,0:22:23.24:23,0,96	0/1:18,0:19:44.59:381,0,45	0/1:28,0:27:96.07:322,0,96	0/0:14,0:14:2.80:0,3,13	0/0:20,0:19:8.90:0,9,56	0/0:12,0:12:9.03:0,9,151	0/1:14,0:14:45.98:46,0,238	0/1:20,0:29:74.46:74,0,288	./.	0/1:19,0:18:51.96:65,0,52	0/1:19,0:19:25.16:641,0,25	1/1:2,0:2:3.01:61,3,0
chr10	40058874	.	C	CACACACACAT	6974.77	PASS	AB=1.000;AC=36;AF=0.720;AN=50;BaseQRankSum=4.053;DP=626;FS=11.064;HRun=0;HaplotypeScore=192.0100;InbreedingCoeff=-0.0032;MQ=67.59;MQ0=20;MQRankSum=-3.226;QD=13.73;ReadPosRankSum=1.468;VQSLOD=3.2311;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:55,0:54:99:376,0,242	1/1:3,4:7:6.02:250,6,0	0/0:45,0:28:13.84:0,14,283	0/0:45,0:22:8.08:0,8,190	0/1:9,0:9:0:0,0,0	0/1:16,0:15:14.94:111,0,15	0/1:20,0:20:47.63:48,0,193	1/1:28,0:27:54.91:614,55,0	0/1:22,0:19:76.19:76,0,97	1/1:3,17:21:39.28:508,39,0	./.	0/1:23,0:22:92.71:474,0,93	0/1:20,0:20:39.52:141,0,40	0/1:25,0:24:24.02:24,0,97	1/1:34,0:34:39.11:723,39,0	1/1:30,0:30:23.96:647,24,0	1/1:22,0:22:4.28:382,4,0	1/1:18,2:20:37.98:784,38,0	1/1:30,0:29:45.01:586,45,0	1/1:14,0:13:3:25,3,0	1/1:22,0:20:14.95:134,15,0	1/1:12,0:12:8.84:55,9,0	0/1:14,0:14:70.94:165,0,71	0/1:29,0:28:99:117,0,178	./.	1/1:18,0:17:21.45:239,21,0	1/1:17,0:17:28.03:495,28,0	./.
chr10	40058878	.	C	CACACAT	7017.25	PASS	AB=0.969;AC=30;AF=0.600;AN=50;BaseQRankSum=0.890;DP=640;FS=8.747;HRun=0;HaplotypeScore=150.2829;InbreedingCoeff=-0.2511;MQ=63.95;MQ0=21;MQRankSum=-3.127;QD=13.34;ReadPosRankSum=6.834;VQSLOD=2.2771;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:57,0:56:99:454,0,249	1/1:6,0:6:6.02:166,6,0	0/0:43,0:24:17.11:0,17,302	0/0:45,0:22:9.78:0,10,243	0/1:0,9:11:0:0,0,0	0/1:15,0:14:14.94:130,0,15	0/1:22,0:22:27.51:28,0,214	1/1:27,0:26:36.67:439,37,0	0/1:21,0:18:58.76:59,0,97	1/1:25,0:25:16.46:446,16,0	./.	0/1:23,0:22:96.87:256,0,97	0/1:20,0:20:39.54:298,0,40	0/1:25,0:24:57.35:57,0,138	1/1:4,31:37:38.89:1283,39,0	1/1:8,22:30:30.17:1196,30,0	1/1:5,19:28:5.68:633,6,0	0/1:20,0:20:2.16:455,0,2	0/1:30,0:29:0.65:378,0,1	0/1:15,0:14:18.92:19,0,19	0/1:21,0:19:6.04:116,0,6	1/1:10,2:12:12.03:164,12,0	0/1:14,0:14:59.80:60,0,77	0/1:28,0:27:49.82:50,0,145	./.	0/1:19,0:17:18.59:204,0,19	0/1:20,0:20:19.69:127,0,20	./.
chr10	40058880	.	C	CACAT	4824.74	PASS	AB=0.975;AC=27;AF=0.540;AN=50;BaseQRankSum=3.869;DP=624;FS=8.489;HRun=0;HaplotypeScore=131.5171;InbreedingCoeff=-0.3586;MQ=59.90;MQ0=21;MQRankSum=-3.752;QD=9.93;ReadPosRankSum=8.958;VQSLOD=2.3461;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:55,0:54:99:229,0,275	1/1:6,0:6:6.02:114,6,0	0/0:39,0:22:16.99:0,17,302	0/0:41,0:18:15.74:0,16,255	./.	0/1:14,0:13:14.94:59,0,15	0/0:22,0:22:1.75:0,2,237	0/1:26,0:25:14.23:310,0,14	0/1:22,0:19:11.27:11,0,119	0/1:23,0:23:30.45:299,0,30	./.	0/1:23,0:22:97.01:108,0,97	0/1:20,0:20:38.55:121,0,39	0/1:25,0:24:9.57:10,0,153	1/1:36,1:37:18.20:745,18,0	1/1:24,6:30:23.20:971,23,0	1/1:25,1:26:30:480,30,0	0/1:21,0:21:3.43:347,0,3	0/1:30,0:29:15.67:323,0,16	0/1:15,0:14:17.96:19,0,18	0/1:20,0:18:7.25:116,0,7	0/1:3,8:11:7.10:228,0,7	0/1:14,0:14:35.94:36,0,77	0/1:27,0:26:5.66:6,0,137	./.	0/1:19,0:17:29.68:158,0,30	0/1:20,0:20:58.41:125,0,58	1/1:2,0:2:2.68:11,3,0
chr10	40058882	.	C	CAT	2411.93	PASS	AB=0.971;AC=20;AF=0.370;AN=54;BaseQRankSum=5.812;DP=625;FS=1.451;HRun=0;HaplotypeScore=127.0640;InbreedingCoeff=-0.0843;MQ=57.77;MQ0=22;MQRankSum=-3.171;QD=6.95;ReadPosRankSum=9.715;VQSLOD=2.2102;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:53:23.49:0,23,389	1/1:6,0:6:6.01:62,6,0	0/0:37,0:20:23.74:0,24,309	0/0:40,0:19:19.23:0,19,281	0/1:12,0:12:0:0,0,0	0/1:14,0:13:8.15:8,0,16	0/0:22,0:22:27.10:0,27,264	0/1:27,0:26:83.39:313,0,83	0/0:20,0:17:5.71:0,6,125	0/1:20,0:20:64.74:137,0,65	./.	0/0:22,0:21:20.38:0,20,141	0/1:20,0:20:15.69:16,0,64	0/0:25,0:24:16.76:0,17,177	1/1:36,1:37:18.13:387,18,0	1/1:28,0:28:23.14:460,23,0	0/1:26,0:26:8.40:236,0,8	0/1:22,0:22:30.76:236,0,31	0/1:31,0:29:52.16:290,0,52	0/1:16,0:15:17.96:19,0,18	0/1:21,0:19:7.25:116,0,7	0/1:13,0:13:11.92:90,0,12	0/1:14,0:14:20.95:21,0,77	0/0:27,0:26:12.02:0,12,153	0/0:15,0:15:2.99:0,3,24	0/1:6,9:16:32.06:117,0,32	0/1:22,0:22:67.71:68,0,91	0/0:2,0:2:2.04:0,2,6
chr10	40059375	.	TA	T	1091.21	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=2.875;DP=465;FS=4.156;HRun=10;HaplotypeScore=71.7637;InbreedingCoeff=0.8851;MQ=78.70;MQ0=0;MQRankSum=-0.885;QD=21.40;ReadPosRankSum=1.111;VQSLOD=4.7410;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:18:33.04:0,33,409	0/0:10,0:10:24.06:0,24,266	0/0:15,0:17:21.99:0,22,277	0/0:17,0:16:20.84:0,21,230	0/0:21,0:21:28.11:0,28,538	1/1:0,29:29:83.98:729,84,0	1/1:3,9:12:29.99:260,30,0	0/0:20,0:20:48.11:0,48,516	1/1:1,9:10:29.86:244,30,0	0/0:18,0:18:39.11:0,39,431	0/0:10,0:10:30:0,30,314	0/0:15,0:15:7.65:0,8,276	0/0:18,0:18:48.13:0,48,529	0/0:15,0:16:41.92:0,42,434	0/0:17,1:18:22.03:0,22,450	0/0:14,0:14:42.10:0,42,454	0/0:20,0:19:51.14:0,51,564	0/0:8,0:8:20.89:0,21,212	0/0:18,1:19:21.44:0,21,436	0/0:24,0:24:69.19:0,69,763	0/0:8,0:8:14.11:0,14,222	0/0:10,0:10:1.04:0,1,239	0/0:15,0:15:42.11:0,42,465	0/0:10,0:10:27.07:0,27,299	0/0:22,0:22:54.11:0,54,584	0/0:18,0:18:48.13:0,48,531	0/0:40,0:38:95.90:0,96,1020	0/0:8,0:8:24.06:0,24,265
chr10	40059423	.	C	CT	5803.10	PASS	AB=1.000;AC=35;AF=0.625;AN=56;BaseQRankSum=0.137;DP=542;FS=1.782;HRun=11;HaplotypeScore=129.0197;InbreedingCoeff=0.9014;MQ=66.03;MQ0=2;MQRankSum=-6.285;QD=16.53;ReadPosRankSum=-1.927;VQSLOD=3.6660;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:25.62:0,26,326	1/1:5,1:11:20.94:118,21,0	0/0:28,0:19:22.58:0,23,142	0/0:19,0:14:5.22:0,5,74	1/1:11,0:28:47.30:257,47,0	0/0:5,0:31:56.61:0,57,178	0/0:4,0:11:16.28:0,16,47	1/1:6,14:20:48.05:474,48,0	0/0:1,0:10:18.58:0,19,53	1/1:9,1:28:65.22:372,65,0	1/1:6,1:18:38.04:202,38,0	0/0:15,0:15:35.85:0,36,278	0/0:17,0:18:31.86:0,32,236	0/0:17,0:17:38.82:0,39,302	1/1:8,0:21:53.13:283,53,0	1/1:5,2:24:53.52:317,54,0	1/1:9,0:14:28.69:164,29,0	1/1:3,1:9:20.18:121,20,0	1/1:11,14:25:50.99:487,51,0	1/1:3,23:26:72.06:704,72,0	1/1:1,6:7:18.04:183,18,0	1/1:3,0:4:5.82:36,6,0	0/0:20,0:21:40.84:0,41,308	0/1:7,0:7:4.79:5,0,78	1/1:7,19:26:39.89:581,40,0	1/1:7,16:21:54.07:536,54,0	1/1:18,25:42:49.13:811,49,0	1/1:4,5:9:15.03:152,15,0
chr10	40059438	.	GCT	G	3607.83	PASS	AB=0.983;AC=37;AF=0.661;AN=56;BaseQRankSum=9.031;DP=540;FS=15.092;HRun=0;HaplotypeScore=141.6260;InbreedingCoeff=0.0901;MQ=60.71;MQ0=3;MQRankSum=-5.689;QD=7.89;ReadPosRankSum=8.197;VQSLOD=1.7222;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:43:0,43,985	1/1:10,0:10:1.65:98,2,0	0/0:33,0:15:13.76:0,14,444	0/1:23,0:12:31.04:61,0,31	1/1:28,1:29:17.08:264,17,0	0/1:27,0:27:9.63:231,0,10	0/1:9,0:9:12.34:59,0,12	0/1:23,0:21:64.07:78,0,64	1/1:14,0:14:15.88:122,16,0	0/1:28,2:30:99:155,0,126	1/1:22,1:22:31.62:271,32,0	1/1:18,0:18:2.32:71,2,0	0/0:16,0:16:44.05:0,44,681	0/0:14,0:14:42.05:0,42,742	1/1:22,1:22:14.69:219,15,0	1/1:21,0:20:31.46:284,31,0	0/1:14,0:13:49.28:78,0,49	0/1:9,0:9:14.54:69,0,15	0/1:24,0:24:94.25:94,0,110	0/1:28,0:28:99:122,0,169	0/1:6,0:6:12.38:12,0,32	0/1:6,1:6:7.33:27,0,7	1/1:22,0:22:43.41:180,43,0	1/1:5,1:6:11.96:74,12,0	1/1:22,0:22:36.86:287,37,0	1/1:25,0:23:19.91:252,20,0	1/1:36,3:37:32.92:418,33,0	1/1:5,0:5:14.31:79,14,0
chr10	40059439	.	CTT	C	10267.31	PASS	AB=0.754;AC=46;AF=0.821;AN=56;BaseQRankSum=5.302;DP=539;FS=23.350;HRun=11;HaplotypeScore=120.2247;InbreedingCoeff=0.7202;MQ=61.53;MQ0=4;MQRankSum=-6.092;QD=22.52;ReadPosRankSum=2.713;VQSLOD=2.5975;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,1:20:24.71:0,25,735	1/1:2,8:10:24.04:255,24,0	0/0:32,0:15:30.95:0,31,365	0/1:25,0:14:48.42:63,0,48	1/1:7,22:29:62.31:657,62,0	1/1:6,21:27:63.12:670,63,0	1/1:2,7:9:21.03:223,21,0	1/1:7,15:21:41.61:442,42,0	1/1:1,13:14:36.09:383,36,0	1/1:10,17:27:54.08:564,54,0	1/1:4,19:22:54.08:571,54,0	1/1:2,15:17:41.84:427,42,0	0/0:13,0:16:38.10:0,38,518	0/0:14,0:14:39.13:0,39,593	1/1:5,18:22:57.04:587,57,0	1/1:2,19:20:57.12:597,57,0	1/1:4,9:13:26.79:267,27,0	1/1:2,7:9:18.03:192,18,0	1/1:7,17:24:48.03:511,48,0	1/1:13,15:28:47.96:495,48,0	1/1:4,2:6:5.98:64,6,0	1/1:4,3:6:9.63:104,10,0	1/1:0,21:21:54.13:575,54,0	1/1:2,4:6:14.87:156,15,0	1/1:3,19:22:63.14:665,63,0	1/1:3,22:23:63.15:670,63,0	1/1:7,32:37:95.58:988,96,0	0/1:1,5:6:22.90:142,0,23
chr10	40060236	.	AC	A	1390.69	PASS	AB=0.802;AC=12;AF=0.214;AN=56;BaseQRankSum=16.423;DP=876;FS=137.374;HRun=1;HaplotypeScore=149.3160;InbreedingCoeff=-0.2645;MQ=65.06;MQ0=0;MQRankSum=-14.113;QD=3.43;ReadPosRankSum=4.463;VQSLOD=0.0490;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:57:99:0,159,2464	0/0:14,3:17:15.03:0,15,616	0/0:17,0:17:46.03:0,46,687	0/0:18,0:18:47.05:0,47,634	0/1:37,13:50:66.20:66,0,1218	0/1:29,4:33:7.09:7,0,1080	0/1:26,8:34:99:129,0,932	0/0:30,3:33:8.47:0,8,1234	0/0:28,1:29:46.40:0,46,1156	0/0:30,6:36:53.16:0,53,1358	0/1:14,6:20:99:126,0,476	0/0:30,0:30:75.18:0,75,1163	0/1:30,7:37:99:107,0,1248	0/0:21,0:21:57.09:0,57,854	0/1:32,12:44:99:220,0,1279	0/0:38,3:41:43.62:0,44,1704	0/0:34,1:35:70.50:0,70,1539	0/0:9,1:10:28.65:0,29,425	0/0:27,1:28:46.80:0,47,1256	0/1:24,12:36:99:231,0,884	0/0:39,0:39:99:0,114,1745	0/1:29,11:40:99:247,0,1088	0/1:22,8:30:99:141,0,859	0/0:27,4:31:26.50:0,26,1044	0/1:27,8:35:99:139,0,1057	0/0:25,4:29:53.23:0,53,1078	0/1:31,11:42:99:121,0,1275	0/1:3,1:4:4.07:4,0,132
chr10	40060251	.	C	CAA	1667.51	PASS	AB=0.846;AC=16;AF=0.286;AN=56;BaseQRankSum=15.867;DP=874;FS=135.228;HRun=1;HaplotypeScore=214.7638;InbreedingCoeff=-0.4073;MQ=71.90;MQ0=0;MQRankSum=-14.166;QD=3.32;ReadPosRankSum=0.219;VQSLOD=-0.4551;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,147,2216	0/0:16,1:17:6.13:0,6,600	0/0:28,0:28:76.92:0,77,1079	0/0:21,0:21:57.08:0,57,829	0/1:32,9:42:99:115,0,1008	0/1:27,3:30:32.60:33,0,867	0/1:30,5:35:93.09:93,0,969	0/1:34,5:39:99:153,0,1338	0/0:24,1:25:34.42:0,34,975	0/1:26,6:32:99:153,0,1016	0/1:13,6:19:64.71:65,0,499	0/0:31,0:31:65.64:0,66,1009	0/1:35,5:39:99:118,0,1182	0/0:24,0:24:53.49:0,53,824	0/1:38,10:48:99:243,0,1211	0/0:41,2:43:46.88:0,47,1627	0/0:34,2:36:30.75:0,31,1437	0/1:9,1:10:18.40:18,0,383	0/0:21,1:22:15.94:0,16,785	0/1:29,8:37:99:155,0,1001	0/0:40,1:41:74.56:0,75,1635	0/1:27,9:36:99:175,0,954	0/1:28,5:33:84.01:84,0,904	0/0:28,4:32:35.93:0,36,970	0/1:26,8:34:83.71:84,0,1072	0/1:23,3:26:67.71:68,0,849	0/1:27,9:36:99:231,0,1001	0/1:4,1:5:39.41:39,0,167
chr10	40060769	.	A	AG	868.99	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-7.447;DP=614;FS=1.539;HRun=7;HaplotypeScore=72.2930;InbreedingCoeff=0.9882;MQ=73.98;MQ0=0;MQRankSum=-1.429;QD=28.03;ReadPosRankSum=0.289;VQSLOD=4.2688;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,31:31:81.25:964,81,0	0/0:9,0:9:27.04:0,27,260	0/0:19,0:18:30.96:0,31,255	0/0:13,0:12:19.48:0,19,169	0/0:27,0:27:75.07:0,75,704	0/0:28,0:28:78.06:0,78,727	0/0:16,0:16:39.05:0,39,370	0/0:25,0:27:49.84:0,50,520	0/0:25,0:25:72:0,72,660	0/0:25,0:25:60.05:0,60,560	0/0:30,0:30:74.61:0,75,715	0/0:18,0:18:48.06:0,48,457	0/0:21,0:21:56.88:0,57,533	0/0:19,0:19:54.05:0,54,503	0/0:23,0:23:57.07:0,57,544	0/0:16,0:16:45.06:0,45,430	0/0:24,0:24:69.03:0,69,647	0/0:12,0:12:29.95:0,30,261	0/0:25,0:25:69.01:0,69,637	0/0:27,0:27:77.93:0,78,713	0/0:21,0:21:45.03:0,45,421	0/0:21,0:21:60.05:0,60,564	0/0:31,0:31:66.08:0,66,628	0/0:10,0:10:21.02:0,21,198	0/0:29,0:29:77.94:0,78,716	0/0:21,0:21:42.04:0,42,400	0/0:30,0:30:81.05:0,81,755	0/0:16,0:16:48.04:0,48,454
chr10	40063189	.	G	GA	3513.84	PASS	AB=1.000;AC=34;AF=0.607;AN=56;BaseQRankSum=-1.009;DP=575;FS=3.432;HRun=11;HaplotypeScore=82.8536;InbreedingCoeff=-0.1222;MQ=78.48;MQ0=8;MQRankSum=0.131;QD=6.72;ReadPosRankSum=0.094;VQSLOD=2.3736;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:36,0:36:18.57:62,0,19	1/1:9,0:9:12.56:49,13,0	0/1:33,0:17:3.50:3,0,59	0/1:24,0:15:0.09:0,0,19	0/1:25,0:25:50.95:77,0,51	0/1:19,0:19:32.54:33,0,54	0/1:22,0:21:15.02:76,0,15	1/1:4,24:29:51.43:646,51,0	0/1:22,0:22:37.04:37,0,70	0/1:14,0:14:19.76:20,0,44	0/1:18,0:18:20.32:20,0,20	0/1:22,0:22:15.38:37,0,15	0/0:18,0:18:38.78:0,39,291	0/0:16,0:16:32.85:0,33,254	0/1:15,0:15:17.49:30,0,17	0/0:18,0:18:3.01:0,3,98	0/1:30,0:30:19.35:99,0,19	0/1:21,0:20:31.20:59,0,31	1/1:5,19:25:62.72:541,63,0	1/1:8,19:28:34.94:476,35,0	1/1:4,10:14:24.02:235,24,0	0/1:9,0:9:5.82:6,0,30	0/1:11,0:10:4.71:5,0,34	0/1:16,0:15:15.97:36,0,16	1/1:5,18:23:12.39:284,12,0	1/1:9,13:22:37.55:333,38,0	1/1:11,20:30:17.87:289,18,0	1/1:2,3:5:6.01:61,6,0
chr10	40063200	.	A	AT	4911.17	PASS	AB=0.922;AC=39;AF=0.696;AN=56;BaseQRankSum=-5.063;DP=565;FS=3.202;HRun=10;HaplotypeScore=74.1981;InbreedingCoeff=0.3248;MQ=68.54;MQ0=15;MQRankSum=3.260;QD=10.94;ReadPosRankSum=4.932;VQSLOD=4.2890;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:37:93.40:0,93,698	1/1:0,12:12:23.85:222,24,0	1/1:29,0:11:2.97:20,3,0	0/0:18,0:7:2.42:0,2,13	1/1:3,20:24:47.78:457,48,0	1/1:4,13:17:33.08:346,33,0	1/1:4,17:21:42.32:469,42,0	0/1:31,0:30:29.96:30,0,102	1/1:5,19:24:29.90:313,30,0	1/1:3,11:14:30.04:300,30,0	1/1:1,15:16:29.91:276,30,0	1/1:5,18:23:32.66:332,33,0	0/0:16,0:16:35.12:0,35,268	0/0:14,0:14:35.92:0,36,290	1/1:2,14:16:30.07:314,30,0	1/1:7,10:17:6.09:118,6,0	1/1:5,28:33:41.59:630,42,0	1/1:3,19:21:19.92:385,20,0	0/0:31,0:30:2.35:0,2,139	0/1:23,0:23:24.52:51,0,25	0/1:14,0:15:41.71:44,0,42	1/1:1,8:9:11.34:125,11,0	0/1:2,7:8:2.72:82,0,3	1/1:5,14:17:29.66:293,30,0	0/1:19,0:19:1.87:44,0,2	0/1:20,1:21:30.32:30,0,131	0/1:30,0:29:17.51:18,0,112	1/1:3,0:3:3.85:12,4,0
chr10	40063655	.	AC	A	7565.05	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=14.612;DP=677;FS=0.650;HRun=1;HaplotypeScore=62.3766;InbreedingCoeff=0.9993;MQ=74.25;MQ0=0;MQRankSum=-0.822;QD=39.20;ReadPosRankSum=-1.699;VQSLOD=4.6833;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,99,1577	0/0:7,0:7:21.07:0,21,333	0/0:18,0:17:48.13:0,48,736	0/0:24,0:23:65.95:0,66,998	0/0:26,0:26:78.24:0,78,1218	0/0:16,0:16:48.16:0,48,763	0/0:29,0:29:84.26:0,84,1297	1/1:0,29:29:87.29:1216,87,0	0/0:21,0:21:63.21:0,63,1007	0/0:27,0:27:81.26:0,81,1252	0/0:15,0:15:45.14:0,45,695	0/0:35,0:35:99:0,105,1676	0/0:26,0:26:78.25:0,78,1212	0/0:23,0:23:69.24:0,69,1103	0/0:34,0:34:99:0,102,1559	0/0:31,0:31:93.30:0,93,1458	0/0:30,0:30:81.22:0,81,1232	0/0:21,0:21:63.21:0,63,996	1/1:0,25:25:75.24:1026,75,0	1/1:0,18:18:54.18:750,54,0	1/1:0,26:26:66.22:923,66,0	0/0:20,0:20:57.19:0,57,911	0/0:20,0:20:60.19:0,60,935	0/0:27,0:27:81.28:0,81,1286	1/1:0,24:24:66.22:923,66,0	1/1:0,26:26:78.26:1091,78,0	1/1:0,31:31:74.77:1049,75,0	1/1:0,14:14:42.14:587,42,0
chr10	40064888	.	GA	G	12349.72	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-4.854;DP=635;FS=0.000;HRun=10;HaplotypeScore=72.3304;InbreedingCoeff=0.9728;MQ=72.00;MQ0=0;MQRankSum=-5.134;QD=20.55;ReadPosRankSum=3.969;VQSLOD=5.5530;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,16:23:45.45:392,45,0	1/1:0,13:13:35.99:312,36,0	0/0:21,0:18:11.94:0,12,258	0/0:13,0:13:18.71:0,19,178	1/1:2,26:28:74.96:651,75,0	1/1:4,33:38:61.83:754,62,0	1/1:0,15:15:38.99:339,39,0	1/1:7,33:40:99:866,102,0	1/1:3,13:16:32.99:286,33,0	1/1:5,25:30:68.93:593,69,0	1/1:1,17:18:47.99:416,48,0	1/1:1,17:18:44.99:391,45,0	1/1:1,21:22:59.99:521,60,0	1/1:4,18:22:17.80:383,18,0	1/1:2,26:28:71.98:625,72,0	1/1:3,20:23:47.99:417,48,0	1/1:3,12:15:32.99:286,33,0	1/1:3,12:15:35.98:312,36,0	1/1:2,27:29:80.53:676,81,0	1/1:4,26:30:64.97:593,65,0	1/1:3,14:17:32.98:286,33,0	1/1:4,27:31:71.96:624,72,0	1/1:3,24:27:65.45:572,65,0	1/1:3,19:22:47.99:417,48,0	1/1:1,16:17:38.99:338,39,0	1/1:6,17:23:50.98:443,51,0	1/1:5,28:34:52.83:675,53,0	1/1:0,7:7:21:182,21,0
chr10	40068009	.	AT	A	3092.81	PASS	AB=0.892;AC=18;AF=0.321;AN=56;BaseQRankSum=-3.374;DP=464;FS=5.578;HRun=10;HaplotypeScore=58.7792;InbreedingCoeff=0.8396;MQ=73.62;MQ0=0;MQRankSum=-0.897;QD=16.45;ReadPosRankSum=1.257;VQSLOD=4.1437;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:24.06:0,24,266	0/0:1,0:6:11.36:0,11,57	0/0:12,0:12:14.26:0,14,216	0/1:6,1:7:13.75:14,0,57	0/0:7,0:36:85.35:0,85,432	0/0:12,0:12:33.09:0,33,365	0/0:8,0:8:18.03:0,18,189	1/1:5,15:20:41.95:361,42,0	0/0:16,0:16:42.11:0,42,465	0/0:4,0:18:45.76:0,46,248	0/0:3,0:25:65.63:0,66,352	0/0:17,0:17:39.09:0,39,423	0/0:11,0:11:30.08:0,30,332	0/1:18,2:20:4.05:4,0,394	0/0:1,0:17:42.61:0,43,213	0/0:3,0:20:36.93:0,37,185	0/0:1,0:15:31.25:0,31,156	0/0:1,0:8:17.04:0,17,85	1/1:1,8:9:23.99:208,24,0	1/1:2,27:29:74.96:651,75,0	1/1:1,13:14:29.99:260,30,0	0/0:2,0:13:28.66:0,29,153	0/0:15,0:15:42.11:0,42,464	0/0:15,0:15:33.09:0,33,365	1/1:3,30:33:83.98:729,84,0	1/1:7,15:22:44.98:391,45,0	1/1:4,26:30:51.49:602,51,0	1/1:0,4:4:9:78,9,0
chr10	40068184	.	A	ATG	9436.48	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-0.158;DP=670;FS=0.359;HRun=0;HaplotypeScore=108.6446;InbreedingCoeff=0.9620;MQ=64.21;MQ0=2;MQRankSum=-3.289;QD=21.79;ReadPosRankSum=3.134;VQSLOD=5.1768;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:38.68:0,39,441	1/1:3,0:9:1.47:69,1,0	0/0:23,0:20:26.57:0,27,307	0/0:24,0:23:42.13:0,42,504	1/1:7,1:29:60.02:529,60,0	0/0:19,0:19:42.09:0,42,489	0/0:22,0:22:39.11:0,39,466	1/1:14,23:39:75.20:1109,75,0	0/0:20,0:20:54.09:0,54,610	1/1:10,0:27:50.97:466,51,0	1/1:8,0:32:52.18:399,52,0	0/0:23,0:23:45.14:0,45,553	0/0:15,0:16:41.95:0,42,481	0/0:26,0:26:69.20:0,69,836	1/1:7,0:31:66.03:584,66,0	1/1:3,0:23:51.02:451,51,0	1/1:19,0:32:42.02:390,42,0	1/1:7,0:14:11.02:84,11,0	1/1:9,12:22:39.08:552,39,0	1/1:8,28:36:38.36:1135,38,0	1/1:3,18:21:36.12:587,36,0	1/1:8,0:21:27:236,27,0	0/0:24,0:24:54.17:0,54,659	0/0:23,0:23:51.12:0,51,598	1/1:8,22:30:20.29:843,20,0	1/1:11,25:36:75.17:1124,75,0	1/1:6,14:20:33.11:537,33,0	1/1:0,7:7:21.07:341,21,0
chr10	40070228	.	A	ACTCACT	47475.49	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-10.100;DP=767;FS=0.687;HRun=0;HaplotypeScore=155.7528;InbreedingCoeff=0.9817;MQ=79.65;MQ0=5;MQRankSum=-18.053;QD=79.66;ReadPosRankSum=1.639;VQSLOD=5.4230;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,132,3100	1/1:1,5:6:15.05:539,15,0	0/0:30,0:30:84.16:0,84,1848	0/0:30,0:29:81.28:0,81,1864	1/1:8,32:41:69.24:2474,69,0	1/1:9,27:36:84.29:3009,84,0	1/1:6,9:16:39.13:1335,39,0	1/1:17,23:43:99:3662,111,0	1/1:4,20:27:63.22:2254,63,0	1/1:8,19:30:78.22:2496,78,0	1/1:2,14:17:39.13:1394,39,0	1/1:11,18:30:66.23:2364,66,0	0/0:31,0:31:87.30:0,87,2021	0/0:36,0:36:99:0,102,2377	1/1:6,30:38:90.31:3228,90,0	1/1:4,22:29:66.23:2326,66,0	1/1:2,18:22:45.15:1612,45,0	1/1:0,9:10:24.08:864,24,0	1/1:8,9:17:45.15:1566,45,0	1/1:4,21:26:63.22:2249,63,0	1/1:7,10:22:24.03:862,24,0	1/1:6,21:30:60.21:2144,60,0	1/1:6,25:34:65.90:2368,66,0	1/1:4,14:18:26.69:969,27,0	1/1:3,14:17:48.16:1723,48,0	1/1:9,28:37:99:3734,111,0	1/1:4,33:37:99:3978,111,0	1/1:0,3:6:9.03:324,9,0
chr10	40070712	.	G	GT	3843.21	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-6.664;DP=637;FS=11.772;HRun=6;HaplotypeScore=79.4672;InbreedingCoeff=0.9888;MQ=73.63;MQ0=1;MQRankSum=0.439;QD=30.99;ReadPosRankSum=2.130;VQSLOD=3.4452;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:72.13:0,72,724	0/0:9,0:9:21.05:0,21,214	0/0:34,0:21:33.09:0,33,391	0/0:21,0:17:10.31:0,10,190	0/0:26,0:26:69.14:0,69,696	1/1:3,31:34:87.28:1094,87,0	1/1:0,10:10:21.07:264,21,0	0/0:29,0:29:72.13:0,72,726	1/1:2,17:19:47.89:598,48,0	0/0:24,0:24:66.14:0,66,668	0/0:27,0:27:78.16:0,78,789	1/1:0,13:13:32.88:415,33,0	0/0:28,0:28:75.17:0,75,765	0/0:23,0:23:57.11:0,57,576	0/0:15,0:15:39.08:0,39,392	0/0:24,0:24:69.09:0,69,673	0/0:17,0:17:48.11:0,48,489	0/0:8,0:8:24.05:0,24,245	0/0:29,0:29:75.12:0,75,741	0/0:31,0:31:90.20:0,90,917	0/0:16,0:16:48.09:0,48,482	0/0:20,0:20:54.12:0,54,551	1/1:3,21:24:60.19:754,60,0	1/1:0,24:24:57.18:717,57,0	0/0:28,0:28:72.13:0,72,723	0/0:30,0:30:81.17:0,81,817	0/0:33,0:33:90.15:0,90,891	0/0:13,0:13:39.09:0,39,398
chr10	40072711	.	AG	A	16308.71	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=16.159;DP=801;FS=1.147;HRun=3;HaplotypeScore=78.9655;InbreedingCoeff=0.9750;MQ=80.46;MQ0=0;MQRankSum=-3.419;QD=33.91;ReadPosRankSum=0.049;VQSLOD=5.1451;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,166,2368	1/1:1,10:11:27.08:335,27,0	0/0:17,0:17:51.13:0,51,708	0/0:21,0:21:54.18:0,54,776	1/1:2,24:26:72.23:888,72,0	0/0:21,0:21:60.20:0,60,864	0/0:30,0:30:90.29:0,90,1275	1/1:0,42:42:99:1520,126,0	0/0:22,0:22:66.22:0,66,949	1/1:0,30:30:90.23:1083,90,0	1/1:1,17:18:48.15:593,48,0	0/0:31,0:31:93.24:0,93,1285	0/0:38,0:38:99:0,114,1616	0/0:32,0:32:93.24:0,93,1280	1/1:1,38:39:99:1264,102,0	1/1:1,37:38:56.10:1146,56,0	1/1:1,39:40:99:1374,111,0	1/1:0,15:15:42.13:520,42,0	1/1:1,19:20:57.18:707,57,0	1/1:0,29:29:87.23:1061,87,0	1/1:1,60:61:99:2083,169,0	1/1:1,25:26:63.16:763,63,0	0/0:25,0:25:69.22:0,69,974	0/0:28,0:28:81.26:0,81,1149	1/1:0,20:20:60.19:744,60,0	1/1:1,28:29:81.25:1002,81,0	1/1:1,35:36:96.30:1188,96,0	1/1:0,1:1:3.01:37,3,0
chr10	40074292	.	T	TC	3057.36	PASS	AB=0.960;AC=26;AF=0.464;AN=56;BaseQRankSum=-2.706;DP=490;FS=5.326;HRun=1;HaplotypeScore=96.3545;InbreedingCoeff=0.4331;MQ=55.90;MQ0=36;MQRankSum=2.092;QD=9.32;ReadPosRankSum=7.153;VQSLOD=1.2504;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:22:36.86:0,37,311	1/1:5,0:5:14.20:88,14,0	0/0:30,0:12:26.86:0,27,224	0/0:27,0:8:9.76:0,10,117	1/1:10,0:10:19.59:137,20,0	0/0:8,0:8:20.24:0,20,143	0/0:6,0:5:12.42:0,12,93	0/1:39,0:36:99:161,0,139	0/0:13,0:13:23.27:0,23,157	1/1:14,0:14:35.58:286,36,0	1/1:15,0:14:39.73:236,40,0	0/0:11,0:10:20.96:0,21,170	0/0:13,0:11:29.98:0,30,260	0/0:12,0:11:24.50:0,24,200	1/1:18,0:17:45.82:291,46,0	1/1:27,0:26:70.37:440,70,0	1/1:24,0:21:52.88:357,53,0	0/1:20,0:14:1.40:165,0,1	0/1:26,0:21:27.05:226,0,27	0/1:21,0:20:22.72:123,0,23	1/1:10,0:9:2.05:96,2,0	1/1:19,0:19:43.87:269,44,0	0/0:7,0:6:14.96:0,15,121	0/0:11,0:8:13.71:0,14,107	0/1:18,0:18:21.86:128,0,22	0/1:37,0:34:99:174,0,118	0/1:9,8:14:4.91:33,0,5	0/1:8,0:6:10.22:47,0,10
chr10	40074527	.	C	CT	9223.37	PASS	AB=0.702;AC=49;AF=0.875;AN=56;BaseQRankSum=-5.563;DP=565;FS=3.262;HRun=11;HaplotypeScore=65.8168;InbreedingCoeff=-0.0078;MQ=68.31;MQ0=0;MQRankSum=-1.601;QD=16.32;ReadPosRankSum=0.274;VQSLOD=5.7100;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,20:25:39.08:396,39,0	1/1:4,5:9:9.02:91,9,0	0/1:10,0:12:9.23:9,0,26	0/1:6,0:6:2.15:2,0,32	0/1:8,16:25:17.25:366,0,17	1/1:5,13:18:12.87:329,13,0	1/1:7,16:24:10.47:453,10,0	1/1:12,9:21:6.82:251,7,0	1/1:8,19:27:45.04:445,45,0	1/1:4,13:18:20.55:353,21,0	0/1:10,19:30:23.99:482,0,24	1/1:4,14:19:32.90:315,33,0	0/1:5,15:21:1.55:335,0,2	1/1:2,13:16:12.65:284,13,0	1/1:3,18:21:15.74:327,16,0	1/1:3,24:28:42.75:600,43,0	1/1:7,18:27:27.53:432,28,0	1/1:4,17:21:9.81:273,10,0	1/1:11,12:24:35.21:383,35,0	1/1:4,22:26:52.91:492,53,0	1/1:7,17:25:44.92:441,45,0	1/1:6,17:24:7.23:416,7,0	0/1:9,15:25:25.10:287,0,25	1/1:2,9:11:29.98:291,30,0	1/1:3,7:11:23.62:210,24,0	1/1:5,18:23:51.92:501,52,0	0/1:2,17:19:4.19:323,0,4	1/1:2,4:7:14.87:136,15,0
chr10	40077003	.	T	TGG	4409.73	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-1.070;DP=828;FS=0.431;HRun=2;HaplotypeScore=98.1048;InbreedingCoeff=0.9794;MQ=90.73;MQ0=0;MQRankSum=-2.763;QD=47.42;ReadPosRankSum=2.148;VQSLOD=4.7687;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,135,1965	0/0:10,0:10:30.10:0,30,442	0/0:33,0:33:90.28:0,90,1276	0/0:31,0:31:87.29:0,87,1260	0/0:30,0:30:84.28:0,84,1237	0/0:26,0:26:78.25:0,78,1130	0/0:27,0:27:81.27:0,81,1191	0/0:34,0:34:93.30:0,93,1335	0/0:30,0:30:87.29:0,87,1281	0/0:31,0:31:90.30:0,90,1326	0/0:19,0:19:57.19:0,57,839	1/1:1,29:31:84.24:1538,84,0	0/0:44,0:44:99:0,123,1773	0/0:40,0:40:99:0,117,1722	0/0:41,0:41:99:0,123,1791	0/0:34,0:34:99:0,102,1502	0/0:26,0:26:78.26:0,78,1146	0/0:23,0:23:69.23:0,69,1016	0/0:30,0:30:90.30:0,90,1314	0/0:32,0:32:96.32:0,96,1414	0/0:39,0:39:99:0,111,1612	0/0:28,0:28:84.28:0,84,1235	1/1:1,27:29:81.28:1516,81,0	1/1:0,32:33:74.47:1356,74,0	0/0:23,0:23:69.23:0,69,1015	0/0:29,0:29:87.29:0,87,1281	0/0:24,0:24:69.23:0,69,1016	0/0:3,0:3:9.03:0,9,133
chr10	40079453	.	C	CGTAA	15465.87	PASS	AB=0.926;AC=19;AF=0.339;AN=56;BaseQRankSum=-12.941;DP=742;FS=0.000;HRun=0;HaplotypeScore=114.6056;InbreedingCoeff=0.9155;MQ=76.67;MQ0=0;MQRankSum=-5.475;QD=56.24;ReadPosRankSum=0.657;VQSLOD=6.2418;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,154,2837	1/1:2,9:11:30.03:680,30,0	0/0:15,0:15:45.15:0,45,806	0/0:20,0:20:32.98:0,33,504	1/1:7,25:33:84.07:1846,84,0	0/0:16,0:16:45.15:0,45,839	0/0:25,0:25:72.23:0,72,1284	0/0:37,0:37:90.20:0,90,1508	0/0:23,0:23:66.20:0,66,1184	1/1:7,24:32:87.29:2213,87,0	1/1:1,19:20:50.87:1230,51,0	0/0:20,0:20:57.18:0,57,1031	0/0:28,0:28:81.26:0,81,1479	0/0:27,0:27:75.26:0,75,1392	1/1:4,36:41:99:2737,105,0	1/1:7,29:37:84.29:2163,84,0	1/1:3,25:29:66.23:1759,66,0	1/1:3,8:13:27.09:712,27,0	0/0:28,0:28:72.19:0,72,1301	0/0:27,0:27:72.25:0,72,1329	0/0:39,0:39:99:0,114,2082	1/1:6,27:34:81.23:2041,81,0	0/0:21,0:21:57.18:0,57,1032	0/0:20,0:20:54.19:0,54,999	0/0:28,0:28:81.28:0,81,1504	0/1:23,2:25:84.81:85,0,1211	0/0:35,0:35:99:0,99,1832	0/0:4,0:4:12.04:0,12,224
chr10	40080013	.	CT	C	979.07	PASS	AB=0.667;AC=20;AF=0.357;AN=56;BaseQRankSum=-3.302;DP=525;FS=3.553;HRun=17;HaplotypeScore=79.3166;InbreedingCoeff=0.2195;MQ=68.62;MQ0=3;MQRankSum=1.709;QD=4.13;ReadPosRankSum=5.586;VQSLOD=0.8935;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:17,5:22:7.84:8,0,111	0/0:4,0:9:11.12:0,11,60	0/0:36,0:16:21.06:0,21,108	0/0:24,0:15:7.18:0,7,51	0/0:13,0:30:52.07:0,52,272	0/1:4,11:16:10.58:135,0,11	1/1:3,11:16:30.02:161,30,0	0/1:10,10:21:4.88:88,0,5	0/1:9,3:16:23.07:47,0,23	0/0:30,0:31:54.35:0,54,296	0/0:4,0:16:36.36:0,36,192	0/1:5,8:14:4.35:70,0,4	0/0:29,1:30:28.52:0,29,304	0/0:15,2:17:15.94:0,16,197	0/0:11,0:23:5.74:0,6,30	0/0:20,0:20:41.05:0,41,215	0/0:8,0:19:14.20:0,14,72	0/0:3,0:16:17.40:0,17,101	0/1:15,6:22:9.79:67,0,10	0/1:11,4:17:36.92:54,0,37	1/1:7,2:10:10.20:54,10,0	0/0:10,0:16:29.15:0,29,158	0/1:6,8:15:22.33:80,0,22	1/1:6,3:11:15.55:78,16,0	1/1:1,9:11:16.54:89,17,0	1/1:13,10:23:1.37:105,1,0	0/1:4,10:15:16.41:108,0,16	0/1:3,3:7:13.79:15,0,14
chr10	40080848	.	C	CT	8010.99	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-16.367;DP=695;FS=0.980;HRun=3;HaplotypeScore=60.3496;InbreedingCoeff=0.9993;MQ=85.98;MQ0=0;MQRankSum=0.909;QD=38.51;ReadPosRankSum=-2.160;VQSLOD=4.2334;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:84.26:0,84,1006	0/0:13,0:13:39.11:0,39,456	0/0:26,0:26:64.06:0,64,692	0/0:20,0:20:53.56:0,54,584	0/0:33,0:33:99:0,99,1176	0/0:23,0:23:66.20:0,66,792	0/0:18,0:18:51.13:0,51,589	1/1:1,40:41:99:1517,117,0	0/0:24,0:24:66.19:0,66,782	0/0:35,0:35:99:0,105,1260	0/0:26,0:26:78.24:0,78,936	0/0:23,0:23:69.20:0,69,817	0/0:31,0:31:90.28:0,90,1080	0/0:25,0:25:75.20:0,75,876	0/0:28,0:28:84.25:0,84,999	0/0:34,0:34:99:0,99,1179	0/0:21,0:21:54.12:0,54,620	0/0:18,0:18:54.17:0,54,648	1/1:0,14:14:42.09:535,42,0	1/1:0,31:31:90.30:1260,90,0	1/1:0,18:18:54.18:756,54,0	0/0:21,0:21:60.17:0,60,709	0/0:25,0:25:68.93:0,69,792	0/0:14,0:14:39.12:0,39,468	1/1:0,30:30:81.27:1134,81,0	1/1:1,23:24:69.23:960,69,0	1/1:4,39:41:99:1554,111,0	1/1:0,7:7:21.07:294,21,0
chr10	40081801	.	GTGT	G	2842.60	PASS	AB=0.696;AC=31;AF=0.620;AN=50;BaseQRankSum=11.382;DP=774;FS=1.051;HRun=0;HaplotypeScore=118.1399;InbreedingCoeff=0.7651;MQ=67.95;MQ0=15;MQRankSum=-3.728;QD=6.25;ReadPosRankSum=-0.850;VQSLOD=2.8903;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:38:23.81:168,24,0	0/0:13,0:12:21.06:0,21,367	./.	./.	0/0:27,0:27:24.05:0,24,390	1/1:16,0:28:17.85:125,18,0	1/1:24,0:28:2.98:21,3,0	./.	1/1:11,0:27:32.66:225,33,0	0/0:25,0:25:21.05:0,21,465	0/0:18,0:18:15.05:0,15,258	1/1:15,10:24:24.08:312,24,0	0/1:18,13:31:20.19:303,0,20	1/1:18,14:32:21.07:273,21,0	0/0:37,0:37:57.20:0,57,1081	0/0:32,0:32:53.26:0,53,1178	0/0:21,2:23:0.14:0,0,579	0/0:19,0:18:24.04:0,24,404	1/1:22,0:20:2.98:21,3,0	1/1:18,0:25:8.93:63,9,0	1/1:24,0:33:8.93:63,9,0	0/0:22,0:22:33.11:0,33,625	1/1:7,5:12:12.04:156,12,0	1/1:29,32:61:12.24:800,12,0	1/1:16,0:28:26.78:188,27,0	1/1:15,0:25:20.65:139,21,0	1/1:17,0:26:17.86:126,18,0	1/1:9,0:9:6:54,6,0
chr10	40081980	.	CTTTCTTTTCTTT	C	13855.25	PASS	AB=1.000;AC=35;AF=0.625;AN=56;BaseQRankSum=11.359;DP=539;FS=10.700;HRun=0;HaplotypeScore=189.2743;InbreedingCoeff=0.8329;MQ=59.76;MQ0=6;MQRankSum=-9.663;QD=41.86;ReadPosRankSum=2.259;VQSLOD=3.9466;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:81.71:0,82,4030	1/1:0,4:3:9.03:318,9,0	0/0:29,0:13:30.08:0,30,807	0/0:21,0:12:10.08:0,10,388	1/1:6,22:27:30.05:846,30,0	0/0:20,0:20:42.12:0,42,2172	0/0:13,0:13:18.06:0,18,1053	1/1:19,10:28:29.98:560,30,0	0/0:24,0:24:60.17:0,60,2934	1/1:7,23:30:63.08:1699,63,0	1/1:1,13:14:24.08:780,24,0	0/0:13,0:13:23.96:0,24,996	0/0:16,0:16:45.13:0,45,2401	0/0:21,0:21:51.16:0,51,2704	1/1:6,19:25:51.18:1752,51,0	1/1:7,15:22:30.10:1059,30,0	1/1:5,8:14:10.33:420,10,0	1/1:1,3:4:3.01:106,3,0	1/1:6,9:15:26.97:456,27,0	1/1:6,22:28:44.94:1264,45,0	1/1:13,0:13:5.88:39,6,0	1/1:7,8:15:13.12:440,13,0	0/1:20,0:20:28.36:28,0,1566	0/0:13,0:13:33.10:0,33,1928	1/1:2,15:17:36.12:1271,36,0	1/1:3,25:28:62.93:1546,63,0	1/1:7,15:22:32.64:1164,33,0	1/1:2,1:3:3.01:106,3,0
chr10	40082238	.	GA	G	9609.53	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-6.219;DP=635;FS=0.000;HRun=8;HaplotypeScore=74.6531;InbreedingCoeff=0.9588;MQ=68.06;MQ0=0;MQRankSum=-3.237;QD=24.21;ReadPosRankSum=2.617;VQSLOD=5.5861;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:66.20:0,66,797	1/1:1,15:16:36.06:348,36,0	0/0:19,0:18:39.04:0,39,418	0/0:18,0:17:48.13:0,48,556	1/1:2,27:29:63.09:608,63,0	0/0:0,0:26:60.38:0,60,307	0/0:1,0:16:40.39:0,40,226	1/1:4,21:25:60.09:576,60,0	0/0:2,0:18:34.41:0,34,175	1/1:2,28:30:84.13:811,84,0	1/1:2,25:27:69.10:666,69,0	0/0:4,0:30:75.60:0,76,381	0/0:29,0:30:90.13:0,90,1049	0/0:22,0:22:66.19:0,66,786	1/1:4,25:29:72.11:695,72,0	1/1:2,30:32:87.14:840,87,0	1/1:0,15:15:42.07:406,42,0	1/1:3,13:16:36.05:348,36,0	1/1:3,16:17:42.05:400,42,0	1/1:4,28:32:75.11:724,75,0	1/1:5,24:29:63.09:608,63,0	1/1:1,13:14:39.06:377,39,0	0/0:2,1:14:2.74:0,3,117	0/0:4,0:20:54.79:0,55,296	1/1:0,17:17:42.07:406,42,0	1/1:1,25:26:75.12:724,75,0	1/1:2,37:39:99:1014,105,0	1/1:0,2:2:6.01:58,6,0
chr10	40083003	.	G	GA	17452.92	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-14.102;DP=663;FS=9.525;HRun=6;HaplotypeScore=64.6014;InbreedingCoeff=0.9979;MQ=89.30;MQ0=0;MQRankSum=-5.016;QD=32.87;ReadPosRankSum=3.376;VQSLOD=4.7691;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:66.15:0,66,672	1/1:0,6:6:18.06:226,18,0	0/0:25,0:25:51.08:0,51,509	0/0:30,0:30:59.30:0,59,558	1/1:4,27:31:78.25:981,78,0	1/1:2,24:26:66.18:813,66,0	1/1:0,13:13:30.10:377,30,0	1/1:3,19:21:57.17:704,57,0	1/1:0,17:17:45.14:566,45,0	1/1:0,22:22:66.21:830,66,0	1/1:1,21:22:63.20:793,63,0	1/1:2,21:23:60.19:755,60,0	0/0:25,0:25:69.15:0,69,703	0/0:28,0:28:81.17:0,81,820	1/1:1,17:18:51.16:641,51,0	1/1:1,32:33:78.25:981,78,0	1/1:1,19:20:48.15:604,48,0	1/1:1,17:18:51.12:624,51,0	1/1:0,21:21:60.18:742,60,0	1/1:2,27:29:81.18:976,81,0	1/1:3,19:22:57.18:715,57,0	1/1:5,32:37:84.27:1057,84,0	1/1:1,25:26:59.68:754,60,0	1/1:1,18:19:54.17:679,54,0	1/1:2,21:23:63.20:793,63,0	1/1:2,23:25:69.20:844,69,0	1/1:0,46:46:99:1585,126,0	1/1:1,11:12:33.11:412,33,0
chr10	40086551	.	A	AG	16160.85	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-17.470;DP=597;FS=0.000;HRun=0;HaplotypeScore=77.0941;InbreedingCoeff=0.9996;MQ=91.63;MQ0=0;MQRankSum=-2.939;QD=43.92;ReadPosRankSum=2.453;VQSLOD=5.2377;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:69.20:0,69,945	1/1:0,8:8:24.08:384,24,0	0/0:26,0:26:74.49:0,74,874	0/0:23,0:23:44.77:0,45,679	1/1:0,19:19:51.17:815,51,0	0/0:25,0:25:69.23:0,69,965	0/0:13,0:13:39.13:0,39,545	1/1:0,33:33:99:1535,99,0	0/0:16,0:16:45.15:0,45,629	1/1:2,19:21:60.18:933,60,0	1/1:1,17:18:42.14:671,42,0	0/0:22,0:22:66.21:0,66,905	0/0:22,0:22:63.21:0,63,881	0/0:26,0:26:72.24:0,72,1006	1/1:0,31:31:87.30:1391,87,0	1/1:0,32:32:96.33:1535,96,0	1/1:0,21:21:57.19:911,57,0	1/1:0,20:20:60.20:959,60,0	1/1:0,21:21:60.14:947,60,0	1/1:0,22:22:60.20:959,60,0	1/1:0,18:18:51.17:815,51,0	1/1:0,19:19:48.16:765,48,0	0/0:17,0:17:45.15:0,45,628	0/0:12,0:12:33.09:0,33,443	1/1:1,19:20:45.15:719,45,0	1/1:0,26:26:78.22:1193,78,0	1/1:1,25:26:66.23:1053,66,0	1/1:0,12:12:36.12:575,36,0
chr10	40088059	.	T	TG	2257.84	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=5.781;DP=418;FS=8.031;HRun=1;HaplotypeScore=89.6742;InbreedingCoeff=0.7692;MQ=74.91;MQ0=23;MQRankSum=-8.337;QD=20.91;ReadPosRankSum=-5.295;VQSLOD=1.7630;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:38:99:0,114,1476	1/1:2,0:2:5.99:66,6,0	0/0:39,0:20:51.15:0,51,639	0/0:39,0:24:66.20:0,66,830	1/1:5,3:7:3.01:44,3,0	0/0:32,0:31:87.28:0,87,1122	0/0:22,0:22:66.17:0,66,838	1/1:3,7:8:22.57:234,23,0	0/0:17,0:17:51.16:0,51,658	1/1:7,4:11:24.08:341,24,0	1/1:4,2:6:3.01:45,3,0	0/0:27,0:26:72.23:0,72,934	0/0:30,0:30:90.29:0,90,1167	0/0:25,0:25:66.21:0,66,855	1/1:7,0:6:12.04:162,12,0	1/1:9,1:10:2.08:229,2,0	1/1:5,1:6:3.01:42,3,0	1/1:3,0:3:9.03:131,9,0	1/1:4,0:3:6.02:85,6,0	1/1:1,3:4:6.02:90,6,0	1/1:2,2:4:3.01:45,3,0	1/1:3,4:7:12.04:179,12,0	0/0:18,0:17:51.17:0,51,661	0/0:21,0:20:57.19:0,57,740	1/1:0,1:1:2.98:21,3,0	1/1:6,5:11:33.11:473,33,0	1/1:6,3:9:4.73:94,5,0	1/1:1,4:5:12.04:179,12,0
chr10	40089381	.	GAA	G	3008.49	PASS	AB=0.712;AC=44;AF=0.786;AN=56;BaseQRankSum=-0.111;DP=469;FS=0.000;HRun=16;HaplotypeScore=72.6690;InbreedingCoeff=0.2401;MQ=47.28;MQ0=21;MQRankSum=2.109;QD=6.93;ReadPosRankSum=3.159;VQSLOD=-0.0353;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:20,3:45:10.42:10,0,222	1/1:4,0:7:6.28:26,6,0	0/0:5,0:1:2.74:0,3,12	0/0:4,0:2:3:0,3,25	1/1:4,0:12:15.80:65,16,0	1/1:9,12:20:17.92:192,18,0	1/1:2,9:13:32.34:249,32,0	1/1:10,12:22:16.80:203,17,0	1/1:4,8:12:9.52:96,10,0	1/1:6,2:19:33.47:172,33,0	1/1:4,1:13:17.52:86,18,0	1/1:6,6:12:11.33:138,11,0	0/0:18,1:25:4.42:0,4,240	0/1:13,0:18:22.34:22,0,138	1/1:0,0:18:24.45:103,24,0	1/1:2,0:18:24.95:118,25,0	1/1:10,1:24:29.57:127,30,0	1/1:6,0:20:41.07:175,41,0	0/1:9,3:11:2.02:62,0,2	0/1:16,5:24:12.06:152,0,12	0/1:7,2:10:3.39:58,0,3	1/1:5,1:8:10.29:57,10,0	1/1:3,16:18:30.34:259,30,0	1/1:6,4:8:17.70:133,18,0	1/1:7,4:12:14.51:111,15,0	1/1:14,9:22:27.92:233,28,0	1/1:5,12:18:23.84:242,24,0	0/1:3,5:6:25.77:63,0,26
chr10	40089395	.	AAAG	A	288.94	PASS	AB=0.995;AC=9;AF=0.161;AN=56;BaseQRankSum=9.113;DP=565;FS=3.116;HRun=0;HaplotypeScore=98.2478;InbreedingCoeff=-0.0407;MQ=51.18;MQ0=17;MQRankSum=-4.056;QD=1.71;ReadPosRankSum=7.367;VQSLOD=0.5272;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:90.15:0,90,773	1/1:3,0:3:7.81:34,8,0	0/0:9,0:5:11.17:0,11,104	0/0:9,0:6:8.93:0,9,92	0/0:31,0:31:10.02:0,10,429	0/0:16,0:14:25.10:0,25,104	0/0:15,1:16:11.37:0,11,116	0/0:34,0:34:54.44:0,54,583	0/0:15,0:15:22.23:0,22,126	0/1:27,0:27:59.28:59,0,263	0/1:15,0:14:17.50:17,0,79	0/0:20,1:21:2.69:0,3,254	0/0:24,1:25:6.84:0,7,445	0/0:18,0:17:8.87:0,9,305	0/1:28,0:27:67.97:68,0,158	0/1:26,0:26:58.62:59,0,174	0/1:34,0:30:61.86:62,0,159	0/1:24,1:24:70.60:93,0,71	0/0:15,0:14:17.37:0,17,230	0/0:29,0:29:3.81:0,4,331	0/0:13,0:11:12.87:0,13,167	0/1:11,0:11:35.25:35,0,104	0/0:21,0:20:13.41:0,13,122	0/0:15,0:12:0.76:0,1,110	0/0:12,0:12:12.75:0,13,130	0/0:22,0:20:23.24:0,23,275	0/0:21,0:20:44.57:0,45,256	0/0:9,0:8:16.69:0,17,111
chr10	40090506	.	CTG	C	5503.77	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=12.546;DP=750;FS=6.810;HRun=0;HaplotypeScore=95.2540;InbreedingCoeff=0.9956;MQ=88.20;MQ0=2;MQRankSum=-1.574;QD=35.74;ReadPosRankSum=4.257;VQSLOD=7.0899;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:72.25:0,72,1296	0/0:7,0:7:21.07:0,21,378	0/0:35,0:35:60.90:0,61,1410	0/0:42,0:38:63.18:0,63,1185	0/0:36,0:36:93.10:0,93,1633	1/1:1,28:29:78.26:1092,78,0	1/1:0,30:30:72.24:1008,72,0	0/0:35,0:35:99:0,99,1777	1/1:0,27:26:75.25:1050,75,0	0/0:27,0:27:72.24:0,72,1271	0/0:25,0:25:72.22:0,72,1228	1/1:1,27:28:69.23:966,69,0	0/0:41,0:41:99:0,120,2137	0/0:22,0:22:63.22:0,63,1119	0/0:30,0:30:81.26:0,81,1423	0/0:26,0:26:72.22:0,72,1238	0/0:27,0:27:78.25:0,78,1369	0/0:8,0:8:24.08:0,24,426	0/0:23,0:23:69.24:0,69,1225	0/0:24,0:24:69.04:0,69,1171	0/0:34,0:34:99:0,99,1777	0/0:24,0:24:66.23:0,66,1164	1/1:1,19:19:48.16:672,48,0	1/1:2,18:20:51.17:714,51,0	0/0:26,0:26:75.26:0,75,1342	0/0:36,0:36:99:0,99,1756	0/0:38,0:37:99:0,105,1836	0/0:5,0:5:15.05:0,15,270
chr10	40091852	.	C	CTT	3872.88	PASS	AB=0.666;AC=40;AF=0.714;AN=56;BaseQRankSum=-0.464;DP=561;FS=8.964;HRun=14;HaplotypeScore=79.2981;InbreedingCoeff=0.4275;MQ=71.42;MQ0=3;MQRankSum=-0.167;QD=8.86;ReadPosRankSum=0.159;VQSLOD=1.2832;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:28:23.26:0,23,315	1/1:2,0:4:5.21:18,5,0	0/0:33,0:14:16.85:0,17,79	0/0:25,1:17:12.98:0,13,95	1/1:10,0:27:9.06:99,9,0	1/1:6,13:21:3.49:261,3,0	1/1:5,8:15:14.35:134,14,0	1/1:19,10:32:33.43:297,33,0	1/1:6,1:23:20.25:196,20,0	0/1:5,1:20:19.94:124,0,20	1/1:11,0:11:11.33:89,11,0	1/1:6,1:11:20.03:172,20,0	0/0:20,0:21:35.43:0,35,340	0/0:11,0:15:25.94:0,26,179	1/1:15,1:27:14.82:171,15,0	0/1:6,0:25:4.60:41,0,5	0/1:19,0:24:11.30:73,0,11	0/1:16,2:31:16.99:171,0,17	1/1:13,2:17:21.49:232,21,0	1/1:8,17:28:28.21:459,28,0	1/1:3,4:7:6.02:79,6,0	0/1:10,0:14:19.13:19,0,52	1/1:13,0:13:19.69:171,20,0	1/1:5,0:6:8.38:75,8,0	0/1:6,16:22:2.15:195,0,2	1/1:7,14:23:42.17:370,42,0	1/1:12,15:30:26.42:362,26,0	1/1:2,0:4:6.01:68,6,0
chr10	40093353	.	AT	A	2559.30	PASS	AB=0.848;AC=21;AF=0.375;AN=56;BaseQRankSum=0.917;DP=615;FS=6.214;HRun=13;HaplotypeScore=79.6997;InbreedingCoeff=0.6526;MQ=72.11;MQ0=1;MQRankSum=1.342;QD=9.73;ReadPosRankSum=2.909;VQSLOD=3.2014;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,2:33:59.07:0,59,713	1/1:1,17:18:47.70:350,48,0	0/1:17,1:17:1.79:2,0,123	0/1:15,0:12:20.96:21,0,47	1/1:3,20:25:31.35:376,31,0	0/0:22,1:26:43.54:0,44,531	0/1:13,3:16:29.20:29,0,227	0/0:10,0:32:62.10:0,62,335	0/0:18,0:19:41.18:0,41,415	0/1:8,11:24:9.42:221,0,9	1/1:4,15:20:37.76:268,38,0	0/0:24,0:24:51.03:0,51,487	0/0:22,1:23:34.99:0,35,463	0/0:12,1:13:11.14:0,11,270	1/1:5,18:24:26.53:349,27,0	1/1:7,21:28:33.42:407,33,0	1/1:5,16:22:17.58:283,18,0	1/1:3,12:16:34.82:247,35,0	0/0:10,0:25:31.82:0,32,269	0/0:18,0:32:68.65:0,69,410	0/0:8,0:20:40.10:0,40,229	1/1:5,8:14:28.78:201,29,0	0/1:19,4:23:11.79:12,0,375	0/0:19,1:20:35.15:0,35,492	0/0:5,0:16:20.05:0,20,114	0/0:5,0:25:63.14:0,63,354	0/0:5,0:20:40.26:0,40,244	0/0:3,0:23:57.09:0,57,304
chr10	40093549	.	ATT	A	3693.46	PASS	AB=0.933;AC=17;AF=0.304;AN=56;BaseQRankSum=-0.296;DP=548;FS=0.000;HRun=13;HaplotypeScore=80.4380;InbreedingCoeff=0.8717;MQ=67.73;MQ0=1;MQRankSum=0.902;QD=20.29;ReadPosRankSum=-0.375;VQSLOD=2.9743;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:31:66.16:0,66,295	0/0:8,0:8:18.05:0,18,243	0/1:13,1:12:11.84:12,0,156	0/0:12,0:11:20.30:0,20,194	0/0:22,0:28:67.38:0,67,771	0/0:7,1:27:27.32:0,27,203	0/0:6,0:26:44.92:0,45,154	1/1:9,27:36:78.01:751,78,0	0/0:6,1:16:2.36:0,2,100	0/0:18,0:20:45.12:0,45,576	0/0:30,0:33:89.70:0,90,1131	0/0:3,0:11:17.47:0,17,60	0/0:5,1:20:9.86:0,10,143	0/0:3,0:12:25.45:0,25,103	0/0:20,1:22:30.57:0,31,742	0/0:18,0:18:42.13:0,42,590	0/0:21,0:24:57.15:0,57,774	0/0:12,0:14:27.07:0,27,346	1/1:7,4:11:14.18:118,14,0	1/1:8,21:29:53.65:622,54,0	1/1:1,7:9:23.78:215,24,0	0/0:11,0:16:41.56:0,42,489	0/0:5,0:19:35.47:0,35,152	0/0:1,0:9:17.47:0,17,60	1/1:3,21:24:60.06:582,60,0	1/1:3,18:21:51:489,51,0	1/1:4,27:32:74.70:758,75,0	1/1:1,5:6:15.02:145,15,0
chr10	40095893	.	GA	G	1971.05	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=9.058;DP=658;FS=4.384;HRun=10;HaplotypeScore=66.5396;InbreedingCoeff=0.9014;MQ=62.39;MQ0=30;MQRankSum=-0.322;QD=16.16;ReadPosRankSum=2.293;VQSLOD=4.2451;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,1:34:58.18:0,58,859	0/0:7,0:8:20.89:0,21,213	0/0:34,1:14:6.18:0,6,227	0/0:22,1:11:4.57:0,5,164	0/0:28,0:27:57.10:0,57,597	1/1:2,15:16:38.99:338,39,0	1/1:4,18:20:41.99:365,42,0	0/0:27,1:26:37.11:0,37,631	1/1:4,10:12:26.99:234,27,0	0/0:37,1:37:70.46:0,70,958	0/0:13,1:14:39.11:0,39,430	1/1:2,18:19:41.99:365,42,0	0/0:15,0:15:39.11:0,39,431	0/0:17,1:16:16.09:0,16,405	0/0:16,0:15:33.09:0,33,365	0/0:21,2:23:5.05:0,5,512	0/0:31,1:32:49.06:0,49,744	0/0:29,0:28:65.86:0,66,680	0/0:33,1:32:81.20:0,81,874	0/0:30,0:29:75.19:0,75,821	0/0:14,0:14:39.09:0,39,423	0/0:24,0:24:51.14:0,51,564	1/1:4,14:17:33.63:308,34,0	1/1:7,24:28:62.98:547,63,0	0/0:23,2:25:17.07:0,17,643	0/0:20,3:22:5.08:0,5,490	0/0:20,0:20:51.11:0,51,552	0/0:23,0:22:60.14:0,60,648
chr10	40096313	.	TG	T	4390.44	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=11.877;DP=762;FS=3.734;HRun=4;HaplotypeScore=68.9743;InbreedingCoeff=1.0000;MQ=81.70;MQ0=0;MQRankSum=-1.775;QD=30.92;ReadPosRankSum=3.057;VQSLOD=5.5511;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,144,2016	0/0:15,0:15:42.14:0,42,588	0/0:19,0:19:48.15:0,48,644	0/0:21,0:21:48.15:0,48,648	0/0:35,0:35:96.30:0,96,1309	1/1:2,29:31:81.25:972,81,0	1/1:1,17:18:42.13:504,42,0	0/0:38,0:38:98.68:0,99,1322	1/1:0,21:21:54.17:648,54,0	0/0:30,0:30:84.27:0,84,1161	0/0:28,0:28:81.24:0,81,1112	1/1:1,29:30:75.23:899,75,0	0/0:28,0:28:81.23:0,81,1097	0/0:35,0:35:99:0,105,1467	0/0:36,0:36:99:0,105,1419	0/0:36,0:36:99:0,105,1436	0/0:24,0:24:69.15:0,69,905	0/0:21,0:21:57.19:0,57,795	0/0:17,0:17:48.14:0,48,654	0/0:27,0:27:78.25:0,78,1073	0/0:25,0:25:69.17:0,69,911	0/0:30,0:30:87.28:0,87,1202	1/1:0,16:16:45.14:540,45,0	1/1:0,26:26:69.21:828,69,0	0/0:16,0:16:45.15:0,45,624	0/0:36,0:36:99:0,102,1428	0/0:35,0:35:99:0,105,1452	0/0:19,0:19:54.18:0,54,756
chr10	40097875	.	AT	A	4635.71	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=17.424;DP=723;FS=6.821;HRun=1;HaplotypeScore=108.3184;InbreedingCoeff=0.9770;MQ=74.56;MQ0=0;MQRankSum=-16.438;QD=33.59;ReadPosRankSum=-0.652;VQSLOD=3.9067;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:63.21:0,63,1007	0/0:10,0:10:30.08:0,30,454	0/0:20,0:20:57.19:0,57,909	0/0:10,0:10:5.55:0,6,316	0/0:36,0:36:99:0,108,1724	1/1:1,21:22:66.20:794,66,0	1/1:1,16:17:48.13:565,48,0	0/0:32,0:32:96.31:0,96,1473	1/1:0,27:27:81.25:990,81,0	0/0:41,0:41:99:0,123,1951	0/0:32,0:32:96.33:0,96,1529	1/1:0,35:35:99:1187,99,0	0/0:36,0:36:99:0,108,1699	0/0:25,0:25:75.26:0,75,1199	0/0:36,0:36:99:0,108,1676	0/0:32,0:32:96.33:0,96,1532	0/0:31,0:31:93.32:0,93,1484	0/0:19,0:19:57.19:0,57,907	0/0:17,0:17:48.15:0,48,744	0/0:31,0:31:93.30:0,93,1461	0/0:22,0:22:66.23:0,66,1055	0/0:27,0:27:81.28:0,81,1295	1/1:0,22:22:63.19:746,63,0	1/1:2,13:15:30.09:353,30,0	0/0:25,0:25:75.26:0,75,1197	0/0:22,0:22:66.23:0,66,1056	0/0:46,0:45:99:0,138,2134	0/0:13,0:13:39.13:0,39,624
chr10	40097878	.	ACTT	A	6438.84	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=17.582;DP=728;FS=7.546;HRun=0;HaplotypeScore=132.2664;InbreedingCoeff=0.9995;MQ=74.40;MQ0=0;MQRankSum=-16.884;QD=46.66;ReadPosRankSum=-0.573;VQSLOD=6.4054;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:63.19:0,63,1501	0/0:9,0:9:27.09:0,27,665	0/0:20,0:20:57.18:0,57,1276	0/0:10,0:10:27.07:0,27,557	0/0:37,0:37:99:0,108,2656	1/1:2,21:23:69.21:1124,69,0	1/1:0,16:16:45.15:746,45,0	0/0:33,0:33:99:0,99,2367	1/1:1,26:27:81.28:1358,81,0	0/0:41,0:41:99:0,123,3002	0/0:32,0:32:96.30:0,96,2232	1/1:2,32:34:99:1661,102,0	0/0:34,0:34:99:0,102,2460	0/0:25,0:25:75.24:0,75,1770	0/0:36,0:36:99:0,108,2604	0/0:32,0:32:96.33:0,96,2316	0/0:32,0:32:93.32:0,93,2209	0/0:20,0:20:60.21:0,60,1467	0/0:17,0:17:51.14:0,51,1200	0/0:30,0:30:90.23:0,90,2012	0/0:23,0:23:69.24:0,69,1666	0/0:29,0:29:87.30:0,87,2127	1/1:3,20:23:66.22:1063,66,0	1/1:4,11:15:30.10:487,30,0	0/0:26,0:26:78.27:0,78,1915	0/0:23,0:23:69.24:0,69,1680	0/0:46,0:45:99:0,138,3351	0/0:13,0:13:39.13:0,39,961
chr10	40098656	.	G	GT	5483.58	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=4.823;DP=690;FS=1.494;HRun=7;HaplotypeScore=85.3334;InbreedingCoeff=0.9994;MQ=76.03;MQ0=0;MQRankSum=-0.468;QD=29.96;ReadPosRankSum=0.608;VQSLOD=4.9512;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:77.40:0,77,730	0/0:16,0:16:45.01:0,45,419	0/0:18,0:18:23.99:0,24,223	0/0:13,0:12:29.91:0,30,267	0/0:27,0:27:72.10:0,72,691	0/0:18,0:18:51.07:0,51,489	0/0:20,0:20:57.08:0,57,544	1/1:4,19:23:57.14:662,57,0	0/0:28,0:28:69.07:0,69,655	0/0:30,0:30:78.12:0,78,753	0/0:20,0:20:47.85:0,48,447	0/0:35,0:35:99:0,102,985	0/0:29,0:29:72.09:0,72,690	0/0:23,0:23:63.10:0,63,608	0/0:30,0:30:75.09:0,75,718	0/0:37,0:37:99:0,102,985	0/0:35,0:35:90.09:0,90,853	0/0:27,0:27:78.09:0,78,745	1/1:1,15:16:45.13:532,45,0	1/1:2,19:21:57.17:689,57,0	1/1:3,23:26:63.19:761,63,0	0/0:19,0:19:48.03:0,48,446	0/0:24,0:24:72.10:0,72,689	0/0:27,0:27:78.11:0,78,748	1/1:5,27:32:78.24:942,78,0	1/1:7,27:34:29.31:921,29,0	1/1:1,19:20:51.16:614,51,0	1/1:1,10:11:30.09:362,30,0
chr10	40099393	.	T	TACGCACGCACGCACGC	18501.55	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=1.618;DP=634;FS=4.128;HRun=0;HaplotypeScore=271.0447;InbreedingCoeff=0.7690;MQ=69.51;MQ0=0;MQRankSum=-10.221;QD=38.54;ReadPosRankSum=-2.927;VQSLOD=3.7245;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:60.17:0,60,2235	1/1:9,0:9:3.01:45,3,0	0/0:29,0:28:33.06:0,33,826	0/0:27,0:26:30.10:0,30,802	1/1:7,5:13:11.67:685,12,0	1/1:24,0:24:21.02:744,21,0	1/1:31,4:36:30.10:1984,30,0	1/1:18,0:18:21.06:696,21,0	1/1:16,7:24:21.07:1595,21,0	1/1:12,0:12:18.06:908,18,0	1/1:11,0:11:3.01:127,3,0	1/1:35,0:44:21.54:1329,22,0	0/0:29,0:29:66.21:0,66,2722	0/0:24,0:24:54.19:0,54,2374	1/1:11,6:19:12.04:911,12,0	1/1:23,0:23:27.08:1386,27,0	1/1:29,6:38:39.13:2535,39,0	1/1:19,3:22:12.04:911,12,0	1/1:11,0:14:21.05:720,21,0	1/1:12,0:12:12:282,12,0	1/1:47,0:45:24.83:608,25,0	1/1:4,2:6:6.02:456,6,0	1/1:11,0:13:3.48:210,3,0	1/1:30,0:30:6.02:86,6,0	1/1:19,0:25:18.06:1253,18,0	1/1:9,0:9:6.02:264,6,0	1/1:18,0:18:9.03:350,9,0	1/1:9,0:12:6.02:418,6,0
chr10	40099583	.	G	GCTTA	12253.54	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-13.586;DP=565;FS=14.392;HRun=0;HaplotypeScore=84.0674;InbreedingCoeff=0.9986;MQ=79.77;MQ0=0;MQRankSum=-5.045;QD=66.60;ReadPosRankSum=-2.492;VQSLOD=5.6197;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:60.21:0,60,1120	0/0:7,0:7:18.06:0,18,336	0/0:24,0:24:54.18:0,54,985	0/0:19,0:19:48.16:0,48,822	0/0:15,0:15:42.14:0,42,772	0/0:27,0:27:75.26:0,75,1388	0/0:22,0:22:60.21:0,60,1109	1/1:9,31:41:99:2637,108,0	0/0:14,0:14:42.14:0,42,784	0/0:14,0:14:39.12:0,39,686	0/0:14,0:14:36.12:0,36,672	0/0:30,0:30:84.29:0,84,1551	0/0:18,0:18:42.14:0,42,757	0/0:30,0:30:90.31:0,90,1680	0/0:15,0:15:42.14:0,42,784	0/0:23,0:23:69.24:0,69,1271	0/0:24,0:24:69.24:0,69,1280	0/0:18,0:18:54.19:0,54,1008	1/1:3,15:18:48.16:1250,48,0	1/1:1,16:17:51.17:1230,51,0	1/1:3,21:24:48.16:1237,48,0	0/0:17,0:17:48.16:0,48,874	0/0:15,0:15:42.13:0,42,752	0/0:14,0:14:39.13:0,39,728	1/1:3,14:17:42.14:1033,42,0	1/1:2,24:27:78.27:1969,78,0	1/1:6,19:24:69.24:1820,69,0	1/1:1,14:15:42.14:1077,42,0
chr10	40100184	.	A	AC	6208.41	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-2.131;DP=544;FS=6.727;HRun=2;HaplotypeScore=77.0865;InbreedingCoeff=0.9691;MQ=63.02;MQ0=7;MQRankSum=-2.685;QD=18.81;ReadPosRankSum=-0.294;VQSLOD=4.4072;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:80.85:0,81,662	1/1:8,0:8:20.85:165,21,0	0/0:36,0:17:23.63:0,24,257	0/0:24,0:18:40.13:0,40,341	1/1:15,0:14:38.94:327,39,0	0/0:12,0:12:26.80:0,27,210	0/0:14,0:14:29.67:0,30,238	1/1:23,4:27:59.32:487,59,0	0/0:13,0:13:26.97:0,27,223	1/1:19,0:19:47.50:407,48,0	1/1:13,0:13:29.96:256,30,0	0/0:16,0:16:32.93:0,33,275	0/0:18,0:18:45.40:0,45,376	0/0:17,0:17:41.95:0,42,351	1/1:21,0:20:47.98:414,48,0	1/1:16,0:16:35.98:324,36,0	1/1:25,0:25:65.86:551,66,0	1/1:14,0:14:35.46:281,35,0	1/1:2,17:19:47.91:396,48,0	1/1:25,0:25:68.52:557,69,0	1/1:26,0:25:62.50:517,62,0	1/1:1,12:13:11.81:80,12,0	0/0:15,0:15:35.99:0,36,310	0/0:15,0:15:38.91:0,39,327	1/1:15,0:15:35.92:304,36,0	1/1:27,0:27:68.88:590,69,0	1/1:2,17:18:3.01:41,3,0	1/1:28,0:28:65.54:512,66,0
chr10	40104221	.	CA	C	12500.39	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=9.764;DP=744;FS=3.039;HRun=2;HaplotypeScore=95.2044;InbreedingCoeff=0.9989;MQ=84.06;MQ0=0;MQRankSum=-3.878;QD=34.72;ReadPosRankSum=0.411;VQSLOD=4.9028;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:57:99:0,166,2453	0/0:13,0:13:39.13:0,39,583	0/0:24,0:24:72.24:0,72,1038	0/0:19,0:19:57.19:0,57,853	0/0:37,0:37:99:0,111,1643	1/1:0,16:16:45.15:584,45,0	1/1:0,21:21:51.17:662,51,0	1/1:2,26:28:75.19:926,75,0	1/1:1,30:31:36.30:968,36,0	0/0:23,0:23:69.23:0,69,1027	0/0:21,0:21:63.21:0,63,937	1/1:0,31:31:81.26:1051,81,0	0/0:33,0:33:96.33:0,96,1438	0/0:15,0:15:45.15:0,45,674	0/0:25,0:25:72.24:0,72,1079	0/0:33,0:33:99:0,99,1464	0/0:35,0:35:96.31:0,96,1414	0/0:19,0:19:57.19:0,57,854	1/1:0,31:31:90.25:1124,90,0	1/1:1,31:32:84.27:1091,84,0	1/1:0,30:30:84.27:1089,84,0	0/0:30,0:30:90.30:0,90,1331	1/1:1,21:22:54.18:700,54,0	1/1:0,26:26:78.25:1013,78,0	1/1:0,30:30:87.28:1130,87,0	1/1:1,20:21:18.16:685,18,0	1/1:2,28:30:81.26:1050,81,0	1/1:0,11:11:33.11:428,33,0
chr10	40106583	.	GA	G	8447.39	PASS	AB=0.571;AC=33;AF=0.589;AN=56;BaseQRankSum=-15.021;DP=688;FS=1.081;HRun=10;HaplotypeScore=93.8948;InbreedingCoeff=0.8895;MQ=71.49;MQ0=0;MQRankSum=-1.275;QD=19.24;ReadPosRankSum=4.219;VQSLOD=5.2561;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,21:26:50.64:427,51,0	0/0:2,0:7:8.52:0,9,43	0/0:20,1:17:3.85:0,4,248	0/0:20,0:19:17.78:0,18,227	0/0:3,0:20:49.18:0,49,281	1/1:5,27:32:68.98:599,69,0	1/1:2,18:21:41.03:345,41,0	1/1:4,22:28:70.89:586,71,0	1/1:2,28:30:65.98:573,66,0	0/0:7,0:23:45.86:0,46,255	0/0:3,0:19:45.78:0,46,253	1/1:4,31:35:86.97:755,87,0	1/1:1,25:26:53.39:468,53,0	1/1:2,28:30:71.98:625,72,0	0/0:7,0:39:77.31:0,77,437	0/0:8,1:24:19.86:0,20,211	0/0:7,0:22:46.07:0,46,282	0/0:8,0:35:77.46:0,77,444	1/1:4,14:18:11.73:315,12,0	1/1:1,20:21:59.89:510,60,0	1/1:0,19:21:55.06:455,55,0	0/0:5,0:19:43.21:0,43,253	1/1:3,22:25:59.24:516,59,0	1/1:1,29:30:86.98:755,87,0	1/1:0,19:19:29.99:260,30,0	1/1:3,25:29:30.43:573,30,0	1/1:5,23:28:53.98:469,54,0	0/1:5,14:20:17.53:217,0,18
chr10	40107263	.	CT	C	1850.74	PASS	AB=0.763;AC=22;AF=0.393;AN=56;BaseQRankSum=-0.572;DP=401;FS=3.712;HRun=13;HaplotypeScore=47.8419;InbreedingCoeff=0.7746;MQ=69.69;MQ0=7;MQRankSum=1.793;QD=10.23;ReadPosRankSum=1.909;VQSLOD=2.8331;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,14:17:37.82:269,38,0	0/0:8,0:6:12.01:0,12,112	0/0:29,0:15:7.82:0,8,117	0/0:30,0:18:12.46:0,12,91	0/0:26,0:25:51.07:0,51,491	0/0:4,0:19:22.97:0,23,125	0/0:2,0:10:17.20:0,17,98	1/1:11,19:31:42.17:357,42,0	0/0:6,0:5:5.21:0,5,22	0/0:16,0:16:13.06:0,13,242	0/0:13,0:13:23.91:0,24,219	0/0:1,0:5:11.36:0,11,56	1/1:2,7:9:11.89:83,12,0	1/1:5,7:12:14.89:109,15,0	0/0:12,0:11:27.04:0,27,263	0/0:6,0:6:12.02:0,12,117	0/0:23,2:26:4.65:0,5,470	0/1:10,1:11:6.43:6,0,96	0/1:5,8:13:2.02:147,0,2	1/1:4,8:12:19.88:137,20,0	1/1:2,3:4:8.94:66,9,0	0/0:2,0:2:6:0,6,53	0/0:3,0:6:8.52:0,9,43	0/0:4,0:5:8.67:0,9,51	1/1:4,7:11:14.90:109,15,0	1/1:10,19:28:33.84:374,34,0	1/1:3,11:14:31.86:225,32,0	1/1:3,11:14:23.86:175,24,0
chr10	40108619	.	GC	G	5870.42	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=12.555;DP=747;FS=1.853;HRun=3;HaplotypeScore=73.7834;InbreedingCoeff=0.9999;MQ=77.19;MQ0=0;MQRankSum=-6.192;QD=34.13;ReadPosRankSum=2.650;VQSLOD=5.5422;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,144,2037	0/0:11,0:11:30.07:0,30,411	0/0:22,0:21:62.92:0,63,784	0/0:28,0:28:60.67:0,61,910	0/0:18,0:18:51.17:0,51,719	1/1:0,24:24:72.23:893,72,0	1/1:0,25:25:69.22:855,69,0	0/0:37,0:37:99:0,108,1522	1/1:1,22:23:60.19:744,60,0	0/0:25,0:25:75.25:0,75,1067	0/0:15,0:15:45.15:0,45,646	1/1:1,36:37:96.30:1190,96,0	0/0:29,0:29:81.26:0,81,1141	0/0:27,0:27:80.99:0,81,1115	0/0:29,0:29:87.29:0,87,1252	0/0:32,0:32:96.32:0,96,1382	0/0:28,0:28:84.28:0,84,1207	0/0:16,0:16:45.13:0,45,627	0/0:25,0:25:75.24:0,75,1063	0/0:20,0:20:60.20:0,60,863	0/0:63,0:63:99:0,184,2632	0/0:22,0:22:63.21:0,63,907	1/1:0,23:23:69.22:855,69,0	1/1:0,40:40:99:1333,108,0	0/0:18,0:18:51.17:0,51,734	0/0:27,0:27:81.27:0,81,1166	0/0:18,0:18:54.17:0,54,758	0/0:15,0:15:45.15:0,45,642
chr10	40109937	.	TA	T	7615.68	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=13.353;DP=644;FS=0.311;HRun=2;HaplotypeScore=64.3738;InbreedingCoeff=0.9884;MQ=70.90;MQ0=0;MQRankSum=0.390;QD=34.93;ReadPosRankSum=3.045;VQSLOD=5.2814;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:96.30:0,96,1397	1/1:0,12:12:33.11:427,33,0	0/0:14,0:14:33.09:0,33,463	0/0:22,0:22:57.06:0,57,774	1/1:1,37:38:99:1395,108,0	0/0:20,0:20:60.19:0,60,879	0/0:18,0:18:54.17:0,54,773	0/0:34,0:34:99:0,99,1440	0/0:20,0:20:60.20:0,60,897	1/1:1,19:20:57.18:732,57,0	1/1:1,26:27:72.15:902,72,0	0/0:25,0:25:75.25:0,75,1121	0/0:24,0:24:66.18:0,66,947	0/0:22,0:22:66.22:0,66,984	1/1:0,31:31:87.28:1129,87,0	1/1:2,19:21:15.24:695,15,0	1/1:1,19:20:54.18:701,54,0	1/1:0,15:15:42.14:543,42,0	0/0:21,0:21:60.19:0,60,880	0/0:22,0:22:66.22:0,66,970	0/0:28,0:28:81.27:0,81,1211	1/1:0,34:34:84.27:1091,84,0	0/0:23,0:23:69.22:0,69,1015	0/0:23,0:23:69.23:0,69,1034	0/0:25,0:25:75.25:0,75,1123	0/0:22,1:23:30.26:0,30,915	0/0:27,0:27:78.25:0,78,1143	0/0:3,0:3:9.03:0,9,135
chr10	40110445	.	A	AGTGTGT	23837.08	PASS	AB=1.000;AC=53;AF=0.946;AN=56;BaseQRankSum=-2.949;DP=784;FS=19.276;HRun=0;HaplotypeScore=206.9365;InbreedingCoeff=0.5446;MQ=60.66;MQ0=4;MQRankSum=-4.579;QD=31.36;ReadPosRankSum=1.140;VQSLOD=2.9334;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,11:27:42.13:1218,42,0	1/1:7,4:12:18.06:473,18,0	0/0:24,0:17:27.02:0,27,404	0/1:37,0:30:15.62:16,0,377	1/1:10,1:22:29.38:442,29,0	1/1:9,11:23:35.31:1067,35,0	1/1:20,14:38:50.47:1561,50,0	1/1:30,0:37:39.09:772,39,0	1/1:10,14:28:36.12:988,36,0	1/1:14,11:31:60.16:1281,60,0	1/1:14,11:26:21.07:627,21,0	1/1:10,1:41:84.29:2242,84,0	1/1:10,14:27:48.15:1328,48,0	1/1:10,19:32:69.23:2036,69,0	1/1:6,0:36:73.86:965,74,0	1/1:3,0:33:7.32:812,7,0	1/1:10,0:30:49.76:693,50,0	1/1:13,4:18:21.03:457,21,0	1/1:19,0:20:15.04:301,15,0	1/1:19,1:25:15.05:386,15,0	1/1:15,0:28:8.63:232,9,0	1/1:6,0:21:24.92:344,25,0	1/1:11,0:20:24.08:629,24,0	1/1:18,1:27:9.02:256,9,0	1/1:14,0:32:48.16:1258,48,0	1/1:26,0:39:69.23:1660,69,0	1/1:25,0:41:61.09:1526,61,0	1/1:3,0:8:12.04:270,12,0
chr10	40110773	.	A	ACATTCCAAGGT	17027.18	PASS	AB=0.955;AC=13;AF=0.232;AN=56;BaseQRankSum=-3.201;DP=761;FS=10.589;HRun=0;HaplotypeScore=232.3276;InbreedingCoeff=0.8970;MQ=80.75;MQ0=0;MQRankSum=-15.859;QD=74.03;ReadPosRankSum=-5.319;VQSLOD=2.5815;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:28,16:46:63.22:3119,63,0	0/0:8,0:8:21.07:0,21,686	0/0:20,0:20:21.07:0,21,512	0/0:25,0:25:39.06:0,39,1034	0/0:14,0:14:36.12:0,36,1129	1/1:10,11:23:42.14:2145,42,0	1/1:18,9:28:42.14:1929,42,0	0/0:34,0:34:54.06:0,54,1480	1/1:24,12:37:63.04:3164,63,0	0/0:31,0:31:54.15:0,54,1546	0/0:21,0:21:42.14:0,42,1211	0/0:45,0:45:99:0,102,3179	1/1:28,12:41:69.24:3321,69,0	1/1:21,13:34:63.09:3229,63,0	0/0:24,0:24:51.18:0,51,1618	0/1:20,1:21:99:121,0,1196	0/0:31,0:31:63.20:0,63,1985	0/0:27,0:27:54.19:0,54,1715	0/0:21,0:21:33.11:0,33,995	0/0:19,0:19:30.10:0,30,981	0/0:67,0:67:99:0,157,4836	0/0:18,0:18:39.12:0,39,1175	0/0:13,0:13:24.08:0,24,730	0/0:28,0:28:66.23:0,66,2103	0/0:21,0:21:51.17:0,51,1523	0/0:32,0:32:69.15:0,69,2038	0/0:24,0:24:45.15:0,45,1450	0/0:8,0:8:21.07:0,21,652
chr10	40111263	.	GAC	G	473.95	PASS	AB=0.968;AC=9;AF=0.161;AN=56;BaseQRankSum=6.164;DP=440;FS=48.180;HRun=0;HaplotypeScore=90.1797;InbreedingCoeff=0.0428;MQ=65.12;MQ0=3;MQRankSum=-1.186;QD=3.41;ReadPosRankSum=4.167;VQSLOD=-0.3487;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:38.88:0,39,466	0/0:6,0:6:15:0,15,210	0/0:16,0:14:6.49:0,6,214	0/0:10,0:8:18.17:0,18,132	0/0:24,0:25:59.57:0,60,468	0/0:16,0:16:23.98:0,24,315	0/0:16,0:16:23.96:0,24,291	0/1:18,1:19:36.59:37,0,109	0/0:9,0:9:23.96:0,24,299	0/0:20,0:20:42.06:0,42,548	0/0:12,0:12:33.50:0,33,464	0/0:8,0:8:11.99:0,12,151	0/0:10,0:10:23.99:0,24,312	0/0:8,0:8:11.91:0,12,136	0/0:17,0:18:19.82:0,20,275	0/0:16,0:16:28.56:0,29,307	0/0:27,0:26:9.82:0,10,340	0/0:29,0:29:55.04:0,55,857	0/1:18,0:18:27.41:27,0,112	0/1:18,1:18:34.41:103,0,34	1/1:13,1:14:8.82:68,9,0	0/0:5,0:6:14.67:0,15,100	0/0:10,0:10:23.84:0,24,258	0/0:15,0:15:9.74:0,10,362	0/1:18,1:19:40.32:66,0,40	0/1:24,2:25:19.62:181,0,20	0/1:18,0:18:54.60:105,0,55	0/1:6,0:6:9.71:29,0,10
chr10	40111274	.	CCA	C	404.34	PASS	AB=0.977;AC=10;AF=0.179;AN=56;BaseQRankSum=3.762;DP=507;FS=0.913;HRun=0;HaplotypeScore=107.7674;InbreedingCoeff=0.2449;MQ=64.84;MQ0=5;MQRankSum=-0.488;QD=2.77;ReadPosRankSum=6.172;VQSLOD=1.5536;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:48.73:0,49,486	0/0:9,0:9:17.85:0,18,167	0/0:26,0:15:10.15:0,10,286	0/0:15,0:8:10.96:0,11,76	0/0:21,0:21:36.72:0,37,233	0/0:18,0:18:26.73:0,27,293	0/0:17,0:17:29.16:0,29,255	0/1:26,0:26:38.12:38,0,199	0/0:9,0:9:20.93:0,21,250	0/0:19,0:19:52.22:0,52,585	0/0:11,0:11:24.39:0,24,349	0/0:12,0:12:17.94:0,18,202	0/0:12,0:12:27.02:0,27,279	0/0:12,0:12:20.87:0,21,194	0/0:24,0:24:39.60:0,40,364	0/0:19,0:19:32.93:0,33,260	0/0:33,0:32:29.66:0,30,360	0/0:34,1:35:36.90:0,37,815	0/1:16,1:17:59.34:59,0,85	0/1:18,1:18:23.68:108,0,24	1/1:12,0:12:16.09:58,16,0	0/0:7,0:7:17.59:0,18,116	0/0:12,0:12:26.91:0,27,247	0/0:19,0:19:33.64:0,34,407	0/1:20,0:20:61.96:62,0,75	0/1:30,1:30:72.73:117,0,73	0/1:16,0:16:15.75:62,0,16	1/1:5,0:5:12.03:53,12,0
chr10	40117487	.	A	AAAACAGACAGG	32824.72	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-8.111;DP=593;FS=12.562;HRun=0;HaplotypeScore=88.5199;InbreedingCoeff=0.7977;MQ=53.95;MQ0=50;MQRankSum=-10.540;QD=61.35;ReadPosRankSum=6.513;VQSLOD=2.8981;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,11:10:15.05:860,15,0	1/1:3,12:16:39.13:2188,39,0	0/0:33,0:29:57.94:0,58,1921	0/0:24,0:24:63.21:0,63,1886	1/1:4,14:15:36.12:2006,36,0	1/1:3,11:11:24.08:1318,24,0	1/1:6,8:7:9.03:517,9,0	1/1:10,2:12:11.97:299,12,0	1/1:3,18:12:24.08:1379,24,0	1/1:5,24:15:36.11:1816,36,0	1/1:5,12:14:36.12:2065,36,0	1/1:12,14:16:30.10:1723,30,0	1/1:9,10:12:18.06:1027,18,0	1/1:8,15:21:32.23:1893,32,0	1/1:5,10:10:21.07:1207,21,0	1/1:7,11:18:30.10:1722,30,0	1/1:6,11:13:18.06:1033,18,0	1/1:5,5:4:3.01:173,3,0	1/1:2,0:5:12.04:300,12,0	1/1:12,14:23:51.17:2725,51,0	1/1:10,9:12:12.04:690,12,0	1/1:4,10:8:18.06:1027,18,0	1/1:2,7:9:18.06:965,18,0	1/1:7,5:11:12.04:547,12,0	1/1:3,12:13:27.09:1532,27,0	1/1:6,13:11:30.03:1289,30,0	1/1:5,17:18:36.12:2059,36,0	1/1:3,2:6:9.03:465,9,0
chr10	40118298	.	A	ATT	5462.08	PASS	AB=0.579;AC=27;AF=0.482;AN=56;BaseQRankSum=-6.822;DP=479;FS=8.592;HRun=10;HaplotypeScore=71.5155;InbreedingCoeff=0.8817;MQ=74.34;MQ0=3;MQRankSum=-2.414;QD=23.75;ReadPosRankSum=-1.174;VQSLOD=3.6954;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:3,0:30:68.61:0,69,297	0/0:3,0:3:9.02:0,9,92	0/0:27,0:18:6.42:0,6,162	0/0:25,0:19:25.39:0,25,238	0/0:30,0:30:72.04:0,72,714	1/1:1,0:21:12.43:110,12,0	1/1:1,0:11:17.47:61,17,0	1/1:5,18:24:57.15:789,57,0	1/1:1,0:10:19.96:70,20,0	0/0:19,0:20:44.53:0,45,416	0/0:19,0:21:41.80:0,42,479	0/1:3,0:11:10.17:40,0,10	0/0:1,0:11:27.44:0,27,119	0/0:1,0:12:30.18:0,30,131	0/0:13,0:14:26.75:0,27,249	0/0:13,0:14:29.77:0,30,286	0/0:13,0:13:32.64:0,33,315	0/0:22,0:22:50.47:0,50,497	1/1:3,16:20:57.14:803,57,0	1/1:1,14:16:41.58:550,42,0	1/1:1,9:12:32.08:420,32,0	0/0:7,0:7:21.05:0,21,213	1/1:3,1:7:10.50:71,10,0	1/1:2,0:12:24.95:88,25,0	1/1:7,14:24:33.49:567,33,0	1/1:9,8:18:4.57:374,5,0	1/1:3,12:15:33.11:475,33,0	1/1:2,23:25:72.23:1044,72,0
chr10	40119194	.	GT	G	13436.85	PASS	AB=0.977;AC=53;AF=0.946;AN=56;BaseQRankSum=-7.631;DP=754;FS=4.435;HRun=10;HaplotypeScore=94.1666;InbreedingCoeff=0.6670;MQ=77.81;MQ0=3;MQRankSum=-4.889;QD=18.58;ReadPosRankSum=7.438;VQSLOD=4.6771;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,30:30:83.92:721,84,0	1/1:2,11:13:23.98:207,24,0	0/1:41,0:28:12.56:13,0,356	0/0:31,0:26:31.42:0,31,356	1/1:3,24:28:56.16:586,56,0	1/1:3,19:22:53.96:469,54,0	1/1:2,11:13:32.98:287,33,0	1/1:9,17:26:20.61:388,21,0	1/1:4,18:22:50.99:443,51,0	1/1:9,25:34:74.97:651,75,0	1/1:5,12:17:29.97:260,30,0	1/1:4,31:35:77.98:677,78,0	1/1:6,25:31:68.97:599,69,0	1/1:4,36:40:95.97:833,96,0	1/1:7,35:42:59.75:679,60,0	1/1:2,32:34:80.98:703,81,0	1/1:3,29:32:71.98:625,72,0	1/1:4,29:33:74.98:651,75,0	1/1:2,16:18:47.96:410,48,0	1/1:2,24:27:71.01:604,71,0	1/1:3,21:24:50.98:443,51,0	1/1:3,18:21:44.99:391,45,0	1/1:7,17:24:53.94:462,54,0	1/1:4,26:30:55.18:597,55,0	1/1:3,20:23:53.99:469,54,0	1/1:5,24:29:68.89:593,69,0	1/1:3,19:22:53.98:469,54,0	1/1:3,8:11:23.99:208,24,0
chr10	40120523	.	C	CA	1721.43	PASS	AB=0.855;AC=19;AF=0.339;AN=56;BaseQRankSum=0.733;DP=685;FS=2.949;HRun=14;HaplotypeScore=99.3791;InbreedingCoeff=0.4139;MQ=70.90;MQ0=1;MQRankSum=-2.869;QD=5.90;ReadPosRankSum=-5.140;VQSLOD=1.5659;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:9,0:26:22.91:121,23,0	1/1:3,9:13:3.89:186,4,0	0/0:27,0:18:8.26:0,8,70	0/1:18,0:18:0.40:0,0,31	0/0:30,0:30:49.90:0,50,326	0/0:27,3:30:41.58:0,42,396	0/1:15,1:16:0.52:1,0,127	0/0:21,1:25:14.97:0,15,202	0/0:31,0:32:10.52:0,11,267	1/1:19,10:33:20.61:365,21,0	0/1:11,15:28:19.37:270,0,19	0/0:27,0:28:34.20:0,34,216	1/1:24,0:27:33.07:175,33,0	1/1:10,2:22:18.88:98,19,0	0/0:19,4:24:2.43:0,2,145	0/1:7,14:21:18.81:225,0,19	0/1:21,2:23:54.11:54,0,167	1/1:3,17:23:31.41:378,31,0	0/0:17,1:19:11.04:0,11,191	0/0:27,5:32:6.14:0,6,293	0/1:17,1:19:21.02:21,0,128	0/0:27,0:27:31.27:0,31,209	0/1:17,1:19:9.16:9,0,193	0/0:26,0:27:61.01:0,61,388	0/0:21,0:21:32.31:0,32,211	0/0:20,0:20:14.27:0,14,206	0/0:27,7:35:23.70:0,24,281	0/0:12,1:15:7.27:0,7,158
chr10	40121501	.	G	GTTTC	9368.83	PASS	AB=0.963;AC=19;AF=0.339;AN=56;BaseQRankSum=-6.739;DP=717;FS=0.737;HRun=0;HaplotypeScore=138.7958;InbreedingCoeff=0.9275;MQ=73.43;MQ0=1;MQRankSum=-7.210;QD=37.93;ReadPosRankSum=3.968;VQSLOD=5.0032;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,3:29:46.03:845,46,0	0/0:4,0:18:48.49:0,48,369	0/0:27,0:18:27.15:0,27,411	0/1:25,0:23:9.60:10,0,333	0/0:12,0:41:84.33:0,84,577	1/1:2,34:37:72.25:1741,72,0	1/1:6,18:24:51.16:1171,51,0	0/0:21,0:29:84:0,84,1107	1/1:1,13:14:24.08:580,24,0	0/0:9,0:25:64.80:0,65,485	0/0:12,0:21:39.16:0,39,347	1/1:4,22:28:66.22:1586,66,0	1/1:1,0:22:33.11:599,33,0	1/1:4,2:22:44.25:861,44,0	0/0:6,0:28:65.53:0,66,474	0/0:6,0:34:83.14:0,83,630	0/0:6,0:22:37:0,37,292	0/0:5,0:21:53.58:0,54,410	0/0:18,0:22:48.03:0,48,653	0/0:25,0:26:72.17:0,72,1094	0/0:18,0:18:54.09:0,54,857	0/0:3,0:25:48.42:0,48,335	1/1:4,19:25:50.88:1100,51,0	1/1:5,15:20:39.13:876,39,0	0/0:16,0:17:45.11:0,45,751	0/0:30,0:31:83.67:0,84,1286	0/0:39,0:39:99:0,111,1831	0/0:25,0:25:60.20:0,60,1105
chr10	40121502	.	T	TTTC	5900.54	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=7.482;DP=718;FS=0.724;HRun=0;HaplotypeScore=141.3373;InbreedingCoeff=0.9903;MQ=73.35;MQ0=1;MQRankSum=-4.234;QD=27.19;ReadPosRankSum=4.389;VQSLOD=4.8771;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:27,1:28:44.69:617,45,0	0/0:18,0:18:45.34:0,45,291	0/0:28,0:18:35.54:0,36,408	0/0:26,0:23:9:0,9,334	0/0:42,0:42:66.20:0,66,438	1/1:36,1:37:72.23:1062,72,0	1/1:23,0:23:50.50:678,51,0	0/0:29,0:29:84.56:0,85,1004	1/1:16,0:16:24.06:324,24,0	0/0:25,0:25:63.60:0,64,422	0/0:20,0:21:37.14:0,37,289	1/1:28,0:28:66.16:921,66,0	1/1:22,0:22:33.09:438,33,0	1/1:21,0:21:26.34:590,26,0	0/0:28,0:28:63.83:0,64,385	0/0:34,0:34:71.69:0,72,497	0/0:22,0:22:36.01:0,36,234	0/0:21,0:21:52.20:0,52,331	0/0:21,0:21:50.81:0,51,616	0/0:26,0:26:75.16:0,75,1030	0/0:19,0:19:54.09:0,54,783	0/0:26,0:26:48.31:0,48,288	1/1:24,0:24:50.06:694,50,0	1/1:16,2:18:39.11:576,39,0	0/0:18,0:18:48:0,48,706	0/0:31,0:31:81.54:0,82,1196	0/0:41,0:41:99:0,111,1677	0/0:25,0:25:63.19:0,63,1020
chr10	40121874	.	G	GTACT	6328.28	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.948;DP=787;FS=1.959;HRun=0;HaplotypeScore=132.8813;InbreedingCoeff=0.9996;MQ=78.62;MQ0=1;MQRankSum=-4.732;QD=64.57;ReadPosRankSum=0.184;VQSLOD=6.8078;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,34:36:93.23:2359,93,0	0/0:14,0:14:42.14:0,42,784	0/0:19,0:19:54.14:0,54,906	0/0:19,0:19:35.76:0,36,633	0/0:36,0:36:96.32:0,96,1761	0/0:20,0:20:60.21:0,60,1120	0/0:23,0:23:66.23:0,66,1230	0/0:24,0:24:69.24:0,69,1284	0/0:27,0:27:72.23:0,72,1313	0/0:30,0:30:87.30:0,87,1621	0/0:17,0:17:45.15:0,45,838	0/0:42,0:42:99:0,111,2062	1/1:4,24:30:75.26:1972,75,0	1/1:4,26:31:75.26:1997,75,0	0/0:37,0:37:99:0,108,2011	0/0:37,0:37:99:0,111,2064	0/0:43,0:43:99:0,120,2214	0/0:18,0:18:51.17:0,51,952	0/0:24,0:24:72.23:0,72,1270	0/0:23,0:23:60.16:0,60,1054	0/0:32,0:32:93.32:0,93,1736	0/0:31,0:31:84.29:0,84,1568	0/0:35,0:35:96.33:0,96,1789	0/0:30,0:30:87.30:0,87,1624	0/0:26,0:26:75.26:0,75,1400	0/0:36,0:36:99:0,105,1924	0/0:37,0:35:93.32:0,93,1712	0/0:9,0:9:27.09:0,27,504
chr10	40122650	.	AT	A	692.07	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=5.316;DP=542;FS=6.026;HRun=11;HaplotypeScore=117.9321;InbreedingCoeff=0.8252;MQ=70.18;MQ0=0;MQRankSum=-7.918;QD=10.81;ReadPosRankSum=-1.023;VQSLOD=2.5300;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,19:23:47.87:388,48,0	0/0:13,0:13:36.07:0,36,370	0/1:13,0:12:5.66:6,0,86	0/0:14,0:11:9.84:0,10,87	0/0:25,0:25:72.16:0,72,753	0/0:23,0:23:54.11:0,54,555	0/0:21,0:21:60.13:0,60,630	0/0:29,0:29:51.05:0,51,518	0/0:17,0:17:45.08:0,45,464	0/0:16,1:17:11.43:0,11,315	0/0:15,0:16:35.95:0,36,366	0/0:17,0:17:42.09:0,42,440	1/1:3,9:12:26.95:222,27,0	1/1:5,8:13:26.94:222,27,0	0/0:23,0:23:63.14:0,63,659	0/0:18,0:18:50.95:0,51,518	0/0:24,0:24:47.02:0,47,580	0/0:16,0:16:36.06:0,36,373	0/0:18,0:19:50.94:0,51,506	0/0:27,0:27:74.74:0,75,756	0/0:9,0:9:27.06:0,27,281	0/0:11,1:12:8.45:0,8,288	0/0:16,0:17:32.92:0,33,333	0/0:21,0:21:60.15:0,60,640	0/0:36,1:37:68.59:0,69,919	0/0:16,0:16:39.10:0,39,414	0/0:32,0:31:78.11:0,78,795	0/0:15,0:15:42.08:0,42,432
chr10	40122681	.	G	GC	14973.61	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-0.254;DP=618;FS=8.100;HRun=2;HaplotypeScore=109.0864;InbreedingCoeff=0.9997;MQ=70.11;MQ0=0;MQRankSum=-2.835;QD=39.40;ReadPosRankSum=0.568;VQSLOD=4.0421;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,31:30:84.20:1161,84,0	0/0:10,0:10:27.08:0,27,335	0/0:21,0:21:34.02:0,34,556	0/0:22,0:20:48.15:0,48,594	0/0:30,0:30:81.23:0,81,990	1/1:0,25:25:66.22:950,66,0	1/1:3,20:23:57.19:821,57,0	1/1:5,26:31:90.26:1262,90,0	1/1:1,19:20:57.19:821,57,0	0/0:23,0:23:69.21:0,69,846	0/0:20,0:20:57.18:0,57,706	1/1:0,21:21:57.19:819,57,0	1/1:4,12:16:33.11:475,33,0	1/1:0,19:19:57.19:820,57,0	0/0:29,0:29:87.27:0,87,1078	0/0:26,0:26:72.23:0,72,893	0/0:21,0:21:60.19:0,60,744	0/0:15,0:15:45.14:0,45,558	1/1:0,14:14:39.13:562,39,0	1/1:0,31:31:87.21:1205,87,0	1/1:1,10:11:30.10:432,30,0	0/0:21,0:21:63.20:0,63,781	1/1:0,18:18:48.16:690,48,0	1/1:0,20:20:60.20:864,60,0	1/1:1,29:30:87.29:1252,87,0	1/1:1,14:15:42.11:573,42,0	1/1:2,33:34:99:1419,99,0	1/1:1,19:20:60.19:849,60,0
chr10	40123615	.	TTGC	T	3177.38	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=10.205;DP=618;FS=24.672;HRun=0;HaplotypeScore=86.4823;InbreedingCoeff=0.9995;MQ=76.31;MQ0=0;MQRankSum=-0.330;QD=39.72;ReadPosRankSum=5.852;VQSLOD=1.9331;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,44:45:99:1892,111,0	0/0:12,0:12:36.12:0,36,762	0/0:20,0:20:56.75:0,57,1005	0/0:11,0:11:33.07:0,33,629	0/0:24,0:24:69.24:0,69,1588	0/0:14,0:14:39.13:0,39,876	0/0:22,0:22:66.21:0,66,1474	0/0:37,0:36:99:0,102,2138	0/0:22,0:22:60.19:0,60,1316	0/0:26,0:26:75.26:0,75,1717	0/0:19,0:19:57.20:0,57,1297	0/0:34,0:34:92.87:0,93,2043	1/1:0,19:19:51.17:868,51,0	1/1:1,15:16:33.11:560,33,0	0/0:27,0:27:78.20:0,78,1698	0/0:21,0:21:60.19:0,60,1266	0/0:27,0:27:81.28:0,81,1836	0/0:18,0:18:54.17:0,54,1189	0/0:26,0:26:75.23:0,75,1550	0/0:24,0:24:72.25:0,72,1616	0/0:18,0:18:48.15:0,48,1023	0/0:17,0:17:51.17:0,51,1087	0/0:15,0:15:45.14:0,45,991	0/0:26,0:26:69.13:0,69,1466	0/0:20,0:20:60.19:0,60,1284	0/0:20,0:20:57.19:0,57,1240	0/0:28,0:28:75.24:0,75,1621	0/0:10,0:10:30.01:0,30,549
chr10	40123825	.	TGAGAGAGA	T	548.08	PASS	AB=0.938;AC=20;AF=0.476;AN=42;BaseQRankSum=1.494;DP=532;FS=6.822;HRun=0;HaplotypeScore=120.6080;InbreedingCoeff=0.2940;MQ=31.86;MQ0=84;MQRankSum=-1.199;QD=1.94;ReadPosRankSum=0.138;VQSLOD=1.6457;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:26:0.34:0,0,1	./.	./.	./.	./.	1/1:14,5:14:3.01:71,3,0	0/0:24,4:16:0:0,0,0	1/1:17,0:17:7.76:39,8,0	1/1:11,12:20:3.01:70,3,0	1/1:18,0:14:15.05:281,15,0	./.	0/0:22,0:19:3.01:0,3,73	0/0:16,0:14:20.77:0,21,312	0/0:30,0:21:23.67:0,24,769	0/1:34,0:32:0.08:0,0,1	1/1:18,0:14:2.95:59,3,0	0/0:21,0:9:3.01:0,3,39	1/1:21,0:11:2.99:24,3,0	0/1:11,0:9:22.56:42,0,23	0/1:13,0:8:0:0,0,0	1/1:35,0:25:0.94:2,1,0	./.	./.	0/0:36,0:24:3:0,3,57	0/0:21,0:15:2.60:0,3,17	0/1:10,0:20:51.06:77,0,51	0/1:15,0:11:1.64:2,0,2	0/0:15,0:10:2.56:0,3,58
chr10	40123846	.	GAGAGAGAGAGAGAGAC	G	1544.67	PASS	AB=1.000;AC=15;AF=0.278;AN=54;BaseQRankSum=-4.554;DP=562;FS=10.441;HRun=0;HaplotypeScore=179.1755;InbreedingCoeff=0.4773;MQ=36.81;MQ0=79;MQRankSum=0.961;QD=8.68;ReadPosRankSum=-0.405;VQSLOD=2.0721;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:30:15.53:0,16,357	0/1:6,0:5:8.57:134,0,9	1/1:11,0:2:3.85:11,4,0	0/0:19,0:4:5.08:0,5,58	1/1:18,1:14:6.46:51,6,0	0/0:11,0:7:2.99:0,3,24	0/0:28,0:17:20.82:0,21,393	0/1:24,0:23:73.95:74,0,454	0/0:22,0:20:8.96:0,9,70	1/1:6,16:18:44.91:991,45,0	0/0:12,0:9:2.93:0,3,25	0/0:19,0:16:11.84:0,12,225	0/0:21,0:19:44.05:0,44,1071	0/0:31,0:25:43.22:0,43,2501	1/1:29,3:30:7.86:62,8,0	1/1:20,0:16:5.60:125,6,0	0/0:18,0:9:4.37:0,4,62	1/1:18,0:9:11.95:222,12,0	0/0:12,0:9:21:0,21,485	0/0:12,0:7:2.92:0,3,17	0/0:26,0:21:15.05:0,15,525	./.	0/0:8,0:6:2.60:0,3,10	0/0:33,0:22:8.31:0,8,179	0/0:22,0:17:21:0,21,585	0/1:26,0:22:40.51:41,0,987	0/0:19,0:15:30.08:0,30,736	0/0:16,0:12:16.73:0,17,350
chr10	40123848	.	GAGAGAGAGAGAGAC	G	1405.81	PASS	AB=1.000;AC=16;AF=0.296;AN=54;BaseQRankSum=-4.438;DP=560;FS=15.830;HRun=0;HaplotypeScore=173.7125;InbreedingCoeff=0.4731;MQ=38.60;MQ0=78;MQRankSum=0.178;QD=7.28;ReadPosRankSum=-1.863;VQSLOD=1.7199;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:30:12.12:0,12,259	1/1:7,0:6:8.95:143,9,0	0/1:12,0:3:4.40:4,0,18	0/1:23,0:6:18.83:19,0,50	1/1:19,1:15:12:125,12,0	0/0:11,0:7:1.82:0,2,5	0/0:27,0:18:21.29:0,21,318	0/1:24,0:23:18.39:18,0,380	0/0:21,0:19:6.76:0,7,52	1/1:21,0:17:44.85:829,45,0	0/0:12,0:9:2.93:0,3,25	0/0:19,0:16:11.84:0,12,207	0/0:21,0:19:38.05:0,38,853	0/0:31,0:25:43.20:0,43,2186	1/1:24,7:29:10.90:87,11,0	1/1:8,12:16:5.28:141,5,0	0/1:19,0:10:34.02:34,0,51	1/1:16,0:8:11.98:177,12,0	0/0:11,0:9:20.99:0,21,394	0/0:12,0:7:2.92:0,3,17	0/0:24,0:19:15.05:0,15,440	./.	0/0:8,0:6:2.60:0,3,10	0/0:33,0:22:8.45:0,8,163	0/0:20,0:15:21:0,21,491	0/0:26,0:22:5.74:0,6,757	0/0:19,0:15:30.08:0,30,594	0/0:17,0:13:19.72:0,20,323
chr10	40125421	.	CGTATGTATGTAT	C	2394.82	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=4.176;DP=830;FS=1.526;HRun=0;HaplotypeScore=278.6696;InbreedingCoeff=0.9552;MQ=61.52;MQ0=0;MQRankSum=-6.908;QD=23.03;ReadPosRankSum=-1.543;VQSLOD=2.0778;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:15,16:31:12.51:284,13,0	0/0:13,0:13:30.08:0,30,957	0/0:22,0:20:11.98:0,12,204	0/0:27,0:21:15.67:0,16,286	0/0:22,0:22:46.66:0,47,1327	0/0:28,0:28:54.15:0,54,2041	0/0:28,0:28:33.09:0,33,865	0/0:49,0:49:78.23:0,78,1672	0/0:34,0:34:33.11:0,33,971	0/0:37,0:37:93.30:0,93,3072	0/0:14,0:14:28.32:0,28,560	0/0:16,0:58:21.06:0,21,751	1/1:6,29:35:39.13:1227,39,0	1/1:8,30:38:33.11:1024,33,0	0/0:49,0:49:84.25:0,84,2893	0/0:36,0:36:60.21:0,60,2544	0/0:17,0:17:21.05:0,21,617	0/0:25,0:25:36.02:0,36,1078	0/0:23,0:23:30.01:0,30,1130	0/0:27,0:27:51.15:0,51,1995	0/0:44,0:44:90.27:0,90,4238	0/0:26,0:26:35.06:0,35,1434	0/0:17,0:17:16.18:0,16,657	0/0:25,0:25:26.41:0,26,559	0/0:31,0:30:66.20:0,66,2702	0/0:31,0:31:60.19:0,60,2468	0/0:34,0:34:90.76:0,91,4138	0/0:9,0:9:12.04:0,12,497
chr10	40125455	.	T	TATGA	4110.47	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=0.917;DP=824;FS=5.125;HRun=0;HaplotypeScore=162.1957;InbreedingCoeff=0.7413;MQ=55.60;MQ0=9;MQRankSum=-1.957;QD=11.61;ReadPosRankSum=1.167;VQSLOD=3.1518;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:13.23:0,13,116	1/1:18,0:18:40.57:413,41,0	0/0:24,0:14:25.35:0,25,221	0/0:27,0:18:39.86:0,40,377	1/1:4,19:25:20.93:354,21,0	0/0:27,0:27:40.80:0,41,361	0/0:26,0:26:45.11:0,45,367	0/0:47,0:44:77.24:0,77,722	0/1:34,0:34:20.90:21,0,292	1/1:39,0:39:80.71:732,81,0	1/1:15,0:15:21.44:198,21,0	0/1:52,0:52:87.76:88,0,250	0/0:39,0:39:62.77:0,63,603	0/0:39,0:39:59.31:0,59,550	1/1:14,31:47:27.09:666,27,0	1/1:9,30:40:33.03:757,33,0	1/1:2,19:21:6.02:148,6,0	1/1:16,0:16:17.97:234,18,0	0/0:22,0:15:33.02:0,33,424	0/0:19,0:19:39.07:0,39,504	0/0:43,0:43:74.11:0,74,1211	1/1:3,20:25:28.37:483,28,0	0/0:15,0:15:8.43:0,8,116	0/1:22,0:22:18.54:19,0,99	0/0:38,0:38:86.81:0,87,980	0/0:27,0:27:57.13:0,57,782	0/0:46,0:46:83.36:0,83,1336	0/0:11,0:10:26.99:0,27,273
chr10	40127495	.	ATCTTACCGCCACTG	A	8174.26	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=12.577;DP=464;FS=0.000;HRun=0;HaplotypeScore=182.8823;InbreedingCoeff=0.9683;MQ=98.02;MQ0=0;MQRankSum=-11.511;QD=77.12;ReadPosRankSum=0.173;VQSLOD=4.3215;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:48.14:0,48,2638	0/0:7,0:7:21.07:0,21,1395	0/0:23,0:23:66.23:0,66,3465	0/0:27,0:27:66.04:0,66,3511	0/0:13,0:13:39.13:0,39,2416	0/0:14,0:14:42.14:0,42,2968	0/0:25,0:25:75.26:0,75,5059	1/1:3,12:15:36.11:1201,36,0	0/0:24,0:24:72.23:0,72,4655	0/0:14,0:14:39.13:0,39,2653	0/0:9,0:9:27.09:0,27,1835	0/0:20,0:20:51.18:0,51,3547	0/0:16,0:16:45.15:0,45,3107	0/0:20,0:20:57.20:0,57,3648	0/0:26,0:26:78.27:0,78,5232	0/0:15,0:15:45.15:0,45,3181	0/0:23,0:23:66.23:0,66,4410	0/0:19,0:19:54.19:0,54,3557	1/1:7,8:15:24.08:935,24,0	1/1:2,16:18:42.14:1590,42,0	1/1:3,6:9:9.03:384,9,0	0/0:15,0:15:45.15:0,45,3069	0/0:11,0:11:30.10:0,30,1801	0/0:20,0:20:57.20:0,57,3873	1/1:1,18:19:48.16:1903,48,0	1/1:5,5:10:15.05:640,15,0	1/1:3,14:17:33.11:1266,33,0	1/1:1,2:3:6.02:256,6,0
chr10	40128022	.	CTGTT	C	4203.87	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=16.559;DP=718;FS=1.693;HRun=0;HaplotypeScore=146.5725;InbreedingCoeff=0.9990;MQ=82.97;MQ0=0;MQRankSum=-15.165;QD=34.18;ReadPosRankSum=2.374;VQSLOD=3.9908;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:84.27:0,84,2370	0/0:14,0:14:42.14:0,42,1217	0/0:25,0:25:75.26:0,75,2028	0/0:24,0:24:69.14:0,69,1764	0/0:40,0:40:99:0,120,3457	1/1:2,28:30:82.82:1087,83,0	1/1:0,12:13:39.06:489,39,0	0/0:31,0:31:89.52:0,90,2484	1/1:1,14:15:45.15:611,45,0	0/0:44,0:44:99:0,132,3712	0/0:20,0:20:60.21:0,60,1710	1/1:3,29:32:86.27:1109,86,0	0/0:29,0:29:87.30:0,87,2477	0/0:26,0:26:78.27:0,78,2202	0/0:32,0:32:96.33:0,96,2709	0/0:24,0:24:72.25:0,72,2070	0/0:22,0:22:66.23:0,66,1816	0/0:24,0:24:72.25:0,72,2000	0/0:26,0:26:78.27:0,78,2207	0/0:35,0:35:99:0,105,2967	0/0:14,0:14:39.13:0,39,1077	0/0:20,0:20:60.19:0,60,1640	1/1:2,19:21:52.22:674,52,0	1/1:1,9:12:20.93:233,21,0	0/0:34,0:34:99:0,102,2906	0/0:34,0:34:99:0,102,2868	0/0:37,0:37:99:0,111,3098	0/0:11,0:11:30.10:0,30,811
chr10	40128027	.	ACT	A	2546.43	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=16.333;DP=702;FS=1.239;HRun=0;HaplotypeScore=121.1018;InbreedingCoeff=0.9965;MQ=82.04;MQ0=0;MQRankSum=-15.984;QD=21.04;ReadPosRankSum=2.697;VQSLOD=3.8496;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:81.26:0,81,1608	0/0:14,0:14:42.14:0,42,853	0/0:23,0:23:66.23:0,66,1330	0/0:24,0:24:65.86:0,66,1301	0/0:40,0:40:99:0,117,2377	1/1:0,28:28:80.99:705,81,0	1/1:1,12:13:35.92:303,36,0	0/0:31,0:31:89.85:0,90,1828	1/1:2,14:17:45.01:402,45,0	0/0:41,0:41:99:0,123,2456	0/0:20,0:20:60.19:0,60,1181	1/1:4,29:33:88.61:763,89,0	0/0:31,0:31:93.32:0,93,1865	0/0:28,0:28:84.29:0,84,1704	0/0:28,0:28:84.29:0,84,1707	0/0:25,0:25:75.26:0,75,1524	0/0:23,0:23:66.23:0,66,1339	0/0:23,0:23:69.24:0,69,1397	0/0:28,0:28:84.29:0,84,1698	0/0:34,0:34:99:0,99,2012	0/0:14,0:14:39.13:0,39,792	0/0:19,0:19:57.20:0,57,1158	1/1:0,21:21:50.95:434,51,0	1/1:0,9:9:14.96:126,15,0	0/0:33,0:33:99:0,99,2001	0/0:30,0:30:90.31:0,90,1806	0/0:35,0:35:99:0,105,2133	0/0:10,0:10:27.09:0,27,545
chr10	40129422	.	AT	A	7244.22	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=14.865;DP=703;FS=0.960;HRun=5;HaplotypeScore=69.1337;InbreedingCoeff=0.9997;MQ=87.17;MQ0=0;MQRankSum=-3.277;QD=29.81;ReadPosRankSum=3.969;VQSLOD=5.4186;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,31:33:81.23:919,81,0	0/0:11,0:11:27.09:0,27,368	0/0:29,0:29:38.63:0,39,832	0/0:21,0:21:51.11:0,51,620	0/0:32,0:32:96.29:0,96,1266	1/1:0,31:31:87.25:987,87,0	1/1:0,15:15:39.11:442,39,0	0/0:41,0:41:99:0,114,1474	1/1:0,22:22:60.17:678,60,0	0/0:35,0:35:99:0,99,1301	0/0:25,0:25:72.24:0,72,983	1/1:2,39:41:99:1225,108,0	1/1:0,31:31:81.23:919,81,0	1/1:1,25:26:66.19:748,66,0	0/0:32,0:32:96.31:0,96,1296	0/0:20,1:21:29.16:0,29,770	0/0:15,0:15:45.14:0,45,599	0/0:31,0:31:81.25:0,81,1087	0/0:26,0:26:66.69:0,67,895	0/0:23,0:23:69.22:0,69,929	0/0:15,0:15:39.10:0,39,500	0/0:23,0:23:69.23:0,69,942	1/1:0,22:22:60.17:680,60,0	1/1:1,21:22:57.16:646,57,0	0/0:21,0:21:60.20:0,60,820	0/0:23,0:23:66.21:0,66,889	0/0:24,0:24:69.22:0,69,925	0/0:12,0:12:36.09:0,36,460
chr10	40130534	.	CAAAT	C	2062.83	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.834;DP=624;FS=2.028;HRun=0;HaplotypeScore=98.0945;InbreedingCoeff=0.9954;MQ=74.52;MQ0=2;MQRankSum=-4.721;QD=30.79;ReadPosRankSum=4.095;VQSLOD=3.7279;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,33:37:84.20:1450,84,0	0/0:15,0:15:42.14:0,42,1012	0/0:28,0:28:72.06:0,72,1361	0/0:16,0:15:27.08:0,27,652	0/0:34,0:34:93.30:0,93,2223	0/0:29,0:29:84.27:0,84,2123	0/0:11,0:11:30.10:0,30,742	0/0:35,0:35:87.30:0,87,2123	0/0:21,0:21:57.20:0,57,1469	0/0:21,0:21:54.19:0,54,1338	0/0:22,0:22:57.20:0,57,1335	0/0:24,0:24:63.20:0,63,1512	1/1:4,12:15:18.06:323,18,0	1/1:0,14:13:24.08:431,24,0	0/0:33,0:33:93.31:0,93,2270	0/0:19,0:19:57.18:0,57,1323	0/0:16,0:16:42.14:0,42,1031	0/0:14,0:14:39.12:0,39,895	0/0:22,0:22:60.21:0,60,1530	0/0:23,0:23:63.20:0,63,1484	0/0:15,0:15:42.14:0,42,1062	0/0:20,0:20:54.18:0,54,1360	0/0:20,0:20:54.17:0,54,1298	0/0:10,0:10:27.09:0,27,667	0/0:31,0:31:81.26:0,81,1870	0/0:34,0:34:93.32:0,93,2335	0/0:25,0:25:72.23:0,72,1692	0/0:19,0:19:57.20:0,57,1386
chr10	40134271	.	G	GT	4314.98	PASS	AB=0.813;AC=22;AF=0.393;AN=56;BaseQRankSum=-10.204;DP=645;FS=3.727;HRun=11;HaplotypeScore=80.5674;InbreedingCoeff=0.7892;MQ=64.33;MQ0=7;MQRankSum=-1.972;QD=15.86;ReadPosRankSum=-2.910;VQSLOD=4.6624;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,34:41:45.55:647,46,0	0/0:2,0:6:6.10:0,6,18	0/0:25,0:19:26.13:0,26,179	0/1:20,0:11:14.46:14,0,60	0/0:5,0:26:36.64:0,37,106	0/0:17,0:17:41.82:0,42,325	0/0:27,0:27:71.70:0,72,557	1/1:7,25:30:74.98:711,75,0	0/0:25,0:25:53.77:0,54,416	0/0:7,0:24:18.08:0,18,94	0/0:5,0:21:26.46:0,26,76	0/0:24,1:25:26.19:0,26,387	1/1:3,12:15:30.06:304,30,0	1/1:4,16:21:17.63:308,18,0	0/0:3,0:19:28.95:0,29,104	0/0:6,0:26:38.68:0,39,112	0/0:9,0:38:40.90:0,41,158	0/0:3,0:21:22.40:0,22,65	0/1:8,12:19:4.39:323,0,4	1/1:3,16:19:41.59:390,42,0	1/1:4,11:15:23.55:243,24,0	0/0:5,0:15:22.90:0,23,80	0/0:16,0:17:34.90:0,35,261	0/0:30,1:32:26.87:0,27,460	1/1:5,18:22:36.07:364,36,0	1/1:13,11:23:2.22:337,2,0	1/1:5,16:22:35.91:349,36,0	1/1:2,17:19:0.53:324,1,0
chr10	40135312	.	G	GATGA	5859.19	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-11.564;DP=787;FS=4.785;HRun=0;HaplotypeScore=128.2191;InbreedingCoeff=0.9986;MQ=92.56;MQ0=0;MQRankSum=-0.300;QD=56.89;ReadPosRankSum=3.205;VQSLOD=6.3380;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,22:29:63.53:1621,64,0	0/0:16,0:16:45.11:0,45,804	0/0:34,0:35:77.81:0,78,1317	0/0:37,0:36:70.15:0,70,1378	0/0:25,0:25:75.26:0,75,1377	0/0:22,0:22:60.21:0,60,1120	0/0:27,0:27:78.27:0,78,1445	0/0:35,0:34:93.30:0,93,1629	0/0:31,0:31:87.30:0,87,1614	0/0:25,0:25:69.24:0,69,1259	0/0:14,0:14:36.12:0,36,663	0/0:35,0:35:93.32:0,93,1716	1/1:8,30:39:81.24:2078,81,0	1/1:3,31:35:81.28:2160,81,0	0/0:52,0:52:99:0,154,2816	0/0:33,0:33:96.33:0,96,1770	0/0:40,0:40:99:0,117,2086	0/0:16,0:16:42.14:0,42,773	0/0:13,0:13:23.23:0,23,385	0/0:9,0:9:27.09:0,27,485	0/0:63,0:63:99:0,178,3193	0/0:23,0:23:69.24:0,69,1287	0/0:13,0:13:36.12:0,36,650	0/0:37,0:37:99:0,108,1960	0/0:14,0:14:39.13:0,39,728	0/0:20,0:20:57.19:0,57,1043	0/0:34,0:34:96.28:0,96,1708	0/0:14,0:13:36.12:0,36,672
chr10	40137568	.	GT	G	1804.86	PASS	AB=0.857;AC=16;AF=0.286;AN=56;BaseQRankSum=-0.538;DP=577;FS=7.933;HRun=12;HaplotypeScore=153.8462;InbreedingCoeff=0.7701;MQ=64.82;MQ0=8;MQRankSum=-2.905;QD=9.30;ReadPosRankSum=1.266;VQSLOD=1.2506;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:14,15:29:58.95:414,59,0	0/0:15,0:13:32.88:0,33,309	0/0:44,0:23:2.29:0,2,126	0/1:37,0:18:2.33:18,0,2	0/1:15,9:25:2.22:214,0,2	0/0:23,0:22:38.50:0,38,373	0/0:13,0:13:32.65:0,33,275	0/0:29,0:28:45.55:0,46,198	0/0:15,0:15:26.48:0,26,235	0/0:29,1:31:8.20:0,8,266	0/0:22,0:19:33.06:0,33,269	0/0:18,0:21:28.58:0,29,144	1/1:5,9:14:32.28:232,32,0	1/1:8,8:17:34.82:250,35,0	1/1:4,9:13:3.24:196,3,0	1/1:6,3:10:5.47:121,5,0	1/1:12,12:23:43.36:310,43,0	0/0:16,1:16:26.96:0,27,208	0/0:22,0:22:50.96:0,51,233	0/0:20,0:18:36.67:0,37,150	0/0:5,0:5:10.71:0,11,45	1/1:10,11:22:18.24:236,18,0	0/0:8,0:9:21.18:0,21,101	0/0:5,0:9:9.09:0,9,36	0/0:28,0:25:51.07:0,51,219	0/0:28,0:29:62.09:0,62,281	0/0:20,0:19:40.40:0,40,175	0/0:2,0:2:5.58:0,6,27
chr10	40137570	.	T	TG	3902.41	PASS	AB=0.841;AC=17;AF=0.304;AN=56;BaseQRankSum=-8.139;DP=593;FS=7.713;HRun=0;HaplotypeScore=158.0290;InbreedingCoeff=0.5849;MQ=61.29;MQ0=10;MQRankSum=0.234;QD=16.68;ReadPosRankSum=4.270;VQSLOD=5.1850;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:77.70:0,78,613	0/0:15,0:13:36.09:0,36,461	0/1:46,0:21:9.21:9,0,281	0/0:38,0:15:0.68:0,1,86	0/0:26,0:24:57.47:0,57,421	0/0:23,0:22:62.81:0,63,666	0/0:14,0:13:35.84:0,36,432	1/1:6,25:29:70.46:821,70,0	0/0:15,0:15:35.28:0,35,427	0/0:30,0:30:63.17:0,63,620	0/0:25,0:22:47.49:0,47,522	0/0:20,0:20:11.45:0,11,177	0/0:15,0:15:41.66:0,42,328	0/0:18,0:18:47.19:0,47,361	0/0:14,0:13:32.01:0,32,230	0/0:12,0:11:26.99:0,27,159	0/0:23,0:21:53.75:0,54,389	0/0:17,0:15:24.20:0,24,344	0/1:5,18:22:8.45:589,0,8	1/1:4,17:19:35.18:497,35,0	1/1:2,5:6:11.93:159,12,0	0/0:23,0:23:62.67:0,63,500	0/1:11,0:10:9.12:9,0,22	0/1:10,0:9:13:13,0,18	1/1:10,21:26:15.93:557,16,0	1/1:12,17:28:43.36:746,43,0	1/1:10,12:21:5.57:470,6,0	0/1:1,1:2:1.27:34,0,1
chr10	40137577	.	TTTTG	T	1640.40	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=-0.525;DP=599;FS=8.399;HRun=0;HaplotypeScore=174.7874;InbreedingCoeff=0.2736;MQ=57.47;MQ0=15;MQRankSum=1.971;QD=7.32;ReadPosRankSum=1.437;VQSLOD=2.2689;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:23,6:29:44.61:698,45,0	0/0:15,0:13:10.35:0,10,380	0/0:52,0:21:25.03:0,25,230	0/1:40,0:15:7.30:7,0,13	0/1:28,0:24:99:152,0,146	0/0:22,0:21:38.98:0,39,549	0/0:18,0:16:16.11:0,16,334	0/0:26,0:24:39.11:0,39,709	0/0:16,0:16:20.97:0,21,379	0/0:25,0:25:1.80:0,2,472	0/0:23,0:20:38.24:0,38,412	0/0:17,0:17:17.16:0,17,295	1/1:16,2:18:36.91:299,37,0	1/1:15,2:17:28.11:261,28,0	0/1:17,0:16:80.65:81,0,86	0/1:14,0:13:11.22:11,0,154	0/1:23,0:21:35.85:162,0,36	0/1:18,0:16:8.51:9,0,188	0/0:24,0:22:56.18:0,56,832	0/0:21,0:19:49.28:0,49,650	0/0:10,0:7:20.08:0,20,261	0/1:20,0:20:99:127,0,157	0/0:11,0:10:26.41:0,26,217	0/0:9,0:8:9.61:0,10,71	0/0:31,0:25:65.14:0,65,867	0/0:30,0:29:80.05:0,80,1101	0/0:23,0:22:52.17:0,52,681	0/0:2,0:2:6.02:0,6,88
chr10	40137578	.	T	TTG	653.62	PASS	AB=0.977;AC=15;AF=0.268;AN=56;BaseQRankSum=1.708;DP=599;FS=12.480;HRun=0;HaplotypeScore=164.5104;InbreedingCoeff=-0.1810;MQ=56.24;MQ0=16;MQRankSum=-4.341;QD=2.30;ReadPosRankSum=0.676;VQSLOD=2.1861;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:29:15.84:16,0,160	0/0:15,0:13:30.64:0,31,293	0/0:53,0:20:18.52:0,19,164	0/1:40,0:15:10.09:13,0,10	0/1:25,0:22:64.31:64,0,90	0/1:21,1:21:1.28:1,0,485	0/0:17,0:15:26.83:0,27,277	0/0:26,0:24:61.59:0,62,351	0/1:15,0:15:5.81:6,0,278	0/1:23,1:24:79.49:79,0,201	0/0:25,0:22:19.52:0,20,292	0/0:17,0:17:14.92:0,15,157	0/1:17,0:17:35.66:36,0,99	0/1:17,0:17:23.60:28,0,24	0/1:17,0:16:34.05:107,0,34	0/1:12,2:13:19.92:138,0,20	1/1:17,5:21:4.28:204,4,0	0/0:18,0:16:25.63:0,26,288	0/0:25,0:23:54.88:0,55,334	0/0:22,0:19:48.16:0,48,271	0/0:10,0:7:20.25:0,20,132	0/1:19,0:20:43.68:82,0,44	0/1:11,0:10:16.78:17,0,19	0/1:9,0:8:13.03:15,0,13	0/0:31,0:25:60.69:0,61,345	0/0:31,0:30:34.75:0,35,314	0/0:23,0:22:51.53:0,52,269	0/0:2,0:2:5.54:0,6,27
chr10	40137584	.	G	GTTT	2943.26	PASS	AB=0.943;AC=32;AF=0.571;AN=56;BaseQRankSum=-0.900;DP=596;FS=0.837;HRun=2;HaplotypeScore=166.2450;InbreedingCoeff=0.4702;MQ=51.04;MQ0=22;MQRankSum=-1.495;QD=7.23;ReadPosRankSum=1.066;VQSLOD=-0.2426;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:27:0.97:1,0,155	1/1:12,3:13:23.18:219,23,0	0/1:51,0:17:34.22:34,0,84	0/0:35,0:11:3.86:0,4,24	0/1:22,0:19:6.54:57,0,7	1/1:17,0:16:29.21:196,29,0	1/1:13,0:15:35.99:278,36,0	0/0:30,0:29:8.63:0,9,444	1/1:14,0:15:34.45:243,34,0	0/1:10,13:23:2.26:365,0,2	1/1:21,1:21:26.90:273,27,0	1/1:17,0:17:31.06:186,31,0	0/1:17,0:17:4.84:5,0,92	0/1:16,0:16:1.43:1,0,29	0/1:16,0:15:2.01:71,0,2	1/1:15,0:14:14.56:208,15,0	1/1:23,0:21:24.53:282,25,0	1/1:19,0:17:28.10:191,28,0	0/0:27,0:22:37.68:0,38,506	0/0:26,0:21:34.92:0,35,409	0/0:10,0:7:20.96:0,21,208	1/1:17,0:17:6.19:126,6,0	1/1:9,1:11:27.76:285,28,0	1/1:8,1:8:4.78:65,5,0	0/0:32,0:23:35.54:0,36,423	0/1:31,1:31:42.81:43,0,455	0/0:25,0:24:33:0,33,316	0/0:2,0:2:1.90:0,2,25
chr10	40137587	.	G	GT	3584.33	PASS	AB=1.000;AC=32;AF=0.571;AN=56;BaseQRankSum=-7.787;DP=596;FS=0.430;HRun=7;HaplotypeScore=142.9467;InbreedingCoeff=0.4289;MQ=48.10;MQ0=23;MQRankSum=-1.412;QD=8.55;ReadPosRankSum=-0.266;VQSLOD=0.5204;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:70.33:0,70,484	0/1:13,0:11:7.25:7,0,13	0/1:48,0:15:6.29:6,0,81	0/0:36,0:11:6.31:0,6,30	0/0:23,0:18:17.55:0,18,117	1/1:17,0:16:29.02:134,29,0	1/1:17,0:15:31.17:215,31,0	1/1:23,9:30:47.74:493,48,0	1/1:15,0:15:18.85:106,19,0	0/1:22,0:21:20.34:46,0,20	0/1:24,0:20:22.93:32,0,23	0/1:17,0:17:16.02:23,0,16	0/0:17,0:17:39.56:0,40,258	0/0:17,0:17:28.41:0,28,195	0/0:16,0:15:14.64:0,15,110	0/1:15,0:14:0.86:1,0,86	0/0:23,0:21:18.65:0,19,149	0/1:19,0:17:2.55:3,0,8	1/1:16,13:23:15.92:426,16,0	1/1:16,10:21:38.39:400,38,0	1/1:8,4:7:3.36:133,3,0	0/0:15,0:15:9.74:0,10,110	0/1:12,0:11:14.74:17,0,15	1/1:10,0:8:3.69:13,4,0	1/1:14,18:23:49.77:504,50,0	1/1:20,13:31:26.46:568,26,0	1/1:11,12:22:33.30:420,33,0	1/1:1,1:2:3.90:38,4,0
chr10	40137599	.	T	TTG	1817.30	PASS	AB=0.942;AC=22;AF=0.393;AN=56;BaseQRankSum=2.244;DP=603;FS=2.889;HRun=0;HaplotypeScore=147.9044;InbreedingCoeff=0.1625;MQ=43.93;MQ0=23;MQRankSum=-3.185;QD=5.90;ReadPosRankSum=3.575;VQSLOD=3.2266;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:32,0:31:67.45:394,67,0	0/1:11,0:9:51.73:52,0,81	0/0:46,0:12:10.69:0,11,57	0/0:33,0:10:4.37:0,4,18	0/1:22,1:17:10.99:117,0,11	0/0:16,0:15:15.63:0,16,153	0/1:20,0:18:39.72:40,0,68	0/0:35,0:33:58.40:0,58,321	0/1:17,0:17:6.71:7,0,76	0/1:21,1:21:25.74:132,0,26	0/1:13,7:19:52.82:72,0,53	0/0:14,0:14:3.97:0,4,76	1/1:17,0:17:39.18:197,39,0	1/1:19,0:19:15.02:135,15,0	0/1:17,1:16:15.91:146,0,16	1/1:17,0:16:25.13:184,25,0	1/1:27,0:25:5.04:254,5,0	0/1:17,2:17:23.48:23,0,129	0/0:25,0:19:30.70:0,31,198	0/0:23,0:17:25.73:0,26,162	0/0:12,0:7:15.97:0,16,96	0/1:17,1:16:20.70:157,0,21	0/1:15,0:13:14.98:71,0,15	1/1:11,0:9:0.02:17,0,0	0/0:33,0:20:40.06:0,40,215	0/0:29,0:27:37.80:0,38,266	0/0:24,0:23:36.23:0,36,235	0/0:5,0:5:13.40:0,13,82
chr10	40137600	.	T	TG	1616.37	PASS	AB=0.985;AC=18;AF=0.321;AN=56;BaseQRankSum=2.912;DP=598;FS=16.037;HRun=0;HaplotypeScore=136.8472;InbreedingCoeff=0.1338;MQ=44.02;MQ0=24;MQRankSum=-2.331;QD=6.01;ReadPosRankSum=2.081;VQSLOD=2.8254;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,18:30:72.76:545,73,0	0/1:10,1:9:21.69:22,0,97	0/0:45,0:12:0.99:0,1,39	0/0:34,0:10:8.40:0,8,32	1/1:21,1:16:3.91:107,4,0	0/0:15,0:14:29.37:0,29,167	0/1:19,0:17:7.09:7,0,93	0/0:34,0:32:63.72:0,64,407	0/0:17,0:17:17.58:0,18,143	0/1:22,0:21:39.04:39,0,73	0/1:20,0:17:32.44:32,0,81	0/0:13,0:13:27.03:0,27,128	1/1:9,10:19:46.02:335,46,0	1/1:13,6:19:32.40:231,32,0	0/1:18,0:16:29.90:103,0,30	0/1:17,0:16:40.53:61,0,41	0/1:27,0:25:32.56:168,0,33	0/0:19,0:17:9.62:0,10,152	0/0:24,0:18:45.43:0,45,280	0/0:23,0:17:37.88:0,38,219	0/0:12,0:7:17.93:0,18,121	0/1:18,0:16:63.84:90,0,64	0/1:14,1:13:27.02:47,0,27	0/1:11,0:9:4.58:5,0,22	0/0:33,0:20:44.99:0,45,271	0/0:29,0:27:55.53:0,56,384	0/0:25,0:24:47.25:0,47,275	0/0:5,0:5:14.91:0,15,114
chr10	40138279	.	A	AT	6145.76	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-9.221;DP=629;FS=5.274;HRun=6;HaplotypeScore=65.2258;InbreedingCoeff=0.9937;MQ=76.19;MQ0=0;MQRankSum=-3.939;QD=32.01;ReadPosRankSum=0.957;VQSLOD=5.3632;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:72.15:0,72,728	1/1:3,11:14:33.11:414,33,0	0/0:14,0:14:29.98:0,30,277	0/0:15,0:15:12.65:0,13,282	1/1:1,31:32:87.24:1074,87,0	0/0:26,0:26:66.15:0,66,673	0/0:17,0:17:42.09:0,42,429	0/0:31,0:31:78.13:0,78,775	0/0:17,0:17:48.08:0,48,480	1/1:3,23:26:72.22:890,72,0	1/1:1,17:18:42.13:528,42,0	0/0:16,0:16:45.07:0,45,448	0/0:24,0:24:72.07:0,72,704	0/0:15,0:15:36.08:0,36,367	1/1:2,18:20:51.16:641,51,0	1/1:1,16:17:48.15:604,48,0	1/1:5,22:27:29.65:687,30,0	1/1:0,14:14:39.12:491,39,0	0/0:29,0:29:75.11:0,75,741	0/0:19,0:19:44.97:0,45,433	0/0:30,0:30:81.18:0,81,826	1/1:3,21:24:68.92:818,69,0	0/0:18,0:18:45.05:0,45,447	0/0:37,0:37:99:0,105,1064	0/0:29,0:29:81.17:0,81,819	0/0:20,1:21:16.38:0,16,483	0/0:37,0:37:99:0,105,1060	0/0:16,0:16:42.09:0,42,428
chr10	40138564	.	C	CGGGGCT	2931.09	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-3.043;DP=528;FS=17.559;HRun=0;HaplotypeScore=119.5718;InbreedingCoeff=0.9646;MQ=68.98;MQ0=14;MQRankSum=-8.319;QD=69.79;ReadPosRankSum=-0.674;VQSLOD=3.1892;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,15:18:36.12:1265,36,0	0/0:3,0:3:9.03:0,9,190	0/0:39,0:22:63.18:0,63,1379	0/0:44,0:23:30.08:0,30,1257	0/0:16,0:16:42.11:0,42,866	0/0:22,0:22:57.20:0,57,1310	0/0:9,0:8:21.07:0,21,490	0/0:19,0:19:51.09:0,51,1047	0/0:18,0:18:51.15:0,51,1142	0/0:21,0:21:51.17:0,51,1118	0/0:24,0:24:60.19:0,60,1353	0/0:13,0:13:20.58:0,21,709	1/1:5,8:13:24.08:801,24,0	1/1:3,8:11:30.10:1008,30,0	0/0:15,0:15:39.13:0,39,888	0/0:20,0:20:54.19:0,54,1241	0/0:32,0:32:87.30:0,87,2026	0/0:28,0:28:52.23:0,52,1507	0/0:18,0:18:42.14:0,42,959	0/0:16,0:16:48.12:0,48,1067	0/0:23,0:23:66.23:0,66,1538	0/0:13,0:13:36.12:0,36,838	0/0:17,0:17:42.14:0,42,923	0/0:8,0:8:15.05:0,15,350	0/0:21,0:21:60.21:0,60,1377	0/0:27,0:27:72.25:0,72,1644	0/0:14,0:14:39.13:0,39,908	0/0:6,0:5:15.05:0,15,349
chr10	40138650	.	AAG	A	827.15	PASS	AB=0.990;AC=24;AF=0.429;AN=56;BaseQRankSum=-0.637;DP=583;FS=14.166;HRun=0;HaplotypeScore=96.2983;InbreedingCoeff=-0.5647;MQ=47.39;MQ0=53;MQRankSum=0.734;QD=1.62;ReadPosRankSum=1.475;VQSLOD=0.3824;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:23:23.08:23,0,174	0/1:10,0:10:33.60:66,0,34	0/1:83,1:12:42.10:58,0,42	0/1:91,0:12:8.66:9,0,93	0/1:25,1:25:87.63:97,0,88	0/1:12,0:12:16.82:45,0,17	0/0:7,0:7:3.52:0,4,56	0/1:27,0:26:14.28:14,0,178	0/0:9,0:9:4.91:0,5,23	0/1:20,1:19:80.27:92,0,80	0/1:17,0:16:20.10:105,0,20	0/1:16,1:16:41.17:41,0,62	0/1:5,0:5:10.19:10,0,18	0/0:10,0:10:4.51:0,5,47	0/1:16,0:15:42.77:72,0,43	0/1:19,1:20:47.46:47,0,97	1/1:24,0:21:4.03:107,4,0	0/1:23,0:22:45.32:45,0,60	0/1:18,0:16:20.56:21,0,134	0/0:13,0:13:11.44:0,11,103	1/1:2,0:2:5.65:31,6,0	0/1:10,0:10:14:14,0,55	0/1:16,0:16:47.10:47,0,82	0/0:7,0:6:0.77:0,1,27	0/1:13,0:13:6.87:7,0,28	0/0:25,0:23:0.93:0,1,142	0/1:21,0:20:15.73:16,0,73	0/1:14,0:12:8.12:8,0,23
chr10	40138658	.	C	CA	379.46	PASS	AB=0.891;AC=20;AF=0.357;AN=56;BaseQRankSum=6.334;DP=582;FS=62.612;HRun=0;HaplotypeScore=95.8479;InbreedingCoeff=0.0905;MQ=51.70;MQ0=50;MQRankSum=0.131;QD=1.54;ReadPosRankSum=4.062;VQSLOD=-0.6696;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:20:19.90:0,20,117	0/1:9,0:9:4.22:4,0,61	0/0:92,0:17:17.69:0,18,152	0/0:92,0:12:17.47:0,17,141	0/1:24,1:25:39.09:39,0,101	0/0:13,0:13:29.43:0,29,320	0/0:8,0:8:15.05:0,15,189	0/1:26,0:25:0.85:1,0,20	0/0:9,0:9:6.01:0,6,61	0/0:20,1:20:16.22:0,16,190	0/0:16,0:15:26.10:0,26,115	0/0:18,0:17:38.74:0,39,384	0/1:6,0:6:2.94:21,0,3	0/1:9,0:9:2.59:3,0,25	0/1:8,6:13:23.79:66,0,24	0/1:13,8:21:27.49:27,0,44	0/1:21,3:22:36.43:82,0,36	0/0:24,1:24:10.56:0,11,164	0/1:13,0:14:31.67:32,0,33	1/1:11,0:12:1.56:12,2,0	1/1:0,0:2:2.80:13,3,0	0/1:7,1:8:14.17:14,0,20	0/0:13,0:13:35.19:0,35,354	0/0:7,0:6:5.69:0,6,52	1/1:11,0:13:11.35:52,11,0	1/1:6,1:24:18.22:115,18,0	0/1:16,0:19:1.93:48,0,2	0/1:13,0:13:13.66:14,0,19
chr10	40138659	.	C	CAA	2399.19	PASS	AB=0.967;AC=31;AF=0.554;AN=56;BaseQRankSum=5.377;DP=610;FS=10.728;HRun=15;HaplotypeScore=110.4022;InbreedingCoeff=0.3726;MQ=51.42;MQ0=50;MQRankSum=-6.911;QD=5.91;ReadPosRankSum=-0.600;VQSLOD=-0.2297;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:20:21.56:28,0,22	0/1:9,0:9:7.96:8,0,72	0/1:90,0:17:12.24:12,0,33	0/0:93,0:13:7.79:0,8,41	0/1:20,7:27:55.22:170,0,55	0/0:14,0:14:13.58:0,14,95	0/0:8,0:8:11.78:0,12,89	1/1:31,0:30:34.38:231,34,0	0/0:9,0:9:2.71:0,3,14	0/1:21,0:21:0.03:0,0,119	0/0:16,0:15:16.58:0,17,114	0/0:18,0:17:18.68:0,19,140	1/1:6,0:6:14.78:96,15,0	1/1:9,0:9:4.38:21,4,0	1/1:16,0:15:2.80:157,3,0	0/1:21,0:21:27.24:42,0,27	0/1:24,0:22:29.80:102,0,30	0/0:26,0:25:4.58:0,5,141	1/1:18,0:18:32.40:263,32,0	1/1:15,0:15:18.35:160,18,0	1/1:2,0:2:3:28,3,0	1/1:9,0:9:11.60:95,12,0	0/0:13,0:13:14.94:0,15,147	0/0:7,0:6:1.15:0,1,18	1/1:14,0:15:22.06:186,22,0	1/1:27,0:27:69.71:591,70,0	1/1:21,0:21:24.93:252,25,0	1/1:15,0:13:23.84:142,24,0
chr10	40140238	.	CA	C	1441.63	PASS	AB=0.790;AC=24;AF=0.429;AN=56;BaseQRankSum=4.940;DP=512;FS=5.435;HRun=16;HaplotypeScore=62.1004;InbreedingCoeff=0.3623;MQ=69.38;MQ0=10;MQRankSum=0.916;QD=4.76;ReadPosRankSum=2.940;VQSLOD=1.7034;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:10,22:32:15.79:201,0,16	0/0:3,0:3:8.98:0,9,72	0/0:27,0:14:10.55:0,11,115	0/0:28,0:15:3.01:0,3,25	0/0:20,1:24:20.67:0,21,256	0/0:10,0:10:17.95:0,18,143	0/0:15,1:17:13.90:0,14,249	0/1:13,17:32:8.90:237,0,9	0/1:5,2:7:6.03:6,0,64	0/0:18,1:21:13.83:0,14,302	0/1:9,3:12:24.54:25,0,124	0/0:18,0:17:20.94:0,21,168	1/1:4,8:10:11.76:72,12,0	1/1:4,8:12:13.69:76,14,0	0/0:14,1:15:8.92:0,9,176	0/1:16,3:19:15.09:15,0,208	0/1:27,3:31:0.50:0,0,393	0/0:14,0:14:26.74:0,27,207	0/1:11,2:12:33.67:42,0,34	1/1:6,14:22:43.45:248,43,0	1/1:8,13:22:9.01:159,9,0	0/1:12,0:13:8.37:8,0,79	0/0:13,3:16:8.95:0,9,181	0/0:9,1:15:6.98:0,7,200	1/1:5,12:22:33.63:173,34,0	1/1:9,11:21:19.96:169,20,0	1/1:2,11:17:23.71:123,24,0	1/1:6,6:10:1.30:73,1,0
chr10	40140419	.	TCACACACACACACACACACA	T	3194.42	PASS	AB=0.867;AC=8;AF=0.143;AN=56;BaseQRankSum=6.943;DP=470;FS=26.099;HRun=0;HaplotypeScore=213.6496;InbreedingCoeff=0.5125;MQ=64.45;MQ0=10;MQRankSum=-5.882;QD=42.03;ReadPosRankSum=-0.335;VQSLOD=1.2241;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:32:33.11:0,33,1333	0/0:2,0:2:6.02:0,6,487	0/0:33,0:16:2.97:0,3,162	0/0:45,0:23:3.01:0,3,46	1/1:9,12:24:15.05:690,15,0	0/0:22,0:22:9.03:0,9,579	0/0:23,0:21:21.07:0,21,1202	0/0:12,0:12:6.02:0,6,319	0/0:13,0:11:21.07:0,21,1296	0/0:13,0:13:24.08:0,24,1557	0/0:9,0:9:6.02:0,6,456	0/0:7,0:17:39.13:0,39,2751	0/0:5,0:7:6.02:0,6,273	0/0:8,0:9:15.05:0,15,564	1/1:7,10:18:27.09:1416,27,0	1/1:7,4:11:15.05:756,15,0	0/1:13,0:14:99:153,0,185	0/0:23,0:23:30.10:0,30,1308	0/0:8,0:8:12.04:0,12,670	0/0:10,0:10:9.03:0,9,765	0/0:22,0:22:45.12:0,45,2816	0/1:6,2:8:32.53:328,0,33	0/0:8,0:11:21.07:0,21,1561	0/0:20,0:23:39.13:0,39,2686	0/0:5,0:6:12.04:0,12,478	0/0:20,0:20:37.68:0,38,2819	0/0:23,0:23:36.12:0,36,2673	0/0:9,0:9:17.09:0,17,1096
chr10	40140433	.	A	ACA	171.93	PASS	AB=1.000;AC=19;AF=0.396;AN=48;BaseQRankSum=-3.886;DP=527;FS=0.000;HRun=0;HaplotypeScore=100.1774;InbreedingCoeff=0.3710;MQ=53.26;MQ0=18;MQRankSum=2.624;QD=0.85;ReadPosRankSum=-2.259;VQSLOD=1.3454;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:36:2.84:0,3,14	1/1:4,0:4:2.99:24,3,0	./.	./.	0/0:23,0:23:8.48:0,8,41	1/1:24,0:24:3:26,3,0	1/1:27,0:24:2.99:24,3,0	./.	1/1:15,0:13:10.55:94,11,0	1/1:15,0:14:3:28,3,0	1/1:10,0:10:3.01:39,3,0	0/0:24,0:24:28.40:0,28,140	0/1:10,0:10:0:0,0,0	0/0:16,0:13:11.62:0,12,71	0/0:15,0:15:25.57:0,26,125	0/0:11,0:10:11.32:0,11,54	0/0:10,0:10:2.84:0,3,14	0/0:21,4:23:1.35:0,1,3	0/1:8,0:8:0:0,0,0	./.	0/1:30,0:28:22.64:54,0,23	0/0:9,0:8:5.68:0,6,28	0/1:21,0:21:12.25:12,0,36	0/0:30,0:30:14.33:0,14,88	0/0:12,0:12:2.98:0,3,21	0/1:30,0:28:0:0,0,0	0/0:24,0:24:2.13:0,2,22	1/1:8,0:8:0.47:1,0,0
chr10	40142083	.	ATT	A	2043.99	PASS	AB=0.613;AC=22;AF=0.393;AN=56;BaseQRankSum=-2.142;DP=617;FS=1.412;HRun=17;HaplotypeScore=99.7666;InbreedingCoeff=0.8344;MQ=69.43;MQ0=7;MQRankSum=-2.806;QD=8.62;ReadPosRankSum=5.298;VQSLOD=1.3112;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,0:20:31.29:138,31,0	1/1:6,2:10:9.40:67,9,0	0/0:45,0:16:19.44:0,19,132	0/0:36,0:15:24.37:0,24,195	0/1:8,7:17:2.49:136,0,2	0/0:6,0:28:36.05:0,36,355	0/0:10,0:17:17.97:0,18,163	0/0:30,1:31:23.28:0,23,243	0/0:9,0:23:21.09:0,21,202	1/1:9,17:28:53.10:399,53,0	1/1:2,8:11:11.16:82,11,0	0/0:7,0:18:24:0,24,233	1/1:10,0:24:37.10:152,37,0	1/1:6,0:16:25.22:111,25,0	1/1:13,10:26:34.72:245,35,0	1/1:16,14:33:40.51:335,41,0	0/1:5,11:20:36.82:174,0,37	1/1:5,12:18:26.69:253,27,0	0/0:15,0:14:23.82:0,24,162	0/0:28,1:29:38.43:0,38,261	0/0:25,1:26:7:0,7,181	1/1:5,7:14:23.30:167,23,0	0/0:17,0:20:35.37:0,35,340	0/0:6,0:13:24.05:0,24,254	0/0:23,0:23:28.74:0,29,235	0/0:19,0:20:17.43:0,17,181	0/0:29,0:29:12.45:0,12,200	0/0:4,0:4:8.96:0,9,69
chr10	40142098	.	T	TG	458.06	PASS	AB=0.953;AC=10;AF=0.179;AN=56;BaseQRankSum=3.968;DP=627;FS=4.692;HRun=0;HaplotypeScore=114.1408;InbreedingCoeff=0.0653;MQ=68.87;MQ0=14;MQRankSum=-1.887;QD=2.52;ReadPosRankSum=0.982;VQSLOD=2.9013;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:20:7.51:0,8,97	0/0:8,0:8:20.67:0,21,141	0/0:63,0:19:26.88:0,27,271	0/0:53,0:21:19.73:0,20,170	0/0:21,0:21:47.97:0,48,340	0/0:29,0:29:45.83:0,46,302	0/0:12,0:12:23.35:0,23,167	0/1:25,3:28:99:155,0,193	0/0:21,0:21:16.62:0,17,114	0/0:30,0:30:57.38:0,57,488	0/0:13,0:13:28.93:0,29,205	0/0:20,0:20:35.87:0,36,269	0/0:20,0:20:32.32:0,32,197	0/1:16,0:16:0.66:1,0,104	0/0:16,0:16:47.16:0,47,308	0/0:28,0:27:64.81:0,65,433	0/0:21,0:21:53.06:0,53,361	0/0:22,0:22:26.56:0,27,297	0/1:14,1:13:65.23:74,0,65	0/1:29,1:29:68.54:124,0,69	0/1:21,2:22:22.61:58,0,23	0/0:15,0:15:38.51:0,39,269	0/0:18,0:18:42.18:0,42,327	0/0:13,0:13:22.59:0,23,156	0/1:15,2:17:25.45:51,0,25	0/1:19,0:19:55.15:55,0,56	1/1:28,1:29:6.11:74,6,0	0/1:5,0:5:0.60:1,0,2
chr10	40142099	.	T	TGG	4047.06	PASS	AB=1.000;AC=20;AF=0.357;AN=56;BaseQRankSum=-3.749;DP=619;FS=9.531;HRun=0;HaplotypeScore=113.5391;InbreedingCoeff=0.6829;MQ=69.72;MQ0=14;MQRankSum=0.377;QD=14.51;ReadPosRankSum=0.310;VQSLOD=2.9959;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:20,0:19:90.22:139,0,90	0/0:7,0:7:20.98:0,21,200	0/1:63,0:20:2.43:2,0,343	0/0:54,0:21:15.45:0,15,226	0/0:21,0:21:38.50:0,39,470	0/0:29,0:29:50.91:0,51,555	0/0:11,0:11:20.55:0,21,191	1/1:10,19:30:57.02:776,57,0	0/0:20,0:20:16.20:0,16,156	0/0:31,0:31:68.89:0,69,704	0/0:13,0:13:32.94:0,33,330	0/0:19,0:19:34.83:0,35,393	0/1:20,0:20:54.94:55,0,240	0/1:16,0:16:99:126,0,143	0/0:16,0:16:47.95:0,48,440	0/0:27,0:26:54.67:0,55,603	0/0:21,0:21:47.90:0,48,447	0/0:22,0:22:56.78:0,57,513	1/1:3,8:10:26.92:375,27,0	1/1:10,18:31:56.27:701,56,0	1/1:8,12:22:8.93:346,9,0	0/0:15,0:15:38.49:0,38,372	0/0:20,0:20:49.69:0,50,470	0/0:14,0:14:26.71:0,27,243	1/1:3,12:17:11.25:439,11,0	1/1:9,7:16:40.97:542,41,0	1/1:2,18:25:17.81:402,18,0	1/1:0,4:5:9.03:144,9,0
chr10	40142107	.	G	GGTTTT	2157.83	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=7.631;DP=587;FS=1.350;HRun=0;HaplotypeScore=151.0563;InbreedingCoeff=0.9485;MQ=67.80;MQ0=13;MQRankSum=-8.749;QD=29.97;ReadPosRankSum=0.556;VQSLOD=3.7035;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:16,1:28:45.15:921,45,0	0/0:9,0:9:24.08:0,24,427	0/0:54,0:20:28.20:0,28,518	0/0:52,0:21:23.87:0,24,296	0/0:21,0:21:48.15:0,48,850	0/0:27,0:27:39.13:0,39,720	0/0:14,0:14:27.07:0,27,431	0/0:28,0:28:48.05:0,48,605	0/0:11,0:11:12.04:0,12,176	0/0:30,0:30:63.18:0,63,1135	0/0:16,0:16:24.07:0,24,421	0/0:13,0:13:27.09:0,27,510	1/1:20,0:25:36.09:685,36,0	1/1:9,0:18:33.11:694,33,0	0/0:19,0:19:39.12:0,39,705	0/0:27,0:26:51.13:0,51,908	0/0:21,0:21:33.10:0,33,592	0/0:23,0:23:44.10:0,44,804	0/0:12,0:10:17.98:0,18,236	0/0:24,0:23:46.03:0,46,540	0/0:15,0:14:11.99:0,12,175	0/0:16,0:16:33.10:0,33,585	0/0:16,0:16:33.10:0,33,584	0/0:11,0:11:18.06:0,18,337	0/0:14,0:14:30.08:0,30,355	0/0:16,0:16:26.86:0,27,321	0/0:20,0:20:24.03:0,24,259	0/0:5,0:5:9.03:0,9,102
chr10	40142395	.	CGT	C	2404.56	PASS	AB=0.981;AC=22;AF=0.393;AN=56;BaseQRankSum=4.432;DP=649;FS=0.000;HRun=0;HaplotypeScore=132.7868;InbreedingCoeff=0.7809;MQ=64.55;MQ0=7;MQRankSum=1.549;QD=8.21;ReadPosRankSum=-1.511;VQSLOD=3.2087;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:95.89:0,96,999	0/0:12,0:12:21.04:0,21,287	0/0:27,0:8:2.95:0,3,25	0/0:23,0:13:5.77:0,6,34	0/0:17,0:18:29.93:0,30,310	1/1:11,6:18:35.23:345,35,0	1/1:18,10:29:48.31:479,48,0	0/1:24,0:24:5.02:178,0,5	1/1:4,16:20:24.07:284,24,0	0/1:24,1:25:22.18:22,0,491	0/0:9,0:9:12.01:0,12,168	0/0:24,0:24:29.78:0,30,580	0/0:25,0:25:50.90:0,51,495	0/0:25,0:25:41.99:0,42,427	0/0:17,0:17:30.02:0,30,285	0/0:8,0:8:12.02:0,12,123	0/0:37,1:38:34.08:0,34,607	0/0:28,1:29:21.64:0,22,682	1/1:17,0:16:23.01:143,23,0	1/1:9,0:10:8.77:54,9,0	1/1:82,0:80:76.97:516,77,0	0/0:12,0:12:24.03:0,24,261	0/0:6,0:6:12.03:0,12,167	0/0:30,1:31:32.99:0,33,476	1/1:19,0:19:7.57:170,8,0	1/1:21,1:22:38.40:252,38,0	1/1:18,0:17:11.76:111,12,0	1/1:9,0:9:8.90:60,9,0
chr10	40142415	.	TGTGC	T	5029.32	PASS	AB=1.000;AC=18;AF=0.321;AN=56;BaseQRankSum=-4.900;DP=581;FS=1.309;HRun=0;HaplotypeScore=158.4964;InbreedingCoeff=0.7530;MQ=56.84;MQ0=5;MQRankSum=4.366;QD=20.87;ReadPosRankSum=-2.165;VQSLOD=4.0422;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,105,1896	0/0:11,0:11:21.04:0,21,430	0/0:15,0:3:5.96:0,6,67	0/0:11,0:4:8.37:0,8,43	0/0:16,0:16:29.96:0,30,491	0/1:21,0:21:59.01:59,0,70	0/1:26,0:26:60.88:61,0,158	1/1:2,29:31:42.81:718,43,0	0/0:19,0:19:25.67:0,26,163	0/0:21,0:21:41.08:0,41,864	0/0:10,0:10:12:0,12,265	0/0:21,0:21:25.15:0,25,1006	0/0:22,0:22:56.73:0,57,854	0/0:21,0:21:47.85:0,48,849	0/0:17,0:17:30.06:0,30,419	0/0:9,0:9:12.04:0,12,212	0/0:34,0:34:80.41:0,80,1218	0/0:25,0:25:68.73:0,69,1291	1/1:2,16:17:47.94:571,48,0	1/1:7,3:10:6.32:206,6,0	1/1:5,69:72:78.10:1500,78,0	0/0:14,0:14:24.05:0,24,427	0/0:8,0:8:12.03:0,12,271	0/0:23,0:23:33.08:0,33,799	1/1:1,20:21:8.12:542,8,0	1/1:1,17:18:53.92:847,54,0	1/1:2,14:15:12.02:347,12,0	1/1:0,6:6:9.03:178,9,0
chr10	40142429	.	CCAGACAGA	C	2605.68	PASS	AB=0.676;AC=26;AF=0.500;AN=52;BaseQRankSum=-0.019;DP=537;FS=22.226;HRun=0;HaplotypeScore=194.5325;InbreedingCoeff=0.8383;MQ=54.01;MQ0=4;MQRankSum=-9.319;QD=10.95;ReadPosRankSum=1.024;VQSLOD=0.5942;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:46:56.21:0,56,1838	1/1:2,8:10:14.98:268,15,0	./.	0/0:9,0:3:5.99:0,6,145	1/1:8,3:13:2.91:43,3,0	1/1:4,13:17:17.98:341,18,0	1/1:17,8:26:11.41:80,11,0	0/0:28,0:28:24.08:0,24,756	1/1:10,6:16:17.91:233,18,0	1/1:7,5:12:10.76:299,11,0	0/1:3,8:11:0.03:0,0,0	1/1:11,10:21:14.92:210,15,0	0/0:15,0:18:30.10:0,30,918	0/0:16,0:21:24.03:0,24,732	1/1:4,11:20:14.97:245,15,0	1/1:3,4:9:17.85:169,18,0	1/1:22,2:32:30.02:590,30,0	1/1:15,6:21:12.04:301,12,0	0/0:16,0:16:21.07:0,21,859	0/0:6,0:12:15.14:0,15,269	0/0:64,0:62:45.14:0,45,1668	1/1:7,6:13:2.97:20,3,0	./.	0/1:12,5:17:0:0,0,0	0/0:16,0:16:18.06:0,18,632	0/0:23,0:23:41.72:0,42,1501	0/0:14,0:15:10.07:0,10,490	0/0:9,0:9:12.04:0,12,493
chr10	40143063	.	G	GA	3747.43	PASS	AB=0.978;AC=22;AF=0.393;AN=56;BaseQRankSum=-7.775;DP=561;FS=8.518;HRun=10;HaplotypeScore=60.1812;InbreedingCoeff=0.7367;MQ=68.61;MQ0=10;MQRankSum=1.283;QD=14.64;ReadPosRankSum=2.271;VQSLOD=3.4295;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:31:78.95:0,79,625	1/1:3,10:13:8.44:294,8,0	0/1:19,0:10:1.97:2,0,109	0/1:22,0:11:11.59:12,0,89	1/1:7,17:25:23.34:436,23,0	0/0:19,1:21:23.99:0,24,393	0/0:19,0:19:50.92:0,51,415	0/0:22,0:23:58.72:0,59,471	0/0:15,0:16:37.58:0,38,286	1/1:3,13:16:17.36:362,17,0	1/1:6,18:26:59.88:604,60,0	0/0:23,0:23:47.89:0,48,390	0/0:17,0:17:35.93:0,36,295	0/0:17,0:17:41.93:0,42,345	1/1:7,11:18:22.80:413,23,0	1/1:2,14:16:30.08:320,30,0	1/1:7,22:30:62.83:637,63,0	1/1:7,20:27:16.75:475,17,0	0/1:19,1:19:2.09:2,0,192	0/0:31,0:31:80.90:0,81,665	0/0:7,0:7:11.98:0,12,99	1/1:3,7:10:18.04:190,18,0	0/1:12,0:12:1.72:2,0,192	0/0:15,0:15:44.95:0,45,369	0/0:14,0:14:38.94:0,39,319	0/0:27,0:27:56.91:0,57,468	0/0:31,0:31:71.42:0,71,572	0/0:12,1:13:0.98:0,1,214
chr10	40144414	.	T	TTTTGTTTG	8344.75	PASS	AB=0.617;AC=23;AF=0.411;AN=56;BaseQRankSum=-2.260;DP=674;FS=2.042;HRun=0;HaplotypeScore=168.8834;InbreedingCoeff=0.8570;MQ=62.11;MQ0=2;MQRankSum=-3.532;QD=27.27;ReadPosRankSum=-1.039;VQSLOD=4.4123;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:25:9.03:0,9,167	1/1:7,5:14:17.96:532,18,0	0/0:27,0:21:9:0,9,97	0/0:24,0:21:3:0,3,26	0/1:19,19:50:8.20:1856,0,8	0/0:27,0:27:54.15:0,54,1203	0/0:21,0:21:30.28:0,30,720	0/0:39,0:41:30.04:0,30,452	0/0:20,0:20:42.09:0,42,937	1/1:12,8:24:39.10:1053,39,0	1/1:8,2:14:11.97:328,12,0	1/1:7,0:18:13.96:223,14,0	0/0:9,0:23:42.14:0,42,764	0/0:7,0:24:36.59:0,37,671	1/1:16,13:32:30.10:1209,30,0	1/1:9,12:24:18.06:735,18,0	1/1:9,3:16:14.94:489,15,0	1/1:19,0:20:3.01:46,3,0	0/0:23,0:23:21.07:0,21,498	0/0:26,0:26:57.18:0,57,1332	0/0:10,0:10:24.08:0,24,601	1/1:23,11:39:33.11:1291,33,0	1/1:15,0:29:35.93:304,36,0	1/1:8,0:25:35.60:279,36,0	0/0:13,0:13:36.11:0,36,796	0/0:19,0:19:33.11:0,33,826	0/0:31,0:32:54.17:0,54,1262	0/0:12,0:12:21.07:0,21,526
chr10	40146132	.	CATTTTAAA	C	6508.03	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=12.873;DP=573;FS=12.105;HRun=0;HaplotypeScore=148.6857;InbreedingCoeff=0.9984;MQ=74.37;MQ0=0;MQRankSum=-13.937;QD=59.71;ReadPosRankSum=0.356;VQSLOD=3.7839;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:66.23:0,66,2720	0/0:11,0:11:24.08:0,24,1045	0/0:12,0:11:24.08:0,24,887	0/0:16,0:16:36.59:0,37,1152	0/0:32,0:32:90.31:0,90,3784	1/1:1,21:22:60.21:1650,60,0	1/1:5,11:16:27.09:741,27,0	0/0:37,0:37:99:0,108,4497	1/1:0,16:16:48.16:1320,48,0	0/0:24,0:24:63.22:0,63,2678	0/0:25,0:25:69.24:0,69,3004	1/1:3,20:23:39.13:1072,39,0	0/0:20,0:20:54.19:0,54,2228	0/0:22,0:22:57.20:0,57,2337	0/0:15,0:15:45.15:0,45,1899	0/0:13,0:13:30.10:0,30,1259	0/0:12,0:12:30.10:0,30,1240	0/0:18,0:18:54.19:0,54,2323	0/0:21,0:21:57.20:0,57,2374	0/0:31,0:31:75.24:0,75,3110	0/0:27,0:27:75.24:0,75,3039	0/0:12,0:12:33.11:0,33,1377	1/1:3,15:18:36.12:989,36,0	1/1:3,11:14:26.85:737,27,0	0/0:27,0:27:78.27:0,78,3280	0/0:23,0:23:60.21:0,60,2487	0/0:28,0:28:84.27:0,84,3538	0/0:16,0:16:48.16:0,48,2090
chr10	40147926	.	CTT	C	3145.62	PASS	AB=0.900;AC=17;AF=0.304;AN=56;BaseQRankSum=1.387;DP=541;FS=5.556;HRun=14;HaplotypeScore=79.9030;InbreedingCoeff=0.8725;MQ=75.40;MQ0=4;MQRankSum=-0.366;QD=15.42;ReadPosRankSum=2.156;VQSLOD=3.0171;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:25:57.05:0,57,715	0/0:3,0:6:7.13:0,7,90	0/0:45,0:19:23.37:0,23,201	0/0:25,0:15:20.46:0,20,190	0/0:18,0:20:55.65:0,56,658	0/0:3,0:17:39.06:0,39,395	0/0:5,0:7:15.02:0,15,153	1/1:12,27:39:80.97:749,81,0	0/0:3,0:11:24.03:0,24,238	0/0:25,0:29:34.62:0,35,661	0/0:24,0:30:46.86:0,47,805	0/0:5,0:17:45.09:0,45,483	0/0:14,0:15:41.07:0,41,467	0/0:18,1:21:22.63:0,23,464	0/0:17,0:17:47.37:0,47,634	0/0:5,0:5:12.03:0,12,151	0/0:8,0:8:18.06:0,18,252	0/1:8,1:9:28.49:28,0,246	1/1:5,12:19:9.48:286,9,0	1/1:7,25:37:66.87:610,67,0	1/1:3,5:8:11.95:111,12,0	0/0:12,0:13:32.58:0,33,412	0/0:9,0:18:36.53:0,37,378	0/0:5,0:8:14.76:0,15,157	1/1:5,15:23:41.35:404,41,0	1/1:3,21:25:55.62:511,56,0	1/1:6,19:27:56.78:512,57,0	1/1:8,9:16:14.79:139,15,0
chr10	40148917	.	TACACAC	T	2608.84	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-1.636;DP=789;FS=1.959;HRun=0;HaplotypeScore=199.8049;InbreedingCoeff=0.8822;MQ=52.54;MQ0=7;MQRankSum=-8.655;QD=26.90;ReadPosRankSum=3.954;VQSLOD=3.5673;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,34:42:42.14:908,42,0	0/0:5,0:5:9.03:0,9,303	0/0:27,0:14:21.07:0,21,527	0/0:20,0:14:14.87:0,15,428	0/0:19,0:20:51.15:0,51,1410	0/0:6,0:21:21.05:0,21,440	0/0:8,0:29:21.05:0,21,314	0/0:18,0:31:56.98:0,57,1133	0/0:3,0:24:33.09:0,33,602	0/0:48,0:49:99:0,117,3522	0/0:24,0:25:65.87:0,66,1957	0/0:7,0:32:6.02:0,6,158	1/1:3,21:24:39.13:822,39,0	1/1:4,26:31:48.16:1021,48,0	0/0:36,0:36:99:0,108,3512	0/0:27,0:27:75.26:0,75,2395	0/0:34,0:34:58.27:0,58,2471	0/0:28,0:28:69.21:0,69,2140	0/0:11,0:24:42.13:0,42,917	0/0:12,0:29:42.01:0,42,947	0/0:21,0:31:9.02:0,9,171	0/0:31,0:31:78.12:0,78,2270	0/0:23,0:22:17.37:0,17,311	0/0:36,0:36:10.25:0,10,99	0/0:8,0:36:62.60:0,63,1156	0/0:10,0:36:93.15:0,93,2014	0/0:7,0:24:32.07:0,32,706	0/0:2,0:11:9.03:0,9,237
chr10	40149961	.	AAGGAGCCCATGACCTGTC	A	7656.91	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=11.476;DP=587;FS=4.273;HRun=0;HaplotypeScore=280.8639;InbreedingCoeff=0.9908;MQ=84.60;MQ0=0;MQRankSum=-11.430;QD=75.81;ReadPosRankSum=3.140;VQSLOD=4.2112;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,123,9899	0/0:9,0:9:27.09:0,27,2170	0/0:22,0:22:54.18:0,54,3065	0/0:19,0:19:39.12:0,39,2131	0/0:26,0:26:69.24:0,69,5360	1/1:3,16:19:36.12:1805,36,0	1/1:4,15:19:27.09:1353,27,0	0/0:25,0:25:60.20:0,60,3386	1/1:2,11:13:18.06:902,18,0	0/0:12,0:12:30.10:0,30,1973	0/0:18,0:18:48.16:0,48,3753	1/1:3,14:17:33.11:1654,33,0	0/0:18,0:18:48.15:0,48,3400	0/0:23,0:23:60.10:0,60,4494	0/0:21,0:21:57.17:0,57,4346	0/0:15,0:15:36.08:0,36,2020	0/0:35,0:35:96.29:0,96,6810	0/0:21,0:21:63.19:0,63,4731	0/0:26,0:26:60.19:0,60,4041	0/0:18,0:18:54.17:0,54,4168	0/0:44,0:44:99:0,117,8196	0/0:7,0:7:15.05:0,15,1087	1/1:3,14:17:24.08:1202,24,0	1/1:5,11:16:15.05:741,15,0	0/0:17,0:17:48.16:0,48,3577	0/0:24,0:24:63.22:0,63,4845	0/0:28,0:28:66.23:0,66,5457	0/0:12,0:12:33.11:0,33,2605
chr10	40152236	.	A	AT	1920.23	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-9.942;DP=580;FS=3.985;HRun=7;HaplotypeScore=52.2848;InbreedingCoeff=0.9979;MQ=74.76;MQ0=0;MQRankSum=-3.732;QD=27.05;ReadPosRankSum=1.525;VQSLOD=4.4574;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,28:34:84.26:1012,84,0	0/0:12,0:12:33.05:0,33,319	0/0:10,0:10:30.05:0,30,290	0/0:10,0:10:26.37:0,26,224	0/0:29,0:29:84.13:0,84,811	0/0:22,0:22:51.06:0,51,487	0/0:12,0:12:30.03:0,30,284	0/0:40,0:40:99:0,114,1096	0/0:16,0:16:30.04:0,30,290	0/0:38,0:38:99:0,99,949	0/0:22,0:22:60.09:0,60,578	0/0:10,0:10:24.04:0,24,232	1/1:3,19:22:51.16:616,51,0	1/1:2,13:15:36.11:435,36,0	0/0:24,0:24:66.04:0,66,622	0/0:15,0:15:42.07:0,42,406	0/0:32,0:32:84.10:0,84,804	0/0:14,0:14:33.05:0,33,319	0/0:14,0:14:39.04:0,39,367	0/0:23,0:23:66.10:0,66,637	0/0:13,0:13:33.04:0,33,313	0/0:26,0:26:66.10:0,66,637	0/0:18,0:18:51.08:0,51,493	0/0:13,0:13:36.04:0,36,341	0/0:33,0:33:93.15:0,93,898	0/0:21,0:21:60.08:0,60,574	0/0:19,0:19:57.09:0,57,550	0/0:23,0:23:69.11:0,69,666
chr10	40153468	.	CGA	C	6291.32	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=13.729;DP=675;FS=1.563;HRun=0;HaplotypeScore=78.3278;InbreedingCoeff=0.9894;MQ=86.00;MQ0=2;MQRankSum=-1.827;QD=39.32;ReadPosRankSum=3.069;VQSLOD=6.5972;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:41:99:0,126,2406	0/0:5,0:5:15.04:0,15,244	0/0:18,0:19:51.17:0,51,923	0/0:25,0:25:69.70:0,70,1221	0/0:25,0:25:75.26:0,75,1425	1/1:0,23:23:69.23:1056,69,0	1/1:0,27:27:72.24:1101,72,0	0/0:33,0:33:93.29:0,93,1699	1/1:0,25:25:66.22:1010,66,0	0/0:20,0:20:60.19:0,60,1089	0/0:28,0:28:81.27:0,81,1522	1/1:1,29:29:72.24:1102,72,0	0/0:24,0:24:69.22:0,69,1276	0/0:19,1:20:11.27:0,11,997	0/0:28,0:28:84.29:0,84,1610	0/0:24,0:24:72.23:0,72,1338	0/0:31,0:31:93.32:0,93,1773	0/0:14,0:14:39.13:0,39,753	0/0:21,0:21:60.21:0,60,1149	0/0:29,0:29:87.30:0,87,1661	0/0:18,0:18:54.17:0,54,1010	0/0:19,0:19:54.19:0,54,1043	1/1:2,23:25:60.20:919,60,0	1/1:1,29:29:72.24:1103,72,0	0/0:15,0:15:45.15:0,45,862	0/0:33,0:33:99:0,99,1868	0/0:26,0:26:78.27:0,78,1496	0/0:16,0:16:36.12:0,36,683
chr10	40154222	.	T	TTTG	1621.72	PASS	AB=0.964;AC=20;AF=0.357;AN=56;BaseQRankSum=-2.879;DP=508;FS=18.864;HRun=0;HaplotypeScore=83.5542;InbreedingCoeff=0.6765;MQ=38.87;MQ0=44;MQRankSum=-1.949;QD=8.27;ReadPosRankSum=-2.750;VQSLOD=0.9116;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:24:18.15:0,18,247	0/0:7,0:7:11.97:0,12,116	1/1:11,0:1:2.60:10,3,0	0/1:8,0:2:0:1,0,0	0/0:29,0:29:72.32:0,72,619	0/0:17,0:15:38.35:0,38,263	0/0:16,0:18:11.09:0,11,183	1/1:3,1:26:62.38:447,62,0	0/0:20,0:18:15.54:0,16,192	0/0:15,0:12:35.78:0,36,296	0/0:16,0:14:32.13:0,32,214	0/0:23,0:23:25.09:0,25,233	0/1:13,0:13:22.29:22,0,118	0/1:14,0:14:57.86:58,0,148	0/0:16,0:14:32:0,32,228	0/0:12,0:10:26.91:0,27,237	0/0:25,0:19:35.25:0,35,278	0/0:32,0:29:61.16:0,61,488	1/1:23,0:21:36.59:337,37,0	1/1:4,0:17:17.12:104,17,0	1/1:9,0:8:18.21:116,18,0	0/0:17,0:16:41.18:0,41,303	0/0:17,0:16:1.95:0,2,164	0/0:16,0:13:22.63:0,23,166	1/1:4,12:22:9.44:103,9,0	1/1:19,1:18:42.24:278,42,0	1/1:18,0:21:41.15:298,41,0	0/1:5,0:5:5.85:44,0,6
chr10	40156059	.	C	CAAA	551.21	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=3.113;DP=489;FS=0.947;HRun=12;HaplotypeScore=75.5989;InbreedingCoeff=0.9159;MQ=76.36;MQ0=0;MQRankSum=-2.023;QD=13.12;ReadPosRankSum=-2.559;VQSLOD=0.9067;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,5:13:15.03:231,15,0	0/0:5,0:5:8.96:0,9,101	0/0:13,0:12:17.79:0,18,179	0/0:10,0:11:11.80:0,12,110	0/0:19,0:22:43.52:0,44,506	0/0:22,0:22:54.02:0,54,597	0/0:19,0:20:51.01:0,51,555	0/0:27,0:27:60.02:0,60,653	0/0:11,0:11:17.75:0,18,202	0/0:26,0:26:41.88:0,42,467	0/0:27,0:27:57.05:0,57,625	0/0:14,0:14:32.97:0,33,370	1/1:4,12:18:18.06:315,18,0	1/1:3,7:11:12.01:141,12,0	0/0:15,0:15:39.07:0,39,437	0/0:17,0:17:35.90:0,36,403	0/0:15,0:15:26.94:0,27,292	0/0:25,0:27:50.94:0,51,554	0/0:16,0:16:33.02:0,33,370	0/0:28,0:29:71.93:0,72,774	0/0:16,0:16:32.30:0,32,368	0/0:18,0:18:20.11:0,20,446	0/0:15,0:17:37.48:0,37,417	0/0:6,0:6:12.02:0,12,134	0/0:19,0:19:48.01:0,48,538	0/0:21,0:21:48.02:0,48,537	0/0:24,0:28:53.85:0,54,607	0/0:4,0:5:10.52:0,11,132
chr10	40156510	.	CTT	C	3592.66	PASS	AB=0.564;AC=21;AF=0.375;AN=56;BaseQRankSum=-8.172;DP=580;FS=0.799;HRun=15;HaplotypeScore=95.3856;InbreedingCoeff=0.8572;MQ=77.59;MQ0=2;MQRankSum=-0.982;QD=16.11;ReadPosRankSum=2.977;VQSLOD=3.0888;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,19:25:44.48:425,44,0	0/0:3,0:11:24.03:0,24,236	0/0:33,1:20:12.76:0,13,324	0/0:26,0:19:0.09:0,0,123	0/0:8,0:23:52.86:0,53,516	0/0:3,0:14:27.02:0,27,259	0/0:6,1:24:9.12:0,9,291	1/1:10,11:24:44.02:346,44,0	0/0:7,0:18:33.05:0,33,337	0/0:12,0:26:54.02:0,54,528	0/0:10,0:16:30.04:0,30,306	0/0:5,0:26:40.32:0,40,371	1/1:11,12:24:49.87:392,50,0	1/1:9,19:29:41.52:355,42,0	0/0:2,0:26:39.05:0,39,375	0/0:5,0:20:39:0,39,357	0/0:1,0:14:30.04:0,30,285	0/0:2,0:13:18.03:0,18,181	1/1:5,13:20:35.51:345,36,0	1/1:2,12:16:20.68:273,21,0	1/1:1,11:15:26.33:253,26,0	0/0:6,0:26:59.99:0,60,578	0/0:4,0:20:38.20:0,38,367	0/0:3,0:16:33.04:0,33,314	1/1:4,16:22:44.41:367,44,0	0/1:5,14:22:17.77:335,0,18	1/1:2,15:19:50.45:420,50,0	1/1:2,3:7:5.58:82,6,0
chr10	40156692	.	T	TTGTGTGTGTGTGTGTGTGTG	10294	PASS	AB=0.983;AC=48;AF=0.923;AN=52;BaseQRankSum=-4.085;DP=546;FS=0.000;HRun=0;HaplotypeScore=269.6781;InbreedingCoeff=0.0708;MQ=57.51;MQ0=3;MQRankSum=2.527;QD=20.38;ReadPosRankSum=1.085;VQSLOD=3.1502;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:29:19.32:81,0,19	./.	1/1:23,0:13:0.47:1,0,0	./.	1/1:21,0:21:6.05:371,6,0	1/1:13,0:12:3.01:50,3,0	1/1:20,0:19:15:510,15,0	1/1:28,0:28:25.67:603,26,0	1/1:22,0:20:8.33:637,8,0	1/1:19,0:19:21.99:965,22,0	1/1:12,0:11:0.47:1,0,0	0/1:20,0:18:5.71:308,0,6	1/1:15,0:15:12.03:609,12,0	1/1:21,0:21:5.76:363,6,0	1/1:21,0:25:9.03:518,9,0	1/1:20,3:24:6.49:556,6,0	1/1:21,4:25:12.04:793,12,0	0/1:13,0:14:59.45:828,0,59	1/1:15,0:15:6.49:81,6,0	1/1:12,0:11:3.01:53,3,0	1/1:29,0:28:6.39:213,6,0	1/1:10,0:10:3.46:24,3,0	0/1:17,0:17:0.28:0,0,0	1/1:38,0:37:13.33:440,13,0	1/1:18,0:17:12.02:257,12,0	1/1:18,0:18:27.09:1423,27,0	1/1:7,0:7:9.03:342,9,0	1/1:7,0:7:3.01:266,3,0
chr10	40157169	.	AGCGCGC	A	7568.17	PASS	AB=0.816;AC=40;AF=0.714;AN=56;BaseQRankSum=-3.065;DP=513;FS=38.243;HRun=0;HaplotypeScore=152.7900;InbreedingCoeff=0.1031;MQ=67.24;MQ0=5;MQRankSum=-3.561;QD=16.38;ReadPosRankSum=2.976;VQSLOD=2.3215;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:31,0:31:21.05:256,21,0	1/1:2,8:10:11.95:197,12,0	0/0:10,0:9:4.40:0,4,39	0/0:9,0:9:13.73:0,14,96	0/1:12,0:13:14.57:366,0,15	0/1:11,3:14:72.29:217,0,72	0/1:23,5:28:54.94:640,0,55	1/1:6,16:22:48.10:911,48,0	0/1:7,1:21:64.99:65,0,92	1/1:4,10:16:26.22:606,26,0	1/1:6,2:18:5.85:51,6,0	1/1:0,20:20:15.01:325,15,0	1/1:16,0:16:12.04:141,12,0	1/1:20,0:20:18:213,18,0	0/1:22,0:25:51.67:409,0,52	0/1:8,0:10:38.74:226,0,39	0/1:26,0:29:57.67:718,0,58	1/1:8,18:26:14.72:247,15,0	1/1:7,0:7:12.04:246,12,0	1/1:15,0:15:15.05:251,15,0	0/1:6,20:24:0:0,0,0	0/1:15,0:17:39.56:272,0,40	0/1:7,0:8:0:0,0,0	0/0:3,28:32:0.19:0,0,1	1/1:23,0:23:18.06:322,18,0	1/1:18,0:18:24.55:462,25,0	1/1:21,0:20:9.83:263,10,0	1/1:5,0:4:9.03:162,9,0
chr10	40157174	.	GCGCGCGCACACACACA	G	8837.04	PASS	AB=1.000;AC=33;AF=0.589;AN=56;BaseQRankSum=-5.810;DP=505;FS=31.786;HRun=0;HaplotypeScore=198.5789;InbreedingCoeff=0.0727;MQ=65.48;MQ0=7;MQRankSum=-3.017;QD=21.40;ReadPosRankSum=0.092;VQSLOD=2.5592;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:32,0:32:21.07:745,21,0	0/0:11,0:10:15.03:0,15,424	0/0:8,0:7:4.16:0,4,39	0/0:8,0:8:13.73:0,14,96	0/1:13,0:13:99:201,0,823	0/1:14,0:14:99:165,0,721	0/1:30,0:30:99:224,0,1520	1/1:18,0:18:48.10:911,48,0	0/1:20,0:20:40.58:41,0,943	0/1:16,0:16:99:255,0,801	0/1:18,0:18:30.61:31,0,382	0/1:22,0:22:32.70:33,0,447	1/1:14,0:14:12.04:420,12,0	1/1:19,0:19:18.53:623,19,0	0/1:25,0:24:99:198,0,1383	0/1:10,0:10:99:143,0,732	0/1:29,0:29:99:625,0,1203	0/0:25,0:23:17.99:0,18,578	1/1:0,5:5:15.03:359,15,0	1/1:2,14:16:15.05:696,15,0	1/1:26,0:23:0.47:1,0,0	0/1:16,0:16:99:265,0,556	0/0:2,0:8:2.70:0,3,125	0/0:31,0:32:4.03:0,4,87	1/1:1,23:25:18.06:837,18,0	1/1:4,15:19:30.52:864,31,0	1/1:4,18:21:16.97:791,17,0	1/1:1,2:3:9.03:410,9,0
chr10	40157176	.	GCGCGCACACACACACACACA	G	5742.20	PASS	AB=1.000;AC=32;AF=0.571;AN=56;BaseQRankSum=-2.122;DP=497;FS=20.354;HRun=0;HaplotypeScore=222.9479;InbreedingCoeff=-0.1721;MQ=61.55;MQ0=7;MQRankSum=-4.120;QD=13.77;ReadPosRankSum=-0.518;VQSLOD=1.6794;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,29:31:21.07:1162,21,0	0/0:11,0:10:15.05:0,15,787	1/1:5,0:4:2.74:12,3,0	0/0:6,0:6:2.50:0,2,9	0/1:14,0:14:99:102,0,1570	0/1:15,0:15:96.89:97,0,1081	0/1:29,0:29:83.11:83,0,2623	0/1:18,0:18:63.05:505,0,63	0/1:19,0:19:20.67:21,0,1447	0/1:17,0:17:99:106,0,1692	0/1:19,0:19:9.09:9,0,824	0/1:25,0:25:12.49:12,0,1083	1/1:0,13:14:12.04:659,12,0	1/1:1,18:19:18.06:999,18,0	0/1:24,0:23:44.15:44,0,2331	0/1:10,0:10:77.64:78,0,1189	0/1:28,0:28:99:244,0,2078	0/0:24,0:22:18.06:0,18,1028	0/1:5,0:5:36.82:160,0,37	1/1:15,0:16:15.05:278,15,0	1/1:26,0:23:0.47:1,0,0	0/1:18,0:18:99:110,0,1114	0/0:8,0:8:2.02:0,2,202	0/0:31,0:31:4.16:0,4,164	1/1:24,0:25:18.06:356,18,0	0/1:15,0:15:99:260,0,164	1/1:21,0:20:0.72:249,1,0	1/1:4,0:3:9.03:197,9,0
chr10	40157809	.	G	GGA	2288.67	PASS	AB=0.900;AC=24;AF=0.462;AN=52;BaseQRankSum=0.596;DP=522;FS=2.435;HRun=0;HaplotypeScore=108.8525;InbreedingCoeff=-0.3689;MQ=66.04;MQ0=15;MQRankSum=-0.875;QD=6.12;ReadPosRankSum=-5.591;VQSLOD=1.5554;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	./.	0/1:4,2:6:6.26:92,0,6	0/0:34,0:16:11.98:0,12,112	0/0:33,0:14:14.99:0,15,142	0/1:21,0:19:24.09:24,0,34	0/1:10,0:9:0:0,0,0	0/1:18,0:18:24.06:33,0,24	0/1:32,1:32:11.60:173,0,12	0/1:13,0:12:18.14:63,0,18	0/1:22,1:22:90.44:115,0,90	0/0:8,0:8:3.33:0,3,19	0/1:14,15:29:99:294,0,105	0/0:14,0:14:5.51:0,6,28	./.	0/0:18,0:18:5.84:0,6,35	0/1:10,0:10:48.02:48,0,50	0/1:20,0:19:54.15:88,0,54	0/1:13,0:13:22.71:57,0,23	0/1:12,0:13:13.33:135,0,13	0/1:7,2:21:7.01:42,0,7	0/1:27,0:27:47.12:179,0,47	0/1:19,0:19:44.10:132,0,44	1/1:6,2:8:6.02:93,6,0	0/1:13,16:29:48.21:208,0,48	0/1:8,0:12:29.11:29,0,36	0/1:21,0:22:3.66:204,0,4	1/1:15,1:15:5.94:157,6,0	1/1:7,0:7:21.05:273,21,0
chr10	40157818	.	GAGAGAGAGAGAGAGAGACAGACAGACAGACAGAC	G	451.32	PASS	AC=2;AF=0.038;AN=52;BaseQRankSum=3.017;DP=529;FS=0.000;HRun=0;HaplotypeScore=309.0559;InbreedingCoeff=0.6562;MQ=58.33;MQ0=19;MQRankSum=-2.555;QD=34.72;ReadPosRankSum=-2.268;VQSLOD=1.5450;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:7,0:7:21.07:0,21,1603	0/0:30,0:12:18.53:0,19,762	0/0:30,0:11:21.07:0,21,634	0/0:22,0:20:28.67:0,29,2007	0/0:10,0:9:6.48:0,6,100	0/0:16,0:15:12.01:0,12,805	0/0:38,0:36:99:0,105,5749	0/0:15,0:14:13.26:0,13,1528	0/0:27,0:24:69.23:0,69,5902	0/0:7,0:7:8.71:0,9,348	0/0:26,0:25:42.11:0,42,4790	1/1:0,13:13:5.18:530,5,0	./.	0/0:17,0:17:13.60:0,14,556	0/0:11,0:11:33.11:0,33,2707	0/0:23,0:22:41.88:0,42,3392	0/0:14,0:14:24.08:0,24,1580	0/0:13,0:13:33.11:0,33,3086	0/0:23,0:23:18.53:0,19,1871	0/0:26,0:25:54.16:0,54,3776	0/0:19,0:19:30.10:0,30,3644	0/0:10,0:10:24.54:0,25,2258	0/0:28,0:27:45.15:0,45,3677	0/0:12,0:12:21.03:0,21,1865	0/0:23,0:23:66.23:0,66,7425	0/0:17,0:15:33.08:0,33,2789	0/0:7,0:7:21.07:0,21,2607
chr10	40157828	.	G	GAC	523.34	PASS	AB=0.982;AC=13;AF=0.250;AN=52;BaseQRankSum=5.805;DP=528;FS=15.519;HRun=0;HaplotypeScore=99.4955;InbreedingCoeff=-0.3430;MQ=53.64;MQ0=18;MQRankSum=1.403;QD=2.46;ReadPosRankSum=5.993;VQSLOD=0.0143;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/1:6,0:6:26.30:76,0,26	0/0:25,0:8:18.03:0,18,226	0/0:26,0:8:15.01:0,15,191	0/0:20,0:18:8.01:0,8,152	0/1:12,0:11:18.96:19,0,19	0/1:15,0:14:14.89:15,0,19	0/0:44,0:42:99:0,102,822	0/1:13,0:12:12.74:47,0,13	0/1:18,8:23:99:143,0,368	0/0:13,0:13:9.47:0,9,92	0/1:24,0:23:99:113,0,190	0/0:13,0:13:5.68:0,6,28	./.	0/0:15,0:16:12.01:0,12,131	0/1:13,0:13:12.87:13,0,272	0/0:22,0:21:18.88:0,19,268	0/1:19,0:19:6.96:7,0,110	0/0:12,0:12:11.57:0,12,218	0/0:27,0:27:20.36:0,20,185	0/1:23,0:22:31.08:31,0,254	0/1:17,0:17:16:16,0,170	0/1:10,0:10:22.44:22,0,97	0/1:25,0:24:73.51:74,0,175	0/0:13,0:13:4.39:0,4,178	0/0:23,0:23:38.94:0,39,475	0/0:17,0:15:12.45:0,12,170	0/1:10,0:10:22.47:92,0,22
chr10	40157832	.	G	GAGAGAC	2094.65	PASS	AB=0.887;AC=19;AF=0.365;AN=52;BaseQRankSum=1.306;DP=520;FS=0.000;HRun=0;HaplotypeScore=116.2051;InbreedingCoeff=-0.4219;MQ=53.31;MQ0=15;MQRankSum=0.168;QD=6.27;ReadPosRankSum=3.254;VQSLOD=1.9659;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/1:4,0:5:3.13:169,0,3	0/0:17,0:7:11.98:0,12,113	0/0:21,0:7:14.99:0,15,142	0/0:12,1:20:0.84:0,1,53	1/1:3,0:13:0.47:1,0,0	0/1:2,0:15:5.89:33,0,6	0/1:43,0:41:59.61:60,0,94	0/1:3,0:12:0.29:151,0,0	0/1:25,0:22:81.28:280,0,81	0/0:2,0:17:3.41:0,3,19	0/0:24,0:23:17.32:0,17,280	0/0:13,0:13:5.85:0,6,84	./.	0/0:6,6:17:6.31:0,6,36	0/1:12,0:12:43.38:171,0,43	0/1:11,0:21:57.22:135,0,57	0/1:6,11:20:39.81:117,0,40	0/1:11,0:11:51.98:57,0,52	0/1:25,0:25:35.85:36,0,94	0/1:23,0:22:99:165,0,134	0/1:15,0:17:43.34:277,0,43	0/0:9,0:9:11.63:0,12,95	0/1:24,0:23:32.25:32,0,80	0/1:12,0:12:19.78:20,0,102	0/1:23,0:23:99:127,0,270	0/1:19,0:17:74.63:75,0,98	0/1:10,0:10:35.81:332,0,36
chr10	40157834	.	GAC	G	281.51	PASS	AB=0.943;AC=13;AF=0.250;AN=52;BaseQRankSum=-0.112;DP=508;FS=8.630;HRun=0;HaplotypeScore=99.8415;InbreedingCoeff=-0.1784;MQ=51.94;MQ0=15;MQRankSum=-1.648;QD=1.27;ReadPosRankSum=-1.584;VQSLOD=0.6518;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/1:6,0:6:47.76:48,0,57	0/0:17,0:7:6.95:0,7,105	0/0:20,1:5:14.99:0,15,142	0/0:22,1:21:19.97:0,20,164	0/0:12,0:11:0.47:0,0,1	0/0:14,0:13:2.56:0,3,54	0/1:42,1:41:44.87:45,0,196	0/1:14,0:13:22.04:22,0,110	0/1:25,1:23:0.77:1,0,449	0/0:16,0:16:2.78:0,3,17	0/0:24,1:24:41.97:0,42,452	1/1:13,0:13:5.68:28,6,0	./.	0/0:16,0:16:8.84:0,9,60	0/0:12,0:12:5.76:0,6,206	0/0:21,0:20:26.78:0,27,236	0/1:18,0:18:31.56:32,0,50	0/0:9,1:10:13.90:0,14,162	0/0:25,0:25:21.82:0,22,190	0/1:19,3:21:99:104,0,203	0/1:15,2:17:14.98:15,0,193	0/0:7,1:8:17.98:0,18,148	0/1:22,0:21:18.67:19,0,168	0/1:11,1:12:19.80:20,0,107	0/0:23,0:23:25.86:0,26,514	0/1:16,2:16:38.01:38,0,162	0/1:8,2:10:52.14:52,0,163
chr10	40161405	.	AT	A	10216.37	PASS	AB=0.556;AC=45;AF=0.804;AN=56;BaseQRankSum=6.889;DP=555;FS=0.510;HRun=9;HaplotypeScore=67.1645;InbreedingCoeff=0.8577;MQ=68.54;MQ0=7;MQRankSum=-0.165;QD=22.40;ReadPosRankSum=3.721;VQSLOD=5.6324;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:69.20:0,69,792	1/1:0,5:5:15.01:137,15,0	0/0:23,0:15:11.82:0,12,186	0/0:22,0:11:17.98:0,18,178	1/1:2,24:26:72.04:657,72,0	1/1:4,16:19:45.02:412,45,0	1/1:1,17:18:4.40:295,4,0	1/1:4,26:30:75.02:682,75,0	1/1:0,14:14:42.02:384,42,0	1/1:7,24:31:75.02:681,75,0	1/1:2,15:17:39.02:356,39,0	1/1:1,6:7:9:82,9,0	0/0:10,1:11:5.63:0,6,319	0/0:14,0:14:39.09:0,39,427	1/1:1,17:18:48.03:439,48,0	1/1:2,12:14:33.02:302,33,0	1/1:3,26:29:66.03:604,66,0	1/1:0,19:19:48.03:439,48,0	1/1:2,20:21:57.02:521,57,0	1/1:5,21:26:57.02:520,57,0	1/1:3,15:18:39.02:357,39,0	1/1:2,11:13:30.01:274,30,0	0/1:2,8:10:0.42:168,0,0	1/1:0,22:22:60.03:549,60,0	1/1:5,23:28:65.63:604,66,0	1/1:0,23:23:69.02:625,69,0	1/1:0,25:25:68.92:631,69,0	1/1:0,21:21:54.03:494,54,0
chr10	40162092	.	A	ATG	4839.51	PASS	AB=0.876;AC=19;AF=0.339;AN=56;BaseQRankSum=12.418;DP=725;FS=20.700;HRun=0;HaplotypeScore=128.4271;InbreedingCoeff=0.2983;MQ=63.97;MQ0=8;MQRankSum=1.028;QD=13.22;ReadPosRankSum=6.805;VQSLOD=2.6396;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:45,0:45:14.96:15,0,289	0/0:2,0:2:3.01:0,3,45	0/0:43,0:26:34.24:0,34,868	0/0:53,0:34:83.30:0,83,928	0/0:28,0:28:84.28:0,84,1320	0/0:17,0:17:7.53:0,8,173	0/1:26,0:26:11.27:11,0,213	1/1:16,12:28:34.05:699,34,0	0/0:22,0:20:12.64:0,13,306	0/0:35,0:35:99:0,99,1583	0/0:14,0:14:42.11:0,42,650	0/0:22,0:21:17.25:0,17,354	0/1:25,0:25:17.22:17,0,301	0/1:21,0:21:0.66:1,0,204	0/0:25,0:25:72.25:0,72,1146	0/0:19,0:17:53.55:0,54,821	0/0:44,0:42:99:0,123,1887	0/0:22,0:22:63.21:0,63,977	1/1:10,6:16:19.36:316,19,0	1/1:6,19:25:12.35:713,12,0	1/1:5,33:39:64.59:1277,65,0	0/0:13,0:13:39.12:0,39,595	0/1:18,0:18:5.06:5,0,98	0/1:36,0:36:12.60:13,0,328	0/1:5,21:27:16.99:578,0,17	0/1:13,10:22:99:449,0,107	0/1:10,14:24:16.14:459,0,16	1/1:3,8:13:16.95:287,17,0
chr10	40162094	.	G	GCA	11463.96	PASS	AB=0.832;AC=27;AF=0.482;AN=56;BaseQRankSum=1.415;DP=732;FS=5.213;HRun=0;HaplotypeScore=108.7520;InbreedingCoeff=0.5397;MQ=63.09;MQ0=8;MQRankSum=0.507;QD=26.29;ReadPosRankSum=3.525;VQSLOD=6.2392;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:12,35:47:50.90:1319,51,0	0/0:3,0:3:2.99:0,3,23	0/0:40,0:26:29.59:0,30,463	0/0:49,0:29:39.07:0,39,418	0/0:27,0:29:71.88:0,72,828	0/1:4,13:17:6.30:406,0,6	1/1:8,20:28:51.17:823,51,0	1/1:32,0:32:23.77:810,24,0	0/1:7,12:17:2.93:451,0,3	0/0:32,0:35:77.90:0,78,901	0/0:13,0:14:38.95:0,39,450	0/1:10,12:21:6.29:406,0,6	1/1:10,15:25:45.15:715,45,0	1/1:6,14:21:33.10:510,33,0	0/0:23,0:25:62.86:0,63,718	0/0:16,0:17:30.91:0,31,506	0/0:41,0:41:99:0,105,1222	0/0:23,0:23:48.60:0,49,568	1/1:18,0:18:24.08:380,24,0	0/1:26,0:26:6.07:739,0,6	1/1:40,0:40:54.06:1311,54,0	0/0:13,0:13:30.05:0,30,347	1/1:4,14:19:33.11:533,33,0	1/1:8,27:35:44.88:1220,45,0	0/1:27,0:27:27.63:581,0,28	0/1:23,0:22:99:506,0,128	0/1:24,0:24:67.37:465,0,67	1/1:13,0:13:18.06:289,18,0
chr10	40162383	.	CT	C	4293.99	PASS	AB=0.568;AC=44;AF=0.786;AN=56;BaseQRankSum=-5.510;DP=468;FS=9.661;HRun=14;HaplotypeScore=56.7321;InbreedingCoeff=0.6109;MQ=78.54;MQ0=1;MQRankSum=-1.487;QD=11.54;ReadPosRankSum=2.491;VQSLOD=4.2339;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:31:39.95:0,40,209	1/1:5,1:6:2.91:20,3,0	0/0:24,0:19:6.06:0,6,142	0/0:14,0:9:1.91:0,2,41	1/1:9,17:27:37.47:252,37,0	1/1:4,21:27:20.83:272,21,0	0/1:4,17:21:8.05:240,0,8	1/1:7,15:23:18.72:260,19,0	1/1:1,10:14:29.92:182,30,0	1/1:3,13:17:40.70:273,41,0	1/1:5,2:8:10.48:65,10,0	0/1:4,9:14:5:106,0,5	0/0:6,1:16:5.39:0,5,110	0/0:3,0:8:13.34:0,13,76	1/1:6,12:19:9.88:204,10,0	1/1:4,7:11:20.77:144,21,0	1/1:3,18:22:49.60:332,50,0	1/1:2,12:15:28.78:191,29,0	1/1:5,10:15:29.19:191,29,0	1/1:3,14:17:10.69:214,11,0	1/1:5,8:14:0.32:107,0,0	1/1:5,8:14:19.77:129,20,0	1/1:1,13:14:17.84:123,18,0	1/1:1,11:14:14.10:148,14,0	1/1:3,16:19:29.73:205,30,0	1/1:2,13:15:35.56:240,36,0	1/1:2,12:14:32.72:226,33,0	1/1:2,9:12:25.81:170,26,0
chr10	40162831	.	AACACACACACAC	A	1886.23	PASS	AB=0.846;AC=15;AF=0.288;AN=52;BaseQRankSum=0.528;DP=552;FS=10.309;HRun=0;HaplotypeScore=174.7464;InbreedingCoeff=0.7310;MQ=59.50;MQ0=13;MQRankSum=0.425;QD=10.84;ReadPosRankSum=-0.863;VQSLOD=1.2116;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:34:30.39:0,30,440	0/0:5,0:5:6.02:0,6,260	./.	./.	0/0:16,0:16:9.26:0,9,354	0/0:17,0:29:14.97:0,15,342	0/0:29,0:27:24.47:0,24,671	1/1:17,0:16:2.70:20,3,0	0/0:15,0:15:18.02:0,18,655	0/0:12,0:12:15.04:0,15,525	0/0:14,0:14:9.02:0,9,254	0/0:17,0:16:36.12:0,36,1373	0/0:6,0:9:3.01:0,3,36	0/0:11,0:21:10.43:0,10,178	0/0:9,0:15:2.77:0,3,155	0/0:13,0:13:9.03:0,9,464	0/0:16,0:25:9.92:0,10,406	0/0:13,0:12:27.56:0,28,1119	0/1:18,4:20:2.07:234,0,2	1/1:9,12:21:23.35:307,23,0	1/1:51,0:47:24.67:424,25,0	0/0:10,0:17:11.89:0,12,248	0/0:9,0:9:15.05:0,15,544	0/0:24,0:24:45.15:0,45,2099	1/1:5,11:17:12.04:355,12,0	1/1:18,8:26:26.34:297,26,0	1/1:5,7:12:11.40:319,11,0	1/1:6,2:7:3.01:104,3,0
chr10	40164579	.	CAGAGAGAG	C	2581	PASS	AB=0.770;AC=21;AF=0.389;AN=54;BaseQRankSum=7.990;DP=530;FS=4.249;HRun=0;HaplotypeScore=138.8473;InbreedingCoeff=0.3846;MQ=61.22;MQ0=19;MQRankSum=-8.798;QD=10.00;ReadPosRankSum=1.622;VQSLOD=2.3086;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:6.02:0,6,202	0/1:4,0:8:13.25:13,0,83	./.	0/1:46,0:16:0:0,0,0	1/1:14,0:27:0.89:217,1,0	1/1:9,9:19:29.07:677,29,0	1/1:10,5:17:20.99:400,21,0	0/0:32,0:32:33.10:0,33,942	1/1:3,6:9:18.02:399,18,0	0/1:11,0:11:5.63:6,0,40	0/0:16,0:21:8.17:0,8,217	1/1:9,3:13:9.03:207,9,0	0/0:3,0:10:9.03:0,9,315	0/0:11,0:13:15.05:0,15,531	0/1:11,0:23:87.46:87,0,133	0/1:7,4:16:47.78:264,0,48	0/1:12,1:14:89.50:90,0,117	0/0:8,0:15:10.92:0,11,201	0/0:13,0:13:3.01:0,3,93	0/0:19,0:19:30.09:0,30,980	0/0:17,0:17:27.05:0,27,819	0/1:12,1:18:50.07:131,0,50	1/1:14,2:16:6.02:151,6,0	1/1:10,7:17:8.96:116,9,0	0/0:14,0:14:27.09:0,27,914	0/0:19,0:19:33.10:0,33,1053	0/0:20,0:20:36.12:0,36,1324	0/0:20,0:21:45.07:0,45,1075
chr10	40164662	.	T	TGG	3610.99	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-9.983;DP=472;FS=20.862;HRun=7;HaplotypeScore=99.1856;InbreedingCoeff=0.9624;MQ=82.64;MQ0=0;MQRankSum=-3.654;QD=12.45;ReadPosRankSum=0.036;VQSLOD=0.0055;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,0:19:7.98:106,8,0	0/0:2,0:12:27.44:0,27,120	0/0:18,0:19:52.85:0,53,582	0/0:17,0:18:39.05:0,39,427	0/0:3,0:24:57.64:0,58,252	1/1:6,0:15:21.04:213,21,0	1/1:4,1:16:29.70:310,30,0	1/1:8,0:26:38.72:165,39,0	1/1:4,1:15:24.04:231,24,0	0/0:0,0:14:35.68:0,36,156	0/0:0,0:18:46.66:0,47,204	1/1:3,6:9:18.06:295,18,0	1/1:0,0:19:39.80:140,40,0	1/1:1,0:17:37.14:136,37,0	0/0:2,0:17:41.16:0,41,180	0/0:3,0:15:4.14:0,4,103	0/0:2,0:18:46.65:0,47,204	0/0:3,0:14:27.44:0,27,120	1/1:2,0:9:14.97:53,15,0	1/1:1,0:21:44.92:158,45,0	1/1:2,0:18:32.44:114,32,0	0/0:1,0:12:30.19:0,30,132	1/1:1,6:7:18.05:272,18,0	1/1:3,18:21:48.16:788,48,0	1/1:1,0:23:47.41:167,47,0	1/1:0,0:21:49.78:175,50,0	1/1:0,0:24:59.76:209,60,0	1/1:0,0:10:22.46:79,22,0
chr10	40164915	.	C	CT	1980.41	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=-7.712;DP=421;FS=0.519;HRun=5;HaplotypeScore=56.6100;InbreedingCoeff=0.5093;MQ=70.79;MQ0=3;MQRankSum=-0.349;QD=9.39;ReadPosRankSum=-1.463;VQSLOD=-0.1751;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:41.90:0,42,431	0/0:8,0:8:24.06:0,24,258	0/0:24,0:14:17.48:0,17,178	0/1:14,0:9:16.31:16,0,64	0/0:30,0:30:87.11:0,87,882	1/1:0,18:18:51.17:670,51,0	1/1:2,6:8:20.61:263,21,0	1/1:30,0:30:2.24:115,2,0	1/1:1,8:9:21.07:276,21,0	0/0:16,0:16:39.09:0,39,413	0/0:16,0:16:36.08:0,36,381	1/1:3,9:12:12.68:301,13,0	0/0:7,0:7:21.05:0,21,225	0/0:8,0:8:24.05:0,24,250	0/0:8,0:8:24.06:0,24,258	0/0:15,0:15:42.10:0,42,445	0/0:27,0:27:81.17:0,81,848	0/0:12,0:12:30.06:0,30,313	1/1:15,0:14:0.52:38,1,0	0/1:18,0:18:10.60:38,0,11	0/0:10,0:10:3.85:0,4,12	0/0:5,0:5:11.94:0,12,103	1/1:3,4:6:12.04:158,12,0	1/1:0,5:5:12.04:158,12,0	0/1:27,0:26:17.58:77,0,18	0/1:29,0:29:33.24:33,0,57	0/1:19,0:19:23.80:30,0,24	0/0:8,0:8:8.98:0,9,25
chr10	40165091	.	T	TAC	2323.61	PASS	AB=0.868;AC=34;AF=0.680;AN=50;BaseQRankSum=-0.408;DP=497;FS=0.788;HRun=0;HaplotypeScore=79.0742;InbreedingCoeff=0.4529;MQ=65.44;MQ0=2;MQRankSum=0.352;QD=6.72;ReadPosRankSum=0.439;VQSLOD=2.8887;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:26,3:29:36.42:372,36,0	0/0:8,0:8:6.01:0,6,64	./.	./.	0/1:11,0:11:20.40:90,0,20	0/0:6,0:14:17:0,17,82	0/0:12,0:21:14.20:0,14,70	1/1:21,0:20:4.63:28,5,0	0/0:27,0:28:32.72:0,33,305	0/1:13,0:13:0:0,0,0	0/0:12,0:12:11.97:0,12,116	1/1:5,9:14:3.01:44,3,0	1/1:11,2:13:8.76:100,9,0	1/1:5,3:10:3.01:44,3,0	0/1:17,10:27:14.36:204,0,14	1/1:15,13:28:10.55:424,11,0	1/1:17,18:36:26.34:363,26,0	0/0:9,0:9:6:0,6,58	1/1:16,0:16:2.69:60,3,0	1/1:6,0:6:6.02:76,6,0	1/1:22,1:35:12.01:119,12,0	1/1:2,2:4:2.94:44,3,0	./.	0/1:17,0:26:14.42:128,0,14	1/1:15,0:15:9.50:125,10,0	1/1:4,1:12:12.47:117,12,0	1/1:19,0:20:6.48:67,6,0	1/1:7,0:8:9:81,9,0
chr10	40165334	.	AG	A	1939.80	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.440;DP=512;FS=0.000;HRun=3;HaplotypeScore=49.2982;InbreedingCoeff=0.9961;MQ=65.86;MQ0=0;MQRankSum=-1.004;QD=31.29;ReadPosRankSum=1.885;VQSLOD=3.3370;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,24:24:63.20:781,63,0	0/0:14,0:14:39.13:0,39,560	0/0:10,0:10:24.06:0,24,314	0/0:13,0:13:36.10:0,36,475	0/0:15,0:15:42.14:0,42,602	0/0:18,0:18:48.16:0,48,691	0/0:19,0:19:57.15:0,57,796	0/0:26,0:26:66.21:0,66,918	0/0:19,0:19:54.16:0,54,756	0/0:13,0:13:39.12:0,39,546	0/0:24,0:24:69.22:0,69,974	0/0:12,0:12:36.11:0,36,501	1/1:0,17:17:45.14:558,45,0	1/1:1,20:21:60.19:744,60,0	0/0:27,0:27:78.26:0,78,1123	0/0:22,0:22:56.86:0,57,821	0/0:33,0:33:96.32:0,96,1383	0/0:17,0:17:45.15:0,45,648	0/0:22,0:22:63.19:0,63,888	0/0:15,0:15:45.15:0,45,647	0/0:18,0:18:54.18:0,54,778	0/0:7,0:7:21.05:0,21,266	0/0:11,0:11:33.11:0,33,475	0/0:12,0:12:36.12:0,36,518	0/0:17,0:17:51.17:0,51,735	0/0:31,0:31:87.27:0,87,1223	0/0:27,0:27:72.23:0,72,1010	0/0:8,0:8:21.07:0,21,302
chr10	40166340	.	C	CAA	15296	PASS	AB=0.978;AC=48;AF=0.857;AN=56;BaseQRankSum=-10.037;DP=603;FS=10.624;HRun=7;HaplotypeScore=89.8704;InbreedingCoeff=0.7987;MQ=84.46;MQ0=1;MQRankSum=-3.412;QD=28.81;ReadPosRankSum=0.325;VQSLOD=3.6230;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:60.19:0,60,407	1/1:0,7:8:21.07:341,21,0	0/1:46,0:32:3.28:3,0,256	0/1:20,0:17:4.29:4,0,109	1/1:3,23:27:72.16:1102,72,0	1/1:2,20:23:54.18:876,54,0	1/1:0,20:21:48.16:759,48,0	1/1:2,3:26:44.81:601,45,0	1/1:3,9:13:24.08:390,24,0	1/1:1,10:12:33.11:516,33,0	1/1:6,21:29:63.08:939,63,0	1/1:4,19:24:48.16:778,48,0	0/0:26,0:26:16.03:0,16,259	0/0:16,0:16:31.31:0,31,208	1/1:2,14:16:39.13:633,39,0	1/1:2,17:19:45.15:721,45,0	1/1:1,22:23:63.22:1023,63,0	1/1:1,8:9:21.07:341,21,0	1/1:1,2:18:41.29:525,41,0	1/1:2,0:21:41.57:471,42,0	1/1:0,0:17:21.06:250,21,0	1/1:2,19:21:54.14:838,54,0	1/1:7,31:38:87.25:1383,87,0	1/1:2,16:18:45.15:730,45,0	1/1:0,0:14:27:304,27,0	1/1:1,3:24:60.17:767,60,0	1/1:1,0:21:50.37:575,50,0	1/1:0,0:19:36.11:426,36,0
chr10	40166477	.	AC	A	120.46	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.710;DP=542;FS=1.710;HRun=1;HaplotypeScore=51.0237;InbreedingCoeff=0.9255;MQ=94.09;MQ0=0;MQRankSum=-1.082;QD=20.08;ReadPosRankSum=0.325;VQSLOD=3.7368;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:81.28:0,81,1294	0/0:7,0:7:21.06:0,21,305	0/0:18,0:18:54.15:0,54,800	0/0:31,0:31:93.31:0,93,1454	0/0:22,0:22:66.21:0,66,1031	0/0:23,0:23:69.24:0,69,1103	0/0:20,0:20:60.20:0,60,959	0/0:38,0:38:99:0,114,1821	0/0:17,0:17:48.16:0,48,767	0/0:25,0:25:72.25:0,72,1144	0/0:24,0:24:72.25:0,72,1151	0/0:26,0:26:78.27:0,78,1244	0/0:20,0:20:60.20:0,60,959	0/0:22,0:22:63.21:0,63,991	0/0:14,0:14:42.14:0,42,671	0/0:18,0:18:54.18:0,54,863	0/0:11,0:11:33.11:0,33,528	1/1:0,6:6:15.05:209,15,0	0/0:16,0:16:48.16:0,48,768	0/0:22,0:22:66.22:0,66,1045	0/0:23,0:23:63.21:0,63,1007	0/0:23,0:23:69.23:0,69,1091	0/0:16,0:16:48.15:0,48,736	0/0:15,0:15:45.11:0,45,691	0/0:16,0:16:48.16:0,48,760	0/0:18,0:18:54.17:0,54,841	0/0:21,0:21:63.20:0,63,968	0/0:3,0:3:9.03:0,9,144
chr10	40167523	.	CT	C	2022.69	PASS	AB=0.745;AC=27;AF=0.482;AN=56;BaseQRankSum=4.602;DP=574;FS=1.334;HRun=15;HaplotypeScore=87.0091;InbreedingCoeff=0.6160;MQ=71.01;MQ0=1;MQRankSum=-0.716;QD=6.55;ReadPosRankSum=4.089;VQSLOD=3.0650;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:35:49.60:0,50,302	0/0:7,0:7:11.77:0,12,81	0/0:37,0:16:14.36:0,14,117	0/0:23,1:15:9.56:0,10,57	0/0:23,2:26:15.08:0,15,346	1/1:6,12:20:30.62:185,31,0	1/1:5,10:16:19.74:121,20,0	0/1:19,5:26:47.11:80,0,47	1/1:5,15:20:5.65:165,6,0	0/0:16,1:18:28.16:0,28,346	0/0:19,0:19:26.98:0,27,232	1/1:7,13:22:39.31:242,39,0	0/0:5,0:18:20.19:0,20,118	0/0:6,0:17:29.14:0,29,189	0/1:15,2:18:17.94:18,0,126	0/1:13,3:17:15.52:16,0,229	0/0:24,2:28:10.62:0,11,372	0/0:15,1:16:22.66:0,23,307	1/1:9,10:21:21.28:172,21,0	1/1:6,10:20:15.18:174,15,0	1/1:7,6:13:11.45:76,11,0	0/0:16,0:19:44.79:0,45,373	0/1:7,11:17:6.13:94,0,6	1/1:13,10:27:21.81:231,22,0	1/1:5,16:23:45.03:280,45,0	1/1:9,10:21:27.43:165,27,0	1/1:9,9:21:28.97:165,29,0	0/1:2,3:5:12.27:50,0,12
chr10	40168440	.	AAGACAGAC	A	1183.57	PASS	AB=1.000;AC=22;AF=0.407;AN=54;BaseQRankSum=7.544;DP=575;FS=0.727;HRun=0;HaplotypeScore=176.3788;InbreedingCoeff=0.0933;MQ=70.86;MQ0=15;MQRankSum=-5.806;QD=3.70;ReadPosRankSum=-3.617;VQSLOD=1.8494;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:31:39.12:0,39,874	0/0:6,0:5:4.41:0,4,28	0/0:27,0:22:30.06:0,30,540	0/0:24,0:21:29.59:0,30,672	0/1:30,0:29:19.22:127,0,19	1/1:19,0:19:2.37:12,2,0	0/0:19,0:19:6.09:0,6,33	0/0:29,0:29:3.53:0,4,52	0/0:16,0:16:7.89:0,8,94	0/1:22,0:21:34.03:72,0,34	0/1:12,0:12:14.51:41,0,15	1/1:6,15:19:11.69:305,12,0	0/0:17,0:16:27.09:0,27,560	0/0:12,0:11:15.04:0,15,216	1/1:32,0:32:17.68:282,18,0	0/1:29,0:29:56.18:151,0,56	0/0:29,0:29:11.57:0,12,89	0/1:11,0:11:31.37:34,0,31	0/1:11,0:9:11.27:11,0,36	1/1:26,0:23:2.63:39,3,0	0/0:15,0:14:9.57:0,10,54	0/1:22,0:22:27.60:28,0,50	1/1:11,0:10:2.93:55,3,0	./.	0/1:13,0:13:0.17:54,0,0	0/1:25,0:24:8.67:9,0,29	0/1:32,0:32:16.14:83,0,16	1/1:4,0:3:3.01:47,3,0
chr10	40168452	.	CAGACAG	C	877.39	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=7.560;DP=572;FS=5.441;HRun=0;HaplotypeScore=160.2616;InbreedingCoeff=0.0494;MQ=60.93;MQ0=24;MQRankSum=-4.440;QD=2.52;ReadPosRankSum=-0.319;VQSLOD=1.9092;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:29:30.34:0,30,782	0/0:6,0:5:4.41:0,4,28	0/0:19,0:14:30.06:0,30,540	0/0:21,0:18:29.59:0,30,673	0/1:36,0:35:19.22:85,0,19	1/1:19,0:16:2.79:44,3,0	0/0:18,0:17:6.56:0,7,34	0/0:16,0:15:3.19:0,3,51	0/1:15,0:15:30.63:31,0,62	0/1:27,0:25:38.09:38,0,64	0/1:13,0:13:14.64:27,0,15	1/1:22,0:20:14.37:219,14,0	0/1:23,0:22:26.24:26,0,487	0/1:15,0:14:25.88:26,0,195	1/1:39,0:39:17.70:198,18,0	0/1:25,0:25:56.21:95,0,56	0/0:28,0:28:13.38:0,13,94	0/1:12,0:11:31.31:31,0,44	0/0:11,0:8:1.88:0,2,39	1/1:23,0:19:5.81:56,6,0	0/0:16,0:14:9.57:0,10,54	0/1:26,0:25:2.80:3,0,53	1/1:3,8:10:2.93:45,3,0	0/0:33,0:31:0.47:0,0,1	0/1:11,0:9:0.17:27,0,0	0/0:25,0:24:11.77:0,12,60	0/1:27,0:27:15.88:56,0,16	1/1:4,0:3:3.01:33,3,0
chr10	40168454	.	GACAGACACACACACACACAC	G	6253.46	PASS	AB=0.906;AC=26;AF=0.464;AN=56;BaseQRankSum=-3.302;DP=570;FS=20.037;HRun=0;HaplotypeScore=237.2139;InbreedingCoeff=0.1755;MQ=58.66;MQ0=26;MQRankSum=0.367;QD=16.90;ReadPosRankSum=1.886;VQSLOD=2.1678;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:29:41.77:0,42,1483	1/1:6,0:5:11.99:166,12,0	0/0:18,0:13:20.10:0,20,196	0/0:19,0:16:16.01:0,16,292	1/1:8,26:34:12.51:519,13,0	0/1:22,0:19:99:127,0,503	0/1:18,0:17:50.49:185,0,50	0/1:17,0:16:39.12:256,0,39	0/1:15,0:15:57.97:58,0,593	1/1:7,18:23:59.59:969,60,0	1/1:1,12:13:5.55:204,6,0	0/0:22,0:20:16.30:0,16,536	0/0:24,0:23:44.90:0,45,1743	0/0:14,0:14:17.88:0,18,437	1/1:0,38:39:17.48:984,17,0	1/1:20,4:24:28.28:1249,28,0	1/1:28,0:28:28.09:526,28,0	1/1:11,0:10:20.78:157,21,0	0/1:10,0:7:32.93:33,0,62	0/0:6,0:18:6.02:0,6,161	0/1:18,0:15:48.85:49,0,241	0/1:4,21:25:9.97:250,0,10	0/0:11,0:10:3.01:0,3,86	0/0:33,0:31:0:0,0,0	0/1:11,0:9:71.01:71,0,119	0/1:24,0:23:99:410,0,341	0/1:2,0:28:39.33:39,0,136	0/0:1,0:3:3.01:0,3,51
chr10	40168456	.	CAG	C	4187.75	PASS	AB=1.000;AC=44;AF=0.786;AN=56;BaseQRankSum=1.190;DP=572;FS=22.592;HRun=0;HaplotypeScore=124.6431;InbreedingCoeff=0.3057;MQ=56.12;MQ0=26;MQRankSum=-0.375;QD=8.31;ReadPosRankSum=3.525;VQSLOD=1.5226;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:31:27.20:0,27,341	1/1:5,0:4:11.98:97,12,0	0/0:15,0:10:20.10:0,20,196	0/0:19,0:16:21.94:0,22,301	1/1:35,0:34:14.87:107,15,0	1/1:22,0:19:41.94:356,42,0	1/1:19,0:18:10.57:291,11,0	1/1:16,0:15:35.81:298,36,0	1/1:16,0:16:35.80:316,36,0	1/1:26,0:24:49.22:372,49,0	1/1:13,0:13:5.98:46,6,0	1/1:22,0:20:13.28:67,13,0	0/1:23,0:22:26.98:27,0,204	0/1:15,0:14:28.97:29,0,76	1/1:39,0:39:17.79:136,18,0	1/1:21,0:21:59.71:466,60,0	1/1:28,1:29:25.50:327,26,0	1/1:11,0:10:7.92:141,8,0	1/1:4,5:6:10.87:72,11,0	1/1:22,0:18:5.79:37,6,0	0/1:18,0:15:5.92:143,0,6	0/1:26,0:25:10.18:23,0,10	1/1:11,0:10:2.99:24,3,0	0/1:36,0:34:7.04:7,0,39	1/1:12,0:10:23.90:186,24,0	1/1:26,0:25:67.43:546,67,0	0/1:28,0:28:19.80:48,0,20	1/1:4,0:3:2.99:24,3,0
chr10	40169335	.	CCA	C	860.54	PASS	AB=0.976;AC=34;AF=0.654;AN=52;BaseQRankSum=7.604;DP=547;FS=21.116;HRun=0;HaplotypeScore=126.9249;InbreedingCoeff=-0.1539;MQ=66.65;MQ0=12;MQRankSum=-6.687;QD=2.05;ReadPosRankSum=-1.486;VQSLOD=0.8941;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:28:2.63:55,3,0	1/1:12,0:12:3.82:45,4,0	./.	./.	0/0:18,0:18:3.04:0,3,72	0/1:19,0:19:37.13:37,0,51	0/1:18,0:18:15.26:28,0,15	0/1:33,0:32:3.13:3,0,61	1/1:24,0:24:25.57:125,26,0	1/1:10,0:10:12.37:62,12,0	1/1:14,0:14:1.86:17,2,0	0/1:12,0:12:1.17:42,0,1	1/1:20,0:20:11.36:55,11,0	1/1:18,0:18:22.68:111,23,0	0/1:28,0:28:23.26:61,0,23	0/1:16,0:16:7.70:8,0,13	0/1:27,0:25:35.08:35,0,118	0/1:14,5:19:13.74:54,0,14	0/1:10,1:11:13.09:13,0,48	0/1:22,0:21:35.79:36,0,40	0/0:23,0:23:15.39:0,15,139	0/0:20,0:20:1.59:0,2,84	1/1:18,0:17:2.18:108,2,0	1/1:16,0:15:4.20:22,4,0	0/1:17,0:17:11.16:11,0,34	0/1:15,0:14:25.52:28,0,26	1/1:17,0:17:1.35:40,1,0	1/1:5,0:5:2.60:10,3,0
chr10	40169362	.	CACACACACACACAA	C	4868.34	PASS	AB=0.940;AC=22;AF=0.393;AN=56;BaseQRankSum=-1.534;DP=620;FS=14.122;HRun=0;HaplotypeScore=219.5357;InbreedingCoeff=-0.2753;MQ=52.69;MQ0=19;MQRankSum=0.385;QD=12.02;ReadPosRankSum=-2.370;VQSLOD=2.4096;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:25,1:26:25.02:385,0,25	0/1:15,0:15:0.88:1,0,74	0/0:32,0:6:11.14:0,11,124	0/0:31,0:12:19.29:0,19,259	0/0:21,0:21:0.38:0,0,390	0/1:8,19:27:12.42:452,0,12	1/1:9,2:11:1.85:563,2,0	0/1:28,0:26:99:209,0,404	0/1:3,17:20:12.20:1068,0,12	0/1:23,0:22:99:225,0,221	0/0:14,0:14:11.97:0,12,194	0/1:13,0:13:99:111,0,106	0/1:24,0:24:8.12:242,0,8	1/1:20,1:20:26.12:586,26,0	0/0:30,0:30:30.29:0,30,490	0/1:14,0:14:18.86:19,0,92	0/1:29,0:27:85.04:85,0,737	0/1:16,0:15:10.64:11,0,267	0/1:19,0:19:11:11,0,538	0/0:27,0:26:21.54:0,22,388	0/1:33,0:33:99:106,0,549	0/0:27,0:27:9.30:0,9,361	0/1:21,1:21:18.60:422,0,19	1/1:19,0:18:1.08:202,1,0	0/0:22,0:22:12.02:0,12,183	0/1:29,0:28:99:163,0,630	0/1:16,0:16:9.80:10,0,417	0/0:10,0:10:3.01:0,3,58
chr10	40169364	.	CACACACACACAA	C	6195.56	PASS	AB=1.000;AC=26;AF=0.464;AN=56;BaseQRankSum=-2.311;DP=621;FS=18.441;HRun=0;HaplotypeScore=200.0177;InbreedingCoeff=0.0970;MQ=52.80;MQ0=18;MQRankSum=-0.051;QD=15.45;ReadPosRankSum=-0.901;VQSLOD=1.9187;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:23,1:24:29.45:586,29,0	0/1:16,0:16:24.05:24,0,39	0/0:33,0:9:20.12:0,20,199	0/0:33,0:12:16.28:0,16,218	0/0:21,0:21:23.25:0,23,293	0/1:27,0:27:33.39:313,0,33	1/1:10,0:10:6.58:342,7,0	0/1:25,0:24:99:230,0,210	1/1:19,0:19:11.76:796,12,0	0/1:23,0:22:86.74:330,0,87	0/0:14,0:14:11.93:0,12,121	0/1:13,0:13:6.12:263,0,6	1/1:2,22:24:11.76:440,12,0	1/1:2,19:20:26.87:913,27,0	0/0:30,0:30:18.66:0,19,285	0/1:13,0:13:43.43:48,0,43	0/1:29,0:27:99:134,0,450	0/1:16,0:15:13.93:14,0,145	0/1:22,0:22:99:105,0,296	0/0:28,0:27:20.03:0,20,235	0/1:32,0:32:99:109,0,323	0/0:27,0:27:20.50:0,20,236	1/1:15,7:21:25.71:923,26,0	1/1:19,0:18:22.69:325,23,0	0/0:24,0:24:12.02:0,12,137	0/1:30,0:29:99:242,0,343	0/1:16,0:16:60.55:61,0,194	0/0:10,0:10:3.01:0,3,31
chr10	40169366	.	CACACACACAA	C	5865.32	PASS	AB=0.982;AC=28;AF=0.500;AN=56;BaseQRankSum=-1.074;DP=620;FS=7.443;HRun=0;HaplotypeScore=186.7881;InbreedingCoeff=-0.0083;MQ=55.01;MQ0=17;MQRankSum=-0.362;QD=12.89;ReadPosRankSum=0.799;VQSLOD=3.3306;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:23:40.51:417,41,0	0/1:16,0:16:1.21:105,0,1	0/0:36,0:12:26.17:0,26,273	0/0:34,0:13:19.27:0,19,249	0/0:22,0:22:8.95:0,9,115	0/1:25,0:25:54.28:257,0,54	0/1:9,0:10:25.62:248,0,26	0/1:24,0:24:77.24:241,0,77	1/1:19,0:19:30.09:712,30,0	0/1:21,2:22:2.72:550,0,3	0/0:13,0:13:3.39:0,3,44	1/1:9,4:13:32.52:526,33,0	1/1:23,0:23:11.91:306,12,0	1/1:21,0:20:26.87:634,27,0	0/1:30,0:30:12.52:13,0,109	0/1:11,1:12:18.40:94,0,18	0/1:29,0:28:99:221,0,209	0/1:15,0:15:40.07:40,0,65	0/1:22,0:22:99:165,0,117	0/1:28,0:27:10.59:11,0,86	0/1:32,0:32:99:131,0,151	0/0:26,0:26:13.80:0,14,127	1/1:22,0:21:30.21:543,30,0	1/1:19,0:18:21.64:212,22,0	0/0:25,0:25:9.64:0,10,85	0/1:31,0:30:98.78:323,0,99	0/1:16,0:16:29.90:118,0,30	0/0:9,0:9:1.82:0,2,5
chr10	40169368	.	CACACACAA	C	6961.07	PASS	AB=0.987;AC=41;AF=0.732;AN=56;BaseQRankSum=2.299;DP=629;FS=10.280;HRun=0;HaplotypeScore=171.1571;InbreedingCoeff=-0.0506;MQ=56.27;MQ0=17;MQRankSum=-2.445;QD=12.48;ReadPosRankSum=5.611;VQSLOD=2.8617;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:24:31.56:329,32,0	1/1:3,13:16:6.49:195,6,0	0/0:35,0:12:26.17:0,26,273	0/0:36,0:15:19.31:0,19,261	0/1:24,0:24:16.90:27,0,17	0/1:24,0:25:45.17:205,0,45	0/1:11,0:11:9.80:237,0,10	1/1:11,16:26:8.42:393,8,0	1/1:19,0:19:30.09:587,30,0	1/1:23,2:24:59.81:723,60,0	1/1:1,13:14:11.88:124,12,0	1/1:14,0:14:13.67:349,14,0	1/1:22,0:22:11.94:250,12,0	1/1:21,0:20:27.01:519,27,0	0/1:29,1:30:17.42:182,0,17	0/1:13,0:13:9.10:81,0,9	0/1:29,0:28:75.23:344,0,75	0/1:17,0:16:28.93:167,0,29	1/1:21,0:21:1.26:238,1,0	0/1:25,2:26:22.88:158,0,23	0/1:29,0:29:49.16:199,0,49	0/1:25,0:25:44.52:45,0,77	1/1:25,0:24:30.50:498,31,0	1/1:21,0:20:25.31:212,25,0	0/1:26,0:26:32.83:33,0,34	1/1:29,1:29:43.95:533,44,0	1/1:13,1:14:35.30:312,35,0	1/1:9,0:9:2.98:21,3,0
chr10	40169370	.	CACACAA	C	7736.08	PASS	AB=0.571;AC=51;AF=0.911;AN=56;BaseQRankSum=2.158;DP=627;FS=0.000;HRun=0;HaplotypeScore=156.2834;InbreedingCoeff=0.5676;MQ=57.12;MQ0=13;MQRankSum=-3.795;QD=13.89;ReadPosRankSum=5.410;VQSLOD=3.4927;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:24:30.33:277,30,0	1/1:16,0:16:8.56:118,9,0	0/0:33,0:13:29.17:0,29,300	0/0:37,0:18:28.33:0,28,361	0/1:6,18:24:10.93:161,0,11	1/1:25,0:25:11.98:169,12,0	1/1:11,0:11:20.61:233,21,0	1/1:28,0:27:56.37:436,56,0	1/1:19,0:19:30.09:461,30,0	1/1:24,0:23:57.01:588,57,0	1/1:14,0:14:7.82:65,8,0	1/1:15,0:15:8.54:309,9,0	1/1:22,0:22:11.95:195,12,0	1/1:21,0:20:26.82:407,27,0	1/1:5,25:30:20.69:419,21,0	1/1:2,10:12:8.89:124,9,0	1/1:26,3:28:59.44:567,59,0	1/1:17,0:16:5.33:94,5,0	1/1:21,0:21:43.07:350,43,0	1/1:5,21:26:17.72:258,18,0	1/1:29,0:29:35.31:329,35,0	1/1:5,19:24:8.47:132,8,0	1/1:24,0:25:46.50:446,47,0	1/1:20,0:19:27.50:208,27,0	1/1:2,25:27:6.02:132,6,0	1/1:6,25:30:74.66:742,75,0	1/1:9,5:14:32.94:450,33,0	1/1:0,9:9:3.01:66,3,0
chr10	40169374	.	CAA	C	5275.02	PASS	AB=0.994;AC=45;AF=0.804;AN=56;BaseQRankSum=2.130;DP=611;FS=0.000;HRun=3;HaplotypeScore=134.1507;InbreedingCoeff=0.1579;MQ=60.53;MQ0=13;MQRankSum=-4.796;QD=9.73;ReadPosRankSum=6.595;VQSLOD=1.4057;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:24,1:24:38.13:323,38,0	1/1:15,0:15:7.89:61,8,0	0/0:33,0:16:31.15:0,31,345	0/0:36,0:19:36.08:0,36,422	0/1:21,1:22:18.04:20,0,18	0/1:24,0:24:22.92:87,0,23	1/1:10,0:10:26.66:187,27,0	1/1:30,0:29:49.77:485,50,0	1/1:19,0:19:29.76:210,30,0	1/1:22,0:21:62.82:538,63,0	1/1:13,0:14:8.51:46,9,0	1/1:14,0:14:34.98:252,35,0	1/1:22,0:22:11.79:83,12,0	1/1:21,0:20:26.71:185,27,0	1/1:28,0:28:1.65:102,2,0	1/1:12,0:12:8.75:55,9,0	0/1:28,0:27:22.47:327,0,22	1/1:17,0:16:19.51:117,20,0	1/1:20,0:20:32.12:336,32,0	0/1:25,0:25:9.09:65,0,9	0/1:29,0:29:10.68:198,0,11	0/1:23,0:23:13.35:54,0,13	1/1:23,1:24:59.52:501,60,0	1/1:19,1:19:27.08:242,27,0	0/1:26,0:26:16.89:30,0,17	1/1:30,0:29:53.32:520,53,0	1/1:13,0:13:31.65:233,32,0	1/1:9,0:9:2.96:19,3,0
chr10	40171572	.	T	TAC	2735.43	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=7.129;DP=724;FS=0.000;HRun=0;HaplotypeScore=89.5680;InbreedingCoeff=0.9480;MQ=72.19;MQ0=0;MQRankSum=-0.592;QD=35.53;ReadPosRankSum=1.173;VQSLOD=5.5251;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,21:25:49.05:930,49,0	0/0:13,0:13:30.10:0,30,375	0/0:24,0:13:4.08:0,4,134	0/0:22,0:22:23.45:0,23,200	0/0:31,0:30:78.25:0,78,975	0/0:27,0:27:72.20:0,72,875	0/0:20,0:20:54.15:0,54,661	0/0:34,0:34:75.23:0,75,923	0/0:27,0:27:78.22:0,78,949	0/0:32,0:32:81.24:0,81,991	0/0:19,0:19:48.15:0,48,595	0/0:30,0:30:87.27:0,87,1075	1/1:7,22:29:60.12:958,60,0	1/1:1,21:23:60.21:990,60,0	0/0:29,0:29:78.25:0,78,975	0/0:31,0:31:84.27:0,84,1049	0/0:17,0:17:39.58:0,40,474	0/0:22,0:22:63.20:0,63,787	0/0:16,0:17:41.96:0,42,501	0/0:28,0:28:72.22:0,72,887	0/0:45,0:45:99:0,120,1487	0/0:36,0:36:93.25:0,93,1113	0/0:23,0:23:48.12:0,48,584	0/0:26,0:26:63.18:0,63,773	0/0:24,0:24:48.15:0,48,600	0/0:21,0:21:60.19:0,60,750	0/0:38,0:39:87.06:0,87,1022	0/0:9,0:9:24.08:0,24,300
chr10	40171888	.	C	CA	3055.46	PASS	AB=0.781;AC=23;AF=0.411;AN=56;BaseQRankSum=1.542;DP=578;FS=5.322;HRun=11;HaplotypeScore=70.8403;InbreedingCoeff=0.7336;MQ=56.47;MQ0=11;MQRankSum=-2.607;QD=11.89;ReadPosRankSum=-0.657;VQSLOD=3.2232;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:32:30.46:235,30,0	0/1:5,10:16:13.57:225,0,14	0/1:9,0:9:7.52:8,0,66	0/0:10,0:9:2.61:0,3,120	1/1:9,13:19:30.02:290,30,0	0/0:15,0:15:35.55:0,36,267	0/0:16,0:16:38.82:0,39,299	0/0:28,0:26:59.49:0,59,464	0/0:27,0:27:59.73:0,60,464	1/1:6,14:19:21.84:397,22,0	1/1:7,14:23:10.81:406,11,0	0/0:29,0:29:59.70:0,60,461	1/1:13,0:27:22.83:118,23,0	1/1:8,0:15:19.97:104,20,0	1/1:4,14:19:18.68:356,19,0	1/1:5,10:15:6.66:235,7,0	1/1:3,16:18:42.08:426,42,0	0/1:10,5:15:28.43:104,0,28	0/0:17,1:18:8.32:0,8,241	0/0:20,1:19:17.34:0,17,316	0/0:20,1:21:23.58:0,24,361	1/1:6,15:22:19.68:363,20,0	0/0:18,0:18:41.83:0,42,325	0/0:18,0:21:41.58:0,42,291	0/0:23,0:22:35.81:0,36,279	0/0:20,0:21:33.33:0,33,387	0/0:35,0:34:82.67:0,83,631	0/0:17,0:13:29.86:0,30,232
chr10	40172291	.	AATTT	A	3635.19	PASS	AB=1.000;AC=37;AF=0.740;AN=50;BaseQRankSum=-0.752;DP=235;FS=17.349;HRun=0;HaplotypeScore=60.5486;InbreedingCoeff=0.4630;MQ=77.51;MQ0=3;MQRankSum=-0.159;QD=20.20;ReadPosRankSum=1.888;VQSLOD=1.8423;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:30.07:0,30,652	1/1:0,6:6:15.05:251,15,0	0/0:8,0:5:9:0,9,84	0/0:23,0:14:0.78:0,1,68	1/1:0,18:18:27.01:443,27,0	1/1:10,0:10:20.91:158,21,0	1/1:7,0:7:14.96:141,15,0	0/1:15,0:15:51.48:51,0,131	1/1:5,0:5:5.84:45,6,0	1/1:3,7:10:18.02:257,18,0	1/1:1,12:12:24.08:409,24,0	1/1:5,0:5:8.96:68,9,0	0/0:6,0:6:15.05:0,15,382	0/0:3,0:3:6.01:0,6,101	1/1:1,11:12:24.05:395,24,0	1/1:1,6:7:9.03:144,9,0	1/1:1,13:14:24.08:426,24,0	1/1:1,15:16:29.82:532,30,0	0/1:8,0:8:57.84:58,0,91	1/1:2,0:2:3:25,3,0	./.	./.	1/1:9,0:9:5.97:45,6,0	1/1:3,0:3:2.99:23,3,0	0/1:9,0:9:13.94:14,0,61	1/1:7,0:7:9:81,9,0	1/1:4,0:4:8.95:68,9,0	./.
chr10	40172292	.	ATTT	A	2334.77	PASS	AB=1.000;AC=24;AF=0.462;AN=52;BaseQRankSum=2.503;DP=228;FS=0.609;HRun=3;HaplotypeScore=61.8490;InbreedingCoeff=0.4964;MQ=78.19;MQ0=3;MQRankSum=0.022;QD=17.29;ReadPosRankSum=5.570;VQSLOD=0.5186;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:30.10:0,30,642	1/1:6,0:6:15.64:122,16,0	0/0:8,0:5:9.03:0,9,161	0/0:23,0:14:0.70:0,1,143	0/1:18,0:18:99:172,0,111	1/1:0,10:10:21.07:391,21,0	1/1:0,7:7:15.05:273,15,0	0/0:13,0:13:25.08:0,25,280	1/1:0,5:5:5.75:112,6,0	0/1:10,0:10:56.05:109,0,56	0/1:13,0:12:15.34:179,0,15	1/1:0,5:5:9.03:168,9,0	0/0:6,0:6:18.04:0,18,363	0/0:3,0:3:9:0,9,144	1/1:11,1:12:24.03:252,24,0	0/1:7,0:7:14.30:54,0,14	1/1:14,0:14:24.01:218,24,0	1/1:16,0:16:28:269,28,0	0/0:8,0:8:14.60:0,15,169	0/0:2,0:2:3.40:0,3,18	./.	0/0:1,0:1:3:0,3,26	1/1:0,9:9:11.82:144,12,0	1/1:0,3:3:3.01:56,3,0	0/0:9,0:9:22.05:0,22,188	0/0:6,0:6:7.81:0,8,73	0/0:4,0:4:3.58:0,4,10	./.
chr10	40174077	.	TC	T	2684.43	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=1.323;DP=664;FS=1.522;HRun=1;HaplotypeScore=87.9816;InbreedingCoeff=0.9998;MQ=90.17;MQ0=0;MQRankSum=-5.200;QD=35.32;ReadPosRankSum=3.116;VQSLOD=3.9586;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,35:35:96.14:1319,96,0	0/0:11,0:11:33.10:0,33,504	0/0:26,0:26:68.43:0,68,1144	0/0:25,0:25:66.11:0,66,984	0/0:23,0:23:69.20:0,69,1051	0/0:20,0:20:60.20:0,60,958	0/0:19,0:19:57.15:0,57,835	0/0:36,0:36:99:0,108,1585	0/0:19,0:19:57.18:0,57,885	0/0:28,0:28:84.27:0,84,1318	0/0:21,0:21:60.20:0,60,955	0/0:28,0:28:81.28:0,81,1291	1/1:0,16:16:42.14:587,42,0	1/1:0,25:25:66.22:921,66,0	0/0:23,0:23:69.22:0,69,1081	0/0:21,0:21:63.21:0,63,1007	0/0:29,0:29:87.28:0,87,1360	0/0:25,0:24:72.22:0,72,1122	0/0:27,0:27:75.24:0,75,1153	0/0:20,0:20:57.19:0,57,910	0/0:44,0:44:99:0,132,2107	0/0:20,0:20:60.20:0,60,959	0/0:21,0:21:57.17:0,57,885	0/0:28,0:28:84.27:0,84,1313	0/0:16,0:16:45.12:0,45,646	0/0:30,0:30:90.28:0,90,1395	0/0:16,0:16:48.16:0,48,767	0/0:12,0:12:36.12:0,36,569
chr10	40174683	.	C	CA	8434.54	PASS	AB=0.875;AC=19;AF=0.339;AN=56;BaseQRankSum=2.816;DP=641;FS=28.963;HRun=4;HaplotypeScore=156.2472;InbreedingCoeff=0.8849;MQ=51.00;MQ0=5;MQRankSum=-9.886;QD=32.57;ReadPosRankSum=1.898;VQSLOD=2.2443;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,104,1145	1/1:0,11:11:33.11:457,33,0	0/0:22,0:9:20.72:0,21,206	0/0:20,0:12:26.97:0,27,315	1/1:9,22:31:77.53:998,78,0	0/0:24,0:24:27.13:0,27,509	0/0:15,0:14:17.03:0,17,305	0/0:27,0:26:60.09:0,60,601	0/0:24,0:24:45.75:0,46,540	1/1:9,22:31:71.02:961,71,0	1/1:3,24:27:78.03:1034,78,0	0/0:21,0:21:32.62:0,33,447	0/0:26,0:26:73.90:0,74,810	0/0:28,0:28:78.22:0,78,890	1/1:4,25:29:77.99:1051,78,0	1/1:2,26:28:68.28:987,68,0	1/1:8,27:35:50.98:1118,51,0	1/1:1,18:19:54.18:743,54,0	0/0:20,0:16:28.43:0,28,318	0/0:31,0:31:72.72:0,73,886	0/0:11,0:11:6.02:0,6,70	1/1:3,23:26:77.66:1018,78,0	0/0:16,0:16:8.11:0,8,304	0/0:12,0:12:15.11:0,15,219	0/0:16,0:16:44.26:0,44,415	0/1:18,3:20:68.15:68,0,496	0/0:21,0:21:14.57:0,15,315	0/0:6,0:6:15.05:0,15,178
chr10	40174691	.	CAAACAAA	C	4109.14	PASS	AB=0.989;AC=26;AF=0.464;AN=56;BaseQRankSum=-10.315;DP=636;FS=33.684;HRun=0;HaplotypeScore=237.9042;InbreedingCoeff=0.0022;MQ=49.59;MQ0=5;MQRankSum=0.220;QD=9.60;ReadPosRankSum=-5.031;VQSLOD=0.4465;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,101,1758	0/1:11,0:11:7.84:8,0,202	0/0:19,0:8:11.68:0,12,72	0/0:17,0:8:8.59:0,9,52	0/1:26,0:26:99:113,0,455	0/1:26,0:26:0.15:0,0,549	0/1:18,0:17:99:101,0,219	1/1:20,3:23:26.28:552,26,0	0/1:22,0:22:99:140,0,160	0/1:30,0:30:81.67:82,0,306	0/1:27,0:27:99:143,0,434	0/1:21,0:21:18.29:18,0,204	0/0:28,0:28:54.32:0,54,1511	0/0:28,0:28:74.53:0,75,1656	0/0:29,0:29:14.71:0,15,354	0/0:24,0:24:21.93:0,22,458	0/1:37,0:37:39.95:40,0,474	0/1:18,0:18:38.56:39,0,227	0/1:17,2:18:17.71:401,0,18	1/1:25,5:30:52.18:734,52,0	1/1:1,11:12:2.97:20,3,0	0/1:27,0:27:63.70:64,0,506	0/0:20,0:19:10.47:0,10,277	0/1:13,0:13:1.30:1,0,97	1/1:8,3:13:29.29:410,29,0	0/1:23,0:22:10.77:353,0,11	1/1:22,1:24:55.76:820,56,0	1/1:5,0:5:3.75:71,4,0
chr10	40174698	.	A	AC	5252.28	PASS	AB=0.935;AC=28;AF=0.500;AN=56;BaseQRankSum=9.196;DP=649;FS=2.263;HRun=0;HaplotypeScore=177.8816;InbreedingCoeff=0.6619;MQ=53.09;MQ0=4;MQRankSum=-6.159;QD=12.54;ReadPosRankSum=9.660;VQSLOD=4.7904;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:18,17:35:79.73:610,80,0	1/1:9,2:11:32.66:224,33,0	0/0:24,0:8:9.24:0,9,71	0/0:15,0:5:5.50:0,5,34	1/1:25,0:25:59.09:354,59,0	0/0:31,0:31:86.82:0,87,654	0/0:18,0:17:47.45:0,47,349	0/1:26,4:30:41.06:41,0,249	0/0:20,0:20:50.13:0,50,364	1/1:30,0:30:67.11:484,67,0	1/1:29,0:29:66.65:424,67,0	0/0:23,0:23:55.66:0,56,453	1/1:11,16:27:76.23:544,76,0	1/1:13,17:30:78.42:610,78,0	1/1:27,0:27:64.34:427,64,0	1/1:21,0:21:62.15:413,62,0	1/1:25,9:33:52.67:408,53,0	1/1:13,3:16:45.39:307,45,0	0/1:22,1:22:6.59:7,0,175	0/1:31,1:31:20.18:20,0,393	0/0:12,0:12:2.97:0,3,20	1/1:23,0:23:59.76:362,60,0	0/0:21,0:20:54.06:0,54,448	0/0:16,0:16:27.58:0,28,205	0/0:16,0:16:32.78:0,33,231	0/1:24,2:25:16.36:16,0,299	0/0:28,1:29:5.70:0,6,237	0/0:5,0:5:11.37:0,11,86
chr10	40174705	.	A	AC	766.62	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=-1.009;DP=612;FS=0.477;HRun=0;HaplotypeScore=181.4819;InbreedingCoeff=0.7840;MQ=53.72;MQ0=4;MQRankSum=4.099;QD=7.74;ReadPosRankSum=5.446;VQSLOD=3.6257;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:19,16:35:12.12:334,12,0	0/0:11,0:11:30.38:0,30,160	0/0:21,0:8:18.22:0,18,192	0/1:11,0:4:0.67:1,0,14	0/0:25,0:25:59.62:0,60,324	0/0:28,0:28:78.23:0,78,590	0/0:14,0:14:33.09:0,33,233	0/0:28,0:28:48.30:0,48,516	0/0:17,0:17:44.74:0,45,318	0/0:29,0:29:68.67:0,69,353	0/0:28,0:28:70.72:0,71,381	0/0:23,0:23:62.11:0,62,514	1/1:10,15:25:20.91:255,21,0	1/1:12,16:28:7.48:307,7,0	0/0:24,0:24:54.75:0,55,291	0/0:24,0:24:62.24:0,62,342	0/0:27,0:26:56.01:0,56,294	0/0:16,0:16:42.75:0,43,246	0/0:21,0:20:46.04:0,46,314	0/0:30,0:29:64.13:0,64,463	0/0:12,0:12:3:0,3,27	0/0:24,0:24:62.34:0,62,346	0/0:22,0:21:54.44:0,54,484	0/0:17,0:17:28.09:0,28,216	0/0:16,0:16:41.88:0,42,351	0/0:22,1:22:46.59:0,47,377	0/0:30,0:30:62.74:0,63,394	0/0:3,0:3:5.67:0,6,36
chr10	40176577	.	C	CG	9544.54	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-5.279;DP=611;FS=5.800;HRun=5;HaplotypeScore=83.5896;InbreedingCoeff=0.9724;MQ=76.69;MQ0=0;MQRankSum=-0.400;QD=27.67;ReadPosRankSum=1.694;VQSLOD=5.1933;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:86.42:0,86,864	1/1:0,14:14:23.88:293,24,0	0/0:40,0:28:51.29:0,51,421	0/0:28,0:20:2.93:0,3,144	1/1:5,19:24:50.94:575,51,0	0/0:16,0:16:28.20:0,28,361	0/0:23,0:23:62.64:0,63,613	1/1:3,16:18:47.78:516,48,0	0/0:23,0:23:63.11:0,63,646	1/1:2,12:14:33.02:372,33,0	1/1:5,16:21:24.08:315,24,0	0/0:19,0:19:57.11:0,57,591	0/0:11,0:11:27.06:0,27,289	0/0:19,0:19:48.10:0,48,500	1/1:0,28:28:72.23:947,72,0	1/1:0,17:17:39.13:512,39,0	1/1:3,29:32:72.02:981,72,0	1/1:1,14:15:36.12:473,36,0	1/1:0,15:15:39.02:418,39,0	1/1:4,16:20:47.46:493,47,0	1/1:4,30:34:72.20:925,72,0	1/1:3,15:18:42:505,42,0	0/0:12,0:12:30.06:0,30,308	0/0:41,0:41:99:0,120,1257	1/1:0,20:20:39.13:512,39,0	1/1:2,22:24:66.11:781,66,0	1/1:1,23:24:54.11:688,54,0	1/1:0,6:6:18.06:237,18,0
chr10	40176582	.	G	GA	3025.29	PASS	AB=1.000;AC=31;AF=0.554;AN=56;BaseQRankSum=12.172;DP=614;FS=1.911;HRun=6;HaplotypeScore=100.4879;InbreedingCoeff=0.7065;MQ=76.92;MQ0=0;MQRankSum=-1.759;QD=8.67;ReadPosRankSum=5.011;VQSLOD=0.4854;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:75.79:0,76,822	1/1:16,0:16:1.23:77,1,0	0/0:38,0:27:28.49:0,28,447	0/0:28,0:20:25.53:0,26,191	1/1:19,3:23:8.37:262,8,0	0/0:15,0:15:10.59:0,11,377	0/0:23,0:23:63.12:0,63,629	0/1:21,0:21:48.12:97,0,48	0/0:22,0:22:57.11:0,57,573	1/1:13,0:13:17.73:78,18,0	1/1:15,0:15:22.47:122,22,0	0/0:22,0:22:63.11:0,63,623	0/0:10,0:10:4.66:0,5,241	0/0:18,0:18:48.09:0,48,484	1/1:30,0:30:26.62:286,27,0	1/1:17,0:17:36.56:182,37,0	1/1:32,0:32:47.49:341,47,0	0/1:18,0:18:32.34:128,0,32	0/1:17,0:17:27.69:57,0,28	1/1:17,2:19:8.73:197,9,0	1/1:31,1:32:46.75:377,47,0	1/1:18,0:18:37.01:219,37,0	0/0:13,0:13:18.05:0,18,285	0/0:40,0:40:99:0,114,1161	1/1:23,0:23:36.81:198,37,0	1/1:26,0:26:29.42:264,29,0	1/1:23,0:23:47.60:265,48,0	1/1:6,0:6:17.14:91,17,0
chr10	40177433	.	A	AT	2617.51	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-11.573;DP=568;FS=1.431;HRun=8;HaplotypeScore=50.7622;InbreedingCoeff=0.9783;MQ=80.24;MQ0=0;MQRankSum=-0.222;QD=24.24;ReadPosRankSum=0.755;VQSLOD=4.2068;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,17:19:36.11:415,36,0	0/0:6,0:6:15.01:0,15,137	0/0:16,0:15:35.92:0,36,316	0/0:14,0:14:17.05:0,17,207	0/0:24,0:24:62.97:0,63,558	1/1:3,18:21:48.14:554,48,0	1/1:3,13:16:8.64:352,9,0	0/0:37,0:37:87:0,87,779	1/1:4,18:22:51.15:589,51,0	0/0:19,0:19:48.01:0,48,439	0/0:30,0:30:87.05:0,87,796	0/0:24,0:24:66.03:0,66,604	1/1:3,17:20:48.13:546,48,0	1/1:0,10:10:30.09:346,30,0	0/0:24,0:24:69.03:0,69,631	0/0:26,0:26:63:0,63,567	0/0:12,0:12:36.02:0,36,329	0/0:15,0:15:39:0,39,352	0/0:20,0:20:31.85:0,32,417	0/0:28,0:28:65.99:0,66,594	0/0:18,0:18:51.03:0,51,467	0/0:16,0:16:42.01:0,42,384	0/0:33,0:33:90.03:0,90,819	0/0:5,0:5:15.01:0,15,137	0/0:20,0:20:57.03:0,57,522	0/0:31,0:31:86.98:0,87,786	0/0:31,0:31:87.04:0,87,796	0/0:11,0:11:33.02:0,33,302
chr10	40177657	.	GAATC	G	7355.22	PASS	AB=0.543;AC=17;AF=0.304;AN=56;BaseQRankSum=13.587;DP=573;FS=1.215;HRun=0;HaplotypeScore=97.0719;InbreedingCoeff=0.9120;MQ=80.43;MQ0=0;MQRankSum=-5.357;QD=38.92;ReadPosRankSum=4.968;VQSLOD=5.1261;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:63.20:0,63,1529	1/1:2,7:9:18.06:311,18,0	0/0:17,0:17:27.56:0,28,628	0/0:21,0:21:39.85:0,40,820	1/1:3,26:29:78.27:1347,78,0	0/0:17,0:17:45.15:0,45,1108	0/0:15,0:15:39.12:0,39,931	0/0:31,0:31:66.21:0,66,1570	0/0:23,0:23:57.16:0,57,1309	1/1:6,21:27:63.22:1088,63,0	1/1:5,13:18:33.03:533,33,0	0/0:23,0:23:66.20:0,66,1568	0/0:20,0:20:54.19:0,54,1338	0/0:9,0:9:27.09:0,27,678	1/1:4,32:36:87.30:1466,87,0	0/1:3,16:19:34.43:631,0,34	1/1:3,22:25:66.22:1099,66,0	1/1:2,11:13:27.09:466,27,0	0/0:15,0:15:39.12:0,39,893	0/0:39,0:39:87.29:0,87,2143	0/0:14,0:14:39.12:0,39,909	1/1:3,10:13:24.08:413,24,0	0/0:22,0:22:48.16:0,48,1165	0/0:7,0:7:21.05:0,21,479	0/0:21,0:21:54.19:0,54,1365	0/0:31,1:32:38.46:0,38,2062	0/0:28,0:28:75.26:0,75,1863	0/0:7,0:7:21.07:0,21,531
chr10	40178610	.	GA	G	1746.91	PASS	AB=0.807;AC=31;AF=0.596;AN=52;BaseQRankSum=1.103;DP=235;FS=31.283;HRun=1;HaplotypeScore=47.0985;InbreedingCoeff=-0.2726;MQ=104.64;MQ0=9;MQRankSum=-2.122;QD=9.65;ReadPosRankSum=-0.222;VQSLOD=-0.6114;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:4,2:6:55.09:95,0,55	1/1:2,0:2:6.01:68,6,0	0/0:42,0:31:41.80:0,42,874	0/1:46,0:30:1.92:2,0,456	./.	0/1:6,1:6:13.76:14,0,125	0/1:4,7:11:99:140,0,136	1/1:3,6:8:18.01:224,18,0	0/1:3,3:6:67.56:68,0,98	0/1:8,0:7:10.49:10,0,192	0/1:3,0:3:19.23:19,0,40	0/1:9,2:11:99:114,0,145	0/1:4,1:4:29.87:30,0,125	0/1:2,0:2:35.49:35,0,40	0/1:10,2:11:33.23:33,0,229	0/0:1,3:4:3.01:0,3,46	0/1:2,1:3:17.30:57,0,17	0/1:3,4:7:99:108,0,119	1/1:0,4:4:12.03:150,12,0	1/1:1,6:7:9.87:105,10,0	1/1:0,4:4:6.02:84,6,0	0/1:3,4:7:48.96:72,0,49	0/0:1,2:2:3.01:0,3,46	1/1:0,4:4:6.02:81,6,0	1/1:1,3:4:6.01:84,6,0	0/1:3,4:5:42.83:101,0,43	./.	1/1:0,5:5:15.05:210,15,0
chr10	40179576	.	G	GA	11158.86	PASS	AB=0.559;AC=45;AF=0.804;AN=56;BaseQRankSum=-2.858;DP=689;FS=2.119;HRun=9;HaplotypeScore=85.9271;InbreedingCoeff=0.9144;MQ=77.06;MQ0=0;MQRankSum=-1.451;QD=21.17;ReadPosRankSum=2.266;VQSLOD=5.6188;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:65,2:67:99:0,135,1394	1/1:5,0:5:11.81:74,12,0	0/0:18,0:17:26.17:0,26,212	0/0:20,0:20:14.15:0,14,253	1/1:16,0:16:41.38:274,41,0	1/1:2,19:22:56.99:611,57,0	1/1:2,24:26:63.64:698,64,0	1/1:6,15:21:22.53:464,23,0	1/1:4,16:20:48.13:530,48,0	1/1:27,0:27:66.20:363,66,0	1/1:19,0:19:50.18:316,50,0	1/1:4,30:34:75.20:828,75,0	0/0:29,0:29:80.98:0,81,703	0/0:25,2:27:24.20:0,24,524	1/1:32,0:32:85.72:558,86,0	1/1:22,0:22:61.79:377,62,0	1/1:35,0:35:85.66:547,86,0	1/1:26,0:26:64.88:410,65,0	0/1:4,15:19:0.98:447,0,1	1/1:2,22:24:63.09:670,63,0	1/1:5,14:19:18.97:411,19,0	1/1:17,0:17:44.24:276,44,0	1/1:6,19:25:51.10:551,51,0	1/1:6,23:30:69.02:744,69,0	1/1:3,20:23:41.85:464,42,0	1/1:7,19:26:60.14:650,60,0	1/1:7,28:35:69.19:764,69,0	1/1:0,4:4:12.03:133,12,0
chr10	40179577	.	A	AC	8442.41	PASS	AB=0.995;AC=35;AF=0.625;AN=56;BaseQRankSum=0.759;DP=691;FS=0.313;HRun=0;HaplotypeScore=96.2668;InbreedingCoeff=0.1180;MQ=77.68;MQ0=0;MQRankSum=-1.001;QD=15.93;ReadPosRankSum=7.661;VQSLOD=6.3436;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:67,0:67:99:0,191,2543	1/1:0,5:5:12.04:171,12,0	0/0:18,0:16:17.44:0,17,385	0/0:22,0:22:15.41:0,15,356	1/1:1,17:18:45.01:611,45,0	0/1:22,0:22:20.63:80,0,21	1/1:25,0:25:1.11:81,1,0	0/1:23,0:23:33.45:33,0,104	1/1:18,0:18:8.58:71,9,0	1/1:0,27:28:81.19:1067,81,0	1/1:1,18:19:51.16:729,51,0	0/1:34,0:34:20.01:94,0,20	0/0:29,0:29:87.26:0,87,1178	0/0:25,0:25:67.10:0,67,946	1/1:0,33:33:87.29:1242,87,0	1/1:0,23:23:63.21:901,63,0	1/1:0,35:35:87.29:1242,87,0	1/1:0,27:27:66.22:942,66,0	0/1:18,0:18:62.59:63,0,71	0/1:23,0:23:11.40:72,0,11	0/1:18,0:19:55.43:55,0,82	1/1:0,17:18:45.15:643,45,0	0/1:23,0:23:32.53:58,0,33	0/1:30,0:30:73.89:74,0,103	0/1:23,0:23:43.79:44,0,45	0/1:27,0:27:58.88:60,0,59	0/1:35,0:35:84.64:85,0,97	1/1:4,0:4:8.15:25,8,0
chr10	40180041	.	C	CT	4298.16	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=-10.387;DP=552;FS=0.000;HRun=9;HaplotypeScore=56.0504;InbreedingCoeff=0.8967;MQ=75.50;MQ0=0;MQRankSum=0.681;QD=23.36;ReadPosRankSum=-0.242;VQSLOD=5.3592;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,1:22:26.79:0,27,462	1/1:1,7:8:18.05:199,18,0	0/0:11,0:11:9.27:0,9,115	0/1:8,0:9:10:10,0,69	1/1:2,15:19:38.87:386,39,0	0/0:30,0:30:65.96:0,66,573	0/0:12,0:12:32.98:0,33,282	0/0:30,1:31:35.75:0,36,535	0/0:20,0:20:41.90:0,42,354	1/1:5,21:27:42.97:674,43,0	1/1:4,10:14:6.95:279,7,0	0/0:21,0:22:62.02:0,62,527	0/0:21,0:21:53.95:0,54,465	0/0:21,0:21:32.93:0,33,279	1/1:0,18:18:51.14:564,51,0	1/1:2,26:28:55.16:837,55,0	1/1:3,19:22:41.59:492,42,0	1/1:3,14:17:39.11:431,39,0	0/0:15,1:16:11.81:0,12,331	0/0:23,0:23:50.92:0,51,435	0/0:13,0:13:29.99:0,30,260	1/1:5,17:22:19.02:425,19,0	0/0:25,0:25:65.97:0,66,573	0/0:16,0:16:44.99:0,45,391	0/0:32,0:32:74.94:0,75,647	0/0:27,0:27:65.98:0,66,573	0/0:18,0:19:50.02:0,50,422	0/0:7,0:7:17.99:0,18,156
chr10	40180281	.	GC	G	1933.86	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=-0.551;DP=419;FS=6.858;HRun=11;HaplotypeScore=73.8295;InbreedingCoeff=0.5348;MQ=68.64;MQ0=1;MQRankSum=-0.276;QD=12.56;ReadPosRankSum=2.749;VQSLOD=3.5261;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:15,0:15:7.71:8,0,48	0/1:8,0:8:24.24:24,0,26	0/0:21,0:16:3.53:0,4,105	0/1:13,0:9:14.90:15,0,56	0/0:12,0:12:15.49:0,15,117	1/1:2,23:26:55.96:447,56,0	1/1:5,18:24:46.97:374,47,0	0/0:12,0:13:12.80:0,13,93	1/1:0,19:19:38.95:319,39,0	0/0:9,0:9:0.34:0,0,71	0/0:11,0:11:5.73:0,6,81	1/1:2,18:20:44.92:368,45,0	0/0:12,0:12:19.57:0,20,173	0/0:11,0:11:1.20:0,1,22	0/0:16,0:16:11.58:0,12,81	0/0:18,0:18:32.67:0,33,243	0/0:18,0:18:2.16:0,2,120	0/0:20,0:19:23.51:0,24,191	0/0:18,0:18:15.74:0,16,134	0/0:8,0:9:12.31:0,12,96	0/0:12,0:12:9.80:0,10,64	0/0:18,0:17:11.16:0,11,118	1/1:0,11:11:29.95:243,30,0	1/1:2,16:18:38.94:318,39,0	0/0:10,0:10:2.93:0,3,26	0/0:12,0:12:8.61:0,9,92	0/0:16,0:16:20.26:0,20,120	0/0:8,0:8:8.52:0,9,42
chr10	40180292	.	C	CCAA	5202.72	PASS	AB=0.666;AC=32;AF=0.571;AN=56;BaseQRankSum=-6.860;DP=542;FS=102.489;HRun=0;HaplotypeScore=100.3851;InbreedingCoeff=0.0447;MQ=74.49;MQ0=1;MQRankSum=1.322;QD=12.85;ReadPosRankSum=-6.520;VQSLOD=-0.4173;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,0:22:20.86:183,21,0	1/1:4,0:9:3.82:94,4,0	0/0:19,0:14:28.35:0,28,301	0/1:14,0:11:12.26:12,0,81	1/1:4,0:19:27.47:423,27,0	0/0:28,0:28:2.42:0,2,45	0/0:21,0:21:3.65:0,4,49	1/1:3,12:19:37.23:450,37,0	0/0:23,0:23:0.21:0,0,38	1/1:2,0:16:22.63:550,23,0	1/1:3,0:18:49.80:529,50,0	0/0:22,0:22:11.47:0,11,37	0/1:17,0:18:23.86:156,0,24	0/1:1,0:14:11.65:49,0,12	0/1:3,23:29:8.02:127,0,8	0/1:7,0:22:66.09:183,0,66	0/1:3,0:27:2.75:126,0,3	0/1:6,0:21:14.90:165,0,15	1/1:5,0:20:22.88:539,23,0	0/1:4,0:11:16.40:245,0,16	0/1:3,16:21:5.55:224,0,6	0/1:8,0:19:41.46:136,0,41	0/1:15,0:15:11.78:12,0,40	0/0:24,0:24:8.26:0,8,34	1/1:5,0:19:3.90:42,4,0	1/1:3,13:17:10.73:486,11,0	0/1:2,18:23:3.33:232,0,3	1/1:0,7:9:12.04:240,12,0
chr10	40180919	.	TTAGA	T	14448.49	PASS	AB=0.535;AC=27;AF=0.482;AN=56;BaseQRankSum=17.176;DP=641;FS=5.768;HRun=0;HaplotypeScore=112.4115;InbreedingCoeff=0.9284;MQ=86.34;MQ0=0;MQRankSum=-7.182;QD=46.76;ReadPosRankSum=2.926;VQSLOD=5.4009;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:81.28:0,81,2159	0/0:7,0:7:18.06:0,18,485	0/0:25,0:25:69.24:0,69,1754	0/0:23,0:22:63.22:0,63,1618	0/0:23,0:23:69.24:0,69,1862	1/1:0,13:13:39.13:735,39,0	1/1:0,12:12:36.12:683,36,0	1/1:4,27:31:75.26:1409,75,0	1/1:1,27:28:66.23:1248,66,0	0/0:26,0:26:78.27:0,78,2077	0/0:21,0:21:63.22:0,63,1675	1/1:2,26:28:72.25:1367,72,0	0/0:24,0:24:69.24:0,69,1854	0/0:30,0:30:87.30:0,87,2339	0/0:29,0:29:84.29:0,84,2256	0/0:33,0:33:99:0,99,2577	0/0:29,0:29:84.29:0,84,2172	0/0:16,0:16:48.16:0,48,1296	1/1:1,18:19:54.18:1005,54,0	1/1:1,27:28:72.25:1359,72,0	1/1:1,24:25:51.13:968,51,0	0/0:17,0:17:48.16:0,48,1296	1/1:2,18:20:35.92:684,36,0	1/1:1,10:11:30.10:570,30,0	1/1:3,22:25:60.21:1135,60,0	0/1:3,20:23:17.81:1066,0,18	1/1:1,29:30:72.24:1367,72,0	1/1:0,16:16:45.15:855,45,0
chr10	40181712	.	AG	A	5442.85	PASS	AB=0.591;AC=27;AF=0.482;AN=56;BaseQRankSum=16.789;DP=566;FS=1.554;HRun=3;HaplotypeScore=177.7311;InbreedingCoeff=0.9032;MQ=66.41;MQ0=0;MQRankSum=-15.234;QD=23.46;ReadPosRankSum=3.583;VQSLOD=4.3839;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,114,1595	0/0:7,0:7:21.07:0,21,302	0/0:15,0:15:39.12:0,39,518	0/0:19,0:19:33.52:0,34,591	0/0:17,0:17:51.17:0,51,732	1/1:2,11:13:33.10:385,33,0	1/1:10,8:18:36.07:391,36,0	1/1:9,5:14:9.01:97,9,0	1/1:6,14:20:45.13:526,45,0	0/0:21,1:22:32.53:0,33,863	0/0:20,0:20:60.19:0,60,845	1/1:6,18:24:57.14:640,57,0	0/0:23,0:23:69.23:0,69,988	0/0:24,0:24:72.24:0,72,1036	0/0:27,0:27:75.25:0,75,1080	0/0:27,0:27:81.27:0,81,1166	0/0:48,0:48:99:0,126,1807	0/0:30,0:30:84.26:0,84,1180	1/1:3,4:7:15.05:181,15,0	1/1:7,15:22:47.87:522,48,0	1/1:9,5:14:20.78:209,21,0	0/0:16,0:16:45.15:0,45,646	1/1:5,8:13:27.04:285,27,0	1/1:5,9:14:27.08:308,27,0	1/1:2,12:14:39.12:457,39,0	0/1:8,18:26:19.39:641,0,19	1/1:6,22:28:63.18:732,63,0	1/1:3,2:5:6.02:70,6,0
chr10	40181718	.	T	TGGGAAAGC	19161.42	PASS	AB=0.752;AC=28;AF=0.500;AN=56;BaseQRankSum=17.328;DP=496;FS=4.931;HRun=0;HaplotypeScore=182.9387;InbreedingCoeff=0.8168;MQ=69.35;MQ0=0;MQRankSum=-16.147;QD=104.71;ReadPosRankSum=5.613;VQSLOD=5.4033;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,105,3075	0/0:5,0:5:15.05:0,15,435	0/0:15,0:15:42.10:0,42,1009	0/0:21,0:21:53.38:0,53,1296	0/0:17,0:17:51.18:0,51,1544	1/1:1,11:12:36.08:1495,36,0	1/1:0,8:8:24.08:1059,24,0	1/1:0,2:2:6.02:272,6,0	1/1:1,14:15:42.62:1874,43,0	0/1:25,1:26:63.95:64,0,1899	0/0:21,0:21:63.22:0,63,1869	1/1:1,16:18:54.19:2276,54,0	0/0:23,0:23:69.24:0,69,2083	0/0:25,0:25:69.24:0,69,2071	0/0:27,0:27:78.27:0,78,2332	0/0:32,0:32:90.28:0,90,2413	0/0:44,0:44:99:0,132,3774	0/0:31,0:31:87.28:0,87,2540	1/1:0,3:7:9.90:405,10,0	1/1:0,14:15:45.15:1970,45,0	1/1:0,5:5:15.05:649,15,0	0/0:15,0:15:45.11:0,45,1289	1/1:0,8:8:24.08:1043,24,0	1/1:1,9:10:27.09:1195,27,0	1/1:0,12:12:36.12:1610,36,0	0/1:3,16:20:99:2194,0,122	1/1:2,20:23:65.03:2788,65,0	1/1:0,2:2:6.02:269,6,0
chr10	40181720	.	A	AAGC	9537.28	PASS	AB=0.553;AC=27;AF=0.482;AN=56;BaseQRankSum=17.381;DP=504;FS=7.002;HRun=0;HaplotypeScore=173.2432;InbreedingCoeff=0.8906;MQ=70.91;MQ0=0;MQRankSum=-16.409;QD=58.51;ReadPosRankSum=4.501;VQSLOD=5.7901;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,105,1913	0/0:5,0:5:15.04:0,15,249	0/0:16,0:16:45.07:0,45,700	0/0:23,0:23:59.17:0,59,956	0/0:17,0:17:51.17:0,51,950	1/1:1,11:12:36.12:796,36,0	1/1:0,8:8:24.08:527,24,0	1/1:0,2:2:6.02:135,6,0	1/1:1,14:15:45.15:995,45,0	0/0:25,1:26:15.83:0,16,1231	0/0:21,0:21:63.20:0,63,1142	1/1:1,17:18:51.17:1106,51,0	0/0:25,0:25:72.23:0,72,1286	0/0:26,0:26:78.22:0,78,1348	0/0:27,0:27:81.28:0,81,1497	0/0:29,0:29:84.27:0,84,1523	0/0:42,0:42:99:0,126,2310	0/0:31,0:31:90.23:0,90,1605	1/1:5,3:8:15:245,15,0	1/1:0,15:15:45.15:964,45,0	1/1:2,5:7:15.01:262,15,0	0/0:16,0:16:45.11:0,45,768	1/1:1,8:9:24.08:530,24,0	1/1:1,9:10:27.09:589,27,0	1/1:1,12:13:36.12:795,36,0	0/1:4,16:21:54.68:1023,0,55	1/1:1,20:23:66.23:1441,66,0	1/1:0,2:2:6.02:130,6,0
chr10	40181772	.	CGGTTT	C	2116.11	PASS	AB=0.955;AC=28;AF=0.538;AN=52;BaseQRankSum=0.408;DP=619;FS=5.124;HRun=0;HaplotypeScore=138.5774;InbreedingCoeff=0.7209;MQ=77.43;MQ0=15;MQRankSum=1.025;QD=6.24;ReadPosRankSum=4.366;VQSLOD=2.2133;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:24,11:35:12.04:211,12,0	0/0:4,0:4:6.02:0,6,165	0/1:43,0:29:0:0,0,0	0/0:48,0:37:0.94:0,1,1	1/1:20,6:26:8.99:125,9,0	1/1:14,0:14:1.77:4,2,0	0/1:9,0:10:0:0,0,0	./.	1/1:8,0:9:6.90:72,7,0	0/0:21,0:21:18.06:0,18,480	0/0:21,0:21:12.04:0,12,321	1/1:14,7:21:5.77:105,6,0	1/1:10,6:16:9.03:158,9,0	1/1:19,2:21:21.07:353,21,0	1/1:26,2:28:20.57:352,21,0	1/1:22,2:23:15.05:253,15,0	1/1:32,4:33:27.05:433,27,0	0/0:32,0:32:45.12:0,45,1075	0/0:17,0:17:9.03:0,9,172	0/0:20,0:19:18.06:0,18,340	0/0:26,0:23:18.94:0,19,250	1/1:19,6:25:6.55:154,7,0	1/1:8,1:9:3.01:53,3,0	1/1:9,12:20:2.98:21,3,0	./.	0/0:22,0:22:30.06:0,30,521	0/0:26,0:24:24.04:0,24,408	0/0:2,0:2:3.01:0,3,65
chr10	40181830	.	GGTGTGT	G	1623.61	PASS	AB=0.866;AC=28;AF=0.560;AN=50;BaseQRankSum=1.919;DP=600;FS=3.991;HRun=0;HaplotypeScore=114.1386;InbreedingCoeff=0.4251;MQ=45.42;MQ0=66;MQRankSum=-1.554;QD=5.86;ReadPosRankSum=1.487;VQSLOD=1.7976;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:21:7.21:132,0,7	./.	./.	0/0:105,0:20:0.47:0,0,1	1/1:14,0:14:1.25:3,1,0	0/0:13,0:19:20.12:0,20,334	0/0:8,0:12:12.02:0,12,154	./.	0/1:13,0:16:28.24:28,0,270	0/0:13,0:21:6.83:0,7,106	0/0:13,0:13:1.77:0,2,9	0/0:15,0:19:22.60:0,23,258	0/1:12,0:14:9.83:10,0,13	0/0:9,0:9:1.33:0,1,21	1/1:13,0:14:5.93:84,6,0	1/1:9,12:20:9.23:142,9,0	1/1:20,9:27:5.99:103,6,0	0/1:20,0:28:60.94:93,0,61	1/1:11,3:13:6.01:89,6,0	1/1:14,1:13:8.99:141,9,0	1/1:22,0:18:14.80:216,15,0	1/1:16,0:16:11.73:154,12,0	0/0:10,0:11:8.18:0,8,159	0/0:20,0:26:25.56:0,26,351	1/1:3,0:8:11.99:145,12,0	1/1:10,0:11:3.01:42,3,0	1/1:14,11:23:15.05:286,15,0	1/1:4,0:3:6.02:122,6,0
chr10	40182695	.	G	GAAAA	2505.61	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=6.400;DP=288;FS=24.569;HRun=0;HaplotypeScore=89.5545;InbreedingCoeff=0.3811;MQ=50.46;MQ0=13;MQRankSum=-3.975;QD=12.59;ReadPosRankSum=-2.493;VQSLOD=0.4347;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:7:11.85:0,12,181	0/1:6,0:6:24.49:24,0,145	0/0:11,0:4:12.02:0,12,130	0/0:6,0:4:1.84:0,2,24	0/0:10,0:10:14.58:0,15,204	1/1:7,2:13:19.34:345,19,0	1/1:14,0:13:0.46:44,0,0	1/1:16,0:10:10.66:119,11,0	1/1:5,0:5:5.84:50,6,0	0/0:19,0:17:7.34:0,7,475	0/0:11,0:10:26.87:0,27,411	1/1:14,1:18:6.91:164,7,0	0/0:7,0:7:10.38:0,10,173	0/1:14,0:14:3.43:3,0,364	0/1:6,0:5:1.27:1,0,115	0/1:6,0:6:13.42:13,0,164	0/0:10,0:8:6.86:0,7,163	0/0:5,0:5:8.49:0,8,117	0/1:15,0:13:0.99:194,0,1	1/1:15,0:14:7.59:284,8,0	1/1:1,0:1:3:26,3,0	0/0:2,0:1:3.01:0,3,52	1/1:7,1:9:21.26:203,21,0	0/1:9,0:8:12.92:49,0,13	1/1:19,0:19:37.75:463,38,0	0/1:9,0:7:23.89:170,0,24	1/1:11,0:10:10.36:208,10,0	1/1:12,0:8:19.90:325,20,0
chr10	40182737	.	TA	T	1251.56	PASS	AB=0.767;AC=29;AF=0.518;AN=56;BaseQRankSum=2.160;DP=423;FS=2.158;HRun=15;HaplotypeScore=82.8682;InbreedingCoeff=0.6589;MQ=67.40;MQ0=0;MQRankSum=1.337;QD=5.88;ReadPosRankSum=2.545;VQSLOD=3.0160;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:13,2:15:5:0,5,138	0/1:4,6:12:1.59:102,0,2	0/0:28,0:16:5.06:0,5,96	0/1:20,0:17:23.35:23,0,43	1/1:10,10:20:3.08:143,3,0	1/1:10,0:22:19.01:61,19,0	1/1:4,1:10:11.07:43,11,0	0/0:17,0:17:29.97:0,30,257	1/1:0,0:5:8.15:23,8,0	1/1:11,7:18:19.82:122,20,0	0/1:8,5:13:16.84:94,0,17	1/1:2,1:14:19.18:66,19,0	0/0:5,0:5:8.94:0,9,68	0/0:9,0:9:17.91:0,18,144	1/1:3,8:11:20.62:134,21,0	1/1:3,5:8:14.72:96,15,0	1/1:4,16:20:44.18:288,44,0	1/1:3,9:12:0.25:127,0,0	0/0:11,0:11:14.95:0,15,121	0/0:20,0:22:32.65:0,33,246	0/0:4,0:4:8.95:0,9,72	1/1:2,2:4:5.89:38,6,0	1/1:3,0:12:18.29:53,18,0	1/1:4,0:11:11.06:41,11,0	0/0:31,2:33:39.02:0,39,453	0/0:22,3:27:12.16:0,12,330	0/0:17,1:18:22.48:0,22,294	0/0:19,2:21:28.33:0,28,356
chr10	40183016	.	A	AT	10066.55	PASS	AB=0.941;AC=29;AF=0.518;AN=56;BaseQRankSum=-15.201;DP=687;FS=15.151;HRun=8;HaplotypeScore=83.3405;InbreedingCoeff=0.9617;MQ=72.87;MQ0=1;MQRankSum=-2.832;QD=26.28;ReadPosRankSum=0.990;VQSLOD=3.9731;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:84.02:0,84,768	0/0:9,0:9:27.01:0,27,247	0/0:24,0:22:38.83:0,39,385	0/1:14,0:16:0.57:1,0,215	0/0:28,0:28:66.01:0,66,603	1/1:2,21:23:60.18:692,60,0	1/1:5,22:27:38.76:690,39,0	1/1:7,21:29:66.03:741,66,0	1/1:2,26:28:69.20:796,69,0	0/0:27,0:27:69.03:0,69,631	0/0:13,0:13:36.02:0,36,329	1/1:3,22:25:63.19:727,63,0	0/0:28,0:28:78.04:0,78,714	0/0:22,0:22:63.03:0,63,576	0/0:32,0:32:87.05:0,87,796	0/0:26,0:26:78.03:0,78,709	0/0:28,0:28:75:0,75,674	0/0:18,0:17:48.02:0,48,439	1/1:1,18:19:54.12:600,54,0	1/1:1,17:18:51.15:588,51,0	1/1:3,41:44:99:1142,99,0	0/0:16,0:16:44.06:0,44,390	1/1:3,12:16:35.94:391,36,0	1/1:5,27:33:72.05:811,72,0	1/1:5,17:22:42.12:481,42,0	1/1:6,28:34:56.89:908,57,0	1/1:0,21:22:60.01:672,60,0	1/1:1,26:27:72.21:828,72,0
chr10	40183185	.	GCAAGTGCTGATTTAAC	G	7784.10	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=11.600;DP=624;FS=1.103;HRun=0;HaplotypeScore=267.5745;InbreedingCoeff=0.9920;MQ=86.24;MQ0=0;MQRankSum=-11.811;QD=73.43;ReadPosRankSum=3.905;VQSLOD=4.4332;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,117,8029	0/0:9,0:8:24.08:0,24,1869	0/0:30,0:30:79.15:0,79,5195	0/0:23,0:22:66.23:0,66,4308	0/0:22,0:22:63.22:0,63,4743	1/1:2,13:15:30.10:1419,30,0	1/1:12,12:24:27.09:1277,27,0	0/0:42,0:42:99:0,120,8765	1/1:3,12:15:21.07:993,21,0	0/0:21,0:21:63.22:0,63,4913	0/0:17,0:17:51.16:0,51,3276	1/1:3,14:17:36.12:1703,36,0	0/0:29,0:29:81.28:0,81,6154	0/0:22,0:22:63.22:0,63,4261	0/0:29,0:29:84.26:0,84,5806	0/0:25,0:24:72.25:0,72,5696	0/0:19,0:19:51.18:0,51,3866	0/0:19,0:19:51.17:0,51,3525	0/0:19,0:19:54.19:0,54,3526	0/0:22,0:22:60.17:0,60,4386	0/0:28,0:28:84.29:0,84,6258	0/0:21,0:21:60.21:0,60,4476	1/1:3,19:22:38.68:1843,39,0	1/1:3,10:13:11.99:549,12,0	0/0:16,0:16:48.16:0,48,3648	0/0:24,0:24:72.25:0,72,5122	0/0:32,0:32:96.32:0,96,7170	0/0:10,0:10:30.10:0,30,2213
chr10	40183483	.	GT	G	997.63	PASS	AB=0.987;AC=15;AF=0.268;AN=56;BaseQRankSum=-3.842;DP=541;FS=5.951;HRun=11;HaplotypeScore=117.3677;InbreedingCoeff=0.7245;MQ=70.77;MQ0=2;MQRankSum=4.864;QD=5.70;ReadPosRankSum=1.707;VQSLOD=1.9692;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:17:25.54:0,26,124	0/0:6,0:13:31.29:0,31,162	0/0:33,1:15:18.26:0,18,145	0/1:23,0:14:22.39:22,0,60	0/0:11,0:21:52.59:0,53,281	1/1:6,15:21:21.21:212,21,0	1/1:4,9:12:5.84:49,6,0	0/0:34,0:34:51.88:0,52,401	1/1:8,5:14:25.97:202,26,0	0/0:9,0:17:42.64:0,43,295	0/0:10,0:18:31.51:0,32,174	1/1:13,3:16:32.15:256,32,0	0/0:8,0:21:20.59:0,21,142	0/0:11,0:13:31.60:0,32,214	0/0:13,0:21:49.34:0,49,267	0/0:13,0:21:47.23:0,47,252	0/0:20,0:23:23.53:0,24,107	0/0:14,0:16:32.63:0,33,176	0/0:26,0:26:41.09:0,41,415	0/1:25,0:26:0.06:0,0,345	0/0:9,0:9:23.86:0,24,224	0/0:10,0:19:38:0,38,203	1/1:12,1:13:19.48:151,19,0	1/1:10,8:19:18.73:281,19,0	0/0:17,0:17:40.64:0,41,407	0/0:14,0:14:2.90:0,3,224	0/1:28,0:28:7.13:7,0,371	0/0:10,0:10:24.48:0,24,233
chr10	40183494	.	TG	T	1196.57	PASS	AB=0.988;AC=32;AF=0.571;AN=56;BaseQRankSum=3.128;DP=572;FS=1.211;HRun=1;HaplotypeScore=109.4942;InbreedingCoeff=-0.2255;MQ=68.63;MQ0=4;MQRankSum=-1.664;QD=2.56;ReadPosRankSum=1.740;VQSLOD=-0.3338;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:21,0:21:60.01:60,0,68	1/1:11,0:10:2.49:38,2,0	0/0:43,1:17:15:0,15,111	0/1:27,1:15:32.45:32,0,42	0/1:22,1:23:24.59:39,0,25	1/1:23,0:23:20.24:123,20,0	1/1:10,1:10:2.52:19,3,0	0/1:29,0:29:99:203,0,129	1/1:20,0:20:4.38:51,4,0	0/1:18,0:18:19.49:19,0,109	0/1:20,0:20:42.80:43,0,43	1/1:14,0:14:32.80:142,33,0	0/1:18,0:18:5.47:5,0,76	0/1:11,1:12:15.29:15,0,126	0/1:22,0:22:47.33:60,0,47	0/1:21,1:22:30.77:43,0,31	1/1:17,2:18:17.52:99,18,0	0/1:18,0:18:54.71:55,0,87	0/1:23,0:23:10.42:10,0,192	0/1:23,0:23:22.34:22,0,112	0/1:13,0:13:45.44:45,0,113	0/1:21,0:21:10.56:44,0,11	1/1:14,0:14:16.28:76,16,0	1/1:26,0:25:28.86:115,29,0	0/0:23,0:23:30.36:0,30,251	0/0:14,0:14:3.59:0,4,193	0/0:23,0:23:1.76:0,2,186	0/1:19,0:18:2.12:2,0,88
chr10	40183495	.	GT	G	1182.85	PASS	AB=0.847;AC=29;AF=0.518;AN=56;BaseQRankSum=-5.951;DP=568;FS=2.856;HRun=15;HaplotypeScore=108.4415;InbreedingCoeff=-0.0841;MQ=67.90;MQ0=4;MQRankSum=6.298;QD=2.66;ReadPosRankSum=-3.057;VQSLOD=0.0244;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:20,1:21:42.67:43,0,130	0/0:11,0:10:20.80:0,21,89	0/0:42,0:16:6.26:0,6,40	0/1:27,0:15:10.50:12,0,11	0/1:21,1:22:0.12:0,0,101	1/1:13,7:23:34.21:192,34,0	0/1:9,2:10:10.10:17,0,10	0/1:24,3:28:30.44:44,0,30	0/1:7,12:20:8.23:79,0,8	0/1:16,2:18:30.96:31,0,54	0/1:15,4:19:55.65:56,0,63	1/1:12,2:14:4.85:61,5,0	0/0:17,0:18:16.94:0,17,118	0/0:12,0:12:23.12:0,23,176	0/0:20,2:22:5.46:0,5,148	0/1:20,2:22:35.43:35,0,111	0/1:18,1:18:27.13:33,0,27	0/0:16,2:18:4.30:0,4,121	0/1:14,9:23:40.26:121,0,40	0/1:14,9:23:2.43:102,0,2	1/1:11,2:13:18.92:109,19,0	0/1:18,3:21:44.40:44,0,55	1/1:7,7:14:10.93:65,11,0	1/1:10,13:25:23.68:131,24,0	0/1:14,8:23:40.68:41,0,59	0/1:12,1:14:36.30:36,0,37	1/1:21,2:23:4.24:33,4,0	1/1:6,11:18:12.66:69,13,0
chr10	40183499	.	T	TG	1430.88	PASS	AB=0.757;AC=14;AF=0.250;AN=56;BaseQRankSum=11.259;DP=564;FS=17.688;HRun=0;HaplotypeScore=107.6093;InbreedingCoeff=0.5836;MQ=67.22;MQ0=4;MQRankSum=-8.777;QD=8.08;ReadPosRankSum=3.771;VQSLOD=2.2906;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:53.51:0,54,474	0/1:6,6:11:22.11:95,0,22	0/0:41,0:14:3.80:0,4,97	0/0:28,0:15:17.47:0,17,131	1/1:14,9:23:27.88:252,28,0	0/0:22,0:22:56.83:0,57,465	0/0:11,0:10:20.84:0,21,170	0/0:27,0:27:62.87:0,63,538	0/0:19,0:19:36.01:0,36,333	1/1:15,4:19:14.83:186,15,0	1/1:13,7:20:32.76:249,33,0	0/0:13,0:13:38.83:0,39,336	0/0:19,0:19:22.95:0,23,243	0/0:11,0:11:31.68:0,32,316	0/1:16,7:23:43.18:167,0,43	1/1:18,3:21:11:181,11,0	0/1:19,2:20:19.72:87,0,20	0/1:9,8:17:47.86:183,0,48	0/0:22,0:22:65.96:0,66,602	0/0:23,0:23:65.30:0,65,516	0/0:13,0:13:38.70:0,39,334	1/1:17,4:21:35.15:214,35,0	0/0:13,0:13:26.98:0,27,233	0/0:25,0:24:42.46:0,42,364	0/0:24,0:24:57:0,57,544	0/0:14,0:14:42.04:0,42,408	0/0:23,0:23:62.84:0,63,520	0/0:18,0:17:26.98:0,27,231
chr10	40183501	.	T	TTTG	2300.29	PASS	AB=0.803;AC=12;AF=0.214;AN=56;BaseQRankSum=6.323;DP=564;FS=10.794;HRun=0;HaplotypeScore=123.8996;InbreedingCoeff=0.4278;MQ=66.42;MQ0=4;MQRankSum=-5.893;QD=12.78;ReadPosRankSum=3.362;VQSLOD=3.0012;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:44.94:0,45,482	1/1:6,6:12:21.85:308,22,0	0/0:41,0:14:8.59:0,9,70	0/0:27,0:14:21.72:0,22,166	0/1:13,9:23:2.67:293,0,3	0/0:22,0:22:56.96:0,57,560	0/0:11,0:10:20.88:0,21,186	0/0:26,0:26:59.88:0,60,544	0/0:19,0:19:30.05:0,30,336	0/1:14,4:19:10.87:258,0,11	1/1:14,7:21:25.68:398,26,0	0/0:13,0:13:37.82:0,38,348	0/0:19,0:19:28:0,28,261	0/0:11,0:11:30.40:0,30,362	0/1:16,7:23:81.58:315,0,82	0/1:17,3:21:51.55:167,0,52	0/1:19,2:21:7.64:166,0,8	1/1:10,7:17:13.42:344,13,0	0/0:23,0:23:66.01:0,66,670	0/0:23,0:23:65.79:0,66,604	0/0:13,0:13:38.88:0,39,365	0/1:17,4:21:19.74:218,0,20	0/0:14,0:14:29.94:0,30,272	0/0:25,0:24:44.71:0,45,456	0/0:24,0:24:53.98:0,54,554	0/0:14,0:14:38.80:0,39,394	0/0:22,0:22:59.71:0,60,493	0/0:18,0:17:30.04:0,30,299
chr10	40186601	.	TAA	T	6532.07	PASS	AB=0.611;AC=45;AF=0.804;AN=56;BaseQRankSum=-5.733;DP=636;FS=6.541;HRun=16;HaplotypeScore=94.2802;InbreedingCoeff=0.6827;MQ=77.44;MQ0=1;MQRankSum=-0.144;QD=12.10;ReadPosRankSum=4.596;VQSLOD=4.0404;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,2:33:17.98:0,18,324	1/1:2,1:3:5.96:50,6,0	0/0:28,0:24:17.96:0,18,313	0/0:20,0:16:8.55:0,9,55	0/1:9,23:34:1.78:330,0,2	1/1:6,0:27:14.98:128,15,0	1/1:2,1:19:33.11:154,33,0	1/1:7,14:21:19.33:299,19,0	1/1:2,0:17:35.66:153,36,0	1/1:5,18:25:44.77:456,45,0	1/1:6,19:26:39.11:368,39,0	1/1:5,12:17:45.36:352,45,0	0/1:8,0:15:8.47:8,0,42	0/0:10,0:13:25.56:0,26,182	1/1:5,13:19:29.59:237,30,0	1/1:1,15:16:15.72:300,16,0	1/1:11,19:31:46.66:347,47,0	1/1:5,18:25:44.39:349,44,0	1/1:9,12:26:26.02:306,26,0	1/1:3,19:26:47.45:383,47,0	1/1:6,15:23:29.33:266,29,0	1/1:9,9:20:26.98:254,27,0	0/1:7,18:27:1.04:256,0,1	1/1:8,14:22:47.64:388,48,0	1/1:6,22:29:35.78:341,36,0	1/1:10,14:26:28.54:310,29,0	1/1:6,16:25:5.92:258,6,0	1/1:7,10:19:11.59:240,12,0
chr10	40187203	.	A	AGTGTGT	2270.42	PASS	AB=0.986;AC=27;AF=0.540;AN=50;BaseQRankSum=-2.020;DP=646;FS=9.154;HRun=0;HaplotypeScore=146.8298;InbreedingCoeff=0.4903;MQ=56.82;MQ0=20;MQRankSum=-1.629;QD=7.03;ReadPosRankSum=0.561;VQSLOD=1.9962;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:35:5.67:0,6,66	0/0:10,0:11:6.86:0,7,82	./.	./.	1/1:18,0:18:8:284,8,0	1/1:24,0:25:14.62:220,15,0	1/1:17,0:22:5.27:74,5,0	./.	1/1:16,0:24:9.02:115,9,0	0/1:23,0:21:13.53:87,0,14	1/1:15,0:15:3.01:49,3,0	0/0:15,0:24:9.14:0,9,114	1/1:20,4:26:15.05:394,15,0	1/1:10,5:16:12.04:325,12,0	1/1:15,5:24:8.67:207,9,0	1/1:17,7:28:14.10:398,14,0	1/1:10,4:17:3.01:96,3,0	0/1:7,0:7:14.13:14,0,17	0/0:23,0:23:0.64:0,1,49	0/0:26,0:26:18.04:0,18,302	0/0:36,0:37:18.52:0,19,334	1/1:12,0:12:6.01:87,6,0	0/0:27,0:25:4.83:0,5,64	0/1:42,0:43:48.57:81,0,49	1/1:10,0:16:0.27:13,0,0	0/0:21,0:21:12.56:0,13,245	0/0:21,0:22:18.06:0,18,326	0/0:11,0:12:12.04:0,12,192
chr10	40187247	.	T	TGTGTGT	1922.32	PASS	AB=1.000;AC=28;AF=0.538;AN=52;BaseQRankSum=-1.542;DP=541;FS=9.903;HRun=0;HaplotypeScore=130.5907;InbreedingCoeff=0.4535;MQ=67.61;MQ0=15;MQRankSum=-2.446;QD=6.05;ReadPosRankSum=-4.281;VQSLOD=-0.2891;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:5.67:0,6,66	0/0:11,0:10:6.86:0,7,82	0/1:28,0:20:0.01:0,0,0	./.	1/1:14,6:22:2.32:94,2,0	1/1:21,0:21:14.64:220,15,0	1/1:16,0:15:2.26:37,2,0	./.	1/1:19,0:19:9.03:115,9,0	0/1:23,0:22:13.53:87,0,14	1/1:14,0:14:3:49,3,0	0/0:21,0:21:9.14:0,9,114	1/1:21,0:21:11.78:339,12,0	1/1:13,0:12:12.04:325,12,0	1/1:20,0:20:8.94:207,9,0	1/1:25,0:25:14.06:325,14,0	1/1:14,0:14:3.01:96,3,0	0/1:9,0:9:14.13:14,0,17	0/0:10,0:10:1.17:0,1,49	0/0:17,0:17:17.97:0,18,301	0/0:28,0:28:18.05:0,18,333	1/1:17,0:17:5.98:87,6,0	0/0:20,0:19:3.88:0,4,63	0/1:36,0:34:20.19:84,0,20	1/1:20,0:20:0.27:13,0,0	0/0:21,0:21:12.68:0,13,245	0/0:18,0:18:18.06:0,18,326	0/0:14,0:13:12.04:0,12,192
chr10	40189846	.	GTTTCTTCTTCCTCTTCTTTTTTTTTGTTTTTT	G	23279.99	PASS	AB=1.000;AC=48;AF=0.857;AN=56;BaseQRankSum=-1.908;DP=471;FS=9.403;HRun=0;HaplotypeScore=359.5160;InbreedingCoeff=0.5254;MQ=67.62;MQ0=2;MQRankSum=-4.740;QD=55.17;ReadPosRankSum=5.215;VQSLOD=2.1551;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:17,0:16:9.05:329,0,9	1/1:2,10:12:15.04:1213,15,0	0/0:20,0:16:24.08:0,24,787	0/0:18,0:12:19.13:0,19,661	1/1:8,10:18:24.07:1397,24,0	1/1:9,13:22:24.06:1841,24,0	1/1:9,0:9:2.99:189,3,0	1/1:36,0:36:2.93:77,3,0	1/1:3,9:12:15.05:1193,15,0	1/1:10,10:20:27.04:1442,27,0	1/1:10,7:17:12.02:909,12,0	1/1:11,6:17:9.01:721,9,0	1/1:11,9:20:21.05:1627,21,0	1/1:5,6:11:12.02:937,12,0	1/1:9,8:17:12.01:964,12,0	1/1:9,4:13:6.01:482,6,0	0/0:10,0:10:2.88:0,3,15	1/1:8,3:11:2.99:154,3,0	1/1:17,0:17:6:77,6,0	1/1:12,17:29:30.05:1999,30,0	0/1:11,0:11:0:0,0,0	1/1:14,9:23:18.02:1459,18,0	1/1:4,6:10:5.18:485,5,0	1/1:7,8:15:9.02:714,9,0	1/1:10,6:16:12.01:911,12,0	1/1:8,5:13:15.04:1084,15,0	1/1:12,9:21:21.06:1615,21,0	1/1:9,6:15:18.04:1458,18,0
chr10	40189862	.	CTTTTTTTTTGTTTT	C	10028.80	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=6.774;DP=411;FS=0.830;HRun=0;HaplotypeScore=219.5333;InbreedingCoeff=0.5944;MQ=67.54;MQ0=7;MQRankSum=-6.195;QD=31.54;ReadPosRankSum=7.374;VQSLOD=3.6253;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,4:13:9.01:227,9,0	1/1:11,0:11:15.04:500,15,0	0/0:41,0:16:35.11:0,35,1023	0/0:38,0:19:37.63:0,38,1009	1/1:15,0:15:21.02:569,21,0	1/1:18,0:18:24.06:774,24,0	1/1:6,2:8:2.99:115,3,0	1/1:22,0:22:2.93:49,3,0	1/1:10,0:10:15.05:492,15,0	1/1:17,0:17:18.74:564,19,0	1/1:13,0:13:12.02:404,12,0	1/1:14,0:14:9.01:307,9,0	1/1:14,0:14:21.05:741,21,0	1/1:11,0:11:12.02:390,12,0	1/1:16,0:16:12.01:403,12,0	1/1:6,0:6:6.01:208,6,0	0/0:7,0:7:2.74:0,3,12	1/1:7,0:7:2.99:118,3,0	1/1:7,0:7:5.65:35,6,0	1/1:28,0:28:26.99:852,27,0	0/0:7,0:7:0:0,0,0	1/1:18,0:18:18.02:578,18,0	1/1:10,0:10:5.34:192,5,0	1/1:13,0:13:8.65:303,9,0	1/1:12,0:12:12.01:414,12,0	1/1:8,0:8:15.04:503,15,0	1/1:14,0:14:21.06:714,21,0	1/1:13,0:13:18.04:578,18,0
chr10	40189867	.	T	TCC	1074.94	PASS	AB=1.000;AC=26;AF=0.481;AN=54;BaseQRankSum=-3.783;DP=271;FS=7.033;HRun=0;HaplotypeScore=158.6038;InbreedingCoeff=-0.3004;MQ=82.29;MQ0=7;MQRankSum=-0.821;QD=6.94;ReadPosRankSum=4.321;VQSLOD=2.4169;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,0:5:5.40:84,5,0	0/1:10,0:10:21.59:22,0,28	0/0:47,0:17:41.22:0,41,441	0/0:43,0:22:27.82:0,28,416	0/1:10,0:10:20.86:91,0,21	0/1:13,0:13:54.02:54,0,65	1/1:2,0:2:3.01:34,3,0	1/1:4,0:4:3:52,3,0	0/1:9,0:9:21.68:22,0,32	0/1:10,0:10:8.85:172,0,9	0/1:7,0:7:9.02:29,0,9	0/1:6,0:6:20.07:29,0,20	0/1:9,0:9:10.86:121,0,11	0/1:6,0:6:22.53:23,0,29	0/1:8,0:8:26.22:26,0,32	0/1:4,0:4:9.41:27,0,9	0/0:1,0:1:2.88:0,3,15	1/1:4,0:4:3.01:35,3,0	1/1:2,0:2:6.02:77,6,0	0/1:17,0:17:50.85:98,0,51	./.	0/0:9,0:9:16.34:0,16,73	0/0:6,0:6:5.37:0,5,25	0/1:8,0:8:21.63:29,0,22	0/1:6,0:6:17.33:55,0,17	0/1:5,0:5:14.18:57,0,14	0/1:9,0:9:25.27:97,0,25	0/0:6,0:6:15.86:0,16,79
chr10	40189991	.	TTTCTCCTTCTCCTTCTCC	T	816.33	PASS	AB=1.000;AC=18;AF=0.600;AN=30;BaseQRankSum=1.713;DP=607;FS=16.384;HRun=0;HaplotypeScore=301.2985;InbreedingCoeff=0.3099;MQ=53.23;MQ0=17;MQRankSum=3.243;QD=3.76;ReadPosRankSum=-0.241;VQSLOD=0.4626;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:15.62:0,16,415	./.	./.	./.	1/1:12,8:20:8.99:122,9,0	0/0:19,0:19:1.08:0,1,2	./.	./.	1/1:15,0:15:0.47:1,0,0	1/1:22,8:30:24.06:445,24,0	./.	./.	0/0:25,0:25:5.42:0,5,217	0/0:17,0:16:6.02:0,6,75	1/1:18,0:18:3.01:51,3,0	1/1:22,0:22:6.02:133,6,0	0/1:19,0:19:31.17:91,0,31	0/1:31,0:30:14.99:16,0,15	./.	./.	0/0:15,0:15:0.89:0,1,2	1/1:21,5:23:2.97:20,3,0	1/1:15,0:15:3:31,3,0	1/1:21,0:21:2.92:17,3,0	./.	./.	./.	./.
chr10	40190161	.	A	AAC	19858.57	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-19.025;DP=772;FS=12.884;HRun=0;HaplotypeScore=81.8203;InbreedingCoeff=0.9964;MQ=72.81;MQ0=3;MQRankSum=-1.805;QD=49.28;ReadPosRankSum=1.137;VQSLOD=5.1409;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,147,2242	0/0:11,0:11:33.08:0,33,480	0/0:13,0:13:36.10:0,36,507	0/0:14,0:14:42.09:0,42,582	0/0:28,0:28:81.23:0,81,1209	1/1:0,25:25:63.22:1216,63,0	1/1:1,31:33:87.30:1678,87,0	1/1:1,37:38:99:2055,111,0	1/1:0,26:26:69.24:1332,69,0	0/0:23,0:23:69.23:0,69,1053	0/0:24,0:24:66.22:0,66,1007	1/1:1,38:40:90.31:1738,90,0	0/0:26,0:26:78.26:0,78,1186	0/0:26,0:26:78.26:0,78,1174	0/0:29,0:29:84.29:0,84,1286	0/0:34,1:34:47.39:0,47,1483	0/0:36,0:36:99:0,108,1600	0/0:23,0:23:69.23:0,69,1051	1/1:0,20:21:63.19:1162,63,0	1/1:2,36:39:99:1948,102,0	1/1:2,35:35:93.32:1773,93,0	0/0:32,0:32:93.25:0,93,1346	1/1:2,15:18:45.15:869,45,0	1/1:2,28:30:54.57:1427,55,0	1/1:2,31:33:84.29:1622,84,0	1/1:3,21:23:17.21:1073,17,0	1/1:1,31:32:87.06:1677,87,0	1/1:1,5:6:15.05:290,15,0
chr10	40191143	.	GA	G	2857.67	PASS	AB=0.725;AC=48;AF=0.923;AN=52;BaseQRankSum=-4.355;DP=343;FS=19.472;HRun=9;HaplotypeScore=53.2971;InbreedingCoeff=-0.0766;MQ=39.89;MQ0=46;MQRankSum=-1.638;QD=8.36;ReadPosRankSum=4.444;VQSLOD=0.3170;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:15,6:13:7.45:80,7,0	1/1:3,3:6:2.37:8,2,0	./.	./.	1/1:11,12:21:14.25:136,14,0	1/1:12,0:10:14.69:97,15,0	1/1:8,0:5:3.42:23,3,0	1/1:6,10:15:30:274,30,0	1/1:8,0:7:8.78:54,9,0	1/1:2,8:9:24.01:219,24,0	1/1:2,11:12:14.87:136,15,0	1/1:10,0:10:23.69:166,24,0	1/1:7,5:11:7.01:79,7,0	0/1:8,5:12:4.99:115,0,5	0/1:6,7:11:0.46:119,0,0	1/1:4,8:10:23.54:216,24,0	0/1:13,9:14:3.55:91,0,4	0/1:14,4:12:9:46,0,9	1/1:9,5:8:11.99:110,12,0	1/1:3,13:16:1.35:120,1,0	1/1:2,5:6:6:55,6,0	1/1:5,7:12:11.31:108,11,0	1/1:10,0:9:8.93:66,9,0	1/1:11,0:7:9.01:69,9,0	1/1:1,12:13:17.91:154,18,0	1/1:6,10:12:24.01:217,24,0	1/1:6,9:13:11.99:110,12,0	1/1:5,6:7:9:82,9,0
chr10	40191959	.	T	TA	3788.99	PASS	AB=0.923;AC=13;AF=0.232;AN=56;BaseQRankSum=-2.749;DP=656;FS=1.651;HRun=9;HaplotypeScore=81.5877;InbreedingCoeff=0.9416;MQ=70.75;MQ0=0;MQRankSum=-5.590;QD=24.76;ReadPosRankSum=-0.054;VQSLOD=4.0608;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,105,885	0/0:14,0:14:38.98:0,39,336	0/1:11,1:12:0.60:1,0,204	0/0:11,0:11:14.99:0,15,128	0/0:24,0:24:62.97:0,63,547	1/1:2,18:20:57.01:592,57,0	1/1:1,12:13:36.03:383,36,0	0/0:35,0:36:97.99:0,98,834	1/1:6,14:20:45.11:491,45,0	0/0:31,0:31:65.48:0,65,726	0/0:31,0:31:83.06:0,83,727	1/1:9,23:32:90.17:945,90,0	0/0:21,0:21:59.98:0,60,521	0/0:19,0:19:53.99:0,54,469	0/0:19,0:19:44.96:0,45,387	0/0:18,0:18:44.98:0,45,391	0/0:30,0:30:74.97:0,75,651	0/0:21,0:21:53.98:0,54,469	0/0:22,0:23:64.99:0,65,546	0/0:41,0:41:98.86:0,99,846	0/0:19,0:19:47.99:0,48,416	0/0:24,0:24:65.96:0,66,567	1/1:5,20:25:39.15:652,39,0	1/1:7,24:31:26.15:726,26,0	0/0:14,0:14:29.99:0,30,260	0/0:25,0:26:59.02:0,59,501	0/0:25,0:26:61.91:0,62,507	0/0:18,0:18:44.95:0,45,381
chr10	40192020	.	G	GCA	15295.46	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-15.579;DP=678;FS=0.607;HRun=0;HaplotypeScore=84.0869;InbreedingCoeff=0.9998;MQ=77.25;MQ0=1;MQRankSum=-3.878;QD=45.93;ReadPosRankSum=1.958;VQSLOD=6.0714;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,141,2055	0/0:18,0:18:51.16:0,51,732	0/0:23,0:22:48.13:0,48,676	0/0:33,0:33:96.15:0,96,1286	0/0:24,0:24:72.20:0,72,1018	1/1:7,15:21:39.11:688,39,0	1/1:0,12:12:30.10:562,30,0	1/1:5,24:30:81.24:1433,81,0	1/1:1,18:19:51.17:954,51,0	0/0:28,0:28:78.25:0,78,1113	0/0:23,0:23:63.20:0,63,906	1/1:2,31:33:78.20:1421,78,0	0/0:17,0:17:48.16:0,48,707	0/0:26,0:26:75.23:0,75,1064	0/0:14,0:14:39.09:0,39,533	0/0:17,0:17:48.16:0,48,707	0/0:28,0:28:84.27:0,84,1217	0/0:18,0:18:51.17:0,51,751	1/1:1,19:20:57.20:1063,57,0	1/1:0,28:28:66.23:1236,66,0	1/1:2,34:37:99:1854,99,0	0/0:28,0:28:84.26:0,84,1216	1/1:0,17:17:30.10:561,30,0	1/1:2,23:25:51.17:954,51,0	1/1:0,16:16:39.13:731,39,0	1/1:1,24:25:72.23:1314,72,0	1/1:1,38:39:99:1962,105,0	1/1:0,10:10:30.10:562,30,0
chr10	40192679	.	T	TTTC	432.28	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=-0.487;DP=394;FS=3.818;HRun=0;HaplotypeScore=80.6131;InbreedingCoeff=0.3970;MQ=57.17;MQ0=14;MQRankSum=-2.616;QD=5.61;ReadPosRankSum=0.034;VQSLOD=1.7980;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:5,16:25:1.22:296,1,0	0/0:5,0:4:6.79:0,7,39	0/0:24,0:11:32.50:0,33,247	0/0:20,0:9:8.97:0,9,81	0/0:19,0:18:0.36:0,0,103	0/0:13,0:13:7.47:0,7,140	0/0:8,0:8:15.94:0,16,149	0/0:34,0:33:41.21:0,41,360	0/0:8,0:8:12.75:0,13,108	0/0:21,0:21:15.07:0,15,296	0/1:8,0:6:0.48:0,0,111	0/0:9,0:9:19.86:0,20,142	1/1:3,6:10:5.90:94,6,0	1/1:13,0:13:18.12:156,18,0	0/0:7,0:7:12.10:0,12,157	0/0:13,0:13:27.26:0,27,273	0/0:18,0:17:38.54:0,39,459	0/0:21,0:18:35.97:0,36,438	0/0:19,0:18:7.49:0,7,194	0/1:11,0:11:3.05:3,0,115	0/1:10,0:10:5.84:6,0,67	0/0:8,0:8:5.98:0,6,52	0/0:14,0:13:20.95:0,21,148	0/0:12,0:12:7.20:0,7,104	0/0:12,0:12:9.64:0,10,60	0/0:16,0:15:20.49:0,20,239	0/0:8,0:8:7.54:0,8,64	0/0:8,0:6:5.48:0,5,26
chr10	40192833	.	A	ATATG	800.07	PASS	AB=0.952;AC=10;AF=0.238;AN=42;BaseQRankSum=-4.597;DP=163;FS=3.466;HRun=0;HaplotypeScore=60.1661;InbreedingCoeff=-0.1330;MQ=43.75;MQ0=2;MQRankSum=-2.203;QD=12.70;ReadPosRankSum=0.704;VQSLOD=2.5503;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:9:0,9,117	0/0:4,0:4:3.01:0,3,64	./.	./.	0/0:11,0:11:0:0,0,0	0/0:13,0:13:9.89:0,10,44	0/0:5,0:5:4.20:0,4,15	0/1:21,0:18:99:418,0,111	./.	0/0:4,0:4:5.98:0,6,103	0/0:2,0:2:3.01:0,3,42	1/1:1,0:1:0.47:1,0,0	./.	0/0:4,0:4:5.99:0,6,48	./.	0/0:5,0:5:9.03:0,9,124	0/0:9,0:9:18.85:0,19,231	0/0:10,0:10:1.38:0,1,121	0/1:4,0:4:33.47:127,0,33	0/1:8,0:8:7.90:8,0,143	./.	./.	0/1:2,0:2:2.89:5,0,3	0/1:6,0:6:12.38:12,0,31	0/1:8,0:9:5.74:134,0,6	0/0:5,0:5:14.16:0,14,117	0/1:7,0:6:42.96:114,0,43	0/1:3,2:5:14.77:92,0,15
chr10	40192839	.	ATATATG	A	902.27	PASS	AB=1.000;AC=16;AF=0.400;AN=40;BaseQRankSum=-3.043;DP=167;FS=5.249;HRun=0;HaplotypeScore=69.6084;InbreedingCoeff=0.4069;MQ=42.59;MQ0=2;MQRankSum=-1.410;QD=15.04;ReadPosRankSum=1.683;VQSLOD=2.1308;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:8,0:8:18.97:43,0,19	1/1:2,2:4:3.01:74,3,0	0/0:6,0:1:0:0,0,0	./.	./.	0/0:13,0:13:12.88:0,13,113	0/0:3,0:5:6.01:0,6,78	0/0:20,0:17:48.09:0,48,661	0/0:3,0:3:0:0,0,0	1/1:1,2:4:12.04:229,12,0	1/1:1,1:2:3.01:46,3,0	./.	./.	./.	./.	1/1:3,2:5:9.03:143,9,0	1/1:6,3:9:15.44:187,15,0	1/1:6,3:9:14.81:218,15,0	0/1:10,0:10:9.81:10,0,284	0/0:9,0:9:21.05:0,21,307	./.	./.	0/1:3,0:3:20.21:65,0,20	0/0:6,0:6:18.03:0,18,359	0/0:9,0:9:12.03:0,12,165	0/1:6,0:6:33.17:33,0,155	0/0:7,0:6:18.04:0,18,305	0/0:6,0:6:15.02:0,15,180
chr10	40192841	.	ATATGTG	A	547.01	PASS	AB=1.000;AC=16;AF=0.400;AN=40;BaseQRankSum=-2.749;DP=159;FS=11.947;HRun=0;HaplotypeScore=69.0803;InbreedingCoeff=0.5673;MQ=42.45;MQ0=2;MQRankSum=-0.835;QD=11.16;ReadPosRankSum=1.841;VQSLOD=0.9093;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:6,2:8:3.01:74,3,0	1/1:4,0:4:3.01:49,3,0	0/0:6,0:1:0:0,0,0	./.	./.	0/0:13,0:13:12.72:0,13,109	0/0:5,0:5:6:0,6,102	0/0:17,0:15:44.99:0,45,660	0/0:3,0:3:0:0,0,0	1/1:4,0:4:12.04:182,12,0	1/1:2,0:2:2.99:23,3,0	./.	./.	./.	./.	1/1:5,0:5:8.97:69,9,0	1/1:8,0:8:13.56:108,14,0	1/1:9,0:9:10.97:142,11,0	0/0:10,0:10:12.01:0,12,445	0/0:8,0:8:21.07:0,21,472	./.	./.	0/1:3,0:3:18.47:40,0,18	0/0:6,0:6:18.06:0,18,499	0/0:8,0:8:11.99:0,12,143	0/1:6,0:6:7.22:7,0,200	0/0:7,0:6:18.06:0,18,379	0/0:6,0:6:15.02:0,15,262
chr10	40192843	.	A	ATGTGTGTG	200.07	PASS	AB=0.982;AC=13;AF=0.361;AN=36;BaseQRankSum=-0.491;DP=163;FS=4.847;HRun=0;HaplotypeScore=77.1832;InbreedingCoeff=0.0249;MQ=42.10;MQ0=1;MQRankSum=0.542;QD=2.15;ReadPosRankSum=-4.536;VQSLOD=0.0549;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:2.91:0,3,41	0/0:4,0:4:3.01:0,3,48	0/1:5,0:1:0:0,0,0	./.	0/1:11,0:11:0:0,0,0	1/1:5,8:13:0.88:2,1,0	1/1:5,0:5:3.48:46,3,0	0/1:20,0:18:74.63:79,0,75	./.	0/0:4,0:4:12.04:0,12,188	./.	./.	./.	./.	./.	./.	0/0:8,0:8:4.51:0,5,24	0/0:9,0:9:10.95:0,11,92	0/1:10,0:10:4.87:5,0,70	0/1:9,0:8:31.86:32,0,93	./.	./.	0/0:3,0:3:3.01:0,3,58	0/0:6,0:6:18.06:0,18,465	1/1:6,0:7:1.46:3,1,0	0/0:5,0:5:8.75:0,9,65	0/1:6,0:6:32.87:114,0,33	0/1:6,0:6:23.74:24,0,48
chr10	40192861	.	G	GCATA	363.61	PASS	AB=0.821;AC=6;AF=0.136;AN=44;BaseQRankSum=1.069;DP=171;FS=2.738;HRun=0;HaplotypeScore=60.5389;InbreedingCoeff=0.2993;MQ=42.70;MQ0=1;MQRankSum=-2.791;QD=13.47;ReadPosRankSum=-0.639;VQSLOD=2.9282;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:2.22:0,2,7	1/1:5,0:5:2.98:21,3,0	0/0:5,0:1:0:0,0,0	./.	0/0:8,0:8:0:0,0,0	0/0:11,0:11:5.97:0,6,107	0/0:5,0:5:6.07:0,6,48	0/0:25,0:17:44.77:0,45,535	0/0:3,0:3:0:0,0,0	0/1:5,0:5:29.90:98,0,30	./.	0/0:1,0:1:2.99:0,3,24	0/0:3,0:3:2.50:0,2,9	0/0:4,0:4:4.99:0,5,17	./.	./.	1/1:8,0:8:8.98:141,9,0	0/1:4,5:9:22.95:210,0,23	0/0:8,0:8:24.01:0,24,298	0/0:10,0:9:23.07:0,23,294	./.	./.	0/0:2,0:2:3.01:0,3,45	0/0:8,0:8:24.08:0,24,499	0/0:5,0:5:3:0,3,25	0/0:6,0:6:15.02:0,15,167	0/0:7,0:6:10.39:0,10,117	0/0:5,0:5:12:0,12,124
chr10	40192864	.	C	CAT	1262.77	PASS	AB=0.884;AC=32;AF=0.667;AN=48;BaseQRankSum=2.306;DP=172;FS=0.000;HRun=0;HaplotypeScore=53.8574;InbreedingCoeff=0.4125;MQ=47.45;MQ0=1;MQRankSum=-1.870;QD=10.02;ReadPosRankSum=0.271;VQSLOD=2.7618;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:2,13:15:0.01:0,0,0	1/1:3,0:4:2.04:6,2,0	0/0:6,0:2:2.80:0,3,13	./.	./.	0/0:10,0:10:8.56:0,9,99	0/0:4,0:4:2.77:0,3,37	1/1:24,0:16:29.50:288,30,0	0/1:3,0:3:0:0,0,0	1/1:6,0:6:10.99:76,11,0	1/1:1,0:3:2.04:6,2,0	0/0:1,0:1:3.01:0,3,38	1/1:2,1:3:3.01:50,3,0	1/1:2,2:4:6.02:99,6,0	1/1:0,0:1:2.04:6,2,0	1/1:3,0:4:2.04:6,2,0	1/1:5,0:11:5.98:46,6,0	1/1:8,0:9:7.78:48,8,0	1/1:8,0:8:17.99:163,18,0	0/1:10,0:9:5.13:195,0,5	./.	./.	0/0:2,0:2:3.01:0,3,37	0/0:9,0:9:21.03:0,21,235	1/1:5,0:5:3.01:34,3,0	1/1:6,0:6:14.98:143,15,0	0/1:5,0:5:28.07:79,0,28	1/1:5,0:5:15.04:157,15,0
chr10	40192876	.	T	TAC	2352.53	PASS	AB=1.000;AC=24;AF=0.480;AN=50;BaseQRankSum=0.564;DP=187;FS=1.975;HRun=0;HaplotypeScore=44.8329;InbreedingCoeff=0.5267;MQ=55.45;MQ0=1;MQRankSum=-0.780;QD=23.29;ReadPosRankSum=1.103;VQSLOD=3.9283;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:11.67:0,12,93	1/1:3,0:3:2.04:6,2,0	0/0:8,0:3:2.58:0,3,28	./.	0/0:6,0:6:2.99:0,3,24	0/0:9,0:9:8.74:0,9,127	0/0:5,0:5:8.76:0,9,91	1/1:1,27:21:62.91:802,63,0	0/0:4,0:4:2.99:0,3,24	0/0:4,0:4:5.37:0,5,28	0/1:4,0:4:0.48:0,0,20	0/0:1,0:1:3.01:0,3,43	1/1:3,0:3:3:25,3,0	1/1:4,0:4:5.99:49,6,0	0/0:3,0:3:2.05:0,2,44	1/1:3,0:3:2.04:6,2,0	0/1:12,0:12:2.53:3,0,36	0/0:8,0:8:2.17:0,2,35	1/1:0,7:7:21.05:332,21,0	1/1:1,9:9:15.99:376,16,0	./.	./.	0/0:2,0:2:3.01:0,3,43	0/0:7,0:7:21.07:0,21,298	1/1:0,4:4:3.01:55,3,0	1/1:0,10:10:27.03:372,27,0	1/1:4,3:7:7.28:214,7,0	1/1:0,6:6:15.05:274,15,0
chr10	40193900	.	ACAT	A	5484.86	PASS	AB=0.944;AC=29;AF=0.518;AN=56;BaseQRankSum=10.542;DP=489;FS=6.926;HRun=0;HaplotypeScore=73.1657;InbreedingCoeff=0.9111;MQ=71.49;MQ0=2;MQRankSum=-1.796;QD=22.21;ReadPosRankSum=0.552;VQSLOD=3.9291;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:63.67:0,64,1231	0/0:7,0:7:21.07:0,21,425	0/0:26,0:13:21.01:0,21,329	0/0:31,0:23:30.04:0,30,478	0/0:11,0:11:27.09:0,27,533	1/1:0,4:4:6.02:85,6,0	1/1:6,14:20:24.08:342,24,0	1/1:11,13:24:33.10:447,33,0	1/1:6,10:16:27.09:385,27,0	0/1:16,1:17:6.56:7,0,577	0/0:7,0:7:15.04:0,15,266	1/1:5,14:19:36.12:513,36,0	0/0:17,0:16:30.10:0,30,607	0/0:11,0:11:27.09:0,27,546	0/0:23,0:23:48.16:0,48,971	0/0:24,0:24:57.20:0,57,1154	0/0:30,0:30:78.27:0,78,1554	0/0:20,0:20:48.16:0,48,939	1/1:11,11:22:30.10:426,30,0	1/1:5,9:14:18.06:257,18,0	1/1:11,24:35:57.19:812,57,0	0/0:8,0:8:18.06:0,18,349	1/1:1,3:4:9.03:128,9,0	1/1:6,25:31:48.16:684,48,0	1/1:3,8:11:21.07:299,21,0	1/1:2,8:10:21.07:291,21,0	1/1:1,12:13:36.12:510,36,0	1/1:0,7:7:21.07:299,21,0
chr10	40195005	.	A	AT	337.74	PASS	AB=0.667;AC=13;AF=0.542;AN=24;BaseQRankSum=-3.033;DP=174;FS=20.985;HRun=9;HaplotypeScore=29.0091;InbreedingCoeff=0.6102;MQ=72.37;MQ0=79;MQRankSum=-2.117;QD=9.38;ReadPosRankSum=3.601;VQSLOD=0.2577;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:22,0:10:13.14:0,13,86	0/0:28,0:11:12.22:0,12,55	0/0:11,0:11:3:0,3,26	./.	./.	./.	./.	0/0:6,0:4:9:0,9,78	0/0:9,0:9:3:0,3,26	./.	./.	./.	./.	./.	./.	./.	./.	1/1:2,6:8:9.02:99,9,0	./.	./.	1/1:2,2:3:2.92:17,3,0	1/1:0,1:1:3.01:33,3,0	1/1:3,3:6:9.02:99,9,0	1/1:2,6:5:9.02:99,9,0	0/1:2,2:1:0:0,0,0	1/1:0,5:5:9.02:99,9,0
chr10	40195681	.	CT	C	207.84	PASS	AB=0.749;AC=2;AF=0.50;AN=4;BaseQRankSum=0.510;DP=90;FS=2.331;HRun=3;HaplotypeScore=198.8775;MQ=67.32;MQ0=63;MQRankSum=-1.302;QD=4.72;ReadPosRankSum=-1.529;VQSLOD=-0.2740;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/1:9,6:8:29.11:69,0,29	0/1:21,8:13:18.31:203,0,18	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.
chr10	40197649	.	GT	G	6980.80	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=3.788;DP=638;FS=3.144;HRun=10;HaplotypeScore=84.7027;InbreedingCoeff=0.9544;MQ=78.78;MQ0=0;MQRankSum=0.561;QD=20.59;ReadPosRankSum=1.948;VQSLOD=5.7552;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,111,1161	0/0:5,0:5:12.03:0,12,133	0/0:15,1:16:6.98:0,7,269	0/0:15,0:15:18.45:0,18,193	0/0:30,0:29:72.16:0,72,773	1/1:3,25:28:55.40:605,55,0	1/1:3,21:24:56.98:494,57,0	1/1:3,21:24:59.94:514,60,0	1/1:2,20:22:40.41:498,40,0	0/0:20,0:22:62.97:0,63,658	0/0:17,0:19:47.79:0,48,484	1/1:2,21:23:56.99:495,57,0	0/0:24,0:24:63.16:0,63,690	0/0:23,2:25:37.11:0,37,638	0/0:24,0:24:68.98:0,69,731	0/0:24,0:25:66.01:0,66,711	0/0:20,0:19:57.15:0,57,631	0/0:12,0:12:30.08:0,30,332	1/1:5,11:16:15.12:293,15,0	1/1:2,19:21:56.98:495,57,0	1/1:3,20:23:47.99:417,48,0	0/0:15,0:19:41.78:0,42,427	1/1:7,23:30:59.11:604,59,0	1/1:1,13:14:19.20:293,19,0	1/1:3,17:20:44.98:391,45,0	1/1:6,22:28:2.60:474,3,0	1/1:5,30:34:89.97:781,90,0	1/1:4,27:31:53.64:627,54,0
chr10	40198308	.	CAT	C	4779.84	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=2.859;DP=479;FS=13.377;HRun=0;HaplotypeScore=110.7254;InbreedingCoeff=0.5487;MQ=73.38;MQ0=8;MQRankSum=-4.674;QD=11.44;ReadPosRankSum=3.319;VQSLOD=3.9890;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,20:22:6.02:88,6,0	1/1:0,9:10:5.99:66,6,0	0/0:34,0:19:19.83:0,20,298	0/0:27,0:16:35.08:0,35,376	1/1:30,0:30:71.81:582,72,0	1/1:14,0:14:38.94:320,39,0	1/1:16,0:16:29.96:248,30,0	1/1:27,0:25:44.27:525,44,0	1/1:21,0:21:24:207,24,0	1/1:1,18:19:50.94:460,51,0	1/1:13,1:14:9.02:115,9,0	1/1:15,0:15:3:26,3,0	1/1:0,10:10:3.01:44,3,0	1/1:8,0:8:20.97:174,21,0	1/1:13,0:13:35.89:290,36,0	1/1:10,0:10:5.73:53,6,0	1/1:23,0:23:6:53,6,0	1/1:2,21:23:12.02:143,12,0	1/1:6,0:6:17.96:144,18,0	1/1:19,0:19:41.18:330,41,0	1/1:8,0:8:5.99:50,6,0	1/1:20,0:20:5.63:43,6,0	1/1:16,0:16:11.91:94,12,0	1/1:18,0:18:5.90:43,6,0	1/1:15,0:15:14.98:124,15,0	1/1:17,0:17:46.94:383,47,0	1/1:16,0:16:14.98:125,15,0	1/1:7,0:7:5.99:50,6,0
chr10	40198309	.	ATATG	A	5305.59	PASS	AB=0.938;AC=46;AF=0.821;AN=56;BaseQRankSum=2.565;DP=478;FS=8.486;HRun=0;HaplotypeScore=118.0939;InbreedingCoeff=0.4165;MQ=72.54;MQ0=8;MQRankSum=-4.406;QD=13.78;ReadPosRankSum=3.564;VQSLOD=4.0721;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:22:0.47:0,0,1	1/1:10,0:10:2.83:54,3,0	0/0:34,0:19:19.70:0,20,298	0/0:26,0:15:35.09:0,35,377	1/1:25,3:30:71.94:694,72,0	0/1:12,0:14:1.76:306,0,2	1/1:13,1:16:29.98:276,30,0	1/1:27,0:25:44.27:525,44,0	1/1:0,0:21:24.08:318,24,0	1/1:19,0:19:30.15:331,30,0	1/1:3,10:13:2.39:59,2,0	1/1:0,15:15:2.90:58,3,0	0/0:10,0:10:0:0,0,0	0/1:9,0:9:38.05:126,0,38	1/1:11,2:13:35.97:342,36,0	1/1:0,10:10:5.96:117,6,0	1/1:1,22:23:6.02:118,6,0	1/1:21,2:23:5.72:119,6,0	1/1:0,0:6:17.97:158,18,0	1/1:9,0:19:42.03:454,42,0	1/1:0,0:8:6.02:78,6,0	1/1:0,20:20:5.67:75,6,0	1/1:2,0:16:11.78:136,12,0	1/1:0,0:18:5.93:57,6,0	1/1:0,0:15:15.05:194,15,0	1/1:13,0:17:46.99:438,47,0	1/1:0,0:16:15.05:195,15,0	1/1:0,0:7:6.02:78,6,0
chr10	40198705	.	C	CT	6657.11	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-10.364;DP=616;FS=1.074;HRun=10;HaplotypeScore=65.3846;InbreedingCoeff=0.9373;MQ=68.91;MQ0=1;MQRankSum=-0.417;QD=20.80;ReadPosRankSum=-0.848;VQSLOD=5.4188;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:90.52:0,91,903	0/0:10,0:10:20.96:0,21,172	0/0:17,1:16:3.87:0,4,210	0/0:15,0:13:9.87:0,10,76	1/1:2,23:25:59.87:600,60,0	0/0:23,0:23:62.91:0,63,515	0/0:16,0:16:35.86:0,36,285	1/1:10,17:27:7.85:495,8,0	0/0:17,0:17:44.53:0,45,352	0/0:21,0:21:53.93:0,54,441	0/0:23,0:23:65.77:0,66,524	0/0:17,0:18:40.46:0,40,307	0/0:13,0:13:38.89:0,39,309	0/0:16,0:16:47.87:0,48,381	1/1:2,17:19:42.11:448,42,0	1/1:1,16:17:42.11:448,42,0	1/1:6,35:41:59.53:827,60,0	0/0:13,0:13:35.94:0,36,292	1/1:5,20:25:35.29:537,35,0	1/1:9,24:33:44.44:614,44,0	1/1:5,18:23:5.75:434,6,0	1/1:5,20:25:36.05:488,36,0	0/0:16,0:16:38.91:0,39,313	0/0:26,1:29:40.98:0,41,518	1/1:1,16:17:48.12:511,48,0	1/1:6,12:18:33.08:352,33,0	1/1:11,23:33:26.91:608,27,0	1/1:3,13:16:8.44:295,8,0
chr10	40199102	.	G	GGAGT	45913.95	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-8.181;DP=795;FS=0.000;HRun=0;HaplotypeScore=111.9277;InbreedingCoeff=0.9988;MQ=68.60;MQ0=2;MQRankSum=-8.551;QD=60.65;ReadPosRankSum=6.007;VQSLOD=6.6101;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,43:44:99:2702,105,0	1/1:3,10:13:24.08:639,24,0	0/0:16,0:15:41.92:0,42,684	0/0:22,0:22:51.17:0,51,899	1/1:2,25:27:60.21:1565,60,0	1/1:1,14:16:36.12:958,36,0	1/1:6,19:27:60.06:1537,60,0	1/1:9,18:28:75.26:1879,75,0	1/1:3,27:31:78.27:2048,78,0	1/1:5,31:37:99:2748,108,0	1/1:1,22:24:60.21:1579,60,0	1/1:3,36:41:93.32:2455,93,0	1/1:3,18:24:51.17:1348,51,0	1/1:7,27:34:93.32:2390,93,0	1/1:4,34:39:87.30:2294,87,0	1/1:5,20:25:66.23:1709,66,0	1/1:3,35:40:75.15:1912,75,0	1/1:1,23:25:60.21:1598,60,0	1/1:6,14:21:57.16:1321,57,0	1/1:4,23:29:57.20:1503,57,0	1/1:7,45:51:99:3039,114,0	1/1:3,23:28:72.24:1821,72,0	1/1:2,19:23:42.01:1118,42,0	1/1:4,31:35:77.44:2066,77,0	1/1:3,19:22:51.18:1359,51,0	1/1:4,17:22:60.21:1540,60,0	1/1:5,24:31:66.23:1750,66,0	1/1:1,16:17:39.61:1034,40,0
chr10	40199727	.	C	CT	5025.29	PASS	AB=0.691;AC=27;AF=0.482;AN=56;BaseQRankSum=-5.888;DP=560;FS=10.786;HRun=11;HaplotypeScore=78.0604;InbreedingCoeff=0.7076;MQ=70.06;MQ0=1;MQRankSum=-0.470;QD=16.75;ReadPosRankSum=-2.445;VQSLOD=4.2030;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:68.64:0,69,527	0/1:7,1:8:9.52:10,0,118	0/0:15,0:13:5.68:0,6,104	0/0:10,0:9:1.53:0,2,58	0/0:29,0:29:50.65:0,51,395	0/1:4,17:21:27.57:293,0,28	1/1:2,10:14:29.69:261,30,0	1/1:12,19:30:51.99:497,52,0	1/1:4,12:17:13.56:297,14,0	0/0:28,0:28:53.70:0,54,416	0/0:16,0:16:32.83:0,33,252	1/1:6,9:15:3.78:209,4,0	0/0:13,0:13:29.75:0,30,223	0/0:19,0:19:50.79:0,51,395	0/0:18,2:20:20.35:0,20,341	0/0:22,0:22:23.41:0,23,362	0/0:19,1:21:43.83:0,44,331	0/0:19,1:20:14.38:0,14,291	1/1:5,14:19:38.05:367,38,0	1/1:6,22:31:51.46:643,51,0	1/1:4,20:24:28.76:466,29,0	0/0:19,0:19:44.76:0,45,348	1/1:3,13:16:6.95:245,7,0	1/1:2,18:20:42.08:426,42,0	1/1:3,13:17:26.88:251,27,0	1/1:8,17:25:24.71:411,25,0	1/1:6,11:17:27.89:275,28,0	0/1:10,14:24:38.84:372,0,39
chr10	40200343	.	A	AACAT	5965.59	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=0.574;DP=836;FS=0.885;HRun=0;HaplotypeScore=144.6681;InbreedingCoeff=0.8920;MQ=57.52;MQ0=3;MQRankSum=-5.594;QD=29.68;ReadPosRankSum=3.959;VQSLOD=4.9947;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:83.90:0,84,1298	0/0:13,0:13:30.10:0,30,501	0/0:39,0:27:36.07:0,36,553	0/0:31,0:22:35.67:0,36,511	0/0:28,0:28:57.10:0,57,904	0/0:23,0:23:57.18:0,57,925	0/0:25,0:25:42.13:0,42,675	1/1:11,11:21:27.09:614,27,0	0/0:35,0:35:84.28:0,84,1384	0/0:45,0:45:99:0,111,1830	0/0:29,0:29:60.20:0,60,980	0/0:47,0:47:99:0,129,2079	0/0:38,0:38:96.32:0,96,1576	0/0:21,0:21:51.17:0,51,856	0/0:43,0:43:99:0,111,1803	0/0:43,0:43:99:0,105,1689	0/0:33,0:34:67.09:0,67,1120	0/1:29,0:29:38.50:38,0,986	1/1:8,2:10:6.02:148,6,0	1/1:5,21:26:48.16:1188,48,0	1/1:9,23:32:23.41:535,23,0	0/0:30,0:30:69.12:0,69,1040	0/0:29,0:29:66.21:0,66,1082	0/0:33,0:33:81.10:0,81,1190	1/1:6,16:22:39.13:965,39,0	1/1:11,12:23:42.14:993,42,0	1/1:4,22:26:48.16:1187,48,0	1/1:6,4:10:12.04:297,12,0
chr10	40200403	.	TACATATACACACACCCATATCCATACATACAA	T	171.20	PASS	AB=0.817;AC=8;AF=0.167;AN=48;BaseQRankSum=4.661;DP=722;FS=14.617;HRun=0;HaplotypeScore=485.6042;InbreedingCoeff=0.4763;MQ=52.85;MQ0=45;MQRankSum=-4.211;QD=1.90;ReadPosRankSum=-1.457;VQSLOD=0.3576;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:28,27:55:71.98:72,0,1971	0/0:17,0:17:51.16:0,51,2884	0/0:57,0:15:38.87:0,39,458	0/0:22,0:7:17.89:0,18,192	0/0:29,0:29:72.23:0,72,4228	0/0:29,0:29:78.27:0,78,4866	0/0:21,0:21:56.90:0,57,2559	0/0:7,0:3:2.19:0,2,5	0/0:37,0:37:96.33:0,96,5235	0/0:43,0:42:99:0,111,5589	0/0:27,0:27:78.12:0,78,3842	0/0:42,0:42:99:0,111,5983	0/0:43,0:43:81.07:0,81,4390	0/1:25,1:26:99:123,0,2399	0/0:38,0:38:96.33:0,96,5213	0/0:42,0:42:99:0,102,6210	0/0:36,0:36:46.52:0,47,4848	0/0:28,0:28:62.22:0,62,3370	1/1:3,0:2:2.98:21,3,0	1/1:3,0:2:2.94:18,3,0	1/1:3,0:3:2.57:57,3,0	0/0:33,0:33:90.22:0,90,4609	0/0:32,0:32:90.30:0,90,5302	0/0:39,0:39:96.24:0,96,5924	./.	./.	./.	./.
chr10	40200422	.	ATC	A	50.31	PASS	AB=0.905;AC=8;AF=0.160;AN=50;BaseQRankSum=6.105;DP=679;FS=3.663;HRun=0;HaplotypeScore=107.0438;InbreedingCoeff=0.2542;MQ=54.83;MQ0=52;MQRankSum=-4.094;QD=1.01;ReadPosRankSum=-2.727;VQSLOD=1.3372;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:20.68:0,21,807	0/0:17,0:17:45.13:0,45,913	0/0:47,0:8:16.40:0,16,263	0/1:20,0:6:5.09:5,0,111	0/0:31,0:31:78.24:0,78,1543	0/0:31,0:31:93.28:0,93,1807	0/0:24,0:24:69.24:0,69,1379	0/0:8,0:3:9.03:0,9,181	0/0:36,0:36:99:0,105,2088	0/0:39,0:38:99:0,114,2175	0/0:29,0:29:72.24:0,72,1395	0/0:44,0:44:90.29:0,90,1779	0/0:39,0:39:66.09:0,66,1229	0/1:20,1:21:39.50:40,0,1008	0/0:32,0:32:72.25:0,72,1461	0/0:36,0:36:87.30:0,87,1764	0/0:30,0:30:75.23:0,75,1458	0/0:24,1:24:21.32:0,21,887	0/1:1,1:2:26.94:27,0,53	0/1:4,0:3:40.93:41,0,49	1/1:2,0:2:2.74:12,3,0	0/0:36,0:36:78.25:0,78,1516	0/0:37,0:37:87.20:0,87,1739	0/0:40,0:40:84.24:0,84,1646	./.	./.	./.	1/1:0,1:1:3.01:47,3,0
chr10	40200435	.	A	AACATACATACATACAT	1047.52	PASS	AB=0.792;AC=18;AF=0.346;AN=52;BaseQRankSum=5.377;DP=705;FS=19.141;HRun=0;HaplotypeScore=234.1558;InbreedingCoeff=0.7201;MQ=55.62;MQ0=43;MQRankSum=-5.898;QD=5.99;ReadPosRankSum=-4.742;VQSLOD=0.4641;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:44,0:44:5.94:254,6,0	0/0:17,0:17:27:0,27,924	0/0:41,0:6:2.85:0,3,161	0/1:23,0:5:7.95:8,0,77	0/0:31,0:31:56.93:0,57,1379	0/0:32,0:31:72.21:0,72,2506	0/0:22,0:22:45.14:0,45,1390	1/1:12,0:8:15.01:199,15,0	0/0:31,0:31:72.16:0,72,2196	0/0:38,0:37:74.40:0,74,2556	0/0:27,0:27:50.51:0,51,990	0/0:38,0:38:42.14:0,42,1658	0/1:12,22:42:0:0,0,0	1/1:20,0:20:21.04:501,21,0	0/0:27,0:27:33.08:0,33,1135	0/0:36,0:36:36.12:0,36,1378	0/0:27,0:28:39.09:0,39,1301	0/0:31,0:30:25.90:0,26,1063	1/1:5,0:5:7.55:87,8,0	1/1:14,0:14:5.95:50,6,0	1/1:7,0:7:2.56:35,3,0	0/0:32,0:32:68.43:0,68,1675	0/0:37,0:37:56.98:0,57,1887	0/0:39,0:39:39.13:0,39,1379	./.	1/1:6,0:6:2.98:37,3,0	./.	1/1:2,0:2:3.01:46,3,0
chr10	40200483	.	TACATACAA	T	2587.79	PASS	AB=0.993;AC=22;AF=0.393;AN=56;BaseQRankSum=1.662;DP=740;FS=0.450;HRun=0;HaplotypeScore=220.1842;InbreedingCoeff=0.6193;MQ=56.50;MQ0=11;MQRankSum=-2.284;QD=8.65;ReadPosRankSum=-0.472;VQSLOD=2.1174;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:57.49:0,57,1813	0/0:16,1:17:15.15:0,15,71	0/0:29,0:17:34.92:0,35,342	0/0:26,0:13:16.84:0,17,167	0/0:28,1:29:16.36:0,16,90	0/0:26,0:26:49.62:0,50,428	0/1:20,0:20:20.16:20,0,298	1/1:29,0:27:53.75:424,54,0	0/0:27,0:27:62.85:0,63,548	0/1:41,0:41:99:249,0,108	0/1:22,0:22:24.41:24,0,62	0/0:42,0:42:36.11:0,36,1079	0/0:36,0:36:62.98:0,63,2121	0/0:21,0:21:23.55:0,24,1324	1/1:5,22:27:14.98:326,15,0	0/0:29,0:29:19.89:0,20,95	0/0:22,0:22:2.34:0,2,43	0/0:34,0:34:17.15:0,17,91	1/1:13,0:11:26.86:310,27,0	1/1:23,0:23:19.72:155,20,0	1/1:10,0:10:5.30:68,5,0	0/1:35,1:36:99:107,0,125	0/0:30,0:30:9.34:0,9,699	0/0:33,0:33:22.32:0,22,690	1/1:23,0:23:15.05:259,15,0	1/1:21,0:21:44.05:474,44,0	1/1:24,0:24:6.02:109,6,0	1/1:10,0:10:17.94:265,18,0
chr10	40200491	.	AACATACAAACATACAT	A	4591.93	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=-1.661;DP=721;FS=1.949;HRun=0;HaplotypeScore=284.6798;InbreedingCoeff=0.8598;MQ=57.04;MQ0=13;MQRankSum=-2.777;QD=22.62;ReadPosRankSum=-2.004;VQSLOD=3.0182;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:60.59:0,61,3546	0/0:14,0:14:19:0,19,633	0/0:23,0:16:34.92:0,35,342	0/0:22,0:13:14.47:0,14,163	0/0:29,0:29:27.56:0,28,909	0/0:28,0:28:77.84:0,78,1606	0/0:17,0:17:25.86:0,26,688	1/1:31,0:27:59.77:507,60,0	0/0:27,0:27:59.72:0,60,1511	0/1:40,0:40:99:180,0,1677	0/0:22,0:22:24.93:0,25,811	0/0:43,0:43:39.11:0,39,2025	0/0:35,0:35:69.07:0,69,4159	0/0:20,0:20:59.98:0,60,2831	0/0:25,0:25:24.08:0,24,421	0/0:26,0:26:21.07:0,21,829	0/0:20,0:20:1.15:0,1,460	0/0:32,0:32:23.36:0,23,892	1/1:8,3:10:26.86:536,27,0	1/1:17,7:24:41.53:477,42,0	1/1:11,0:11:8.36:160,8,0	0/0:37,0:37:44.97:0,45,1537	0/0:27,0:27:30.31:0,30,1318	0/0:33,0:33:25.33:0,25,1437	1/1:0,24:24:20.99:675,21,0	1/1:0,24:24:62.76:1152,63,0	1/1:0,25:25:17.89:339,18,0	1/1:3,10:13:17.94:566,18,0
chr10	40200495	.	TACAA	T	6731.94	PASS	AB=0.931;AC=37;AF=0.661;AN=56;BaseQRankSum=2.292;DP=710;FS=4.860;HRun=0;HaplotypeScore=171.0774;InbreedingCoeff=0.4660;MQ=56.85;MQ0=14;MQRankSum=2.826;QD=11.98;ReadPosRankSum=2.275;VQSLOD=4.0673;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:60.54:0,61,1327	0/1:1,13:14:0.67:300,0,1	0/0:22,0:15:34.92:0,35,342	0/0:18,0:10:10.97:0,11,160	1/1:4,23:27:16.17:547,16,0	0/1:28,0:28:99:177,0,284	0/0:15,0:15:7.52:0,8,226	1/1:5,25:26:70.43:535,70,0	0/1:25,0:25:99:123,0,308	1/1:3,33:36:98.61:1310,99,0	1/1:1,19:20:18.32:426,18,0	0/1:43,0:43:12.81:13,0,427	0/0:36,0:36:71.40:0,71,1566	0/0:20,0:20:36.10:0,36,887	0/1:24,0:24:83.93:99,0,84	1/1:1,25:26:21.07:398,21,0	1/1:4,14:18:14.92:241,15,0	1/1:3,28:31:24.54:422,25,0	1/1:14,0:13:23.20:221,23,0	1/1:32,0:32:25.46:203,25,0	1/1:12,0:11:5.99:68,6,0	1/1:4,32:36:56.31:910,56,0	0/1:27,0:27:23.27:23,0,330	0/1:33,0:33:0.38:0,0,295	1/1:24,0:24:14.97:125,15,0	1/1:24,0:24:47.02:382,47,0	1/1:25,0:25:5.98:55,6,0	1/1:13,0:13:17.92:154,18,0
chr10	40200499	.	A	AATAT	3123.94	PASS	AB=1.000;AC=16;AF=0.286;AN=56;BaseQRankSum=-8.222;DP=702;FS=4.226;HRun=0;HaplotypeScore=181.5216;InbreedingCoeff=0.5028;MQ=56.80;MQ0=15;MQRankSum=3.704;QD=10.96;ReadPosRankSum=-3.720;VQSLOD=2.4517;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:54.13:0,54,981	0/0:14,0:14:0.07:0,0,130	0/0:22,0:13:35.99:0,36,332	0/0:16,0:9:9.14:0,9,146	0/1:25,0:25:57.04:57,0,168	1/1:17,0:27:5.25:264,5,0	1/1:13,0:15:20.39:227,20,0	0/0:30,0:26:16.98:0,17,385	1/1:18,0:25:29.74:350,30,0	0/1:33,0:33:26.78:27,0,569	0/1:20,0:20:25.51:26,0,190	1/1:3,42:46:36.04:983,36,0	0/0:38,0:38:66.16:0,66,1153	0/0:20,0:20:53.93:0,54,741	0/0:23,0:23:23.99:0,24,283	0/0:25,0:25:21:0,21,184	0/0:17,0:17:14.92:0,15,123	0/0:30,0:30:16.53:0,17,175	0/0:14,0:13:38.63:0,39,281	0/0:33,0:33:2.23:0,2,157	0/0:12,0:11:8.77:0,9,72	0/1:35,0:35:45.80:46,0,314	1/1:0,24:25:23.57:660,24,0	1/1:5,28:34:24.08:669,24,0	0/0:24,0:24:4.53:0,5,17	0/0:24,0:24:23.44:0,23,311	0/0:25,0:25:5.44:0,5,27	0/0:13,0:13:10.73:0,11,68
chr10	40200503	.	TAC	T	323.74	PASS	AB=0.854;AC=8;AF=0.143;AN=56;BaseQRankSum=5.907;DP=717;FS=0.601;HRun=0;HaplotypeScore=181.0419;InbreedingCoeff=0.2339;MQ=55.59;MQ0=17;MQRankSum=-3.097;QD=2.51;ReadPosRankSum=1.408;VQSLOD=2.7946;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:63.02:0,63,1152	0/0:14,0:14:19.08:0,19,133	0/0:21,0:11:27.06:0,27,341	0/0:19,0:9:16.52:0,17,186	0/0:28,0:28:41.94:0,42,360	0/1:17,9:27:99:252,0,196	0/1:12,2:14:0.47:0,0,143	0/0:33,0:29:81.25:0,81,1117	0/1:20,6:26:99:142,0,227	0/0:33,0:33:86.22:0,86,783	0/0:22,0:22:30.27:0,30,196	0/0:40,0:40:45.13:0,45,718	0/0:38,0:38:72.18:0,72,1337	0/0:21,0:21:57.19:0,57,940	0/0:23,0:23:1.75:0,2,210	0/0:26,0:26:21.76:0,22,127	0/0:17,0:17:12.78:0,13,74	0/0:30,0:30:23.97:0,24,151	0/0:16,0:15:3.53:0,4,413	0/0:36,0:36:39.06:0,39,526	0/0:15,0:14:14.55:0,15,161	0/0:37,0:37:54.95:0,55,421	0/0:23,0:23:26.77:0,27,415	0/0:32,0:32:30.09:0,30,490	1/1:24,0:24:4.62:17,5,0	0/0:24,0:24:9.44:0,9,542	1/1:25,0:25:1.70:12,2,0	0/1:13,0:13:18.86:19,0,25
chr10	40200690	.	TAACA	T	13116.57	PASS	AB=0.718;AC=24;AF=0.429;AN=56;BaseQRankSum=16.821;DP=660;FS=0.299;HRun=0;HaplotypeScore=115.6117;InbreedingCoeff=0.8557;MQ=76.24;MQ0=0;MQRankSum=-5.861;QD=44.61;ReadPosRankSum=4.656;VQSLOD=5.1621;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,32:32:87.30:1686,87,0	1/1:0,10:10:27.09:523,27,0	0/0:22,0:22:63.22:0,63,1601	0/0:21,0:21:56.65:0,57,1490	1/1:0,29:29:60.04:1162,60,0	0/0:22,0:22:63.20:0,63,1667	0/0:17,0:17:51.18:0,51,1380	0/0:33,0:33:96.32:0,96,2478	0/0:18,0:18:54.19:0,54,1476	1/1:2,30:32:87.25:1553,87,0	1/1:0,29:29:84.20:1551,84,0	0/0:31,0:31:90.29:0,90,2356	1/1:2,18:20:47.91:930,48,0	0/1:1,23:24:15.98:1154,0,16	1/1:0,23:23:57.20:1104,57,0	1/1:1,9:10:27.09:523,27,0	1/1:1,25:26:63.18:1183,63,0	1/1:1,13:14:36.08:659,36,0	0/0:17,0:17:51.16:0,51,1246	0/0:29,0:29:87.30:0,87,2381	0/0:28,0:28:78.26:0,78,2081	1/1:1,19:20:54.19:1043,54,0	0/0:31,0:31:93.31:0,93,2437	0/0:21,0:21:57.18:0,57,1466	0/0:21,0:21:60.21:0,60,1629	0/1:23,2:25:44.08:44,0,1618	0/0:40,0:40:99:0,120,3274	0/0:15,0:15:45.15:0,45,1216
chr10	40201161	.	TACACACAC	T	1943.58	PASS	AB=0.963;AC=17;AF=0.340;AN=50;BaseQRankSum=-1.493;DP=529;FS=2.689;HRun=0;HaplotypeScore=136.9087;InbreedingCoeff=0.4470;MQ=57.20;MQ0=15;MQRankSum=0.692;QD=11.11;ReadPosRankSum=0.345;VQSLOD=2.5101;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:28:63.03:63,0,88	0/0:15,0:15:17.29:0,17,387	./.	0/0:37,0:28:6.02:0,6,100	0/0:21,0:20:20.94:0,21,502	1/1:21,0:21:27.09:388,27,0	0/1:12,0:14:12.40:81,0,12	1/1:18,1:16:12.02:184,12,0	0/1:15,0:15:21.88:286,0,22	0/0:18,0:17:43.96:0,44,1081	0/0:13,0:12:12.04:0,12,380	0/0:24,0:23:14.75:0,15,350	0/1:12,0:12:5.03:5,0,14	0/1:12,0:12:13.01:26,0,13	0/0:18,0:18:15.02:0,15,380	0/0:23,0:22:18.47:0,18,383	0/0:15,0:14:9.92:0,10,253	0/0:10,0:10:12.01:0,12,286	1/1:8,4:12:10.36:241,10,0	./.	0/0:17,14:32:3.01:0,3,91	0/0:22,0:22:6.49:0,6,143	0/0:14,0:14:18.06:0,18,441	0/0:32,0:30:33.11:0,33,1023	./.	1/1:8,10:17:24.08:562,24,0	1/1:11,0:12:3.01:68,3,0	1/1:2,7:9:9.03:210,9,0
chr10	40201199	.	CAGAGAGAGAGAGAG	C	703.98	PASS	AB=0.906;AC=12;AF=0.273;AN=44;BaseQRankSum=2.939;DP=477;FS=41.848;HRun=0;HaplotypeScore=163.1017;InbreedingCoeff=0.0908;MQ=41.13;MQ0=28;MQRankSum=-1.165;QD=4.02;ReadPosRankSum=-0.758;VQSLOD=1.0113;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:21.64:0,22,322	1/1:13,0:14:1.67:86,2,0	./.	./.	0/1:17,4:20:0:0,0,0	0/0:26,0:25:11.41:0,11,210	0/1:17,0:14:4.31:4,0,124	0/0:20,0:16:15.52:0,16,406	0/0:17,0:16:13.85:0,14,429	0/1:19,0:21:5.52:301,0,6	./.	0/1:17,0:15:14.83:32,0,15	0/0:14,0:14:15.01:0,15,360	0/0:15,0:14:9.03:0,9,320	0/1:14,2:17:8.23:106,0,8	1/1:16,3:18:2.06:112,2,0	0/1:11,1:10:46.22:46,0,64	0/1:8,1:11:13.98:79,0,14	0/0:10,0:9:8.51:0,9,181	0/0:21,0:21:0.47:0,0,1	0/0:35,0:34:15.05:0,15,792	0/0:17,2:19:0.47:0,0,1	./.	0/1:24,0:20:60.79:61,0,207	./.	0/0:19,0:18:17.42:0,17,687	0/0:21,0:18:17.49:0,17,503	./.
chr10	40201846	.	GGAGAGAGAGAGA	G	650.09	PASS	AB=0.952;AC=10;AF=0.250;AN=40;BaseQRankSum=2.516;DP=501;FS=28.411;HRun=0;HaplotypeScore=163.0470;InbreedingCoeff=0.5241;MQ=73.94;MQ0=10;MQRankSum=-3.370;QD=5.29;ReadPosRankSum=0.477;VQSLOD=1.3077;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:23:6.02:0,6,285	0/0:9,0:9:7.71:0,8,181	./.	0/0:31,0:19:0.89:0,1,2	0/0:18,0:17:9.03:0,9,273	./.	./.	0/1:19,0:18:3.01:19,0,3	./.	0/0:15,0:14:33.11:0,33,1404	0/0:18,0:18:6.02:0,6,191	./.	0/0:17,0:17:29.13:0,29,1198	0/0:15,0:15:21.07:0,21,773	0/0:15,0:15:18.06:0,18,677	0/0:8,0:14:9.03:0,9,304	0/0:30,0:30:44.99:0,45,1948	0/0:18,0:18:9.03:0,9,326	0/0:12,0:12:0:0,0,0	1/1:23,5:28:3.01:103,3,0	./.	0/0:21,0:21:15.05:0,15,588	./.	./.	1/1:8,4:12:6.02:205,6,0	1/1:23,0:24:5.75:167,6,0	1/1:17,4:20:6.02:205,6,0	0/1:17,0:18:6.95:76,0,7
chr10	40203969	.	GCA	G	2353.43	PASS	AB=0.862;AC=21;AF=0.375;AN=56;BaseQRankSum=-0.208;DP=570;FS=1.827;HRun=0;HaplotypeScore=132.0243;InbreedingCoeff=0.6040;MQ=57.77;MQ0=7;MQRankSum=3.516;QD=10.70;ReadPosRankSum=2.961;VQSLOD=3.6034;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:34:29.03:0,29,240	1/1:2,3:5:3.01:34,3,0	0/1:19,0:8:5.19:5,0,30	0/0:24,0:9:3.01:0,3,46	1/1:8,18:27:32.93:351,33,0	0/0:23,0:22:9:0,9,100	0/0:41,0:40:24.42:0,24,195	0/0:23,0:18:29.86:0,30,288	0/0:16,0:18:11.96:0,12,96	1/1:7,15:23:50.97:559,51,0	1/1:3,5:10:20.72:198,21,0	0/0:13,0:16:11.97:0,12,98	0/0:10,0:18:30.03:0,30,338	0/0:13,0:22:33.03:0,33,345	1/1:12,9:22:14.88:150,15,0	1/1:2,10:14:29.75:300,30,0	1/1:8,18:27:1.49:471,1,0	0/1:5,12:17:8.79:242,0,9	0/0:16,0:15:23.37:0,23,187	0/0:22,0:21:14.95:0,15,173	0/0:18,0:17:5.95:0,6,42	1/1:9,11:20:20.85:217,21,0	1/1:19,0:18:0.49:2,0,0	0/0:22,0:30:0.04:0,0,1	0/0:20,0:20:8.81:0,9,73	0/1:17,0:14:5.95:6,0,179	0/0:18,0:20:11.80:0,12,89	0/0:5,0:5:4.21:0,4,23
chr10	40204715	.	GTGGTGA	G	8234.72	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=5.012;DP=386;FS=66.470;HRun=0;HaplotypeScore=93.2032;InbreedingCoeff=0.5668;MQ=69.41;MQ0=3;MQRankSum=-4.394;QD=24.88;ReadPosRankSum=4.088;VQSLOD=1.6547;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,13:19:18.06:408,18,0	1/1:1,5:6:9.03:207,9,0	0/0:28,0:18:31.01:0,31,687	0/0:26,0:21:43.15:0,43,936	1/1:1,13:14:35.78:617,36,0	1/1:8,4:12:23.96:363,24,0	1/1:0,19:19:27.09:618,27,0	1/1:2,12:13:35.96:460,36,0	1/1:0,6:6:6.02:137,6,0	1/1:2,18:20:39.03:642,39,0	1/1:1,8:9:6.02:137,6,0	1/1:8,5:13:38.86:569,39,0	1/1:2,6:8:2.80:68,3,0	1/1:1,7:8:9.03:206,9,0	1/1:1,6:7:3.01:69,3,0	1/1:0,11:11:12.04:270,12,0	1/1:1,12:13:14.73:343,15,0	1/1:1,8:9:3.01:69,3,0	1/1:4,15:18:32.89:468,33,0	1/1:1,6:7:5.95:87,6,0	1/1:7,16:23:6.02:101,6,0	1/1:3,16:19:29.91:582,30,0	1/1:2,6:8:6.02:137,6,0	1/1:2,17:19:11.61:216,12,0	1/1:0,14:14:24.03:500,24,0	1/1:6,11:17:26.96:274,27,0	1/1:0,9:9:15.05:343,15,0	1/1:1,7:8:15.05:344,15,0
chr10	40204780	.	TA	T	5892.41	PASS	AB=1.000;AC=53;AF=0.981;AN=54;BaseQRankSum=-0.326;DP=203;FS=4.354;HRun=1;HaplotypeScore=95.1486;InbreedingCoeff=-0.0475;MQ=33.11;MQ0=1;MQRankSum=-2.434;QD=29.17;ReadPosRankSum=2.268;VQSLOD=4.7196;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,11:11:30.09:371,30,0	1/1:0,4:4:12.04:148,12,0	./.	0/1:5,0:3:20.97:21,0,22	1/1:0,10:10:15.04:177,15,0	1/1:0,9:9:24.08:296,24,0	1/1:0,8:7:18.06:222,18,0	1/1:0,10:10:30.09:371,30,0	1/1:0,9:9:27.08:333,27,0	1/1:0,17:17:48.15:594,48,0	1/1:0,5:5:9.03:111,9,0	1/1:0,8:8:24.08:296,24,0	1/1:0,6:6:18.06:222,18,0	1/1:0,4:4:12.04:148,12,0	1/1:0,9:8:24.08:296,24,0	1/1:0,8:8:24.08:296,24,0	1/1:0,5:2:3.01:37,3,0	1/1:0,4:2:6.02:74,6,0	1/1:1,8:9:18.06:222,18,0	1/1:0,1:1:3.01:37,3,0	1/1:0,9:9:12.04:148,12,0	1/1:0,6:6:15.05:185,15,0	1/1:0,3:3:6.02:74,6,0	1/1:0,8:5:5.96:74,6,0	1/1:0,10:10:30.09:371,30,0	1/1:0,8:8:21.07:260,21,0	1/1:0,12:11:30.08:358,30,0	1/1:0,4:4:12.04:148,12,0
chr10	40204789	.	GA	G	6671.46	PASS	AC=52;AF=0.963;AN=54;BaseQRankSum=-1.732;DP=213;FS=0.000;HRun=1;HaplotypeScore=91.8984;InbreedingCoeff=0.3559;MQ=32.94;MQ0=1;MQRankSum=-1.732;QD=31.62;ReadPosRankSum=0.997;VQSLOD=4.5129;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,14:14:30.09:418,30,0	1/1:0,3:3:9.03:125,9,0	./.	0/0:1,1:1:3:0,3,26	1/1:0,10:9:15.05:207,15,0	1/1:0,9:9:24.04:312,24,0	1/1:0,10:9:18.05:251,18,0	1/1:0,10:10:30.10:418,30,0	1/1:0,9:9:27.09:376,27,0	1/1:0,16:16:45.15:627,45,0	1/1:0,5:5:9.03:125,9,0	1/1:0,10:10:27.05:354,27,0	1/1:0,7:7:21.07:292,21,0	1/1:0,4:4:12.04:167,12,0	1/1:0,10:9:24.07:334,24,0	1/1:0,9:9:24.04:312,24,0	1/1:0,5:2:3.01:42,3,0	1/1:0,5:3:9.03:125,9,0	1/1:1,11:11:24.08:331,24,0	1/1:0,1:1:3.01:42,3,0	1/1:0,10:10:12.03:167,12,0	1/1:0,6:6:15.05:209,15,0	1/1:0,3:3:5.98:62,6,0	1/1:0,8:6:5.96:83,6,0	1/1:0,10:10:30.10:418,30,0	1/1:0,8:8:20.98:249,21,0	1/1:0,13:12:36.10:479,36,0	1/1:0,4:4:12:145,12,0
chr10	40205017	.	A	AT	4382.78	PASS	AB=1.000;AC=40;AF=0.714;AN=56;BaseQRankSum=-8.264;DP=375;FS=30.027;HRun=7;HaplotypeScore=140.2177;InbreedingCoeff=0.0294;MQ=76.37;MQ0=3;MQRankSum=3.558;QD=11.81;ReadPosRankSum=1.491;VQSLOD=2.1340;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:20:6.26:57,6,0	0/1:8,0:8:6.46:28,0,6	0/1:23,0:16:3.24:3,0,94	0/1:21,0:17:1.59:2,0,111	0/1:19,0:19:14.23:14,0,33	0/1:8,0:8:0.73:35,0,1	0/1:8,0:8:2.25:3,0,2	1/1:5,27:32:81.17:830,81,0	0/1:6,0:6:5.34:27,0,5	0/1:18,0:18:6.97:7,0,23	1/1:11,0:11:2.66:67,3,0	0/1:7,0:7:5.33:27,0,5	0/1:12,0:12:3.54:4,0,19	0/0:4,0:4:7.27:0,7,19	0/1:9,0:9:6.09:23,0,6	1/1:6,0:6:14.41:94,14,0	0/1:22,0:22:0.31:66,0,0	0/1:10,0:10:4.70:14,0,5	1/1:9,10:19:39.65:396,40,0	1/1:5,3:8:21.84:195,22,0	1/1:2,5:7:18:183,18,0	1/1:5,0:5:8.98:41,9,0	0/1:11,0:11:10.90:11,0,14	1/1:6,0:6:7.68:44,8,0	1/1:3,17:20:48.33:587,48,0	1/1:3,19:21:63.13:702,63,0	1/1:8,13:21:59.93:606,60,0	1/1:3,9:12:27.97:317,28,0
chr10	40205024	.	TAA	T	219.09	PASS	AB=0.885;AC=15;AF=0.268;AN=56;BaseQRankSum=-2.180;DP=367;FS=11.501;HRun=11;HaplotypeScore=162.8947;InbreedingCoeff=-0.0713;MQ=75.51;MQ0=3;MQRankSum=2.230;QD=1.60;ReadPosRankSum=-1.144;VQSLOD=0.2115;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:17,1:19:20.50:44,0,21	0/0:7,0:7:11.95:0,12,42	0/0:22,0:15:23.98:0,24,267	0/0:20,0:17:14.77:0,15,123	0/0:16,2:18:0.38:0,0,86	0/1:7,1:8:13.64:26,0,14	0/0:8,0:8:0.07:0,0,16	0/0:30,0:30:62.02:0,62,279	0/0:6,0:6:12.58:0,13,47	0/1:16,2:18:41.43:41,0,64	0/1:11,0:12:30.55:35,0,31	0/1:7,1:8:15.34:15,0,33	0/1:9,0:10:3.67:4,0,26	0/1:4,2:6:17.60:18,0,30	0/1:8,1:10:25.35:37,0,25	1/1:5,1:6:5.96:51,6,0	0/1:22,0:22:19.90:20,0,43	0/0:10,0:10:9.29:0,9,32	0/0:17,0:17:34.88:0,35,186	0/0:8,0:8:9.15:0,9,63	0/1:6,1:7:14.61:15,0,36	1/1:4,1:5:8.04:44,8,0	0/0:10,0:10:12.16:0,12,52	0/1:5,1:6:9.32:25,0,9	0/0:19,0:19:47.85:0,48,240	0/0:23,0:23:54.51:0,55,302	0/0:20,0:20:48.54:0,49,290	0/0:11,0:11:24.51:0,25,122
chr10	40205064	.	T	TAGTGCCTGGGG	53430.54	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-3.360;DP=463;FS=4.336;HRun=0;HaplotypeScore=151.8728;InbreedingCoeff=0.9676;MQ=65.36;MQ0=0;MQRankSum=-7.348;QD=121.43;ReadPosRankSum=2.121;VQSLOD=5.5743;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,12:24:36.12:1751,36,0	1/1:2,6:8:21.07:1077,21,0	0/0:16,0:16:39.13:0,39,1313	0/0:7,0:7:17.87:0,18,558	1/1:3,22:26:63.18:3605,63,0	1/1:4,5:9:27.09:1254,27,0	1/1:8,8:18:39.13:1949,39,0	1/1:19,6:25:69.23:3133,69,0	1/1:1,9:11:30.06:1456,30,0	1/1:8,15:25:69.20:3359,69,0	1/1:4,9:15:33.11:1763,33,0	1/1:5,9:14:42.10:1911,42,0	1/1:6,8:14:39.13:2054,39,0	1/1:4,15:19:51.17:2731,51,0	1/1:4,14:18:48.16:2649,48,0	1/1:4,6:11:30.10:1400,30,0	1/1:14,9:24:54.14:2576,54,0	1/1:6,9:16:42.14:2091,42,0	1/1:9,9:22:63.17:2791,63,0	1/1:3,5:8:21.07:1151,21,0	1/1:6,4:14:24.08:1130,24,0	1/1:10,7:17:23.95:1246,24,0	1/1:7,6:13:24.08:1174,24,0	1/1:8,4:13:12.04:604,12,0	1/1:3,15:17:45.15:2323,45,0	1/1:15,16:31:84.24:4074,84,0	1/1:4,16:21:63.22:3413,63,0	1/1:3,3:6:18.06:769,18,0
chr10	40205757	.	GT	G	1109.17	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.371;DP=583;FS=0.576;HRun=7;HaplotypeScore=58.3048;InbreedingCoeff=0.9643;MQ=66.56;MQ0=4;MQRankSum=0.547;QD=22.64;ReadPosRankSum=2.575;VQSLOD=3.7038;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,18:20:48.11:488,48,0	0/0:15,0:15:42.10:0,42,491	0/0:29,0:14:6.89:0,7,263	0/0:28,0:17:16.35:0,16,231	0/0:19,0:19:51.16:0,51,640	0/0:21,0:21:60.18:0,60,742	0/0:24,0:24:63.07:0,63,768	0/0:29,0:29:63.19:0,63,781	0/0:17,0:17:51.16:0,51,642	0/0:22,0:22:57.18:0,57,717	0/0:18,0:18:48.14:0,48,591	0/0:13,0:13:36.12:0,36,453	1/1:1,11:12:30.07:306,30,0	1/1:0,16:16:45.10:457,45,0	0/0:21,0:21:57.17:0,57,703	0/0:9,0:9:27.09:0,27,340	0/0:33,0:33:96.22:0,96,1159	0/0:31,0:31:90.29:0,90,1132	0/0:23,0:22:66.21:0,66,830	0/0:28,0:28:81.25:0,81,1007	0/0:18,0:18:48.14:0,48,590	0/0:17,0:17:48.15:0,48,604	0/0:17,0:17:48.15:0,48,601	0/0:20,0:20:48.15:0,48,604	0/0:21,0:21:63.19:0,63,782	0/0:23,0:22:66.21:0,66,828	0/0:24,0:24:72.19:0,72,881	0/0:14,0:14:33.03:0,33,376
chr10	40205923	.	T	TA	2257.89	PASS	AB=0.882;AC=17;AF=0.304;AN=56;BaseQRankSum=1.132;DP=533;FS=1.472;HRun=12;HaplotypeScore=102.2941;InbreedingCoeff=0.7101;MQ=74.22;MQ0=8;MQRankSum=-4.349;QD=10.26;ReadPosRankSum=-2.844;VQSLOD=2.5532;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:17:25.89:0,26,181	0/0:6,0:6:14.91:0,15,109	0/0:45,1:24:8.77:0,9,104	0/1:40,1:14:21.70:22,0,25	0/0:20,1:23:26.62:0,27,315	0/0:19,0:19:16.34:0,16,206	0/0:13,0:13:17.89:0,18,131	1/1:10,6:16:20.24:177,20,0	0/0:5,0:5:8.94:0,9,66	0/0:10,0:11:22.91:0,23,159	0/0:17,0:21:38.83:0,39,253	0/0:13,0:13:24.73:0,25,176	0/0:14,0:14:20.81:0,21,148	0/0:16,0:16:14.87:0,15,109	0/1:8,1:10:4.19:4,0,118	0/0:11,0:12:21.96:0,22,143	0/0:40,0:41:76.27:0,76,535	0/0:19,0:19:35.74:0,36,261	0/1:18,6:24:17.94:273,0,18	1/1:14,10:27:10.06:266,10,0	1/1:3,3:6:9.01:88,9,0	0/0:11,0:11:14.80:0,15,105	0/0:15,0:15:17.84:0,18,130	0/0:10,0:10:20.87:0,21,152	1/1:8,9:18:28.77:310,29,0	1/1:14,10:24:45:416,45,0	1/1:14,20:36:17.86:660,18,0	1/1:10,5:15:11.08:236,11,0
chr10	40205950	.	GT	G	2896.26	PASS	AB=0.641;AC=41;AF=0.732;AN=56;BaseQRankSum=-0.374;DP=530;FS=10.197;HRun=13;HaplotypeScore=78.1841;InbreedingCoeff=0.3617;MQ=64.51;MQ0=14;MQRankSum=-0.746;QD=7.54;ReadPosRankSum=4.121;VQSLOD=1.9026;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:17:11.67:0,12,80	1/1:2,4:6:11.93:88,12,0	0/0:57,1:16:1.02:0,1,104	0/0:47,0:12:8.60:0,9,57	0/1:10,10:22:13.59:190,0,14	1/1:4,14:19:5.62:195,6,0	0/1:2,9:12:4.20:95,0,4	1/1:7,1:21:24.64:93,25,0	1/1:0,1:1:2.98:22,3,0	1/1:5,12:17:37.32:265,37,0	0/1:7,7:15:29.23:130,0,29	1/1:4,6:11:1.09:96,1,0	0/0:3,0:10:8.64:0,9,47	0/0:4,0:13:14.24:0,14,71	1/1:4,9:13:26.80:196,27,0	0/1:7,6:13:14.38:73,0,14	1/1:10,19:31:48.64:334,49,0	0/1:11,10:21:54.71:142,0,55	1/1:9,2:29:39.50:142,39,0	1/1:4,0:17:20.32:59,20,0	1/1:3,1:9:7.03:34,7,0	1/1:3,14:17:0.54:168,1,0	1/1:2,14:17:37.80:268,38,0	1/1:3,6:9:11.89:88,12,0	1/1:2,0:17:28.51:82,29,0	1/1:2,0:21:36.31:117,36,0	1/1:7,0:32:40.69:118,41,0	1/1:5,0:14:21.27:71,21,0
chr10	40207999	.	GACAGGCAGACAGACACACACAC	G	777.89	PASS	AB=0.843;AC=6;AF=0.107;AN=56;BaseQRankSum=0.996;DP=556;FS=0.000;HRun=0;HaplotypeScore=263.6752;InbreedingCoeff=0.0331;MQ=44.35;MQ0=25;MQRankSum=-4.544;QD=6.17;ReadPosRankSum=-1.944;VQSLOD=1.9304;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:2,20:22:0:0,0,0	0/0:10,0:10:21:0,21,445	0/0:28,0:8:15.04:0,15,379	0/0:38,0:20:38.98:0,39,1366	0/0:15,0:15:18.06:0,18,323	0/0:18,0:18:16.80:0,17,274	0/0:28,0:27:12.01:0,12,160	0/1:32,0:29:99:186,0,667	0/0:27,0:27:27.05:0,27,1077	0/0:22,0:22:45.05:0,45,1723	0/0:8,0:8:5.23:0,5,59	0/0:16,0:16:9.03:0,9,204	0/1:2,14:17:99:345,0,405	0/0:1,11:12:0.36:0,0,1	0/0:25,0:24:44.01:0,44,1452	0/0:17,0:17:38.59:0,39,1063	0/0:21,0:20:57.06:0,57,1348	0/0:14,0:13:30.10:0,30,1184	0/1:29,0:26:99:207,0,220	0/0:18,0:18:11.64:0,12,465	0/0:21,0:20:15.52:0,16,420	0/0:14,0:14:12.14:0,12,194	0/0:11,0:11:16.98:0,17,1128	0/0:20,0:18:51.13:0,51,2614	0/0:26,0:26:24.42:0,24,412	0/0:20,0:20:15.70:0,16,1134	0/1:17,0:17:99:99,0,605	0/1:9,0:8:56.35:56,0,233
chr10	40208011	.	GACACACACAC	G	1691.19	PASS	AB=0.908;AC=14;AF=0.280;AN=50;BaseQRankSum=1.861;DP=532;FS=10.739;HRun=0;HaplotypeScore=174.4410;InbreedingCoeff=0.5054;MQ=39.95;MQ0=24;MQRankSum=-2.015;QD=10.64;ReadPosRankSum=2.858;VQSLOD=2.0553;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:21:0:0,0,0	0/0:11,0:11:9.03:0,9,207	0/0:24,0:4:6.02:0,6,218	0/0:24,0:10:15.05:0,15,612	./.	0/0:17,0:17:2.23:0,2,17	0/0:26,0:25:2.84:0,3,14	1/1:18,0:25:14.36:203,14,0	0/0:28,0:27:12.04:0,12,332	0/0:29,0:29:66.15:0,66,1539	0/1:8,0:8:0:0,0,0	0/1:14,0:13:0.32:0,0,0	0/1:17,0:17:93.73:133,0,94	0/0:11,0:11:0:0,0,1	0/0:27,0:26:10.61:0,11,259	0/0:16,0:16:20.63:0,21,365	0/0:22,0:21:32.11:0,32,668	0/0:17,0:16:30.05:0,30,588	0/1:8,11:18:36.04:771,0,36	0/0:9,9:18:1.82:0,2,5	./.	./.	0/0:14,0:14:14.81:0,15,382	0/0:21,0:17:24.08:0,24,705	1/1:19,0:25:1.15:2,1,0	1/1:14,6:20:11.98:257,12,0	1/1:18,1:20:12.04:231,12,0	1/1:4,4:7:9.03:236,9,0
chr10	40208013	.	C	CAGACAG	1471.28	PASS	AB=1.000;AC=28;AF=0.500;AN=56;BaseQRankSum=-0.241;DP=532;FS=3.912;HRun=0;HaplotypeScore=167.0319;InbreedingCoeff=0.1560;MQ=39.87;MQ0=24;MQRankSum=-0.437;QD=4.41;ReadPosRankSum=1.725;VQSLOD=2.7538;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:21:0:0,0,0	0/1:11,0:11:21:21,0,36	0/0:23,0:3:8.99:0,9,111	0/0:24,0:10:27.01:0,27,405	0/0:16,0:16:3.01:0,3,50	1/1:4,12:19:3.19:35,3,0	0/0:4,21:28:0.34:0,0,1	0/1:25,0:22:20.32:167,0,20	1/1:3,23:27:12.04:340,12,0	0/0:30,0:30:43.61:0,44,495	1/1:8,0:8:0.47:1,0,0	0/0:3,0:15:0.36:0,0,1	0/0:17,0:17:2.72:0,3,55	0/1:11,0:11:0.03:0,0,0	0/0:27,0:26:36.06:0,36,474	0/1:16,0:16:36.06:36,0,95	0/1:22,0:21:51.83:52,0,184	0/0:16,0:15:8.28:0,8,265	0/1:19,0:18:59.04:114,0,59	0/1:18,0:18:2.77:3,0,9	1/1:19,0:18:4.73:17,5,0	1/1:11,0:11:2.74:12,3,0	1/1:15,0:15:4.06:181,4,0	1/1:21,0:17:3.15:223,3,0	1/1:24,0:24:11.45:193,11,0	1/1:19,0:19:15.17:130,15,0	0/1:19,0:19:13.88:54,0,14	0/1:7,0:6:35.07:46,0,35
chr10	40208035	.	CAGAGAGAGAGAGAGAGAG	C	1476.97	PASS	AB=1.000;AC=9;AF=0.214;AN=42;BaseQRankSum=4.878;DP=423;FS=0.000;HRun=0;HaplotypeScore=165.7585;InbreedingCoeff=0.6906;MQ=36.51;MQ0=12;MQRankSum=-4.995;QD=18.01;ReadPosRankSum=3.508;VQSLOD=2.3986;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:26:5.05:0,5,370	./.	./.	./.	./.	0/0:16,0:17:16.49:0,16,550	0/0:21,0:19:9.50:0,10,370	0/0:12,0:12:17.27:0,17,355	0/0:20,0:19:18.06:0,18,790	1/1:19,0:22:9.01:403,9,0	./.	0/0:16,0:15:9.50:0,10,453	0/0:20,0:20:9.03:0,9,515	0/0:17,0:17:9.16:0,9,705	./.	1/1:9,4:15:12.04:553,12,0	1/1:14,2:15:6.02:246,6,0	1/1:6,4:9:9.03:403,9,0	0/0:17,0:16:9.03:0,9,405	0/0:11,0:11:3.48:0,3,61	0/1:19,0:18:0:0,0,0	./.	0/0:20,0:20:18.06:0,18,778	0/0:15,0:13:15.05:0,15,709	0/0:15,0:15:0:0,0,0	0/0:12,0:12:30.07:0,30,1401	0/0:16,0:16:21.07:0,21,1209	0/0:6,0:5:8.24:0,8,321
chr10	40208488	.	T	TCTCCCTCC	1199.77	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=0.149;DP=425;FS=1.099;HRun=0;HaplotypeScore=115.5262;InbreedingCoeff=0.7983;MQ=87.70;MQ0=1;MQRankSum=-3.517;QD=31.57;ReadPosRankSum=-1.525;VQSLOD=3.0887;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,9:17:12.04:469,12,0	0/0:2,0:2:6.02:0,6,154	0/0:22,0:20:3.01:0,3,32	0/0:32,0:30:8.91:0,9,308	0/0:14,0:14:21.06:0,21,479	0/0:22,0:22:57.16:0,57,1307	0/0:27,0:27:57.05:0,57,1014	0/0:30,0:30:39.10:0,39,769	0/0:12,0:12:21.07:0,21,508	0/0:18,0:18:39.13:0,39,934	0/0:9,0:9:18.06:0,18,431	0/0:19,0:19:39.13:0,39,1004	1/1:3,2:9:6.02:250,6,0	1/1:5,5:12:15.05:608,15,0	0/0:15,0:15:36.12:0,36,925	0/0:14,0:14:27.09:0,27,695	0/0:15,0:15:42.12:0,42,993	0/0:8,0:8:12.04:0,12,306	0/0:13,0:13:18.03:0,18,312	0/0:13,0:13:21.06:0,21,455	0/0:26,0:26:54.10:0,54,1287	0/0:10,0:10:15.05:0,15,386	0/0:8,0:8:12.04:0,12,267	0/0:11,0:11:23.11:0,23,513	0/0:12,0:12:21.07:0,21,538	0/0:17,0:17:36.12:0,36,925	0/0:11,0:11:24.08:0,24,616	0/0:7,0:7:18.02:0,18,312
chr10	40208923	.	C	CT	708.10	PASS	AB=0.782;AC=8;AF=0.143;AN=56;BaseQRankSum=7.447;DP=609;FS=0.000;HRun=2;HaplotypeScore=161.5770;InbreedingCoeff=-0.1718;MQ=45.44;MQ0=7;MQRankSum=-6.068;QD=3.87;ReadPosRankSum=0.915;VQSLOD=0.2503;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,4:34:4.25:0,4,266	0/0:8,0:8:6.01:0,6,65	0/0:23,0:11:29.61:0,30,340	0/0:11,0:9:18.06:0,18,222	0/0:22,0:22:20.64:0,21,228	0/1:19,13:32:88.81:152,0,89	0/1:22,3:24:5.20:5,0,179	0/0:32,0:32:88.73:0,89,943	0/1:15,9:24:34.61:219,0,35	0/0:28,0:29:62.22:0,62,704	0/0:18,0:18:20.99:0,21,235	0/1:17,7:24:88.87:95,0,89	0/1:14,6:20:38.12:135,0,38	0/1:14,7:21:77.25:110,0,77	0/0:22,0:22:9.01:0,9,95	0/1:16,1:17:3.05:3,0,157	0/0:22,0:22:38.22:0,38,418	0/0:18,0:18:47.41:0,47,495	0/0:31,0:26:48.16:0,48,642	0/0:18,0:18:52.81:0,53,456	0/0:15,0:15:42.05:0,42,475	0/0:14,0:14:18.02:0,18,207	0/1:11,9:20:33.37:116,0,33	0/0:29,0:29:9.94:0,10,208	0/0:19,0:19:54.96:0,55,487	0/0:26,0:24:67.85:0,68,689	0/0:29,0:28:81.61:0,82,713	0/0:6,0:5:12.04:0,12,147
chr10	40208926	.	C	CTTTCTTT	8828.65	PASS	AB=0.941;AC=26;AF=0.464;AN=56;BaseQRankSum=9.480;DP=609;FS=1.917;HRun=0;HaplotypeScore=187.1460;InbreedingCoeff=-0.6303;MQ=44.87;MQ0=7;MQRankSum=-6.701;QD=15.91;ReadPosRankSum=0.537;VQSLOD=3.9624;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:30,4:34:99:406,0,209	0/1:9,0:9:39.99:40,0,77	0/0:24,0:11:27.54:0,28,572	0/0:10,0:8:21.04:0,21,469	0/1:20,0:20:27.97:28,0,335	0/1:18,0:31:23.81:521,0,24	0/1:22,0:24:99:192,0,126	0/1:32,0:32:56.42:56,0,698	1/1:13,0:22:0.87:581,1,0	0/1:30,0:30:99:405,0,1075	0/1:18,0:18:72.08:72,0,352	0/1:17,7:24:45.75:784,0,46	0/1:17,6:23:37.68:771,0,38	1/1:15,7:22:15.28:1100,15,0	0/1:19,0:19:44.22:44,0,74	0/1:16,1:17:99:173,0,105	0/1:22,0:22:86.31:86,0,597	0/1:17,0:17:99:221,0,708	0/1:35,0:29:99:241,0,538	0/1:17,0:17:99:548,0,195	0/0:14,0:14:6.16:0,6,461	0/1:16,0:16:34.55:35,0,317	0/1:11,9:20:13.01:861,0,13	0/1:28,0:28:99:301,0,162	0/1:19,0:19:99:447,0,283	0/1:25,0:23:99:367,0,407	0/1:30,0:29:99:548,0,318	0/0:6,0:5:12.04:0,12,178
chr10	40208927	.	C	CT	586.66	PASS	AB=0.925;AC=11;AF=0.196;AN=56;BaseQRankSum=10.208;DP=612;FS=3.155;HRun=2;HaplotypeScore=161.7300;InbreedingCoeff=-0.2580;MQ=44.79;MQ0=7;MQRankSum=-6.751;QD=2.36;ReadPosRankSum=6.960;VQSLOD=-0.3137;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:38.63:0,39,396	0/0:9,0:9:6.01:0,6,65	0/0:23,0:10:24.05:0,24,277	0/0:11,0:8:14.23:0,14,217	0/0:20,0:20:17.94:0,18,197	0/1:31,0:31:99:114,0,141	0/0:25,0:24:7.26:0,7,254	0/0:34,0:34:77.25:0,77,410	0/1:21,0:21:75.33:132,0,75	0/0:30,0:30:66.21:0,66,724	0/0:18,0:18:21.02:0,21,239	0/1:23,0:23:46.92:47,0,149	0/1:23,0:23:48.03:105,0,48	0/1:22,0:22:83.49:83,0,118	0/0:19,0:19:6.01:0,6,65	0/1:17,0:17:2.18:2,0,114	0/0:22,0:22:32.66:0,33,359	0/0:17,0:17:43.37:0,43,450	0/0:34,2:30:7.86:0,8,364	0/1:10,7:17:60.41:60,0,97	0/0:14,0:14:11.66:0,12,164	0/0:16,0:16:18.04:0,18,210	0/1:20,0:20:49.49:89,0,49	0/0:29,0:29:42.77:0,43,331	0/1:14,5:19:29.64:30,0,125	0/1:21,5:24:12.78:13,0,159	0/1:24,6:29:53.09:53,0,228	0/0:6,0:5:11.36:0,11,56
chr10	40208930	.	C	CTTTCTTT	12766.42	PASS	AB=0.926;AC=30;AF=0.536;AN=56;BaseQRankSum=5.729;DP=616;FS=7.012;HRun=0;HaplotypeScore=178.8558;InbreedingCoeff=-0.3244;MQ=44.42;MQ0=7;MQRankSum=-4.684;QD=22.68;ReadPosRankSum=4.854;VQSLOD=3.2722;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:34,0:34:51.81:531,0,52	0/1:9,0:9:49.95:57,0,50	0/0:22,0:9:24.07:0,24,368	0/0:12,0:8:21.07:0,21,353	0/1:19,0:19:45.49:45,0,174	1/1:30,0:30:54.14:914,54,0	0/1:24,0:23:10.60:384,0,11	0/1:34,0:34:99:290,0,221	1/1:20,0:20:50.62:937,51,0	0/1:31,0:31:99:562,0,512	0/1:19,0:19:99:160,0,175	1/1:24,0:24:46.82:979,47,0	1/1:24,0:24:14.35:891,14,0	1/1:21,0:21:53.17:1261,53,0	0/1:20,0:20:38.53:59,0,39	0/1:16,0:16:34.86:223,0,35	0/1:21,0:21:99:200,0,276	0/1:17,0:17:99:344,0,311	0/1:36,2:32:99:527,0,338	0/1:11,7:18:40.45:768,0,40	0/0:13,0:13:3.22:0,3,171	0/1:3,0:21:49.39:49,0,170	1/1:20,0:20:12.05:933,12,0	0/1:29,0:29:30.53:423,0,31	0/1:14,5:19:99:645,0,116	0/1:21,5:24:72.23:628,0,72	0/1:23,6:28:23.78:958,0,24	0/0:6,0:5:11.70:0,12,70
chr10	40208934	.	T	TCTTTCTTTCTTTCTTC	14132.41	PASS	AB=1.000;AC=34;AF=0.607;AN=56;BaseQRankSum=-2.139;DP=636;FS=3.154;HRun=0;HaplotypeScore=270.7924;InbreedingCoeff=-0.2716;MQ=46.14;MQ0=7;MQRankSum=-2.446;QD=23.71;ReadPosRankSum=1.543;VQSLOD=3.4898;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:35,0:35:99:457,0,196	1/1:1,8:10:5.80:249,6,0	0/0:20,0:9:12:0,12,192	0/0:13,0:9:7.70:0,8,210	1/1:3,15:24:11.87:322,12,0	0/1:30,0:30:99:177,0,187	0/1:24,0:23:57.04:256,0,57	0/1:30,0:30:72.59:269,0,73	0/1:21,0:21:81.06:348,0,81	1/1:5,29:39:87.57:3512,88,0	1/1:2,17:20:20.83:632,21,0	0/1:24,0:24:18.84:599,0,19	0/1:21,0:21:16.90:516,0,17	1/1:21,0:21:28.62:1044,29,0	1/1:1,19:24:3.01:228,3,0	1/1:1,14:20:9.03:523,9,0	1/1:7,13:23:12.04:855,12,0	0/1:17,0:17:3.07:890,0,3	0/1:37,0:32:99:294,0,197	0/1:20,0:20:40.51:355,0,41	0/1:12,0:12:28.65:29,0,124	1/1:22,1:23:17.95:367,18,0	0/1:22,0:22:57.36:622,0,57	0/1:28,0:28:81.97:413,0,82	0/1:16,0:16:58.03:311,0,58	0/1:25,0:23:17.17:305,0,17	0/1:30,0:29:26.67:557,0,27	0/0:6,0:5:2.99:0,3,24
chr10	40208935	.	C	CTTTCTTTC	16735.40	PASS	AC=50;AF=0.926;AN=54;BaseQRankSum=0.827;DP=637;FS=14.091;HRun=0;HaplotypeScore=176.9494;InbreedingCoeff=0.6212;MQ=47.19;MQ0=8;MQRankSum=2.390;QD=28.08;ReadPosRankSum=2.574;VQSLOD=3.9241;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:36,0:36:43.78:656,44,0	1/1:10,0:10:2.72:100,3,0	0/0:21,0:8:6.02:0,6,88	0/0:14,0:10:7.29:0,7,99	1/1:23,0:23:5.93:99,6,0	1/1:29,0:29:65.94:773,66,0	1/1:24,0:23:43.20:572,43,0	1/1:28,0:28:45.12:606,45,0	1/1:23,0:23:51.17:744,51,0	1/1:38,0:38:57.23:1202,57,0	1/1:20,0:20:11.95:257,12,0	1/1:23,0:23:53.86:1202,54,0	1/1:16,5:22:39.08:1112,39,0	1/1:22,0:22:54.17:1433,54,0	1/1:24,0:24:3.01:100,3,0	1/1:21,0:21:9.03:324,9,0	1/1:23,0:23:12.04:370,12,0	1/1:18,0:18:17.79:270,18,0	1/1:36,0:31:53.78:839,54,0	1/1:20,0:20:38.95:1019,39,0	1/1:11,0:11:8.89:87,9,0	1/1:24,0:24:8.82:134,9,0	1/1:22,0:22:35.95:1159,36,0	1/1:28,0:28:35.83:508,36,0	1/1:16,0:16:30.03:820,30,0	1/1:25,0:23:49.24:974,49,0	1/1:30,0:29:68.95:1375,69,0	./.
chr10	40209870	.	C	CA	2536.20	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-11.036;DP=785;FS=2.922;HRun=2;HaplotypeScore=72.9751;InbreedingCoeff=0.9977;MQ=92.15;MQ0=0;MQRankSum=-0.582;QD=34.27;ReadPosRankSum=1.252;VQSLOD=4.0540;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:66,0:66:99:0,196,2400	0/0:13,0:13:39.10:0,39,468	0/0:30,0:30:78.23:0,78,950	0/0:34,0:34:78.14:0,78,889	0/0:35,0:35:99:0,99,1215	1/1:1,11:12:27.09:389,27,0	1/1:3,33:36:90.30:1296,90,0	0/0:24,0:24:72.22:0,72,882	1/1:0,26:26:69.23:994,69,0	0/0:40,0:40:99:0,111,1376	0/0:20,0:20:57.18:0,57,706	0/0:31,0:31:90.28:0,90,1116	0/0:27,0:27:75.22:0,75,916	0/0:35,0:35:96.30:0,96,1190	0/0:30,0:30:90.27:0,90,1103	0/0:22,1:23:26.01:0,26,775	0/0:33,0:33:99:0,99,1212	0/0:28,0:28:78.24:0,78,967	0/0:18,0:18:51.10:0,51,592	0/0:20,0:20:60.19:0,60,743	0/0:47,0:47:99:0,135,1645	0/0:26,0:26:78.25:0,78,967	0/0:18,0:18:54.17:0,54,669	0/0:34,0:34:99:0,99,1226	0/0:26,0:26:75.22:0,75,916	0/0:20,0:20:54.17:0,54,670	0/0:25,0:25:75.24:0,75,930	0/0:8,0:8:21.07:0,21,260
chr10	40210693	.	C	CACATAT	91.07	PASS	AB=0.979;AC=6;AF=0.200;AN=30;BaseQRankSum=1.354;DP=1401;FS=15.198;HRun=0;HaplotypeScore=38.1840;InbreedingCoeff=0.2579;MQ=11.65;MQ0=668;MQRankSum=1.571;QD=0.29;ReadPosRankSum=-1.752;VQSLOD=-0.1458;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	./.	./.	0/0:59,0:6:0:0,0,0	0/0:53,0:9:4.19:0,4,163	0/0:74,0:10:3.01:0,3,38	0/0:52,0:7:15.05:0,15,276	./.	./.	1/1:52,0:4:0.47:1,0,0	./.	0/0:60,0:14:0.47:0,0,1	0/0:59,0:18:9.03:0,9,212	0/1:43,2:6:62.26:160,0,62	0/0:43,0:3:9.03:0,9,212	0/0:31,0:10:30.10:0,30,477	./.	0/1:138,0:12:0.04:0,0,0	./.	./.	1/1:72,4:9:0.47:1,0,0	./.	0/0:61,0:10:6.99:0,7,328	0/0:30,0:11:3.01:0,3,43	0/0:18,0:2:5.93:0,6,51
chr10	40210833	.	C	CAG	1119.17	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-3.393;DP=1079;FS=15.503;HRun=0;HaplotypeScore=364.3676;InbreedingCoeff=0.9675;MQ=43.87;MQ0=132;MQRankSum=0.783;QD=10.08;ReadPosRankSum=-1.080;VQSLOD=2.3827;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:61,0:52:45.49:0,45,625	0/0:18,0:18:41.87:0,42,579	0/0:39,0:10:23.62:0,24,236	0/0:41,0:16:35.94:0,36,392	0/0:40,0:28:34.57:0,35,531	0/0:21,0:15:23.39:0,23,310	0/0:21,0:10:15.05:0,15,214	0/0:40,0:24:65.81:0,66,774	0/0:61,0:51:67.25:0,67,913	0/0:65,0:43:99:0,126,1634	0/0:25,0:19:27.24:0,27,369	1/1:18,25:32:40.32:699,40,0	0/0:36,0:29:60.08:0,60,790	0/0:27,0:23:38.44:0,38,505	0/0:42,0:35:34.11:0,34,512	0/0:50,0:46:56.84:0,57,770	0/0:21,0:15:35.98:0,36,444	0/0:43,0:33:57.09:0,57,748	0/0:23,0:17:42.04:0,42,535	0/0:42,0:36:71.45:0,71,1003	0/0:93,0:74:99:0,108,1386	0/0:40,0:34:49.62:0,50,672	1/1:16,25:29:8.52:186,9,0	1/1:14,13:19:22.86:370,23,0	0/0:30,0:23:41.66:0,42,542	0/0:37,0:33:96.10:0,96,1255	0/0:38,0:37:85.18:0,85,1174	0/0:13,0:12:33.09:0,33,448
chr10	40210863	.	CATAT	C	25832.51	PASS	AB=0.519;AC=51;AF=0.911;AN=56;BaseQRankSum=5.675;DP=982;FS=30.001;HRun=0;HaplotypeScore=376.1921;InbreedingCoeff=0.8740;MQ=48.09;MQ0=15;MQRankSum=2.994;QD=28.20;ReadPosRankSum=7.197;VQSLOD=3.2389;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,43:47:53.72:1186,54,0	1/1:0,20:20:41.51:785,42,0	0/0:30,0:19:47.70:0,48,894	0/0:36,0:25:74.92:0,75,1623	1/1:3,36:38:30.68:601,31,0	1/1:4,14:17:26.68:513,27,0	0/1:1,13:13:0:0,0,0	1/1:3,24:27:72.14:1150,72,0	1/1:2,56:55:76.95:1532,77,0	1/1:4,49:52:99:2420,129,0	1/1:1,28:29:33.03:625,33,0	1/1:7,28:35:35.97:633,36,0	1/1:2,40:41:69.23:1307,69,0	1/1:1,32:33:32.46:647,32,0	1/1:0,48:48:36.68:719,37,0	1/1:1,50:51:93.13:1787,93,0	1/1:1,13:14:36.06:676,36,0	1/1:1,30:30:54.18:1051,54,0	1/1:3,15:14:39.13:715,39,0	1/1:3,36:38:53.53:1054,54,0	1/1:13,90:99:99:2587,132,0	1/1:4,34:38:44.27:898,44,0	1/1:0,32:32:12.04:240,12,0	1/1:1,22:23:6.02:120,6,0	1/1:0,23:23:38.78:778,39,0	1/1:0,33:32:96.33:1810,96,0	1/1:3,31:34:72.05:1426,72,0	1/1:3,10:13:30.10:572,30,0
chr10	40210945	.	TAC	T	8622.94	PASS	AB=0.818;AC=17;AF=0.304;AN=56;BaseQRankSum=9.127;DP=1092;FS=1.341;HRun=0;HaplotypeScore=208.7940;InbreedingCoeff=0.9146;MQ=51.52;MQ0=25;MQRankSum=3.647;QD=25.14;ReadPosRankSum=-0.889;VQSLOD=5.2440;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:90.05:0,90,1512	0/0:13,0:13:27.09:0,27,463	0/0:60,1:22:47.92:0,48,618	0/0:64,0:23:37.56:0,38,606	0/0:31,0:31:23.81:0,24,382	0/1:14,4:16:19.59:20,0,46	0/0:20,0:19:21.05:0,21,336	1/1:20,38:50:86.58:1061,87,0	0/0:22,6:26:21.07:0,21,363	0/0:58,0:58:99:0,146,2331	0/0:26,0:25:38.98:0,39,658	0/0:43,0:43:71.33:0,71,1163	0/0:45,0:44:77.90:0,78,1311	0/0:27,0:27:37.26:0,37,669	0/0:54,0:54:77.78:0,78,1350	0/0:42,0:42:63.14:0,63,1080	0/0:29,0:27:64.46:0,64,1124	0/0:24,0:24:60.06:0,60,931	1/1:24,12:28:48.08:635,48,0	1/1:4,11:15:33.11:439,33,0	1/1:25,78:100:99:2850,218,0	0/0:43,0:43:72.04:0,72,1229	0/0:29,0:29:60.19:0,60,1005	0/0:69,0:67:99:0,123,2070	1/1:1,17:18:42.14:558,42,0	1/1:13,26:37:52.44:1083,52,0	1/1:8,24:32:84.19:1075,84,0	1/1:1,23:24:69.22:903,69,0
chr10	40210980	.	ACT	A	479.16	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=4.307;DP=1123;FS=0.000;HRun=0;HaplotypeScore=251.1220;InbreedingCoeff=0.9818;MQ=53.02;MQ0=29;MQRankSum=1.051;QD=7.05;ReadPosRankSum=-5.098;VQSLOD=1.8907;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,117,2017	0/0:12,0:12:30.10:0,30,520	0/0:60,0:20:46.87:0,47,608	0/0:62,0:22:19.29:0,19,481	0/0:33,0:33:21.50:0,22,331	1/1:9,14:19:11.52:134,12,0	1/1:10,9:17:23.97:218,24,0	0/0:49,0:46:99:0,135,2219	1/1:11,15:24:21.58:266,22,0	0/0:61,0:61:99:0,171,2988	0/0:37,0:36:50.82:0,51,795	0/0:43,0:43:74.51:0,75,1324	0/0:33,0:32:51.29:0,51,1203	0/0:25,0:25:39.95:0,40,672	0/0:52,0:52:99:0,102,1789	0/0:37,0:37:86.96:0,87,1493	0/0:38,0:36:75.11:0,75,1212	0/0:21,0:22:51.87:0,52,998	0/0:28,0:23:60.03:0,60,903	0/0:26,0:26:69.11:0,69,1207	0/0:92,0:92:99:0,217,3891	0/0:46,0:46:69.23:0,69,1108	0/0:34,0:34:80.98:0,81,1344	0/0:78,0:76:99:0,155,2718	0/0:33,0:33:93.24:0,93,1611	0/0:34,0:32:90.31:0,90,1638	0/0:48,0:48:99:0,132,2257	0/0:25,0:25:72.21:0,72,1255
chr10	40211021	.	TAC	T	8479.74	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=7.906;DP=1135;FS=4.435;HRun=0;HaplotypeScore=251.5494;InbreedingCoeff=0.9956;MQ=50.48;MQ0=30;MQRankSum=0.851;QD=19.45;ReadPosRankSum=5.174;VQSLOD=4.5955;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,101,1666	1/1:3,7:10:15.05:193,15,0	0/0:54,0:12:21.07:0,21,305	0/0:64,0:26:47.78:0,48,666	1/1:3,42:45:18.01:213,18,0	1/1:3,22:24:24.06:309,24,0	1/1:6,23:28:39:502,39,0	0/0:64,0:61:99:0,147,2291	1/1:10,30:34:40.03:554,40,0	1/1:6,62:68:99:2231,183,0	1/1:2,35:36:45.14:579,45,0	0/0:41,0:41:56.89:0,57,893	0/0:33,0:33:75.05:0,75,1177	0/0:23,0:22:44.70:0,45,729	1/1:4,44:48:81.26:1042,81,0	1/1:2,37:39:81.26:1042,81,0	1/1:7,25:30:47.24:684,47,0	1/1:4,16:20:55.68:667,56,0	0/0:26,0:22:60.20:0,60,979	0/0:36,0:36:99:0,99,1620	0/0:77,0:76:99:0,169,2801	1/1:5,37:43:36.12:463,36,0	0/0:37,1:38:75.13:0,75,1210	0/0:59,1:60:99:0,114,1888	0/0:42,0:42:99:0,114,1896	0/0:26,1:25:27.59:0,28,992	0/0:49,0:49:99:0,123,1979	0/0:20,0:19:48.16:0,48,770
chr10	40211966	.	A	AC	2417.20	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-9.038;DP=744;FS=2.787;HRun=6;HaplotypeScore=73.3546;InbreedingCoeff=0.9986;MQ=87.23;MQ0=0;MQRankSum=-3.824;QD=28.78;ReadPosRankSum=0.179;VQSLOD=4.2529;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,30:34:84.27:1057,84,0	0/0:9,0:9:27.06:0,27,275	0/0:31,0:31:75.84:0,76,730	0/0:26,0:26:23.77:0,24,481	0/0:18,0:18:51.12:0,51,519	0/0:22,0:22:63.14:0,63,643	0/0:21,0:21:54.12:0,54,551	0/0:22,0:22:54.07:0,54,535	0/0:22,0:22:60.13:0,60,612	0/0:29,0:28:69.14:0,69,700	0/0:31,0:31:78.14:0,78,782	0/0:40,0:40:99:0,108,1101	1/1:3,22:25:57.18:717,57,0	1/1:4,21:25:63.20:786,63,0	0/0:34,0:34:93.19:0,93,942	0/0:16,0:16:45.10:0,45,459	0/0:42,0:42:99:0,126,1285	0/0:26,0:26:72.13:0,72,725	0/0:14,0:14:39.07:0,39,391	0/0:23,0:23:66.14:0,66,672	0/0:47,0:47:99:0,114,1162	0/0:35,0:35:96.21:0,96,978	0/0:21,0:21:54.10:0,54,543	0/0:31,0:31:90.21:0,90,918	0/0:18,0:18:51.12:0,51,520	0/0:39,0:39:99:0,111,1128	0/0:33,0:33:96.20:0,96,971	0/0:10,0:10:30.05:0,30,299
chr10	40212074	.	TG	T	2728.42	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.185;DP=825;FS=0.000;HRun=2;HaplotypeScore=88.4609;InbreedingCoeff=0.9992;MQ=80.14;MQ0=0;MQRankSum=-5.783;QD=33.27;ReadPosRankSum=1.779;VQSLOD=3.6792;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,132,1953	0/0:12,0:12:36.12:0,36,536	0/0:31,0:31:90.29:0,90,1280	0/0:21,0:21:63.16:0,63,867	0/0:21,0:21:60.20:0,60,894	1/1:0,22:22:57.19:740,57,0	1/1:0,31:31:87.28:1126,87,0	0/0:43,0:43:99:0,129,1912	1/1:0,29:29:78.25:1006,78,0	0/0:40,0:40:99:0,111,1644	0/0:34,0:34:99:0,102,1526	0/0:32,0:32:96.28:0,96,1393	0/0:29,0:29:87.29:0,87,1300	0/0:31,0:31:75.24:0,75,1103	0/0:36,0:36:99:0,105,1551	0/0:28,0:28:81.27:0,81,1194	0/0:30,0:30:90.28:0,90,1325	0/0:21,0:21:63.17:0,63,919	0/0:28,0:27:75.18:0,75,1038	0/0:27,0:27:78.26:0,78,1167	0/0:47,0:47:99:0,141,2087	0/0:34,0:34:99:0,102,1504	0/0:29,0:29:69.23:0,69,1025	0/0:32,0:32:87.29:0,87,1289	0/0:27,0:27:78.26:0,78,1148	0/0:35,0:35:96.32:0,96,1435	0/0:23,0:23:69.23:0,69,1033	0/0:8,0:8:24.08:0,24,360
chr10	40212152	.	CTG	C	2625.31	PASS	AB=0.844;AC=7;AF=0.125;AN=56;BaseQRankSum=8.030;DP=1051;FS=7.025;HRun=0;HaplotypeScore=176.5522;InbreedingCoeff=0.8127;MQ=59.51;MQ0=12;MQRankSum=1.234;QD=18.11;ReadPosRankSum=0.107;VQSLOD=3.2545;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:29,32:58:99:1524,126,0	0/0:18,0:18:50.95:0,51,775	0/0:52,0:31:58.69:0,59,821	0/0:43,0:26:41.34:0,41,588	0/0:30,0:30:69.22:0,69,1099	0/1:10,5:27:11.80:12,0,181	0/0:14,1:26:33.27:0,33,276	0/0:55,0:55:80.78:0,81,1542	0/0:19,8:51:50.93:0,51,438	0/0:64,0:64:99:0,172,2774	0/0:27,1:28:72.02:0,72,1118	0/0:17,0:29:33.87:0,34,291	1/1:4,23:26:45.14:563,45,0	1/1:2,28:30:54.05:675,54,0	0/0:44,0:44:99:0,114,1872	0/0:23,1:24:25.55:0,26,878	0/0:29,0:28:69.24:0,69,1134	0/0:22,0:22:31.53:0,32,635	0/0:35,0:34:67.10:0,67,1235	0/0:30,1:31:40.74:0,41,1194	0/0:88,2:91:99:0,159,3348	0/0:32,0:32:81.28:0,81,1333	0/0:12,0:30:32.39:0,32,262	0/0:15,6:38:31.18:0,31,255	0/0:38,0:37:93.30:0,93,1491	0/0:41,0:41:99:0,114,1818	0/0:27,1:28:48.35:0,48,1103	0/0:13,0:13:5.33:0,5,98
chr10	40212168	.	A	ATG	80.37	PASS	AB=1.000;AC=10;AF=0.179;AN=56;BaseQRankSum=8.122;DP=1092;FS=28.222;HRun=0;HaplotypeScore=192.4687;InbreedingCoeff=0.5684;MQ=53.32;MQ0=15;MQRankSum=-2.644;QD=0.40;ReadPosRankSum=-0.882;VQSLOD=1.2707;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:55:99:0,123,1483	0/0:18,0:18:45.15:0,45,590	0/0:61,0:31:63.24:0,63,771	0/0:46,0:24:48.48:0,48,597	0/0:27,0:27:66.18:0,66,836	0/1:29,0:28:18.69:19,0,24	1/1:37,0:35:1.98:5,2,0	0/0:53,0:51:99:0,126,1538	1/1:57,0:51:4.04:78,4,0	0/0:65,0:65:99:0,162,2031	0/0:31,0:31:78.23:0,78,1006	1/1:32,0:31:6.30:61,6,0	0/0:28,0:27:54.13:0,54,650	0/0:36,0:36:72.19:0,72,867	0/0:46,0:46:99:0,126,1610	0/0:27,0:27:69.19:0,69,868	0/0:28,0:27:81.23:0,81,1030	0/0:20,1:21:23.72:0,24,592	0/0:37,0:35:84.15:0,84,1061	0/0:34,0:34:78.24:0,78,1022	0/0:93,3:97:99:0,238,3055	0/0:36,0:36:99:0,102,1290	0/0:32,0:29:1.26:0,1,10	1/1:36,0:32:7.53:35,8,0	0/0:37,0:36:93.10:0,93,1164	0/0:43,0:43:99:0,102,1339	0/0:27,0:27:75.21:0,75,953	0/1:12,0:12:17.94:18,0,138
chr10	40212182	.	GTGTCTGTGTATC	G	995.31	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=6.945;DP=1063;FS=11.133;HRun=0;HaplotypeScore=351.2641;InbreedingCoeff=0.7481;MQ=53.46;MQ0=15;MQRankSum=-3.252;QD=4.50;ReadPosRankSum=-1.723;VQSLOD=0.0589;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:59,0:56:99:0,111,5525	0/0:18,0:18:45.14:0,45,1730	0/0:54,0:24:49.38:0,49,1297	0/0:49,0:26:42.45:0,42,1012	0/0:25,0:25:57.20:0,57,2640	1/1:14,12:25:2.42:48,2,0	1/1:21,11:30:6.01:79,6,0	0/0:49,0:46:75.26:0,75,3010	1/1:32,21:47:27.02:619,27,0	0/0:61,0:61:99:0,113,5965	0/0:33,0:33:72.25:0,72,3412	1/1:12,13:24:15.05:338,15,0	0/0:32,0:31:51.16:0,51,2424	0/0:31,0:31:71.79:0,72,3620	0/0:51,0:51:99:0,126,5446	0/0:27,0:27:66.23:0,66,3466	0/0:29,0:28:74.28:0,74,3220	0/1:23,0:23:17.02:17,0,2541	0/0:31,0:29:54.19:0,54,2606	0/0:35,0:35:64.57:0,65,3022	0/0:97,0:97:99:0,189,8704	0/0:38,0:38:93.31:0,93,3903	1/1:19,9:28:0.47:1,0,0	1/1:27,7:32:3.01:48,3,0	0/0:37,0:36:75.26:0,75,3554	0/0:40,0:40:87.29:0,87,4128	0/0:32,0:32:78.27:0,78,3705	0/0:13,0:13:20.83:0,21,1188
chr10	40212202	.	GTA	G	91.42	PASS	AB=0.884;AC=7;AF=0.125;AN=56;BaseQRankSum=6.464;DP=1080;FS=18.671;HRun=0;HaplotypeScore=174.8442;InbreedingCoeff=0.4191;MQ=53.61;MQ0=15;MQRankSum=-3.597;QD=0.57;ReadPosRankSum=-1.072;VQSLOD=1.4078;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:53:99:0,137,2526	0/0:16,0:16:45.61:0,46,832	0/0:53,0:29:82.47:0,82,1445	0/0:61,1:32:70.95:0,71,1023	0/0:27,0:27:81.26:0,81,1516	1/1:22,5:26:2.27:23,2,0	0/0:32,4:36:2.51:0,3,50	0/0:43,0:41:99:0,111,2105	0/1:42,7:44:57.71:59,0,58	0/0:57,0:56:99:0,160,3014	0/0:34,0:34:84.10:0,84,1508	0/1:22,4:25:54.22:99,0,54	0/0:31,0:30:63.20:0,63,1161	0/0:36,0:36:96.33:0,96,1852	0/0:52,0:52:99:0,154,2896	0/0:32,0:32:96.32:0,96,1820	0/0:35,0:34:92.38:0,92,1851	0/0:28,0:28:59.96:0,60,1206	0/0:26,0:23:63.22:0,63,1212	0/0:30,0:30:73.96:0,74,1389	0/0:95,0:95:99:0,237,4418	0/0:39,0:39:99:0,114,2155	0/1:22,2:24:0:0,0,0	1/1:30,2:30:2.99:24,3,0	0/0:36,0:35:84.29:0,84,1570	0/0:45,0:45:99:0,132,2397	0/0:31,0:31:93.32:0,93,1744	0/0:19,0:19:28.41:0,28,829
chr10	40212220	.	ATG	A	569.58	PASS	AC=10;AF=0.185;AN=54;BaseQRankSum=7.914;DP=1076;FS=0.000;HRun=0;HaplotypeScore=155.6436;InbreedingCoeff=0.8931;MQ=53.37;MQ0=25;MQRankSum=-5.365;QD=3.80;ReadPosRankSum=-2.055;VQSLOD=2.0623;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:62,1:62:99:0,137,2194	0/0:14,0:14:27.09:0,27,431	0/0:56,0:21:32.60:0,33,602	0/0:70,0:27:32.66:0,33,616	0/0:23,0:23:69.18:0,69,1078	1/1:5,20:24:5.95:75,6,0	1/1:10,28:37:5.55:78,6,0	0/0:41,0:41:93.23:0,93,1402	1/1:9,37:42:30.55:375,31,0	0/0:57,0:56:99:0,141,2365	0/0:31,0:31:77.61:0,78,1197	1/1:2,18:19:10.55:152,11,0	0/0:32,0:31:57.18:0,57,927	0/0:41,0:41:99:0,102,1706	0/0:46,0:46:99:0,126,1997	0/0:33,0:33:93.29:0,93,1530	0/0:35,0:34:77.35:0,77,1392	0/0:28,0:28:73.78:0,74,1157	0/0:29,0:24:63.11:0,63,970	0/0:33,0:33:72.21:0,72,1156	0/0:90,0:90:99:0,207,3215	0/0:32,0:32:90.31:0,90,1515	1/1:2,19:21:3.48:40,3,0	./.	0/0:33,0:32:63.21:0,63,1048	0/0:49,0:49:99:0,138,2275	0/0:32,0:32:84.26:0,84,1366	0/0:25,0:25:61.06:0,61,963
chr10	40212252	.	CTG	C	1956.16	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=10.179;DP=1062;FS=0.000;HRun=0;HaplotypeScore=140.5913;InbreedingCoeff=0.9873;MQ=53.12;MQ0=15;MQRankSum=-0.252;QD=9.32;ReadPosRankSum=-0.823;VQSLOD=3.0880;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,128,2106	0/0:14,0:14:38.88:0,39,654	0/0:52,0:25:56.10:0,56,820	0/0:57,0:20:36.12:0,36,581	0/0:21,0:21:63.18:0,63,1017	1/1:6,23:27:27.43:350,27,0	1/1:9,29:37:23.74:312,24,0	0/0:49,0:48:99:0,114,1797	1/1:16,35:44:42.08:506,42,0	0/0:52,0:52:99:0,144,2379	0/0:28,0:28:63.22:0,63,1061	1/1:5,26:30:31.62:426,32,0	0/0:31,0:31:81.22:0,81,1283	0/0:39,0:39:93.30:0,93,1543	0/0:49,0:49:99:0,138,2265	0/0:28,0:28:72.23:0,72,1193	0/0:36,0:36:99:0,99,1654	0/0:31,0:31:84.07:0,84,1302	0/0:28,0:28:69.20:0,69,1074	0/0:30,0:30:55.13:0,55,1103	0/0:92,0:91:99:0,207,3430	0/0:36,0:36:87.28:0,87,1427	1/1:2,17:18:9.03:117,9,0	1/1:8,34:39:33.11:429,33,0	0/0:26,0:26:45.14:0,45,739	0/0:51,0:51:99:0,135,2148	0/0:27,0:27:75.26:0,75,1273	0/0:22,0:22:60.20:0,60,1008
chr10	40212332	.	CTGTG	C	2088.04	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=8.009;DP=1240;FS=5.648;HRun=0;HaplotypeScore=206.7002;InbreedingCoeff=0.9001;MQ=52.21;MQ0=39;MQRankSum=1.975;QD=11.54;ReadPosRankSum=3.232;VQSLOD=2.8793;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:59,0:57:99:0,111,2504	0/0:16,0:16:41.86:0,42,896	0/1:34,0:3:1.08:1,0,103	0/0:58,0:13:29.20:0,29,466	0/0:33,0:33:90.27:0,90,2180	0/0:37,0:33:41.78:0,42,975	0/0:65,0:61:95.62:0,96,2132	0/0:45,0:30:78.23:0,78,1869	0/0:71,0:66:99:0,110,2606	0/0:64,0:63:99:0,172,4126	0/0:36,0:35:84.28:0,84,2051	1/1:11,29:39:29.91:510,30,0	0/0:44,0:44:99:0,123,2968	0/0:45,0:45:99:0,114,2768	0/0:61,0:60:99:0,172,4352	0/0:23,0:23:60.21:0,60,1528	0/0:42,0:41:99:0,114,2791	0/0:42,0:42:99:0,114,2572	0/0:30,0:16:42.14:0,42,1036	0/0:32,0:31:72.70:0,73,1770	0/0:92,0:89:99:0,197,4676	0/0:40,0:38:96.31:0,96,2387	1/1:19,20:35:36.11:632,36,0	1/1:28,40:67:59.99:1087,60,0	0/0:35,0:35:98.67:0,99,2411	0/0:51,0:49:99:0,132,3221	0/0:29,0:29:78.23:0,78,1859	0/0:9,0:9:18.06:0,18,453
chr10	40212410	.	CTG	C	51.98	PASS	AB=0.981;AC=8;AF=0.143;AN=56;BaseQRankSum=6.984;DP=963;FS=6.255;HRun=0;HaplotypeScore=119.9312;InbreedingCoeff=0.5488;MQ=49.83;MQ0=75;MQRankSum=-0.660;QD=0.44;ReadPosRankSum=1.203;VQSLOD=1.8338;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,1:30:48.64:0,49,806	0/0:9,0:9:27.08:0,27,428	0/0:33,0:4:2.99:0,3,23	0/0:34,0:4:3:0,3,28	0/0:32,0:32:69.21:0,69,1132	1/1:8,0:8:5.44:24,5,0	0/1:23,1:20:25.10:25,0,40	0/0:66,0:52:99:0,108,1817	0/1:40,0:40:4.69:26,0,5	0/0:65,0:62:99:0,175,2822	0/0:31,0:30:81.25:0,81,1314	1/1:27,0:26:8.15:56,8,0	0/0:37,0:37:36.08:0,36,581	0/0:39,0:39:27.08:0,27,406	0/0:55,0:55:99:0,135,2251	0/0:27,0:27:57.15:0,57,1111	0/0:42,0:41:99:0,102,1690	0/0:39,1:39:81.70:0,82,1632	0/0:38,1:24:30.19:0,30,1034	0/0:26,0:26:66.18:0,66,1047	0/0:82,0:80:99:0,168,2828	0/0:36,0:34:84.23:0,84,1338	1/1:16,0:15:4.75:52,5,0	0/0:20,0:20:5.31:0,5,31	0/0:24,0:24:66.20:0,66,1068	0/0:37,0:35:87.27:0,87,1406	0/0:31,1:32:39.30:0,39,1225	0/0:5,0:5:15.05:0,15,255
chr10	40212416	.	GTGTGTC	G	1321.82	PASS	AC=12;AF=0.231;AN=52;BaseQRankSum=4.326;DP=974;FS=16.523;HRun=0;HaplotypeScore=170.3942;InbreedingCoeff=0.9504;MQ=49.25;MQ0=84;MQRankSum=1.152;QD=9.37;ReadPosRankSum=-3.356;VQSLOD=0.6931;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:31:48.95:0,49,1309	0/0:9,0:9:24.08:0,24,773	./.	./.	0/0:30,0:30:72.25:0,72,2308	1/1:6,4:9:6.02:132,6,0	1/1:16,9:20:14.96:265,15,0	0/0:65,0:47:93.42:0,93,3061	1/1:19,21:37:29.57:370,30,0	0/0:65,0:62:99:0,181,5253	0/0:33,0:32:87.23:0,87,2393	1/1:8,17:24:14.94:340,15,0	0/0:37,0:37:25.85:0,26,814	0/0:38,0:38:23.81:0,24,489	0/0:55,0:55:99:0,144,4329	0/0:30,0:29:64.74:0,65,2280	0/0:43,0:42:99:0,102,3313	0/0:42,0:42:99:0,114,2948	0/0:39,0:24:69.23:0,69,1817	0/0:26,0:26:63.18:0,63,1787	0/0:86,0:83:99:0,177,5324	0/0:37,0:35:84.22:0,84,2449	1/1:14,6:17:15.04:280,15,0	1/1:14,7:20:8.94:108,9,0	0/0:25,0:25:69.22:0,69,2076	0/0:35,0:32:90.31:0,90,2756	0/0:30,0:30:78.27:0,78,2342	0/0:5,0:5:15.05:0,15,526
chr10	40212420	.	GTC	G	429.33	PASS	AC=12;AF=0.231;AN=52;BaseQRankSum=8.377;DP=976;FS=10.315;HRun=0;HaplotypeScore=121.1232;InbreedingCoeff=0.9438;MQ=49.11;MQ0=79;MQRankSum=0.147;QD=3.13;ReadPosRankSum=-4.015;VQSLOD=-0.0890;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:30:48.60:0,49,856	0/0:8,0:8:24.08:0,24,451	./.	./.	0/0:31,0:31:78.22:0,78,1382	1/1:11,1:10:5.96:44,6,0	1/1:22,0:18:14.59:111,15,0	0/0:62,0:44:96.30:0,96,1951	1/1:36,2:35:29.70:212,30,0	0/0:66,0:62:99:0,185,3164	0/0:33,0:32:89.52:0,90,1435	1/1:27,0:27:13.59:86,14,0	0/0:38,0:38:23.07:0,23,594	0/0:41,0:41:23.89:0,24,370	0/0:56,0:56:99:0,156,2603	0/0:31,1:31:54.41:0,54,1359	0/0:45,0:44:99:0,109,1982	0/0:43,0:42:99:0,104,1845	0/0:39,0:25:57.81:0,58,1133	0/0:28,0:28:71.35:0,71,1090	0/0:86,0:83:99:0,180,3188	0/0:37,0:35:87:0,87,1491	1/1:17,2:16:13.15:102,13,0	1/1:19,0:19:7.96:46,8,0	0/0:27,0:27:72.20:0,72,1248	0/0:37,0:34:99:0,102,1687	0/0:28,0:28:63.18:0,63,1434	0/0:5,0:5:15.05:0,15,289
chr10	40212428	.	GTCTGTGTGTGTGTCTGTGTA	G	533.86	PASS	AB=0.778;AC=16;AF=0.308;AN=52;BaseQRankSum=5.307;DP=997;FS=0.753;HRun=0;HaplotypeScore=398.1289;InbreedingCoeff=0.7255;MQ=49.29;MQ0=83;MQRankSum=2.656;QD=2.09;ReadPosRankSum=-4.817;VQSLOD=0.3713;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:37,0:34:26.98:307,27,0	0/0:8,0:8:21.07:0,21,740	./.	./.	0/0:36,0:35:75.23:0,75,2859	1/1:14,0:11:5.99:49,6,0	1/1:24,0:17:2.80:17,3,0	0/0:69,0:50:99:0,105,1273	0/1:32,0:29:57.35:57,0,110	0/0:65,0:60:99:0,126,4647	0/0:31,0:30:74.82:0,75,2761	1/1:29,0:29:12.04:78,12,0	1/1:10,30:40:2.49:120,2,0	0/1:9,35:44:0:0,0,0	0/0:56,0:56:99:0,138,5341	0/0:35,0:34:81.16:0,81,2870	0/0:45,0:44:99:0,107,4855	0/0:41,0:40:53.32:0,53,2856	0/0:41,0:25:52.23:0,52,1521	0/0:25,0:25:60.15:0,60,2099	0/0:96,0:92:99:0,171,6158	0/0:34,0:32:66.17:0,66,2225	1/1:18,0:16:5.98:46,6,0	1/1:18,0:18:2.99:23,3,0	0/0:26,0:26:54.17:0,54,2234	0/0:40,0:37:77.30:0,77,2747	0/0:31,0:30:41.55:0,42,1545	0/0:5,0:5:15.05:0,15,543
chr10	40212454	.	GTGTGTGTC	G	61.93	PASS	AB=1.000;AC=5;AF=0.093;AN=54;BaseQRankSum=4.164;DP=1024;FS=15.069;HRun=0;HaplotypeScore=213.1739;InbreedingCoeff=0.6768;MQ=49.15;MQ0=70;MQRankSum=-0.137;QD=0.76;ReadPosRankSum=-2.035;VQSLOD=1.1014;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:40:60.12:0,60,1712	0/0:13,0:13:30.09:0,30,929	0/0:35,0:3:9.03:0,9,232	0/0:46,0:7:21.07:0,21,422	0/0:31,0:30:69.24:0,69,2652	0/0:13,0:10:6.02:0,6,196	0/0:25,0:20:11.96:0,12,205	0/0:57,0:48:99:0,102,3004	0/0:38,0:35:39.13:0,39,843	0/0:61,0:59:99:0,150,4688	0/0:34,0:33:87.29:0,87,2781	1/1:14,16:30:7.48:126,7,0	0/1:32,0:32:1.14:1,0,133	0/0:39,0:39:12.04:0,12,275	0/0:65,0:65:99:0,147,5153	0/0:39,0:37:87.28:0,87,3187	0/0:46,0:45:99:0,117,4280	0/0:39,0:39:99:0,105,3277	0/0:48,0:26:57.20:0,57,1713	0/0:29,0:29:57.19:0,57,2114	0/0:88,0:85:99:0,198,7129	0/0:33,0:32:75.24:0,75,2389	./.	1/1:13,7:20:5.87:36,6,0	0/0:29,0:29:78.24:0,78,2433	0/0:43,0:39:87.29:0,87,2801	0/0:24,0:23:50.47:0,50,1757	0/0:7,0:7:18.06:0,18,513
chr10	40212628	.	CTGTGTGTGTGAGTGTGTGTGTCTGTGTATCTGTGTGTG	C	4133.11	PASS	AB=0.920;AC=19;AF=0.339;AN=56;BaseQRankSum=2.870;DP=851;FS=18.893;HRun=0;HaplotypeScore=566.3283;InbreedingCoeff=0.6979;MQ=53.80;MQ0=12;MQRankSum=-1.760;QD=15.20;ReadPosRankSum=-3.664;VQSLOD=-0.7276;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:34,0:35:58.38:58,0,73	0/0:16,0:16:33.11:0,33,1928	0/0:53,0:24:39.26:0,39,1947	0/0:71,0:36:55.55:0,56,2158	0/0:19,0:19:30.10:0,30,2299	0/0:27,0:26:28.78:0,29,2040	0/0:45,0:41:70.15:0,70,4931	1/1:18,21:39:96.05:1542,96,0	0/0:41,0:41:76.54:0,77,4883	0/0:46,0:46:99:0,123,7948	0/0:16,0:16:20.17:0,20,1635	0/0:33,0:33:31.34:0,31,2344	0/1:14,0:16:20:370,0,20	0/1:16,0:18:9.43:41,0,9	0/0:39,0:39:78.59:0,79,5622	0/0:28,0:28:51.62:0,52,3400	0/0:33,0:33:62.67:0,63,4134	0/0:22,0:22:54.98:0,55,3739	1/1:19,0:16:26.80:330,27,0	1/1:6,25:31:3:25,3,0	1/1:45,0:45:20.19:221,20,0	0/0:30,0:31:62.22:0,62,4498	0/0:18,0:18:21.06:0,21,1587	0/0:40,0:40:51.10:0,51,3659	1/1:20,0:20:9.02:244,9,0	1/1:9,23:32:51.82:1120,52,0	1/1:15,0:15:15.84:116,16,0	1/1:2,0:2:3.01:66,3,0
chr10	40212658	.	C	CTGTG	6635.44	PASS	AB=0.757;AC=26;AF=0.520;AN=50;BaseQRankSum=-8.819;DP=755;FS=5.780;HRun=0;HaplotypeScore=203.6195;InbreedingCoeff=0.3873;MQ=50.32;MQ0=34;MQRankSum=2.490;QD=13.19;ReadPosRankSum=4.836;VQSLOD=4.0184;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:22:8.08:0,8,99	1/1:8,6:15:24.31:442,24,0	./.	./.	1/1:7,13:23:23.29:397,23,0	1/1:7,18:24:21.07:502,21,0	1/1:26,18:46:11.98:151,12,0	0/0:25,0:23:36:0,36,456	0/1:24,10:34:23.89:817,0,24	1/1:39,4:43:41.43:635,41,0	0/1:8,10:24:39.26:76,0,39	0/1:23,1:35:5.63:37,0,6	0/1:22,0:22:30.96:31,0,162	0/1:11,0:11:0:0,0,0	1/1:17,23:47:35.35:821,35,0	1/1:8,18:29:24.02:457,24,0	0/1:14,12:28:6.45:728,0,6	1/1:13,3:18:33:553,33,0	0/0:11,0:5:14.96:0,15,190	./.	0/0:26,0:21:2.51:0,3,45	0/1:16,11:32:44.89:804,0,45	0/1:8,0:23:0.08:0,0,0	1/1:41,0:43:6.91:185,7,0	0/0:9,0:9:6.02:0,6,91	0/0:27,0:24:30.10:0,30,450	0/0:6,0:7:17.94:0,18,264	0/0:1,0:1:3.01:0,3,42
chr10	40212660	.	G	GTCTCTC	977.16	PASS	AB=1.000;AC=18;AF=0.333;AN=54;BaseQRankSum=4.459;DP=750;FS=16.489;HRun=0;HaplotypeScore=236.5266;InbreedingCoeff=0.6798;MQ=48.71;MQ0=35;MQRankSum=-1.323;QD=5.78;ReadPosRankSum=-3.885;VQSLOD=0.3701;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:22:8.77:99,9,0	0/0:13,0:13:28.67:0,29,305	0/0:37,0:10:27.09:0,27,595	0/0:53,0:19:52.94:0,53,869	0/0:23,0:23:35.72:0,36,470	0/0:26,0:25:24.06:0,24,303	0/0:51,0:47:56.76:0,57,1159	1/1:25,0:23:9.12:67,9,0	0/0:31,0:31:36.17:0,36,691	0/0:42,0:40:99:0,118,2064	0/0:23,0:23:17.94:0,18,337	0/0:34,0:34:30.20:0,30,559	1/1:16,4:22:47.96:837,48,0	1/1:2,8:14:2.65:17,3,0	0/0:46,0:46:80.87:0,81,1072	0/0:29,0:29:43.75:0,44,552	0/0:28,0:28:56.95:0,57,639	0/0:18,0:18:47.05:0,47,601	1/1:12,0:5:3.45:23,3,0	./.	1/1:27,0:22:2.32:12,2,0	0/0:33,0:33:75.73:0,76,1015	0/0:25,0:25:14.92:0,15,305	0/0:42,0:42:30.65:0,31,801	1/1:9,0:10:10.77:46,11,0	0/1:28,0:24:13.56:29,0,14	0/1:7,0:7:14.15:14,0,57	1/1:1,0:1:2.50:9,2,0
chr10	40212802	.	G	GCT	6093.54	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-13.491;DP=725;FS=0.367;HRun=0;HaplotypeScore=106.6101;InbreedingCoeff=0.9928;MQ=80.40;MQ0=1;MQRankSum=-1.096;QD=40.35;ReadPosRankSum=-0.619;VQSLOD=6.1773;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,120,1608	0/0:7,0:7:18.06:0,18,244	0/0:21,0:21:42.12:0,42,554	0/0:18,0:18:36.08:0,36,462	0/0:20,0:20:57.19:0,57,768	1/1:1,21:22:51.17:894,51,0	1/1:4,27:31:63.21:1088,63,0	0/0:21,0:21:54.17:0,54,715	1/1:0,20:20:60.21:1051,60,0	0/0:35,0:35:99:0,105,1420	0/0:18,0:18:51.17:0,51,690	1/1:1,20:21:16.60:905,17,0	0/0:21,0:21:57.15:0,57,724	0/0:25,0:25:72.22:0,72,956	0/0:29,0:29:78.24:0,78,1034	0/0:23,0:23:69.21:0,69,913	0/0:44,0:44:99:0,123,1642	0/0:44,0:44:99:0,123,1636	0/0:22,0:22:48.15:0,48,637	0/0:20,0:20:54.17:0,54,715	0/0:59,0:58:99:0,144,1914	0/0:24,0:24:63.07:0,63,850	1/1:1,13:14:36.12:610,36,0	1/1:7,35:43:90.27:1545,90,0	0/0:19,0:19:57.19:0,57,770	0/0:33,0:33:96.32:0,96,1298	0/0:20,0:20:60.20:0,60,810	0/0:7,0:7:15.05:0,15,203
chr10	40213251	.	A	AT	4104.67	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-13.003;DP=582;FS=3.237;HRun=9;HaplotypeScore=67.1543;InbreedingCoeff=0.9786;MQ=79.22;MQ0=0;MQRankSum=-1.289;QD=25.98;ReadPosRankSum=-0.586;VQSLOD=4.0661;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:89.93:0,90,778	0/0:5,0:5:15:0,15,130	0/0:26,0:25:20.50:0,20,441	0/0:14,0:14:26.48:0,26,215	0/0:30,0:30:80.94:0,81,699	0/0:16,0:16:38.99:0,39,339	0/0:19,0:19:50.99:0,51,443	1/1:4,24:28:49.11:751,49,0	0/0:19,0:20:47:0,47,393	0/0:17,0:17:50.99:0,51,443	0/0:20,0:20:47.98:0,48,417	0/0:27,0:27:77.98:0,78,677	0/0:31,0:31:86.95:0,87,752	0/0:18,0:18:44.98:0,45,391	0/0:19,0:19:56.95:0,57,486	0/0:22,0:22:56.96:0,57,491	0/0:25,0:25:74.96:0,75,646	0/0:14,0:14:35.99:0,36,313	1/1:2,11:13:33.09:365,33,0	1/1:1,19:21:53.98:578,54,0	1/1:3,15:18:36.10:398,36,0	0/0:15,0:15:41.98:0,42,365	0/0:23,0:23:59.97:0,60,521	0/0:27,0:27:71.96:0,72,621	1/1:3,16:20:50.97:545,51,0	1/1:6,25:31:52.15:804,52,0	1/1:2,20:22:54.15:597,54,0	1/1:1,4:5:6.02:66,6,0
chr10	40214433	.	CCCT	C	82.70	PASS	AB=1.000;AC=9;AF=0.237;AN=38;BaseQRankSum=-0.720;DP=104;FS=2.508;HRun=0;HaplotypeScore=26.1605;InbreedingCoeff=0.2715;MQ=43.06;MQ0=26;MQRankSum=0.960;QD=3.06;ReadPosRankSum=-0.600;VQSLOD=1.1824;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:8:3.48:0,3,38	./.	0/0:5,0:1:3.01:0,3,35	./.	./.	./.	0/0:7,0:5:2.70:0,3,35	0/0:3,0:3:9.03:0,9,188	0/0:6,0:4:3.39:0,3,8	./.	1/1:0,2:2:2.80:34,3,0	0/0:4,0:3:0:0,0,1	0/0:5,0:4:9.03:0,9,116	0/0:2,0:2:2.99:0,3,23	1/1:4,2:2:3.01:41,3,0	1/1:1,0:1:3.01:42,3,0	./.	1/1:3,0:1:3.01:41,3,0	0/0:3,0:2:3.01:0,3,68	0/0:3,0:1:3.01:0,3,36	0/1:15,0:10:29.94:30,0,220	./.	0/0:2,0:2:0:0,0,0	0/0:5,0:4:0:0,0,0	0/0:5,0:4:3.01:0,3,58	0/0:3,0:2:6.02:0,6,104	./.	./.
chr10	40214879	.	TA	T	4581.31	PASS	AB=0.971;AC=52;AF=0.929;AN=56;BaseQRankSum=-1.982;DP=373;FS=6.659;HRun=12;HaplotypeScore=62.9982;InbreedingCoeff=0.3601;MQ=65.21;MQ0=0;MQRankSum=-1.310;QD=12.45;ReadPosRankSum=3.684;VQSLOD=4.7261;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,18:20:47.81:371,48,0	1/1:0,3:3:5.98:46,6,0	0/1:15,1:11:13.89:14,0,151	0/0:5,0:5:6:0,6,56	1/1:3,9:13:25.93:192,26,0	1/1:10,0:10:13.64:38,14,0	0/1:10,0:10:4.86:8,0,5	1/1:3,0:20:30.03:86,30,0	1/1:5,0:5:7.62:32,8,0	1/1:1,10:11:26.88:209,27,0	1/1:2,12:14:32.84:255,33,0	1/1:1,15:17:46.87:354,47,0	1/1:0,11:12:34.91:261,35,0	1/1:3,5:8:14.92:116,15,0	1/1:1,17:18:44.80:348,45,0	1/1:1,8:9:23.91:186,24,0	1/1:4,23:28:67.76:517,68,0	1/1:7,23:30:64.78:493,65,0	1/1:2,0:17:26.92:77,27,0	1/1:1,0:9:14.25:41,14,0	1/1:1,0:9:5.85:17,6,0	1/1:0,3:3:8.97:70,9,0	1/1:4,5:9:11.94:93,12,0	1/1:3,24:27:65.73:511,66,0	1/1:0,0:8:14.26:41,14,0	1/1:2,0:22:40.46:117,40,0	1/1:1,0:16:28.52:82,29,0	1/1:1,0:2:2.03:6,2,0
chr10	40214886	.	A	AT	578.09	PASS	AB=1.000;AC=16;AF=0.286;AN=56;BaseQRankSum=10.853;DP=383;FS=8.191;HRun=0;HaplotypeScore=79.7296;InbreedingCoeff=0.5614;MQ=67.07;MQ0=0;MQRankSum=1.465;QD=4.52;ReadPosRankSum=2.124;VQSLOD=2.5842;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:53.60:0,54,382	0/0:3,0:3:5.95:0,6,42	0/0:18,0:13:34.21:0,34,364	0/0:6,0:5:11.82:0,12,103	0/0:13,0:13:38.59:0,39,271	1/1:1,9:10:21.69:162,22,0	1/1:4,7:11:19.21:105,19,0	0/1:20,0:20:19.61:95,0,20	1/1:2,3:5:13.07:79,13,0	0/0:13,0:13:38.76:0,39,290	0/0:15,0:15:44.67:0,45,321	0/0:20,0:20:56.59:0,57,412	0/0:12,0:12:35.54:0,36,241	0/0:6,0:6:17.88:0,18,131	0/0:19,0:19:53.60:0,54,385	0/0:11,0:11:29.81:0,30,222	0/0:29,0:29:83.41:0,83,607	0/0:28,0:28:77.42:0,77,558	0/1:18,0:17:37.84:59,0,38	0/1:9,0:9:10.84:11,0,27	1/1:8,0:8:5.20:16,5,0	0/0:4,0:4:11.89:0,12,82	0/0:8,0:8:17.87:0,18,130	0/0:26,0:26:71.47:0,71,511	0/1:10,0:10:14.87:15,0,23	1/1:22,0:22:41.62:190,42,0	1/1:15,0:15:4.54:28,5,0	0/0:4,0:4:5.96:0,6,44
chr10	40214888	.	A	AAT	588.67	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=6.482;DP=395;FS=4.741;HRun=0;HaplotypeScore=89.0890;InbreedingCoeff=0.8872;MQ=66.83;MQ0=0;MQRankSum=-4.487;QD=22.64;ReadPosRankSum=-1.380;VQSLOD=3.3409;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:50.80:0,51,393	0/0:3,0:3:5.98:0,6,46	0/0:18,0:13:30.51:0,31,319	0/0:6,0:5:14.53:0,15,121	0/0:13,0:13:35.80:0,36,268	1/1:1,9:10:29.44:298,29,0	1/1:4,7:11:13.24:285,13,0	0/0:21,0:21:13.27:0,13,236	1/1:2,3:5:14.97:142,15,0	0/0:15,0:15:35.41:0,35,276	0/0:15,0:15:44.83:0,45,350	0/0:20,0:20:56.80:0,57,447	0/0:14,0:14:41.84:0,42,326	0/0:6,0:6:17.94:0,18,140	0/0:20,0:20:56.78:0,57,444	0/0:11,0:11:32.91:0,33,265	0/0:31,0:31:83.67:0,84,648	0/0:30,0:30:77.67:0,78,601	0/0:18,0:17:23.02:0,23,214	0/0:9,0:9:26.49:0,26,165	0/0:8,0:8:8.61:0,9,55	0/0:4,0:4:11.92:0,12,88	0/0:7,0:7:17.92:0,18,138	0/0:27,0:27:74.69:0,75,575	0/0:12,0:12:31.96:0,32,187	0/0:21,0:21:51.40:0,51,335	0/0:15,0:15:41.33:0,41,264	0/0:4,0:4:11.48:0,11,63
chr10	40214892	.	T	TA	851.57	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=6.198;DP=404;FS=0.000;HRun=12;HaplotypeScore=80.7591;InbreedingCoeff=0.9052;MQ=69.95;MQ0=0;MQRankSum=-6.177;QD=31.54;ReadPosRankSum=-0.131;VQSLOD=2.4656;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:57.14:0,57,639	0/0:2,0:2:6.02:0,6,72	0/0:21,0:16:26.13:0,26,384	0/0:6,0:5:15:0,15,164	0/0:14,0:14:42.11:0,42,476	1/1:0,10:10:30.10:405,30,0	1/1:4,7:11:32.84:399,33,0	0/0:23,0:23:60.40:0,60,575	1/1:3,3:6:15.03:187,15,0	0/0:15,0:15:39.11:0,39,463	0/0:15,0:15:42.10:0,42,488	0/0:21,0:21:60.14:0,60,677	0/0:14,0:14:41.98:0,42,469	0/0:5,0:5:15:0,15,163	0/0:19,0:19:53.98:0,54,604	0/0:14,0:14:42.10:0,42,493	0/0:31,0:31:87.25:0,87,1016	0/0:30,0:30:81.23:0,81,940	0/0:19,0:18:46.71:0,47,443	0/0:10,0:10:27.08:0,27,302	0/0:8,0:8:9.03:0,9,104	0/0:4,0:4:12.03:0,12,138	0/0:7,0:7:18.04:0,18,204	0/0:25,0:25:72.20:0,72,831	0/0:12,0:12:33.09:0,33,369	0/0:22,0:22:61.40:0,61,656	0/0:15,0:15:41.14:0,41,441	0/0:4,0:4:12.03:0,12,131
chr10	40217244	.	G	GT	1593	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-6.924;DP=598;FS=1.929;HRun=6;HaplotypeScore=76.0540;InbreedingCoeff=0.9970;MQ=69.18;MQ0=0;MQRankSum=-0.970;QD=27.47;ReadPosRankSum=1.521;VQSLOD=4.3500;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,141,1415	0/0:9,0:9:27.06:0,27,275	0/0:16,0:16:33.05:0,33,330	0/0:21,0:21:56.87:0,57,539	0/0:27,0:27:66.15:0,66,672	0/0:13,0:13:24.05:0,24,243	0/0:27,0:27:75.17:0,75,765	0/0:20,0:20:45.06:0,45,448	0/0:24,0:24:66.15:0,66,671	0/0:35,0:35:90.20:0,90,913	0/0:17,0:17:39.09:0,39,398	1/1:3,15:18:39.02:490,39,0	0/0:19,0:19:48.10:0,48,489	0/0:16,0:16:42.09:0,42,428	0/0:19,0:19:48.10:0,48,489	0/0:15,0:15:36.08:0,36,367	0/0:32,0:32:84.19:0,84,857	0/0:16,0:16:48.11:0,48,490	0/0:22,0:22:54.09:0,54,539	0/0:13,0:13:30.06:0,30,306	0/0:41,0:41:99:0,105,1071	0/0:12,0:12:27.04:0,27,269	1/1:0,8:8:24.08:302,24,0	1/1:2,30:32:75.24:943,75,0	0/0:19,0:19:51.11:0,51,519	0/0:28,0:28:72.14:0,72,728	0/0:19,0:19:51.11:0,51,519	0/0:9,0:9:27.06:0,27,275
chr10	40217361	.	G	GGGCTGGAGAGAT	31925.83	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-6.088;DP=368;FS=2.935;HRun=0;HaplotypeScore=104.5718;InbreedingCoeff=0.7597;MQ=63.46;MQ0=2;MQRankSum=-8.298;QD=97.33;ReadPosRankSum=4.934;VQSLOD=4.9261;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,6:19:24.04:1298,24,0	1/1:3,7:9:27.05:1380,27,0	0/0:16,0:15:42.03:0,42,1151	0/0:24,0:20:51.17:0,51,1706	1/1:15,10:26:33.11:1863,33,0	1/1:6,7:15:30.10:1815,30,0	1/1:11,3:13:24.08:1456,24,0	1/1:12,0:12:27.04:895,27,0	1/1:10,3:13:30.10:1556,30,0	1/1:9,6:15:39.06:1891,39,0	1/1:7,4:11:15.05:913,15,0	1/1:4,8:12:30.10:1762,30,0	1/1:4,5:9:21.07:1214,21,0	1/1:7,3:11:15.05:685,15,0	1/1:4,2:8:6.02:365,6,0	1/1:3,1:5:9.03:473,9,0	1/1:5,5:12:21.07:1278,21,0	1/1:1,4:5:15.05:813,15,0	1/1:10,6:16:36.11:1777,36,0	1/1:6,6:12:21.07:1278,21,0	1/1:4,2:8:3.01:183,3,0	1/1:9,6:16:12.04:727,12,0	1/1:5,4:10:12.04:731,12,0	1/1:6,3:10:9.03:548,9,0	1/1:6,8:14:27.09:1644,27,0	1/1:9,12:22:63.22:3327,63,0	1/1:9,5:13:30.10:1506,30,0	1/1:3,0:3:9.03:549,9,0
chr10	40217910	.	GAC	G	669.45	PASS	AB=0.953;AC=23;AF=0.479;AN=48;BaseQRankSum=3.667;DP=557;FS=1.711;HRun=0;HaplotypeScore=122.3558;InbreedingCoeff=0.4147;MQ=68.51;MQ0=7;MQRankSum=-0.762;QD=2.25;ReadPosRankSum=1.535;VQSLOD=2.5927;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:4.79:0,5,50	0/0:8,0:8:5.97:0,6,59	./.	./.	1/1:18,2:21:6:58,6,0	0/1:16,0:16:21.88:22,0,95	0/1:17,2:19:17.71:18,0,140	./.	0/1:21,3:25:38.45:38,0,239	0/0:25,0:25:29.78:0,30,261	0/0:10,0:10:2.99:0,3,24	0/0:18,0:18:13.26:0,13,154	0/0:20,0:22:16.18:0,16,151	0/0:17,0:18:12.01:0,12,138	1/1:13,7:19:30.24:265,30,0	1/1:11,6:17:14.99:150,15,0	1/1:18,5:23:11.36:74,11,0	0/0:20,0:20:23.88:0,24,230	1/1:14,1:15:8.70:49,9,0	1/1:15,0:15:2.99:24,3,0	0/1:35,0:35:0.40:0,0,1	./.	0/0:11,0:11:5.85:0,6,58	0/1:22,0:22:11.36:11,0,53	1/1:18,0:18:3.78:17,4,0	1/1:30,0:29:8.74:57,9,0	1/1:19,0:19:8.21:47,8,0	0/0:4,0:4:0:0,0,0
chr10	40217948	.	CACACAA	C	985.84	PASS	AB=0.988;AC=10;AF=0.179;AN=56;BaseQRankSum=4.133;DP=606;FS=1.082;HRun=0;HaplotypeScore=235.9454;InbreedingCoeff=0.3820;MQ=46.44;MQ0=9;MQRankSum=-5.733;QD=7.04;ReadPosRankSum=2.049;VQSLOD=2.5791;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:17.98:0,18,217	0/0:8,0:7:14.81:0,15,181	0/0:31,0:18:54.05:0,54,547	0/0:34,0:18:53.98:0,54,658	0/0:31,0:30:17.07:0,17,67	0/0:11,0:11:25.32:0,25,565	0/0:28,0:28:75.58:0,76,1231	0/1:25,0:24:60.68:246,0,61	0/0:22,0:22:52.91:0,53,995	0/0:26,0:26:69.68:0,70,972	0/0:14,0:14:7.25:0,7,75	0/0:28,0:28:40.16:0,40,532	0/0:23,0:23:48.61:0,49,611	0/0:20,0:20:29.51:0,30,446	0/0:25,0:25:12.20:0,12,326	0/0:15,0:15:19.53:0,20,197	0/0:32,0:29:35.51:0,36,235	0/0:18,0:18:45.01:0,45,780	1/1:26,1:25:20.68:367,21,0	0/1:16,0:16:23.40:23,0,48	1/1:29,1:29:11.62:79,12,0	0/0:20,0:19:11.27:0,11,75	0/0:13,0:12:13.23:0,13,154	0/0:20,0:20:17.24:0,17,234	0/0:17,1:17:1.81:0,2,52	0/1:20,0:19:99:140,0,138	0/1:19,1:20:53.03:264,0,53	1/1:2,0:2:2.92:17,3,0
chr10	40217950	.	CACAA	C	1579.10	PASS	AB=1.000;AC=20;AF=0.357;AN=56;BaseQRankSum=1.779;DP=594;FS=3.739;HRun=0;HaplotypeScore=220.9217;InbreedingCoeff=0.6008;MQ=47.32;MQ0=8;MQRankSum=-4.348;QD=6.22;ReadPosRankSum=2.516;VQSLOD=2.5434;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:15.72:0,16,112	0/0:8,0:8:17.75:0,18,141	0/0:32,0:19:48.46:0,48,501	0/0:33,0:18:53.91:0,54,559	0/1:29,0:28:1.24:49,0,1	0/0:9,0:9:6.85:0,7,351	0/0:27,0:27:69.53:0,70,912	1/1:24,0:23:33.77:354,34,0	0/0:21,0:21:52.36:0,52,741	0/0:27,0:27:69.08:0,69,740	0/0:15,0:15:7.72:0,8,50	0/0:28,0:28:35.53:0,36,384	0/0:23,0:23:42.55:0,43,386	0/0:21,0:21:27.46:0,27,283	0/1:26,0:26:16.49:16,0,84	0/0:16,0:16:4.11:0,4,78	0/1:31,0:28:36.92:37,0,157	0/0:18,0:18:41.99:0,42,538	1/1:24,1:23:58.75:506,59,0	1/1:12,3:15:4.24:27,4,0	1/1:27,1:27:8.34:56,8,0	0/0:20,0:19:4.88:0,5,12	0/0:13,0:12:13.23:0,13,125	0/1:19,0:19:7.89:8,0,102	1/1:14,3:16:8.99:130,9,0	1/1:17,2:18:34.48:304,34,0	1/1:19,0:19:35.57:266,36,0	1/1:2,0:2:2.92:17,3,0
chr10	40217959	.	TAGCATGC	T	20747.83	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=11.732;DP=516;FS=3.302;HRun=0;HaplotypeScore=159.0401;InbreedingCoeff=0.9463;MQ=63.45;MQ0=3;MQRankSum=-11.406;QD=52.93;ReadPosRankSum=-3.874;VQSLOD=4.2772;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:2,18:20:42.14:962,42,0	1/1:0,5:5:9.03:242,9,0	0/0:37,0:24:72.24:0,72,2537	0/0:40,0:26:75.25:0,75,2628	1/1:1,26:26:60.21:1418,60,0	0/0:7,0:7:21.07:0,21,831	0/0:22,0:22:66.23:0,66,2566	1/1:5,16:21:48.16:1231,48,0	0/0:18,0:18:50.84:0,51,2058	1/1:4,14:18:42.14:1132,42,0	1/1:2,12:14:33.11:803,33,0	1/1:0,24:24:63.22:1596,63,0	1/1:2,19:21:51.17:1284,51,0	1/1:1,14:15:42.14:1056,42,0	1/1:2,20:22:54.19:1337,54,0	1/1:1,14:15:42.14:1049,42,0	1/1:6,23:27:48.13:1219,48,0	1/1:3,9:12:24.08:644,24,0	1/1:4,18:22:54.19:1397,54,0	1/1:0,14:14:24.05:376,24,0	1/1:3,21:23:30.04:550,30,0	1/1:1,15:16:42.14:1004,42,0	1/1:2,13:14:30.10:745,30,0	1/1:3,8:11:8.42:194,8,0	1/1:1,15:15:30.09:505,30,0	1/1:0,12:12:36.12:933,36,0	1/1:0,15:15:39.13:954,39,0	1/1:0,4:4:6.02:119,6,0
chr10	40218964	.	CA	C	445.40	PASS	AB=0.829;AC=18;AF=0.375;AN=48;BaseQRankSum=3.751;DP=189;FS=3.197;HRun=1;HaplotypeScore=51.1839;InbreedingCoeff=0.1543;MQ=38.64;MQ0=16;MQRankSum=-1.992;QD=5.50;ReadPosRankSum=-0.541;VQSLOD=0.3932;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:15:7.82:0,8,166	./.	0/0:5,0:4:12.04:0,12,153	0/0:6,0:4:12.04:0,12,152	./.	0/0:12,0:11:16.11:0,16,177	0/0:10,0:8:5.95:0,6,86	0/1:9,0:6:10.18:10,0,122	0/0:14,0:14:20.51:0,21,266	0/1:4,0:4:2.03:2,0,67	./.	0/0:7,0:7:8.59:0,9,110	0/0:7,0:7:11.02:0,11,101	0/1:3,1:4:0.24:10,0,0	1/1:2,1:2:2.97:20,3,0	1/1:1,0:1:0.47:1,0,0	0/1:7,2:8:87.75:147,0,88	0/1:7,1:7:5.52:6,0,106	0/1:3,1:3:25.73:26,0,66	./.	1/1:10,6:11:5.85:70,6,0	1/1:4,0:4:7.82:68,8,0	0/0:8,0:8:8.81:0,9,114	0/0:17,0:17:16.51:0,17,217	0/1:5,3:6:23.15:94,0,23	1/1:1,0:3:3.48:41,3,0	0/1:4,2:5:60.33:94,0,60	0/0:1,0:1:3.01:0,3,38
chr10	40218970	.	CA	C	329.57	PASS	AB=0.965;AC=22;AF=0.458;AN=48;BaseQRankSum=5.913;DP=170;FS=6.857;HRun=1;HaplotypeScore=47.2825;InbreedingCoeff=0.2162;MQ=35.57;MQ0=18;MQRankSum=-4.076;QD=3.88;ReadPosRankSum=0.753;VQSLOD=0.1406;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:11,3:13:60.63:61,0,112	./.	0/0:6,0:3:9.03:0,9,113	0/0:6,0:3:9.03:0,9,114	./.	0/0:10,0:10:10.11:0,10,114	0/0:10,0:8:8.94:0,9,109	0/1:10,0:5:6.09:6,0,97	0/0:13,0:13:17.51:0,18,241	1/1:3,0:4:4.88:63,5,0	./.	0/0:8,0:7:8.49:0,8,111	0/0:3,0:3:6.02:0,6,75	1/1:2,2:4:9.87:87,10,0	1/1:3,0:2:2.94:18,3,0	1/1:2,0:2:1.36:3,1,0	0/1:7,0:6:38.08:53,0,38	0/1:6,0:5:50.11:50,0,96	0/1:4,0:3:5.77:6,0,60	./.	1/1:13,1:9:2.84:29,3,0	1/1:1,0:1:1.82:5,2,0	0/0:7,0:6:5.79:0,6,63	0/0:17,0:17:13.50:0,13,179	1/1:6,0:5:8.72:57,9,0	1/1:3,0:3:0.47:1,0,0	0/1:5,0:4:28.35:37,0,28	0/0:1,0:1:3.01:0,3,38
chr10	40218972	.	CA	C	219.99	PASS	AB=0.865;AC=21;AF=0.438;AN=48;BaseQRankSum=6.043;DP=167;FS=2.098;HRun=1;HaplotypeScore=46.9410;InbreedingCoeff=0.1225;MQ=34.25;MQ0=18;MQRankSum=-3.965;QD=2.62;ReadPosRankSum=0.622;VQSLOD=-0.6401;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:14,1:13:80.70:81,0,107	./.	0/0:6,0:1:3.01:0,3,38	0/0:6,0:2:6.02:0,6,76	./.	0/0:9,1:10:10.11:0,10,114	0/0:9,0:7:5.95:0,6,86	0/1:10,0:5:7.30:7,0,86	0/0:13,0:13:17.51:0,18,240	1/1:2,1:3:2.78:29,3,0	./.	0/0:7,1:7:7.52:0,8,109	0/0:3,0:3:6.02:0,6,75	1/1:3,0:3:6.68:38,7,0	1/1:2,1:2:2.80:13,3,0	1/1:3,0:3:4.35:26,4,0	0/1:4,1:5:24.36:43,0,24	0/1:5,2:6:30.08:30,0,61	0/1:4,0:3:5.83:6,0,35	./.	1/1:7,7:9:2.20:9,2,0	1/1:1,0:1:1.82:5,2,0	0/0:6,0:5:2.79:0,3,37	0/0:15,2:17:13.48:0,13,166	0/1:6,1:5:0.47:25,0,0	1/1:3,0:3:0.47:1,0,0	0/1:3,2:4:25.94:45,0,26	0/0:1,0:1:3.01:0,3,38
chr10	40218974	.	CACA	C	990.98	PASS	AB=0.905;AC=28;AF=0.560;AN=50;BaseQRankSum=3.024;DP=174;FS=3.302;HRun=0;HaplotypeScore=48.9576;InbreedingCoeff=0.2536;MQ=34.87;MQ0=17;MQRankSum=-4.579;QD=8.77;ReadPosRankSum=-0.201;VQSLOD=2.4695;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:13,2:13:73.85:157,0,74	./.	0/0:7,0:1:3.01:0,3,32	0/0:7,0:2:6.02:0,6,75	0/1:2,1:3:0:0,0,0	0/1:10,0:10:26.42:26,0,145	0/0:8,0:6:0.07:0,0,66	1/1:11,0:6:7.67:45,8,0	0/0:13,0:13:13.23:0,13,291	0/1:3,0:3:3.83:55,0,4	./.	0/1:9,0:8:35.56:36,0,91	0/0:3,0:3:6.02:0,6,68	0/1:3,1:4:24.36:71,0,24	1/1:3,0:2:3:26,3,0	1/1:3,0:3:2.78:39,3,0	1/1:7,0:6:16.56:188,17,0	1/1:8,0:7:15.15:161,15,0	1/1:4,0:3:6.12:57,6,0	./.	1/1:13,0:9:3.44:22,3,0	1/1:1,0:1:2.97:20,3,0	1/1:5,0:4:0.47:1,0,0	0/0:17,0:17:15.21:0,15,231	1/1:8,0:6:10.61:110,11,0	0/0:4,0:4:0.47:0,0,1	1/1:6,0:5:12.05:126,12,0	0/0:1,0:1:3.01:0,3,48
chr10	40218976	.	CA	C	827.11	PASS	AB=0.945;AC=32;AF=0.727;AN=44;BaseQRankSum=3.423;DP=173;FS=0.960;HRun=1;HaplotypeScore=50.3454;InbreedingCoeff=0.0665;MQ=35.00;MQ0=19;MQRankSum=-4.636;QD=6.13;ReadPosRankSum=-0.785;VQSLOD=0.0837;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:12,2:13:72.34:101,0,72	./.	./.	./.	./.	0/1:9,1:10:27.59:28,0,70	0/1:9,0:7:20.95:21,0,40	1/1:11,0:6:7.63:32,8,0	0/1:13,0:13:10.06:10,0,177	1/1:1,2:3:8.61:73,9,0	./.	0/1:7,1:7:35.45:35,0,40	0/0:3,0:3:6.02:0,6,68	0/1:4,0:4:24.49:40,0,24	1/1:2,1:2:2.22:7,2,0	1/1:3,0:3:4.37:42,4,0	1/1:5,3:7:16.54:157,17,0	1/1:5,3:7:15.14:146,15,0	1/1:4,0:3:6.12:43,6,0	./.	1/1:7,7:9:2.69:9,3,0	1/1:0,1:1:2.98:21,3,0	1/1:4,0:3:0.47:1,0,0	0/0:15,2:17:3.07:0,3,105	1/1:7,1:6:11.36:96,11,0	1/1:4,0:4:0.94:2,1,0	1/1:4,2:5:12.05:94,12,0	0/0:1,0:1:3.01:0,3,37
chr10	40218977	.	A	AC	754.72	PASS	AB=0.989;AC=30;AF=0.682;AN=44;BaseQRankSum=4.331;DP=184;FS=1.052;HRun=1;HaplotypeScore=56.6150;InbreedingCoeff=0.1109;MQ=34.32;MQ0=19;MQRankSum=-4.073;QD=5.20;ReadPosRankSum=-0.218;VQSLOD=0.2492;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:14,0:13:73.67:74,0,88	./.	./.	./.	0/0:3,0:3:0:0,0,0	0/1:9,1:10:8.23:62,0,8	0/1:10,0:8:2.91:3,0,33	1/1:11,0:6:2.16:7,2,0	0/1:13,0:13:13.12:13,0,51	1/1:3,0:3:8.81:77,9,0	./.	0/1:10,0:9:1.06:40,0,1	0/0:3,0:3:6.02:0,6,72	0/1:4,0:4:27.37:37,0,27	1/1:4,0:3:3.01:33,3,0	1/1:5,0:5:8.99:99,9,0	1/1:7,2:8:13.75:120,14,0	1/1:9,1:9:14.84:145,15,0	1/1:4,0:3:2.98:21,3,0	./.	1/1:15,0:10:0.47:1,0,0	1/1:1,0:1:3.01:37,3,0	0/1:4,0:3:0:0,0,0	0/0:16,0:16:2.17:0,2,22	1/1:8,0:6:8.61:51,9,0	0/1:4,0:4:0:0,0,0	1/1:6,0:5:8.80:54,9,0	./.
chr10	40219595	.	AGAGAGAGAGACGAGAGAGAGAGAGAGAGAGC	A	1268.77	PASS	AB=1.000;AC=14;AF=0.250;AN=56;BaseQRankSum=-3.757;DP=633;FS=13.343;HRun=0;HaplotypeScore=275.0311;InbreedingCoeff=0.2622;MQ=50.77;MQ0=52;MQRankSum=-0.230;QD=4.52;ReadPosRankSum=-3.133;VQSLOD=0.8684;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:19:18.06:0,18,1199	0/0:6,0:6:12.04:0,12,624	0/0:116,0:17:26.61:0,27,538	0/1:139,0:25:43.35:43,0,680	0/0:17,0:15:13.91:0,14,824	1/1:4,15:18:3.48:242,3,0	0/0:8,0:8:3.01:0,3,50	0/1:27,0:25:99:149,0,999	1/1:0,17:17:6.02:427,6,0	0/1:14,0:14:8.32:8,0,1672	0/0:13,0:13:11.76:0,12,580	1/1:1,14:15:3.01:241,3,0	0/0:10,0:10:18.06:0,18,1326	0/0:13,0:13:24.07:0,24,1358	0/0:13,0:11:4.22:0,4,625	0/0:11,0:10:13.10:0,13,618	0/0:16,0:13:21.07:0,21,1110	0/1:13,0:13:45.28:45,0,1706	0/1:8,0:7:18.45:18,0,654	0/0:22,0:20:24.47:0,24,830	0/0:13,0:9:6.02:0,6,315	0/0:17,0:16:17.81:0,18,1154	0/1:11,0:11:0.01:0,0,0	1/1:4,14:18:3.01:241,3,0	0/0:13,0:12:4.57:0,5,339	0/0:24,0:22:51.10:0,51,2159	0/0:9,0:6:15.05:0,15,716	0/0:9,0:9:15.05:0,15,807
chr10	40219605	.	AC	A	5473.07	PASS	AB=0.726;AC=46;AF=0.821;AN=56;BaseQRankSum=-2.762;DP=642;FS=5.144;HRun=1;HaplotypeScore=110.4086;InbreedingCoeff=0.6304;MQ=51.53;MQ0=53;MQRankSum=0.089;QD=11.72;ReadPosRankSum=3.676;VQSLOD=3.5935;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:18:18.05:0,18,223	1/1:0,6:6:12.04:161,12,0	0/0:134,1:19:35.55:0,36,476	0/1:148,8:29:32.47:32,0,508	1/1:1,16:15:18.04:231,18,0	1/1:15,1:16:2.50:9,2,0	1/1:0,7:7:3:29,3,0	1/1:1,23:22:66.20:881,66,0	1/1:17,0:17:5.51:47,6,0	1/1:1,12:13:39.11:502,39,0	1/1:0,14:14:15.03:207,15,0	1/1:14,0:14:2.50:9,2,0	0/0:10,0:10:10.15:0,10,178	0/0:10,0:10:21.96:0,22,241	1/1:0,12:10:11.98:150,12,0	1/1:0,9:8:15.02:196,15,0	1/1:1,11:9:21.07:286,21,0	1/1:0,15:15:39.13:527,39,0	1/1:0,9:8:18.06:242,18,0	1/1:1,18:17:27.96:358,28,0	1/1:0,11:7:6.01:80,6,0	1/1:0,17:16:20.66:271,21,0	0/1:0,10:10:0.01:0,0,0	1/1:14,0:14:2.50:9,2,0	1/1:0,15:15:9:110,9,0	1/1:0,22:20:57.19:763,57,0	1/1:0,9:6:15.04:186,15,0	1/1:1,8:9:15.04:187,15,0
chr10	40219616	.	AGAGAGAGAGC	A	1550.24	PASS	AB=0.979;AC=28;AF=0.500;AN=56;BaseQRankSum=0.436;DP=645;FS=14.169;HRun=0;HaplotypeScore=173.6587;InbreedingCoeff=-0.1057;MQ=57.18;MQ0=47;MQRankSum=-0.768;QD=5.24;ReadPosRankSum=2.320;VQSLOD=2.1435;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:19:15.05:0,15,383	0/1:7,0:7:5.80:6,0,9	0/0:136,0:26:17.92:0,18,493	0/0:157,0:35:22.37:0,22,632	0/1:18,0:16:16.46:16,0,39	0/1:16,0:16:9.94:66,0,10	0/0:3,0:3:8.82:0,9,60	1/1:24,0:23:6.60:117,7,0	1/1:17,0:17:5.91:88,6,0	0/1:13,0:13:54.06:54,0,99	0/1:16,0:16:13.29:13,0,32	1/1:14,0:14:3.01:71,3,0	0/0:11,0:11:16.59:0,17,269	0/0:9,0:9:18.05:0,18,345	0/1:12,0:10:21.88:22,0,47	0/0:10,0:9:7.34:0,7,61	0/1:15,0:12:11.45:11,0,61	0/1:14,0:14:47.27:47,0,183	0/1:6,0:5:12.35:96,0,12	1/1:14,2:14:14.87:210,15,0	1/1:9,0:5:5.71:46,6,0	1/1:18,0:17:1.85:70,2,0	0/1:7,0:7:15.97:16,0,37	1/1:14,0:14:3.01:71,3,0	0/1:16,1:17:42.44:79,0,42	0/1:22,0:20:16.31:291,0,16	0/1:9,1:9:39.34:151,0,39	0/1:9,2:11:52.34:178,0,52
chr10	40219620	.	AGAGAGC	A	2607.18	PASS	AB=0.992;AC=40;AF=0.714;AN=56;BaseQRankSum=-1.567;DP=632;FS=1.901;HRun=0;HaplotypeScore=155.6678;InbreedingCoeff=-0.1059;MQ=61.62;MQ0=45;MQRankSum=-1.104;QD=5.35;ReadPosRankSum=-0.072;VQSLOD=2.0602;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:19:15.01:0,15,133	1/1:8,0:8:17.72:136,18,0	0/0:124,0:25:26.13:0,26,337	0/1:153,0:39:12.40:12,0,439	1/1:17,0:15:10.54:69,11,0	1/1:16,0:16:3.48:44,3,0	0/1:4,0:4:31.94:32,0,36	1/1:22,0:21:12.38:153,12,0	1/1:17,0:17:5.89:59,6,0	1/1:12,0:12:8.94:211,9,0	0/1:16,0:16:3.47:72,0,3	1/1:14,0:14:3.01:43,3,0	0/1:9,1:10:63.46:68,0,63	0/1:10,0:10:15.54:16,0,87	1/1:9,2:10:3.82:73,4,0	0/1:9,0:8:14.43:51,0,14	1/1:15,0:12:18.87:167,19,0	0/1:15,0:15:31.58:176,0,32	0/1:7,0:6:23.31:71,0,23	1/1:17,0:15:18.91:194,19,0	1/1:10,0:7:5.86:46,6,0	1/1:19,1:19:26.97:229,27,0	0/1:8,0:8:25.63:38,0,26	1/1:14,0:14:3.01:43,3,0	0/1:17,0:17:3.47:93,0,3	1/1:22,0:20:30.12:364,30,0	0/1:11,0:10:17.14:150,0,17	0/1:12,0:12:21.31:161,0,21
chr10	40219622	.	AGAGC	A	3508.12	PASS	AB=0.976;AC=45;AF=0.804;AN=56;BaseQRankSum=-1.338;DP=620;FS=5.074;HRun=0;HaplotypeScore=144.5975;InbreedingCoeff=0.0663;MQ=63.37;MQ0=40;MQRankSum=-1.070;QD=7.29;ReadPosRankSum=1.311;VQSLOD=2.7186;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:20:0:0,0,2	1/1:7,1:8:17.74:149,18,0	0/0:117,0:26:14.56:0,15,327	0/1:148,0:38:50.27:50,0,357	1/1:15,2:16:17.57:149,18,0	1/1:16,0:16:6:54,6,0	0/1:4,0:4:31.51:32,0,32	1/1:22,0:21:27.90:225,28,0	1/1:17,0:17:5.88:44,6,0	1/1:12,1:13:20.84:277,21,0	0/1:14,1:15:0.83:63,0,1	1/1:14,0:14:3.01:30,3,0	1/1:8,2:10:8.18:146,8,0	1/1:7,3:10:11.41:123,11,0	1/1:9,2:10:8.93:91,9,0	0/1:8,1:8:10.52:106,0,11	1/1:13,0:10:18.89:182,19,0	0/1:15,0:15:31.06:199,0,31	0/1:8,0:7:2.18:99,0,2	1/1:16,0:15:19.22:170,19,0	1/1:10,0:7:5.86:46,6,0	1/1:15,5:19:29.53:245,30,0	0/1:9,0:9:10.48:57,0,10	1/1:14,0:14:3.01:30,3,0	1/1:17,0:17:20.94:187,21,0	1/1:22,0:20:52.14:387,52,0	1/1:10,0:10:11.46:188,11,0	1/1:12,0:12:16.06:180,16,0
chr10	40219624	.	AGC	A	4278.88	PASS	AB=0.996;AC=52;AF=0.929;AN=56;BaseQRankSum=-1.575;DP=607;FS=13.968;HRun=0;HaplotypeScore=133.6318;InbreedingCoeff=0.3200;MQ=64.16;MQ0=37;MQRankSum=-1.705;QD=8.63;ReadPosRankSum=1.521;VQSLOD=4.1055;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,19:19:15.05:228,15,0	1/1:9,0:9:20.73:165,21,0	0/0:110,0:26:30.22:0,30,290	0/1:140,0:37:46.89:47,0,204	1/1:17,0:17:22.51:182,23,0	1/1:16,0:16:5.90:41,6,0	0/1:5,0:5:0.02:66,0,0	1/1:23,0:22:45.05:325,45,0	1/1:17,0:17:5.86:34,6,0	1/1:12,1:13:36.36:296,36,0	1/1:15,0:15:15.35:118,15,0	1/1:14,0:14:2.90:16,3,0	1/1:3,7:10:17.95:199,18,0	1/1:6,3:9:21.02:255,21,0	1/1:11,0:10:8.96:80,9,0	1/1:8,1:8:14.97:130,15,0	1/1:12,0:9:18.38:153,18,0	1/1:14,0:14:10.22:213,10,0	1/1:8,0:7:17.91:141,18,0	1/1:17,0:16:23.32:173,23,0	1/1:10,0:7:5.73:46,6,0	1/1:20,0:19:29.57:232,30,0	1/1:9,0:9:7.85:65,8,0	1/1:14,0:14:2.90:16,3,0	1/1:17,0:17:23.94:201,24,0	1/1:21,1:20:57.19:457,57,0	1/1:10,0:10:26.89:216,27,0	1/1:12,0:12:22.23:185,22,0
chr10	40219786	.	G	GA	2020.23	PASS	AB=0.846;AC=16;AF=0.286;AN=56;BaseQRankSum=1.563;DP=429;FS=0.512;HRun=9;HaplotypeScore=116.3760;InbreedingCoeff=0.6147;MQ=58.47;MQ0=2;MQRankSum=-9.291;QD=11.48;ReadPosRankSum=-1.648;VQSLOD=2.4875;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,1:16:5.78:0,6,276	0/0:15,0:15:23.96:0,24,207	0/0:24,0:5:5.99:0,6,52	0/1:28,0:18:22.97:23,0,35	0/0:20,0:20:32.96:0,33,286	0/0:15,0:14:23.93:0,24,208	0/0:7,0:7:21:0,21,182	1/1:9,20:30:63.47:677,63,0	0/0:18,0:19:31.22:0,31,264	0/0:9,0:9:17.98:0,18,155	0/0:11,0:11:26.99:0,27,234	0/0:14,0:15:30.86:0,31,262	0/0:13,0:13:20.95:0,21,182	0/0:10,0:10:17.97:0,18,156	0/0:12,0:11:11.97:0,12,104	0/0:16,0:15:23.92:0,24,203	0/0:17,0:16:41.97:0,42,360	0/0:12,0:12:29.98:0,30,259	1/1:13,7:20:29.63:289,30,0	1/1:4,15:19:13.90:357,14,0	1/1:2,1:3:3.01:33,3,0	0/0:13,0:13:35.99:0,36,312	0/1:12,1:13:6.18:6,0,181	0/0:7,0:7:11.97:0,12,104	1/1:12,7:19:21.06:232,21,0	0/1:10,6:15:1.56:190,0,2	1/1:8,12:17:7.02:278,7,0	0/1:5,3:8:11.01:117,0,11
chr10	40219800	.	A	ATC	13407.50	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-3.126;DP=365;FS=0.000;HRun=0;HaplotypeScore=59.2708;InbreedingCoeff=0.9644;MQ=68.21;MQ0=7;MQRankSum=-5.005;QD=43.53;ReadPosRankSum=0.911;VQSLOD=5.8504;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:48.14:0,48,684	1/1:2,9:11:27.05:467,27,0	0/0:9,0:8:17.92:0,18,212	0/0:15,0:11:15.38:0,15,151	1/1:1,12:14:36.12:667,36,0	1/1:1,12:11:33.11:616,33,0	1/1:1,7:8:18.06:336,18,0	1/1:3,22:25:75.21:1355,75,0	1/1:2,16:18:36.12:672,36,0	1/1:0,10:10:24.08:449,24,0	1/1:0,10:11:30.10:561,30,0	1/1:0,13:13:39.13:730,39,0	0/0:9,0:9:24.06:0,24,332	0/0:7,0:7:18.06:0,18,265	1/1:3,7:10:15.05:280,15,0	1/1:2,10:12:30.10:559,30,0	1/1:2,16:18:39.13:729,39,0	1/1:0,11:11:30.10:560,30,0	1/1:4,17:21:29.31:871,29,0	1/1:4,12:16:42.14:777,42,0	1/1:2,4:6:9.03:168,9,0	1/1:1,13:14:42.13:753,42,0	1/1:0,12:12:30.10:560,30,0	1/1:1,7:7:15.05:280,15,0	1/1:1,10:11:27.09:504,27,0	1/1:1,15:15:39.11:680,39,0	1/1:5,14:16:29.69:555,30,0	1/1:1,5:6:15.05:280,15,0
chr10	40220562	.	T	TA	4651.79	PASS	AB=1.000;AC=31;AF=0.554;AN=56;BaseQRankSum=14.204;DP=477;FS=15.524;HRun=0;HaplotypeScore=103.5856;InbreedingCoeff=0.9012;MQ=77.09;MQ0=0;MQRankSum=0.031;QD=19.96;ReadPosRankSum=2.380;VQSLOD=5.2378;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,153,2095	1/1:3,4:7:17.14:154,17,0	0/1:23,0:17:57.71:58,0,90	0/0:25,0:20:8.92:0,9,195	1/1:2,12:16:18.64:310,19,0	1/1:4,16:20:53.79:536,54,0	1/1:2,7:8:20.96:199,21,0	0/0:17,0:17:48.97:0,49,383	1/1:3,14:17:25.47:401,25,0	1/1:9,7:16:23.29:295,23,0	1/1:8,10:18:33.89:334,34,0	1/1:4,10:14:16.53:273,17,0	0/0:18,0:18:48.15:0,48,654	0/0:19,0:19:54.18:0,54,755	1/1:6,8:14:22.33:306,22,0	1/1:2,8:10:29.90:276,30,0	1/1:0,13:13:39.09:400,39,0	1/1:4,9:13:19.24:305,19,0	0/0:15,0:15:44.10:0,44,379	0/0:14,0:14:39.67:0,40,323	0/0:13,0:13:33.88:0,34,217	1/1:5,2:7:16.50:128,17,0	1/1:7,9:16:20.45:291,20,0	1/1:9,11:20:30.97:387,31,0	0/0:14,0:14:29.87:0,30,274	0/0:22,0:22:36.16:0,36,417	0/0:27,0:27:71.64:0,72,509	0/0:5,0:5:8.26:0,8,65
chr10	40220563	.	T	TA	8063.45	PASS	AB=1.000;AC=48;AF=0.857;AN=56;BaseQRankSum=5.869;DP=500;FS=5.260;HRun=10;HaplotypeScore=101.2581;InbreedingCoeff=0.6791;MQ=75.00;MQ0=0;MQRankSum=-4.927;QD=19.81;ReadPosRankSum=-0.438;VQSLOD=4.8376;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,146,1176	1/1:7,0:7:17.94:165,18,0	0/1:23,0:17:16.27:16,0,57	0/1:23,0:19:12.87:13,0,129	1/1:16,0:16:38.89:370,39,0	1/1:22,0:22:62.62:593,63,0	1/1:13,0:12:28.77:257,29,0	1/1:3,17:20:45.02:447,45,0	1/1:20,0:20:40.96:500,41,0	1/1:18,0:18:38.86:363,39,0	1/1:18,0:18:38.58:386,39,0	1/1:14,0:14:34.31:343,34,0	0/0:18,0:18:50.83:0,51,402	0/0:20,0:20:50.93:0,51,419	1/1:16,0:16:30.50:356,31,0	1/1:11,0:11:32.95:321,33,0	1/1:14,0:14:42.07:432,42,0	1/1:13,0:13:27.87:347,28,0	1/1:5,11:16:32.95:335,33,0	1/1:8,8:16:8.43:283,8,0	1/1:1,13:14:33.08:352,33,0	1/1:7,0:7:17.94:158,18,0	1/1:17,0:17:31.04:328,31,0	1/1:21,0:21:32.54:406,33,0	1/1:3,9:13:20.89:206,21,0	1/1:11,10:22:36.10:419,36,0	1/1:10,16:26:48.39:604,48,0	1/1:2,3:5:6.02:64,6,0
chr10	40220659	.	G	GATAT	29869.28	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-8.486;DP=612;FS=1.180;HRun=0;HaplotypeScore=106.2630;InbreedingCoeff=0.9853;MQ=76.86;MQ0=0;MQRankSum=-7.474;QD=64.10;ReadPosRankSum=3.780;VQSLOD=7.1894;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,108,1888	1/1:4,12:17:39.13:1012,39,0	0/0:31,0:31:77.77:0,78,1321	0/0:28,0:26:65.48:0,65,1175	1/1:2,28:30:78.27:2076,78,0	1/1:2,24:28:63.22:1606,63,0	1/1:1,9:11:15.05:404,15,0	1/1:1,7:8:15.50:536,15,0	1/1:1,18:20:48.16:1285,48,0	1/1:4,24:30:87.24:2217,87,0	1/1:4,23:27:57.20:1519,57,0	1/1:1,17:18:45.15:1204,45,0	0/0:23,0:23:66.21:0,66,1214	0/0:25,0:25:75.24:0,75,1382	1/1:3,18:21:48.16:1291,48,0	1/1:1,12:13:39.13:1007,39,0	1/1:1,16:17:45.15:1213,45,0	1/1:3,9:12:24.08:635,24,0	1/1:2,13:15:45.06:1035,45,0	1/1:2,27:29:69.24:1837,69,0	1/1:1,14:15:30.10:797,30,0	1/1:1,17:18:54.19:1450,54,0	1/1:3,37:40:90.31:2395,90,0	1/1:1,24:25:54.18:1446,54,0	1/1:2,19:21:48.16:1283,48,0	1/1:3,18:21:60.21:1561,60,0	1/1:4,20:25:69.24:1746,69,0	1/1:0,5:5:12.04:316,12,0
chr10	40222668	.	CCACACACCCACACCCA	C	5499.84	PASS	AB=0.987;AC=21;AF=0.375;AN=56;BaseQRankSum=4.450;DP=520;FS=15.661;HRun=0;HaplotypeScore=197.1280;InbreedingCoeff=0.6881;MQ=64.13;MQ0=28;MQRankSum=-3.176;QD=30.22;ReadPosRankSum=3.186;VQSLOD=2.6812;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:36:67.01:0,67,1864	1/1:2,0:2:6.02:194,6,0	0/0:35,0:23:42.59:0,43,1133	0/0:32,0:22:29.92:0,30,802	1/1:13,0:12:15.51:374,16,0	0/1:12,0:12:41.10:41,0,67	0/0:23,0:23:15.60:0,16,127	0/0:19,0:18:40.94:0,41,1134	0/0:23,0:23:5.72:0,6,40	1/1:3,19:19:39.12:1048,39,0	1/1:11,0:10:14.99:338,15,0	0/1:27,0:27:99:155,0,182	0/0:13,0:13:36.10:0,36,1114	0/0:16,0:15:33.58:0,34,1283	1/1:10,0:10:23.61:639,24,0	1/1:14,0:13:35.98:986,36,0	1/1:19,0:18:9.03:304,9,0	1/1:16,0:16:45.05:1329,45,0	0/0:12,0:12:36.12:0,36,1076	0/0:11,0:11:27.07:0,27,1095	0/0:53,0:44:87.26:0,87,4015	1/1:1,11:12:3.01:33,3,0	0/0:15,0:15:9.01:0,9,121	0/1:23,0:22:58.66:59,0,77	0/0:11,0:11:26.87:0,27,1625	0/0:16,0:15:40.36:0,40,1466	0/0:10,0:10:27.07:0,27,997	0/0:10,0:10:30.10:0,30,1563
chr10	40222673	.	CACCCACACCCACACCCACACA	C	3502.18	PASS	AB=0.866;AC=15;AF=0.268;AN=56;BaseQRankSum=8.526;DP=513;FS=24.099;HRun=0;HaplotypeScore=226.1213;InbreedingCoeff=0.6656;MQ=60.15;MQ0=33;MQRankSum=-2.552;QD=29.93;ReadPosRankSum=3.792;VQSLOD=0.9965;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:36:64.90:0,65,2239	1/1:2,0:2:6.02:110,6,0	0/0:30,0:18:37.11:0,37,1241	0/0:27,0:17:31.69:0,32,859	0/1:11,1:11:1.42:121,0,1	0/0:13,0:13:6.42:0,6,82	0/0:21,0:21:40.69:0,41,399	0/0:16,0:15:42.13:0,42,1279	0/0:23,0:23:2.70:0,3,66	1/1:22,0:19:21.37:570,21,0	0/1:8,2:9:32.05:120,0,32	0/0:29,0:29:3.21:0,3,276	0/0:11,0:11:33.11:0,33,1350	0/0:14,0:13:33.58:0,34,1560	1/1:8,3:11:23.53:500,24,0	1/1:9,3:12:26.45:804,26,0	1/1:18,1:18:5.55:235,6,0	0/1:13,3:16:0.25:990,0,0	0/0:14,0:14:42.14:0,42,1351	0/0:15,0:13:30.09:0,30,1377	0/0:55,0:44:87.30:0,87,4897	1/1:11,1:12:3.01:53,3,0	0/0:15,0:15:9.03:0,9,197	0/0:23,0:20:33.07:0,33,349	0/0:13,0:13:30.10:0,30,2109	0/0:20,0:18:43.39:0,43,2040	0/0:9,0:9:24.08:0,24,1235	0/0:10,0:10:30.10:0,30,1849
chr10	40222674	.	ACC	A	955.52	PASS	AB=1.000;AC=18;AF=0.321;AN=56;BaseQRankSum=9.307;DP=513;FS=21.558;HRun=3;HaplotypeScore=115.5304;InbreedingCoeff=0.7727;MQ=59.76;MQ0=35;MQRankSum=-1.515;QD=6.64;ReadPosRankSum=2.008;VQSLOD=-0.7089;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:36:57.58:0,58,966	1/1:2,0:2:5.99:52,6,0	0/0:29,0:18:31.89:0,32,680	0/1:26,0:16:6.32:6,0,391	1/1:11,1:11:11.97:96,12,0	0/0:13,0:13:3.89:0,4,28	0/0:21,0:21:41.42:0,41,340	0/0:17,0:16:35.64:0,36,589	0/0:24,0:24:2.86:0,3,19	1/1:24,0:19:35.67:262,36,0	1/1:9,0:8:8.66:59,9,0	0/0:29,0:29:6.28:0,6,126	0/0:11,0:11:13.09:0,13,489	0/0:14,0:13:32.99:0,33,563	1/1:11,0:11:23.51:167,24,0	1/1:13,0:12:23.88:148,24,0	1/1:3,16:18:8.19:72,8,0	1/1:16,0:16:39.49:283,39,0	0/0:14,0:14:41.88:0,42,648	0/0:14,0:12:26.99:0,27,439	0/0:55,0:44:72.77:0,73,1447	0/1:12,0:12:0:0,0,0	0/0:14,1:15:4.62:0,5,47	0/0:23,0:20:29.45:0,29,220	0/0:13,0:13:30.09:0,30,521	0/0:19,0:17:18.98:0,19,571	0/0:10,0:10:24.03:0,24,373	0/0:10,0:10:30.10:0,30,562
chr10	40222676	.	CCACACCCACACCCA	C	4431.79	PASS	AB=1.000;AC=31;AF=0.554;AN=56;BaseQRankSum=6.855;DP=521;FS=7.928;HRun=0;HaplotypeScore=180.0728;InbreedingCoeff=0.8020;MQ=58.99;MQ0=35;MQRankSum=-1.473;QD=16.12;ReadPosRankSum=2.465;VQSLOD=3.2226;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:35:52.33:0,52,885	1/1:2,0:2:6.02:95,6,0	0/0:29,0:18:23.65:0,24,396	0/1:25,0:15:23.16:23,0,258	1/1:11,0:10:9.97:151,10,0	1/1:1,12:13:5.99:145,6,0	1/1:20,1:21:40.06:662,40,0	0/0:17,0:16:39.67:0,40,559	1/1:1,25:26:4.83:61,5,0	1/1:24,0:19:28.03:469,28,0	1/1:9,0:8:8.96:132,9,0	1/1:5,24:30:13.01:430,13,0	0/0:12,0:12:24.09:0,24,577	0/0:16,0:15:30.46:0,30,705	1/1:11,0:11:21.36:305,21,0	1/1:12,0:11:24.07:542,24,0	1/1:18,0:18:7.48:179,7,0	1/1:16,0:16:32.75:697,33,0	0/0:14,0:14:39.07:0,39,545	0/0:15,0:13:24.03:0,24,718	0/0:54,0:43:78.20:0,78,2657	1/1:13,0:13:3.01:38,3,0	1/1:3,12:15:2.02:6,2,0	1/1:26,2:25:22.23:495,22,0	0/0:14,0:14:29.73:0,30,1181	0/0:18,0:16:34:0,34,932	0/0:10,0:10:18.52:0,19,613	0/0:10,0:10:30.03:0,30,1039
chr10	40222686	.	ACC	A	1735	PASS	AB=0.980;AC=27;AF=0.482;AN=56;BaseQRankSum=7.661;DP=572;FS=2.173;HRun=3;HaplotypeScore=130.0539;InbreedingCoeff=0.3027;MQ=52.06;MQ0=54;MQRankSum=-2.063;QD=5.15;ReadPosRankSum=-0.948;VQSLOD=-0.2486;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:38:33.02:0,33,344	1/1:7,0:7:10.22:65,10,0	0/0:19,0:10:19.91:0,20,196	0/0:17,0:7:16.30:0,16,126	1/1:11,0:10:8.99:75,9,0	0/1:14,0:13:0.13:10,0,0	1/1:25,0:23:41.69:365,42,0	0/1:21,1:19:82.94:83,0,184	0/1:28,0:27:14.92:31,0,15	1/1:27,0:21:31.54:214,32,0	1/1:15,0:13:8.50:60,8,0	1/1:27,1:27:17.40:138,17,0	0/0:15,0:13:2.34:0,2,218	0/0:17,1:16:35.80:0,36,312	0/1:13,0:13:18.27:128,0,18	1/1:16,0:15:21.99:129,22,0	1/1:26,0:24:6.68:63,7,0	1/1:18,0:17:43.73:289,44,0	0/1:12,0:11:26.70:27,0,138	0/1:16,1:14:25.35:25,0,174	0/0:45,24:58:39.76:0,40,754	0/0:18,0:18:4.52:0,5,15	0/0:14,0:13:2.97:0,3,20	0/1:27,1:25:3.58:153,0,4	0/0:15,0:15:8.74:0,9,295	0/1:19,1:16:46.85:47,0,248	0/1:10,0:10:21.32:21,0,165	0/0:8,0:8:21.03:0,21,238
chr10	40224498	.	T	TG	2493.80	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=10.640;DP=674;FS=0.520;HRun=0;HaplotypeScore=68.8703;InbreedingCoeff=0.9998;MQ=86.58;MQ0=0;MQRankSum=-5.577;QD=40.88;ReadPosRankSum=1.738;VQSLOD=4.3097;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,33:33:84.29:1342,84,0	0/0:15,0:15:42.10:0,42,550	0/0:23,0:23:69.04:0,69,872	0/0:26,0:26:71.70:0,72,936	0/0:22,0:22:51.15:0,51,682	0/0:27,0:27:81.24:0,81,1085	0/0:23,0:22:69.22:0,69,948	0/0:24,0:24:69.23:0,69,952	0/0:27,0:27:78.26:0,78,1088	0/0:28,0:28:84.27:0,84,1130	0/0:23,0:23:60.19:0,60,816	0/0:29,0:29:84.28:0,84,1175	1/1:0,18:18:51.17:815,51,0	1/1:0,10:10:30.10:479,30,0	0/0:24,0:24:72.24:0,72,1006	0/0:23,0:23:69.22:0,69,947	0/0:27,0:27:78.26:0,78,1088	0/0:21,0:21:57.19:0,57,797	0/0:17,0:17:48.12:0,48,621	0/0:25,0:25:75.21:0,75,987	0/0:38,0:38:99:0,108,1485	0/0:28,0:28:78.25:0,78,1073	0/0:24,0:24:69.17:0,69,908	0/0:26,0:26:78.26:0,78,1088	0/0:23,0:23:69.22:0,69,947	0/0:23,0:23:69.21:0,69,921	0/0:30,0:29:90.29:0,90,1240	0/0:17,0:16:51.17:0,51,710
chr10	40224895	.	TTGTAA	T	2846.36	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=7.905;DP=758;FS=39.391;HRun=0;HaplotypeScore=146.6797;InbreedingCoeff=0.9988;MQ=61.66;MQ0=6;MQRankSum=-7.015;QD=46.66;ReadPosRankSum=2.356;VQSLOD=2.0197;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,22:27:56.90:1002,57,0	0/0:9,0:9:24.08:0,24,737	0/0:14,0:13:33.11:0,33,986	0/0:13,0:11:27.09:0,27,748	0/0:29,0:29:87.30:0,87,2610	0/0:21,0:21:60.21:0,60,1823	0/0:25,0:25:69.24:0,69,2078	0/0:38,0:37:99:0,105,3149	0/0:42,0:42:99:0,123,3720	0/0:30,0:30:75.26:0,75,2279	0/0:31,0:31:90.31:0,90,2707	0/0:29,0:29:78.27:0,78,2320	1/1:0,16:16:42.14:869,42,0	1/1:0,18:18:54.19:1118,54,0	0/0:32,0:32:87.30:0,87,2613	0/0:18,0:18:54.19:0,54,1639	0/0:27,0:27:78.27:0,78,2396	0/0:32,0:32:96.30:0,96,2848	0/0:23,0:20:51.17:0,51,1543	0/0:31,0:31:84.29:0,84,2581	0/0:34,0:34:99:0,102,2999	0/0:29,0:29:87.30:0,87,2646	0/0:39,0:39:99:0,111,3373	0/0:30,0:30:84.29:0,84,2576	0/0:30,0:30:87.30:0,87,2672	0/0:41,0:41:99:0,111,3302	0/0:36,0:36:96.33:0,96,2919	0/0:14,0:14:42.11:0,42,1155
chr10	40225833	.	CTTG	C	2922.46	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=11.337;DP=702;FS=10.054;HRun=0;HaplotypeScore=100.2152;InbreedingCoeff=0.9998;MQ=90.56;MQ0=0;MQRankSum=-6.216;QD=42.35;ReadPosRankSum=1.560;VQSLOD=5.0603;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,35:37:81.28:1427,81,0	0/0:11,0:11:30.10:0,30,709	0/0:33,0:33:96.29:0,96,2165	0/0:25,0:25:69.24:0,69,1566	0/0:18,0:18:54.19:0,54,1271	0/0:22,0:22:66.23:0,66,1562	0/0:20,0:20:57.20:0,57,1348	0/0:29,0:29:84.28:0,84,1913	0/0:22,0:22:66.23:0,66,1560	0/0:30,0:30:90.30:0,90,2085	0/0:15,0:15:39.13:0,39,919	0/0:25,0:25:75.26:0,75,1775	1/1:0,17:17:48.16:847,48,0	1/1:0,15:15:45.15:792,45,0	0/0:31,0:31:93.32:0,93,2199	0/0:18,0:18:54.19:0,54,1253	0/0:48,0:48:99:0,141,3333	0/0:16,0:16:48.15:0,48,1079	0/0:21,0:21:63.21:0,63,1428	0/0:24,0:24:72.24:0,72,1639	0/0:53,0:53:99:0,160,3712	0/0:29,0:29:84.28:0,84,1921	0/0:17,0:17:51.18:0,51,1182	0/0:35,0:35:99:0,102,2391	0/0:19,0:19:57.20:0,57,1317	0/0:17,0:17:51.16:0,51,1129	0/0:34,0:33:99:0,99,2339	0/0:21,0:21:60.21:0,60,1419
chr10	40228230	.	GAGAC	G	10884.69	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=1.549;DP=577;FS=1.075;HRun=0;HaplotypeScore=139.2067;InbreedingCoeff=0.8960;MQ=66.92;MQ0=1;MQRankSum=-1.991;QD=20.27;ReadPosRankSum=4.085;VQSLOD=4.8119;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:24,9:33:27.09:428,27,0	1/1:12,1:13:21.07:312,21,0	0/0:19,0:16:15.05:0,15,284	0/0:21,0:19:29.25:0,29,523	1/1:4,14:18:23.91:390,24,0	1/1:9,19:28:39.13:634,39,0	1/1:11,14:25:9.03:143,9,0	1/1:6,19:24:50.98:619,51,0	1/1:8,20:28:30.10:488,30,0	1/1:9,13:23:42.11:633,42,0	1/1:8,1:9:12.04:185,12,0	1/1:15,10:25:42.12:651,42,0	1/1:4,14:18:29.81:425,30,0	1/1:10,14:24:17.99:262,18,0	1/1:1,10:11:27.09:439,27,0	1/1:4,13:17:15.05:243,15,0	1/1:9,27:36:45.15:714,45,0	1/1:6,10:16:27.09:436,27,0	1/1:21,0:21:36.06:480,36,0	1/1:7,3:10:21.05:290,21,0	1/1:35,8:42:57.17:822,57,0	1/1:2,10:12:14.68:244,15,0	1/1:8,5:13:12.04:184,12,0	1/1:9,16:25:18.06:293,18,0	1/1:15,3:18:30.10:429,30,0	1/1:23,4:27:48.14:650,48,0	1/1:6,4:10:15.05:217,15,0	1/1:6,3:9:24.02:274,24,0
chr10	40228261	.	GCA	G	2203.55	PASS	AB=0.970;AC=25;AF=0.446;AN=56;BaseQRankSum=-2.900;DP=526;FS=13.166;HRun=0;HaplotypeScore=169.9782;InbreedingCoeff=0.1023;MQ=52.68;MQ0=3;MQRankSum=2.979;QD=6.37;ReadPosRankSum=-2.107;VQSLOD=2.1234;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:21:9.11:9,0,10	1/1:8,0:8:1.67:5,2,0	0/0:9,0:3:8.36:0,8,57	0/0:14,0:9:2.42:0,2,135	0/0:18,0:18:18.67:0,19,236	0/0:26,0:26:38.94:0,39,548	0/1:26,0:26:8.16:8,0,393	0/1:31,0:30:99:127,0,147	0/0:21,0:21:4.22:0,4,92	0/0:24,0:24:19.05:0,19,436	0/1:6,0:6:0.82:1,0,64	0/1:21,0:21:14.27:14,0,75	0/1:22,0:21:22.82:23,0,54	0/1:18,0:18:0.42:5,0,0	0/1:14,0:14:7.05:7,0,39	0/1:14,0:14:13:13,0,86	0/0:33,0:32:42.14:0,42,580	0/1:14,0:14:5.23:5,0,117	0/1:14,11:23:99:284,0,128	1/1:7,3:10:21.32:197,21,0	1/1:19,26:44:49.14:445,49,0	0/0:13,0:13:1.40:0,1,58	0/1:11,0:11:1.06:1,0,43	0/0:22,0:22:15.34:0,15,206	1/1:5,13:17:27.80:346,28,0	1/1:6,11:17:41.53:500,42,0	0/1:9,1:10:27.02:113,0,27	1/1:6,7:13:30.25:269,30,0
chr10	40228263	.	A	ACG	3224.03	PASS	AB=1.000;AC=18;AF=0.321;AN=56;BaseQRankSum=-9.081;DP=529;FS=0.000;HRun=0;HaplotypeScore=175.7138;InbreedingCoeff=0.6835;MQ=51.70;MQ0=2;MQRankSum=1.442;QD=15.07;ReadPosRankSum=-0.043;VQSLOD=3.4872;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:22:3.44:0,3,59	0/0:8,0:8:2.99:0,3,23	0/0:8,0:2:2.98:0,3,21	0/0:13,0:6:2.84:0,3,14	0/0:18,0:18:26.59:0,27,300	0/0:26,0:26:53.98:0,54,630	0/0:25,0:27:38.72:0,39,420	1/1:28,2:29:52.34:497,52,0	0/0:21,0:21:23.99:0,24,234	0/0:23,0:24:50.46:0,50,523	0/0:6,0:6:5.99:0,6,60	0/0:20,0:21:20.79:0,21,221	0/1:23,0:22:25.46:25,0,132	0/1:18,0:17:1.88:2,0,57	0/0:14,0:15:17.78:0,18,151	0/0:10,0:11:11.83:0,12,125	0/0:34,0:33:66.02:0,66,706	0/0:13,0:13:20.92:0,21,209	1/1:23,2:23:44.68:545,45,0	1/1:9,2:11:18.49:205,18,0	1/1:38,6:43:48.08:649,48,0	0/0:14,0:14:8.53:0,9,97	0/0:9,0:9:3.01:0,3,37	0/0:22,0:23:21:0,21,230	1/1:17,2:18:27.05:362,27,0	1/1:17,2:19:41.98:504,42,0	1/1:9,3:12:3.34:189,3,0	1/1:10,3:13:30.09:438,30,0
chr10	40228292	.	C	CGAGAGA	4165.71	PASS	AB=0.923;AC=39;AF=0.722;AN=54;BaseQRankSum=-0.445;DP=545;FS=21.025;HRun=0;HaplotypeScore=193.4663;InbreedingCoeff=0.0618;MQ=40.29;MQ0=16;MQRankSum=-1.785;QD=8.86;ReadPosRankSum=-0.780;VQSLOD=0.7676;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:17:2.60:10,3,0	0/1:3,7:10:11.99:12,0,43	0/0:16,0:3:8.74:0,9,51	./.	1/1:22,2:23:10.20:127,10,0	1/1:24,1:24:21.01:313,21,0	1/1:29,0:30:5.54:179,6,0	0/1:27,0:26:41.86:42,0,334	1/1:15,2:16:15.85:221,16,0	1/1:26,1:27:56.74:943,57,0	1/1:10,0:11:1.28:23,1,0	1/1:13,0:22:6.97:165,7,0	1/1:13,0:17:29.56:316,30,0	0/1:7,0:11:0.25:0,0,0	1/1:7,7:18:2.91:19,3,0	1/1:7,3:11:14.90:171,15,0	0/0:30,0:30:45.02:0,45,1105	1/1:8,2:10:14.93:269,15,0	0/1:20,0:19:65.09:65,0,158	0/1:15,0:14:39.48:72,0,39	0/1:35,0:33:76.91:149,0,77	1/1:14,2:13:3.32:117,3,0	1/1:6,0:10:2.99:23,3,0	1/1:20,0:21:8.92:127,9,0	0/0:17,0:15:5.96:0,6,44	0/1:23,0:22:28.36:386,0,28	0/1:19,0:19:39.76:363,0,40	0/1:13,0:13:30.16:53,0,30
chr10	40228296	.	A	ACACAC	92.52	PASS	AB=0.923;AC=4;AF=0.071;AN=56;BaseQRankSum=4.065;DP=539;FS=1.469;HRun=0;HaplotypeScore=195.3002;InbreedingCoeff=0.3836;MQ=39.87;MQ0=17;MQRankSum=-3.617;QD=1.57;ReadPosRankSum=-0.596;VQSLOD=2.4005;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:20,3:17:4.43:67,4,0	0/0:9,0:9:6.02:0,6,136	0/0:16,0:3:9.03:0,9,200	0/0:12,0:1:0:0,0,0	0/0:25,0:23:24.94:0,25,386	0/0:26,0:24:45.01:0,45,805	0/0:30,0:29:33.58:0,34,731	0/0:32,0:31:84.23:0,84,1593	0/0:18,0:16:22.59:0,23,345	0/0:26,0:26:67.10:0,67,1054	0/0:11,0:11:4.73:0,5,100	0/0:24,0:22:20.94:0,21,350	0/1:20,0:18:99:117,0,120	0/1:12,1:11:0.29:0,0,0	0/0:17,0:17:3.50:0,4,70	0/0:11,0:11:17.08:0,17,311	0/0:28,0:28:75.17:0,75,1555	0/0:10,0:10:19.59:0,20,355	0/0:18,0:17:45.07:0,45,866	0/0:16,0:15:21.03:0,21,453	0/0:33,0:30:42.14:0,42,929	0/0:15,0:12:10.11:0,10,123	0/0:10,0:10:2.96:0,3,70	0/0:24,0:22:14.93:0,15,249	0/0:15,0:13:17.95:0,18,296	0/0:22,0:21:51.14:0,51,974	0/0:19,0:19:32.95:0,33,559	0/0:13,0:13:33.11:0,33,719
chr10	40228303	.	G	GAGAGAC	3719.50	PASS	AB=1.000;AC=32;AF=0.615;AN=52;BaseQRankSum=-0.731;DP=534;FS=12.713;HRun=0;HaplotypeScore=173.5898;InbreedingCoeff=0.1159;MQ=40.25;MQ0=16;MQRankSum=-2.668;QD=8.94;ReadPosRankSum=2.956;VQSLOD=1.3279;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:17:0:0,0,0	0/0:11,0:11:8.74:0,9,67	./.	./.	1/1:17,0:16:1.28:37,1,0	0/1:24,0:22:32.89:141,0,33	0/0:33,0:31:8.33:0,8,74	0/1:29,0:28:33.08:318,0,33	0/1:19,0:17:37.06:59,0,37	0/1:27,0:27:97.12:373,0,97	0/0:12,0:12:5.35:0,5,32	0/1:26,0:24:54.50:54,0,85	1/1:21,0:18:15.01:179,15,0	1/1:13,0:12:2.24:20,2,0	0/1:17,0:17:0.03:1,0,0	0/1:11,0:11:15.46:62,0,15	0/0:29,0:29:59.19:0,59,1071	0/1:11,0:11:28.90:155,0,29	1/1:17,2:17:11.92:172,12,0	1/1:13,3:15:11.75:196,12,0	1/1:30,1:29:24.06:374,24,0	0/1:16,0:13:18.67:62,0,19	0/0:11,0:11:2.78:0,3,22	1/1:22,0:20:5.70:69,6,0	1/1:12,2:12:2.96:26,3,0	1/1:17,3:19:35.94:707,36,0	1/1:18,4:23:36.32:570,36,0	1/1:11,1:12:14.79:143,15,0
chr10	40228559	.	A	AG	9643.23	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-13.775;DP=557;FS=0.000;HRun=3;HaplotypeScore=51.6240;InbreedingCoeff=0.9987;MQ=86.50;MQ0=0;MQRankSum=-5.157;QD=36.12;ReadPosRankSum=3.702;VQSLOD=5.1370;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,99,1187	1/1:0,8:8:18.06:251,18,0	0/0:18,0:18:45.12:0,45,521	0/0:25,0:25:69.16:0,69,802	1/1:2,17:18:51.17:707,51,0	1/1:0,13:13:30.10:420,30,0	1/1:4,18:21:54.18:756,54,0	0/0:30,0:30:75.21:0,75,875	1/1:1,22:23:60.20:840,60,0	1/1:0,16:16:42.13:571,42,0	1/1:0,16:16:45.06:604,45,0	1/1:0,13:13:36.12:501,36,0	0/0:12,0:12:36.09:0,36,418	0/0:14,0:14:36.10:0,36,420	1/1:0,18:18:51.17:714,51,0	1/1:1,20:21:54.18:756,54,0	1/1:0,27:27:63.21:882,63,0	1/1:2,14:16:42.14:588,42,0	0/0:24,0:24:72.17:0,72,816	0/0:15,0:15:45.13:0,45,528	0/0:37,0:37:99:0,108,1283	1/1:1,17:18:48.16:669,48,0	1/1:1,19:20:54.18:755,54,0	1/1:0,17:17:45.15:630,45,0	0/0:18,0:18:45.14:0,45,540	0/0:27,0:27:81.25:0,81,969	0/0:21,0:21:63.19:0,63,755	0/0:12,0:12:36.11:0,36,432
chr10	40229450	.	TCACACACACA	T	1063.95	PASS	AB=0.942;AC=8;AF=0.154;AN=52;BaseQRankSum=1.278;DP=401;FS=25.153;HRun=0;HaplotypeScore=127.4656;InbreedingCoeff=0.5441;MQ=46.53;MQ0=33;MQRankSum=1.971;QD=11.44;ReadPosRankSum=-1.460;VQSLOD=0.7078;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:16:15.40:102,15,0	0/0:6,0:6:12.04:0,12,459	./.	./.	0/0:18,0:18:29.94:0,30,1245	1/1:14,1:14:16.17:329,16,0	0/1:20,1:18:99:144,0,183	0/0:9,0:8:3.01:0,3,59	1/1:18,2:18:29.96:563,30,0	0/0:13,0:12:24.08:0,24,916	0/0:10,0:10:21.07:0,21,882	0/0:15,0:15:30.05:0,30,590	0/0:13,0:13:18.87:0,19,224	0/1:15,0:11:71.95:72,0,109	0/0:18,0:16:33.11:0,33,1407	0/0:11,0:9:9.03:0,9,371	0/0:21,0:20:41.82:0,42,1278	0/0:22,0:19:37.01:0,37,1359	0/0:4,0:3:3.01:0,3,82	0/0:13,0:13:10.53:0,11,283	0/0:20,0:18:17.99:0,18,335	0/0:13,0:12:24.08:0,24,905	0/0:19,0:17:24.08:0,24,563	0/0:27,0:24:2.28:0,2,247	0/0:8,0:7:9.37:0,9,276	0/0:18,0:17:36.12:0,36,919	0/0:21,0:20:33.11:0,33,616	0/0:8,0:7:18.06:0,18,417
chr10	40229522	.	G	GT	1212.17	PASS	AB=0.929;AC=9;AF=0.161;AN=56;BaseQRankSum=-5.722;DP=379;FS=0.000;HRun=8;HaplotypeScore=59.7298;InbreedingCoeff=0.8566;MQ=73.41;MQ0=3;MQRankSum=0.609;QD=15.95;ReadPosRankSum=2.185;VQSLOD=3.5386;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:42.01:0,42,384	0/0:9,0:9:24:0,24,216	0/0:20,0:12:5.06:0,5,85	0/0:22,0:18:32.28:0,32,262	0/0:12,0:12:33.02:0,33,300	1/1:3,9:12:24.07:277,24,0	1/1:6,12:17:30.56:347,31,0	0/0:18,0:18:36.01:0,36,329	1/1:3,9:12:21.06:240,21,0	1/1:5,16:21:45.10:505,45,0	0/0:13,0:13:36.02:0,36,328	0/0:8,0:8:20.91:0,21,180	0/0:9,0:9:24.01:0,24,220	0/0:6,0:6:12:0,12,110	0/0:16,0:16:42:0,42,379	0/0:4,0:4:8.98:0,9,77	0/0:21,0:21:60.03:0,60,548	0/0:20,0:20:51.02:0,51,466	0/0:18,0:18:43.51:0,44,372	0/0:12,0:12:29.42:0,29,241	0/0:7,0:7:14.99:0,15,133	0/0:12,0:12:36.02:0,36,329	0/0:10,0:10:27:0,27,243	0/0:17,0:17:45.02:0,45,410	0/0:8,0:8:21.01:0,21,192	0/1:12,1:13:1.60:2,0,241	0/0:14,0:14:33.89:0,34,304	0/0:8,0:8:17.74:0,18,149
chr10	40229621	.	AT	A	1201.63	PASS	AB=0.925;AC=22;AF=0.407;AN=54;BaseQRankSum=-2.654;DP=357;FS=6.925;HRun=13;HaplotypeScore=61.5054;InbreedingCoeff=0.5796;MQ=76.14;MQ0=33;MQRankSum=2.403;QD=8.12;ReadPosRankSum=2.459;VQSLOD=2.4263;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:21:44.96:0,45,412	1/1:1,8:9:13.64:96,14,0	0/0:33,0:20:9.70:0,10,138	0/0:32,1:15:8.26:0,8,82	1/1:6,9:15:32.59:227,33,0	0/0:13,0:12:18.46:0,18,292	0/1:16,0:16:8.41:8,0,238	0/0:9,0:14:23.83:0,24,123	./.	1/1:4,11:13:32.76:237,33,0	1/1:3,4:6:11.66:87,12,0	0/0:5,0:5:14.84:0,15,124	0/1:6,0:6:6.29:6,0,76	0/0:6,0:5:15.02:0,15,142	1/1:4,5:7:17.81:122,18,0	1/1:2,3:5:0.98:37,1,0	1/1:7,18:23:25.84:281,26,0	1/1:12,6:13:2.39:174,2,0	0/0:7,0:16:35.67:0,36,196	0/0:2,0:5:8.64:0,9,48	0/0:2,0:8:3.52:0,4,30	1/1:0,4:4:11.93:87,12,0	0/1:8,1:8:3.94:4,0,117	0/0:13,2:13:4.51:0,5,190	0/0:5,0:10:20:0,20,105	0/1:3,2:8:23.49:23,0,54	0/0:6,0:9:23.08:0,23,140	0/0:4,0:6:14.20:0,14,72
chr10	40229717	.	GCC	G	5836.82	PASS	AB=1.000;AC=41;AF=0.732;AN=56;BaseQRankSum=-9.655;DP=347;FS=2.997;HRun=11;HaplotypeScore=49.5277;InbreedingCoeff=0.8101;MQ=66.70;MQ0=29;MQRankSum=-2.555;QD=21.62;ReadPosRankSum=1.709;VQSLOD=3.9082;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:12:12.48:0,12,43	1/1:1,5:6:12.03:128,12,0	0/1:18,0:13:6.60:7,0,173	0/0:7,0:1:2.97:0,3,20	1/1:2,7:9:21.05:224,21,0	1/1:4,11:15:10.84:326,11,0	1/1:1,13:14:39.10:415,39,0	1/1:4,6:8:18.03:192,18,0	1/1:1,5:5:15.04:160,15,0	1/1:2,5:7:18.04:188,18,0	1/1:3,10:12:30.08:319,30,0	0/0:1,0:5:12.20:0,12,42	0/0:1,0:8:12.48:0,12,43	0/0:0,0:13:22.46:0,22,77	1/1:5,13:15:36.08:383,36,0	1/1:0,6:7:5.96:119,6,0	1/1:4,23:22:66.17:702,66,0	1/1:9,18:25:48.10:511,48,0	1/1:3,14:17:42.10:445,42,0	1/1:2,6:8:15.04:160,15,0	1/1:4,16:19:39.09:415,39,0	1/1:0,5:5:15.04:160,15,0	0/0:7,0:12:14.97:0,15,51	0/0:7,0:11:14.85:0,15,51	1/1:0,4:4:12.03:128,12,0	1/1:2,15:17:42.09:442,42,0	1/1:4,12:13:33.07:351,33,0	1/1:3,2:3:6.02:64,6,0
chr10	40231675	.	C	CT	2085.21	PASS	AB=0.738;AC=15;AF=0.268;AN=56;BaseQRankSum=-3.800;DP=618;FS=0.418;HRun=12;HaplotypeScore=82.7327;InbreedingCoeff=0.4872;MQ=64.84;MQ0=2;MQRankSum=-1.304;QD=10.12;ReadPosRankSum=-0.003;VQSLOD=3.0661;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,1:33:36.19:0,36,424	1/1:1,8:9:15.02:145,15,0	0/0:21,0:14:3.94:0,4,70	0/0:9,0:9:7.39:0,7,52	0/1:14,18:32:9.37:332,0,9	0/0:25,0:27:62.97:0,63,429	0/0:20,2:23:13:0,13,242	0/0:21,0:26:34.91:0,35,220	0/0:25,0:25:59.55:0,60,431	0/1:18,8:26:29.15:207,0,29	1/1:5,17:22:8.88:213,9,0	0/0:21,1:23:6.35:0,6,280	0/0:16,0:17:31.75:0,32,220	0/0:18,0:18:38.54:0,39,271	1/1:3,9:12:24.04:233,24,0	1/1:4,8:12:20.82:179,21,0	1/1:6,24:35:6.75:502,7,0	0/1:13,9:22:70.41:188,0,70	0/0:20,0:21:45.26:0,45,304	0/0:26,1:31:39.48:0,39,424	0/0:19,0:19:29.73:0,30,214	0/1:12,12:26:46.30:258,0,46	0/0:21,1:24:28.11:0,28,335	0/0:17,0:18:40.69:0,41,284	0/0:27,0:28:67.52:0,68,478	0/0:20,0:21:32.72:0,33,239	0/0:23,3:26:23.87:0,24,311	0/1:9,1:10:5.33:5,0,128
chr10	40233277	.	ATGG	A	2741.60	PASS	AB=1.000;AC=38;AF=0.826;AN=46;BaseQRankSum=-5.294;DP=319;FS=2.581;HRun=0;HaplotypeScore=62.2746;InbreedingCoeff=-0.0200;MQ=38.52;MQ0=47;MQRankSum=3.282;QD=11.57;ReadPosRankSum=-1.616;VQSLOD=2.9357;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,0:9:17.75:193,18,0	0/0:2,2:4:0.47:0,0,1	./.	./.	0/0:7,0:6:0:0,0,0	1/1:4,9:11:2.37:8,2,0	1/1:24,0:19:51.09:636,51,0	1/1:5,2:4:6.02:75,6,0	1/1:14,0:13:5.83:230,6,0	0/1:18,0:17:71.86:72,0,105	1/1:3,0:3:9.03:118,9,0	1/1:11,0:11:14.79:183,15,0	1/1:7,0:6:9.03:117,9,0	1/1:6,0:4:10.63:88,11,0	./.	1/1:0,4:4:3.01:38,3,0	0/1:12,0:9:11.91:71,0,12	0/1:11,0:11:6.85:159,0,7	./.	./.	1/1:15,21:26:5.95:78,6,0	1/1:5,0:5:5.93:77,6,0	1/1:2,0:2:3.01:34,3,0	1/1:19,0:18:6.16:246,6,0	0/1:16,0:12:28.33:32,0,28	1/1:10,0:8:4.35:154,4,0	1/1:6,0:6:12.04:162,12,0	1/1:3,0:2:6.02:77,6,0
chr10	40233283	.	G	GTCA	275.88	PASS	AB=0.947;AC=8;AF=0.160;AN=50;BaseQRankSum=6.480;DP=352;FS=22.944;HRun=0;HaplotypeScore=83.4974;InbreedingCoeff=-0.0569;MQ=38.33;MQ0=50;MQRankSum=-4.836;QD=3.41;ReadPosRankSum=-0.207;VQSLOD=-0.0278;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:12,0:11:72.61:73,0,144	0/0:5,0:5:3.48:0,3,46	./.	0/0:35,0:4:5.68:0,6,82	1/1:7,0:6:2.68:11,3,0	0/1:13,1:12:33.09:42,0,33	0/0:30,0:25:62.97:0,63,623	0/0:8,0:5:15.02:0,15,175	0/0:15,0:14:24.35:0,24,297	0/1:16,1:16:83.40:117,0,83	0/0:4,0:4:9.01:0,9,86	0/0:11,0:11:18.03:0,18,186	0/0:7,0:6:15.04:0,15,178	0/0:7,0:5:14.98:0,15,165	./.	0/0:5,0:5:6:0,6,55	0/0:10,0:9:23.98:0,24,283	0/0:13,0:13:11.87:0,12,192	0/0:3,0:2:3.01:0,3,33	./.	0/0:35,0:27:17.99:0,18,187	0/0:5,0:5:8.89:0,9,75	0/1:2,0:2:10.95:11,0,30	0/0:21,0:20:24.78:0,25,309	0/1:18,1:15:19.08:104,0,19	0/1:8,1:7:41.28:41,0,118	0/0:8,0:8:18:0,18,181	0/0:3,0:2:6.01:0,6,62
chr10	40236874	.	CA	C	273.02	PASS	AC=8;AF=0.400;AN=20;BaseQRankSum=0.323;DP=363;FS=0.000;HRun=13;HaplotypeScore=34.2759;InbreedingCoeff=0.6327;MQ=14.71;MQ0=291;MQRankSum=0.627;QD=4.48;ReadPosRankSum=2.640;VQSLOD=-0.2892;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	0/0:6,1:2:2.97:0,3,20	./.	./.	0/0:19,1:15:14.81:0,15,119	./.	./.	./.	./.	0/0:13,0:6:7.26:0,7,61	0/0:22,0:13:6.01:0,6,58	./.	./.	./.	./.	./.	./.	./.	./.	1/1:3,15:10:23.82:175,24,0	./.	0/0:10,1:6:2.84:0,3,14	0/0:11,1:4:6.01:0,6,58	./.	1/1:4,13:8:19.93:137,20,0	1/1:6,9:2:2.98:22,3,0	./.	1/1:3,5:5:5.97:44,6,0
chr10	40239725	.	ATGTGTGTGTGTGTGTGTG	A	59.37	PASS	AC=6;AF=0.120;AN=50;BaseQRankSum=1.282;DP=576;FS=0.000;HRun=0;HaplotypeScore=235.7014;InbreedingCoeff=0.3857;MQ=66.71;MQ0=12;MQRankSum=-1.407;QD=0.90;ReadPosRankSum=-0.906;VQSLOD=2.5162;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:34:24.03:0,24,314	./.	./.	./.	0/0:20,0:20:12.04:0,12,366	0/0:20,0:20:17.16:0,17,193	0/0:28,0:28:7.73:0,8,77	0/0:26,0:26:7.85:0,8,67	0/0:12,0:12:3.01:0,3,30	0/0:13,0:12:3.01:0,3,100	0/0:10,0:10:6.02:0,6,329	1/1:12,0:14:3.01:126,3,0	0/0:14,0:14:6.02:0,6,148	0/0:15,0:16:5.35:0,5,284	0/0:17,0:17:21.96:0,22,901	0/0:20,0:24:12.51:0,13,406	0/0:22,0:21:18.06:0,18,533	0/0:22,0:22:24.04:0,24,1105	0/0:25,0:25:4.73:0,5,103	0/0:13,0:12:9.02:0,9,214	0/0:50,0:50:33.11:0,33,868	0/0:7,0:7:3.01:0,3,126	1/1:13,0:17:2.99:25,3,0	1/1:28,7:34:0.04:1,0,0	0/0:15,0:14:9.03:0,9,244	0/0:18,0:17:17.85:0,18,401	0/0:15,0:15:9.03:0,9,280	0/0:8,0:7:12.04:0,12,393
chr10	40241832	.	CTT	C	2820.51	PASS	AB=0.717;AC=20;AF=0.357;AN=56;BaseQRankSum=1.932;DP=517;FS=10.491;HRun=14;HaplotypeScore=74.9425;InbreedingCoeff=0.7001;MQ=72.33;MQ0=6;MQRankSum=1.164;QD=13.30;ReadPosRankSum=3.236;VQSLOD=1.8030;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:33:70.94:0,71,896	1/1:2,6:8:14.99:139,15,0	0/0:25,0:17:29.09:0,29,246	0/1:19,0:15:23.78:24,0,97	1/1:5,23:28:32.83:474,33,0	0/1:7,1:17:21.02:21,0,77	0/0:6,0:17:9.83:0,10,68	0/0:34,0:30:66.02:0,66,785	0/1:7,1:11:11.82:12,0,38	1/1:2,15:17:41.98:388,42,0	1/1:4,11:17:11.28:202,11,0	0/0:3,0:11:17.47:0,17,61	0/0:11,0:13:33.08:0,33,418	0/0:15,0:15:29.89:0,30,334	1/1:4,18:23:47.72:428,48,0	0/1:1,7:7:0.17:146,0,0	1/1:6,26:33:70.03:639,70,0	1/1:5,18:23:32.75:451,33,0	0/0:22,0:23:47.03:0,47,528	0/0:24,0:26:45.91:0,46,534	0/0:11,0:11:24.95:0,25,308	1/1:3,4:7:11.89:102,12,0	0/0:7,0:17:28.16:0,28,115	0/0:2,0:6:7.49:0,7,26	0/0:21,0:25:52.62:0,53,640	0/0:16,0:17:24.07:0,24,446	0/0:20,0:21:50.03:0,50,566	0/0:6,0:6:15:0,15,188
chr10	40243399	.	ATTT	A	1433.19	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.172;DP=466;FS=8.937;HRun=11;HaplotypeScore=78.5087;InbreedingCoeff=0.9539;MQ=63.23;MQ0=2;MQRankSum=-6.903;QD=29.86;ReadPosRankSum=1.943;VQSLOD=2.3858;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,11:13:30.08:394,30,0	0/0:14,0:14:36.12:0,36,712	0/0:8,0:6:12.04:0,12,243	0/0:8,0:8:9.03:0,9,182	0/0:24,0:25:69.13:0,69,1225	0/0:12,0:12:27.09:0,27,510	0/0:11,0:11:27.06:0,27,490	0/0:31,0:32:81.16:0,81,1424	0/0:11,0:11:30.10:0,30,598	0/0:30,0:28:78.27:0,78,1565	0/0:19,0:19:48.16:0,48,954	0/0:14,0:14:36.12:0,36,689	1/1:3,18:19:51.14:670,51,0	1/1:0,13:13:39.13:512,39,0	0/0:7,0:7:18.02:0,18,317	0/0:15,0:15:30.10:0,30,606	0/0:21,0:21:57.20:0,57,1137	0/0:22,0:23:60.16:0,60,1146	0/0:20,0:21:45.13:0,45,862	0/0:17,0:19:51.11:0,51,877	0/0:13,0:13:30.09:0,30,537	0/0:8,0:8:21.07:0,21,409	0/0:16,0:16:36.12:0,36,705	0/0:5,0:5:12.43:0,12,156	0/0:20,0:20:51.17:0,51,992	0/0:27,0:27:69.23:0,69,1352	0/0:22,0:22:63.21:0,63,1234	0/0:16,0:16:45.14:0,45,874
chr10	40243425	.	ATT	A	877.47	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=7.270;DP=418;FS=12.374;HRun=4;HaplotypeScore=63.1892;InbreedingCoeff=0.8882;MQ=48.38;MQ0=11;MQRankSum=-4.140;QD=19.08;ReadPosRankSum=-1.137;VQSLOD=-0.0240;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,10:10:23.76:201,24,0	0/0:12,0:11:30.09:0,30,503	0/0:10,0:4:12.04:0,12,196	0/0:6,1:1:3:0,3,26	0/0:27,0:27:51.05:0,51,853	0/0:10,0:10:24.08:0,24,449	0/0:9,0:9:24.04:0,24,412	0/0:24,0:19:57.15:0,57,887	0/0:9,0:9:21.06:0,21,364	0/0:29,0:27:75.17:0,75,1248	0/0:18,0:18:42.10:0,42,749	0/0:11,0:11:24.07:0,24,419	1/1:2,15:13:36.05:487,36,0	1/1:6,9:12:29.91:331,30,0	0/0:8,0:8:12:0,12,157	0/0:12,0:12:30.03:0,30,462	0/0:21,0:21:60.17:0,60,1086	0/0:20,0:19:57.14:0,57,1001	0/0:24,0:20:51.14:0,51,801	0/0:16,0:16:45.15:0,45,813	0/0:9,0:9:27.09:0,27,506	0/0:7,0:7:9.02:0,9,111	0/0:12,0:12:24.07:0,24,421	0/0:4,0:4:12.04:0,12,222	0/0:18,0:18:51.16:0,51,899	0/0:20,0:20:57.19:0,57,1031	0/0:23,0:23:69.18:0,69,1196	0/0:11,0:11:33.10:0,33,586
chr10	40243553	.	C	CG	382.23	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.614;DP=405;FS=14.069;HRun=0;HaplotypeScore=72.2231;InbreedingCoeff=0.7622;MQ=45.71;MQ0=15;MQRankSum=-1.756;QD=22.48;ReadPosRankSum=1.272;VQSLOD=4.2814;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,14:13:36.12:477,36,0	0/0:5,0:4:12.04:0,12,156	0/0:4,0:3:9.03:0,9,117	0/0:6,0:4:9.03:0,9,123	0/0:13,0:11:30.10:0,30,388	0/0:18,0:17:30.10:0,30,389	0/0:11,0:9:24.08:0,24,311	0/0:18,0:11:33.11:0,33,457	0/0:14,0:12:24.08:0,24,311	0/0:11,0:11:30.09:0,30,369	0/0:13,0:13:36.12:0,36,467	0/0:13,0:12:21.07:0,21,272	0/0:12,0:11:15.05:0,15,193	0/0:17,0:15:33.11:0,33,426	0/0:17,0:14:27.09:0,27,350	0/0:12,0:10:24.06:0,24,292	0/0:15,0:14:33.11:0,33,424	0/0:11,0:6:8.79:0,9,117	0/0:23,0:18:51.13:0,51,690	0/0:19,0:18:45.15:0,45,627	0/0:28,0:26:48.14:0,48,653	0/0:9,0:9:24.08:0,24,311	0/0:8,0:8:9:0,9,117	0/0:15,0:14:18.06:0,18,233	0/0:16,0:14:33.11:0,33,462	0/0:20,0:20:60.20:0,60,836	0/0:28,0:27:78.26:0,78,1082	0/0:12,0:11:33.08:0,33,441
chr10	40243622	.	CTGTG	C	1767.32	PASS	AB=0.712;AC=15;AF=0.288;AN=52;BaseQRankSum=-3.766;DP=573;FS=3.838;HRun=0;HaplotypeScore=125.9520;InbreedingCoeff=0.4347;MQ=59.55;MQ0=14;MQRankSum=2.875;QD=9.06;ReadPosRankSum=3.730;VQSLOD=2.8611;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:17,2:28:66.74:67,0,70	0/0:7,0:7:6.02:0,6,105	0/0:44,0:20:9.03:0,9,192	0/0:41,0:19:6.02:0,6,104	0/0:12,0:25:3.40:0,3,43	./.	0/0:18,0:17:14.68:0,15,192	./.	0/0:3,0:12:3.01:0,3,43	0/0:19,0:19:32.99:0,33,486	0/0:12,0:12:2.99:0,3,23	0/0:18,0:18:3.01:0,3,47	0/1:9,2:20:28.27:122,0,28	0/0:8,0:12:11.23:0,11,61	0/0:4,0:12:3.01:0,3,50	0/0:14,0:14:0.47:0,0,1	0/0:22,0:21:15.05:0,15,280	0/0:10,0:15:20.93:0,21,272	1/1:16,1:18:6.01:75,6,0	0/1:12,4:17:3.47:86,0,3	1/1:18,14:33:13.71:346,14,0	0/0:5,0:12:3.01:0,3,52	0/0:5,0:17:3.01:0,3,52	0/0:11,0:30:3.01:0,3,48	1/1:11,9:21:15.05:237,15,0	1/1:16,11:29:31.75:553,32,0	1/1:13,11:23:15.45:367,15,0	1/1:4,1:5:6.01:75,6,0
chr10	40243623	.	T	TGTGTGTGTGCGTGC	4824.76	PASS	AB=0.940;AC=24;AF=0.429;AN=56;BaseQRankSum=3.193;DP=575;FS=7.510;HRun=0;HaplotypeScore=209.6757;InbreedingCoeff=0.4458;MQ=58.67;MQ0=16;MQRankSum=-5.077;QD=19.38;ReadPosRankSum=-0.145;VQSLOD=2.9612;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:30:51.15:0,51,1229	0/1:7,0:7:2.92:70,0,3	0/0:46,0:20:42.01:0,42,694	0/0:44,0:19:42.14:0,42,834	0/1:28,0:25:19.67:158,0,20	1/1:16,0:16:3.01:186,3,0	1/1:18,0:17:24.07:514,24,0	0/0:24,0:24:56.68:0,57,973	1/1:10,0:10:3.01:177,3,0	0/1:20,0:20:23.48:586,0,23	0/1:7,0:16:18.98:144,0,19	1/1:5,13:19:6.49:365,6,0	0/0:20,0:20:27.09:0,27,747	0/0:12,0:12:18.04:0,18,379	0/1:13,0:13:19.17:52,0,19	1/1:15,0:15:4.43:23,4,0	0/1:23,0:22:29.39:724,0,29	1/1:13,0:13:9.48:699,9,0	0/0:19,0:19:43.82:0,44,725	0/0:17,0:17:33.11:0,33,696	0/0:34,0:34:57.18:0,57,1325	1/1:10,0:10:3.01:168,3,0	1/1:16,0:15:12.04:588,12,0	1/1:25,0:24:8.44:370,8,0	0/0:21,0:21:36.10:0,36,816	0/0:29,0:29:75.05:0,75,1651	0/0:24,0:23:51.10:0,51,1164	0/0:5,0:5:9.03:0,9,224
chr10	40245099	.	GCACACACACA	G	3009.62	PASS	AB=0.802;AC=23;AF=0.442;AN=52;BaseQRankSum=4.773;DP=472;FS=15.069;HRun=0;HaplotypeScore=154.0513;InbreedingCoeff=0.3326;MQ=60.59;MQ0=9;MQRankSum=-8.189;QD=13.87;ReadPosRankSum=-1.145;VQSLOD=1.9011;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:24:30.10:0,30,638	1/1:5,3:9:9.03:247,9,0	./.	./.	1/1:10,3:13:5.64:56,6,0	0/0:18,0:18:24.08:0,24,776	0/0:16,0:18:21.07:0,21,706	0/0:31,0:31:9.03:0,9,119	0/0:8,0:8:15.05:0,15,649	1/1:9,6:15:5.24:261,5,0	1/1:7,3:11:9.03:195,9,0	0/0:11,0:15:21.07:0,21,507	0/0:7,0:7:15.05:0,15,566	0/0:17,0:17:21.07:0,21,666	0/1:12,4:17:8.09:150,0,8	1/1:6,9:17:21.07:572,21,0	1/1:8,5:13:6.02:178,6,0	0/1:15,3:17:52.16:169,0,52	0/1:8,0:9:17.96:23,0,18	0/1:8,1:13:12.15:110,0,12	0/0:24,0:24:3.01:0,3,38	1/1:10,10:19:21.07:622,21,0	0/0:13,0:15:21.07:0,21,558	0/0:23,0:28:57.19:0,57,1534	0/1:12,5:18:16.50:213,0,17	0/1:16,1:18:99:176,0,126	0/1:10,1:15:41.95:189,0,42	1/1:9,0:10:3:28,3,0
chr10	40245387	.	T	TA	1134.10	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-1.448;DP=697;FS=13.611;HRun=1;HaplotypeScore=137.1654;InbreedingCoeff=0.9207;MQ=85.75;MQ0=0;MQRankSum=-4.494;QD=30.65;ReadPosRankSum=-2.718;VQSLOD=1.5132;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,34:37:87.17:1229,87,0	0/0:7,0:7:14.31:0,14,75	0/0:28,0:28:84.23:0,84,1062	0/0:27,0:27:75.14:0,75,905	0/0:25,0:25:66.99:0,67,389	0/0:27,0:27:50.44:0,50,378	0/0:31,0:31:36.62:0,37,389	0/0:38,0:38:69.02:0,69,420	0/0:22,0:22:58.01:0,58,324	0/0:29,0:29:54.30:0,54,382	0/0:11,0:11:31.90:0,32,186	0/0:33,0:33:99:0,99,1284	0/0:21,0:21:60.93:0,61,354	0/0:21,0:21:33.79:0,34,296	0/0:29,0:29:57.91:0,58,414	0/0:26,0:26:75.50:0,75,428	0/0:36,0:36:99:0,105,583	0/0:20,0:20:55.02:0,55,324	0/0:13,0:13:8.35:0,8,133	0/0:26,0:26:72.43:0,72,452	0/0:41,0:41:99:0,119,666	0/0:20,0:20:38.32:0,38,313	0/0:18,0:18:54.18:0,54,700	0/0:30,0:30:90.25:0,90,1145	0/0:21,0:21:58.72:0,59,380	0/0:26,0:26:71.34:0,71,367	0/0:21,0:21:52.40:0,52,305	0/0:13,0:13:38.10:0,38,238
chr10	40245424	.	AC	A	513.35	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.925;DP=698;FS=1.683;HRun=2;HaplotypeScore=107.1508;InbreedingCoeff=0.9979;MQ=87.76;MQ0=0;MQRankSum=-5.446;QD=15.56;ReadPosRankSum=1.294;VQSLOD=3.7747;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,27:33:70.79:608,71,0	0/0:8,0:8:24.08:0,24,360	0/0:28,0:28:84.26:0,84,1199	0/0:26,0:26:69.21:0,69,1014	0/0:26,0:26:78.23:0,78,1123	0/0:26,0:26:78.26:0,78,1169	0/0:27,0:27:81.27:0,81,1214	0/0:27,0:27:75.25:0,75,1106	0/0:24,0:24:72.24:0,72,1079	0/0:22,0:22:57.19:0,57,854	0/0:18,0:18:54.17:0,54,787	0/0:38,0:38:99:0,108,1617	0/0:25,0:25:72.23:0,72,1055	0/0:25,0:25:75.24:0,75,1094	0/0:27,0:27:81.27:0,81,1213	0/0:23,0:23:69.23:0,69,1034	0/0:38,0:38:99:0,114,1706	0/0:15,0:15:45.11:0,45,649	0/0:24,0:24:66.19:0,66,947	0/0:18,0:18:54.18:0,54,808	0/0:38,0:38:99:0,108,1577	0/0:23,0:23:66.22:0,66,974	0/0:21,0:21:60.20:0,60,898	0/0:37,0:37:99:0,111,1643	0/0:19,0:19:54.09:0,54,739	0/0:23,0:23:69.23:0,69,1033	0/0:24,0:24:66.18:0,66,961	0/0:15,0:15:42.14:0,42,624
chr10	40245427	.	AGT	A	680.25	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.226;DP=697;FS=1.687;HRun=0;HaplotypeScore=117.6752;InbreedingCoeff=0.9979;MQ=88.40;MQ0=0;MQRankSum=-6.079;QD=22.68;ReadPosRankSum=1.489;VQSLOD=4.4129;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,27:30:71.86:775,72,0	0/0:8,0:8:24.08:0,24,463	0/0:29,0:29:84.20:0,84,1494	0/0:24,0:24:60.20:0,60,1128	0/0:26,0:26:78.27:0,78,1505	0/0:26,0:26:78.27:0,78,1485	0/0:30,0:30:87.28:0,87,1638	0/0:26,0:26:75.26:0,75,1429	0/0:26,0:26:75.26:0,75,1448	0/0:22,0:22:63.21:0,63,1176	0/0:19,0:19:57.20:0,57,1089	0/0:38,0:38:99:0,105,1995	0/0:23,0:23:63.22:0,63,1199	0/0:26,0:26:78.27:0,78,1496	0/0:28,0:28:81.28:0,81,1548	0/0:23,0:23:69.22:0,69,1300	0/0:37,0:37:99:0,105,2028	0/0:14,0:14:42.14:0,42,811	0/0:23,0:23:69.23:0,69,1294	0/0:19,0:19:54.19:0,54,1034	0/0:34,0:34:99:0,102,1935	0/0:24,0:24:69.21:0,69,1281	0/0:20,0:20:60.21:0,60,1158	0/0:36,0:36:99:0,105,2018	0/0:20,0:20:54.17:0,54,1009	0/0:25,0:25:75.21:0,75,1404	0/0:26,0:26:72.25:0,72,1388	0/0:15,0:15:45.15:0,45,868
chr10	40245753	.	GGCT	G	15409.14	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=17.324;DP=586;FS=1.730;HRun=0;HaplotypeScore=149.3162;InbreedingCoeff=0.9928;MQ=71.66;MQ0=1;MQRankSum=-11.920;QD=51.71;ReadPosRankSum=1.037;VQSLOD=6.2459;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,39:39:99:1842,99,0	0/0:13,0:13:39.13:0,39,960	0/0:15,0:15:44.98:0,45,1012	0/0:17,0:17:41.46:0,41,940	0/0:23,0:23:69.24:0,69,1678	1/1:0,19:19:57.20:1061,57,0	1/1:0,16:16:48.16:891,48,0	1/1:0,21:21:60.21:1116,60,0	1/1:1,25:25:69.24:1283,69,0	0/0:28,0:28:81.28:0,81,1998	0/0:22,0:22:66.18:0,66,1565	0/0:18,0:18:51.18:0,51,1244	1/1:0,17:17:51.17:945,51,0	1/1:0,18:18:48.16:894,48,0	0/0:21,0:21:63.22:0,63,1491	0/0:25,0:25:75.26:0,75,1848	0/0:20,0:20:60.21:0,60,1479	0/0:21,1:22:10.46:0,10,1434	1/1:0,16:17:45.15:806,45,0	1/1:0,25:25:75.26:1390,75,0	1/1:0,10:10:18.06:333,18,0	0/0:28,0:28:84.28:0,84,2017	0/0:20,0:20:54.19:0,54,1260	0/0:16,0:16:42.14:0,42,983	1/1:0,23:23:66.23:1224,66,0	1/1:0,31:31:93.32:1728,93,0	1/1:0,27:27:75.26:1394,75,0	1/1:0,9:9:27.09:502,27,0
chr10	40246356	.	GGT	G	267.97	PASS	AC=2;AF=0.038;AN=52;BaseQRankSum=0.167;DP=442;FS=3.275;HRun=0;HaplotypeScore=97.1018;InbreedingCoeff=0.7310;MQ=44.19;MQ0=20;MQRankSum=-1.261;QD=17.86;ReadPosRankSum=0.183;VQSLOD=3.2871;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,10:15:27.08:361,27,0	0/0:5,0:5:15.05:0,15,270	./.	./.	0/0:15,0:13:30.10:0,30,539	0/0:15,0:14:21.07:0,21,378	0/0:15,0:10:18.06:0,18,323	0/0:38,0:32:90.22:0,90,1532	0/0:16,0:16:36.11:0,36,618	0/0:22,0:19:54.19:0,54,972	0/0:13,0:13:27.07:0,27,456	0/0:8,0:7:9.03:0,9,161	0/0:14,0:14:24.04:0,24,432	0/0:18,0:15:24.08:0,24,426	0/0:9,0:9:9.03:0,9,162	0/0:17,0:17:45.15:0,45,800	0/0:32,0:32:60.06:0,60,1049	0/0:24,0:22:54.18:0,54,957	0/0:20,0:13:33.11:0,33,582	0/0:15,0:15:39.13:0,39,692	0/0:17,0:15:18.06:0,18,323	0/0:9,0:9:21.07:0,21,378	0/0:11,0:11:21.07:0,21,375	0/0:8,0:8:15.05:0,15,270	0/0:23,0:22:48.16:0,48,874	0/0:24,0:22:54.15:0,54,937	0/0:34,0:33:69.24:0,69,1215	0/0:5,0:5:3.01:0,3,54
chr10	40246410	.	TA	T	1425.32	PASS	AB=0.846;AC=19;AF=0.339;AN=56;BaseQRankSum=-9.238;DP=355;FS=5.548;HRun=13;HaplotypeScore=90.9545;InbreedingCoeff=0.6232;MQ=51.93;MQ0=23;MQRankSum=6.091;QD=9.20;ReadPosRankSum=1.838;VQSLOD=3.1594;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:3,0:17:31.11:0,31,150	1/1:0,6:6:14.91:109,15,0	0/0:8,0:3:5.04:0,5,35	0/1:14,0:6:6.11:6,0,60	1/1:4,12:14:9.57:227,10,0	0/0:11,0:10:23.13:0,23,142	0/0:9,0:7:11.57:0,12,63	0/1:14,0:13:26.62:36,0,27	0/0:7,0:7:17.39:0,17,109	1/1:9,11:18:9.87:218,10,0	1/1:4,9:12:23.78:167,24,0	0/0:7,0:10:19.90:0,20,110	0/0:9,0:8:11.58:0,12,62	0/0:13,0:12:23.42:0,23,155	0/1:2,4:6:5.59:54,0,6	1/1:3,6:9:5.37:135,5,0	1/1:11,15:25:11.82:240,12,0	1/1:5,21:24:39.68:377,40,0	0/0:12,0:8:6.48:0,6,43	0/0:7,0:7:16.56:0,17,74	0/0:7,0:6:0.01:0,0,10	1/1:0,2:2:5.97:44,6,0	0/0:1,0:5:8.52:0,9,43	0/0:3,1:8:4.40:0,4,48	0/0:22,0:21:19.88:0,20,143	0/0:16,0:16:23.66:0,24,125	0/0:22,0:25:16.56:0,17,154	0/0:8,0:7:16.14:0,16,67
chr10	40246420	.	A	AAAG	1478.76	PASS	AB=0.797;AC=26;AF=0.464;AN=56;BaseQRankSum=4.761;DP=385;FS=12.763;HRun=0;HaplotypeScore=111.3043;InbreedingCoeff=-0.0207;MQ=57.93;MQ0=15;MQRankSum=-5.288;QD=5.13;ReadPosRankSum=1.752;VQSLOD=1.9071;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:9.75:0,10,57	0/1:6,0:6:6.96:7,0,85	0/0:8,0:4:12.01:0,12,116	0/0:20,0:11:22.96:0,23,232	0/0:16,0:15:44.70:0,45,380	0/1:3,0:14:40.96:180,0,41	0/1:2,2:10:5.48:121,0,5	0/1:7,0:14:19.73:20,0,121	0/1:4,1:9:30.44:159,0,30	0/1:17,0:15:52.68:53,0,168	0/1:14,0:13:13.93:14,0,164	0/0:12,0:11:14.01:0,14,85	1/1:4,0:9:12.02:163,12,0	0/1:5,0:14:50.59:170,0,51	0/1:8,0:8:6.97:7,0,80	0/0:9,0:9:1.58:0,2,150	0/1:27,0:24:18.28:18,0,288	0/1:27,0:25:31.44:31,0,272	1/1:12,0:13:12.50:152,13,0	1/1:3,0:8:5.55:57,6,0	1/1:6,0:6:10.21:72,10,0	0/0:5,0:5:14.99:0,15,127	0/0:7,0:7:7.42:0,7,55	0/1:9,0:8:5.36:5,0,14	0/1:6,0:19:7.30:88,0,7	1/1:7,0:18:20.41:190,20,0	0/1:6,0:25:31.70:98,0,32	1/1:4,0:9:14.23:48,14,0
chr10	40246432	.	G	GA	3816.03	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=8.499;DP=378;FS=22.974;HRun=3;HaplotypeScore=91.4309;InbreedingCoeff=0.8705;MQ=62.66;MQ0=5;MQRankSum=-6.810;QD=32.07;ReadPosRankSum=2.284;VQSLOD=1.9002;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:48.13:0,48,562	0/0:9,0:9:24.07:0,24,285	0/0:10,0:6:15.01:0,15,161	0/0:17,0:11:10.34:0,10,241	0/0:15,0:15:45.14:0,45,533	0/0:14,0:14:1.20:0,1,31	0/0:11,0:11:5.64:0,6,71	1/1:11,12:22:7.52:460,8,0	0/0:9,0:9:8.24:0,8,100	0/0:14,0:14:36.07:0,36,410	0/0:13,0:13:33.10:0,33,387	0/0:15,0:15:41.24:0,41,408	0/0:12,0:11:6.98:0,7,104	0/0:15,0:14:6.94:0,7,75	0/0:8,0:8:18.06:0,18,215	0/0:13,0:13:36.09:0,36,417	0/0:20,0:18:48.10:0,48,556	0/0:22,0:22:54.16:0,54,639	1/1:4,12:14:19.03:443,19,0	1/1:0,7:7:21.07:293,21,0	1/1:0,6:5:12.04:167,12,0	0/0:6,0:6:18.06:0,18,216	0/0:8,0:8:21.06:0,21,251	0/0:7,0:7:14.22:0,14,174	1/1:2,11:13:32.13:456,32,0	1/1:2,18:20:49.03:709,49,0	1/1:5,19:24:60.62:868,61,0	1/1:0,10:10:30.10:420,30,0
chr10	40247205	.	CA	C	5602.29	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=11.280;DP=607;FS=8.792;HRun=1;HaplotypeScore=70.3255;InbreedingCoeff=0.9985;MQ=78.79;MQ0=1;MQRankSum=-1.705;QD=35.01;ReadPosRankSum=0.974;VQSLOD=4.5719;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:63.20:0,63,979	0/0:6,0:6:18.06:0,18,288	0/0:46,0:34:60.51:0,61,1281	0/0:54,0:33:66.24:0,66,837	0/0:28,0:28:81.24:0,81,1223	0/0:26,0:26:78.23:0,78,1177	0/0:13,0:13:39.12:0,39,598	1/1:1,19:20:51.16:694,51,0	0/0:20,0:20:57.15:0,57,882	0/0:14,0:14:36.12:0,36,552	0/0:14,0:14:42.14:0,42,671	0/0:22,0:22:66.23:0,66,1054	0/0:16,0:16:48.12:0,48,721	0/0:24,0:24:72.23:0,72,1122	0/0:24,0:24:69.22:0,69,1077	0/0:17,0:17:51.15:0,51,765	0/0:12,0:12:33.11:0,33,526	0/0:17,0:17:51.05:0,51,683	1/1:0,15:15:38.98:500,39,0	1/1:0,15:15:39.04:499,39,0	1/1:0,24:24:60.20:837,60,0	0/0:25,0:25:75.24:0,75,1176	0/0:23,0:23:69.24:0,69,1098	0/0:23,0:23:69.24:0,69,1100	1/1:0,24:24:60.20:834,60,0	1/1:0,23:23:68.98:862,69,0	1/1:0,28:28:66.11:916,66,0	1/1:0,11:11:33.11:460,33,0
chr10	40247876	.	G	GA	8077.26	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-14.366;DP=591;FS=2.347;HRun=0;HaplotypeScore=55.9853;InbreedingCoeff=0.9958;MQ=85.61;MQ0=0;MQRankSum=-2.884;QD=42.51;ReadPosRankSum=-1.065;VQSLOD=4.9275;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:78.25:0,78,1073	0/0:6,0:6:18.06:0,18,251	0/0:23,0:23:63.07:0,63,837	0/0:20,0:19:57.18:0,57,765	0/0:20,0:20:60.20:0,60,828	0/0:17,0:17:51.17:0,51,712	0/0:23,0:23:69.20:0,69,931	1/1:0,34:34:99:1555,102,0	0/0:19,0:19:54.18:0,54,752	0/0:17,0:17:48.12:0,48,668	0/0:10,0:10:30.10:0,30,418	0/0:21,0:21:63.20:0,63,863	0/0:22,0:22:63.19:0,63,861	0/0:22,0:22:66.19:0,66,887	0/0:21,0:21:63.20:0,63,864	0/0:17,0:17:51.17:0,51,713	0/0:33,0:33:99:0,99,1366	0/0:27,0:27:81.27:0,81,1131	1/1:1,19:20:60.14:886,60,0	1/1:0,16:16:39.13:623,39,0	1/1:0,37:37:96.33:1534,96,0	0/0:13,0:13:39.11:0,39,512	0/0:14,0:14:42.14:0,42,584	0/0:29,0:29:84.24:0,84,1153	1/1:2,20:22:60.19:933,60,0	1/1:1,17:19:15.20:776,15,0	1/1:1,31:32:84.29:1339,84,0	1/1:0,10:10:27.09:432,27,0
chr10	40248484	.	T	TA	6115.51	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=6.030;DP=651;FS=8.635;HRun=5;HaplotypeScore=82.4517;InbreedingCoeff=0.9979;MQ=82.32;MQ0=0;MQRankSum=-11.180;QD=34.75;ReadPosRankSum=-4.555;VQSLOD=2.5371;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:33:87.18:0,87,918	0/0:8,0:8:21.05:0,21,225	0/0:19,0:19:51.01:0,51,517	0/0:22,0:22:54.10:0,54,561	0/0:26,0:26:66.16:0,66,709	0/0:35,0:35:93.22:0,93,993	0/0:25,0:26:74.22:0,74,780	1/1:10,22:32:81.25:1038,81,0	0/0:16,0:16:45.09:0,45,475	0/0:31,0:31:90.21:0,90,951	0/0:30,0:30:84.16:0,84,877	0/0:20,0:20:57.14:0,57,612	0/0:20,0:20:60.15:0,60,641	0/0:16,0:16:48.12:0,48,516	0/0:36,0:36:99:0,102,1088	0/0:18,0:18:51.13:0,51,548	0/0:24,0:24:69.17:0,69,741	0/0:12,0:12:36.09:0,36,387	1/1:2,19:21:60.19:788,60,0	1/1:4,19:23:57.17:729,57,0	1/1:0,17:17:36.12:467,36,0	0/0:27,0:27:78.20:0,78,838	0/0:30,0:30:87.21:0,87,929	0/0:25,0:25:66.14:0,66,700	1/1:1,22:23:66.21:845,66,0	1/1:3,20:23:42.60:831,43,0	1/1:1,30:31:90.29:1182,90,0	1/1:0,6:6:18.06:237,18,0
chr10	40248510	.	T	TAA	8996.87	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=5.604;DP=653;FS=2.773;HRun=0;HaplotypeScore=88.5469;InbreedingCoeff=0.9992;MQ=70.01;MQ0=1;MQRankSum=-11.067;QD=49.16;ReadPosRankSum=-2.738;VQSLOD=5.0627;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:87.30:0,87,1404	0/0:8,0:8:24.08:0,24,391	0/0:19,0:19:48.11:0,48,691	0/0:14,0:14:29.20:0,29,534	0/0:29,0:29:87.30:0,87,1404	0/0:36,0:36:99:0,108,1703	0/0:24,0:24:72.25:0,72,1165	1/1:1,28:29:84.28:1636,84,0	0/0:21,0:21:60.20:0,60,971	0/0:34,0:34:99:0,102,1632	0/0:26,0:26:75.26:0,75,1207	0/0:27,0:27:81.25:0,81,1267	0/0:18,0:18:51.17:0,51,830	0/0:14,0:14:42.12:0,42,621	0/0:33,0:33:96.33:0,96,1559	0/0:21,0:21:63.20:0,63,1004	0/0:24,0:24:69.21:0,69,1091	0/0:13,0:13:39.13:0,39,632	1/1:0,15:16:48.16:902,48,0	1/1:1,23:24:65.98:1040,66,0	1/1:2,21:23:53.68:750,54,0	0/0:25,0:25:75.24:0,75,1195	0/0:33,0:33:96.31:0,96,1542	0/0:22,0:22:60.20:0,60,972	1/1:0,21:21:63.04:1096,63,0	1/1:3,27:30:41.34:1585,41,0	1/1:2,29:31:78.22:1509,78,0	1/1:0,8:8:24.08:479,24,0
chr10	40249781	.	CGGA	C	8714.39	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=8.431;DP=702;FS=10.775;HRun=0;HaplotypeScore=129.7398;InbreedingCoeff=0.9996;MQ=71.61;MQ0=0;MQRankSum=-3.227;QD=44.69;ReadPosRankSum=4.126;VQSLOD=6.3130;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:44:99:0,126,2940	1/1:0,10:10:27.09:475,27,0	0/0:27,0:24:66.23:0,66,1501	0/0:37,0:35:99:0,105,2371	1/1:2,16:16:42.14:713,42,0	0/0:33,0:32:96.31:0,96,2140	0/0:36,0:36:99:0,99,2274	0/0:25,0:25:69.21:0,69,1467	0/0:16,0:16:45.11:0,45,1012	1/1:5,26:31:84.29:1469,84,0	1/1:2,18:20:45.11:743,45,0	0/0:22,0:22:63.22:0,63,1490	0/0:22,0:22:63.22:0,63,1468	0/0:26,0:26:75.26:0,75,1772	1/1:0,26:26:75.26:1309,75,0	1/1:0,21:21:57.20:1004,57,0	1/1:2,21:23:54.19:951,54,0	1/1:0,15:15:39.13:688,39,0	0/0:20,0:20:60.18:0,60,1369	0/0:24,0:24:51.18:0,51,1196	0/0:46,0:45:99:0,123,2744	1/1:1,30:31:81.28:1362,81,0	0/0:10,0:10:27.09:0,27,631	0/0:35,0:35:93.32:0,93,2186	0/0:16,0:16:42.14:0,42,983	0/0:27,1:28:31.43:0,31,1842	0/0:23,0:23:66.23:0,66,1560	0/0:15,0:15:45.15:0,45,1041
chr10	40249824	.	AAG	A	5175.68	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=0.195;DP=555;FS=6.718;HRun=0;HaplotypeScore=110.2587;InbreedingCoeff=0.9936;MQ=82.32;MQ0=1;MQRankSum=-3.470;QD=34.74;ReadPosRankSum=0.238;VQSLOD=6.8674;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:32:87.28:0,87,1524	0/0:8,0:8:21.07:0,21,371	0/0:31,0:29:72.23:0,72,1199	0/0:28,0:26:65.92:0,66,960	0/0:15,0:14:36.09:0,36,584	0/0:19,0:19:45.13:0,45,756	0/0:28,0:28:72.64:0,73,1195	1/1:3,13:16:39.12:528,39,0	0/0:15,0:15:33.11:0,33,588	0/0:21,0:21:57.18:0,57,958	0/0:14,0:14:42.14:0,42,723	0/0:17,0:17:48.16:0,48,832	0/0:18,0:18:48.16:0,48,856	0/0:17,0:17:48.11:0,48,822	0/0:20,0:19:54.17:0,54,937	0/0:13,0:13:36.12:0,36,643	0/0:24,0:23:42.14:0,42,749	0/0:16,0:16:35.98:0,36,545	1/1:1,15:16:45.14:610,45,0	1/1:0,18:18:45.15:626,45,0	1/1:3,28:30:75.21:1022,75,0	0/0:23,0:23:57.20:0,57,1017	0/0:9,0:9:23.91:0,24,356	0/0:37,0:37:93.28:0,93,1601	1/1:1,12:13:33.07:436,33,0	1/1:4,21:25:12.65:785,13,0	1/1:1,22:23:63.21:876,63,0	1/1:0,7:7:21.07:292,21,0
chr10	40249855	.	TACACACACACACAC	T	1912.34	PASS	AB=0.722;AC=9;AF=0.161;AN=56;BaseQRankSum=3.046;DP=469;FS=13.172;HRun=0;HaplotypeScore=183.2882;InbreedingCoeff=0.6038;MQ=68.17;MQ0=8;MQRankSum=-5.594;QD=25.50;ReadPosRankSum=1.500;VQSLOD=2.1224;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:34:20.37:0,20,1170	0/0:9,0:9:11.59:0,12,536	0/0:26,0:17:3.01:0,3,54	0/0:27,0:18:6.02:0,6,95	0/0:16,0:15:24.55:0,25,1186	1/1:8,6:14:9.03:352,9,0	0/1:16,10:25:9.75:225,0,10	0/0:16,0:13:6.64:0,7,124	1/1:5,9:15:11.16:448,11,0	0/0:14,0:15:30.10:0,30,1445	0/0:13,0:13:9.03:0,9,576	0/0:16,0:17:18.53:0,19,1085	1/1:7,6:12:15.05:587,15,0	1/1:4,3:7:12.04:450,12,0	0/0:15,0:16:20.87:0,21,1208	0/0:17,0:18:21.54:0,22,1191	0/0:26,0:26:30.46:0,30,1260	0/0:15,0:14:31.88:0,32,1347	0/0:14,0:12:15.05:0,15,838	0/0:10,0:9:3.01:0,3,172	0/0:22,0:20:15.05:0,15,720	0/0:12,0:12:6.02:0,6,364	0/0:6,0:10:4.08:0,4,362	0/0:19,0:30:17.74:0,18,719	0/0:9,0:9:6.02:0,6,343	0/0:18,0:18:27.02:0,27,1253	0/0:14,0:14:18.04:0,18,806	0/0:3,0:2:3.01:0,3,190
chr10	40250053	.	GAA	G	2549.76	PASS	AB=0.769;AC=21;AF=0.375;AN=56;BaseQRankSum=-4.363;DP=580;FS=0.000;HRun=15;HaplotypeScore=84.9186;InbreedingCoeff=0.8535;MQ=58.22;MQ0=29;MQRankSum=2.710;QD=11.97;ReadPosRankSum=6.556;VQSLOD=2.5262;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:16,16:33:33.07:478,33,0	1/1:2,5:7:14.96:132,15,0	0/0:34,0:5:3.12:0,3,90	0/0:25,0:11:10.76:0,11,100	1/1:7,7:13:22.20:174,22,0	0/0:2,0:17:30.01:0,30,286	0/0:8,0:27:27.01:0,27,271	0/0:23,0:16:31.23:0,31,322	0/0:8,0:9:17.91:0,18,155	1/1:6,12:20:26.40:267,26,0	1/1:4,8:11:11.79:105,12,0	0/0:10,0:21:23.54:0,24,122	0/0:4,0:13:17.95:0,18,153	0/0:7,0:15:11.93:0,12,92	1/1:5,7:12:11.83:105,12,0	1/1:3,10:13:32.59:275,33,0	1/1:11,34:47:82.01:701,82,0	1/1:8,13:22:25.26:289,25,0	0/0:21,1:18:17.53:0,18,401	0/0:18,0:19:29.12:0,29,264	0/0:19,0:20:35.23:0,35,369	1/1:6,14:21:22.06:222,22,0	0/1:7,1:10:14.79:15,0,26	0/0:6,0:18:7.35:0,7,36	0/0:33,0:34:52.15:0,52,521	0/0:34,0:32:37.22:0,37,536	0/0:15,0:16:8.42:0,8,277	0/0:17,0:17:35.52:0,36,388
chr10	40251410	.	ATT	A	2558.25	PASS	AB=0.613;AC=26;AF=0.464;AN=56;BaseQRankSum=-2.816;DP=479;FS=0.000;HRun=16;HaplotypeScore=78.8707;InbreedingCoeff=0.6312;MQ=63.90;MQ0=17;MQRankSum=1.040;QD=9.07;ReadPosRankSum=2.248;VQSLOD=1.4459;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,14:18:29.86:334,30,0	0/0:4,0:6:5.33:0,5,28	0/0:13,0:8:8.89:0,9,76	0/0:8,0:5:3.01:0,3,30	0/0:12,0:17:24.02:0,24,192	0/0:5,0:17:25.52:0,26,136	0/1:5,1:11:12.61:13,0,21	1/1:10,15:26:44.46:363,44,0	0/0:6,0:14:17.18:0,17,70	0/0:17,0:22:46.70:0,47,435	0/0:18,0:18:33.68:0,34,370	1/1:7,0:16:7.28:73,7,0	0/0:8,0:11:18.86:0,19,130	0/0:4,0:11:16.11:0,16,82	0/1:5,1:18:1.86:2,0,75	0/0:13,1:23:7.09:0,7,169	0/1:6,4:18:36.43:69,0,36	0/0:11,0:13:23.98:0,24,257	1/1:12,7:20:12.15:185,12,0	1/1:3,14:22:19.50:345,20,0	1/1:4,11:15:20.69:204,21,0	0/0:7,0:17:1.64:0,2,75	1/1:5,0:18:35.53:153,36,0	1/1:4,0:12:16.39:70,16,0	1/1:3,11:16:29.54:279,30,0	0/1:9,9:21:28.29:162,0,28	1/1:9,20:33:36.70:399,37,0	1/1:5,4:6:14.54:111,15,0
chr10	40255079	.	TCACACACA	T	4001.28	PASS	AB=0.758;AC=38;AF=0.731;AN=52;BaseQRankSum=5.633;DP=620;FS=18.195;HRun=0;HaplotypeScore=163.4937;InbreedingCoeff=0.4214;MQ=65.53;MQ0=29;MQRankSum=-7.211;QD=11.05;ReadPosRankSum=-1.861;VQSLOD=1.5452;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:39.11:0,39,1117	1/1:4,0:7:3.01:56,3,0	./.	./.	1/1:11,0:15:8.71:47,9,0	1/1:11,0:11:8.21:57,8,0	1/1:19,5:24:8.06:156,8,0	1/1:26,0:24:2.97:21,3,0	1/1:9,12:22:27.09:675,27,0	1/1:14,0:18:11.71:179,12,0	1/1:10,0:15:9.03:156,9,0	0/0:18,0:33:30.07:0,30,823	1/1:13,5:19:8.99:206,9,0	1/1:11,8:20:20.92:505,21,0	0/1:12,4:22:99:122,0,107	1/1:9,1:21:28.92:217,29,0	0/0:15,0:18:0.35:0,0,167	0/1:12,0:15:29.99:157,0,30	1/1:12,0:12:1.30:23,1,0	1/1:8,6:15:8.92:166,9,0	0/1:23,7:30:0.12:0,0,0	0/1:4,0:7:14.12:14,0,19	0/0:10,0:19:6.54:0,7,433	0/0:22,0:25:24.40:0,24,752	1/1:10,6:17:12.04:281,12,0	1/1:11,4:15:9:141,9,0	1/1:7,13:23:32.81:767,33,0	1/1:6,1:8:3.01:56,3,0
chr10	40255828	.	C	CA	3605.74	PASS	AB=0.925;AC=20;AF=0.370;AN=54;BaseQRankSum=5.200;DP=571;FS=1.267;HRun=8;HaplotypeScore=86.2646;InbreedingCoeff=0.8077;MQ=67.77;MQ0=8;MQRankSum=0.431;QD=18.68;ReadPosRankSum=0.516;VQSLOD=3.4236;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,138,1241	1/1:1,8:9:21.06:238,21,0	0/0:40,0:21:41.78:0,42,298	0/1:37,0:21:23:23,0,130	1/1:3,21:26:38.66:586,39,0	0/0:20,0:20:51.01:0,51,467	0/0:23,0:22:59.97:0,60,537	0/0:28,0:28:74.97:0,75,666	0/0:25,0:25:59.98:0,60,543	1/1:4,8:11:24.04:262,24,0	1/1:3,11:14:30.04:328,30,0	0/0:24,0:24:57.01:0,57,521	0/0:12,0:12:35.95:0,36,316	0/0:11,0:11:30.01:0,30,274	1/1:2,20:21:60.16:679,60,0	1/1:2,15:16:34.18:472,34,0	1/1:5,23:29:69.03:772,69,0	1/1:1,8:9:15.04:172,15,0	0/0:18,0:18:45.02:0,45,412	0/0:7,0:7:14.99:0,15,132	0/0:21,0:21:48.01:0,48,438	1/1:0,1:1:3.01:35,3,0	./.	0/0:43,0:42:99:0,102,899	0/0:20,0:20:36.42:0,36,465	0/1:14,3:17:38.80:39,0,326	0/0:19,0:19:57.03:0,57,521	0/0:16,0:16:48.03:0,48,439
chr10	40256046	.	T	TA	2164.02	PASS	AB=0.963;AC=20;AF=0.370;AN=54;BaseQRankSum=-1.599;DP=377;FS=13.179;HRun=9;HaplotypeScore=45.4556;InbreedingCoeff=0.7879;MQ=60.84;MQ0=0;MQRankSum=-0.842;QD=15.91;ReadPosRankSum=0.389;VQSLOD=2.0811;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,26:27:69.07:733,69,0	0/0:8,0:8:20.99:0,21,182	0/0:19,0:9:0.13:0,0,68	0/1:20,0:10:3.29:3,0,43	0/0:20,0:20:56.96:0,57,488	1/1:0,18:18:45.12:498,45,0	1/1:1,3:4:6.02:66,6,0	0/0:29,0:28:50.92:0,51,434	1/1:2,7:9:24.06:258,24,0	0/0:9,0:9:23.99:0,24,207	0/0:13,0:13:23.95:0,24,202	1/1:3,6:9:15.04:166,15,0	1/1:1,5:6:15.04:166,15,0	1/1:1,6:7:18.05:199,18,0	0/0:11,0:11:21.78:0,22,223	0/0:12,0:12:32.97:0,33,281	0/0:28,0:28:71.98:0,72,625	0/0:16,0:16:35.96:0,36,312	0/1:23,2:23:9.40:9,0,381	0/0:6,0:6:11.99:0,12,104	0/0:3,0:3:9:0,9,78	./.	1/1:2,4:6:12.03:133,12,0	1/1:0,5:5:12.03:133,12,0	0/0:13,0:13:38.99:0,39,339	0/0:19,0:19:56.99:0,57,495	0/0:17,0:17:41.99:0,42,364	0/0:18,0:18:53.99:0,54,469
chr10	40256264	.	T	TA	344.30	PASS	AB=0.739;AC=12;AF=0.500;AN=24;BaseQRankSum=-2.265;DP=242;FS=19.750;HRun=9;HaplotypeScore=30.6185;InbreedingCoeff=0.4264;MQ=81.83;MQ0=114;MQRankSum=-0.481;QD=3.96;ReadPosRankSum=0.645;VQSLOD=-0.3602;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	0/0:1,0:1:2.90:0,3,16	0/0:34,0:19:22.47:0,22,153	0/1:43,0:19:21.66:22,0,39	0/0:6,0:6:3:0,3,26	1/1:0,4:4:9.02:99,9,0	./.	./.	1/1:3,1:2:3.01:32,3,0	0/0:5,0:2:2.99:0,3,26	./.	./.	0/1:0,5:2:0:0,0,0	./.	./.	0/0:9,0:3:9:0,9,78	./.	./.	./.	./.	./.	./.	./.	./.	1/1:0,4:2:3.01:33,3,0	1/1:2,11:7:18.52:198,19,0	1/1:2,10:7:6.02:66,6,0	./.
chr10	40257400	.	ATT	A	675.20	PASS	AB=1.000;AC=24;AF=0.750;AN=32;BaseQRankSum=-2.564;DP=217;FS=1.530;HRun=2;HaplotypeScore=26.9877;InbreedingCoeff=0.3514;MQ=51.55;MQ0=28;MQRankSum=0.267;QD=13.24;ReadPosRankSum=-0.149;VQSLOD=0.6369;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:8,0:7:0.68:78,0,1	./.	0/0:77,0:12:31.53:0,32,318	0/0:77,0:14:16.38:0,16,172	1/1:4,0:4:3.48:12,3,0	1/1:0,1:1:1.25:3,1,0	1/1:2,0:2:2.80:13,3,0	1/1:1,7:7:21.07:275,21,0	./.	./.	1/1:1,0:1:3:25,3,0	./.	1/1:1,2:3:6.02:76,6,0	./.	./.	1/1:1,1:1:3.01:39,3,0	0/1:9,0:5:4.27:30,0,4	./.	1/1:3,3:6:14.07:156,14,0	./.	./.	0/0:0,0:1:2.22:0,2,7	./.	1/1:3,0:1:2.90:16,3,0	./.	1/1:0,1:1:3.01:38,3,0	./.	1/1:3,0:2:3:25,3,0
chr10	40257429	.	AAG	A	620.57	PASS	AB=0.955;AC=21;AF=0.457;AN=46;BaseQRankSum=-0.312;DP=271;FS=15.117;HRun=0;HaplotypeScore=37.0331;InbreedingCoeff=0.2463;MQ=20.64;MQ0=36;MQRankSum=-0.042;QD=2.76;ReadPosRankSum=-0.097;VQSLOD=-0.1600;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:12:13.17:0,13,214	0/0:1,0:1:2.50:0,2,9	0/1:53,1:5:5.67:6,0,56	0/1:73,2:5:5.45:5,0,41	0/0:7,0:5:1.38:0,1,9	0/1:5,0:4:5.45:5,0,13	0/0:4,0:4:11.57:0,12,82	0/1:27,4:28:9:287,0,9	./.	0/1:7,0:4:1.47:2,0,1	1/1:2,0:2:5.52:27,6,0	./.	0/0:4,0:4:6.02:0,6,26	0/1:3,0:3:4.68:5,0,36	./.	0/0:3,0:2:5.27:0,5,25	0/1:13,0:9:2.22:42,0,2	0/0:5,0:1:1.82:0,2,5	1/1:10,1:8:6.24:73,6,0	1/1:0,3:3:9.03:109,9,0	0/1:2,1:1:0:0,0,0	./.	./.	0/1:3,0:1:0:0,0,0	1/1:4,1:4:10.24:97,10,0	1/1:5,1:4:9.22:60,9,0	0/0:4,0:4:0.94:0,1,18	1/1:4,0:3:4.82:35,5,0
chr10	40257459	.	GAAA	G	685.27	PASS	AB=0.833;AC=12;AF=0.250;AN=48;BaseQRankSum=0.401;DP=196;FS=4.862;HRun=7;HaplotypeScore=46.1959;InbreedingCoeff=0.4539;MQ=69.91;MQ0=7;MQRankSum=-1.721;QD=15.94;ReadPosRankSum=-1.949;VQSLOD=-0.6769;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:17:45.09:0,45,821	1/1:2,0:2:2.93:25,3,0	0/0:16,0:7:12:0,12,146	0/0:33,2:8:7.68:0,8,126	1/1:2,1:3:3.01:45,3,0	0/0:9,0:9:27.09:0,27,550	0/0:3,0:3:6.02:0,6,114	0/0:22,0:20:28.11:0,28,785	0/0:2,0:2:6.02:0,6,133	1/1:2,0:2:3.01:44,3,0	1/1:1,4:5:6.02:91,6,0	0/0:3,0:2:3.01:0,3,67	0/0:3,0:3:5.97:0,6,85	0/0:5,0:5:10.11:0,10,193	./.	0/1:1,1:2:10.89:40,0,11	1/1:11,6:15:38.80:547,39,0	./.	0/1:12,0:10:35.95:36,0,287	0/0:6,0:6:18.06:0,18,377	0/0:5,0:4:11.96:0,12,175	./.	./.	0/0:2,0:1:3.01:0,3,66	0/0:9,0:8:21.07:0,21,403	0/0:4,0:4:11.93:0,12,174	0/0:3,0:3:9.03:0,9,129	0/0:2,0:2:6.02:0,6,112
chr10	40257462	.	A	AAG	507.39	PASS	AB=1.000;AC=13;AF=0.260;AN=50;BaseQRankSum=0.134;DP=194;FS=2.035;HRun=0;HaplotypeScore=43.1790;InbreedingCoeff=0.5449;MQ=71.11;MQ0=6;MQRankSum=-1.511;QD=11.80;ReadPosRankSum=-3.151;VQSLOD=2.5694;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:45.10:0,45,643	1/1:2,0:2:5.98:47,6,0	0/0:15,0:7:12:0,12,145	0/0:29,0:8:6.73:0,7,117	1/1:2,0:2:3.01:46,3,0	0/0:9,0:9:27.09:0,27,396	0/0:4,0:4:8.94:0,9,79	0/0:25,0:23:19.38:0,19,530	0/0:2,0:2:6.02:0,6,85	1/1:2,0:2:0.47:1,0,0	1/1:5,0:5:6.02:91,6,0	0/0:3,0:2:3:0,3,28	0/0:3,0:3:5.98:0,6,62	0/0:6,0:6:13.01:0,13,175	./.	1/1:3,0:3:8.19:44,8,0	1/1:14,3:15:18.57:387,19,0	./.	0/1:12,0:10:36.04:36,0,155	0/0:6,0:6:17.87:0,18,182	0/0:5,0:4:12.04:0,12,178	./.	0/0:1,0:1:3:0,3,25	0/0:2,0:1:3.01:0,3,44	0/0:9,0:8:20.85:0,21,247	0/0:4,0:4:11.94:0,12,134	0/0:3,0:3:8.96:0,9,110	0/0:2,0:2:5.94:0,6,41
chr10	40257560	.	CT	C	2544.49	PASS	AC=48;AF=0.889;AN=54;BaseQRankSum=2.000;DP=239;FS=13.248;HRun=12;HaplotypeScore=27.4176;InbreedingCoeff=0.4699;MQ=70.65;MQ0=2;MQRankSum=-2.611;QD=12.72;ReadPosRankSum=2.406;VQSLOD=1.6382;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,1:26:36.82:0,37,526	1/1:2,2:4:2.98:23,3,0	0/0:7,0:7:11.84:0,12,89	0/0:4,0:3:0:0,0,0	1/1:4,4:8:11.84:85,12,0	1/1:2,11:13:29.87:232,30,0	1/1:1,3:3:5.96:46,6,0	1/1:14,21:34:36.99:420,37,0	1/1:2,2:4:5.97:46,6,0	1/1:0,2:2:2.97:23,3,0	1/1:5,2:7:3.74:52,4,0	1/1:0,0:4:6.11:18,6,0	1/1:1,4:5:5.97:46,6,0	1/1:1,4:5:11.91:88,12,0	1/1:3,3:5:8.96:70,9,0	1/1:1,2:3:8.93:65,9,0	1/1:5,18:24:55.79:419,56,0	1/1:4,14:18:26.88:209,27,0	1/1:8,9:16:26.83:205,27,0	./.	1/1:3,4:7:5.97:46,6,0	1/1:0,1:1:2.99:23,3,0	1/1:1,0:4:5.89:17,6,0	1/1:0,0:3:2.04:6,2,0	1/1:0,3:3:8.97:70,9,0	1/1:1,7:8:20.81:154,21,0	1/1:1,3:4:5.98:46,6,0	1/1:0,11:11:32.87:255,33,0
chr10	40259606	.	AAAAGAAAG	A	1228.37	PASS	AB=0.661;AC=8;AF=0.154;AN=52;BaseQRankSum=2.519;DP=506;FS=4.338;HRun=0;HaplotypeScore=155.6162;InbreedingCoeff=0.5895;MQ=55.64;MQ0=10;MQRankSum=-3.868;QD=12.93;ReadPosRankSum=-0.482;VQSLOD=2.2602;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:18:22.79:0,23,199	1/1:3,4:7:8.92:223,9,0	./.	./.	0/0:20,0:19:30.10:0,30,1076	0/0:5,0:11:11.97:0,12,97	0/1:7,1:17:53.43:53,0,150	0/0:34,0:30:39.13:0,39,1059	0/0:12,0:23:32.92:0,33,284	1/1:15,8:23:7.75:221,8,0	1/1:14,16:30:38.61:803,39,0	0/0:16,0:16:18.06:0,18,681	0/0:18,0:18:42.14:0,42,1634	0/0:10,0:10:18.06:0,18,658	0/0:16,0:16:24.08:0,24,947	0/0:16,0:16:27.09:0,27,1062	0/0:24,0:24:42.14:0,42,1606	0/1:10,8:17:13.30:68,0,13	0/0:18,0:17:6.02:0,6,240	0/0:12,0:28:42.14:0,42,1263	0/0:7,0:7:7.27:0,7,197	0/0:10,0:10:17.98:0,18,629	0/0:19,0:19:39.13:0,39,1425	0/0:21,0:21:5.64:0,6,1048	0/0:8,0:24:36.12:0,36,1252	0/0:19,0:24:39.13:0,39,1176	0/0:9,0:19:23.85:0,24,668	0/0:5,0:13:21.07:0,21,685
chr10	40259816	.	AGTCT	A	9127.94	PASS	AC=34;AF=0.630;AN=54;BaseQRankSum=13.962;DP=696;FS=3.576;HRun=0;HaplotypeScore=131.0676;InbreedingCoeff=0.9357;MQ=62.57;MQ0=4;MQRankSum=0.909;QD=22.65;ReadPosRankSum=8.172;VQSLOD=4.0132;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:78.25:0,78,1793	1/1:6,0:6:3.01:48,3,0	0/0:30,0:15:11.69:0,12,221	0/0:37,0:22:12.71:0,13,193	1/1:5,12:17:18.22:290,18,0	1/1:6,14:20:27.09:436,27,0	1/1:17,19:36:42.14:678,42,0	0/0:24,0:24:45.15:0,45,992	1/1:7,15:22:24.08:387,24,0	1/1:8,15:22:48.09:717,48,0	1/1:6,11:17:12.04:192,12,0	1/1:7,16:23:27.09:436,27,0	1/1:6,23:29:51.17:823,51,0	1/1:7,19:26:36.59:582,37,0	1/1:9,24:33:54.18:869,54,0	1/1:8,11:19:30.10:483,30,0	1/1:11,27:38:69.24:1111,69,0	1/1:5,14:19:30.10:478,30,0	0/0:19,0:19:27.09:0,27,558	0/0:10,0:10:15.05:0,15,306	0/0:69,1:70:47.58:0,48,3017	1/1:6,10:16:18.06:288,18,0	1/1:6,11:16:5.83:97,6,0	1/1:6,36:42:75.26:1211,75,0	0/0:22,1:22:30.10:0,30,668	0/0:30,0:29:65.56:0,66,1393	0/0:12,0:12:15.05:0,15,360	./.
chr10	40261351	.	AAAAAAG	A	3691.06	PASS	AB=1.000;AC=41;AF=0.732;AN=56;BaseQRankSum=-4.827;DP=490;FS=4.271;HRun=0;HaplotypeScore=101.9950;InbreedingCoeff=0.1368;MQ=47.88;MQ0=14;MQRankSum=1.311;QD=8.17;ReadPosRankSum=-1.634;VQSLOD=1.9801;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:31:56.69:57,0,127	1/1:7,0:7:15:131,15,0	0/1:21,0:5:0.15:0,0,102	0/0:16,0:6:11.85:0,12,101	1/1:23,0:22:7.33:90,7,0	1/1:10,8:18:9:139,9,0	1/1:20,6:25:46.88:638,47,0	0/1:26,0:25:99:118,0,110	1/1:14,0:14:23.60:222,24,0	1/1:16,0:16:23.80:227,24,0	1/1:7,4:11:6.04:143,6,0	1/1:17,1:18:2.88:154,3,0	1/1:17,1:18:31.53:371,32,0	1/1:15,0:15:26.74:211,27,0	1/1:15,0:15:9.35:81,9,0	0/1:5,0:5:0.91:44,0,1	1/1:21,0:19:30.08:244,30,0	1/1:21,0:21:7.93:45,8,0	0/1:20,0:19:65.33:110,0,65	0/1:16,0:16:25.96:63,0,26	0/0:16,0:15:3.88:0,4,28	1/1:9,0:8:16.09:137,16,0	1/1:19,0:19:20.74:211,21,0	1/1:18,0:18:11.54:83,12,0	0/1:18,0:17:10.04:87,0,10	0/1:18,0:18:62.73:63,0,69	0/0:6,0:5:5.88:0,6,46	0/1:26,0:24:22.56:23,0,100
chr10	40261352	.	AAAAAG	A	4751.69	PASS	AB=0.984;AC=43;AF=0.768;AN=56;BaseQRankSum=-4.503;DP=491;FS=0.607;HRun=0;HaplotypeScore=90.7636;InbreedingCoeff=0.0025;MQ=48.08;MQ0=13;MQRankSum=2.279;QD=10.00;ReadPosRankSum=-1.589;VQSLOD=3.3297;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:34,0:32:12.49:169,0,12	1/1:6,1:7:15.01:154,15,0	0/1:21,0:5:0.06:0,0,82	0/0:16,0:6:14.77:0,15,113	1/1:22,1:22:14.81:152,15,0	1/1:17,1:18:7.55:129,8,0	1/1:25,1:25:48.97:555,49,0	0/1:25,1:25:33.36:178,0,33	1/1:14,0:14:16.41:188,16,0	1/1:15,1:16:12.92:284,13,0	1/1:9,2:11:16.93:145,17,0	1/1:19,0:19:4.80:171,5,0	1/1:17,0:17:14.40:283,14,0	1/1:15,0:15:22.12:204,22,0	1/1:14,1:15:23.20:280,23,0	1/1:5,0:5:10.82:77,11,0	1/1:19,2:19:28.70:374,29,0	0/1:20,1:21:3.81:85,0,4	0/1:20,0:19:14.77:174,0,15	1/1:15,1:16:11.40:129,11,0	0/1:15,1:15:5.58:10,0,6	1/1:8,2:9:21.02:214,21,0	0/1:19,0:19:2.13:198,0,2	0/1:17,0:17:7.35:66,0,7	1/1:18,1:18:30.36:228,30,0	0/1:18,0:18:9.83:142,0,10	0/1:6,0:5:17.53:26,0,18	0/1:24,1:24:27.47:135,0,27
chr10	40261353	.	AAAAG	A	5257.51	PASS	AB=0.892;AC=50;AF=0.893;AN=56;BaseQRankSum=-3.575;DP=489;FS=1.748;HRun=0;HaplotypeScore=81.7886;InbreedingCoeff=0.3213;MQ=49.52;MQ0=13;MQRankSum=1.872;QD=11.14;ReadPosRankSum=0.354;VQSLOD=4.1235;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:32,2:32:55.81:394,56,0	1/1:7,0:7:15.01:140,15,0	0/1:21,0:5:1.08:1,0,79	0/0:17,0:7:17.63:0,18,116	1/1:21,1:21:22.44:156,22,0	1/1:18,0:18:11.90:121,12,0	1/1:26,0:25:48.98:490,49,0	1/1:25,1:25:29.51:259,30,0	1/1:14,0:14:17.91:201,18,0	1/1:16,0:16:7.73:244,8,0	1/1:11,0:11:17.90:154,18,0	1/1:19,0:19:11.93:187,12,0	1/1:17,0:17:17.61:251,18,0	1/1:15,0:15:24.24:208,24,0	1/1:15,0:15:14.44:214,14,0	1/1:5,0:5:12.42:99,12,0	1/1:21,0:19:24.51:301,25,0	0/1:5,16:21:7.94:113,0,8	1/1:18,1:18:17.36:247,17,0	1/1:16,0:16:24.92:172,25,0	1/1:16,0:15:4.15:19,4,0	1/1:10,0:9:21.01:195,21,0	0/1:19,0:19:12.06:175,0,12	0/1:17,0:17:8.77:89,0,9	1/1:18,0:17:36.67:291,37,0	1/1:17,1:18:31.34:240,31,0	1/1:6,0:5:7.43:40,7,0	1/1:23,2:24:28.95:253,29,0
chr10	40261354	.	AAAG	A	5821.75	PASS	AB=1.000;AC=52;AF=0.929;AN=56;BaseQRankSum=-3.213;DP=482;FS=15.430;HRun=0;HaplotypeScore=72.5194;InbreedingCoeff=0.4820;MQ=51.30;MQ0=12;MQRankSum=2.039;QD=12.52;ReadPosRankSum=1.029;VQSLOD=3.2542;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:27,7:32:65.92:500,66,0	1/1:6,0:6:15:133,15,0	0/1:22,0:6:1.06:1,0,71	0/0:17,0:7:17.22:0,17,103	1/1:21,0:20:25.62:177,26,0	1/1:15,0:15:11.89:102,12,0	1/1:25,0:24:53.86:461,54,0	1/1:22,4:25:46.49:436,46,0	1/1:14,0:14:24.73:214,25,0	1/1:16,0:16:9.36:223,9,0	1/1:10,0:10:17.88:141,18,0	1/1:19,0:19:16.14:194,16,0	1/1:16,0:16:20.47:239,20,0	1/1:15,0:15:34.64:243,35,0	1/1:15,0:15:13.06:193,13,0	1/1:5,0:5:14.62:109,15,0	1/1:21,0:19:38.03:299,38,0	1/1:20,0:20:2.87:82,3,0	1/1:21,0:20:32.16:353,32,0	1/1:2,14:16:25.96:236,26,0	1/1:16,1:16:6.28:33,6,0	1/1:10,0:9:20.85:176,21,0	0/1:18,0:18:3.82:158,0,4	1/1:17,0:17:3.58:101,4,0	1/1:17,1:17:37.51:287,38,0	1/1:18,1:19:46.06:312,46,0	1/1:6,0:5:13.77:76,14,0	1/1:21,2:23:43.27:339,43,0
chr10	40261355	.	AAG	A	5866.82	PASS	AB=1.000;AC=52;AF=0.929;AN=56;BaseQRankSum=-3.783;DP=474;FS=25.140;HRun=0;HaplotypeScore=65.4531;InbreedingCoeff=0.5309;MQ=51.81;MQ0=11;MQRankSum=0.969;QD=12.84;ReadPosRankSum=1.059;VQSLOD=2.5085;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:33,1:32:68.67:504,69,0	1/1:6,0:6:14.99:127,15,0	0/1:22,0:6:0.74:1,0,58	0/0:17,0:7:17.31:0,17,117	1/1:21,0:20:26.26:179,26,0	1/1:15,0:15:11.84:82,12,0	1/1:23,0:22:53.62:401,54,0	1/1:28,0:27:53.46:455,53,0	1/1:14,0:14:34.92:238,35,0	1/1:17,0:17:14.91:256,15,0	1/1:10,0:10:17.84:128,18,0	1/1:17,1:18:28.19:202,28,0	1/1:15,1:16:30.92:247,31,0	1/1:15,0:15:36.07:253,36,0	1/1:15,0:15:21.37:221,21,0	1/1:5,0:5:14.79:112,15,0	1/1:21,0:19:45.58:311,46,0	1/1:20,0:20:3.06:63,3,0	1/1:20,0:19:46.30:396,46,0	1/1:16,0:16:25.90:187,26,0	1/1:3,13:16:6.38:53,6,0	1/1:10,0:9:20.79:168,21,0	0/1:17,0:17:0.53:174,0,1	1/1:14,1:15:3.60:101,4,0	1/1:18,0:17:38.92:289,39,0	1/1:18,0:18:47.17:324,47,0	1/1:6,0:5:14.09:92,14,0	1/1:21,0:21:42.21:302,42,0
chr10	40261356	.	AG	A	5782.91	PASS	AB=0.972;AC=52;AF=0.929;AN=56;BaseQRankSum=-3.519;DP=454;FS=20.420;HRun=1;HaplotypeScore=57.1215;InbreedingCoeff=0.5432;MQ=52.80;MQ0=11;MQRankSum=-0.013;QD=13.23;ReadPosRankSum=1.870;VQSLOD=2.2937;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:32,1:31:70.56:494,71,0	1/1:6,0:6:14.94:122,15,0	0/1:22,0:6:0.09:0,0,40	0/0:17,0:7:17.32:0,17,114	1/1:20,0:19:29.23:200,29,0	1/1:12,2:14:11.56:63,12,0	1/1:18,1:18:52.79:351,53,0	1/1:27,1:27:64.31:457,64,0	1/1:13,0:13:35.13:248,35,0	1/1:15,1:16:14.85:250,15,0	1/1:9,0:9:17.63:114,18,0	1/1:17,2:19:33.19:233,33,0	1/1:15,1:16:36.85:242,37,0	1/1:13,0:13:36.66:257,37,0	1/1:14,0:14:23.55:231,24,0	1/1:5,0:5:14.85:114,15,0	1/1:19,1:18:44.39:305,44,0	1/1:19,0:19:3:43,3,0	1/1:20,0:19:54.71:399,55,0	1/1:16,0:16:26.33:167,26,0	1/1:15,0:15:6.36:40,6,0	1/1:10,0:9:20.91:176,21,0	0/1:16,1:17:0.60:174,0,1	1/1:14,1:15:3.78:102,4,0	1/1:15,2:16:39.06:288,39,0	1/1:15,2:17:47.16:327,47,0	1/1:6,0:5:14.87:119,15,0	1/1:18,0:18:41.27:269,41,0
chr10	40261358	.	AAAAAG	A	279.32	PASS	AB=0.990;AC=13;AF=0.232;AN=56;BaseQRankSum=7.620;DP=444;FS=35.437;HRun=0;HaplotypeScore=98.6845;InbreedingCoeff=-0.1547;MQ=58.00;MQ0=7;MQRankSum=-6.566;QD=1.55;ReadPosRankSum=7.884;VQSLOD=-0.6683;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:30:45.92:0,46,459	0/1:7,0:7:3.85:4,0,58	0/0:21,0:8:12.95:0,13,230	0/0:17,0:8:21.06:0,21,334	0/0:17,0:16:1.03:0,1,40	1/1:13,1:14:6.43:46,6,0	0/1:20,0:19:63.67:145,0,64	0/0:28,0:27:29.47:0,29,367	0/0:14,0:14:6.81:0,7,96	0/1:15,0:15:31.80:32,0,79	0/1:8,0:8:22.90:23,0,80	0/1:15,2:17:36.54:37,0,47	0/1:16,0:16:48.75:60,0,49	0/0:14,0:14:25.95:0,26,126	0/0:13,0:13:3.68:0,4,117	0/0:6,0:6:14.59:0,15,132	0/1:21,0:19:28.96:29,0,131	0/1:19,0:19:5.26:5,0,22	0/0:17,0:17:34.24:0,34,265	0/0:16,0:16:10.99:0,11,196	0/0:16,0:16:6.91:0,7,95	0/1:9,0:8:9.04:9,0,87	0/1:17,0:17:30:30,0,66	0/0:13,1:14:14.05:0,14,79	0/0:17,0:16:11.67:0,12,187	0/1:17,0:17:4.87:5,0,261	0/0:5,0:4:8.59:0,9,88	0/0:16,0:16:18.08:0,18,266
chr10	40262034	.	A	AAAC	16679.50	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=-14.794;DP=661;FS=1.800;HRun=0;HaplotypeScore=84.9103;InbreedingCoeff=0.9787;MQ=77.55;MQ0=0;MQRankSum=-4.358;QD=43.44;ReadPosRankSum=1.997;VQSLOD=6.5010;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,117,1761	0/0:16,0:16:42.14:0,42,650	0/0:21,0:21:39.04:0,39,525	0/0:11,0:11:5.81:0,6,280	0/0:23,0:23:66.20:0,66,970	1/1:3,33:36:99:2114,99,0	1/1:2,25:29:63.01:1166,63,0	1/1:6,22:28:66.20:1297,66,0	1/1:4,19:23:45.09:909,45,0	0/0:29,0:29:75.24:0,75,1138	0/0:20,0:20:51.17:0,51,786	1/1:3,24:28:63.15:1306,63,0	1/1:4,23:28:54.05:1067,54,0	1/1:5,18:24:51.02:962,51,0	0/0:34,0:34:90.29:0,90,1366	0/0:25,0:25:69.22:0,69,1045	0/0:17,0:17:45.15:0,45,690	0/0:18,0:17:51.14:0,51,764	1/1:5,7:13:24.07:477,24,0	1/1:6,20:27:60.07:1131,60,0	1/1:2,13:15:26.89:440,27,0	0/0:21,0:21:57.17:0,57,837	1/1:2,16:20:41.58:732,42,0	1/1:4,24:28:60.21:1278,60,0	1/1:1,17:19:45.02:873,45,0	1/1:7,18:25:10.76:1056,11,0	1/1:9,19:29:54.12:1107,54,0	1/1:1,11:12:36.12:766,36,0
chr10	40263019	.	A	AC	1667.08	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=8.327;DP=637;FS=9.213;HRun=8;HaplotypeScore=89.2015;InbreedingCoeff=0.9804;MQ=72.48;MQ0=0;MQRankSum=-4.256;QD=12.82;ReadPosRankSum=-0.413;VQSLOD=2.5323;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:47:79.98:0,80,710	0/0:14,0:14:41.98:0,42,373	0/0:22,0:21:40.55:0,41,343	0/0:21,0:19:38.72:0,39,324	0/0:33,0:33:81.01:0,81,737	1/1:5,2:15:8.52:43,9,0	1/1:10,0:21:17.13:89,17,0	0/0:26,0:26:53.98:0,54,484	1/1:2,0:9:14.32:76,14,0	0/0:25,0:25:66.02:0,66,604	0/0:20,0:20:41.98:0,42,378	1/1:7,15:23:53.97:580,54,0	1/1:2,1:11:16.91:91,17,0	1/1:8,0:16:17.14:95,17,0	0/0:24,0:24:69.01:0,69,625	0/0:26,0:26:72:0,72,649	0/0:43,0:43:99:0,114,1030	0/0:19,0:19:45.01:0,45,412	0/0:21,0:21:41.99:0,42,378	0/0:18,0:18:45:0,45,407	0/0:40,0:40:92.99:0,93,842	0/0:22,0:22:53.93:0,54,478	1/1:8,9:17:36.05:391,36,0	1/1:6,12:18:45.11:507,45,0	0/0:14,0:14:23.99:0,24,220	0/0:30,0:30:81.04:0,81,739	0/0:25,0:25:72.02:0,72,652	0/0:17,0:17:39.01:0,39,357
chr10	40263042	.	C	CCAA	3212.85	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=0.077;DP=684;FS=4.873;HRun=0;HaplotypeScore=108.5443;InbreedingCoeff=0.9975;MQ=69.81;MQ0=1;MQRankSum=-7.542;QD=41.19;ReadPosRankSum=-0.112;VQSLOD=4.4759;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:87.27:0,87,1238	0/0:9,0:9:21.07:0,21,299	0/0:32,0:30:45.48:0,45,616	0/0:28,0:26:36.03:0,36,579	0/0:34,0:34:84.26:0,84,1189	0/0:18,0:18:36.12:0,36,520	0/0:20,0:20:45.15:0,45,650	0/0:33,0:33:78.25:0,78,1104	0/0:14,0:14:33.11:0,33,477	0/0:21,0:21:51.17:0,51,736	0/0:20,0:20:54.18:0,54,780	1/1:7,29:36:78.27:1594,78,0	0/0:14,0:14:26.71:0,27,379	0/0:15,0:15:30.10:0,30,431	0/0:27,0:27:69.21:0,69,978	0/0:25,0:25:57.19:0,57,824	0/0:46,0:46:99:0,126,1770	0/0:25,0:25:54.10:0,54,726	0/0:17,0:17:33.11:0,33,477	0/0:16,0:16:39.13:0,39,564	0/0:54,0:54:99:0,135,1928	0/0:19,0:19:51.17:0,51,732	1/1:6,12:18:42.10:783,42,0	1/1:8,16:24:48.16:979,48,0	0/0:13,0:13:30.10:0,30,434	0/0:24,0:24:57.18:0,57,805	0/0:25,0:25:66.22:0,66,946	0/0:14,0:14:42.14:0,42,607
chr10	40264065	.	C	CAAA	4312.26	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=7.978;DP=604;FS=8.924;HRun=11;HaplotypeScore=124.9590;InbreedingCoeff=0.8925;MQ=58.02;MQ0=1;MQRankSum=-5.318;QD=23.56;ReadPosRankSum=-6.943;VQSLOD=0.9444;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:33:57.78:0,58,680	0/0:6,0:7:17.96:0,18,193	0/1:13,0:11:6.30:6,0,125	0/0:18,0:16:20.57:0,21,225	0/0:24,0:27:54.96:0,55,605	0/0:17,0:19:43.53:0,44,494	0/0:15,0:17:14.83:0,15,346	1/1:13,10:28:52.98:768,53,0	0/0:20,0:20:51.06:0,51,565	0/0:30,0:30:63.04:0,63,731	0/0:14,0:14:32.97:0,33,385	0/0:29,0:30:50.75:0,51,579	0/0:3,0:17:38.20:0,38,232	0/0:5,0:16:32.02:0,32,189	0/0:15,0:16:29.82:0,30,331	0/0:24,0:24:53.99:0,54,631	0/0:39,0:40:95.97:0,96,1092	0/0:29,0:29:74.99:0,75,845	1/1:17,9:26:48.11:752,48,0	1/1:5,7:18:42.02:606,42,0	1/1:5,4:10:3.01:56,3,0	0/0:11,0:11:27.03:0,27,315	0/0:22,0:23:66.07:0,66,718	0/0:27,0:29:60.01:0,60,672	1/1:3,10:20:45.04:622,45,0	1/1:14,14:32:66.16:1002,66,0	1/1:5,15:24:18:235,18,0	1/1:5,5:10:15.05:264,15,0
chr10	40264101	.	GA	G	2954.24	PASS	AB=0.964;AC=17;AF=0.304;AN=56;BaseQRankSum=6.403;DP=564;FS=7.853;HRun=10;HaplotypeScore=74.2052;InbreedingCoeff=0.9050;MQ=71.80;MQ0=0;MQRankSum=-1.202;QD=16.14;ReadPosRankSum=3.725;VQSLOD=3.9884;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,1:24:51.12:0,51,555	0/0:7,0:7:15.03:0,15,159	0/1:25,1:23:11.60:12,0,270	0/0:13,0:12:18.04:0,18,196	0/0:21,0:21:48.11:0,48,515	1/1:1,14:15:41.99:364,42,0	1/1:5,20:25:47.98:417,48,0	0/0:37,1:38:70.11:0,70,962	1/1:2,11:13:29.99:260,30,0	0/0:22,1:23:28.08:0,28,526	0/0:17,0:17:45.11:0,45,490	1/1:2,22:24:53.99:469,54,0	1/1:0,14:14:35.99:312,36,0	1/1:1,14:15:32.99:286,33,0	0/0:18,0:18:48.13:0,48,531	0/0:17,1:18:19.05:0,19,415	0/0:39,0:39:87.09:0,87,953	0/0:30,0:29:75.16:0,75,808	0/0:17,1:18:13.05:0,13,372	0/0:16,0:16:11.44:0,11,301	0/0:10,0:10:18.05:0,18,199	0/0:16,0:16:42.11:0,42,464	1/1:1,19:20:53.99:469,54,0	1/1:3,27:30:65.98:573,66,0	0/0:22,0:22:54.15:0,54,597	0/0:23,1:24:37.11:0,37,629	0/0:15,0:16:27.57:0,28,301	0/0:11,0:11:30.03:0,30,310
chr10	40264236	.	A	ACG	3677.25	PASS	AB=0.849;AC=39;AF=0.722;AN=54;BaseQRankSum=-2.122;DP=520;FS=0.000;HRun=0;HaplotypeScore=114.0083;InbreedingCoeff=0.1824;MQ=52.92;MQ0=9;MQRankSum=1.254;QD=7.93;ReadPosRankSum=5.652;VQSLOD=2.6724;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:25:16.15:0,16,144	1/1:12,0:10:17.98:183,18,0	0/0:4,0:3:5.94:0,6,43	0/0:12,0:4:2.44:0,2,36	0/1:14,0:15:21.05:102,0,21	1/1:23,0:23:19.89:133,20,0	1/1:11,0:24:7.95:43,8,0	1/1:19,0:18:27.45:230,27,0	1/1:14,0:14:17:93,17,0	0/1:25,0:25:9.38:276,0,9	1/1:19,0:19:16.65:115,17,0	1/1:21,0:24:33.86:251,34,0	0/1:10,0:10:0.91:62,0,1	1/1:14,0:14:16.50:148,16,0	1/1:0,2:11:2.56:27,3,0	0/1:19,0:19:0:0,0,0	0/1:19,0:22:2.50:105,0,2	1/1:28,0:27:45.34:342,45,0	1/1:7,15:22:46.15:341,46,0	0/1:14,1:15:12.58:139,0,13	0/1:15,31:42:10.62:247,0,11	./.	1/1:13,0:13:4.75:25,5,0	1/1:26,0:25:26.83:223,27,0	0/1:3,12:15:9.38:51,0,9	1/1:2,15:18:35.46:337,35,0	1/1:5,12:17:3.36:115,3,0	0/1:6,6:10:0.35:89,0,0
chr10	40264238	.	G	GCGCGCA	4433.63	PASS	AB=0.890;AC=30;AF=0.536;AN=56;BaseQRankSum=-5.190;DP=517;FS=5.308;HRun=0;HaplotypeScore=135.3617;InbreedingCoeff=0.3307;MQ=51.07;MQ0=11;MQRankSum=0.628;QD=12.38;ReadPosRankSum=1.509;VQSLOD=3.7058;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:25:10.21:0,10,235	1/1:11,0:9:18.06:319,18,0	0/0:3,0:2:6.01:0,6,61	0/0:12,0:4:9.37:0,9,91	1/1:14,0:14:15.01:208,15,0	1/1:12,0:20:2.59:206,3,0	1/1:14,0:19:5.05:38,5,0	0/1:23,0:22:26.58:27,0,45	0/1:6,0:14:25.17:119,0,25	1/1:26,0:26:53.12:702,53,0	1/1:19,0:19:8.64:228,9,0	1/1:24,0:24:32.85:472,33,0	0/1:7,0:9:20.14:97,0,20	1/1:11,0:13:11.42:249,11,0	1/1:12,0:12:2.57:48,3,0	0/0:2,14:18:0:0,0,1	0/1:7,14:24:20.11:268,0,20	1/1:30,0:29:71.46:912,71,0	0/1:25,0:23:6.64:7,0,44	0/0:16,0:16:21.39:0,21,180	0/0:45,0:41:7.28:0,7,190	0/1:2,12:17:0:0,0,0	0/1:13,0:13:1.47:34,0,1	1/1:27,0:26:26.09:445,26,0	0/0:14,0:15:10.85:0,11,139	0/1:18,0:18:39.64:56,0,40	0/0:13,0:13:5.23:0,5,46	0/0:9,0:7:7.70:0,8,64
chr10	40264279	.	C	CAG	1147.47	PASS	AB=0.545;AC=15;AF=0.268;AN=56;BaseQRankSum=5.957;DP=604;FS=1.005;HRun=0;HaplotypeScore=119.3330;InbreedingCoeff=0.8543;MQ=65.82;MQ0=14;MQRankSum=-1.099;QD=7.91;ReadPosRankSum=0.108;VQSLOD=3.3253;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:39.70:0,40,305	0/0:9,0:7:5.91:0,6,39	0/0:38,0:21:41.22:0,41,466	0/0:41,0:20:44.10:0,44,455	0/0:15,0:15:20.96:0,21,181	1/1:19,0:19:31.81:225,32,0	1/1:20,0:20:30.32:255,30,0	0/0:32,0:32:79.85:0,80,713	1/1:21,0:21:42.39:283,42,0	0/0:32,0:32:24.69:0,25,338	0/0:16,0:16:5.97:0,6,49	1/1:5,1:28:11.39:138,11,0	1/1:16,0:16:5.18:107,5,0	1/1:11,0:11:13.59:143,14,0	0/0:18,0:17:33.34:0,33,258	0/0:16,0:16:26.73:0,27,219	0/0:27,0:26:32.22:0,32,288	0/0:24,0:23:15.84:0,16,206	0/0:17,0:15:30:0,30,266	0/0:14,0:13:28.58:0,29,299	0/0:51,0:47:45.29:0,45,619	0/0:7,0:7:5.97:0,6,46	1/1:9,3:12:20.01:182,20,0	0/1:3,13:17:0:0,0,0	0/0:15,0:15:26.57:0,27,279	0/0:29,0:29:47.58:0,48,541	0/0:16,0:16:5.06:0,5,208	0/0:11,0:10:12.39:0,12,129
chr10	40265215	.	GA	G	4713.70	PASS	AB=0.609;AC=33;AF=0.589;AN=56;BaseQRankSum=0.083;DP=508;FS=3.956;HRun=12;HaplotypeScore=65.2781;InbreedingCoeff=0.8748;MQ=65.46;MQ0=6;MQRankSum=-2.426;QD=15.71;ReadPosRankSum=1.102;VQSLOD=6.0083;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:40:91.93:0,92,914	1/1:2,5:7:13.99:99,14,0	0/0:8,0:7:5.88:0,6,93	0/0:15,0:13:19.07:0,19,241	1/1:2,10:14:34.90:260,35,0	0/0:2,0:13:28.71:0,29,165	0/0:5,1:16:2.79:0,3,113	1/1:11,19:30:14.89:370,15,0	0/0:6,0:21:37.29:0,37,213	1/1:1,17:17:47.80:371,48,0	1/1:4,16:21:51.89:383,52,0	0/0:21,0:20:47.99:0,48,459	0/0:7,0:20:25.73:0,26,144	0/0:6,0:12:27.05:0,27,169	1/1:0,10:10:23.87:186,24,0	1/1:2,12:14:29.88:232,30,0	1/1:4,21:24:50.80:395,51,0	1/1:5,18:25:21.62:330,22,0	1/1:1,19:21:57.65:429,58,0	0/1:5,9:14:38.86:89,0,39	1/1:2,10:14:30.96:221,31,0	1/1:0,9:11:27.97:198,28,0	0/0:18,1:19:27.93:0,28,458	0/0:19,0:22:52.87:0,53,540	1/1:3,12:15:34.69:260,35,0	1/1:6,25:33:48.08:537,48,0	1/1:3,11:15:31.91:237,32,0	1/1:3,7:10:14.94:116,15,0
chr10	40266885	.	TTATATTCTA	T	12975.20	PASS	AB=0.669;AC=6;AF=0.107;AN=56;BaseQRankSum=18.898;DP=836;FS=4.911;HRun=0;HaplotypeScore=239.9115;InbreedingCoeff=-0.1200;MQ=76.15;MQ0=0;MQRankSum=-16.944;QD=37.07;ReadPosRankSum=0.860;VQSLOD=3.8424;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,120,5400	0/0:13,0:13:39.13:0,39,1862	0/0:23,0:23:60.16:0,60,2585	0/0:17,0:17:48.16:0,48,1944	0/0:20,0:20:60.21:0,60,2745	0/0:15,0:15:45.14:0,45,2067	0/0:16,0:16:48.15:0,48,2098	0/1:36,21:57:99:1716,0,3747	0/0:28,0:28:84.29:0,84,3943	0/0:24,0:24:69.24:0,69,3265	0/0:23,0:23:63.22:0,63,2915	0/0:28,0:28:81.28:0,81,3783	0/0:25,0:25:75.26:0,75,3588	0/0:17,0:17:48.16:0,48,2316	0/0:26,0:26:78.27:0,78,3707	0/0:28,0:28:78.27:0,78,3447	0/0:27,0:27:78.23:0,78,3549	0/0:20,0:20:57.20:0,57,2586	0/1:38,31:68:99:2371,0,3415	0/0:18,0:18:45.15:0,45,1945	0/1:33,22:55:99:1251,0,3705	0/0:17,0:17:51.18:0,51,2310	0/0:24,0:24:69.22:0,69,3200	0/0:20,0:20:57.19:0,57,2575	0/0:16,0:16:48.14:0,48,2178	0/1:29,34:63:99:2666,0,2976	0/1:28,50:78:99:3846,0,2767	0/1:11,17:28:99:1125,0,1269
chr10	40267274	.	C	CT	4278.93	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-12.425;DP=500;FS=1.705;HRun=10;HaplotypeScore=50.0744;InbreedingCoeff=0.9763;MQ=71.10;MQ0=0;MQRankSum=-0.192;QD=23.13;ReadPosRankSum=2.333;VQSLOD=5.6838;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:59.87:0,60,489	1/1:1,5:6:15:148,15,0	0/0:11,0:13:24.23:0,24,160	0/0:8,0:8:5.88:0,6,41	1/1:1,19:20:48.04:485,48,0	0/0:14,0:14:35.18:0,35,278	0/0:10,0:10:23.94:0,24,190	0/0:37,0:38:85.86:0,86,685	0/0:10,0:10:26.97:0,27,222	1/1:5,21:26:38.39:591,38,0	1/1:2,22:24:57.14:608,57,0	0/0:12,0:12:32.46:0,32,256	0/0:10,0:10:26.95:0,27,219	0/0:16,0:16:44.93:0,45,369	1/1:3,23:27:29.32:502,29,0	1/1:0,32:32:80.92:864,81,0	1/1:1,20:21:48.12:512,48,0	1/1:6,15:21:32.15:378,32,0	0/0:13,0:13:32.95:0,33,271	0/0:32,0:32:88.86:0,89,710	0/0:10,0:10:20.94:0,21,170	1/1:1,7:8:18.05:192,18,0	0/0:17,0:18:46.98:0,47,375	0/0:6,0:6:17.94:0,18,142	0/0:18,0:19:52.98:0,53,424	0/0:24,0:24:65.90:0,66,540	0/0:21,0:20:59.71:0,60,479	0/0:16,0:16:40.99:0,41,326
chr10	40268578	.	ACATGAGCTC	A	9260.94	PASS	AB=0.553;AC=15;AF=0.268;AN=56;BaseQRankSum=15.525;DP=620;FS=17.963;HRun=0;HaplotypeScore=169.0909;InbreedingCoeff=0.9010;MQ=81.56;MQ0=2;MQRankSum=-12.525;QD=56.82;ReadPosRankSum=-1.431;VQSLOD=2.9405;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,111,4985	0/0:10,0:10:30.10:0,30,1450	0/0:19,0:19:54.08:0,54,2097	0/0:20,0:20:57.19:0,57,2345	0/0:16,0:16:45.15:0,45,2119	0/0:21,0:21:63.22:0,63,3073	0/0:27,0:27:81.26:0,81,3621	1/1:6,25:26:57.03:1230,57,0	0/0:20,0:20:60.21:0,60,2977	0/0:8,0:8:21.07:0,21,932	0/0:8,0:8:24.08:0,24,1153	0/0:36,0:36:99:0,108,5234	0/0:17,0:17:51.17:0,51,2285	0/0:23,0:23:66.23:0,66,3178	0/0:47,0:47:99:0,138,6552	0/0:48,0:48:99:0,144,6408	0/0:28,0:28:84.29:0,84,3955	0/0:11,0:11:33.11:0,33,1591	1/1:2,22:22:60.01:1330,60,0	1/1:0,5:5:15.05:473,15,0	1/1:6,17:23:27.09:851,27,0	0/0:9,0:9:27.09:0,27,1264	0/0:8,0:8:21.07:0,21,1009	0/0:43,0:42:99:0,126,6052	1/1:0,14:14:36.12:1135,36,0	0/1:5,21:26:99:1686,0,232	1/1:3,23:26:66.02:2082,66,0	1/1:6,8:12:15.05:473,15,0
chr10	40268783	.	T	TAATAAATAAATAAATAAATA	9866.91	PASS	AB=1.000;AC=45;AF=0.978;AN=46;BaseQRankSum=-1.459;DP=248;FS=3.133;HRun=0;HaplotypeScore=126.0010;InbreedingCoeff=-0.1207;MQ=45.30;MQ0=4;MQRankSum=-1.504;QD=48.61;ReadPosRankSum=0.912;VQSLOD=4.3529;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,0:8:2.98:21,3,0	1/1:3,0:3:3.01:199,3,0	./.	./.	1/1:5,1:8:8.94:253,9,0	1/1:8,0:8:18.06:818,18,0	1/1:4,0:4:3.01:196,3,0	0/1:31,0:30:26.90:736,0,27	1/1:7,0:7:9.03:365,9,0	1/1:3,0:3:3.01:125,3,0	1/1:6,0:6:3.01:279,3,0	1/1:10,1:11:18.06:1296,18,0	1/1:6,0:7:9.03:238,9,0	1/1:8,0:8:6.02:193,6,0	./.	1/1:11,0:11:3.01:76,3,0	1/1:12,0:12:18.06:1228,18,0	1/1:14,0:14:27.09:1109,27,0	1/1:15,0:12:12.04:458,12,0	1/1:11,1:11:9.03:461,9,0	1/1:5,0:5:3.01:198,3,0	./.	./.	1/1:2,0:2:3.01:51,3,0	1/1:4,0:5:6.49:250,6,0	1/1:7,0:7:6.01:104,6,0	1/1:7,0:7:6.02:237,6,0	1/1:8,1:9:15.05:977,15,0
chr10	40268814	.	TA	T	1881.21	PASS	AC=28;AF=0.519;AN=54;BaseQRankSum=2.751;DP=171;FS=16.394;HRun=9;HaplotypeScore=40.0049;InbreedingCoeff=0.6965;MQ=58.27;MQ0=2;MQRankSum=-1.571;QD=18.63;ReadPosRankSum=0.930;VQSLOD=2.2085;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:6:12.04:0,12,138	0/0:3,0:3:9.03:0,9,104	0/0:9,0:4:0.61:0,1,31	0/0:5,0:3:1.13:0,1,32	0/0:6,0:6:15.04:0,15,173	1/1:2,8:10:20.91:182,21,0	0/0:1,0:1:0:0,0,0	1/1:10,19:28:25.32:468,25,0	1/1:2,2:4:5.98:55,6,0	0/0:4,0:4:12.03:0,12,131	0/0:3,0:3:9:0,9,81	1/1:0,7:7:21.01:192,21,0	1/1:0,5:5:15.01:137,15,0	1/1:2,3:5:8.98:82,9,0	0/0:3,0:3:3.01:0,3,35	0/0:2,0:2:3.01:0,3,35	0/0:13,0:13:24.04:0,24,262	0/0:14,0:14:27.05:0,27,298	1/1:2,7:7:21:188,21,0	1/1:2,5:6:14.99:137,15,0	1/1:0,2:2:6:54,6,0	0/0:1,0:1:3.01:0,3,35	./.	1/1:0,1:1:3:27,3,0	1/1:1,2:3:9:79,9,0	1/1:1,1:2:2.98:27,3,0	1/1:0,4:4:12.01:110,12,0	1/1:1,12:13:36.02:329,36,0
chr10	40268890	.	ATATTTATT	A	1216.54	PASS	AC=18;AF=0.500;AN=36;BaseQRankSum=2.101;DP=161;FS=2.410;HRun=0;HaplotypeScore=50.2277;InbreedingCoeff=0.5951;MQ=70.34;MQ0=3;MQRankSum=-1.095;QD=19.01;ReadPosRankSum=1.879;VQSLOD=2.2032;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	0/0:2,0:2:3.01:0,3,118	./.	0/0:8,0:5:0:0,0,0	0/0:6,0:6:9.03:0,9,235	1/1:4,2:6:6.02:151,6,0	./.	1/1:14,3:17:8.94:85,9,0	./.	0/0:5,0:5:9.03:0,9,327	0/0:7,0:7:12.04:0,12,431	./.	1/1:2,2:4:3.01:76,3,0	1/1:2,1:3:3:25,3,0	0/0:3,0:3:3.01:0,3,42	./.	0/0:13,0:13:12.04:0,12,379	0/0:19,0:19:30.06:0,30,925	1/1:4,0:3:2.98:22,3,0	1/1:4,0:4:3.01:45,3,0	./.	0/0:2,0:2:3.01:0,3,73	./.	./.	./.	1/1:3,3:6:9.03:227,9,0	1/1:2,2:4:6.02:151,6,0	1/1:10,6:15:24.08:570,24,0
chr10	40269541	.	CTT	C	634.86	PASS	AB=0.641;AC=13;AF=0.232;AN=56;BaseQRankSum=-1.094;DP=381;FS=9.001;HRun=16;HaplotypeScore=59.5539;InbreedingCoeff=0.5238;MQ=56.65;MQ0=13;MQRankSum=2.324;QD=7.05;ReadPosRankSum=5.010;VQSLOD=-0.5190;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:16:2.27:0,2,219	0/0:3,0:7:14.94:0,15,125	0/0:12,0:8:14.32:0,14,116	0/0:12,0:6:14.69:0,15,109	0/0:14,0:17:25.92:0,26,229	0/1:8,8:12:19.65:146,0,20	0/1:5,6:10:30.14:83,0,30	0/0:22,0:22:29.85:0,30,331	0/1:2,2:4:3.36:27,0,3	0/0:11,0:14:21.84:0,22,192	0/0:11,0:15:17.53:0,18,175	1/1:9,4:12:0.81:94,1,0	1/1:8,2:10:2.96:109,3,0	1/1:8,3:12:9.90:146,10,0	0/0:12,0:13:27.39:0,27,260	0/0:11,0:12:25.21:0,25,206	0/0:17,0:22:46.14:0,46,427	0/0:11,1:11:4.89:0,5,222	0/0:28,0:29:47.70:0,48,438	0/0:15,0:14:20.88:0,21,212	0/0:8,0:9:8.94:0,9,70	0/0:4,0:5:8.26:0,8,61	1/1:6,5:12:8.80:117,9,0	1/1:6,2:7:8.92:70,9,0	0/0:11,0:10:23.81:0,24,245	0/0:16,0:16:29.84:0,30,258	0/0:13,0:13:17.55:0,18,146	0/0:7,0:7:20.42:0,20,233
chr10	40269577	.	TTTC	T	1337.44	PASS	AB=0.995;AC=22;AF=0.423;AN=52;BaseQRankSum=-0.111;DP=365;FS=20.803;HRun=0;HaplotypeScore=64.1150;InbreedingCoeff=0.2930;MQ=39.07;MQ0=32;MQRankSum=0.289;QD=6.11;ReadPosRankSum=2.836;VQSLOD=0.4736;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:15:35.88:0,36,381	0/0:5,0:5:11.98:0,12,128	./.	./.	0/1:13,0:11:65.20:65,0,83	1/1:6,7:11:20.95:253,21,0	1/1:6,11:15:11.71:150,12,0	0/0:12,0:10:29.91:0,30,353	1/1:4,7:9:17.95:237,18,0	0/1:19,0:16:70.16:70,0,201	0/0:11,0:9:3.89:0,4,151	1/1:12,0:11:9.08:91,9,0	1/1:7,1:8:14.84:151,15,0	1/1:5,3:7:11.70:148,12,0	0/1:18,0:18:62.54:63,0,219	0/1:24,1:23:99:124,0,203	0/1:26,0:23:69.08:69,0,267	0/1:21,0:16:36.45:36,0,227	0/0:14,0:14:30.73:0,31,354	0/0:21,0:16:44.87:0,45,547	0/0:5,0:4:8.89:0,9,65	0/1:5,0:5:21.69:22,0,47	0/1:10,0:10:14.33:14,0,35	1/1:12,1:10:7.36:28,7,0	0/0:18,0:18:53.44:0,53,580	0/0:14,0:14:35.96:0,36,445	0/0:18,0:17:44.61:0,45,455	0/0:7,0:3:8.97:0,9,81
chr10	40269578	.	TTC	T	1379.04	PASS	AB=1.000;AC=24;AF=0.462;AN=52;BaseQRankSum=1.360;DP=354;FS=14.131;HRun=0;HaplotypeScore=56.7470;InbreedingCoeff=0.3089;MQ=39.07;MQ0=32;MQRankSum=0.771;QD=6.24;ReadPosRankSum=1.985;VQSLOD=1.2844;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:15:24.39:0,24,232	0/0:5,0:5:8.70:0,9,59	./.	./.	0/1:14,0:12:32.95:89,0,33	1/1:11,0:10:20.93:164,21,0	1/1:14,1:13:11.88:91,12,0	0/0:11,0:9:23.91:0,24,251	1/1:8,1:8:17.94:141,18,0	0/1:19,0:16:61.76:103,0,62	0/1:11,0:9:5.24:5,0,50	1/1:11,0:10:20.42:175,20,0	1/1:4,3:7:14.90:109,15,0	1/1:6,0:5:11.93:96,12,0	0/1:18,0:18:82.59:83,0,90	0/1:25,0:23:66.63:162,0,67	0/1:27,0:24:99:113,0,106	0/1:21,0:16:37.53:38,0,106	0/0:13,0:13:27.74:0,28,259	0/0:20,0:15:29.89:0,30,345	0/0:5,0:4:5.84:0,6,40	0/1:5,0:5:16.12:22,0,16	1/1:3,6:9:5.72:70,6,0	1/1:6,7:10:8.64:104,9,0	0/0:19,0:19:29.85:0,30,382	0/0:14,0:14:32.94:0,33,359	0/0:18,0:17:29.09:0,29,332	0/0:7,0:3:2.98:0,3,22
chr10	40269579	.	TC	T	1569.70	PASS	AC=34;AF=0.680;AN=50;BaseQRankSum=3.432;DP=309;FS=1.388;HRun=2;HaplotypeScore=43.8622;InbreedingCoeff=0.8427;MQ=39.49;MQ0=32;MQRankSum=0.917;QD=7.97;ReadPosRankSum=0.067;VQSLOD=0.8793;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:14:20.89:0,21,165	1/1:3,0:3:0.89:2,1,0	./.	./.	1/1:12,0:11:17.21:136,17,0	1/1:11,0:10:20.56:123,21,0	1/1:15,0:13:11.70:68,12,0	0/0:10,0:9:19.17:0,19,164	1/1:9,0:8:17.65:107,18,0	1/1:13,0:10:19.04:159,19,0	1/1:9,0:7:5.96:44,6,0	1/1:8,2:9:26.41:179,26,0	1/1:8,0:8:17.73:117,18,0	1/1:7,0:6:14.82:102,15,0	1/1:14,0:14:12.73:132,13,0	1/1:24,0:22:29.12:235,29,0	1/1:20,0:17:19.61:160,20,0	1/1:18,0:13:6.13:64,6,0	0/0:11,0:11:27.59:0,28,213	0/0:18,0:13:24.85:0,25,237	0/0:3,0:2:3:0,3,26	1/1:4,0:4:7.62:39,8,0	1/1:6,1:7:5.88:37,6,0	1/1:11,2:10:8.83:54,9,0	0/0:17,0:17:32.42:0,32,275	0/0:12,0:12:31.24:0,31,288	0/0:16,0:15:32.61:0,33,280	./.
chr10	40269663	.	C	CT	2878.54	PASS	AB=0.886;AC=29;AF=0.518;AN=56;BaseQRankSum=-6.017;DP=467;FS=1.746;HRun=12;HaplotypeScore=88.4430;InbreedingCoeff=0.2797;MQ=60.28;MQ0=11;MQRankSum=3.825;QD=8.27;ReadPosRankSum=-1.343;VQSLOD=2.6865;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:23:37.53:292,38,0	1/1:2,0:2:3:29,3,0	0/0:31,0:9:13.60:0,14,84	0/1:41,0:12:11.15:11,0,16	0/1:21,7:30:50.72:257,0,51	0/0:17,0:15:31.98:0,32,176	0/0:9,0:9:0.54:0,1,29	1/1:17,2:17:4.79:134,5,0	0/0:6,0:5:5.96:0,6,43	1/1:8,12:20:11.09:254,11,0	0/1:5,13:17:7.87:220,0,8	0/0:8,0:13:2.25:0,2,26	0/0:12,0:12:13.38:0,13,70	0/0:9,0:10:18.56:0,19,101	1/1:7,9:15:1.15:118,1,0	0/1:12,1:12:28.81:67,0,29	1/1:14,10:22:14.77:389,15,0	1/1:6,13:18:5.01:197,5,0	0/1:29,2:30:9.19:246,0,9	1/1:10,1:11:23.39:155,23,0	0/0:4,0:4:3.45:0,3,23	1/1:3,6:9:12.02:117,12,0	0/0:5,0:5:4.07:0,4,12	0/0:8,0:11:6.14:0,6,18	1/1:18,0:18:19.44:140,19,0	1/1:15,2:17:6.45:213,6,0	0/1:24,1:25:7.44:163,0,7	0/1:12,0:12:44.24:54,0,44
chr10	40269670	.	TTTTTTGTTTTTTTTTG	T	2753.61	PASS	AB=0.808;AC=16;AF=0.286;AN=56;BaseQRankSum=0.115;DP=476;FS=3.931;HRun=0;HaplotypeScore=194.4151;InbreedingCoeff=0.6841;MQ=59.72;MQ0=14;MQRankSum=-6.068;QD=24.15;ReadPosRankSum=2.995;VQSLOD=2.5718;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:66:0,66,2547	0/0:2,0:2:0:0,0,0	0/1:34,0:8:10.54:11,0,49	0/0:48,0:12:13.27:0,13,142	0/0:33,0:33:73.49:0,73,4062	1/1:10,6:14:36.11:1168,36,0	0/1:3,5:8:79.41:278,0,79	0/0:21,0:19:5.04:0,5,346	1/1:5,1:5:6.01:84,6,0	0/0:21,0:21:42.14:0,42,2464	0/0:17,0:17:42:0,42,2214	1/1:14,0:13:22.88:478,23,0	1/1:2,11:13:8.54:352,9,0	1/1:9,0:9:17.99:257,18,0	0/0:16,0:15:24.08:0,24,1394	0/0:8,0:8:9.92:0,10,297	0/0:26,0:24:6:0,6,1846	0/0:20,0:19:30.55:0,31,1005	0/0:25,0:24:11.88:0,12,1226	0/0:10,0:10:20.96:0,21,728	0/0:7,0:6:12.04:0,12,458	0/0:11,0:11:21.07:0,21,1031	1/1:4,0:4:3:114,3,0	1/1:10,0:10:11.94:194,12,0	0/0:15,0:15:18.06:0,18,635	0/0:19,0:19:25.18:0,25,1510	0/0:25,0:25:51.65:0,52,1850	0/0:12,0:12:23.66:0,24,950
chr10	40269675	.	TG	T	1650.19	PASS	AB=0.981;AC=35;AF=0.625;AN=56;BaseQRankSum=6.353;DP=467;FS=8.344;HRun=1;HaplotypeScore=86.7204;InbreedingCoeff=0.3587;MQ=57.91;MQ0=12;MQRankSum=-0.436;QD=5.50;ReadPosRankSum=-0.365;VQSLOD=-0.1395;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:28:48.51:253,49,0	1/1:1,0:1:2.04:6,2,0	0/0:33,3:7:14.51:0,15,109	0/0:53,0:12:2.03:0,2,43	0/1:30,0:30:2.68:3,0,396	1/1:15,0:13:8.18:112,8,0	0/1:8,0:8:10.92:41,0,11	1/1:21,0:18:22.69:164,23,0	1/1:6,0:5:3.47:11,3,0	0/0:17,0:17:33.89:0,34,256	0/0:18,0:18:8.58:0,9,255	1/1:11,0:11:23.70:149,24,0	0/1:13,0:13:12.55:20,0,13	0/1:8,1:9:8.76:48,0,9	0/0:13,0:12:16.51:0,17,103	0/1:6,0:6:18.80:19,0,63	0/1:26,1:25:36.14:36,0,205	0/0:17,1:18:4.05:0,4,129	1/1:23,1:22:30.60:201,31,0	1/1:11,0:11:27.97:134,28,0	1/1:7,0:6:9.48:33,9,0	0/0:12,0:12:22.71:0,23,152	1/1:4,0:4:2.70:16,3,0	1/1:8,0:8:14.40:78,14,0	1/1:15,0:15:27.07:153,27,0	0/1:19,0:19:37.94:112,0,38	1/1:25,0:25:42.56:177,43,0	1/1:12,0:12:10.64:67,11,0
chr10	40269676	.	GT	G	2379.85	PASS	AB=0.954;AC=31;AF=0.554;AN=56;BaseQRankSum=3.925;DP=463;FS=4.978;HRun=12;HaplotypeScore=84.3988;InbreedingCoeff=0.6840;MQ=57.60;MQ0=12;MQRankSum=-1.397;QD=10.13;ReadPosRankSum=0.165;VQSLOD=3.1675;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:24,4:28:52.50:429,53,0	0/0:1,0:1:0:0,0,0	0/0:36,0:7:8.37:0,8,61	0/0:53,0:12:9.47:0,9,61	0/0:29,0:29:72.15:0,72,785	1/1:10,5:13:32.45:193,32,0	1/1:7,0:7:8.17:41,8,0	0/1:19,2:18:17.64:142,0,18	1/1:4,1:4:5.99:52,6,0	0/0:18,0:18:20.73:0,21,471	0/0:18,0:18:45.13:0,45,517	1/1:6,5:11:15.61:122,16,0	0/1:13,0:13:2.56:10,0,3	1/1:5,4:9:6.41:87,6,0	0/0:12,0:11:23.81:0,24,233	0/0:5,0:5:9.91:0,10,105	0/0:27,0:25:39.17:0,39,570	0/0:18,0:18:38.15:0,38,375	1/1:22,2:22:13.73:189,14,0	1/1:9,2:11:26.21:202,26,0	1/1:5,3:7:12:110,12,0	0/0:10,0:10:24.07:0,24,274	1/1:2,0:2:2.21:7,2,0	1/1:6,3:9:8.95:70,9,0	1/1:14,2:16:29.74:229,30,0	0/1:18,1:19:73.35:261,0,73	1/1:20,5:25:26.71:257,27,0	1/1:8,4:12:21.46:182,21,0
chr10	40269685	.	TG	T	972.08	PASS	AB=0.976;AC=24;AF=0.444;AN=54;BaseQRankSum=4.793;DP=463;FS=2.084;HRun=1;HaplotypeScore=91.5671;InbreedingCoeff=0.3740;MQ=53.53;MQ0=12;MQRankSum=-3.519;QD=4.65;ReadPosRankSum=-2.656;VQSLOD=-0.4716;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:25,1:26:41.03:41,0,65	./.	0/0:29,0:6:8.68:0,9,73	0/0:51,2:11:8.14:0,8,66	0/0:29,0:29:78.62:0,79,881	1/1:17,0:15:43.28:276,43,0	1/1:7,0:7:10.28:47,10,0	0/1:21,0:18:46.04:62,0,46	1/1:5,0:4:7.51:49,8,0	0/0:19,0:18:49.08:0,49,556	0/0:19,0:19:37.18:0,37,579	1/1:13,0:13:31.88:204,32,0	1/1:11,0:11:1.11:17,1,0	1/1:7,2:9:15.73:124,16,0	0/0:10,0:9:26.71:0,27,256	0/1:4,0:4:12.52:13,0,72	0/0:22,2:22:13.76:0,14,551	0/0:18,1:19:34.71:0,35,362	0/1:19,0:17:39.71:40,0,100	0/1:11,1:12:16.88:17,0,47	0/1:8,0:7:3.80:4,0,31	0/0:11,0:11:26.81:0,27,297	1/1:6,0:6:14.49:102,14,0	1/1:10,0:10:20.65:140,21,0	0/0:19,0:19:13.93:0,14,127	0/0:21,0:21:14.61:0,15,196	0/1:22,2:24:0.15:0,0,108	0/1:17,0:17:21.41:21,0,72
chr10	40269686	.	GT	G	381.45	PASS	AB=0.870;AC=12;AF=0.222;AN=54;BaseQRankSum=6.742;DP=464;FS=3.362;HRun=9;HaplotypeScore=93.3891;InbreedingCoeff=0.4241;MQ=51.09;MQ0=12;MQRankSum=-5.739;QD=4.77;ReadPosRankSum=2.266;VQSLOD=0.8489;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:52.83:0,53,560	./.	0/0:26,0:3:2.74:0,3,12	0/0:51,1:10:8.60:0,9,44	0/0:30,0:30:81.25:0,81,1082	1/1:12,5:15:30.79:214,31,0	1/1:7,0:7:11.52:76,12,0	0/0:21,0:18:34.40:0,34,269	0/1:5,1:5:17.74:23,0,18	0/0:19,0:18:54.14:0,54,696	0/0:19,0:19:54.11:0,54,702	0/1:8,5:13:10.38:114,0,10	0/1:12,0:12:11.97:12,0,20	0/1:8,1:9:11.77:32,0,12	0/0:10,0:9:26.95:0,27,325	0/0:3,0:3:6.02:0,6,80	0/0:25,0:23:39.42:0,39,670	0/0:18,0:18:36.11:0,36,459	0/0:19,0:17:38.08:0,38,422	0/0:12,0:12:28.22:0,28,300	0/0:8,0:7:17.77:0,18,157	0/0:11,0:11:27.09:0,27,361	1/1:6,0:6:0.54:4,1,0	1/1:8,2:10:2.18:56,2,0	0/0:20,0:20:48.01:0,48,497	0/0:21,0:21:53.72:0,54,536	0/0:25,0:25:64.95:0,65,564	0/0:17,0:17:35.16:0,35,333
chr10	40269720	.	G	GT	4497.50	PASS	AB=0.776;AC=18;AF=0.321;AN=56;BaseQRankSum=-4.310;DP=486;FS=4.808;HRun=8;HaplotypeScore=67.5685;InbreedingCoeff=0.8579;MQ=54.75;MQ0=3;MQRankSum=0.674;QD=22.60;ReadPosRankSum=2.368;VQSLOD=5.6917;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,23:27:60.17:685,60,0	0/0:2,0:2:6:0,6,55	0/0:8,0:2:6:0,6,55	0/1:15,0:5:1.29:1,0,55	0/0:36,0:36:99:0,103,928	0/0:16,0:15:44.90:0,45,393	0/0:8,0:8:15.85:0,16,122	1/1:4,18:21:47.54:552,48,0	0/0:7,0:6:8.02:0,8,104	0/0:23,0:23:30.14:0,30,517	0/0:24,0:24:68.41:0,68,611	0/0:17,0:17:45:0,45,406	0/0:17,0:17:26.81:0,27,233	0/0:12,0:12:30:0,30,274	0/0:17,0:16:41.59:0,42,344	0/0:13,0:13:27.01:0,27,247	0/0:25,0:25:70.23:0,70,619	0/0:17,0:17:39.01:0,39,355	1/1:11,8:15:33.94:354,34,0	1/1:4,15:19:39.12:450,39,0	1/1:0,8:9:23.86:254,24,0	0/0:16,0:16:39:0,39,352	0/0:17,0:17:45:0,45,405	0/0:12,0:12:26.99:0,27,240	1/1:3,17:20:42.12:480,42,0	0/1:3,12:16:1.98:385,0,2	1/1:5,26:32:75.71:818,76,0	1/1:1,18:19:45.13:519,45,0
chr10	40270327	.	TATATATATATATA	T	342.91	PASS	AB=1.000;AC=10;AF=0.357;AN=28;BaseQRankSum=0.582;DP=77;FS=0.000;HRun=0;HaplotypeScore=50.3620;InbreedingCoeff=0.2095;MQ=45.95;MQ0=4;MQRankSum=-3.073;QD=19.05;ReadPosRankSum=-0.095;VQSLOD=1.2614;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	0/0:10,0:4:6.35:0,6,50	1/1:1,0:1:0.89:2,1,0	1/1:0,2:2:3.01:117,3,0	1/1:0,1:1:3.01:109,3,0	0/0:22,0:16:18.90:0,19,561	1/1:0,2:2:3.01:117,3,0	./.	./.	./.	0/1:3,0:3:27.55:69,0,28	0/0:1,0:1:3.01:0,3,34	./.	./.	0/0:15,0:14:22.88:0,23,900	0/0:5,0:5:8.02:0,8,495	0/0:1,0:1:3.01:0,3,40	./.	./.	./.	./.	./.	0/0:2,0:2:2.09:0,2,77	0/0:1,0:1:3.01:0,3,56	./.	0/1:9,0:9:30.14:30,0,33
chr10	40270332	.	ATATATATATT	A	524.32	PASS	AB=1.000;AC=13;AF=0.500;AN=26;BaseQRankSum=1.770;DP=75;FS=3.128;HRun=0;HaplotypeScore=40.3966;InbreedingCoeff=0.3900;MQ=35.22;MQ0=5;MQRankSum=-1.982;QD=13.44;ReadPosRankSum=2.829;VQSLOD=0.9796;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:2:2.84:15,3,0	./.	./.	0/0:7,0:2:5.91:0,6,50	0/0:2,0:2:2.94:0,3,18	1/1:2,0:2:3.01:58,3,0	1/1:1,0:1:3.01:71,3,0	0/1:19,0:13:32.77:140,0,33	1/1:2,0:2:3.01:58,3,0	./.	./.	./.	1/1:2,0:2:3.01:69,3,0	./.	./.	./.	0/0:14,0:13:24.96:0,25,429	0/0:8,0:8:16.53:0,17,366	./.	./.	./.	./.	./.	./.	0/0:2,0:2:2.30:0,2,7	0/0:1,0:1:0:0,0,0	./.	1/1:4,5:9:11.49:220,11,0
chr10	40270706	.	ATCCAATGAGAT	A	1828.48	PASS	AC=16;AF=0.296;AN=54;BaseQRankSum=1.041;DP=293;FS=31.133;HRun=0;HaplotypeScore=93.6761;InbreedingCoeff=0.8398;MQ=93.03;MQ0=2;MQRankSum=-3.724;QD=45.71;ReadPosRankSum=-3.508;VQSLOD=0.6137;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:75.26:0,75,4287	1/1:0,3:3:6.02:197,6,0	0/0:22,0:19:40.88:0,41,2035	0/0:19,0:12:26.06:0,26,1114	1/1:0,3:3:6.02:164,6,0	0/0:14,0:14:39.13:0,39,2042	0/0:10,0:10:30.10:0,30,1599	0/0:14,0:14:39.07:0,39,2082	0/0:10,0:10:30.10:0,30,1531	1/1:0,3:3:6.02:222,6,0	./.	0/0:8,0:8:24.07:0,24,1060	0/0:9,0:9:27.09:0,27,1494	0/0:20,0:20:60.21:0,60,3188	1/1:0,6:6:6.02:223,6,0	1/1:0,5:5:2.77:111,3,0	1/1:0,0:10:17.66:640,18,0	1/1:0,0:6:9.03:333,9,0	0/0:19,0:19:57.20:0,57,3060	0/0:6,0:6:18.06:0,18,1026	0/0:15,0:14:36.12:0,36,1697	1/1:0,3:4:3.01:112,3,0	0/0:4,0:4:12.04:0,12,711	0/0:11,0:11:33.11:0,33,1871	0/0:9,0:9:27.09:0,27,1495	0/0:15,0:15:45.15:0,45,2557	0/0:12,0:12:36.12:0,36,2132	0/0:8,0:8:24.05:0,24,1208
chr10	40271458	.	ATCTT	A	1075.77	PASS	AB=0.772;AC=7;AF=0.125;AN=56;BaseQRankSum=5.223;DP=467;FS=50.310;HRun=0;HaplotypeScore=93.3115;InbreedingCoeff=-0.1527;MQ=66.72;MQ0=2;MQRankSum=-5.992;QD=14.54;ReadPosRankSum=1.973;VQSLOD=1.2909;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:73.11:0,73,1346	0/0:5,0:5:12.04:0,12,220	0/0:27,0:12:25.39:0,25,485	0/0:25,0:14:18.84:0,19,344	0/0:19,0:19:37.56:0,38,1015	0/1:9,12:21:99:672,0,502	0/1:5,2:6:39.19:39,0,313	0/0:37,1:38:69.78:0,70,1914	0/1:6,5:10:99:100,0,304	0/0:20,0:20:60.19:0,60,1177	0/0:16,0:16:40.13:0,40,958	0/1:7,2:9:99:111,0,254	0/1:8,1:9:48.44:48,0,413	0/1:7,1:8:29.65:30,0,332	0/0:10,0:10:27.09:0,27,566	0/0:21,0:21:54.18:0,54,951	0/0:26,0:26:63.21:0,63,1142	0/0:18,0:18:42.12:0,42,820	0/0:13,0:12:36.12:0,36,777	0/0:14,0:14:42.13:0,42,829	0/0:6,0:6:15.05:0,15,281	0/0:2,0:2:6.02:0,6,145	0/1:5,4:9:99:205,0,262	0/0:8,0:8:9:0,9,191	0/0:21,0:20:36.12:0,36,688	0/0:14,0:14:42.11:0,42,786	0/0:30,0:30:87.27:0,87,1646	0/0:24,0:24:57.19:0,57,1059
chr10	40271462	.	T	TA	4950.25	PASS	AB=0.808;AC=50;AF=0.893;AN=56;BaseQRankSum=-1.219;DP=496;FS=3.241;HRun=13;HaplotypeScore=79.7886;InbreedingCoeff=0.0351;MQ=66.94;MQ0=2;MQRankSum=-1.458;QD=9.98;ReadPosRankSum=0.758;VQSLOD=4.4923;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:10,27:38:36.90:455,37,0	1/1:2,4:6:6.01:56,6,0	0/1:24,1:10:22.42:22,0,44	0/1:24,0:15:3.43:3,0,27	1/1:6,18:24:0.79:255,1,0	1/1:23,0:22:30.81:133,31,0	1/1:9,0:8:4.66:14,5,0	1/1:13,24:37:65.89:567,66,0	1/1:14,0:13:14.43:67,14,0	1/1:8,13:21:15.51:273,16,0	1/1:6,4:17:6.36:183,6,0	1/1:11,0:12:11.31:49,11,0	1/1:9,0:10:7.01:35,7,0	1/1:10,0:10:10.39:45,10,0	0/1:5,5:10:1.09:110,0,1	1/1:2,19:21:48.05:443,48,0	1/1:5,26:31:51.04:466,51,0	0/1:7,11:18:14.14:168,0,14	1/1:8,7:14:18.01:162,18,0	0/1:5,10:15:7.21:135,0,7	1/1:1,4:6:5.96:47,6,0	0/1:2,0:2:0:0,0,0	1/1:9,0:9:7.77:35,8,0	1/1:3,0:9:2.84:14,3,0	1/1:4,19:22:30.02:275,30,0	1/1:4,11:15:26.94:225,27,0	1/1:9,17:26:9.85:369,10,0	1/1:5,18:25:24.14:342,24,0
chr10	40272495	.	T	TA	1638.42	PASS	AB=1.000;AC=20;AF=0.385;AN=52;BaseQRankSum=2.765;DP=231;FS=15.549;HRun=5;HaplotypeScore=36.6286;InbreedingCoeff=0.5463;MQ=80.25;MQ0=5;MQRankSum=0.099;QD=14.00;ReadPosRankSum=1.320;VQSLOD=1.3905;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,2:28:37.46:235,37,0	0/0:1,0:1:3.01:0,3,32	./.	0/1:12,0:10:4.39:4,0,99	0/0:4,0:4:1.23:0,1,28	0/0:12,0:12:8.59:0,9,121	0/0:8,0:8:14.12:0,14,158	1/1:7,15:19:43.13:453,43,0	0/0:2,0:2:6.02:0,6,64	0/0:6,0:6:0.76:0,1,22	0/0:5,0:5:8.22:0,8,89	./.	0/0:3,0:3:9.02:0,9,96	0/1:4,0:4:8.43:8,0,67	0/0:2,0:2:2.21:0,2,30	0/0:5,0:5:5.09:0,5,62	0/0:24,0:24:12.78:0,13,197	0/0:28,0:28:16.37:0,16,249	1/1:5,12:17:40.22:421,40,0	1/1:1,1:2:5.05:45,5,0	1/1:2,0:2:3.01:37,3,0	0/0:4,0:4:6.01:0,6,64	0/0:1,0:1:3.01:0,3,32	0/0:2,0:2:6.02:0,6,64	1/1:1,2:3:6.02:79,6,0	1/1:7,1:8:19:158,19,0	1/1:2,10:11:23.11:281,23,0	1/1:1,6:7:8.62:89,9,0
chr10	40272499	.	A	AAT	1751.39	PASS	AB=0.748;AC=20;AF=0.476;AN=42;BaseQRankSum=-1.952;DP=221;FS=1.774;HRun=0;HaplotypeScore=41.9001;InbreedingCoeff=0.1996;MQ=77.53;MQ0=6;MQRankSum=-0.233;QD=13.90;ReadPosRankSum=2.768;VQSLOD=3.0483;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:28:15.63:289,16,0	./.	./.	0/0:14,0:10:0.88:0,1,2	1/1:1,0:3:6:53,6,0	0/1:4,7:11:20.66:176,0,21	0/1:5,2:7:29.70:42,0,30	0/0:24,0:22:1.12:0,1,152	./.	1/1:1,3:5:12.01:165,12,0	0/1:3,3:6:26.83:56,0,27	./.	0/0:3,0:3:6.01:0,6,61	0/1:2,0:4:29.37:29,0,41	1/1:1,1:2:3.01:48,3,0	1/1:2,2:4:3.01:48,3,0	1/1:8,13:21:27.09:429,27,0	0/1:10,15:26:84.23:521,0,84	0/0:15,0:15:13.79:0,14,64	0/0:3,0:3:7.05:0,7,37	./.	./.	1/1:2,0:2:3:25,3,0	./.	0/0:2,0:2:1.77:0,2,5	0/0:8,0:8:15.11:0,15,80	0/0:12,0:11:10.27:0,10,52	0/1:7,0:7:0.15:13,0,0
chr10	40272500	.	AT	A	633.43	PASS	AB=0.859;AC=10;AF=0.192;AN=52;BaseQRankSum=0.369;DP=221;FS=0.000;HRun=1;HaplotypeScore=41.5466;InbreedingCoeff=0.0737;MQ=73.81;MQ0=6;MQRankSum=-1.075;QD=5.92;ReadPosRankSum=-1.828;VQSLOD=-0.2709;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:25:34.41:153,34,0	0/0:1,0:1:3.01:0,3,45	./.	0/1:15,0:9:6.69:7,0,102	0/0:3,0:3:8.99:0,9,80	0/0:12,0:12:27:0,27,264	0/0:7,0:7:18.03:0,18,198	0/1:25,1:23:99:252,0,195	0/0:2,0:2:6.02:0,6,64	0/0:5,0:5:14.96:0,15,122	0/0:6,0:6:15.03:0,15,168	./.	0/0:3,0:3:9.03:0,9,124	0/0:4,0:4:6.65:0,7,100	0/0:2,0:2:6:0,6,56	0/0:4,0:4:9.01:0,9,88	0/0:21,0:21:47.83:0,48,458	0/0:26,0:26:63.61:0,64,618	0/1:14,1:15:99:115,0,115	0/1:3,2:5:42.03:48,0,42	1/1:0,1:1:3.01:37,3,0	0/0:2,0:2:6.02:0,6,64	0/0:2,0:2:6:0,6,57	0/0:2,0:2:6.02:0,6,64	0/0:2,0:2:4.74:0,5,17	0/1:3,5:8:27.33:138,0,27	0/1:11,1:11:22.46:22,0,51	0/0:7,0:7:7.75:0,8,53
chr10	40272944	.	CA	C	1301.55	PASS	AB=0.832;AC=32;AF=0.571;AN=56;BaseQRankSum=-1.803;DP=487;FS=2.537;HRun=16;HaplotypeScore=84.5806;InbreedingCoeff=0.1971;MQ=56.82;MQ0=16;MQRankSum=0.132;QD=3.41;ReadPosRankSum=1.067;VQSLOD=0.5798;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,21:26:12.76:293,13,0	1/1:4,0:9:4.79:17,5,0	0/0:39,0:8:5.62:0,6,29	0/1:31,0:8:8.51:9,0,13	1/1:11,2:26:30.14:97,30,0	0/0:22,0:23:26.66:0,27,187	0/0:7,0:12:12.92:0,13,57	0/1:19,5:26:14.05:123,0,14	0/0:10,0:10:11.37:0,11,76	0/1:11,0:17:10.45:12,0,10	0/1:17,2:24:2.60:37,0,3	0/0:11,0:12:12.57:0,13,106	0/0:8,0:7:7.62:0,8,52	0/1:9,0:9:3.27:3,0,50	1/1:10,0:20:14.85:46,15,0	0/1:13,0:18:0.10:18,0,0	1/1:12,0:16:6.55:17,7,0	1/1:7,0:12:9.51:25,10,0	0/1:12,4:17:15.89:93,0,16	1/1:10,13:24:21.92:220,22,0	0/1:3,2:5:12.06:12,0,13	0/1:5,0:7:5.38:6,0,5	0/1:13,0:13:13.68:14,0,38	0/1:6,0:8:2.81:3,0,35	1/1:4,10:14:8.90:82,9,0	0/1:12,6:19:18.12:88,0,18	1/1:6,8:16:18.20:122,18,0	1/1:7,13:20:7.84:140,8,0
chr10	40272958	.	AAAG	A	3620.62	PASS	AB=1.000;AC=26;AF=0.464;AN=56;BaseQRankSum=1.976;DP=481;FS=10.382;HRun=0;HaplotypeScore=94.5249;InbreedingCoeff=0.3789;MQ=57.33;MQ0=18;MQRankSum=-1.714;QD=13.17;ReadPosRankSum=-1.297;VQSLOD=2.0697;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:84.88:0,85,759	1/1:7,0:7:20.91:214,21,0	0/1:33,0:5:7.32:7,0,18	0/0:26,0:7:2.79:0,3,49	1/1:26,1:27:68.32:681,68,0	0/1:22,0:21:66.74:67,0,96	0/1:12,0:12:16.65:66,0,17	0/0:29,0:29:44.33:0,44,537	0/0:7,0:7:12.38:0,12,75	1/1:14,0:14:32.68:331,33,0	1/1:25,0:24:53.23:469,53,0	0/1:11,0:11:37.97:38,0,73	0/1:7,0:6:4.34:4,0,44	0/0:9,0:8:2.17:0,2,50	1/1:20,0:20:45.07:534,45,0	1/1:13,1:13:35.72:384,36,0	1/1:12,0:12:23.75:235,24,0	1/1:11,2:13:23.77:262,24,0	0/1:21,0:19:2.27:2,0,291	0/0:24,0:24:30.06:0,30,381	0/0:4,0:4:2.81:0,3,26	1/1:10,0:10:3.71:158,4,0	0/1:17,0:17:26.07:140,0,26	0/1:10,0:10:29.41:29,0,35	0/0:17,0:17:13.40:0,13,185	0/0:16,0:16:20.04:0,20,295	0/0:22,0:22:46.85:0,47,379	0/0:19,0:19:38.76:0,39,341
chr10	40272960	.	AG	A	3150.13	PASS	AB=0.968;AC=40;AF=0.714;AN=56;BaseQRankSum=6.283;DP=471;FS=18.155;HRun=1;HaplotypeScore=80.2684;InbreedingCoeff=0.2789;MQ=57.65;MQ0=17;MQRankSum=-4.022;QD=8.22;ReadPosRankSum=-0.477;VQSLOD=-0.4794;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:39.94:0,40,318	1/1:7,0:7:20.32:117,20,0	0/0:31,1:5:1.10:0,1,14	0/1:24,0:7:11.98:12,0,25	1/1:27,0:27:69.58:417,70,0	1/1:22,0:21:54.79:360,55,0	1/1:12,0:12:25.53:170,26,0	0/1:28,2:30:17.23:17,0,300	1/1:8,0:8:15.01:89,15,0	1/1:14,0:14:26.53:135,27,0	1/1:24,1:24:49.12:311,49,0	1/1:10,1:11:11.77:83,12,0	1/1:7,0:6:11.31:63,11,0	1/1:7,1:7:14.20:73,14,0	1/1:17,3:20:43.88:270,44,0	1/1:14,0:13:27.60:172,28,0	1/1:10,2:12:23.50:144,23,0	1/1:14,0:14:23.44:144,23,0	0/1:19,0:17:32.92:33,0,153	0/1:20,2:22:57.32:57,0,123	0/0:3,0:3:2.04:0,2,7	0/1:10,0:10:3.76:93,0,4	1/1:16,2:18:47.95:392,48,0	1/1:8,1:9:17.50:139,17,0	0/1:15,0:15:2.41:2,0,69	0/1:14,1:15:1.34:1,0,147	0/1:19,1:20:17.43:17,0,163	0/0:18,1:19:4.45:0,4,111
chr10	40272961	.	GA	G	2815.15	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=4.154;DP=468;FS=3.859;HRun=16;HaplotypeScore=81.8075;InbreedingCoeff=0.6340;MQ=58.04;MQ0=15;MQRankSum=-3.391;QD=12.35;ReadPosRankSum=2.435;VQSLOD=3.2806;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:92.02:0,92,981	1/1:2,5:7:19.77:181,20,0	0/1:31,0:5:3.95:4,0,21	0/1:21,0:7:17.79:18,0,40	1/1:3,23:26:68.35:679,68,0	0/0:23,0:22:28.09:0,28,198	0/0:12,0:12:9.19:0,9,44	0/0:29,1:30:28.99:0,29,755	0/0:8,0:8:10.76:0,11,71	1/1:6,8:14:21.12:298,21,0	1/1:9,16:24:54.18:511,54,0	0/0:11,0:11:13.33:0,13,104	0/0:7,0:6:7.58:0,8,50	0/1:7,0:6:2.73:3,0,48	1/1:11,9:20:40.77:361,41,0	1/1:6,8:13:37.77:346,38,0	1/1:3,9:12:19.91:174,20,0	1/1:4,10:14:23.22:199,23,0	0/0:21,0:19:48.47:0,48,509	0/0:21,0:21:30.56:0,31,450	0/0:3,0:3:5.98:0,6,54	1/1:8,2:10:3.58:222,4,0	0/1:18,0:18:16.74:17,0,31	0/1:9,0:9:2.87:3,0,33	0/0:15,0:15:26.98:0,27,286	0/0:15,0:15:33.20:0,33,402	0/0:20,0:20:35.71:0,36,487	0/0:20,0:20:40.87:0,41,423
chr10	40274242	.	AAGG	A	885.70	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=1.936;DP=552;FS=0.000;HRun=0;HaplotypeScore=121.3954;InbreedingCoeff=0.9713;MQ=61.14;MQ0=2;MQRankSum=-4.459;QD=30.54;ReadPosRankSum=0.064;VQSLOD=3.9298;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:66.23:0,66,1443	0/0:11,0:11:33.11:0,33,754	0/0:21,0:17:48.12:0,48,932	0/0:17,1:10:23.86:0,24,437	0/0:21,0:21:63.21:0,63,1372	0/0:16,0:16:45.14:0,45,991	0/0:21,0:21:54.18:0,54,1156	0/0:33,0:33:97.55:0,98,2086	0/0:16,0:16:42.14:0,42,947	0/0:24,0:24:66.23:0,66,1516	0/0:29,0:29:81.27:0,81,1769	1/1:1,13:14:33.11:562,33,0	0/0:20,0:20:57.18:0,57,1220	0/0:16,0:16:48.15:0,48,1048	0/0:31,0:31:84.27:0,84,1831	0/0:17,0:17:36.12:0,36,786	0/0:36,0:36:63.20:0,63,1331	0/0:28,0:28:51.17:0,51,1146	0/0:20,0:19:57.20:0,57,1313	0/0:14,0:14:39.13:0,39,894	0/0:12,0:11:27.09:0,27,618	0/0:17,0:17:39.13:0,39,898	1/1:0,7:7:18.06:307,18,0	1/1:1,7:8:9.03:153,9,0	0/0:15,0:15:27.09:0,27,622	0/0:24,0:24:72.24:0,72,1618	0/0:24,0:23:57.20:0,57,1298	0/0:10,0:10:18.06:0,18,415
chr10	40274262	.	A	AAG	3866.17	PASS	AB=1.000;AC=25;AF=0.463;AN=54;BaseQRankSum=-6.861;DP=587;FS=17.778;HRun=0;HaplotypeScore=141.4502;InbreedingCoeff=0.7257;MQ=55.50;MQ0=6;MQRankSum=5.707;QD=13.29;ReadPosRankSum=-2.996;VQSLOD=1.3626;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:27:43.11:0,43,233	0/0:9,0:9:14.36:0,14,81	0/0:21,0:10:2.99:0,3,33	0/0:19,0:8:9:0,9,89	0/0:22,0:21:26.70:0,27,220	0/0:17,0:16:14.91:0,15,121	0/1:24,0:24:64.56:65,0,89	1/1:17,18:32:50.97:644,51,0	0/1:16,0:16:28.31:57,0,28	0/0:24,0:24:32.10:0,32,177	0/0:29,0:29:51.56:0,52,337	1/1:16,0:14:9:79,9,0	1/1:19,0:17:14.99:131,15,0	1/1:22,0:22:2.56:138,3,0	0/0:26,0:26:37.08:0,37,192	0/0:15,0:15:28.41:0,28,140	0/0:35,0:35:31.25:0,31,154	0/0:27,0:27:8.58:0,9,44	1/1:9,14:23:38.78:534,39,0	1/1:6,12:19:26.96:359,27,0	1/1:4,12:16:11.06:226,11,0	0/0:18,0:18:17.37:0,17,111	0/1:11,0:10:0:0,0,0	./.	1/1:3,2:22:24.01:249,24,0	1/1:8,20:29:45.03:781,45,0	1/1:10,17:26:30.10:464,30,0	1/1:1,9:10:9.03:140,9,0
chr10	40274281	.	AGAGAGAAT	A	8131.95	PASS	AB=0.996;AC=27;AF=0.500;AN=54;BaseQRankSum=5.563;DP=587;FS=6.326;HRun=0;HaplotypeScore=155.2404;InbreedingCoeff=0.3666;MQ=54.07;MQ0=11;MQRankSum=-7.586;QD=21.86;ReadPosRankSum=5.879;VQSLOD=3.5917;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:26:99:535,0,147	1/1:1,8:9:18.06:414,18,0	0/0:24,0:11:21.05:0,21,339	0/0:24,0:9:17.85:0,18,300	1/1:2,15:16:28.33:450,28,0	0/1:22,0:21:99:171,0,450	0/1:22,0:22:99:200,0,363	0/0:37,0:34:93.79:0,94,1964	0/1:16,0:16:99:112,0,320	1/1:3,23:26:52.43:1039,52,0	1/1:3,25:28:60.19:1207,60,0	0/1:18,0:16:70.45:70,0,150	0/1:21,0:19:99:105,0,255	0/1:22,0:22:99:238,0,232	1/1:0,20:20:39.13:1068,39,0	1/1:0,16:16:30.10:858,30,0	1/1:0,34:34:33.11:944,33,0	1/1:2,19:21:9.03:255,9,0	0/0:27,0:26:60.20:0,60,1515	0/0:14,0:14:36.12:0,36,997	0/0:22,0:21:42.13:0,42,1089	1/1:0,16:16:18.06:414,18,0	0/1:11,0:9:0.27:0,0,0	./.	0/0:25,0:24:33.11:0,33,965	0/1:25,1:26:53.42:53,0,2201	0/0:24,0:23:45.15:0,45,1262	0/0:12,0:12:15.05:0,15,441
chr10	40274287	.	AATGAAT	A	3594.85	PASS	AB=0.961;AC=28;AF=0.519;AN=54;BaseQRankSum=3.064;DP=525;FS=12.605;HRun=0;HaplotypeScore=141.3567;InbreedingCoeff=-0.0845;MQ=54.48;MQ0=11;MQRankSum=-8.112;QD=8.90;ReadPosRankSum=4.125;VQSLOD=1.9378;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:69.17:0,69,1170	0/1:8,0:8:39.90:40,0,52	0/0:17,0:8:20.80:0,21,550	0/0:15,0:7:14.83:0,15,357	0/1:17,0:16:0.33:0,0,259	0/1:16,4:20:78.69:498,0,79	0/1:20,1:22:73.82:499,0,74	0/1:37,0:34:99:305,0,1974	0/1:14,1:15:40.92:298,0,41	0/1:25,0:25:54.26:54,0,87	0/1:27,0:27:87.91:88,0,239	1/1:6,1:7:7.39:223,7,0	1/1:10,1:9:12.38:356,12,0	0/1:12,3:15:13.12:414,0,13	1/1:20,0:20:1.66:128,2,0	1/1:16,0:16:27.92:131,28,0	1/1:34,0:34:30.75:146,31,0	1/1:19,0:19:8.23:36,8,0	0/1:26,0:25:99:127,0,1313	0/1:12,0:12:52.68:53,0,789	0/0:22,0:21:45.15:0,45,1356	0/1:16,0:16:30.14:30,0,141	1/1:5,0:3:2.75:68,3,0	./.	0/0:21,0:20:33.11:0,33,943	0/1:26,0:26:59.16:59,0,1634	0/1:23,0:23:41.17:41,0,1192	0/0:11,0:11:15.05:0,15,441
chr10	40276031	.	CT	C	2907.99	PASS	AB=0.980;AC=26;AF=0.464;AN=56;BaseQRankSum=-2.560;DP=513;FS=27.289;HRun=11;HaplotypeScore=100.9537;InbreedingCoeff=0.8042;MQ=63.33;MQ0=11;MQRankSum=-2.427;QD=11.77;ReadPosRankSum=4.410;VQSLOD=1.3501;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,1:35:56.52:0,57,794	1/1:7,4:11:14.03:157,14,0	0/0:24,0:15:17.13:0,17,192	0/1:23,1:19:21.67:22,0,153	1/1:15,7:22:16.77:263,17,0	0/0:19,0:20:44.24:0,44,503	0/0:9,0:10:16.42:0,16,143	0/0:12,0:35:63.88:0,64,347	0/0:15,0:15:31.23:0,31,291	1/1:10,10:20:10.54:278,11,0	1/1:9,6:14:26.12:213,26,0	1/1:1,10:11:17.98:148,18,0	0/0:9,0:8:3.50:0,4,60	0/1:12,0:10:5.46:5,0,18	1/1:12,5:17:11.43:177,11,0	1/1:10,8:18:28.51:245,29,0	1/1:14,10:24:49.14:383,49,0	1/1:8,6:13:3.59:221,4,0	0/0:10,0:16:31.45:0,31,165	0/0:7,0:25:52.89:0,53,329	0/0:1,0:11:20.18:0,20,123	1/1:6,9:15:34.99:258,35,0	1/1:3,14:17:38.94:320,39,0	1/1:5,21:24:53.86:436,54,0	0/0:7,0:14:37.51:0,38,221	0/0:7,0:17:40.07:0,40,215	0/0:3,0:8:11.43:0,11,58	0/0:7,0:20:41.55:0,42,256
chr10	40276037	.	T	TTTTTC	4584.66	PASS	AB=0.812;AC=12;AF=0.214;AN=56;BaseQRankSum=-1.707;DP=538;FS=8.760;HRun=0;HaplotypeScore=139.5087;InbreedingCoeff=0.1113;MQ=60.01;MQ0=21;MQRankSum=-5.868;QD=24.39;ReadPosRankSum=-1.419;VQSLOD=3.4283;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:38:81.22:0,81,1365	0/1:10,4:14:27.65:421,0,28	0/0:23,0:14:16.61:0,17,227	0/1:21,0:16:5.15:5,0,192	0/1:18,7:23:25.50:591,0,25	0/0:22,0:21:59.66:0,60,870	0/0:9,0:9:20.32:0,20,234	0/0:35,0:34:71.79:0,72,486	0/0:16,0:16:27.92:0,28,458	0/1:13,3:18:59.20:457,0,59	1/1:10,4:13:5.27:448,5,0	0/0:14,0:14:26.79:0,27,258	0/0:2,0:8:9.02:0,9,102	0/0:4,0:8:21.05:0,21,250	0/1:14,4:19:12.26:459,0,12	0/1:14,7:19:22.64:656,0,23	1/1:22,5:25:33.34:874,33,0	0/1:12,2:14:49.90:286,0,50	0/0:21,0:20:46.59:0,47,298	0/0:23,0:23:60.01:0,60,485	0/0:15,0:14:18.76:0,19,157	0/1:10,4:14:28.83:386,0,29	0/0:20,0:18:44.18:0,44,387	0/0:23,0:21:3.20:0,3,441	0/0:16,0:16:44.44:0,44,336	0/0:21,0:18:50.07:0,50,352	0/0:9,0:8:17.79:0,18,123	0/0:25,0:22:45.82:0,46,374
chr10	40276043	.	C	CT	3225.28	PASS	AB=0.773;AC=17;AF=0.304;AN=56;BaseQRankSum=1.200;DP=537;FS=3.653;HRun=11;HaplotypeScore=99.0932;InbreedingCoeff=0.0708;MQ=56.92;MQ0=24;MQRankSum=-6.814;QD=13.16;ReadPosRankSum=2.993;VQSLOD=3.9055;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:44:78.18:0,78,827	0/1:6,8:14:86.92:298,0,87	0/1:19,0:12:34.43:39,0,34	0/0:18,0:14:14.12:0,14,166	0/1:12,11:21:99:268,0,157	1/1:5,18:21:60.18:763,60,0	1/1:1,7:8:18.06:226,18,0	0/0:30,1:29:24.54:0,25,454	1/1:0,14:15:29.58:363,30,0	0/1:12,7:19:99:220,0,240	0/1:9,7:15:99:189,0,115	0/0:16,0:16:35.57:0,36,354	0/0:9,0:8:1.82:0,2,5	0/1:10,1:9:1.19:75,0,1	0/1:11,7:18:99:220,0,117	0/1:10,10:18:99:262,0,167	0/1:22,7:26:99:285,0,274	0/1:11,2:12:84.84:85,0,188	0/0:19,0:18:30.20:0,30,322	0/0:24,0:24:3.33:0,3,286	0/0:19,0:18:3.77:0,4,129	0/1:11,4:14:99:104,0,223	0/0:18,0:16:48.09:0,48,493	0/0:23,0:21:51.11:0,51,532	0/0:15,0:15:43.92:0,44,343	0/0:24,0:21:55.44:0,55,489	0/0:10,0:9:23.23:0,23,178	0/0:21,0:18:43.13:0,43,302
chr10	40276142	.	CT	C	2965.92	PASS	AB=0.768;AC=35;AF=0.625;AN=56;BaseQRankSum=7.192;DP=455;FS=6.446;HRun=12;HaplotypeScore=43.5141;InbreedingCoeff=0.7492;MQ=63.10;MQ0=24;MQRankSum=2.886;QD=11.77;ReadPosRankSum=4.124;VQSLOD=2.8213;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,1:37:75.64:0,76,886	1/1:0,3:3:8.97:70,9,0	0/0:24,0:12:30.93:0,31,297	0/0:29,0:9:12.01:0,12,116	1/1:9,17:25:20.32:341,20,0	1/1:2,14:16:38.85:302,39,0	1/1:3,6:10:13.97:99,14,0	0/0:23,0:22:26.95:0,27,250	1/1:5,6:11:14.91:116,15,0	1/1:4,7:9:23.91:186,24,0	1/1:1,11:12:26.88:209,27,0	1/1:3,12:16:31.90:238,32,0	0/1:3,9:12:13.37:136,0,13	1/1:7,8:15:28.87:213,29,0	1/1:6,8:13:20.88:162,21,0	1/1:0,15:15:32.87:255,33,0	1/1:7,17:24:37.86:284,38,0	1/1:4,6:9:14.93:116,15,0	0/1:10,2:11:16.45:16,0,200	0/0:18,0:18:36.05:0,36,350	0/0:23,0:22:51.10:0,51,518	1/1:3,6:7:14.92:116,15,0	1/1:5,5:9:10.81:75,11,0	1/1:3,13:15:29.84:232,30,0	0/0:19,0:18:30.05:0,30,300	0/0:14,0:14:30.05:0,30,300	0/0:14,0:14:35.92:0,36,343	0/1:6,1:5:14.23:14,0,46
chr10	40276724	.	AGAAG	A	7487.24	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=7.809;DP=831;FS=7.396;HRun=0;HaplotypeScore=192.4959;InbreedingCoeff=0.9973;MQ=79.78;MQ0=0;MQRankSum=-3.054;QD=29.25;ReadPosRankSum=5.542;VQSLOD=3.9351;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,120,2731	1/1:7,7:14:18.04:281,18,0	0/0:39,0:38:69.18:0,69,1501	0/0:33,0:32:59.39:0,59,1373	1/1:7,23:30:36.12:618,36,0	0/0:23,0:23:54.18:0,54,1222	0/0:24,0:24:69.17:0,69,1626	0/0:34,0:34:81.26:0,81,1818	0/0:25,0:25:66.22:0,66,1435	1/1:3,18:21:51.17:875,51,0	1/1:4,22:26:39.13:669,39,0	0/0:33,0:33:84.23:0,84,1939	0/0:29,0:29:69.24:0,69,1640	0/0:30,0:30:75.13:0,75,1645	1/1:4,38:42:66.23:1133,66,0	1/1:7,35:42:99:1697,99,0	1/1:7,13:20:30.10:515,30,0	1/1:3,16:19:39.13:669,39,0	0/0:32,0:32:72.24:0,72,1683	0/0:35,0:35:87.30:0,87,2052	0/0:39,0:39:99:0,99,2394	1/1:8,34:42:60.21:1030,60,0	0/0:23,0:23:48.16:0,48,1161	0/0:42,0:42:87.27:0,87,1948	0/0:19,0:19:51.17:0,51,979	0/0:30,1:31:39.39:0,39,1941	0/0:25,0:25:69.22:0,69,1573	0/0:8,0:8:18.06:0,18,425
chr10	40278481	.	T	TG	5830.96	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-15.248;DP=675;FS=2.938;HRun=5;HaplotypeScore=63.9534;InbreedingCoeff=1.0000;MQ=89.10;MQ0=0;MQRankSum=-2.785;QD=33.51;ReadPosRankSum=1.747;VQSLOD=5.4228;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,114,1225	0/0:13,0:13:36.09:0,36,387	0/0:31,0:31:78.17:0,78,823	0/0:21,0:21:52.60:0,53,488	0/0:25,0:25:66.12:0,66,685	1/1:0,28:28:75.24:987,75,0	1/1:0,18:18:51.17:671,51,0	0/0:26,0:26:66.16:0,66,709	1/1:0,15:15:42.14:549,42,0	0/0:34,0:34:96.24:0,96,1032	0/0:27,0:27:66.14:0,66,700	1/1:0,20:20:51.17:668,51,0	1/1:5,17:22:39.13:509,39,0	1/1:1,21:22:57.19:750,57,0	0/0:17,0:17:48.12:0,48,516	0/0:30,0:30:87.22:0,87,935	0/0:21,0:21:63.16:0,63,677	0/0:18,0:18:48.08:0,48,503	0/0:26,0:26:66.16:0,66,709	0/0:29,0:29:78.19:0,78,838	0/0:23,0:23:66.17:0,66,709	0/0:24,0:24:66.16:0,66,709	1/1:0,32:32:84.27:1105,84,0	1/1:1,16:17:45.15:592,45,0	0/0:18,0:18:51.13:0,51,548	0/0:29,0:29:84.21:0,84,903	0/0:30,0:29:87.20:0,87,927	0/0:16,0:16:48.12:0,48,516
chr10	40279365	.	G	GAA	652.97	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=2.383;DP=535;FS=0.635;HRun=12;HaplotypeScore=79.0910;InbreedingCoeff=0.7882;MQ=59.05;MQ0=9;MQRankSum=0.639;QD=7.77;ReadPosRankSum=-1.614;VQSLOD=0.6503;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:34:59.57:0,60,464	0/0:5,0:5:12.01:0,12,111	0/0:18,0:7:14.92:0,15,87	0/0:13,0:8:11.19:0,11,86	0/0:17,0:17:8.38:0,8,106	0/0:14,0:15:19.53:0,20,229	0/0:21,0:21:43.92:0,44,383	0/0:22,0:22:47.19:0,47,441	0/0:9,0:10:8.62:0,9,170	0/0:25,0:25:47.93:0,48,429	0/0:22,0:24:20.67:0,21,326	1/1:5,9:15:14.54:177,15,0	0/0:11,0:11:14.90:0,15,139	0/0:16,0:15:31.97:0,32,269	0/0:20,0:20:36.61:0,37,350	0/0:12,0:13:30.60:0,31,245	0/0:17,0:19:38.35:0,38,359	0/0:19,0:22:36.96:0,37,368	0/0:15,0:13:23.30:0,23,254	0/1:26,0:24:5.02:5,0,209	0/0:11,0:12:20.62:0,21,174	0/0:15,0:15:32.68:0,33,287	1/1:5,8:14:14.54:177,15,0	1/1:1,23:28:35.09:435,35,0	0/0:18,0:18:32.54:0,33,336	0/0:28,0:28:53.52:0,54,513	0/0:33,0:33:57.89:0,58,626	0/0:17,0:17:16.36:0,16,141
chr10	40279378	.	GAGAA	G	1076.89	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.324;DP=513;FS=15.502;HRun=0;HaplotypeScore=108.1875;InbreedingCoeff=0.9603;MQ=66.44;MQ0=6;MQRankSum=-1.383;QD=35.90;ReadPosRankSum=3.016;VQSLOD=2.8821;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,27:29:63.22:1172,63,0	0/0:4,0:4:12.04:0,12,321	0/0:22,0:11:28.17:0,28,556	0/0:21,0:15:39.12:0,39,639	0/0:15,0:15:36.12:0,36,768	0/0:12,0:12:33.11:0,33,886	0/0:20,0:20:60.16:0,60,1506	0/0:25,0:25:66.23:0,66,1716	0/0:10,0:10:30.10:0,30,797	0/0:29,0:29:78.27:0,78,1868	0/0:23,0:23:63.17:0,63,1569	0/0:12,0:12:21.07:0,21,515	0/0:12,0:12:36.12:0,36,915	0/0:17,0:17:48.11:0,48,1066	0/0:21,0:21:51.10:0,51,1199	0/0:15,0:15:45.15:0,45,1091	0/0:19,0:19:54.08:0,54,1156	0/0:20,0:20:53.78:0,54,1359	0/0:18,0:16:48.15:0,48,1133	0/0:20,0:18:45.15:0,45,1106	0/0:14,0:14:36.12:0,36,888	0/0:13,0:13:39.05:0,39,889	0/0:16,0:16:30.10:0,30,700	0/0:26,0:26:37.47:0,37,1018	0/0:18,0:18:54.16:0,54,1305	0/0:23,0:23:63.16:0,63,1531	0/0:30,0:30:78.26:0,78,2041	0/0:7,0:7:21.07:0,21,563
chr10	40279446	.	GGCCCTGGGTTCGGTCCCCA	G	15532.73	PASS	AB=0.776;AC=18;AF=0.333;AN=54;BaseQRankSum=14.631;DP=545;FS=5.273;HRun=0;HaplotypeScore=254.9789;InbreedingCoeff=0.8462;MQ=52.46;MQ0=16;MQRankSum=-12.482;QD=98.93;ReadPosRankSum=3.576;VQSLOD=4.2848;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:30:63.69:0,64,5696	1/1:1,3:4:9.03:489,9,0	./.	0/1:11,0:5:3.12:3,0,30	1/1:2,14:15:36.12:1721,36,0	0/0:15,0:14:39.13:0,39,3496	0/0:27,0:27:69.68:0,70,4709	0/0:18,0:8:24.04:0,24,1455	0/0:16,0:15:42.14:0,42,2924	1/1:6,18:22:51.16:2363,51,0	1/1:4,10:13:27.09:1466,27,0	0/0:18,0:18:54.14:0,54,4658	0/0:25,0:24:66.23:0,66,5713	0/0:22,0:21:57.18:0,57,4746	1/1:7,17:24:45.15:2444,45,0	1/1:5,15:20:42.14:2281,42,0	0/1:4,17:21:99:2324,0,211	1/1:6,5:11:15.05:815,15,0	0/0:19,0:15:42.08:0,42,2614	0/0:18,0:18:54.17:0,54,3927	0/0:26,0:25:69.22:0,69,5501	1/1:1,11:12:30.10:1628,30,0	0/0:27,0:27:69.24:0,69,6336	0/0:35,0:35:84.29:0,84,7327	0/0:22,0:22:63.22:0,63,5699	0/0:26,0:25:75.26:0,75,6397	0/0:24,0:23:69.23:0,69,4959	0/0:14,0:11:33.09:0,33,2523
chr10	40279631	.	GA	G	2398.58	PASS	AB=0.563;AC=14;AF=0.250;AN=56;BaseQRankSum=-12.034;DP=619;FS=3.882;HRun=14;HaplotypeScore=122.1883;InbreedingCoeff=0.7517;MQ=61.36;MQ0=7;MQRankSum=6.635;QD=12.76;ReadPosRankSum=2.198;VQSLOD=2.9118;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,2:25:8.62:0,9,363	0/0:0,0:4:11.36:0,11,57	0/0:40,0:16:4.84:0,5,84	0/0:28,0:17:23.01:0,23,157	0/0:4,0:22:57.29:0,57,310	0/0:11,0:14:23.12:0,23,134	0/0:11,0:11:15.76:0,16,76	1/1:6,15:23:11.35:273,11,0	0/0:16,0:16:22.76:0,23,114	0/0:9,0:35:82.10:0,82,442	0/0:7,0:17:31.81:0,32,180	0/0:9,0:17:34.29:0,34,177	0/0:15,0:18:32.84:0,33,160	0/0:11,0:11:7.39:0,7,38	0/0:8,0:29:59.90:0,60,312	0/0:6,0:27:48.43:0,48,250	0/0:6,0:40:91.39:0,91,499	0/0:6,0:21:39.69:0,40,210	1/1:2,22:26:65.34:419,65,0	0/1:5,19:25:49.78:237,0,50	1/1:4,23:28:58.50:392,59,0	0/0:3,0:17:34.27:0,34,178	0/0:12,0:14:32.59:0,33,166	0/0:20,0:22:23.85:0,24,115	1/1:5,11:17:32.64:214,33,0	1/1:3,22:27:69.41:464,69,0	1/1:4,20:25:59.42:399,59,0	0/1:4,11:16:15.59:190,0,16
chr10	40279642	.	A	AAAAAAAAAC	4703.40	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=-4.303;DP=695;FS=3.386;HRun=0;HaplotypeScore=194.4044;InbreedingCoeff=0.8810;MQ=64.13;MQ0=9;MQRankSum=-9.900;QD=25.02;ReadPosRankSum=0.237;VQSLOD=4.5164;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:72:0,72,1320	0/0:5,0:5:12.80:0,13,87	0/1:45,0:14:0.48:0,0,242	0/0:41,0:23:27.88:0,28,402	0/0:24,0:23:46.59:0,47,497	1/1:7,12:24:4.33:636,4,0	1/1:3,2:14:10.90:525,11,0	0/0:27,0:27:76.61:0,77,1158	1/1:3,6:18:8.29:685,8,0	0/0:41,0:41:53.61:0,54,706	0/0:18,0:18:6.53:0,7,207	1/1:15,0:17:35.91:672,36,0	1/1:17,0:16:38.06:371,38,0	1/1:4,0:15:9.02:279,9,0	0/0:26,0:26:65.69:0,66,550	0/0:26,0:26:38.35:0,38,445	0/0:43,0:43:99:0,111,1056	0/0:19,0:19:42.84:0,43,469	0/0:31,0:31:91.71:0,92,1404	0/0:36,0:36:96.03:0,96,1385	0/0:32,0:31:78.17:0,78,1329	0/0:14,0:14:19.14:0,19,233	1/1:6,1:16:21.33:877,21,0	1/1:6,0:22:27.09:660,27,0	0/0:17,0:17:42.53:0,43,733	0/0:36,0:36:99:0,102,1666	0/0:28,0:28:78.64:0,79,1343	0/0:16,0:16:45.04:0,45,899
chr10	40281136	.	C	CGTGTGT	4774.94	PASS	AB=0.713;AC=26;AF=0.500;AN=52;BaseQRankSum=-0.690;DP=636;FS=6.005;HRun=0;HaplotypeScore=155.8271;InbreedingCoeff=0.5615;MQ=63.91;MQ0=7;MQRankSum=-6.106;QD=12.77;ReadPosRankSum=-1.718;VQSLOD=3.0600;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:30,2:38:5.59:141,6,0	0/0:11,0:11:15.05:0,15,306	./.	./.	0/1:16,0:18:99:135,0,137	1/1:9,0:18:7.36:112,7,0	0/0:14,0:18:0.23:0,0,1	1/1:19,0:19:15.04:296,15,0	1/1:13,0:24:11.32:184,11,0	0/0:12,0:14:11.12:0,11,189	0/0:15,0:16:20.88:0,21,391	0/0:27,0:29:42.14:0,42,834	1/1:12,0:29:17.67:229,18,0	0/1:11,0:31:98.32:206,0,98	0/1:15,0:31:62.59:68,0,63	0/0:16,0:24:5.31:0,5,10	0/0:12,0:15:7.79:0,8,126	0/0:17,0:20:11.25:0,11,306	1/1:14,1:17:12.04:325,12,0	1/1:16,13:30:29.43:968,29,0	1/1:29,0:41:7.69:369,8,0	0/0:11,0:25:15.06:0,15,195	0/0:21,0:24:33.98:0,34,575	0/0:27,0:29:38.85:0,39,691	1/1:10,5:20:12.04:312,12,0	1/1:18,3:24:21.07:530,21,0	0/1:9,3:21:36.99:475,0,37	1/1:3,5:11:15.05:426,15,0
chr10	40282065	.	AAAAAG	A	1926.83	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=6.675;DP=626;FS=1.346;HRun=0;HaplotypeScore=120.4327;InbreedingCoeff=0.9780;MQ=72.93;MQ0=5;MQRankSum=-2.254;QD=22.94;ReadPosRankSum=3.188;VQSLOD=3.2310;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,117,3008	0/0:11,0:11:24.08:0,24,561	0/0:47,0:22:32.78:0,33,369	0/0:43,0:24:39.87:0,40,579	0/0:38,0:37:99:0,102,2669	1/1:5,21:26:42.14:793,42,0	1/1:5,12:17:21.07:395,21,0	0/0:28,0:28:66.03:0,66,1446	1/1:6,8:14:12.04:228,12,0	0/0:22,0:22:60.20:0,60,1516	0/0:22,0:22:51.16:0,51,1274	0/0:5,0:19:39.13:0,39,831	1/1:2,8:10:18.06:341,18,0	1/1:6,11:17:18.06:341,18,0	0/0:22,0:22:54.17:0,54,1420	0/0:17,0:17:42.14:0,42,1162	0/0:27,0:27:63.22:0,63,1758	0/0:33,0:33:75.26:0,75,1927	0/0:17,0:16:33.11:0,33,830	0/0:16,0:16:42.14:0,42,1147	0/0:15,0:15:30.10:0,30,826	0/0:14,0:14:27.09:0,27,725	0/0:5,0:18:33.09:0,33,659	0/0:3,0:15:18.06:0,18,384	0/0:21,0:21:45.15:0,45,1201	0/0:24,0:24:57.20:0,57,1493	0/0:21,0:21:54.19:0,54,1421	0/0:6,0:6:12.04:0,12,347
chr10	40283558	.	CT	C	6337.33	PASS	AB=0.933;AC=27;AF=0.482;AN=56;BaseQRankSum=11.532;DP=578;FS=9.061;HRun=10;HaplotypeScore=65.0681;InbreedingCoeff=0.8798;MQ=71.70;MQ0=0;MQRankSum=0.234;QD=20.92;ReadPosRankSum=4.803;VQSLOD=5.4407;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,33:35:95.96:833,96,0	1/1:0,13:13:32.98:287,33,0	0/1:12,1:14:22.48:22,0,94	0/0:10,0:10:5.53:0,6,128	1/1:2,29:31:74.86:641,75,0	0/0:24,1:25:39.96:0,40,652	0/0:25,0:25:44.25:0,44,657	0/0:27,1:29:45.97:0,46,718	0/0:3,0:3:6.02:0,6,66	1/1:3,24:27:71.98:625,72,0	1/1:3,23:26:4.70:464,5,0	1/1:1,19:20:50.99:443,51,0	0/0:27,0:27:44.07:0,44,665	0/0:19,0:19:44.84:0,45,468	1/1:2,19:21:41.99:365,42,0	1/1:1,22:23:62.98:547,63,0	1/1:0,25:25:65.99:573,66,0	1/1:1,12:13:32.99:287,33,0	0/0:14,0:14:33.09:0,33,365	0/0:26,0:26:69.17:0,69,749	0/0:16,0:16:42.10:0,42,456	1/1:2,14:16:41.99:365,42,0	1/1:0,21:21:56.98:495,57,0	1/1:2,16:18:44.99:391,45,0	0/0:16,1:17:18.88:0,19,404	0/0:23,1:24:34.08:0,34,584	0/0:27,0:27:72.18:0,72,787	0/0:12,0:12:36.10:0,36,398
chr10	40284285	.	CT	C	5411.37	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=12.315;DP=535;FS=6.950;HRun=10;HaplotypeScore=59.0439;InbreedingCoeff=0.9821;MQ=68.00;MQ0=2;MQRankSum=0.932;QD=18.34;ReadPosRankSum=4.983;VQSLOD=5.3800;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:42.08:0,42,447	1/1:1,7:8:18:156,18,0	0/0:11,0:9:19.52:0,20,176	0/0:14,1:11:13.12:0,13,112	1/1:4,27:31:74.97:651,75,0	1/1:3,20:23:56.99:495,57,0	1/1:3,9:12:17.99:156,18,0	0/0:29,0:29:63.05:0,63,669	1/1:4,14:18:38.98:339,39,0	1/1:6,19:25:26.79:462,27,0	1/1:3,22:25:59.96:521,60,0	1/1:2,0:17:24.44:72,24,0	1/1:0,13:13:38.99:339,39,0	1/1:1,11:12:32.99:286,33,0	1/1:2,14:16:35.98:313,36,0	1/1:1,17:18:47.99:417,48,0	1/1:1,13:13:35.99:313,36,0	1/1:4,15:19:41.99:365,42,0	0/0:23,0:23:54.13:0,54,585	0/0:36,0:36:99:0,105,1146	0/0:17,0:17:33:0,33,330	1/1:2,16:18:44.98:391,45,0	1/1:2,0:15:26.48:78,26,0	1/1:1,0:11:20.37:60,20,0	0/0:24,0:24:60.13:0,60,646	0/0:25,2:27:17.06:0,17,636	0/0:32,0:32:87.08:0,87,928	0/0:6,0:6:9.02:0,9,100
chr10	40285267	.	T	TAA	2651.76	PASS	AB=1.000;AC=26;AF=0.464;AN=56;BaseQRankSum=-2.090;DP=440;FS=0.974;HRun=12;HaplotypeScore=66.7183;InbreedingCoeff=0.8053;MQ=61.82;MQ0=3;MQRankSum=0.265;QD=15.78;ReadPosRankSum=-0.385;VQSLOD=2.3440;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:82.92:0,83,818	1/1:3,0:3:4.26:45,4,0	0/0:11,0:1:2.50:0,2,9	0/1:15,0:10:5.55:6,0,26	1/1:7,10:17:26.88:283,27,0	0/0:3,0:20:46.64:0,47,203	0/0:0,0:8:21.81:0,22,94	0/0:28,0:28:36.97:0,37,383	0/0:3,0:18:32.84:0,33,142	1/1:5,12:18:35.60:457,36,0	1/1:4,10:14:27.09:379,27,0	1/1:2,0:9:12.48:43,12,0	0/0:0,0:10:24.70:0,25,107	0/0:5,0:15:18.41:0,18,90	1/1:3,7:10:26.61:319,27,0	1/1:1,6:7:6.02:84,6,0	1/1:7,17:26:32.08:383,32,0	1/1:19,9:26:59.37:709,59,0	0/0:26,0:29:38.67:0,39,451	0/0:25,0:25:38.80:0,39,462	0/0:11,0:11:26.94:0,27,250	1/1:2,2:4:3.01:42,3,0	1/1:4,0:8:9.86:34,10,0	1/1:0,1:5:12.99:77,13,0	0/0:18,0:18:38.96:0,39,359	0/0:15,0:15:35.99:0,36,327	0/0:20,0:24:39.99:0,40,407	0/1:3,0:3:0.64:1,0,38
chr10	40286071	.	GACAGACAGACAGACAC	G	3530.69	PASS	AB=1.000;AC=29;AF=0.558;AN=52;BaseQRankSum=7.940;DP=466;FS=0.000;HRun=0;HaplotypeScore=142.7743;InbreedingCoeff=0.3280;MQ=47.54;MQ0=36;MQRankSum=2.961;QD=10.45;ReadPosRankSum=0.125;VQSLOD=2.1395;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:20:0.92:402,0,1	1/1:6,0:5:15.01:253,15,0	0/0:8,0:4:6.01:0,6,67	0/0:16,0:11:10.86:0,11,140	1/1:18,0:17:6.01:96,6,0	1/1:7,0:5:9.02:212,9,0	0/1:21,0:18:34.18:379,0,34	0/0:27,0:22:48.04:0,48,792	0/1:11,0:9:37.46:54,0,37	1/1:1,13:13:32.86:505,33,0	1/1:14,0:12:21.48:297,21,0	0/0:12,0:12:3:0,3,25	0/1:9,0:5:16.02:16,0,17	./.	0/1:35,0:32:4.73:220,0,5	1/1:16,0:14:12.01:257,12,0	1/1:38,0:36:6.37:124,6,0	1/1:2,0:11:8.86:247,9,0	0/1:23,0:16:12.83:13,0,611	0/1:11,0:10:2.52:3,0,235	0/0:30,0:27:48.06:0,48,1001	1/1:3,0:3:3.01:103,3,0	./.	1/1:41,0:38:33.97:349,34,0	0/0:16,0:14:8.10:0,8,604	0/1:15,0:13:0.26:0,0,636	0/1:22,0:20:0.54:1,0,321	0/0:14,0:12:30.09:0,30,658
chr10	40286075	.	GACAGACAGACACACACAC	G	3156.73	PASS	AB=0.960;AC=23;AF=0.460;AN=50;BaseQRankSum=5.680;DP=455;FS=2.821;HRun=0;HaplotypeScore=144.6296;InbreedingCoeff=-0.0889;MQ=47.86;MQ0=37;MQRankSum=2.030;QD=10.05;ReadPosRankSum=0.398;VQSLOD=2.0128;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:21,0:19:99:217,0,152	1/1:6,0:5:15.04:222,15,0	0/0:4,0:1:2.96:0,3,19	0/0:10,0:8:1:0,1,41	1/1:4,13:17:6.02:144,6,0	0/1:8,0:6:72.80:129,0,73	0/1:19,0:16:99:232,0,172	0/0:27,0:22:36.41:0,36,441	0/0:11,0:9:10.85:0,11,205	0/1:14,0:13:99:183,0,203	0/1:14,0:12:42.98:102,0,43	./.	0/0:9,0:5:2.96:0,3,30	./.	0/1:7,27:31:65.34:370,0,65	1/1:4,13:15:12.04:388,12,0	1/1:5,34:37:6.47:188,6,0	1/1:12,0:11:2.52:243,3,0	0/1:18,0:12:28.36:28,0,517	0/1:12,0:11:55.91:56,0,138	0/0:30,0:27:44.32:0,44,709	1/1:1,2:3:3.01:154,3,0	./.	0/1:41,0:38:31.18:495,0,31	0/0:17,0:14:4.85:0,5,492	0/1:16,0:14:99:149,0,511	0/1:22,0:20:12.31:12,0,212	0/0:12,0:11:30.02:0,30,490
chr10	40286081	.	CAG	C	855.33	PASS	AB=1.000;AC=22;AF=0.440;AN=50;BaseQRankSum=6.659;DP=459;FS=15.136;HRun=0;HaplotypeScore=86.0618;InbreedingCoeff=-0.1427;MQ=44.59;MQ0=41;MQRankSum=0.919;QD=2.69;ReadPosRankSum=3.153;VQSLOD=0.3789;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:22:85.20:85,0,86	1/1:7,0:5:12.81:80,13,0	./.	0/0:3,0:2:3.85:0,4,22	0/1:19,0:18:10.96:11,0,26	0/1:9,0:7:0.80:60,0,1	0/1:19,0:16:41.02:109,0,41	0/0:25,0:20:27.19:0,27,188	0/1:11,0:9:22.63:29,0,23	0/1:14,0:13:88.69:89,0,97	0/1:12,0:10:23.97:42,0,24	./.	1/1:5,9:9:2.99:42,3,0	1/1:4,2:3:0.47:1,0,0	0/1:33,0:30:26.49:42,0,26	0/1:17,0:15:17.25:17,0,53	0/1:39,0:37:8.89:9,0,24	0/1:14,0:13:23.41:23,0,23	0/0:18,0:11:29.93:0,30,262	0/1:13,0:12:1.36:1,0,63	0/0:30,0:26:41.56:0,42,323	1/1:3,0:3:2.88:15,3,0	./.	0/1:42,0:39:5.56:341,0,6	0/0:18,0:15:26.99:0,27,234	0/0:15,0:13:17.72:0,18,221	0/1:20,0:18:5.49:5,0,73	0/0:13,0:11:26.86:0,27,206
chr10	40286083	.	GACACACACACACAC	G	1688.38	PASS	AB=0.884;AC=28;AF=0.583;AN=48;BaseQRankSum=3.891;DP=467;FS=16.778;HRun=0;HaplotypeScore=133.6369;InbreedingCoeff=0.2601;MQ=44.69;MQ0=43;MQRankSum=-1.247;QD=4.94;ReadPosRankSum=3.769;VQSLOD=1.6343;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:24:23.87:0,24,718	1/1:4,0:5:6.55:21,7,0	./.	./.	1/1:19,0:18:6.01:95,6,0	0/0:8,0:7:6.02:0,6,208	0/0:18,0:16:14.26:0,14,376	1/1:23,0:18:1.24:3,1,0	0/1:11,0:9:0.56:1,0,216	0/0:15,0:13:13.30:0,13,348	0/0:11,0:10:5.05:0,5,86	./.	0/0:14,0:9:6.02:0,6,105	0/0:6,0:3:3.01:0,3,99	0/1:32,0:30:85.23:174,0,85	1/1:17,0:15:12.03:240,12,0	1/1:39,0:37:5.80:99,6,0	0/1:14,0:13:52.38:125,0,52	1/1:15,0:11:7.22:104,7,0	1/1:6,6:12:3.48:86,3,0	1/1:25,0:26:6.01:82,6,0	1/1:3,0:3:3.01:90,3,0	./.	0/1:45,0:43:69.32:84,0,69	1/1:18,0:15:6:66,6,0	0/1:10,6:14:99:333,0,167	0/1:9,11:18:11.47:99,0,11	1/1:14,0:12:8.76:143,9,0
chr10	40287945	.	TA	T	2498.45	PASS	AC=26;AF=0.481;AN=54;BaseQRankSum=1.517;DP=304;FS=6.807;HRun=8;HaplotypeScore=52.3137;InbreedingCoeff=0.8073;MQ=75.37;MQ0=3;MQRankSum=-1.473;QD=20.31;ReadPosRankSum=1.661;VQSLOD=3.6484;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:21.03:0,21,226	0/0:4,0:4:12.04:0,12,143	0/0:34,0:11:7.91:0,8,62	0/0:44,2:19:6.62:0,7,97	0/0:12,0:12:30.08:0,30,340	1/1:4,16:20:30.05:290,30,0	1/1:0,2:2:6.01:58,6,0	1/1:11,17:28:69.08:649,69,0	1/1:1,4:5:8.95:76,9,0	0/0:3,0:3:8.96:0,9,91	0/0:3,0:3:9.03:0,9,104	0/0:1,0:1:3.01:0,3,36	1/1:0,1:1:3:29,3,0	1/1:0,6:6:12.02:116,12,0	0/0:2,0:2:6.02:0,6,70	0/0:8,0:8:21.05:0,21,239	0/0:24,0:24:51.04:0,51,563	0/0:26,0:26:63.07:0,63,693	1/1:4,9:12:27.04:257,27,0	1/1:1,5:6:14.97:135,15,0	1/1:2,2:4:3:29,3,0	0/0:2,0:2:6.02:0,6,71	0/0:3,0:3:9.02:0,9,97	./.	1/1:0,11:11:33.05:317,33,0	1/1:2,7:9:24.04:231,24,0	1/1:2,2:4:12:110,12,0	1/1:0,14:14:42.07:405,42,0
chr10	40287962	.	AT	A	5782.19	PASS	AB=0.970;AC=37;AF=0.661;AN=56;BaseQRankSum=0.631;DP=321;FS=2.470;HRun=4;HaplotypeScore=44.3833;InbreedingCoeff=0.7976;MQ=73.58;MQ0=2;MQRankSum=-2.744;QD=24.19;ReadPosRankSum=2.213;VQSLOD=3.6808;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,14:14:21.06:250,21,0	1/1:0,4:4:12.04:143,12,0	0/1:29,1:11:2.53:3,0,90	0/0:39,0:16:4.59:0,5,69	1/1:0,13:13:36.11:430,36,0	0/0:16,0:16:42.09:0,42,485	0/0:4,0:4:12.01:0,12,128	1/1:5,20:25:63.14:699,63,0	0/0:4,0:4:2.97:0,3,75	1/1:0,8:8:24:240,24,0	1/1:0,4:4:11.97:125,12,0	0/0:3,0:3:9.03:0,9,121	0/0:2,0:2:6:0,6,63	0/0:7,0:7:15.05:0,15,194	1/1:0,7:7:6.02:72,6,0	1/1:0,8:8:15.05:179,15,0	1/1:0,21:21:54.11:627,54,0	1/1:0,21:21:48.15:572,48,0	1/1:5,14:19:42.09:471,42,0	1/1:1,5:6:18.05:205,18,0	1/1:3,1:4:8.88:76,9,0	1/1:0,6:6:17.93:180,18,0	0/0:4,0:4:9.02:0,9,106	0/0:2,0:2:5.99:0,6,48	1/1:5,10:15:42.07:465,42,0	1/1:1,12:13:36.03:392,36,0	1/1:1,3:4:12.02:131,12,0	1/1:1,14:15:45.12:523,45,0
chr10	40289251	.	TGAACC	T	18819.51	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=7.326;DP=537;FS=8.917;HRun=0;HaplotypeScore=129.5059;InbreedingCoeff=0.9303;MQ=78.73;MQ0=0;MQRankSum=-7.999;QD=43.77;ReadPosRankSum=4.556;VQSLOD=4.7804;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,27:29:51.18:1056,51,0	1/1:1,2:3:6.02:124,6,0	0/0:19,0:17:38.43:0,38,1002	0/0:29,0:22:7.39:0,7,995	1/1:2,22:24:30.10:621,30,0	1/1:1,20:21:42.14:846,42,0	1/1:4,18:22:45.15:919,45,0	1/1:2,24:26:66.15:1152,66,0	1/1:0,22:22:60.21:1243,60,0	1/1:2,16:18:51.16:985,51,0	1/1:3,8:11:12.04:248,12,0	0/0:21,0:21:54.19:0,54,1596	1/1:4,19:23:54.19:1117,54,0	1/1:3,22:26:72.25:1491,72,0	1/1:2,18:20:51.18:1050,51,0	1/1:5,19:24:57.20:1180,57,0	1/1:3,18:21:45.15:932,45,0	1/1:2,9:11:18.06:367,18,0	1/1:0,18:18:51.12:922,51,0	1/1:1,12:13:24.08:497,24,0	1/1:4,16:20:14.35:309,14,0	1/1:2,20:22:36.12:745,36,0	0/0:9,0:9:27.08:0,27,683	0/0:29,0:29:66.23:0,66,1924	1/1:1,11:12:27.09:559,27,0	1/1:1,22:23:66.20:1276,66,0	1/1:1,17:18:48.16:994,48,0	1/1:0,3:3:9.03:186,9,0
chr10	40289327	.	CTG	C	4284.15	PASS	AB=0.879;AC=49;AF=0.875;AN=56;BaseQRankSum=-1.324;DP=519;FS=3.256;HRun=0;HaplotypeScore=125.0023;InbreedingCoeff=0.2736;MQ=43.08;MQ0=24;MQRankSum=1.862;QD=9.12;ReadPosRankSum=-1.020;VQSLOD=4.4488;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:35,0:36:45.47:213,45,0	1/1:8,1:8:12.03:134,12,0	0/0:21,0:2:2.50:0,2,9	0/0:28,0:10:9.09:0,9,103	1/1:10,16:24:45.28:455,45,0	1/1:19,0:20:14.40:84,14,0	1/1:11,0:15:2.84:15,3,0	1/1:14,0:21:19.74:98,20,0	1/1:14,0:15:25.73:147,26,0	1/1:21,1:22:38.92:417,39,0	1/1:7,6:11:6.49:66,6,0	1/1:23,1:24:7.67:286,8,0	1/1:12,0:17:19.89:104,20,0	1/1:12,0:17:11.83:57,12,0	1/1:9,10:18:22:241,22,0	1/1:10,7:17:32.68:355,33,0	1/1:4,18:22:8.93:102,9,0	1/1:10,4:14:20.39:221,20,0	0/1:13,0:9:10.47:19,0,10	0/1:8,0:10:7.79:20,0,8	1/1:12,0:11:8.44:47,8,0	1/1:25,4:27:1.07:449,1,0	1/1:12,1:12:6.26:61,6,0	1/1:18,3:21:35.80:387,36,0	1/1:12,0:10:19.47:96,19,0	0/1:14,0:17:9.73:96,0,10	1/1:10,0:10:14.20:70,14,0	1/1:14,0:12:8.52:42,9,0
chr10	40289329	.	G	GTC	243.45	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=3.182;DP=473;FS=2.131;HRun=0;HaplotypeScore=133.8751;InbreedingCoeff=-0.0906;MQ=44.67;MQ0=25;MQRankSum=0.771;QD=1.04;ReadPosRankSum=-5.819;VQSLOD=0.0973;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:34:65.25:0,65,410	0/1:7,0:6:26.87:27,0,43	0/0:27,0:2:1.25:0,1,3	0/0:33,0:10:8.50:0,9,109	0/1:23,0:22:38.21:86,0,38	0/1:16,0:15:6.59:7,0,30	0/1:18,0:15:5.78:30,0,6	0/0:22,0:20:27.33:0,27,239	0/0:16,0:15:1.16:0,1,68	0/0:21,0:21:14.27:0,14,238	1/1:12,0:10:5.60:27,6,0	0/1:19,0:19:28.10:28,0,70	0/1:15,0:15:0.93:1,0,53	0/0:14,0:14:9.46:0,9,45	0/1:15,0:14:6.59:7,0,52	0/0:17,0:17:10.60:0,11,136	0/1:19,0:19:4.47:4,0,21	0/1:13,0:12:22.67:23,0,56	0/0:11,0:8:17.91:0,18,112	0/0:12,0:11:5.84:0,6,41	0/0:10,0:9:9.87:0,10,54	0/1:23,0:22:26.38:26,0,148	1/1:9,5:14:5.81:70,6,0	0/1:18,0:18:50.21:50,0,90	0/1:13,0:11:0.97:1,0,91	0/0:11,0:11:15.49:0,15,120	0/1:8,0:8:2.28:2,0,70	0/0:9,0:7:11.81:0,12,75
chr10	40291709	.	A	AC	4517.98	PASS	AB=0.984;AC=50;AF=0.893;AN=56;BaseQRankSum=1.374;DP=507;FS=128.250;HRun=0;HaplotypeScore=103.0498;InbreedingCoeff=0.1584;MQ=55.28;MQ0=19;MQRankSum=2.108;QD=9.37;ReadPosRankSum=3.150;VQSLOD=1.8530;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:31,0:29:44.05:305,44,0	1/1:10,0:10:17.95:114,18,0	0/1:19,0:7:17.49:26,0,17	0/0:25,0:8:14.13:0,14,112	1/1:26,0:26:16.38:234,16,0	1/1:16,0:15:25.94:177,26,0	1/1:16,0:15:38.70:185,39,0	1/1:19,1:16:33.46:210,33,0	1/1:14,0:13:1.79:139,2,0	1/1:13,0:13:28.94:140,29,0	1/1:18,0:19:48.60:270,49,0	1/1:4,7:11:15.54:116,16,0	1/1:21,0:19:39.64:236,40,0	0/1:16,0:15:37.62:96,0,38	1/1:21,0:21:41.24:253,41,0	1/1:18,0:17:28.27:179,28,0	1/1:29,0:29:1.69:239,2,0	0/1:21,0:20:8.67:100,0,9	1/1:17,2:16:2.08:87,2,0	1/1:15,1:15:17.85:145,18,0	1/1:20,1:21:31.12:218,31,0	1/1:14,0:14:28.63:187,29,0	1/1:4,12:17:11.22:109,11,0	1/1:15,2:18:41.67:259,42,0	1/1:7,0:7:18.91:96,19,0	1/1:22,0:21:46.46:285,46,0	0/1:14,0:14:32.50:57,0,33	1/1:8,0:8:13.31:55,13,0
chr10	40292535	.	T	TGGGGTG	2287.74	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-2.740;DP=523;FS=4.771;HRun=0;HaplotypeScore=107.5954;InbreedingCoeff=0.9317;MQ=74.97;MQ0=0;MQRankSum=-7.896;QD=44.86;ReadPosRankSum=-3.955;VQSLOD=2.4164;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:54.15:0,54,1056	0/0:7,0:7:21.07:0,21,448	0/0:22,0:21:3.12:0,3,352	0/0:13,0:12:14.06:0,14,222	0/0:29,0:29:72.25:0,72,1533	1/1:2,6:9:18.06:597,18,0	1/1:9,6:16:19.31:599,19,0	0/0:33,0:33:38.80:0,39,734	1/1:1,6:8:15.05:497,15,0	0/0:22,0:22:51.15:0,51,1011	0/0:28,0:28:72.25:0,72,1530	0/0:15,0:15:39.13:0,39,832	1/1:8,0:10:19.62:507,20,0	1/1:6,1:8:9.03:256,9,0	0/0:16,0:16:33.10:0,33,664	0/0:16,0:16:33.11:0,33,704	0/0:26,0:26:72.25:0,72,1534	0/0:8,0:8:18.06:0,18,384	0/0:16,0:16:42.14:0,42,896	0/0:29,0:29:75.22:0,75,1520	0/0:16,0:16:39.13:0,39,832	0/0:15,0:15:33.10:0,33,664	0/0:32,0:32:75.26:0,75,1599	0/0:18,0:18:36.12:0,36,752	0/0:17,0:17:39.11:0,39,790	0/0:18,0:18:42.14:0,42,896	0/0:33,0:33:75.26:0,75,1599	0/0:18,0:18:42.14:0,42,896
chr10	40292823	.	T	TC	17400.90	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-14.476;DP=633;FS=1.049;HRun=0;HaplotypeScore=53.2914;InbreedingCoeff=0.9911;MQ=65.79;MQ0=6;MQRankSum=-1.836;QD=39.37;ReadPosRankSum=3.472;VQSLOD=5.0685;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,32:33:78.26:1191,78,0	1/1:0,17:17:47.99:677,48,0	0/0:17,0:12:29.23:0,29,375	0/0:15,0:10:21.10:0,21,297	1/1:1,34:35:99:1486,99,0	0/0:19,0:19:57.19:0,57,796	0/0:17,0:17:51.17:0,51,713	1/1:3,30:32:86.86:1209,87,0	0/0:17,0:17:51.17:0,51,711	1/1:0,27:27:80.94:1203,81,0	1/1:0,26:26:72.24:1102,72,0	0/0:18,0:17:51.08:0,51,616	0/0:21,0:21:63.20:0,63,856	0/0:16,0:16:48.10:0,48,632	1/1:0,26:26:72.24:1102,72,0	1/1:1,22:23:54.18:826,54,0	1/1:0,23:23:57.19:872,57,0	1/1:0,19:19:48.16:734,48,0	1/1:1,15:14:42.13:621,42,0	1/1:0,28:28:75.12:1091,75,0	1/1:0,13:13:36.12:551,36,0	1/1:0,24:24:69.15:1025,69,0	0/0:23,0:23:69.21:0,69,927	0/0:28,0:28:78.19:0,78,1019	1/1:0,27:27:78.26:1191,78,0	1/1:0,30:30:90.23:1286,90,0	1/1:0,29:29:69.23:1056,69,0	1/1:1,12:13:9.30:179,9,0
chr10	40293321	.	T	TG	19136.82	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-10.172;DP=616;FS=2.011;HRun=0;HaplotypeScore=56.8535;InbreedingCoeff=0.9971;MQ=69.05;MQ0=1;MQRankSum=-4.481;QD=36.45;ReadPosRankSum=1.621;VQSLOD=4.7186;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,42:42:81.27:1182,81,0	1/1:0,7:7:18.06:262,18,0	0/0:12,0:11:28.64:0,29,365	0/0:14,0:14:30.93:0,31,361	1/1:0,28:28:72.08:991,72,0	1/1:0,14:14:24.08:351,24,0	1/1:0,31:31:75.25:1094,75,0	1/1:0,25:25:72.21:1012,72,0	1/1:0,21:21:51.17:744,51,0	1/1:0,31:31:90.23:1234,90,0	1/1:0,15:15:45.07:631,45,0	0/0:26,0:26:78.19:0,78,1016	1/1:1,18:19:45.10:656,45,0	1/1:0,23:23:54.10:782,54,0	1/1:0,21:21:57.19:832,57,0	1/1:0,27:27:63.21:920,63,0	1/1:0,26:26:63.21:920,63,0	1/1:0,14:14:39.13:570,39,0	1/1:2,19:20:59.85:810,60,0	1/1:0,24:24:66.14:938,66,0	1/1:0,19:19:45.15:658,45,0	1/1:0,17:17:45.04:630,45,0	0/0:14,0:14:42.13:0,42,570	0/0:25,0:25:69.21:0,69,930	1/1:0,24:24:66.22:966,66,0	1/1:1,34:35:99:1422,102,0	1/1:1,31:32:78.26:1136,78,0	1/1:0,9:9:27.09:395,27,0
chr10	40294687	.	GA	G	5326.47	PASS	AB=0.786;AC=31;AF=0.554;AN=56;BaseQRankSum=6.757;DP=606;FS=1.151;HRun=12;HaplotypeScore=71.8811;InbreedingCoeff=0.7730;MQ=57.59;MQ0=14;MQRankSum=3.158;QD=15.09;ReadPosRankSum=4.397;VQSLOD=5.7085;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:31:40.10:0,40,232	1/1:4,5:8:14.81:116,15,0	0/0:10,1:8:17.80:0,18,158	0/1:9,0:5:2.99:3,0,18	1/1:2,18:21:43.86:331,44,0	1/1:1,15:16:35.86:279,36,0	0/1:4,15:18:15.89:257,0,16	0/0:28,1:26:38.48:0,38,529	1/1:4,11:15:29.88:232,30,0	1/1:10,18:26:47.74:371,48,0	1/1:2,16:18:24.15:303,24,0	1/1:3,17:20:53.71:412,54,0	0/0:13,2:14:35.96:0,36,335	0/0:16,0:15:28.84:0,29,269	1/1:1,22:22:56.78:441,57,0	1/1:3,15:18:44.80:348,45,0	1/1:7,36:42:94.52:722,95,0	1/1:6,27:30:62.67:485,63,0	0/0:19,2:21:1.56:0,2,359	0/0:32,0:31:65.94:0,66,639	0/0:14,1:14:6.79:0,7,236	1/1:5,11:15:26.88:209,27,0	1/1:5,12:17:32.44:254,32,0	1/1:5,25:30:71.69:556,72,0	0/0:22,1:23:18.62:0,19,367	0/0:28,0:31:65.44:0,65,632	0/0:25,0:25:69.09:0,69,684	0/1:14,2:16:7.50:8,0,266
chr10	40295113	.	TGATA	T	6779.74	PASS	AB=0.853;AC=29;AF=0.580;AN=50;BaseQRankSum=-1.520;DP=653;FS=0.505;HRun=0;HaplotypeScore=163.8533;InbreedingCoeff=0.7147;MQ=62.40;MQ0=6;MQRankSum=1.284;QD=17.38;ReadPosRankSum=3.143;VQSLOD=4.5615;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:41:57.18:0,57,975	0/0:10,0:13:9.02:0,9,129	./.	./.	1/1:16,12:28:33.02:419,33,0	0/0:5,0:26:15.05:0,15,278	0/0:0,0:16:6:0,6,73	./.	0/0:3,0:24:6.02:0,6,94	0/0:18,0:23:27.04:0,27,433	0/0:20,0:28:24.08:0,24,409	0/0:6,0:6:15.05:0,15,326	1/1:24,0:24:45.14:664,45,0	1/1:16,0:16:33.11:506,33,0	1/1:19,19:38:51.17:771,51,0	1/1:8,16:24:45.15:691,45,0	1/1:15,12:27:33.11:504,33,0	0/0:10,0:19:36.08:0,36,608	1/1:12,4:16:18.06:274,18,0	1/1:12,21:33:60.20:909,60,0	1/1:10,14:24:33.11:506,33,0	1/1:10,0:23:26.87:176,27,0	0/1:30,1:31:6.91:7,0,797	0/1:11,2:13:30.99:31,0,258	1/1:10,4:18:19.76:228,20,0	0/1:15,10:26:19.24:403,0,19	1/1:10,14:24:30.10:460,30,0	1/1:15,10:25:15.05:230,15,0
chr10	40295116	.	TA	T	196.42	PASS	AB=0.658;AC=2;AF=0.036;AN=56;BaseQRankSum=3.299;DP=634;FS=0.706;HRun=1;HaplotypeScore=153.3915;InbreedingCoeff=-0.0447;MQ=62.25;MQ0=6;MQRankSum=0.315;QD=5.04;ReadPosRankSum=-2.279;VQSLOD=-0.5129;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:73.37:0,73,1140	0/0:12,0:12:27.08:0,27,378	0/0:19,0:13:38.92:0,39,542	0/0:12,0:10:26.30:0,26,360	0/0:27,0:27:36.39:0,36,636	0/0:23,0:23:20.72:0,21,189	0/0:17,0:16:8.86:0,9,59	0/0:30,0:28:81.20:0,81,1148	0/0:22,0:22:5.93:0,6,59	0/0:23,0:23:69.18:0,69,973	0/0:28,0:28:66.18:0,66,855	0/0:6,0:6:18.06:0,18,285	0/1:12,11:23:91.21:161,0,91	0/1:7,9:16:48.41:124,0,48	0/0:36,0:36:59.80:0,60,711	0/0:22,0:22:29.70:0,30,298	0/0:25,0:25:37.30:0,37,468	0/0:20,0:19:57.11:0,57,681	0/0:16,0:16:31.39:0,31,415	0/0:33,0:33:50:0,50,536	0/0:23,0:23:36.84:0,37,429	0/0:23,0:23:13.18:0,13,356	0/0:29,0:29:79.12:0,79,1165	0/0:14,0:14:27.93:0,28,394	0/0:18,0:18:31.19:0,31,434	0/0:26,0:26:59.12:0,59,731	0/0:24,0:24:38.94:0,39,450	0/0:25,0:25:49.58:0,50,685
chr10	40295118	.	GATA	G	723.01	PASS	AB=0.933;AC=10;AF=0.179;AN=56;BaseQRankSum=12.959;DP=626;FS=0.732;HRun=0;HaplotypeScore=168.1779;InbreedingCoeff=-0.2426;MQ=61.38;MQ0=6;MQRankSum=-1.126;QD=2.96;ReadPosRankSum=4.674;VQSLOD=2.4271;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,99,1627	0/0:12,0:12:27.08:0,27,395	0/0:15,0:10:30.08:0,30,372	0/0:12,0:10:26.76:0,27,317	0/0:27,0:27:20.66:0,21,515	0/0:21,0:21:21.07:0,21,475	0/0:16,0:15:9.03:0,9,174	0/0:29,0:27:81.25:0,81,1025	0/0:22,0:22:6.02:0,6,135	0/0:23,0:23:69.23:0,69,1133	0/0:28,0:28:66.22:0,66,995	0/0:7,0:7:21.07:0,21,447	0/1:13,11:24:74.29:322,0,74	0/1:7,9:16:32.75:268,0,33	0/1:36,0:36:31.20:31,0,492	0/1:22,0:22:55:55,0,182	0/1:25,0:25:21.32:21,0,334	0/0:19,0:18:54.18:0,54,928	0/0:17,0:17:3.03:0,3,350	0/1:33,0:33:57.58:58,0,342	0/1:25,0:25:23.41:23,0,333	0/1:23,0:23:47.45:47,0,251	0/0:28,0:28:73.39:0,73,1425	0/0:13,0:13:19.22:0,19,445	0/1:17,0:17:18.38:18,0,307	0/0:25,0:25:4.14:0,4,541	0/1:23,0:23:21.55:22,0,301	0/0:25,0:25:20.81:0,21,547
chr10	40295463	.	CTT	C	8121.34	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=11.954;DP=646;FS=8.288;HRun=2;HaplotypeScore=88.0627;InbreedingCoeff=0.9947;MQ=91.88;MQ0=0;MQRankSum=-7.480;QD=44.38;ReadPosRankSum=4.966;VQSLOD=4.1637;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,117,2337	1/1:0,7:7:12.04:195,12,0	0/0:24,0:24:72.20:0,72,1339	0/0:31,0:31:81.28:0,81,1569	1/1:0,22:22:60.20:977,60,0	0/0:30,0:30:90.29:0,90,1758	0/0:21,0:21:63.19:0,63,1185	0/0:41,0:41:99:0,120,2368	0/0:22,0:22:66.23:0,66,1339	1/1:0,21:21:63.19:996,63,0	1/1:0,20:20:48.15:778,48,0	0/0:16,0:16:48.15:0,48,928	0/0:18,0:18:54.17:0,54,1054	0/0:27,0:27:81.26:0,81,1587	1/1:0,27:27:78.27:1270,78,0	1/1:0,15:15:42.14:684,42,0	1/1:0,35:35:96.33:1563,96,0	1/1:0,20:20:54.18:878,54,0	0/0:21,0:21:63.22:0,63,1227	0/0:32,0:32:93.31:0,93,1818	0/0:25,0:25:75.24:0,75,1467	1/1:0,16:16:48.16:779,48,0	0/0:20,0:20:60.16:0,60,1092	0/0:25,1:26:29.87:0,30,1462	0/0:25,0:25:75.23:0,75,1452	0/0:13,0:13:39.10:0,39,751	0/0:24,0:23:72.24:0,72,1413	0/0:8,0:8:24.02:0,24,409
chr10	40296340	.	TACACAC	T	201.67	PASS	AB=1.000;AC=11;AF=0.204;AN=54;BaseQRankSum=1.286;DP=427;FS=4.857;HRun=0;HaplotypeScore=112.5410;InbreedingCoeff=0.4043;MQ=48.17;MQ0=9;MQRankSum=-2.230;QD=2.08;ReadPosRankSum=-0.564;VQSLOD=1.9212;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:17,9:25:17.98:288,18,0	0/0:8,0:8:3.01:0,3,91	0/0:19,0:10:3:0,3,67	0/0:19,0:11:2.04:0,2,6	0/0:12,0:11:0:0,0,0	0/0:28,0:28:21.53:0,22,548	0/0:24,0:24:15.05:0,15,420	0/0:13,0:12:21.07:0,21,600	0/0:13,0:13:3.12:0,3,47	0/0:20,0:20:43.03:0,43,1165	1/1:14,0:14:0.45:1,0,0	0/0:18,0:17:2.59:0,3,15	0/0:17,0:16:9.03:0,9,239	0/0:14,0:13:9.50:0,10,265	0/1:14,0:14:0:0,0,0	0/0:13,0:13:3:0,3,66	0/0:25,0:22:5.91:0,6,103	0/0:11,0:9:9.50:0,10,254	0/0:9,0:7:8.06:0,8,123	0/0:11,0:10:2.99:0,3,24	1/1:20,0:19:0.47:1,0,0	./.	1/1:10,0:9:0.47:1,0,0	0/0:10,0:14:6.02:0,6,142	1/1:13,0:12:0.47:1,0,0	0/0:16,0:16:27.09:0,27,769	0/0:18,0:17:14.98:0,15,376	0/0:3,0:3:3.01:0,3,96
chr10	40296664	.	C	CAT	30601.93	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-14.309;DP=706;FS=7.822;HRun=0;HaplotypeScore=73.9821;InbreedingCoeff=0.9976;MQ=91.22;MQ0=0;MQRankSum=-9.364;QD=53.97;ReadPosRankSum=5.974;VQSLOD=4.9606;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,44:46:99:2375,117,0	1/1:0,7:7:18.06:364,18,0	0/0:30,0:29:75.30:0,75,1198	0/0:29,0:29:87.17:0,87,1331	1/1:0,17:18:44.66:912,45,0	1/1:0,17:17:51.18:1036,51,0	1/1:0,29:29:81.28:1643,81,0	1/1:0,30:31:93.28:1772,93,0	1/1:1,29:31:84.29:1706,84,0	1/1:0,24:25:75.25:1488,75,0	1/1:1,17:18:45.15:912,45,0	0/0:28,0:28:81.23:0,81,1230	1/1:0,21:21:57.20:1150,57,0	1/1:1,27:28:69.24:1401,69,0	1/1:0,28:28:78.27:1584,78,0	1/1:0,27:28:72.25:1462,72,0	1/1:1,30:32:75.26:1523,75,0	1/1:0,17:17:45.15:914,45,0	1/1:1,24:25:72.25:1456,72,0	1/1:0,15:15:45.15:912,45,0	1/1:0,47:48:99:2497,123,0	1/1:0,26:27:66.23:1329,66,0	0/0:17,0:17:45.12:0,45,676	0/0:35,0:34:99:0,102,1632	1/1:0,21:21:51.17:1035,51,0	1/1:0,19:19:54.17:1060,54,0	1/1:1,27:28:78.27:1582,78,0	1/1:0,8:8:24.08:487,24,0
chr10	40297342	.	AT	A	18931.55	PASS	AB=0.900;AC=55;AF=0.982;AN=56;BaseQRankSum=-1.246;DP=616;FS=2.968;HRun=3;HaplotypeScore=183.1745;InbreedingCoeff=-0.0200;MQ=72.44;MQ0=0;MQRankSum=-4.598;QD=30.73;ReadPosRankSum=2.929;VQSLOD=4.0247;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,43:47:99:1497,126,0	1/1:0,9:9:27.04:317,27,0	1/1:11,10:21:15.34:396,15,0	0/1:16,2:18:65.68:91,0,66	1/1:2,28:30:83.86:883,84,0	1/1:2,25:27:75.17:908,75,0	1/1:5,18:23:54.05:619,54,0	1/1:4,33:37:99:1193,102,0	1/1:0,25:25:72.16:871,72,0	1/1:4,17:21:57.16:674,57,0	1/1:3,16:19:50.77:503,51,0	1/1:0,22:22:63.13:760,63,0	1/1:1,28:29:78.25:964,78,0	1/1:1,8:9:27:314,27,0	1/1:1,27:28:84.18:1007,84,0	1/1:0,20:20:60.19:742,60,0	1/1:1,23:24:63.16:761,63,0	1/1:0,9:9:24.08:297,24,0	1/1:2,21:23:66.21:817,66,0	1/1:0,28:28:83.96:926,84,0	1/1:2,14:15:29.83:286,30,0	1/1:2,17:19:51.07:584,51,0	1/1:1,26:27:68.86:853,69,0	1/1:4,14:17:33.01:376,33,0	1/1:1,12:13:36.06:415,36,0	1/1:2,23:25:72.22:878,72,0	1/1:0,24:24:69.22:853,69,0	1/1:1,4:5:12.04:149,12,0
chr10	40297531	.	C	CA	17658.09	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-1.273;DP=768;FS=6.732;HRun=4;HaplotypeScore=104.3401;InbreedingCoeff=0.9998;MQ=77.81;MQ0=0;MQRankSum=-2.905;QD=36.94;ReadPosRankSum=1.456;VQSLOD=3.9884;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,37:39:99:1436,105,0	1/1:0,12:12:36.12:492,36,0	0/0:40,0:38:99:0,102,1131	0/0:20,0:20:57.12:0,57,630	1/1:0,15:15:42.14:574,42,0	0/0:22,0:22:63.18:0,63,714	0/0:17,0:17:45.11:0,45,501	1/1:2,36:38:99:1459,108,0	0/0:43,0:43:99:0,129,1463	1/1:4,25:29:75.23:1004,75,0	1/1:1,11:12:30.10:410,30,0	0/0:33,0:33:93.26:0,93,1055	0/0:29,0:29:81.23:0,81,915	0/0:25,0:25:60.15:0,60,669	1/1:0,34:34:93.31:1272,93,0	1/1:1,23:24:66.22:902,66,0	1/1:0,35:35:99:1395,102,0	1/1:0,27:27:78.26:1063,78,0	1/1:1,13:14:39.12:517,39,0	1/1:0,25:25:72.23:973,72,0	1/1:5,51:56:99:2011,147,0	1/1:1,24:25:69.23:944,69,0	0/0:25,0:25:69.18:0,69,772	0/0:35,0:35:96.27:0,96,1089	1/1:1,15:15:33.11:451,33,0	1/1:2,31:33:87.24:1136,87,0	1/1:3,30:33:90.26:1209,90,0	1/1:0,11:11:30.10:410,30,0
chr10	40297701	.	TACA	T	5889.28	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-0.825;DP=771;FS=1.189;HRun=0;HaplotypeScore=164.6451;InbreedingCoeff=0.9966;MQ=81.94;MQ0=0;MQRankSum=-0.260;QD=41.77;ReadPosRankSum=2.876;VQSLOD=6.2067;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,154,3383	0/0:7,0:7:18.03:0,18,360	0/0:26,0:26:59.38:0,59,1279	0/0:22,0:22:48.39:0,48,916	0/0:24,0:24:54.19:0,54,1212	1/1:0,20:20:54.18:899,54,0	1/1:0,26:25:60.21:999,60,0	0/0:33,0:33:90.29:0,90,1869	1/1:3,38:41:99:1645,99,0	0/0:26,0:26:75.25:0,75,1606	0/0:15,0:15:30.02:0,30,583	0/0:36,0:36:99:0,105,2266	1/1:0,25:25:66.23:1098,66,0	1/1:0,29:29:75.73:1249,76,0	0/0:43,0:43:99:0,123,2770	0/0:26,0:26:72.24:0,72,1590	0/0:57,0:57:99:0,166,3634	0/0:26,0:26:69.15:0,69,1384	0/0:15,0:15:42.13:0,42,910	0/0:17,0:17:45.07:0,45,887	0/0:49,0:49:99:0,135,2939	0/0:20,0:20:54.16:0,54,1137	0/0:20,0:20:51.16:0,51,1053	0/0:39,0:39:99:0,112,2429	0/0:9,0:9:24.08:0,24,544	0/0:26,0:26:75.26:0,75,1655	0/0:32,0:33:81.21:0,81,1729	0/0:7,0:7:21.07:0,21,476
chr10	40297913	.	G	GA	722.49	PASS	AB=0.983;AC=15;AF=0.278;AN=54;BaseQRankSum=0.421;DP=414;FS=3.740;HRun=9;HaplotypeScore=132.4359;InbreedingCoeff=0.5261;MQ=45.69;MQ0=15;MQRankSum=-1.064;QD=3.78;ReadPosRankSum=-3.531;VQSLOD=-0.0723;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:11:2.30:0,2,8	0/0:8,0:8:8.69:0,9,50	0/1:30,1:5:20.41:20,0,31	0/1:33,0:6:1.22:37,0,1	0/1:17,0:15:7.14:14,0,7	1/1:9,8:16:11.05:187,11,0	1/1:12,4:14:13.66:110,14,0	0/0:19,0:15:10.73:0,11,52	1/1:10,8:16:8.48:60,8,0	0/0:15,0:15:10.20:0,10,46	0/0:9,0:9:5.60:0,6,30	0/0:12,0:12:17.78:0,18,137	1/1:14,2:17:27.24:218,27,0	1/1:11,6:16:28.79:236,29,0	0/0:11,0:10:2.49:0,2,16	0/0:17,0:17:5.27:0,5,30	0/0:4,0:4:8.50:0,8,49	0/1:9,0:9:0:0,0,0	0/0:7,0:7:7.82:0,8,43	0/0:14,0:13:2.58:0,3,10	./.	0/1:12,0:12:0:0,0,0	0/0:13,0:12:22.64:0,23,172	0/0:11,0:11:11.94:0,12,96	0/0:19,0:16:19.33:0,19,92	0/0:24,0:24:22.74:0,23,108	0/0:18,0:19:10.73:0,11,61	0/0:3,0:3:5.55:0,6,26
chr10	40297922	.	AGACCT	A	3494.31	PASS	AB=0.957;AC=42;AF=0.778;AN=54;BaseQRankSum=-1.068;DP=372;FS=12.610;HRun=0;HaplotypeScore=109.4519;InbreedingCoeff=-0.1431;MQ=46.36;MQ0=23;MQRankSum=-2.439;QD=10.62;ReadPosRankSum=-0.191;VQSLOD=2.0809;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:10,0:9:13.81:22,0,14	1/1:7,0:7:14.96:146,15,0	0/1:42,0:6:36.14:36,0,118	0/0:40,0:7:15.02:0,15,213	1/1:12,1:11:11.64:213,12,0	0/1:14,1:14:34.17:34,0,153	0/1:12,0:11:51.78:52,0,122	1/1:12,1:9:17.22:123,17,0	0/1:13,1:12:49.07:82,0,49	1/1:12,0:10:15.01:286,15,0	1/1:9,2:11:5.94:178,6,0	0/1:9,0:9:5.23:5,0,58	0/1:11,2:13:28.98:131,0,29	0/1:14,1:13:66.79:131,0,67	1/1:9,0:6:6.46:86,6,0	0/1:13,0:13:23.41:282,0,23	1/1:5,8:13:2.57:243,3,0	1/1:1,5:5:3.01:62,3,0	1/1:7,1:7:6.63:135,7,0	1/1:10,0:9:16.54:151,17,0	./.	1/1:6,0:5:6.02:94,6,0	0/1:11,0:9:38.52:74,0,39	1/1:11,1:12:6.23:32,6,0	1/1:17,0:15:9.30:298,9,0	1/1:19,0:19:18.51:344,19,0	1/1:14,0:14:0.94:245,1,0	1/1:2,0:2:2.80:7,3,0
chr10	40297923	.	G	GA	1610.02	PASS	AB=0.958;AC=49;AF=0.907;AN=54;BaseQRankSum=-2.261;DP=382;FS=32.612;HRun=9;HaplotypeScore=104.6365;InbreedingCoeff=0.2408;MQ=45.88;MQ0=24;MQRankSum=-0.579;QD=4.78;ReadPosRankSum=-0.527;VQSLOD=-0.4981;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,1:10:12.54:37,13,0	0/1:6,1:7:12.23:12,0,24	0/1:45,0:6:0.09:0,0,90	0/0:41,0:7:5.16:0,5,94	1/1:13,0:11:13.24:79,13,0	1/1:7,8:14:31.90:265,32,0	1/1:8,4:11:24.32:139,24,0	1/1:14,1:11:16.58:99,17,0	1/1:12,3:12:4.22:48,4,0	1/1:12,0:10:5.35:37,5,0	1/1:11,0:11:1.71:34,2,0	1/1:9,0:9:8.50:57,9,0	1/1:11,2:13:8.40:134,8,0	1/1:13,2:13:16.61:115,17,0	1/1:10,0:7:3.97:26,4,0	1/1:12,1:13:5.84:61,6,0	1/1:13,0:13:5.46:56,5,0	1/1:6,0:5:0.47:1,0,0	0/1:8,0:7:1.32:46,0,1	1/1:8,2:9:18.91:89,19,0	./.	1/1:3,0:5:4.63:16,5,0	1/1:11,0:9:5.31:34,5,0	1/1:12,0:12:6.07:27,6,0	1/1:16,1:15:11.65:63,12,0	1/1:18,1:19:23.62:157,24,0	1/1:13,1:14:5.28:46,5,0	1/1:3,0:3:8.39:43,8,0
chr10	40297926	.	CTAAA	C	3133.84	PASS	AB=0.899;AC=37;AF=0.685;AN=54;BaseQRankSum=-0.663;DP=399;FS=1.942;HRun=0;HaplotypeScore=110.0974;InbreedingCoeff=0.2106;MQ=47.22;MQ0=25;MQRankSum=-1.057;QD=10.17;ReadPosRankSum=0.804;VQSLOD=3.0691;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:6,0:10:12.24:12,0,40	1/1:2,0:7:15.01:155,15,0	0/1:52,0:7:3.86:4,0,35	0/0:46,0:8:17.31:0,17,126	1/1:11,0:11:11.41:125,11,0	0/0:16,0:15:12.78:0,13,226	0/1:10,0:12:12.98:13,0,161	1/1:13,2:11:26.66:226,27,0	0/1:12,0:12:15.39:15,0,57	1/1:7,0:10:23.25:225,23,0	1/1:12,0:12:1.78:114,2,0	0/1:9,0:9:41.85:42,0,62	0/0:10,0:13:16.24:0,16,142	0/0:12,0:13:25.25:0,25,175	0/1:8,0:7:4.43:43,0,4	1/1:2,0:10:17.67:148,18,0	1/1:12,0:13:6.89:126,7,0	1/1:6,0:5:3:26,3,0	1/1:2,5:7:17.63:201,18,0	1/1:0,8:9:21.52:235,22,0	./.	1/1:5,0:5:5.97:51,6,0	0/1:14,0:12:87.82:88,0,112	0/1:16,0:17:56.23:56,0,80	1/1:0,13:14:30.10:480,30,0	1/1:1,17:19:50.49:577,50,0	1/1:1,11:14:24.06:316,24,0	0/1:4,0:4:7.96:30,0,8
chr10	40297940	.	A	AG	151.77	PASS	AB=0.921;AC=8;AF=0.143;AN=56;BaseQRankSum=1.212;DP=553;FS=10.390;HRun=0;HaplotypeScore=133.4299;InbreedingCoeff=-0.1746;MQ=48.11;MQ0=38;MQRankSum=-0.972;QD=0.62;ReadPosRankSum=3.020;VQSLOD=1.8242;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:13:35.23:0,35,298	0/0:7,0:7:13.72:0,14,92	0/1:63,0:8:15.63:16,0,23	0/1:68,0:16:19.41:19,0,56	0/0:25,0:21:49.49:0,49,323	0/1:13,9:21:21.21:68,0,21	0/1:12,9:20:13.44:13,0,55	0/0:21,0:20:1.59:0,2,179	0/1:20,0:18:64.05:87,0,64	0/0:21,0:20:19.42:0,19,232	0/0:17,0:17:47.59:0,48,349	0/0:15,0:15:35.78:0,36,224	0/1:17,0:17:43.85:44,0,148	0/1:16,0:14:30.53:31,0,89	0/0:12,0:10:23.31:0,23,157	0/0:14,0:15:38.06:0,38,266	0/0:15,0:15:26.06:0,26,155	0/0:8,0:7:11.94:0,12,90	0/0:19,0:16:30.06:0,30,202	0/0:18,0:16:34.53:0,35,247	0/0:3,0:2:5.99:0,6,50	0/0:8,0:7:17.74:0,18,115	0/0:14,0:12:28.60:0,29,186	0/0:22,0:21:15.66:0,16,122	0/1:17,0:15:2.27:2,0,64	0/0:28,0:28:27.65:0,28,372	0/0:21,0:19:33.59:0,34,224	0/0:3,0:3:8.47:0,8,55
chr10	40297945	.	A	AAG	2157.24	PASS	AB=0.930;AC=23;AF=0.411;AN=56;BaseQRankSum=0.745;DP=569;FS=11.176;HRun=0;HaplotypeScore=134.5929;InbreedingCoeff=0.5318;MQ=56.02;MQ0=38;MQRankSum=-1.325;QD=7.17;ReadPosRankSum=4.408;VQSLOD=2.4740;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:15:33.46:0,33,249	0/0:7,0:7:8.28:0,8,48	0/0:64,0:14:6.79:0,7,80	0/1:68,0:17:31.53:42,0,32	0/0:25,0:22:47.45:0,47,328	1/1:12,5:19:32.94:367,33,0	1/1:20,3:23:6.78:226,7,0	1/1:22,0:21:34.05:247,34,0	1/1:21,1:19:31.56:221,32,0	0/0:26,0:24:49.91:0,50,414	0/0:17,0:17:41.48:0,41,262	0/0:15,0:15:28.62:0,29,166	0/1:14,2:17:33.91:189,0,34	0/1:12,2:14:10.24:209,0,10	0/0:12,0:10:11.30:0,11,100	0/0:16,0:16:34.84:0,35,239	0/0:15,0:15:26.24:0,26,157	0/0:11,0:10:10.78:0,11,75	0/1:19,0:16:14.08:146,0,14	1/1:22,0:20:34.51:189,35,0	1/1:3,0:2:5.99:49,6,0	0/0:10,0:9:21.12:0,21,142	0/0:13,0:11:26.58:0,27,173	0/0:21,0:20:10.65:0,11,73	1/1:17,0:15:17.38:52,17,0	1/1:28,0:28:9.55:303,10,0	1/1:20,0:18:0.91:99,1,0	0/1:3,0:3:15.61:16,0,19
chr10	40298553	.	GGCAGGCA	G	19461.05	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=17.460;DP=537;FS=8.107;HRun=0;HaplotypeScore=170.1911;InbreedingCoeff=0.9827;MQ=77.10;MQ0=0;MQRankSum=-17.586;QD=61.78;ReadPosRankSum=0.270;VQSLOD=4.6247;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,25:30:66.23:1727,66,0	1/1:0,10:10:30.10:790,30,0	0/0:19,0:19:54.19:0,54,1881	0/0:17,0:17:45.15:0,45,1583	1/1:3,13:16:24.08:632,24,0	0/0:21,0:21:63.22:0,63,2452	0/0:41,0:41:99:0,123,4411	1/1:5,25:30:75.23:1868,75,0	0/0:23,0:23:66.21:0,66,2511	1/1:1,13:14:39.13:1027,39,0	1/1:0,8:8:21.07:553,21,0	0/0:24,0:24:72.24:0,72,2783	0/0:22,0:22:63.22:0,63,2507	0/0:18,0:18:54.19:0,54,2059	1/1:2,21:23:66.21:1682,66,0	1/1:2,20:22:63.20:1606,63,0	1/1:3,15:18:35.71:948,36,0	1/1:3,13:16:45.11:1126,45,0	1/1:3,7:10:21.07:521,21,0	1/1:1,13:14:30.10:790,30,0	1/1:5,17:22:31.46:793,31,0	1/1:4,11:15:36.07:767,36,0	0/0:12,0:12:33.11:0,33,1331	0/0:25,0:25:75.24:0,75,2792	1/1:2,15:17:51.17:1273,51,0	1/1:4,24:28:78.26:2002,78,0	1/1:5,15:20:51.16:1251,51,0	1/1:1,1:2:6:103,6,0
chr10	40298558	.	GCA	G	4983.83	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=18.133;DP=505;FS=11.615;HRun=0;HaplotypeScore=167.6742;InbreedingCoeff=0.9934;MQ=78.69;MQ0=0;MQRankSum=-18.110;QD=17.43;ReadPosRankSum=0.036;VQSLOD=3.9346;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:26,1:27:64.88:423,65,0	1/1:10,0:10:29.47:183,29,0	0/0:18,0:18:54.17:0,54,957	0/0:18,0:18:45.11:0,45,796	1/1:14,0:14:26.53:189,27,0	0/0:20,0:20:60.21:0,60,1216	0/0:38,0:38:99:0,114,2252	1/1:25,0:25:67.67:404,68,0	0/0:23,0:23:69.22:0,69,1366	1/1:14,1:15:44.38:342,44,0	1/1:8,0:8:20.59:123,21,0	0/0:25,0:25:75.26:0,75,1497	0/0:22,0:22:66.23:0,66,1325	0/0:18,0:18:54.19:0,54,1070	1/1:21,0:21:62.06:441,62,0	1/1:20,0:20:58.95:365,59,0	1/1:15,0:15:35.36:217,35,0	1/1:15,1:16:44.24:293,44,0	1/1:7,0:7:20.70:160,21,0	1/1:14,0:14:32.43:223,32,0	1/1:19,0:19:29.74:177,30,0	1/1:11,1:12:26.53:180,27,0	0/0:12,0:12:33.11:0,33,670	0/0:25,0:25:75.19:0,75,1442	1/1:17,1:18:50.21:365,50,0	1/1:26,0:26:76.49:484,76,0	1/1:15,0:14:44.10:263,44,0	1/1:1,3:4:11.97:154,12,0
chr10	40298610	.	G	GC	11501.46	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=1.550;DP=542;FS=6.746;HRun=2;HaplotypeScore=104.3721;InbreedingCoeff=0.9959;MQ=82.96;MQ0=0;MQRankSum=-9.743;QD=35.07;ReadPosRankSum=1.099;VQSLOD=4.6438;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,26:31:63.21:900,63,0	1/1:3,7:10:21.07:302,21,0	0/0:21,0:21:54.15:0,54,655	0/0:21,0:21:39.94:0,40,573	1/1:1,17:18:45.13:625,45,0	0/0:16,0:16:45.14:0,45,553	0/0:37,0:37:99:0,105,1271	1/1:1,26:27:78.23:1080,78,0	0/0:22,0:22:60.19:0,60,740	1/1:3,14:17:42.14:604,42,0	1/1:2,10:13:30.10:431,30,0	0/0:22,0:22:63.20:0,63,781	0/0:20,0:20:57.18:0,57,704	0/0:20,0:20:57.18:0,57,701	1/1:1,19:19:57.15:795,57,0	1/1:2,14:16:39.13:561,39,0	1/1:0,20:19:57.19:819,57,0	1/1:1,19:20:45.15:647,45,0	1/1:3,6:9:24.08:330,24,0	1/1:2,9:11:27.09:388,27,0	1/1:2,28:30:66.18:949,66,0	1/1:0,16:16:48.16:667,48,0	0/0:8,0:8:21.06:0,21,255	0/0:27,0:27:78.23:0,78,953	1/1:2,18:20:48.16:690,48,0	1/1:3,19:22:57.19:819,57,0	1/1:5,18:23:48.16:678,48,0	1/1:0,5:5:15.05:216,15,0
chr10	40299393	.	TA	T	308.72	PASS	AC=6;AF=0.333;AN=18;BaseQRankSum=1.850;DP=44;FS=0.000;HRun=9;HaplotypeScore=20.4912;MQ=50.42;MQ0=3;MQRankSum=1.737;QD=17.15;ReadPosRankSum=1.020;VQSLOD=2.2221;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:6,0:4:9.03:0,9,102	0/0:5,0:1:3.01:0,3,35	./.	1/1:2,4:6:12:110,12,0	1/1:0,6:6:18.01:165,18,0	./.	1/1:1,5:6:15.01:137,15,0	./.	./.	0/0:0,0:5:14.20:0,14,72	0/0:5,0:5:12.04:0,12,138	0/0:4,0:4:9.03:0,9,104	./.	./.	./.	./.	./.	./.	./.	./.	0/0:0,0:1:2.90:0,3,16	./.	./.	./.	./.	./.
chr10	40299433	.	A	AAAAT	675.51	PASS	AB=1.000;AC=12;AF=0.240;AN=50;BaseQRankSum=-5.612;DP=142;FS=24.507;HRun=0;HaplotypeScore=68.3800;InbreedingCoeff=0.4289;MQ=44.83;MQ0=0;MQRankSum=1.466;QD=17.32;ReadPosRankSum=-0.964;VQSLOD=1.0564;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:8,0:8:18.40:29,0,18	0/0:5,0:5:14.80:0,15,120	0/0:8,0:4:3.01:0,3,48	0/0:4,0:1:0:0,0,0	0/0:9,0:9:21.01:0,21,186	1/1:3,6:9:24.08:530,24,0	1/1:6,0:6:9.01:97,9,0	0/0:20,0:16:4.76:0,5,24	1/1:5,1:6:6.02:122,6,0	0/0:5,0:4:9:0,9,81	0/0:5,0:5:8.50:0,8,63	0/0:3,0:3:9.03:0,9,148	./.	1/1:2,0:2:3:25,3,0	0/1:3,0:3:8.59:9,0,45	0/0:1,0:1:3:0,3,27	0/0:6,0:6:8.24:0,8,62	0/0:3,0:3:9:0,9,81	1/1:5,0:5:0.89:2,1,0	0/0:4,0:4:11.97:0,12,96	./.	0/0:1,0:1:3:0,3,27	0/0:1,0:1:3.01:0,3,49	./.	0/0:8,0:7:6.41:0,6,126	0/0:6,0:6:14.90:0,15,119	0/0:7,0:7:17.73:0,18,137	0/0:5,0:5:11.99:0,12,102
chr10	40299442	.	AAATAAATAAAT	A	6523.33	PASS	AB=1.000;AC=35;AF=0.673;AN=52;BaseQRankSum=0.293;DP=134;FS=48.932;HRun=0;HaplotypeScore=62.7238;InbreedingCoeff=0.6743;MQ=45.54;MQ0=0;MQRankSum=-4.490;QD=65.23;ReadPosRankSum=3.528;VQSLOD=2.5696;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,5:8:15.05:410,15,0	1/1:0,5:5:15.05:501,15,0	0/0:8,0:4:4.91:0,5,316	0/1:4,0:1:0:0,0,0	1/1:0,9:9:24.08:777,24,0	0/0:9,0:9:9.93:0,10,949	0/0:4,0:4:8.51:0,9,275	1/1:11,4:13:6.02:199,6,0	0/0:4,0:4:9.49:0,9,286	1/1:1,4:4:9.03:301,9,0	1/1:1,4:5:9.03:300,9,0	0/0:4,0:4:12.04:0,12,600	0/0:1,0:1:3.01:0,3,82	0/0:3,0:3:6.02:0,6,195	1/1:0,3:3:9.03:298,9,0	1/1:0,1:1:3.01:100,3,0	1/1:2,4:6:10.64:374,11,0	1/1:0,3:3:9.03:301,9,0	1/1:4,1:5:3.01:100,3,0	1/1:0,4:4:12.04:398,12,0	./.	1/1:0,1:1:3.01:100,3,0	0/0:1,0:1:3.01:0,3,167	./.	1/1:1,7:8:24.08:790,24,0	1/1:2,4:6:15.05:497,15,0	1/1:0,7:7:21.07:676,21,0	1/1:0,5:5:12.04:400,12,0
chr10	40299453	.	T	TA	2329.84	PASS	AB=1.000;AC=39;AF=0.722;AN=54;BaseQRankSum=0.243;DP=198;FS=11.217;HRun=3;HaplotypeScore=73.1091;InbreedingCoeff=0.3416;MQ=53.35;MQ0=0;MQRankSum=-3.456;QD=13.39;ReadPosRankSum=-2.852;VQSLOD=0.9942;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,3:12:15.16:190,15,0	0/1:5,0:5:6.16:20,0,6	0/0:13,0:6:18.01:0,18,194	0/1:4,0:3:0.36:0,0,0	1/1:9,4:13:0.76:165,1,0	0/1:11,0:11:49.10:72,0,49	0/1:6,0:6:53.89:54,0,129	1/1:13,9:20:38.46:462,38,0	0/1:4,0:4:11.61:12,0,29	1/1:6,3:8:4.40:115,4,0	1/1:6,4:10:7.84:124,8,0	0/0:5,0:5:15.05:0,15,186	1/1:1,0:1:2.90:16,3,0	1/1:4,0:4:11.10:70,11,0	1/1:3,4:7:10.26:160,10,0	0/0:1,0:1:1.55:0,2,4	1/1:7,2:9:10:171,10,0	1/1:3,2:5:1.86:76,2,0	1/1:3,5:8:17.85:216,18,0	1/1:4,3:6:14.72:100,15,0	./.	1/1:2,1:3:0.85:37,1,0	0/0:4,0:4:9.01:0,9,98	0/0:1,0:1:3.01:0,3,37	1/1:8,1:8:20.76:138,21,0	1/1:7,2:8:10.03:60,10,0	1/1:8,1:9:16.78:168,17,0	1/1:6,1:7:9.97:60,10,0
chr10	40299469	.	C	CA	3869.72	PASS	AB=0.808;AC=36;AF=0.643;AN=56;BaseQRankSum=2.733;DP=255;FS=46.565;HRun=9;HaplotypeScore=77.4937;InbreedingCoeff=0.7989;MQ=64.05;MQ0=0;MQRankSum=-4.702;QD=19.64;ReadPosRankSum=0.033;VQSLOD=0.8956;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,8:11:25.62:269,26,0	1/1:0,7:7:21.06:232,21,0	0/0:15,0:8:9.58:0,10,62	0/1:6,0:4:0:0,0,0	1/1:2,16:18:22.09:471,22,0	0/0:0,0:9:16.30:0,16,47	0/0:0,0:5:10.19:0,10,30	1/1:4,1:19:45.84:251,46,0	0/0:0,0:3:4.07:0,4,12	1/1:1,16:16:45.12:498,45,0	1/1:2,12:14:13.05:372,13,0	0/0:8,0:8:20.99:0,21,182	0/0:0,0:3:4.07:0,4,12	0/0:0,0:5:8.62:0,9,24	0/1:3,5:8:4.91:177,0,5	1/1:0,4:4:12.03:133,12,0	1/1:0,10:10:24.06:265,24,0	1/1:1,4:7:10.94:140,11,0	1/1:0,1:12:34.26:189,34,0	1/1:2,0:9:19.89:97,20,0	1/1:2,0:2:5.83:38,6,0	1/1:1,5:6:15.04:166,15,0	0/0:5,0:5:15:0,15,130	0/0:4,0:4:12:0,12,104	1/1:2,2:11:34.38:207,34,0	1/1:3,1:12:28.16:137,28,0	1/1:1,1:10:25.73:145,26,0	1/1:1,0:9:17.04:84,17,0
chr10	40300205	.	AAACG	A	1168.42	PASS	AB=1.000;AC=12;AF=0.214;AN=56;BaseQRankSum=12.653;DP=630;FS=2.265;HRun=0;HaplotypeScore=138.0416;InbreedingCoeff=0.1512;MQ=65.14;MQ0=2;MQRankSum=-8.196;QD=5.01;ReadPosRankSum=5.176;VQSLOD=2.5086;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:38:97.56:0,98,2110	0/0:6,0:6:13.99:0,14,172	0/0:26,0:20:40.72:0,41,405	0/0:13,0:9:16.98:0,17,258	0/0:35,0:35:99:0,105,1959	0/0:19,0:19:56.92:0,57,1072	0/0:20,0:20:59.74:0,60,891	0/0:25,0:24:47.52:0,48,354	0/0:21,0:21:59.80:0,60,957	0/0:22,0:23:66.06:0,66,1147	0/0:18,0:18:45.56:0,46,606	0/1:30,0:30:51.38:51,0,208	1/1:0,18:18:24.08:459,24,0	1/1:1,15:16:15.05:289,15,0	0/0:33,0:33:95.95:0,96,1905	0/1:20,0:20:51.96:264,0,52	0/0:32,0:32:95.91:0,96,1911	0/0:12,0:12:26.96:0,27,447	0/1:16,0:15:38.58:39,0,136	0/0:28,0:28:10.82:0,11,185	0/0:14,0:13:10.93:0,11,102	0/0:30,0:30:83.96:0,84,1557	0/1:32,0:32:44.32:44,0,167	0/1:26,0:26:2.35:2,0,157	0/1:21,0:21:47.03:47,0,136	0/1:23,0:23:40.07:40,0,238	0/1:31,0:31:91.80:92,0,113	0/0:4,0:4:11.71:0,12,71
chr10	40300208	.	CGAATGAATGAAT	C	6980.41	PASS	AB=0.657;AC=21;AF=0.375;AN=56;BaseQRankSum=6.475;DP=618;FS=0.000;HRun=0;HaplotypeScore=208.5051;InbreedingCoeff=0.8390;MQ=64.55;MQ0=2;MQRankSum=-6.207;QD=28.49;ReadPosRankSum=-1.544;VQSLOD=4.0580;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:81.19:0,81,4074	0/0:2,0:5:8.06:0,8,321	0/0:24,0:19:7.26:0,7,153	0/0:13,0:9:14.98:0,15,556	0/0:35,0:35:75.26:0,75,3937	0/0:19,0:19:42.13:0,42,2129	0/0:20,0:20:33.06:0,33,1544	1/1:16,8:23:23.78:361,24,0	0/0:20,0:20:39.13:0,39,1901	0/0:7,0:25:60.20:0,60,2721	0/0:6,0:19:45.05:0,45,1563	1/1:12,17:29:27.09:918,27,0	0/0:18,0:18:23.89:0,24,672	0/0:15,0:15:14.83:0,15,438	0/0:30,0:30:78.25:0,78,3989	0/0:5,0:18:42.13:0,42,998	0/0:32,0:32:63.22:0,63,3566	0/0:5,0:13:21.07:0,21,1022	1/1:10,5:14:15.05:519,15,0	1/1:13,15:28:44.66:991,45,0	1/1:8,6:13:6.02:149,6,0	0/0:28,0:28:57.20:0,57,3007	1/1:13,19:32:36.12:1109,36,0	1/1:14,10:24:7.50:309,7,0	1/1:10,12:22:21.07:727,21,0	0/1:11,12:23:99:785,0,188	1/1:12,17:29:30.10:1039,30,0	1/1:5,0:5:3.01:73,3,0
chr10	40300353	.	AAGGC	A	719.71	PASS	AB=0.980;AC=20;AF=0.357;AN=56;BaseQRankSum=-3.345;DP=523;FS=0.000;HRun=0;HaplotypeScore=146.2242;InbreedingCoeff=-0.2870;MQ=47.80;MQ0=5;MQRankSum=-1.501;QD=2.17;ReadPosRankSum=2.528;VQSLOD=2.5843;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:21,0:21:25.56:26,0,107	0/1:12,0:12:9.41:9,0,40	1/1:35,0:15:0.47:1,0,0	0/0:40,0:18:8.31:0,8,48	0/1:27,0:26:23.08:23,0,227	0/0:17,0:16:32.84:0,33,274	0/0:24,0:22:21.72:0,22,283	0/1:10,0:9:1.05:81,0,1	0/0:13,0:13:29.87:0,30,276	0/1:26,0:25:17.57:18,0,207	1/1:8,0:8:5.60:37,6,0	0/0:27,0:27:57.03:0,57,888	0/0:13,0:12:21:0,21,206	0/0:15,0:15:17.99:0,18,165	0/1:35,0:35:99:159,0,278	0/1:18,0:18:28.68:29,0,181	0/1:18,0:18:56.90:57,0,60	0/1:18,0:18:49.42:49,0,84	0/1:12,0:11:23.14:23,0,138	0/1:6,5:11:28.01:28,0,41	0/1:23,0:23:17.33:112,0,17	0/1:18,0:18:34.52:35,0,38	0/0:14,0:14:12.04:0,12,289	0/0:24,0:24:48.02:0,48,789	0/1:14,0:14:57.13:57,0,129	0/1:14,0:14:76.33:76,0,118	0/1:11,0:11:48.83:57,0,49	0/0:5,0:5:5.06:0,5,71
chr10	40300377	.	C	CAGGA	4507.08	PASS	AB=1.000;AC=47;AF=0.839;AN=56;BaseQRankSum=6.050;DP=441;FS=6.256;HRun=0;HaplotypeScore=140.8335;InbreedingCoeff=0.7293;MQ=43.52;MQ0=4;MQRankSum=-3.448;QD=12.12;ReadPosRankSum=-2.403;VQSLOD=3.8205;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:15:7.49:201,7,0	1/1:9,0:9:13.98:112,14,0	0/0:16,0:4:5.95:0,6,42	0/1:19,0:7:0.84:1,0,19	1/1:20,0:19:37.79:343,38,0	1/1:14,0:13:18.02:224,18,0	1/1:19,0:17:10.17:103,10,0	1/1:15,0:14:17.48:140,17,0	1/1:13,0:13:5.37:142,5,0	1/1:14,0:13:18.42:200,18,0	1/1:3,0:3:3:25,3,0	0/0:22,0:22:29.98:0,30,386	1/1:10,0:9:8.99:109,9,0	1/1:9,6:15:4.04:44,4,0	1/1:34,0:34:57.97:540,58,0	1/1:19,0:19:28.97:252,29,0	1/1:23,0:23:42.86:310,43,0	1/1:15,0:14:22.21:230,22,0	1/1:16,0:15:26.77:317,27,0	1/1:9,0:9:8.96:81,9,0	1/1:33,0:33:42.57:303,43,0	1/1:8,0:8:11.93:103,12,0	0/0:7,0:7:18.03:0,18,249	0/0:24,0:24:53.95:0,54,626	1/1:13,0:13:21.05:238,21,0	1/1:15,0:15:18:183,18,0	1/1:16,0:16:23.32:202,23,0	1/1:5,0:5:9.01:106,9,0
chr10	40300394	.	A	AGGAG	1834.48	PASS	AB=1.000;AC=25;AF=0.446;AN=56;BaseQRankSum=2.163;DP=430;FS=12.478;HRun=0;HaplotypeScore=148.3195;InbreedingCoeff=-0.0197;MQ=52.49;MQ0=7;MQRankSum=-3.983;QD=6.79;ReadPosRankSum=5.773;VQSLOD=1.7585;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:18,0:18:39.67:40,0,93	0/1:8,0:8:7.54:8,0,31	0/0:24,0:11:27.03:0,27,279	0/0:19,0:9:23.92:0,24,239	0/1:19,0:19:68.11:70,0,68	1/1:9,2:10:24.06:415,24,0	1/1:16,0:14:21.01:328,21,0	0/0:16,0:14:14.70:0,15,140	1/1:10,1:11:1.06:310,1,0	0/1:13,0:12:54.51:55,0,77	0/0:2,0:2:4.24:0,4,28	0/0:16,0:16:33.02:0,33,417	1/1:3,5:8:6.02:128,6,0	1/1:14,1:15:13.43:168,13,0	0/1:34,0:34:99:118,0,156	0/1:18,0:18:14.80:15,0,78	0/1:24,0:24:6.05:6,0,85	0/1:15,0:14:50.06:50,0,80	0/1:17,0:16:67.11:118,0,67	1/1:4,0:4:2.40:17,2,0	0/0:38,0:38:14.01:0,14,226	0/1:7,0:7:14.44:15,0,14	0/0:7,0:7:21.06:0,21,327	0/0:21,0:21:45.10:0,45,736	0/1:11,0:11:32.35:95,0,32	0/1:11,0:11:33.64:34,0,65	0/0:17,0:17:22.36:0,22,157	0/1:9,0:9:23.33:23,0,36
chr10	40300396	.	G	GC	492.08	PASS	AB=0.840;AC=11;AF=0.196;AN=56;BaseQRankSum=7.621;DP=408;FS=4.598;HRun=0;HaplotypeScore=119.0207;InbreedingCoeff=-0.2469;MQ=56.43;MQ0=7;MQRankSum=-7.278;QD=2.95;ReadPosRankSum=-1.330;VQSLOD=2.9927;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:13,5:18:99:109,0,411	0/1:4,2:7:42.96:43,0,149	0/0:25,0:12:29.26:0,29,352	0/0:18,0:10:19.89:0,20,291	0/0:17,1:18:20.77:0,21,558	0/0:10,1:10:26.81:0,27,259	0/0:11,1:10:24.87:0,25,262	0/0:15,0:13:30.10:0,30,419	0/1:8,1:9:46.54:47,0,188	0/1:9,2:10:17.44:17,0,319	0/0:2,0:2:6.02:0,6,84	0/0:16,0:16:45.12:0,45,593	0/1:8,1:9:23.55:24,0,55	0/1:13,2:15:67.08:67,0,186	0/1:25,7:32:99:166,0,821	0/1:12,4:16:99:130,0,423	0/1:21,3:24:15.03:15,0,607	0/0:14,0:13:19.19:0,19,426	0/0:17,0:16:42.08:0,42,505	0/0:3,0:3:9.02:0,9,113	0/0:35,0:35:65.74:0,66,812	0/0:5,0:5:6.89:0,7,144	0/0:7,0:7:21.07:0,21,293	0/0:23,0:23:66.13:0,66,856	0/1:8,2:10:15.88:16,0,301	0/0:11,0:11:30.09:0,30,401	0/1:14,2:16:2.41:2,0,541	0/0:9,0:9:23.92:0,24,245
chr10	40301198	.	GC	G	13259.39	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=11.404;DP=592;FS=0.656;HRun=3;HaplotypeScore=59.8865;InbreedingCoeff=0.9998;MQ=73.33;MQ0=0;MQRankSum=-3.068;QD=34.62;ReadPosRankSum=3.612;VQSLOD=5.3641;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,29:30:84.26:1041,84,0	1/1:0,18:18:54.17:669,54,0	0/0:22,0:21:53.93:0,54,713	0/0:15,0:14:36.74:0,37,468	1/1:1,24:25:69.22:855,69,0	0/0:20,0:20:57.19:0,57,821	0/0:20,0:20:60.19:0,60,846	1/1:2,33:35:99:1225,99,0	0/0:20,0:20:60.20:0,60,864	1/1:1,23:24:69.22:854,69,0	1/1:0,21:21:60.19:743,60,0	0/0:21,0:21:63.18:0,63,865	0/0:24,0:24:69.21:0,69,973	0/0:26,0:26:78.26:0,78,1122	1/1:0,22:22:63.20:781,63,0	1/1:0,22:22:51.16:632,51,0	1/1:0,27:27:72.23:892,72,0	1/1:0,14:14:42.13:520,42,0	1/1:1,17:18:51.13:616,51,0	1/1:0,19:19:57.18:706,57,0	1/1:0,18:18:48.15:595,48,0	1/1:0,19:19:54.17:669,54,0	0/0:22,0:22:66.21:0,66,928	0/0:19,0:19:54.16:0,54,742	1/1:1,19:20:51.16:632,51,0	1/1:0,18:18:54.12:639,54,0	1/1:0,24:24:69.22:855,69,0	1/1:0,9:9:27.08:335,27,0
chr10	40302012	.	T	TG	1257.75	PASS	AB=0.954;AC=33;AF=0.688;AN=48;BaseQRankSum=4.459;DP=245;FS=0.000;HRun=9;HaplotypeScore=63.8495;InbreedingCoeff=0.5053;MQ=74.57;MQ0=0;MQRankSum=-7.112;QD=6.29;ReadPosRankSum=-2.373;VQSLOD=0.3445;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/1:16,0:12:4.73:5,0,134	0/0:9,0:8:15.84:0,16,84	0/1:10,1:11:13.56:39,0,14	0/1:4,0:4:0:0,0,0	1/1:16,0:16:21.24:89,21,0	1/1:5,0:5:5.62:27,6,0	0/1:3,0:3:0:0,0,0	0/1:12,1:13:0.72:38,0,1	1/1:3,1:4:5.82:33,6,0	0/0:17,0:17:32.77:0,33,277	1/1:7,0:7:8.29:37,8,0	1/1:12,0:12:20.94:100,21,0	1/1:11,1:12:22.62:163,23,0	1/1:8,5:13:24.63:200,25,0	1/1:15,6:21:36.46:279,36,0	1/1:11,6:17:15.82:215,16,0	./.	./.	1/1:12,0:12:8.09:39,8,0	0/1:4,1:5:0:0,0,0	0/0:9,0:9:17.94:0,18,147	0/0:6,0:6:5.56:0,6,51	1/1:4,0:4:2.94:25,3,0	1/1:6,0:6:3:25,3,0	1/1:16,0:15:17.98:88,18,0	0/1:2,0:2:0:0,0,0
chr10	40302015	.	G	GGGT	1346.40	PASS	AB=1.000;AC=15;AF=0.288;AN=52;BaseQRankSum=4.435;DP=237;FS=1.271;HRun=0;HaplotypeScore=68.1758;InbreedingCoeff=0.1955;MQ=74.56;MQ0=0;MQRankSum=-7.505;QD=10.77;ReadPosRankSum=1.378;VQSLOD=3.2195;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:18,0:12:29.66:0,30,375	0/0:9,0:8:6.28:0,6,174	0/0:11,0:11:4.34:0,4,29	0/0:3,2:5:1.96:0,2,13	1/1:9,7:16:37.57:520,38,0	0/1:5,0:5:18.07:21,0,18	1/1:3,0:3:2.99:24,3,0	0/0:11,0:11:7.12:0,7,106	0/0:3,0:3:6.45:0,6,48	0/0:16,0:16:48.08:0,48,672	1/1:1,6:7:12.04:235,12,0	1/1:6,5:11:32.90:470,33,0	0/1:11,0:11:11.71:40,0,12	0/1:13,0:13:34.39:34,0,99	0/1:21,0:21:9.08:89,0,9	0/1:18,0:18:19.68:20,0,48	0/0:1,0:1:3:0,3,28	0/0:3,0:3:0:0,0,0	0/0:12,0:12:14.50:0,14,85	0/1:5,0:5:2.65:3,0,19	0/0:9,0:9:27.06:0,27,373	0/0:4,0:4:8.65:0,9,126	0/0:4,0:4:8.34:0,8,56	0/0:4,0:4:9.35:0,9,70	0/1:15,0:14:46.54:47,0,54	0/0:1,0:1:3:0,3,25
chr10	40302022	.	T	TG	899.67	PASS	AB=1.000;AC=36;AF=0.720;AN=50;BaseQRankSum=5.409;DP=229;FS=0.000;HRun=9;HaplotypeScore=56.7471;InbreedingCoeff=0.6721;MQ=79.98;MQ0=0;MQRankSum=-6.208;QD=5.39;ReadPosRankSum=-0.570;VQSLOD=0.0238;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,0:2:0.47:1,0,0	./.	0/0:18,0:13:23.20:0,23,191	0/0:9,0:9:13.81:0,14,110	0/1:12,0:12:0.23:0,0,0	1/1:5,0:5:6.73:39,7,0	1/1:15,0:18:22.45:139,22,0	1/1:7,0:7:7.68:35,8,0	./.	1/1:5,0:5:9.33:45,9,0	1/1:2,0:2:2.88:15,3,0	0/0:20,0:20:19.15:0,19,321	1/1:4,2:6:8.98:78,9,0	1/1:2,8:10:18.03:186,18,0	1/1:10,0:10:13.88:62,14,0	1/1:12,0:12:16.70:79,17,0	1/1:21,0:21:34.01:163,34,0	1/1:16,0:16:27.26:121,27,0	1/1:3,0:3:4.15:19,4,0	0/1:3,0:3:0:0,0,0	0/1:11,0:11:0:0,0,0	1/1:6,0:6:0.47:1,0,0	0/0:7,0:7:17.97:0,18,156	0/0:5,0:5:11.59:0,12,105	0/1:3,0:3:0:0,0,0	1/1:3,0:3:0.89:2,1,0	1/1:12,0:11:15.71:66,16,0	./.
chr10	40302026	.	G	GGGC	3515.03	PASS	AB=1.000;AC=31;AF=0.596;AN=52;BaseQRankSum=1.979;DP=240;FS=2.911;HRun=0;HaplotypeScore=62.1145;InbreedingCoeff=0.6825;MQ=81.13;MQ0=0;MQRankSum=-5.907;QD=26.83;ReadPosRankSum=2.152;VQSLOD=3.7150;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,0:2:3.01:38,3,0	./.	0/0:20,0:14:29.97:0,30,384	0/0:10,0:9:16.26:0,16,220	1/1:2,7:10:5.51:28,6,0	1/1:6,0:6:6.44:40,6,0	0/0:17,0:17:17.42:0,17,162	1/1:1,7:10:22.35:259,22,0	0/0:3,0:3:5.99:0,6,49	1/1:2,4:6:13.24:196,13,0	1/1:2,1:3:2.97:49,3,0	0/0:21,0:21:57.07:0,57,786	0/0:7,0:7:2.61:0,3,53	0/1:9,0:9:13.89:31,0,14	1/1:1,5:6:17.80:329,18,0	1/1:3,8:11:10.07:337,10,0	1/1:3,17:20:41.19:764,41,0	1/1:2,15:17:36.12:723,36,0	1/1:4,0:4:11.99:142,12,0	1/1:4,0:4:5.91:53,6,0	0/0:9,5:14:8.86:0,9,57	1/1:0,1:5:2.97:20,3,0	0/0:7,0:7:21.06:0,21,317	0/0:5,0:5:11.93:0,12,197	0/0:1,4:5:2.50:0,2,9	1/1:0,4:4:11.90:146,12,0	1/1:10,4:13:12.84:360,13,0	./.
chr10	40303117	.	A	AC	2361.09	PASS	AB=0.759;AC=24;AF=0.480;AN=50;BaseQRankSum=-5.767;DP=412;FS=8.673;HRun=10;HaplotypeScore=81.6767;InbreedingCoeff=0.6514;MQ=89.55;MQ0=0;MQRankSum=-1.379;QD=10.98;ReadPosRankSum=-0.176;VQSLOD=2.4524;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:10,0:15:2.84:14,3,0	1/1:1,7:8:8.97:96,9,0	0/0:25,0:23:19.60:0,20,238	0/1:23,1:24:15.96:16,0,41	1/1:6,7:13:17.92:155,18,0	1/1:7,18:25:14.63:353,15,0	1/1:7,9:16:21.05:224,21,0	0/0:27,0:29:48.92:0,49,376	0/1:15,6:21:31.74:270,0,32	1/1:5,8:13:26.05:243,26,0	0/1:6,3:9:12.60:84,0,13	./.	0/0:8,0:8:23.95:0,24,192	0/0:11,0:11:29.92:0,30,237	1/1:3,16:19:23.84:250,24,0	1/1:4,10:14:5.59:235,6,0	0/1:2,10:12:0.58:200,0,1	1/1:2,14:16:30.07:318,30,0	0/0:10,0:10:23.97:0,24,197	0/0:18,0:18:15.40:0,15,288	0/0:25,0:26:54.95:0,55,427	1/1:3,5:8:9.02:96,9,0	./.	./.	0/0:20,0:20:47.89:0,48,393	0/0:16,0:16:29.83:0,30,236	0/0:25,0:25:59.91:0,60,492	0/0:9,0:9:26.97:0,27,222
chr10	40303522	.	TC	T	3101.40	PASS	AB=0.987;AC=39;AF=0.696;AN=56;BaseQRankSum=4.032;DP=312;FS=0.549;HRun=1;HaplotypeScore=80.5135;InbreedingCoeff=0.7480;MQ=77.04;MQ0=3;MQRankSum=-4.141;QD=13.31;ReadPosRankSum=-2.397;VQSLOD=1.7027;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:18,1:19:49.38:388,49,0	1/1:3,3:6:17.98:153,18,0	0/1:22,1:13:28.56:29,0,126	0/0:23,0:14:16.69:0,17,144	1/1:0,7:7:14.88:107,15,0	0/1:16,0:15:5.58:6,0,338	0/0:11,0:11:17.73:0,18,249	1/1:19,1:20:43.71:348,44,0	0/0:6,0:6:15.01:0,15,164	1/1:10,2:12:24.70:188,25,0	1/1:12,3:15:27.80:212,28,0	0/0:5,0:5:15.04:0,15,192	0/1:11,0:10:1.05:1,0,216	0/0:6,0:5:14.62:0,15,160	1/1:8,4:11:25.75:192,26,0	1/1:7,1:8:17.48:115,17,0	1/1:8,2:10:18.38:142,18,0	1/1:11,2:13:17.93:148,18,0	1/1:11,2:13:34.15:265,34,0	1/1:4,0:4:10.25:82,10,0	1/1:6,0:6:14.97:125,15,0	1/1:2,0:2:5.97:46,6,0	0/0:5,0:5:12.04:0,12,165	0/0:22,0:22:59.85:0,60,819	1/1:4,0:4:9.01:81,9,0	1/1:8,0:8:19.66:153,20,0	1/1:12,0:12:30.25:242,30,0	1/1:11,0:11:32.96:277,33,0
chr10	40303524	.	TTTTTTTCTTTTTTTC	T	2273.20	PASS	AB=1.000;AC=22;AF=0.393;AN=56;BaseQRankSum=2.036;DP=320;FS=0.000;HRun=0;HaplotypeScore=159.8116;InbreedingCoeff=0.6109;MQ=74.49;MQ0=4;MQRankSum=-2.539;QD=17.09;ReadPosRankSum=0.114;VQSLOD=2.5620;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:20:49.99:0,50,1324	1/1:3,3:6:17.98:409,18,0	0/0:27,0:12:24.48:0,24,402	0/0:25,0:14:22.46:0,22,546	1/1:3,4:7:8.81:143,9,0	0/0:16,0:15:42.14:0,42,1859	0/0:11,0:11:24.07:0,24,1289	0/1:21,0:21:49.20:49,0,350	0/0:6,0:6:12.04:0,12,511	1/1:11,1:12:20.68:350,21,0	1/1:11,3:14:27.48:200,27,0	0/0:5,0:5:12.04:0,12,511	0/0:10,0:9:18.01:0,18,836	0/0:7,0:6:15.03:0,15,404	1/1:9,3:11:28.56:564,29,0	1/1:7,1:8:20.29:206,20,0	1/1:8,2:10:9.32:153,9,0	1/1:11,2:13:19.17:310,19,0	0/0:13,0:13:1.88:0,2,364	0/0:4,0:4:2.57:0,3,121	0/1:8,0:8:14.05:14,0,304	1/1:2,0:2:5.92:42,6,0	0/0:4,0:4:9.02:0,9,410	0/0:21,0:21:57.13:0,57,3672	0/0:4,0:4:5.38:0,5,144	0/1:9,0:9:31.90:32,0,100	0/0:12,0:12:18.43:0,18,502	0/1:11,0:11:0.13:0,0,61
chr10	40303530	.	TC	T	3487.66	PASS	AB=0.954;AC=41;AF=0.732;AN=56;BaseQRankSum=2.915;DP=322;FS=14.312;HRun=1;HaplotypeScore=80.4193;InbreedingCoeff=0.5060;MQ=68.00;MQ0=5;MQRankSum=-4.157;QD=13.52;ReadPosRankSum=-5.485;VQSLOD=0.2831;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:20,1:20:52.55:401,53,0	1/1:6,0:6:17.68:120,18,0	0/1:25,4:10:28.25:28,0,108	0/0:26,3:15:15.51:0,16,108	1/1:4,0:4:8.84:56,9,0	0/1:17,0:16:64.81:65,0,235	0/1:10,0:10:1.98:2,0,101	1/1:26,0:26:61.72:460,62,0	0/0:4,0:4:6.80:0,7,44	1/1:9,0:9:25.24:173,25,0	1/1:14,0:14:26.65:189,27,0	0/0:5,0:5:15.01:0,15,149	0/1:8,0:7:22.13:22,0,48	0/1:7,1:7:30.90:31,0,48	1/1:11,0:10:25.24:148,25,0	1/1:7,0:7:16.54:100,17,0	1/1:7,0:7:11.82:80,12,0	1/1:13,0:13:18.35:109,18,0	1/1:14,2:16:41.13:325,41,0	1/1:3,0:3:7.56:57,8,0	1/1:11,0:11:32.75:255,33,0	1/1:2,0:2:5.96:45,6,0	0/0:3,0:3:8.94:0,9,91	0/0:22,0:22:60.09:0,60,715	1/1:6,0:6:15.02:138,15,0	1/1:11,0:11:32.83:256,33,0	1/1:12,0:12:32.04:247,32,0	1/1:7,0:7:20.99:180,21,0
chr10	40303538	.	TC	T	3686.50	PASS	AB=0.919;AC=47;AF=0.839;AN=56;BaseQRankSum=0.490;DP=313;FS=11.626;HRun=1;HaplotypeScore=69.2512;InbreedingCoeff=0.5484;MQ=72.49;MQ0=5;MQRankSum=-3.111;QD=14.69;ReadPosRankSum=-4.486;VQSLOD=0.9564;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:22:60.27:477,60,0	1/1:6,0:6:17.87:132,18,0	0/0:31,2:10:0.27:0,0,56	0/1:31,3:17:19.31:19,0,129	1/1:5,0:5:8.94:67,9,0	1/1:17,0:16:28.89:195,29,0	1/1:10,0:10:19.84:125,20,0	1/1:24,0:24:51.57:395,52,0	1/1:4,0:4:0.08:21,0,0	1/1:2,0:2:5.93:41,6,0	1/1:7,0:7:20.78:149,21,0	0/0:3,0:3:9.03:0,9,107	1/1:6,0:5:4.44:48,4,0	1/1:7,1:7:17.09:126,17,0	1/1:17,0:15:32.08:223,32,0	1/1:5,0:5:9.85:62,10,0	1/1:15,0:15:32.70:229,33,0	1/1:5,0:5:5.94:42,6,0	1/1:17,0:17:43.45:327,43,0	1/1:2,0:2:3.47:27,3,0	1/1:12,0:12:35.72:273,36,0	1/1:1,0:1:2.97:20,3,0	0/0:4,0:4:8.98:0,9,95	0/0:22,0:22:45.16:0,45,668	1/1:7,0:7:18.01:163,18,0	1/1:0,9:9:26.85:202,27,0	1/1:11,0:11:28.19:224,28,0	1/1:4,0:4:11.98:100,12,0
chr10	40303928	.	CG	C	393.37	PASS	AB=0.864;AC=12;AF=0.214;AN=56;BaseQRankSum=-6.518;DP=386;FS=1.863;HRun=12;HaplotypeScore=114.7662;InbreedingCoeff=0.6022;MQ=67.04;MQ0=0;MQRankSum=7.607;QD=4.63;ReadPosRankSum=2.914;VQSLOD=2.0560;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:57.93:0,58,272	0/0:9,0:9:22.05:0,22,101	0/0:14,1:12:3.15:0,3,131	0/1:9,0:9:13.30:13,0,25	0/0:9,0:9:16.88:0,17,82	1/1:7,2:10:5.01:29,5,0	1/1:10,6:17:16.92:122,17,0	0/0:20,0:20:37.32:0,37,173	1/1:5,5:10:11.91:93,12,0	0/0:17,0:17:26.89:0,27,115	0/0:12,0:11:13.01:0,13,56	0/1:10,5:16:14.54:81,0,15	0/0:8,0:13:2.84:0,3,14	0/0:9,0:11:11.18:0,11,67	0/0:20,0:19:33.61:0,34,160	0/0:9,0:8:21.92:0,22,96	0/0:23,0:23:43.13:0,43,209	0/0:11,0:11:22.51:0,23,109	0/0:14,0:14:36.45:0,36,184	0/0:14,0:14:17.99:0,18,70	0/0:23,0:23:17.65:0,18,78	0/0:11,0:11:16.62:0,17,74	1/1:2,2:4:5.97:46,6,0	1/1:5,13:18:5.11:168,5,0	0/0:15,0:15:22.15:0,22,104	0/0:10,0:9:11.21:0,11,55	0/0:10,0:9:16.59:0,17,75	0/0:2,0:2:5.88:0,6,36
chr10	40303934	.	G	GT	2243.50	PASS	AB=1.000;AC=37;AF=0.661;AN=56;BaseQRankSum=6.607;DP=364;FS=24.422;HRun=0;HaplotypeScore=105.0067;InbreedingCoeff=0.8607;MQ=66.51;MQ0=0;MQRankSum=-9.287;QD=9.08;ReadPosRankSum=3.467;VQSLOD=2.0934;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:32,1:33:57.32:312,57,0	1/1:8,0:8:2.10:75,2,0	0/0:15,0:12:32.17:0,32,307	0/1:9,0:9:4.67:5,0,125	1/1:9,0:9:16.11:94,16,0	0/0:13,0:12:26.81:0,27,208	0/0:17,0:17:38.34:0,38,302	1/1:18,0:18:32.89:212,33,0	0/0:12,0:12:29.85:0,30,228	1/1:14,1:15:33.18:177,33,0	1/1:10,0:9:19.51:121,20,0	0/0:16,0:16:38.78:0,39,316	0/0:9,0:9:7.01:0,7,69	0/0:9,0:9:12.34:0,12,95	1/1:17,0:16:28.78:138,29,0	1/1:10,0:9:22.03:101,22,0	1/1:24,0:24:36.70:240,37,0	1/1:11,0:11:19.14:81,19,0	1/1:14,0:14:32.29:182,32,0	1/1:12,1:13:28.11:151,28,0	1/1:16,0:16:21.60:106,22,0	1/1:9,0:9:19.19:99,19,0	0/0:4,0:4:11.96:0,12,94	0/0:22,0:22:41.82:0,42,322	1/1:11,1:12:28.41:151,28,0	1/1:7,0:6:10.84:68,11,0	1/1:10,0:9:19.50:99,19,0	1/1:2,0:2:5.94:41,6,0
chr10	40303940	.	G	GTGGGGC	16805.78	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-1.237;DP=399;FS=30.977;HRun=0;HaplotypeScore=92.5502;InbreedingCoeff=0.9653;MQ=62.75;MQ0=0;MQRankSum=-11.364;QD=60.45;ReadPosRankSum=4.024;VQSLOD=3.2860;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,24:34:63.22:2133,63,0	1/1:1,8:9:24.08:820,24,0	0/0:15,0:12:29.59:0,30,385	0/0:7,0:8:24.06:0,24,310	1/1:0,7:7:17.99:465,18,0	0/0:13,0:13:30.02:0,30,412	0/0:16,0:17:42.09:0,42,612	1/1:5,16:26:72.12:1829,72,0	0/0:11,0:12:30.08:0,30,449	1/1:2,9:11:33.11:1069,33,0	1/1:2,6:7:15.05:451,15,0	0/0:14,0:14:36.04:0,36,606	0/0:9,0:9:12.04:0,12,190	0/0:9,0:9:18.04:0,18,228	1/1:3,16:20:36.12:1200,36,0	1/1:0,14:14:23.61:819,24,0	1/1:4,21:28:51.17:1652,51,0	1/1:3,10:14:27.09:931,27,0	1/1:9,9:18:42.14:1252,42,0	1/1:3,7:13:23.74:786,24,0	1/1:2,21:31:17.91:599,18,0	1/1:0,5:6:18.06:609,18,0	0/0:4,0:4:12.04:0,12,203	0/0:20,0:20:42.14:0,42,722	1/1:3,9:13:24.08:791,24,0	1/1:1,5:7:20.97:478,21,0	1/1:1,10:13:24.91:716,25,0	1/1:2,0:2:6.02:205,6,0
chr10	40304770	.	GT	G	1832.38	PASS	AB=0.742;AC=43;AF=0.768;AN=56;BaseQRankSum=2.458;DP=611;FS=6.800;HRun=16;HaplotypeScore=109.7132;InbreedingCoeff=0.1001;MQ=68.53;MQ0=13;MQRankSum=-2.309;QD=3.39;ReadPosRankSum=4.662;VQSLOD=0.5649;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:26:28.96:0,29,178	0/1:2,4:6:13.39:42,0,13	0/1:61,1:21:1.31:1,0,51	0/0:44,0:17:12.26:0,12,76	1/1:7,18:26:9.16:145,9,0	1/1:9,11:21:9.05:160,9,0	0/1:18,1:21:28.68:29,0,54	1/1:12,0:21:18.92:59,19,0	0/1:12,7:20:44:66,0,44	1/1:15,3:20:5.64:107,6,0	1/1:5,11:18:5.75:117,6,0	1/1:1,0:18:32.36:91,32,0	0/1:11,7:16:5.46:72,0,5	0/1:16,3:20:28.60:41,0,29	1/1:6,14:23:12.91:166,13,0	0/1:5,5:10:10.56:57,0,11	1/1:11,14:26:2.60:124,3,0	0/1:4,8:11:10.62:57,0,11	1/1:12,3:20:21.75:91,22,0	1/1:9,2:24:30.16:106,30,0	1/1:5,0:20:15.96:46,16,0	0/1:8,6:15:30.74:58,0,31	1/1:5,0:26:34.60:97,35,0	1/1:3,0:14:9.36:26,9,0	1/1:3,0:18:20.32:59,20,0	1/1:14,1:28:25.12:82,25,0	1/1:15,2:25:15.89:66,16,0	1/1:1,1:4:6.95:30,7,0
chr10	40305020	.	TAAA	T	987.52	PASS	AB=0.951;AC=12;AF=0.214;AN=56;BaseQRankSum=-5.710;DP=619;FS=0.470;HRun=16;HaplotypeScore=189.7624;InbreedingCoeff=0.3252;MQ=70.63;MQ0=7;MQRankSum=3.048;QD=5.28;ReadPosRankSum=-0.350;VQSLOD=0.0207;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:12.68:0,13,613	0/0:11,0:11:8.26:0,8,162	0/0:49,0:23:6.52:0,7,243	0/0:32,0:21:14.51:0,15,127	0/0:22,0:22:6.78:0,7,472	0/0:27,0:27:75.17:0,75,890	0/0:20,0:21:49.75:0,50,556	0/1:12,0:13:34.51:35,0,123	0/0:21,0:21:51.15:0,51,600	0/0:31,0:31:48.88:0,49,856	0/0:17,0:18:19.59:0,20,348	1/1:5,11:17:12.34:157,12,0	0/0:23,0:22:51.16:0,51,616	0/0:23,0:23:43.64:0,44,529	0/1:23,0:24:13.69:14,0,380	0/1:23,0:24:28.02:28,0,483	0/0:16,0:16:29.80:0,30,339	0/1:19,0:19:32.14:32,0,193	0/0:15,0:14:24.08:0,24,314	0/1:24,0:25:2.67:3,0,254	0/1:15,0:16:45.26:45,0,140	0/0:16,0:16:38.44:0,38,427	1/1:12,17:30:40.19:417,40,0	1/1:2,16:18:39.08:420,39,0	0/0:13,0:16:11.30:0,11,320	0/0:20,0:20:42.37:0,42,608	0/0:23,0:23:43.84:0,44,567	0/0:5,0:5:6.02:0,6,79
chr10	40305024	.	A	AG	5294.44	PASS	AB=0.701;AC=28;AF=0.500;AN=56;BaseQRankSum=10.203;DP=662;FS=17.060;HRun=0;HaplotypeScore=168.7745;InbreedingCoeff=0.4493;MQ=64.34;MQ0=8;MQRankSum=-12.071;QD=13.47;ReadPosRankSum=4.724;VQSLOD=5.1061;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,21:40:74.28:609,74,0	1/1:6,4:10:29.34:202,29,0	0/0:56,0:22:43.52:0,44,387	0/0:34,0:19:18.12:0,18,161	1/1:12,14:26:6.22:352,6,0	0/0:27,0:27:81.18:0,81,1043	0/0:24,0:23:66.17:0,66,821	0/1:12,2:14:5.70:160,0,6	0/0:22,0:22:66.05:0,66,822	0/1:13,23:36:0.04:529,0,0	1/1:9,10:19:32.50:344,33,0	0/0:13,0:13:20.97:0,21,174	0/0:20,0:20:50.10:0,50,279	0/0:23,0:23:52.36:0,52,299	1/1:16,10:26:10.94:374,11,0	1/1:10,15:25:16.33:384,16,0	0/1:11,8:19:9.32:222,0,9	0/1:13,8:20:20.48:187,0,20	0/1:12,7:18:50.63:186,0,51	1/1:18,7:25:21.17:333,21,0	1/1:10,6:16:15.76:182,16,0	0/1:9,11:20:40.61:231,0,41	0/0:31,0:31:69.61:0,70,569	0/0:19,0:19:41.83:0,42,334	0/1:9,9:18:21.90:202,0,22	0/1:12,14:26:41.35:329,0,41	1/1:9,14:24:8.60:372,9,0	1/1:6,3:9:11.36:97,11,0
chr10	40305028	.	AAAAAAAAAC	A	661.12	PASS	AB=0.975;AC=10;AF=0.179;AN=56;BaseQRankSum=-1.710;DP=681;FS=2.651;HRun=0;HaplotypeScore=270.9691;InbreedingCoeff=-0.2272;MQ=66.11;MQ0=8;MQRankSum=-1.404;QD=2.96;ReadPosRankSum=-4.182;VQSLOD=1.9677;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:38,0:39:84.86:85,0,1955	0/1:10,0:10:46.33:46,0,454	0/0:60,0:24:27.93:0,28,883	0/0:39,0:22:21.93:0,22,491	0/1:31,0:31:34.07:34,0,1964	0/0:28,0:28:81.28:0,81,2933	0/0:22,0:21:60.10:0,60,2036	0/1:14,0:14:99:124,0,461	0/0:21,0:21:57.19:0,57,1966	0/0:38,0:38:15.53:0,16,3185	0/1:17,0:17:27.02:27,0,1042	0/0:13,0:13:18.53:0,19,400	0/0:23,0:23:51.65:0,52,1911	0/0:24,0:24:51.14:0,51,1649	0/1:24,0:24:62.06:62,0,1570	0/1:25,0:25:99:105,0,1614	0/0:18,0:18:41.46:0,41,1104	0/1:21,0:20:99:114,0,908	0/0:23,0:22:57.19:0,57,1782	0/1:16,8:24:91.85:92,0,920	0/1:18,0:18:99:116,0,562	0/0:21,0:21:55.53:0,56,1404	0/0:33,0:33:64.55:0,65,1219	0/0:19,0:19:42.14:0,42,894	0/0:17,0:17:3.68:0,4,1283	0/0:27,0:27:55.34:0,55,2566	0/0:21,0:22:24.16:0,24,1765	0/0:9,0:9:18.06:0,18,517
chr10	40305029	.	A	AAAACC	18104.61	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-3.210;DP=686;FS=7.137;HRun=0;HaplotypeScore=174.1700;InbreedingCoeff=0.9713;MQ=65.42;MQ0=8;MQRankSum=-11.765;QD=44.92;ReadPosRankSum=-1.108;VQSLOD=3.9375;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:18,21:39:80.52:1877,81,0	1/1:7,4:11:23.53:482,24,0	0/0:62,0:25:13.10:0,13,465	0/0:38,0:21:30.37:0,30,340	1/1:8,13:31:83.65:1474,84,0	0/0:28,0:28:81.27:0,81,1393	0/0:22,0:21:59.66:0,60,986	1/1:10,2:15:3.87:462,4,0	0/0:21,0:21:57.15:0,57,980	1/1:7,23:38:99:1990,102,0	1/1:5,9:17:38.47:752,38,0	0/0:13,0:13:21.03:0,21,283	0/0:24,0:24:50.96:0,51,613	0/0:23,0:23:51.15:0,51,609	1/1:11,10:23:51.33:1093,51,0	1/1:7,15:26:47.48:1150,47,0	1/1:5,8:18:30.39:809,30,0	1/1:11,8:20:43.34:818,43,0	1/1:4,7:22:46.80:1017,47,0	1/1:15,7:24:29.56:685,30,0	1/1:4,6:18:32.66:543,33,0	1/1:4,10:22:56.99:1081,57,0	0/0:33,0:33:60.53:0,61,819	0/0:19,0:19:45.15:0,45,633	1/1:5,9:17:45.03:817,45,0	1/1:2,14:26:78.24:1518,78,0	1/1:5,11:25:63.19:1224,63,0	1/1:5,3:9:17.52:314,18,0
chr10	40305031	.	A	AC	1256.93	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=-9.888;DP=678;FS=0.551;HRun=0;HaplotypeScore=189.9928;InbreedingCoeff=0.7967;MQ=64.93;MQ0=8;MQRankSum=6.561;QD=10.84;ReadPosRankSum=0.967;VQSLOD=3.7759;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:92.75:0,93,544	0/0:11,0:11:31.83:0,32,191	0/0:61,0:24:45.78:0,46,407	0/0:39,0:22:30.44:0,30,222	0/0:30,0:30:83.99:0,84,461	0/1:28,0:28:15.07:64,0,15	1/1:22,0:21:7.96:100,8,0	0/0:15,0:15:34.53:0,35,198	1/1:19,0:19:2.76:43,3,0	0/0:37,0:37:99:0,100,515	0/0:17,0:17:43.24:0,43,222	0/0:14,0:14:20.67:0,21,133	1/1:0,23:23:50.92:596,51,0	1/1:0,23:24:51.16:605,51,0	0/0:22,0:22:61.26:0,61,350	0/0:25,0:25:62.78:0,63,326	0/0:18,0:18:43.21:0,43,249	0/0:22,0:21:49.43:0,49,300	0/0:23,0:22:60.49:0,60,357	0/0:23,0:23:54.12:0,54,295	0/0:19,0:19:39:0,39,208	0/0:21,0:21:57.79:0,58,362	0/0:30,0:30:68.11:0,68,445	0/0:19,0:19:41.25:0,41,266	0/0:17,0:17:42.75:0,43,228	0/0:26,0:26:71.03:0,71,365	0/0:25,0:25:59.05:0,59,307	0/0:8,0:8:19.74:0,20,123
chr10	40306047	.	T	TGCCACCCTACGTCTAGGA	92584.63	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-6.214;DP=641;FS=1.612;HRun=0;HaplotypeScore=279.3415;InbreedingCoeff=0.9595;MQ=62.91;MQ0=0;MQRankSum=-8.266;QD=151.28;ReadPosRankSum=3.532;VQSLOD=4.4955;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:40:93.27:5937,93,0	1/1:4,4:9:24.04:1703,24,0	0/0:13,0:13:33.11:0,33,1281	0/0:16,0:16:45.07:0,45,1446	1/1:17,9:29:14.16:1277,14,0	1/1:19,6:26:66.23:4315,66,0	1/1:16,6:25:60.20:3337,60,0	1/1:32,0:32:87.29:5139,87,0	1/1:18,12:31:87.30:6050,87,0	1/1:23,6:31:93.27:5725,93,0	1/1:8,4:15:21.07:1201,21,0	1/1:13,5:23:57.19:3673,57,0	1/1:16,6:23:60.21:4018,60,0	1/1:18,7:27:75.26:4640,75,0	1/1:27,5:33:87.30:5431,87,0	1/1:19,11:33:84.29:5847,84,0	1/1:12,6:22:42.14:3061,42,0	1/1:10,3:14:39.13:2849,39,0	1/1:11,5:17:51.18:2899,51,0	1/1:12,6:20:36.12:2740,36,0	1/1:16,6:28:29.36:1609,29,0	1/1:9,2:11:12.04:450,12,0	1/1:14,4:19:36.04:2652,36,0	1/1:7,6:18:18.06:1470,18,0	1/1:7,5:13:33.11:2172,33,0	1/1:22,6:29:90.31:6936,90,0	1/1:22,11:36:96.76:6342,97,0	1/1:2,4:6:15.05:1114,15,0
chr10	40306721	.	A	AC	21389.64	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-12.315;DP=645;FS=0.856;HRun=2;HaplotypeScore=58.7383;InbreedingCoeff=0.9969;MQ=72.76;MQ0=0;MQRankSum=-5.082;QD=39.18;ReadPosRankSum=3.031;VQSLOD=5.3880;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,144,1783	1/1:0,7:7:21.07:302,21,0	0/0:24,0:23:60.11:0,60,693	0/0:26,0:24:72.16:0,72,837	1/1:0,25:25:75.25:1080,75,0	1/1:2,17:19:48.16:691,48,0	1/1:0,29:29:81.27:1166,81,0	1/1:1,25:26:75.25:1080,75,0	1/1:0,24:24:69.23:994,69,0	1/1:1,20:21:57.19:821,57,0	1/1:1,19:20:57.19:821,57,0	1/1:1,20:21:60.20:864,60,0	1/1:0,14:14:33.11:475,33,0	1/1:1,13:14:33.11:475,33,0	1/1:0,36:36:99:1469,102,0	1/1:1,19:20:54.18:778,54,0	1/1:1,35:35:99:1512,105,0	1/1:1,20:21:54.18:767,54,0	1/1:2,15:17:48.14:664,48,0	1/1:0,18:18:48.16:691,48,0	1/1:1,30:31:75.25:1080,75,0	1/1:1,21:22:57.19:820,57,0	1/1:0,24:24:69.23:994,69,0	1/1:2,20:22:60.20:864,60,0	1/1:1,14:15:36.12:518,36,0	1/1:0,34:34:99:1427,102,0	1/1:2,20:22:50.79:734,51,0	1/1:0,8:8:21.07:302,21,0
chr10	40307358	.	AAATG	A	5977.77	PASS	AB=0.993;AC=36;AF=0.643;AN=56;BaseQRankSum=0.124;DP=457;FS=2.532;HRun=0;HaplotypeScore=111.5869;InbreedingCoeff=-0.2421;MQ=64.07;MQ0=2;MQRankSum=-1.245;QD=13.93;ReadPosRankSum=3.636;VQSLOD=4.6711;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:3,0:29:12.27:183,12,0	0/1:6,0:6:34.94:35,0,118	0/0:13,0:8:18:0,18,202	0/0:15,0:12:21.55:0,22,240	1/1:0,20:20:35.63:328,36,0	0/1:20,0:20:99:244,0,293	0/1:13,0:13:13.04:227,0,13	1/1:21,0:21:62.74:536,63,0	0/1:20,0:20:99:119,0,516	0/1:13,1:14:93.37:281,0,93	0/1:7,0:15:99:146,0,116	0/1:19,0:19:72.80:73,0,481	1/1:0,13:13:11.71:230,12,0	1/1:2,9:11:18.06:348,18,0	1/1:1,0:20:26.98:311,27,0	1/1:0,0:13:23.98:273,24,0	1/1:16,0:20:53.78:484,54,0	0/1:18,0:18:56.96:57,0,405	0/1:9,0:9:18.20:149,0,18	0/1:13,0:13:32.04:186,0,32	0/1:12,0:12:85.79:146,0,86	1/1:0,0:20:50.58:478,51,0	1/1:0,16:16:17.85:266,18,0	0/1:18,0:18:99:163,0,263	0/1:11,0:19:23.30:168,0,23	0/1:21,0:21:99:288,0,185	0/1:20,1:21:99:249,0,297	0/1:7,0:7:10.16:10,0,150
chr10	40308220	.	TG	T	13392.29	PASS	AB=0.800;AC=55;AF=0.982;AN=56;BaseQRankSum=-1.712;DP=389;FS=4.938;HRun=2;HaplotypeScore=47.5186;InbreedingCoeff=-0.0178;MQ=64.00;MQ0=0;MQRankSum=1.412;QD=34.43;ReadPosRankSum=1.722;VQSLOD=4.8417;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,25:25:69.22:896,69,0	1/1:0,4:4:12.04:156,12,0	1/1:2,4:6:12.04:151,12,0	0/1:5,2:4:0.72:34,0,1	1/1:0,13:13:27.09:350,27,0	1/1:0,9:9:24.08:311,24,0	1/1:1,18:19:51.17:662,51,0	1/1:1,20:21:57.19:740,57,0	1/1:1,20:21:54.18:701,54,0	1/1:1,10:11:30.08:374,30,0	1/1:0,12:12:30.10:389,30,0	1/1:0,7:7:21.07:273,21,0	1/1:0,21:21:57.19:740,57,0	1/1:0,17:17:48.16:623,48,0	1/1:0,17:17:45.15:583,45,0	1/1:0,23:23:66.21:857,66,0	1/1:1,12:13:33.11:428,33,0	1/1:0,3:3:6.02:78,6,0	1/1:1,12:13:36.12:466,36,0	1/1:0,15:15:45.14:576,45,0	1/1:0,16:16:48.16:623,48,0	1/1:0,19:19:51.16:658,51,0	1/1:0,6:6:18.06:230,18,0	1/1:1,16:17:48.16:623,48,0	1/1:1,13:14:39.13:506,39,0	1/1:0,19:19:57.19:740,57,0	1/1:0,17:17:39.13:506,39,0	1/1:0,3:3:9.03:117,9,0
chr10	40308447	.	T	TA	12777.28	PASS	AB=0.833;AC=55;AF=0.982;AN=56;BaseQRankSum=-1.597;DP=388;FS=0.000;HRun=3;HaplotypeScore=119.0801;InbreedingCoeff=-0.0252;MQ=51.79;MQ0=0;MQRankSum=-1.710;QD=32.93;ReadPosRankSum=0.382;VQSLOD=3.9742;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,24:27:66.22:920,66,0	1/1:0,3:3:9.03:126,9,0	1/1:3,2:3:5.98:62,6,0	0/1:3,1:3:29.84:36,0,30	1/1:4,12:16:33.10:446,33,0	1/1:1,16:17:45.15:628,45,0	1/1:2,20:22:57.19:796,57,0	1/1:4,19:23:54.18:754,54,0	1/1:1,13:13:33.11:461,33,0	1/1:3,7:10:30.10:419,30,0	1/1:2,10:12:24.08:334,24,0	1/1:0,18:18:42.14:586,42,0	1/1:1,15:16:39.13:538,39,0	1/1:0,16:16:45.15:629,45,0	1/1:0,14:14:30.10:419,30,0	1/1:2,19:21:36.12:503,36,0	1/1:1,21:22:57.18:796,57,0	1/1:1,7:8:18.06:252,18,0	1/1:2,12:14:36.12:503,36,0	1/1:1,8:9:24.08:334,24,0	1/1:5,7:12:24.08:330,24,0	1/1:3,14:17:39.13:544,39,0	1/1:0,8:8:18.06:251,18,0	1/1:2,13:15:33.11:450,33,0	1/1:0,7:7:21.07:293,21,0	1/1:3,11:14:42.13:572,42,0	1/1:4,14:18:42.14:586,42,0	1/1:0,5:5:15.05:209,15,0
chr10	40308533	.	C	CAAA	4326.18	PASS	AB=0.973;AC=35;AF=0.625;AN=56;BaseQRankSum=5.846;DP=409;FS=3.151;HRun=6;HaplotypeScore=125.1982;InbreedingCoeff=0.6584;MQ=51.71;MQ0=10;MQRankSum=-7.772;QD=16.20;ReadPosRankSum=-5.117;VQSLOD=0.1913;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:12,0:24:15.26:216,15,0	0/0:5,0:5:8.76:0,9,58	0/0:19,0:5:8.54:0,9,62	0/0:13,0:7:0.72:0,1,96	0/0:20,0:20:15.24:0,15,193	1/1:11,2:15:37.27:387,37,0	1/1:11,10:23:57.06:905,57,0	1/1:16,0:14:10.38:256,10,0	1/1:9,3:12:10.75:317,11,0	0/0:17,0:15:22.88:0,23,161	0/1:12,0:12:10.51:11,0,52	1/1:12,0:15:30:382,30,0	1/1:15,0:15:7.92:217,8,0	1/1:13,1:13:24.08:386,24,0	0/0:18,0:18:31.77:0,32,222	0/0:19,0:19:25.77:0,26,184	0/0:21,0:21:35.05:0,35,261	0/1:16,0:16:2.26:2,0,156	1/1:16,0:15:5.35:80,5,0	1/1:11,0:11:17.96:241,18,0	1/1:5,0:5:0.47:1,0,0	0/0:10,0:10:17.67:0,18,116	1/1:4,0:6:9.14:132,9,0	1/1:6,0:9:8.92:100,9,0	1/1:5,0:7:9.03:113,9,0	0/1:21,0:21:10.23:197,0,10	1/1:15,0:16:11.35:258,11,0	1/1:5,0:7:10.36:124,10,0
chr10	40308554	.	A	AG	6846.39	PASS	AB=0.611;AC=31;AF=0.554;AN=56;BaseQRankSum=2.299;DP=468;FS=9.553;HRun=0;HaplotypeScore=97.1564;InbreedingCoeff=0.8877;MQ=60.88;MQ0=5;MQRankSum=-3.736;QD=27.06;ReadPosRankSum=0.441;VQSLOD=4.7314;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:23:59.84:0,60,695	0/0:5,0:5:15.04:0,15,194	0/0:16,0:7:5.11:0,5,99	0/0:17,0:12:19.54:0,20,135	0/0:22,0:22:47.97:0,48,566	1/1:3,19:21:31.11:532,31,0	1/1:4,18:22:22:621,22,0	1/1:5,27:30:75.05:906,75,0	1/1:2,12:14:23.31:433,23,0	0/0:21,0:21:56.93:0,57,677	0/0:19,0:19:50.99:0,51,594	1/1:5,6:12:32.06:306,32,0	0/1:4,7:11:16.86:237,0,17	1/1:5,5:9:12.33:194,12,0	0/0:13,0:13:39.13:0,39,531	0/0:15,0:15:41.89:0,42,536	0/0:32,0:32:78.12:0,78,984	0/0:16,0:16:38.65:0,39,414	1/1:5,20:24:62.85:718,63,0	1/1:0,17:17:45.15:599,45,0	1/1:2,3:5:8.86:116,9,0	0/0:15,0:15:39.11:0,39,511	1/1:3,14:16:18.59:370,19,0	1/1:1,8:9:21.03:237,21,0	1/1:2,10:12:27.09:350,27,0	1/1:2,12:13:10.18:288,10,0	1/1:1,13:14:24.95:314,25,0	1/1:0,17:17:48.14:626,48,0
chr10	40308919	.	GCTTT	G	5958.10	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=5.239;DP=563;FS=30.542;HRun=0;HaplotypeScore=180.9619;InbreedingCoeff=0.9979;MQ=65.71;MQ0=2;MQRankSum=-6.558;QD=36.78;ReadPosRankSum=-1.701;VQSLOD=3.1308;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:57.20:0,57,1421	0/0:7,0:7:21.06:0,21,414	0/0:25,0:23:54.13:0,54,1186	0/0:19,0:16:24.06:0,24,517	0/0:19,0:19:36.09:0,36,834	0/0:23,0:23:63.22:0,63,1527	0/0:26,0:26:78.27:0,78,1838	1/1:8,26:32:72.17:1118,72,0	0/0:10,0:10:30.10:0,30,738	0/0:18,0:18:48.16:0,48,1181	0/0:19,0:19:42.14:0,42,1030	0/0:17,0:16:42.14:0,42,1090	0/0:18,0:18:36.12:0,36,806	0/0:19,0:19:54.19:0,54,1336	0/0:28,0:28:84.25:0,84,1968	0/0:22,0:22:63.22:0,63,1576	0/0:17,0:17:45.13:0,45,1057	0/0:27,0:27:57.19:0,57,1322	1/1:9,7:16:30.09:477,30,0	1/1:3,15:18:45.15:801,45,0	1/1:5,12:17:27.09:482,27,0	0/0:22,0:22:54.64:0,55,1278	0/0:18,0:17:30.08:0,30,581	0/0:23,0:23:22.46:0,22,989	1/1:2,11:13:33.11:592,33,0	1/1:7,9:16:36.12:624,36,0	1/1:4,21:25:69.24:1219,69,0	1/1:13,10:23:42.11:644,42,0
chr10	40308947	.	CCTCTCTCTCTCTCTCTCTCTCCCTCTCTCTCTCTCTCTCT	C	6493.32	PASS	AB=1.000;AC=32;AF=0.667;AN=48;BaseQRankSum=3.125;DP=486;FS=13.495;HRun=0;HaplotypeScore=422.0725;InbreedingCoeff=-0.0286;MQ=42.89;MQ0=26;MQRankSum=-3.719;QD=17.89;ReadPosRankSum=-0.442;VQSLOD=1.4213;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:19:9.94:0,10,1219	./.	./.	0/0:37,0:13:3.72:0,4,90	1/1:15,0:13:15.05:504,15,0	0/1:22,0:21:31.99:32,0,174	0/1:19,0:19:5.78:6,0,394	0/1:31,0:28:80.90:130,0,81	./.	0/1:12,0:12:19.61:409,0,20	1/1:12,0:12:11.87:212,12,0	1/1:12,0:10:21.03:777,21,0	0/0:6,0:21:2.50:0,2,10	0/1:13,0:13:54.98:55,0,219	1/1:24,0:24:18.04:554,18,0	1/1:19,0:18:21.03:573,21,0	0/1:18,0:17:0.13:341,0,0	0/1:25,0:24:72.06:599,0,72	0/1:10,0:9:66.63:67,0,104	1/1:16,0:16:12.16:260,12,0	./.	1/1:22,0:20:21.06:595,21,0	1/1:4,17:19:2.99:23,3,0	1/1:18,0:17:21.54:946,22,0	1/1:14,0:14:8.20:179,8,0	0/1:10,0:9:30.27:30,0,45	0/1:21,0:21:82.79:150,0,83	1/1:9,0:8:5.98:54,6,0
chr10	40308956	.	CTCTCTCTCTCT	C	2434.40	PASS	AB=1.000;AC=18;AF=0.333;AN=54;BaseQRankSum=4.817;DP=431;FS=14.376;HRun=0;HaplotypeScore=183.6644;InbreedingCoeff=0.7496;MQ=41.01;MQ0=41;MQRankSum=-3.868;QD=15.21;ReadPosRankSum=1.112;VQSLOD=1.5047;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:18:45.13:0,45,739	./.	0/0:23,0:5:14.97:0,15,198	0/0:34,0:10:14.84:0,15,190	1/1:12,2:12:17.89:146,18,0	0/0:19,0:18:48.06:0,48,608	0/0:18,0:18:45.03:0,45,496	0/0:26,0:22:56.95:0,57,606	0/0:3,0:2:3.01:0,3,52	1/1:11,0:9:24.02:236,24,0	1/1:9,0:8:11.90:94,12,0	0/0:11,0:7:21:0,21,200	0/1:18,0:18:23.78:24,0,89	0/0:13,0:13:33.02:0,33,324	1/1:17,2:19:39.80:541,40,0	1/1:17,0:15:44.58:420,45,0	1/1:14,0:13:38.32:327,38,0	1/1:20,1:22:7.53:380,8,0	0/0:11,0:8:23.98:0,24,261	0/0:15,0:15:24.02:0,24,258	0/0:7,0:7:12.04:0,12,203	1/1:16,2:16:43.37:423,43,0	0/0:20,0:18:3:0,3,27	0/1:17,0:15:41.61:42,0,163	0/0:13,0:13:22.94:0,23,245	0/0:9,0:7:20.93:0,21,194	0/0:17,0:17:41.48:0,41,513	0/0:9,0:7:21.06:0,21,316
chr10	40308970	.	CTCTCTCTCTCTCTCTCTCTCTCTCT	C	3096.76	PASS	AB=0.994;AC=20;AF=0.385;AN=52;BaseQRankSum=8.252;DP=360;FS=2.059;HRun=0;HaplotypeScore=225.9079;InbreedingCoeff=0.0262;MQ=34.88;MQ0=52;MQRankSum=-6.750;QD=16.30;ReadPosRankSum=8.025;VQSLOD=1.9517;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:20:40.43:0,40,1457	./.	./.	0/0:25,0:5:3.01:0,3,73	1/1:10,2:9:14.54:368,15,0	0/0:11,0:10:21.01:0,21,243	0/0:18,0:18:30.99:0,31,702	0/0:17,0:15:44.99:0,45,452	0/0:9,0:7:8.37:0,8,274	0/1:11,0:8:33.39:264,0,33	0/1:9,0:8:7.70:94,0,8	0/1:12,0:7:66.52:190,0,67	1/1:17,0:16:3.48:98,3,0	0/0:10,0:10:10.19:0,10,162	1/1:10,2:12:17.79:357,18,0	1/1:14,0:12:3.01:279,3,0	0/1:10,0:9:37.36:245,0,37	0/1:15,1:15:25:383,0,25	0/1:12,0:8:99:128,0,150	0/1:12,0:12:84.91:145,0,85	0/0:3,0:2:3.01:0,3,50	1/1:10,2:9:16.70:369,17,0	0/0:20,0:18:3:0,3,27	0/1:19,0:16:99:249,0,142	0/1:11,0:11:70.50:70,0,105	0/0:10,0:7:20.51:0,21,187	0/1:11,0:11:19.92:20,0,146	0/0:8,0:2:1.42:0,1,27
chr10	40308976	.	CTCTCTCT	C	1119.59	PASS	AB=0.981;AC=18;AF=0.333;AN=54;BaseQRankSum=-0.279;DP=363;FS=6.232;HRun=0;HaplotypeScore=151.1007;InbreedingCoeff=-0.4527;MQ=34.48;MQ0=52;MQRankSum=-4.939;QD=5.31;ReadPosRankSum=-2.002;VQSLOD=1.8941;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:21:11.98:0,12,514	./.	0/0:9,0:1:3.01:0,3,31	0/0:21,0:5:3.01:0,3,39	0/1:17,0:14:89.78:90,0,100	0/0:9,0:8:18.06:0,18,260	0/0:16,0:16:23.77:0,24,304	0/1:10,0:8:24.29:24,0,104	0/0:11,0:9:14.95:0,15,287	0/1:12,0:9:52.49:52,0,181	0/1:9,0:8:21.67:22,0,64	0/0:10,0:5:2.56:0,3,117	0/0:18,0:17:4.26:0,4,42	0/0:13,0:13:33.10:0,33,504	0/1:13,0:13:36.31:36,0,140	0/1:14,0:12:18.65:19,0,184	0/1:9,1:9:61.94:103,0,62	0/1:17,1:17:99:108,0,277	0/1:9,0:7:52.57:53,0,132	0/1:13,0:13:64.67:65,0,208	1/1:1,2:2:2.97:20,3,0	0/1:14,0:11:99:190,0,159	0/0:20,0:18:2.99:0,3,23	0/1:18,0:15:44.07:44,0,158	0/1:15,0:15:99:153,0,227	0/1:12,0:8:94.95:95,0,128	0/1:13,0:13:99:126,0,229	0/1:9,0:3:28.66:71,0,29
chr10	40308982	.	CT	C	981.58	PASS	AB=0.816;AC=16;AF=0.308;AN=52;BaseQRankSum=-0.504;DP=324;FS=2.955;HRun=1;HaplotypeScore=115.1345;InbreedingCoeff=-0.3874;MQ=36.28;MQ0=55;MQRankSum=-5.305;QD=6.50;ReadPosRankSum=-0.614;VQSLOD=0.3566;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:22:51.11:0,51,638	./.	0/0:6,0:1:3:0,3,25	0/0:13,0:3:3.01:0,3,39	0/1:9,5:11:53.40:53,0,113	0/0:8,0:7:15.01:0,15,172	0/0:15,0:15:20.96:0,21,265	0/1:5,2:5:51.06:54,0,51	0/0:11,0:9:14.75:0,15,210	0/1:7,2:6:61.42:61,0,119	0/1:5,1:5:14.32:14,0,56	0/1:12,0:6:2.38:2,0,127	0/0:19,0:18:9.03:0,9,116	0/0:14,0:14:33.11:0,33,417	0/0:6,3:9:0.15:0,0,152	0/1:8,1:7:22.06:22,0,154	0/1:5,2:6:25.83:69,0,26	0/1:9,3:11:86.59:87,0,207	0/0:12,0:8:1.92:0,2,68	0/1:8,3:11:99:107,0,151	1/1:4,0:3:2.53:19,3,0	0/1:10,2:9:99:129,0,107	./.	0/0:20,0:17:2.66:0,3,194	0/1:10,5:15:99:198,0,156	0/1:8,3:8:85.67:102,0,86	0/1:9,4:13:99:133,0,177	0/1:7,2:3:24.04:71,0,24
chr10	40308986	.	CT	C	188.79	PASS	AB=0.894;AC=4;AF=0.074;AN=54;BaseQRankSum=1.124;DP=375;FS=0.000;HRun=1;HaplotypeScore=130.9266;InbreedingCoeff=-0.1054;MQ=37.19;MQ0=54;MQRankSum=-2.512;QD=3.43;ReadPosRankSum=1.717;VQSLOD=0.1538;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:22:49.40:0,49,625	0/0:2,0:2:6.01:0,6,65	0/0:9,0:1:3.01:0,3,37	0/0:12,0:2:3.01:0,3,38	0/0:16,0:13:19.24:0,19,172	0/0:9,0:8:15.03:0,15,175	0/0:13,0:13:17.95:0,18,228	0/0:11,1:9:21.06:0,21,257	0/0:11,0:9:14.75:0,15,210	0/0:12,0:9:18.33:0,18,189	0/1:9,0:8:9.22:9,0,51	0/1:12,3:9:57.52:58,0,151	0/0:19,0:18:9.02:0,9,104	0/0:13,0:13:30.10:0,30,377	0/0:9,0:9:17.96:0,18,173	0/0:9,0:7:15.52:0,16,176	0/1:11,0:10:3.52:4,0,30	0/0:15,0:14:16.08:0,16,251	0/0:12,0:9:26.82:0,27,282	0/0:20,0:20:30.76:0,31,363	0/0:5,0:4:3.01:0,3,38	0/0:14,0:11:12.18:0,12,102	./.	0/1:13,7:17:99:216,0,107	0/0:17,0:17:33.87:0,34,366	0/0:14,0:12:33.52:0,34,364	0/0:18,0:18:47.95:0,48,493	0/0:13,0:7:14.96:0,15,140
chr10	40309050	.	GTTTCTTTC	G	7338.15	PASS	AB=0.535;AC=15;AF=0.268;AN=56;BaseQRankSum=9.182;DP=610;FS=2.303;HRun=0;HaplotypeScore=183.5263;InbreedingCoeff=0.8632;MQ=57.05;MQ0=8;MQRankSum=-7.451;QD=44.74;ReadPosRankSum=0.433;VQSLOD=4.6904;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:60.10:0,60,1936	0/0:7,0:7:18.06:0,18,509	0/0:19,0:10:21.34:0,21,505	0/0:18,0:14:24.47:0,24,451	0/0:37,0:37:99:0,102,3463	0/0:16,0:16:42.14:0,42,1671	0/0:20,0:20:54.11:0,54,1667	1/1:8,17:25:44.98:765,45,0	0/0:15,0:14:42.14:0,42,1469	0/0:22,0:22:60.20:0,60,2103	0/0:25,0:25:66.23:0,66,2351	0/0:18,0:17:45.15:0,45,1738	0/0:22,0:22:57.13:0,57,2025	0/0:19,0:19:57.19:0,57,2157	0/0:26,0:26:72.23:0,72,2456	0/0:19,0:19:54.18:0,54,1960	0/0:27,0:27:75.13:0,75,2556	0/0:33,0:33:78.27:0,78,2796	1/1:7,8:12:23.82:437,24,0	1/1:4,29:33:81.04:1805,81,0	1/1:2,7:9:3.01:80,3,0	0/0:24,0:24:69.24:0,69,2069	0/0:27,0:27:51.17:0,51,1716	0/0:30,0:30:81.15:0,81,2802	1/1:4,17:21:42.14:1091,42,0	0/1:3,20:23:60.98:1212,0,61	1/1:5,27:32:66.23:1733,66,0	1/1:2,4:6:9.03:215,9,0
chr10	40310472	.	A	AGT	8879.59	PASS	AB=0.617;AC=51;AF=0.911;AN=56;BaseQRankSum=-0.507;DP=689;FS=7.098;HRun=0;HaplotypeScore=226.7143;InbreedingCoeff=0.6414;MQ=56.83;MQ0=4;MQRankSum=-3.253;QD=13.83;ReadPosRankSum=4.969;VQSLOD=3.3697;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:29:14.48:121,14,0	1/1:7,0:9:9:79,9,0	0/0:31,0:17:27.05:0,27,299	0/0:16,0:14:17.75:0,18,188	1/1:19,0:22:14.83:122,15,0	1/1:19,0:24:23.82:184,24,0	1/1:24,0:24:8.93:64,9,0	1/1:13,16:29:45.62:692,46,0	1/1:16,0:16:10.73:70,11,0	1/1:24,0:24:32.71:278,33,0	1/1:11,0:11:7.89:53,8,0	1/1:16,0:21:24.01:220,24,0	1/1:21,0:23:23.82:192,24,0	1/1:16,0:22:17.93:147,18,0	1/1:31,0:31:23.94:218,24,0	1/1:19,0:23:23.99:206,24,0	1/1:20,0:21:11.82:88,12,0	1/1:22,0:22:20.62:154,21,0	1/1:11,12:24:39:519,39,0	0/1:14,23:36:65.77:826,0,66	1/1:6,35:41:55.49:1334,55,0	1/1:29,1:39:30.63:246,31,0	1/1:17,0:26:32.93:283,33,0	1/1:18,1:22:11.58:78,12,0	1/1:7,15:22:6.94:577,7,0	1/1:8,16:24:25.67:704,26,0	1/1:8,24:31:25.46:812,25,0	1/1:0,18:18:39.13:613,39,0
chr10	40310861	.	G	GA	4650	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-5.276;DP=502;FS=5.263;HRun=7;HaplotypeScore=55.6522;InbreedingCoeff=0.9799;MQ=86.94;MQ0=0;MQRankSum=-2.184;QD=29.43;ReadPosRankSum=1.782;VQSLOD=5.5571;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,105,1002	1/1:1,3:4:9.03:109,9,0	0/0:21,0:22:41.53:0,42,371	0/0:14,0:14:30.50:0,31,284	1/1:2,13:15:39.52:453,40,0	0/0:19,0:19:48.07:0,48,463	0/0:21,0:21:48.05:0,48,458	0/0:29,0:29:69.08:0,69,654	0/0:17,0:17:47.99:0,48,441	1/1:2,16:18:48.15:580,48,0	1/1:3,6:9:15:165,15,0	0/0:20,0:20:51.07:0,51,492	0/0:16,0:16:48.07:0,48,458	0/0:17,0:17:48.08:0,48,463	1/1:3,16:19:42.13:507,42,0	1/1:2,17:19:28.20:618,28,0	1/1:6,36:42:99:1268,105,0	1/1:3,13:16:10.15:406,10,0	0/0:19,0:19:57.09:0,57,550	0/0:9,0:9:21.03:0,21,203	0/0:18,0:18:48.01:0,48,443	1/1:1,15:16:45.14:543,45,0	0/0:16,0:16:39.06:0,39,376	0/0:14,0:14:36.06:0,36,348	0/0:14,0:14:42.06:0,42,400	0/0:22,1:24:31.92:0,32,578	0/0:9,0:9:27.04:0,27,261	0/0:11,0:11:33.05:0,33,319
chr10	40313344	.	TC	T	14204.60	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=11.235;DP=696;FS=34.480;HRun=7;HaplotypeScore=116.1969;InbreedingCoeff=0.9998;MQ=72.31;MQ0=0;MQRankSum=-3.199;QD=25.41;ReadPosRankSum=4.252;VQSLOD=2.7889;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:78.24:0,78,968	1/1:0,14:14:33.07:336,33,0	0/0:20,0:20:47.89:0,48,538	0/0:12,0:13:35.82:0,36,401	1/1:3,24:27:60.13:612,60,0	0/0:25,0:25:75.19:0,75,913	0/0:32,0:32:81.26:0,81,1018	1/1:8,23:31:69.08:681,69,0	0/0:19,0:19:54.17:0,54,678	1/1:2,24:26:66.15:673,66,0	1/1:1,17:18:51.11:520,51,0	1/1:3,18:21:51.11:518,51,0	1/1:1,27:28:75.17:765,75,0	1/1:3,36:39:96.21:979,96,0	1/1:0,22:22:51.12:520,51,0	1/1:2,28:30:72.16:735,72,0	1/1:2,24:26:63.14:643,63,0	1/1:4,17:21:48.10:490,48,0	1/1:1,19:20:57.13:579,57,0	1/1:1,16:17:48.02:476,48,0	1/1:7,46:53:99:1255,123,0	1/1:1,29:30:84.19:857,84,0	1/1:3,15:18:45.10:459,45,0	1/1:3,30:33:75.17:765,75,0	1/1:0,24:24:69.16:704,69,0	1/1:4,29:33:87.15:877,87,0	1/1:1,17:18:45.10:459,45,0	1/1:1,9:10:30.07:305,30,0
chr10	40313580	.	A	AT	9583.30	PASS	AB=0.932;AC=19;AF=0.339;AN=56;BaseQRankSum=6.605;DP=786;FS=9.499;HRun=3;HaplotypeScore=100.7717;InbreedingCoeff=0.9292;MQ=85.05;MQ0=0;MQRankSum=-1.674;QD=33.28;ReadPosRankSum=0.252;VQSLOD=4.2400;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,141,1655	1/1:0,11:11:33.10:443,33,0	0/0:26,0:26:44.10:0,44,677	0/0:24,0:24:66.15:0,66,728	1/1:1,24:25:72.20:986,72,0	0/0:23,0:23:66.19:0,66,780	0/0:27,0:27:78.24:0,78,936	0/0:33,0:33:84.26:0,84,1008	0/0:30,0:30:84.24:0,84,995	1/1:5,20:25:66.19:884,66,0	1/1:3,12:15:38.97:502,39,0	0/0:27,0:27:78.24:0,78,935	0/0:33,0:33:93.25:0,93,1091	0/0:28,0:28:75.18:0,75,864	1/1:1,28:29:84.28:1176,84,0	1/1:0,49:49:99:2017,144,0	1/1:4,31:35:96.32:1344,96,0	1/1:0,32:32:87.29:1214,87,0	0/0:20,0:20:51.16:0,51,611	0/0:21,0:21:60.18:0,60,720	0/0:35,0:35:90.27:0,90,1080	1/1:2,24:26:72.24:1008,72,0	0/0:19,0:19:51.16:0,51,610	0/0:39,0:39:99:0,102,1224	0/0:25,0:25:72.20:0,72,850	0/1:38,3:41:8.72:9,0,1169	0/0:27,0:27:78.23:0,78,924	0/0:11,0:11:24.07:0,24,288
chr10	40315662	.	GTAGCAGCCATCCAACTGGGCTTCTC	G	6513.96	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.704;DP=775;FS=5.290;HRun=0;HaplotypeScore=484.5066;InbreedingCoeff=0.9912;MQ=85.65;MQ0=0;MQRankSum=-9.199;QD=103.40;ReadPosRankSum=3.403;VQSLOD=3.9590;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,129,14168	0/0:13,0:13:33.11:0,33,3172	0/0:28,0:29:87.29:0,87,5419	0/0:28,0:28:81.28:0,81,4354	0/0:24,0:24:66.23:0,66,6053	0/0:18,0:18:51.18:0,51,5009	0/0:29,0:29:87.30:0,87,9334	0/0:33,0:33:93.30:0,93,7213	0/0:33,0:33:99:0,99,9519	0/0:34,0:34:99:0,99,8973	0/0:22,0:22:60.21:0,60,5471	1/1:0,35:36:72.25:4846,72,0	0/0:36,0:36:99:0,102,9882	0/0:21,0:21:63.22:0,63,6119	0/0:30,0:30:90.31:0,90,9430	0/0:39,0:39:99:0,114,12130	0/0:45,0:45:99:0,135,14275	0/0:20,0:20:60.21:0,60,5969	0/0:29,0:29:87.28:0,87,6314	0/0:26,0:26:78.25:0,78,7151	0/0:49,0:49:99:0,144,14217	0/0:17,0:17:48.16:0,48,4171	1/1:0,12:13:18.06:933,18,0	1/1:0,14:14:14.97:735,15,0	0/0:15,0:15:45.15:0,45,4625	0/0:34,0:34:99:0,102,10771	0/0:26,0:26:75.24:0,75,7377	0/0:18,0:18:54.16:0,54,5721
chr10	40317248	.	G	GAGTC	2809.11	PASS	AC=6;AF=0.111;AN=54;BaseQRankSum=-6.120;DP=660;FS=8.430;HRun=0;HaplotypeScore=99.3955;InbreedingCoeff=0.9367;MQ=39.89;MQ0=101;MQRankSum=-1.631;QD=37.45;ReadPosRankSum=1.729;VQSLOD=3.5626;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:30:66.20:0,66,1187	0/0:11,0:11:24.08:0,24,420	0/0:12,0:1:2.99:0,3,24	./.	0/0:22,0:22:39.13:0,39,706	0/0:19,0:18:39.13:0,39,710	0/0:28,0:21:45.11:0,45,801	0/0:22,0:10:27.07:0,27,442	0/0:19,0:14:36.04:0,36,671	0/0:19,0:17:51.17:0,51,933	0/0:14,0:14:24.08:0,24,448	1/1:2,22:25:45.15:1194,45,0	0/0:29,0:25:57.15:0,57,1025	0/0:29,0:22:48.16:0,48,857	0/0:20,0:16:36.12:0,36,668	0/0:26,0:21:47.99:0,48,748	0/0:38,0:32:69.20:0,69,1228	0/0:20,0:20:51.13:0,51,915	0/0:16,0:12:36.08:0,36,589	0/0:32,0:32:90.31:0,90,1678	0/0:46,0:40:93.32:0,93,1734	0/0:24,0:24:51.10:0,51,946	1/1:2,14:16:21.07:558,21,0	1/1:2,29:28:44.89:1197,45,0	0/0:17,0:17:39.09:0,39,682	0/0:21,0:20:57.18:0,57,1013	0/0:29,0:26:54.19:0,54,1005	0/0:19,0:17:26.92:0,27,503
chr10	40318405	.	GT	G	7814.73	PASS	AB=0.920;AC=25;AF=0.446;AN=56;BaseQRankSum=17.455;DP=566;FS=0.319;HRun=2;HaplotypeScore=77.4616;InbreedingCoeff=0.9304;MQ=78.59;MQ0=1;MQRankSum=-3.617;QD=32.97;ReadPosRankSum=4.593;VQSLOD=4.7586;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:75.25:0,75,1122	1/1:0,6:6:18.06:234,18,0	0/0:15,0:14:30.05:0,30,397	0/0:23,0:21:57.64:0,58,791	1/1:1,14:15:42.14:545,42,0	0/0:22,0:22:66.21:0,66,966	0/0:25,0:25:75.22:0,75,1081	0/0:30,0:30:90.30:0,90,1347	0/0:27,0:27:81.24:0,81,1173	1/1:0,16:16:48.16:623,48,0	1/1:0,10:10:24.08:308,24,0	1/1:1,19:20:60.18:764,60,0	0/0:24,0:24:72.24:0,72,1076	0/0:23,0:23:69.23:0,69,1034	1/1:0,24:24:63.07:818,63,0	1/1:0,24:24:69.22:896,69,0	1/1:0,36:36:99:1284,99,0	1/1:0,21:21:60.19:778,60,0	0/0:19,0:19:57.19:0,57,854	0/0:10,0:10:30.10:0,30,447	0/0:52,0:52:99:0,150,2226	1/1:0,13:13:39.13:506,39,0	1/1:0,9:9:27.02:329,27,0	1/1:2,18:20:57.14:721,57,0	0/0:16,0:16:48.14:0,48,696	0/1:21,2:23:8.69:9,0,875	0/0:14,0:14:42.14:0,42,629	0/0:4,0:4:12.04:0,12,180
chr10	40322368	.	CAG	C	1439.32	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-0.017;DP=1064;FS=18.710;HRun=0;HaplotypeScore=238.2988;InbreedingCoeff=0.9990;MQ=61.97;MQ0=9;MQRankSum=-0.483;QD=31.98;ReadPosRankSum=-0.350;VQSLOD=2.3354;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,123,2007	0/0:11,0:11:27.09:0,27,457	0/0:54,0:25:31.55:0,32,729	0/0:75,0:54:40.31:0,40,823	0/0:37,0:37:94.56:0,95,1582	0/0:21,0:21:60.21:0,60,1027	0/0:28,0:28:66.21:0,66,1092	0/0:70,0:69:99:0,147,2397	0/0:28,0:28:57.18:0,57,946	0/0:46,0:46:99:0,126,2126	0/0:17,0:17:45.15:0,45,761	0/0:44,0:43:99:0,114,1885	1/1:0,14:14:42.14:551,42,0	1/1:11,20:30:78.25:1009,78,0	0/0:47,0:47:99:0,135,2311	0/0:40,0:40:99:0,105,1795	0/0:41,0:41:99:0,105,1742	0/0:26,0:26:66.21:0,66,1080	0/0:52,0:46:99:0,123,1954	0/0:27,0:27:66.20:0,66,1098	0/0:62,0:62:99:0,147,2478	0/0:41,0:41:99:0,101,1682	0/0:31,0:31:84.28:0,84,1405	0/0:36,0:36:75.20:0,75,1195	0/0:36,0:36:99:0,102,1684	0/0:51,0:51:99:0,141,2394	0/0:41,0:40:99:0,111,1798	0/0:10,0:10:30.10:0,30,508
chr10	40322399	.	AG	A	11993.16	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-3.546;DP=648;FS=12.692;HRun=9;HaplotypeScore=95.1863;InbreedingCoeff=0.9433;MQ=70.60;MQ0=3;MQRankSum=-6.337;QD=20.16;ReadPosRankSum=3.727;VQSLOD=4.2550;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,28:34:69.02:628,69,0	1/1:0,4:4:12.01:110,12,0	0/0:25,0:17:14.39:0,14,185	0/0:27,0:18:12.86:0,13,167	1/1:9,20:29:59.68:518,60,0	1/1:3,20:23:60.03:549,60,0	1/1:5,18:23:45.02:412,45,0	1/1:12,17:29:44.84:390,45,0	1/1:2,20:22:50.97:457,51,0	1/1:5,14:19:45.02:411,45,0	1/1:1,7:8:21.01:190,21,0	1/1:6,29:35:84.03:769,84,0	1/1:5,13:18:36.01:329,36,0	1/1:7,21:28:69.04:631,69,0	1/1:3,31:34:83.91:769,84,0	1/1:3,12:15:30:275,30,0	1/1:6,18:24:50.97:458,51,0	1/1:5,12:18:35:300,35,0	1/1:10,19:29:60:547,60,0	1/1:4,11:15:41.80:348,42,0	1/1:7,47:54:99:979,108,0	1/1:2,18:20:47.99:439,48,0	1/1:4,16:21:37.95:335,38,0	1/1:1,23:24:65.98:596,66,0	1/1:3,15:18:42.02:384,42,0	1/1:7,14:21:51:460,51,0	1/1:2,23:25:66.03:602,66,0	1/1:0,5:5:12.01:110,12,0
chr10	40323030	.	AGCGCGCGC	A	1806.67	PASS	AB=0.958;AC=8;AF=0.143;AN=56;BaseQRankSum=8.043;DP=386;FS=3.858;HRun=0;HaplotypeScore=129.9699;InbreedingCoeff=0.4818;MQ=61.72;MQ0=3;MQRankSum=-6.855;QD=27.37;ReadPosRankSum=1.773;VQSLOD=3.5121;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:17.70:0,18,489	0/0:7,0:7:5.98:0,6,220	0/0:8,0:6:2.50:0,2,9	0/1:10,0:7:71.14:85,0,71	0/0:10,0:10:8.24:0,8,333	0/0:19,0:19:39.13:0,39,1308	0/0:40,0:40:99:0,99,3400	0/0:16,0:16:39.60:0,40,1130	0/0:12,0:12:11.02:0,11,178	0/0:7,0:7:14.13:0,14,390	0/0:2,0:2:2.97:0,3,99	1/1:2,21:23:51.17:1323,51,0	0/1:10,0:10:12:12,0,444	0/0:5,0:3:5.99:0,6,49	0/0:11,0:11:18.02:0,18,577	0/0:21,0:20:21.04:0,21,326	0/0:30,0:29:51.65:0,52,1493	0/0:5,0:17:9.03:0,9,215	0/0:16,0:16:42.59:0,43,1200	0/0:2,0:2:3.01:0,3,100	0/0:38,0:38:63.84:0,64,1844	0/0:9,0:9:21.06:0,21,635	1/1:0,7:7:8.44:213,8,0	1/1:3,12:15:12.51:315,13,0	0/0:8,0:7:8.69:0,9,284	0/0:13,0:13:39.09:0,39,1397	0/0:10,0:9:15:0,15,409	0/0:5,0:5:6.02:0,6,260
chr10	40323041	.	G	GCA	1937.66	PASS	AB=0.808;AC=40;AF=0.833;AN=48;BaseQRankSum=-4.728;DP=438;FS=0.000;HRun=0;HaplotypeScore=148.9056;InbreedingCoeff=0.3969;MQ=48.90;MQ0=6;MQRankSum=1.305;QD=5.38;ReadPosRankSum=-3.704;VQSLOD=2.3132;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:17:3:25,3,0	1/1:7,0:7:5.72:46,6,0	./.	./.	1/1:14,0:14:3:25,3,0	0/1:9,15:23:22.13:123,0,22	1/1:29,7:36:18.84:584,19,0	1/1:22,0:20:23.76:162,24,0	./.	1/1:11,0:11:20.82:157,21,0	0/0:7,0:6:0.43:0,0,1	0/0:22,0:22:43:0,43,205	1/1:8,2:12:5.80:33,6,0	0/1:9,0:7:0.02:0,0,0	1/1:15,0:15:8.88:66,9,0	1/1:9,0:17:14.79:114,15,0	1/1:30,0:29:6.87:56,7,0	1/1:18,0:18:17.69:156,18,0	1/1:19,0:18:14.62:100,15,0	./.	1/1:35,0:35:8.45:61,8,0	1/1:15,0:14:3:25,3,0	1/1:7,0:7:2.47:7,2,0	0/0:14,0:14:5.45:0,5,33	1/1:13,0:12:2.59:23,3,0	1/1:19,0:16:20.76:160,21,0	1/1:13,0:12:11.82:84,12,0	1/1:6,0:6:5.97:50,6,0
chr10	40323059	.	ACACACACACACGCG	A	3650.26	PASS	AB=1.000;AC=20;AF=0.357;AN=56;BaseQRankSum=3.068;DP=479;FS=0.529;HRun=0;HaplotypeScore=195.4850;InbreedingCoeff=-0.1056;MQ=51.47;MQ0=7;MQRankSum=-1.686;QD=11.55;ReadPosRankSum=-2.738;VQSLOD=2.1557;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:17,0:17:40.73:41,0,159	0/0:8,0:8:9.46:0,9,347	0/1:13,0:8:1.24:1,0,235	0/1:17,0:6:9.93:10,0,58	0/1:17,0:17:73.85:74,0,225	0/0:28,0:27:39.13:0,39,1656	0/0:36,0:36:81.82:0,82,4004	0/0:23,0:20:35.40:0,35,1793	0/0:9,0:9:8.02:0,8,53	0/1:12,0:12:68.69:69,0,946	0/0:6,0:5:0.19:0,0,1	1/1:26,4:30:37.06:2078,37,0	0/0:11,0:11:12.51:0,13,320	0/0:11,0:9:6.57:0,7,180	0/1:17,0:17:0.67:1,0,559	0/1:14,0:13:99:109,0,133	0/1:25,0:24:99:112,0,675	0/1:18,0:18:88.73:89,0,682	0/0:20,0:18:11.83:0,12,1229	0/0:4,0:4:3:0,3,26	0/1:37,0:37:60.14:60,0,867	0/1:16,0:15:20.49:20,0,355	1/1:10,0:10:8.39:278,8,0	1/1:21,1:22:20.89:580,21,0	0/1:14,0:13:35.30:35,0,311	0/1:22,0:19:52.51:53,0,1452	0/1:15,0:14:41.82:42,0,462	0/0:7,0:7:12.02:0,12,416
chr10	40323061	.	ACACACACACGCG	A	4240.47	PASS	AB=1.000;AC=22;AF=0.393;AN=56;BaseQRankSum=1.351;DP=470;FS=3.108;HRun=0;HaplotypeScore=181.5286;InbreedingCoeff=-0.2737;MQ=50.35;MQ0=7;MQRankSum=-1.413;QD=12.15;ReadPosRankSum=-3.780;VQSLOD=3.0208;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:18,0:18:91.24:91,0,104	0/1:7,0:7:12.14:12,0,257	0/0:11,0:8:1.66:0,2,213	0/1:15,0:5:9.93:10,0,58	0/1:17,0:17:73.93:74,0,167	0/0:27,0:26:39.12:0,39,1313	0/0:35,0:35:71.93:0,72,3284	0/1:24,0:21:19.53:20,0,1276	0/0:8,0:8:5.03:0,5,30	0/1:12,0:12:99:105,0,740	0/0:6,0:5:0.19:0,0,1	1/1:16,13:29:61.25:2060,61,0	0/0:11,0:11:12.51:0,13,254	0/0:12,0:10:10.14:0,10,195	0/1:16,0:16:30.15:30,0,398	0/1:14,0:13:99:128,0,104	0/1:25,0:24:99:208,0,475	0/1:19,0:19:99:192,0,536	0/1:21,0:19:77.18:77,0,881	0/0:4,0:4:0.47:0,0,1	0/1:35,0:35:69.47:69,0,599	0/1:16,0:15:44.58:45,0,240	1/1:5,5:10:8.59:284,9,0	1/1:15,5:20:20.90:631,21,0	0/1:14,0:13:60.80:61,0,208	0/1:22,0:19:81.74:82,0,1117	0/1:15,0:14:61.71:62,0,326	0/0:7,0:7:8.60:0,9,319
chr10	40323069	.	ACGCG	A	5996.28	PASS	AB=1.000;AC=43;AF=0.768;AN=56;BaseQRankSum=-5.076;DP=481;FS=9.353;HRun=0;HaplotypeScore=144.4595;InbreedingCoeff=0.7559;MQ=56.30;MQ0=5;MQRankSum=-2.180;QD=15.99;ReadPosRankSum=0.193;VQSLOD=4.2265;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:19:12.03:171,12,0	1/1:7,0:7:4.41:96,4,0	0/0:12,0:9:8.11:0,8,218	0/1:16,0:9:1.43:1,0,128	1/1:17,0:17:9.50:135,10,0	0/0:22,0:23:13.16:0,13,161	0/0:35,0:35:44.27:0,44,710	1/1:22,0:19:16.07:203,16,0	0/0:9,0:9:5.92:0,6,32	1/1:14,0:14:20.54:311,21,0	1/1:7,0:6:3.41:41,3,0	1/1:32,0:32:81.27:1302,81,0	0/0:10,0:10:9.03:0,9,143	0/0:16,0:14:23.53:0,24,315	1/1:16,0:16:11.54:238,12,0	1/1:18,0:17:11.03:345,11,0	1/1:23,0:22:21.29:327,21,0	1/1:19,0:19:26.94:481,27,0	1/1:21,0:19:26.98:372,27,0	1/1:5,0:5:6.02:98,6,0	1/1:35,0:35:23.70:359,24,0	1/1:14,0:13:11.88:161,12,0	1/1:5,6:11:9.01:106,9,0	1/1:19,0:19:26.83:427,27,0	1/1:13,0:12:12.03:163,12,0	1/1:22,0:19:19.62:305,20,0	1/1:16,0:15:12.26:226,12,0	1/1:9,0:9:9.03:130,9,0
chr10	40325723	.	GGGGGTT	G	952.34	PASS	AB=1.000;AC=33;AF=0.717;AN=46;BaseQRankSum=-3.056;DP=109;FS=8.075;HRun=0;HaplotypeScore=31.9370;InbreedingCoeff=0.2915;MQ=95.93;MQ0=1;MQRankSum=-2.396;QD=15.12;ReadPosRankSum=-1.600;VQSLOD=0.2562;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:5,0:5:18.99:19,0,59	./.	0/0:17,0:9:20.20:0,20,211	0/0:17,0:10:4.58:0,5,210	./.	0/0:3,0:3:2.92:0,3,17	0/0:4,0:4:12.02:0,12,200	1/1:5,0:5:8.96:71,9,0	0/1:2,0:2:19.74:20,0,41	1/1:4,0:4:3.01:57,3,0	./.	1/1:3,0:3:6.88:54,7,0	1/1:0,1:1:3.01:51,3,0	1/1:3,0:3:8.99:103,9,0	1/1:4,0:4:11.88:99,12,0	1/1:3,0:3:5.99:74,6,0	1/1:2,0:2:5.98:46,6,0	1/1:4,0:3:2.74:12,3,0	1/1:1,0:1:3:27,3,0	./.	1/1:5,0:5:5.85:77,6,0	1/1:1,3:4:6.02:84,6,0	0/1:3,0:3:9.22:20,0,9	0/0:1,0:1:0.47:0,0,1	./.	1/1:3,3:6:6:93,6,0	1/1:3,4:7:11.04:161,11,0	1/1:1,0:1:2.99:24,3,0
chr10	40325741	.	GTT	G	251.18	PASS	AB=1.000;AC=21;AF=0.583;AN=36;BaseQRankSum=1.038;DP=63;FS=6.763;HRun=2;HaplotypeScore=21.8161;InbreedingCoeff=0.4162;MQ=104.19;MQ0=1;MQRankSum=-1.194;QD=10.92;ReadPosRankSum=2.803;VQSLOD=0.7820;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:1,0:1:0:0,0,0	./.	0/0:18,1:9:11.43:0,11,151	0/0:13,0:7:7.91:0,8,86	./.	./.	0/0:2,0:2:2.50:0,2,23	0/1:1,0:1:0:0,0,0	./.	1/1:0,1:1:3.01:38,3,0	./.	./.	1/1:1,0:1:2.94:18,3,0	1/1:0,1:1:3.01:35,3,0	1/1:1,2:3:6.02:75,6,0	1/1:0,1:1:3:25,3,0	./.	1/1:1,2:2:5.95:56,6,0	0/0:1,0:1:3:0,3,26	./.	1/1:4,0:4:2.13:15,2,0	1/1:1,1:2:5.89:37,6,0	./.	0/0:1,0:1:0:0,0,0	./.	1/1:2,0:2:2.92:17,3,0	1/1:3,1:4:6.63:47,7,0	0/0:1,0:1:2.60:0,3,10
chr10	40326548	.	G	GC	19923.69	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-13.754;DP=827;FS=0.000;HRun=3;HaplotypeScore=85.5405;InbreedingCoeff=0.9997;MQ=87.15;MQ0=0;MQRankSum=-4.247;QD=37.31;ReadPosRankSum=1.530;VQSLOD=5.0796;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,153,1808	1/1:0,11:11:30.10:420,30,0	0/0:27,0:27:65.77:0,66,712	0/0:29,0:29:72.01:0,72,771	1/1:1,23:24:63.21:882,63,0	0/0:16,0:16:45.14:0,45,540	0/0:39,0:39:99:0,117,1393	1/1:6,38:44:99:1567,114,0	0/0:24,0:24:69.21:0,69,826	1/1:2,30:32:84.28:1176,84,0	1/1:1,15:16:45.15:629,45,0	0/0:47,0:47:99:0,141,1680	1/1:2,28:30:81.23:1110,81,0	1/1:3,26:30:81.25:1111,81,0	1/1:2,36:38:99:1429,102,0	1/1:0,33:33:99:1387,99,0	1/1:0,47:47:99:1932,138,0	1/1:1,14:15:39.13:546,39,0	1/1:3,20:23:54.17:739,54,0	1/1:1,13:14:27.09:378,27,0	1/1:6,63:69:99:2311,166,0	1/1:0,25:25:72.24:1008,72,0	0/0:21,0:21:63.15:0,63,739	0/0:37,0:37:99:0,105,1259	1/1:0,14:14:39.13:545,39,0	1/1:1,32:33:96.30:1326,96,0	1/1:1,19:20:57.19:798,57,0	1/1:1,15:16:45.15:630,45,0
chr10	40327802	.	AAAAC	A	10813.24	PASS	AB=1.000;AC=35;AF=0.625;AN=56;BaseQRankSum=13.062;DP=611;FS=0.357;HRun=0;HaplotypeScore=108.0560;InbreedingCoeff=0.9111;MQ=71.38;MQ0=4;MQRankSum=-1.223;QD=29.30;ReadPosRankSum=3.721;VQSLOD=4.8545;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,102,2364	1/1:2,6:8:9.03:150,9,0	0/0:30,0:23:13.28:0,13,698	0/1:21,0:18:19.35:19,0,410	1/1:10,21:31:63.17:1005,63,0	0/0:27,0:26:57.20:0,57,1403	0/0:23,0:23:54.19:0,54,1310	1/1:11,10:21:30.07:447,30,0	0/0:27,0:27:66.21:0,66,1517	1/1:7,25:32:71.33:1139,71,0	1/1:4,20:24:54.04:808,54,0	0/0:21,0:21:48.16:0,48,1178	0/0:18,0:18:45.15:0,45,1066	0/0:17,0:17:45.14:0,45,1049	1/1:3,15:18:33.11:550,33,0	1/1:1,15:16:36.12:600,36,0	1/1:7,13:20:27.09:450,27,0	1/1:9,13:22:30.06:470,30,0	1/1:5,15:20:45.13:695,45,0	1/1:4,11:15:33.11:540,33,0	1/1:3,23:26:48.16:800,48,0	1/1:7,9:16:24.04:370,24,0	0/0:22,0:22:54.19:0,54,1269	0/0:16,0:16:45.15:0,45,1109	1/1:4,17:21:48.01:799,48,0	1/1:2,17:19:51.15:801,51,0	1/1:6,25:31:54.14:870,54,0	1/1:1,7:8:18.06:300,18,0
chr10	40328845	.	C	CT	1387.88	PASS	AB=0.657;AC=7;AF=0.125;AN=56;BaseQRankSum=-2.534;DP=617;FS=2.130;HRun=10;HaplotypeScore=68.8170;InbreedingCoeff=0.4880;MQ=73.43;MQ0=1;MQRankSum=-0.357;QD=12.17;ReadPosRankSum=0.217;VQSLOD=3.3886;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,3:30:69.28:391,69,0	0/0:8,0:8:20.97:0,21,172	0/0:14,0:16:8.76:0,9,121	0/0:9,0:10:21.68:0,22,131	0/0:23,0:23:59.84:0,60,482	1/1:2,17:19:42.11:448,42,0	0/1:4,15:19:10.19:313,0,10	0/1:19,5:24:9.30:9,0,271	0/1:6,15:21:25.75:368,0,26	0/0:23,0:25:51.96:0,52,402	0/0:15,0:15:35.53:0,36,281	0/0:23,0:23:55.96:0,56,449	0/0:20,1:21:30.94:0,31,460	0/0:29,0:29:68.88:0,69,566	0/0:27,0:27:24.93:0,25,411	0/0:22,0:22:56.91:0,57,468	0/0:38,1:40:65.85:0,66,727	0/0:23,0:23:59.93:0,60,493	0/0:23,1:25:2.16:0,2,362	0/0:17,0:17:29.92:0,30,246	0/0:34,0:34:86.84:0,87,711	0/0:14,0:14:32.93:0,33,268	0/0:16,0:17:22.39:0,22,309	0/0:20,1:26:30.09:0,30,410	0/0:20,0:20:29.90:0,30,245	0/0:27,0:27:53.80:0,54,437	0/0:21,0:22:37.54:0,38,419	0/0:16,0:18:49.02:0,49,381
chr10	40337878	.	AAGAGACTGGTGGGCACC	A	4760.98	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.599;DP=746;FS=6.552;HRun=0;HaplotypeScore=337.7804;InbreedingCoeff=0.9983;MQ=84.40;MQ0=0;MQRankSum=-9.768;QD=97.16;ReadPosRankSum=3.244;VQSLOD=3.6058;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,126,8108	0/0:10,0:10:27.09:0,27,1853	0/0:31,0:31:87.25:0,87,4312	0/0:19,0:20:41.55:0,42,2703	0/0:33,0:33:96.29:0,96,6734	0/0:23,0:23:69.22:0,69,4890	0/0:32,0:32:87.27:0,87,5988	0/0:32,0:32:96.32:0,96,6843	0/0:31,0:31:93.30:0,93,7267	0/0:39,0:39:99:0,108,7255	0/0:26,0:26:75.26:0,75,5276	0/0:29,0:29:87.27:0,87,6116	1/1:0,26:26:45.15:2233,45,0	1/1:0,23:23:54.19:2528,54,0	0/0:34,0:34:96.32:0,96,7233	0/0:24,0:24:72.25:0,72,5659	0/0:28,0:28:81.28:0,81,6374	0/0:19,0:19:54.19:0,54,3982	0/0:25,0:25:74.99:0,75,4400	0/0:23,0:23:69.24:0,69,4583	0/0:42,0:42:99:0,123,9457	0/0:25,0:25:72.23:0,72,4901	0/0:12,0:12:33.10:0,33,1848	0/0:28,0:28:81.23:0,81,6195	0/0:25,0:25:75.24:0,75,5365	0/0:29,0:29:87.30:0,87,6543	0/0:23,0:22:66.21:0,66,4360	0/0:9,0:9:24.01:0,24,1065
chr10	40339183	.	C	CTAGA	938.41	PASS	AB=0.895;AC=9;AF=0.161;AN=56;BaseQRankSum=1.911;DP=408;FS=3.521;HRun=0;HaplotypeScore=80.9979;InbreedingCoeff=-0.2246;MQ=43.53;MQ0=75;MQRankSum=-3.399;QD=10.09;ReadPosRankSum=-3.104;VQSLOD=1.2235;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:31:84.23:0,84,1483	0/1:9,1:10:60.73:61,0,262	0/0:29,0:4:6.69:0,7,130	0/0:29,0:8:21.04:0,21,344	0/0:12,0:12:16.30:0,16,283	0/0:31,0:25:48.16:0,48,866	0/0:30,0:30:87.23:0,87,1542	0/0:23,0:4:12.04:0,12,185	0/0:19,0:19:54.14:0,54,914	0/0:11,0:7:12.04:0,12,206	0/1:7,1:7:56.02:56,0,103	0/1:14,2:16:99:338,0,302	0/1:12,1:13:46.56:47,0,508	0/0:4,0:4:9.03:0,9,168	0/1:13,0:13:64.41:64,0,364	0/0:13,0:12:30.10:0,30,541	0/1:10,0:10:15.19:15,0,367	0/1:3,4:7:93.89:298,0,94	0/0:10,0:2:6.02:0,6,112	0/0:9,0:9:12.04:0,12,217	0/0:22,0:20:8.96:0,9,535	0/0:6,0:5:6.02:0,6,112	0/1:8,0:6:53.01:53,0,156	0/0:4,0:4:6.02:0,6,112	0/0:8,0:8:18.06:0,18,336	0/1:6,2:7:99:145,0,148	0/0:12,0:11:18.06:0,18,336	0/0:7,0:6:12.01:0,12,189
chr10	40339255	.	ATGGC	A	1026.42	PASS	AB=0.764;AC=14;AF=0.250;AN=56;BaseQRankSum=6.081;DP=380;FS=12.251;HRun=0;HaplotypeScore=74.9577;InbreedingCoeff=-0.3216;MQ=50.56;MQ0=53;MQRankSum=1.205;QD=6.54;ReadPosRankSum=-0.179;VQSLOD=0.9612;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:30:82.43:0,82,2103	0/1:4,6:10:75.37:100,0,75	0/0:33,0:3:9:0,9,153	0/0:29,0:2:5.89:0,6,70	0/1:5,6:10:65.93:220,0,66	0/0:20,0:16:33.11:0,33,899	0/0:13,0:13:27.09:0,27,715	0/0:12,0:4:8.50:0,8,250	0/0:13,0:13:36.06:0,36,906	0/1:3,3:5:69.44:69,0,155	0/1:9,0:9:4.90:5,0,483	0/0:15,0:15:39.07:0,39,989	0/1:7,2:9:96.34:96,0,235	0/0:13,0:13:32.58:0,33,922	0/1:4,9:12:39.37:39,0,320	0/1:8,7:15:37.65:38,0,401	0/1:8,0:8:9.48:9,0,320	0/0:11,0:11:26.56:0,27,754	0/0:7,0:6:18.06:0,18,504	0/1:3,5:8:99:203,0,150	0/1:7,11:18:97.70:98,0,309	0/1:3,8:11:99:252,0,227	0/0:5,0:4:12.03:0,12,276	0/0:6,0:6:15.05:0,15,419	0/0:13,0:13:33.11:0,33,923	0/1:17,0:16:5.37:5,0,1020	0/1:16,0:16:2.64:3,0,938	0/1:5,1:6:36.43:36,0,388
chr10	40340110	.	G	GCT	4995.55	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=1.303;DP=505;FS=16.642;HRun=0;HaplotypeScore=87.7026;InbreedingCoeff=0.8602;MQ=68.55;MQ0=11;MQRankSum=-2.405;QD=13.39;ReadPosRankSum=0.422;VQSLOD=3.1619;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:20:44.90:0,45,363	1/1:5,0:5:8.91:63,9,0	0/0:21,0:17:36:0,36,345	0/0:28,0:22:43.06:0,43,433	1/1:7,0:7:11.03:81,11,0	0/0:14,0:14:22.40:0,22,162	0/0:24,0:24:40.13:0,40,309	1/1:17,0:17:38.88:326,39,0	0/0:24,0:23:59.24:0,59,465	1/1:10,0:10:21.89:195,22,0	1/1:6,0:6:3:25,3,0	1/1:24,0:23:40.62:336,41,0	1/1:5,22:28:9.02:153,9,0	1/1:8,15:24:6.32:88,6,0	1/1:28,0:28:48.77:443,49,0	1/1:19,0:17:13.10:257,13,0	1/1:30,0:29:59.41:441,59,0	1/1:14,0:13:30.61:222,31,0	1/1:19,0:19:47.88:408,48,0	1/1:9,0:9:11.99:100,12,0	1/1:33,0:32:44.83:352,45,0	1/1:6,0:6:5.37:33,5,0	1/1:7,0:6:17.98:149,18,0	1/1:37,0:35:58.48:493,58,0	1/1:9,0:9:11.93:90,12,0	1/1:14,4:19:47:409,47,0	1/1:16,0:15:40.50:282,41,0	1/1:4,0:4:6.46:49,6,0
chr10	40340113	.	CTGTGTGTGTGTGTG	C	717.51	PASS	AB=1.000;AC=7;AF=0.146;AN=48;BaseQRankSum=2.889;DP=566;FS=1.363;HRun=0;HaplotypeScore=196.1561;InbreedingCoeff=0.6285;MQ=62.10;MQ0=14;MQRankSum=-3.575;QD=9.20;ReadPosRankSum=0.784;VQSLOD=2.6453;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:27:45.15:0,45,2345	./.	./.	./.	0/0:7,0:7:9.01:0,9,284	1/1:10,0:16:6.02:153,6,0	1/1:19,6:24:12.01:334,12,0	0/0:18,0:18:20.54:0,21,630	1/1:20,5:24:9.03:349,9,0	0/0:10,0:9:6.02:0,6,253	./.	0/0:28,0:27:15.05:0,15,768	0/0:29,0:28:9.84:0,10,489	0/0:25,0:24:15.52:0,16,794	0/0:31,0:31:17.89:0,18,855	0/0:26,0:23:6.02:0,6,234	0/0:33,0:32:37.01:0,37,1684	0/0:15,0:14:18.53:0,19,1068	0/0:19,0:19:4.26:0,4,191	0/0:10,0:10:6.02:0,6,185	0/0:38,0:36:6.49:0,6,293	0/0:10,0:10:6:0,6,205	0/1:12,0:10:0:0,0,0	0/0:37,0:35:18.06:0,18,926	0/0:16,0:16:6.02:0,6,278	0/0:26,0:26:45.15:0,45,2539	0/0:20,0:19:28.64:0,29,1318	0/0:5,0:5:8.96:0,9,154
chr10	40340163	.	G	GTC	4981	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-0.712;DP=534;FS=8.770;HRun=0;HaplotypeScore=113.3307;InbreedingCoeff=0.8674;MQ=61.26;MQ0=21;MQRankSum=0.397;QD=13.39;ReadPosRankSum=0.717;VQSLOD=4.3660;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:27:64.80:0,65,512	1/1:3,0:3:5.99:50,6,0	0/0:36,0:16:25.29:0,25,282	0/0:43,0:21:25.17:0,25,374	1/1:2,0:11:3.01:42,3,0	0/0:18,0:18:35.56:0,36,268	0/0:25,0:22:41.01:0,41,307	1/1:23,0:22:32.08:379,32,0	0/0:12,0:12:25.15:0,25,170	1/1:1,10:11:20.97:188,21,0	1/1:8,0:8:11.98:98,12,0	1/1:29,0:28:36.82:289,37,0	1/1:23,0:22:44.87:434,45,0	1/1:17,0:17:32.13:267,32,0	1/1:18,0:18:27.90:263,28,0	1/1:14,0:13:17.99:180,18,0	1/1:34,0:33:59.47:488,59,0	1/1:20,0:19:44.48:348,44,0	1/1:13,0:12:29.91:248,30,0	1/1:7,0:6:14.98:124,15,0	1/1:28,0:27:40.81:315,41,0	1/1:3,5:8:3.01:56,3,0	1/1:14,0:13:20.95:174,21,0	1/1:8,25:33:3.01:42,3,0	1/1:16,0:16:32.71:263,33,0	1/1:19,0:18:42.62:363,43,0	1/1:14,0:13:28.18:228,28,0	1/1:7,0:7:20.69:144,21,0
chr10	40340483	.	TTA	T	787.55	PASS	AB=0.500;AC=15;AF=0.536;AN=28;BaseQRankSum=7.368;DP=189;FS=0.000;HRun=0;HaplotypeScore=63.5610;InbreedingCoeff=0.7850;MQ=36.32;MQ0=41;MQRankSum=-5.816;QD=16.76;ReadPosRankSum=1.993;VQSLOD=3.5387;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:30:81.28:0,81,1624	./.	0/0:10,0:5:15.05:0,15,303	0/0:7,0:4:12.04:0,12,217	0/1:0,1:1:0:0,0,0	0/0:20,0:19:54.15:0,54,1033	0/0:14,0:11:33.08:0,33,624	./.	0/0:15,0:14:42.14:0,42,774	1/1:1,4:4:12.04:167,12,0	./.	./.	./.	./.	./.	./.	./.	./.	1/1:5,3:3:9.03:121,9,0	1/1:0,5:5:3.01:38,3,0	1/1:5,2:2:0.89:2,1,0	./.	./.	./.	./.	1/1:0,8:8:24.08:315,24,0	1/1:0,10:10:15.05:195,15,0	1/1:1,2:2:6.02:78,6,0
chr10	40340509	.	C	CCA	5665.89	PASS	AB=1.000;AC=43;AF=0.768;AN=56;BaseQRankSum=7.834;DP=259;FS=1.722;HRun=0;HaplotypeScore=88.4283;InbreedingCoeff=0.7257;MQ=68.39;MQ0=5;MQRankSum=-9.242;QD=39.35;ReadPosRankSum=-0.332;VQSLOD=6.1149;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:86.94:0,87,1351	1/1:0,1:1:3.01:61,3,0	0/0:19,0:13:29.20:0,29,531	0/0:16,0:12:33.11:0,33,506	1/1:1,6:7:12:202,12,0	0/0:18,0:18:48.16:0,48,782	0/0:17,0:15:45.10:0,45,701	1/1:5,5:5:18.03:293,18,0	0/0:15,0:15:42.14:0,42,684	1/1:0,6:6:18.06:364,18,0	1/1:0,5:5:15.05:281,15,0	1/1:6,0:6:10.53:65,11,0	0/1:10,0:9:27.79:34,0,28	1/1:7,0:7:0.92:88,1,0	1/1:0,10:10:27.09:546,27,0	1/1:0,6:6:18.06:364,18,0	1/1:0,7:7:12.01:203,12,0	1/1:2,1:3:5.99:82,6,0	1/1:0,6:5:15.05:304,15,0	1/1:0,8:8:24.05:445,24,0	1/1:0,4:4:9.03:182,9,0	1/1:1,3:4:12.04:225,12,0	1/1:4,0:4:0.47:1,0,0	1/1:5,0:5:11.80:58,12,0	1/1:0,4:4:9.03:182,9,0	1/1:0,13:13:39.08:714,39,0	1/1:0,14:14:39.13:787,39,0	1/1:0,3:3:9.03:182,9,0
chr10	40341184	.	G	GAAAA	9949.69	PASS	AB=1.000;AC=45;AF=0.804;AN=56;BaseQRankSum=-1.491;DP=662;FS=0.000;HRun=13;HaplotypeScore=136.0944;InbreedingCoeff=0.8578;MQ=76.01;MQ0=1;MQRankSum=-4.009;QD=19.10;ReadPosRankSum=-5.811;VQSLOD=1.3277;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:45:71.50:0,71,583	1/1:1,0:7:11.90:110,12,0	0/0:26,0:23:16.94:0,17,165	0/1:19,0:18:19.34:19,0,156	1/1:13,8:24:45.26:703,45,0	0/0:14,0:16:38.94:0,39,464	0/0:22,0:29:56.67:0,57,634	1/1:22,7:37:69.27:1228,69,0	0/0:22,0:25:50.65:0,51,586	1/1:5,1:14:30.06:358,30,0	1/1:5,1:12:19.43:160,19,0	1/1:13,0:34:44.89:527,45,0	1/1:9,0:20:24.08:327,24,0	1/1:8,0:26:19.61:254,20,0	1/1:7,13:27:36.04:669,36,0	1/1:21,11:38:31.88:528,32,0	1/1:9,14:29:22.63:410,23,0	1/1:3,0:23:20.98:258,21,0	1/1:13,3:16:30.02:543,30,0	1/1:3,8:12:27.09:452,27,0	1/1:11,17:28:25.90:498,26,0	1/1:9,0:15:36.01:540,36,0	1/1:6,0:18:14.65:120,15,0	1/1:13,0:29:25.71:246,26,0	1/1:7,1:16:17.90:200,18,0	1/1:9,5:22:51.06:858,51,0	1/1:21,13:42:46.90:768,47,0	1/1:4,1:9:9.03:170,9,0
chr10	40341794	.	G	GAAAAC	30598.44	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-9.407;DP=828;FS=4.841;HRun=0;HaplotypeScore=139.5972;InbreedingCoeff=0.9848;MQ=67.27;MQ0=0;MQRankSum=-4.224;QD=43.71;ReadPosRankSum=2.003;VQSLOD=5.1051;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:47:51.17:1072,51,0	1/1:6,7:13:18.06:519,18,0	0/0:23,0:21:38.63:0,39,610	0/0:25,0:24:21.94:0,22,482	1/1:11,14:28:51.09:1221,51,0	0/0:27,0:27:63.22:0,63,1176	0/0:29,0:29:57.12:0,57,931	1/1:23,13:40:13.85:1236,14,0	0/0:23,0:23:57.20:0,57,1063	1/1:7,23:32:75.26:1810,75,0	1/1:7,12:21:33.07:787,33,0	1/1:15,28:45:66.23:1837,66,0	1/1:15,25:40:72.25:2024,72,0	1/1:12,24:36:46.26:1821,46,0	1/1:7,20:27:45.15:1281,45,0	1/1:12,25:38:57.20:1586,57,0	1/1:11,24:37:69.24:1971,69,0	1/1:9,32:44:81.28:2297,81,0	1/1:6,7:14:27.06:610,27,0	1/1:5,17:23:54.15:1335,54,0	1/1:11,17:29:39.13:1094,39,0	1/1:12,15:30:33:717,33,0	1/1:9,13:24:39.97:994,40,0	1/1:5,28:35:69.23:1898,69,0	1/1:5,15:21:36.12:969,36,0	1/1:14,15:32:26.17:1368,26,0	1/1:8,26:34:66.23:1806,66,0	1/1:3,4:9:12.04:346,12,0
chr10	40341950	.	GA	G	14475.98	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=12.066;DP=618;FS=1.768;HRun=2;HaplotypeScore=62.2506;InbreedingCoeff=0.9999;MQ=88.81;MQ0=0;MQRankSum=-3.780;QD=36.46;ReadPosRankSum=1.868;VQSLOD=5.5069;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:93.17:0,93,1319	1/1:0,19:19:57.19:740,57,0	0/0:25,0:25:69.23:0,69,1021	0/0:22,0:22:54.53:0,55,712	1/1:0,22:22:66.21:856,66,0	0/0:21,0:21:63.21:0,63,944	0/0:28,0:28:84.28:0,84,1258	1/1:2,35:37:99:1310,102,0	0/0:21,0:21:60.19:0,60,878	1/1:0,18:18:54.18:701,54,0	1/1:0,14:14:42.14:545,42,0	0/0:22,0:22:66.22:0,66,989	1/1:0,22:22:63.20:815,63,0	1/1:0,21:21:60.20:779,60,0	1/1:0,26:26:69.22:896,69,0	1/1:0,20:20:57.19:740,57,0	1/1:0,18:18:45.15:584,45,0	1/1:0,27:27:81.26:1052,81,0	1/1:0,19:19:54.14:670,54,0	1/1:0,20:20:57.10:702,57,0	1/1:1,18:19:45.15:584,45,0	1/1:1,13:14:30.10:387,30,0	0/0:24,0:24:72.24:0,72,1078	0/0:22,0:22:63.16:0,63,899	1/1:0,15:15:45.15:584,45,0	1/1:0,21:21:63.20:818,63,0	1/1:0,30:30:90.29:1168,90,0	1/1:0,15:15:42.14:545,42,0
chr10	40342822	.	T	TG	4497.86	PASS	AB=0.902;AC=31;AF=0.554;AN=56;BaseQRankSum=4.255;DP=555;FS=7.272;HRun=1;HaplotypeScore=101.1023;InbreedingCoeff=0.3806;MQ=35.78;MQ0=131;MQRankSum=-2.937;QD=12.29;ReadPosRankSum=0.814;VQSLOD=3.1898;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:19:23.89:0,24,294	0/1:10,2:7:23.05:150,0,23	0/0:18,0:5:12.04:0,12,152	0/0:23,0:10:30.10:0,30,381	1/1:14,2:13:36.12:473,36,0	0/0:24,0:21:36.89:0,37,422	0/0:35,0:30:53.77:0,54,636	0/1:24,0:16:48.32:284,0,48	0/0:25,0:19:36.59:0,37,461	0/1:9,6:5:41.88:109,0,42	1/1:9,5:10:21.07:290,21,0	0/1:18,1:9:2.09:2,0,8	0/0:17,0:12:19.52:0,20,158	0/0:20,0:11:18.96:0,19,165	1/1:8,10:15:19.61:230,20,0	1/1:19,4:15:3.37:475,3,0	1/1:27,3:20:30.01:400,30,0	0/1:16,10:20:12.50:251,0,13	1/1:12,0:4:10.85:125,11,0	1/1:14,0:7:18.05:239,18,0	1/1:41,3:20:21.65:249,22,0	0/1:17,1:10:45.59:252,0,46	0/1:10,0:8:1.75:14,0,2	0/1:27,0:19:8.85:54,0,9	1/1:7,1:5:12.04:163,12,0	1/1:16,1:10:24.08:327,24,0	1/1:7,0:5:12.04:153,12,0	0/1:11,1:8:14.06:257,0,14
chr10	40342823	.	GT	G	4184.86	PASS	AB=0.824;AC=31;AF=0.554;AN=56;BaseQRankSum=4.158;DP=558;FS=5.241;HRun=1;HaplotypeScore=102.2556;InbreedingCoeff=0.3693;MQ=35.10;MQ0=131;MQRankSum=-2.599;QD=11.43;ReadPosRankSum=-0.003;VQSLOD=1.7532;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:20:23.60:0,24,294	0/1:9,3:7:24.03:128,0,24	0/0:16,0:4:12.04:0,12,152	0/0:23,0:10:30.10:0,30,381	1/1:7,10:14:36.12:473,36,0	0/0:25,0:21:36.37:0,36,399	0/0:35,0:29:55.19:0,55,639	0/1:11,12:15:54.45:283,0,54	0/0:26,0:20:39.60:0,40,507	0/1:14,2:5:48.66:81,0,49	1/1:10,5:10:21.01:243,21,0	0/1:19,0:9:2.23:2,0,9	0/0:17,0:12:19.63:0,20,193	0/0:21,0:11:19.45:0,19,184	1/1:17,1:15:19.50:193,19,0	1/1:10,12:15:3.57:459,4,0	1/1:16,13:18:30.05:381,30,0	0/1:21,5:20:15.68:252,0,16	1/1:6,6:5:10.85:125,11,0	1/1:5,9:7:17.98:183,18,0	1/1:32,13:21:21.65:249,22,0	0/1:9,9:10:34.61:252,0,35	0/1:10,0:8:2.85:13,0,3	0/1:25,2:19:16.25:16,0,31	1/1:4,4:5:11.87:132,12,0	1/1:6,10:9:27.03:327,27,0	1/1:1,6:5:12.02:135,12,0	0/1:5,7:8:13.73:255,0,14
chr10	40342826	.	T	TG	518.05	PASS	AB=0.957;AC=13;AF=0.232;AN=56;BaseQRankSum=1.994;DP=555;FS=1.342;HRun=1;HaplotypeScore=116.2062;InbreedingCoeff=0.4759;MQ=33.95;MQ0=136;MQRankSum=-2.577;QD=3.03;ReadPosRankSum=1.278;VQSLOD=-0.0028;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:19:20.08:0,20,265	0/0:13,0:8:13.81:0,14,103	0/0:11,0:3:9.03:0,9,114	0/0:19,0:8:21.05:0,21,252	0/0:18,0:14:30.86:0,31,119	0/0:25,0:20:36.89:0,37,422	0/0:36,0:29:50.76:0,51,599	0/1:23,0:15:3.88:4,0,120	0/0:26,0:20:39.57:0,40,483	0/0:19,0:7:17.96:0,18,169	0/0:15,0:10:19:0,19,121	1/1:19,0:9:11.71:34,12,0	0/1:13,5:12:9.76:242,0,10	1/1:21,1:11:14.83:279,15,0	0/1:16,0:12:11.46:11,0,79	0/0:22,0:15:31:0,31,136	0/0:28,0:17:19.26:0,19,94	0/1:26,0:20:8.84:9,0,120	0/0:11,0:5:10.80:0,11,63	0/0:13,0:6:13.25:0,13,100	0/0:45,0:21:16.68:0,17,61	0/0:18,0:10:24.34:0,24,145	1/1:11,0:9:11.34:39,11,0	1/1:29,0:19:8.36:45,8,0	0/0:10,0:6:10.41:0,10,66	0/0:15,0:8:19.23:0,19,85	0/1:7,0:5:19.16:19,0,31	0/0:12,0:8:21.54:0,22,114
chr10	40342827	.	GT	G	466.72	PASS	AB=0.965;AC=12;AF=0.214;AN=56;BaseQRankSum=2.061;DP=564;FS=0.000;HRun=1;HaplotypeScore=114.7407;InbreedingCoeff=0.3023;MQ=32.87;MQ0=146;MQRankSum=-2.051;QD=2.75;ReadPosRankSum=1.056;VQSLOD=-0.4421;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:19:19.82:0,20,274	0/0:13,0:8:13.40:0,13,115	0/0:9,0:3:9.03:0,9,114	0/0:18,0:7:21.05:0,21,252	0/0:19,0:14:30.86:0,31,119	0/0:24,0:19:36.37:0,36,399	0/0:39,0:30:52.18:0,52,601	0/1:22,0:14:3.22:3,0,126	0/0:27,0:20:39.55:0,40,489	0/0:20,0:7:20.98:0,21,221	0/0:16,0:11:19:0,19,143	1/1:20,0:9:11.86:34,12,0	0/1:14,5:12:22.39:202,0,22	1/1:11,10:10:19.89:276,20,0	0/1:16,0:12:11.44:11,0,93	0/0:25,0:15:28.98:0,29,138	0/0:27,0:15:21.98:0,22,138	0/1:25,0:19:9.56:10,0,159	0/0:12,0:5:10.80:0,11,63	0/0:13,0:6:14.05:0,14,123	0/0:45,0:21:19.82:0,20,76	0/0:19,0:10:3.50:0,3,118	0/1:11,0:9:14.11:26,0,14	1/1:29,0:19:3.98:40,4,0	0/0:10,0:6:10.22:0,10,76	0/0:16,0:8:21.99:0,22,141	0/1:7,0:5:19.05:19,0,34	0/0:12,0:8:21.54:0,22,113
chr10	40342852	.	TG	T	1618.55	PASS	AB=0.818;AC=26;AF=0.500;AN=52;BaseQRankSum=4.081;DP=625;FS=1.246;HRun=2;HaplotypeScore=150.9185;InbreedingCoeff=-0.5152;MQ=27.21;MQ0=146;MQRankSum=-1.261;QD=2.96;ReadPosRankSum=-2.322;VQSLOD=-0.7593;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:28,5:16:12.34:18,0,12	0/1:7,3:6:0:0,0,0	./.	./.	0/1:14,10:18:22.97:23,0,34	0/1:16,1:8:16.50:63,0,17	0/0:36,0:19:12.08:0,12,70	0/0:25,0:14:34.91:0,35,472	0/1:20,1:12:7.32:7,0,44	0/1:26,3:16:68.67:69,0,285	0/1:12,5:13:4.14:4,0,5	0/1:25,4:18:49.20:49,0,80	0/1:13,8:17:97.24:97,0,119	0/1:17,10:21:45.75:156,0,46	1/1:19,6:18:4.34:31,4,0	0/1:21,9:17:9.35:143,0,9	0/1:24,7:21:99:182,0,105	0/1:20,6:20:80.83:195,0,81	0/1:16,1:7:25.27:25,0,141	0/1:13,4:12:30.14:38,0,30	0/1:49,4:32:25.73:26,0,65	0/1:18,6:17:41.12:44,0,41	0/1:10,6:12:22.08:22,0,32	1/1:30,5:22:5.59:53,6,0	0/0:11,7:12:0.30:0,0,13	0/1:15,8:14:72.94:295,0,73	0/1:6,3:8:61.48:104,0,61	1/1:6,6:9:8.77:118,9,0
chr10	40342860	.	GT	G	386.04	PASS	AB=0.967;AC=14;AF=0.269;AN=52;BaseQRankSum=-1.015;DP=652;FS=104.654;HRun=3;HaplotypeScore=162.5458;InbreedingCoeff=-0.1745;MQ=26.98;MQ0=158;MQRankSum=3.367;QD=1.14;ReadPosRankSum=1.717;VQSLOD=-0.6310;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:34,1:18:11.23:34,11,0	0/1:11,0:7:0:0,0,0	./.	./.	0/1:24,0:18:19.22:19,0,33	0/0:20,0:10:8.59:0,9,61	0/0:36,0:21:26.33:0,26,158	0/0:24,0:13:36.12:0,36,471	0/0:19,0:11:6.97:0,7,163	0/1:27,1:16:65.22:65,0,220	0/0:16,0:13:5.35:0,5,59	0/0:35,0:22:14.06:0,14,107	0/0:24,0:19:28.16:0,28,259	0/0:27,0:21:16.16:0,16,105	0/0:23,0:16:4.65:0,5,18	0/1:30,1:17:61.81:65,0,62	0/1:35,0:24:42.22:42,0,232	0/1:25,2:20:45.23:45,0,103	0/1:21,1:10:7.34:7,0,206	0/1:18,0:11:11.05:11,0,44	0/1:52,1:32:48.32:48,0,106	0/1:22,0:16:17.99:18,0,65	0/0:19,0:15:9.46:0,9,86	0/0:35,0:22:2.84:0,3,9	0/0:16,1:11:1.76:0,2,4	0/1:21,2:16:99:124,0,170	0/1:9,1:9:48.22:48,0,88	0/0:13,0:9:2.30:0,2,79
chr10	40342862	.	TTGTGTGTGTG	T	1511.81	PASS	AB=0.978;AC=32;AF=0.640;AN=50;BaseQRankSum=-1.693;DP=652;FS=26.841;HRun=0;HaplotypeScore=183.2949;InbreedingCoeff=0.1032;MQ=27.28;MQ0=158;MQRankSum=-0.832;QD=3.04;ReadPosRankSum=-0.564;VQSLOD=0.8108;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:20:23.70:0,24,279	1/1:11,0:7:0.89:2,1,0	./.	./.	1/1:23,0:17:5.09:95,5,0	1/1:20,0:10:0.12:4,0,0	1/1:38,0:21:1.45:7,1,0	./.	0/0:20,0:11:3.48:0,3,49	0/1:27,0:17:94.06:94,0,236	0/1:16,0:13:38.04:38,0,64	0/1:34,0:21:11.41:19,0,11	0/1:24,0:19:7.12:64,0,7	1/1:27,0:21:3.01:70,3,0	1/1:20,3:16:13.87:106,14,0	1/1:31,0:16:9.83:249,10,0	1/1:31,5:25:14.87:289,15,0	0/1:25,0:21:1.41:91,0,1	0/1:22,0:11:13.92:14,0,40	1/1:18,0:11:2.18:8,2,0	0/1:53,0:33:26.63:27,0,130	1/1:21,0:15:8.28:150,8,0	0/0:17,0:13:4.66:0,5,29	0/0:37,0:24:5.93:0,6,55	0/0:18,0:11:5.77:0,6,31	1/1:24,0:15:14.75:234,15,0	1/1:8,0:8:7.70:76,8,0	0/1:11,0:8:23.44:23,0,71
chr10	40343585	.	A	AC	11859.23	PASS	AB=1.000;AC=45;AF=0.804;AN=56;BaseQRankSum=-8.531;DP=638;FS=3.595;HRun=7;HaplotypeScore=71.8094;InbreedingCoeff=0.8202;MQ=82.89;MQ0=5;MQRankSum=-1.049;QD=23.53;ReadPosRankSum=1.950;VQSLOD=5.3394;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:90.79:0,91,1046	1/1:0,6:6:15.05:181,15,0	0/0:34,0:23:0.85:0,1,157	0/1:32,0:26:18.42:18,0,114	1/1:2,27:29:72.21:854,72,0	0/0:24,0:24:66.09:0,66,630	0/0:23,0:23:51.08:0,51,492	1/1:5,21:26:60.15:697,60,0	0/0:13,0:13:39.05:0,39,370	1/1:6,19:25:57.16:675,57,0	1/1:1,12:13:20.79:249,21,0	1/1:5,22:27:51.16:616,51,0	1/1:1,2:20:34.26:196,34,0	1/1:4,0:21:34.64:197,35,0	1/1:4,23:27:63.19:761,63,0	1/1:5,24:29:62.93:761,63,0	1/1:1,18:19:42.13:507,42,0	1/1:1,28:29:75.23:906,75,0	1/1:7,11:18:30.07:348,30,0	1/1:3,20:23:51.16:615,51,0	1/1:4,29:33:77.91:917,78,0	1/1:7,12:19:36.11:433,36,0	1/1:3,15:18:13.17:442,13,0	1/1:4,16:20:39.12:471,39,0	1/1:3,20:23:48.15:579,48,0	1/1:2,16:18:51.16:612,51,0	1/1:6,16:22:54.15:641,54,0	1/1:0,7:7:15.05:181,15,0
chr10	40344144	.	AATG	A	454.02	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=1.231;DP=506;FS=0.778;HRun=0;HaplotypeScore=100.5578;InbreedingCoeff=0.9821;MQ=77.50;MQ0=12;MQRankSum=-1.671;QD=20.64;ReadPosRankSum=0.276;VQSLOD=3.2465;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:16,6:21:52.82:549,53,0	0/0:7,0:7:21.04:0,21,274	0/0:35,0:19:54.46:0,54,527	0/0:30,0:23:57.71:0,58,563	0/0:11,0:11:33.09:0,33,623	0/0:17,0:16:44.54:0,45,591	0/0:23,0:23:69.10:0,69,1123	0/0:26,0:26:66.72:0,67,778	0/0:13,0:13:39.08:0,39,689	0/0:15,0:15:32.34:0,32,705	0/0:8,0:8:24.03:0,24,372	0/0:22,0:22:53.11:0,53,934	0/0:13,0:13:38.99:0,39,567	0/0:18,0:18:54.07:0,54,827	0/0:17,0:17:51.07:0,51,814	0/0:16,0:16:48.11:0,48,843	0/0:25,0:24:47.77:0,48,1109	0/0:27,0:27:80.99:0,81,1225	0/0:17,0:17:51.05:0,51,647	0/0:12,0:12:29.55:0,30,423	0/0:40,0:40:99:0,117,1516	0/0:13,0:13:38.96:0,39,534	0/0:7,0:7:17.99:0,18,257	0/0:24,0:24:70.90:0,71,1051	0/0:15,0:15:44.97:0,45,573	0/0:13,0:13:39.03:0,39,529	0/0:12,0:12:30.37:0,30,463	0/0:8,0:8:24.02:0,24,312
chr10	40344505	.	C	CT	154.39	PASS	AB=0.804;AC=2;AF=0.167;AN=12;BaseQRankSum=-1.573;DP=214;FS=0.000;HRun=14;HaplotypeScore=100.6829;MQ=101.67;MQ0=17;MQRankSum=0.379;QD=1.82;ReadPosRankSum=0.363;VQSLOD=-0.2170;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:10,18:27:18.80:218,0,19	./.	0/0:62,0:26:11.10:0,11,84	0/1:55,0:26:8.75:9,0,25	./.	0/0:15,0:18:3.63:0,4,123	0/0:15,0:18:29.62:0,30,170	./.	0/0:19,0:21:33.48:0,33,202	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.
chr10	40344590	.	A	AG	101.22	PASS	AC=8;AF=0.400;AN=20;BaseQRankSum=3.789;DP=155;FS=29.234;HRun=0;HaplotypeScore=49.7598;InbreedingCoeff=0.7844;MQ=84.20;MQ0=17;MQRankSum=0.322;QD=10.12;ReadPosRankSum=-4.230;VQSLOD=1.1158;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:87.28:0,87,1185	./.	0/0:14,0:11:29.89:0,30,336	0/0:19,0:13:35.85:0,36,420	./.	0/0:11,0:11:33.11:0,33,460	0/0:30,0:30:84:0,84,1012	./.	0/0:23,0:23:63.05:0,63,858	./.	./.	1/1:0,3:3:9.03:113,9,0	./.	1/1:1,0:1:2.99:24,3,0	./.	./.	1/1:3,0:2:5.97:45,6,0	./.	./.	./.	./.	./.	./.	./.	1/1:2,0:1:2.99:24,3,0	./.	./.	./.
chr10	40345945	.	A	ACCTTCTCCCTCCACATCTGGCCACTCC	8666.75	PASS	AB=1.000;AC=14;AF=0.250;AN=56;BaseQRankSum=-10.052;DP=581;FS=0.474;HRun=0;HaplotypeScore=414.2827;InbreedingCoeff=0.2239;MQ=73.82;MQ0=0;MQRankSum=-6.966;QD=37.20;ReadPosRankSum=-4.182;VQSLOD=1.2334;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:14.33:0,14,3448	0/0:3,0:3:9.03:0,9,505	0/0:16,0:16:39.12:0,39,1124	0/0:24,0:24:30.68:0,31,1572	0/0:6,0:6:18.06:0,18,950	0/0:14,0:14:0.07:0,0,889	0/0:33,0:33:15.33:0,15,2212	0/1:21,0:21:71.82:72,0,773	0/0:26,0:26:17.20:0,17,3055	0/0:16,0:16:42.14:0,42,1837	0/1:8,0:8:26.11:26,0,594	1/1:14,4:39:56.76:4619,57,0	0/0:20,0:20:54.15:0,54,2303	0/0:30,0:30:78.26:0,78,3970	0/1:19,0:19:4.93:5,0,2157	0/0:20,0:20:42.14:0,42,2393	0/0:24,0:24:35.21:0,35,2901	0/0:34,0:34:6.62:0,7,3230	0/1:20,0:20:64.20:64,0,1091	0/1:10,0:10:1.95:2,0,420	0/1:34,0:34:16.73:17,0,3151	0/0:10,0:10:21.07:0,21,1273	1/1:10,1:19:16.65:1164,17,0	1/1:16,1:18:30.10:2665,30,0	0/1:16,0:16:13.87:14,0,1402	0/1:29,0:29:18.65:19,0,3915	0/0:20,0:20:22.16:0,22,2340	0/0:11,0:11:27.09:0,27,876
chr10	40345994	.	A	ACTGC	29545.53	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=-5.476;DP=616;FS=1.208;HRun=0;HaplotypeScore=113.3075;InbreedingCoeff=0.9797;MQ=71.24;MQ0=0;MQRankSum=-5.933;QD=62.60;ReadPosRankSum=2.168;VQSLOD=6.9876;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,38:45:96.29:2495,96,0	1/1:1,5:6:18.02:419,18,0	0/0:16,0:16:42.14:0,42,752	0/0:19,0:19:51.13:0,51,895	1/1:1,8:12:24.08:639,24,0	1/1:3,16:19:48.16:1262,48,0	1/1:5,34:42:99:2650,102,0	1/1:4,20:25:69.21:1724,69,0	1/1:2,19:22:60.21:1598,60,0	1/1:5,16:22:56.93:1373,57,0	1/1:2,6:8:18.06:469,18,0	0/0:33,0:33:81.22:0,81,1455	0/0:21,0:21:57.14:0,57,1019	0/0:24,0:24:66.20:0,66,1156	1/1:4,30:35:84.29:2235,84,0	1/1:4,20:26:66.23:1743,66,0	1/1:2,33:38:93.32:2479,93,0	1/1:2,21:27:60.21:1599,60,0	1/1:11,15:31:84.13:1752,84,0	1/1:1,6:8:24.04:579,24,0	1/1:3,26:30:66.23:1760,66,0	1/1:1,4:6:8.96:239,9,0	0/0:12,0:12:24.08:0,24,428	0/0:19,0:19:51.03:0,51,872	1/1:3,12:16:33.11:879,33,0	1/1:2,29:33:93.25:2296,93,0	1/1:2,15:17:39.13:1035,39,0	1/1:0,4:4:12.04:320,12,0
chr10	40348147	.	A	AC	1849.75	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-7.660;DP=650;FS=1.112;HRun=7;HaplotypeScore=67.2496;InbreedingCoeff=0.9993;MQ=61.90;MQ0=0;MQRankSum=1.601;QD=27.20;ReadPosRankSum=0.604;VQSLOD=4.3329;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,99,955	0/0:12,0:12:33.02:0,33,310	0/0:18,0:15:29.94:0,30,269	0/0:15,0:15:27.04:0,27,258	0/0:19,0:19:45.06:0,45,434	0/0:19,0:19:51.08:0,51,492	0/0:33,0:33:72.53:0,73,764	0/0:24,0:24:60.06:0,60,569	0/0:14,0:14:42.07:0,42,406	0/0:31,0:31:75.09:0,75,716	0/0:13,0:13:39.06:0,39,373	1/1:0,25:25:66.20:797,66,0	0/0:24,0:24:69.11:0,69,666	0/0:21,0:21:60.08:0,60,573	0/0:33,0:33:84.13:0,84,811	0/0:30,0:30:84.11:0,84,804	0/0:28,0:28:72.08:0,72,683	0/0:24,0:24:63.09:0,63,608	0/0:14,0:14:39.05:0,39,373	0/0:23,0:23:63:0,63,584	0/0:26,0:26:69.05:0,69,653	0/0:19,0:19:48.07:0,48,463	1/1:1,21:22:51.12:616,51,0	1/1:3,18:21:48.15:580,48,0	0/0:26,0:26:68.70:0,69,647	0/0:26,0:26:72.08:0,72,684	0/0:28,0:28:81.11:0,81,775	0/0:21,0:21:57.03:0,57,535
chr10	40351883	.	ATG	A	13482.64	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=11.179;DP=615;FS=5.592;HRun=0;HaplotypeScore=78.7788;InbreedingCoeff=0.9963;MQ=92.68;MQ0=0;MQRankSum=-3.411;QD=41.49;ReadPosRankSum=3.819;VQSLOD=6.9393;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:78.25:0,78,1456	1/1:0,10:10:27.09:413,27,0	0/0:22,0:22:66.23:0,66,1253	0/0:30,0:30:78.26:0,78,1373	1/1:0,6:6:18.06:276,18,0	0/0:17,0:17:51.16:0,51,952	0/0:36,0:36:99:0,108,2028	1/1:2,24:26:72.24:1103,72,0	0/0:26,0:26:75.26:0,75,1449	1/1:1,14:15:42.14:643,42,0	1/1:0,6:6:18.06:275,18,0	0/0:33,0:33:96.33:0,96,1854	0/0:22,0:22:63.22:0,63,1203	0/0:31,0:31:90.31:0,90,1723	1/1:1,26:27:75.25:1149,75,0	1/1:0,22:22:60.20:919,60,0	1/1:2,32:34:93.32:1424,93,0	1/1:1,36:37:99:1562,102,0	1/1:0,20:20:60.18:894,60,0	1/1:1,14:15:36.12:551,36,0	1/1:1,45:46:99:1700,111,0	1/1:0,9:9:27.09:414,27,0	0/0:8,0:8:21.07:0,21,406	0/0:39,0:39:99:0,117,2254	1/1:0,11:11:27.09:414,27,0	1/1:0,12:12:36.12:551,36,0	1/1:2,19:21:54.18:827,54,0	1/1:0,8:8:24.08:368,24,0
chr10	40352998	.	AATGT	A	4429.03	PASS	AB=1.000;AC=47;AF=0.904;AN=52;BaseQRankSum=6.582;DP=869;FS=4.238;HRun=0;HaplotypeScore=195.4125;InbreedingCoeff=0.4865;MQ=67.52;MQ0=7;MQRankSum=-3.773;QD=5.94;ReadPosRankSum=-1.543;VQSLOD=3.7573;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:63.05:0,63,1015	1/1:9,0:9:11.78:77,12,0	./.	./.	1/1:22,0:22:8.87:63,9,0	1/1:28,0:28:23.81:221,24,0	1/1:28,0:28:29.85:240,30,0	0/1:36,0:34:11.02:38,0,11	1/1:40,0:40:20.66:147,21,0	1/1:42,0:41:59.64:497,60,0	1/1:15,0:15:11.78:79,12,0	1/1:50,0:50:41.27:263,41,0	1/1:25,22:47:26.88:418,27,0	1/1:22,21:43:21.07:325,21,0	1/1:35,0:35:14.69:90,15,0	1/1:38,0:38:26.67:201,27,0	1/1:24,0:24:6.01:56,6,0	1/1:26,0:26:3:28,3,0	1/1:25,0:25:16.55:145,17,0	1/1:30,0:30:20.22:229,20,0	1/1:39,0:39:17.97:148,18,0	1/1:22,0:22:23.45:138,23,0	1/1:27,0:27:8.25:44,8,0	0/0:33,0:32:0:0,0,0	1/1:30,0:30:20.59:126,21,0	1/1:32,0:32:51.90:501,52,0	1/1:35,0:35:28.58:208,29,0	1/1:23,0:23:14.98:146,15,0
chr10	40353030	.	TATGTATGTATGTATGC	T	7570.57	PASS	AB=0.938;AC=23;AF=0.411;AN=56;BaseQRankSum=6.534;DP=829;FS=6.679;HRun=0;HaplotypeScore=306.8920;InbreedingCoeff=-0.0939;MQ=56.61;MQ0=10;MQRankSum=-1.874;QD=13.08;ReadPosRankSum=1.192;VQSLOD=2.5366;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,99,4466	0/1:8,0:8:7.17:191,0,7	0/0:6,0:4:8.18:0,8,50	0/0:7,0:3:3.01:0,3,46	1/1:24,0:24:7.98:267,8,0	0/0:22,0:21:36.09:0,36,598	0/1:33,0:33:99:260,0,664	0/1:33,0:27:99:163,0,527	0/0:37,0:37:24.38:0,24,454	1/1:44,0:42:77.58:1943,78,0	0/1:25,0:25:45.54:267,0,46	1/1:1,47:48:42.14:1406,42,0	0/0:40,0:40:75.13:0,75,2224	0/0:42,0:42:84.11:0,84,2061	0/1:44,0:44:71.90:288,0,72	0/1:40,0:40:44.07:669,0,44	0/1:17,0:17:14.97:236,0,15	1/1:25,0:25:3.01:121,3,0	0/1:20,0:17:99:123,0,152	0/0:34,0:34:47.42:0,47,511	0/1:40,0:39:99:153,0,188	0/1:26,0:26:19.90:485,0,20	0/1:5,24:29:6.70:371,0,7	0/1:3,26:29:0:0,0,0	0/0:27,0:27:26.51:0,27,242	0/1:36,0:36:99:438,0,394	0/1:37,0:37:28:28,0,353	0/1:21,0:21:99:161,0,152
chr10	40353034	.	TATGTATGTATGCATGC	T	10590.21	PASS	AB=0.934;AC=30;AF=0.556;AN=54;BaseQRankSum=5.157;DP=825;FS=20.628;HRun=0;HaplotypeScore=306.6652;InbreedingCoeff=0.3266;MQ=56.80;MQ0=11;MQRankSum=-1.665;QD=19.25;ReadPosRankSum=1.042;VQSLOD=2.1842;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,108,4524	1/1:8,0:8:18:334,18,0	1/1:5,0:3:2.04:6,2,0	./.	1/1:0,23:23:8.35:320,8,0	0/0:22,0:21:30.07:0,30,542	0/0:33,0:33:34.16:0,34,546	0/1:36,0:30:99:680,0,192	0/0:35,0:36:2.57:0,3,386	1/1:4,43:44:99:2849,114,0	1/1:3,23:26:12.51:357,13,0	1/1:47,0:48:42.14:1170,42,0	0/0:41,0:41:81.24:0,81,2510	0/0:42,0:42:69.21:0,69,2146	1/1:3,39:42:15.03:404,15,0	0/1:2,35:37:30.33:815,0,30	1/1:2,15:17:6.02:280,6,0	1/1:0,25:25:3.01:140,3,0	0/1:20,0:17:21.84:320,0,22	0/0:34,0:34:22.67:0,23,217	0/1:40,0:39:16.29:526,0,16	1/1:2,26:28:24.08:654,24,0	1/1:26,0:26:11.41:298,11,0	0/1:26,0:25:0:0,0,0	0/0:25,0:25:5.94:0,6,66	0/1:38,0:38:77.78:1075,0,78	0/1:37,0:37:99:123,0,127	0/1:20,1:21:60.57:238,0,61
chr10	40353038	.	TATGTATGCATGC	T	12240.24	PASS	AB=1.000;AC=43;AF=0.860;AN=50;BaseQRankSum=6.566;DP=811;FS=4.989;HRun=0;HaplotypeScore=257.6334;InbreedingCoeff=0.6750;MQ=56.95;MQ0=11;MQRankSum=-3.142;QD=18.52;ReadPosRankSum=-1.857;VQSLOD=3.3948;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,111,3521	1/1:9,1:10:26.85:349,27,0	./.	./.	1/1:23,0:23:8.86:182,9,0	1/1:2,0:22:7.52:24,8,0	0/1:34,0:34:46.96:159,0,47	1/1:40,0:34:28.93:1033,29,0	1/1:1,0:38:4.57:59,5,0	1/1:46,0:43:99:1992,111,0	1/1:24,0:24:14.96:234,15,0	1/1:48,0:48:42.05:520,42,0	0/0:41,0:41:75.09:0,75,1672	0/0:36,0:36:63.22:0,63,1415	1/1:39,0:39:15.49:173,15,0	1/1:35,0:36:25.63:473,26,0	1/1:16,0:16:6.02:186,6,0	1/1:25,0:25:3.01:93,3,0	1/1:7,14:18:41.85:775,42,0	1/1:1,33:34:24.11:822,24,0	1/1:41,0:40:59.96:982,60,0	1/1:26,0:26:23.99:293,24,0	1/1:25,0:25:11.25:114,11,0	./.	1/1:0,23:23:21.07:447,21,0	1/1:4,33:37:99:2022,99,0	1/1:3,32:35:32.32:821,32,0	1/1:1,17:18:15.05:485,15,0
chr10	40354584	.	A	AAGAT	6045.88	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-8.513;DP=836;FS=0.912;HRun=0;HaplotypeScore=138.5726;InbreedingCoeff=0.9997;MQ=91.58;MQ0=0;MQRankSum=-5.835;QD=61.07;ReadPosRankSum=1.586;VQSLOD=6.5338;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,111,2036	0/0:15,0:15:42.13:0,42,754	0/0:45,0:45:99:0,114,2018	0/0:22,0:22:50.74:0,51,993	0/0:34,0:34:84.29:0,84,1553	0/0:22,0:22:30.10:0,30,560	0/0:29,0:29:78.27:0,78,1436	0/0:40,0:40:99:0,99,1799	0/0:26,0:26:72.23:0,72,1313	0/0:27,0:27:81.28:0,81,1494	0/0:18,0:18:51.17:0,51,945	1/1:4,38:46:99:2939,111,0	0/0:31,0:31:81.28:0,81,1512	0/0:35,0:35:99:0,102,1889	0/0:54,0:54:99:0,144,2560	0/0:28,0:28:81.28:0,81,1486	0/0:22,0:22:66.20:0,66,1191	0/0:19,0:19:48.16:0,48,886	0/0:22,0:22:60.21:0,60,1120	0/0:18,0:18:54.18:0,54,979	0/0:38,0:38:99:0,108,1919	0/0:27,0:27:72.25:0,72,1316	1/1:3,21:24:57.19:1428,57,0	1/1:4,25:28:63.19:1679,63,0	0/0:24,0:24:42.11:0,42,693	0/0:41,0:41:99:0,117,2149	0/0:35,0:34:99:0,99,1810	0/0:13,0:12:36.12:0,36,644
chr10	40355820	.	AAAAAG	A	718.30	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=-2.284;DP=573;FS=5.747;HRun=0;HaplotypeScore=130.3438;InbreedingCoeff=0.0210;MQ=50.83;MQ0=9;MQRankSum=-1.953;QD=2.70;ReadPosRankSum=-3.381;VQSLOD=1.3036;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,103,2114	0/0:10,0:10:4.64:0,5,122	0/0:27,0:9:10.90:0,11,123	0/0:32,0:10:3.91:0,4,341	0/1:26,0:25:55.81:56,0,262	1/1:1,15:16:12.04:218,12,0	1/1:4,14:17:12.03:186,12,0	0/1:37,0:32:2.11:2,0,212	1/1:3,11:14:12.93:238,13,0	0/1:24,0:24:45.64:46,0,166	0/0:15,0:15:18.93:0,19,234	0/0:27,0:27:65.67:0,66,1223	0/0:23,0:23:43.56:0,44,779	0/0:16,0:16:24.31:0,24,500	0/1:12,0:10:6.94:7,0,187	0/1:16,0:14:27.28:27,0,101	0/0:15,0:12:0.82:0,1,167	0/1:17,0:15:14.81:15,0,118	0/1:20,0:19:11.14:11,0,348	0/0:13,0:11:7.57:0,8,82	0/1:10,0:9:16.03:31,0,16	0/1:7,0:7:2.26:2,0,84	0/0:24,0:24:65:0,65,1222	0/0:16,0:16:48.13:0,48,1079	0/0:33,0:29:2.61:0,3,353	0/1:27,0:27:27.92:28,0,507	0/1:22,0:20:12.54:13,0,395	0/0:17,0:16:8.47:0,8,121
chr10	40355824	.	AG	A	4019.97	PASS	AB=0.921;AC=41;AF=0.732;AN=56;BaseQRankSum=8.673;DP=571;FS=3.099;HRun=1;HaplotypeScore=88.7560;InbreedingCoeff=0.8296;MQ=51.65;MQ0=11;MQRankSum=-10.433;QD=10.10;ReadPosRankSum=-3.552;VQSLOD=0.2980;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:15.49:0,15,805	1/1:10,0:10:15.25:74,15,0	0/1:32,3:10:31.48:31,0,58	0/0:31,1:11:1.24:0,1,95	1/1:28,0:27:56.51:353,57,0	1/1:15,0:15:11.02:77,11,0	1/1:17,0:16:11.96:93,12,0	1/1:34,0:30:61.13:359,61,0	1/1:14,0:14:14.91:111,15,0	1/1:24,0:24:62.61:407,63,0	1/1:13,2:15:35.38:210,35,0	0/0:25,0:25:51.74:0,52,631	0/0:22,0:22:43.60:0,44,255	0/0:16,0:16:26.70:0,27,124	1/1:10,0:8:7.25:33,7,0	1/1:16,0:14:29.74:206,30,0	1/1:14,0:11:20.52:114,21,0	1/1:18,0:16:28.99:175,29,0	1/1:20,0:19:43.40:281,43,0	1/1:13,0:11:19.87:135,20,0	1/1:9,0:8:20.69:145,21,0	1/1:7,0:7:16.90:100,17,0	0/0:24,0:24:42.49:0,42,537	0/0:16,0:16:47.35:0,47,457	1/1:32,0:28:53.54:305,54,0	1/1:27,0:27:66.02:413,66,0	1/1:20,1:20:39.87:258,40,0	1/1:18,0:17:21.58:141,22,0
chr10	40356713	.	TCCCATGCCTGGGATCTTTGGGGGGCTTA	T	3955.74	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=6.193;DP=608;FS=11.958;HRun=0;HaplotypeScore=414.3714;InbreedingCoeff=0.9751;MQ=82.96;MQ0=0;MQRankSum=-6.738;QD=85.99;ReadPosRankSum=2.452;VQSLOD=1.7176;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,114,12948	0/0:12,0:12:36.12:0,36,4227	0/0:18,0:18:54.18:0,54,3019	0/0:21,0:21:57.17:0,57,2845	0/0:16,0:16:48.16:0,48,5576	1/1:5,8:13:18.06:1342,18,0	1/1:12,0:12:9.01:153,9,0	0/0:33,0:33:93.32:0,93,7701	1/1:5,16:21:33.11:2460,33,0	0/0:18,0:18:45.15:0,45,4901	0/0:11,0:11:33.10:0,33,3648	0/0:34,0:34:99:0,102,10692	0/0:22,0:22:63.22:0,63,7318	0/0:27,0:27:75.26:0,75,8305	0/0:32,0:32:87.30:0,87,10130	0/0:32,0:32:93.32:0,93,10601	0/0:34,0:34:99:0,102,11953	0/0:23,0:23:63.22:0,63,7252	0/0:21,0:21:60.21:0,60,4891	0/0:15,0:15:45.15:0,45,5454	0/0:38,0:38:99:0,111,11585	0/0:15,0:15:42.14:0,42,5299	0/0:11,0:11:33.11:0,33,4259	0/0:19,0:19:52.06:0,52,4801	0/0:18,0:18:54.16:0,54,6074	0/0:24,0:24:60.21:0,60,7063	0/0:18,0:18:54.19:0,54,6371	0/0:9,0:9:27.09:0,27,3011
chr10	40357932	.	TG	T	16012.23	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=14.390;DP=746;FS=3.951;HRun=2;HaplotypeScore=73.5740;InbreedingCoeff=0.9971;MQ=85.07;MQ0=0;MQRankSum=-6.319;QD=36.39;ReadPosRankSum=4.082;VQSLOD=5.5620;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:61,0:61:99:0,181,2674	1/1:1,9:10:21.07:273,21,0	0/0:27,0:27:81.22:0,81,1134	0/0:18,0:18:50.90:0,51,709	1/1:1,25:26:75.24:974,75,0	0/0:25,0:26:75.12:0,75,1092	0/0:27,0:27:81.26:0,81,1195	1/1:3,26:29:78.22:983,78,0	0/0:21,0:21:60.20:0,60,898	1/1:2,30:32:90.29:1169,90,0	1/1:1,24:25:69.22:890,69,0	0/0:28,0:28:84.27:0,84,1239	0/0:33,0:33:99:0,99,1470	0/0:28,0:28:84.28:0,84,1253	1/1:1,38:39:99:1403,108,0	1/1:0,43:43:99:1597,123,0	1/1:0,28:28:81.26:1052,81,0	1/1:0,17:17:51.17:662,51,0	1/1:0,23:23:69.22:895,69,0	1/1:0,22:22:63.20:818,63,0	1/1:0,38:38:99:1402,108,0	1/1:1,24:25:72.23:935,72,0	0/0:20,0:20:60.20:0,60,899	0/0:17,0:17:51.17:0,51,764	1/1:0,18:18:48.16:623,48,0	1/1:0,33:33:99:1284,99,0	1/1:1,26:27:66.21:857,66,0	1/1:0,5:5:15.05:195,15,0
chr10	40358485	.	CCAA	C	522.17	PASS	AB=0.985;AC=20;AF=0.357;AN=56;BaseQRankSum=0.449;DP=394;FS=8.385;HRun=0;HaplotypeScore=60.4164;InbreedingCoeff=-0.1242;MQ=69.91;MQ0=3;MQRankSum=2.826;QD=2.17;ReadPosRankSum=-1.222;VQSLOD=0.2919;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:2,22:23:8.96:94,9,0	1/1:2,0:2:0.43:8,0,0	0/0:38,0:21:22.23:0,22,263	0/1:26,0:14:17.12:17,0,103	0/1:13,1:14:15.01:72,0,15	0/0:20,0:19:34.49:0,34,598	0/0:15,0:15:42.07:0,42,582	0/1:18,0:19:50.31:113,0,50	0/0:9,0:9:24.90:0,25,326	0/1:7,0:7:10.43:49,0,10	0/1:13,0:14:2.91:20,0,3	0/1:17,0:16:5.44:5,0,228	0/0:6,0:6:14.06:0,14,153	0/0:9,0:9:27.01:0,27,280	0/0:24,0:24:20.46:0,20,155	0/1:21,0:21:71.71:72,0,302	0/1:14,0:14:10.97:11,0,193	0/0:12,0:12:23.07:0,23,182	0/1:10,0:10:22.12:74,0,22	0/1:17,0:17:11.47:11,0,96	1/1:9,0:9:2.65:22,3,0	0/0:4,0:4:8.36:0,8,56	0/1:7,0:7:10.61:11,0,68	0/0:14,0:14:24.36:0,24,215	0/1:12,1:13:30.77:31,0,130	0/1:19,0:19:62.44:62,0,76	0/1:8,0:7:8.74:9,0,53	0/0:2,0:2:1.25:0,1,3
chr10	40359090	.	G	GAAA	9570.21	PASS	AB=0.571;AC=51;AF=0.911;AN=56;BaseQRankSum=-3.256;DP=592;FS=8.483;HRun=13;HaplotypeScore=107.6431;InbreedingCoeff=0.6643;MQ=70.24;MQ0=1;MQRankSum=-2.540;QD=17.40;ReadPosRankSum=-0.848;VQSLOD=3.1023;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,0:51:69.52:517,70,0	1/1:2,3:7:15.03:208,15,0	0/0:20,0:16:16.97:0,17,173	0/0:21,0:19:9.57:0,10,88	1/1:15,11:28:42.44:527,42,0	1/1:18,0:21:27.02:334,27,0	1/1:7,0:7:15.03:183,15,0	1/1:16,7:26:38.82:453,39,0	1/1:13,0:14:18.06:238,18,0	1/1:1,11:18:48.09:678,48,0	1/1:5,9:19:33.30:330,33,0	0/1:6,1:24:28.67:223,0,29	1/1:2,0:14:16.19:117,16,0	1/1:2,0:19:26.92:219,27,0	1/1:6,4:19:29.85:381,30,0	1/1:9,5:15:17.98:229,18,0	1/1:5,21:27:26.69:439,27,0	1/1:3,16:26:41.99:567,42,0	1/1:13,8:25:42.07:603,42,0	1/1:9,10:21:36.04:524,36,0	1/1:6,8:19:25.98:250,26,0	1/1:10,6:21:26.94:327,27,0	1/1:4,0:14:12.25:78,12,0	1/1:0,0:11:3.28:119,3,0	1/1:3,16:20:17.97:240,18,0	1/1:9,7:22:42.08:476,42,0	1/1:3,19:29:51.15:806,51,0	1/1:8,20:33:39.01:502,39,0
chr10	40359136	.	C	CG	1156.34	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-1.806;DP=481;FS=4.576;HRun=3;HaplotypeScore=66.7849;InbreedingCoeff=0.9870;MQ=86.28;MQ0=0;MQRankSum=-2.782;QD=30.43;ReadPosRankSum=0.735;VQSLOD=3.2937;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:81.21:0,81,944	0/0:5,0:5:15.05:0,15,180	0/0:18,0:18:44.83:0,45,477	0/0:14,0:14:30.83:0,31,281	0/0:20,0:20:57.11:0,57,655	1/1:1,17:18:39.13:544,39,0	1/1:1,12:13:36.12:503,36,0	0/0:35,0:35:93.23:0,93,1089	1/1:1,6:7:18.06:251,18,0	0/0:18,0:18:48.12:0,48,555	0/0:17,0:17:48.06:0,48,533	0/0:20,0:20:48.07:0,48,544	0/0:13,0:13:30.06:0,30,336	0/0:20,0:20:48.02:0,48,543	0/0:19,0:19:48.08:0,48,549	0/0:12,0:12:27.07:0,27,312	0/0:24,0:24:63.13:0,63,742	0/0:20,0:20:48.15:0,48,574	0/0:14,0:14:39.07:0,39,440	0/0:20,0:20:60.18:0,60,718	0/0:9,0:9:18.06:0,18,216	0/0:12,0:12:36.05:0,36,396	0/0:13,0:13:27:0,27,304	0/0:13,0:13:36.08:0,36,409	0/0:24,0:24:48.14:0,48,566	0/0:14,0:14:42.13:0,42,502	0/0:19,0:18:45.10:0,45,522	0/0:12,0:12:27.05:0,27,299
chr10	40359604	.	TGG	T	3567.93	PASS	AB=0.743;AC=35;AF=0.625;AN=56;BaseQRankSum=-0.804;DP=398;FS=24.379;HRun=13;HaplotypeScore=63.4714;InbreedingCoeff=0.5091;MQ=77.08;MQ0=2;MQRankSum=-0.885;QD=12.79;ReadPosRankSum=6.068;VQSLOD=0.3064;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:8,2:13:6.20:47,0,6	1/1:0,5:6:17.75:149,18,0	0/0:31,0:22:29.86:0,30,458	0/0:20,0:15:1.74:0,2,151	1/1:2,11:13:24.01:232,24,0	0/0:11,0:11:8.61:0,9,78	0/0:16,0:18:25.98:0,26,239	0/1:10,2:14:20.60:21,0,25	0/0:6,0:6:15.02:0,15,171	1/1:7,5:12:11.99:116,12,0	1/1:6,5:12:20.76:186,21,0	1/1:5,12:19:26.49:227,26,0	1/1:4,0:18:38.41:166,38,0	1/1:3,0:7:10.98:48,11,0	1/1:10,11:21:32.98:320,33,0	1/1:6,17:26:53.28:472,53,0	1/1:3,13:17:29.77:274,30,0	1/1:6,16:25:56.28:501,56,0	0/1:8,1:12:19.55:43,0,20	0/0:6,0:12:5.96:0,6,33	0/0:6,0:10:2.50:0,2,9	1/1:6,7:15:23.50:198,23,0	1/1:5,10:18:32.22:268,32,0	1/1:8,6:14:24.02:233,24,0	1/1:5,1:6:2.97:29,3,0	0/1:4,1:6:9.14:21,0,9	0/0:3,0:9:12.99:0,13,78	0/1:3,1:5:18.10:18,0,41
chr10	40359885	.	AT	A	5980.22	PASS	AB=0.948;AC=36;AF=0.643;AN=56;BaseQRankSum=5.537;DP=509;FS=4.742;HRun=8;HaplotypeScore=76.3728;InbreedingCoeff=0.8253;MQ=70.34;MQ0=3;MQRankSum=0.151;QD=17.14;ReadPosRankSum=-0.403;VQSLOD=4.7730;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:28,1:29:79.19:121,0,79	1/1:1,6:7:15.02:143,15,0	0/0:21,0:12:6.21:0,6,84	0/0:17,0:10:14.05:0,14,94	1/1:3,16:19:49.20:450,49,0	0/0:1,0:17:40.25:0,40,205	0/0:8,0:18:23.24:0,23,145	1/1:7,38:45:99:894,103,0	0/1:2,1:13:11.26:11,0,56	1/1:2,13:15:36.30:312,36,0	1/1:2,12:14:30.05:287,30,0	0/0:20,0:20:54:0,54,576	0/0:19,0:19:47.98:0,48,505	0/0:17,0:17:48.03:0,48,521	1/1:3,18:21:40.69:399,41,0	1/1:2,16:19:32.54:291,33,0	1/1:1,16:17:44.52:454,45,0	1/1:3,21:24:28.02:285,28,0	1/1:4,11:17:43.61:366,44,0	1/1:1,14:16:32.08:293,32,0	1/1:3,10:13:24.04:230,24,0	1/1:9,7:16:28.13:218,28,0	0/0:15,0:15:42.12:0,42,495	0/0:15,0:15:39.06:0,39,442	1/1:2,9:11:23.93:217,24,0	1/1:1,22:24:61.48:471,61,0	1/1:1,19:20:40.01:397,40,0	1/1:2,6:8:15.02:144,15,0
chr10	40360059	.	GA	G	8825.18	PASS	AC=52;AF=1.000;AN=52;DP=268;FS=0.000;HRun=2;HaplotypeScore=130.5235;InbreedingCoeff=-0.0127;MQ=28.77;MQ0=0;QD=32.93;VQSLOD=4.3276;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,17:17:39.12:480,39,0	1/1:0,7:7:21.07:272,21,0	./.	./.	1/1:0,15:15:42.13:514,42,0	1/1:0,14:14:39.13:501,39,0	1/1:0,7:7:15.05:191,15,0	1/1:0,15:15:42.14:544,42,0	1/1:0,7:6:18.06:233,18,0	1/1:1,7:8:21.07:272,21,0	1/1:0,19:19:45.26:554,45,0	1/1:0,11:11:27.09:350,27,0	1/1:2,6:8:15.05:194,15,0	1/1:0,8:8:18.06:229,18,0	1/1:0,9:9:24.08:311,24,0	1/1:0,7:7:21.07:272,21,0	1/1:0,7:7:18.06:230,18,0	1/1:0,6:6:18.06:229,18,0	1/1:0,12:12:36.12:467,36,0	1/1:2,8:10:21.07:264,21,0	1/1:1,4:5:9.03:108,9,0	1/1:0,15:15:39.13:500,39,0	1/1:0,9:9:27.08:330,27,0	1/1:0,4:4:3.01:39,3,0	1/1:0,10:10:27.09:346,27,0	1/1:0,19:19:57.19:739,57,0	1/1:0,14:13:39.13:500,39,0	1/1:0,4:4:12.04:155,12,0
chr10	40360148	.	C	CG	201.78	PASS	AB=0.790;AC=9;AF=0.167;AN=54;BaseQRankSum=5.849;DP=232;FS=2.491;HRun=1;HaplotypeScore=43.2452;InbreedingCoeff=-0.1411;MQ=85.26;MQ0=0;MQRankSum=-4.795;QD=2.84;ReadPosRankSum=1.000;VQSLOD=-0.4059;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:15,1:15:3.97:4,0,502	0/1:1,1:2:15.90:36,0,16	0/0:8,0:7:17.48:0,17,256	0/0:13,0:9:33.03:0,33,433	0/1:2,2:4:0:0,0,0	0/0:9,0:9:21.07:0,21,293	0/0:15,0:15:42.05:0,42,542	0/0:9,0:9:27.05:0,27,355	0/0:3,0:3:9.03:0,9,125	0/1:6,2:8:62.08:62,0,186	0/0:3,1:4:10.79:0,11,92	0/0:8,0:8:21.07:0,21,293	0/0:3,0:3:6.02:0,6,84	0/0:6,0:6:15.05:0,15,209	./.	0/0:2,0:2:6.02:0,6,83	0/0:17,0:17:42.11:0,42,562	0/1:6,1:7:22.22:22,0,230	0/0:18,1:19:13.86:0,14,688	0/0:2,0:2:6.02:0,6,79	0/0:16,0:16:42.14:0,42,580	0/1:1,2:3:28.78:29,0,35	0/0:7,4:11:7.55:0,8,110	0/0:14,0:14:27.05:0,27,347	0/1:8,4:12:99:143,0,256	0/1:8,1:9:16.75:17,0,306	0/1:9,1:10:15.96:16,0,307	0/0:2,0:2:3.01:0,3,42
chr10	40360472	.	CACACACACGCGCGCGCGCGT	C	5241.83	PASS	AB=0.993;AC=25;AF=0.463;AN=54;BaseQRankSum=1.258;DP=347;FS=12.637;HRun=0;HaplotypeScore=190.1918;InbreedingCoeff=-0.1475;MQ=32.17;MQ0=20;MQRankSum=-1.892;QD=21.05;ReadPosRankSum=2.736;VQSLOD=3.0600;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:27:13.46:0,13,453	1/1:4,0:4:7.66:243,8,0	0/0:5,0:1:3.01:0,3,72	./.	1/1:21,0:19:15.06:211,15,0	0/0:11,0:11:4:0,4,50	0/0:12,0:12:0.47:0,0,1	0/1:28,0:26:99:1188,0,240	0/1:13,0:13:99:129,0,112	0/1:9,1:8:99:580,0,297	1/1:1,7:8:0.89:2,1,0	0/0:16,0:16:36.12:0,36,1887	0/0:3,0:2:3.48:0,3,119	0/0:12,0:10:12.03:0,12,311	1/1:10,0:10:8.10:164,8,0	0/1:6,0:6:99:148,0,168	1/1:12,0:10:6.02:112,6,0	0/1:11,0:11:99:142,0,241	0/1:20,0:15:99:262,0,223	0/1:7,0:7:2.93:98,0,3	1/1:17,0:16:3.90:68,4,0	0/1:15,0:14:75.28:219,0,75	0/1:12,0:12:28.95:29,0,618	0/0:7,0:7:3.48:0,3,117	0/1:10,0:9:27.70:48,0,28	0/1:15,0:14:99:651,0,108	0/1:16,0:15:99:670,0,126	0/1:14,0:13:58.52:279,0,59
chr10	40360475	.	ACACACGCGCGCGCG	A	6995.39	PASS	AB=0.916;AC=28;AF=0.538;AN=52;BaseQRankSum=-3.167;DP=340;FS=20.158;HRun=0;HaplotypeScore=169.4214;InbreedingCoeff=0.0585;MQ=31.66;MQ0=20;MQRankSum=-1.534;QD=28.55;ReadPosRankSum=0.698;VQSLOD=2.8546;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:26:8.55:0,9,203	1/1:5,0:5:11.03:322,11,0	./.	./.	1/1:17,4:19:15.48:282,15,0	0/0:11,0:11:4.40:0,4,48	0/0:12,0:12:0.47:0,0,1	1/1:25,0:23:53.78:1473,54,0	0/1:13,0:13:60.95:105,0,61	0/1:10,0:8:99:375,0,227	1/1:8,0:8:0.47:1,0,0	0/0:16,0:16:36.12:0,36,1297	0/0:3,0:2:3.48:0,3,94	0/0:12,0:10:11.93:0,12,239	1/1:7,3:10:8.65:274,9,0	0/1:5,1:6:52:184,0,52	1/1:11,1:10:8.03:112,8,0	0/1:9,2:11:65.84:237,0,66	0/1:18,0:14:89.86:380,0,90	0/1:7,0:7:2.93:169,0,3	1/1:16,0:16:3.90:68,4,0	0/1:13,2:14:23.69:375,0,24	0/1:12,0:12:28.95:29,0,406	0/0:7,0:7:3.48:0,3,63	1/1:10,2:11:12.25:207,12,0	0/1:10,3:13:36.72:987,0,37	0/1:13,3:16:55.92:808,0,56	1/1:10,2:11:17.99:607,18,0
chr10	40360476	.	CACACGCGCGCGCGCGT	C	7733.02	PASS	AB=0.941;AC=28;AF=0.538;AN=52;BaseQRankSum=-4.034;DP=334;FS=19.701;HRun=0;HaplotypeScore=171.2532;InbreedingCoeff=0.0536;MQ=31.47;MQ0=20;MQRankSum=-2.935;QD=32.49;ReadPosRankSum=0.385;VQSLOD=2.6963;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:25:8.04:0,8,202	1/1:5,0:5:10.83:322,11,0	./.	./.	1/1:19,2:19:15.17:282,15,0	0/0:11,0:11:4.13:0,4,51	0/0:12,0:12:0.47:0,0,1	1/1:22,0:20:53.79:1552,54,0	0/1:13,0:13:99:102,0,113	0/1:10,0:8:99:434,0,298	1/1:8,0:8:0.89:2,1,0	0/0:17,0:17:36.59:0,37,1418	0/0:4,0:3:2.17:0,2,116	0/0:12,0:10:11.93:0,12,289	1/1:8,1:9:8.67:307,9,0	0/1:4,0:5:99:199,0,99	1/1:10,0:8:9.03:207,9,0	0/1:11,0:11:99:261,0,206	0/1:19,0:14:99:380,0,173	0/1:7,0:7:2.93:170,0,3	1/1:17,0:16:4.26:68,4,0	0/1:13,2:14:23.69:428,0,24	0/1:12,0:12:28.95:29,0,406	0/0:7,0:7:3.48:0,3,63	1/1:10,2:11:12.59:208,13,0	0/1:13,1:13:99:1113,0,107	0/1:11,5:15:99:996,0,126	1/1:10,2:11:17.12:674,17,0
chr10	40360479	.	ACGCGCGCGCG	A	5662.32	PASS	AB=0.934;AC=29;AF=0.558;AN=52;BaseQRankSum=-4.481;DP=329;FS=23.355;HRun=0;HaplotypeScore=161.5536;InbreedingCoeff=-0.1038;MQ=30.95;MQ0=17;MQRankSum=-0.125;QD=22.47;ReadPosRankSum=-0.443;VQSLOD=2.7792;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:25:3.87:0,4,30	1/1:4,1:5:11.33:277,11,0	./.	./.	1/1:20,1:19:15.52:235,16,0	0/0:11,0:11:4.57:0,5,59	0/0:9,1:12:0:0,0,0	1/1:20,0:19:48.11:1409,48,0	0/1:12,1:13:64.12:64,0,73	0/1:10,0:8:99:291,0,183	0/1:8,0:8:0:0,0,0	0/0:17,0:17:34:0,34,809	0/1:5,0:4:13.10:13,0,87	0/1:14,0:12:8.79:9,0,202	1/1:8,0:9:9.03:186,9,0	0/1:4,1:5:52:143,0,52	1/1:8,0:6:8.03:112,8,0	0/1:11,0:11:68.85:129,0,69	0/1:17,2:15:85.05:312,0,85	0/1:5,2:7:3.08:123,0,3	1/1:12,3:15:3.48:67,3,0	0/1:11,3:13:26.66:254,0,27	0/1:12,0:12:81.56:82,0,182	0/0:6,0:6:0.47:0,0,1	1/1:12,0:11:9.09:173,9,0	0/1:12,2:13:36.72:783,0,37	0/1:16,0:15:55.91:606,0,56	1/1:11,1:11:18.06:394,18,0
chr10	40360480	.	CGCGCGCGCGCGT	C	6421.66	PASS	AB=0.944;AC=31;AF=0.596;AN=52;BaseQRankSum=-4.665;DP=324;FS=22.806;HRun=0;HaplotypeScore=163.5705;InbreedingCoeff=-0.1112;MQ=30.88;MQ0=16;MQRankSum=-1.860;QD=24.32;ReadPosRankSum=-0.302;VQSLOD=2.7434;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:23:3.87:0,4,30	1/1:4,1:5:11.42:277,11,0	./.	./.	1/1:18,2:19:15.52:235,16,0	0/0:11,0:11:4.56:0,5,86	0/1:12,0:12:0:0,0,0	1/1:2,18:19:47.24:1486,47,0	0/1:13,0:13:62.76:63,0,146	0/1:9,1:8:99:351,0,254	1/1:8,0:8:0.47:1,0,0	0/0:15,0:15:33.58:0,34,930	0/1:5,0:4:12.95:13,0,111	0/1:14,0:12:36.08:36,0,252	1/1:9,0:9:9.03:214,9,0	0/1:5,0:5:99:157,0,99	1/1:7,1:6:9.03:203,9,0	0/1:11,0:11:99:154,0,209	0/1:18,0:14:99:312,0,168	0/1:6,1:7:2.93:122,0,3	1/1:14,2:15:3.89:68,4,0	0/1:11,3:13:26.66:340,0,27	0/1:12,0:12:82.87:83,0,182	0/0:6,0:6:0.47:0,0,1	1/1:11,1:11:9.25:174,9,0	0/1:11,3:13:99:903,0,107	0/1:14,2:15:99:782,0,126	1/1:10,1:11:17.19:449,17,0
chr10	40360502	.	T	TAAAC	1602.40	PASS	AB=0.982;AC=31;AF=0.554;AN=56;BaseQRankSum=3.029;DP=419;FS=79.980;HRun=0;HaplotypeScore=176.7637;InbreedingCoeff=-0.3597;MQ=38.65;MQ0=10;MQRankSum=-1.895;QD=4.16;ReadPosRankSum=0.649;VQSLOD=-0.4995;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:26,1:27:4.17:169,4,0	0/0:9,0:9:1.09:0,1,68	0/1:17,0:7:8.75:9,0,264	0/0:14,0:8:23.08:0,23,353	0/1:22,0:21:4.99:14,0,5	0/1:17,0:17:40.60:204,0,41	0/1:19,0:19:50.57:68,0,51	0/1:24,2:25:99:114,0,562	0/1:17,0:17:99:105,0,193	0/1:18,0:16:99:123,0,422	0/1:9,1:11:1.99:59,0,2	0/1:18,0:17:58.81:59,0,406	1/1:4,0:4:2.81:30,3,0	0/1:12,0:11:26.47:26,0,32	0/1:12,0:12:31.96:37,0,32	1/1:7,0:7:7.82:62,8,0	0/1:16,0:14:34.20:34,0,93	0/1:16,1:17:99:253,0,116	0/1:16,0:12:99:143,0,202	1/1:10,0:10:9.95:50,10,0	1/1:13,0:13:2.69:8,3,0	0/1:18,0:17:3.53:4,0,88	0/1:12,0:12:1.34:1,0,57	1/1:7,0:7:2.04:6,2,0	0/1:13,0:12:3.48:3,0,4	0/1:17,0:16:95.66:96,0,306	0/1:17,0:17:75.92:76,0,228	0/0:11,0:10:18.06:0,18,323
chr10	40360503	.	G	GTGTAAACGAT	16162.02	PASS	AB=0.758;AC=40;AF=0.714;AN=56;BaseQRankSum=-4.034;DP=502;FS=46.725;HRun=0;HaplotypeScore=206.4463;InbreedingCoeff=0.0566;MQ=40.36;MQ0=8;MQRankSum=-3.879;QD=35.44;ReadPosRankSum=-1.695;VQSLOD=2.5979;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:33:23.70:783,24,0	0/1:3,6:9:6.19:196,0,6	0/0:18,0:8:9.80:0,10,370	0/0:15,0:9:24.07:0,24,490	1/1:20,5:25:19.83:520,20,0	0/1:13,0:19:54.50:850,0,54	1/1:15,0:19:14.49:319,14,0	0/1:33,0:34:34.79:1825,0,35	0/1:15,0:19:99:616,0,242	0/1:15,7:20:99:1160,0,101	1/1:11,0:12:10.19:242,10,0	0/1:13,0:21:99:610,0,326	1/1:3,0:7:15.05:494,15,0	1/1:9,0:13:20.55:638,21,0	1/1:11,0:16:6.39:454,6,0	1/1:5,3:9:11.91:440,12,0	1/1:14,6:20:24.57:667,25,0	0/1:8,10:19:55.24:1340,0,55	0/1:12,5:16:86.57:1131,0,87	1/1:12,0:16:18.04:413,18,0	1/1:12,3:15:8.93:206,9,0	1/1:14,4:18:18.46:274,18,0	0/1:11,0:14:22.13:468,0,22	0/1:7,0:10:48.03:82,0,48	1/1:10,4:15:9.46:298,9,0	1/1:15,5:20:1.06:1065,1,0	1/1:16,5:22:36.61:1071,37,0	0/0:9,2:11:11.57:0,12,168
chr10	40361675	.	AGAT	A	20371.85	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=16.478;DP=800;FS=5.950;HRun=0;HaplotypeScore=124.9857;InbreedingCoeff=0.9951;MQ=80.79;MQ0=0;MQRankSum=-5.724;QD=42.18;ReadPosRankSum=1.766;VQSLOD=5.9235;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,32:33:87.30:1435,87,0	1/1:2,10:12:27.09:450,27,0	0/0:25,0:25:66:0,66,1458	0/0:23,0:22:11.97:0,12,867	1/1:1,24:25:60.20:985,60,0	0/0:21,0:21:60.21:0,60,1335	0/0:34,0:34:96.33:0,96,2138	1/1:1,30:31:90.28:1431,90,0	0/0:40,1:41:73.51:0,74,2638	1/1:0,30:30:90.29:1465,90,0	1/1:0,13:13:36.12:600,36,0	0/0:54,0:54:99:0,160,3517	0/0:27,0:27:75.26:0,75,1700	0/0:32,0:32:93.24:0,93,1964	1/1:1,29:30:72.25:1183,72,0	1/1:1,29:30:78.27:1288,78,0	1/1:1,30:31:63.69:1050,64,0	1/1:0,28:28:72.25:1199,72,0	1/1:1,15:16:45.14:716,45,0	1/1:1,38:39:99:1698,102,0	1/1:3,49:52:99:1954,120,0	1/1:1,20:21:54.18:899,54,0	0/0:23,0:23:69.22:0,69,1518	0/0:37,0:37:99:0,105,2380	1/1:0,27:27:75.26:1247,75,0	1/1:1,24:25:72.21:1125,72,0	1/1:0,28:28:69.24:1148,69,0	1/1:0,12:12:30.10:499,30,0
chr10	40362688	.	T	TGG	4086.74	PASS	AB=0.602;AC=41;AF=0.732;AN=56;BaseQRankSum=4.697;DP=513;FS=7.088;HRun=9;HaplotypeScore=88.7344;InbreedingCoeff=0.5879;MQ=77.82;MQ0=1;MQRankSum=-2.569;QD=10.37;ReadPosRankSum=0.139;VQSLOD=0.8723;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:84.19:0,84,893	1/1:4,0:4:5.97:45,6,0	0/0:13,0:13:25.31:0,25,220	0/0:18,0:18:32.07:0,32,312	0/1:5,0:22:25.53:73,0,26	1/1:3,0:23:10.76:104,11,0	1/1:6,0:26:8.51:96,9,0	1/1:10,6:17:14.97:161,15,0	1/1:2,0:17:3.55:79,4,0	1/1:3,5:10:17.48:190,17,0	1/1:1,7:10:14.02:155,14,0	0/0:35,0:35:96.19:0,96,1013	1/1:3,0:18:24.66:101,25,0	1/1:3,0:15:2.85:76,3,0	1/1:3,1:31:65.15:260,65,0	1/1:2,1:13:26.41:146,26,0	1/1:10,1:39:0.09:171,0,0	1/1:6,18:25:41.61:570,42,0	1/1:15,3:19:20.03:227,20,0	1/1:6,5:11:16.38:190,16,0	0/1:12,14:27:7.41:279,0,7	0/1:4,0:12:14.08:33,0,14	0/0:13,0:13:27.02:0,27,280	0/0:8,0:8:21.02:0,21,214	1/1:2,9:11:15.52:220,16,0	1/1:6,12:20:35.53:466,36,0	1/1:12,3:20:45.47:398,45,0	1/1:0,2:2:3.01:46,3,0
chr10	40362836	.	C	CTGTG	4870.19	PASS	AB=1.000;AC=49;AF=0.980;AN=50;DP=595;FS=0.000;HRun=0;HaplotypeScore=140.9379;InbreedingCoeff=0.1422;MQ=60.39;MQ0=15;QD=8.84;VQSLOD=3.8850;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:21,2:32:9.03:176,9,0	./.	./.	./.	1/1:20,0:20:6.02:90,6,0	1/1:34,0:33:18.04:239,18,0	1/1:33,0:32:6:70,6,0	1/1:28,0:28:21.80:253,22,0	1/1:18,0:18:23.99:254,24,0	1/1:14,0:14:21.51:277,22,0	1/1:8,0:8:9.03:111,9,0	1/1:20,1:22:23.51:310,24,0	1/1:15,0:14:14.99:177,15,0	0/1:19,0:19:0:1,0,0	1/1:10,0:23:9.03:156,9,0	1/1:13,0:25:5.98:72,6,0	1/1:41,0:40:26.97:404,27,0	1/1:18,0:17:17.90:187,18,0	1/1:16,0:15:10.27:121,10,0	1/1:16,0:15:9.02:101,9,0	1/1:36,0:34:21.43:272,21,0	1/1:19,0:18:5.79:47,6,0	1/1:11,0:12:2.74:12,3,0	1/1:22,21:44:34.36:787,34,0	1/1:15,0:15:5.90:85,6,0	1/1:16,0:16:33.20:354,33,0	1/1:17,0:15:18.02:248,18,0	1/1:7,0:6:3.01:66,3,0
chr10	40363074	.	ACACGCGCGCACGCGCGCGCGCG	A	4930.60	PASS	AB=0.997;AC=18;AF=0.333;AN=54;BaseQRankSum=7.756;DP=453;FS=32.472;HRun=0;HaplotypeScore=279.9441;InbreedingCoeff=-0.1888;MQ=60.89;MQ0=0;MQRankSum=-7.516;QD=20.63;ReadPosRankSum=2.010;VQSLOD=2.6593;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:8.32:0,8,95	0/1:5,0:5:62.44:123,0,62	0/0:16,0:15:19.05:0,19,1019	0/0:11,0:8:3.89:0,4,43	0/0:13,0:13:14.77:0,15,248	./.	1/1:12,16:28:3.48:182,3,0	0/0:17,0:17:44.46:0,44,692	1/1:9,15:24:21.07:1272,21,0	0/1:14,0:14:99:270,0,305	0/0:11,0:11:2.51:0,3,28	0/0:27,0:27:49.90:0,50,3214	0/1:15,0:15:1.28:1,0,218	0/1:16,0:16:0.53:121,0,1	0/1:16,0:16:29.73:30,0,74	0/1:22,1:23:99:471,0,162	0/1:16,0:15:25.89:804,0,26	0/1:9,0:9:99:241,0,195	0/1:12,0:12:99:117,0,433	0/1:13,0:13:90.76:441,0,91	0/0:21,0:21:18.47:0,18,275	0/0:17,0:17:2.82:0,3,50	0/0:9,0:9:18.06:0,18,1344	0/0:24,0:24:31.96:0,32,1865	0/1:13,0:13:99:117,0,164	0/1:15,0:15:99:280,0,349	0/1:14,0:14:40.08:248,0,40	0/1:6,0:6:45.43:211,0,45
chr10	40363076	.	ACGCGCGCACGCG	A	5677.14	PASS	AB=1.000;AC=42;AF=0.808;AN=52;BaseQRankSum=4.174;DP=426;FS=22.600;HRun=0;HaplotypeScore=201.8263;InbreedingCoeff=0.4993;MQ=57.23;MQ0=1;MQRankSum=-5.442;QD=17.20;ReadPosRankSum=-1.438;VQSLOD=1.9508;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:18,12:30:3.01:42,3,0	1/1:5,0:5:3.48:98,3,0	0/1:14,0:13:0.14:0,0,486	0/0:8,0:4:0.47:0,0,1	1/1:12,0:12:5.98:59,6,0	./.	1/1:25,0:26:3.01:84,3,0	0/1:17,0:17:27.95:28,0,58	1/1:20,0:23:21.07:587,21,0	1/1:9,4:13:15.02:370,15,0	1/1:9,0:9:3.48:45,3,0	0/0:24,0:24:41.85:0,42,1353	1/1:3,0:15:30.57:820,31,0	1/1:9,0:16:6.48:126,6,0	1/1:15,1:16:9.03:179,9,0	1/1:23,0:23:29.77:699,30,0	1/1:14,2:15:21.07:600,21,0	1/1:7,1:8:11.99:344,12,0	1/1:10,0:10:5.98:119,6,0	1/1:12,0:12:12.04:335,12,0	1/1:20,0:20:2.73:46,3,0	./.	0/0:9,0:9:18.06:0,18,585	0/0:24,0:24:9.71:0,10,752	1/1:10,0:10:11.28:181,11,0	1/1:15,0:15:15.05:330,15,0	1/1:14,0:14:12.04:299,12,0	1/1:6,0:6:12.04:288,12,0
chr10	40363082	.	GCA	G	2139.22	PASS	AB=1.000;AC=48;AF=0.923;AN=52;BaseQRankSum=1.037;DP=371;FS=17.366;HRun=0;HaplotypeScore=157.1655;InbreedingCoeff=0.2637;MQ=52.11;MQ0=1;MQRankSum=-1.220;QD=6.39;ReadPosRankSum=3.416;VQSLOD=2.2595;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:21,6:27:2.97:20,3,0	1/1:2,2:4:2.99:24,3,0	0/0:11,0:9:16.25:0,16,168	0/1:7,0:2:0:0,0,0	1/1:9,3:12:5.93:40,6,0	./.	1/1:17,0:17:2.84:14,3,0	0/1:11,0:11:25.80:28,0,26	1/1:18,0:18:19.89:98,20,0	1/1:10,2:12:14.78:99,15,0	1/1:3,5:8:2.98:21,3,0	1/1:22,0:22:44.73:409,45,0	1/1:19,0:19:2.91:105,3,0	1/1:14,0:13:0.94:6,1,0	1/1:9,5:14:5.82:46,6,0	1/1:11,10:21:26.73:200,27,0	1/1:8,5:12:7.99:112,8,0	1/1:8,1:9:12.41:94,12,0	1/1:9,1:10:5.96:43,6,0	1/1:2,9:11:10.33:54,10,0	1/1:13,3:16:2.99:23,3,0	./.	1/1:9,1:9:17.92:154,18,0	1/1:21,0:21:30.44:319,30,0	1/1:5,5:10:11.73:90,12,0	1/1:9,2:11:11.67:88,12,0	1/1:9,2:11:11.77:81,12,0	1/1:6,1:7:11.73:81,12,0
chr10	40363084	.	ACGCG	A	1267.17	PASS	AB=0.935;AC=34;AF=0.680;AN=50;BaseQRankSum=4.792;DP=292;FS=0.996;HRun=0;HaplotypeScore=146.1436;InbreedingCoeff=0.3726;MQ=53.91;MQ0=2;MQRankSum=-3.885;QD=5.87;ReadPosRankSum=0.160;VQSLOD=2.7778;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:21,0:20:0:0,0,0	1/1:2,0:2:3:28,3,0	0/0:10,0:8:6.01:0,6,60	0/0:7,0:2:0.47:0,0,1	0/1:11,0:11:0:0,0,0	./.	1/1:18,0:18:3:28,3,0	0/0:2,0:2:3.01:0,3,37	1/1:17,0:18:21.02:196,21,0	1/1:6,0:6:9.01:85,9,0	0/1:6,0:6:0:0,0,0	0/1:21,0:21:8.56:9,0,194	0/1:7,11:19:0.23:285,0,0	1/1:6,4:12:6.21:30,6,0	1/1:8,0:8:5.93:45,6,0	1/1:16,0:16:17.65:141,18,0	1/1:9,0:8:8.36:138,8,0	1/1:7,0:7:12.83:126,13,0	1/1:3,0:3:4.82:32,5,0	0/1:10,0:9:0.96:43,0,1	./.	./.	0/0:10,0:9:1.37:0,1,107	0/0:22,0:22:14.32:0,14,94	1/1:8,0:8:3.06:30,3,0	1/1:6,0:6:8.93:73,9,0	1/1:9,0:9:6.01:56,6,0	1/1:5,0:5:5.99:51,6,0
chr10	40363086	.	GCGCGCGCGCGCACACACACACACA	G	6460.09	PASS	AB=1.000;AC=35;AF=0.648;AN=54;BaseQRankSum=4.287;DP=286;FS=22.904;HRun=0;HaplotypeScore=184.2818;InbreedingCoeff=0.5818;MQ=53.03;MQ0=3;MQRankSum=-4.420;QD=38.45;ReadPosRankSum=1.126;VQSLOD=2.5601;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:15,4:20:2.65:65,3,0	1/1:1,1:2:3.48:178,3,0	0/0:10,0:8:15.52:0,16,446	0/0:7,0:2:1.25:0,1,3	1/1:7,3:10:3.01:66,3,0	./.	1/1:18,0:18:3.01:93,3,0	0/0:1,0:1:3.01:0,3,168	1/1:18,0:18:21.07:644,21,0	1/1:4,0:6:12.04:411,12,0	1/1:1,3:6:3.48:46,3,0	0/0:21,0:21:41.79:0,42,2980	0/0:17,0:17:33.44:0,33,604	0/1:13,0:12:19.14:19,0,72	1/1:3,1:8:4.97:141,5,0	1/1:6,2:16:30.05:819,30,0	1/1:4,3:8:21.07:1120,21,0	1/1:5,1:6:5.77:413,6,0	1/1:1,0:2:6.02:204,6,0	1/1:1,8:9:12.04:622,12,0	0/0:2,1:5:0.47:0,0,1	0/0:2,0:5:3.01:0,3,36	0/0:15,0:13:18.06:0,18,1238	0/0:23,0:22:26.17:0,26,1432	1/1:3,4:7:4.68:219,5,0	1/1:4,2:6:14.97:517,15,0	1/1:3,1:5:12.04:483,12,0	1/1:4,1:5:11.53:401,12,0
chr10	40363096	.	GCACACACACACACA	G	3190.77	PASS	AB=1.000;AC=29;AF=0.558;AN=52;BaseQRankSum=5.511;DP=330;FS=12.983;HRun=0;HaplotypeScore=166.8440;InbreedingCoeff=0.4189;MQ=40.61;MQ0=8;MQRankSum=-3.523;QD=17.93;ReadPosRankSum=3.116;VQSLOD=1.3646;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:26:1.96:45,2,0	1/1:4,0:4:2.83:111,3,0	0/0:2,0:1:3.01:0,3,106	0/0:6,0:1:0.89:0,1,2	./.	0/0:16,0:15:3.47:0,3,27	1/1:27,0:22:2.50:9,2,0	0/1:5,0:4:50.56:51,0,120	0/1:23,0:23:29.22:29,0,140	0/1:12,0:12:83.65:225,0,84	./.	0/0:19,0:19:35.92:0,36,1445	0/0:23,0:22:42.54:0,43,884	0/0:17,0:16:8.96:0,9,147	1/1:10,0:9:2.51:63,3,0	1/1:14,0:14:16.42:371,16,0	1/1:10,0:9:24:683,24,0	1/1:5,0:6:5.29:347,5,0	1/1:5,0:4:8.06:142,8,0	1/1:14,0:12:12.04:359,12,0	0/0:11,0:11:0.47:0,0,1	0/0:6,0:6:3.01:0,3,39	0/0:15,0:13:12.03:0,12,559	0/0:19,0:18:14.68:0,15,508	1/1:7,0:7:2.18:109,2,0	1/1:4,0:4:8.99:297,9,0	1/1:2,0:2:6.02:224,6,0	1/1:6,0:6:14.93:288,15,0
chr10	40363111	.	C	CAGAGAG	3384.30	PASS	AB=0.899;AC=44;AF=0.880;AN=50;BaseQRankSum=-1.173;DP=475;FS=7.204;HRun=0;HaplotypeScore=208.3480;InbreedingCoeff=0.0745;MQ=36.37;MQ0=9;MQRankSum=-2.644;QD=7.54;ReadPosRankSum=-0.549;VQSLOD=1.7384;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:32:5.35:5,0,108	1/1:8,0:8:6.16:82,6,0	./.	0/1:6,0:2:0:0,0,0	./.	0/1:16,1:16:17.10:17,0,33	0/1:21,5:21:13.87:90,0,14	1/1:21,0:20:30.87:399,31,0	0/1:26,2:28:7.10:134,0,7	1/1:17,0:17:36.02:525,36,0	./.	1/1:18,3:23:0.47:1,0,0	1/1:26,1:29:18.05:341,18,0	1/1:16,4:22:3.01:82,3,0	1/1:18,0:17:11.23:139,11,0	1/1:23,0:22:18.01:196,18,0	1/1:15,0:13:6.49:94,6,0	1/1:8,0:8:14.12:159,14,0	1/1:16,0:15:8.94:205,9,0	1/1:20,0:17:2.99:24,3,0	1/1:18,0:16:6:74,6,0	1/1:17,0:17:6:83,6,0	1/1:18,0:16:3.01:69,3,0	0/1:10,1:18:0.19:0,0,0	1/1:14,0:13:3.01:50,3,0	1/1:14,0:13:21.17:383,21,0	1/1:7,0:7:6:98,6,0	1/1:10,0:10:11.34:134,11,0
chr10	40363585	.	CTGTGTGTG	C	598.92	PASS	AB=0.901;AC=11;AF=0.212;AN=52;BaseQRankSum=3.509;DP=616;FS=0.921;HRun=0;HaplotypeScore=154.8294;InbreedingCoeff=0.3501;MQ=61.03;MQ0=17;MQRankSum=-4.789;QD=3.22;ReadPosRankSum=-1.620;VQSLOD=2.4330;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:56:51.13:0,51,971	0/0:13,0:13:18.06:0,18,584	./.	./.	0/0:17,0:15:24.05:0,24,407	1/1:16,4:21:12:226,12,0	1/1:17,6:22:5.95:87,6,0	0/1:23,0:22:0.26:0,0,35	1/1:13,8:23:18.06:372,18,0	0/0:22,0:21:27.54:0,28,453	0/0:6,0:6:6.01:0,6,98	0/1:24,1:26:3.80:4,0,265	0/0:12,0:18:12.98:0,13,418	0/0:21,0:24:24.08:0,24,666	0/0:27,0:27:36.12:0,36,1134	0/0:18,0:18:18.05:0,18,335	0/0:40,0:42:75.67:0,76,1828	0/0:28,0:27:39.07:0,39,1170	0/0:15,0:13:9.28:0,9,84	0/1:9,1:17:0.44:0,0,106	0/1:35,0:38:37.66:38,0,146	0/0:15,0:14:18.04:0,18,471	0/0:10,0:13:6.02:0,6,136	0/0:22,0:26:34.20:0,34,503	0/0:11,0:12:1.22:0,1,62	0/0:14,0:19:2.13:0,2,117	0/0:9,0:8:1.27:0,1,38	0/1:13,0:10:6.43:6,0,96
chr10	40363631	.	G	GGT	207.18	PASS	AB=0.767;AC=2;AF=0.036;AN=56;BaseQRankSum=3.061;DP=666;FS=0.000;HRun=0;HaplotypeScore=111.5745;InbreedingCoeff=-0.0119;MQ=58.38;MQ0=33;MQRankSum=-0.904;QD=2.62;ReadPosRankSum=-0.270;VQSLOD=2.2693;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:12,36:49:14.12:280,0,14	0/0:13,0:13:18.04:0,18,214	0/0:32,0:13:34.85:0,35,378	0/1:28,0:11:9.45:9,0,155	0/0:16,0:13:27.04:0,27,338	0/0:27,0:27:60.01:0,60,673	0/0:26,0:24:36.25:0,36,430	0/0:22,0:21:48.13:0,48,585	0/0:24,0:23:47.95:0,48,522	0/0:20,0:18:51.12:0,51,623	0/0:6,0:4:9.03:0,9,113	0/0:30,0:29:53.08:0,53,608	0/0:28,0:26:51.09:0,51,669	0/0:16,0:16:10:0,10,253	0/0:29,0:29:60:0,60,758	0/0:21,0:21:47.75:0,48,606	0/0:36,0:35:73.45:0,73,845	0/0:30,0:28:72.18:0,72,870	0/0:12,0:9:18.05:0,18,219	0/0:17,0:17:32.98:0,33,386	0/0:44,0:43:93.11:0,93,1140	0/0:17,0:16:30.97:0,31,365	0/0:16,0:15:30.08:0,30,355	0/0:31,0:29:53.66:0,54,611	0/0:17,0:15:33.07:0,33,378	0/0:19,0:19:41.26:0,41,509	0/0:17,0:17:40:0,40,482	0/0:18,0:16:5.70:0,6,310
chr10	40364673	.	AAAC	A	13096.24	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=15.150;DP=716;FS=4.741;HRun=0;HaplotypeScore=108.0519;InbreedingCoeff=0.9995;MQ=72.71;MQ0=0;MQRankSum=0.971;QD=31.48;ReadPosRankSum=0.856;VQSLOD=4.8833;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:93.26:0,93,1803	1/1:3,11:14:27.01:350,27,0	0/0:27,0:27:33.10:0,33,524	0/0:20,0:20:26.31:0,26,651	1/1:3,25:28:71.97:883,72,0	0/0:29,0:29:78.25:0,78,1544	0/0:27,0:27:72.25:0,72,1432	1/1:13,24:37:75.23:1050,75,0	0/0:22,0:22:57.18:0,57,1113	1/1:2,23:25:69.22:983,69,0	1/1:2,10:12:30.01:389,30,0	0/0:36,0:36:93.30:0,93,1804	0/0:21,0:21:53.98:0,54,991	0/0:22,0:22:54.17:0,54,1076	1/1:3,27:30:66.14:924,66,0	1/1:2,25:27:60.20:884,60,0	1/1:4,13:17:33.11:486,33,0	1/1:2,24:26:66.22:972,66,0	1/1:7,19:26:54.12:711,54,0	1/1:2,20:22:60.07:786,60,0	1/1:6,30:36:66.22:972,66,0	1/1:5,21:26:54.18:795,54,0	0/0:22,0:22:54.16:0,54,1016	0/0:33,0:33:75.25:0,75,1524	1/1:4,16:20:39.09:550,39,0	1/1:4,17:21:51.15:727,51,0	1/1:5,29:34:75.04:1104,75,0	1/1:1,14:15:36.12:530,36,0
chr10	40366328	.	T	TGAGAGAGA	658.55	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-0.241;DP=633;FS=0.976;HRun=0;HaplotypeScore=208.8042;InbreedingCoeff=0.9186;MQ=65.78;MQ0=8;MQRankSum=0.345;QD=11.35;ReadPosRankSum=-2.069;VQSLOD=2.3307;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:74.93:0,75,1344	0/0:9,0:9:21.07:0,21,372	0/0:19,0:8:21:0,21,287	0/0:39,0:22:43.19:0,43,559	0/0:22,0:22:48.54:0,49,688	1/1:11,0:12:5.93:64,6,0	1/1:23,0:23:28.21:294,28,0	0/0:20,0:19:57.10:0,57,854	1/1:7,11:23:6.32:428,6,0	0/0:17,0:17:48.02:0,48,882	0/0:19,0:19:32.94:0,33,490	0/0:17,0:17:48.15:0,48,1009	0/0:30,0:30:72.17:0,72,1156	0/0:18,0:18:42.57:0,43,689	0/0:31,0:31:74.91:0,75,1279	0/0:30,0:30:65.70:0,66,1325	0/0:20,0:20:47.59:0,48,595	0/0:22,0:22:57.56:0,58,1014	0/0:19,0:19:57.15:0,57,978	0/0:18,0:18:39.17:0,39,576	0/0:35,0:34:36.41:0,36,503	0/0:20,0:20:48.12:0,48,836	0/0:14,0:14:33.11:0,33,754	0/0:34,0:34:96.32:0,96,2238	0/0:22,0:22:50.14:0,50,748	0/0:27,0:26:80.85:0,81,1294	0/0:27,0:27:69.18:0,69,1344	0/0:14,0:13:32.75:0,33,647
chr10	40366330	.	TGAGAGA	T	5385.23	PASS	AC=34;AF=0.630;AN=54;BaseQRankSum=8.266;DP=639;FS=0.000;HRun=0;HaplotypeScore=163.2627;InbreedingCoeff=0.9066;MQ=62.87;MQ0=9;MQRankSum=-10.868;QD=14.88;ReadPosRankSum=-1.184;VQSLOD=3.7173;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:36:45.15:0,45,1367	1/1:3,7:10:14.98:308,15,0	./.	0/0:41,0:22:8.81:0,9,131	1/1:12,7:21:21.96:392,22,0	0/0:17,0:17:3.42:0,3,80	0/0:28,0:28:18.81:0,19,500	1/1:19,0:18:3.01:31,3,0	0/0:22,0:22:15.05:0,15,367	1/1:10,1:16:18.06:266,18,0	1/1:10,7:19:8.96:163,9,0	0/0:17,0:18:30.10:0,30,825	0/0:18,0:30:44.70:0,45,1223	0/0:13,0:18:21.07:0,21,596	1/1:16,12:31:33.05:618,33,0	1/1:16,12:29:30.10:596,30,0	1/1:11,5:19:12.04:187,12,0	1/1:13,7:22:21.07:391,21,0	1/1:13,0:17:12.04:168,12,0	1/1:8,0:17:21.07:288,21,0	1/1:23,0:33:14.99:188,15,0	1/1:9,9:19:24.55:473,25,0	0/0:11,0:14:27.09:0,27,703	0/0:34,0:36:80.50:0,81,2442	1/1:11,0:20:18.06:250,18,0	1/1:20,1:26:21.07:313,21,0	1/1:12,0:27:33.11:461,33,0	1/1:6,0:14:21.07:293,21,0
chr10	40368386	.	ATG	A	1572.19	PASS	AB=0.970;AC=24;AF=0.429;AN=56;BaseQRankSum=11.026;DP=800;FS=62.004;HRun=0;HaplotypeScore=248.7277;InbreedingCoeff=-0.1164;MQ=43.33;MQ0=15;MQRankSum=-5.184;QD=3.37;ReadPosRankSum=1.604;VQSLOD=0.6125;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:35,0:35:21.94:251,22,0	1/1:17,1:17:1.92:26,2,0	0/0:47,1:19:7.10:0,7,757	0/1:37,5:15:99:112,0,571	0/0:24,0:24:6.44:0,6,61	1/1:13,3:16:1.71:5,2,0	0/1:35,2:36:16.71:19,0,17	0/1:19,0:13:84.41:88,0,84	0/1:18,4:22:17.22:97,0,17	1/1:38,0:38:53.59:414,54,0	0/0:20,0:20:5.09:0,5,56	0/0:42,0:42:82.18:0,82,1955	0/0:37,0:37:99:0,108,2070	0/0:34,0:34:86.98:0,87,1704	0/1:37,0:37:4.17:12,0,4	0/1:28,0:28:20.03:56,0,20	1/1:22,0:22:2.14:85,2,0	0/1:9,0:9:12.68:13,0,13	0/1:14,1:15:73.63:110,0,74	0/1:24,0:24:12:12,0,24	0/0:35,0:35:0.72:0,1,31	0/1:22,1:23:12.76:78,0,13	0/0:35,0:35:77.52:0,78,1465	0/0:58,0:58:99:0,160,3111	0/1:29,0:28:16.57:17,0,20	0/1:24,0:24:25.94:191,0,26	0/1:20,0:20:48.36:94,0,48	0/1:9,0:9:5.43:56,0,5
chr10	40368388	.	G	GCA	721.81	PASS	AB=0.996;AC=24;AF=0.429;AN=56;BaseQRankSum=6.243;DP=822;FS=3.219;HRun=0;HaplotypeScore=262.4719;InbreedingCoeff=0.2429;MQ=42.62;MQ0=15;MQRankSum=-1.332;QD=1.55;ReadPosRankSum=-4.111;VQSLOD=2.0085;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:33,1:34:13.50:47,14,0	0/0:18,0:17:4.48:0,4,15	0/0:47,0:18:23.10:0,23,410	0/0:43,0:15:17.99:0,18,221	1/1:25,0:25:10.40:76,10,0	0/1:20,1:21:5.78:15,0,6	1/1:38,2:39:14.58:158,15,0	0/0:21,0:14:2:0,2,17	1/1:24,0:24:21.40:189,21,0	0/1:37,0:37:95.62:96,0,125	0/1:20,0:20:0:0,0,0	0/0:42,0:42:93.17:0,93,1175	0/0:37,0:37:99:0,111,1398	0/0:36,0:36:89.94:0,90,1152	0/1:37,0:37:2.08:39,0,2	0/1:29,0:29:10.60:33,0,11	0/0:22,0:22:2.67:0,3,12	0/1:9,0:9:10.03:10,0,14	0/1:16,0:16:6.29:6,0,29	0/1:25,0:25:0:3,0,0	1/1:40,0:39:1.82:5,2,0	1/1:24,0:24:11.96:101,12,0	0/0:33,0:33:61.97:0,62,791	0/0:57,0:57:99:0,126,1602	0/1:29,0:28:0:0,0,0	0/1:25,0:25:29.81:30,0,62	0/1:19,0:19:37.95:68,0,38	0/1:12,0:12:8.68:13,0,9
chr10	40368390	.	ACACACATACG	A	4487.84	PASS	AB=0.923;AC=35;AF=0.673;AN=52;BaseQRankSum=10.884;DP=822;FS=11.059;HRun=0;HaplotypeScore=313.6045;InbreedingCoeff=0.7097;MQ=42.18;MQ0=14;MQRankSum=-8.669;QD=9.47;ReadPosRankSum=-2.359;VQSLOD=1.7204;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:32,0:32:24.75:25,0,595	1/1:18,0:17:5.60:67,6,0	0/0:46,0:18:22.91:0,23,680	0/0:46,0:15:20.88:0,21,467	1/1:25,0:25:17.99:171,18,0	0/1:14,6:20:2.38:10,0,2	1/1:35,6:40:14.93:246,15,0	0/1:21,0:14:0.32:184,0,0	1/1:11,12:23:6.50:328,6,0	1/1:34,2:36:93.61:1146,94,0	./.	0/0:43,0:43:96.31:0,96,3479	0/0:39,0:39:99:0,114,4275	0/0:36,0:36:90.18:0,90,3618	1/1:35,0:35:8.72:80,9,0	1/1:29,0:29:23.54:272,24,0	1/1:21,0:21:22.43:178,22,0	1/1:9,0:9:17.93:166,18,0	1/1:15,0:15:32.86:313,33,0	1/1:27,0:27:4.81:30,5,0	1/1:42,0:41:1.21:3,1,0	1/1:22,0:22:14.96:162,15,0	0/0:32,0:32:67.78:0,68,2251	0/0:56,0:56:99:0,129,4554	./.	1/1:27,0:27:53.20:520,53,0	1/1:17,2:19:38.76:482,39,0	1/1:12,0:12:10.09:104,10,0
chr10	40368392	.	ACACATACG	A	8539.04	PASS	AB=0.764;AC=36;AF=0.643;AN=56;BaseQRankSum=7.697;DP=809;FS=12.868;HRun=0;HaplotypeScore=275.7072;InbreedingCoeff=0.7572;MQ=41.62;MQ0=15;MQRankSum=-8.573;QD=17.46;ReadPosRankSum=-2.483;VQSLOD=2.2698;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:30:51.41:51,0,316	1/1:3,15:17:5.95:167,6,0	0/0:45,0:15:24.99:0,25,642	0/0:48,0:13:20.98:0,21,508	1/1:8,17:25:17.64:296,18,0	0/0:21,0:21:5.54:0,6,58	1/1:39,0:39:14.94:145,15,0	1/1:18,3:14:19.31:464,19,0	1/1:22,0:22:4.78:241,5,0	1/1:12,23:35:96.31:2281,96,0	0/1:6,15:21:0:0,0,0	0/0:43,0:43:96.31:0,96,3048	0/0:39,0:39:99:0,114,4096	0/0:35,0:35:90.19:0,90,3475	1/1:13,21:34:8.67:130,9,0	1/1:12,19:31:26.83:570,27,0	1/1:6,15:21:23.45:401,23,0	1/1:5,3:8:18.03:364,18,0	1/1:9,5:14:33.04:609,33,0	1/1:8,18:26:6.01:72,6,0	0/1:39,3:41:0:0,0,0	1/1:10,11:21:14.93:178,15,0	0/0:31,0:31:68.44:0,68,2046	0/0:58,0:58:99:0,141,4212	0/1:4,23:26:0:0,0,0	1/1:7,18:25:60.20:1374,60,0	1/1:5,10:16:39.06:870,39,0	1/1:3,9:12:14.73:325,15,0
chr10	40368395	.	CAT	C	2543.60	PASS	AB=0.988;AC=35;AF=0.625;AN=56;BaseQRankSum=13.706;DP=804;FS=13.094;HRun=0;HaplotypeScore=247.5711;InbreedingCoeff=0.8108;MQ=41.59;MQ0=15;MQRankSum=-5.975;QD=5.49;ReadPosRankSum=-0.328;VQSLOD=1.3101;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:15,15:30:50.19:627,50,0	1/1:16,0:16:5.70:31,6,0	0/0:46,0:16:45.08:0,45,653	0/0:47,0:11:20.93:0,21,280	1/1:26,0:26:7.97:69,8,0	0/0:21,0:21:4.21:0,4,23	1/1:38,0:37:14.49:106,14,0	1/1:21,0:14:18.38:100,18,0	1/1:23,0:23:18.15:161,18,0	1/1:34,0:34:89.66:534,90,0	0/0:19,0:19:0:0,0,1	0/0:43,0:43:99:0,102,1815	0/0:39,0:39:99:0,113,2083	0/0:35,0:35:90.31:0,90,1712	1/1:34,0:34:8.71:62,9,0	1/1:31,0:31:22.83:129,23,0	1/1:20,0:20:20.38:108,20,0	1/1:8,0:8:14.60:88,15,0	1/1:15,0:15:11.99:142,12,0	0/1:25,1:26:0.21:0,0,1	0/1:38,0:37:0:0,0,0	1/1:22,0:22:12.35:85,12,0	0/0:31,0:31:67.78:0,68,1231	0/0:60,0:60:99:0,153,2565	0/1:27,0:26:0.15:1,0,0	1/1:25,0:25:31.40:275,31,0	1/1:16,0:16:29.86:162,30,0	1/1:12,0:12:10.53:56,11,0
chr10	40368396	.	ATACG	A	5231.93	PASS	AB=0.981;AC=36;AF=0.643;AN=56;BaseQRankSum=11.900;DP=792;FS=9.362;HRun=0;HaplotypeScore=252.2721;InbreedingCoeff=0.8107;MQ=41.61;MQ0=15;MQRankSum=-7.457;QD=11.50;ReadPosRankSum=-1.457;VQSLOD=2.7995;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:28,2:30:51.05:489,51,0	1/1:16,1:16:5.94:67,6,0	0/0:45,0:15:41.92:0,42,684	0/0:46,1:10:21.03:0,21,391	1/1:26,0:26:20:217,20,0	0/0:20,0:20:6.09:0,6,70	1/1:38,0:37:15.03:189,15,0	1/1:22,0:15:2.26:244,2,0	1/1:24,0:24:9.44:202,9,0	1/1:34,1:35:96.72:1163,97,0	0/0:18,0:18:0.47:0,0,1	0/0:43,0:43:99:0,105,2059	0/0:39,0:39:99:0,114,2950	0/0:36,0:36:96.20:0,96,2542	1/1:33,0:33:8.73:81,9,0	1/1:30,0:30:26.42:305,26,0	1/1:19,0:19:25.25:239,25,0	1/1:8,0:8:20.99:227,21,0	1/1:14,0:14:33.96:394,34,0	1/1:26,0:26:3.36:25,3,0	0/1:35,0:34:0.07:0,0,0	1/1:22,0:22:17.32:224,17,0	0/0:31,0:31:68.72:0,69,1305	0/0:58,0:58:99:0,156,2953	0/1:25,1:25:0.15:0,0,0	1/1:22,0:22:51.59:616,52,0	1/1:16,0:16:38.97:402,39,0	1/1:12,0:12:14.97:147,15,0
chr10	40368412	.	GCA	G	347.71	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-1.466;DP=818;FS=0.000;HRun=0;HaplotypeScore=246.1482;InbreedingCoeff=0.6761;MQ=42.12;MQ0=19;MQRankSum=2.301;QD=4.35;ReadPosRankSum=-4.112;VQSLOD=2.0932;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:51.91:0,52,645	0/0:18,0:17:11.64:0,12,111	0/0:29,0:8:14.99:0,15,203	0/0:29,0:4:9.03:0,9,142	0/0:22,0:21:3.01:0,3,44	1/1:19,6:25:3.12:170,3,0	1/1:25,7:32:11.84:135,12,0	0/0:30,0:25:53.69:0,54,756	1/1:11,12:23:7.85:162,8,0	0/0:45,0:45:22.21:0,22,904	0/0:22,0:22:15.04:0,15,205	0/0:46,0:46:97.39:0,97,1681	0/0:44,0:44:99:0,114,1803	0/0:36,0:36:96.27:0,96,1548	0/0:30,0:30:17.95:0,18,252	0/0:36,0:34:42.38:0,42,572	0/0:19,0:19:23.73:0,24,246	0/0:6,0:6:15:0,15,168	0/0:24,0:21:53.91:0,54,650	0/0:24,0:23:6.02:0,6,100	0/0:56,0:47:2.87:0,3,38	0/0:27,0:27:18.06:0,18,287	0/0:29,0:29:55.73:0,56,866	0/0:55,0:55:99:0,111,1843	0/0:25,0:24:5.59:0,6,98	0/0:26,0:22:50.60:0,51,539	0/0:18,0:18:35.53:0,36,368	0/0:12,0:12:15:0,15,154
chr10	40368456	.	GCA	G	9955.86	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=1.211;DP=830;FS=4.586;HRun=0;HaplotypeScore=194.3099;InbreedingCoeff=0.8544;MQ=42.75;MQ0=28;MQRankSum=-2.252;QD=15.11;ReadPosRankSum=2.419;VQSLOD=4.6171;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,2:36:31.38:0,31,1054	1/1:6,8:13:18.06:219,18,0	0/0:21,0:4:8.96:0,9,85	0/0:22,1:2:3.01:0,3,50	1/1:7,15:22:15.01:190,15,0	0/0:25,0:24:29.80:0,30,455	0/0:34,2:33:45.12:0,45,740	1/1:14,31:40:66.32:867,66,0	0/0:24,1:25:41.16:0,41,639	1/1:19,21:34:23.79:775,24,0	1/1:3,15:18:21.07:265,21,0	1/1:9,36:43:72.21:885,72,0	1/1:13,20:34:57.14:718,57,0	1/1:17,20:35:53.65:638,54,0	1/1:7,34:40:38.96:492,39,0	1/1:11,26:33:51.09:644,51,0	1/1:2,21:23:44.83:546,45,0	1/1:2,10:12:2.92:262,3,0	1/1:7,7:12:9.99:223,10,0	1/1:4,7:9:6.02:76,6,0	1/1:27,56:76:18.97:229,19,0	1/1:5,27:32:33.11:417,33,0	1/1:5,16:19:13.29:220,13,0	1/1:10,42:52:66.21:833,66,0	1/1:5,6:11:6:76,6,0	1/1:10,17:25:51.16:638,51,0	1/1:6,12:18:33.05:409,33,0	1/1:5,11:17:16.69:334,17,0
chr10	40368469	.	CAT	C	3662.64	PASS	AB=0.988;AC=35;AF=0.625;AN=56;BaseQRankSum=4.158;DP=894;FS=1.700;HRun=0;HaplotypeScore=233.1895;InbreedingCoeff=0.2827;MQ=41.23;MQ0=32;MQRankSum=2.515;QD=5.55;ReadPosRankSum=8.663;VQSLOD=2.4507;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:66.70:0,67,1338	1/1:13,1:12:15.43:143,15,0	0/0:49,0:13:35.75:0,36,365	0/0:62,0:12:28.81:0,29,223	1/1:19,1:19:14.14:70,14,0	0/0:25,0:24:38.77:0,39,573	0/0:34,0:31:47.84:0,48,815	0/1:45,0:39:99:270,0,119	0/0:23,0:23:42.01:0,42,715	0/1:49,0:43:99:243,0,135	1/1:17,0:17:19.67:92,20,0	0/1:41,2:41:12.60:328,0,13	0/1:30,0:30:28.31:235,0,28	1/1:36,1:35:14.12:243,14,0	1/1:45,1:45:36.50:185,37,0	1/1:34,0:31:47.82:230,48,0	1/1:26,0:26:41.01:262,41,0	0/1:13,0:13:12.64:89,0,13	0/1:15,0:13:55.24:55,0,62	1/1:12,0:9:5.60:26,6,0	0/1:85,1:78:20.83:58,0,21	1/1:34,1:35:30.82:143,31,0	1/1:22,0:19:9.15:80,9,0	1/1:45,0:45:45.18:303,45,0	1/1:7,1:8:5.42:26,5,0	0/1:27,0:26:60.15:217,0,60	0/1:19,1:20:12.82:176,0,13	1/1:15,1:16:26.45:190,26,0
chr10	40368493	.	C	CGT	8328.60	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=2.368;DP=876;FS=8.825;HRun=0;HaplotypeScore=230.0196;InbreedingCoeff=0.8999;MQ=41.00;MQ0=22;MQRankSum=-1.115;QD=17.68;ReadPosRankSum=2.566;VQSLOD=3.5673;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:45,0:45:90.65:1134,91,0	1/1:13,0:11:0.86:247,1,0	0/0:68,0:20:46.32:0,46,401	0/0:80,0:19:20.64:0,21,279	1/1:23,0:20:11.91:193,12,0	0/0:17,0:17:26.78:0,27,308	0/0:34,0:31:17.66:0,18,389	1/1:25,0:21:3.35:513,3,0	0/0:23,0:23:35.67:0,36,367	1/1:44,0:40:59.40:1115,59,0	1/1:14,0:12:21.07:336,21,0	0/0:51,0:49:99:0,109,1441	0/0:30,0:30:65.69:0,66,763	0/0:36,0:34:70.64:0,71,757	1/1:45,0:45:47.74:671,48,0	1/1:31,0:30:28.50:674,29,0	1/1:19,3:24:32.66:375,33,0	1/1:11,0:12:26.37:336,26,0	1/1:12,0:12:27.01:316,27,0	1/1:19,0:17:6.02:84,6,0	1/1:59,7:65:24.09:383,24,0	1/1:27,0:27:27.08:413,27,0	0/0:14,0:11:17.97:0,18,215	0/0:52,0:51:81.12:0,81,1078	1/1:11,0:9:5.96:98,6,0	1/1:21,1:22:63.10:744,63,0	1/1:23,0:23:48.65:501,49,0	1/1:13,0:12:15.57:195,16,0
chr10	40368496	.	GCACA	G	4126.64	PASS	AB=0.707;AC=33;AF=0.611;AN=54;BaseQRankSum=5.982;DP=854;FS=4.914;HRun=0;HaplotypeScore=251.0107;InbreedingCoeff=0.6444;MQ=41.21;MQ0=23;MQRankSum=-5.434;QD=8.16;ReadPosRankSum=1.487;VQSLOD=2.6383;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:44:22.13:361,0,22	1/1:6,3:11:15.03:178,15,0	0/0:64,0:18:18.53:0,19,366	0/0:79,0:18:18.53:0,19,374	0/1:8,13:19:0.27:1,0,0	0/0:9,0:16:15.74:0,16,133	0/0:20,0:33:17.58:0,18,310	1/1:18,1:15:6.01:76,6,0	0/0:11,0:25:25.48:0,25,418	1/1:27,12:39:48.14:699,48,0	./.	0/0:49,0:51:89.29:0,89,1907	1/1:16,10:31:15.44:355,15,0	1/1:22,12:36:48.13:687,48,0	1/1:19,20:45:5.17:43,5,0	1/1:17,9:28:5.88:76,6,0	1/1:18,5:24:11.86:192,12,0	0/1:8,3:12:28.03:145,0,28	1/1:8,3:12:9.03:144,9,0	1/1:7,8:17:3.01:39,3,0	1/1:61,3:61:4.12:25,4,0	0/1:17,4:24:0:0,0,0	0/0:14,0:12:14.57:0,15,345	0/0:43,2:47:14.10:0,14,1266	0/1:6,4:9:0:0,0,0	1/1:13,8:22:27.08:412,27,0	1/1:10,10:22:28.91:437,29,0	1/1:2,7:9:19.88:260,20,0
chr10	40369938	.	TA	T	1173.24	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.260;DP=591;FS=0.571;HRun=7;HaplotypeScore=57.8895;InbreedingCoeff=0.9995;MQ=74.98;MQ0=0;MQRankSum=-0.166;QD=24.44;ReadPosRankSum=1.307;VQSLOD=3.8837;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,108,1337	0/0:15,0:15:45.14:0,45,566	0/0:24,1:25:42.32:0,42,558	0/0:16,0:15:33.10:0,33,398	0/0:19,0:19:45.13:0,45,553	1/1:0,11:11:30.07:306,30,0	1/1:1,14:15:42.10:428,42,0	0/0:27,0:27:78.24:0,78,960	1/1:3,19:22:57.13:582,57,0	0/0:28,0:28:78.24:0,78,970	0/0:23,0:23:54.95:0,55,769	0/0:19,0:19:54.13:0,54,641	0/0:18,0:18:54.17:0,54,679	0/0:16,0:16:42.11:0,42,503	0/0:25,0:25:69.19:0,69,831	0/0:21,0:21:57.17:0,57,705	0/0:24,0:24:66.19:0,66,815	0/0:16,0:16:48.09:0,48,584	0/0:20,0:20:57.14:0,57,679	0/0:27,0:27:78.23:0,78,957	0/0:14,0:14:39.10:0,39,466	0/0:15,0:15:45.13:0,45,553	0/0:19,0:19:54.17:0,54,679	0/0:11,0:11:30.10:0,30,377	0/0:23,0:23:60.19:0,60,755	0/0:36,0:36:93.30:0,93,1170	0/0:30,0:30:90.28:0,90,1120	0/0:17,0:17:51.13:0,51,613
chr10	40372876	.	T	TTAA	911.54	PASS	AB=0.670;AC=19;AF=0.339;AN=56;BaseQRankSum=9.470;DP=463;FS=10.576;HRun=0;HaplotypeScore=82.9153;InbreedingCoeff=-0.3678;MQ=53.22;MQ0=12;MQRankSum=-5.187;QD=2.90;ReadPosRankSum=-1.052;VQSLOD=0.8631;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:7,0:20:0.88:1,0,99	0/1:5,0:6:52.20:54,0,52	0/0:17,0:8:6.55:0,7,56	0/0:15,0:6:14.40:0,14,153	0/1:11,0:26:55.32:55,0,92	0/0:20,0:21:63.05:0,63,896	0/0:10,0:10:23.86:0,24,357	0/1:13,0:24:99:212,0,124	0/0:10,0:10:17.72:0,18,199	0/1:7,0:14:23.85:24,0,109	0/1:7,0:17:31.32:31,0,129	0/0:1,0:9:8.85:0,9,60	0/0:16,0:17:21.18:0,21,321	0/0:7,0:7:20.94:0,21,217	0/1:11,0:22:58.88:59,0,155	0/1:7,0:14:28.67:29,0,108	0/1:9,0:32:40.10:40,0,129	0/0:9,0:20:0.46:0,0,113	0/1:9,0:17:93.66:115,0,94	0/1:14,0:14:97.94:98,0,113	0/1:6,0:16:12.25:12,0,73	1/1:4,0:6:7.79:77,8,0	0/1:4,0:16:0.21:0,0,171	0/0:5,0:18:3.08:0,3,76	0/1:5,1:10:17.88:72,0,18	0/1:10,0:23:73.92:74,0,199	0/1:8,0:17:76.73:104,0,77	0/1:6,0:11:6.24:6,0,57
chr10	40374281	.	T	TAAAAAAA	7834.18	PASS	AB=1.000;AC=43;AF=0.768;AN=56;BaseQRankSum=4.824;DP=519;FS=6.364;HRun=10;HaplotypeScore=108.7957;InbreedingCoeff=0.7921;MQ=60.50;MQ0=0;MQRankSum=-3.348;QD=18.52;ReadPosRankSum=-2.434;VQSLOD=0.9163;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:5,0:40:50.65:392,51,0	1/1:4,0:11:9.03:169,9,0	0/1:12,0:14:26.99:27,0,335	0/0:6,0:4:8.89:0,9,154	1/1:4,10:16:24.04:521,24,0	1/1:3,0:18:35.67:262,36,0	1/1:1,0:18:30.14:198,30,0	1/1:17,4:31:30.07:590,30,0	1/1:2,0:15:27.18:178,27,0	1/1:6,1:21:31.74:506,32,0	1/1:7,1:19:20.96:392,21,0	0/0:13,0:13:30.02:0,30,550	0/0:24,0:24:59.97:0,60,1166	0/0:20,0:20:33.70:0,34,1008	1/1:9,18:29:6.02:219,6,0	1/1:5,6:13:6.02:219,6,0	1/1:17,0:17:21.05:414,21,0	1/1:4,0:15:15.05:411,15,0	1/1:18,0:16:26.98:584,27,0	1/1:3,0:15:24.01:404,24,0	1/1:5,0:5:6.02:189,6,0	1/1:7,1:12:8.99:179,9,0	0/0:13,0:13:36.02:0,36,641	0/0:20,0:20:54.11:0,54,960	1/1:5,2:18:9.03:299,9,0	1/1:10,13:24:39.03:746,39,0	1/1:12,12:30:12.51:394,13,0	1/1:5,10:18:18.06:542,18,0
chr10	40376166	.	G	GTTT	801.52	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=8.718;DP=697;FS=0.552;HRun=1;HaplotypeScore=133.6217;InbreedingCoeff=0.8735;MQ=72.69;MQ0=0;MQRankSum=-0.907;QD=6.12;ReadPosRankSum=3.308;VQSLOD=-0.6252;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,1:57:0.38:322,0,0	0/0:15,0:15:36.10:0,36,605	0/0:19,0:15:32.45:0,32,522	0/0:15,0:12:32.70:0,33,373	0/0:22,0:22:54.35:0,54,770	0/0:25,0:25:66.18:0,66,1079	0/0:30,0:30:84.22:0,84,1350	0/0:36,0:36:92.71:0,93,1368	0/0:32,0:32:84.15:0,84,1410	0/0:20,0:20:54.09:0,54,864	0/0:17,0:17:41.88:0,42,673	1/1:4,0:27:3.89:126,4,0	0/0:35,0:35:93.22:0,93,1527	0/0:26,0:26:63.06:0,63,1079	0/0:32,0:32:87.28:0,87,1549	0/0:24,0:24:63.15:0,63,1022	0/0:22,0:22:60.18:0,60,1023	0/0:20,0:20:57.19:0,57,980	0/0:15,0:15:43.33:0,43,524	0/0:22,0:22:57.80:0,58,717	0/0:27,0:27:63.05:0,63,865	0/0:25,0:25:75.16:0,75,1269	1/1:8,0:18:16.36:147,16,0	1/1:3,1:29:30.39:346,30,0	0/0:23,0:23:42.02:0,42,570	0/0:28,0:29:67.98:0,68,1067	0/0:24,0:24:52.92:0,53,703	0/0:11,0:11:27.09:0,27,399
chr10	40376167	.	G	GT	2732.90	PASS	AB=0.819;AC=24;AF=0.429;AN=56;BaseQRankSum=3.063;DP=726;FS=0.770;HRun=14;HaplotypeScore=103.7931;InbreedingCoeff=0.5631;MQ=71.46;MQ0=0;MQRankSum=-0.514;QD=7.35;ReadPosRankSum=-0.325;VQSLOD=2.7111;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:62,0:62:34.11:253,34,0	0/0:15,0:15:32.23:0,32,198	0/0:16,0:15:10.18:0,10,56	0/1:14,1:12:5.21:5,0,30	0/0:20,0:23:2.26:0,2,145	0/1:20,3:26:35.87:36,0,228	0/0:29,2:31:6.10:0,6,284	0/1:25,9:36:21.32:323,0,21	0/0:33,0:35:56.42:0,56,351	0/0:21,0:21:6.48:0,6,85	0/0:17,1:18:2.20:0,2,142	1/1:25,0:25:13.23:102,13,0	0/0:31,0:35:62.78:0,63,385	0/0:25,3:28:31.21:0,31,312	0/0:32,0:34:60.86:0,61,384	0/0:22,1:24:16.87:0,17,221	0/0:22,1:23:17.78:0,18,239	0/0:22,1:23:11.84:0,12,198	1/1:3,12:15:32.71:249,33,0	1/1:7,13:21:19.44:268,19,0	0/1:12,15:27:12.80:269,0,13	0/0:24,0:25:50.57:0,51,314	1/1:20,0:20:18.54:102,19,0	1/1:28,0:28:36.34:216,36,0	1/1:6,18:26:0.26:232,0,0	1/1:18,13:31:1.77:299,2,0	1/1:4,20:26:47.57:396,48,0	1/1:3,10:14:17.15:179,17,0
chr10	40376745	.	A	ACTCT	4374.71	PASS	AB=0.857;AC=47;AF=0.904;AN=52;BaseQRankSum=-2.454;DP=631;FS=4.226;HRun=0;HaplotypeScore=158.2058;InbreedingCoeff=-0.0409;MQ=69.65;MQ0=6;MQRankSum=0.007;QD=7.94;ReadPosRankSum=1.456;VQSLOD=4.1173;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:29:5.84:67,6,0	1/1:7,0:7:3.01:65,3,0	./.	0/0:42,0:25:0.26:0,0,1	./.	1/1:17,1:18:21.32:350,21,0	1/1:13,9:27:12.04:282,12,0	1/1:49,0:48:7.74:20,8,0	1/1:15,8:26:23.79:420,24,0	1/1:22,0:22:17.80:328,18,0	1/1:26,0:26:3.01:43,3,0	1/1:9,7:18:6.91:143,7,0	1/1:15,0:16:18.53:300,19,0	1/1:20,0:19:8.51:87,9,0	0/1:19,1:21:6.63:60,0,7	1/1:22,3:25:11.87:427,12,0	0/1:12,0:15:13.60:45,0,14	1/1:20,1:21:15.50:235,15,0	1/1:20,1:21:15.48:184,15,0	1/1:16,1:17:3.48:48,3,0	1/1:17,0:17:2.97:43,3,0	1/1:21,0:23:3:25,3,0	1/1:7,1:16:6.04:84,6,0	0/1:16,3:21:38.45:69,0,38	1/1:20,0:19:2.90:24,3,0	1/1:23,2:24:39.13:728,39,0	1/1:26,0:27:16.30:274,16,0	1/1:20,0:20:3.91:22,4,0
chr10	40376792	.	G	GCTCTCT	11311.50	PASS	AB=0.619;AC=33;AF=0.589;AN=56;BaseQRankSum=-3.304;DP=602;FS=6.031;HRun=0;HaplotypeScore=152.8759;InbreedingCoeff=0.8748;MQ=60.78;MQ0=15;MQRankSum=-10.060;QD=40.54;ReadPosRankSum=-2.298;VQSLOD=3.5161;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:25:35.04:0,35,1026	1/1:1,4:6:15.02:385,15,0	0/0:56,0:25:56.44:0,56,977	0/0:82,0:44:37.57:0,38,1065	1/1:2,8:10:3.13:98,3,0	0/0:15,0:15:23.07:0,23,590	0/0:25,0:25:36.12:0,36,805	1/1:10,24:35:81.26:2045,81,0	0/0:20,0:20:35.77:0,36,736	1/1:8,11:20:45.08:1043,45,0	0/1:5,7:13:0.11:1,0,0	0/0:19,0:19:29.74:0,30,630	0/0:18,0:18:36.15:0,36,896	0/0:17,0:16:33.11:0,33,823	1/1:6,13:22:36.06:933,36,0	1/1:12,16:28:40.63:1566,41,0	1/1:6,8:16:33.11:998,33,0	1/1:4,8:13:15.05:492,15,0	1/1:3,6:10:27.04:726,27,0	1/1:2,5:10:5.90:178,6,0	1/1:10,11:24:3.01:99,3,0	1/1:7,5:11:6.02:192,6,0	0/0:16,0:16:26.92:0,27,574	0/0:25,0:25:54.02:0,54,1155	1/1:6,5:13:9.03:213,9,0	1/1:6,12:19:54.14:1283,54,0	1/1:5,9:14:27.07:774,27,0	1/1:1,7:8:9.50:286,10,0
chr10	40377855	.	GGAGAGAGAGAGAGA	G	330.42	PASS	AC=8;AF=0.222;AN=36;BaseQRankSum=3.289;DP=313;FS=23.860;HRun=0;HaplotypeScore=109.4615;InbreedingCoeff=0.4680;MQ=73.42;MQ0=11;MQRankSum=0.175;QD=7.34;ReadPosRankSum=1.226;VQSLOD=0.5333;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:8,0:8:6.02:0,6,203	./.	0/0:40,0:14:0:0,0,0	./.	0/0:13,0:12:9.03:0,9,207	0/0:13,0:13:6.02:0,6,94	0/0:15,0:14:3.48:0,3,30	0/0:11,0:11:9.02:0,9,119	0/0:10,0:10:15.52:0,16,544	0/0:7,0:7:6.02:0,6,256	1/1:10,1:10:6.02:167,6,0	./.	./.	1/1:8,3:11:5.95:110,6,0	./.	1/1:9,0:8:3.01:47,3,0	./.	0/0:14,0:13:3.01:0,3,70	0/0:7,0:7:3.01:0,3,119	0/0:8,0:6:3.01:0,3,37	./.	./.	1/1:13,1:13:3.01:116,3,0	./.	0/0:16,0:16:15.05:0,15,363	0/0:7,0:7:6.49:0,6,190	0/0:7,0:7:6.96:0,7,165
chr10	40378107	.	AGG	A	1962.39	PASS	AB=0.797;AC=23;AF=0.411;AN=56;BaseQRankSum=-0.939;DP=301;FS=1.788;HRun=2;HaplotypeScore=56.1870;InbreedingCoeff=0.3888;MQ=36.62;MQ0=32;MQRankSum=-3.779;QD=14.02;ReadPosRankSum=1.095;VQSLOD=0.9580;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:10,2:11:71.66:72,0,129	1/1:4,2:4:6.01:74,6,0	0/0:38,0:4:6.12:0,6,30	0/0:44,0:8:11.02:0,11,187	0/0:11,1:11:9.37:0,9,167	0/0:5,0:5:10.28:0,10,185	0/0:9,0:9:11.87:0,12,197	1/1:9,14:18:39:664,39,0	0/0:5,0:4:11.87:0,12,153	1/1:8,3:9:16.63:217,17,0	1/1:4,0:4:2.97:23,3,0	0/0:3,0:2:1.82:0,2,5	0/0:5,0:4:5.96:0,6,44	0/0:4,0:3:8.97:0,9,73	0/0:12,0:11:21.72:0,22,297	0/0:3,1:4:8.76:0,9,93	0/0:6,1:6:13.07:0,13,159	0/1:3,3:6:26.75:97,0,27	1/1:8,4:8:3.67:281,4,0	1/1:3,6:9:14.64:147,15,0	0/1:17,1:13:62.52:63,0,68	0/1:6,2:8:35.91:36,0,168	0/0:4,0:3:9.03:0,9,183	0/0:5,0:1:6.02:0,6,121	0/1:6,4:8:57.78:128,0,58	1/1:2,6:7:18.06:290,18,0	1/1:5,1:5:1.25:3,1,0	1/1:5,2:6:3.01:48,3,0
chr10	40378108	.	GGA	G	1469.49	PASS	AB=1.000;AC=24;AF=0.429;AN=56;BaseQRankSum=0.313;DP=302;FS=0.000;HRun=0;HaplotypeScore=58.0431;InbreedingCoeff=0.3863;MQ=36.56;MQ0=33;MQRankSum=-2.749;QD=9.93;ReadPosRankSum=0.060;VQSLOD=3.1421;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:12,0:11:42.56:43,0,69	1/1:5,1:4:6.02:70,6,0	0/0:40,0:4:2.48:0,2,9	0/0:46,0:8:15.12:0,15,171	0/0:11,1:11:13.15:0,13,157	0/0:5,0:5:8.97:0,9,164	0/0:7,2:9:11.71:0,12,175	1/1:22,1:18:44.10:420,44,0	0/0:5,0:4:8.24:0,8,115	1/1:9,2:9:25.85:291,26,0	1/1:3,1:4:5.28:41,5,0	0/0:3,0:2:1.25:0,1,3	0/0:5,0:4:4.44:0,4,13	0/0:4,0:3:7.87:0,8,37	0/0:12,0:11:17.62:0,18,262	0/0:4,0:4:5.75:0,6,67	0/1:7,0:6:1.06:1,0,118	0/1:7,0:6:4.90:73,0,5	1/1:11,1:8:20.82:184,21,0	1/1:6,3:9:9.79:117,10,0	0/1:18,0:13:53.89:60,0,54	0/1:8,0:8:21.98:22,0,138	0/0:4,0:3:9.03:0,9,165	0/0:5,0:1:6.02:0,6,109	0/1:10,0:8:38.33:88,0,38	1/1:8,0:7:18.03:183,18,0	1/1:4,2:5:2.97:20,3,0	1/1:7,0:6:3.01:37,3,0
chr10	40378109	.	G	GAGGAAGA	2640.18	PASS	AB=0.899;AC=26;AF=0.464;AN=56;BaseQRankSum=-2.196;DP=306;FS=2.977;HRun=0;HaplotypeScore=76.2600;InbreedingCoeff=0.4822;MQ=36.64;MQ0=34;MQRankSum=-3.255;QD=17.60;ReadPosRankSum=-0.419;VQSLOD=2.6654;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:12,0:12:92.53:111,0,93	1/1:6,0:4:6.01:72,6,0	0/0:38,0:4:2.92:0,3,17	0/0:45,0:8:15.22:0,15,165	0/0:11,0:10:9.05:0,9,223	0/0:6,0:6:9.03:0,9,237	0/0:8,0:9:11.93:0,12,253	1/1:23,0:19:41.74:719,42,0	0/0:4,0:4:10.58:0,11,151	1/1:14,0:11:25.55:377,26,0	1/1:4,0:4:5.38:38,5,0	1/1:3,0:2:2.80:13,3,0	0/0:5,0:4:5.98:0,6,62	0/0:4,0:3:8.99:0,9,110	0/0:12,0:12:20.09:0,20,355	0/0:4,0:4:8.49:0,8,103	0/0:7,0:6:14.25:0,14,207	1/1:7,0:6:6.44:133,6,0	1/1:13,0:9:15.81:351,16,0	1/1:9,0:9:20.28:253,20,0	0/1:9,8:13:60.55:118,0,61	0/1:8,0:8:36.02:36,0,200	0/0:4,0:3:9.03:0,9,219	0/0:5,0:1:6.02:0,6,151	0/1:10,0:8:42.97:186,0,43	1/1:8,0:7:18.06:338,18,0	1/1:6,0:5:1.25:3,1,0	1/1:7,0:6:3.01:80,3,0
chr10	40378110	.	A	AG	701.10	PASS	AB=0.957;AC=24;AF=0.429;AN=56;BaseQRankSum=2.761;DP=314;FS=6.345;HRun=2;HaplotypeScore=68.2165;InbreedingCoeff=-0.0647;MQ=36.56;MQ0=35;MQRankSum=-2.648;QD=3.73;ReadPosRankSum=-1.385;VQSLOD=-0.2348;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:11,1:11:31.55:32,0,69	1/1:6,1:5:2.46:20,2,0	0/0:36,0:4:2.49:0,2,9	0/0:42,0:8:5.05:0,5,138	0/0:11,1:11:9.71:0,10,119	0/0:6,0:6:11.96:0,12,141	0/1:9,0:9:14.84:15,0,105	0/1:24,1:20:54.70:125,0,55	0/1:5,0:4:15.80:16,0,69	1/1:14,3:15:21.57:246,22,0	1/1:2,1:3:2.73:43,3,0	1/1:1,1:2:3.01:40,3,0	0/0:6,0:5:5.99:0,6,51	0/0:4,0:3:8.98:0,9,78	0/1:14,0:13:8.07:8,0,178	0/0:3,0:3:5.81:0,6,52	0/1:6,1:6:11.15:11,0,101	0/1:7,0:6:10.72:26,0,11	0/1:13,1:9:4.91:57,0,5	1/1:10,0:10:4.18:42,4,0	0/1:19,0:13:5.17:5,0,35	0/1:8,0:8:23.05:23,0,106	0/0:4,0:3:9.03:0,9,117	0/0:6,0:2:6.02:0,6,77	0/1:8,3:9:28.15:88,0,28	0/1:9,0:8:19.78:20,0,23	1/1:7,0:6:3.01:41,3,0	0/0:4,3:6:0.47:0,0,1
chr10	40378116	.	GGAA	G	238.79	PASS	AB=0.993;AC=12;AF=0.222;AN=54;BaseQRankSum=1.735;DP=312;FS=1.122;HRun=0;HaplotypeScore=73.3054;InbreedingCoeff=0.1284;MQ=31.25;MQ0=37;MQRankSum=-1.547;QD=2.91;ReadPosRankSum=-3.755;VQSLOD=0.0723;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:11:12.06:0,12,88	0/1:8,0:6:9.21:9,0,41	./.	0/0:33,0:6:10.27:0,10,41	0/1:13,0:12:1.20:1,0,65	0/0:7,0:7:7.01:0,7,223	0/0:9,0:9:10.90:0,11,63	0/0:25,0:21:53.22:0,53,378	0/0:4,0:3:8.56:0,9,54	0/1:22,1:20:61.43:61,0,149	1/1:4,0:4:2.46:30,2,0	0/0:3,0:2:2.99:0,3,24	1/1:1,5:5:6.02:100,6,0	1/1:2,3:3:8.96:114,9,0	0/0:14,0:13:2.01:0,2,122	0/0:3,0:3:1.94:0,2,23	0/0:8,0:7:9.70:0,10,64	0/1:8,0:7:11.99:45,0,12	0/0:13,0:8:22.89:0,23,142	0/0:11,0:11:6.13:0,6,62	0/0:20,0:13:9.35:0,9,59	0/1:9,0:8:2.95:3,0,54	0/0:4,0:3:9.02:0,9,123	0/1:6,0:3:7.90:8,0,16	0/0:11,0:9:4.70:0,5,97	0/0:11,0:10:3.09:0,3,111	0/0:5,0:5:1.59:0,2,15	0/0:8,0:6:2.68:0,3,11
chr10	40378131	.	G	GGAAGAA	1779.60	PASS	AB=0.977;AC=19;AF=0.352;AN=54;BaseQRankSum=0.328;DP=357;FS=5.094;HRun=0;HaplotypeScore=107.4836;InbreedingCoeff=-0.0993;MQ=31.97;MQ0=36;MQRankSum=-1.756;QD=7.45;ReadPosRankSum=-2.064;VQSLOD=1.7550;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:12:13.72:0,14,143	1/1:10,0:8:11.64:160,12,0	./.	0/1:20,0:2:1.68:7,0,2	0/1:18,0:16:22.41:22,0,105	0/0:14,0:14:27.63:0,28,383	0/0:11,0:9:12.91:0,13,144	0/1:34,0:30:31.51:32,0,414	0/0:6,0:5:1.92:0,2,55	0/1:18,8:24:99:681,0,150	1/1:4,1:5:7.73:121,8,0	0/0:6,0:5:11.53:0,12,158	0/1:7,0:6:15.24:15,0,29	0/0:4,0:3:5.98:0,6,55	0/1:16,0:15:60.32:60,0,201	0/0:6,0:6:9.61:0,10,65	0/1:10,0:9:33.63:34,0,69	0/1:9,0:8:13.85:201,0,14	0/0:14,0:10:17.16:0,17,262	0/1:9,0:9:1.26:1,0,65	0/1:19,0:12:24.69:25,0,121	0/1:16,0:15:13.78:14,0,174	0/0:5,0:5:12.14:0,12,153	0/0:11,0:7:0.53:0,1,102	0/1:14,0:12:79.77:80,0,116	0/1:11,0:11:99:123,0,175	1/1:13,0:13:10.46:362,10,0	0/0:8,0:6:6.02:0,6,78
chr10	40378193	.	G	GGAGAGGGT	1182.65	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=0.808;DP=413;FS=9.453;HRun=0;HaplotypeScore=122.8867;InbreedingCoeff=0.8758;MQ=86.11;MQ0=0;MQRankSum=-4.456;QD=65.70;ReadPosRankSum=-1.969;VQSLOD=2.8461;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,8:18:33.11:1277,33,0	0/0:13,0:13:39.13:0,39,1057	0/0:23,0:23:56.56:0,57,1379	0/0:23,0:23:33.25:0,33,832	0/0:16,0:16:42.14:0,42,1021	0/0:24,0:24:69.24:0,69,1806	0/0:15,0:15:39.12:0,39,1000	0/0:28,0:27:69.18:0,69,1700	0/0:10,0:10:30.09:0,30,737	0/0:16,0:16:32.95:0,33,821	0/0:5,0:5:12.04:0,12,293	0/0:9,0:9:24.08:0,24,651	0/0:10,0:10:21.07:0,21,562	0/0:6,0:6:12.04:0,12,325	0/0:16,0:16:39.12:0,39,979	0/0:13,0:13:33.06:0,33,832	0/0:22,0:22:60.21:0,60,1575	0/0:10,0:10:27.09:0,27,732	0/0:14,0:14:20.76:0,21,540	0/0:8,0:8:24.08:0,24,651	0/0:28,0:28:66.23:0,66,1696	0/0:13,0:13:33.11:0,33,895	0/0:3,0:3:9.03:0,9,244	0/0:12,0:12:36.12:0,36,976	0/0:10,0:10:24.05:0,24,523	0/0:15,0:15:42.13:0,42,995	0/0:25,0:24:72.25:0,72,1926	0/0:7,0:7:21.07:0,21,570
chr10	40379721	.	AC	A	2918.80	PASS	AB=0.800;AC=22;AF=0.393;AN=56;BaseQRankSum=5.126;DP=437;FS=14.103;HRun=10;HaplotypeScore=85.8234;InbreedingCoeff=0.7643;MQ=82.46;MQ0=5;MQRankSum=-1.552;QD=13.03;ReadPosRankSum=5.089;VQSLOD=1.9799;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:11,30:43:75.38:599,75,0	0/0:4,0:4:7.99:0,8,48	0/0:38,1:22:11.79:0,12,251	0/0:30,0:16:3.77:0,4,97	1/1:4,11:15:25.96:202,26,0	0/0:6,0:6:15.01:0,15,147	0/0:22,0:22:44.96:0,45,447	0/0:18,0:17:14.91:0,15,115	0/0:14,0:14:26.92:0,27,252	0/0:7,0:7:8.91:0,9,62	0/0:7,0:7:14.94:0,15,118	1/1:4,12:17:26.03:214,26,0	1/1:6,10:18:42.05:292,42,0	1/1:2,14:17:35.16:287,35,0	1/1:5,9:14:26.86:221,27,0	1/1:2,14:17:32:260,32,0	1/1:4,21:25:64.52:541,65,0	0/0:18,0:17:30.06:0,30,207	0/0:10,0:10:17.97:0,18,156	0/0:7,0:7:4.54:0,5,43	0/0:11,0:11:5.96:0,6,43	1/1:3,2:5:10.07:63,10,0	1/1:4,13:17:14.74:161,15,0	0/1:9,18:27:45.18:286,0,45	0/0:5,0:5:8.87:0,9,61	0/1:8,0:8:2.12:2,0,55	0/0:10,0:10:14.94:0,15,124	0/0:5,0:5:8.93:0,9,64
chr10	40379730	.	C	CCT	1542.43	PASS	AB=1.000;AC=34;AF=0.607;AN=56;BaseQRankSum=5.466;DP=417;FS=12.966;HRun=0;HaplotypeScore=103.6847;InbreedingCoeff=0.4579;MQ=81.00;MQ0=5;MQRankSum=-2.428;QD=6.00;ReadPosRankSum=3.611;VQSLOD=2.3194;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:36,0:36:17.12:237,17,0	0/1:4,0:4:17.25:17,0,29	0/0:40,0:21:43.52:0,44,354	0/0:27,0:14:31.48:0,31,237	1/1:16,0:16:30.63:150,31,0	0/0:6,0:6:14.58:0,15,152	0/0:16,0:16:41.78:0,42,476	1/1:11,0:10:17.38:125,17,0	0/0:14,0:14:22.34:0,22,337	1/1:6,0:6:8.55:58,9,0	0/1:7,0:7:22.08:22,0,48	0/0:13,0:13:26.77:0,27,187	0/1:19,0:18:28.30:81,0,28	1/1:19,0:19:19.93:136,20,0	1/1:11,0:11:22.68:102,23,0	1/1:20,0:20:14.53:128,15,0	1/1:29,0:29:44.15:242,44,0	1/1:21,0:20:15.03:132,15,0	0/1:7,0:7:20.68:21,0,80	1/1:6,0:6:11.76:72,12,0	1/1:2,5:7:2.97:20,3,0	1/1:2,0:2:3.74:12,4,0	0/0:16,0:16:26.59:0,27,209	0/0:27,0:27:55.87:0,56,417	0/1:8,0:8:18.64:36,0,19	1/1:12,0:13:4.10:81,4,0	0/1:10,0:10:20.38:30,0,20	1/1:5,0:5:5.93:40,6,0
chr10	40379731	.	C	CTT	6124.47	PASS	AB=1.000;AC=41;AF=0.732;AN=56;BaseQRankSum=1.257;DP=424;FS=1.119;HRun=8;HaplotypeScore=89.2810;InbreedingCoeff=0.7981;MQ=78.90;MQ0=6;MQRankSum=-2.654;QD=22.60;ReadPosRankSum=-0.589;VQSLOD=3.8594;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:36,0:36:79.67:988,80,0	1/1:3,1:4:3.01:47,3,0	0/0:39,0:20:15:0,15,134	0/0:27,0:13:14.71:0,15,105	1/1:18,0:18:40.85:442,41,0	0/1:6,0:6:0.14:0,0,89	0/0:14,0:15:16.81:0,17,274	1/1:1,7:8:21.05:306,21,0	0/0:16,0:16:7:0,7,267	1/1:1,4:5:8.72:138,9,0	1/1:4,1:8:8.39:92,8,0	0/0:13,0:13:26.86:0,27,204	1/1:19,0:18:44.52:465,45,0	1/1:19,0:19:42.07:498,42,0	1/1:11,0:11:30.07:360,30,0	1/1:21,0:21:39.13:512,39,0	1/1:28,0:29:81.04:942,81,0	1/1:3,14:21:23.44:325,23,0	1/1:9,0:8:11.97:114,12,0	1/1:2,1:7:12.92:163,13,0	1/1:7,1:8:6.02:86,6,0	1/1:2,0:2:6:60,6,0	0/0:15,0:15:23.34:0,23,198	0/0:28,0:28:50.85:0,51,436	1/1:3,0:9:8.99:103,9,0	1/1:4,8:14:31.65:301,32,0	1/1:5,4:11:6.02:87,6,0	1/1:2,3:5:6.02:94,6,0
chr10	40380129	.	TTTCCTTTTAATG	T	13592.56	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=17.205;DP=737;FS=1.961;HRun=0;HaplotypeScore=269.4926;InbreedingCoeff=1.0000;MQ=66.38;MQ0=0;MQRankSum=-17.919;QD=66.63;ReadPosRankSum=-0.810;VQSLOD=4.1901;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,23:31:57.01:1680,57,0	0/0:14,0:14:42.14:0,42,2435	0/0:30,0:27:78.24:0,78,3192	0/0:22,0:20:60.21:0,60,3215	1/1:0,33:33:53.23:1098,53,0	0/0:28,0:28:84.29:0,84,4932	0/0:22,0:22:66.23:0,66,3569	0/0:30,0:30:81.28:0,81,4732	0/0:27,0:27:78.27:0,78,4496	0/0:28,0:28:84.27:0,84,4947	0/0:20,0:20:60.21:0,60,3376	0/0:27,0:27:81.28:0,81,4772	1/1:2,15:17:45.15:1721,45,0	1/1:2,19:21:54.10:1793,54,0	1/1:2,29:31:78.09:2591,78,0	1/1:5,19:24:51.12:1949,51,0	1/1:5,25:30:51.17:1948,51,0	0/0:29,0:29:87.30:0,87,5063	0/0:23,0:23:66.23:0,66,3680	0/0:27,0:27:81.28:0,81,4830	0/0:43,0:43:99:0,129,7842	1/1:0,17:16:41.88:813,42,0	0/0:23,0:23:62.88:0,63,3633	0/0:26,0:26:78.25:0,78,4515	0/0:21,0:21:63.22:0,63,3739	0/0:36,0:36:99:0,108,6680	0/0:34,0:33:96.33:0,96,5334	0/0:23,0:23:69.24:0,69,3883
chr10	40380460	.	A	AT	13948.85	PASS	AB=0.818;AC=35;AF=0.625;AN=56;BaseQRankSum=-0.216;DP=659;FS=8.661;HRun=5;HaplotypeScore=77.1209;InbreedingCoeff=0.9226;MQ=58.02;MQ0=1;MQRankSum=-2.430;QD=32.90;ReadPosRankSum=0.469;VQSLOD=5.0403;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,114,1225	1/1:0,12:12:36.12:474,36,0	0/0:9,0:7:17.96:0,18,177	0/1:6,1:4:18.31:29,0,18	1/1:4,34:38:84.27:1105,84,0	0/0:22,0:22:63.14:0,63,667	0/0:23,0:23:63.12:0,63,659	1/1:3,23:23:60.15:755,60,0	0/0:24,0:24:63.16:0,63,677	1/1:3,31:34:90.25:1163,90,0	1/1:1,25:26:66.21:868,66,0	0/0:24,0:24:69.17:0,69,741	0/0:24,0:24:66.14:0,66,698	0/0:18,0:18:45.09:0,45,473	1/1:1,21:22:51.17:671,51,0	1/1:1,16:17:42.14:553,42,0	1/1:5,21:26:66.17:848,66,0	1/1:2,16:18:35.63:508,36,0	1/1:2,29:31:87.23:1101,87,0	1/1:2,24:26:75.24:984,75,0	1/1:1,15:16:39.13:512,39,0	1/1:0,21:21:54.18:710,54,0	0/0:23,0:23:66.13:0,66,689	0/0:26,0:26:69.17:0,69,741	1/1:2,25:27:72.23:948,72,0	1/1:2,39:41:99:1519,117,0	1/1:1,26:26:75.22:964,75,0	1/1:1,6:7:18.06:237,18,0
chr10	40380604	.	GGTTT	G	12044.75	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=18.548;DP=537;FS=1.932;HRun=0;HaplotypeScore=154.3673;InbreedingCoeff=0.9782;MQ=75.09;MQ0=0;MQRankSum=-17.371;QD=46.69;ReadPosRankSum=2.272;VQSLOD=5.0937;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:90.31:0,90,2574	1/1:0,8:8:18.06:375,18,0	0/0:15,0:15:41.32:0,41,1089	0/0:15,0:15:39.60:0,40,1059	1/1:0,13:13:15.05:312,15,0	0/0:18,0:18:54.19:0,54,1553	0/0:43,0:43:99:0,129,3623	1/1:0,23:21:62.65:1101,63,0	0/0:24,0:24:64.08:0,64,1963	1/1:0,25:26:78.27:1590,78,0	1/1:1,5:7:5.93:79,6,0	0/0:39,0:39:99:0,114,3300	0/0:25,0:25:75.26:0,75,2168	0/0:28,0:28:84.29:0,84,2425	1/1:0,19:19:48.16:946,48,0	1/1:0,18:18:51.07:989,51,0	1/1:0,11:11:24.08:491,24,0	1/1:0,12:12:33.11:689,33,0	1/1:0,11:11:33.10:651,33,0	1/1:0,15:15:30.06:583,30,0	1/1:0,18:18:29.85:503,30,0	1/1:0,13:14:23.97:454,24,0	0/0:9,0:9:27.09:0,27,782	0/0:33,0:33:99:0,99,2855	1/1:0,21:21:44.83:745,45,0	1/1:1,13:14:41.92:788,42,0	1/1:0,23:23:69.24:1436,69,0	1/1:0,5:5:15.05:313,15,0
chr10	40382124	.	GAACCGT	G	12560.47	PASS	AB=0.631;AC=34;AF=0.630;AN=54;BaseQRankSum=13.250;DP=622;FS=1.247;HRun=0;HaplotypeScore=140.6188;InbreedingCoeff=0.8024;MQ=78.34;MQ0=0;MQRankSum=-14.325;QD=31.24;ReadPosRankSum=3.210;VQSLOD=4.3747;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,36:44:66.18:1364,66,0	1/1:3,6:8:15.05:319,15,0	0/0:24,0:24:54.19:0,54,1692	0/0:24,0:24:42.13:0,42,1237	0/0:5,10:15:1.11:0,1,3	0/0:16,0:16:30.09:0,30,848	0/0:38,0:38:99:0,102,3152	1/1:8,16:24:45.13:872,45,0	0/0:18,0:18:45.15:0,45,1491	1/1:4,12:15:33.09:612,33,0	./.	0/0:27,0:27:72.22:0,72,2297	1/1:4,23:27:61.39:1301,61,0	1/1:3,26:29:60.05:1241,60,0	1/1:4,21:25:48.16:1020,48,0	1/1:6,17:23:39.13:842,39,0	1/1:8,17:25:24.08:524,24,0	0/1:11,13:24:76.80:428,0,77	1/1:5,10:15:30.09:598,30,0	1/1:4,9:13:24.08:523,24,0	0/1:17,29:46:2.69:133,0,3	1/1:8,10:18:12.04:235,12,0	0/0:12,0:12:33.11:0,33,961	0/0:38,0:38:99:0,105,3428	1/1:4,10:14:15.05:327,15,0	1/1:3,18:21:54.15:1044,54,0	1/1:4,19:23:51.18:1112,51,0	1/1:1,4:5:3.01:65,3,0
chr10	40383175	.	A	AG	335.65	PASS	AB=0.905;AC=3;AF=0.056;AN=54;BaseQRankSum=0.139;DP=421;FS=1.059;HRun=2;HaplotypeScore=54.4385;InbreedingCoeff=0.0728;MQ=48.54;MQ0=48;MQRankSum=-0.628;QD=8.83;ReadPosRankSum=0.339;VQSLOD=1.0874;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:18:40.31:0,40,442	0/0:3,0:3:9.03:0,9,111	0/1:12,0:1:0:0,0,0	0/0:15,0:2:3.01:0,3,37	0/0:7,0:6:11.77:0,12,123	0/0:4,0:4:12.04:0,12,149	0/0:29,0:29:81.23:0,81,982	0/0:9,0:7:15.05:0,15,186	0/0:9,0:9:24.08:0,24,296	0/0:9,0:7:17.53:0,18,173	./.	0/0:24,0:24:59.76:0,60,705	0/1:6,0:6:62.97:72,0,63	0/1:12,8:20:99:351,0,138	0/0:13,0:13:39.12:0,39,483	0/0:19,0:19:54.17:0,54,669	0/0:29,1:29:70.96:0,71,814	0/0:26,0:26:66.16:0,66,799	0/0:16,0:9:23.01:0,23,191	0/0:2,0:2:6.02:0,6,74	0/0:68,0:37:72.23:0,72,897	0/0:5,0:3:6.02:0,6,74	0/0:4,0:3:6.02:0,6,74	0/0:37,0:36:98.98:0,99,1184	0/0:10,0:9:20.28:0,20,210	0/0:10,0:9:26.81:0,27,298	0/0:7,0:7:15.03:0,15,173	0/0:4,0:4:6.02:0,6,74
chr10	40383181	.	AG	A	833.31	PASS	AB=0.751;AC=11;AF=0.212;AN=52;BaseQRankSum=8.802;DP=402;FS=2.162;HRun=3;HaplotypeScore=48.5834;InbreedingCoeff=-0.1257;MQ=48.58;MQ0=46;MQRankSum=-1.912;QD=4.82;ReadPosRankSum=-1.845;VQSLOD=-0.2135;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:17,5:17:97.81:98,0,208	0/0:2,0:2:6.02:0,6,86	./.	0/0:12,0:1:3.01:0,3,38	0/0:7,0:6:15.05:0,15,216	0/0:3,0:3:3.01:0,3,43	0/0:29,0:29:76.48:0,76,1098	0/0:8,0:8:15.05:0,15,214	0/0:8,0:8:21.07:0,21,293	0/1:5,4:7:41.99:117,0,42	./.	0/0:22,0:22:56.83:0,57,794	1/1:1,3:4:9.03:112,9,0	0/1:11,6:17:99:182,0,245	0/0:16,0:16:39.13:0,39,560	0/0:18,0:18:51.12:0,51,693	0/0:25,0:24:56.13:0,56,807	0/1:16,11:27:99:223,0,505	0/0:15,0:9:20.75:0,21,226	0/0:2,0:2:3.01:0,3,43	0/1:65,4:44:80.32:80,0,861	0/0:7,0:5:12.04:0,12,173	0/0:4,0:3:6.02:0,6,81	0/0:34,0:33:77.91:0,78,1098	0/1:5,2:7:35.18:42,0,35	0/1:7,3:9:67.70:68,0,207	0/1:3,2:5:25.16:25,0,117	0/1:1,2:3:31.17:31,0,37
chr10	40383242	.	GGCAGA	G	1120.31	PASS	AB=0.715;AC=8;AF=0.148;AN=54;BaseQRankSum=6.597;DP=444;FS=0.000;HRun=0;HaplotypeScore=77.7871;InbreedingCoeff=-0.0525;MQ=48.37;MQ0=43;MQRankSum=-5.652;QD=10.98;ReadPosRankSum=3.011;VQSLOD=1.3902;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:11,7:14:49.88:50,0,67	0/0:1,0:1:3.01:0,3,95	0/0:9,0:1:3.01:0,3,30	0/0:11,0:1:3:0,3,28	./.	0/0:13,0:12:36.11:0,36,520	0/0:37,0:36:97.98:0,98,2021	0/0:5,0:4:12.03:0,12,133	0/0:19,0:18:54.16:0,54,1242	0/0:7,0:6:18.05:0,18,208	0/0:5,0:4:6.02:0,6,74	0/0:24,0:23:65.96:0,66,1454	0/1:4,4:8:99:243,0,120	0/1:14,9:19:99:340,0,311	0/1:9,4:12:99:231,0,238	0/1:9,6:13:85.79:86,0,190	0/1:14,10:21:99:288,0,355	0/0:31,0:30:84.21:0,84,1667	0/0:12,0:7:15.04:0,15,274	0/0:1,0:1:0.47:0,0,1	0/0:84,0:63:99:0,135,2512	0/0:4,2:5:3.48:0,3,38	0/0:9,0:4:3.01:0,3,33	0/0:36,0:35:99:0,99,2421	0/0:6,0:6:13.75:0,14,147	0/0:12,0:10:30.08:0,30,341	0/0:11,0:10:30.10:0,30,762	1/1:1,0:1:1.25:3,1,0
chr10	40385403	.	A	AAAATAAAT	3689.53	PASS	AC=26;AF=0.684;AN=38;BaseQRankSum=-3.122;DP=251;FS=1.484;HRun=0;HaplotypeScore=65.5788;InbreedingCoeff=0.6048;MQ=50.35;MQ0=5;MQRankSum=-1.866;QD=21.70;ReadPosRankSum=-1.382;VQSLOD=2.3084;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:12.66:0,13,159	./.	./.	./.	./.	0/0:4,0:4:3.01:0,3,52	./.	1/1:40,0:39:24.01:350,24,0	0/0:6,0:6:9.03:0,9,200	0/0:5,0:5:3.01:0,3,74	1/1:6,2:8:3.01:122,3,0	1/1:7,1:8:3.01:122,3,0	0/0:3,0:3:3.01:0,3,56	0/0:4,0:4:5.38:0,5,62	1/1:1,1:2:3.01:122,3,0	1/1:2,4:6:9.03:366,9,0	1/1:19,8:26:16.30:598,16,0	1/1:19,8:30:15.05:562,15,0	1/1:6,0:8:12.03:232,12,0	./.	./.	./.	./.	1/1:3,0:4:2.99:24,3,0	1/1:5,4:10:9.03:365,9,0	1/1:5,0:6:12.03:261,12,0	1/1:6,0:6:6.02:108,6,0	1/1:9,0:15:24.08:459,24,0
chr10	40385434	.	ATAAATAAAT	A	367.70	PASS	AB=1.000;AC=3;AF=0.058;AN=52;BaseQRankSum=4.653;DP=253;FS=0.000;HRun=0;HaplotypeScore=80.1724;InbreedingCoeff=0.3548;MQ=50.43;MQ0=3;MQRankSum=0.457;QD=14.71;ReadPosRankSum=-1.722;VQSLOD=1.8673;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:13,6:19:24.47:433,24,0	0/0:3,0:3:9.02:0,9,190	0/0:4,0:4:12.04:0,12,166	0/0:2,0:2:3.01:0,3,40	0/0:6,0:6:18.06:0,18,350	0/0:3,0:3:9.03:0,9,306	0/0:3,0:3:9.03:0,9,121	0/0:46,0:45:99:0,133,2561	0/0:6,0:6:18.06:0,18,642	0/0:6,0:6:18.06:0,18,441	0/0:6,0:6:15.05:0,15,371	0/0:5,0:5:6.02:0,6,169	0/0:4,0:4:2.74:0,3,40	0/1:6,0:6:11.74:38,0,12	0/0:3,0:3:9.03:0,9,215	0/0:6,0:6:15.05:0,15,469	0/0:33,0:32:75.87:0,76,1753	0/0:31,0:31:69.06:0,69,1485	0/0:12,0:11:33.08:0,33,798	0/0:5,0:5:15.04:0,15,296	./.	./.	0/0:1,0:1:3.01:0,3,40	0/0:3,0:3:9.03:0,9,211	0/0:12,0:12:30.10:0,30,667	0/0:6,0:6:18.06:0,18,613	0/0:5,0:5:15.05:0,15,439	0/0:16,0:16:48.11:0,48,1761
chr10	40385444	.	A	AG	240.21	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=5.362;DP=308;FS=6.583;HRun=0;HaplotypeScore=48.7437;InbreedingCoeff=0.8072;MQ=54.57;MQ0=2;MQRankSum=1.449;QD=6.49;ReadPosRankSum=-1.036;VQSLOD=2.2388;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:15,6:21:19.63:129,20,0	0/0:2,0:2:6.02:0,6,84	0/0:6,0:6:18.06:0,18,252	0/0:7,0:6:15.05:0,15,209	0/0:12,0:12:36.12:0,36,502	0/0:4,0:4:12.04:0,12,167	0/0:4,0:4:12.04:0,12,168	0/0:42,0:42:99:0,121,1596	0/0:9,0:9:24.08:0,24,334	0/0:8,0:8:24.08:0,24,335	0/0:7,0:7:17.97:0,18,227	0/0:6,0:6:5.85:0,6,56	1/1:7,1:8:12.94:123,13,0	1/1:7,1:8:15.69:124,16,0	0/0:5,0:5:11.96:0,12,127	0/0:7,0:7:17.88:0,18,181	0/0:33,0:32:72.23:0,72,787	0/0:30,0:30:68.88:0,69,765	0/0:21,0:20:57.14:0,57,729	0/0:6,0:6:12:0,12,146	0/0:5,0:5:12.04:0,12,167	0/0:4,0:4:12.04:0,12,168	0/0:2,0:2:6.02:0,6,84	0/0:5,0:5:15.02:0,15,174	0/0:14,0:14:35.90:0,36,430	0/0:6,0:6:17.97:0,18,207	0/0:9,0:9:24.06:0,24,315	0/0:17,0:17:51.09:0,51,669
chr10	40386986	.	AC	A	2311.49	PASS	AB=0.935;AC=41;AF=0.732;AN=56;BaseQRankSum=4.145;DP=488;FS=1.259;HRun=11;HaplotypeScore=73.5989;InbreedingCoeff=0.6016;MQ=70.78;MQ0=13;MQRankSum=0.587;QD=6.39;ReadPosRankSum=4.060;VQSLOD=1.8316;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:23:25.24:137,25,0	1/1:6,0:6:13.75:77,14,0	0/0:62,0:26:20.68:0,21,148	0/1:55,2:18:26.67:30,0,27	1/1:11,0:11:21.61:107,22,0	0/1:10,1:11:4.19:4,0,85	0/0:13,1:14:1.34:0,1,145	1/1:21,1:20:11.84:126,12,0	0/0:4,0:4:5.99:0,6,49	1/1:13,4:16:27.91:177,28,0	1/1:3,3:7:10.85:63,11,0	0/0:11,0:11:19.92:0,20,133	1/1:12,0:12:8.01:24,8,0	1/1:21,0:21:24.58:73,25,0	1/1:21,0:20:27.02:133,27,0	1/1:9,0:9:20.21:112,20,0	1/1:32,0:32:31.29:172,31,0	1/1:22,9:34:55.93:504,56,0	1/1:5,5:9:14.86:107,15,0	1/1:0,3:3:5.92:42,6,0	0/1:11,1:12:7.14:73,0,7	1/1:10,0:10:15.63:75,16,0	0/0:6,1:7:3.76:0,4,17	0/0:28,0:28:45.94:0,46,451	1/1:2,4:6:5.99:49,6,0	1/1:9,6:14:21.55:154,22,0	1/1:4,6:11:11.96:95,12,0	1/1:10,2:12:17.02:155,17,0
chr10	40386995	.	CCCA	C	1952.90	PASS	AB=0.944;AC=20;AF=0.357;AN=56;BaseQRankSum=7.134;DP=529;FS=16.433;HRun=0;HaplotypeScore=89.0207;InbreedingCoeff=0.4410;MQ=67.61;MQ0=13;MQRankSum=-0.079;QD=5.44;ReadPosRankSum=8.651;VQSLOD=-0.1416;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:24:4.36:83,0,4	0/1:6,0:6:3.02:90,0,3	0/1:69,0:24:14.72:15,0,217	0/1:64,0:19:10.11:10,0,117	1/1:11,0:13:25.56:215,26,0	0/0:9,0:9:27.03:0,27,297	0/0:15,0:15:45.05:0,45,624	0/0:26,0:24:33.87:0,34,340	0/0:4,0:4:12.01:0,12,141	0/1:24,0:23:95.44:119,0,95	0/1:8,0:8:18.19:18,0,34	0/0:12,0:12:32.98:0,33,387	0/1:2,9:11:2.25:177,0,2	1/1:8,11:19:22.47:501,22,0	1/1:24,0:25:29.93:259,30,0	1/1:10,0:10:20.95:175,21,0	1/1:36,0:37:28.93:248,29,0	0/1:38,0:38:93.66:94,0,169	0/0:9,0:8:17.47:0,17,162	0/0:7,0:7:15.28:0,15,108	0/0:11,0:11:24.42:0,24,215	1/1:9,0:10:17.34:141,17,0	0/0:3,0:3:6.02:0,6,96	0/0:27,0:27:78.13:0,78,1158	0/0:7,0:7:9:0,9,84	0/0:18,0:17:38.01:0,38,329	0/0:9,0:9:17.99:0,18,170	0/0:13,0:13:22.91:0,23,208
chr10	40386996	.	CCAA	C	2143.75	PASS	AB=0.890;AC=17;AF=0.304;AN=56;BaseQRankSum=2.626;DP=568;FS=51.812;HRun=0;HaplotypeScore=93.3493;InbreedingCoeff=0.3568;MQ=68.36;MQ0=13;MQRankSum=-0.490;QD=8.03;ReadPosRankSum=6.574;VQSLOD=0.4637;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:7,0:24:39.35:140,0,39	0/1:6,0:6:13.39:13,0,55	0/0:70,1:26:23.39:0,23,226	0/1:62,0:19:27.60:28,0,146	1/1:2,11:13:26.94:343,27,0	0/0:10,0:10:29.50:0,29,265	0/0:17,0:17:51.11:0,51,750	0/1:27,0:25:33.10:33,0,528	0/0:10,0:10:24.06:0,24,341	0/0:25,0:24:38.02:0,38,508	0/0:9,0:9:5.63:0,6,153	0/0:17,0:17:50.98:0,51,682	0/1:10,0:11:17.09:82,0,17	0/1:13,0:19:25.29:239,0,25	1/1:6,19:24:29.87:388,30,0	1/1:3,7:10:20.97:336,21,0	1/1:6,31:37:33.06:481,33,0	0/0:38,0:38:97.63:0,98,896	0/0:9,0:9:7.18:0,7,217	0/0:8,0:8:17.15:0,17,186	0/0:10,0:10:5.59:0,6,238	1/1:1,8:10:17.40:218,17,0	0/0:4,0:4:9.03:0,9,144	0/0:31,0:31:87.11:0,87,1326	0/0:10,0:10:11.97:0,12,125	0/1:21,0:20:28.61:29,0,524	0/0:16,0:16:35.96:0,36,394	0/0:15,0:15:12.14:0,12,260
chr10	40388098	.	A	AT	7703.93	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-14.190;DP=672;FS=3.002;HRun=8;HaplotypeScore=62.5856;InbreedingCoeff=0.9849;MQ=82.44;MQ0=0;MQRankSum=-0.519;QD=29.07;ReadPosRankSum=-1.651;VQSLOD=4.7121;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,135,1218	1/1:2,10:12:33.10:381,33,0	0/0:24,0:23:46.38:0,46,434	0/0:19,0:19:5.89:0,6,346	0/0:14,0:14:41.96:0,42,368	0/0:18,0:18:51.02:0,51,467	0/0:26,0:26:72.03:0,72,659	1/1:4,23:28:72.02:790,72,0	0/0:23,0:23:60.02:0,60,549	1/1:2,19:21:57.15:646,57,0	1/1:4,18:22:54.15:615,54,0	0/0:31,0:31:81.03:0,81,739	0/0:28,0:28:78.02:0,78,709	0/0:27,0:27:72.02:0,72,654	0/0:26,0:26:66.02:0,66,604	0/0:16,0:16:39.01:0,39,357	0/0:41,0:41:99:0,114,1043	1/1:3,29:32:75.22:866,75,0	1/1:4,19:24:62.98:677,63,0	1/1:2,21:24:62.99:693,63,0	1/1:1,25:26:66.20:762,66,0	0/0:15,0:15:44.98:0,45,403	0/0:20,0:20:54.01:0,54,490	0/0:32,0:32:87.03:0,87,792	1/1:4,12:16:33.10:381,33,0	1/1:1,28:29:84.22:948,84,0	1/1:1,19:21:54.16:619,54,0	1/1:0,9:10:29.92:326,30,0
chr10	40388688	.	CTGTT	C	5442.25	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=13.046;DP=684;FS=9.289;HRun=0;HaplotypeScore=116.1685;InbreedingCoeff=0.9986;MQ=85.12;MQ0=0;MQRankSum=-4.215;QD=44.61;ReadPosRankSum=3.459;VQSLOD=5.1863;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,138,3776	0/0:10,0:10:30.10:0,30,813	0/0:25,0:26:68.97:0,69,1802	0/0:21,0:21:60.21:0,60,1579	1/1:0,15:15:20.30:406,20,0	0/0:25,0:25:75.24:0,75,1993	0/0:26,0:26:75.26:0,75,2018	0/0:29,0:29:84.28:0,84,2221	0/0:26,0:26:75.26:0,75,2048	0/0:35,0:35:99:0,102,2759	0/0:19,0:19:57.20:0,57,1526	0/0:29,0:29:87.30:0,87,2302	0/0:23,0:23:69.24:0,69,1863	0/0:28,0:28:84.29:0,84,2266	1/1:2,30:32:78.17:1511,78,0	1/1:1,24:25:63.22:1220,63,0	1/1:1,33:34:81.28:1551,81,0	0/0:35,0:35:99:0,102,2788	0/0:16,0:16:48.16:0,48,1264	0/0:14,0:14:36.11:0,36,928	0/0:30,0:30:87.30:0,87,2384	1/1:0,16:16:39.13:755,39,0	0/0:12,0:12:36.12:0,36,974	0/0:28,0:28:84.29:0,84,2302	0/0:13,0:13:36.12:0,36,985	0/0:31,0:31:84.29:0,84,2267	0/0:24,0:24:66.20:0,66,1640	0/0:15,0:15:45.15:0,45,1232
chr10	40392458	.	TAACACGGTCCTTA	T	11345.58	PASS	AB=0.537;AC=11;AF=0.196;AN=56;BaseQRankSum=14.798;DP=614;FS=15.182;HRun=0;HaplotypeScore=234.3515;InbreedingCoeff=0.8859;MQ=75.85;MQ0=0;MQRankSum=-15.153;QD=83.42;ReadPosRankSum=1.111;VQSLOD=3.1029;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,27:29:63.22:2343,63,0	0/0:7,0:7:21.07:0,21,1393	0/0:16,0:16:48.16:0,48,2187	0/0:16,0:16:39.13:0,39,1662	1/1:4,12:16:32.23:1026,32,0	0/0:25,0:25:75.26:0,75,4591	0/0:25,0:25:72.25:0,72,4559	0/0:25,0:25:72.24:0,72,3509	0/0:33,0:33:93.32:0,93,5678	0/0:28,0:28:84.27:0,84,5042	0/0:14,0:14:42.14:0,42,2337	0/0:26,0:26:78.27:0,78,5049	0/0:19,0:19:54.17:0,54,3340	0/0:30,0:30:87.30:0,87,4957	1/1:5,26:30:75.26:2952,75,0	0/1:3,19:22:99:2121,0,142	1/1:9,14:23:42.10:1353,42,0	0/0:27,0:27:75.26:0,75,4579	0/0:17,0:17:48.16:0,48,3002	0/0:12,0:12:33.11:0,33,1884	0/0:28,0:28:84.27:0,84,4759	1/1:3,12:15:42.14:1551,42,0	0/0:20,0:20:57.19:0,57,3301	0/0:36,0:36:99:0,105,6250	0/0:25,0:25:72.25:0,72,4257	0/0:21,0:21:63.22:0,63,3709	0/0:14,0:14:42.14:0,42,2653	0/0:14,0:14:42.14:0,42,2421
chr10	40392513	.	C	CCAAT	6572.73	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-1.054;DP=614;FS=1.905;HRun=0;HaplotypeScore=131.3732;InbreedingCoeff=0.9822;MQ=88.40;MQ0=0;MQRankSum=-10.619;QD=56.66;ReadPosRankSum=0.574;VQSLOD=5.8332;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:36:93.28:0,93,1631	0/0:5,0:5:15.05:0,15,272	0/0:27,0:27:66.14:0,66,1121	0/0:28,0:28:65.41:0,65,1099	1/1:4,12:17:27.05:559,27,0	0/0:27,0:27:78.25:0,78,1370	0/0:26,0:26:69.22:0,69,1204	0/0:26,0:26:63.19:0,63,1052	0/0:28,0:28:78.25:0,78,1379	0/0:25,0:25:69.20:0,69,1237	0/0:7,0:7:21.07:0,21,378	0/0:20,0:20:57.18:0,57,994	0/0:17,0:17:48.16:0,48,868	0/0:24,0:24:72.25:0,72,1297	1/1:5,23:27:69.24:1742,69,0	1/1:5,12:17:36.12:927,36,0	1/1:7,24:33:81.28:2034,81,0	0/0:27,0:27:81.28:0,81,1448	0/0:17,0:17:45.15:0,45,811	0/0:14,0:14:42.14:0,42,758	0/0:27,0:27:78.24:0,78,1378	1/1:4,17:21:54.18:1311,54,0	0/0:15,0:15:39.13:0,39,704	0/0:30,1:31:9.33:0,9,1429	0/0:18,0:18:51.11:0,51,828	0/0:31,0:31:81.28:0,81,1466	0/0:11,0:11:30.10:0,30,533	0/0:10,0:10:27.09:0,27,487
chr10	40394007	.	TC	T	1677.15	PASS	AB=1.000;AC=35;AF=0.625;AN=56;BaseQRankSum=2.509;DP=345;FS=138.395;HRun=1;HaplotypeScore=42.3270;InbreedingCoeff=-0.1908;MQ=50.94;MQ0=76;MQRankSum=0.792;QD=5.22;ReadPosRankSum=2.739;VQSLOD=0.7107;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:32,0:24:5.34:258,0,5	0/1:7,0:3:9.98:14,0,10	0/0:16,0:3:5.78:0,6,33	0/1:14,0:5:0.85:1,0,11	1/1:5,7:8:15.63:94,16,0	0/1:10,0:9:24.38:24,0,89	0/1:15,0:14:35.12:88,0,35	0/0:8,0:8:14.01:0,14,105	0/1:8,0:6:8.55:63,0,9	1/1:13,0:9:16.20:100,16,0	1/1:7,0:6:12.31:75,12,0	0/1:10,0:5:13.91:14,0,26	0/1:11,0:6:24.16:60,0,24	0/1:4,0:3:0.42:0,0,15	0/1:9,0:6:12.41:45,0,12	0/1:4,0:4:6.71:60,0,7	0/1:37,0:26:99:129,0,124	0/1:24,0:12:48.91:49,0,50	0/1:8,0:6:11.32:32,0,11	1/1:10,0:6:12.05:42,12,0	1/1:5,0:2:2.22:7,2,0	0/1:6,0:4:4.81:55,0,5	1/1:11,0:8:16.83:102,17,0	0/1:8,0:4:18.43:18,0,31	1/1:9,0:8:21.20:149,21,0	1/1:7,0:6:13.19:64,13,0	0/1:10,0:9:27.95:28,0,56	1/1:30,0:20:44.26:268,44,0
chr10	40396410	.	CGT	C	2058.07	PASS	AB=0.794;AC=28;AF=0.538;AN=52;BaseQRankSum=1.957;DP=700;FS=3.653;HRun=0;HaplotypeScore=106.7326;InbreedingCoeff=0.5087;MQ=65.61;MQ0=11;MQRankSum=1.832;QD=5.16;ReadPosRankSum=2.237;VQSLOD=2.6704;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:34:2.90:0,3,21	1/1:11,5:17:17.88:174,18,0	./.	./.	1/1:14,4:19:11.86:110,12,0	0/0:15,0:23:11.95:0,12,94	0/0:29,0:37:12:0,12,105	0/0:31,0:30:0.89:0,1,2	0/0:11,0:19:8.72:0,9,94	1/1:14,0:16:3.96:25,4,0	0/1:11,5:15:16.88:113,0,17	0/0:17,0:23:20.97:0,21,174	0/0:19,0:19:21.02:0,21,261	1/1:20,0:25:8.52:42,9,0	1/1:17,4:22:14.87:142,15,0	0/1:20,6:27:26.18:124,0,26	0/1:22,4:29:20.41:147,0,20	1/1:13,5:18:20.55:205,21,0	1/1:18,8:24:15.01:150,15,0	0/1:20,6:26:77.55:107,0,78	1/1:49,5:53:17.80:184,18,0	1/1:17,8:24:6.48:65,6,0	0/0:12,0:16:5.60:0,6,52	0/0:23,0:28:14.90:0,15,134	0/0:17,0:17:1.31:0,1,3	1/1:31,4:37:20.71:188,21,0	1/1:9,5:14:15.04:160,15,0	1/1:14,12:27:29.90:303,30,0
chr10	40398237	.	C	CAAACA	7729.12	PASS	AC=18;AF=0.333;AN=54;BaseQRankSum=-10.764;DP=785;FS=11.856;HRun=0;HaplotypeScore=143.0565;InbreedingCoeff=0.8985;MQ=56.15;MQ0=8;MQRankSum=1.585;QD=27.80;ReadPosRankSum=-2.011;VQSLOD=3.8450;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:21,12:36:24.08:659,24,0	0/0:7,0:7:6.02:0,6,107	./.	0/0:25,0:12:3.01:0,3,38	1/1:14,15:30:42.10:1023,42,0	0/0:9,0:26:39.12:0,39,454	0/0:18,0:29:32.72:0,33,365	0/0:43,0:42:17.97:0,18,169	0/0:13,0:29:36.11:0,36,419	0/0:24,0:23:39.11:0,39,618	0/0:18,0:18:24:0,24,428	0/0:13,0:38:50.74:0,51,568	1/1:13,15:31:39.09:1005,39,0	1/1:20,7:27:9.50:248,10,0	1/1:11,15:27:36.12:1002,36,0	1/1:16,24:43:51.18:1419,51,0	1/1:17,12:31:30.10:835,30,0	0/0:31,0:31:63.16:0,63,1079	0/0:22,0:22:18.05:0,18,293	0/0:15,0:15:11.15:0,11,183	0/0:35,0:35:60.08:0,60,943	1/1:16,14:31:39.60:952,40,0	0/0:12,0:27:26.60:0,27,271	0/0:15,0:32:0.12:0,0,316	1/1:10,9:21:21.07:585,21,0	0/0:26,0:25:39.13:0,39,689	0/0:39,0:39:66.10:0,66,980	0/0:20,0:20:39.10:0,39,637
chr10	40398604	.	C	CTT	4560.94	PASS	AB=0.899;AC=34;AF=0.607;AN=56;BaseQRankSum=1.458;DP=550;FS=0.967;HRun=15;HaplotypeScore=91.1823;InbreedingCoeff=0.6171;MQ=67.48;MQ0=9;MQRankSum=-1.071;QD=11.75;ReadPosRankSum=-4.066;VQSLOD=2.9414;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:33:10.25:0,10,273	0/1:4,4:8:9.92:95,0,10	0/1:18,0:14:11.17:11,0,37	0/1:17,0:11:4.13:31,0,4	1/1:8,3:27:23.51:282,24,0	0/0:17,0:20:29.27:0,29,257	0/0:11,0:12:17.61:0,18,142	1/1:11,18:30:35.19:580,35,0	0/1:18,0:20:1.37:1,0,170	1/1:7,15:26:53.38:551,53,0	1/1:4,8:16:17.35:143,17,0	0/0:20,0:18:23.39:0,23,189	0/0:13,0:14:0.56:0,1,129	0/0:16,0:15:23.36:0,23,182	1/1:10,3:15:20.44:162,20,0	1/1:9,6:20:2.46:184,2,0	1/1:12,7:21:44.57:448,45,0	1/1:3,13:20:5.11:221,5,0	1/1:15,5:21:31.24:286,31,0	1/1:6,11:20:40.40:363,40,0	1/1:3,9:14:7.75:55,8,0	1/1:5,3:8:6.02:76,6,0	0/0:18,0:17:10.59:0,11,173	0/0:9,0:9:5.84:0,6,43	0/0:18,0:19:28.05:0,28,213	1/1:8,14:27:46.22:445,46,0	1/1:8,14:25:29.82:314,30,0	1/1:9,12:25:7.04:312,7,0
chr10	40402017	.	AC	A	1362.52	PASS	AB=0.979;AC=13;AF=0.232;AN=56;BaseQRankSum=2.535;DP=372;FS=0.000;HRun=9;HaplotypeScore=46.6034;InbreedingCoeff=0.6487;MQ=78.11;MQ0=0;MQRankSum=-2.349;QD=11.17;ReadPosRankSum=4.034;VQSLOD=2.0021;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:52.57:0,53,573	0/0:6,0:6:6.01:0,6,64	0/0:21,0:17:24.22:0,24,253	0/1:14,1:13:29.46:29,0,151	1/1:1,9:10:17.25:161,17,0	0/0:10,0:10:23.64:0,24,233	0/0:15,0:15:42.11:0,42,475	0/0:18,1:19:30.09:0,30,343	0/0:13,0:13:27.08:0,27,311	0/0:9,0:10:21.06:0,21,242	0/0:4,0:4:12.01:0,12,121	0/0:20,0:20:57.11:0,57,629	0/0:7,0:9:23.90:0,24,250	0/0:21,0:21:52.04:0,52,589	1/1:4,17:21:18.23:301,18,0	1/1:2,15:17:30.02:275,30,0	1/1:8,21:29:57.02:522,57,0	0/0:18,0:18:51.15:0,51,583	0/0:8,0:8:14.98:0,15,157	0/0:3,0:3:6.02:0,6,69	0/0:15,0:15:33.03:0,33,344	1/1:3,8:11:26.99:242,27,0	0/1:9,0:9:6.27:6,0,163	0/0:15,0:15:39.09:0,39,430	0/0:5,0:5:5.59:0,6,26	0/0:10,0:10:3.42:0,3,48	0/1:10,0:10:0.31:0,0,240	0/0:3,0:3:5.98:0,6,46
chr10	40403264	.	T	TC	3479.58	PASS	AB=0.683;AC=25;AF=0.446;AN=56;BaseQRankSum=-7.265;DP=357;FS=0.992;HRun=9;HaplotypeScore=42.8458;InbreedingCoeff=0.5702;MQ=82.26;MQ0=0;MQRankSum=-2.455;QD=16.49;ReadPosRankSum=1.187;VQSLOD=3.3303;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:32.97:0,33,285	0/1:3,6:10:5.17:159,0,5	0/0:7,0:7:20.98:0,21,177	0/0:16,0:16:30.16:0,30,230	0/1:14,2:16:2.02:177,0,2	0/0:10,0:10:29.99:0,30,260	0/0:16,0:16:38.97:0,39,336	1/1:7,8:15:13.28:135,13,0	0/0:11,0:11:26.97:0,27,230	1/1:3,10:13:17.11:198,17,0	0/1:9,3:12:4.89:178,0,5	0/0:14,0:14:32.98:0,33,286	0/0:11,0:11:26.97:0,27,234	0/0:11,0:11:29.98:0,30,260	1/1:4,13:17:33.09:365,33,0	1/1:0,9:9:21.02:232,21,0	0/1:4,9:13:16.02:288,0,16	1/1:1,14:15:16.16:405,16,0	1/1:1,6:7:18.05:199,18,0	0/1:9,9:18:25.04:205,0,25	1/1:6,3:9:4.42:93,4,0	1/1:2,6:8:12.03:133,12,0	0/0:19,0:19:41.98:0,42,364	0/0:7,0:7:11.98:0,12,104	0/0:8,0:8:24:0,24,208	0/1:4,6:10:5:178,0,5	0/1:10,15:26:1.88:208,0,2	1/1:0,13:13:30.08:327,30,0
chr10	40404663	.	C	CT	1157.57	PASS	AB=0.874;AC=14;AF=0.250;AN=56;BaseQRankSum=-4.965;DP=591;FS=6.732;HRun=13;HaplotypeScore=73.0464;InbreedingCoeff=0.3687;MQ=66.09;MQ0=1;MQRankSum=1.338;QD=6.54;ReadPosRankSum=0.752;VQSLOD=2.3486;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:74.79:0,75,622	0/1:11,1:12:7.05:7,0,102	0/0:9,0:6:4.75:0,5,21	0/0:10,0:9:2.18:0,2,19	1/1:5,17:22:18.59:289,19,0	0/0:17,0:17:38.61:0,39,266	0/0:20,1:22:11.86:0,12,210	0/0:38,0:39:76.24:0,76,514	0/0:19,0:19:44.52:0,45,301	0/0:23,0:23:46.87:0,47,326	0/0:15,1:16:1.81:0,2,155	0/1:14,1:16:24.67:25,0,64	0/0:24,0:24:47.12:0,47,337	0/0:18,0:18:29.63:0,30,204	1/1:11,12:22:27.03:250,27,0	1/1:5,13:18:11.43:182,11,0	0/1:7,27:35:13.60:300,0,14	0/0:22,0:22:50.55:0,51,349	0/1:12,2:14:4.09:4,0,120	0/0:19,0:19:29.56:0,30,202	0/0:21,0:21:35.15:0,35,232	1/1:6,11:17:15.30:245,15,0	0/1:12,0:12:16.27:16,0,49	0/0:27,0:27:50.40:0,50,347	0/0:25,2:26:3.55:0,4,297	0/0:24,0:27:42.80:0,43,289	0/0:22,0:22:50.35:0,50,341	0/1:8,0:8:8.26:8,0,63
chr10	40406548	.	G	GTTCT	4790.42	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=6.272;DP=460;FS=6.017;HRun=0;HaplotypeScore=79.3707;InbreedingCoeff=0.9766;MQ=86.22;MQ0=0;MQRankSum=-1.555;QD=56.36;ReadPosRankSum=0.661;VQSLOD=6.0525;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,117,2108	0/0:4,0:4:12.04:0,12,220	0/0:17,0:17:31.06:0,31,662	0/0:18,0:17:27.08:0,27,482	1/1:3,14:18:39.13:1029,39,0	0/0:12,0:12:33.11:0,33,607	0/0:22,0:22:63.20:0,63,1127	0/0:27,0:27:78.26:0,78,1408	0/0:10,0:10:30.10:0,30,540	0/0:10,0:10:27.09:0,27,497	0/0:10,0:10:30.10:0,30,543	0/0:13,0:13:36.12:0,36,662	0/0:4,0:4:12.04:0,12,221	0/0:13,0:13:33.11:0,33,607	1/1:2,9:12:30.10:791,30,0	1/1:4,8:11:24.08:633,24,0	1/1:4,31:36:78.27:2021,78,0	0/0:18,0:18:51.13:0,51,874	0/0:27,0:27:75.21:0,75,1272	0/0:12,0:12:30.10:0,30,552	0/0:28,0:28:75.23:0,75,1348	1/1:0,6:7:12.04:316,12,0	0/0:12,0:12:33.11:0,33,607	0/0:24,0:24:69.24:0,69,1257	0/0:12,0:12:36.08:0,36,627	0/0:11,0:11:30.05:0,30,487	0/0:11,0:11:30.10:0,30,530	0/0:18,0:18:45.15:0,45,828
chr10	40406665	.	C	CTTTATTTA	4594.42	PASS	AC=46;AF=0.958;AN=48;BaseQRankSum=-0.843;DP=337;FS=0.000;HRun=0;HaplotypeScore=90.7527;InbreedingCoeff=0.0501;MQ=68.32;MQ0=2;MQRankSum=-1.353;QD=15.47;ReadPosRankSum=2.137;VQSLOD=3.3385;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:18,3:21:8.17:291,8,0	1/1:2,2:4:3.01:122,3,0	./.	./.	1/1:9,0:9:9.03:208,9,0	1/1:13,1:17:6.02:227,6,0	1/1:4,0:6:5.99:49,6,0	1/1:48,0:48:51.17:1121,51,0	1/1:12,0:13:2.99:24,3,0	1/1:10,0:10:2.53:120,3,0	1/1:10,0:10:9.03:267,9,0	1/1:3,0:6:2.99:24,3,0	1/1:4,1:5:3.01:122,3,0	1/1:10,1:13:6.02:240,6,0	./.	1/1:6,0:10:9.03:313,9,0	1/1:24,0:27:8.06:214,8,0	1/1:15,3:18:9.03:367,9,0	0/0:17,0:17:2.04:0,2,6	1/1:10,0:10:3.01:107,3,0	1/1:7,0:7:3.01:37,3,0	./.	1/1:9,0:9:6.01:70,6,0	1/1:6,0:9:5.99:49,6,0	1/1:9,0:12:8.98:73,9,0	1/1:8,0:8:3.01:90,3,0	1/1:10,0:10:9.03:270,9,0	1/1:15,0:13:6.02:189,6,0
chr10	40408664	.	C	CT	5799	PASS	AB=0.584;AC=30;AF=0.536;AN=56;BaseQRankSum=-8.637;DP=600;FS=14.436;HRun=11;HaplotypeScore=66.3388;InbreedingCoeff=0.7819;MQ=62.54;MQ0=10;MQRankSum=-1.219;QD=17.21;ReadPosRankSum=-0.305;VQSLOD=4.4171;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:75.80:0,76,569	0/1:2,6:8:2.28:148,0,2	0/0:5,0:5:7.04:0,7,32	0/0:13,0:13:14.60:0,15,120	1/1:2,16:18:37.19:353,37,0	0/0:28,1:29:26.09:0,26,367	0/0:24,0:24:47.65:0,48,354	1/1:12,18:30:16.66:517,17,0	0/0:15,0:15:16.22:0,16,231	1/1:12,21:29:59.79:535,60,0	1/1:5,11:15:27.01:263,27,0	0/0:24,0:24:51.96:0,52,398	0/0:24,0:25:46.43:0,46,352	0/0:18,0:18:38.66:0,39,289	1/1:7,16:23:18.85:373,19,0	1/1:9,15:23:2.99:354,3,0	0/1:9,19:27:22.61:415,0,23	1/1:3,23:25:13.65:501,14,0	1/1:7,10:16:33.03:319,33,0	1/1:7,16:23:36.50:352,36,0	1/1:3,10:13:0.86:190,1,0	1/1:3,3:6:3.01:30,3,0	0/0:23,0:22:44.79:0,45,346	0/0:16,0:17:34.73:0,35,261	0/0:29,0:30:76.11:0,76,559	1/1:4,21:25:66.04:641,66,0	1/1:11,22:32:54.06:532,54,0	1/1:1,9:9:27.05:274,27,0
chr10	40409362	.	T	TA	5576.04	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-13.933;DP=702;FS=4.945;HRun=1;HaplotypeScore=63.8298;InbreedingCoeff=0.9998;MQ=84.95;MQ0=0;MQRankSum=-2.632;QD=40.70;ReadPosRankSum=4.466;VQSLOD=5.4329;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,135,1730	0/0:10,0:10:30.08:0,30,373	0/0:28,0:28:84.26:0,84,1064	0/0:16,0:16:48.08:0,48,571	1/1:0,24:24:63.21:944,63,0	0/0:19,0:19:54.15:0,54,671	0/0:16,0:16:42.14:0,42,545	0/0:38,0:38:99:0,111,1442	0/0:28,0:28:84.27:0,84,1090	0/0:33,0:33:93.29:0,93,1180	0/0:23,0:23:66.21:0,66,856	0/0:24,0:24:66.20:0,66,841	0/0:25,0:25:75.24:0,75,974	0/0:27,0:27:78.24:0,78,998	1/1:0,37:37:99:1529,102,0	1/1:1,29:30:75.25:1124,75,0	1/1:0,18:18:51.17:764,51,0	0/0:12,0:12:33.11:0,33,428	0/0:30,0:30:87.25:0,87,1091	0/0:25,0:25:72.23:0,72,935	0/0:23,0:23:69.19:0,69,866	1/1:0,28:28:81.27:1214,81,0	0/0:20,0:20:60.20:0,60,779	0/0:26,0:26:78.25:0,78,1013	0/0:20,0:20:57.19:0,57,740	0/0:32,0:32:96.31:0,96,1247	0/0:27,0:27:81.23:0,81,1021	0/0:17,0:17:51.17:0,51,662
chr10	40409897	.	TAA	T	1901.38	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=0.998;DP=461;FS=2.862;HRun=14;HaplotypeScore=85.1125;InbreedingCoeff=0.8941;MQ=62.01;MQ0=0;MQRankSum=-0.366;QD=14.74;ReadPosRankSum=3.397;VQSLOD=3.1617;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:23:55.12:0,55,598	0/0:4,0:9:20.89:0,21,170	0/0:24,0:8:11.99:0,12,78	0/0:23,0:13:4.49:0,4,151	0/0:22,0:22:34.11:0,34,266	0/0:14,0:16:38.60:0,39,440	0/0:18,0:20:51.16:0,51,688	1/1:13,19:32:53.91:494,54,0	0/0:16,0:17:34.76:0,35,404	0/0:10,0:22:36.39:0,36,310	0/0:10,0:23:38.54:0,39,351	0/0:15,0:15:39.10:0,39,486	0/0:8,0:8:21.07:0,21,287	0/0:15,0:15:42.13:0,42,565	0/0:2,0:6:3:0,3,29	0/0:6,0:16:23.36:0,23,216	0/0:11,0:11:15.91:0,16,101	0/0:2,0:12:15.90:0,16,143	1/1:4,9:13:17.83:213,18,0	1/1:10,10:19:28.92:255,29,0	1/1:1,7:8:18.01:167,18,0	0/0:5,0:5:15.02:0,15,143	0/0:16,0:18:34.45:0,34,388	0/0:9,0:9:20.99:0,21,229	0/0:14,1:15:10.80:0,11,414	1/1:5,15:21:9.67:345,10,0	1/1:7,16:24:45.76:492,46,0	1/1:5,4:9:6.98:124,7,0
chr10	40411193	.	AACACAC	A	1055.34	PASS	AB=0.821;AC=17;AF=0.327;AN=52;BaseQRankSum=1.892;DP=508;FS=11.474;HRun=0;HaplotypeScore=110.5924;InbreedingCoeff=0.6519;MQ=61.60;MQ0=6;MQRankSum=-2.749;QD=6.94;ReadPosRankSum=-1.056;VQSLOD=1.4877;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:17.49:0,17,406	./.	./.	0/0:31,0:20:3.01:0,3,67	0/0:10,0:15:12.02:0,12,285	0/0:13,0:14:39.13:0,39,1196	0/0:29,0:31:54.64:0,55,1370	1/1:22,5:26:13.92:209,14,0	0/0:12,0:12:21.07:0,21,556	1/1:8,3:11:9.02:150,9,0	1/1:5,6:12:11.91:121,12,0	0/0:14,0:20:26.26:0,26,724	0/0:12,0:12:14.88:0,15,341	0/0:14,0:14:17.61:0,18,420	0/0:7,0:20:6.02:0,6,79	0/0:7,0:13:3.01:0,3,59	0/0:15,0:33:24.08:0,24,605	0/1:18,5:23:85.26:85,0,112	0/0:12,0:12:0:0,0,0	1/1:7,3:10:3.01:61,3,0	1/1:40,0:40:8.97:129,9,0	0/0:12,0:12:3.01:0,3,70	0/0:11,0:11:21.07:0,21,588	0/0:25,0:27:45.15:0,45,1133	0/0:7,0:7:2.90:0,3,90	1/1:9,0:10:3.01:42,3,0	1/1:7,6:14:14.99:287,15,0	1/1:3,2:5:8.99:143,9,0
chr10	40412724	.	GT	G	565.21	PASS	AB=0.540;AC=7;AF=0.125;AN=56;BaseQRankSum=10.418;DP=510;FS=6.136;HRun=1;HaplotypeScore=96.4304;InbreedingCoeff=0.5350;MQ=66.98;MQ0=5;MQRankSum=-10.046;QD=6.50;ReadPosRankSum=3.414;VQSLOD=0.9471;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:60.52:0,61,553	0/0:9,0:9:27.09:0,27,414	0/0:37,0:26:78.25:0,78,1142	0/0:21,0:15:35.17:0,35,408	1/1:4,8:14:4.31:98,4,0	0/0:26,0:26:78.25:0,78,1193	0/0:25,0:25:72.23:0,72,1085	0/0:13,0:12:32.91:0,33,341	0/0:13,0:13:39.13:0,39,612	0/0:22,0:22:66.22:0,66,995	0/0:18,0:18:54.17:0,54,822	0/0:23,0:23:66.22:0,66,1015	0/0:7,0:7:14.03:0,14,131	0/0:10,0:10:24.03:0,24,316	0/1:4,10:16:28.19:146,0,28	1/1:1,18:26:44.88:276,45,0	0/1:2,8:16:1.21:110,0,1	0/0:16,0:14:36.12:0,36,556	0/0:18,0:18:54.15:0,54,630	0/0:18,0:15:39.98:0,40,410	0/0:25,0:24:71.34:0,71,718	0/1:1,10:14:20.41:70,0,20	0/0:19,0:19:54.16:0,54,815	0/0:25,0:25:72.24:0,72,1131	0/0:9,0:9:19.24:0,19,163	0/0:22,0:20:59.97:0,60,632	0/0:16,0:16:39.57:0,40,420	0/0:5,0:4:11.77:0,12,108
chr10	40412726	.	GTGTGT	G	2247.12	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=9.489;DP=499;FS=1.014;HRun=0;HaplotypeScore=126.1631;InbreedingCoeff=0.6828;MQ=64.84;MQ0=8;MQRankSum=-9.079;QD=18.57;ReadPosRankSum=-0.082;VQSLOD=3.3608;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:16,0:16:56.43:56,0,128	0/0:9,0:9:27.09:0,27,581	0/0:36,0:25:75.22:0,75,2004	0/0:20,0:13:29.44:0,29,561	1/1:5,8:13:13.24:320,13,0	0/0:27,0:27:81.23:0,81,2195	0/0:27,0:27:78.22:0,78,1958	0/0:13,0:11:16.41:0,16,336	0/0:13,0:13:39.13:0,39,1161	0/0:20,0:20:60.20:0,60,1472	0/0:19,0:19:48.45:0,48,1137	0/0:22,0:22:63.17:0,63,1790	0/1:6,0:6:32.11:33,0,32	0/1:13,0:13:3.06:3,0,179	1/1:5,10:15:28.75:469,29,0	1/1:9,18:27:55.56:848,56,0	1/1:9,8:15:18.93:415,19,0	0/0:16,0:14:36.12:0,36,813	0/0:17,0:17:51.07:0,51,630	0/0:17,0:14:41.88:0,42,424	0/0:25,0:24:37.91:0,38,728	1/1:4,10:14:17.61:281,18,0	0/0:18,0:18:51.17:0,51,1471	0/0:26,0:26:75.24:0,75,2134	0/0:8,0:8:6.10:0,6,95	0/0:23,0:20:53.10:0,53,660	0/0:17,0:16:8.61:0,9,421	0/0:5,0:4:10.58:0,11,106
chr10	40412730	.	GT	G	4889.43	PASS	AB=0.985;AC=37;AF=0.661;AN=56;BaseQRankSum=9.388;DP=506;FS=10.789;HRun=1;HaplotypeScore=84.9536;InbreedingCoeff=0.7544;MQ=67.12;MQ0=7;MQRankSum=-3.564;QD=14.95;ReadPosRankSum=2.085;VQSLOD=3.6115;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:17:12.57:175,13,0	1/1:9,0:9:15.76:51,16,0	0/0:30,0:20:60.18:0,60,799	0/1:20,1:15:3.50:4,0,221	1/1:17,0:17:19.25:133,19,0	0/0:26,0:26:78.17:0,78,978	0/0:26,0:26:75.01:0,75,876	1/1:1,11:10:29.97:354,30,0	0/0:13,0:13:39.09:0,39,518	0/0:19,0:19:11.31:0,11,148	1/1:20,0:20:30.98:93,31,0	0/0:20,0:20:57.16:0,57,777	1/1:7,0:7:10.72:99,11,0	1/1:17,0:17:7.80:138,8,0	1/1:17,0:17:16.66:210,17,0	1/1:29,0:29:46.13:300,46,0	1/1:18,0:16:7.41:123,7,0	0/1:15,0:13:3.33:28,0,3	1/1:2,13:15:13.91:457,14,0	1/1:1,17:15:41.60:486,42,0	1/1:8,16:23:63.15:774,63,0	1/1:14,0:14:0.08:71,0,0	0/0:18,0:18:50.17:0,50,623	0/0:27,0:27:75.17:0,75,967	0/1:11,0:11:0.89:77,0,1	1/1:4,18:19:53.57:658,54,0	1/1:1,18:18:38.97:535,39,0	1/1:1,4:4:8.86:125,9,0
chr10	40412731	.	TG	T	2290.30	PASS	AB=1.000;AC=25;AF=0.446;AN=56;BaseQRankSum=5.535;DP=512;FS=0.000;HRun=8;HaplotypeScore=94.6115;InbreedingCoeff=0.7466;MQ=67.73;MQ0=7;MQRankSum=-1.193;QD=10.22;ReadPosRankSum=5.052;VQSLOD=1.9840;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:15,0:15:7.58:8,0,120	1/1:0,9:9:24.04:232,24,0	0/0:30,0:20:53.95:0,54,608	0/0:21,0:15:10.87:0,11,216	0/1:18,0:18:6.31:6,0,123	0/0:25,0:25:66.20:0,66,793	0/0:26,0:26:60.18:0,60,717	1/1:13,0:12:17.92:102,18,0	0/0:13,0:13:36.10:0,36,422	1/1:6,13:19:36.05:348,36,0	1/1:0,20:20:54.09:521,54,0	0/0:20,0:20:57.11:0,57,649	0/1:10,0:10:3.06:3,0,85	0/0:17,0:17:29.17:0,29,276	0/0:17,0:17:10.41:0,10,78	0/0:30,0:30:16.72:0,17,145	0/0:19,0:17:14.74:0,15,128	1/1:3,12:13:30.05:290,30,0	1/1:16,0:16:2.40:166,2,0	1/1:19,0:16:9.41:141,9,0	1/1:22,0:22:23.37:201,23,0	0/0:15,0:15:9.29:0,9,84	0/0:18,0:18:48.14:0,48,564	0/0:27,0:27:69.20:0,69,818	0/0:10,0:10:5.47:0,5,171	1/1:19,1:19:36.29:236,36,0	1/1:18,0:18:37.21:199,37,0	1/1:5,0:4:8.71:47,9,0
chr10	40416823	.	T	TA	3494.47	PASS	AB=0.579;AC=13;AF=0.232;AN=56;BaseQRankSum=-11.137;DP=597;FS=4.144;HRun=9;HaplotypeScore=58.6600;InbreedingCoeff=0.9344;MQ=73.88;MQ0=1;MQRankSum=-0.966;QD=23.93;ReadPosRankSum=2.928;VQSLOD=4.6687;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:56.98:0,57,495	0/0:17,0:17:47.98:0,48,414	0/0:22,0:19:44.90:0,45,377	0/0:18,0:17:30.94:0,31,230	1/1:3,21:24:57.11:617,57,0	0/0:21,0:20:59.97:0,60,517	0/0:8,0:8:14.99:0,15,130	0/0:41,0:42:99:0,107,909	0/0:15,0:15:38.97:0,39,334	0/0:41,0:41:99:0,111,951	0/0:26,0:26:71.98:0,72,625	0/0:16,0:16:38.99:0,39,338	1/1:6,21:27:31.10:569,31,0	1/1:2,9:11:24.06:266,24,0	1/1:5,24:29:43.63:705,44,0	1/1:1,19:21:44.33:471,44,0	1/1:2,21:23:60.16:664,60,0	0/0:11,0:12:29.02:0,29,240	0/0:21,0:21:50.95:0,51,443	0/0:30,0:30:89.96:0,90,776	0/0:7,0:7:17.97:0,18,153	0/1:3,8:11:1.99:204,0,2	0/0:16,0:16:47.01:0,47,393	0/0:11,0:11:32.98:0,33,283	0/0:32,0:32:92.98:0,93,807	0/0:35,0:35:92.97:0,93,807	0/0:29,0:29:59.93:0,60,517	0/0:10,0:10:26.01:0,26,208
chr10	40419152	.	G	GA	24961.42	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-9.243;DP=881;FS=12.926;HRun=0;HaplotypeScore=88.8718;InbreedingCoeff=1.0000;MQ=87.00;MQ0=0;MQRankSum=-4.760;QD=44.26;ReadPosRankSum=2.115;VQSLOD=3.9630;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:57:99:0,169,2306	1/1:1,15:16:45.15:691,45,0	0/0:29,0:29:81.16:0,81,1042	0/0:33,0:34:93.76:0,94,1264	1/1:0,29:29:78.27:1246,78,0	0/0:17,0:17:51.17:0,51,713	0/0:23,0:23:69.23:0,69,964	1/1:0,42:42:99:1869,126,0	0/0:35,0:35:99:0,105,1458	1/1:0,42:42:99:1933,123,0	1/1:0,19:19:51.17:801,51,0	0/0:38,0:38:99:0,114,1593	1/1:0,32:32:93.21:1453,93,0	1/1:0,30:30:87.30:1390,87,0	1/1:0,39:39:99:1582,99,0	1/1:2,38:40:99:1726,108,0	1/1:1,33:34:93.32:1486,93,0	1/1:0,18:18:48.16:767,48,0	1/1:0,19:19:57.19:911,57,0	1/1:1,32:33:96.33:1533,96,0	1/1:1,48:49:99:2107,132,0	1/1:1,33:34:99:1566,99,0	0/0:35,0:35:99:0,105,1433	0/0:27,0:27:75.25:0,75,1041	0/0:22,0:22:66.22:0,66,922	1/1:0,38:38:99:1797,114,0	1/1:0,35:35:96.33:1529,96,0	1/1:0,15:15:36.12:575,36,0
chr10	40420028	.	ATTC	A	5693.01	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=11.405;DP=559;FS=7.100;HRun=0;HaplotypeScore=108.6977;InbreedingCoeff=0.9988;MQ=86.41;MQ0=1;MQRankSum=-2.431;QD=40.96;ReadPosRankSum=3.788;VQSLOD=6.2855;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:48.16:0,48,1081	0/0:8,0:8:24.08:0,24,509	0/0:23,0:23:69.24:0,69,1477	0/0:17,0:17:51.07:0,51,1027	1/1:1,20:21:42.14:715,42,0	0/0:15,0:15:42.14:0,42,966	0/0:21,0:21:60.21:0,60,1363	0/0:25,0:25:75.25:0,75,1687	0/0:19,0:19:57.18:0,57,1270	0/0:23,0:23:69.24:0,69,1589	0/0:16,0:16:48.16:0,48,1039	0/0:19,0:19:57.20:0,57,1314	1/1:0,19:19:48.16:818,48,0	1/1:3,7:10:21.07:357,21,0	1/1:2,16:18:39.13:665,39,0	1/1:1,23:24:66.23:1125,66,0	1/1:0,22:22:57.20:971,57,0	0/0:28,0:28:78.27:0,78,1752	0/0:25,0:25:72.22:0,72,1515	0/0:31,0:31:93.31:0,93,2087	0/0:20,0:20:60.21:0,60,1340	1/1:2,23:25:63.17:1042,63,0	0/0:19,0:19:54.19:0,54,1227	0/0:15,0:15:42.09:0,42,805	0/0:18,0:18:48.16:0,48,1100	0/0:22,0:21:63.22:0,63,1454	0/0:28,0:28:75.26:0,75,1725	0/0:11,0:11:33.11:0,33,707
chr10	40420092	.	CA	C	712.02	PASS	AB=0.963;AC=17;AF=0.304;AN=56;BaseQRankSum=-2.696;DP=578;FS=3.847;HRun=15;HaplotypeScore=145.9514;InbreedingCoeff=0.1682;MQ=74.32;MQ0=5;MQRankSum=0.302;QD=2.69;ReadPosRankSum=0.870;VQSLOD=0.6402;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:24:25.53:0,26,185	0/0:11,0:11:24.25:0,24,88	0/1:39,1:17:7.24:7,0,94	0/0:51,0:23:17.56:0,18,112	0/0:38,0:39:54.48:0,54,421	0/1:11,3:14:18.76:19,0,219	0/0:13,0:16:21.96:0,22,228	0/1:21,0:21:20.95:21,0,64	0/1:13,3:17:38.32:38,0,166	0/0:16,1:16:5.95:0,6,54	0/1:10,0:10:4.82:5,0,22	1/1:12,7:19:9.78:177,10,0	0/0:17,0:18:40.32:0,40,213	0/0:16,0:16:34.58:0,35,195	0/0:17,0:17:26.45:0,26,136	0/0:12,1:14:14.35:0,14,127	0/0:20,0:20:15.89:0,16,158	0/0:29,0:29:37.62:0,38,151	0/1:22,0:22:42.32:42,0,46	0/1:21,0:21:2.71:3,0,72	0/1:12,0:12:2.80:17,0,3	0/0:17,0:18:20.20:0,20,102	1/1:4,15:22:41.53:248,42,0	1/1:4,14:19:19.12:235,19,0	0/0:8,0:23:37.38:0,37,212	0/1:17,1:17:30.34:30,0,40	0/1:18,0:18:2.76:23,0,3	0/1:12,0:12:15.60:16,0,16
chr10	40420106	.	A	AC	2196.55	PASS	AB=0.786;AC=22;AF=0.393;AN=56;BaseQRankSum=5.207;DP=650;FS=4.229;HRun=0;HaplotypeScore=156.2310;InbreedingCoeff=0.8290;MQ=77.29;MQ0=9;MQRankSum=0.018;QD=7.87;ReadPosRankSum=-0.273;VQSLOD=3.3902;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:26:43.25:0,43,352	1/1:11,0:11:3.88:49,4,0	0/0:56,0:26:37.04:0,37,309	0/1:85,0:40:2.67:3,0,327	0/0:41,0:41:99:0,105,722	0/0:15,0:15:44.95:0,45,491	0/0:19,0:19:54.22:0,54,518	1/1:6,15:21:6.97:279,7,0	0/0:15,0:15:42.74:0,43,404	1/1:20,0:19:21.40:158,21,0	1/1:10,0:10:22.77:114,23,0	0/0:19,0:19:56.49:0,56,432	0/0:21,0:21:38.05:0,38,215	0/0:15,0:15:33.33:0,33,204	0/0:18,0:18:28.71:0,29,201	0/0:16,0:16:41.86:0,42,252	0/0:23,0:23:43.55:0,44,345	1/1:26,0:27:29.84:165,30,0	1/1:9,16:23:9.74:381,10,0	0/1:5,15:20:0.90:250,0,1	1/1:3,10:13:1.30:116,1,0	0/0:20,0:20:57.84:0,58,318	0/0:21,0:21:56.13:0,56,369	0/0:22,0:22:56.23:0,56,394	0/0:23,0:22:29.19:0,29,190	1/1:7,14:20:15.30:337,15,0	1/1:2,14:16:38.29:354,38,0	1/1:2,8:10:16.68:196,17,0
chr10	40420107	.	A	AC	5254.89	PASS	AB=1.000;AC=37;AF=0.661;AN=56;BaseQRankSum=8.625;DP=653;FS=2.576;HRun=2;HaplotypeScore=149.5865;InbreedingCoeff=0.9041;MQ=76.55;MQ0=9;MQRankSum=0.283;QD=11.97;ReadPosRankSum=0.390;VQSLOD=3.5791;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:18.78:0,19,250	1/1:11,0:11:25.36:109,25,0	0/0:55,0:26:5.84:0,6,152	0/1:81,0:39:9.85:10,0,252	1/1:39,2:41:13.69:385,14,0	0/0:15,0:15:44.85:0,45,439	0/0:19,0:19:50.53:0,51,445	1/1:21,0:24:37.24:429,37,0	0/0:15,0:16:36.25:0,36,303	1/1:21,0:20:41.33:224,41,0	1/1:10,0:10:26.34:134,26,0	0/0:19,0:19:55.90:0,56,381	1/1:12,7:20:43.28:427,43,0	1/1:8,6:15:32.78:317,33,0	1/1:19,1:20:37.31:218,37,0	1/1:15,1:16:24.58:169,25,0	1/1:22,0:22:38.27:197,38,0	1/1:29,0:29:58.25:250,58,0	1/1:23,0:23:59.79:491,60,0	1/1:20,0:21:34.46:328,34,0	1/1:13,0:13:19.22:174,19,0	1/1:21,0:21:47.70:290,48,0	0/0:21,0:21:56.02:0,56,357	0/0:22,0:22:56.21:0,56,384	0/0:21,0:20:20.34:0,20,152	1/1:19,1:20:54.86:456,55,0	1/1:16,0:17:43.04:393,43,0	1/1:10,0:10:24.91:254,25,0
chr10	40420495	.	A	AACAC	2937.94	PASS	AB=0.923;AC=27;AF=0.519;AN=52;BaseQRankSum=-1.769;DP=605;FS=12.469;HRun=0;HaplotypeScore=164.3920;InbreedingCoeff=0.4119;MQ=60.40;MQ0=12;MQRankSum=2.510;QD=8.09;ReadPosRankSum=-0.751;VQSLOD=2.2854;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:32,4:37:50.01:734,50,0	1/1:16,0:16:1.47:20,1,0	./.	./.	1/1:21,0:21:8.54:27,9,0	0/0:21,0:21:20.88:0,21,301	0/0:24,0:28:35.90:0,36,479	0/1:25,0:25:3.05:3,0,39	0/0:22,0:23:42.14:0,42,638	0/0:24,0:24:1.15:0,1,29	0/0:8,0:7:0:0,0,0	0/1:20,8:35:66.40:464,0,66	1/1:15,0:20:19.06:225,19,0	1/1:14,0:16:6.27:102,6,0	0/0:25,0:25:2.80:0,3,16	0/0:16,0:16:7.51:0,8,48	0/1:10,1:11:3.04:64,0,3	0/0:15,0:15:5.87:0,6,54	0/0:11,0:11:14.94:0,15,117	1/1:9,0:9:3.76:14,4,0	1/1:39,0:37:4.23:26,4,0	0/1:23,0:23:2.19:2,0,14	1/1:6,8:20:8.27:149,8,0	1/1:23,6:37:12.68:973,13,0	1/1:13,4:17:14.78:271,15,0	0/1:23,0:22:20.50:20,0,86	1/1:13,0:12:1.95:6,2,0	0/0:3,0:3:3.01:0,3,38
chr10	40420531	.	CACATGCACAT	C	2390.81	PASS	AB=0.970;AC=18;AF=0.321;AN=56;BaseQRankSum=6.329;DP=632;FS=25.243;HRun=0;HaplotypeScore=220.0369;InbreedingCoeff=0.0061;MQ=51.97;MQ0=24;MQRankSum=-7.378;QD=9.30;ReadPosRankSum=0.907;VQSLOD=1.1810;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,100,2154	0/1:12,0:12:76.40:76,0,132	0/0:29,0:7:14.32:0,14,180	0/0:32,0:7:11.34:0,11,141	0/0:14,0:14:5.24:0,5,13	0/0:30,0:29:78.74:0,79,3018	0/0:40,0:40:87.94:0,88,3035	0/1:17,0:16:99:285,0,149	0/0:30,0:30:78.57:0,79,3228	0/1:25,0:25:99:675,0,210	0/1:9,0:8:0.22:0,0,0	0/0:29,0:29:66.23:0,66,2632	0/1:18,0:18:93.77:94,0,416	0/1:16,0:16:95.95:96,0,114	1/1:19,1:20:1.12:83,1,0	0/1:15,0:15:99:154,0,258	0/1:13,0:13:99:162,0,181	0/1:12,0:12:48.47:159,0,48	1/1:12,0:10:27.87:282,28,0	0/0:11,0:11:7.94:0,8,51	0/1:17,21:35:1.04:1,0,89	0/0:22,0:22:1.21:0,1,4	0/0:24,0:24:30.46:0,30,1020	0/0:43,0:43:99:0,114,4144	0/0:19,0:18:39.56:0,40,863	0/1:25,0:24:99:405,0,132	1/1:18,0:18:2.40:15,2,0	0/1:7,0:6:3.77:60,0,4
chr10	40420533	.	CATGCACAT	C	3963.26	PASS	AB=0.943;AC=29;AF=0.518;AN=56;BaseQRankSum=8.045;DP=606;FS=20.627;HRun=0;HaplotypeScore=195.4853;InbreedingCoeff=0.4392;MQ=52.26;MQ0=22;MQRankSum=-8.466;QD=13.48;ReadPosRankSum=-0.864;VQSLOD=1.2299;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:95.37:0,95,1588	1/1:12,0:12:10.65:232,11,0	0/0:30,0:7:14.32:0,14,180	0/0:27,0:6:11.37:0,11,141	1/1:6,7:14:11.52:116,12,0	0/0:29,0:28:72.23:0,72,2556	0/0:37,0:37:81.96:0,82,2625	1/1:3,12:14:8.90:364,9,0	0/0:28,0:28:75.67:0,76,2769	0/1:25,0:25:5.76:759,0,6	0/1:4,4:7:0.21:0,0,0	0/0:29,0:29:66.20:0,66,2180	0/1:18,0:18:98.24:98,0,260	0/1:16,0:16:44.85:135,0,45	1/1:9,11:20:11.79:165,12,0	0/1:13,1:14:99:208,0,138	0/1:13,0:13:99:244,0,120	1/1:10,1:11:16.31:270,16,0	1/1:7,5:10:29.66:443,30,0	1/1:11,0:11:0.13:34,0,0	0/1:37,0:34:11.68:41,0,12	1/1:2,18:20:5.88:63,6,0	0/0:21,0:21:30.47:0,30,919	0/0:42,0:42:99:0,111,3458	0/0:18,0:17:39.08:0,39,640	1/1:8,15:22:3.92:604,4,0	1/1:4,14:18:8.86:84,9,0	1/1:6,1:6:5.35:103,5,0
chr10	40420534	.	ATG	A	2948.40	PASS	AB=0.852;AC=31;AF=0.554;AN=56;BaseQRankSum=9.076;DP=582;FS=0.446;HRun=0;HaplotypeScore=153.5023;InbreedingCoeff=0.2448;MQ=53.88;MQ0=20;MQRankSum=-7.872;QD=7.84;ReadPosRankSum=-2.437;VQSLOD=2.9263;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:48,0:48:99:135,0,927	1/1:5,6:11:25.96:238,26,0	0/0:32,0:9:2.20:0,2,131	0/0:26,0:7:0.98:0,1,95	1/1:8,6:14:11.98:119,12,0	0/0:28,0:27:69.23:0,69,1174	0/0:37,0:37:79.15:0,79,1244	0/1:13,0:12:51.11:185,0,51	0/0:28,0:28:75.12:0,75,1327	1/1:4,18:22:47.16:582,47,0	0/0:5,3:7:0.26:0,0,0	0/0:27,0:27:60.17:0,60,846	1/1:14,2:16:26.71:258,27,0	1/1:10,6:16:17.31:200,17,0	0/1:14,5:19:3.64:94,0,4	0/1:7,5:12:35.78:118,0,36	0/1:9,3:12:19.15:160,0,19	0/1:6,4:10:11.18:143,0,11	1/1:7,5:10:28.17:271,28,0	1/1:4,7:11:0.35:27,0,0	1/1:28,5:31:7.21:55,7,0	1/1:19,1:20:4.19:33,4,0	0/0:20,0:20:33.22:0,33,502	0/1:40,2:42:1.78:2,0,1341	0/1:17,0:16:9.96:10,0,433	1/1:18,4:21:38.58:382,39,0	1/1:15,3:18:8.24:73,8,0	0/1:4,3:6:26.55:40,0,27
chr10	40420537	.	CACAT	C	1318.03	PASS	AB=0.932;AC=29;AF=0.518;AN=56;BaseQRankSum=10.880;DP=549;FS=18.945;HRun=0;HaplotypeScore=163.7667;InbreedingCoeff=0.3441;MQ=54.45;MQ0=17;MQRankSum=-9.104;QD=5.17;ReadPosRankSum=-0.458;VQSLOD=1.4794;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:82.66:0,83,1602	1/1:1,6:9:22.92:134,23,0	0/0:33,0:9:5.64:0,6,214	0/0:27,0:7:1.34:0,1,179	1/1:7,7:14:11.09:59,11,0	0/0:27,0:27:72.72:0,73,2019	0/0:34,0:34:88.12:0,88,2355	0/1:12,0:12:27.40:49,0,27	0/0:28,0:28:75.73:0,76,2153	0/1:18,3:21:1.06:289,0,1	1/1:6,3:8:0.17:1,0,0	0/0:25,0:25:60.21:0,60,1734	0/1:17,0:17:22.88:23,0,191	0/1:15,0:15:33.30:56,0,33	1/1:14,4:18:11.03:63,11,0	0/1:9,1:10:71.99:90,0,72	0/1:9,1:10:69.18:88,0,69	1/1:6,2:8:14.42:102,14,0	1/1:8,4:10:22.79:197,23,0	1/1:9,1:10:5.09:27,5,0	1/1:27,1:26:0.66:3,1,0	1/1:18,1:19:2.85:16,3,0	0/0:19,0:19:34.05:0,34,954	0/0:41,0:41:99:0,111,3024	0/0:18,0:17:42.09:0,42,786	0/1:16,4:20:16.72:245,0,17	1/1:15,2:18:5.88:37,6,0	1/1:5,0:4:2.97:20,3,0
chr10	40420610	.	T	TAGAG	10993.81	PASS	AB=0.808;AC=32;AF=0.571;AN=56;BaseQRankSum=12.815;DP=702;FS=1.137;HRun=0;HaplotypeScore=238.4684;InbreedingCoeff=0.5421;MQ=55.33;MQ0=12;MQRankSum=-12.650;QD=25.99;ReadPosRankSum=-4.012;VQSLOD=3.8755;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,117,1931	1/1:5,10:15:26.96:637,27,0	0/0:53,0:17:9.59:0,10,415	0/1:83,0:33:14.46:14,0,319	1/1:6,11:17:27.09:590,27,0	0/0:23,0:23:45.15:0,45,777	0/0:28,0:28:51.06:0,51,746	0/1:30,9:38:99:1062,0,112	0/0:27,0:27:63.22:0,63,1107	0/1:21,10:31:6.67:1079,0,7	1/1:13,8:21:36:690,36,0	0/0:28,0:28:75.26:0,75,1313	1/1:7,11:18:35.95:708,36,0	1/1:7,6:13:20.94:487,21,0	1/1:9,4:13:23.64:467,24,0	0/1:12,7:19:16.39:659,0,16	1/1:7,3:11:2.06:167,2,0	0/1:7,3:10:8:243,0,8	0/1:5,2:5:10.96:138,0,11	1/1:16,10:27:44.34:966,44,0	1/1:9,0:9:5.97:46,6,0	1/1:16,19:35:59.77:1365,60,0	0/0:18,0:18:45.09:0,45,679	0/0:35,1:36:90.25:0,90,1552	0/0:20,0:20:54.16:0,54,904	1/1:14,6:20:19.18:589,19,0	1/1:16,9:25:45.05:713,45,0	1/1:6,4:10:16.57:371,17,0
chr10	40420618	.	GAC	G	5728.99	PASS	AB=0.847;AC=32;AF=0.571;AN=56;BaseQRankSum=15.324;DP=693;FS=0.337;HRun=0;HaplotypeScore=234.4713;InbreedingCoeff=0.6668;MQ=50.48;MQ0=15;MQRankSum=-12.851;QD=16.80;ReadPosRankSum=-4.060;VQSLOD=3.9490;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,129,2271	1/1:11,5:16:25.23:193,25,0	0/0:51,0:18:17.75:0,18,461	0/0:82,0:29:0.14:0,0,344	1/1:14,4:18:30.41:286,30,0	0/0:20,0:20:51.15:0,51,933	0/0:25,0:25:54.05:0,54,897	0/1:32,2:32:99:396,0,134	0/0:24,0:24:69.24:0,69,1286	0/1:20,9:28:17.54:670,0,18	1/1:16,5:21:34.66:388,35,0	0/0:28,0:28:75.23:0,75,1456	1/1:11,8:19:40.71:390,41,0	1/1:10,3:13:19.71:184,20,0	1/1:10,7:17:30.49:302,30,0	0/1:9,8:17:12.36:338,0,12	1/1:9,1:10:14.46:117,14,0	1/1:7,2:9:8.25:180,8,0	0/1:10,0:6:5.34:70,0,5	1/1:13,13:26:40.97:395,41,0	1/1:11,0:11:8.95:71,9,0	1/1:28,6:33:61.36:633,61,0	0/0:18,0:18:51.10:0,51,846	0/0:35,0:35:90.25:0,90,1689	0/0:19,0:19:57.15:0,57,1016	1/1:14,6:20:30.14:361,30,0	1/1:14,11:25:46.93:530,47,0	1/1:6,6:12:13.69:224,14,0
chr10	40420626	.	AAG	A	996	PASS	AB=0.842;AC=16;AF=0.286;AN=56;BaseQRankSum=13.395;DP=698;FS=3.633;HRun=0;HaplotypeScore=245.5405;InbreedingCoeff=-0.2296;MQ=56.23;MQ0=18;MQRankSum=-11.782;QD=3.32;ReadPosRankSum=2.021;VQSLOD=2.7446;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:87.28:0,87,1456	0/1:6,10:17:6.42:139,0,6	0/0:52,0:23:32.65:0,33,460	0/0:80,0:24:16.66:0,17,200	0/0:12,7:19:1.04:0,1,36	0/0:22,0:22:54.18:0,54,916	0/0:22,0:22:57.19:0,57,945	0/1:17,3:19:77.25:77,0,89	0/0:25,0:25:72.25:0,72,1224	0/1:22,7:30:99:223,0,227	0/0:15,4:20:2.79:0,3,36	0/0:31,0:31:75.24:0,75,1314	0/1:18,6:24:99:124,0,101	0/1:10,3:13:13.93:36,0,14	0/1:17,1:18:7.32:7,0,34	0/1:19,2:21:46.22:46,0,132	0/1:10,1:11:20.91:27,0,21	0/1:6,2:9:22.99:37,0,23	0/1:10,2:6:50.41:50,0,70	0/1:21,8:30:51.51:52,0,120	0/0:9,0:9:2.84:0,3,14	0/1:24,11:34:13.48:13,0,34	0/0:16,0:16:36.12:0,36,615	0/0:29,1:30:69.21:0,69,1142	0/0:21,0:21:51.17:0,51,863	0/1:20,4:24:99:102,0,267	1/1:14,6:23:17.59:166,18,0	0/1:10,0:12:14.04:53,0,14
chr10	40420633	.	A	ACAGAGAGT	6604.82	PASS	AB=0.987;AC=26;AF=0.464;AN=56;BaseQRankSum=11.059;DP=696;FS=4.218;HRun=0;HaplotypeScore=257.8328;InbreedingCoeff=0.2778;MQ=57.49;MQ0=20;MQRankSum=-10.740;QD=19.31;ReadPosRankSum=2.250;VQSLOD=4.0997;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:90.27:0,90,2361	0/1:18,0:18:8.77:212,0,9	0/0:57,0:24:33.56:0,34,691	0/0:88,0:24:29.13:0,29,304	1/1:15,0:15:6.24:123,6,0	0/0:21,0:21:54.17:0,54,1391	0/0:21,0:21:60.19:0,60,1436	0/1:14,0:12:29.80:30,0,116	0/0:27,0:27:78.24:0,78,1988	0/1:34,0:33:99:1093,0,148	1/1:17,0:17:6.74:144,7,0	0/0:31,0:31:84.01:0,84,2175	1/1:20,3:23:45.06:892,45,0	1/1:12,2:14:12.15:153,12,0	1/1:16,1:17:21.35:440,21,0	0/1:17,3:20:10.53:976,0,11	1/1:11,0:11:17.98:403,18,0	0/1:11,0:11:16.24:351,0,16	0/1:13,0:8:19.03:72,0,19	0/1:30,0:30:34.95:35,0,49	0/1:10,0:10:18.91:19,0,19	1/1:30,6:35:17.32:208,17,0	0/0:13,0:13:36.12:0,36,924	0/0:30,0:31:72.20:0,72,1915	0/0:19,0:19:51.17:0,51,1244	0/1:25,0:25:44.02:385,0,44	1/1:24,0:24:19.05:654,19,0	0/1:10,0:10:7.07:414,0,7
chr10	40420732	.	GTGAC	G	932.82	PASS	AB=0.944;AC=13;AF=0.232;AN=56;BaseQRankSum=9.103;DP=670;FS=23.028;HRun=0;HaplotypeScore=161.7097;InbreedingCoeff=-0.3710;MQ=54.76;MQ0=61;MQRankSum=-3.794;QD=3.30;ReadPosRankSum=-5.052;VQSLOD=-0.5365;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:32,0:32:99:177,0,654	0/0:15,0:15:10.77:0,11,272	0/0:54,0:6:4.15:0,4,80	0/0:99,0:23:7.59:0,8,161	0/1:18,0:18:35.86:36,0,180	0/0:23,0:23:32.19:0,32,946	0/0:24,0:22:43.14:0,43,877	0/1:25,12:36:99:200,0,914	0/0:13,0:13:9.62:0,10,562	0/0:22,0:22:50.24:0,50,856	0/0:8,2:10:12.01:0,12,162	0/0:24,1:25:1.60:0,2,321	0/1:23,1:24:40.18:40,0,298	0/1:17,0:17:70.68:71,0,119	0/1:16,0:16:14.85:15,0,108	0/1:15,1:15:55.10:55,0,226	0/1:18,0:18:92.09:92,0,216	0/0:15,0:14:1.25:0,1,124	0/1:12,0:9:16.78:17,0,322	0/1:18,1:18:99:149,0,121	0/0:13,0:10:6.02:0,6,99	0/0:24,0:24:30.56:0,31,406	0/0:12,0:12:1.70:0,2,132	0/0:23,0:23:21.96:0,22,432	0/0:12,0:12:8.71:0,9,329	0/1:19,14:33:99:185,0,744	0/1:27,1:28:23.89:24,0,446	0/1:13,0:13:17.66:18,0,317
chr10	40420736	.	CAGAG	C	354.07	PASS	AB=0.970;AC=12;AF=0.231;AN=52;BaseQRankSum=0.886;DP=678;FS=2.111;HRun=0;HaplotypeScore=169.2708;InbreedingCoeff=0.3581;MQ=51.71;MQ0=60;MQRankSum=-0.952;QD=1.41;ReadPosRankSum=0.604;VQSLOD=2.8750;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:31,0:31:28.45:28,0,69	0/0:15,0:15:3.46:0,3,24	./.	0/1:92,0:19:0:0,0,0	0/0:24,0:24:0.94:0,1,43	0/0:23,0:23:27.07:0,27,546	0/1:21,0:22:1.11:1,0,395	0/0:35,0:34:34.53:0,35,244	0/0:12,0:13:23.80:0,24,462	0/0:24,0:24:24.61:0,25,272	./.	1/1:12,13:26:5.66:205,6,0	0/0:27,0:27:10.65:0,11,65	0/0:18,0:18:2.56:0,3,26	0/0:15,0:15:5.26:0,5,49	0/0:19,0:18:14.74:0,15,136	0/0:18,0:18:14.47:0,14,138	0/0:15,0:14:6.01:0,6,76	0/0:15,0:12:13.84:0,14,145	0/1:19,0:18:12.39:12,0,29	0/0:15,0:12:2.98:0,3,25	1/1:23,0:23:1.63:4,2,0	1/1:6,6:12:6.02:95,6,0	1/1:11,11:23:3.84:135,4,0	0/0:7,0:15:17.65:0,18,129	0/0:32,0:32:32.83:0,33,286	0/0:33,0:33:21.23:0,21,169	0/0:13,0:13:14.70:0,15,151
chr10	40420756	.	G	GAGAGAGAGTGAT	5297.56	PASS	AB=0.952;AC=19;AF=0.339;AN=56;BaseQRankSum=-1.556;DP=637;FS=7.248;HRun=0;HaplotypeScore=200.0453;InbreedingCoeff=0.2786;MQ=43.41;MQ0=49;MQRankSum=-3.390;QD=17.26;ReadPosRankSum=-0.637;VQSLOD=3.0027;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:24:7.34:7,0,223	1/1:15,0:15:16.28:229,16,0	0/0:36,0:5:13.58:0,14,159	0/0:58,0:6:12.04:0,12,192	0/0:26,0:26:25.37:0,25,248	0/0:21,0:21:44.05:0,44,970	0/0:25,0:23:47.65:0,48,968	0/1:37,0:36:23.48:932,0,23	0/0:15,0:15:38.19:0,38,877	1/1:13,0:27:63.76:1042,64,0	1/1:7,0:7:6:75,6,0	0/0:28,0:28:39.11:0,39,709	0/1:22,0:22:0.41:0,0,200	0/0:21,0:21:13.47:0,13,414	0/0:14,0:14:7.02:0,7,30	0/0:19,0:18:26.82:0,27,273	0/0:16,0:16:24.28:0,24,249	1/1:1,15:19:6.02:287,6,0	0/1:19,0:17:17.93:482,0,18	0/1:25,0:25:5.95:638,0,6	1/1:16,0:13:5.60:73,6,0	0/0:21,0:21:11.93:0,12,123	0/0:11,0:9:9.03:0,9,225	0/0:17,0:17:15.03:0,15,316	0/1:14,0:14:1.56:2,0,110	0/1:26,0:26:99:919,0,105	0/1:37,0:37:54.65:520,0,55	0/1:7,0:16:12.59:90,0,13
chr10	40422518	.	TCCCACAGACCCCAG	T	13456.02	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=15.977;DP=642;FS=0.000;HRun=0;HaplotypeScore=260.2097;InbreedingCoeff=0.9914;MQ=82.65;MQ0=0;MQRankSum=-15.811;QD=96.81;ReadPosRankSum=1.694;VQSLOD=4.2701;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,135,9250	0/0:5,0:5:15.05:0,15,959	0/0:23,0:23:60.96:0,61,3677	0/0:23,0:22:54.13:0,54,2483	1/1:6,20:26:57.20:2032,57,0	0/0:30,0:30:90.30:0,90,5947	0/0:25,0:25:73.13:0,73,4789	0/0:28,0:28:72.25:0,72,4572	0/0:19,0:19:57.20:0,57,3925	0/0:19,0:19:57.18:0,57,3761	0/0:15,0:15:45.15:0,45,2776	0/0:37,0:37:99:0,111,7416	1/1:1,14:15:36.12:1521,36,0	1/1:5,13:18:36.12:1521,36,0	1/1:1,28:29:78.27:3296,78,0	1/1:1,24:25:63.69:2663,64,0	1/1:0,6:6:12.04:377,12,0	0/0:35,0:35:99:0,99,6155	0/0:17,0:17:51.18:0,51,3380	0/0:18,0:18:48.15:0,48,3112	0/0:38,0:38:99:0,105,6853	1/1:4,16:20:51.18:2045,51,0	0/0:18,0:18:42.14:0,42,2578	0/0:26,0:26:78.27:0,78,4888	0/0:20,0:20:60.19:0,60,3946	0/0:17,0:17:51.18:0,51,3283	0/0:25,0:25:72.23:0,72,4833	0/0:15,0:15:45.15:0,45,3163
chr10	40423830	.	GCCTTGAACTCACTATGTAGCCAAGGCTGA	G	3688.53	PASS	AC=8;AF=0.148;AN=54;BaseQRankSum=6.547;DP=476;FS=3.304;HRun=0;HaplotypeScore=356.2774;InbreedingCoeff=0.9013;MQ=67.77;MQ0=0;MQRankSum=-6.372;QD=75.28;ReadPosRankSum=4.068;VQSLOD=1.8294;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:87.26:0,87,9107	0/0:10,0:10:27.09:0,27,2494	0/0:22,0:18:30.10:0,30,2004	0/0:26,0:22:48.16:0,48,2643	1/1:7,5:12:6.02:302,6,0	0/0:13,0:13:36.11:0,36,2930	0/0:13,0:13:33.11:0,33,3254	0/0:45,0:45:99:0,120,9141	0/0:17,0:17:39.12:0,39,4144	0/0:8,0:8:24.08:0,24,1985	0/0:18,0:18:36.12:0,36,2734	0/0:14,0:14:36.11:0,36,2815	0/0:11,0:11:24.08:0,24,2019	0/0:21,0:21:48.16:0,48,4556	1/1:6,2:8:9.03:521,9,0	1/1:9,13:21:33.11:2498,33,0	1/1:5,2:7:6.02:368,6,0	0/0:22,0:22:66.23:0,66,6987	0/0:13,0:13:30.10:0,30,2148	0/0:11,0:11:27.08:0,27,2073	0/0:21,0:21:51.17:0,51,5410	./.	0/0:3,0:3:9.03:0,9,565	0/0:40,0:40:99:0,108,12510	0/0:14,0:14:30.10:0,30,3598	0/0:23,0:23:57.20:0,57,5807	0/0:20,0:20:51.18:0,51,4077	0/0:9,0:9:21.07:0,21,2209
chr10	40423946	.	CT	C	2278.07	PASS	AB=0.900;AC=27;AF=0.482;AN=56;BaseQRankSum=5.009;DP=473;FS=10.463;HRun=12;HaplotypeScore=77.7533;InbreedingCoeff=0.8587;MQ=74.19;MQ0=4;MQRankSum=0.997;QD=10.85;ReadPosRankSum=3.846;VQSLOD=2.3609;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,21:27:58.49:440,58,0	0/0:5,0:5:8.51:0,9,116	0/0:20,1:14:2.47:0,2,154	0/0:17,2:15:11.24:0,11,74	1/1:2,20:22:59.31:444,59,0	1/1:2,0:14:22.39:65,22,0	1/1:2,0:6:8.15:24,8,0	0/0:43,1:43:78.51:0,79,914	1/1:3,0:12:14.25:41,14,0	0/0:25,0:25:54.08:0,54,539	0/0:22,0:22:55.31:0,55,528	1/1:1,0:16:28.52:82,29,0	0/0:10,0:10:9.02:0,9,91	0/1:8,1:9:2.19:2,0,162	1/1:5,13:18:32.77:250,33,0	1/1:7,9:16:32.54:242,33,0	1/1:4,24:27:35.26:451,35,0	0/0:19,2:21:18.79:0,19,355	0/0:14,0:13:12.02:0,12,122	0/0:9,1:11:5.44:0,5,206	0/0:11,0:11:12.01:0,12,110	1/1:3,3:6:8.96:70,9,0	1/1:1,0:12:22.40:65,22,0	1/1:1,0:8:14.26:41,14,0	1/1:4,12:16:35.85:278,36,0	0/0:22,0:22:47.98:0,48,467	0/0:20,0:20:41.99:0,42,399	0/0:16,0:17:29.89:0,30,288
chr10	40425296	.	GTCCATCCATCCA	G	10816.83	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-6.069;DP=921;FS=10.765;HRun=0;HaplotypeScore=351.6479;InbreedingCoeff=0.9378;MQ=54.16;MQ0=9;MQRankSum=-6.803;QD=28.62;ReadPosRankSum=-3.595;VQSLOD=2.3610;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:23,19:42:38.05:899,38,0	1/1:1,7:8:21.07:521,21,0	0/0:43,0:29:15.05:0,15,387	0/0:55,0:32:12.51:0,13,334	0/0:14,0:31:37.22:0,37,750	0/0:11,0:26:48.16:0,48,1049	0/0:24,0:34:35.92:0,36,781	1/1:17,13:30:36.01:555,36,0	0/0:8,0:27:54.17:0,54,1073	1/1:19,28:47:75.18:2035,75,0	1/1:9,12:21:20.29:351,20,0	0/0:16,0:39:87.29:0,87,1849	0/0:10,0:30:8.56:0,9,174	0/0:11,0:31:8.70:0,9,224	0/0:22,0:51:81.28:0,81,3786	0/0:20,0:51:96.14:0,96,4300	0/0:12,0:37:69.24:0,69,3154	1/1:16,12:28:8.40:410,8,0	1/1:12,19:31:52.35:1373,52,0	1/1:7,12:19:24.07:362,24,0	1/1:34,18:52:12.03:299,12,0	0/0:23,0:26:33.58:0,34,1228	0/0:10,0:24:45.12:0,45,881	0/0:18,0:38:63.22:0,63,1360	1/1:8,23:31:53.79:1127,54,0	1/1:12,18:31:54.17:1554,54,0	1/1:7,23:30:39.13:1228,39,0	1/1:6,2:8:3.01:104,3,0
chr10	40426457	.	CT	C	1707.60	PASS	AB=0.731;AC=27;AF=0.482;AN=56;BaseQRankSum=0.908;DP=559;FS=10.738;HRun=15;HaplotypeScore=67.6572;InbreedingCoeff=0.2927;MQ=71.70;MQ0=2;MQRankSum=0.010;QD=5.13;ReadPosRankSum=3.871;VQSLOD=1.4248;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,2:45:40.12:0,40,564	1/1:2,5:7:5.73:38,6,0	0/1:22,0:17:18.25:18,0,65	0/0:12,0:10:9.32:0,9,63	0/0:14,0:20:22.25:0,22,146	1/1:5,12:18:30.59:185,31,0	1/1:4,14:20:9.30:176,9,0	0/1:19,16:37:47.57:208,0,48	0/1:14,8:23:31.68:66,0,32	1/1:8,13:21:29.38:192,29,0	0/0:6,3:9:0.89:0,1,2	1/1:7,11:19:13.39:82,13,0	0/0:15,0:15:24.36:0,24,190	0/1:13,2:15:14.91:15,0,143	0/0:9,0:22:16.67:0,17,135	0/0:10,0:22:23.46:0,23,163	0/0:10,0:32:49.23:0,49,274	1/1:4,8:12:19.73:121,20,0	0/1:14,8:22:25.10:93,0,25	0/1:4,5:10:43.66:44,0,59	0/1:10,7:18:12.25:62,0,12	0/0:7,0:24:39.32:0,39,229	0/1:3,11:14:8.63:78,0,9	1/1:6,12:24:42.62:241,43,0	0/0:18,0:25:8.79:0,9,232	0/1:13,8:22:26.51:87,0,27	1/1:8,10:21:27.54:165,28,0	1/1:6,1:7:6.98:31,7,0
chr10	40427541	.	G	GT	9931.52	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=1.590;DP=805;FS=11.050;HRun=1;HaplotypeScore=86.2210;InbreedingCoeff=0.9998;MQ=79.78;MQ0=0;MQRankSum=-4.041;QD=38.79;ReadPosRankSum=4.506;VQSLOD=4.6978;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,51:54:99:2198,147,0	0/0:11,0:11:33.11:0,33,428	0/0:28,0:28:83.07:0,83,1031	0/0:31,0:31:83.58:0,84,977	0/0:19,0:19:54.18:0,54,698	1/1:0,23:23:57.19:854,57,0	1/1:2,36:38:99:1529,102,0	0/0:37,0:37:99:0,105,1336	1/1:3,31:34:81.27:1214,81,0	0/0:30,0:30:90.28:0,90,1155	0/0:11,0:11:30.10:0,30,389	1/1:1,29:30:81.27:1214,81,0	0/0:29,0:29:87.26:0,87,1112	0/0:35,0:35:99:0,102,1305	0/0:31,0:31:90.27:0,90,1150	0/0:27,0:27:56.31:0,56,928	0/0:38,0:38:99:0,108,1353	0/0:28,0:28:81.24:0,81,1035	0/0:28,0:28:81.26:0,81,1049	0/0:13,0:13:33.09:0,33,414	0/0:69,0:69:99:0,196,2516	0/0:17,0:17:45.15:0,45,584	1/1:0,17:17:45.15:674,45,0	1/1:1,38:39:93.32:1394,93,0	1/1:0,21:21:57.19:854,57,0	0/0:26,0:26:78.25:0,78,998	0/0:24,0:24:72.22:0,72,917	0/0:17,0:17:51.14:0,51,646
chr10	40427800	.	TA	T	6450.18	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=19.315;DP=701;FS=10.893;HRun=4;HaplotypeScore=109.2399;InbreedingCoeff=0.9998;MQ=65.58;MQ0=0;MQRankSum=-1.973;QD=31.31;ReadPosRankSum=4.330;VQSLOD=3.9554;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,39:40:99:1258,108,0	0/0:10,0:10:27.08:0,27,361	0/0:13,0:12:33.10:0,33,430	0/0:19,0:17:44.29:0,44,603	0/0:28,0:28:78.22:0,78,1039	1/1:2,20:22:57.10:648,57,0	1/1:0,21:21:57.17:684,57,0	0/0:42,0:42:99:0,117,1555	1/1:0,24:24:72.18:845,72,0	0/0:36,0:36:93.30:0,93,1283	0/0:13,0:13:39.09:0,39,524	1/1:1,20:21:57.17:680,57,0	0/0:28,0:28:81.25:0,81,1102	0/0:17,0:17:51.17:0,51,714	0/0:38,0:38:99:0,108,1497	0/0:26,0:26:72.23:0,72,991	0/0:29,0:29:87.24:0,87,1174	0/0:27,0:26:81.27:0,81,1131	0/0:22,0:22:57.17:0,57,754	0/0:18,0:18:54.18:0,54,755	0/0:28,0:28:81.22:0,81,1079	0/0:28,0:28:84.25:0,84,1123	1/1:1,24:25:57.17:683,57,0	1/1:0,24:24:60.18:717,60,0	1/1:0,29:29:78.24:935,78,0	0/0:35,0:35:99:0,99,1363	0/0:17,0:17:48.16:0,48,672	0/0:21,0:21:63.14:0,63,809
chr10	40429536	.	CA	C	835.73	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=0.506;DP=401;FS=6.386;HRun=1;HaplotypeScore=64.1425;InbreedingCoeff=0.4606;MQ=82.12;MQ0=1;MQRankSum=-1.847;QD=4.42;ReadPosRankSum=6.229;VQSLOD=0.5872;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:39.84:0,40,152	0/0:3,0:3:5.46:0,5,29	0/0:6,0:6:15.01:0,15,152	0/0:24,0:22:45.69:0,46,506	0/1:6,0:6:0.01:0,0,93	1/1:16,0:16:4.65:60,5,0	0/1:26,0:27:65.25:101,0,65	0/0:10,0:10:27.75:0,28,161	1/1:26,1:27:10.31:178,10,0	0/0:7,0:7:11.66:0,12,57	0/0:7,0:7:10.94:0,11,67	1/1:35,2:37:3.88:231,4,0	0/1:11,0:11:19.13:19,0,129	0/0:13,0:13:5.70:0,6,258	0/0:5,0:5:12.01:0,12,147	0/0:11,0:11:32.91:0,33,314	0/0:13,0:12:35.80:0,36,302	0/0:15,0:14:20.27:0,20,80	0/1:4,0:4:1.91:2,0,11	0/0:5,0:5:14.09:0,14,105	0/0:16,0:16:24.34:0,24,151	0/0:8,0:8:6.04:0,6,149	1/1:13,1:14:31.75:145,32,0	1/1:35,1:36:65.33:253,65,0	0/0:15,0:15:23.71:0,24,81	0/1:11,0:11:11.02:11,0,67	0/0:15,0:15:24.15:0,24,130	0/0:8,0:8:2.60:0,3,10
chr10	40429537	.	AC	A	3782.20	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-2.604;DP=409;FS=1.529;HRun=7;HaplotypeScore=57.8722;InbreedingCoeff=0.8734;MQ=80.90;MQ0=1;MQRankSum=-1.369;QD=18.72;ReadPosRankSum=6.467;VQSLOD=3.2486;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,0:30:48.89:143,49,0	0/0:1,0:3:2.84:0,3,14	0/0:6,0:6:6.02:0,6,76	0/0:23,0:21:39.80:0,40,474	0/0:6,0:6:12.01:0,12,125	1/1:2,13:15:33.07:337,33,0	1/1:6,21:27:50.70:520,51,0	0/0:5,0:12:26.02:0,26,160	1/1:4,24:28:60.13:611,60,0	0/0:3,0:10:11.74:0,12,59	0/0:4,0:6:5.68:0,6,29	1/1:3,34:37:78.15:787,78,0	0/0:11,0:11:24.02:0,24,250	0/0:14,0:14:33.03:0,33,360	0/0:5,0:5:15.03:0,15,166	0/0:10,0:10:21.02:0,21,245	0/0:11,0:11:27.06:0,27,311	0/0:1,0:14:20.07:0,20,106	0/0:1,0:5:10.59:0,11,50	0/0:3,0:5:8.68:0,9,54	0/0:5,0:19:16.95:0,17,92	0/0:8,0:8:14.94:0,15,166	1/1:1,13:14:39.09:397,39,0	1/1:3,33:36:90.20:917,90,0	1/1:1,0:15:24.44:72,24,0	0/0:5,0:14:24.22:0,24,147	0/0:4,0:14:20.17:0,20,112	0/0:0,0:10:2.84:0,3,14
chr10	40429718	.	C	CCG	16378.04	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=18.215;DP=733;FS=11.827;HRun=0;HaplotypeScore=133.5029;InbreedingCoeff=0.9969;MQ=89.17;MQ0=0;MQRankSum=-4.920;QD=42.76;ReadPosRankSum=6.938;VQSLOD=5.4852;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,60:64:99:2913,165,0	0/0:9,0:9:27.09:0,27,435	0/0:28,0:28:81.16:0,81,1202	0/0:30,0:30:78.70:0,79,1199	1/1:1,17:18:32.90:586,33,0	1/1:0,21:22:51.17:921,51,0	1/1:1,29:33:68.97:1194,69,0	0/0:27,0:27:77.28:0,77,1185	1/1:0,34:35:99:1786,99,0	0/0:25,0:25:63.20:0,63,984	0/0:12,0:12:26.76:0,27,402	1/1:0,37:39:99:1829,102,0	0/0:26,0:26:78.22:0,78,1198	0/0:35,0:35:99:0,99,1613	1/1:0,28:29:66.23:1225,66,0	1/1:0,28:29:78.27:1444,78,0	1/1:0,30:31:75.26:1363,75,0	0/0:14,0:14:42.08:0,42,631	0/0:27,0:27:75.24:0,75,1190	0/0:18,0:18:51.16:0,51,808	0/0:57,0:57:99:0,168,2629	1/1:0,13:14:21.07:386,21,0	1/1:1,14:17:36.07:637,36,0	1/1:1,31:33:69.23:1263,69,0	1/1:0,18:19:48.16:831,48,0	0/0:15,0:15:36.08:0,36,517	0/0:22,0:22:63.20:0,63,1003	0/0:5,0:5:15.03:0,15,220
chr10	40431814	.	G	GT	12670.33	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-10.625;DP=576;FS=4.314;HRun=1;HaplotypeScore=52.0456;InbreedingCoeff=0.9656;MQ=53.83;MQ0=15;MQRankSum=4.705;QD=38.39;ReadPosRankSum=0.470;VQSLOD=5.1537;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,49:50:99:1924,129,0	0/0:10,0:10:24.08:0,24,305	0/0:2,0:1:3.01:0,3,39	0/0:8,0:6:15.05:0,15,195	1/1:3,19:21:51.13:739,51,0	1/1:1,21:20:51.17:764,51,0	1/1:1,13:13:36.12:539,36,0	0/0:20,0:20:57.18:0,57,728	1/1:2,17:19:48.16:719,48,0	0/0:26,0:23:69.22:0,69,894	0/0:21,0:21:60.19:0,60,779	1/1:1,22:23:57.19:854,57,0	0/0:14,0:14:42.14:0,42,545	0/0:14,0:14:39.07:0,39,486	1/1:0,24:24:72.24:1079,72,0	1/1:1,23:24:66.22:989,66,0	1/1:5,32:34:54.41:1285,54,0	0/0:27,0:26:75.21:0,75,953	0/0:12,0:11:30.01:0,30,338	0/0:24,0:23:66.20:0,66,842	0/0:23,0:22:60.20:0,60,779	1/1:2,28:29:81.27:1214,81,0	1/1:4,20:22:60.17:875,60,0	1/1:0,25:25:75.25:1107,75,0	1/1:0,16:16:39.13:585,39,0	0/0:24,0:23:66.21:0,66,857	0/0:18,0:18:54.16:0,54,687	0/0:3,0:3:9.01:0,9,101
chr10	40432008	.	CAA	C	1062.07	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.520;DP=530;FS=3.198;HRun=3;HaplotypeScore=73.4631;InbreedingCoeff=0.9894;MQ=88.04;MQ0=0;MQRankSum=-3.026;QD=27.23;ReadPosRankSum=0.686;VQSLOD=2.6730;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,26:27:78.17:901,78,0	0/0:10,0:10:30.10:0,30,580	0/0:25,0:25:71.91:0,72,1282	0/0:17,0:17:51.14:0,51,923	0/0:32,0:32:96.31:0,96,1821	0/0:24,0:24:72.20:0,72,1335	0/0:28,0:28:84.29:0,84,1586	0/0:35,0:35:99:0,99,1883	0/0:14,0:14:42.14:0,42,793	0/0:14,0:14:42.14:0,42,799	0/0:15,0:15:45.15:0,45,866	0/0:13,0:13:33.08:0,33,600	0/0:10,0:10:27.09:0,27,342	0/0:7,0:7:21.07:0,21,288	0/0:20,0:20:60.21:0,60,1127	0/0:14,0:14:42.14:0,42,811	0/0:35,0:35:99:0,102,1938	0/0:19,0:19:54.10:0,54,967	0/0:16,0:16:48.16:0,48,920	0/0:21,0:21:60.21:0,60,1159	0/0:26,0:26:75.26:0,75,1440	0/0:19,0:19:57.17:0,57,1002	0/0:20,0:20:60.19:0,60,1127	0/0:10,0:10:30.10:0,30,580	1/1:2,9:12:19.27:281,19,0	0/0:19,0:19:57.15:0,57,1064	0/0:22,0:22:66.19:0,66,1160	0/0:6,0:6:18.06:0,18,348
chr10	40432012	.	C	CT	1052.17	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.841;DP=530;FS=3.100;HRun=0;HaplotypeScore=63.1488;InbreedingCoeff=0.9910;MQ=87.65;MQ0=0;MQRankSum=-1.962;QD=28.44;ReadPosRankSum=0.208;VQSLOD=3.6671;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,26:27:78.15:882,78,0	0/0:10,0:10:30.10:0,30,420	0/0:26,0:26:72.19:0,72,936	0/0:16,0:16:36.16:0,36,605	0/0:32,0:32:96.32:0,96,1340	0/0:24,0:24:69.23:0,69,958	0/0:29,0:29:87.28:0,87,1185	0/0:37,0:37:99:0,99,1383	0/0:14,0:14:42.14:0,42,578	0/0:15,0:15:45.14:0,45,612	0/0:16,0:16:48.16:0,48,666	0/0:12,0:12:30.10:0,30,419	0/0:9,0:9:22.95:0,23,291	0/0:7,0:7:21.07:0,21,262	0/0:20,0:20:60.20:0,60,824	0/0:15,0:15:42.14:0,42,587	0/0:35,0:35:99:0,102,1423	0/0:19,0:19:48.16:0,48,671	0/0:17,0:17:48.16:0,48,671	0/0:22,0:22:60.20:0,60,839	0/0:26,0:26:75.25:0,75,1048	0/0:18,0:18:54.18:0,54,753	0/0:19,0:19:57.17:0,57,779	0/0:10,0:10:30.10:0,30,420	1/1:1,9:10:26.73:291,27,0	0/0:20,0:20:54.18:0,54,755	0/0:19,0:19:57.19:0,57,790	0/0:6,0:6:18.06:0,18,252
chr10	40433137	.	CCT	C	724.74	PASS	AB=0.977;AC=12;AF=0.214;AN=56;BaseQRankSum=-2.989;DP=596;FS=7.729;HRun=0;HaplotypeScore=155.3493;InbreedingCoeff=-0.0115;MQ=72.52;MQ0=0;MQRankSum=-0.822;QD=3.36;ReadPosRankSum=-4.051;VQSLOD=1.0386;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:26:32.47:142,0,32	0/0:13,0:13:29.27:0,29,297	0/0:28,0:25:53.21:0,53,730	0/0:23,0:22:48.02:0,48,643	0/1:22,0:22:13.12:75,0,13	0/0:20,0:19:11.16:0,11,347	0/1:30,1:31:99:134,0,391	0/0:35,0:35:99:0,99,1119	0/1:20,1:21:14.20:14,0,363	0/0:24,0:24:63.12:0,63,710	0/0:11,0:11:24.06:0,24,309	0/0:23,0:23:9.86:0,10,380	0/1:16,0:16:19.95:61,0,20	1/1:17,0:16:16.28:159,16,0	0/0:25,0:25:19.12:0,19,67	0/0:23,0:23:22.95:0,23,84	0/1:12,0:12:3.81:126,0,4	0/0:17,0:17:42.06:0,42,482	0/0:26,0:26:78.15:0,78,921	0/0:21,0:21:51.56:0,52,567	0/0:41,0:41:99:0,105,1207	0/1:17,0:16:20.69:32,0,21	0/1:23,1:24:69.91:70,0,366	0/1:14,2:16:40.25:40,0,287	0/1:14,0:14:27.11:27,0,37	0/0:19,0:19:57.09:0,57,610	0/0:21,0:21:54.08:0,54,604	0/0:9,0:9:27.01:0,27,282
chr10	40433138	.	C	CTGTGTGTGTGTG	6260	PASS	AB=1.000;AC=22;AF=0.393;AN=56;BaseQRankSum=-1.041;DP=596;FS=2.733;HRun=0;HaplotypeScore=248.2226;InbreedingCoeff=0.6731;MQ=72.63;MQ0=0;MQRankSum=-7.120;QD=24.26;ReadPosRankSum=-2.981;VQSLOD=3.4978;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:24:31.85:610,32,0	0/1:13,0:13:55.51:56,0,496	0/0:28,0:25:48.23:0,48,1217	0/0:25,0:23:45.08:0,45,1080	1/1:16,6:22:11.96:249,12,0	0/1:20,0:19:8.76:9,0,1203	0/1:30,0:30:22.54:23,0,1571	0/0:34,0:34:96.36:0,96,1668	0/0:23,0:23:48.02:0,48,1485	0/0:22,0:22:63.18:0,63,1256	0/0:12,0:12:27.04:0,27,569	0/0:22,0:22:3.65:0,4,1289	1/1:14,0:14:11.87:85,12,0	1/1:17,0:16:14.95:138,15,0	1/1:7,14:25:17.88:1107,18,0	1/1:3,18:23:33.11:1890,33,0	1/1:11,1:12:20.46:774,20,0	0/0:16,0:16:42.07:0,42,905	0/0:26,0:26:75.85:0,76,1353	0/0:21,0:21:51.11:0,51,1011	0/0:44,0:44:99:0,105,2199	1/1:6,9:19:13.84:721,14,0	0/1:24,0:24:13.28:13,0,1280	0/0:16,0:16:48.15:0,48,1270	1/1:7,0:14:25.31:585,25,0	0/0:19,0:19:57.17:0,57,1187	0/0:21,0:21:54.13:0,54,1113	0/0:9,0:9:24.08:0,24,518
chr10	40433140	.	C	CTG	7701.18	PASS	AB=0.688;AC=38;AF=0.679;AN=56;BaseQRankSum=-6.750;DP=660;FS=5.083;HRun=0;HaplotypeScore=172.4910;InbreedingCoeff=0.5953;MQ=68.70;MQ0=1;MQRankSum=-6.078;QD=15.75;ReadPosRankSum=-0.003;VQSLOD=4.6970;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:33,0:33:26.73:232,27,0	1/1:4,10:14:21:313,21,0	0/0:28,0:25:29.80:0,30,314	0/0:26,0:24:34.40:0,34,389	1/1:25,0:25:11.05:59,11,0	0/1:21,0:20:17.27:17,0,238	0/0:31,0:31:57.04:0,57,374	1/1:17,17:35:15.22:722,15,0	0/0:23,0:23:9.86:0,10,287	1/1:7,18:26:30.36:712,30,0	0/1:4,9:14:17.87:222,0,18	0/0:24,0:24:4.18:0,4,254	1/1:17,0:17:5.99:48,6,0	1/1:22,0:21:8.99:92,9,0	1/1:33,0:34:20.99:184,21,0	1/1:30,0:30:38.80:333,39,0	1/1:16,0:16:6:52,6,0	0/1:3,13:16:2.84:447,0,3	1/1:12,17:29:51.09:733,51,0	0/1:8,13:21:18.49:488,0,18	1/1:11,35:47:45.84:1210,46,0	1/1:19,0:18:15:131,15,0	0/0:23,0:23:31.28:0,31,297	0/0:16,0:16:47.29:0,47,308	1/1:21,0:21:27.01:252,27,0	1/1:6,12:19:39.13:611,39,0	1/1:6,14:20:3.18:539,3,0	1/1:2,7:9:20.99:305,21,0
chr10	40433892	.	ACC	A	7803.14	PASS	AB=0.981;AC=31;AF=0.554;AN=56;BaseQRankSum=1.454;DP=682;FS=7.846;HRun=6;HaplotypeScore=143.5123;InbreedingCoeff=0.6353;MQ=70.08;MQ0=0;MQRankSum=-1.570;QD=18.58;ReadPosRankSum=3.596;VQSLOD=1.8723;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:21:35.26:0,35,826	1/1:0,9:9:24.08:318,24,0	0/0:33,0:28:61.02:0,61,744	0/0:23,0:17:31.66:0,32,353	0/1:22,0:22:30.22:30,0,186	0/0:20,0:20:43.09:0,43,771	0/0:38,0:38:99:0,107,1596	1/1:7,22:29:65.97:698,66,0	0/0:25,0:25:66.09:0,66,946	1/1:3,19:22:50.97:560,51,0	1/1:0,7:7:12.04:159,12,0	0/0:26,0:26:68.49:0,68,1161	1/1:4,17:21:47.12:651,47,0	1/1:1,33:34:66.22:877,66,0	0/1:28,2:30:47.59:48,0,214	0/1:30,1:31:81.59:82,0,187	0/1:31,0:31:13.18:13,0,221	1/1:1,17:18:36.12:478,36,0	1/1:4,8:12:24.03:285,24,0	1/1:1,17:18:30.09:399,30,0	1/1:3,46:49:97.99:1314,98,0	0/1:24,0:24:74.44:74,0,173	0/0:16,0:16:45.05:0,45,734	0/0:40,0:40:78.68:0,79,1643	0/0:18,0:18:48.04:0,48,681	1/1:1,19:20:54.10:664,54,0	1/1:4,25:29:72.23:955,72,0	1/1:0,14:14:15.05:198,15,0
chr10	40435417	.	GA	G	4423.29	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=17.071;DP=678;FS=1.050;HRun=10;HaplotypeScore=99.6896;InbreedingCoeff=0.9552;MQ=79.13;MQ0=0;MQRankSum=-3.049;QD=20.77;ReadPosRankSum=4.979;VQSLOD=4.8633;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,39:44:46.12:777,46,0	0/0:10,0:11:32.92:0,33,346	0/0:21,0:21:32.86:0,33,321	0/0:14,1:16:0.62:0,1,173	1/1:2,25:27:74.98:651,75,0	0/0:29,0:29:84.23:0,84,929	0/0:14,1:15:18.72:0,19,392	0/0:36,1:37:52.13:0,52,775	0/0:22,0:22:60.11:0,60,635	0/0:28,1:29:39.94:0,40,638	0/0:20,1:23:50.97:0,51,545	0/0:28,0:28:72.19:0,72,796	0/0:14,0:14:39.09:0,39,423	0/0:17,0:18:47.96:0,48,512	1/1:2,26:28:71.98:625,72,0	1/1:0,38:38:95.98:834,96,0	1/1:5,29:34:83.97:729,84,0	0/0:16,0:16:33.08:0,33,357	0/0:25,0:25:59.74:0,60,634	0/0:27,0:29:81:0,81,856	0/0:19,0:19:48.10:0,48,513	1/1:4,15:19:32.96:286,33,0	0/0:21,1:22:37.12:0,37,638	0/0:14,0:14:30.07:0,30,325	1/1:0,23:23:59.99:521,60,0	0/0:27,0:27:72.19:0,72,790	0/0:31,0:31:78.19:0,78,854	0/0:18,0:18:51.14:0,51,564
chr10	40436977	.	TTTTTGTTTTG	T	4451.76	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=9.874;DP=638;FS=0.000;HRun=0;HaplotypeScore=198.7016;InbreedingCoeff=0.9693;MQ=64.53;MQ0=3;MQRankSum=-9.119;QD=40.47;ReadPosRankSum=-0.472;VQSLOD=4.0007;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:27:45.13:0,45,1571	0/0:8,0:8:15.05:0,15,670	0/0:29,0:24:35.99:0,36,1294	0/0:16,0:12:15.05:0,15,467	0/0:32,0:40:99:0,99,3401	1/1:6,15:21:42.10:1208,42,0	1/1:7,12:19:33.11:1005,33,0	0/0:33,0:33:63.21:0,63,2807	1/1:4,13:17:21.07:606,21,0	0/0:38,0:38:93.28:0,93,4175	0/0:21,0:21:54.17:0,54,2468	1/1:10,12:22:30.10:862,30,0	0/0:25,0:25:54.18:0,54,2508	0/0:18,0:18:51.17:0,51,2437	0/0:16,0:23:51.17:0,51,1983	0/0:20,0:28:69.22:0,69,2565	0/0:18,0:18:24.08:0,24,855	0/0:30,0:30:84.29:0,84,3939	0/0:22,0:22:36.11:0,36,1530	0/0:20,0:20:57.20:0,57,2809	0/0:10,0:10:24.08:0,24,1067	0/0:12,0:14:39.12:0,39,1486	1/1:6,12:18:23.62:587,24,0	1/1:8,5:13:6.02:183,6,0	0/0:31,0:40:96.32:0,96,3735	0/0:34,0:34:66.22:0,66,3006	0/0:12,0:12:24.08:0,24,1100	0/0:22,0:22:54.11:0,54,2329
chr10	40437203	.	CT	C	2249.84	PASS	AB=0.828;AC=16;AF=0.286;AN=56;BaseQRankSum=4.588;DP=632;FS=0.384;HRun=13;HaplotypeScore=94.1236;InbreedingCoeff=0.6335;MQ=68.01;MQ0=0;MQRankSum=1.142;QD=9.53;ReadPosRankSum=4.191;VQSLOD=3.1931;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,28:35:71.54:525,72,0	0/0:7,0:7:15.02:0,15,146	0/1:20,2:19:12.34:12,0,189	0/1:14,0:9:4:4,0,108	1/1:5,20:25:8.38:323,8,0	0/0:18,0:19:29.05:0,29,300	0/0:27,5:32:3.37:0,3,494	0/0:35,2:37:1.31:0,1,322	0/0:14,1:15:9.36:0,9,230	0/0:31,0:31:41.96:0,42,392	0/0:18,0:18:36.04:0,36,341	0/0:18,0:18:33.02:0,33,303	0/0:9,0:23:25.93:0,26,146	0/0:16,0:18:30.54:0,31,192	1/1:4,25:29:65.57:482,66,0	1/1:5,14:20:40.72:290,41,0	0/1:10,24:34:0.04:297,0,0	0/0:24,0:24:32.17:0,32,460	0/0:13,0:14:29.85:0,30,261	0/0:21,0:22:38.07:0,38,378	0/0:28,1:29:44.07:0,44,559	1/1:4,5:9:14.86:109,15,0	0/1:16,5:21:20.69:21,0,288	0/0:20,1:21:29.20:0,29,445	1/1:3,23:27:50.66:372,51,0	0/0:32,0:33:50.07:0,50,500	0/0:21,1:23:22.37:0,22,367	0/0:11,1:12:7.85:0,8,213
chr10	40438482	.	AG	A	1339.47	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.519;DP=686;FS=14.262;HRun=5;HaplotypeScore=65.8050;InbreedingCoeff=0.9756;MQ=85.23;MQ0=0;MQRankSum=-1.525;QD=29.12;ReadPosRankSum=2.891;VQSLOD=3.0102;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,138,1866	0/0:5,0:5:15.05:0,15,205	0/0:24,0:24:59.34:0,59,690	0/0:20,0:20:39.09:0,39,496	0/0:19,0:19:57.19:0,57,778	0/0:17,0:17:48.14:0,48,639	0/0:33,0:33:90.27:0,90,1198	0/0:28,0:28:72.12:0,72,930	0/0:32,0:32:87.27:0,87,1150	0/0:27,0:27:72.24:0,72,984	0/0:12,0:12:36.07:0,36,429	0/0:29,0:29:84.28:0,84,1148	1/1:0,25:25:69.20:781,69,0	1/1:0,21:21:60.17:680,60,0	0/0:37,0:37:99:0,105,1404	0/0:25,0:25:75.25:0,75,1025	0/0:42,0:42:99:0,120,1620	0/0:34,0:34:96.28:0,96,1278	0/0:25,0:25:66.18:0,66,853	0/0:10,0:10:27.09:0,27,368	0/0:46,0:46:99:0,129,1744	0/0:17,0:17:45.14:0,45,598	0/0:19,0:19:48.16:0,48,655	0/0:31,0:31:90.30:0,90,1228	0/0:11,0:11:30.09:0,30,395	0/0:19,0:19:54.17:0,54,724	0/0:21,0:21:57.19:0,57,779	0/0:5,0:5:12.04:0,12,164
chr10	40439700	.	CG	C	1304.06	PASS	AC=16;AF=0.296;AN=54;BaseQRankSum=4.092;DP=238;FS=0.000;HRun=6;HaplotypeScore=28.4412;InbreedingCoeff=0.7833;MQ=71.17;MQ0=0;MQRankSum=0.621;QD=22.10;ReadPosRankSum=2.898;VQSLOD=2.1043;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,10:10:27.07:290,27,0	./.	1/1:2,0:2:0.47:1,0,0	0/0:5,0:5:6.90:0,7,77	1/1:0,4:4:12.03:129,12,0	0/0:6,0:6:15.05:0,15,197	0/0:9,0:9:24.08:0,24,314	0/0:10,0:10:24.08:0,24,316	0/0:5,0:5:15.05:0,15,197	0/0:8,0:8:24.08:0,24,309	0/0:2,0:2:6.01:0,6,65	0/0:7,0:7:15.04:0,15,184	0/0:4,0:4:9.03:0,9,118	0/0:9,0:9:18.06:0,18,237	1/1:2,3:5:9.02:97,9,0	1/1:3,4:7:12.03:129,12,0	1/1:1,18:19:54.13:580,54,0	0/0:19,0:19:45.15:0,45,591	0/0:14,0:14:39.13:0,39,512	0/0:1,0:1:3.01:0,3,39	0/0:49,0:49:99:0,123,1528	1/1:2,5:7:15.04:161,15,0	0/0:4,0:4:9.03:0,9,119	0/0:20,0:20:45.14:0,45,579	1/1:1,4:5:9.02:97,9,0	0/0:5,0:5:12.04:0,12,158	0/0:1,0:1:3.01:0,3,39	0/0:1,0:1:3.01:0,3,39
chr10	40440793	.	AG	A	3803.33	PASS	AB=0.948;AC=52;AF=0.929;AN=56;BaseQRankSum=-2.489;DP=506;FS=5.206;HRun=1;HaplotypeScore=82.2822;InbreedingCoeff=0.1584;MQ=41.91;MQ0=26;MQRankSum=1.760;QD=7.59;ReadPosRankSum=-0.007;VQSLOD=0.7291;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:31,0:28:37.72:289,38,0	1/1:5,0:5:8.01:55,8,0	0/1:66,4:13:12.75:13,0,87	0/1:72,4:16:16.45:16,0,115	1/1:22,0:22:48.28:268,48,0	1/1:17,0:17:35.39:243,35,0	1/1:10,1:8:19.86:121,20,0	1/1:23,0:19:42.01:268,42,0	1/1:8,1:9:16.18:122,16,0	1/1:16,1:17:7.21:226,7,0	1/1:11,0:11:22.01:144,22,0	1/1:15,0:13:22.40:141,22,0	1/1:7,2:9:12.64:69,13,0	1/1:7,1:8:11.86:79,12,0	1/1:9,0:7:12.68:68,13,0	1/1:12,0:11:18.92:85,19,0	1/1:22,1:21:33.73:197,34,0	1/1:18,1:18:25.52:175,26,0	1/1:13,0:11:24.86:144,25,0	1/1:8,0:7:15.65:92,16,0	1/1:2,0:2:5.93:40,6,0	1/1:12,0:12:20.72:136,21,0	1/1:12,1:13:26.60:191,27,0	0/0:5,0:3:0.47:0,0,1	1/1:16,0:12:19.91:99,20,0	1/1:25,0:25:49.92:301,50,0	1/1:10,0:8:7.68:47,8,0	1/1:15,0:14:25.80:176,26,0
chr10	40440794	.	GA	G	417.82	PASS	AB=0.926;AC=13;AF=0.232;AN=56;BaseQRankSum=-0.756;DP=510;FS=1.483;HRun=15;HaplotypeScore=94.7980;InbreedingCoeff=-0.1308;MQ=42.15;MQ0=26;MQRankSum=-0.614;QD=2.26;ReadPosRankSum=-2.150;VQSLOD=-0.2254;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:24,6:27:60.30:184,0,60	0/0:5,0:5:0.02:0,0,0	0/0:70,1:14:11.89:0,12,211	0/0:75,0:16:1.10:0,1,176	0/1:18,4:22:14.78:128,0,15	0/0:17,0:17:7.65:0,8,122	0/1:12,0:9:0.17:0,0,22	0/0:24,0:20:13.06:0,13,76	0/1:9,0:9:4.91:5,0,13	0/0:17,0:17:11.77:0,12,52	0/0:13,0:13:3.10:0,3,20	0/0:15,0:13:5.54:0,6,35	0/0:9,0:9:16.25:0,16,90	1/1:8,0:8:1.23:4,1,0	0/1:8,1:7:8.79:41,0,9	0/1:10,2:11:53.85:57,0,54	0/1:21,3:22:45.01:45,0,55	0/1:18,0:17:5.66:6,0,15	0/0:14,0:12:21.41:0,21,131	0/0:8,0:7:11.41:0,11,66	0/0:2,0:2:0:0,0,0	0/1:11,1:12:13.93:25,0,14	0/1:13,0:13:4.53:5,0,30	0/0:5,0:3:3:0,3,25	0/1:15,1:12:47.62:48,0,61	0/0:25,0:25:27.19:0,27,159	0/0:10,0:8:9.36:0,9,62	0/0:14,0:13:5.35:0,5,22
chr10	40440801	.	A	AAG	1548.71	PASS	AB=0.831;AC=11;AF=0.196;AN=56;BaseQRankSum=-4.605;DP=526;FS=34.742;HRun=0;HaplotypeScore=105.0793;InbreedingCoeff=0.4682;MQ=45.86;MQ0=23;MQRankSum=-2.441;QD=12.59;ReadPosRankSum=2.613;VQSLOD=1.4269;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:20,7:27:9.56:487,10,0	0/0:6,0:6:11.69:0,12,81	0/0:76,0:15:13.74:0,14,277	0/0:81,0:19:35.84:0,36,338	0/1:18,2:21:18.08:173,0,18	0/0:19,0:19:50.86:0,51,549	0/0:13,0:10:26.85:0,27,260	0/0:24,0:20:33.88:0,34,243	0/0:10,0:10:17.62:0,18,145	0/0:19,0:18:44.37:0,44,289	0/0:13,0:13:26.22:0,26,137	0/0:14,0:12:16.92:0,17,156	0/0:9,0:9:18.17:0,18,149	0/0:8,0:8:5.59:0,6,36	1/1:8,2:9:1.09:91,1,0	1/1:7,4:11:9.83:288,10,0	0/1:18,6:23:15.95:270,0,16	0/0:19,0:18:2.70:0,3,57	0/0:17,0:16:34.10:0,34,311	0/0:8,0:8:18.99:0,19,156	0/0:2,0:2:5.93:0,6,39	0/1:7,2:9:17.59:92,0,18	0/0:11,0:11:23.28:0,23,201	0/0:5,0:3:3.01:0,3,38	1/1:15,3:16:19.91:300,20,0	0/0:26,0:26:42.22:0,42,451	0/0:12,0:10:15.38:0,15,87	0/0:11,0:10:12.48:0,12,64
chr10	40440806	.	AAG	A	2466.92	PASS	AB=0.993;AC=42;AF=0.750;AN=56;BaseQRankSum=-2.550;DP=520;FS=6.524;HRun=0;HaplotypeScore=97.5135;InbreedingCoeff=0.1492;MQ=50.50;MQ0=20;MQRankSum=1.073;QD=6.93;ReadPosRankSum=-2.504;VQSLOD=1.9148;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:24,3:25:20.29:281,20,0	1/1:6,0:6:8.64:48,9,0	0/0:78,0:18:19.13:0,19,301	0/0:82,0:19:4.98:0,5,209	1/1:18,4:22:26.85:265,27,0	0/1:17,0:17:21.27:21,0,100	0/1:12,0:11:36.04:36,0,37	1/1:23,0:19:25.77:188,26,0	0/1:9,0:9:3.75:26,0,4	1/1:18,0:17:22.73:123,23,0	1/1:12,0:12:28.82:162,29,0	0/1:13,0:11:2.20:2,0,50	1/1:8,0:8:10.32:52,10,0	1/1:5,0:5:5.98:46,6,0	1/1:11,0:10:15.43:147,15,0	1/1:8,3:11:8.29:138,8,0	1/1:16,10:25:12.53:206,13,0	1/1:19,0:18:7.77:56,8,0	0/1:19,0:18:9.10:126,0,9	1/1:10,0:10:13.12:79,13,0	1/1:2,0:2:2.92:17,3,0	1/1:9,1:10:7.48:91,7,0	0/1:11,0:11:15.44:15,0,38	0/0:4,0:3:1.25:0,1,3	0/1:17,1:15:7.21:182,0,7	1/1:24,0:24:47.14:241,47,0	0/1:14,0:12:7.51:57,0,8	1/1:9,0:8:2.74:12,3,0
chr10	40440807	.	AGAGAG	A	1266.76	PASS	AB=0.930;AC=18;AF=0.321;AN=56;BaseQRankSum=-1.612;DP=501;FS=6.049;HRun=0;HaplotypeScore=113.2521;InbreedingCoeff=0.1841;MQ=51.20;MQ0=20;MQRankSum=0.041;QD=6.85;ReadPosRankSum=-3.112;VQSLOD=0.4207;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,1:25:11.19:0,11,381	1/1:4,2:6:10.41:114,10,0	0/0:79,0:19:27.70:0,28,676	0/0:82,0:19:7.61:0,8,539	0/0:20,0:20:12.22:0,12,124	0/0:17,0:17:21.97:0,22,222	0/1:12,0:11:23.31:23,0,144	0/1:17,3:17:99:201,0,139	0/1:8,1:9:31.41:31,0,35	1/1:11,3:14:30.04:333,30,0	1/1:1,9:11:30.06:426,30,0	0/0:10,0:9:5.10:0,5,74	0/0:7,0:7:11.43:0,11,59	1/1:5,0:5:3.89:28,4,0	0/0:11,0:10:19.29:0,19,133	0/0:11,0:11:26.18:0,26,259	0/1:26,0:25:13.76:14,0,189	1/1:4,12:17:5.33:105,5,0	0/1:17,0:16:29.63:30,0,228	0/0:10,0:10:6.64:0,7,111	0/0:2,0:2:4.41:0,4,14	0/1:7,1:9:28.78:29,0,69	0/0:10,0:11:15.56:0,16,170	0/0:4,0:3:3.01:0,3,43	0/0:16,0:14:35.92:0,36,332	0/1:20,2:23:79.99:80,0,321	0/1:14,0:12:26.27:26,0,178	0/0:7,0:6:2.94:0,3,18
chr10	40440809	.	AG	A	539.29	PASS	AB=0.960;AC=21;AF=0.375;AN=56;BaseQRankSum=1.944;DP=486;FS=0.529;HRun=1;HaplotypeScore=92.6045;InbreedingCoeff=0.1740;MQ=52.03;MQ0=19;MQRankSum=0.322;QD=2.90;ReadPosRankSum=-0.478;VQSLOD=-0.6009;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:24:11.12:0,11,209	1/1:4,0:4:8.15:40,8,0	0/0:80,0:19:34.69:0,35,474	0/0:81,0:18:15.49:0,15,382	0/1:17,1:18:18.38:18,0,47	0/0:16,0:16:14.46:0,14,193	0/1:10,2:11:22.87:23,0,60	0/1:20,2:18:93.85:94,0,127	0/0:8,0:8:2.76:0,3,49	1/1:6,1:10:22.77:138,23,0	1/1:11,0:11:28.43:153,28,0	0/1:12,0:10:22.35:22,0,40	1/1:7,0:7:2.05:26,2,0	1/1:3,0:3:5.80:40,6,0	0/0:10,0:9:13.40:0,13,102	0/0:10,0:10:18.02:0,18,112	0/0:25,0:24:11.75:0,12,103	1/1:16,0:16:2.26:41,2,0	0/0:15,0:14:8.74:0,9,167	0/1:11,0:11:37.66:38,0,40	0/0:1,0:1:2.50:0,2,9	0/1:9,0:9:4.40:4,0,44	0/1:13,0:13:0.47:0,0,111	0/0:4,0:3:1.25:0,1,3	0/0:16,0:14:24.98:0,25,163	0/1:21,2:23:58.42:58,0,96	0/1:14,0:12:8.96:9,0,47	0/0:8,0:7:2.22:0,2,7
chr10	40440811	.	AG	A	3519.29	PASS	AB=0.947;AC=45;AF=0.804;AN=56;BaseQRankSum=-4.628;DP=489;FS=29.561;HRun=1;HaplotypeScore=83.5608;InbreedingCoeff=0.0811;MQ=53.61;MQ0=19;MQRankSum=2.576;QD=10.73;ReadPosRankSum=-2.245;VQSLOD=-0.2337;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:24:99:146,0,100	1/1:2,2:4:8.96:76,9,0	0/0:80,0:20:40.27:0,40,331	0/0:81,0:18:6.94:0,7,185	1/1:19,0:19:16.13:138,16,0	1/1:16,1:17:19.67:161,20,0	1/1:13,0:12:17.99:106,18,0	1/1:18,5:19:25.81:399,26,0	1/1:8,0:8:11.51:64,12,0	1/1:10,1:10:23.39:209,23,0	1/1:11,0:11:29.79:272,30,0	1/1:12,0:10:6.20:42,6,0	1/1:6,0:6:10.19:46,10,0	1/1:3,0:3:5.86:35,6,0	0/1:10,0:9:26.88:46,0,27	0/1:10,0:10:43.64:44,0,50	0/1:25,1:25:78.25:90,0,78	1/1:16,0:16:7.64:51,8,0	1/1:10,7:16:32.56:388,33,0	1/1:2,8:10:27.31:306,27,0	1/1:1,0:1:2.92:17,3,0	0/1:9,0:9:12.03:39,0,12	1/1:13,0:13:10.43:59,10,0	1/1:4,0:3:2.92:17,3,0	0/1:16,0:14:46.04:46,0,64	1/1:13,8:21:52.74:475,53,0	0/1:7,7:12:27.16:206,0,27	1/1:1,7:7:3.01:41,3,0
chr10	40441656	.	T	TTGTGTGTACG	6622.73	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=8.095;DP=680;FS=1.513;HRun=0;HaplotypeScore=221.5507;InbreedingCoeff=-0.3243;MQ=64.23;MQ0=8;MQRankSum=-10.892;QD=15.09;ReadPosRankSum=-6.814;VQSLOD=1.7448;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:37,0:37:99:381,0,396	0/1:12,0:12:34.31:251,0,34	0/0:29,0:13:12.04:0,12,180	0/0:32,0:18:11.16:0,11,185	0/1:20,0:20:99:202,0,326	0/0:19,0:17:36.11:0,36,746	0/0:26,0:26:57.11:0,57,1100	0/1:45,0:44:99:479,0,749	0/0:29,0:29:60.16:0,60,1118	0/1:24,0:24:99:451,0,366	0/1:21,0:21:28.75:29,0,166	0/0:26,0:26:54.63:0,55,1112	1/1:6,12:23:6.88:305,7,0	1/1:8,16:31:15.52:756,16,0	0/1:22,0:22:99:315,0,329	0/1:26,0:26:99:516,0,326	0/1:30,0:30:99:185,0,411	0/1:13,0:13:58.72:623,0,59	0/1:13,0:12:99:174,0,249	0/1:20,0:20:82.31:86,0,82	0/0:24,0:23:12.80:0,13,248	0/1:24,0:24:99:286,0,162	0/0:21,0:21:42.13:0,42,867	0/0:35,0:34:75.19:0,75,1522	0/1:20,0:20:99:482,0,194	0/1:29,0:29:99:300,0,548	0/1:20,0:19:99:450,0,145	0/1:9,0:9:99:352,0,115
chr10	40441665	.	CGT	C	2659.79	PASS	AB=0.749;AC=11;AF=0.196;AN=56;BaseQRankSum=-4.161;DP=767;FS=1.054;HRun=0;HaplotypeScore=143.6888;InbreedingCoeff=0.5679;MQ=52.61;MQ0=11;MQRankSum=8.001;QD=14.00;ReadPosRankSum=3.496;VQSLOD=3.2696;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:40:14.80:0,15,136	0/0:7,0:14:8.11:0,8,59	0/0:27,0:7:3.01:0,3,40	0/1:29,1:13:26.44:26,0,45	0/0:13,0:19:8.37:0,8,60	0/1:7,9:18:0.17:256,0,0	1/1:10,18:29:50.98:566,51,0	0/0:46,0:45:50.54:0,51,583	1/1:13,18:32:44.79:476,45,0	0/0:22,0:35:56.98:0,57,604	0/0:22,0:22:11.40:0,11,119	1/1:4,18:25:50.64:525,51,0	0/0:21,0:21:4.69:0,5,55	0/0:27,0:27:20.87:0,21,238	0/0:15,0:33:11.96:0,12,123	0/0:14,0:33:17.92:0,18,157	0/0:27,0:36:12.01:0,12,133	0/0:5,0:15:14.96:0,15,139	0/0:12,0:18:26.70:0,27,201	0/0:17,0:25:3:0,3,26	0/0:28,0:27:3:0,3,28	0/0:16,0:33:17.23:0,17,151	0/1:9,9:19:19.65:228,0,20	1/1:8,23:34:68.86:750,69,0	0/0:13,0:31:15.60:0,16,170	0/0:23,0:36:48.62:0,49,497	0/0:11,0:26:17.68:0,18,163	0/0:3,0:9:12:0,12,105
chr10	40443330	.	TTGTGTGTG	T	182.43	PASS	AC=10;AF=0.217;AN=46;BaseQRankSum=2.734;DP=458;FS=10.417;HRun=0;HaplotypeScore=87.6343;InbreedingCoeff=0.4936;MQ=41.11;MQ0=131;MQRankSum=-2.822;QD=1.98;ReadPosRankSum=0.099;VQSLOD=0.8634;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:12:3.01:40,3,0	0/0:6,0:7:12.04:0,12,294	./.	./.	0/0:9,0:7:2.99:0,3,24	0/0:14,0:13:9.90:0,10,134	0/0:17,0:14:12.51:0,13,230	0/0:14,0:7:3:0,3,27	0/0:14,0:10:15.05:0,15,284	0/0:24,0:23:24.07:0,24,374	0/0:11,0:10:6.02:0,6,75	0/0:15,0:12:5.77:0,6,33	1/1:11,0:9:2.85:56,3,0	./.	1/1:15,0:8:3.01:49,3,0	0/0:16,0:10:0.89:0,1,2	1/1:30,1:16:6.02:111,6,0	0/0:16,0:15:24.07:0,24,689	./.	0/0:8,0:8:3.01:0,3,55	0/0:34,0:24:17.76:0,18,203	1/1:13,4:16:3.01:49,3,0	0/0:5,0:4:2.97:0,3,20	0/0:18,0:11:3.01:0,3,33	./.	0/0:9,0:6:6.02:0,6,72	0/0:12,0:11:18.06:0,18,226	0/0:7,0:5:12.04:0,12,166
chr10	40443431	.	G	GGTGTGTGT	3789.63	PASS	AB=1.000;AC=49;AF=0.907;AN=54;BaseQRankSum=-1.224;DP=428;FS=0.000;HRun=0;HaplotypeScore=99.1766;InbreedingCoeff=0.2672;MQ=46.49;MQ0=27;MQRankSum=0.206;QD=10.33;ReadPosRankSum=2.145;VQSLOD=1.7667;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:12,13:27:12.04:453,12,0	./.	0/1:39,0:12:1.04:1,0,8	0/0:53,0:17:2.67:0,3,11	1/1:12,0:12:13.48:183,13,0	1/1:1,0:1:3.01:68,3,0	1/1:1,0:2:0.47:1,0,0	1/1:19,0:18:2.98:22,3,0	1/1:6,0:3:2.99:24,3,0	1/1:14,0:14:12:129,12,0	1/1:5,0:6:8.97:109,9,0	1/1:3,0:3:5.98:92,6,0	1/1:12,0:12:11.85:121,12,0	1/1:13,0:13:2.95:19,3,0	1/1:21,0:22:15.05:326,15,0	1/1:6,1:18:6.02:163,6,0	1/1:22,0:20:5.98:46,6,0	1/1:7,0:16:6.01:90,6,0	1/1:14,0:12:3:28,3,0	0/0:6,0:7:0.89:0,1,2	1/1:43,0:42:26.98:453,27,0	1/1:9,0:9:6.02:133,6,0	1/1:2,0:4:6.02:99,6,0	1/1:9,0:6:12.04:271,12,0	1/1:12,12:24:21.07:778,21,0	1/1:7,0:6:11.97:141,12,0	1/1:2,0:2:2.94:18,3,0	1/1:2,0:1:2.99:23,3,0
chr10	40443539	.	G	GTT	7041.28	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=-1.079;DP=648;FS=0.756;HRun=11;HaplotypeScore=87.5174;InbreedingCoeff=0.9595;MQ=71.88;MQ0=0;MQRankSum=-2.409;QD=18.88;ReadPosRankSum=0.416;VQSLOD=4.0491;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:41:60.98:0,61,686	1/1:1,0:7:14.97:51,15,0	0/0:24,0:24:33.56:0,34,437	0/0:17,0:15:9.93:0,10,194	1/1:2,17:21:38.98:467,39,0	1/1:3,19:25:47.05:578,47,0	1/1:4,18:24:5.99:379,6,0	0/0:26,0:29:41.32:0,41,417	1/1:4,15:20:30.10:429,30,0	1/1:13,0:35:37.80:237,38,0	1/1:1,0:9:19.28:66,19,0	1/1:3,29:34:62.52:783,63,0	1/1:3,19:24:34.80:428,35,0	1/1:5,15:21:28.91:390,29,0	1/1:3,21:27:32.60:443,33,0	1/1:0,23:25:58.42:749,58,0	1/1:4,15:21:32.59:428,33,0	1/1:6,2:21:7.35:153,7,0	0/0:22,0:23:38.94:0,39,427	0/0:23,0:25:53.73:0,54,506	0/0:22,0:23:44.65:0,45,462	0/0:26,0:28:31.38:0,31,524	1/1:3,11:19:38.09:465,38,0	1/1:6,29:40:79.16:995,79,0	0/0:13,0:15:29.35:0,29,301	0/0:20,0:20:48.04:0,48,465	0/0:22,0:23:39.96:0,40,364	0/0:6,0:6:12:0,12,116
chr10	40444161	.	TA	T	598.71	PASS	AB=0.794;AC=8;AF=0.500;AN=16;BaseQRankSum=-4.038;DP=150;FS=8.337;HRun=1;HaplotypeScore=35.3451;MQ=78.79;MQ0=29;MQRankSum=0.701;QD=7.04;ReadPosRankSum=2.577;VQSLOD=0.4449;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	1/1:5,0:5:8.93:71,9,0	0/0:37,1:7:2.30:0,2,54	0/1:26,0:8:13.72:14,0,35	./.	./.	./.	./.	./.	0/1:6,14:18:27.38:215,0,27	1/1:6,11:15:1.65:107,2,0	./.	./.	./.	./.	./.	./.	1/1:17,0:15:38.42:283,38,0	./.	./.	./.	./.	./.	./.	0/0:4,0:2:2.96:0,3,19	0/0:3,0:2:5.99:0,6,47	./.	./.
chr10	40446544	.	GTC	G	3720.33	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=13.686;DP=636;FS=0.000;HRun=0;HaplotypeScore=85.9347;InbreedingCoeff=0.9987;MQ=88.01;MQ0=0;MQRankSum=-3.361;QD=39.58;ReadPosRankSum=4.058;VQSLOD=5.7946;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:81.28:0,81,1555	0/0:11,0:11:30.09:0,30,538	0/0:30,0:30:67.05:0,67,1527	0/0:22,0:20:51.17:0,51,923	1/1:0,20:20:48.16:735,48,0	0/0:14,0:14:42.14:0,42,802	0/0:27,0:27:81.28:0,81,1547	0/0:22,0:22:63.22:0,63,1202	0/0:23,0:23:63.22:0,63,1216	0/0:26,0:26:72.25:0,72,1384	0/0:13,0:13:36.12:0,36,688	0/0:29,0:29:84.29:0,84,1612	0/0:21,0:21:63.20:0,63,1165	0/0:20,0:20:60.21:0,60,1158	1/1:0,26:26:78.26:1194,78,0	1/1:0,15:15:39.13:597,39,0	1/1:0,33:33:78.26:1194,78,0	0/0:19,0:19:57.16:0,57,1064	0/0:30,0:30:87.30:0,87,1632	0/0:19,0:19:57.20:0,57,1093	0/0:30,0:30:87.30:0,87,1662	0/0:19,0:19:57.17:0,57,1048	0/0:25,0:25:72.23:0,72,1349	0/0:24,0:24:66.23:0,66,1259	0/0:14,0:14:42.13:0,42,779	0/0:30,0:30:90.30:0,90,1702	0/0:37,0:37:99:0,111,2121	0/0:8,0:8:21.07:0,21,386
chr10	40446996	.	G	GTT	6772.46	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=5.812;DP=496;FS=7.055;HRun=6;HaplotypeScore=127.5891;InbreedingCoeff=0.9913;MQ=57.94;MQ0=1;MQRankSum=-8.274;QD=34.38;ReadPosRankSum=4.349;VQSLOD=3.6020;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:51.15:0,51,613	0/0:14,0:14:38.67:0,39,409	0/0:16,0:14:11.50:0,11,235	0/0:15,0:12:23.10:0,23,257	1/1:4,17:21:60.64:977,61,0	1/1:2,27:29:51.04:769,51,0	1/1:0,11:11:24.04:375,24,0	0/0:33,0:31:78.15:0,78,911	1/1:3,9:12:27.09:456,27,0	0/0:13,0:13:27.17:0,27,328	0/0:12,0:12:30.06:0,30,350	1/1:8,4:12:17.98:242,18,0	1/1:1,10:11:33.08:524,33,0	1/1:1,11:12:30.10:507,30,0	1/1:7,9:15:27.52:416,28,0	1/1:7,7:14:42.14:656,42,0	1/1:8,9:17:33.58:537,34,0	0/0:20,0:19:30.03:0,30,344	0/0:28,0:27:66.14:0,66,777	0/0:19,0:19:51.14:0,51,609	0/0:6,0:6:18.06:0,18,220	0/0:27,0:27:60.15:0,60,718	1/1:5,16:23:54.06:817,54,0	1/1:2,17:19:32.58:498,33,0	0/0:22,0:22:48.15:0,48,585	0/0:18,0:17:45.08:0,45,521	0/0:14,0:13:33.10:0,33,402	0/0:14,0:14:26.66:0,27,256
chr10	40446998	.	TTTTTG	T	2888.71	PASS	AB=0.966;AC=17;AF=0.304;AN=56;BaseQRankSum=7.887;DP=505;FS=8.611;HRun=0;HaplotypeScore=159.4085;InbreedingCoeff=0.4102;MQ=55.75;MQ0=2;MQRankSum=-7.833;QD=14.44;ReadPosRankSum=6.173;VQSLOD=2.1764;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:56.85:0,57,1042	0/0:13,0:13:37.65:0,38,707	0/0:18,0:14:17.83:0,18,416	0/0:13,0:10:23.10:0,23,302	1/1:17,4:21:59.99:643,60,0	0/1:28,0:28:54.94:80,0,55	0/1:12,0:12:7.75:58,0,8	0/0:34,0:32:78.24:0,78,1564	0/1:11,0:11:72.53:79,0,73	0/0:15,0:15:34.51:0,35,510	0/0:13,0:12:32.66:0,33,511	0/1:14,0:13:54.28:54,0,108	1/1:12,0:11:30.21:275,30,0	1/1:11,0:11:26.87:230,27,0	0/1:11,5:15:6.27:283,0,6	1/1:9,5:14:40.86:509,41,0	1/1:10,7:17:3.63:398,4,0	0/0:21,0:20:36.15:0,36,588	0/0:31,0:30:75.22:0,75,1671	0/0:20,0:20:54.18:0,54,1363	0/0:7,0:7:21.07:0,21,442	0/0:27,0:27:68.70:0,69,1221	0/1:24,0:24:99:195,0,148	0/1:20,0:20:23.93:268,0,24	0/0:21,0:21:51:0,51,752	0/0:18,0:17:45.13:0,45,1092	0/0:14,0:13:33.11:0,33,757	0/0:10,0:10:30.10:0,30,674
chr10	40447009	.	TG	T	576	PASS	AB=1.000;AC=10;AF=0.179;AN=56;BaseQRankSum=-0.204;DP=488;FS=6.168;HRun=1;HaplotypeScore=138.1910;InbreedingCoeff=0.7809;MQ=49.27;MQ0=6;MQRankSum=-2.337;QD=6.55;ReadPosRankSum=-2.882;VQSLOD=-0.5482;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:50.81:0,51,595	1/1:12,0:12:11.70:146,12,0	0/0:15,0:9:9.94:0,10,275	0/0:13,0:9:18.59:0,19,165	0/0:20,0:20:16.30:0,16,519	0/0:19,0:19:51.11:0,51,557	0/0:11,0:11:26.66:0,27,284	0/0:33,0:31:74.36:0,74,867	0/0:11,0:11:33.02:0,33,348	1/1:12,3:15:18.70:214,19,0	1/1:9,4:12:22.94:249,23,0	0/0:12,0:11:23.89:0,24,217	0/0:11,0:10:29.65:0,30,274	0/0:13,0:11:31.27:0,31,258	0/1:13,0:12:5.22:5,0,224	0/1:13,0:13:1.28:1,0,293	0/0:14,0:14:13.43:0,13,241	1/1:20,2:19:14.83:116,15,0	0/0:34,0:33:95.08:0,95,1135	0/0:20,0:19:54.10:0,54,673	0/0:8,0:8:24:0,24,263	0/0:20,0:20:54.10:0,54,606	0/0:24,0:23:50.83:0,51,624	0/0:19,0:19:32.32:0,32,282	0/0:19,0:19:45.03:0,45,514	0/0:18,0:17:48.08:0,48,577	0/0:21,0:20:50.89:0,51,582	0/0:11,0:11:10.17:0,10,336
chr10	40447025	.	TTTTTG	T	2541	PASS	AB=1.000;AC=28;AF=0.500;AN=56;BaseQRankSum=5.109;DP=463;FS=7.169;HRun=0;HaplotypeScore=146.6694;InbreedingCoeff=0.5795;MQ=43.12;MQ0=26;MQRankSum=-7.199;QD=9.93;ReadPosRankSum=1.294;VQSLOD=2.5405;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:5,30:35:35.84:627,36,0	0/0:11,0:11:17.12:0,17,198	0/0:19,0:5:9.50:0,10,167	0/0:11,0:1:2.68:0,3,11	0/1:10,0:8:14.30:26,0,14	1/1:18,0:18:16.97:145,17,0	1/1:12,0:10:3.40:74,3,0	0/1:28,0:24:14.29:14,0,165	1/1:11,0:10:24.77:125,25,0	0/0:17,0:16:3.96:0,4,138	0/0:17,0:16:38.96:0,39,375	1/1:12,0:11:21.66:108,22,0	1/1:10,0:9:19.57:136,20,0	1/1:13,0:9:0.38:114,0,0	1/1:12,0:9:1.31:43,1,0	0/1:13,0:11:5.96:66,0,6	1/1:13,0:13:12.24:126,12,0	0/0:21,0:18:8.47:0,8,173	0/0:37,0:33:37.31:0,37,600	0/0:19,0:18:39.30:0,39,422	0/0:8,0:7:11.23:0,11,144	1/1:5,14:19:32.94:482,33,0	0/1:22,0:21:9.09:98,0,9	1/1:14,0:14:18.71:138,19,0	1/1:1,13:14:24.08:416,24,0	0/0:19,0:18:32.30:0,32,387	0/0:19,0:18:38.21:0,38,407	0/0:9,0:8:24.02:0,24,240
chr10	40447029	.	TG	T	3739.80	PASS	AB=0.931;AC=33;AF=0.589;AN=56;BaseQRankSum=11.500;DP=440;FS=7.007;HRun=1;HaplotypeScore=115.2303;InbreedingCoeff=0.7082;MQ=42.63;MQ0=27;MQRankSum=-7.589;QD=14.22;ReadPosRankSum=0.323;VQSLOD=2.8027;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:32,0:33:18.29:183,18,0	0/1:7,1:8:19.72:20,0,34	0/1:18,1:5:9.08:9,0,61	0/0:11,0:2:0.31:0,0,22	1/1:8,0:6:16.14:99,16,0	1/1:1,16:17:45.12:569,45,0	1/1:5,7:10:19.81:216,20,0	0/0:27,0:24:41.40:0,41,245	1/1:1,10:10:30.10:383,30,0	0/0:12,0:11:2.27:0,2,65	0/0:15,0:14:14.92:0,15,83	1/1:1,11:11:24.02:277,24,0	1/1:2,8:9:23.62:249,24,0	1/1:6,8:10:24.16:252,24,0	1/1:9,0:6:15.91:82,16,0	1/1:13,0:11:30.73:172,31,0	1/1:13,0:13:18.37:151,18,0	0/1:20,1:18:26.17:26,0,41	0/0:37,0:32:52.78:0,53,349	0/0:19,0:18:22.97:0,23,166	0/0:7,0:6:16.07:0,16,78	1/1:15,0:15:28.94:132,29,0	1/1:3,17:19:28.31:469,28,0	1/1:2,12:14:29.74:329,30,0	1/1:14,0:14:23.08:122,23,0	0/0:20,0:19:33.61:0,34,172	0/0:20,0:19:21.31:0,21,153	0/0:9,0:8:21.70:0,22,98
chr10	40447033	.	TG	T	1102.11	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=13.379;DP=446;FS=2.736;HRun=1;HaplotypeScore=122.6796;InbreedingCoeff=0.9654;MQ=42.26;MQ0=27;MQRankSum=-10.584;QD=7.06;ReadPosRankSum=-0.068;VQSLOD=0.6505;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:34.49:0,34,203	0/0:8,1:9:15.94:0,16,245	0/0:15,0:3:8.70:0,9,89	0/0:12,0:3:9.01:0,9,109	1/1:3,6:6:12.66:85,13,0	1/1:18,0:18:35.82:135,36,0	1/1:10,2:10:18.25:82,18,0	0/0:25,0:22:56.91:0,57,676	1/1:12,0:10:26.07:136,26,0	0/0:11,0:10:23.93:0,24,295	0/0:15,0:14:39.13:0,39,531	1/1:13,0:12:19.99:99,20,0	1/1:10,1:9:17.49:92,17,0	1/1:10,3:9:23.13:133,23,0	1/1:2,7:6:15.12:71,15,0	1/1:4,8:10:16.50:101,16,0	1/1:5,8:13:24.25:138,24,0	0/0:20,1:18:16.19:0,16,229	0/0:39,0:34:98.83:0,99,1287	0/0:22,0:21:56.90:0,57,729	0/0:8,0:7:17.99:0,18,241	0/0:15,0:15:23.21:0,23,114	1/1:19,0:18:26.36:125,26,0	1/1:15,0:13:25.83:132,26,0	0/0:16,0:16:22.07:0,22,110	0/0:20,0:19:45.08:0,45,631	0/0:20,0:20:44.98:0,45,613	0/0:9,0:8:24.08:0,24,361
chr10	40447036	.	TTGTTTG	T	2752.18	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=13.141;DP=436;FS=9.985;HRun=0;HaplotypeScore=140.2956;InbreedingCoeff=0.9629;MQ=42.20;MQ0=27;MQRankSum=-10.082;QD=19.38;ReadPosRankSum=0.344;VQSLOD=2.6989;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:49.83:0,50,387	0/0:9,0:9:21.07:0,21,496	0/0:17,0:4:12.04:0,12,236	0/0:12,0:3:8.52:0,9,145	1/1:5,3:5:14.78:193,15,0	1/1:17,0:17:36.70:422,37,0	1/1:11,0:9:6.48:145,6,0	0/0:21,0:18:42.04:0,42,905	1/1:12,0:10:23.49:239,23,0	0/0:11,0:10:20.66:0,21,423	0/0:16,0:15:39.13:0,39,954	1/1:13,0:12:23.63:234,24,0	1/1:11,0:9:16.41:105,16,0	1/1:12,0:8:19.25:115,19,0	1/1:4,5:6:18.06:255,18,0	1/1:6,5:9:22.88:276,23,0	1/1:3,7:10:24.08:400,24,0	0/0:24,0:21:35.76:0,36,622	0/0:38,0:33:92.75:0,93,1773	0/0:24,0:23:66.22:0,66,1416	0/0:8,0:7:18.06:0,18,408	0/0:15,0:15:28.81:0,29,206	1/1:15,0:14:29.87:330,30,0	1/1:13,0:11:26.37:265,26,0	0/0:16,0:16:26.90:0,27,226	0/0:20,0:19:45.15:0,45,1041	0/0:20,0:20:45.09:0,45,1010	0/0:9,0:8:24.08:0,24,585
chr10	40447037	.	TG	T	1362.04	PASS	AB=0.889;AC=23;AF=0.411;AN=56;BaseQRankSum=12.590;DP=423;FS=5.318;HRun=1;HaplotypeScore=110.6881;InbreedingCoeff=0.8689;MQ=42.30;MQ0=27;MQRankSum=-9.533;QD=10.32;ReadPosRankSum=0.742;VQSLOD=1.5048;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:46.81:0,47,290	0/0:9,0:9:20.90:0,21,287	0/0:17,0:4:8.96:0,9,110	0/0:12,0:3:9.02:0,9,114	0/1:7,0:5:8.38:21,0,8	1/1:1,15:16:38.75:296,39,0	1/1:5,5:8:16.05:103,16,0	0/0:20,0:17:42.03:0,42,577	1/1:3,7:8:23.81:169,24,0	0/0:11,0:10:20.73:0,21,268	0/0:17,0:16:39.13:0,39,578	1/1:3,10:12:23.66:160,24,0	1/1:4,5:7:15.73:102,16,0	1/1:3,8:7:17.55:118,18,0	1/1:9,0:6:10.59:53,11,0	1/1:10,0:9:2.23:68,2,0	1/1:9,0:9:10.11:94,10,0	0/0:25,0:22:32.73:0,33,364	0/0:36,0:31:92.83:0,93,1219	0/0:24,0:23:66.10:0,66,920	0/0:8,0:7:15.05:0,15,229	0/0:14,0:14:25.88:0,26,137	1/1:1,12:12:30.99:233,31,0	1/1:3,10:11:25.45:159,25,0	0/0:16,0:16:26.19:0,26,168	0/0:20,0:19:45.15:0,45,666	0/0:20,0:20:45.08:0,45,632	0/0:9,0:8:24.08:0,24,366
chr10	40447038	.	G	GT	692.05	PASS	AB=1.000;AC=25;AF=0.446;AN=56;BaseQRankSum=9.337;DP=435;FS=13.516;HRun=3;HaplotypeScore=119.7576;InbreedingCoeff=0.7929;MQ=41.99;MQ0=25;MQRankSum=-8.669;QD=4.30;ReadPosRankSum=-1.342;VQSLOD=-0.7295;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:44.85:0,45,425	0/0:9,0:9:21.06:0,21,251	0/0:17,0:4:9.02:0,9,92	0/0:12,0:3:9.01:0,9,95	1/1:5,3:5:4.77:40,5,0	1/1:18,0:18:1.88:35,2,0	1/1:9,2:9:5.08:56,5,0	0/0:20,0:17:36.11:0,36,428	1/1:10,0:8:5.03:31,5,0	0/0:10,0:9:18.05:0,18,216	0/0:17,0:16:39.12:0,39,465	1/1:14,0:13:7.41:40,7,0	1/1:10,3:11:16.06:108,16,0	1/1:10,3:9:25.07:139,25,0	1/1:9,2:8:8.49:56,8,0	1/1:9,3:10:15.66:97,16,0	1/1:7,2:9:23.44:161,23,0	0/0:25,0:23:33.07:0,33,371	0/0:34,0:29:77.88:0,78,862	0/0:24,0:23:66.20:0,66,783	0/0:8,0:7:15.05:0,15,180	0/1:14,0:14:9.56:10,0,170	1/1:15,0:14:9.15:66,9,0	1/1:13,0:11:10.73:60,11,0	0/0:16,0:16:26.98:0,27,253	0/0:20,0:19:45.08:0,45,523	0/0:20,0:20:41.87:0,42,483	0/0:9,0:8:24.07:0,24,287
chr10	40447040	.	TTG	T	2223.22	PASS	AB=1.000;AC=25;AF=0.446;AN=56;BaseQRankSum=12.663;DP=423;FS=9.397;HRun=0;HaplotypeScore=113.1270;InbreedingCoeff=0.8860;MQ=42.24;MQ0=24;MQRankSum=-9.983;QD=14.25;ReadPosRankSum=0.397;VQSLOD=3.1038;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:28.32:0,28,182	0/0:9,0:9:21.07:0,21,348	0/0:18,0:4:12.04:0,12,190	0/0:11,0:3:9:0,9,113	1/1:8,0:5:11.18:61,11,0	1/1:18,0:18:39.45:485,39,0	1/1:11,0:9:9.48:129,9,0	0/0:19,0:17:39.08:0,39,613	1/1:9,0:7:20.97:249,21,0	0/0:9,0:8:18.06:0,18,304	0/0:18,0:17:42.06:0,42,687	1/1:12,0:11:20.50:241,20,0	1/1:8,5:11:13.98:97,14,0	1/1:5,8:9:12:126,12,0	1/1:11,0:8:16.25:120,16,0	1/1:12,0:10:17.33:133,17,0	1/1:9,0:9:18.35:139,18,0	0/0:23,0:21:37.67:0,38,501	0/0:31,0:27:77.52:0,78,1147	0/0:24,0:23:66.22:0,66,1059	0/0:8,0:7:18.06:0,18,300	0/1:14,0:14:25.04:25,0,49	1/1:15,0:14:35.97:426,36,0	1/1:10,1:9:18.94:215,19,0	0/0:16,0:16:20.27:0,20,107	0/0:20,0:19:45.07:0,45,722	0/0:19,0:19:42.08:0,42,697	0/0:9,0:8:24.03:0,24,390
chr10	40447041	.	TG	T	1415.62	PASS	AB=1.000;AC=25;AF=0.446;AN=56;BaseQRankSum=12.523;DP=422;FS=11.639;HRun=1;HaplotypeScore=107.3016;InbreedingCoeff=0.8628;MQ=42.59;MQ0=24;MQRankSum=-9.557;QD=9.31;ReadPosRankSum=0.244;VQSLOD=0.0791;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:46.42:0,46,308	0/0:9,0:9:21.07:0,21,296	0/0:18,0:4:12:0,12,147	0/0:11,0:3:8.92:0,9,99	1/1:7,0:4:8.78:45,9,0	1/1:5,13:18:38.92:297,39,0	1/1:5,5:8:2.40:55,2,0	0/0:19,0:17:42.01:0,42,527	1/1:2,7:7:20.82:147,21,0	0/0:9,0:8:18.06:0,18,257	0/0:19,0:18:44.79:0,45,573	1/1:2,10:11:20.39:137,20,0	1/1:12,0:10:12.43:79,12,0	1/1:13,0:9:10.28:100,10,0	1/1:11,0:8:19.98:127,20,0	1/1:10,0:8:17:110,17,0	1/1:10,0:10:22.06:140,22,0	0/0:23,0:21:41.69:0,42,496	0/0:30,0:26:77.50:0,78,995	0/0:24,0:23:66.22:0,66,917	0/0:8,0:7:18.06:0,18,253	0/1:14,0:14:17.71:18,0,74	1/1:5,10:14:35.47:264,35,0	1/1:2,9:9:18.16:116,18,0	0/0:17,0:17:26.73:0,27,177	0/0:20,0:19:45.07:0,45,615	0/0:19,0:19:42.07:0,42,582	0/0:9,0:8:24.03:0,24,324
chr10	40447330	.	ATGATGATGATGATGGTAG	A	5363.78	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=6.650;DP=752;FS=14.640;HRun=0;HaplotypeScore=295.8027;InbreedingCoeff=0.8371;MQ=55.00;MQ0=14;MQRankSum=-8.090;QD=22.63;ReadPosRankSum=-0.035;VQSLOD=2.1891;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:44:18.92:0,19,677	0/0:12,0:12:18.58:0,19,998	0/0:54,0:22:24.97:0,25,708	0/0:49,0:17:24.71:0,25,672	1/1:14,0:14:5.82:65,6,0	1/1:14,1:15:15.05:416,15,0	1/1:3,33:36:12.04:518,12,0	0/0:29,0:29:50.58:0,51,1288	1/1:27,0:27:24.08:550,24,0	0/0:33,0:33:69.24:0,69,3433	0/0:26,0:26:18.75:0,19,1173	0/0:33,0:33:16.05:0,16,905	1/1:6,17:23:14.93:742,15,0	1/1:2,23:24:30.10:1406,30,0	1/1:33,0:33:47.94:849,48,0	1/1:24,0:24:32.95:553,33,0	1/1:16,0:16:17.67:220,18,0	0/0:20,0:20:33.11:0,33,2211	0/1:14,0:13:15.08:15,0,941	0/0:24,0:24:60.21:0,60,3361	0/0:36,0:36:48.14:0,48,2459	0/0:35,0:34:28.50:0,28,1272	1/1:10,0:10:2.94:30,3,0	0/0:33,0:33:3.48:0,3,103	0/0:19,0:19:15.05:0,15,760	0/0:27,0:27:45.13:0,45,2473	0/0:30,0:30:33.11:0,33,2224	0/0:10,0:10:12.04:0,12,916
chr10	40447333	.	ATGATGATGATGGTAG	A	6760.68	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=3.808;DP=746;FS=12.768;HRun=0;HaplotypeScore=259.8639;InbreedingCoeff=0.4566;MQ=54.08;MQ0=17;MQRankSum=-6.887;QD=18.22;ReadPosRankSum=-1.147;VQSLOD=2.0405;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:44,0:43:72.29:72,0,497	0/0:12,0:12:15.16:0,15,715	0/0:55,0:18:37.01:0,37,959	0/0:50,0:17:32.90:0,33,791	1/1:13,0:13:11.85:211,12,0	1/1:2,14:16:15.05:608,15,0	0/1:36,0:36:9.77:342,0,10	0/1:32,0:32:23.50:23,0,1146	1/1:2,24:26:24.08:1015,24,0	0/0:30,0:30:72.95:0,73,2882	0/0:26,0:26:9.83:0,10,759	0/1:28,0:28:3.09:3,0,538	0/1:23,0:23:4.83:523,0,5	1/1:25,0:24:13.17:983,13,0	1/1:34,0:34:51.10:1514,51,0	1/1:25,0:25:39.12:1027,39,0	1/1:16,0:16:21.51:315,22,0	0/0:21,0:21:27.43:0,27,1793	0/1:15,0:14:48.03:48,0,911	0/0:24,0:24:60.68:0,61,2783	0/0:35,0:35:27.81:0,28,1815	0/0:34,0:33:20.69:0,21,789	1/1:9,0:9:2.94:30,3,0	0/0:31,0:31:3.01:0,3,64	0/0:19,0:19:14.26:0,14,573	0/1:28,0:29:46.10:46,0,1825	0/0:28,0:28:33.10:0,33,1798	0/0:10,0:10:12.04:0,12,766
chr10	40447336	.	A	ATGG	11068.61	PASS	AB=1.000;AC=31;AF=0.554;AN=56;BaseQRankSum=-12.935;DP=766;FS=1.903;HRun=0;HaplotypeScore=161.9553;InbreedingCoeff=0.6991;MQ=52.79;MQ0=16;MQRankSum=8.393;QD=24.60;ReadPosRankSum=-0.581;VQSLOD=4.7408;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,44:46:23.98:427,24,0	1/1:0,12:12:22.01:485,22,0	0/0:57,0:17:42.07:0,42,469	0/0:54,0:19:29.71:0,30,342	0/0:10,0:14:8.66:0,9,56	0/0:16,0:16:14.90:0,15,112	0/0:36,0:36:17.86:0,18,155	1/1:0,29:31:92.72:1046,93,0	0/0:25,0:25:23.87:0,24,183	1/1:1,32:33:92.85:1319,93,0	1/1:2,27:29:29.92:689,30,0	0/0:28,0:28:32.91:0,33,366	0/0:21,0:22:23.95:0,24,198	0/0:24,0:23:35.83:0,36,288	0/1:22,0:34:9.89:10,0,281	0/1:16,0:24:19.69:20,0,204	0/1:15,0:16:61.63:62,0,64	1/1:1,22:23:33.11:759,33,0	1/1:3,12:16:27.81:472,28,0	1/1:2,23:25:45.43:1164,45,0	1/1:0,34:35:48.16:1105,48,0	1/1:1,37:37:32.65:754,33,0	0/0:12,0:12:2.90:0,3,20	0/0:28,0:28:6:0,6,59	1/1:2,18:20:0.38:261,0,0	1/1:1,25:28:80.70:1462,81,0	1/1:0,28:28:33.11:759,33,0	1/1:0,10:10:12.04:276,12,0
chr10	40447342	.	ATGGTAG	A	4303.98	PASS	AB=1.000;AC=24;AF=0.429;AN=56;BaseQRankSum=8.313;DP=740;FS=8.915;HRun=0;HaplotypeScore=199.1856;InbreedingCoeff=0.6983;MQ=51.43;MQ0=17;MQRankSum=-8.802;QD=12.96;ReadPosRankSum=1.859;VQSLOD=3.1094;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:43,0:42:6.84:7,0,559	0/0:12,0:12:18.72:0,19,469	0/0:61,0:17:47.19:0,47,1252	0/0:55,0:18:39.16:0,39,988	1/1:11,1:12:11.72:152,12,0	1/1:15,0:15:15.05:240,15,0	0/1:34,0:34:9.91:182,0,10	0/0:27,0:27:50.82:0,51,1343	1/1:25,0:25:24.08:383,24,0	0/0:32,0:32:93.29:0,93,2395	0/0:27,0:27:15.14:0,15,631	1/1:2,27:29:29.97:716,30,0	0/1:20,0:20:4.91:209,0,5	1/1:23,0:22:13.13:445,13,0	1/1:34,0:34:51.11:862,51,0	1/1:20,0:20:39.12:641,39,0	1/1:16,0:16:21.51:325,22,0	0/0:20,0:20:36.04:0,36,1033	0/1:16,0:16:2.61:3,0,767	0/0:23,0:23:66.21:0,66,1767	0/0:30,0:30:49.41:0,49,1271	0/0:36,0:35:29.41:0,29,692	1/1:1,15:16:2.95:68,3,0	1/1:1,28:29:2.71:72,3,0	0/0:21,0:21:18.06:0,18,448	0/0:26,0:26:44:0,44,1639	0/0:28,0:28:39.13:0,39,1163	0/0:10,0:10:12.04:0,12,394
chr10	40447344	.	GGT	G	897.23	PASS	AB=1.000;AC=22;AF=0.393;AN=56;BaseQRankSum=12.967;DP=740;FS=3.937;HRun=0;HaplotypeScore=182.5275;InbreedingCoeff=0.7918;MQ=51.38;MQ0=17;MQRankSum=-8.537;QD=3.41;ReadPosRankSum=3.988;VQSLOD=2.7303;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:44:26.19:0,26,479	0/0:12,0:12:18.12:0,18,359	0/0:64,0:19:50.93:0,51,908	0/0:55,0:18:50.06:0,50,874	1/1:7,5:12:8.17:45,8,0	1/1:15,0:15:14.06:68,14,0	0/1:34,0:34:10.89:36,0,11	0/0:28,0:28:84.29:0,84,1592	1/1:24,0:24:22.59:111,23,0	0/0:32,0:32:93.32:0,93,1782	0/0:27,0:27:15.35:0,15,529	1/1:27,0:27:28.67:150,29,0	0/1:19,0:19:5.93:51,0,6	1/1:23,0:22:10.39:106,10,0	1/1:17,16:33:47.23:232,47,0	1/1:10,10:20:36.88:202,37,0	1/1:5,8:13:16.53:74,17,0	0/0:20,0:20:36.12:0,36,632	0/0:16,0:16:40.05:0,40,735	0/0:24,0:24:66.22:0,66,1105	0/0:29,0:29:54.18:0,54,929	0/0:36,0:35:33.04:0,33,705	1/1:15,0:15:2.80:13,3,0	1/1:28,0:28:2.74:15,3,0	0/0:21,0:21:18.06:0,18,324	0/0:27,0:27:76.78:0,77,1349	0/0:28,0:28:42.14:0,42,746	0/0:13,0:13:21.07:0,21,342
chr10	40447347	.	AG	A	333.31	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=13.918;DP=741;FS=1.463;HRun=1;HaplotypeScore=177.6320;InbreedingCoeff=0.8924;MQ=52.18;MQ0=17;MQRankSum=-9.102;QD=1.30;ReadPosRankSum=4.551;VQSLOD=-0.7257;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:42:31.95:0,32,442	0/0:14,0:14:21.08:0,21,379	0/0:66,0:20:51.93:0,52,838	0/0:55,0:18:47.18:0,47,700	1/1:5,5:10:2.44:6,2,0	1/1:15,0:15:10.70:34,11,0	1/1:33,0:33:7.72:24,8,0	0/0:32,0:32:93.31:0,93,1454	1/1:24,0:24:17.18:55,17,0	0/0:32,0:32:93.31:0,93,1467	0/0:29,0:29:22.20:0,22,547	1/1:27,0:27:23.25:80,23,0	1/1:18,0:18:11.10:37,11,0	1/1:23,0:22:19.58:63,20,0	1/1:16,16:32:32.80:100,33,0	1/1:10,10:20:27:97,27,0	1/1:4,8:12:10.80:30,11,0	0/0:20,0:20:36.12:0,36,566	0/0:14,0:14:39.08:0,39,600	0/0:24,0:24:69.22:0,69,1074	0/0:30,0:30:57.18:0,57,885	0/0:37,0:36:35.57:0,36,677	1/1:15,0:15:2.04:6,2,0	1/1:28,0:28:2.37:8,2,0	0/0:21,0:21:18.06:0,18,288	0/0:26,0:26:75.25:0,75,1172	0/0:28,0:28:42.14:0,42,671	0/0:13,0:13:21.07:0,21,336
chr10	40447363	.	GTGA	G	1584.56	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=8.334;DP=751;FS=1.053;HRun=0;HaplotypeScore=182.0215;InbreedingCoeff=0.8852;MQ=60.22;MQ0=13;MQRankSum=-3.557;QD=18.21;ReadPosRankSum=-1.926;VQSLOD=2.7718;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:44:28.46:0,28,482	0/0:12,0:12:15.25:0,15,329	0/0:53,0:24:68.30:0,68,1189	0/0:49,0:26:63.57:0,64,1066	1/1:0,16:17:20.61:165,21,0	0/0:18,0:18:21.75:0,22,236	0/0:40,0:40:24.18:0,24,306	0/0:32,0:32:84.25:0,84,1648	0/0:29,0:29:32.88:0,33,332	0/0:28,0:28:75.25:0,75,1511	0/0:26,0:26:12.48:0,12,565	0/0:31,0:31:48.11:0,48,586	0/0:23,0:23:21.73:0,22,266	0/0:30,0:29:34.42:0,34,414	1/1:8,25:33:65.85:841,66,0	1/1:7,17:24:8.95:528,9,0	1/1:8,5:13:20.48:204,20,0	0/0:17,0:17:30.57:0,31,645	0/0:18,0:18:46.39:0,46,843	0/0:26,0:26:57.17:0,57,1133	0/0:27,0:27:36.11:0,36,686	0/0:35,0:34:8.51:0,9,345	0/0:16,0:16:15.04:0,15,241	0/0:27,0:27:9.03:0,9,126	0/0:19,0:19:3.01:0,3,64	0/0:20,0:20:51.18:0,51,1073	0/0:26,0:26:39.13:0,39,819	0/0:17,0:16:30.06:0,30,551
chr10	40448000	.	TCTTCCCA	T	11063.53	PASS	AB=0.525;AC=19;AF=0.339;AN=56;BaseQRankSum=12.261;DP=722;FS=7.854;HRun=0;HaplotypeScore=180.7576;InbreedingCoeff=0.9154;MQ=82.64;MQ0=1;MQRankSum=-15.517;QD=51.46;ReadPosRankSum=0.042;VQSLOD=4.2883;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,28:31:54.66:1342,55,0	0/0:11,0:11:33.11:0,33,1243	0/0:28,0:28:54.78:0,55,2250	0/0:29,0:29:54.66:0,55,2476	0/0:27,0:27:78.27:0,78,2957	0/0:26,0:26:75.26:0,75,2809	0/0:33,0:33:96.31:0,96,3354	1/1:2,19:21:54.15:1171,54,0	0/0:23,0:23:66.23:0,66,2584	0/0:27,0:27:81.23:0,81,2747	0/0:17,0:17:48.16:0,48,1830	0/0:34,0:34:96.32:0,96,3645	0/0:21,0:21:63.22:0,63,2493	0/0:32,0:32:93.32:0,93,3561	0/0:46,0:46:99:0,135,5122	0/0:35,0:35:99:0,105,4050	0/0:36,0:36:99:0,102,3868	0/0:32,0:32:90.31:0,90,3419	1/1:4,14:18:39.13:971,39,0	1/1:1,22:23:60.21:1510,60,0	1/1:5,17:22:27.09:640,27,0	1/1:1,20:21:48.16:1179,48,0	0/0:23,0:23:69.24:0,69,2613	0/0:27,0:26:70.45:0,70,2640	1/1:2,21:23:39.13:987,39,0	0/1:3,29:32:31.06:1961,0,31	1/1:2,16:18:39.13:996,39,0	1/1:2,4:6:12.04:307,12,0
chr10	40448679	.	AC	A	5390.04	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=12.741;DP=684;FS=3.972;HRun=4;HaplotypeScore=68.4527;InbreedingCoeff=0.9998;MQ=83.51;MQ0=0;MQRankSum=-1.146;QD=32.08;ReadPosRankSum=-0.071;VQSLOD=5.2581;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,99,1367	0/0:11,0:11:30.10:0,30,419	0/0:22,0:22:57.18:0,57,769	0/0:23,0:23:48.05:0,48,464	0/0:21,0:21:57.17:0,57,772	0/0:22,0:22:66.21:0,66,899	0/0:35,0:35:99:0,102,1425	1/1:1,28:29:84.26:1004,84,0	0/0:21,0:21:60.20:0,60,839	0/0:25,0:25:75.25:0,75,1038	0/0:19,0:19:54.18:0,54,747	0/0:25,0:25:75.25:0,75,1048	0/0:15,0:15:45.15:0,45,630	0/0:22,0:22:66.21:0,66,908	0/0:30,0:30:84.28:0,84,1176	0/0:21,0:21:63.21:0,63,881	0/0:37,0:37:99:0,108,1495	0/0:20,0:20:57.19:0,57,794	1/1:3,19:22:57.17:682,57,0	1/1:5,23:28:66.20:789,66,0	1/1:1,29:30:78.24:936,78,0	0/0:30,0:30:87.26:0,87,1171	0/0:18,0:18:54.18:0,54,753	0/0:28,0:28:78.26:0,78,1088	0/0:33,0:33:87.29:0,87,1217	1/1:1,25:26:72.22:864,72,0	1/1:1,21:22:63.19:756,63,0	1/1:1,10:11:30.09:359,30,0
chr10	40449839	.	AG	A	2069.03	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=2.967;DP=549;FS=9.272;HRun=5;HaplotypeScore=81.3916;InbreedingCoeff=0.8575;MQ=74.71;MQ0=1;MQRankSum=-1.408;QD=22.99;ReadPosRankSum=1.520;VQSLOD=2.2134;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,33:34:96.27:1088,96,0	0/0:14,0:14:39.12:0,39,518	0/1:16,0:13:1.70:2,0,315	0/0:28,0:27:58.99:0,59,692	0/0:28,0:28:81.26:0,81,1091	0/0:15,0:15:39.13:0,39,533	0/0:16,0:16:42.10:0,42,550	0/0:23,0:23:63.19:0,63,834	0/0:23,0:23:57.19:0,57,778	0/0:15,0:15:42.14:0,42,573	0/0:23,0:23:69.23:0,69,942	0/0:22,0:22:63.21:0,63,857	0/0:15,0:15:39.09:0,39,512	0/0:22,0:22:60.19:0,60,808	0/0:19,0:19:54.18:0,54,738	0/0:23,0:23:63.21:0,63,862	0/0:25,0:25:69.20:0,69,923	0/0:8,0:8:21.07:0,21,287	0/0:9,0:9:24.06:0,24,298	0/0:19,0:19:57.15:0,57,755	0/0:30,0:30:87.27:0,87,1173	1/1:0,23:23:66.19:748,66,0	0/0:24,0:24:59.96:0,60,801	0/0:10,0:10:27.09:0,27,369	1/1:5,12:17:33.09:374,33,0	0/0:15,1:16:5.05:0,5,437	0/0:25,0:25:60.20:0,60,820	0/0:7,0:7:20.98:0,21,254
chr10	40449879	.	TA	T	2086.93	PASS	AB=0.753;AC=38;AF=0.679;AN=56;BaseQRankSum=2.380;DP=521;FS=14.609;HRun=15;HaplotypeScore=96.8654;InbreedingCoeff=0.6238;MQ=77.30;MQ0=1;MQRankSum=-3.675;QD=6.23;ReadPosRankSum=5.270;VQSLOD=1.0119;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,1:33:20.79:0,21,419	0/0:6,0:10:19.27:0,19,118	0/0:40,1:19:0.27:0,0,37	0/0:38,0:21:13.72:0,14,99	1/1:5,15:22:41.25:257,41,0	1/1:1,0:15:26.47:76,26,0	1/1:3,0:15:28.70:82,29,0	1/1:11,11:23:21.13:128,21,0	1/1:2,0:17:25.32:72,25,0	0/0:10,0:29:67.10:0,67,400	0/0:6,0:19:34.99:0,35,187	1/1:7,0:20:25.17:72,25,0	1/1:4,0:9:11.70:33,12,0	1/1:9,0:16:10.14:29,10,0	1/1:4,11:15:23.62:153,24,0	1/1:5,10:15:26.57:172,27,0	1/1:5,16:21:33.84:274,34,0	0/0:6,1:15:9.61:0,10,159	0/1:6,6:12:8.68:78,0,9	1/1:5,16:22:13.84:209,14,0	1/1:8,2:11:10.87:63,11,0	0/1:21,2:23:33.85:34,0,196	1/1:7,0:18:18.54:54,19,0	1/1:3,0:7:9.12:28,9,0	0/1:8,2:11:20.75:21,0,67	0/1:3,8:11:0.33:125,0,0	1/1:7,13:22:16.01:209,16,0	1/1:1,6:9:18.85:108,19,0
chr10	40450393	.	AT	A	1583.81	PASS	AB=0.909;AC=8;AF=0.143;AN=56;BaseQRankSum=0.231;DP=616;FS=0.000;HRun=11;HaplotypeScore=97.6721;InbreedingCoeff=0.7350;MQ=76.18;MQ0=0;MQRankSum=3.748;QD=12.88;ReadPosRankSum=2.954;VQSLOD=3.7045;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,33:43:31.94:675,32,0	0/1:9,1:10:0.58:1,0,200	0/0:17,0:17:8.47:0,8,270	0/1:17,2:19:20.74:21,0,161	0/0:9,0:25:43.01:0,43,228	0/0:3,0:15:37.33:0,37,206	0/0:5,0:23:51.42:0,51,273	0/0:24,2:26:10.96:0,11,511	0/0:5,0:14:22.59:0,23,110	0/0:23,0:23:51.13:0,51,544	0/0:17,0:18:41.93:0,42,424	0/0:3,0:11:23.01:0,23,131	0/0:13,0:27:52.31:0,52,309	0/0:9,0:20:23.37:0,23,142	0/0:9,0:24:37.60:0,38,214	0/0:9,0:18:31.76:0,32,179	0/0:7,0:29:51.56:0,52,285	0/0:25,0:25:60.15:0,60,640	0/0:27,1:30:41.19:0,41,611	0/0:24,2:27:23.19:0,23,631	0/0:23,1:24:26.94:0,27,481	1/1:4,16:20:48.41:395,48,0	0/0:4,0:17:25.97:0,26,140	0/0:5,0:15:22.76:0,23,115	1/1:2,28:30:77.84:640,78,0	0/0:25,2:27:19.88:0,20,623	0/0:28,1:30:59.21:0,59,790	0/0:8,0:8:20.99:0,21,209
chr10	40451547	.	G	GA	2528.74	PASS	AB=0.714;AC=14;AF=0.250;AN=56;BaseQRankSum=7.922;DP=552;FS=3.510;HRun=17;HaplotypeScore=94.3456;InbreedingCoeff=-0.0817;MQ=50.33;MQ0=21;MQRankSum=-6.197;QD=10.85;ReadPosRankSum=6.115;VQSLOD=2.8518;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:39:44.39:0,44,418	0/0:8,0:6:18.05:0,18,197	0/0:31,0:8:9.86:0,10,163	0/1:35,0:15:5.19:5,0,162	1/1:9,13:18:28.18:426,28,0	0/1:4,6:10:9.78:215,0,10	0/1:6,9:15:99:239,0,106	0/0:28,0:28:48.52:0,49,346	0/1:8,11:19:43.96:311,0,44	0/0:24,0:24:58.12:0,58,593	0/0:19,0:16:41.93:0,42,437	0/1:7,10:17:20.98:400,0,21	0/1:12,4:16:99:160,0,106	0/1:11,8:20:61.26:262,0,61	0/1:12,8:19:42.11:261,0,42	0/1:7,10:17:68.68:180,0,69	0/0:11,1:21:13.82:0,14,113	0/0:23,0:21:49.30:0,49,467	0/0:26,0:26:28.06:0,28,287	0/0:12,0:11:6.69:0,7,21	0/0:15,0:12:13.54:0,14,111	0/0:8,0:7:17.83:0,18,174	0/1:5,6:11:19.26:102,0,19	0/1:6,6:12:4.19:121,0,4	0/1:13,0:13:3.61:4,0,143	0/0:28,0:28:41.21:0,41,375	0/0:23,0:20:21.01:0,21,191	0/0:7,0:6:11.85:0,12,82
chr10	40451550	.	AAG	A	1170.80	PASS	AB=0.957;AC=7;AF=0.125;AN=56;BaseQRankSum=-4.038;DP=551;FS=36.923;HRun=0;HaplotypeScore=106.3913;InbreedingCoeff=0.1032;MQ=51.23;MQ0=20;MQRankSum=1.556;QD=8.80;ReadPosRankSum=-5.748;VQSLOD=0.4428;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:37:34.98:0,35,612	0/0:8,0:6:18.06:0,18,271	0/0:31,0:8:19.55:0,20,257	0/0:36,0:16:11.91:0,12,328	0/0:24,0:20:21.95:0,22,224	0/0:11,0:11:23.83:0,24,201	0/0:17,0:17:37.44:0,37,347	0/1:29,0:29:99:442,0,134	0/0:21,0:20:44.70:0,45,398	0/0:24,0:24:38.43:0,38,881	0/0:19,0:16:42.02:0,42,629	0/0:17,0:17:35.78:0,36,312	0/0:18,0:16:41.72:0,42,415	0/0:23,0:21:35.65:0,36,312	0/0:20,0:19:33.16:0,33,296	0/0:17,0:17:32.84:0,33,305	0/0:19,0:15:12.20:0,12,191	0/0:24,0:22:43.11:0,43,567	0/1:27,0:27:99:348,0,117	1/1:12,0:11:9.64:82,10,0	0/1:16,1:15:30.81:50,0,31	0/0:7,0:6:17.89:0,18,232	0/0:11,0:11:14.94:0,15,142	0/0:13,0:12:17.68:0,18,130	0/0:11,0:11:2.24:0,2,218	0/1:27,0:27:99:258,0,146	0/1:17,4:18:62.02:122,0,62	0/0:6,1:6:2.18:0,2,37
chr10	40451552	.	G	GAAA	4003.63	PASS	AB=0.985;AC=21;AF=0.375;AN=56;BaseQRankSum=-6.710;DP=552;FS=10.333;HRun=9;HaplotypeScore=110.3155;InbreedingCoeff=0.4614;MQ=52.60;MQ0=20;MQRankSum=2.383;QD=14.77;ReadPosRankSum=-5.110;VQSLOD=-0.5344;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:35:26.77:0,27,359	0/0:7,0:6:15.04:0,15,189	0/0:32,0:9:25.72:0,26,256	0/0:37,0:17:22.08:0,22,311	0/0:22,0:18:27.76:0,28,108	0/0:11,0:11:12.34:0,12,73	0/0:17,0:17:20.57:0,21,159	1/1:8,26:34:82.33:1070,82,0	0/1:21,0:20:19.95:20,0,130	0/0:24,0:24:57.06:0,57,675	0/0:18,0:15:39.12:0,39,492	0/0:18,0:18:15.24:0,15,102	0/1:17,0:16:99:121,0,112	0/1:21,0:19:86.89:87,0,90	0/0:19,0:18:12.98:0,13,159	0/1:16,0:17:20.56:21,0,132	0/1:19,0:15:5.09:5,0,79	0/0:22,0:21:36.51:0,37,402	1/1:7,20:29:73.13:866,73,0	1/1:1,12:14:17.95:206,18,0	1/1:9,8:15:15.17:193,15,0	0/0:6,0:6:12.01:0,12,149	0/0:10,0:10:11.11:0,11,85	0/1:13,0:12:9.80:63,0,10	0/1:12,0:12:19.19:19,0,133	1/1:7,20:27:18.24:682,18,0	1/1:21,0:18:43.48:415,43,0	1/1:2,5:6:12.04:237,12,0
chr10	40451879	.	A	ACG	1529.55	PASS	AB=0.976;AC=24;AF=0.429;AN=56;BaseQRankSum=4.219;DP=573;FS=69.870;HRun=0;HaplotypeScore=154.2535;InbreedingCoeff=0.8126;MQ=56.94;MQ0=8;MQRankSum=1.511;QD=6.83;ReadPosRankSum=1.983;VQSLOD=0.7944;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:68.45:0,68,678	0/0:13,0:13:17.95:0,18,166	0/0:27,0:15:39.08:0,39,408	0/0:33,0:22:60.09:0,60,661	1/1:26,1:26:14.78:118,15,0	1/1:7,0:6:11.98:99,12,0	1/1:16,0:12:23.85:204,24,0	0/0:45,0:45:99:0,127,1011	1/1:15,0:14:2.07:88,2,0	0/0:27,0:24:48.92:0,49,383	0/0:13,0:12:15.45:0,15,124	1/1:12,1:12:8.41:59,8,0	1/1:15,2:16:25.12:186,25,0	1/1:17,0:17:20.55:159,21,0	1/1:24,0:24:11.67:129,12,0	0/1:19,1:20:9.62:31,0,10	1/1:15,0:15:21.42:174,21,0	0/0:8,0:8:16.10:0,16,107	0/0:19,0:16:35.78:0,36,303	0/0:23,0:20:21.90:0,22,175	0/1:18,0:17:1.90:2,0,101	0/0:24,0:23:43.28:0,43,463	1/1:16,1:17:23.74:181,24,0	1/1:18,0:17:32.77:311,33,0	0/0:18,0:18:30.60:0,31,284	0/0:22,0:21:33.61:0,34,228	0/0:23,0:22:26.91:0,27,196	0/0:15,0:15:4.26:0,4,193
chr10	40451906	.	CAGACAG	C	2281.13	PASS	AB=0.963;AC=17;AF=0.327;AN=52;BaseQRankSum=-2.326;DP=526;FS=2.054;HRun=0;HaplotypeScore=192.9816;InbreedingCoeff=0.4112;MQ=39.86;MQ0=39;MQRankSum=5.891;QD=10.86;ReadPosRankSum=0.028;VQSLOD=3.0423;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:35,9:43:66.17:1125,66,0	0/0:11,0:11:15.05:0,15,329	./.	./.	1/1:24,0:25:6.93:35,7,0	0/0:10,0:9:0.89:0,1,2	0/1:13,0:9:15.53:18,0,16	0/0:43,0:41:69.21:0,69,491	0/1:8,0:8:0:0,0,0	0/0:28,0:24:59.83:0,60,920	0/0:11,0:11:12.04:0,12,248	0/0:9,0:8:3.01:0,3,36	0/0:13,0:12:18.07:0,18,139	0/1:10,0:11:14.76:15,0,62	1/1:19,0:19:1.94:43,2,0	0/1:19,0:21:6.61:7,0,84	0/1:9,0:9:15.49:15,0,78	0/0:12,0:12:24.08:0,24,534	0/0:15,0:10:13.35:0,13,118	0/0:22,0:19:6.44:0,6,52	0/0:26,0:22:4.22:0,4,87	1/1:18,5:22:30.19:525,30,0	1/1:15,0:15:0.45:2,0,0	0/0:9,0:9:2.98:0,3,22	1/1:17,4:21:36.59:653,37,0	0/0:30,0:28:36.49:0,36,437	0/0:25,0:25:20.82:0,21,120	0/0:12,0:15:3.88:0,4,207
chr10	40451908	.	GAC	G	646.01	PASS	AB=0.965;AC=15;AF=0.288;AN=52;BaseQRankSum=1.299;DP=522;FS=1.362;HRun=0;HaplotypeScore=182.5165;InbreedingCoeff=0.2839;MQ=39.72;MQ0=39;MQRankSum=2.706;QD=3.20;ReadPosRankSum=2.999;VQSLOD=2.9191;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:44,0:43:5.59:150,6,0	0/0:12,0:12:18.04:0,18,262	./.	./.	1/1:20,3:23:14.48:103,14,0	0/0:9,0:8:0.47:0,0,1	0/1:12,0:8:4.29:4,0,16	0/0:44,1:43:9.76:0,10,298	0/0:9,0:8:0:0,0,0	0/0:29,0:25:65.85:0,66,835	0/0:11,0:10:12.04:0,12,193	0/0:9,0:8:3.01:0,3,36	0/0:13,0:12:18.02:0,18,109	0/0:11,0:11:0.95:0,1,60	1/1:14,3:17:3.72:89,4,0	0/1:20,2:22:15.78:122,0,16	0/1:9,1:10:32.90:57,0,33	0/0:12,0:12:24.08:0,24,408	0/1:15,0:10:14.94:15,0,91	0/0:21,0:18:5.26:0,5,32	0/0:27,0:23:4.53:0,5,63	1/1:23,0:22:15.60:123,16,0	0/0:15,0:15:2.29:0,2,15	0/0:9,0:7:2.98:0,3,22	1/1:21,0:21:14.50:117,15,0	0/0:31,0:29:0.71:0,1,176	0/0:24,1:25:11.67:0,12,87	0/1:15,0:15:17.03:17,0,145
chr10	40451912	.	G	GAC	348.97	PASS	AB=1.000;AC=16;AF=0.320;AN=50;BaseQRankSum=5.352;DP=538;FS=5.395;HRun=0;HaplotypeScore=206.2331;InbreedingCoeff=0.4803;MQ=40.49;MQ0=38;MQRankSum=-1.034;QD=1.96;ReadPosRankSum=-2.820;VQSLOD=2.0038;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:40,3:42:6.87:64,7,0	0/0:10,0:10:17.96:0,18,214	./.	./.	0/0:27,0:27:13.16:0,13,104	1/1:9,0:8:2.04:6,2,0	1/1:7,0:3:2.37:9,2,0	0/0:45,0:43:99:0,99,1191	./.	0/0:26,0:23:34.39:0,34,677	0/0:9,0:8:12.04:0,12,184	0/0:10,0:9:3.01:0,3,37	0/1:18,0:17:7.08:7,0,38	0/1:16,0:16:3.98:4,0,47	0/0:19,0:19:7.32:0,7,71	0/0:26,0:26:16.13:0,16,148	0/0:12,0:12:6.09:0,6,98	0/0:13,0:13:24.08:0,24,366	0/0:19,0:16:14.51:0,15,280	0/0:20,0:17:7.08:0,7,70	0/0:27,0:23:2.90:0,3,237	1/1:21,2:22:18.52:142,19,0	1/1:14,0:14:2.72:17,3,0	0/1:7,0:5:0:0,0,0	1/1:22,1:23:15.19:183,15,0	0/0:31,0:29:48.41:0,48,788	0/0:27,0:27:15.51:0,16,399	0/1:18,0:18:65.23:65,0,114
chr10	40451928	.	CAG	C	172.54	PASS	AB=0.807;AC=10;AF=0.185;AN=54;BaseQRankSum=4.198;DP=575;FS=0.000;HRun=0;HaplotypeScore=200.0666;InbreedingCoeff=0.2232;MQ=41.44;MQ0=44;MQRankSum=-5.894;QD=1.34;ReadPosRankSum=1.028;VQSLOD=2.4871;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:80.84:0,81,1296	0/0:13,0:13:27.08:0,27,434	./.	0/0:37,1:2:5.89:0,6,67	0/0:22,3:24:8.33:0,8,24	0/0:5,7:11:0.47:0,0,1	1/1:6,1:3:2.94:18,3,0	0/0:45,0:46:99:0,117,1784	1/1:7,8:14:3.48:40,3,0	0/0:34,0:32:80.63:0,81,1293	0/0:9,0:8:15.05:0,15,260	0/1:10,2:11:27.41:27,0,45	0/1:13,3:15:23.68:38,0,24	0/0:13,1:14:14.85:0,15,38	0/1:18,5:23:1.32:1,0,69	0/1:18,9:27:36.58:154,0,37	0/1:9,3:12:18.60:19,0,94	0/0:13,0:13:30.10:0,30,497	0/0:16,0:15:33.37:0,33,577	0/0:20,0:17:15.05:0,15,255	0/0:28,0:25:32.94:0,33,570	0/0:25,0:25:42.11:0,42,641	0/1:12,5:17:0:0,0,0	0/0:6,2:6:2.98:0,3,21	0/0:22,0:22:42.14:0,42,704	0/0:26,0:26:51.81:0,52,915	0/0:26,0:26:41.73:0,42,648	0/0:14,0:14:20.63:0,21,341
chr10	40451952	.	GAC	G	4207.83	PASS	AB=0.861;AC=31;AF=0.574;AN=54;BaseQRankSum=-5.457;DP=589;FS=0.000;HRun=0;HaplotypeScore=170.3420;InbreedingCoeff=0.0600;MQ=49.02;MQ0=33;MQRankSum=5.012;QD=8.82;ReadPosRankSum=2.594;VQSLOD=2.9831;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:44,0:44:92.62:187,0,93	0/1:9,0:9:7.89:53,0,8	0/1:29,1:10:35.95:36,0,263	0/0:41,0:14:27.03:0,27,328	0/0:9,0:20:8.48:0,8,26	1/1:2,0:11:5.68:28,6,0	./.	1/1:13,24:37:71.96:690,72,0	1/1:2,0:17:5.68:28,6,0	0/1:36,0:35:68.26:184,0,68	0/1:10,0:9:19.42:19,0,53	0/1:3,0:8:2.12:19,0,2	0/1:11,0:16:21.09:32,0,21	0/0:12,0:15:24.47:0,24,81	0/0:13,0:23:18.06:0,18,60	0/1:9,0:26:2.04:97,0,2	0/1:5,0:10:8.52:19,0,9	0/1:20,0:20:35.03:69,0,35	1/1:4,16:18:45.01:498,45,0	1/1:4,17:19:21.01:232,21,0	1/1:6,25:29:15.69:392,16,0	0/1:20,0:20:22.21:128,0,22	0/1:5,0:14:0:0,0,0	0/0:5,0:8:2.37:0,2,8	0/1:22,0:22:38.77:73,0,39	1/1:4,18:22:56.46:541,56,0	1/1:2,27:28:48.15:599,48,0	1/1:1,20:19:24.05:284,24,0
chr10	40451954	.	C	CAGAG	3015.02	PASS	AB=1.000;AC=21;AF=0.389;AN=54;BaseQRankSum=8.725;DP=586;FS=4.896;HRun=0;HaplotypeScore=187.9242;InbreedingCoeff=0.7624;MQ=50.71;MQ0=33;MQRankSum=-8.808;QD=17.33;ReadPosRankSum=0.837;VQSLOD=3.3383;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:70.36:0,70,1356	0/0:9,0:9:19.33:0,19,357	0/0:35,0:12:7.15:0,7,407	0/0:42,0:16:33.06:0,33,509	1/1:17,3:19:3:73,3,0	1/1:12,0:11:7.83:73,8,0	./.	0/0:37,0:37:64.04:0,64,1227	1/1:17,0:17:6.02:92,6,0	0/0:36,0:35:83.03:0,83,1547	0/0:10,0:9:21.07:0,21,350	1/1:7,1:8:9.03:218,9,0	1/1:6,9:15:24:489,24,0	1/1:4,9:14:21.07:539,21,0	1/1:12,9:21:15.05:388,15,0	1/1:21,5:26:52.37:1013,52,0	1/1:7,2:9:7.75:237,8,0	0/0:19,1:20:33.10:0,33,547	0/0:21,0:19:3.82:0,4,368	0/0:21,0:19:20.75:0,21,183	0/0:30,0:29:20.59:0,21,361	0/0:20,0:20:35.68:0,36,718	0/0:11,0:11:0:0,0,0	1/1:7,2:8:3.01:77,3,0	0/0:22,0:22:42.14:0,42,721	0/1:23,0:23:10.29:10,0,612	0/0:30,0:29:47.25:0,47,426	0/0:21,0:19:21.52:0,22,198
chr10	40451964	.	CACAG	C	1201	PASS	AB=0.979;AC=23;AF=0.411;AN=56;BaseQRankSum=4.099;DP=610;FS=2.918;HRun=0;HaplotypeScore=187.9290;InbreedingCoeff=-0.0859;MQ=56.63;MQ0=33;MQRankSum=-4.327;QD=3.25;ReadPosRankSum=1.326;VQSLOD=2.8273;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:40,1:41:8.07:8,0,324	0/0:8,0:8:16.77:0,17,87	0/0:41,0:13:25.37:0,25,703	0/0:54,0:29:50.01:0,50,1127	0/1:20,0:19:6.28:6,0,29	1/1:12,0:12:5.68:67,6,0	0/0:5,0:5:2.99:0,3,24	0/1:35,0:35:99:191,0,336	1/1:18,0:18:6.02:68,6,0	0/1:34,1:34:59.59:60,0,365	0/0:8,0:8:17.20:0,17,107	0/1:8,0:8:46.21:56,0,46	0/1:17,0:17:36.01:120,0,36	1/1:14,0:14:2.72:79,3,0	0/1:21,0:21:20.80:25,0,21	1/1:22,0:22:26.27:352,26,0	0/1:9,0:9:39.99:40,0,66	0/0:25,0:25:30.89:0,31,164	0/0:24,0:21:15.68:0,16,270	0/1:19,2:19:93.24:93,0,95	0/0:30,0:31:41.81:0,42,219	0/1:19,1:20:74.90:75,0,145	0/0:11,0:11:2.65:0,3,24	1/1:10,0:9:1.82:5,2,0	0/1:22,1:23:25.88:26,0,125	0/1:21,0:21:60.39:60,0,192	0/0:34,0:33:61.69:0,62,372	0/1:20,1:19:37.22:37,0,60
chr10	40451966	.	CAG	C	3544.15	PASS	AB=0.993;AC=22;AF=0.393;AN=56;BaseQRankSum=-2.641;DP=624;FS=0.424;HRun=0;HaplotypeScore=167.4918;InbreedingCoeff=0.4312;MQ=57.26;MQ0=32;MQRankSum=4.381;QD=10.07;ReadPosRankSum=9.623;VQSLOD=2.0666;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:13,27:40:32.17:629,32,0	1/1:1,7:8:15.05:185,15,0	0/0:44,0:16:19.20:0,19,480	0/0:56,0:30:59.49:0,59,825	0/0:20,0:19:12.10:0,12,66	0/0:13,0:12:2.96:0,3,8	0/0:5,0:5:2.99:0,3,24	0/1:39,0:39:25.64:26,0,324	0/0:18,0:18:2.49:0,2,7	1/1:9,25:33:81.17:949,81,0	1/1:3,5:8:8.78:111,9,0	0/0:8,0:8:8.75:0,9,51	0/0:17,0:17:28.23:0,28,186	0/0:15,0:15:32.09:0,32,220	0/0:22,0:22:25.05:0,25,189	0/0:22,0:22:29:0,29,165	0/0:9,0:9:10.52:0,11,78	1/1:5,20:25:23.92:297,24,0	0/1:24,0:21:76.07:77,0,76	0/1:23,0:21:61.01:81,0,61	0/1:31,0:31:31.08:115,0,31	1/1:4,16:20:36.08:427,36,0	0/0:12,0:12:5.84:0,6,48	0/0:11,0:10:5.88:0,6,49	1/1:8,15:23:24.05:282,24,0	0/1:21,1:22:28.62:88,0,29	0/1:34,0:33:80.01:162,0,80	1/1:21,0:19:22.50:114,23,0
chr10	40452592	.	CCCATCCATCCATCTGTCCAT	C	6444.08	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=4.858;DP=694;FS=5.277;HRun=0;HaplotypeScore=387.4270;InbreedingCoeff=0.8810;MQ=70.31;MQ0=5;MQRankSum=-1.903;QD=40.79;ReadPosRankSum=0.277;VQSLOD=2.3131;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:81.28:0,81,6413	0/0:17,0:17:39.13:0,39,2676	0/0:51,0:46:89.21:0,89,4298	0/0:39,0:36:60.72:0,61,3473	0/0:11,0:10:9.03:0,9,207	0/0:19,0:18:39.60:0,40,1258	0/0:26,0:26:57.16:0,57,1444	1/1:6,20:26:56.92:803,57,0	0/0:21,0:21:57.20:0,57,1945	0/0:42,0:42:99:0,107,8554	0/0:18,0:18:48.16:0,48,3877	0/0:20,0:20:51.17:0,51,1532	0/0:22,0:21:48.15:0,48,1515	0/0:27,0:27:63.22:0,63,2041	0/0:34,0:34:75.26:0,75,2513	0/0:37,0:37:90.31:0,90,3019	0/0:19,0:19:33.11:0,33,1239	0/1:22,0:22:75.21:75,0,3676	1/1:3,13:15:39.13:1520,39,0	1/1:5,13:17:12.04:542,12,0	1/1:14,0:14:9.02:176,9,0	0/0:29,0:29:87.30:0,87,6996	0/0:17,0:17:33.10:0,33,976	0/0:25,0:25:27.09:0,27,801	0/0:23,0:23:57.18:0,57,4465	1/1:8,12:20:30.03:947,30,0	1/1:3,22:25:27.09:1404,27,0	1/1:5,12:17:18.06:977,18,0
chr10	40452607	.	GTCCATCCA	G	11064.37	PASS	AB=0.912;AC=32;AF=0.571;AN=56;BaseQRankSum=13.493;DP=669;FS=9.321;HRun=0;HaplotypeScore=202.1488;InbreedingCoeff=0.6660;MQ=54.17;MQ0=7;MQRankSum=-14.791;QD=29.98;ReadPosRankSum=4.217;VQSLOD=3.2611;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:89.97:0,90,3353	0/0:15,0:15:30.10:0,30,1145	0/0:52,0:45:60.17:0,60,1902	0/0:39,0:33:56.76:0,57,1699	1/1:4,6:9:2.88:78,3,0	1/1:8,15:22:26.95:772,27,0	1/1:11,13:24:21.07:489,21,0	0/1:20,0:20:12.36:12,0,280	1/1:10,15:25:30.10:783,30,0	0/0:42,0:42:99:0,113,4040	0/0:19,0:19:51.18:0,51,1944	1/1:2,18:20:48.16:1180,48,0	1/1:5,17:21:42.14:1084,42,0	1/1:9,16:25:39.13:996,39,0	1/1:7,27:34:57.20:1455,57,0	1/1:9,27:36:63.21:1615,63,0	1/1:12,4:16:24.08:615,24,0	0/0:21,0:21:53.55:0,54,1858	1/1:16,0:13:16.08:346,16,0	0/1:14,0:13:30.81:100,0,31	0/0:15,0:15:1.24:0,1,3	0/0:34,0:34:99:0,99,3661	1/1:4,10:14:15.05:385,15,0	0/1:11,13:24:7.95:215,0,8	0/0:24,0:24:66.20:0,66,2385	0/1:12,0:12:23.80:185,0,24	1/1:22,0:22:27:428,27,0	1/1:12,0:12:18.06:326,18,0
chr10	40452612	.	T	TGA	340.15	PASS	AB=0.929;AC=4;AF=0.071;AN=56;BaseQRankSum=5.433;DP=667;FS=0.000;HRun=0;HaplotypeScore=173.7473;InbreedingCoeff=-0.0979;MQ=51.04;MQ0=7;MQRankSum=-1.464;QD=5.23;ReadPosRankSum=1.343;VQSLOD=3.0800;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:41:99:0,108,1753	0/0:15,0:15:45.14:0,45,710	0/0:53,0:46:99:0,132,2099	0/0:39,0:32:96.24:0,96,1505	0/0:9,0:8:5.94:0,6,43	0/0:22,0:22:39.52:0,40,341	0/0:20,0:20:35.88:0,36,406	0/1:22,0:22:55.96:56,0,188	0/0:22,0:22:36.50:0,36,467	0/0:44,0:44:99:0,123,2005	0/0:18,0:18:54.18:0,54,881	0/0:19,0:19:50.48:0,50,380	0/0:22,0:21:47.48:0,47,360	0/0:24,0:24:59.61:0,60,577	0/0:33,0:33:71.35:0,71,633	0/0:36,0:36:89.26:0,89,845	0/0:16,0:16:41.87:0,42,499	0/0:22,0:22:66.02:0,66,1010	0/1:16,0:13:35.86:199,0,36	0/0:14,0:13:7.51:0,8,102	0/1:9,6:15:48.45:48,0,75	0/0:36,0:36:99:0,108,1757	0/0:13,0:13:23.85:0,24,247	0/0:23,0:23:20.95:0,21,236	0/0:25,0:25:72.25:0,72,1174	0/1:12,0:12:27.86:145,0,28	0/0:23,0:23:4.67:0,5,137	0/0:12,0:12:1.54:0,2,57
chr10	40452733	.	A	ACTAT	10964.24	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=-4.290;DP=836;FS=1.920;HRun=0;HaplotypeScore=180.2664;InbreedingCoeff=0.9122;MQ=77.85;MQ0=2;MQRankSum=-3.196;QD=24.92;ReadPosRankSum=-4.166;VQSLOD=4.0066;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:8,29:38:30.10:741,30,0	1/1:6,9:15:15.05:335,15,0	0/0:40,0:33:48.53:0,49,737	0/0:38,0:30:36.08:0,36,542	0/0:39,0:39:92.63:0,93,1327	0/0:20,0:20:44.89:0,45,707	0/0:23,0:23:52.04:0,52,734	1/1:38,0:36:69.14:1374,69,0	0/0:25,0:25:44.61:0,45,821	1/1:11,28:39:84.29:1976,84,0	1/1:7,12:21:36.12:755,36,0	0/0:30,0:30:81.24:0,81,1265	0/0:39,0:39:67.72:0,68,969	0/0:26,0:26:30.37:0,30,680	0/1:34,0:34:29.92:30,0,755	0/0:30,0:30:10.37:0,10,760	0/0:30,0:30:50.75:0,51,659	1/1:9,18:27:14.37:443,14,0	1/1:23,0:23:36.06:693,36,0	1/1:34,0:34:74.54:1052,75,0	1/1:25,0:25:12.04:255,12,0	1/1:7,18:28:33.11:658,33,0	0/0:27,0:27:66.23:0,66,1103	0/0:27,0:27:60.18:0,60,961	1/1:6,14:22:18.06:429,18,0	1/1:33,0:32:77.45:1259,77,0	1/1:32,1:34:26.73:334,27,0	1/1:29,0:29:41.89:631,42,0
chr10	40452747	.	TATTC	T	3901.34	PASS	AB=1.000;AC=16;AF=0.286;AN=56;BaseQRankSum=9.488;DP=834;FS=1.542;HRun=0;HaplotypeScore=194.7105;InbreedingCoeff=0.6347;MQ=63.58;MQ0=14;MQRankSum=-0.888;QD=14.03;ReadPosRankSum=-0.811;VQSLOD=3.0459;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:45.26:0,45,963	0/0:15,0:15:10.07:0,10,386	0/0:41,0:21:51.41:0,51,478	0/0:30,0:16:29.16:0,29,312	0/0:42,0:42:99:0,100,1305	0/0:19,0:19:44.07:0,44,412	0/0:24,0:24:55.89:0,56,578	0/1:35,0:33:85.43:289,0,85	0/0:27,0:27:60.07:0,60,775	0/1:39,0:39:99:301,0,736	0/1:17,0:17:42.54:43,0,404	0/0:39,0:39:99:0,108,2166	0/0:38,0:38:83.81:0,84,1328	0/0:29,0:29:63.04:0,63,943	0/0:32,0:32:88.62:0,89,1270	0/0:34,0:34:66.10:0,66,911	0/0:31,0:31:72:0,72,1050	0/0:27,0:27:18.13:0,18,581	1/1:4,14:17:13.87:358,14,0	1/1:3,28:31:74.28:835,74,0	1/1:2,22:24:14.81:99,15,0	0/1:23,0:23:64.87:65,0,292	0/0:29,0:28:78.13:0,78,1262	0/0:32,0:32:81.68:0,82,1700	0/0:24,0:24:30.10:0,30,605	1/1:4,28:30:86.50:978,86,0	1/1:2,30:32:26.87:357,27,0	1/1:2,25:26:44.95:578,45,0
chr10	40452789	.	T	TCCAC	3137.66	PASS	AB=0.920;AC=8;AF=0.143;AN=56;BaseQRankSum=2.940;DP=838;FS=8.547;HRun=0;HaplotypeScore=175.1829;InbreedingCoeff=0.0983;MQ=66.82;MQ0=8;MQRankSum=1.184;QD=13.88;ReadPosRankSum=2.233;VQSLOD=2.6195;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:56:99:0,121,1160	0/0:19,0:19:41.90:0,42,451	0/0:30,0:22:49.01:0,49,504	0/0:34,0:22:35.93:0,36,411	0/1:25,0:25:99:473,0,164	0/0:28,0:28:44.22:0,44,314	0/0:23,0:23:2:0,2,307	0/0:30,0:29:78.01:0,78,698	0/1:36,0:36:32.65:33,0,432	0/0:38,0:38:98.67:0,99,1136	0/0:19,0:19:39.93:0,40,415	0/0:38,0:38:99:0,114,1736	1/1:1,36:39:15.59:945,16,0	0/1:2,23:26:29.56:619,0,30	0/1:36,0:36:99:528,0,298	0/1:29,0:29:99:246,0,227	0/1:35,0:35:99:435,0,247	0/0:30,0:30:28.73:0,29,575	0/0:15,0:14:35.33:0,35,354	0/0:28,0:27:57.02:0,57,616	0/0:29,0:29:38.77:0,39,299	0/0:35,0:35:80.71:0,81,729	0/0:22,0:21:63.06:0,63,882	0/0:42,0:42:99:0,114,1608	0/0:28,0:28:58.67:0,59,632	0/0:32,0:32:81.37:0,81,826	0/0:20,0:20:38.89:0,39,366	0/0:16,0:16:37.45:0,37,390
chr10	40453506	.	AC	A	5719.34	PASS	AB=0.800;AC=21;AF=0.375;AN=56;BaseQRankSum=8.183;DP=533;FS=2.487;HRun=5;HaplotypeScore=55.6384;InbreedingCoeff=0.9212;MQ=77.37;MQ0=0;MQRankSum=-0.887;QD=26.85;ReadPosRankSum=-2.599;VQSLOD=3.5912;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,29:31:69.20:779,69,0	0/1:3,1:4:21.97:22,0,111	0/0:25,0:23:50.26:0,50,643	0/0:23,0:22:15.93:0,16,457	0/0:33,0:33:93.21:0,93,1231	0/0:20,0:20:57.18:0,57,761	0/0:9,0:9:27.06:0,27,337	1/1:4,29:33:87.07:892,87,0	0/0:23,0:23:69.23:0,69,928	0/0:13,0:13:36.11:0,36,476	0/0:13,0:13:38.92:0,39,504	0/0:17,0:17:48.16:0,48,649	0/0:11,0:11:24.08:0,24,328	0/0:16,0:16:45.15:0,45,614	0/0:14,0:14:33:0,33,408	0/0:16,0:16:42.14:0,42,572	0/0:26,0:26:69.18:0,69,905	0/0:25,0:25:63.21:0,63,853	1/1:2,18:20:48.06:491,48,0	1/1:0,31:31:90.05:950,90,0	1/1:3,15:18:36.10:408,36,0	1/1:0,8:8:20.87:191,21,0	0/0:23,0:23:69.21:0,69,911	0/0:13,0:12:32.83:0,33,402	1/1:0,21:21:45.13:510,45,0	1/1:1,21:22:63.05:694,63,0	1/1:0,13:13:36.10:408,36,0	1/1:0,12:12:33.09:374,33,0
chr10	40453602	.	CT	C	710.59	PASS	AB=0.962;AC=20;AF=0.357;AN=56;BaseQRankSum=3.086;DP=510;FS=0.000;HRun=11;HaplotypeScore=94.2361;InbreedingCoeff=0.6766;MQ=55.26;MQ0=22;MQRankSum=-0.316;QD=3.93;ReadPosRankSum=4.698;VQSLOD=0.4612;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:27:35.99:0,36,185	1/1:12,0:12:21.04:151,21,0	0/0:29,0:7:11.97:0,12,104	0/0:30,0:11:9.65:0,10,109	1/1:11,0:25:7.23:57,7,0	0/0:7,0:6:1.35:0,1,3	0/0:12,0:9:6.38:0,6,42	0/0:24,0:27:9.10:0,9,111	0/0:15,0:15:3.96:0,4,16	1/1:5,14:18:41.06:314,41,0	1/1:6,9:15:22.38:151,22,0	0/0:13,0:13:5.02:0,5,15	0/1:11,0:12:4.54:5,0,20	0/1:12,0:12:6.97:7,0,8	1/1:9,0:20:29.15:84,29,0	1/1:2,0:9:7.45:31,7,0	1/1:10,0:17:7:42,7,0	1/1:20,1:21:5.97:49,6,0	0/0:19,0:19:29.41:0,29,147	0/0:15,0:16:19.76:0,20,105	0/0:13,0:12:18.36:0,18,83	0/0:10,0:11:17.21:0,17,99	0/0:14,0:13:3.79:0,4,24	1/1:13,0:12:1.66:6,2,0	0/0:22,0:23:26.95:0,27,149	0/0:20,0:19:12.70:0,13,191	0/0:29,0:30:34.90:0,35,170	0/0:18,0:17:32.79:0,33,188
chr10	40453613	.	TC	T	4137.64	PASS	AB=0.988;AC=48;AF=0.857;AN=56;BaseQRankSum=-1.025;DP=503;FS=0.000;HRun=1;HaplotypeScore=76.0621;InbreedingCoeff=0.0968;MQ=50.07;MQ0=32;MQRankSum=1.102;QD=8.64;ReadPosRankSum=3.043;VQSLOD=1.0747;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:27:33.41:67,0,33	1/1:9,0:9:10.35:75,10,0	0/0:23,1:4:11.61:0,12,71	0/1:28,1:10:22.82:23,0,58	1/1:26,1:26:37.40:201,37,0	1/1:11,0:10:26.78:199,27,0	1/1:10,0:7:16.91:116,17,0	1/1:25,1:25:33.05:282,33,0	1/1:16,0:16:39.73:267,40,0	1/1:20,1:20:27.57:158,28,0	1/1:17,0:16:30.06:175,30,0	1/1:16,0:16:33.04:310,33,0	1/1:12,0:11:20.07:182,20,0	1/1:12,0:11:29.78:222,30,0	1/1:23,0:22:39.64:172,40,0	1/1:11,0:10:18.85:79,19,0	1/1:17,0:15:25.53:130,26,0	1/1:3,19:22:6.85:36,7,0	0/1:17,0:16:4.19:83,0,4	1/1:13,1:14:11.35:183,11,0	1/1:13,0:10:5.89:113,6,0	1/1:10,0:10:0.12:108,0,0	1/1:13,0:12:14.70:180,15,0	1/1:14,0:11:20.85:179,21,0	0/1:21,0:21:6.31:169,0,6	0/1:22,1:20:32.60:44,0,33	1/1:28,0:25:36.97:276,37,0	0/1:19,0:16:2.11:110,0,2
chr10	40455098	.	A	ACGCGTGCGCGCG	847.66	PASS	AB=0.882;AC=10;AF=0.192;AN=52;BaseQRankSum=3.781;DP=472;FS=7.692;HRun=0;HaplotypeScore=189.0381;InbreedingCoeff=0.6526;MQ=61.67;MQ0=7;MQRankSum=-4.697;QD=8.74;ReadPosRankSum=-2.425;VQSLOD=1.3574;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:48:42.13:0,42,1385	0/0:3,0:3:9.03:0,9,253	0/0:11,0:7:5.85:0,6,104	0/0:11,0:5:3.01:0,3,31	0/1:16,3:20:0:0,0,0	0/0:12,0:12:13.46:0,13,323	0/0:30,0:28:42.14:0,42,1016	0/0:20,0:20:48.16:0,48,1391	./.	0/0:16,0:16:28.12:0,28,635	0/0:12,0:12:27.07:0,27,582	1/1:7,0:8:0.88:2,1,0	0/1:7,0:7:0.03:0,0,0	./.	0/0:12,0:12:0:0,0,0	1/1:7,0:9:8.77:272,9,0	1/1:21,0:20:22.39:684,22,0	0/0:27,0:27:59.08:0,59,1733	0/0:23,0:23:32.16:0,32,1287	0/0:11,0:10:21.06:0,21,694	0/0:48,0:48:96.30:0,96,3411	0/0:22,0:21:42.14:0,42,1391	0/1:13,0:13:0.05:0,0,0	0/1:9,0:16:0.02:0,0,0	0/0:13,0:13:15.05:0,15,501	0/0:16,0:16:36.66:0,37,1179	0/0:17,0:17:29.75:0,30,753	0/0:4,0:4:9.03:0,9,245
chr10	40455102	.	GCACACACACACACACACACACACA	G	1422.30	PASS	AB=1.000;AC=7;AF=0.146;AN=48;BaseQRankSum=4.516;DP=451;FS=11.893;HRun=0;HaplotypeScore=220.7961;InbreedingCoeff=0.6263;MQ=54.74;MQ0=10;MQRankSum=-3.378;QD=14.51;ReadPosRankSum=1.860;VQSLOD=1.5704;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:26,24:49:6.02:240,6,0	0/0:4,0:4:12.04:0,12,1055	./.	./.	0/0:11,0:10:0.47:0,0,1	0/0:14,0:13:3.48:0,3,262	0/0:29,0:27:33.11:0,33,1535	0/0:19,0:19:15.05:0,15,795	0/0:12,0:12:6.02:0,6,236	0/0:15,0:16:28.65:0,29,2083	0/0:12,0:13:18.06:0,18,1128	0/0:10,0:9:1.55:0,2,4	./.	./.	0/0:7,0:6:0.47:0,0,1	0/0:7,0:7:9.03:0,9,537	0/0:16,0:13:10.54:0,11,358	0/0:19,0:30:66.23:0,66,5284	0/0:21,0:21:35.27:0,35,2209	0/0:11,0:10:15.05:0,15,1002	0/0:40,0:54:52.66:0,53,3155	1/1:10,11:21:18.06:1109,18,0	0/0:13,0:13:0.39:0,0,1	0/1:13,0:13:0:0,0,0	1/1:5,7:12:3.48:189,3,0	0/0:15,0:18:42.14:0,42,2675	0/0:9,0:17:24:0,24,1579	0/0:3,0:5:8.96:0,9,477
chr10	40455104	.	A	ACACGCACG	854.96	PASS	AB=1.000;AC=13;AF=0.260;AN=50;BaseQRankSum=4.359;DP=444;FS=4.682;HRun=0;HaplotypeScore=141.9821;InbreedingCoeff=0.4822;MQ=53.65;MQ0=11;MQRankSum=0.145;QD=6.79;ReadPosRankSum=-1.758;VQSLOD=2.2119;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:47:36.06:0,36,511	0/0:4,0:4:5.38:0,5,156	0/0:8,0:4:2.59:0,3,10	0/0:7,0:1:2.22:0,2,7	0/1:13,0:12:0.05:0,0,0	1/1:15,0:14:14.98:170,15,0	1/1:30,0:28:40.33:607,40,0	0/0:18,0:18:37.66:0,38,562	./.	0/0:15,0:14:31.75:0,32,504	0/1:14,0:14:11.34:11,0,304	1/1:8,0:7:0.47:1,0,0	./.	./.	0/1:10,0:8:0.11:0,0,0	1/1:8,0:8:8.89:119,9,0	0/1:18,0:14:7.51:78,0,8	0/0:29,0:29:25.39:0,25,1110	0/0:22,0:21:48.20:0,48,703	0/0:10,0:9:0.32:0,0,277	0/0:56,0:55:93.29:0,93,1529	0/0:22,0:21:39.13:0,39,706	0/1:10,0:10:0:0,0,0	0/0:8,0:8:0.87:0,1,2	0/0:12,0:12:12.04:0,12,214	0/0:18,0:18:3.48:0,3,474	0/0:16,0:16:24.28:0,24,387	0/0:5,0:5:11.15:0,11,127
chr10	40455149	.	CACAT	C	1785.47	PASS	AB=0.931;AC=26;AF=0.464;AN=56;BaseQRankSum=5.091;DP=534;FS=19.349;HRun=0;HaplotypeScore=135.6060;InbreedingCoeff=0.4108;MQ=59.46;MQ0=11;MQRankSum=0.946;QD=5.44;ReadPosRankSum=2.858;VQSLOD=1.5549;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:43:29.97:0,30,276	0/0:7,0:7:10.49:0,10,95	0/0:18,0:9:23.75:0,24,182	0/0:17,0:12:4.74:0,5,127	1/1:19,0:18:12.10:82,12,0	1/1:18,0:17:32.72:282,33,0	1/1:38,0:36:24.41:572,24,0	0/0:33,0:32:89.66:0,90,759	0/1:8,0:8:5.85:97,0,6	0/0:23,0:22:65.76:0,66,602	0/1:12,0:12:16.86:17,0,95	0/1:9,0:8:0:0,0,0	1/1:6,0:6:8.93:66,9,0	0/1:0,9:9:0:0,0,0	1/1:17,0:15:18.24:134,18,0	1/1:12,0:10:0.55:58,1,0	1/1:30,0:27:34.74:355,35,0	0/1:34,0:34:4.70:5,0,419	0/0:16,0:16:42.18:0,42,349	0/0:8,0:8:1.95:0,2,112	0/1:48,0:47:4.15:4,0,482	0/1:17,0:17:28.30:42,0,28	1/1:15,0:15:0.31:1,0,0	1/1:21,0:21:26.51:208,27,0	0/0:12,0:12:1.28:0,1,63	0/0:15,0:15:11.17:0,11,213	0/1:14,0:14:35.60:36,0,76	0/0:13,0:13:16.23:0,16,242
chr10	40455151	.	CAT	C	2024.08	PASS	AB=1.000;AC=22;AF=0.407;AN=54;BaseQRankSum=2.983;DP=533;FS=18.986;HRun=0;HaplotypeScore=120.2467;InbreedingCoeff=0.8382;MQ=59.81;MQ0=11;MQRankSum=1.736;QD=9.28;ReadPosRankSum=0.935;VQSLOD=2.2779;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:45:40.91:0,41,311	0/0:8,0:8:10.40:0,10,77	0/0:19,0:10:25.15:0,25,200	0/0:17,0:12:9.23:0,9,136	1/1:17,0:17:17.59:130,18,0	1/1:18,0:17:32.68:267,33,0	1/1:38,0:36:84.99:703,85,0	0/0:33,0:32:89.66:0,90,759	1/1:8,0:8:12.20:152,12,0	0/0:23,0:22:37.27:0,37,472	0/0:12,0:12:21.72:0,22,147	./.	1/1:6,0:6:8.93:66,9,0	0/1:9,0:9:0:0,0,0	1/1:17,0:15:23.76:183,24,0	1/1:9,0:7:10.04:91,10,0	1/1:28,1:27:55.45:415,55,0	0/1:32,0:32:5.61:6,0,300	0/0:17,0:17:33.65:0,34,327	0/0:11,0:11:25.24:0,25,183	0/0:48,0:47:82.17:0,82,606	0/0:18,0:17:14.70:0,15,70	1/1:6,8:14:0.64:2,1,0	1/1:21,0:21:26.67:208,27,0	0/0:12,0:12:10.54:0,11,77	0/0:16,0:16:32.66:0,33,262	0/0:14,0:14:21.11:0,21,133	0/0:13,0:13:38.08:0,38,287
chr10	40455517	.	GTTCT	G	1275.01	PASS	AB=0.924;AC=24;AF=0.444;AN=54;BaseQRankSum=3.664;DP=408;FS=24.578;HRun=0;HaplotypeScore=69.2917;InbreedingCoeff=-0.2209;MQ=41.62;MQ0=54;MQRankSum=1.686;QD=4.05;ReadPosRankSum=2.322;VQSLOD=-0.3418;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:30:28.37:0,28,447	0/0:12,0:10:21.15:0,21,321	0/0:1,0:1:1.55:0,2,4	./.	0/1:22,2:21:81.50:104,0,82	0/1:23,0:18:43.09:145,0,43	0/1:9,1:7:23.39:26,0,23	0/1:21,0:19:31.21:31,0,145	0/1:12,0:10:10.64:82,0,11	0/0:9,0:8:23.97:0,24,291	0/0:15,0:11:16.97:0,17,225	0/1:13,0:13:2.79:113,0,3	1/1:6,0:7:17.78:128,18,0	0/1:6,4:9:4.83:71,0,5	0/1:9,0:8:13.03:66,0,13	0/1:9,3:11:18.25:45,0,18	0/1:24,0:16:21.98:117,0,22	0/1:21,0:15:7.96:8,0,264	0/1:19,0:16:7.89:8,0,117	0/1:12,0:13:54.13:104,0,54	0/1:7,0:4:5.10:9,0,5	0/1:6,0:6:6.05:6,0,56	0/1:12,1:15:29.50:105,0,29	0/1:8,5:10:1.04:37,0,1	0/0:16,0:14:23.48:0,23,242	1/1:14,0:14:6.27:105,6,0	1/1:20,0:19:5.61:99,6,0	0/1:16,0:10:2.08:22,0,2
chr10	40455925	.	TCACATGTGTTAAACA	T	8671.60	PASS	AB=0.756;AC=8;AF=0.143;AN=56;BaseQRankSum=12.321;DP=694;FS=1.572;HRun=0;HaplotypeScore=299.5803;InbreedingCoeff=0.7081;MQ=82.58;MQ0=1;MQRankSum=-12.956;QD=63.30;ReadPosRankSum=4.020;VQSLOD=4.0467;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,108,7744	0/0:16,0:16:42.14:0,42,2458	0/0:23,0:23:63.22:0,63,3652	0/0:25,0:24:69.20:0,69,3847	1/1:6,20:26:39.07:1723,39,0	0/0:19,0:19:57.20:0,57,3939	0/0:18,0:18:54.19:0,54,3546	0/0:32,0:32:90.31:0,90,5826	0/0:26,0:26:75.26:0,75,5309	0/0:30,0:30:87.29:0,87,5874	0/0:16,0:16:45.14:0,45,2780	0/0:22,0:22:66.23:0,66,4667	0/0:18,0:18:51.18:0,51,3478	0/0:25,0:25:72.25:0,72,5041	1/1:6,22:28:60.21:2675,60,0	0/1:6,26:32:99:2874,0,155	1/1:11,16:27:30.10:1338,30,0	0/0:21,0:21:57.20:0,57,3838	0/0:25,0:25:72.25:0,72,4509	0/0:25,0:25:69.22:0,69,4597	0/0:37,0:37:99:0,108,7457	0/0:26,0:26:78.27:0,78,5331	0/0:23,0:23:63.20:0,63,4464	0/1:23,1:24:61.50:61,0,4189	0/0:18,0:18:51.18:0,51,3392	0/0:31,0:31:90.31:0,90,6409	0/0:28,0:28:84.29:0,84,6113	0/0:15,0:15:45.15:0,45,3164
chr10	40456274	.	CA	C	5491.43	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=14.410;DP=599;FS=1.448;HRun=9;HaplotypeScore=62.5482;InbreedingCoeff=0.9842;MQ=70.38;MQ0=1;MQRankSum=1.961;QD=22.23;ReadPosRankSum=3.393;VQSLOD=5.7543;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,114,1306	0/0:6,0:6:18.05:0,18,208	0/0:13,0:12:11.19:0,11,87	0/0:13,1:13:9.84:0,10,118	1/1:6,30:36:84.04:769,84,0	1/1:0,20:20:57.03:522,57,0	1/1:1,15:16:39.02:357,39,0	0/0:26,0:26:78.23:0,78,900	1/1:1,25:26:72.04:659,72,0	0/0:23,0:23:63.19:0,63,725	0/0:20,0:20:60.18:0,60,692	1/1:1,18:19:45.02:412,45,0	1/1:2,15:17:42.02:384,42,0	1/1:1,11:12:30.01:275,30,0	1/1:4,24:28:57.03:522,57,0	1/1:1,23:24:60.03:549,60,0	1/1:2,21:23:57.03:522,57,0	0/0:21,1:22:26.69:0,27,546	0/0:23,0:23:60.17:0,60,683	0/0:37,0:37:90.27:0,90,1036	0/0:11,0:11:30.01:0,30,308	0/0:11,0:11:27.07:0,27,302	1/1:1,18:19:41.89:384,42,0	1/1:1,6:7:15:137,15,0	0/0:28,0:28:71.09:0,71,851	0/0:27,0:27:69.20:0,69,788	0/0:29,0:29:75.22:0,75,863	0/0:19,0:19:54.11:0,54,591
chr10	40457478	.	A	ACTGTTTC	6945.91	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-6.612;DP=704;FS=0.488;HRun=0;HaplotypeScore=152.9233;InbreedingCoeff=0.9906;MQ=75.18;MQ0=0;MQRankSum=-12.980;QD=51.45;ReadPosRankSum=-3.423;VQSLOD=4.1878;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:78.21:0,78,1678	0/0:6,0:6:12.04:0,12,280	0/0:19,0:18:30.09:0,30,549	0/0:23,0:23:33.10:0,33,665	0/0:26,0:26:60.21:0,60,1354	1/1:8,12:21:45.15:1544,45,0	1/1:19,11:32:39.13:1408,39,0	0/0:29,0:29:45.15:0,45,1055	1/1:18,13:31:45.15:1579,45,0	0/0:32,0:32:54.18:0,54,1215	0/0:13,0:13:33.11:0,33,770	0/0:21,0:21:45.15:0,45,1058	1/1:8,12:21:42.14:1413,42,0	1/1:17,11:30:30.08:1002,30,0	0/0:22,0:22:57.20:0,57,1338	0/0:17,0:16:45.15:0,45,1058	0/0:31,0:31:66.21:0,66,1477	0/0:30,0:30:66.23:0,66,1520	0/0:21,0:21:18.06:0,18,422	0/0:20,0:20:45.15:0,45,1038	0/0:51,0:51:99:0,123,2757	0/0:32,0:32:72.25:0,72,1692	0/0:24,0:24:57.20:0,57,1339	0/0:28,0:28:63.18:0,63,1386	0/0:17,0:17:45.15:0,45,1053	0/0:30,0:30:63.22:0,63,1461	0/0:22,0:22:51.18:0,51,1191	0/0:11,0:11:33.11:0,33,767
chr10	40457954	.	CA	C	9053.51	PASS	AB=0.762;AC=44;AF=0.786;AN=56;BaseQRankSum=-6.495;DP=602;FS=1.089;HRun=11;HaplotypeScore=73.5559;InbreedingCoeff=0.7989;MQ=69.65;MQ0=0;MQRankSum=1.024;QD=16.83;ReadPosRankSum=2.686;VQSLOD=5.8817;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,49:59:92.89:959,93,0	0/0:2,0:7:17.25:0,17,103	0/1:15,1:14:3.84:4,0,102	0/0:9,0:9:5.95:0,6,42	1/1:3,13:18:40:307,40,0	1/1:2,12:15:35:277,35,0	1/1:2,15:17:38.95:320,39,0	1/1:7,25:34:81.59:633,82,0	1/1:4,21:25:59.92:492,60,0	0/0:6,0:22:57.26:0,57,325	0/0:2,0:11:28.95:0,29,166	1/1:4,19:23:44.93:369,45,0	1/1:1,0:22:38.70:112,39,0	1/1:2,0:24:40.72:118,41,0	1/1:2,21:24:58.97:474,59,0	1/1:3,14:20:45:338,45,0	1/1:3,23:26:65.92:542,66,0	0/0:3,0:15:28.59:0,29,152	1/1:4,15:19:41.93:345,42,0	1/1:2,11:14:31.91:244,32,0	1/1:3,20:23:24.95:411,25,0	1/1:1,15:17:43.99:351,44,0	1/1:4,16:20:44.78:368,45,0	1/1:5,24:29:65.91:542,66,0	1/1:2,11:13:26.97:222,27,0	1/1:1,37:39:99:865,107,0	1/1:6,27:34:82.52:656,83,0	0/1:2,5:7:14.01:105,0,14
chr10	40458315	.	AATCAATCT	A	3111.94	PASS	AB=0.980;AC=22;AF=0.393;AN=56;BaseQRankSum=-8.571;DP=660;FS=0.834;HRun=0;HaplotypeScore=237.7173;InbreedingCoeff=0.7640;MQ=64.75;MQ0=3;MQRankSum=6.301;QD=12.16;ReadPosRankSum=2.604;VQSLOD=2.5362;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:18.95:0,19,108	1/1:10,0:10:6.02:76,6,0	0/0:30,0:24:19.99:0,20,216	0/1:17,0:14:6.82:7,0,58	0/0:40,0:33:84.09:0,84,570	0/0:21,0:21:41.99:0,42,442	0/0:20,0:20:44.96:0,45,387	1/1:29,0:28:56.96:506,57,0	0/0:31,0:31:62.83:0,63,783	1/1:23,0:23:32.81:356,33,0	1/1:15,0:15:38.90:313,39,0	0/0:17,0:17:30.83:0,31,257	0/0:29,0:28:57.84:0,58,489	0/0:28,0:26:62.55:0,63,599	0/0:28,0:27:63.58:0,64,437	0/0:39,0:39:98.04:0,98,757	0/0:29,0:29:63.66:0,64,450	1/1:16,0:16:38.80:303,39,0	1/1:27,0:26:31.91:326,32,0	1/1:6,13:19:8.83:74,9,0	1/1:36,0:36:77.91:745,78,0	0/0:14,0:14:4:0,4,23	0/0:14,0:14:27:0,27,237	0/0:26,0:25:44.16:0,44,378	0/0:19,0:19:8.71:0,9,30	0/1:23,1:24:99:403,0,111	1/1:2,23:25:2.74:76,3,0	1/1:2,13:15:6.02:135,6,0
chr10	40458319	.	AATCT	A	1451.33	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=2.046;DP=649;FS=3.357;HRun=0;HaplotypeScore=207.6648;InbreedingCoeff=0.7759;MQ=63.70;MQ0=5;MQRankSum=-2.959;QD=16.13;ReadPosRankSum=-2.849;VQSLOD=3.0314;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,5:18:45.04:801,45,0	0/0:10,0:10:8.62:0,9,65	0/0:32,0:24:44.84:0,45,901	0/0:17,0:13:6.29:0,6,288	0/0:38,0:31:74.80:0,75,1285	0/0:20,0:20:54.15:0,54,1224	0/0:21,0:21:63.19:0,63,1388	0/0:26,0:25:65.93:0,66,609	0/0:30,0:30:81.26:0,81,1909	0/0:21,0:21:27.14:0,27,384	0/0:15,0:15:42.03:0,42,411	0/0:17,0:17:48.14:0,48,993	0/0:31,0:30:79.29:0,79,1234	0/0:28,0:26:74.23:0,74,1141	0/0:29,0:28:70.79:0,71,1268	0/0:39,0:39:99:0,108,1871	0/0:29,0:29:37.70:0,38,932	0/0:15,0:15:28.18:0,28,499	0/0:24,0:23:20.12:0,20,608	0/0:17,0:17:12.40:0,12,501	0/0:34,0:34:27.47:0,27,852	1/1:0,14:14:29.93:438,30,0	0/0:15,0:15:33.11:0,33,776	0/0:26,0:25:63.07:0,63,1336	1/1:0,19:19:18.06:321,18,0	0/0:24,0:24:48.38:0,48,753	1/1:23,0:22:2.99:24,3,0	0/1:15,0:15:15.77:22,0,16
chr10	40458327	.	AATCTATCAATCT	A	3129.04	PASS	AB=1.000;AC=20;AF=0.357;AN=56;BaseQRankSum=-8.535;DP=631;FS=0.808;HRun=0;HaplotypeScore=271.1320;InbreedingCoeff=0.3763;MQ=56.86;MQ0=10;MQRankSum=5.850;QD=11.46;ReadPosRankSum=2.255;VQSLOD=2.3831;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:20:20.75:0,21,128	1/1:0,10:10:5.89:116,6,0	0/0:30,0:16:20.51:0,21,219	0/1:14,0:8:6.82:7,0,58	0/0:37,0:30:84.09:0,84,570	0/0:16,0:16:42.01:0,42,485	0/0:22,0:21:53.99:0,54,584	1/1:23,0:22:56.92:506,57,0	0/0:27,0:27:62.84:0,63,869	1/1:6,17:22:48.08:713,48,0	1/1:15,0:15:38.90:313,39,0	0/0:14,0:14:32.96:0,33,307	0/0:30,0:29:77.30:0,77,798	0/0:29,0:27:71.94:0,72,912	0/0:25,0:24:66.57:0,67,504	0/0:37,0:37:99:0,101,771	0/0:29,0:29:68:0,68,519	1/1:16,0:16:38.83:390,39,0	1/1:20,0:19:32.94:310,33,0	0/1:15,0:15:22.47:22,0,60	0/1:35,0:35:74.50:534,0,75	0/1:15,0:15:14.98:15,0,15	0/0:18,0:18:26.97:0,27,237	0/0:23,0:22:53.61:0,54,423	0/1:24,0:24:15.56:25,0,16	0/1:24,0:24:99:300,0,298	0/1:25,0:24:26.35:26,0,117	0/1:14,0:14:46.22:46,0,55
chr10	40458377	.	TCTATCTATCTATCTATCTACCTAC	T	4315.97	PASS	AB=0.952;AC=16;AF=0.286;AN=56;BaseQRankSum=1.446;DP=593;FS=1.999;HRun=0;HaplotypeScore=389.0539;InbreedingCoeff=0.1670;MQ=49.97;MQ0=20;MQRankSum=1.522;QD=14.06;ReadPosRankSum=-2.310;VQSLOD=1.5828;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:25:60.69:0,61,881	0/0:10,0:10:8.90:0,9,162	0/0:4,0:3:9.03:0,9,160	0/0:3,0:2:5.81:0,6,65	1/1:36,0:29:24.05:352,24,0	0/1:24,0:24:80.62:772,0,81	0/1:15,0:12:75.87:169,0,76	0/0:39,0:27:57.35:0,57,768	0/1:23,0:23:99:533,0,176	0/0:30,0:28:60.04:0,60,1526	0/0:11,0:11:21.07:0,21,454	1/1:18,0:18:37.62:566,38,0	0/1:30,0:28:99:205,0,404	0/1:31,0:29:99:143,0,337	0/1:25,0:24:91.63:447,0,92	0/1:32,0:32:47.71:452,0,48	0/1:24,0:24:46.91:281,0,47	0/1:16,0:16:1.86:2,0,1055	0/0:22,0:20:43.40:0,43,932	0/0:13,0:13:20.98:0,21,586	0/0:21,0:21:37.37:0,37,1149	0/0:16,0:16:39.07:0,39,927	0/1:1,14:14:0.04:0,0,0	1/1:18,0:17:21.54:393,22,0	0/0:29,0:29:69.24:0,69,1630	0/0:23,0:23:39.84:0,40,1972	0/0:26,0:25:36.10:0,36,1283	0/0:13,0:13:5.80:0,6,590
chr10	40458592	.	CCTTT	C	1266.85	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=6.830;DP=527;FS=1.685;HRun=0;HaplotypeScore=86.8486;InbreedingCoeff=0.8683;MQ=80.29;MQ0=0;MQRankSum=-2.968;QD=30.16;ReadPosRankSum=0.357;VQSLOD=3.3651;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,18:18:42.08:796,42,0	0/0:6,0:6:18.06:0,18,486	0/0:10,0:10:27.09:0,27,648	0/0:17,0:17:39.11:0,39,893	0/0:13,0:11:29.75:0,30,442	0/0:15,0:15:45.14:0,45,1160	0/0:36,0:36:99:0,102,2634	0/0:23,0:23:63.21:0,63,1648	0/0:22,0:22:54.19:0,54,1439	0/0:14,0:14:36.12:0,36,968	0/0:5,0:5:15.05:0,15,405	0/0:23,0:23:66.23:0,66,1781	0/0:19,0:19:54.19:0,54,1448	0/0:27,0:27:78.27:0,78,2025	0/0:18,0:18:54.19:0,54,1458	0/0:12,0:12:30.06:0,30,748	0/0:27,0:27:81.28:0,81,2172	0/0:26,0:26:75.24:0,75,1921	0/0:18,0:18:51.18:0,51,1269	0/0:13,0:13:36.12:0,36,934	0/0:65,0:65:99:0,193,5115	1/1:0,9:9:3.16:57,3,0	0/0:10,0:10:30.09:0,30,752	0/0:31,0:31:90.29:0,90,2290	1/1:0,15:15:30.10:545,30,0	0/0:19,0:19:54.19:0,54,1430	0/0:15,0:15:45.14:0,45,1157	0/0:1,0:1:3.01:0,3,81
chr10	40459123	.	A	AC	3737.38	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-14.015;DP=717;FS=0.832;HRun=6;HaplotypeScore=76.5304;InbreedingCoeff=0.9985;MQ=88.13;MQ0=0;MQRankSum=-1.866;QD=33.37;ReadPosRankSum=3.292;VQSLOD=3.4645;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,138,1391	0/0:13,0:13:33.07:0,33,336	0/0:22,0:22:48.09:0,48,482	0/0:31,0:31:74.98:0,75,714	1/1:2,19:21:51.16:641,51,0	0/0:16,0:16:45.10:0,45,459	0/0:33,0:33:81.14:0,81,813	0/0:23,0:23:51.08:0,51,505	0/0:27,0:27:78.17:0,78,795	0/0:30,0:30:78.17:0,78,795	0/0:8,0:8:24.05:0,24,245	0/0:32,0:32:90.20:0,90,916	0/0:25,0:25:69.16:0,69,703	0/0:30,0:30:81.18:0,81,825	1/1:4,32:36:96.31:1208,96,0	1/1:2,26:28:50.65:951,51,0	1/1:2,25:27:75.24:938,75,0	0/0:18,0:18:48.11:0,48,489	0/0:20,0:20:45.06:0,45,450	0/0:8,0:9:23.08:0,23,220	0/0:49,0:49:99:0,132,1346	0/0:23,0:23:51.10:0,51,520	0/0:23,0:23:60.13:0,60,611	0/0:38,0:38:99:0,108,1094	0/0:19,0:19:48.10:0,48,483	0/0:35,0:35:90.11:0,90,898	0/0:20,0:20:57.13:0,57,581	0/0:11,0:11:30.04:0,30,297
chr10	40459783	.	ATT	A	7120.66	PASS	AB=0.696;AC=46;AF=0.821;AN=56;BaseQRankSum=-4.362;DP=623;FS=1.121;HRun=15;HaplotypeScore=93.6530;InbreedingCoeff=0.7620;MQ=69.87;MQ0=4;MQRankSum=-2.489;QD=13.38;ReadPosRankSum=0.907;VQSLOD=4.1250;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,0:27:43.82:188,44,0	0/1:6,1:8:0.53:44,0,1	0/0:25,0:15:21.87:0,22,191	0/0:11,0:8:6.49:0,6,69	1/1:7,30:38:83.22:704,83,0	1/1:3,11:15:32.71:276,33,0	1/1:3,11:16:29.40:235,29,0	1/1:15,14:32:46.87:370,47,0	1/1:8,12:20:17.45:281,17,0	1/1:8,16:27:37.22:386,37,0	1/1:7,17:26:43.83:365,44,0	0/0:13,1:25:11.84:0,12,168	1/1:6,18:24:44.89:395,45,0	1/1:8,15:23:44.77:396,45,0	1/1:5,17:24:41.42:399,41,0	1/1:8,12:20:32.78:290,33,0	1/1:6,17:23:44.76:396,45,0	1/1:10,5:18:19.84:178,20,0	1/1:6,16:22:47.57:403,48,0	1/1:9,20:30:44.55:440,45,0	1/1:1,7:9:17.68:143,18,0	1/1:2,1:20:43.96:201,44,0	0/1:5,2:16:24.91:34,0,25	0/0:5,2:28:27.37:0,27,192	1/1:7,0:23:35.36:151,35,0	1/1:7,16:25:50.19:419,50,0	1/1:15,13:27:20.30:228,20,0	1/1:8,7:16:17.65:198,18,0
chr10	40461051	.	TA	T	2012.83	PASS	AB=0.875;AC=21;AF=0.375;AN=56;BaseQRankSum=4.572;DP=293;FS=3.897;HRun=12;HaplotypeScore=29.2824;InbreedingCoeff=0.7539;MQ=56.89;MQ0=12;MQRankSum=-0.948;QD=13.51;ReadPosRankSum=-1.285;VQSLOD=2.5694;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,12:12:32.87:255,33,0	0/0:6,0:6:18.03:0,18,178	0/0:5,0:3:5.22:0,5,33	0/0:5,0:2:0:0,0,0	0/0:6,0:6:15.02:0,15,147	0/0:11,0:11:6.88:0,7,251	0/0:2,0:1:0:0,0,0	1/1:7,14:20:41.19:310,41,0	0/0:4,0:4:3.01:0,3,30	0/0:15,0:14:17.79:0,18,303	0/0:9,0:9:27.04:0,27,268	0/0:7,0:7:21.03:0,21,207	0/0:11,0:12:29.89:0,30,288	0/0:12,1:12:9.82:0,10,275	0/0:9,0:9:21.04:0,21,211	0/0:8,0:8:21.04:0,21,213	0/0:25,0:22:49.68:0,50,569	0/1:18,3:17:46.08:46,0,235	1/1:8,11:17:34.90:261,35,0	1/1:1,2:3:5.98:46,6,0	1/1:0,5:5:11.95:93,12,0	1/1:0,3:3:8.97:70,9,0	0/0:3,0:3:9:0,9,85	0/0:4,0:4:12.02:0,12,122	1/1:2,13:15:35.85:279,36,0	1/1:2,11:13:5.42:225,5,0	1/1:1,12:13:32.87:255,33,0	1/1:5,17:21:47.79:371,48,0
chr10	40461467	.	GGT	G	8758.31	PASS	AB=0.913;AC=30;AF=0.536;AN=56;BaseQRankSum=15.064;DP=706;FS=0.987;HRun=0;HaplotypeScore=85.7115;InbreedingCoeff=0.5574;MQ=70.23;MQ0=3;MQRankSum=-1.425;QD=18.56;ReadPosRankSum=4.411;VQSLOD=4.7185;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:33,5:38:14.42:14,0,1321	0/1:15,2:17:31.69:32,0,539	0/0:27,1:22:5.19:0,5,519	0/1:29,0:28:4.41:4,0,529	1/1:3,13:18:44.64:485,45,0	1/1:4,13:16:33.10:406,33,0	1/1:6,19:25:39.12:480,39,0	0/0:22,0:22:51.12:0,51,760	1/1:7,31:38:87.27:1069,87,0	0/0:19,2:21:3.11:0,3,596	0/0:13,0:13:11.50:0,11,513	1/1:3,20:23:51.16:627,51,0	1/1:2,27:30:69.05:826,69,0	1/1:6,22:28:63.20:775,63,0	1/1:10,27:37:78.08:937,78,0	1/1:4,25:29:60.06:738,60,0	1/1:3,16:19:42.13:517,42,0	0/1:18,2:21:27.80:28,0,747	0/0:24,1:25:20.27:0,20,809	0/0:19,1:20:17.26:0,17,794	0/0:49,3:51:83.43:0,83,1778	0/0:23,1:24:23.28:0,23,892	1/1:3,22:26:63.06:753,63,0	1/1:2,29:31:84.26:1033,84,0	0/1:14,2:16:28.70:29,0,562	0/1:27,2:29:4.60:5,0,954	0/0:24,1:25:26.31:0,26,887	0/0:4,0:4:12.04:0,12,196
chr10	40462016	.	A	AAG	236.05	PASS	AB=0.939;AC=13;AF=0.260;AN=50;BaseQRankSum=1.091;DP=480;FS=3.639;HRun=0;HaplotypeScore=93.4927;InbreedingCoeff=0.1256;MQ=52.96;MQ0=9;MQRankSum=1.214;QD=1.26;ReadPosRankSum=-2.605;VQSLOD=1.4991;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:16,4:20:45.18:76,0,45	0/0:8,0:9:2.84:0,3,14	./.	./.	1/1:19,0:18:7.87:45,8,0	0/1:19,0:20:3.87:4,0,135	0/0:13,0:13:5.98:0,6,55	./.	0/0:19,0:19:15.04:0,15,160	0/0:13,0:18:2.84:0,3,14	0/0:10,0:14:2.84:0,3,14	0/1:23,0:21:18.26:18,0,114	0/0:9,0:9:2.84:0,3,14	0/0:10,0:17:11.83:0,12,57	0/1:20,0:20:66.79:100,0,67	0/1:15,0:13:3.84:4,0,17	1/1:20,0:20:5.50:39,6,0	0/0:11,0:17:11.36:0,11,56	0/1:17,0:16:0:0,0,0	0/0:25,0:25:2.90:0,3,31	0/0:12,0:12:6:0,6,57	1/1:8,8:17:3.01:44,3,0	0/0:19,0:20:11.96:0,12,115	0/0:19,0:19:13.43:0,13,168	0/1:11,4:15:26.22:38,0,26	0/0:18,0:18:6.01:0,6,64	0/0:26,0:26:35.46:0,35,367	0/0:11,0:11:12:0,12,117
chr10	40462059	.	A	AGC	1162.06	PASS	AB=0.941;AC=17;AF=0.304;AN=56;BaseQRankSum=-4.861;DP=562;FS=0.000;HRun=0;HaplotypeScore=106.5705;InbreedingCoeff=0.3469;MQ=67.11;MQ0=16;MQRankSum=1.034;QD=4.84;ReadPosRankSum=-0.193;VQSLOD=2.6853;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:25:3.28:0,3,268	0/0:7,0:7:20.96:0,21,171	0/0:26,0:13:33.29:0,33,317	0/0:46,0:17:31.76:0,32,323	1/1:31,0:30:8.26:62,8,0	0/0:16,0:16:29.78:0,30,216	0/0:26,0:26:42.77:0,43,397	1/1:27,0:24:47.50:375,48,0	0/0:20,0:20:21.20:0,21,261	0/0:20,0:19:38.88:0,39,332	0/0:12,0:10:17.97:0,18,148	0/1:17,0:17:1.49:1,0,195	0/0:5,0:5:11.91:0,12,85	0/0:16,0:15:5.87:0,6,158	0/1:7,16:22:12.27:146,0,12	0/1:25,0:23:12.57:13,0,36	0/1:27,0:27:13.99:15,0,14	0/0:21,0:19:45.20:0,45,334	1/1:7,0:6:14.30:101,14,0	1/1:14,0:14:1.41:67,1,0	1/1:21,0:21:16.64:228,17,0	0/0:22,0:22:7.19:0,7,180	0/0:16,0:16:29.76:0,30,254	0/0:27,0:25:53.62:0,54,391	0/0:15,0:14:8.68:0,9,201	0/1:16,0:16:7.05:132,0,7	0/1:21,0:21:93.37:96,0,93	0/1:11,0:11:23.68:99,0,24
chr10	40462061	.	A	AGCGC	655.32	PASS	AB=1.000;AC=8;AF=0.143;AN=56;BaseQRankSum=2.823;DP=544;FS=7.670;HRun=0;HaplotypeScore=121.2642;InbreedingCoeff=0.6035;MQ=68.78;MQ0=15;MQRankSum=-0.991;QD=4.89;ReadPosRankSum=-0.095;VQSLOD=1.9823;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:25:45.07:0,45,625	0/0:7,0:7:21.07:0,21,337	0/0:27,0:14:36.09:0,36,565	0/0:46,0:17:41.34:0,41,594	1/1:11,19:31:8.18:228,8,0	0/0:14,0:14:1.64:0,2,168	0/1:25,0:25:7.64:8,0,72	0/0:26,0:23:34.45:0,34,199	0/0:17,0:17:19.10:0,19,165	0/0:19,0:19:42.05:0,42,651	0/0:13,0:11:24.04:0,24,334	0/0:14,0:15:6.69:0,7,176	0/0:5,0:5:5.19:0,5,30	0/0:15,0:14:11.69:0,12,74	0/1:24,0:23:1.50:213,0,2	1/1:9,12:22:14.22:242,14,0	1/1:2,24:29:5.76:100,6,0	0/0:21,0:19:45.15:0,45,644	0/0:6,0:5:7.91:0,8,27	0/0:13,0:13:15.02:0,15,140	0/0:21,0:21:35.47:0,35,240	0/0:19,0:19:26.82:0,27,417	0/0:15,0:15:10.65:0,11,137	0/0:26,0:24:27.79:0,28,239	0/0:11,0:10:27.07:0,27,427	0/0:14,0:14:25.97:0,26,197	0/0:22,0:22:43.66:0,44,596	0/0:11,0:11:13.37:0,13,168
chr10	40463511	.	T	TCAACCAAA	14062.24	PASS	AB=0.592;AC=23;AF=0.411;AN=56;BaseQRankSum=-12.730;DP=674;FS=0.807;HRun=0;HaplotypeScore=144.7528;InbreedingCoeff=0.9338;MQ=67.29;MQ0=0;MQRankSum=-13.579;QD=52.28;ReadPosRankSum=4.154;VQSLOD=4.8273;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:96.30:0,96,2429	0/0:15,0:15:39.13:0,39,962	0/0:34,0:32:59.98:0,60,998	0/0:21,0:21:12.15:0,12,738	1/1:5,16:20:33.03:1240,33,0	1/1:4,21:28:30.10:1189,30,0	1/1:1,14:17:36.04:1411,36,0	0/0:21,0:21:51.12:0,51,995	1/1:5,19:28:33.11:1376,33,0	0/0:41,0:41:87.29:0,87,2100	0/0:27,0:27:69.11:0,69,1569	1/1:4,21:27:27.01:1141,27,0	1/1:2,17:21:48.53:2028,49,0	1/1:3,17:20:21.07:887,21,0	1/1:1,20:25:48.16:1953,48,0	1/1:1,13:16:15.05:634,15,0	0/1:9,17:29:4.41:937,0,4	0/0:29,0:29:75.09:0,75,1770	0/0:20,0:19:39.08:0,39,865	0/0:27,0:27:72.21:0,72,1756	0/0:27,0:27:69.17:0,69,1584	0/0:16,0:16:45.03:0,45,1024	1/1:5,7:15:11.98:254,12,0	1/1:6,14:21:24.08:1013,24,0	0/0:19,0:19:48.13:0,48,1132	0/0:28,0:28:72.23:0,72,1759	0/0:33,0:33:75.20:0,75,1671	0/0:9,0:9:27.06:0,27,609
chr10	40463826	.	TACACAC	T	302.79	PASS	AB=1.000;AC=8;AF=0.160;AN=50;BaseQRankSum=2.048;DP=571;FS=2.243;HRun=0;HaplotypeScore=182.1964;InbreedingCoeff=0.4816;MQ=50.85;MQ0=12;MQRankSum=-4.778;QD=2.86;ReadPosRankSum=-1.509;VQSLOD=2.6482;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:30:9.03:126,9,0	0/0:7,0:7:2.97:0,3,20	./.	./.	0/0:17,0:17:0.89:0,1,3	0/0:18,0:18:14.53:0,15,276	0/0:30,0:30:5.73:0,6,124	0/0:20,0:20:24.06:0,24,447	0/0:17,0:17:6.02:0,6,114	0/0:21,0:20:47.19:0,47,1146	0/0:31,0:31:20.75:0,21,346	0/0:19,0:19:6.49:0,6,140	0/0:15,0:15:12.04:0,12,239	./.	0/1:15,0:15:3.14:3,0,65	0/1:24,0:24:12.04:12,0,81	0/0:18,0:18:8.16:0,8,111	0/0:16,0:16:26.12:0,26,562	0/0:10,0:9:10.57:0,11,156	0/0:18,0:23:20.17:0,20,403	0/0:46,0:46:57.10:0,57,1319	1/1:11,5:18:6.02:123,6,0	0/0:17,0:17:17.99:0,18,349	0/0:26,0:24:5.94:0,6,167	1/1:11,7:19:9.03:165,9,0	0/0:19,0:20:34.32:0,34,638	0/0:18,0:26:8.31:0,8,163	0/0:4,0:9:15.05:0,15,370
chr10	40463866	.	C	CTA	3519.61	PASS	AB=0.900;AC=24;AF=0.429;AN=56;BaseQRankSum=4.733;DP=483;FS=6.915;HRun=0;HaplotypeScore=121.4639;InbreedingCoeff=0.8685;MQ=60.52;MQ0=5;MQRankSum=-1.573;QD=18.33;ReadPosRankSum=-1.015;VQSLOD=3.5051;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:54.16:0,54,714	0/0:5,0:5:9.03:0,9,123	0/0:25,0:16:33.53:0,34,505	0/1:33,0:22:5.14:5,0,430	1/1:5,0:6:7.88:141,8,0	1/1:12,7:20:33.11:497,33,0	1/1:18,6:24:34.62:460,35,0	0/0:27,0:26:67.02:0,67,892	1/1:11,3:15:27.09:391,27,0	0/0:13,0:13:30.09:0,30,389	0/0:23,0:23:6.60:0,7,403	1/1:8,0:8:18.03:235,18,0	1/1:6,1:8:7.26:77,7,0	0/1:6,2:7:0.11:0,0,0	1/1:8,2:11:18.06:280,18,0	1/1:6,6:12:27.08:365,27,0	1/1:7,6:13:36.10:492,36,0	0/0:12,0:11:20.06:0,20,230	0/0:9,0:9:22.64:0,23,317	0/0:14,0:14:25.22:0,25,350	0/0:44,0:44:78.07:0,78,1060	0/0:23,0:23:35.79:0,36,474	1/1:13,0:14:26.97:367,27,0	1/1:14,4:19:16.56:208,17,0	0/0:21,0:21:45.06:0,45,603	0/0:22,0:22:59.17:0,59,768	0/0:10,0:10:17.36:0,17,172	0/0:13,0:12:23.23:0,23,242
chr10	40463874	.	T	TG	2143.62	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=3.967;DP=507;FS=1.643;HRun=9;HaplotypeScore=117.0864;InbreedingCoeff=0.8671;MQ=63.70;MQ0=4;MQRankSum=-3.819;QD=16.12;ReadPosRankSum=-2.656;VQSLOD=2.6983;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:59.93:0,60,513	0/0:0,0:5:8.15:0,8,24	0/0:28,0:19:47.38:0,47,378	0/0:36,0:26:10.60:0,11,265	0/0:6,0:6:8.54:0,9,78	1/1:4,16:21:47.96:508,48,0	1/1:6,16:22:45.12:496,45,0	0/0:29,0:29:59.98:0,60,521	1/1:4,11:15:7.09:304,7,0	0/0:3,0:13:18.78:0,19,57	0/0:2,0:23:39.45:0,39,120	1/1:2,10:12:30.07:322,30,0	1/1:7,1:14:8.79:52,9,0	1/1:9,0:14:5.74:30,6,0	0/0:10,0:10:23.99:0,24,208	0/0:12,0:12:29.97:0,30,257	0/0:17,0:17:35.98:0,36,312	0/0:2,0:8:10.18:0,10,30	0/0:7,0:7:5.98:0,6,52	0/0:19,0:19:35.93:0,36,307	0/0:41,0:41:89.80:0,90,766	0/0:22,0:22:59.67:0,60,500	1/1:5,9:14:3.96:254,4,0	1/1:5,15:19:36.90:368,37,0	0/0:21,1:22:11.67:0,12,321	0/0:18,0:20:41:0,41,342	0/0:13,0:13:14.97:0,15,130	0/0:13,0:13:32.99:0,33,286
chr10	40464459	.	G	GA	5334.32	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-15.240;DP=683;FS=1.488;HRun=8;HaplotypeScore=61.7178;InbreedingCoeff=0.9983;MQ=82.20;MQ0=0;MQRankSum=-4.537;QD=28.68;ReadPosRankSum=3.827;VQSLOD=5.0385;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,135,1223	0/0:16,0:16:44.62:0,45,394	0/0:21,0:21:53.69:0,54,463	0/0:20,0:19:37.79:0,38,336	1/1:4,30:34:75.22:866,75,0	0/0:22,0:21:53.98:0,54,484	0/0:20,0:20:53.98:0,54,483	0/0:25,0:24:63.01:0,63,572	0/0:30,0:30:75.01:0,75,678	0/0:23,0:23:51.01:0,51,467	0/0:19,0:19:57.03:0,57,520	1/1:3,21:24:60.18:692,60,0	0/0:32,0:32:90:0,90,815	0/0:26,0:26:75.02:0,75,681	1/1:7,27:34:82.49:937,82,0	1/1:1,22:23:60.18:693,60,0	1/1:3,28:31:75.22:866,75,0	0/0:10,0:10:24.01:0,24,220	0/0:19,1:20:22.40:0,22,451	0/0:28,0:28:75.03:0,75,686	0/0:30,0:30:90.05:0,90,824	0/0:17,0:17:42.01:0,42,384	1/1:1,15:16:42.12:485,42,0	1/1:0,24:24:69.21:796,69,0	0/0:26,0:26:72.04:0,72,659	0/0:21,0:21:57.01:0,57,517	0/0:34,0:34:96.05:0,96,878	0/0:7,0:7:21.01:0,21,192
chr10	40464864	.	G	GAA	5999.23	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-2.965;DP=559;FS=1.130;HRun=9;HaplotypeScore=70.2954;InbreedingCoeff=0.9426;MQ=65.25;MQ0=1;MQRankSum=-0.268;QD=23.16;ReadPosRankSum=1.682;VQSLOD=4.1390;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:22:45.04:0,45,524	0/0:9,0:10:14.96:0,15,215	0/0:11,0:8:8.05:0,8,78	0/0:6,0:3:8.98:0,9,81	1/1:4,0:23:18.68:140,19,0	1/1:4,23:28:62.70:927,63,0	1/1:6,12:18:39.13:593,39,0	0/0:28,0:28:57.03:0,57,579	1/1:5,17:23:57.17:838,57,0	0/0:26,0:26:46.97:0,47,699	0/0:21,0:21:60.15:0,60,638	1/1:3,16:20:36.12:554,36,0	1/1:2,13:17:41.58:562,42,0	1/1:2,20:23:56.55:830,57,0	1/1:6,0:20:30.28:121,30,0	1/1:6,0:21:3.52:79,4,0	1/1:2,2:25:53.43:255,53,0	0/0:18,0:18:48.04:0,48,490	0/0:18,0:18:45.07:0,45,462	0/0:39,0:39:99:0,102,1085	0/0:5,0:5:12.01:0,12,119	0/0:12,0:13:32.80:0,33,323	1/1:5,21:28:56.34:822,56,0	1/1:3,10:12:18.06:277,18,0	0/0:23,0:23:63.14:0,63,671	0/0:25,0:25:57.09:0,57,599	0/0:32,0:32:81.17:0,81,862	0/0:3,0:3:9.02:0,9,96
chr10	40466061	.	T	TA	13591.15	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-4.348;DP=538;FS=3.875;HRun=7;HaplotypeScore=93.9933;InbreedingCoeff=0.9702;MQ=75.87;MQ0=0;MQRankSum=-7.456;QD=26.86;ReadPosRankSum=4.311;VQSLOD=5.2090;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,25:29:66.20:797,66,0	1/1:12,0:12:29.75:211,30,0	0/0:15,0:16:17.94:0,18,234	0/0:16,0:15:27.07:0,27,273	1/1:4,29:33:87.06:977,87,0	1/1:2,22:24:60.18:725,60,0	1/1:6,18:24:51.16:612,51,0	1/1:4,22:26:63.19:761,63,0	1/1:1,17:18:54.12:634,54,0	1/1:25,0:25:64.60:406,65,0	1/1:25,0:25:59.46:414,59,0	1/1:3,14:17:42.13:506,42,0	1/1:1,9:10:27.08:326,27,0	1/1:2,12:14:39.01:450,39,0	1/1:7,11:18:30.09:361,30,0	1/1:2,14:16:45.02:525,45,0	1/1:3,16:20:38.74:471,39,0	1/1:17,0:17:15.66:256,16,0	1/1:3,18:21:54.12:610,54,0	1/1:2,20:22:57.13:672,57,0	1/1:4,10:14:24.07:290,24,0	1/1:3,14:17:42.13:507,42,0	1/1:0,16:16:39.12:467,39,0	1/1:0,13:13:30.09:362,30,0	1/1:2,26:28:46.29:838,46,0	1/1:4,16:20:48.11:548,48,0	1/1:2,21:22:60.18:721,60,0	1/1:0,4:4:12.04:145,12,0
chr10	40466064	.	A	AC	5770.34	PASS	AB=1.000;AC=40;AF=0.714;AN=56;BaseQRankSum=0.826;DP=548;FS=3.367;HRun=0;HaplotypeScore=130.3372;InbreedingCoeff=-0.0586;MQ=73.88;MQ0=0;MQRankSum=-3.562;QD=11.18;ReadPosRankSum=11.949;VQSLOD=3.7005;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:30:12.07:181,12,0	1/1:2,11:13:27.09:404,27,0	0/0:16,0:16:38.67:0,39,433	0/0:16,0:15:41.27:0,41,481	0/1:35,0:35:14.55:179,0,15	1/1:24,0:24:6.45:171,6,0	0/1:24,0:24:17.15:118,0,17	0/1:27,0:27:49.08:109,0,49	1/1:18,0:18:29.14:197,29,0	1/1:0,27:27:81.13:1094,81,0	1/1:1,23:24:71.97:973,72,0	0/1:17,0:17:1.49:147,0,1	1/1:10,0:10:0.10:80,0,0	1/1:14,0:14:8.81:114,9,0	0/1:18,0:18:49.64:50,0,84	0/1:17,0:17:2.56:78,0,3	0/1:19,0:19:0.11:122,0,0	1/1:2,16:18:33.91:611,34,0	0/1:22,0:22:31.32:117,0,31	0/1:23,0:23:34.77:121,0,35	0/1:15,0:15:25.20:56,0,25	1/1:15,0:15:10.30:107,10,0	1/1:17,0:17:0.85:119,1,0	1/1:14,0:14:5.69:94,6,0	0/1:29,0:29:25.51:181,0,26	0/1:20,0:20:6.48:107,0,6	1/1:22,0:22:50.34:194,50,0	1/1:4,0:4:10.57:46,11,0
chr10	40466108	.	ATGTGTGTGTG	A	5106.74	PASS	AB=0.778;AC=15;AF=0.268;AN=56;BaseQRankSum=2.374;DP=583;FS=7.699;HRun=0;HaplotypeScore=246.4233;InbreedingCoeff=0.8454;MQ=46.52;MQ0=6;MQRankSum=-5.760;QD=38.40;ReadPosRankSum=2.075;VQSLOD=3.1267;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:39:79.15:0,79,2525	0/0:9,0:13:23.06:0,23,718	0/0:18,0:9:6.02:0,6,174	0/0:29,0:13:14.23:0,14,382	0/0:24,0:31:34.08:0,34,820	1/1:11,6:18:30.06:689,30,0	0/1:15,6:21:12.21:360,0,12	0/0:25,0:25:44.11:0,44,983	1/1:8,10:19:36.12:1052,36,0	0/0:23,0:29:56.26:0,56,2171	0/0:12,0:15:36.07:0,36,1197	1/1:7,10:17:33.11:933,33,0	1/1:0,6:6:18.06:482,18,0	1/1:5,9:14:24.08:700,24,0	0/0:15,0:19:26:0,26,714	0/0:13,0:17:25.75:0,26,606	0/0:20,0:24:37.31:0,37,788	0/0:16,0:18:46.85:0,47,1300	0/0:19,0:18:44.96:0,45,908	0/0:20,0:22:21.07:0,21,701	0/0:20,0:18:21.48:0,21,530	0/0:14,0:19:39.52:0,40,1210	1/1:13,8:20:30.09:740,30,0	1/1:15,1:17:6.92:151,7,0	0/0:20,0:33:75.12:0,75,2704	0/0:30,0:30:81.27:0,81,2534	0/0:22,0:23:36.07:0,36,1030	0/0:4,0:4:3.01:0,3,116
chr10	40466110	.	G	GTGTGTGTGTA	2888.46	PASS	AB=1.000;AC=18;AF=0.321;AN=56;BaseQRankSum=-1.514;DP=582;FS=3.254;HRun=0;HaplotypeScore=259.4355;InbreedingCoeff=0.1872;MQ=46.26;MQ0=9;MQRankSum=3.680;QD=8.50;ReadPosRankSum=3.959;VQSLOD=2.2028;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:37,0:37:22.82:23,0,272	0/1:13,0:13:4.68:5,0,89	0/0:18,0:7:9.03:0,9,106	0/0:28,0:13:23.77:0,24,227	1/1:26,5:31:32.55:560,33,0	0/0:18,0:18:41.44:0,41,439	0/0:19,0:19:17.22:0,17,177	0/0:27,0:26:36.01:0,36,318	0/0:19,0:19:44.91:0,45,695	0/1:30,0:29:10.27:10,0,317	0/0:14,0:14:27.62:0,28,314	0/0:17,0:17:35.12:0,35,481	0/0:7,0:7:20.87:0,21,304	0/0:14,0:14:23.94:0,24,384	1/1:16,3:19:29.60:456,30,0	1/1:14,3:17:27.06:696,27,0	1/1:25,1:25:30.14:621,30,0	0/1:18,0:18:29.64:30,0,261	0/1:21,0:18:98.74:119,0,99	0/1:22,0:22:71.99:109,0,72	0/1:20,0:18:50.07:50,0,106	0/0:19,0:19:15.48:0,15,277	0/0:21,0:20:36.27:0,36,406	0/0:17,0:17:12.28:0,12,157	0/1:33,0:33:3.22:3,0,147	0/1:30,0:30:99:259,0,341	0/1:23,0:23:99:126,0,221	0/0:4,0:4:2.96:0,3,19
chr10	40468351	.	TCTACAGACAGTCGTGCGTTC	T	11476.98	PASS	AB=0.528;AC=13;AF=0.232;AN=56;BaseQRankSum=9.048;DP=580;FS=24.774;HRun=0;HaplotypeScore=373.7196;InbreedingCoeff=0.8740;MQ=66.49;MQ0=0;MQRankSum=-10.442;QD=119.55;ReadPosRankSum=-1.222;VQSLOD=3.7434;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,117,7837	0/0:7,0:7:21.07:0,21,2063	0/0:7,0:7:20.10:0,20,586	0/0:10,0:10:27.04:0,27,1090	0/0:16,0:16:48.16:0,48,4082	0/0:23,0:23:66.23:0,66,5360	0/0:29,0:29:87.28:0,87,6716	1/1:0,10:10:30.05:1203,30,0	0/0:22,0:22:66.21:0,66,4698	0/0:28,0:28:84.28:0,84,7556	0/0:17,0:17:51.18:0,51,4731	0/0:23,0:23:66.23:0,66,4986	0/0:21,0:21:57.67:0,58,4278	0/0:30,0:30:84.29:0,84,6737	0/0:19,0:19:54.18:0,54,4534	0/0:19,0:19:57.20:0,57,4508	0/0:41,0:41:99:0,114,9008	0/0:15,0:15:45.15:0,45,3758	1/1:0,14:14:42.12:2030,42,0	1/1:0,19:19:42.14:1809,42,0	1/1:0,9:9:8.99:523,9,0	0/0:18,0:18:52.06:0,52,4078	0/0:23,0:23:63.20:0,63,4467	0/0:46,0:46:99:0,129,10568	0/0:28,0:28:81.24:0,81,5975	0/1:2,17:19:99:2511,0,507	1/1:0,21:21:51.18:2877,51,0	1/1:0,4:4:9.03:524,9,0
chr10	40468420	.	AT	A	4181.52	PASS	AB=0.837;AC=39;AF=0.696;AN=56;BaseQRankSum=4.980;DP=533;FS=22.004;HRun=12;HaplotypeScore=101.2305;InbreedingCoeff=0.7619;MQ=61.47;MQ0=0;MQRankSum=2.626;QD=10.53;ReadPosRankSum=6.509;VQSLOD=1.0343;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,33:40:56.21:620,56,0	1/1:3,2:5:8.01:52,8,0	0/0:8,0:7:6.48:0,6,62	0/1:2,0:2:17.20:17,0,24	1/1:3,20:24:28.35:393,28,0	1/1:5,2:23:29.39:100,29,0	1/1:3,0:25:36.65:106,37,0	0/0:26,2:29:19.53:0,20,519	1/1:4,0:16:20.36:59,20,0	1/1:3,28:32:52.22:576,52,0	1/1:3,11:14:32.87:255,33,0	1/1:1,0:12:14.25:41,14,0	1/1:3,0:14:16.28:47,16,0	1/1:3,0:20:24.91:72,25,0	1/1:1,7:9:19.91:145,20,0	1/1:2,8:11:25.93:192,26,0	0/1:9,20:31:0.06:346,0,0	1/1:2,12:15:31.92:256,32,0	0/0:18,1:19:6.41:0,6,226	0/0:23,1:26:33.53:0,34,464	0/0:12,0:12:27.05:0,27,273	1/1:2,15:17:38.61:302,39,0	1/1:2,0:18:26.47:76,26,0	1/1:3,0:20:28.52:82,29,0	1/1:3,21:24:56.77:441,57,0	0/1:23,2:25:3.56:4,0,304	0/0:27,0:27:50.94:0,51,462	0/0:15,0:15:42.08:0,42,426
chr10	40468788	.	G	GT	10860.83	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-14.599;DP=607;FS=13.368;HRun=0;HaplotypeScore=59.7769;InbreedingCoeff=0.9987;MQ=79.85;MQ0=0;MQRankSum=-1.567;QD=39.78;ReadPosRankSum=3.044;VQSLOD=4.1743;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,135,1831	0/0:7,0:7:21.06:0,21,276	0/0:21,0:22:58.57:0,59,734	0/0:17,0:17:38.36:0,38,526	1/1:0,21:21:48.16:766,48,0	1/1:0,15:15:42.14:671,42,0	1/1:0,25:25:57.19:911,57,0	0/0:19,0:19:47.88:0,48,610	1/1:1,27:28:75.26:1197,75,0	0/0:23,0:23:66.21:0,66,906	0/0:12,0:12:36.09:0,36,468	1/1:1,20:21:45.15:713,45,0	1/1:0,11:11:30.10:478,30,0	1/1:0,21:21:54.18:861,54,0	1/1:1,24:25:50.91:814,51,0	1/1:0,13:13:33.11:527,33,0	1/1:0,33:33:90.31:1437,90,0	0/0:22,0:22:66.21:0,66,905	0/0:17,0:17:51.14:0,51,671	0/0:21,0:21:54.09:0,54,702	0/0:45,0:45:99:0,132,1784	0/0:27,0:27:78.26:0,78,1083	1/1:0,22:22:60.20:956,60,0	1/1:0,38:38:96.33:1531,96,0	0/0:16,0:16:44.36:0,44,594	0/0:18,0:18:54.17:0,54,731	0/0:16,0:15:48.12:0,48,647	0/0:7,0:7:21.07:0,21,279
chr10	40469427	.	CAACAAACA	C	6113.14	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=2.859;DP=575;FS=0.441;HRun=0;HaplotypeScore=166.4571;InbreedingCoeff=0.9592;MQ=62.65;MQ0=1;MQRankSum=-7.959;QD=28.84;ReadPosRankSum=-3.652;VQSLOD=3.8632;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:26:50.79:0,51,398	0/0:10,0:10:27.09:0,27,1109	0/0:20,0:17:9.03:0,9,278	0/0:26,0:22:27.05:0,27,838	0/0:20,0:20:36.12:0,36,1409	1/1:12,13:25:24.08:488,24,0	1/1:7,13:20:30.10:681,30,0	1/1:17,10:27:30.06:418,30,0	1/1:6,13:19:33.11:799,33,0	0/0:22,0:22:51.17:0,51,1917	0/0:16,0:16:27.07:0,27,862	0/0:7,0:23:44.94:0,45,370	0/0:15,0:15:33.11:0,33,1341	0/0:21,0:21:51.18:0,51,2009	0/0:22,0:22:57.18:0,57,2207	0/0:17,0:17:39.13:0,39,1598	0/0:26,0:26:57.20:0,57,2179	0/0:16,0:16:27.05:0,27,928	1/1:14,11:25:33:725,33,0	1/1:14,19:34:45.01:860,45,0	1/1:11,6:17:4.26:149,4,0	0/0:9,0:21:35.93:0,36,293	0/0:10,0:21:27.45:0,27,230	0/0:10,0:26:54.44:0,54,532	0/0:6,0:15:20.98:0,21,172	1/1:6,14:20:39.12:777,39,0	1/1:5,16:21:42.14:986,42,0	1/1:1,3:4:9.03:229,9,0
chr10	40470184	.	ATG	A	2618.96	PASS	AB=0.830;AC=36;AF=0.692;AN=52;BaseQRankSum=8.881;DP=647;FS=2.844;HRun=0;HaplotypeScore=110.3867;InbreedingCoeff=0.2396;MQ=55.22;MQ0=9;MQRankSum=-0.582;QD=5.34;ReadPosRankSum=1.961;VQSLOD=2.9574;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:37,0:50:4.25:16,4,0	0/1:10,0:14:2.81:49,0,3	./.	./.	1/1:19,13:32:1.84:385,2,0	0/1:20,8:27:30.10:116,0,30	1/1:14,7:22:25.14:246,25,0	0/0:34,0:34:2.51:0,3,39	1/1:12,4:16:6.01:65,6,0	0/1:14,0:26:25.57:50,0,26	0/1:15,0:22:27.24:88,0,27	1/1:16,0:18:3.73:16,4,0	1/1:17,5:22:17.49:173,17,0	1/1:18,0:27:19.26:91,19,0	1/1:8,6:14:14.87:145,15,0	1/1:9,6:14:29.55:294,30,0	1/1:13,20:34:65.95:676,66,0	0/1:13,0:18:27.27:29,0,27	0/1:23,0:22:0.40:0,0,170	0/0:29,0:28:30.79:0,31,572	0/0:31,0:31:25.99:0,26,352	1/1:10,0:20:11.83:57,12,0	1/1:11,7:18:5.85:47,6,0	1/1:15,4:19:9.31:126,9,0	1/1:13,0:20:8.52:42,9,0	0/1:20,3:24:67.32:67,0,348	0/0:24,0:24:32.98:0,33,457	0/1:6,0:6:3.08:3,0,122
chr10	40471115	.	G	GAAAAA	4390.63	PASS	AB=0.893;AC=40;AF=0.714;AN=56;BaseQRankSum=4.687;DP=515;FS=2.634;HRun=13;HaplotypeScore=110.3633;InbreedingCoeff=0.5590;MQ=61.33;MQ0=2;MQRankSum=-1.229;QD=11.40;ReadPosRankSum=-5.575;VQSLOD=0.2992;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:69.22:0,69,915	1/1:5,0:14:12.98:143,13,0	0/0:20,0:12:5.86:0,6,136	0/1:13,0:8:19.01:19,0,46	0/0:19,0:21:35.87:0,36,574	1/1:1,0:15:6.02:102,6,0	1/1:3,0:16:9.03:153,9,0	1/1:9,0:23:47.05:510,47,0	1/1:3,0:16:12.04:184,12,0	1/1:7,0:29:51.51:419,52,0	0/1:7,0:26:10.18:160,0,10	1/1:5,4:16:3.01:79,3,0	1/1:7,0:10:8.15:100,8,0	1/1:4,0:16:12.13:96,12,0	0/1:16,0:16:0.51:1,0,343	0/1:13,0:13:11.64:12,0,366	0/0:27,0:28:43.78:0,44,853	1/1:3,0:10:16.37:78,16,0	1/1:6,0:19:38.54:393,39,0	1/1:22,1:33:68.79:781,69,0	1/1:10,0:9:6.91:89,7,0	0/0:13,0:16:15.60:0,16,383	1/1:3,3:19:15:297,15,0	1/1:4,0:10:9.03:122,9,0	0/0:12,0:15:19.03:0,19,406	1/1:5,0:19:38.68:373,39,0	1/1:10,0:33:22.41:204,22,0	1/1:1,0:4:0.14:74,0,0
chr10	40471214	.	T	TA	1221.97	PASS	AB=0.625;AC=23;AF=0.411;AN=56;BaseQRankSum=1.899;DP=464;FS=5.540;HRun=9;HaplotypeScore=68.1776;InbreedingCoeff=0.8918;MQ=76.06;MQ0=0;MQRankSum=-10.881;QD=9.26;ReadPosRankSum=-2.924;VQSLOD=1.5405;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:77.96:0,78,677	0/0:8,0:8:20.99:0,21,182	0/0:12,0:12:16.52:0,17,127	0/0:11,0:11:17.91:0,18,141	1/1:11,15:26:27.23:190,27,0	1/1:5,10:14:6.71:247,7,0	1/1:0,7:7:8.98:83,9,0	0/0:33,0:33:86.96:0,87,753	1/1:5,4:9:11.82:95,12,0	0/0:32,0:32:83.94:0,84,721	0/0:27,0:27:56.97:0,57,495	1/1:4,4:8:12.40:64,12,0	1/1:1,4:5:4.78:25,5,0	1/1:2,4:6:14.79:112,15,0	1/1:6,6:12:20.18:151,20,0	1/1:4,10:14:20.60:188,21,0	1/1:7,8:16:24.31:187,24,0	0/0:12,0:12:32.99:0,33,286	0/0:16,0:18:29.66:0,30,330	0/0:26,0:26:77.98:0,78,677	0/0:11,0:11:26.99:0,27,234	0/0:27,0:27:68.97:0,69,599	1/1:3,6:9:10.29:68,10,0	0/1:2,3:5:1.91:26,0,2	0/0:22,0:22:62.99:0,63,547	0/0:21,0:21:59.99:0,60,521	0/0:34,0:34:95.98:0,96,833	0/0:8,0:8:21:0,21,182
chr10	40471507	.	CA	C	347.03	PASS	AB=0.832;AC=8;AF=0.143;AN=56;BaseQRankSum=0.264;DP=500;FS=4.722;HRun=15;HaplotypeScore=90.4544;InbreedingCoeff=0.1418;MQ=58.05;MQ0=5;MQRankSum=5.232;QD=1.93;ReadPosRankSum=4.822;VQSLOD=-0.3619;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:18,21:43:17.72:237,18,0	0/0:3,0:6:8.68:0,9,55	0/1:36,1:12:3.08:3,0,60	0/0:22,1:10:2.99:0,3,23	0/0:7,0:6:17.11:0,17,96	0/0:11,0:11:28.99:0,29,172	0/0:14,0:14:26.14:0,26,145	0/0:21,1:24:9.01:0,9,250	0/0:10,0:10:14.47:0,14,81	0/0:12,0:25:39.80:0,40,264	0/0:16,0:21:35.86:0,36,226	0/0:16,0:16:20.59:0,21,113	0/1:16,2:18:8.60:9,0,164	0/0:18,1:23:10.47:0,10,177	0/0:22,0:21:30.56:0,31,147	0/0:11,0:10:17.97:0,18,97	0/0:14,0:12:15.32:0,15,75	0/0:6,1:22:7.86:0,8,102	0/0:14,1:18:22.17:0,22,267	0/1:13,2:15:14.54:15,0,134	0/0:10,2:12:7.72:0,8,188	0/1:9,7:16:9.25:78,0,9	0/0:5,0:4:0.47:0,0,1	0/0:11,0:11:5.91:0,6,38	0/1:10,9:21:23.11:129,0,23	0/1:25,2:29:3.29:3,0,230	0/0:17,0:18:34.98:0,35,302	0/0:4,0:4:9:0,9,77
chr10	40471810	.	AAAAAACAAACAAACAAAC	A	2147.29	PASS	AB=0.990;AC=19;AF=0.339;AN=56;BaseQRankSum=-8.329;DP=405;FS=18.464;HRun=0;HaplotypeScore=184.6559;InbreedingCoeff=0.3279;MQ=42.21;MQ0=24;MQRankSum=-7.130;QD=12.48;ReadPosRankSum=-0.044;VQSLOD=1.1340;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:75.04:0,75,4066	0/0:4,0:4:12.04:0,12,520	0/0:14,0:3:9.03:0,9,234	0/0:21,0:3:4.96:0,5,31	0/0:8,0:8:6.22:0,6,40	0/1:15,0:15:82.83:83,0,329	0/0:14,0:14:14.95:0,15,430	1/1:20,0:16:35.85:242,36,0	0/0:18,0:18:26.69:0,27,864	0/0:31,0:29:74.73:0,75,2432	0/0:16,0:16:41.94:0,42,1536	0/1:13,0:13:24.25:24,0,734	0/0:4,0:4:8.39:0,8,108	0/0:5,0:5:2.96:0,3,30	0/1:15,0:14:50.65:51,0,264	0/1:13,0:13:49.37:49,0,107	0/1:21,0:14:49.91:50,0,79	0/0:23,0:21:45.13:0,45,1737	1/1:6,1:5:11.94:204,12,0	1/1:15,1:15:38.62:371,39,0	1/1:11,0:10:8.89:59,9,0	0/0:12,0:11:33.09:0,33,1611	0/1:9,0:9:35.36:35,0,329	0/0:9,0:7:8.37:0,8,121	0/0:11,0:10:18.06:0,18,936	0/1:12,1:13:74.47:300,0,74	1/1:11,4:13:32.85:810,33,0	1/1:4,0:4:5.99:54,6,0
chr10	40471816	.	C	CA	764.42	PASS	AB=0.940;AC=25;AF=0.446;AN=56;BaseQRankSum=1.588;DP=396;FS=12.406;HRun=10;HaplotypeScore=99.1885;InbreedingCoeff=0.3671;MQ=41.08;MQ0=26;MQRankSum=-6.469;QD=4.02;ReadPosRankSum=-2.774;VQSLOD=-0.4152;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:72.22:0,72,860	0/0:6,0:6:18.03:0,18,190	0/0:13,0:3:9.03:0,9,105	0/1:23,0:4:0.95:1,0,2	1/1:13,0:12:1.88:10,2,0	1/1:6,7:12:17.92:175,18,0	0/1:3,8:11:18.20:96,0,18	0/0:18,0:14:5.31:0,5,33	1/1:5,11:16:26.58:206,27,0	0/0:31,0:28:69.19:0,69,805	0/0:14,0:14:42.13:0,42,499	1/1:14,2:16:3.90:136,4,0	1/1:4,0:4:1.43:14,1,0	1/1:5,0:5:2.92:7,3,0	0/1:14,0:13:25.70:41,0,26	0/0:11,0:11:2.87:0,3,35	0/1:18,0:12:5.46:23,0,5	0/0:25,0:23:57.14:0,57,644	0/0:6,0:4:2.08:0,2,7	1/1:14,0:13:5.84:35,6,0	0/1:7,0:6:0:0,0,0	0/0:15,0:14:38.30:0,38,412	1/1:8,1:9:19:150,19,0	0/0:9,1:8:1.24:0,1,4	0/0:13,0:12:18.05:0,18,208	0/1:11,0:11:18.97:19,0,32	0/1:13,0:9:10.67:11,0,14	1/1:3,0:3:1.82:5,2,0
chr10	40471817	.	AAAC	A	1779.38	PASS	AB=1.000;AC=30;AF=0.536;AN=56;BaseQRankSum=2.181;DP=403;FS=9.755;HRun=0;HaplotypeScore=106.2767;InbreedingCoeff=0.3894;MQ=41.09;MQ0=26;MQRankSum=-6.242;QD=7.98;ReadPosRankSum=-3.273;VQSLOD=1.3785;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:78.24:0,78,1563	0/0:6,0:6:18.06:0,18,282	0/0:12,0:3:9.03:0,9,152	0/1:24,0:4:6.69:23,0,7	1/1:15,0:13:16.76:72,17,0	1/1:12,0:11:18.06:229,18,0	0/1:11,0:11:50.96:183,0,51	0/0:18,0:14:5.31:0,5,33	1/1:16,0:16:21.03:363,21,0	0/0:31,0:28:72.20:0,72,1166	0/0:14,0:14:42.14:0,42,665	1/1:12,4:16:31.35:307,31,0	0/1:4,0:4:7.70:43,0,8	1/1:5,0:5:4.90:21,5,0	0/1:15,0:14:53.14:120,0,53	0/1:12,0:12:5.96:6,0,51	0/1:20,0:14:8.77:53,0,9	0/0:25,0:23:57.19:0,57,1031	1/1:6,0:4:2.98:21,3,0	1/1:14,0:13:5.97:49,6,0	0/1:7,0:6:0:0,0,0	0/0:16,0:15:40.02:0,40,754	1/1:2,7:9:20.93:283,21,0	1/1:10,0:8:3.89:30,4,0	0/0:13,0:12:18.06:0,18,362	0/1:11,0:11:39.12:39,0,52	1/1:13,0:9:16.16:118,16,0	1/1:3,0:3:1.82:5,2,0
chr10	40471819	.	AC	A	1043.32	PASS	AB=0.925;AC=29;AF=0.537;AN=54;BaseQRankSum=4.103;DP=358;FS=4.066;HRun=1;HaplotypeScore=91.8699;InbreedingCoeff=0.4910;MQ=42.20;MQ0=22;MQRankSum=-5.873;QD=5.64;ReadPosRankSum=-2.934;VQSLOD=-0.5328;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:80.89:0,81,1133	0/0:6,0:6:18.06:0,18,258	0/0:11,1:3:8.94:0,9,109	0/1:22,1:5:11.51:24,0,12	1/1:14,1:13:23.28:136,23,0	1/1:11,1:11:17.60:109,18,0	0/1:10,1:11:30.45:46,0,30	0/0:7,0:4:5.82:0,6,37	1/1:16,0:16:15.23:115,15,0	0/0:29,0:26:72.20:0,72,1047	0/0:14,0:14:42.14:0,42,616	1/1:16,0:16:22.47:186,22,0	1/1:3,1:4:6.33:36,6,0	1/1:5,0:5:7.36:38,7,0	0/1:12,2:13:20.53:142,0,21	0/1:11,0:11:25.41:28,0,25	1/1:18,1:13:16.45:112,16,0	0/0:25,0:23:57.14:0,57,835	1/1:2,1:1:2.22:7,2,0	1/1:4,0:3:5.96:42,6,0	./.	0/0:16,0:15:42.99:0,43,572	1/1:9,0:9:16.86:90,17,0	1/1:9,0:7:5.69:31,6,0	0/0:13,0:12:18.04:0,18,252	0/1:6,1:7:34.34:39,0,34	1/1:7,0:3:11.88:54,12,0	0/0:2,0:2:2.22:0,2,7
chr10	40471821	.	AAAC	A	1197.80	PASS	AB=0.950;AC=27;AF=0.519;AN=52;BaseQRankSum=3.250;DP=370;FS=6.070;HRun=0;HaplotypeScore=107.4101;InbreedingCoeff=0.3906;MQ=41.78;MQ0=25;MQRankSum=-6.089;QD=6.08;ReadPosRankSum=-2.182;VQSLOD=1.8887;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:83.04:0,83,1577	0/0:7,0:7:21.06:0,21,298	0/0:12,0:3:6.02:0,6,117	0/1:24,0:5:0.88:33,0,1	1/1:17,0:15:18.12:83,18,0	1/1:8,4:11:17.60:151,18,0	0/1:6,7:13:47.22:140,0,47	./.	1/1:7,10:17:20.46:269,20,0	0/0:31,0:28:78.19:0,78,1198	0/0:14,0:14:42.13:0,42,645	1/1:17,0:17:26.92:130,27,0	0/1:4,0:4:7.67:43,0,8	1/1:6,0:6:4.93:22,5,0	0/1:14,0:13:54:92,0,54	0/1:12,0:12:5.25:5,0,50	0/1:21,0:15:11.18:53,0,11	0/0:26,0:24:56.40:0,56,985	1/1:4,0:1:2.98:21,3,0	1/1:2,0:1:1.82:5,2,0	./.	0/0:16,0:15:44.35:0,44,758	1/1:11,0:11:25.99:174,26,0	1/1:9,0:7:3.90:38,4,0	0/0:13,0:12:18.06:0,18,339	0/1:6,0:5:15.02:15,0,53	1/1:8,0:4:14.78:99,15,0	0/0:2,0:2:0:0,0,0
chr10	40471823	.	AC	A	1056.78	PASS	AB=0.965;AC=29;AF=0.558;AN=52;BaseQRankSum=3.671;DP=370;FS=0.000;HRun=1;HaplotypeScore=100.5164;InbreedingCoeff=0.4885;MQ=42.26;MQ0=24;MQRankSum=-5.129;QD=5.50;ReadPosRankSum=-1.710;VQSLOD=-0.3710;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:81.62:0,82,1122	0/0:7,0:7:21.03:0,21,246	0/0:10,0:2:6.02:0,6,91	0/1:22,1:5:9.50:9,0,14	1/1:17,0:15:28.16:156,28,0	1/1:11,1:11:17.17:102,17,0	0/1:12,1:13:37.48:37,0,41	./.	1/1:17,0:17:6.15:88,6,0	0/0:33,0:29:80.32:0,80,965	0/0:14,0:14:42.10:0,42,527	1/1:15,1:16:40.49:270,40,0	1/1:3,1:4:6.39:40,6,0	1/1:6,0:6:10.33:59,10,0	0/1:14,1:14:20.45:105,0,20	0/1:12,0:12:27.71:28,0,33	1/1:18,1:15:9.87:114,10,0	0/0:27,0:25:63.19:0,63,815	1/1:4,0:1:2.22:7,2,0	0/0:2,0:1:0.47:0,0,1	./.	0/0:18,0:17:29.27:0,29,518	1/1:9,2:11:20.48:143,20,0	1/1:6,1:6:5.82:41,6,0	0/0:15,0:14:11.10:0,11,223	0/1:6,0:5:1.89:2,0,23	1/1:8,0:4:10.70:34,11,0	1/1:2,0:2:0.89:2,1,0
chr10	40471827	.	AC	A	1632	PASS	AB=0.958;AC=37;AF=0.740;AN=50;BaseQRankSum=2.992;DP=386;FS=1.789;HRun=1;HaplotypeScore=99.3497;InbreedingCoeff=-0.1342;MQ=45.20;MQ0=23;MQRankSum=-6.201;QD=4.41;ReadPosRankSum=-0.579;VQSLOD=0.0409;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:48,1:49:23.89:24,0,153	0/1:8,0:8:4.82:5,0,8	0/0:10,0:2:5.96:0,6,47	0/1:18,1:6:5.99:36,0,6	1/1:16,3:17:30.29:231,30,0	1/1:11,3:13:4.75:38,5,0	0/1:14,1:15:37.14:56,0,37	./.	1/1:18,0:18:9.10:64,9,0	0/1:31,0:27:27.99:28,0,135	0/1:13,0:13:7.23:7,0,94	1/1:12,3:15:38.52:284,39,0	0/1:5,1:6:3.13:40,0,3	1/1:6,0:6:10.04:49,10,0	1/1:18,0:17:12.96:186,13,0	0/1:10,1:11:11.08:81,0,11	1/1:20,0:16:20.23:192,20,0	0/1:30,0:28:15.87:16,0,50	1/1:4,0:1:2.37:8,2,0	1/1:2,0:1:2.22:7,2,0	./.	0/1:16,2:17:66.38:66,0,104	1/1:10,4:14:33.03:217,33,0	1/1:8,1:8:7.21:50,7,0	0/1:18,0:17:36.94:37,0,38	1/1:5,0:4:4.74:16,5,0	1/1:8,0:4:11.30:36,11,0	./.
chr10	40471839	.	CAAAAA	C	2279.22	PASS	AB=0.917;AC=16;AF=0.286;AN=56;BaseQRankSum=-0.059;DP=443;FS=12.024;HRun=13;HaplotypeScore=131.8363;InbreedingCoeff=0.2466;MQ=48.61;MQ0=12;MQRankSum=-4.375;QD=12.45;ReadPosRankSum=4.347;VQSLOD=-0.5881;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:71.10:0,71,698	1/1:7,2:9:24.04:313,24,0	0/0:11,0:3:2.29:0,2,6	0/0:13,0:4:3.01:0,3,52	0/0:24,0:22:17.54:0,18,126	0/0:14,0:13:5.92:0,6,26	0/0:13,0:13:11.81:0,12,77	0/0:14,0:12:12.25:0,12,67	0/0:18,0:19:18.92:0,19,74	1/1:20,11:27:63.08:917,63,0	1/1:4,6:10:27.08:385,27,0	0/1:19,0:19:27.16:27,0,41	0/1:5,0:6:9.81:45,0,10	0/0:7,0:7:3.95:0,4,48	0/0:16,0:16:4.86:0,5,27	0/0:10,0:10:5.91:0,6,24	0/1:19,0:18:10.02:10,0,51	1/1:22,4:25:42.05:596,42,0	0/1:12,0:11:13.71:14,0,69	0/1:5,0:6:3.49:3,0,17	0/0:10,0:10:8.70:0,9,54	0/0:17,0:17:38.21:0,38,361	0/0:17,0:16:12.05:0,12,135	0/1:10,0:9:2.59:3,0,11	0/0:19,0:18:20.13:0,20,153	0/1:19,0:19:11.78:12,0,42	0/1:9,0:14:18.26:122,0,18	0/0:3,0:3:1.55:0,2,4
chr10	40471843	.	A	AC	1487.95	PASS	AB=0.961;AC=19;AF=0.339;AN=56;BaseQRankSum=-0.769;DP=447;FS=9.693;HRun=0;HaplotypeScore=116.3294;InbreedingCoeff=0.0584;MQ=51.02;MQ0=10;MQRankSum=3.763;QD=5.64;ReadPosRankSum=4.337;VQSLOD=2.7675;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:50,0:50:20.90:358,21,0	0/0:10,0:10:21.59:0,22,86	0/0:11,0:4:3.85:0,4,22	0/0:12,0:4:2.30:0,2,23	0/1:24,0:22:45.60:85,0,46	0/1:13,0:12:9.38:27,0,9	0/1:13,0:13:9.55:79,0,10	0/0:16,0:15:37.17:0,37,243	0/1:21,0:21:38.33:74,0,38	0/0:30,0:26:62.36:0,62,287	0/0:11,0:11:25.03:0,25,113	0/1:19,0:19:62.90:130,0,63	0/1:6,0:6:6.60:70,0,7	0/1:9,0:9:25.31:81,0,25	0/1:15,0:15:31.89:69,0,32	0/1:12,0:12:18.12:34,0,18	0/1:9,8:17:37.47:86,0,37	0/0:25,0:23:45.32:0,45,220	0/0:12,0:11:32.34:0,32,223	0/0:7,0:7:9.80:0,10,67	0/0:10,0:10:19.16:0,19,119	1/1:17,0:17:30.40:254,30,0	0/1:15,1:16:49.39:99,0,49	1/1:12,0:11:3.56:73,4,0	1/1:18,0:18:4.40:141,4,0	0/0:21,0:20:48.22:0,48,294	0/0:14,0:12:34.88:0,35,209	0/0:4,0:4:11.88:0,12,86
chr10	40472247	.	A	AT	6378.06	PASS	AB=0.961;AC=28;AF=0.500;AN=56;BaseQRankSum=1.969;DP=571;FS=1.480;HRun=2;HaplotypeScore=73.6511;InbreedingCoeff=0.2313;MQ=63.43;MQ0=0;MQRankSum=-0.582;QD=16.07;ReadPosRankSum=2.593;VQSLOD=5.0545;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:96.27:0,96,1159	0/0:11,0:11:33.09:0,33,392	0/0:15,0:14:27.04:0,27,309	0/1:9,0:9:0.39:0,0,94	0/1:27,0:27:68.95:69,0,85	1/1:19,0:19:11.97:88,12,0	0/1:36,0:36:36.76:147,0,37	1/1:2,28:30:78.21:1046,78,0	0/1:12,0:12:32.65:33,0,46	0/0:23,0:23:66.19:0,66,786	0/0:16,0:16:45.12:0,45,543	0/1:17,0:17:12.42:70,0,12	0/1:20,0:20:6.98:94,0,7	0/1:11,0:11:4.97:50,0,5	0/1:18,0:18:9.56:73,0,10	1/1:13,0:13:2.45:55,2,0	0/1:27,0:27:50.06:107,0,50	0/0:19,0:19:54.06:0,54,586	1/1:0,23:23:66.19:879,66,0	1/1:4,23:27:65.97:845,66,0	1/1:3,18:21:43.57:644,44,0	0/0:22,0:22:66.18:0,66,784	0/1:11,0:11:0.33:47,0,0	0/1:12,0:12:21.37:49,0,21	0/0:30,0:30:87.17:0,87,997	0/1:3,20:23:8.04:794,0,8	1/1:2,18:19:42.14:599,42,0	1/1:3,18:21:48.06:689,48,0
chr10	40472249	.	T	TA	7709.02	PASS	AB=1.000;AC=37;AF=0.661;AN=56;BaseQRankSum=-1.579;DP=574;FS=0.361;HRun=9;HaplotypeScore=68.8287;InbreedingCoeff=0.8450;MQ=64.34;MQ0=0;MQRankSum=0.049;QD=19.92;ReadPosRankSum=0.779;VQSLOD=5.2389;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:98.83:0,99,842	0/0:11,0:11:29.98:0,30,260	0/0:13,0:12:8.16:0,8,98	0/0:8,0:9:3.72:0,4,50	1/1:10,17:27:54.03:561,54,0	1/1:2,18:20:26.23:476,26,0	1/1:5,32:37:64.19:936,64,0	0/1:33,0:33:13.57:292,0,14	1/1:3,9:12:24.06:266,24,0	0/0:25,0:25:59.97:0,60,519	0/0:18,0:18:44.90:0,45,379	1/1:2,14:16:42.11:464,42,0	1/1:2,19:21:51.14:564,51,0	1/1:1,11:12:24.06:266,24,0	1/1:2,16:18:45.12:498,45,0	1/1:1,13:14:33.09:365,33,0	1/1:5,22:27:66.18:730,66,0	0/0:19,0:19:38.97:0,39,338	1/1:22,0:22:52.20:319,52,0	1/1:25,0:25:32.52:327,33,0	1/1:20,0:20:0.25:203,0,0	0/0:23,0:23:62.97:0,63,543	1/1:1,10:11:29.98:314,30,0	1/1:3,10:13:30.08:332,30,0	0/0:31,0:31:68.96:0,69,599	1/1:22,0:22:11.88:281,12,0	1/1:19,0:18:27.61:236,28,0	1/1:18,0:18:46.69:279,47,0
chr10	40472811	.	T	TA	837.47	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=-3.952;DP=466;FS=9.774;HRun=8;HaplotypeScore=93.5192;InbreedingCoeff=0.4608;MQ=74.86;MQ0=0;MQRankSum=1.454;QD=7.16;ReadPosRankSum=-1.804;VQSLOD=0.4529;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:74.77:0,75,649	0/0:9,0:9:20.95:0,21,175	0/0:17,0:14:28.54:0,29,200	0/0:18,0:13:5.94:0,6,28	0/0:21,0:21:50.71:0,51,416	0/0:20,0:20:48.03:0,48,438	0/0:16,0:16:15.31:0,15,288	0/1:21,0:21:0.68:1,0,25	0/0:18,0:18:38.83:0,39,328	0/0:22,0:22:63:0,63,565	0/0:12,0:12:26.99:0,27,241	1/1:2,16:18:48.10:540,48,0	0/0:10,0:10:20.75:0,21,176	0/0:13,0:13:36.02:0,36,328	0/0:19,0:19:47.03:0,47,376	0/0:11,0:11:11.99:0,12,110	0/0:28,0:28:50.93:0,51,457	0/0:17,0:17:35.96:0,36,321	0/1:21,0:21:27.18:47,0,27	0/1:13,0:13:2.33:2,0,18	0/1:8,0:8:10.49:10,0,32	0/0:10,0:10:26.79:0,27,222	1/1:2,6:8:18.05:206,18,0	1/1:1,5:6:14.83:151,15,0	0/0:20,0:20:50.41:0,50,421	0/1:22,0:22:33.80:34,0,45	0/0:17,0:17:24.31:0,24,85	0/0:9,0:9:6.63:0,7,27
chr10	40472839	.	TTG	T	759.45	PASS	AB=0.881;AC=8;AF=0.148;AN=54;BaseQRankSum=-3.197;DP=460;FS=12.952;HRun=0;HaplotypeScore=125.1136;InbreedingCoeff=0.4405;MQ=57.71;MQ0=6;MQRankSum=4.533;QD=9.49;ReadPosRankSum=2.376;VQSLOD=2.5011;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:40:14.48:0,14,104	1/1:2,10:12:27.08:306,27,0	0/0:19,0:9:3.01:0,3,42	0/0:16,0:7:3.01:0,3,43	0/0:18,0:17:0:0,0,0	0/0:22,0:22:6.46:0,6,78	0/0:19,0:19:2.89:0,3,66	0/0:20,0:19:29.65:0,30,270	0/0:13,0:13:11.09:0,11,113	1/1:8,8:17:14.47:209,14,0	1/1:4,6:11:15.02:170,15,0	0/0:17,0:17:18.13:0,18,129	0/0:12,0:12:14.74:0,15,117	0/0:10,0:10:9.01:0,9,82	0/0:13,0:13:1.87:0,2,62	0/0:12,0:12:7.88:0,8,118	0/1:24,0:24:2.87:3,0,72	0/1:11,5:15:19.13:209,0,19	0/0:20,0:19:5.94:0,6,41	0/0:11,0:11:4.26:0,4,48	0/0:12,0:12:11.86:0,12,101	0/0:11,0:11:17.85:0,18,122	0/0:9,0:9:8.52:0,9,51	0/0:9,0:9:2.82:0,3,23	0/0:21,0:21:11.58:0,12,78	0/0:25,0:25:41.50:0,41,422	0/0:22,0:22:30.48:0,30,318	./.
chr10	40472868	.	T	TGTGTGTGCGTGC	12665.17	PASS	AB=0.562;AC=41;AF=0.732;AN=56;BaseQRankSum=-3.769;DP=533;FS=0.527;HRun=0;HaplotypeScore=163.9842;InbreedingCoeff=0.7236;MQ=53.89;MQ0=8;MQRankSum=-5.802;QD=30.82;ReadPosRankSum=0.907;VQSLOD=4.4456;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:48:21.04:375,21,0	0/0:12,0:12:30.10:0,30,823	0/0:36,0:12:24.90:0,25,370	0/0:31,0:16:35.85:0,36,616	0/1:5,11:23:0:0,0,0	1/1:6,0:22:18.06:607,18,0	1/1:7,0:21:12.04:440,12,0	1/1:26,0:25:33.44:664,33,0	1/1:2,0:18:21.07:719,21,0	0/0:14,0:14:6.97:0,7,820	0/0:10,0:10:24.55:0,25,556	1/1:8,0:13:27.09:706,27,0	1/1:4,0:13:12.04:345,12,0	1/1:0,0:6:9.03:248,9,0	1/1:4,11:18:15.05:751,15,0	1/1:1,5:13:18.06:944,18,0	0/1:9,11:27:2.74:1197,0,3	0/0:19,0:18:45.11:0,45,925	1/1:6,0:16:35.54:551,36,0	1/1:0,1:18:6.02:279,6,0	1/1:18,0:18:32.96:461,33,0	0/1:1,0:11:23.04:347,0,23	1/1:7,0:9:14.12:368,14,0	1/1:11,0:14:26.98:447,27,0	1/1:3,0:16:14.91:377,15,0	1/1:12,12:30:33.31:1512,33,0	1/1:5,1:27:36.46:1289,36,0	1/1:2,0:2:3.01:38,3,0
chr10	40473995	.	AAGAGAGAG	A	1430.62	PASS	AB=0.786;AC=13;AF=0.260;AN=50;BaseQRankSum=1.207;DP=535;FS=12.894;HRun=0;HaplotypeScore=140.7230;InbreedingCoeff=0.7935;MQ=59.84;MQ0=9;MQRankSum=-4.875;QD=12.02;ReadPosRankSum=0.712;VQSLOD=1.5307;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:33.11:0,33,855	0/0:5,0:5:6:0,6,93	./.	./.	0/0:13,0:13:6.02:0,6,185	0/0:18,0:22:21.04:0,21,356	0/0:19,0:30:36.07:0,36,739	./.	0/0:10,0:20:24.08:0,24,444	0/0:22,0:24:37.90:0,38,813	0/1:8,0:10:0.79:1,0,181	0/0:21,0:21:27.09:0,27,722	0/0:17,0:17:30.09:0,30,834	0/0:17,0:17:15.05:0,15,474	0/0:18,0:18:24.08:0,24,809	0/0:11,0:20:12.04:0,12,410	0/0:13,0:21:36.57:0,37,1106	0/0:13,0:17:18.06:0,18,381	1/1:10,2:12:7.32:197,7,0	1/1:13,9:23:24.02:462,24,0	1/1:10,8:18:3.01:71,3,0	0/0:12,0:12:15.05:0,15,314	0/0:12,0:12:9.03:0,9,191	0/0:25,0:25:15.05:0,15,424	0/0:15,0:15:27.06:0,27,734	1/1:17,4:21:9.02:194,9,0	1/1:16,7:23:11.83:295,12,0	1/1:5,6:11:15.05:372,15,0
chr10	40474038	.	A	AAC	1584.29	PASS	AB=0.864;AC=9;AF=0.161;AN=56;BaseQRankSum=1.953;DP=575;FS=0.605;HRun=0;HaplotypeScore=100.2988;InbreedingCoeff=0.6192;MQ=68.78;MQ0=6;MQRankSum=-1.014;QD=13.90;ReadPosRankSum=-0.275;VQSLOD=3.3663;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:36.96:0,37,677	0/1:9,0:8:4.06:4,0,208	0/0:18,0:13:39.09:0,39,559	0/0:28,0:20:45.16:0,45,790	0/0:25,0:24:41.19:0,41,580	0/0:15,0:15:32.66:0,33,421	0/0:22,0:22:49.71:0,50,581	0/0:36,0:35:99:0,100,1444	0/0:21,0:21:45.05:0,45,567	0/0:31,0:31:81.57:0,82,1103	0/0:9,0:7:23.59:0,24,244	1/1:2,15:18:18.05:308,18,0	0/1:9,0:29:17.28:17,0,152	0/1:18,0:18:31.61:547,0,32	0/0:24,0:24:63.05:0,63,947	0/0:22,0:21:41.68:0,42,544	0/0:24,0:24:51.30:0,51,467	0/0:19,0:19:48.57:0,49,657	0/0:18,0:17:48.52:0,49,636	0/0:20,0:20:39.88:0,40,515	0/0:25,0:25:42.53:0,43,644	0/0:17,0:17:39.10:0,39,565	1/1:19,0:19:47.41:664,47,0	1/1:1,17:21:12.30:196,12,0	0/0:20,0:19:42.06:0,42,610	0/0:13,0:13:32.82:0,33,479	0/0:23,0:23:54.33:0,54,683	0/0:9,0:9:21.90:0,22,236
chr10	40474397	.	TC	T	1612.40	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=4.186;DP=276;FS=0.579;HRun=6;HaplotypeScore=60.2947;InbreedingCoeff=0.7665;MQ=103.07;MQ0=1;MQRankSum=-3.579;QD=24.07;ReadPosRankSum=3.127;VQSLOD=3.2444;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:3,0:3:3.01:0,3,39	0/0:2,0:2:3.01:0,3,39	0/0:22,0:21:39.97:0,40,495	0/0:24,0:21:48.68:0,49,433	0/0:6,0:6:18.02:0,18,217	0/0:3,0:3:3.01:0,3,39	0/0:7,0:7:9.03:0,9,117	0/0:19,0:19:48.12:0,48,595	0/0:9,0:9:24.06:0,24,295	0/0:10,0:10:21.07:0,21,275	0/0:5,0:5:9.03:0,9,118	1/1:5,9:14:39.10:417,39,0	1/1:11,5:16:45.09:471,45,0	1/1:9,6:15:39.10:416,39,0	0/0:10,0:10:21.06:0,21,260	0/0:9,0:9:9.03:0,9,118	0/0:10,0:10:18.06:0,18,236	0/0:4,0:4:12.04:0,12,157	0/0:7,0:7:18.02:0,18,205	0/0:6,0:6:9.03:0,9,118	0/0:21,0:21:33.11:0,33,432	0/0:4,0:4:6.02:0,6,79	1/1:6,6:12:27.07:285,27,0	1/1:6,4:10:17.83:192,18,0	0/0:3,0:3:6.02:0,6,79	0/0:8,0:8:15.05:0,15,193	0/0:12,0:12:21.06:0,21,259	0/0:4,0:4:6.02:0,6,79
chr10	40474410	.	A	AC	2890.37	PASS	AB=0.754;AC=52;AF=0.929;AN=56;BaseQRankSum=-4.019;DP=269;FS=0.000;HRun=9;HaplotypeScore=55.5326;InbreedingCoeff=0.1630;MQ=88.64;MQ0=1;MQRankSum=-3.533;QD=11.42;ReadPosRankSum=1.452;VQSLOD=2.4751;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,0:5:2.88:15,3,0	1/1:0,0:3:2.84:14,3,0	0/0:15,0:14:23.33:0,23,140	0/1:19,0:17:34.19:34,0,135	1/1:2,5:7:12.02:121,12,0	1/1:0,0:3:5.81:34,6,0	1/1:2,3:15:20.29:139,20,0	1/1:7,3:10:9.02:100,9,0	1/1:8,0:8:11.30:74,11,0	1/1:8,0:11:8.67:48,9,0	1/1:4,0:4:8.29:76,8,0	1/1:13,0:20:38.87:325,39,0	1/1:9,0:15:38.92:330,39,0	1/1:10,0:13:29.94:272,30,0	1/1:2,8:10:12.03:133,12,0	1/1:2,8:10:6.02:66,6,0	1/1:2,8:11:12.01:121,12,0	1/1:2,0:4:5.81:34,6,0	1/1:0,3:3:9.01:91,9,0	1/1:5,3:9:8.98:82,9,0	1/1:7,13:20:1.04:239,1,0	1/1:0,0:4:5.72:29,6,0	1/1:7,0:14:32.92:285,33,0	1/1:4,0:8:11.52:104,12,0	1/1:3,1:4:3.01:33,3,0	1/1:4,4:8:9:90,9,0	0/1:2,7:10:17.03:57,0,17	1/1:0,4:4:6.02:66,6,0
chr10	40474845	.	TAA	T	536.39	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=7.205;DP=340;FS=6.280;HRun=2;HaplotypeScore=43.7291;InbreedingCoeff=0.8694;MQ=60.74;MQ0=16;MQRankSum=-5.615;QD=23.32;ReadPosRankSum=0.552;VQSLOD=1.7471;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:20:45.15:0,45,869	0/0:7,0:7:18.02:0,18,314	0/0:37,0:11:22.92:0,23,233	0/0:21,0:5:4.17:0,4,139	0/0:17,0:17:51.17:0,51,891	0/0:7,0:7:15.15:0,15,333	0/0:8,0:8:24.08:0,24,435	0/0:22,0:21:42.75:0,43,769	0/0:5,0:5:15.02:0,15,245	0/0:16,0:16:43.93:0,44,782	0/0:12,0:12:14.69:0,15,497	1/1:2,1:3:9:98,9,0	1/1:3,0:4:11.93:121,12,0	1/1:2,1:3:6.02:78,6,0	0/0:8,0:8:14.24:0,14,313	0/0:6,0:6:15.04:0,15,231	0/0:17,0:17:46.38:0,46,817	0/0:16,0:13:24.03:0,24,376	0/0:19,0:18:42.07:0,42,742	0/0:14,0:14:33.10:0,33,601	0/0:8,0:8:24.08:0,24,466	0/0:6,0:6:18.06:0,18,353	1/1:1,6:10:27.04:321,27,0	1/1:1,1:2:6.02:74,6,0	0/0:10,0:10:27.09:0,27,530	0/0:16,0:16:42.08:0,42,798	0/0:14,0:13:36.08:0,36,667	0/0:10,0:9:24:0,24,466
chr10	40474860	.	T	TGG	45.20	PASS	AB=0.843;AC=5;AF=0.089;AN=56;BaseQRankSum=1.336;DP=396;FS=21.120;HRun=0;HaplotypeScore=52.6503;InbreedingCoeff=0.1390;MQ=54.12;MQ0=24;MQRankSum=-3.588;QD=1.33;ReadPosRankSum=2.182;VQSLOD=-0.0070;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:24:60.14:0,60,777	0/0:7,0:7:21.07:0,21,314	0/0:35,0:8:11.73:0,12,118	0/0:29,0:8:16.71:0,17,140	0/0:17,0:17:48.16:0,48,640	0/0:13,0:12:33.11:0,33,460	0/0:10,0:10:30.10:0,30,443	0/0:28,0:27:70.40:0,70,902	0/0:5,0:4:12.04:0,12,162	0/0:15,0:15:45.15:0,45,662	0/0:16,0:16:45.13:0,45,596	0/1:5,3:8:4.09:71,0,4	0/1:5,0:5:7.94:20,0,8	0/1:5,1:6:22.95:50,0,23	0/0:6,0:6:15.04:0,15,200	0/0:5,0:5:15.03:0,15,211	0/0:24,0:24:72.21:0,72,961	0/0:18,0:15:24.08:0,24,331	0/0:22,0:20:57.13:0,57,780	0/0:15,0:15:39.13:0,39,540	0/0:11,0:11:33.09:0,33,471	0/0:4,0:4:12.04:0,12,157	0/1:10,1:11:3.65:4,0,24	0/1:2,1:3:5.85:9,0,6	0/0:12,0:12:33.09:0,33,480	0/0:15,0:15:42.14:0,42,611	0/0:14,0:12:30.10:0,30,414	0/0:13,0:11:30.08:0,30,397
chr10	40475159	.	AC	A	2774.15	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=12.963;DP=647;FS=7.492;HRun=2;HaplotypeScore=67.9618;InbreedingCoeff=0.9890;MQ=74.75;MQ0=0;MQRankSum=-2.813;QD=34.25;ReadPosRankSum=2.115;VQSLOD=3.9765;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,126,1885	0/0:12,0:12:33.11:0,33,495	0/0:21,0:21:56.78:0,57,798	0/0:31,0:28:75.22:0,75,1044	0/0:25,0:25:72.24:0,72,1079	0/0:19,0:19:57.19:0,57,851	0/0:29,0:29:81.26:0,81,1193	0/0:29,0:28:78.26:0,78,1151	0/0:17,0:17:51.17:0,51,762	0/0:31,0:31:90.30:0,90,1345	0/0:15,0:15:45.14:0,45,655	1/1:0,29:29:84.27:1091,84,0	0/0:20,0:20:60.20:0,60,898	0/0:19,0:19:57.19:0,57,851	0/0:26,0:26:75.24:0,75,1104	0/0:15,0:15:45.15:0,45,674	0/0:22,0:22:66.22:0,66,989	0/0:18,0:18:54.17:0,54,789	0/0:9,0:9:27.09:0,27,404	0/0:14,0:14:42.14:0,42,629	0/0:29,0:29:87.28:0,87,1281	0/0:34,0:34:99:0,102,1528	1/1:1,25:26:66.21:856,66,0	1/1:0,26:26:75.24:970,75,0	0/0:17,0:16:51.17:0,51,763	0/0:28,0:28:81.27:0,81,1214	0/0:27,0:26:75.21:0,75,1099	0/0:16,1:17:12.22:0,12,680
chr10	40475710	.	C	CT	1001.68	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-4.529;DP=585;FS=4.858;HRun=2;HaplotypeScore=64.4830;InbreedingCoeff=0.9964;MQ=92.92;MQ0=0;MQRankSum=-0.714;QD=32.31;ReadPosRankSum=3.315;VQSLOD=3.6108;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:35:99:0,99,1213	0/0:8,0:8:24.08:0,24,298	0/0:30,0:30:68.52:0,69,839	0/0:24,0:24:62.81:0,63,744	0/0:21,0:21:54.17:0,54,668	0/0:25,0:25:69.19:0,69,830	0/0:29,0:29:78.24:0,78,965	0/0:30,0:30:75.22:0,75,909	0/0:11,0:11:33.08:0,33,395	0/0:29,0:29:78.20:0,78,940	0/0:8,0:8:21.07:0,21,260	0/0:24,0:24:69.19:0,69,836	1/1:2,11:13:33.11:475,33,0	1/1:1,17:18:45.15:648,45,0	0/0:19,0:19:48.15:0,48,595	0/0:14,0:14:36.11:0,36,446	0/0:29,0:29:78.25:0,78,967	0/0:19,0:19:57.18:0,57,707	0/0:13,0:13:39.12:0,39,483	0/0:30,0:30:84.26:0,84,1040	0/0:21,0:21:51.14:0,51,619	0/0:21,0:21:57.18:0,57,707	0/0:16,0:16:45.13:0,45,545	0/0:28,0:28:75.24:0,75,929	0/0:19,0:18:51.15:0,51,618	0/0:22,0:22:60.19:0,60,744	0/0:15,0:15:39.12:0,39,483	0/0:13,0:13:39.12:0,39,483
chr10	40475783	.	A	AGT	1804.07	PASS	AB=0.937;AC=35;AF=0.673;AN=52;BaseQRankSum=-1.506;DP=532;FS=3.337;HRun=0;HaplotypeScore=117.9490;InbreedingCoeff=0.1881;MQ=56.09;MQ0=7;MQRankSum=-0.551;QD=4.52;ReadPosRankSum=-0.233;VQSLOD=3.0056;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:26,4:29:32.29:222,0,32	1/1:5,0:6:2.92:17,3,0	./.	./.	0/0:14,0:17:4.40:0,4,18	1/1:21,0:21:14.95:144,15,0	1/1:22,1:29:9.01:97,9,0	1/1:13,0:12:2.97:20,3,0	1/1:13,1:20:5.81:46,6,0	1/1:18,0:24:23.78:182,24,0	1/1:15,0:15:2.89:24,3,0	0/1:10,0:15:8.17:11,0,8	0/0:12,0:14:0.55:0,1,26	0/0:10,0:11:2.84:0,3,14	0/0:14,0:17:11.59:0,12,52	0/0:10,0:15:11.36:0,11,56	0/1:29,0:32:18.29:18,0,48	1/1:17,0:18:22.01:165,22,0	1/1:20,0:19:9.03:133,9,0	1/1:6,3:9:6.02:89,6,0	0/1:33,1:34:2.66:215,0,3	0/1:12,3:15:20.69:175,0,21	0/1:13,0:20:0:0,0,0	1/1:16,0:25:2.71:23,3,0	1/1:12,0:12:9.02:114,9,0	1/1:12,2:14:9.50:134,10,0	1/1:8,10:18:2.87:45,3,0	0/1:6,1:6:23.39:80,0,23
chr10	40476116	.	TAA	T	420.69	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=0.986;DP=478;FS=0.875;HRun=5;HaplotypeScore=68.7214;InbreedingCoeff=0.9003;MQ=68.32;MQ0=22;MQRankSum=1.916;QD=8.95;ReadPosRankSum=2.169;VQSLOD=-0.6164;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,24:24:6.02:83,6,0	0/0:8,0:6:13.08:0,13,92	0/0:32,0:20:43.39:0,43,516	0/0:30,0:19:36.75:0,37,380	0/0:16,0:16:42.01:0,42,451	0/0:31,0:31:72.68:0,73,605	0/0:18,0:18:40.01:0,40,317	0/0:22,0:21:57.08:0,57,546	0/0:28,0:27:52.32:0,52,396	0/0:31,0:29:69.59:0,70,557	0/0:8,0:8:23.11:0,23,172	0/0:14,0:14:38.67:0,39,277	0/0:8,0:10:29.99:0,30,316	0/0:4,0:8:6.01:0,6,56	0/0:15,0:14:35.52:0,36,405	0/0:9,0:9:24.05:0,24,305	0/0:25,0:22:65.86:0,66,806	0/0:11,0:11:32.90:0,33,265	0/0:18,0:17:51.06:0,51,552	0/0:12,0:11:29.81:0,30,313	0/0:18,0:17:39:0,39,354	1/1:11,0:10:23.98:226,24,0	0/0:11,0:10:25.68:0,26,156	0/0:14,0:13:11.87:0,12,80	1/1:11,0:10:29.20:245,29,0	0/0:17,0:16:48.05:0,48,511	0/0:14,0:13:33.02:0,33,307	0/0:7,0:6:18.01:0,18,230
chr10	40476120	.	AACACACAC	A	960.64	PASS	AB=0.727;AC=10;AF=0.217;AN=46;BaseQRankSum=4.495;DP=525;FS=1.060;HRun=0;HaplotypeScore=120.0979;InbreedingCoeff=0.5739;MQ=62.84;MQ0=26;MQRankSum=-5.971;QD=7.06;ReadPosRankSum=1.246;VQSLOD=2.4242;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:30:12.04:0,12,372	1/1:5,0:6:6.02:112,6,0	./.	0/0:28,0:17:1.55:0,2,4	0/0:16,0:16:30.10:0,30,961	0/1:25,14:39:14.59:141,0,15	0/1:14,9:23:50.17:174,0,50	0/0:23,0:22:9.03:0,9,274	1/1:12,15:26:18.06:430,18,0	1/1:21,0:27:9.03:167,9,0	1/1:5,0:9:6:80,6,0	./.	0/0:15,0:13:24.08:0,24,665	0/0:9,0:7:9.03:0,9,214	0/0:17,0:16:26.96:0,27,799	0/0:10,0:10:18.06:0,18,654	0/0:29,0:26:51.18:0,51,1830	./.	0/0:23,0:22:28.45:0,28,855	0/0:12,0:11:12.04:0,12,384	0/0:18,0:23:15.05:0,15,401	0/0:13,0:12:15.05:0,15,386	./.	./.	0/0:11,0:10:6.02:0,6,178	0/0:22,0:20:36.12:0,36,1053	0/0:13,0:16:12.04:0,12,353	0/0:7,0:6:12.04:0,12,360
chr10	40477898	.	C	CTTGT	8400.03	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-14.445;DP=821;FS=9.358;HRun=0;HaplotypeScore=138.3234;InbreedingCoeff=0.9647;MQ=70.73;MQ0=2;MQRankSum=0.511;QD=39.07;ReadPosRankSum=-0.542;VQSLOD=4.6611;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:96.27:0,96,1549	0/0:19,0:19:33.11:0,33,535	0/0:40,0:32:36.08:0,36,511	0/0:31,0:29:38.70:0,39,637	1/1:8,19:28:45.58:1036,46,0	1/1:6,11:17:30.10:724,30,0	1/1:15,20:38:30.20:1202,30,0	0/0:37,0:36:45.10:0,45,579	1/1:10,26:37:72.25:1726,72,0	0/0:35,0:36:81.25:0,81,1229	0/0:21,0:21:51.15:0,51,771	0/0:4,0:28:57.06:0,57,527	0/0:10,0:26:33.01:0,33,300	0/0:3,0:24:54.05:0,54,500	1/1:9,22:32:2.57:1102,3,0	1/1:7,17:25:51.18:1232,51,0	1/1:9,27:36:57.20:1378,57,0	0/0:19,0:19:41.83:0,42,615	0/0:22,0:22:27.06:0,27,387	0/0:35,0:35:81.24:0,81,1239	0/0:30,0:30:60.19:0,60,945	0/0:23,0:23:51.13:0,51,753	0/0:6,0:25:32.88:0,33,307	0/0:9,0:40:87.10:0,87,810	0/0:31,0:31:75.21:0,75,1141	0/0:30,0:30:57.18:0,57,900	0/0:32,0:32:66.17:0,66,970	0/0:9,0:9:27.09:0,27,425
chr10	40478436	.	G	GGTGT	2717.78	PASS	AB=0.881;AC=28;AF=0.538;AN=52;BaseQRankSum=0.000;DP=600;FS=14.860;HRun=0;HaplotypeScore=121.4068;InbreedingCoeff=0.2013;MQ=64.26;MQ0=14;MQRankSum=-0.841;QD=6.79;ReadPosRankSum=-1.261;VQSLOD=1.4671;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:16,6:24:3.48:71,3,0	0/0:7,0:9:4.17:0,4,53	./.	./.	0/1:14,8:24:9.91:266,0,10	0/0:10,0:12:9:0,9,81	0/0:29,0:35:3.35:0,3,118	1/1:27,0:27:9:105,9,0	0/0:6,0:14:18.02:0,18,168	0/0:26,0:26:1.36:0,1,2	0/0:6,0:8:6.01:0,6,56	1/1:29,1:31:23.60:448,24,0	0/1:15,0:15:8.82:9,0,126	0/0:10,0:10:9:0,9,96	1/1:11,0:14:6.02:113,6,0	0/1:11,4:19:13.41:122,0,13	1/1:20,14:36:7.89:476,8,0	0/0:10,0:11:3:0,3,28	1/1:26,0:26:18.44:248,18,0	1/1:14,0:13:3:25,3,0	0/1:30,0:32:18.19:40,0,18	0/1:21,0:22:24.56:25,0,142	0/1:12,0:15:0.01:0,0,0	0/1:22,1:22:25.14:293,0,25	0/1:13,0:14:42.23:42,0,77	1/1:25,0:27:26.32:445,26,0	1/1:16,0:16:2.03:5,2,0	1/1:15,0:17:9.03:145,9,0
chr10	40478881	.	TGTGTATGGGAGCTTGCATGGATCCATCCAGAG	T	12916.88	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=11.767;DP=709;FS=5.172;HRun=0;HaplotypeScore=522.6244;InbreedingCoeff=0.9729;MQ=89.49;MQ0=0;MQRankSum=-11.623;QD=137.41;ReadPosRankSum=6.615;VQSLOD=3.7125;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:60,0:60:99:0,181,20152	0/0:9,0:9:27.09:0,27,3639	0/0:19,0:19:57.20:0,57,3239	0/0:38,0:38:99:0,111,7330	0/0:32,0:32:96.30:0,96,11199	0/0:28,0:28:84.29:0,84,10381	0/0:28,0:28:84.29:0,84,10077	0/0:47,0:47:99:0,141,10249	0/0:14,0:14:42.14:0,42,4933	0/0:36,0:36:99:0,105,12833	0/0:17,0:17:51.16:0,51,6339	1/1:0,29:29:45.15:3875,45,0	1/1:0,18:18:30.10:2583,30,0	1/1:0,19:19:39.13:3358,39,0	0/0:24,0:24:72.25:0,72,9487	0/0:26,0:26:78.25:0,78,10742	0/0:27,0:27:81.28:0,81,10161	0/0:20,0:20:60.21:0,60,6233	0/0:24,0:24:72.21:0,72,6245	0/0:28,0:28:84.29:0,84,11508	0/0:41,0:41:99:0,123,14915	0/0:21,0:21:63.19:0,63,6108	1/1:0,14:14:30.10:2583,30,0	1/1:0,14:14:6.02:517,6,0	0/0:19,0:19:57.20:0,57,7208	0/0:27,0:27:81.28:0,81,9813	0/0:24,0:24:72.25:0,72,10391	0/0:6,0:6:18.06:0,18,1572
chr10	40479949	.	TA	T	642.97	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=7.394;DP=386;FS=1.759;HRun=1;HaplotypeScore=70.9827;InbreedingCoeff=0.9444;MQ=74.28;MQ0=2;MQRankSum=-0.637;QD=10.37;ReadPosRankSum=3.826;VQSLOD=1.7259;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:27.09:0,27,430	0/0:7,0:7:21.06:0,21,307	0/0:10,0:10:23.72:0,24,427	0/0:10,0:8:20.88:0,21,261	0/0:14,0:14:42.11:0,42,631	0/0:15,0:15:27.08:0,27,385	0/0:15,0:15:19.19:0,19,571	0/0:20,0:20:54.18:0,54,820	0/0:24,0:24:42.10:0,42,565	0/0:21,0:20:60.08:0,60,809	0/0:10,0:10:26.98:0,27,382	1/1:14,1:15:37.66:211,38,0	1/1:16,0:16:18.50:182,18,0	1/1:14,0:14:9.31:138,9,0	0/0:11,0:11:33.11:0,33,496	0/0:21,0:21:60.17:0,60,889	0/0:18,0:17:51.08:0,51,697	0/0:14,0:14:23.95:0,24,299	0/0:15,0:15:43.94:0,44,607	0/0:14,2:16:39.07:0,39,567	0/0:22,0:21:57.19:0,57,909	0/0:6,0:6:18.03:0,18,241	1/1:9,0:9:25.58:156,26,0	1/1:8,0:8:20.43:126,20,0	0/0:8,0:8:24.08:0,24,359	0/0:14,1:15:4.33:0,4,622	0/0:13,0:13:36.12:0,36,571	0/0:10,0:10:30.10:0,30,466
chr10	40479950	.	AC	A	1883.66	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=5.298;DP=397;FS=3.959;HRun=3;HaplotypeScore=72.7497;InbreedingCoeff=0.9744;MQ=73.31;MQ0=3;MQRankSum=-1.558;QD=30.88;ReadPosRankSum=2.514;VQSLOD=3.6774;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:23.18:0,23,369	0/0:7,0:7:19.29:0,19,225	0/0:10,0:10:25.06:0,25,372	0/0:10,0:8:18.05:0,18,226	0/0:15,0:15:39.10:0,39,518	0/0:14,0:14:24.05:0,24,281	0/0:16,0:15:37.30:0,37,404	0/0:22,0:22:51.16:0,51,708	0/0:24,0:24:35.78:0,36,425	0/0:11,0:20:49.77:0,50,522	0/0:10,0:10:21.96:0,22,249	1/1:2,11:15:45.01:527,45,0	1/1:1,15:16:42.05:519,42,0	1/1:2,11:13:36.06:424,36,0	0/0:12,0:12:33.02:0,33,362	0/0:22,0:22:57.04:0,57,643	0/0:20,0:19:45.42:0,45,537	0/0:5,0:14:15.99:0,16,201	0/0:15,0:15:37.93:0,38,501	0/0:18,0:18:38.12:0,38,519	0/0:22,0:21:57.19:0,57,816	0/0:6,0:6:12.04:0,12,170	1/1:1,7:9:27.08:330,27,0	1/1:1,5:8:21.07:259,21,0	0/0:9,0:9:24.92:0,25,319	0/0:16,0:16:11.32:0,11,563	0/0:13,0:13:38.33:0,38,505	0/0:10,0:10:30.10:0,30,427
chr10	40479971	.	CCCTCCCTTCCTT	C	1460.44	PASS	AB=1.000;AC=19;AF=0.352;AN=54;BaseQRankSum=-1.072;DP=353;FS=1.084;HRun=0;HaplotypeScore=139.9901;InbreedingCoeff=-0.2472;MQ=51.48;MQ0=8;MQRankSum=3.147;QD=6.64;ReadPosRankSum=0.343;VQSLOD=2.6839;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:4,0:4:58.24:58,0,58	0/1:5,0:5:9.94:10,0,193	./.	0/0:3,0:2:2.98:0,3,21	0/1:13,0:13:37.91:38,0,286	1/1:2,9:11:6.09:37,6,0	0/1:21,0:20:88.33:390,0,88	0/0:19,0:17:17.27:0,17,166	1/1:1,21:22:14.41:273,14,0	0/1:18,0:17:99:131,0,499	0/1:14,0:14:80.80:81,0,386	0/1:16,0:16:99:135,0,118	0/0:17,0:17:45.83:0,46,1181	0/0:14,0:14:15.93:0,16,186	0/1:12,0:12:99:102,0,328	0/1:19,0:19:93.88:94,0,1225	0/1:22,0:21:94.04:94,0,519	0/1:12,0:12:5.31:5,0,176	0/1:12,0:11:4.52:5,0,228	0/0:17,0:17:35.48:0,35,471	0/0:18,0:16:42.79:0,43,984	0/1:2,0:2:19.98:28,0,20	0/1:8,0:8:17.76:103,0,18	0/1:9,0:9:37.34:37,0,73	0/0:3,0:3:3.44:0,3,21	0/0:18,0:18:45.06:0,45,929	0/0:15,0:14:18.09:0,18,906	0/0:9,0:8:18.04:0,18,356
chr10	40480014	.	TTC	T	127.82	PASS	AB=0.864;AC=5;AF=0.089;AN=56;BaseQRankSum=6.233;DP=474;FS=1.488;HRun=0;HaplotypeScore=101.7529;InbreedingCoeff=-0.1065;MQ=54.40;MQ0=16;MQRankSum=-0.981;QD=1.68;ReadPosRankSum=-1.620;VQSLOD=1.8199;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:19.98:0,20,446	0/1:6,3:9:52.32:58,0,52	0/0:27,0:8:20.36:0,20,283	0/0:26,0:15:39.08:0,39,520	0/0:20,0:20:31.84:0,32,182	0/0:9,0:9:12.04:0,12,163	0/0:24,0:24:59.89:0,60,632	0/0:22,0:21:60.08:0,60,806	0/0:25,0:25:22.95:0,23,440	0/1:16,3:19:93.63:94,0,101	0/1:10,2:12:21.03:21,0,67	0/0:17,0:17:10.73:0,11,101	0/0:17,3:20:36.11:0,36,500	0/0:16,0:16:6.01:0,6,88	0/0:14,0:14:8.39:0,8,90	0/0:16,0:16:26.23:0,26,473	0/0:21,0:21:12.58:0,13,195	0/1:14,3:17:50.23:50,0,109	0/0:20,0:16:48.13:0,48,640	0/0:15,0:15:36.01:0,36,506	0/0:21,0:21:54.98:0,55,752	0/0:8,0:8:24.07:0,24,317	0/0:9,0:9:5.42:0,5,36	0/1:19,0:19:15.94:22,0,16	0/0:6,0:6:15.05:0,15,208	0/0:17,0:17:51.17:0,51,816	0/0:24,0:23:69.23:0,69,1072	0/0:7,0:7:20.56:0,21,286
chr10	40480017	.	C	CTCTG	5940.89	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=4.620;DP=490;FS=12.716;HRun=0;HaplotypeScore=111.9204;InbreedingCoeff=0.9096;MQ=54.84;MQ0=15;MQRankSum=-1.778;QD=27.25;ReadPosRankSum=3.349;VQSLOD=3.9404;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:42.13:0,42,650	1/1:9,0:9:21.04:445,21,0	0/0:30,0:11:16.83:0,17,218	0/0:27,0:16:17.94:0,18,454	1/1:2,19:23:36.12:666,36,0	0/0:10,0:10:12.04:0,12,194	0/0:22,0:23:53.15:0,53,755	0/0:20,0:20:30.10:0,30,484	0/0:26,0:26:36.11:0,36,556	1/1:18,0:18:42.14:980,42,0	1/1:13,0:13:27.05:526,27,0	1/1:17,0:17:36.12:646,36,0	1/1:20,0:20:36.11:643,36,0	1/1:15,0:15:3.01:56,3,0	1/1:2,13:16:3.01:69,3,0	1/1:7,9:16:2.96:69,3,0	1/1:6,17:23:18.06:373,18,0	1/1:17,0:17:33.11:745,33,0	0/0:19,0:16:21.04:0,21,292	0/0:16,0:16:27.09:0,27,434	0/0:21,0:21:39.13:0,39,628	0/0:8,0:8:24.08:0,24,386	1/1:11,0:11:17.09:274,17,0	1/1:20,0:20:22.70:448,23,0	0/0:6,0:6:15.05:0,15,241	0/0:17,0:17:39.13:0,39,626	0/0:23,0:22:57.18:0,57,901	0/0:9,0:9:12.04:0,12,190
chr10	40480041	.	G	GTCTGTCTA	4586.14	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=6.278;DP=581;FS=10.168;HRun=0;HaplotypeScore=150.0966;InbreedingCoeff=0.5124;MQ=68.56;MQ0=3;MQRankSum=-4.239;QD=19.60;ReadPosRankSum=3.819;VQSLOD=3.5587;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:54.12:0,54,1225	1/1:9,0:9:19.10:149,19,0	0/0:34,0:25:64.09:0,64,852	0/0:34,0:27:68.53:0,69,1154	0/1:29,0:29:13.88:14,0,182	0/0:10,0:10:27.01:0,27,457	0/0:29,0:29:81.01:0,81,1459	0/0:26,0:26:71.95:0,72,1178	0/0:23,0:23:42.11:0,42,1019	0/1:25,0:25:99:151,0,158	0/1:15,0:15:15.95:163,0,16	1/1:0,22:25:36.12:1513,36,0	1/1:15,0:18:51.08:547,51,0	1/1:0,0:21:3.01:32,3,0	0/0:24,0:24:12.92:0,13,205	0/0:18,0:18:1.66:0,2,128	0/1:26,0:26:25.59:26,0,113	0/1:19,0:19:99:108,0,111	0/0:16,0:16:45.01:0,45,680	0/0:11,0:11:32.46:0,32,794	0/0:22,0:22:65.68:0,66,1304	0/0:12,0:12:36.07:0,36,776	1/1:0,18:23:15.36:641,15,0	1/1:4,14:24:30.10:1243,30,0	0/0:7,0:7:21.05:0,21,473	0/0:25,0:25:66.16:0,66,1321	0/0:28,0:28:84.15:0,84,1825	0/0:6,0:6:17.98:0,18,379
chr10	40480457	.	TG	T	1132.74	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=2.888;DP=506;FS=2.588;HRun=9;HaplotypeScore=71.2370;InbreedingCoeff=0.7169;MQ=76.38;MQ0=1;MQRankSum=0.548;QD=15.52;ReadPosRankSum=1.465;VQSLOD=4.0167;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,1:22:35.71:0,36,654	0/0:9,0:9:8.74:0,9,51	0/0:13,0:10:13.78:0,14,112	0/1:16,0:15:16.80:17,0,56	0/0:17,0:17:51.11:0,51,555	1/1:1,12:13:30.02:275,30,0	1/1:3,23:26:66.03:604,66,0	0/0:21,0:21:42.10:0,42,468	1/1:4,14:18:42.02:384,42,0	0/0:9,0:9:2.97:0,3,20	0/0:5,0:5:5.82:0,6,36	0/0:5,0:22:39.77:0,40,202	0/0:15,0:16:41.96:0,42,464	0/0:23,1:24:38.78:0,39,700	0/0:23,0:23:66.19:0,66,760	0/0:28,0:28:69.20:0,69,796	0/0:31,0:31:71.45:0,71,893	0/0:5,0:20:28.41:0,28,144	0/0:20,0:20:48.11:0,48,540	0/0:14,0:14:36.09:0,36,402	0/0:39,0:39:99:0,108,1224	0/0:16,0:16:27.08:0,27,309	0/0:5,0:10:5.85:0,6,49	0/0:4,0:19:42.65:0,43,217	0/0:19,0:19:54.12:0,54,587	0/0:21,0:21:48.13:0,48,545	0/0:6,0:7:14.88:0,15,153	0/0:8,0:8:21.06:0,21,242
chr10	40480654	.	AACACAC	A	165.40	PASS	AB=0.861;AC=12;AF=0.250;AN=48;BaseQRankSum=2.832;DP=586;FS=7.685;HRun=0;HaplotypeScore=144.2109;InbreedingCoeff=0.4524;MQ=61.57;MQ0=13;MQRankSum=-0.770;QD=1.31;ReadPosRankSum=0.698;VQSLOD=2.3361;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:38:3.01:41,3,0	0/0:9,0:10:9.07:0,9,176	./.	./.	1/1:7,6:13:8.35:61,8,0	0/0:15,0:20:27.08:0,27,506	0/0:28,0:27:21.88:0,22,448	0/0:21,0:19:12.94:0,13,82	0/0:12,0:22:9.39:0,9,157	0/0:15,0:14:12.02:0,12,240	0/0:15,0:15:15.03:0,15,338	1/1:11,0:11:3.01:42,3,0	0/0:12,0:12:12.58:0,13,70	0/0:10,0:10:2.80:0,3,13	0/0:18,9:26:0.47:0,0,1	0/0:14,10:24:0.08:0,0,86	1/1:15,10:24:3.01:55,3,0	0/0:13,0:14:27.07:0,27,594	0/0:20,0:19:15.01:0,15,282	0/0:11,0:12:12.64:0,13,303	0/0:69,0:68:60.10:0,60,1257	0/1:8,0:13:19.42:36,0,19	./.	./.	1/1:5,0:12:2.33:41,2,0	0/0:24,0:24:45.49:0,45,810	0/0:23,0:23:24.08:0,24,598	0/1:12,0:12:25.36:25,0,585
chr10	40480702	.	CAT	C	2680.37	PASS	AB=0.905;AC=23;AF=0.411;AN=56;BaseQRankSum=1.018;DP=598;FS=0.394;HRun=0;HaplotypeScore=102.1107;InbreedingCoeff=0.6815;MQ=58.56;MQ0=21;MQRankSum=-3.081;QD=9.06;ReadPosRankSum=0.017;VQSLOD=2.9764;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:49.27:0,49,365	0/0:14,0:14:32.09:0,32,283	0/0:34,0:18:43.35:0,43,469	0/0:44,0:24:65.18:0,65,690	0/0:11,0:11:17.82:0,18,129	0/1:22,0:22:10.44:10,0,234	0/0:31,0:30:73.11:0,73,663	1/1:23,0:21:50.58:414,51,0	0/1:22,0:21:3.93:4,0,187	0/0:16,0:15:24.84:0,25,281	0/0:16,0:16:38.97:0,39,355	1/1:13,0:13:20.86:161,21,0	1/1:10,0:10:22.25:174,22,0	1/1:16,0:15:29.76:241,30,0	0/0:18,0:17:17.11:0,17,146	0/0:20,0:21:30.46:0,30,258	0/0:19,0:19:23.05:0,23,173	0/0:18,0:18:25.59:0,26,407	1/1:3,15:18:42.23:326,42,0	1/1:14,1:15:3.26:168,3,0	1/1:72,0:70:3.99:687,4,0	0/0:9,0:9:10.55:0,11,101	0/1:1,9:9:0.22:0,0,0	1/1:16,0:15:17.96:144,18,0	0/0:17,0:17:24.41:0,24,193	0/1:25,0:25:12.98:180,0,13	0/1:13,0:13:1.08:157,0,1	1/1:21,0:19:15.42:211,15,0
chr10	40481778	.	AACACACACACAC	A	3032.75	PASS	AB=0.900;AC=27;AF=0.519;AN=52;BaseQRankSum=6.651;DP=499;FS=2.409;HRun=0;HaplotypeScore=169.2284;InbreedingCoeff=0.7352;MQ=57.29;MQ0=17;MQRankSum=-3.914;QD=13.98;ReadPosRankSum=0.518;VQSLOD=2.5089;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:25:9.03:0,9,450	0/0:9,0:9:15.05:0,15,801	./.	./.	1/1:7,7:14:17.38:144,17,0	1/1:4,0:12:18.01:438,18,0	1/1:13,0:19:9.03:251,9,0	0/1:16,0:18:12.87:13,0,23	1/1:9,0:13:15.05:419,15,0	0/0:8,0:8:10.59:0,11,379	0/0:11,0:12:15.03:0,15,619	0/0:20,0:19:9.03:0,9,326	0/0:12,0:11:18.01:0,18,801	0/0:17,0:18:30.10:0,30,1360	1/1:14,6:23:21.07:644,21,0	1/1:7,9:16:12.04:412,12,0	1/1:16,0:14:9.02:111,9,0	0/0:18,0:19:33.09:0,33,1400	1/1:12,0:11:1.60:36,2,0	1/1:10,0:15:6.49:169,6,0	1/1:23,0:23:8.07:64,8,0	0/0:20,0:26:13.84:0,14,780	0/0:9,0:10:2.99:0,3,135	0/0:35,0:34:14.87:0,15,612	0/0:16,0:24:9.03:0,9,390	1/1:11,0:14:6.01:108,6,0	1/1:10,0:15:8.75:251,9,0	1/1:4,0:5:6.02:167,6,0
chr10	40483194	.	G	GT	2685.78	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=0.888;DP=607;FS=6.469;HRun=7;HaplotypeScore=65.4807;InbreedingCoeff=0.9986;MQ=86.46;MQ0=0;MQRankSum=-1.491;QD=26.59;ReadPosRankSum=1.540;VQSLOD=4.4651;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:36:99:0,101,937	0/0:14,0:14:39.06:0,39,376	0/0:16,0:16:38.93:0,39,346	0/0:26,0:26:39.15:0,39,444	0/0:22,0:22:60.09:0,60,579	0/0:18,0:18:54.05:0,54,506	0/0:16,0:16:42.05:0,42,396	0/0:28,0:28:66.03:0,66,607	0/0:27,0:27:78.11:0,78,747	0/0:34,0:34:90.13:0,90,865	0/0:19,0:19:50.21:0,50,491	1/1:3,22:25:57.17:689,57,0	1/1:6,20:26:57.17:685,57,0	1/1:0,19:19:57.17:689,57,0	0/0:27,0:27:72.11:0,72,695	0/0:19,0:19:54.07:0,54,515	0/0:23,0:23:54.06:0,54,515	0/0:19,0:19:51.05:0,51,485	0/0:17,0:17:48.06:0,48,458	0/0:32,0:32:84.13:0,84,811	0/0:23,0:23:60.08:0,60,574	0/0:16,0:16:42.06:0,42,405	1/1:0,12:12:24.96:291,25,0	1/1:3,16:19:42.13:507,42,0	0/0:16,0:16:39.06:0,39,377	0/0:26,0:26:75.12:0,75,724	0/0:24,0:24:72.09:0,72,684	0/0:8,0:8:21.03:0,21,203
chr10	40483807	.	T	TTC	1916.44	PASS	AB=0.808;AC=32;AF=0.640;AN=50;BaseQRankSum=-2.160;DP=577;FS=23.898;HRun=0;HaplotypeScore=113.8573;InbreedingCoeff=0.3980;MQ=63.21;MQ0=6;MQRankSum=-0.918;QD=4.71;ReadPosRankSum=-2.780;VQSLOD=0.9442;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:23:14.67:0,15,70	0/1:10,0:10:0:0,0,0	./.	./.	1/1:11,8:20:6.02:89,6,0	0/1:17,4:22:20.75:122,0,21	0/1:11,6:20:26.68:165,0,27	1/1:42,0:41:11.56:53,12,0	0/1:14,2:16:26.60:39,0,27	1/1:22,0:22:16.43:181,16,0	1/1:17,0:23:5.65:56,6,0	1/1:15,1:25:9.45:74,9,0	1/1:21,0:21:4.82:31,5,0	0/1:9,6:15:0:0,0,0	1/1:14,3:28:21.02:220,21,0	1/1:12,8:22:18.04:231,18,0	0/0:21,0:32:28.53:0,29,135	0/0:6,0:10:2.84:0,3,14	1/1:9,0:9:8.69:66,9,0	1/1:19,0:19:8.62:70,9,0	0/0:20,0:20:2.90:0,3,33	0/0:14,0:22:13.26:0,13,88	./.	0/1:15,7:25:75.22:158,0,75	0/0:10,0:14:14.20:0,14,70	1/1:14,0:21:32.84:280,33,0	1/1:13,1:20:9.02:105,9,0	1/1:24,0:24:2.25:141,2,0
chr10	40484364	.	A	AT	2893.17	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=0.953;DP=557;FS=1.942;HRun=1;HaplotypeScore=89.5685;InbreedingCoeff=0.9837;MQ=75.55;MQ0=2;MQRankSum=-4.943;QD=12.05;ReadPosRankSum=1.684;VQSLOD=2.3701;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,108,939	0/0:9,0:9:21.02:0,21,216	0/0:17,0:16:35.46:0,35,282	0/0:13,0:11:14.27:0,14,110	1/1:28,1:29:60.53:322,61,0	0/0:19,0:18:44.99:0,45,454	0/0:24,0:24:50.98:0,51,511	1/1:17,0:17:41.37:244,41,0	0/0:15,0:15:36.39:0,36,412	0/0:19,0:19:45.03:0,45,485	0/0:21,0:21:54.86:0,55,552	0/0:23,0:23:49.89:0,50,295	0/0:16,0:16:39.41:0,39,386	0/0:17,0:17:36:0,36,335	1/1:25,0:25:62.62:377,63,0	1/1:13,0:13:33.21:222,33,0	1/1:34,0:34:66.04:323,66,0	0/0:21,0:21:50.99:0,51,514	1/1:19,1:20:26.98:275,27,0	1/1:20,1:21:46.61:273,47,0	1/1:19,0:18:33.18:207,33,0	0/0:18,0:18:50.89:0,51,436	0/0:8,0:8:6.95:0,7,62	0/0:17,0:16:25.22:0,25,125	0/0:17,0:17:50.99:0,51,471	1/1:21,0:21:44.20:280,44,0	1/1:25,1:26:53.31:319,53,0	1/1:15,0:15:39.81:275,40,0
chr10	40484365	.	TA	T	650.77	PASS	AB=0.874;AC=11;AF=0.196;AN=56;BaseQRankSum=-3.403;DP=589;FS=7.152;HRun=15;HaplotypeScore=105.9635;InbreedingCoeff=0.1991;MQ=73.39;MQ0=2;MQRankSum=1.182;QD=3.56;ReadPosRankSum=0.839;VQSLOD=1.0823;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,25:43:61.97:383,62,0	0/1:8,1:9:1.29:1,0,108	0/0:15,0:14:8.16:0,8,43	0/1:13,0:11:2.77:3,0,14	0/0:26,2:28:5.15:0,5,277	0/0:19,1:19:10.69:0,11,209	0/0:22,2:24:12.38:0,12,332	0/1:15,3:18:56.38:56,0,104	0/0:15,1:19:8.93:0,9,183	0/0:21,3:24:10.73:0,11,218	0/1:20,2:23:5.21:5,0,193	0/0:27,0:27:50.15:0,50,244	0/0:15,1:16:23.81:0,24,191	0/0:17,1:18:26.93:0,27,217	0/0:25,1:26:30.73:0,31,273	0/0:13,0:13:20.49:0,20,126	0/0:35,1:36:2.11:0,2,336	0/0:21,0:21:43.44:0,43,349	0/1:19,1:21:21.78:22,0,138	0/0:22,0:22:28.80:0,29,253	0/0:19,1:19:3.61:0,4,190	1/1:7,10:18:28.57:179,29,0	0/0:9,0:17:14.33:0,14,74	0/0:20,0:19:24.31:0,24,113	0/1:7,10:18:38.17:141,0,38	0/1:18,1:20:5.48:5,0,127	0/0:24,1:25:18.91:0,19,288	0/0:15,0:15:27.36:0,27,166
chr10	40484545	.	TA	T	8170.71	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=-8.082;DP=547;FS=0.000;HRun=10;HaplotypeScore=81.1906;InbreedingCoeff=0.9488;MQ=67.29;MQ0=1;MQRankSum=-1.872;QD=19.00;ReadPosRankSum=1.958;VQSLOD=5.4736;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,36:40:82.32:862,82,0	1/1:0,0:10:18.33:54,18,0	0/0:17,0:11:1.43:0,1,113	0/0:19,0:14:24.04:0,24,257	1/1:2,29:31:86.91:746,87,0	0/0:1,0:11:25.57:0,26,128	0/0:2,0:21:51.13:0,51,256	1/1:1,33:34:98.94:852,99,0	0/0:1,0:17:39.94:0,40,218	1/1:4,0:26:44.81:132,45,0	1/1:2,0:17:28.51:84,29,0	1/1:3,21:24:65.58:557,66,0	0/0:11,0:11:31.50:0,31,163	0/0:20,0:20:14.49:0,14,233	1/1:2,20:22:56.98:495,57,0	1/1:1,13:14:35.99:312,36,0	1/1:3,20:23:41.07:453,41,0	1/1:1,0:18:30.56:90,31,0	1/1:2,16:18:47.97:413,48,0	1/1:4,18:23:52.91:434,53,0	1/1:3,16:19:17.81:383,18,0	1/1:2,20:22:56.98:495,57,0	1/1:1,14:16:41.79:351,42,0	1/1:3,12:15:32.99:286,33,0	1/1:2,10:12:26.99:234,27,0	1/1:3,16:19:44.98:391,45,0	1/1:2,19:21:47.99:417,48,0	1/1:1,5:6:15:130,15,0
chr10	40485060	.	C	CTT	2174.75	PASS	AB=0.976;AC=47;AF=0.839;AN=56;BaseQRankSum=-2.284;DP=552;FS=2.923;HRun=18;HaplotypeScore=101.6723;InbreedingCoeff=0.1090;MQ=60.33;MQ0=17;MQRankSum=-2.433;QD=4.40;ReadPosRankSum=-0.184;VQSLOD=-0.5368;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:18,1:29:1.63:80,2,0	0/1:10,1:11:15.39:33,0,15	0/0:35,0:11:4.55:0,5,17	0/1:30,0:16:11.59:23,0,12	1/1:22,1:25:6.66:158,7,0	1/1:15,0:15:8.65:56,9,0	1/1:21,0:20:15.01:136,15,0	1/1:33,1:34:10.09:201,10,0	1/1:19,0:18:6.40:47,6,0	0/0:22,0:22:0.74:0,1,49	0/1:14,0:15:13.49:24,0,13	1/1:12,0:12:9.57:33,10,0	1/1:7,0:7:2.60:12,3,0	1/1:10,0:10:7.31:27,7,0	1/1:17,0:17:11.01:123,11,0	1/1:13,0:14:14.01:114,14,0	1/1:14,0:29:17.39:157,17,0	0/1:19,0:20:17.05:17,0,21	1/1:17,1:17:16.75:135,17,0	1/1:6,9:16:17.12:131,17,0	1/1:10,0:9:6.02:69,6,0	0/1:21,0:19:1.22:92,0,1	1/1:10,0:10:10.45:39,10,0	1/1:8,0:7:0.47:2,0,0	1/1:7,0:13:7.82:61,8,0	1/1:14,13:27:41.47:356,41,0	1/1:17,0:30:11.54:67,12,0	1/1:10,0:23:5.92:113,6,0
chr10	40485062	.	T	TTC	625.57	PASS	AB=1.000;AC=10;AF=0.185;AN=54;BaseQRankSum=4.024;DP=515;FS=7.343;HRun=0;HaplotypeScore=77.6882;InbreedingCoeff=0.5900;MQ=60.53;MQ0=21;MQRankSum=1.973;QD=4.89;ReadPosRankSum=5.507;VQSLOD=1.0916;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:37.08:0,37,287	1/1:13,0:12:5.61:105,6,0	0/0:35,0:10:10.45:0,10,152	0/1:31,0:16:3.83:4,0,134	0/0:24,0:24:31.27:0,31,299	0/0:16,0:15:34.50:0,34,264	0/0:20,0:19:13.05:0,13,140	0/0:35,0:34:45.98:0,46,499	0/0:19,0:18:31.23:0,31,257	1/1:21,0:21:48.86:359,49,0	1/1:16,0:16:37.33:230,37,0	0/0:2,0:2:2.88:0,3,15	./.	0/0:2,0:2:0.47:0,0,1	0/0:17,0:17:30.93:0,31,287	0/0:14,0:14:26.78:0,27,246	0/0:30,0:28:2.86:0,3,147	1/1:9,12:21:7.97:69,8,0	0/0:20,0:18:21.42:0,21,282	0/0:17,0:16:12.77:0,13,137	0/0:10,0:9:2.32:0,2,71	0/0:21,0:18:28.62:0,29,266	0/0:1,0:1:2.60:0,3,10	0/0:5,0:2:2.13:0,2,5	0/0:13,0:13:10.90:0,11,120	0/1:26,0:25:0.77:1,0,192	0/0:30,0:30:42.29:0,42,310	0/0:26,0:24:18.33:0,18,178
chr10	40485063	.	T	TC	924.84	PASS	AB=0.619;AC=7;AF=0.130;AN=54;BaseQRankSum=-2.687;DP=511;FS=12.058;HRun=0;HaplotypeScore=67.1915;InbreedingCoeff=0.6971;MQ=60.34;MQ0=22;MQRankSum=5.099;QD=12.67;ReadPosRankSum=3.903;VQSLOD=3.4722;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:48.16:0,48,326	0/1:5,8:12:3.13:155,0,3	0/0:35,0:10:10.54:0,11,142	0/0:30,0:16:4.89:0,5,131	0/0:24,0:24:62.58:0,63,432	0/0:16,0:15:41.63:0,42,302	0/0:19,0:18:34.52:0,35,220	0/0:34,0:33:87.40:0,87,680	0/0:19,0:18:39.38:0,39,280	1/1:3,18:22:58.90:494,59,0	1/1:4,11:15:38.29:329,38,0	0/0:1,0:1:2.88:0,3,15	./.	0/0:1,0:1:0.47:0,0,1	0/0:17,0:17:46.83:0,47,361	0/0:14,0:14:40.83:0,41,300	0/0:29,0:27:34.13:0,34,234	1/1:21,2:23:8.48:86,8,0	0/0:21,0:18:48.56:0,49,360	0/0:17,0:16:30.29:0,30,173	0/0:10,0:9:17.71:0,18,118	0/0:21,0:18:47.59:0,48,330	0/0:1,0:1:2.60:0,3,10	0/0:5,0:2:2.13:0,2,5	0/0:12,0:12:23.11:0,23,153	0/0:26,0:25:60.92:0,61,409	0/0:30,0:30:46.82:0,47,344	0/0:26,0:24:36.60:0,37,249
chr10	40485489	.	G	GGGGTGTGTGT	1083.03	PASS	AB=0.872;AC=6;AF=0.107;AN=56;BaseQRankSum=4.178;DP=517;FS=19.719;HRun=0;HaplotypeScore=161.3612;InbreedingCoeff=0.0703;MQ=60.92;MQ0=7;MQRankSum=-2.720;QD=15.04;ReadPosRankSum=-0.280;VQSLOD=1.6170;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:33:71.69:0,72,1498	1/1:5,0:5:1.25:3,1,0	0/0:8,0:4:2.99:0,3,23	0/0:19,0:10:18.05:0,18,220	0/0:34,0:33:77.98:0,78,1491	0/1:6,5:12:14.95:148,0,15	0/1:17,0:17:86.88:184,0,87	0/0:31,0:31:68.83:0,69,913	0/1:10,0:12:22.84:837,0,23	0/1:25,0:25:22.44:22,0,223	0/0:14,0:13:9.40:0,9,116	0/0:20,0:20:51.05:0,51,916	0/0:19,0:19:32.92:0,33,486	0/0:13,0:13:30.04:0,30,494	0/0:23,0:23:54.05:0,54,855	0/0:16,0:16:39.05:0,39,905	0/0:36,0:36:71.95:0,72,1287	0/0:13,0:13:12.61:0,13,168	0/0:12,0:12:36.03:0,36,485	0/0:22,0:22:48.04:0,48,845	0/0:24,0:24:51.56:0,52,977	0/0:13,0:13:30.06:0,30,661	0/0:15,0:15:30.04:0,30,528	0/0:12,0:12:24.07:0,24,487	0/0:19,0:19:38.09:0,38,835	0/0:13,0:13:27.01:0,27,409	0/0:19,0:19:53.94:0,54,1084	0/0:16,0:15:45.04:0,45,950
chr10	40485491	.	GGT	G	825.19	PASS	AB=0.901;AC=19;AF=0.352;AN=54;BaseQRankSum=5.951;DP=556;FS=1.829;HRun=0;HaplotypeScore=84.6436;InbreedingCoeff=0.2192;MQ=58.91;MQ0=9;MQRankSum=1.711;QD=3.20;ReadPosRankSum=1.240;VQSLOD=2.1843;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,3:34:25.99:0,26,726	0/0:1,0:5:3:0,3,26	./.	0/0:19,0:9:6.02:0,6,89	0/0:34,0:33:30.76:0,31,730	0/0:19,0:20:2.84:0,3,27	0/0:20,0:20:10.05:0,10,118	0/1:35,0:35:24.80:25,0,374	0/0:5,0:16:21:0,21,183	0/0:19,0:26:44.87:0,45,370	0/0:10,0:16:11.02:0,11,82	1/1:6,0:20:31.25:154,31,0	1/1:10,11:21:15.04:171,15,0	1/1:4,9:13:18.05:204,18,0	0/1:21,3:24:35.04:35,0,375	0/1:14,2:16:3.97:4,0,384	0/0:34,1:35:4.49:0,4,469	0/0:7,0:15:15.34:0,15,121	0/1:12,2:14:53.57:56,0,54	0/1:21,1:22:9.99:10,0,298	0/0:25,0:26:36.93:0,37,588	0/1:14,2:16:42.84:43,0,336	1/1:4,0:15:17.04:84,17,0	1/1:3,0:13:19.89:98,20,0	0/0:19,0:19:29.96:0,30,408	0/1:9,3:13:80.18:80,0,85	0/1:17,2:19:35.01:35,0,381	0/1:16,1:16:3.97:4,0,385
chr10	40485672	.	CTGTT	C	3734.20	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=9.991;DP=701;FS=4.989;HRun=0;HaplotypeScore=118.6044;InbreedingCoeff=0.9802;MQ=62.32;MQ0=1;MQRankSum=-0.279;QD=30.61;ReadPosRankSum=3.057;VQSLOD=3.4902;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,117,2707	0/0:11,0:11:24.08:0,24,585	0/0:27,0:21:8.65:0,9,601	0/0:23,0:20:33.11:0,33,697	0/0:28,0:28:63.22:0,63,1481	0/0:5,0:22:39.13:0,39,669	0/0:10,0:25:54.18:0,54,980	0/0:34,0:32:66.20:0,66,1428	0/0:2,0:14:33.11:0,33,579	0/0:29,0:29:63.22:0,63,1494	0/0:23,0:23:51.18:0,51,1243	1/1:9,22:31:60.20:983,60,0	1/1:5,21:26:54.18:884,54,0	1/1:4,8:12:21.07:344,21,0	0/0:24,0:24:60.21:0,60,1446	0/0:18,0:18:39.13:0,39,945	0/0:30,0:30:69.24:0,69,1596	0/0:24,0:24:51.17:0,51,1207	0/0:24,0:23:33.08:0,33,694	0/0:23,0:23:54.17:0,54,1267	0/0:36,0:36:69.24:0,69,1648	0/0:21,0:21:39.13:0,39,926	1/1:3,20:23:48.16:786,48,0	1/1:12,18:30:45.15:737,45,0	0/0:24,0:24:57.20:0,57,1345	0/0:24,0:24:57.20:0,57,1385	0/0:31,0:31:57.20:0,57,1348	0/0:11,0:11:15.03:0,15,305
chr10	40487649	.	ACC	A	2795.61	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.700;DP=654;FS=12.468;HRun=5;HaplotypeScore=80.1139;InbreedingCoeff=0.9968;MQ=72.94;MQ0=1;MQRankSum=-3.153;QD=33.68;ReadPosRankSum=0.713;VQSLOD=2.2811;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,102,1733	0/0:11,0:11:33.11:0,33,587	0/0:20,0:20:57.17:0,57,1001	0/0:12,1:13:33.11:0,33,556	0/0:20,0:20:60.21:0,60,1077	0/0:21,0:21:63.22:0,63,1150	0/0:34,0:34:99:0,99,1750	0/0:18,0:18:45.15:0,45,806	0/0:30,0:30:87.28:0,87,1537	0/0:34,0:34:96.28:0,96,1661	0/0:23,0:23:66.23:0,66,1187	1/1:3,22:24:63.21:881,63,0	0/0:21,0:21:60.19:0,60,1037	0/0:25,0:25:72.24:0,72,1297	0/0:22,0:22:66.23:0,66,1203	0/0:24,0:24:72.25:0,72,1310	0/0:31,0:31:93.26:0,93,1638	0/0:13,0:13:36.11:0,36,617	0/0:17,0:17:51.17:0,51,918	0/0:20,0:20:57.15:0,57,982	0/0:28,0:28:84.27:0,84,1506	0/0:12,0:12:33.11:0,33,605	1/1:0,30:30:75.72:1050,76,0	1/1:1,27:28:72.24:1007,72,0	0/0:17,0:17:51.17:0,51,926	0/0:38,0:38:99:0,108,1918	0/0:38,0:38:99:0,111,1992	0/0:6,0:6:18.06:0,18,330
chr10	40487995	.	G	GT	7885.21	PASS	AB=0.692;AC=31;AF=0.554;AN=56;BaseQRankSum=-7.475;DP=583;FS=1.126;HRun=10;HaplotypeScore=67.9613;InbreedingCoeff=0.8923;MQ=78.11;MQ0=1;MQRankSum=-1.911;QD=22.46;ReadPosRankSum=0.008;VQSLOD=5.6048;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,20:24:43.77:591,44,0	0/0:13,0:13:29.95:0,30,246	0/0:21,0:21:38.98:0,39,300	0/0:25,0:22:1.20:0,1,145	1/1:4,19:23:20.44:411,20,0	0/0:18,0:20:52.01:0,52,406	0/0:16,0:16:41.90:0,42,339	1/1:12,24:38:71.82:723,72,0	0/0:21,1:22:24.85:0,25,403	0/0:28,1:30:41.95:0,42,539	0/0:20,2:22:21.89:0,22,384	0/0:17,0:17:41.91:0,42,339	1/1:3,23:26:51.13:544,51,0	1/1:2,14:16:39.10:416,39,0	1/1:3,25:28:38.51:615,39,0	1/1:4,13:17:11.45:327,11,0	1/1:2,26:28:75.19:800,75,0	0/0:15,0:15:29.94:0,30,246	1/1:5,18:24:53.86:523,54,0	1/1:3,15:18:19.58:422,20,0	1/1:4,9:13:27.07:288,27,0	1/1:0,13:13:36.09:384,36,0	0/0:18,0:19:49.94:0,50,394	0/0:12,0:12:32.86:0,33,259	1/1:3,15:19:23.44:443,23,0	1/1:7,21:29:41.35:611,41,0	1/1:1,25:26:66.17:704,66,0	0/1:5,4:9:12.61:84,0,13
chr10	40488437	.	A	AT	4401.15	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=-5.390;DP=653;FS=0.355;HRun=10;HaplotypeScore=98.3449;InbreedingCoeff=0.8802;MQ=66.16;MQ0=2;MQRankSum=-0.661;QD=19.56;ReadPosRankSum=0.431;VQSLOD=4.9961;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:12,38:49:71.36:937,71,0	0/0:16,0:16:47.94:0,48,394	0/1:11,0:7:15.89:30,0,16	0/0:12,0:13:2.84:0,3,111	0/0:24,1:25:33.91:0,34,481	0/0:4,0:19:33.55:0,34,113	0/0:7,0:22:26.46:0,26,76	0/0:39,0:39:43.88:0,44,556	0/0:5,0:19:24.33:0,24,70	0/0:18,0:18:41.94:0,42,345	0/0:19,0:19:53.89:0,54,437	1/1:7,11:18:25.42:259,25,0	1/1:2,12:13:24.02:243,24,0	1/1:4,19:23:45.11:480,45,0	0/0:14,0:14:23.96:0,24,197	0/0:22,0:22:47.92:0,48,394	0/0:38,0:37:98.83:0,99,808	0/0:35,1:36:51.85:0,52,626	0/0:25,0:26:49.09:0,49,430	0/0:20,0:20:47.92:0,48,394	0/0:17,0:18:40.96:0,41,326	1/1:2,24:26:66.16:702,66,0	1/1:4,23:28:47.99:493,48,0	1/1:2,34:36:81.20:863,81,0	1/1:5,14:19:39.90:393,40,0	0/0:28,0:28:68.88:0,69,562	0/0:22,0:21:65.92:0,66,542	0/0:14,0:14:9.23:0,9,158
chr10	40489190	.	TC	T	3020.96	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=10.463;DP=785;FS=12.731;HRun=1;HaplotypeScore=71.7486;InbreedingCoeff=0.9982;MQ=87.30;MQ0=0;MQRankSum=-2.407;QD=36.40;ReadPosRankSum=1.386;VQSLOD=2.9121;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:59,0:59:99:0,178,2792	0/0:9,0:9:27.08:0,27,405	0/0:32,0:32:96.16:0,96,1365	0/0:22,0:22:65.94:0,66,974	0/0:20,0:20:57.19:0,57,911	1/1:0,21:21:57.14:774,57,0	1/1:0,29:29:78.26:1090,78,0	0/0:29,0:29:87.27:0,87,1330	1/1:0,33:33:93.31:1300,93,0	0/0:20,0:20:60.19:0,60,917	0/0:28,0:28:78.25:0,78,1221	0/0:31,0:31:93.28:0,93,1454	0/0:26,0:26:78.27:0,78,1243	0/0:29,0:29:87.28:0,87,1366	0/0:43,0:43:99:0,129,2059	0/0:33,0:33:99:0,99,1557	0/0:25,0:25:75.24:0,75,1174	0/0:28,0:28:84.20:0,84,1272	0/0:27,0:27:81.19:0,81,1154	0/0:21,0:21:56.87:0,57,910	0/0:42,0:42:99:0,120,1887	0/0:24,0:24:72.11:0,72,1047	0/0:20,0:20:57.19:0,57,910	0/0:39,0:39:99:0,117,1840	0/0:25,0:25:75.25:0,75,1186	0/0:26,0:26:75.26:0,75,1192	0/0:37,0:37:99:0,105,1612	0/0:7,0:7:21.07:0,21,329
chr10	40489735	.	GA	G	5758.69	PASS	AB=0.736;AC=36;AF=0.643;AN=56;BaseQRankSum=1.292;DP=570;FS=0.855;HRun=12;HaplotypeScore=72.7157;InbreedingCoeff=0.4498;MQ=68.32;MQ0=2;MQRankSum=1.658;QD=12.55;ReadPosRankSum=5.328;VQSLOD=4.9431;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,32:42:88.38:681,88,0	1/1:1,2:3:5.35:45,5,0	0/1:38,1:22:8.89:9,0,115	0/1:31,0:20:19.08:19,0,80	1/1:4,21:25:29.94:357,30,0	0/0:16,0:17:46.69:0,47,433	0/0:18,1:19:24.65:0,25,393	1/1:7,18:25:30.71:351,31,0	0/0:15,0:15:24:0,24,218	1/1:5,16:21:47.75:365,48,0	1/1:5,14:19:28.88:269,29,0	0/0:18,0:19:35.80:0,36,328	1/1:3,9:12:26.89:209,27,0	0/1:3,9:12:3.54:159,0,4	1/1:7,22:29:39.57:488,40,0	1/1:2,13:15:29.88:232,30,0	1/1:7,14:20:49.05:374,49,0	1/1:3,13:16:32.86:255,33,0	1/1:3,19:23:55.77:416,56,0	0/1:6,11:17:4.02:155,0,4	1/1:3,10:13:16.06:235,16,0	0/1:5,10:15:9.50:116,0,10	0/0:21,1:22:36.42:0,36,510	0/0:18,0:19:41.61:0,42,370	0/1:5,13:18:20.03:196,0,20	1/1:7,19:28:47.31:432,47,0	0/1:8,20:28:0.24:359,0,0	0/1:6,0:6:18.64:37,0,19
chr10	40490426	.	T	TAAA	1158.97	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-2.107;DP=557;FS=0.744;HRun=11;HaplotypeScore=85.1819;InbreedingCoeff=0.9439;MQ=70.16;MQ0=1;MQRankSum=0.305;QD=19.98;ReadPosRankSum=-0.510;VQSLOD=2.0667;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:33:71.87:0,72,789	0/0:10,0:12:26.86:0,27,268	0/0:26,0:21:10.64:0,11,275	0/0:10,0:9:11.87:0,12,122	0/0:30,0:30:75.14:0,75,876	1/1:6,14:21:21.07:396,21,0	1/1:6,4:13:21.03:297,21,0	0/0:23,0:24:47.96:0,48,539	1/1:5,16:23:36.08:608,36,0	0/0:30,0:31:72.06:0,72,815	0/0:21,0:21:38.94:0,39,445	0/0:12,0:12:26.98:0,27,297	0/0:15,0:15:42.10:0,42,491	0/0:11,0:11:27.04:0,27,315	0/0:23,0:23:60.12:0,60,689	0/0:10,0:11:29.99:0,30,333	0/0:24,0:25:60.08:0,60,684	0/0:18,0:18:45.12:0,45,525	0/0:12,0:14:36.01:0,36,403	0/0:20,0:21:54:0,54,597	0/0:18,0:18:42.04:0,42,491	0/0:20,0:20:45.03:0,45,510	0/0:18,0:21:53.89:0,54,569	0/0:26,0:29:75.01:0,75,827	0/0:16,0:16:36.06:0,36,421	0/0:33,0:33:75.05:0,75,874	0/0:19,0:19:51.07:0,51,596	0/0:3,0:4:7.58:0,8,103
chr10	40491071	.	TCACACACACACACA	T	255.93	PASS	AC=8;AF=0.182;AN=44;BaseQRankSum=2.538;DP=437;FS=4.812;HRun=0;HaplotypeScore=143.2970;InbreedingCoeff=0.5603;MQ=59.82;MQ0=34;MQRankSum=-2.178;QD=4.92;ReadPosRankSum=-0.294;VQSLOD=2.5427;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:19:12.04:0,12,439	0/0:7,0:6:6.02:0,6,381	./.	./.	0/0:17,0:16:30.10:0,30,1630	1/1:17,0:17:6.02:134,6,0	./.	0/0:19,0:19:3.48:0,3,47	./.	0/0:14,0:14:24.96:0,25,1052	0/0:5,0:5:6.02:0,6,278	1/1:7,0:10:3:98,3,0	0/0:15,0:11:6.02:0,6,83	1/1:9,0:10:2.99:23,3,0	0/0:7,0:7:2.99:0,3,23	0/0:12,0:12:18.06:0,18,937	0/0:26,0:25:42.14:0,42,2138	0/0:15,0:16:27.09:0,27,1378	0/0:9,0:8:0.89:0,1,2	0/0:13,0:13:12.04:0,12,359	0/0:19,0:15:30.09:0,30,869	0/0:7,0:9:3.01:0,3,167	1/1:8,6:13:3.01:115,3,0	./.	0/0:17,0:17:27.09:0,27,1072	0/0:27,0:27:50.93:0,51,1506	0/0:17,0:15:30.10:0,30,998	./.
chr10	40491132	.	ATATATC	A	1308.98	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=7.149;DP=397;FS=31.179;HRun=0;HaplotypeScore=89.5221;InbreedingCoeff=0.9552;MQ=67.97;MQ0=16;MQRankSum=-7.328;QD=40.91;ReadPosRankSum=-0.798;VQSLOD=1.4856;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:20:51.18:0,51,1868	0/0:12,0:9:27.05:0,27,834	0/0:24,0:18:51.18:0,51,1824	0/0:31,0:23:66.21:0,66,2240	0/0:13,0:12:36.12:0,36,1179	1/1:1,11:12:30.10:590,30,0	1/1:0,17:17:30.10:635,30,0	0/0:19,0:18:48.16:0,48,1758	1/1:0,3:3:9.03:221,9,0	0/0:9,0:9:27.09:0,27,962	0/0:8,0:6:18.06:0,18,655	0/0:12,0:12:27.09:0,27,879	0/0:12,0:11:30.10:0,30,1095	0/0:9,0:9:18.06:0,18,613	0/0:6,0:6:18.06:0,18,660	0/0:16,0:15:42.14:0,42,1501	0/0:22,0:20:57.20:0,57,2005	0/0:18,0:18:51.18:0,51,1754	0/0:12,0:10:30.10:0,30,1097	0/0:9,0:9:21.07:0,21,770	0/0:19,0:18:42.14:0,42,1482	0/0:13,0:12:27.09:0,27,989	0/0:16,0:15:27.09:0,27,937	0/0:16,0:15:26.95:0,27,987	0/0:12,0:12:36.12:0,36,1228	0/0:15,0:15:42.14:0,42,1538	0/0:16,0:15:39.13:0,39,1321	0/0:5,0:4:12.04:0,12,439
chr10	40492149	.	GCACA	G	5152.27	PASS	AB=0.629;AC=39;AF=0.696;AN=56;BaseQRankSum=-1.672;DP=721;FS=1.109;HRun=0;HaplotypeScore=184.4116;InbreedingCoeff=0.5777;MQ=52.82;MQ0=21;MQRankSum=-4.189;QD=10.67;ReadPosRankSum=0.614;VQSLOD=4.4928;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:34:6.48:58,6,0	1/1:4,0:10:6.01:56,6,0	0/0:55,0:8:8.70:0,9,125	0/0:73,0:11:3.01:0,3,50	0/0:10,0:22:29.85:0,30,131	0/0:7,0:15:13.32:0,13,77	0/0:18,0:31:25.35:0,25,284	1/1:12,8:19:0.77:307,1,0	0/0:8,0:21:24.07:0,24,392	1/1:9,0:28:39.04:361,39,0	1/1:5,0:22:6.79:40,7,0	1/1:10,0:37:43.25:395,43,0	1/1:5,0:23:30.03:279,30,0	1/1:9,0:25:15.04:123,15,0	0/0:7,0:20:21.80:0,22,98	0/1:8,1:19:17.35:17,0,116	0/1:8,3:35:53.39:53,0,118	1/1:9,0:16:8.04:61,8,0	1/1:11,7:18:21.03:287,21,0	1/1:9,11:20:24.06:315,24,0	1/1:29,22:51:76.69:1089,77,0	1/1:9,0:19:4.58:96,5,0	1/1:5,0:29:13.53:116,14,0	0/1:10,0:18:16.76:51,0,17	1/1:4,0:12:9.01:85,9,0	1/1:7,11:19:39.52:522,40,0	1/1:1,16:18:45.15:695,45,0	1/1:2,6:8:9.03:145,9,0
chr10	40493230	.	CCT	C	712.45	PASS	AB=0.972;AC=8;AF=0.143;AN=56;BaseQRankSum=3.695;DP=449;FS=8.109;HRun=0;HaplotypeScore=60.2680;InbreedingCoeff=0.7056;MQ=71.29;MQ0=2;MQRankSum=0.264;QD=8.28;ReadPosRankSum=0.817;VQSLOD=2.0086;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:42.14:0,42,698	0/0:8,0:8:21.06:0,21,321	0/1:32,2:23:22.01:22,0,540	0/0:37,0:16:7.48:0,7,247	0/0:19,0:19:45.14:0,45,713	0/0:12,0:12:36.09:0,36,541	0/0:15,0:15:39.12:0,39,615	0/0:23,0:22:51.15:0,51,780	0/0:14,0:14:30.09:0,30,467	0/0:13,0:13:27.09:0,27,449	0/0:11,0:11:30.10:0,30,481	1/1:5,14:19:36.12:454,36,0	0/0:18,0:18:45.14:0,45,707	0/0:11,0:11:33.11:0,33,535	0/0:14,0:14:30.10:0,30,496	0/0:15,0:15:39.13:0,39,638	0/0:17,0:17:45.15:0,45,736	0/0:8,0:8:24.01:0,24,361	0/0:18,0:18:33.11:0,33,541	0/0:10,0:10:27.09:0,27,433	0/0:23,0:23:60.19:0,60,959	0/1:14,0:14:4.70:5,0,456	1/1:2,5:7:15.05:189,15,0	1/1:5,7:12:15.05:189,15,0	0/0:11,0:11:21.07:0,21,343	0/0:14,0:14:27.09:0,27,447	0/0:22,0:22:35:0,35,694	0/0:9,0:9:21.07:0,21,331
chr10	40493310	.	T	TC	501.20	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=-2.771;DP=304;FS=0.000;HRun=7;HaplotypeScore=34.5919;InbreedingCoeff=0.7991;MQ=76.04;MQ0=3;MQRankSum=-0.744;QD=15.66;ReadPosRankSum=-1.612;VQSLOD=2.2435;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:54.09:0,54,521	0/0:4,0:4:6:0,6,58	0/0:19,0:12:7.99:0,8,119	0/0:51,0:26:36.01:0,36,350	0/0:12,0:12:27.04:0,27,260	1/1:0,7:7:12.04:145,12,0	1/1:1,13:14:27.08:326,27,0	0/0:8,0:7:15.01:0,15,141	1/1:2,7:9:15.01:166,15,0	0/0:14,0:14:36.04:0,36,336	0/0:7,0:7:18.02:0,18,173	0/0:16,0:16:33.04:0,33,318	0/0:11,0:11:24.03:0,24,232	0/0:8,0:8:21.03:0,21,203	0/0:10,0:10:27.04:0,27,260	0/0:5,0:5:12.01:0,12,110	0/0:5,0:5:12.01:0,12,116	0/1:2,0:2:0:0,0,0	0/0:9,0:9:24.03:0,24,232	0/0:5,0:5:12.02:0,12,116	0/0:15,0:15:39.06:0,39,376	0/0:4,0:4:9.01:0,9,87	0/0:5,0:5:12.01:0,12,110	0/0:5,0:5:9.01:0,9,87	0/0:9,0:9:24.04:0,24,231	0/0:12,0:12:36.05:0,36,344	0/0:12,0:12:33.05:0,33,318	0/0:5,0:5:12.02:0,12,116
chr10	40493772	.	GCA	G	397.30	PASS	AB=0.836;AC=13;AF=0.271;AN=48;BaseQRankSum=1.789;DP=476;FS=2.088;HRun=0;HaplotypeScore=70.2619;InbreedingCoeff=0.1324;MQ=73.67;MQ0=19;MQRankSum=-0.017;QD=2.45;ReadPosRankSum=1.914;VQSLOD=1.7523;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:30:3.31:14,3,0	0/1:4,1:5:25.43:25,0,38	./.	./.	0/0:14,0:14:3:0,3,27	1/1:14,2:14:3.01:32,3,0	0/1:17,3:19:31.55:83,0,32	./.	0/0:21,0:20:12.30:0,12,167	0/0:11,0:10:9.03:0,9,115	0/0:15,0:13:9.03:0,9,126	0/1:10,5:14:25.52:140,0,26	0/0:8,0:7:6.48:0,6,62	0/0:12,0:19:6:0,6,62	0/0:15,0:15:17.99:0,18,154	0/0:13,0:11:3:0,3,27	0/0:17,0:29:8.80:0,9,72	0/1:23,1:24:13.50:13,0,189	0/0:15,0:15:6.01:0,6,64	0/0:11,0:10:6.02:0,6,74	0/0:26,0:25:21.04:0,21,233	./.	1/1:7,1:8:5.85:45,6,0	0/1:21,7:30:18.57:163,0,19	1/1:9,0:13:4.40:18,4,0	0/0:15,0:14:5.98:0,6,58	0/0:3,0:9:2.91:0,3,26	0/0:1,0:1:3.01:0,3,38
chr10	40494238	.	GAA	G	7041.54	PASS	AB=0.786;AC=38;AF=0.679;AN=56;BaseQRankSum=-10.980;DP=566;FS=0.822;HRun=13;HaplotypeScore=91.1697;InbreedingCoeff=0.7795;MQ=68.70;MQ0=1;MQRankSum=4.440;QD=16.49;ReadPosRankSum=7.458;VQSLOD=3.8160;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:22:41.44:0,41,203	1/1:3,7:11:8.93:137,9,0	0/1:18,0:15:11:11,0,112	0/0:16,0:14:17.23:0,17,149	1/1:2,28:30:66.83:715,67,0	0/0:20,0:23:57.02:0,57,544	0/0:15,0:16:26.57:0,27,247	1/1:15,14:32:8.23:337,8,0	0/0:10,0:9:15.70:0,16,126	1/1:4,12:21:14.09:309,14,0	1/1:2,10:12:22.79:207,23,0	1/1:4,16:21:22.20:376,22,0	0/0:16,0:16:37.14:0,37,363	0/0:16,0:16:36.85:0,37,365	1/1:5,19:24:4.21:363,4,0	1/1:2,18:20:48.04:465,48,0	1/1:7,27:35:73.21:707,73,0	1/1:0,24:26:41.94:507,42,0	1/1:7,12:19:27.82:313,28,0	1/1:5,16:24:36.04:427,36,0	1/1:7,10:20:32.22:268,32,0	0/1:5,1:13:13.31:13,0,38	1/1:6,14:22:37.50:324,38,0	1/1:3,16:21:40.17:431,40,0	0/0:5,1:18:12.69:0,13,146	1/1:3,18:24:49.81:477,50,0	1/1:6,21:28:41.63:595,42,0	1/1:1,2:3:5.98:58,6,0
chr10	40494304	.	TG	T	1181.71	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=5.264;DP=553;FS=10.280;HRun=5;HaplotypeScore=69.8345;InbreedingCoeff=0.9989;MQ=81.89;MQ0=1;MQRankSum=-0.216;QD=25.14;ReadPosRankSum=2.288;VQSLOD=2.6107;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:81.27:0,81,1106	0/0:10,0:10:30.10:0,30,403	0/0:15,0:15:42.13:0,42,542	0/0:18,0:17:38.81:0,39,523	0/0:22,0:22:66.20:0,66,885	1/1:3,18:21:54.15:612,54,0	1/1:1,13:14:30.08:338,30,0	0/0:44,0:44:99:0,120,1632	1/1:0,12:12:33.09:374,33,0	0/0:22,0:22:60.20:0,60,820	0/0:11,0:11:33.11:0,33,448	0/0:19,0:18:45.15:0,45,616	0/0:18,0:18:54.17:0,54,723	0/0:14,0:14:39.13:0,39,534	0/0:20,0:20:48.15:0,48,642	0/0:15,0:15:39.13:0,39,534	0/0:34,0:34:87.28:0,87,1175	0/0:15,0:15:39.13:0,39,534	0/0:21,0:21:60.15:0,60,785	0/0:29,0:29:78.23:0,78,1035	0/0:22,0:22:60.20:0,60,821	0/0:14,0:14:42.14:0,42,573	0/0:17,0:17:42.14:0,42,574	0/0:15,0:15:45.11:0,45,589	0/0:16,0:16:45.15:0,45,613	0/0:26,0:26:78.24:0,78,1039	0/0:26,0:26:72.17:0,72,931	0/0:9,0:9:27.08:0,27,351
chr10	40495060	.	C	CTTT	4862.45	PASS	AB=0.897;AC=18;AF=0.321;AN=56;BaseQRankSum=10.740;DP=612;FS=1.780;HRun=10;HaplotypeScore=109.0269;InbreedingCoeff=0.6913;MQ=68.85;MQ0=3;MQRankSum=-4.098;QD=20.87;ReadPosRankSum=-1.418;VQSLOD=3.0401;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,26:36:54.05:833,54,0	0/0:5,0:5:15.03:0,15,170	0/1:17,0:14:4.37:4,0,175	0/0:20,0:15:18.58:0,19,200	0/0:25,0:25:50.70:0,51,543	1/1:1,11:15:33.05:514,33,0	1/1:10,12:25:60.40:947,60,0	0/0:29,0:29:56.99:0,57,662	1/1:13,7:23:56.55:838,57,0	0/0:17,0:20:37.36:0,37,456	0/0:14,0:15:29.94:0,30,334	0/0:24,0:25:55.45:0,55,676	1/1:6,0:15:1.79:30,2,0	0/1:6,0:20:25.04:33,0,25	0/0:26,0:26:75.22:0,75,910	0/0:17,0:17:45.11:0,45,547	0/0:34,0:35:46.35:0,46,955	0/1:23,0:23:13.57:14,0,524	0/0:21,0:21:45.52:0,46,534	0/0:30,0:30:61.11:0,61,848	0/1:12,0:12:0.05:0,0,231	1/1:11,9:22:54.01:807,54,0	0/0:14,0:14:36.07:0,36,424	0/0:37,0:37:99:0,102,1210	1/1:10,11:21:52.53:843,53,0	0/0:29,0:29:78.20:0,78,939	0/0:21,0:21:45.03:0,45,547	0/0:9,0:9:27.08:0,27,328
chr10	40496017	.	T	TACAC	4630.90	PASS	AB=0.975;AC=45;AF=0.900;AN=50;BaseQRankSum=-2.502;DP=578;FS=0.000;HRun=0;HaplotypeScore=145.8809;InbreedingCoeff=-0.0709;MQ=56.02;MQ0=8;MQRankSum=-0.718;QD=9.34;ReadPosRankSum=0.965;VQSLOD=3.8573;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:34,0:34:5.42:109,5,0	0/1:7,0:7:0:0,0,0	./.	./.	1/1:18,0:18:3.01:64,3,0	0/1:19,0:19:23.80:122,0,24	0/1:18,0:17:7.70:61,0,8	1/1:25,0:25:17.31:248,17,0	0/1:20,0:19:24.64:25,0,71	1/1:12,0:15:6.14:30,6,0	1/1:6,0:10:5.74:37,6,0	1/1:33,0:33:18.06:306,18,0	1/1:10,0:10:18.03:262,18,0	1/1:24,0:23:18.06:334,18,0	1/1:8,8:17:20.54:359,21,0	1/1:12,11:25:27.09:636,27,0	1/1:12,16:36:23.55:449,24,0	0/1:17,0:21:11.38:248,0,11	1/1:14,0:14:6.02:102,6,0	1/1:15,0:15:9.03:179,9,0	1/1:24,0:21:11.75:268,12,0	1/1:12,5:17:2.90:71,3,0	1/1:13,0:13:3.01:57,3,0	1/1:29,0:29:5.38:118,5,0	./.	1/1:20,0:23:21.01:304,21,0	1/1:18,0:20:12.04:225,12,0	1/1:4,0:4:2.92:17,3,0
chr10	40496043	.	C	CACACAG	1779.83	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=5.347;DP=631;FS=25.329;HRun=0;HaplotypeScore=142.3068;InbreedingCoeff=-0.1677;MQ=52.96;MQ0=17;MQRankSum=0.315;QD=4.41;ReadPosRankSum=7.267;VQSLOD=0.6743;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:32,0:32:54.98:55,0,162	0/0:4,0:4:5.99:0,6,50	0/0:31,0:13:23.47:0,23,276	0/0:44,0:16:26.98:0,27,294	0/1:23,0:23:14.79:15,0,166	0/1:20,0:20:6:6,0,328	0/0:22,0:21:20.47:0,20,332	0/0:32,0:32:78.85:0,79,583	0/0:23,0:22:53.30:0,53,568	0/0:16,0:16:38.78:0,39,284	0/0:16,0:16:30.32:0,30,266	0/1:31,0:31:20.01:20,0,149	1/1:2,17:19:16.61:524,17,0	1/1:4,14:21:18.06:442,18,0	0/1:22,0:20:99:139,0,148	0/1:24,0:24:80:186,0,80	0/1:39,0:39:94.29:94,0,218	0/0:24,0:24:33.57:0,34,350	0/1:18,0:17:1.82:2,0,170	0/1:20,0:19:99:104,0,120	0/1:26,0:23:99:139,0,139	0/1:16,0:15:10.34:10,0,77	0/1:12,0:12:15.08:15,0,102	0/1:32,0:32:78.29:78,0,176	0/0:15,0:14:17.97:0,18,147	0/1:25,0:24:89.37:89,0,280	0/1:20,0:19:24.52:25,0,203	1/1:2,0:2:0.47:1,0,0
chr10	40496370	.	CTAA	C	381.93	PASS	AB=0.873;AC=6;AF=0.107;AN=56;BaseQRankSum=3.755;DP=561;FS=14.247;HRun=0;HaplotypeScore=160.0071;InbreedingCoeff=-0.1357;MQ=64.03;MQ0=4;MQRankSum=-4.662;QD=3.26;ReadPosRankSum=-2.850;VQSLOD=1.3524;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:26:12.18:12,0,137	0/0:7,0:7:19.96:0,20,257	0/0:30,0:24:49.84:0,50,1209	0/0:24,0:18:51.17:0,51,1095	0/1:12,0:11:6.89:7,0,48	0/1:11,7:18:99:143,0,109	0/1:19,3:23:44.94:45,0,176	0/0:28,0:27:49.08:0,49,342	0/1:12,12:24:68.83:254,0,69	0/0:25,0:25:69.84:0,70,1265	0/0:9,0:9:26.88:0,27,377	0/0:32,0:32:57.78:0,58,452	0/0:14,0:14:26.29:0,26,186	0/0:17,0:17:14.91:0,15,206	0/0:35,0:34:74.78:0,75,463	0/0:28,0:28:43.98:0,44,437	0/0:16,0:16:40.90:0,41,272	0/0:20,0:20:44.48:0,44,624	0/0:9,0:9:4.90:0,5,138	0/0:8,0:8:17.74:0,18,127	0/0:29,0:29:1.77:0,2,215	0/0:16,0:15:25.51:0,26,147	0/0:18,0:18:7.97:0,8,114	0/0:29,0:29:30:0,30,269	0/1:14,0:13:39.65:40,0,111	0/0:29,0:29:47.50:0,47,518	0/0:15,0:15:20.92:0,21,150	0/0:4,0:5:11.76:0,12,102
chr10	40496372	.	AACACAC	A	1752.95	PASS	AB=1.000;AC=13;AF=0.241;AN=54;BaseQRankSum=1.868;DP=672;FS=0.000;HRun=0;HaplotypeScore=209.7334;InbreedingCoeff=0.6326;MQ=59.53;MQ0=7;MQRankSum=-4.704;QD=10.89;ReadPosRankSum=1.633;VQSLOD=2.6747;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:4.99:0,5,84	1/1:3,2:7:14.99:188,15,0	0/0:30,0:23:0:0,0,0	./.	0/0:12,0:24:15.21:0,15,180	0/1:18,0:18:49.33:287,0,49	0/1:24,0:24:46.42:212,0,46	0/0:33,0:32:21.07:0,21,374	1/1:23,0:23:44.93:555,45,0	1/1:21,5:24:15.05:297,15,0	1/1:4,5:9:12.04:154,12,0	0/0:38,0:41:36.57:0,37,633	0/0:20,0:20:21.21:0,21,425	0/0:24,0:24:22.49:0,22,417	0/0:37,0:40:42.13:0,42,844	0/0:18,0:36:24.08:0,24,573	0/0:23,0:23:36.38:0,36,629	1/1:11,9:20:12.04:227,12,0	0/0:14,0:14:16.40:0,16,338	0/0:16,0:16:20.76:0,21,508	0/0:32,0:31:21.05:0,21,409	0/0:20,0:19:12.04:0,12,243	0/0:21,0:21:12.04:0,12,174	0/0:32,0:31:21.07:0,21,387	0/0:14,0:13:8.49:0,8,172	0/1:32,0:34:3.14:3,0,1093	0/0:8,0:27:15.48:0,15,292	0/0:8,0:8:15.05:0,15,300
chr10	40496375	.	ACACAC	A	935.23	PASS	AB=0.874;AC=6;AF=0.107;AN=56;BaseQRankSum=8.326;DP=682;FS=5.720;HRun=0;HaplotypeScore=200.6752;InbreedingCoeff=-0.1253;MQ=57.83;MQ0=14;MQRankSum=-4.917;QD=8.50;ReadPosRankSum=2.182;VQSLOD=2.4776;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:26.03:0,26,416	0/1:6,0:6:55.29:59,0,55	0/0:36,0:24:63.02:0,63,760	0/0:27,0:16:48.15:0,48,607	0/0:24,0:23:18.64:0,19,247	0/1:11,7:18:99:306,0,195	0/1:18,2:21:99:165,0,365	0/0:36,0:35:99:0,100,1365	0/1:10,12:22:99:456,0,137	0/1:24,0:22:40.17:40,0,541	0/0:7,0:7:6.20:0,6,78	0/0:41,0:41:79.08:0,79,1281	0/0:19,0:19:35.68:0,36,726	0/0:23,0:23:35.39:0,35,674	0/0:40,0:38:75.15:0,75,1380	0/0:37,0:37:66.16:0,66,1105	0/0:24,0:23:56.83:0,57,1152	0/1:19,0:19:33.81:34,0,268	0/0:16,0:16:38.38:0,38,609	0/0:16,0:16:23.77:0,24,655	0/0:35,0:33:51.04:0,51,956	0/0:18,0:17:24.06:0,24,461	0/0:23,0:22:24.06:0,24,411	0/0:32,0:31:50.59:0,51,811	0/0:15,0:14:23.64:0,24,429	0/0:34,0:34:73.62:0,74,1778	0/0:29,0:29:30.47:0,30,576	0/0:8,0:8:21.05:0,21,394
chr10	40499257	.	TG	T	1968.44	PASS	AB=0.545;AC=29;AF=0.518;AN=56;BaseQRankSum=-1.460;DP=236;FS=7.643;HRun=9;HaplotypeScore=35.8513;InbreedingCoeff=0.7424;MQ=83.73;MQ0=0;MQRankSum=-1.164;QD=15.38;ReadPosRankSum=2.862;VQSLOD=2.8701;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,12:14:24:220,24,0	1/1:0,7:7:18.01:165,18,0	0/0:13,0:11:22.76:0,23,218	0/0:15,0:15:10.22:0,10,105	0/0:3,0:6:10.84:0,11,65	1/1:1,2:3:3:27,3,0	1/1:1,6:7:9:82,9,0	1/1:2,10:12:24:219,24,0	0/0:5,0:5:2.60:0,3,10	1/1:1,6:7:18.01:165,18,0	0/0:0,4:4:0:0,0,0	0/0:16,0:16:36.10:0,36,406	0/0:4,0:4:2.61:0,3,24	0/0:10,0:10:0:0,0,0	0/0:4,0:6:5.24:0,5,48	0/0:2,0:5:11.51:0,12,62	0/0:14,0:14:36.11:0,36,411	1/1:2,12:14:21.01:192,21,0	0/1:1,5:6:4.73:108,0,5	1/1:1,9:10:24.01:219,24,0	1/1:2,6:8:9:82,9,0	1/1:4,4:8:14.35:136,14,0	0/0:3,0:3:9.01:0,9,94	0/0:7,0:7:21.06:0,21,242	1/1:2,9:11:14.98:137,15,0	1/1:2,4:6:12.01:110,12,0	1/1:1,10:11:23.99:220,24,0	1/1:1,3:4:9:82,9,0
chr10	40499409	.	CTCTA	C	1629.12	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=6.257;DP=591;FS=0.674;HRun=0;HaplotypeScore=104.7482;InbreedingCoeff=0.9969;MQ=70.84;MQ0=0;MQRankSum=-3.372;QD=41.77;ReadPosRankSum=0.512;VQSLOD=3.9798;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,102,2622	0/0:7,0:7:21.07:0,21,566	0/0:35,0:33:77.42:0,77,1688	0/0:32,0:30:33.16:0,33,1231	0/0:12,0:12:33.11:0,33,855	1/1:0,11:11:30.03:529,30,0	1/1:1,18:19:39.13:733,39,0	0/0:35,0:35:99:0,102,2526	1/1:0,9:9:27.09:509,27,0	0/0:33,0:33:96.30:0,96,2383	0/0:17,0:17:42.13:0,42,1076	0/0:23,0:23:66.23:0,66,1736	0/0:20,0:20:60.18:0,60,1497	0/0:20,0:20:60.19:0,60,1535	0/0:19,0:19:51.16:0,51,1320	0/0:16,0:16:45.15:0,45,1213	0/0:25,0:25:66.21:0,66,1699	0/0:22,0:22:63.18:0,63,1639	0/0:24,0:24:66.13:0,66,1361	0/0:31,0:31:93.24:0,93,2143	0/0:26,0:26:72.19:0,72,1726	0/0:9,0:9:27.08:0,27,672	0/0:11,0:11:30.10:0,30,809	0/0:22,0:22:63.20:0,63,1642	0/0:9,0:9:27.09:0,27,728	0/0:27,0:27:81.27:0,81,2122	0/0:24,0:23:72.25:0,72,1916	0/0:17,0:17:51.18:0,51,1361
chr10	40501060	.	AC	A	12443.75	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=13.101;DP=594;FS=0.000;HRun=2;HaplotypeScore=56.7662;InbreedingCoeff=0.9995;MQ=86.37;MQ0=0;MQRankSum=-5.134;QD=35.96;ReadPosRankSum=1.830;VQSLOD=5.2505;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:72.24:0,72,1076	1/1:0,10:10:27.09:351,27,0	0/0:21,0:21:63.19:0,63,891	0/0:22,0:22:57.16:0,57,815	1/1:0,20:20:60.13:758,60,0	0/0:27,0:26:81.25:0,81,1174	0/0:21,0:21:63.21:0,63,944	1/1:1,31:32:90.26:1138,90,0	0/0:9,0:9:27.09:0,27,403	1/1:0,24:24:72.23:933,72,0	1/1:1,29:30:87.07:1053,87,0	0/0:21,0:21:63.21:0,63,942	0/0:11,0:11:30.10:0,30,449	0/0:19,0:19:54.18:0,54,807	1/1:0,25:25:66.21:857,66,0	1/1:0,19:19:48.16:623,48,0	1/1:0,22:22:63.20:818,63,0	1/1:0,12:12:33.11:428,33,0	1/1:0,18:18:54.18:701,54,0	1/1:0,26:26:78.25:1008,78,0	1/1:0,26:26:66.21:857,66,0	0/0:20,0:20:60.20:0,60,892	0/0:32,0:32:96.33:0,96,1433	0/0:21,0:21:63.20:0,63,925	1/1:0,12:12:30.10:387,30,0	1/1:1,23:24:69.22:896,69,0	1/1:1,28:28:78.25:1013,78,0	1/1:0,17:17:48.16:623,48,0
chr10	40501612	.	AG	A	920.29	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.961;DP=468;FS=3.760;HRun=3;HaplotypeScore=44.5765;InbreedingCoeff=0.8174;MQ=90.79;MQ0=0;MQRankSum=-2.700;QD=29.69;ReadPosRankSum=1.437;VQSLOD=2.8840;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,129,1858	0/0:2,0:2:6.02:0,6,86	0/0:22,0:22:66.22:0,66,938	0/0:18,0:18:51.16:0,51,710	0/0:11,0:11:33.11:0,33,475	0/0:25,0:25:72.21:0,72,994	0/0:25,0:25:69.23:0,69,992	0/0:21,0:21:57.19:0,57,821	0/0:8,0:8:24.08:0,24,345	0/0:11,0:11:33.11:0,33,475	0/0:1,0:1:3.01:0,3,43	0/0:23,0:23:69.23:0,69,992	1/1:0,18:18:51.16:632,51,0	1/1:0,13:13:33.10:409,33,0	0/0:17,0:17:51.16:0,51,717	0/0:13,0:13:39.09:0,39,537	0/0:32,0:32:90.26:0,90,1270	0/0:34,0:34:99:0,102,1464	0/0:20,0:20:59.41:0,59,827	0/0:6,0:6:18.06:0,18,259	0/0:34,0:34:99:0,102,1469	0/0:9,0:9:21.07:0,21,302	0/0:6,0:6:18.06:0,18,253	0/0:22,0:22:66.18:0,66,926	0/0:3,0:3:9.03:0,9,130	0/0:17,0:17:51.16:0,51,717	0/0:9,0:9:27.09:0,27,388	0/0:3,0:3:9.03:0,9,130
chr10	40501773	.	C	CG	1642.86	PASS	AB=0.921;AC=30;AF=0.625;AN=48;BaseQRankSum=-1.715;DP=158;FS=20.411;HRun=0;HaplotypeScore=42.7925;InbreedingCoeff=0.3303;MQ=82.43;MQ0=0;MQRankSum=0.270;QD=14.04;ReadPosRankSum=0.265;VQSLOD=2.5215;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,1:6:18.01:202,18,0	./.	0/0:11,0:11:29.94:0,30,345	0/0:7,0:6:11.94:0,12,100	0/0:0,2:2:1.82:0,2,5	0/1:4,0:4:11:16,0,11	0/1:9,0:9:2.43:48,0,2	1/1:2,3:5:5.02:31,5,0	0/1:4,0:4:11.46:24,0,11	1/1:0,3:3:8.99:91,9,0	./.	0/1:11,1:12:20.68:30,0,21	0/0:7,0:7:21.06:0,21,266	0/0:8,0:8:23.69:0,24,262	1/1:0,8:8:18.06:259,18,0	1/1:1,8:10:18.06:259,18,0	1/1:2,9:12:15.05:215,15,0	1/1:0,4:4:9.03:126,9,0	0/1:3,0:3:12.78:23,0,13	1/1:2,1:3:5.52:34,6,0	1/1:4,15:19:17.73:229,18,0	1/1:0,1:1:3.01:45,3,0	0/0:4,0:4:0.52:0,1,8	1/1:8,1:9:11.36:72,11,0	0/1:1,2:3:5.76:38,0,6	1/1:0,2:2:6:62,6,0	./.	./.
chr10	40501972	.	CT	C	5001.83	PASS	AB=1.000;AC=39;AF=0.722;AN=54;BaseQRankSum=2.299;DP=298;FS=14.720;HRun=8;HaplotypeScore=35.4236;InbreedingCoeff=0.7776;MQ=80.84;MQ0=0;MQRankSum=-1.212;QD=23.16;ReadPosRankSum=1.371;VQSLOD=3.6805;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,20:21:60.05:569,60,0	1/1:0,1:1:3:29,3,0	0/1:10,0:10:3.43:3,0,199	0/0:6,0:6:9.03:0,9,109	1/1:0,2:2:6.01:58,6,0	0/0:3,0:3:6.01:0,6,63	0/0:21,0:21:54.17:0,54,652	1/1:1,3:4:9.01:87,9,0	0/0:9,0:9:24.04:0,24,275	1/1:2,6:8:15.02:145,15,0	1/1:1,3:4:6.01:58,6,0	0/0:22,0:22:66.18:0,66,775	1/1:0,7:7:15.02:145,15,0	1/1:0,8:8:24.04:232,24,0	1/1:0,8:8:15.02:145,15,0	1/1:0,10:10:30.05:290,30,0	1/1:1,34:36:99:962,101,0	1/1:2,24:26:60.10:579,60,0	1/1:2,9:11:27.01:253,27,0	1/1:0,6:6:18.03:174,18,0	1/1:5,21:26:60.08:579,60,0	1/1:0,9:9:27.04:261,27,0	0/0:2,0:2:6.02:0,6,72	0/0:19,0:19:54.17:0,54,652	1/1:0,8:8:21.03:203,21,0	1/1:2,7:9:21.03:203,21,0	1/1:0,2:2:3:29,3,0	./.
chr10	40506771	.	TGTGCTTGCTA	T	2878.41	PASS	AC=4;AF=0.077;AN=52;BaseQRankSum=8.876;DP=591;FS=1.477;HRun=0;HaplotypeScore=178.6295;InbreedingCoeff=0.9885;MQ=54.20;MQ0=18;MQRankSum=-8.835;QD=77.79;ReadPosRankSum=3.260;VQSLOD=3.6250;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,123,6382	0/0:12,0:12:36.11:0,36,1735	./.	./.	0/0:28,0:25:66.19:0,66,3073	0/0:23,0:23:69.22:0,69,3275	0/0:22,0:19:57.16:0,57,2490	0/0:26,0:25:63.17:0,63,3049	0/0:16,0:16:45.15:0,45,2273	0/0:19,0:18:54.19:0,54,2773	0/0:17,0:17:51.18:0,51,2707	0/0:31,1:32:13.70:0,14,4430	1/1:4,13:15:39.13:1270,39,0	1/1:3,17:19:51.18:1729,51,0	0/0:31,0:30:87.30:0,87,4630	0/0:26,0:25:75.24:0,75,3711	0/0:28,0:28:81.28:0,81,4159	0/0:38,0:36:99:0,99,4960	0/0:18,0:18:54.19:0,54,2821	0/0:23,0:23:69.24:0,69,3644	0/0:18,0:18:48.16:0,48,2342	0/0:24,0:24:63.20:0,63,3071	0/0:16,0:15:39.13:0,39,2016	0/0:25,0:23:69.24:0,69,3405	0/0:13,0:12:36.12:0,36,1929	0/0:21,0:21:63.22:0,63,3248	0/0:23,0:23:66.23:0,66,3429	0/0:11,0:10:30.10:0,30,1499
chr10	40506994	.	CCCTCTCTCCCTT	C	3400.43	PASS	AB=0.510;AC=3;AF=0.054;AN=56;BaseQRankSum=9.088;DP=736;FS=12.619;HRun=0;HaplotypeScore=248.1252;InbreedingCoeff=0.6477;MQ=69.51;MQ0=1;MQRankSum=-8.460;QD=68.01;ReadPosRankSum=2.911;VQSLOD=2.0582;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,123,6971	0/0:13,0:13:39.13:0,39,2126	0/0:35,0:29:59.81:0,60,2668	0/0:29,0:24:49.90:0,50,2192	0/0:26,0:26:72.25:0,72,4055	0/0:23,0:23:69.22:0,69,3979	0/0:23,0:23:69.18:0,69,3290	0/0:21,0:22:57.13:0,57,2515	0/0:26,0:26:75.26:0,75,3775	0/0:24,0:24:66.23:0,66,3605	0/0:18,0:18:51.18:0,51,2910	0/0:35,0:35:99:0,102,5719	0/1:1,25:26:48.52:1952,0,49	1/1:0,24:24:39.13:1449,39,0	0/0:36,0:36:99:0,105,6089	0/0:34,0:34:96.33:0,96,4973	0/0:21,0:21:57.20:0,57,2737	0/0:20,0:20:60.21:0,60,3376	0/0:20,0:20:54.19:0,54,2775	0/0:18,0:18:51.18:0,51,3008	0/0:34,0:34:90.28:0,90,4857	0/0:20,0:20:60.21:0,60,3317	0/0:30,0:30:87.30:0,87,4633	0/0:36,0:36:99:0,102,5355	0/0:22,0:22:60.17:0,60,3338	0/0:32,0:32:96.24:0,96,5128	0/0:24,0:24:66.23:0,66,3602	0/0:20,0:20:60.21:0,60,3374
chr10	40508141	.	GT	G	1008.16	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.212;DP=714;FS=6.754;HRun=8;HaplotypeScore=69.0795;InbreedingCoeff=0.9959;MQ=76.18;MQ0=0;MQRankSum=0.259;QD=21.92;ReadPosRankSum=2.069;VQSLOD=4.2597;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,117,1372	0/0:14,0:14:42.12:0,42,496	0/0:18,0:17:28.45:0,28,298	0/0:14,1:15:28.66:0,29,310	0/0:32,0:32:81.23:0,81,957	0/0:14,0:14:36.11:0,36,435	0/0:28,0:28:78.23:0,78,931	0/0:30,0:30:69.19:0,69,805	0/0:18,1:19:19.13:0,19,479	0/0:30,0:30:75.23:0,75,905	0/0:24,0:24:72.20:0,72,850	0/0:28,1:29:52.25:0,52,892	1/1:2,24:26:66.10:637,66,0	1/1:2,18:20:51.08:493,51,0	0/0:34,0:34:90.24:0,90,1054	0/0:31,0:31:87.21:0,87,995	0/0:34,0:34:96.27:0,96,1145	0/0:23,0:23:66.18:0,66,784	0/0:23,0:23:63.15:0,63,726	0/0:26,0:26:72.18:0,72,826	0/0:26,0:26:69.21:0,69,827	0/0:28,0:28:75.23:0,75,900	0/0:22,0:22:63.19:0,63,761	0/0:22,0:22:57.13:0,57,672	0/0:26,0:26:75.22:0,75,897	0/0:27,0:27:78.22:0,78,923	0/0:29,0:28:52.33:0,52,888	0/0:20,0:20:51.16:0,51,615
chr10	40508468	.	ACCT	A	1791.07	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.649;DP=796;FS=0.605;HRun=0;HaplotypeScore=119.0579;InbreedingCoeff=0.9995;MQ=64.15;MQ0=0;MQRankSum=-1.431;QD=40.71;ReadPosRankSum=1.963;VQSLOD=5.0694;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,141,3087	0/0:16,0:16:48.14:0,48,1042	0/0:44,0:42:99:0,112,2167	0/0:34,0:31:87.28:0,87,1947	0/0:22,0:22:60.21:0,60,1314	0/0:26,0:26:69.24:0,69,1563	0/0:21,0:21:63.22:0,63,1391	0/0:46,0:46:99:0,123,2733	0/0:20,0:20:60.19:0,60,1295	0/0:27,0:27:75.25:0,75,1615	0/0:18,0:18:54.19:0,54,1216	0/0:37,0:37:99:0,111,2448	1/1:0,19:19:48.16:783,48,0	1/1:1,24:25:69.23:1129,69,0	0/0:31,0:31:93.32:0,93,2089	0/0:33,0:33:96.33:0,96,2122	0/0:21,0:21:57.20:0,57,1291	0/0:35,0:35:99:0,99,2243	0/0:27,0:27:72.20:0,72,1505	0/0:26,0:26:72.25:0,72,1615	0/0:49,0:49:99:0,141,3129	0/0:26,0:26:69.18:0,69,1494	0/0:21,0:21:63.22:0,63,1426	0/0:28,0:28:81.28:0,81,1797	0/0:27,0:27:81.28:0,81,1835	0/0:24,0:24:69.23:0,69,1501	0/0:28,0:28:78.25:0,78,1704	0/0:9,0:9:27.09:0,27,612
chr10	40508501	.	ACC	A	2882.64	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.481;DP=791;FS=20.683;HRun=2;HaplotypeScore=97.7562;InbreedingCoeff=0.9999;MQ=68.10;MQ0=0;MQRankSum=-1.931;QD=39.49;ReadPosRankSum=3.360;VQSLOD=2.4895;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,49:49:99:1976,123,0	0/0:12,0:12:36.10:0,36,679	0/0:32,0:30:76.43:0,76,1654	0/0:29,0:26:78.26:0,78,1416	0/0:29,0:29:87.30:0,87,1729	0/0:28,0:28:84.29:0,84,1706	0/0:24,0:24:72.23:0,72,1404	0/0:37,0:37:99:0,108,2195	0/0:21,0:21:63.21:0,63,1231	0/0:32,0:32:93.28:0,93,1738	0/0:27,0:27:81.28:0,81,1645	0/0:34,0:34:99:0,102,1951	0/0:18,0:18:45.15:0,45,914	0/0:30,0:30:84.28:0,84,1643	0/0:36,0:36:99:0,108,2194	0/0:31,0:31:93.31:0,93,1830	0/0:25,0:25:75.26:0,75,1523	0/0:31,0:31:93.26:0,93,1778	0/0:32,0:32:80.13:0,80,1738	0/0:33,0:33:93.29:0,93,1805	0/0:39,0:39:99:0,114,2224	1/1:0,24:24:63.22:1028,63,0	0/0:19,0:19:57.20:0,57,1146	0/0:30,0:30:89.52:0,90,1737	0/0:25,0:25:75.26:0,75,1512	0/0:24,0:24:72.25:0,72,1463	0/0:26,0:26:78.27:0,78,1571	0/0:14,0:14:42.14:0,42,830
chr10	40508970	.	A	ACTT	9271.60	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-7.989;DP=568;FS=1.376;HRun=0;HaplotypeScore=109.7608;InbreedingCoeff=0.9756;MQ=77.22;MQ0=1;MQRankSum=-2.248;QD=22.95;ReadPosRankSum=0.793;VQSLOD=4.8344;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,16:26:32.80:513,33,0	1/1:1,8:9:17.93:277,18,0	0/0:18,0:16:32.92:0,33,333	0/0:26,0:18:16.45:0,16,205	1/1:7,15:22:44.15:492,44,0	0/0:16,0:16:42.09:0,42,528	0/0:21,0:21:51.09:0,51,633	1/1:14,17:31:59.60:833,60,0	0/0:28,0:28:66.10:0,66,739	1/1:3,16:20:52.52:631,53,0	1/1:4,5:10:22.18:305,22,0	0/0:30,0:30:76.70:0,77,861	1/1:9,0:30:32.42:430,32,0	1/1:9,0:18:21.05:263,21,0	1/1:6,22:30:32.90:603,33,0	1/1:6,15:21:12.03:238,12,0	1/1:4,18:22:18.05:326,18,0	1/1:1,11:12:24.08:478,24,0	1/1:7,14:22:56:636,56,0	1/1:3,11:15:35.92:485,36,0	1/1:8,1:9:9.01:147,9,0	1/1:6,15:21:32.89:395,33,0	0/0:12,0:12:35.68:0,36,453	0/0:13,0:13:27.02:0,27,274	1/1:2,15:17:15.04:252,15,0	1/1:4,20:24:60.56:1038,61,0	1/1:6,21:27:26.60:497,27,0	1/1:7,11:18:27.04:435,27,0
chr10	40508977	.	C	CTTCT	6557.56	PASS	AB=0.988;AC=30;AF=0.536;AN=56;BaseQRankSum=-5.434;DP=579;FS=0.796;HRun=0;HaplotypeScore=126.1780;InbreedingCoeff=0.2568;MQ=76.10;MQ0=1;MQRankSum=0.440;QD=15.69;ReadPosRankSum=3.982;VQSLOD=4.6775;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:30,1:31:14.50:353,0,15	1/1:8,1:9:17.97:222,18,0	0/0:22,0:19:34.78:0,35,360	0/0:25,0:16:5.08:0,5,236	1/1:25,0:25:43.06:431,43,0	0/0:15,0:15:45.06:0,45,638	0/0:17,0:19:54.05:0,54,773	1/1:26,0:27:41.32:649,41,0	0/0:25,0:25:68.98:0,69,845	1/1:25,0:25:0.07:502,0,0	0/1:13,0:13:46.16:217,0,46	0/0:26,0:28:79.63:0,80,987	0/1:19,0:19:1.08:286,0,1	0/1:17,0:16:36.63:37,0,67	1/1:28,0:28:16.38:420,16,0	1/1:21,0:21:12.03:156,12,0	1/1:24,0:24:3.69:220,4,0	1/1:13,0:13:3.59:257,4,0	0/1:23,1:24:32.67:540,0,33	0/1:19,1:20:16.51:380,0,17	0/1:11,0:11:8.49:108,0,8	0/1:24,0:24:4.61:263,0,5	0/0:14,0:14:38.61:0,39,558	0/0:13,0:13:31.99:0,32,323	0/1:17,0:17:5.52:151,0,6	1/1:27,1:28:23.60:780,24,0	0/1:28,0:28:28.07:279,0,28	1/1:13,0:14:27.49:307,27,0
chr10	40508978	.	T	TTC	5362.50	PASS	AB=0.949;AC=23;AF=0.411;AN=56;BaseQRankSum=-3.809;DP=582;FS=2.132;HRun=0;HaplotypeScore=107.5496;InbreedingCoeff=-0.2316;MQ=76.01;MQ0=1;MQRankSum=0.623;QD=12.59;ReadPosRankSum=6.463;VQSLOD=4.2857;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:27,4:31:64.42:366,0,64	1/1:9,0:9:16.98:146,17,0	0/0:22,0:19:45.61:0,46,412	0/1:24,0:16:8.77:9,0,221	1/1:25,2:27:27.98:414,28,0	0/0:16,0:16:45.10:0,45,554	0/0:19,0:19:54.06:0,54,643	0/1:24,1:25:33.46:564,0,33	0/0:26,0:26:69.10:0,69,767	0/1:24,1:25:25.59:454,0,26	0/1:12,1:13:85.13:187,0,85	0/0:29,0:29:82.67:0,83,894	0/1:18,0:19:42.67:120,0,43	0/0:17,0:16:3.25:0,3,171	0/1:27,1:28:16.07:350,0,16	0/1:19,0:19:9.11:106,0,9	0/1:21,1:22:9.16:179,0,9	0/1:14,0:14:4.92:198,0,5	0/1:23,0:23:99:397,0,111	0/1:20,1:21:84.21:325,0,84	0/1:6,5:11:17.05:103,0,17	0/1:23,2:25:44.07:288,0,44	0/0:14,0:14:41.68:0,42,505	0/0:13,0:13:11.30:0,11,281	0/1:17,0:17:14.22:124,0,14	0/1:28,0:28:66.46:562,0,66	0/1:29,0:29:71.73:206,0,72	1/1:13,2:15:10.19:263,10,0
chr10	40508979	.	T	TC	2664.79	PASS	AB=0.993;AC=23;AF=0.411;AN=56;BaseQRankSum=4.920;DP=572;FS=13.784;HRun=0;HaplotypeScore=100.9977;InbreedingCoeff=-0.2903;MQ=76.68;MQ0=1;MQRankSum=-0.735;QD=6.39;ReadPosRankSum=8.660;VQSLOD=1.2410;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:29:99:131,0,192	1/1:9,0:9:16.94:91,17,0	0/0:23,0:20:42.79:0,43,375	0/1:24,0:15:10.39:10,0,225	1/1:23,2:25:6.33:267,6,0	0/0:16,0:16:45.10:0,45,532	0/0:18,0:18:54.06:0,54,617	0/1:24,1:25:66.43:349,0,66	0/0:24,0:24:69.11:0,69,744	0/1:25,0:25:99:292,0,101	0/1:13,0:13:74.64:75,0,130	0/0:30,0:30:82.61:0,83,864	0/1:18,0:18:20.54:21,0,154	0/0:17,0:16:34.71:0,35,364	0/1:28,0:28:86.28:159,0,86	0/1:17,0:17:34.36:46,0,34	0/1:22,0:22:40.31:75,0,40	0/1:14,0:14:36.79:90,0,37	0/1:21,2:23:99:320,0,185	0/1:20,0:20:99:182,0,167	0/1:12,0:12:33.90:34,0,66	0/1:25,0:25:99:155,0,130	0/0:14,0:14:41.69:0,42,485	0/0:13,0:13:38.52:0,39,363	0/1:17,0:17:47.60:59,0,48	0/1:29,0:29:99:282,0,133	0/1:29,0:29:83.20:83,0,176	1/1:13,0:13:4.98:115,5,0
chr10	40510891	.	A	AG	8076.46	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-14.739;DP=708;FS=3.599;HRun=2;HaplotypeScore=64.5651;InbreedingCoeff=0.9988;MQ=84.58;MQ0=0;MQRankSum=-1.677;QD=38.83;ReadPosRankSum=4.969;VQSLOD=5.2751;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,120,1484	0/0:7,0:7:21.07:0,21,259	0/0:23,0:23:69.21:0,69,846	0/0:21,0:21:48.14:0,48,577	0/0:24,0:24:69.22:0,69,855	1/1:0,22:22:63.21:907,63,0	1/1:0,23:23:69.23:994,69,0	0/0:37,0:37:96.27:0,96,1147	1/1:2,19:21:57.19:820,57,0	0/0:22,0:22:60.19:0,60,744	0/0:8,0:8:24.06:0,24,284	1/1:0,34:34:99:1424,99,0	1/1:1,25:26:66.22:950,66,0	1/1:2,28:30:81.27:1166,81,0	0/0:50,0:50:99:0,150,1847	0/0:35,0:35:99:0,99,1227	0/0:26,0:26:78.25:0,78,967	0/0:20,0:20:57.18:0,57,707	0/0:20,0:20:60.17:0,60,721	0/0:20,0:20:57.18:0,57,706	0/0:41,0:41:99:0,111,1376	0/0:18,0:18:51.16:0,51,632	1/1:0,23:23:60.20:864,60,0	1/1:2,27:29:66.22:951,66,0	0/0:25,0:25:66.21:0,66,818	0/0:27,0:27:75.21:0,75,898	0/0:24,0:24:72.19:0,72,866	0/0:9,0:9:27.08:0,27,335
chr10	40514314	.	T	TGG	2089.69	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=-2.419;DP=386;FS=23.671;HRun=8;HaplotypeScore=54.6249;InbreedingCoeff=0.7913;MQ=76.77;MQ0=0;MQRankSum=-0.974;QD=12.98;ReadPosRankSum=-2.370;VQSLOD=-0.5008;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:11:5.85:54,6,0	0/0:6,0:6:15.03:0,15,166	0/0:15,0:15:29.97:0,30,324	0/1:9,0:9:9.70:10,0,77	0/0:14,0:14:39.08:0,39,423	1/1:2,13:15:18.06:267,18,0	1/1:2,21:24:39.13:619,39,0	1/1:9,0:10:6:54,6,0	1/1:1,13:14:21.07:333,21,0	0/0:23,0:23:60.05:0,60,649	0/0:17,0:17:39.08:0,39,423	0/0:26,0:26:78.21:0,78,868	1/1:2,12:15:14.45:199,14,0	1/1:1,10:11:18.06:286,18,0	0/0:13,0:13:33.08:0,33,367	0/0:17,0:17:45.10:0,45,491	0/0:31,0:31:84.19:0,84,912	0/0:19,0:19:51.13:0,51,563	1/1:5,0:6:3:29,3,0	1/1:3,0:5:3.01:31,3,0	1/1:5,2:9:12.03:153,12,0	1/1:7,0:7:3:25,3,0	0/0:6,0:7:17.78:0,18,179	0/0:17,0:17:45.03:0,45,484	0/0:20,0:20:48.12:0,48,530	1/1:2,0:8:9.47:90,9,0	1/1:5,0:6:8.47:55,8,0	1/1:1,10:11:6.02:95,6,0
chr10	40515036	.	GGGGGA	G	2138.79	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=3.171;DP=361;FS=16.777;HRun=0;HaplotypeScore=104.2264;InbreedingCoeff=0.4061;MQ=80.99;MQ0=3;MQRankSum=-5.327;QD=18.13;ReadPosRankSum=-3.412;VQSLOD=1.0537;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:20,0:20:27.98:28,0,618	0/0:2,0:2:6.02:0,6,143	0/0:25,0:18:42.77:0,43,822	0/0:24,0:18:12.99:0,13,506	0/0:10,0:10:27.09:0,27,808	1/1:3,13:16:33.11:636,33,0	1/1:2,13:15:27.05:517,27,0	0/1:18,0:18:99:103,0,479	1/1:1,17:18:45.15:907,45,0	0/0:7,0:7:18.05:0,18,445	0/0:9,0:9:27.08:0,27,737	0/0:13,0:13:39.13:0,39,1162	0/0:9,0:9:27.07:0,27,523	0/1:13,0:13:15.34:15,0,483	0/0:19,0:19:57.16:0,57,1592	0/0:17,0:17:51.18:0,51,1523	0/0:15,0:15:42.14:0,42,1135	0/0:6,0:6:12.04:0,12,327	0/0:13,0:13:3.56:0,4,525	0/1:7,0:7:0.48:0,0,232	0/0:13,0:13:32.47:0,32,614	0/0:12,0:12:30.10:0,30,627	0/0:10,0:10:27.09:0,27,794	0/0:8,0:8:18.03:0,18,374	0/0:12,0:12:33.11:0,33,938	0/1:11,0:11:92.12:92,0,310	0/0:15,0:15:8.62:0,9,645	0/0:4,0:4:9.03:0,9,159
chr10	40515041	.	A	AG	4531.20	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=7.510;DP=368;FS=7.219;HRun=5;HaplotypeScore=73.2852;InbreedingCoeff=0.8794;MQ=84.49;MQ0=3;MQRankSum=2.843;QD=28.32;ReadPosRankSum=-0.878;VQSLOD=4.7477;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,14:18:36.12:483,36,0	0/0:3,0:3:9.03:0,9,102	0/0:26,0:21:10.07:0,10,370	0/0:22,0:16:10.59:0,11,176	0/0:10,0:10:30.07:0,30,330	0/0:15,0:15:13.93:0,14,35	0/0:15,0:15:12.44:0,12,31	1/1:7,15:22:57.14:724,57,0	0/1:17,0:17:18.46:77,0,18	0/0:7,0:7:21.05:0,21,232	0/0:9,0:9:24.07:0,24,270	0/0:13,0:13:39.10:0,39,434	1/1:2,9:11:24.08:321,24,0	1/1:0,14:14:36.12:481,36,0	0/0:20,0:20:60.15:0,60,664	0/0:18,0:18:54.15:0,54,612	0/0:16,0:16:30.07:0,30,327	0/0:6,0:6:9.03:0,9,102	1/1:0,12:12:33.03:374,33,0	1/1:0,9:9:21.02:247,21,0	1/1:4,10:14:33.10:426,33,0	1/1:1,12:13:27.09:361,27,0	0/0:10,0:10:29.92:0,30,320	0/0:7,0:7:15.04:0,15,170	0/0:11,0:11:33.09:0,33,374	1/1:0,11:11:33.07:397,33,0	1/1:0,15:15:39.13:519,39,0	1/1:0,4:4:9.03:121,9,0
chr10	40515750	.	CATTTTTTTTTTT	C	8762.07	PASS	AB=0.786;AC=23;AF=0.411;AN=56;BaseQRankSum=4.165;DP=386;FS=20.409;HRun=0;HaplotypeScore=126.1281;InbreedingCoeff=0.6140;MQ=59.21;MQ0=19;MQRankSum=-5.720;QD=44.25;ReadPosRankSum=5.964;VQSLOD=2.4477;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:16,8:23:53.93:1153,54,0	0/0:4,0:4:6.02:0,6,260	0/0:26,0:9:26.98:0,27,757	0/0:18,0:7:10.13:0,10,130	0/0:16,0:17:51.11:0,51,1528	1/1:8,0:17:44.67:760,45,0	1/1:5,1:10:23.54:394,24,0	1/1:23,0:21:42.93:670,43,0	0/1:6,0:11:33.51:392,0,34	0/0:20,0:18:48.10:0,48,1117	0/0:11,0:11:27.09:0,27,852	0/0:13,0:13:27.05:0,27,833	0/1:5,1:6:29.54:230,0,30	1/1:9,3:12:26.65:631,27,0	0/0:5,0:5:15.01:0,15,265	0/0:14,0:14:42.09:0,42,1226	0/0:18,0:16:44.49:0,44,1233	0/0:13,0:10:30.06:0,30,728	0/1:12,3:16:42.10:757,0,42	1/1:6,5:9:17.79:520,18,0	0/1:8,1:8:3.17:273,0,3	1/1:8,7:18:47.81:1187,48,0	0/0:11,0:11:30.06:0,30,875	0/0:6,0:6:4.66:0,5,22	0/0:12,0:11:20.27:0,20,673	0/1:9,3:13:87.75:610,0,88	1/1:10,3:14:40.72:691,41,0	1/1:7,2:9:26.93:495,27,0
chr10	40515787	.	T	TC	5088.20	PASS	AC=26;AF=0.520;AN=50;BaseQRankSum=2.250;DP=369;FS=2.923;HRun=0;HaplotypeScore=73.5262;InbreedingCoeff=0.9608;MQ=37.61;MQ0=38;MQRankSum=-5.778;QD=26.92;ReadPosRankSum=3.319;VQSLOD=5.6786;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,11:15:27.08:367,27,0	0/0:4,0:3:9:0,9,105	./.	./.	0/0:16,0:16:36.07:0,36,453	1/1:1,19:19:39.13:557,39,0	1/1:3,9:10:18.06:255,18,0	1/1:2,12:13:33.08:444,33,0	1/1:2,10:11:27.09:382,27,0	0/0:15,0:14:33.05:0,33,390	0/0:17,0:17:16.24:0,16,329	0/0:15,0:14:33.02:0,33,377	1/1:0,9:8:18.06:246,18,0	1/1:0,11:11:30.10:421,30,0	0/0:13,0:12:27.01:0,27,337	0/0:16,0:15:30.09:0,30,393	0/0:23,0:19:45.05:0,45,549	0/0:12,0:10:17.89:0,18,219	1/1:3,11:12:33.11:460,33,0	1/1:0,16:15:30.10:430,30,0	./.	1/1:1,19:19:45.15:640,45,0	0/0:12,0:11:21.05:0,21,255	0/0:17,0:14:36.05:0,36,442	0/0:13,0:12:23.99:0,24,272	1/1:4,17:18:6.14:496,6,0	1/1:4,7:10:15.05:215,15,0	1/1:5,4:4:12.04:174,12,0
chr10	40515865	.	AT	A	2984.10	PASS	AB=0.833;AC=19;AF=0.339;AN=56;BaseQRankSum=-7.795;DP=521;FS=3.036;HRun=11;HaplotypeScore=85.0377;InbreedingCoeff=0.8739;MQ=63.49;MQ0=8;MQRankSum=4.966;QD=15.07;ReadPosRankSum=6.107;VQSLOD=4.2577;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:38:41.94:0,42,205	1/1:2,5:7:14.98:123,15,0	0/1:12,3:10:27.16:27,0,83	0/0:16,1:10:29.07:0,29,256	1/1:5,17:22:44.90:365,45,0	0/0:17,0:18:35.91:0,36,203	0/0:6,0:15:11.36:0,11,57	0/0:17,0:23:36.82:0,37,186	0/0:12,0:12:15.25:0,15,93	1/1:3,14:17:41.95:345,42,0	1/1:1,13:15:34.99:276,35,0	0/0:20,0:22:58.11:0,58,562	0/0:6,0:6:14.70:0,15,64	0/0:8,0:7:7.27:0,7,53	1/1:4,13:19:14.04:300,14,0	1/1:4,13:17:32.95:271,33,0	1/1:7,38:47:96.37:774,96,0	1/1:1,21:22:56.93:468,57,0	0/0:3,0:21:35.99:0,36,192	0/0:10,0:11:19.42:0,19,99	0/0:12,0:12:18.24:0,18,99	0/0:12,0:17:27.51:0,28,128	0/0:15,0:16:33.04:0,33,339	0/0:28,0:28:66.15:0,66,695	1/1:3,14:16:29.95:246,30,0	0/0:14,0:20:34.89:0,35,190	0/0:5,0:23:28.84:0,29,140	0/0:1,0:6:5.68:0,6,29
chr10	40516195	.	A	AG	209.83	PASS	AB=0.860;AC=7;AF=0.125;AN=56;BaseQRankSum=5.993;DP=385;FS=12.205;HRun=0;HaplotypeScore=65.8143;InbreedingCoeff=-0.1716;MQ=56.55;MQ0=3;MQRankSum=-4.635;QD=2.41;ReadPosRankSum=2.486;VQSLOD=0.8234;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:22,2:24:29.44:29,0,723	0/0:13,0:13:36.10:0,36,484	0/0:8,0:4:6.49:0,6,81	0/0:8,0:3:3.01:0,3,37	0/1:15,2:17:47.31:47,0,538	0/0:17,0:17:45.11:0,45,598	0/0:8,0:8:24.08:0,24,335	0/0:34,0:30:75.17:0,75,969	0/0:10,0:10:24.08:0,24,335	0/0:23,0:23:63.21:0,63,881	0/0:17,0:17:48.16:0,48,665	0/1:10,1:11:17.69:18,0,347	0/0:6,0:6:9.03:0,9,126	0/1:4,2:6:80.28:80,0,111	0/0:12,0:12:33.11:0,33,461	0/0:10,0:10:30.10:0,30,419	0/0:35,1:36:54.49:0,54,1251	0/0:17,0:17:45.15:0,45,627	0/1:11,1:10:17.69:18,0,344	0/0:15,0:14:30.09:0,30,393	0/0:4,0:4:9.03:0,9,126	0/1:3,1:4:38.70:39,0,75	0/0:6,0:6:15.05:0,15,210	0/0:5,0:5:15.02:0,15,175	0/1:10,3:13:99:107,0,341	0/0:17,1:18:3.22:0,3,604	0/0:19,1:19:9.44:0,9,685	0/0:9,0:9:27.09:0,27,378
chr10	40516274	.	TTCACACACAC	T	4967.13	PASS	AB=0.964;AC=28;AF=0.519;AN=54;BaseQRankSum=2.503;DP=416;FS=7.234;HRun=0;HaplotypeScore=142.6371;InbreedingCoeff=0.1269;MQ=54.60;MQ0=18;MQRankSum=-3.308;QD=17.19;ReadPosRankSum=1.356;VQSLOD=3.3903;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:13,0:14:35.37:35,0,363	0/1:9,0:9:94.80:172,0,95	0/0:20,0:10:30.01:0,30,338	0/0:16,0:11:29.52:0,30,302	0/1:22,0:22:86.01:86,0,231	1/1:13,0:17:26.97:495,27,0	0/1:13,0:14:99:234,0,107	1/1:19,0:16:44.88:383,45,0	1/1:3,0:5:9.01:187,9,0	0/1:18,0:18:2.07:2,0,340	0/1:9,0:9:78.42:117,0,78	0/0:13,0:13:27.06:0,27,958	0/1:6,0:8:53.88:54,0,90	0/0:3,0:13:18.06:0,18,223	0/1:19,0:17:80.63:451,0,81	0/1:12,0:12:99:168,0,139	0/0:24,0:24:30.60:0,31,380	0/1:14,0:12:13.11:13,0,212	1/1:8,2:9:26.93:380,27,0	1/1:10,2:12:20.99:313,21,0	./.	0/1:14,0:15:31.78:32,0,1168	0/0:10,0:10:13.78:0,14,330	0/0:13,0:13:21.05:0,21,653	0/1:22,0:22:99:164,0,272	1/1:15,2:18:22.86:513,23,0	1/1:14,6:18:53.86:953,54,0	1/1:5,1:6:17.93:215,18,0
chr10	40516275	.	TCACACACACACACA	T	4601.87	PASS	AB=1.000;AC=27;AF=0.500;AN=54;BaseQRankSum=6.409;DP=420;FS=18.434;HRun=0;HaplotypeScore=168.1965;InbreedingCoeff=0.4966;MQ=52.67;MQ0=19;MQRankSum=-6.368;QD=19.58;ReadPosRankSum=-0.678;VQSLOD=2.5261;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:14:24.08:0,24,997	1/1:6,3:9:12.04:469,12,0	0/0:20,0:10:9.03:0,9,237	0/0:15,0:10:6.02:0,6,141	1/1:13,8:22:11.95:250,12,0	1/1:19,0:16:18.84:503,19,0	0/1:15,0:14:99:195,0,188	0/0:19,0:16:3.01:0,3,37	1/1:5,0:5:6.02:195,6,0	1/1:15,1:16:3.01:117,3,0	1/1:5,4:9:9.03:340,9,0	0/0:9,0:17:24.08:0,24,1250	0/0:8,0:8:9.03:0,9,329	0/0:15,0:13:18.06:0,18,649	1/1:7,12:17:30.10:1167,30,0	1/1:7,5:12:12.04:469,12,0	1/1:20,4:24:2.77:94,3,0	1/1:14,1:13:3.01:117,3,0	0/1:12,0:10:4.90:5,0,123	0/1:12,0:12:3.14:3,0,39	./.	0/0:16,0:16:36.12:0,36,2128	0/0:9,0:9:8.96:0,9,389	0/0:6,0:16:12.04:0,12,723	1/1:12,8:20:18.06:621,18,0	0/0:19,0:19:10.63:0,11,415	0/1:20,0:15:50.18:50,0,204	0/1:6,0:6:5.77:6,0,63
chr10	40517075	.	C	CT	4518.90	PASS	AB=0.692;AC=26;AF=0.464;AN=56;BaseQRankSum=-3.608;DP=552;FS=0.781;HRun=11;HaplotypeScore=69.6871;InbreedingCoeff=0.6545;MQ=70.07;MQ0=1;MQRankSum=-3.864;QD=15.06;ReadPosRankSum=-3.469;VQSLOD=4.3391;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,35:40:72.10:720,72,0	0/1:6,1:8:10.53:11,0,97	0/0:16,0:16:19.94:0,20,143	0/0:7,0:7:5.96:0,6,44	0/0:12,0:13:25.88:0,26,192	1/1:4,15:19:18.85:373,19,0	0/1:9,14:24:1.55:335,0,2	1/1:20,19:40:26.21:553,26,0	1/1:8,8:17:9.65:260,10,0	0/0:20,1:22:15.43:0,15,282	0/0:15,1:16:8.39:0,8,248	0/0:28,0:30:72.75:0,73,546	1/1:3,9:12:21.02:213,21,0	1/1:4,16:20:15.84:342,16,0	0/0:23,0:25:61.78:0,62,470	0/0:11,0:12:25.92:0,26,192	0/0:28,0:29:79.74:0,80,610	0/0:28,0:28:74.64:0,75,574	1/1:5,15:20:32.99:312,33,0	1/1:7,15:22:30.55:436,31,0	1/1:9,12:21:0.81:190,1,0	1/1:6,12:18:7.67:242,8,0	0/0:18,0:18:38.38:0,38,301	0/0:25,0:26:55.81:0,56,422	0/0:7,0:8:22.96:0,23,168	0/1:12,10:21:70.83:259,0,71	0/1:4,11:15:15.94:214,0,16	1/1:0,2:2:6.01:61,6,0
chr10	40517182	.	T	TGTCGG	19387.15	PASS	AB=0.595;AC=27;AF=0.482;AN=56;BaseQRankSum=6.795;DP=524;FS=8.037;HRun=0;HaplotypeScore=103.5489;InbreedingCoeff=0.9224;MQ=68.98;MQ0=0;MQRankSum=-16.859;QD=70.50;ReadPosRankSum=-1.671;VQSLOD=5.9079;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:9,24:33:81.28:2411,81,0	0/0:4,0:4:12.04:0,12,261	0/0:13,0:13:36.12:0,36,755	0/0:14,0:14:33.11:0,33,663	0/0:19,0:19:54.18:0,54,1147	1/1:2,20:23:60.21:1866,60,0	1/1:2,22:29:66.23:1970,66,0	1/1:9,10:21:48.16:1332,48,0	1/1:0,7:10:20.95:659,21,0	0/0:17,0:17:39.12:0,39,809	0/0:11,0:11:30.10:0,30,638	0/0:21,0:21:63.22:0,63,1368	1/1:2,9:13:27.09:848,27,0	1/1:3,23:28:75.21:2209,75,0	0/0:17,0:17:48.16:0,48,1012	0/0:22,0:22:63.22:0,63,1356	0/0:26,0:25:75.26:0,75,1629	0/0:28,0:28:81.26:0,81,1718	1/1:10,13:23:63.22:1891,63,0	1/1:2,7:12:33.07:862,33,0	1/1:7,7:15:27.09:834,27,0	1/1:6,5:13:23.60:627,24,0	0/0:11,0:11:33.11:0,33,712	0/0:33,0:33:93.22:0,93,1872	0/0:13,0:13:39.13:0,39,847	0/1:8,16:25:31.79:1793,0,32	1/1:2,17:19:45.15:1420,45,0	1/1:1,6:9:21.07:664,21,0
chr10	40517327	.	A	AT	2102.86	PASS	AB=0.828;AC=36;AF=0.643;AN=56;BaseQRankSum=4.412;DP=459;FS=0.000;HRun=14;HaplotypeScore=73.3019;InbreedingCoeff=0.4469;MQ=58.58;MQ0=2;MQRankSum=-1.649;QD=6.70;ReadPosRankSum=-2.380;VQSLOD=2.0437;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:22,11:35:1.13:371,1,0	1/1:1,8:9:14.95:125,15,0	0/1:12,0:9:0:0,0,0	0/1:10,0:6:0:0,0,0	0/0:34,1:37:18.83:0,19,243	1/1:4,6:14:23.20:150,23,0	1/1:11,1:25:40.16:219,40,0	0/1:6,0:11:4.87:43,0,5	1/1:0,1:8:20.04:111,20,0	0/1:11,3:14:13.29:15,0,13	0/1:12,7:21:18.96:97,0,19	0/0:13,0:14:25.61:0,26,160	1/1:4,8:12:18:158,18,0	0/1:12,4:19:5.65:78,0,6	0/0:16,0:17:9.49:0,9,137	0/1:14,2:16:27.11:27,0,94	0/0:20,1:25:37.96:0,38,342	1/1:5,4:10:12.72:95,13,0	1/1:6,0:9:11.48:61,11,0	1/1:14,1:18:17.26:99,17,0	1/1:3,0:8:8.52:42,9,0	1/1:8,3:11:14.98:127,15,0	0/0:15,0:16:16.52:0,17,96	0/0:34,0:34:60.88:0,61,390	0/1:7,5:12:17.62:102,0,18	1/1:6,4:18:15.85:195,16,0	1/1:9,1:11:15.69:89,16,0	1/1:4,2:7:11.78:81,12,0
chr10	40517418	.	AC	A	8259.58	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=9.328;DP=485;FS=7.627;HRun=1;HaplotypeScore=57.0002;InbreedingCoeff=0.9734;MQ=67.41;MQ0=5;MQRankSum=-2.231;QD=33.71;ReadPosRankSum=1.701;VQSLOD=4.0750;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,31:32:75.25:1032,75,0	0/0:8,0:8:21.07:0,21,332	0/0:17,0:13:23.93:0,24,306	0/0:21,0:11:19.01:0,19,245	0/0:22,0:22:55.84:0,56,806	1/1:0,21:21:60.20:823,60,0	1/1:0,23:23:60.20:822,60,0	1/1:0,18:18:54.04:646,54,0	1/1:0,8:8:24.08:331,24,0	0/0:18,0:18:51.16:0,51,785	0/0:18,0:18:51.16:0,51,772	0/0:14,0:14:42.14:0,42,642	1/1:0,18:18:44.98:609,45,0	1/1:0,12:12:30.10:410,30,0	0/0:14,0:14:41.94:0,42,532	0/0:13,0:13:39.11:0,39,571	0/0:28,0:27:81.19:0,81,1196	0/0:13,0:13:39.13:0,39,610	1/1:0,16:17:48.03:567,48,0	1/1:1,12:12:30.07:387,30,0	1/1:1,19:19:54.18:745,54,0	1/1:1,11:11:27.09:364,27,0	0/0:20,0:20:29.34:0,29,730	0/0:25,0:25:69.04:0,69,1096	0/0:9,0:9:27.08:0,27,402	1/1:1,23:24:24.63:810,25,0	1/1:0,25:25:51.17:693,51,0	1/1:1,0:1:2.96:19,3,0
chr10	40517989	.	A	AGTGTGT	7884.22	PASS	AB=1.000;AC=41;AF=0.788;AN=52;BaseQRankSum=8.531;DP=693;FS=13.949;HRun=0;HaplotypeScore=218.6286;InbreedingCoeff=0.7786;MQ=64.78;MQ0=10;MQRankSum=-8.854;QD=15.31;ReadPosRankSum=-4.633;VQSLOD=1.8843;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:20,3:28:14.93:390,15,0	./.	0/0:49,0:32:12.03:0,12,154	0/0:29,0:18:5.73:0,6,42	1/1:20,0:21:5.22:120,5,0	1/1:26,0:28:9.03:235,9,0	1/1:26,0:28:18.06:459,18,0	1/1:19,0:16:19.61:438,20,0	1/1:26,0:29:11.92:313,12,0	1/1:33,0:30:48.16:1252,48,0	0/1:16,0:16:0:0,0,0	0/0:36,0:37:76.14:0,76,1518	1/1:16,1:24:21.03:488,21,0	1/1:17,1:25:18.06:489,18,0	1/1:34,0:35:18.05:435,18,0	1/1:25,0:25:12.93:316,13,0	1/1:36,0:36:16.27:442,16,0	1/1:19,0:18:21.04:492,21,0	1/1:17,0:16:18.05:415,18,0	1/1:16,0:20:3.01:78,3,0	1/1:19,0:19:6.02:166,6,0	1/1:17,0:23:18.06:460,18,0	0/0:23,0:26:63.20:0,63,1219	0/0:18,0:19:37.01:0,37,753	1/1:19,0:19:6.02:152,6,0	1/1:28,0:26:24:508,24,0	1/1:13,0:15:9.03:235,9,0	./.
chr10	40518057	.	CCTT	C	7509.76	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-2.370;DP=645;FS=0.341;HRun=0;HaplotypeScore=130.4579;InbreedingCoeff=0.9829;MQ=91.39;MQ0=0;MQRankSum=-8.153;QD=42.91;ReadPosRankSum=3.310;VQSLOD=6.3787;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,117,2695	1/1:0,10:10:27.09:460,27,0	0/0:28,0:28:75.26:0,75,1697	0/0:34,0:34:92.82:0,93,2048	1/1:0,15:15:39.13:661,39,0	0/0:26,0:26:69.24:0,69,1591	0/0:26,0:26:72.25:0,72,1659	0/0:29,0:29:87.29:0,87,1915	0/0:26,0:26:69.24:0,69,1575	1/1:1,18:19:54.17:895,54,0	1/1:0,10:10:27.09:456,27,0	0/0:29,0:29:87.30:0,87,1910	0/0:20,0:20:51.17:0,51,1147	0/0:32,0:32:87.30:0,87,1986	1/1:2,29:31:78.27:1328,78,0	1/1:2,17:19:42.14:701,42,0	1/1:0,34:34:86.59:1481,87,0	1/1:0,26:25:60.21:1017,60,0	0/0:13,0:13:39.13:0,39,899	0/0:20,0:20:60.15:0,60,1331	0/0:30,0:30:81.28:0,81,1832	0/0:15,0:15:39.13:0,39,879	0/0:19,0:19:51.17:0,51,1136	0/0:28,0:28:84.29:0,84,1901	1/1:0,11:11:30.10:511,30,0	0/0:18,1:19:5.93:0,6,1081	0/0:24,0:23:69.24:0,69,1587	0/0:9,0:9:27.09:0,27,612
chr10	40518600	.	TC	T	1011.63	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=7.439;DP=395;FS=5.260;HRun=1;HaplotypeScore=60.2497;InbreedingCoeff=0.8946;MQ=82.07;MQ0=0;MQRankSum=-6.142;QD=8.16;ReadPosRankSum=-3.838;VQSLOD=-0.5300;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,0:12:18.90:146,19,0	0/0:8,0:8:21.54:0,22,334	0/0:13,0:13:36.11:0,36,535	0/0:18,0:18:40.69:0,41,448	0/0:21,0:21:51.11:0,51,757	1/1:4,0:3:3:26,3,0	1/1:9,5:14:20.81:176,21,0	1/1:13,0:13:14.97:129,15,0	1/1:10,2:12:11.64:80,12,0	0/0:18,0:18:54.17:0,54,816	0/0:10,0:10:27.09:0,27,429	0/0:27,0:27:78.25:0,78,1217	0/0:4,0:4:9:0,9,95	0/0:1,0:1:3.01:0,3,43	0/0:29,0:29:87.25:0,87,1343	0/0:14,0:14:42.14:0,42,668	0/0:35,0:35:99:0,105,1603	0/0:18,0:18:51.07:0,51,753	1/1:6,0:6:14.59:95,15,0	1/1:16,0:16:26.33:168,26,0	1/1:13,0:13:11.73:79,12,0	1/1:3,4:7:5.94:41,6,0	0/0:13,0:13:39.13:0,39,618	0/0:26,0:26:74.28:0,74,1151	0/0:16,0:16:45.09:0,45,686	1/1:11,0:11:17.80:132,18,0	1/1:13,0:13:20.23:119,20,0	1/1:3,0:3:5.85:34,6,0
chr10	40518606	.	GTGGGGT	G	2461.84	PASS	AB=0.844;AC=20;AF=0.357;AN=56;BaseQRankSum=10.892;DP=408;FS=11.154;HRun=0;HaplotypeScore=96.2118;InbreedingCoeff=0.6172;MQ=81.27;MQ0=0;MQRankSum=-4.597;QD=18.37;ReadPosRankSum=-5.614;VQSLOD=0.0064;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:13,0:14:9.07:110,0,9	0/0:8,0:8:21.54:0,22,754	0/0:18,0:18:48.60:0,49,1253	0/0:13,0:13:39.09:0,39,1168	0/0:17,0:17:48.16:0,48,1683	0/1:8,0:6:21.80:22,0,54	0/1:14,0:18:41.80:174,0,42	1/1:1,15:16:41.42:328,41,0	1/1:4,0:8:14.21:87,14,0	0/0:19,0:19:57.20:0,57,1933	0/0:10,0:10:30.10:0,30,1047	0/0:30,0:30:87.29:0,87,2929	0/0:2,0:2:6:0,6,52	0/0:3,0:3:3:0,3,54	0/0:28,0:28:84.14:0,84,2772	0/0:15,0:15:45.09:0,45,1486	0/0:37,0:37:99:0,102,3130	0/0:16,0:16:45.13:0,45,1503	1/1:0,7:7:20.99:324,21,0	1/1:0,10:13:26.99:534,27,0	1/1:0,14:14:2.82:76,3,0	0/1:2,0:5:9.96:27,0,10	0/0:15,0:15:45.15:0,45,1513	0/0:28,0:28:81.22:0,81,2628	0/0:15,0:15:45.14:0,45,1483	1/1:0,11:13:23.96:292,24,0	1/1:0,15:15:20.06:533,20,0	1/1:0,3:3:6.02:153,6,0
chr10	40518609	.	GGGT	G	1278.37	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=10.561;DP=407;FS=19.854;HRun=0;HaplotypeScore=77.5848;InbreedingCoeff=0.6933;MQ=83.69;MQ0=0;MQRankSum=-4.574;QD=9.40;ReadPosRankSum=-4.943;VQSLOD=0.0998;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:17,0:17:5.28:96,0,5	0/0:8,0:8:21.07:0,21,470	0/0:20,0:20:55.44:0,55,912	0/0:13,0:13:33.11:0,33,705	0/0:16,0:16:48.16:0,48,1065	0/1:8,0:6:25.50:74,0,26	0/1:16,0:16:14.10:143,0,14	1/1:16,0:16:18.89:144,19,0	1/1:9,0:9:16.48:161,16,0	0/0:19,0:19:57.20:0,57,1236	0/0:11,0:11:33.11:0,33,704	0/0:30,0:30:90.31:0,90,1944	0/0:2,0:2:2.94:0,3,18	0/0:4,0:4:5.97:0,6,59	0/0:30,0:30:84.25:0,84,1742	0/0:15,0:15:45.14:0,45,922	0/0:33,0:33:90.31:0,90,1955	0/0:14,0:14:42.14:0,42,920	1/1:7,0:7:17.99:153,18,0	1/1:11,2:13:24:228,24,0	1/1:14,0:14:2.67:26,3,0	1/1:5,0:5:8.42:61,8,0	0/0:15,0:15:45.15:0,45,948	0/0:27,0:27:75.26:0,75,1670	0/0:14,0:14:42.14:0,42,936	1/1:11,2:13:17.95:150,18,0	1/1:15,0:15:20.61:189,21,0	1/1:3,0:3:6:54,6,0
chr10	40518610	.	GGT	G	1326.20	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=11.227;DP=405;FS=19.734;HRun=0;HaplotypeScore=69.1861;InbreedingCoeff=0.9054;MQ=83.79;MQ0=0;MQRankSum=-4.822;QD=10.05;ReadPosRankSum=-5.993;VQSLOD=0.4921;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:16:25.61:166,26,0	0/0:8,0:8:21.07:0,21,384	0/0:20,0:20:52.88:0,53,770	0/0:13,0:13:33.11:0,33,587	0/0:16,0:16:48.16:0,48,873	1/1:7,0:5:11.85:89,12,0	1/1:12,2:14:24.35:190,24,0	1/1:16,0:16:20.46:147,20,0	1/1:7,2:9:16.94:160,17,0	0/0:19,0:19:57.19:0,57,1011	0/0:11,0:11:33.11:0,33,581	0/0:33,0:33:99:0,99,1697	0/0:2,0:2:2.80:0,3,13	0/0:4,0:4:5.97:0,6,59	0/0:29,0:29:84.21:0,84,1425	0/0:15,0:15:45.14:0,45,763	0/0:32,0:32:90.28:0,90,1597	0/0:14,0:14:42.14:0,42,750	1/1:7,0:7:17.92:137,18,0	1/1:12,1:13:23.87:192,24,0	1/1:14,0:14:2.57:20,3,0	1/1:5,0:5:11.80:88,12,0	0/0:16,0:16:48.07:0,48,803	0/0:26,0:26:75.26:0,75,1370	0/0:15,0:15:45.14:0,45,790	1/1:13,0:13:20.91:163,21,0	1/1:15,0:15:20.57:148,21,0	1/1:3,0:3:5.96:43,6,0
chr10	40518731	.	GGAGGCA	G	2548.59	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=6.948;DP=422;FS=5.272;HRun=0;HaplotypeScore=82.6396;InbreedingCoeff=0.8422;MQ=67.09;MQ0=3;MQRankSum=-6.313;QD=13.56;ReadPosRankSum=-0.738;VQSLOD=1.8558;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:15,19:31:12.04:223,12,0	0/0:10,0:10:24.03:0,24,724	0/0:25,0:17:30.02:0,30,521	0/0:15,0:13:12.04:0,12,299	0/0:17,0:17:21.07:0,21,635	1/1:9,2:10:15.03:231,15,0	1/1:3,11:14:5.97:104,6,0	1/1:9,14:22:38.13:467,38,0	1/1:2,9:10:12.04:258,12,0	0/0:12,0:12:24.07:0,24,499	0/0:10,0:10:12.04:0,12,288	0/0:15,0:15:39.13:0,39,1138	1/1:3,2:4:9.03:165,9,0	1/1:1,6:3:3.01:39,3,0	0/0:13,0:13:30.02:0,30,732	0/0:14,0:13:18.06:0,18,534	0/0:26,0:36:9.35:0,9,1334	0/0:15,0:15:33.09:0,33,969	1/1:12,3:13:3:25,3,0	1/1:7,12:19:18.02:343,18,0	1/1:13,0:13:6.02:98,6,0	1/1:1,7:8:6.02:129,6,0	0/0:8,0:8:15.05:0,15,453	0/0:28,0:28:69.22:0,69,2117	0/0:15,0:15:33.09:0,33,1030	1/1:12,3:15:21.06:363,21,0	1/1:3,4:6:15.05:283,15,0	1/1:4,2:6:3.01:33,3,0
chr10	40519323	.	G	GC	6636.26	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-11.321;DP=528;FS=4.301;HRun=7;HaplotypeScore=55.2120;InbreedingCoeff=0.9898;MQ=86.46;MQ0=1;MQRankSum=-2.021;QD=24.49;ReadPosRankSum=2.023;VQSLOD=5.4169;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,27:34:69.21:828,69,0	0/0:4,0:4:12.02:0,12,116	0/0:31,0:29:73.81:0,74,682	0/0:24,0:23:50.86:0,51,451	0/0:21,0:21:56.66:0,57,572	1/1:1,20:21:45.04:510,45,0	1/1:6,30:36:72.22:870,72,0	1/1:8,12:20:36.03:381,36,0	1/1:4,15:20:42.13:506,42,0	0/0:12,0:12:23.39:0,23,208	0/0:6,0:6:15.02:0,15,144	0/0:32,0:32:84.09:0,84,794	1/1:2,9:11:18.06:218,18,0	1/1:2,18:20:51.16:612,51,0	0/0:21,0:21:54.08:0,54,521	0/0:23,0:23:60.09:0,60,579	0/0:24,0:24:69.07:0,69,654	0/0:14,0:14:36.05:0,36,347	1/1:2,8:10:24.07:290,24,0	1/1:4,6:10:18.05:215,18,0	1/1:1,29:31:66.20:796,66,0	1/1:3,9:12:21.06:253,21,0	0/0:14,0:14:38.96:0,39,361	0/0:13,0:13:36.06:0,36,347	0/0:18,0:18:49.89:0,50,468	1/1:2,11:13:33.10:398,33,0	1/1:6,17:23:39.59:472,40,0	1/1:1,9:10:24.07:289,24,0
chr10	40519822	.	G	GT	243.38	PASS	AB=0.800;AC=8;AF=0.143;AN=56;BaseQRankSum=3.103;DP=500;FS=2.984;HRun=0;HaplotypeScore=58.8837;InbreedingCoeff=0.5926;MQ=80.42;MQ0=0;MQRankSum=-4.106;QD=6.08;ReadPosRankSum=-2.523;VQSLOD=2.9351;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:96.27:0,96,1252	1/1:4,0:4:6.28:76,6,0	0/0:21,0:21:63.03:0,63,778	0/0:23,0:23:59.99:0,60,708	0/0:9,0:9:8.88:0,9,58	0/0:21,0:21:63.19:0,63,847	0/0:25,0:25:69.23:0,69,964	0/0:28,0:28:81.22:0,81,1039	0/0:23,0:23:69.22:0,69,949	0/1:10,0:10:30.70:113,0,31	0/1:3,6:9:17.87:47,0,18	0/0:19,0:19:57.18:0,57,775	0/0:19,0:19:54.18:0,54,751	0/0:15,0:15:42.11:0,42,551	0/0:12,0:12:20.90:0,21,162	0/0:10,0:10:21.72:0,22,154	0/0:17,0:17:31.87:0,32,214	1/1:10,0:12:24.29:130,24,0	0/0:19,0:19:57.14:0,57,717	0/0:10,0:10:27.08:0,27,357	0/0:35,0:35:96.29:0,96,1292	0/0:13,0:13:39.10:0,39,499	0/0:19,0:19:54.15:0,54,712	0/0:29,0:28:87.20:0,87,1127	1/1:4,0:5:2.49:13,2,0	0/0:28,0:28:81.26:0,81,1117	0/0:17,0:17:51.14:0,51,678	0/0:16,0:16:48.16:0,48,671
chr10	40520076	.	G	GC	10823.98	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-2.550;DP=555;FS=18.354;HRun=4;HaplotypeScore=69.3482;InbreedingCoeff=0.9991;MQ=88.67;MQ0=0;MQRankSum=-7.354;QD=35.61;ReadPosRankSum=2.658;VQSLOD=3.1242;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,35:40:99:1369,102,0	0/0:7,0:7:21.06:0,21,238	0/0:20,0:20:29.07:0,29,308	0/0:24,0:24:55.89:0,56,599	0/0:24,0:24:72.17:0,72,796	1/1:1,14:15:39.13:532,39,0	1/1:2,10:12:27.09:369,27,0	1/1:2,18:20:51.14:665,51,0	1/1:0,21:21:57.19:779,57,0	0/0:20,0:20:60.17:0,60,680	0/0:15,0:15:42.12:0,42,472	0/0:13,0:13:39.08:0,39,423	1/1:1,15:16:45.15:615,45,0	1/1:1,17:18:51.17:693,51,0	0/0:25,0:25:72.19:0,72,807	0/0:18,0:18:51.15:0,51,578	0/0:18,0:18:54.14:0,54,602	0/0:14,0:14:42.03:0,42,437	1/1:1,11:12:33.11:450,33,0	1/1:2,24:26:71.85:932,72,0	1/1:1,40:41:99:1551,114,0	1/1:2,18:20:48.07:630,48,0	0/0:21,0:21:60.17:0,60,679	0/0:18,0:18:51.13:0,51,569	0/0:14,0:14:39.11:0,39,442	1/1:0,16:16:48.14:639,48,0	1/1:3,25:28:63.19:861,63,0	1/1:0,19:19:54.18:738,54,0
chr10	40522675	.	TTTTGTTTTG	T	2386.81	PASS	AB=0.980;AC=22;AF=0.393;AN=56;BaseQRankSum=-0.142;DP=479;FS=9.027;HRun=0;HaplotypeScore=148.7248;InbreedingCoeff=-0.1777;MQ=48.86;MQ0=37;MQRankSum=-0.893;QD=7.88;ReadPosRankSum=3.000;VQSLOD=2.0860;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:20,0:20:15.14:147,0,15	0/0:10,0:8:3.87:0,4,97	0/0:20,0:11:18.20:0,18,350	0/0:36,0:12:24.87:0,25,356	0/1:29,0:28:6.94:7,0,220	0/1:19,0:16:43.78:354,0,44	0/1:15,0:15:4.51:152,0,5	0/1:25,0:24:91.88:122,0,92	0/1:11,0:8:20.17:46,0,20	0/0:20,0:19:2.85:0,3,282	0/1:20,0:18:22.26:22,0,229	0/0:15,0:14:30.52:0,31,733	0/1:12,0:12:45.82:139,0,46	0/1:10,2:11:22.17:224,0,22	0/1:10,0:9:0.62:1,0,121	0/1:18,0:17:48.53:49,0,165	0/0:29,0:28:58.42:0,58,614	0/0:15,0:14:32.29:0,32,426	0/1:18,0:14:16.94:113,0,17	0/1:16,1:16:12.40:339,0,12	1/1:10,0:8:10.96:33,11,0	1/1:12,0:12:25.57:188,26,0	0/0:19,0:18:27.56:0,28,505	0/0:12,0:10:23.69:0,24,326	0/1:13,0:13:13.16:13,0,128	0/1:12,1:13:21.89:214,0,22	0/1:21,1:21:61.77:228,0,62	1/1:7,0:5:9.03:164,9,0
chr10	40522679	.	GTTTTGTTTT	G	4038.75	PASS	AB=0.907;AC=27;AF=0.482;AN=56;BaseQRankSum=-4.594;DP=497;FS=12.162;HRun=0;HaplotypeScore=145.0912;InbreedingCoeff=-0.1950;MQ=44.91;MQ0=50;MQRankSum=4.641;QD=11.00;ReadPosRankSum=4.742;VQSLOD=1.4171;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:16,0:19:50.23:175,0,50	0/1:8,0:7:37.98:38,0,133	0/1:17,0:10:2.30:2,0,169	0/0:34,0:10:9.73:0,10,129	0/1:28,0:27:70.82:71,0,374	0/1:12,0:17:11.35:375,0,11	1/1:12,0:14:0.39:303,0,0	0/1:10,13:19:16.71:246,0,17	0/1:9,0:7:32.19:102,0,32	0/1:21,0:20:52.70:53,0,290	0/1:25,0:21:71.91:72,0,309	0/0:17,0:16:41.76:0,42,836	0/1:16,0:15:55.27:184,0,55	0/1:13,0:12:39.45:282,0,39	0/1:8,0:8:4.81:5,0,157	0/1:19,0:17:21.90:22,0,282	0/0:31,0:28:49.77:0,50,707	0/0:16,0:13:34.96:0,35,402	1/1:18,0:13:19.61:307,20,0	1/1:15,1:15:12.96:408,13,0	1/1:11,0:9:20.91:185,21,0	0/1:12,0:14:33.08:187,0,33	0/0:17,0:16:47.67:0,48,652	0/0:14,0:11:21:0,21,319	0/1:17,0:16:95.74:96,0,188	0/1:6,7:14:23.19:319,0,23	0/1:23,0:21:2.30:392,0,2	1/1:3,3:5:9.03:215,9,0
chr10	40522680	.	TTTTG	T	4772.55	PASS	AB=0.978;AC=38;AF=0.679;AN=56;BaseQRankSum=-1.235;DP=510;FS=0.000;HRun=0;HaplotypeScore=106.3354;InbreedingCoeff=0.1746;MQ=44.17;MQ0=55;MQRankSum=2.202;QD=11.20;ReadPosRankSum=4.256;VQSLOD=4.0638;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:19:15.85:205,16,0	1/1:10,0:7:2.23:102,2,0	0/1:18,0:10:15.65:16,0,122	0/0:35,0:10:9.46:0,9,104	1/1:25,2:26:36.69:393,37,0	0/1:21,0:18:5.45:164,0,5	0/1:16,0:15:5.81:195,0,6	1/1:23,0:19:31.42:200,31,0	0/1:11,0:8:11.16:72,0,11	0/1:22,1:21:13.08:192,0,13	1/1:26,1:23:30.71:308,31,0	0/0:17,0:16:25.90:0,26,349	0/1:18,0:17:27.61:109,0,28	0/1:13,0:12:12.79:151,0,13	1/1:9,0:8:20.79:178,21,0	1/1:20,0:18:6.52:237,7,0	0/1:28,2:26:5.25:302,0,5	0/1:14,2:13:11.56:166,0,12	1/1:19,0:14:8.06:214,8,0	1/1:18,0:15:28.08:283,28,0	1/1:11,0:9:20.77:163,21,0	1/1:14,0:14:30.16:249,30,0	0/0:18,0:17:23.15:0,23,225	0/0:14,0:11:20.24:0,20,135	1/1:16,1:16:37.31:301,37,0	0/1:14,0:14:12.43:191,0,12	1/1:23,0:21:13.13:271,13,0	1/1:9,0:5:9.01:111,9,0
chr10	40522681	.	TTTG	T	4716.71	PASS	AB=0.989;AC=36;AF=0.643;AN=56;BaseQRankSum=-1.529;DP=516;FS=4.277;HRun=0;HaplotypeScore=98.6960;InbreedingCoeff=-0.0525;MQ=43.54;MQ0=56;MQRankSum=2.352;QD=10.48;ReadPosRankSum=3.240;VQSLOD=4.3790;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:20:28.26:245,28,0	0/1:9,1:7:0.45:126,0,0	0/1:18,0:10:15.45:15,0,110	0/0:34,0:9:9.55:0,10,104	1/1:28,0:27:35.30:388,35,0	0/1:21,0:18:8.32:138,0,8	1/1:16,0:15:4.03:190,4,0	1/1:23,0:19:18.53:151,19,0	0/1:11,0:8:16.56:66,0,17	0/1:22,0:20:16.85:222,0,17	1/1:26,1:23:34.60:409,35,0	0/0:17,0:16:12.30:0,12,294	0/1:18,0:17:48.21:90,0,48	0/1:13,0:12:31.61:134,0,32	1/1:9,1:8:17.12:140,17,0	0/1:20,0:18:0.85:268,0,1	0/1:29,2:26:35.50:315,0,35	0/1:16,0:13:10.07:175,0,10	0/1:21,0:15:10.86:187,0,11	1/1:19,0:16:8.45:215,8,0	1/1:12,0:9:17.83:150,18,0	1/1:14,0:14:29.98:250,30,0	0/1:19,0:17:23.79:24,0,159	0/0:15,0:11:20.74:0,21,150	1/1:14,2:15:38.26:346,38,0	0/1:14,0:14:32.73:173,0,33	0/1:22,0:20:4.59:211,0,5	1/1:9,0:5:8.92:91,9,0
chr10	40522683	.	TG	T	4575.18	PASS	AB=0.993;AC=39;AF=0.696;AN=56;BaseQRankSum=-0.403;DP=521;FS=23.799;HRun=1;HaplotypeScore=83.5988;InbreedingCoeff=0.0055;MQ=41.68;MQ0=76;MQRankSum=0.500;QD=9.97;ReadPosRankSum=2.877;VQSLOD=1.2812;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:20:11.20:191,11,0	0/1:11,0:7:11.36:90,0,11	0/1:17,0:9:15.44:15,0,85	0/0:31,0:7:12.75:0,13,113	1/1:30,0:27:48.94:438,49,0	0/1:19,1:17:2.64:137,0,3	1/1:16,0:15:41.80:281,42,0	0/1:23,0:18:16.84:145,0,17	1/1:11,1:8:21.30:126,21,0	0/1:21,0:19:18.39:209,0,18	1/1:27,0:23:45.75:417,46,0	0/0:17,0:16:3.49:0,3,163	0/1:18,0:17:16.22:110,0,16	0/1:13,0:12:30.42:118,0,30	1/1:10,0:7:7.31:75,7,0	1/1:18,2:18:21.65:217,22,0	0/1:32,1:25:50.40:235,0,50	0/1:16,0:13:8.50:165,0,8	1/1:22,0:14:1.44:205,1,0	1/1:21,0:16:20.23:211,20,0	1/1:13,0:9:3.41:133,3,0	1/1:13,1:14:32.06:202,32,0	0/1:21,0:17:96.95:110,0,97	0/0:14,0:9:22.58:0,23,166	1/1:15,2:15:28.58:265,29,0	0/1:14,0:13:50.88:146,0,51	1/1:20,0:18:33.97:273,34,0	1/1:9,0:5:8.73:60,9,0
chr10	40524908	.	AT	A	3723.89	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=7.217;DP=543;FS=0.754;HRun=10;HaplotypeScore=63.6216;InbreedingCoeff=0.9436;MQ=72.76;MQ0=0;MQRankSum=-2.896;QD=20.80;ReadPosRankSum=-0.865;VQSLOD=4.1990;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,1:28:35.28:0,35,580	0/0:10,0:10:27.07:0,27,299	0/0:12,0:14:7.84:0,8,96	0/0:9,0:9:17.72:0,18,161	0/0:27,0:27:69.17:0,69,752	0/0:17,0:17:45.12:0,45,498	0/0:18,0:19:53.98:0,54,578	1/1:3,26:29:77.97:677,78,0	0/0:15,0:15:36.09:0,36,391	0/0:19,0:19:48.12:0,48,525	0/0:18,0:18:51.14:0,51,564	0/0:15,0:15:30.07:0,30,323	0/0:16,0:16:36.09:0,36,396	0/0:12,0:12:30.04:0,30,319	0/0:14,1:15:13.09:0,13,352	0/0:20,0:20:51.11:0,51,552	0/0:15,0:15:33.02:0,33,349	0/0:18,0:18:47.93:0,48,492	1/1:7,21:28:62.97:547,63,0	1/1:5,30:35:89.97:781,90,0	1/1:2,18:20:47.98:417,48,0	0/0:12,0:13:38.89:0,39,392	0/0:22,1:23:40.12:0,40,671	0/0:20,1:21:2.05:0,2,469	0/0:17,1:18:18.90:0,19,420	1/1:2,26:28:71.98:625,72,0	1/1:0,20:20:50.99:443,51,0	1/1:6,13:19:26.99:234,27,0
chr10	40524972	.	A	ATG	3745.98	PASS	AB=0.643;AC=20;AF=0.357;AN=56;BaseQRankSum=-2.004;DP=587;FS=3.585;HRun=0;HaplotypeScore=154.9820;InbreedingCoeff=0.6558;MQ=57.40;MQ0=18;MQRankSum=1.216;QD=14.92;ReadPosRankSum=0.366;VQSLOD=3.7525;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,15:28:20.18:494,20,0	1/1:4,2:5:6.02:94,6,0	0/0:22,0:11:8.31:0,8,100	0/0:33,0:19:16.52:0,17,204	0/0:7,0:21:5.80:0,6,33	0/0:21,1:22:40.44:0,40,420	0/0:20,0:20:29.90:0,30,310	0/0:28,0:28:30.08:0,30,343	0/0:22,0:22:39.50:0,40,529	1/1:13,9:20:39.13:582,39,0	0/1:18,7:24:10.93:281,0,11	1/1:5,0:19:15.93:142,16,0	1/1:15,0:21:18.76:170,19,0	1/1:14,0:22:26.99:237,27,0	0/0:6,0:20:36.93:0,37,182	0/0:7,0:21:33.07:0,33,158	0/0:3,0:8:14.20:0,14,70	1/1:20,4:21:34.67:519,35,0	0/0:15,0:14:15.51:0,16,168	0/0:24,0:24:24.07:0,24,280	0/0:10,0:11:18.05:0,18,209	0/1:9,17:24:7.76:347,0,8	0/1:5,10:16:3.72:259,0,4	0/1:7,15:21:19.67:344,0,20	1/1:14,3:15:18.04:276,18,0	0/0:20,0:21:2.92:0,3,367	0/0:25,0:25:45.13:0,45,515	0/0:19,0:19:32.78:0,33,363
chr10	40525003	.	CGA	C	2502.64	PASS	AB=0.956;AC=25;AF=0.446;AN=56;BaseQRankSum=5.250;DP=596;FS=16.607;HRun=0;HaplotypeScore=159.4170;InbreedingCoeff=0.4454;MQ=51.00;MQ0=21;MQRankSum=-3.721;QD=8.48;ReadPosRankSum=3.882;VQSLOD=2.3198;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:23.46:0,23,265	1/1:4,0:4:3.01:36,3,0	0/0:42,0:10:14.64:0,15,149	0/0:36,0:14:6.04:0,6,59	1/1:3,19:23:27.07:323,27,0	0/1:20,1:21:56.66:57,0,388	0/0:17,0:15:8.48:0,8,312	0/1:19,0:21:35.14:35,0,83	0/0:27,1:28:21.84:0,22,957	1/1:8,4:12:21.52:231,22,0	1/1:14,3:14:6.34:55,6,0	0/0:19,0:19:24.51:0,25,340	0/0:18,0:17:11.72:0,12,232	0/1:17,2:19:11.58:12,0,213	1/1:1,15:18:44.87:484,45,0	1/1:3,19:22:39.08:451,39,0	1/1:0,13:13:27.08:322,27,0	1/1:15,7:19:36.41:456,36,0	0/0:18,0:17:26.78:0,27,237	0/0:14,0:15:14.47:0,14,102	0/1:11,0:11:20.45:20,0,33	0/0:24,0:23:20.04:0,20,185	0/0:20,1:19:29.87:0,30,417	0/1:20,2:21:35.77:36,0,439	1/1:11,6:14:17.82:157,18,0	0/1:13,1:21:2.88:3,0,165	0/1:23,0:26:24.91:25,0,230	0/0:13,0:18:14.58:0,15,148
chr10	40525031	.	GGA	G	374.30	PASS	AB=0.545;AC=3;AF=0.054;AN=56;BaseQRankSum=1.366;DP=555;FS=0.000;HRun=0;HaplotypeScore=145.8309;InbreedingCoeff=0.6176;MQ=51.01;MQ0=12;MQRankSum=2.332;QD=10.12;ReadPosRankSum=1.797;VQSLOD=2.9972;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:34:68.41:0,68,990	0/0:4,0:4:1.25:0,1,3	0/0:16,0:6:5.97:0,6,47	0/0:19,1:6:4.37:0,4,53	0/0:28,0:26:45.14:0,45,622	0/0:19,1:19:9.43:0,9,457	0/0:19,0:18:42.07:0,42,638	0/0:34,0:34:80.97:0,81,1072	0/0:28,0:28:53.16:0,53,849	0/0:17,0:17:34.90:0,35,462	0/0:14,0:11:7.45:0,7,255	0/0:21,0:21:36.05:0,36,554	0/1:3,15:18:0.33:212,0,0	1/1:5,14:19:23.99:267,24,0	0/0:23,0:23:48.11:0,48,669	0/0:21,0:20:42.14:0,42,600	0/0:21,0:21:45.05:0,45,641	0/0:19,0:19:32.90:0,33,450	0/0:18,1:15:6.83:0,7,402	0/0:15,0:14:27.08:0,27,422	0/0:14,0:14:27.08:0,27,415	0/0:17,0:17:17.07:0,17,228	0/0:16,0:15:27.05:0,27,390	0/0:25,0:25:51.02:0,51,726	0/0:18,0:17:23.07:0,23,281	0/0:19,0:19:34.26:0,34,536	0/0:20,0:20:37:0,37,565	0/0:14,0:12:20.98:0,21,286
chr10	40526402	.	GCACACA	G	3167.94	PASS	AB=0.850;AC=28;AF=0.519;AN=54;BaseQRankSum=0.009;DP=445;FS=3.186;HRun=0;HaplotypeScore=129.0880;InbreedingCoeff=0.1042;MQ=53.20;MQ0=20;MQRankSum=-0.015;QD=10.46;ReadPosRankSum=7.498;VQSLOD=1.9901;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:11.89:0,12,81	0/1:4,1:5:5.28:85,0,5	0/0:16,0:3:9.03:0,9,110	0/0:8,0:6:5.06:0,5,66	1/1:4,19:23:2.37:8,2,0	0/0:17,0:17:5.41:0,5,49	1/1:12,0:11:3.81:27,4,0	0/1:18,0:17:2.63:3,0,6	0/1:2,0:14:17.89:31,0,18	1/1:3,18:20:37.83:598,38,0	./.	0/0:26,0:26:8.94:0,9,73	0/1:3,0:11:35.79:62,0,36	0/1:3,0:10:29.97:106,0,30	1/1:4,0:4:6.02:89,6,0	1/1:6,2:8:8.50:79,9,0	1/1:24,3:27:54.32:903,54,0	1/1:20,2:22:34.22:690,34,0	0/1:14,0:12:21.30:108,0,21	0/0:9,0:9:2.73:0,3,43	0/1:31,0:27:18.43:18,0,63	0/0:14,0:12:3.97:0,4,46	0/0:9,0:8:5.77:0,6,39	0/1:29,0:28:28.48:61,0,28	1/1:16,1:16:27.04:389,27,0	0/1:14,0:12:21.65:25,0,22	1/1:14,0:13:4.65:21,5,0	0/1:6,0:5:37.80:38,0,42
chr10	40526404	.	ACACACG	A	4839.10	PASS	AB=1.000;AC=47;AF=0.870;AN=54;BaseQRankSum=-4.115;DP=443;FS=18.945;HRun=0;HaplotypeScore=123.4982;InbreedingCoeff=0.0743;MQ=52.85;MQ0=20;MQRankSum=1.254;QD=11.92;ReadPosRankSum=7.586;VQSLOD=1.2320;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:32,0:31:10.50:324,11,0	0/1:5,0:5:20.87:51,0,21	./.	0/1:8,0:6:12.03:48,0,12	0/0:22,0:22:2.74:0,3,12	1/1:17,0:17:26.96:222,27,0	1/1:13,0:12:20.98:190,21,0	1/1:18,0:17:50.05:366,50,0	1/1:13,0:13:3.01:49,3,0	1/1:21,0:20:35.42:316,35,0	0/1:13,0:13:0:0,0,0	1/1:3,22:25:5.80:38,6,0	1/1:10,0:9:6.02:96,6,0	1/1:10,0:10:11.53:153,12,0	1/1:4,0:4:5.99:50,6,0	0/1:8,0:8:6.46:19,0,6	1/1:29,0:29:0.22:433,0,0	1/1:22,0:21:28.87:377,29,0	1/1:2,12:12:32.28:341,32,0	1/1:9,0:9:2.96:19,3,0	1/1:32,0:28:34.23:367,34,0	1/1:14,0:12:17.98:149,18,0	0/1:10,0:9:19.61:27,0,20	1/1:29,0:27:39.21:403,39,0	1/1:16,0:15:20.99:186,21,0	1/1:14,0:12:32.63:265,33,0	1/1:14,0:13:35.89:285,36,0	1/1:6,0:5:1.55:66,2,0
chr10	40526408	.	ACG	A	3854.01	PASS	AB=1.000;AC=37;AF=0.685;AN=54;BaseQRankSum=-4.377;DP=458;FS=41.418;HRun=0;HaplotypeScore=111.5485;InbreedingCoeff=-0.1866;MQ=51.42;MQ0=23;MQRankSum=1.310;QD=9.49;ReadPosRankSum=8.092;VQSLOD=0.8943;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:32,0:30:70.29:311,0,70	0/1:7,0:7:20.76:21,0,66	./.	0/1:7,0:5:5.99:51,0,6	0/0:22,0:22:3.01:0,3,44	1/1:15,0:15:26.96:222,27,0	1/1:16,0:15:20.81:161,21,0	1/1:20,0:19:34.75:374,35,0	1/1:13,0:13:2.98:21,3,0	0/1:21,0:20:0.63:295,0,1	0/0:17,0:17:5.79:0,6,42	1/1:24,0:24:5.91:38,6,0	1/1:10,0:9:5.93:40,6,0	0/1:11,0:11:6.42:48,0,6	1/1:4,0:4:5.99:50,6,0	0/1:10,0:10:18.94:19,0,39	0/1:30,0:30:53.97:308,0,54	0/1:25,0:24:71.14:266,0,71	1/1:16,0:14:25.80:202,26,0	1/1:1,6:7:2.96:19,3,0	0/1:29,0:24:12.85:281,0,13	0/1:13,0:11:3.01:128,0,3	0/1:11,0:10:20.96:21,0,53	0/1:35,0:33:52.83:296,0,53	1/1:16,0:14:6.58:135,7,0	1/1:14,0:12:33.39:276,33,0	1/1:14,0:13:29.32:256,29,0	0/1:6,0:5:15.88:16,0,24
chr10	40526410	.	GCA	G	174.56	PASS	AB=0.959;AC=17;AF=0.386;AN=44;BaseQRankSum=3.852;DP=474;FS=8.196;HRun=0;HaplotypeScore=126.8570;InbreedingCoeff=0.1425;MQ=50.57;MQ0=25;MQRankSum=-2.279;QD=0.79;ReadPosRankSum=3.385;VQSLOD=1.9511;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:37,0:35:5.38:5,0,164	0/1:6,1:7:3.69:4,0,36	./.	./.	0/0:23,0:23:2.99:0,3,24	./.	1/1:10,0:16:2.74:12,3,0	0/0:23,0:21:11.79:0,12,85	1/1:12,1:13:2.84:14,3,0	0/0:22,0:21:4.23:0,4,25	./.	0/0:26,0:26:4.82:0,5,40	1/1:10,0:9:5.68:28,6,0	0/1:9,0:9:1.46:31,0,1	./.	0/0:8,2:10:2.99:0,3,24	0/1:27,3:30:7.16:76,0,7	0/1:25,2:26:65.32:65,0,88	0/1:17,0:15:0.13:16,0,0	./.	0/0:31,0:27:9.35:0,9,89	1/1:13,0:11:0.47:1,0,0	0/0:10,0:10:3.01:0,3,43	1/1:35,0:33:8.79:40,9,0	0/0:14,1:13:2.92:0,3,17	0/0:16,0:14:0.89:0,1,2	0/0:14,0:13:2.84:0,3,14	0/1:4,0:3:5.85:6,0,33
chr10	40527040	.	AT	A	531.25	PASS	AB=0.854;AC=8;AF=0.143;AN=56;BaseQRankSum=7.946;DP=553;FS=3.599;HRun=11;HaplotypeScore=60.1574;InbreedingCoeff=0.4273;MQ=66.79;MQ0=0;MQRankSum=-0.136;QD=5.37;ReadPosRankSum=2.124;VQSLOD=1.4678;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:31:65.99:0,66,678	0/0:12,0:12:21.05:0,21,224	0/0:6,0:6:6.02:0,6,64	0/0:10,0:8:15.66:0,16,113	0/0:19,1:20:11.45:0,11,327	0/1:14,2:16:4.21:4,0,359	0/0:18,0:18:48.11:0,48,505	0/0:28,1:29:35.32:0,35,554	0/0:15,1:16:17.46:0,17,391	0/0:21,0:22:38.25:0,38,442	0/0:18,1:19:51.13:0,51,543	0/0:22,0:22:45.10:0,45,472	1/1:3,9:12:29.95:246,30,0	1/1:1,15:17:46.97:375,47,0	0/0:24,1:25:32.48:0,32,543	0/0:22,0:22:57.14:0,57,608	0/1:28,3:32:5.60:6,0,597	0/0:26,2:29:10.70:0,11,509	0/1:14,2:16:7.19:7,0,334	0/0:22,1:23:26.48:0,26,487	0/0:14,1:15:8.44:0,8,295	0/0:19,0:20:50.96:0,51,526	0/0:19,0:19:54.14:0,54,576	0/0:21,0:21:51.10:0,51,533	0/0:21,0:21:48.06:0,48,484	0/0:25,0:26:65.94:0,66,662	0/0:26,1:28:56.37:0,56,776	0/1:4,2:6:31.24:31,0,110
chr10	40527117	.	ATGTGTGTGTG	A	6024.48	PASS	AB=0.667;AC=19;AF=0.339;AN=56;BaseQRankSum=3.272;DP=513;FS=0.000;HRun=0;HaplotypeScore=171.2089;InbreedingCoeff=0.7929;MQ=53.95;MQ0=7;MQRankSum=-8.662;QD=36.51;ReadPosRankSum=2.670;VQSLOD=4.0729;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:23:15.05:0,15,562	1/1:3,0:4:3.01:70,3,0	0/0:16,0:10:1.25:0,1,3	0/0:9,0:3:3.01:0,3,86	1/1:11,15:26:30.06:830,30,0	0/0:11,0:16:30.03:0,30,1035	0/0:17,0:26:21.54:0,22,872	0/0:25,0:24:33.11:0,33,1230	0/0:10,0:17:24.08:0,24,1012	1/1:7,12:22:45.11:1136,45,0	1/1:5,9:15:12.04:360,12,0	0/0:19,0:22:42.14:0,42,1851	0/0:10,0:16:38.72:0,39,725	0/1:6,0:12:20.27:20,0,319	1/1:3,8:12:21.07:610,21,0	1/1:6,12:19:36.12:1060,36,0	1/1:19,6:27:24.08:680,24,0	1/1:9,3:12:9.02:270,9,0	0/0:21,0:22:36.11:0,36,1304	0/0:14,0:24:38.70:0,39,1310	0/0:8,0:11:12.04:0,12,511	0/0:24,0:23:6.49:0,6,282	0/0:20,0:22:39.13:0,39,1660	0/0:20,0:20:39.13:0,39,1602	1/1:3,13:16:33.11:990,33,0	0/0:16,0:30:69.24:0,69,2905	0/0:11,0:19:21.05:0,21,786	0/0:4,0:4:6.02:0,6,244
chr10	40530462	.	G	GTATTTATT	3420.85	PASS	AC=38;AF=0.864;AN=44;BaseQRankSum=3.545;DP=263;FS=8.428;HRun=0;HaplotypeScore=66.1058;InbreedingCoeff=0.3608;MQ=74.52;MQ0=0;MQRankSum=-4.282;QD=18.69;ReadPosRankSum=-3.146;VQSLOD=0.4107;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:24.08:0,24,587	1/1:3,0:3:3.01:66,3,0	./.	./.	1/1:10,0:12:6.02:179,6,0	1/1:4,2:6:9.03:364,9,0	1/1:6,0:6:3.01:51,3,0	1/1:28,0:28:21.07:440,21,0	1/1:3,0:4:2.99:24,3,0	1/1:9,0:9:3.01:122,3,0	1/1:7,0:8:7.84:152,8,0	./.	1/1:4,0:4:3.01:70,3,0	1/1:5,0:6:2.99:24,3,0	1/1:9,3:12:3.01:122,3,0	1/1:2,1:3:3.01:122,3,0	1/1:22,0:22:18.06:489,18,0	1/1:11,0:11:3.01:65,3,0	./.	1/1:3,1:5:9.03:266,9,0	./.	./.	0/0:7,0:7:3.01:0,3,74	0/0:5,0:5:6.02:0,6,148	1/1:8,3:12:9.03:365,9,0	1/1:8,0:8:4.25:30,4,0	1/1:7,0:7:3.01:103,3,0	1/1:17,0:17:15.05:366,15,0
chr10	40530645	.	TTTG	T	2204.25	PASS	AC=20;AF=0.435;AN=46;BaseQRankSum=0.639;DP=134;FS=6.652;HRun=0;HaplotypeScore=41.3682;InbreedingCoeff=0.6879;MQ=79.90;MQ0=0;MQRankSum=-4.317;QD=36.74;ReadPosRankSum=0.543;VQSLOD=3.6222;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,3:4:9.03:144,9,0	0/0:4,0:4:9.03:0,9,198	0/0:6,0:4:9.03:0,9,198	0/0:11,0:9:9.33:0,9,340	0/0:2,0:2:6.02:0,6,126	./.	1/1:1,1:2:3.01:48,3,0	1/1:9,18:27:75.26:1197,75,0	1/1:1,1:2:3.01:48,3,0	0/0:1,0:0:3.01:0,3,66	0/0:3,0:3:9.03:0,9,179	./.	0/0:3,0:3:9.03:0,9,198	0/0:2,0:2:6.02:0,6,131	0/0:2,0:2:6.02:0,6,132	./.	0/0:22,0:22:30.10:0,30,617	0/0:10,0:10:7.27:0,7,126	1/1:3,4:7:12.03:169,12,0	1/1:1,2:3:6.02:96,6,0	1/1:0,4:4:12.04:191,12,0	./.	./.	0/0:1,0:1:2.97:0,3,20	0/0:6,0:6:18.06:0,18,348	1/1:0,1:1:3.01:48,3,0	1/1:1,2:3:9.03:144,9,0	1/1:0,7:7:18.06:288,18,0
chr10	40530657	.	ATTTTT	A	2197.77	PASS	AB=0.692;AC=31;AF=0.646;AN=48;BaseQRankSum=0.194;DP=122;FS=11.482;HRun=8;HaplotypeScore=40.0344;InbreedingCoeff=0.3784;MQ=57.73;MQ0=4;MQRankSum=-4.189;QD=26.16;ReadPosRankSum=0.294;VQSLOD=-0.2328;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,0:5:13.59:177,14,0	1/1:3,0:3:5.27:21,5,0	0/0:9,0:2:3.01:0,3,71	0/0:8,0:6:15.02:0,15,273	1/1:2,0:2:5.29:22,5,0	1/1:0,1:1:3.01:50,3,0	./.	1/1:3,19:21:57.19:1023,57,0	1/1:0,1:1:3.01:52,3,0	./.	1/1:2,0:4:10.87:73,11,0	0/0:2,0:2:0:0,0,0	0/0:3,0:3:8.95:0,9,124	0/0:2,0:2:5.99:0,6,74	0/1:2,0:2:3.29:3,0,59	./.	0/1:5,0:19:36.31:36,0,101	0/0:2,0:11:7.42:0,7,42	1/1:2,1:3:9:128,9,0	1/1:0,2:2:6.02:100,6,0	1/1:0,4:4:9.03:137,9,0	1/1:1,0:1:3.01:60,3,0	0/0:1,0:1:0:0,0,0	./.	0/1:0,0:6:18.31:86,0,18	1/1:0,1:1:3.01:59,3,0	1/1:1,1:2:3.01:56,3,0	1/1:1,5:6:15.05:262,15,0
chr10	40530663	.	T	TA	1778.23	PASS	AB=0.833;AC=34;AF=0.680;AN=50;BaseQRankSum=-0.059;DP=116;FS=2.709;HRun=0;HaplotypeScore=35.2727;InbreedingCoeff=0.3270;MQ=48.92;MQ0=4;MQRankSum=-0.998;QD=18.92;ReadPosRankSum=2.347;VQSLOD=5.5853;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,0:5:14.96:160,15,0	1/1:0,3:3:6.02:72,6,0	0/0:9,0:2:2.77:0,3,41	0/0:6,0:4:12.01:0,12,145	1/1:0,2:2:6.02:72,6,0	1/1:2,0:2:5.91:51,6,0	./.	1/1:21,0:20:57.63:642,58,0	1/1:1,0:1:3.01:34,3,0	0/0:1,0:1:2.98:0,3,21	1/1:2,2:4:11.21:91,11,0	0/0:0,0:2:0:0,0,0	1/1:1,0:3:0.92:42,1,0	0/1:1,0:2:5.60:19,0,6	1/1:0,2:2:6.02:80,6,0	./.	1/1:16,2:18:0.43:118,0,0	0/1:10,0:10:12.32:37,0,12	1/1:2,0:2:6.02:67,6,0	1/1:2,0:2:6.02:69,6,0	1/1:4,0:3:8.94:85,9,0	0/0:1,0:1:1.55:0,2,4	0/0:0,0:1:0:0,0,0	./.	1/1:7,0:7:16.43:112,16,0	1/1:1,0:1:2.98:21,3,0	0/0:2,0:2:0.70:0,1,2	1/1:5,0:5:8.65:131,9,0
chr10	40530704	.	TATTATC	T	2395.97	PASS	AB=1.000;AC=37;AF=0.712;AN=52;BaseQRankSum=-0.247;DP=154;FS=20.180;HRun=0;HaplotypeScore=46.6010;InbreedingCoeff=0.2900;MQ=70.68;MQ0=2;MQRankSum=-1.332;QD=18.57;ReadPosRankSum=1.397;VQSLOD=1.2689;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:7,0:7:7.45:51,0,7	1/1:1,0:1:3:27,3,0	0/0:8,0:8:13.73:0,14,143	0/0:5,0:4:11.99:0,12,104	1/1:7,0:7:21.01:189,21,0	1/1:7,0:7:15.47:146,15,0	1/1:1,0:1:3:25,3,0	1/1:26,0:24:50.91:476,51,0	1/1:2,0:2:2.99:24,3,0	1/1:4,0:4:12.02:153,12,0	1/1:1,2:3:9.02:153,9,0	0/1:4,0:4:12.82:13,0,37	0/1:3,0:3:15.96:16,0,95	0/1:2,0:2:21.96:22,0,44	0/0:1,0:1:3.01:0,3,50	1/1:1,0:1:3:25,3,0	0/1:20,0:20:31.47:242,0,31	1/1:9,2:11:20.92:170,21,0	./.	1/1:2,0:2:6:52,6,0	./.	1/1:2,0:2:5.97:48,6,0	0/0:5,0:5:1.57:0,2,86	0/0:4,0:4:11.97:0,12,96	1/1:6,3:9:18.05:322,18,0	1/1:2,0:2:3.89:28,4,0	1/1:7,0:7:19.57:196,20,0	1/1:8,0:8:17.95:180,18,0
chr10	40531649	.	AACACACACAC	A	754.61	PASS	AB=0.749;AC=12;AF=0.231;AN=52;BaseQRankSum=4.310;DP=450;FS=7.106;HRun=0;HaplotypeScore=124.9539;InbreedingCoeff=0.2781;MQ=59.34;MQ0=11;MQRankSum=-4.441;QD=5.90;ReadPosRankSum=-0.407;VQSLOD=1.3282;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:31:9.50:0,10,126	0/1:4,0:7:4.82:64,0,5	./.	./.	1/1:8,7:15:14.97:237,15,0	0/0:11,0:13:12.04:0,12,238	0/0:17,0:16:30.10:0,30,654	0/0:24,0:24:22.62:0,23,278	0/0:13,0:17:6.02:0,6,136	0/1:9,0:16:21.80:129,0,22	1/1:10,0:14:9.47:161,9,0	0/0:14,0:13:9.03:0,9,387	0/0:6,0:5:12.04:0,12,454	0/0:8,0:12:12.04:0,12,553	1/1:7,2:9:3.01:89,3,0	0/0:9,0:9:3.01:0,3,96	0/1:15,9:24:4.71:91,0,5	0/1:15,0:15:21.73:22,0,26	0/0:10,0:10:9.02:0,9,131	0/0:23,0:22:30.09:0,30,481	0/0:16,0:19:15.05:0,15,241	0/1:10,0:15:14.94:50,0,15	0/0:11,0:10:12.02:0,12,259	0/0:21,0:21:33.11:0,33,1317	0/1:5,0:13:39.22:64,0,39	0/0:19,0:19:24.08:0,24,366	0/0:12,0:12:12.04:0,12,189	0/0:7,0:9:14.84:0,15,235
chr10	40533922	.	G	GCATCA	564.23	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=6.795;DP=391;FS=13.093;HRun=0;HaplotypeScore=84.8776;InbreedingCoeff=0.2516;MQ=65.98;MQ0=9;MQRankSum=-6.782;QD=5.53;ReadPosRankSum=1.746;VQSLOD=0.9289;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:36.12:0,36,669	0/1:4,0:4:5.85:6,0,14	0/0:11,0:11:21.07:0,21,431	0/0:40,0:20:43.69:0,44,696	0/1:20,0:20:31.76:32,0,42	0/0:12,0:12:23.95:0,24,375	0/0:13,0:11:30.10:0,30,596	0/0:26,0:25:63.22:0,63,1306	0/0:16,0:16:42.14:0,42,749	0/1:17,0:16:99:216,0,185	0/1:11,0:11:9.25:26,0,9	0/0:19,0:19:51.17:0,51,868	1/1:0,4:4:3.01:91,3,0	1/1:4,7:11:9.03:232,9,0	1/1:6,0:6:9.43:33,9,0	0/1:8,0:8:5.80:6,0,14	0/0:9,0:8:6.41:0,6,41	0/1:7,0:6:41.36:48,0,41	0/0:13,0:11:33.11:0,33,627	0/0:18,0:18:42.09:0,42,870	0/0:23,0:23:60.20:0,60,1168	0/0:5,0:5:12.04:0,12,238	0/0:13,0:13:15.05:0,15,288	0/0:13,0:13:35.90:0,36,691	0/1:14,0:14:29.58:30,0,51	0/0:13,0:13:36.11:0,36,689	0/0:16,0:15:30.10:0,30,617	0/0:15,0:14:42.14:0,42,871
chr10	40533930	.	C	CA	819.67	PASS	AB=0.792;AC=17;AF=0.304;AN=56;BaseQRankSum=6.470;DP=438;FS=6.366;HRun=0;HaplotypeScore=78.2873;InbreedingCoeff=0.5879;MQ=53.21;MQ0=24;MQRankSum=-6.393;QD=6.61;ReadPosRankSum=-1.078;VQSLOD=2.4976;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:14:30.10:0,30,414	1/1:3,2:5:2.80:35,3,0	0/0:7,0:7:21.07:0,21,286	0/0:37,0:17:36.53:0,37,451	1/1:11,16:26:18.04:192,18,0	0/0:10,0:10:9.50:0,10,124	0/0:21,0:19:28.02:0,28,354	0/0:31,0:30:73.06:0,73,928	0/0:18,0:18:27.49:0,27,336	0/1:13,9:20:99:318,0,165	1/1:4,9:13:9.03:110,9,0	0/0:19,0:19:27.09:0,27,364	1/1:5,0:4:1.82:5,2,0	0/1:15,0:14:9.08:38,0,9	1/1:6,5:11:12.04:149,12,0	1/1:2,7:8:2.81:35,3,0	0/0:5,6:10:3.90:0,4,24	0/1:3,3:4:4.12:85,0,4	0/0:18,0:15:38.09:0,38,454	0/0:24,0:24:42.13:0,42,577	0/0:25,0:23:48.16:0,48,662	0/0:5,0:3:9.03:0,9,124	0/0:12,0:12:12.04:0,12,165	0/0:13,0:13:30.06:0,30,380	1/1:2,0:10:2.99:23,3,0	0/0:15,0:15:35.17:0,35,406	0/0:15,0:14:33.06:0,33,429	0/0:18,0:14:42.14:0,42,580
chr10	40534194	.	ATGTGTG	A	634.76	PASS	AB=1.000;AC=17;AF=0.531;AN=32;BaseQRankSum=-2.238;DP=322;FS=5.643;HRun=0;HaplotypeScore=62.5311;InbreedingCoeff=0.2529;MQ=40.77;MQ0=119;MQRankSum=2.305;QD=6.05;ReadPosRankSum=3.708;VQSLOD=0.8664;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:11:6.02:113,6,0	./.	./.	./.	./.	1/1:10,0:8:1.82:5,2,0	0/0:11,0:6:3.01:0,3,32	./.	./.	./.	1/1:4,0:2:3.01:56,3,0	0/0:12,0:8:0:0,0,0	1/1:2,0:4:3.01:48,3,0	0/0:6,0:5:0.47:0,0,1	1/1:13,0:13:3.48:42,3,0	./.	0/0:18,0:13:2.82:0,3,51	1/1:24,0:17:3.43:380,3,0	0/0:12,0:4:3.01:0,3,53	./.	./.	./.	0/0:4,0:3:3.01:0,3,58	0/1:13,0:7:45.67:46,0,47	1/1:6,0:6:2.97:20,3,0	./.	1/1:5,0:5:3:26,3,0	0/0:3,0:2:0:0,0,0
chr10	40534221	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAGAGAGA	T	390.43	PASS	AB=0.919;AC=7;AF=0.175;AN=40;BaseQRankSum=3.504;DP=326;FS=2.445;HRun=0;HaplotypeScore=153.5279;InbreedingCoeff=0.2054;MQ=28.51;MQ0=88;MQRankSum=-1.251;QD=5.21;ReadPosRankSum=1.292;VQSLOD=2.9183;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:20:30.09:0,30,2131	./.	./.	./.	./.	0/1:14,0:9:51.36:51,0,129	0/0:12,0:7:6.91:0,7,305	0/0:14,0:8:18.04:0,18,404	./.	0/0:14,0:8:21.17:0,21,1212	0/0:6,0:3:3.01:0,3,207	0/1:8,0:6:0:0,0,0	1/1:6,0:4:2.92:17,3,0	0/0:3,0:2:3.01:0,3,81	1/1:3,13:16:3.38:297,3,0	./.	0/1:21,10:16:99:128,0,407	0/0:41,0:22:54.17:0,54,4356	0/0:9,0:6:12.04:0,12,746	./.	0/0:31,0:8:3.01:0,3,257	0/0:14,0:12:6.02:0,6,153	0/0:4,0:3:3.01:0,3,301	0/0:14,0:8:5.69:0,6,487	0/0:2,0:1:3.01:0,3,280	0/0:11,0:5:12.04:0,12,609	0/0:11,0:8:15.05:0,15,453	./.
chr10	40534251	.	TGAGAGAGA	T	95.88	PASS	AB=1.000;AC=9;AF=0.196;AN=46;BaseQRankSum=1.894;DP=370;FS=1.780;HRun=0;HaplotypeScore=76.6414;InbreedingCoeff=0.3758;MQ=30.72;MQ0=63;MQRankSum=-0.814;QD=0.90;ReadPosRankSum=0.932;VQSLOD=1.3954;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:19:6.22:6,0,606	./.	0/0:5,0:1:3.01:0,3,44	0/0:6,0:2:6.02:0,6,174	1/1:11,0:9:2.97:20,3,0	0/0:18,0:12:7.22:0,7,97	0/0:12,0:7:3.90:0,4,77	0/0:20,0:13:33.11:0,33,891	0/0:7,0:5:6.02:0,6,72	0/0:13,0:8:15.52:0,16,416	0/0:11,0:9:3.34:0,3,74	./.	0/0:8,0:5:3.01:0,3,60	./.	1/1:19,0:19:3.95:68,4,0	./.	1/1:26,0:15:6.02:109,6,0	0/0:43,0:29:57.10:0,57,1520	0/0:9,0:5:8.98:0,9,175	0/1:6,0:5:0:0,0,0	0/0:24,0:9:6.02:0,6,175	0/0:14,0:14:9:0,9,230	./.	0/1:15,0:9:0:0,0,0	0/0:8,0:7:2.79:0,3,80	0/0:12,0:7:14.96:0,15,290	0/0:15,0:11:9.03:0,9,184	0/0:8,0:5:9.03:0,9,245
chr10	40534628	.	A	ACC	2207.89	PASS	AB=0.835;AC=17;AF=0.304;AN=56;BaseQRankSum=0.443;DP=556;FS=0.394;HRun=1;HaplotypeScore=85.7335;InbreedingCoeff=-0.0531;MQ=56.33;MQ0=14;MQRankSum=-0.778;QD=7.89;ReadPosRankSum=0.174;VQSLOD=0.1245;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:26:53.89:0,54,494	0/1:5,0:11:11.90:67,0,12	0/0:24,0:12:32.99:0,33,311	0/0:25,0:18:37.30:0,37,434	0/0:23,0:23:14.58:0,15,163	0/0:23,0:22:18.83:0,19,295	0/0:22,0:22:5.72:0,6,286	0/1:31,0:29:17.23:424,0,17	0/1:15,0:14:14.96:15,0,125	0/1:9,26:38:82.52:531,0,83	0/1:5,1:11:38.52:39,0,41	0/0:20,0:20:50.87:0,51,504	0/1:13,0:13:10.21:10,0,117	0/1:18,0:18:12.35:12,0,222	0/1:19,0:18:14.75:15,0,86	0/0:18,0:18:28.77:0,29,282	0/0:16,0:16:6.59:0,7,96	0/1:16,1:16:27.41:304,0,27	0/1:12,0:10:8.93:156,0,9	1/1:1,8:9:11.91:117,12,0	0/1:10,15:27:20.86:45,0,21	0/0:18,0:18:7.50:0,8,124	0/0:12,0:12:35.92:0,36,309	0/0:28,0:28:77.89:0,78,729	0/0:19,0:19:17.29:0,17,163	0/1:31,0:31:45.79:408,0,46	0/1:1,0:16:1.20:99,0,1	1/1:10,0:10:17.47:133,17,0
chr10	40534728	.	T	TCTCAGCAATA	27350.89	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=-4.722;DP=683;FS=13.151;HRun=0;HaplotypeScore=188.0520;InbreedingCoeff=0.9261;MQ=74.26;MQ0=0;MQRankSum=-17.893;QD=91.47;ReadPosRankSum=1.657;VQSLOD=4.3788;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:13,14:28:41.50:2117,42,0	1/1:7,10:18:48.16:2101,48,0	0/0:29,0:29:50.33:0,50,1395	0/0:22,0:22:54.17:0,54,1544	1/1:13,15:29:45.15:2142,45,0	0/0:21,0:21:54.17:0,54,1603	0/0:19,0:19:57.16:0,57,1615	0/0:28,0:28:69.24:0,69,2127	0/0:19,0:19:45.14:0,45,1329	1/1:11,12:25:66.20:2893,66,0	1/1:12,15:28:72.25:3119,72,0	0/0:27,0:27:66.21:0,66,1983	0/0:22,0:22:54.19:0,54,1699	0/0:20,0:20:51.16:0,51,1448	1/1:10,20:29:72.25:3489,72,0	1/1:10,17:27:60.21:2825,60,0	1/1:7,7:13:30.10:1422,30,0	1/1:7,11:19:36.12:1850,36,0	0/0:31,0:31:84.24:0,84,2222	0/0:28,0:28:72.25:0,72,2217	0/0:33,0:33:87.29:0,87,2605	1/1:15,15:32:60.16:2652,60,0	0/0:24,0:24:57.18:0,57,1665	0/0:21,0:21:57.20:0,57,1754	1/1:7,14:24:54.18:2547,54,0	0/1:23,0:23:99:193,0,1911	0/0:24,0:23:57.20:0,57,1796	0/0:16,0:16:42.14:0,42,1220
chr10	40536078	.	AG	A	1778.25	PASS	AB=0.636;AC=23;AF=0.548;AN=42;BaseQRankSum=-0.690;DP=243;FS=87.114;HRun=1;HaplotypeScore=24.0336;InbreedingCoeff=0.6372;MQ=42.69;MQ0=70;MQRankSum=0.818;QD=16.78;ReadPosRankSum=1.247;VQSLOD=0.2157;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,4:4:6.02:80,6,0	1/1:1,1:2:3.01:40,3,0	0/0:10,0:8:21.95:0,22,265	0/0:14,0:6:15.52:0,16,189	./.	./.	0/0:10,0:10:18.06:0,18,226	1/1:5,8:11:25.77:272,26,0	0/0:6,0:5:6:0,6,75	0/1:6,8:8:25.82:192,0,26	./.	0/0:7,0:4:12.04:0,12,151	0/0:4,0:3:3.01:0,3,37	0/0:7,0:6:6.02:0,6,75	./.	./.	./.	1/1:1,4:4:9.03:120,9,0	1/1:3,9:8:24.05:282,24,0	1/1:1,13:11:27.04:341,27,0	1/1:5,2:4:3.01:40,3,0	./.	0/0:6,0:4:9.01:0,9,100	0/0:7,0:3:3.01:0,3,38	1/1:1,9:5:9.03:120,9,0	1/1:1,4:4:12.02:138,12,0	1/1:2,6:7:21.07:274,21,0	1/1:10,1:1:3.01:40,3,0
chr10	40536079	.	G	GA	1787.82	PASS	AB=0.933;AC=25;AF=0.568;AN=44;BaseQRankSum=-0.184;DP=248;FS=84.327;HRun=1;HaplotypeScore=27.3840;InbreedingCoeff=0.6356;MQ=42.96;MQ0=68;MQRankSum=1.555;QD=15.96;ReadPosRankSum=0.724;VQSLOD=0.3064;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,0:4:6.02:80,6,0	1/1:2,0:2:3.01:40,3,0	0/0:11,0:9:21.95:0,22,269	0/0:14,0:6:15.52:0,16,191	1/1:3,2:4:1.25:3,1,0	./.	0/0:11,0:11:18.06:0,18,229	1/1:14,0:12:17.70:242,18,0	0/0:6,0:5:6.02:0,6,76	0/1:13,1:8:6.92:190,0,7	./.	0/0:7,0:4:12.04:0,12,152	0/0:4,0:3:3.01:0,3,38	0/0:7,0:6:6.02:0,6,76	./.	./.	./.	1/1:5,0:4:9.03:120,9,0	1/1:12,0:8:24.06:296,24,0	1/1:14,0:11:27.09:365,27,0	1/1:7,0:4:3.01:40,3,0	./.	0/0:6,0:4:9.01:0,9,100	0/0:7,0:3:3.01:0,3,38	1/1:10,0:5:9.03:120,9,0	1/1:5,0:4:12.02:138,12,0	1/1:8,0:7:21.07:274,21,0	1/1:10,1:2:3.01:40,3,0
chr10	40536124	.	TA	T	431.46	PASS	AB=0.884;AC=14;AF=0.250;AN=56;BaseQRankSum=-1.455;DP=396;FS=0.584;HRun=13;HaplotypeScore=77.9076;InbreedingCoeff=0.5339;MQ=60.65;MQ0=21;MQRankSum=0.237;QD=3.96;ReadPosRankSum=1.207;VQSLOD=1.0461;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:12,2:13:8.09:0,8,225	0/1:7,3:11:13.92:14,0,188	0/1:17,0:12:17.67:18,0,39	0/0:18,0:11:5.80:0,6,67	0/0:14,1:15:7.88:0,8,201	1/1:0,8:8:20.77:147,21,0	1/1:6,9:15:20.83:153,21,0	0/1:20,2:22:21.35:21,0,264	1/1:3,8:11:24.26:176,24,0	0/0:19,0:17:42.06:0,42,404	0/0:24,1:22:29.07:0,29,425	0/0:13,0:13:36:0,36,335	1/1:0,0:6:12.22:35,12,0	1/1:4,0:9:10.16:30,10,0	0/0:5,0:6:11.86:0,12,101	0/0:10,0:10:11.86:0,12,102	0/0:12,0:9:15.02:0,15,142	0/0:13,0:13:36.06:0,36,350	0/0:13,1:15:16.80:0,17,287	0/0:20,0:19:32.12:0,32,328	0/0:3,0:3:6:0,6,53	0/0:21,1:20:20.11:0,20,348	0/0:15,0:16:14:0,14,284	0/1:6,2:10:17.04:17,0,147	0/0:19,1:16:17.46:0,17,294	0/0:14,0:13:27.04:0,27,263	0/0:14,0:14:15.02:0,15,146	0/0:15,1:15:17.16:0,17,328
chr10	40536927	.	G	GT	5717.62	PASS	AB=1.000;AC=37;AF=0.661;AN=56;BaseQRankSum=-4.107;DP=378;FS=3.759;HRun=8;HaplotypeScore=79.8528;InbreedingCoeff=0.7984;MQ=78.49;MQ0=1;MQRankSum=-1.315;QD=20.79;ReadPosRankSum=-0.531;VQSLOD=4.7345;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,19:26:41.85:482,42,0	0/0:8,0:8:21.96:0,22,94	0/0:13,0:12:1.11:0,1,90	0/0:19,0:15:20.40:0,20,164	1/1:5,18:23:54.11:606,54,0	1/1:2,18:20:39.12:450,39,0	1/1:2,3:5:9.03:104,9,0	1/1:3,25:28:75.15:833,75,0	1/1:4,8:12:21.06:242,21,0	0/0:16,0:16:28.80:0,29,99	0/0:9,0:9:21.21:0,21,86	0/0:6,0:6:18.01:0,18,165	1/1:5,0:11:19.79:99,20,0	1/1:0,0:4:8.52:43,9,0	1/1:1,13:14:27.08:310,27,0	1/1:1,2:3:3.01:35,3,0	1/1:2,17:19:45.13:516,45,0	0/1:19,0:19:35.98:36,0,121	1/1:9,10:17:24.04:262,24,0	1/1:5,9:14:27.04:296,27,0	1/1:0,4:4:3.01:34,3,0	1/1:4,6:10:15.04:173,15,0	0/0:9,0:9:24.01:0,24,220	0/0:6,0:6:8.99:0,9,78	0/0:16,0:16:36.90:0,37,147	1/1:2,10:12:23.91:335,24,0	1/1:5,14:19:42.12:482,42,0	1/1:0,13:13:33.09:379,33,0
chr10	40537701	.	AAAAACAAAAC	A	1636.41	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.099;DP=701;FS=0.887;HRun=0;HaplotypeScore=197.7319;InbreedingCoeff=0.9905;MQ=71.46;MQ0=5;MQRankSum=-7.321;QD=65.46;ReadPosRankSum=1.102;VQSLOD=3.6357;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:69.24:0,69,3276	0/0:6,0:6:18.06:0,18,863	0/0:40,0:25:40.79:0,41,1160	0/0:65,0:30:42.36:0,42,1320	0/0:29,0:29:75.26:0,75,3514	0/0:21,0:21:60.19:0,60,2835	0/0:22,0:22:57.16:0,57,2625	0/0:23,0:23:39.13:0,39,1912	0/0:22,0:22:60.20:0,60,2983	0/0:19,0:19:51.17:0,51,2147	0/0:30,0:30:71.03:0,71,2899	0/0:26,0:26:60.19:0,60,2741	1/1:0,13:13:33.11:1018,33,0	1/1:1,11:12:24.08:740,24,0	0/0:17,0:17:42.14:0,42,1816	0/0:21,0:21:54.18:0,54,2453	0/0:41,0:41:99:0,102,4532	0/0:31,0:31:78.27:0,78,3564	0/0:22,0:22:51.16:0,51,2063	0/0:32,0:31:87.28:0,87,4025	0/0:17,0:17:45.15:0,45,2106	0/0:23,0:23:57.18:0,57,2757	0/0:20,0:20:51.17:0,51,2497	0/0:21,0:21:51.17:0,51,2352	0/0:28,0:28:72.23:0,72,3374	0/0:32,0:32:87.30:0,87,4243	0/0:32,0:32:87.30:0,87,4012	0/0:6,0:6:18.06:0,18,910
chr10	40538505	.	CGTGT	C	1137.49	PASS	AB=0.938;AC=19;AF=0.365;AN=52;BaseQRankSum=0.259;DP=538;FS=0.808;HRun=0;HaplotypeScore=97.4091;InbreedingCoeff=0.3944;MQ=62.18;MQ0=12;MQRankSum=1.783;QD=4.33;ReadPosRankSum=1.371;VQSLOD=1.8020;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:3.01:0,3,30	./.	./.	0/0:37,0:21:0.94:0,1,1	0/0:18,0:18:3:0,3,25	0/1:10,6:17:9.95:125,0,10	1/1:23,9:33:9.42:73,9,0	0/1:18,0:17:8.04:8,0,88	1/1:12,6:19:18.05:248,18,0	0/0:19,0:18:19.88:0,20,286	0/0:12,0:12:3.01:0,3,67	1/1:13,6:19:6.49:94,6,0	1/1:7,5:12:9.03:138,9,0	1/1:8,5:14:10.16:118,10,0	0/0:9,0:9:9.21:0,9,250	0/0:11,0:11:9.03:0,9,167	0/0:28,0:27:5.99:0,6,87	0/0:15,0:14:14.93:0,15,164	0/0:11,0:11:9.02:0,9,123	0/0:10,0:10:8.04:0,8,96	0/1:60,0:61:16.06:16,0,371	0/1:10,0:10:0.11:0,0,0	1/1:6,6:13:2.61:46,3,0	1/1:21,14:35:26.92:419,27,0	0/0:23,0:21:3.01:0,3,52	0/0:20,0:19:18.06:0,18,312	0/1:11,0:11:14.32:14,0,75	0/0:3,0:3:3.01:0,3,57
chr10	40538551	.	T	TGCGC	4171.09	PASS	AB=0.541;AC=33;AF=0.589;AN=56;BaseQRankSum=-3.815;DP=548;FS=6.482;HRun=0;HaplotypeScore=107.3843;InbreedingCoeff=0.7814;MQ=62.88;MQ0=7;MQRankSum=-0.028;QD=12.09;ReadPosRankSum=-0.548;VQSLOD=2.7325;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:2,0:15:3.01:43,3,0	1/1:6,0:6:9.03:129,9,0	0/0:21,0:14:41.73:0,42,669	0/0:23,0:15:27.80:0,28,551	0/1:3,1:18:0:0,0,0	0/0:18,0:18:39.12:0,39,567	0/0:31,0:30:54:0,54,824	1/1:20,0:19:39.09:565,39,0	0/0:15,0:15:36.11:0,36,501	1/1:15,0:15:26.48:385,26,0	1/1:5,2:7:2.80:50,3,0	0/0:18,0:18:39.12:0,39,574	0/0:12,0:12:27.09:0,27,405	0/0:21,0:21:46.71:0,47,648	1/1:8,11:21:5.99:100,6,0	1/1:1,11:13:9.03:240,9,0	0/1:8,2:35:0.11:0,0,0	1/1:19,1:19:39.33:583,39,0	1/1:11,0:11:18.03:233,18,0	1/1:7,10:18:2.86:24,3,0	1/1:21,45:68:4:128,4,0	0/1:1,15:19:0.11:0,0,1	0/0:15,0:15:24.45:0,24,378	0/0:29,0:28:60.20:0,60,886	1/1:15,0:15:14.81:198,15,0	1/1:6,24:31:71.95:1053,72,0	1/1:9,0:9:24.53:327,25,0	1/1:1,1:2:6.02:113,6,0
chr10	40540272	.	AT	A	3891.23	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=12.853;DP=671;FS=1.285;HRun=2;HaplotypeScore=80.0971;InbreedingCoeff=0.9954;MQ=63.37;MQ0=1;MQRankSum=0.548;QD=36.03;ReadPosRankSum=3.067;VQSLOD=4.2901;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,117,1726	0/0:7,0:7:21.06:0,21,295	0/0:28,0:23:63.15:0,63,890	0/0:29,0:26:69.17:0,69,990	0/0:28,0:28:84.27:0,84,1231	0/0:25,0:25:75.25:0,75,1123	0/0:34,0:34:99:0,102,1486	0/0:26,0:26:75.25:0,75,1107	0/0:20,0:20:60.20:0,60,897	0/0:34,0:35:99:0,102,1496	0/0:19,0:19:57.19:0,57,853	1/1:1,25:26:69.22:894,69,0	1/1:1,15:16:39.11:506,39,0	1/1:0,19:19:57.19:740,57,0	0/0:28,0:28:81.26:0,81,1194	0/0:16,0:16:45.14:0,45,653	0/0:20,0:20:60.20:0,60,899	0/0:24,0:24:72.24:0,72,1075	0/0:22,0:22:66.21:0,66,968	0/0:17,0:17:48.16:0,48,720	0/0:42,0:42:99:0,126,1878	0/0:25,0:25:69.22:0,69,1013	1/1:0,19:19:54.18:699,54,0	1/1:0,28:28:81.26:1052,81,0	0/0:19,0:19:57.19:0,57,855	0/0:27,0:27:81.27:0,81,1214	0/0:27,0:27:75.25:0,75,1108	0/0:5,0:5:15.05:0,15,225
chr10	40540433	.	CT	C	6680.79	PASS	AB=0.779;AC=46;AF=0.821;AN=56;BaseQRankSum=2.706;DP=605;FS=5.678;HRun=12;HaplotypeScore=76.7006;InbreedingCoeff=0.6939;MQ=69.07;MQ0=7;MQRankSum=1.681;QD=12.53;ReadPosRankSum=3.503;VQSLOD=5.0170;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,42:48:99:876,117,0	1/1:2,5:7:11.95:93,12,0	0/1:28,0:18:6.55:7,0,142	0/0:16,0:11:2.23:0,2,88	1/1:7,16:23:40.93:323,41,0	0/0:17,0:18:44.92:0,45,440	0/0:18,0:19:44.17:0,44,461	1/1:7,18:25:44.78:348,45,0	0/0:17,2:18:18.72:0,19,357	1/1:6,15:21:13.43:277,13,0	1/1:5,11:16:23.88:186,24,0	1/1:3,0:23:38.34:111,38,0	1/1:4,0:18:26.47:77,26,0	1/1:3,0:16:20.36:59,20,0	1/1:2,17:18:38.84:302,39,0	1/1:3,11:14:26.88:209,27,0	1/1:4,31:36:79.66:604,80,0	1/1:7,35:40:56.38:658,56,0	1/1:6,17:22:47.79:371,48,0	1/1:7,24:31:46.12:467,46,0	1/1:3,14:16:32.86:255,33,0	1/1:3,10:14:28.92:215,29,0	1/1:4,0:23:38.70:112,39,0	1/1:3,0:16:26.26:76,26,0	0/1:4,15:19:13.80:276,0,14	1/1:4,18:22:53.78:417,54,0	1/1:5,18:24:45.64:335,46,0	1/1:5,1:5:4.80:28,5,0
chr10	40541741	.	C	CACACA	1982.72	PASS	AB=0.839;AC=30;AF=0.536;AN=56;BaseQRankSum=7.368;DP=606;FS=44.519;HRun=0;HaplotypeScore=119.0614;InbreedingCoeff=-0.4422;MQ=45.60;MQ0=77;MQRankSum=-3.042;QD=4.17;ReadPosRankSum=-2.714;VQSLOD=-0.1408;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:25:26.52:27,0,430	0/1:3,0:8:68.27:76,0,68	0/0:52,0:3:9.01:0,9,92	0/0:58,0:11:30.02:0,30,328	0/0:20,0:20:19.44:0,19,327	1/1:2,0:14:14.32:146,14,0	0/1:6,0:11:34.21:38,0,34	0/1:38,0:33:99:159,0,782	0/1:15,0:17:0.68:258,0,1	0/1:26,0:22:15.69:16,0,608	0/1:19,0:19:47.40:47,0,322	1/1:6,0:6:10.83:119,11,0	0/1:10,0:8:30.90:54,0,31	1/1:5,0:3:3.01:38,3,0	0/1:12,1:22:89.48:89,0,159	0/1:6,0:12:65.24:92,0,65	0/1:25,0:36:42.06:42,0,640	0/1:19,0:20:71.24:71,0,357	0/1:22,0:15:62.30:62,0,247	0/1:7,0:12:17.38:17,0,171	0/1:28,0:24:37.03:37,0,243	0/1:9,0:13:49.56:50,0,174	1/1:8,0:6:11.70:69,12,0	1/1:25,0:22:40.92:512,41,0	0/1:11,0:13:30:30,0,254	0/1:21,0:17:57.33:57,0,380	0/1:14,0:13:14.82:15,0,237	0/1:10,0:12:27.64:28,0,224
chr10	40542773	.	C	CTCCG	29099.72	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-11.543;DP=635;FS=9.216;HRun=0;HaplotypeScore=96.5383;InbreedingCoeff=0.9771;MQ=67.96;MQ0=2;MQRankSum=-6.828;QD=54.60;ReadPosRankSum=4.788;VQSLOD=6.1397;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:10,32:46:29.14:1963,29,0	1/1:4,3:8:9.03:236,9,0	0/0:25,0:25:66.21:0,66,1162	0/0:22,0:21:44.12:0,44,729	1/1:2,19:23:51.17:1342,51,0	0/0:14,0:14:30.10:0,30,552	0/0:23,0:23:66.23:0,66,1214	1/1:11,23:36:81.26:1862,81,0	0/0:18,0:18:48.16:0,48,869	1/1:9,20:31:72.22:1759,72,0	1/1:3,16:21:39.13:1027,39,0	1/1:3,11:15:33.11:869,33,0	1/1:5,20:26:63.22:1643,63,0	1/1:0,21:21:54.19:1422,54,0	1/1:2,22:24:63.22:1659,63,0	1/1:1,17:19:51.18:1346,51,0	1/1:5,24:30:11.12:1603,11,0	1/1:3,19:22:57.20:1503,57,0	1/1:9,11:23:45.03:1007,45,0	1/1:11,27:39:84.29:2203,84,0	1/1:2,17:21:42.14:1107,42,0	1/1:3,14:20:36.59:947,37,0	1/1:3,7:12:24.08:619,24,0	1/1:9,15:24:35.71:950,36,0	1/1:4,14:20:36.12:948,36,0	1/1:2,13:18:45.15:1108,45,0	1/1:3,15:18:42.14:1106,42,0	1/1:2,11:13:33.11:871,33,0
chr10	40544510	.	G	GTC	239.60	PASS	AB=1.000;AC=17;AF=0.370;AN=46;BaseQRankSum=-5.146;DP=636;FS=2.839;HRun=0;HaplotypeScore=148.7121;InbreedingCoeff=0.5114;MQ=68.58;MQ0=33;MQRankSum=4.025;QD=0.75;ReadPosRankSum=-2.272;VQSLOD=2.4462;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:2.84:0,3,14	./.	0/1:59,0:22:0:0,0,0	0/1:90,0:31:0:0,0,0	0/0:18,0:18:5.68:0,6,28	1/1:24,0:24:9:92,9,0	0/1:24,0:24:2.21:38,0,2	./.	1/1:16,7:23:6.02:88,6,0	0/0:20,0:19:17.04:0,17,83	./.	1/1:20,0:20:2.94:26,3,0	1/1:11,0:11:2.68:11,3,0	1/1:18,0:16:3.01:43,3,0	0/0:14,0:14:14.20:0,14,70	0/0:13,0:13:2.84:0,3,14	0/0:20,0:20:10.56:0,11,47	0/0:19,0:19:7.72:0,8,34	0/0:19,0:19:2.84:0,3,14	0/0:22,0:22:11.36:0,11,56	./.	0/0:16,0:16:6.57:0,7,30	1/1:22,0:22:5.98:48,6,0	1/1:29,0:28:3:31,3,0	0/0:15,0:15:5.68:0,6,28	0/0:16,0:16:5.68:0,6,28	0/0:21,0:20:22.73:0,23,111	./.
chr10	40544535	.	TC	T	221.70	PASS	AB=0.808;AC=10;AF=0.185;AN=54;BaseQRankSum=7.498;DP=562;FS=1.806;HRun=1;HaplotypeScore=136.1154;InbreedingCoeff=-0.2537;MQ=48.68;MQ0=40;MQRankSum=-7.832;QD=1.08;ReadPosRankSum=3.921;VQSLOD=-0.7094;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:29,5:33:18.22:18,0,390	0/0:3,1:4:5.97:0,6,57	0/0:32,0:7:2.25:0,2,38	0/0:63,0:7:14.94:0,15,168	0/1:8,4:12:0.75:1,0,139	0/0:15,0:15:35.89:0,36,461	0/0:21,0:21:48.14:0,48,610	0/0:18,0:16:44.60:0,45,370	0/0:20,0:20:42.11:0,42,502	0/1:18,6:22:14.20:14,0,328	0/1:16,1:17:13.45:13,0,210	0/0:21,0:19:24.71:0,25,307	0/0:14,0:14:9.03:0,9,122	0/0:15,0:13:24.07:0,24,288	0/1:4,6:9:15.39:79,0,15	0/0:7,2:8:2.08:0,2,91	0/1:20,5:26:35.26:35,0,289	0/1:15,2:15:7.19:7,0,235	0/0:13,1:12:19.48:0,19,276	0/1:21,5:26:87.01:87,0,198	0/0:24,1:23:12.57:0,13,286	0/1:13,3:16:28.09:28,0,150	0/0:20,0:20:8.11:0,8,128	0/0:35,0:34:24.08:0,24,319	0/0:9,4:12:1.07:0,1,165	0/0:12,2:14:10.37:0,10,268	0/1:13,9:23:69.82:70,0,246	./.
chr10	40544537	.	TCTCTCTCTCTCTCTCTC	T	6130.94	PASS	AB=0.847;AC=18;AF=0.333;AN=54;BaseQRankSum=10.613;DP=553;FS=0.000;HRun=0;HaplotypeScore=223.3586;InbreedingCoeff=-0.3509;MQ=48.63;MQ0=41;MQRankSum=-8.685;QD=20.64;ReadPosRankSum=7.715;VQSLOD=2.8446;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:31,5:35:99:320,0,131	0/1:2,1:3:32.10:43,0,32	0/0:37,0:8:14.73:0,15,142	0/0:60,0:6:15.51:0,16,179	0/1:8,4:12:63.51:303,0,64	0/0:14,0:14:36.12:0,36,1721	0/0:21,0:21:47.68:0,48,1876	0/1:18,0:16:79.80:80,0,151	0/0:18,0:18:36.12:0,36,1226	0/1:17,6:21:99:794,0,179	0/1:15,1:16:51.05:81,0,51	0/0:21,0:19:22.78:0,23,651	0/0:13,0:13:9.03:0,9,281	0/0:15,0:13:26.11:0,26,776	1/1:4,6:9:18.06:668,18,0	0/1:7,2:8:38.43:218,0,38	0/1:20,5:25:94.02:566,0,94	0/1:14,2:14:99:244,0,402	0/1:13,1:12:99:152,0,110	0/1:20,5:25:59.34:578,0,59	0/1:26,1:25:90.77:110,0,91	0/1:12,3:15:40.04:295,0,40	0/0:20,0:20:7.27:0,7,521	0/0:35,0:34:24.08:0,24,1516	0/1:9,4:12:68.93:303,0,69	0/1:10,2:12:76.63:256,0,77	0/1:14,9:23:41.96:1121,0,42	./.
chr10	40544554	.	C	CTT	5729.11	PASS	AB=0.821;AC=42;AF=0.778;AN=54;BaseQRankSum=3.816;DP=518;FS=1.155;HRun=1;HaplotypeScore=122.7367;InbreedingCoeff=0.5214;MQ=62.43;MQ0=15;MQRankSum=-3.556;QD=13.77;ReadPosRankSum=3.340;VQSLOD=2.1625;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:34,0:33:76.90:586,77,0	1/1:2,0:2:5.93:40,6,0	0/0:31,0:12:25.54:0,26,229	0/0:35,0:8:10.30:0,10,91	1/1:13,0:13:30.58:237,31,0	0/0:18,0:18:24.27:0,24,302	0/0:18,0:18:23.98:0,24,316	1/1:24,0:22:62.70:562,63,0	0/1:15,0:15:10.80:11,0,146	1/1:16,0:15:38.04:265,38,0	1/1:16,0:16:39.80:333,40,0	0/1:8,0:18:18.95:28,0,19	1/1:2,0:15:3.01:31,3,0	1/1:16,0:15:38.87:325,39,0	1/1:15,0:14:30.03:203,30,0	0/1:8,0:7:5.19:109,0,5	1/1:23,0:23:52.26:370,52,0	1/1:13,0:11:9.86:141,10,0	1/1:12,0:11:31.88:241,32,0	1/1:19,0:19:46.62:341,47,0	1/1:24,0:23:47.19:366,47,0	1/1:17,0:17:48.28:356,48,0	1/1:4,15:20:5.69:70,6,0	0/1:18,20:38:39.87:40,0,102	1/1:11,0:10:27.51:200,28,0	1/1:13,0:13:36.27:278,36,0	1/1:32,0:32:84.10:597,84,0	./.
chr10	40545918	.	GACA	G	21021.74	PASS	AB=0.567;AC=45;AF=0.804;AN=56;BaseQRankSum=6.140;DP=655;FS=17.350;HRun=0;HaplotypeScore=108.1578;InbreedingCoeff=0.9127;MQ=72.22;MQ0=0;MQRankSum=-5.495;QD=39.07;ReadPosRankSum=6.561;VQSLOD=4.7348;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,33:36:90.24:1397,90,0	1/1:0,10:10:30.10:475,30,0	0/0:25,0:25:72.22:0,72,1428	0/0:22,0:21:48.48:0,48,997	1/1:0,37:37:93.32:1460,93,0	0/0:25,0:25:72.25:0,72,1523	0/0:19,0:19:54.19:0,54,1177	1/1:3,27:30:75.25:1183,75,0	0/0:26,0:26:75.26:0,75,1632	1/1:2,31:33:93.30:1444,93,0	1/1:0,21:21:60.12:919,60,0	1/1:0,25:25:60.20:951,60,0	1/1:4,20:24:45.15:714,45,0	1/1:0,18:18:48.16:759,48,0	1/1:1,16:17:36.12:571,36,0	0/1:4,13:17:3.61:576,0,4	1/1:0,23:23:63.21:996,63,0	1/1:2,13:15:27.09:428,27,0	1/1:2,21:23:60.68:940,61,0	1/1:1,25:26:72.25:1141,72,0	1/1:1,22:23:54.18:854,54,0	1/1:1,22:23:54.18:844,54,0	1/1:1,19:21:54.18:856,54,0	1/1:2,22:24:51.17:808,51,0	1/1:0,22:22:63.21:998,63,0	1/1:1,28:28:81.22:1191,81,0	1/1:2,29:31:84.29:1329,84,0	1/1:5,5:10:12.04:190,12,0
chr10	40546231	.	ACT	A	6376.48	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=9.691;DP=540;FS=0.726;HRun=0;HaplotypeScore=71.8893;InbreedingCoeff=0.9938;MQ=89.77;MQ0=1;MQRankSum=0.241;QD=33.74;ReadPosRankSum=0.342;VQSLOD=6.9057;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,30:31:78.26:1071,78,0	0/0:7,0:7:21.07:0,21,371	0/0:24,0:24:41.51:0,42,852	0/0:23,0:23:60.07:0,60,1011	0/0:14,0:14:39.09:0,39,658	0/0:20,0:20:54.18:0,54,943	0/0:24,0:24:60.21:0,60,1058	1/1:3,25:28:75.20:965,75,0	0/0:31,0:31:87.30:0,87,1539	0/0:20,0:20:54.18:0,54,934	0/0:9,0:9:21.07:0,21,368	0/0:21,0:21:63.22:0,63,1112	0/0:14,0:14:39.13:0,39,692	0/0:18,0:18:54.19:0,54,958	0/0:18,0:18:45.15:0,45,798	0/0:12,0:12:36.12:0,36,639	0/0:19,0:19:57.20:0,57,1011	0/0:20,0:20:60.16:0,60,1012	1/1:2,14:16:42.07:496,42,0	1/1:0,13:12:33.11:453,33,0	1/1:0,29:29:81.27:1113,81,0	1/1:3,20:23:45.15:617,45,0	0/0:16,0:16:42.13:0,42,712	0/0:24,0:24:72.23:0,72,1246	0/0:17,0:17:42.14:0,42,744	1/1:1,19:20:57.17:757,57,0	1/1:0,22:22:54.18:740,54,0	1/1:1,6:7:12.04:165,12,0
chr10	40546482	.	G	GAT	6670.24	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=2.302;DP=573;FS=1.283;HRun=0;HaplotypeScore=117.0317;InbreedingCoeff=0.9647;MQ=75.64;MQ0=9;MQRankSum=-3.413;QD=17.65;ReadPosRankSum=1.194;VQSLOD=5.0910;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:41,0:40:80.46:735,80,0	1/1:9,0:7:12.85:97,13,0	0/0:38,0:27:38.95:0,39,577	0/0:35,0:18:47.74:0,48,475	1/1:8,0:9:20.31:149,20,0	0/0:18,0:18:32.95:0,33,272	0/0:28,0:28:62.13:0,62,505	1/1:35,0:35:98.89:844,99,0	0/0:17,0:17:26.82:0,27,257	1/1:19,0:19:50.55:419,51,0	1/1:14,0:14:29.90:240,30,0	0/0:20,0:20:35.74:0,36,294	1/1:15,0:15:26.74:166,27,0	1/1:17,0:17:48.99:372,49,0	1/1:20,0:19:47.95:422,48,0	1/1:13,0:13:32.95:273,33,0	1/1:11,0:11:29.44:213,29,0	1/1:2,13:13:3.01:51,3,0	1/1:21,0:21:55.01:417,55,0	1/1:27,0:27:69.13:520,69,0	1/1:20,0:19:32.83:253,33,0	1/1:19,0:19:39.63:370,40,0	0/0:12,0:12:23.70:0,24,192	0/0:27,0:27:62.54:0,63,519	1/1:21,0:21:38.89:317,39,0	1/1:19,0:18:40.66:320,41,0	1/1:22,0:22:45.65:334,46,0	1/1:10,0:10:23.61:160,24,0
chr10	40546483	.	ATCTC	A	781.41	PASS	AB=0.909;AC=23;AF=0.548;AN=42;BaseQRankSum=2.679;DP=599;FS=25.451;HRun=0;HaplotypeScore=152.0924;InbreedingCoeff=0.5539;MQ=73.99;MQ0=9;MQRankSum=-1.693;QD=3.13;ReadPosRankSum=3.089;VQSLOD=1.1651;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:43:39.13:0,39,775	./.	./.	0/0:35,0:18:0:0,0,0	./.	1/1:9,9:18:6.02:92,6,0	1/1:20,8:28:6.02:92,6,0	./.	1/1:14,2:17:6.02:75,6,0	0/0:25,0:24:21.46:0,21,354	0/0:16,0:16:0:0,0,0	1/1:12,8:20:5.66:92,6,0	0/0:12,0:13:1.53:0,2,6	1/1:16,0:17:4.89:41,5,0	0/0:23,0:22:3.01:0,3,49	0/0:13,0:13:0:0,0,0	./.	0/0:15,0:13:3:0,3,27	1/1:18,0:20:6.01:56,6,0	1/1:22,0:27:9.07:48,9,0	0/1:18,0:19:0:0,0,0	0/0:19,0:19:15.01:0,15,226	1/1:9,0:12:2.52:23,3,0	1/1:18,12:30:17.99:277,18,0	./.	1/1:15,0:18:5.60:38,6,0	1/1:18,0:22:9:80,9,0	./.
chr10	40550378	.	ACCAT	A	2972.97	PASS	AB=0.987;AC=25;AF=0.481;AN=52;BaseQRankSum=-3.886;DP=1800;FS=13.484;HRun=0;HaplotypeScore=178.5424;InbreedingCoeff=-0.4279;MQ=23.82;MQ0=574;MQRankSum=3.866;QD=1.90;ReadPosRankSum=-5.482;VQSLOD=-0.0916;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:92,0:56:83.77:204,0,84	0/1:24,0:9:23.38:51,0,23	./.	./.	0/1:47,0:22:15.43:25,0,15	1/1:57,0:27:1.95:217,2,0	0/1:123,0:31:3.50:108,0,4	0/0:57,0:9:23.23:0,23,140	0/1:70,0:39:25.93:245,0,26	0/1:103,0:29:82.39:270,0,82	0/1:30,15:19:6.61:31,0,7	0/0:64,0:41:30.05:0,30,365	0/1:54,0:30:70.14:165,0,70	0/1:59,0:29:31.34:146,0,31	0/1:96,0:51:63.22:281,0,63	0/1:69,0:37:6.42:150,0,6	0/1:70,0:39:14.47:231,0,14	0/1:57,0:30:60.05:60,0,130	0/1:50,0:18:62.72:63,0,78	0/1:45,0:21:34.63:35,0,39	0/1:203,0:86:99:178,0,124	0/1:62,0:35:53.10:53,0,68	0/0:45,0:19:24.64:0,25,138	0/0:71,0:40:22.37:0,22,228	1/1:76,0:31:15.97:207,16,0	0/1:90,0:37:99:246,0,138	0/1:52,0:27:3.12:115,0,3	1/1:19,0:10:5.98:47,6,0
chr10	40551813	.	G	GTTTTT	8500.94	PASS	AB=0.969;AC=44;AF=0.786;AN=56;BaseQRankSum=-1.006;DP=454;FS=14.179;HRun=0;HaplotypeScore=83.4665;InbreedingCoeff=0.7697;MQ=63.96;MQ0=3;MQRankSum=-4.926;QD=25.61;ReadPosRankSum=-0.487;VQSLOD=3.3614;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:32,0:31:15.01:169,15,0	1/1:6,0:6:18.05:222,18,0	0/0:35,0:20:41.88:0,42,609	0/0:20,0:16:31.45:0,31,515	1/1:17,0:16:24.22:199,24,0	0/0:29,0:29:84.27:0,84,1693	0/0:24,0:24:70.77:0,71,1358	1/1:31,0:29:60.56:903,61,0	0/0:14,0:14:39.12:0,39,716	1/1:22,0:22:48.26:671,48,0	1/1:1,8:10:11.95:211,12,0	0/1:14,0:15:0.69:149,0,1	1/1:7,4:12:26.87:604,27,0	1/1:16,1:17:32.57:565,33,0	1/1:12,0:12:33.55:402,34,0	1/1:12,0:10:24.07:298,24,0	1/1:17,0:17:41.87:494,42,0	1/1:5,0:6:15.05:234,15,0	1/1:15,0:13:39.10:557,39,0	1/1:0,7:12:14.94:216,15,0	1/1:4,0:4:12.02:151,12,0	1/1:11,0:10:24.06:298,24,0	0/1:19,0:18:12.71:165,0,13	1/1:3,0:3:1.18:32,1,0	1/1:14,0:13:27.50:341,28,0	1/1:21,0:20:57.09:753,57,0	1/1:17,0:17:50.26:625,50,0	1/1:7,0:7:14.88:240,15,0
chr10	40551818	.	T	TG	1743.73	PASS	AB=0.924;AC=19;AF=0.339;AN=56;BaseQRankSum=8.112;DP=539;FS=114.781;HRun=0;HaplotypeScore=80.3326;InbreedingCoeff=-0.3229;MQ=56.13;MQ0=3;MQRankSum=-1.015;QD=5.52;ReadPosRankSum=4.351;VQSLOD=0.1347;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,24:38:35.65:0,36,247	0/1:10,0:10:51.34:74,0,51	0/0:31,0:16:14.56:0,15,322	0/0:19,0:15:19.50:0,19,251	0/1:7,10:16:10.94:11,0,91	0/0:29,0:29:82.11:0,82,964	0/0:23,0:23:65.42:0,65,754	0/1:36,0:33:99:265,0,190	0/0:14,0:14:35.07:0,35,355	0/1:15,15:30:99:152,0,200	0/1:12,0:12:29.65:30,0,88	0/0:23,0:23:59.21:0,59,407	0/1:12,1:17:40.02:40,0,67	0/1:8,1:19:29.04:47,0,29	0/1:22,0:22:99:126,0,121	0/1:17,0:15:90.21:90,0,94	0/1:17,0:17:2.95:164,0,3	0/1:10,0:10:52.53:53,0,62	0/1:16,0:13:16.08:186,0,16	0/0:15,0:15:4.50:0,4,80	0/1:2,0:2:8:8,0,14	0/1:19,0:18:76.28:76,0,98	0/0:22,0:21:51:0,51,384	0/0:8,0:8:7.69:0,8,45	1/1:14,0:12:18.28:144,18,0	0/1:24,0:23:99:209,0,112	0/1:25,0:24:99:207,0,114	0/1:9,0:9:24.37:24,0,67
chr10	40552539	.	T	TG	6869.38	PASS	AB=0.789;AC=24;AF=0.429;AN=56;BaseQRankSum=19.253;DP=1250;FS=57.114;HRun=0;HaplotypeScore=531.4507;InbreedingCoeff=-0.7353;MQ=44.05;MQ0=3;MQRankSum=-14.930;QD=6.71;ReadPosRankSum=1.756;VQSLOD=2.1714;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:33,11:44:99:289,0,743	0/1:14,6:20:99:274,0,444	0/0:42,1:28:81.08:0,81,1048	0/0:55,0:40:98.75:0,99,1389	0/1:31,14:45:99:319,0,932	0/1:27,13:40:99:378,0,722	0/1:39,10:49:99:237,0,1139	0/1:40,10:49:99:295,0,1302	0/1:33,9:42:99:268,0,1062	0/1:41,14:54:99:477,0,1206	0/1:16,14:30:99:321,0,378	0/1:46,15:61:99:382,0,1255	0/1:23,14:37:99:386,0,662	0/1:38,17:55:99:304,0,1066	0/1:49,14:63:99:321,0,1463	0/1:31,17:48:99:361,0,933	0/1:48,5:53:4.26:4,0,1631	0/0:27,0:27:26.61:0,27,862	0/1:27,6:32:99:178,0,718	0/1:18,12:30:99:455,0,395	0/0:97,2:99:99:0,142,2747	0/1:39,11:50:99:179,0,1055	0/1:20,11:31:99:216,0,545	0/1:47,6:53:65.60:66,0,843	0/1:26,7:33:99:107,0,848	0/1:40,12:52:99:356,0,1251	0/1:19,14:32:99:514,0,497	0/1:12,5:17:99:183,0,414
chr10	40552545	.	A	ATG	7645.43	PASS	AB=0.778;AC=23;AF=0.411;AN=56;BaseQRankSum=19.782;DP=1275;FS=29.743;HRun=0;HaplotypeScore=587.0259;InbreedingCoeff=-0.6973;MQ=42.95;MQ0=4;MQRankSum=-15.453;QD=7.58;ReadPosRankSum=2.275;VQSLOD=2.3766;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:33,12:45:99:239,0,661	0/1:15,6:21:99:304,0,345	0/0:43,0:26:45.10:0,45,555	0/0:49,0:35:81.14:0,81,1024	0/1:33,16:49:99:292,0,840	0/1:25,14:39:99:408,0,482	0/1:38,13:51:99:180,0,1008	0/1:45,10:54:99:371,0,1279	0/1:35,9:44:99:296,0,892	0/1:39,16:54:99:695,0,1045	0/1:19,13:32:99:293,0,370	0/1:45,19:64:99:442,0,471	0/1:24,14:38:99:435,0,198	0/1:41,18:59:99:373,0,345	0/1:44,18:62:99:357,0,1070	0/1:33,18:51:99:367,0,698	0/0:46,3:49:7.64:0,8,1313	0/0:27,0:27:54.67:0,55,658	0/1:29,6:34:99:318,0,558	0/1:15,16:31:99:449,0,368	0/0:96,3:99:99:0,147,2253	0/1:41,14:55:99:204,0,792	0/1:21,12:33:99:204,0,218	0/1:45,6:51:7.87:8,0,395	0/1:32,7:39:99:113,0,768	0/1:34,11:45:99:472,0,980	0/1:18,16:33:99:613,0,532	0/1:16,4:20:99:210,0,298
chr10	40552555	.	A	ATG	14686.46	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=18.623;DP=1296;FS=34.828;HRun=0;HaplotypeScore=612.6346;InbreedingCoeff=-0.3584;MQ=42.39;MQ0=4;MQRankSum=-12.692;QD=13.39;ReadPosRankSum=-2.227;VQSLOD=2.2408;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:48,0:48:99:325,0,587	0/1:21,0:21:99:248,0,425	0/0:36,0:20:36.03:0,36,437	0/0:49,0:32:65.73:0,66,787	0/1:51,0:51:99:510,0,622	0/1:41,0:41:99:517,0,340	0/1:53,0:53:99:303,0,1037	0/1:55,0:54:99:154,0,1119	0/1:46,0:46:99:240,0,847	0/1:60,0:58:99:528,0,1051	0/1:35,0:35:99:267,0,450	1/1:33,33:66:99:2005,135,0	1/1:24,14:38:81.26:1197,81,0	1/1:37,24:61:99:1724,114,0	0/1:62,0:62:99:645,0,780	0/1:55,0:55:99:620,0,722	0/1:41,0:41:20.71:21,0,882	0/0:24,0:24:28.41:0,28,514	0/1:36,0:33:99:341,0,410	0/1:32,0:32:99:437,0,348	0/0:90,0:89:99:0,133,1878	0/1:57,0:57:99:562,0,543	1/1:23,20:43:96.32:1497,96,0	1/1:23,27:50:51.99:880,52,0	0/1:42,0:42:99:390,0,761	0/1:50,0:50:99:506,0,874	0/1:35,0:34:99:537,0,539	0/1:19,0:19:99:234,0,292
chr10	40552556	.	T	TGC	18114.23	PASS	AB=0.781;AC=30;AF=0.536;AN=56;BaseQRankSum=20.447;DP=1336;FS=43.322;HRun=0;HaplotypeScore=637.7628;InbreedingCoeff=-0.4216;MQ=42.33;MQ0=4;MQRankSum=-14.764;QD=15.63;ReadPosRankSum=-1.161;VQSLOD=1.7190;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:37,13:50:99:502,0,734	0/1:15,7:22:99:394,0,526	0/0:34,0:20:48.10:0,48,648	0/0:49,0:33:77.81:0,78,1110	0/1:33,20:53:99:769,0,871	0/1:27,15:42:99:764,0,491	0/1:36,17:53:99:493,0,1304	0/1:48,9:56:99:333,0,1498	0/1:37,9:46:99:346,0,1100	0/1:45,17:60:99:854,0,1354	0/1:24,14:38:99:384,0,591	1/1:44,23:68:92.32:1875,92,0	1/1:20,18:38:44.29:1214,44,0	1/1:44,21:65:83.08:1700,83,0	0/1:45,20:65:99:992,0,964	0/1:36,21:57:99:908,0,915	0/1:39,3:42:61.67:62,0,1251	0/1:24,0:24:4.37:4,0,699	0/1:30,10:37:99:703,0,663	0/1:19,15:34:99:664,0,453	0/0:86,5:90:99:0,169,2397	0/1:36,20:56:99:800,0,720	1/1:28,15:43:96.18:1263,96,0	1/1:43,7:50:9.43:499,9,0	0/1:32,13:45:99:622,0,990	0/1:35,17:52:99:808,0,1101	0/1:21,16:36:99:805,0,707	0/1:13,7:20:99:352,0,383
chr10	40553445	.	GGCTGGATTAAACTGGCAGTAGCACCCCTTCTTCCA	G	2863.83	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.630;DP=669;FS=0.000;HRun=0;HaplotypeScore=553.0952;InbreedingCoeff=0.9776;MQ=84.26;MQ0=0;MQRankSum=-5.674;QD=98.75;ReadPosRankSum=4.004;VQSLOD=0.5865;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,120,16225	0/0:15,0:15:39.13:0,39,4484	0/0:22,0:22:40.44:0,40,1415	0/0:22,0:22:57.17:0,57,2630	0/0:25,0:25:69.24:0,69,8420	0/0:16,0:16:48.15:0,48,4662	0/0:36,0:36:96.32:0,96,10134	0/0:24,0:24:69.24:0,69,5826	0/0:26,0:26:78.27:0,78,10167	0/0:23,0:23:63.21:0,63,7759	0/0:16,0:16:45.15:0,45,6092	0/0:34,0:34:96.28:0,96,11442	1/1:9,9:18:21.07:1898,21,0	1/1:5,6:11:12.04:1081,12,0	0/0:34,0:34:96.32:0,96,11692	0/0:19,0:19:57.20:0,57,7027	0/0:27,0:27:72.25:0,72,7860	0/0:24,0:24:69.24:0,69,9359	0/0:20,0:20:45.15:0,45,3752	0/0:18,0:18:54.19:0,54,6371	0/0:51,0:51:99:0,138,16962	0/0:29,0:29:75.26:0,75,8968	0/0:17,0:17:48.15:0,48,5418	0/0:19,0:19:57.20:0,57,7575	0/0:26,0:26:78.27:0,78,11027	0/0:25,0:25:69.24:0,69,8710	0/0:25,0:25:72.25:0,72,9892	0/0:6,0:6:18.06:0,18,2384
chr10	40554284	.	T	TTA	821.74	PASS	AB=0.831;AC=17;AF=0.531;AN=32;BaseQRankSum=-4.067;DP=163;FS=0.000;HRun=0;HaplotypeScore=34.5748;InbreedingCoeff=0.2601;MQ=89.40;MQ0=1;MQRankSum=0.425;QD=8.22;ReadPosRankSum=-0.425;VQSLOD=2.4844;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	./.	1/1:11,0:7:2.04:6,2,0	0/0:15,0:10:4.03:0,4,16	0/0:5,0:5:8.85:0,9,58	./.	./.	1/1:12,0:12:3:27,3,0	0/1:2,0:2:0:0,0,0	1/1:3,1:4:3.48:48,3,0	0/1:1,3:4:5.70:129,0,6	./.	0/1:4,0:4:0:0,0,0	1/1:1,2:3:3.01:47,3,0	0/0:6,0:6:8.77:0,9,51	0/0:5,0:5:5.76:0,6,31	0/1:21,1:22:8.98:9,0,168	0/1:10,15:25:4.97:519,0,5	1/1:6,0:6:1.25:3,1,0	./.	./.	./.	./.	./.	1/1:4,3:7:9.03:141,9,0	./.	./.	0/0:1,0:1:2.96:0,3,19
chr10	40554305	.	TAC	T	1128.35	PASS	AB=1.000;AC=31;AF=0.738;AN=42;BaseQRankSum=-2.070;DP=159;FS=0.000;HRun=0;HaplotypeScore=44.2688;InbreedingCoeff=0.1173;MQ=91.75;MQ0=3;MQRankSum=-1.476;QD=10.17;ReadPosRankSum=-1.625;VQSLOD=2.8849;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	1/1:1,0:1:3:25,3,0	0/0:15,0:8:4.85:0,5,50	0/0:21,0:11:10.77:0,11,96	1/1:1,4:5:6.02:85,6,0	./.	0/0:5,0:5:14.92:0,15,137	0/1:7,0:7:2.27:68,0,2	0/1:5,0:5:9.95:10,0,81	1/1:4,0:4:3.88:68,4,0	0/1:6,0:6:15.15:39,0,15	./.	1/1:5,0:5:8.99:75,9,0	1/1:4,0:4:2.11:24,2,0	1/1:2,3:5:15.02:178,15,0	1/1:2,1:3:6:67,6,0	1/1:4,16:20:4.66:399,5,0	0/1:23,0:23:22.74:23,0,80	1/1:2,0:2:5.99:50,6,0	./.	./.	./.	1/1:4,0:4:3:25,3,0	1/1:5,0:5:2.99:23,3,0	1/1:4,0:4:0.86:22,1,0	./.	1/1:3,0:3:5.95:43,6,0	0/1:5,0:4:13.27:36,0,13
chr10	40554388	.	A	ATG	504.05	PASS	AB=0.896;AC=15;AF=0.326;AN=46;BaseQRankSum=-3.689;DP=501;FS=6.623;HRun=0;HaplotypeScore=84.3013;InbreedingCoeff=0.0945;MQ=62.96;MQ0=31;MQRankSum=1.339;QD=2.93;ReadPosRankSum=1.538;VQSLOD=0.5790;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:17:3:29,3,0	./.	./.	./.	0/0:15,0:17:2.80:0,3,14	1/1:11,2:13:3.01:45,3,0	0/0:18,0:19:26.84:0,27,273	./.	0/0:10,0:10:6.02:0,6,65	0/0:15,0:18:3.73:0,4,16	0/0:7,0:10:9.41:0,9,44	0/0:12,0:18:11.29:0,11,55	0/1:11,2:13:23.59:80,0,24	1/1:2,7:9:9.03:134,9,0	0/0:9,0:16:16.12:0,16,82	0/1:5,0:9:4.26:4,0,20	0/0:26,0:30:36.97:0,37,197	0/0:12,0:19:19.84:0,20,97	./.	0/1:10,3:12:26.61:39,0,27	0/1:38,6:43:20.99:21,0,151	0/1:14,0:14:20.51:92,0,21	0/0:13,0:14:2.77:0,3,15	0/0:12,0:16:5.68:0,6,28	0/0:10,0:15:8.52:0,9,42	1/1:6,3:8:6.91:91,7,0	0/1:7,2:9:26.61:39,0,27	0/1:15,2:17:23.60:73,0,24
chr10	40555090	.	TTGC	T	11654.93	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=6.765;DP=657;FS=0.455;HRun=0;HaplotypeScore=97.5806;InbreedingCoeff=0.9127;MQ=76.44;MQ0=3;MQRankSum=-5.048;QD=22.54;ReadPosRankSum=4.192;VQSLOD=4.8476;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:18,20:38:54.11:751,54,0	1/1:2,5:7:12.04:173,12,0	0/0:39,0:34:41.96:0,42,693	0/0:32,0:28:63.21:0,63,1141	1/1:13,0:13:3:25,3,0	0/0:17,0:17:30.10:0,30,612	0/0:27,0:27:57.18:0,57,1124	1/1:8,12:20:36.10:499,36,0	0/0:25,0:25:57.18:0,57,1123	1/1:15,14:29:42.07:561,42,0	1/1:2,5:7:8.99:106,9,0	1/1:4,21:25:48.16:690,48,0	1/1:6,17:23:51.17:734,51,0	1/1:7,21:28:60.16:863,60,0	1/1:4,21:26:54.18:777,54,0	1/1:2,11:13:24.08:345,24,0	1/1:9,28:37:66.22:949,66,0	1/1:5,26:31:69.23:993,69,0	1/1:8,12:20:36.08:461,36,0	1/1:14,7:21:18.06:259,18,0	1/1:11,22:33:50.51:708,51,0	1/1:11,10:21:12.04:173,12,0	1/1:5,4:9:9.03:130,9,0	1/1:11,24:35:57.19:820,57,0	1/1:9,5:14:11.97:147,12,0	1/1:11,10:21:27.08:370,27,0	1/1:10,18:28:51.17:734,51,0	1/1:8,10:18:27.09:388,27,0
chr10	40556565	.	C	CT	1323.31	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-6.764;DP=451;FS=0.580;HRun=8;HaplotypeScore=50.5295;InbreedingCoeff=0.9365;MQ=72.73;MQ0=1;MQRankSum=0.259;QD=22.82;ReadPosRankSum=-0.310;VQSLOD=3.6518;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:89.07:0,89,802	0/0:5,0:5:12:0,12,110	0/0:17,0:17:10.48:0,10,152	0/0:18,0:11:10.94:0,11,78	0/0:12,0:12:33.01:0,33,302	1/1:0,13:13:30.09:346,30,0	1/1:3,22:26:57:635,57,0	0/0:30,0:30:80.96:0,81,720	1/1:1,18:19:42.12:485,42,0	0/0:17,0:17:42.01:0,42,382	0/0:12,0:12:36.01:0,36,325	0/0:16,0:16:45.02:0,45,412	0/0:8,0:8:18:0,18,160	0/0:11,0:11:30.02:0,30,275	0/0:21,0:21:60.03:0,60,549	0/0:13,0:13:36.02:0,36,329	0/0:37,0:37:96.04:0,96,878	0/0:14,0:14:35.97:0,36,321	0/0:27,0:27:69.01:0,69,624	0/0:5,0:5:15.01:0,15,137	0/0:7,0:7:18.01:0,18,165	0/0:4,0:4:12.01:0,12,110	0/0:9,0:9:21.01:0,21,191	0/0:14,0:14:36.02:0,36,329	0/0:11,0:11:30:0,30,270	0/0:17,0:17:51.01:0,51,460	0/0:18,0:18:47.97:0,48,431	0/0:11,0:11:21:0,21,192
chr10	40556769	.	TTGTGTGTGTGTGTGTGTGTGTG	T	2279.31	PASS	AC=6;AF=0.115;AN=52;BaseQRankSum=3.988;DP=526;FS=2.295;HRun=0;HaplotypeScore=255.5850;InbreedingCoeff=0.7707;MQ=51.37;MQ0=18;MQRankSum=-4.454;QD=41.44;ReadPosRankSum=1.103;VQSLOD=2.7478;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:34:21.54:0,22,1221	0/0:8,0:8:6.02:0,6,336	./.	./.	0/0:16,0:17:18.03:0,18,656	1/1:7,9:15:18.06:1045,18,0	1/1:17,4:21:11.87:536,12,0	0/0:29,0:27:31.92:0,32,1171	1/1:8,7:17:15.05:830,15,0	0/0:22,0:21:42.14:0,42,2505	0/0:12,0:10:12.04:0,12,959	0/0:32,0:29:39.61:0,40,2376	0/0:13,0:13:29.31:0,29,1254	0/0:6,0:7:6.02:0,6,310	0/0:17,0:17:19.88:0,20,782	0/0:13,0:12:8.39:0,8,659	0/0:19,0:17:24.08:0,24,1192	0/0:20,0:20:33.11:0,33,2271	0/0:23,0:21:29.46:0,29,1091	0/0:13,0:12:9.03:0,9,424	0/0:33,0:32:29.89:0,30,2309	0/0:15,0:15:9.03:0,9,366	0/0:16,0:13:12.04:0,12,411	0/0:21,0:24:17.62:0,18,883	0/0:11,0:13:12.04:0,12,816	0/0:27,0:26:44.82:0,45,2549	0/0:15,0:13:33.11:0,33,1451	0/0:4,0:1:3.01:0,3,169
chr10	40556898	.	AG	A	844.84	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=5.322;DP=510;FS=8.286;HRun=8;HaplotypeScore=52.5037;InbreedingCoeff=0.9847;MQ=81.30;MQ0=0;MQRankSum=-3.488;QD=18.37;ReadPosRankSum=4.630;VQSLOD=3.0151;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:96.23:0,96,1116	0/0:9,0:9:24.07:0,24,290	0/0:24,0:23:42.09:0,42,491	0/0:25,0:23:62.77:0,63,693	0/0:6,0:6:15.04:0,15,178	0/0:14,0:14:33.10:0,33,398	0/0:34,0:34:87.26:0,87,1042	0/0:23,0:23:45.12:0,45,531	0/0:17,0:17:42.12:0,42,497	0/0:21,0:21:60.18:0,60,720	0/0:16,0:17:44.97:0,45,521	1/1:1,25:26:66.10:637,66,0	0/0:17,0:17:51.14:0,51,604	0/0:9,0:9:27.08:0,27,316	0/0:13,0:13:39.11:0,39,456	0/0:14,0:14:38.99:0,39,448	0/0:25,0:25:72.18:0,72,835	0/0:17,0:17:51.05:0,51,560	0/0:13,0:13:36.09:0,36,418	0/0:14,0:14:36.11:0,36,432	0/0:47,0:47:99:0,111,1300	0/0:18,0:18:51.14:0,51,595	1/1:0,6:6:15.02:145,15,0	1/1:2,12:14:21.03:203,21,0	0/0:20,0:20:57.14:0,57,664	0/0:9,0:10:26.95:0,27,305	0/0:13,0:13:36.11:0,36,434	0/0:9,0:9:24.07:0,24,290
chr10	40558279	.	TCA	T	2682.11	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.724;DP=649;FS=0.451;HRun=0;HaplotypeScore=90.2541;InbreedingCoeff=0.9958;MQ=75.31;MQ0=0;MQRankSum=0.612;QD=29.47;ReadPosRankSum=0.758;VQSLOD=4.6688;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:87.23:0,87,1392	0/0:12,0:12:36.09:0,36,541	0/0:32,0:30:65.26:0,65,942	0/0:34,0:32:57.86:0,58,786	0/0:20,0:20:51.17:0,51,845	1/1:0,22:22:57.18:725,57,0	1/1:3,38:41:99:1375,108,0	0/0:22,0:22:60.19:0,60,977	1/1:3,25:28:57.18:725,57,0	0/0:35,0:35:90.29:0,90,1438	0/0:11,0:11:30.09:0,30,474	0/0:22,0:22:66.23:0,66,1102	0/0:25,0:25:60.17:0,60,961	0/0:32,0:32:87.21:0,87,1292	0/0:25,0:25:66.23:0,66,1100	0/0:25,1:26:28.02:0,28,976	0/0:25,0:25:66.21:0,66,1066	0/0:17,0:17:39.13:0,39,645	0/0:8,0:8:18.06:0,18,301	0/0:16,0:16:39.12:0,39,613	0/0:32,0:32:84.27:0,84,1369	0/0:16,0:16:45.15:0,45,753	0/0:17,0:17:51.17:0,51,847	0/0:34,0:34:87.24:0,87,1361	0/0:10,0:10:27.09:0,27,452	0/0:19,0:18:51.17:0,51,854	0/0:21,0:21:60.21:0,60,1003	0/0:10,0:10:27.09:0,27,451
chr10	40558477	.	A	AGAGGAG	5859.95	PASS	AB=0.972;AC=24;AF=0.429;AN=56;BaseQRankSum=-7.798;DP=690;FS=4.552;HRun=0;HaplotypeScore=256.9451;InbreedingCoeff=-0.6101;MQ=54.04;MQ0=17;MQRankSum=-0.935;QD=10.28;ReadPosRankSum=-3.506;VQSLOD=3.0538;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:34,0:34:58.33:58,0,307	0/1:7,0:7:29.24:29,0,39	0/0:9,0:4:8.90:0,9,75	0/0:19,0:5:2.19:0,2,60	0/1:25,0:25:99:217,0,174	0/0:21,0:21:54.14:0,54,1046	0/0:44,0:43:99:0,104,2065	0/1:22,0:15:61.18:97,0,61	0/0:26,0:26:71.25:0,71,1374	0/1:25,0:25:99:106,0,101	0/1:11,0:11:33.78:155,0,34	0/1:33,11:44:7.16:1705,0,7	0/1:27,0:26:99:340,0,131	0/1:32,0:32:99:223,0,160	0/1:24,0:24:99:175,0,170	0/1:30,0:30:99:178,0,297	0/1:40,0:40:99:171,0,389	0/1:27,0:26:49.01:49,0,234	0/1:7,0:7:28.23:28,0,29	0/1:22,0:22:94.37:211,0,94	0/1:48,0:48:99:291,0,271	0/1:22,0:21:89.57:90,0,167	0/1:5,11:15:20.61:518,0,21	1/1:26,3:28:16.91:699,17,0	0/1:16,0:16:91.46:153,0,91	0/1:31,0:31:82.75:343,0,83	0/1:24,0:24:16.82:17,0,319	0/1:7,0:7:8.32:8,0,37
chr10	40558513	.	GGAT	G	507.09	PASS	AB=0.869;AC=5;AF=0.089;AN=56;BaseQRankSum=6.350;DP=694;FS=16.185;HRun=0;HaplotypeScore=212.3337;InbreedingCoeff=-0.0971;MQ=52.77;MQ0=23;MQRankSum=-9.224;QD=4.19;ReadPosRankSum=-4.592;VQSLOD=0.5728;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:95.88:0,96,2030	0/0:8,0:8:15.05:0,15,332	0/0:43,0:9:23.66:0,24,409	0/0:40,0:13:38.77:0,39,635	0/0:18,0:18:28.19:0,28,900	0/0:22,0:22:63.20:0,63,1364	0/0:37,0:36:99:0,108,2060	0/1:20,1:21:20.83:21,0,592	0/0:22,0:22:66.18:0,66,1367	0/0:22,0:21:63.22:0,63,1311	0/0:7,0:7:13.27:0,13,217	0/1:29,9:38:99:301,0,1260	0/0:18,0:17:48.14:0,48,984	0/0:27,0:27:78.24:0,78,1576	0/0:22,0:22:66.20:0,66,1354	0/0:29,0:29:83.04:0,83,1815	0/0:42,0:42:82.95:0,83,2332	0/0:26,0:25:30.48:0,30,1375	0/1:16,1:16:8.13:8,0,733	0/0:13,0:13:31.31:0,31,659	0/0:52,1:53:99:0,99,2628	0/0:18,0:18:54.15:0,54,1084	0/1:6,6:11:99:167,0,171	0/1:32,1:32:99:124,0,1080	0/0:18,0:18:51.17:0,51,1072	0/0:22,0:22:65.24:0,65,1277	0/0:24,0:24:69.18:0,69,1313	0/0:9,0:9:18.06:0,18,389
chr10	40559029	.	CCTAA	C	19261.35	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=15.062;DP=688;FS=0.299;HRun=0;HaplotypeScore=127.1741;InbreedingCoeff=0.9997;MQ=74.05;MQ0=2;MQRankSum=-6.530;QD=45.75;ReadPosRankSum=4.183;VQSLOD=5.5976;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,20:26:51.17:943,51,0	1/1:2,9:11:27.09:504,27,0	0/0:20,0:20:60.19:0,60,1484	0/0:21,0:21:53.91:0,54,1083	1/1:2,30:32:81.23:1475,81,0	0/0:12,0:12:33.11:0,33,848	0/0:30,0:30:81.26:0,81,2075	1/1:4,22:26:66.22:1193,66,0	0/0:37,0:37:84.36:0,84,2720	1/1:3,25:28:78.25:1407,78,0	1/1:0,20:20:48.16:888,48,0	0/0:28,0:28:84.27:0,84,2161	0/0:25,0:25:72.23:0,72,1846	0/0:25,0:25:69.20:0,69,1721	1/1:0,26:26:72.25:1338,72,0	1/1:2,16:18:39.13:724,39,0	1/1:2,32:34:75.26:1400,75,0	1/1:5,29:33:34.30:1353,34,0	1/1:2,11:13:33.10:580,33,0	1/1:2,19:21:45.15:821,45,0	1/1:1,20:21:54.19:1001,54,0	1/1:2,28:29:75.26:1399,75,0	0/0:36,0:36:99:0,102,2591	0/0:33,0:33:93.30:0,93,2382	1/1:1,19:20:57.20:1060,57,0	1/1:1,25:26:75.22:1327,75,0	1/1:0,23:23:62.95:1175,63,0	1/1:0,12:12:36.12:672,36,0
chr10	40559342	.	CTG	C	3050.56	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.625;DP=745;FS=2.023;HRun=0;HaplotypeScore=120.1854;InbreedingCoeff=0.9996;MQ=89.38;MQ0=0;MQRankSum=-0.945;QD=35.47;ReadPosRankSum=3.446;VQSLOD=5.5989;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,126,2232	0/0:12,0:12:36.12:0,36,647	0/0:33,0:33:81.28:0,81,1436	0/0:27,0:27:66.17:0,66,1064	0/0:21,0:21:60.19:0,60,1046	0/0:21,0:21:57.20:0,57,1027	0/0:28,0:28:78.27:0,78,1398	0/0:29,0:29:87.30:0,87,1564	0/0:29,0:29:81.28:0,81,1446	0/0:41,0:41:99:0,120,2145	0/0:23,0:23:66.21:0,66,1145	1/1:1,26:27:72.24:1008,72,0	0/0:28,0:28:81.28:0,81,1440	0/0:28,0:28:78.27:0,78,1388	0/0:25,0:25:75.26:0,75,1351	0/0:21,0:21:63.22:0,63,1116	0/0:31,0:30:90.31:0,90,1620	0/0:26,0:26:72.25:0,72,1283	0/0:24,0:24:63.22:0,63,1116	0/0:22,0:22:63.19:0,63,1076	0/0:43,0:43:99:0,123,2188	0/0:23,0:23:63.22:0,63,1115	1/1:1,25:26:75.25:1051,75,0	1/1:4,29:33:81.27:1134,81,0	0/0:21,0:21:57.20:0,57,1019	0/0:22,0:22:66.23:0,66,1186	0/0:22,0:22:57.19:0,57,1012	0/0:9,0:9:27.09:0,27,486
chr10	40559804	.	C	CATCA	2970.97	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-6.555;DP=623;FS=2.844;HRun=0;HaplotypeScore=105.5781;InbreedingCoeff=0.9993;MQ=74.71;MQ0=0;MQRankSum=-1.687;QD=52.12;ReadPosRankSum=2.320;VQSLOD=4.4692;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:96.27:0,96,1660	0/0:10,0:10:30.10:0,30,552	0/0:28,0:28:66.22:0,66,1139	0/0:23,0:22:27.52:0,28,564	0/0:19,0:19:51.17:0,51,938	0/0:16,0:16:42.14:0,42,772	0/0:29,0:29:75.26:0,75,1379	0/0:40,0:40:99:0,105,1719	0/0:16,0:15:42.14:0,42,755	0/0:27,0:27:69.23:0,69,1209	0/0:20,0:20:57.15:0,57,984	1/1:3,13:16:36.12:948,36,0	0/0:17,0:17:48.13:0,48,812	0/0:16,0:16:42.10:0,42,709	0/0:17,0:17:45.14:0,45,795	0/0:14,0:14:39.11:0,39,658	0/0:36,0:36:99:0,102,1876	0/0:16,0:16:45.15:0,45,828	0/0:19,0:19:54.13:0,54,900	0/0:18,0:18:54.17:0,54,963	0/0:23,0:23:57.20:0,57,1047	0/0:29,0:29:81.18:0,81,1377	1/1:3,15:20:39.13:981,39,0	1/1:1,17:21:45.15:1185,45,0	0/0:22,0:22:63.18:0,63,1061	0/0:37,0:36:99:0,102,1805	0/0:23,0:23:63.17:0,63,1046	0/0:12,0:12:36.12:0,36,662
chr10	40559931	.	TCACACACACA	T	32.34	PASS	AB=0.980;AC=7;AF=0.140;AN=50;BaseQRankSum=3.450;DP=396;FS=1.291;HRun=0;HaplotypeScore=134.6827;InbreedingCoeff=0.1907;MQ=44.48;MQ0=24;MQRankSum=-1.127;QD=0.53;ReadPosRankSum=-1.496;VQSLOD=2.4457;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:23:26.25:0,26,361	0/0:3,0:3:6.02:0,6,112	./.	./.	0/0:13,0:11:3.01:0,3,129	0/0:22,0:22:9.03:0,9,390	0/0:32,0:29:18.51:0,19,641	0/0:16,0:15:14.88:0,15,183	0/0:11,0:11:6.02:0,6,193	0/0:19,0:19:35.66:0,36,634	0/0:16,0:15:21.07:0,21,536	1/1:6,2:7:2.84:87,3,0	0/0:9,0:6:15.04:0,15,382	0/0:11,0:10:15.05:0,15,422	0/0:13,0:11:18.06:0,18,756	0/0:11,0:8:14.72:0,15,501	0/0:29,0:28:48.16:0,48,1642	0/0:17,0:15:29.93:0,30,456	0/1:14,0:14:4.42:4,0,209	0/0:10,0:10:12.50:0,12,138	0/1:15,0:13:28.25:28,0,164	0/0:14,0:13:11.14:0,11,174	1/1:6,7:14:0.94:2,1,0	./.	0/0:6,0:6:6.02:0,6,151	0/0:18,0:17:23.05:0,23,504	0/0:16,0:17:6.01:0,6,298	0/1:9,0:9:13.67:14,0,69
chr10	40559988	.	TACACACAC	T	4728.75	PASS	AB=0.777;AC=36;AF=0.667;AN=54;BaseQRankSum=3.400;DP=529;FS=0.783;HRun=0;HaplotypeScore=197.4046;InbreedingCoeff=0.4586;MQ=48.73;MQ0=21;MQRankSum=-3.204;QD=14.37;ReadPosRankSum=0.868;VQSLOD=4.1314;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:21,6:27:6.49:151,6,0	0/1:3,0:9:14.49:32,0,14	./.	0/0:45,0:15:0:0,0,0	1/1:6,1:22:17.72:152,18,0	0/0:19,0:19:3.01:0,3,91	0/0:20,0:19:20.88:0,21,452	1/1:25,0:22:2.91:54,3,0	0/0:10,0:10:8.69:0,9,82	0/1:15,0:21:51.39:111,0,51	1/1:7,0:13:8.95:66,9,0	0/0:18,0:17:9.03:0,9,224	1/1:3,9:12:24.08:602,24,0	0/1:8,4:12:20.48:263,0,20	1/1:7,0:11:4.17:59,4,0	1/1:4,0:10:9.79:63,10,0	1/1:15,0:21:8.96:68,9,0	1/1:8,0:7:1.34:4,1,0	1/1:12,7:18:17.99:349,18,0	1/1:11,7:18:18.92:370,19,0	0/1:21,0:20:15.13:15,0,98	1/1:6,9:15:14.86:359,15,0	0/0:20,0:20:17.93:0,18,578	0/0:15,0:15:11.23:0,11,238	1/1:7,0:14:26.78:184,27,0	1/1:13,13:26:50.19:1157,50,0	1/1:8,6:14:17.39:368,17,0	1/1:3,4:7:12.04:301,12,0
chr10	40559992	.	C	CACACACACAT	1587.59	PASS	AB=0.951;AC=19;AF=0.339;AN=56;BaseQRankSum=-7.816;DP=539;FS=0.000;HRun=0;HaplotypeScore=228.4303;InbreedingCoeff=0.0546;MQ=47.09;MQ0=23;MQRankSum=3.464;QD=5.46;ReadPosRankSum=0.887;VQSLOD=2.4743;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:29:65.64:72,0,66	0/0:9,0:9:12.93:0,13,194	0/0:45,0:18:26.62:0,27,224	0/0:46,0:15:11.64:0,12,97	0/0:22,0:22:18.92:0,19,239	0/1:6,10:21:8.97:148,0,9	1/1:20,0:19:0.97:255,1,0	1/1:27,0:23:47.73:391,48,0	1/1:4,7:18:1.74:152,2,0	0/0:21,0:20:50.75:0,51,587	0/0:13,0:13:17.98:0,18,242	0/1:18,0:17:48.32:143,0,48	0/0:10,0:10:23.97:0,24,480	0/0:11,0:11:24.63:0,25,305	0/0:13,0:13:26.56:0,27,317	0/0:9,0:9:12.01:0,12,166	0/0:21,0:21:44.66:0,45,462	0/1:9,0:8:26.19:26,0,112	0/1:18,0:17:81.29:120,0,81	0/1:19,0:18:72.24:72,0,134	1/1:20,0:19:27.48:194,27,0	0/1:15,0:15:13.90:14,0,92	0/1:20,0:20:17.90:18,0,20	0/1:12,0:14:3.37:3,0,12	0/0:15,0:14:36.45:0,36,650	0/1:28,0:27:99:104,0,665	0/1:14,0:14:44.92:45,0,115	0/0:7,0:7:9.70:0,10,168
chr10	40561230	.	A	AG	10885.29	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-10.528;DP=412;FS=7.060;HRun=1;HaplotypeScore=40.2868;InbreedingCoeff=0.9861;MQ=72.74;MQ0=2;MQRankSum=-0.506;QD=36.41;ReadPosRankSum=1.772;VQSLOD=4.5484;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,39:40:96.33:1433,96,0	1/1:0,6:6:15.05:224,15,0	0/0:18,0:17:37.33:0,37,419	0/0:14,0:11:23.56:0,24,239	1/1:0,13:13:29.99:419,30,0	0/0:10,0:10:30.10:0,30,387	0/0:15,0:15:42.13:0,42,531	1/1:3,20:23:60.03:751,60,0	0/0:14,0:14:42.11:0,42,514	1/1:0,23:23:69.11:949,69,0	1/1:1,14:15:36.12:537,36,0	0/0:8,0:8:24.07:0,24,300	1/1:1,12:13:36.12:537,36,0	1/1:0,8:8:21.07:305,21,0	1/1:0,14:14:39.13:583,39,0	1/1:0,12:12:30.10:448,30,0	1/1:1,22:23:60.16:870,60,0	1/1:1,11:12:12.13:427,12,0	1/1:3,8:10:24.04:317,24,0	1/1:2,13:15:36.12:536,36,0	1/1:1,12:13:27.05:403,27,0	1/1:0,18:18:48.16:705,48,0	0/0:16,0:16:45.08:0,45,536	0/0:18,0:18:51.13:0,51,617	1/1:0,10:10:21.07:312,21,0	1/1:0,15:15:45.11:647,45,0	1/1:1,8:9:20.92:259,21,0	1/1:0,6:6:15.05:222,15,0
chr10	40562084	.	G	GTGTC	34703.87	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-11.730;DP=689;FS=9.187;HRun=0;HaplotypeScore=105.4015;InbreedingCoeff=0.9967;MQ=82.29;MQ0=1;MQRankSum=-9.557;QD=61.86;ReadPosRankSum=3.434;VQSLOD=6.8013;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,37:44:87.30:2312,87,0	1/1:2,6:9:18.06:479,18,0	0/0:16,0:16:42.13:0,42,738	0/0:31,0:31:87.18:0,87,1416	1/1:4,15:19:29.95:755,30,0	1/1:0,15:16:45.15:1189,45,0	1/1:5,23:30:66.23:1721,66,0	1/1:18,20:39:99:2757,107,0	1/1:0,22:21:57.20:1519,57,0	1/1:3,21:24:69.22:1729,69,0	1/1:4,8:13:20.94:553,21,0	0/0:24,0:24:66.21:0,66,1199	1/1:2,18:22:54.19:1423,54,0	1/1:1,17:20:47.73:1279,48,0	1/1:1,26:28:69.24:1839,69,0	1/1:2,19:21:57.20:1497,57,0	1/1:4,19:26:60.68:1569,61,0	1/1:1,16:18:45.15:1200,45,0	1/1:10,9:21:52.99:1225,53,0	1/1:3,19:22:45.15:1190,45,0	1/1:6,39:48:87.30:2319,87,0	1/1:2,21:23:54.05:1420,54,0	0/0:23,0:23:66.19:0,66,1167	0/0:34,0:34:99:0,99,1814	1/1:2,8:12:27.09:711,27,0	1/1:1,30:34:99:2583,102,0	1/1:3,33:36:96.33:2555,96,0	1/1:0,12:13:33.11:879,33,0
chr10	40562853	.	CATA	C	6372	PASS	AB=0.754;AC=29;AF=0.518;AN=56;BaseQRankSum=14.065;DP=681;FS=12.742;HRun=0;HaplotypeScore=256.6352;InbreedingCoeff=-0.0989;MQ=43.91;MQ0=11;MQRankSum=-10.996;QD=13.91;ReadPosRankSum=2.678;VQSLOD=2.9583;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:16,23:37:49.24:269,0,49	0/1:3,1:4:32.98:44,0,33	0/0:55,0:37:97.45:0,97,2089	0/0:49,0:30:83.65:0,84,1818	1/1:15,5:17:2.85:118,3,0	1/1:23,2:24:38.77:355,39,0	0/1:19,11:30:59.93:313,0,60	0/1:20,6:24:99:293,0,355	0/1:13,6:18:9.39:132,0,9	0/1:12,5:16:36.32:411,0,36	1/1:10,4:13:11.92:131,12,0	0/0:29,0:29:87.30:0,87,1957	1/1:24,5:29:53.35:664,53,0	1/1:11,4:15:11.65:112,12,0	0/1:16,11:25:3.99:383,0,4	0/1:9,9:18:22.92:137,0,23	0/1:16,3:18:31.38:224,0,31	0/1:13,6:18:99:271,0,178	0/1:8,3:11:99:204,0,179	1/1:10,9:19:24.02:300,24,0	0/0:9,15:24:0.62:0,1,1	0/1:9,18:27:17:225,0,17	0/0:19,0:19:57.15:0,57,1217	0/0:46,0:45:99:0,135,3176	0/1:18,3:21:10.91:336,0,11	0/1:12,5:17:86.68:544,0,87	0/1:21,9:29:80.55:539,0,81	1/1:6,6:12:29.53:367,30,0
chr10	40562854	.	AT	A	4693.22	PASS	AB=0.920;AC=31;AF=0.554;AN=56;BaseQRankSum=14.484;DP=655;FS=17.536;HRun=1;HaplotypeScore=244.0515;InbreedingCoeff=-0.0432;MQ=43.91;MQ0=11;MQRankSum=-11.704;QD=10.27;ReadPosRankSum=3.333;VQSLOD=0.8593;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:37,1:36:44.44:168,0,44	0/1:3,1:4:23.79:24,0,32	0/0:53,1:36:98.53:0,99,1519	0/0:50,0:30:83.86:0,84,1280	1/1:18,2:17:3.40:94,3,0	1/1:24,1:24:31.55:290,32,0	0/1:23,6:29:70.14:183,0,70	0/1:17,2:17:99:182,0,226	0/1:17,1:17:11.81:112,0,12	0/1:14,1:14:11.40:275,0,11	1/1:10,4:13:11.11:74,11,0	0/0:29,0:29:87.29:0,87,1346	1/1:25,3:28:57.82:547,58,0	1/1:14,0:14:12.01:124,12,0	0/1:22,4:24:8.36:250,0,8	0/1:16,1:17:22.42:125,0,22	1/1:16,3:18:21.37:219,21,0	0/1:16,2:17:99:209,0,105	0/1:11,0:11:99:156,0,114	1/1:18,0:18:23.96:225,24,0	0/1:19,0:19:0.09:0,0,0	0/1:25,1:26:17.73:105,0,18	0/0:19,0:19:54.17:0,54,823	0/0:46,0:45:99:0,135,2151	0/1:18,2:20:11.20:184,0,11	0/1:14,3:17:38.04:422,0,38	0/1:29,1:28:60.03:445,0,60	1/1:12,0:12:29.69:280,30,0
chr10	40562856	.	A	ACACACA	3496.39	PASS	AB=0.718;AC=29;AF=0.518;AN=56;BaseQRankSum=13.230;DP=685;FS=19.377;HRun=0;HaplotypeScore=298.7336;InbreedingCoeff=-0.1620;MQ=44.62;MQ0=11;MQRankSum=-10.464;QD=7.58;ReadPosRankSum=1.674;VQSLOD=1.0022;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:38:72.50:73,0,76	0/1:2,0:4:32.79:48,0,33	0/0:52,0:34:75.64:0,76,1754	0/0:53,0:32:75.75:0,76,1528	1/1:8,0:16:3.35:37,3,0	0/1:8,0:26:22.23:213,0,22	0/1:19,0:29:99:194,0,146	0/1:20,0:21:28.52:29,0,259	0/1:8,0:17:21.50:90,0,21	0/1:12,0:18:55.88:271,0,56	1/1:8,0:14:11.86:132,12,0	0/0:29,0:29:87.20:0,87,1900	1/1:8,0:28:39.12:444,39,0	1/1:6,0:16:11.73:90,12,0	0/1:17,0:24:42.95:253,0,43	0/1:12,0:19:28.40:67,0,28	1/1:10,0:18:14.12:126,14,0	0/1:13,0:17:99:257,0,190	0/1:8,0:12:99:156,0,164	1/1:10,0:18:4.26:60,4,0	0/0:20,0:22:0.43:0,0,1	0/1:20,0:27:24.06:24,0,39	0/0:21,0:21:53.92:0,54,1074	0/0:46,0:46:99:0,135,3203	0/1:8,1:23:13.41:222,0,13	0/1:11,0:18:61.83:324,0,62	0/1:13,0:29:44.83:195,0,45	1/1:6,0:12:5.24:194,5,0
chr10	40562882	.	C	CAA	7298.11	PASS	AB=0.881;AC=37;AF=0.661;AN=56;BaseQRankSum=2.366;DP=723;FS=41.573;HRun=1;HaplotypeScore=247.2850;InbreedingCoeff=0.2720;MQ=46.46;MQ0=13;MQRankSum=-4.074;QD=13.54;ReadPosRankSum=-3.198;VQSLOD=-0.3603;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:46,0:47:19.15:420,19,0	1/1:5,0:6:12.03:147,12,0	0/0:46,0:21:60.74:0,61,747	0/0:49,0:26:56.31:0,56,686	1/1:27,0:26:39.87:428,40,0	1/1:19,9:28:56.57:581,57,0	1/1:24,4:28:2.42:361,2,0	0/1:37,0:34:67.97:577,0,68	1/1:14,6:19:45.03:515,45,0	0/1:25,1:29:5.41:534,0,5	1/1:15,0:16:31.43:258,31,0	0/0:24,0:24:69.18:0,69,970	0/1:24,0:26:54.94:263,0,55	1/1:15,0:16:15.49:147,15,0	1/1:21,0:21:11.13:221,11,0	1/1:18,1:21:21.23:287,21,0	1/1:17,0:17:13.03:239,13,0	0/1:13,2:18:44.23:236,0,44	0/1:21,0:24:27.77:410,0,28	0/1:9,0:12:36.72:37,0,51	1/1:21,1:22:21.23:147,21,0	1/1:23,1:26:32.34:313,32,0	0/0:23,0:23:60.12:0,60,844	0/0:42,0:41:99:0,126,1772	1/1:20,0:27:46.11:461,46,0	0/1:20,0:21:24.29:325,0,24	0/1:27,0:28:7.33:319,0,7	0/1:8,0:11:14.84:73,0,15
chr10	40563202	.	T	TAA	11256.11	PASS	AB=0.793;AC=52;AF=0.929;AN=56;BaseQRankSum=1.488;DP=566;FS=2.276;HRun=11;HaplotypeScore=192.3801;InbreedingCoeff=0.3888;MQ=62.78;MQ0=2;MQRankSum=-3.889;QD=20.73;ReadPosRankSum=0.194;VQSLOD=2.0958;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,8:21:41.07:475,41,0	1/1:3,2:6:15.01:166,15,0	0/0:23,0:15:7.35:0,7,86	0/1:19,0:16:11.37:11,0,119	1/1:14,11:27:65.68:761,66,0	1/1:10,14:26:65.29:787,65,0	1/1:15,5:20:41.95:463,42,0	1/1:24,12:35:79.51:926,80,0	1/1:9,5:14:35.29:387,35,0	1/1:16,8:25:62.77:720,63,0	1/1:8,6:17:38.05:397,38,0	0/1:7,1:24:16.68:113,0,17	1/1:4,0:7:10.66:51,11,0	1/1:4,0:12:16.47:97,16,0	1/1:7,14:23:63.56:744,64,0	1/1:8,9:17:44.60:561,45,0	1/1:16,7:23:47.15:476,47,0	1/1:14,5:19:42.01:477,42,0	1/1:19,3:23:37.90:388,38,0	1/1:13,5:19:42.81:465,43,0	1/1:6,3:9:11.79:98,12,0	1/1:7,10:18:40.50:486,41,0	1/1:8,0:34:27.85:155,28,0	1/1:3,0:31:64.89:222,65,0	1/1:13,6:19:33.01:408,33,0	1/1:23,4:27:66.02:724,66,0	1/1:8,9:16:47.46:570,47,0	1/1:5,2:7:9.03:126,9,0
chr10	40563214	.	C	CA	5613.74	PASS	AB=0.659;AC=27;AF=0.482;AN=56;BaseQRankSum=4.213;DP=561;FS=15.886;HRun=11;HaplotypeScore=157.9735;InbreedingCoeff=-0.3759;MQ=57.03;MQ0=3;MQRankSum=-6.357;QD=13.02;ReadPosRankSum=1.510;VQSLOD=3.2021;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:11,5:18:35.36:201,0,35	1/1:1,1:5:13.84:132,14,0	0/0:25,0:15:7.94:0,8,196	0/0:21,0:15:0.98:0,1,183	0/1:14,13:31:29.56:381,0,30	0/1:13,3:24:72.01:323,0,72	0/1:6,9:18:5.56:305,0,6	0/1:23,12:34:99:301,0,230	0/1:6,6:14:29.92:177,0,30	0/1:7,14:25:16:438,0,16	0/1:5,4:16:7.34:248,0,7	0/0:23,0:23:55.81:0,56,401	1/1:10,0:11:5.93:22,6,0	0/1:11,0:14:9.80:28,0,10	0/1:12,7:24:99:270,0,123	0/1:8,5:16:54.14:224,0,54	0/1:15,7:24:7.78:386,0,8	0/1:9,7:18:85.92:234,0,86	0/1:11,12:25:35.68:379,0,36	1/1:5,8:18:20.10:392,20,0	0/1:4,4:9:15.36:92,0,15	0/1:5,6:17:33.98:275,0,34	0/0:29,0:29:26.43:0,26,412	0/0:32,0:32:71.04:0,71,489	0/1:9,6:17:75.67:103,0,76	0/1:8,13:22:48.38:411,0,48	0/1:7,7:19:10.04:231,0,10	1/1:8,0:10:6.48:62,6,0
chr10	40564462	.	GAA	G	2450.24	PASS	AB=0.973;AC=30;AF=0.536;AN=56;BaseQRankSum=-1.145;DP=437;FS=12.607;HRun=3;HaplotypeScore=142.4092;InbreedingCoeff=-0.0971;MQ=41.76;MQ0=11;MQRankSum=5.530;QD=6.64;ReadPosRankSum=4.455;VQSLOD=-0.6769;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:16,0:15:9.31:138,0,9	0/1:7,0:7:1.80:39,0,2	0/0:16,0:5:11.90:0,12,122	0/0:15,0:7:16.60:0,17,237	0/1:26,2:29:27.88:221,0,28	1/1:21,0:21:13.18:73,13,0	1/1:16,0:13:14.30:102,14,0	0/1:24,0:22:99:172,0,135	1/1:13,1:13:9.11:78,9,0	0/1:23,0:19:34.04:262,0,34	1/1:20,0:19:4.61:122,5,0	1/1:11,1:12:11.41:118,11,0	0/0:14,0:14:11.74:0,12,232	0/0:15,0:15:23.69:0,24,266	0/1:14,0:12:8.19:61,0,8	0/1:15,0:15:78.23:135,0,78	0/1:12,0:11:36.96:37,0,62	0/1:8,0:8:12.51:13,0,110	1/1:10,0:9:17.11:115,17,0	0/1:26,1:25:64.36:184,0,64	0/0:8,0:6:5.31:0,5,71	0/1:12,0:12:4.19:93,0,4	1/1:13,0:13:13.12:159,13,0	0/1:13,1:13:7.32:15,0,7	0/1:19,0:17:3.38:64,0,3	0/1:18,2:20:47.60:252,0,48	0/1:13,1:14:2.27:132,0,2	0/1:8,0:7:38.94:39,0,55
chr10	40564466	.	GAA	G	2823.74	PASS	AB=0.983;AC=33;AF=0.589;AN=56;BaseQRankSum=-0.273;DP=441;FS=10.309;HRun=3;HaplotypeScore=141.0404;InbreedingCoeff=-0.2188;MQ=39.90;MQ0=11;MQRankSum=6.938;QD=6.96;ReadPosRankSum=4.624;VQSLOD=-0.4408;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:15,0:14:27.35:111,0,27	0/1:7,0:7:0.51:41,0,1	0/0:13,0:3:3.01:0,3,57	0/0:14,0:7:14.19:0,14,219	0/1:28,1:29:22.42:198,0,22	1/1:20,0:20:16.16:95,16,0	1/1:15,0:12:14.30:102,14,0	0/1:22,0:20:83.77:159,0,84	1/1:15,0:14:5.73:51,6,0	0/1:24,0:20:45.37:251,0,45	1/1:19,0:18:11.67:141,12,0	1/1:10,1:11:8.41:93,8,0	1/1:11,2:13:7.46:171,7,0	1/1:15,4:18:28.24:314,28,0	0/1:15,0:13:5.98:62,0,6	0/1:16,0:16:78.28:136,0,78	0/1:11,0:10:21.05:21,0,49	0/1:6,0:6:16.40:16,0,80	0/1:10,0:9:5.17:78,0,5	0/1:26,0:25:4.91:180,0,5	0/0:8,0:6:4.17:0,4,54	0/1:16,0:14:4.32:101,0,4	1/1:13,0:13:17.43:165,17,0	0/1:13,1:13:7.32:15,0,7	0/1:23,0:21:5.22:62,0,5	0/1:20,0:22:2.99:251,0,3	0/1:14,0:14:7.24:126,0,7	0/1:9,0:8:39.91:40,0,56
chr10	40564500	.	G	GGA	598.48	PASS	AB=0.984;AC=17;AF=0.304;AN=56;BaseQRankSum=5.120;DP=545;FS=13.748;HRun=0;HaplotypeScore=159.1171;InbreedingCoeff=-0.2445;MQ=29.01;MQ0=25;MQRankSum=-0.137;QD=2.04;ReadPosRankSum=2.908;VQSLOD=1.9979;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:16,0:15:59.46:59,0,62	0/0:6,0:6:2.42:0,2,42	0/0:53,0:11:21.09:0,21,441	0/0:56,0:6:18.06:0,18,281	0/0:28,0:28:16.07:0,16,114	1/1:25,3:28:8.92:127,9,0	0/1:12,1:8:7.74:8,0,26	0/1:26,0:22:37.75:38,0,336	0/1:17,0:15:4.28:4,0,53	0/0:23,0:20:41.53:0,42,383	0/0:20,0:19:7.75:0,8,37	0/0:8,0:8:4.41:0,4,14	0/1:14,1:14:78.60:79,0,164	0/1:18,0:17:78.79:79,0,109	0/0:18,0:15:3.01:0,3,45	0/0:13,0:13:21.03:0,21,273	0/1:15,0:14:4.97:5,0,95	0/0:7,0:7:6.32:0,6,92	0/1:14,1:14:99:124,0,122	0/1:22,0:21:31.33:31,0,40	0/0:6,0:4:1.91:0,2,7	0/1:20,0:18:50.87:51,0,88	0/1:6,0:6:0:0,0,0	0/1:15,0:14:7.93:23,0,8	0/1:34,0:32:14.28:14,0,48	0/1:18,1:18:59.73:60,0,140	0/1:14,0:12:45.92:46,0,75	0/0:13,1:13:15.55:0,16,133
chr10	40564502	.	G	GGA	4818.92	PASS	AB=0.941;AC=35;AF=0.625;AN=56;BaseQRankSum=5.891;DP=574;FS=16.929;HRun=0;HaplotypeScore=179.9522;InbreedingCoeff=-0.0899;MQ=28.18;MQ0=25;MQRankSum=1.782;QD=11.23;ReadPosRankSum=-0.561;VQSLOD=3.5318;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:19,0:18:14.19:191,0,14	0/1:6,0:6:15.91:60,0,16	0/0:56,0:12:36.09:0,36,460	0/0:56,0:6:18.06:0,18,261	0/1:25,1:26:28.05:71,0,28	1/1:20,4:29:36.92:465,37,0	1/1:14,1:10:9.38:65,9,0	0/1:29,0:25:79.34:278,0,79	0/1:14,2:15:14.66:127,0,15	0/1:18,3:18:65.72:188,0,66	1/1:19,1:19:13.27:117,13,0	1/1:8,0:8:5.10:22,5,0	0/1:11,1:14:6.36:417,0,6	1/1:15,1:17:29.49:373,29,0	0/0:16,2:15:3.01:0,3,41	0/1:11,1:13:22.81:23,0,89	0/0:15,0:14:3.48:0,3,21	0/1:7,0:7:35.94:36,0,45	1/1:18,1:19:8.66:310,9,0	0/1:25,0:24:5.51:300,0,6	1/1:5,1:4:5.98:55,6,0	1/1:21,2:21:27.61:389,28,0	1/1:5,0:5:2.96:19,3,0	1/1:16,0:15:7.76:32,8,0	1/1:32,4:34:30.49:569,30,0	0/1:24,0:24:40.67:393,0,41	0/1:16,0:14:16.39:140,0,16	0/1:13,1:13:28.27:178,0,28
chr10	40564516	.	GA	G	741.36	PASS	AB=0.783;AC=12;AF=0.214;AN=56;BaseQRankSum=6.339;DP=475;FS=13.988;HRun=2;HaplotypeScore=142.1568;InbreedingCoeff=-0.3209;MQ=31.31;MQ0=20;MQRankSum=-1.798;QD=4.05;ReadPosRankSum=1.167;VQSLOD=-0.6811;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:9,9:19:70.97:81,0,71	0/0:4,0:4:12:0,12,144	0/0:63,0:15:45.14:0,45,611	0/0:59,0:7:21.07:0,21,316	0/1:22,0:23:52.16:52,0,353	0/1:20,3:24:44.46:44,0,218	0/0:11,0:8:14.22:0,14,128	0/0:19,0:16:36.39:0,36,458	0/0:9,2:11:5.53:0,6,89	0/0:12,0:9:21.05:0,21,270	0/0:14,0:15:7.69:0,8,270	0/0:9,0:9:8.97:0,9,89	0/0:13,0:12:30.22:0,30,414	0/1:10,0:9:17.34:17,0,213	0/0:19,0:16:5.60:0,6,46	0/0:12,0:12:16.78:0,17,169	0/1:15,0:16:21.23:21,0,75	0/0:4,0:4:8.62:0,9,100	0/1:7,4:11:45.78:46,0,212	0/1:2,12:14:64.99:65,0,148	0/1:4,0:3:13.54:14,0,24	0/1:8,11:18:54.92:55,0,164	0/0:2,0:2:2.96:0,3,19	0/0:13,0:13:9:0,9,117	0/0:24,0:23:2.78:0,3,646	0/1:15,9:23:99:204,0,172	0/1:2,7:8:25.03:134,0,25	0/1:3,5:8:60.39:154,0,60
chr10	40564519	.	AG	A	426.25	PASS	AB=0.673;AC=8;AF=0.143;AN=56;BaseQRankSum=7.365;DP=479;FS=6.325;HRun=1;HaplotypeScore=144.6922;InbreedingCoeff=-0.2084;MQ=31.90;MQ0=19;MQRankSum=-1.308;QD=3.58;ReadPosRankSum=3.958;VQSLOD=0.5362;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:10,8:19:56.88:57,0,93	0/0:4,0:4:12.03:0,12,169	0/0:63,0:15:45:0,45,591	0/0:57,0:7:21.07:0,21,325	0/0:22,0:22:35.81:0,36,497	0/0:22,3:25:2.29:0,2,301	0/0:11,0:8:14.20:0,14,143	0/0:19,0:16:38.82:0,39,547	0/1:10,2:11:22.24:22,0,130	0/0:14,0:11:27.94:0,28,395	0/0:15,0:15:21.03:0,21,310	0/0:9,0:9:9:0,9,83	0/0:13,0:12:31.27:0,31,512	0/0:9,0:8:18.06:0,18,282	0/0:20,0:18:4.55:0,5,43	0/0:12,0:12:18.16:0,18,217	0/0:16,0:16:10.57:0,11,105	0/0:4,0:4:9.03:0,9,135	0/1:8,4:11:39.01:39,0,291	0/1:2,10:14:26.47:26,0,194	0/0:5,0:3:3:0,3,43	0/1:9,10:19:6.83:7,0,202	0/0:2,0:2:3:0,3,25	0/0:13,0:13:9.02:0,9,92	0/0:26,0:24:51.07:0,51,802	0/1:16,7:24:99:165,0,195	0/1:2,5:8:34.90:102,0,35	0/1:3,5:8:81.63:138,0,82
chr10	40564524	.	GAGAAAGAAAGAAGAA	G	6356.47	PASS	AB=0.923;AC=27;AF=0.482;AN=56;BaseQRankSum=4.675;DP=470;FS=10.776;HRun=0;HaplotypeScore=188.1081;InbreedingCoeff=0.3840;MQ=33.71;MQ0=18;MQRankSum=-5.066;QD=24.83;ReadPosRankSum=1.093;VQSLOD=2.7972;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:12,9:21:24.07:521,24,0	0/0:5,0:5:12.04:0,12,491	0/0:49,0:12:12.01:0,12,155	0/0:47,0:7:6.02:0,6,99	0/1:24,0:23:25.90:26,0,312	1/1:13,0:25:29.07:201,29,0	0/1:11,0:10:10.77:130,0,11	1/1:17,0:13:24.55:437,25,0	1/1:7,0:12:26.31:263,26,0	0/0:17,0:15:19.63:0,20,750	0/1:15,0:15:19.33:19,0,449	0/1:8,0:9:32.63:33,0,36	0/1:12,0:11:69.64:70,0,1038	0/0:9,0:8:15.03:0,15,869	0/0:21,0:18:5.71:0,6,87	0/1:10,0:10:4.68:5,0,134	0/0:16,0:16:9.03:0,9,139	0/0:5,0:5:11.40:0,11,451	1/1:12,0:11:15.78:315,16,0	1/1:14,0:14:33.11:839,33,0	1/1:5,0:3:3.01:42,3,0	1/1:14,9:22:35.15:974,35,0	0/0:2,0:2:3.01:0,3,40	0/0:14,0:14:5.97:0,6,51	0/0:26,0:24:3.86:0,4,2058	0/1:14,8:24:99:1456,0,119	1/1:8,1:8:21.07:578,21,0	1/1:8,0:8:18.06:447,18,0
chr10	40564527	.	AAAGAAAG	A	6625.91	PASS	AB=1.000;AC=43;AF=0.768;AN=56;BaseQRankSum=4.029;DP=439;FS=4.843;HRun=0;HaplotypeScore=140.3952;InbreedingCoeff=0.2197;MQ=35.60;MQ0=16;MQRankSum=-5.729;QD=19.04;ReadPosRankSum=-0.881;VQSLOD=4.0453;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:20:24.08:365,24,0	0/1:6,0:6:2.48:2,0,158	0/0:38,0:8:12.02:0,12,134	0/0:42,0:6:6.02:0,6,96	1/1:18,5:21:36:776,36,0	1/1:24,0:23:30:493,30,0	1/1:13,0:11:18.05:277,18,0	1/1:14,0:13:24.46:277,24,0	1/1:11,0:11:27.09:463,27,0	0/1:17,0:15:27.49:27,0,294	0/1:16,0:16:49.28:49,0,185	1/1:2,8:10:6.02:127,6,0	0/1:12,0:11:71.36:71,0,464	0/0:10,0:9:17.69:0,18,355	1/1:4,17:18:6.02:148,6,0	1/1:2,7:9:11.96:238,12,0	1/1:1,12:13:9.03:221,9,0	0/1:6,0:6:29.98:30,0,151	1/1:11,0:11:15.71:177,16,0	1/1:14,0:14:33.01:486,33,0	1/1:6,0:4:6.02:80,6,0	1/1:22,0:21:35.60:528,36,0	1/1:3,0:3:3.01:73,3,0	1/1:2,12:14:3.01:74,3,0	0/1:22,0:21:32.72:33,0,848	0/1:26,0:25:23.98:981,0,24	1/1:8,0:7:21.04:304,21,0	1/1:7,0:7:18.06:326,18,0
chr10	40564531	.	AAAG	A	5101.20	PASS	AB=0.976;AC=45;AF=0.804;AN=56;BaseQRankSum=3.723;DP=422;FS=2.285;HRun=0;HaplotypeScore=126.7697;InbreedingCoeff=0.0897;MQ=37.93;MQ0=12;MQRankSum=-4.401;QD=14.29;ReadPosRankSum=-3.174;VQSLOD=4.2554;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:20:24.03:261,24,0	0/1:6,0:6:38.28:80,0,38	0/0:31,0:7:12.02:0,12,134	0/0:34,0:3:6.02:0,6,74	1/1:17,6:21:35.99:433,36,0	1/1:22,0:21:28.41:328,28,0	1/1:12,0:10:18:181,18,0	1/1:11,0:10:26.98:333,27,0	1/1:11,0:11:27.07:333,27,0	0/1:19,0:18:27.23:188,0,27	0/1:18,0:18:15.81:195,0,16	1/1:10,0:10:6:52,6,0	0/1:14,0:13:99:151,0,115	0/1:8,2:9:46.45:46,0,93	1/1:21,0:18:5.98:54,6,0	1/1:9,0:9:11.93:98,12,0	1/1:13,0:13:9.01:90,9,0	0/1:6,0:6:40.68:67,0,41	1/1:11,0:11:11.65:118,12,0	1/1:15,0:15:36.06:405,36,0	1/1:4,0:3:5.97:61,6,0	1/1:22,0:21:35.63:360,36,0	1/1:0,4:4:6.02:80,6,0	1/1:13,0:13:3:27,3,0	0/1:24,0:23:99:151,0,233	1/1:23,0:23:40.47:570,40,0	1/1:8,0:7:21.01:228,21,0	1/1:8,0:7:18.05:208,18,0
chr10	40564534	.	G	GA	6015.60	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-2.968;DP=398;FS=8.426;HRun=3;HaplotypeScore=111.7771;InbreedingCoeff=0.5833;MQ=40.23;MQ0=10;MQRankSum=2.690;QD=17.54;ReadPosRankSum=0.206;VQSLOD=3.8389;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:20:17.81:229,18,0	1/1:0,2:8:20.21:196,20,0	0/0:21,0:6:12.02:0,12,134	0/0:24,0:2:6.02:0,6,74	1/1:17,5:20:33.94:440,34,0	1/1:15,2:20:12.62:165,13,0	1/1:4,7:12:18.10:159,18,0	1/1:1,8:9:27.01:360,27,0	1/1:6,3:11:19.01:180,19,0	1/1:2,1:19:53.13:685,53,0	1/1:2,1:19:39.60:528,40,0	1/1:9,0:9:3.20:21,3,0	1/1:1,11:11:33.11:465,33,0	1/1:3,6:8:15.94:218,16,0	1/1:19,1:18:1.38:3,1,0	0/0:8,1:9:2.24:0,2,4	1/1:13,0:13:4.86:33,5,0	1/1:2,4:5:15.04:190,15,0	1/1:3,1:9:7.73:85,8,0	1/1:2,2:16:25.02:367,25,0	1/1:0,1:3:5.97:61,6,0	1/1:9,0:20:22.28:341,22,0	1/1:4,0:4:4.26:44,4,0	1/1:13,0:13:2.97:20,3,0	1/1:1,22:22:57.66:813,58,0	1/1:13,1:24:17.60:242,18,0	1/1:2,0:7:10.07:105,10,0	1/1:1,1:7:10.43:63,10,0
chr10	40564915	.	T	TA	1730.67	PASS	AB=0.978;AC=7;AF=0.125;AN=56;BaseQRankSum=-7.851;DP=691;FS=4.612;HRun=8;HaplotypeScore=93.2417;InbreedingCoeff=0.8297;MQ=83.25;MQ0=1;MQRankSum=1.680;QD=15.73;ReadPosRankSum=-0.825;VQSLOD=3.5810;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:84.04:0,84,769	0/0:5,0:5:9:0,9,82	0/1:43,1:43:7.35:7,0,349	0/0:31,0:27:12.95:0,13,191	0/0:31,0:31:78.04:0,78,713	1/1:1,16:17:48.14:554,48,0	1/1:5,22:27:60.18:693,60,0	0/0:36,0:36:72.49:0,72,660	1/1:0,21:21:54.16:623,54,0	0/0:30,0:30:75.03:0,75,686	0/0:23,0:23:60.03:0,60,549	0/0:26,0:26:72.02:0,72,654	0/0:3,0:19:30.55:0,31,90	0/0:5,0:25:36.66:0,37,108	0/0:27,0:27:66.03:0,66,604	0/0:16,1:16:13.41:0,13,377	0/0:45,0:45:99:0,129,1181	0/0:19,0:19:51.03:0,51,467	0/0:18,0:18:47.98:0,48,426	0/0:27,0:27:66.02:0,66,603	0/0:22,0:22:63.02:0,63,571	0/0:23,0:23:54.02:0,54,494	0/0:23,0:23:51:0,51,461	0/0:15,0:15:42.02:0,42,383	0/0:24,0:24:66.03:0,66,604	0/0:23,0:23:60.01:0,60,546	0/0:21,0:21:51.02:0,51,467	0/0:20,0:20:45.01:0,45,412
chr10	40565422	.	TG	T	7513.03	PASS	AB=0.950;AC=47;AF=0.839;AN=56;BaseQRankSum=1.478;DP=429;FS=12.188;HRun=9;HaplotypeScore=65.0518;InbreedingCoeff=0.8450;MQ=80.08;MQ0=0;MQRankSum=-5.106;QD=20.53;ReadPosRankSum=0.394;VQSLOD=4.7238;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,20:29:68.91:606,69,0	1/1:2,3:5:9:82,9,0	0/1:17,1:18:26.84:27,0,244	0/0:19,0:19:30.57:0,31,298	1/1:7,10:17:35.99:324,36,0	1/1:2,14:16:42.01:384,42,0	1/1:3,11:14:35.97:321,36,0	1/1:7,14:21:42.01:384,42,0	1/1:5,14:19:50.99:455,51,0	1/1:3,14:17:42.01:384,42,0	1/1:2,8:10:23.89:201,24,0	0/0:20,0:20:41.75:0,42,484	1/1:2,6:8:18:165,18,0	1/1:4,7:11:17.99:165,18,0	1/1:4,9:13:30:270,30,0	1/1:2,15:17:45.02:412,45,0	1/1:10,17:26:63.01:571,63,0	1/1:3,9:12:29.96:266,30,0	1/1:1,11:12:32.99:295,33,0	1/1:3,7:10:21.01:192,21,0	1/1:6,15:21:16.34:396,16,0	1/1:5,17:22:50.92:445,51,0	0/0:9,0:10:26.91:0,27,288	0/0:14,0:14:36.11:0,36,415	1/1:2,7:9:23.95:206,24,0	1/1:1,8:9:24.01:220,24,0	1/1:1,15:16:45.02:412,45,0	1/1:0,12:12:36.02:329,36,0
chr10	40565477	.	GGGT	G	1656.71	PASS	AB=0.964;AC=34;AF=0.607;AN=56;BaseQRankSum=-0.699;DP=337;FS=1.452;HRun=0;HaplotypeScore=95.9666;InbreedingCoeff=0.1236;MQ=82.42;MQ0=0;MQRankSum=-2.583;QD=6.52;ReadPosRankSum=1.478;VQSLOD=2.7485;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:15,0:15:11.96:12,0,92	1/1:7,0:7:6.96:23,7,0	0/1:16,0:16:12.92:13,0,345	0/0:18,0:17:33.63:0,34,518	1/1:7,0:7:17.22:87,17,0	0/0:20,0:20:43.93:0,44,190	0/0:16,0:16:34.82:0,35,139	0/1:20,0:20:96.20:96,0,103	0/0:22,0:22:17.11:0,17,172	1/1:11,0:11:24.74:98,25,0	0/1:7,0:7:10.41:24,0,10	1/1:2,16:18:33.11:551,33,0	1/1:7,0:7:0.31:37,0,0	1/1:11,0:11:19.70:73,20,0	1/1:15,0:15:12.29:80,12,0	1/1:10,0:10:3.30:45,3,0	0/1:16,0:15:17.05:58,0,17	1/1:17,0:17:14.68:103,15,0	0/1:11,0:11:41.16:55,0,41	0/1:5,0:5:8.96:9,0,43	0/1:16,0:16:8.87:9,0,72	0/1:9,0:9:7.28:7,0,60	1/1:2,6:8:18.06:298,18,0	0/1:2,7:9:0.94:106,0,1	1/1:5,0:5:11.37:36,11,0	0/1:9,0:9:10.66:11,0,35	0/0:7,0:7:17.32:0,17,74	0/1:5,0:5:7.33:7,0,29
chr10	40565478	.	GGT	G	5583.21	PASS	AB=1.000;AC=51;AF=0.911;AN=56;BaseQRankSum=-0.489;DP=333;FS=5.983;HRun=0;HaplotypeScore=77.9452;InbreedingCoeff=0.6604;MQ=82.87;MQ0=0;MQRankSum=-6.389;QD=18.55;ReadPosRankSum=4.175;VQSLOD=4.7037;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:16:18.27:92,18,0	1/1:0,6:6:9.03:131,9,0	0/0:15,0:15:9.73:0,10,249	0/0:17,0:17:22.32:0,22,385	1/1:2,5:7:21.05:268,21,0	1/1:19,1:20:26.68:107,27,0	1/1:16,0:16:20.21:51,20,0	1/1:19,0:19:35.55:194,36,0	1/1:22,0:22:36.23:122,36,0	1/1:3,8:11:33.10:460,33,0	1/1:5,3:8:24.04:303,24,0	1/1:16,0:17:32.72:233,33,0	1/1:3,3:6:18.03:217,18,0	1/1:3,8:11:27.05:362,27,0	1/1:3,11:14:39.04:534,39,0	1/1:3,7:10:27.08:390,27,0	1/1:4,10:13:38.97:513,39,0	1/1:5,13:18:51.08:676,51,0	1/1:11,0:11:13.18:132,13,0	0/1:6,0:6:9.02:48,0,9	1/1:16,0:16:27.18:131,27,0	1/1:8,0:8:10.47:45,10,0	1/1:7,0:8:17.82:124,18,0	1/1:8,0:9:9.83:62,10,0	1/1:2,4:6:18.04:241,18,0	1/1:9,0:9:11.04:47,11,0	1/1:7,0:7:8.25:38,8,0	1/1:6,0:6:12.18:59,12,0
chr10	40565479	.	GT	G	6826.49	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-0.788;DP=339;FS=6.693;HRun=2;HaplotypeScore=72.6487;InbreedingCoeff=0.8049;MQ=82.65;MQ0=0;MQRankSum=-5.973;QD=22.16;ReadPosRankSum=4.145;VQSLOD=4.5098;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,13:18:27.02:299,27,0	1/1:6,0:6:8.71:49,9,0	0/0:14,0:14:2.95:0,3,191	0/0:15,1:17:19.11:0,19,243	1/1:9,0:9:20.48:131,20,0	1/1:2,18:20:60.06:728,60,0	1/1:1,15:16:39.13:501,39,0	1/1:0,19:19:54.09:609,54,0	1/1:1,21:22:66.13:810,66,0	1/1:10,0:12:31.91:186,32,0	1/1:5,0:8:23.30:139,23,0	1/1:17,0:17:31.68:167,32,0	1/1:4,0:6:11.76:81,12,0	1/1:9,0:11:25.96:143,26,0	1/1:12,1:13:37.58:207,38,0	1/1:8,0:9:26.08:144,26,0	1/1:14,0:14:40.59:233,41,0	1/1:16,1:17:49.55:293,50,0	1/1:6,5:11:32.88:306,33,0	1/1:5,3:8:15.02:166,15,0	1/1:4,13:17:42.03:477,42,0	1/1:3,5:8:18.05:218,18,0	1/1:7,0:7:17.20:90,17,0	1/1:8,1:9:12.21:85,12,0	1/1:7,0:8:17.48:104,17,0	1/1:4,5:9:18.05:219,18,0	1/1:1,6:7:21.05:245,21,0	1/1:2,4:6:18:197,18,0
chr10	40565539	.	TAA	T	4307.70	PASS	AB=0.679;AC=28;AF=0.500;AN=56;BaseQRankSum=-6.025;DP=377;FS=0.901;HRun=12;HaplotypeScore=71.3729;InbreedingCoeff=0.8118;MQ=72.81;MQ0=1;MQRankSum=0.795;QD=20.13;ReadPosRankSum=0.278;VQSLOD=4.1903;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,18:25:53.61:548,54,0	0/0:2,0:3:2.50:0,2,9	0/0:10,0:7:13.84:0,14,123	0/0:13,0:10:11.51:0,12,108	0/0:3,0:22:41.47:0,41,144	0/1:6,7:13:13.83:219,0,14	1/1:1,5:6:15.03:153,15,0	1/1:1,20:23:56.54:607,57,0	1/1:3,13:16:39.07:396,39,0	0/0:2,0:21:42.30:0,42,148	0/0:4,0:11:17.47:0,17,61	0/0:15,0:17:31.59:0,32,377	1/1:1,0:13:30.19:130,30,0	1/1:3,0:14:21.93:95,22,0	0/0:0,0:3:7.49:0,7,26	0/1:8,1:13:6.20:6,0,51	0/0:1,1:16:7.43:0,7,92	0/0:4,0:18:30.20:0,30,111	1/1:2,16:19:41.83:473,42,0	1/1:0,10:10:30.06:304,30,0	1/1:5,8:13:24.01:244,24,0	1/1:2,8:10:27.05:273,27,0	0/0:12,0:12:30.09:0,30,428	0/0:7,0:7:18.05:0,18,249	0/0:1,0:10:19.69:0,20,68	1/1:4,7:12:14.72:199,15,0	1/1:1,12:13:33.04:325,33,0	1/1:1,12:13:33.06:336,33,0
chr10	40565693	.	A	AT	8937.97	PASS	AB=0.583;AC=49;AF=0.875;AN=56;BaseQRankSum=-5.592;DP=449;FS=13.898;HRun=10;HaplotypeScore=42.7428;InbreedingCoeff=0.4493;MQ=78.80;MQ0=1;MQRankSum=-1.862;QD=21.13;ReadPosRankSum=3.444;VQSLOD=4.4721;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,39:45:53.55:775,54,0	1/1:0,8:8:18.05:192,18,0	0/0:12,0:12:15.21:0,15,134	0/0:11,0:12:7.22:0,7,43	1/1:5,11:16:24.02:243,24,0	1/1:5,13:17:11.45:327,11,0	1/1:6,16:23:44.94:457,45,0	1/1:4,15:20:44.95:461,45,0	1/1:0,14:14:30.08:320,30,0	1/1:1,9:10:27.06:279,27,0	1/1:3,17:20:20.47:423,20,0	1/1:3,8:11:21.05:224,21,0	0/1:4,8:12:22.21:197,0,22	1/1:2,8:10:18.05:192,18,0	1/1:2,3:5:6.02:64,6,0	1/1:3,9:12:27.07:288,27,0	1/1:2,28:30:60.15:639,60,0	1/1:1,15:16:42.11:447,42,0	0/1:9,23:34:11.48:676,0,11	1/1:3,11:14:27.04:276,27,0	1/1:3,20:23:48.12:512,48,0	1/1:0,7:7:21.05:224,21,0	1/1:0,6:6:18.05:192,18,0	1/1:3,18:21:29.49:519,29,0	1/1:5,9:14:29.96:285,30,0	0/1:4,12:16:7.18:340,0,7	1/1:1,7:8:12.03:128,12,0	1/1:1,9:10:24.06:256,24,0
chr10	40566102	.	G	GGT	2812.23	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-1.068;DP=714;FS=0.000;HRun=0;HaplotypeScore=92.9901;InbreedingCoeff=0.9793;MQ=85.67;MQ0=0;MQRankSum=-1.518;QD=37.00;ReadPosRankSum=2.549;VQSLOD=5.6371;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:58:99:0,144,1813	0/0:3,0:3:9.03:0,9,114	0/0:29,0:30:69.03:0,69,830	0/0:30,0:30:66.15:0,66,742	0/0:17,0:17:42.13:0,42,534	0/0:18,0:18:51.11:0,51,618	0/0:26,0:26:60.16:0,60,724	0/0:19,0:19:45.12:0,45,538	0/0:21,0:21:54.15:0,54,660	0/0:17,0:17:45.11:0,45,555	0/0:21,0:21:57.18:0,57,723	1/1:4,23:28:69.13:1150,69,0	0/0:21,0:21:60.18:0,60,749	0/0:23,0:23:60.15:0,60,733	0/0:40,0:41:99:0,111,1357	0/0:25,0:25:57.14:0,57,696	0/0:43,0:43:99:0,102,1265	0/0:30,0:30:78.22:0,78,965	0/0:16,0:16:38.93:0,39,453	0/0:20,0:20:45.12:0,45,543	0/0:56,0:56:99:0,147,1816	0/0:12,0:12:30.09:0,30,377	1/1:3,13:16:36.11:601,36,0	1/1:3,29:32:72.25:1204,72,0	0/0:16,0:16:45.14:0,45,573	0/0:22,0:22:54.17:0,54,675	0/0:36,0:37:99:0,105,1311	0/0:16,0:16:39.12:0,39,496
chr10	40566875	.	TTC	T	70.83	PASS	AB=1.000;AC=8;AF=0.143;AN=56;BaseQRankSum=0.562;DP=441;FS=12.475;HRun=0;HaplotypeScore=68.8993;InbreedingCoeff=0.1768;MQ=63.14;MQ0=19;MQRankSum=-1.532;QD=0.72;ReadPosRankSum=-0.547;VQSLOD=0.1419;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:35.58:0,36,302	0/0:9,0:9:23.66:0,24,189	0/0:16,0:6:17.96:0,18,150	0/1:19,0:8:0.78:1,0,31	0/0:24,0:23:49.68:0,50,342	0/1:15,0:15:24.83:36,0,25	0/1:10,0:10:7.15:41,0,7	0/0:31,0:30:25.49:0,25,614	1/1:12,1:13:17.23:86,17,0	0/0:16,0:16:38.64:0,39,307	0/0:13,0:12:32.02:0,32,235	0/0:12,0:12:5.64:0,6,107	0/0:7,0:7:10.73:0,11,65	0/1:13,0:11:13.73:14,0,18	0/0:14,0:13:35.20:0,35,266	0/0:17,0:16:11.99:0,12,203	0/0:30,0:28:57.39:0,57,474	0/0:20,0:17:38.64:0,39,313	0/1:20,0:16:18.61:19,0,286	0/0:17,0:17:21.57:0,22,282	0/0:9,0:9:12.02:0,12,128	0/1:9,0:9:2.92:3,0,113	0/0:8,0:8:11.89:0,12,66	0/0:13,0:12:16.61:0,17,79	0/0:14,0:14:17.88:0,18,169	0/0:13,4:17:20.21:0,20,330	0/0:15,0:15:11.94:0,12,107	0/0:14,0:13:27.01:0,27,249
chr10	40566891	.	C	CT	1527.08	PASS	AB=0.972;AC=18;AF=0.346;AN=52;BaseQRankSum=-3.004;DP=449;FS=19.598;HRun=13;HaplotypeScore=63.9035;InbreedingCoeff=0.6631;MQ=49.69;MQ0=38;MQRankSum=0.434;QD=8.53;ReadPosRankSum=0.021;VQSLOD=0.7650;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:24:0.94:0,1,84	1/1:6,4:10:3.31:153,3,0	./.	./.	1/1:17,8:23:30.91:224,31,0	0/0:16,0:17:30.79:0,31,229	0/0:12,0:11:17.95:0,18,145	0/0:34,0:31:2.81:0,3,198	0/0:14,0:14:20.92:0,21,166	1/1:14,1:14:26.42:209,26,0	1/1:10,5:14:6.49:64,6,0	0/0:13,0:13:14.80:0,15,110	0/0:8,0:7:8.98:0,9,72	0/0:13,0:12:13.97:0,14,97	1/1:7,2:8:14.66:99,15,0	1/1:12,1:12:17.82:156,18,0	1/1:34,3:34:21.59:430,22,0	1/1:21,3:17:16.47:239,16,0	0/0:19,0:12:8.56:0,9,94	0/0:12,0:12:11.10:0,11,101	0/0:9,0:8:5.97:0,6,45	0/0:10,0:9:7.95:0,8,43	0/0:10,0:10:11.93:0,12,95	0/0:14,0:13:16.52:0,17,123	0/1:16,1:15:3.70:125,0,4	0/0:16,0:15:3.95:0,4,140	0/1:14,0:14:10.73:11,0,18	0/0:22,0:20:17.74:0,18,144
chr10	40567132	.	C	CA	16380.71	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=0.339;DP=482;FS=0.000;HRun=0;HaplotypeScore=94.2588;InbreedingCoeff=0.8620;MQ=47.41;MQ0=12;MQRankSum=0.925;QD=36.40;ReadPosRankSum=3.104;VQSLOD=4.5180;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,47:48:93.32:1485,93,0	1/1:0,3:3:9.03:143,9,0	0/0:8,0:4:6.02:0,6,79	0/0:24,0:4:10.58:0,11,119	1/1:0,12:12:21.07:336,21,0	1/1:0,19:19:48.16:766,48,0	1/1:2,22:24:57.15:872,57,0	1/1:4,27:30:75.20:1119,75,0	1/1:2,15:17:33.11:526,33,0	1/1:1,18:18:51.17:812,51,0	1/1:0,12:12:27.09:431,27,0	1/1:1,11:12:30.10:470,30,0	1/1:2,12:14:39.09:593,39,0	1/1:1,14:14:33.11:526,33,0	1/1:1,17:18:42.14:671,42,0	1/1:2,17:19:39.13:609,39,0	1/1:1,12:12:15:416,15,0	1/1:1,19:20:51.17:795,51,0	1/1:5,10:11:30.10:479,30,0	1/1:0,8:8:21.07:335,21,0	1/1:1,26:27:57.01:910,57,0	1/1:0,10:10:27.09:420,27,0	1/1:0,7:7:15.05:239,15,0	1/1:0,27:27:51.17:804,51,0	1/1:0,7:7:18.06:287,18,0	1/1:2,28:30:81.28:1290,81,0	1/1:1,16:16:48.16:758,48,0	1/1:0,6:6:18.06:288,18,0
chr10	40568809	.	ATG	A	6411.74	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=16.144;DP=1168;FS=3.084;HRun=0;HaplotypeScore=162.2608;InbreedingCoeff=0.9995;MQ=64.61;MQ0=2;MQRankSum=-3.256;QD=29.82;ReadPosRankSum=3.306;VQSLOD=6.2420;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,132,2219	0/0:21,0:21:60.19:0,60,1023	0/0:34,0:33:84.22:0,84,1383	0/0:50,0:47:99:0,120,1800	0/0:32,0:32:87.24:0,87,1460	0/0:27,0:27:69.22:0,69,1173	0/0:34,0:34:90.31:0,90,1576	0/0:44,0:44:99:0,117,1946	0/0:64,0:64:99:0,175,2895	0/0:55,0:55:99:0,163,2832	0/0:28,0:28:78.25:0,78,1329	1/1:6,50:56:99:1740,129,0	1/1:6,41:46:99:1433,108,0	1/1:3,41:44:99:1376,102,0	0/0:82,0:82:99:0,232,3940	0/0:34,0:34:99:0,99,1696	0/0:35,0:35:93.30:0,93,1591	0/0:18,0:18:54.14:0,54,873	0/0:25,0:25:69.22:0,69,1165	0/0:40,0:40:99:0,108,1843	0/0:98,0:98:99:0,268,4479	0/0:37,0:37:99:0,111,1911	1/1:4,22:26:50.21:687,50,0	1/1:4,38:42:87.24:1176,87,0	0/0:33,0:33:78.25:0,78,1326	0/0:53,0:53:99:0,144,2499	0/0:50,0:49:99:0,147,2428	0/0:8,0:8:24.08:0,24,405
chr10	40568997	.	ATCAGTTAC	A	13775.95	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=17.946;DP=884;FS=0.000;HRun=0;HaplotypeScore=228.1777;InbreedingCoeff=0.9760;MQ=71.14;MQ0=0;MQRankSum=-19.504;QD=59.90;ReadPosRankSum=2.750;VQSLOD=4.5049;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:61,0:61:99:0,181,7408	0/0:10,0:10:30.10:0,30,1341	0/0:32,0:32:77.67:0,78,2462	0/0:33,0:34:93.06:0,93,3177	0/0:32,0:32:93.32:0,93,4052	1/1:2,20:21:45.15:1259,45,0	1/1:4,18:22:33.11:946,33,0	0/0:45,0:45:99:0,132,5431	1/1:5,33:38:81.28:2323,81,0	0/0:34,0:34:99:0,102,4256	0/0:27,0:27:81.26:0,81,3373	1/1:3,38:42:93.32:2662,93,0	1/1:2,27:29:75.26:2150,75,0	1/1:5,32:37:87.30:2494,87,0	0/0:56,0:56:99:0,163,6850	0/0:29,1:30:4.29:0,4,3730	0/0:25,0:25:75.26:0,75,3281	0/0:18,0:18:51.18:0,51,2232	0/0:21,0:21:60.19:0,60,2480	0/0:25,0:25:72.11:0,72,2984	0/0:56,0:56:99:0,162,6365	0/0:23,0:23:69.23:0,69,2963	1/1:2,21:23:45.15:1285,45,0	1/1:3,14:17:24.08:657,24,0	0/0:26,0:26:78.27:0,78,3382	0/0:37,0:36:99:0,111,4776	0/0:39,0:38:99:0,111,4741	0/0:23,0:23:69.24:0,69,3085
chr10	40570850	.	T	TC	555.97	PASS	AB=1.000;AC=29;AF=0.558;AN=52;BaseQRankSum=2.997;DP=250;FS=0.904;HRun=1;HaplotypeScore=69.4962;InbreedingCoeff=0.6277;MQ=68.98;MQ0=16;MQRankSum=-5.881;QD=4.24;ReadPosRankSum=0.715;VQSLOD=0.2655;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,0:6:8.92:63,9,0	1/1:6,0:6:4.32:37,4,0	0/0:27,0:12:28.16:0,28,270	0/0:40,0:14:29.75:0,30,274	1/1:10,0:10:3:25,3,0	0/0:9,0:8:23.60:0,24,208	0/0:5,0:5:15.04:0,15,178	1/1:6,0:6:9.75:87,10,0	0/0:3,0:3:9.03:0,9,112	1/1:12,0:11:10.42:54,10,0	./.	0/0:5,0:5:5.87:0,6,77	0/0:1,0:1:3.01:0,3,39	0/0:3,0:3:9.03:0,9,117	./.	1/1:6,0:6:1.82:5,2,0	1/1:11,2:9:8.89:53,9,0	1/1:12,0:11:11.49:67,11,0	1/1:6,0:5:5.20:38,5,0	1/1:6,0:6:8.55:65,9,0	1/1:2,1:2:0.89:2,1,0	0/0:4,0:4:0.05:0,0,1	0/0:4,0:4:5.63:0,6,62	0/0:3,0:3:9.03:0,9,115	1/1:14,0:14:9.61:37,10,0	1/1:6,0:6:10.77:85,11,0	0/1:20,0:20:13.85:32,0,14	1/1:5,0:5:9:83,9,0
chr10	40570851	.	CT	C	1035.37	PASS	AC=32;AF=0.615;AN=52;BaseQRankSum=2.439;DP=249;FS=4.129;HRun=1;HaplotypeScore=67.5134;InbreedingCoeff=0.7250;MQ=69.01;MQ0=16;MQRankSum=-6.090;QD=7.73;ReadPosRankSum=-0.549;VQSLOD=0.6291;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,1:6:12.40:90,12,0	1/1:5,1:6:5.98:53,6,0	0/0:26,0:12:28.90:0,29,308	0/0:39,0:14:29.68:0,30,377	1/1:7,3:10:3:25,3,0	0/0:9,0:8:23.59:0,24,218	0/0:5,0:5:14.83:0,15,139	1/1:5,1:6:13.22:108,13,0	0/0:3,0:3:9.03:0,9,122	1/1:12,0:11:18.21:131,18,0	./.	0/0:5,0:5:9.02:0,9,121	0/0:1,0:1:3.01:0,3,48	0/0:3,0:3:9.03:0,9,140	./.	1/1:5,0:5:2.98:21,3,0	1/1:9,4:9:14.90:119,15,0	1/1:9,3:11:22.57:153,23,0	1/1:4,2:5:8.30:58,8,0	1/1:6,0:6:7.93:62,8,0	1/1:3,0:2:0.89:2,1,0	1/1:4,0:4:3.91:22,4,0	0/0:4,0:4:9:0,9,97	0/0:3,0:3:9.03:0,9,135	1/1:12,2:14:12.91:71,13,0	1/1:6,0:6:14.87:115,15,0	1/1:19,1:20:0.67:109,1,0	1/1:5,0:5:9:82,9,0
chr10	40570855	.	CTCTCTCTCTCTCTCTCTCT	C	3781.20	PASS	AB=0.826;AC=32;AF=0.640;AN=50;BaseQRankSum=4.390;DP=219;FS=13.130;HRun=0;HaplotypeScore=88.0534;InbreedingCoeff=0.4578;MQ=67.03;MQ0=18;MQRankSum=-5.090;QD=32.60;ReadPosRankSum=0.967;VQSLOD=1.0758;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:4,1:5:6.43:44,6,0	1/1:1,4:5:6.02:321,6,0	0/0:25,0:10:3.52:0,4,257	0/0:38,0:12:24.91:0,25,356	./.	0/1:7,0:8:79.54:80,0,113	0/1:4,0:5:49.25:49,0,66	1/1:2,0:2:4.25:35,4,0	0/0:3,0:3:5.36:0,5,23	1/1:1,9:10:21.54:896,22,0	./.	0/0:5,0:5:9.02:0,9,333	0/0:1,0:1:3.01:0,3,36	0/0:3,0:3:9.03:0,9,498	./.	1/1:0,5:5:3.01:162,3,0	1/1:7,6:9:12.04:522,12,0	1/1:6,3:8:11.65:521,12,0	1/1:3,0:3:1.22:95,1,0	1/1:0,0:4:2.55:18,3,0	1/1:2,0:1:0.89:2,1,0	1/1:3,0:3:0.03:0,0,0	0/0:3,0:3:6.02:0,6,276	0/0:2,0:2:5.97:0,6,173	1/1:6,8:13:12.58:354,13,0	1/1:0,0:6:15.01:335,15,0	1/1:3,0:16:10.32:314,10,0	1/1:2,0:2:3.01:34,3,0
chr10	40570871	.	CTCTCTCTCTCTCTCTCTCTATATA	C	3031.49	PASS	AB=1.000;AC=22;AF=0.579;AN=38;BaseQRankSum=5.093;DP=171;FS=0.000;HRun=0;HaplotypeScore=94.1284;InbreedingCoeff=0.4801;MQ=38.03;MQ0=18;MQRankSum=-4.162;QD=31.91;ReadPosRankSum=4.561;VQSLOD=1.5888;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:3,0:3:0.75:2,1,0	1/1:4,1:5:6.02:285,6,0	0/0:11,0:4:6:0,6,54	0/0:21,0:2:6.02:0,6,89	./.	0/0:11,0:10:15.01:0,15,211	0/1:5,0:5:40.53:74,0,41	1/1:4,0:2:2.83:16,3,0	./.	1/1:12,0:11:21.87:723,22,0	./.	0/0:4,0:4:6.02:0,6,270	./.	0/0:3,0:3:9.03:0,9,373	./.	1/1:5,0:5:3.01:125,3,0	1/1:11,3:9:9.03:488,9,0	1/1:10,0:9:17.78:441,18,0	0/1:4,0:3:2.31:84,0,2	./.	./.	./.	0/0:2,0:2:3.01:0,3,223	0/0:1,0:1:3.01:0,3,136	1/1:11,1:11:9.03:359,9,0	1/1:6,0:6:6.02:218,6,0	1/1:15,0:15:6.76:355,7,0	./.
chr10	40570889	.	CTATATA	C	552.51	PASS	AC=16;AF=0.727;AN=22;BaseQRankSum=1.971;DP=138;FS=5.315;HRun=0;HaplotypeScore=90.9356;InbreedingCoeff=0.3909;MQ=29.87;MQ0=12;MQRankSum=-1.873;QD=7.08;ReadPosRankSum=1.380;VQSLOD=1.5837;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:4:2.92:0,3,17	1/1:3,0:3:3.01:35,3,0	./.	./.	./.	0/0:6,0:6:6.91:0,7,115	0/0:2,0:2:3.01:0,3,57	./.	./.	1/1:11,1:11:3.01:56,3,0	./.	./.	./.	./.	./.	./.	1/1:13,2:12:12.04:212,12,0	1/1:11,2:11:2.97:55,3,0	1/1:6,0:8:6.02:105,6,0	./.	./.	./.	./.	./.	1/1:8,3:10:6.02:88,6,0	1/1:4,1:5:3.01:56,3,0	1/1:11,0:11:3.01:42,3,0	./.
chr10	40572973	.	TC	T	5045.21	PASS	AB=1.000;AC=25;AF=0.446;AN=56;BaseQRankSum=8.091;DP=610;FS=16.456;HRun=10;HaplotypeScore=78.1493;InbreedingCoeff=0.9212;MQ=80.30;MQ0=0;MQRankSum=-2.188;QD=16.54;ReadPosRankSum=2.362;VQSLOD=3.9460;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:10,34:44:56.78:722,57,0	0/0:8,0:8:15.02:0,15,155	0/0:35,0:28:52.06:0,52,484	0/1:40,0:34:25.05:25,0,311	0/0:18,0:18:48.06:0,48,499	0/0:25,0:25:65.79:0,66,674	0/0:26,0:26:52.80:0,53,615	1/1:11,11:23:25.91:251,26,0	0/0:24,0:24:63.17:0,63,696	0/0:21,1:21:16.15:0,16,397	0/0:13,0:13:24.06:0,24,265	1/1:4,14:18:50.97:436,51,0	0/0:5,0:16:17.19:0,17,94	0/0:6,0:18:31.32:0,31,173	0/0:19,1:20:22.07:0,22,472	0/0:12,0:12:33.07:0,33,356	0/0:27,0:27:78.21:0,78,863	0/0:24,0:24:54.11:0,54,579	1/1:5,18:24:56.94:490,57,0	1/1:5,8:13:26.99:234,27,0	1/1:2,23:25:59.98:520,60,0	1/1:3,13:16:38.90:330,39,0	1/1:6,17:23:59.97:516,60,0	1/1:7,18:25:47.97:417,48,0	0/0:16,0:16:45.06:0,45,462	1/1:3,19:22:23.16:402,23,0	1/1:1,20:21:50.64:442,51,0	1/1:0,11:11:29.99:260,30,0
chr10	40573028	.	A	AT	2004.44	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-4.498;DP=591;FS=2.703;HRun=0;HaplotypeScore=69.4067;InbreedingCoeff=0.9941;MQ=80.26;MQ0=0;MQRankSum=-2.005;QD=36.44;ReadPosRankSum=2.546;VQSLOD=3.6179;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,132,1813	0/0:6,0:6:15.05:0,15,210	0/0:23,0:23:63.20:0,63,860	0/0:26,0:26:74.56:0,75,913	0/0:20,0:20:60.20:0,60,834	0/0:16,0:15:48.16:0,48,669	0/0:22,0:22:66.22:0,66,921	0/0:42,0:42:99:0,117,1573	0/0:23,0:23:69.23:0,69,961	0/0:15,0:15:45.15:0,45,627	0/0:14,0:14:39.13:0,39,541	1/1:1,16:17:51.17:805,51,0	0/0:16,0:16:45.15:0,45,627	0/0:21,0:21:57.19:0,57,795	0/0:25,0:25:72.24:0,72,1002	0/0:12,0:12:36.12:0,36,502	0/0:28,0:28:84.25:0,84,1134	0/0:20,0:19:60.20:0,60,837	0/0:17,0:17:51.16:0,51,696	0/0:18,0:18:51.16:0,51,691	0/0:39,0:39:99:0,117,1634	0/0:16,0:16:45.14:0,45,613	1/1:0,18:18:39.13:623,39,0	1/1:0,20:20:45.15:719,45,0	0/0:14,0:14:42.14:0,42,584	0/0:19,0:19:57.19:0,57,797	0/0:28,0:28:75.21:0,75,1029	0/0:10,0:10:30.10:0,30,420
chr10	40573185	.	C	CA	3887.74	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-2.148;DP=582;FS=1.957;HRun=1;HaplotypeScore=88.9310;InbreedingCoeff=0.9192;MQ=77.46;MQ0=0;MQRankSum=1.298;QD=38.12;ReadPosRankSum=2.611;VQSLOD=4.2817;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:93.24:0,93,1156	0/0:4,0:4:12.04:0,12,156	0/0:25,0:25:54.21:0,54,803	0/0:24,0:24:69.20:0,69,860	1/1:2,13:15:27.08:399,27,0	0/0:19,0:19:54.16:0,54,685	0/0:37,0:37:99:0,102,1303	0/0:22,0:22:57.15:0,57,721	0/0:22,0:22:63.20:0,63,812	0/0:13,0:13:27.07:0,27,326	0/0:8,0:8:11.95:0,12,142	0/0:29,0:29:87.27:0,87,1110	0/0:12,0:12:36.10:0,36,451	0/0:22,0:22:66.21:0,66,854	1/1:0,33:33:90.30:1348,90,0	1/1:1,16:17:12.21:679,12,0	1/1:1,36:37:99:1461,99,0	0/0:18,0:18:42.14:0,42,545	0/0:20,0:20:54.14:0,54,669	0/0:11,0:11:30.10:0,30,390	0/0:31,0:31:78.17:0,78,996	0/0:4,0:4:3.01:0,3,39	0/0:22,0:22:47.82:0,48,592	0/0:40,0:40:99:0,111,1440	0/0:12,0:12:21.07:0,21,273	0/0:20,0:20:39.12:0,39,494	0/0:21,0:20:57.18:0,57,734	0/0:4,0:4:12.04:0,12,156
chr10	40573410	.	T	TA	11565.64	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=-9.100;DP=495;FS=2.806;HRun=7;HaplotypeScore=42.8423;InbreedingCoeff=0.9398;MQ=58.67;MQ0=2;MQRankSum=-2.046;QD=28.49;ReadPosRankSum=1.200;VQSLOD=5.3397;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,38:41:99:1305,108,0	1/1:1,9:10:21.06:254,21,0	0/0:8,0:4:7.42:0,7,84	0/0:9,0:6:6.03:0,6,122	1/1:4,20:24:60.10:689,60,0	1/1:2,20:22:54.17:652,54,0	1/1:1,15:16:39.12:471,39,0	1/1:6,24:30:72.20:846,72,0	1/1:0,17:17:45.14:544,45,0	1/1:1,18:19:54.14:629,54,0	1/1:2,14:16:29.92:340,30,0	0/0:18,0:18:48.07:0,48,463	0/0:12,0:12:33.01:0,33,305	0/0:15,0:15:45.07:0,45,435	1/1:1,15:16:36.11:435,36,0	1/1:3,14:17:24.07:290,24,0	1/1:2,31:32:84.22:998,84,0	1/1:1,19:21:44.60:640,45,0	1/1:5,12:16:33.10:399,33,0	1/1:2,18:20:51.15:611,51,0	1/1:0,7:7:15.05:181,15,0	1/1:3,2:5:6.02:72,6,0	0/0:18,0:18:48.06:0,48,458	0/0:9,0:9:27.04:0,27,261	1/1:4,20:24:48.15:580,48,0	1/1:0,23:23:66.20:797,66,0	1/1:3,20:23:54.17:652,54,0	1/1:0,5:5:15.05:181,15,0
chr10	40573628	.	A	AC	15051.44	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=10.082;DP=571;FS=2.523;HRun=3;HaplotypeScore=127.2210;InbreedingCoeff=0.9747;MQ=83.47;MQ0=0;MQRankSum=-13.023;QD=36.44;ReadPosRankSum=-1.588;VQSLOD=3.6869;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,21:32:72.11:973,72,0	1/1:0,4:4:12.04:167,12,0	0/0:33,0:33:51.90:0,52,847	0/0:18,0:18:54.11:0,54,611	1/1:4,12:16:44.96:576,45,0	1/1:3,16:19:57.16:745,57,0	1/1:2,20:22:66.19:876,66,0	1/1:10,26:35:96.27:1252,96,0	1/1:1,20:21:60.20:837,60,0	1/1:4,16:21:60.19:818,60,0	1/1:3,7:10:27.09:370,27,0	0/0:23,0:23:63.18:0,63,741	0/0:19,0:19:54.17:0,54,647	0/0:23,0:23:66.19:0,66,773	1/1:4,23:27:78.26:1083,78,0	1/1:4,14:17:51.14:657,51,0	1/1:4,16:20:51.12:684,51,0	1/1:6,10:16:42.09:559,42,0	1/1:6,22:28:75.19:994,75,0	1/1:7,14:21:54.17:728,54,0	1/1:4,7:11:24.05:300,24,0	1/1:2,7:9:24.06:316,24,0	0/0:18,0:18:51.16:0,51,612	0/0:24,0:24:72.18:0,72,847	1/1:1,11:12:36.11:484,36,0	1/1:4,23:27:75.24:1031,75,0	1/1:5,32:37:99:1516,111,0	1/1:4,2:6:6.02:84,6,0
chr10	40573649	.	G	GA	14516.77	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=9.755;DP=548;FS=2.624;HRun=2;HaplotypeScore=124.1458;InbreedingCoeff=0.9869;MQ=82.10;MQ0=0;MQRankSum=-12.441;QD=36.57;ReadPosRankSum=0.199;VQSLOD=4.3059;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,22:23:60.04:771,60,0	1/1:1,4:5:12.04:173,12,0	0/0:21,0:21:60.18:0,60,732	0/0:24,0:24:59.99:0,60,692	1/1:1,9:10:24.08:345,24,0	1/1:0,21:21:60.17:841,60,0	1/1:3,20:23:63.20:888,63,0	1/1:5,34:38:99:1408,99,0	1/1:1,17:18:54.13:737,54,0	1/1:4,20:24:60.20:860,60,0	1/1:2,7:9:18.06:259,18,0	0/0:24,0:24:72.21:0,72,879	0/0:19,0:19:51.16:0,51,632	0/0:21,0:21:54.17:0,54,670	1/1:1,23:24:63.18:883,63,0	1/1:1,22:22:63.18:884,63,0	1/1:3,17:20:42.13:585,42,0	1/1:1,15:16:42.14:599,42,0	1/1:0,18:18:54.18:777,54,0	1/1:2,13:15:35.99:448,36,0	1/1:2,10:12:32.97:453,33,0	1/1:1,10:11:30.10:431,30,0	0/0:19,0:19:51.15:0,51,620	0/0:23,0:23:69.22:0,69,853	1/1:0,15:15:42.14:604,42,0	1/1:4,23:27:69.20:955,69,0	1/1:5,35:40:99:1444,102,0	1/1:0,4:4:12.04:173,12,0
chr10	40574473	.	T	TC	1746.64	PASS	AB=0.982;AC=40;AF=0.714;AN=56;BaseQRankSum=-3.888;DP=346;FS=6.312;HRun=11;HaplotypeScore=71.6872;InbreedingCoeff=-0.1945;MQ=85.13;MQ0=0;MQRankSum=0.257;QD=5.11;ReadPosRankSum=-0.253;VQSLOD=1.3726;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:25:67.55:101,0,68	0/1:5,0:5:6.07:6,0,37	0/1:23,0:23:38.91:39,0,87	0/1:26,0:22:12.05:20,0,12	1/1:8,0:8:11.80:85,12,0	1/1:11,0:11:14.35:120,14,0	1/1:14,0:14:17.48:112,17,0	1/1:23,1:24:2.74:12,3,0	1/1:11,0:11:14.78:115,15,0	0/1:10,1:11:28.86:61,0,29	1/1:4,0:4:5.48:37,5,0	1/1:16,0:16:20.53:136,21,0	1/1:0,0:3:3.41:19,3,0	1/1:11,0:11:5.31:36,5,0	0/1:12,0:12:14.43:22,0,14	0/1:13,1:14:2.09:102,0,2	1/1:21,0:21:16.42:205,16,0	1/1:20,1:21:6.97:169,7,0	0/1:13,1:14:22.65:100,0,23	0/0:3,0:3:2.99:0,3,23	0/1:14,0:14:60.43:90,0,60	0/1:9,0:9:19.03:53,0,19	0/0:1,0:1:0:0,0,0	1/1:8,0:8:8.83:58,9,0	1/1:7,0:7:5.88:45,6,0	0/1:8,0:8:31.49:58,0,31	0/1:12,0:13:30.94:31,0,36	1/1:8,0:8:8.87:64,9,0
chr10	40574484	.	C	CCA	3841.84	PASS	AB=0.803;AC=42;AF=0.750;AN=56;BaseQRankSum=-0.901;DP=444;FS=10.524;HRun=0;HaplotypeScore=89.4169;InbreedingCoeff=0.1417;MQ=77.34;MQ0=0;MQRankSum=0.364;QD=9.78;ReadPosRankSum=-2.300;VQSLOD=1.5815;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:35:19.93:536,0,20	1/1:6,0:7:5.49:105,5,0	0/0:22,0:22:41.39:0,41,392	0/0:16,0:17:18.39:0,18,171	1/1:1,0:15:23.48:145,23,0	1/1:1,1:18:14.94:119,15,0	1/1:1,14:21:17.75:210,18,0	1/1:5,0:17:24.18:222,24,0	0/1:4,2:17:4.34:140,0,4	0/1:9,0:13:45.41:110,0,45	1/1:1,0:11:12.21:78,12,0	0/1:19,0:19:35.02:85,0,35	0/1:12,0:12:12.09:12,0,14	1/1:9,0:9:5.79:37,6,0	1/1:1,0:17:2.39:30,2,0	1/1:4,0:16:13.18:85,13,0	1/1:13,0:24:47.82:371,48,0	1/1:6,0:22:13.83:129,14,0	1/1:3,1:19:15.27:375,15,0	1/1:6,0:6:9.10:96,9,0	1/1:14,1:22:35.58:407,36,0	1/1:11,0:14:5.19:237,5,0	0/0:10,0:10:4.25:0,4,30	0/1:7,0:7:13.89:46,0,14	1/1:1,0:13:8.26:44,8,0	0/1:6,0:9:28.95:93,0,29	0/1:5,0:23:14.85:60,0,15	1/1:0,0:7:11.64:69,12,0
chr10	40575101	.	TC	T	2537.80	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=0.889;DP=641;FS=1.016;HRun=1;HaplotypeScore=78.3437;InbreedingCoeff=0.9999;MQ=76.33;MQ0=0;MQRankSum=0.710;QD=38.45;ReadPosRankSum=2.722;VQSLOD=4.3411;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:90.22:0,90,1331	0/0:14,0:14:42.10:0,42,620	0/0:16,0:16:41.40:0,41,656	0/0:12,0:12:36.02:0,36,471	0/0:30,0:30:87.24:0,87,1317	1/1:0,16:16:48.16:670,48,0	1/1:0,28:28:78.26:1089,78,0	0/0:33,0:33:99:0,99,1505	1/1:0,22:22:66.22:922,66,0	0/0:20,0:20:60.20:0,60,933	0/0:18,0:18:54.12:0,54,803	0/0:21,0:21:60.19:0,60,929	0/0:22,0:22:66.21:0,66,1027	0/0:24,0:24:72.19:0,72,1090	0/0:27,0:27:81.23:0,81,1255	0/0:19,0:19:57.14:0,57,859	0/0:26,0:26:78.19:0,78,1186	0/0:24,0:24:66.12:0,66,987	0/0:24,0:24:68.89:0,69,966	0/0:20,0:20:60.18:0,60,921	0/0:29,0:29:84.27:0,84,1308	0/0:27,0:27:81.23:0,81,1261	0/0:27,0:27:81.26:0,81,1246	0/0:27,0:27:78.22:0,78,1208	0/0:26,0:26:78.22:0,78,1187	0/0:23,0:23:69.14:0,69,963	0/0:14,0:14:42.11:0,42,615	0/0:22,0:22:66.18:0,66,966
chr10	40575259	.	TC	T	2248.71	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=4.155;DP=704;FS=4.760;HRun=1;HaplotypeScore=82.6813;InbreedingCoeff=0.9980;MQ=61.77;MQ0=3;MQRankSum=1.018;QD=33.56;ReadPosRankSum=0.025;VQSLOD=3.3067;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:93.30:0,93,1462	0/0:10,0:10:30.08:0,30,433	0/0:24,0:18:41.72:0,42,694	0/0:39,0:32:78.88:0,79,1091	0/0:20,0:20:60.20:0,60,958	0/0:18,0:18:54.17:0,54,829	0/0:35,0:35:99:0,105,1623	0/0:33,0:33:99:0,99,1517	0/0:33,0:33:96.31:0,96,1508	0/0:17,0:17:48.15:0,48,732	0/0:14,0:14:42.14:0,42,660	1/1:0,28:28:78.26:1091,78,0	0/0:24,0:24:72.24:0,72,1118	0/0:27,0:27:81.28:0,81,1292	0/0:34,0:34:96.30:0,96,1485	0/0:21,0:21:63.21:0,63,985	0/0:39,0:39:99:0,117,1846	0/0:31,0:31:93.27:0,93,1454	0/0:18,0:17:42.14:0,42,668	0/0:26,0:26:78.19:0,78,1190	0/0:54,0:54:99:0,160,2541	0/0:23,0:23:66.21:0,66,1032	1/1:0,12:12:27.09:377,27,0	1/1:0,27:27:66.22:923,66,0	0/0:16,0:16:48.16:0,48,764	0/0:21,0:21:63.21:0,63,986	0/0:21,0:21:63.21:0,63,995	0/0:7,0:7:21.07:0,21,336
chr10	40576333	.	CTCCCTT	C	1610.04	PASS	AB=1.000;AC=48;AF=0.857;AN=56;BaseQRankSum=-1.778;DP=141;FS=19.784;HRun=0;HaplotypeScore=22.8071;InbreedingCoeff=0.1202;MQ=52.38;MQ0=20;MQRankSum=0.127;QD=12.38;ReadPosRankSum=-1.490;VQSLOD=-0.0021;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,0:7:12.81:94,13,0	1/1:4,0:4:8.95:69,9,0	0/0:6,0:3:5.13:0,5,58	0/0:5,0:3:5.92:0,6,59	1/1:1,5:6:5.88:36,6,0	0/1:6,0:6:17:17,0,84	0/1:6,0:6:14.02:74,0,14	1/1:5,0:5:3:28,3,0	1/1:3,0:2:5.99:49,6,0	1/1:2,7:8:17.96:146,18,0	1/1:3,0:2:5.99:50,6,0	1/1:2,0:2:5.99:49,6,0	1/1:3,0:3:4.19:21,4,0	1/1:3,0:3:8.99:75,9,0	1/1:3,0:2:5.99:50,6,0	1/1:5,0:4:11.98:98,12,0	1/1:5,0:5:14.97:121,15,0	1/1:5,0:4:11.93:93,12,0	1/1:8,0:3:9.01:83,9,0	1/1:2,0:2:3:25,3,0	1/1:12,0:8:20.87:161,21,0	0/1:7,0:7:73.99:104,0,74	1/1:2,0:2:3:25,3,0	1/1:13,0:9:14.95:122,15,0	1/1:3,0:3:9:77,9,0	1/1:2,0:2:4.78:25,5,0	1/1:2,0:2:5.92:39,6,0	0/1:4,0:3:15.98:16,0,62
chr10	40576874	.	CCTTT	C	392.28	PASS	AB=1.000;AC=16;AF=0.364;AN=44;BaseQRankSum=-2.274;DP=544;FS=0.000;HRun=0;HaplotypeScore=137.8418;InbreedingCoeff=0.2055;MQ=47.58;MQ0=50;MQRankSum=0.511;QD=1.85;ReadPosRankSum=0.270;VQSLOD=2.5235;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:14,0:13:9.29:16,0,9	0/0:13,0:12:13.99:0,14,87	./.	./.	0/0:27,0:27:4.70:0,5,29	0/1:21,0:20:9.64:10,0,88	0/0:24,0:22:8.89:0,9,59	./.	./.	0/0:18,0:12:3:0,3,28	0/0:32,0:25:29.89:0,30,270	1/1:15,0:13:9.03:127,9,0	0/1:20,0:20:32.84:33,0,102	0/1:15,0:15:6.43:6,0,180	1/1:19,0:17:0.33:2,0,0	0/1:20,0:19:10.63:11,0,38	1/1:19,0:15:0.07:16,0,0	0/0:18,0:14:14.90:0,15,112	0/0:6,0:5:4.26:0,4,13	./.	./.	0/0:14,0:14:6.53:0,7,23	1/1:19,11:29:3.83:102,4,0	1/1:25,0:23:17.72:201,18,0	0/0:19,0:16:15.02:0,15,185	0/0:29,0:26:4.04:0,4,35	0/1:14,0:14:0.57:1,0,4	0/0:15,0:15:4.31:0,4,14
chr10	40576899	.	CTTTCTTTCTTTCTTTCTTTCTTTCTT	C	6148.74	PASS	AB=0.880;AC=17;AF=0.327;AN=52;BaseQRankSum=3.817;DP=479;FS=1.535;HRun=0;HaplotypeScore=285.1228;InbreedingCoeff=0.5062;MQ=44.24;MQ0=39;MQRankSum=-5.847;QD=31.53;ReadPosRankSum=-2.909;VQSLOD=3.0348;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:15:9.65:969,10,0	0/0:16,0:14:39.13:0,39,1531	./.	./.	0/0:22,0:20:44.16:0,44,1058	0/0:15,0:14:37.37:0,37,1764	0/0:15,0:13:36.11:0,36,970	1/1:7,23:24:66.20:906,66,0	0/0:27,0:23:33.07:0,33,1044	0/0:13,0:7:0.15:0,0,551	0/0:28,0:18:37.07:0,37,1612	0/0:17,0:15:42.12:0,42,1056	0/0:15,0:15:45.14:0,45,1672	0/0:15,0:15:39.13:0,39,1812	0/0:16,0:15:45.15:0,45,1041	0/0:15,0:14:40.34:0,40,1076	0/0:13,0:9:19:0,19,408	0/1:22,0:14:14.47:14,0,872	1/1:1,8:7:15.05:468,15,0	1/1:1,27:27:9.03:143,9,0	0/1:6,0:6:16.13:164,0,16	1/1:8,0:11:25.90:963,26,0	0/0:28,0:27:69.20:0,69,2195	0/0:27,0:25:59.94:0,60,2218	0/1:22,0:16:49.74:50,0,1136	0/1:4,22:24:99:1397,0,188	1/1:9,0:10:24.01:740,24,0	0/1:10,0:12:99:335,0,570
chr10	40576923	.	CTT	C	3090.93	PASS	AB=0.915;AC=25;AF=0.481;AN=52;BaseQRankSum=5.421;DP=467;FS=10.617;HRun=3;HaplotypeScore=105.8458;InbreedingCoeff=0.1755;MQ=44.29;MQ0=39;MQRankSum=-3.640;QD=9.12;ReadPosRankSum=0.512;VQSLOD=-0.4294;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:9,12:17:10.75:435,0,11	0/1:15,0:12:53.94:122,0,54	./.	./.	0/1:18,1:17:25.75:26,0,180	0/0:17,0:17:43.28:0,43,493	0/0:17,0:16:45:0,45,480	1/1:29,0:24:39.13:561,39,0	0/0:19,0:19:21.06:0,21,251	1/1:13,0:6:13.51:115,14,0	0/1:28,0:19:99:124,0,154	0/0:16,0:14:15.64:0,16,300	0/1:13,0:13:32:32,0,181	0/0:14,0:14:8.79:0,9,186	0/0:16,0:16:19.84:0,20,237	0/0:13,0:13:27.52:0,28,242	0/0:13,0:10:14.98:0,15,148	0/1:26,0:18:52.53:53,0,160	1/1:10,0:9:10.22:181,10,0	1/1:27,3:27:9.03:123,9,0	1/1:5,6:6:1.31:120,1,0	0/1:4,5:8:1.51:156,0,2	0/1:26,1:27:4.69:5,0,466	0/1:20,0:19:59.76:60,0,259	0/1:23,0:17:45.63:273,0,46	1/1:25,0:24:15.53:498,16,0	1/1:1,12:13:17.86:337,18,0	0/1:6,1:6:0.93:48,0,1
chr10	40576925	.	T	TC	248.02	PASS	AB=0.932;AC=14;AF=0.269;AN=52;BaseQRankSum=7.306;DP=476;FS=22.743;HRun=0;HaplotypeScore=120.5959;InbreedingCoeff=0.0699;MQ=44.33;MQ0=39;MQRankSum=-4.148;QD=0.98;ReadPosRankSum=-0.813;VQSLOD=0.4400;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:20,0:17:33.18:33,0,71	0/1:10,4:11:32.89:33,0,43	./.	./.	0/1:19,0:17:2.95:3,0,154	0/0:19,0:19:52.17:0,52,567	0/0:16,0:15:42.08:0,42,522	0/1:30,0:25:54.52:55,0,82	0/0:19,0:19:24.08:0,24,298	1/1:10,4:7:7.73:65,8,0	0/1:27,2:20:22.81:23,0,161	0/0:16,0:14:38.83:0,39,447	0/0:13,0:13:14.68:0,15,169	0/0:14,0:14:30.42:0,30,158	0/0:17,0:17:19.32:0,19,195	0/0:14,0:14:37.15:0,37,212	0/0:14,0:11:15.41:0,15,132	0/1:22,3:17:1.64:2,0,219	0/0:10,0:9:8.86:0,9,76	1/1:30,0:27:5.70:45,6,0	0/0:7,0:6:0.28:0,0,3	0/1:9,0:8:0.40:0,0,2	0/0:28,0:28:56.19:0,56,665	0/0:21,0:20:41.01:0,41,434	0/1:17,6:17:26.85:118,0,27	0/1:24,1:24:8.12:8,0,84	0/1:13,0:13:1.74:2,0,32	0/0:7,0:6:5.21:0,5,73
chr10	40577059	.	ATCTCTCTCTC	A	1843.29	PASS	AB=0.745;AC=30;AF=0.625;AN=48;BaseQRankSum=3.806;DP=452;FS=0.000;HRun=0;HaplotypeScore=110.7207;InbreedingCoeff=0.3971;MQ=51.29;MQ0=14;MQRankSum=-4.070;QD=8.27;ReadPosRankSum=0.370;VQSLOD=1.9791;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:9.03:0,9,349	1/1:2,0:5:6.02:139,6,0	./.	./.	1/1:9,7:16:11.93:163,12,0	1/1:5,1:8:3.57:220,4,0	1/1:11,0:16:6.02:121,6,0	./.	1/1:6,0:8:3.01:70,3,0	0/1:9,0:13:23.40:63,0,23	1/1:7,0:10:8.82:163,9,0	1/1:7,1:8:2.60:88,3,0	1/1:4,0:6:3.01:70,3,0	1/1:3,0:8:3.01:70,3,0	1/1:12,0:18:15.03:167,15,0	0/1:8,0:13:7.62:8,0,79	1/1:11,8:19:6.02:177,6,0	1/1:9,7:17:9.03:247,9,0	0/0:9,0:9:6.02:0,6,185	0/0:18,0:18:6.02:0,6,144	0/0:12,0:12:6.02:0,6,129	./.	0/1:9,5:14:23.47:165,0,23	0/1:20,8:27:0:0,0,0	1/1:11,0:14:3.01:70,3,0	0/0:17,0:16:15.03:0,15,270	0/0:12,0:11:9.02:0,9,112	0/0:18,0:17:9.50:0,10,244
chr10	40577351	.	A	AC	197.37	PASS	AB=0.848;AC=5;AF=0.089;AN=56;BaseQRankSum=6.385;DP=654;FS=34.404;HRun=0;HaplotypeScore=72.9524;InbreedingCoeff=-0.0976;MQ=85.88;MQ0=0;MQRankSum=-5.377;QD=1.92;ReadPosRankSum=0.586;VQSLOD=0.6305;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,129,1752	0/1:9,1:10:17.54:18,0,344	0/0:25,0:25:75.25:0,75,1049	0/0:26,0:26:66.28:0,66,855	0/0:22,0:22:66.22:0,66,922	0/0:22,0:22:66.22:0,66,921	0/0:18,0:18:54.18:0,54,755	0/0:35,0:34:99:0,99,1340	0/0:22,0:22:66.20:0,66,890	0/1:14,2:16:47.34:47,0,522	0/0:29,1:30:87.29:0,87,1207	0/0:17,0:17:51.15:0,51,695	0/0:22,0:22:66.21:0,66,908	0/0:15,0:15:45.13:0,45,610	0/0:24,0:24:72.24:0,72,1007	0/0:23,0:23:69.22:0,69,949	0/0:18,0:18:54.18:0,54,755	0/0:21,0:21:31.15:0,31,802	0/0:24,0:24:69.23:0,69,963	0/1:25,7:32:99:168,0,872	0/0:23,0:23:69.23:0,69,963	0/1:12,6:18:56.05:56,0,423	0/1:23,4:27:25.83:26,0,810	0/0:18,0:18:51.17:0,51,713	0/0:21,0:21:63.21:0,63,881	0/0:19,1:20:57.19:0,57,798	0/0:38,0:38:99:0,114,1578	0/0:24,0:24:72.24:0,72,1007
chr10	40578251	.	GGCT	G	911.72	PASS	AB=0.806;AC=4;AF=0.071;AN=56;BaseQRankSum=9.140;DP=767;FS=3.185;HRun=0;HaplotypeScore=109.8250;InbreedingCoeff=-0.0780;MQ=87.65;MQ0=0;MQRankSum=5.406;QD=10.02;ReadPosRankSum=-4.380;VQSLOD=2.4271;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:69,0:69:99:0,199,4322	0/1:11,1:12:15.82:16,0,636	0/1:13,12:25:99:546,0,445	0/1:21,9:30:99:402,0,636	0/0:20,0:20:57.20:0,57,1258	0/0:20,0:20:60.21:0,60,1332	0/0:42,0:42:99:0,117,2564	0/0:31,1:32:41.34:0,41,1849	0/0:30,0:30:87.28:0,87,1876	0/0:33,0:33:90.31:0,90,1977	0/0:14,0:14:39.13:0,39,853	0/0:29,0:29:87.28:0,87,1878	0/0:26,0:26:75.26:0,75,1653	0/0:30,0:30:81.28:0,81,1801	0/0:24,0:24:66.23:0,66,1469	0/0:24,0:24:72.23:0,72,1566	0/0:42,0:42:99:0,123,2697	0/0:28,0:28:78.27:0,78,1732	0/1:20,4:24:56.67:57,0,1187	0/0:25,1:26:29.33:0,29,1625	0/0:35,3:37:53.37:0,53,2052	0/0:26,0:26:69.22:0,69,1499	0/0:26,0:26:69.13:0,69,1420	0/0:37,0:37:99:0,102,2231	0/0:12,1:13:36.12:0,36,800	0/0:23,2:25:17.28:0,17,1337	0/0:18,0:17:54.19:0,54,1197	0/0:4,0:4:12.04:0,12,268
chr10	40579994	.	GT	G	1165.21	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=5.356;DP=360;FS=0.714;HRun=1;HaplotypeScore=54.5501;InbreedingCoeff=0.8516;MQ=56.07;MQ0=0;MQRankSum=-1.464;QD=29.13;ReadPosRankSum=-0.014;VQSLOD=3.2426;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:63.21:0,63,881	0/0:7,0:7:21.07:0,21,289	0/0:12,1:8:20.86:0,21,258	0/0:14,0:11:29.53:0,30,360	0/0:20,0:20:45.15:0,45,629	0/0:15,0:15:42.13:0,42,594	0/0:23,1:23:4.96:0,5,771	0/0:8,0:8:20.67:0,21,169	0/0:11,0:11:30.10:0,30,436	0/0:19,0:19:54.18:0,54,768	0/0:16,0:16:36.73:0,37,494	1/1:0,11:11:27.09:374,27,0	0/0:8,0:9:21.90:0,22,344	0/0:14,0:14:39.12:0,39,547	0/0:17,0:17:39.12:0,39,555	0/0:13,0:12:32.97:0,33,441	0/0:9,0:9:27.08:0,27,365	0/0:12,0:12:2.38:0,2,399	0/0:8,0:8:21.05:0,21,276	0/0:13,0:13:33.01:0,33,444	0/0:8,0:8:18.06:0,18,252	0/0:18,0:18:54.17:0,54,765	1/1:2,11:13:34:458,34,0	1/1:3,13:16:39:475,39,0	0/0:9,0:9:24.08:0,24,348	0/0:14,0:14:42.14:0,42,583	0/0:3,0:3:9.02:0,9,104	0/0:3,0:3:9.03:0,9,131
chr10	40580113	.	G	GA	1119.44	PASS	AB=0.928;AC=30;AF=0.556;AN=54;BaseQRankSum=4.570;DP=272;FS=54.686;HRun=0;HaplotypeScore=155.8616;InbreedingCoeff=-0.1345;MQ=38.90;MQ0=2;MQRankSum=-2.927;QD=4.76;ReadPosRankSum=1.013;VQSLOD=1.3844;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,2:16:4.41:0,4,68	0/0:7,0:7:0:0,0,0	0/0:7,0:2:3.01:0,3,33	0/0:4,0:0:2.37:0,2,8	1/1:10,0:8:6.85:56,7,0	0/1:15,2:16:99:141,0,240	0/1:14,0:10:5.82:6,0,64	0/1:11,2:8:16.49:16,0,26	0/1:20,0:17:99:100,0,202	1/1:10,3:11:16.83:161,17,0	0/1:2,0:2:0:0,0,0	0/1:6,1:6:51.52:52,0,85	0/1:14,1:15:64.33:64,0,225	0/1:8,1:8:31.45:31,0,109	0/1:5,1:5:0.65:36,0,1	1/1:9,2:9:18.29:165,18,0	0/1:7,1:8:45.85:50,0,46	1/1:13,0:12:6.01:61,6,0	1/1:6,1:6:9.72:89,10,0	1/1:4,0:4:0.05:1,0,0	0/1:8,0:8:4.12:43,0,4	1/1:8,0:8:1.66:27,2,0	0/1:22,0:21:2.87:3,0,243	0/1:11,1:12:23.45:23,0,46	1/1:4,1:5:6.91:88,7,0	0/1:9,2:9:41.84:48,0,42	0/0:2,0:2:2.97:0,3,20	./.
chr10	40580133	.	GTA	G	951.37	PASS	AB=0.874;AC=24;AF=0.429;AN=56;BaseQRankSum=-1.501;DP=430;FS=9.944;HRun=0;HaplotypeScore=198.4674;InbreedingCoeff=-0.5864;MQ=35.24;MQ0=12;MQRankSum=0.816;QD=2.40;ReadPosRankSum=-0.283;VQSLOD=1.3327;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:24,1:24:51.21:51,0,116	0/0:2,0:3:2.84:0,3,14	0/1:19,0:2:0.92:1,0,41	0/1:13,0:2:6.10:11,0,6	0/1:10,5:14:45.87:83,0,46	0/1:21,1:21:77.28:77,0,88	0/1:20,1:17:39.85:40,0,50	0/1:14,1:11:36.08:36,0,37	0/1:20,4:22:29.94:30,0,75	0/1:20,0:20:53.63:54,0,167	0/0:2,1:3:2.60:0,3,10	0/1:15,3:17:99:119,0,122	0/1:17,3:20:78.75:105,0,79	0/1:8,2:8:2.35:2,0,46	0/1:6,3:8:22.96:47,0,23	0/1:13,4:14:18.44:93,0,18	0/1:8,1:9:32.68:33,0,77	0/0:12,1:13:7.34:0,7,98	0/1:11,2:12:36.97:37,0,48	0/1:8,1:9:2.99:3,0,61	0/1:12,0:11:4.99:5,0,5	0/1:14,2:18:26.18:26,0,97	0/1:27,4:29:84.02:84,0,130	0/1:21,0:22:43.52:48,0,44	0/0:8,2:10:17.81:0,18,87	0/1:13,0:15:79.57:80,0,97	0/0:3,0:3:5.82:0,6,34	1/1:1,1:3:0.80:32,1,0
chr10	40580153	.	GGAGGAA	G	811.39	PASS	AB=0.984;AC=19;AF=0.339;AN=56;BaseQRankSum=1.933;DP=553;FS=0.986;HRun=0;HaplotypeScore=259.7602;InbreedingCoeff=-0.4454;MQ=33.17;MQ0=13;MQRankSum=-2.084;QD=2.19;ReadPosRankSum=-3.631;VQSLOD=1.4533;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:36,0:34:98.74:147,0,99	0/0:4,0:2:3:0,3,25	1/1:32,0:3:1.72:4,2,0	0/0:26,0:5:5.15:0,5,88	0/1:24,0:20:31.40:31,0,68	0/1:20,3:22:99:145,0,292	0/0:27,0:22:12.01:0,12,265	0/0:19,0:18:16.76:0,17,188	0/1:26,2:26:27.97:28,0,372	0/1:32,0:29:56.17:56,0,314	0/1:9,0:9:9.56:21,0,10	0/1:22,1:22:99:119,0,210	0/0:26,0:25:16.19:0,16,428	0/0:12,0:9:17.91:0,18,173	0/1:13,0:13:34.03:34,0,48	0/1:17,0:14:33.57:34,0,52	0/1:11,0:11:25.07:25,0,110	0/1:11,0:11:56.36:56,0,128	0/1:15,0:13:24.40:24,0,128	0/0:13,0:11:0.21:0,0,80	0/1:12,0:11:8.46:8,0,17	0/1:22,0:19:17.01:17,0,141	0/1:38,2:32:99:145,0,215	0/0:27,0:26:37.99:0,38,341	0/1:14,0:14:43.32:43,0,109	0/0:25,0:22:38.08:0,38,264	0/1:8,0:8:25.17:25,0,69	0/0:4,0:4:5.96:0,6,45
chr10	40580166	.	G	GA	2970.59	PASS	AB=0.882;AC=27;AF=0.482;AN=56;BaseQRankSum=9.272;DP=548;FS=91.439;HRun=0;HaplotypeScore=228.8622;InbreedingCoeff=-0.6861;MQ=34.96;MQ0=11;MQRankSum=-2.651;QD=6.33;ReadPosRankSum=-1.819;VQSLOD=0.0410;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:27,6:33:99:236,0,185	1/1:6,1:5:6.86:59,7,0	0/0:31,0:3:0.27:0,0,1	0/0:37,0:8:18.05:0,18,232	0/1:20,3:19:41.80:239,0,42	0/1:17,4:20:99:189,0,313	0/1:20,5:23:99:214,0,404	0/1:10,1:10:22.42:22,0,115	0/1:25,3:26:99:138,0,541	0/1:31,2:31:99:323,0,354	0/1:11,1:11:42.26:88,0,42	0/1:21,3:23:70.08:70,0,371	0/1:17,4:20:75.39:75,0,529	0/0:11,0:10:20.95:0,21,293	0/1:12,2:14:94.60:95,0,106	0/1:13,4:16:97.59:211,0,98	0/1:6,3:9:38.44:181,0,38	0/1:7,1:8:67.63:93,0,68	0/1:12,1:11:92.44:122,0,92	0/1:14,1:13:7.57:8,0,91	0/1:10,1:10:17.98:18,0,68	0/1:22,4:23:99:247,0,157	0/1:35,6:33:99:169,0,459	0/1:24,2:25:44.96:45,0,611	0/1:11,5:16:95.75:198,0,96	0/1:19,1:17:41.62:42,0,371	0/1:9,0:9:17.94:18,0,103	1/1:5,0:5:5.18:26,5,0
chr10	40580176	.	GGAA	G	539.04	PASS	AB=0.958;AC=16;AF=0.286;AN=56;BaseQRankSum=8.492;DP=615;FS=53.236;HRun=0;HaplotypeScore=244.4561;InbreedingCoeff=-0.2774;MQ=38.28;MQ0=15;MQRankSum=-5.035;QD=1.56;ReadPosRankSum=-1.992;VQSLOD=0.8454;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:37,3:39:99:148,0,348	0/0:8,0:7:12.84:0,13,170	1/1:35,0:3:3.37:9,3,0	0/0:48,0:12:8.58:0,9,264	0/1:24,0:20:12.97:13,0,237	0/1:23,0:22:75.17:75,0,506	0/1:28,0:26:85.55:86,0,838	0/0:14,0:13:23.87:0,24,285	0/0:29,0:27:31.70:0,32,790	0/0:32,2:32:39.73:0,40,709	0/0:12,0:11:24.94:0,25,212	0/1:23,1:23:29.50:29,0,833	0/0:24,0:23:42.95:0,43,1022	0/0:15,0:14:24.04:0,24,819	0/0:19,1:20:35.33:0,35,380	0/1:17,1:17:53.02:53,0,256	0/1:10,0:10:35.74:36,0,86	0/0:10,0:9:15.54:0,16,136	0/1:14,2:12:30.72:31,0,176	0/0:17,0:15:35.34:0,35,357	0/1:15,0:13:18.64:19,0,28	0/1:24,2:23:21.80:22,0,495	0/1:41,1:35:92.96:93,0,754	0/1:28,0:28:30.40:30,0,1153	0/0:17,1:18:26.90:0,27,322	0/0:20,0:17:18.89:0,19,308	0/1:8,1:9:29.34:29,0,169	0/1:6,1:7:24.52:25,0,94
chr10	40580179	.	A	AGAGGAG	10875.78	PASS	AB=0.954;AC=40;AF=0.714;AN=56;BaseQRankSum=3.200;DP=617;FS=14.972;HRun=0;HaplotypeScore=242.2328;InbreedingCoeff=0.3783;MQ=41.45;MQ0=15;MQRankSum=-5.662;QD=22.38;ReadPosRankSum=-2.500;VQSLOD=2.7801;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:33,7:39:73.30:1114,73,0	1/1:5,2:7:17.77:309,18,0	0/0:37,0:5:2.50:0,3,15	0/1:53,0:17:12.34:12,0,243	1/1:19,4:20:32.30:491,32,0	0/1:19,0:20:25.71:26,0,429	0/1:24,0:25:47.01:47,0,617	1/1:14,1:14:17.96:207,18,0	0/0:26,0:25:14.71:0,15,579	1/1:26,6:33:86.03:1535,86,0	1/1:6,5:11:27.07:694,27,0	0/1:26,0:26:39.48:39,0,696	0/0:22,0:23:36.76:0,37,776	0/0:16,0:15:39.72:0,40,635	1/1:16,3:19:42.09:678,42,0	1/1:12,4:15:37.96:696,38,0	0/1:10,1:11:8.96:287,0,9	1/1:9,1:10:20.77:343,21,0	1/1:14,2:12:22.13:371,22,0	1/1:10,6:15:34.89:742,35,0	1/1:13,1:12:12.83:106,13,0	1/1:16,10:23:59.04:1255,59,0	0/1:41,0:36:97.94:98,0,615	0/0:29,0:29:0.57:0,1,974	1/1:15,3:18:39.07:822,39,0	1/1:16,2:16:17.28:426,17,0	1/1:3,6:9:10.41:410,10,0	1/1:7,0:7:16.11:167,16,0
chr10	40580181	.	A	AGGG	1354.85	PASS	AB=0.992;AC=24;AF=0.429;AN=56;BaseQRankSum=9.030;DP=624;FS=3.648;HRun=2;HaplotypeScore=243.3371;InbreedingCoeff=-0.5461;MQ=41.61;MQ0=15;MQRankSum=-5.992;QD=2.64;ReadPosRankSum=4.196;VQSLOD=-0.5272;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:40,0:39:99:103,0,234	0/1:7,0:7:40.11:40,0,114	0/1:37,0:6:13.79:14,0,23	0/1:55,0:17:0.59:1,0,265	0/1:25,0:20:99:134,0,127	0/1:20,2:21:90.39:90,0,452	0/1:26,1:25:61.27:61,0,669	0/1:15,0:14:9.31:9,0,293	0/0:24,1:24:18.18:0,18,550	0/1:34,0:33:99:149,0,268	0/1:12,0:11:49.24:99,0,49	0/1:26,1:26:4.67:5,0,725	0/0:23,0:23:59.88:0,60,848	0/0:17,0:16:22.19:0,22,630	0/1:20,0:20:65.99:66,0,208	0/1:16,0:15:99:114,0,118	0/1:10,0:11:14.15:14,0,87	0/1:12,0:11:46.34:46,0,58	0/1:15,0:11:16.51:17,0,143	0/1:17,0:16:83.35:83,0,211	0/0:14,0:12:14.87:0,15,139	0/1:26,0:23:99:165,0,177	0/1:40,1:36:73.54:74,0,592	0/0:29,1:31:20.89:0,21,1004	0/1:19,0:19:99:100,0,113	0/1:18,0:16:6.53:7,0,238	1/1:9,0:9:12.82:113,13,0	0/1:7,0:7:9.70:10,0,113
chr10	40581058	.	C	CAA	10847.08	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=19.322;DP=542;FS=0.000;HRun=2;HaplotypeScore=182.2991;InbreedingCoeff=0.9724;MQ=92.51;MQ0=1;MQRankSum=-19.349;QD=41.09;ReadPosRankSum=3.424;VQSLOD=4.7613;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,25:26:75.25:1081,75,0	1/1:0,4:4:12.04:177,12,0	0/0:31,0:31:89.08:0,89,1286	0/0:28,0:28:81.22:0,81,1210	1/1:1,15:16:45.15:617,45,0	0/0:23,0:23:66.21:0,66,1053	0/0:35,0:35:99:0,102,1661	1/1:0,8:8:24.08:369,24,0	0/0:26,0:26:78.23:0,78,1196	1/1:2,20:22:63.20:931,63,0	1/1:1,10:11:33.10:444,33,0	0/0:36,0:36:99:0,108,1732	0/0:23,0:23:69.19:0,69,1073	0/0:28,0:28:84.27:0,84,1345	1/1:2,20:22:63.18:893,63,0	1/1:1,17:18:5.25:700,5,0	1/1:2,10:12:33.11:477,33,0	1/1:3,9:12:33.11:485,33,0	1/1:0,9:9:27.09:417,27,0	1/1:1,11:12:36.12:525,36,0	1/1:3,5:7:15.05:234,15,0	1/1:2,18:19:54.18:765,54,0	0/0:20,0:20:60.19:0,60,952	0/0:28,0:28:84.29:0,84,1367	1/1:0,10:10:30.10:441,30,0	1/1:1,21:22:66.22:1007,66,0	1/1:1,23:27:75.17:1048,75,0	1/1:1,4:5:15.05:235,15,0
chr10	40581059	.	T	TTATTAG	22297.42	PASS	AB=0.528;AC=35;AF=0.625;AN=56;BaseQRankSum=18.585;DP=537;FS=0.319;HRun=0;HaplotypeScore=174.9028;InbreedingCoeff=0.9134;MQ=92.23;MQ0=1;MQRankSum=-19.240;QD=85.10;ReadPosRankSum=3.996;VQSLOD=5.9768;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,25:26:75.26:2322,75,0	1/1:0,4:4:12.04:372,12,0	0/0:30,0:30:87.26:0,87,2063	0/0:29,0:29:81.25:0,81,1850	1/1:0,14:16:45.15:1371,45,0	0/0:22,0:22:66.23:0,66,1635	0/0:35,0:35:99:0,105,2531	1/1:0,8:8:24.08:758,24,0	0/0:25,0:25:72.23:0,72,1759	1/1:0,20:20:60.21:1874,60,0	1/1:0,10:10:30.10:905,30,0	0/0:35,0:35:99:0,105,2654	0/0:23,0:23:69.24:0,69,1708	0/0:29,0:29:84.29:0,84,2123	1/1:1,20:21:63.20:1876,63,0	0/1:2,17:19:22.72:1528,0,23	1/1:2,10:12:30.10:929,30,0	1/1:2,9:11:27.08:847,27,0	1/1:1,9:10:27.09:854,27,0	1/1:1,11:12:34.36:1008,34,0	1/1:1,5:8:15.05:406,15,0	1/1:0,18:19:54.19:1661,54,0	0/0:19,0:19:57.18:0,57,1382	0/0:28,0:28:84.27:0,84,2100	1/1:0,10:10:30.10:930,30,0	1/1:1,21:22:63.19:1973,63,0	1/1:4,23:27:78.25:2309,78,0	1/1:1,4:5:13.29:374,13,0
chr10	40581181	.	C	CT	18348.29	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-12.583;DP=710;FS=2.022;HRun=1;HaplotypeScore=66.9361;InbreedingCoeff=0.9975;MQ=87.24;MQ0=0;MQRankSum=-7.224;QD=39.89;ReadPosRankSum=1.194;VQSLOD=5.5348;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,49:49:99:2097,144,0	1/1:0,9:9:27.09:405,27,0	0/0:30,0:30:87.14:0,87,1057	0/0:23,0:23:60.17:0,60,746	1/1:0,16:16:45.11:649,45,0	0/0:23,0:23:69.22:0,69,895	0/0:33,0:33:96.31:0,96,1246	1/1:1,40:41:99:1739,120,0	0/0:23,0:23:69.21:0,69,881	1/1:1,23:24:72.23:1052,72,0	1/1:2,17:19:48.16:719,48,0	0/0:22,0:22:63.20:0,63,818	0/0:21,0:21:60.16:0,60,761	0/0:33,0:33:99:0,99,1268	1/1:1,30:31:87.28:1274,87,0	1/1:2,25:27:69.23:1034,69,0	1/1:2,23:25:60.20:899,60,0	1/1:1,14:15:36.12:540,36,0	1/1:1,19:20:60.19:868,60,0	1/1:2,37:39:99:1574,105,0	1/1:1,28:29:66.22:989,66,0	1/1:3,25:28:75.21:1099,75,0	0/0:22,0:22:66.21:0,66,856	0/0:20,0:20:60.20:0,60,779	1/1:0,24:24:66.22:989,66,0	1/1:3,26:29:75.25:1119,75,0	1/1:1,29:30:72.24:1079,72,0	1/1:0,5:5:15.05:225,15,0
chr10	40581523	.	GAGA	G	11885.11	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=13.671;DP=516;FS=3.125;HRun=0;HaplotypeScore=98.7268;InbreedingCoeff=0.9945;MQ=53.20;MQ0=10;MQRankSum=-7.066;QD=40.29;ReadPosRankSum=-1.240;VQSLOD=5.4071;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,16:20:53.92:843,54,0	1/1:5,3:8:24:298,24,0	0/0:30,1:11:27.08:0,27,523	0/0:45,0:21:41.18:0,41,724	1/1:4,12:16:45.11:671,45,0	0/0:16,0:16:48.11:0,48,874	0/0:28,0:28:84.21:0,84,1569	1/1:16,15:31:77.93:1021,78,0	0/0:27,0:27:74.70:0,75,1482	1/1:8,7:15:42.12:609,42,0	1/1:6,10:16:48.12:732,48,0	0/0:15,0:15:45.12:0,45,881	0/0:10,0:10:30.08:0,30,573	0/0:16,0:16:48.15:0,48,1057	1/1:4,7:11:33.09:507,33,0	1/1:6,11:16:45.13:709,45,0	1/1:4,8:12:33.07:528,33,0	1/1:3,8:12:30.08:479,30,0	1/1:10,8:16:45.04:628,45,0	1/1:7,11:18:54.11:755,54,0	1/1:11,4:15:32.88:449,33,0	1/1:4,18:22:62.90:1024,63,0	0/0:19,0:19:54.15:0,54,1096	0/0:14,0:14:42.13:0,42,915	1/1:2,9:11:33.11:561,33,0	1/1:10,10:20:60.15:871,60,0	1/1:10,17:27:72.10:1082,72,0	1/1:3,2:4:11.93:117,12,0
chr10	40581556	.	GA	G	10422.93	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=14.646;DP=569;FS=2.357;HRun=2;HaplotypeScore=96.9704;InbreedingCoeff=0.9951;MQ=70.49;MQ0=5;MQRankSum=-6.887;QD=32.37;ReadPosRankSum=-0.325;VQSLOD=4.4486;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,27:31:63:879,63,0	1/1:1,8:9:27.07:332,27,0	0/0:45,0:25:62.71:0,63,851	0/0:41,0:26:58.07:0,58,845	1/1:1,21:22:60.17:746,60,0	0/0:22,0:22:66.21:0,66,968	0/0:28,0:28:84.24:0,84,1191	1/1:2,28:30:81.23:1028,81,0	0/0:27,0:27:78.16:0,78,1109	1/1:2,13:15:42.13:529,42,0	1/1:1,23:24:69.21:870,69,0	0/0:12,0:12:36.12:0,36,539	0/0:12,0:12:36.11:0,36,519	0/0:20,0:20:57.18:0,57,833	1/1:0,12:12:27.09:347,27,0	1/1:2,18:20:60.11:739,60,0	1/1:2,9:10:21.06:259,21,0	1/1:2,10:12:17.20:324,17,0	1/1:2,15:17:51.10:602,51,0	1/1:1,18:19:45.15:577,45,0	1/1:1,17:18:38.96:501,39,0	1/1:3,23:26:66.17:831,66,0	0/0:23,0:23:68.86:0,69,952	0/0:17,0:17:51.16:0,51,744	1/1:3,8:11:30.08:358,30,0	1/1:2,19:21:60.18:752,60,0	1/1:3,16:19:45.11:555,45,0	1/1:0,5:5:15.05:194,15,0
chr10	40583016	.	TC	T	2814.38	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=-1.560;DP=455;FS=18.441;HRun=10;HaplotypeScore=63.6692;InbreedingCoeff=0.7596;MQ=76.49;MQ0=0;MQRankSum=-0.204;QD=16.17;ReadPosRankSum=2.151;VQSLOD=2.5822;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:31:44.81:0,45,467	0/0:3,0:3:5.83:0,6,39	0/0:13,0:13:22.54:0,23,251	0/1:17,0:17:10.66:11,0,67	0/0:7,0:8:6.88:0,7,30	0/0:4,0:8:5.85:0,6,47	0/0:6,0:28:24.76:0,25,161	1/1:7,16:23:32.93:286,33,0	0/0:1,0:13:11.28:0,11,57	0/0:8,0:12:7.92:0,8,63	0/0:6,0:11:5.81:0,6,34	0/0:14,0:14:33.09:0,33,365	0/0:4,0:11:5.02:0,5,32	0/0:8,0:8:11.90:0,12,87	0/0:10,0:16:8.51:0,9,61	0/0:7,0:15:23.55:0,24,201	0/0:18,0:21:43.41:0,43,282	0/0:4,0:12:14.52:0,15,98	1/1:8,12:20:38.01:318,38,0	1/1:3,27:30:68.95:596,69,0	1/1:3,37:40:99:911,105,0	0/0:5,0:11:5.79:0,6,53	0/0:13,0:13:26.87:0,27,282	0/0:24,1:25:31.10:0,31,571	0/0:3,0:8:5.84:0,6,40	1/1:6,10:16:32.97:286,33,0	1/1:2,17:19:50.98:443,51,0	1/1:2,6:8:17.99:156,18,0
chr10	40583302	.	TTCTCTCTC	T	2024.03	PASS	AB=0.870;AC=20;AF=0.370;AN=54;BaseQRankSum=2.764;DP=602;FS=2.329;HRun=0;HaplotypeScore=151.0596;InbreedingCoeff=0.6775;MQ=66.16;MQ0=23;MQRankSum=-4.099;QD=9.92;ReadPosRankSum=0.476;VQSLOD=2.8791;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:34,0:34:22.16:163,22,0	0/0:4,0:9:6.02:0,6,151	0/0:42,0:17:6.01:0,6,71	0/0:53,0:17:5.85:0,6,74	0/0:22,0:22:8.70:0,9,240	1/1:5,0:8:9.33:127,9,0	0/1:16,0:16:58.09:58,0,97	1/1:28,5:32:7.30:156,7,0	1/1:12,0:20:24.55:448,25,0	0/0:27,0:26:51.13:0,51,1350	0/0:18,0:25:17.56:0,18,522	0/0:8,0:14:14.98:0,15,489	0/0:10,0:18:15.02:0,15,402	0/0:11,0:18:9.03:0,9,277	0/0:24,0:24:15.02:0,15,337	0/0:20,0:33:27.08:0,27,765	0/0:17,0:18:10.03:0,10,223	0/0:17,0:19:42.14:0,42,1202	1/1:18,0:16:1.31:99,1,0	1/1:11,5:17:18.01:342,18,0	./.	1/1:7,0:16:20.52:157,21,0	0/0:6,0:6:14.89:0,15,458	0/0:14,0:27:18.06:0,18,556	0/0:12,0:16:9.03:0,9,235	0/1:11,6:16:49.45:235,0,49	1/1:7,7:15:9.03:208,9,0	1/1:3,0:5:12.04:223,12,0
chr10	40583501	.	C	CTGTGTG	3175.21	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=1.902;DP=891;FS=10.131;HRun=0;HaplotypeScore=256.8136;InbreedingCoeff=0.8815;MQ=55.95;MQ0=9;MQRankSum=-4.783;QD=14.77;ReadPosRankSum=-2.843;VQSLOD=1.2674;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:81.19:0,81,1519	0/0:11,0:11:21.07:0,21,437	0/0:49,0:31:5.99:0,6,221	0/1:49,0:27:9.98:10,0,27	0/0:22,0:22:36.09:0,36,659	1/1:7,10:19:21.07:627,21,0	1/1:13,12:33:45.24:1172,45,0	0/0:36,0:37:36.54:0,37,700	1/1:19,11:35:21.07:521,21,0	0/0:44,0:44:66.22:0,66,1359	0/0:19,0:19:27.07:0,27,523	1/1:23,0:23:44.88:370,45,0	0/0:27,0:27:39.11:0,39,772	0/0:26,0:28:51.15:0,51,952	0/0:30,0:30:57.11:0,57,1161	0/0:23,0:23:17.18:0,17,631	0/0:34,0:33:41.38:0,41,1188	0/0:28,0:28:20.01:0,20,887	0/0:20,0:20:20.11:0,20,407	0/0:25,0:27:42.03:0,42,701	0/0:78,0:77:99:0,144,2861	0/0:38,0:38:81.03:0,81,1608	1/1:23,0:23:23.01:274,23,0	1/1:33,0:33:47.85:389,48,0	0/0:33,0:33:69.23:0,69,1436	0/0:30,0:30:60.20:0,60,1193	0/0:29,0:33:69.23:0,69,1359	0/0:17,0:18:18.06:0,18,354
chr10	40583523	.	G	GTGTA	5874.92	PASS	AB=0.997;AC=25;AF=0.446;AN=56;BaseQRankSum=-6.566;DP=847;FS=14.196;HRun=0;HaplotypeScore=222.0686;InbreedingCoeff=-0.3655;MQ=54.89;MQ0=13;MQRankSum=3.795;QD=9.22;ReadPosRankSum=-7.514;VQSLOD=0.6912;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:48,0:48:99:151,0,595	0/1:10,0:10:19:19,0,146	0/0:39,0:19:42.12:0,42,483	0/0:50,0:22:38.24:0,38,403	0/1:20,0:20:93.13:93,0,214	0/1:23,0:23:3.59:198,0,4	0/1:39,0:39:99:493,0,196	0/1:33,0:33:99:303,0,218	0/1:22,0:22:19.85:257,0,20	0/1:39,0:39:99:177,0,482	0/1:17,0:17:47.02:47,0,208	1/1:2,21:25:50.92:1234,51,0	0/0:23,0:23:54.04:0,54,838	0/0:30,0:30:72.12:0,72,1058	0/1:35,0:35:99:159,0,380	0/1:18,0:19:95.56:96,0,252	0/1:34,0:34:99:136,0,453	0/1:28,0:28:40.69:41,0,347	0/1:19,0:18:99:106,0,180	0/1:22,0:22:23.58:24,0,227	0/1:76,0:75:99:242,0,975	0/0:38,0:38:16.08:0,16,586	1/1:3,21:26:24.08:642,24,0	1/1:4,25:29:48.63:1288,49,0	0/1:28,0:28:18.02:18,0,498	0/1:29,0:29:96.13:96,0,366	0/0:29,0:29:3.78:0,4,486	0/1:15,0:15:55.93:56,0,106
chr10	40586733	.	G	GTC	2766.62	PASS	AB=0.766;AC=14;AF=0.269;AN=52;BaseQRankSum=-2.708;DP=530;FS=7.098;HRun=0;HaplotypeScore=71.2370;InbreedingCoeff=0.1420;MQ=34.17;MQ0=74;MQRankSum=-3.465;QD=13.11;ReadPosRankSum=0.114;VQSLOD=2.5186;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:15:9.03:0,9,123	1/1:5,1:5:5.78:60,6,0	./.	./.	0/0:20,0:13:3.01:0,3,40	0/0:12,0:9:11.93:0,12,165	0/0:20,0:16:11.68:0,12,123	1/1:15,13:19:45.13:689,45,0	0/0:21,0:17:18.05:0,18,233	0/1:18,7:23:99:403,0,213	0/0:4,5:9:0:0,0,0	0/0:28,0:22:27.08:0,27,371	0/0:19,0:12:21.02:0,21,251	0/0:25,0:18:11.94:0,12,162	0/0:22,0:15:6:0,6,64	0/0:20,0:17:27.07:0,27,341	0/0:24,0:14:3.01:0,3,41	0/1:14,1:9:29.71:30,0,42	0/1:7,6:11:17.19:272,0,17	0/1:15,7:20:79.51:252,0,80	0/1:32,4:20:29.16:136,0,29	0/0:22,0:16:18.04:0,18,219	0/0:23,0:21:15.05:0,15,201	0/0:29,0:22:20.96:0,21,289	1/1:7,5:10:6.02:106,6,0	0/1:13,8:14:14.13:353,0,14	0/1:11,9:16:35.63:341,0,36	0/1:6,7:9:2.75:279,0,3
chr10	40586747	.	GTC	G	1100.87	PASS	AB=0.777;AC=23;AF=0.500;AN=46;BaseQRankSum=0.614;DP=486;FS=0.000;HRun=0;HaplotypeScore=71.6553;InbreedingCoeff=-0.0876;MQ=29.22;MQ0=87;MQRankSum=-1.632;QD=3.74;ReadPosRankSum=-3.204;VQSLOD=1.0561;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:13,10:14:42.75:69,0,43	0/0:3,1:3:0.47:0,0,1	./.	./.	./.	1/1:8,1:6:6.01:66,6,0	1/1:9,9:13:2.91:32,3,0	1/1:10,12:14:20.68:185,21,0	0/1:13,5:14:28.48:100,0,28	0/1:17,6:20:61.89:62,0,375	./.	0/0:29,0:22:17.54:0,18,226	1/1:11,6:9:9.03:114,9,0	1/1:15,8:15:2.90:39,3,0	./.	0/1:10,6:12:31.48:70,0,31	0/0:22,4:15:5.89:0,6,67	0/1:12,2:8:11.45:11,0,60	0/1:6,5:9:31:139,0,31	0/1:15,4:16:67.97:68,0,122	0/0:34,0:17:2.93:0,3,34	1/1:9,5:10:6.02:72,6,0	0/0:19,0:16:6.02:0,6,94	0/0:30,1:22:19.48:0,19,204	0/1:8,2:8:0:0,0,0	0/1:15,7:12:34.15:115,0,34	0/1:15,7:16:31.53:88,0,32	0/1:9,3:7:12.08:12,0,30
chr10	40586757	.	GTC	G	553.68	PASS	AB=0.833;AC=16;AF=0.381;AN=42;BaseQRankSum=0.654;DP=458;FS=0.000;HRun=0;HaplotypeScore=71.9209;InbreedingCoeff=-0.1290;MQ=25.78;MQ0=93;MQRankSum=-0.698;QD=2.35;ReadPosRankSum=-2.377;VQSLOD=1.0546;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:11,10:14:3.01:0,3,52	0/0:3,1:3:0.89:0,1,2	./.	./.	./.	0/0:7,0:4:2.84:0,3,14	0/0:18,0:11:0.46:0,0,1	0/1:10,4:8:0:0,0,0	0/0:18,0:14:3.01:0,3,36	0/1:16,3:16:75.30:75,0,422	./.	1/1:17,10:20:4.12:42,4,0	1/1:11,7:10:5.96:53,6,0	0/1:16,7:15:0.02:0,0,0	./.	0/0:8,5:9:4.26:0,4,40	0/0:25,2:16:6.49:0,6,100	0/1:15,1:9:30.58:31,0,90	0/1:8,1:7:41.30:41,0,46	0/1:12,3:12:10.89:11,0,143	0/0:30,0:13:2.91:0,3,23	1/1:7,5:8:6.02:71,6,0	./.	0/1:28,6:25:88.96:103,0,89	./.	0/1:13,6:9:39.46:76,0,39	0/1:17,4:13:36.11:145,0,36	0/1:6,2:3:24.40:24,0,36
chr10	40586767	.	GTC	G	93.47	PASS	AB=0.881;AC=13;AF=0.342;AN=38;BaseQRankSum=2.815;DP=436;FS=1.307;HRun=0;HaplotypeScore=75.1801;InbreedingCoeff=-0.0010;MQ=23.01;MQ0=101;MQRankSum=-0.542;QD=0.51;ReadPosRankSum=-3.365;VQSLOD=1.0268;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:12,9:14:3:0,3,52	0/0:4,0:3:0.47:0,0,1	./.	./.	./.	./.	0/0:18,0:11:0.47:0,0,1	./.	0/0:18,0:14:0:0,0,0	0/1:14,2:13:21.11:21,0,395	./.	0/0:14,13:19:2.40:0,2,9	1/1:12,4:7:5.98:47,6,0	0/1:17,4:13:0.02:0,0,0	./.	1/1:9,5:10:4.35:14,4,0	0/1:26,2:16:7.05:7,0,75	0/1:16,1:9:35.82:36,0,138	0/1:6,1:4:23.25:23,0,59	0/0:13,0:9:9.03:0,9,136	0/0:29,0:11:2.93:0,3,51	1/1:8,4:7:2.99:24,3,0	./.	0/1:22,9:22:13.74:14,0,90	./.	0/1:18,1:8:18.12:18,0,29	0/0:21,2:14:14.61:0,15,71	0/0:8,0:2:1.55:0,2,4
chr10	40586777	.	GTC	G	444.36	PASS	AB=0.908;AC=18;AF=0.409;AN=44;BaseQRankSum=1.337;DP=440;FS=0.000;HRun=0;HaplotypeScore=78.5586;InbreedingCoeff=0.0201;MQ=22.78;MQ0=100;MQRankSum=-1.634;QD=2.04;ReadPosRankSum=-1.945;VQSLOD=1.0819;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,3:16:2.91:0,3,52	0/0:5,1:4:0.47:0,0,1	./.	./.	./.	0/1:8,0:5:0.02:0,0,0	0/0:18,4:15:0.47:0,0,1	1/1:5,1:1:2.98:21,3,0	1/1:13,0:9:2.67:13,3,0	0/1:14,4:15:99:106,0,302	./.	1/1:14,13:19:0.99:31,1,0	1/1:7,4:4:2.97:20,3,0	0/1:15,2:11:0.02:0,0,0	./.	1/1:13,3:12:15.38:125,15,0	0/1:25,2:15:16.90:22,0,17	0/1:16,1:8:78.84:79,0,135	0/1:9,1:4:27.40:27,0,55	0/0:9,1:5:6.02:0,6,102	0/0:31,0:11:2.93:0,3,51	./.	0/0:6,10:11:0:0,0,0	0/0:20,6:20:2.58:0,3,24	0/0:12,1:10:3:0,3,26	0/1:20,2:13:13.51:87,0,14	0/1:19,4:14:5.83:28,0,6	0/0:7,0:1:1.55:0,2,4
chr10	40586787	.	GTC	G	443.42	PASS	AB=0.914;AC=17;AF=0.370;AN=46;BaseQRankSum=0.600;DP=449;FS=0.000;HRun=0;HaplotypeScore=86.3701;InbreedingCoeff=0.0155;MQ=24.95;MQ0=101;MQRankSum=-0.534;QD=1.65;ReadPosRankSum=-1.044;VQSLOD=1.5086;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:19,4:17:31.91:34,0,32	0/0:6,1:4:0.71:0,1,2	./.	./.	1/1:25,5:15:2.59:24,3,0	0/0:10,0:5:0.86:0,1,3	0/0:20,1:15:0:0,0,0	0/1:11,3:11:8.57:97,0,9	0/0:14,0:11:7.74:0,8,45	0/1:14,2:13:54.18:54,0,207	0/0:8,3:4:2.94:0,3,18	1/1:16,7:16:4.68:23,5,0	0/1:15,0:6:12.22:44,0,12	1/1:14,1:11:3.82:12,4,0	./.	1/1:19,1:15:18.59:112,19,0	0/1:23,4:15:9.41:62,0,9	0/1:15,1:7:55.76:56,0,111	0/0:7,0:2:3.45:0,3,22	0/0:10,2:7:6.39:0,6,39	0/0:32,0:12:2.92:0,3,43	./.	0/0:7,7:10:0:0,0,0	0/1:22,3:16:0.11:0,0,0	0/0:16,1:14:8.90:0,9,64	0/1:21,1:14:20.63:40,0,21	0/1:22,0:13:1.63:9,0,2	./.
chr10	40586795	.	CTG	C	769.55	PASS	AB=0.988;AC=29;AF=0.580;AN=50;BaseQRankSum=0.496;DP=494;FS=33.846;HRun=0;HaplotypeScore=93.7831;InbreedingCoeff=0.1310;MQ=27.84;MQ0=105;MQRankSum=0.532;QD=2.12;ReadPosRankSum=1.564;VQSLOD=0.0883;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:20:1.36:1,0,57	1/1:9,1:7:2.92:17,3,0	./.	./.	0/1:28,0:14:0.38:0,0,0	1/1:11,0:5:0.64:2,1,0	1/1:24,0:16:2.78:20,3,0	0/1:33,0:28:99:107,0,133	1/1:16,0:12:1.99:21,2,0	0/1:16,0:14:79.27:159,0,79	1/1:11,0:5:2.02:7,2,0	0/1:23,2:17:0.58:41,0,1	0/1:11,0:5:1.57:4,0,2	1/1:17,0:14:6.95:45,7,0	./.	1/1:22,0:16:11.16:83,11,0	0/1:27,0:15:35:39,0,35	0/1:17,0:7:48.05:48,0,48	0/1:9,0:4:12.10:12,0,15	0/0:12,0:7:5.81:0,6,28	0/0:32,0:12:1.63:0,2,19	0/0:10,0:8:5.85:0,6,36	0/0:20,0:16:2.96:0,3,19	0/0:28,0:19:8.50:0,9,66	1/1:20,0:16:7.23:35,7,0	1/1:21,0:14:20.43:159,20,0	1/1:17,1:10:14.66:105,15,0	0/0:8,0:1:0:0,0,0
chr10	40586803	.	C	CTG	693.04	PASS	AB=0.885;AC=10;AF=0.208;AN=48;BaseQRankSum=-0.787;DP=529;FS=4.650;HRun=0;HaplotypeScore=99.4385;InbreedingCoeff=0.2700;MQ=29.64;MQ0=116;MQRankSum=-1.989;QD=3.43;ReadPosRankSum=0.445;VQSLOD=2.0560;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:24:21.56:0,22,164	0/0:10,0:7:2.92:0,3,18	./.	./.	1/1:30,0:16:2.78:13,3,0	0/0:14,0:9:2.22:0,2,12	0/0:21,0:13:2.66:0,3,24	0/1:35,0:29:99:187,0,117	0/0:17,0:13:8.63:0,9,48	0/0:18,0:15:33.56:0,34,311	0/0:11,0:5:2.76:0,3,20	1/1:29,1:22:20.84:259,21,0	0/0:12,0:6:6.88:0,7,38	0/0:18,0:14:7.34:0,7,44	./.	1/1:23,0:16:7.70:180,8,0	0/1:31,0:17:2.10:95,0,2	0/0:17,0:7:8.67:0,9,127	0/0:10,0:6:14.74:0,15,101	0/0:12,0:6:1.25:0,1,17	0/0:30,0:12:5.86:0,6,35	0/0:9,0:6:6.02:0,6,75	0/1:16,5:18:18.22:49,0,18	0/1:21,7:21:9.96:47,0,10	0/0:24,0:18:11.62:0,12,94	0/0:21,0:16:27.49:0,27,260	0/0:17,0:9:14.85:0,15,127	./.
chr10	40586831	.	CTCT	C	2555.28	PASS	AB=0.964;AC=34;AF=0.607;AN=56;BaseQRankSum=-1.193;DP=575;FS=28.202;HRun=0;HaplotypeScore=99.0347;InbreedingCoeff=0.1281;MQ=48.90;MQ0=103;MQRankSum=3.996;QD=5.74;ReadPosRankSum=3.868;VQSLOD=0.6401;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:38,0:26:25.44:345,25,0	0/1:10,0:6:23.31:37,0,23	0/0:23,0:16:8.87:0,9,360	0/0:28,0:10:26.39:0,26,289	1/1:11,9:14:2.86:56,3,0	1/1:18,0:12:1.16:2,1,0	1/1:23,0:17:5.62:40,6,0	0/1:42,0:34:99:380,0,363	1/1:17,0:13:11.40:89,11,0	0/1:19,0:13:99:153,0,125	1/1:13,0:8:2.75:20,3,0	0/0:25,0:21:30.52:0,31,397	1/1:21,0:12:1.71:39,2,0	1/1:19,0:11:13:109,13,0	0/1:14,4:12:0:0,0,0	1/1:23,0:14:30.73:266,31,0	0/1:24,3:19:19.63:208,0,20	0/1:16,0:10:60.19:138,0,60	0/1:9,0:6:16.72:64,0,17	1/1:12,0:6:2.33:39,2,0	1/1:20,0:9:8.80:119,9,0	1/1:9,0:6:6.88:64,7,0	0/0:15,0:12:6.02:0,6,103	0/0:29,0:24:24.08:0,24,383	0/1:27,0:22:43.33:43,0,52	0/1:23,0:20:99:266,0,183	0/1:19,0:11:1.47:246,0,1	0/0:9,0:1:2.94:0,3,18
chr10	40586833	.	CT	C	3067.84	PASS	AB=0.776;AC=36;AF=0.643;AN=56;BaseQRankSum=-1.271;DP=565;FS=20.101;HRun=1;HaplotypeScore=88.2783;InbreedingCoeff=0.2159;MQ=55.21;MQ0=102;MQRankSum=2.388;QD=7.05;ReadPosRankSum=4.588;VQSLOD=-0.7435;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,26:25:33.54:429,34,0	0/1:6,4:6:8.32:37,0,8	0/0:25,0:18:28.09:0,28,456	0/0:31,0:13:35.72:0,36,374	1/1:18,2:14:2.96:22,3,0	1/1:17,1:12:1.62:2,2,0	1/1:20,3:18:5.58:59,6,0	0/1:24,14:30:99:427,0,327	1/1:18,0:14:11.67:112,12,0	0/1:10,7:11:60.87:245,0,61	1/1:12,1:8:2.97:21,3,0	0/0:22,0:19:32.31:0,32,393	1/1:17,4:12:8.61:48,9,0	1/1:14,4:10:13.06:96,13,0	1/1:14,4:12:0.47:1,0,0	1/1:12,11:14:34.04:342,34,0	0/1:25,4:20:55.48:133,0,55	0/1:7,8:8:42.51:142,0,43	0/1:3,4:4:12.52:70,0,13	1/1:7,6:7:2.68:39,3,0	1/1:13,7:9:8.79:119,9,0	1/1:3,6:6:9.03:124,9,0	0/0:14,0:11:9.03:0,9,119	0/0:29,0:23:24.08:0,24,327	0/1:23,1:19:35.91:69,0,36	0/1:23,2:22:99:396,0,152	1/1:7,12:11:23.52:308,24,0	0/0:3,6:1:2.92:0,3,17
chr10	40586834	.	T	TC	3467	PASS	AB=0.749;AC=38;AF=0.679;AN=56;BaseQRankSum=-1.889;DP=558;FS=6.729;HRun=1;HaplotypeScore=88.9426;InbreedingCoeff=0.2981;MQ=55.65;MQ0=99;MQRankSum=-0.372;QD=8.10;ReadPosRankSum=3.530;VQSLOD=1.0271;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:35,2:25:32.06:327,32,0	1/1:9,1:6:2.19:39,2,0	0/0:25,0:18:35.27:0,35,453	0/0:31,0:13:35.27:0,35,377	1/1:16,3:14:2.68:11,3,0	1/1:7,11:12:2.19:5,2,0	1/1:9,13:17:5.76:61,6,0	0/1:34,2:28:99:461,0,213	1/1:3,14:13:12.04:169,12,0	0/1:12,5:11:17.79:235,0,18	1/1:4,9:8:3.01:45,3,0	0/0:22,0:20:32.87:0,33,350	1/1:7,13:12:12.04:173,12,0	1/1:9,8:9:11.95:131,12,0	1/1:11,7:12:0.47:1,0,0	1/1:12,11:14:33.11:439,33,0	0/1:13,15:19:38.70:178,0,39	0/1:13,2:8:23.86:145,0,24	1/1:7,0:4:9.04:64,9,0	1/1:10,3:7:2.72:40,3,0	1/1:19,0:8:10.58:124,11,0	1/1:9,0:6:8:58,8,0	0/0:14,0:11:8.96:0,9,94	0/0:29,0:23:24.01:0,24,287	0/1:8,16:19:26.61:118,0,27	0/1:10,14:22:74.19:371,0,74	1/1:20,1:13:23.97:270,24,0	0/0:9,0:1:1.25:0,1,3
chr10	40589811	.	T	TC	1580.59	PASS	AB=0.623;AC=24;AF=0.429;AN=56;BaseQRankSum=-5.794;DP=342;FS=2.690;HRun=9;HaplotypeScore=55.7191;InbreedingCoeff=0.4943;MQ=75.37;MQ0=2;MQRankSum=-2.563;QD=10.07;ReadPosRankSum=-4.322;VQSLOD=1.2910;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:29.99:0,30,260	0/1:3,4:7:3.73:58,0,4	0/0:18,0:13:13.80:0,14,98	0/0:23,0:20:25.06:0,25,191	0/0:4,0:15:23.05:0,23,75	0/0:9,0:9:11.96:0,12,100	0/0:17,0:17:29.96:0,30,259	1/1:9,7:16:21.22:241,21,0	0/0:6,0:6:11.98:0,12,100	1/1:4,4:8:9.02:99,9,0	0/1:2,3:5:14.02:87,0,14	1/1:6,0:6:5.77:51,6,0	0/0:18,0:18:32.14:0,32,279	0/0:12,0:13:19.51:0,20,158	0/0:0,0:6:12.22:0,12,36	0/0:2,0:13:18.33:0,18,54	0/0:3,0:17:26.48:0,26,77	1/1:12,7:19:18.96:378,19,0	0/1:8,6:14:27.83:148,0,28	1/1:3,7:10:9.02:99,9,0	0/1:8,15:23:4.99:174,0,5	0/0:11,0:11:29.97:0,30,255	1/1:5,0:5:1.49:19,1,0	1/1:12,0:15:10.22:71,10,0	1/1:5,0:5:3.46:25,3,0	0/1:2,6:8:11.02:117,0,11	1/1:0,7:7:9.02:100,9,0	0/1:3,6:9:11.04:105,0,11
chr10	40589865	.	CGTGTGT	C	293.03	PASS	AB=0.886;AC=6;AF=0.120;AN=50;BaseQRankSum=2.208;DP=403;FS=13.445;HRun=0;HaplotypeScore=98.9887;InbreedingCoeff=0.3797;MQ=54.57;MQ0=14;MQRankSum=-4.185;QD=5.43;ReadPosRankSum=-1.589;VQSLOD=1.0294;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:18:9.03:0,9,226	0/0:6,0:6:3.01:0,3,79	./.	./.	0/0:14,0:13:4.55:0,5,165	1/1:3,4:7:6.02:123,6,0	0/1:12,5:17:54.33:173,0,54	0/0:17,0:16:16.61:0,17,463	1/1:9,2:12:6.02:104,6,0	0/0:12,0:13:21.53:0,22,531	0/0:9,0:10:12.04:0,12,303	0/0:11,0:11:24.08:0,24,632	0/0:11,0:10:12.51:0,13,326	0/0:17,0:21:15.40:0,15,339	0/0:13,0:14:2.34:0,2,77	0/0:16,0:15:11.99:0,12,239	0/0:18,0:17:7.58:0,8,156	0/0:20,0:22:27.98:0,28,726	./.	0/0:9,0:10:5.52:0,6,172	0/0:22,0:22:9.02:0,9,249	0/1:18,0:17:0:0,0,0	0/0:6,0:5:9.03:0,9,287	0/0:21,0:20:42.14:0,42,1278	0/0:6,0:11:3.01:0,3,78	0/0:19,0:18:39.98:0,40,891	0/0:9,0:11:21.04:0,21,446	0/0:2,0:3:6.02:0,6,136
chr10	40592323	.	C	CTT	5235.89	PASS	AB=0.665;AC=43;AF=0.768;AN=56;BaseQRankSum=2.361;DP=630;FS=0.596;HRun=14;HaplotypeScore=117.2705;InbreedingCoeff=0.5833;MQ=66.71;MQ0=1;MQRankSum=-2.272;QD=9.95;ReadPosRankSum=-2.750;VQSLOD=2.9001;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,34:54:65.45:710,65,0	1/1:11,0:11:19.27:176,19,0	0/0:22,0:18:1.83:0,2,102	0/0:10,0:12:4.54:0,5,26	1/1:11,7:20:21.50:161,21,0	0/0:11,0:16:8.95:0,9,128	0/0:25,0:26:26.43:0,26,266	1/1:28,0:29:27.43:254,27,0	0/0:25,0:26:32.04:0,32,261	1/1:22,0:22:36.01:352,36,0	1/1:10,0:18:33.06:347,33,0	1/1:4,0:27:16.90:60,17,0	0/1:3,0:14:14.98:15,0,15	0/1:6,0:21:17.27:17,0,40	1/1:6,12:18:19.25:210,19,0	1/1:10,14:25:14.99:174,15,0	1/1:10,23:39:38.31:427,38,0	1/1:16,0:24:13.26:118,13,0	1/1:14,0:15:15.02:143,15,0	1/1:12,0:21:39.06:387,39,0	1/1:10,0:10:6.73:34,7,0	1/1:8,12:22:21.48:249,21,0	0/1:18,2:23:56.91:90,0,57	1/1:9,3:36:21.21:228,21,0	1/1:8,0:13:16.74:147,17,0	1/1:28,0:28:42.04:395,42,0	1/1:19,0:19:33.93:320,34,0	1/1:13,0:13:21.03:221,21,0
chr10	40592823	.	C	CTT	3750.29	PASS	AB=0.688;AC=38;AF=0.679;AN=56;BaseQRankSum=0.819;DP=609;FS=5.580;HRun=13;HaplotypeScore=89.0331;InbreedingCoeff=0.2604;MQ=70.86;MQ0=1;MQRankSum=-0.955;QD=7.09;ReadPosRankSum=-2.999;VQSLOD=0.4008;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:11,30:45:27.55:561,28,0	1/1:1,1:8:1.49:55,1,0	0/0:13,0:11:8.03:0,8,57	0/1:16,0:14:1.65:2,0,3	1/1:1,14:16:26.44:270,26,0	0/0:24,0:28:33.52:0,34,388	0/0:14,0:14:6.76:0,7,210	0/1:15,1:33:1.67:208,0,2	0/0:22,0:23:44.52:0,45,377	1/1:6,0:21:31.10:133,31,0	0/1:3,2:17:0.68:128,0,1	1/1:4,0:16:6.10:56,6,0	1/1:8,1:26:15.70:115,16,0	1/1:6,1:19:5.95:46,6,0	1/1:5,12:25:16.88:237,17,0	1/1:5,14:23:6.13:308,6,0	1/1:6,19:27:36.07:468,36,0	1/1:8,0:32:18.31:117,18,0	0/1:10,0:24:26.05:99,0,26	0/1:12,1:29:45.42:120,0,45	0/1:6,0:10:0.58:121,0,1	1/1:7,15:25:35.37:329,35,0	0/1:8,1:22:4.95:73,0,5	1/1:6,0:13:5.23:88,5,0	1/1:6,1:21:13.88:77,14,0	0/1:9,0:18:49.57:67,0,50	0/1:13,1:35:25.03:72,0,25	0/1:2,0:6:0.14:0,0,44
chr10	40594093	.	T	TTG	1368.19	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.067;DP=749;FS=7.135;HRun=0;HaplotypeScore=182.2547;InbreedingCoeff=0.7318;MQ=67.85;MQ0=4;MQRankSum=-9.038;QD=18.49;ReadPosRankSum=-2.219;VQSLOD=2.8629;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:26,19:46:36.78:805,37,0	0/0:7,0:7:4.09:0,4,39	0/0:28,0:23:16.66:0,17,168	0/0:24,0:16:24.94:0,25,270	0/0:25,0:25:12.01:0,12,84	0/0:21,0:20:36.20:0,36,261	0/0:29,0:29:3.74:0,4,159	0/0:26,0:26:39.85:0,40,377	0/0:32,0:32:41.08:0,41,297	0/0:30,0:30:72.36:0,72,495	0/0:17,0:17:16.81:0,17,117	0/0:35,0:36:87.09:0,87,1027	0/0:32,0:32:41.33:0,41,183	0/0:35,0:35:8.67:0,9,170	0/0:15,0:15:13.17:0,13,146	0/0:14,0:14:12.96:0,13,69	0/0:38,0:38:73.58:0,74,445	0/0:39,0:39:45.90:0,46,357	0/0:28,0:27:30.05:0,30,311	0/0:21,0:21:27.24:0,27,167	0/0:45,0:45:59.43:0,59,321	1/1:9,18:28:45.15:683,45,0	0/0:20,0:20:22.41:0,22,410	0/0:39,0:40:99:0,105,1225	0/0:24,0:24:34.14:0,34,174	0/0:21,0:21:3.72:0,4,175	0/0:19,0:19:23.62:0,24,168	0/0:9,0:9:10.87:0,11,48
chr10	40594106	.	T	TGC	835.83	PASS	AB=0.982;AC=11;AF=0.196;AN=56;BaseQRankSum=3.922;DP=740;FS=9.796;HRun=0;HaplotypeScore=186.3236;InbreedingCoeff=0.1743;MQ=62.90;MQ0=4;MQRankSum=-5.599;QD=2.94;ReadPosRankSum=-4.759;VQSLOD=0.4302;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:41,0:41:30.50:382,30,0	0/1:9,0:9:34.58:35,0,56	0/0:24,0:18:15.10:0,15,323	0/0:21,0:13:30.03:0,30,391	0/0:25,0:25:13.61:0,14,108	0/0:22,0:21:34.50:0,35,299	0/1:28,1:29:20.89:21,0,208	0/1:27,0:27:47.03:47,0,650	0/0:29,0:29:19.88:0,20,315	0/0:32,0:32:31.72:0,32,598	0/0:18,0:18:2.97:0,3,132	0/0:35,0:35:96.20:0,96,1371	0/0:33,0:33:54.85:0,55,241	0/1:36,1:37:18.07:18,0,162	0/0:14,0:14:16.20:0,16,189	0/0:15,0:15:15.65:0,16,77	0/0:38,0:38:2.59:0,3,422	0/1:41,1:42:2.70:3,0,363	0/0:25,0:24:52.83:0,53,633	0/0:23,0:23:26.34:0,26,171	0/1:48,0:48:1.42:1,0,340	1/1:28,0:28:21.98:362,22,0	0/0:14,0:14:5.57:0,6,534	0/0:43,0:43:99:0,123,1697	0/0:20,0:20:33.50:0,33,160	0/1:22,1:23:99:117,0,217	0/0:18,0:18:7.55:0,8,178	0/0:7,0:7:6.99:0,7,31
chr10	40594110	.	C	CGT	10429.20	PASS	AB=1.000;AC=47;AF=0.839;AN=56;BaseQRankSum=9.877;DP=737;FS=7.487;HRun=0;HaplotypeScore=152.9332;InbreedingCoeff=0.8254;MQ=63.34;MQ0=4;MQRankSum=-1.273;QD=16.66;ReadPosRankSum=2.527;VQSLOD=4.6793;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:41,0:41:40.16:409,40,0	1/1:9,1:10:18.05:196,18,0	0/0:21,0:15:3.47:0,3,13	0/1:20,0:12:8.34:8,0,38	1/1:23,1:24:14.07:138,14,0	1/1:22,0:21:30.08:332,30,0	1/1:31,0:31:51.13:552,51,0	1/1:25,0:25:49.56:377,50,0	1/1:30,0:30:50.50:539,51,0	1/1:33,0:33:82.40:794,82,0	1/1:15,1:16:27.07:316,27,0	0/0:35,0:35:99:0,99,1194	1/1:33,0:33:63.17:697,63,0	1/1:38,1:39:66.17:722,66,0	1/1:12,0:12:21.05:228,21,0	1/1:16,0:16:21.06:231,21,0	1/1:38,0:38:71.41:769,71,0	1/1:40,0:40:86.29:885,86,0	1/1:21,0:21:48.14:407,48,0	1/1:24,0:24:34.38:393,34,0	1/1:50,0:50:72.19:797,72,0	1/1:26,1:27:33.08:348,33,0	0/0:13,0:13:33.01:0,33,384	0/0:42,0:42:99:0,102,1166	1/1:23,0:23:36.10:399,36,0	1/1:25,0:25:32.89:461,33,0	1/1:19,0:19:26.76:296,27,0	1/1:7,0:7:12.03:133,12,0
chr10	40594116	.	T	TGTGC	25969.28	PASS	AB=1.000;AC=47;AF=0.839;AN=56;BaseQRankSum=-10.403;DP=738;FS=7.203;HRun=0;HaplotypeScore=115.5393;InbreedingCoeff=0.8370;MQ=63.91;MQ0=4;MQRankSum=-2.377;QD=40.58;ReadPosRankSum=3.386;VQSLOD=5.1712;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,29:43:36.11:898,36,0	1/1:1,11:12:17.74:488,18,0	0/0:14,0:10:7.06:0,7,40	0/1:14,0:10:11.59:12,0,44	1/1:3,19:26:14.08:340,14,0	1/1:0,19:19:30.57:837,31,0	1/1:2,28:33:48.16:1312,48,0	1/1:1,18:21:60.02:783,60,0	1/1:2,25:28:50.54:1347,51,0	1/1:2,25:32:86.93:1858,87,0	1/1:1,13:16:26.83:681,27,0	0/0:35,0:35:99:0,99,1681	1/1:2,31:35:63.22:1756,63,0	1/1:2,39:41:66.23:1799,66,0	1/1:1,10:11:21.07:579,21,0	1/1:0,15:17:21.07:584,21,0	1/1:6,32:39:71.46:1930,71,0	1/1:3,39:44:88.33:2279,88,0	1/1:2,20:24:62.54:917,63,0	1/1:1,22:24:34.40:997,34,0	1/1:1,50:52:72.25:2009,72,0	1/1:5,22:28:33.11:897,33,0	0/0:11,0:11:33.03:0,33,567	0/0:38,0:38:99:0,114,1703	1/1:0,23:24:36.12:1004,36,0	1/1:3,25:28:78.18:1578,78,0	1/1:0,18:18:26.69:749,27,0	1/1:0,6:8:12.04:335,12,0
chr10	40595472	.	TTCTCTCTCTCTCTCTCTCTCTCTCTCTC	T	5245.54	PASS	AB=0.843;AC=25;AF=0.481;AN=52;BaseQRankSum=7.118;DP=565;FS=5.430;HRun=0;HaplotypeScore=352.9598;InbreedingCoeff=0.6071;MQ=56.90;MQ0=13;MQRankSum=-2.949;QD=21.86;ReadPosRankSum=-3.209;VQSLOD=1.6840;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:21.04:0,21,982	1/1:6,4:11:12.04:865,12,0	0/0:20,0:12:6.02:0,6,217	./.	0/0:22,0:22:9.03:0,9,492	0/1:9,0:14:5.02:5,0,114	0/0:17,0:19:9.03:0,9,177	./.	0/0:13,0:18:19.69:0,20,265	1/1:18,9:27:17.62:548,18,0	1/1:10,2:12:4.26:219,4,0	0/0:19,0:19:12.04:0,12,423	1/1:9,0:11:3.01:123,3,0	0/1:17,0:23:9.92:523,0,10	0/0:18,0:18:21.75:0,22,1255	0/0:21,0:21:40.67:0,41,3191	0/0:22,0:22:30.10:0,30,2484	1/1:7,0:7:3.01:76,3,0	1/1:13,1:13:3.01:216,3,0	1/1:20,6:26:7.27:435,7,0	0/1:28,0:27:0.01:0,0,0	0/0:21,0:21:5.13:0,5,406	0/0:26,0:25:33.11:0,33,1824	0/0:31,0:32:15.05:0,15,464	1/1:10,7:17:9.03:649,9,0	1/1:13,8:21:21.02:941,21,0	1/1:9,6:15:0.81:213,1,0	1/1:10,3:10:6.02:433,6,0
chr10	40595514	.	CTCTCTCTCTCTGTGTG	C	1972.22	PASS	AB=0.996;AC=20;AF=0.370;AN=54;BaseQRankSum=7.325;DP=569;FS=6.185;HRun=0;HaplotypeScore=216.3923;InbreedingCoeff=-0.3657;MQ=46.59;MQ0=35;MQRankSum=-3.467;QD=5.90;ReadPosRankSum=5.448;VQSLOD=1.9200;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:31:5.96:0,6,44	0/1:9,0:8:99:216,0,144	0/0:30,0:1:3.01:0,3,63	0/0:19,0:1:0.47:0,0,1	1/1:3,20:23:9.89:197,10,0	0/1:17,0:15:46.25:46,0,207	0/0:22,0:19:15.52:0,16,358	0/0:29,0:26:77.07:0,77,1635	0/1:23,0:23:99:146,0,799	0/1:26,0:25:41.12:41,0,1234	0/1:7,0:7:52.77:53,0,121	0/0:23,0:23:6.74:0,7,50	0/1:13,0:12:33.60:34,0,482	0/1:17,0:17:99:205,0,484	0/0:20,0:19:8.64:0,9,119	0/1:20,0:20:99:366,0,637	0/1:30,0:29:97.66:98,0,495	0/0:7,0:7:15.05:0,15,323	0/1:10,0:9:25.60:26,0,429	0/1:24,0:23:88.87:89,0,641	0/0:22,0:22:5.89:0,6,214	1/1:26,0:25:5.67:92,6,0	0/1:28,0:28:55.78:56,0,135	./.	0/1:15,0:14:99:156,0,313	0/1:19,0:19:99:178,0,693	0/1:17,0:17:25.61:26,0,568	0/1:8,0:7:81.96:106,0,82
chr10	40595518	.	CTCTCTCTGTGTG	C	1155.59	PASS	AB=0.967;AC=18;AF=0.346;AN=52;BaseQRankSum=6.936;DP=587;FS=8.748;HRun=0;HaplotypeScore=205.0968;InbreedingCoeff=-0.2728;MQ=46.61;MQ0=35;MQRankSum=-5.539;QD=3.69;ReadPosRankSum=6.781;VQSLOD=0.6275;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/1:10,0:9:99:102,0,180	0/0:35,0:1:3.01:0,3,63	0/0:18,0:1:0.47:0,0,1	1/1:22,0:22:9.48:158,9,0	0/1:18,0:16:18.28:18,0,207	0/0:22,0:19:15.05:0,15,357	0/0:31,0:28:82.98:0,83,1782	0/1:27,0:27:10.54:11,0,1007	0/0:28,0:26:17.60:0,18,1324	0/1:9,0:9:22:22,0,193	0/1:3,0:23:8.71:17,0,9	0/1:13,0:12:5.65:6,0,482	0/1:17,0:17:93.65:94,0,485	0/0:19,0:18:5.49:0,5,39	0/1:17,0:17:99:419,0,309	0/1:28,0:27:99:105,0,156	0/0:8,0:8:18.06:0,18,383	0/0:12,0:11:8.30:0,8,560	0/1:28,0:27:22.35:22,0,853	0/0:23,0:23:6.16:0,6,214	1/1:5,22:26:4.32:100,4,0	0/1:27,0:26:39.62:59,0,40	./.	0/1:18,0:17:63.13:63,0,530	0/1:21,0:21:60.27:60,0,824	0/0:17,0:17:2.38:0,2,570	0/1:8,0:7:49.74:50,0,82
chr10	40595520	.	CTCTCTGTG	C	742.70	PASS	AB=1.000;AC=17;AF=0.327;AN=52;BaseQRankSum=7.053;DP=600;FS=10.092;HRun=0;HaplotypeScore=189.9017;InbreedingCoeff=0.0175;MQ=47.74;MQ0=38;MQRankSum=-4.407;QD=3.01;ReadPosRankSum=6.783;VQSLOD=1.1685;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/1:10,0:9:61.76:62,0,104	0/0:38,0:1:3.01:0,3,41	0/0:22,0:2:2.22:0,2,7	1/1:22,0:22:9.03:105,9,0	0/1:18,0:16:8.28:8,0,134	0/0:23,0:20:18.06:0,18,288	0/0:33,0:30:87.56:0,88,1292	0/0:28,0:28:15.91:0,16,724	0/0:29,0:27:35.91:0,36,927	0/1:9,0:9:10.75:11,0,122	1/1:23,0:23:2.45:40,2,0	0/0:13,0:12:5.55:0,6,318	0/1:18,0:18:47.42:47,0,359	0/0:19,0:18:0.63:0,1,2	0/1:16,0:16:99:252,0,142	0/1:30,0:29:40.32:98,0,40	0/0:8,0:8:17.98:0,18,250	0/0:12,0:11:15.39:0,15,374	0/0:28,0:27:0.84:0,1,553	0/0:24,0:24:7.41:0,7,144	1/1:27,0:26:3.48:58,3,0	1/1:5,21:25:6.92:133,7,0	./.	0/1:18,0:17:31.44:31,0,343	0/1:22,0:22:18.50:18,0,560	0/0:17,0:17:12:0,12,385	0/1:8,0:7:29.41:29,0,45
chr10	40595524	.	CTGTGTG	C	746.45	PASS	AB=1.000;AC=12;AF=0.231;AN=52;BaseQRankSum=-0.766;DP=629;FS=2.026;HRun=0;HaplotypeScore=187.8684;InbreedingCoeff=0.6277;MQ=48.41;MQ0=36;MQRankSum=-0.410;QD=4.85;ReadPosRankSum=1.008;VQSLOD=2.8135;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:9,0:9:19.50:0,20,224	0/0:45,0:2:3.01:0,3,63	0/0:30,0:5:0.47:0,0,1	1/1:22,0:22:8.96:157,9,0	0/0:21,0:19:11.62:0,12,230	0/0:26,0:23:18.06:0,18,431	0/0:32,0:30:89.34:0,89,2016	0/0:29,0:29:56.53:0,57,1158	0/0:31,0:29:75.10:0,75,1632	0/0:11,0:11:17.29:0,17,339	0/1:22,0:22:8.02:12,0,8	0/0:13,0:12:26.58:0,27,518	0/0:20,0:20:42.23:0,42,784	1/1:3,15:17:0.47:1,0,0	1/1:13,0:13:21.07:459,21,0	1/1:7,20:27:12.03:166,12,0	0/0:9,0:9:21.07:0,21,457	0/0:15,0:14:39.09:0,39,830	0/0:30,0:29:51.85:0,52,1056	0/0:25,0:25:7.47:0,7,217	1/1:26,0:26:3.01:56,3,0	0/1:25,0:24:8.06:43,0,8	./.	0/0:19,0:18:34.47:0,34,669	0/0:24,0:24:62.13:0,62,1065	0/0:18,0:18:35.51:0,36,682	0/0:9,0:8:14.39:0,14,186
chr10	40595712	.	TCTCCTC	T	6496.36	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=7.046;DP=588;FS=8.536;HRun=0;HaplotypeScore=197.4181;InbreedingCoeff=0.9948;MQ=60.84;MQ0=7;MQRankSum=-8.457;QD=27.53;ReadPosRankSum=1.630;VQSLOD=3.9381;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,113,1508	1/1:9,0:9:23.67:224,24,0	0/0:20,0:11:27:0,27,423	0/0:16,0:10:26.90:0,27,508	0/0:24,0:24:54.17:0,54,911	1/1:9,8:16:39.08:662,39,0	1/1:18,0:18:41.99:507,42,0	1/1:27,0:24:53.93:578,54,0	1/1:14,4:18:47.91:606,48,0	1/1:18,0:18:41.97:639,42,0	1/1:14,0:14:29.77:323,30,0	0/0:23,0:23:60.17:0,60,1653	0/0:26,0:26:36.05:0,36,533	0/0:34,0:34:72.17:0,72,1090	0/0:36,0:36:75.19:0,75,1141	0/0:17,0:17:27.05:0,27,437	0/0:25,0:25:47.89:0,48,725	1/1:8,0:8:20.94:235,21,0	1/1:14,0:14:33.03:419,33,0	1/1:17,0:17:23.84:235,24,0	1/1:14,0:14:17.79:143,18,0	0/0:26,0:26:45.05:0,45,576	0/0:25,0:25:66.15:0,66,1739	0/0:30,0:30:84.26:0,84,2267	1/1:22,0:22:56.61:619,57,0	1/1:22,0:22:47.84:547,48,0	1/1:12,1:13:39.04:598,39,0	1/1:5,0:5:14.97:162,15,0
chr10	40595716	.	CTCCTCCTCCTCT	C	8548.77	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=6.685;DP=584;FS=7.183;HRun=0;HaplotypeScore=251.1588;InbreedingCoeff=0.9858;MQ=60.62;MQ0=13;MQRankSum=-8.112;QD=37.33;ReadPosRankSum=0.941;VQSLOD=3.4517;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,122,3478	1/1:8,1:9:23.97:327,24,0	0/0:20,0:11:26.96:0,27,625	0/0:16,0:10:27.49:0,27,702	0/0:24,0:24:57.20:0,57,1831	1/1:15,0:14:24.86:603,25,0	1/1:16,0:16:8.46:132,8,0	1/1:8,18:22:54.12:792,54,0	1/1:19,0:18:23.31:411,23,0	1/1:13,4:17:42.14:935,42,0	1/1:12,3:14:30.10:531,30,0	0/0:24,0:24:66.21:0,66,3009	0/0:25,0:25:36.12:0,36,1262	0/0:33,0:33:72.17:0,72,2453	0/0:39,0:39:81.26:0,81,2663	0/0:17,0:17:30.55:0,31,890	0/0:26,0:26:51.05:0,51,1746	1/1:7,1:7:21.07:407,21,0	1/1:4,11:14:33.10:597,33,0	1/1:2,14:16:24.03:424,24,0	1/1:13,0:13:19.08:184,19,0	0/0:23,0:23:54.15:0,54,1507	0/0:27,0:27:75.20:0,75,3183	0/0:31,0:31:87.27:0,87,3889	1/1:17,5:22:57.15:1015,57,0	1/1:3,17:19:48.11:856,48,0	1/1:8,5:13:39.13:1033,39,0	1/1:4,1:5:15.05:301,15,0
chr10	40595734	.	TTCC	T	6266.92	PASS	AB=0.994;AC=35;AF=0.625;AN=56;BaseQRankSum=1.081;DP=563;FS=0.967;HRun=0;HaplotypeScore=167.4725;InbreedingCoeff=0.2953;MQ=51.99;MQ0=23;MQRankSum=-0.126;QD=14.21;ReadPosRankSum=2.500;VQSLOD=4.6452;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:29,18:46:99:1341,99,0	0/1:6,0:6:8.33:8,0,19	0/0:16,0:7:3.01:0,3,47	0/1:12,0:6:4.82:5,0,53	1/1:6,17:23:42:536,42,0	1/1:14,0:13:20.51:124,21,0	0/0:13,0:12:9.10:0,9,63	1/1:27,0:22:2.52:6,3,0	0/1:16,0:15:39.42:49,0,39	1/1:22,0:22:12.54:78,13,0	0/1:14,0:12:3.97:26,0,4	0/0:23,0:22:60.14:0,60,1015	1/1:2,24:26:33.11:486,33,0	1/1:6,29:35:51.15:743,51,0	1/1:3,36:39:63.21:922,63,0	1/1:2,13:15:21:309,21,0	1/1:2,24:26:42.14:618,42,0	1/1:6,0:5:4.50:22,5,0	0/1:15,0:14:15.43:16,0,15	0/1:17,0:16:10.11:10,0,26	0/0:11,0:10:5.16:0,5,24	1/1:4,22:26:62.95:729,63,0	0/0:29,0:28:65.95:0,66,1118	0/0:29,0:29:69.10:0,69,1210	0/1:18,1:18:27.24:80,0,27	0/1:19,0:18:7.56:44,0,8	1/1:13,0:12:10.32:98,10,0	0/1:4,0:4:8.49:15,0,8
chr10	40595749	.	CTCT	C	4488.01	PASS	AB=0.936;AC=38;AF=0.679;AN=56;BaseQRankSum=9.989;DP=579;FS=0.394;HRun=0;HaplotypeScore=187.8942;InbreedingCoeff=0.3067;MQ=49.42;MQ0=21;MQRankSum=-6.238;QD=9.41;ReadPosRankSum=7.172;VQSLOD=3.6603;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:47,0:46:76.34:592,76,0	1/1:7,1:8:11.74:92,12,0	0/0:10,0:4:9.01:0,9,107	0/0:7,0:5:1.86:0,2,68	0/1:19,0:19:27.77:162,0,28	0/1:7,8:15:94.57:185,0,95	0/1:17,0:21:12.11:12,0,194	1/1:20,0:14:25.25:157,25,0	0/1:13,4:19:90.65:91,0,197	1/1:13,4:17:38.14:317,38,0	1/1:11,3:12:8.80:89,9,0	0/0:25,0:24:63.06:0,63,1042	0/1:35,0:35:99:182,0,173	0/1:33,0:33:20.12:253,0,20	0/1:39,0:39:6.31:314,0,6	0/1:15,0:14:2.50:99,0,2	1/1:25,0:25:20.23:234,20,0	1/1:11,1:11:27.17:189,27,0	1/1:15,1:15:20.30:158,20,0	1/1:17,2:18:20.70:147,21,0	1/1:14,0:13:12.81:77,13,0	1/1:24,0:24:48.91:308,49,0	0/0:28,0:27:71.63:0,72,1026	0/0:32,0:32:86.02:0,86,1230	1/1:17,5:21:29.51:259,30,0	1/1:20,3:22:32.10:260,32,0	1/1:8,5:12:25.30:255,25,0	1/1:4,1:5:6.91:57,7,0
chr10	40595757	.	CCTCCTCCTTCTTCTT	C	9455.72	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=2.243;DP=541;FS=0.379;HRun=0;HaplotypeScore=259.1776;InbreedingCoeff=0.9590;MQ=51.96;MQ0=19;MQRankSum=-10.279;QD=46.35;ReadPosRankSum=-2.497;VQSLOD=3.5861;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:45:99:0,134,3179	1/1:5,0:5:15.05:381,15,0	0/0:10,0:4:12.04:0,12,476	0/0:11,0:7:17.87:0,18,463	0/0:23,0:23:60.20:0,60,2355	1/1:10,8:18:47.33:1087,47,0	1/1:18,0:17:8.01:405,8,0	1/1:17,0:12:24.01:470,24,0	1/1:10,4:14:38.33:831,38,0	1/1:17,0:17:47.86:1135,48,0	1/1:9,0:7:9.03:338,9,0	0/0:21,0:20:57.20:0,57,2571	0/0:37,0:37:72.25:0,72,3522	0/0:36,0:36:75.22:0,75,3610	0/0:39,0:39:78.27:0,78,4136	0/0:16,0:15:27.09:0,27,1405	0/0:26,0:26:51.17:0,51,2786	1/1:10,0:9:27.03:582,27,0	1/1:12,0:11:14.90:310,15,0	1/1:17,0:16:24.08:592,24,0	1/1:10,0:9:11.82:251,12,0	0/0:22,0:22:54.19:0,54,1473	0/0:21,0:20:54.19:0,54,2484	0/0:29,0:29:78.24:0,78,3172	1/1:21,0:20:29.35:862,29,0	1/1:23,0:22:45.02:1034,45,0	1/1:10,0:9:27.09:933,27,0	1/1:3,0:3:9.03:244,9,0
chr10	40595759	.	T	TCCT	1743.43	PASS	AB=0.975;AC=22;AF=0.393;AN=56;BaseQRankSum=3.483;DP=531;FS=5.294;HRun=0;HaplotypeScore=179.4081;InbreedingCoeff=0.2265;MQ=52.17;MQ0=18;MQRankSum=-6.130;QD=7.61;ReadPosRankSum=-3.791;VQSLOD=2.1075;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:45:99:0,100,802	1/1:5,0:5:14.93:133,15,0	0/0:10,0:5:6.02:0,6,89	0/1:11,0:8:13.84:14,0,38	0/0:21,0:21:53.98:0,54,571	0/0:20,0:20:40.75:0,41,311	0/0:19,0:18:35.55:0,36,257	1/1:15,0:11:18.03:230,18,0	0/0:14,0:14:38.69:0,39,277	0/1:18,0:18:21.34:264,0,21	1/1:9,0:7:8.35:59,8,0	0/1:20,0:19:35.99:36,0,171	0/0:35,0:35:69.15:0,69,885	0/0:36,0:36:59.99:0,60,807	0/0:37,0:37:72.13:0,72,939	0/0:16,0:15:23.94:0,24,317	0/0:26,0:26:45.11:0,45,599	1/1:10,0:9:7.37:261,7,0	0/1:11,0:10:8.12:82,0,8	1/1:16,0:15:20.17:198,20,0	1/1:11,0:10:12.04:148,12,0	0/0:22,0:22:41.72:0,42,339	0/1:21,0:20:21.83:22,0,216	0/1:28,0:28:69.03:69,0,239	0/1:14,6:20:35.73:95,0,36	0/1:20,0:19:13.05:243,0,13	0/1:10,0:9:40.95:46,0,41	0/1:3,0:3:14.17:35,0,14
chr10	40595760	.	CCTCCTTCTTCTT	C	7756.74	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=5.390;DP=533;FS=0.778;HRun=0;HaplotypeScore=238.8532;InbreedingCoeff=0.9787;MQ=52.36;MQ0=15;MQRankSum=-10.560;QD=38.02;ReadPosRankSum=-2.129;VQSLOD=4.0196;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,119,2180	1/1:4,1:5:15.05:333,15,0	0/0:10,0:5:15.05:0,15,675	0/0:10,0:8:20.98:0,21,677	0/0:21,0:21:58.14:0,58,2164	1/1:20,0:20:53.84:1046,54,0	1/1:19,0:18:28.67:436,29,0	1/1:15,0:11:19.74:336,20,0	1/1:14,0:14:38.83:651,39,0	1/1:14,4:18:42.02:834,42,0	1/1:7,3:8:9.03:258,9,0	0/0:20,0:19:57.17:0,57,2214	0/0:35,0:35:72.25:0,72,3343	0/0:36,0:36:71.66:0,72,3106	0/0:36,0:36:77.63:0,78,3467	0/0:16,0:15:27.08:0,27,1218	0/0:27,0:27:53.49:0,53,2377	1/1:8,1:9:25.51:401,26,0	1/1:10,1:10:13.24:211,13,0	1/1:14,2:15:24.08:474,24,0	1/1:11,0:10:14.53:186,15,0	0/0:22,0:22:54.10:0,54,775	0/0:21,0:20:57.20:0,57,2171	0/0:29,0:29:77.43:0,77,2637	1/1:16,5:20:32.82:706,33,0	1/1:17,3:19:42.08:794,42,0	1/1:4,5:9:27.09:742,27,0	1/1:5,1:6:18.06:348,18,0
chr10	40595763	.	CCTT	C	4049.29	PASS	AB=1.000;AC=32;AF=0.571;AN=56;BaseQRankSum=9.161;DP=533;FS=8.364;HRun=0;HaplotypeScore=173.4849;InbreedingCoeff=0.7191;MQ=52.81;MQ0=12;MQRankSum=-10.066;QD=14.06;ReadPosRankSum=-2.044;VQSLOD=2.2516;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:27,20:47:87.58:1356,88,0	1/1:5,0:5:14.83:104,15,0	0/0:11,0:6:18.03:0,18,248	0/1:12,0:9:4.87:5,0,279	0/0:22,0:22:50.85:0,51,697	0/1:21,0:21:81.47:201,0,81	0/0:19,0:18:18.30:0,18,237	1/1:14,0:11:20.79:143,21,0	0/1:14,0:14:45.92:46,0,175	1/1:5,0:19:36.21:251,36,0	1/1:5,0:8:8.91:61,9,0	0/1:22,0:21:2.05:2,0,411	0/0:35,0:35:74.04:0,74,1079	0/0:34,0:34:66.18:0,66,863	0/0:36,0:36:75.14:0,75,943	0/0:14,0:13:24.07:0,24,321	0/0:27,0:27:54.10:0,54,594	1/1:9,0:9:23.69:163,24,0	1/1:11,0:10:8.91:61,9,0	1/1:17,0:16:23.62:156,24,0	1/1:12,0:11:11.82:78,12,0	1/1:7,13:20:48.14:624,48,0	0/0:20,0:20:21.90:0,22,452	0/0:27,0:27:8.90:0,9,480	1/1:19,0:19:26.95:175,27,0	1/1:19,0:18:38.57:276,39,0	1/1:11,0:10:29.71:209,30,0	1/1:6,0:6:17.92:139,18,0
chr10	40596574	.	TTCTGTCTG	T	6835.12	PASS	AB=1.000;AC=40;AF=0.714;AN=56;BaseQRankSum=7.451;DP=604;FS=5.433;HRun=0;HaplotypeScore=218.6862;InbreedingCoeff=0.5311;MQ=72.08;MQ0=12;MQRankSum=-9.788;QD=15.16;ReadPosRankSum=-2.571;VQSLOD=3.5080;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:15,8:23:12.04:296,12,0	1/1:8,0:8:10.60:220,11,0	0/0:42,0:30:2.90:0,3,16	0/1:31,0:25:0:0,0,0	0/0:29,0:29:54.18:0,54,1976	1/1:16,0:16:8.39:365,8,0	1/1:17,0:17:7.41:124,7,0	0/1:25,0:24:0.02:0,0,0	1/1:20,0:20:21.07:391,21,0	1/1:25,0:25:12.05:534,12,0	1/1:20,0:20:14.02:380,14,0	1/1:7,0:18:21.07:391,21,0	1/1:14,10:24:24.08:592,24,0	1/1:3,11:14:21.07:522,21,0	0/0:19,0:36:50.51:0,51,425	0/0:17,0:24:23.45:0,23,180	0/0:6,0:21:35.92:0,36,293	0/1:18,0:18:0.67:155,0,1	1/1:17,0:17:14.41:231,14,0	0/1:14,0:14:5.88:154,0,6	1/1:17,0:17:5.93:73,6,0	1/1:13,15:28:32.84:820,33,0	1/1:8,0:14:12.51:224,13,0	1/1:14,0:27:6.02:112,6,0	0/1:13,0:13:1.36:208,0,1	1/1:18,0:18:0.89:469,1,0	0/1:27,0:27:2.25:417,0,2	1/1:17,0:16:3.32:156,3,0
chr10	40596588	.	CTG	C	1184.93	PASS	AB=0.790;AC=20;AF=0.357;AN=56;BaseQRankSum=13.969;DP=539;FS=8.895;HRun=0;HaplotypeScore=165.1745;InbreedingCoeff=-0.4088;MQ=54.24;MQ0=16;MQRankSum=-9.510;QD=4.03;ReadPosRankSum=10.527;VQSLOD=0.3310;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:20.19:0,20,465	0/1:2,5:7:48.06:58,0,48	0/0:28,0:13:35.85:0,36,469	0/0:24,0:16:21.60:0,22,509	0/0:35,0:35:99:0,105,1718	0/1:8,6:14:79.69:90,0,80	0/1:12,2:15:20.13:20,0,122	0/0:23,0:20:28.16:0,28,323	0/1:11,7:18:92.54:132,0,93	0/1:11,10:21:99:193,0,140	0/1:9,9:18:44.49:111,0,44	1/1:13,0:13:18.75:79,19,0	0/1:20,0:20:2.51:3,0,343	0/1:13,0:13:25.92:26,0,46	0/0:38,0:37:30.92:0,31,765	0/0:21,0:21:21.58:0,22,473	0/0:26,0:26:5.50:0,5,369	0/1:9,3:12:40.17:40,0,133	0/1:6,4:8:46.61:64,0,47	0/1:8,3:11:34.49:34,0,101	0/1:16,1:17:30.45:30,0,46	0/1:29,0:29:7.83:8,0,476	0/1:11,0:11:25.60:26,0,109	0/0:24,0:24:0.89:0,1,234	0/1:5,4:9:56.23:56,0,64	0/1:10,9:19:79.05:177,0,79	0/1:13,8:21:99:181,0,126	0/1:9,7:15:17.18:17,0,228
chr10	40596592	.	CTGTCTGTCTGTCTG	C	9840.39	PASS	AB=0.798;AC=19;AF=0.339;AN=56;BaseQRankSum=12.673;DP=579;FS=1.663;HRun=0;HaplotypeScore=265.9530;InbreedingCoeff=-0.3457;MQ=50.80;MQ0=16;MQRankSum=-9.504;QD=30.94;ReadPosRankSum=9.457;VQSLOD=2.8068;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:54.13:0,54,854	0/1:2,5:7:22.82:437,0,23	0/0:28,0:12:30.08:0,30,481	0/0:21,0:15:36.92:0,37,503	0/0:36,0:36:99:0,108,5159	0/1:11,6:17:96.13:694,0,96	0/1:24,3:27:99:382,0,120	0/1:26,0:23:24.43:24,0,320	0/1:13,7:20:99:814,0,140	0/1:17,10:27:99:1196,0,142	0/1:9,9:18:10.97:820,0,11	1/1:13,0:13:21.07:645,21,0	0/0:19,0:19:48.14:0,48,794	0/0:12,0:12:24.07:0,24,352	0/0:39,0:38:99:0,105,3074	0/0:20,0:20:57.19:0,57,1632	0/0:27,0:27:72.12:0,72,2175	0/1:11,3:14:92.99:434,0,93	0/1:6,4:8:31.17:464,0,31	0/1:9,3:12:99:373,0,109	0/1:19,1:20:24.75:164,0,25	0/0:30,0:30:78.25:0,78,1255	0/1:10,0:10:47.40:354,0,47	0/1:24,0:24:99:184,0,189	0/1:11,4:15:86.30:411,0,86	0/1:10,9:19:47.93:1039,0,48	0/1:13,8:21:99:842,0,103	0/1:11,7:17:85:563,0,85
chr10	40596824	.	C	CA	3134.29	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=-3.016;DP=670;FS=5.789;HRun=10;HaplotypeScore=80.7610;InbreedingCoeff=0.8740;MQ=70.33;MQ0=0;MQRankSum=0.367;QD=16.67;ReadPosRankSum=-0.122;VQSLOD=3.9109;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,4:41:74.19:406,74,0	0/1:7,0:7:12.09:12,0,105	0/0:15,0:17:5.03:0,5,95	0/0:25,0:23:36.71:0,37,241	1/1:6,20:28:59.82:567,60,0	0/0:19,0:19:50.91:0,51,419	0/0:21,0:21:50.92:0,51,419	0/0:25,0:27:61:0,61,480	0/0:22,0:22:56.93:0,57,468	0/0:31,0:31:71.88:0,72,589	0/0:16,0:16:12.97:0,13,226	0/0:24,0:25:55.88:0,56,444	0/0:16,0:16:41.94:0,42,343	0/0:18,0:18:41.90:0,42,342	1/1:5,28:33:63.16:672,63,0	1/1:1,15:16:42.11:448,42,0	1/1:4,37:41:75.98:1001,76,0	0/0:27,0:27:62.88:0,63,514	0/0:16,0:16:35.94:0,36,295	0/0:21,0:21:25.19:0,25,325	0/0:28,2:31:21.95:0,22,582	1/1:4,0:22:43.25:219,43,0	0/0:25,0:25:53.91:0,54,443	0/0:38,0:38:99:0,105,862	0/0:24,0:24:47.90:0,48,394	0/0:19,1:20:21.92:0,22,381	0/0:23,0:23:59.90:0,60,489	0/0:17,1:19:14.96:0,15,319
chr10	40597439	.	CAAACAA	C	14417.30	PASS	AB=0.586;AC=45;AF=0.804;AN=56;BaseQRankSum=9.559;DP=649;FS=4.854;HRun=0;HaplotypeScore=125.7121;InbreedingCoeff=0.8594;MQ=57.20;MQ0=8;MQRankSum=-8.664;QD=28.44;ReadPosRankSum=2.096;VQSLOD=4.1395;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,18:22:9.03:184,9,0	1/1:2,4:6:12.04:228,12,0	0/0:33,0:19:34.43:0,34,607	0/0:25,0:11:23.97:0,24,329	1/1:10,16:26:39:624,39,0	1/1:8,18:23:24.08:513,24,0	0/1:5,12:17:14.24:295,0,14	1/1:9,15:24:45.14:756,45,0	1/1:8,22:30:42.14:871,42,0	1/1:5,20:25:51.15:961,51,0	1/1:7,14:21:39.13:685,39,0	0/0:27,0:27:66.21:0,66,1969	1/1:6,17:24:33.11:679,33,0	1/1:3,18:21:32.73:687,33,0	1/1:24,0:24:51.15:874,51,0	1/1:5,17:22:30.10:614,30,0	1/1:5,24:29:18.06:366,18,0	1/1:2,12:14:15.05:320,15,0	1/1:6,14:18:42.10:651,42,0	1/1:8,15:23:42.07:753,42,0	1/1:2,12:14:18.06:303,18,0	1/1:1,18:19:48.16:894,48,0	0/0:25,0:25:69.22:0,69,2105	0/0:31,0:31:75.24:0,75,1966	1/1:7,21:28:45.15:962,45,0	1/1:5,15:20:42.14:862,42,0	1/1:12,28:40:51.05:1081,51,0	1/1:1,10:11:12.04:257,12,0
chr10	40597454	.	AC	A	1639.45	PASS	AB=0.985;AC=24;AF=0.429;AN=56;BaseQRankSum=14.500;DP=597;FS=0.732;HRun=1;HaplotypeScore=115.5062;InbreedingCoeff=-0.5943;MQ=60.95;MQ0=8;MQRankSum=-14.261;QD=3.65;ReadPosRankSum=9.920;VQSLOD=-0.7250;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:19:7.73:31,8,0	0/1:5,0:5:22.70:23,0,42	0/0:32,0:18:44.42:0,44,482	0/0:26,0:13:23.95:0,24,246	0/1:16,0:16:83.24:87,0,83	0/1:27,0:24:53.79:54,0,149	0/1:16,0:16:40.81:41,0,74	0/1:16,0:16:47.10:47,0,55	0/1:29,0:29:94.80:95,0,137	0/1:21,0:21:8.32:130,0,8	0/1:15,0:15:53.59:54,0,66	0/0:27,0:27:78.19:0,78,987	0/1:21,0:21:16.81:84,0,17	0/1:20,0:20:29.39:81,0,29	0/1:11,11:22:60.92:247,0,61	0/1:19,0:19:46.11:75,0,46	0/1:30,0:30:31.85:32,0,85	0/1:14,0:14:20.17:42,0,20	0/1:21,0:19:46.61:47,0,129	0/1:17,0:17:82.12:82,0,141	0/1:14,0:14:22.66:23,0,51	0/1:21,0:21:87.12:87,0,143	0/0:29,0:29:87.24:0,87,1108	0/0:34,0:34:99:0,102,1237	0/1:23,0:23:31.80:140,0,32	0/1:21,0:21:99:117,0,106	0/1:30,0:30:27:153,0,27	0/1:11,0:11:10.16:31,0,10
chr10	40597458	.	AAAAAC	A	555.92	PASS	AB=1.000;AC=14;AF=0.250;AN=56;BaseQRankSum=15.513;DP=612;FS=42.481;HRun=0;HaplotypeScore=157.8612;InbreedingCoeff=-0.1740;MQ=62.59;MQ0=7;MQRankSum=-14.749;QD=1.99;ReadPosRankSum=10.877;VQSLOD=0.6602;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:20:0.16:0,0,34	0/0:5,0:5:0.59:0,1,75	0/0:35,0:21:53.23:0,53,1226	0/0:22,0:10:26.92:0,27,659	0/0:17,0:17:5.28:0,5,206	0/1:27,0:24:3.27:3,0,369	0/0:18,0:18:6.22:0,6,282	0/0:17,0:17:30.94:0,31,288	0/1:29,0:29:12.02:12,0,435	0/1:21,0:21:3.90:4,0,104	0/1:16,0:16:13.47:13,0,187	0/0:28,0:28:84.28:0,84,2285	0/1:21,0:21:22.50:22,0,111	0/1:20,0:20:14.64:15,0,115	1/1:12,11:23:24.72:531,25,0	0/1:19,0:19:14.87:15,0,133	0/0:31,0:31:13.96:0,14,397	0/0:14,0:14:3.54:0,4,126	0/0:22,0:21:35.61:0,36,522	0/1:17,0:17:5.97:6,0,273	0/0:16,0:16:7.45:0,7,170	0/1:21,0:21:14.18:14,0,309	0/0:30,0:30:90.31:0,90,2747	0/0:33,0:33:99:0,99,2789	0/1:23,0:23:33.85:34,0,106	0/0:24,0:24:11.04:0,11,491	0/1:31,0:31:25.92:26,0,151	0/1:11,0:11:6.66:7,0,56
chr10	40598223	.	TGAGA	T	3129.49	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.828;DP=704;FS=2.310;HRun=0;HaplotypeScore=117.8633;InbreedingCoeff=0.9984;MQ=83.96;MQ0=1;MQRankSum=-5.309;QD=39.12;ReadPosRankSum=0.517;VQSLOD=4.1062;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,123,3036	0/0:8,0:8:21.07:0,21,549	0/0:28,0:28:78.27:0,78,1885	0/0:27,0:27:78.22:0,78,1930	0/0:18,0:18:48.16:0,48,1224	1/1:1,21:21:54.19:982,54,0	1/1:3,30:33:72.25:1309,72,0	0/0:36,0:35:99:0,99,2507	1/1:2,23:25:54.19:982,54,0	0/0:29,0:29:78.27:0,78,2034	0/0:13,0:13:33.11:0,33,862	0/0:22,0:22:57.18:0,57,1434	0/0:31,0:31:87.30:0,87,2215	0/0:18,0:19:56.98:0,57,1397	0/0:24,0:24:72.25:0,72,1845	0/0:26,0:26:75.24:0,75,1849	0/0:30,0:30:87.30:0,87,2272	0/0:22,0:22:63.22:0,63,1597	0/0:26,0:26:69.24:0,69,1724	0/0:17,0:17:51.16:0,51,1277	0/0:36,0:36:96.31:0,96,2309	0/0:16,0:16:45.15:0,45,1154	0/0:22,0:22:55.99:0,56,1489	0/0:36,0:36:99:0,102,2627	0/0:33,0:33:93.29:0,93,2307	0/0:22,0:22:60.17:0,60,1443	0/0:23,0:23:66.23:0,66,1708	0/0:16,0:16:48.16:0,48,1257
chr10	40598350	.	AAGGTC	A	15682.64	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=17.041;DP=715;FS=8.309;HRun=0;HaplotypeScore=154.6677;InbreedingCoeff=0.9996;MQ=83.98;MQ0=1;MQRankSum=-14.955;QD=54.45;ReadPosRankSum=-0.625;VQSLOD=5.0961;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,111,3301	1/1:0,14:14:36.12:781,36,0	0/0:29,0:29:81.28:0,81,2500	0/0:25,0:27:68.95:0,69,1886	0/0:25,0:25:72.25:0,72,2139	0/0:26,0:26:75.24:0,75,2277	0/0:27,0:27:78.27:0,78,2377	1/1:2,27:29:84.25:1704,84,0	0/0:26,0:26:78.27:0,78,2416	1/1:0,29:29:87.27:1824,87,0	1/1:0,24:24:63.22:1362,63,0	0/0:23,0:23:69.24:0,69,2134	0/0:24,0:24:72.25:0,72,2194	0/0:23,0:23:69.23:0,69,2100	0/0:23,0:23:69.21:0,69,2063	0/0:31,0:31:93.32:0,93,2892	0/0:27,0:27:81.28:0,81,2526	1/1:0,15:15:36.12:781,36,0	1/1:1,20:21:60.16:1194,60,0	1/1:3,34:37:78.23:1640,78,0	1/1:4,19:22:33.11:711,33,0	0/0:26,0:26:78.27:0,78,2466	0/0:25,0:25:75.24:0,75,2250	0/0:24,0:24:72.25:0,72,2284	1/1:0,27:27:72.25:1554,72,0	1/1:0,35:35:99:2264,105,0	1/1:0,25:25:63.22:1347,63,0	1/1:0,9:9:24.08:521,24,0
chr10	40598764	.	GCA	G	2480.27	PASS	AB=0.919;AC=7;AF=0.125;AN=56;BaseQRankSum=12.159;DP=989;FS=4.405;HRun=0;HaplotypeScore=161.1667;InbreedingCoeff=0.7259;MQ=56.16;MQ0=14;MQRankSum=1.257;QD=17.11;ReadPosRankSum=2.209;VQSLOD=3.7959;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:62,1:63:99:0,119,2439	0/0:18,0:18:48.16:0,48,787	0/0:53,1:5:4.56:0,5,44	0/0:42,0:11:9:0,9,136	0/0:27,2:29:0.85:0,1,1027	0/0:16,0:16:27.08:0,27,442	0/0:41,1:42:54.04:0,54,1373	0/0:31,1:32:44.04:0,44,1158	0/0:42,1:43:78.24:0,78,1218	0/0:32,2:34:15.93:0,16,1298	0/0:15,0:15:27.09:0,27,443	1/1:6,43:49:90.28:1116,90,0	0/0:39,0:39:83.57:0,84,1465	0/0:46,1:47:71.11:0,71,1645	0/0:41,0:41:72.22:0,72,1169	0/0:25,0:25:57.19:0,57,931	0/0:36,1:37:59.12:0,59,1468	0/0:18,0:18:45.15:0,45,738	0/0:16,0:16:39.13:0,39,632	0/0:20,0:20:48.05:0,48,778	0/0:119,4:123:99:0,223,5137	0/0:27,1:28:38.05:0,38,1138	1/1:4,26:30:72.22:893,72,0	1/1:7,25:32:47.93:595,48,0	0/0:32,1:33:32.03:0,32,1041	0/1:31,3:34:24.33:24,0,1190	0/0:19,0:19:39.13:0,39,626	0/0:10,0:10:27.09:0,27,443
chr10	40598898	.	GCACACACACA	G	8709.67	PASS	AC=28;AF=0.519;AN=54;BaseQRankSum=2.519;DP=696;FS=32.340;HRun=0;HaplotypeScore=254.4777;InbreedingCoeff=0.9134;MQ=48.98;MQ0=5;MQRankSum=-6.725;QD=22.28;ReadPosRankSum=3.938;VQSLOD=2.9165;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:14,16:30:15.05:411,15,0	0/0:3,0:6:14.98:0,15,519	0/0:19,0:10:6.02:0,6,197	./.	1/1:11,15:26:12.04:290,12,0	1/1:4,0:20:30.10:660,30,0	1/1:20,0:27:11.77:279,12,0	0/0:26,0:26:27.09:0,27,873	1/1:12,0:36:57.20:1315,57,0	0/0:33,0:34:81.28:0,81,2726	0/0:20,0:21:36.06:0,36,1143	1/1:12,17:29:39.04:1113,39,0	1/1:10,0:29:36.12:810,36,0	1/1:10,0:27:33.11:768,33,0	1/1:15,17:34:38.66:1135,39,0	1/1:13,9:24:18.06:522,18,0	1/1:12,11:25:18.06:502,18,0	0/0:17,0:22:33.09:0,33,1231	0/0:11,0:11:30.10:0,30,1096	0/0:13,0:19:30.32:0,30,784	0/0:46,0:46:18.78:0,19,706	1/1:14,11:27:6.02:181,6,0	1/1:4,10:14:5.95:181,6,0	1/1:28,13:43:18.06:543,18,0	0/0:7,0:14:8.79:0,9,280	0/0:30,0:32:75.25:0,75,2533	0/0:15,0:19:36.12:0,36,1274	0/0:4,0:7:6.02:0,6,244
chr10	40598984	.	C	CAGG	14963.65	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=7.525;DP=660;FS=8.984;HRun=0;HaplotypeScore=122.7611;InbreedingCoeff=0.9988;MQ=87.88;MQ0=0;MQRankSum=-5.508;QD=58.45;ReadPosRankSum=-1.344;VQSLOD=5.5094;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:78.21:0,78,1224	1/1:0,11:11:33.03:708,33,0	0/0:23,0:23:63.11:0,63,968	0/0:30,0:30:75.22:0,75,1204	0/0:27,0:27:72.25:0,72,1227	0/0:17,0:17:45.15:0,45,749	0/0:25,0:25:75.24:0,75,1252	1/1:5,17:24:66.18:1326,66,0	0/0:27,0:27:72.15:0,72,1101	1/1:2,22:24:69.23:1510,69,0	1/1:0,13:13:39.13:897,39,0	0/0:31,0:31:78.27:0,78,1326	0/0:26,0:26:60.21:0,60,1011	0/0:28,0:28:75.26:0,75,1275	0/0:24,0:24:57.18:0,57,946	0/0:23,0:23:63.22:0,63,1069	0/0:28,0:28:72.25:0,72,1222	1/1:2,24:26:69.24:1590,69,0	1/1:8,11:22:54.12:1086,54,0	1/1:2,20:23:60.09:1236,60,0	1/1:0,18:20:48.10:1055,48,0	0/0:24,0:24:69.22:0,69,1149	0/0:13,0:13:30.03:0,30,475	0/0:30,0:30:69.24:0,69,1157	1/1:1,26:27:78.27:1732,78,0	1/1:2,34:36:99:2307,105,0	1/1:0,22:24:48.16:1104,48,0	1/1:0,6:6:18.06:415,18,0
chr10	40599800	.	GGA	G	1655.60	PASS	AB=1.000;AC=25;AF=0.463;AN=54;BaseQRankSum=-2.934;DP=396;FS=6.366;HRun=0;HaplotypeScore=65.4169;InbreedingCoeff=0.7873;MQ=79.35;MQ0=1;MQRankSum=-1.179;QD=12.26;ReadPosRankSum=-7.145;VQSLOD=0.9181;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:12.41:0,12,506	1/1:1,3:4:3.01:46,3,0	0/0:24,0:24:12.20:0,12,453	0/0:8,0:7:7.50:0,8,100	0/0:5,0:5:12.02:0,12,136	0/0:15,0:15:40.03:0,40,213	0/0:26,0:26:25.84:0,26,270	1/1:18,3:21:33.03:335,33,0	0/0:25,0:25:65.82:0,66,359	1/1:13,0:13:5.34:135,5,0	./.	0/0:25,0:25:65.49:0,65,348	0/1:9,0:9:7.91:104,0,8	1/1:11,1:11:5.53:33,6,0	0/0:18,0:18:47.89:0,48,618	0/0:19,0:19:40.61:0,41,488	0/0:19,0:19:54.15:0,54,538	1/1:4,0:4:2.74:12,3,0	1/1:6,3:9:18.04:215,18,0	1/1:7,1:8:15:148,15,0	1/1:12,5:17:33.49:356,33,0	0/0:10,0:10:27.06:0,27,376	0/0:14,0:14:36.94:0,37,187	0/0:24,0:24:63.28:0,63,369	1/1:15,0:15:29.36:199,29,0	1/1:11,0:11:14.48:92,14,0	1/1:0,11:11:8.88:137,9,0	1/1:1,0:1:3.01:45,3,0
chr10	40599802	.	AG	A	2544.03	PASS	AB=0.977;AC=30;AF=0.536;AN=56;BaseQRankSum=1.765;DP=414;FS=4.735;HRun=10;HaplotypeScore=61.2868;InbreedingCoeff=0.4464;MQ=77.60;MQ0=1;MQRankSum=-1.653;QD=9.28;ReadPosRankSum=6.864;VQSLOD=1.7898;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,1:23:10.55:0,11,375	1/1:4,0:4:1.55:4,2,0	0/0:23,0:23:11.24:0,11,295	0/0:8,0:7:9.02:0,9,93	0/0:1,0:5:11.56:0,12,76	1/1:2,14:16:35.99:313,36,0	1/1:3,20:25:58.01:480,58,0	0/1:24,0:24:3.77:4,0,52	1/1:4,22:26:56.98:495,57,0	0/0:14,0:14:7.08:0,7,40	0/0:9,0:9:2.99:0,3,23	1/1:3,23:26:59.97:521,60,0	0/0:9,0:9:2.08:0,2,36	1/1:11,0:10:0.95:2,1,0	0/0:19,0:19:42.86:0,43,419	0/0:19,1:20:13.97:0,14,352	0/1:16,3:19:37.84:38,0,266	1/1:4,0:4:2.88:15,3,0	0/1:11,0:11:3.88:4,0,39	0/1:9,0:9:2.17:2,0,20	0/1:19,0:19:1.65:2,0,39	0/0:10,0:10:18.05:0,18,199	1/1:1,13:14:35.99:312,36,0	1/1:5,19:24:50.97:443,51,0	0/1:17,0:17:13.88:45,0,14	1/1:12,0:12:3.67:26,4,0	1/1:12,0:12:4.66:12,5,0	1/1:1,0:1:1.25:3,1,0
chr10	40601363	.	TTTTTTTG	T	1769.99	PASS	AB=0.944;AC=19;AF=0.339;AN=56;BaseQRankSum=-2.239;DP=374;FS=4.639;HRun=0;HaplotypeScore=99.3203;InbreedingCoeff=0.4884;MQ=67.22;MQ0=2;MQRankSum=-4.311;QD=10.60;ReadPosRankSum=3.301;VQSLOD=1.7011;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:7,18:25:11.48:258,11,0	0/0:2,0:2:5.95:0,6,53	0/0:22,0:13:18.93:0,19,172	0/0:23,0:15:30.49:0,30,580	1/1:5,7:12:18.60:120,19,0	0/0:15,0:14:6.40:0,6,410	0/0:5,0:5:11.99:0,12,242	0/1:17,0:15:60.06:60,0,308	0/0:5,0:5:10.26:0,10,137	0/0:17,0:16:32.90:0,33,412	0/1:11,0:11:2.01:2,0,159	0/1:10,0:10:2.63:3,0,307	1/1:2,12:13:8.99:159,9,0	1/1:0,9:9:11.87:223,12,0	1/1:0,13:13:11.83:277,12,0	1/1:3,5:8:17.89:362,18,0	0/1:9,17:24:33:474,0,33	0/0:20,0:19:41.86:0,42,477	0/1:11,0:10:5.76:6,0,268	0/0:9,0:9:26.43:0,26,402	0/1:9,0:8:4.26:4,0,93	0/1:2,0:2:0:0,0,0	0/0:2,0:2:6.02:0,6,104	0/0:5,0:5:9.03:0,9,185	0/0:20,0:20:33.71:0,34,473	0/0:21,0:19:33.44:0,33,656	0/0:20,0:20:42.88:0,43,730	0/0:21,0:16:48.16:0,48,937
chr10	40601368	.	TTG	T	3928.82	PASS	AB=1.000;AC=49;AF=0.907;AN=54;BaseQRankSum=-3.920;DP=364;FS=54.491;HRun=0;HaplotypeScore=64.4191;InbreedingCoeff=-0.0663;MQ=63.27;MQ0=3;MQRankSum=-0.372;QD=10.85;ReadPosRankSum=-3.369;VQSLOD=0.8887;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:22:17.94:154,18,0	1/1:1,1:2:6.02:81,6,0	0/1:23,0:12:11.54:12,0,76	0/1:22,0:14:19.98:20,0,80	1/1:11,0:11:23.40:146,23,0	1/1:14,0:13:9.12:104,9,0	0/1:6,0:6:1.87:29,0,2	1/1:16,1:15:29.49:220,29,0	1/1:5,0:5:14.79:100,15,0	1/1:0,16:15:35.43:285,35,0	1/1:11,1:12:27.78:242,28,0	1/1:8,0:8:18.83:107,19,0	1/1:13,0:12:8.97:76,9,0	1/1:9,0:9:11.95:102,12,0	1/1:13,0:13:11.81:110,12,0	1/1:11,0:11:29.95:259,30,0	0/1:23,0:21:4.26:192,0,4	1/1:19,1:19:47.88:404,48,0	1/1:12,0:11:21.02:158,21,0	1/1:9,1:10:18.16:134,18,0	1/1:7,0:6:12.49:69,12,0	./.	1/1:2,0:2:3.89:28,4,0	1/1:5,0:5:3.48:12,3,0	1/1:20,0:20:46.98:428,47,0	1/1:19,1:18:13.93:188,14,0	0/1:16,0:16:3.80:124,0,4	1/1:22,0:17:21.62:143,22,0
chr10	40601369	.	TG	T	4701.15	PASS	AB=1.000;AC=52;AF=0.963;AN=54;BaseQRankSum=-2.251;DP=363;FS=25.157;HRun=1;HaplotypeScore=57.3444;InbreedingCoeff=-0.0543;MQ=63.26;MQ0=4;MQRankSum=-2.623;QD=13.02;ReadPosRankSum=-0.058;VQSLOD=2.0622;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:21,1:22:17.90:136,18,0	1/1:1,1:2:6.01:58,6,0	0/1:23,0:12:18.63:19,0,81	0/1:24,0:14:38.18:41,0,38	1/1:11,0:11:26.04:167,26,0	1/1:14,0:13:28.76:189,29,0	1/1:5,0:5:11.38:71,11,0	1/1:17,0:15:34.08:259,34,0	1/1:4,1:5:14.90:123,15,0	1/1:16,0:15:35.93:303,36,0	1/1:11,1:12:29.88:243,30,0	1/1:7,1:8:23.27:158,23,0	1/1:12,1:12:8.92:63,9,0	1/1:9,0:9:11.87:82,12,0	1/1:13,0:13:11.68:84,12,0	1/1:11,0:11:29.83:226,30,0	1/1:22,0:21:4.51:146,5,0	1/1:17,1:17:47.86:388,48,0	1/1:12,0:11:28.24:207,28,0	1/1:9,1:10:28.67:194,29,0	1/1:6,1:6:14.86:106,15,0	./.	1/1:2,0:2:5.75:39,6,0	1/1:4,1:5:8.16:44,8,0	1/1:20,0:20:52.98:427,53,0	1/1:21,0:19:44.28:345,44,0	1/1:16,0:16:37.54:276,38,0	1/1:20,2:17:45.08:308,45,0
chr10	40602702	.	CTACA	C	797.57	PASS	AB=1.000;AC=6;AF=0.107;AN=56;BaseQRankSum=8.389;DP=521;FS=10.045;HRun=0;HaplotypeScore=100.1069;InbreedingCoeff=0.6018;MQ=66.26;MQ0=18;MQRankSum=-3.411;QD=11.90;ReadPosRankSum=-0.277;VQSLOD=2.3085;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:68.84:0,69,618	0/1:13,0:13:9.09:9,0,105	0/0:27,0:14:25.27:0,25,299	0/0:28,0:13:21.77:0,22,219	0/0:12,0:12:23.96:0,24,197	0/0:19,0:19:27.01:0,27,361	0/0:16,0:16:45.83:0,46,596	0/0:22,0:21:61.26:0,61,547	0/0:12,0:12:21.50:0,21,332	0/0:25,0:23:50.29:0,50,527	0/0:16,0:16:21.51:0,22,239	1/1:1,13:14:12.04:213,12,0	0/1:13,0:12:18.97:19,0,149	0/0:9,0:9:20.98:0,21,176	0/0:14,0:13:32.99:0,33,516	0/0:14,0:14:18.91:0,19,279	0/0:19,0:20:39.45:0,39,663	0/0:11,0:10:29.79:0,30,220	0/0:13,0:13:35.76:0,36,311	0/0:23,0:23:13.33:0,13,258	0/0:24,0:23:47.97:0,48,409	0/0:25,0:24:65.83:0,66,957	0/0:1,16:17:0:0,0,1	1/1:2,24:25:34.67:686,35,0	0/0:25,0:24:46.46:0,46,453	0/0:22,0:22:54.96:0,55,517	0/0:20,0:19:16.73:0,17,329	0/0:11,0:11:32.94:0,33,270
chr10	40602703	.	TACACACACAC	T	975.57	PASS	AB=0.840;AC=17;AF=0.340;AN=50;BaseQRankSum=3.342;DP=538;FS=2.299;HRun=0;HaplotypeScore=147.6210;InbreedingCoeff=0.6332;MQ=64.31;MQ0=20;MQRankSum=-4.737;QD=5.84;ReadPosRankSum=-1.216;VQSLOD=2.7198;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:20.59:0,21,478	1/1:6,7:13:11.43:353,11,0	./.	./.	./.	0/0:9,0:19:9.03:0,9,428	0/0:16,0:16:24.08:0,24,962	0/0:21,0:19:6.02:0,6,115	0/0:13,0:16:18.53:0,19,726	1/1:20,4:22:7.03:200,7,0	1/1:11,5:16:3.01:89,3,0	0/0:15,0:15:5.87:0,6,164	0/0:12,0:13:12.93:0,13,262	0/0:10,0:10:9.03:0,9,204	0/0:16,0:14:21.07:0,21,870	0/0:5,0:14:11.06:0,11,396	0/0:23,0:23:31.35:0,31,1215	1/1:10,0:9:3.01:39,3,0	1/1:14,0:14:0.07:13,0,0	1/1:14,1:23:9.01:148,9,0	0/0:24,0:23:12.01:0,12,133	0/0:27,0:26:36.12:0,36,1498	0/0:17,0:17:0:0,0,0	0/0:29,0:26:36.12:0,36,742	1/1:19,6:24:3.01:89,3,0	0/1:17,4:21:3.09:83,0,3	1/1:16,0:20:6.49:120,6,0	0/0:10,0:10:3.90:0,4,42
chr10	40603236	.	T	TA	11929.31	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=9.082;DP=711;FS=0.581;HRun=1;HaplotypeScore=95.8574;InbreedingCoeff=0.9997;MQ=92.62;MQ0=0;MQRankSum=-8.100;QD=40.58;ReadPosRankSum=5.135;VQSLOD=4.7865;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,35:35:99:1528,102,0	0/0:9,0:9:27.09:0,27,350	0/0:30,0:30:72.22:0,72,985	0/0:29,0:29:87.10:0,87,1042	1/1:0,24:24:72.24:1070,72,0	0/0:25,0:25:72.23:0,72,935	0/0:33,0:33:90.29:0,90,1168	0/0:35,0:35:96.30:0,96,1234	0/0:23,0:23:69.21:0,69,881	0/0:19,0:19:57.19:0,57,740	0/0:12,0:12:36.12:0,36,466	1/1:0,23:23:63.21:944,63,0	1/1:1,31:32:81.27:1214,81,0	1/1:1,18:19:48.16:720,48,0	1/1:0,34:34:99:1484,99,0	1/1:1,36:37:93.32:1394,93,0	1/1:3,29:32:78.26:1169,78,0	0/0:29,0:29:81.25:0,81,1036	0/0:22,0:22:66.21:0,66,857	0/0:10,0:10:30.08:0,30,375	0/0:51,0:51:99:0,147,1905	1/1:1,24:25:69.23:1023,69,0	1/1:0,14:15:45.15:663,45,0	1/1:1,17:18:48.16:720,48,0	0/0:18,0:18:51.14:0,51,658	0/0:28,0:28:81.26:0,81,1051	0/0:32,0:32:96.31:0,96,1244	0/0:12,0:12:36.12:0,36,463
chr10	40603731	.	C	CA	13471.93	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=6.323;DP=709;FS=3.239;HRun=0;HaplotypeScore=85.7251;InbreedingCoeff=0.9995;MQ=80.70;MQ0=1;MQRankSum=-0.756;QD=40.46;ReadPosRankSum=6.485;VQSLOD=4.9732;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,58:61:99:2664,169,0	0/0:10,0:10:27.05:0,27,354	0/0:21,0:22:43.90:0,44,545	0/0:15,0:15:41.82:0,42,485	1/1:2,22:24:50.97:724,51,0	0/0:29,0:29:87.18:0,87,1147	0/0:24,0:24:69.20:0,69,925	0/0:24,0:24:68.98:0,69,818	0/0:27,0:27:78.25:0,78,1063	0/0:24,0:24:69.18:0,69,935	0/0:18,0:18:49:0,49,648	1/1:0,34:34:93.32:1483,93,0	1/1:1,22:23:57.19:909,57,0	1/1:0,26:26:66.23:1052,66,0	1/1:1,33:34:90.31:1436,90,0	1/1:0,26:26:72.25:1149,72,0	1/1:0,25:25:60.20:957,60,0	0/0:18,0:17:48.12:0,48,633	0/0:16,0:16:42.08:0,42,531	0/0:17,0:17:51:0,51,679	0/0:43,0:43:99:0,126,1597	1/1:0,38:38:93.32:1471,93,0	1/1:0,20:20:44.91:717,45,0	1/1:1,21:22:57.19:909,57,0	0/0:18,0:18:53.96:0,54,685	0/0:43,0:43:99:0,123,1665	0/0:20,0:20:60.09:0,60,784	0/0:8,0:8:23.97:0,24,307
chr10	40604135	.	CTGTGTGTGTGTGTGTG	C	1892.74	PASS	AB=0.765;AC=9;AF=0.173;AN=52;BaseQRankSum=5.801;DP=632;FS=11.729;HRun=0;HaplotypeScore=233.5119;InbreedingCoeff=0.4922;MQ=65.88;MQ0=12;MQRankSum=-5.123;QD=11.61;ReadPosRankSum=-1.934;VQSLOD=1.0904;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:34:53.58:54,0,107	0/0:7,0:8:12.04:0,12,452	./.	./.	1/1:15,11:24:3.01:131,3,0	0/0:13,0:13:12.51:0,13,305	0/0:31,0:31:39.09:0,39,970	0/0:26,0:25:24.81:0,25,532	0/0:15,0:15:12.04:0,12,367	0/0:19,0:18:18.95:0,19,589	0/0:9,0:9:9:0,9,148	0/0:22,0:23:33.11:0,33,1001	0/0:14,0:13:17.65:0,18,352	0/0:21,0:31:30.01:0,30,421	1/1:17,19:35:13.99:780,14,0	1/1:13,13:25:14.62:780,15,0	0/1:13,5:18:8.84:119,0,9	0/0:17,0:17:9.03:0,9,458	0/0:22,0:22:20.54:0,21,546	0/0:12,0:14:18.06:0,18,746	0/0:49,0:46:36.55:0,37,1639	0/1:14,0:21:67.87:172,0,68	0/0:12,0:12:18.06:0,18,570	0/0:25,0:31:29.70:0,30,1020	0/0:17,0:19:24.04:0,24,607	0/0:21,0:26:45.11:0,45,1486	0/0:11,0:19:24.45:0,24,892	0/0:7,0:7:9.01:0,9,177
chr10	40606657	.	T	TA	7151.61	PASS	AB=0.771;AC=24;AF=0.429;AN=56;BaseQRankSum=-15.653;DP=565;FS=11.886;HRun=8;HaplotypeScore=55.7159;InbreedingCoeff=0.8977;MQ=71.64;MQ0=0;MQRankSum=1.567;QD=27.19;ReadPosRankSum=-1.018;VQSLOD=4.3826;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:71.96:0,72,649	1/1:0,8:8:24.07:277,24,0	0/0:10,0:10:11.01:0,11,101	0/1:8,0:7:5.91:6,0,18	0/0:31,0:31:90.05:0,90,823	0/0:19,0:19:50.94:0,51,452	0/0:21,0:21:50.99:0,51,456	0/1:3,16:19:0.77:489,0,1	0/0:15,0:15:39.01:0,39,353	1/1:2,22:24:63.18:718,63,0	1/1:1,18:19:45.05:502,45,0	0/0:20,0:20:50.91:0,51,447	0/0:18,0:18:44.94:0,45,396	0/0:23,0:23:63.02:0,63,572	0/0:21,0:21:53.99:0,54,482	0/0:15,0:15:39.02:0,39,357	0/0:31,0:31:78.04:0,78,714	1/1:1,33:34:90.27:1039,90,0	1/1:1,13:14:39.08:424,39,0	1/1:2,25:27:63.03:679,63,0	1/1:2,14:16:33.10:381,33,0	0/0:19,0:19:54.03:0,54,494	0/0:20,0:20:51.03:0,51,467	0/0:15,0:15:38.19:0,38,328	1/1:1,27:28:78.23:900,78,0	1/1:4,17:21:48.13:544,48,0	1/1:3,26:29:66.10:744,66,0	1/1:1,15:16:39.12:450,39,0
chr10	40611828	.	A	ATGTGTG	4553.29	PASS	AB=0.984;AC=46;AF=0.920;AN=50;BaseQRankSum=-1.735;DP=883;FS=7.627;HRun=0;HaplotypeScore=273.1701;InbreedingCoeff=0.0604;MQ=55.83;MQ0=14;MQRankSum=-0.337;QD=5.91;ReadPosRankSum=0.003;VQSLOD=2.5075;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:39,0:39:38.28:269,38,0	1/1:11,0:12:0.92:22,1,0	./.	./.	./.	1/1:20,0:19:12.02:155,12,0	1/1:27,0:25:8.65:45,9,0	1/1:48,0:43:20.46:109,20,0	0/1:30,0:29:27.55:163,0,28	1/1:31,0:30:33.18:438,33,0	1/1:24,0:25:11.93:104,12,0	1/1:38,0:37:19.38:138,19,0	1/1:27,1:28:40.47:429,40,0	1/1:13,13:28:3.01:97,3,0	1/1:35,0:35:29.32:336,29,0	1/1:39,0:39:31.16:498,31,0	1/1:38,0:36:33.29:379,33,0	0/1:31,0:32:20.65:53,0,21	1/1:26,0:24:6.49:81,6,0	1/1:26,0:29:2.94:25,3,0	1/1:84,0:82:16.18:114,16,0	1/1:34,0:35:38.27:368,38,0	0/0:22,0:22:0.47:0,0,2	1/1:34,0:35:33.21:244,33,0	1/1:20,0:20:5.97:50,6,0	1/1:33,0:33:17.96:193,18,0	1/1:23,0:25:27.53:203,28,0	1/1:8,0:8:6.38:41,6,0
chr10	40611830	.	G	GTGTGTGTGTA	12168.17	PASS	AB=0.883;AC=46;AF=0.852;AN=54;BaseQRankSum=-0.043;DP=874;FS=11.154;HRun=0;HaplotypeScore=293.7119;InbreedingCoeff=0.4585;MQ=52.48;MQ0=15;MQRankSum=0.641;QD=15.38;ReadPosRankSum=3.512;VQSLOD=2.0082;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:35,0:35:44.48:508,44,0	1/1:11,0:12:15:161,15,0	0/0:28,0:17:20.49:0,20,176	0/0:29,0:17:33:0,33,319	./.	1/1:20,0:19:30.63:326,31,0	1/1:27,0:25:23.86:243,24,0	1/1:44,0:39:71.55:616,72,0	0/1:31,0:29:27.40:223,0,27	1/1:30,3:31:77.82:1475,78,0	1/1:22,1:25:38.97:518,39,0	1/1:36,1:36:45.87:659,46,0	0/1:27,0:27:30.20:30,0,151	0/1:30,0:30:23.23:23,0,86	1/1:35,1:36:7.28:537,7,0	1/1:39,0:39:50.24:817,50,0	1/1:38,0:36:61.64:794,62,0	1/1:30,0:30:51.75:621,52,0	1/1:25,0:24:27.89:411,28,0	1/1:24,3:28:15.40:125,15,0	1/1:85,0:83:40.12:759,40,0	1/1:35,0:35:56.97:744,57,0	0/1:3,20:26:0.26:0,0,0	1/1:35,0:35:62.39:832,62,0	1/1:22,1:21:26.97:275,27,0	1/1:35,0:34:78.89:812,79,0	1/1:25,0:25:47.08:622,47,0	1/1:7,0:7:3.41:37,3,0
chr10	40611832	.	G	GTGTGTGTA	11639.51	PASS	AB=0.987;AC=45;AF=0.833;AN=54;BaseQRankSum=-0.854;DP=880;FS=24.283;HRun=0;HaplotypeScore=275.2922;InbreedingCoeff=0.5283;MQ=50.25;MQ0=16;MQRankSum=0.453;QD=15.12;ReadPosRankSum=5.983;VQSLOD=1.6848;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:34,1:35:50.35:704,50,0	1/1:13,0:13:14.84:149,15,0	0/0:25,0:14:20.87:0,21,181	0/0:29,0:17:33.01:0,33,320	./.	1/1:20,0:19:32.68:351,33,0	1/1:29,0:27:23.86:224,24,0	1/1:46,0:41:33.82:550,34,0	1/1:32,0:30:11.68:347,12,0	1/1:32,0:31:64.53:952,65,0	1/1:25,0:25:37.50:412,37,0	1/1:35,0:34:34.38:404,34,0	0/1:27,0:27:53.45:53,0,155	0/1:29,0:29:28.87:29,0,125	1/1:32,3:39:47.23:840,47,0	1/1:31,5:38:50.71:1032,51,0	1/1:33,3:37:55.06:1103,55,0	1/1:30,0:30:47.06:482,47,0	0/1:24,0:23:0.24:346,0,0	1/1:28,0:28:17.73:139,18,0	1/1:84,0:81:37.80:606,38,0	1/1:29,0:35:57.45:963,57,0	0/0:27,0:27:0.89:0,1,2	1/1:36,0:36:53.62:559,54,0	1/1:23,0:21:26.90:275,27,0	1/1:34,1:34:39.98:607,40,0	1/1:24,0:25:34.63:481,35,0	1/1:6,0:6:4.81:30,5,0
chr10	40611836	.	G	GTGTA	7665.61	PASS	AB=1.000;AC=35;AF=0.625;AN=56;BaseQRankSum=-5.563;DP=874;FS=1.763;HRun=0;HaplotypeScore=244.4880;InbreedingCoeff=-0.0215;MQ=48.94;MQ0=19;MQRankSum=2.724;QD=9.70;ReadPosRankSum=9.549;VQSLOD=2.8281;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:35,0:34:36.29:276,0,36	1/1:13,0:13:10.26:83,10,0	0/0:25,0:13:20.92:0,21,183	0/0:28,0:15:33.01:0,33,320	0/0:26,0:25:2.99:0,3,24	1/1:18,3:20:35.37:440,35,0	1/1:25,4:27:23.88:338,24,0	0/1:43,0:38:99:414,0,100	1/1:26,9:33:48.83:869,49,0	0/1:32,0:30:21.67:528,0,22	1/1:26,0:26:28.28:347,28,0	1/1:35,0:33:4.31:286,4,0	0/1:25,0:25:12.34:12,0,258	0/1:30,0:30:6.01:6,0,168	0/1:39,0:39:95.91:264,0,96	1/1:37,0:37:30.46:492,30,0	0/1:41,0:39:59.67:404,0,60	0/1:27,0:27:18.58:279,0,19	0/1:26,0:22:71.82:227,0,72	1/1:27,0:26:18.06:142,18,0	1/1:84,0:81:29.31:541,29,0	1/1:39,0:39:7.93:399,8,0	0/1:28,0:28:7.51:8,0,56	0/1:37,0:37:15.33:400,0,15	1/1:22,0:20:26.64:250,27,0	0/1:34,0:32:34.66:421,0,35	0/1:25,0:25:12.06:241,0,12	0/0:5,0:5:7.82:0,8,41
chr10	40611838	.	G	GTA	6421.47	PASS	AB=0.992;AC=29;AF=0.518;AN=56;BaseQRankSum=-5.299;DP=860;FS=7.267;HRun=0;HaplotypeScore=222.5706;InbreedingCoeff=-0.0312;MQ=47.91;MQ0=21;MQRankSum=1.186;QD=9.19;ReadPosRankSum=7.640;VQSLOD=3.1029;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:34,0:33:55.78:231,0,56	0/1:14,0:14:20.29:68,0,20	0/0:23,0:12:20.02:0,20,178	0/0:27,0:13:33.01:0,33,320	0/0:26,0:25:2.99:0,3,24	1/1:17,2:18:26.30:337,26,0	1/1:29,1:28:22.92:204,23,0	0/1:44,0:38:99:409,0,155	1/1:32,4:34:44.43:805,44,0	0/1:31,0:29:70.51:363,0,71	1/1:26,0:26:2.03:284,2,0	0/1:33,1:32:34.35:201,0,34	0/0:25,0:25:39.83:0,40,398	0/0:29,0:29:16.89:0,17,185	0/1:39,0:39:99:229,0,110	1/1:36,0:36:27.40:360,27,0	0/1:37,2:37:99:340,0,100	0/1:27,0:27:13.51:254,0,14	0/1:26,0:22:75.70:192,0,76	1/1:27,0:26:3.80:112,4,0	1/1:83,0:80:13.64:522,14,0	0/1:37,1:38:57.52:342,0,58	0/0:28,0:28:4.98:0,5,64	0/1:37,0:37:61.36:307,0,61	1/1:22,0:20:30.25:264,30,0	0/1:34,0:32:65.04:391,0,65	0/1:23,0:23:21.61:206,0,22	0/0:3,0:3:7.95:0,8,41
chr10	40611862	.	GTA	G	1300.78	PASS	AB=0.985;AC=22;AF=0.393;AN=56;BaseQRankSum=-5.019;DP=746;FS=25.686;HRun=0;HaplotypeScore=220.3040;InbreedingCoeff=-0.4207;MQ=47.36;MQ0=19;MQRankSum=-1.145;QD=2.17;ReadPosRankSum=-4.047;VQSLOD=0.1898;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:34,0:33:99:118,0,180	0/1:11,0:11:11.05:28,0,11	0/0:8,0:2:3.88:0,4,26	0/0:10,0:4:2.88:0,3,15	0/0:21,0:20:11.97:0,12,95	0/1:16,1:16:4.56:78,0,5	0/1:35,0:33:18.27:46,0,18	0/1:33,2:29:92.67:102,0,93	0/1:34,0:32:20.70:21,0,74	0/1:31,0:29:74.81:75,0,142	0/1:25,1:26:7.92:42,0,8	0/1:31,1:30:17.56:135,0,18	0/1:26,0:26:16.13:16,0,390	0/0:27,0:27:32.30:0,32,253	0/0:35,2:37:7.76:0,8,380	0/1:29,2:31:65.46:65,0,192	0/1:36,0:34:0.36:0,0,350	0/1:23,0:24:49.79:94,0,50	0/1:13,0:9:4.78:5,0,47	0/0:23,0:22:1.04:0,1,8	0/1:75,0:72:2.79:101,0,3	0/1:34,0:33:99:123,0,180	0/0:20,0:20:21.41:0,21,163	0/1:38,1:39:99:180,0,108	0/1:17,0:16:4.87:39,0,5	0/1:28,0:26:17.83:107,0,18	1/1:19,0:19:0.92:67,1,0	0/1:3,0:3:2.11:2,0,4
chr10	40611875	.	TGC	T	4306.64	PASS	AB=0.961;AC=36;AF=0.643;AN=56;BaseQRankSum=-3.573;DP=660;FS=11.943;HRun=0;HaplotypeScore=192.5331;InbreedingCoeff=0.2537;MQ=49.00;MQ0=10;MQRankSum=1.219;QD=8.16;ReadPosRankSum=-4.096;VQSLOD=2.9433;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:31,0:30:30.96:31,0,162	1/1:6,2:8:12.04:167,12,0	0/1:13,0:5:3.49:3,0,67	0/0:17,0:9:4.02:0,4,109	0/0:11,0:11:11.92:0,12,87	1/1:12,5:16:23.55:259,24,0	1/1:5,29:33:23.88:332,24,0	1/1:7,20:26:57.07:672,57,0	1/1:11,20:30:5.55:354,6,0	1/1:13,15:26:42.09:550,42,0	1/1:6,19:25:12.02:168,12,0	0/1:27,0:25:22.77:23,0,28	0/1:26,0:26:24.91:25,0,248	0/0:23,0:23:11.83:0,12,214	0/1:35,1:36:69.26:69,0,323	0/0:25,0:26:12.96:0,13,189	0/0:28,0:29:38.53:0,39,349	1/1:9,9:18:20.88:226,21,0	0/1:10,3:11:14.19:133,0,14	1/1:5,17:21:3.56:80,4,0	1/1:12,49:60:18.02:251,18,0	0/0:25,0:24:0.81:0,1,134	0/1:22,0:22:14.35:14,0,113	0/1:33,0:34:36.16:36,0,114	1/1:2,13:14:1.55:61,2,0	1/1:7,12:19:39.09:496,39,0	1/1:12,2:14:20.43:252,20,0	1/1:5,0:5:9:106,9,0
chr10	40611947	.	A	ATG	8013.88	PASS	AB=0.552;AC=51;AF=0.911;AN=56;BaseQRankSum=4.113;DP=741;FS=3.439;HRun=0;HaplotypeScore=197.9075;InbreedingCoeff=0.6928;MQ=42.16;MQ0=29;MQRankSum=2.778;QD=11.67;ReadPosRankSum=0.511;VQSLOD=4.5414;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:26,4:28:5.83:70,6,0	1/1:15,0:13:9.93:105,10,0	0/0:23,0:9:18.04:0,18,214	0/0:31,0:16:24.06:0,24,291	1/1:9,2:10:4.26:50,4,0	1/1:18,0:18:35.23:378,35,0	1/1:31,1:31:22.67:447,23,0	1/1:31,0:24:54.12:733,54,0	1/1:25,0:24:23.03:252,23,0	1/1:34,0:30:73.40:875,73,0	1/1:19,1:19:3.01:43,3,0	1/1:5,35:40:17.09:230,17,0	1/1:27,3:29:47.39:596,47,0	1/1:28,7:34:11.77:162,12,0	1/1:20,11:30:26.82:413,27,0	1/1:26,8:33:18.66:215,19,0	1/1:24,2:26:37.18:385,37,0	1/1:17,2:18:33.55:351,34,0	1/1:16,1:15:29.89:292,30,0	1/1:10,1:11:9.03:139,9,0	1/1:58,2:57:36.04:511,36,0	1/1:24,5:29:20.73:246,21,0	1/1:20,4:23:24.87:330,25,0	0/1:7,30:37:0.01:0,0,0	1/1:18,0:16:17.93:207,18,0	1/1:32,0:29:59.86:696,60,0	1/1:25,0:24:16.77:204,17,0	1/1:3,0:3:6.02:83,6,0
chr10	40611949	.	GTGTGTGTA	G	6941.08	PASS	AB=1.000;AC=39;AF=0.696;AN=56;BaseQRankSum=-3.881;DP=740;FS=1.132;HRun=0;HaplotypeScore=236.2772;InbreedingCoeff=0.2722;MQ=41.66;MQ0=27;MQRankSum=1.737;QD=12.03;ReadPosRankSum=1.709;VQSLOD=3.3806;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:35,0:33:12.36:12,0,40	1/1:14,0:12:11.75:134,12,0	0/0:22,0:8:21.05:0,21,293	0/0:30,0:15:26.94:0,27,400	0/1:11,0:10:34.34:39,0,34	1/1:19,0:19:38.08:425,38,0	1/1:34,0:33:30.90:493,31,0	1/1:16,14:23:54.01:743,54,0	1/1:25,0:24:21.94:207,22,0	1/1:33,0:29:72.72:978,73,0	1/1:17,0:16:2.81:42,3,0	0/0:39,0:39:10.83:0,11,163	0/1:29,0:28:39.15:494,0,39	0/1:34,0:33:71.30:79,0,71	0/1:30,0:29:66:119,0,66	0/0:34,0:33:3.51:0,4,148	0/1:25,0:25:58.63:240,0,59	1/1:18,0:17:15.78:343,16,0	1/1:19,0:17:31.78:287,32,0	1/1:11,0:11:8.18:161,8,0	1/1:62,0:59:33.55:528,34,0	1/1:28,0:29:20.44:246,20,0	0/1:24,0:23:90.29:182,0,90	0/0:38,0:38:2.53:0,3,21	1/1:18,0:16:15.46:192,15,0	1/1:32,0:29:47.75:752,48,0	1/1:25,0:24:6.10:161,6,0	1/1:3,0:3:6.02:82,6,0
chr10	40611955	.	GTA	G	5094.19	PASS	AB=0.954;AC=48;AF=0.857;AN=56;BaseQRankSum=2.025;DP=736;FS=13.228;HRun=0;HaplotypeScore=210.6629;InbreedingCoeff=0.4628;MQ=41.18;MQ0=27;MQRankSum=-0.443;QD=7.79;ReadPosRankSum=4.044;VQSLOD=2.9889;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:32,6:37:6.41:39,6,0	1/1:7,7:12:14.57:105,15,0	0/0:21,0:10:23.02:0,23,266	0/0:25,0:13:31.48:0,31,389	1/1:9,3:11:1.86:41,2,0	1/1:11,8:19:30.41:258,30,0	1/1:25,11:35:37.44:288,37,0	1/1:23,4:20:48.13:344,48,0	1/1:14,12:25:25.70:214,26,0	1/1:23,10:29:67.51:568,68,0	1/1:8,8:15:2.99:23,3,0	0/1:38,2:40:11.12:11,0,69	1/1:19,9:27:46.36:455,46,0	1/1:8,24:31:1.47:50,1,0	1/1:25,6:30:6.26:71,6,0	1/1:14,22:35:9.37:165,9,0	1/1:17,8:25:41.07:376,41,0	1/1:14,6:19:37.76:250,38,0	1/1:19,3:20:22.53:202,23,0	1/1:4,7:11:7.68:66,8,0	1/1:45,14:56:37.61:292,38,0	1/1:18,12:30:21.39:173,21,0	0/1:21,1:21:57.82:58,0,61	0/0:36,0:36:2.53:0,3,43	1/1:9,11:18:21.78:175,22,0	1/1:18,11:26:64.66:516,65,0	1/1:9,15:23:40.06:314,40,0	1/1:2,1:3:5.94:40,6,0
chr10	40611957	.	A	ATG	1698.23	PASS	AB=0.967;AC=28;AF=0.519;AN=54;BaseQRankSum=-3.200;DP=742;FS=0.593;HRun=0;HaplotypeScore=228.4343;InbreedingCoeff=-0.1647;MQ=41.06;MQ0=27;MQRankSum=4.174;QD=2.72;ReadPosRankSum=-0.810;VQSLOD=2.5236;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:39,2:39:13.05:36,0,13	0/1:16,0:14:6.99:11,0,7	0/0:20,0:10:17.83:0,18,171	0/0:23,0:12:22.95:0,23,210	0/1:13,0:12:5.24:37,0,5	0/1:19,0:19:19.53:55,0,20	1/1:38,0:37:9.46:62,9,0	1/1:29,0:21:22.44:133,22,0	1/1:26,0:25:0.28:50,0,0	0/1:35,0:31:30.64:117,0,31	0/1:15,0:14:0.12:0,0,0	0/1:34,5:39:19.85:134,0,20	0/1:27,1:27:17.31:151,0,17	0/1:27,5:31:0.66:75,0,1	1/1:26,5:30:20.82:329,21,0	0/1:32,3:34:10.27:110,0,10	0/1:25,1:26:26.96:53,0,27	0/1:20,1:20:7.67:80,0,8	0/1:20,0:18:11.63:21,0,12	0/0:12,0:12:0.05:0,0,1	1/1:60,0:57:1.68:26,2,0	1/1:26,2:28:8.11:128,8,0	0/1:22,1:21:35.99:179,0,36	0/0:34,1:35:2.97:0,3,22	0/1:20,0:18:3.35:27,0,3	0/1:29,0:26:35.38:35,0,37	0/0:24,0:23:23.33:0,23,112	./.
chr10	40611961	.	GTGTGTA	G	6469.17	PASS	AB=1.000;AC=38;AF=0.679;AN=56;BaseQRankSum=-3.538;DP=755;FS=0.000;HRun=0;HaplotypeScore=241.1548;InbreedingCoeff=0.4277;MQ=41.06;MQ0=28;MQRankSum=1.876;QD=10.87;ReadPosRankSum=-1.051;VQSLOD=3.2404;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:44,0:42:9.47:148,0,9	1/1:17,0:15:20.99:311,21,0	0/0:17,0:8:17.99:0,18,239	0/0:21,0:10:26.99:0,27,342	0/0:14,0:13:6.35:0,6,43	1/1:18,1:19:29.83:443,30,0	1/1:43,0:42:33.56:418,34,0	1/1:35,0:26:27.47:501,27,0	1/1:26,0:25:26.69:364,27,0	1/1:34,1:31:59.56:919,60,0	1/1:15,0:14:5.55:65,6,0	0/0:37,0:37:16.89:0,17,191	0/1:28,0:27:7.04:77,0,7	0/1:31,0:30:11.48:11,0,66	0/1:31,0:30:6.15:6,0,81	0/0:37,0:36:2.41:0,2,89	0/1:27,0:27:6.50:55,0,6	1/1:19,0:19:37.20:356,37,0	1/1:9,11:17:44.20:466,44,0	1/1:14,0:14:17.10:214,17,0	1/1:58,0:55:36.49:441,36,0	1/1:29,0:29:3.36:118,3,0	0/1:24,0:22:55.25:55,0,127	0/0:34,0:34:4.07:0,4,41	1/1:21,0:19:22.60:355,23,0	1/1:30,1:28:62.79:759,63,0	1/1:25,0:24:36.33:385,36,0	1/1:2,0:2:0.89:2,1,0
chr10	40611963	.	GTGTA	G	7101.56	PASS	AB=0.976;AC=46;AF=0.821;AN=56;BaseQRankSum=1.329;DP=754;FS=5.616;HRun=0;HaplotypeScore=226.6933;InbreedingCoeff=0.2697;MQ=40.84;MQ0=27;MQRankSum=0.443;QD=9.93;ReadPosRankSum=1.209;VQSLOD=3.8715;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:20,25:43:10.77:147,11,0	1/1:17,0:15:20.58:185,21,0	0/0:19,0:9:14.17:0,14,316	0/0:20,0:10:29.96:0,30,369	1/1:11,3:13:8.33:62,8,0	1/1:17,1:18:29.88:426,30,0	1/1:38,0:38:29.47:304,29,0	1/1:35,0:26:43.87:369,44,0	1/1:26,0:25:26.81:382,27,0	1/1:36,0:32:44.21:874,44,0	1/1:15,1:15:8.76:63,9,0	0/1:35,0:35:5.57:6,0,102	1/1:27,0:26:46.09:406,46,0	0/1:30,1:30:16.37:28,0,16	0/1:29,2:30:16.89:93,0,17	0/1:34,2:35:13.54:180,0,14	1/1:26,3:29:45.23:450,45,0	1/1:20,0:19:33.91:308,34,0	1/1:20,0:17:40.21:372,40,0	1/1:14,0:14:16.74:123,17,0	1/1:61,0:58:40.70:375,41,0	1/1:27,1:28:18.47:176,18,0	0/1:26,0:24:99:101,0,106	0/1:36,0:36:32.87:33,0,38	1/1:20,0:18:22.57:256,23,0	1/1:26,2:25:66.33:750,66,0	1/1:18,7:24:38.69:624,39,0	1/1:2,0:2:2.37:8,2,0
chr10	40611965	.	GTA	G	5663.27	PASS	AB=0.986;AC=50;AF=0.893;AN=56;BaseQRankSum=2.888;DP=755;FS=1.597;HRun=0;HaplotypeScore=217.7297;InbreedingCoeff=0.1788;MQ=40.93;MQ0=26;MQRankSum=0.973;QD=7.69;ReadPosRankSum=1.825;VQSLOD=4.3411;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:43,0:41:14.63:112,15,0	1/1:12,6:16:21.49:158,21,0	0/1:21,0:10:13.34:13,0,197	0/0:19,0:10:19.07:0,19,320	1/1:13,0:12:0.49:74,0,0	1/1:11,6:17:29.45:243,29,0	1/1:31,6:36:29.22:236,29,0	1/1:32,4:27:37.69:301,38,0	1/1:14,12:25:25.84:217,26,0	1/1:27,8:31:49.24:614,49,0	1/1:9,7:15:8.98:73,9,0	0/1:33,2:35:28.55:29,0,46	1/1:28,0:27:44.83:405,45,0	1/1:31,0:30:6.21:57,6,0	1/1:31,0:30:16.34:111,16,0	1/1:35,1:35:11.99:188,12,0	1/1:30,0:30:50.53:459,51,0	1/1:16,4:19:34.50:228,34,0	1/1:17,3:17:41.56:295,42,0	1/1:9,5:14:15.19:120,15,0	1/1:51,8:56:36.84:295,37,0	1/1:29,0:29:18.04:128,18,0	0/1:26,0:24:17.25:175,0,17	0/1:38,0:38:15.50:33,0,16	1/1:14,9:21:31.47:255,31,0	1/1:20,8:25:66.31:528,66,0	1/1:11,13:23:37.03:297,37,0	1/1:1,1:2:2.97:20,3,0
chr10	40611967	.	A	ATGTGTG	3747.65	PASS	AB=1.000;AC=43;AF=0.768;AN=56;BaseQRankSum=-4.040;DP=751;FS=0.614;HRun=0;HaplotypeScore=247.3810;InbreedingCoeff=-0.0922;MQ=40.95;MQ0=26;MQRankSum=3.173;QD=5.12;ReadPosRankSum=-5.582;VQSLOD=1.0427;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:42,1:41:17.31:174,17,0	0/1:18,0:16:8.69:96,0,9	0/1:26,0:12:18.78:19,0,217	0/0:18,0:10:20.92:0,21,248	1/1:13,0:12:5.04:45,5,0	1/1:16,0:16:12.45:93,12,0	1/1:36,0:35:10.57:163,11,0	1/1:35,0:26:33.56:286,34,0	0/1:27,0:26:11:159,0,11	0/1:35,0:31:79.68:257,0,80	1/1:17,0:16:8.83:63,9,0	0/1:33,0:33:29.90:30,0,57	1/1:27,0:26:30.85:239,31,0	1/1:28,3:30:8.72:54,9,0	1/1:26,5:30:18.24:140,18,0	1/1:32,2:34:22.06:300,22,0	1/1:29,0:29:36.04:335,36,0	1/1:19,0:19:2.54:146,3,0	0/1:17,0:14:9.21:167,0,9	1/1:13,0:13:11.67:77,12,0	1/1:58,0:56:19.54:175,20,0	1/1:28,1:29:13.17:134,13,0	0/1:26,0:24:54.21:54,0,62	0/1:37,0:37:32.38:32,0,36	1/1:24,0:22:0.22:217,0,0	0/1:29,0:26:31.41:216,0,31	0/1:24,0:23:77.28:77,0,185	0/1:2,0:2:0:0,0,0
chr10	40612160	.	A	ACAT	33728.85	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=1.838;DP=680;FS=0.507;HRun=0;HaplotypeScore=127.5389;InbreedingCoeff=0.9467;MQ=82.68;MQ0=0;MQRankSum=-12.340;QD=54.84;ReadPosRankSum=6.978;VQSLOD=6.6508;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,46:50:99:2834,126,0	1/1:1,10:11:27.09:610,27,0	0/0:36,0:36:99:0,99,1489	0/0:29,0:29:68.37:0,68,1115	1/1:3,13:16:30.10:674,30,0	1/1:2,9:11:24.08:543,24,0	1/1:4,24:29:69.24:1558,69,0	1/1:6,20:27:75.25:1623,75,0	1/1:3,21:25:60.21:1356,60,0	1/1:2,26:29:84.29:1890,84,0	1/1:2,18:21:54.19:1223,54,0	1/1:3,22:26:72.25:1603,72,0	1/1:3,13:16:33.11:746,33,0	1/1:3,21:23:54.19:1215,54,0	1/1:1,22:23:60.21:1356,60,0	1/1:3,21:24:60.21:1355,60,0	1/1:3,22:25:63.22:1364,63,0	1/1:4,26:30:78.27:1751,78,0	1/1:2,10:13:36.12:748,36,0	1/1:2,22:26:60.21:1353,60,0	1/1:8,28:36:69.16:1559,69,0	1/1:1,20:23:57.20:1285,57,0	1/1:1,19:20:54.19:1220,54,0	1/1:1,25:27:57.20:1281,57,0	1/1:1,31:32:78.27:1765,78,0	1/1:2,24:28:75.23:1596,75,0	1/1:1,17:18:48.16:1085,48,0	1/1:0,2:2:6.02:136,6,0
chr10	40612561	.	G	GT	6863.83	PASS	AB=1.000;AC=31;AF=0.554;AN=56;BaseQRankSum=-5.175;DP=431;FS=0.830;HRun=8;HaplotypeScore=106.1287;InbreedingCoeff=0.8870;MQ=74.08;MQ0=0;MQRankSum=-2.711;QD=25.80;ReadPosRankSum=-1.343;VQSLOD=4.0266;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:56.59:0,57,521	1/1:1,6:7:18.05:208,18,0	0/0:10,0:8:9.12:0,9,103	0/1:21,0:20:33.35:33,0,183	0/0:10,0:10:24.01:0,24,220	1/1:4,17:21:29.67:582,30,0	1/1:3,10:13:5.63:319,6,0	1/1:7,26:34:50.72:823,51,0	1/1:1,15:16:45.13:519,45,0	1/1:2,20:22:60.18:692,60,0	1/1:3,7:10:21.06:242,21,0	0/0:12,0:12:33.02:0,33,302	0/0:22,0:22:33.02:0,33,302	0/0:15,0:15:39.02:0,39,357	0/0:21,0:21:63.04:0,63,577	0/0:11,0:11:18.01:0,18,165	0/0:17,0:17:42.03:0,42,385	1/1:2,13:15:39.12:450,39,0	1/1:6,19:25:57.17:658,57,0	1/1:2,8:10:21.06:242,21,0	1/1:1,10:11:30.09:345,30,0	0/0:5,0:5:12.01:0,12,110	0/0:4,0:4:9:0,9,82	0/0:14,0:14:39.02:0,39,357	1/1:1,8:9:21.06:242,21,0	1/1:3,17:20:51.14:579,51,0	1/1:4,18:23:62.99:694,63,0	1/1:2,6:8:21.06:237,21,0
chr10	40612632	.	ATGCTCGCG	A	5500.15	PASS	AB=0.983;AC=36;AF=0.692;AN=52;BaseQRankSum=3.642;DP=354;FS=46.233;HRun=0;HaplotypeScore=110.1012;InbreedingCoeff=0.0227;MQ=66.69;MQ0=6;MQRankSum=-3.022;QD=21.07;ReadPosRankSum=8.023;VQSLOD=2.0314;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:12:17.50:289,17,0	0/0:1,0:1:2.98:0,3,21	0/0:37,0:25:64.60:0,65,1943	0/0:46,0:29:66.65:0,67,1740	./.	0/1:16,0:16:47.97:229,0,48	0/1:19,1:20:16.45:506,0,16	1/1:20,0:19:26.73:708,27,0	0/1:15,0:14:2.68:141,0,3	1/1:8,0:8:13.86:176,14,0	0/1:4,0:4:35.85:44,0,36	0/1:9,0:9:1.12:175,0,1	1/1:2,11:13:2.74:55,3,0	0/1:12,0:12:18.79:198,0,19	0/1:11,0:11:44.71:144,0,45	1/1:1,11:12:6.02:163,6,0	1/1:15,0:14:19.93:327,20,0	1/1:8,0:8:21.05:326,21,0	0/1:24,1:22:13.75:413,0,14	0/1:4,0:4:10.95:54,0,11	1/1:11,1:12:4.19:350,4,0	./.	1/1:1,0:1:3.01:50,3,0	1/1:12,0:12:18.72:241,19,0	1/1:1,0:1:2.99:24,3,0	1/1:11,0:9:21.53:285,22,0	0/1:10,1:11:10.85:297,0,11	1/1:8,0:7:21.06:307,21,0
chr10	40612633	.	TGCTCGCGC	T	9355.40	PASS	AB=0.917;AC=45;AF=0.900;AN=50;BaseQRankSum=0.886;DP=345;FS=1.382;HRun=0;HaplotypeScore=93.4947;InbreedingCoeff=0.6025;MQ=64.31;MQ0=6;MQRankSum=-5.460;QD=36.54;ReadPosRankSum=2.295;VQSLOD=4.7286;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:12:32.97:542,33,0	./.	0/0:36,0:24:60.42:0,60,1406	0/0:43,0:26:64.50:0,64,1310	./.	1/1:14,2:16:29.97:464,30,0	1/1:19,1:20:42.04:828,42,0	1/1:1,18:18:54.17:1115,54,0	1/1:14,0:14:32.98:413,33,0	1/1:7,0:8:24.03:379,24,0	1/1:3,0:3:3.48:77,3,0	1/1:7,1:8:21:310,21,0	1/1:13,0:13:9.01:103,9,0	1/1:12,0:12:21.02:381,21,0	0/1:10,0:11:1.73:255,0,2	1/1:11,1:12:6.02:169,6,0	1/1:15,0:14:24.06:521,24,0	1/1:6,2:8:24.05:492,24,0	1/1:23,0:20:42.10:759,42,0	1/1:4,0:4:6.02:108,6,0	1/1:11,0:12:27.04:545,27,0	./.	1/1:1,0:1:3.01:74,3,0	1/1:9,2:12:21.16:398,21,0	1/1:1,0:1:3.01:51,3,0	1/1:10,1:9:24.08:466,24,0	1/1:11,0:11:24.08:449,24,0	1/1:8,0:7:21.07:456,21,0
chr10	40612671	.	CTCTCTT	C	2983.85	PASS	AB=1.000;AC=44;AF=0.786;AN=56;BaseQRankSum=-4.701;DP=357;FS=3.452;HRun=0;HaplotypeScore=81.2401;InbreedingCoeff=-0.1651;MQ=57.59;MQ0=15;MQRankSum=-0.603;QD=8.48;ReadPosRankSum=-2.836;VQSLOD=0.7281;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:20:10.64:242,11,0	1/1:2,0:1:2.99:23,3,0	0/1:21,0:8:16.60:17,0,50	0/1:36,0:14:23.48:23,0,88	0/1:9,0:9:11.67:59,0,12	1/1:14,2:16:32.98:332,33,0	1/1:13,1:13:24.47:240,24,0	1/1:27,0:26:18.32:254,18,0	1/1:16,0:14:22.23:164,22,0	1/1:6,0:6:15.10:111,15,0	1/1:4,0:4:2.83:24,3,0	1/1:7,0:7:6.01:83,6,0	1/1:8,0:8:11.97:95,12,0	1/1:9,0:9:11.98:100,12,0	0/1:7,0:7:20.53:41,0,21	0/1:11,0:11:13.90:66,0,14	0/1:20,0:19:17.17:160,0,17	1/1:9,1:9:22.15:230,22,0	1/1:21,0:18:29.05:229,29,0	1/1:10,0:10:18.45:150,18,0	0/1:12,0:12:14.57:15,0,59	0/0:5,0:4:2.66:0,3,25	1/1:5,0:5:14.98:125,15,0	1/1:21,0:21:6.55:74,7,0	1/1:6,0:6:5.99:50,6,0	0/1:10,0:8:46.79:72,0,47	0/1:15,0:14:77.64:98,0,78	0/1:8,0:7:32.16:59,0,32
chr10	40612675	.	CTT	C	4046.86	PASS	AB=1.000;AC=54;AF=0.964;AN=56;BaseQRankSum=-2.615;DP=340;FS=11.656;HRun=3;HaplotypeScore=55.2517;InbreedingCoeff=-0.0617;MQ=61.24;MQ0=11;MQRankSum=-3.464;QD=11.90;ReadPosRankSum=4.020;VQSLOD=-0.5829;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:20:41.91:339,42,0	1/1:2,0:1:2.99:23,3,0	0/1:22,0:9:19.32:19,0,41	0/1:35,0:15:21.04:21,0,121	1/1:10,0:10:17.95:143,18,0	1/1:13,0:13:32.98:289,33,0	1/1:13,0:13:29.98:258,30,0	1/1:24,0:24:46.52:360,47,0	1/1:16,0:14:23.58:186,24,0	1/1:1,4:5:13.24:106,13,0	1/1:3,0:3:2.99:24,3,0	1/1:4,0:4:5.97:54,6,0	1/1:6,0:6:11.97:95,12,0	1/1:9,0:9:11.99:100,12,0	1/1:7,0:7:8.88:90,9,0	1/1:9,0:9:11.79:81,12,0	1/1:20,0:20:27.21:196,27,0	1/1:11,0:10:22.45:176,22,0	1/1:17,0:15:32.70:283,33,0	1/1:10,0:10:17.98:150,18,0	1/1:13,0:13:23.97:200,24,0	1/1:5,0:4:2.72:25,3,0	1/1:5,0:5:14.98:125,15,0	1/1:5,14:19:6.43:46,6,0	1/1:6,0:6:8.99:75,9,0	1/1:10,0:8:20.82:160,21,0	1/1:15,0:14:36.45:253,36,0	1/1:10,0:9:22.20:171,22,0
chr10	40612816	.	A	AT	2077.18	PASS	AB=1.000;AC=47;AF=0.839;AN=56;BaseQRankSum=0.578;DP=167;FS=8.386;HRun=1;HaplotypeScore=59.8617;InbreedingCoeff=0.3924;MQ=49.48;MQ0=5;MQRankSum=1.241;QD=13.67;ReadPosRankSum=0.971;VQSLOD=2.1556;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,1:1:3.01:39,3,0	0/1:6,0:6:0:0,0,0	0/0:3,0:1:3:0,3,26	0/0:12,0:6:6.93:0,7,50	1/1:6,0:6:11.89:113,12,0	0/1:14,0:14:0:0,0,0	1/1:4,0:4:3.01:38,3,0	1/1:11,0:10:30.09:376,30,0	1/1:6,0:6:5.99:61,6,0	1/1:5,0:5:15:164,15,0	1/1:0,6:5:6.02:78,6,0	1/1:3,0:3:8.96:97,9,0	1/1:5,0:5:11.95:134,12,0	1/1:5,0:5:5.23:42,5,0	1/1:7,0:7:17.99:205,18,0	1/1:2,0:2:5.93:57,6,0	1/1:6,1:6:17.84:159,18,0	1/1:6,0:6:1.91:28,2,0	1/1:6,0:6:8.96:81,9,0	1/1:4,0:4:12.04:157,12,0	1/1:4,0:4:5.99:61,6,0	1/1:3,0:3:6.02:78,6,0	1/1:3,0:3:3.01:39,3,0	1/1:1,0:1:3:25,3,0	0/1:9,0:9:0:0,0,0	1/1:12,0:10:14.97:148,15,0	0/1:9,0:9:0:0,0,0	0/1:4,0:4:0:1,0,0
chr10	40612817	.	TA	T	1976.91	PASS	AC=50;AF=0.926;AN=54;BaseQRankSum=1.505;DP=152;FS=2.454;HRun=1;HaplotypeScore=57.1693;InbreedingCoeff=0.2631;MQ=50.88;MQ0=5;MQRankSum=-0.013;QD=14.54;ReadPosRankSum=1.860;VQSLOD=3.3443;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,2:1:3.01:39,3,0	1/1:0,0:6:2.84:14,3,0	0/0:3,0:1:3:0,3,26	0/0:13,0:6:6.93:0,7,51	1/1:0,5:5:12.03:141,12,0	1/1:0,0:14:2.84:14,3,0	1/1:0,0:4:3.01:38,3,0	1/1:0,9:8:24.07:300,24,0	1/1:0,0:5:5.99:61,6,0	1/1:0,4:4:12.03:144,12,0	1/1:6,0:5:5.88:50,6,0	1/1:0,3:3:9.03:111,9,0	1/1:0,5:5:12.04:148,12,0	1/1:0,4:4:3.01:37,3,0	1/1:0,5:5:12.04:145,12,0	1/1:0,2:2:6.02:71,6,0	1/1:2,5:6:18.01:194,18,0	1/1:0,0:5:5.05:40,5,0	1/1:1,1:5:5.97:43,6,0	1/1:0,3:3:9.03:118,9,0	1/1:0,0:3:5.99:61,6,0	1/1:0,2:2:6.02:78,6,0	./.	1/1:1,0:1:3:25,3,0	1/1:0,0:9:2.84:14,3,0	1/1:0,2:10:14.97:142,15,0	1/1:0,0:9:2.84:14,3,0	1/1:0,0:4:8.52:43,9,0
chr10	40612830	.	ATATATATATATATATATAT	A	4300.22	PASS	AB=1.000;AC=45;AF=0.938;AN=48;BaseQRankSum=2.124;DP=147;FS=3.055;HRun=0;HaplotypeScore=79.3682;InbreedingCoeff=0.1767;MQ=31.62;MQ0=5;MQRankSum=2.357;QD=37.72;ReadPosRankSum=1.657;VQSLOD=3.3709;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:3,0:1:0:0,0,0	1/1:6,0:6:3.01:132,3,0	./.	0/0:26,0:4:5.52:0,6,38	1/1:2,3:5:14.98:397,15,0	1/1:14,0:14:3.01:132,3,0	1/1:3,0:3:3.01:76,3,0	1/1:6,0:6:14.94:160,15,0	1/1:5,0:5:6.02:141,6,0	1/1:2,0:2:2.94:18,3,0	1/1:3,0:3:6.02:173,6,0	1/1:2,0:2:6.02:189,6,0	1/1:5,0:5:11.97:243,12,0	1/1:2,0:2:3.01:128,3,0	1/1:2,2:4:9.03:335,9,0	1/1:1,1:2:5.97:173,6,0	1/1:7,0:7:18.06:675,18,0	1/1:3,0:3:6:100,6,0	1/1:3,0:3:6.02:129,6,0	./.	1/1:3,0:3:6.02:125,6,0	1/1:2,0:2:3.01:58,3,0	./.	./.	1/1:9,0:9:3.01:132,3,0	1/1:11,0:10:9.03:253,9,0	1/1:9,0:9:3.01:132,3,0	1/1:5,0:4:9.03:397,9,0
chr10	40612846	.	ATAT	A	842.83	PASS	AB=1.000;AC=33;AF=0.688;AN=48;BaseQRankSum=4.692;DP=162;FS=3.702;HRun=0;HaplotypeScore=62.8876;InbreedingCoeff=0.3226;MQ=31.68;MQ0=8;MQRankSum=-1.022;QD=8.69;ReadPosRankSum=2.409;VQSLOD=2.5978;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:1,1:2:3:32,3,0	1/1:6,0:6:2.98:21,3,0	./.	0/0:34,0:2:3.01:0,3,39	1/1:4,0:4:12.04:155,12,0	1/1:14,0:14:2.98:21,3,0	1/1:1,0:1:1.55:4,2,0	0/0:10,0:10:30.02:0,30,273	0/0:2,0:2:2.12:0,2,9	0/0:2,0:2:5.96:0,6,47	0/1:3,0:3:13.63:14,0,15	1/1:2,0:2:3.01:44,3,0	1/1:4,0:4:12.04:148,12,0	1/1:0,1:1:3.01:47,3,0	1/1:3,0:3:9.03:124,9,0	1/1:1,0:1:3.01:42,3,0	1/1:13,2:13:4.04:196,4,0	0/1:6,0:6:4.47:4,0,6	0/0:4,0:4:8.19:0,8,46	./.	0/0:2,0:2:2.12:0,2,9	1/1:1,0:1:2.88:15,3,0	./.	./.	1/1:9,0:9:2.98:21,3,0	0/1:11,0:11:3.75:12,0,4	1/1:9,0:9:2.98:21,3,0	1/1:5,0:4:8.93:62,9,0
chr10	40612848	.	AT	A	545.13	PASS	AC=28;AF=0.583;AN=48;BaseQRankSum=4.692;DP=161;FS=2.266;HRun=4;HaplotypeScore=60.3224;InbreedingCoeff=0.4586;MQ=31.70;MQ0=8;MQRankSum=-1.231;QD=7.27;ReadPosRankSum=2.931;VQSLOD=0.2330;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,0:2:3.01:32,3,0	1/1:6,0:6:2.22:7,2,0	./.	0/0:34,0:2:3.01:0,3,39	1/1:3,1:4:12.03:128,12,0	1/1:14,0:14:2.22:7,2,0	0/0:1,0:1:0.47:0,0,1	0/0:10,0:10:30.02:0,30,273	0/0:2,0:2:2.87:0,3,15	0/0:2,0:2:5.96:0,6,47	0/0:3,0:3:1.54:0,2,21	1/1:1,0:1:3:29,3,0	1/1:1,3:4:12.03:134,12,0	1/1:1,0:1:3.01:34,3,0	1/1:2,1:3:9.02:97,9,0	1/1:1,0:1:3:28,3,0	1/1:7,8:13:4.02:142,4,0	0/0:6,0:6:5.46:0,5,17	0/0:4,0:4:8.75:0,9,57	./.	0/0:2,0:2:2.87:0,3,15	1/1:0,1:1:2.88:15,3,0	./.	./.	1/1:9,0:9:2.22:7,2,0	0/0:11,0:11:0.56:0,1,10	1/1:9,0:9:2.22:7,2,0	1/1:5,0:4:6.66:20,7,0
chr10	40612859	.	T	TC	937.06	PASS	AB=0.782;AC=19;AF=0.380;AN=50;BaseQRankSum=-0.800;DP=181;FS=1.855;HRun=0;HaplotypeScore=59.1061;InbreedingCoeff=0.4290;MQ=34.24;MQ0=7;MQRankSum=0.214;QD=11.57;ReadPosRankSum=-0.774;VQSLOD=3.8431;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:4:9.02:0,9,100	0/0:6,0:6:3:0,3,25	./.	0/0:34,0:2:3:0,3,29	0/0:4,0:4:12.04:0,12,167	1/1:13,1:14:5.87:34,6,0	1/1:0,3:3:8.96:103,9,0	0/1:10,7:17:99:238,0,368	1/1:1,1:2:2.57:47,3,0	0/0:2,0:2:6.02:0,6,84	0/0:1,0:1:3.01:0,3,42	0/0:1,0:1:3.01:0,3,42	0/0:5,0:5:15.05:0,15,201	0/0:1,0:1:3.01:0,3,42	0/0:3,0:3:9.03:0,9,123	0/0:1,0:1:3.01:0,3,41	0/0:17,0:15:32.41:0,32,298	0/1:7,0:6:0.05:0,0,87	0/1:3,4:7:26.73:176,0,27	1/1:0,1:1:3.01:48,3,0	1/1:2,1:3:6.02:79,6,0	0/0:2,0:2:6.02:0,6,76	./.	./.	0/0:9,0:9:6.01:0,6,66	1/1:10,1:11:14.85:177,15,0	1/1:9,2:11:8.06:101,8,0	1/1:4,1:5:11.78:91,12,0
chr10	40613751	.	T	TCA	37586.05	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-4.365;DP=733;FS=0.523;HRun=0;HaplotypeScore=88.7655;InbreedingCoeff=0.9999;MQ=85.32;MQ0=0;MQRankSum=-12.094;QD=55.36;ReadPosRankSum=7.375;VQSLOD=5.1260;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,32:33:99:2005,99,0	1/1:0,13:13:39.13:792,39,0	0/0:31,0:31:89.52:0,90,1413	0/0:23,0:23:69.22:0,69,1054	1/1:1,29:31:84.29:1707,84,0	1/1:1,21:22:51.18:1036,51,0	1/1:0,26:28:69.24:1402,69,0	1/1:2,34:36:99:2123,105,0	1/1:0,21:21:63.22:1280,63,0	1/1:1,36:37:99:2174,108,0	1/1:1,22:24:66.23:1333,66,0	1/1:2,30:32:90.31:1827,90,0	1/1:1,27:29:84.29:1693,84,0	1/1:5,15:21:57.19:1120,57,0	1/1:2,27:30:72.25:1439,72,0	1/1:1,25:26:66.23:1341,66,0	1/1:2,26:28:72.25:1463,72,0	1/1:1,20:21:51.18:1036,51,0	1/1:0,25:25:75.26:1514,75,0	1/1:0,20:21:57.20:1152,57,0	1/1:3,29:33:81.28:1646,81,0	1/1:2,26:28:75.26:1515,75,0	1/1:3,23:26:75.26:1508,75,0	1/1:2,27:29:75.26:1516,75,0	1/1:1,18:19:48.16:976,48,0	1/1:0,26:27:81.26:1610,81,0	1/1:0,25:25:75.26:1524,75,0	1/1:0,14:14:42.14:853,42,0
chr10	40614367	.	A	AC	1697.48	PASS	AB=0.900;AC=14;AF=0.250;AN=56;BaseQRankSum=13.493;DP=614;FS=4.460;HRun=0;HaplotypeScore=159.0177;InbreedingCoeff=-0.3068;MQ=62.32;MQ0=4;MQRankSum=-15.483;QD=5.39;ReadPosRankSum=1.413;VQSLOD=3.5373;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:26:51.15:0,51,677	0/1:9,0:9:1.60:2,0,67	0/0:24,0:18:47.40:0,47,537	0/0:22,0:17:31.61:0,32,401	0/0:25,0:25:64.90:0,65,924	0/1:18,0:18:17.34:17,0,204	0/1:15,0:15:10.63:11,0,201	0/1:29,17:46:99:670,0,840	0/0:27,0:27:50.57:0,51,356	0/1:25,3:28:99:153,0,376	0/1:23,3:26:99:152,0,149	0/0:23,0:23:69.22:0,69,931	0/0:20,0:18:47.95:0,48,597	0/0:9,0:8:20.80:0,21,263	0/0:24,0:24:51.15:0,51,676	0/0:21,0:21:42.14:0,42,575	0/0:18,0:17:36.11:0,36,480	0/1:13,3:16:99:128,0,119	0/1:19,1:19:39.87:40,0,291	0/1:38,7:45:99:254,0,542	0/1:6,3:9:65.54:66,0,133	0/0:23,0:23:63.20:0,63,842	0/0:26,0:26:78.23:0,78,998	0/0:11,0:11:33.11:0,33,441	0/1:15,1:16:40.45:40,0,151	0/1:22,4:26:99:217,0,284	0/1:29,0:28:3.89:4,0,306	0/1:10,2:12:19.24:94,0,19
chr10	40614382	.	C	CAA	3095.70	PASS	AB=0.996;AC=21;AF=0.375;AN=56;BaseQRankSum=10.535;DP=606;FS=6.509;HRun=13;HaplotypeScore=172.0248;InbreedingCoeff=0.1054;MQ=56.20;MQ0=4;MQRankSum=-6.427;QD=8.97;ReadPosRankSum=5.788;VQSLOD=0.4187;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:19.28:0,19,54	0/1:10,0:10:17.65:107,0,18	0/0:28,0:15:17.71:0,18,168	0/0:17,0:11:8.83:0,9,67	0/1:22,0:23:13.11:13,0,52	1/1:15,0:15:14.01:190,14,0	0/1:15,0:15:13.95:93,0,14	0/0:40,0:40:38.77:0,39,451	1/1:25,0:25:5.52:282,6,0	0/1:31,0:31:62.11:215,0,62	0/1:27,0:27:19.17:257,0,19	0/0:22,0:22:53.52:0,54,462	1/1:18,4:22:41.07:434,41,0	1/1:12,0:11:26.77:292,27,0	0/0:20,0:20:21.22:0,21,61	0/0:20,0:21:9.11:0,9,47	0/0:21,0:21:20.33:0,20,67	0/1:15,0:15:29.33:99,0,29	0/1:25,0:24:99:138,0,116	0/1:41,0:41:99:323,0,119	0/0:8,0:8:2.78:0,3,34	0/0:21,0:22:20.29:0,20,91	0/0:27,0:27:53.08:0,53,469	0/0:9,0:9:20.78:0,21,176	1/1:15,0:15:13.66:200,14,0	0/1:24,0:24:90.40:147,0,90	0/1:28,0:27:43.58:335,0,44	0/1:15,0:15:61.74:153,0,62
chr10	40614384	.	A	AC	8166.61	PASS	AB=1.000;AC=47;AF=0.839;AN=56;BaseQRankSum=-1.619;DP=607;FS=0.411;HRun=0;HaplotypeScore=146.9418;InbreedingCoeff=0.7765;MQ=57.88;MQ0=4;MQRankSum=1.616;QD=15.47;ReadPosRankSum=3.512;VQSLOD=6.6075;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,20:22:39.13:504,39,0	1/1:4,6:10:12.92:147,13,0	0/0:29,0:15:18.88:0,19,253	0/0:17,0:10:10.60:0,11,119	1/1:3,19:22:48.34:547,48,0	1/1:5,10:15:35.18:314,35,0	1/1:11,4:15:31.76:245,32,0	1/1:38,2:40:23.37:268,23,0	1/1:8,17:25:55.01:564,55,0	1/1:19,10:29:47.73:442,48,0	1/1:10,17:27:41.04:373,41,0	0/1:24,0:24:25.25:51,0,25	0/0:22,0:20:52.33:0,52,365	0/0:11,0:10:29.36:0,29,204	1/1:1,19:21:39.09:504,39,0	1/1:1,20:21:38.97:468,39,0	1/1:3,20:22:33.23:466,33,0	1/1:8,7:15:12.78:166,13,0	1/1:18,8:25:43.10:331,43,0	1/1:22,19:41:37.68:596,38,0	1/1:6,1:7:3.57:51,4,0	1/1:3,21:24:47.72:528,48,0	1/1:26,0:26:15.65:172,16,0	1/1:13,0:13:4.94:44,5,0	1/1:5,10:15:36.69:309,37,0	1/1:15,9:24:34.44:376,34,0	1/1:11,17:27:49.11:474,49,0	1/1:6,9:15:23.61:226,24,0
chr10	40614386	.	A	AC	77.03	PASS	AB=0.611;AC=3;AF=0.054;AN=56;BaseQRankSum=12.471;DP=604;FS=1.552;HRun=0;HaplotypeScore=175.8683;InbreedingCoeff=-0.1003;MQ=57.70;MQ0=4;MQRankSum=-4.472;QD=1.13;ReadPosRankSum=6.182;VQSLOD=2.1517;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:37.81:0,38,168	0/0:4,6:10:4.96:0,5,66	0/0:30,0:17:24.06:0,24,249	0/0:16,0:9:10.66:0,11,101	0/0:21,0:21:45.15:0,45,250	0/1:5,10:15:56.02:56,0,71	0/0:10,4:14:0.87:0,1,80	0/0:42,2:44:89.18:0,89,827	0/1:9,16:25:57.79:104,0,58	0/0:19,10:29:16.34:0,16,239	0/0:10,17:27:28.80:0,29,226	0/0:23,0:23:68.70:0,69,827	0/0:20,0:18:47.08:0,47,334	0/0:12,0:12:26.73:0,27,216	0/0:21,0:21:39.28:0,39,192	0/0:18,0:18:31.43:0,31,159	0/0:24,0:23:41.97:0,42,221	0/0:9,6:15:2.32:0,2,107	0/0:19,8:26:2.27:0,2,221	0/0:23,18:41:17.81:0,18,428	0/0:6,1:7:19.83:0,20,127	0/0:23,0:23:51.41:0,51,312	0/0:26,0:26:77.89:0,78,905	0/0:14,0:14:38.95:0,39,411	0/0:4,10:14:6.89:0,7,68	0/0:14,9:23:5.64:0,6,222	0/1:11,16:27:13.27:13,0,139	0/0:6,9:15:6.20:0,6,150
chr10	40614388	.	A	ACAAC	9499.02	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=10.656;DP=595;FS=5.615;HRun=0;HaplotypeScore=174.3453;InbreedingCoeff=0.9422;MQ=56.48;MQ0=4;MQRankSum=-12.763;QD=28.19;ReadPosRankSum=1.823;VQSLOD=4.3428;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:42.14:0,42,791	1/1:5,6:11:5.35:344,5,0	0/0:29,0:16:22.46:0,22,316	0/0:14,0:7:11.93:0,12,114	0/0:21,0:21:60.09:0,60,925	1/1:7,0:17:32.58:487,33,0	1/1:10,0:14:21.64:264,22,0	1/1:44,2:46:68.41:694,68,0	1/1:11,0:27:45.22:770,45,0	1/1:19,10:29:48.15:848,48,0	1/1:10,17:27:64.62:984,65,0	0/0:23,0:23:67.47:0,67,1208	0/0:19,0:17:43.70:0,44,382	0/0:13,0:12:35.98:0,36,340	0/0:20,0:20:42.62:0,43,813	0/0:17,0:17:39.10:0,39,708	0/0:24,0:23:48.11:0,48,798	1/1:8,6:14:8.72:398,9,0	1/1:18,8:25:29.13:620,29,0	1/1:21,17:39:42.79:1167,43,0	1/1:5,1:6:2.32:80,2,0	0/0:21,0:21:57.09:0,57,928	0/0:24,0:24:72.15:0,72,1233	0/0:12,0:12:36.06:0,36,503	1/1:3,10:13:35.14:583,35,0	1/1:14,9:23:29.54:614,30,0	1/1:13,16:29:19.37:1098,19,0	1/1:6,9:15:22.83:549,23,0
chr10	40615698	.	TTTGG	T	10307.36	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-4.439;DP=672;FS=0.314;HRun=0;HaplotypeScore=222.3444;InbreedingCoeff=0.9997;MQ=83.86;MQ0=0;MQRankSum=-17.667;QD=40.42;ReadPosRankSum=0.308;VQSLOD=4.8441;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,24:27:63.17:1139,63,0	0/0:10,0:10:27.09:0,27,508	0/0:23,0:23:66.23:0,66,1729	0/0:29,0:29:72.25:0,72,1793	1/1:3,23:26:47.95:696,48,0	0/0:23,0:23:66.23:0,66,1235	0/0:21,0:21:57.01:0,57,1057	0/0:41,0:41:92.95:0,93,1631	0/0:22,0:22:66.23:0,66,1230	0/0:31,0:31:75.26:0,75,1314	0/0:19,0:19:54.19:0,54,1014	1/1:4,17:21:51.17:935,51,0	1/1:3,27:30:75.26:1334,75,0	1/1:3,22:25:60.08:979,60,0	1/1:2,28:30:78.27:1455,78,0	1/1:3,13:16:30.05:525,30,0	1/1:1,16:17:42.14:768,42,0	0/0:24,0:24:69.24:0,69,1280	0/0:24,0:24:69.24:0,69,1211	0/0:31,0:31:81.28:0,81,1521	0/0:23,0:23:69.24:0,69,1282	1/1:2,24:26:68.98:1071,69,0	1/1:3,19:22:53.71:899,54,0	1/1:2,13:15:30.10:506,30,0	0/0:18,0:18:54.17:0,54,971	0/0:32,0:32:90.31:0,90,1625	0/0:25,0:24:66.23:0,66,1259	0/0:21,0:21:57.20:0,57,1084
chr10	40618896	.	A	AGGGC	5133.09	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-9.733;DP=629;FS=1.597;HRun=0;HaplotypeScore=101.2828;InbreedingCoeff=0.9941;MQ=73.85;MQ0=0;MQRankSum=-1.746;QD=56.41;ReadPosRankSum=6.038;VQSLOD=6.2638;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:96.18:0,96,1486	0/0:11,0:11:21.07:0,21,385	0/0:11,0:11:27.04:0,27,381	0/0:14,0:14:33.11:0,33,581	0/0:9,0:9:21.07:0,21,386	0/0:15,0:15:45.14:0,45,797	0/0:37,0:37:99:0,102,1814	0/0:26,0:26:57.17:0,57,933	0/0:24,0:24:69.19:0,69,1177	0/0:19,0:19:42.14:0,42,772	0/0:10,0:10:21.07:0,21,386	1/1:1,33:36:81.28:2122,81,0	0/0:22,0:22:63.22:0,63,1158	0/0:32,0:32:90.28:0,90,1594	0/0:28,0:28:78.27:0,78,1413	0/0:13,0:13:30.08:0,30,484	0/0:45,0:45:99:0,120,2135	0/0:22,0:22:60.21:0,60,1104	0/0:18,0:18:53.99:0,54,789	0/0:12,0:11:27.08:0,27,466	0/0:59,0:59:99:0,147,2611	0/0:15,0:15:33.11:0,33,602	1/1:3,10:13:30.02:716,30,0	1/1:4,37:42:87.77:2295,88,0	0/0:17,0:17:45.14:0,45,777	0/0:18,0:18:33.11:0,33,605	0/0:18,0:18:51.17:0,51,925	0/0:10,0:10:30.10:0,30,550
chr10	40620036	.	TG	T	2143.95	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.674;DP=757;FS=1.072;HRun=1;HaplotypeScore=75.1455;InbreedingCoeff=0.9999;MQ=88.75;MQ0=0;MQRankSum=-2.696;QD=35.15;ReadPosRankSum=1.411;VQSLOD=3.7310;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,123,1958	0/0:16,0:16:48.16:0,48,767	0/0:31,0:32:77.36:0,77,1304	0/0:33,0:33:87.90:0,88,1337	0/0:20,0:20:60.19:0,60,936	0/0:21,0:21:60.20:0,60,959	0/0:32,0:32:96.31:0,96,1511	0/0:28,0:28:84.28:0,84,1324	0/0:26,0:26:78.27:0,78,1247	0/0:41,0:41:99:0,120,1917	0/0:18,0:18:51.16:0,51,792	0/0:27,0:27:81.28:0,81,1288	1/1:0,34:34:93.31:1300,93,0	1/1:0,27:27:69.23:965,69,0	0/0:34,0:34:99:0,102,1560	0/0:24,0:24:72.25:0,72,1151	0/0:20,0:20:60.20:0,60,959	0/0:12,0:12:36.12:0,36,570	0/0:28,0:28:84.26:0,84,1315	0/0:18,0:18:54.17:0,54,836	0/0:38,0:38:99:0,114,1791	0/0:21,0:21:60.20:0,60,949	0/0:25,0:25:75.22:0,75,1152	0/0:27,0:27:81.25:0,81,1262	0/0:30,0:30:90.31:0,90,1431	0/0:37,0:37:99:0,111,1760	0/0:27,0:27:81.28:0,81,1295	0/0:19,0:19:57.19:0,57,901
chr10	40620274	.	C	CGT	17052.70	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-19.232;DP=770;FS=1.879;HRun=0;HaplotypeScore=85.5426;InbreedingCoeff=0.9999;MQ=79.82;MQ0=1;MQRankSum=-1.203;QD=50.45;ReadPosRankSum=4.337;VQSLOD=5.6685;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,32:34:90.31:1683,90,0	0/0:11,0:11:33.11:0,33,486	0/0:27,0:27:63.11:0,63,842	0/0:20,0:18:33.27:0,33,503	1/1:1,32:34:84.29:1572,84,0	1/1:0,15:15:39.13:730,39,0	1/1:2,35:37:99:1961,105,0	0/0:33,0:33:93.30:0,93,1335	1/1:2,26:28:72.25:1334,72,0	0/0:38,0:38:99:0,102,1477	0/0:17,0:17:51.17:0,51,751	0/0:40,0:40:99:0,108,1565	1/1:2,30:34:81.28:1516,81,0	1/1:1,25:26:75.26:1403,75,0	1/1:0,32:32:96.33:1798,96,0	1/1:1,27:28:72.25:1348,72,0	1/1:0,31:31:93.32:1742,93,0	0/0:21,0:21:63.21:0,63,927	0/0:13,0:13:39.13:0,39,555	0/0:28,0:28:78.26:0,78,1139	0/0:35,0:35:99:0,102,1470	1/1:0,39:39:99:1965,105,0	0/0:28,0:28:81.26:0,81,1159	0/0:26,0:26:78.26:0,78,1148	0/0:27,0:27:81.24:0,81,1153	0/0:21,0:21:57.18:0,57,821	0/0:36,0:36:99:0,108,1584	0/0:11,0:11:33.11:0,33,483
chr10	40621295	.	T	TTTTTTGTTTTG	16950.67	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-7.500;DP=697;FS=1.258;HRun=0;HaplotypeScore=164.4326;InbreedingCoeff=0.9877;MQ=67.06;MQ0=2;MQRankSum=-12.057;QD=56.69;ReadPosRankSum=0.224;VQSLOD=4.7534;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,29:47:54.18:2799,54,0	0/0:12,0:12:36.12:0,36,1069	0/0:23,0:17:37.08:0,37,595	0/0:32,0:25:46.58:0,47,947	1/1:1,26:34:50.96:1581,51,0	1/1:0,15:19:21.07:1171,21,0	1/1:4,15:23:21.07:1165,21,0	0/0:24,0:24:72.19:0,72,1752	1/1:2,17:23:27.09:1505,27,0	0/0:21,0:21:63.17:0,63,1471	0/0:24,0:24:66.19:0,66,1685	0/0:19,0:19:54.16:0,54,1444	1/1:0,16:22:9.03:502,9,0	1/1:1,17:24:30.10:1672,30,0	1/1:1,26:35:39.13:2157,39,0	1/1:1,11:18:15.52:837,16,0	1/1:3,22:27:24.55:1208,25,0	0/0:32,0:32:90.30:0,90,2634	0/0:23,0:23:60.16:0,60,1426	0/0:26,0:26:66.19:0,66,1894	0/0:36,0:36:99:0,102,2579	1/1:0,23:27:60.11:2352,60,0	0/0:19,0:19:57.18:0,57,1552	0/0:29,0:29:81.28:0,81,2543	0/0:10,0:10:27.08:0,27,643	0/0:27,0:27:72.19:0,72,1989	0/0:30,0:28:90.26:0,90,2207	0/0:11,0:11:33.10:0,33,789
chr10	40621913	.	CG	C	1874.80	PASS	AB=0.553;AC=21;AF=0.404;AN=52;BaseQRankSum=3.508;DP=285;FS=1.245;HRun=2;HaplotypeScore=40.4221;InbreedingCoeff=0.8624;MQ=39.22;MQ0=19;MQRankSum=-1.503;QD=15.89;ReadPosRankSum=1.592;VQSLOD=3.5124;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:4,17:16:26.22:173,0,26	0/0:9,0:9:20.83:0,21,256	./.	./.	1/1:5,6:11:24.01:262,24,0	1/1:0,8:8:12.04:153,12,0	1/1:4,8:8:15.05:191,15,0	0/0:21,0:21:59.94:0,60,710	1/1:5,6:11:29.79:309,30,0	0/0:8,0:8:24.04:0,24,329	0/0:8,0:7:14.97:0,15,176	0/0:6,0:6:14.97:0,15,195	1/1:0,10:9:18.06:229,18,0	1/1:0,11:10:12.04:154,12,0	1/1:2,9:9:12.04:154,12,0	1/1:0,8:7:9.03:111,9,0	1/1:2,7:6:15.05:192,15,0	0/0:15,0:11:23.96:0,24,267	0/0:12,0:10:27.09:0,27,399	0/0:13,0:13:38.85:0,39,462	0/0:6,0:4:11.94:0,12,130	1/1:2,4:5:12.04:153,12,0	0/0:12,0:12:24.54:0,25,334	0/0:9,0:7:9.03:0,9,134	0/0:10,0:9:15.04:0,15,202	0/0:14,0:14:36.07:0,36,477	0/0:10,0:9:21.05:0,21,291	0/0:13,0:13:30.90:0,31,361
chr10	40621928	.	C	CAAAA	3915.87	PASS	AB=1.000;AC=49;AF=0.942;AN=52;BaseQRankSum=-2.618;DP=385;FS=3.592;HRun=15;HaplotypeScore=115.9339;InbreedingCoeff=0.3161;MQ=31.71;MQ0=22;MQRankSum=-2.016;QD=10.53;ReadPosRankSum=-2.167;VQSLOD=0.3291;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:16:0.65:119,1,0	0/0:10,0:10:17.43:0,17,116	./.	./.	1/1:18,0:18:33.10:236,33,0	1/1:7,0:6:12.81:106,13,0	0/1:11,0:8:6.95:37,0,7	1/1:26,0:25:35.99:250,36,0	1/1:11,0:11:10.72:59,11,0	1/1:17,0:18:37.08:300,37,0	1/1:12,0:14:19.43:215,19,0	1/1:12,1:15:29.63:262,30,0	1/1:11,0:10:11.96:110,12,0	1/1:11,0:8:3.02:40,3,0	1/1:12,0:8:8.72:71,9,0	1/1:12,0:10:17.89:155,18,0	1/1:16,0:11:0.06:63,0,0	1/1:16,0:14:8.56:114,9,0	1/1:22,0:19:38.75:288,39,0	1/1:11,0:11:11.18:83,11,0	1/1:6,0:5:5.93:40,6,0	1/1:7,0:6:14.67:109,15,0	1/1:7,2:13:16.41:264,16,0	1/1:5,5:9:6.02:120,6,0	1/1:14,0:14:17.30:120,17,0	1/1:21,0:21:27.67:289,28,0	1/1:23,0:20:27.10:270,27,0	1/1:17,0:15:20.62:196,21,0
chr10	40621936	.	AAAAAAAAGAAAG	A	565.39	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=2.196;DP=368;FS=0.000;HRun=0;HaplotypeScore=147.3402;InbreedingCoeff=0.2609;MQ=34.49;MQ0=19;MQRankSum=-0.540;QD=10.28;ReadPosRankSum=2.907;VQSLOD=2.2426;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:19,0:14:6.81:7,0,101	1/1:1,8:9:24:614,24,0	0/0:9,0:1:3.01:0,3,119	0/0:4,0:1:0:0,0,0	0/1:16,0:16:3.01:3,0,178	0/0:11,0:10:18.31:0,18,131	0/0:9,0:7:9.50:0,9,217	0/0:26,0:25:46.78:0,47,378	0/0:11,0:11:14.95:0,15,173	0/0:16,0:16:44.59:0,45,415	0/0:18,0:16:40.86:0,41,902	0/0:13,0:13:38.18:0,38,1139	0/0:8,0:8:15.96:0,16,101	0/0:11,0:8:6.42:0,6,54	0/0:12,0:8:0.41:0,0,10	0/1:11,0:9:52.12:52,0,69	0/0:15,0:9:3.90:0,4,37	0/0:15,0:11:23.93:0,24,519	0/0:21,0:18:47.20:0,47,431	0/0:11,0:11:24.50:0,24,317	0/0:3,0:3:5.93:0,6,40	0/0:7,0:6:6.61:0,7,50	0/0:9,0:9:20.57:0,21,836	0/0:11,0:9:6.49:0,6,274	0/0:16,0:15:26.76:0,27,453	0/0:21,0:20:53.93:0,54,631	0/0:20,0:17:31.11:0,31,716	0/0:16,0:14:29.24:0,29,304
chr10	40621943	.	AG	A	3428.69	PASS	AB=0.903;AC=44;AF=0.786;AN=56;BaseQRankSum=2.628;DP=380;FS=1.769;HRun=1;HaplotypeScore=85.3233;InbreedingCoeff=0.3246;MQ=36.18;MQ0=17;MQRankSum=-2.316;QD=9.91;ReadPosRankSum=-1.799;VQSLOD=0.7209;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:13,3:13:6.70:70,0,7	0/1:9,0:9:4.43:73,0,4	0/0:14,0:2:5.48:0,5,32	0/1:14,0:5:8.13:9,0,8	1/1:13,2:17:35.69:263,36,0	1/1:10,1:10:24.76:187,25,0	0/1:7,2:7:15.76:68,0,16	1/1:22,3:24:37.06:259,37,0	1/1:7,1:8:8.80:58,9,0	1/1:16,1:17:38.10:228,38,0	1/1:21,0:19:43.28:302,43,0	0/1:16,0:16:17.24:17,0,161	1/1:7,0:7:12.05:63,12,0	1/1:10,1:8:17.85:136,18,0	1/1:8,2:7:10.52:78,11,0	1/1:10,0:9:13.90:76,14,0	0/1:11,3:9:13.22:39,0,13	1/1:13,1:11:20.98:150,21,0	1/1:17,1:16:36.43:199,36,0	1/1:11,1:12:28.58:200,29,0	1/1:5,0:5:11.91:92,12,0	1/1:6,2:7:19.51:154,20,0	0/0:10,0:10:16.83:0,17,123	0/0:10,0:8:5.14:0,5,30	1/1:15,0:14:23.92:157,24,0	1/1:19,3:21:40.83:233,41,0	1/1:19,1:17:30.57:178,31,0	1/1:12,1:11:25.35:141,25,0
chr10	40621947	.	AG	A	2832.32	PASS	AB=0.859;AC=43;AF=0.768;AN=56;BaseQRankSum=2.552;DP=383;FS=2.290;HRun=1;HaplotypeScore=89.1323;InbreedingCoeff=0.4666;MQ=43.58;MQ0=16;MQRankSum=-2.419;QD=9.17;ReadPosRankSum=-1.053;VQSLOD=0.9021;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:13,0:13:28.69:40,0,29	1/1:9,0:9:4.39:68,4,0	0/0:17,0:3:0.11:0,0,82	0/0:20,0:9:0.25:0,0,71	1/1:16,2:17:30.10:223,30,0	1/1:10,0:10:20.97:161,21,0	0/1:9,1:9:31.37:65,0,31	1/1:22,1:22:23.48:207,23,0	0/1:7,1:8:12.97:39,0,13	1/1:17,0:17:34.43:232,34,0	1/1:23,0:21:42.78:305,43,0	0/0:17,0:17:40.29:0,40,442	1/1:6,0:6:9.79:58,10,0	1/1:9,1:7:17.69:130,18,0	1/1:10,2:8:13.12:92,13,0	1/1:11,0:9:11.94:66,12,0	1/1:12,1:9:6.34:37,6,0	1/1:13,0:10:6.23:72,6,0	1/1:17,1:16:29:178,29,0	1/1:11,1:12:27.10:186,27,0	1/1:4,0:4:6:54,6,0	1/1:7,2:8:21.99:152,22,0	0/0:10,0:10:22.72:0,23,323	0/0:10,0:8:5.94:0,6,71	1/1:15,0:15:25.13:183,25,0	1/1:17,2:18:16.59:183,17,0	1/1:20,1:18:16.37:176,16,0	1/1:8,1:7:15.19:90,15,0
chr10	40621951	.	AGAAAG	A	1915.51	PASS	AB=1.000;AC=28;AF=0.500;AN=56;BaseQRankSum=1.145;DP=370;FS=8.469;HRun=0;HaplotypeScore=108.3407;InbreedingCoeff=0.2240;MQ=47.82;MQ0=13;MQRankSum=-1.060;QD=8.40;ReadPosRankSum=-2.701;VQSLOD=1.1325;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:15,0:12:34.62:119,0,35	1/1:9,0:9:8.35:62,8,0	0/1:22,0:5:2.97:3,0,158	0/0:23,0:11:24.56:0,25,244	1/1:21,0:20:13.32:339,13,0	1/1:11,0:10:9.19:276,9,0	0/1:11,0:9:42.81:92,0,43	0/1:21,0:21:65.38:65,0,256	1/1:7,0:8:2.89:118,3,0	0/1:12,0:12:49.93:50,0,383	0/0:23,0:21:23.72:0,24,641	0/0:15,0:15:42.10:0,42,931	0/1:5,0:5:19.94:55,0,20	1/1:9,0:7:12.26:118,12,0	1/1:10,2:8:13.58:163,14,0	1/1:10,0:8:3.32:113,3,0	1/1:15,1:11:17.62:154,18,0	0/0:14,0:11:19.68:0,20,348	0/1:12,0:11:9.11:9,0,181	0/0:12,0:12:7.89:0,8,262	0/1:4,0:4:8.59:9,0,32	1/1:9,1:9:26.83:305,27,0	0/0:12,0:12:33.58:0,34,758	0/0:9,0:8:6.49:0,6,150	0/0:11,0:11:5.51:0,6,266	0/1:14,0:14:42.86:43,0,211	0/0:21,0:18:31.04:0,31,605	0/1:5,0:5:6.14:6,0,118
chr10	40622165	.	A	AGATC	13565.07	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-14.523;DP=636;FS=14.300;HRun=0;HaplotypeScore=119.0719;InbreedingCoeff=0.9904;MQ=90.85;MQ0=2;MQRankSum=-7.188;QD=56.29;ReadPosRankSum=-0.590;VQSLOD=5.1937;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,102,1858	1/1:2,7:9:21.07:553,21,0	0/0:23,0:23:66.22:0,66,1168	0/0:31,0:31:78.09:0,78,1323	0/0:20,0:20:54.17:0,54,939	0/0:19,0:19:54.19:0,54,993	0/0:27,0:27:63.20:0,63,1119	1/1:14,13:28:57.18:1423,57,0	0/0:24,0:24:63.20:0,63,1128	1/1:1,15:16:45.15:1149,45,0	1/1:1,12:13:30.10:790,30,0	0/0:32,0:32:87.30:0,87,1601	0/0:23,0:23:66.16:0,66,1146	0/0:27,0:27:69.24:0,69,1239	0/0:25,0:25:69.19:0,69,1205	0/0:21,0:21:63.20:0,63,1120	0/0:31,0:31:87.22:0,87,1496	1/1:4,29:34:75.22:1961,75,0	1/1:10,10:20:33.07:705,33,0	1/1:3,7:11:21.07:554,21,0	1/1:11,35:47:94.59:2439,95,0	0/0:12,0:12:33.11:0,33,599	0/0:13,0:13:39.12:0,39,687	0/0:31,0:31:87.30:0,87,1601	1/1:1,9:11:26.82:712,27,0	1/1:5,25:30:75.17:1855,75,0	1/1:0,18:17:45.15:1187,45,0	1/1:0,3:3:9.03:238,9,0
chr10	40622672	.	A	AT	6679.33	PASS	AB=1.000;AC=31;AF=0.554;AN=56;BaseQRankSum=-12.657;DP=607;FS=0.000;HRun=11;HaplotypeScore=59.5265;InbreedingCoeff=0.9490;MQ=67.00;MQ0=0;MQRankSum=0.247;QD=19.47;ReadPosRankSum=-1.674;VQSLOD=5.1875;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:43:99:0,106,796	1/1:1,9:10:18.03:183,18,0	0/0:16,0:14:17.45:0,17,114	0/1:16,0:11:1.08:1,0,45	0/0:29,1:30:47.20:0,47,541	1/1:4,21:25:33.88:525,34,0	1/1:4,15:19:42:413,42,0	1/1:9,15:24:42.06:413,42,0	1/1:8,23:31:39.89:585,40,0	1/1:8,21:29:59.94:556,60,0	1/1:7,13:20:12.79:295,13,0	0/0:19,0:19:44.74:0,45,340	0/0:22,0:22:65.69:0,66,500	0/0:24,0:24:47.74:0,48,369	0/0:22,0:24:64.73:0,65,483	0/0:14,0:13:31.89:0,32,236	0/0:30,0:30:89.59:0,90,687	1/1:4,12:16:44.89:414,45,0	1/1:8,17:26:38.01:471,38,0	1/1:3,11:14:33.03:322,33,0	1/1:4,6:10:15.03:152,15,0	0/0:7,0:7:17.91:0,18,137	0/0:8,0:8:20.92:0,21,162	0/0:26,0:26:65.68:0,66,504	1/1:1,16:17:42.08:426,42,0	1/1:6,27:34:80.96:795,81,0	1/1:3,28:31:54.87:726,55,0	1/1:3,18:21:21.85:403,22,0
chr10	40624484	.	T	TG	21907.13	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-1.147;DP=728;FS=1.495;HRun=0;HaplotypeScore=117.4651;InbreedingCoeff=0.9928;MQ=73.62;MQ0=1;MQRankSum=-5.915;QD=39.26;ReadPosRankSum=4.169;VQSLOD=4.5771;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,28:34:75.23:1171,75,0	1/1:2,11:13:36.11:551,36,0	0/0:34,0:32:66.35:0,66,1146	0/0:28,0:24:59.69:0,60,733	1/1:0,25:25:56.78:817,57,0	1/1:0,18:18:42.14:670,42,0	1/1:0,25:25:63.21:1005,63,0	1/1:0,32:32:96.30:1482,96,0	1/1:0,33:33:96.33:1533,96,0	1/1:1,27:28:78.26:1217,78,0	1/1:2,20:22:48.08:735,48,0	0/0:32,0:32:93.27:0,93,1237	1/1:5,19:24:69.19:1010,69,0	1/1:0,15:15:33.11:520,33,0	1/1:5,29:34:84.26:1285,84,0	1/1:4,26:30:78.23:1175,78,0	1/1:1,26:27:66.22:1032,66,0	1/1:0,19:19:48.16:758,48,0	1/1:2,15:17:45.14:666,45,0	1/1:2,27:29:72.23:1125,72,0	1/1:1,19:20:42.13:665,42,0	1/1:1,28:29:69.14:1045,69,0	0/0:29,0:28:81.18:0,81,1059	0/0:47,0:47:99:0,135,1770	1/1:1,29:30:69.24:1095,69,0	1/1:2,16:18:54.18:838,54,0	1/1:0,32:32:84.18:1322,84,0	1/1:0,4:4:12.04:191,12,0
chr10	40624528	.	CAAAT	C	19077.06	PASS	AB=1.000;AC=43;AF=0.768;AN=56;BaseQRankSum=5.279;DP=707;FS=1.474;HRun=0;HaplotypeScore=157.5325;InbreedingCoeff=0.6992;MQ=56.20;MQ0=4;MQRankSum=-6.383;QD=34.01;ReadPosRankSum=-0.811;VQSLOD=4.8506;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,35:44:65.36:1103,65,0	1/1:2,10:11:30.10:559,30,0	0/0:28,0:17:39.09:0,39,636	0/0:26,0:22:32.43:0,32,681	1/1:12,12:24:65.77:950,66,0	0/1:26,0:26:74.85:75,0,736	0/1:23,0:23:99:188,0,498	1/1:23,11:34:98.53:1262,99,0	0/1:29,0:29:99:141,0,739	1/1:8,13:21:62.96:969,63,0	1/1:8,9:17:48.11:760,48,0	0/0:29,0:29:87.16:0,87,1679	1/1:2,24:26:60.08:1079,60,0	1/1:2,15:16:33.11:622,33,0	1/1:5,33:38:81.25:1435,81,0	1/1:4,27:31:78.25:1398,78,0	1/1:17,6:23:53.34:745,53,0	1/1:14,5:19:50.75:570,51,0	1/1:13,7:20:57.09:847,57,0	1/1:7,21:28:79.93:1103,80,0	1/1:10,8:18:48.01:687,48,0	1/1:4,9:13:39.10:630,39,0	0/0:26,0:25:75.17:0,75,1652	0/0:34,0:34:96.18:0,96,2073	1/1:14,17:31:87.13:1319,87,0	1/1:1,26:27:77.99:1064,78,0	1/1:9,17:25:69.11:1051,69,0	1/1:2,12:14:30:520,30,0
chr10	40626979	.	C	CCTT	33745.38	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-12.393;DP=728;FS=2.772;HRun=0;HaplotypeScore=98.5134;InbreedingCoeff=0.9941;MQ=78.38;MQ0=1;MQRankSum=-9.760;QD=55.14;ReadPosRankSum=7.893;VQSLOD=6.7023;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,37:43:88.50:1958,89,0	1/1:0,8:10:24.08:556,24,0	0/0:62,0:47:99:0,132,1903	0/0:54,0:39:68.71:0,69,1227	1/1:0,21:21:54.07:1111,54,0	1/1:1,20:21:42.14:992,42,0	1/1:0,20:21:48.16:1134,48,0	1/1:0,25:27:81.25:1707,81,0	1/1:0,24:24:66.23:1559,66,0	1/1:0,19:19:57.20:1258,57,0	1/1:1,13:15:36.08:735,36,0	1/1:2,27:32:78.27:1843,78,0	1/1:1,29:30:72.01:1700,72,0	1/1:3,30:35:72.25:1685,72,0	1/1:4,24:29:63.21:1488,63,0	1/1:0,20:22:54.19:1276,54,0	1/1:3,33:39:81.28:1900,81,0	1/1:0,19:20:54.14:1183,54,0	1/1:1,22:24:66.22:1371,66,0	1/1:0,15:16:42.14:951,42,0	1/1:2,30:33:87.30:2043,87,0	1/1:1,15:18:42.14:971,42,0	1/1:0,16:16:29.98:709,30,0	1/1:0,15:17:36.12:849,36,0	1/1:0,18:18:51.18:1205,51,0	1/1:0,25:25:75.26:1740,75,0	1/1:0,24:25:60.21:1401,60,0	1/1:1,9:11:17.78:421,18,0
chr10	40627169	.	T	TTCGTGTTCTCTCTC	11169.62	PASS	AB=1.000;AC=35;AF=0.625;AN=56;BaseQRankSum=-8.209;DP=717;FS=29.413;HRun=0;HaplotypeScore=288.0510;InbreedingCoeff=0.1773;MQ=59.28;MQ0=13;MQRankSum=-0.040;QD=19.70;ReadPosRankSum=-4.884;VQSLOD=2.0561;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:40,0:40:33.57:637,34,0	0/1:13,0:13:26.23:26,0,72	0/0:29,0:18:47.33:0,47,942	0/0:32,0:16:39.11:0,39,760	1/1:27,0:27:26.88:550,27,0	1/1:22,0:22:52.73:1323,53,0	1/1:25,0:24:45.11:1126,45,0	1/1:35,0:35:0.98:160,1,0	1/1:28,0:27:36.57:765,37,0	0/1:30,0:30:57.84:58,0,414	0/1:18,0:18:99:170,0,361	0/1:22,0:22:23.96:24,0,494	1/1:31,0:29:75.06:1777,75,0	1/1:30,0:29:34.36:781,34,0	1/1:28,0:27:47.37:956,47,0	1/1:9,14:33:21.54:870,22,0	1/1:10,0:23:23.11:751,23,0	0/0:15,0:14:19.55:0,20,304	0/1:24,0:24:53.37:53,0,281	0/1:21,0:21:84.58:85,0,352	0/1:34,0:34:1.76:19,0,2	1/1:24,0:23:36.01:776,36,0	0/1:17,0:17:44.34:44,0,228	0/0:46,0:46:66.24:0,66,1520	0/1:20,0:20:99:195,0,281	0/1:13,0:13:17.48:17,0,197	0/0:28,0:28:29.45:0,29,698	0/1:8,0:7:6.29:6,0,47
chr10	40627171	.	C	CGTGT	7634.14	PASS	AB=0.732;AC=29;AF=0.518;AN=56;BaseQRankSum=-2.943;DP=694;FS=1.398;HRun=0;HaplotypeScore=209.5178;InbreedingCoeff=-0.3705;MQ=59.19;MQ0=14;MQRankSum=1.980;QD=12.68;ReadPosRankSum=-0.997;VQSLOD=4.2535;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:18,19:40:99:291,0,199	0/1:1,0:13:2.18:26,0,2	0/0:30,0:19:47.33:0,47,941	0/0:34,0:15:38.66:0,39,760	0/1:13,13:26:84.70:360,0,85	0/1:17,6:23:37.40:1066,0,37	0/1:19,5:23:15.38:883,0,15	1/1:31,0:32:38.17:195,38,0	0/1:16,15:30:28.90:638,0,29	0/1:25,0:28:17.42:100,0,17	0/1:2,0:17:42.69:213,0,43	0/1:14,0:22:41.68:43,0,42	0/1:23,6:27:69.54:1261,0,70	1/1:12,15:27:22.14:518,22,0	0/1:9,17:26:72.81:657,0,73	0/1:27,0:26:6.27:162,0,6	0/1:18,0:18:58.19:78,0,58	1/1:2,0:17:17.15:110,17,0	0/1:18,0:22:5.54:57,0,6	0/1:14,0:21:50.71:85,0,51	0/1:2,0:32:0.06:22,0,0	0/1:7,13:21:28.63:510,0,29	0/1:10,0:17:8.24:57,0,8	0/1:4,0:43:9.49:23,0,9	1/1:16,0:20:12.70:252,13,0	0/1:10,0:13:14.30:19,0,14	0/0:0,0:28:25.21:0,25,101	0/1:8,0:7:1.98:7,0,2
chr10	40627172	.	TCTC	T	2605.75	PASS	AB=0.926;AC=25;AF=0.446;AN=56;BaseQRankSum=6.990;DP=685;FS=8.775;HRun=0;HaplotypeScore=185.7543;InbreedingCoeff=-0.1907;MQ=58.94;MQ0=14;MQRankSum=-3.841;QD=5.07;ReadPosRankSum=-0.884;VQSLOD=1.5910;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:39,0:39:54.07:54,0,416	0/0:13,0:13:10.02:0,10,63	0/0:29,0:18:47.99:0,48,597	0/0:35,0:15:41.97:0,42,520	0/1:26,0:26:79.41:79,0,169	0/1:23,0:23:99:133,0,156	0/1:23,0:22:77.07:140,0,77	0/1:32,0:33:43.58:78,0,44	0/1:31,0:30:99:124,0,263	0/0:29,0:29:30.21:0,30,625	0/1:17,0:17:61.47:61,0,247	0/1:14,8:22:46.50:176,0,46	0/1:27,0:25:99:140,0,168	1/1:27,0:26:13.07:126,13,0	0/1:26,0:25:99:161,0,103	0/0:28,0:27:12.04:0,12,190	0/0:19,0:19:9.13:0,9,104	0/0:18,0:17:23.91:0,24,383	1/1:16,0:20:2.62:113,3,0	1/1:13,0:20:5.50:162,5,0	0/1:28,0:30:0.68:18,0,1	0/1:21,0:20:99:125,0,136	0/1:10,5:17:2.71:114,0,3	1/1:20,20:43:50.50:596,50,0	0/1:17,2:19:99:122,0,163	0/1:10,0:13:14.34:72,0,14	0/1:20,0:28:6.48:164,0,6	0/1:8,0:7:4.49:16,0,4
chr10	40630699	.	G	GTT	7765.37	PASS	AB=1.000;AC=45;AF=0.804;AN=56;BaseQRankSum=8.011;DP=569;FS=31.276;HRun=10;HaplotypeScore=178.0172;InbreedingCoeff=0.6270;MQ=53.40;MQ0=1;MQRankSum=-9.047;QD=16.04;ReadPosRankSum=-5.268;VQSLOD=-0.6797;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:20:20.01:234,20,0	1/1:4,0:4:6.02:82,6,0	0/1:18,0:18:8.40:8,0,230	0/0:8,0:6:15.02:0,15,147	1/1:30,0:37:35.55:385,36,0	1/1:16,1:24:32.86:333,33,0	1/1:14,0:18:10.80:148,11,0	1/1:26,11:35:77.82:916,78,0	1/1:19,0:23:25.19:268,25,0	1/1:32,4:36:59.94:620,60,0	1/1:19,3:22:41.93:439,42,0	0/0:23,0:25:53.55:0,54,511	0/1:17,0:17:28.93:32,0,29	0/1:14,0:14:15.96:20,0,16	1/1:16,0:20:20.25:158,20,0	1/1:15,0:16:9.19:171,9,0	1/1:21,2:24:22.88:241,23,0	1/1:13,4:16:32.78:413,33,0	1/1:16,0:15:25.86:281,26,0	1/1:12,5:18:50.06:564,50,0	1/1:4,4:8:14.95:169,15,0	1/1:11,0:15:9.01:218,9,0	0/0:25,0:25:44.76:0,45,508	0/0:26,0:26:54.03:0,54,536	1/1:8,3:14:40.78:428,41,0	1/1:20,4:25:33.76:590,34,0	1/1:22,5:30:65.99:811,66,0	1/1:6,1:7:18.05:236,18,0
chr10	40630717	.	TTG	T	1421.84	PASS	AB=0.926;AC=14;AF=0.250;AN=56;BaseQRankSum=-2.791;DP=545;FS=8.660;HRun=0;HaplotypeScore=181.1355;InbreedingCoeff=-0.1598;MQ=48.91;MQ0=3;MQRankSum=-2.043;QD=5.53;ReadPosRankSum=-6.117;VQSLOD=0.4466;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:8.87:0,9,100	0/1:2,1:3:26.50:27,0,27	0/0:18,0:13:32.10:0,32,444	0/0:11,0:9:19.26:0,19,232	0/0:37,0:37:35.87:0,36,370	0/0:21,0:21:27.03:0,27,110	0/0:15,0:15:18.09:0,18,98	0/1:37,6:39:99:277,0,151	0/1:16,0:16:7.81:8,0,31	0/1:30,2:31:99:162,0,124	0/1:18,2:20:70.93:139,0,71	0/0:21,0:21:60.20:0,60,1003	0/0:15,0:15:23.32:0,23,148	0/0:16,0:16:14.78:0,15,95	0/0:19,0:19:26.95:0,27,191	0/0:15,0:15:12.54:0,13,203	0/0:20,0:20:3.65:0,4,145	0/1:14,0:13:18.08:100,0,18	0/1:20,0:17:51.33:74,0,51	0/1:20,4:24:49.74:265,0,50	0/1:7,0:7:15.60:40,0,16	0/0:18,0:17:21.58:0,22,193	0/0:23,0:22:59.94:0,60,906	0/0:22,0:22:51.10:0,51,853	0/1:14,2:16:53.51:94,0,54	0/1:23,2:25:98.84:124,0,99	0/1:28,1:29:99:176,0,100	1/1:6,2:8:12.91:94,13,0
chr10	40630719	.	G	GTTGTTGT	21402.76	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=8.845;DP=568;FS=74.019;HRun=0;HaplotypeScore=163.2936;InbreedingCoeff=0.9670;MQ=51.72;MQ0=3;MQRankSum=-10.265;QD=45.34;ReadPosRankSum=-0.058;VQSLOD=2.0598;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,0:23:19.91:364,20,0	1/1:2,1:3:8.06:160,8,0	0/0:17,0:13:32.86:0,33,568	0/0:13,0:11:15.50:0,16,258	1/1:12,0:38:89.21:1575,89,0	1/1:6,15:21:42.06:1087,42,0	1/1:5,8:17:28.74:628,29,0	1/1:29,2:39:99:1554,101,0	1/1:2,12:19:21.07:659,21,0	1/1:14,10:32:84.21:2028,84,0	1/1:11,5:21:54.85:1234,55,0	0/0:20,0:20:60.20:0,60,1421	1/1:0,0:14:24.08:789,24,0	1/1:1,1:18:15.05:494,15,0	1/1:7,0:20:32.18:501,32,0	1/1:11,0:16:29.58:519,30,0	1/1:6,0:24:20.83:569,21,0	1/1:3,4:11:33.11:907,33,0	1/1:13,0:17:29.93:707,30,0	1/1:14,8:25:72.55:1502,73,0	1/1:6,0:7:13.82:140,14,0	1/1:3,0:18:35.11:854,35,0	0/0:23,0:22:57.15:0,57,1215	0/0:22,0:22:54.11:0,54,1253	1/1:7,6:17:48.16:1275,48,0	1/1:10,7:24:63.19:1524,63,0	1/1:13,12:30:75.23:1967,75,0	1/1:7,1:8:21.02:366,21,0
chr10	40630721	.	T	TG	5815.43	PASS	AB=0.895;AC=44;AF=0.786;AN=56;BaseQRankSum=11.846;DP=551;FS=49.914;HRun=0;HaplotypeScore=160.3466;InbreedingCoeff=0.6853;MQ=51.48;MQ0=3;MQRankSum=-12.105;QD=12.78;ReadPosRankSum=3.966;VQSLOD=3.5565;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:20,4:24:9.40:152,9,0	1/1:3,0:3:7.28:26,7,0	0/0:17,0:12:32.68:0,33,410	0/0:13,0:11:26.96:0,27,308	1/1:27,10:37:7.79:558,8,0	1/1:15,6:21:40.60:355,41,0	1/1:14,4:18:8.44:265,8,0	1/1:30,8:34:74.10:567,74,0	1/1:16,2:18:20.11:144,20,0	1/1:27,6:32:79.25:543,79,0	1/1:19,4:23:30.95:337,31,0	0/0:21,0:21:60.18:0,60,807	1/1:11,0:11:22.01:98,22,0	0/1:16,0:16:30.83:42,0,31	1/1:14,5:19:14.23:190,14,0	0/1:11,4:15:23.69:163,0,24	1/1:16,4:20:5.41:145,5,0	1/1:13,1:13:30.34:166,30,0	1/1:15,4:16:31.14:233,31,0	1/1:20,5:25:44.36:395,44,0	1/1:5,2:7:4.16:60,4,0	1/1:16,1:16:19.92:155,20,0	0/0:23,0:22:60.13:0,60,781	0/0:22,0:22:57.14:0,57,758	1/1:14,3:17:45.37:296,45,0	1/1:19,5:24:35.68:341,36,0	1/1:24,4:28:69.87:431,70,0	1/1:3,5:8:10.71:155,11,0
chr10	40630727	.	G	GT	4598.22	PASS	AB=1.000;AC=25;AF=0.446;AN=56;BaseQRankSum=2.759;DP=553;FS=30.756;HRun=9;HaplotypeScore=167.2381;InbreedingCoeff=0.8769;MQ=56.06;MQ0=2;MQRankSum=-7.646;QD=17.69;ReadPosRankSum=-2.327;VQSLOD=2.2585;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:15.72:0,16,174	1/1:1,2:3:9.02:99,9,0	0/0:17,0:14:26.97:0,27,230	0/0:16,0:14:20.72:0,21,215	0/0:35,0:35:27.79:0,28,249	0/0:19,0:19:13.32:0,13,43	0/1:18,0:18:19.35:19,0,47	1/1:16,22:34:66.16:712,66,0	0/0:18,0:18:14.38:0,14,79	1/1:16,17:32:66.16:710,66,0	1/1:9,13:22:44.88:436,45,0	0/0:20,0:20:44.95:0,45,388	0/0:11,0:11:28.25:0,28,155	0/0:13,0:13:20.02:0,20,119	0/0:18,0:18:10.84:0,11,61	0/0:14,0:14:23.51:0,24,163	0/0:24,0:24:28.48:0,28,199	1/1:3,13:15:25.31:265,25,0	1/1:18,1:17:11.41:112,11,0	1/1:7,18:25:52.02:552,52,0	1/1:4,1:5:6.02:63,6,0	0/0:16,0:15:22.18:0,22,111	0/0:25,0:24:68.92:0,69,583	0/0:22,0:22:56.94:0,57,486	1/1:5,12:17:33.43:330,33,0	1/1:11,14:25:54.14:583,54,0	1/1:6,25:31:57.41:618,57,0	1/1:5,3:8:9.02:99,9,0
chr10	40631898	.	GTA	G	2843.49	PASS	AB=0.992;AC=35;AF=0.700;AN=50;BaseQRankSum=-0.626;DP=541;FS=8.430;HRun=0;HaplotypeScore=91.2431;InbreedingCoeff=-0.2113;MQ=37.93;MQ0=37;MQRankSum=2.106;QD=5.78;ReadPosRankSum=-4.543;VQSLOD=-0.0425;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:11:2.18:0,2,7	0/1:10,0:9:15.89:60,0,16	./.	./.	1/1:5,0:5:5.98:47,6,0	1/1:5,0:4:0.47:1,0,0	./.	0/1:15,0:5:14.02:33,0,14	1/1:0,0:1:2.60:10,3,0	0/1:33,0:25:96.24:297,0,96	1/1:26,0:25:8.96:69,9,0	0/1:36,1:36:54.08:293,0,54	1/1:16,0:15:30.97:197,31,0	1/1:12,0:9:5.55:89,6,0	1/1:8,0:7:2.74:12,3,0	0/0:11,0:7:0.89:0,1,2	1/1:14,0:7:9.26:54,9,0	1/1:26,0:23:16.93:323,17,0	0/1:13,0:6:0.96:94,0,1	0/1:23,0:19:22.42:133,0,22	1/1:57,0:38:37.10:269,37,0	1/1:4,0:2:3.47:26,3,0	0/1:25,1:25:68.73:159,0,69	0/1:40,1:37:74.30:74,0,104	1/1:34,2:31:32.54:272,33,0	0/1:37,0:31:85.77:330,0,86	0/1:33,0:30:40.29:40,0,45	0/1:13,0:13:30.79:98,0,31
chr10	40631900	.	A	ATG	1162.61	PASS	AB=1.000;AC=34;AF=0.680;AN=50;BaseQRankSum=0.591;DP=545;FS=0.961;HRun=0;HaplotypeScore=102.1873;InbreedingCoeff=0.2688;MQ=38.34;MQ0=34;MQRankSum=-3.300;QD=2.86;ReadPosRankSum=1.579;VQSLOD=2.2910;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:15,0:12:0.13:0,0,0	1/1:9,2:10:6.02:94,6,0	./.	./.	0/0:5,0:5:0.47:0,0,1	0/1:6,0:5:0:0,0,0	./.	0/1:13,0:4:25.47:81,0,25	1/1:2,0:2:0.89:2,1,0	1/1:33,2:27:2.67:105,3,0	0/0:15,12:26:1.24:0,1,3	0/1:37,0:36:33.68:34,0,161	1/1:16,0:15:8.38:46,8,0	1/1:11,0:8:0.47:1,0,0	1/1:7,0:7:2.22:7,2,0	1/1:11,0:7:2.92:18,3,0	0/0:14,0:7:0.21:0,0,9	1/1:27,0:24:10.57:93,11,0	1/1:14,1:6:1.25:3,1,0	0/1:23,0:19:26.65:112,0,27	1/1:52,2:38:11.23:131,11,0	0/1:4,0:2:0:0,0,0	0/0:26,0:25:1.70:0,2,198	0/0:42,0:38:23.76:0,24,257	1/1:34,2:31:9.33:76,9,0	1/1:32,2:31:26.42:273,26,0	1/1:16,17:30:10.97:115,11,0	1/1:6,10:14:5.96:93,6,0
chr10	40631934	.	GTA	G	184.35	PASS	AB=0.812;AC=6;AF=0.111;AN=54;BaseQRankSum=3.825;DP=504;FS=1.143;HRun=0;HaplotypeScore=77.2409;InbreedingCoeff=0.1017;MQ=43.61;MQ0=40;MQRankSum=-2.164;QD=3.48;ReadPosRankSum=-1.264;VQSLOD=1.9631;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:13,7:12:8.99:0,9,159	0/0:5,0:5:11.40:0,11,181	./.	0/0:37,0:1:3.01:0,3,48	0/1:9,4:13:64.69:65,0,377	0/0:10,0:8:18.06:0,18,347	0/0:13,0:9:9.03:0,9,174	0/0:29,0:22:66.22:0,66,1222	0/0:4,0:4:8.65:0,9,173	0/0:25,0:20:60.16:0,60,1087	0/0:15,0:14:15.05:0,15,289	0/0:19,0:18:45.10:0,45,797	0/1:7,2:9:44.16:84,0,44	0/1:4,2:3:39.87:40,0,51	0/1:10,1:9:24.83:25,0,207	0/0:10,3:10:12.04:0,12,230	1/1:13,1:7:6.02:91,6,0	0/0:23,0:20:36.08:0,36,639	0/0:10,0:7:3.23:0,3,330	0/0:16,0:13:30.10:0,30,557	0/0:36,0:29:39.06:0,39,718	0/0:9,0:7:18.06:0,18,347	0/0:16,0:15:37:0,37,664	0/0:42,0:37:57.15:0,57,1012	0/0:25,0:23:45.15:0,45,869	0/0:25,0:21:55.74:0,56,1038	0/0:27,0:26:5.26:0,5,373	0/0:18,0:16:27.09:0,27,520
chr10	40631994	.	C	CGT	899.37	PASS	AB=0.906;AC=22;AF=0.500;AN=44;BaseQRankSum=0.747;DP=619;FS=3.117;HRun=0;HaplotypeScore=75.9348;InbreedingCoeff=0.0584;MQ=40.22;MQ0=79;MQRankSum=0.039;QD=2.75;ReadPosRankSum=-2.977;VQSLOD=1.1668;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/1:11,0:10:23.84:48,0,24	./.	./.	./.	0/1:11,0:15:3.46:48,0,3	0/1:22,0:18:22.44:22,0,40	0/0:17,0:11:0:0,0,0	0/1:13,0:18:35.45:44,0,35	1/1:28,0:20:12.02:139,12,0	1/1:21,1:19:6.02:87,6,0	0/1:9,13:22:20.81:123,0,21	0/1:4,0:2:0:0,0,0	1/1:14,0:9:5.88:43,6,0	./.	0/1:19,0:19:41.84:42,0,65	0/1:17,0:10:0:0,0,0	0/1:20,11:24:27.16:221,0,27	./.	0/0:17,0:15:6.01:0,6,66	0/0:57,0:51:41.17:0,41,391	1/1:19,1:18:6.01:69,6,0	1/1:13,0:12:3.01:43,3,0	0/1:26,17:38:35.88:36,0,44	1/1:20,0:17:6:73,6,0	0/0:31,0:22:11.58:0,12,81	0/0:15,0:13:10.29:0,10,128	0/0:13,0:11:8.75:0,9,80
chr10	40632031	.	G	GTA	423.05	PASS	AB=0.931;AC=14;AF=0.269;AN=52;BaseQRankSum=7.978;DP=634;FS=25.547;HRun=0;HaplotypeScore=98.0377;InbreedingCoeff=0.2995;MQ=46.19;MQ0=31;MQRankSum=2.394;QD=1.74;ReadPosRankSum=4.308;VQSLOD=0.1667;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:23:5.96:0,6,44	0/0:14,0:14:14.81:0,15,176	./.	0/0:9,0:3:2.97:0,3,20	./.	1/1:18,0:17:22.68:223,23,0	0/1:11,26:34:15.56:54,0,16	0/0:27,0:19:27.48:0,27,335	1/1:11,20:29:16.72:152,17,0	0/0:27,0:24:22.49:0,22,412	0/1:19,0:18:20.59:21,0,117	0/1:27,0:27:23.81:24,0,199	0/0:9,0:5:2.92:0,3,17	1/1:18,0:14:0.76:7,1,0	0/0:20,0:17:5.99:0,6,48	0/1:22,0:22:2.03:2,0,124	0/1:19,0:17:0:0,0,0	0/1:28,0:22:54.65:55,0,213	0/0:13,0:4:8.94:0,9,68	0/0:18,0:18:41.93:0,42,378	0/0:70,0:70:99:0,134,1306	1/1:23,0:22:5.22:33,5,0	0/0:19,0:19:7.68:0,8,168	0/0:41,0:33:19.05:0,19,308	0/0:19,0:17:2.23:0,2,152	0/0:26,0:25:55.24:0,55,492	0/0:20,0:17:32.92:0,33,341	0/0:8,0:8:17.93:0,18,177
chr10	40632033	.	GTA	G	97.96	PASS	AB=0.971;AC=9;AF=0.188;AN=48;BaseQRankSum=6.000;DP=606;FS=12.819;HRun=0;HaplotypeScore=93.1012;InbreedingCoeff=0.3954;MQ=46.22;MQ0=31;MQRankSum=-1.800;QD=0.80;ReadPosRankSum=0.954;VQSLOD=1.0744;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	0/0:14,0:14:30.02:0,30,350	./.	0/0:8,0:3:2.90:0,3,16	./.	0/0:17,0:16:18.12:0,18,180	0/0:39,0:36:10.32:0,10,103	0/0:27,0:19:50.67:0,51,409	0/1:32,0:29:14.80:15,0,55	0/0:25,0:22:50.04:0,50,541	0/1:19,0:18:7.83:8,0,220	0/0:24,0:24:35.89:0,36,387	1/1:9,0:5:2.60:10,3,0	1/1:18,1:15:6.01:62,6,0	./.	0/1:19,2:21:65:65,0,83	0/0:20,0:18:0:0,0,1	0/0:24,1:21:44.92:0,45,456	0/0:13,0:4:8.45:0,8,52	0/0:18,0:18:42.02:0,42,494	0/0:68,0:67:99:0,110,1327	1/1:20,2:21:6.01:63,6,0	0/0:18,0:18:26.81:0,27,285	0/0:38,0:32:20.04:0,20,376	0/0:20,1:19:14.11:0,14,302	0/0:21,0:20:53.12:0,53,621	0/0:20,0:17:29.70:0,30,353	0/0:8,0:8:6.57:0,7,216
chr10	40632045	.	GCATGCATGCATGTA	G	694.68	PASS	AC=8;AF=0.167;AN=48;BaseQRankSum=4.670;DP=558;FS=26.292;HRun=0;HaplotypeScore=166.4586;InbreedingCoeff=0.8163;MQ=53.42;MQ0=16;MQRankSum=-4.649;QD=10.37;ReadPosRankSum=2.225;VQSLOD=0.7252;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:14,0:14:36.12:0,36,2369	0/0:6,0:3:9.03:0,9,192	0/0:9,0:6:7.11:0,7,47	./.	0/0:19,0:18:39.07:0,39,2129	0/0:42,0:40:35.95:0,36,1880	0/0:35,0:30:81.28:0,81,4334	0/0:32,0:29:24.08:0,24,1064	0/0:20,0:20:60.21:0,60,3855	0/0:16,0:16:33.11:0,33,1872	0/0:23,0:23:45.15:0,45,2666	1/1:3,6:6:3.01:132,3,0	1/1:6,11:15:6.02:176,6,0	./.	1/1:3,17:20:9.03:304,9,0	./.	0/0:21,0:19:51.18:0,51,3151	0/0:12,0:9:24.08:0,24,1203	0/0:15,0:15:42.14:0,42,2758	0/0:58,0:58:99:0,126,7567	1/1:2,18:20:6.02:210,6,0	0/0:17,0:17:33.11:0,33,2119	0/0:31,0:31:60.21:0,60,3600	0/0:19,0:19:39.13:0,39,2366	0/0:16,0:15:45.15:0,45,2837	0/0:18,0:17:36.05:0,36,1779	0/0:5,0:5:15.05:0,15,949
chr10	40632049	.	GCATGCATGTA	G	627.21	PASS	AC=8;AF=0.167;AN=48;BaseQRankSum=5.066;DP=561;FS=24.594;HRun=0;HaplotypeScore=143.0513;InbreedingCoeff=0.8496;MQ=54.91;MQ0=11;MQRankSum=-4.977;QD=9.50;ReadPosRankSum=1.799;VQSLOD=1.1376;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:14,0:14:36.12:0,36,1823	0/0:10,0:6:17.85:0,18,244	0/0:16,0:11:14:0,14,319	./.	0/0:16,0:15:36.06:0,36,1535	0/0:43,0:41:45.15:0,45,1469	0/0:37,0:33:96.27:0,96,3424	0/0:30,0:28:24.08:0,24,819	0/0:22,0:22:66.23:0,66,2983	0/0:15,0:15:33.11:0,33,1402	0/0:22,0:22:45.15:0,45,1999	1/1:7,1:6:3.01:96,3,0	1/1:17,1:15:6.02:175,6,0	./.	1/1:17,3:20:9.03:303,9,0	./.	0/0:23,0:22:63.22:0,63,2598	0/0:11,0:9:24.08:0,24,861	0/0:13,0:13:39.13:0,39,2079	0/0:58,0:58:99:0,132,5843	1/1:19,1:20:6.02:181,6,0	0/0:16,0:16:33.11:0,33,1606	0/0:31,0:30:60.21:0,60,2687	0/0:18,0:18:42.14:0,42,1818	0/0:16,0:16:48.16:0,48,2218	0/0:16,0:15:36.12:0,36,1363	0/0:6,0:6:18.06:0,18,788
chr10	40632336	.	C	CT	6291.39	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=-5.494;DP=652;FS=2.325;HRun=10;HaplotypeScore=97.9867;InbreedingCoeff=0.9309;MQ=79.06;MQ0=0;MQRankSum=0.033;QD=21.69;ReadPosRankSum=0.128;VQSLOD=5.0205;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,31:37:79.08:833,79,0	0/0:7,0:8:17.02:0,17,129	0/0:17,0:17:3.23:0,3,185	0/1:18,0:19:0.89:1,0,106	1/1:3,16:19:33.08:352,33,0	1/1:3,14:18:35.92:366,36,0	1/1:6,21:27:54.10:563,54,0	0/0:28,0:29:55.92:0,56,447	1/1:2,17:19:48.12:512,48,0	0/0:34,0:34:89.86:0,90,737	0/0:15,0:15:35.81:0,36,292	0/0:31,0:31:83.16:0,83,685	1/1:2,18:20:54.61:577,55,0	1/1:1,24:25:69.17:735,69,0	1/1:6,22:28:41.52:647,42,0	1/1:4,14:18:20.48:423,20,0	1/1:6,29:35:50.55:743,51,0	0/0:25,0:27:69.99:0,70,554	0/0:14,0:15:28.98:0,29,224	0/0:17,0:17:38.94:0,39,319	0/0:20,0:21:49.98:0,50,400	1/1:3,20:24:52.01:539,52,0	0/0:22,0:23:55.97:0,56,449	0/0:34,0:35:97.86:0,98,784	0/0:12,0:14:33.04:0,33,236	0/0:39,0:39:80.82:0,81,663	0/0:29,0:29:74.74:0,75,602	0/0:5,0:5:14.98:0,15,123
chr10	40632750	.	T	TG	10658.61	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-15.737;DP=749;FS=5.172;HRun=6;HaplotypeScore=77.1162;InbreedingCoeff=0.9996;MQ=88.04;MQ0=0;MQRankSum=-3.071;QD=32.10;ReadPosRankSum=3.904;VQSLOD=5.1692;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,44:48:99:1565,126,0	0/0:10,0:10:27.06:0,27,275	0/0:25,0:25:49.71:0,50,542	0/0:30,0:30:72.10:0,72,715	1/1:3,16:19:39.04:470,39,0	1/1:1,24:25:69.22:867,69,0	1/1:2,30:32:81.26:1019,81,0	0/0:30,0:30:84.18:0,84,853	1/1:3,21:24:63.20:791,63,0	0/0:28,0:28:66.13:0,66,667	0/0:15,0:15:33.06:0,33,336	0/0:24,0:24:66.14:0,66,673	1/1:2,32:34:78.25:981,78,0	1/1:2,28:30:81.26:1019,81,0	1/1:0,25:25:72.23:906,72,0	1/1:1,24:25:66.21:830,66,0	1/1:3,39:42:99:1396,111,0	0/0:22,0:22:66.14:0,66,667	0/0:24,0:24:57.07:0,57,561	0/0:25,0:25:67.91:0,68,671	0/0:43,0:43:99:0,123,1247	1/1:1,27:28:71.94:814,72,0	0/0:18,0:18:47.90:0,48,472	0/0:24,0:24:29.28:0,29,606	0/0:29,0:29:66.10:0,66,658	0/0:32,0:32:87.19:0,87,882	0/0:28,0:28:75.17:0,75,764	0/0:10,0:10:27.06:0,27,275
chr10	40633032	.	T	TGGCAGGCATGTC	36412.42	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=7.762;DP=809;FS=3.054;HRun=0;HaplotypeScore=254.6577;InbreedingCoeff=0.9955;MQ=81.60;MQ0=0;MQRankSum=-20.116;QD=100.59;ReadPosRankSum=3.151;VQSLOD=4.8661;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,18:38:60.21:3605,60,0	0/0:13,0:13:36.12:0,36,1327	0/0:26,0:26:68.34:0,68,2076	0/0:28,0:28:78.16:0,78,2300	1/1:4,7:23:12.04:593,12,0	1/1:9,14:31:51.18:2849,51,0	1/1:14,13:34:60.21:3327,60,0	0/0:31,0:31:93.30:0,93,3178	1/1:4,18:34:65.78:3972,66,0	0/0:21,0:21:63.20:0,63,2122	0/0:28,0:28:81.25:0,81,2759	0/0:38,0:38:99:0,111,3742	1/1:7,8:25:45.15:2642,45,0	1/1:10,18:36:81.28:4566,81,0	1/1:10,25:45:99:5871,99,0	1/1:3,21:34:72.25:4329,72,0	1/1:13,6:28:42.14:2176,42,0	0/0:27,0:27:81.28:0,81,3006	0/0:28,0:28:78.26:0,78,2757	0/0:37,0:37:99:0,105,3879	0/0:47,0:47:99:0,135,4586	1/1:8,15:34:45.15:2482,45,0	0/0:14,0:14:41.98:0,42,1311	0/0:25,0:25:66.21:0,66,2322	0/0:18,0:18:54.17:0,54,1846	0/0:30,0:30:87.27:0,87,2996	0/0:21,0:21:63.17:0,63,2175	0/0:15,0:15:39.13:0,39,1483
chr10	40633352	.	T	TG	5826.66	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-7.420;DP=568;FS=3.018;HRun=7;HaplotypeScore=58.4372;InbreedingCoeff=0.9955;MQ=88.50;MQ0=0;MQRankSum=-3.768;QD=28.56;ReadPosRankSum=2.433;VQSLOD=5.6843;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,43:45:99:1341,111,0	0/0:10,0:10:30.05:0,30,290	0/0:27,0:27:66.05:0,66,618	0/0:15,0:15:18.48:0,18,300	1/1:1,18:19:51.15:610,51,0	1/1:3,13:16:36.11:435,36,0	1/1:3,12:15:21.06:254,21,0	0/0:23,0:23:47.86:0,48,463	1/1:2,25:27:66.20:797,66,0	0/0:20,0:20:54.06:0,54,515	0/0:15,0:15:45.07:0,45,432	0/0:23,0:23:57.07:0,57,544	0/0:22,0:22:57.09:0,57,550	0/0:23,0:23:66.10:0,66,635	1/1:0,21:21:54.17:652,54,0	1/1:2,13:15:30.09:362,30,0	1/1:3,28:31:72.22:870,72,0	0/0:18,0:18:54.09:0,54,521	0/0:21,0:21:51.07:0,51,492	0/0:22,0:22:63.10:0,63,607	0/0:20,0:20:57.09:0,57,550	1/1:1,14:15:42.13:506,42,0	0/0:14,0:14:39.06:0,39,376	0/0:19,0:19:51.04:0,51,484	0/0:14,0:14:36.06:0,36,348	0/0:27,0:27:75.11:0,75,720	0/0:24,0:24:66.10:0,66,637	0/0:7,0:7:15.01:0,15,145
chr10	40633519	.	CT	C	3775.96	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=11.383;DP=654;FS=0.000;HRun=2;HaplotypeScore=60.9419;InbreedingCoeff=0.9999;MQ=88.97;MQ0=0;MQRankSum=-2.832;QD=40.17;ReadPosRankSum=2.272;VQSLOD=3.8815;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,147,2309	0/0:12,0:12:36.12:0,36,574	0/0:25,0:25:75.23:0,75,1164	0/0:22,0:22:54.24:0,54,839	0/0:33,0:33:99:0,99,1557	1/1:0,19:19:54.18:755,54,0	1/1:0,22:22:66.22:923,66,0	0/0:32,0:32:96.32:0,96,1514	1/1:0,19:19:54.18:755,54,0	0/0:37,0:37:99:0,111,1775	0/0:24,0:24:72.25:0,72,1147	0/0:17,0:17:51.16:0,51,792	1/1:0,14:14:36.12:504,36,0	1/1:0,20:20:60.20:838,60,0	0/0:20,0:20:60.20:0,60,957	0/0:15,0:15:45.15:0,45,717	0/0:37,0:37:99:0,111,1769	0/0:20,0:20:60.20:0,60,959	0/0:24,0:24:72.25:0,72,1147	0/0:26,0:26:72:0,72,1151	0/0:18,0:18:54.17:0,54,839	0/0:24,0:24:69.19:0,69,1034	0/0:22,0:22:63.21:0,63,1007	0/0:11,0:11:33.11:0,33,528	0/0:23,0:23:69.24:0,69,1101	0/0:29,0:29:87.30:0,87,1392	0/0:25,0:25:75.26:0,75,1197	0/0:14,0:14:42.14:0,42,671
chr10	40633919	.	T	TTTTA	6601.71	PASS	AB=0.550;AC=15;AF=0.268;AN=56;BaseQRankSum=-10.253;DP=613;FS=0.893;HRun=0;HaplotypeScore=86.2917;InbreedingCoeff=0.9278;MQ=70.81;MQ0=0;MQRankSum=1.208;QD=36.47;ReadPosRankSum=-0.551;VQSLOD=4.8340;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,29:35:60.20:1456,60,0	0/0:19,0:19:45.01:0,45,548	0/0:20,0:17:12.02:0,12,152	0/0:11,0:11:19.51:0,20,224	1/1:5,21:27:66.02:1341,66,0	0/0:17,0:17:36.10:0,36,555	0/0:28,0:28:44.97:0,45,586	0/0:33,0:33:63:0,63,705	0/0:18,0:18:48.08:0,48,669	0/0:26,0:26:60.15:0,60,830	0/0:21,0:21:54.11:0,54,774	0/0:25,0:25:75.21:0,75,1179	0/1:4,17:22:2.73:1075,0,3	1/1:4,13:19:24.08:599,24,0	1/1:6,23:29:36.12:899,36,0	1/1:3,11:14:12.04:300,12,0	1/1:4,19:24:27.01:616,27,0	0/0:23,0:23:51.09:0,51,755	0/0:22,0:22:39.07:0,39,510	0/0:21,0:20:35.83:0,36,546	0/0:18,0:18:45.07:0,45,607	1/1:5,6:11:17.97:315,18,0	0/0:19,0:19:35.99:0,36,467	0/0:20,0:20:45.10:0,45,644	0/0:18,0:18:53.98:0,54,751	0/0:32,0:32:72.16:0,72,1020	0/0:24,0:24:48.05:0,48,672	0/0:17,0:17:38.99:0,39,445
chr10	40634216	.	TGA	T	8355.30	PASS	AB=0.716;AC=41;AF=0.732;AN=56;BaseQRankSum=-5.630;DP=596;FS=7.258;HRun=0;HaplotypeScore=105.9378;InbreedingCoeff=0.2147;MQ=70.38;MQ0=3;MQRankSum=1.674;QD=16.38;ReadPosRankSum=3.246;VQSLOD=4.0660;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,18:24:36.11:440,36,0	1/1:0,11:12:20.90:234,21,0	0/0:33,0:21:13.01:0,13,185	0/0:36,0:25:18.82:0,19,150	1/1:2,15:18:32.91:321,33,0	0/1:22,0:22:4.41:4,0,337	0/1:26,0:26:89.42:89,0,268	0/1:10,12:22:13.43:382,0,13	0/0:15,0:15:33.50:0,34,420	1/1:8,17:25:50.35:576,50,0	0/1:10,15:25:51.21:313,0,51	0/1:4,16:20:12.97:367,0,13	0/1:17,1:18:69.39:106,0,69	1/1:24,1:25:5.76:266,6,0	1/1:4,20:24:45.14:544,45,0	0/1:4,15:20:3.96:412,0,4	1/1:5,17:22:36.11:437,36,0	1/1:4,20:24:42.13:513,42,0	1/1:6,12:17:39.11:453,39,0	0/1:2,12:14:18.71:246,0,19	1/1:7,15:22:30.09:365,30,0	1/1:6,14:20:23.95:256,24,0	1/1:4,9:13:2.55:36,3,0	1/1:3,13:16:24.07:293,24,0	1/1:4,13:18:23.91:270,24,0	1/1:6,23:29:68.98:789,69,0	0/1:7,20:27:2.14:460,0,2	1/1:1,5:6:15.05:183,15,0
chr10	40634233	.	GAA	G	2226.31	PASS	AB=0.990;AC=26;AF=0.464;AN=56;BaseQRankSum=4.685;DP=611;FS=5.560;HRun=3;HaplotypeScore=126.4467;InbreedingCoeff=-0.7765;MQ=66.05;MQ0=9;MQRankSum=-0.072;QD=4.22;ReadPosRankSum=8.307;VQSLOD=-0.5875;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:25:76.84:77,0,105	0/1:13,0:13:9.43:39,0,9	0/0:37,0:14:24.32:0,24,234	0/0:34,0:16:2.39:0,2,128	0/1:24,0:24:19.31:19,0,166	0/1:17,1:18:92.09:199,0,92	0/1:21,4:25:60.65:354,0,61	0/1:20,0:19:70.29:70,0,77	0/1:16,0:16:65.91:66,0,127	0/1:21,0:21:49.78:102,0,50	0/1:20,0:20:63.60:64,0,108	0/1:24,0:24:68.22:68,0,153	0/1:21,0:21:64.16:64,0,109	0/1:29,0:29:75.21:121,0,75	0/1:24,0:24:33.96:120,0,34	1/1:17,0:17:6.49:104,6,0	0/1:23,0:23:56.20:97,0,56	0/1:24,0:24:52.93:116,0,53	0/1:18,1:18:50.34:135,0,50	0/1:15,0:15:50.40:50,0,102	0/1:26,0:26:76.53:77,0,164	0/1:20,0:20:22.09:22,0,136	0/0:13,0:13:2.10:0,2,69	0/1:18,0:18:60.74:61,0,98	0/1:18,0:18:32.60:33,0,73	0/1:31,0:31:99:169,0,112	0/1:28,0:27:99:117,0,99	0/1:8,0:8:34.81:35,0,51
chr10	40635097	.	TGATG	T	8496.54	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=11.699;DP=675;FS=8.183;HRun=0;HaplotypeScore=118.2914;InbreedingCoeff=0.9892;MQ=60.12;MQ0=8;MQRankSum=-0.679;QD=25.67;ReadPosRankSum=3.151;VQSLOD=4.3960;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:31:69.12:0,69,1497	1/1:1,6:7:18.06:294,18,0	0/0:36,0:29:60.15:0,60,1267	0/0:37,0:34:40.69:0,41,904	0/0:15,0:15:33.11:0,33,792	0/0:19,0:19:54.19:0,54,1309	0/0:28,0:28:42.11:0,42,908	1/1:19,21:38:60.12:891,60,0	0/0:31,1:32:28.93:0,29,1662	1/1:8,15:22:43.37:681,43,0	1/1:1,9:10:9.03:145,9,0	1/1:14,21:35:57.19:934,57,0	0/0:28,0:28:60.17:0,60,1287	0/0:29,0:29:75.24:0,75,1744	0/0:19,0:19:40.95:0,41,896	0/0:19,0:19:51.18:0,51,1240	0/0:31,0:31:66.22:0,66,1537	1/1:13,19:31:51.17:838,51,0	1/1:6,11:16:33.07:489,33,0	1/1:9,10:19:24.08:393,24,0	1/1:11,13:22:30.10:493,30,0	0/0:17,0:16:36.12:0,36,854	1/1:8,13:21:36.12:577,36,0	1/1:10,21:31:45.12:740,45,0	1/1:5,20:25:54.18:887,54,0	1/1:6,9:15:24.08:394,24,0	1/1:3,11:14:24.08:393,24,0	1/1:5,13:17:21.07:346,21,0
chr10	40635795	.	G	GT	14597.25	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-10.343;DP=534;FS=4.670;HRun=5;HaplotypeScore=45.5626;InbreedingCoeff=0.9616;MQ=79.40;MQ0=0;MQRankSum=-3.648;QD=32.22;ReadPosRankSum=0.442;VQSLOD=5.2158;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,21:24:54.18:710,54,0	1/1:0,12:12:30.01:372,30,0	0/0:13,0:13:21.01:0,21,206	0/0:15,0:15:4.05:0,4,238	1/1:5,24:29:72.15:908,72,0	1/1:3,25:28:75.23:973,75,0	1/1:0,9:9:21.07:276,21,0	1/1:8,29:37:87.27:1129,87,0	1/1:0,15:15:42.14:553,42,0	1/1:3,29:32:87.22:1108,87,0	1/1:1,15:16:45.15:592,45,0	0/0:10,0:10:27.03:0,27,273	1/1:0,14:14:39.13:513,39,0	1/1:1,10:11:27.09:355,27,0	1/1:1,18:19:51.17:671,51,0	1/1:4,13:17:36.12:474,36,0	1/1:1,17:18:42.14:553,42,0	1/1:1,18:19:48.16:631,48,0	1/1:5,18:23:54.09:633,54,0	1/1:4,22:26:63.20:825,63,0	1/1:2,9:11:24.08:316,24,0	1/1:1,14:15:39.13:513,39,0	0/0:23,0:23:60.15:0,60,645	0/0:20,0:20:54.13:0,54,580	1/1:2,13:15:33.11:434,33,0	1/1:3,19:22:60.17:755,60,0	1/1:3,28:30:69.22:908,69,0	1/1:0,10:10:30.10:395,30,0
chr10	40636244	.	AT	A	5141.82	PASS	AB=0.740;AC=22;AF=0.393;AN=56;BaseQRankSum=13.897;DP=586;FS=1.095;HRun=10;HaplotypeScore=63.5657;InbreedingCoeff=0.8341;MQ=68.10;MQ0=3;MQRankSum=-0.071;QD=19.85;ReadPosRankSum=2.893;VQSLOD=5.7609;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,27:28:77.98:677,78,0	0/0:4,0:4:9.02:0,9,100	0/0:28,0:12:20.52:0,21,190	0/0:17,0:12:3.86:0,4,154	1/1:3,13:16:35.98:312,36,0	1/1:0,18:18:50.99:443,51,0	1/1:2,18:20:47.99:417,48,0	0/0:42,1:43:99:0,99,1094	1/1:4,28:32:83.97:729,84,0	0/0:25,0:25:60.15:0,60,652	0/0:27,0:27:72.19:0,72,790	0/0:19,0:19:54.15:0,54,597	1/1:2,12:14:35.99:312,36,0	1/1:2,20:22:50.99:443,51,0	1/1:1,26:27:71.97:625,72,0	1/1:3,21:24:47.97:417,48,0	1/1:1,29:30:71.98:625,72,0	0/0:15,0:15:36.02:0,36,357	0/1:18,2:20:6.99:7,0,385	0/0:28,0:28:78.14:0,78,830	0/0:12,0:12:33.08:0,33,357	0/1:2,6:8:12.19:135,0,12	0/0:20,0:22:59.83:0,60,626	0/0:20,1:21:14.53:0,15,469	0/0:17,0:17:47.96:0,48,512	0/0:22,0:22:63.17:0,63,696	0/0:17,0:17:39.09:0,39,422	0/0:9,0:9:24.06:0,24,265
chr10	40636529	.	A	AG	4557.96	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=18.880;DP=630;FS=4.899;HRun=0;HaplotypeScore=153.9192;InbreedingCoeff=0.9875;MQ=61.95;MQ0=0;MQRankSum=-16.833;QD=18.68;ReadPosRankSum=0.700;VQSLOD=6.3646;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,23:32:37.05:403,37,0	0/0:6,0:6:17.97:0,18,226	0/0:7,0:7:21.07:0,21,294	0/0:16,0:16:36.12:0,36,494	1/1:3,9:12:8.63:73,9,0	1/1:2,18:20:54.41:446,54,0	1/1:5,15:20:46.85:391,47,0	0/0:23,0:23:66.22:0,66,923	1/1:7,17:24:50.99:439,51,0	0/0:21,0:21:63.20:0,63,862	0/0:9,0:9:24.08:0,24,335	0/0:21,0:21:63.21:0,63,877	1/1:6,28:34:92.80:779,93,0	1/1:7,14:21:53.26:463,53,0	1/1:2,16:18:43.86:376,44,0	1/1:3,24:27:73.21:622,73,0	1/1:8,18:26:39.61:417,40,0	0/0:23,0:23:69.20:0,69,944	0/0:34,0:34:99:0,102,1361	0/0:14,0:14:33.09:0,33,459	0/0:76,0:76:99:0,229,3111	1/1:4,6:10:17.71:148,18,0	0/0:19,0:19:54.09:0,54,729	0/0:36,0:36:99:0,102,1370	0/0:16,0:16:45.14:0,45,611	0/0:25,0:25:69.23:0,69,956	0/0:30,0:30:90.30:0,90,1257	0/0:10,0:10:30.10:0,30,419
chr10	40636530	.	C	CAACCA	14509.35	PASS	AB=0.585;AC=20;AF=0.357;AN=56;BaseQRankSum=16.834;DP=648;FS=5.662;HRun=0;HaplotypeScore=177.8580;InbreedingCoeff=0.8494;MQ=61.34;MQ0=0;MQRankSum=-17.843;QD=56.24;ReadPosRankSum=0.406;VQSLOD=5.0255;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,22:38:8.93:1615,9,0	0/0:6,0:6:18.02:0,18,366	0/0:7,0:7:21.07:0,21,489	0/0:16,0:16:39.13:0,39,867	0/1:2,9:12:37.69:152,0,38	1/1:2,18:20:60.21:1543,60,0	1/1:5,15:21:21.50:1286,21,0	0/0:24,0:24:69.23:0,69,1541	1/1:7,17:24:71.05:1547,71,0	0/0:21,0:21:63.22:0,63,1398	0/0:9,0:9:24.07:0,24,513	0/0:21,0:21:63.22:0,63,1439	1/1:7,28:35:99:2341,100,0	1/1:9,14:24:4.56:1230,5,0	1/1:5,16:21:29.01:1284,29,0	1/1:3,23:26:78.25:1895,78,0	1/1:10,17:27:68.41:1435,68,0	0/0:23,0:23:69.21:0,69,1461	0/0:35,0:35:99:0,102,2113	0/0:14,0:14:32.38:0,32,739	0/0:75,0:75:99:0,223,4887	0/1:4,6:10:0.54:181,0,1	0/0:19,0:19:54.17:0,54,1180	0/0:38,0:38:99:0,105,2242	0/0:17,0:17:45.15:0,45,1015	0/0:25,0:25:72.22:0,72,1589	0/0:30,0:30:90.31:0,90,2085	0/0:10,0:10:30.10:0,30,698
chr10	40636898	.	CTCTGAG	C	14817.12	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-3.106;DP=678;FS=0.000;HRun=0;HaplotypeScore=178.7002;InbreedingCoeff=0.9974;MQ=69.68;MQ0=0;MQRankSum=-17.844;QD=59.51;ReadPosRankSum=-1.067;VQSLOD=4.2248;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,102,3435	1/1:0,5:5:15.05:351,15,0	0/0:21,0:21:60.66:0,61,1972	0/0:22,0:21:62.72:0,63,1896	0/0:19,0:19:51.18:0,51,1868	0/0:20,0:20:60.21:0,60,2111	0/0:37,0:37:99:0,108,3700	1/1:1,21:22:66.18:1447,66,0	0/0:30,0:30:87.30:0,87,3069	1/1:0,36:36:99:2573,108,0	1/1:0,10:10:27.09:630,27,0	0/0:31,0:31:90.27:0,90,3008	0/0:17,0:17:51.16:0,51,1693	0/0:31,0:31:93.30:0,93,3179	0/0:33,0:33:96.30:0,96,3194	0/0:26,0:26:78.25:0,78,2773	0/0:50,0:50:99:0,148,5206	1/1:0,21:21:52.42:1249,52,0	1/1:0,15:15:45.15:998,45,0	1/1:0,15:15:42.14:967,42,0	1/1:2,40:42:63.96:1311,64,0	0/0:10,0:10:30.10:0,30,1098	0/0:10,0:10:30.10:0,30,1098	0/0:37,0:37:99:0,111,3984	1/1:2,17:19:45.15:1048,45,0	1/1:1,26:27:78.27:1810,78,0	1/1:0,27:27:75.12:1785,75,0	1/1:0,10:10:27.09:648,27,0
chr10	40637277	.	TAAAC	T	21726.12	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=2.654;DP=732;FS=1.615;HRun=0;HaplotypeScore=131.6960;InbreedingCoeff=0.9422;MQ=66.71;MQ0=1;MQRankSum=-5.524;QD=31.72;ReadPosRankSum=5.866;VQSLOD=4.9910;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,25:32:20.02:1024,20,0	1/1:3,5:8:5.92:100,6,0	0/0:28,0:26:48.15:0,48,1058	0/0:19,0:16:24.08:0,24,575	1/1:6,19:25:48.09:753,48,0	1/1:11,21:32:57.13:904,57,0	1/1:6,11:17:27.01:416,27,0	1/1:9,24:33:63.19:1010,63,0	1/1:1,19:20:45.15:749,45,0	1/1:8,30:38:90.26:1437,90,0	1/1:7,19:26:54.18:899,54,0	1/1:3,23:27:66.22:1098,66,0	1/1:9,19:28:57.19:949,57,0	1/1:8,15:23:42.14:687,42,0	1/1:9,24:33:69.24:1148,69,0	1/1:7,18:25:39.13:649,39,0	1/1:5,24:29:60.10:964,60,0	1/1:8,24:32:60.20:999,60,0	1/1:6,8:14:24.08:395,24,0	1/1:8,16:24:42.08:667,42,0	1/1:4,36:40:87.23:1416,87,0	1/1:9,12:21:33.11:549,33,0	1/1:3,26:29:65.73:1065,66,0	1/1:3,17:20:33.11:549,33,0	1/1:11,20:31:48.10:767,48,0	1/1:7,17:24:51.10:745,51,0	1/1:12,31:43:78.27:1298,78,0	1/1:1,10:11:30.10:488,30,0
chr10	40637482	.	G	GT	2041.31	PASS	AB=0.714;AC=20;AF=0.357;AN=56;BaseQRankSum=-3.687;DP=552;FS=10.378;HRun=13;HaplotypeScore=101.7098;InbreedingCoeff=0.6551;MQ=77.12;MQ0=3;MQRankSum=-0.999;QD=9.72;ReadPosRankSum=0.396;VQSLOD=1.9756;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:5,13:21:31.46:140,0,31	0/0:7,0:7:17.83:0,18,123	0/0:32,0:19:5.47:0,5,31	0/0:19,0:15:8.34:0,8,48	1/1:8,14:23:19.77:258,20,0	1/1:5,8:13:17.51:146,18,0	0/1:8,10:18:6.92:218,0,7	0/1:23,0:23:7.46:7,0,169	1/1:0,8:8:15.02:139,15,0	0/0:22,0:22:40.28:0,40,259	0/0:28,0:30:49.56:0,50,403	0/0:26,0:26:19.29:0,19,264	1/1:9,4:13:3.62:166,4,0	0/1:5,6:11:8.54:72,0,9	1/1:3,8:14:14.97:244,15,0	1/1:3,11:14:27.03:249,27,0	1/1:9,20:29:14.98:406,15,0	0/0:18,0:18:24.77:0,25,179	0/0:20,0:20:38.52:0,39,263	0/0:20,0:20:13.96:0,14,217	0/0:19,0:19:38.30:0,38,253	1/1:10,12:22:23.77:196,24,0	0/0:17,1:21:14.82:0,15,227	0/0:19,0:20:46.54:0,47,309	0/0:27,0:30:47.53:0,48,300	0/0:20,0:21:37.63:0,38,252	0/0:20,1:23:17.85:0,18,248	0/0:13,0:13:38.65:0,39,265
chr10	40637514	.	T	TTGTGTGTGTGTTTGTGTGTGTGTGTG	15652.98	PASS	AB=0.637;AC=25;AF=0.446;AN=56;BaseQRankSum=1.437;DP=615;FS=3.346;HRun=0;HaplotypeScore=416.8963;InbreedingCoeff=0.5577;MQ=64.87;MQ0=7;MQRankSum=-7.747;QD=46.31;ReadPosRankSum=-1.778;VQSLOD=2.1095;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:30:8.35:640,0,8	0/0:1,0:7:6.49:0,6,205	0/0:28,0:20:0.14:0,0,154	0/0:33,0:16:9.83:0,10,324	1/1:18,0:18:12.98:924,13,0	1/1:22,0:21:18.05:1057,18,0	1/1:19,0:19:13.78:595,14,0	0/1:5,0:23:21.56:22,0,826	1/1:14,0:14:15.50:1049,16,0	0/1:2,0:34:99:203,0,1732	0/0:8,0:28:4.80:0,5,675	0/0:20,0:20:48.12:0,48,2827	1/1:8,1:20:15.52:1302,16,0	1/1:19,0:19:24.08:1990,24,0	1/1:28,0:30:42.59:3132,43,0	1/1:14,0:14:12.04:494,12,0	1/1:27,0:27:39.08:2616,39,0	0/0:4,0:14:15.05:0,15,440	0/1:5,0:18:22.63:23,0,1102	0/0:2,0:17:22.03:0,22,1384	0/0:6,0:29:21.72:0,22,2024	1/1:14,0:15:24.95:1534,25,0	0/0:21,0:21:51.08:0,51,2278	0/0:21,0:21:51.16:0,51,2899	0/1:4,0:35:73.35:73,0,1511	0/0:9,0:25:18.78:0,19,1372	0/0:5,0:20:33.05:0,33,1653	0/0:2,0:13:33.11:0,33,1367
chr10	40640060	.	TGCACATGACA	T	15842.95	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=17.977;DP=796;FS=2.372;HRun=0;HaplotypeScore=278.0031;InbreedingCoeff=0.9989;MQ=67.70;MQ0=4;MQRankSum=-18.038;QD=55.79;ReadPosRankSum=4.749;VQSLOD=4.4540;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,17:22:27.56:917,28,0	0/0:21,0:21:54.17:0,54,2684	0/0:25,0:19:38.76:0,39,811	0/0:31,0:16:45.12:0,45,1389	1/1:4,18:22:31.93:1018,32,0	1/1:7,13:20:21.07:658,21,0	1/1:7,22:29:39.13:1323,39,0	0/0:56,0:55:99:0,166,7695	1/1:2,18:20:36.12:1221,36,0	0/0:35,0:35:99:0,99,4973	0/0:22,0:22:50.03:0,50,2656	0/0:42,0:42:99:0,120,6246	1/1:6,23:29:51.18:1646,51,0	1/1:1,27:28:51.18:1730,51,0	1/1:4,41:45:84.29:2850,84,0	1/1:3,23:26:48.16:1629,48,0	1/1:3,10:13:24.08:815,24,0	0/0:25,0:25:72.25:0,72,3620	0/0:21,0:21:63.22:0,63,3232	0/0:17,0:17:45.15:0,45,2234	0/0:63,0:63:99:0,184,9334	1/1:4,26:30:60.21:2035,60,0	0/0:20,0:20:51.16:0,51,2448	0/0:27,0:27:78.27:0,78,4111	0/0:30,0:30:90.31:0,90,4457	0/0:28,0:28:81.28:0,81,3845	0/0:24,0:24:69.21:0,69,3396	0/0:24,0:24:69.17:0,69,2771
chr10	40640377	.	CTTTCTTTTT	C	3917.18	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=1.717;DP=476;FS=16.708;HRun=0;HaplotypeScore=111.4760;InbreedingCoeff=0.5990;MQ=61.34;MQ0=29;MQRankSum=2.379;QD=14.78;ReadPosRankSum=3.731;VQSLOD=1.1427;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:13:16.81:0,17,235	1/1:6,2:8:17.95:233,18,0	0/0:44,0:15:11.45:0,11,222	0/0:48,0:14:13.12:0,13,326	0/0:14,0:14:20.70:0,21,205	0/0:6,0:6:17.18:0,17,173	0/0:8,0:7:14.84:0,15,241	1/1:21,0:20:25.97:216,26,0	0/0:9,0:8:13.81:0,14,293	1/1:3,14:17:26.72:392,27,0	1/1:3,0:12:14.79:108,15,0	0/1:17,0:17:53.33:269,0,53	0/1:12,0:12:54.75:147,0,55	0/1:15,0:13:45.46:160,0,45	0/0:20,0:20:33.76:0,34,527	0/0:7,0:7:17.96:0,18,227	0/0:25,0:22:29.91:0,30,490	1/1:21,2:25:39.80:563,40,0	1/1:12,0:10:17.44:215,17,0	1/1:2,13:14:22.47:179,22,0	1/1:7,0:6:10.72:106,11,0	0/0:14,0:13:26.24:0,26,153	0/1:15,0:15:83.45:83,0,109	0/1:22,0:22:52.46:163,0,52	1/1:3,9:11:9.01:162,9,0	1/1:15,0:14:35.78:355,36,0	1/1:4,16:19:10.08:126,10,0	1/1:19,1:19:40.77:440,41,0
chr10	40640380	.	TC	T	2262.81	PASS	AB=1.000;AC=28;AF=0.500;AN=56;BaseQRankSum=-3.260;DP=461;FS=6.538;HRun=1;HaplotypeScore=68.5656;InbreedingCoeff=0.6348;MQ=59.45;MQ0=31;MQRankSum=1.564;QD=10.24;ReadPosRankSum=-2.175;VQSLOD=0.5437;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:12:1.54:0,2,83	1/1:8,0:8:14.98:85,15,0	0/0:43,1:14:2.46:0,2,104	0/0:48,1:13:3.99:0,4,132	0/0:8,4:12:4.92:0,5,103	0/1:6,0:6:26.37:27,0,26	0/1:7,0:6:2.16:2,0,45	1/1:1,19:19:44.43:296,44,0	0/1:13,0:11:0.13:0,0,70	1/1:14,1:15:35.40:268,35,0	1/1:12,0:12:16.75:90,17,0	0/0:16,0:16:18.18:0,18,92	0/0:11,0:11:7.67:0,8,90	0/0:15,0:13:23.28:0,23,115	0/1:19,0:18:27.73:31,0,28	0/0:7,0:7:13.71:0,14,94	0/0:21,0:18:11.80:0,12,109	1/1:26,1:27:62.36:419,62,0	1/1:11,0:9:20.75:188,21,0	1/1:15,0:13:22.63:150,23,0	1/1:6,0:5:13.01:85,13,0	0/0:14,0:13:15.48:0,15,106	0/0:16,0:16:21.88:0,22,127	0/0:22,0:22:15.97:0,16,83	1/1:10,1:10:8.21:55,8,0	1/1:15,0:14:38.69:321,39,0	1/1:19,0:18:8.86:61,9,0	1/1:17,0:16:47.85:386,48,0
chr10	40640399	.	T	TTTTTC	625.71	PASS	AB=1.000;AC=20;AF=0.370;AN=54;BaseQRankSum=1.535;DP=469;FS=2.995;HRun=0;HaplotypeScore=99.3409;InbreedingCoeff=0.5478;MQ=44.05;MQ0=53;MQRankSum=-2.035;QD=3.56;ReadPosRankSum=1.036;VQSLOD=2.0186;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:3,1:17:2.03:66,2,0	0/0:12,0:12:15.21:0,15,101	./.	0/1:52,0:9:2.90:3,0,29	1/1:6,0:6:0.47:1,0,0	1/1:6,0:6:8.85:80,9,0	1/1:6,0:5:7.12:39,7,0	0/0:14,0:13:3.82:0,4,22	1/1:2,0:8:6.02:65,6,0	0/0:18,0:16:21.77:0,22,181	0/0:23,0:20:17.76:0,18,131	0/0:18,0:17:26.95:0,27,270	0/1:8,0:8:17.47:31,0,17	0/1:16,0:13:21.25:21,0,55	1/1:21,0:20:27.71:268,28,0	1/1:1,4:6:3.01:76,3,0	1/1:13,8:20:8.39:142,8,0	0/0:28,0:28:43.95:0,44,385	0/0:9,0:6:11.94:0,12,87	0/0:12,0:10:2.90:0,3,17	0/0:9,0:8:14.38:0,14,125	0/1:4,0:4:0:0,0,0	0/0:19,0:18:16.41:0,16,120	0/0:24,0:24:23.69:0,24,195	0/0:12,0:11:17.93:0,18,155	0/0:21,0:19:35.85:0,36,282	0/0:20,0:19:17.87:0,18,147	0/0:15,0:10:23.95:0,24,206
chr10	40640511	.	A	ACC	367.83	PASS	AB=0.778;AC=15;AF=0.300;AN=50;BaseQRankSum=4.267;DP=277;FS=12.980;HRun=6;HaplotypeScore=59.6217;InbreedingCoeff=0.7376;MQ=74.40;MQ0=0;MQRankSum=-2.825;QD=10.51;ReadPosRankSum=-1.884;VQSLOD=-0.6006;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,0:2:2.97:20,3,0	0/0:5,0:5:9.02:0,9,109	0/0:9,0:9:19.77:0,20,246	0/0:9,0:9:14.66:0,15,247	./.	1/1:5,1:6:8.97:81,9,0	0/1:5,2:6:6.16:120,0,6	0/0:15,0:15:42.02:0,42,419	./.	0/0:9,0:9:12.24:0,12,138	0/0:5,0:5:9.02:0,9,89	0/0:22,0:22:56.94:0,57,679	1/1:1,3:4:11.97:123,12,0	1/1:3,0:3:6:52,6,0	./.	1/1:3,1:4:8.90:66,9,0	1/1:6,0:6:2.97:20,3,0	0/0:29,0:29:69.02:0,69,651	0/0:8,0:8:21.03:0,21,211	0/0:12,0:12:30.02:0,30,285	0/0:32,0:31:68.92:0,69,620	1/1:3,0:3:3.01:48,3,0	0/0:9,0:9:24.07:0,24,291	0/0:31,0:31:75.01:0,75,839	0/0:8,0:8:23.99:0,24,229	0/0:14,0:14:33.04:0,33,326	0/0:15,0:14:28.78:0,29,238	0/0:6,0:6:18:0,18,175
chr10	40640520	.	A	AC	4157.83	PASS	AB=0.800;AC=36;AF=0.720;AN=50;BaseQRankSum=-6.382;DP=270;FS=8.193;HRun=7;HaplotypeScore=35.0895;InbreedingCoeff=0.7368;MQ=80.46;MQ0=0;MQRankSum=-2.081;QD=22.47;ReadPosRankSum=-0.501;VQSLOD=2.2424;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,2:2:0.47:1,0,0	1/1:3,3:6:3.01:36,3,0	0/0:10,0:10:18.02:0,18,174	0/0:10,0:10:23.60:0,24,223	0/0:2,0:2:0:0,0,0	0/1:2,4:6:0:0,0,0	1/1:5,4:8:17.68:174,18,0	1/1:3,13:16:39.11:460,39,0	./.	1/1:6,4:10:12.04:144,12,0	1/1:1,4:5:6.02:72,6,0	0/0:24,0:24:57.08:0,57,550	1/1:5,1:6:8.96:88,9,0	./.	./.	1/1:1,2:3:3.01:36,3,0	1/1:3,4:7:6.02:70,6,0	1/1:1,29:30:72.22:870,72,0	1/1:0,9:9:27.08:324,27,0	1/1:2,8:10:18.06:217,18,0	1/1:0,28:27:60.18:725,60,0	0/1:1,0:1:0:0,0,0	0/0:10,0:10:23.71:0,24,231	0/0:29,0:29:66.04:0,66,626	1/1:2,4:6:12.04:145,12,0	1/1:2,11:13:33.10:399,33,0	1/1:1,11:11:24.07:290,24,0	1/1:3,3:6:9.03:108,9,0
chr10	40641565	.	C	CG	23265.03	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-13.784;DP=703;FS=14.990;HRun=0;HaplotypeScore=79.2013;InbreedingCoeff=0.9979;MQ=97.38;MQ0=0;MQRankSum=-9.825;QD=43.73;ReadPosRankSum=3.108;VQSLOD=3.8333;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,23:24:63.21:1006,63,0	1/1:0,17:17:51.17:814,51,0	0/0:32,0:32:96.26:0,96,1287	0/0:38,0:38:99:0,112,1417	1/1:1,14:15:39.13:622,39,0	1/1:1,25:26:72.25:1149,72,0	1/1:0,34:34:99:1580,99,0	1/1:2,29:31:87.24:1286,87,0	1/1:0,25:25:66.23:1054,66,0	1/1:1,22:23:63.20:977,63,0	1/1:1,15:16:48.16:746,48,0	0/0:40,0:40:99:0,120,1629	1/1:0,24:24:66.23:1052,66,0	1/1:0,27:27:69.24:1100,69,0	1/1:0,25:25:75.26:1198,75,0	1/1:0,19:19:51.17:814,51,0	1/1:0,23:23:66.23:1053,66,0	1/1:0,42:42:99:1869,117,0	1/1:0,22:22:60.19:921,60,0	1/1:0,20:20:51.17:814,51,0	1/1:1,37:38:99:1628,102,0	1/1:0,18:18:51.17:815,51,0	0/0:15,0:15:45.15:0,45,629	0/0:46,0:46:99:0,135,1864	1/1:0,10:10:30.10:479,30,0	1/1:1,32:33:93.32:1476,93,0	1/1:0,11:11:33.11:523,33,0	1/1:0,9:9:18.06:287,18,0
chr10	40641998	.	A	AT	16576.46	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-10.597;DP=661;FS=0.963;HRun=8;HaplotypeScore=62.0371;InbreedingCoeff=0.9954;MQ=74.77;MQ0=0;MQRankSum=-2.044;QD=28.83;ReadPosRankSum=1.025;VQSLOD=5.1520;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,27:32:61.12:694,61,0	1/1:1,12:13:36.11:415,36,0	0/0:15,0:15:28.96:0,29,243	0/0:8,0:8:14.68:0,15,120	1/1:2,23:25:66.20:762,66,0	1/1:3,24:27:63.19:723,63,0	1/1:3,27:30:70.45:799,70,0	1/1:5,24:30:50.58:806,51,0	1/1:4,23:28:74.87:817,75,0	1/1:3,19:22:60.16:680,60,0	1/1:4,19:23:54.08:593,54,0	0/0:29,0:29:84.04:0,84,769	1/1:2,23:25:66.19:755,66,0	1/1:1,17:18:48.14:554,48,0	1/1:0,22:22:66.19:758,66,0	1/1:7,20:27:60.18:693,60,0	1/1:3,35:38:99:1143,99,0	1/1:2,24:26:69.20:794,69,0	1/1:1,15:16:45.13:519,45,0	1/1:1,24:25:69.12:767,69,0	1/1:4,17:21:48.61:555,49,0	1/1:0,11:11:30.05:331,30,0	0/0:13,0:13:33.01:0,33,301	0/0:21,0:20:54.02:0,54,494	1/1:2,27:29:80.05:906,80,0	1/1:2,26:28:69.19:782,69,0	1/1:6,44:50:99:1419,123,0	1/1:0,9:9:27.08:312,27,0
chr10	40642705	.	CTCTCTCTT	C	2554.16	PASS	AB=1.000;AC=14;AF=0.250;AN=56;BaseQRankSum=8.328;DP=623;FS=3.749;HRun=0;HaplotypeScore=200.0500;InbreedingCoeff=0.2055;MQ=49.28;MQ0=13;MQRankSum=4.225;QD=9.09;ReadPosRankSum=0.306;VQSLOD=2.3735;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:23:99:125,0,229	0/0:5,0:5:12.41:0,12,256	0/0:24,0:15:25.13:0,25,363	0/0:34,0:14:6.03:0,6,241	0/1:20,0:20:99:114,0,212	1/1:9,0:9:8.31:66,8,0	0/1:32,0:31:18.58:19,0,225	0/0:24,0:24:69.62:0,70,1092	0/1:28,0:27:99:200,0,266	0/0:30,0:30:83.98:0,84,1637	0/0:19,0:18:40.95:0,41,422	0/0:28,0:28:58.93:0,59,981	1/1:28,5:33:75.48:986,75,0	1/1:22,4:26:59.86:704,60,0	0/1:35,0:35:99:135,0,563	0/1:29,0:29:99:137,0,297	0/1:20,0:19:96.26:96,0,317	0/0:20,0:20:47.91:0,48,514	0/0:8,0:8:24:0,24,484	0/0:22,0:22:51.20:0,51,496	0/0:9,0:9:20.88:0,21,309	0/1:26,0:26:99:145,0,150	0/0:18,0:18:19.88:0,20,410	0/0:33,0:32:44.53:0,45,1015	0/0:20,0:20:37.74:0,38,264	0/0:16,0:16:29.76:0,30,547	0/0:16,0:15:36.49:0,36,705	0/0:16,0:12:27.95:0,28,486
chr10	40642724	.	TCA	T	6784	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=15.099;DP=609;FS=10.459;HRun=0;HaplotypeScore=139.3490;InbreedingCoeff=0.9977;MQ=61.80;MQ0=3;MQRankSum=-5.057;QD=25.41;ReadPosRankSum=1.714;VQSLOD=5.6820;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,20:22:42.14:540,42,0	0/0:7,0:7:18.06:0,18,297	0/0:33,0:28:72.22:0,72,1120	0/0:39,0:24:56.97:0,57,890	1/1:0,19:19:51.17:655,51,0	1/1:1,14:15:30.10:385,30,0	1/1:7,17:24:36.11:463,36,0	0/0:17,0:17:42.14:0,42,706	1/1:5,21:26:60.19:771,60,0	0/0:29,0:29:75.26:0,75,1262	0/0:16,0:16:45.63:0,46,760	0/0:24,0:24:54.18:0,54,904	1/1:9,31:40:81.17:1020,81,0	1/1:9,21:30:57.13:713,57,0	1/1:7,25:32:63.14:809,63,0	1/1:3,15:18:38.96:501,39,0	1/1:5,13:18:30.10:386,30,0	0/0:20,0:20:48.12:0,48,779	0/0:11,0:11:30.10:0,30,506	0/0:23,0:23:57.12:0,57,929	0/0:11,0:11:24.04:0,24,378	1/1:4,19:23:42.07:540,42,0	0/0:21,0:21:37.07:0,37,651	0/0:30,0:29:60.21:0,60,1012	0/0:23,0:23:60.21:0,60,1011	0/0:16,0:16:47.91:0,48,732	0/0:15,0:15:35.71:0,36,566	0/0:7,0:7:21.02:0,21,322
chr10	40643011	.	TG	T	2556.11	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-3.632;DP=647;FS=4.228;HRun=4;HaplotypeScore=88.9176;InbreedingCoeff=0.9795;MQ=84.05;MQ0=0;MQRankSum=-2.499;QD=29.72;ReadPosRankSum=0.604;VQSLOD=3.5387;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:78.26:0,78,1092	0/0:4,0:4:9.03:0,9,126	0/0:23,0:23:67.45:0,67,888	0/0:22,0:22:54.10:0,54,683	0/0:22,0:22:57.19:0,57,797	0/0:24,0:24:60.19:0,60,822	0/0:21,0:21:63.19:0,63,862	0/0:31,0:31:78.23:0,78,1045	0/0:28,0:28:81.27:0,81,1132	0/0:19,0:19:54.18:0,54,756	0/0:20,0:20:48.16:0,48,671	1/1:4,27:31:78.24:935,78,0	0/0:18,0:18:51.17:0,51,701	0/0:23,0:23:66.21:0,66,907	0/0:35,0:35:99:0,102,1389	0/0:18,0:18:51.17:0,51,714	0/0:25,0:25:72.22:0,72,990	0/0:29,0:29:84.28:0,84,1176	0/0:13,0:13:36.12:0,36,504	0/0:22,0:22:60.20:0,60,840	0/0:37,0:37:99:0,111,1537	0/0:19,0:19:48.14:0,48,653	1/1:0,21:21:57.17:684,57,0	1/1:2,32:34:90.27:1080,90,0	0/0:15,0:15:45.15:0,45,629	0/0:27,0:27:75.25:0,75,1050	0/0:23,0:23:63.21:0,63,882	0/0:13,0:13:39.13:0,39,546
chr10	40643146	.	C	CG	197.09	PASS	AC=4;AF=0.077;AN=52;BaseQRankSum=1.395;DP=342;FS=4.772;HRun=1;HaplotypeScore=56.8017;InbreedingCoeff=0.7791;MQ=40.49;MQ0=37;MQRankSum=-1.830;QD=12.32;ReadPosRankSum=0.411;VQSLOD=2.0151;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:17:45.08:0,45,512	0/0:8,0:7:12:0,12,135	./.	./.	0/0:17,0:16:36.03:0,36,417	0/0:9,0:9:24.04:0,24,269	0/0:8,0:4:5.97:0,6,57	0/0:21,0:20:54.14:0,54,672	0/0:8,0:8:24.05:0,24,273	0/0:19,0:18:51.10:0,51,597	0/0:14,0:12:15.04:0,15,179	0/0:12,0:12:29.52:0,30,366	1/1:2,6:6:9.03:126,9,0	1/1:2,6:7:12.04:178,12,0	0/0:13,0:12:30.06:0,30,337	0/0:5,0:5:12.03:0,12,143	0/0:16,0:13:34.28:0,34,381	0/0:16,0:14:36.09:0,36,438	0/0:17,0:15:42.03:0,42,464	0/0:10,0:10:26.94:0,27,265	0/0:4,0:1:3.01:0,3,38	0/0:18,0:16:42.06:0,42,476	0/0:13,0:12:27.07:0,27,324	0/0:11,0:10:18.39:0,18,281	0/0:13,0:12:21.07:0,21,270	0/0:17,0:15:27.04:0,27,318	0/0:18,0:17:51.07:0,51,584	0/0:10,0:9:15.05:0,15,191
chr10	40643179	.	AAG	A	5323.82	PASS	AB=1.000;AC=48;AF=0.857;AN=56;BaseQRankSum=-6.421;DP=514;FS=15.409;HRun=0;HaplotypeScore=78.3560;InbreedingCoeff=0.4245;MQ=43.90;MQ0=49;MQRankSum=-0.255;QD=11.05;ReadPosRankSum=-5.492;VQSLOD=2.1216;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:32,1:25:46.91:324,47,0	1/1:7,0:6:17.43:112,17,0	0/1:18,0:6:1.53:2,0,48	0/0:16,0:4:4.39:0,4,27	1/1:38,0:34:62.39:486,62,0	1/1:9,0:8:20.23:169,20,0	1/1:9,0:6:5.65:67,6,0	1/1:32,0:27:55.37:373,55,0	1/1:9,0:9:5.97:95,6,0	0/1:16,0:16:1.52:219,0,2	1/1:26,0:25:24.52:150,25,0	0/1:17,0:17:10.52:11,0,172	1/1:15,0:13:29.73:189,30,0	1/1:11,0:11:26.69:193,27,0	1/1:18,0:17:35.82:250,36,0	1/1:15,0:13:23.90:163,24,0	1/1:15,0:13:8.09:127,8,0	1/1:33,0:29:40.68:337,41,0	1/1:22,0:19:44.93:292,45,0	1/1:19,0:18:35.35:269,35,0	1/1:9,0:5:14.71:93,15,0	1/1:14,0:13:30.55:211,31,0	0/0:16,0:16:9.39:0,9,100	0/1:11,0:9:19.05:19,0,63	1/1:25,0:23:49.93:348,50,0	1/1:4,23:25:48.44:347,48,0	1/1:21,0:21:52.03:356,52,0	1/1:12,0:10:16.16:122,16,0
chr10	40643180	.	AG	A	6046.24	PASS	AB=1.000;AC=48;AF=0.857;AN=56;BaseQRankSum=-3.679;DP=499;FS=0.747;HRun=1;HaplotypeScore=68.7170;InbreedingCoeff=0.5235;MQ=44.45;MQ0=49;MQRankSum=-1.034;QD=13.50;ReadPosRankSum=-1.286;VQSLOD=3.3843;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:33,0:25:57.88:390,58,0	1/1:7,0:6:17.66:126,18,0	0/0:19,0:7:1.66:0,2,78	0/0:15,1:4:3.92:0,4,26	1/1:37,1:34:88.39:594,88,0	1/1:10,0:9:20.93:178,21,0	1/1:9,0:6:13.75:96,14,0	1/1:29,0:24:56.91:394,57,0	1/1:10,0:10:24.49:166,24,0	1/1:12,2:14:6.29:227,6,0	1/1:3,20:22:23.75:163,24,0	0/1:19,0:18:34.48:34,0,169	1/1:14,0:12:32.16:213,32,0	1/1:10,0:10:26.70:195,27,0	1/1:18,0:17:47.82:316,48,0	1/1:15,0:13:35.15:199,35,0	1/1:14,0:12:25.37:155,25,0	1/1:31,0:27:67.03:405,67,0	1/1:5,17:19:46.29:294,46,0	1/1:19,0:18:42.17:306,42,0	1/1:9,0:5:14.55:90,15,0	1/1:13,0:12:32.34:219,32,0	0/0:16,0:16:9.27:0,9,81	0/1:11,0:9:21.51:22,0,51	1/1:22,0:20:51.79:393,52,0	1/1:26,0:24:50.32:350,50,0	1/1:21,0:21:53.06:374,53,0	1/1:11,0:9:25.02:147,25,0
chr10	40643191	.	AG	A	4768.36	PASS	AB=0.972;AC=47;AF=0.839;AN=56;BaseQRankSum=1.892;DP=429;FS=28.795;HRun=1;HaplotypeScore=71.5268;InbreedingCoeff=0.4860;MQ=64.09;MQ0=16;MQRankSum=0.210;QD=12.72;ReadPosRankSum=1.731;VQSLOD=2.0751;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:22:39.89:286,40,0	1/1:5,0:4:10.53:77,11,0	0/0:25,1:13:4.02:0,4,217	0/1:19,2:10:12.77:13,0,31	1/1:31,0:28:59.41:414,59,0	1/1:12,0:11:19.39:217,19,0	1/1:11,0:11:28.40:211,28,0	1/1:12,12:20:26.33:203,26,0	1/1:12,0:12:30.22:216,30,0	0/1:13,0:13:9.24:170,0,9	1/1:16,0:15:34.80:251,35,0	0/1:21,0:21:32.13:32,0,356	1/1:11,0:10:22.87:158,23,0	1/1:9,0:9:23.81:188,24,0	1/1:11,0:11:20.32:155,20,0	1/1:13,0:11:19.26:133,19,0	1/1:10,0:10:23.74:178,24,0	1/1:22,0:21:45.81:305,46,0	1/1:20,0:19:23.33:206,23,0	1/1:14,0:14:35.31:283,35,0	1/1:3,0:3:0.98:17,1,0	1/1:13,0:13:32.28:260,32,0	0/0:15,0:15:21.48:0,21,245	0/0:13,0:12:7.82:0,8,154	1/1:18,0:17:38.98:343,39,0	1/1:20,0:20:35.04:254,35,0	1/1:14,0:14:18.45:153,18,0	1/1:5,0:5:9.89:46,10,0
chr10	40643323	.	TGGAGACATAC	T	1595.93	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=6.582;DP=628;FS=0.912;HRun=0;HaplotypeScore=199.1167;InbreedingCoeff=0.9576;MQ=87.76;MQ0=0;MQRankSum=-5.975;QD=43.13;ReadPosRankSum=0.838;VQSLOD=3.2554;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,117,5235	0/0:7,0:7:21.06:0,21,796	0/0:22,0:22:63.22:0,63,2942	0/0:27,0:27:74.85:0,75,3597	0/0:20,0:20:57.19:0,57,2419	1/1:1,4:5:6.02:204,6,0	1/1:0,19:19:24.08:814,24,0	0/0:36,0:36:99:0,105,5317	1/1:0,13:13:21.07:712,21,0	0/0:23,0:23:69.24:0,69,3460	0/0:17,0:17:51.16:0,51,2424	0/0:27,0:27:72.23:0,72,3729	0/0:21,0:21:57.18:0,57,2233	0/0:13,0:13:39.13:0,39,1786	0/0:31,0:31:93.31:0,93,4046	0/0:28,0:28:81.27:0,81,3508	0/0:37,0:37:99:0,105,4459	0/0:16,0:16:45.15:0,45,2291	0/0:27,0:27:81.28:0,81,4081	0/0:21,0:21:60.19:0,60,3095	0/0:41,0:41:99:0,120,6084	0/0:13,0:13:36.11:0,36,1517	0/0:17,0:17:51.15:0,51,2478	0/0:31,0:31:93.32:0,93,4642	0/0:18,0:18:54.19:0,54,2912	0/0:21,0:21:60.18:0,60,2954	0/0:23,0:22:60.21:0,60,3194	0/0:11,0:11:33.11:0,33,1668
chr10	40645736	.	ACTCTGTCTCTCTCTGT	A	9869.99	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=13.135;DP=767;FS=4.265;HRun=0;HaplotypeScore=289.0251;InbreedingCoeff=0.9677;MQ=72.66;MQ0=12;MQRankSum=-11.959;QD=39.01;ReadPosRankSum=0.841;VQSLOD=3.4606;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:8,24:32:30.10:1231,30,0	0/0:11,0:11:21.07:0,21,1307	0/0:73,0:40:31.23:0,31,703	0/0:85,0:41:27.53:0,28,670	1/1:7,18:25:24.08:986,24,0	1/1:2,22:24:30.10:1335,30,0	1/1:20,0:20:11.96:146,12,0	0/0:38,0:38:63.19:0,63,2787	1/1:1,17:18:18.06:801,18,0	0/0:33,0:33:78.22:0,78,3625	0/0:22,0:22:57.17:0,57,3165	0/0:28,0:28:63.19:0,63,3677	1/1:3,19:22:24.08:1042,24,0	1/1:5,16:21:30.10:1325,30,0	1/1:5,19:24:30.10:1313,30,0	1/1:6,11:17:12.04:534,12,0	1/1:6,14:20:6.07:396,6,0	0/0:30,0:30:63.16:0,63,3741	0/0:22,0:21:39.12:0,39,1986	0/0:16,0:16:33.10:0,33,2274	0/0:27,0:27:69.21:0,69,4628	1/1:9,21:30:18.06:760,18,0	0/0:21,0:21:48.15:0,48,3048	0/0:26,0:26:54.13:0,54,3155	0/0:26,0:26:66.16:0,66,3214	0/0:30,0:30:69.21:0,69,3678	0/0:20,0:20:48.16:0,48,3250	0/0:6,0:6:12.04:0,12,887
chr10	40646720	.	T	TAGCTC	22241.25	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-17.351;DP=768;FS=2.048;HRun=0;HaplotypeScore=138.0394;InbreedingCoeff=0.9999;MQ=79.78;MQ0=0;MQRankSum=-6.484;QD=69.29;ReadPosRankSum=5.381;VQSLOD=5.9696;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,44:51:99:3346,108,0	0/0:14,0:14:36.11:0,36,718	0/0:22,0:22:51.04:0,51,1000	0/0:22,0:22:51.17:0,51,988	1/1:3,18:22:36.12:1113,36,0	1/1:2,17:20:51.18:1579,51,0	1/1:6,20:27:45.15:1350,45,0	0/0:32,0:32:96.32:0,96,1937	1/1:5,27:33:84.29:2594,84,0	0/0:33,0:33:87.30:0,87,1784	0/0:22,0:22:45.12:0,45,854	0/0:46,0:46:99:0,129,2628	1/1:3,18:22:54.19:1672,54,0	1/1:5,31:37:87.30:2691,87,0	1/1:2,29:32:84.29:2602,84,0	1/1:3,24:28:72.25:2230,72,0	1/1:1,18:19:48.16:1487,48,0	0/0:17,0:17:45.12:0,45,885	0/0:21,0:21:63.07:0,63,1224	0/0:24,0:24:63.17:0,63,1206	0/0:48,0:48:99:0,132,2636	1/1:5,25:30:51.01:1578,51,0	0/0:24,0:24:66.21:0,66,1347	0/0:33,0:33:96.31:0,96,1953	0/0:18,0:18:51.14:0,51,994	0/0:30,0:30:81.26:0,81,1662	0/0:29,0:29:78.27:0,78,1622	0/0:12,0:12:36.09:0,36,710
chr10	40647146	.	T	TG	2128.28	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-10.324;DP=652;FS=1.638;HRun=6;HaplotypeScore=69.4618;InbreedingCoeff=0.9969;MQ=78.91;MQ0=0;MQRankSum=-3.204;QD=27.29;ReadPosRankSum=1.921;VQSLOD=4.2577;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:34:99:0,99,1000	0/0:7,0:7:21.05:0,21,214	0/0:15,0:15:33.05:0,33,320	0/0:19,0:19:44.93:0,45,441	0/0:25,0:25:69.15:0,69,702	0/0:26,0:26:69.15:0,69,702	0/0:15,0:15:27.05:0,27,275	0/0:30,0:30:84.18:0,84,851	0/0:32,0:32:78.15:0,78,788	0/0:28,0:28:66.11:0,66,654	0/0:20,0:20:48.02:0,48,465	1/1:3,21:24:26.58:649,27,0	0/0:31,0:31:84.18:0,84,857	0/0:17,0:17:48.10:0,48,484	0/0:19,0:19:57.13:0,57,581	0/0:20,0:20:60.14:0,60,612	0/0:37,0:37:99:0,102,1041	0/0:23,0:23:63.14:0,63,643	0/0:15,0:15:36.07:0,36,363	0/0:28,0:28:69.12:0,69,689	0/0:24,0:24:63.14:0,63,643	0/0:27,0:27:41:0,41,587	1/1:1,28:29:69.22:867,69,0	1/1:3,22:25:60.19:755,60,0	0/0:19,0:19:54.05:0,54,526	0/0:19,0:19:48.09:0,48,484	0/0:32,0:31:90.20:0,90,918	0/0:10,0:10:24.05:0,24,245
chr10	40648476	.	AATAGGTTCG	A	4188.10	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=7.410;DP=737;FS=2.588;HRun=0;HaplotypeScore=289.1868;InbreedingCoeff=0.9963;MQ=72.80;MQ0=1;MQRankSum=-8.779;QD=66.48;ReadPosRankSum=-1.065;VQSLOD=2.6928;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,123,5538	0/0:14,0:14:39.13:0,39,1518	0/0:27,0:27:69.22:0,69,2445	0/0:23,0:21:57.15:0,57,2117	0/0:27,0:27:67.46:0,67,2826	0/0:19,0:19:54.17:0,54,2415	0/0:26,0:26:75.21:0,75,3198	0/0:35,0:34:96.32:0,96,4245	0/0:32,0:32:96.31:0,96,4388	0/0:42,0:42:99:0,120,5112	0/0:8,0:8:24.08:0,24,1090	1/1:2,25:26:69.24:2091,69,0	0/0:25,0:25:72.25:0,72,2897	0/0:24,0:24:60.21:0,60,2774	0/0:27,0:27:75.71:0,76,3115	0/0:41,0:41:99:0,109,4785	0/0:29,0:29:72.23:0,72,2989	0/0:20,0:20:60.14:0,60,2464	0/0:19,0:19:47.52:0,48,1747	0/0:30,0:30:75.19:0,75,2922	0/0:28,0:28:72.20:0,72,2981	0/0:24,0:24:66.22:0,66,2745	1/1:4,17:21:57.11:1645,57,0	1/1:3,12:13:18.02:452,18,0	0/0:21,0:21:60.20:0,60,2623	0/0:39,0:39:99:0,111,4780	0/0:29,0:29:78.25:0,78,3110	0/0:20,0:20:60.18:0,60,2564
chr10	40648507	.	GTGATGA	G	5007.61	PASS	AB=0.900;AC=43;AF=0.977;AN=44;BaseQRankSum=0.950;DP=593;FS=2.233;HRun=0;HaplotypeScore=230.0461;InbreedingCoeff=-0.0787;MQ=57.10;MQ0=14;MQRankSum=-0.210;QD=10.72;ReadPosRankSum=3.037;VQSLOD=3.6941;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:32,0:36:8.97:132,0,9	1/1:6,0:9:9.03:126,9,0	./.	./.	1/1:16,0:21:8.52:71,9,0	1/1:14,7:21:24.07:445,24,0	1/1:22,8:30:36.12:615,36,0	./.	1/1:14,15:29:54.17:1008,54,0	1/1:29,0:33:12.04:168,12,0	1/1:5,0:8:5.99:63,6,0	1/1:21,0:28:3.49:312,3,0	1/1:13,0:22:27.56:378,28,0	1/1:16,0:18:4.70:82,5,0	1/1:16,0:19:9.01:100,9,0	1/1:20,0:27:21.07:282,21,0	1/1:16,0:18:6.01:69,6,0	./.	1/1:10,0:11:6.02:84,6,0	1/1:17,0:22:15.04:193,15,0	./.	1/1:13,0:16:9.02:109,9,0	1/1:12,0:19:24.05:317,24,0	1/1:12,0:15:5.41:95,5,0	1/1:14,0:18:12.04:152,12,0	1/1:24,0:26:6.02:82,6,0	1/1:13,0:16:9.03:126,9,0	./.
chr10	40648561	.	CTTT	C	8657	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=0.215;DP=500;FS=13.362;HRun=12;HaplotypeScore=183.4447;InbreedingCoeff=0.9724;MQ=46.97;MQ0=10;MQRankSum=-5.633;QD=21.75;ReadPosRankSum=2.372;VQSLOD=1.6945;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,27:29:32.52:355,33,0	1/1:0,14:14:32.74:315,33,0	0/0:23,0:9:20.87:0,21,263	0/0:19,0:11:23.69:0,24,271	1/1:0,19:19:44.31:435,44,0	1/1:1,16:17:23:325,23,0	1/1:4,21:25:17.82:186,18,0	1/1:2,19:20:57.14:704,57,0	1/1:6,20:26:27.41:334,27,0	1/1:0,12:12:36.12:453,36,0	1/1:0,17:17:35.64:348,36,0	0/0:6,0:15:13.56:0,14,46	1/1:0,22:22:50.81:597,51,0	1/1:0,14:14:14.76:148,15,0	1/1:0,15:15:35.90:392,36,0	1/1:0,18:18:41.74:481,42,0	1/1:1,7:8:11.77:131,12,0	1/1:3,8:10:15.01:186,15,0	1/1:5,15:19:42.03:501,42,0	1/1:0,14:14:38.98:450,39,0	1/1:0,23:23:26.84:321,27,0	1/1:0,18:18:38.24:383,38,0	0/0:7,0:21:20.51:0,21,71	0/0:4,0:17:20.42:0,20,84	1/1:0,14:14:32.85:336,33,0	1/1:1,18:19:51.11:604,51,0	1/1:0,12:12:33.04:389,33,0	1/1:1,9:10:26.90:283,27,0
chr10	40648975	.	TAA	T	7332.91	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=13.437;DP=642;FS=21.944;HRun=10;HaplotypeScore=84.7078;InbreedingCoeff=0.9926;MQ=78.35;MQ0=0;MQRankSum=0.713;QD=26.57;ReadPosRankSum=-0.274;VQSLOD=2.9473;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,102,1554	1/1:3,16:19:38.97:435,39,0	0/0:22,0:19:9.63:0,10,417	0/0:16,0:16:28.89:0,29,383	0/0:26,0:27:59.69:0,60,911	0/0:22,0:22:54.18:0,54,850	0/0:20,0:20:54.18:0,54,855	1/1:9,39:48:99:1284,117,0	0/0:15,0:16:44.64:0,45,674	1/1:4,18:22:51.13:568,51,0	1/1:0,16:16:38.14:433,38,0	0/0:22,0:22:66.23:0,66,1046	0/0:27,0:27:75.24:0,75,1168	0/0:20,0:20:57.17:0,57,877	0/0:26,0:26:75.26:0,75,1190	0/0:15,0:15:45.14:0,45,694	0/0:34,0:34:90.29:0,90,1407	1/1:2,20:22:57.15:635,57,0	1/1:0,22:22:66.17:730,66,0	1/1:5,18:24:38.98:480,39,0	1/1:2,17:20:30.01:393,30,0	0/0:16,0:16:42.14:0,42,661	0/0:24,0:24:66.21:0,66,1012	0/0:23,0:23:66.18:0,66,1020	1/1:3,21:24:48.12:535,48,0	1/1:1,28:29:84.23:936,84,0	1/1:2,14:16:39.09:435,39,0	1/1:0,14:14:42.11:468,42,0
chr10	40651267	.	AG	A	1797.24	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.725;DP=657;FS=3.930;HRun=5;HaplotypeScore=66.7626;InbreedingCoeff=0.9993;MQ=78.93;MQ0=0;MQRankSum=-1.482;QD=25.31;ReadPosRankSum=2.435;VQSLOD=3.4243;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:93.10:0,93,1241	0/0:14,0:14:39.13:0,39,533	0/0:22,0:20:50.99:0,51,645	0/0:12,0:12:30.10:0,30,403	0/0:26,0:26:75.24:0,75,1006	0/0:19,0:19:54.16:0,54,707	0/0:26,0:26:78.24:0,78,1036	0/0:29,0:29:78.26:0,78,1067	0/0:24,0:24:69.22:0,69,926	0/0:23,0:22:60.20:0,60,819	0/0:12,0:12:27.08:0,27,354	1/1:1,26:27:66.15:749,66,0	0/0:25,0:25:66.20:0,66,884	0/0:31,0:31:93.31:0,93,1269	0/0:30,0:30:87.28:0,87,1174	0/0:27,0:27:81.23:0,81,1087	0/0:28,0:28:81.23:0,81,1085	0/0:15,0:15:36.12:0,36,492	0/0:19,0:19:57.19:0,57,779	0/0:19,0:19:48.16:0,48,655	0/0:50,0:50:99:0,144,1936	0/0:29,0:29:87.26:0,87,1155	1/1:1,19:20:45.13:511,45,0	1/1:0,24:24:60.17:681,60,0	0/0:22,0:22:66.21:0,66,885	0/0:14,0:14:33.11:0,33,452	0/0:23,0:23:69.23:0,69,942	0/0:15,0:15:45.15:0,45,613
chr10	40652646	.	G	GGTGT	6298.23	PASS	AB=0.680;AC=51;AF=0.944;AN=54;BaseQRankSum=0.709;DP=712;FS=7.976;HRun=0;HaplotypeScore=187.7625;InbreedingCoeff=0.2534;MQ=62.62;MQ0=20;MQRankSum=0.577;QD=9.78;ReadPosRankSum=-0.180;VQSLOD=3.4535;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,2:33:9.39:147,9,0	1/1:7,0:11:8.62:156,9,0	./.	0/0:35,0:26:2.74:0,3,27	1/1:9,5:14:3.01:71,3,0	1/1:19,0:25:9.03:156,9,0	1/1:26,1:30:9.03:134,9,0	1/1:24,0:23:15.03:185,15,0	1/1:13,1:19:18.06:311,18,0	1/1:31,0:30:37:580,37,0	1/1:13,0:17:0.47:1,0,0	1/1:9,1:22:24.08:436,24,0	1/1:30,0:31:15.04:246,15,0	1/1:22,0:21:12.91:170,13,0	1/1:15,8:26:17.80:369,18,0	1/1:9,4:14:20.54:344,21,0	1/1:13,16:29:35.64:696,36,0	1/1:13,0:17:3.01:52,3,0	1/1:25,0:24:18.06:288,18,0	1/1:16,0:20:5.93:104,6,0	1/1:28,0:30:12.04:215,12,0	1/1:23,0:32:9.03:156,9,0	1/1:16,1:31:8.73:211,9,0	0/1:18,1:34:29.63:220,0,30	1/1:13,1:18:3.01:52,3,0	1/1:37,0:37:32.37:468,32,0	1/1:19,0:27:21.07:365,21,0	1/1:5,0:6:12.04:162,12,0
chr10	40654335	.	A	AGT	3991.43	PASS	AB=0.704;AC=36;AF=0.643;AN=56;BaseQRankSum=3.122;DP=806;FS=2.875;HRun=0;HaplotypeScore=146.7571;InbreedingCoeff=0.6813;MQ=60.67;MQ0=20;MQRankSum=-3.111;QD=7.14;ReadPosRankSum=4.077;VQSLOD=3.2191;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:37,0:39:10.13:80,10,0	1/1:5,7:12:15.05:227,15,0	0/0:60,0:22:13.90:0,14,118	0/1:68,0:27:2.60:3,0,34	1/1:10,0:31:9.33:73,9,0	1/1:18,0:36:17.25:124,17,0	1/1:10,0:23:9:78,9,0	0/0:32,0:32:45.16:0,45,482	1/1:19,1:33:9.46:77,9,0	1/1:8,14:22:7.32:570,7,0	0/1:11,14:25:42.55:299,0,43	1/1:11,0:24:22.81:188,23,0	1/1:4,2:16:14.66:152,15,0	1/1:8,0:19:18:157,18,0	1/1:19,0:39:26.88:219,27,0	1/1:8,0:18:11.73:87,12,0	1/1:11,1:24:8.94:67,9,0	0/1:6,14:20:1.71:435,0,2	0/0:11,0:11:11.99:0,12,124	0/0:24,0:25:50.96:0,51,557	0/0:57,0:63:99:0,125,1373	1/1:12,0:26:9.61:90,10,0	1/1:5,0:15:12.67:90,13,0	1/1:17,0:28:9:107,9,0	0/1:12,27:40:3.41:870,0,3	0/0:18,0:22:42.48:0,42,381	0/0:21,0:22:19.40:0,19,323	0/0:12,0:12:20.89:0,21,223
chr10	40657952	.	G	GT	877.61	PASS	AB=0.960;AC=5;AF=0.089;AN=56;BaseQRankSum=-2.907;DP=758;FS=9.826;HRun=10;HaplotypeScore=82.5381;InbreedingCoeff=0.8443;MQ=77.93;MQ0=0;MQRankSum=-2.055;QD=12.19;ReadPosRankSum=0.122;VQSLOD=2.4979;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:44,3:48:34.61:0,35,875	0/0:9,0:10:26:0,26,203	0/0:36,0:36:33.04:0,33,338	0/0:20,0:18:9.83:0,10,155	0/0:24,0:24:50.65:0,51,406	0/0:31,0:31:80.88:0,81,662	0/0:38,1:40:32.50:0,32,758	0/0:35,0:35:69.29:0,69,656	0/0:24,0:25:55.90:0,56,444	0/0:36,0:37:94.89:0,95,765	0/0:21,1:22:21.92:0,22,383	0/0:29,0:29:66.80:0,67,562	1/1:3,23:28:41.08:551,41,0	1/1:1,19:20:41.96:447,42,0	0/0:24,0:24:53.88:0,54,439	0/0:30,1:31:48.83:0,49,594	0/0:34,0:35:94.85:0,95,759	0/0:21,0:21:62.84:0,63,506	0/1:23,1:24:1.02:1,0,273	0/0:28,0:28:62.87:0,63,513	0/0:30,0:30:65.25:0,65,525	0/0:17,0:17:44.87:0,45,362	0/0:14,0:14:35.95:0,36,295	0/0:22,0:22:53.93:0,54,443	0/0:27,0:27:45.85:0,46,571	0/0:35,0:35:77.88:0,78,638	0/0:33,0:33:89.86:0,90,734	0/0:11,0:11:26.94:0,27,222
chr10	40659199	.	A	AAG	92.99	PASS	AB=0.946;AC=5;AF=0.089;AN=56;BaseQRankSum=9.284;DP=1125;FS=30.021;HRun=0;HaplotypeScore=427.8926;InbreedingCoeff=0.0704;MQ=32.59;MQ0=82;MQRankSum=-7.235;QD=0.63;ReadPosRankSum=-0.713;VQSLOD=0.8061;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:49:84.46:0,84,1223	0/0:20,0:18:29.27:0,29,398	0/0:49,0:2:6.02:0,6,97	0/0:53,0:7:21.06:0,21,312	0/0:44,0:39:42.01:0,42,671	0/1:33,2:32:53.57:54,0,363	0/1:60,1:57:24.12:24,0,960	0/1:27,3:22:99:109,0,443	0/0:32,2:34:49.20:0,49,619	0/0:70,1:61:80.44:0,80,1841	0/0:26,0:24:6.81:0,7,315	0/0:63,0:59:84.86:0,85,1528	0/0:50,0:44:60.58:0,61,1034	0/0:66,0:64:99:0,115,1537	0/0:64,1:63:64.39:0,64,968	0/0:40,3:38:40.08:0,40,780	0/0:40,0:38:47.52:0,48,944	0/0:30,0:26:77.91:0,78,1121	0/0:17,0:4:5.98:0,6,47	0/0:14,0:13:2.60:0,3,39	1/1:20,2:15:0.15:12,0,0	0/0:57,0:53:71.61:0,72,1159	0/0:37,0:35:25.55:0,26,422	0/0:64,0:63:67:0,67,996	0/0:41,0:42:50.08:0,50,819	0/0:20,0:17:16.11:0,16,264	0/0:11,0:8:4.89:0,5,111	0/0:8,0:6:5.75:0,6,43
chr10	40659205	.	AC	A	3721.89	PASS	AB=0.787;AC=25;AF=0.446;AN=56;BaseQRankSum=18.869;DP=1131;FS=217.986;HRun=2;HaplotypeScore=370.9050;InbreedingCoeff=-0.4451;MQ=33.96;MQ0=77;MQRankSum=-14.409;QD=4.67;ReadPosRankSum=3.774;VQSLOD=-0.6635;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:42,7:48:44.81:45,0,982	0/1:17,5:20:99:116,0,386	0/0:56,0:4:12.04:0,12,169	0/0:63,0:10:26.12:0,26,342	0/1:36,9:40:51.37:51,0,648	0/1:22,15:34:99:203,0,386	0/0:54,11:62:32.15:0,32,1306	0/1:23,9:23:99:262,0,223	0/1:22,12:34:99:182,0,520	0/1:55,17:61:99:467,0,1286	0/1:20,6:24:40.20:40,0,290	0/1:47,15:58:99:247,0,1339	0/1:38,11:44:99:192,0,938	0/1:52,12:62:99:149,0,1220	0/1:37,26:60:99:582,0,712	0/1:27,15:37:99:214,0,638	0/1:32,6:36:99:131,0,828	0/0:29,1:26:51.21:0,51,958	1/1:8,2:4:5.50:46,6,0	0/1:7,6:12:25.61:26,0,35	0/1:15,7:16:17.64:107,0,18	0/0:50,4:51:32.03:0,32,1095	0/1:33,6:36:85.32:85,0,342	0/0:55,10:64:89.98:0,90,1086	0/1:30,10:40:99:106,0,724	0/1:10,7:16:99:258,0,113	1/1:10,1:8:1.66:151,2,0	1/1:5,3:6:6:61,6,0
chr10	40659206	.	C	CA	3798.94	PASS	AB=0.971;AC=26;AF=0.464;AN=56;BaseQRankSum=18.207;DP=1137;FS=225.677;HRun=1;HaplotypeScore=378.1652;InbreedingCoeff=-0.4592;MQ=34.13;MQ0=76;MQRankSum=-12.129;QD=4.39;ReadPosRankSum=2.941;VQSLOD=-0.5990;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:49,0:49:41.39:41,0,940	0/1:22,1:21:99:148,0,362	0/0:57,0:4:12.04:0,12,162	0/0:66,0:10:23.20:0,23,326	0/1:44,1:41:51.08:51,0,603	0/1:38,0:35:99:223,0,372	0/1:65,0:62:16.47:16,0,1256	0/1:30,0:22:99:309,0,206	0/1:34,0:34:99:192,0,502	0/1:66,4:60:99:463,0,1180	0/1:25,1:25:51.26:51,0,259	0/1:62,0:58:99:254,0,1243	0/1:50,0:46:99:158,0,898	0/1:64,0:62:99:147,0,1156	0/1:62,0:61:99:542,0,670	0/1:42,1:38:99:189,0,592	0/1:38,1:36:99:163,0,796	0/0:30,0:27:42.49:0,42,877	1/1:10,0:4:1.70:40,2,0	0/1:12,0:11:18.85:19,0,46	1/1:22,0:16:10.63:128,11,0	0/0:52,2:51:46.27:0,46,1043	0/1:37,2:37:83.81:84,0,323	0/0:64,1:63:75.93:0,76,1012	0/1:37,1:38:94.33:94,0,678	0/1:16,1:16:99:264,0,100	0/1:9,1:7:1.51:160,0,2	1/1:8,0:6:6:62,6,0
chr10	40659210	.	ATAC	A	694.12	PASS	AB=0.983;AC=13;AF=0.232;AN=56;BaseQRankSum=13.651;DP=1166;FS=63.728;HRun=0;HaplotypeScore=407.2982;InbreedingCoeff=0.0230;MQ=34.54;MQ0=71;MQRankSum=-10.763;QD=2.13;ReadPosRankSum=0.605;VQSLOD=-0.5310;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:54,1:54:90.52:0,91,2082	0/0:27,1:26:39.33:0,39,940	0/0:65,0:4:9.03:0,9,210	0/0:72,0:11:27.98:0,28,623	0/0:43,0:41:27.10:0,27,1357	0/1:39,0:36:2.63:3,0,733	0/0:64,3:66:75.06:0,75,2785	0/1:27,0:19:9.28:9,0,409	0/0:34,1:35:58.75:0,59,1295	0/1:70,1:60:99:173,0,2513	0/0:27,0:25:32.29:0,32,568	0/0:60,0:57:99:0,118,2459	0/1:50,1:47:25.69:26,0,1992	0/0:65,0:64:99:0,126,2594	0/0:62,0:59:77.39:0,77,1828	0/0:43,0:39:52.91:0,53,1422	0/1:41,1:39:64.79:65,0,1662	0/0:33,0:30:55.50:0,55,2004	0/1:9,0:4:28.72:35,0,29	0/1:11,0:10:50.72:62,0,51	0/0:22,0:16:3.33:0,3,151	0/0:55,0:54:29.98:0,30,1995	0/1:40,0:38:77.11:77,0,770	0/0:64,0:64:65.20:0,65,1749	0/0:36,1:38:32.07:0,32,1367	0/1:16,0:16:83.86:84,0,287	1/1:9,1:7:20.75:244,21,0	1/1:6,2:6:0.13:70,0,0
chr10	40659212	.	AC	A	738.24	PASS	AB=0.886;AC=11;AF=0.196;AN=56;BaseQRankSum=12.953;DP=1184;FS=49.962;HRun=2;HaplotypeScore=398.6739;InbreedingCoeff=-0.0350;MQ=34.70;MQ0=64;MQRankSum=-10.015;QD=2.67;ReadPosRankSum=1.433;VQSLOD=-0.6089;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:54,1:54:71.98:0,72,1324	0/0:28,0:26:50.16:0,50,657	0/0:64,1:4:9.03:0,9,130	0/0:74,1:11:27.56:0,28,391	0/0:39,4:42:66.81:0,67,909	0/1:32,7:36:45.56:46,0,429	0/0:66,4:67:84.26:0,84,1772	0/1:24,3:19:94.41:94,0,272	0/0:32,4:36:72.20:0,72,964	0/1:65,9:64:99:254,0,1642	0/0:20,8:26:32.07:0,32,364	0/0:61,1:60:99:0,100,1581	0/0:49,2:48:0.10:0,0,1294	0/0:64,0:63:99:0,128,1738	0/0:58,4:59:99:0,113,1356	0/0:42,4:41:37.94:0,38,955	0/1:41,0:39:3.19:3,0,1044	0/0:33,0:30:71.40:0,71,1240	0/1:8,1:4:24.91:32,0,25	0/1:9,3:10:24.70:52,0,25	0/0:19,3:16:8.87:0,9,175	0/0:56,2:56:36.85:0,37,1232	0/1:31,9:38:34.32:34,0,468	0/0:65,4:67:71.59:0,72,1149	0/0:35,4:39:18.26:0,18,830	0/1:14,4:16:99:103,0,242	1/1:5,4:8:20.80:224,21,0	0/1:7,0:6:21.96:45,0,22
chr10	40659213	.	C	CA	696.45	PASS	AB=0.947;AC=11;AF=0.196;AN=56;BaseQRankSum=12.397;DP=1205;FS=47.733;HRun=1;HaplotypeScore=414.0895;InbreedingCoeff=0.0830;MQ=34.63;MQ0=64;MQRankSum=-9.581;QD=2.65;ReadPosRankSum=0.448;VQSLOD=-0.4962;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:55:69.07:0,69,1206	0/0:29,0:26:50.16:0,50,614	0/0:66,0:4:9.03:0,9,124	0/0:76,0:11:24.31:0,24,365	0/0:43,2:44:69.08:0,69,869	0/1:38,1:36:25.74:26,0,444	0/0:70,0:67:99:0,105,1688	0/0:25,1:19:0.28:0,0,298	0/0:37,0:37:64.66:0,65,901	0/1:69,5:66:99:219,0,1557	0/0:27,0:26:7.74:0,8,314	0/0:63,1:62:99:0,114,1490	0/0:52,1:50:10.84:0,11,1195	0/0:66,0:64:99:0,127,1615	0/0:60,0:58:59.73:0,60,1197	0/0:45,1:41:10.94:0,11,924	0/1:39,2:39:49.44:49,0,965	0/0:32,1:30:43.87:0,44,1132	0/1:10,1:6:22.39:38,0,22	0/1:17,0:15:18.87:110,0,19	0/0:19,0:15:9.59:0,10,155	0/0:54,3:56:23.44:0,23,1145	0/1:39,4:40:42.71:43,0,446	0/0:68,0:66:63.75:0,64,1108	0/0:36,1:37:44.28:0,44,778	0/1:18,1:17:99:109,0,220	1/1:8,2:8:20.40:205,20,0	1/1:7,0:6:1.17:47,1,0
chr10	40659222	.	CAA	C	492.70	PASS	AB=0.929;AC=12;AF=0.214;AN=56;BaseQRankSum=16.324;DP=1304;FS=74.361;HRun=3;HaplotypeScore=449.0608;InbreedingCoeff=0.3782;MQ=35.33;MQ0=61;MQRankSum=-12.093;QD=1.96;ReadPosRankSum=2.651;VQSLOD=0.1971;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:58,1:58:99:0,113,1899	0/0:28,0:27:28.13:0,28,721	0/0:65,0:5:9:0,9,137	0/0:77,0:11:22.88:0,23,372	0/0:56,1:56:62:0,62,1277	0/0:39,0:38:31.87:0,32,635	0/0:73,0:70:99:0,153,2388	0/1:19,0:12:25.29:42,0,25	0/0:42,0:42:50.82:0,51,1138	0/1:85,2:77:94.50:95,0,1836	0/0:30,5:34:32.25:0,32,449	0/0:67,0:66:99:0,129,1992	0/0:56,0:55:32.65:0,33,1614	0/0:70,0:68:99:0,151,2188	0/0:63,0:61:99:0,107,1653	0/0:49,0:46:25.73:0,26,1363	0/0:49,0:46:88.30:0,88,1632	0/0:36,0:34:75.63:0,76,1598	0/1:17,0:6:7.08:36,0,7	1/1:18,4:20:21.67:142,22,0	0/1:20,1:14:3.16:3,0,39	0/0:67,0:66:73.84:0,74,1711	0/1:38,7:44:20.91:21,0,722	0/0:76,0:75:99:0,122,1587	0/0:40,3:43:61.63:0,62,1080	0/1:18,2:18:29.33:140,0,29	1/1:4,4:8:19.78:125,20,0	1/1:6,0:5:7.54:51,8,0
chr10	40659224	.	A	AC	673.38	PASS	AB=0.958;AC=10;AF=0.179;AN=56;BaseQRankSum=13.467;DP=1334;FS=19.468;HRun=0;HaplotypeScore=462.1836;InbreedingCoeff=0.0234;MQ=35.42;MQ0=58;MQRankSum=-10.262;QD=3.09;ReadPosRankSum=-0.180;VQSLOD=1.7969;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:59,0:58:99:0,126,1616	0/1:26,1:26:21.32:21,0,516	0/0:63,0:5:9.03:0,9,126	0/0:78,0:11:17.51:0,18,288	0/0:58,1:57:60.18:0,60,1025	0/0:39,0:38:40.42:0,40,556	0/0:72,0:69:99:0,117,1800	0/1:22,1:14:55.47:55,0,68	0/0:44,0:44:51.41:0,51,928	0/0:88,0:77:49.23:0,49,2018	0/1:32,2:34:36.86:37,0,448	0/0:67,0:66:99:0,147,1743	0/0:57,0:56:80.22:0,80,1458	0/0:73,0:70:99:0,157,1844	0/0:68,0:65:99:0,112,1576	0/0:47,1:45:50.12:0,50,1152	0/0:48,0:45:99:0,122,1504	0/0:37,0:35:88.87:0,89,1186	0/1:21,0:7:12.92:96,0,13	1/1:13,8:20:16.17:239,16,0	0/0:20,0:13:5.89:0,6,154	0/0:69,2:70:59.34:0,59,1291	0/1:49,1:47:97.68:98,0,672	0/0:79,0:79:85.20:0,85,1141	0/0:45,1:46:67.35:0,67,988	0/1:25,1:23:99:107,0,108	0/1:10,0:9:18.26:159,0,18	0/1:5,1:5:9.76:10,0,46
chr10	40659247	.	C	CAT	74.25	PASS	AB=0.900;AC=4;AF=0.071;AN=56;BaseQRankSum=6.793;DP=1475;FS=5.772;HRun=0;HaplotypeScore=543.6263;InbreedingCoeff=-0.0817;MQ=36.56;MQ0=84;MQRankSum=-6.328;QD=1.03;ReadPosRankSum=-3.113;VQSLOD=-0.6545;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:76,0:75:99:0,159,2174	0/0:23,0:22:47.89:0,48,531	0/0:82,0:6:8.22:0,8,132	0/0:86,0:18:50.50:0,51,522	0/0:66,1:63:92.32:0,92,915	0/0:40,0:40:51.99:0,52,615	0/0:74,1:71:99:0,162,1819	0/1:15,1:10:30.06:30,0,242	0/0:55,1:54:99:0,104,1119	0/0:85,1:72:99:0,134,1955	0/0:37,0:36:24.36:0,24,513	0/0:61,0:61:99:0,112,1511	0/0:50,1:51:73.51:0,74,1573	0/0:73,0:70:99:0,150,2004	0/0:68,0:65:99:0,119,1565	0/0:46,0:44:91.06:0,91,1301	0/0:61,0:58:99:0,141,1970	0/0:45,0:45:99:0,123,1606	0/0:23,0:8:16.16:0,16,139	0/0:32,0:30:12.87:0,13,216	0/0:24,0:14:16.12:0,16,130	0/0:82,0:81:99:0,135,1543	0/0:62,0:60:95.67:0,96,1092	0/0:91,0:90:99:0,145,2006	0/0:54,0:54:68.01:0,68,1206	0/1:34,1:30:50.57:51,0,396	0/1:14,1:14:30.34:30,0,131	0/1:4,2:6:71.25:73,0,71
chr10	40659268	.	C	CAT	309.82	PASS	AB=0.923;AC=9;AF=0.161;AN=56;BaseQRankSum=11.767;DP=1402;FS=8.706;HRun=0;HaplotypeScore=488.6717;InbreedingCoeff=0.1290;MQ=40.06;MQ0=70;MQRankSum=-8.248;QD=1.56;ReadPosRankSum=1.993;VQSLOD=-0.1894;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:77,0:76:99:0,164,2276	0/0:20,1:21:27.04:0,27,373	0/0:80,0:6:15.03:0,15,122	0/0:107,0:28:48.70:0,49,724	0/0:50,7:55:28.23:0,28,769	0/0:45,0:43:99:0,108,1424	0/0:74,1:71:99:0,135,1773	0/1:11,0:8:15.87:16,0,84	0/0:54,1:54:77.29:0,77,1556	0/1:63,2:57:3.26:3,0,1493	0/1:32,2:33:22.44:22,0,273	0/0:48,1:49:98.96:0,99,1270	0/0:48,0:48:99:0,107,1541	0/0:67,1:66:99:0,135,1676	0/0:63,3:64:99:0,123,1605	0/0:45,0:45:96.12:0,96,1278	0/0:65,0:63:99:0,139,2070	0/0:47,0:47:99:0,108,1473	1/1:11,1:4:6.01:64,6,0	0/1:27,2:29:54.64:55,0,144	0/1:11,2:8:0:0,0,0	0/0:73,3:75:12.63:0,13,1225	0/0:54,7:60:32.76:0,33,897	0/0:96,0:95:99:0,144,2069	0/0:53,7:60:61.36:0,61,1085	0/1:20,3:23:99:153,0,213	0/1:10,2:10:22.82:126,0,23	0/0:4,0:4:11.56:0,12,64
chr10	40659271	.	ACATG	A	1225.43	PASS	AB=0.811;AC=11;AF=0.196;AN=56;BaseQRankSum=13.974;DP=1377;FS=19.638;HRun=0;HaplotypeScore=478.2750;InbreedingCoeff=0.2691;MQ=40.46;MQ0=64;MQRankSum=-9.871;QD=5.00;ReadPosRankSum=1.545;VQSLOD=-0.1125;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:74,0:73:99:0,167,4189	0/0:20,0:19:24.42:0,24,652	0/1:83,0:5:2.05:2,0,133	0/0:109,0:29:79.97:0,80,1660	0/0:54,1:52:31.38:0,31,1538	0/0:45,0:43:79.52:0,80,2518	0/0:78,0:74:99:0,140,3323	0/1:3,3:4:27.65:175,0,28	0/0:56,0:55:99:0,126,2935	0/0:61,1:55:31.51:0,32,2908	0/0:31,0:30:8.46:0,8,589	0/0:49,0:49:85.26:0,85,2245	0/0:47,0:47:99:0,111,2809	0/0:65,0:64:99:0,132,3048	0/0:61,0:59:99:0,120,2861	0/0:46,0:46:83.31:0,83,2485	0/0:65,0:64:99:0,156,3792	0/0:46,0:46:99:0,120,2812	1/1:11,1:3:5.91:38,6,0	0/1:13,15:28:13.97:365,0,14	0/1:14,0:10:0:1,0,0	0/1:66,2:68:58.07:58,0,2259	0/0:59,0:58:46.32:0,46,1745	0/0:103,0:102:99:0,152,3713	0/0:60,1:61:12.26:0,12,1891	0/1:13,8:21:99:392,0,148	1/1:4,5:8:23.40:285,23,0	0/1:2,2:4:26.72:57,0,27
chr10	40659272	.	CATGT	C	1020.30	PASS	AB=0.986;AC=14;AF=0.250;AN=56;BaseQRankSum=13.444;DP=1348;FS=17.726;HRun=0;HaplotypeScore=465.8736;InbreedingCoeff=0.2667;MQ=40.55;MQ0=62;MQRankSum=-9.102;QD=3.32;ReadPosRankSum=1.179;VQSLOD=-0.4053;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:73,0:72:99:0,165,3716	0/0:20,0:19:8.58:0,9,617	0/0:83,0:5:10.99:0,11,136	0/0:108,0:29:74.12:0,74,1595	0/0:55,0:53:27.50:0,28,1467	0/0:44,0:42:58.61:0,59,2195	0/0:75,0:71:99:0,112,2786	0/1:5,0:4:7.96:119,0,8	0/0:56,0:55:99:0,118,2569	0/1:60,0:53:13.06:13,0,2473	0/1:30,1:30:7.25:7,0,493	0/0:46,0:46:79.32:0,79,1951	0/0:44,0:44:99:0,111,2490	0/0:64,1:64:99:0,131,2624	0/0:58,0:57:99:0,120,2581	0/0:44,0:44:65.43:0,65,2282	0/0:64,0:63:99:0,147,3247	0/0:46,0:46:87.93:0,88,2432	1/1:10,0:3:6.01:67,6,0	0/1:27,0:27:21.30:257,0,21	0/1:14,0:10:0:1,0,0	0/1:66,1:67:55.52:56,0,2032	0/0:57,0:56:57.55:0,58,1648	0/0:100,0:99:99:0,141,3284	0/1:59,1:60:48.34:48,0,1586	0/1:19,1:20:99:330,0,100	1/1:9,0:8:20.96:251,21,0	1/1:4,0:4:5.77:31,6,0
chr10	40659273	.	ATG	A	1188.39	PASS	AB=0.970;AC=18;AF=0.321;AN=56;BaseQRankSum=14.668;DP=1320;FS=6.632;HRun=0;HaplotypeScore=426.7958;InbreedingCoeff=0.3177;MQ=41.44;MQ0=59;MQRankSum=-10.057;QD=2.78;ReadPosRankSum=3.062;VQSLOD=0.6592;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:74,0:73:99:0,164,2557	0/0:18,0:18:13.45:0,13,418	0/1:81,1:5:24.29:24,0,79	0/0:107,0:30:79.51:0,80,1191	0/0:52,0:51:13.60:0,14,1011	0/0:44,0:42:99:0,102,1571	0/0:77,0:73:99:0,140,2061	1/1:6,0:4:9.01:81,9,0	0/0:56,0:55:99:0,111,1748	0/1:56,1:52:99:101,0,1565	0/1:28,0:29:29.31:29,0,305	0/0:46,0:46:83.15:0,83,1376	0/0:44,0:44:99:0,111,1711	0/0:63,1:63:99:0,128,1856	0/0:59,0:58:99:0,119,1816	0/0:40,0:40:99:0,102,1611	0/0:62,1:62:99:0,140,2074	0/0:45,0:45:99:0,111,1637	1/1:9,0:3:6.02:75,6,0	1/1:20,2:25:5.17:243,5,0	0/1:10,0:8:0:0,0,0	0/1:64,0:65:91.73:92,0,1395	0/1:53,2:55:44.59:45,0,949	0/0:100,0:99:99:0,130,2219	0/1:56,2:59:48.95:49,0,1060	0/1:17,0:18:22.33:363,0,22	1/1:8,0:8:22.58:225,23,0	1/1:2,0:2:5.86:35,6,0
chr10	40659274	.	TGTAC	T	1215.90	PASS	AB=0.862;AC=13;AF=0.232;AN=56;BaseQRankSum=12.035;DP=1304;FS=15.280;HRun=0;HaplotypeScore=443.1017;InbreedingCoeff=0.2666;MQ=41.42;MQ0=62;MQRankSum=-6.644;QD=3.96;ReadPosRankSum=1.779;VQSLOD=0.5552;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:71,2:73:99:0,165,3913	0/0:19,1:19:5.36:0,5,633	0/0:82,0:5:4.65:0,5,111	0/0:109,0:31:76.59:0,77,1702	0/1:43,9:52:5.89:6,0,1561	0/0:42,1:41:99:0,103,2448	0/0:75,1:72:99:0,135,2954	1/1:5,0:3:9.01:81,9,0	0/0:54,1:53:99:0,126,2700	0/1:54,3:52:99:105,0,2440	0/0:25,2:27:5.87:0,6,520	0/0:43,2:45:82.13:0,82,2058	0/0:44,0:44:99:0,111,2567	0/0:62,1:62:99:0,128,2707	0/0:54,4:57:99:0,119,2763	0/0:40,1:41:99:0,102,2468	0/0:61,0:61:99:0,147,3191	0/0:42,0:42:99:0,111,2568	1/1:7,2:3:6.02:104,6,0	0/1:21,3:25:75.53:198,0,76	0/1:5,3:6:0:0,0,0	0/1:56,5:65:99:150,0,2174	0/0:44,7:52:48.18:0,48,1679	0/0:100,0:99:99:0,145,3526	0/1:49,9:57:14.17:14,0,1718	0/1:12,4:18:99:395,0,105	1/1:6,1:9:8.02:313,8,0	0/0:2,0:2:2.70:0,3,7
chr10	40659276	.	T	TAC	12750.78	PASS	AB=0.791;AC=29;AF=0.537;AN=54;BaseQRankSum=3.510;DP=1354;FS=1.534;HRun=0;HaplotypeScore=400.7181;InbreedingCoeff=-0.5567;MQ=41.26;MQ0=64;MQRankSum=-8.501;QD=11.07;ReadPosRankSum=-1.267;VQSLOD=3.5651;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:50,25:74:99:981,0,909	0/1:16,9:24:26.05:26,0,224	0/0:81,0:5:6.89:0,7,65	0/0:112,0:31:61.42:0,61,690	0/1:43,11:53:99:259,0,492	0/1:31,18:45:99:735,0,573	0/1:54,22:71:99:857,0,562	1/1:6,0:4:2.74:12,3,0	0/1:36,22:55:99:841,0,515	0/1:47,15:57:99:723,0,434	0/1:21,8:29:37.33:396,0,37	0/1:33,14:47:99:612,0,443	0/1:32,14:46:99:561,0,553	0/1:43,21:64:99:1029,0,432	0/1:42,20:61:99:686,0,711	0/1:31,12:42:99:472,0,660	0/1:44,19:62:99:819,0,599	0/1:26,16:42:99:690,0,533	1/1:10,0:3:4.51:23,5,0	0/1:27,0:26:5.09:49,0,5	./.	0/1:50,16:66:99:502,0,543	0/1:42,12:53:99:571,0,365	0/1:65,36:100:99:923,0,865	0/1:44,15:58:99:761,0,289	1/1:19,0:19:17.20:125,17,0	1/1:10,0:9:15.60:100,16,0	0/1:4,0:4:0.37:1,0,0
chr10	40659280	.	C	CATAA	3648.51	PASS	AB=0.975;AC=18;AF=0.321;AN=56;BaseQRankSum=16.821;DP=1417;FS=41.477;HRun=0;HaplotypeScore=529.1814;InbreedingCoeff=0.3140;MQ=40.22;MQ0=63;MQRankSum=-12.002;QD=7.73;ReadPosRankSum=-5.610;VQSLOD=0.0173;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:74,0:73:99:0,123,2035	0/0:25,0:24:17.92:0,18,542	0/0:77,0:5:6.91:0,7,104	0/0:107,0:28:74.83:0,75,1218	0/1:57,1:57:99:170,0,852	0/0:51,0:48:74.46:0,74,1268	0/0:73,0:68:99:0,105,1448	0/1:10,0:6:10.08:79,0,10	0/0:61,0:58:91.10:0,91,1281	0/1:70,0:64:99:392,0,1426	0/1:34,0:34:99:100,0,137	0/0:48,0:47:86.51:0,87,1042	0/0:46,0:45:98.06:0,98,1323	0/0:63,0:62:83.32:0,83,1201	0/0:63,0:62:51.47:0,51,1505	0/0:45,0:44:97.71:0,98,1402	0/0:65,0:64:99:0,136,1711	0/0:43,0:43:99:0,112,1431	1/1:15,0:9:23.98:414,24,0	1/1:29,1:30:19.39:356,19,0	1/1:12,0:10:8.93:92,9,0	0/1:67,4:71:99:378,0,1195	0/1:58,2:58:99:228,0,823	0/0:102,0:101:99:0,157,2192	0/1:63,0:63:99:201,0,835	0/1:21,2:23:58.13:604,0,58	1/1:15,1:15:23.72:557,24,0	1/1:8,0:8:7.59:77,8,0
chr10	40659281	.	A	AAG	3568.61	PASS	AB=0.958;AC=26;AF=0.464;AN=56;BaseQRankSum=17.292;DP=1415;FS=1.153;HRun=0;HaplotypeScore=481.7638;InbreedingCoeff=-0.6411;MQ=40.25;MQ0=64;MQRankSum=-10.814;QD=3.00;ReadPosRankSum=4.799;VQSLOD=0.5010;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:75,0:74:71.21:71,0,1360	0/0:26,0:25:20.35:0,20,469	0/0:76,0:5:8.39:0,8,105	0/0:108,0:28:75.27:0,75,1067	0/1:56,1:56:63.27:63,0,665	0/1:52,0:48:99:118,0,864	0/1:70,0:65:68.80:69,0,961	0/1:9,0:5:33.04:66,0,33	0/1:60,0:57:99:159,0,881	0/1:68,2:64:99:214,0,1164	0/1:25,9:34:63.45:295,0,63	0/1:47,0:46:99:103,0,699	0/1:48,0:47:91.75:92,0,916	0/1:62,0:61:99:187,0,771	0/1:62,0:61:99:107,0,1089	0/1:45,0:43:44.23:44,0,979	0/1:65,0:64:23.46:23,0,1153	0/1:42,0:42:1.32:1,0,946	1/1:17,0:11:2.54:84,3,0	1/1:18,0:31:0.82:364,1,0	0/0:14,0:12:2.96:0,3,20	0/1:66,4:70:99:234,0,929	0/1:51,8:58:99:550,0,614	0/1:101,0:100:35.14:35,0,1463	0/1:62,3:64:99:230,0,607	0/1:18,0:23:77.87:276,0,78	0/1:15,0:15:11.74:113,0,12	0/1:6,0:8:16.60:71,0,17
chr10	40659301	.	A	AAC	2987.09	PASS	AB=0.924;AC=17;AF=0.315;AN=54;BaseQRankSum=9.385;DP=1433;FS=23.400;HRun=0;HaplotypeScore=499.3419;InbreedingCoeff=0.4586;MQ=39.39;MQ0=89;MQRankSum=-9.025;QD=5.80;ReadPosRankSum=-3.603;VQSLOD=0.9734;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:75,2:73:35.57:0,36,1346	0/0:29,2:30:6.46:0,6,453	./.	0/1:70,0:15:0.06:0,0,128	0/0:53,7:59:22.20:0,22,345	0/0:57,1:54:75.43:0,75,1334	0/0:75,0:72:99:0,132,1512	0/1:26,2:21:30.58:273,0,31	0/0:55,0:52:98.32:0,98,1211	0/1:63,5:61:99:330,0,1030	0/0:32,3:33:32.18:0,32,408	0/0:44,3:45:74.39:0,74,795	0/0:46,0:44:31.48:0,31,830	0/0:47,3:49:18.62:0,19,930	0/1:59,4:63:67.91:68,0,1099	0/0:49,1:44:83.65:0,84,909	0/0:57,1:56:64.33:0,64,1313	0/0:46,0:45:99:0,111,1297	0/1:26,3:14:1.30:173,0,1	1/1:31,6:36:30.31:271,30,0	1/1:19,12:23:29.75:381,30,0	0/0:66,8:75:18.92:0,19,844	0/1:51,6:55:78.02:78,0,538	0/0:100,0:98:99:0,140,1499	0/1:57,9:66:99:380,0,776	1/1:31,7:31:46.10:617,46,0	1/1:8,8:14:22.60:461,23,0	1/1:7,2:9:15.61:138,16,0
chr10	40659313	.	C	CATT	1899.97	PASS	AB=0.888;AC=10;AF=0.185;AN=54;BaseQRankSum=11.852;DP=1393;FS=37.415;HRun=0;HaplotypeScore=511.8871;InbreedingCoeff=-0.2047;MQ=37.59;MQ0=111;MQRankSum=-8.257;QD=4.27;ReadPosRankSum=-3.863;VQSLOD=-0.3611;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:73,0:69:99:0,145,2520	0/1:25,2:27:25.09:25,0,814	./.	0/0:76,0:10:26.61:0,27,297	0/1:44,2:49:99:166,0,530	0/0:52,0:51:99:0,122,2325	0/0:72,0:67:99:0,144,2893	0/0:47,0:35:77.18:0,77,1113	0/0:55,0:50:99:0,114,2032	0/1:58,3:56:85.30:85,0,1919	0/1:34,0:34:49.35:49,0,891	0/0:44,0:42:81.36:0,81,1434	0/0:42,0:39:94.88:0,95,1599	0/0:46,0:44:99:0,106,1784	0/0:52,0:53:99:0,120,2158	0/0:44,0:39:71.40:0,71,1459	0/0:54,0:53:99:0,104,2160	0/0:41,0:41:99:0,120,2148	0/0:24,0:7:19.46:0,19,148	0/1:27,3:31:97.35:540,0,97	0/0:39,0:30:30.23:0,30,244	0/1:61,0:67:7.68:8,0,1473	0/1:46,2:50:97.10:97,0,1160	0/0:99,1:95:99:0,102,2412	0/1:63,2:65:99:288,0,1561	0/1:33,4:29:99:496,0,240	0/0:18,0:16:33.87:0,34,216	0/1:6,3:10:10.26:288,0,10
chr10	40659347	.	TACAC	T	538.09	PASS	AB=0.941;AC=15;AF=0.300;AN=50;BaseQRankSum=-1.736;DP=1094;FS=3.070;HRun=0;HaplotypeScore=346.0182;InbreedingCoeff=-0.0735;MQ=37.13;MQ0=64;MQRankSum=-0.411;QD=1.00;ReadPosRankSum=1.723;VQSLOD=1.7950;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:54,0:54:13.15:13,0,62	0/0:19,1:20:11.25:0,11,91	./.	./.	0/0:26,0:26:5.52:0,6,17	0/1:53,1:48:6.20:48,0,6	0/0:42,1:39:9.46:0,9,91	0/0:51,0:45:3:0,3,25	1/1:41,2:43:15.99:157,16,0	0/0:47,0:37:12.54:0,13,85	0/0:25,0:25:11.17:0,11,108	0/1:34,0:34:12.80:92,0,13	0/1:29,0:29:39.98:43,0,40	0/1:35,1:38:27.07:27,0,72	0/0:40,0:42:10.98:0,11,87	0/1:33,0:34:14.93:15,0,94	0/1:40,2:39:63.48:107,0,63	0/1:36,1:37:13.54:14,0,215	./.	0/0:25,0:23:5.48:0,5,15	0/1:33,0:30:0.11:0,0,0	0/0:47,0:44:3.02:0,3,7	0/1:32,0:34:14.84:19,0,15	0/1:68,1:69:16.72:63,0,17	0/0:39,0:38:1.93:0,2,5	0/0:25,0:21:3.88:0,4,28	1/1:10,0:13:7.57:81,8,0	0/0:12,0:11:5.20:0,5,16
chr10	40661176	.	C	CGTGTGCAGGCACACATATGCACCGT	14480.16	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-2.715;DP=770;FS=4.335;HRun=0;HaplotypeScore=512.8237;InbreedingCoeff=0.9895;MQ=73.61;MQ0=0;MQRankSum=-11.684;QD=135.33;ReadPosRankSum=-0.671;VQSLOD=4.0290;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:87.25:0,87,4174	0/0:9,0:9:24.07:0,24,1241	0/0:22,0:21:13.69:0,14,528	0/0:31,0:30:22.27:0,22,710	0/0:26,0:26:66.23:0,66,3525	1/1:18,7:26:45.11:3869,45,0	1/1:44,0:44:87.17:5736,87,0	0/0:31,0:31:45.05:0,45,1360	1/1:33,2:37:69.19:4875,69,0	0/0:28,0:28:57.19:0,57,2630	0/0:22,0:22:48.16:0,48,2083	0/0:24,0:24:54.17:0,54,2738	0/0:25,0:25:48.11:0,48,2182	0/0:35,0:35:78.21:0,78,3743	0/0:29,0:29:66.20:0,66,3352	0/0:22,0:22:63.22:0,63,3347	0/0:32,0:32:81.26:0,81,4001	0/0:20,0:20:36.12:0,36,1791	0/0:19,0:19:36.11:0,36,1569	0/0:13,0:13:30.10:0,30,1804	0/0:79,0:79:99:0,181,9144	0/0:19,0:19:42.13:0,42,1798	0/0:20,0:20:48.16:0,48,2725	0/0:37,0:37:81.17:0,81,4266	0/0:21,0:21:56.93:0,57,2671	0/0:30,0:30:81.27:0,81,3985	0/0:15,0:13:33.11:0,33,1574	0/0:9,0:9:24.08:0,24,1288
chr10	40663992	.	CCACA	C	9988.71	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=15.781;DP=687;FS=1.028;HRun=0;HaplotypeScore=118.9775;InbreedingCoeff=0.9961;MQ=86.47;MQ0=1;MQRankSum=-4.760;QD=39.95;ReadPosRankSum=3.598;VQSLOD=5.3533;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,33:34:63.20:1154,63,0	1/1:0,6:6:15.05:280,15,0	0/0:24,0:24:63.21:0,63,1627	0/0:29,0:29:77.75:0,78,1913	1/1:3,19:22:42.14:756,42,0	0/0:30,0:29:81.28:0,81,2149	0/0:29,0:29:81.23:0,81,1983	0/0:25,0:24:66.23:0,66,1728	0/0:26,0:26:78.25:0,78,2014	1/1:5,34:38:96.30:1682,96,0	1/1:0,15:14:18.06:335,18,0	0/0:23,0:23:66.21:0,66,1690	0/0:30,0:30:78.22:0,78,1953	0/0:32,0:32:87.23:0,87,2228	1/1:2,43:45:99:1937,105,0	1/1:0,20:20:48.16:877,48,0	1/1:1,16:17:30.10:560,30,0	1/1:1,10:11:24.08:448,24,0	0/0:18,0:18:54.19:0,54,1433	0/0:28,0:28:69.22:0,69,1774	0/0:33,0:33:90.31:0,90,2380	1/1:1,17:18:45.15:840,45,0	0/0:22,0:22:51.17:0,51,1307	0/0:22,0:22:66.23:0,66,1749	1/1:1,22:23:60.21:1119,60,0	0/0:32,0:32:93.32:0,93,2473	0/0:24,0:24:69.22:0,69,1780	0/0:10,0:10:30.08:0,30,732
chr10	40664100	.	GTA	G	17594.21	PASS	AB=0.797;AC=52;AF=0.929;AN=56;BaseQRankSum=1.307;DP=710;FS=9.639;HRun=0;HaplotypeScore=194.2596;InbreedingCoeff=0.5185;MQ=53.56;MQ0=5;MQRankSum=-0.187;QD=25.65;ReadPosRankSum=5.181;VQSLOD=5.0114;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,11:22:36.09:431,36,0	1/1:6,6:12:27.05:296,27,0	0/0:24,0:11:28.57:0,29,359	0/1:30,0:11:8.70:9,0,312	1/1:6,27:34:69.03:801,69,0	1/1:7,18:25:48.02:486,48,0	1/1:6,12:18:24.04:247,24,0	1/1:0,33:32:93.21:1221,93,0	1/1:4,19:23:54.11:563,54,0	1/1:12,20:31:84.13:948,84,0	1/1:6,16:22:30.08:397,30,0	1/1:1,21:22:45.15:681,45,0	0/1:7,15:22:1.92:276,0,2	1/1:13,15:28:3.78:312,4,0	1/1:14,27:41:87.21:995,87,0	1/1:6,21:27:63.18:749,63,0	1/1:10,8:18:27.06:302,27,0	1/1:6,10:16:47.94:509,48,0	1/1:4,13:17:23.81:465,24,0	1/1:1,26:27:57.19:861,57,0	1/1:2,36:38:75.71:1263,76,0	1/1:8,14:22:39.07:422,39,0	1/1:0,27:27:59.95:912,60,0	1/1:4,17:21:24.54:489,25,0	1/1:10,21:31:75.19:886,75,0	1/1:0,32:32:96.17:1278,96,0	1/1:0,35:35:90.31:1365,90,0	1/1:1,10:11:30.05:431,30,0
chr10	40664104	.	G	GTA	1699.97	PASS	AB=0.885;AC=16;AF=0.286;AN=56;BaseQRankSum=-9.238;DP=716;FS=3.022;HRun=0;HaplotypeScore=250.8520;InbreedingCoeff=-0.3960;MQ=52.98;MQ0=5;MQRankSum=0.196;QD=4.10;ReadPosRankSum=-8.024;VQSLOD=0.5215;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:17,6:23:39.60:217,0,40	0/1:9,2:11:33.74:34,0,78	0/0:26,0:11:22.79:0,23,291	0/0:30,0:10:10.42:0,10,275	0/1:29,3:33:55.19:55,0,113	0/1:19,3:23:40.02:40,0,56	0/1:16,5:21:27.38:138,0,27	0/1:34,0:32:99:112,0,199	0/1:23,0:23:64.62:172,0,65	0/1:28,4:31:99:301,0,127	0/1:22,0:22:86.51:87,0,115	0/0:21,0:21:39.99:0,40,178	0/0:22,0:22:51.35:0,51,479	0/0:23,0:23:47.80:0,48,426	0/1:33,8:41:99:104,0,157	0/1:25,4:29:99:166,0,136	0/1:11,7:19:55:91,0,55	0/1:16,3:19:90.31:185,0,90	0/0:17,0:17:25.73:0,26,234	0/0:28,0:28:30.41:0,30,239	0/0:37,0:37:80.21:0,80,379	0/1:20,3:23:20.98:21,0,129	0/0:28,0:28:53.74:0,54,258	0/0:22,0:22:39.16:0,39,210	0/1:26,5:31:99:131,0,140	0/1:31,0:31:6.25:6,0,243	0/0:34,0:34:85.91:0,86,414	0/0:11,0:11:27.87:0,28,136
chr10	40664106	.	GTA	G	7433.83	PASS	AB=0.844;AC=33;AF=0.589;AN=56;BaseQRankSum=-5.616;DP=712;FS=1.155;HRun=0;HaplotypeScore=230.2356;InbreedingCoeff=0.6220;MQ=53.50;MQ0=6;MQRankSum=-5.010;QD=15.88;ReadPosRankSum=0.816;VQSLOD=4.4337;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,9:21:35.97:375,36,0	1/1:5,6:11:27.04:275,27,0	0/0:29,0:11:22.46:0,22,316	0/0:33,0:11:22.37:0,22,359	1/1:5,27:32:63.02:693,63,0	1/1:5,2:22:42.98:242,43,0	1/1:9,2:21:29.18:198,29,0	0/1:34,0:32:42.98:43,0,69	1/1:5,4:24:52.19:315,52,0	1/1:15,18:32:68.24:847,68,0	1/1:5,16:21:24.78:319,25,0	0/0:21,0:21:16.17:0,16,63	0/1:9,0:24:10.01:269,0,10	0/1:8,0:23:15.71:244,0,16	1/1:13,26:39:84.17:892,84,0	1/1:10,19:29:62.16:685,62,0	1/1:11,7:18:30.03:303,30,0	1/1:8,10:18:50.32:496,50,0	0/0:17,0:17:19.23:0,19,182	0/0:29,0:29:19.23:0,19,128	0/0:37,0:37:41.20:0,41,143	1/1:8,14:22:39.05:392,39,0	0/0:28,0:28:9.53:0,10,61	0/0:22,0:22:8.08:0,8,112	1/1:10,20:30:72.16:794,72,0	0/0:28,0:28:5.82:0,6,75	0/1:35,0:35:44.97:45,0,63	0/1:11,0:11:5.30:8,0,5
chr10	40664286	.	G	GAGAGAGAGAGAA	9014.76	PASS	AB=1.000;AC=43;AF=0.768;AN=56;BaseQRankSum=0.803;DP=649;FS=9.090;HRun=0;HaplotypeScore=207.4336;InbreedingCoeff=0.7293;MQ=52.56;MQ0=24;MQRankSum=-1.188;QD=19.81;ReadPosRankSum=-0.272;VQSLOD=3.0562;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:22:6.59:242,7,0	1/1:7,0:5:11.98:136,12,0	0/0:51,0:22:30.54:0,31,236	0/0:69,0:15:8:0,8,149	1/1:25,0:22:13.48:364,13,0	0/0:26,0:26:2.80:0,3,188	0/0:13,0:12:8.94:0,9,70	1/1:34,0:34:70.96:1233,71,0	0/0:20,0:19:14.25:0,14,115	1/1:30,0:29:64.40:765,64,0	1/1:25,0:24:20.87:172,21,0	1/1:14,0:14:3.01:121,3,0	0/0:14,0:14:20.60:0,21,133	0/1:20,0:20:60.87:128,0,61	1/1:22,0:20:40.32:451,40,0	1/1:19,0:16:29.34:369,29,0	1/1:11,0:10:20.98:300,21,0	1/1:16,0:14:7.01:274,7,0	1/1:13,0:12:15.49:170,15,0	1/1:29,0:26:16.54:412,17,0	1/1:18,0:18:20.26:167,20,0	1/1:16,0:14:28.88:243,29,0	1/1:23,0:22:39.87:420,40,0	1/1:5,7:12:6.02:192,6,0	1/1:23,0:23:30.91:363,31,0	1/1:34,0:33:88.87:1362,89,0	1/1:31,0:30:75.35:963,75,0	1/1:8,0:6:11.06:168,11,0
chr10	40664288	.	G	GAGAGAGAGAA	7863.98	PASS	AB=1.000;AC=41;AF=0.732;AN=56;BaseQRankSum=0.412;DP=649;FS=12.585;HRun=0;HaplotypeScore=192.2108;InbreedingCoeff=0.5713;MQ=52.56;MQ0=24;MQRankSum=-2.115;QD=17.32;ReadPosRankSum=3.067;VQSLOD=3.0303;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:23:8.14:237,0,8	1/1:7,0:5:11.98:132,12,0	0/0:51,0:21:31.45:0,31,238	0/0:71,0:16:9.94:0,10,156	1/1:24,0:21:14.23:328,14,0	0/0:26,0:26:1.24:0,1,187	0/0:13,0:12:8.94:0,9,70	1/1:34,0:34:60.63:1119,61,0	0/0:19,0:18:16.20:0,16,141	1/1:31,0:30:31.32:673,31,0	0/1:25,0:23:22.19:144,0,22	1/1:2,11:14:3.01:154,3,0	0/0:15,0:15:23.59:0,24,155	0/1:21,0:21:60.87:102,0,61	1/1:21,0:19:40.68:384,41,0	1/1:18,0:15:29.56:330,30,0	1/1:11,0:10:20.98:281,21,0	1/1:16,0:14:6.99:247,7,0	1/1:13,0:12:5.81:158,6,0	1/1:29,0:26:16.91:386,17,0	1/1:18,0:18:20.22:168,20,0	1/1:16,0:14:28.88:224,29,0	1/1:23,0:22:18.90:277,19,0	1/1:9,2:11:6.02:258,6,0	1/1:22,0:22:9.02:291,9,0	1/1:35,0:34:39.82:1005,40,0	1/1:31,0:30:54.15:816,54,0	1/1:9,0:7:9.15:153,9,0
chr10	40664593	.	GT	G	2896.20	PASS	AB=0.975;AC=32;AF=0.571;AN=56;BaseQRankSum=11.078;DP=537;FS=3.699;HRun=12;HaplotypeScore=77.8497;InbreedingCoeff=0.7391;MQ=67.89;MQ0=2;MQRankSum=1.065;QD=8.80;ReadPosRankSum=2.554;VQSLOD=3.0882;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,1:31:43.71:141,44,0	1/1:0,7:5:11.95:93,12,0	0/1:16,0:10:12.93:13,0,34	0/0:16,0:10:13.16:0,13,74	1/1:3,1:24:29.80:94,30,0	1/1:3,21:24:32.31:434,32,0	1/1:5,15:20:20.08:260,20,0	0/0:33,0:33:72.59:0,73,843	1/1:3,13:16:32.87:255,33,0	1/1:2,23:26:70.71:528,71,0	1/1:3,19:23:42.80:377,43,0	0/0:23,0:23:57.78:0,58,275	0/0:15,0:17:38.90:0,39,371	0/0:17,1:18:23.40:0,23,398	1/1:0,0:9:14.26:41,14,0	1/1:1,0:13:20.37:59,20,0	1/1:3,0:27:40.73:118,41,0	1/1:1,15:16:38.85:301,39,0	0/0:16,0:16:29.90:0,30,288	0/0:23,1:25:29.90:0,30,501	0/1:5,0:5:9.99:10,0,79	1/1:2,0:18:25.43:77,25,0	0/0:20,0:19:39.76:0,40,198	0/1:9,0:9:4.61:5,0,45	1/1:1,16:17:38.85:301,39,0	0/1:23,3:27:6.71:7,0,457	0/0:22,0:23:68.88:0,69,664	0/0:17,0:17:51.10:0,51,518
chr10	40666162	.	T	TA	4821.40	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-9.144;DP=541;FS=2.764;HRun=4;HaplotypeScore=61.8970;InbreedingCoeff=0.9990;MQ=81.38;MQ0=0;MQRankSum=-0.214;QD=38.27;ReadPosRankSum=2.156;VQSLOD=4.7240;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,26:27:69.19:923,69,0	0/0:14,0:14:39.11:0,39,442	0/0:19,0:19:38.51:0,39,365	0/0:11,0:11:21.05:0,21,238	1/1:0,30:30:87.29:1190,87,0	0/0:12,0:12:33.09:0,33,374	0/0:21,0:21:60.15:0,60,669	0/0:17,0:17:45.12:0,45,503	0/0:20,0:20:57.16:0,57,647	0/0:29,0:29:84.24:0,84,953	0/0:17,0:17:51.14:0,51,577	0/0:17,0:17:51.15:0,51,578	0/0:20,0:20:60.17:0,60,681	0/0:15,0:15:45.13:0,45,511	1/1:0,20:20:57.19:780,57,0	1/1:0,12:12:33.11:451,33,0	1/1:0,18:18:54.18:738,54,0	0/0:20,0:19:54.15:0,54,612	0/0:24,0:24:69.20:0,69,783	0/0:17,0:17:48.14:0,48,544	0/0:23,0:23:63.18:0,63,715	1/1:1,18:19:54.18:739,54,0	0/0:19,0:19:54.15:0,54,613	0/0:20,0:20:54.13:0,54,602	0/0:24,0:24:63.15:0,63,694	0/0:18,0:18:54.15:0,54,612	0/0:19,0:19:57.16:0,57,646	0/0:19,0:19:57.16:0,57,646
chr10	40671468	.	CAT	C	250.14	PASS	AC=10;AF=0.263;AN=38;BaseQRankSum=3.745;DP=113;FS=5.653;HRun=0;HaplotypeScore=27.9576;InbreedingCoeff=0.5377;MQ=84.72;MQ0=1;MQRankSum=-1.586;QD=11.91;ReadPosRankSum=0.302;VQSLOD=2.2836;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:7:14.98:0,15,248	./.	0/0:9,0:5:3.01:0,3,51	0/0:21,0:11:1.30:0,1,27	0/0:2,0:2:6.02:0,6,98	1/1:1,2:3:6.02:78,6,0	./.	0/0:15,0:15:42.14:0,42,714	1/1:1,1:2:2.95:39,3,0	1/1:0,3:3:9:99,9,0	./.	./.	0/0:2,0:2:3.01:0,3,51	0/0:1,0:1:3.01:0,3,51	0/0:2,0:2:6.02:0,6,102	0/0:2,0:2:6.02:0,6,102	0/0:16,0:16:39.99:0,40,749	1/1:1,9:10:5.75:51,6,0	0/0:2,0:2:3.01:0,3,51	./.	./.	./.	./.	./.	1/1:0,3:3:9.03:109,9,0	0/0:1,0:1:3.01:0,3,51	0/0:4,0:4:12.04:0,12,196	0/0:6,0:6:18.06:0,18,306
chr10	40671671	.	TTTTGTTTG	T	3869.12	PASS	AB=0.975;AC=22;AF=0.407;AN=54;BaseQRankSum=10.695;DP=435;FS=26.492;HRun=0;HaplotypeScore=107.8954;InbreedingCoeff=0.7169;MQ=57.41;MQ0=2;MQRankSum=-9.475;QD=22.89;ReadPosRankSum=1.724;VQSLOD=1.2534;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:39.13:0,39,1612	./.	0/0:22,0:14:11.98:0,12,218	0/1:17,0:14:36.18:36,0,239	0/0:4,0:4:9.03:0,9,292	1/1:9,12:21:24.08:609,24,0	1/1:11,7:18:6.02:152,6,0	0/0:37,0:37:60.20:0,60,2147	1/1:6,12:18:30.10:754,30,0	1/1:2,6:7:15.05:380,15,0	1/1:5,10:15:32.98:649,33,0	1/1:2,0:9:15.05:279,15,0	0/0:19,0:19:48.16:0,48,1978	0/0:10,0:10:27.09:0,27,1057	0/0:17,0:17:36.12:0,36,1478	0/0:18,0:18:39.12:0,39,1497	0/0:35,0:35:78.27:0,78,2986	1/1:3,10:13:22.37:601,22,0	0/0:26,0:26:27.09:0,27,986	0/0:5,0:5:12.01:0,12,393	0/0:26,0:26:45.15:0,45,1778	0/0:4,0:4:12.04:0,12,417	1/1:3,0:7:3.48:57,3,0	1/1:5,0:14:1.69:18,2,0	1/1:4,6:10:12.04:294,12,0	0/1:18,1:19:39.95:40,0,1248	0/0:23,0:22:39.11:0,39,1501	0/0:2,0:2:3.01:0,3,124
chr10	40674068	.	CGGG	C	6439.47	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=5.530;DP=537;FS=3.432;HRun=10;HaplotypeScore=85.9047;InbreedingCoeff=0.9533;MQ=78.14;MQ0=0;MQRankSum=-5.016;QD=27.52;ReadPosRankSum=10.261;VQSLOD=2.3078;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:31:60.15:0,60,1035	1/1:1,0:1:3.01:41,3,0	0/0:20,0:19:45.92:0,46,632	0/0:18,0:19:27.40:0,27,578	0/0:12,0:13:20.55:0,21,336	1/1:3,19:22:57.17:777,57,0	1/1:1,26:27:63.20:859,63,0	0/0:19,0:19:19.61:0,20,276	1/1:4,14:18:39.11:531,39,0	1/1:7,18:25:54.14:721,54,0	1/1:6,14:20:18.02:319,18,0	1/1:3,29:32:81.26:1099,81,0	0/0:8,0:8:18.06:0,18,338	0/0:18,0:19:45.02:0,45,783	0/0:17,0:17:38.48:0,38,655	0/0:21,0:21:39.12:0,39,721	0/0:37,0:38:93.26:0,93,1574	1/1:5,16:21:30.08:409,30,0	0/0:18,0:17:30.07:0,30,453	0/0:11,0:12:9.50:0,10,152	0/0:20,0:20:11.59:0,12,762	0/0:12,0:13:24.03:0,24,388	1/1:3,12:15:32.88:448,33,0	1/1:4,29:33:60.05:790,60,0	1/1:7,13:20:33.09:445,33,0	0/0:16,0:17:27:0,27,431	0/0:11,0:11:24.06:0,24,437	0/0:6,0:6:12.04:0,12,238
chr10	40674904	.	A	ACT	558.45	PASS	AB=0.784;AC=6;AF=0.111;AN=54;BaseQRankSum=1.863;DP=545;FS=4.810;HRun=0;HaplotypeScore=73.5226;InbreedingCoeff=0.2410;MQ=48.16;MQ0=35;MQRankSum=1.068;QD=5.94;ReadPosRankSum=6.774;VQSLOD=2.0610;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:32:46.82:0,47,489	0/0:9,0:9:7.44:0,7,42	./.	0/0:23,0:3:9.01:0,9,93	0/0:18,0:18:35.95:0,36,362	1/1:21,1:16:18.74:369,19,0	0/1:8,25:32:64.48:146,0,64	0/0:23,0:21:54.52:0,55,397	0/1:5,16:20:35.52:153,0,36	0/0:20,0:20:27.17:0,27,287	0/0:11,0:11:7.84:0,8,71	0/0:19,0:18:22.16:0,22,314	0/0:17,0:13:26.94:0,27,219	0/0:16,0:15:23.78:0,24,190	0/0:12,0:12:24.45:0,24,219	0/1:9,0:9:3.05:3,0,142	0/0:31,0:31:74.58:0,75,677	0/0:28,0:26:30.33:0,30,388	0/0:11,0:11:22.35:0,22,159	0/0:12,0:11:23.94:0,24,198	0/0:41,0:38:28.17:0,28,384	0/0:20,0:17:8.04:0,8,167	0/0:10,0:9:14.93:0,15,139	0/0:34,0:33:77.97:0,78,812	0/0:22,0:20:10.62:0,11,116	0/0:22,0:21:32.70:0,33,376	0/1:9,0:8:2.80:3,0,58	0/0:4,0:4:11.97:0,12,96
chr10	40675621	.	AC	A	3753.10	PASS	AB=1.000;AC=44;AF=0.786;AN=56;BaseQRankSum=4.205;DP=545;FS=3.883;HRun=10;HaplotypeScore=100.2198;InbreedingCoeff=0.6010;MQ=78.70;MQ0=3;MQRankSum=-2.581;QD=8.21;ReadPosRankSum=5.162;VQSLOD=2.1763;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:23:3.89:4,0,43	1/1:7,0:7:8.15:24,8,0	0/0:36,0:26:18.18:0,18,286	0/0:21,0:13:14.14:0,14,153	1/1:18,0:17:45.53:227,46,0	0/1:16,0:16:11.56:12,0,23	1/1:20,0:20:14.42:36,14,0	1/1:5,10:15:26.66:222,27,0	0/1:23,0:23:32.14:32,0,41	1/1:19,0:19:41.50:163,42,0	1/1:24,0:24:42.30:136,42,0	1/1:23,0:23:34.62:103,35,0	0/0:16,0:16:47.84:0,48,494	0/0:15,0:15:36.07:0,36,381	1/1:17,0:17:42.61:204,43,0	1/1:20,0:19:34.09:164,34,0	1/1:21,1:22:42.61:205,43,0	1/1:16,0:16:23.17:73,23,0	1/1:5,17:23:55.81:447,56,0	1/1:5,11:16:26.89:225,27,0	1/1:7,12:19:23.87:233,24,0	0/1:22,0:22:16.01:16,0,57	1/1:20,0:20:30.55:92,31,0	1/1:19,0:19:26.47:78,26,0	1/1:19,0:19:33.35:103,33,0	1/1:3,13:16:46.99:386,47,0	1/1:8,18:26:50.95:436,51,0	1/1:4,10:14:14.98:130,15,0
chr10	40675629	.	CCCAA	C	6379.23	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-7.679;DP=543;FS=0.390;HRun=0;HaplotypeScore=118.5759;InbreedingCoeff=0.9782;MQ=79.82;MQ0=3;MQRankSum=-3.939;QD=43.69;ReadPosRankSum=3.963;VQSLOD=5.3689;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:36.12:0,36,508	1/1:0,7:7:12.04:226,12,0	0/0:40,0:28:61.64:0,62,961	0/0:23,0:14:38.90:0,39,523	0/0:23,0:22:46.43:0,46,226	0/0:18,0:18:45.14:0,45,611	0/0:18,0:18:33.11:0,33,448	0/0:18,0:18:48.01:0,48,608	0/0:22,0:22:49.78:0,50,651	1/1:1,22:23:69.22:1069,69,0	1/1:1,22:23:60.19:1083,60,0	1/1:2,19:21:51.17:962,51,0	0/0:17,0:17:51.17:0,51,1269	0/0:16,0:16:48.16:0,48,1155	0/0:17,0:17:42.61:0,43,213	0/0:18,0:17:34.09:0,34,170	0/0:21,0:21:42.61:0,43,213	1/1:0,15:15:33.11:599,33,0	0/0:19,0:19:51.56:0,52,722	0/0:16,0:16:39.93:0,40,536	0/0:15,0:15:34.50:0,34,475	0/0:21,0:21:61.06:0,61,785	1/1:0,20:20:44.99:848,45,0	1/1:1,18:19:15.77:710,16,0	1/1:0,18:18:48.16:882,48,0	0/0:22,1:23:7.65:0,8,811	0/0:23,0:23:60.20:0,60,893	0/0:11,0:11:18.04:0,18,241
chr10	40675630	.	CCA	C	4132.47	PASS	AB=0.984;AC=28;AF=0.500;AN=56;BaseQRankSum=5.537;DP=557;FS=2.504;HRun=0;HaplotypeScore=108.1759;InbreedingCoeff=0.6736;MQ=79.48;MQ0=3;MQRankSum=-3.565;QD=13.64;ReadPosRankSum=3.339;VQSLOD=3.7911;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:22.69:0,23,98	1/1:7,0:7:11.19:53,11,0	0/0:40,0:28:46.31:0,46,486	0/0:23,0:14:21.32:0,21,245	1/1:4,19:22:59.71:675,60,0	0/0:22,0:22:19.80:0,20,82	0/0:20,0:20:17.10:0,17,47	0/1:18,0:19:26.36:26,0,152	0/0:24,0:24:10.71:0,11,109	1/1:22,0:23:64.24:307,64,0	1/1:22,0:23:56.04:264,56,0	1/1:19,0:21:47.65:225,48,0	0/0:20,0:20:59.84:0,60,885	0/0:16,0:16:48.11:0,48,723	1/1:1,16:17:45.15:638,45,0	1/1:0,18:17:36.12:511,36,0	1/1:3,18:21:45.15:638,45,0	1/1:15,0:15:30.78:144,31,0	0/0:19,0:19:2.79:0,3,110	0/0:18,0:18:21.32:0,21,189	0/1:14,1:15:29.67:30,0,93	0/1:21,0:21:28.14:28,0,106	1/1:20,0:20:41.72:198,42,0	1/1:19,0:19:36.40:170,36,0	1/1:18,0:18:44.81:210,45,0	0/1:23,0:23:17.22:17,0,231	0/0:23,0:23:53.23:0,53,243	0/0:11,0:11:12.98:0,13,48
chr10	40675631	.	CA	C	3496.58	PASS	AB=1.000;AC=39;AF=0.696;AN=56;BaseQRankSum=6.761;DP=556;FS=40.421;HRun=8;HaplotypeScore=102.4242;InbreedingCoeff=0.7415;MQ=78.17;MQ0=3;MQRankSum=-3.404;QD=8.76;ReadPosRankSum=6.332;VQSLOD=-0.6914;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,15:18:24.03:231,24,0	1/1:7,0:7:8.88:29,9,0	0/0:37,0:26:17.22:0,17,208	0/0:23,0:14:18.10:0,18,151	1/1:20,3:22:49.58:284,50,0	1/1:3,18:21:33.05:318,33,0	1/1:0,20:20:33.05:318,33,0	0/0:19,0:19:14.62:0,15,133	1/1:4,19:23:36.05:347,36,0	1/1:23,0:23:41.44:147,41,0	1/1:23,0:23:40.10:128,40,0	1/1:21,0:21:38.05:122,38,0	0/0:20,0:20:51.06:0,51,544	0/0:16,0:16:42.08:0,42,455	1/1:16,1:17:43.80:248,44,0	1/1:18,0:17:35.05:198,35,0	1/1:19,2:21:43.74:247,44,0	1/1:15,0:15:22.20:71,22,0	0/1:19,0:19:7.33:7,0,32	0/0:18,0:18:3.83:0,4,117	0/1:16,0:16:9.93:10,0,51	1/1:14,10:24:51.02:475,51,0	1/1:20,0:20:32.97:107,33,0	1/1:18,0:18:28.86:92,29,0	1/1:18,0:18:33.45:106,33,0	0/0:23,0:23:25.26:0,25,192	0/1:24,0:24:2.07:2,0,83	1/1:10,0:10:3.58:9,4,0
chr10	40677256	.	GTT	G	1856.12	PASS	AB=0.920;AC=17;AF=0.304;AN=56;BaseQRankSum=-3.350;DP=561;FS=7.980;HRun=15;HaplotypeScore=79.8656;InbreedingCoeff=0.8691;MQ=69.69;MQ0=2;MQRankSum=4.472;QD=11.11;ReadPosRankSum=8.629;VQSLOD=1.8400;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:23:25.20:0,25,241	1/1:2,7:10:26.43:208,26,0	0/0:25,0:21:17.51:0,18,154	0/0:20,0:17:14.94:0,15,175	0/0:9,0:24:28.79:0,29,190	0/0:5,0:19:8.98:0,9,77	0/0:2,0:16:11.51:0,12,105	0/0:16,0:29:54.69:0,55,351	0/0:8,0:19:20.74:0,21,155	1/1:10,14:24:38.37:327,38,0	1/1:5,12:17:29.78:251,30,0	1/1:12,10:22:24.35:197,24,0	0/0:23,0:25:68.11:0,68,769	0/0:18,0:22:45.05:0,45,533	0/0:15,0:15:20.80:0,21,181	0/0:12,0:20:17.78:0,18,135	0/0:23,0:23:37.13:0,37,349	1/1:8,11:19:29.70:251,30,0	0/0:13,0:29:53.64:0,54,444	0/0:24,0:24:52.29:0,52,457	0/0:6,0:6:8.96:0,9,80	0/0:14,0:14:32.84:0,33,297	1/1:4,18:23:53.69:460,54,0	1/1:3,7:10:20.54:185,21,0	1/1:5,12:19:7.27:173,7,0	0/1:4,2:23:6.48:6,0,372	0/0:5,0:25:17.95:0,18,152	0/0:1,0:12:6.72:0,7,39
chr10	40684143	.	C	CT	2915.27	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=-12.054;DP=503;FS=10.676;HRun=9;HaplotypeScore=61.7757;InbreedingCoeff=0.9232;MQ=61.25;MQ0=0;MQRankSum=-2.232;QD=21.92;ReadPosRankSum=-3.561;VQSLOD=2.4621;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:65.96:0,66,568	0/0:14,0:14:35.99:0,36,312	0/1:6,0:5:0.80:1,0,20	0/0:4,0:4:8.99:0,9,77	0/0:30,0:31:83.01:0,83,707	0/0:22,0:23:55.99:0,56,472	0/0:13,0:13:29.99:0,30,260	1/1:2,23:26:47.89:703,48,0	0/0:12,0:12:35.99:0,36,312	0/0:20,0:20:49.35:0,49,419	0/0:28,0:28:67.98:0,68,562	0/0:19,0:19:47.95:0,48,408	0/0:7,0:7:14.98:0,15,127	0/0:14,0:14:35.99:0,36,312	0/0:21,0:21:53.97:0,54,469	0/0:17,0:17:44.96:0,45,383	0/0:29,0:29:74.97:0,75,651	0/0:35,0:34:94.92:0,95,786	1/1:7,12:19:42.11:465,42,0	1/1:4,18:22:48.08:517,48,0	1/1:2,8:10:27.07:296,27,0	0/0:7,0:7:20.99:0,21,179	0/0:14,0:14:38.98:0,39,334	0/0:7,0:6:14.99:0,15,127	0/0:29,0:30:61.76:0,62,592	1/1:1,13:15:19.07:425,19,0	1/1:1,15:16:33.09:364,33,0	1/1:4,15:19:10.05:339,10,0
chr10	40684368	.	A	AAAGG	6309.68	PASS	AB=0.750;AC=23;AF=0.411;AN=56;BaseQRankSum=-3.252;DP=484;FS=41.039;HRun=0;HaplotypeScore=84.1553;InbreedingCoeff=0.9122;MQ=65.39;MQ0=4;MQRankSum=-4.735;QD=33.74;ReadPosRankSum=-0.997;VQSLOD=2.3040;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:93.28:0,93,1458	0/0:8,0:8:21.06:0,21,325	0/0:17,0:13:15.04:0,15,226	0/0:16,0:12:21.52:0,22,268	0/0:18,0:18:48.13:0,48,719	1/1:9,2:11:21.03:345,21,0	1/1:13,6:19:18.87:648,19,0	1/1:22,3:24:42.06:529,42,0	1/1:9,4:12:24.04:407,24,0	0/0:19,0:19:41.86:0,42,596	0/0:26,0:26:69.19:0,69,1025	0/0:18,0:18:45.11:0,45,649	1/1:4,7:10:24.07:508,24,0	1/1:3,7:9:21.06:468,21,0	0/0:18,0:18:48.07:0,48,715	0/0:15,0:15:39.12:0,39,626	0/0:40,0:40:72.60:0,73,1000	0/0:23,0:22:28.90:0,29,695	1/1:16,6:19:27.05:520,27,0	1/1:7,7:14:30.06:627,30,0	1/1:8,2:9:20.98:313,21,0	0/0:4,0:4:12.03:0,12,175	0/0:8,0:8:18.04:0,18,252	0/0:11,0:11:18.05:0,18,275	0/0:17,0:17:42.13:0,42,652	0/1:14,7:20:29.78:689,0,30	1/1:12,12:19:51.09:945,51,0	1/1:4,3:7:20.95:310,21,0
chr10	40684408	.	CT	C	6821.32	PASS	AB=0.611;AC=35;AF=0.625;AN=56;BaseQRankSum=10.194;DP=448;FS=13.354;HRun=7;HaplotypeScore=55.9201;InbreedingCoeff=0.8953;MQ=70.12;MQ0=2;MQRankSum=-3.996;QD=23.20;ReadPosRankSum=-1.090;VQSLOD=3.3864;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,27:33:75.17:765,75,0	0/0:7,0:7:18.06:0,18,226	0/0:18,0:11:18.05:0,18,205	0/0:17,0:14:25.30:0,25,228	1/1:1,23:24:60.07:598,60,0	1/1:1,8:9:21.05:214,21,0	1/1:3,12:15:36.08:367,36,0	1/1:4,22:26:66.13:667,66,0	1/1:0,12:11:27.06:275,27,0	0/0:23,0:23:66.21:0,66,831	0/0:24,0:24:69.22:0,69,868	0/0:13,0:13:39.12:0,39,491	1/1:2,8:9:21.05:214,21,0	1/1:2,5:6:9.01:92,9,0	1/1:5,16:21:45.10:459,45,0	1/1:0,17:17:48.11:489,48,0	1/1:0,26:26:66.15:673,66,0	0/0:20,0:20:54.17:0,54,679	1/1:5,15:19:39.07:398,39,0	1/1:0,12:12:36.08:367,36,0	1/1:1,3:4:6.01:61,6,0	1/1:0,10:10:27.06:275,27,0	0/0:7,0:7:21.07:0,21,264	0/0:9,0:9:21.07:0,21,264	0/0:16,0:16:48.15:0,48,603	0/1:4,7:10:51.45:152,0,51	1/1:3,19:18:39.09:398,39,0	1/1:1,14:15:36.04:357,36,0
chr10	40684540	.	C	CTTTCTT	1675.33	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=4.234;DP=519;FS=2.924;HRun=0;HaplotypeScore=135.9898;InbreedingCoeff=0.8461;MQ=62.76;MQ0=11;MQRankSum=-6.472;QD=19.26;ReadPosRankSum=-4.336;VQSLOD=2.4208;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:49.93:0,50,1049	0/0:10,0:10:24.05:0,24,453	0/0:50,0:9:16.91:0,17,206	0/1:44,0:17:1.93:2,0,94	0/0:27,0:26:46.40:0,46,864	1/1:15,0:15:35.84:811,36,0	1/1:14,0:16:35.90:535,36,0	0/0:34,0:34:46.24:0,46,1105	1/1:5,5:12:21.07:470,21,0	0/0:16,0:16:44.63:0,45,898	0/0:21,0:22:63.07:0,63,1105	0/0:8,0:8:20.98:0,21,412	0/0:13,0:13:31.38:0,31,485	0/0:12,0:12:27.05:0,27,455	0/0:11,0:11:12.54:0,13,220	0/0:13,0:13:34.90:0,35,511	0/0:18,0:18:38.68:0,39,539	0/0:30,0:32:93.24:0,93,1820	0/0:16,0:15:37.35:0,37,382	0/0:21,0:20:27.57:0,28,587	0/0:4,0:4:9.02:0,9,135	0/0:13,0:13:30.25:0,30,467	0/0:22,0:23:60.04:0,60,1056	0/0:4,0:4:9.02:0,9,154	0/0:11,0:12:33.01:0,33,639	0/0:14,0:14:35.12:0,35,513	0/0:16,0:16:32.36:0,32,482	0/0:12,0:12:33.45:0,33,519
chr10	40684543	.	T	TC	223.75	PASS	AB=0.938;AC=5;AF=0.089;AN=56;BaseQRankSum=4.816;DP=515;FS=3.823;HRun=0;HaplotypeScore=94.1738;InbreedingCoeff=0.7432;MQ=64.41;MQ0=11;MQRankSum=-4.048;QD=5.20;ReadPosRankSum=0.972;VQSLOD=3.1569;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:79.09:0,79,807	0/0:9,0:9:24.04:0,24,283	0/0:53,0:11:18.30:0,18,204	0/0:44,0:16:15.69:0,16,132	0/0:23,0:22:61.18:0,61,598	1/1:11,5:16:29.26:177,29,0	0/1:14,1:15:7.90:94,0,8	0/0:34,0:34:99:0,102,1034	1/1:10,2:12:10.23:77,10,0	0/0:15,0:15:43.94:0,44,555	0/0:24,0:23:69.08:0,69,791	0/0:8,0:8:22.87:0,23,266	0/0:12,0:12:31.10:0,31,254	0/0:12,0:12:24.72:0,25,183	0/0:10,0:10:17.99:0,18,212	0/0:13,0:13:36.07:0,36,410	0/0:19,0:19:37.71:0,38,380	0/0:33,0:33:93.71:0,94,1201	0/0:17,0:16:45.77:0,46,395	0/0:21,0:20:48.22:0,48,470	0/0:4,0:4:9.02:0,9,102	0/0:13,0:13:38.88:0,39,359	0/0:20,0:20:58.25:0,58,666	0/0:3,0:3:9.02:0,9,112	0/0:13,0:13:36.95:0,37,446	0/0:14,0:14:40.28:0,40,419	0/0:16,0:16:42.02:0,42,429	0/0:13,0:13:36.05:0,36,419
chr10	40684553	.	T	TA	501.89	PASS	AB=0.976;AC=12;AF=0.214;AN=56;BaseQRankSum=3.644;DP=492;FS=9.502;HRun=0;HaplotypeScore=94.4218;InbreedingCoeff=0.1081;MQ=67.13;MQ0=8;MQRankSum=-0.023;QD=2.95;ReadPosRankSum=0.267;VQSLOD=2.3435;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:26,2:28:67.60:68,0,114	0/0:8,0:8:23.89:0,24,270	0/0:48,0:13:8.87:0,9,174	0/0:37,0:12:6.38:0,6,47	0/1:22,0:21:23.38:23,0,178	0/0:15,0:15:22.17:0,22,93	0/0:14,0:14:19.28:0,19,82	0/1:25,0:25:32.07:32,0,209	0/0:12,0:12:22.01:0,22,89	0/0:17,0:17:46.89:0,47,562	0/0:21,0:20:56.97:0,57,649	0/0:8,0:8:19.60:0,20,227	1/1:2,8:10:14.22:172,14,0	1/1:2,10:12:13.82:182,14,0	0/1:13,0:13:0.41:0,0,54	0/1:11,1:12:11.13:11,0,65	0/0:18,0:18:17.73:0,18,79	0/0:37,0:37:99:0,103,1241	0/1:11,0:10:54.88:61,0,55	0/1:19,1:19:37.75:38,0,78	0/0:5,0:5:7.43:0,7,37	0/0:13,0:13:5.50:0,5,129	0/0:20,0:20:55.28:0,55,629	0/0:6,0:6:17.06:0,17,166	0/0:13,0:13:36.96:0,37,446	0/1:17,0:17:67.65:68,0,136	0/0:15,0:15:14.50:0,15,70	0/0:15,0:15:2.49:0,2,136
chr10	40684554	.	T	TAA	7119.25	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=6.342;DP=506;FS=1.475;HRun=6;HaplotypeScore=85.6136;InbreedingCoeff=0.9407;MQ=66.75;MQ0=7;MQRankSum=-2.500;QD=24.38;ReadPosRankSum=1.746;VQSLOD=3.4716;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,22:32:69.19:1017,69,0	0/0:8,0:8:18.04:0,18,216	0/0:45,0:13:12.80:0,13,141	0/0:36,0:12:3.53:0,4,94	1/1:5,15:21:50.91:667,51,0	1/1:1,0:15:29.13:231,29,0	1/1:5,0:14:18.15:138,18,0	1/1:4,22:26:63.20:955,63,0	1/1:8,0:12:19.36:123,19,0	0/0:17,0:17:33.06:0,33,373	0/0:21,0:20:48.03:0,48,538	0/0:8,0:8:12.01:0,12,134	1/1:10,0:10:22.28:227,22,0	1/1:12,0:12:19.75:218,20,0	1/1:2,11:14:15.05:228,15,0	1/1:3,10:13:26.99:398,27,0	1/1:2,14:19:33.11:496,33,0	0/0:38,0:38:93.24:0,93,1103	1/1:3,6:10:24.03:309,24,0	1/1:8,12:19:31.91:449,32,0	1/1:1,4:6:6.02:96,6,0	1/1:4,10:14:23.95:286,24,0	0/0:19,0:19:36.03:0,36,394	0/0:7,0:7:15.03:0,15,180	0/0:13,0:13:30.07:0,30,351	1/1:5,10:15:27.05:383,27,0	1/1:5,15:20:39.06:562,39,0	1/1:5,12:17:21.07:336,21,0
chr10	40685917	.	AGTGTGTGT	A	552.13	PASS	AB=0.798;AC=14;AF=0.280;AN=50;BaseQRankSum=4.140;DP=520;FS=1.068;HRun=0;HaplotypeScore=144.2806;InbreedingCoeff=0.5317;MQ=58.04;MQ0=17;MQRankSum=-2.333;QD=3.52;ReadPosRankSum=0.908;VQSLOD=2.7060;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:20,6:24:0.26:0,0,0	0/0:6,0:8:6.02:0,6,103	./.	./.	1/1:16,8:23:5.12:23,5,0	0/0:14,0:20:0.24:0,0,195	0/0:22,0:23:27:0,27,319	0/0:22,0:22:8.99:0,9,91	0/0:13,0:17:24.05:0,24,376	0/0:12,0:15:15.02:0,15,220	0/0:18,0:20:9.01:0,9,127	0/0:22,0:21:21.06:0,21,432	1/1:13,0:16:3.89:58,4,0	1/1:10,0:15:0.71:52,1,0	1/1:6,3:9:3.63:15,4,0	1/1:11,14:25:14.89:373,15,0	1/1:13,6:20:8.33:169,8,0	0/0:13,0:18:9.92:0,10,194	0/0:12,0:11:6:0,6,61	0/0:9,0:12:2.67:0,3,24	0/0:26,0:27:16.79:0,17,126	./.	0/0:16,0:15:3.01:0,3,38	0/0:25,0:24:29.97:0,30,679	0/0:9,0:12:6.02:0,6,102	0/0:15,0:16:8.99:0,9,86	0/0:17,0:28:10.28:0,10,181	0/1:13,0:18:3.59:4,0,73
chr10	40687894	.	AAG	A	1506.72	PASS	AB=0.985;AC=25;AF=0.446;AN=56;BaseQRankSum=13.235;DP=491;FS=5.517;HRun=0;HaplotypeScore=106.5712;InbreedingCoeff=0.1813;MQ=70.15;MQ0=3;MQRankSum=-1.119;QD=4.83;ReadPosRankSum=7.028;VQSLOD=1.6821;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:19:46.28:174,46,0	0/0:13,0:13:39.08:0,39,525	0/0:34,0:17:12.65:0,13,299	0/0:22,0:15:26.64:0,27,221	0/1:32,0:32:72.27:159,0,72	1/1:10,0:10:4.61:58,5,0	0/1:11,0:11:27.24:27,0,28	0/1:20,0:20:50.78:51,0,71	0/1:20,0:20:54.55:55,0,81	0/0:19,0:19:35.10:0,35,755	0/0:22,0:22:58.39:0,58,762	0/0:13,0:13:39.05:0,39,482	0/1:15,0:14:16.08:89,0,16	1/1:15,0:15:33.95:144,34,0	0/1:20,0:20:7.08:70,0,7	1/1:16,0:16:5.19:59,5,0	0/1:21,0:20:52.06:52,0,114	0/0:16,0:16:45.10:0,45,655	0/1:20,0:20:56.46:79,0,56	0/1:19,2:21:35.86:196,0,36	0/1:6,0:6:9.90:26,0,10	1/1:8,1:9:16.82:81,17,0	0/0:20,0:20:36.13:0,36,639	0/0:5,0:5:15.03:0,15,218	0/0:15,0:15:45.07:0,45,660	0/1:11,1:12:28.83:58,0,29	1/1:34,1:35:38.29:253,38,0	1/1:10,0:10:20.74:68,21,0
chr10	40687896	.	GAA	G	7548.43	PASS	AB=0.581;AC=35;AF=0.625;AN=56;BaseQRankSum=7.429;DP=499;FS=9.047;HRun=11;HaplotypeScore=89.1589;InbreedingCoeff=0.9161;MQ=74.06;MQ0=3;MQRankSum=-0.477;QD=24.59;ReadPosRankSum=3.829;VQSLOD=4.2166;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,20:21:59.36:614,59,0	0/0:13,0:13:30.10:0,30,462	0/0:39,0:19:6.62:0,7,146	0/0:26,0:18:17.31:0,17,177	1/1:6,26:32:43.36:719,43,0	1/1:1,9:10:24.04:255,24,0	1/1:2,9:11:21.05:224,21,0	0/1:5,13:18:5.57:344,0,6	1/1:5,15:20:36.06:383,36,0	0/0:21,0:22:58.87:0,59,775	0/0:22,0:22:60.18:0,60,858	0/0:13,0:13:27.08:0,27,394	1/1:3,12:14:30.54:320,31,0	1/1:1,14:15:42.07:446,42,0	1/1:2,19:21:48.11:511,48,0	1/1:0,12:13:38.84:395,39,0	1/1:7,14:20:36.04:383,36,0	0/0:16,0:16:42.11:0,42,621	1/1:3,17:20:48.02:507,48,0	1/1:5,15:20:45.01:456,45,0	1/1:1,5:6:15.04:160,15,0	1/1:1,8:9:23.98:240,24,0	0/0:17,0:19:49.74:0,50,673	0/0:5,0:5:12.04:0,12,185	0/0:16,0:16:41.85:0,42,606	1/1:2,10:12:30.06:318,30,0	1/1:2,31:33:93.21:987,93,0	1/1:0,10:10:27.07:287,27,0
chr10	40689399	.	TTGTG	T	1151.70	PASS	AB=0.941;AC=31;AF=0.620;AN=50;BaseQRankSum=7.315;DP=644;FS=0.708;HRun=0;HaplotypeScore=155.8063;InbreedingCoeff=0.2099;MQ=66.79;MQ0=17;MQRankSum=-2.860;QD=2.53;ReadPosRankSum=0.857;VQSLOD=2.7152;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:26:6.44:56,6,0	0/0:8,0:7:6.02:0,6,106	./.	./.	1/1:14,1:15:5.86:40,6,0	0/0:11,1:12:9.03:0,9,167	0/0:26,0:28:7.40:0,7,158	./.	0/1:14,0:13:51.46:51,0,118	0/0:29,0:37:46.44:0,46,744	0/1:10,0:11:22.88:23,0,246	0/1:18,2:19:28.54:29,0,213	1/1:17,1:31:20.84:213,21,0	1/1:12,0:24:3:28,3,0	1/1:23,1:24:15.46:112,15,0	1/1:24,0:24:4.66:56,5,0	1/1:33,1:33:11.95:155,12,0	0/0:17,0:18:9.94:0,10,281	0/1:14,0:13:4.88:38,0,5	1/1:17,0:18:6.54:41,7,0	1/1:54,0:50:0.06:134,0,0	1/1:26,0:26:3.68:23,4,0	0/0:15,0:15:8.86:0,9,104	0/1:37,3:39:6.19:6,0,723	1/1:14,9:24:6.01:74,6,0	0/1:21,0:22:42.60:70,0,43	0/1:14,1:19:49.57:94,0,50	1/1:12,1:11:9.70:71,10,0
chr10	40689444	.	TGTGTGC	T	894.97	PASS	AB=1.000;AC=18;AF=0.321;AN=56;BaseQRankSum=7.293;DP=614;FS=6.537;HRun=0;HaplotypeScore=163.7736;InbreedingCoeff=0.4526;MQ=54.81;MQ0=26;MQRankSum=-3.364;QD=3.58;ReadPosRankSum=0.430;VQSLOD=2.1556;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:30:6.02:108,6,0	0/0:9,0:8:20.79:0,21,283	0/1:13,0:6:3.17:3,0,36	0/1:15,0:7:9.36:42,0,9	1/1:21,0:21:4.20:36,4,0	0/0:14,0:14:32.88:0,33,428	0/0:26,0:25:52.94:0,53,630	0/0:22,0:20:49.69:0,50,283	0/1:15,0:14:11.55:12,0,340	0/0:31,0:31:84.99:0,85,1509	0/0:19,0:18:23.86:0,24,628	0/0:20,0:20:43.88:0,44,651	0/1:24,0:23:67.09:230,0,67	0/0:30,0:29:6:0,6,212	1/1:30,2:31:27.16:358,27,0	1/1:16,1:17:7.61:61,8,0	1/1:35,0:34:14.66:94,15,0	0/0:18,0:17:32.51:0,33,726	0/0:19,0:16:32.53:0,33,317	0/0:18,0:16:8.69:0,9,267	0/0:56,0:52:39.47:0,39,841	1/1:0,18:18:5.96:96,6,0	0/0:17,0:16:7.91:0,8,379	0/0:36,0:36:74.98:0,75,1496	0/1:16,0:16:29.33:29,0,73	0/0:18,0:16:21.30:0,21,398	0/1:14,0:14:2.21:2,0,210	0/0:11,0:9:25.46:0,25,176
chr10	40689446	.	TGTGC	T	1065.34	PASS	AB=0.933;AC=17;AF=0.304;AN=56;BaseQRankSum=7.938;DP=617;FS=22.527;HRun=0;HaplotypeScore=147.3140;InbreedingCoeff=0.3729;MQ=55.90;MQ0=25;MQRankSum=-3.922;QD=4.26;ReadPosRankSum=0.034;VQSLOD=0.8779;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:33,0:33:6.02:80,6,0	0/0:8,0:7:20.02:0,20,179	0/1:14,0:7:3.17:3,0,36	0/1:15,0:7:9.36:42,0,9	1/1:2,19:21:5.99:76,6,0	0/0:15,0:15:34.13:0,34,360	0/0:25,0:24:29.76:0,30,453	0/0:24,0:22:55.40:0,55,315	0/0:14,0:13:0.59:0,1,201	0/0:29,0:29:78.75:0,79,1006	0/0:18,0:17:24.85:0,25,489	0/0:22,0:22:22.13:0,22,473	0/1:24,0:23:62.89:72,0,63	0/0:31,0:30:32.58:0,33,268	1/1:26,4:29:48.76:520,49,0	0/1:2,14:16:8.74:106,0,9	1/1:4,31:34:14.88:247,15,0	0/0:18,0:17:16.63:0,17,432	0/0:19,0:16:21.77:0,22,195	0/0:17,0:16:21.66:0,22,184	0/0:55,0:51:57.48:0,57,632	1/1:18,0:18:5.89:54,6,0	0/0:18,0:17:10.86:0,11,285	0/0:36,0:36:35.85:0,36,1008	0/1:18,0:18:18.75:19,0,87	0/0:18,0:16:19.40:0,19,253	0/1:14,0:14:15.75:16,0,151	0/1:12,0:10:2.25:2,0,136
chr10	40689450	.	C	CGT	796.31	PASS	AB=1.000;AC=16;AF=0.286;AN=56;BaseQRankSum=5.138;DP=632;FS=3.743;HRun=0;HaplotypeScore=139.0907;InbreedingCoeff=0.5334;MQ=59.93;MQ0=22;MQRankSum=-3.664;QD=3.40;ReadPosRankSum=2.176;VQSLOD=2.8415;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:7,31:38:5.19:21,5,0	0/0:7,0:7:21.05:0,21,272	0/0:16,0:9:11.69:0,12,93	0/1:18,0:10:1.49:1,0,75	1/1:20,0:20:5.71:65,6,0	0/1:16,0:16:4.54:5,0,63	0/0:24,0:24:17.25:0,17,121	0/1:26,0:24:19.15:19,0,57	0/0:13,0:12:8.44:0,8,97	0/0:27,0:27:61.93:0,62,772	0/0:18,0:17:31.59:0,32,535	0/0:25,0:25:57.16:0,57,770	0/0:26,0:25:13.79:0,14,88	0/0:31,0:30:0.45:0,0,17	1/1:27,0:26:49.09:617,49,0	1/1:16,0:16:8.89:68,9,0	1/1:35,2:36:14.39:104,14,0	0/0:18,0:17:40.26:0,40,491	0/0:19,0:17:4.77:0,5,35	0/1:16,0:15:5.49:5,0,21	0/0:57,0:53:4.13:0,4,126	1/1:20,0:20:5.78:59,6,0	0/0:16,0:15:33.11:0,33,475	0/0:34,0:34:71.59:0,72,988	0/0:18,0:18:21.07:0,21,295	0/0:20,0:18:14.56:0,15,99	0/0:16,0:16:19.62:0,20,132	0/0:12,0:11:10.90:0,11,62
chr10	40691085	.	A	AT	1049.38	PASS	AB=0.889;AC=7;AF=0.125;AN=56;BaseQRankSum=-6.576;DP=653;FS=1.128;HRun=12;HaplotypeScore=73.3200;InbreedingCoeff=0.8123;MQ=69.44;MQ0=0;MQRankSum=-2.215;QD=13.99;ReadPosRankSum=-0.288;VQSLOD=3.9787;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:59,1:60:99:0,119,1020	0/1:7,1:8:11.29:11,0,90	0/0:20,0:16:24.18:0,24,173	0/0:13,0:12:16.36:0,16,143	0/0:30,0:31:70.57:0,71,505	1/1:4,21:26:56.93:540,57,0	1/1:3,17:21:8.35:354,8,0	0/0:26,0:27:64.63:0,65,461	1/1:4,15:20:32.56:287,33,0	0/0:15,0:17:30.98:0,31,198	0/0:21,0:22:44.01:0,44,341	0/0:19,0:21:40.76:0,41,289	0/0:15,0:15:29.75:0,30,215	0/0:23,0:23:42.48:0,42,304	0/0:21,0:22:46.71:0,47,332	0/0:20,1:21:42.54:0,43,322	0/0:41,0:41:99:0,104,740	0/0:16,0:18:42.76:0,43,288	0/0:25,0:25:38.55:0,39,276	0/0:28,0:28:65.55:0,66,479	0/0:13,0:15:18.57:0,19,172	0/0:17,1:18:15.54:0,16,275	0/0:33,0:33:83.38:0,83,606	0/0:29,0:29:75.32:0,75,541	0/0:15,0:15:35.78:0,36,263	0/0:28,1:30:29.48:0,29,371	0/0:25,0:25:62.55:0,63,453	0/0:9,0:9:26.85:0,27,197
chr10	40691962	.	AC	A	5817.50	PASS	AB=0.938;AC=54;AF=0.964;AN=56;BaseQRankSum=-0.455;DP=323;FS=3.187;HRun=1;HaplotypeScore=121.2639;InbreedingCoeff=0.2833;MQ=63.54;MQ0=0;MQRankSum=-4.798;QD=18.01;ReadPosRankSum=1.216;VQSLOD=5.2478;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,6:14:38.66:246,39,0	1/1:1,2:3:8.10:50,8,0	0/1:6,1:7:8.69:9,0,24	0/1:8,0:8:2.95:3,0,19	1/1:13,15:28:71.85:515,72,0	1/1:6,10:16:43.28:252,43,0	1/1:5,4:9:22.90:180,23,0	1/1:1,15:16:42.65:239,43,0	1/1:5,3:8:22.50:169,23,0	1/1:9,4:13:38.69:405,39,0	1/1:6,6:12:31.36:221,31,0	1/1:2,6:8:21.14:116,21,0	1/1:8,4:12:29.99:207,30,0	1/1:8,6:14:38.61:284,39,0	1/1:5,7:12:32.60:214,33,0	1/1:5,8:13:32.09:192,32,0	1/1:6,6:12:32.23:188,32,0	1/1:6,2:8:19.88:115,20,0	1/1:6,6:12:35.26:296,35,0	1/1:5,10:15:39.73:237,40,0	1/1:4,1:5:14.47:116,14,0	1/1:3,6:9:22.93:136,23,0	1/1:3,4:7:14.86:88,15,0	1/1:2,2:4:7.54:45,8,0	1/1:8,8:16:44.09:306,44,0	1/1:12,5:17:50.27:486,50,0	1/1:6,8:14:38.96:261,39,0	1/1:9,2:11:29.29:242,29,0
chr10	40691966	.	G	GT	7534.30	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-0.353;DP=361;FS=4.867;HRun=1;HaplotypeScore=124.4736;InbreedingCoeff=0.8411;MQ=61.35;MQ0=0;MQRankSum=-4.926;QD=21.78;ReadPosRankSum=1.372;VQSLOD=4.9770;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,6:15:40.38:299,40,0	1/1:1,2:3:8.55:59,9,0	0/0:7,0:7:5.63:0,6,62	0/0:8,0:8:9.66:0,10,62	1/1:16,15:31:80.47:657,80,0	1/1:9,10:19:51.68:389,52,0	1/1:7,4:11:23.01:187,23,0	1/1:7,17:24:61.74:446,62,0	1/1:6,3:9:26.25:231,26,0	1/1:11,4:15:44.89:508,45,0	1/1:6,6:12:33.62:258,34,0	1/1:2,6:8:22.57:141,23,0	1/1:8,5:13:35.62:268,36,0	1/1:8,6:14:40.05:311,40,0	1/1:7,7:14:37.32:294,37,0	1/1:5,8:13:36.79:240,37,0	1/1:8,6:14:39.82:282,40,0	1/1:7,2:9:23.39:172,23,0	1/1:7,6:13:35.69:340,36,0	1/1:8,10:18:45.35:307,45,0	1/1:5,1:6:14.45:120,14,0	1/1:3,6:9:24.91:163,25,0	1/1:3,4:7:16.38:106,16,0	1/1:3,2:5:11.25:85,11,0	1/1:8,9:17:49.08:413,49,0	1/1:16,5:21:59.75:651,60,0	1/1:7,8:15:43.52:336,44,0	1/1:9,2:11:29.69:273,30,0
chr10	40692529	.	GACACACACACACACACAC	G	8167.59	PASS	AB=0.605;AC=10;AF=0.179;AN=56;BaseQRankSum=10.240;DP=705;FS=28.081;HRun=0;HaplotypeScore=295.2205;InbreedingCoeff=0.6968;MQ=54.15;MQ0=13;MQRankSum=-10.713;QD=41.46;ReadPosRankSum=-0.302;VQSLOD=2.8715;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:24,22:46:30.57:1446,31,0	0/0:3,0:3:3.01:0,3,48	0/0:14,0:8:9.03:0,9,144	0/0:21,0:12:14.72:0,15,227	1/1:7,11:20:25.12:1049,25,0	0/0:15,0:22:30.10:0,30,1515	0/0:20,0:27:33.11:0,33,1757	0/0:29,0:28:24.06:0,24,708	0/0:12,0:28:47.18:0,47,2516	0/0:20,0:23:45.15:0,45,2256	0/0:7,0:11:15.02:0,15,564	0/0:18,0:23:30.10:0,30,2111	0/0:13,0:20:18.53:0,19,1228	0/0:10,0:20:15.05:0,15,1196	1/1:5,32:38:48.16:2302,48,0	0/1:5,21:28:99:1984,0,151	0/1:17,16:34:30.78:529,0,31	0/0:7,0:12:18.06:0,18,798	0/0:14,0:19:33.11:0,33,1521	0/0:11,0:17:24.08:0,24,1365	0/0:49,0:54:99:0,100,5365	1/1:9,17:27:18.06:857,18,0	0/0:24,0:24:53.06:0,53,3594	0/0:49,0:56:99:0,99,6612	0/0:12,0:16:33.11:0,33,2000	0/0:20,0:30:75.26:0,75,3828	0/0:17,0:22:45.15:0,45,2513	0/0:5,0:11:30.09:0,30,1440
chr10	40697037	.	C	CAA	831.17	PASS	AB=1.000;AC=10;AF=0.500;AN=20;BaseQRankSum=-1.819;DP=128;FS=0.000;HRun=13;HaplotypeScore=60.5080;InbreedingCoeff=0.7332;MQ=99.37;MQ0=0;MQRankSum=-0.837;QD=10.94;ReadPosRankSum=-1.183;VQSLOD=1.5228;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	0/1:1,0:1:0:0,0,0	0/0:12,0:10:11.41:0,11,89	0/1:14,0:10:1.07:1,0,16	./.	./.	./.	./.	./.	1/1:3,9:15:23.98:239,24,0	1/1:4,9:15:9.84:294,10,0	0/0:10,0:10:11.81:0,12,105	./.	./.	./.	./.	./.	1/1:0,6:6:6.02:82,6,0	./.	./.	./.	./.	0/0:15,0:16:20.52:0,21,212	0/0:13,0:13:23.78:0,24,204	1/1:6,17:25:28.38:322,28,0	./.	./.	./.
chr10	40698624	.	A	AG	152.34	PASS	AB=0.944;AC=14;AF=0.368;AN=38;BaseQRankSum=4.052;DP=208;FS=13.120;HRun=0;HaplotypeScore=46.5796;InbreedingCoeff=0.2843;MQ=30.88;MQ0=1;MQRankSum=0.037;QD=2.27;ReadPosRankSum=-2.738;VQSLOD=-0.0589;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	./.	0/0:12,0:12:3.83:0,4,20	0/1:15,0:14:0.77:1,0,109	0/0:7,0:7:17.25:0,17,87	0/0:16,0:16:2.97:0,3,21	0/0:9,0:9:17.32:0,17,117	./.	0/0:13,0:13:0.17:0,0,1	0/1:10,0:10:2.51:4,0,3	1/1:12,0:11:13.08:61,13,0	./.	1/1:5,1:6:2.97:43,3,0	0/0:5,0:5:3.22:0,3,12	0/0:7,0:7:10.53:0,11,61	0/0:5,0:5:7.53:0,8,34	1/1:1,1:2:3.01:43,3,0	0/1:7,1:7:16.69:35,0,17	1/1:3,1:4:3.01:40,3,0	./.	0/0:18,0:17:2.92:0,3,24	./.	0/1:7,1:8:23.98:26,0,24	0/0:7,0:6:4.88:0,5,13	1/1:2,0:2:2.97:20,3,0
chr10	40698837	.	GAC	G	922.84	PASS	AB=0.963;AC=9;AF=0.173;AN=52;BaseQRankSum=-2.763;DP=593;FS=33.171;HRun=0;HaplotypeScore=124.5912;InbreedingCoeff=0.5002;MQ=54.36;MQ0=11;MQRankSum=1.533;QD=7.82;ReadPosRankSum=2.046;VQSLOD=1.7194;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:17.38:0,17,114	0/0:6,0:9:6:0,6,51	0/0:29,0:14:3.01:0,3,38	./.	0/1:13,0:13:0:0,0,0	1/1:9,5:13:12.03:134,12,0	1/1:17,12:32:47.63:478,48,0	0/0:21,0:20:19.30:0,19,232	1/1:11,12:23:44.82:440,45,0	0/0:27,0:26:35.87:0,36,329	./.	0/0:10,0:24:17.99:0,18,155	0/1:18,1:21:2.77:3,0,224	0/0:18,1:25:2.46:0,2,283	0/0:20,0:25:3:0,3,26	0/0:19,0:21:3.45:0,3,23	0/0:21,0:21:16.23:0,16,168	0/0:6,0:13:6:0,6,52	0/0:14,0:24:26.87:0,27,344	0/0:0,0:11:18:0,18,157	0/0:20,0:28:20.05:0,20,192	0/0:11,0:10:3.01:0,3,39	0/1:8,0:14:3.64:4,0,18	0/0:17,0:32:17.65:0,18,160	0/0:10,0:14:6:0,6,52	0/0:14,0:25:30.63:0,31,287	0/0:13,0:19:9.02:0,9,105	0/0:8,0:13:11.98:0,12,100
chr10	40698883	.	AT	A	1685.06	PASS	AB=0.880;AC=9;AF=0.161;AN=56;BaseQRankSum=12.087;DP=598;FS=222.537;HRun=1;HaplotypeScore=138.5303;InbreedingCoeff=-0.1962;MQ=57.08;MQ0=4;MQRankSum=-11.790;QD=8.43;ReadPosRankSum=3.854;VQSLOD=-0.4480;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:20:44.44:0,44,688	0/1:8,1:9:30.69:31,0,215	0/0:29,1:20:40.74:0,41,647	0/0:34,0:23:65.24:0,65,987	0/1:14,8:22:99:272,0,333	0/0:14,1:14:36.12:0,36,573	0/0:24,0:24:66.20:0,66,995	0/0:27,0:27:75.63:0,76,1102	0/0:24,1:25:67.45:0,67,1028	0/1:23,2:25:70.95:71,0,697	0/1:19,2:21:79.87:268,0,80	0/0:22,0:22:18.75:0,19,779	0/0:14,0:14:36.12:0,36,561	0/0:13,0:13:36.11:0,36,541	0/0:21,0:19:41.53:0,42,644	0/0:13,0:13:30:0,30,472	0/0:20,0:20:54.18:0,54,844	0/0:12,0:12:24.08:0,24,348	0/0:25,0:24:71.11:0,71,1019	0/1:28,8:36:99:409,0,519	0/0:19,0:19:48.07:0,48,714	0/1:10,3:13:99:125,0,299	0/1:24,0:24:99:228,0,383	0/0:31,0:30:66.20:0,66,996	0/1:24,2:26:99:336,0,268	0/1:19,3:21:86.13:86,0,673	0/0:15,2:17:6.94:0,7,582	0/0:15,0:15:36.12:0,36,542
chr10	40698885	.	A	AC	841.42	PASS	AB=0.837;AC=6;AF=0.107;AN=56;BaseQRankSum=7.570;DP=588;FS=84.930;HRun=0;HaplotypeScore=141.1534;InbreedingCoeff=-0.1319;MQ=57.73;MQ0=4;MQRankSum=-8.174;QD=5.72;ReadPosRankSum=4.623;VQSLOD=-0.0203;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:20:45.14:0,45,625	0/0:9,0:9:18.83:0,19,220	0/0:29,0:21:1:0,1,500	0/0:29,0:23:68.53:0,69,864	0/0:18,4:23:25.12:0,25,379	0/0:14,0:13:36.12:0,36,503	0/0:23,0:23:60.19:0,60,820	0/0:25,0:25:69.20:0,69,964	0/0:25,0:25:69.21:0,69,945	0/1:23,3:25:83.14:83,0,631	0/1:19,3:21:55.82:56,0,146	0/0:22,0:22:52.43:0,52,750	0/0:14,0:14:36.12:0,36,500	0/0:12,0:12:33.11:0,33,460	0/0:20,0:18:42.14:0,42,585	0/0:13,0:13:30.06:0,30,397	0/0:20,0:20:54.18:0,54,753	0/0:13,0:13:24.06:0,24,316	0/0:25,0:24:69.23:0,69,953	0/1:25,11:36:99:422,0,536	0/0:18,0:18:48.09:0,48,630	0/1:11,2:13:62.60:63,0,295	0/1:19,6:25:99:185,0,385	0/0:31,0:30:66.22:0,66,922	0/1:19,6:25:99:157,0,290	0/0:21,1:21:11.85:0,12,647	0/0:17,0:17:30.95:0,31,567	0/0:15,0:15:39.11:0,39,521
chr10	40698888	.	A	AAG	868.52	PASS	AB=0.829;AC=5;AF=0.089;AN=56;BaseQRankSum=8.097;DP=620;FS=93.876;HRun=0;HaplotypeScore=158.0824;InbreedingCoeff=-0.0987;MQ=59.36;MQ0=3;MQRankSum=-7.168;QD=7.90;ReadPosRankSum=2.659;VQSLOD=-0.3250;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:22:44.78:0,45,730	0/1:9,1:10:41.62:42,0,223	0/0:35,0:25:41.64:0,42,603	0/0:27,0:23:56.80:0,57,967	0/0:24,0:24:37.55:0,38,535	0/0:16,0:15:39.12:0,39,598	0/0:26,0:26:60.10:0,60,955	0/0:26,0:26:71.89:0,72,1124	0/0:26,0:26:66.14:0,66,1041	0/1:23,3:25:99:116,0,795	0/1:14,8:21:99:267,0,140	0/0:23,1:24:17.64:0,18,866	0/0:17,0:17:36.12:0,36,583	0/0:16,0:16:33.11:0,33,521	0/0:23,0:22:45.15:0,45,726	0/0:14,0:14:33.10:0,33,502	0/0:22,0:22:60.18:0,60,941	0/0:12,0:12:24.08:0,24,372	0/0:23,0:22:66.22:0,66,1054	0/0:35,0:35:75.87:0,76,841	0/0:17,0:17:42.14:0,42,682	0/0:13,0:13:20.75:0,21,378	0/1:20,5:25:99:156,0,451	0/0:31,0:31:72.16:0,72,1140	0/1:19,8:27:99:405,0,338	0/0:24,0:23:59.74:0,60,825	0/0:20,0:20:40.89:0,41,742	0/0:15,0:15:39.13:0,39,631
chr10	40698889	.	GA	G	264.71	PASS	AB=0.819;AC=4;AF=0.071;AN=56;BaseQRankSum=10.232;DP=647;FS=152.732;HRun=5;HaplotypeScore=160.5783;InbreedingCoeff=-0.0850;MQ=59.73;MQ0=3;MQRankSum=-9.281;QD=2.38;ReadPosRankSum=6.619;VQSLOD=-0.5113;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:57.93:0,58,678	0/0:10,0:10:13:0,13,211	0/0:38,0:26:50.76:0,51,476	0/0:28,0:24:58.53:0,59,592	0/0:23,1:24:41.47:0,41,454	0/0:24,0:23:46.48:0,46,538	0/0:26,0:26:54.17:0,54,712	0/0:25,0:25:60.67:0,61,817	0/0:26,0:26:64.09:0,64,836	0/0:25,3:27:14.14:0,14,664	0/1:20,3:22:62.54:63,0,129	0/0:25,0:25:36.67:0,37,690	0/0:17,0:17:30.08:0,30,387	0/0:18,0:18:30.02:0,30,328	0/0:23,0:22:57.03:0,57,672	0/0:14,0:14:36.08:0,36,455	0/0:21,0:21:57.18:0,57,743	0/0:13,0:13:26.10:0,26,312	0/0:24,0:23:63.02:0,63,803	0/1:24,11:35:82.03:82,0,442	0/0:18,0:18:39.12:0,39,509	0/0:12,1:13:3.71:0,4,291	0/1:19,6:25:99:119,0,243	0/0:32,0:32:71.72:0,72,856	0/1:22,6:28:99:110,0,240	0/0:26,1:26:48.92:0,49,722	0/0:20,0:20:48.86:0,49,654	0/0:16,0:16:39.13:0,39,531
chr10	40698891	.	A	AG	505.61	PASS	AB=0.834;AC=5;AF=0.089;AN=56;BaseQRankSum=8.657;DP=666;FS=115.448;HRun=0;HaplotypeScore=170.3488;InbreedingCoeff=-0.1033;MQ=59.46;MQ0=1;MQRankSum=-8.139;QD=4.21;ReadPosRankSum=4.751;VQSLOD=0.4421;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:27:60.35:0,60,703	0/1:10,1:11:17.08:17,0,191	0/0:40,0:24:43.07:0,43,614	0/0:24,0:23:43.26:0,43,704	0/0:22,0:25:18.25:0,18,406	0/0:25,0:24:49.62:0,50,517	0/0:25,0:25:54.16:0,54,718	0/0:24,0:24:63.17:0,63,863	0/0:29,0:29:63.84:0,64,735	0/1:29,3:31:67.91:68,0,670	0/1:15,8:22:99:178,0,128	0/0:25,1:26:36.91:0,37,752	0/0:19,0:19:33.10:0,33,423	0/0:18,0:18:30.09:0,30,329	0/0:23,0:22:57.11:0,57,708	0/0:15,0:15:39.06:0,39,492	0/0:21,0:21:63.11:0,63,815	0/0:13,0:13:27.08:0,27,349	0/0:25,0:24:69.13:0,69,875	0/0:37,0:37:60.75:0,61,580	0/0:19,0:19:45.09:0,45,571	0/0:12,0:13:4.95:0,5,281	0/1:21,5:26:96.39:96,0,356	0/0:30,0:30:72.15:0,72,941	0/1:19,9:28:99:263,0,314	0/0:28,0:27:73.28:0,73,836	0/0:21,0:21:54.63:0,55,708	0/0:17,0:17:45.11:0,45,591
chr10	40699783	.	C	CT	575.99	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=0.945;DP=601;FS=0.716;HRun=10;HaplotypeScore=80.4688;InbreedingCoeff=0.9624;MQ=69.96;MQ0=1;MQRankSum=0.999;QD=16.46;ReadPosRankSum=0.230;VQSLOD=3.9157;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,135,1108	0/0:16,0:16:41.92:0,42,344	0/0:21,0:16:25.03:0,25,229	0/0:13,0:10:8.77:0,9,74	0/0:24,0:25:64.74:0,65,522	0/0:15,0:15:35.95:0,36,296	0/0:18,0:20:49.98:0,50,400	0/0:27,0:27:62.52:0,63,496	0/0:20,0:21:52.98:0,53,425	0/0:20,0:20:56.92:0,57,465	0/0:15,0:15:38.95:0,39,320	0/0:23,1:24:36.93:0,37,510	1/1:1,9:10:24.06:255,24,0	1/1:4,19:25:44.77:442,45,0	0/0:22,0:23:49.96:0,50,397	0/0:11,0:13:37.04:0,37,283	0/0:27,1:28:36.92:0,37,510	0/0:21,0:23:61:0,61,480	0/0:26,0:27:67.94:0,68,547	0/0:27,0:28:73.93:0,74,596	0/0:20,0:20:50.89:0,51,413	0/0:20,0:21:21.02:0,21,366	0/0:16,0:16:35.95:0,36,295	0/0:19,0:20:36.15:0,36,340	0/0:22,1:23:21.99:0,22,387	0/0:24,0:25:64.94:0,65,523	0/0:23,0:24:64.93:0,65,518	0/0:10,0:10:23.95:0,24,197
chr10	40715478	.	GGCAAGAGT	G	26122.88	PASS	AB=0.538;AC=35;AF=0.625;AN=56;BaseQRankSum=16.428;DP=676;FS=0.642;HRun=0;HaplotypeScore=191.6645;InbreedingCoeff=0.9223;MQ=80.87;MQ0=0;MQRankSum=-18.377;QD=59.91;ReadPosRankSum=3.231;VQSLOD=4.4795;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:13,39:52:93.32:2625,93,0	0/0:10,0:10:27.09:0,27,1169	0/0:31,0:31:90.31:0,90,3779	0/0:20,0:20:54.19:0,54,2124	1/1:1,30:31:72.12:1657,72,0	1/1:2,20:22:54.14:1460,54,0	1/1:7,22:29:57.16:1541,57,0	1/1:4,22:26:63.17:1512,63,0	1/1:1,17:18:51.18:1438,51,0	0/0:28,0:28:75.25:0,75,3015	0/0:22,0:22:63.22:0,63,2708	0/0:28,0:28:81.28:0,81,3504	1/1:3,18:21:48.16:1357,48,0	1/1:2,10:12:27.09:762,27,0	1/1:4,27:31:72.25:2033,72,0	1/1:1,24:25:57.20:1611,57,0	1/1:3,25:28:60.12:1565,60,0	0/0:28,0:28:75.26:0,75,3325	1/1:3,16:19:45.14:1168,45,0	1/1:2,22:24:63.18:1667,63,0	1/1:6,15:21:33.03:749,33,0	1/1:2,12:14:36.12:1010,36,0	0/0:22,0:22:66.23:0,66,2829	0/0:35,0:35:96.33:0,96,4106	0/0:16,0:16:45.14:0,45,1887	0/1:4,24:28:54.83:1844,0,55	1/1:3,23:26:57.20:1611,57,0	1/1:3,6:9:18.06:509,18,0
chr10	40718584	.	AAAAC	A	2466.29	PASS	AB=0.931;AC=20;AF=0.357;AN=56;BaseQRankSum=-0.521;DP=540;FS=5.247;HRun=0;HaplotypeScore=130.0797;InbreedingCoeff=-0.2490;MQ=56.95;MQ0=13;MQRankSum=-3.972;QD=9.27;ReadPosRankSum=-3.594;VQSLOD=1.5495;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,4:13:12.64:301,13,0	0/0:12,0:12:33.08:0,33,700	0/0:33,0:17:18.63:0,19,221	0/0:46,0:18:9.77:0,10,145	0/1:27,0:26:96.89:111,0,97	0/1:13,1:14:85.94:217,0,86	0/1:8,1:9:46.46:93,0,46	0/1:16,0:16:86.87:229,0,87	0/1:13,1:13:86.75:109,0,87	0/0:28,0:27:60.05:0,60,1434	0/0:28,0:28:69.10:0,69,1382	0/0:16,0:16:45.11:0,45,694	0/1:15,4:19:99:320,0,105	0/1:5,10:15:53.06:153,0,53	0/1:17,0:15:48.65:83,0,49	0/1:13,1:14:54.60:143,0,55	0/1:11,0:10:2.93:71,0,3	0/0:30,0:30:81.21:0,81,1787	0/1:13,0:11:24.68:187,0,25	0/1:18,0:16:14.74:15,0,71	1/1:3,0:3:3.47:29,3,0	0/1:12,5:15:49.74:276,0,50	0/1:25,0:25:43.88:44,0,553	0/0:27,0:26:57.11:0,57,906	0/0:23,0:23:60.03:0,60,1160	0/1:14,0:14:99:240,0,107	0/0:28,0:27:14.09:0,14,238	0/1:6,0:6:11.39:11,0,106
chr10	40718585	.	A	AAAAAAAC	13547.59	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=1.558;DP=545;FS=105.694;HRun=0;HaplotypeScore=126.6895;InbreedingCoeff=0.9650;MQ=55.96;MQ0=13;MQRankSum=-10.376;QD=49.81;ReadPosRankSum=-0.726;VQSLOD=1.3167;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,4:13:36.08:1013,36,0	0/0:12,0:12:33.11:0,33,722	0/0:37,0:16:27.35:0,27,264	0/0:46,0:18:19.69:0,20,274	1/1:5,17:25:42.10:1068,42,0	1/1:13,0:13:16.44:751,16,0	1/1:9,0:9:20.39:402,20,0	1/1:3,14:18:45.05:898,45,0	1/1:13,0:12:8.69:396,9,0	0/0:28,0:27:69.19:0,69,1517	0/0:28,0:28:69.20:0,69,1503	0/0:16,0:16:44.59:0,45,717	1/1:20,0:20:48.14:1149,48,0	1/1:15,0:15:21.07:525,21,0	1/1:12,5:15:39.06:838,39,0	1/1:8,6:14:39.12:1053,39,0	1/1:9,2:10:18.03:487,18,0	0/0:30,0:30:81.21:0,81,1772	1/1:4,6:11:27.06:680,27,0	1/1:1,14:17:14.62:418,15,0	1/1:0,2:3:6.02:225,6,0	1/1:10,7:15:42.14:1120,42,0	0/0:25,0:25:50.61:0,51,750	0/0:27,0:26:57.08:0,57,933	0/0:23,0:23:60.12:0,60,1291	1/1:2,12:17:39.11:886,39,0	1/1:3,22:26:30.09:1036,30,0	1/1:0,6:6:15.05:604,15,0
chr10	40718587	.	AC	A	1809.45	PASS	AB=0.973;AC=31;AF=0.554;AN=56;BaseQRankSum=10.190;DP=526;FS=99.735;HRun=1;HaplotypeScore=115.3850;InbreedingCoeff=0.4619;MQ=56.68;MQ0=13;MQRankSum=-9.049;QD=5.64;ReadPosRankSum=-0.818;VQSLOD=-0.4295;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:12:6.87:108,7,0	0/0:12,0:12:32.86:0,33,354	0/1:36,1:16:7.33:7,0,83	0/1:43,3:19:30.67:31,0,71	0/1:20,1:20:3.93:89,0,4	1/1:10,4:14:39.04:329,39,0	1/1:8,1:9:20.48:149,20,0	0/1:14,1:15:35.63:122,0,36	1/1:11,3:13:15.45:256,15,0	0/0:29,0:28:73.56:0,74,822	0/0:26,1:27:33.68:0,34,659	0/0:18,0:18:2.63:0,3,190	1/1:20,0:20:47.58:278,48,0	1/1:15,0:15:16.38:91,16,0	1/1:16,1:15:12.04:138,12,0	0/1:14,0:14:1.44:85,0,1	1/1:9,0:8:6.86:34,7,0	0/0:31,0:31:83.21:0,83,886	1/1:9,0:7:10.69:58,11,0	0/0:17,0:15:6.87:0,7,42	0/1:3,0:3:2.49:5,0,2	1/1:17,0:15:17.19:140,17,0	0/0:22,0:22:44.69:0,45,277	0/0:27,0:26:52.02:0,52,316	0/0:22,0:22:50.34:0,50,610	0/1:14,0:14:12.82:63,0,13	1/1:25,0:24:0.74:13,1,0	1/1:6,0:6:1.41:3,1,0
chr10	40718588	.	C	CA	1598.56	PASS	AB=0.981;AC=28;AF=0.500;AN=56;BaseQRankSum=4.478;DP=534;FS=20.561;HRun=10;HaplotypeScore=119.3838;InbreedingCoeff=0.1562;MQ=56.60;MQ0=13;MQRankSum=-5.554;QD=4.23;ReadPosRankSum=2.977;VQSLOD=0.3437;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:14,0:13:11.12:11,0,16	0/1:10,1:11:5.01:5,0,169	0/1:40,0:16:6.76:7,0,61	0/1:48,0:21:1.68:2,0,25	0/1:21,0:20:19.38:19,0,32	1/1:10,0:14:28.29:218,28,0	1/1:7,0:9:5.83:51,6,0	0/1:16,0:16:0.22:0,0,72	0/1:13,1:14:13.64:131,0,14	0/0:27,3:29:1.87:0,2,421	0/0:26,0:27:54.94:0,55,421	1/1:11,7:18:11.44:312,11,0	1/1:16,0:20:20.16:113,20,0	1/1:15,0:15:9.68:47,10,0	0/1:15,0:13:14.78:15,0,48	0/1:14,0:14:0.97:1,0,52	0/1:9,0:8:14.47:19,0,14	0/0:30,0:30:74.29:0,74,610	0/0:11,0:9:2.29:0,2,16	0/0:17,0:15:8.52:0,9,50	1/1:4,0:4:4.78:18,5,0	0/1:17,0:15:17.25:17,0,41	1/1:5,17:23:17.26:371,17,0	1/1:5,21:26:20.38:397,20,0	0/0:20,0:21:43.97:0,44,349	0/0:14,0:14:12.10:0,12,68	0/1:24,0:23:11.78:15,0,12	0/0:6,0:6:0.05:0,1,0
chr10	40718599	.	CA	C	902.65	PASS	AB=0.828;AC=13;AF=0.232;AN=56;BaseQRankSum=6.385;DP=544;FS=37.712;HRun=10;HaplotypeScore=128.2286;InbreedingCoeff=0.6655;MQ=63.26;MQ0=15;MQRankSum=-4.415;QD=8.52;ReadPosRankSum=1.189;VQSLOD=-0.3032;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,8:14:16.07:133,16,0	0/0:9,1:10:0.38:0,0,212	0/0:49,0:18:22.46:0,22,188	0/0:57,0:24:23.71:0,24,205	1/1:5,12:16:32.81:269,33,0	0/0:16,0:16:42:0,42,244	0/0:12,0:12:33.49:0,33,199	0/0:15,0:15:23.47:0,23,177	0/0:15,0:14:34.38:0,34,192	0/0:29,1:29:31.56:0,32,621	0/0:23,0:24:53.85:0,54,530	0/0:17,0:17:51.09:0,51,542	0/0:24,0:24:23.29:0,23,198	0/1:11,0:11:6.11:6,0,41	1/1:4,9:11:19.99:208,20,0	1/1:4,10:14:13.48:191,13,0	0/1:3,4:6:7.25:43,0,7	0/0:30,2:32:46.01:0,46,697	0/1:9,2:9:26.38:26,0,67	0/0:15,0:13:26.20:0,26,161	0/0:4,0:4:6.73:0,7,38	1/1:6,12:16:23.96:204,24,0	0/0:23,0:23:43.45:0,43,517	0/0:27,0:27:53.75:0,54,533	0/0:17,0:17:32.56:0,33,330	0/0:17,0:17:37.48:0,37,210	0/0:24,0:23:17.90:0,18,195	0/0:8,0:8:15.48:0,15,90
chr10	40720281	.	A	AAAAAAAAAC	4965.80	PASS	AB=0.723;AC=25;AF=0.446;AN=56;BaseQRankSum=4.267;DP=360;FS=1.245;HRun=0;HaplotypeScore=129.3900;InbreedingCoeff=0.0018;MQ=64.50;MQ0=3;MQRankSum=-6.167;QD=23.10;ReadPosRankSum=-0.894;VQSLOD=4.1675;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:2,0:13:15.63:151,0,16	0/0:6,0:6:18:0,18,291	0/0:23,0:11:12.47:0,12,309	0/1:15,0:12:26.57:55,0,27	0/1:4,0:15:60.54:147,0,61	0/1:3,0:9:30.57:76,0,31	1/1:0,0:2:3.01:47,3,0	0/1:12,1:17:4.66:509,0,5	1/1:2,0:9:9.03:229,9,0	0/0:18,0:18:53.34:0,53,1202	0/0:13,0:13:31.92:0,32,783	0/0:24,0:23:54.11:0,54,1107	0/1:3,0:8:10.77:136,0,11	0/1:12,0:12:12.70:124,0,13	0/1:3,0:7:29.39:48,0,29	0/1:3,0:11:16.27:122,0,16	1/1:2,0:9:11.82:121,12,0	0/0:17,0:17:44.81:0,45,1119	1/1:8,3:13:27.05:647,27,0	0/1:10,1:14:48.45:529,0,48	0/1:2,0:2:14.64:18,0,15	1/1:2,0:8:3.24:164,3,0	0/0:14,0:14:39.08:0,39,949	0/0:16,0:16:39.12:0,39,903	0/0:14,0:14:39.07:0,39,964	0/1:12,1:23:46.15:755,0,46	0/1:10,9:22:20.40:954,0,20	1/1:2,0:2:3.01:135,3,0
chr10	40720805	.	TA	T	7808.13	PASS	AB=0.960;AC=38;AF=0.679;AN=56;BaseQRankSum=9.930;DP=585;FS=0.351;HRun=10;HaplotypeScore=63.7035;InbreedingCoeff=0.8431;MQ=76.47;MQ0=1;MQRankSum=-1.296;QD=18.46;ReadPosRankSum=2.021;VQSLOD=5.6693;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,17:22:47.97:416,48,0	0/0:11,0:11:30.08:0,30,332	0/1:19,1:16:10.54:11,0,103	0/1:25,1:22:10.78:11,0,146	1/1:4,27:31:77.86:661,78,0	1/1:1,21:22:50.98:443,51,0	1/1:2,18:20:44.99:391,45,0	1/1:5,20:25:59.94:511,60,0	1/1:1,14:16:41.03:344,41,0	0/0:27,0:27:75.20:0,75,829	0/0:26,0:26:75.18:0,75,815	0/0:13,0:13:11.18:0,11,287	1/1:1,17:18:44.99:391,45,0	1/1:4,16:20:47.99:417,48,0	1/1:3,14:17:38.99:339,39,0	1/1:3,12:15:32.95:286,33,0	1/1:1,26:27:68.99:599,69,0	0/0:13,0:13:36.10:0,36,398	1/1:6,18:24:23.77:428,24,0	1/1:2,24:26:68.94:593,69,0	1/1:0,9:9:26.99:234,27,0	1/1:0,18:18:50.99:443,51,0	0/0:40,0:40:93.24:0,93,1021	0/0:13,0:13:36.08:0,36,388	0/0:19,0:19:54.15:0,54,597	1/1:6,23:29:37.78:537,38,0	1/1:1,21:22:56.99:495,57,0	1/1:0,13:13:29.99:260,30,0
chr10	40722747	.	CT	C	19534.09	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=10.509;DP=780;FS=3.767;HRun=2;HaplotypeScore=78.2555;InbreedingCoeff=0.9992;MQ=83.96;MQ0=0;MQRankSum=-5.784;QD=35.52;ReadPosRankSum=3.383;VQSLOD=5.5772;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,62:62:99:2064,160,0	0/0:14,0:14:20.23:0,20,562	0/0:23,1:24:64.84:0,65,979	0/0:28,1:28:75.68:0,76,1065	1/1:1,33:34:93.30:1206,93,0	1/1:0,28:28:81.26:1051,81,0	1/1:1,29:30:84.27:1091,84,0	1/1:4,33:37:99:1251,102,0	1/1:1,31:32:78.25:1012,78,0	0/0:36,0:36:99:0,108,1612	0/0:19,0:19:57.19:0,57,852	0/0:26,0:26:69.23:0,69,1034	1/1:0,27:27:78.25:1013,78,0	1/1:1,28:29:75.24:974,75,0	1/1:1,33:34:93.30:1207,93,0	1/1:0,26:26:72.23:935,72,0	1/1:2,29:31:84.14:1066,84,0	0/0:22,0:21:66.12:0,66,937	1/1:0,23:23:69.22:896,69,0	1/1:0,26:26:78.25:1013,78,0	1/1:0,40:40:99:1517,117,0	1/1:0,27:27:78.25:1012,78,0	0/0:20,0:20:60.20:0,60,899	0/0:25,0:25:75.18:0,75,1055	0/0:15,0:15:45.15:0,45,674	1/1:1,25:26:75.20:942,75,0	1/1:0,24:24:69.22:895,69,0	1/1:0,14:14:30.10:389,30,0
chr10	40727013	.	A	AC	1141.08	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=0.581;DP=540;FS=4.634;HRun=8;HaplotypeScore=59.8389;InbreedingCoeff=0.8726;MQ=78.94;MQ0=0;MQRankSum=-2.805;QD=11.30;ReadPosRankSum=-0.218;VQSLOD=2.3210;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:9,0:14:8.50:44,8,0	0/0:8,0:8:24.01:0,24,220	0/0:24,0:21:29.24:0,29,266	0/0:24,0:22:20.64:0,21,335	1/1:2,0:6:6.27:35,6,0	0/0:18,0:18:45.02:0,45,412	0/0:31,0:31:84:0,84,758	0/0:22,0:22:23.98:0,24,219	0/0:32,0:32:81.03:0,81,740	0/0:25,0:25:57.01:0,57,522	0/0:22,0:22:48.01:0,48,438	0/0:25,0:25:69.02:0,69,626	1/1:4,18:22:17.67:457,18,0	1/1:1,19:20:48.14:554,48,0	1/1:8,0:12:5.64:28,6,0	0/1:8,0:8:4.22:17,0,4	1/1:11,1:12:11.59:91,12,0	0/0:21,0:21:51.01:0,51,466	0/0:15,0:16:35.05:0,35,308	0/0:22,0:22:60.02:0,60,544	0/0:21,0:21:54:0,54,488	1/1:7,0:7:14.69:101,15,0	0/0:17,0:17:39.02:0,39,356	0/0:28,0:28:75.03:0,75,686	0/0:22,0:22:57.02:0,57,521	0/0:19,0:19:45.02:0,45,411	0/0:28,0:28:75.04:0,75,686	0/0:14,0:14:33.02:0,33,301
chr10	40729546	.	TA	T	10597.54	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=16.036;DP=617;FS=1.083;HRun=8;HaplotypeScore=98.2912;InbreedingCoeff=0.9924;MQ=79.02;MQ0=0;MQRankSum=-2.004;QD=25.66;ReadPosRankSum=1.930;VQSLOD=5.0236;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,37:39:99:1043,108,0	0/0:8,0:8:18.03:0,18,203	0/0:20,1:21:13.14:0,13,426	0/0:9,0:9:14.94:0,15,138	1/1:2,22:24:63.09:608,63,0	1/1:1,14:15:42.07:406,42,0	1/1:1,13:14:39.06:377,39,0	1/1:4,28:32:78.09:744,78,0	1/1:5,26:31:75.12:724,75,0	0/0:26,0:26:75.22:0,75,886	0/0:17,0:17:48.14:0,48,567	0/0:21,0:21:57.17:0,57,688	1/1:3,20:23:60.10:579,60,0	1/1:1,19:20:57.09:550,57,0	1/1:1,13:14:39.06:377,39,0	1/1:2,9:11:24.04:232,24,0	1/1:0,34:34:99:956,99,0	0/0:24,0:24:63.19:0,63,761	1/1:3,27:30:81.08:767,81,0	1/1:2,19:21:54.08:521,54,0	1/1:3,12:15:33.05:319,33,0	1/1:1,22:23:63.09:608,63,0	0/0:22,0:22:63.18:0,63,747	0/0:27,0:29:69.03:0,69,783	0/0:27,0:27:75.23:0,75,906	1/1:3,26:29:78.07:743,78,0	1/1:2,18:20:54.08:521,54,0	1/1:0,18:18:54.09:521,54,0
chr10	40730166	.	GC	G	590.25	PASS	AB=0.875;AC=28;AF=0.933;AN=30;BaseQRankSum=-3.820;DP=37;FS=28.409;HRun=1;HaplotypeScore=21.1320;InbreedingCoeff=-0.2305;MQ=134.65;MQ0=0;MQRankSum=-2.706;QD=16.40;ReadPosRankSum=-1.539;VQSLOD=1.4779;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,2:3:6.02:76,6,0	./.	0/1:6,1:7:31.96:32,0,42	0/1:6,1:6:24.37:24,0,77	1/1:0,2:1:3.01:39,3,0	1/1:0,1:1:3.01:39,3,0	1/1:1,0:1:3.01:37,3,0	./.	1/1:0,1:1:3.01:36,3,0	./.	1/1:0,2:2:6.02:78,6,0	./.	1/1:2,0:2:6:53,6,0	./.	1/1:0,3:3:6.02:77,6,0	1/1:1,0:1:3.01:38,3,0	./.	1/1:0,1:1:3.01:39,3,0	1/1:0,1:1:3.01:39,3,0	./.	1/1:3,0:3:5.99:47,6,0	./.	./.	./.	./.	1/1:1,0:1:3:26,3,0	./.	./.
chr10	40731729	.	T	TCA	1441.10	PASS	AB=0.829;AC=30;AF=0.625;AN=48;BaseQRankSum=-1.766;DP=481;FS=4.934;HRun=0;HaplotypeScore=81.8287;InbreedingCoeff=0.2974;MQ=61.19;MQ0=4;MQRankSum=-0.479;QD=4.66;ReadPosRankSum=-2.691;VQSLOD=1.5560;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:28:15.03:178,15,0	./.	./.	./.	0/1:23,1:24:20.25:20,0,202	1/1:19,0:19:15.49:177,15,0	1/1:10,0:10:5.99:48,6,0	1/1:17,0:16:3.01:44,3,0	1/1:21,0:21:8.93:68,9,0	0/0:13,0:18:11.36:0,11,56	0/0:7,0:10:2.84:0,3,14	0/1:6,8:15:14.27:204,0,14	1/1:11,0:12:17.90:147,18,0	1/1:10,0:15:3:26,3,0	0/0:11,0:11:6:0,6,57	0/1:16,1:20:32.48:32,0,67	0/0:17,0:44:67.93:0,68,333	0/0:12,0:17:16.83:0,17,84	0/1:15,0:15:0:0,0,0	1/1:12,0:12:8.99:91,9,0	1/1:12,7:19:3.01:44,3,0	./.	0/1:12,5:18:22.79:80,0,23	0/1:13,11:22:24.24:156,0,24	0/0:16,0:22:8.52:0,9,42	1/1:20,0:19:15.30:165,15,0	1/1:9,3:12:3.01:44,3,0	1/1:7,1:8:6.01:73,6,0
chr10	40733257	.	AC	A	4279.16	PASS	AB=0.667;AC=50;AF=0.926;AN=54;BaseQRankSum=2.063;DP=286;FS=38.629;HRun=3;HaplotypeScore=113.6805;InbreedingCoeff=0.1457;MQ=39.73;MQ0=0;MQRankSum=-2.645;QD=15.01;ReadPosRankSum=3.889;VQSLOD=2.5969;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,22:22:24.08:297,24,0	1/1:0,5:5:12.04:148,12,0	0/0:1,0:1:3.01:0,3,36	0/1:4,1:4:27.20:27,0,89	0/1:0,14:14:0.01:0,0,1	1/1:0,9:9:9.03:111,9,0	1/1:0,12:12:3.01:37,3,0	1/1:0,12:12:36.11:446,36,0	1/1:0,16:16:24.08:297,24,0	1/1:1,14:15:42.13:520,42,0	1/1:0,6:6:3.01:37,3,0	1/1:0,11:11:3.01:37,3,0	1/1:0,4:4:6.02:74,6,0	1/1:0,11:11:15.05:186,15,0	1/1:1,13:14:12.04:148,12,0	1/1:0,7:7:21.07:257,21,0	1/1:0,9:9:6.02:74,6,0	1/1:0,9:9:24.08:297,24,0	1/1:0,7:7:15.05:185,15,0	1/1:0,13:13:1.37:34,1,0	1/1:0,8:8:1.30:34,1,0	1/1:0,16:16:0.13:32,0,0	1/1:0,8:8:2.97:37,3,0	1/1:0,14:14:5.89:74,6,0	1/1:1,7:8:3.01:36,3,0	1/1:0,14:14:42.13:520,42,0	1/1:0,16:16:27.08:334,27,0	./.
chr10	40734263	.	T	TAC	1000.28	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-4.800;DP=910;FS=0.685;HRun=0;HaplotypeScore=111.2270;InbreedingCoeff=0.7835;MQ=62.59;MQ0=5;MQRankSum=0.264;QD=22.73;ReadPosRankSum=1.417;VQSLOD=3.8359;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:60,0:60:99:0,117,1419	0/0:7,0:7:15.05:0,15,179	0/0:54,0:20:11.38:0,11,120	0/0:55,0:19:21.72:0,22,213	0/0:26,0:26:60.16:0,60,711	0/0:28,0:30:77.85:0,78,883	0/0:38,0:39:78.50:0,78,891	0/0:36,0:36:63.16:0,63,747	0/0:28,0:28:69.21:0,69,838	0/0:33,0:33:69.06:0,69,801	0/0:16,0:17:41.96:0,42,493	0/0:31,0:31:84.25:0,84,1021	1/1:1,19:21:5.40:599,5,0	1/1:8,15:22:2.09:497,2,0	0/0:23,0:23:60.19:0,60,738	0/0:33,0:33:84.24:0,84,1009	0/0:36,0:36:99:0,99,1212	0/0:31,0:31:64.74:0,65,812	0/0:26,0:26:46.24:0,46,604	0/0:25,0:27:50.99:0,51,597	0/0:61,0:61:99:0,142,1846	0/0:34,0:34:87.22:0,87,1018	0/0:29,0:29:72.22:0,72,884	0/0:36,0:37:82.14:0,82,1165	0/0:22,0:22:44.81:0,45,528	0/0:34,1:35:38.33:0,38,983	0/0:38,0:37:90.83:0,91,1232	0/0:18,0:18:54.14:0,54,643
chr10	40735729	.	TG	T	8555.44	PASS	AB=0.924;AC=39;AF=0.696;AN=56;BaseQRankSum=-0.445;DP=560;FS=1.050;HRun=10;HaplotypeScore=92.0611;InbreedingCoeff=0.7775;MQ=74.26;MQ0=5;MQRankSum=-2.909;QD=18.60;ReadPosRankSum=2.646;VQSLOD=5.4247;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,24:29:71.81:606,72,0	0/0:10,0:10:15.04:0,15,163	0/0:18,0:16:15.45:0,15,146	0/1:22,1:19:2.45:2,0,207	1/1:5,11:16:29.95:254,30,0	1/1:0,15:15:41.99:364,42,0	1/1:2,16:18:44.89:380,45,0	1/1:5,33:38:98.73:827,99,0	1/1:5,14:19:41.99:364,42,0	0/0:17,0:17:30.08:0,30,332	0/1:16,3:19:45.06:45,0,231	0/0:2,0:8:14.37:0,14,89	1/1:2,16:18:47.99:417,48,0	1/1:2,13:14:35.99:313,36,0	1/1:2,22:24:59.99:521,60,0	1/1:1,17:18:47.99:416,48,0	1/1:6,30:36:80.88:693,81,0	0/0:2,0:15:11.36:0,11,57	1/1:3,20:23:59.99:520,60,0	1/1:3,19:22:53.84:452,54,0	1/1:4,14:18:38.99:339,39,0	1/1:3,22:24:65.94:566,66,0	0/0:11,0:16:12.14:0,12,81	0/0:8,0:16:13.54:0,14,99	0/1:17,1:18:5.07:5,0,148	1/1:3,24:27:71.90:613,72,0	1/1:3,15:18:44.99:390,45,0	1/1:2,18:20:53.99:469,54,0
chr10	40736197	.	T	TGTGTG	11658.12	PASS	AB=0.550;AC=34;AF=0.607;AN=56;BaseQRankSum=-5.598;DP=493;FS=26.027;HRun=0;HaplotypeScore=94.7714;InbreedingCoeff=0.7867;MQ=84.38;MQ0=1;MQRankSum=-7.343;QD=38.35;ReadPosRankSum=0.121;VQSLOD=2.8288;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,30:40:60.16:1652,60,0	0/0:9,0:9:27.08:0,27,521	0/0:36,0:34:94.44:0,94,1712	0/0:21,0:22:65.88:0,66,1119	0/1:5,0:19:12.74:126,0,13	1/1:5,0:10:6.96:143,7,0	1/1:6,0:15:11.79:158,12,0	1/1:1,17:20:57.17:1371,57,0	1/1:10,0:11:13.63:137,14,0	0/0:14,0:14:36.10:0,36,701	0/0:11,0:11:33.10:0,33,635	0/0:29,0:29:87.28:0,87,1816	1/1:4,0:9:11.98:193,12,0	1/1:1,0:16:8.87:225,9,0	1/1:2,0:7:6.02:148,6,0	1/1:0,0:4:3.01:74,3,0	1/1:11,0:11:8.99:111,9,0	0/0:15,0:15:45.12:0,45,861	1/1:2,12:20:48.10:996,48,0	1/1:0,19:24:41.94:1157,42,0	1/1:5,25:33:45.15:1354,45,0	1/1:0,15:18:33.11:1011,33,0	0/0:17,0:17:51.10:0,51,1005	0/0:27,0:27:78.21:0,78,1587	0/0:9,0:9:21.04:0,21,365	0/1:2,15:22:6.54:1203,0,7	1/1:0,15:17:33.11:1035,33,0	1/1:0,6:7:18.06:565,18,0
chr10	40737562	.	CAGGA	C	3700.26	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=11.682;DP=600;FS=1.564;HRun=0;HaplotypeScore=98.5683;InbreedingCoeff=0.9903;MQ=61.07;MQ0=1;MQRankSum=2.786;QD=29.60;ReadPosRankSum=1.434;VQSLOD=3.7898;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:85.68:0,86,1903	0/0:5,0:5:12.03:0,12,254	0/0:30,0:18:20.86:0,21,327	0/0:27,0:20:36.06:0,36,559	0/0:16,0:16:39.12:0,39,920	0/0:31,0:31:90.30:0,90,2201	0/0:25,0:25:69.12:0,69,1460	1/1:8,9:17:26.97:297,27,0	0/0:13,0:13:30.09:0,30,692	0/0:18,0:18:38.98:0,39,678	0/0:20,0:20:54.06:0,54,1047	0/0:22,0:22:43.70:0,44,1083	0/0:18,0:18:39.11:0,39,862	0/0:20,0:20:50.34:0,50,851	0/0:28,0:28:69.18:0,69,1431	0/0:20,0:20:60.17:0,60,1288	0/0:29,0:29:71.96:0,72,1269	0/0:24,0:24:57.17:0,57,1324	1/1:7,13:20:39.08:572,39,0	1/1:3,15:18:33.11:551,33,0	1/1:3,20:23:42.14:719,42,0	0/0:20,0:20:54.13:0,54,1058	0/0:20,0:20:48.13:0,48,1012	0/0:34,0:33:67.87:0,68,1867	0/0:14,0:14:39.13:0,39,922	1/1:5,15:20:42.13:691,42,0	1/1:9,9:18:42.08:613,42,0	1/1:3,6:9:15.05:257,15,0
chr10	40737656	.	CAGGA	C	6662.88	PASS	AB=0.791;AC=35;AF=0.625;AN=56;BaseQRankSum=7.265;DP=451;FS=0.520;HRun=0;HaplotypeScore=93.1313;InbreedingCoeff=0.7475;MQ=59.79;MQ0=5;MQRankSum=-2.430;QD=22.43;ReadPosRankSum=4.245;VQSLOD=4.5671;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,14:26:26.19:428,26,0	0/0:6,0:6:15.02:0,15,287	0/0:19,0:9:6.54:0,7,157	0/0:27,0:19:11.48:0,11,324	1/1:11,4:15:12.04:201,12,0	1/1:11,17:28:45.01:690,45,0	1/1:7,13:20:9.91:306,10,0	1/1:14,2:14:17.37:236,17,0	1/1:3,7:10:21.07:352,21,0	0/0:12,0:12:24.08:0,24,535	0/0:12,0:12:21.07:0,21,482	0/0:12,0:12:24.52:0,25,495	0/1:4,7:11:1.93:234,0,2	1/1:3,9:12:27.09:457,27,0	1/1:9,18:27:33.58:676,34,0	1/1:6,9:15:21.07:353,21,0	1/1:3,8:11:7.04:305,7,0	0/0:7,0:6:15.01:0,15,316	0/1:11,5:15:9.39:234,0,9	1/1:5,3:8:15.02:201,15,0	1/1:15,8:20:30.10:490,30,0	1/1:8,7:15:21.07:352,21,0	0/1:9,0:9:13.02:13,0,150	0/0:37,0:37:78.27:0,78,1862	0/0:21,0:21:42.14:0,42,939	1/1:3,6:9:21.07:331,21,0	1/1:5,18:23:41.93:702,42,0	1/1:3,0:3:8.98:102,9,0
chr10	40737720	.	A	AGGGG	4711.79	PASS	AB=0.981;AC=27;AF=0.482;AN=56;BaseQRankSum=7.950;DP=310;FS=15.248;HRun=2;HaplotypeScore=97.0603;InbreedingCoeff=0.3461;MQ=46.67;MQ0=9;MQRankSum=-7.092;QD=24.29;ReadPosRankSum=1.337;VQSLOD=0.6869;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:15,0:14:13.06:293,0,13	0/0:4,0:4:8.57:0,9,183	0/0:18,0:6:18.02:0,18,325	0/0:23,0:9:21:0,21,335	1/1:12,1:13:23.98:473,24,0	1/1:21,0:21:20.42:519,20,0	0/1:20,0:18:75.91:376,0,76	0/1:14,0:14:50.67:248,0,51	1/1:14,0:14:23.93:488,24,0	0/0:12,0:11:30.57:0,31,596	0/0:7,0:6:18.06:0,18,371	0/0:8,0:8:7.68:0,8,116	1/1:5,2:6:15.05:282,15,0	1/1:12,0:12:32.38:430,32,0	1/1:6,2:7:20.39:288,20,0	1/1:7,0:5:12.04:161,12,0	1/1:4,1:5:9.03:144,9,0	0/0:10,0:9:18.25:0,18,387	0/1:4,0:3:15.19:24,0,15	0/1:9,1:8:12.35:215,0,12	0/1:11,1:11:23.51:125,0,24	0/1:9,0:9:2.01:180,0,2	0/0:6,0:6:15.05:0,15,303	0/0:21,0:21:51.14:0,51,962	0/0:7,0:7:21.07:0,21,427	1/1:8,0:6:9.86:132,10,0	0/1:9,0:9:42.61:296,0,43	0/1:6,0:6:25.85:38,0,26
chr10	40737724	.	A	AAGGG	63.31	PASS	AB=1.000;AC=14;AF=0.269;AN=52;BaseQRankSum=2.274;DP=302;FS=7.341;HRun=0;HaplotypeScore=114.6781;InbreedingCoeff=0.5009;MQ=46.49;MQ0=12;MQRankSum=-1.280;QD=0.90;ReadPosRankSum=1.053;VQSLOD=1.4783;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:15,0:14:21.28:21,0,61	0/1:4,0:4:0:0,0,0	./.	./.	0/0:14,0:14:15.52:0,16,66	0/0:20,0:20:26.26:0,26,135	0/0:20,0:18:5.53:0,6,82	0/0:13,0:13:15.08:0,15,93	0/0:14,0:14:10.67:0,11,89	0/0:11,0:10:15.05:0,15,224	0/0:7,0:6:9.03:0,9,124	1/1:2,5:8:3.48:73,3,0	1/1:6,0:5:7.64:38,8,0	0/0:12,0:12:2.77:0,3,64	1/1:8,0:7:7.71:36,8,0	0/0:5,0:3:5.09:0,5,20	1/1:6,0:5:5.29:22,5,0	0/0:13,0:11:8.95:0,9,116	0/1:4,0:3:0:0,0,0	0/0:9,0:7:8.34:0,8,41	1/1:12,0:10:1.88:4,2,0	0/0:8,0:8:14.30:0,14,78	0/0:6,0:6:9:0,9,98	0/0:20,0:20:24.04:0,24,310	0/0:7,0:7:12.04:0,12,191	0/0:7,0:5:5.95:0,6,42	0/0:9,0:9:8.43:0,8,62	0/1:7,0:7:0.74:1,0,5
chr10	40737748	.	GAGGA	G	1556.36	PASS	AB=0.897;AC=24;AF=0.429;AN=56;BaseQRankSum=6.579;DP=293;FS=13.081;HRun=0;HaplotypeScore=97.5748;InbreedingCoeff=0.2431;MQ=39.30;MQ0=15;MQRankSum=-3.975;QD=8.74;ReadPosRankSum=0.237;VQSLOD=1.5720;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:22,1:22:22.99:331,23,0	0/0:4,0:4:2.78:0,3,26	0/0:6,0:2:0.47:0,0,1	0/0:7,0:2:5.97:0,6,51	1/1:12,3:15:4.35:113,4,0	0/1:15,2:17:8.01:180,0,8	0/1:16,0:14:90.03:137,0,90	0/1:14,0:12:2.82:3,0,101	0/1:10,4:13:31.50:135,0,32	0/0:14,0:11:26.61:0,27,437	0/0:7,0:6:15:0,15,178	0/0:12,0:12:17.95:0,18,158	1/1:8,0:7:13.58:78,14,0	0/1:6,2:8:31.74:101,0,32	1/1:9,1:8:3.88:106,4,0	1/1:6,2:6:11.96:131,12,0	1/1:7,1:7:8.76:62,9,0	0/0:14,0:12:20.87:0,21,274	1/1:3,0:2:0.47:1,0,0	1/1:10,0:8:1.87:78,2,0	0/0:16,0:13:2.44:0,2,23	0/1:8,1:9:8.81:98,0,9	0/0:8,0:8:24.02:0,24,298	0/0:15,0:15:36.07:0,36,678	0/0:7,0:7:20.94:0,21,293	0/1:7,0:5:13.52:59,0,14	0/1:6,2:8:7.89:112,0,8	0/0:5,0:5:2.25:0,2,24
chr10	40738311	.	A	AGACG	26528.61	PASS	AB=0.565;AC=35;AF=0.625;AN=56;BaseQRankSum=-12.751;DP=684;FS=1.422;HRun=0;HaplotypeScore=110.0624;InbreedingCoeff=0.9185;MQ=68.75;MQ0=0;MQRankSum=-4.746;QD=56.44;ReadPosRankSum=2.666;VQSLOD=6.4859;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,31:43:90.31:2361,90,0	0/0:5,0:5:12.04:0,12,224	0/0:28,0:24:60.20:0,60,1084	0/0:22,0:22:61.70:0,62,972	1/1:4,18:23:45.15:1188,45,0	1/1:1,22:23:57.20:1517,57,0	1/1:2,24:30:68.89:1827,69,0	1/1:6,15:23:63.20:1460,63,0	1/1:2,20:23:69.24:1812,69,0	0/0:26,0:26:72.22:0,72,1275	0/0:14,0:14:33.11:0,33,615	0/0:16,0:16:48.16:0,48,895	1/1:4,12:17:39.13:1036,39,0	1/1:2,25:28:66.23:1754,66,0	1/1:4,21:25:63.22:1664,63,0	1/1:1,14:16:39.13:1034,39,0	1/1:8,37:48:80.24:2220,80,0	0/0:27,0:27:69.24:0,69,1286	1/1:9,19:31:78.21:1827,78,0	1/1:3,17:20:48.12:1187,48,0	1/1:10,27:41:51.09:1356,51,0	1/1:2,13:18:27.09:717,27,0	0/0:17,0:17:48.15:0,48,849	0/0:35,0:35:99:0,105,1949	0/0:24,0:24:72.23:0,72,1313	0/1:6,19:26:39.81:1493,0,40	1/1:3,22:28:56.71:1517,57,0	1/1:0,7:7:21.07:559,21,0
chr10	40738794	.	ATT	A	2164.06	PASS	AB=1.000;AC=35;AF=0.625;AN=56;BaseQRankSum=-3.274;DP=283;FS=7.896;HRun=2;HaplotypeScore=49.3517;InbreedingCoeff=0.7830;MQ=74.27;MQ0=2;MQRankSum=1.258;QD=13.20;ReadPosRankSum=-0.090;VQSLOD=0.1707;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:12,0:12:17.90:135,18,0	0/0:2,0:2:3:0,3,27	0/0:21,0:16:44.60:0,45,424	0/0:22,0:18:34.38:0,34,447	1/1:11,0:11:14.25:118,14,0	1/1:4,0:4:8.97:70,9,0	1/1:10,0:10:14.32:119,14,0	1/1:4,8:12:27.66:258,28,0	1/1:9,0:9:20.95:168,21,0	0/0:10,0:9:25.17:0,25,281	0/0:4,0:4:8.95:0,9,74	0/0:3,0:3:9.03:0,9,179	1/1:6,0:6:11.92:90,12,0	0/1:4,0:4:17.97:18,0,31	1/1:9,0:9:17.93:139,18,0	1/1:3,0:3:5.99:49,6,0	1/1:21,0:21:29.46:298,29,0	0/0:19,0:17:53.98:0,54,610	1/1:4,0:3:8.94:70,9,0	1/1:2,0:2:2.99:24,3,0	1/1:29,0:29:48.32:412,48,0	1/1:7,0:7:8.98:72,9,0	0/0:9,0:9:21.04:0,21,317	0/0:15,0:15:38.72:0,39,331	0/0:14,0:14:33.05:0,33,490	1/1:10,0:10:20.04:190,20,0	1/1:9,0:9:10.81:97,11,0	1/1:2,0:2:5.98:47,6,0
chr10	40739725	.	AG	A	10081.17	PASS	AB=0.775;AC=53;AF=0.946;AN=56;BaseQRankSum=-8.639;DP=454;FS=6.602;HRun=5;HaplotypeScore=70.1789;InbreedingCoeff=-0.0547;MQ=77.20;MQ0=7;MQRankSum=-0.832;QD=22.21;ReadPosRankSum=4.276;VQSLOD=3.7547;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,30:32:84.24:952,84,0	1/1:1,3:4:12.03:130,12,0	0/1:40,6:30:99:136,0,363	0/1:60,6:34:99:173,0,238	1/1:1,13:14:33.09:374,33,0	1/1:0,8:8:24.07:272,24,0	1/1:0,8:8:18.05:204,18,0	1/1:1,14:15:39.08:424,39,0	1/1:0,11:11:33.09:374,33,0	1/1:1,11:12:33.09:374,33,0	1/1:0,11:11:30.09:340,30,0	1/1:3,12:15:33.09:374,33,0	1/1:0,10:10:27.08:306,27,0	1/1:3,5:8:12.03:136,12,0	1/1:1,12:13:30.09:340,30,0	1/1:0,9:9:24.04:259,24,0	1/1:1,18:19:45.13:510,45,0	1/1:2,16:18:40.65:473,41,0	0/1:1,11:12:2.38:312,0,2	1/1:0,7:7:21.06:238,21,0	1/1:1,17:18:49.02:546,49,0	1/1:0,12:12:33.09:374,33,0	1/1:0,19:19:45.11:510,45,0	1/1:2,24:26:72.20:816,72,0	1/1:2,9:11:24.07:272,24,0	1/1:2,10:12:30.09:340,30,0	1/1:2,11:13:39.08:421,39,0	1/1:0,3:3:9.03:102,9,0
chr10	40739876	.	T	TTTTTTTTTTC	11644.08	PASS	AB=1.000;AC=37;AF=0.661;AN=56;BaseQRankSum=4.702;DP=449;FS=10.606;HRun=0;HaplotypeScore=153.7987;InbreedingCoeff=0.2782;MQ=53.05;MQ0=5;MQRankSum=-6.021;QD=30.89;ReadPosRankSum=-1.954;VQSLOD=3.4685;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,12:21:22.31:974,22,0	0/1:5,0:5:11.01:11,0,37	0/0:18,0:9:21.39:0,21,243	0/1:17,0:12:1.58:2,0,67	1/1:7,13:26:13.49:651,13,0	1/1:16,0:18:8.80:1231,9,0	1/1:7,0:6:9.02:197,9,0	1/1:42,0:40:41.24:837,41,0	1/1:13,0:14:27.02:694,27,0	0/1:22,0:20:99:222,0,169	0/1:12,0:12:76.76:222,0,77	0/0:14,0:14:15.36:0,15,491	0/1:9,0:9:18.20:152,0,18	0/1:10,0:10:68.72:95,0,69	1/1:3,6:10:9.03:373,9,0	1/1:11,0:10:5.76:171,6,0	1/1:11,13:30:32.95:1126,33,0	0/1:6,0:5:10.12:168,0,10	1/1:19,2:21:35.21:984,35,0	0/1:16,0:16:0.36:351,0,0	0/0:2,0:2:0.89:0,1,2	1/1:4,9:16:14.66:267,15,0	0/0:19,0:19:28.01:0,28,807	0/0:19,0:19:15.49:0,15,827	0/1:15,0:14:85.52:204,0,86	1/1:23,0:23:50.79:1050,51,0	1/1:16,1:16:37.40:1124,37,0	1/1:7,0:7:21.03:539,21,0
chr10	40739909	.	G	GTT	8949.05	PASS	AC=20;AF=0.370;AN=54;BaseQRankSum=-4.887;DP=415;FS=3.129;HRun=0;HaplotypeScore=65.5814;InbreedingCoeff=0.9525;MQ=47.51;MQ0=15;MQRankSum=-4.801;QD=51.43;ReadPosRankSum=-1.877;VQSLOD=4.8256;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:54.17:0,54,854	0/0:3,0:3:6.02:0,6,92	0/0:5,0:1:0:0,0,0	./.	0/0:21,0:21:48.16:0,48,759	1/1:1,17:17:54.19:1088,54,0	1/1:3,10:10:18.06:364,18,0	1/1:9,15:21:54.18:1037,54,0	1/1:1,20:22:60.21:1218,60,0	0/0:17,0:17:44.95:0,45,716	0/0:13,0:13:36.12:0,36,582	0/0:13,0:13:33.11:0,33,538	0/0:7,0:7:21.07:0,21,342	0/0:7,0:7:18.06:0,18,293	0/0:11,0:11:18.05:0,18,269	0/0:12,0:12:27.09:0,27,437	0/0:27,0:27:60.20:0,60,977	0/0:9,0:9:27.08:0,27,415	1/1:2,17:18:51.18:1029,51,0	1/1:1,24:26:72.06:1299,72,0	1/1:2,9:9:27.09:542,27,0	0/0:16,0:16:30.10:0,30,489	0/0:19,0:19:57.19:0,57,929	0/0:19,0:19:54.18:0,54,878	0/0:14,0:14:39.13:0,39,635	1/1:1,11:12:36.12:730,36,0	1/1:1,21:21:63.22:1275,63,0	1/1:1,5:6:18.06:365,18,0
chr10	40740744	.	GCACA	G	1673.79	PASS	AB=0.831;AC=36;AF=0.783;AN=46;BaseQRankSum=1.074;DP=555;FS=12.823;HRun=0;HaplotypeScore=126.6679;InbreedingCoeff=0.0973;MQ=57.79;MQ0=18;MQRankSum=-2.791;QD=3.74;ReadPosRankSum=-0.095;VQSLOD=1.6729;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:26:5.47:30,5,0	0/1:10,0:11:0.01:0,0,0	./.	./.	./.	1/1:6,2:15:9.02:118,9,0	1/1:26,9:35:12.88:89,13,0	./.	1/1:16,6:24:14.28:160,14,0	1/1:13,0:18:17.94:167,18,0	./.	0/1:16,1:22:5.44:5,0,111	0/1:22,0:19:20.56:21,0,21	0/0:22,0:22:6.83:0,7,36	1/1:14,0:14:6.01:56,6,0	1/1:17,0:16:5.75:49,6,0	1/1:19,0:19:5.79:56,6,0	0/1:17,0:26:17.93:147,0,18	1/1:11,5:14:17.36:178,17,0	1/1:6,2:8:3.01:46,3,0	0/1:45,2:49:52.34:52,0,61	1/1:20,0:18:8.96:75,9,0	0/0:11,0:15:2.74:0,3,12	0/1:24,5:47:88.93:182,0,89	1/1:13,0:16:3:28,3,0	1/1:8,1:11:12.02:142,12,0	1/1:12,1:16:5.57:163,6,0	1/1:10,0:10:3.01:39,3,0
chr10	40740789	.	CACACCACACAT	C	759.34	PASS	AB=0.924;AC=9;AF=0.161;AN=56;BaseQRankSum=7.785;DP=618;FS=25.936;HRun=0;HaplotypeScore=204.1222;InbreedingCoeff=-0.2163;MQ=53.37;MQ0=43;MQRankSum=-5.425;QD=4.34;ReadPosRankSum=1.328;VQSLOD=1.3452;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:22:96.36:118,0,96	0/0:7,0:7:6.02:0,6,134	0/0:32,0:5:8.22:0,8,132	0/0:38,0:6:5.15:0,5,120	0/0:5,0:5:11.80:0,12,75	0/1:15,1:17:56.80:57,0,113	0/0:32,0:32:47.92:0,48,497	0/0:13,0:9:23.35:0,23,206	0/0:25,0:25:36.86:0,37,501	0/1:23,0:20:45.06:45,0,595	0/0:5,0:4:6.02:0,6,157	0/0:27,0:25:61.15:0,61,2048	0/1:28,0:24:9.87:10,0,211	0/0:27,0:27:7.32:0,7,258	0/1:6,4:10:40.35:158,0,40	0/1:14,1:14:98.77:142,0,99	0/1:18,5:23:99:150,0,219	0/0:34,0:34:45.42:0,45,1454	0/0:14,0:13:31.44:0,31,336	0/0:11,0:11:11.76:0,12,163	0/0:59,0:56:80.54:0,81,970	0/1:19,1:17:59.98:199,0,60	0/0:14,0:14:18.06:0,18,524	0/0:51,0:50:99:0,114,3430	0/1:16,0:16:17.37:17,0,384	0/0:20,0:20:55.30:0,55,872	0/0:15,0:15:38.70:0,39,464	0/0:8,0:9:26.53:0,27,187
chr10	40742312	.	G	GCACA	13680.89	PASS	AB=0.866;AC=41;AF=0.732;AN=56;BaseQRankSum=-1.747;DP=816;FS=2.391;HRun=0;HaplotypeScore=166.5303;InbreedingCoeff=0.4723;MQ=63.22;MQ0=23;MQRankSum=1.276;QD=21.89;ReadPosRankSum=0.366;VQSLOD=4.2976;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:49,0:49:26.41:26,0,37	1/1:4,2:9:12.04:248,12,0	0/0:57,0:14:9.49:0,9,103	0/0:40,0:8:3.01:0,3,47	0/1:28,0:28:4.55:5,0,86	1/1:26,0:25:38.79:744,39,0	1/1:30,0:30:35.78:689,36,0	1/1:19,0:19:9.03:156,9,0	1/1:32,0:32:62.88:1199,63,0	1/1:19,12:38:56.07:953,56,0	1/1:6,4:13:12.04:287,12,0	1/1:9,21:40:78.15:1552,78,0	1/1:35,0:35:59.41:1132,59,0	1/1:23,0:23:54.19:1025,54,0	0/0:46,0:46:2.38:0,2,6	0/0:16,0:15:7.25:0,7,55	0/0:32,0:32:6.38:0,6,54	0/1:14,13:30:50.60:828,0,51	1/1:23,0:23:21.96:329,22,0	1/1:14,0:14:20.73:332,21,0	1/1:23,0:23:11.24:203,11,0	0/1:28,0:28:1.14:1,0,6	1/1:9,9:20:20.64:442,21,0	1/1:18,12:37:46.84:851,47,0	0/1:13,10:25:68.44:475,0,68	1/1:36,0:36:55.09:848,55,0	1/1:34,0:35:66.23:1072,66,0	1/1:10,0:9:18.06:284,18,0
chr10	40742323	.	C	CCACAT	3820.37	PASS	AB=0.844;AC=19;AF=0.339;AN=56;BaseQRankSum=2.539;DP=857;FS=2.589;HRun=0;HaplotypeScore=206.1072;InbreedingCoeff=-0.2643;MQ=59.20;MQ0=30;MQRankSum=-6.412;QD=7.60;ReadPosRankSum=3.393;VQSLOD=2.5593;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:81.21:0,81,1006	0/1:10,0:10:24.21:24,0,236	0/1:61,0:10:22.19:22,0,307	0/0:44,0:10:18.05:0,18,267	0/0:29,0:29:56.86:0,57,713	0/1:32,0:30:2.71:3,0,19	0/1:33,0:33:11.18:11,0,52	0/1:9,0:25:99:99,0,391	0/0:32,0:32:7.11:0,7,33	0/0:37,0:37:37.68:0,38,1225	0/1:14,0:13:12.96:13,0,302	0/1:43,0:44:99:119,0,381	0/0:38,0:38:9.85:0,10,251	0/1:23,0:23:0.29:0,0,54	0/0:44,0:44:78.03:0,78,964	0/0:16,0:15:29.74:0,30,407	0/0:35,0:35:63.06:0,63,800	0/1:26,0:26:39.13:39,0,460	0/1:4,1:25:99:448,0,167	0/1:4,0:19:27.95:367,0,28	0/1:6,0:28:47.19:140,0,47	0/0:31,0:31:39.58:0,40,503	0/1:17,0:17:22.72:23,0,266	0/1:34,0:33:20.61:21,0,549	0/1:23,0:23:5.67:6,0,496	0/1:7,0:41:99:953,0,318	1/1:0,0:35:66.23:1216,66,0	0/1:2,0:10:1.55:316,0,2
chr10	40742325	.	C	CACAT	15749.85	PASS	AB=0.996;AC=37;AF=0.661;AN=56;BaseQRankSum=3.654;DP=856;FS=18.074;HRun=0;HaplotypeScore=149.5057;InbreedingCoeff=-0.3795;MQ=58.52;MQ0=30;MQRankSum=-0.929;QD=19.44;ReadPosRankSum=12.953;VQSLOD=1.9916;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:46,0:46:22:391,0,22	0/1:9,0:9:52.83:143,0,53	0/1:60,0:9:17.35:17,0,208	0/0:46,0:10:13.99:0,14,163	0/1:28,0:28:24.25:277,0,24	1/1:1,33:35:42.10:1068,42,0	1/1:0,31:33:39.09:988,39,0	0/1:21,1:22:24.59:375,0,25	1/1:1,31:34:66.19:1714,66,0	0/1:37,0:37:99:376,0,322	0/1:14,0:13:99:167,0,115	0/1:43,0:43:84.36:900,0,84	1/1:8,30:39:65.84:1649,66,0	1/1:1,22:24:54.18:1452,54,0	1/1:45,0:45:74.90:544,75,0	0/1:16,0:15:18.23:162,0,18	0/1:33,0:33:32.66:265,0,33	0/1:26,0:26:99:500,0,212	0/1:25,0:24:99:383,0,144	1/1:17,0:18:2.10:399,2,0	0/1:30,0:29:21.13:129,0,21	1/1:32,0:32:13.17:223,13,0	0/1:16,0:16:66.76:261,0,67	0/1:32,0:31:99:426,0,117	0/1:24,0:24:99:270,0,281	0/1:41,0:41:57.07:1134,0,57	1/1:33,0:33:66.22:1211,66,0	1/1:11,0:10:8.75:325,9,0
chr10	40742327	.	C	CAT	10465.87	PASS	AB=1.000;AC=39;AF=0.696;AN=56;BaseQRankSum=5.295;DP=856;FS=15.128;HRun=0;HaplotypeScore=149.7857;InbreedingCoeff=0.0810;MQ=58.64;MQ0=30;MQRankSum=-1.424;QD=13.61;ReadPosRankSum=13.475;VQSLOD=2.1592;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:5,42:48:35.84:1229,36,0	0/1:9,0:9:6.56:7,0,59	0/1:63,0:11:7.41:7,0,214	0/0:48,0:11:14.01:0,14,156	1/1:3,27:32:25.55:836,26,0	1/1:37,0:35:20.65:405,21,0	1/1:30,0:30:38.46:397,38,0	0/1:23,0:23:99:200,0,121	1/1:32,1:33:65.53:689,66,0	0/1:37,0:37:22.75:23,0,345	0/0:14,0:13:6.53:0,7,128	0/1:42,0:42:97.07:97,0,116	1/1:34,1:35:23.86:664,24,0	1/1:24,0:24:54.14:581,54,0	1/1:1,44:46:75.26:1441,75,0	1/1:1,15:15:17.53:507,18,0	1/1:4,30:34:12.51:823,13,0	0/1:28,0:28:5.73:6,0,215	0/1:25,0:24:99:182,0,215	1/1:17,1:18:1.46:205,1,0	0/1:28,0:27:17.89:18,0,49	1/1:1,32:33:14.18:658,14,0	0/1:16,0:16:20.19:20,0,76	0/1:31,0:30:79.01:79,0,145	0/0:25,0:25:29.64:0,30,307	0/1:38,0:38:94.10:577,0,94	1/1:32,0:32:62.50:614,62,0	1/1:11,0:10:21.03:203,21,0
chr10	40742684	.	A	ACCC	25903.02	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=13.799;DP=645;FS=6.145;HRun=2;HaplotypeScore=119.2312;InbreedingCoeff=0.9861;MQ=82.95;MQ0=0;MQRankSum=-6.253;QD=56.68;ReadPosRankSum=2.938;VQSLOD=4.8220;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,46:49:99:2761,120,0	0/0:3,0:3:9.03:0,9,151	0/0:23,0:23:66.04:0,66,1003	0/0:20,0:20:54.15:0,54,835	1/1:3,24:27:60.21:1368,60,0	1/1:1,27:29:72.25:1657,72,0	1/1:2,19:21:60.21:1380,60,0	1/1:11,19:31:90.29:1891,90,0	1/1:4,19:23:56.98:1247,57,0	0/0:15,0:15:45.15:0,45,751	0/0:12,0:12:36.11:0,36,577	0/0:23,0:23:69.22:0,69,1129	1/1:4,18:22:57.20:1289,57,0	1/1:4,23:27:63.02:1345,63,0	1/1:4,22:26:66.18:1439,66,0	1/1:3,18:21:45.15:1005,45,0	1/1:4,32:36:90.27:2003,90,0	0/0:29,1:30:21.09:0,21,1377	1/1:6,16:24:66.15:1307,66,0	1/1:1,13:14:39.13:858,39,0	1/1:3,36:39:90.31:2070,90,0	1/1:2,18:20:54.19:1244,54,0	0/0:20,0:20:57.17:0,57,920	0/0:25,0:25:75.21:0,75,1224	0/0:17,0:17:51.17:0,51,852	1/1:0,19:20:60.21:1354,60,0	1/1:5,19:24:63.22:1431,63,0	1/1:1,3:4:12.04:255,12,0
chr10	40743744	.	GTGGGCATAGGAGCCCAGGGAAGCTGA	G	28546.21	PASS	AB=0.727;AC=35;AF=0.625;AN=56;BaseQRankSum=15.031;DP=597;FS=0.000;HRun=0;HaplotypeScore=430.8638;InbreedingCoeff=0.8869;MQ=80.75;MQ0=0;MQRankSum=-15.962;QD=78.42;ReadPosRankSum=5.774;VQSLOD=2.9354;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:12,8:20:24.08:1402,24,0	0/0:8,0:8:24.08:0,24,2244	0/0:20,0:20:54.19:0,54,3015	0/0:24,0:24:69.21:0,69,4036	1/1:9,6:15:12.04:620,12,0	1/1:7,8:15:21.07:1337,21,0	1/1:10,14:24:36.12:2259,36,0	1/1:18,0:18:0.46:1,0,0	1/1:9,20:29:53.71:3643,54,0	0/0:33,0:33:93.31:0,93,8497	0/0:12,0:12:36.12:0,36,3825	0/0:35,0:35:99:0,102,10822	1/1:5,10:15:27.09:1866,27,0	1/1:7,12:19:33.11:2189,33,0	1/1:8,16:24:45.15:3159,45,0	1/1:7,11:18:27.09:1861,27,0	1/1:7,16:23:30.10:2102,30,0	0/0:34,0:34:96.33:0,96,10573	1/1:13,6:19:15.01:696,15,0	1/1:11,7:18:19.83:1022,20,0	1/1:18,13:31:14.75:570,15,0	1/1:12,11:23:24.01:1425,24,0	0/0:13,0:13:33.11:0,33,3160	0/0:28,0:28:75.26:0,75,7630	0/0:26,0:26:72.25:0,72,7336	0/1:15,9:24:99:1658,0,340	1/1:7,11:18:20.75:1473,21,0	1/1:4,7:11:18.06:1264,18,0
chr10	40744616	.	AAGTGGGAGGGCCAGG	A	15479.15	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=12.911;DP=404;FS=3.680;HRun=0;HaplotypeScore=181.1732;InbreedingCoeff=0.9688;MQ=88.66;MQ0=0;MQRankSum=-14.555;QD=75.88;ReadPosRankSum=2.236;VQSLOD=4.8346;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,18:18:27.02:962,27,0	0/0:5,0:5:15.05:0,15,1119	0/0:23,0:23:66.19:0,66,2744	0/0:21,0:21:63.20:0,63,2858	1/1:4,5:9:14.89:364,15,0	1/1:1,8:9:27.08:1081,27,0	1/1:0,13:13:24.08:992,24,0	1/1:3,14:17:41.97:1038,42,0	1/1:1,7:8:21.07:870,21,0	0/0:23,0:23:66.23:0,66,4698	0/0:10,0:10:30.09:0,30,1698	0/0:28,0:28:78.25:0,78,5180	1/1:0,13:13:21.12:935,21,0	1/1:1,14:15:30.03:1206,30,0	1/1:0,15:15:36.12:1520,36,0	1/1:2,5:7:18.06:720,18,0	1/1:0,11:11:24.08:972,24,0	0/0:22,0:22:66.19:0,66,4345	1/1:4,2:6:15:449,15,0	1/1:1,8:9:15.05:463,15,0	1/1:1,13:14:15.05:343,15,0	1/1:3,7:10:23.97:643,24,0	0/0:13,0:13:36.11:0,36,2098	0/0:39,0:39:99:0,108,7234	0/0:16,0:16:48.16:0,48,3350	1/1:0,12:12:30.10:1337,30,0	1/1:2,14:16:30.10:1316,30,0	1/1:0,2:2:6.02:267,6,0
chr10	40744683	.	T	TC	1395.04	PASS	AB=0.982;AC=25;AF=0.446;AN=56;BaseQRankSum=12.387;DP=452;FS=0.532;HRun=0;HaplotypeScore=163.7475;InbreedingCoeff=0.2356;MQ=68.38;MQ0=0;MQRankSum=-10.766;QD=5.89;ReadPosRankSum=-1.068;VQSLOD=3.3491;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,1:11:3.15:50,3,0	0/0:6,0:6:18.03:0,18,229	0/0:19,0:18:45.84:0,46,521	0/0:18,0:17:38.47:0,38,429	0/1:10,0:10:9.19:73,0,9	1/1:9,0:9:6.67:46,7,0	0/1:16,0:14:7.63:120,0,8	0/1:39,0:38:99:238,0,100	0/1:15,0:15:7.01:65,0,7	0/0:29,0:29:87.26:0,87,1161	0/0:18,0:18:51.17:0,51,708	0/0:23,0:23:69.18:0,69,886	1/1:8,0:8:5.02:67,5,0	0/1:11,1:12:14.36:27,0,14	1/1:7,2:8:9.65:86,10,0	1/1:5,0:5:0.18:0,0,0	0/1:10,1:11:46.19:53,0,46	0/0:24,0:24:72.16:0,72,946	0/0:13,0:13:8.13:0,8,70	0/1:24,0:24:28.94:183,0,29	1/1:5,2:7:2.97:62,3,0	0/1:16,0:16:6.90:237,0,7	0/0:13,0:13:39.12:0,39,527	0/0:37,0:37:99:0,99,1333	0/0:15,0:15:39.12:0,39,530	0/1:23,0:23:38.84:118,0,39	1/1:17,0:17:10.83:118,11,0	1/1:5,0:5:3.81:26,4,0
chr10	40744687	.	T	TTAAAAGTGTCTTTA	32014.34	PASS	AB=0.846;AC=35;AF=0.625;AN=56;BaseQRankSum=1.575;DP=481;FS=20.387;HRun=0;HaplotypeScore=190.0005;InbreedingCoeff=0.9118;MQ=66.78;MQ0=0;MQRankSum=-13.557;QD=111.94;ReadPosRankSum=-3.359;VQSLOD=2.9807;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:7,3:10:26.91:1022,27,0	0/0:5,0:5:15.05:0,15,464	0/0:19,0:18:38.32:0,38,1093	0/0:17,0:16:31.17:0,31,789	1/1:3,3:25:26.96:1228,27,0	1/1:3,6:11:26.93:1344,27,0	1/1:13,2:14:42.08:1844,42,0	1/1:34,0:33:93.30:4370,93,0	1/1:10,4:15:44.96:2408,45,0	0/0:28,0:28:81.25:0,81,3031	0/0:17,0:17:51.13:0,51,1857	0/0:18,0:18:54.19:0,54,2223	1/1:6,3:9:23.97:1194,24,0	1/1:11,0:11:32.98:1571,33,0	1/1:7,2:8:24.01:1266,24,0	1/1:1,3:10:12.04:750,12,0	1/1:7,1:8:21.04:927,21,0	0/0:25,0:25:75.15:0,75,2699	1/1:2,3:21:60.14:2284,60,0	1/1:3,10:28:45.01:2487,45,0	1/1:7,0:7:17.84:300,18,0	1/1:4,10:22:47.95:2598,48,0	0/0:14,0:14:42.07:0,42,1390	0/0:38,0:38:99:0,105,4047	0/0:14,0:14:42.11:0,42,1528	0/1:18,4:22:70.56:2667,0,71	1/1:14,6:20:60.01:2680,60,0	1/1:1,4:8:15.05:1074,15,0
chr10	40744799	.	C	CA	8934.84	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=17.244;DP=541;FS=59.507;HRun=5;HaplotypeScore=146.7153;InbreedingCoeff=0.9988;MQ=51.09;MQ0=6;MQRankSum=-10.385;QD=27.75;ReadPosRankSum=-2.744;VQSLOD=-0.2472;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:12,17:29:60.64:687,61,0	0/0:15,0:15:42.11:0,42,451	0/0:20,0:15:29.62:0,30,270	0/0:20,0:14:33.42:0,33,324	1/1:7,19:26:63.12:649,63,0	1/1:5,16:21:54.16:655,54,0	1/1:5,13:16:42.12:482,42,0	1/1:7,8:14:28.64:325,29,0	1/1:4,7:11:30.05:347,30,0	0/0:24,0:24:63.15:0,63,671	0/0:14,0:14:39.10:0,39,418	0/0:21,0:21:54.13:0,54,580	1/1:4,8:12:32.67:351,33,0	1/1:4,11:15:38.14:406,38,0	1/1:5,7:11:24.07:272,24,0	1/1:4,5:9:22.60:222,23,0	1/1:7,12:19:42.11:483,42,0	0/0:16,0:16:45.10:0,45,475	1/1:5,13:18:51.03:563,51,0	1/1:5,14:19:48.59:565,49,0	1/1:5,14:19:51.15:611,51,0	1/1:3,19:22:57.05:621,57,0	0/0:13,0:13:33.08:0,33,355	0/0:48,0:48:99:0,129,1371	0/0:28,0:28:78.16:0,78,821	1/1:6,22:28:39.87:778,40,0	1/1:4,14:18:51.14:585,51,0	1/1:0,11:11:30.93:331,31,0
chr10	40744805	.	C	CA	9261.69	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=16.904;DP=539;FS=45.190;HRun=5;HaplotypeScore=146.0033;InbreedingCoeff=0.9988;MQ=53.99;MQ0=3;MQRankSum=-11.718;QD=28.32;ReadPosRankSum=-1.149;VQSLOD=0.8464;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,19:25:60.18:705,60,0	0/0:14,0:14:42.11:0,42,451	0/0:19,0:16:31.44:0,31,289	0/0:18,0:15:26.63:0,27,288	1/1:4,22:26:63.16:713,63,0	1/1:1,19:20:51.15:622,51,0	1/1:4,14:17:39.12:463,39,0	1/1:4,15:19:39.12:481,39,0	1/1:3,7:10:24.07:288,24,0	0/0:23,0:23:63.05:0,63,661	0/0:16,0:16:45.10:0,45,472	0/0:18,0:18:54.14:0,54,580	1/1:2,10:12:26.73:304,27,0	1/1:2,13:15:39.11:439,39,0	1/1:3,7:9:24.07:276,24,0	1/1:2,8:10:27.07:320,27,0	1/1:7,12:19:38.61:423,39,0	0/0:17,0:17:51.13:0,51,548	1/1:4,18:22:53.29:603,53,0	1/1:3,15:18:47.09:516,47,0	1/1:1,20:21:48.15:585,48,0	1/1:5,19:24:60.16:671,60,0	0/0:16,0:16:45.08:0,45,466	0/0:45,0:45:99:0,122,1295	0/0:26,0:26:69.17:0,69,742	1/1:4,24:28:47.21:881,47,0	1/1:1,17:18:48.14:566,48,0	1/1:0,11:11:33.10:405,33,0
chr10	40744820	.	A	AAAAACAG	14540.71	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=10.984;DP=568;FS=22.181;HRun=0;HaplotypeScore=185.6128;InbreedingCoeff=0.9810;MQ=55.11;MQ0=2;MQRankSum=-9.301;QD=40.50;ReadPosRankSum=-1.345;VQSLOD=3.0755;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:19,3:25:59.98:1055,60,0	0/0:17,0:17:51.15:0,51,1176	0/0:16,0:14:38.80:0,39,538	0/0:11,0:10:18.72:0,19,333	1/1:12,10:24:69.06:1627,69,0	1/1:21,0:21:57.14:723,57,0	1/1:19,0:17:48:520,48,0	1/1:32,0:32:90.04:1043,90,0	1/1:9,0:9:27.04:311,27,0	0/0:25,0:25:72.19:0,72,1383	0/0:19,0:19:54.12:0,54,1116	0/0:18,0:18:54.12:0,54,1176	1/1:10,0:12:32.67:624,33,0	1/1:14,0:17:50.26:817,50,0	1/1:9,3:11:30.05:593,30,0	1/1:11,0:11:33.02:500,33,0	1/1:21,3:26:48.02:924,48,0	0/0:21,0:21:63.16:0,63,1373	1/1:26,0:26:65.83:836,66,0	1/1:14,0:14:42.01:454,42,0	1/1:26,0:26:63.11:766,63,0	1/1:13,10:24:71.19:1611,71,0	0/0:20,0:20:57.04:0,57,1091	0/0:39,0:39:99:0,117,2724	0/0:23,0:23:69.21:0,69,1649	1/1:29,0:29:5.31:1060,5,0	1/1:19,0:19:54:582,54,0	1/1:13,0:13:39.05:493,39,0
chr10	40745244	.	A	AT	16684.28	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-0.209;DP=705;FS=1.328;HRun=4;HaplotypeScore=87.0781;InbreedingCoeff=0.9987;MQ=80.33;MQ0=0;MQRankSum=-4.632;QD=35.73;ReadPosRankSum=2.550;VQSLOD=5.0419;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,58:62:99:2218,163,0	0/0:20,0:20:54.12:0,54,591	0/0:21,0:21:51.14:0,51,572	0/0:25,0:25:51.61:0,52,567	1/1:3,25:28:69.23:944,69,0	1/1:1,16:17:42.14:575,42,0	1/1:0,21:21:60.20:821,60,0	1/1:1,23:24:69.23:941,69,0	1/1:2,25:27:75.25:1026,75,0	0/0:34,0:34:99:0,99,1116	0/0:16,0:16:42.12:0,42,476	0/0:28,0:28:75.18:0,75,830	1/1:2,10:13:33.11:436,33,0	1/1:0,18:18:54.18:739,54,0	1/1:0,32:32:87.76:1191,88,0	1/1:2,31:33:81.27:1108,81,0	1/1:4,33:37:96.32:1313,96,0	0/0:20,0:20:57.15:0,57,638	1/1:1,11:12:36.12:486,36,0	1/1:0,18:18:51.13:676,51,0	1/1:1,32:33:90.30:1231,90,0	1/1:2,20:22:54.18:738,54,0	0/0:22,0:22:63.15:0,63,694	0/0:33,0:33:96.27:0,96,1088	0/0:19,0:19:57.16:0,57,645	1/1:6,29:35:56.35:1134,56,0	1/1:1,24:25:63.21:862,63,0	1/1:1,9:10:18.06:246,18,0
chr10	40747115	.	C	CG	20138.89	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-12.543;DP=679;FS=3.665;HRun=0;HaplotypeScore=71.1947;InbreedingCoeff=0.9826;MQ=86.19;MQ0=0;MQRankSum=-3.764;QD=42.40;ReadPosRankSum=2.009;VQSLOD=5.6149;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,60:61:99:2681,169,0	0/0:8,0:8:21.07:0,21,294	0/0:23,0:23:18.61:0,19,703	0/0:25,0:26:33.82:0,34,772	1/1:1,17:18:45.15:719,45,0	1/1:0,13:13:36.12:575,36,0	1/1:1,40:41:99:1581,99,0	1/1:0,21:21:60.20:937,60,0	1/1:1,32:33:93.32:1486,93,0	0/0:35,0:35:99:0,102,1390	0/0:21,0:21:63.19:0,63,862	0/0:22,0:22:66.21:0,66,907	1/1:1,26:27:72.25:1149,72,0	1/1:0,24:24:66.23:1055,66,0	1/1:0,21:21:60.20:958,60,0	1/1:1,15:16:38.87:623,39,0	1/1:0,36:36:90.31:1438,90,0	0/0:10,0:10:30.10:0,30,418	1/1:1,21:22:60.18:922,60,0	1/1:0,11:11:33.11:527,33,0	1/1:0,61:61:99:2631,166,0	1/1:0,19:19:51.17:812,51,0	0/0:15,0:15:45.15:0,45,629	0/0:23,0:23:69.23:0,69,965	0/0:21,0:21:63.21:0,63,875	1/1:1,26:27:33.28:1098,33,0	1/1:2,20:21:57.17:885,57,0	1/1:2,0:2:6:61,6,0
chr10	40748024	.	CACACACAG	C	13495.18	PASS	AB=0.691;AC=34;AF=0.607;AN=56;BaseQRankSum=15.577;DP=808;FS=0.000;HRun=0;HaplotypeScore=238.8401;InbreedingCoeff=0.8225;MQ=59.61;MQ0=6;MQRankSum=-15.004;QD=26.51;ReadPosRankSum=-0.209;VQSLOD=3.6607;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:22,21:43:24.08:549,24,0	0/0:11,0:11:21.07:0,21,814	0/0:29,0:20:27.05:0,27,753	0/0:50,0:33:38.70:0,39,983	1/1:11,15:26:24.08:514,24,0	1/1:7,14:21:30.10:760,30,0	1/1:9,19:28:45.15:958,45,0	1/1:29,0:29:6.01:56,6,0	1/1:15,17:32:39.13:964,39,0	0/0:31,0:31:69.23:0,69,2580	0/0:20,0:20:36.12:0,36,1402	0/0:38,0:38:90.25:0,90,3370	1/1:13,16:29:48.16:1154,48,0	1/1:12,20:32:45.15:1095,45,0	1/1:12,25:37:54.18:1328,54,0	1/1:13,16:29:42.14:1045,42,0	1/1:13,9:22:12.04:286,12,0	0/0:18,0:18:39.10:0,39,1374	1/1:11,4:15:11.88:238,12,0	1/1:11,14:25:30.10:759,30,0	0/1:19,16:35:17.97:70,0,18	1/1:11,30:41:66.22:1530,66,0	0/0:25,0:25:54.19:0,54,2110	0/0:45,0:45:93.30:0,93,3498	0/0:32,0:32:63.21:0,63,2345	0/1:18,14:31:58.01:838,0,58	1/1:7,21:28:42.14:1064,42,0	1/1:1,4:5:12.04:287,12,0
chr10	40749798	.	C	CA	671.65	PASS	AB=0.672;AC=5;AF=0.089;AN=56;BaseQRankSum=6.026;DP=476;FS=0.576;HRun=0;HaplotypeScore=82.5940;InbreedingCoeff=0.1978;MQ=67.53;MQ0=8;MQRankSum=2.042;QD=8.00;ReadPosRankSum=4.796;VQSLOD=3.4489;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:72.32:0,72,733	0/0:5,0:5:5.75:0,6,30	0/0:34,0:23:67.69:0,68,783	0/0:24,0:17:12.50:0,12,448	0/1:8,10:18:31.90:167,0,32	0/0:15,0:13:24.48:0,24,218	0/0:10,0:10:20.19:0,20,201	0/0:13,0:13:20.74:0,21,175	0/0:15,0:15:32.57:0,33,268	0/0:11,0:10:18.83:0,19,146	0/0:10,0:9:14.64:0,15,125	0/0:21,0:21:60.18:0,60,787	0/0:10,0:10:6.36:0,6,39	0/0:10,0:10:8.89:0,9,53	0/1:12,9:21:23.38:163,0,23	1/1:6,8:14:7.64:192,8,0	0/1:16,15:31:66.06:264,0,66	0/0:22,0:20:27.12:0,27,211	0/0:9,0:7:11.96:0,12,102	0/0:9,0:9:3.62:0,4,21	0/0:25,0:25:15.26:0,15,140	0/0:19,0:19:38.73:0,39,404	0/0:14,0:14:42.07:0,42,522	0/0:39,0:39:99:0,117,1478	0/0:10,0:10:11.91:0,12,87	0/0:9,0:8:9.64:0,10,113	0/0:17,0:17:20.83:0,21,205	0/0:8,0:8:19.76:0,20,175
chr10	40749799	.	C	CCA	2994.90	PASS	AB=0.833;AC=16;AF=0.286;AN=56;BaseQRankSum=-1.862;DP=488;FS=22.561;HRun=0;HaplotypeScore=90.9945;InbreedingCoeff=0.5304;MQ=67.54;MQ0=8;MQRankSum=0.172;QD=14.13;ReadPosRankSum=3.051;VQSLOD=1.7032;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:17,16:33:22.98:421,0,23	0/0:5,0:5:6.22:0,6,30	0/0:34,0:23:19.77:0,20,167	0/1:23,1:17:12.44:12,0,94	1/1:8,0:18:36.09:502,36,0	0/0:15,0:13:1.25:0,1,3	0/0:10,0:10:11.87:0,12,120	0/0:13,0:13:2.34:0,2,13	0/0:15,0:15:15.39:0,15,120	0/0:13,0:12:17.47:0,17,109	0/0:9,0:9:11.36:0,11,56	0/1:23,0:24:0.40:0,0,431	1/1:1,2:12:9.03:119,9,0	0/1:8,0:14:12.58:38,0,13	1/1:5,7:21:22.74:451,23,0	1/1:7,0:15:30.09:430,30,0	1/1:17,0:31:55.73:823,56,0	0/0:20,0:18:19.89:0,20,99	0/0:9,0:7:0:0,0,0	0/0:8,0:8:5.88:0,6,37	0/0:24,0:24:8.62:0,9,45	1/1:9,10:19:24.05:376,24,0	0/0:14,0:14:21:0,21,231	0/0:41,0:41:96.17:0,96,1041	0/0:10,0:10:8.52:0,9,42	0/0:10,0:9:3.84:0,4,21	0/0:17,0:17:11.18:0,11,55	0/0:8,0:8:8.61:0,9,44
chr10	40750173	.	AGTGTGTGTGTGT	A	884.85	PASS	AB=0.714;AC=5;AF=0.089;AN=56;BaseQRankSum=3.318;DP=503;FS=0.000;HRun=0;HaplotypeScore=174.1702;InbreedingCoeff=0.6382;MQ=66.46;MQ0=11;MQRankSum=-3.417;QD=18.06;ReadPosRankSum=-1.163;VQSLOD=2.6213;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:20:12.04:0,12,441	0/0:3,0:3:9.03:0,9,424	0/0:23,0:17:22.89:0,23,777	0/0:27,0:24:36.12:0,36,1193	0/0:24,0:21:23.51:0,24,561	1/1:13,2:16:9.03:297,9,0	0/1:9,4:13:15.98:118,0,16	0/0:25,0:23:57.07:0,57,1733	1/1:11,6:15:24.08:592,24,0	0/0:24,0:23:51.17:0,51,2456	0/0:19,0:19:36.12:0,36,1680	0/0:12,0:10:24.06:0,24,907	0/0:15,0:15:26.52:0,27,1145	0/0:18,0:15:27.09:0,27,1114	0/0:22,0:21:12.04:0,12,554	0/0:17,0:16:33.11:0,33,1161	0/0:16,0:15:18.06:0,18,554	0/0:8,0:8:21.06:0,21,864	0/0:18,0:18:30.10:0,30,1167	0/0:8,0:20:2.93:0,3,118	0/0:15,0:11:27.08:0,27,806	0/0:13,0:20:8.24:0,8,262	0/0:18,0:18:41.56:0,42,1716	0/0:23,0:23:63.22:0,63,3272	0/0:13,0:13:30.10:0,30,1483	0/0:19,0:19:51.18:0,51,1754	0/0:26,0:26:72.25:0,72,3234	0/0:7,0:7:21.07:0,21,776
chr10	40750187	.	TGTGTGTGTGTGTGAGA	T	887.89	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=3.754;DP=484;FS=0.000;HRun=0;HaplotypeScore=188.6336;InbreedingCoeff=0.6359;MQ=52.03;MQ0=15;MQRankSum=-3.620;QD=18.12;ReadPosRankSum=-1.845;VQSLOD=2.3057;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:19:15.05:0,15,511	0/0:4,0:4:9.03:0,9,459	0/0:14,0:8:21.07:0,21,771	0/0:16,0:13:36.12:0,36,1195	0/0:24,0:20:25.87:0,26,603	1/1:8,7:15:9.03:306,9,0	0/1:18,0:15:71.68:113,0,72	0/0:26,0:24:69.11:0,69,1949	1/1:14,1:13:24.08:592,24,0	0/0:19,0:17:51.17:0,51,2687	0/0:16,0:16:36.12:0,36,1751	0/0:13,0:10:23.89:0,24,906	0/0:14,0:14:29.10:0,29,1290	0/0:20,0:17:30.10:0,30,1215	0/0:23,0:22:14.89:0,15,767	0/0:18,0:17:36.12:0,36,1338	0/0:12,0:11:13.35:0,13,548	0/0:8,0:8:24.07:0,24,1075	0/0:13,0:13:39.13:0,39,1633	0/0:18,0:18:3.36:0,3,133	0/0:16,0:12:30.09:0,30,998	0/0:18,0:17:7.26:0,7,260	0/0:20,0:19:48.13:0,48,2004	0/0:30,0:29:75.26:0,75,3861	0/0:14,0:14:30.10:0,30,1547	0/0:24,0:24:69.24:0,69,2484	0/0:28,0:28:81.21:0,81,4029	0/0:7,0:7:21.07:0,21,852
chr10	40750729	.	A	ATTTTG	22475.89	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-2.491;DP=646;FS=9.718;HRun=0;HaplotypeScore=108.1763;InbreedingCoeff=0.9939;MQ=70.82;MQ0=0;MQRankSum=-11.400;QD=52.76;ReadPosRankSum=0.966;VQSLOD=5.0045;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,20:23:39.13:1153,39,0	0/0:6,0:6:15.05:0,15,308	0/0:20,0:20:51.12:0,51,894	0/0:11,0:11:29.81:0,30,500	1/1:0,25:27:51.05:1281,51,0	1/1:2,20:22:39.13:1179,39,0	1/1:4,22:29:42.14:1271,42,0	1/1:9,21:34:69.18:1589,69,0	1/1:1,21:24:48.16:1454,48,0	0/0:34,0:34:86.77:0,87,1597	0/0:22,0:22:55.01:0,55,994	0/0:26,0:26:69.24:0,69,1367	1/1:3,22:26:57.20:1722,57,0	1/1:1,20:22:39:1186,39,0	1/1:3,19:24:51.18:1539,51,0	1/1:2,25:31:54.19:1642,54,0	1/1:5,11:17:18.06:548,18,0	0/0:24,0:24:66.23:0,66,1313	1/1:4,13:20:48.14:1082,48,0	1/1:4,19:23:48.09:1249,48,0	1/1:3,22:27:45.15:1281,45,0	1/1:2,14:17:32.95:743,33,0	0/0:16,0:16:48.16:0,48,983	0/0:35,0:35:90.21:0,90,1725	0/0:26,0:26:75.25:0,75,1474	1/1:1,26:30:73.39:1730,73,0	1/1:1,22:24:45.15:1369,45,0	1/1:1,5:6:15.05:458,15,0
chr10	40750838	.	GTCTCTC	G	307.97	PASS	AB=1.000;AC=17;AF=0.386;AN=44;BaseQRankSum=3.434;DP=446;FS=0.000;HRun=0;HaplotypeScore=115.0234;InbreedingCoeff=0.2218;MQ=70.32;MQ0=8;MQRankSum=-1.553;QD=2.10;ReadPosRankSum=0.299;VQSLOD=2.1160;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:2.92:0,3,33	./.	./.	./.	./.	0/0:17,0:17:0:0,0,0	0/0:11,0:11:0:0,0,0	0/0:32,0:32:9.88:0,10,77	0/0:13,0:13:3.01:0,3,41	1/1:16,2:16:4.55:99,5,0	1/1:12,2:14:3.01:60,3,0	0/0:15,0:14:3.01:0,3,46	1/1:14,0:14:2.37:8,2,0	1/1:12,0:12:3.01:42,3,0	0/1:13,0:13:40.39:48,0,40	0/0:14,0:13:3.01:0,3,44	0/1:16,0:16:15.61:32,0,16	1/1:17,1:19:4.78:64,5,0	./.	1/1:17,0:17:3.61:28,4,0	0/0:23,0:23:6.02:0,6,135	./.	1/1:10,0:10:2.59:10,3,0	0/0:17,0:20:12.04:0,12,156	0/0:15,0:15:3:0,3,25	0/0:11,0:11:3.48:0,3,42	0/1:12,0:12:42.35:42,0,64	0/0:22,0:21:1.55:0,2,4
chr10	40750892	.	CCT	C	122.52	PASS	AB=0.978;AC=17;AF=0.304;AN=56;BaseQRankSum=4.442;DP=485;FS=13.092;HRun=0;HaplotypeScore=144.3738;InbreedingCoeff=0.4203;MQ=58.90;MQ0=21;MQRankSum=-2.245;QD=0.84;ReadPosRankSum=0.036;VQSLOD=2.0739;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:12,1:13:5.16:0,5,25	0/0:5,0:5:15.05:0,15,231	0/0:32,0:12:17.66:0,18,310	0/0:63,0:19:13.09:0,13,316	0/1:18,0:17:0.17:1,0,0	0/0:15,1:16:3.19:0,3,7	0/0:14,0:13:0.71:0,1,2	1/1:11,0:10:0.71:2,1,0	0/1:17,0:17:15.43:15,0,16	0/0:16,0:13:3.39:0,3,382	0/0:15,0:15:33.58:0,34,561	0/0:16,0:15:36.07:0,36,533	1/1:9,0:9:2.60:16,3,0	1/1:11,0:11:0.59:9,1,0	1/1:11,1:12:5.53:67,6,0	0/0:16,0:15:0.37:0,0,1	1/1:15,1:16:6.82:58,7,0	0/0:20,0:19:56.99:0,57,807	0/0:8,0:8:0.47:0,0,1	0/0:21,0:21:6.61:0,7,20	0/0:12,0:12:6.41:0,6,53	0/0:22,0:22:3:0,3,28	0/1:13,1:14:6.86:7,0,547	0/0:22,1:22:19.07:0,19,566	0/0:16,0:16:45.15:0,45,739	1/1:16,0:15:6.08:31,6,0	1/1:21,0:19:0.01:52,0,0	0/0:11,0:9:0.91:0,1,2
chr10	40750920	.	CTG	C	11073.85	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=13.889;DP=529;FS=0.848;HRun=0;HaplotypeScore=132.8115;InbreedingCoeff=0.9919;MQ=66.61;MQ0=4;MQRankSum=-5.220;QD=36.79;ReadPosRankSum=3.252;VQSLOD=6.7561;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,12:14:36.12:548,36,0	0/0:7,0:7:21.07:0,21,405	0/0:36,0:22:40.57:0,41,773	0/0:51,1:32:10.98:0,11,455	1/1:0,19:19:45.15:671,45,0	1/1:5,11:16:30.10:445,30,0	1/1:0,19:19:45.15:678,45,0	1/1:1,14:15:42.12:589,42,0	1/1:1,17:18:54.18:820,54,0	0/0:22,0:21:41.19:0,41,989	0/0:23,0:23:60.19:0,60,1122	0/0:11,0:11:33.06:0,33,564	1/1:2,9:11:30.08:434,30,0	1/1:2,11:13:33.11:502,33,0	1/1:2,12:14:27.09:411,27,0	1/1:0,17:17:45.15:685,45,0	1/1:2,19:21:48.01:707,48,0	0/0:19,0:18:38.19:0,38,913	1/1:0,10:10:30.04:391,30,0	1/1:5,24:29:75.21:1081,75,0	1/1:2,9:11:21:291,21,0	1/1:0,23:23:54.18:821,54,0	0/0:16,0:16:45.15:0,45,868	0/0:19,0:19:48.16:0,48,912	0/0:22,0:22:61.06:0,61,1081	1/1:3,16:18:51.17:752,51,0	1/1:4,19:23:66.12:927,66,0	1/1:0,9:9:21.07:321,21,0
chr10	40750989	.	C	CTG	7180.50	PASS	AB=0.600;AC=23;AF=0.411;AN=56;BaseQRankSum=-2.546;DP=524;FS=3.406;HRun=0;HaplotypeScore=182.9415;InbreedingCoeff=0.9088;MQ=51.87;MQ0=0;MQRankSum=-14.304;QD=34.19;ReadPosRankSum=-1.958;VQSLOD=5.5136;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:11.90:0,12,83	0/0:11,0:11:26.44:0,26,177	0/0:15,0:14:38.34:0,38,201	0/0:13,0:12:17.98:0,18,78	0/0:25,0:25:59.72:0,60,463	1/1:3,14:17:39.13:627,39,0	1/1:3,8:11:24.08:392,24,0	1/1:8,13:21:39.58:616,40,0	1/1:3,14:17:39.13:641,39,0	0/0:28,0:28:16.21:0,16,320	0/0:23,0:23:57.47:0,57,406	0/0:10,0:10:23.78:0,24,168	1/1:3,10:13:27.09:426,27,0	1/1:5,14:19:42.12:648,42,0	0/0:26,0:26:59.62:0,60,444	0/0:17,0:17:18.44:0,18,262	0/0:32,0:32:15.74:0,16,376	0/0:18,0:18:44.58:0,45,314	1/1:6,4:10:20.93:282,21,0	1/1:7,30:37:69.40:1369,69,0	1/1:7,2:9:8.99:106,9,0	0/0:19,0:19:44.70:0,45,328	0/0:15,0:15:44.63:0,45,313	0/0:22,0:22:47.59:0,48,336	0/0:25,0:25:45.45:0,45,430	1/1:5,20:25:18.67:876,19,0	1/1:5,23:28:69.20:1107,69,0	0/1:1,2:3:12.83:90,0,13
chr10	40755938	.	A	ACACA	1468.73	PASS	AB=1.000;AC=24;AF=0.480;AN=50;BaseQRankSum=-4.889;DP=633;FS=25.540;HRun=0;HaplotypeScore=152.2285;InbreedingCoeff=0.3453;MQ=50.78;MQ0=25;MQRankSum=1.867;QD=4.74;ReadPosRankSum=0.987;VQSLOD=1.2424;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:5.99:0,6,49	0/1:11,0:11:36.92:131,0,37	./.	./.	0/0:19,0:18:0.47:0,0,1	1/1:21,0:20:26.13:459,26,0	1/1:25,0:24:6.92:125,7,0	1/1:12,0:12:0.47:1,0,0	1/1:18,0:17:3.01:52,3,0	1/1:14,5:20:18.68:255,19,0	1/1:25,0:24:5.51:84,6,0	0/0:21,0:20:15.66:0,16,123	1/1:16,0:15:3.48:55,3,0	1/1:14,0:14:3.01:70,3,0	0/0:20,0:20:18.02:0,18,167	0/0:12,0:12:6.01:0,6,56	0/0:24,0:23:10.30:0,10,109	1/1:15,0:15:15.21:178,15,0	0/0:14,0:13:0.07:0,0,34	0/0:22,0:21:3.95:0,4,49	0/1:25,0:25:1.77:2,0,99	./.	0/1:27,0:27:0.17:0,0,0	0/1:36,0:36:24.59:25,0,54	0/1:19,0:19:3.26:172,0,3	0/0:28,0:28:5.95:0,6,47	0/0:31,0:31:39.06:0,39,519	0/1:26,0:24:13.67:14,0,252
chr10	40756237	.	CCT	C	339.23	PASS	AB=0.973;AC=17;AF=0.340;AN=50;BaseQRankSum=-0.321;DP=743;FS=10.014;HRun=0;HaplotypeScore=244.0995;InbreedingCoeff=0.1391;MQ=35.19;MQ0=46;MQRankSum=-0.346;QD=1.12;ReadPosRankSum=-1.727;VQSLOD=1.0870;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:63,0:53:1.48:0,1,25	1/1:6,1:7:11.94:117,12,0	./.	./.	0/0:34,0:31:1.54:0,2,6	0/1:46,0:41:8.49:8,0,15	0/1:35,0:29:4.29:4,0,24	0/0:33,0:25:4.61:0,5,40	0/0:27,0:25:10.34:0,10,37	0/1:10,0:13:11.56:12,0,51	./.	0/0:13,0:11:16.98:0,17,151	0/1:34,0:29:6.38:6,0,15	0/1:31,0:30:8.52:9,0,41	0/0:25,0:24:2.78:0,3,12	0/0:34,0:34:11.69:0,12,92	0/0:31,0:29:5.92:0,6,39	1/1:24,1:23:4.50:223,5,0	1/1:16,0:12:0.85:4,1,0	0/0:35,0:33:3.46:0,3,32	1/1:24,0:17:0.33:1,0,0	0/1:34,0:33:1.09:1,0,9	0/0:9,0:8:8.76:0,9,97	0/1:29,0:27:15.98:16,0,162	1/1:9,0:8:6.90:71,7,0	0/0:31,0:28:11.77:0,12,72	0/0:41,0:40:9.85:0,10,81	0/0:24,0:21:1.36:0,1,20
chr10	40758710	.	T	TTACATACA	18170.03	PASS	AB=0.568;AC=45;AF=0.804;AN=56;BaseQRankSum=-0.783;DP=547;FS=0.643;HRun=0;HaplotypeScore=131.1233;InbreedingCoeff=0.7418;MQ=54.61;MQ0=4;MQRankSum=-5.987;QD=38.99;ReadPosRankSum=0.673;VQSLOD=4.4418;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,3:8:6.02:247,6,0	0/1:5,0:20:30.42:299,0,30	0/0:18,0:10:2.99:0,3,53	0/0:6,0:3:3.01:0,3,75	1/1:17,17:35:44.94:1659,45,0	1/1:23,0:23:45.15:1658,45,0	1/1:8,0:8:9.03:330,9,0	1/1:41,0:38:38.19:821,38,0	1/1:18,0:18:22.63:795,23,0	1/1:10,0:26:47.94:396,48,0	1/1:12,0:27:41.96:352,42,0	0/0:19,0:20:39.13:0,39,935	1/1:4,9:15:21.07:863,21,0	1/1:4,4:9:12.04:492,12,0	1/1:6,14:23:33.11:1357,33,0	1/1:7,4:11:15.05:604,15,0	1/1:13,3:16:9.03:370,9,0	1/1:10,0:25:32.96:270,33,0	1/1:10,1:9:15.01:428,15,0	1/1:11,14:26:27.09:1110,27,0	1/1:10,0:10:15:338,15,0	1/1:6,8:15:21.07:792,21,0	0/0:21,0:21:36.11:0,36,851	0/0:16,0:16:36.12:0,36,904	1/1:10,0:26:38.97:337,39,0	1/1:16,17:33:66.19:2250,66,0	1/1:8,14:23:39.13:1537,39,0	1/1:5,6:15:21.07:864,21,0
chr10	40758738	.	A	ATACATACC	12853.33	PASS	AB=1.000;AC=26;AF=0.464;AN=56;BaseQRankSum=0.372;DP=557;FS=13.239;HRun=0;HaplotypeScore=136.7400;InbreedingCoeff=-0.4520;MQ=56.94;MQ0=3;MQRankSum=-8.073;QD=27.06;ReadPosRankSum=8.129;VQSLOD=2.9225;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:17,0:17:99:169,0,251	0/1:19,0:18:83.88:198,0,84	0/0:22,0:15:33.01:0,33,376	0/0:6,0:4:8.96:0,9,140	0/1:26,0:26:24.02:1268,0,24	1/1:0,27:30:45.15:1937,45,0	1/1:0,10:13:9.03:388,9,0	0/1:44,0:40:99:176,0,579	1/1:2,10:15:24.08:953,24,0	0/1:23,0:23:93.12:203,0,93	0/1:23,0:23:66.69:223,0,67	0/0:18,0:18:48.12:0,48,1121	0/1:16,0:16:47.89:611,0,48	0/1:8,0:8:53.90:415,0,54	0/1:29,0:29:99:1100,0,208	0/1:12,0:12:99:190,0,105	0/1:20,0:20:99:389,0,114	0/1:23,0:23:99:141,0,111	0/1:12,0:11:99:210,0,145	0/1:26,0:25:65.87:707,0,66	0/1:13,0:13:89.92:168,0,90	0/1:14,0:14:50.90:503,0,51	0/0:18,0:18:51.09:0,51,1049	0/0:18,0:18:54.09:0,54,1159	0/1:24,0:24:76.62:163,0,77	0/1:26,0:26:99:1153,0,175	0/1:25,0:25:99:1086,0,192	0/1:17,0:17:47.91:501,0,48
chr10	40759847	.	A	AGTGTGTGT	3538.49	PASS	AB=1.000;AC=32;AF=0.615;AN=52;BaseQRankSum=1.910;DP=595;FS=2.271;HRun=0;HaplotypeScore=176.6856;InbreedingCoeff=0.6136;MQ=59.55;MQ0=19;MQRankSum=-4.686;QD=9.44;ReadPosRankSum=-3.014;VQSLOD=2.1793;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:35,0:32:4.57:59,5,0	0/0:13,0:13:11.06:0,11,209	./.	./.	0/1:14,0:13:0:2,0,0	1/1:21,0:21:13.32:322,13,0	1/1:29,0:28:13.77:231,14,0	1/1:32,0:30:7.27:116,7,0	1/1:18,0:16:9.03:184,9,0	0/0:17,0:17:6.12:0,6,191	0/0:11,0:13:6.02:0,6,122	0/0:17,0:18:20.81:0,21,371	0/0:13,0:15:15.72:0,16,322	0/0:21,0:20:18.06:0,18,353	1/1:22,0:22:15.05:236,15,0	1/1:17,0:17:11.63:188,12,0	1/1:29,0:26:27.55:545,28,0	0/1:16,0:16:61:61,0,453	1/1:17,0:17:12.04:327,12,0	1/1:15,0:12:6.02:113,6,0	1/1:39,0:37:18.79:391,19,0	0/1:18,0:18:0:2,0,0	0/1:8,0:9:11.74:12,0,184	0/0:46,0:49:75.01:0,75,1448	0/0:13,0:13:8.99:0,9,149	1/1:14,0:12:17.27:460,17,0	1/1:11,3:18:3.01:123,3,0	1/1:4,5:9:6.91:167,7,0
chr10	40760084	.	C	CG	6629.49	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=2.186;DP=353;FS=2.544;HRun=2;HaplotypeScore=49.7930;InbreedingCoeff=0.9648;MQ=66.96;MQ0=0;MQRankSum=-1.813;QD=34.35;ReadPosRankSum=1.246;VQSLOD=4.9032;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,19:20:45.15:645,45,0	0/0:6,0:6:15.02:0,15,169	0/0:27,0:23:49.77:0,50,631	0/0:19,0:16:38.55:0,39,436	1/1:1,6:7:15.05:216,15,0	1/1:0,6:6:18.06:259,18,0	1/1:2,9:11:24.08:345,24,0	1/1:1,21:22:57.10:757,57,0	1/1:1,7:8:15.05:215,15,0	0/0:15,0:15:42.10:0,42,504	0/0:17,0:17:42.09:0,42,491	0/0:12,0:12:30.09:0,30,368	1/1:0,6:6:15.05:214,15,0	1/1:2,8:10:18.06:257,18,0	1/1:0,10:10:30.06:390,30,0	1/1:1,2:3:6.02:86,6,0	1/1:0,13:12:27.09:388,27,0	0/0:26,0:26:69.20:0,69,839	1/1:1,16:17:48.16:685,48,0	1/1:1,4:5:12.04:172,12,0	1/1:1,14:15:30.10:431,30,0	1/1:0,11:11:30.10:431,30,0	0/0:11,0:11:30.05:0,30,354	0/0:10,0:10:27.04:0,27,316	0/0:17,0:16:51.13:0,51,615	1/1:0,12:12:36.12:512,36,0	1/1:0,11:11:30.10:429,30,0	1/1:2,4:6:15.04:197,15,0
chr10	40762061	.	GGGAGGCTACATCTGGGAC	G	29261.58	PASS	AB=0.559;AC=35;AF=0.625;AN=56;BaseQRankSum=16.500;DP=604;FS=1.101;HRun=0;HaplotypeScore=305.3729;InbreedingCoeff=0.9180;MQ=91.79;MQ0=0;MQRankSum=-17.251;QD=84.33;ReadPosRankSum=3.448;VQSLOD=4.0737;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,13:23:30.05:1425,30,0	0/0:7,0:7:21.07:0,21,1687	0/0:36,0:36:99:0,99,6023	0/0:28,0:28:76.50:0,77,4959	1/1:7,12:19:30.10:1209,30,0	1/1:5,8:13:27.09:1382,27,0	1/1:12,10:22:18.06:838,18,0	1/1:8,11:19:33.10:1563,33,0	1/1:3,12:15:30.10:1535,30,0	0/0:26,0:26:69.24:0,69,5366	0/0:22,0:22:63.22:0,63,4537	0/0:27,0:27:81.28:0,81,5659	1/1:4,12:16:27.09:1303,27,0	1/1:4,14:18:36.12:1801,36,0	1/1:6,17:23:42.14:1986,42,0	1/1:2,15:17:33.11:1691,33,0	1/1:8,17:25:36.12:1728,36,0	0/0:30,0:30:84.27:0,84,6477	1/1:4,6:10:18.06:814,18,0	1/1:4,25:29:60.21:2482,60,0	1/1:7,15:22:30.10:1208,30,0	1/1:8,17:25:51.18:2545,51,0	0/0:21,0:21:60.19:0,60,4629	0/0:35,0:35:99:0,99,8138	0/0:25,0:25:75.26:0,75,6375	0/1:4,15:19:99:2259,0,214	1/1:3,21:24:54.19:2723,54,0	1/1:1,7:8:15.05:768,15,0
chr10	40763099	.	GGTTC	G	3043.92	PASS	AB=0.917;AC=11;AF=0.196;AN=56;BaseQRankSum=10.568;DP=711;FS=14.672;HRun=0;HaplotypeScore=161.0497;InbreedingCoeff=0.8814;MQ=81.81;MQ0=1;MQRankSum=-11.830;QD=30.14;ReadPosRankSum=-1.259;VQSLOD=2.6877;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,126,3290	1/1:0,10:10:24.08:471,24,0	0/0:29,0:28:81.74:0,82,2084	0/0:27,0:23:53.29:0,53,1407	0/0:17,0:17:51.14:0,51,1207	0/0:18,0:18:54.19:0,54,1509	0/0:28,0:28:84.10:0,84,2021	0/0:24,0:24:56.98:0,57,1416	0/0:24,0:24:66.23:0,66,1821	1/1:0,27:27:78.02:1508,78,0	1/1:0,15:15:14.58:189,15,0	0/0:31,0:31:90.30:0,90,2444	0/0:32,0:32:96.30:0,96,2514	0/0:23,0:23:69.21:0,69,1777	0/0:26,0:26:78.21:0,78,1933	0/0:24,0:24:66.22:0,66,1754	0/0:22,0:22:63.19:0,63,1629	1/1:1,11:12:21.07:418,21,0	0/0:23,0:23:69.20:0,69,1698	0/0:24,0:24:72.24:0,72,1898	0/0:64,0:64:99:0,184,4873	0/0:18,0:18:51.13:0,51,1298	0/0:26,0:26:72.20:0,72,1819	0/0:41,0:41:99:0,120,3284	1/1:0,15:15:38.76:595,39,0	0/1:20,2:22:41.21:41,0,1490	0/0:25,0:25:72.25:0,72,1964	0/0:22,0:22:66.23:0,66,1843
chr10	40764241	.	TTGTGTGTTTGTG	T	5161.28	PASS	AB=0.973;AC=24;AF=0.444;AN=54;BaseQRankSum=10.277;DP=668;FS=1.779;HRun=0;HaplotypeScore=241.3719;InbreedingCoeff=-0.3451;MQ=52.22;MQ0=8;MQRankSum=-6.858;QD=11.15;ReadPosRankSum=3.070;VQSLOD=3.7253;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:14.57:0,15,510	1/1:3,0:5:4.54:113,5,0	0/0:22,0:14:23.05:0,23,219	0/1:26,0:11:2.72:3,0,135	0/1:26,0:26:78.82:79,0,314	0/1:18,0:18:97.92:300,0,98	0/1:33,0:33:99:243,0,328	0/0:25,0:25:56.98:0,57,513	0/1:18,0:18:99:144,0,318	1/1:16,0:17:47.93:525,48,0	./.	0/1:25,0:25:42.31:42,0,1068	0/1:27,0:27:99:604,0,192	0/1:19,0:19:89.41:170,0,89	0/1:26,0:27:99:354,0,279	0/1:23,0:23:99:114,0,235	0/1:28,0:27:96.01:96,0,256	0/1:3,15:19:9.88:251,0,10	0/1:14,0:14:99:116,0,189	0/1:30,0:30:99:160,0,376	0/0:39,0:39:73.84:0,74,655	0/1:21,0:21:99:127,0,196	0/0:17,0:17:35.99:0,36,580	0/0:26,0:26:69.10:0,69,1381	1/1:19,5:25:43.64:460,44,0	0/1:35,0:35:99:607,0,404	0/1:18,0:18:99:504,0,99	0/1:9,0:9:99:148,0,125
chr10	40764249	.	TTGTGTGTGTGTGTGTGTG	T	4197.65	PASS	AB=0.752;AC=19;AF=0.352;AN=54;BaseQRankSum=7.611;DP=660;FS=0.499;HRun=0;HaplotypeScore=302.6798;InbreedingCoeff=0.2163;MQ=50.84;MQ0=12;MQRankSum=-7.966;QD=12.72;ReadPosRankSum=3.144;VQSLOD=1.9209;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:29,24:53:49.29:423,0,49	0/1:4,0:4:25.10:25,0,83	0/0:18,0:10:3.01:0,3,44	0/0:23,0:8:6.02:0,6,133	1/1:17,11:27:20.94:449,21,0	0/0:5,0:17:3.50:0,3,78	0/0:16,0:31:15.76:0,16,435	0/0:20,0:19:15.05:0,15,298	0/1:11,0:17:0.17:0,0,253	0/1:17,0:17:1.35:1,0,548	./.	0/0:22,0:26:53.90:0,54,2491	0/1:11,0:25:79.01:449,0,79	0/1:7,0:18:99:115,0,131	1/1:15,10:26:28.91:1073,29,0	1/1:10,13:23:10.04:443,10,0	1/1:15,16:31:9.03:369,9,0	0/0:17,0:17:11.19:0,11,155	0/1:8,0:12:79.65:80,0,81	0/0:16,0:32:9.04:0,9,468	0/0:39,0:38:16.53:0,17,341	1/1:9,14:23:30:686,30,0	0/0:15,0:20:33.11:0,33,1405	0/0:24,0:35:66.70:0,67,3196	0/0:23,0:23:26.27:0,26,517	0/1:20,0:33:35.13:35,0,511	0/1:7,0:18:49.09:49,0,213	0/0:7,0:10:3.32:0,3,121
chr10	40764491	.	C	CTAT	16712.30	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-9.321;DP=553;FS=3.413;HRun=0;HaplotypeScore=66.2285;InbreedingCoeff=0.8969;MQ=63.51;MQ0=1;MQRankSum=1.092;QD=35.41;ReadPosRankSum=0.545;VQSLOD=5.1207;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,23:24:51.15:1016,51,0	1/1:1,4:5:3.01:63,3,0	0/0:17,0:14:2.02:0,2,99	0/0:12,0:11:19:0,19,266	1/1:2,32:35:78.15:1453,78,0	1/1:4,18:21:36.08:711,36,0	1/1:1,14:15:27.09:566,27,0	1/1:7,21:30:72.21:1273,72,0	1/1:4,19:23:33.11:692,33,0	1/1:3,21:24:60.21:1210,60,0	1/1:6,20:27:47.99:782,48,0	0/0:14,0:14:39.13:0,39,581	1/1:5,10:16:21.07:422,21,0	1/1:2,10:12:21.07:440,21,0	1/1:2,16:18:27.09:566,27,0	1/1:3,15:19:27.09:566,27,0	1/1:3,27:30:60.21:1248,60,0	1/1:5,18:24:25.97:692,26,0	1/1:6,10:16:33.08:562,33,0	1/1:3,23:26:60.64:1113,61,0	1/1:2,6:8:18.06:349,18,0	1/1:4,11:15:18.02:334,18,0	0/0:18,0:18:45.12:0,45,643	0/0:20,0:20:48.16:0,48,714	1/1:2,16:18:24.55:504,25,0	1/1:3,25:28:65.89:1230,66,0	1/1:5,19:26:33.11:670,33,0	1/1:2,8:11:12.04:251,12,0
chr10	40765659	.	CTCTT	C	1131.22	PASS	AB=0.994;AC=36;AF=0.667;AN=54;BaseQRankSum=1.215;DP=341;FS=1.020;HRun=0;HaplotypeScore=65.2229;InbreedingCoeff=0.2087;MQ=40.31;MQ0=21;MQRankSum=0.971;QD=5.17;ReadPosRankSum=1.404;VQSLOD=1.5984;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:9:11.49:90,11,0	1/1:5,0:5:5.78:32,6,0	0/1:25,0:3:0:0,0,0	0/0:49,0:4:2.01:0,2,40	1/1:9,0:7:2.19:23,2,0	1/1:10,0:10:2.51:17,3,0	1/1:3,7:10:5.69:34,6,0	1/1:14,0:14:5.83:145,6,0	1/1:12,0:11:11.74:74,12,0	1/1:18,0:18:32.42:244,32,0	1/1:6,0:6:2.95:25,3,0	1/1:9,0:9:6.70:46,7,0	1/1:6,0:6:3.26:46,3,0	1/1:17,0:15:9.65:92,10,0	1/1:8,0:8:2.96:19,3,0	0/1:6,0:6:0:0,0,0	0/1:10,0:10:44.74:98,0,45	0/0:6,0:6:2.98:0,3,21	0/1:6,0:6:32.14:32,0,37	1/1:10,0:9:4.32:42,4,0	./.	0/0:9,0:9:3:0,3,26	0/0:15,0:14:8.99:0,9,76	0/0:25,0:22:1.75:0,2,50	1/1:9,0:9:11.86:81,12,0	0/1:11,0:10:59.59:90,0,60	0/0:3,0:3:0.47:0,0,1	0/1:6,0:6:18.92:41,0,19
chr10	40768851	.	GA	G	4626.72	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=9.582;DP=433;FS=0.389;HRun=8;HaplotypeScore=46.2304;InbreedingCoeff=0.9617;MQ=72.82;MQ0=0;MQRankSum=0.476;QD=23.85;ReadPosRankSum=-0.436;VQSLOD=4.9380;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:75.23:0,75,905	0/0:7,0:7:21.06:0,21,254	0/0:13,0:14:25.05:0,25,244	0/0:3,0:2:3.01:0,3,36	0/0:23,0:23:63.18:0,63,749	1/1:0,22:22:57.09:550,57,0	1/1:0,9:9:27.04:261,27,0	1/1:5,30:35:84.11:806,84,0	1/1:2,8:10:21.03:203,21,0	0/0:18,0:18:42.13:0,42,507	0/0:20,0:20:51.16:0,51,616	0/0:13,0:13:33.10:0,33,399	1/1:2,3:5:9.01:87,9,0	1/1:0,9:9:18.03:174,18,0	0/0:11,0:11:33.09:0,33,387	0/0:7,0:7:18.06:0,18,217	0/0:26,0:26:75.18:0,75,888	0/0:22,0:22:63.15:0,63,744	1/1:2,18:22:55.13:492,55,0	1/1:2,20:22:51.07:491,51,0	1/1:0,6:6:18.03:174,18,0	0/0:8,0:8:21.06:0,21,254	0/0:9,0:10:29.96:0,30,341	0/0:9,0:9:24.07:0,24,290	0/0:23,0:23:63.19:0,63,761	1/1:1,24:25:72.11:694,72,0	1/1:2,15:17:42.07:406,42,0	1/1:0,12:12:30.05:290,30,0
chr10	40770075	.	G	GCAGGAAATGTAT	6152.71	PASS	AB=0.944;AC=52;AF=0.963;AN=54;BaseQRankSum=3.231;DP=380;FS=1.702;HRun=0;HaplotypeScore=206.7070;InbreedingCoeff=-0.0667;MQ=61.28;MQ0=0;MQRankSum=-4.012;QD=16.28;ReadPosRankSum=-1.079;VQSLOD=3.9271;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:9,0:21:30.47:265,30,0	1/1:7,0:11:9.01:84,9,0	0/1:7,1:8:99:226,0,149	0/1:7,0:7:37.72:38,0,175	1/1:9,0:12:5.97:44,6,0	1/1:7,0:10:9.01:86,9,0	1/1:7,0:13:17.98:151,18,0	1/1:0,0:20:60.20:856,60,0	1/1:14,0:19:14.76:115,15,0	1/1:10,0:18:47.50:537,48,0	1/1:8,0:9:2.99:24,3,0	1/1:13,0:23:30.02:279,30,0	1/1:5,0:9:11.82:107,12,0	1/1:7,0:11:10.43:178,10,0	1/1:6,0:14:21.01:190,21,0	1/1:8,0:11:15.01:138,15,0	1/1:7,0:16:36.01:505,36,0	1/1:2,0:5:9.03:144,9,0	1/1:6,0:9:27.09:408,27,0	1/1:8,0:12:12.01:110,12,0	1/1:7,0:17:29.78:248,30,0	1/1:10,0:24:38.87:314,39,0	1/1:6,0:10:11.83:86,12,0	1/1:7,0:13:14.87:111,15,0	1/1:14,0:23:26.91:231,27,0	1/1:18,0:22:54.15:622,54,0	1/1:9,0:11:6.01:56,6,0	./.
chr10	40770226	.	GC	G	6230.26	PASS	AB=1.000;AC=53;AF=0.946;AN=56;BaseQRankSum=2.936;DP=381;FS=4.747;HRun=1;HaplotypeScore=205.5313;InbreedingCoeff=0.3667;MQ=48.40;MQ0=0;MQRankSum=-1.966;QD=16.48;ReadPosRankSum=1.888;VQSLOD=5.0491;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,27:29:74.63:581,75,0	1/1:1,6:7:14.87:108,15,0	0/0:3,0:3:3.01:0,3,32	0/1:5,0:5:12.55:34,0,13	1/1:2,9:11:5.92:49,6,0	1/1:3,12:15:14.18:262,14,0	1/1:1,21:22:62.85:497,63,0	1/1:3,9:12:35.47:248,35,0	1/1:2,6:8:20.90:161,21,0	1/1:4,20:24:60.15:443,60,0	1/1:4,6:10:8.99:75,9,0	1/1:1,15:16:44.82:360,45,0	1/1:0,6:6:17.95:141,18,0	1/1:1,11:12:32.78:247,33,0	1/1:1,7:8:20.87:168,21,0	1/1:2,4:6:11.97:95,12,0	1/1:2,16:18:47.79:367,48,0	1/1:2,11:13:17.68:226,18,0	1/1:1,12:13:20.57:229,21,0	1/1:0,5:5:11.97:96,12,0	1/1:7,38:45:35.19:263,35,0	1/1:1,16:17:28.27:193,28,0	1/1:3,5:8:11.91:90,12,0	1/1:1,10:11:11.96:96,12,0	1/1:1,13:14:41.64:318,42,0	1/1:2,19:21:56.76:438,57,0	1/1:0,11:11:32.87:255,33,0	1/1:4,7:11:26.71:190,27,0
chr10	40770235	.	GC	G	5538.40	PASS	AB=1.000;AC=49;AF=0.875;AN=56;BaseQRankSum=0.970;DP=406;FS=16.167;HRun=3;HaplotypeScore=207.7764;InbreedingCoeff=-0.1373;MQ=59.40;MQ0=0;MQRankSum=-1.255;QD=13.64;ReadPosRankSum=6.693;VQSLOD=2.3487;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:30:1.27:375,0,1	0/1:7,0:7:10.95:89,0,11	0/1:8,0:7:18.03:71,0,18	0/1:8,0:7:4.64:79,0,5	1/1:10,0:10:8.82:66,9,0	0/1:16,0:16:25.16:161,0,25	1/1:28,0:28:52.64:470,53,0	0/1:14,0:14:2.38:193,0,2	1/1:10,0:10:29.68:216,30,0	1/1:25,0:25:50.59:407,51,0	1/1:7,0:7:3.89:35,4,0	1/1:20,0:20:17.28:256,17,0	0/1:6,0:6:5.21:79,0,5	1/1:13,0:13:35.74:260,36,0	1/1:10,0:10:23.66:170,24,0	1/1:4,0:4:11.93:88,12,0	1/1:19,0:19:4.91:273,5,0	1/1:16,0:16:40.63:271,41,0	1/1:14,0:14:6.79:162,7,0	1/1:6,0:6:14.94:117,15,0	1/1:34,8:42:25.72:201,26,0	1/1:13,0:13:11.87:101,12,0	1/1:8,0:8:14.83:113,15,0	1/1:13,0:13:10.79:114,11,0	1/1:15,0:15:38.90:320,39,0	1/1:21,0:21:33.89:407,34,0	1/1:12,0:12:15.80:226,16,0	1/1:11,0:11:26.93:219,27,0
chr10	40771016	.	AGTGTGT	A	885.32	PASS	AB=0.926;AC=16;AF=0.320;AN=50;BaseQRankSum=3.818;DP=524;FS=22.187;HRun=0;HaplotypeScore=121.3042;InbreedingCoeff=0.1375;MQ=69.40;MQ0=18;MQRankSum=-0.376;QD=3.80;ReadPosRankSum=0.962;VQSLOD=0.9776;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:22,2:22:8.79:82,9,0	0/0:11,0:11:8.90:0,9,66	./.	0/0:28,0:21:2.98:0,3,22	0/0:15,0:15:3:0,3,25	0/1:10,0:11:18.45:27,0,18	0/1:26,0:25:12.11:12,0,72	./.	0/0:17,0:17:13.08:0,13,92	0/0:20,0:19:21.80:0,22,217	0/0:8,0:8:3.01:0,3,32	0/0:21,0:21:27.03:0,27,445	0/0:18,0:17:3.41:0,3,19	0/0:17,0:16:9.96:0,10,123	0/1:17,0:19:35.67:36,0,58	1/1:14,2:16:15.05:242,15,0	0/1:19,0:21:34.75:133,0,35	0/0:22,0:20:9.59:0,10,59	1/1:24,1:26:15.08:170,15,0	./.	0/1:26,0:25:18.54:50,0,19	1/1:11,5:16:13.50:98,13,0	0/0:14,0:13:18.14:0,18,353	0/0:23,0:23:24.07:0,24,522	0/0:20,0:20:11.85:0,12,167	0/1:16,0:17:36.54:37,0,61	0/1:15,0:17:20.37:129,0,20	0/1:8,0:7:13.69:32,0,14
chr10	40771046	.	TGTGTGTGTGTGA	T	1974.05	PASS	AB=1.000;AC=25;AF=0.521;AN=48;BaseQRankSum=2.157;DP=552;FS=2.066;HRun=0;HaplotypeScore=145.8581;InbreedingCoeff=0.0067;MQ=38.73;MQ0=74;MQRankSum=-2.086;QD=4.90;ReadPosRankSum=-3.839;VQSLOD=1.5143;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:20:8.08:66,8,0	0/0:11,0:11:8.43:0,8,109	./.	./.	./.	0/1:13,0:10:7.57:33,0,8	0/1:27,0:21:52.14:66,0,52	0/1:15,0:11:9.24:55,0,9	0/1:23,0:21:27.81:30,0,28	0/1:27,0:20:5.12:5,0,170	0/0:7,0:5:3.01:0,3,65	0/0:22,0:19:30.31:0,30,732	0/0:9,0:7:4.26:0,4,20	0/1:24,0:16:48.24:48,0,163	1/1:19,0:13:8.95:67,9,0	1/1:19,0:17:14.24:324,14,0	1/1:30,0:24:20.42:508,20,0	0/1:22,0:17:56.96:57,0,123	0/1:23,0:20:25.53:258,0,26	./.	1/1:23,0:13:5.01:48,5,0	1/1:25,0:22:15.22:143,15,0	0/1:20,0:18:19.34:19,0,618	0/0:35,0:28:23.69:0,24,807	0/0:27,0:24:8.62:0,9,465	0/1:26,0:25:73.67:276,0,74	0/1:22,0:19:4.14:83,0,4	1/1:16,0:11:4.75:47,5,0
chr10	40771056	.	TGA	T	2110.62	PASS	AB=0.933;AC=41;AF=0.854;AN=48;BaseQRankSum=6.152;DP=525;FS=20.586;HRun=0;HaplotypeScore=95.3313;InbreedingCoeff=-0.1482;MQ=36.58;MQ0=75;MQRankSum=0.823;QD=4.26;ReadPosRankSum=-0.503;VQSLOD=0.8543;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:31,0:23:14.75:110,15,0	0/1:1,7:8:2.48:12,0,2	./.	./.	./.	1/1:14,0:10:11.78:77,12,0	1/1:30,0:23:12.15:54,12,0	1/1:14,0:11:1.21:88,1,0	1/1:24,0:22:8.60:50,9,0	0/1:22,0:15:28.56:49,0,29	1/1:9,0:7:2.90:16,3,0	0/1:18,0:15:10.08:10,0,154	1/1:8,0:6:5.22:30,5,0	0/1:24,0:16:2.10:74,0,2	1/1:16,0:10:8.95:67,9,0	1/1:16,0:14:14.59:105,15,0	1/1:26,0:20:31.95:236,32,0	1/1:23,0:19:18.28:205,18,0	0/1:19,0:16:29.73:125,0,30	./.	1/1:22,0:11:8.82:72,9,0	1/1:23,0:20:14.72:116,15,0	0/1:23,0:21:36.58:37,0,126	0/1:36,0:29:10.51:11,0,143	1/1:26,0:23:18.85:211,19,0	1/1:26,0:25:9.38:315,9,0	1/1:20,0:17:10.20:114,10,0	1/1:17,0:10:8.37:48,8,0
chr10	40771058	.	AGTGTGTGT	A	1037.28	PASS	AB=0.937;AC=17;AF=0.354;AN=48;BaseQRankSum=2.815;DP=521;FS=5.385;HRun=0;HaplotypeScore=122.3479;InbreedingCoeff=0.2506;MQ=36.33;MQ0=74;MQRankSum=-4.204;QD=4.05;ReadPosRankSum=1.966;VQSLOD=2.0220;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:30,1:24:0.58:5,1,0	0/0:8,0:8:12.82:0,13,95	./.	./.	./.	1/1:15,0:11:2.69:16,3,0	0/1:31,0:24:35.46:41,0,35	0/1:6,0:11:9.35:9,0,25	0/1:25,0:23:6:11,0,6	0/0:21,0:14:15.69:0,16,122	0/0:8,0:6:3.01:0,3,30	0/0:19,0:15:15.52:0,16,370	0/0:7,0:5:2.47:0,2,7	0/0:25,0:17:14.50:0,14,176	./.	1/1:13,2:14:6.90:190,7,0	1/1:23,1:19:22.71:368,23,0	0/0:23,0:19:6.58:0,7,65	0/1:18,0:16:7.92:150,0,8	0/0:11,0:10:0:0,0,0	0/0:23,0:12:0:0,0,1	1/1:16,5:19:7.52:53,8,0	0/0:23,0:21:13.88:0,14,383	0/0:37,0:30:23.44:0,23,464	0/0:26,0:23:11.85:0,12,95	0/1:23,0:23:39.30:166,0,39	0/1:19,0:16:1.77:113,0,2	0/1:15,0:8:5.05:59,0,5
chr10	40771076	.	TGTGTGAGAGAGAGA	T	2067.52	PASS	AB=0.905;AC=29;AF=0.580;AN=50;BaseQRankSum=4.083;DP=506;FS=14.977;HRun=0;HaplotypeScore=123.8389;InbreedingCoeff=0.2712;MQ=34.57;MQ0=71;MQRankSum=-2.757;QD=6.05;ReadPosRankSum=2.263;VQSLOD=1.7417;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:32,0:24:53.30:53,0,59	1/1:8,0:8:1.48:5,1,0	./.	./.	./.	1/1:15,0:11:10.23:155,10,0	0/1:13,18:24:0.60:12,0,1	1/1:11,0:9:10.59:226,11,0	1/1:4,20:23:3.01:96,3,0	0/1:12,0:14:46.98:47,0,571	1/1:4,0:6:1.55:4,2,0	0/0:17,0:13:18.85:0,19,202	0/0:7,0:6:7.67:0,8,264	0/0:29,0:21:19.75:0,20,543	0/0:15,0:9:4.80:0,5,255	0/1:15,0:13:65.65:66,0,135	0/1:24,0:18:74.21:74,0,396	0/1:20,0:16:42.85:43,0,828	1/1:7,5:9:24.03:339,24,0	0/0:12,0:12:0.47:0,0,1	1/1:26,0:17:2.69:93,3,0	0/1:19,0:16:23.34:23,0,84	0/0:23,0:21:15.05:0,15,222	0/0:41,0:34:30.33:0,30,815	1/1:24,0:21:18.03:204,18,0	1/1:17,0:16:27.46:279,27,0	1/1:18,0:15:14.83:196,15,0	1/1:9,7:9:12.04:314,12,0
chr10	40771080	.	TGAGAGAGAGA	T	634.36	PASS	AB=0.989;AC=17;AF=0.370;AN=46;BaseQRankSum=3.994;DP=509;FS=12.703;HRun=0;HaplotypeScore=116.6240;InbreedingCoeff=0.3657;MQ=34.37;MQ0=69;MQRankSum=-1.629;QD=3.06;ReadPosRankSum=1.459;VQSLOD=1.6435;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:25:41.86:42,0,112	0/1:8,0:8:0:0,0,0	./.	./.	./.	1/1:11,3:10:5.52:107,6,0	./.	0/0:11,0:9:0:0,0,1	1/1:25,0:23:3.01:81,3,0	0/0:21,0:14:23.91:0,24,602	./.	0/0:16,0:12:3.07:0,3,11	0/0:8,0:6:6.02:0,6,255	0/0:30,0:22:15.52:0,16,607	0/0:17,0:11:4.29:0,4,236	0/0:17,0:15:8.32:0,8,152	0/0:25,0:19:12.51:0,13,356	0/0:22,0:18:18.78:0,19,1007	1/1:12,0:9:2.98:87,3,0	0/0:12,0:13:0:0,0,0	1/1:22,0:14:2.34:83,2,0	0/1:19,0:16:7.95:8,0,83	0/0:25,0:23:3.48:0,3,32	0/0:41,0:34:17.62:0,18,649	0/1:24,0:21:0:0,0,0	0/1:17,1:17:10.40:75,0,10	1/1:11,7:15:5.82:77,6,0	1/1:13,0:9:9.03:209,9,0
chr10	40772651	.	G	GA	5251.59	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-0.839;DP=580;FS=0.383;HRun=0;HaplotypeScore=82.0192;InbreedingCoeff=0.9948;MQ=79.27;MQ0=0;MQRankSum=-2.220;QD=41.03;ReadPosRankSum=1.538;VQSLOD=5.4299;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,33:35:78.26:1230,78,0	0/0:5,0:5:15.05:0,15,210	0/0:22,0:22:60.18:0,60,808	0/0:18,0:18:50.82:0,51,633	1/1:2,7:9:21.07:335,21,0	0/0:19,0:19:54.18:0,54,754	0/0:30,0:30:90.30:0,90,1257	0/0:21,0:21:60.18:0,60,820	0/0:21,0:21:63.18:0,63,845	0/0:17,0:17:51.17:0,51,710	0/0:9,0:9:27.09:0,27,374	0/0:24,0:24:72.21:0,72,984	0/0:20,0:20:60.18:0,60,821	0/0:19,0:19:57.19:0,57,797	1/1:1,17:18:51.17:810,51,0	1/1:0,16:16:42.14:671,42,0	1/1:1,39:40:99:1726,108,0	0/0:29,0:29:87.25:0,87,1195	0/0:20,0:20:57.19:0,57,795	0/0:15,0:15:42.14:0,42,587	0/0:47,0:47:99:0,138,1927	1/1:0,10:10:30.10:479,30,0	0/0:21,0:21:63.18:0,63,850	0/0:33,0:33:96.32:0,96,1341	0/0:16,0:16:48.14:0,48,652	0/0:25,0:25:72.23:0,72,991	0/0:14,0:14:42.14:0,42,587	0/0:7,0:7:21.07:0,21,291
chr10	40772762	.	TTGTGTGTGTGTGTGTGTG	T	938.12	PASS	AB=0.923;AC=10;AF=0.192;AN=52;BaseQRankSum=3.112;DP=578;FS=7.896;HRun=0;HaplotypeScore=245.8067;InbreedingCoeff=0.2325;MQ=68.32;MQ0=23;MQRankSum=-3.952;QD=5.65;ReadPosRankSum=-0.016;VQSLOD=0.7647;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:33:31.98:0,32,1999	0/0:11,0:11:12.03:0,12,248	./.	./.	0/0:17,0:17:12:0,12,465	0/1:12,0:12:7.08:7,0,123	0/1:21,0:20:16.22:16,0,70	0/0:18,0:16:6.39:0,6,32	0/0:12,0:18:1.95:0,2,54	0/0:24,0:24:27.54:0,28,1239	0/0:19,0:19:24.07:0,24,1120	0/0:17,0:17:18.52:0,19,518	0/0:17,0:15:18.03:0,18,454	0/0:14,0:14:13.50:0,13,297	0/0:16,0:14:15.05:0,15,593	0/0:19,0:19:21.49:0,21,702	0/0:25,0:23:12.47:0,12,528	0/0:32,0:30:37.01:0,37,1958	0/1:21,0:18:2.14:53,0,2	1/1:8,6:13:7.75:45,8,0	0/1:38,0:36:69.60:134,0,70	0/0:16,0:16:18.06:0,18,896	0/0:15,0:15:20.89:0,21,619	0/0:26,0:24:32.79:0,33,990	0/0:21,0:19:24.02:0,24,883	0/1:18,4:22:46.08:52,0,46	0/1:16,12:29:45.49:478,0,45	1/1:6,1:9:9.01:295,9,0
chr10	40775937	.	A	ACT	1596.06	PASS	AB=0.947;AC=44;AF=0.846;AN=52;BaseQRankSum=2.670;DP=590;FS=22.591;HRun=0;HaplotypeScore=123.7004;InbreedingCoeff=0.1160;MQ=63.54;MQ0=13;MQRankSum=-0.890;QD=3.19;ReadPosRankSum=-2.785;VQSLOD=0.0849;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:35,0:35:11.76:107,12,0	0/0:11,0:11:2.99:0,3,25	./.	./.	1/1:16,0:15:5.72:49,6,0	1/1:24,0:24:3:29,3,0	0/1:23,0:23:20.09:20,0,31	1/1:36,0:34:10.22:75,10,0	1/1:19,0:19:6.01:57,6,0	1/1:20,0:18:5.81:51,6,0	1/1:18,0:18:6.01:56,6,0	1/1:14,0:14:6.01:68,6,0	1/1:16,0:16:6:51,6,0	1/1:26,0:26:2.98:22,3,0	1/1:14,0:14:9.01:84,9,0	1/1:18,0:18:6:54,6,0	1/1:27,0:27:17.98:158,18,0	0/1:20,0:20:19.82:20,0,45	1/1:14,0:14:14.74:128,15,0	1/1:21,0:21:3.45:23,3,0	1/1:20,0:19:6.01:59,6,0	0/0:18,0:18:9:0,9,88	0/1:11,1:15:26.26:38,0,26	1/1:29,0:29:13.19:100,13,0	0/1:18,0:18:14.53:15,0,27	1/1:29,0:29:24.52:251,25,0	1/1:14,0:13:6.01:65,6,0	1/1:15,0:13:18.86:152,19,0
chr10	40775982	.	C	CTT	7314.32	PASS	AB=0.843;AC=47;AF=0.839;AN=56;BaseQRankSum=-0.960;DP=545;FS=2.178;HRun=2;HaplotypeScore=92.8978;InbreedingCoeff=0.6587;MQ=63.80;MQ0=6;MQRankSum=-3.659;QD=15.43;ReadPosRankSum=-2.709;VQSLOD=1.2835;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:38,0:38:80.70:704,81,0	1/1:8,0:7:13.71:96,14,0	0/0:22,0:8:7.08:0,7,100	0/0:29,0:11:16.02:0,16,118	1/1:21,0:21:48.23:433,48,0	1/1:0,19:22:3.01:56,3,0	1/1:7,10:18:6.02:111,6,0	1/1:27,0:27:76.29:633,76,0	1/1:1,12:14:11.88:146,12,0	1/1:23,0:23:65.96:650,66,0	1/1:1,18:18:35.69:311,36,0	0/1:12,0:12:0.27:0,0,100	1/1:16,0:16:40.81:280,41,0	1/1:19,0:19:44.29:313,44,0	1/1:2,18:21:9.03:149,9,0	1/1:0,0:12:6.02:78,6,0	1/1:15,1:16:34.59:310,35,0	0/1:2,17:19:0.12:51,0,0	1/1:20,0:20:49.71:411,50,0	1/1:17,2:19:48.44:396,48,0	1/1:11,1:12:27:265,27,0	1/1:25,0:25:48.07:431,48,0	0/0:20,0:20:31.65:0,32,395	0/1:24,0:24:2.82:3,0,169	1/1:19,0:19:53.88:493,54,0	1/1:21,1:22:53.46:509,53,0	1/1:16,0:16:44.62:346,45,0	1/1:12,0:11:20.09:138,20,0
chr10	40776490	.	CAA	C	1337.81	PASS	AB=0.538;AC=23;AF=0.411;AN=56;BaseQRankSum=7.403;DP=301;FS=4.721;HRun=13;HaplotypeScore=52.2551;InbreedingCoeff=0.8198;MQ=76.81;MQ0=1;MQRankSum=-7.054;QD=11.84;ReadPosRankSum=0.492;VQSLOD=1.8511;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,10:13:9.41:234,9,0	1/1:0,0:3:5.49:24,5,0	0/0:14,0:12:3.05:0,3,94	0/0:13,0:8:10.10:0,10,100	1/1:6,7:12:23.99:230,24,0	0/0:10,0:11:33.11:0,33,463	0/0:4,0:4:9.03:0,9,130	0/0:24,0:26:55.64:0,56,696	0/0:9,0:9:21.06:0,21,285	1/1:4,0:10:16.44:71,16,0	1/1:4,0:9:8.18:36,8,0	0/0:10,0:10:26.87:0,27,342	0/1:1,1:7:16.11:16,0,21	0/0:2,0:5:7.49:0,7,26	1/1:1,5:6:15.02:145,15,0	1/1:1,5:6:18.03:175,18,0	1/1:4,8:12:30.03:291,30,0	1/1:2,1:14:30.37:146,30,0	0/0:13,0:16:34.06:0,34,366	0/0:11,0:12:21.07:0,21,289	0/0:9,0:9:24.07:0,24,329	1/1:6,2:8:8.96:87,9,0	0/0:5,0:5:9.02:0,9,113	0/0:8,0:9:23.57:0,24,313	1/1:4,0:12:21.92:95,22,0	0/0:16,0:16:30.08:0,30,399	0/0:12,0:13:20.56:0,21,269	0/0:9,0:11:32.58:0,33,408
chr10	40776522	.	GA	G	1613.97	PASS	AB=0.753;AC=28;AF=0.500;AN=56;BaseQRankSum=9.164;DP=345;FS=28.248;HRun=10;HaplotypeScore=59.5105;InbreedingCoeff=0.8054;MQ=80.88;MQ0=3;MQRankSum=-4.270;QD=9.78;ReadPosRankSum=4.238;VQSLOD=0.5526;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,9:12:29.93:252,30,0	1/1:2,0:3:3.85:11,4,0	0/1:21,1:16:13.41:13,0,238	0/0:23,0:15:5.43:0,5,65	1/1:4,6:10:14.99:130,15,0	0/1:2,9:11:9.18:158,0,9	1/1:1,5:6:15:130,15,0	0/0:32,0:31:80.80:0,81,866	1/1:1,10:11:17.99:156,18,0	1/1:2,0:16:26.47:77,26,0	1/1:0,0:11:16.07:46,16,0	0/0:8,0:8:18.05:0,18,199	0/0:10,0:10:27.07:0,27,299	0/0:4,0:4:9.02:0,9,99	1/1:0,11:11:26.99:234,27,0	1/1:1,7:8:17.97:156,18,0	1/1:2,10:12:29.97:255,30,0	1/1:5,0:16:14.25:42,14,0	0/0:22,1:23:25.08:0,25,505	0/0:15,0:15:36.10:0,36,395	0/0:10,0:10:30.07:0,30,325	1/1:1,6:7:15:129,15,0	0/0:9,0:9:24.05:0,24,257	0/0:11,0:11:21.04:0,21,224	1/1:0,0:9:14.26:42,14,0	0/0:14,0:14:33.08:0,33,357	0/0:13,0:13:39.08:0,39,415	0/0:8,0:8:23.93:0,24,247
chr10	40776915	.	CTGTGTG	C	555.17	PASS	AB=0.870;AC=17;AF=0.327;AN=52;BaseQRankSum=1.169;DP=630;FS=1.090;HRun=0;HaplotypeScore=136.5041;InbreedingCoeff=0.5549;MQ=61.61;MQ0=14;MQRankSum=-0.597;QD=3.39;ReadPosRankSum=3.011;VQSLOD=2.5989;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:36,2:37:5.97:46,6,0	1/1:3,1:4:3.01:59,3,0	./.	0/0:34,0:20:0:0,0,0	./.	0/0:13,0:19:15.03:0,15,321	0/0:28,0:28:17.29:0,17,367	0/0:39,0:37:17.94:0,18,247	0/0:21,0:21:27.07:0,27,586	0/0:18,0:17:3.01:0,3,43	1/1:9,0:9:2.73:60,3,0	0/1:17,1:20:34.17:34,0,284	0/0:15,0:14:3.48:0,3,79	0/0:17,0:26:8.87:0,9,199	1/1:10,3:13:9.03:181,9,0	1/1:8,7:16:6.02:102,6,0	1/1:22,10:32:8.34:160,8,0	0/0:20,0:21:3:0,3,25	0/0:23,0:22:9.03:0,9,238	0/0:26,0:26:15.05:0,15,390	0/0:43,0:42:42.14:0,42,1041	1/1:21,2:24:6:67,6,0	0/0:15,3:18:5.99:0,6,50	0/0:20,0:28:0.37:0,0,42	1/1:7,0:7:0.47:1,0,0	0/0:36,0:36:48.13:0,48,1085	0/0:21,0:21:21.07:0,21,560	0/0:15,0:15:27.09:0,27,654
chr10	40777728	.	CA	C	1319.04	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.588;DP=653;FS=12.576;HRun=2;HaplotypeScore=75.1222;InbreedingCoeff=0.9913;MQ=85.79;MQ0=0;MQRankSum=-4.229;QD=31.41;ReadPosRankSum=-0.039;VQSLOD=2.1114;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,123,1843	0/0:12,0:12:36.09:0,36,516	0/0:20,0:20:60.19:0,60,840	0/0:25,0:25:69.16:0,69,970	0/0:24,0:24:72.23:0,72,1056	0/0:9,0:9:27.09:0,27,404	0/0:24,0:24:72.24:0,72,1078	0/0:23,0:23:66.22:0,66,972	0/0:25,0:25:75.25:0,75,1120	0/0:22,0:22:66.21:0,66,966	0/0:14,0:14:42.14:0,42,629	0/0:22,0:22:60.20:0,60,897	1/1:0,21:21:60.20:779,60,0	1/1:0,21:21:51.16:662,51,0	0/0:32,0:32:96.31:0,96,1418	0/0:21,0:21:60.20:0,60,899	0/0:44,0:44:99:0,132,1933	0/0:25,0:25:75.18:0,75,1075	0/0:17,0:17:45.14:0,45,655	0/0:23,0:23:69.23:0,69,1034	0/0:46,0:46:99:0,132,1948	0/0:22,0:22:63.21:0,63,944	0/0:20,0:20:60.20:0,60,898	0/0:28,0:28:84.20:0,84,1207	0/0:17,0:17:48.16:0,48,719	0/0:16,0:16:45.14:0,45,655	0/0:33,0:33:96.33:0,96,1436	0/0:5,0:5:15.05:0,15,222
chr10	40778911	.	TG	T	1453.57	PASS	AB=0.855;AC=21;AF=0.375;AN=56;BaseQRankSum=0.263;DP=521;FS=3.101;HRun=11;HaplotypeScore=87.8239;InbreedingCoeff=0.1397;MQ=78.75;MQ0=0;MQRankSum=-1.535;QD=5.01;ReadPosRankSum=3.496;VQSLOD=1.8109;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:29,5:34:16.41:16,0,238	0/1:4,6:11:17.94:66,0,18	0/1:17,2:19:29.99:30,0,139	0/1:17,0:17:49.39:49,0,53	0/0:18,0:19:14.83:0,15,121	0/0:18,1:26:23:0,23,354	0/0:13,0:25:32.32:0,32,248	0/1:18,1:19:12.22:12,0,57	0/0:13,0:23:26.51:0,27,194	1/1:5,7:12:22.77:175,23,0	1/1:6,9:15:29.96:244,30,0	0/1:16,5:23:99:142,0,109	0/1:14,4:18:49.32:49,0,123	0/1:10,3:13:27.76:28,0,132	0/0:6,0:10:8.86:0,9,78	0/0:12,0:17:14.69:0,15,117	0/0:23,0:29:38.55:0,39,334	1/1:4,12:16:29.94:246,30,0	0/0:6,0:10:11.50:0,11,64	0/0:16,0:16:14.78:0,15,103	0/0:21,0:31:8.83:0,9,63	0/1:13,4:17:40.64:41,0,216	1/1:5,11:16:23.92:197,24,0	0/1:22,1:23:8.92:9,0,300	1/1:2,14:17:40.99:326,41,0	0/1:11,1:18:9.65:10,0,59	0/0:13,0:19:5.87:0,6,40	0/0:6,0:6:11.81:0,12,82
chr10	40779374	.	AGT	A	3778.07	PASS	AB=0.880;AC=22;AF=0.407;AN=54;BaseQRankSum=1.598;DP=875;FS=4.493;HRun=0;HaplotypeScore=141.1925;InbreedingCoeff=0.4866;MQ=57.84;MQ0=11;MQRankSum=-1.121;QD=8.61;ReadPosRankSum=1.941;VQSLOD=3.4834;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:26,30:58:73.36:945,73,0	1/1:7,6:12:18.05:204,18,0	./.	0/0:38,0:12:0:0,0,0	0/0:20,0:22:33.65:0,34,336	0/0:14,1:15:2.18:0,2,471	0/1:33,4:37:44.64:45,0,646	0/0:38,0:38:16.60:0,17,305	0/1:29,4:33:16.68:17,0,632	0/1:25,13:36:57.16:329,0,57	1/1:8,2:10:3.01:34,3,0	0/1:24,5:30:56.36:56,0,611	1/1:12,13:28:4.71:437,5,0	1/1:13,17:35:50.13:491,50,0	0/1:33,2:46:0.54:1,0,546	0/0:9,0:21:41.77:0,42,413	0/0:16,1:26:23.01:0,23,483	1/1:15,20:35:39.97:438,40,0	0/0:10,0:19:16.04:0,16,243	0/0:13,1:34:16.77:0,17,389	0/0:40,2:88:12.87:0,13,670	1/1:10,12:24:44.15:405,44,0	0/0:22,0:22:39.07:0,39,538	0/0:45,1:48:13.47:0,13,1052	1/1:7,14:25:41.28:375,41,0	0/0:17,0:24:37.67:0,38,377	0/1:11,1:23:3.91:4,0,224	0/0:10,0:16:23.81:0,24,255
chr10	40779518	.	GTGCATT	G	2711.77	PASS	AB=0.995;AC=18;AF=0.321;AN=56;BaseQRankSum=12.498;DP=907;FS=5.162;HRun=0;HaplotypeScore=250.2093;InbreedingCoeff=0.2787;MQ=54.67;MQ0=11;MQRankSum=-3.920;QD=7.55;ReadPosRankSum=0.008;VQSLOD=1.4943;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:38,0:38:0.91:1,0,26	0/1:16,0:16:36.32:36,0,84	0/0:42,0:19:7.78:0,8,782	0/0:42,0:25:60.21:0,60,1636	1/1:31,3:34:31.11:282,31,0	0/0:25,0:25:75.26:0,75,2466	0/0:42,0:42:99:0,114,3294	0/0:32,0:32:42.53:0,43,2478	0/0:48,0:48:99:0,138,4358	0/1:20,0:19:99:211,0,102	1/1:15,0:15:0.14:57,0,0	0/0:36,0:36:99:0,99,3160	0/1:24,0:24:99:182,0,230	0/1:32,0:32:99:207,0,320	1/1:34,3:36:61.60:537,62,0	0/1:24,1:25:64.02:293,0,64	1/1:34,2:36:64.39:567,64,0	0/1:19,0:19:17.45:341,0,17	0/0:17,0:16:48.16:0,48,1568	0/0:29,0:29:87.30:0,87,2863	0/0:86,0:86:99:0,240,6897	1/1:37,0:37:0.54:7,1,0	0/0:28,0:28:84.29:0,84,2601	0/0:51,0:51:99:0,147,4686	0/1:26,0:25:8.28:163,0,8	0/0:34,0:34:99:0,99,3058	0/0:19,0:19:57.20:0,57,1798	0/0:17,0:17:48.16:0,48,1327
chr10	40779520	.	GCATT	G	7059.58	PASS	AB=0.822;AC=21;AF=0.375;AN=56;BaseQRankSum=14.467;DP=901;FS=3.277;HRun=0;HaplotypeScore=206.8277;InbreedingCoeff=0.6672;MQ=54.78;MQ0=10;MQRankSum=-3.127;QD=19.50;ReadPosRankSum=2.705;VQSLOD=4.3148;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,4:38:48.47:434,48,0	0/1:15,1:16:5.52:147,0,6	0/0:38,0:18:17.33:0,17,823	0/0:37,0:25:63.21:0,63,1520	1/1:3,30:34:35.07:678,35,0	0/0:27,0:27:81.28:0,81,2217	0/0:39,0:40:99:0,114,2932	0/0:33,0:33:32.63:0,33,2285	0/0:47,0:47:99:0,138,3722	1/1:18,1:18:30.06:370,30,0	0/1:13,1:15:0.03:57,0,0	0/0:36,0:37:99:0,105,2692	0/1:23,1:25:13.21:386,0,13	0/1:26,1:32:44.93:436,0,45	1/1:3,36:38:63.21:1253,63,0	0/1:2,24:26:41.54:797,0,42	1/1:2,33:36:69.23:1333,69,0	1/1:15,4:19:35.71:509,36,0	0/0:18,0:17:51.18:0,51,1423	0/0:29,0:29:87.30:0,87,2410	0/0:83,0:83:99:0,240,6022	1/1:0,2:37:33.66:324,34,0	0/0:28,0:28:84.29:0,84,2247	0/0:51,0:51:99:0,148,3934	1/1:23,3:25:7.22:335,7,0	0/0:33,0:33:99:0,99,2650	0/0:19,0:19:57.20:0,57,1545	0/0:17,0:17:47.87:0,48,1257
chr10	40780541	.	C	CAA	12606.92	PASS	AB=0.941;AC=27;AF=0.482;AN=56;BaseQRankSum=8.887;DP=578;FS=0.310;HRun=1;HaplotypeScore=112.5495;InbreedingCoeff=0.9203;MQ=86.68;MQ0=2;MQRankSum=-13.427;QD=48.12;ReadPosRankSum=0.297;VQSLOD=4.6958;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,27:30:81.18:1519,81,0	1/1:1,8:9:24.08:485,24,0	0/0:22,0:22:65.95:0,66,923	0/0:25,0:25:70.96:0,71,931	1/1:2,12:15:32.96:562,33,0	0/0:15,0:15:45.14:0,45,707	0/0:32,0:32:96.31:0,96,1537	0/0:35,0:35:99:0,99,1399	0/0:22,0:22:63.18:0,63,973	1/1:4,17:21:63.15:1143,63,0	1/1:1,9:10:26.91:425,27,0	0/0:20,0:20:59.95:0,60,902	1/1:2,13:15:42.14:843,42,0	1/1:5,21:26:78.17:1451,78,0	1/1:1,17:18:54.18:1048,54,0	1/1:6,13:19:8.34:889,8,0	1/1:4,19:22:60.13:1095,60,0	1/1:6,15:21:60.12:1132,60,0	0/0:14,0:14:36.07:0,36,547	0/0:18,0:18:51.15:0,51,781	0/0:45,0:45:99:0,132,2002	1/1:0,15:15:42.07:768,42,0	0/0:17,0:17:48.14:0,48,722	0/1:15,1:16:15.43:15,0,612	1/1:3,21:21:63.17:1229,63,0	0/0:26,0:26:47.22:0,47,1054	0/0:18,0:18:54.18:0,54,875	0/0:7,0:7:21.07:0,21,341
chr10	40780570	.	GC	G	7311.87	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=19.040;DP=627;FS=13.331;HRun=5;HaplotypeScore=133.0480;InbreedingCoeff=0.9785;MQ=88.93;MQ0=0;MQRankSum=-11.731;QD=28.67;ReadPosRankSum=0.228;VQSLOD=2.9765;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,32:33:81.18:902,81,0	1/1:2,10:12:30.09:339,30,0	0/0:23,0:23:53.63:0,54,761	0/0:29,0:30:66.19:0,66,784	1/1:2,16:18:41.88:411,42,0	0/0:15,0:15:42.14:0,42,574	0/0:37,0:37:99:0,111,1487	0/0:25,0:25:60.18:0,60,778	0/0:26,0:26:75.24:0,75,1009	1/1:0,27:27:78.21:874,78,0	1/1:1,12:13:32.82:298,33,0	0/0:23,0:23:63.18:0,63,820	1/1:0,22:22:63.18:714,63,0	1/1:3,14:17:42.12:475,42,0	1/1:0,17:17:51.15:578,51,0	1/1:1,16:17:4.09:435,4,0	1/1:1,22:23:63.18:714,63,0	1/1:1,17:18:45.13:510,45,0	0/0:22,0:22:45.14:0,45,589	0/0:16,0:16:48.14:0,48,634	0/0:59,0:59:99:0,159,2143	1/1:0,16:16:41.72:392,42,0	0/0:11,0:11:27.09:0,27,369	0/0:28,1:29:84.28:0,84,1149	1/1:4,18:22:60.15:668,60,0	0/0:28,1:29:53.23:0,53,1085	0/0:21,0:21:63.21:0,63,860	0/0:6,0:6:18.05:0,18,231
chr10	40781129	.	GT	G	3512.77	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=8.581;DP=724;FS=0.000;HRun=1;HaplotypeScore=76.4817;InbreedingCoeff=0.9997;MQ=96.97;MQ0=0;MQRankSum=-5.139;QD=36.98;ReadPosRankSum=2.909;VQSLOD=4.0643;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,144,2206	0/0:16,0:16:48.16:0,48,765	0/0:31,0:31:87.22:0,87,1263	0/0:45,0:44:88.25:0,88,1416	1/1:1,28:29:58.23:1038,58,0	0/0:19,0:19:57.19:0,57,908	0/0:21,0:21:63.21:0,63,999	0/0:32,0:32:96.30:0,96,1463	0/0:29,0:29:87.28:0,87,1352	0/0:30,0:30:84.28:0,84,1322	0/0:16,0:16:48.16:0,48,765	0/0:20,0:20:60.19:0,60,934	0/0:17,0:17:51.16:0,51,785	0/0:20,0:20:60.20:0,60,954	1/1:0,23:23:63.21:881,63,0	1/1:0,10:10:27.09:378,27,0	1/1:0,33:33:86.90:1216,87,0	0/0:26,0:26:78.15:0,78,1159	0/0:30,0:30:87.27:0,87,1363	0/0:29,0:29:84.26:0,84,1292	0/0:33,0:33:99:0,99,1551	0/0:15,0:15:42.14:0,42,651	0/0:22,0:22:60.20:0,60,946	0/0:26,0:26:78.25:0,78,1207	0/0:23,0:23:69.22:0,69,1078	0/0:24,0:24:72.23:0,72,1126	0/0:32,0:32:96.33:0,96,1531	0/0:20,0:20:60.20:0,60,955
chr10	40783235	.	AT	A	4026.59	PASS	AB=0.964;AC=14;AF=0.250;AN=56;BaseQRankSum=6.245;DP=580;FS=5.005;HRun=7;HaplotypeScore=62.7624;InbreedingCoeff=0.8170;MQ=63.94;MQ0=0;MQRankSum=1.311;QD=23.41;ReadPosRankSum=3.150;VQSLOD=4.0983;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,29:30:78.13:784,78,0	0/0:11,0:11:31.77:0,32,171	0/1:12,1:7:13.43:13,0,74	0/1:8,0:6:11.40:11,0,58	1/1:2,34:36:99:1026,102,0	0/0:30,0:30:84.26:0,84,1043	0/0:15,0:15:45.13:0,45,551	0/0:30,0:30:69.18:0,69,820	0/0:23,0:23:60.17:0,60,729	0/0:29,0:29:49.73:0,50,333	0/0:18,0:18:48.74:0,49,248	0/0:13,0:13:36.12:0,36,453	0/0:19,0:19:57.10:0,57,676	0/0:18,0:18:54.16:0,54,664	1/1:0,22:22:60.14:612,60,0	1/1:1,19:20:51.12:520,51,0	1/1:3,20:23:51.11:520,51,0	0/0:16,0:16:40.70:0,41,209	0/0:28,0:27:63.19:0,63,780	0/0:21,0:21:63.20:0,63,792	0/0:10,0:10:21.07:0,21,262	1/1:0,20:20:54.08:540,54,0	0/0:27,0:27:75.21:0,75,916	0/0:6,0:6:18.06:0,18,226	0/0:24,0:24:62.80:0,63,315	0/0:28,0:28:78.23:0,78,950	0/0:26,0:26:72.22:0,72,894	0/0:16,0:16:48.14:0,48,591
chr10	40783478	.	C	CCTT	17300.77	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-13.855;DP=659;FS=4.866;HRun=0;HaplotypeScore=88.9547;InbreedingCoeff=0.9962;MQ=86.24;MQ0=0;MQRankSum=-7.414;QD=61.79;ReadPosRankSum=2.755;VQSLOD=6.9130;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,17:20:48.16:1090,48,0	1/1:2,12:14:42.10:918,42,0	0/0:28,0:28:71.93:0,72,946	0/0:17,0:17:21.52:0,22,449	1/1:0,20:21:63.08:1397,63,0	0/0:31,0:31:90.29:0,90,1505	0/0:17,0:17:51.15:0,51,818	0/0:34,0:34:93.30:0,93,1535	0/0:29,0:29:87.28:0,87,1435	1/1:5,32:37:99:2447,108,0	1/1:0,17:17:51.13:1089,51,0	0/0:24,0:24:66.21:0,66,1098	1/1:3,16:20:54.19:1227,54,0	1/1:1,17:19:51.18:1159,51,0	1/1:2,26:29:78.27:1766,78,0	1/1:2,20:22:60.21:1382,60,0	1/1:0,18:18:48.16:1104,48,0	1/1:2,15:18:44.97:1037,45,0	0/0:23,0:23:66.21:0,66,1096	0/0:30,0:30:81.28:0,81,1380	0/0:18,0:18:48.16:0,48,818	1/1:2,23:25:69.08:1441,69,0	0/0:26,0:26:78.27:0,78,1324	0/0:21,0:21:63.17:0,63,992	1/1:1,19:19:54.19:1245,54,0	0/0:29,1:30:18.08:0,18,1362	0/0:46,0:46:99:0,129,2117	0/0:5,0:5:15.05:0,15,256
chr10	40784271	.	T	TAC	1155.44	PASS	AB=0.941;AC=17;AF=0.315;AN=54;BaseQRankSum=6.045;DP=690;FS=2.015;HRun=0;HaplotypeScore=123.9168;InbreedingCoeff=0.4673;MQ=51.40;MQ0=21;MQRankSum=-4.383;QD=4.55;ReadPosRankSum=-1.815;VQSLOD=2.5321;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:45,3:47:21.18:21,0,37	1/1:6,0:5:1.77:4,2,0	./.	0/1:38,0:11:0.50:1,0,62	1/1:17,4:21:20.83:317,21,0	0/0:21,0:19:43.57:0,44,494	0/0:20,0:20:29.99:0,30,374	0/0:35,0:34:51.35:0,51,621	0/0:15,0:15:31.40:0,31,341	1/1:28,0:28:37.31:280,37,0	1/1:8,0:9:0.45:2,0,0	0/0:21,0:21:33.06:0,33,355	0/0:22,0:22:28.69:0,29,282	0/0:25,0:24:25.10:0,25,252	0/0:23,0:23:2.68:0,3,11	0/1:21,0:21:26.34:57,0,26	0/1:20,2:21:6.39:254,0,6	1/1:10,0:10:5.93:29,6,0	0/0:23,0:19:28.40:0,28,288	0/0:16,0:16:26.88:0,27,253	0/0:39,0:39:62.82:0,63,693	0/1:18,4:21:8.33:337,0,8	0/0:14,0:14:15.03:0,15,170	0/0:60,0:60:99:0,108,1113	1/1:28,0:27:2.91:11,3,0	0/0:29,0:29:41.54:0,42,492	0/0:16,0:16:27.02:0,27,262	0/0:7,0:7:20.27:0,20,211
chr10	40784291	.	C	CACACACAA	2075.38	PASS	AB=1.000;AC=14;AF=0.250;AN=56;BaseQRankSum=6.487;DP=652;FS=14.423;HRun=0;HaplotypeScore=173.2091;InbreedingCoeff=0.5635;MQ=52.12;MQ0=23;MQRankSum=-9.143;QD=11.04;ReadPosRankSum=-4.703;VQSLOD=-0.5321;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:33:1.97:2,0,112	1/1:4,0:3:7.26:76,7,0	0/0:44,0:5:11.59:0,12,83	0/1:40,0:8:1.01:1,0,111	0/0:19,0:18:7.68:0,8,119	0/0:24,0:22:53.91:0,54,1115	0/0:23,0:23:49.51:0,50,963	0/0:34,0:33:55.62:0,56,1422	0/0:17,0:17:42.13:0,42,858	1/1:10,19:31:70.17:1587,70,0	1/1:5,3:11:10.93:230,11,0	0/0:15,0:15:33.11:0,33,842	0/1:15,0:15:27.50:28,0,577	0/0:23,0:22:3.53:0,4,535	0/0:22,0:22:1.61:0,2,4	0/1:18,0:18:26.30:26,0,76	0/0:19,0:17:16.10:0,16,255	1/1:6,0:6:6.02:137,6,0	0/0:25,0:24:58.48:0,58,890	0/0:17,0:17:29.61:0,30,648	0/0:41,0:41:62.02:0,62,1630	0/0:23,0:22:10.71:0,11,217	0/0:14,0:14:15.02:0,15,398	0/0:55,0:55:99:0,111,2670	1/1:9,16:28:21.47:154,21,0	0/0:24,0:24:57:0,57,1280	0/0:15,0:15:27.08:0,27,575	0/0:10,0:8:24.05:0,24,505
chr10	40784292	.	AAG	A	1829.06	PASS	AB=0.900;AC=21;AF=0.375;AN=56;BaseQRankSum=-1.284;DP=668;FS=0.576;HRun=0;HaplotypeScore=124.8817;InbreedingCoeff=0.5023;MQ=52.09;MQ0=23;MQRankSum=3.637;QD=6.22;ReadPosRankSum=5.285;VQSLOD=3.0507;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:37:9.59:0,10,59	0/0:4,0:5:3:0,3,26	0/0:43,0:6:12.04:0,12,169	0/0:40,0:9:9:0,9,108	0/0:20,0:21:8.90:0,9,62	0/0:24,0:22:42.12:0,42,584	0/1:22,0:23:8.46:8,0,431	1/1:30,0:31:17.90:184,18,0	0/1:15,2:17:53.64:54,0,271	0/0:23,0:29:58.52:0,59,502	0/1:9,0:9:0:0,0,1	1/1:7,8:15:15:155,15,0	0/0:12,0:18:9:0,9,78	0/0:16,0:25:14.35:0,14,128	0/0:6,0:26:3.22:0,3,13	0/0:4,0:22:11.76:0,12,123	0/0:17,0:21:3.01:0,3,41	0/0:0,0:7:2.95:0,3,26	1/1:16,9:24:28.19:265,28,0	1/1:5,10:17:20.51:183,21,0	1/1:22,16:40:11.72:108,12,0	0/0:19,0:24:14.39:0,14,117	1/1:6,8:14:2.84:34,3,0	1/1:23,29:54:56.83:605,57,0	0/0:19,0:23:7.85:0,8,30	0/1:13,8:23:15.29:220,0,15	1/1:5,8:15:14.71:130,15,0	0/1:9,0:8:11.10:70,0,11
chr10	40785023	.	TACCATGAGTCTGTCTC	T	5168.81	PASS	AB=0.560;AC=9;AF=0.161;AN=56;BaseQRankSum=9.485;DP=557;FS=2.137;HRun=0;HaplotypeScore=252.5549;InbreedingCoeff=0.8551;MQ=86.22;MQ0=0;MQRankSum=-9.763;QD=74.91;ReadPosRankSum=3.281;VQSLOD=4.1204;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,144,9929	0/0:7,0:7:18.06:0,18,1239	0/0:19,0:19:54.18:0,54,3211	0/0:28,0:28:73.16:0,73,3861	1/1:1,14:15:36.12:1670,36,0	0/0:18,0:18:48.16:0,48,3766	0/0:21,0:21:57.20:0,57,3916	0/0:19,0:19:48.16:0,48,2996	0/0:20,0:20:60.21:0,60,4347	0/0:19,0:19:57.19:0,57,4088	0/0:10,0:10:30.10:0,30,1998	0/0:19,0:19:57.20:0,57,4138	0/0:25,0:25:63.22:0,63,4345	1/1:3,7:10:14.72:699,15,0	0/0:21,0:21:63.22:0,63,4591	0/1:3,11:14:99:954,0,212	1/1:13,8:19:27.09:1147,27,0	0/0:20,0:20:60.21:0,60,4504	0/0:14,0:14:36.12:0,36,2015	0/0:10,0:10:30.10:0,30,2276	0/0:64,0:64:99:0,184,13275	1/1:1,8:9:15.05:699,15,0	0/0:18,0:18:48.16:0,48,3394	0/0:24,0:24:66.23:0,66,4755	0/0:17,0:17:45.15:0,45,3101	0/0:22,0:22:57.67:0,58,4175	0/0:13,0:13:36.12:0,36,2734	0/0:8,0:8:21.07:0,21,1382
chr10	40785135	.	T	TGCGCGC	2053.19	PASS	AB=0.879;AC=28;AF=0.538;AN=52;BaseQRankSum=-0.079;DP=514;FS=8.745;HRun=0;HaplotypeScore=143.4529;InbreedingCoeff=0.3438;MQ=70.84;MQ0=0;MQRankSum=-3.055;QD=6.54;ReadPosRankSum=-2.887;VQSLOD=1.0207;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:14,27:48:8.70:300,9,0	1/1:5,0:5:6.02:142,6,0	0/0:11,0:9:3.01:0,3,43	0/0:13,0:13:0.89:0,1,2	0/1:4,0:15:3.22:3,0,61	0/1:8,0:13:5.29:5,0,112	0/0:16,0:25:11.74:0,12,161	1/1:16,0:16:24.43:186,24,0	0/1:8,0:17:14.93:15,0,217	1/1:19,0:19:26.47:364,26,0	0/1:21,0:21:0:0,0,0	0/0:27,0:27:63.20:0,63,1290	0/0:18,0:18:14.85:0,15,293	0/1:10,0:16:1.27:1,0,154	./.	0/1:5,0:8:15.64:16,0,18	0/0:6,0:44:12.34:0,12,78	0/1:26,0:26:38.87:59,0,39	1/1:10,0:10:17.94:272,18,0	./.	1/1:30,0:30:2.97:20,3,0	1/1:6,9:15:6.02:199,6,0	0/0:19,0:19:45.11:0,45,852	0/0:29,0:29:69.17:0,69,1310	0/1:18,0:18:63.03:63,0,64	1/1:21,0:21:32.08:439,32,0	1/1:10,0:10:3.01:65,3,0	1/1:3,0:6:5.95:71,6,0
chr10	40785140	.	G	GCACA	704.42	PASS	AB=1.000;AC=18;AF=0.321;AN=56;BaseQRankSum=7.388;DP=515;FS=7.016;HRun=0;HaplotypeScore=134.1746;InbreedingCoeff=0.0757;MQ=64.67;MQ0=1;MQRankSum=-7.099;QD=2.84;ReadPosRankSum=0.174;VQSLOD=2.1633;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:44,0:44:44.29:44,0,81	1/1:7,0:7:6.01:58,6,0	0/0:10,0:7:5.17:0,5,61	0/0:7,0:8:9.47:0,9,124	0/0:14,0:14:13.97:0,14,156	0/1:12,0:12:29.66:95,0,30	1/1:15,9:24:9.65:93,10,0	0/0:20,0:19:30.38:0,30,218	1/1:11,4:15:19.71:264,20,0	0/1:22,0:22:19.20:19,0,362	0/0:23,0:23:4.16:0,4,136	0/0:24,0:24:72.23:0,72,1334	0/0:19,0:19:15.28:0,15,525	0/0:14,0:14:34.70:0,35,319	0/0:8,0:8:5.05:0,5,71	0/0:8,0:8:20.49:0,20,179	0/0:45,0:45:53.49:0,53,358	0/1:24,0:24:33.80:34,0,39	0/1:10,0:10:21.90:37,0,22	1/1:11,0:11:6.11:18,6,0	0/0:26,0:26:17.72:0,18,223	0/1:14,0:14:36:36,0,118	0/0:19,0:19:54.17:0,54,1010	0/0:29,0:29:84.22:0,84,1553	0/1:23,0:23:33.19:33,0,43	0/1:27,0:27:93.39:93,0,130	0/1:10,0:10:27.55:28,0,39	0/1:5,0:5:24.73:25,0,54
chr10	40785146	.	G	GCGCGCACA	5095.10	PASS	AB=0.819;AC=24;AF=0.462;AN=52;BaseQRankSum=-4.887;DP=540;FS=0.490;HRun=0;HaplotypeScore=156.5998;InbreedingCoeff=0.2195;MQ=54.88;MQ0=1;MQRankSum=-3.308;QD=15.30;ReadPosRankSum=-5.281;VQSLOD=2.2179;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:40,0:40:77.22:133,0,77	1/1:1,6:11:6.91:272,7,0	0/0:8,0:3:2.29:0,2,28	0/0:3,0:3:0.47:0,0,1	0/1:14,0:14:18.26:18,0,83	0/1:10,0:10:18.88:19,0,178	0/0:21,0:21:12.90:0,13,150	1/1:20,0:19:47.55:549,48,0	0/1:16,0:16:67.74:68,0,230	1/1:5,10:21:47.31:1030,47,0	0/1:3,16:23:0:0,0,0	0/0:24,0:25:69.20:0,69,1515	0/0:19,0:19:24.85:0,25,326	0/0:13,0:14:28.08:0,28,237	./.	0/1:9,0:9:8.24:8,0,81	0/0:47,0:47:65.53:0,66,617	0/1:8,0:32:6.88:297,0,7	1/1:3,5:12:29.40:626,29,0	./.	0/1:6,16:27:18.68:38,0,19	0/1:15,0:15:67.44:103,0,67	0/0:19,0:20:53.83:0,54,1134	0/0:28,0:28:81.26:0,81,1739	0/1:2,17:26:8.15:128,0,8	1/1:3,27:34:75.86:1409,76,0	1/1:1,9:12:3.19:133,3,0	1/1:11,0:11:17.28:265,17,0
chr10	40785148	.	A	ACG	1508.56	PASS	AB=1.000;AC=31;AF=0.554;AN=56;BaseQRankSum=8.002;DP=518;FS=4.593;HRun=0;HaplotypeScore=127.2437;InbreedingCoeff=0.1012;MQ=54.59;MQ0=4;MQRankSum=-2.153;QD=3.90;ReadPosRankSum=1.427;VQSLOD=2.4894;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:37,0:37:10.81:85,11,0	1/1:11,0:11:9.14:52,9,0	0/0:8,0:3:5.57:0,6,37	0/0:5,0:4:0.47:0,0,1	0/1:14,0:14:1.26:1,0,79	0/1:11,0:11:1.68:2,0,92	0/0:21,0:21:15.11:0,15,80	0/1:21,0:20:63.79:95,0,64	0/1:16,0:16:16.75:17,0,103	1/1:22,0:21:13.16:160,13,0	1/1:20,0:20:7.31:29,7,0	0/0:24,0:24:69.07:0,69,841	1/1:4,16:20:35.97:583,36,0	0/1:15,0:15:54.82:55,0,93	1/1:6,0:5:2.68:11,3,0	0/1:8,0:8:9.79:25,0,10	0/1:46,0:46:63.98:64,0,151	0/1:25,0:25:10.44:10,0,55	0/1:10,0:9:24.58:44,0,25	1/1:14,0:14:10.98:48,11,0	0/0:25,0:25:0.01:0,0,24	0/1:12,0:12:34.98:41,0,35	0/0:20,0:20:53.94:0,54,673	0/0:28,0:28:78.05:0,78,992	0/1:23,0:23:17.61:38,0,18	1/1:32,0:32:30.42:265,30,0	1/1:12,0:12:2.39:22,2,0	1/1:12,0:12:3.45:31,3,0
chr10	40785152	.	A	ACG	637.68	PASS	AB=0.970;AC=21;AF=0.375;AN=56;BaseQRankSum=10.099;DP=520;FS=11.801;HRun=0;HaplotypeScore=113.3563;InbreedingCoeff=-0.0940;MQ=53.35;MQ0=6;MQRankSum=-3.132;QD=2.13;ReadPosRankSum=4.191;VQSLOD=1.2474;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:15.80:0,16,174	1/1:11,0:11:7.96:29,8,0	0/0:11,0:5:2.34:0,2,44	0/0:5,0:3:2.90:0,3,16	0/1:15,0:15:1.26:1,0,82	0/1:6,10:16:13.53:99,0,14	1/1:17,0:17:17.73:149,18,0	0/0:23,0:22:28.20:0,28,325	1/1:14,0:14:0.75:149,1,0	0/1:23,0:22:32.62:33,0,135	0/1:19,0:19:14.65:19,0,15	0/0:23,0:23:69.07:0,69,848	0/1:18,0:18:17.26:65,0,17	0/1:15,0:15:48.77:49,0,111	0/1:7,0:6:5.70:6,0,18	0/1:8,0:8:13.19:13,0,15	0/1:45,0:45:55.33:55,0,197	0/0:26,0:26:9.31:0,9,98	0/1:10,0:9:8.78:9,0,97	1/1:14,0:14:10.98:48,11,0	0/0:23,0:23:3.01:0,3,32	0/1:12,0:12:11.75:12,0,77	0/0:21,0:21:53.83:0,54,678	0/0:26,0:26:75.13:0,75,978	0/1:23,0:23:7.70:8,0,46	0/1:32,0:32:54.91:55,0,183	0/0:11,0:11:0.05:0,0,21	0/0:12,0:12:4.37:0,4,39
chr10	40785706	.	TACAC	T	1668.04	PASS	AB=0.667;AC=17;AF=0.327;AN=52;BaseQRankSum=-0.477;DP=631;FS=1.528;HRun=0;HaplotypeScore=131.7589;InbreedingCoeff=0.7314;MQ=51.33;MQ0=28;MQRankSum=0.145;QD=9.07;ReadPosRankSum=1.292;VQSLOD=2.8298;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:40:20.86:0,21,329	0/0:7,0:6:0:0,0,0	./.	0/0:44,0:9:3.48:0,3,40	0/0:23,0:25:29.54:0,30,487	0/0:11,0:20:3.26:0,3,31	0/0:16,0:23:6.16:0,6,114	1/1:25,0:25:2.51:46,3,0	0/0:13,1:22:22.11:0,22,105	0/0:29,0:28:39.59:0,40,718	0/0:18,0:17:12:0,12,146	1/1:9,0:20:12:106,12,0	0/0:11,0:18:10.98:0,11,49	0/0:18,0:18:23.82:0,24,398	0/0:11,0:13:0.47:0,0,2	0/0:20,0:23:26.29:0,26,485	0/0:27,1:29:50.91:0,51,1073	0/0:8,0:10:6.02:0,6,100	1/1:11,6:17:18.06:266,18,0	1/1:11,9:21:17.89:283,18,0	1/1:14,3:17:5.95:94,6,0	0/0:12,0:21:0.89:0,1,2	./.	0/1:10,0:19:0.02:0,0,0	0/0:17,0:23:9:0,9,110	1/1:18,8:26:20.65:310,21,0	1/1:9,8:19:24.02:331,24,0	1/1:9,8:18:27.08:404,27,0
chr10	40786594	.	CAATAATAAT	C	1190.68	PASS	AC=10;AF=0.250;AN=40;BaseQRankSum=0.607;DP=161;FS=1.284;HRun=0;HaplotypeScore=48.8514;InbreedingCoeff=0.5334;MQ=72.02;MQ0=0;MQRankSum=-0.330;QD=25.88;ReadPosRankSum=-0.607;VQSLOD=2.5644;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:12:12.04:0,12,437	./.	./.	0/0:5,0:5:2.68:0,3,11	./.	0/0:3,0:6:3.01:0,3,118	0/0:4,0:4:3.01:0,3,74	1/1:8,7:15:21.07:412,21,0	0/0:4,0:4:9.03:0,9,312	0/0:3,0:3:3.01:0,3,97	0/0:8,0:8:6.02:0,6,185	0/0:3,0:3:6.02:0,6,208	./.	0/0:4,0:4:3.01:0,3,109	0/0:3,0:3:3.01:0,3,95	0/0:3,0:3:9.03:0,9,278	0/0:14,0:14:12.93:0,13,307	0/0:7,0:14:6.02:0,6,217	1/1:5,3:8:9.03:247,9,0	./.	./.	0/0:4,0:4:3.01:0,3,79	./.	./.	0/0:2,0:5:6.02:0,6,213	1/1:3,1:4:3.01:83,3,0	1/1:8,4:12:12.04:332,12,0	1/1:4,3:7:9.03:249,9,0
chr10	40786909	.	CTGTG	C	849.30	PASS	AB=1.000;AC=21;AF=0.457;AN=46;BaseQRankSum=1.981;DP=345;FS=5.758;HRun=0;HaplotypeScore=77.6266;InbreedingCoeff=0.3937;MQ=39.46;MQ0=49;MQRankSum=-3.657;QD=6.34;ReadPosRankSum=1.331;VQSLOD=1.4140;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:11:6.34:0,6,40	1/1:8,0:7:2.60:31,3,0	./.	./.	0/0:14,0:15:2.99:0,3,24	0/0:16,0:15:2.91:0,3,34	0/0:22,0:21:0.94:0,1,2	1/1:7,13:19:35.71:397,36,0	1/1:6,0:17:6.62:44,7,0	1/1:13,0:13:17.43:160,17,0	1/1:6,0:4:5.74:29,6,0	0/0:9,0:8:2.28:0,2,11	1/1:9,0:12:14.57:131,15,0	0/0:11,0:8:0:0,0,0	0/0:26,0:25:7.13:0,7,48	0/1:10,0:9:18.75:19,0,25	0/0:9,0:4:2.19:0,2,5	0/1:9,0:5:0.63:1,0,14	1/1:8,0:7:2.97:34,3,0	0/0:9,0:7:5.92:0,6,40	./.	./.	0/0:12,0:12:8.26:0,8,105	0/0:33,0:26:2.16:0,2,183	1/1:9,0:8:8.77:58,9,0	1/1:2,3:3:7.95:58,8,0	0/1:14,0:10:25.36:32,0,25	./.
chr10	40786911	.	GTGTGTGTGTA	G	1203.47	PASS	AB=1.000;AC=31;AF=0.674;AN=46;BaseQRankSum=-0.454;DP=342;FS=1.246;HRun=0;HaplotypeScore=91.3545;InbreedingCoeff=0.1683;MQ=39.31;MQ0=51;MQRankSum=-0.087;QD=5.08;ReadPosRankSum=2.665;VQSLOD=1.6855;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:11:5.62:35,6,0	1/1:8,0:7:2.61:54,3,0	./.	./.	./.	0/0:17,0:16:3.01:0,3,72	0/0:22,0:21:7.30:0,7,26	1/1:17,0:16:32.30:197,32,0	1/1:20,0:17:8.91:121,9,0	1/1:12,0:12:12.14:100,12,0	1/1:6,0:4:5.89:38,6,0	0/1:9,0:8:28.59:29,0,105	1/1:12,0:12:16.59:233,17,0	0/0:4,7:8:0.47:0,0,1	0/1:25,0:23:18.09:19,0,18	1/1:5,5:9:3.01:91,3,0	0/1:10,0:5:8.36:34,0,8	1/1:9,0:5:5.95:42,6,0	1/1:8,0:7:2.98:22,3,0	0/0:9,0:7:2.22:0,2,7	./.	./.	0/1:12,0:12:75.86:76,0,264	0/1:32,0:25:36.96:37,0,464	1/1:8,1:8:8.97:70,9,0	1/1:5,0:3:5.89:40,6,0	1/1:14,0:10:17.19:104,17,0	0/0:6,0:4:6.02:0,6,130
chr10	40786913	.	GTGTGTGTA	G	1200.84	PASS	AB=0.992;AC=31;AF=0.674;AN=46;BaseQRankSum=0.334;DP=342;FS=2.912;HRun=0;HaplotypeScore=86.4875;InbreedingCoeff=0.1524;MQ=38.91;MQ0=54;MQRankSum=0.487;QD=5.09;ReadPosRankSum=2.382;VQSLOD=1.4852;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:11:6.42:36,6,0	1/1:1,7:7:2.74:70,3,0	./.	./.	./.	0/0:18,0:17:3.01:0,3,55	0/0:23,0:22:2.93:0,3,15	1/1:16,0:15:32.30:197,32,0	1/1:21,0:17:8.91:104,9,0	1/1:12,0:11:21.09:127,21,0	1/1:6,0:4:5.89:38,6,0	0/1:9,0:8:40.87:41,0,66	1/1:12,0:12:16.50:204,16,0	0/0:11,0:8:0.47:0,0,1	0/1:23,1:22:17.59:19,0,18	1/1:11,0:9:3.01:76,3,0	0/1:10,0:5:7.33:34,0,7	1/1:9,0:5:5.95:42,6,0	1/1:7,0:6:2.98:22,3,0	0/0:8,0:7:2.22:0,2,7	./.	./.	0/1:12,0:12:75.86:76,0,216	0/1:33,0:25:34.93:35,0,385	1/1:9,0:8:8.97:70,9,0	1/1:5,0:3:5.89:40,6,0	1/1:13,0:10:17.19:104,17,0	0/0:6,0:4:6:0,6,86
chr10	40786921	.	ATGTGTG	A	121.76	PASS	AB=1.000;AC=11;AF=0.306;AN=36;BaseQRankSum=2.139;DP=343;FS=0.000;HRun=0;HaplotypeScore=84.5230;InbreedingCoeff=0.3635;MQ=36.62;MQ0=62;MQRankSum=-1.387;QD=1.79;ReadPosRankSum=1.214;VQSLOD=1.2982;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,1:13:0.47:0,0,1	1/1:9,0:8:2.45:44,2,0	./.	./.	0/0:15,0:14:2.99:0,3,23	0/0:19,0:18:3.01:0,3,53	0/0:22,0:21:2.97:0,3,7	./.	1/1:21,0:17:3.01:38,3,0	0/1:11,0:9:3.70:4,0,65	1/1:6,0:4:0.89:2,1,0	0/0:11,0:10:3.01:0,3,70	1/1:8,0:11:5.35:93,5,0	0/0:11,0:8:0.47:0,0,1	0/0:21,1:20:0.75:0,1,1	1/1:10,0:8:3.01:44,3,0	0/0:12,0:7:5.56:0,6,24	./.	./.	./.	./.	./.	0/0:13,0:13:6.02:0,6,168	0/0:36,0:27:16.85:0,17,306	./.	./.	0/0:8,0:9:0.47:0,0,1	0/0:6,0:4:6:0,6,87
chr10	40786960	.	TGAGAGAGAGAGAGA	T	39.90	PASS	AB=1.000;AC=3;AF=0.063;AN=48;BaseQRankSum=2.153;DP=366;FS=3.372;HRun=0;HaplotypeScore=93.8480;InbreedingCoeff=0.3878;MQ=34.50;MQ0=47;MQRankSum=-1.834;QD=2.10;ReadPosRankSum=-0.216;VQSLOD=1.8604;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:15:9.03:0,9,339	0/0:6,0:6:6.49:0,6,231	./.	./.	0/0:11,0:10:9.03:0,9,499	0/0:22,0:21:2.99:0,3,18	0/0:17,0:17:3.90:0,4,8	0/0:11,0:11:24.08:0,24,1089	./.	0/0:17,0:13:36.12:0,36,1667	0/0:7,0:5:6.02:0,6,359	0/0:12,0:11:18.06:0,18,685	1/1:8,4:11:3.01:116,3,0	0/0:6,0:6:6.02:0,6,311	0/0:24,0:23:13.78:0,14,753	0/0:9,0:8:0:0,0,0	0/0:15,0:11:25.90:0,26,864	0/0:12,0:6:9.03:0,9,454	0/0:10,0:10:29.59:0,30,1238	0/1:7,0:5:0:0,0,0	./.	0/0:16,0:13:6.49:0,6,251	0/0:13,0:13:6.49:0,6,251	0/0:43,0:35:33.50:0,33,1190	0/0:7,0:7:6.02:0,6,357	0/0:10,0:9:21.74:0,22,621	0/0:11,0:8:9.03:0,9,504	0/0:12,0:7:16.87:0,17,600
chr10	40787110	.	G	GGC	4289.44	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-6.866;DP=622;FS=6.891;HRun=0;HaplotypeScore=93.2217;InbreedingCoeff=0.9976;MQ=82.15;MQ0=0;MQRankSum=-1.213;QD=54.30;ReadPosRankSum=2.954;VQSLOD=5.3790;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,117,1776	0/0:7,0:7:21.05:0,21,316	0/0:20,0:20:60.17:0,60,891	0/0:21,0:22:42.70:0,43,767	1/1:0,16:16:42.14:848,42,0	0/0:24,0:24:57.18:0,57,902	0/0:26,0:26:72.13:0,72,1094	0/0:32,0:32:93.28:0,93,1443	0/0:30,0:29:84.06:0,84,1234	0/0:19,0:19:54.14:0,54,852	0/0:13,0:13:33.11:0,33,537	0/0:19,0:19:54.18:0,54,854	0/0:26,0:25:66.21:0,66,1046	1/1:1,17:18:45.15:886,45,0	0/0:34,0:34:99:0,99,1576	1/1:0,21:21:60.21:1216,60,0	1/1:0,24:24:66.23:1339,66,0	0/0:13,0:13:36.12:0,36,584	0/0:23,0:23:69.21:0,69,1072	0/0:15,0:15:45.15:0,45,734	0/0:40,0:40:99:0,114,1710	0/0:16,0:16:45.11:0,45,703	0/0:19,0:19:57.19:0,57,912	0/0:25,0:25:69.21:0,69,1098	0/0:19,0:19:54.18:0,54,880	0/0:21,0:21:60.20:0,60,952	0/0:31,0:31:93.20:0,93,1425	0/0:7,0:7:21.07:0,21,342
chr10	40788504	.	C	CAAAAA	6535.79	PASS	AB=0.687;AC=36;AF=0.643;AN=56;BaseQRankSum=1.349;DP=654;FS=3.367;HRun=15;HaplotypeScore=155.9753;InbreedingCoeff=-0.0497;MQ=74.28;MQ0=2;MQRankSum=-5.499;QD=11.02;ReadPosRankSum=-6.535;VQSLOD=-0.5748;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:18,0:43:0.29:0,0,156	0/1:1,0:7:2.32:9,0,2	0/1:30,0:21:38.66:39,0,131	0/0:21,0:13:0.94:0,1,69	1/1:16,0:38:29.23:198,29,0	0/1:6,0:20:53.91:64,0,54	1/1:12,0:23:22.33:367,22,0	1/1:21,1:36:66.62:1107,67,0	1/1:6,0:19:13.65:196,14,0	0/1:10,0:26:10.33:219,0,10	0/1:8,0:16:24.77:61,0,25	0/1:15,0:15:12.16:12,0,104	0/1:16,0:24:17.70:242,0,18	0/1:13,0:26:29.78:51,0,30	0/1:12,0:24:11.78:14,0,12	1/1:6,0:14:9.47:87,9,0	0/1:16,0:33:49.85:50,0,70	0/1:10,0:24:21.11:101,0,21	1/1:16,0:24:41.56:443,42,0	1/1:19,0:19:40.93:703,41,0	1/1:8,0:8:21.06:310,21,0	0/1:6,0:24:61.34:61,0,79	0/0:16,0:17:29.35:0,29,379	0/0:20,0:23:55.25:0,55,693	0/1:7,0:21:29.63:62,0,30	1/1:15,3:34:73.97:1247,74,0	1/1:13,13:30:30.57:635,31,0	1/1:11,0:12:18.03:259,18,0
chr10	40788781	.	G	GA	5453.42	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-12.105;DP=645;FS=2.929;HRun=9;HaplotypeScore=62.9847;InbreedingCoeff=0.9962;MQ=70.50;MQ0=3;MQRankSum=1.492;QD=26.47;ReadPosRankSum=0.412;VQSLOD=5.3142;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:42,3:45:38.58:0,39,789	1/1:0,6:6:18.05:199,18,0	0/0:45,0:29:25.30:0,25,314	0/0:42,0:18:29.80:0,30,234	1/1:3,26:29:72.19:796,72,0	0/0:24,0:24:62.92:0,63,535	0/0:12,0:12:32.99:0,33,286	0/0:22,0:22:41.95:0,42,364	0/0:28,0:28:74.98:0,75,651	1/1:4,23:27:49.29:768,49,0	1/1:3,12:15:39.09:423,39,0	0/0:18,0:18:47.96:0,48,413	0/0:15,0:15:41.97:0,42,361	1/1:5,17:22:63.09:671,63,0	1/1:3,21:24:54.15:597,54,0	1/1:1,19:20:25.08:505,25,0	1/1:3,24:26:54.15:597,54,0	1/1:3,16:19:42.11:464,42,0	0/0:20,0:20:17.88:0,18,378	0/0:21,0:21:59.67:0,60,506	0/0:15,0:15:35.98:0,36,313	0/0:18,0:18:47.96:0,48,414	0/0:11,0:11:29.99:0,30,260	0/0:29,0:29:80.98:0,81,703	1/1:2,15:17:39.11:431,39,0	0/0:18,1:19:20.79:0,21,407	0/0:40,0:39:99:0,108,936	0/0:15,0:15:35.97:0,36,312
chr10	40789005	.	G	GACAAACAAACAA	3885.69	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-4.347;DP=643;FS=3.409;HRun=0;HaplotypeScore=245.0560;InbreedingCoeff=0.7731;MQ=69.38;MQ0=5;MQRankSum=-6.103;QD=64.76;ReadPosRankSum=-3.545;VQSLOD=2.8369;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:28,7:36:39.13:1791,39,0	0/0:3,0:3:6.02:0,6,207	0/0:21,0:19:3.01:0,3,42	0/0:28,0:25:8.98:0,9,82	0/0:24,0:24:40.50:0,41,837	0/0:25,0:25:48.08:0,48,1000	0/0:20,0:20:27.08:0,27,558	0/0:25,0:25:17.92:0,18,166	0/0:25,0:25:39.13:0,39,1001	0/0:24,0:24:45.13:0,45,1400	0/0:16,0:16:18.06:0,18,615	0/0:17,0:17:39.12:0,39,1116	0/0:15,0:15:21.07:0,21,584	0/0:13,0:13:3.25:0,3,442	0/0:20,0:20:45.15:0,45,1384	0/0:20,0:20:33.07:0,33,705	0/0:39,0:38:60.55:0,61,1230	0/0:26,0:26:51.17:0,51,1692	0/0:15,0:14:15.05:0,15,359	0/0:33,0:33:60.14:0,60,1199	0/0:31,0:30:53.65:0,54,1121	1/1:11,9:24:48.16:2095,48,0	0/0:21,0:21:42.13:0,42,1196	0/0:30,0:30:69.21:0,69,2111	0/0:17,0:17:30.10:0,30,875	0/0:32,0:32:72.48:0,72,1425	0/0:27,0:27:32.93:0,33,701	0/0:16,0:16:36.12:0,36,763
chr10	40789031	.	CAAACAA	C	2614.45	PASS	AB=1.000;AC=16;AF=0.286;AN=56;BaseQRankSum=3.856;DP=686;FS=0.396;HRun=0;HaplotypeScore=183.7296;InbreedingCoeff=-0.0470;MQ=63.00;MQ0=8;MQRankSum=-0.546;QD=6.81;ReadPosRankSum=-7.760;VQSLOD=-0.3748;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:98.10:0,98,1854	0/0:4,0:4:12.04:0,12,329	0/0:17,0:13:15.37:0,15,609	0/0:25,0:22:57.17:0,57,1178	0/1:24,0:23:47.27:47,0,1445	0/1:24,0:24:52.91:53,0,1502	0/1:28,0:28:99:107,0,937	0/1:42,0:42:99:332,0,1432	1/1:4,17:21:51.16:1063,51,0	0/0:27,0:26:75.25:0,75,2205	0/0:18,0:18:49.04:0,49,1233	0/0:20,0:20:60.20:0,60,1796	1/1:1,10:11:27.09:560,27,0	0/1:16,0:16:64.34:64,0,709	0/0:19,0:19:56.97:0,57,1805	0/1:25,0:25:69.85:70,0,1202	0/1:40,0:39:28.94:29,0,2295	0/0:26,0:26:75.23:0,75,2293	0/1:23,0:22:99:268,0,613	0/1:36,0:36:99:130,0,1957	0/1:36,0:35:5.06:5,0,2035	0/0:25,0:25:72.25:0,72,1931	0/0:20,0:20:60.21:0,60,1811	0/0:33,0:33:99:0,99,3007	0/0:13,0:13:39.13:0,39,1271	0/1:36,0:36:38.84:39,0,2554	0/1:22,0:21:17.16:17,0,1074	0/0:16,0:16:9.36:0,9,1068
chr10	40789039	.	C	CAG	15654.56	PASS	AB=1.000;AC=31;AF=0.554;AN=56;BaseQRankSum=-8.726;DP=682;FS=9.160;HRun=0;HaplotypeScore=98.7227;InbreedingCoeff=0.9228;MQ=66.74;MQ0=8;MQRankSum=1.631;QD=36.15;ReadPosRankSum=2.227;VQSLOD=7.0697;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:35,0:35:99:118,0,710	0/0:5,0:5:12.04:0,12,172	0/0:17,0:14:22.21:0,22,450	0/0:23,0:20:51.14:0,51,683	1/1:1,26:26:63.05:1113,63,0	1/1:0,22:22:60.21:1099,60,0	1/1:2,26:28:39.13:713,39,0	1/1:1,36:37:99:1885,108,0	1/1:18,4:22:50.95:408,51,0	0/0:27,0:26:75.23:0,75,1029	0/0:14,0:14:39.13:0,39,558	0/0:21,0:21:57.18:0,57,799	1/1:11,1:12:28.13:217,28,0	1/1:0,15:16:36.12:641,36,0	0/0:19,0:19:54.17:0,54,741	1/1:1,22:23:54.19:988,54,0	1/1:4,37:40:81.28:1481,81,0	0/0:28,0:28:78.23:0,78,1078	1/1:3,18:21:51.17:929,51,0	1/1:2,31:35:84.22:1495,84,0	1/1:1,35:36:72.25:1319,72,0	0/0:26,0:26:29.92:0,30,616	0/0:19,0:19:57.17:0,57,783	0/0:34,0:34:96.28:0,96,1339	0/0:16,0:16:48.16:0,48,686	1/1:2,35:36:62.36:1766,62,0	1/1:1,22:22:42.14:768,42,0	1/1:0,16:16:39.13:714,39,0
chr10	40789507	.	A	AAGTGGGGGTGGG	30139.69	PASS	AB=0.641;AC=28;AF=0.500;AN=56;BaseQRankSum=-4.601;DP=617;FS=2.001;HRun=0;HaplotypeScore=181.2491;InbreedingCoeff=0.8470;MQ=87.10;MQ0=0;MQRankSum=-16.982;QD=93.60;ReadPosRankSum=-3.477;VQSLOD=4.3650;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,129,4463	0/0:10,0:10:27.09:0,27,981	0/0:28,0:28:57.19:0,57,1857	0/0:26,0:26:57.12:0,57,1592	1/1:8,7:22:12:564,12,0	1/1:7,7:21:30.10:1708,30,0	1/1:8,8:20:42.14:1967,42,0	1/1:18,3:35:90.29:4103,90,0	1/1:6,9:16:36.12:2113,36,0	0/0:14,0:14:29.30:0,29,880	0/0:18,0:18:48.15:0,48,1529	0/0:22,0:22:60.20:0,60,2125	1/1:7,9:22:41.70:2272,42,0	1/1:4,10:20:36.12:2100,36,0	0/0:12,0:12:33.10:0,33,1082	1/1:4,2:11:18.06:889,18,0	0/1:13,7:26:48.70:1904,0,49	0/0:25,0:25:72.25:0,72,2440	1/1:13,7:28:75.26:3608,75,0	1/1:4,13:24:36.12:2052,36,0	1/1:7,2:15:12:551,12,0	0/0:23,0:23:60.18:0,60,2008	0/0:14,0:14:36.12:0,36,1225	0/0:28,0:28:75.26:0,75,2700	0/0:24,0:24:60.03:0,60,1972	0/1:6,4:16:99:1704,0,282	1/1:8,16:33:63.22:3646,63,0	1/1:11,0:11:26.98:959,27,0
chr10	40789821	.	CTGTTTTGTTT	C	7122.15	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=12.389;DP=685;FS=16.746;HRun=0;HaplotypeScore=208.8369;InbreedingCoeff=0.9781;MQ=69.52;MQ0=3;MQRankSum=-7.157;QD=44.24;ReadPosRankSum=-1.131;VQSLOD=3.0510;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:25:39.13:0,39,1431	0/0:8,0:8:24.08:0,24,956	0/0:36,0:30:56.14:0,56,1837	0/0:43,0:31:45.20:0,45,1440	0/0:27,0:27:72.24:0,72,3017	0/0:28,0:28:81.26:0,81,3578	0/0:25,0:25:69.24:0,69,3292	1/1:12,20:32:54.12:1071,54,0	0/0:13,0:13:36.12:0,36,1758	0/0:27,0:27:75.25:0,75,3311	0/0:25,0:25:69.24:0,69,3178	0/0:14,0:14:36.11:0,36,1595	0/0:23,0:23:69.24:0,69,2957	0/0:22,0:22:63.20:0,63,2640	0/0:30,0:30:78.27:0,78,3572	0/0:22,0:22:60.21:0,60,2953	0/0:25,0:25:72.25:0,72,3204	0/0:24,0:24:60.21:0,60,2632	1/1:5,14:19:42.12:985,42,0	1/1:2,14:16:30.10:923,30,0	1/1:8,16:24:9.03:218,9,0	0/0:10,0:19:39.11:0,39,1069	0/0:23,0:23:51.18:0,51,2400	0/0:37,0:37:99:0,102,4341	0/0:26,0:26:72.25:0,72,3387	1/1:2,23:25:63.19:1600,63,0	1/1:6,28:34:65.72:2046,66,0	1/1:0,11:11:9.03:279,9,0
chr10	40790393	.	C	CT	5813.89	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-14.173;DP=592;FS=1.971;HRun=7;HaplotypeScore=58.6416;InbreedingCoeff=0.9995;MQ=85.70;MQ0=0;MQRankSum=-2.272;QD=29.66;ReadPosRankSum=-0.401;VQSLOD=5.1189;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:69.06:0,69,653	0/0:11,0:11:30.05:0,30,290	0/0:27,0:28:54.70:0,55,526	0/0:23,0:23:40.88:0,41,361	0/0:20,0:20:60.10:0,60,579	1/1:3,17:20:25.19:587,25,0	1/1:5,19:24:51.16:616,51,0	1/1:6,24:30:72.21:858,72,0	0/0:22,0:22:57.09:0,57,550	0/0:27,0:27:72.12:0,72,695	0/0:18,0:18:39.05:0,39,376	0/0:12,0:12:36.06:0,36,348	0/0:22,0:22:57.09:0,57,550	0/0:15,0:15:42.07:0,42,405	0/0:23,0:23:69.09:0,69,655	0/0:25,0:25:69.07:0,69,649	0/0:37,0:37:84.10:0,84,805	0/0:17,0:17:48.07:0,48,463	1/1:3,19:22:54.15:641,54,0	1/1:3,19:21:51.12:601,51,0	1/1:2,20:22:60.18:720,60,0	0/0:19,0:19:54.07:0,54,515	0/0:12,0:12:33.05:0,33,319	0/0:14,0:14:39.06:0,39,375	0/0:25,0:25:72.07:0,72,682	1/1:2,27:29:81.20:940,81,0	1/1:3,12:15:36.11:435,36,0	1/1:1,11:12:36.03:415,36,0
chr10	40791287	.	TGG	T	6417.53	PASS	AB=0.974;AC=52;AF=0.929;AN=56;BaseQRankSum=-0.468;DP=438;FS=129.849;HRun=7;HaplotypeScore=188.5616;InbreedingCoeff=0.1836;MQ=63.13;MQ0=1;MQRankSum=-0.531;QD=14.72;ReadPosRankSum=6.972;VQSLOD=-0.1219;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:20,8:28:24.87:267,25,0	1/1:1,3:4:9.03:111,9,0	0/1:25,0:12:8.63:9,0,153	0/1:35,0:23:83.12:83,0,128	1/1:6,0:8:12.98:136,13,0	1/1:8,3:11:10.22:130,10,0	1/1:14,9:23:31.19:368,31,0	1/1:9,3:12:19.35:172,19,0	1/1:10,10:20:18.53:404,19,0	1/1:15,9:24:35.52:506,36,0	1/1:7,1:8:11.04:95,11,0	1/1:3,7:10:19.77:253,20,0	1/1:6,10:16:31.24:372,31,0	1/1:12,0:12:26.61:248,27,0	1/1:4,10:14:33.08:394,33,0	1/1:12,0:11:8.98:109,9,0	1/1:14,0:14:14.05:213,14,0	1/1:2,2:4:5.49:57,5,0	1/1:7,1:8:3.61:101,4,0	1/1:7,3:11:0.95:155,1,0	1/1:9,7:15:6.20:47,6,0	1/1:8,9:17:24.77:306,25,0	1/1:10,7:17:25.91:286,26,0	1/1:15,11:26:39.05:436,39,0	1/1:6,8:14:22.98:282,23,0	1/1:19,8:27:22.74:405,23,0	1/1:5,13:18:38.03:473,38,0	0/0:2,0:2:2.49:0,2,7
chr10	40791292	.	G	GA	416.30	PASS	AB=0.848;AC=20;AF=0.357;AN=56;BaseQRankSum=-4.126;DP=430;FS=3.923;HRun=0;HaplotypeScore=216.8412;InbreedingCoeff=-0.2301;MQ=59.59;MQ0=3;MQRankSum=-1.386;QD=1.42;ReadPosRankSum=-0.748;VQSLOD=2.6972;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,3:28:10.17:0,10,148	0/0:4,0:4:7.59:0,8,27	0/1:21,2:9:11.53:12,0,127	0/1:35,2:22:19.80:20,0,183	0/1:3,5:8:4.02:4,0,12	0/0:13,0:13:19.08:0,19,74	0/1:20,5:25:33.86:34,0,124	0/0:11,2:13:7.81:0,8,102	0/1:16,3:19:29.82:30,0,73	0/1:21,3:24:99:104,0,108	1/1:7,1:8:0.89:26,1,0	0/0:10,0:10:20.19:0,20,74	0/0:15,1:16:15.95:0,16,128	1/1:6,4:10:20.66:91,21,0	0/1:11,2:13:0.90:1,0,68	0/1:5,5:10:28.06:42,0,28	0/1:6,6:13:6.43:39,0,6	0/0:5,0:5:9.36:0,9,44	0/1:5,2:7:21.89:40,0,22	0/1:9,1:10:16.08:16,0,23	0/0:18,1:18:6.36:0,6,43	0/1:17,2:19:5.55:6,0,103	0/1:15,1:16:46.72:47,0,48	0/1:20,2:22:21.94:22,0,57	0/0:11,2:13:10.01:0,10,85	0/1:22,3:25:36.37:36,0,125	0/0:14,1:15:38.28:0,38,154	0/1:4,0:4:2.15:2,0,9
chr10	40791293	.	G	GA	455.88	PASS	AB=0.844;AC=19;AF=0.339;AN=56;BaseQRankSum=-2.256;DP=430;FS=3.614;HRun=0;HaplotypeScore=217.9140;InbreedingCoeff=-0.1393;MQ=58.06;MQ0=3;MQRankSum=-3.773;QD=1.73;ReadPosRankSum=-0.641;VQSLOD=2.6337;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:25,3:28:1.06:1,0,100	0/0:4,0:4:7.21:0,7,25	0/1:22,2:9:17.75:18,0,129	0/0:36,2:22:8.80:0,9,235	0/1:3,5:8:4.72:12,0,5	0/0:13,0:13:10.83:0,11,39	0/1:22,5:27:45.90:46,0,107	0/0:11,2:13:0.49:0,0,52	0/1:16,3:19:44.10:50,0,44	0/1:19,3:22:38.77:39,0,77	1/1:7,1:8:1.99:35,2,0	0/0:10,0:10:17.79:0,18,63	0/0:15,1:16:7.88:0,8,90	1/1:6,4:10:23.17:112,23,0	0/1:12,2:13:8.44:8,0,56	0/1:4,5:9:7.99:54,0,8	0/1:7,6:13:5.31:51,0,5	0/0:5,0:5:7.96:0,8,32	0/1:5,2:7:7.05:47,0,7	0/1:9,1:10:6.42:6,0,27	0/0:18,1:18:9.19:0,9,39	0/0:17,2:19:13.97:0,14,95	0/1:14,1:15:28.26:41,0,28	0/1:19,2:21:13.41:13,0,51	0/0:12,2:14:6.10:0,6,67	0/1:22,3:25:43.56:69,0,44	0/0:14,1:15:36.66:0,37,132	0/1:4,0:4:1.27:6,0,1
chr10	40791337	.	G	GAAGA	813.63	PASS	AB=0.972;AC=14;AF=0.250;AN=56;BaseQRankSum=6.298;DP=547;FS=33.684;HRun=0;HaplotypeScore=239.9086;InbreedingCoeff=-0.2209;MQ=42.22;MQ0=8;MQRankSum=-6.842;QD=3.52;ReadPosRankSum=1.937;VQSLOD=1.3738;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:86.08:0,86,1509	0/0:4,0:4:12:0,12,145	1/1:14,0:3:1.55:4,2,0	0/0:20,0:3:4.25:0,4,32	0/0:15,0:15:23.92:0,24,373	0/1:13,0:13:48.15:48,0,370	0/1:22,0:21:0.19:0,0,588	0/0:30,0:29:2.22:0,2,813	0/0:24,0:24:54.16:0,54,1014	0/1:23,0:23:39.88:40,0,730	0/0:12,0:10:8.93:0,9,256	0/1:19,0:18:5.86:6,0,658	0/0:22,0:22:45.50:0,46,860	0/1:15,1:16:31.51:32,0,332	0/0:18,0:17:47.93:0,48,802	0/1:19,0:18:99:248,0,229	0/1:10,0:10:38.80:39,0,73	0/0:9,0:9:20.13:0,20,357	0/0:27,0:24:65.13:0,65,878	0/1:18,0:17:99:145,0,325	0/0:39,0:38:99:0,100,1628	0/1:25,0:24:16.94:17,0,647	0/0:14,0:13:19.99:0,20,502	0/0:27,0:26:62.78:0,63,1031	0/1:10,0:10:56.28:56,0,290	0/1:31,1:33:99:170,0,999	0/0:16,0:16:32.12:0,32,528	0/1:5,2:7:99:152,0,149
chr10	40792308	.	CAA	C	6069.76	PASS	AB=0.556;AC=45;AF=0.804;AN=56;BaseQRankSum=0.470;DP=448;FS=3.270;HRun=10;HaplotypeScore=67.3673;InbreedingCoeff=0.7883;MQ=43.19;MQ0=21;MQRankSum=0.585;QD=17.00;ReadPosRankSum=0.898;VQSLOD=3.4457;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,29:33:65.40:705,65,0	1/1:1,7:6:15.04:167,15,0	0/0:28,0:5:5.84:0,6,130	0/0:34,0:5:12.51:0,13,172	1/1:3,0:20:35.65:155,36,0	1/1:12,7:19:7.27:223,7,0	1/1:2,4:6:11.39:108,11,0	1/1:7,19:26:13.13:551,13,0	1/1:2,6:7:13.56:164,14,0	1/1:10,13:21:20.46:418,20,0	1/1:8,13:21:42.10:463,42,0	0/0:12,0:11:21.07:0,21,318	1/1:4,7:10:21.97:214,22,0	1/1:2,0:12:20.10:86,20,0	1/1:4,8:12:21.03:220,21,0	1/1:7,0:10:15.47:64,15,0	1/1:12,0:18:31.10:132,31,0	1/1:5,10:14:28.60:300,29,0	0/1:3,12:14:22.52:216,0,23	1/1:8,12:19:19.17:351,19,0	1/1:0,3:3:9.02:100,9,0	1/1:3,7:10:21.05:234,21,0	0/0:9,0:8:24.08:0,24,381	0/0:6,0:6:18.06:0,18,285	1/1:3,10:13:36.09:389,36,0	1/1:12,11:23:33.72:390,34,0	1/1:10,10:18:26.60:318,27,0	1/1:3,3:4:9.91:102,10,0
chr10	40792317	.	AAT	A	2553.96	PASS	AB=0.987;AC=35;AF=0.625;AN=56;BaseQRankSum=5.206;DP=433;FS=14.449;HRun=0;HaplotypeScore=76.9663;InbreedingCoeff=0.1506;MQ=50.79;MQ0=19;MQRankSum=-5.138;QD=7.74;ReadPosRankSum=4.703;VQSLOD=1.9371;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:32,1:33:43.46:332,43,0	0/1:10,0:8:30.43:42,0,30	0/0:33,0:9:19.51:0,20,234	0/0:38,0:7:18.20:0,18,181	0/1:19,0:19:15.18:15,0,32	1/1:12,0:12:29.06:174,29,0	1/1:5,0:5:10.67:50,11,0	1/1:21,1:22:19.49:174,19,0	1/1:6,0:5:13.91:76,14,0	0/1:20,1:20:10.03:171,0,10	0/1:18,0:18:29.26:132,0,29	0/0:13,0:12:29.84:0,30,363	1/1:11,0:10:22.82:139,23,0	1/1:12,0:11:0.40:23,0,0	0/1:12,0:12:1.87:117,0,2	0/1:10,0:9:29.59:30,0,61	0/1:20,0:18:15.69:121,0,16	1/1:12,1:12:27.40:169,27,0	0/1:18,0:16:40.71:125,0,41	1/1:15,0:14:7.35:101,7,0	0/1:5,0:5:30.55:31,0,34	1/1:7,0:7:17.48:70,17,0	0/0:13,0:13:39.06:0,39,510	0/0:6,0:6:18.05:0,18,271	0/1:16,2:18:77.13:163,0,77	1/1:18,2:20:19.11:247,19,0	1/1:16,1:15:32.20:195,32,0	0/1:6,0:5:8.99:42,0,9
chr10	40792625	.	C	CAGTT	10390.35	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-11.000;DP=615;FS=2.047;HRun=0;HaplotypeScore=97.5202;InbreedingCoeff=0.9996;MQ=79.12;MQ0=0;MQRankSum=-4.808;QD=62.59;ReadPosRankSum=2.339;VQSLOD=7.0637;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,153,2880	0/0:11,0:11:30.09:0,30,548	0/0:16,0:16:45.15:0,45,828	0/0:16,0:16:35.65:0,36,682	1/1:6,16:22:39.60:752,40,0	1/1:4,18:22:57.11:1435,57,0	1/1:4,20:26:63.13:1596,63,0	0/0:26,0:26:75.21:0,75,1406	1/1:4,14:18:51.13:1310,51,0	0/0:18,0:18:51.17:0,51,975	0/0:22,0:22:57.20:0,57,1094	0/0:29,0:29:87.30:0,87,1685	1/1:2,10:13:33.05:782,33,0	1/1:2,17:19:48.16:1314,48,0	0/0:19,0:19:57.20:0,57,1105	1/1:2,18:22:60.21:1620,60,0	1/1:2,19:23:60.16:1581,60,0	0/0:20,0:20:60.18:0,60,1117	0/0:26,0:26:66.19:0,66,1198	0/0:26,0:26:75.26:0,75,1451	0/0:20,0:20:57.20:0,57,1105	0/0:18,0:18:51.14:0,51,921	0/0:15,0:15:39.10:0,39,678	0/0:24,0:24:66.20:0,66,1244	0/0:25,0:25:75.24:0,75,1421	0/0:23,0:23:66.21:0,66,1241	0/0:33,0:33:96.32:0,96,1826	0/0:10,0:10:27.09:0,27,523
chr10	40792953	.	C	CA	5763.94	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-13.775;DP=655;FS=4.476;HRun=7;HaplotypeScore=61.7243;InbreedingCoeff=0.9878;MQ=78.07;MQ0=0;MQRankSum=-1.710;QD=29.11;ReadPosRankSum=1.356;VQSLOD=5.6543;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:90.14:0,90,869	0/0:15,0:15:42.06:0,42,406	0/0:17,0:17:33.96:0,34,281	0/0:19,0:19:18.04:0,18,255	1/1:3,33:36:96.21:1127,96,0	1/1:2,21:23:57.17:689,57,0	1/1:7,15:22:13.15:442,13,0	0/0:30,0:30:74.89:0,75,702	1/1:3,21:24:60.18:725,60,0	0/0:25,0:25:69.06:0,69,652	0/0:22,0:22:63.10:0,63,608	0/0:27,0:27:78.13:0,78,753	1/1:2,21:23:63.19:753,63,0	1/1:2,24:26:63.19:760,63,0	0/0:26,0:26:72.10:0,72,690	1/1:2,20:22:48.15:580,48,0	1/1:1,21:22:57.17:689,57,0	0/0:16,0:16:48.08:0,48,463	0/0:19,0:19:47.85:0,48,442	0/0:29,0:29:72.09:0,72,690	0/0:19,0:19:57.09:0,57,550	0/0:22,0:22:60.08:0,60,575	0/0:22,0:22:63.08:0,63,603	0/0:31,0:31:87.14:0,87,840	0/0:20,1:21:10.98:0,11,498	0/0:32,0:32:90.11:0,90,861	0/0:24,0:24:66.10:0,66,637	0/0:8,0:8:24.04:0,24,232
chr10	40793679	.	TTC	T	508.85	PASS	AB=0.904;AC=9;AF=0.173;AN=52;BaseQRankSum=3.006;DP=357;FS=11.572;HRun=0;HaplotypeScore=76.0614;InbreedingCoeff=0.3218;MQ=40.60;MQ0=27;MQRankSum=1.136;QD=4.07;ReadPosRankSum=0.153;VQSLOD=1.2865;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:22:3.42:0,3,24	0/0:9,0:8:13.21:0,13,132	./.	./.	1/1:30,0:26:0.37:2,0,0	1/1:20,0:17:6.21:195,6,0	0/1:16,11:25:20.16:20,0,66	0/0:20,0:14:1.75:0,2,5	1/1:16,0:14:23.61:202,24,0	0/0:19,0:15:25.31:0,25,300	0/0:9,0:7:5.69:0,6,58	0/0:8,0:8:24.08:0,24,332	0/1:17,0:17:11.59:207,0,12	0/0:7,0:6:5.43:0,5,29	0/0:10,0:10:8.47:0,8,131	0/0:14,0:14:2.91:0,3,7	0/1:15,0:13:1.38:1,0,44	0/0:8,0:6:9.66:0,10,80	0/0:5,0:3:3.98:0,4,21	0/0:8,0:8:2.21:0,2,24	0/0:14,0:11:0:0,0,0	0/0:6,0:5:0:0,0,0	0/0:10,0:8:17.98:0,18,197	0/0:14,0:13:11.80:0,12,183	0/0:12,0:7:15.05:0,15,224	0/0:14,0:13:2.30:0,2,5	0/0:10,0:10:0.93:0,1,4	0/0:9,0:8:0.94:0,1,2
chr10	40795000	.	TC	T	1502.23	PASS	AB=0.953;AC=19;AF=0.339;AN=56;BaseQRankSum=-0.265;DP=449;FS=10.678;HRun=10;HaplotypeScore=63.7782;InbreedingCoeff=0.3517;MQ=79.68;MQ0=0;MQRankSum=0.134;QD=6.92;ReadPosRankSum=2.476;VQSLOD=0.6789;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,1:23:2.92:0,3,233	0/0:1,0:1:2.97:0,3,20	0/1:21,1:20:14.30:14,0,121	0/0:17,2:19:35.54:0,36,343	1/1:2,14:16:32.99:286,33,0	0/1:11,0:11:10.80:11,0,19	1/1:16,0:16:1.68:4,2,0	0/1:21,1:22:15.12:15,0,201	1/1:12,0:12:6.68:15,7,0	0/1:17,1:18:1.09:1,0,196	0/0:7,0:7:6.01:0,6,66	0/0:14,1:15:18.95:0,19,382	0/1:10,0:10:2.66:3,0,13	1/1:3,9:12:23.99:208,24,0	0/0:18,0:18:40.18:0,40,375	1/1:4,20:24:64.23:550,64,0	1/1:5,22:27:62.81:547,63,0	0/0:14,1:15:10.95:0,11,294	0/1:20,1:21:2.77:3,0,211	0/0:13,0:13:14.56:0,15,106	0/0:14,0:14:9.02:0,9,100	0/0:16,0:15:0.58:0,1,230	0/0:10,0:11:15.87:0,16,148	0/0:26,0:26:49.32:0,49,514	0/0:9,0:9:3.18:0,3,109	0/0:19,0:18:25.56:0,26,201	0/0:26,0:25:63.38:0,63,601	0/1:5,1:6:14.11:14,0,61
chr10	40795007	.	CCCCT	C	147.37	PASS	AB=1.000;AC=6;AF=0.107;AN=56;BaseQRankSum=2.329;DP=446;FS=0.000;HRun=0;HaplotypeScore=89.9268;InbreedingCoeff=0.5326;MQ=78.49;MQ0=0;MQRankSum=-2.512;QD=2.78;ReadPosRankSum=-3.034;VQSLOD=1.0938;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:41.54:0,42,592	0/0:3,0:3:8.96:0,9,92	0/0:20,0:18:23.39:0,23,556	0/0:20,0:20:45.77:0,46,763	0/0:17,0:17:36.02:0,36,411	0/1:14,0:14:13.05:74,0,13	0/1:17,0:17:9.14:9,0,12	0/0:21,0:21:20.81:0,21,619	1/1:12,0:12:14.59:85,15,0	0/0:14,0:14:27.43:0,27,518	0/0:7,0:7:8.59:0,9,123	0/0:17,0:17:48.15:0,48,955	1/1:5,5:10:6.02:103,6,0	0/0:12,0:12:30.08:0,30,352	0/0:18,0:18:45.08:0,45,826	0/0:25,0:25:59.17:0,59,823	0/0:26,0:26:75.14:0,75,847	0/0:15,0:15:42.10:0,42,760	0/0:15,0:15:36.09:0,36,703	0/0:11,0:11:11.32:0,11,189	0/0:14,0:14:15:0,15,270	0/0:14,0:14:26.76:0,27,601	0/0:13,0:13:30.44:0,30,418	0/0:25,0:25:60.11:0,60,1176	0/0:13,0:13:9.09:0,9,385	0/0:17,0:16:8.66:0,9,442	0/0:30,0:29:69.09:0,69,1202	0/0:6,0:6:15.05:0,15,238
chr10	40795008	.	CCCT	C	451.90	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=-0.129;DP=456;FS=5.867;HRun=0;HaplotypeScore=81.8064;InbreedingCoeff=0.5571;MQ=80.65;MQ0=0;MQRankSum=-1.919;QD=4.76;ReadPosRankSum=-4.139;VQSLOD=0.2802;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:22.74:0,23,406	0/0:3,0:3:8.96:0,9,77	0/0:22,0:20:2.98:0,3,464	0/0:21,0:21:42.26:0,42,593	0/0:18,0:18:38.75:0,39,293	1/1:15,0:15:27.21:233,27,0	1/1:14,2:16:5.89:63,6,0	0/0:22,0:22:13.40:0,13,481	1/1:1,11:12:15.05:224,15,0	0/0:14,0:14:10.74:0,11,418	0/0:7,0:7:8.99:0,9,111	0/0:17,0:17:48.11:0,48,739	1/1:10,0:10:6.01:56,6,0	0/0:14,0:14:32.93:0,33,263	0/0:18,0:18:43.14:0,43,634	0/0:24,1:25:29.14:0,29,517	0/0:27,0:27:77.69:0,78,615	0/0:15,0:15:41.96:0,42,583	0/0:15,0:15:35.53:0,36,556	0/1:12,0:12:9.64:10,0,116	0/0:14,0:14:17.99:0,18,256	0/0:15,0:15:29.88:0,30,510	0/0:13,0:13:30.36:0,30,318	0/0:25,0:25:57.80:0,58,915	0/1:12,0:12:10.27:10,0,285	0/1:18,0:17:11.84:12,0,348	0/0:30,0:29:68.92:0,69,935	0/0:6,0:6:14.96:0,15,167
chr10	40795218	.	TTTTCTCTCTCTCTCTC	T	431.93	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=2.267;DP=498;FS=14.149;HRun=0;HaplotypeScore=207.7847;InbreedingCoeff=0.7635;MQ=61.19;MQ0=22;MQRankSum=1.456;QD=6.45;ReadPosRankSum=-0.203;VQSLOD=1.5413;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:20:57.31:0,57,2017	0/0:9,0:8:23.71:0,24,394	0/0:16,0:10:22.98:0,23,285	0/0:32,0:17:15.05:0,15,743	1/1:11,4:18:24.93:194,25,0	0/0:14,0:14:39.03:0,39,1145	0/1:28,0:26:38.34:38,0,1462	0/0:31,0:30:77.15:0,77,1172	0/0:20,0:20:57.11:0,57,2287	0/0:16,0:16:48.10:0,48,1277	0/0:13,0:13:33.04:0,33,758	0/0:9,0:8:17.95:0,18,137	0/0:8,0:8:23.90:0,24,555	1/1:9,1:10:17.92:142,18,0	0/0:22,0:22:59.75:0,60,1217	0/0:2,14:15:2.97:0,3,20	1/1:8,0:7:10.28:201,10,0	0/0:17,0:16:36.03:0,36,903	0/0:24,0:22:65.35:0,65,2211	0/0:16,0:16:35.10:0,35,957	0/0:23,0:22:56.24:0,56,1467	0/0:15,0:15:34.99:0,35,953	0/0:10,0:10:27.04:0,27,684	0/0:30,0:27:66.06:0,66,3284	0/0:11,0:11:30.07:0,30,1021	0/0:20,0:19:57.07:0,57,1513	0/0:24,0:23:69.06:0,69,1749	0/0:13,0:12:30.90:0,31,699
chr10	40795255	.	TCTCTCTCTCACACACACACACACA	T	2747.11	PASS	AB=0.988;AC=17;AF=0.315;AN=54;BaseQRankSum=7.056;DP=512;FS=16.368;HRun=0;HaplotypeScore=238.2757;InbreedingCoeff=-0.0561;MQ=40.40;MQ0=52;MQRankSum=-5.294;QD=10.17;ReadPosRankSum=-2.835;VQSLOD=0.9888;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:32:23.15:0,23,681	1/1:10,0:10:13.78:348,14,0	./.	0/0:6,0:2:3.01:0,3,64	1/1:26,0:23:1.03:3,1,0	0/0:15,0:14:21.51:0,22,450	0/1:24,0:20:34.87:35,0,284	0/1:16,0:15:43.69:44,0,213	0/0:24,0:22:13.37:0,13,1752	0/1:19,0:16:99:263,0,108	0/1:13,0:12:19.67:20,0,44	0/0:15,0:13:0.47:0,0,1	0/0:14,0:11:29.28:0,29,853	0/1:15,0:14:7.74:45,0,8	1/1:25,0:25:9.16:339,9,0	0/0:15,0:14:9.53:0,10,180	0/1:9,0:5:42.60:43,0,158	0/0:15,0:14:8.32:0,8,117	0/1:18,0:17:99:277,0,772	0/1:23,4:23:99:110,0,296	0/0:28,0:22:15.46:0,15,455	0/1:22,0:21:39.72:40,0,350	0/0:15,0:14:3.47:0,3,250	0/0:40,0:35:55.95:0,56,1934	0/0:11,0:11:15.03:0,15,210	0/1:25,0:24:99:596,0,833	0/1:21,0:19:99:741,0,411	0/0:6,0:4:9.02:0,9,119
chr10	40795263	.	TCACACACACACACACACACACACA	T	1611.29	PASS	AB=0.807;AC=16;AF=0.333;AN=48;BaseQRankSum=6.226;DP=487;FS=16.859;HRun=0;HaplotypeScore=238.1924;InbreedingCoeff=0.1871;MQ=39.68;MQ0=50;MQRankSum=-4.787;QD=6.71;ReadPosRankSum=-2.446;VQSLOD=1.0835;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:32,0:32:0.90:1,0,18	1/1:6,6:12:6.91:373,7,0	./.	./.	1/1:17,0:25:1.46:3,1,0	0/0:13,0:14:15.52:0,16,577	0/0:22,0:18:9.36:0,9,527	0/0:13,0:13:21.07:0,21,368	0/0:23,0:21:26.41:0,26,1573	1/1:13,5:16:1.40:367,1,0	0/0:8,4:11:0:0,0,0	./.	0/0:14,0:11:21.07:0,21,1185	0/0:14,0:14:12.51:0,13,331	1/1:14,8:22:2.99:168,3,0	0/0:15,0:14:15.67:0,16,682	0/0:12,0:8:18.46:0,18,593	0/1:12,3:14:12.25:51,0,12	0/1:13,0:16:77.71:78,0,226	0/1:22,0:19:9.32:9,0,74	1/1:25,0:19:1.72:4,2,0	0/0:15,0:22:8.33:0,8,223	0/0:8,0:16:0.46:0,0,117	0/0:38,0:33:39.91:0,40,1415	./.	0/1:15,1:22:99:383,0,729	0/1:8,0:15:99:305,0,113	0/0:5,0:3:3.01:0,3,39
chr10	40795385	.	GGCATTTTGTCACCATGATAGAAA	G	4771.77	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=8.310;DP=566;FS=10.141;HRun=0;HaplotypeScore=323.8631;InbreedingCoeff=0.9348;MQ=94.72;MQ0=0;MQRankSum=-8.028;QD=103.73;ReadPosRankSum=3.711;VQSLOD=3.4595;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:69.23:0,69,6119	0/0:11,0:11:30.10:0,30,3215	0/0:32,0:32:84.29:0,84,5692	0/0:28,0:27:78.27:0,78,4490	1/1:4,13:17:33.11:2099,33,0	0/0:24,0:24:72.25:0,72,7131	0/0:25,0:25:75.26:0,75,7952	0/0:28,0:28:84.29:0,84,6766	0/0:28,0:28:81.28:0,81,8375	0/0:30,0:30:90.31:0,90,8454	0/0:22,0:22:66.23:0,66,6779	0/0:6,0:5:15.05:0,15,1404	0/0:16,0:16:48.16:0,48,4871	1/1:5,2:7:3.01:191,3,0	0/0:21,0:21:60.21:0,60,6213	1/1:2,12:14:27.09:1718,27,0	1/1:4,4:8:12.04:764,12,0	0/0:11,0:11:33.11:0,33,3274	0/0:31,0:31:93.32:0,93,6843	0/0:24,0:24:69.24:0,69,6701	0/0:24,0:24:66.21:0,66,6223	0/0:20,0:20:60.21:0,60,5880	0/0:16,0:16:48.16:0,48,4440	0/0:19,0:19:57.20:0,57,5343	0/0:15,0:15:45.15:0,45,4855	0/0:26,0:26:72.25:0,72,7073	0/0:30,0:29:87.30:0,87,8267	0/0:8,0:8:24.08:0,24,2548
chr10	40796907	.	AG	A	1297.08	PASS	AB=1.000;AC=12;AF=0.222;AN=54;BaseQRankSum=3.620;DP=438;FS=1.645;HRun=1;HaplotypeScore=62.1913;InbreedingCoeff=0.7536;MQ=51.86;MQ0=8;MQRankSum=-0.982;QD=11.69;ReadPosRankSum=-3.149;VQSLOD=0.8015;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:14:13.89:0,14,276	0/0:6,0:6:15.05:0,15,197	1/1:9,1:4:5.23:23,5,0	./.	1/1:7,8:14:35.86:341,36,0	0/0:16,0:16:47.73:0,48,580	0/0:18,0:16:36.01:0,36,403	0/0:24,0:21:42.69:0,43,563	0/0:18,0:18:36.04:0,36,428	0/0:12,0:12:7.89:0,8,334	0/0:15,0:15:24.17:0,24,349	0/0:10,0:8:21.05:0,21,251	0/1:16,0:15:27.25:27,0,251	1/1:4,4:8:22.21:229,22,0	0/0:15,0:15:32.98:0,33,368	1/1:8,2:10:21.05:257,21,0	1/1:21,7:26:55.85:586,56,0	0/1:24,0:24:5.71:6,0,457	0/0:16,0:15:40.97:0,41,457	0/0:21,0:21:54.24:0,54,593	0/0:11,0:10:20.97:0,21,258	0/0:22,0:22:22.90:0,23,620	0/0:13,0:13:28.25:0,28,400	0/0:18,0:18:44:0,44,493	0/0:15,0:15:31.74:0,32,307	0/0:23,0:22:58.35:0,58,745	0/0:18,0:17:51.04:0,51,604	0/0:18,0:15:33.88:0,34,489
chr10	40796912	.	C	CA	1979.21	PASS	AB=0.905;AC=27;AF=0.482;AN=56;BaseQRankSum=-2.676;DP=462;FS=2.197;HRun=13;HaplotypeScore=67.4986;InbreedingCoeff=0.3895;MQ=58.11;MQ0=7;MQRankSum=1.297;QD=7.25;ReadPosRankSum=-0.677;VQSLOD=2.4490;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,9:14:3.99:176,4,0	1/1:5,4:9:8.96:75,9,0	0/1:15,0:6:10.31:10,0,36	0/1:6,0:4:0:0,0,0	1/1:17,2:19:21.37:171,21,0	0/0:16,0:16:12.99:0,13,45	0/0:17,0:16:17.10:0,17,43	0/0:28,0:25:56.37:0,56,385	0/0:15,0:15:0.94:0,1,69	1/1:5,8:13:18.01:163,18,0	1/1:7,7:16:32.66:271,33,0	0/1:10,0:8:11.34:11,0,32	0/0:16,0:15:29.99:0,30,178	1/1:4,2:8:8.84:62,9,0	1/1:5,8:13:12.01:112,12,0	0/1:10,0:10:14.50:22,0,15	1/1:20,10:29:38.68:439,39,0	0/1:14,11:25:34.63:140,0,35	0/0:17,0:18:35.21:0,35,210	0/0:21,0:22:37.80:0,38,260	0/1:8,0:7:12.96:13,0,67	1/1:5,15:20:9.60:352,10,0	0/1:11,1:13:2.03:2,0,121	0/0:17,0:17:32.57:0,33,226	0/1:5,10:16:14.01:146,0,14	0/1:23,2:24:0.03:0,0,278	0/0:20,0:20:34.56:0,35,229	0/0:18,0:15:8.64:0,9,199
chr10	40796924	.	AAT	A	815.38	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=3.635;DP=452;FS=1.294;HRun=0;HaplotypeScore=70.8454;InbreedingCoeff=0.9289;MQ=60.98;MQ0=4;MQRankSum=0.304;QD=13.37;ReadPosRankSum=1.460;VQSLOD=3.4780;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:36.04:0,36,375	0/0:8,0:8:17.72:0,18,160	0/0:21,0:9:10.16:0,10,219	0/0:9,0:6:11.98:0,12,113	0/0:22,0:21:33.03:0,33,335	1/1:4,10:14:39.38:431,39,0	1/1:1,14:15:33.11:427,33,0	0/0:25,0:25:69.20:0,69,1016	1/1:14,0:14:12.70:58,13,0	0/0:9,0:9:21.06:0,21,255	0/0:17,0:17:39.07:0,39,410	0/0:10,0:9:21.01:0,21,226	1/1:18,0:17:17.52:56,18,0	0/0:10,0:10:18.01:0,18,174	0/0:13,0:13:15.02:0,15,152	0/0:5,0:5:6.02:0,6,82	0/0:29,0:27:60.18:0,60,737	0/0:21,0:21:32.86:0,33,393	0/0:21,0:20:53.93:0,54,668	0/0:19,0:19:41.14:0,41,606	0/0:8,0:7:21.04:0,21,275	0/0:23,0:23:60.12:0,60,661	0/0:10,0:10:30:0,30,398	0/0:14,0:14:36.04:0,36,528	0/0:17,0:17:33.09:0,33,400	0/0:26,0:25:63.12:0,63,912	0/0:20,0:20:51.01:0,51,661	0/0:17,0:16:42.11:0,42,611
chr10	40796925	.	AT	A	656.46	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=5.081;DP=420;FS=0.575;HRun=1;HaplotypeScore=58.6431;InbreedingCoeff=0.9068;MQ=63.02;MQ0=4;MQRankSum=1.406;QD=10.42;ReadPosRankSum=0.317;VQSLOD=1.3067;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:35.18:0,35,263	0/0:7,0:7:17.61:0,18,126	0/0:22,0:9:22.15:0,22,205	0/0:9,0:6:11.98:0,12,105	0/0:14,0:13:30.60:0,31,221	1/1:11,3:14:32.50:299,33,0	1/1:15,1:16:26.61:192,27,0	0/0:26,0:26:75.09:0,75,861	1/1:15,0:15:27.76:146,28,0	0/0:9,0:9:20.79:0,21,159	0/0:16,0:16:22.42:0,22,249	0/0:10,0:9:3.75:0,4,171	1/1:18,0:17:28.53:178,29,0	0/0:7,0:7:17.88:0,18,132	0/0:8,0:8:14.71:0,15,96	0/0:3,0:3:5.98:0,6,57	0/0:27,0:26:65.46:0,65,508	0/0:16,0:16:32.55:0,33,276	0/0:20,0:19:48.93:0,49,525	0/0:17,0:17:38.37:0,38,466	0/0:8,0:7:20.99:0,21,218	0/0:21,0:21:56.89:0,57,414	0/0:11,0:11:30.48:0,30,306	0/0:14,0:14:36.03:0,36,425	0/0:15,0:15:16.45:0,16,246	0/0:25,0:24:60.86:0,61,696	0/0:19,0:19:49.21:0,49,516	0/0:16,0:15:42.03:0,42,477
chr10	40796926	.	TA	T	748.77	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=4.314;DP=411;FS=0.721;HRun=13;HaplotypeScore=56.7777;InbreedingCoeff=0.7916;MQ=63.76;MQ0=4;MQRankSum=-0.636;QD=12.48;ReadPosRankSum=1.311;VQSLOD=3.6804;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:36.11:0,36,510	0/0:7,0:7:20.69:0,21,254	0/0:22,0:9:20:0,20,318	0/0:9,0:6:12.04:0,12,166	0/0:13,1:13:32.84:0,33,439	1/1:14,0:14:18.75:70,19,0	0/1:16,0:16:14.44:14,0,21	0/0:26,0:26:72.18:0,72,1111	1/1:5,7:12:30.02:352,30,0	0/0:9,0:9:21.07:0,21,324	0/0:15,0:15:39.13:0,39,563	0/0:9,0:8:21:0,21,294	1/1:1,17:17:32.18:459,32,0	0/0:7,0:7:18.06:0,18,261	0/0:7,0:7:14.91:0,15,172	0/0:3,0:3:6.02:0,6,86	0/0:29,0:28:72.19:0,72,1013	0/0:15,0:15:32.90:0,33,467	0/0:22,0:20:57.15:0,57,807	0/0:17,0:17:28.16:0,28,600	0/0:7,0:7:21.07:0,21,322	0/0:21,0:21:60.09:0,60,838	0/0:12,0:12:36.10:0,36,504	0/0:14,0:14:36.02:0,36,493	0/0:14,0:14:33.11:0,33,488	0/0:22,0:21:63.20:0,63,964	0/0:19,0:19:54.13:0,54,715	0/0:15,0:14:42.14:0,42,661
chr10	40797644	.	GGA	G	845.14	PASS	AB=0.923;AC=21;AF=0.389;AN=54;BaseQRankSum=0.915;DP=592;FS=5.375;HRun=0;HaplotypeScore=100.5649;InbreedingCoeff=0.2126;MQ=62.09;MQ0=10;MQRankSum=1.284;QD=2.72;ReadPosRankSum=1.735;VQSLOD=1.4599;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,4:32:0.23:0,0,391	0/0:5,0:5:3.01:0,3,37	0/1:35,0:15:0:0,0,0	./.	1/1:10,0:13:2.73:14,3,0	0/0:20,0:21:20.53:0,21,178	0/0:15,0:31:35.90:0,36,332	0/0:20,0:20:6.01:0,6,72	0/0:10,0:17:8.99:0,9,76	0/0:20,0:19:35.69:0,36,355	0/0:16,0:15:5.88:0,6,43	1/1:8,1:11:11.70:94,12,0	0/0:15,0:22:14.96:0,15,132	1/1:10,0:16:11.36:56,11,0	0/0:11,0:12:5.75:0,6,50	1/1:10,0:17:14.20:70,14,0	1/1:24,0:30:19.58:96,20,0	0/0:17,0:17:26.53:0,27,283	0/1:11,0:10:22.21:22,0,41	0/1:29,0:30:17.32:17,0,201	0/1:17,4:21:54.76:83,0,55	0/1:18,1:18:17.80:18,0,150	1/1:12,9:23:17.88:178,18,0	0/1:19,9:28:11.75:295,0,12	0/0:16,0:15:8.93:0,9,66	0/1:26,0:26:7.52:8,0,249	0/1:14,4:19:52.70:53,0,233	0/1:12,0:11:11.32:11,0,99
chr10	40797834	.	GA	G	1804.82	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=9.862;DP=797;FS=2.386;HRun=4;HaplotypeScore=64.4790;InbreedingCoeff=0.9296;MQ=51.28;MQ0=47;MQRankSum=-7.133;QD=19.00;ReadPosRankSum=-1.330;VQSLOD=2.9739;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:90.23:0,90,1208	0/0:10,0:10:24.08:0,24,332	0/0:27,0:5:9:0,9,125	0/0:19,0:1:2.88:0,3,15	0/0:24,0:21:57.18:0,57,797	1/1:4,22:25:39.05:448,39,0	1/1:6,12:12:33.10:391,33,0	0/0:45,0:31:87.23:0,87,1177	1/1:3,18:18:39.05:448,39,0	0/0:27,1:24:30.36:0,30,846	0/0:17,0:17:48.16:0,48,671	0/0:34,0:34:87.24:0,87,1194	1/1:4,26:28:57.17:677,57,0	0/0:35,0:32:84.19:0,84,1115	0/0:30,0:27:72.24:0,72,1007	0/0:35,0:34:90.29:0,90,1243	0/0:43,0:41:99:0,105,1402	0/0:28,0:23:57.19:0,57,796	0/0:20,0:12:30.09:0,30,401	0/0:28,1:29:72.23:0,72,990	0/0:55,1:52:99:0,126,1712	0/0:40,0:38:99:0,99,1376	0/0:16,0:15:42.14:0,42,586	0/0:41,0:38:90.26:0,90,1238	0/0:28,0:28:63.21:0,63,880	0/0:34,0:33:93.30:0,93,1280	0/0:24,0:22:63.20:0,63,865	0/0:6,0:6:12.04:0,12,168
chr10	40798050	.	T	TC	713.81	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=2.956;DP=718;FS=5.436;HRun=5;HaplotypeScore=80.3276;InbreedingCoeff=0.8823;MQ=54.26;MQ0=38;MQRankSum=-0.557;QD=18.30;ReadPosRankSum=0.518;VQSLOD=3.1623;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:29:60.15:0,60,641	0/0:11,0:10:27.03:0,27,277	0/0:21,0:9:12.02:0,12,122	0/0:19,0:10:21.04:0,21,216	0/0:18,0:17:36.04:0,36,386	1/1:6,14:19:3.85:380,4,0	1/1:5,14:18:36.07:443,36,0	0/0:45,0:39:96.21:0,96,1020	0/0:25,0:24:63.13:0,63,665	0/0:34,0:30:81.17:0,81,851	0/0:22,0:21:54.12:0,54,566	0/0:36,0:35:90.22:0,90,967	0/0:18,0:17:42.07:0,42,439	0/0:31,0:24:60.14:0,60,638	0/0:22,0:21:54.06:0,54,555	0/0:19,0:17:45.10:0,45,484	0/0:42,0:42:99:0,111,1168	0/0:22,0:22:60.14:0,60,637	0/0:34,0:29:75.02:0,75,770	0/0:27,0:24:66.13:0,66,696	0/0:43,0:41:99:0,102,1084	0/0:25,0:25:72.15:0,72,762	0/0:30,0:28:72.18:0,72,773	0/0:21,0:18:48.09:0,48,504	0/0:24,0:23:63.15:0,63,670	0/0:27,1:25:69.17:0,69,741	0/0:27,0:24:69.13:0,69,723	0/0:4,0:4:12.02:0,12,122
chr10	40801255	.	T	TGC	453.35	PASS	AB=1.000;AC=10;AF=0.179;AN=56;BaseQRankSum=9.480;DP=654;FS=5.443;HRun=0;HaplotypeScore=110.1411;InbreedingCoeff=0.6475;MQ=64.97;MQ0=4;MQRankSum=-0.984;QD=3.94;ReadPosRankSum=0.607;VQSLOD=2.4210;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:38:27.01:0,27,344	0/0:15,0:15:26.94:0,27,239	0/0:20,0:13:2.69:0,3,135	0/0:29,0:17:15.43:0,15,175	1/1:13,1:14:5.56:45,6,0	0/0:20,0:20:27.27:0,27,399	0/0:19,0:20:53.78:0,54,523	0/0:41,0:40:89.96:0,90,815	0/1:21,0:21:15.88:16,0,291	0/0:23,0:25:27.28:0,27,409	0/0:9,0:9:17.80:0,18,134	0/0:19,0:19:44.21:0,44,406	0/0:17,0:17:17.14:0,17,247	1/1:17,2:21:11.76:103,12,0	0/0:26,0:26:62.98:0,63,609	1/1:6,15:21:9.03:128,9,0	1/1:20,2:22:41.27:307,41,0	0/0:26,0:26:69.44:0,69,689	0/0:29,0:28:34.94:0,35,448	0/0:23,0:23:10.51:0,11,212	0/0:40,0:40:50.49:0,50,668	0/0:19,0:19:14.83:0,15,117	0/0:17,0:17:35.89:0,36,326	0/0:30,0:30:83.99:0,84,874	0/0:17,0:17:10.28:0,10,206	0/0:27,0:25:35.81:0,36,566	0/0:28,0:28:9.77:0,10,509	0/1:16,0:16:7.39:7,0,219
chr10	40801256	.	G	GCGCGCT	1264.79	PASS	AB=1.000;AC=10;AF=0.179;AN=56;BaseQRankSum=6.798;DP=669;FS=0.000;HRun=0;HaplotypeScore=150.6114;InbreedingCoeff=0.7165;MQ=63.82;MQ0=4;MQRankSum=-1.326;QD=8.27;ReadPosRankSum=-0.524;VQSLOD=2.3956;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:43,0:40:30.20:30,0,644	0/0:16,0:16:27.04:0,27,395	0/0:20,0:13:17.78:0,18,314	0/0:27,0:15:29.18:0,29,392	1/1:19,0:19:8.18:89,8,0	0/0:22,0:22:48.10:0,48,843	0/0:21,0:21:34.48:0,34,908	0/0:39,0:38:92.87:0,93,1491	0/0:21,0:21:48.09:0,48,743	0/1:25,0:24:24.55:25,0,810	0/0:9,0:9:18.01:0,18,234	0/0:18,0:18:45.14:0,45,756	0/0:17,0:17:35.57:0,36,482	1/1:6,15:23:12.02:286,12,0	0/0:27,0:27:63.20:0,63,1140	1/1:21,0:21:14.65:301,15,0	1/1:22,0:22:48.04:695,48,0	0/0:28,0:28:72.19:0,72,1266	0/0:28,0:27:72.04:0,72,1048	0/0:23,0:23:30.65:0,31,508	0/0:44,0:44:90.29:0,90,1456	0/0:19,0:19:13.35:0,13,225	0/0:18,0:18:36.58:0,37,610	0/0:30,0:30:84.20:0,84,1541	0/0:18,0:18:32.93:0,33,454	0/0:27,0:25:71.89:0,72,1213	0/0:28,0:28:69.21:0,69,1150	0/0:16,0:16:33.07:0,33,549
chr10	40801258	.	G	GGCT	254.84	PASS	AB=0.989;AC=7;AF=0.125;AN=56;BaseQRankSum=9.368;DP=723;FS=0.000;HRun=0;HaplotypeScore=136.1954;InbreedingCoeff=0.1671;MQ=61.00;MQ0=6;MQRankSum=-0.122;QD=2.01;ReadPosRankSum=-2.467;VQSLOD=1.9618;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:47:41.94:0,42,579	0/0:18,0:18:30.07:0,30,389	0/0:20,0:12:27.97:0,28,342	0/0:25,0:13:30.94:0,31,357	0/1:19,0:19:10.35:10,0,42	0/0:22,0:26:1.55:0,2,600	0/0:20,0:22:33.83:0,34,726	0/0:37,0:36:90.66:0,91,1152	0/0:16,0:26:28.31:0,28,520	0/1:27,0:26:36.03:36,0,565	0/0:9,0:9:25.67:0,26,274	0/0:16,0:19:45.14:0,45,615	0/0:11,0:21:29.44:0,29,412	1/1:21,0:21:14.30:101,14,0	0/0:27,0:32:63.20:0,63,896	0/1:19,0:19:6.81:118,0,7	0/1:23,0:23:99:102,0,278	0/0:26,0:30:58.08:0,58,1026	0/0:29,0:29:64.96:0,65,827	0/0:18,1:27:1.55:0,2,320	0/0:35,0:51:76.96:0,77,1091	0/0:15,0:24:10.51:0,11,208	0/0:14,0:15:36.12:0,36,497	0/0:30,0:35:90.25:0,90,1302	0/1:16,0:18:18.45:18,0,334	0/0:20,0:27:36.18:0,36,825	0/0:21,0:28:52.25:0,52,863	0/0:13,0:20:20.77:0,21,375
chr10	40801260	.	T	TCG	536.33	PASS	AB=0.933;AC=7;AF=0.125;AN=56;BaseQRankSum=7.614;DP=747;FS=4.408;HRun=0;HaplotypeScore=130.7002;InbreedingCoeff=0.3738;MQ=60.31;MQ0=6;MQRankSum=0.115;QD=4.29;ReadPosRankSum=0.470;VQSLOD=2.8993;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:47:20.58:0,21,321	0/0:17,0:17:13.96:0,14,275	0/0:21,0:12:27:0,27,259	0/0:26,0:13:19.38:0,19,190	0/1:24,2:26:14.54:56,0,15	0/0:26,0:26:37.11:0,37,491	0/0:22,0:22:33.99:0,34,505	0/0:37,0:36:96.49:0,96,839	0/1:29,0:29:30.45:30,0,330	0/0:27,0:26:40.40:0,40,510	0/0:11,0:11:0.94:0,1,157	0/0:21,0:21:49.98:0,50,463	0/0:20,0:20:7.24:0,7,178	1/1:21,2:25:14.33:167,14,0	0/0:33,0:33:74.77:0,75,727	1/1:16,0:18:15.52:214,16,0	0/1:23,3:27:81.83:207,0,82	0/0:27,0:27:73.33:0,73,771	0/0:32,0:31:47.80:0,48,563	0/0:29,0:29:19.01:0,19,284	0/0:53,0:52:60.46:0,60,743	0/0:24,0:24:11.82:0,12,91	0/0:14,0:14:32.98:0,33,314	0/0:35,0:35:73.03:0,73,939	0/0:18,0:18:12.96:0,13,219	0/0:29,0:27:44.94:0,45,607	0/0:29,0:29:6.79:0,7,501	0/0:20,0:20:0.16:0,0,274
chr10	40801497	.	C	CAGG	31558.20	PASS	AB=0.917;AC=47;AF=0.839;AN=56;BaseQRankSum=11.329;DP=629;FS=5.145;HRun=0;HaplotypeScore=161.3294;InbreedingCoeff=0.8658;MQ=67.24;MQ0=0;MQRankSum=-6.117;QD=59.10;ReadPosRankSum=2.540;VQSLOD=5.7860;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,49:53:99:2818,129,0	1/1:0,17:18:51.18:1129,51,0	0/1:10,0:11:17.97:18,0,168	0/0:13,0:14:26.99:0,27,323	1/1:0,15:16:36.12:770,36,0	1/1:0,15:17:45.15:986,45,0	1/1:0,15:15:42.14:930,42,0	1/1:1,12:13:37.01:784,37,0	1/1:0,14:14:42.14:925,42,0	1/1:0,29:30:90.30:1990,90,0	1/1:0,14:14:36.12:794,36,0	0/0:28,0:28:84.26:0,84,1504	1/1:0,16:16:48.16:1073,48,0	1/1:0,28:28:81.28:1787,81,0	1/1:0,31:31:90.31:1991,90,0	1/1:0,32:32:90.31:1984,90,0	1/1:1,30:31:75.26:1650,75,0	1/1:1,16:20:49.41:1038,49,0	1/1:0,12:13:39.12:849,39,0	1/1:0,24:27:72.25:1582,72,0	1/1:0,31:31:90.27:1948,90,0	1/1:1,19:21:61.09:1328,61,0	0/0:20,0:20:54.16:0,54,938	0/0:33,0:33:99:0,99,1823	1/1:4,25:29:86.32:1813,86,0	1/1:0,25:27:81.26:1770,81,0	1/1:0,21:22:57.20:1270,57,0	1/1:0,5:5:15.05:331,15,0
chr10	40802024	.	GGATA	G	2959.05	PASS	AB=0.866;AC=20;AF=0.385;AN=52;BaseQRankSum=1.198;DP=641;FS=0.542;HRun=0;HaplotypeScore=130.4512;InbreedingCoeff=0.5868;MQ=71.90;MQ0=7;MQRankSum=-0.107;QD=10.27;ReadPosRankSum=1.498;VQSLOD=3.0445;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:36.09:0,36,747	0/0:12,0:12:18.06:0,18,416	./.	./.	1/1:14,6:21:20.06:255,20,0	0/0:17,0:16:24.07:0,24,514	0/1:23,0:23:18.80:19,0,417	0/0:44,0:43:4.17:0,4,20	0/0:26,0:26:18.04:0,18,290	0/1:13,0:24:12.06:151,0,12	1/1:7,0:15:16.56:88,17,0	0/0:22,0:30:30.06:0,30,454	0/0:21,0:20:24.06:0,24,398	1/1:15,11:26:36.11:518,36,0	1/1:13,0:21:8.23:63,8,0	0/1:15,5:21:25.40:319,0,25	1/1:13,7:20:24.03:319,24,0	1/1:20,5:25:8.84:367,9,0	0/0:24,0:24:7.27:0,7,99	0/0:14,0:24:1.55:0,2,4	0/0:20,0:20:2.50:0,2,26	1/1:12,16:28:30.10:447,30,0	0/0:10,0:17:15.35:0,15,262	0/0:17,0:18:15.02:0,15,212	1/1:9,16:25:39.13:596,39,0	0/0:14,0:25:27.86:0,28,329	0/1:20,0:39:3.70:4,0,649	0/0:7,0:11:12.04:0,12,191
chr10	40802075	.	T	TAGAC	1693.57	PASS	AB=1.000;AC=8;AF=0.143;AN=56;BaseQRankSum=5.424;DP=666;FS=0.507;HRun=0;HaplotypeScore=163.2241;InbreedingCoeff=0.1016;MQ=56.65;MQ0=6;MQRankSum=1.940;QD=10.45;ReadPosRankSum=0.473;VQSLOD=2.8363;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:74.25:0,74,830	0/0:12,0:12:36.02:0,36,443	0/0:20,0:14:23.09:0,23,225	0/0:16,0:9:26.96:0,27,255	0/0:20,0:19:41.60:0,42,411	0/0:27,0:27:62.99:0,63,660	0/0:23,0:23:59.99:0,60,653	0/0:52,0:51:99:0,123,1084	0/1:18,0:18:73.17:156,0,73	0/0:25,0:25:63.07:0,63,625	0/0:17,0:16:29.98:0,30,264	0/1:19,0:19:99:221,0,202	1/1:16,5:20:23.43:680,23,0	0/0:29,0:29:68.62:0,69,616	0/0:18,0:18:32.85:0,33,277	0/0:27,0:27:37.96:0,38,563	0/0:28,0:28:65.82:0,66,592	0/0:23,0:23:60.76:0,61,566	0/0:19,0:19:26.82:0,27,370	0/0:19,0:19:1.83:0,2,227	0/0:17,0:17:22.44:0,22,195	0/0:26,0:26:56.88:0,57,580	0/1:15,0:15:80.92:195,0,81	0/1:20,0:20:99:122,0,263	0/0:31,0:31:84.04:0,84,876	0/1:30,0:30:15.41:15,0,557	0/1:39,0:39:99:444,0,368	0/0:19,0:19:14.57:0,15,308
chr10	40802099	.	T	TAGAC	7182.98	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-5.873;DP=697;FS=2.474;HRun=0;HaplotypeScore=132.8875;InbreedingCoeff=0.9998;MQ=66.15;MQ0=1;MQRankSum=-2.464;QD=45.46;ReadPosRankSum=4.482;VQSLOD=5.5188;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:68.80:0,69,1207	0/0:13,0:13:30.10:0,30,521	0/0:27,0:25:57.12:0,57,897	0/0:24,0:21:47.14:0,47,651	1/1:3,20:24:39.13:994,39,0	0/0:23,0:23:66.21:0,66,1123	0/0:17,0:17:45.15:0,45,783	0/0:42,0:42:96.28:0,96,1532	1/1:6,24:31:45.15:1142,45,0	0/0:27,0:27:69.22:0,69,1136	0/0:19,0:19:45.13:0,45,724	0/0:26,0:26:69.24:0,69,1186	1/1:7,15:23:39.13:993,39,0	1/1:8,20:28:48.16:1224,48,0	0/0:22,0:22:51.17:0,51,874	1/1:5,20:25:57.20:1453,57,0	1/1:6,20:26:54.18:1377,54,0	0/0:20,0:20:54.18:0,54,923	0/0:22,0:22:57.17:0,57,910	0/0:22,0:22:63.15:0,63,994	0/0:17,0:17:38.76:0,39,677	0/0:29,0:29:69.19:0,69,1110	0/0:19,0:19:41.90:0,42,701	0/0:22,0:22:57.18:0,57,957	0/0:31,0:31:81.26:0,81,1369	0/0:31,0:31:84.28:0,84,1442	0/0:34,0:34:69.21:0,69,1179	0/0:22,0:22:54.14:0,54,878
chr10	40804009	.	G	GA	6399.01	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=7.813;DP=721;FS=3.268;HRun=6;HaplotypeScore=81.0439;InbreedingCoeff=0.9992;MQ=73.08;MQ0=0;MQRankSum=-0.930;QD=30.62;ReadPosRankSum=3.329;VQSLOD=5.3963;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,130,1275	0/0:9,0:9:27.06:0,27,275	0/0:20,0:20:48.05:0,48,469	0/0:15,0:15:36.06:0,36,358	1/1:3,25:28:66.10:792,66,0	1/1:1,16:16:42.13:528,42,0	1/1:2,27:29:66.21:830,66,0	0/0:26,0:26:57.11:0,57,576	1/1:2,32:34:87.25:1078,87,0	0/0:23,0:23:51.09:0,51,514	0/0:13,0:13:33.05:0,33,327	0/0:32,0:32:87.16:0,87,873	1/1:3,25:28:63.20:792,63,0	1/1:3,29:32:78.25:981,78,0	0/0:28,0:28:69.15:0,69,704	1/1:0,20:20:54.17:679,54,0	1/1:1,20:21:57.18:717,57,0	0/0:23,1:24:22.31:0,22,515	0/0:19,0:19:50.39:0,50,471	0/0:21,0:21:56.91:0,57,563	0/0:54,0:54:99:0,136,1360	0/0:20,0:20:48.09:0,48,484	0/0:18,0:18:45.10:0,45,458	0/0:48,0:48:99:0,132,1346	0/0:19,0:19:42.93:0,43,415	0/0:26,0:26:66.12:0,66,661	0/0:26,0:26:78.16:0,78,788	0/0:16,0:16:48.11:0,48,489
chr10	40807465	.	TTTTTTCC	T	1219.86	PASS	AB=0.974;AC=12;AF=0.240;AN=50;BaseQRankSum=3.521;DP=330;FS=6.170;HRun=0;HaplotypeScore=74.7740;InbreedingCoeff=-0.3533;MQ=49.77;MQ0=22;MQRankSum=-3.302;QD=7.30;ReadPosRankSum=-4.939;VQSLOD=-0.4249;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:15,0:11:99:108,0,268	./.	0/0:19,0:10:24.08:0,24,463	0/0:14,0:7:15.04:0,15,332	0/1:25,0:20:99:109,0,923	0/0:13,0:12:36.12:0,36,925	0/0:15,0:10:30.06:0,30,655	0/1:21,0:16:99:285,0,411	./.	0/1:6,5:8:99:166,0,233	0/1:12,0:10:99:188,0,441	0/0:17,0:17:48.16:0,48,1700	./.	0/0:14,0:13:0.13:0,0,749	0/1:11,0:8:87.74:88,0,369	0/0:14,0:12:36.12:0,36,906	0/0:18,0:17:33.09:0,33,684	0/1:13,0:9:41.59:42,0,307	0/1:13,0:12:99:251,0,486	0/1:11,0:11:61.82:62,0,508	0/0:2,0:1:3.01:0,3,43	0/0:4,0:4:12:0,12,265	0/0:8,0:8:15.05:0,15,468	0/0:19,0:17:48.16:0,48,1527	0/1:6,0:4:42.87:43,0,167	0/1:17,0:15:11.01:11,0,1012	0/1:12,0:12:7.30:7,0,609	0/0:4,0:2:3.01:0,3,77
chr10	40807673	.	GGT	G	564.65	PASS	AC=34;AF=1.000;AN=34;DP=372;FS=0.000;HRun=0;HaplotypeScore=54.5002;InbreedingCoeff=-0.0009;MQ=50.50;MQ0=23;QD=2.61;VQSLOD=1.2073;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:14:0.89:2,1,0	1/1:7,1:6:3:32,3,0	./.	./.	1/1:13,6:18:5.97:51,6,0	./.	1/1:10,0:14:2.84:14,3,0	./.	1/1:12,0:11:2.84:14,3,0	./.	1/1:8,0:11:2.84:14,3,0	1/1:8,4:12:3:32,3,0	1/1:11,0:12:2.84:14,3,0	1/1:9,1:10:5.97:52,6,0	1/1:6,0:6:2.92:17,3,0	1/1:9,3:11:6.02:63,6,0	1/1:7,2:9:9.02:95,9,0	1/1:16,0:23:17.21:101,17,0	./.	./.	./.	./.	1/1:13,0:13:3.01:32,3,0	1/1:14,1:15:6.49:63,6,0	1/1:12,0:10:5.68:28,6,0	1/1:9,0:9:2.84:14,3,0	./.	./.
chr10	40808176	.	A	AAG	2519.98	PASS	AB=0.984;AC=26;AF=0.464;AN=56;BaseQRankSum=8.701;DP=528;FS=38.628;HRun=0;HaplotypeScore=112.2319;InbreedingCoeff=0.0462;MQ=43.57;MQ0=13;MQRankSum=2.530;QD=6.65;ReadPosRankSum=2.142;VQSLOD=1.5761;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:27:64.83:221,0,65	0/1:9,0:11:34.09:34,0,73	0/0:20,0:10:23.05:0,23,221	0/0:9,0:4:5.23:0,5,75	0/1:23,0:23:60.79:61,0,122	0/0:18,0:17:35.35:0,35,299	0/0:24,0:25:18.99:0,19,298	0/1:23,0:20:81.49:81,0,107	0/0:13,0:13:5.85:0,6,72	1/1:8,1:19:9.86:236,10,0	1/1:5,6:11:5.03:150,5,0	0/0:17,0:17:38.75:0,39,328	0/0:18,0:18:21.41:0,21,106	0/1:12,0:11:20.95:21,0,59	1/1:11,0:13:13.63:82,14,0	0/1:16,0:14:34.46:98,0,34	0/1:32,0:28:56.50:126,0,56	1/1:7,6:14:22:321,22,0	0/1:21,0:16:63.35:63,0,89	0/1:17,0:15:85.04:104,0,85	1/1:9,0:9:4.15:126,4,0	1/1:14,0:14:13.21:208,13,0	0/0:16,0:15:35.62:0,36,282	0/0:13,0:13:22.94:0,23,207	1/1:9,6:21:9.65:230,10,0	0/1:39,0:39:99:306,0,125	0/1:29,0:26:63.45:127,0,63	0/1:26,0:24:99:108,0,153
chr10	40808180	.	GA	G	262.58	PASS	AB=0.644;AC=4;AF=0.071;AN=56;BaseQRankSum=-0.723;DP=522;FS=20.458;HRun=20;HaplotypeScore=110.3666;InbreedingCoeff=0.4902;MQ=45.45;MQ0=11;MQRankSum=-3.315;QD=5.97;ReadPosRankSum=-0.401;VQSLOD=0.8548;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:27:52.75:0,53,439	1/1:11,1:12:19.14:167,19,0	0/0:22,0:11:17.98:0,18,320	0/0:9,0:4:12.04:0,12,158	0/0:24,0:24:39:0,39,297	0/0:16,0:15:40.29:0,40,460	0/0:26,0:26:52.20:0,52,564	0/0:24,0:21:30.94:0,31,219	0/1:7,7:14:17.85:94,0,18	0/0:19,0:19:3.79:0,4,199	0/0:10,0:10:26.88:0,27,214	0/0:17,0:17:36.63:0,37,446	0/1:7,11:18:3.48:115,0,3	0/0:12,0:11:8.64:0,9,46	0/0:9,0:9:16.40:0,16,151	0/0:17,0:15:23.75:0,24,209	0/0:32,0:28:30.69:0,31,290	0/0:13,0:13:11.69:0,12,191	0/0:21,0:16:23.14:0,23,180	0/0:18,0:16:29.61:0,30,213	0/0:13,0:13:32.96:0,33,311	0/0:14,0:14:30.43:0,30,253	0/0:14,0:13:30.03:0,30,340	0/0:12,0:12:25.36:0,25,294	0/0:14,0:14:23.93:0,24,207	0/0:38,0:38:91.21:0,91,641	0/0:27,0:25:36.81:0,37,325	0/0:28,0:27:58.29:0,58,440
chr10	40808183	.	A	AGAAC	6356.06	PASS	AB=0.969;AC=28;AF=0.500;AN=56;BaseQRankSum=-1.362;DP=529;FS=4.861;HRun=0;HaplotypeScore=138.6428;InbreedingCoeff=0.2316;MQ=46.30;MQ0=11;MQRankSum=3.497;QD=16.64;ReadPosRankSum=2.975;VQSLOD=4.5190;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:27:32.35:520,0,32	0/0:9,0:9:10.79:0,11,83	0/0:24,0:11:29.84:0,30,486	0/0:14,0:4:12.03:0,12,196	0/1:23,0:23:41.07:255,0,41	0/0:15,0:14:40.61:0,41,618	0/0:25,0:25:53.89:0,54,770	0/1:26,0:23:92.97:304,0,93	0/1:15,0:15:2.18:2,0,94	1/1:16,0:17:29.12:429,29,0	1/1:14,0:14:6.59:289,7,0	0/0:16,0:16:36.98:0,37,521	0/0:18,0:18:0.67:0,1,124	0/1:7,4:10:37.77:71,0,38	1/1:7,0:7:12.92:82,13,0	1/1:19,0:17:17.30:350,17,0	1/1:32,0:28:5.92:432,6,0	1/1:11,0:11:26.93:321,27,0	0/1:22,0:18:90.33:266,0,90	0/1:19,0:17:83.23:266,0,83	1/1:13,0:13:15.96:302,16,0	1/1:14,0:14:12.50:437,13,0	0/0:14,0:13:33.03:0,33,437	0/0:12,0:12:24.43:0,24,388	1/1:13,0:14:24.05:319,24,0	0/1:39,0:38:35.10:917,0,35	0/1:29,0:27:25.70:347,0,26	0/1:27,0:26:93.24:447,0,93
chr10	40809083	.	CTTTG	C	2839.22	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=10.557;DP=693;FS=2.428;HRun=0;HaplotypeScore=127.9151;InbreedingCoeff=0.9936;MQ=68.26;MQ0=0;MQRankSum=-2.869;QD=48.12;ReadPosRankSum=1.112;VQSLOD=4.2041;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:96.32:0,96,2536	1/1:1,6:7:14.68:284,15,0	0/0:23,0:22:50.21:0,50,1424	0/0:15,0:15:39.13:0,39,984	0/0:33,0:33:96.30:0,96,2478	0/0:25,0:25:66.23:0,66,1739	0/0:24,0:24:72.23:0,72,1888	0/0:30,0:30:78.26:0,78,2043	1/1:0,30:30:81.28:1537,81,0	0/0:23,0:23:66.23:0,66,1770	0/0:20,0:20:57.20:0,57,1537	0/0:19,0:19:57.20:0,57,1521	1/1:1,21:22:63.17:1159,63,0	0/0:20,0:20:60.21:0,60,1619	0/0:28,0:28:84.29:0,84,2261	0/0:37,0:37:99:0,108,2883	0/0:26,0:26:72.25:0,72,1941	0/0:10,0:11:30.57:0,31,767	0/0:21,0:21:57.20:0,57,1500	0/0:22,0:22:60.19:0,60,1564	0/0:36,0:36:99:0,108,2916	0/0:26,0:26:72.25:0,72,1941	0/0:28,0:28:84.26:0,84,2154	0/0:30,0:30:81.28:0,81,2187	0/0:15,0:15:42.14:0,42,1115	0/0:42,0:42:99:0,123,3212	0/0:27,0:27:78.27:0,78,2096	0/0:19,0:19:57.20:0,57,1502
chr10	40809217	.	CACACACAGACACACAGACACACAGACACACAGACACACAG	C	890.80	PASS	AB=1.000;AC=28;AF=0.583;AN=48;BaseQRankSum=-0.891;DP=636;FS=3.660;HRun=0;HaplotypeScore=549.6199;InbreedingCoeff=0.4177;MQ=62.54;MQ0=11;MQRankSum=2.888;QD=2.92;ReadPosRankSum=3.014;VQSLOD=-0.2517;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:31,0:31:3:25,3,0	./.	0/0:41,0:30:6.02:0,6,109	0/0:34,0:28:9.50:0,10,196	./.	0/0:23,0:23:19:0,19,2167	0/0:41,0:40:48.11:0,48,4028	1/1:26,0:25:3.01:71,3,0	1/1:29,0:28:3:25,3,0	1/1:20,0:18:2.97:21,3,0	1/1:4,0:4:3.01:78,3,0	0/0:29,0:29:57.18:0,57,6120	1/1:10,0:10:3.01:65,3,0	1/1:17,0:17:3.01:61,3,0	./.	1/1:19,0:18:3.01:118,3,0	0/1:32,0:32:39.18:101,0,39	1/1:18,0:18:3.01:38,3,0	0/0:21,0:20:2.37:0,2,8	./.	1/1:32,0:32:3.01:64,3,0	0/0:14,7:21:0.47:0,0,1	0/0:15,0:15:18.05:0,18,1864	0/0:49,0:49:99:0,108,16078	1/1:18,0:18:3.01:70,3,0	1/1:23,0:23:6.02:143,6,0	1/1:19,0:19:9.03:147,9,0	0/1:7,0:7:16.98:17,0,288
chr10	40809253	.	C	CG	539.46	PASS	AB=0.972;AC=24;AF=0.462;AN=52;BaseQRankSum=8.246;DP=361;FS=1.339;HRun=0;HaplotypeScore=121.3106;InbreedingCoeff=0.0706;MQ=50.08;MQ0=19;MQRankSum=-3.594;QD=3.46;ReadPosRankSum=-3.266;VQSLOD=2.8364;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:10,0:10:21.81:22,0,24	1/1:3,0:3:7.59:31,8,0	0/0:8,0:3:9.03:0,9,125	0/0:11,0:6:13.28:0,13,155	./.	0/0:24,0:22:48.16:0,48,671	0/0:52,0:51:99:0,104,1363	0/1:6,0:5:31.91:35,0,32	1/1:5,0:4:8.17:45,8,0	0/1:13,0:10:9.04:9,0,57	1/1:3,1:4:3:29,3,0	0/0:30,0:30:84.27:0,84,1154	1/1:8,0:8:14.83:86,15,0	0/1:7,0:7:19.40:36,0,19	1/1:10,0:10:4.13:11,4,0	0/1:14,0:13:2.64:52,0,3	0/1:13,6:19:52.24:64,0,52	0/1:6,0:6:2.50:35,0,3	0/0:3,0:3:2.43:0,2,18	0/1:5,0:4:1.57:2,0,12	0/1:17,0:15:9.82:10,0,67	./.	0/0:15,0:15:42.13:0,42,569	0/0:51,0:51:99:0,147,2056	0/1:6,0:5:10.92:19,0,11	0/1:8,1:9:27.91:76,0,28	1/1:8,0:8:11.74:131,12,0	0/1:6,0:5:13.34:13,0,42
chr10	40809686	.	GACACAC	G	1270.57	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=4.363;DP=556;FS=0.000;HRun=0;HaplotypeScore=149.0947;InbreedingCoeff=0.6348;MQ=60.63;MQ0=6;MQRankSum=-5.814;QD=27.62;ReadPosRankSum=2.602;VQSLOD=3.4315;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:23:11.98:0,12,289	0/0:1,0:9:20.95:0,21,165	0/0:27,0:21:17.80:0,18,338	0/0:23,0:15:12.03:0,12,266	0/0:10,0:10:18.06:0,18,402	0/0:9,0:18:18.03:0,18,407	0/0:13,0:28:48.16:0,48,1195	0/0:22,0:20:36.09:0,36,759	1/1:12,12:24:36.08:699,36,0	0/0:23,0:23:45.13:0,45,1002	0/0:10,0:10:6.02:0,6,147	0/0:27,0:30:75.26:0,75,2219	1/1:9,13:22:33.11:692,33,0	0/0:18,0:18:18.06:0,18,466	0/0:26,0:28:6.49:0,6,119	0/0:20,0:20:15.03:0,15,347	0/0:21,0:21:9.03:0,9,166	0/0:17,0:17:21.07:0,21,485	0/0:19,0:17:24.04:0,24,520	0/0:9,0:9:3.01:0,3,68	0/0:24,0:22:3.01:0,3,68	0/0:15,0:15:6.02:0,6,163	0/0:16,0:17:33.11:0,33,1001	0/0:30,0:33:53.43:0,53,1640	0/0:15,0:16:3.48:0,3,79	0/0:17,0:16:42.10:0,42,964	0/0:22,0:21:23.72:0,24,504	0/0:8,0:8:15.05:0,15,356
chr10	40809715	.	A	ACACACACACACC	7172.97	PASS	AB=1.000;AC=20;AF=0.357;AN=56;BaseQRankSum=4.883;DP=597;FS=6.618;HRun=0;HaplotypeScore=218.4061;InbreedingCoeff=0.0497;MQ=58.96;MQ0=8;MQRankSum=-6.928;QD=20.44;ReadPosRankSum=-1.024;VQSLOD=2.8640;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:35,0:35:99:289,0,276	0/0:9,0:9:23.96:0,24,690	0/0:23,0:14:39.05:0,39,555	0/0:22,0:14:37.13:0,37,383	1/1:3,9:18:23.86:418,24,0	0/0:17,0:17:19.89:0,20,204	0/0:21,0:21:39.34:0,39,274	0/1:26,0:24:99:598,0,257	0/0:22,0:22:59.50:0,60,877	0/1:22,0:22:99:510,0,177	0/0:14,0:14:14.95:0,15,119	0/0:30,0:30:68.21:0,68,2327	0/0:17,0:17:39.11:0,39,1021	1/1:9,12:29:30.57:1398,31,0	0/1:32,0:31:99:377,0,180	1/1:6,19:28:16.78:593,17,0	1/1:4,0:22:9.50:502,10,0	0/1:18,0:18:99:546,0,176	0/1:26,0:24:99:337,0,276	0/1:9,0:9:31.91:53,0,32	0/0:28,0:26:14.10:0,14,260	0/1:15,0:15:25.28:25,0,57	0/0:17,0:17:41.56:0,42,1002	0/0:26,0:25:65.77:0,66,1787	0/1:18,0:18:76.32:124,0,76	0/1:24,0:23:99:676,0,247	0/1:22,0:22:99:450,0,232	0/1:6,0:6:40.89:277,0,41
chr10	40809940	.	TG	T	6931.19	PASS	AB=1.000;AC=43;AF=0.768;AN=56;BaseQRankSum=-1.416;DP=438;FS=11.454;HRun=9;HaplotypeScore=52.7564;InbreedingCoeff=0.8684;MQ=73.38;MQ0=0;MQRankSum=-2.213;QD=20.57;ReadPosRankSum=-0.222;VQSLOD=4.5955;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,23:28:51.01:467,51,0	1/1:1,1:2:3:27,3,0	0/1:12,0:12:7.71:8,0,115	0/0:13,0:12:13.42:0,13,147	1/1:1,9:10:30.02:274,30,0	1/1:1,12:13:33.02:302,33,0	1/1:4,15:19:45.02:412,45,0	1/1:5,15:20:42:380,42,0	0/0:6,0:19:40.09:0,40,233	1/1:4,8:12:26.99:242,27,0	1/1:2,7:9:18.01:164,18,0	0/0:17,0:17:45.12:0,45,509	0/0:4,0:19:39.68:0,40,202	1/1:3,10:13:17.20:297,17,0	1/1:0,16:16:42.01:384,42,0	1/1:1,13:14:36.02:330,36,0	1/1:3,19:22:60.03:549,60,0	1/1:0,4:4:12.01:110,12,0	1/1:6,16:22:47.99:433,48,0	1/1:4,7:11:21.01:192,21,0	1/1:2,34:36:84.04:769,84,0	1/1:2,12:14:30.01:275,30,0	0/0:13,0:13:30.09:0,30,343	0/0:20,0:20:45.10:0,45,505	1/1:4,9:13:24.01:220,24,0	1/1:1,13:14:39.02:357,39,0	1/1:3,21:24:60.02:549,60,0	1/1:2,7:9:21.01:192,21,0
chr10	40810388	.	TC	T	4145.45	PASS	AB=0.931;AC=27;AF=0.482;AN=56;BaseQRankSum=7.201;DP=520;FS=0.762;HRun=10;HaplotypeScore=66.7441;InbreedingCoeff=0.7745;MQ=76.83;MQ0=0;MQRankSum=0.371;QD=13.82;ReadPosRankSum=1.679;VQSLOD=3.7817;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,27:35:62.98:547,63,0	1/1:6,0:6:8.88:27,9,0	0/0:11,0:11:9.16:0,9,93	0/1:23,1:24:45.07:45,0,197	0/0:17,2:19:16.06:0,16,402	0/0:6,0:10:6.57:0,7,39	0/0:16,0:27:35.36:0,35,185	1/1:6,13:19:35.97:308,36,0	1/1:19,0:19:49.58:289,50,0	0/1:18,1:19:6.69:7,0,386	0/1:19,3:22:0.86:1,0,467	0/0:23,0:23:66.10:0,66,703	1/1:21,0:21:46.83:284,47,0	0/0:18,2:20:28.17:0,28,520	0/0:19,0:19:45.11:0,45,490	0/0:10,0:10:21.06:0,21,232	0/0:20,0:20:51.14:0,51,564	0/0:14,0:14:32.99:0,33,337	1/1:6,15:22:41:345,41,0	1/1:2,16:18:41.98:364,42,0	1/1:5,22:27:59.97:521,60,0	1/1:5,15:20:38.98:338,39,0	0/0:11,1:12:4.03:0,4,272	0/0:19,0:19:48.11:0,48,521	0/0:15,1:16:15.95:0,16,363	1/1:3,17:20:29.51:418,30,0	1/1:0,22:22:59.99:521,60,0	1/1:0,5:5:15:130,15,0
chr10	40810641	.	GT	G	9546.22	PASS	AB=0.970;AC=47;AF=0.839;AN=56;BaseQRankSum=2.781;DP=625;FS=17.384;HRun=10;HaplotypeScore=68.9306;InbreedingCoeff=0.8250;MQ=70.99;MQ0=2;MQRankSum=0.717;QD=17.98;ReadPosRankSum=5.186;VQSLOD=3.8400;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,34:46:28.47:695,28,0	1/1:4,6:10:17.99:156,18,0	0/0:25,0:16:27:0,27,267	0/1:31,1:25:18.56:19,0,233	1/1:7,32:39:12.46:718,12,0	1/1:4,22:26:56.98:495,57,0	1/1:3,15:18:35.98:313,36,0	1/1:11,26:37:59.95:638,60,0	1/1:3,26:29:74.98:651,75,0	1/1:1,16:17:47.93:406,48,0	1/1:2,17:19:50.99:442,51,0	0/0:22,1:23:34.02:0,34,578	1/1:2,14:16:29.92:260,30,0	1/1:2,15:17:22.20:319,22,0	1/1:3,17:20:44.99:391,45,0	1/1:0,23:23:68.99:599,69,0	1/1:3,21:24:47.99:417,48,0	1/1:5,8:13:4.48:163,4,0	1/1:10,15:25:14.78:357,15,0	1/1:2,11:13:26.98:234,27,0	1/1:1,23:24:53.98:469,54,0	1/1:2,17:19:44.98:390,45,0	0/0:19,1:20:30.90:0,31,532	0/0:26,0:26:63.17:0,63,696	1/1:2,13:15:38.99:339,39,0	1/1:3,16:19:47.94:407,48,0	1/1:2,17:19:47.93:417,48,0	1/1:1,10:11:25.77:254,26,0
chr10	40810896	.	C	CGGGATGAGAAGGG	4508.72	PASS	AB=0.743;AC=3;AF=0.054;AN=56;BaseQRankSum=-0.409;DP=521;FS=0.738;HRun=0;HaplotypeScore=189.8341;InbreedingCoeff=0.6294;MQ=80.29;MQ0=0;MQRankSum=-8.011;QD=95.93;ReadPosRankSum=-0.576;VQSLOD=4.6985;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:42.14:0,42,1452	0/0:5,0:5:12.04:0,12,451	0/0:21,0:21:41.70:0,42,958	0/0:12,0:12:21.06:0,21,519	0/0:22,0:22:51.14:0,51,1650	0/0:15,0:15:38.79:0,39,1348	0/0:18,0:18:51.18:0,51,1838	0/0:20,0:20:39.13:0,39,1210	1/1:14,6:21:27.09:1583,27,0	0/0:18,0:18:45.15:0,45,1644	0/0:14,0:14:33.10:0,33,1059	0/0:23,0:23:51.18:0,51,1852	0/1:17,9:26:58.57:2926,0,59	0/0:19,0:19:51.17:0,51,1788	0/0:17,0:17:45.15:0,45,1605	0/0:10,0:10:27.09:0,27,913	0/0:33,0:33:78.24:0,78,2632	0/0:24,0:23:60.20:0,60,1972	0/0:11,0:11:27.09:0,27,995	0/0:15,0:15:36.12:0,36,1219	0/0:25,0:25:48.16:0,48,1668	0/0:23,0:23:60.20:0,60,1980	0/0:17,0:17:42.13:0,42,1365	0/0:35,0:35:66.21:0,66,2149	0/0:19,0:19:39.13:0,39,1321	0/0:14,0:14:42.14:0,42,1393	0/0:13,0:13:36.12:0,36,1288	0/0:9,0:9:27.09:0,27,956
chr10	40811332	.	G	GA	4894.56	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-5.208;DP=722;FS=3.328;HRun=1;HaplotypeScore=120.0606;InbreedingCoeff=0.9977;MQ=83.33;MQ0=0;MQRankSum=-3.196;QD=38.85;ReadPosRankSum=3.867;VQSLOD=4.5986;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,135,1699	0/0:7,0:7:18.06:0,18,234	0/0:37,0:36:99:0,100,1248	0/0:27,0:27:78.24:0,78,984	1/1:0,29:29:78.26:1168,78,0	0/0:28,0:28:78.25:0,78,1013	0/0:25,0:25:75.24:0,75,973	0/0:23,0:23:66.21:0,66,857	0/0:35,0:35:99:0,102,1309	0/0:25,0:25:75.24:0,75,963	0/0:18,0:18:54.18:0,54,701	0/0:24,0:24:69.22:0,69,894	0/0:23,0:23:69.20:0,69,875	1/1:2,23:25:66.22:989,66,0	0/0:26,0:26:75.24:0,75,974	1/1:1,30:32:81.27:1208,81,0	1/1:2,38:40:99:1529,102,0	0/0:25,0:25:75.24:0,75,971	0/0:24,0:24:72.23:0,72,933	0/0:27,0:27:81.26:0,81,1052	0/0:25,0:25:69.22:0,69,896	0/0:16,0:16:48.15:0,48,610	0/0:23,0:23:66.21:0,66,857	0/0:43,0:43:99:0,129,1658	0/0:17,0:17:45.12:0,45,568	0/0:20,0:20:60.20:0,60,779	0/0:14,0:14:42.12:0,42,531	0/0:15,0:15:45.15:0,45,584
chr10	40811619	.	AAC	A	3825.28	PASS	AC=14;AF=0.259;AN=54;BaseQRankSum=13.679;DP=567;FS=3.077;HRun=0;HaplotypeScore=106.9060;InbreedingCoeff=0.9807;MQ=82.06;MQ0=0;MQRankSum=-0.638;QD=32.69;ReadPosRankSum=3.961;VQSLOD=6.0846;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,138,2393	1/1:0,3:3:9.03:123,9,0	0/0:14,0:14:39.13:0,39,639	0/0:21,0:21:51.07:0,51,802	1/1:3,11:14:18.53:248,19,0	0/0:20,0:20:60.21:0,60,1050	0/0:25,0:25:63.22:0,63,1113	0/0:36,0:36:99:0,103,1770	1/1:0,20:20:60.20:824,60,0	0/0:14,0:14:39.13:0,39,664	./.	0/0:21,0:21:57.20:0,57,1011	1/1:3,12:15:30.10:412,30,0	1/1:2,14:16:36.12:493,36,0	0/0:17,0:17:48.15:0,48,807	1/1:1,19:20:54.18:736,54,0	1/1:1,28:29:72.24:989,72,0	0/0:36,0:36:99:0,102,1791	0/0:29,0:29:84.28:0,84,1461	0/0:5,0:5:15.05:0,15,266	0/0:71,0:71:99:0,208,3655	0/0:6,0:6:15.04:0,15,237	0/0:10,0:10:30.10:0,30,523	0/0:25,0:25:72.25:0,72,1274	0/0:9,0:9:24.08:0,24,426	0/0:15,0:15:42.14:0,42,745	0/0:19,0:19:57.20:0,57,1011	0/0:7,0:7:21.07:0,21,357
chr10	40811741	.	CCG	C	1906.95	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=11.861;DP=462;FS=8.103;HRun=0;HaplotypeScore=71.7807;InbreedingCoeff=0.9378;MQ=87.31;MQ0=0;MQRankSum=-4.257;QD=27.64;ReadPosRankSum=3.319;VQSLOD=4.9150;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,114,2274	0/0:6,0:6:18.06:0,18,364	0/0:19,0:19:54.14:0,54,1013	0/0:16,0:16:41.93:0,42,864	1/1:0,12:12:18.77:222,19,0	0/0:15,0:15:45.13:0,45,859	0/0:19,0:19:54.17:0,54,1059	0/0:36,0:36:99:0,108,2160	0/0:15,0:15:45.15:0,45,912	0/0:10,0:10:30.10:0,30,599	0/0:12,0:12:33.10:0,33,626	0/0:15,0:15:45.15:0,45,887	0/0:21,0:21:63.22:0,63,1256	1/1:3,10:13:33.10:399,33,0	0/0:9,0:9:24.08:0,24,487	1/1:1,14:14:39.12:471,39,0	1/1:2,27:29:81.24:974,81,0	0/0:22,0:22:66.23:0,66,1337	0/0:16,0:16:42.62:0,43,852	0/0:11,0:11:33.10:0,33,610	0/0:50,0:50:99:0,135,2608	0/0:4,0:4:12.04:0,12,240	0/0:6,0:6:18.06:0,18,365	0/0:16,0:16:48.15:0,48,916	0/0:12,0:12:33.11:0,33,653	0/0:10,0:10:30.08:0,30,539	0/0:10,0:10:30.10:0,30,608	0/0:2,0:2:3.01:0,3,60
chr10	40811744	.	AT	A	1350.98	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=11.862;DP=464;FS=10.992;HRun=2;HaplotypeScore=65.3623;InbreedingCoeff=0.9562;MQ=88.06;MQ0=0;MQRankSum=-3.618;QD=19.87;ReadPosRankSum=3.492;VQSLOD=2.5345;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,117,1706	0/0:6,0:6:18.06:0,18,266	0/0:21,0:21:57.19:0,57,833	0/0:16,0:16:42.01:0,42,593	1/1:1,12:13:22.93:211,23,0	0/0:15,0:15:45.12:0,45,634	0/0:18,0:18:51.15:0,51,724	0/0:39,0:39:99:0,114,1673	0/0:16,0:16:48.11:0,48,675	0/0:10,0:10:27.09:0,27,405	0/0:12,0:12:36.10:0,36,518	0/0:15,0:15:45.15:0,45,674	0/0:20,0:20:60.20:0,60,898	1/1:0,12:12:29.94:253,30,0	0/0:8,0:8:24.08:0,24,360	1/1:1,14:14:38.96:341,39,0	1/1:1,27:28:80.93:705,81,0	0/0:24,0:23:69.22:0,69,1003	0/0:16,0:16:45.14:0,45,654	0/0:10,0:10:27.08:0,27,385	0/0:50,0:50:99:0,138,1984	0/0:4,0:4:12.04:0,12,180	0/0:6,0:6:18.06:0,18,270	0/0:15,0:15:45.14:0,45,652	0/0:11,0:11:30.09:0,30,431	0/0:9,0:9:27.08:0,27,386	0/0:10,0:10:27.09:0,27,405	0/0:2,0:2:6.01:0,6,70
chr10	40811874	.	C	CATAT	1794.50	PASS	AB=0.917;AC=24;AF=0.667;AN=36;BaseQRankSum=2.743;DP=140;FS=2.968;HRun=0;HaplotypeScore=57.1984;InbreedingCoeff=0.3952;MQ=48.29;MQ0=4;MQRankSum=-1.327;QD=17.94;ReadPosRankSum=-3.644;VQSLOD=2.5404;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,0:5:6.02:95,6,0	./.	0/0:7,0:2:2.95:0,3,48	0/1:11,0:6:0.07:0,0,0	./.	1/1:0,5:8:2.88:15,3,0	./.	0/1:4,0:19:36.54:329,0,37	./.	1/1:2,5:7:17.96:408,18,0	./.	0/0:6,0:6:18.06:0,18,359	./.	./.	1/1:0,3:3:3.01:81,3,0	1/1:4,0:5:7.84:138,8,0	1/1:8,0:11:12.02:179,12,0	1/1:8,4:12:30.08:503,30,0	1/1:2,0:2:5.95:59,6,0	./.	./.	./.	0/0:3,0:3:9.03:0,9,170	0/0:2,0:2:6.02:0,6,120	0/1:3,1:3:0:0,0,0	1/1:2,0:2:6:61,6,0	1/1:1,0:1:2.94:18,3,0	0/1:4,0:3:8.57:33,0,9
chr10	40811890	.	TAC	T	63.36	PASS	AB=0.885;AC=12;AF=0.353;AN=34;BaseQRankSum=2.726;DP=120;FS=1.523;HRun=0;HaplotypeScore=69.7768;InbreedingCoeff=0.3602;MQ=39.57;MQ0=4;MQRankSum=-2.605;QD=1.55;ReadPosRankSum=0.333;VQSLOD=1.6417;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:7,0:2:2.99:0,3,23	./.	0/1:9,0:8:0:0,0,0	1/1:5,0:5:2.22:7,2,0	0/0:2,0:2:0:0,0,0	0/0:21,0:17:25.27:0,25,277	./.	1/1:1,4:4:8.97:80,9,0	./.	0/0:6,0:6:18.06:0,18,347	./.	./.	1/1:1,2:3:2.92:17,3,0	1/1:8,0:7:2.50:9,2,0	0/0:9,0:9:0.38:0,0,27	0/1:7,3:10:47.48:47,0,70	1/1:1,0:1:2.37:8,2,0	./.	./.	./.	0/0:3,0:3:9.03:0,9,174	0/0:2,0:2:6.02:0,6,116	0/0:0,3:2:0:0,0,0	0/0:1,0:1:2.97:0,3,20	./.	0/0:4,0:3:2.68:0,3,11
chr10	40811902	.	TACACACACAC	T	83.33	PASS	AB=0.931;AC=7;AF=0.250;AN=28;BaseQRankSum=3.162;DP=102;FS=1.703;HRun=0;HaplotypeScore=81.1149;InbreedingCoeff=0.2481;MQ=32.75;MQ0=4;MQRankSum=-2.652;QD=2.31;ReadPosRankSum=1.434;VQSLOD=1.1249;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	0/1:8,0:8:0:0,0,0	0/0:4,0:4:2.60:0,3,10	0/0:1,0:1:3.01:0,3,68	0/0:13,0:8:14.25:0,14,167	./.	0/0:3,2:4:0.45:0,0,1	./.	0/0:6,0:6:18.06:0,18,702	./.	./.	./.	1/1:6,0:7:2.97:11,3,0	0/1:6,0:7:10.39:11,0,10	0/1:10,1:11:96.04:142,0,96	1/1:2,0:2:2.37:8,2,0	./.	./.	./.	0/0:4,0:4:12.04:0,12,505	0/0:3,0:3:9.03:0,9,288	0/0:1,2:2:0.47:0,0,1	./.	./.	0/0:5,0:3:2.22:0,2,7
chr10	40811912	.	CATATATAT	C	177	PASS	AB=1.000;AC=5;AF=0.179;AN=28;BaseQRankSum=2.647;DP=96;FS=1.998;HRun=0;HaplotypeScore=64.2848;InbreedingCoeff=0.4763;MQ=42.19;MQ0=4;MQRankSum=-2.647;QD=11.80;ReadPosRankSum=1.194;VQSLOD=1.8201;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	0/0:11,0:2:0.47:0,0,1	./.	0/0:4,0:4:3.01:0,3,73	0/0:1,0:1:3.01:0,3,85	0/0:12,0:7:12.04:0,12,248	./.	0/1:3,0:2:0:0,0,0	./.	0/0:5,0:5:15.05:0,15,435	./.	./.	./.	1/1:3,4:7:6.02:119,6,0	1/1:1,2:4:9.02:150,9,0	0/0:11,0:11:16.46:0,16,371	0/0:2,0:2:3.01:0,3,30	./.	./.	./.	0/0:4,0:4:12.03:0,12,346	0/0:3,0:3:9.01:0,9,295	0/0:4,0:3:3.48:0,3,52	./.	./.	0/0:5,0:3:3.01:0,3,65
chr10	40811922	.	CATATAT	C	61.69	PASS	AC=6;AF=0.214;AN=28;BaseQRankSum=2.883;DP=105;FS=0.000;HRun=0;HaplotypeScore=54.1263;InbreedingCoeff=0.4041;MQ=49.31;MQ0=4;MQRankSum=-2.156;QD=4.75;ReadPosRankSum=0.420;VQSLOD=1.2383;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:1,0:1:3:0,3,25	./.	./.	0/0:13,0:2:0.47:0,0,1	./.	0/0:4,0:4:3.01:0,3,59	0/0:1,0:1:3.01:0,3,51	0/0:10,0:5:3.01:0,3,72	./.	./.	./.	0/0:11,0:11:20.57:0,21,400	./.	./.	./.	1/1:4,4:7:6.02:77,6,0	1/1:2,2:4:7.83:74,8,0	0/0:12,0:12:14.45:0,14,314	./.	./.	./.	./.	0/0:3,0:3:6.02:0,6,201	0/0:2,0:2:6.02:0,6,201	0/0:4,0:3:3.01:0,3,51	./.	1/1:1,0:1:0.47:1,0,0	0/0:5,0:3:3.01:0,3,76
chr10	40812158	.	C	CGCCACCACTGCCT	5946.14	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-2.546;DP=530;FS=4.277;HRun=0;HaplotypeScore=178.7360;InbreedingCoeff=0.9480;MQ=84.23;MQ0=0;MQRankSum=-9.173;QD=116.59;ReadPosRankSum=-0.218;VQSLOD=4.8925;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,117,4286	1/1:1,2:3:6.02:400,6,0	0/0:17,0:17:45.15:0,45,1675	0/0:26,0:26:70.98:0,71,2154	0/0:15,0:15:42.14:0,42,1717	0/0:22,0:22:63.20:0,63,2330	0/0:32,0:32:96.32:0,96,3486	0/0:22,0:22:63.21:0,63,2107	1/1:11,12:29:66.22:3820,66,0	0/0:18,0:18:54.11:0,54,1867	0/0:6,0:6:12.04:0,12,414	0/0:19,0:19:54.19:0,54,2173	1/1:5,6:19:30.10:1726,30,0	0/0:18,0:18:45.15:0,45,1780	0/0:17,0:17:48.15:0,48,1820	0/0:20,0:20:57.20:0,57,2287	0/0:37,0:37:99:0,105,3952	0/0:18,0:18:54.19:0,54,2042	0/0:11,0:11:33.11:0,33,1316	0/0:9,0:9:27.08:0,27,1007	0/0:33,0:33:93.30:0,93,3519	0/0:11,0:11:33.11:0,33,1274	0/0:10,0:10:27.08:0,27,907	0/0:30,0:30:81.23:0,81,2838	0/0:8,0:8:24.07:0,24,874	0/0:18,0:18:48.16:0,48,1694	0/0:13,0:13:33.11:0,33,1350	0/0:9,0:9:24.08:0,24,982
chr10	40816000	.	CT	C	2334.11	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=10.423;DP=624;FS=12.297;HRun=7;HaplotypeScore=63.5347;InbreedingCoeff=0.9962;MQ=78.34;MQ0=0;MQRankSum=-1.185;QD=26.52;ReadPosRankSum=1.129;VQSLOD=3.6203;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,153,1893	1/1:0,7:7:21.05:214,21,0	0/0:20,0:19:24.72:0,25,592	0/0:13,0:13:36.01:0,36,385	0/0:18,0:18:51.15:0,51,628	1/1:1,20:21:57.13:581,57,0	1/1:1,25:26:69.16:704,69,0	0/0:31,0:31:82.50:0,82,1012	1/1:0,19:19:57.13:582,57,0	0/0:23,0:23:60.19:0,60,754	0/0:9,0:9:24.07:0,24,291	0/0:30,0:30:81.25:0,81,998	1/1:0,15:15:42.09:428,42,0	0/0:18,0:18:48.15:0,48,604	0/0:27,0:27:69.18:0,69,829	0/0:21,0:21:36.98:0,37,694	0/0:34,0:33:93.30:0,93,1165	0/0:19,0:19:57.18:0,57,717	0/0:24,0:24:57.18:0,57,715	0/0:25,0:25:66.21:0,66,830	0/0:43,0:43:99:0,129,1595	0/0:19,0:19:42.13:0,42,528	0/0:17,0:17:48.12:0,48,569	0/0:31,0:31:90.20:0,90,1096	0/0:18,0:18:48.15:0,48,604	0/0:17,0:17:45.14:0,45,566	0/0:20,0:20:60.17:0,60,729	0/0:7,0:7:18.06:0,18,226
chr10	40816107	.	GGGC	G	3184.43	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=11.053;DP=551;FS=13.527;HRun=0;HaplotypeScore=82.3886;InbreedingCoeff=0.9913;MQ=80.21;MQ0=0;MQRankSum=-2.218;QD=31.22;ReadPosRankSum=2.095;VQSLOD=2.9948;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:96.30:0,96,2003	1/1:10,0:10:14.97:55,15,0	0/0:14,0:14:36.08:0,36,736	0/0:19,0:20:23.71:0,24,751	0/0:14,0:14:42.13:0,42,878	1/1:3,22:25:54.14:878,54,0	1/1:5,24:29:66.22:1087,66,0	0/0:18,0:18:47.89:0,48,928	1/1:2,15:17:42.10:675,42,0	0/0:11,0:11:33.11:0,33,727	0/0:12,0:12:36.12:0,36,743	0/0:28,0:28:84.27:0,84,1806	1/1:0,21:20:42.10:664,42,0	0/0:21,0:20:57.19:0,57,1242	0/0:28,0:28:81.26:0,81,1726	0/0:20,0:20:57.19:0,57,1242	0/0:36,0:36:99:0,102,2164	0/0:15,0:15:45.11:0,45,944	0/0:17,0:17:48.03:0,48,884	0/0:13,0:13:39.13:0,39,802	0/0:40,0:40:99:0,111,2293	0/0:11,0:11:33.11:0,33,713	0/0:8,0:8:24.07:0,24,475	0/0:29,0:29:87.30:0,87,1880	0/0:23,0:23:57.19:0,57,1234	0/0:20,0:20:57.17:0,57,1139	0/0:13,0:13:36.12:0,36,789	0/0:6,0:6:15.05:0,15,330
chr10	40816108	.	GGC	G	1547.92	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=12.591;DP=543;FS=13.459;HRun=0;HaplotypeScore=76.1339;InbreedingCoeff=0.9784;MQ=79.80;MQ0=0;MQRankSum=-2.828;QD=15.80;ReadPosRankSum=2.282;VQSLOD=2.6429;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:96.30:0,96,1634	1/1:0,10:10:18.06:272,18,0	0/0:14,0:14:36.08:0,36,605	0/0:19,0:19:8.34:0,8,585	0/0:14,0:14:42.13:0,42,719	1/1:25,0:24:53.57:385,54,0	1/1:27,0:27:65.44:468,65,0	0/0:18,0:18:47.89:0,48,757	1/1:15,0:15:41.66:299,42,0	0/0:11,0:11:33.11:0,33,592	0/0:12,0:12:36.09:0,36,585	0/0:28,0:28:84.27:0,84,1474	1/1:21,0:20:41.65:297,42,0	0/0:20,0:19:57.20:0,57,1007	0/0:27,0:27:81.26:0,81,1408	0/0:20,0:20:57.19:0,57,1008	0/0:36,0:36:99:0,105,1773	0/0:15,0:15:45.11:0,45,772	0/0:16,0:16:48.03:0,48,737	0/0:13,0:13:38.85:0,39,623	0/0:39,0:39:99:0,111,1851	0/0:11,0:11:33.11:0,33,573	0/0:8,0:8:24.07:0,24,389	0/0:29,0:29:87.25:0,87,1513	0/0:22,0:22:57.18:0,57,1006	0/0:21,0:21:57.16:0,57,942	0/0:14,0:14:39.11:0,39,665	0/0:6,0:6:15.05:0,15,268
chr10	40817553	.	C	CTGCTGAGCAACCACAG	61539.54	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=0.525;DP=763;FS=7.243;HRun=0;HaplotypeScore=308.4977;InbreedingCoeff=0.9975;MQ=75.33;MQ0=0;MQRankSum=-20.983;QD=149.37;ReadPosRankSum=-1.280;VQSLOD=3.2554;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:30,16:51:99:5945,108,0	0/0:11,0:11:30.10:0,30,1353	0/0:22,0:22:60.66:0,61,2212	0/0:21,0:21:54.19:0,54,1884	0/0:23,0:23:69.24:0,69,3062	0/0:26,0:26:75.26:0,75,3223	0/0:32,0:32:87.25:0,87,3492	1/1:41,0:41:99:6048,105,0	0/0:25,0:25:72.23:0,72,3031	1/1:19,11:35:99:6393,102,0	1/1:10,11:23:48.16:2973,48,0	0/0:30,0:30:84.29:0,84,3619	0/0:26,0:26:78.21:0,78,3138	0/0:19,0:19:54.17:0,54,2285	1/1:15,15:35:87.30:5702,87,0	0/0:26,0:26:75.26:0,75,3224	0/0:32,0:32:90.31:0,90,3907	1/1:8,5:15:36.12:2388,36,0	1/1:17,5:27:72.25:4318,72,0	1/1:17,14:35:84.29:5192,84,0	1/1:9,3:16:24.08:1243,24,0	1/1:18,15:35:90.31:5315,90,0	0/0:29,0:29:84.25:0,84,3512	0/0:29,0:29:87.28:0,87,3669	1/1:11,7:23:51.18:2890,51,0	1/1:18,14:34:90.29:5795,90,0	1/1:16,15:36:87.30:6341,87,0	1/1:4,1:6:15.05:996,15,0
chr10	40818572	.	GA	G	7874.28	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=9.021;DP=532;FS=3.290;HRun=10;HaplotypeScore=69.3761;InbreedingCoeff=0.9413;MQ=77.20;MQ0=0;MQRankSum=-1.435;QD=21.00;ReadPosRankSum=2.513;VQSLOD=6.0027;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,52:56:99:1172,135,0	0/0:7,0:7:21.06:0,21,232	0/0:19,0:19:8.04:0,8,258	0/0:11,0:11:18.01:0,18,183	1/1:0,17:18:47.02:397,47,0	0/0:20,0:22:56.82:0,57,592	0/0:27,0:27:75.18:0,75,813	1/1:5,12:17:32.99:287,33,0	0/0:12,0:13:32.92:0,33,345	1/1:5,19:24:4.86:391,5,0	1/1:2,16:18:47.99:417,48,0	0/0:12,0:12:33.08:0,33,358	0/0:13,0:13:33.07:0,33,355	1/1:3,23:26:33.73:515,34,0	1/1:2,23:25:68.97:599,69,0	1/1:1,17:18:17.81:384,18,0	1/1:5,24:29:8.62:533,9,0	1/1:0,18:18:53.99:469,54,0	1/1:5,17:23:53.02:449,53,0	1/1:0,12:12:32.99:286,33,0	1/1:2,14:16:38.99:339,39,0	1/1:3,18:21:47.47:416,47,0	0/0:8,0:8:18.05:0,18,199	0/0:25,0:25:72.15:0,72,771	1/1:3,15:18:44.98:391,45,0	1/1:2,14:16:41.99:364,42,0	1/1:1,17:18:47.99:417,48,0	1/1:0,2:2:6:52,6,0
chr10	40819695	.	TCTACTGCTGAAG	T	8110.74	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=13.435;DP=852;FS=2.041;HRun=0;HaplotypeScore=288.0801;InbreedingCoeff=0.9999;MQ=78.69;MQ0=0;MQRankSum=-13.251;QD=73.07;ReadPosRankSum=1.193;VQSLOD=3.9192;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,157,9191	0/0:21,0:21:63.22:0,63,3767	0/0:20,0:20:57.20:0,57,2587	0/0:23,0:23:63.08:0,63,2859	1/1:3,23:26:57.16:2045,57,0	0/0:22,0:22:60.19:0,60,3439	0/0:41,0:41:99:0,123,7070	0/0:35,0:35:99:0,102,5389	0/0:34,0:34:99:0,102,6113	0/0:39,0:39:99:0,114,6266	0/0:22,0:22:66.21:0,66,3574	0/0:32,0:32:93.32:0,93,5470	0/0:33,0:33:96.33:0,96,5854	1/1:5,20:25:51.18:1921,51,0	0/0:37,0:37:99:0,105,6417	1/1:6,33:39:78.27:2909,78,0	1/1:5,16:21:33.11:1236,33,0	0/0:32,0:32:96.33:0,96,5903	0/0:26,0:26:78.26:0,78,4366	0/0:37,0:37:99:0,111,6527	0/0:36,0:36:99:0,108,6670	0/0:30,0:30:90.30:0,90,4972	0/0:19,0:19:57.18:0,57,3185	0/0:36,0:36:99:0,108,6624	0/0:25,0:25:69.24:0,69,4115	0/0:41,0:41:99:0,120,6756	0/0:30,0:30:90.24:0,90,4409	0/0:16,0:16:48.16:0,48,3002
chr10	40820393	.	T	TTA	632.88	PASS	AC=6;AF=0.111;AN=54;BaseQRankSum=-1.247;DP=342;FS=25.118;HRun=0;HaplotypeScore=56.0302;InbreedingCoeff=0.7136;MQ=36.56;MQ0=78;MQRankSum=-3.202;QD=21.10;ReadPosRankSum=-1.963;VQSLOD=1.1523;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:12:24.08:0,24,315	1/1:6,2:5:6.02:103,6,0	./.	0/0:2,0:2:0:0,0,0	0/0:23,0:22:45.15:0,45,591	1/1:6,8:12:24.08:396,24,0	1/1:2,6:7:18.06:264,18,0	0/0:25,0:14:39.09:0,39,494	0/0:8,0:5:12.04:0,12,158	0/0:21,0:19:39.13:0,39,511	0/0:10,0:8:9.03:0,9,118	0/0:14,0:6:12.04:0,12,151	0/0:7,0:5:12.04:0,12,156	0/0:9,0:7:21.07:0,21,273	0/0:20,0:15:39.13:0,39,510	0/0:14,0:11:21.07:0,21,275	0/0:16,0:9:15.05:0,15,197	0/0:14,0:7:12.04:0,12,156	0/0:12,0:5:12.01:0,12,140	0/0:17,0:15:30.05:0,30,367	0/0:5,0:2:3.01:0,3,39	0/0:9,0:7:5.98:0,6,59	0/0:7,0:4:6.02:0,6,79	0/0:10,0:5:9.03:0,9,118	0/0:14,0:13:24.08:0,24,314	0/0:17,0:11:30.10:0,30,394	0/0:14,0:12:18.06:0,18,234	0/0:10,0:6:9.03:0,9,118
chr10	40820417	.	TAA	T	2462.86	PASS	AB=0.572;AC=31;AF=0.554;AN=56;BaseQRankSum=0.310;DP=361;FS=3.689;HRun=15;HaplotypeScore=62.8407;InbreedingCoeff=0.3943;MQ=65.89;MQ0=28;MQRankSum=-7.992;QD=11.35;ReadPosRankSum=3.256;VQSLOD=2.6496;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:4,7:12:1.70:145,0,2	0/1:1,1:2:3.14:21,0,3	0/0:43,0:13:22.58:0,23,169	0/0:31,0:12:18.77:0,19,113	0/0:6,1:20:3.39:0,3,143	0/1:2,3:10:56.68:63,0,57	0/1:3,1:10:5.45:5,0,71	1/1:8,12:19:35.94:316,36,0	0/1:1,1:9:8.47:8,0,33	1/1:3,10:13:26.49:209,26,0	1/1:3,7:9:17.98:158,18,0	0/0:6,0:8:12.99:0,13,75	0/0:1,0:4:7.49:0,7,26	0/0:4,0:11:25.41:0,25,97	1/1:7,9:13:23.81:253,24,0	0/0:10,0:10:21.91:0,22,112	0/1:6,3:10:15.97:69,0,16	1/1:4,4:6:11.97:104,12,0	1/1:3,5:8:5.81:97,6,0	1/1:4,8:14:23.49:228,23,0	1/1:2,2:4:5.97:53,6,0	0/1:1,2:4:3.30:21,0,3	0/0:5,0:8:12.95:0,13,58	0/1:0,1:4:9.30:18,0,9	1/1:4,10:12:26.96:237,27,0	1/1:4,8:12:20.46:206,20,0	1/1:4,9:11:20.95:185,21,0	0/1:3,11:12:4.41:254,0,4
chr10	40820436	.	A	AT	4400.88	PASS	AB=1.000;AC=33;AF=0.589;AN=56;BaseQRankSum=2.647;DP=464;FS=10.480;HRun=2;HaplotypeScore=78.9543;InbreedingCoeff=0.6980;MQ=69.15;MQ0=10;MQRankSum=-4.421;QD=14.29;ReadPosRankSum=3.053;VQSLOD=3.3886;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:15,2:17:44.94:416,45,0	0/0:6,0:6:18:0,18,203	0/0:69,0:19:25.06:0,25,208	0/1:43,0:17:8.86:9,0,132	0/0:23,0:23:19.12:0,19,303	0/0:16,0:16:47.31:0,47,410	0/0:11,0:11:32.92:0,33,333	1/1:23,0:23:57.26:453,57,0	0/0:12,0:12:29.58:0,30,250	1/1:23,0:21:55.69:478,56,0	1/1:11,1:12:29.74:265,30,0	0/1:9,0:9:2.13:2,0,90	0/0:5,0:5:11.99:0,12,106	0/1:15,0:15:2.39:2,0,145	1/1:15,1:16:41.82:383,42,0	0/1:10,0:10:1.75:2,0,86	0/1:22,0:22:37.34:37,0,104	1/1:13,1:13:32.02:325,32,0	1/1:14,0:13:33.42:303,33,0	1/1:13,1:14:13.70:208,14,0	1/1:7,0:7:15.81:125,16,0	1/1:5,0:5:11.90:92,12,0	0/0:9,0:9:20.99:0,21,196	0/0:5,0:5:8.95:0,9,77	1/1:20,0:19:47.88:428,48,0	1/1:16,0:16:46.72:360,47,0	1/1:13,0:13:11.16:228,11,0	1/1:14,1:15:37.73:285,38,0
chr10	40820438	.	T	TTA	7111.63	PASS	AB=0.737;AC=27;AF=0.482;AN=56;BaseQRankSum=-3.069;DP=485;FS=3.781;HRun=0;HaplotypeScore=84.4868;InbreedingCoeff=0.8703;MQ=67.26;MQ0=10;MQRankSum=-4.231;QD=31.75;ReadPosRankSum=0.777;VQSLOD=6.8389;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,8:17:45.78:629,46,0	0/0:6,0:6:18.01:0,18,254	0/0:66,0:18:25.05:0,25,221	0/0:40,0:16:8.60:0,9,160	0/0:17,0:24:38.28:0,38,340	0/0:15,0:16:47.33:0,47,476	0/0:12,0:12:35.89:0,36,423	1/1:11,12:27:66.57:787,67,0	0/0:12,0:12:29.58:0,30,281	1/1:7,15:23:61.76:903,62,0	1/1:4,7:11:32.75:459,33,0	0/0:5,0:9:22.63:0,23,137	0/0:5,0:5:11.99:0,12,116	0/0:10,0:15:33.58:0,34,205	1/1:7,10:17:41.86:616,42,0	0/0:7,0:12:22.10:0,22,153	0/0:15,0:25:5.80:0,6,179	1/1:6,7:13:32.05:441,32,0	1/1:7,9:15:39.37:578,39,0	1/1:10,6:17:22.37:268,22,0	1/1:3,4:7:15.88:212,16,0	1/1:3,2:5:11.91:151,12,0	0/0:9,0:10:0.48:0,0,197	0/0:5,0:5:9:0,9,105	1/1:6,13:19:47.92:710,48,0	1/1:11,9:20:48.97:543,49,0	0/1:9,5:14:4.04:379,0,4	1/1:8,5:15:35.06:436,35,0
chr10	40822438	.	CGTTCTAAGACGTTT	C	1029.03	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.925;DP=645;FS=7.470;HRun=0;HaplotypeScore=242.8757;InbreedingCoeff=0.9949;MQ=90.92;MQ0=0;MQRankSum=-5.096;QD=93.55;ReadPosRankSum=1.866;VQSLOD=2.4770;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:93.32:0,93,5909	1/1:2,9:11:27.09:1123,27,0	0/0:28,0:29:73.80:0,74,4051	0/0:24,0:24:63.22:0,63,3667	0/0:25,0:25:69.24:0,69,4470	0/0:15,0:14:39.12:0,39,2403	0/0:20,0:20:60.21:0,60,3853	0/0:29,0:29:75.26:0,75,4347	0/0:29,0:29:84.29:0,84,5601	0/0:27,0:27:75.25:0,75,4632	0/0:19,0:19:57.20:0,57,3589	0/0:29,0:29:84.27:0,84,5465	0/0:20,0:20:57.16:0,57,3414	0/0:26,0:26:75.26:0,75,5058	0/0:28,0:28:84.29:0,84,5631	0/0:16,0:16:48.15:0,48,3138	0/0:32,0:32:96.33:0,96,6480	0/0:22,0:22:54.15:0,54,3282	0/0:21,0:21:57.20:0,57,3768	0/0:27,0:27:75.26:0,75,4651	0/0:40,0:40:99:0,114,7548	0/0:21,0:21:63.22:0,63,4182	0/0:17,0:17:42.14:0,42,2748	0/0:21,0:21:57.20:0,57,3685	0/0:17,0:17:45.15:0,45,3082	0/0:21,0:21:60.20:0,60,3935	0/0:19,0:18:51.18:0,51,3278	0/0:8,0:8:21.07:0,21,1224
chr10	40825593	.	G	GC	4974.28	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=11.868;DP=515;FS=146.190;HRun=2;HaplotypeScore=107.2401;InbreedingCoeff=0.9760;MQ=86.15;MQ0=0;MQRankSum=-15.031;QD=31.28;ReadPosRankSum=-0.690;VQSLOD=-0.4841;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,13:16:27.05:361,27,0	0/0:17,0:17:48.11:0,48,574	0/0:18,0:18:51.16:0,51,631	0/0:22,0:22:60.18:0,60,726	0/0:25,0:24:66.21:0,66,814	0/0:31,0:31:87.27:0,87,1078	0/0:25,0:25:69.69:0,70,857	1/1:0,14:14:42.14:596,42,0	0/0:30,0:30:87.25:0,87,1053	1/1:4,10:14:27.08:369,27,0	1/1:3,2:5:6.02:83,6,0	0/0:21,0:21:63.20:0,63,781	0/0:22,0:22:63.18:0,63,767	0/0:25,0:25:72.23:0,72,889	1/1:1,13:14:30.10:428,30,0	0/0:31,0:31:93.29:0,93,1153	0/0:37,0:37:99:0,111,1375	1/1:1,9:10:23.87:298,24,0	1/1:1,7:7:21.07:296,21,0	1/1:0,12:12:27.09:374,27,0	1/1:1,8:9:12.26:208,12,0	1/1:1,14:16:30.10:427,30,0	0/0:16,0:16:48.15:0,48,595	0/0:36,0:36:99:0,99,1226	1/1:0,10:10:30.10:428,30,0	1/1:0,11:11:33.11:472,33,0	1/1:2,14:16:33.11:462,33,0	1/1:0,4:4:12.04:172,12,0
chr10	40825599	.	TCC	T	4477.41	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=15.164;DP=462;FS=144.603;HRun=2;HaplotypeScore=105.9542;InbreedingCoeff=0.9674;MQ=92.18;MQ0=0;MQRankSum=-14.403;QD=43.90;ReadPosRankSum=1.060;VQSLOD=0.2573;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,8:8:24.08:374,24,0	0/0:16,0:16:45.15:0,45,912	0/0:19,0:19:54.16:0,54,996	0/0:24,0:24:65.38:0,65,1316	0/0:28,0:27:78.27:0,78,1571	0/0:30,0:30:90.30:0,90,1780	0/0:25,0:25:75.26:0,75,1523	1/1:1,6:7:21.06:316,21,0	0/0:27,0:27:81.28:0,81,1633	1/1:1,5:6:18.06:292,18,0	1/1:0,2:2:6.02:94,6,0	0/0:22,0:22:66.23:0,66,1322	0/0:20,0:20:60.21:0,60,1204	0/0:25,0:25:72.23:0,72,1425	1/1:1,9:10:30.09:462,30,0	0/0:34,0:34:99:0,102,2046	0/0:35,0:35:99:0,105,2057	1/1:0,6:6:14.88:180,15,0	1/1:0,4:3:9.03:134,9,0	1/1:2,7:9:27.08:395,27,0	1/1:1,5:6:16.97:184,17,0	1/1:1,10:11:30.10:479,30,0	0/0:18,0:18:54.18:0,54,1061	0/0:37,0:37:99:0,108,2151	1/1:0,10:10:30.10:476,30,0	1/1:1,8:9:27.09:439,27,0	1/1:1,9:10:30.10:457,30,0	1/1:0,4:4:12.04:195,12,0
chr10	40825940	.	CAGAG	C	386.35	PASS	AB=0.890;AC=8;AF=0.286;AN=28;BaseQRankSum=3.509;DP=326;FS=20.054;HRun=0;HaplotypeScore=125.2070;InbreedingCoeff=0.2804;MQ=76.19;MQ0=6;MQRankSum=-2.994;QD=2.68;ReadPosRankSum=1.143;VQSLOD=1.1529;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	1/1:10,0:15:6.26:57,6,0	./.	0/1:30,0:23:0:0,0,0	0/0:19,0:19:9.01:0,9,140	0/1:19,0:19:24.92:25,0,122	0/0:17,0:17:8.83:0,9,202	./.	1/1:14,12:32:27.05:306,27,0	0/0:1,0:1:3.01:0,3,70	./.	0/1:21,3:25:71.02:71,0,291	0/1:13,9:23:15.08:38,0,15	0/0:24,0:24:21.07:0,21,387	./.	0/0:20,0:20:11.99:0,12,215	0/0:22,0:23:12.51:0,13,204	./.	./.	./.	./.	./.	0/0:16,0:16:8.93:0,9,97	0/0:40,0:40:46.94:0,47,741	./.	./.	./.	./.
chr10	40827575	.	TTGTGTG	T	820.40	PASS	AB=0.958;AC=20;AF=0.370;AN=54;BaseQRankSum=1.610;DP=482;FS=27.470;HRun=0;HaplotypeScore=117.0994;InbreedingCoeff=0.6029;MQ=67.97;MQ0=10;MQRankSum=-0.877;QD=4.85;ReadPosRankSum=-0.237;VQSLOD=0.7342;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:22:3.01:62,3,0	1/1:3,0:4:3.01:52,3,0	0/0:29,0:19:12:0,12,240	0/0:28,0:19:18.06:0,18,410	0/0:9,0:9:12.51:0,13,312	1/1:10,0:15:3.01:49,3,0	1/1:8,0:11:3.01:49,3,0	1/1:20,0:18:6.01:91,6,0	0/0:15,0:22:9.02:0,9,202	0/0:17,0:16:15.04:0,15,338	0/0:8,0:8:0.39:0,0,1	0/0:18,0:18:14.26:0,14,278	0/0:15,0:13:5.86:0,6,166	0/0:12,0:11:15.01:0,15,345	0/0:19,0:19:21.05:0,21,452	0/0:15,0:15:24.08:0,24,537	0/0:28,0:28:48.43:0,48,1219	0/0:21,0:20:35.36:0,35,605	1/1:16,1:17:14.84:222,15,0	./.	0/1:23,1:23:47.48:90,0,47	1/1:7,1:9:5.97:82,6,0	0/0:11,0:11:3.01:0,3,75	0/0:33,0:33:63.19:0,63,1598	0/0:20,0:20:18.05:0,18,349	0/1:21,1:22:0.57:133,0,1	1/1:10,0:13:4.96:122,5,0	1/1:4,4:7:5.17:39,5,0
chr10	40827606	.	T	TGAGAGAGA	2543.60	PASS	AB=1.000;AC=30;AF=0.577;AN=52;BaseQRankSum=1.066;DP=434;FS=2.328;HRun=0;HaplotypeScore=125.8772;InbreedingCoeff=0.6384;MQ=44.21;MQ0=12;MQRankSum=-4.874;QD=10.69;ReadPosRankSum=-5.063;VQSLOD=0.8464;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:17:3.46:24,3,0	1/1:9,0:8:14.20:244,14,0	./.	./.	0/0:16,0:17:14.10:0,14,298	0/1:18,0:17:51.83:228,0,52	1/1:18,0:17:7.41:36,7,0	1/1:25,0:22:22.75:311,23,0	0/0:14,0:14:8.16:0,8,347	1/1:14,6:21:24.01:445,24,0	0/1:5,0:5:0.08:0,0,0	0/0:12,0:12:12.04:0,12,292	0/0:9,0:6:5.89:0,6,146	0/0:15,0:13:17.94:0,18,276	0/0:10,3:18:2.57:0,3,15	0/0:13,0:13:15.02:0,15,302	0/0:30,0:30:21.74:0,22,373	1/1:22,0:21:24.92:525,25,0	1/1:14,0:14:17.92:261,18,0	1/1:11,0:11:3.01:47,3,0	1/1:20,0:17:2.97:20,3,0	1/1:12,0:12:3.07:11,3,0	0/0:11,0:11:2.60:0,3,74	0/0:43,0:42:68.83:0,69,1553	1/1:8,0:8:6.01:120,6,0	1/1:11,0:8:8.24:170,8,0	1/1:11,0:11:12.02:185,12,0	1/1:10,0:9:5.99:98,6,0
chr10	40829185	.	CT	C	1851.88	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=4.120;DP=701;FS=1.659;HRun=5;HaplotypeScore=77.1437;InbreedingCoeff=0.9694;MQ=84.52;MQ0=0;MQRankSum=-1.875;QD=28.06;ReadPosRankSum=2.484;VQSLOD=4.1407;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,126,1672	0/0:11,0:11:30.10:0,30,410	0/0:27,0:27:72.17:0,72,892	0/0:18,0:18:51.16:0,51,664	0/0:21,0:21:60.20:0,60,819	1/1:1,22:23:63.18:715,63,0	1/1:3,40:43:99:1259,111,0	0/0:39,0:39:99:0,105,1424	0/0:24,0:24:72.23:0,72,971	0/0:25,0:25:75.25:0,75,1016	0/0:10,0:10:24.07:0,24,313	0/0:22,1:23:32.20:0,32,813	0/0:25,0:25:72.18:0,72,909	0/0:28,0:28:84.26:0,84,1119	0/0:30,0:30:87.25:0,87,1143	0/0:24,0:24:66.22:0,66,891	0/0:29,0:29:81.26:0,81,1093	0/0:22,0:22:57.17:0,57,759	0/0:16,0:16:48.14:0,48,629	0/0:17,0:17:51.17:0,51,697	0/0:45,0:45:99:0,120,1625	0/0:24,0:24:66.22:0,66,902	0/0:19,0:19:57.18:0,57,760	0/0:34,0:34:99:0,99,1354	0/0:19,0:19:57.18:0,57,765	0/0:34,0:34:99:0,99,1317	0/0:23,0:23:69.17:0,69,922	0/0:4,0:4:9.03:0,9,123
chr10	40829282	.	GC	G	1754.13	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-2.428;DP=729;FS=2.411;HRun=3;HaplotypeScore=111.5439;InbreedingCoeff=0.9985;MQ=83.67;MQ0=0;MQRankSum=-0.088;QD=30.77;ReadPosRankSum=-0.072;VQSLOD=2.8449;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,123,2026	1/1:0,8:8:24.08:298,24,0	0/0:28,0:28:63.23:0,63,964	0/0:21,0:21:46.33:0,46,670	0/0:40,0:40:99:0,114,1618	1/1:2,18:20:57.18:707,57,0	1/1:3,26:29:72.23:893,72,0	0/0:35,0:35:90.30:0,90,1271	0/0:26,0:26:78.25:0,78,1101	0/0:26,0:26:78.26:0,78,1123	0/0:16,0:16:48.15:0,48,670	0/0:25,0:25:75.23:0,75,1058	0/0:18,0:18:48.14:0,48,656	0/0:26,0:26:72.24:0,72,1036	0/0:35,0:35:99:0,99,1390	0/0:32,0:32:96.32:0,96,1378	0/0:32,0:32:96.28:0,96,1324	0/0:21,0:21:63.18:0,63,868	0/0:22,0:22:62.24:0,62,865	0/0:24,0:24:69.23:0,69,991	0/0:37,0:37:99:0,111,1578	0/0:23,0:23:69.19:0,69,951	0/0:13,0:13:36.12:0,36,508	0/0:39,0:39:99:0,114,1640	0/0:19,0:19:54.18:0,54,777	0/0:27,0:27:78.26:0,78,1122	0/0:28,0:28:84.28:0,84,1206	0/0:8,0:8:24.08:0,24,345
chr10	40830248	.	TACAC	T	506.11	PASS	AB=0.754;AC=19;AF=0.452;AN=42;BaseQRankSum=3.588;DP=501;FS=1.191;HRun=0;HaplotypeScore=96.3722;InbreedingCoeff=0.4338;MQ=67.37;MQ0=12;MQRankSum=-2.414;QD=3.31;ReadPosRankSum=-1.424;VQSLOD=1.8660;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:5.67:0,6,34	1/1:7,2:9:3.01:46,3,0	./.	./.	./.	1/1:5,0:16:6.01:56,6,0	./.	./.	0/0:24,0:23:5.78:0,6,35	0/0:10,0:10:6.13:0,6,26	1/1:6,3:9:3.01:46,3,0	0/0:22,0:22:15:0,15,222	0/0:10,0:12:11.68:0,12,77	0/1:6,0:10:17.95:22,0,18	1/1:18,5:23:6.49:91,6,0	1/1:9,0:13:5.60:37,6,0	0/0:25,0:24:2.98:0,3,23	1/1:14,4:18:17.85:238,18,0	./.	1/1:12,0:10:1.25:3,1,0	0/0:22,0:22:5.34:0,5,22	0/0:17,0:17:5.98:0,6,47	0/0:17,0:17:14.85:0,15,107	0/0:43,0:45:62.84:0,63,979	./.	1/1:17,0:21:5.93:45,6,0	0/1:11,0:13:2.82:23,0,3	0/1:4,0:6:10.83:47,0,11
chr10	40832747	.	GTCTGAGAACGCTGAGGCTACATTTCAGCCCCGC	G	23476.80	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=14.006;DP=576;FS=7.529;HRun=0;HaplotypeScore=472.6737;InbreedingCoeff=0.9658;MQ=81.52;MQ0=0;MQRankSum=-13.004;QD=110.74;ReadPosRankSum=5.359;VQSLOD=2.7896;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:8,12:19:24.08:1945,24,0	0/0:11,0:11:33.11:0,33,4388	0/0:20,0:20:51.15:0,51,3266	0/0:18,0:18:48.16:0,48,2489	0/0:23,0:23:69.24:0,69,7241	0/0:21,0:21:60.21:0,60,7675	0/0:28,0:28:81.26:0,81,8661	1/1:11,0:10:12.03:221,12,0	0/0:35,0:35:99:0,99,12401	1/1:6,9:15:27.09:1910,27,0	1/1:4,5:9:12:795,12,0	0/0:27,0:27:78.27:0,78,9562	0/0:30,0:30:90.31:0,90,9830	0/0:29,0:29:81.26:0,81,8543	1/1:10,11:21:33.11:2853,33,0	0/0:33,0:32:96.30:0,96,11169	0/0:37,0:37:99:0,105,12987	1/1:8,5:13:15.05:1298,15,0	1/1:4,4:8:12:799,12,0	1/1:8,9:17:27.09:2204,27,0	1/1:9,8:17:5.64:440,6,0	1/1:4,12:16:33.11:2587,33,0	0/0:20,0:20:57.17:0,57,6479	0/0:32,0:32:87.30:0,87,10208	1/1:4,5:9:15.05:1296,15,0	1/1:10,12:22:36.10:2718,36,0	1/1:6,12:18:33.11:2852,33,0	1/1:9,7:16:18.06:1558,18,0
chr10	40833594	.	T	TCTTC	977.75	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=3.388;DP=439;FS=21.464;HRun=0;HaplotypeScore=80.3592;InbreedingCoeff=0.3631;MQ=53.58;MQ0=30;MQRankSum=0.291;QD=7.09;ReadPosRankSum=1.026;VQSLOD=-0.0751;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:21:56.95:0,57,634	0/0:3,0:3:2.99:0,3,23	0/0:8,0:7:21:0,21,202	0/0:9,0:6:1.54:0,2,27	1/1:8,11:16:2.69:184,3,0	0/0:21,0:20:41.89:0,42,360	0/0:13,0:13:26.56:0,27,216	0/0:37,0:32:86.70:0,87,734	0/0:20,0:20:51.71:0,52,467	0/0:19,0:19:40.86:0,41,337	0/1:10,0:10:16.92:17,0,140	0/0:14,0:13:23.85:0,24,188	0/0:17,0:14:29.50:0,30,300	1/1:12,0:10:23.89:199,24,0	0/0:11,0:11:32.88:0,33,364	1/1:14,0:12:13.47:282,13,0	1/1:15,0:11:8.95:187,9,0	0/0:23,0:23:12.32:0,12,205	0/0:20,0:17:47.94:0,48,465	0/0:12,0:10:23.96:0,24,247	0/0:13,0:12:35.96:0,36,369	0/1:13,0:11:28.59:29,0,160	0/0:10,0:8:8.99:0,9,77	0/1:23,0:23:99:166,0,139	0/1:18,0:17:41.47:41,0,228	0/0:26,0:26:68.83:0,69,794	0/1:14,0:13:36.20:36,0,54	0/0:3,0:3:9.03:0,9,155
chr10	40833662	.	CCTCT	C	1053.91	PASS	AB=1.000;AC=25;AF=0.521;AN=48;BaseQRankSum=1.496;DP=402;FS=23.257;HRun=0;HaplotypeScore=99.8191;InbreedingCoeff=0.6296;MQ=33.79;MQ0=56;MQRankSum=1.567;QD=4.95;ReadPosRankSum=2.091;VQSLOD=-0.0135;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:9:0:0,0,0	0/0:9,0:8:5.04:0,5,21	./.	./.	1/1:18,0:12:8.91:71,9,0	1/1:12,0:11:5.67:82,6,0	1/1:20,0:15:13.51:117,14,0	0/0:30,0:24:14.84:0,15,100	1/1:28,0:27:20.98:194,21,0	0/0:23,0:22:24.77:0,25,150	0/0:18,0:17:5.83:0,6,33	1/1:11,2:11:6.01:75,6,0	1/1:17,0:13:13.55:119,14,0	1/1:10,0:7:9.01:100,9,0	0/0:15,0:14:11.42:0,11,67	1/1:10,0:8:9.02:119,9,0	1/1:21,0:12:7.19:165,7,0	1/1:13,0:10:2.59:10,3,0	0/0:14,0:12:5.99:0,6,50	./.	0/0:9,0:7:5.88:0,6,36	0/0:12,0:9:1.31:0,1,3	1/1:5,4:7:2.70:17,3,0	1/1:25,0:23:16.03:147,16,0	0/0:14,0:13:2.94:0,3,18	0/0:17,0:17:11.89:0,12,85	0/1:16,0:15:4.20:4,0,11	./.
chr10	40833687	.	CTCTCTCTCTCTCTCTT	C	1463.86	PASS	AB=1.000;AC=12;AF=0.240;AN=50;BaseQRankSum=6.572;DP=466;FS=3.051;HRun=0;HaplotypeScore=183.9650;InbreedingCoeff=0.2186;MQ=38.25;MQ0=48;MQRankSum=-0.539;QD=8.18;ReadPosRankSum=1.853;VQSLOD=2.8103;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:13:2.56:18,3,0	0/0:11,0:10:15.40:0,15,532	./.	./.	0/0:18,0:14:18.32:0,18,609	0/0:23,0:22:42.46:0,42,864	0/0:20,0:17:10.45:0,10,441	0/1:23,0:20:69.51:70,0,284	1/1:18,17:33:10.74:701,11,0	0/1:23,0:20:54.40:54,0,421	0/1:19,0:18:9.96:10,0,79	0/0:13,0:11:19.40:0,19,404	1/1:18,0:16:29.83:571,30,0	0/0:14,0:13:21.06:0,21,651	0/0:15,0:13:13.09:0,13,317	0/0:15,0:14:30.01:0,30,794	0/0:31,0:22:47.98:0,48,1620	0/0:14,0:11:15.01:0,15,211	0/1:18,0:16:29.87:30,0,265	./.	0/0:12,0:11:5.09:0,5,142	0/0:16,0:13:9.74:0,10,257	0/0:14,0:12:20.40:0,20,488	0/0:33,0:29:50.72:0,51,1728	0/0:9,0:8:6.02:0,6,90	0/1:20,0:20:99:133,0,258	0/0:16,0:15:6.34:0,6,108	0/1:8,0:4:27.96:29,0,28
chr10	40833699	.	CTCTTTCTTTCTTTCTTTCTT	C	3637.25	PASS	AB=0.975;AC=17;AF=0.304;AN=56;BaseQRankSum=6.092;DP=437;FS=2.595;HRun=0;HaplotypeScore=195.3685;InbreedingCoeff=0.2497;MQ=46.74;MQ0=22;MQRankSum=0.528;QD=18.56;ReadPosRankSum=0.946;VQSLOD=2.8758;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:12,0:11:0.92:83,1,0	0/0:9,0:8:20.90:0,21,1042	0/0:4,0:2:6.02:0,6,210	0/0:10,0:3:9.03:0,9,406	0/0:14,0:12:28.34:0,28,1501	0/0:23,0:23:52.44:0,52,2727	0/0:17,0:15:40.66:0,41,1645	1/1:23,0:21:14.94:745,15,0	0/1:28,0:28:7.09:7,0,262	0/1:27,0:25:49.49:700,0,49	0/1:17,0:17:47.97:81,0,48	0/0:16,0:15:36.12:0,36,1640	0/1:14,0:15:13.41:13,0,703	0/0:14,0:13:32.23:0,32,1711	0/0:9,0:7:10.59:0,11,208	0/0:16,0:16:42.14:0,42,2431	0/0:27,0:23:54.19:0,54,3482	0/0:15,0:12:1.47:0,1,248	1/1:5,10:15:26.99:589,27,0	1/1:2,0:2:3.01:92,3,0	0/0:11,0:10:7.79:0,8,76	0/0:12,0:12:8.15:0,8,117	0/0:15,0:15:33.58:0,34,1646	0/0:29,0:27:54.64:0,55,3343	0/1:10,0:9:27.12:133,0,27	0/1:21,0:21:20.11:993,0,20	0/1:16,0:16:12.10:12,0,63	1/1:7,0:3:6.01:190,6,0
chr10	40833701	.	CTTTCTTTCTTTCTTTCTT	C	4168.95	PASS	AB=0.812;AC=21;AF=0.375;AN=56;BaseQRankSum=6.790;DP=432;FS=0.521;HRun=0;HaplotypeScore=181.3876;InbreedingCoeff=0.4028;MQ=47.30;MQ0=19;MQRankSum=-1.024;QD=19.30;ReadPosRankSum=1.343;VQSLOD=2.6440;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:11,0:11:0.07:82,0,0	0/0:9,0:8:12.07:0,12,1081	0/0:4,0:2:6.02:0,6,210	0/0:10,0:3:9.03:0,9,397	0/0:15,0:13:33.01:0,33,1585	0/0:23,0:23:52.84:0,53,2576	0/0:17,0:15:42.10:0,42,1581	1/1:10,14:22:38.51:797,39,0	0/1:30,0:28:98.12:98,0,237	1/1:6,20:24:6.25:752,6,0	0/1:6,10:16:15.37:83,0,15	0/0:16,0:15:36.12:0,36,1550	0/1:17,0:16:57.03:57,0,711	0/0:14,0:13:32.90:0,33,1604	0/1:8,0:7:4.41:4,0,139	0/0:16,0:16:42.14:0,42,2302	0/0:28,0:25:63.18:0,63,3538	0/1:5,0:11:38.77:39,0,225	1/1:15,0:15:27.51:578,28,0	1/1:2,0:2:3.01:92,3,0	0/0:9,0:8:8.15:0,8,75	0/0:12,0:12:8.43:0,8,63	0/0:15,0:15:33.58:0,34,1609	0/0:28,0:26:54.66:0,55,3171	1/1:10,0:9:4.21:139,4,0	1/1:2,18:20:50.74:1205,51,0	0/1:3,0:16:28.49:53,0,28	1/1:7,0:3:6.49:191,6,0
chr10	40835086	.	C	CTA	4406.27	PASS	AB=0.625;AC=29;AF=0.518;AN=56;BaseQRankSum=2.050;DP=577;FS=12.622;HRun=0;HaplotypeScore=134.8151;InbreedingCoeff=0.9005;MQ=64.49;MQ0=10;MQRankSum=0.773;QD=14.12;ReadPosRankSum=-1.005;VQSLOD=3.6212;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:40,0:39:56.43:512,56,0	0/1:2,0:5:33.98:37,0,34	0/0:29,0:22:62.83:0,63,544	0/0:33,0:24:55.32:0,55,629	0/0:15,0:15:7.40:0,7,69	0/0:16,0:25:41.13:0,41,348	0/0:18,0:25:63.41:0,63,535	1/1:26,0:25:67.32:547,67,0	0/0:9,0:17:41.93:0,42,347	1/1:17,0:16:36.69:364,37,0	1/1:14,0:14:14.95:119,15,0	0/0:19,0:19:49.81:0,50,426	0/0:10,0:13:35.95:0,36,298	0/0:15,0:15:27.67:0,28,209	1/1:23,0:22:29.98:270,30,0	0/0:11,0:11:19.09:0,19,140	0/0:22,0:22:37.94:0,38,299	1/1:15,0:14:30.31:186,30,0	1/1:20,0:19:47.71:377,48,0	1/1:21,1:23:36.01:395,36,0	1/1:26,0:25:30.73:271,31,0	1/1:23,0:23:32.94:313,33,0	0/0:8,0:8:17.98:0,18,149	0/0:32,0:33:77.34:0,77,723	1/1:17,0:17:11.89:90,12,0	1/1:7,19:26:50.29:465,50,0	1/1:22,0:22:44.86:377,45,0	1/1:4,0:14:8.97:83,9,0
chr10	40835592	.	G	GTTTT	8280.77	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=0.585;DP=506;FS=0.856;HRun=10;HaplotypeScore=99.8659;InbreedingCoeff=0.8777;MQ=72.44;MQ0=0;MQRankSum=-7.378;QD=28.65;ReadPosRankSum=-5.734;VQSLOD=2.1633;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:25:30.09:491,30,0	0/0:0,0:4:4.62:0,5,11	0/0:11,0:13:20.22:0,20,242	0/1:17,0:18:4.84:5,0,150	0/0:20,0:20:48.15:0,48,678	0/0:2,0:13:11.19:0,11,28	0/0:3,0:14:12.40:0,12,30	1/1:11,0:27:62.91:787,63,0	0/0:16,0:16:45.15:0,45,636	1/1:4,15:21:42.11:719,42,0	1/1:3,20:25:54.02:949,54,0	0/0:14,0:14:36.07:0,36,484	0/0:18,0:18:45:0,45,597	0/0:7,0:7:21.07:0,21,296	1/1:3,11:16:18.06:358,18,0	0/0:25,0:27:66.13:0,66,877	0/0:36,0:37:56.33:0,56,1220	1/1:3,22:25:33.11:777,33,0	1/1:9,0:10:26.93:336,27,0	1/1:4,2:18:45.15:789,45,0	1/1:3,0:7:3.01:31,3,0	1/1:1,0:5:5.93:40,6,0	0/0:18,0:18:30.27:0,30,601	0/0:14,0:14:25.77:0,26,378	1/1:4,19:25:48.16:1042,48,0	1/1:8,2:21:48.07:742,48,0	1/1:4,1:29:45.12:857,45,0	1/1:3,1:14:18.06:357,18,0
chr10	40836259	.	CG	C	8894.27	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=13.088;DP=657;FS=1.713;HRun=4;HaplotypeScore=67.0673;InbreedingCoeff=0.9943;MQ=81.50;MQ0=0;MQRankSum=-1.898;QD=28.88;ReadPosRankSum=2.156;VQSLOD=4.8933;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,31:31:69.21:825,69,0	0/0:15,0:15:45.15:0,45,622	0/0:15,0:15:32.91:0,33,418	0/0:19,0:19:24.05:0,24,313	0/0:18,0:18:54.17:0,54,730	0/0:27,0:27:75.17:0,75,968	0/0:33,0:33:99:0,99,1310	1/1:1,20:21:60.10:698,60,0	0/0:22,0:22:66.20:0,66,899	1/1:2,22:24:60.01:666,60,0	1/1:1,10:11:11.05:173,11,0	0/0:29,0:29:78.16:0,78,1005	0/0:23,0:23:66.15:0,66,894	0/0:21,0:21:60.12:0,60,761	1/1:0,29:29:75.23:896,75,0	0/0:22,0:22:63.20:0,63,858	0/0:52,0:52:99:0,147,1943	1/1:0,31:31:87.27:1041,87,0	1/1:1,19:20:54.03:608,54,0	1/1:1,20:21:53.83:620,54,0	1/1:1,33:34:75.23:896,75,0	1/1:1,13:14:30.09:359,30,0	0/0:20,0:20:60.19:0,60,811	0/0:33,0:33:99:0,99,1288	1/1:1,21:22:56.23:666,56,0	1/1:4,18:22:36.92:539,37,0	1/1:1,17:18:48.01:552,48,0	1/1:0,10:10:30.09:355,30,0
chr10	40837018	.	C	CCT	2969.69	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-8.507;DP=685;FS=14.078;HRun=0;HaplotypeScore=104.1156;InbreedingCoeff=0.8309;MQ=77.75;MQ0=2;MQRankSum=-1.404;QD=34.13;ReadPosRankSum=1.182;VQSLOD=5.3318;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,110,1323	0/0:8,0:8:24.08:0,24,300	0/0:54,0:29:1.28:0,1,209	0/0:60,1:41:21.73:0,22,596	1/1:1,19:20:57.19:898,57,0	0/0:22,0:22:48.15:0,48,599	0/0:24,0:24:57.18:0,57,713	0/0:22,0:22:54.16:0,54,658	0/0:23,0:23:60.18:0,60,734	0/0:19,0:19:54.16:0,54,663	0/0:11,0:11:33.11:0,33,413	0/0:31,0:31:84.27:0,84,1047	0/0:16,0:16:39.12:0,39,485	1/1:3,18:21:54.18:881,54,0	0/0:15,0:15:39.12:0,39,488	1/1:6,18:24:13.63:733,14,0	1/1:4,18:22:4.60:606,5,0	0/0:25,0:25:60.15:0,60,732	0/0:15,0:15:36.11:0,36,448	0/0:17,0:17:48.15:0,48,597	0/0:46,0:47:99:0,111,1383	0/0:22,0:22:51.14:0,51,622	0/0:16,0:16:36.11:0,36,449	0/0:38,0:38:99:0,99,1238	0/0:18,0:19:0.31:0,0,491	0/0:19,0:19:48.15:0,48,600	0/0:22,0:22:66.21:0,66,823	0/0:8,0:8:18.04:0,18,210
chr10	40838362	.	T	TAC	1100.51	PASS	AB=0.972;AC=29;AF=0.558;AN=52;BaseQRankSum=-0.586;DP=469;FS=7.331;HRun=0;HaplotypeScore=104.3400;InbreedingCoeff=0.2102;MQ=66.02;MQ0=6;MQRankSum=0.335;QD=3.64;ReadPosRankSum=0.251;VQSLOD=1.8824;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:21:6.72:126,0,7	0/1:5,0:5:20.67:21,0,25	./.	./.	0/0:15,0:15:0:0,0,0	1/1:17,1:18:8.18:35,8,0	1/1:18,0:29:2.70:17,3,0	0/1:16,0:16:0:0,0,0	1/1:12,7:20:8.86:132,9,0	1/1:14,0:14:2.69:18,3,0	0/1:7,0:7:0:0,0,0	0/1:11,0:11:27.76:28,0,105	0/0:11,0:11:11.99:0,12,115	0/0:12,0:14:3.56:0,4,13	0/1:12,4:18:34.74:117,0,35	0/0:11,0:18:13.88:0,14,64	0/0:16,0:23:8.52:0,9,42	1/1:22,1:23:4.90:169,5,0	0/1:19,0:19:0.94:53,0,1	1/1:12,0:12:8.98:73,9,0	0/1:25,0:25:2.90:75,0,3	1/1:10,0:10:3.01:40,3,0	0/0:3,0:3:3.01:0,3,32	0/0:23,0:26:28.47:0,28,295	1/1:9,0:9:3.01:32,3,0	0/1:14,0:14:21.22:64,0,21	1/1:11,5:15:9.03:132,9,0	1/1:8,4:13:9.03:119,9,0
chr10	40838609	.	G	GTTTTT	10615.55	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=-3.036;DP=560;FS=6.009;HRun=11;HaplotypeScore=117.6174;InbreedingCoeff=0.8597;MQ=67.56;MQ0=2;MQRankSum=-7.701;QD=33.38;ReadPosRankSum=-4.325;VQSLOD=2.4160;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:11,19:34:5.88:1242,6,0	0/0:2,0:6:7.44:0,7,27	0/0:37,0:20:1.40:0,1,343	0/1:29,0:21:56.72:57,0,264	0/0:3,0:22:37.65:0,38,137	0/0:24,0:24:63.08:0,63,944	0/0:14,0:16:30.57:0,31,528	1/1:22,16:43:90.22:1669,90,0	0/0:12,0:13:35.55:0,36,512	1/1:6,0:16:30.07:425,30,0	1/1:2,0:8:21.07:347,21,0	0/0:16,0:17:38.51:0,39,566	0/0:18,0:18:48.09:0,48,743	0/0:0,0:9:17.47:0,17,63	1/1:4,1:15:24.54:422,25,0	0/0:5,0:23:48.74:0,49,251	0/0:4,0:17:26.43:0,26,185	1/1:7,2:20:30.57:570,31,0	1/1:16,2:30:25.43:1341,25,0	1/1:5,14:22:35.86:787,36,0	1/1:2,4:6:9.03:203,9,0	1/1:9,3:20:33.11:647,33,0	0/0:15,0:15:29.99:0,30,467	0/0:23,0:23:66.16:0,66,1028	1/1:13,0:20:49.97:786,50,0	1/1:3,10:17:48.11:1122,48,0	1/1:4,14:21:27.09:715,27,0	1/1:6,4:11:15.05:283,15,0
chr10	40838830	.	T	TAAG	10874.36	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-11.353;DP=498;FS=5.934;HRun=0;HaplotypeScore=70.2192;InbreedingCoeff=0.9951;MQ=91.76;MQ0=0;MQRankSum=-7.175;QD=51.54;ReadPosRankSum=-0.638;VQSLOD=6.3287;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,19:23:48.12:1038,48,0	0/0:10,0:10:30.10:0,30,499	0/0:20,0:20:56.74:0,57,939	0/0:24,0:24:59.77:0,60,815	0/0:17,0:17:48.14:0,48,767	0/0:16,0:16:48.04:0,48,665	0/0:21,0:21:54.14:0,54,822	1/1:4,19:23:57.18:1205,57,0	0/0:18,0:18:51.17:0,51,848	1/1:1,9:10:27.09:564,27,0	1/1:0,10:10:27.05:530,27,0	0/0:21,0:21:60.16:0,60,943	0/0:19,0:19:54.15:0,54,847	0/0:16,0:16:42.13:0,42,673	1/1:1,16:17:48.12:1008,48,0	0/0:17,0:17:51.17:0,51,845	0/0:44,0:44:99:0,123,2038	1/1:3,14:17:36.08:763,36,0	1/1:3,9:14:39.12:785,39,0	1/1:0,12:14:36.12:752,36,0	1/1:0,12:13:30.57:647,31,0	1/1:2,6:8:12.02:271,12,0	0/0:9,0:9:27.09:0,27,449	0/0:35,0:35:99:0,105,1710	1/1:0,13:13:30.10:679,30,0	1/1:1,14:16:45.13:897,45,0	1/1:0,18:18:45.04:1016,45,0	1/1:0,13:13:33.11:719,33,0
chr10	40839149	.	C	CG	5082.09	PASS	AB=0.543;AC=17;AF=0.304;AN=56;BaseQRankSum=3.654;DP=530;FS=2.186;HRun=5;HaplotypeScore=68.1373;InbreedingCoeff=0.9009;MQ=89.11;MQ0=0;MQRankSum=-3.220;QD=30.25;ReadPosRankSum=-1.473;VQSLOD=4.8347;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,35:39:87.28:1145,87,0	0/0:6,0:6:15.04:0,15,161	0/0:25,0:25:51.09:0,51,530	0/0:16,0:17:39.06:0,39,398	0/0:13,0:13:33.05:0,33,338	0/0:13,0:13:9.26:0,9,298	0/0:24,0:24:60.13:0,60,634	1/1:2,16:18:42.14:552,42,0	0/0:14,0:14:42.11:0,42,451	0/0:20,0:20:51.13:0,51,546	0/0:7,0:7:18.03:0,18,185	0/0:25,0:25:69.14:0,69,730	0/0:22,0:22:60.11:0,60,629	0/0:22,0:22:63.16:0,63,677	0/0:13,0:13:39.10:0,39,419	0/0:16,0:16:45.11:0,45,484	0/0:27,0:27:78.16:0,78,826	0/0:36,0:36:96.24:0,96,1032	1/1:2,16:18:48.13:615,48,0	1/1:0,6:6:12:138,12,0	1/1:0,22:22:57.19:750,57,0	1/1:2,15:17:42.14:553,42,0	0/0:9,0:9:21.05:0,21,225	0/0:38,0:38:99:0,99,1063	0/0:15,0:15:36.09:0,36,386	0/1:3,16:19:13.34:541,0,13	1/1:3,13:16:34.35:437,34,0	1/1:0,13:13:27.09:354,27,0
chr10	40839286	.	T	TA	14102.99	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-14.836;DP=650;FS=1.289;HRun=0;HaplotypeScore=64.7681;InbreedingCoeff=0.9988;MQ=87.46;MQ0=0;MQRankSum=-3.331;QD=43.80;ReadPosRankSum=1.054;VQSLOD=5.3833;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,24:30:87.30:1382,87,0	0/0:12,0:12:36.11:0,36,488	0/0:28,0:28:81.24:0,81,1069	0/0:17,0:17:30.62:0,31,452	0/0:29,0:29:87.23:0,87,1178	0/0:20,0:20:60.20:0,60,838	0/0:16,0:16:48.15:0,48,654	1/1:3,28:30:84.27:1315,84,0	0/0:20,0:20:60.18:0,60,818	1/1:0,26:26:78.24:1194,78,0	1/1:0,17:17:48.16:767,48,0	0/0:30,0:30:90.29:0,90,1242	0/0:24,0:24:72.23:0,72,990	0/0:28,0:28:84.26:0,84,1144	1/1:0,15:15:36.12:575,36,0	0/0:12,0:12:36.12:0,36,504	0/0:34,0:34:99:0,102,1392	1/1:0,39:39:99:1774,111,0	1/1:0,18:18:51.17:813,51,0	1/1:1,28:29:81.21:1263,81,0	1/1:0,24:24:66.23:1055,66,0	1/1:1,17:18:44.48:657,44,0	0/0:25,0:25:69.21:0,69,933	0/0:33,0:33:99:0,99,1346	1/1:0,19:19:54.18:863,54,0	1/1:0,33:33:99:1583,99,0	1/1:1,12:13:36.12:575,36,0	1/1:0,10:10:18.06:287,18,0
chr10	40839395	.	C	CT	14166.85	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-14.303;DP=643;FS=3.833;HRun=1;HaplotypeScore=60.0989;InbreedingCoeff=0.9838;MQ=78.44;MQ0=0;MQRankSum=-6.939;QD=43.46;ReadPosRankSum=-0.874;VQSLOD=4.5878;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,40:42:99:1807,114,0	0/0:3,0:3:5.90:0,6,84	0/0:16,0:16:44.95:0,45,525	0/0:14,0:14:32.89:0,33,383	0/0:14,0:14:42.07:0,42,546	0/0:26,0:26:75.20:0,75,1019	0/0:29,0:29:87.25:0,87,1192	1/1:1,31:32:93.24:1431,93,0	0/0:21,0:21:63.21:0,63,877	1/1:0,18:18:51.17:816,51,0	1/1:0,10:10:27.09:426,27,0	0/0:30,0:30:81.27:0,81,1129	0/0:25,0:25:75.03:0,75,976	0/0:20,0:20:57.19:0,57,793	1/1:0,24:23:72.25:1151,72,0	0/0:15,0:15:45.15:0,45,625	0/0:51,0:51:99:0,147,2021	1/1:0,27:27:75.26:1198,75,0	1/1:1,19:20:57.16:863,57,0	1/1:0,11:11:27.02:401,27,0	1/1:1,55:56:99:2445,154,0	1/1:0,11:11:27.09:430,27,0	0/0:18,0:18:51.17:0,51,712	0/0:35,0:35:99:0,105,1443	1/1:1,23:24:60.20:949,60,0	1/1:0,27:27:78.22:1196,78,0	1/1:0,18:18:48.16:767,48,0	1/1:0,6:6:18.06:288,18,0
chr10	40839997	.	A	AC	3836.35	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=9.145;DP=416;FS=2.575;HRun=4;HaplotypeScore=119.4799;InbreedingCoeff=0.8759;MQ=70.18;MQ0=8;MQRankSum=-9.788;QD=17.20;ReadPosRankSum=-1.089;VQSLOD=2.5456;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,20:30:33.98:356,34,0	0/0:6,0:6:15.04:0,15,166	0/0:26,0:20:29.26:0,29,341	0/0:10,0:9:25.10:0,25,246	0/0:12,0:12:30.07:0,30,326	0/0:23,0:23:66.17:0,66,736	0/0:25,0:25:66.19:0,66,747	1/1:5,3:20:44.95:423,45,0	0/0:14,0:14:33.09:0,33,373	1/1:2,10:13:33:343,33,0	1/1:4,7:11:30.01:295,30,0	0/1:8,0:8:4.04:4,0,86	0/0:14,0:14:30.07:0,30,330	0/0:7,0:7:18.05:0,18,200	1/1:5,17:21:48.11:506,48,0	0/0:9,0:9:27.06:0,27,296	0/0:37,0:37:74.92:0,75,1031	1/1:2,7:9:17.86:182,18,0	1/1:6,13:19:45.04:457,45,0	1/1:4,3:7:15.01:139,15,0	1/1:4,18:21:0.94:2,1,0	1/1:6,6:12:23.86:219,24,0	0/0:4,0:4:6.01:0,6,58	0/0:6,0:6:16.28:0,16,159	1/1:2,8:9:15.03:154,15,0	1/1:5,12:16:44.94:411,45,0	1/1:5,7:12:30.06:311,30,0	1/1:1,6:7:3.01:34,3,0
chr10	40840006	.	C	CT	968.35	PASS	AB=0.696;AC=21;AF=0.375;AN=56;BaseQRankSum=11.795;DP=406;FS=2.576;HRun=0;HaplotypeScore=142.0774;InbreedingCoeff=0.5042;MQ=69.44;MQ0=8;MQRankSum=-9.804;QD=4.97;ReadPosRankSum=2.239;VQSLOD=3.7154;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,13:23:1.04:111,1,0	0/0:7,0:7:15.05:0,15,209	0/0:27,0:22:49.20:0,49,551	0/0:13,0:12:27.08:0,27,299	0/0:16,0:16:0.69:0,1,52	0/0:19,0:19:57.11:0,57,737	0/0:22,0:22:64.62:0,65,766	0/1:15,6:21:13.56:102,0,14	0/0:12,0:12:36.09:0,36,468	0/1:6,6:12:20.12:47,0,20	1/1:0,11:11:23.77:101,24,0	0/0:10,0:10:26.86:0,27,233	0/0:13,0:13:39.10:0,39,497	0/0:8,0:8:17.87:0,18,86	1/1:6,15:20:30.18:151,30,0	0/0:10,0:10:20.67:0,21,78	0/0:39,0:39:54.68:0,55,284	0/1:6,4:9:19.62:20,0,30	1/1:7,12:19:11.44:191,11,0	1/1:4,3:7:1.78:28,2,0	0/1:8,7:14:0.45:39,0,0	0/1:7,9:16:1.48:68,0,1	0/0:3,0:3:6.01:0,6,68	0/0:7,0:7:21.05:0,21,261	1/1:3,6:8:9.03:51,9,0	1/1:5,13:17:0.39:108,0,0	1/1:0,10:10:27.23:131,27,0	0/0:5,0:5:1.55:0,2,4
chr10	40840007	.	C	CT	2055.37	PASS	AB=1.000;AC=30;AF=0.536;AN=56;BaseQRankSum=11.664;DP=403;FS=23.040;HRun=0;HaplotypeScore=139.2080;InbreedingCoeff=0.7477;MQ=70.44;MQ0=8;MQRankSum=-10.931;QD=9.52;ReadPosRankSum=-0.516;VQSLOD=1.7883;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,14:23:33.03:183,33,0	0/0:8,0:8:18.41:0,18,226	0/0:26,0:22:40.63:0,41,525	0/0:14,0:13:23.80:0,24,297	0/0:15,0:15:2.79:0,3,72	0/0:19,0:19:57.15:0,57,740	0/0:20,0:20:58.50:0,59,710	1/1:12,6:18:15.75:149,16,0	0/0:13,0:13:36.09:0,36,469	1/1:6,6:12:28.61:197,29,0	1/1:0,11:11:28.65:147,29,0	0/0:10,0:10:26.85:0,27,231	0/0:13,0:13:39.10:0,39,496	0/1:8,0:8:25.86:26,0,60	1/1:6,14:20:45.10:235,45,0	0/1:10,0:10:18.19:18,0,55	0/0:39,0:39:43.98:0,44,291	1/1:6,4:9:0.05:71,0,0	1/1:7,12:19:51.08:335,51,0	1/1:5,3:8:17.14:101,17,0	1/1:9,7:15:11.54:82,12,0	1/1:7,9:16:28.33:167,28,0	0/0:2,0:2:6:0,6,65	0/0:7,0:7:21.05:0,21,262	1/1:3,6:8:17.26:96,17,0	1/1:6,13:18:45.90:291,46,0	1/1:0,10:10:28.83:156,29,0	1/1:3,0:3:2.80:13,3,0
chr10	40841112	.	TAAC	T	13093.86	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=12.053;DP=672;FS=1.554;HRun=0;HaplotypeScore=92.7823;InbreedingCoeff=0.9781;MQ=64.80;MQ0=0;MQRankSum=-1.229;QD=27.62;ReadPosRankSum=4.016;VQSLOD=4.9998;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,27:32:51.10:740,51,0	0/0:6,0:6:18.04:0,18,316	0/0:24,0:21:48.16:0,48,892	0/0:20,0:16:45.15:0,45,863	1/1:1,32:33:83.12:1060,83,0	0/0:23,0:23:63.20:0,63,1190	0/0:17,0:17:45.13:0,45,881	1/1:7,30:37:87.23:1197,87,0	0/0:21,0:21:57.20:0,57,1171	1/1:8,20:28:63.19:921,63,0	1/1:2,20:22:51.09:739,51,0	0/0:16,0:16:33.11:0,33,680	0/0:29,0:29:81.24:0,81,1530	1/1:1,24:25:39.13:587,39,0	1/1:5,19:24:45.15:666,45,0	1/1:5,33:38:5.99:930,6,0	1/1:6,17:23:39.13:587,39,0	1/1:3,17:20:33.11:496,33,0	1/1:3,14:17:42.07:550,42,0	1/1:7,27:34:74.82:963,75,0	1/1:3,18:21:27.09:406,27,0	1/1:1,18:19:45.07:649,45,0	0/0:26,0:26:57.19:0,57,1087	0/0:16,0:16:42.12:0,42,815	1/1:3,16:19:24.01:334,24,0	1/1:4,30:34:90.28:1304,90,0	1/1:6,35:41:54.10:784,54,0	1/1:1,6:7:12.04:181,12,0
chr10	40841561	.	GAC	G	2293.31	PASS	AB=0.514;AC=7;AF=0.125;AN=56;BaseQRankSum=7.988;DP=693;FS=1.040;HRun=0;HaplotypeScore=93.9266;InbreedingCoeff=0.8537;MQ=69.93;MQ0=1;MQRankSum=-0.216;QD=29.03;ReadPosRankSum=3.492;VQSLOD=5.2406;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:44.55:0,45,1294	0/0:13,0:13:39.11:0,39,654	0/0:31,0:24:68.73:0,69,1036	0/0:32,0:32:65.20:0,65,965	1/1:3,21:24:51.17:729,51,0	0/0:21,0:21:60.17:0,60,1029	0/0:27,0:27:72.19:0,72,1189	0/0:28,0:28:75.11:0,75,1201	0/0:20,0:20:54.17:0,54,943	0/0:23,0:23:69.23:0,69,1231	0/0:26,0:26:72.20:0,72,1219	0/0:18,0:18:51.16:0,51,903	0/0:17,0:17:51.16:0,51,853	1/1:2,15:17:39.13:557,39,0	0/0:28,0:27:78.27:0,78,1413	0/1:1,18:19:9.81:556,0,10	1/1:3,16:19:42.14:601,42,0	0/0:24,0:24:59.88:0,60,1059	0/0:23,0:23:60.16:0,60,964	0/0:33,0:33:93.32:0,93,1685	0/0:38,0:38:99:0,105,1852	0/0:23,0:23:63.22:0,63,1153	0/0:22,0:22:63.19:0,63,1105	0/0:17,0:17:48.15:0,48,832	0/0:32,0:32:96.29:0,96,1661	0/0:38,0:38:99:0,111,1835	0/0:30,0:30:90.31:0,90,1638	0/0:13,0:13:30.01:0,30,421
chr10	40841637	.	TA	T	8045.26	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=9.294;DP=588;FS=18.536;HRun=7;HaplotypeScore=158.1571;InbreedingCoeff=0.9964;MQ=66.02;MQ0=5;MQRankSum=-7.493;QD=26.64;ReadPosRankSum=1.961;VQSLOD=2.9885;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,21:21:57.06:568,57,0	0/0:7,0:7:18.06:0,18,226	0/0:29,2:21:38.59:0,39,586	0/0:26,2:13:24.86:0,25,352	0/0:15,0:15:35.97:0,36,399	0/0:29,0:29:69.21:0,69,858	0/0:28,0:28:45.09:0,45,536	1/1:4,31:35:93.21:949,93,0	0/0:20,0:20:42.06:0,42,494	1/1:0,17:17:48.11:488,48,0	1/1:1,18:19:51.11:520,51,0	0/0:22,0:22:60.66:0,61,755	0/0:12,0:12:24.08:0,24,302	0/0:9,0:9:18:0,18,196	1/1:0,24:24:72.16:734,72,0	0/0:12,0:12:24.07:0,24,290	0/0:27,0:27:75.19:0,75,913	1/1:1,23:24:66.15:673,66,0	1/1:3,16:19:45.10:459,45,0	1/1:1,23:24:66.14:673,66,0	1/1:3,20:23:41.73:428,42,0	1/1:3,22:25:63.09:631,63,0	0/0:17,0:17:39.11:0,39,477	0/0:27,0:27:66.20:0,66,811	1/1:1,11:12:36.08:366,36,0	1/1:3,32:35:96.21:979,96,0	1/1:4,11:15:36.07:364,36,0	1/1:0,9:9:21.05:214,21,0
chr10	40841652	.	GACACACACACACAC	G	5780.19	PASS	AB=0.753;AC=35;AF=0.625;AN=56;BaseQRankSum=10.278;DP=570;FS=0.000;HRun=0;HaplotypeScore=282.4227;InbreedingCoeff=0.6287;MQ=59.79;MQ0=27;MQRankSum=-9.638;QD=16.19;ReadPosRankSum=-0.033;VQSLOD=3.1865;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:20:9.03:294,9,0	1/1:2,3:5:6.02:236,6,0	0/0:37,0:18:2.94:0,3,18	0/0:42,0:13:8.93:0,9,64	0/0:14,0:14:36.12:0,36,1538	0/1:16,13:31:9.74:545,0,10	1/1:12,14:27:14.07:173,14,0	0/1:28,0:28:0:0,0,0	0/1:5,1:17:21.69:214,0,22	1/1:16,0:16:12.04:391,12,0	1/1:16,0:16:3.01:98,3,0	0/0:20,0:20:45.06:0,45,1807	1/1:5,0:15:12.16:297,12,0	0/0:7,0:9:24.06:0,24,1178	1/1:20,0:20:24.08:782,24,0	0/0:11,0:11:27.06:0,27,1246	0/0:23,0:34:75.18:0,75,2563	1/1:19,0:19:12.04:391,12,0	1/1:18,0:16:3.01:98,3,0	1/1:22,0:22:9.03:294,9,0	1/1:19,0:19:3.93:12,4,0	1/1:21,0:20:3.01:98,3,0	0/0:16,0:17:40.93:0,41,1945	0/0:26,0:27:57.15:0,57,2945	1/1:14,0:12:9.03:294,9,0	1/1:28,0:28:33.10:1075,33,0	1/1:11,0:11:6.02:196,6,0	1/1:7,0:7:9.03:294,9,0
chr10	40841671	.	ACACACACACACACACACACACACAAAC	A	9037.10	PASS	AB=0.785;AC=15;AF=0.268;AN=56;BaseQRankSum=10.366;DP=521;FS=5.888;HRun=0;HaplotypeScore=353.3974;InbreedingCoeff=-0.1330;MQ=47.97;MQ0=34;MQRankSum=-7.436;QD=46.82;ReadPosRankSum=6.768;VQSLOD=1.9590;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:8,5:11:22.29:576,0,22	0/0:3,0:3:6.02:0,6,170	0/0:25,0:6:16.30:0,16,367	0/0:43,0:9:18.36:0,18,397	0/0:24,0:24:66.68:0,67,5184	0/0:28,0:28:60.20:0,60,1794	0/0:33,0:32:54.26:0,54,1259	0/1:13,0:13:39.47:120,0,39	0/0:18,0:18:33.58:0,34,1375	0/1:10,4:13:35.09:833,0,35	0/1:6,2:8:18.20:186,0,18	0/0:23,0:23:65.81:0,66,5138	0/0:18,0:17:39.13:0,39,1545	0/0:15,0:15:39.13:0,39,3688	0/1:7,9:16:11.92:1545,0,12	0/0:15,0:14:39.13:0,39,3691	0/0:35,0:35:98.15:0,98,7624	0/1:13,4:17:23.32:852,0,23	0/1:12,1:11:61.31:242,0,61	0/1:11,5:16:81.98:572,0,82	0/1:17,0:17:11.37:62,0,11	0/1:7,10:16:54.41:179,0,54	0/0:18,0:18:54.19:0,54,5246	0/0:30,0:29:81.28:0,81,7870	0/1:9,5:11:22.28:573,0,22	1/1:10,11:21:46.41:2306,46,0	0/1:8,2:10:27.54:409,0,28	0/1:1,3:4:4.03:583,0,4
chr10	40841696	.	AAC	A	6004.56	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=6.595;DP=580;FS=0.733;HRun=0;HaplotypeScore=166.7408;InbreedingCoeff=0.9612;MQ=53.57;MQ0=17;MQRankSum=-9.841;QD=24.11;ReadPosRankSum=1.067;VQSLOD=5.5508;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,5:15:8.51:213,9,0	0/0:5,0:5:11.70:0,12,126	0/0:16,0:5:12.04:0,12,175	0/0:25,0:8:14:0,14,220	0/0:20,0:20:44:0,44,713	0/0:30,0:30:56.36:0,56,732	0/0:39,0:38:65.67:0,66,845	1/1:16,8:24:67.95:889,68,0	0/0:23,0:23:37.91:0,38,442	1/1:7,8:14:42.12:506,42,0	1/1:7,6:13:32.80:333,33,0	0/0:23,0:23:59.91:0,60,900	0/0:20,0:20:37.23:0,37,431	0/0:25,0:25:61.44:0,61,914	1/1:9,16:25:58.94:509,59,0	0/0:18,0:17:41.12:0,41,643	0/0:30,0:30:18.07:0,18,496	1/1:10,8:18:45.10:557,45,0	1/1:10,5:15:35.28:436,35,0	1/1:11,4:15:35.88:386,36,0	1/1:0,24:24:24.14:122,24,0	1/1:20,4:24:8.42:409,8,0	0/0:22,0:22:60.13:0,60,899	0/0:34,0:33:96.19:0,96,1500	1/1:8,9:15:29.80:246,30,0	1/1:19,7:26:78.24:969,78,0	1/1:2,12:14:32.90:321,33,0	1/1:3,0:3:9.03:108,9,0
chr10	40843686	.	A	AT	5710.85	PASS	AB=0.716;AC=27;AF=0.482;AN=56;BaseQRankSum=-12.910;DP=518;FS=9.972;HRun=11;HaplotypeScore=59.6466;InbreedingCoeff=0.7534;MQ=74.12;MQ0=1;MQRankSum=-1.209;QD=19.36;ReadPosRankSum=-2.846;VQSLOD=4.4759;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,40:46:75.96:951,76,0	0/0:0,0:5:8.14:0,8,24	0/1:23,0:13:7.87:8,0,61	0/0:19,1:14:3.56:0,4,33	0/0:1,0:18:28.50:0,29,82	0/0:1,0:19:32.59:0,33,94	0/0:7,0:23:30.53:0,31,88	1/1:6,28:34:78.06:744,78,0	0/0:17,0:17:44.79:0,45,346	1/1:3,19:22:36.83:528,37,0	1/1:1,7:9:26.85:244,27,0	0/0:16,0:16:41.83:0,42,325	0/0:10,0:10:29.88:0,30,231	0/0:2,0:12:16.29:0,16,47	1/1:3,11:14:33.07:335,33,0	0/0:3,0:21:9.67:0,10,64	0/0:4,0:28:38.70:0,39,112	0/1:5,17:22:35.79:400,0,36	1/1:7,13:22:7.19:375,7,0	1/1:2,14:17:27.58:413,28,0	1/1:4,9:13:18.04:183,18,0	0/1:2,5:7:5.25:122,0,5	0/0:16,0:16:35.70:0,36,263	0/0:16,0:17:40.88:0,41,308	1/1:1,5:6:12.02:122,12,0	1/1:6,14:20:24.80:409,25,0	1/1:5,26:31:51.83:694,52,0	1/1:1,8:9:18.04:183,18,0
chr10	40844066	.	T	TA	237.64	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-0.125;DP=565;FS=2.570;HRun=9;HaplotypeScore=60.2653;InbreedingCoeff=0.7858;MQ=61.63;MQ0=1;MQRankSum=1.735;QD=19.80;ReadPosRankSum=0.088;VQSLOD=4.0537;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:33:80.96:0,81,699	1/1:1,11:12:30.08:332,30,0	0/0:8,0:7:5.18:0,5,61	0/0:6,0:4:5.96:0,6,47	0/0:16,1:17:11.79:0,12,329	0/0:20,0:20:50.96:0,51,438	0/0:19,0:19:47.63:0,48,409	0/0:21,0:21:50.95:0,51,434	0/0:20,0:20:50.86:0,51,425	0/0:22,0:21:62.99:0,63,547	0/0:25,0:25:71.89:0,72,610	0/0:25,0:25:68.95:0,69,590	0/0:7,0:7:17.99:0,18,156	0/0:16,0:16:44.97:0,45,386	0/0:22,0:23:50.02:0,50,422	0/0:29,0:29:65.97:0,66,573	0/0:34,0:33:71.94:0,72,620	0/0:22,0:22:47.95:0,48,410	0/0:16,0:15:41.98:0,42,365	0/0:34,0:34:80.94:0,81,699	0/0:14,0:14:41.99:0,42,365	0/0:21,0:21:50.96:0,51,437	0/0:20,0:20:41.64:0,42,349	0/0:20,0:20:38.97:0,39,332	0/0:18,0:18:53.93:0,54,458	0/0:19,0:19:47.98:0,48,417	0/0:27,0:27:68.97:0,69,598	0/0:16,0:15:38.99:0,39,338
chr10	40844186	.	T	TG	305.87	PASS	AB=0.801;AC=7;AF=0.125;AN=56;BaseQRankSum=6.795;DP=455;FS=6.516;HRun=0;HaplotypeScore=76.5674;InbreedingCoeff=0.1774;MQ=49.32;MQ0=17;MQRankSum=-2.450;QD=3.44;ReadPosRankSum=1.513;VQSLOD=2.1252;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:27:39.53:0,40,471	0/0:7,0:7:17.75:0,18,158	0/1:15,0:4:18.71:19,0,22	0/1:10,0:3:2.09:2,0,21	0/1:5,6:12:38.70:67,0,39	0/0:17,0:16:34.80:0,35,254	0/0:8,0:6:14.82:0,15,117	0/0:23,0:23:61.16:0,61,640	0/0:12,0:12:35.87:0,36,373	0/0:15,0:13:34.49:0,34,348	0/0:22,0:22:35.63:0,36,358	0/0:10,0:10:23.81:0,24,211	0/0:11,0:11:31.51:0,32,264	1/1:7,6:13:9.63:180,10,0	0/0:17,0:17:44.51:0,45,474	0/1:10,7:17:60.70:61,0,81	0/1:11,9:19:75.20:103,0,75	0/0:25,0:23:44.56:0,45,351	0/0:18,0:18:44.99:0,45,509	0/0:18,0:18:53.93:0,54,577	0/0:12,0:12:32.91:0,33,353	0/0:14,0:12:11.95:0,12,109	0/0:13,0:13:35.88:0,36,348	0/0:24,0:23:32.01:0,32,290	0/0:19,0:19:41.86:0,42,432	0/0:16,0:16:35.19:0,35,404	0/0:19,0:18:44.83:0,45,480	0/0:17,0:12:24.05:0,24,307
chr10	40844464	.	T	TTCTCTCTG	23866.81	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=1.410;DP=647;FS=1.937;HRun=0;HaplotypeScore=151.1783;InbreedingCoeff=0.9685;MQ=75.26;MQ0=4;MQRankSum=-14.773;QD=68.78;ReadPosRankSum=2.051;VQSLOD=5.2549;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,18:32:48.16:2026,48,0	0/0:11,0:11:33.10:0,33,771	0/0:21,0:21:45.97:0,46,658	0/0:27,0:27:60.10:0,60,1317	0/0:9,0:9:27.05:0,27,662	0/0:20,0:20:60.21:0,60,1491	0/0:26,0:26:66.21:0,66,1582	1/1:6,28:47:99:3694,123,0	0/0:26,0:26:69.24:0,69,1819	1/1:1,15:18:51.04:1699,51,0	1/1:4,9:17:18.06:765,18,0	0/0:26,0:26:69.16:0,69,1505	0/0:21,0:21:57.15:0,57,1234	0/0:18,0:18:54.16:0,54,1301	1/1:2,29:33:57.20:2419,57,0	0/0:30,0:30:90.22:0,90,2129	0/0:21,0:21:51.13:0,51,1011	1/1:3,7:14:18.06:765,18,0	1/1:2,18:24:64.09:2216,64,0	1/1:3,21:28:51.17:2166,51,0	1/1:7,7:15:6.02:254,6,0	1/1:3,21:27:48.16:2037,48,0	0/0:16,0:16:39.11:0,39,940	0/0:28,0:28:84.29:0,84,2104	1/1:0,11:18:21.07:893,21,0	1/1:3,22:33:84.25:3021,84,0	1/1:3,18:27:39.61:1656,40,0	1/1:1,8:8:6.02:255,6,0
chr10	40845107	.	AAAAG	A	1098.16	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=1.623;DP=338;FS=0.000;HRun=0;HaplotypeScore=49.0733;InbreedingCoeff=0.7271;MQ=63.42;MQ0=27;MQRankSum=-0.388;QD=18.93;ReadPosRankSum=-0.892;VQSLOD=2.8024;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:22.67:0,23,437	0/0:6,0:5:15.05:0,15,268	0/0:16,0:6:11:0,11,106	0/0:13,0:8:15.23:0,15,126	0/0:12,0:11:30.55:0,31,515	0/0:12,0:11:17.04:0,17,206	0/0:13,0:10:18.69:0,19,156	0/0:21,0:18:35.83:0,36,341	0/0:7,0:6:6:0,6,81	1/1:12,0:12:35.85:319,36,0	1/1:11,2:13:38.81:299,39,0	0/0:11,0:10:19.33:0,19,274	0/0:12,0:11:15:0,15,193	0/0:12,0:11:27.06:0,27,469	0/1:11,0:9:30.01:201,0,30	0/0:5,0:4:12.02:0,12,220	0/0:20,0:20:34.40:0,34,494	1/1:11,1:10:20.13:193,20,0	0/0:15,0:14:30.27:0,30,392	0/0:9,0:7:17.23:0,17,163	0/0:10,0:10:24.41:0,24,252	0/0:1,0:1:1.82:0,2,5	0/0:4,0:4:9.03:0,9,187	0/0:21,0:20:41.65:0,42,537	1/1:9,1:10:29.93:248,30,0	0/0:12,0:11:5.92:0,6,195	0/0:15,0:15:40.29:0,40,365	0/0:11,0:2:6.02:0,6,75
chr10	40845208	.	C	CT	1594.20	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=-6.179;DP=256;FS=6.505;HRun=10;HaplotypeScore=35.0116;InbreedingCoeff=0.7270;MQ=66.39;MQ0=6;MQRankSum=-1.401;QD=14.90;ReadPosRankSum=-1.796;VQSLOD=2.5263;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:10,17:23:33.08:352,33,0	0/1:4,0:4:0:0,0,0	0/0:9,0:6:2.97:0,3,23	0/0:4,0:3:2.97:0,3,20	0/0:2,0:8:12.22:0,12,36	0/0:2,0:6:4.07:0,4,12	0/0:0,0:6:10.19:0,10,29	1/1:7,13:20:41.93:424,42,0	0/0:3,0:5:4.07:0,4,12	0/0:6,0:6:8.97:0,9,74	0/0:7,0:7:8.96:0,9,74	0/0:6,0:6:14.97:0,15,122	0/0:1,0:3:3.99:0,4,12	0/0:5,0:8:9.23:0,9,32	0/0:10,0:9:5.96:0,6,49	0/0:0,0:5:8.48:0,8,26	0/0:5,0:16:16.29:0,16,49	0/0:14,0:13:29.41:0,29,240	1/1:4,7:11:18.04:186,18,0	1/1:2,10:12:26.99:263,27,0	1/1:1,2:3:6.02:64,6,0	1/1:1,3:4:9.02:96,9,0	0/0:4,0:4:2.98:0,3,24	0/0:9,0:9:26.97:0,27,222	0/0:23,0:23:34.67:0,35,399	1/1:5,4:8:12.03:128,12,0	1/1:1,8:9:21.05:224,21,0	1/1:2,4:5:5.85:46,6,0
chr10	40845221	.	A	AT	436.22	PASS	AB=0.833;AC=10;AF=0.185;AN=54;BaseQRankSum=2.535;DP=250;FS=3.630;HRun=11;HaplotypeScore=33.9667;InbreedingCoeff=0.5544;MQ=55.25;MQ0=15;MQRankSum=-1.986;QD=9.69;ReadPosRankSum=1.981;VQSLOD=1.6466;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:18:29.80:0,30,224	1/1:0,3:3:6.01:61,6,0	0/0:5,0:2:2.02:0,2,6	./.	1/1:5,4:9:12.03:122,12,0	0/0:7,0:7:8.97:0,9,70	0/0:7,0:7:2.97:0,3,23	0/0:23,0:20:30.30:0,30,230	0/0:3,0:2:5.98:0,6,46	0/0:6,0:6:11.95:0,12,93	0/0:12,0:12:23.90:0,24,186	0/0:5,0:5:14.94:0,15,116	0/0:3,0:3:5.89:0,6,46	1/1:3,4:6:11.96:100,12,0	0/1:10,0:7:16.84:17,0,37	0/1:2,2:4:34.45:46,0,34	1/1:3,9:11:24.05:243,24,0	0/0:14,0:12:29.39:0,29,231	0/0:11,0:10:23.90:0,24,185	0/0:14,0:14:29.80:0,30,224	0/0:4,0:4:8.05:0,8,44	0/0:6,0:5:11.90:0,12,88	0/0:3,0:3:8.97:0,9,70	0/0:10,0:10:23.89:0,24,186	0/0:21,0:21:40.53:0,41,306	0/0:7,0:6:14.87:0,15,110	0/0:10,0:9:14.92:0,15,114	0/0:8,0:4:8.97:0,9,70
chr10	40845752	.	AAAAGAAAGAAAGAAAG	A	2976.66	PASS	AB=0.750;AC=17;AF=0.304;AN=56;BaseQRankSum=7.506;DP=558;FS=7.560;HRun=0;HaplotypeScore=258.9593;InbreedingCoeff=0.6226;MQ=57.22;MQ0=3;MQRankSum=-8.167;QD=16.82;ReadPosRankSum=-0.311;VQSLOD=1.2134;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:66.20:0,66,2981	0/0:4,0:4:1.25:0,1,3	0/1:10,0:6:0:0,0,0	0/1:14,0:11:0:0,0,0	1/1:5,8:12:6.02:132,6,0	0/1:7,0:23:87.64:249,0,88	0/1:3,0:10:55.29:110,0,55	0/0:19,0:19:17.93:0,18,341	1/1:7,0:19:9.03:335,9,0	0/0:20,0:20:45.14:0,45,2161	0/0:43,0:43:90.22:0,90,3660	0/0:3,0:15:18.06:0,18,777	1/1:3,0:14:18.06:637,18,0	1/1:6,9:15:12.04:525,12,0	0/0:26,0:26:48.03:0,48,2212	1/1:9,8:17:12.04:527,12,0	1/1:11,15:26:21.07:611,21,0	0/0:28,0:28:61.75:0,62,2950	0/0:10,0:10:15.05:0,15,569	0/0:32,0:32:60.19:0,60,2704	0/0:11,0:11:27.03:0,27,797	0/0:33,0:33:75.25:0,75,3450	0/0:10,0:22:33.58:0,34,1163	0/1:4,0:16:28.83:29,0,740	0/0:16,0:16:27.09:0,27,1273	0/0:25,0:25:57.19:0,57,2590	0/0:32,0:32:66.22:0,66,3213	0/0:16,0:16:39.13:0,39,1792
chr10	40846038	.	T	TAA	9291.39	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=1.069;DP=494;FS=0.376;HRun=10;HaplotypeScore=81.7405;InbreedingCoeff=0.9611;MQ=67.54;MQ0=0;MQRankSum=-6.815;QD=32.83;ReadPosRankSum=-2.447;VQSLOD=4.5338;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,12:22:48.11:665,48,0	0/0:7,0:7:21.05:0,21,214	0/0:13,0:12:8.26:0,8,63	0/0:11,0:11:13.51:0,14,149	0/0:20,0:20:30.89:0,31,307	0/0:22,0:23:41.77:0,42,479	0/0:12,0:12:30.07:0,30,303	1/1:15,20:37:87.24:1223,87,0	0/0:17,0:17:36.05:0,36,366	1/1:13,12:26:51.15:709,51,0	1/1:7,14:24:56.10:710,56,0	0/0:7,0:7:21.05:0,21,214	0/0:15,0:15:42.07:0,42,420	0/0:9,0:9:27.04:0,27,267	1/1:6,11:17:40.36:563,40,0	0/0:20,0:20:54.07:0,54,537	0/0:19,0:19:45.05:0,45,449	1/1:5,10:15:5.56:434,6,0	1/1:8,11:20:45.15:664,45,0	1/1:7,18:26:75.19:1043,75,0	1/1:2,2:5:9:112,9,0	1/1:1,15:16:16.45:600,16,0	0/0:20,0:20:54.08:0,54,541	0/0:17,0:17:36.01:0,36,366	1/1:5,8:15:38.52:479,39,0	1/1:9,13:23:56.65:754,57,0	1/1:7,13:21:48.15:690,48,0	1/1:6,10:16:45.13:646,45,0
chr10	40846067	.	G	GA	7518.59	PASS	AB=0.803;AC=32;AF=0.571;AN=56;BaseQRankSum=-2.105;DP=500;FS=7.315;HRun=9;HaplotypeScore=71.5683;InbreedingCoeff=0.8373;MQ=67.77;MQ0=0;MQRankSum=-6.053;QD=22.24;ReadPosRankSum=-2.769;VQSLOD=4.4725;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:5,17:22:54.09:582,54,0	0/0:6,0:6:14.99:0,15,130	0/0:12,0:11:5:0,5,95	0/1:11,0:10:16.59:17,0,18	0/0:19,0:19:44.98:0,45,391	1/1:3,25:28:23.09:711,23,0	1/1:2,12:14:30.08:332,30,0	1/1:11,18:29:31.10:571,31,0	0/0:13,0:14:35.03:0,35,292	1/1:4,18:22:51.14:564,51,0	1/1:6,21:27:57.07:604,57,0	0/0:9,0:9:26.97:0,27,229	0/0:19,0:19:44.97:0,45,390	0/0:11,0:11:32.99:0,33,287	1/1:2,14:16:36.10:398,36,0	0/0:20,0:20:53.98:0,54,469	0/0:13,0:14:23.01:0,23,188	1/1:4,14:18:33.09:365,33,0	1/1:8,12:20:39.10:424,39,0	1/1:4,20:24:51.14:564,51,0	1/1:1,5:6:12.03:133,12,0	0/1:8,14:23:10.17:337,0,10	0/0:22,0:22:47.97:0,48,417	0/0:12,0:16:35.12:0,35,258	1/1:2,10:12:30.04:318,30,0	1/1:9,15:24:46.36:494,46,0	1/1:5,18:23:57.10:608,57,0	1/1:2,16:18:45.12:498,45,0
chr10	40846515	.	AAGG	A	1171.46	PASS	AB=1.000;AC=8;AF=0.148;AN=54;BaseQRankSum=1.496;DP=470;FS=2.288;HRun=0;HaplotypeScore=93.8011;InbreedingCoeff=0.5181;MQ=54.90;MQ0=6;MQRankSum=1.967;QD=13.31;ReadPosRankSum=1.316;VQSLOD=3.4566;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:18:12.89:0,13,100	0/0:14,0:14:39.08:0,39,600	0/0:22,0:9:14.80:0,15,138	0/0:14,0:8:7.87:0,8,135	0/0:37,0:37:87.23:0,87,1553	1/1:3,21:24:42.14:601,42,0	1/1:3,22:25:47.94:641,48,0	0/0:9,0:8:8.90:0,9,94	0/0:24,0:24:63.19:0,63,1199	0/0:13,0:12:15.44:0,15,184	1/1:8,0:8:0.62:7,1,0	0/0:20,0:20:54.16:0,54,983	0/0:20,0:20:39.11:0,39,699	0/0:22,0:22:60.16:0,60,983	0/0:11,0:11:9.69:0,10,72	0/0:19,0:19:51.16:0,51,956	0/0:36,0:36:96.25:0,96,1717	0/1:11,0:10:3.60:4,0,91	0/0:9,0:7:9.50:0,10,124	./.	0/0:12,0:12:8.80:0,9,57	0/1:20,0:20:52.11:52,0,94	0/0:16,0:16:38.86:0,39,673	0/0:27,0:27:78.18:0,78,1441	0/0:9,0:8:5.67:0,6,59	0/0:11,0:10:19.49:0,19,167	0/0:7,0:7:8.59:0,9,56	0/0:6,0:6:4.24:0,4,28
chr10	40846535	.	GGAA	G	1816.23	PASS	AB=0.948;AC=26;AF=0.464;AN=56;BaseQRankSum=5.932;DP=531;FS=6.969;HRun=0;HaplotypeScore=100.4789;InbreedingCoeff=0.4875;MQ=57.62;MQ0=7;MQRankSum=-1.344;QD=7.90;ReadPosRankSum=-4.693;VQSLOD=-0.0825;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:17:17.37:212,17,0	0/0:13,0:13:33.04:0,33,661	0/0:24,0:11:33.03:0,33,377	0/0:14,0:8:10.96:0,11,269	0/0:31,0:31:87.15:0,87,1764	0/1:29,0:29:98.98:180,0,99	0/1:33,0:33:99:166,0,167	1/1:18,0:15:1.23:273,1,0	0/0:23,0:23:66.21:0,66,1411	0/1:6,5:10:33.06:33,0,68	1/1:10,0:10:20.73:153,21,0	0/0:22,0:22:63.15:0,63,1174	0/0:21,0:21:60.12:0,60,1038	0/0:28,0:28:83.86:0,84,1269	1/1:13,0:13:13.44:161,13,0	0/0:27,0:27:78:0,78,1318	0/0:40,0:40:99:0,117,2207	1/1:13,0:12:13.67:122,14,0	0/1:12,0:10:39.97:68,0,40	1/1:4,0:4:3:25,3,0	1/1:16,0:16:19.71:136,20,0	0/1:15,0:15:9.16:102,0,9	0/0:18,0:18:54.13:0,54,940	0/0:39,0:39:99:0,104,1912	1/1:8,0:7:7.29:53,7,0	0/1:17,0:16:8.67:183,0,9	1/1:7,0:6:7.72:56,8,0	1/1:6,0:6:11.82:92,12,0
chr10	40847462	.	TA	T	95.69	PASS	AC=4;AF=0.074;AN=54;BaseQRankSum=3.201;DP=298;FS=1.576;HRun=8;HaplotypeScore=28.9104;InbreedingCoeff=0.6714;MQ=65.20;MQ0=14;MQRankSum=1.000;QD=8.70;ReadPosRankSum=2.014;VQSLOD=-0.0764;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:13:36.09:0,36,422	0/0:4,0:4:9.03:0,9,109	0/0:8,0:4:7.57:0,8,73	0/0:11,0:10:16.30:0,16,160	0/0:10,0:10:27.02:0,27,308	0/0:25,0:24:63.18:0,63,749	0/0:5,0:3:9.02:0,9,97	0/0:36,0:34:96:0,96,1051	1/1:0,3:3:9.01:87,9,0	0/0:7,0:6:12.04:0,12,145	0/0:8,0:7:18.06:0,18,217	0/0:7,0:6:18.03:0,18,194	1/1:0,7:8:12.02:116,12,0	0/0:8,0:7:15.05:0,15,181	0/0:5,0:5:15.05:0,15,181	0/0:6,0:5:12.02:0,12,133	0/0:31,0:30:78.24:0,78,942	0/0:17,0:15:39.08:0,39,454	0/0:19,0:13:36.10:0,36,427	0/0:3,0:3:6.02:0,6,72	0/0:7,0:6:18.04:0,18,205	./.	0/0:3,0:3:6.02:0,6,67	0/0:2,0:1:3.01:0,3,36	0/0:9,0:9:27.06:0,27,304	0/0:11,0:10:27.08:0,27,316	0/0:8,0:7:18.05:0,18,216	0/0:21,0:20:51.16:0,51,616
chr10	40847872	.	GCTGTCTCTGTCT	G	1050.41	PASS	AB=0.714;AC=9;AF=0.161;AN=56;BaseQRankSum=2.908;DP=758;FS=9.656;HRun=0;HaplotypeScore=273.8104;InbreedingCoeff=0.6871;MQ=69.08;MQ0=16;MQRankSum=-1.635;QD=12.07;ReadPosRankSum=-0.835;VQSLOD=0.9576;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:39:66.23:0,66,3734	0/0:10,0:10:21.07:0,21,627	0/0:46,0:27:8.95:0,9,106	0/0:45,0:26:8.39:0,8,111	0/0:19,0:23:5.68:0,6,237	0/0:3,0:24:2.16:0,2,98	0/0:30,0:30:2.25:0,2,174	0/0:30,0:28:12.04:0,12,484	0/0:27,0:24:27.09:0,27,894	1/1:9,8:17:23.20:686,23,0	0/1:6,4:10:0:0,0,0	0/0:30,0:30:63.22:0,63,3633	0/0:27,0:26:30.10:0,30,720	0/0:10,0:19:5.67:0,6,157	1/1:8,18:26:3.01:103,3,0	0/0:26,0:41:27.08:0,27,1146	0/0:26,0:35:24.08:0,24,1015	1/1:15,3:18:9:192,9,0	0/0:20,0:20:15.05:0,15,850	0/0:14,0:14:21.07:0,21,1078	0/0:34,0:34:48.16:0,48,2527	0/0:20,0:18:30.10:0,30,1259	0/0:17,0:17:30.10:0,30,1414	0/0:50,0:50:84.29:0,84,4348	1/1:8,8:16:6.02:205,6,0	0/0:27,0:27:14.13:0,14,1855	0/0:35,0:35:78.23:0,78,3800	0/0:26,0:26:36.12:0,36,1943
chr10	40847875	.	G	GTCTC	1836.88	PASS	AB=0.934;AC=10;AF=0.179;AN=56;BaseQRankSum=7.753;DP=776;FS=4.621;HRun=0;HaplotypeScore=188.4322;InbreedingCoeff=0.2870;MQ=67.37;MQ0=19;MQRankSum=-3.933;QD=8.43;ReadPosRankSum=0.502;VQSLOD=2.7998;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:42:99:0,102,1728	0/1:10,0:10:1.64:2,0,68	0/0:45,0:26:72.22:0,72,1221	0/0:44,0:25:45.94:0,46,798	0/0:25,0:23:33.04:0,33,463	0/1:25,0:25:18.97:52,0,19	0/1:11,20:32:34.63:144,0,35	0/0:34,0:32:81.05:0,81,1209	1/1:22,4:24:36.12:723,36,0	0/0:17,0:17:31.34:0,31,436	0/0:9,0:9:8.98:0,9,128	0/0:33,0:33:87.28:0,87,1547	1/1:23,5:27:48.16:834,48,0	0/1:19,0:19:54.64:55,0,239	0/0:25,0:25:15.05:0,15,248	0/1:41,0:41:99:120,0,886	0/1:36,0:36:59.60:60,0,735	0/0:18,0:18:45.15:0,45,777	0/0:21,0:19:48.16:0,48,855	0/0:15,0:15:44.85:0,45,696	0/0:34,0:34:87.26:0,87,1494	0/0:21,0:19:47.91:0,48,738	0/0:18,0:18:51.13:0,51,829	0/0:50,0:50:99:0,132,2351	0/0:15,0:15:15.05:0,15,229	0/0:27,0:27:69.23:0,69,1218	0/0:38,0:38:99:0,108,1863	0/0:26,0:26:72.17:0,72,1167
chr10	40847879	.	CTG	C	1215.32	PASS	AB=1.000;AC=8;AF=0.143;AN=56;BaseQRankSum=9.458;DP=789;FS=3.644;HRun=0;HaplotypeScore=164.6764;InbreedingCoeff=0.7170;MQ=64.44;MQ0=22;MQRankSum=-2.424;QD=12.93;ReadPosRankSum=3.495;VQSLOD=3.7296;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:44:99:0,126,2145	1/1:0,11:11:21.07:321,21,0	0/0:44,0:25:75.19:0,75,1241	0/0:43,0:23:45.94:0,46,803	0/0:25,0:23:38.72:0,39,566	0/0:25,0:25:8.46:0,8,130	0/0:32,0:32:13.64:0,14,211	0/0:37,0:34:96.19:0,96,1512	1/1:12,15:24:32.25:374,32,0	0/1:15,0:15:7.99:8,0,257	0/0:9,0:9:9:0,9,128	0/0:33,0:33:96.30:0,96,1761	1/1:10,18:27:20.88:656,21,0	0/0:20,0:20:21.07:0,21,348	0/0:24,0:24:6.83:0,7,206	0/0:40,0:40:69.21:0,69,1146	0/0:35,0:35:59.76:0,60,988	0/0:18,0:18:36.94:0,37,738	0/0:23,0:19:51.17:0,51,922	0/0:20,0:20:60.10:0,60,913	0/0:39,0:37:99:0,111,1850	0/0:21,0:19:57.16:0,57,953	0/0:20,0:20:57.13:0,57,938	0/0:51,0:51:99:0,141,2497	0/1:13,0:13:1.40:1,0,147	0/0:27,0:27:81.22:0,81,1411	0/0:40,0:40:99:0,120,2100	0/0:24,0:24:72.17:0,72,1199
chr10	40847922	.	TGTGTGCGTGCACGA	T	2036.30	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.790;DP=845;FS=4.811;HRun=0;HaplotypeScore=370.2158;InbreedingCoeff=0.9965;MQ=57.70;MQ0=6;MQRankSum=-6.547;QD=38.42;ReadPosRankSum=2.091;VQSLOD=2.0941;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:60,0:60:99:0,160,8650	0/0:19,0:19:51.18:0,51,3019	0/0:36,0:26:70.64:0,71,2663	0/0:37,0:32:87.30:0,87,4358	0/0:28,0:28:59.56:0,60,3327	0/0:23,0:23:44.81:0,45,2884	0/0:32,0:32:49.95:0,50,3410	0/0:33,0:31:66.23:0,66,3892	1/1:14,11:25:21.07:782,21,0	0/0:29,0:28:84.29:0,84,4662	0/0:21,0:21:48.16:0,48,3079	0/0:36,0:36:99:0,99,5744	1/1:16,12:28:35.63:1374,36,0	0/0:31,0:31:57.80:0,58,3762	0/0:37,0:37:51.18:0,51,3274	0/0:39,0:39:70.17:0,70,4353	0/0:27,0:27:47.71:0,48,2820	0/0:16,0:16:39.09:0,39,2172	0/0:27,0:25:68.45:0,68,3557	0/0:26,0:26:72.23:0,72,4285	0/0:39,0:37:96.33:0,96,5798	0/0:32,0:32:90.31:0,90,5087	0/0:18,0:18:36.12:0,36,2063	0/0:45,0:45:99:0,117,6529	0/0:16,0:16:24.08:0,24,1334	0/0:36,0:36:99:0,105,6772	0/0:37,0:37:90.31:0,90,5306	0/0:12,0:12:33.11:0,33,1850
chr10	40847926	.	TG	T	123.07	PASS	AB=0.788;AC=3;AF=0.054;AN=56;BaseQRankSum=7.378;DP=828;FS=4.674;HRun=1;HaplotypeScore=182.8529;InbreedingCoeff=0.6926;MQ=58.44;MQ0=5;MQRankSum=-6.911;QD=2.46;ReadPosRankSum=2.300;VQSLOD=-0.1863;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:63,0:63:99:0,178,2804	0/0:19,0:19:54.18:0,54,856	0/0:38,0:28:82.06:0,82,1165	0/0:39,0:33:93.09:0,93,1365	0/0:27,0:27:62.94:0,63,999	0/0:22,0:22:44.89:0,45,719	0/0:26,0:26:51.17:0,51,816	0/0:34,0:32:93.23:0,93,1393	1/1:16,8:24:18.98:104,19,0	0/0:30,0:29:87.29:0,87,1335	0/0:21,0:21:48.16:0,48,767	0/0:35,0:35:99:0,102,1630	0/1:19,7:26:8.94:123,0,9	0/0:27,0:27:60.19:0,60,928	0/0:36,0:36:51.17:0,51,805	0/0:35,0:35:69.23:0,69,1094	0/0:25,0:25:48.15:0,48,734	0/0:16,0:16:39.13:0,39,606	0/0:25,0:25:75.25:0,75,1160	0/0:27,0:27:78.27:0,78,1233	0/0:37,0:35:99:0,102,1615	0/0:33,0:33:96.28:0,96,1480	0/0:16,0:16:42.14:0,42,661	0/0:44,0:44:99:0,126,2000	0/0:18,0:18:30.10:0,30,444	0/0:39,0:39:99:0,117,1837	0/0:34,0:34:96.31:0,96,1504	0/0:12,0:12:36.11:0,36,551
chr10	40847930	.	TGCACGA	T	838.70	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.315;DP=835;FS=6.018;HRun=0;HaplotypeScore=256.0791;InbreedingCoeff=0.9975;MQ=59.58;MQ0=3;MQRankSum=-6.477;QD=17.47;ReadPosRankSum=1.585;VQSLOD=2.2206;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:61,0:61:99:0,172,5741	0/0:19,0:19:54.19:0,54,1933	0/0:38,0:32:88.69:0,89,2615	0/0:41,0:36:99:0,99,3289	0/0:27,0:27:65.91:0,66,2118	0/0:23,0:23:48.12:0,48,1669	0/0:25,0:25:51.18:0,51,1868	0/0:33,0:32:90.31:0,90,3117	1/1:16,7:23:21.07:359,21,0	0/0:29,0:29:87.30:0,87,2968	0/0:21,0:21:48.16:0,48,1744	0/0:34,0:34:99:0,99,3416	1/1:18,7:25:35.85:600,36,0	0/0:27,0:27:59.87:0,60,2191	0/0:37,0:37:54.19:0,54,1896	0/0:37,0:37:75.26:0,75,2571	0/0:26,0:26:57.19:0,57,1884	0/0:16,0:16:42.10:0,42,1381	0/0:25,0:25:74.47:0,74,2492	0/0:27,0:27:78.25:0,78,2705	0/0:36,0:36:99:0,108,3739	0/0:34,0:34:96.33:0,96,3323	0/0:15,0:15:39.13:0,39,1373	0/0:49,0:49:99:0,141,4689	0/0:19,0:19:33.11:0,33,1095	0/0:39,0:39:99:0,117,4167	0/0:36,0:36:99:0,102,3504	0/0:11,0:11:33.11:0,33,1111
chr10	40848053	.	TCA	T	2469.85	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.075;DP=768;FS=9.282;HRun=0;HaplotypeScore=93.6176;InbreedingCoeff=1.0000;MQ=83.52;MQ0=1;MQRankSum=-3.643;QD=40.49;ReadPosRankSum=1.596;VQSLOD=5.4527;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,157,3064	0/0:14,0:14:42.12:0,42,802	0/0:32,0:32:93.32:0,93,1861	0/0:15,0:15:40.89:0,41,651	0/0:27,0:27:81.26:0,81,1582	0/0:23,0:23:69.24:0,69,1400	0/0:36,0:36:99:0,108,2084	0/0:28,0:28:84.28:0,84,1660	1/1:0,33:33:93.32:1516,93,0	0/0:28,0:28:84.28:0,84,1659	0/0:22,0:22:66.23:0,66,1322	0/0:30,0:30:90.31:0,90,1806	1/1:0,28:27:66.23:1075,66,0	0/0:20,0:20:60.19:0,60,1181	0/0:29,0:29:84.27:0,84,1662	0/0:19,0:19:57.18:0,57,1121	0/0:41,0:41:99:0,123,2424	0/0:22,0:22:66.23:0,66,1340	0/0:22,0:22:66.19:0,66,1202	0/0:25,0:25:72.23:0,72,1389	0/0:28,0:28:84.29:0,84,1694	0/0:33,0:33:99:0,99,1914	0/0:29,0:29:84.27:0,84,1656	0/0:32,0:32:96.31:0,96,1901	0/0:17,0:17:51.17:0,51,1015	0/0:34,0:34:99:0,102,2038	0/0:28,0:28:84.29:0,84,1652	0/0:20,0:20:60.18:0,60,1180
chr10	40848839	.	TCTTC	T	4891.33	PASS	AB=0.799;AC=11;AF=0.196;AN=56;BaseQRankSum=13.537;DP=759;FS=11.285;HRun=0;HaplotypeScore=215.2079;InbreedingCoeff=-0.2541;MQ=47.40;MQ0=20;MQRankSum=-12.875;QD=15.10;ReadPosRankSum=0.970;VQSLOD=3.1786;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:18,9:27:99:494,0,443	0/0:9,0:9:15.33:0,15,151	0/0:24,0:5:15.05:0,15,295	0/0:35,0:4:11.60:0,12,155	0/0:27,0:27:81.28:0,81,1959	0/0:26,0:26:14.50:0,14,236	0/0:28,0:28:7.05:0,7,307	0/1:20,19:37:99:781,0,503	0/0:28,0:28:23.32:0,23,430	0/0:39,0:37:32.70:0,33,1157	0/0:20,0:20:39.78:0,40,583	0/0:25,0:25:75.23:0,75,1827	0/0:18,0:18:17.43:0,17,412	0/0:26,0:26:78.27:0,78,1713	0/1:47,0:46:51.11:51,0,1295	0/0:21,0:21:63.20:0,63,1498	0/0:23,0:22:62.98:0,63,1624	0/1:21,0:20:45.16:45,0,294	0/1:33,6:30:99:321,0,772	0/1:14,10:24:99:545,0,490	0/1:16,3:18:99:294,0,241	0/1:20,20:40:99:1087,0,587	0/0:19,0:19:57.18:0,57,1450	0/0:47,0:47:99:0,138,3478	0/0:19,0:19:30.61:0,31,636	0/1:22,12:33:99:653,0,975	0/1:16,10:26:99:524,0,626	0/1:6,2:8:95.49:95,0,232
chr10	40848843	.	CCCTT	C	2990.14	PASS	AB=1.000;AC=16;AF=0.286;AN=56;BaseQRankSum=7.876;DP=767;FS=4.271;HRun=0;HaplotypeScore=231.4864;InbreedingCoeff=0.2392;MQ=46.91;MQ0=21;MQRankSum=-6.448;QD=9.37;ReadPosRankSum=1.140;VQSLOD=2.7713;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:27:3.42:143,3,0	1/1:2,7:9:15.05:242,15,0	0/0:27,0:5:12.04:0,12,288	0/0:38,0:6:9.50:0,10,203	0/0:27,0:27:57.20:0,57,1377	1/1:4,21:25:57.19:920,57,0	1/1:6,22:28:47.95:775,48,0	0/1:39,0:37:44.39:44,0,149	0/0:9,0:31:16.30:0,16,238	0/0:40,0:38:62.22:0,62,560	0/0:16,0:16:24.81:0,25,176	0/0:25,0:25:69.19:0,69,1527	0/0:8,0:17:9.03:0,9,146	0/0:26,0:26:45.15:0,45,1002	0/0:48,0:47:17.21:0,17,463	0/0:23,0:23:52.06:0,52,1208	0/0:25,0:24:60.21:0,60,1426	0/0:20,0:19:13.75:0,14,121	0/1:39,0:29:70.64:71,0,244	0/1:22,0:22:49.04:189,0,49	0/1:20,0:19:71.29:71,0,78	0/1:41,0:41:87.14:363,0,87	0/0:20,0:20:54.19:0,54,1232	0/0:46,0:46:99:0,114,2714	0/0:19,0:19:29.55:0,30,199	0/1:34,0:33:99:169,0,376	0/1:29,0:29:99:149,0,169	0/1:6,0:6:30.91:31,0,32
chr10	40848877	.	T	TTTCC	14913.54	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=11.485;DP=756;FS=6.381;HRun=0;HaplotypeScore=212.9304;InbreedingCoeff=0.9816;MQ=52.07;MQ0=8;MQRankSum=-14.082;QD=39.45;ReadPosRankSum=-4.476;VQSLOD=3.3355;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,16:25:45.07:987,45,0	0/0:7,0:7:18.05:0,18,281	0/0:31,0:16:40.97:0,41,600	0/0:32,0:19:38.32:0,38,586	0/0:25,0:25:57.19:0,57,991	0/0:24,0:24:60.09:0,60,970	0/0:30,0:30:57.17:0,57,925	1/1:10,6:16:24.08:600,24,0	0/0:30,0:30:48.16:0,48,832	1/1:15,17:32:57.20:1424,57,0	1/1:6,10:16:27.09:608,27,0	0/0:26,0:26:60.19:0,60,1016	0/0:13,0:13:15.05:0,15,258	0/0:22,0:22:60.19:0,60,1016	1/1:23,23:45:78.27:1808,78,0	0/0:29,0:29:75.25:0,75,1304	0/0:31,0:30:78.27:0,78,1341	1/1:5,23:29:39.13:976,39,0	1/1:16,10:25:43.70:998,44,0	1/1:8,14:22:45.15:1057,45,0	1/1:5,17:23:27.02:565,27,0	1/1:21,22:43:76.20:1706,76,0	0/0:22,0:22:66.16:0,66,1107	0/0:55,0:55:99:0,144,2475	1/1:12,10:21:25.25:707,25,0	1/1:20,19:38:80.17:1693,80,0	1/1:16,17:33:69.71:1644,70,0	1/1:2,2:4:6.02:140,6,0
chr10	40851388	.	GGTGT	G	2741.85	PASS	AB=0.784;AC=33;AF=0.635;AN=52;BaseQRankSum=6.830;DP=537;FS=9.042;HRun=0;HaplotypeScore=111.9385;InbreedingCoeff=0.6592;MQ=58.52;MQ0=14;MQRankSum=-4.283;QD=7.66;ReadPosRankSum=1.488;VQSLOD=1.9928;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:17,12:27:18:282,18,0	0/0:6,0:7:12.01:0,12,153	./.	./.	1/1:10,0:19:16.57:144,17,0	0/0:14,0:14:24.08:0,24,557	0/0:24,0:26:26.56:0,27,498	1/1:26,5:31:6.53:112,7,0	0/0:9,0:18:15.05:0,15,274	1/1:10,0:25:29.24:253,29,0	1/1:8,0:21:18.02:168,18,0	0/0:14,0:15:14.77:0,15,248	0/0:8,0:11:12.25:0,12,200	1/1:8,0:15:18.02:168,18,0	0/1:12,0:20:17.66:161,0,18	1/1:10,0:17:21.02:195,21,0	1/1:13,0:16:3:28,3,0	1/1:11,0:14:8.97:76,9,0	0/1:22,2:21:7.62:86,0,8	1/1:14,8:22:15.01:208,15,0	1/1:20,0:20:2.87:15,3,0	1/1:7,10:17:15:235,15,0	0/0:15,0:15:29.82:0,30,520	0/0:20,0:19:27.09:0,27,615	1/1:11,0:17:15.02:140,15,0	1/1:11,7:16:18.04:259,18,0	1/1:11,8:17:17.95:282,18,0	0/1:6,3:8:60.57:126,0,61
chr10	40851580	.	ACTCAGACC	A	17265.02	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=16.424;DP=515;FS=1.935;HRun=0;HaplotypeScore=162.6579;InbreedingCoeff=0.9928;MQ=67.85;MQ0=1;MQRankSum=-17.507;QD=70.18;ReadPosRankSum=0.519;VQSLOD=4.9760;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,28:36:78.27:2161,78,0	0/0:5,0:5:15.05:0,15,478	0/0:22,0:22:63.22:0,63,2406	0/0:26,0:25:75.26:0,75,3107	0/0:12,0:12:36.12:0,36,1594	0/0:24,0:24:66.23:0,66,2917	0/0:23,0:23:63.20:0,63,2520	1/1:7,23:30:69.22:1893,69,0	0/0:19,0:19:51.17:0,51,2233	1/1:2,13:15:42.14:1167,42,0	1/1:3,12:15:36.12:996,36,0	0/0:22,0:22:60.21:0,60,2513	0/0:18,0:18:54.19:0,54,2364	0/0:16,0:16:45.15:0,45,1936	1/1:2,21:23:63.22:1782,63,0	0/0:14,0:14:39.13:0,39,1717	0/0:27,0:27:81.28:0,81,3397	1/1:2,7:9:21.07:594,21,0	1/1:2,11:12:33.11:934,33,0	1/1:1,16:17:48.16:1355,48,0	1/1:4,20:24:51.13:1375,51,0	1/1:2,11:13:36.12:907,36,0	0/0:20,0:20:60.21:0,60,2538	0/0:21,0:21:54.19:0,54,2237	1/1:0,9:9:27.09:764,27,0	1/1:2,15:17:51.18:1386,51,0	1/1:2,19:20:57.20:1611,57,0	1/1:0,4:4:12.04:340,12,0
chr10	40851657	.	TG	T	7325.18	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=13.242;DP=605;FS=2.268;HRun=8;HaplotypeScore=115.7024;InbreedingCoeff=0.9928;MQ=72.99;MQ0=0;MQRankSum=-4.964;QD=22.68;ReadPosRankSum=1.628;VQSLOD=4.2143;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,42:50:99:956,99,0	0/0:7,0:7:15.05:0,15,181	0/0:16,0:16:41.98:0,42,464	0/0:14,0:14:36.11:0,36,428	0/0:21,0:21:54.15:0,54,640	0/0:1,0:17:43.09:0,43,219	0/0:4,0:25:66.50:0,67,378	1/1:4,15:19:45.06:435,45,0	0/0:24,0:23:60.18:0,60,722	1/1:5,17:22:54.08:521,54,0	1/1:3,8:11:21.03:203,21,0	0/0:26,0:26:66.17:0,66,763	0/0:23,0:23:60.17:0,60,714	0/0:32,0:32:90.27:0,90,1077	1/1:6,23:29:69.10:666,69,0	0/0:19,0:19:57.16:0,57,677	0/0:27,0:27:75.20:0,75,892	1/1:0,19:19:57.09:550,57,0	1/1:4,12:16:33.04:319,33,0	1/1:5,13:18:27.04:259,27,0	1/1:1,29:30:69.11:666,69,0	1/1:3,25:28:63.10:608,63,0	0/0:14,0:15:41.99:0,42,486	0/0:16,0:16:45.13:0,45,533	1/1:2,15:17:45.07:434,45,0	1/1:4,32:36:99:956,99,0	1/1:1,22:23:66.11:637,66,0	1/1:0,5:5:12.02:116,12,0
chr10	40852161	.	CGATCATTTTACAGGAGAGGG	C	12459.87	PASS	AB=0.895;AC=27;AF=0.482;AN=56;BaseQRankSum=13.540;DP=536;FS=3.443;HRun=0;HaplotypeScore=280.8989;InbreedingCoeff=0.8914;MQ=80.54;MQ0=1;MQRankSum=-10.048;QD=51.28;ReadPosRankSum=2.461;VQSLOD=3.9896;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:12,20:32:33.11:1441,33,0	0/0:12,0:12:33.08:0,33,2253	0/0:29,0:27:42.14:0,42,2095	0/0:19,0:17:30.99:0,31,1690	0/0:20,0:20:49.41:0,49,4128	0/0:23,0:23:54.16:0,54,4084	0/0:23,0:23:60.21:0,60,5147	1/1:17,4:21:12.03:188,12,0	0/0:23,0:23:45.15:0,45,3353	1/1:9,8:17:27.09:1342,27,0	1/1:6,5:11:12.04:534,12,0	0/0:26,0:26:54.19:0,54,4266	0/0:21,0:21:42.14:0,42,3586	0/0:20,0:20:33.10:0,33,2651	1/1:7,9:16:27.09:1319,27,0	0/0:18,0:18:51.18:0,51,3812	0/0:27,0:27:66.23:0,66,5286	0/1:15,2:17:99:156,0,276	1/1:13,11:24:32.87:1133,33,0	1/1:5,6:11:15.05:596,15,0	1/1:10,5:15:6.02:256,6,0	1/1:6,6:12:15.05:678,15,0	0/0:13,0:13:24.08:0,24,1800	0/0:19,0:19:48.16:0,48,4041	1/1:6,8:14:18.06:969,18,0	1/1:12,11:23:36.11:1587,36,0	1/1:10,12:22:33.11:1777,33,0	1/1:3,5:8:9.03:485,9,0
chr10	40852478	.	C	CTT	9453.44	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-1.965;DP=456;FS=104.622;HRun=0;HaplotypeScore=69.7441;InbreedingCoeff=0.9530;MQ=69.69;MQ0=2;MQRankSum=-0.330;QD=33.40;ReadPosRankSum=9.795;VQSLOD=1.7176;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,31:32:81.25:1369,81,0	0/0:5,0:5:9.03:0,9,136	0/0:17,0:13:23.06:0,23,248	0/0:11,0:7:11.98:0,12,106	0/0:8,0:8:6.49:0,6,91	0/0:9,0:9:12.03:0,12,151	0/0:10,0:10:27.07:0,27,344	1/1:0,21:21:57.19:940,57,0	0/0:11,0:11:26.82:0,27,265	1/1:0,0:18:53.33:487,53,0	1/1:0,0:8:20.97:196,21,0	0/0:18,0:18:40.37:0,40,563	0/0:10,0:10:29.28:0,29,355	0/0:15,0:15:36.11:0,36,543	1/1:0,0:29:66.13:674,66,0	0/0:17,0:17:33.09:0,33,442	0/0:20,0:20:44.64:0,45,588	1/1:0,0:26:60.13:617,60,0	1/1:2,12:16:36.04:542,36,0	1/1:1,13:14:31.88:473,32,0	1/1:2,39:44:87.03:1475,87,0	1/1:0,14:15:39.09:631,39,0	0/0:6,0:6:8.97:0,9,115	0/0:16,0:16:31.14:0,31,433	1/1:1,1:16:41.71:408,42,0	1/1:0,15:18:51.05:723,51,0	1/1:0,17:18:48.12:766,48,0	1/1:0,7:7:9.03:152,9,0
chr10	40854100	.	ACACACACACACACACGCGCGCGCGCGCG	A	8207.71	PASS	AB=0.991;AC=14;AF=0.250;AN=56;BaseQRankSum=8.108;DP=671;FS=13.307;HRun=0;HaplotypeScore=428.4708;InbreedingCoeff=0.3041;MQ=43.70;MQ0=11;MQRankSum=-9.574;QD=33.78;ReadPosRankSum=-1.843;VQSLOD=1.7057;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:24:14.11:0,14,516	0/0:5,0:5:3.01:0,3,184	0/0:10,0:3:6.02:0,6,141	0/0:11,0:7:15.05:0,15,383	0/0:20,0:20:10.08:0,10,338	0/0:26,0:26:42.13:0,42,1828	0/0:31,0:31:29.13:0,29,1244	0/1:33,0:32:99:860,0,1495	0/0:17,0:17:28.90:0,29,1827	1/1:38,1:39:9.20:2180,9,0	1/1:19,0:18:5.69:136,6,0	0/0:22,0:21:42.14:0,42,3109	0/0:16,0:16:32.59:0,33,1506	0/0:35,0:35:18.84:0,19,1259	0/1:34,2:36:22.04:2019,0,22	0/0:21,0:20:9.10:0,9,972	0/0:25,0:25:47.95:0,48,1344	1/1:16,0:16:5.99:188,6,0	0/1:14,0:13:99:325,0,654	0/0:25,0:25:29.05:0,29,841	0/0:53,0:48:24.33:0,24,763	0/0:30,0:30:8.96:0,9,146	0/0:18,0:18:39.13:0,39,2873	0/0:38,0:38:99:0,108,9326	1/1:17,3:20:27.09:1147,27,0	0/1:33,0:33:99:737,0,1736	0/1:21,0:20:99:546,0,766	0/1:12,0:10:69.04:69,0,668
chr10	40854102	.	ACACACACACACACGCGCGCGCGCGCG	A	10179.25	PASS	AB=0.995;AC=16;AF=0.286;AN=56;BaseQRankSum=7.226;DP=656;FS=13.177;HRun=0;HaplotypeScore=393.8573;InbreedingCoeff=0.3511;MQ=43.71;MQ0=10;MQRankSum=-8.508;QD=37.84;ReadPosRankSum=-1.497;VQSLOD=1.9848;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:24:14.14:0,14,447	0/0:5,0:5:3.01:0,3,161	0/0:8,0:3:6:0,6,105	0/0:8,0:5:12.04:0,12,319	0/0:20,0:20:10.71:0,11,312	0/0:29,0:29:39.12:0,39,1648	0/0:31,0:31:28.77:0,29,1183	0/1:32,0:31:99:1099,0,1297	0/0:16,0:16:25.35:0,25,1578	1/1:7,29:36:60.59:2608,61,0	1/1:6,12:17:3.01:172,3,0	0/0:22,0:21:42.14:0,42,2974	0/0:16,0:16:32.58:0,33,1392	0/1:34,0:34:27.86:28,0,1049	1/1:18,16:34:65.87:2770,66,0	0/0:21,0:20:9.10:0,9,828	0/0:24,0:24:44.96:0,45,1178	1/1:1,14:15:5.99:235,6,0	0/1:14,0:13:99:333,0,541	0/0:23,0:23:29.13:0,29,698	0/0:52,0:47:21.75:0,22,718	0/0:30,0:30:6.63:0,7,150	0/0:18,0:18:42.14:0,42,2816	0/0:39,0:39:99:0,111,9014	1/1:8,12:20:27.09:1344,27,0	0/1:32,1:33:99:925,0,1455	0/1:21,0:20:99:559,0,654	0/1:12,0:10:99:105,0,573
chr10	40854110	.	ACACACGCGCGCGCGCGCG	A	9603.61	PASS	AB=0.987;AC=19;AF=0.352;AN=54;BaseQRankSum=9.294;DP=629;FS=7.411;HRun=0;HaplotypeScore=312.4046;InbreedingCoeff=0.1532;MQ=43.84;MQ0=10;MQRankSum=-8.088;QD=27.05;ReadPosRankSum=2.627;VQSLOD=1.8587;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:22:8.90:0,9,93	0/0:5,0:5:3.01:0,3,136	./.	0/0:6,0:2:6.02:0,6,103	0/0:20,0:20:8.83:0,9,192	0/0:25,0:25:27.25:0,27,849	0/0:30,0:30:24.11:0,24,565	0/1:35,0:34:99:1839,0,269	0/0:16,0:16:26.03:0,26,1298	1/1:31,0:31:45.96:1708,46,0	1/1:17,0:16:3.01:119,3,0	0/0:22,0:21:42.14:0,42,2317	0/0:15,0:15:25.70:0,26,1033	0/1:34,0:34:99:183,0,461	1/1:29,0:29:47.63:1297,48,0	0/0:21,0:20:9.05:0,9,406	0/1:22,0:22:64.53:65,0,434	1/1:15,0:15:5.99:159,6,0	0/1:15,0:14:99:602,0,204	0/1:19,1:20:85.60:86,0,140	0/1:55,1:52:8.61:9,0,101	0/0:29,1:30:3.79:0,4,10	0/0:19,0:19:42.10:0,42,2193	0/0:39,0:39:99:0,108,6395	1/1:17,0:17:24.73:721,25,0	0/1:31,0:31:99:1557,0,364	0/1:19,1:19:99:827,0,123	0/1:13,0:11:99:432,0,124
chr10	40854112	.	ACACGCGCGCGCGCGCG	A	9886.48	PASS	AB=0.869;AC=21;AF=0.389;AN=54;BaseQRankSum=8.231;DP=614;FS=3.406;HRun=0;HaplotypeScore=291.5553;InbreedingCoeff=0.1871;MQ=43.99;MQ0=9;MQRankSum=-8.027;QD=26.43;ReadPosRankSum=2.177;VQSLOD=3.3328;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:18:2.87:0,3,20	0/0:5,0:5:3.01:0,3,132	./.	0/0:5,0:1:3.01:0,3,43	0/0:21,0:21:9.75:0,10,128	0/0:23,0:24:23.59:0,24,643	0/0:29,0:30:23.97:0,24,342	0/1:10,22:31:1.47:1896,0,1	0/0:17,0:17:29.45:0,29,1435	1/1:31,0:31:45.62:1568,46,0	1/1:16,0:16:3.01:119,3,0	0/0:22,0:21:42.11:0,42,2057	0/0:16,0:16:28.84:0,29,969	0/1:34,0:34:99:216,0,264	1/1:29,0:29:32.66:1114,33,0	0/0:21,0:20:8.92:0,9,215	0/1:22,0:22:92.71:93,0,263	1/1:15,0:15:5.99:145,6,0	0/1:8,7:14:72.27:648,0,72	0/1:19,2:21:91.07:163,0,91	0/1:26,27:49:14.14:63,0,14	1/1:28,1:29:4.21:42,4,0	0/0:19,0:19:39.12:0,39,2062	0/0:37,0:38:99:0,108,5615	1/1:17,0:17:19.05:621,19,0	0/1:29,1:30:99:1805,0,109	0/1:19,0:18:18.61:883,0,19	0/1:11,0:9:29.93:513,0,30
chr10	40854114	.	ACGCGCGCGCGCGCG	A	10247.76	PASS	AB=0.643;AC=29;AF=0.558;AN=52;BaseQRankSum=6.347;DP=593;FS=1.629;HRun=0;HaplotypeScore=278.0275;InbreedingCoeff=0.5470;MQ=43.96;MQ0=9;MQRankSum=-7.319;QD=25.88;ReadPosRankSum=0.630;VQSLOD=3.7873;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:2,15:17:0:0,0,0	0/0:4,0:5:3.01:0,3,109	./.	./.	0/0:4,0:21:7.34:0,7,54	0/0:4,0:23:21.41:0,21,426	0/0:12,0:29:18.97:0,19,282	1/1:29,0:28:62.80:1975,63,0	0/0:20,0:20:38.15:0,38,1609	1/1:31,0:31:42.61:1414,43,0	1/1:16,0:16:3.01:119,3,0	0/0:23,0:22:39.12:0,39,1981	0/0:15,0:15:4.80:0,5,819	0/1:10,0:34:36.40:234,0,36	1/1:23,5:28:27.33:1001,27,0	0/1:6,0:20:12.28:12,0,30	0/1:17,0:21:68.69:185,0,69	1/1:14,1:15:5.99:131,6,0	1/1:15,0:14:20.99:648,21,0	0/1:11,9:21:4.39:94,0,4	1/1:45,0:42:6.65:61,7,0	1/1:6,21:27:4.63:132,5,0	0/0:16,0:16:35.08:0,35,1850	0/0:37,0:38:96.33:0,96,5151	1/1:17,0:17:15.05:555,15,0	1/1:8,20:28:57.63:2066,58,0	1/1:7,11:17:27.34:1009,27,0	1/1:6,5:9:15.05:612,15,0
chr10	40855426	.	CGTGT	C	17117.90	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=18.795;DP=766;FS=0.887;HRun=0;HaplotypeScore=156.8863;InbreedingCoeff=0.9920;MQ=75.70;MQ0=0;MQRankSum=-9.582;QD=43.34;ReadPosRankSum=1.906;VQSLOD=5.4644;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,48:52:99:2104,111,0	0/0:14,0:14:42.14:0,42,1050	0/0:18,0:18:42.14:0,42,1051	0/0:21,0:20:51.10:0,51,1132	0/0:22,0:22:66.23:0,66,1713	0/0:19,0:19:51.17:0,51,1368	0/0:34,0:34:99:0,99,2417	1/1:5,24:29:69.22:1205,69,0	0/0:36,0:36:99:0,102,2676	1/1:2,30:32:87.22:1576,87,0	1/1:3,21:24:60.21:1129,60,0	0/0:26,0:26:78.27:0,78,2029	0/0:30,0:30:90.31:0,90,2335	0/0:21,0:21:60.21:0,60,1572	1/1:1,39:40:96.33:1814,96,0	0/0:32,0:32:93.30:0,93,2399	0/0:39,0:39:99:0,117,2962	1/1:1,21:22:42.14:797,42,0	1/1:3,10:13:30.10:519,30,0	1/1:1,22:23:60.20:1112,60,0	1/1:6,49:55:99:2089,111,0	1/1:0,22:22:45.15:853,45,0	0/0:27,0:27:78.27:0,78,1972	0/0:32,0:32:96.28:0,96,2344	1/1:0,19:19:57.13:1041,57,0	1/1:2,29:31:81.24:1477,81,0	1/1:2,28:30:66.12:1233,66,0	1/1:0,3:3:9.03:171,9,0
chr10	40856457	.	GCT	G	9251.93	PASS	AB=0.669;AC=15;AF=0.268;AN=56;BaseQRankSum=8.987;DP=826;FS=2.364;HRun=0;HaplotypeScore=200.4475;InbreedingCoeff=-0.3688;MQ=63.61;MQ0=6;MQRankSum=2.553;QD=18.18;ReadPosRankSum=5.082;VQSLOD=5.0830;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:22,27:45:99:831,0,586	0/0:13,0:12:30.10:0,30,526	0/1:18,0:14:5.77:6,0,256	0/0:13,0:11:3.74:0,4,162	0/0:19,0:19:48.16:0,48,838	0/0:18,0:18:45.14:0,45,756	0/0:26,0:26:78.27:0,78,1357	0/1:19,22:39:99:766,0,632	0/0:21,0:21:60.21:0,60,1052	0/1:13,20:29:99:734,0,235	0/1:14,10:22:99:308,0,464	0/0:21,0:21:63.22:0,63,1104	0/0:27,0:27:81.25:0,81,1363	0/0:32,0:32:93.32:0,93,1610	0/1:17,38:55:99:1345,0,543	0/0:37,0:37:99:0,105,1754	0/0:34,0:34:96.29:0,96,1516	0/1:6,9:15:99:286,0,220	0/1:30,14:42:99:435,0,1054	0/1:5,19:23:90.47:664,0,90	0/1:23,17:40:99:490,0,570	0/1:19,16:35:99:444,0,518	0/0:20,0:20:51.04:0,51,884	0/0:36,0:36:99:0,99,1735	0/1:16,19:32:99:681,0,482	0/1:15,23:34:99:835,0,366	0/1:13,36:49:99:1210,0,276	0/1:4,5:9:80.39:219,0,80
chr10	40856473	.	AAGCT	A	1051.09	PASS	AB=0.869;AC=7;AF=0.125;AN=56;BaseQRankSum=1.761;DP=881;FS=17.185;HRun=0;HaplotypeScore=284.3862;InbreedingCoeff=-0.1535;MQ=58.08;MQ0=14;MQRankSum=-8.847;QD=4.12;ReadPosRankSum=-1.446;VQSLOD=0.7928;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:37,8:42:99:250,0,2106	0/0:10,0:10:30.10:0,30,744	0/0:18,0:9:1.42:0,1,216	0/0:13,0:6:14.79:0,15,296	0/0:23,0:21:63.22:0,63,1659	0/0:15,0:15:39.13:0,39,1047	0/0:27,0:27:75.26:0,75,1928	0/1:44,6:46:99:215,0,2613	0/0:23,0:23:69.24:0,69,1815	0/0:40,0:32:93.29:0,93,2390	0/0:24,0:22:54.19:0,54,1443	0/0:29,0:29:72.24:0,72,1880	0/0:28,0:28:84.29:0,84,2267	0/0:33,0:33:99:0,99,2565	0/0:59,0:59:99:0,175,4659	0/0:50,0:50:99:0,141,3581	0/0:38,0:38:99:0,108,2808	0/0:18,0:18:54.19:0,54,1436	0/1:37,2:33:32.63:33,0,1680	0/0:32,0:29:87.24:0,87,2189	0/1:30,14:42:99:442,0,1413	0/1:28,4:32:80.20:80,0,1610	0/0:17,0:17:45.15:0,45,1169	0/0:35,0:35:99:0,102,2740	0/0:37,0:32:84.29:0,84,2232	0/1:33,3:32:74.49:74,0,2006	0/0:57,0:57:99:0,162,4031	0/1:7,2:9:86.53:87,0,504
chr10	40856502	.	AAGCT	A	1903.61	PASS	AB=0.827;AC=8;AF=0.143;AN=56;BaseQRankSum=6.428;DP=854;FS=5.239;HRun=0;HaplotypeScore=261.2905;InbreedingCoeff=-0.1845;MQ=54.90;MQ0=24;MQRankSum=-10.654;QD=7.32;ReadPosRankSum=0.166;VQSLOD=2.1642;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:35,4:32:14.77:15,0,1142	0/0:9,0:9:27.09:0,27,729	0/0:25,0:5:15.02:0,15,295	0/0:14,0:1:2.99:0,3,24	0/0:30,0:27:72.25:0,72,1840	0/0:13,0:13:39.13:0,39,1013	0/0:30,0:30:90.31:0,90,2324	0/0:48,2:41:1.54:0,2,2357	0/0:19,0:19:54.19:0,54,1458	0/0:36,0:28:78.27:0,78,2072	0/0:17,0:15:33.10:0,33,785	0/0:27,0:27:81.28:0,81,2139	0/0:32,0:32:93.32:0,93,2486	0/0:33,0:33:99:0,99,2649	0/0:57,0:57:99:0,163,4280	0/0:53,0:53:99:0,160,4273	0/0:35,0:35:99:0,102,2743	0/0:29,0:29:81.28:0,81,2097	0/1:28,5:20:99:228,0,948	0/1:25,5:27:99:158,0,1436	0/1:40,4:42:86.70:87,0,1170	0/1:17,6:23:99:188,0,571	0/0:21,0:21:60.20:0,60,1482	0/0:37,0:36:99:0,102,2710	0/0:27,0:22:60.20:0,60,1511	0/1:22,7:28:99:319,0,1189	0/1:34,22:56:99:948,0,2210	0/1:4,2:6:96.01:96,0,197
chr10	40860064	.	GGCA	G	2519.97	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=8.990;DP=561;FS=7.729;HRun=0;HaplotypeScore=80.3289;InbreedingCoeff=0.9875;MQ=85.13;MQ0=0;MQRankSum=-2.870;QD=32.31;ReadPosRankSum=2.717;VQSLOD=3.3748;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,132,2880	0/0:7,0:7:21.07:0,21,461	0/0:26,0:25:69.24:0,69,1492	0/0:36,0:37:91.31:0,91,1817	1/1:6,14:20:33.11:525,33,0	0/0:27,0:27:72.22:0,72,1577	0/0:22,0:22:63.22:0,63,1400	0/0:29,0:29:75.26:0,75,1669	0/0:16,0:16:48.16:0,48,1071	0/0:17,0:17:39.13:0,39,852	0/0:5,0:5:12.04:0,12,250	0/0:20,0:20:57.20:0,57,1268	0/0:20,0:20:54.19:0,54,1185	1/1:2,13:15:36.12:588,36,0	0/0:20,0:20:57.20:0,57,1269	1/1:2,17:19:48.16:784,48,0	1/1:1,23:24:48.16:784,48,0	0/0:21,0:21:63.19:0,63,1363	0/0:13,0:13:39.13:0,39,864	0/0:16,0:16:33.11:0,33,737	0/0:18,0:18:48.16:0,48,1071	0/0:14,0:14:36.11:0,36,761	0/0:11,0:11:18.06:0,18,402	0/0:10,0:10:27.09:0,27,603	0/0:11,0:11:33.11:0,33,736	0/0:20,0:20:45.15:0,45,1005	0/0:20,0:20:54.19:0,54,1198	0/0:30,0:30:84.26:0,84,1831
chr10	40860291	.	T	TG	626.58	PASS	AB=0.889;AC=30;AF=0.536;AN=56;BaseQRankSum=-0.074;DP=393;FS=4.828;HRun=12;HaplotypeScore=74.8412;InbreedingCoeff=0.2972;MQ=67.23;MQ0=21;MQRankSum=-1.320;QD=2.36;ReadPosRankSum=-0.391;VQSLOD=-0.6468;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,1:32:1.29:0,1,18	0/1:1,3:4:0:0,0,0	0/1:24,0:8:14.30:14,0,25	0/0:32,0:10:2.31:0,2,20	0/1:5,0:5:0:0,0,0	0/0:11,0:10:11.02:0,11,56	0/1:12,10:21:13.70:47,0,14	0/1:8,1:9:0:0,0,0	1/1:9,0:8:5.94:43,6,0	1/1:14,0:15:3.31:15,3,0	0/1:4,0:4:0:0,0,0	0/0:11,0:11:11.70:0,12,71	0/1:5,1:6:0:0,0,0	0/1:9,0:9:20.47:57,0,20	1/1:5,7:11:5.96:48,6,0	1/1:10,0:10:8.89:63,9,0	1/1:14,19:32:7.79:55,8,0	1/1:19,3:22:29.92:254,30,0	0/0:11,1:11:5.78:0,6,37	0/1:10,1:12:0:0,0,0	1/1:17,8:25:5.82:40,6,0	0/1:6,0:6:0:0,0,0	0/0:4,0:6:2.91:0,3,17	0/0:23,0:22:26.26:0,26,169	1/1:4,0:4:5.87:35,6,0	0/1:12,0:12:2.94:3,0,16	1/1:12,0:12:11:75,11,0	0/1:6,2:8:14.21:23,0,14
chr10	40860375	.	AG	A	863.31	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=1.984;DP=493;FS=6.090;HRun=2;HaplotypeScore=55.5555;InbreedingCoeff=0.9030;MQ=60.49;MQ0=11;MQRankSum=0.708;QD=25.39;ReadPosRankSum=1.847;VQSLOD=3.1870;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,120,1610	0/0:6,0:6:15:0,15,160	0/0:20,0:7:5.36:0,5,78	0/0:18,2:7:9:0,9,90	0/0:14,0:13:35.86:0,36,422	1/1:0,11:11:30.10:386,30,0	1/1:0,23:23:48.10:598,48,0	0/0:22,0:22:66.10:0,66,745	0/0:12,0:12:30.55:0,31,393	0/0:12,0:12:35.88:0,36,421	0/0:7,0:7:20.92:0,21,249	0/0:28,0:28:84.09:0,84,1098	0/0:8,0:8:24.08:0,24,343	0/0:13,0:13:39.06:0,39,504	0/0:18,0:18:47.86:0,48,600	0/0:11,0:11:33.11:0,33,473	0/0:38,0:38:99:0,102,1326	0/0:28,1:29:35.27:0,35,893	0/0:23,0:23:65.11:0,65,808	0/0:12,0:12:35.99:0,36,432	0/0:13,0:13:38.99:0,39,507	0/0:9,0:9:21.05:0,21,273	0/0:15,0:15:42.03:0,42,501	0/0:25,0:25:69.14:0,69,906	0/0:11,0:11:29.13:0,29,383	0/0:19,0:19:52.02:0,52,654	0/0:18,0:18:54.10:0,54,710	0/0:14,0:13:38.78:0,39,417
chr10	40862233	.	GA	G	3079.30	PASS	AB=0.731;AC=30;AF=0.536;AN=56;BaseQRankSum=3.129;DP=538;FS=16.996;HRun=13;HaplotypeScore=58.1681;InbreedingCoeff=0.3655;MQ=56.58;MQ0=13;MQRankSum=2.780;QD=7.84;ReadPosRankSum=2.157;VQSLOD=0.8426;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:12,27:38:47.07:348,47,0	1/1:6,3:8:8.94:66,9,0	0/1:9,0:5:11.37:11,0,21	0/0:6,0:3:8.16:0,8,52	0/1:25,2:27:11.45:11,0,384	1/1:4,11:15:26.83:197,27,0	0/1:5,16:21:0.54:151,0,1	0/1:9,21:30:0.55:309,0,1	0/0:16,0:16:38.97:0,39,356	1/1:4,10:14:26.81:196,27,0	1/1:5,10:15:24.36:164,24,0	0/0:28,0:28:53.64:0,54,497	0/0:14,0:13:28.94:0,29,236	0/0:21,2:24:6.59:0,7,314	1/1:7,15:22:9.54:232,10,0	0/0:21,2:21:10.05:0,10,394	0/1:29,5:33:32.96:33,0,496	0/1:13,14:27:60.21:198,0,60	0/1:10,7:17:34.63:124,0,35	1/1:3,11:14:14.13:232,14,0	1/1:2,9:12:16.94:115,17,0	0/0:2,1:3:0:0,0,0	0/0:13,0:13:2.16:0,2,158	0/0:17,1:18:1.51:0,2,205	0/1:3,13:16:5.32:129,0,5	1/1:6,24:29:65.94:493,66,0	1/1:10,14:26:26.99:184,27,0	1/1:4,7:11:8.90:66,9,0
chr10	40862672	.	TGTGA	T	791.44	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.783;DP=906;FS=0.799;HRun=0;HaplotypeScore=186.5267;InbreedingCoeff=0.9826;MQ=61.64;MQ0=5;MQRankSum=-0.245;QD=13.88;ReadPosRankSum=1.291;VQSLOD=3.3577;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:87.28:0,87,2134	0/0:14,0:14:17.79:0,18,258	0/0:43,0:30:68.18:0,68,1242	0/0:44,0:25:40.78:0,41,954	0/0:30,0:29:21.07:0,21,499	1/1:5,21:26:27.09:485,27,0	1/1:9,22:31:23.63:427,24,0	0/0:52,0:51:99:0,126,2673	0/0:31,0:31:87.27:0,87,2087	0/0:21,0:20:54.14:0,54,1209	0/0:16,0:16:27.09:0,27,608	0/0:47,0:47:99:0,132,3030	0/0:33,0:33:84.24:0,84,1902	0/0:29,0:29:14.90:0,15,186	0/0:38,0:38:87.28:0,87,2126	0/0:32,0:32:44.84:0,45,491	0/0:29,0:29:42.48:0,42,679	0/0:28,0:28:63.10:0,63,1454	0/0:25,0:24:72.18:0,72,1441	0/0:28,0:28:66.21:0,66,1615	0/0:103,0:102:99:0,191,4637	0/0:20,0:20:30.09:0,30,675	0/0:13,0:13:33.10:0,33,745	0/0:53,0:53:99:0,141,3353	0/0:23,0:23:57.18:0,57,1423	0/0:25,0:25:72.12:0,72,1538	0/0:18,0:18:45.12:0,45,1057	0/0:20,0:20:42.14:0,42,1031
chr10	40862694	.	TGTGTGTGTGA	T	82.81	PASS	AB=1.000;AC=4;AF=0.071;AN=56;BaseQRankSum=3.137;DP=920;FS=3.861;HRun=0;HaplotypeScore=279.8907;InbreedingCoeff=0.5588;MQ=53.03;MQ0=16;MQRankSum=-3.680;QD=1.05;ReadPosRankSum=-0.757;VQSLOD=2.0384;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:35:75.26:0,75,2797	1/1:3,14:17:8.99:165,9,0	0/0:30,0:11:3.01:0,3,66	0/0:37,0:13:8.92:0,9,112	0/1:24,0:23:0.17:0,0,0	0/0:21,0:21:30.57:0,31,826	0/0:27,0:27:51.12:0,51,1077	0/0:59,0:56:99:0,108,2505	0/0:37,0:37:93.32:0,93,3385	0/0:24,0:22:50.64:0,51,1521	0/0:14,0:14:15.04:0,15,565	0/0:54,0:54:99:0,126,4496	0/0:30,0:30:78.24:0,78,2571	0/1:38,0:38:6.08:8,0,6	0/0:39,0:39:60.20:0,60,2396	0/0:28,0:28:14.86:0,15,43	0/0:31,0:31:4.96:0,5,15	0/0:25,0:25:38.95:0,39,1670	0/0:32,0:30:48.15:0,48,1685	0/0:34,0:34:54.14:0,54,2018	0/0:100,0:98:86.05:0,86,4155	0/0:18,0:18:30.10:0,30,924	0/0:14,0:14:35.95:0,36,921	0/0:53,0:52:96.33:0,96,3694	0/0:29,0:29:39.13:0,39,1467	0/0:32,0:31:72.24:0,72,2358	0/0:18,0:17:33.08:0,33,1081	0/0:19,0:19:27.09:0,27,1071
chr10	40862698	.	TGTGTGA	T	953.28	PASS	AB=0.769;AC=8;AF=0.143;AN=56;BaseQRankSum=6.314;DP=930;FS=9.129;HRun=0;HaplotypeScore=228.8821;InbreedingCoeff=0.7778;MQ=52.94;MQ0=21;MQRankSum=-6.532;QD=7.01;ReadPosRankSum=1.763;VQSLOD=1.4203;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:33:93.28:0,93,2596	0/1:17,0:17:22:54,0,22	0/0:31,0:10:16.65:0,17,233	0/0:36,0:13:16.95:0,17,254	0/1:3,18:20:0:0,0,1	0/0:21,0:21:36.09:0,36,782	0/0:27,0:27:51.18:0,51,1429	0/0:64,0:60:99:0,162,3881	0/0:39,0:39:99:0,108,3111	0/0:26,0:24:65.85:0,66,1710	0/0:13,0:13:18.05:0,18,518	0/0:50,0:50:99:0,138,4117	0/0:31,0:31:84.27:0,84,2468	1/1:2,36:38:11.28:223,11,0	0/0:44,0:44:75.21:0,75,2186	1/1:0,28:28:22.91:551,23,0	1/1:3,29:32:14.51:268,15,0	0/0:25,0:25:54.13:0,54,1517	0/0:34,0:32:77.85:0,78,1685	0/0:34,0:34:54.61:0,55,1695	0/0:101,0:98:99:0,139,4090	0/0:17,0:17:30.10:0,30,880	0/0:13,0:13:36.12:0,36,1033	0/0:54,0:53:99:0,138,3545	0/0:28,0:28:51.16:0,51,1428	0/0:33,0:32:90.23:0,90,2400	0/0:19,0:18:45.09:0,45,1118	0/0:19,0:19:33.11:0,33,988
chr10	40862750	.	TGTGTGTGC	T	8186.06	PASS	AC=20;AF=0.385;AN=52;BaseQRankSum=14.381;DP=834;FS=0.793;HRun=0;HaplotypeScore=237.0707;InbreedingCoeff=0.8938;MQ=58.16;MQ0=13;MQRankSum=-7.636;QD=26.24;ReadPosRankSum=-2.777;VQSLOD=3.8433;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:87.15:0,87,2823	0/0:15,0:15:20.59:0,21,725	0/0:33,0:17:24.04:0,24,359	0/0:44,0:30:10.49:0,10,1226	0/0:16,0:15:21.07:0,21,785	0/0:19,0:19:33.11:0,33,1325	0/0:40,0:40:87.14:0,87,2804	1/1:6,56:62:99:3052,166,0	0/0:38,0:38:99:0,105,3664	1/1:4,20:22:57.05:1321,57,0	./.	0/0:52,0:52:99:0,144,5018	0/0:41,0:41:99:0,111,3920	0/0:40,0:40:54.14:0,54,2107	1/1:2,42:44:8.11:199,8,0	0/0:34,0:34:64.73:0,65,2051	0/0:27,0:26:23.20:0,23,724	./.	1/1:4,14:17:42.05:788,42,0	1/1:2,27:29:9.03:245,9,0	1/1:14,44:55:3.01:52,3,0	0/0:16,0:16:39.12:0,39,1270	0/0:10,0:10:30.05:0,30,968	0/0:40,0:40:99:0,102,3732	1/1:1,19:20:3.01:38,3,0	1/1:6,30:36:90.22:2001,90,0	1/1:1,10:11:12.04:327,12,0	1/1:4,6:10:6.02:164,6,0
chr10	40862918	.	TTGTGTGTGTGTGTG	T	450.31	PASS	AC=8;AF=0.174;AN=46;BaseQRankSum=3.844;DP=527;FS=3.789;HRun=0;HaplotypeScore=185.3375;InbreedingCoeff=0.6408;MQ=58.62;MQ0=18;MQRankSum=-3.029;QD=8.66;ReadPosRankSum=0.394;VQSLOD=2.3369;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:25:27.07:0,27,1130	./.	./.	./.	0/0:21,0:21:15.52:0,16,783	1/1:11,0:13:6.02:195,6,0	./.	0/0:30,0:28:9.48:0,9,127	1/1:11,0:11:1.24:3,1,0	0/0:22,0:21:13.91:0,14,135	0/0:11,0:11:5.75:0,6,83	0/0:19,0:19:12.04:0,12,364	1/1:15,4:17:6.02:232,6,0	0/0:24,0:24:20.29:0,20,1181	0/0:15,0:14:9.69:0,10,82	0/0:19,0:19:18.04:0,18,854	0/0:36,0:35:28.51:0,29,1407	0/0:15,0:13:11.28:0,11,138	0/0:15,0:12:12.13:0,12,161	./.	0/0:33,0:31:15.52:0,16,388	0/0:12,0:11:3.01:0,3,172	0/0:10,0:10:15.05:0,15,576	0/0:24,0:27:14.81:0,15,486	0/0:17,0:18:6.02:0,6,78	0/0:19,0:19:9.02:0,9,165	0/0:12,0:12:15.03:0,15,257	1/1:6,1:7:5.95:134,6,0
chr10	40863006	.	G	GCAAGCA	10268.79	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=11.249;DP=469;FS=4.068;HRun=0;HaplotypeScore=208.4953;InbreedingCoeff=0.9869;MQ=81.14;MQ0=1;MQRankSum=-9.818;QD=28.60;ReadPosRankSum=3.685;VQSLOD=4.0815;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:21:46.53:514,47,0	1/1:8,0:8:21.40:212,21,0	0/0:27,0:25:68.57:0,69,1417	0/0:28,0:23:56.35:0,56,1058	1/1:14,0:14:17.48:160,17,0	1/1:20,0:20:56.60:566,57,0	1/1:22,0:22:50.23:412,50,0	1/1:22,0:24:66:1062,66,0	1/1:13,0:13:32.79:324,33,0	1/1:15,0:14:41.81:577,42,0	1/1:12,0:12:17.95:212,18,0	0/0:16,0:16:45.15:0,45,1108	1/1:10,0:10:29.87:340,30,0	1/1:18,0:18:44.51:532,45,0	1/1:17,0:17:48.11:618,48,0	1/1:14,0:14:38.81:396,39,0	1/1:15,0:15:38.77:497,39,0	1/1:12,0:12:36.09:492,36,0	1/1:15,0:15:43.38:575,43,0	1/1:14,0:14:29.90:320,30,0	1/1:8,5:15:12.26:118,12,0	1/1:21,0:22:53.49:515,53,0	0/0:16,0:16:42.14:0,42,1032	0/0:23,0:23:60.62:0,61,1357	1/1:16,0:16:41.89:475,42,0	1/1:17,0:17:50.99:604,51,0	1/1:7,0:7:20.93:190,21,0	1/1:18,0:18:53.91:559,54,0
chr10	40863007	.	CT	C	5830.69	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=12.383;DP=427;FS=1.453;HRun=1;HaplotypeScore=161.1455;InbreedingCoeff=0.9788;MQ=84.42;MQ0=1;MQRankSum=-9.093;QD=18.39;ReadPosRankSum=5.793;VQSLOD=5.1926;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,18:20:41.56:313,42,0	1/1:0,7:8:17.88:137,18,0	0/0:27,0:25:47.93:0,48,1043	0/0:27,1:23:56.35:0,56,789	1/1:0,13:13:17.73:131,18,0	1/1:0,18:18:41.53:293,42,0	1/1:0,17:17:41.19:255,41,0	1/1:2,18:20:53.43:365,53,0	1/1:0,12:12:29.74:221,30,0	1/1:0,14:14:41.80:338,42,0	1/1:0,12:12:17.91:142,18,0	0/0:16,0:16:48.16:0,48,766	1/1:1,9:10:29.61:200,30,0	1/1:0,13:13:35.78:274,36,0	1/1:0,15:15:41.92:343,42,0	1/1:0,12:12:32.75:246,33,0	1/1:1,11:12:32.74:246,33,0	1/1:0,11:11:32.90:261,33,0	1/1:0,13:13:38.33:256,38,0	1/1:1,13:14:27.72:209,28,0	1/1:5,3:8:8.94:68,9,0	1/1:1,18:19:44.63:333,45,0	0/0:17,0:17:42.14:0,42,671	0/0:22,0:22:63.14:0,63,931	1/1:0,15:15:38.79:304,39,0	1/1:0,17:17:50.60:378,51,0	1/1:0,7:7:20.77:145,21,0	1/1:0,17:17:50.59:375,51,0
chr10	40863011	.	GT	G	7753.84	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=12.571;DP=434;FS=0.430;HRun=1;HaplotypeScore=156.1025;InbreedingCoeff=0.9846;MQ=86.62;MQ0=1;MQRankSum=-8.814;QD=23.78;ReadPosRankSum=4.042;VQSLOD=4.8838;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,18:20:50.80:436,51,0	1/1:1,7:9:21:189,21,0	0/0:28,0:27:75.25:0,75,1149	0/0:26,0:24:62.49:0,62,945	1/1:0,13:13:29.60:228,30,0	1/1:0,18:18:44.89:376,45,0	1/1:0,17:17:44.77:336,45,0	1/1:2,18:20:59.94:498,60,0	1/1:0,12:12:35.87:303,36,0	1/1:0,14:14:42.03:403,42,0	1/1:1,12:13:32.69:261,33,0	0/0:16,0:16:48.16:0,48,768	1/1:2,9:11:32.93:270,33,0	1/1:0,13:13:38.96:348,39,0	1/1:0,15:15:45.02:428,45,0	1/1:2,12:14:38.98:345,39,0	1/1:0,11:11:32.99:297,33,0	1/1:0,11:11:33.04:312,33,0	1/1:1,13:14:41.82:339,42,0	1/1:1,13:14:41.38:331,41,0	1/1:6,3:9:9:82,9,0	1/1:1,18:19:53.78:454,54,0	0/0:17,0:17:45.15:0,45,718	0/0:21,0:21:57.19:0,57,911	1/1:1,15:16:41.97:383,42,0	1/1:1,17:18:53.95:477,54,0	1/1:1,7:8:23.97:202,24,0	1/1:0,17:17:50.99:454,51,0
chr10	40865886	.	TG	T	609.35	PASS	AC=2;AF=0.037;AN=54;BaseQRankSum=4.116;DP=613;FS=0.769;HRun=7;HaplotypeScore=65.6960;InbreedingCoeff=0.9809;MQ=69.85;MQ0=0;MQRankSum=-2.802;QD=24.37;ReadPosRankSum=3.572;VQSLOD=3.9803;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:66.21:0,66,829	./.	0/0:13,0:13:27.53:0,28,320	0/0:16,0:15:36.09:0,36,426	0/0:23,0:23:66.18:0,66,794	0/0:16,0:16:45.14:0,45,565	0/0:27,0:27:78.23:0,78,961	0/0:21,0:21:40.51:0,41,436	0/0:21,0:21:57.18:0,57,717	0/0:23,0:23:57.16:0,57,692	0/0:17,0:17:48.61:0,49,592	0/0:26,0:26:78.24:0,78,962	0/0:25,0:25:69.21:0,69,854	0/0:26,0:26:75.18:0,75,910	0/0:18,0:18:54.17:0,54,679	0/0:19,0:19:54.17:0,54,679	0/0:27,0:27:75.24:0,75,943	0/0:22,0:22:54.16:0,54,662	0/0:17,1:18:14.53:0,15,496	0/0:19,0:19:48.13:0,48,577	0/0:39,0:39:99:0,99,1233	0/0:28,0:28:78.17:0,78,925	0/0:24,0:24:63.91:0,64,754	0/0:39,0:39:99:0,117,1467	1/1:1,24:25:69.16:704,69,0	0/0:16,0:16:36.10:0,36,436	0/0:28,0:28:81.25:0,81,1002	0/0:11,0:11:30.08:0,30,362
chr10	40865996	.	TC	T	10468.08	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=5.622;DP=673;FS=3.805;HRun=2;HaplotypeScore=76.4182;InbreedingCoeff=0.9999;MQ=78.33;MQ0=0;MQRankSum=-1.905;QD=36.35;ReadPosRankSum=-1.370;VQSLOD=4.8794;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:84.28:0,84,1258	0/0:11,0:11:33.11:0,33,494	0/0:15,0:15:42.14:0,42,613	0/0:16,0:16:39.13:0,39,581	0/0:20,0:20:60.19:0,60,877	0/0:23,0:23:69.19:0,69,970	0/0:30,0:30:90.30:0,90,1348	1/1:1,20:21:60.18:764,60,0	0/0:27,0:27:81.27:0,81,1212	1/1:1,17:18:48.13:595,48,0	1/1:0,13:13:33.11:428,33,0	0/0:31,0:31:93.32:0,93,1392	0/0:30,0:30:87.29:0,87,1303	0/0:28,0:28:84.27:0,84,1237	1/1:0,32:32:90.29:1168,90,0	0/0:26,0:26:78.25:0,78,1149	0/0:38,0:38:99:0,111,1644	1/1:0,20:20:57.19:740,57,0	1/1:0,24:24:69.21:880,69,0	1/1:1,13:14:39.13:506,39,0	1/1:1,55:56:99:2025,157,0	0/0:21,0:21:63.20:0,63,920	0/0:12,0:12:36.11:0,36,519	0/0:29,0:29:84.28:0,84,1259	1/1:0,27:27:81.26:1051,81,0	1/1:0,23:23:69.21:869,69,0	1/1:0,26:26:69.22:896,69,0	1/1:0,14:14:42.14:545,42,0
chr10	40868725	.	CA	C	3039.33	PASS	AB=0.689;AC=31;AF=0.554;AN=56;BaseQRankSum=1.228;DP=599;FS=2.583;HRun=15;HaplotypeScore=76.2712;InbreedingCoeff=0.3048;MQ=68.96;MQ0=1;MQRankSum=1.110;QD=6.97;ReadPosRankSum=2.545;VQSLOD=3.0706;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:16,13:31:3.13:234,0,3	0/0:3,0:11:14.92:0,15,86	1/1:24,0:11:2.83:22,3,0	0/0:17,0:13:12.27:0,12,111	0/1:11,13:29:46.81:175,0,47	0/0:19,1:23:25.22:0,25,302	0/1:10,1:12:1.36:1,0,101	0/1:13,13:26:73.55:74,0,76	0/0:17,0:21:14.67:0,15,104	1/1:11,21:32:47.06:306,47,0	1/1:11,9:23:16.98:207,17,0	0/0:16,0:21:7.54:0,8,167	0/0:17,0:17:23.49:0,23,181	0/1:8,6:14:15.68:29,0,16	1/1:15,25:41:26.28:380,26,0	0/1:15,12:27:11.56:189,0,12	0/1:8,11:20:35.68:174,0,36	1/1:2,2:4:2.86:19,3,0	1/1:3,13:15:25.81:234,26,0	1/1:12,6:20:21.33:126,21,0	0/1:8,6:15:20.85:67,0,21	1/1:8,12:22:39.12:241,39,0	0/0:22,2:26:9.24:0,9,308	0/0:22,3:25:3.37:0,3,257	1/1:6,12:19:40.35:255,40,0	0/1:8,12:23:5.27:199,0,5	1/1:10,13:23:3.77:147,4,0	1/1:2,9:13:24.72:146,25,0
chr10	40870231	.	G	GGCGC	853.81	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=6.673;DP=573;FS=18.871;HRun=0;HaplotypeScore=128.2829;InbreedingCoeff=0.5968;MQ=70.23;MQ0=11;MQRankSum=-6.452;QD=6.19;ReadPosRankSum=-3.552;VQSLOD=0.4673;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:45.13:0,45,680	0/0:9,0:9:27.08:0,27,390	0/0:36,0:18:39.11:0,39,583	0/0:30,0:23:53.94:0,54,765	1/1:13,0:13:7.65:73,8,0	0/1:19,0:19:1.72:2,0,172	0/0:24,0:24:29.11:0,29,702	0/0:29,0:29:70.47:0,70,1139	0/1:26,0:26:39.04:39,0,695	0/0:22,0:22:56.84:0,57,791	0/0:13,0:13:36.12:0,36,539	0/0:23,0:23:60.19:0,60,969	0/1:16,0:16:99:131,0,109	1/1:20,0:21:29.74:466,30,0	0/0:25,0:24:57.19:0,57,838	1/1:19,0:19:12.04:174,12,0	1/1:12,11:24:0.77:120,1,0	0/0:25,0:25:54.10:0,54,774	0/0:11,0:11:29.31:0,29,420	0/0:15,0:15:39.02:0,39,500	0/0:29,0:29:60.20:0,60,909	0/0:8,0:8:21.07:0,21,278	0/0:7,0:7:14.92:0,15,260	0/0:26,0:26:75.25:0,75,1190	0/0:17,0:17:45.14:0,45,654	0/0:19,0:19:51.09:0,51,686	0/0:30,0:30:80.98:0,81,1140	0/0:8,0:8:24.08:0,24,325
chr10	40870236	.	GCACA	G	4248.67	PASS	AB=0.800;AC=28;AF=0.519;AN=54;BaseQRankSum=-0.427;DP=625;FS=1.755;HRun=0;HaplotypeScore=125.2989;InbreedingCoeff=0.7772;MQ=64.13;MQ0=13;MQRankSum=2.315;QD=13.84;ReadPosRankSum=1.717;VQSLOD=4.7864;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:34:3:28,3,0	1/1:6,0:9:12.02:113,12,0	./.	0/0:33,0:24:2.39:0,2,67	0/0:9,0:22:14.80:0,15,179	0/0:13,0:22:2.99:0,3,52	0/0:23,0:23:20.97:0,21,261	0/1:24,3:27:28.61:233,0,29	0/0:21,0:29:24.05:0,24,376	1/1:11,11:22:24.04:315,24,0	0/1:8,4:14:0.49:111,0,0	0/0:25,0:25:44.97:0,45,861	0/0:9,0:20:27.56:0,28,452	0/0:5,0:24:30.37:0,30,459	1/1:8,12:25:23.55:393,24,0	0/0:9,0:27:12.04:0,12,208	0/0:25,0:25:9.03:0,9,150	1/1:9,17:27:16.16:484,16,0	1/1:9,6:14:13.07:167,13,0	1/1:7,8:15:22.01:334,22,0	1/1:15,14:29:21.06:333,21,0	1/1:2,0:9:18.02:168,18,0	0/0:9,0:9:18.06:0,18,395	0/0:24,0:27:53.29:0,53,842	1/1:9,8:18:18.05:266,18,0	1/1:9,12:23:25.29:487,25,0	1/1:18,10:30:36.11:531,36,0	1/1:4,5:8:18.06:286,18,0
chr10	40870248	.	A	ACACACA	2431.20	PASS	AB=1.000;AC=17;AF=0.315;AN=54;BaseQRankSum=-6.837;DP=622;FS=3.483;HRun=0;HaplotypeScore=154.1039;InbreedingCoeff=0.7347;MQ=56.19;MQ0=16;MQRankSum=-5.135;QD=12.10;ReadPosRankSum=-0.525;VQSLOD=3.0326;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:8.96:0,9,116	0/0:8,0:8:12.04:0,12,161	./.	0/0:30,0:19:2.71:0,3,15	1/1:22,0:22:5.81:143,6,0	1/1:20,0:20:2.75:96,3,0	1/1:15,4:20:4.24:28,4,0	0/0:26,0:26:15.09:0,15,156	1/1:24,0:24:18.06:488,18,0	0/0:25,0:24:18.05:0,18,228	0/0:13,0:13:12.04:0,12,168	0/1:25,0:25:9.69:10,0,592	1/1:23,0:23:24.33:657,24,0	1/1:20,0:20:27.09:682,27,0	0/0:27,0:26:36.12:0,36,512	1/1:22,0:22:12.51:328,13,0	1/1:25,0:25:8.70:181,9,0	0/0:30,0:30:33.03:0,33,461	0/0:19,0:18:1.21:0,1,76	0/0:14,0:14:21.07:0,21,293	0/0:34,0:33:21.07:0,21,292	0/0:10,0:10:18.01:0,18,213	0/0:13,0:13:11.64:0,12,192	0/0:26,0:26:36.10:0,36,626	0/0:18,0:18:18.06:0,18,251	0/0:20,0:20:29.87:0,30,341	0/0:33,0:33:35.85:0,36,502	0/0:7,0:6:18.06:0,18,251
chr10	40873135	.	C	CGCGGCACAG	641.18	PASS	AB=1.000;AC=5;AF=0.114;AN=44;BaseQRankSum=1.355;DP=386;FS=1.671;HRun=0;HaplotypeScore=108.9109;InbreedingCoeff=0.5313;MQ=68.98;MQ0=0;MQRankSum=-4.767;QD=13.94;ReadPosRankSum=-2.393;VQSLOD=2.2118;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:27.06:0,27,563	0/0:4,0:4:3.01:0,3,40	0/1:7,0:6:2.62:3,0,16	./.	./.	1/1:3,1:4:6.02:184,6,0	1/1:20,12:35:15.05:560,15,0	./.	0/0:8,0:8:12.04:0,12,292	0/0:16,0:16:18.06:0,18,349	./.	0/0:17,0:17:14.94:0,15,379	0/0:5,0:5:3.01:0,3,36	0/0:15,0:15:24.07:0,24,551	0/0:11,0:11:9.03:0,9,248	0/0:8,0:8:12.04:0,12,296	0/0:23,0:23:39.12:0,39,886	0/0:24,0:24:51.01:0,51,1302	0/0:16,0:16:15:0,15,315	./.	0/0:56,0:56:78.23:0,78,1741	0/0:4,0:4:3.01:0,3,65	./.	0/0:43,0:43:96.28:0,96,2167	0/0:11,0:11:15.04:0,15,395	0/0:10,0:10:18.06:0,18,444	0/0:10,0:10:21.07:0,21,513	0/0:6,0:6:6.02:0,6,128
chr10	40873794	.	TAAAAC	T	11183.08	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=15.186;DP=720;FS=1.900;HRun=0;HaplotypeScore=138.8169;InbreedingCoeff=0.9292;MQ=65.65;MQ0=1;MQRankSum=-3.832;QD=29.74;ReadPosRankSum=0.788;VQSLOD=4.7158;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,18:29:20.38:662,20,0	0/0:17,0:17:36.11:0,36,881	0/0:33,0:30:61.02:0,61,1492	0/1:30,0:18:15.50:16,0,324	0/0:26,0:26:63.20:0,63,1758	0/0:20,0:20:51.18:0,51,1474	0/0:24,0:24:42.13:0,42,1148	1/1:11,24:35:69.07:1128,69,0	0/0:29,0:29:72.24:0,72,2022	1/1:11,20:31:53.32:901,53,0	1/1:5,15:20:33.07:587,33,0	0/0:35,0:35:93.27:0,93,2439	0/0:28,0:27:51.18:0,51,1474	0/0:28,0:28:69.19:0,69,1752	1/1:11,26:37:60.21:1135,60,0	0/0:39,0:39:81.25:0,81,2219	0/0:19,0:19:45.15:0,45,1301	1/1:8,12:20:30.10:567,30,0	1/1:9,12:21:36.12:637,36,0	1/1:5,24:29:66.03:1098,66,0	1/1:4,13:17:30.05:530,30,0	1/1:7,13:20:39.05:698,39,0	0/0:24,0:24:63.21:0,63,1762	0/0:21,0:21:54.19:0,54,1559	1/1:2,12:14:30.10:550,30,0	1/1:8,20:28:63.19:1126,63,0	1/1:10,26:36:60.14:1096,60,0	1/1:1,8:9:24.08:454,24,0
chr10	40874301	.	G	GC	325.31	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-4.628;DP=721;FS=9.607;HRun=3;HaplotypeScore=89.9901;InbreedingCoeff=0.9919;MQ=85.99;MQ0=0;MQRankSum=-2.306;QD=21.69;ReadPosRankSum=0.968;VQSLOD=2.3751;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:72.22:0,72,864	1/1:1,14:15:29.97:420,30,0	0/0:25,0:25:68.38:0,68,790	0/0:22,0:22:60.04:0,60,708	0/0:26,0:26:57.10:0,57,656	0/0:24,0:24:57.16:0,57,673	0/0:26,0:26:72.22:0,72,864	0/0:32,0:32:63.17:0,63,738	0/0:23,0:23:66.20:0,66,791	0/0:16,0:16:33.10:0,33,396	0/0:16,0:16:27.08:0,27,324	0/0:32,0:32:90.28:0,90,1079	0/0:34,0:34:99:0,99,1164	0/0:29,0:29:78.24:0,78,936	0/0:39,0:39:99:0,114,1368	0/0:41,0:41:99:0,117,1393	0/0:33,0:33:99:0,99,1177	0/0:30,0:30:87.24:0,87,1028	0/0:22,0:22:60.18:0,60,712	0/0:21,0:21:24.07:0,24,287	0/0:27,0:27:75.22:0,75,888	0/0:22,0:22:39.12:0,39,465	0/0:12,0:12:21.05:0,21,243	0/0:35,0:35:99:0,102,1224	0/0:18,0:18:33.09:0,33,385	0/0:26,0:26:60.17:0,60,709	0/0:24,0:24:66.19:0,66,780	0/0:18,0:18:51.16:0,51,611
chr10	40874801	.	TAC	T	4098.74	PASS	AB=0.840;AC=36;AF=0.667;AN=54;BaseQRankSum=4.206;DP=684;FS=0.000;HRun=0;HaplotypeScore=115.6691;InbreedingCoeff=0.5530;MQ=67.41;MQ0=30;MQRankSum=1.830;QD=9.11;ReadPosRankSum=3.615;VQSLOD=3.3509;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:26,7:32:9.02:99,9,0	0/0:8,0:8:5.90:0,6,42	./.	0/0:61,0:19:0.34:0,0,1	0/0:8,0:12:17.99:0,18,169	1/1:17,0:29:32.80:158,33,0	1/1:12,0:16:8.52:42,9,0	1/1:30,2:32:11.97:123,12,0	0/0:15,0:15:9.03:0,9,134	0/0:30,0:30:51.60:0,52,559	1/1:12,3:18:3.56:184,4,0	1/1:6,0:13:17.04:84,17,0	0/1:18,1:19:14.77:15,0,206	0/0:19,0:23:33.03:0,33,353	1/1:15,25:40:84.23:918,84,0	0/0:11,0:20:27:0,27,253	0/1:8,1:14:17.35:17,0,109	0/1:15,5:19:2.74:146,0,3	1/1:11,3:14:9.02:95,9,0	1/1:6,9:16:23.89:244,24,0	1/1:14,13:27:33.09:361,33,0	1/1:5,16:21:42.11:460,42,0	1/1:6,0:8:5.68:28,6,0	1/1:32,0:41:28.41:140,28,0	1/1:12,13:26:32.75:324,33,0	0/1:12,10:23:19.48:265,0,19	1/1:20,8:28:29.57:305,30,0	1/1:7,2:11:11.70:94,12,0
chr10	40874843	.	C	CACACACAATAAA	112.58	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=1.283;DP=609;FS=4.279;HRun=0;HaplotypeScore=265.2049;InbreedingCoeff=0.7744;MQ=55.82;MQ0=8;MQRankSum=-2.380;QD=16.08;ReadPosRankSum=-2.739;VQSLOD=2.0251;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:26:50.65:0,51,1214	1/1:1,4:7:2.86:190,3,0	0/0:17,0:9:27.09:0,27,669	0/0:18,0:12:20.73:0,21,514	0/0:15,0:15:41.61:0,42,865	0/0:24,0:24:63.63:0,64,1784	0/0:22,0:22:54.16:0,54,1237	0/0:27,0:26:70.44:0,70,1602	0/0:14,0:14:38.83:0,39,1002	0/0:27,0:26:63.21:0,63,1789	0/0:17,0:17:45.14:0,45,1060	0/0:22,0:22:41.37:0,41,1066	0/0:21,0:21:53.77:0,54,1405	0/0:23,0:23:50.21:0,50,1199	0/0:42,0:42:99:0,117,3417	0/0:25,0:26:69.21:0,69,1456	0/0:22,0:22:51.17:0,51,1260	0/0:19,0:18:38.04:0,38,984	0/0:18,0:18:48.65:0,49,962	0/0:21,0:21:41.61:0,42,1044	0/0:33,0:32:75.14:0,75,1971	0/0:22,0:22:50.40:0,50,1546	0/0:12,0:12:27.09:0,27,690	0/0:26,0:25:60.05:0,60,1491	0/0:25,0:25:63.17:0,63,1644	0/0:30,0:30:77.15:0,77,1953	0/0:23,0:24:63.19:0,63,1682	0/0:7,0:7:18.06:0,18,508
chr10	40874856	.	TA	T	815.79	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=4.804;DP=653;FS=1.178;HRun=11;HaplotypeScore=108.1983;InbreedingCoeff=0.9293;MQ=59.81;MQ0=1;MQRankSum=-0.636;QD=16.32;ReadPosRankSum=3.521;VQSLOD=3.8649;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:59.90:0,60,608	0/0:9,0:9:16.99:0,17,150	0/0:18,0:12:11.92:0,12,108	0/0:16,0:14:23.53:0,24,219	0/0:20,0:20:51.13:0,51,543	1/1:8,18:26:37.44:445,37,0	1/1:2,22:24:59.93:493,60,0	0/0:37,0:37:78.01:0,78,784	0/0:18,0:18:42.09:0,42,439	0/0:25,0:25:57.13:0,57,597	0/0:18,1:19:11.44:0,11,321	0/0:24,0:24:63.07:0,63,631	0/0:19,0:19:45.04:0,45,445	0/0:25,1:26:44.46:0,44,637	0/0:40,0:42:92.16:0,92,935	0/0:31,0:31:78.14:0,78,793	0/0:27,0:27:63.11:0,63,641	0/0:18,0:18:48.09:0,48,495	0/0:11,0:11:27.05:0,27,275	0/0:25,1:27:44.28:0,44,609	0/0:29,0:30:75.14:0,75,785	0/0:21,0:22:40.23:0,40,418	0/0:12,1:13:8.52:0,9,295	0/0:28,0:29:69.59:0,70,709	0/0:19,1:21:29.30:0,29,487	0/0:26,1:27:29.45:0,29,492	0/0:31,1:32:54.43:0,54,761	0/0:16,0:16:39.06:0,39,393
chr10	40875506	.	TTCTA	T	2579.22	PASS	AB=0.954;AC=24;AF=0.462;AN=52;BaseQRankSum=7.092;DP=624;FS=0.551;HRun=0;HaplotypeScore=107.0830;InbreedingCoeff=0.6291;MQ=67.97;MQ0=4;MQRankSum=0.107;QD=8.35;ReadPosRankSum=1.782;VQSLOD=2.4897;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:20,7:27:15.05:229,15,0	0/1:12,1:13:24.71:25,0,398	./.	./.	1/1:15,2:17:6.02:92,6,0	1/1:22,0:22:36.11:513,36,0	1/1:16,0:16:5.93:40,6,0	0/0:36,0:36:1.25:0,1,3	1/1:15,5:20:12.04:169,12,0	0/0:12,0:19:30.10:0,30,536	0/0:11,0:18:18.06:0,18,313	0/1:23,1:24:9.67:10,0,706	1/1:17,10:27:24.08:366,24,0	0/1:29,1:30:89.20:89,0,818	0/0:15,0:28:33.11:0,33,603	0/0:29,0:29:30.09:0,30,640	0/0:17,0:17:21.07:0,21,458	0/0:16,0:16:18.06:0,18,392	0/0:29,0:29:33.11:0,33,766	1/1:9,5:14:15.05:228,15,0	0/0:12,0:12:18.06:0,18,419	1/1:10,3:13:9.03:137,9,0	0/0:13,0:13:15.05:0,15,325	0/0:16,0:16:21.07:0,21,484	0/0:26,0:26:30.10:0,30,695	0/1:24,1:25:6.66:7,0,770	1/1:21,13:34:30.10:458,30,0	1/1:17,10:27:27.09:412,27,0
chr10	40875511	.	TCTA	T	199.12	PASS	AB=0.855;AC=2;AF=0.036;AN=56;BaseQRankSum=11.467;DP=587;FS=1.620;HRun=0;HaplotypeScore=97.7761;InbreedingCoeff=-0.0650;MQ=66.80;MQ0=5;MQRankSum=0.281;QD=4.24;ReadPosRankSum=2.845;VQSLOD=1.5918;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:22.08:0,22,548	0/0:9,0:9:19.48:0,19,515	0/0:27,0:20:54.15:0,54,679	0/0:26,0:12:24.25:0,24,275	0/0:16,0:16:32.91:0,33,525	0/1:13,8:22:90.56:272,0,91	0/0:13,2:15:35.95:0,36,175	0/0:32,0:31:87.16:0,87,1060	0/0:17,0:17:4.17:0,4,390	0/0:21,0:20:60.20:0,60,1022	0/0:16,0:16:45.15:0,45,694	0/0:23,0:23:61.61:0,62,1269	0/0:25,0:25:5.24:0,5,489	0/0:30,0:30:64.43:0,64,1435	0/0:29,0:29:72.24:0,72,1202	0/0:28,0:28:84.28:0,84,1428	0/0:17,0:17:51.17:0,51,906	0/0:13,0:13:37.29:0,37,643	0/0:29,0:29:87.29:0,87,1514	0/0:13,0:13:1.34:0,1,277	0/0:11,0:11:30.10:0,30,599	0/0:12,0:12:10.25:0,10,291	0/0:12,0:12:36.12:0,36,642	0/0:15,0:15:39.13:0,39,774	0/0:27,0:27:81.27:0,81,1401	0/0:25,0:25:65.10:0,65,1343	0/1:25,0:25:10.04:10,0,407	0/0:25,0:24:0.57:0,1,483
chr10	40876979	.	C	CCT	220.22	PASS	AB=0.851;AC=5;AF=0.093;AN=54;BaseQRankSum=-3.499;DP=600;FS=5.134;HRun=0;HaplotypeScore=133.9654;InbreedingCoeff=-0.1416;MQ=57.92;MQ0=12;MQRankSum=0.750;QD=2.14;ReadPosRankSum=-1.902;VQSLOD=1.6040;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:27:16.38:0,16,184	0/0:13,0:13:8.07:0,8,35	./.	0/0:31,0:10:4.26:0,4,67	0/0:23,0:23:15.52:0,16,75	0/1:10,9:18:83.66:168,0,84	0/1:5,13:19:55.19:126,0,55	0/0:25,0:22:10.40:0,10,48	0/0:19,0:19:3.92:0,4,154	0/1:21,0:22:15.98:16,0,142	0/0:19,0:18:8.44:0,8,93	0/0:31,0:31:46.81:0,47,509	0/1:21,0:21:10.64:11,0,159	0/0:23,0:24:33.66:0,34,158	0/0:24,0:25:25.93:0,26,167	0/0:34,0:33:46.49:0,46,227	0/0:28,0:27:8.48:0,8,41	0/0:19,0:19:14.82:0,15,182	0/0:16,0:16:6.54:0,7,33	0/1:21,0:21:9.34:9,0,50	0/0:11,0:9:4.41:0,4,15	0/0:23,0:23:5.15:0,5,105	0/0:19,0:23:31.98:0,32,271	0/0:6,0:6:11.99:0,12,125	0/0:22,0:21:16.35:0,16,122	0/0:24,0:22:13.19:0,13,131	0/0:22,0:22:34.65:0,35,185	0/0:12,0:12:5.16:0,5,45
chr10	40876985	.	TCTCTCTCTCTCTCTCTCC	T	5551.70	PASS	AB=0.888;AC=11;AF=0.196;AN=56;BaseQRankSum=4.088;DP=636;FS=0.000;HRun=0;HaplotypeScore=281.6518;InbreedingCoeff=0.3116;MQ=57.97;MQ0=20;MQRankSum=-5.720;QD=23.93;ReadPosRankSum=2.419;VQSLOD=3.0535;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:22.20:0,22,2790	0/0:12,0:12:8.82:0,9,472	0/1:19,0:2:0:0,0,0	0/1:39,0:12:18.17:18,0,437	1/1:2,21:22:27.09:1212,27,0	0/0:23,0:22:39.13:0,39,2651	0/0:20,0:20:18.05:0,18,1192	0/0:28,0:24:30.10:0,30,1538	0/0:17,0:17:32.75:0,33,2340	0/0:27,0:25:35.95:0,36,3306	0/0:19,0:18:26.84:0,27,1606	0/0:32,0:31:63.05:0,63,3890	0/0:21,0:21:45.15:0,45,3164	0/1:7,16:23:99:1511,0,159	0/0:29,0:29:39.31:0,39,3261	1/1:4,31:35:35.45:2498,35,0	0/1:11,16:27:9.23:287,0,9	0/0:18,0:18:18.92:0,19,2038	0/1:14,0:13:6.85:7,0,956	0/1:25,0:25:3.57:4,0,1336	0/0:13,0:11:15.52:0,16,723	0/1:26,0:26:15.16:15,0,2282	0/0:24,0:24:35.93:0,36,1939	0/0:7,0:7:15.05:0,15,1090	0/0:21,0:21:17.38:0,17,1771	0/0:26,0:24:29.81:0,30,2662	0/0:23,0:23:38.01:0,38,2309	0/0:12,0:12:9.03:0,9,358
chr10	40877003	.	C	CCT	5063.34	PASS	AB=0.942;AC=27;AF=0.482;AN=56;BaseQRankSum=-6.108;DP=603;FS=1.429;HRun=0;HaplotypeScore=130.9540;InbreedingCoeff=0.4649;MQ=60.36;MQ0=25;MQRankSum=3.787;QD=12.82;ReadPosRankSum=-1.627;VQSLOD=4.6041;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:31,0:31:49.98:263,0,50	0/0:9,0:9:8.07:0,8,35	0/1:30,0:11:2.74:3,0,109	0/1:46,0:15:6.60:7,0,108	0/0:23,0:22:17.88:0,18,81	0/0:21,0:20:34.74:0,35,320	0/0:21,0:20:17.75:0,18,214	1/1:24,0:20:43.80:570,44,0	0/1:6,13:19:11.58:275,0,12	1/1:27,0:25:5.96:489,6,0	1/1:19,0:18:29.35:307,29,0	0/0:30,0:30:56.87:0,57,629	1/1:12,6:18:36.01:530,36,0	0/0:19,0:19:34.09:0,34,184	1/1:33,0:32:63.80:698,64,0	0/0:34,0:33:23.87:0,24,204	0/0:17,0:16:5.68:0,6,27	1/1:19,0:19:4.88:280,5,0	0/1:12,0:11:26.16:58,0,26	1/1:15,0:15:26.75:268,27,0	1/1:12,0:10:15.05:222,15,0	0/1:22,0:22:7.69:190,0,8	0/0:19,0:19:17.20:0,17,187	0/0:9,0:9:23.69:0,24,242	0/1:22,0:20:26.11:140,0,26	1/1:24,0:21:34.84:371,35,0	1/1:22,0:22:29.43:392,29,0	0/0:5,0:5:3:0,3,27
chr10	40877586	.	C	CT	3692.14	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=16.891;DP=723;FS=1.193;HRun=2;HaplotypeScore=106.1470;InbreedingCoeff=0.9861;MQ=77.11;MQ0=0;MQRankSum=-10.109;QD=28.40;ReadPosRankSum=1.255;VQSLOD=3.3711;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,141,1720	1/1:0,3:3:9.01:92,9,0	0/0:18,0:18:45.14:0,45,549	0/0:22,0:22:57.17:0,57,699	1/1:0,22:22:63.04:682,63,0	0/0:16,0:16:48.15:0,48,595	0/0:22,0:22:63.20:0,63,780	0/0:38,0:38:99:0,105,1282	0/0:31,0:31:87.26:0,87,1066	0/0:25,0:25:72.23:0,72,891	0/0:14,0:14:42.12:0,42,508	0/0:39,0:39:99:0,117,1438	0/0:25,0:25:75.22:0,75,917	1/1:4,36:40:99:1186,117,0	0/0:42,0:42:99:0,123,1512	1/1:2,43:45:99:1256,129,0	1/1:2,18:20:50.93:477,51,0	0/0:17,0:17:51.10:0,51,601	0/0:23,0:23:69.22:0,69,855	0/0:21,0:21:63.20:0,63,780	0/0:47,0:47:99:0,123,1524	0/0:19,0:19:54.14:0,54,643	0/0:15,0:15:42.13:0,42,520	0/0:34,0:34:99:0,99,1200	0/0:13,0:13:36.11:0,36,446	0/0:32,0:32:96.30:0,96,1191	0/0:22,0:22:66.21:0,66,818	0/0:10,0:10:30.09:0,30,371
chr10	40877589	.	GAA	G	4304.83	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=17.252;DP=722;FS=2.114;HRun=2;HaplotypeScore=117.7706;InbreedingCoeff=0.9862;MQ=77.73;MQ0=0;MQRankSum=-9.018;QD=33.63;ReadPosRankSum=1.590;VQSLOD=5.0603;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,144,2778	1/1:0,3:3:9.03:109,9,0	0/0:20,0:20:51.13:0,51,1004	0/0:21,0:21:63.22:0,63,1201	1/1:0,22:22:63.17:801,63,0	0/0:16,0:16:48.16:0,48,975	0/0:21,0:21:63.22:0,63,1263	0/0:40,0:40:99:0,114,2274	0/0:30,0:30:90.31:0,90,1815	0/0:24,0:24:72.25:0,72,1431	0/0:13,0:13:39.13:0,39,793	0/0:41,0:41:99:0,123,2477	0/0:27,0:27:81.28:0,81,1611	1/1:3,36:39:99:1310,114,0	0/0:43,0:43:99:0,129,2547	1/1:0,44:44:99:1517,132,0	1/1:1,19:20:51.11:567,51,0	0/0:17,0:17:48.16:0,48,948	0/0:25,0:25:75.26:0,75,1498	0/0:21,0:21:63.22:0,63,1259	0/0:43,0:43:99:0,129,2612	0/0:20,0:20:60.19:0,60,1174	0/0:14,0:14:42.13:0,42,815	0/0:33,0:33:99:0,99,1922	0/0:12,0:12:36.12:0,36,723	0/0:32,0:32:96.33:0,96,1932	0/0:22,0:22:66.23:0,66,1327	0/0:10,0:10:30.07:0,30,570
chr10	40877625	.	G	GGAT	6942.68	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=4.861;DP=788;FS=1.697;HRun=0;HaplotypeScore=137.2721;InbreedingCoeff=0.9888;MQ=78.48;MQ0=0;MQRankSum=-10.289;QD=47.55;ReadPosRankSum=0.383;VQSLOD=6.1845;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,132,2068	0/0:4,0:4:12.04:0,12,190	0/0:19,0:19:51.10:0,51,696	0/0:21,0:21:50.98:0,51,808	1/1:9,23:32:48.16:1046,48,0	0/0:25,0:25:72.20:0,72,1112	0/0:19,0:19:54.18:0,54,847	0/0:42,0:42:99:0,117,1814	0/0:32,0:32:93.32:0,93,1475	0/0:24,0:24:60.20:0,60,941	0/0:15,0:15:36.11:0,36,546	0/0:53,0:53:99:0,147,2282	0/0:28,0:28:81.26:0,81,1261	1/1:7,33:40:99:2120,102,0	0/0:48,0:48:99:0,141,2168	1/1:7,43:50:99:2576,120,0	1/1:3,21:24:57.67:1201,58,0	0/0:18,0:18:54.18:0,54,851	0/0:21,0:21:45.15:0,45,708	0/0:21,0:21:51.17:0,51,809	0/0:59,0:59:99:0,160,2498	0/0:17,0:17:27.08:0,27,405	0/0:11,0:11:21.07:0,21,333	0/0:34,0:34:99:0,102,1558	0/0:11,0:11:30.10:0,30,476	0/0:33,0:33:81.28:0,81,1279	0/0:27,0:26:78.27:0,78,1237	0/0:10,0:10:21.07:0,21,333
chr10	40878112	.	G	GGA	511.08	PASS	AB=0.933;AC=33;AF=0.688;AN=48;BaseQRankSum=0.638;DP=479;FS=49.618;HRun=0;HaplotypeScore=106.0676;InbreedingCoeff=0.3432;MQ=72.51;MQ0=7;MQRankSum=-0.763;QD=1.79;ReadPosRankSum=-0.993;VQSLOD=-0.3882;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:26:6.01:67,6,0	1/1:11,0:11:2.65:21,3,0	./.	./.	1/1:15,0:15:3.01:42,3,0	0/0:32,0:31:10.79:0,11,50	0/1:8,0:8:0:0,0,0	1/1:20,0:20:0.89:2,1,0	0/0:13,0:13:14.82:0,15,142	1/1:10,0:9:4.36:28,4,0	./.	1/1:20,0:20:3:26,3,0	0/0:19,0:20:11.83:0,12,99	1/1:14,0:14:3.01:41,3,0	1/1:19,0:22:3:26,3,0	0/1:18,5:24:26.12:38,0,26	0/0:15,0:15:9:0,9,88	1/1:18,0:18:14.77:85,15,0	1/1:9,0:9:3:27,3,0	0/1:18,0:18:17.92:18,0,26	1/1:15,5:21:3.01:44,3,0	1/1:10,0:12:3:26,3,0	./.	0/0:15,0:16:2.84:0,3,14	1/1:11,0:11:9.02:110,9,0	0/0:20,0:20:1.87:0,2,7	1/1:12,3:15:3.48:45,3,0	1/1:10,0:10:2.19:5,2,0
chr10	40879513	.	GAA	G	10893.58	PASS	AB=1.000;AC=35;AF=0.625;AN=56;BaseQRankSum=-5.523;DP=624;FS=2.873;HRun=8;HaplotypeScore=96.4387;InbreedingCoeff=0.9562;MQ=68.86;MQ0=1;MQRankSum=-0.574;QD=29.05;ReadPosRankSum=3.392;VQSLOD=4.9935;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,42:46:99:1207,99,0	1/1:1,10:11:30.09:366,30,0	0/0:19,0:14:31.84:0,32,415	0/1:21,0:14:1.03:1,0,242	0/0:7,0:20:22.14:0,22,269	1/1:0,18:18:48.04:564,48,0	1/1:2,17:19:42.13:512,42,0	1/1:2,26:28:75.17:860,75,0	0/0:22,1:23:23.87:0,24,709	1/1:3,20:23:60.17:719,60,0	1/1:1,8:9:24.07:293,24,0	0/0:34,0:34:96.30:0,96,1542	0/0:27,0:28:70.34:0,70,946	0/0:7,0:23:30.98:0,31,379	1/1:2,24:26:66.18:805,66,0	0/0:6,0:23:53.89:0,54,484	0/0:6,0:40:59.95:0,60,588	1/1:0,19:19:54.17:659,54,0	1/1:0,12:12:33.09:390,33,0	1/1:3,16:19:45.06:528,45,0	1/1:3,21:24:61.43:735,61,0	1/1:1,19:20:51.16:622,51,0	0/0:14,0:14:36.08:0,36,560	0/0:24,0:24:69.24:0,69,1142	1/1:4,22:26:57.17:695,57,0	1/1:0,31:31:93.29:1134,93,0	1/1:0,15:14:42.13:512,42,0	1/1:0,8:8:24.08:293,24,0
chr10	40879521	.	AC	A	1630.45	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-1.955;DP=637;FS=0.403;HRun=1;HaplotypeScore=122.4565;InbreedingCoeff=0.9626;MQ=70.70;MQ0=1;MQRankSum=-0.107;QD=10.66;ReadPosRankSum=-4.046;VQSLOD=0.0819;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:91.16:0,91,375	0/0:10,0:10:22.21:0,22,96	0/0:27,0:18:10.92:0,11,324	0/0:26,0:18:18.63:0,19,251	1/1:19,0:19:34.79:246,35,0	0/0:20,0:20:46.43:0,46,214	0/0:19,0:19:43.36:0,43,206	0/0:29,0:29:49.48:0,49,266	1/1:22,3:25:6.28:246,6,0	0/0:21,0:21:53.13:0,53,255	0/0:11,0:11:29.11:0,29,147	0/0:31,0:31:93.26:0,93,1199	1/1:23,3:26:12.20:233,12,0	1/1:21,1:22:42.40:290,42,0	0/0:25,0:25:55.73:0,56,237	1/1:23,0:23:65.19:464,65,0	1/1:38,0:38:50.71:333,51,0	0/0:21,0:21:53.67:0,54,238	0/0:15,0:15:30.95:0,31,207	0/0:20,0:20:35.27:0,35,216	0/0:25,0:25:65.24:0,65,306	0/0:21,0:21:47.56:0,48,218	0/0:12,0:12:36.10:0,36,457	0/0:23,0:23:69.15:0,69,860	0/0:24,0:24:56.35:0,56,260	0/0:36,0:36:97.08:0,97,492	0/0:15,0:14:33.46:0,33,130	0/0:9,0:9:24.15:0,24,105
chr10	40880695	.	TTTCCCC	T	271.96	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=0.631;DP=629;FS=4.031;HRun=0;HaplotypeScore=155.9240;InbreedingCoeff=0.9621;MQ=83.61;MQ0=0;MQRankSum=-3.786;QD=38.85;ReadPosRankSum=1.067;VQSLOD=3.6861;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,108,3626	1/1:0,7:7:15.05:360,15,0	0/0:19,0:19:57.03:0,57,1846	0/0:23,0:23:60.21:0,60,1935	0/0:11,0:11:33.11:0,33,1188	0/0:14,0:14:42.13:0,42,1375	0/0:37,0:37:99:0,108,3666	0/0:27,0:27:78.25:0,78,2417	0/0:23,0:23:66.23:0,66,2299	0/0:24,0:24:66.23:0,66,2283	0/0:7,0:7:18.06:0,18,610	0/0:33,0:33:99:0,99,3526	0/0:26,0:26:78.27:0,78,2800	0/0:35,0:35:96.33:0,96,3413	0/0:30,0:30:84.29:0,84,2998	0/0:30,0:30:90.31:0,90,3175	0/0:17,0:17:51.11:0,51,1466	0/0:27,0:27:78.27:0,78,2751	0/0:22,0:22:60.21:0,60,2160	0/0:12,0:12:36.12:0,36,1296	0/0:56,0:56:99:0,160,5652	0/0:20,0:20:60.21:0,60,2066	0/0:6,0:6:18.06:0,18,599	0/0:37,0:37:99:0,111,3816	0/0:7,0:7:21.07:0,21,742	0/0:21,0:21:60.17:0,60,1998	0/0:13,0:13:39.08:0,39,1209	0/0:8,0:8:24.08:0,24,864
chr10	40881091	.	A	AGT	17492.24	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=-1.416;DP=665;FS=2.096;HRun=0;HaplotypeScore=84.1924;InbreedingCoeff=0.9999;MQ=84.09;MQ0=0;MQRankSum=-3.590;QD=44.62;ReadPosRankSum=0.200;VQSLOD=5.9631;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,38:42:96.33:1703,96,0	0/0:13,0:13:39.10:0,39,516	0/0:23,0:22:57.04:0,57,709	0/0:19,0:19:51.16:0,51,684	0/0:19,0:19:57.19:0,57,782	1/1:2,22:24:57.20:1011,57,0	1/1:2,12:14:33.11:585,33,0	1/1:4,31:36:96.30:1630,96,0	0/0:28,0:28:78.25:0,78,1055	1/1:2,28:30:84.26:1426,84,0	1/1:0,16:16:42.14:745,42,0	0/0:24,0:24:63.20:0,63,849	0/0:25,0:25:72.22:0,72,971	0/0:22,0:22:63.21:0,63,865	1/1:2,27:29:75.26:1330,75,0	0/0:29,0:29:78.26:0,78,1072	0/0:26,0:26:72.24:0,72,988	1/1:2,19:21:57.20:1009,57,0	1/1:5,16:21:48.16:851,48,0	1/1:0,18:18:51.17:902,51,0	1/1:2,25:27:69.24:1224,69,0	1/1:0,19:20:48.16:851,48,0	0/0:19,0:19:54.18:0,54,740	0/0:26,0:26:75.25:0,75,1030	1/1:3,18:21:51.17:897,51,0	1/1:2,26:28:78.22:1314,78,0	1/1:2,23:25:66.23:1163,66,0	1/1:2,18:20:48.16:851,48,0
chr10	40881545	.	TA	T	7250.26	PASS	AB=0.969;AC=34;AF=0.607;AN=56;BaseQRankSum=10.937;DP=574;FS=0.000;HRun=10;HaplotypeScore=58.3363;InbreedingCoeff=0.8799;MQ=75.80;MQ0=0;MQRankSum=-0.372;QD=19.18;ReadPosRankSum=2.483;VQSLOD=5.5688;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,32:35:86.97:755,87,0	0/0:5,0:5:15.04:0,15,166	0/1:13,0:11:0.83:1,0,162	0/1:14,1:14:19.03:19,0,170	0/0:30,1:31:49.12:0,49,749	1/1:2,19:21:50.98:443,51,0	1/1:3,14:17:35.99:312,36,0	1/1:5,25:30:74.96:645,75,0	0/0:20,0:20:57.14:0,57,622	1/1:1,18:19:53.94:457,54,0	1/1:4,15:19:41.66:364,42,0	0/0:24,0:25:65.97:0,66,686	0/0:16,0:16:42.05:0,42,449	0/0:13,0:13:13.07:0,13,192	1/1:1,19:20:44.99:391,45,0	0/0:25,1:26:40.02:0,40,637	0/0:26,0:26:63.16:0,63,688	1/1:2,20:22:56.99:495,57,0	1/1:6,15:21:44.90:375,45,0	1/1:0,14:14:38.98:338,39,0	1/1:2,26:28:65.99:573,66,0	1/1:4,19:23:53.78:449,54,0	0/0:17,0:17:45.06:0,45,463	0/0:17,0:17:44.99:0,45,460	1/1:1,16:17:41.99:365,42,0	1/1:2,22:24:65.96:566,66,0	1/1:1,19:20:38.99:338,39,0	1/1:4,16:20:41.95:364,42,0
chr10	40882147	.	GA	G	1639.37	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.668;DP=738;FS=9.575;HRun=2;HaplotypeScore=67.4884;InbreedingCoeff=0.9989;MQ=88.98;MQ0=0;MQRankSum=-3.570;QD=38.12;ReadPosRankSum=0.206;VQSLOD=3.7376;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:31:93.32:0,93,1481	0/0:8,0:8:24.08:0,24,384	0/0:26,0:26:78.25:0,78,1182	0/0:27,0:27:78.21:0,78,1175	0/0:41,0:41:99:0,123,1942	1/1:0,26:26:78.26:1090,78,0	1/1:0,17:17:48.16:671,48,0	0/0:39,0:38:99:0,117,1869	0/0:27,0:27:81.26:0,81,1272	0/0:31,0:31:87.30:0,87,1388	0/0:31,0:31:93.32:0,93,1485	0/0:23,0:23:66.21:0,66,1024	0/0:26,0:26:78.27:0,78,1240	0/0:18,0:18:54.17:0,54,838	0/0:38,0:38:99:0,114,1823	0/0:31,0:31:93.25:0,93,1347	0/0:35,0:35:99:0,105,1651	0/0:19,0:19:57.17:0,57,878	0/0:21,0:21:63.21:0,63,991	0/0:26,0:26:78.27:0,78,1239	0/0:23,0:23:69.21:0,69,1062	0/0:22,0:22:66.19:0,66,1007	0/0:26,0:26:78.25:0,78,1223	0/0:24,0:24:72.25:0,72,1151	0/0:18,0:18:54.16:0,54,838	0/0:32,0:32:93.32:0,93,1487	0/0:34,0:34:99:0,102,1629	0/0:17,0:17:45.15:0,45,719
chr10	40882495	.	CT	C	9306.29	PASS	AB=0.975;AC=48;AF=0.857;AN=56;BaseQRankSum=6.860;DP=608;FS=0.465;HRun=11;HaplotypeScore=67.2831;InbreedingCoeff=0.7686;MQ=78.36;MQ0=0;MQRankSum=-2.788;QD=17.33;ReadPosRankSum=3.099;VQSLOD=5.8562;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,19:22:44.93:369,45,0	1/1:1,7:8:17.97:148,18,0	0/1:18,1:17:2.29:2,0,195	0/1:12,0:13:25.02:25,0,119	1/1:6,26:32:74.75:600,75,0	1/1:4,23:27:62.92:516,63,0	1/1:4,10:14:29.96:246,30,0	1/1:11,23:34:39.80:518,40,0	1/1:2,19:21:56.93:468,57,0	1/1:9,20:30:62.82:508,63,0	1/1:3,20:23:56.65:441,57,0	0/0:31,0:31:78.10:0,78,790	1/1:3,18:21:50.92:418,51,0	1/1:4,24:28:59.92:493,60,0	1/1:2,28:30:65.92:542,66,0	1/1:1,19:20:44.93:369,45,0	1/1:0,21:21:44.95:369,45,0	1/1:1,8:9:20.98:172,21,0	1/1:4,12:17:37.98:301,38,0	1/1:5,17:22:44.87:364,45,0	1/1:2,14:16:35.94:296,36,0	1/1:0,12:12:32.96:271,33,0	0/0:22,0:22:51.08:0,51,521	0/0:18,0:18:51.03:0,51,520	1/1:3,21:24:53.93:443,54,0	1/1:6,24:31:73.90:588,74,0	1/1:2,26:28:68.92:567,69,0	1/1:3,12:15:32.96:271,33,0
chr10	40883493	.	TTA	T	4652.98	PASS	AB=0.957;AC=31;AF=0.554;AN=56;BaseQRankSum=3.447;DP=698;FS=26.620;HRun=0;HaplotypeScore=122.0510;InbreedingCoeff=-0.2356;MQ=66.92;MQ0=4;MQRankSum=0.148;QD=7.54;ReadPosRankSum=4.500;VQSLOD=2.7897;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:24,2:26:23.40:220,0,23	0/1:16,0:16:65.22:65,0,94	0/1:16,0:10:10.51:11,0,116	0/0:22,0:12:11.35:0,11,99	0/1:24,0:24:17.28:17,0,257	1/1:17,1:18:25.06:267,25,0	1/1:28,0:28:62.58:467,63,0	0/1:31,4:34:44.30:520,0,44	0/1:33,0:32:62.11:238,0,62	0/1:26,1:27:27.41:259,0,27	1/1:23,0:23:18.09:177,18,0	0/0:23,0:23:63.11:0,63,838	0/1:21,2:23:21.86:140,0,22	0/1:33,0:34:39.76:40,0,288	0/1:34,1:35:17.69:168,0,18	0/1:33,0:33:87.50:88,0,307	0/1:28,0:28:5.65:6,0,183	0/1:21,1:22:14.87:88,0,15	0/1:10,1:9:11.64:86,0,12	1/1:40,1:40:20.34:460,20,0	1/1:16,0:16:34.42:184,34,0	0/1:22,2:23:20.14:255,0,20	0/0:20,0:20:58.03:0,58,780	0/0:16,0:16:45.39:0,45,574	0/1:26,2:28:9.30:171,0,9	1/1:21,3:24:0.27:305,0,0	0/1:37,4:41:60.75:397,0,61	1/1:9,0:9:7.45:27,7,0
chr10	40883494	.	TA	T	11035.98	PASS	AB=0.923;AC=45;AF=0.804;AN=56;BaseQRankSum=-5.246;DP=668;FS=1.574;HRun=3;HaplotypeScore=87.2138;InbreedingCoeff=0.8667;MQ=68.48;MQ0=4;MQRankSum=0.058;QD=19.36;ReadPosRankSum=-0.919;VQSLOD=4.2817;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:15,12:27:54.24:620,54,0	1/1:13,3:16:14.31:208,14,0	0/0:18,0:11:16.06:0,16,148	0/0:20,0:12:6.88:0,7,60	0/1:22,2:24:4.83:91,0,5	1/1:2,16:18:36.04:418,36,0	1/1:0,28:28:63.20:767,63,0	1/1:30,5:35:92.57:809,93,0	1/1:15,18:32:72.08:850,72,0	1/1:4,19:23:59.96:589,60,0	1/1:6,14:20:49.55:577,50,0	0/0:23,0:23:57.09:0,57,606	1/1:5,15:20:35.97:392,36,0	1/1:32,2:34:18.04:254,18,0	1/1:4,28:32:60.05:688,60,0	1/1:32,0:32:17.25:193,17,0	1/1:26,2:28:18.73:194,19,0	1/1:4,18:22:31.16:379,31,0	1/1:8,1:7:17.92:165,18,0	1/1:24,13:36:85.66:869,86,0	1/1:7,9:16:42.07:459,42,0	1/1:15,7:21:39.18:452,39,0	0/0:20,0:20:30.78:0,31,514	0/0:16,0:16:34.77:0,35,372	1/1:4,24:28:59.99:679,60,0	1/1:7,15:22:50.80:425,51,0	1/1:23,13:36:80.16:849,80,0	1/1:0,8:8:9.03:110,9,0
chr10	40885075	.	A	AC	248.31	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-4.206;DP=379;FS=0.000;HRun=7;HaplotypeScore=65.0702;InbreedingCoeff=0.8800;MQ=76.08;MQ0=0;MQRankSum=0.569;QD=20.69;ReadPosRankSum=1.332;VQSLOD=3.0898;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:45.03:0,45,426	0/0:2,0:2:6.01:0,6,58	0/0:17,0:19:30.61:0,31,280	0/0:13,0:13:27.03:0,27,257	0/0:9,0:9:27.04:0,27,259	0/0:19,0:19:45.05:0,45,428	0/0:13,0:13:33.05:0,33,318	0/0:26,0:26:66.08:0,66,632	1/1:0,5:5:12.04:145,12,0	0/0:13,0:13:30.03:0,30,285	0/0:10,0:10:30.05:0,30,289	0/0:13,0:13:33.05:0,33,319	1/1:0,7:7:18.06:217,18,0	0/0:13,0:13:36.06:0,36,347	0/0:7,0:7:18.03:0,18,174	0/0:11,0:11:30.05:0,30,289	0/0:26,0:26:66.07:0,66,627	0/0:10,0:10:30.03:0,30,282	0/0:17,0:17:33.03:0,33,318	0/0:12,0:12:30.04:0,30,290	0/0:19,0:19:42.01:0,42,392	0/0:6,0:6:12.01:0,12,116	0/0:5,0:5:12.02:0,12,116	0/0:8,0:8:12.01:0,12,116	0/0:17,0:17:36.51:0,37,348	0/0:19,0:19:54.08:0,54,521	0/0:18,0:18:51.06:0,51,486	0/0:20,0:20:60.10:0,60,579
chr10	40885113	.	C	CT	1607.27	PASS	AB=0.807;AC=18;AF=0.321;AN=56;BaseQRankSum=-4.320;DP=352;FS=2.464;HRun=11;HaplotypeScore=50.4749;InbreedingCoeff=0.2476;MQ=62.33;MQ0=9;MQRankSum=1.591;QD=9.18;ReadPosRankSum=-0.025;VQSLOD=2.0839;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:24,3:27:16.52:17,0,434	1/1:1,0:3:5.68:29,6,0	0/0:10,0:8:3.24:0,3,26	0/0:7,0:5:5.96:0,6,46	0/1:2,11:13:16.42:214,0,16	1/1:3,19:22:7.64:441,8,0	1/1:3,3:6:9.02:91,9,0	0/0:28,1:29:26.38:0,26,382	0/0:4,0:4:5.95:0,6,46	0/0:12,0:12:23.90:0,24,186	0/0:14,0:14:29.88:0,30,232	0/0:11,0:11:23.90:0,24,186	0/0:3,0:3:2.99:0,3,23	1/1:1,6:7:18.04:183,18,0	0/1:8,1:9:15.38:15,0,76	0/1:3,4:7:26.29:104,0,26	1/1:6,24:29:22.68:592,23,0	0/1:8,3:11:43.28:43,0,62	0/0:17,2:15:5.43:0,5,224	0/0:8,0:8:17.92:0,18,139	0/1:6,2:8:45.91:46,0,55	0/0:2,0:2:5.98:0,6,46	0/0:6,1:7:14.93:0,15,116	0/0:2,0:2:5.98:0,6,46	0/1:11,1:13:0.98:1,0,160	0/1:17,1:17:1.20:1,0,164	0/0:21,0:22:43.84:0,44,330	0/0:24,0:24:52.82:0,53,400
chr10	40885382	.	TTTTG	T	8480.62	PASS	AB=0.667;AC=31;AF=0.554;AN=56;BaseQRankSum=3.439;DP=538;FS=4.063;HRun=0;HaplotypeScore=132.8653;InbreedingCoeff=0.9293;MQ=60.26;MQ0=3;MQRankSum=-6.228;QD=27.36;ReadPosRankSum=1.530;VQSLOD=4.9217;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,21:33:41.61:589,42,0	0/0:8,0:8:24.05:0,24,486	0/0:19,0:16:30.44:0,30,547	0/0:13,0:10:11.78:0,12,211	0/0:1,0:19:51.17:0,51,897	1/1:1,13:14:18.06:294,18,0	1/1:3,11:14:18.02:265,18,0	1/1:11,11:22:33.10:504,33,0	0/0:16,0:16:39.13:0,39,901	1/1:4,13:16:36.12:567,36,0	1/1:3,12:15:32.98:452,33,0	0/0:28,0:28:66.22:0,66,1474	0/0:20,0:20:51.16:0,51,1152	0/0:8,0:19:30.10:0,30,518	1/1:7,21:28:54.18:882,54,0	0/0:7,0:25:57.19:0,57,973	0/0:9,0:31:59.69:0,60,952	0/1:8,8:16:3.53:273,0,4	1/1:12,10:21:30.05:436,30,0	1/1:1,15:16:45.07:677,45,0	1/1:1,6:7:12:167,12,0	1/1:3,8:11:21.07:343,21,0	0/0:17,0:17:42.14:0,42,989	0/0:11,0:11:24.06:0,24,533	1/1:6,19:25:42.10:657,42,0	1/1:8,21:29:66.21:1052,66,0	1/1:7,28:35:72.25:1176,72,0	1/1:3,3:6:9.03:147,9,0
chr10	40886174	.	GT	G	11378.16	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=16.247;DP=646;FS=0.954;HRun=6;HaplotypeScore=73.3418;InbreedingCoeff=0.9984;MQ=71.01;MQ0=0;MQRankSum=-5.234;QD=29.40;ReadPosRankSum=1.334;VQSLOD=5.5265;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,25:26:75.16:832,75,0	0/0:10,0:10:30.10:0,30,410	0/0:9,0:9:24.03:0,24,303	0/0:17,0:17:48.15:0,48,626	0/0:35,0:35:99:0,102,1360	1/1:0,17:17:42.12:476,42,0	1/1:1,21:22:54.15:613,54,0	1/1:5,17:22:48.14:544,48,0	0/0:24,0:24:69.23:0,69,935	1/1:1,35:36:99:1157,102,0	1/1:0,29:29:78.22:881,78,0	0/0:25,0:25:75.24:0,75,1010	0/0:19,0:19:57.18:0,57,761	0/0:20,0:20:60.17:0,60,787	1/1:0,26:26:72.21:817,72,0	0/0:39,0:39:99:0,114,1543	0/0:19,0:19:51.13:0,51,662	1/1:3,6:9:17.73:203,18,0	1/1:2,32:34:98.95:1062,99,0	1/1:0,24:24:63.18:709,63,0	1/1:1,13:14:33.09:374,33,0	1/1:1,23:24:63.18:714,63,0	0/0:26,0:26:75.24:0,75,1010	0/0:16,0:16:48.12:0,48,635	1/1:1,28:29:72.20:814,72,0	1/1:0,21:21:63.18:715,63,0	1/1:2,35:37:90.17:990,90,0	1/1:3,14:17:42.12:476,42,0
chr10	40886495	.	TAAAAA	T	4807.72	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=6.422;DP=482;FS=6.833;HRun=19;HaplotypeScore=116.4407;InbreedingCoeff=0.9313;MQ=66.90;MQ0=1;MQRankSum=-9.198;QD=18.93;ReadPosRankSum=3.291;VQSLOD=1.0324;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,16:22:30.65:391,31,0	0/0:3,0:9:5.04:0,5,57	0/0:32,0:16:20.80:0,21,318	0/0:13,0:9:11.90:0,12,153	0/0:13,0:20:44.40:0,44,425	0/0:3,0:14:6.33:0,6,63	0/0:3,0:12:11.22:0,11,60	1/1:12,16:29:50.19:629,50,0	0/0:8,0:15:27.98:0,28,515	1/1:8,10:17:26.60:354,27,0	1/1:8,5:14:14.04:152,14,0	0/0:13,0:16:39.13:0,39,859	0/0:15,0:22:54.14:0,54,886	0/0:15,0:17:22.95:0,23,271	1/1:6,12:18:23.60:336,24,0	0/0:8,0:14:20.99:0,21,344	0/0:2,0:14:29.74:0,30,293	1/1:5,4:9:5.66:84,6,0	1/1:3,5:8:17.67:206,18,0	1/1:13,10:23:29.02:370,29,0	1/1:4,7:11:13.13:161,13,0	1/1:5,10:16:26.14:312,26,0	0/0:16,0:16:18.06:0,18,411	0/0:8,0:13:27.09:0,27,550	1/1:5,13:20:35.55:437,36,0	1/1:3,13:16:38.09:505,38,0	1/1:12,21:33:45.56:662,46,0	1/1:10,6:16:14.32:209,14,0
chr10	40888078	.	A	AGC	245.42	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=0.699;DP=608;FS=1.450;HRun=0;HaplotypeScore=95.7695;InbreedingCoeff=0.9876;MQ=91.72;MQ0=0;MQRankSum=-1.328;QD=30.68;ReadPosRankSum=-0.117;VQSLOD=5.3060;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,117,1718	1/1:1,7:8:18.06:336,18,0	0/0:21,0:22:51.15:0,51,716	0/0:33,0:33:78.13:0,78,1048	0/0:14,0:14:36.12:0,36,528	0/0:17,0:17:51.17:0,51,751	0/0:29,0:29:87.28:0,87,1258	0/0:30,0:30:81.23:0,81,1105	0/0:17,0:17:51.17:0,51,751	0/0:19,0:19:57.19:0,57,837	0/0:13,0:13:36.12:0,36,530	0/0:28,0:28:81.27:0,81,1192	0/0:21,0:21:63.21:0,63,927	0/0:22,0:22:63.21:0,63,927	0/0:22,0:21:63.20:0,63,910	0/0:32,0:32:96.30:0,96,1392	0/0:31,0:31:84.28:0,84,1234	0/0:10,0:10:27.09:0,27,397	0/0:21,0:21:57.19:0,57,839	0/0:13,0:13:39.13:0,39,574	0/0:17,0:17:42.14:0,42,619	0/0:8,0:8:24.08:0,24,353	0/0:24,0:24:72.24:0,72,1059	0/0:30,0:30:84.28:0,84,1237	0/0:18,0:18:51.14:0,51,711	0/0:26,0:26:78.26:0,78,1120	0/0:35,0:35:99:0,102,1499	0/0:9,0:9:27.09:0,27,398
chr10	40888241	.	C	CT	2969.95	PASS	AB=0.842;AC=34;AF=0.607;AN=56;BaseQRankSum=3.286;DP=479;FS=5.995;HRun=6;HaplotypeScore=82.3645;InbreedingCoeff=0.3995;MQ=64.56;MQ0=7;MQRankSum=-2.708;QD=8.30;ReadPosRankSum=-3.625;VQSLOD=-0.0013;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,9:14:12.51:143,13,0	0/1:15,0:16:10.63:68,0,11	0/0:26,0:16:21.68:0,22,219	0/1:19,0:15:0.38:0,0,144	0/1:30,3:32:7.78:8,0,356	0/1:3,0:12:6.29:14,0,6	0/1:10,2:12:28.65:29,0,223	1/1:21,16:35:38.49:473,38,0	0/0:15,0:15:42.09:0,42,427	1/1:7,10:15:21.17:257,21,0	1/1:4,11:14:18.05:201,18,0	0/0:21,0:21:54.11:0,54,548	0/0:12,0:12:27.05:0,27,274	0/0:10,0:8:11.27:0,11,90	1/1:5,8:11:15.05:186,15,0	0/1:17,4:21:80.86:81,0,212	0/1:16,2:13:40.50:41,0,172	1/1:3,5:8:8.89:84,9,0	1/1:15,20:33:55.74:633,56,0	0/1:5,6:11:15.51:125,0,16	1/1:2,4:6:3.01:32,3,0	1/1:1,3:4:6.02:72,6,0	0/0:28,0:27:69.14:0,69,697	0/0:9,0:9:24.01:0,24,233	1/1:2,8:10:6.02:76,6,0	1/1:16,6:20:26.17:277,26,0	1/1:11,14:25:17.31:224,17,0	1/1:5,3:8:12.03:139,12,0
chr10	40888244	.	T	TC	577.08	PASS	AB=0.973;AC=16;AF=0.286;AN=56;BaseQRankSum=3.741;DP=464;FS=27.840;HRun=0;HaplotypeScore=86.7693;InbreedingCoeff=-0.2778;MQ=63.64;MQ0=7;MQRankSum=-0.975;QD=2.53;ReadPosRankSum=0.870;VQSLOD=1.2456;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:16,0:14:32.47:32,0,94	0/1:6,9:15:12.70:167,0,13	0/0:27,0:17:26.14:0,26,410	0/0:19,0:14:12.79:0,13,292	0/0:35,0:34:69.55:0,70,802	0/0:12,0:12:13.97:0,14,97	0/0:13,0:13:14.81:0,15,394	0/1:35,0:33:76.85:77,0,205	0/0:16,0:16:48.14:0,48,640	0/1:16,0:14:40.94:41,0,77	0/1:15,0:14:46.18:46,0,62	0/0:21,0:21:60.18:0,60,807	0/0:12,0:12:36.10:0,36,457	0/0:10,0:8:14.97:0,15,170	0/1:13,0:11:47.79:55,0,48	0/0:18,0:18:2.50:0,2,363	0/0:18,0:13:6.65:0,7,306	0/1:8,0:8:15.53:16,0,32	0/1:33,0:31:99:112,0,218	0/1:9,0:9:30.10:30,0,69	1/1:4,0:4:2.74:12,3,0	0/1:3,0:3:11.49:16,0,11	0/0:26,0:25:75.23:0,75,1015	0/0:9,0:9:24.08:0,24,334	0/1:10,0:10:8.16:8,0,34	0/1:22,0:20:30.85:31,0,212	0/1:23,0:23:52:52,0,148	0/1:6,0:6:23.94:38,0,24
chr10	40888247	.	TC	T	1486.53	PASS	AB=0.981;AC=33;AF=0.589;AN=56;BaseQRankSum=8.395;DP=452;FS=5.731;HRun=1;HaplotypeScore=83.1575;InbreedingCoeff=0.2834;MQ=62.66;MQ0=7;MQRankSum=-4.854;QD=4.55;ReadPosRankSum=-2.552;VQSLOD=-0.6198;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:13:10.12:67,10,0	1/1:13,1:14:25.26:160,25,0	0/0:31,0:19:20.25:0,20,290	0/1:18,1:13:31.35:31,0,129	0/1:34,1:34:84.07:230,0,84	0/0:12,0:12:4.33:0,4,20	0/1:13,0:13:10.90:11,0,90	1/1:34,0:32:46.06:235,46,0	0/0:17,0:17:51.12:0,51,598	1/1:15,0:13:24.83:136,25,0	1/1:13,0:12:6.52:36,7,0	0/0:21,0:21:62.97:0,63,682	0/0:10,0:10:30.04:0,30,349	0/1:10,0:8:1.19:1,0,37	0/1:11,0:9:0.69:16,0,1	0/1:19,0:19:35.08:35,0,82	0/1:17,2:14:37.81:135,0,38	1/1:8,0:8:1.26:12,1,0	1/1:30,0:28:40.88:252,41,0	0/1:8,0:8:22.01:49,0,22	1/1:4,0:4:2.84:14,3,0	0/1:3,0:3:3.14:11,0,3	0/0:24,0:23:69.21:0,69,855	0/0:10,0:10:27.07:0,27,326	1/1:10,0:10:3.59:61,4,0	1/1:19,0:17:14.04:96,14,0	1/1:22,0:22:5.27:72,5,0	1/1:6,0:6:0.97:5,1,0
chr10	40888248	.	CT	C	441.37	PASS	AB=0.874;AC=10;AF=0.179;AN=56;BaseQRankSum=0.795;DP=453;FS=6.801;HRun=8;HaplotypeScore=87.8283;InbreedingCoeff=0.1364;MQ=61.30;MQ0=7;MQRankSum=-2.025;QD=3.32;ReadPosRankSum=-1.173;VQSLOD=-0.5426;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:12:18.18:0,18,102	0/0:14,0:14:16.59:0,17,115	0/0:31,0:18:23.35:0,23,255	0/1:20,0:13:3.54:4,0,113	0/1:21,9:34:20.10:231,0,20	0/1:11,0:12:6.98:7,0,13	0/1:8,2:13:36.01:98,0,36	0/0:33,0:31:29.67:0,30,182	0/0:17,0:17:48.09:0,48,551	0/0:15,0:13:10.06:0,10,68	0/0:13,0:12:11.26:0,11,52	0/0:21,0:21:51.14:0,51,600	0/0:11,0:11:30.08:0,30,351	0/1:6,4:8:16.37:21,0,16	0/0:11,0:9:13.48:0,13,77	0/1:13,3:20:54.10:54,0,80	1/1:15,4:14:17.21:158,17,0	0/0:8,0:8:5.24:0,5,57	0/0:30,0:28:31.94:0,32,212	0/0:8,0:8:6.86:0,7,58	1/1:4,0:4:0.47:1,0,0	0/0:3,0:3:2.99:0,3,24	0/0:24,0:23:66.20:0,66,797	0/0:10,0:10:27.08:0,27,326	0/0:10,0:10:5.76:0,6,43	0/0:19,0:17:31.54:0,32,197	0/0:22,0:22:29.16:0,29,197	0/0:6,0:6:14.79:0,15,96
chr10	40888255	.	TTC	T	1272.20	PASS	AB=0.975;AC=30;AF=0.536;AN=56;BaseQRankSum=5.082;DP=420;FS=5.494;HRun=0;HaplotypeScore=86.5549;InbreedingCoeff=0.0884;MQ=64.98;MQ0=7;MQRankSum=-5.097;QD=4.34;ReadPosRankSum=-5.213;VQSLOD=0.2247;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:11:11.65:70,12,0	0/1:12,0:12:17.02:49,0,17	0/0:35,0:22:45.71:0,46,371	0/1:22,0:15:5.77:6,0,214	0/1:31,1:31:16.13:201,0,16	0/1:9,0:9:8.64:22,0,9	0/0:9,0:9:4.90:0,5,24	0/1:28,4:30:7.86:206,0,8	0/0:17,0:17:42.07:0,42,654	1/1:10,2:10:4.06:80,4,0	1/1:10,1:10:3.22:29,3,0	0/0:20,0:20:57.10:0,57,772	0/0:10,0:10:30.10:0,30,465	0/1:11,0:9:9.54:33,0,10	1/1:10,0:8:3.27:15,3,0	0/1:18,0:18:18.61:64,0,19	1/1:17,0:12:17.37:150,17,0	0/1:8,0:8:7.84:32,0,8	1/1:24,0:22:7.39:179,7,0	0/1:5,0:5:4.61:5,0,53	1/1:3,0:3:2.97:20,3,0	1/1:4,0:4:8.90:65,9,0	0/0:24,0:23:69.17:0,69,983	0/0:12,0:12:33.08:0,33,458	0/1:8,1:9:3:48,0,3	1/1:18,1:17:1.60:81,2,0	0/1:15,1:16:33.21:71,0,33	0/1:6,0:6:8.30:20,0,8
chr10	40888348	.	ATAG	A	4737.11	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=6.912;DP=509;FS=16.812;HRun=0;HaplotypeScore=80.8642;InbreedingCoeff=0.9969;MQ=89.28;MQ0=0;MQRankSum=-2.329;QD=34.83;ReadPosRankSum=4.030;VQSLOD=4.4712;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:66.23:0,66,1446	0/0:9,0:9:24.04:0,24,482	0/0:18,0:18:48.16:0,48,949	0/0:25,0:25:48.53:0,49,1078	1/1:0,14:14:33.11:529,33,0	1/1:2,7:9:21.07:326,21,0	1/1:1,17:18:33.11:530,33,0	0/0:16,0:16:45.15:0,45,992	1/1:1,22:23:48.16:770,48,0	0/0:15,0:15:39.13:0,39,859	0/0:9,0:9:27.09:0,27,594	0/0:31,0:31:87.30:0,87,1889	1/1:0,20:20:54.18:856,54,0	1/1:1,16:17:39.13:625,39,0	0/0:27,0:27:81.28:0,81,1787	1/1:2,19:21:42.14:675,42,0	1/1:1,13:14:27.09:424,27,0	0/0:16,0:16:45.15:0,45,993	0/0:20,0:20:48.15:0,48,981	0/0:19,0:19:48.16:0,48,1058	0/0:26,0:26:72.25:0,72,1590	0/0:13,0:13:30.09:0,30,618	0/0:26,0:26:72.23:0,72,1546	0/0:21,0:21:60.21:0,60,1318	0/0:10,0:10:27.09:0,27,596	0/0:18,0:17:51.17:0,51,1098	0/0:24,0:24:69.24:0,69,1510	0/0:6,0:6:18.06:0,18,397
chr10	40888689	.	GC	G	539.40	PASS	AC=26;AF=0.929;AN=28;BaseQRankSum=-2.483;DP=38;FS=0.000;HRun=1;HaplotypeScore=8.5130;InbreedingCoeff=0.1069;MQ=108.47;MQ0=0;MQRankSum=-2.557;QD=18.60;ReadPosRankSum=-2.335;VQSLOD=2.8429;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,0:2:3.01:33,3,0	1/1:1,0:1:2.98:22,3,0	1/1:2,5:7:2.51:165,3,0	0/0:2,1:2:5.98:0,6,54	./.	1/1:1,0:1:3.01:41,3,0	./.	1/1:3,0:3:6.01:66,6,0	./.	./.	./.	./.	./.	1/1:2,0:2:5.98:61,6,0	./.	./.	./.	./.	1/1:2,0:2:5.99:49,6,0	1/1:3,0:3:5.80:40,6,0	1/1:1,0:1:3.01:41,3,0	./.	./.	1/1:2,0:2:3.01:40,3,0	1/1:2,0:2:2.99:23,3,0	1/1:2,0:2:2.99:24,3,0	1/1:1,0:1:2.97:20,3,0	./.
chr10	40889140	.	AACACAC	A	75.07	PASS	AB=1.000;AC=4;AF=0.091;AN=44;BaseQRankSum=4.035;DP=531;FS=1.385;HRun=0;HaplotypeScore=120.8812;InbreedingCoeff=0.2880;MQ=46.83;MQ0=27;MQRankSum=-3.402;QD=1.63;ReadPosRankSum=-0.587;VQSLOD=1.8947;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:21:13.30:0,13,246	./.	./.	./.	./.	./.	0/0:24,0:22:0.47:0,0,2	0/0:18,0:17:4.96:0,5,23	0/0:16,0:15:12.11:0,12,75	0/0:25,0:25:30.06:0,30,606	0/0:10,0:10:6.01:0,6,93	1/1:19,0:19:15.67:133,16,0	0/0:14,0:14:0.26:0,0,40	./.	0/0:20,0:20:21.05:0,21,327	0/1:15,0:13:32.15:32,0,42	0/0:18,0:18:11.79:0,12,99	0/0:24,0:20:23.17:0,23,301	0/0:12,0:11:11.07:0,11,207	0/0:6,0:6:6.02:0,6,124	0/0:40,0:37:10.85:0,11,195	0/0:17,0:15:8.39:0,8,121	0/1:12,0:10:6.01:15,0,6	0/0:31,15:44:2.03:0,2,22	0/0:14,0:14:15.05:0,15,385	0/0:9,0:9:11.93:0,12,165	0/0:16,0:16:21.96:0,22,404	0/0:13,0:13:17.94:0,18,262
chr10	40889519	.	TCATA	T	15615.09	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=16.178;DP=659;FS=0.000;HRun=0;HaplotypeScore=118.9911;InbreedingCoeff=0.9971;MQ=82.81;MQ0=0;MQRankSum=-9.314;QD=52.05;ReadPosRankSum=1.506;VQSLOD=5.5448;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,37:37:75.05:1573,75,0	1/1:0,5:5:15.05:315,15,0	0/0:32,0:31:93.30:0,93,2555	0/0:26,0:25:75.04:0,75,1985	0/0:13,0:13:36.12:0,36,1043	0/0:20,0:20:60.21:0,60,1703	0/0:29,0:29:87.28:0,87,2428	1/1:0,22:22:66.20:1290,66,0	0/0:26,0:26:78.25:0,78,2142	1/1:1,23:24:72.20:1344,72,0	1/1:0,17:17:42.14:879,42,0	0/0:28,0:28:81.28:0,81,2309	0/0:31,0:31:93.32:0,93,2691	0/0:29,0:29:87.30:0,87,2469	1/1:0,31:31:84.29:1760,84,0	0/0:44,0:44:99:0,132,3779	0/0:37,0:37:99:0,111,3182	1/1:0,16:16:45.15:943,45,0	1/1:0,10:10:30.09:592,30,0	1/1:0,10:10:30.02:542,30,0	1/1:0,40:40:91.10:1802,91,0	1/1:0,14:14:24.08:503,24,0	0/0:14,0:14:39.13:0,39,1127	0/0:30,0:30:90.31:0,90,2588	1/1:0,18:18:45.15:942,45,0	1/1:0,21:21:63.22:1308,63,0	1/1:0,25:25:63.22:1321,63,0	1/1:0,10:10:24.08:503,24,0
chr10	40889939	.	TG	T	4700.11	PASS	AB=0.528;AC=15;AF=0.268;AN=56;BaseQRankSum=13.772;DP=587;FS=1.559;HRun=6;HaplotypeScore=59.8938;InbreedingCoeff=0.9149;MQ=80.48;MQ0=0;MQRankSum=-0.029;QD=25.27;ReadPosRankSum=4.360;VQSLOD=4.8906;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:78.25:0,78,1026	0/0:7,0:7:21.07:0,21,276	0/0:23,0:23:53.98:0,54,629	0/0:20,0:20:51.52:0,52,580	1/1:4,23:27:69.17:740,69,0	1/1:1,26:27:72.18:774,72,0	1/1:1,22:23:48.12:516,48,0	0/0:36,0:36:99:0,99,1251	1/1:2,10:12:27.07:290,27,0	0/0:18,0:18:54.18:0,54,710	0/0:19,0:19:51.15:0,51,656	0/0:22,0:22:60.18:0,60,775	1/1:3,18:21:42.10:451,42,0	0/1:3,25:28:9.19:607,0,9	0/0:26,0:26:78.24:0,78,1010	1/1:1,27:28:69.17:742,69,0	1/1:1,19:20:54.13:580,54,0	0/0:5,0:5:15.05:0,15,197	0/0:14,0:14:33.08:0,33,417	0/0:24,0:24:72.22:0,72,921	0/0:31,0:31:87.28:0,87,1144	0/0:18,0:18:54.09:0,54,687	0/0:14,0:14:42.13:0,42,538	0/0:14,0:14:36.11:0,36,460	0/0:27,0:27:78.17:0,78,1003	0/0:23,0:23:66.20:0,66,852	0/0:26,0:26:66.21:0,66,867	0/0:7,0:7:21.07:0,21,276
chr10	40890665	.	AACAGATGTGT	A	12156.38	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=15.069;DP=647;FS=12.044;HRun=0;HaplotypeScore=221.8074;InbreedingCoeff=0.9993;MQ=74.24;MQ0=0;MQRankSum=-16.233;QD=85.61;ReadPosRankSum=3.536;VQSLOD=3.2386;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:99:0,99,4576	0/0:9,0:9:27.09:0,27,1260	0/0:18,0:18:54.18:0,54,2146	0/0:16,0:16:48.16:0,48,2049	1/1:0,18:18:45.15:1500,45,0	0/0:32,0:32:96.33:0,96,4755	0/0:21,0:21:63.22:0,63,3292	0/0:33,0:33:99:0,99,4271	1/1:0,19:19:42.14:1463,42,0	0/0:28,0:28:81.28:0,81,3341	0/0:19,0:19:57.18:0,57,2323	0/0:19,0:19:57.18:0,57,2993	1/1:1,29:30:81.28:2821,81,0	1/1:0,26:26:72.25:2506,72,0	0/0:25,0:25:75.26:0,75,3230	1/1:0,32:32:78.27:2717,78,0	1/1:0,17:17:33.11:1149,33,0	0/0:20,0:20:60.21:0,60,2639	0/0:20,0:20:60.20:0,60,2549	0/0:33,0:33:96.33:0,96,4401	0/0:21,0:21:63.22:0,63,2828	0/0:13,0:13:39.13:0,39,1770	0/0:18,0:18:51.16:0,51,2633	0/0:17,0:17:51.18:0,51,2633	0/0:30,0:30:90.31:0,90,4153	0/0:30,0:30:90.31:0,90,4124	0/0:42,0:42:99:0,126,5799	0/0:8,0:8:24.08:0,24,1061
chr10	40891039	.	A	AGTT	7207.32	PASS	AB=1.000;AC=45;AF=0.804;AN=56;BaseQRankSum=5.976;DP=535;FS=8.943;HRun=0;HaplotypeScore=107.8652;InbreedingCoeff=0.7425;MQ=63.74;MQ0=2;MQRankSum=-6.327;QD=15.74;ReadPosRankSum=-2.339;VQSLOD=3.1242;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,0:23:14.51:232,15,0	0/1:8,0:8:29.81:30,0,69	0/0:21,0:18:20.51:0,21,195	0/0:14,0:10:0.09:0,0,56	1/1:24,0:24:32.39:235,32,0	1/1:7,0:26:33.10:411,33,0	1/1:21,0:21:41.71:361,42,0	1/1:31,0:31:62.70:635,63,0	1/1:6,0:7:20.86:172,21,0	1/1:13,18:32:59.67:797,60,0	1/1:10,14:24:32.59:359,33,0	0/0:13,0:13:24:0,24,235	1/1:8,0:8:6.02:78,6,0	1/1:11,0:11:20.84:156,21,0	1/1:3,16:19:24.08:471,24,0	1/1:14,0:14:6.02:79,6,0	1/1:9,0:9:6.02:77,6,0	1/1:20,4:24:43.24:458,43,0	1/1:16,2:18:32.64:295,33,0	1/1:13,5:31:29.92:443,30,0	1/1:10,11:21:8.88:95,9,0	1/1:9,0:24:23.57:202,24,0	0/0:13,0:13:29.89:0,30,307	0/0:16,0:16:26.89:0,27,260	1/1:8,8:15:15.05:293,15,0	1/1:5,17:22:44.88:586,45,0	1/1:9,22:32:27.09:514,27,0	1/1:12,1:13:23.84:228,24,0
chr10	40891058	.	G	GTTGTTGTTATTA	7288.19	PASS	AB=0.970;AC=26;AF=0.464;AN=56;BaseQRankSum=-6.200;DP=481;FS=10.429;HRun=0;HaplotypeScore=168.8813;InbreedingCoeff=-0.1699;MQ=51.39;MQ0=3;MQRankSum=-1.515;QD=19.59;ReadPosRankSum=-2.338;VQSLOD=2.7741;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:20,0:20:99:354,0,110	0/1:9,0:10:66.90:67,0,349	0/0:11,0:8:18.04:0,18,281	0/0:14,0:9:4.98:0,5,100	1/1:1,18:24:42.01:854,42,0	0/1:25,0:25:99:526,0,265	0/1:19,0:19:99:328,0,233	0/1:30,0:30:99:733,0,145	1/1:8,0:8:21.06:469,21,0	0/1:25,0:25:99:395,0,199	0/1:20,0:20:99:272,0,221	0/0:9,0:9:24.53:0,25,477	0/1:1,0:13:27.88:162,0,28	1/1:10,0:10:30.08:435,30,0	0/0:18,0:19:24.39:0,24,142	1/1:1,11:16:6.02:370,6,0	1/1:2,8:14:9.03:555,9,0	0/1:19,0:19:80.98:363,0,81	0/1:17,0:17:99:233,0,148	0/1:23,0:23:99:221,0,104	0/1:16,0:16:3.19:3,0,48	0/1:19,0:19:99:303,0,106	0/0:14,0:14:42.12:0,42,870	0/0:15,0:15:39.13:0,39,799	0/1:13,0:12:99:204,0,122	0/1:21,0:21:99:212,0,217	0/0:26,0:26:27.13:0,27,151	0/1:9,0:10:52.19:232,0,52
chr10	40892509	.	T	TA	16314.11	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=2.509;DP=768;FS=4.419;HRun=1;HaplotypeScore=152.8006;InbreedingCoeff=0.9970;MQ=81.92;MQ0=0;MQRankSum=-8.464;QD=38.03;ReadPosRankSum=-2.282;VQSLOD=3.8097;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,32:40:99:1388,99,0	1/1:1,15:16:45.15:674,45,0	0/0:28,0:28:78.23:0,78,977	0/0:23,0:24:39.38:0,39,619	0/0:31,0:31:87.25:0,87,1100	1/1:0,28:28:81.27:1214,81,0	1/1:1,25:26:72.24:1079,72,0	1/1:8,28:33:96.22:1351,96,0	0/0:37,0:37:99:0,105,1363	1/1:3,33:36:96.27:1394,96,0	1/1:1,13:14:36.12:538,36,0	0/0:42,0:42:99:0,123,1596	0/0:27,0:27:75.23:0,75,958	0/0:30,0:30:81.24:0,81,1033	1/1:3,42:45:99:1795,123,0	0/0:29,0:29:87.28:0,87,1129	0/0:38,0:38:99:0,114,1464	1/1:0,7:7:21.05:293,21,0	1/1:0,13:13:39.13:584,39,0	1/1:3,24:27:66.22:988,66,0	1/1:0,20:20:27.09:404,27,0	1/1:3,18:21:57.15:828,57,0	0/0:22,0:22:66.21:0,66,857	0/0:31,0:31:93.30:0,93,1207	1/1:5,25:30:66.18:962,66,0	1/1:2,22:24:69.23:1032,69,0	1/1:2,36:39:99:1565,111,0	1/1:2,5:7:15.05:225,15,0
chr10	40892537	.	GTGTAGTCC	G	22490.31	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=19.641;DP=714;FS=6.388;HRun=0;HaplotypeScore=235.2500;InbreedingCoeff=0.9922;MQ=66.84;MQ0=1;MQRankSum=-19.845;QD=70.06;ReadPosRankSum=1.211;VQSLOD=4.1853;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,29:36:93.32:2604,93,0	1/1:1,9:10:27.09:771,27,0	0/0:30,0:27:66.20:0,66,2482	0/0:28,0:24:57.18:0,57,2197	0/0:26,0:26:75.26:0,75,2980	0/0:28,0:28:78.27:0,78,3403	0/0:28,0:28:84.29:0,84,3613	1/1:5,23:23:66.19:1638,66,0	0/0:28,0:28:78.24:0,78,3022	1/1:4,23:27:72.22:1923,72,0	1/1:0,9:9:27.09:765,27,0	0/0:43,0:43:99:0,123,4955	0/0:21,0:21:60.19:0,60,2407	0/0:35,0:35:99:0,99,4101	1/1:4,39:43:99:3243,117,0	0/0:32,0:32:93.32:0,93,4025	0/0:38,0:38:99:0,108,4651	1/1:1,5:6:15.05:409,15,0	1/1:8,14:21:45.10:1085,45,0	1/1:2,22:24:66.23:1888,66,0	1/1:6,6:12:18.02:425,18,0	1/1:2,18:20:54.17:1442,54,0	0/0:24,0:24:66.23:0,66,2881	0/0:32,0:32:90.31:0,90,3862	1/1:4,20:24:63.17:1712,63,0	1/1:1,24:25:75.21:2026,75,0	1/1:6,25:31:81.27:2217,81,0	1/1:0,4:4:12.04:344,12,0
chr10	40893048	.	GGT	G	14397.19	PASS	AB=0.528;AC=33;AF=0.589;AN=56;BaseQRankSum=3.706;DP=679;FS=9.326;HRun=0;HaplotypeScore=95.8255;InbreedingCoeff=0.9307;MQ=85.36;MQ0=0;MQRankSum=-5.410;QD=36.63;ReadPosRankSum=0.353;VQSLOD=6.7438;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,50:55:99:1977,138,0	1/1:1,6:7:15.05:215,15,0	0/0:18,0:18:42.14:0,42,764	0/0:30,0:30:68.65:0,69,1301	0/0:23,0:23:66.23:0,66,1209	1/1:1,16:17:45.15:645,45,0	1/1:1,28:29:78.26:1117,78,0	1/1:1,21:22:63.18:867,63,0	0/0:24,0:24:72.25:0,72,1301	1/1:4,23:27:72.21:1003,72,0	1/1:3,14:17:39.13:559,39,0	0/0:19,0:19:48.14:0,48,819	0/0:23,0:23:69.24:0,69,1238	0/0:22,0:22:60.21:0,60,1098	1/1:4,29:33:78.26:1109,78,0	0/0:28,0:28:84.29:0,84,1530	0/0:51,0:51:99:0,138,2510	1/1:1,23:24:60.20:860,60,0	1/1:1,10:11:27.09:387,27,0	1/1:2,18:19:57.19:816,57,0	1/1:1,43:44:99:1702,120,0	0/1:2,17:19:9.79:557,0,10	0/0:18,0:18:51.17:0,51,932	0/0:30,0:30:87.30:0,87,1588	1/1:1,13:14:33.11:463,33,0	1/1:2,15:17:48.15:662,48,0	1/1:0,24:24:69.23:987,69,0	1/1:0,13:12:33.11:473,33,0
chr10	40893049	.	GT	G	1460.56	PASS	AB=0.993;AC=29;AF=0.518;AN=56;BaseQRankSum=19.065;DP=668;FS=8.369;HRun=1;HaplotypeScore=125.5810;InbreedingCoeff=0.6674;MQ=84.98;MQ0=0;MQRankSum=-5.229;QD=3.78;ReadPosRankSum=2.313;VQSLOD=0.1292;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:52,0:52:26.77:194,27,0	1/1:7,0:7:10.19:29,10,0	0/0:17,0:17:51.17:0,51,774	0/0:30,0:30:67.79:0,68,1224	0/0:23,0:23:66.23:0,66,1054	1/1:16,0:16:30.56:87,31,0	1/1:28,0:28:52.74:150,53,0	0/1:22,0:22:1.46:87,0,1	0/0:24,0:24:72.25:0,72,1150	0/1:26,1:27:25.89:87,0,26	1/1:16,0:16:26.48:76,26,0	0/0:19,0:19:51.17:0,51,802	0/0:23,0:23:69.23:0,69,1091	0/0:22,0:22:66.18:0,66,1014	0/1:33,0:33:13.05:85,0,13	0/0:28,0:28:84.29:0,84,1342	0/0:48,0:48:99:0,144,2236	1/1:24,0:24:40.74:116,41,0	0/1:11,0:11:27.80:28,0,33	1/1:18,2:19:39.88:121,40,0	1/1:44,0:44:63.59:229,64,0	0/1:19,0:19:38.03:47,0,38	0/0:17,0:17:51.17:0,51,809	0/0:31,0:31:90.26:0,90,1404	1/1:13,0:13:20.37:58,20,0	1/1:16,1:17:21.17:85,21,0	1/1:24,0:24:46.63:133,47,0	1/1:13,0:12:22.41:64,22,0
chr10	40893237	.	TCGG	T	1557.99	PASS	AB=0.974;AC=31;AF=0.554;AN=56;BaseQRankSum=7.782;DP=312;FS=5.381;HRun=0;HaplotypeScore=74.3986;InbreedingCoeff=0.7347;MQ=79.68;MQ0=0;MQRankSum=-8.157;QD=8.24;ReadPosRankSum=8.798;VQSLOD=1.0984;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:11,4:15:2.95:35,3,0	0/1:1,0:1:0:0,0,0	0/0:19,0:14:17.91:0,18,250	0/0:17,0:16:30.31:0,30,284	0/0:6,0:6:8.96:0,9,72	1/1:3,0:13:29.56:190,30,0	1/1:3,0:16:38.43:247,38,0	1/1:14,2:16:5.95:54,6,0	0/0:9,0:9:17.96:0,18,179	0/1:11,1:12:0.03:0,0,0	1/1:10,3:13:9.01:105,9,0	0/0:8,0:8:14.99:0,15,156	0/0:10,0:10:23.71:0,24,256	0/0:7,0:7:8.98:0,9,119	1/1:4,7:11:18.05:209,18,0	0/0:6,0:6:14.98:0,15,153	0/0:18,0:18:44.84:0,45,400	0/1:7,0:7:0.05:0,0,0	1/1:5,0:7:2.93:19,3,0	1/1:4,1:5:3.01:35,3,0	1/1:20,4:24:2.87:35,3,0	1/1:4,6:11:17.93:190,18,0	0/0:5,0:5:8.93:0,9,65	0/0:18,0:18:38.77:0,39,329	1/1:4,2:6:2.99:35,3,0	1/1:6,4:10:6:70,6,0	1/1:3,11:14:30.09:349,30,0	1/1:3,5:8:15.04:175,15,0
chr10	40893345	.	AT	A	4487.37	PASS	AB=0.800;AC=29;AF=0.518;AN=56;BaseQRankSum=8.811;DP=438;FS=41.477;HRun=9;HaplotypeScore=97.0203;InbreedingCoeff=0.8838;MQ=56.55;MQ0=13;MQRankSum=-6.392;QD=18.24;ReadPosRankSum=3.332;VQSLOD=2.7345;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:12,16:27:53.60:444,54,0	1/1:0,7:7:21:186,21,0	0/0:24,0:5:9.65:0,10,83	0/0:16,0:8:15.04:0,15,166	0/0:15,0:12:30.52:0,31,329	0/0:16,0:16:41.15:0,41,447	0/0:7,0:6:14.76:0,15,133	1/1:6,23:28:47.14:600,47,0	0/0:9,0:9:20.50:0,20,201	1/1:6,12:19:47.85:409,48,0	1/1:3,17:19:53.29:447,53,0	0/0:15,0:15:16.40:0,16,176	0/0:13,0:11:24.54:0,25,277	0/0:16,0:16:29.06:0,29,301	1/1:12,4:16:44.88:377,45,0	0/0:17,0:17:29.99:0,30,316	0/0:17,0:16:44.31:0,44,467	1/1:2,7:9:9:82,9,0	1/1:10,2:12:24.01:219,24,0	1/1:8,8:17:36.89:319,37,0	1/1:4,2:6:3:27,3,0	1/1:1,7:8:20.96:182,21,0	0/0:12,0:12:27.36:0,27,275	0/0:15,0:15:30.09:0,30,343	1/1:13,8:21:38.78:313,39,0	1/1:11,9:20:52.10:461,52,0	1/1:8,10:18:35.78:280,36,0	0/1:12,4:16:13.60:143,0,14
chr10	40893346	.	T	TTTTTTTTC	11160.41	PASS	AB=1.000;AC=30;AF=0.536;AN=56;BaseQRankSum=6.016;DP=472;FS=30.690;HRun=0;HaplotypeScore=152.1069;InbreedingCoeff=0.7983;MQ=54.47;MQ0=15;MQRankSum=-7.799;QD=38.62;ReadPosRankSum=2.107;VQSLOD=2.7033;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:23,6:28:54.49:1237,54,0	1/1:8,0:8:19.85:196,20,0	0/0:24,0:5:9.65:0,10,114	0/0:16,0:8:14.70:0,15,236	0/0:15,0:12:30.53:0,31,506	0/1:17,0:16:44.20:44,0,601	0/0:7,0:6:15.05:0,15,211	1/1:32,0:29:45.88:968,46,0	0/0:10,0:10:20.42:0,20,258	1/1:17,3:20:47.79:951,48,0	1/1:23,3:24:60.62:1121,61,0	0/0:16,0:16:4.87:0,5,214	0/0:14,0:12:24.50:0,25,396	0/0:16,0:16:29.04:0,29,457	1/1:14,4:18:50.46:1059,50,0	0/0:18,0:18:29.92:0,30,517	0/0:18,0:18:37.16:0,37,819	1/1:10,0:10:14.94:179,15,0	1/1:16,1:17:42.05:582,42,0	1/1:15,4:17:39.99:900,40,0	1/1:6,0:6:3.01:45,3,0	1/1:7,1:8:21.05:367,21,0	0/0:12,0:12:27.07:0,27,500	0/0:17,0:17:30.10:0,30,573	1/1:18,5:22:44.50:1168,44,0	1/1:17,4:21:49.01:1051,49,0	1/1:13,7:17:36.03:989,36,0	0/1:15,0:14:49.27:303,0,49
chr10	40893364	.	T	TGG	821.13	PASS	AB=0.774;AC=13;AF=0.232;AN=56;BaseQRankSum=11.846;DP=463;FS=12.461;HRun=0;HaplotypeScore=117.4300;InbreedingCoeff=-0.3255;MQ=42.52;MQ0=26;MQRankSum=-5.969;QD=3.63;ReadPosRankSum=7.959;VQSLOD=0.6531;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:22,9:29:99:136,0,453	0/1:9,3:12:23.03:23,0,253	0/0:18,0:1:3.01:0,3,46	0/0:13,0:6:0.59:0,1,105	0/0:18,0:15:39.13:0,39,562	0/0:17,0:15:36.09:0,36,456	0/0:10,0:8:23.92:0,24,267	0/0:28,2:26:68.27:0,68,783	0/0:10,0:10:27.01:0,27,324	0/1:13,4:17:46.88:47,0,320	0/1:18,9:24:75.93:76,0,278	0/0:15,0:13:33.11:0,33,455	0/0:11,0:9:27.09:0,27,367	0/0:16,0:15:42.14:0,42,609	0/1:11,6:16:99:102,0,226	0/0:16,0:15:41.88:0,42,602	0/0:21,0:20:52.78:0,53,783	0/1:9,3:11:52.90:53,0,173	0/1:10,3:13:66.65:67,0,198	0/1:13,7:18:68.34:68,0,272	0/1:3,1:2:16.41:16,0,31	0/1:7,1:7:13.69:14,0,155	0/0:15,0:15:45.14:0,45,630	0/0:19,0:19:36.12:0,36,528	0/1:13,13:25:99:209,0,294	0/1:15,5:20:59.17:59,0,420	0/1:10,8:15:99:102,0,245	0/0:7,1:7:18.06:0,18,258
chr10	40893373	.	T	TTCC	6156.56	PASS	AB=0.813;AC=26;AF=0.481;AN=54;BaseQRankSum=5.688;DP=395;FS=50.188;HRun=0;HaplotypeScore=142.0732;InbreedingCoeff=0.2009;MQ=38.99;MQ0=23;MQRankSum=-2.784;QD=21.45;ReadPosRankSum=5.039;VQSLOD=2.7628;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:16,9:24:35.30:589,0,35	0/1:10,3:13:25.15:230,0,25	./.	0/0:4,0:2:2.50:0,2,9	0/0:18,0:14:32.56:0,33,402	1/1:7,0:5:5.53:46,6,0	1/1:10,0:8:17.06:179,17,0	0/1:23,2:21:19.95:370,0,20	0/1:14,0:14:25.26:25,0,195	0/1:12,4:17:5.94:458,0,6	0/1:12,9:21:46.09:474,0,46	0/0:12,0:10:11.44:0,11,153	0/1:10,0:8:19.86:20,0,147	0/0:10,0:9:20.54:0,21,219	0/1:12,6:17:1.54:493,0,2	0/0:12,0:11:23.64:0,24,300	0/0:13,0:12:18.08:0,18,331	1/1:8,3:10:21.07:308,21,0	0/1:5,1:12:1.36:267,0,1	1/1:7,7:20:1.89:448,2,0	1/1:4,1:3:3.01:50,3,0	0/1:5,1:5:15.07:89,0,15	0/0:17,0:17:34.76:0,35,442	0/0:14,0:14:8.09:0,8,114	1/1:13,12:25:58.13:886,58,0	1/1:6,5:19:19.82:573,20,0	1/1:13,8:19:32.44:653,32,0	0/0:2,1:2:3.01:0,3,36
chr10	40893923	.	C	CTCT	152.47	PASS	AC=6;AF=0.143;AN=42;BaseQRankSum=-0.644;DP=68;FS=34.301;HRun=0;HaplotypeScore=16.3801;InbreedingCoeff=0.4019;MQ=80.02;MQ0=0;MQRankSum=-2.910;QD=16.94;ReadPosRankSum=1.648;VQSLOD=1.0015;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:8:24.08:0,24,385	./.	0/0:5,0:5:14.99:0,15,179	0/0:1,0:1:3.01:0,3,47	0/0:6,0:6:1.61:0,2,3	0/0:2,0:2:6.02:0,6,98	0/0:2,0:2:6.02:0,6,101	0/0:9,0:9:27.08:0,27,415	1/1:0,2:2:6.02:97,6,0	0/0:3,0:3:9.02:0,9,132	./.	0/0:1,0:1:3.01:0,3,50	1/1:0,4:4:6.02:112,6,0	1/1:3,0:3:4.91:50,5,0	./.	./.	0/0:6,0:5:4.70:0,5,17	./.	0/0:2,0:2:6:0,6,75	0/0:1,0:1:3.01:0,3,51	./.	0/0:2,0:2:6.02:0,6,102	./.	0/0:2,0:2:3.01:0,3,49	0/0:1,0:1:3:0,3,27	0/0:1,0:1:0.47:0,0,1	0/0:1,0:1:2.99:0,3,24	0/0:3,0:2:6:0,6,73
chr10	40894532	.	CT	C	4857.45	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=10.651;DP=768;FS=8.010;HRun=8;HaplotypeScore=86.7113;InbreedingCoeff=0.9960;MQ=76.38;MQ0=0;MQRankSum=-3.845;QD=26.26;ReadPosRankSum=3.590;VQSLOD=5.1965;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:84.25:0,84,1003	0/0:11,0:11:33.10:0,33,399	0/0:25,0:25:51.18:0,51,656	0/0:15,0:15:14.17:0,14,295	1/1:1,31:32:90.09:859,90,0	0/0:19,0:19:48.15:0,48,580	0/0:20,0:20:54.17:0,54,652	0/0:49,0:49:99:0,123,1468	1/1:2,34:36:93.15:898,93,0	0/0:35,0:35:93.28:0,93,1115	0/0:25,1:26:49.26:0,49,876	0/0:22,0:22:60.18:0,60,718	1/1:0,20:20:60.10:579,60,0	1/1:2,28:30:81.13:782,81,0	0/0:38,0:38:99:0,111,1312	1/1:2,40:42:99:1101,114,0	1/1:1,24:25:66.11:637,66,0	0/0:12,0:12:33.10:0,33,399	0/0:19,0:19:51.16:0,51,616	0/0:35,0:35:99:0,105,1247	0/0:22,0:22:48.15:0,48,580	0/0:35,0:35:99:0,102,1222	0/0:29,0:29:78.23:0,78,931	0/0:15,0:15:45.14:0,45,544	0/0:30,0:30:84.25:0,84,1004	0/0:31,0:31:90.28:0,90,1087	0/0:39,0:38:99:0,102,1232	0/0:26,0:26:47.84:0,48,579
chr10	40898058	.	A	ATTCATTCTCGCTCTCT	2687.97	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=2.149;DP=613;FS=25.272;HRun=0;HaplotypeScore=226.5740;InbreedingCoeff=0.3964;MQ=72.47;MQ0=6;MQRankSum=-2.778;QD=10.07;ReadPosRankSum=-6.882;VQSLOD=-0.5767;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:48.16:0,48,1369	0/0:8,0:7:15:0,15,418	0/0:36,0:23:50.89:0,51,1071	0/0:35,0:19:45.72:0,46,1129	1/1:28,0:28:33.11:660,33,0	0/0:33,0:32:19.90:0,20,1614	0/0:25,0:25:61.43:0,61,1670	0/0:30,0:29:86.47:0,86,2359	1/1:19,0:19:20.42:413,20,0	0/0:24,0:24:29.32:0,29,1520	0/0:21,0:20:33.09:0,33,981	0/0:31,0:31:84.26:0,84,2545	1/1:17,0:17:12.04:250,12,0	1/1:20,0:20:15.05:317,15,0	0/0:18,0:18:33.11:0,33,885	1/1:0,21:25:3.01:236,3,0	1/1:18,0:18:16.61:352,17,0	0/1:15,0:15:81.57:82,0,614	0/1:25,0:24:99:131,0,1365	0/1:20,0:20:18.62:19,0,1423	0/1:12,0:12:86.17:86,0,578	0/0:16,0:15:39.13:0,39,1209	0/0:11,0:11:27.09:0,27,776	0/0:18,0:18:33.11:0,33,877	0/1:25,0:25:99:135,0,1295	0/1:25,0:25:99:119,0,1392	0/0:18,0:18:19.99:0,20,1091	0/1:18,0:16:80.32:80,0,922
chr10	40898059	.	T	TTCTC	3194.96	PASS	AB=1.000;AC=45;AF=0.865;AN=52;BaseQRankSum=-1.923;DP=696;FS=10.856;HRun=0;HaplotypeScore=145.6638;InbreedingCoeff=0.2262;MQ=68.34;MQ0=8;MQRankSum=-0.456;QD=4.98;ReadPosRankSum=0.011;VQSLOD=2.1342;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:24:0:0,0,0	1/1:8,0:7:5.45:15,5,0	./.	0/1:35,0:19:0:0,0,0	0/1:33,0:33:0.29:0,0,0	1/1:35,0:33:17.04:235,17,0	1/1:24,5:31:5.69:82,6,0	1/1:43,0:42:14.22:95,14,0	1/1:23,0:23:9.02:107,9,0	1/1:27,0:27:17.34:223,17,0	1/1:22,0:21:6.01:68,6,0	0/1:31,0:31:16.94:17,0,40	1/1:21,0:21:10.22:157,10,0	1/1:22,0:22:2.65:50,3,0	1/1:12,6:21:6.02:139,6,0	1/1:24,0:24:3.01:31,3,0	0/1:21,0:21:14.10:30,0,14	1/1:15,0:15:20.81:334,21,0	1/1:30,0:29:15.52:240,16,0	1/1:22,0:22:6.02:95,6,0	1/1:14,0:14:9.03:142,9,0	./.	0/1:13,0:13:0.17:0,0,0	0/1:20,0:19:0:0,0,0	1/1:25,0:25:15.05:255,15,0	1/1:30,0:30:30.98:527,31,0	1/1:31,0:31:22.95:275,23,0	1/1:20,0:18:12.04:174,12,0
chr10	40898061	.	C	CAT	849.14	PASS	AB=0.719;AC=9;AF=0.161;AN=56;BaseQRankSum=8.412;DP=726;FS=18.048;HRun=0;HaplotypeScore=135.9824;InbreedingCoeff=0.4861;MQ=65.12;MQ0=12;MQRankSum=-4.236;QD=5.44;ReadPosRankSum=-0.683;VQSLOD=1.9958;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:57.15:0,57,800	0/0:8,0:7:18.04:0,18,248	0/0:32,0:19:39.16:0,39,690	0/0:35,0:19:33.15:0,33,535	1/1:18,24:40:14.07:365,14,0	0/0:35,0:33:77.16:0,77,986	0/0:31,0:30:60.31:0,60,854	0/0:48,0:47:99:0,111,1403	0/1:9,13:24:18.78:193,0,19	0/0:29,0:29:67.58:0,68,861	0/0:21,0:20:36.58:0,37,524	0/0:34,0:33:87.27:0,87,1278	1/1:5,15:21:2.40:131,2,0	0/1:3,15:20:8.92:122,0,9	0/0:21,0:21:32.18:0,32,431	0/1:26,0:26:8.84:22,0,9	1/1:10,13:23:0.31:152,0,0	0/0:15,0:15:39.88:0,40,435	0/0:30,0:29:77.37:0,77,1001	0/0:21,0:21:54.13:0,54,776	0/0:16,0:16:25.78:0,26,316	0/0:22,0:20:45.14:0,45,652	0/0:13,0:13:30.08:0,30,421	0/0:21,0:19:36.04:0,36,505	0/0:27,0:27:66.07:0,66,874	0/0:32,0:31:80.37:0,80,982	0/0:32,0:32:58.13:0,58,752	0/0:22,0:20:45.48:0,45,541
chr10	40898090	.	T	TC	51.66	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.303;DP=531;FS=0.000;HRun=1;HaplotypeScore=85.8912;InbreedingCoeff=0.6746;MQ=48.26;MQ0=24;MQRankSum=1.509;QD=7.38;ReadPosRankSum=-0.363;VQSLOD=0.3394;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:21:54.17:0,54,688	1/1:2,5:6:9.03:135,9,0	0/0:21,0:9:21.02:0,21,226	0/0:26,0:10:6.22:0,6,143	0/0:37,0:35:23.75:0,24,305	0/0:23,0:22:41.49:0,41,404	0/0:19,0:18:26.92:0,27,287	0/0:26,0:25:53.28:0,53,630	0/0:22,0:22:18.03:0,18,205	0/0:24,0:24:69.53:0,70,781	0/0:11,0:10:13.83:0,14,142	0/0:27,0:26:69.21:0,69,865	0/0:15,0:15:18.05:0,18,219	0/0:12,0:11:8.98:0,9,95	0/0:15,0:14:12.14:0,12,121	0/0:19,0:19:18.05:0,18,218	0/0:25,0:25:33.06:0,33,359	0/0:14,0:13:37.39:0,37,355	0/0:24,0:23:65.79:0,66,753	0/0:9,0:9:14.98:0,15,157	0/0:13,0:13:15.82:0,16,143	0/0:18,0:17:42.13:0,42,535	0/0:11,0:11:18.05:0,18,221	0/0:19,0:16:36.10:0,36,445	0/0:14,0:14:8.10:0,8,295	0/0:23,0:21:56.01:0,56,561	0/0:26,0:25:60.65:0,61,745	0/0:7,0:7:17:0,17,167
chr10	40898234	.	TTTTC	T	7306.21	PASS	AB=1.000;AC=26;AF=0.464;AN=56;BaseQRankSum=8.194;DP=554;FS=6.784;HRun=0;HaplotypeScore=154.6557;InbreedingCoeff=0.8332;MQ=60.22;MQ0=2;MQRankSum=-10.614;QD=27.68;ReadPosRankSum=1.516;VQSLOD=4.5887;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:36:1.48:0,1,256	0/1:10,0:10:0.04:0,0,130	0/0:12,0:7:3.62:0,4,115	0/0:26,0:20:27.03:0,27,443	0/0:26,0:25:60.76:0,61,721	0/0:29,0:29:72.24:0,72,1671	0/0:24,0:23:51.16:0,51,1101	1/1:6,23:29:66.21:1033,66,0	0/0:13,0:13:25.78:0,26,231	1/1:7,19:26:57.11:862,57,0	1/1:8,6:14:35.99:507,36,0	0/0:21,0:21:51.14:0,51,957	0/0:11,0:10:20.11:0,20,191	0/0:7,0:7:12.14:0,12,88	1/1:1,17:18:33.04:496,33,0	0/0:19,0:19:30.59:0,31,229	0/0:21,0:21:30.01:0,30,286	1/1:10,4:14:32.14:330,32,0	1/1:12,3:15:18.05:264,18,0	1/1:9,11:20:51.12:768,51,0	1/1:6,3:9:18.03:261,18,0	0/1:31,0:31:27.73:28,0,87	0/0:25,0:25:66.23:0,66,1543	0/0:18,0:18:54.17:0,54,1109	1/1:2,16:18:36.12:581,36,0	1/1:9,21:30:60.19:966,60,0	1/1:6,11:17:48.11:730,48,0	1/1:6,7:13:30.09:482,30,0
chr10	40898253	.	TC	T	4064.12	PASS	AB=0.960;AC=27;AF=0.482;AN=56;BaseQRankSum=10.454;DP=563;FS=4.663;HRun=1;HaplotypeScore=147.8649;InbreedingCoeff=0.0991;MQ=51.25;MQ0=16;MQRankSum=-10.337;QD=10.58;ReadPosRankSum=4.638;VQSLOD=2.1163;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:32:2.25:0,2,56	0/0:14,0:14:0.43:0,0,32	0/0:26,0:4:7.37:0,7,69	0/1:26,1:13:4.28:4,0,182	1/1:10,13:22:60.20:813,60,0	0/0:28,0:28:84.22:0,84,1101	0/0:17,0:17:51.15:0,51,690	0/1:35,1:35:31:139,0,31	0/1:2,12:14:2.55:356,0,3	0/1:22,0:21:2.10:177,0,2	0/1:19,0:19:55.29:94,0,55	0/0:14,0:14:34.11:0,34,457	1/1:1,13:13:27.02:338,27,0	1/1:2,7:9:27.02:318,27,0	0/1:21,0:21:50.77:86,0,51	1/1:1,10:20:33.03:390,33,0	1/1:0,22:22:39.13:525,39,0	0/1:15,0:15:73.73:75,0,74	0/1:12,0:11:34.08:48,0,34	0/1:21,0:20:63.74:117,0,64	0/1:7,0:7:7.19:37,0,7	0/1:30,0:30:3.42:3,0,66	0/0:24,0:24:60.23:0,60,865	0/0:22,1:22:47.87:0,48,659	0/1:19,0:18:14.35:109,0,14	0/1:26,0:26:22.29:153,0,22	1/1:18,0:17:8.45:150,8,0	1/1:9,0:9:25.29:130,25,0
chr10	40898254	.	CTTTCTTTT	C	11301.61	PASS	AB=1.000;AC=37;AF=0.661;AN=56;BaseQRankSum=9.086;DP=577;FS=6.920;HRun=0;HaplotypeScore=189.2420;InbreedingCoeff=0.5789;MQ=50.20;MQ0=16;MQRankSum=-10.052;QD=27.23;ReadPosRankSum=-0.006;VQSLOD=3.9392;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,0:32:29.52:613,30,0	1/1:0,13:13:11.54:328,12,0	0/0:27,0:4:4.71:0,5,96	0/0:25,0:12:19.16:0,19,158	0/1:23,0:22:77.67:78,0,143	0/0:28,0:28:81.20:0,81,2174	0/0:17,0:17:48.12:0,48,1233	1/1:36,0:35:67.50:767,67,0	0/1:14,0:14:46.80:117,0,47	1/1:14,9:22:62.22:1067,62,0	1/1:16,4:20:48.38:704,48,0	0/0:15,0:15:39.04:0,39,905	0/1:14,0:13:9.52:101,0,10	1/1:9,0:9:15.10:117,15,0	1/1:15,7:22:49.11:863,49,0	0/1:21,0:21:10.06:81,0,10	0/1:23,0:23:55.55:175,0,56	1/1:12,2:15:29.21:350,29,0	1/1:9,3:11:12.10:420,12,0	1/1:13,6:20:57.10:930,57,0	1/1:8,1:9:18.18:181,18,0	1/1:0,0:29:47.19:923,47,0	0/0:25,0:25:74:0,74,1613	0/0:24,0:23:54.12:0,54,1571	1/1:14,6:19:50.08:745,50,0	1/1:20,8:28:76.30:1214,76,0	1/1:11,8:19:44.67:913,45,0	1/1:2,7:9:27.07:616,27,0
chr10	40898257	.	TC	T	5241.67	PASS	AB=1.000;AC=41;AF=0.732;AN=56;BaseQRankSum=12.091;DP=581;FS=3.006;HRun=1;HaplotypeScore=148.0057;InbreedingCoeff=0.6976;MQ=49.75;MQ0=17;MQRankSum=-11.155;QD=11.70;ReadPosRankSum=-0.974;VQSLOD=3.0794;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:31,1:31:38.85:319,39,0	1/1:13,0:13:11.59:103,12,0	0/0:27,0:3:4.77:0,5,34	0/1:27,0:11:8.64:9,0,91	0/1:27,0:26:13.04:112,0,13	0/0:27,0:27:81.08:0,81,771	0/0:17,0:17:50.97:0,51,470	1/1:32,1:32:66.77:422,67,0	0/1:12,0:12:0.80:44,0,1	1/1:23,0:22:55.50:416,55,0	1/1:19,0:19:38.96:239,39,0	0/0:14,0:14:1.20:0,1,207	1/1:15,0:14:24.04:111,24,0	1/1:10,0:10:21.72:112,22,0	1/1:23,1:23:46.12:343,46,0	1/1:21,0:21:29.81:136,30,0	1/1:23,0:23:22.61:155,23,0	1/1:11,4:15:17.55:166,18,0	1/1:14,0:13:38.08:259,38,0	1/1:19,1:19:46.73:298,47,0	1/1:8,0:8:16.17:107,16,0	1/1:29,0:29:59.64:475,60,0	0/0:25,0:25:41.50:0,42,504	0/0:23,0:22:48:0,48,416	1/1:23,0:22:50.20:339,50,0	1/1:28,0:28:74.53:529,75,0	1/1:21,1:21:38.48:299,38,0	1/1:10,0:10:29.96:248,30,0
chr10	40898258	.	CTTTT	C	4549.06	PASS	AB=0.956;AC=37;AF=0.661;AN=56;BaseQRankSum=9.871;DP=590;FS=15.920;HRun=16;HaplotypeScore=176.4248;InbreedingCoeff=0.4993;MQ=49.68;MQ0=17;MQRankSum=-8.793;QD=10.70;ReadPosRankSum=2.209;VQSLOD=1.0278;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:32,0:31:26.18:219,26,0	1/1:13,0:13:12.02:119,12,0	0/0:27,0:3:2.65:0,3,54	0/0:26,0:11:2.77:0,3,42	0/1:20,7:27:21.37:303,0,21	0/0:28,0:28:47.70:0,48,1000	0/0:18,0:18:17.40:0,17,510	0/1:32,0:31:28.15:41,0,28	1/1:9,3:12:12.85:234,13,0	1/1:23,0:22:32.68:381,33,0	1/1:20,0:20:16.37:172,16,0	0/0:14,0:14:33.02:0,33,507	1/1:11,3:13:11.17:177,11,0	1/1:8,1:10:19.03:189,19,0	1/1:24,0:23:6.02:250,6,0	1/1:14,7:21:15.44:267,15,0	1/1:16,4:21:16.84:305,17,0	0/1:15,0:15:75.19:75,0,76	0/1:14,0:13:41.86:117,0,42	1/1:22,0:21:13.52:216,14,0	0/1:9,0:9:13.66:23,0,14	1/1:29,0:29:24.63:314,25,0	0/0:21,0:26:30.58:0,31,795	0/0:21,0:22:48.12:0,48,908	1/1:24,0:23:24.45:268,24,0	1/1:29,0:29:36.48:346,36,0	1/1:23,0:22:15.11:304,15,0	1/1:10,0:10:12.79:228,13,0
chr10	40898262	.	T	TTTTC	3856.90	PASS	AB=0.932;AC=21;AF=0.375;AN=56;BaseQRankSum=-8.564;DP=605;FS=6.904;HRun=0;HaplotypeScore=187.9882;InbreedingCoeff=-0.4387;MQ=49.59;MQ0=17;MQRankSum=1.385;QD=9.01;ReadPosRankSum=-7.384;VQSLOD=-0.4220;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:32:65.88:66,0,66	0/0:14,0:14:11.25:0,11,89	0/0:33,0:4:2.98:0,3,31	0/1:29,0:10:3.23:3,0,23	0/1:26,0:25:99:100,0,216	0/0:29,0:29:56.61:0,57,743	0/0:20,0:20:19.52:0,20,362	0/1:29,2:30:90.29:303,0,90	0/1:13,0:13:49.32:51,0,49	0/1:22,1:22:23.28:211,0,23	0/1:10,9:21:30.98:541,0,31	0/0:12,0:12:26.78:0,27,342	0/1:14,0:13:42:42,0,81	0/1:11,0:11:47.23:99,0,47	0/1:23,1:23:26.26:426,0,26	0/0:22,0:22:2.70:0,3,83	0/1:22,0:22:81.97:168,0,82	1/1:15,0:15:8.45:166,8,0	0/1:16,0:15:37.59:157,0,38	0/1:24,0:23:41.10:470,0,41	0/1:4,5:10:18.88:130,0,19	0/1:29,0:29:29.28:29,0,265	0/0:23,0:23:58.91:0,59,633	0/0:24,0:23:54.10:0,54,804	0/1:22,2:23:6.94:366,0,7	0/1:29,1:30:41.56:414,0,42	0/1:14,9:22:34.67:111,0,35	0/1:9,0:9:4.44:4,0,7
chr10	40898263	.	T	TCT	1059.66	PASS	AB=0.983;AC=18;AF=0.321;AN=56;BaseQRankSum=4.214;DP=599;FS=3.573;HRun=0;HaplotypeScore=173.3844;InbreedingCoeff=-0.3326;MQ=49.58;MQ0=17;MQRankSum=-2.528;QD=3.11;ReadPosRankSum=3.393;VQSLOD=2.7930;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:32:37.06:0,37,210	0/0:14,0:14:10.71:0,11,44	0/0:33,0:4:2.89:0,3,19	0/0:29,0:9:9.30:0,9,73	0/1:19,5:24:99:104,0,196	0/0:29,0:29:55.04:0,55,474	0/0:19,0:19:21.58:0,22,238	0/1:28,0:28:24.15:24,0,115	0/1:13,0:13:33.45:33,0,64	0/1:23,0:22:35.04:86,0,35	0/1:20,0:20:14:141,0,14	0/0:12,0:12:33.48:0,33,363	0/1:14,0:13:24.99:25,0,67	0/1:11,0:11:40.93:65,0,41	0/1:24,0:23:43.14:121,0,43	0/1:22,0:22:18.87:19,0,55	0/1:22,0:22:77.28:95,0,77	0/0:14,0:15:11.05:0,11,65	0/1:16,0:15:79.04:79,0,89	0/1:23,0:23:16.99:105,0,17	0/1:10,0:10:14.76:15,0,47	0/0:29,0:29:53.30:0,53,294	0/0:21,0:21:62.90:0,63,668	0/0:24,0:23:57.02:0,57,716	0/1:25,0:24:33.59:121,0,34	0/1:31,0:31:75.72:136,0,76	0/1:23,0:22:13.55:28,0,14	1/1:9,0:9:9.90:25,10,0
chr10	40899133	.	A	AT	1820.87	PASS	AB=0.845;AC=14;AF=0.250;AN=56;BaseQRankSum=-6.389;DP=502;FS=5.189;HRun=10;HaplotypeScore=50.3211;InbreedingCoeff=0.6420;MQ=71.25;MQ0=3;MQRankSum=2.288;QD=12.14;ReadPosRankSum=0.295;VQSLOD=2.8309;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:80.87:0,81,665	0/0:5,0:5:14.98:0,15,123	0/1:30,0:14:4.97:5,0,103	0/0:23,0:10:13.86:0,14,92	1/1:7,26:33:17.59:706,18,0	0/0:10,0:10:26.97:0,27,222	0/0:10,0:11:23.01:0,23,178	0/0:21,0:22:43.97:0,44,351	1/1:0,11:11:30.08:320,30,0	0/1:22,4:26:53.05:53,0,377	0/0:24,1:25:36.29:0,36,492	0/0:16,0:16:41.93:0,42,343	0/1:2,3:5:9.61:112,0,10	1/1:1,10:11:30.07:318,30,0	0/0:14,0:14:35.95:0,36,296	1/1:3,13:16:36.04:371,36,0	1/1:2,7:10:11.86:110,12,0	0/0:16,0:16:41.94:0,42,345	0/0:26,0:26:37:0,37,464	0/0:22,0:22:62.93:0,63,517	0/0:12,0:12:32.96:0,33,271	0/0:16,0:16:41.94:0,42,345	0/0:14,0:14:32.96:0,33,271	0/1:7,1:8:8.01:8,0,148	0/0:22,0:22:59.89:0,60,487	0/0:28,0:28:74.85:0,75,609	0/0:19,0:19:47.94:0,48,394	0/0:14,0:14:14.97:0,15,123
chr10	40899402	.	GAATA	G	6090.16	PASS	AB=1.000;AC=26;AF=0.464;AN=56;BaseQRankSum=-8.236;DP=632;FS=0.000;HRun=0;HaplotypeScore=117.2065;InbreedingCoeff=-0.0027;MQ=65.95;MQ0=2;MQRankSum=-2.039;QD=13.18;ReadPosRankSum=-6.601;VQSLOD=2.4160;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:14.30:0,14,1184	0/1:9,0:9:19.89:20,0,267	0/0:17,0:12:11.83:0,12,402	0/0:12,0:12:25.29:0,25,348	1/1:0,26:26:68.59:930,69,0	0/0:16,0:16:48.14:0,48,1093	0/0:22,0:22:63.15:0,63,1338	0/1:29,0:29:99:320,0,360	1/1:2,21:23:42.14:795,42,0	0/1:33,0:33:16.67:17,0,1089	0/1:22,0:22:53.90:54,0,571	0/0:25,0:25:72.11:0,72,1544	1/1:0,23:23:14.79:284,15,0	1/1:2,25:25:42.14:794,42,0	0/1:27,0:27:33.31:33,0,742	1/1:0,26:26:45.12:851,45,0	1/1:1,33:32:66.22:1225,66,0	0/1:20,0:20:31.79:32,0,718	0/1:20,0:20:99:215,0,301	0/1:24,0:24:79.19:79,0,600	0/1:13,0:13:85.85:86,0,341	0/1:25,0:25:83.25:83,0,689	0/0:22,0:22:66.18:0,66,1459	0/0:23,0:23:69.13:0,69,1498	0/1:17,0:17:7.83:8,0,539	0/1:21,0:21:99:111,0,493	0/1:32,0:32:91.29:91,0,923	0/1:11,0:11:61.68:62,0,218
chr10	40899538	.	TG	T	1142.50	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.723;DP=608;FS=6.786;HRun=3;HaplotypeScore=64.2655;InbreedingCoeff=0.9969;MQ=72.06;MQ0=2;MQRankSum=-0.628;QD=27.20;ReadPosRankSum=1.247;VQSLOD=2.5276;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:87.28:0,87,1230	0/0:9,0:9:27.09:0,27,389	0/0:32,0:30:72.23:0,72,1000	0/0:34,0:30:87.75:0,88,1214	0/0:18,0:18:51.17:0,51,734	0/0:15,0:15:45.15:0,45,644	0/0:30,0:30:87.29:0,87,1248	0/0:25,0:25:72.23:0,72,1017	1/1:0,18:18:47.68:595,48,0	0/0:15,0:15:39.13:0,39,562	0/0:12,0:12:33.08:0,33,453	0/0:21,0:21:63.20:0,63,886	1/1:1,23:24:54.17:670,54,0	0/0:20,0:20:60.14:0,60,821	0/0:33,0:33:93.31:0,93,1332	0/0:25,0:25:72.23:0,72,1014	0/0:30,0:30:87.29:0,87,1253	0/0:36,0:36:99:0,104,1443	0/0:14,0:14:36.12:0,36,515	0/0:21,0:21:54.18:0,54,773	0/0:38,0:38:99:0,108,1538	0/0:18,0:18:48.11:0,48,651	0/0:14,0:14:36.11:0,36,500	0/0:19,0:19:54.18:0,54,772	0/0:12,0:12:33.11:0,33,475	0/0:14,0:14:42.14:0,42,605	0/0:24,0:24:66.19:0,66,924	0/0:7,0:7:21.04:0,21,265
chr10	40899762	.	A	AAAG	9274.92	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=0.674;DP=785;FS=4.535;HRun=0;HaplotypeScore=121.0737;InbreedingCoeff=0.9998;MQ=67.43;MQ0=6;MQRankSum=-1.883;QD=50.68;ReadPosRankSum=3.839;VQSLOD=7.0967;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,138,2159	0/0:13,0:13:39.13:0,39,633	0/0:36,0:21:35.56:0,36,495	0/0:42,0:27:53.66:0,54,692	1/1:3,26:30:64.15:1619,64,0	0/0:27,0:27:81.26:0,81,1287	0/0:24,0:24:51.49:0,51,882	0/0:24,0:24:63.10:0,63,924	1/1:1,28:29:57.20:1260,57,0	0/0:28,0:28:78.26:0,78,1245	0/0:12,0:12:30.10:0,30,487	0/0:31,0:31:87.29:0,87,1390	1/1:1,36:38:93.13:2004,93,0	1/1:4,25:29:72.25:1586,72,0	0/0:37,0:37:99:0,102,1613	1/1:0,25:26:66.08:1448,66,0	1/1:4,27:31:63.21:1358,63,0	0/0:26,0:26:74.83:0,75,1155	0/0:20,0:20:60.17:0,60,901	0/0:21,0:21:57.18:0,57,903	0/0:34,0:33:87.30:0,87,1412	0/0:25,0:25:72.17:0,72,1071	0/0:34,0:34:99:0,99,1533	0/0:37,0:37:99:0,102,1484	0/0:13,0:13:39.13:0,39,632	0/0:26,0:26:75.24:0,75,1175	0/0:25,0:25:75.23:0,75,1172	0/0:16,0:16:48.12:0,48,720
chr10	40900219	.	T	TTTCCTTCC	14809.78	PASS	AB=1.000;AC=45;AF=0.804;AN=56;BaseQRankSum=6.209;DP=649;FS=30.687;HRun=0;HaplotypeScore=236.2422;InbreedingCoeff=0.8135;MQ=53.52;MQ0=7;MQRankSum=-6.221;QD=26.88;ReadPosRankSum=-1.140;VQSLOD=3.0309;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:31,0:31:45.97:772,46,0	1/1:10,0:9:15.05:364,15,0	0/0:14,0:8:2.96:0,3,19	0/0:25,0:15:8.98:0,9,109	1/1:29,0:27:31.19:452,31,0	1/1:13,20:33:30.10:1186,30,0	1/1:24,2:25:36.03:783,36,0	1/1:30,0:29:52.81:887,53,0	1/1:22,0:21:26.99:497,27,0	1/1:36,0:35:60.07:1104,60,0	1/1:31,0:27:49.17:763,49,0	0/0:15,0:15:18.04:0,18,354	1/1:13,0:13:21.02:322,21,0	1/1:22,0:21:29.96:432,30,0	1/1:28,0:26:42.01:635,42,0	1/1:20,0:20:41.70:689,42,0	1/1:16,0:14:18:332,18,0	0/1:15,0:12:57.67:210,0,58	1/1:35,0:34:36.01:628,36,0	1/1:28,0:28:40.06:633,40,0	1/1:13,0:11:15.01:168,15,0	1/1:23,0:22:45.12:858,45,0	0/0:19,0:18:36.04:0,36,800	0/0:24,0:23:33.02:0,33,612	1/1:19,0:18:31.74:564,32,0	1/1:30,0:30:63.10:1298,63,0	1/1:27,0:25:50.94:997,51,0	1/1:14,0:13:12.04:236,12,0
chr10	40900256	.	T	TTC	5960.36	PASS	AB=0.764;AC=24;AF=0.429;AN=56;BaseQRankSum=7.582;DP=537;FS=88.721;HRun=0;HaplotypeScore=117.5723;InbreedingCoeff=-0.6057;MQ=40.86;MQ0=28;MQRankSum=-8.291;QD=15.44;ReadPosRankSum=-1.103;VQSLOD=0.9575;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:16,10:26:99:435,0,485	0/1:4,1:4:48.70:49,0,135	0/0:44,0:7:18.06:0,18,273	0/0:66,0:13:33.11:0,33,515	1/1:6,7:13:23.76:352,24,0	0/1:19,0:20:85.35:85,0,181	0/1:24,0:25:63.46:63,0,629	0/1:17,5:21:99:255,0,505	0/1:15,5:18:99:202,0,417	0/1:14,6:19:99:336,0,438	0/1:17,8:21:99:440,0,433	0/0:8,0:8:24.08:0,24,392	0/1:6,4:10:79.69:214,0,80	0/1:12,4:15:99:198,0,221	0/1:10,4:13:99:195,0,308	0/1:10,4:14:99:221,0,323	0/1:6,7:11:58.84:240,0,59	0/1:10,4:11:99:198,0,181	0/1:12,5:15:99:198,0,485	0/1:9,6:17:99:206,0,355	0/1:10,3:11:83.80:84,0,258	0/1:12,7:18:99:422,0,434	0/0:14,0:14:42.14:0,42,685	0/0:18,0:17:33.06:0,33,500	0/1:8,5:12:99:264,0,213	0/1:10,12:22:99:608,0,395	0/1:9,10:17:99:557,0,198	0/1:2,3:4:36.85:137,0,37
chr10	40900265	.	C	CTT	2633.77	PASS	AB=0.809;AC=18;AF=0.321;AN=56;BaseQRankSum=10.813;DP=512;FS=32.372;HRun=0;HaplotypeScore=116.3186;InbreedingCoeff=-0.3680;MQ=41.51;MQ0=35;MQRankSum=-7.210;QD=10.05;ReadPosRankSum=-0.257;VQSLOD=1.2968;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:17,7:23:99:307,0,477	0/1:3,1:4:27.52:28,0,135	0/0:43,0:6:15.05:0,15,231	0/0:63,0:12:29.42:0,29,449	1/1:9,1:9:3.01:59,3,0	0/0:23,0:22:35.72:0,36,613	0/0:25,0:25:52.23:0,52,820	0/0:20,0:20:42.07:0,42,620	0/0:16,0:16:13.07:0,13,636	0/1:13,4:16:99:185,0,534	0/1:17,6:19:99:321,0,439	0/0:11,0:11:27.08:0,27,407	0/0:8,0:8:18.05:0,18,270	0/1:13,1:15:41.59:42,0,329	0/1:13,4:15:99:145,0,354	0/1:11,4:15:99:199,0,383	0/1:9,4:13:78.55:174,0,79	0/1:13,4:14:99:152,0,221	0/1:14,4:14:99:143,0,375	0/1:10,3:13:99:148,0,308	0/1:11,2:12:99:101,0,220	0/1:13,4:16:99:204,0,440	0/0:14,0:14:42.14:0,42,678	0/0:20,0:19:26.93:0,27,410	0/1:9,1:9:18.94:19,0,262	0/1:12,4:16:99:183,0,460	0/1:12,6:17:99:385,0,288	0/0:3,0:2:3.01:0,3,49
chr10	40900272	.	CCT	C	745.87	PASS	AB=0.896;AC=20;AF=0.385;AN=52;BaseQRankSum=-2.362;DP=562;FS=15.714;HRun=0;HaplotypeScore=117.1024;InbreedingCoeff=0.5200;MQ=43.33;MQ0=37;MQRankSum=2.180;QD=3.50;ReadPosRankSum=1.746;VQSLOD=1.8372;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:20,1:22:20.56:73,0,21	1/1:5,0:5:2.84:14,3,0	./.	./.	0/0:16,0:15:8.39:0,8,39	1/1:16,2:18:12.01:122,12,0	1/1:13,8:23:8.63:137,9,0	0/0:19,0:19:5.98:0,6,56	0/1:21,0:18:8.42:8,0,83	1/1:18,2:19:11.19:95,11,0	1/1:18,1:16:18.41:150,18,0	0/1:14,1:14:2.78:3,0,295	0/0:7,0:7:13.17:0,13,93	0/0:19,0:20:11.75:0,12,90	1/1:9,8:16:9.02:99,9,0	0/0:15,0:20:7.12:0,7,50	0/0:5,0:15:2.74:0,3,12	0/1:10,5:14:26.82:27,0,31	0/0:25,0:22:14.52:0,15,95	0/0:19,0:23:10.78:0,11,63	0/0:9,0:12:3:0,3,26	1/1:21,0:19:15.27:109,15,0	0/0:19,0:18:15.05:0,15,220	0/0:13,0:24:15:0,15,139	1/1:12,1:12:11.22:90,11,0	0/0:19,0:21:23.88:0,24,181	0/0:14,0:16:8.93:0,9,63	0/0:6,0:11:11.40:0,11,68
chr10	40900274	.	T	TC	732.26	PASS	AB=0.925;AC=13;AF=0.232;AN=56;BaseQRankSum=9.189;DP=588;FS=0.564;HRun=2;HaplotypeScore=133.7431;InbreedingCoeff=0.1954;MQ=43.96;MQ0=35;MQRankSum=-4.603;QD=3.77;ReadPosRankSum=-2.553;VQSLOD=-0.5457;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:22:22.01:22,0,151	0/0:5,0:5:2.13:0,2,5	0/0:35,0:5:12.04:0,12,151	0/0:57,0:12:24.04:0,24,299	0/0:10,7:17:7.40:0,7,55	0/0:20,0:19:17.54:0,18,143	0/0:23,0:23:45.54:0,46,457	0/0:21,0:20:39.46:0,39,469	1/1:15,7:19:35.79:405,36,0	0/1:21,0:20:16.92:17,0,369	0/1:21,0:18:9.85:10,0,196	0/0:18,0:17:41.92:0,42,506	1/1:3,7:10:17.95:197,18,0	0/1:10,12:21:51.83:72,0,52	0/0:19,0:18:6.30:0,6,109	0/1:15,4:19:38.46:118,0,38	1/1:14,0:14:4.07:12,4,0	0/0:18,0:16:4.64:0,5,180	0/0:27,0:23:21:0,21,339	0/0:23,0:23:8.13:0,8,140	0/0:13,0:13:6.55:0,7,162	0/1:24,0:21:24.49:24,0,121	0/0:22,0:21:39.11:0,39,481	0/0:26,0:25:23.34:0,23,248	0/0:17,0:16:11.52:0,12,123	0/0:21,0:21:37.06:0,37,410	0/1:18,0:17:15.56:16,0,237	0/0:11,0:11:15.90:0,16,123
chr10	40900655	.	TG	T	3218.91	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=14.765;DP=548;FS=18.039;HRun=6;HaplotypeScore=68.8519;InbreedingCoeff=0.9990;MQ=83.53;MQ0=1;MQRankSum=-4.368;QD=26.17;ReadPosRankSum=2.654;VQSLOD=2.1755;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:48.16:0,48,630	0/0:7,0:7:21.04:0,21,259	0/0:21,0:19:45.15:0,45,592	0/0:19,0:17:45.15:0,45,585	1/1:0,15:15:30.08:322,30,0	0/0:18,0:18:48.15:0,48,618	0/0:20,0:20:51.17:0,51,671	0/0:26,0:26:75.20:0,75,967	1/1:0,15:15:42.11:451,42,0	0/0:29,0:29:75.23:0,75,973	0/0:16,0:15:45.15:0,45,592	0/0:13,0:13:33.11:0,33,434	1/1:1,23:24:66.16:709,66,0	1/1:2,22:24:63.15:676,63,0	0/0:19,0:19:57.19:0,57,749	1/1:3,23:26:69.17:740,69,0	1/1:3,16:19:48.10:508,48,0	0/0:18,0:18:54.18:0,54,710	0/0:24,0:24:63.18:0,63,800	0/0:24,0:24:57.17:0,57,735	0/0:14,0:14:39.11:0,39,497	0/0:21,0:21:63.20:0,63,824	0/0:16,0:16:45.14:0,45,578	0/0:24,0:24:72.23:0,72,947	0/0:19,0:19:54.18:0,54,710	0/0:28,0:28:84.26:0,84,1092	0/0:17,0:17:51.17:0,51,671	0/0:13,0:13:39.13:0,39,513
chr10	40900901	.	A	ATCAGACTGACT	17112.25	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-1.581;DP=752;FS=4.512;HRun=0;HaplotypeScore=219.6061;InbreedingCoeff=0.9993;MQ=85.39;MQ0=0;MQRankSum=-14.307;QD=110.40;ReadPosRankSum=0.838;VQSLOD=4.6037;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,120,4152	0/0:9,0:9:27.09:0,27,955	0/0:32,0:32:90.22:0,90,2608	0/0:24,0:23:56.97:0,57,1679	1/1:2,10:15:33.03:1605,33,0	0/0:36,0:36:99:0,102,3426	0/0:30,0:30:87.30:0,87,3014	0/0:44,0:44:99:0,132,4186	1/1:8,9:17:45.12:2162,45,0	0/0:32,0:32:96.26:0,96,3132	0/0:23,0:23:66.22:0,66,2286	0/0:32,0:32:93.28:0,93,2903	1/1:11,14:25:75.20:3314,75,0	1/1:10,21:40:84.25:4554,84,0	0/0:39,0:39:99:0,111,3836	1/1:8,17:37:71.76:3736,72,0	1/1:4,9:21:30.10:1741,30,0	0/0:10,0:10:27.09:0,27,947	0/0:13,0:12:30.09:0,30,982	0/0:21,0:21:63.20:0,63,2129	0/0:20,0:20:60.21:0,60,2123	0/0:26,0:26:66.05:0,66,2163	0/0:32,0:32:90.27:0,90,2933	0/0:30,0:30:90.29:0,90,2941	0/0:21,0:21:60.14:0,60,1960	0/0:32,0:31:93.27:0,93,3001	0/0:35,0:34:96.31:0,96,3287	0/0:14,0:14:42.12:0,42,1436
chr10	40900914	.	C	CTT	1875.43	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=4.341;DP=723;FS=2.109;HRun=2;HaplotypeScore=130.5390;InbreedingCoeff=0.9990;MQ=83.34;MQ0=0;MQRankSum=-5.459;QD=45.74;ReadPosRankSum=-0.976;VQSLOD=3.2712;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,108,1569	0/0:11,0:11:33.09:0,33,459	0/0:25,0:26:66.03:0,66,874	0/0:22,0:22:60.10:0,60,793	0/0:24,0:24:57.16:0,57,793	0/0:31,0:31:87.28:0,87,1259	0/0:27,0:27:81.26:0,81,1167	0/0:48,0:48:99:0,129,1865	1/1:2,13:15:42.06:710,42,0	0/0:33,0:33:93.31:0,93,1368	0/0:21,0:21:63.21:0,63,922	0/0:27,0:27:81.27:0,81,1185	1/1:4,22:26:69.24:1287,69,0	0/0:34,0:34:89.91:0,90,1195	0/0:33,0:33:96.31:0,96,1394	0/0:28,0:28:71.76:0,72,985	0/0:22,0:22:45.02:0,45,583	0/0:10,0:10:27.09:0,27,397	0/0:13,0:13:30.08:0,30,406	0/0:27,0:27:78.23:0,78,1105	0/0:19,0:19:48.14:0,48,683	0/0:27,0:27:72.23:0,72,1038	0/0:28,0:28:78.25:0,78,1127	0/0:29,0:29:81.26:0,81,1172	0/0:20,0:20:51.17:0,51,751	0/0:31,0:30:84.28:0,84,1231	0/0:35,0:35:99:0,99,1448	0/0:14,0:14:42.14:0,42,618
chr10	40901340	.	A	AT	7273.32	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-15.773;DP=755;FS=2.287;HRun=1;HaplotypeScore=101.6526;InbreedingCoeff=0.9996;MQ=76.00;MQ0=0;MQRankSum=0.256;QD=39.74;ReadPosRankSum=3.128;VQSLOD=5.1218;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,144,1788	0/0:15,0:15:45.15:0,45,583	0/0:15,0:15:35.46:0,35,429	0/0:15,0:15:25.97:0,26,301	1/1:2,26:28:66.14:939,66,0	0/0:26,0:26:72.22:0,72,920	0/0:18,0:18:51.17:0,51,662	0/0:30,0:30:90.29:0,90,1157	1/1:0,32:32:96.32:1434,96,0	0/0:47,0:47:99:0,138,1735	0/0:16,0:16:36.12:0,36,467	0/0:31,0:31:93.29:0,93,1193	1/1:0,23:23:69.23:1034,69,0	1/1:2,29:31:78.26:1169,78,0	0/0:35,0:35:99:0,105,1343	1/1:4,36:40:96.32:1439,96,0	1/1:1,28:29:84.28:1259,84,0	0/0:20,0:20:60.20:0,60,779	0/0:18,0:18:54.14:0,54,662	0/0:26,0:26:66.15:0,66,842	0/0:33,0:33:96.30:0,96,1231	0/0:27,0:27:78.22:0,78,971	0/0:18,0:18:51.15:0,51,648	0/0:38,0:38:99:0,108,1384	0/0:20,0:20:60.20:0,60,779	0/0:37,0:37:99:0,105,1363	0/0:29,0:28:87.28:0,87,1129	0/0:10,0:10:30.10:0,30,389
chr10	40901922	.	GTTTTT	G	4484.27	PASS	AB=0.693;AC=40;AF=0.714;AN=56;BaseQRankSum=5.168;DP=446;FS=0.000;HRun=21;HaplotypeScore=107.4930;InbreedingCoeff=0.5740;MQ=68.96;MQ0=6;MQRankSum=-6.666;QD=14.01;ReadPosRankSum=4.155;VQSLOD=-0.7617;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:14,5:21:56.67:107,0,57	0/1:2,1:4:3.82:36,0,4	0/0:39,0:17:0.84:0,1,246	0/0:25,0:13:13.95:0,14,161	1/1:9,0:24:4.31:436,4,0	0/0:9,1:21:3.03:0,3,231	0/0:3,0:7:0.17:0,0,37	1/1:19,1:30:27.42:267,27,0	1/1:6,0:18:32.80:332,33,0	1/1:9,11:21:35.44:481,35,0	1/1:6,6:15:0.55:267,1,0	0/0:13,0:13:30.10:0,30,687	1/1:2,0:6:11.90:121,12,0	1/1:4,0:12:14.48:151,14,0	1/1:14,5:21:13.24:249,13,0	1/1:1,0:6:8.97:91,9,0	1/1:8,0:20:32.78:332,33,0	1/1:5,6:11:9.13:124,9,0	1/1:9,0:15:20.03:171,20,0	1/1:7,1:19:26.44:276,26,0	1/1:5,0:5:0.24:1,0,0	1/1:2,6:9:5.37:88,5,0	0/0:13,0:17:34.36:0,34,611	0/0:3,0:3:5.99:0,6,70	1/1:9,9:19:29.10:360,29,0	1/1:7,0:14:19.67:188,20,0	1/1:6,0:16:23.70:243,24,0	1/1:2,1:11:15.03:163,15,0
chr10	40902721	.	C	CG	5286.63	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-11.522;DP=697;FS=7.267;HRun=2;HaplotypeScore=70.8394;InbreedingCoeff=0.9997;MQ=70.69;MQ0=6;MQRankSum=1.541;QD=33.67;ReadPosRankSum=1.250;VQSLOD=4.8007;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:53:99:0,135,1667	0/0:12,0:12:33.08:0,33,393	0/0:34,0:21:60.12:0,60,703	0/0:28,0:17:39.11:0,39,465	1/1:3,28:30:72.23:1019,72,0	0/0:32,0:32:87.27:0,87,1076	0/0:22,0:22:63.16:0,63,760	0/0:34,0:30:78.07:0,78,896	1/1:4,22:24:66.22:922,66,0	0/0:21,0:21:60.19:0,60,743	0/0:15,0:15:45.14:0,45,556	0/0:24,0:24:63.19:0,63,767	1/1:1,17:18:39.13:560,39,0	1/1:0,23:23:57.19:819,57,0	0/0:24,0:24:57.15:0,57,705	1/1:3,19:22:48.15:675,48,0	1/1:0,37:37:90.30:1292,90,0	0/0:23,0:23:57.04:0,57,682	0/0:24,0:23:60.19:0,60,740	0/0:17,0:16:45.14:0,45,557	0/0:36,0:35:90.28:0,90,1114	0/0:13,0:13:36.11:0,36,444	0/0:13,0:13:39.12:0,39,482	0/0:19,0:19:54.16:0,54,656	0/0:26,0:26:72.23:0,72,891	0/0:31,0:31:78.23:0,78,952	0/0:28,0:28:69.22:0,69,853	0/0:10,0:10:27.08:0,27,334
chr10	40902873	.	TA	T	2864.62	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=5.782;DP=647;FS=0.813;HRun=9;HaplotypeScore=77.8674;InbreedingCoeff=0.9328;MQ=60.56;MQ0=9;MQRankSum=3.757;QD=18.48;ReadPosRankSum=3.108;VQSLOD=3.9292;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:46:99:0,114,1236	0/0:11,0:11:30.09:0,30,346	0/0:18,2:10:0.92:0,1,203	0/0:9,0:2:6.01:0,6,60	1/1:9,24:33:44.59:580,45,0	0/0:30,0:30:84.25:0,84,969	0/0:10,0:10:27.04:0,27,297	0/0:30,0:26:75.22:0,75,865	1/1:3,34:37:93.05:851,93,0	0/0:25,0:25:54.15:0,54,614	0/0:24,0:24:66.20:0,66,762	0/0:15,0:15:36.11:0,36,415	1/1:3,14:17:33.01:302,33,0	1/1:3,12:15:33.02:302,33,0	0/0:16,0:16:48.13:0,48,543	1/1:5,22:27:54:494,54,0	1/1:4,22:26:57.03:522,57,0	0/0:18,0:18:42.12:0,42,485	0/0:28,0:27:72.18:0,72,817	0/0:37,0:38:99:0,99,1120	0/0:8,0:8:24.07:0,24,277	0/0:33,0:33:96.27:0,96,1098	0/0:23,0:24:59.78:0,60,640	0/0:10,0:10:27.08:0,27,312	0/0:27,0:27:69.16:0,69,782	0/0:21,0:22:60:0,60,664	0/0:32,0:32:81.23:0,81,926	0/0:15,0:15:45.12:0,45,511
chr10	40903240	.	CCA	C	5623.93	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=12.414;DP=605;FS=9.194;HRun=0;HaplotypeScore=68.6760;InbreedingCoeff=0.9999;MQ=78.42;MQ0=0;MQRankSum=-5.922;QD=45.72;ReadPosRankSum=2.644;VQSLOD=6.1337;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:72.25:0,72,1463	0/0:15,0:15:45.15:0,45,914	0/0:24,0:24:72.22:0,72,1390	0/0:16,0:15:39.13:0,39,726	1/1:1,18:19:54.18:880,54,0	0/0:17,0:17:51.18:0,51,1025	0/0:27,0:27:81.28:0,81,1635	0/0:25,0:25:75.26:0,75,1525	1/1:0,15:15:45.15:733,45,0	0/0:25,0:25:72.25:0,72,1464	0/0:19,0:19:57.20:0,57,1143	0/0:21,0:21:60.21:0,60,1194	1/1:0,25:25:66.23:1076,66,0	1/1:0,21:21:60.20:977,60,0	0/0:27,0:27:81.28:0,81,1636	1/1:0,19:19:51.17:832,51,0	1/1:0,24:24:69.24:1125,69,0	0/0:13,0:13:39.13:0,39,792	0/0:22,0:22:66.23:0,66,1309	0/0:22,0:22:66.22:0,66,1305	0/0:15,0:15:45.15:0,45,902	0/0:24,0:24:69.24:0,69,1380	0/0:18,0:18:54.19:0,54,1097	0/0:13,0:13:39.13:0,39,793	0/0:23,0:23:69.23:0,69,1346	0/0:42,0:42:99:0,123,2463	0/0:33,0:33:99:0,99,2000	0/0:17,0:17:51.18:0,51,1036
chr10	40904771	.	CTG	C	3727.29	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=11.314;DP=621;FS=0.000;HRun=0;HaplotypeScore=71.8421;InbreedingCoeff=0.9999;MQ=68.76;MQ0=1;MQRankSum=-0.280;QD=37.65;ReadPosRankSum=2.893;VQSLOD=5.7016;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,147,2565	0/0:16,0:16:45.14:0,45,794	0/0:23,0:21:57.19:0,57,985	0/0:20,0:20:41.17:0,41,727	1/1:1,17:18:42.14:593,42,0	0/0:35,0:35:99:0,102,1868	0/0:22,0:22:66.18:0,66,1104	0/0:32,0:32:87.27:0,87,1500	1/1:0,12:12:36.12:515,36,0	0/0:19,0:19:51.16:0,51,872	0/0:14,0:14:42.13:0,42,740	0/0:18,0:18:48.15:0,48,849	1/1:0,13:13:36.12:515,36,0	1/1:0,14:14:42.14:601,42,0	0/0:25,0:25:72.25:0,72,1306	1/1:0,17:17:39.13:558,39,0	1/1:1,24:24:66.22:944,66,0	0/0:24,0:24:69.19:0,69,1199	0/0:19,0:19:42.14:0,42,759	0/0:20,0:20:60.21:0,60,1099	0/0:23,0:23:69.22:0,69,1233	0/0:17,0:17:51.16:0,51,904	0/0:26,0:26:75.16:0,75,1229	0/0:32,0:31:90.26:0,90,1579	0/0:25,0:25:75.24:0,75,1323	0/0:26,0:26:72.22:0,72,1239	0/0:22,0:22:63.22:0,63,1152	0/0:13,0:13:39.10:0,39,680
chr10	40905286	.	G	GCAGGTTTACC	43629.04	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=6.755;DP=733;FS=7.644;HRun=0;HaplotypeScore=240.8345;InbreedingCoeff=0.9900;MQ=80.73;MQ0=0;MQRankSum=-21.058;QD=105.13;ReadPosRankSum=-3.851;VQSLOD=3.2864;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:22,18:40:96.28:3988,96,0	1/1:8,16:25:69.24:3371,69,0	0/0:23,0:23:54.15:0,54,1479	0/0:30,0:30:63.10:0,63,1661	0/0:22,0:22:57.18:0,57,1708	1/1:9,9:18:54.16:2249,54,0	1/1:17,9:26:60.12:2402,60,0	1/1:30,6:27:60.12:2425,60,0	0/0:26,0:26:72.25:0,72,2259	1/1:18,14:33:81.28:3853,81,0	1/1:9,7:16:39.13:1795,39,0	0/0:33,0:33:99:0,99,2896	0/0:33,0:33:96.33:0,96,2960	0/0:26,0:26:75.26:0,75,2374	1/1:14,19:33:96.27:4223,96,0	0/0:27,0:27:72.25:0,72,2281	0/0:34,0:34:99:0,99,3110	1/1:10,4:14:21.07:1067,21,0	1/1:15,6:19:45.14:1914,45,0	1/1:10,14:24:60.19:2712,60,0	1/1:12,3:15:18.05:476,18,0	1/1:15,14:29:69.22:3167,69,0	0/0:31,0:31:84.27:0,84,2596	0/0:33,0:33:99:0,99,3134	1/1:15,12:28:75.26:3440,75,0	1/1:10,11:21:57.20:2573,57,0	1/1:12,15:29:78.24:3508,78,0	1/1:4,3:7:9.03:467,9,0
chr10	40905316	.	TAG	T	11069.11	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=18.415;DP=646;FS=9.175;HRun=0;HaplotypeScore=182.5059;InbreedingCoeff=0.9953;MQ=78.88;MQ0=0;MQRankSum=-15.633;QD=31.54;ReadPosRankSum=-0.214;VQSLOD=5.7349;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,24:29:51.13:707,51,0	1/1:2,12:14:30.10:429,30,0	0/0:18,0:18:54.18:0,54,934	0/0:24,0:24:54.58:0,55,1045	0/0:29,0:29:81.28:0,81,1468	1/1:1,18:19:54.18:773,54,0	1/1:2,17:19:51.17:730,51,0	1/1:4,21:19:57.13:757,57,0	0/0:25,0:25:66.20:0,66,1172	1/1:5,20:25:60.18:838,60,0	1/1:2,14:16:29.84:332,30,0	0/0:32,0:32:87.30:0,87,1571	0/0:28,0:28:84.27:0,84,1488	0/0:29,0:29:84.29:0,84,1539	1/1:1,30:31:90.30:1288,90,0	0/0:20,0:20:54.18:0,54,980	0/0:31,0:31:87.27:0,87,1548	1/1:2,14:16:30.10:430,30,0	1/1:4,13:16:36.09:477,36,0	1/1:2,18:20:33.11:472,33,0	1/1:0,23:23:42.14:600,42,0	1/1:2,21:23:54.05:703,54,0	0/0:24,0:24:72.22:0,72,1250	0/0:35,0:35:99:0,102,1852	1/1:1,21:22:48.16:687,48,0	1/1:3,20:23:60.20:858,60,0	1/1:4,21:25:57.19:816,57,0	1/1:0,4:4:12.04:172,12,0
chr10	40906110	.	TTATATATATATATATATATATATA	T	2016.15	PASS	AB=0.864;AC=16;AF=0.444;AN=36;BaseQRankSum=4.904;DP=146;FS=6.171;HRun=0;HaplotypeScore=89.7970;InbreedingCoeff=-0.1913;MQ=57.90;MQ0=1;MQRankSum=-1.788;QD=21.00;ReadPosRankSum=4.277;VQSLOD=0.7589;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:9,1:10:35.34:175,0,35	1/1:3,0:3:3.01:97,3,0	./.	0/0:4,0:3:6.01:0,6,62	./.	1/1:1,10:10:12.04:750,12,0	./.	0/1:17,0:17:40.65:41,0,172	./.	0/1:5,0:6:67.54:114,0,68	0/0:6,0:6:3.01:0,3,38	./.	0/0:8,0:8:0:0,0,0	./.	0/1:5,0:6:24.07:24,0,38	./.	0/0:8,0:7:9.03:0,9,604	0/1:10,0:10:46.57:243,0,47	0/1:8,0:8:62.20:118,0,62	1/1:5,0:5:2.92:17,3,0	0/0:4,0:4:2.90:0,3,16	./.	./.	0/0:2,0:3:3.01:0,3,275	1/1:2,0:3:3.01:115,3,0	./.	0/1:7,0:9:99:210,0,144	0/1:3,0:5:64.73:232,0,65
chr10	40906132	.	AT	A	128.11	PASS	AB=0.890;AC=12;AF=0.316;AN=38;BaseQRankSum=2.361;DP=91;FS=3.874;HRun=1;HaplotypeScore=60.9088;InbreedingCoeff=-0.0515;MQ=44.68;MQ0=2;MQRankSum=-0.987;QD=2.42;ReadPosRankSum=3.339;VQSLOD=-0.4869;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,0:2:2.04:6,2,0	0/1:1,1:2:7.74:8,0,32	./.	0/0:6,0:3:2.68:0,3,12	./.	1/1:10,0:10:8.70:27,9,0	./.	0/1:13,1:14:41.51:42,0,121	./.	0/1:2,0:2:13.88:30,0,14	0/0:1,0:1:0.47:0,0,1	./.	0/0:1,0:1:0:0,0,0	./.	0/0:2,0:2:5.91:0,6,53	./.	0/0:8,0:7:6.91:0,7,87	0/1:10,0:8:1.44:1,0,34	0/0:9,0:6:6.71:0,7,111	0/1:1,1:2:23.49:34,0,23	0/1:1,0:1:0:0,0,0	./.	./.	0/0:1,0:1:2.04:0,2,6	0/1:4,0:4:27.48:27,0,74	0/0:3,0:3:8.76:0,9,74	0/0:5,0:5:4.05:0,4,49	0/1:5,1:6:62.52:63,0,65
chr10	40906173	.	A	AATAT	5995.22	PASS	AB=0.857;AC=31;AF=0.705;AN=44;BaseQRankSum=-3.475;DP=189;FS=0.000;HRun=0;HaplotypeScore=55.8701;InbreedingCoeff=0.6260;MQ=74.19;MQ0=1;MQRankSum=-1.996;QD=43.44;ReadPosRankSum=0.935;VQSLOD=4.8283;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,0:10:6.02:80,6,0	./.	0/0:9,0:6:2.70:0,3,50	0/0:16,0:13:1.78:0,2,41	./.	0/0:17,0:17:30.10:0,30,488	0/0:1,0:1:3.01:0,3,51	1/1:16,18:36:63.21:1456,63,0	./.	1/1:3,3:6:9.03:224,9,0	1/1:0,3:3:6.02:150,6,0	0/0:2,0:2:6.02:0,6,102	1/1:1,0:1:3.01:33,3,0	1/1:1,0:1:3.01:32,3,0	1/1:0,5:6:14.84:302,15,0	./.	0/1:5,0:6:0:0,0,0	1/1:5,11:16:36.12:871,36,0	1/1:4,5:9:18.06:437,18,0	1/1:0,2:2:6.02:149,6,0	1/1:1,3:4:9.03:224,9,0	./.	0/0:2,0:2:6.02:0,6,102	./.	1/1:3,5:9:21.07:474,21,0	1/1:2,3:6:12.03:239,12,0	1/1:1,6:7:18.06:448,18,0	1/1:4,11:16:36.12:874,36,0
chr10	40906188	.	A	ATATATATT	1138.17	PASS	AB=1.000;AC=27;AF=0.482;AN=56;BaseQRankSum=7.316;DP=208;FS=0.000;HRun=0;HaplotypeScore=70.5846;InbreedingCoeff=0.0320;MQ=82.30;MQ0=1;MQRankSum=-4.437;QD=7.34;ReadPosRankSum=6.522;VQSLOD=0.3689;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:10,0:10:80.89:85,0,81	0/0:2,0:2:5.99:0,6,50	0/0:7,0:7:5.58:0,6,104	0/0:14,0:14:5.59:0,6,128	1/1:3,0:3:6:54,6,0	0/0:18,0:18:42.08:0,42,888	0/0:1,0:1:3.01:0,3,90	0/1:34,0:34:99:161,0,283	1/1:3,0:3:9:78,9,0	0/1:6,0:6:20.44:20,0,63	0/1:7,0:7:7.10:7,0,82	0/0:2,0:2:6.02:0,6,178	1/1:0,1:4:3.01:105,3,0	1/1:6,0:6:15.02:171,15,0	0/1:8,0:8:23.87:24,0,59	1/1:1,0:1:3:28,3,0	0/1:4,0:4:17.98:20,0,18	0/1:15,0:15:25.54:97,0,26	0/1:12,0:12:40.27:40,0,142	0/1:3,0:3:16.38:17,0,16	1/1:5,0:5:8.29:38,8,0	0/0:2,0:2:5.99:0,6,50	0/0:2,0:2:6.02:0,6,181	0/0:2,0:2:2.99:0,3,24	1/1:7,0:7:16.89:117,17,0	0/1:6,0:6:11.58:12,0,67	0/1:7,0:7:5.13:60,0,5	1/1:14,0:14:14.59:176,15,0
chr10	40907651	.	CGTGTGTGTGTGTGTGTGTGT	C	9341.47	PASS	AB=0.848;AC=27;AF=0.519;AN=52;BaseQRankSum=8.683;DP=789;FS=20.173;HRun=0;HaplotypeScore=359.9634;InbreedingCoeff=0.4101;MQ=51.35;MQ0=17;MQRankSum=-3.778;QD=18.61;ReadPosRankSum=-1.918;VQSLOD=1.2608;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:11,24:34:12:504,12,0	0/1:8,0:8:0:0,0,0	./.	./.	0/0:20,0:18:24.07:0,24,1330	0/0:23,0:21:13.60:0,14,259	0/0:32,0:32:9.50:0,9,139	0/1:21,17:36:46.26:530,0,46	0/1:30,0:29:91.16:646,0,91	0/1:14,23:37:13.03:1322,0,13	1/1:4,14:18:13.42:84,13,0	0/0:29,0:30:52.43:0,52,3003	0/1:30,0:30:37.41:570,0,37	0/0:31,0:31:49.66:0,50,1900	1/1:14,30:44:40.73:1395,41,0	0/0:28,0:28:54.10:0,54,2592	0/0:17,0:16:30.02:0,30,827	0/1:10,14:23:99:630,0,153	1/1:16,10:22:0.22:310,0,0	1/1:5,20:25:3.35:360,3,0	0/1:62,0:61:4.08:390,0,4	1/1:8,26:33:12.79:224,13,0	0/0:18,0:19:14.96:0,15,1528	0/0:48,0:52:87.75:0,88,5654	1/1:7,12:19:8.39:511,8,0	1/1:12,18:30:16.58:870,17,0	1/1:7,22:29:13.33:835,13,0	1/1:4,9:13:3.01:161,3,0
chr10	40907678	.	GTGTGTGTGTGTGTT	G	3921.52	PASS	AB=0.996;AC=20;AF=0.357;AN=56;BaseQRankSum=9.026;DP=689;FS=1.654;HRun=0;HaplotypeScore=267.0606;InbreedingCoeff=-0.0059;MQ=47.87;MQ0=22;MQRankSum=-7.213;QD=10.49;ReadPosRankSum=4.282;VQSLOD=2.0331;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:34,0:32:82:215,0,82	0/1:8,0:8:15.85:16,0,42	1/1:8,0:2:5.04:35,5,0	0/0:14,0:3:8.99:0,9,80	0/0:17,0:15:21.06:0,21,676	0/0:26,0:24:12.09:0,12,90	0/1:30,0:30:29.88:30,0,30	0/0:26,0:24:44.36:0,44,418	1/1:23,8:30:13.92:658,14,0	0/1:30,0:29:99:295,0,434	0/0:19,0:18:16.31:0,16,144	0/0:27,0:26:53.86:0,54,1885	1/1:20,6:26:35.91:739,36,0	0/0:29,0:29:27.55:0,28,766	0/1:41,0:40:99:583,0,158	0/0:24,0:24:19.90:0,20,1209	0/0:17,0:16:15.01:0,15,277	0/1:18,0:18:99:289,0,123	0/1:14,0:11:59.78:60,0,83	0/1:26,0:26:99:154,0,141	0/0:52,0:51:35.48:0,35,270	0/1:33,0:32:49.58:50,0,171	0/0:14,0:14:26.44:0,26,1176	0/0:50,0:50:99:0,111,4287	0/1:15,0:15:20.34:239,0,20	0/1:22,0:21:99:119,0,290	0/1:26,0:26:64.84:363,0,65	1/1:10,0:10:3.01:78,3,0
chr10	40907684	.	GTGTGTGTT	G	1798.33	PASS	AB=1.000;AC=25;AF=0.446;AN=56;BaseQRankSum=9.806;DP=700;FS=2.302;HRun=0;HaplotypeScore=228.1428;InbreedingCoeff=-0.0252;MQ=48.80;MQ0=21;MQRankSum=-7.102;QD=3.94;ReadPosRankSum=5.572;VQSLOD=2.4454;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:38,0:36:79.84:80,0,146	1/1:8,0:8:5.79:31,6,0	0/1:13,0:6:18.06:18,0,65	0/0:15,0:3:8.99:0,9,80	0/0:17,0:15:15.02:0,15,212	1/1:25,3:27:1.75:29,2,0	1/1:30,1:31:8.30:132,8,0	0/0:28,0:26:47.63:0,48,397	1/1:28,0:27:12.09:377,12,0	0/1:33,0:32:99:104,0,645	0/0:20,0:19:19.15:0,19,176	0/0:29,0:28:50.83:0,51,1101	1/1:20,0:20:31.79:406,32,0	0/0:28,0:28:22.11:0,22,225	0/1:43,0:42:99:240,0,202	0/1:25,0:25:17.64:18,0,366	0/1:15,0:14:13.14:13,0,47	0/1:21,0:20:99:112,0,112	0/1:14,0:12:14.96:15,0,108	0/1:28,0:28:57.35:57,0,182	0/0:37,0:36:45.84:0,46,335	0/1:33,0:32:7.24:7,0,171	0/0:15,0:15:27.63:0,28,745	0/0:54,0:54:99:0,114,2557	0/1:16,0:16:45.33:100,0,45	0/1:25,0:24:37.83:38,0,523	0/1:28,0:28:60.53:162,0,61	1/1:9,0:9:3.01:36,3,0
chr10	40907686	.	GTGTGTT	G	1336.03	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=9.618;DP=717;FS=1.553;HRun=0;HaplotypeScore=216.9917;InbreedingCoeff=-0.0256;MQ=48.78;MQ0=20;MQRankSum=-7.318;QD=2.98;ReadPosRankSum=5.376;VQSLOD=2.5372;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:38,0:36:38.11:38,0,146	1/1:8,0:8:5.71:43,6,0	0/1:18,0:9:17.04:17,0,92	0/0:16,0:4:11.87:0,12,95	0/0:17,0:15:9.35:0,9,90	1/1:27,1:27:6.25:63,6,0	1/1:28,4:32:8.47:134,8,0	0/0:30,0:29:37.56:0,38,417	1/1:29,0:28:12.03:307,12,0	0/1:33,0:32:48.09:48,0,533	0/0:20,0:19:19.20:0,19,157	0/0:30,0:29:52.32:0,52,904	1/1:20,0:20:34.53:357,35,0	0/1:27,0:27:6.67:7,0,59	0/1:43,0:42:99:128,0,202	0/1:25,0:25:82.20:82,0,192	0/1:16,0:15:14.87:32,0,15	0/1:21,0:20:54.63:55,0,114	0/0:15,0:13:1.99:0,2,134	0/1:28,0:28:33.94:34,0,179	0/0:37,0:36:46.06:0,46,337	0/0:34,0:33:9.69:0,10,198	0/0:16,0:16:31.13:0,31,632	0/0:54,0:54:99:0,109,1979	0/1:16,0:16:45.37:58,0,45	0/1:25,0:24:10.06:10,0,485	0/1:29,0:29:83.64:89,0,84	0/1:12,0:12:10.70:11,0,48
chr10	40907688	.	GTGTT	G	1132.21	PASS	AB=1.000;AC=22;AF=0.393;AN=56;BaseQRankSum=8.365;DP=721;FS=11.808;HRun=0;HaplotypeScore=203.7419;InbreedingCoeff=0.3075;MQ=48.66;MQ0=19;MQRankSum=-5.968;QD=3.14;ReadPosRankSum=4.713;VQSLOD=1.5159;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:36:2.14:0,2,150	1/1:9,0:9:5.71:43,6,0	0/1:19,0:9:15.07:15,0,92	0/0:15,0:4:11.87:0,12,95	0/1:17,0:15:11.28:42,0,11	1/1:8,20:27:7.66:134,8,0	1/1:6,26:32:8.59:84,9,0	0/0:30,0:29:37.39:0,37,414	1/1:29,0:28:12.90:240,13,0	0/0:33,0:32:5.56:0,6,484	0/0:20,0:19:20.46:0,20,146	0/0:28,0:27:27.11:0,27,645	1/1:20,0:20:37.94:313,38,0	1/1:25,1:26:11.54:98,12,0	0/1:44,0:43:17.72:18,0,230	0/1:27,0:27:64.86:175,0,65	1/1:15,0:14:10.16:87,10,0	0/1:22,0:21:2.74:3,0,121	0/0:15,0:13:15.36:0,15,148	0/1:28,0:28:18.97:19,0,175	0/0:37,0:37:47.88:0,48,339	0/0:34,0:33:23.27:0,23,212	0/0:17,0:17:35.45:0,35,519	0/0:54,0:54:44.37:0,44,1432	0/1:16,0:16:24.28:24,0,46	0/0:26,0:25:19.84:0,20,419	0/1:29,0:29:22.19:22,0,86	0/0:12,0:12:2.78:0,3,51
chr10	40907690	.	GTT	G	1216.65	PASS	AB=0.992;AC=23;AF=0.411;AN=56;BaseQRankSum=2.945;DP=727;FS=5.889;HRun=3;HaplotypeScore=188.5860;InbreedingCoeff=0.5700;MQ=48.75;MQ0=18;MQRankSum=-0.938;QD=3.53;ReadPosRankSum=1.081;VQSLOD=-0.3639;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:39:32.41:0,32,240	1/1:8,1:9:5.70:44,6,0	0/1:22,0:9:8.07:8,0,92	0/0:18,0:5:14.66:0,15,108	1/1:14,3:15:14.97:138,15,0	1/1:25,0:24:5.81:41,6,0	1/1:32,0:32:8.70:61,9,0	0/0:30,0:29:37.05:0,37,412	1/1:30,0:29:20.39:206,20,0	0/0:35,0:34:34.89:0,35,452	0/0:20,0:19:21.35:0,21,147	0/1:24,1:24:13.34:13,0,455	1/1:21,0:21:40.83:257,41,0	1/1:24,2:26:20.61:189,21,0	0/0:44,0:43:46.77:0,47,316	1/1:24,1:25:31.44:291,31,0	1/1:15,0:14:11.95:127,12,0	0/0:21,0:21:3.63:0,4,141	0/0:15,0:13:22.58:0,23,162	0/1:28,0:28:11.61:12,0,160	0/0:37,0:37:49.26:0,49,342	0/0:36,0:35:32.70:0,33,250	0/0:18,0:18:29.74:0,30,396	0/1:54,0:54:18.73:19,0,914	0/1:16,0:16:11.70:12,0,50	0/0:26,0:25:36.14:0,36,376	0/0:29,0:29:15.30:0,15,134	0/0:12,0:12:10.66:0,11,65
chr10	40907699	.	TGA	T	220.16	PASS	AB=0.982;AC=13;AF=0.232;AN=56;BaseQRankSum=1.705;DP=761;FS=10.977;HRun=0;HaplotypeScore=199.3008;InbreedingCoeff=0.3047;MQ=48.51;MQ0=16;MQRankSum=-1.179;QD=0.90;ReadPosRankSum=0.812;VQSLOD=1.8265;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:41:22.23:0,22,554	1/1:10,0:10:5.07:44,5,0	0/1:24,1:10:9.94:10,0,339	0/1:24,0:10:5.19:5,0,263	0/1:15,0:14:0.16:16,0,0	0/0:27,0:27:17.50:0,17,145	0/0:37,0:37:15.97:0,16,149	0/0:26,0:25:48.10:0,48,677	0/0:31,0:31:17.92:0,18,208	0/0:37,1:37:52.70:0,53,1142	0/0:20,1:20:27.09:0,27,423	0/0:25,0:25:53.28:0,53,777	0/0:21,0:21:16.66:0,17,182	0/1:20,0:20:0.04:0,0,1	0/1:41,3:43:39.83:40,0,700	1/1:25,0:25:19.30:117,19,0	0/1:15,0:15:0.31:26,0,0	0/0:23,0:23:35.24:0,35,425	0/0:15,0:13:21.05:0,21,293	0/0:29,0:29:35.95:0,36,506	0/0:52,0:52:79:0,79,1080	0/0:37,0:36:48.14:0,48,713	0/1:16,0:16:0.66:1,0,480	0/0:54,0:54:86.62:0,87,1398	0/1:21,0:20:41.27:41,0,245	0/0:25,0:24:54.17:0,54,792	0/1:28,2:30:67.35:67,0,398	0/0:12,0:12:24.01:0,24,275
chr10	40908742	.	C	CT	1200.38	PASS	AB=0.569;AC=3;AF=0.054;AN=56;BaseQRankSum=-7.464;DP=665;FS=3.253;HRun=2;HaplotypeScore=69.2305;InbreedingCoeff=0.6113;MQ=55.30;MQ0=5;MQRankSum=2.878;QD=26.68;ReadPosRankSum=-0.741;VQSLOD=3.1467;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:41:99:0,117,1419	0/0:7,0:7:21.07:0,21,260	0/0:15,0:4:12.04:0,12,149	0/0:14,0:4:12.01:0,12,130	0/0:32,0:32:90.27:0,90,1102	0/0:25,0:24:60.19:0,60,744	0/0:21,0:20:54.14:0,54,643	0/0:35,0:32:90.27:0,90,1105	0/1:7,22:28:72.18:831,0,72	0/0:25,0:24:66.21:0,66,818	0/0:13,0:11:30.09:0,30,372	0/0:24,0:24:66.21:0,66,817	1/1:5,11:15:33.11:475,33,0	0/0:27,0:26:78.25:0,78,966	0/0:22,0:19:57.18:0,57,707	0/0:24,0:23:42.41:0,42,779	0/0:32,0:32:93.29:0,93,1151	0/0:26,0:24:69.16:0,69,823	0/0:26,0:23:57.16:0,57,687	0/0:21,0:21:63.17:0,63,755	0/0:32,0:30:84.26:0,84,1041	0/0:24,0:24:57.16:0,57,684	0/0:23,0:23:60.19:0,60,743	0/0:25,0:24:69.20:0,69,841	0/0:28,0:28:78.23:0,78,951	0/0:23,0:22:54.16:0,54,656	0/0:23,0:23:63.20:0,63,777	0/0:6,0:6:15.03:0,15,172
chr10	40908805	.	TG	T	4487.14	PASS	AB=0.794;AC=25;AF=0.446;AN=56;BaseQRankSum=19.283;DP=953;FS=7.256;HRun=2;HaplotypeScore=114.0455;InbreedingCoeff=-0.8260;MQ=55.07;MQ0=34;MQRankSum=-16.428;QD=5.38;ReadPosRankSum=8.370;VQSLOD=1.3705;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:40,12:43:0.73:0,1,1672	0/1:8,2:10:53.64:54,0,344	0/0:29,6:19:57.19:0,57,892	0/1:21,6:12:8.73:9,0,441	0/1:40,6:46:99:116,0,1733	0/1:18,11:25:99:182,0,736	0/1:19,13:25:99:137,0,810	0/1:39,21:43:99:230,0,1469	0/1:27,16:40:99:391,0,1063	0/1:27,5:31:74.39:74,0,1173	0/1:14,8:21:99:239,0,473	0/0:27,5:29:42.42:0,42,1253	0/1:24,11:32:99:239,0,1023	0/1:23,8:29:99:167,0,970	0/1:35,10:40:89.25:89,0,1558	0/1:34,9:41:99:170,0,1485	0/1:32,9:40:99:176,0,1413	0/1:20,4:22:20.68:21,0,836	0/1:26,8:28:83.42:83,0,1033	0/1:25,4:28:83.35:83,0,1056	0/1:17,7:23:99:182,0,746	0/1:18,15:33:99:493,0,699	0/1:23,8:30:99:184,0,965	0/1:32,6:37:59.05:59,0,1416	0/1:24,9:33:99:278,0,1039	0/1:21,17:35:99:482,0,879	0/1:26,12:36:99:314,0,1094	0/1:14,2:16:35.65:36,0,623
chr10	40908904	.	G	GC	121.57	PASS	AB=0.842;AC=5;AF=0.089;AN=56;BaseQRankSum=10.290;DP=758;FS=41.094;HRun=0;HaplotypeScore=80.9155;InbreedingCoeff=-0.1107;MQ=58.35;MQ0=14;MQRankSum=-8.172;QD=0.87;ReadPosRankSum=-2.555;VQSLOD=-0.3498;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,1:35:55.32:0,55,1320	0/0:6,0:6:15.05:0,15,209	0/1:19,3:9:26.07:26,0,177	0/1:21,7:16:99:133,0,304	0/0:37,1:37:99:0,99,1361	0/0:31,5:34:71.49:0,71,1196	0/0:17,2:18:30.38:0,30,611	0/0:37,7:39:44.09:0,44,1383	0/1:20,9:29:40.46:40,0,680	0/0:32,6:35:93.30:0,93,1286	0/0:15,1:14:39.13:0,39,545	0/0:22,3:25:42.43:0,42,809	0/0:16,5:20:1.76:0,2,560	0/0:27,1:28:67.45:0,67,1098	0/0:31,4:35:90.30:0,90,1258	0/0:24,10:32:23.90:0,24,950	0/0:26,8:32:6.82:0,7,993	0/0:19,0:17:51.17:0,51,713	0/0:27,1:23:66.22:0,66,923	0/0:26,1:26:75.24:0,75,1026	0/1:28,3:31:22.38:22,0,1043	0/0:22,4:22:60.18:0,60,820	0/0:12,3:12:24.08:0,24,335	0/0:28,3:31:72.42:0,72,1158	0/0:14,0:14:36.12:0,36,503	0/1:25,5:27:15.80:16,0,828	0/0:31,7:35:87.29:0,87,1213	0/0:9,2:9:27.09:0,27,378
chr10	40908970	.	A	AGAGC	1229.11	PASS	AB=0.896;AC=12;AF=0.214;AN=56;BaseQRankSum=9.946;DP=816;FS=65.093;HRun=0;HaplotypeScore=141.0366;InbreedingCoeff=-0.2574;MQ=68.08;MQ0=0;MQRankSum=-9.891;QD=3.37;ReadPosRankSum=0.911;VQSLOD=-0.0836;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:47,8:55:57.11:0,57,2518	0/0:2,4:2:6.02:0,6,120	0/0:26,0:26:69.11:0,69,1161	0/0:22,0:22:46.84:0,47,861	0/0:26,3:26:72.22:0,72,1357	0/1:28,1:28:1.48:1,0,1408	0/1:28,2:30:79.72:80,0,1415	0/0:31,0:31:93.31:0,93,1776	0/1:25,5:30:99:246,0,1112	0/0:37,2:37:21.75:0,22,1863	0/0:19,2:19:51.16:0,51,971	0/1:25,2:27:2.11:2,0,1418	0/1:21,1:22:99:115,0,1071	0/1:34,2:36:58.30:58,0,1739	0/1:37,4:41:46.22:46,0,1929	0/1:35,5:40:99:208,0,1876	0/0:30,9:39:6.81:0,7,1480	0/0:24,2:26:69.19:0,69,1329	0/1:24,3:25:8.76:9,0,1306	0/0:18,5:18:51.15:0,51,949	0/0:38,0:38:99:0,99,1929	0/1:16,7:17:99:113,0,767	0/0:27,3:26:75.23:0,75,1384	0/0:29,1:30:87.30:0,87,1720	0/0:17,2:17:48.58:0,49,884	0/1:21,6:26:99:190,0,1110	0/1:28,5:33:99:304,0,1466	0/0:16,0:16:48.16:0,48,939
chr10	40909302	.	TA	T	4638.65	PASS	AB=0.786;AC=46;AF=0.821;AN=56;BaseQRankSum=0.621;DP=499;FS=4.683;HRun=13;HaplotypeScore=53.3371;InbreedingCoeff=0.7142;MQ=57.85;MQ0=16;MQRankSum=2.458;QD=12.44;ReadPosRankSum=0.586;VQSLOD=4.7916;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,18:23:12.60:234,13,0	1/1:1,2:3:6.44:44,6,0	0/0:45,0:9:14.55:0,15,104	0/0:45,0:12:15.32:0,15,115	1/1:7,14:21:14.91:258,15,0	1/1:5,9:13:23.85:175,24,0	1/1:0,10:11:22.92:159,23,0	1/1:11,16:23:46.28:323,46,0	1/1:3,5:8:14.91:109,15,0	1/1:4,14:18:9.53:233,10,0	1/1:3,18:22:25.57:333,26,0	0/1:13,0:13:2.23:2,0,123	1/1:2,2:5:7.97:50,8,0	1/1:5,4:8:5.91:44,6,0	1/1:4,10:13:23.86:175,24,0	1/1:3,14:18:43.78:312,44,0	1/1:6,21:27:56.66:415,57,0	1/1:3,20:25:47.87:324,48,0	1/1:6,8:13:23.83:175,24,0	1/1:4,17:21:41.68:306,42,0	1/1:3,5:8:10.98:72,11,0	1/1:1,2:3:5.96:44,6,0	0/0:16,2:19:17:0,17,313	0/0:16,0:17:38.18:0,38,390	1/1:3,14:18:40.75:290,41,0	1/1:6,8:15:28.84:202,29,0	0/1:7,21:27:1.75:315,0,2	1/1:4,3:7:5.94:44,6,0
chr10	40909506	.	G	GT	2984.56	PASS	AC=12;AF=0.222;AN=54;BaseQRankSum=-6.705;DP=554;FS=5.079;HRun=6;HaplotypeScore=46.3057;InbreedingCoeff=0.9639;MQ=47.40;MQ0=79;MQRankSum=2.704;QD=25.29;ReadPosRankSum=2.092;VQSLOD=3.3518;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:25:54.12:0,54,550	0/0:6,0:5:9.02:0,9,92	./.	0/0:29,0:2:6:0,6,56	1/1:3,15:12:24.08:302,24,0	0/0:16,0:12:24.05:0,24,245	0/0:16,0:16:33.07:0,33,336	0/0:29,0:29:81.10:0,81,805	1/1:2,17:18:42.13:528,42,0	0/0:17,0:13:33.07:0,33,337	0/0:21,0:19:27.06:0,27,275	0/0:13,0:13:30.06:0,30,306	1/1:1,18:19:48.15:604,48,0	1/1:2,13:13:30.10:377,30,0	0/0:19,0:17:36.08:0,36,367	1/1:1,19:19:48.15:604,48,0	1/1:2,25:24:60.19:755,60,0	0/0:25,0:23:48.11:0,48,490	0/0:23,0:21:54.08:0,54,539	0/0:18,0:14:33.07:0,33,337	0/0:23,0:19:26.93:0,27,274	0/0:9,0:8:21.05:0,21,214	0/0:17,0:15:33.08:0,33,337	0/0:29,0:27:60.12:0,60,605	0/0:19,0:17:42.09:0,42,428	0/0:15,0:14:39.09:0,39,398	0/0:27,0:26:57.10:0,57,573	0/0:8,0:7:21.05:0,21,214
chr10	40909587	.	GA	G	9795.30	PASS	AC=44;AF=0.815;AN=54;BaseQRankSum=5.210;DP=515;FS=2.095;HRun=3;HaplotypeScore=51.0215;InbreedingCoeff=0.9547;MQ=64.33;MQ0=38;MQRankSum=-2.071;QD=24.99;ReadPosRankSum=4.637;VQSLOD=4.1925;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,35:32:84.26:1040,84,0	./.	0/0:25,0:23:64.36:0,64,834	0/0:33,0:28:66.05:0,66,880	1/1:1,23:13:33.10:409,33,0	1/1:1,19:9:21.07:260,21,0	1/1:1,20:18:36.11:446,36,0	1/1:0,8:2:5.98:57,6,0	1/1:3,12:11:30.06:345,30,0	1/1:0,20:10:30.09:371,30,0	1/1:0,16:13:33.10:409,33,0	0/0:21,0:21:57.19:0,57,820	1/1:2,16:16:42.13:520,42,0	1/1:1,19:16:45.14:558,45,0	1/1:0,23:19:51.16:632,51,0	1/1:1,15:10:30.05:354,30,0	1/1:1,31:29:81.19:983,81,0	1/1:1,24:23:45.23:760,45,0	1/1:0,14:10:30.05:343,30,0	1/1:0,9:8:24.03:280,24,0	1/1:0,18:17:48.15:595,48,0	1/1:2,6:6:15.05:186,15,0	0/0:13,0:13:39.13:0,39,561	0/0:29,0:29:78.17:0,78,1059	1/1:0,9:6:18.06:223,18,0	1/1:0,12:9:24.05:281,24,0	1/1:0,24:20:51.16:631,51,0	1/1:0,4:3:9.03:112,9,0
chr10	40910458	.	AC	A	15869.77	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=16.005;DP=849;FS=1.092;HRun=1;HaplotypeScore=84.0751;InbreedingCoeff=0.9998;MQ=86.25;MQ0=0;MQRankSum=-2.827;QD=37.88;ReadPosRankSum=2.174;VQSLOD=5.4624;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,41:41:99:1593,114,0	0/0:14,0:14:42.13:0,42,646	0/0:34,0:34:95.97:0,96,1475	0/0:22,0:22:60.16:0,60,891	0/0:24,0:24:69.24:0,69,1096	0/0:28,0:28:84.29:0,84,1330	0/0:28,0:28:84.27:0,84,1316	1/1:0,24:24:72.21:970,72,0	0/0:33,0:33:99:0,99,1558	1/1:0,36:36:99:1484,108,0	1/1:0,20:20:54.18:755,54,0	0/0:34,0:34:99:0,102,1628	0/0:44,0:44:99:0,129,2051	0/0:47,0:47:99:0,141,2252	1/1:0,37:37:99:1468,105,0	0/0:41,0:41:99:0,123,1940	0/0:27,1:28:39.35:0,39,1168	1/1:0,25:25:69.23:965,69,0	1/1:0,24:24:72.21:984,72,0	1/1:0,38:38:99:1538,111,0	1/1:2,40:42:99:1397,102,0	1/1:0,32:32:72.24:1007,72,0	0/0:22,0:22:66.22:0,66,1046	0/0:31,0:31:93.30:0,93,1455	1/1:0,23:23:66.22:923,66,0	1/1:0,30:30:90.29:1241,90,0	1/1:0,31:31:84.28:1174,84,0	1/1:1,15:16:27.09:369,27,0
chr10	40911038	.	CCGCGCG	C	9865.53	PASS	AB=0.827;AC=32;AF=0.571;AN=56;BaseQRankSum=-0.539;DP=558;FS=12.853;HRun=0;HaplotypeScore=166.4026;InbreedingCoeff=0.2745;MQ=68.42;MQ0=8;MQRankSum=-4.356;QD=24.98;ReadPosRankSum=2.397;VQSLOD=4.1209;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:21,6:27:13.63:388,0,14	0/1:6,1:7:39.72:173,0,40	0/0:35,0:19:33.40:0,33,487	0/0:26,0:17:31.63:0,32,275	1/1:2,13:14:6.02:144,6,0	1/1:13,2:15:15.99:266,16,0	1/1:12,3:14:27.08:500,27,0	1/1:4,16:20:51.16:1052,51,0	0/0:22,0:22:45.12:0,45,921	1/1:21,4:29:12.21:1050,12,0	0/1:12,1:13:24.75:181,0,25	0/0:17,0:17:21.53:0,22,799	0/0:20,0:19:31.46:0,31,707	0/1:3,27:30:41.96:616,0,42	0/1:13,1:18:99:249,0,114	1/1:5,23:29:53.85:1102,54,0	1/1:2,17:19:18.02:340,18,0	0/1:16,2:22:85.31:462,0,85	1/1:9,9:18:47.40:817,47,0	0/1:10,2:12:12.91:115,0,13	0/1:28,7:35:14.15:437,0,14	0/1:15,0:15:1.63:323,0,2	0/0:13,0:13:32.78:0,33,948	0/0:30,0:30:90.31:0,90,2574	0/1:16,1:19:81.71:446,0,82	1/1:12,1:14:32.04:596,32,0	1/1:11,2:13:7.87:348,8,0	1/1:8,1:9:15:259,15,0
chr10	40911039	.	CGCGCGCGT	C	7806.20	PASS	AB=0.988;AC=27;AF=0.482;AN=56;BaseQRankSum=-2.870;DP=564;FS=17.790;HRun=0;HaplotypeScore=194.9809;InbreedingCoeff=-0.0761;MQ=65.87;MQ0=8;MQRankSum=-4.142;QD=19.42;ReadPosRankSum=2.169;VQSLOD=3.2327;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:27:77.53:328,0,78	0/1:7,0:8:99:149,0,139	0/0:32,0:16:33.40:0,33,487	0/0:26,0:17:31.63:0,32,335	0/1:14,1:14:35.20:44,0,35	1/1:15,0:15:15.98:257,16,0	1/1:15,0:14:27.08:499,27,0	1/1:19,0:20:51.16:1063,51,0	0/0:21,0:21:45.12:0,45,1033	0/1:30,0:30:99:858,0,118	0/1:13,0:13:61.14:178,0,61	0/0:17,0:17:42.53:0,43,908	0/0:20,0:19:31.87:0,32,792	0/1:29,1:30:51.25:227,0,51	0/1:18,0:20:99:177,0,363	1/1:27,1:29:42.63:544,43,0	1/1:17,1:18:17.99:233,18,0	0/1:21,0:21:99:389,0,301	1/1:18,0:18:23.74:737,24,0	0/1:9,0:11:44.57:82,0,45	0/1:35,0:35:99:393,0,117	0/1:13,0:15:26.05:246,0,26	0/0:15,0:15:39.13:0,39,1300	0/0:31,0:31:93.32:0,93,3146	0/1:20,0:20:99:361,0,255	0/1:15,0:15:27.70:510,0,28	0/1:14,0:14:99:313,0,108	0/1:12,0:12:99:217,0,147
chr10	40911045	.	C	CGTGTGTGT	6709.71	PASS	AB=0.964;AC=31;AF=0.596;AN=52;BaseQRankSum=-4.025;DP=673;FS=9.900;HRun=0;HaplotypeScore=271.3162;InbreedingCoeff=0.3260;MQ=49.71;MQ0=10;MQRankSum=-0.497;QD=14.34;ReadPosRankSum=-6.997;VQSLOD=0.9039;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:31,0:31:1.72:128,0,2	1/1:10,0:10:10.59:265,11,0	./.	./.	0/0:19,0:18:9.93:0,10,136	1/1:26,0:25:10.20:206,10,0	1/1:20,0:19:16.86:301,17,0	0/1:28,0:27:27.18:349,0,27	1/1:16,10:29:15.03:470,15,0	0/1:30,0:30:20.91:341,0,21	0/1:12,0:12:23.65:67,0,24	0/0:7,0:20:16.80:0,17,333	0/1:14,8:26:1.95:177,0,2	0/0:34,0:34:31.17:0,31,471	0/1:23,0:23:99:254,0,117	0/0:30,0:30:40.64:0,41,667	0/1:22,0:22:1.48:1,0,237	0/1:24,0:24:93.26:120,0,93	1/1:19,0:19:13.38:262,13,0	1/1:14,0:14:7.57:93,8,0	1/1:45,0:45:9.99:329,10,0	1/1:20,0:20:15.15:284,15,0	0/0:19,0:19:23.59:0,24,463	0/0:30,0:34:62.41:0,62,1240	0/1:25,0:25:63.37:197,0,63	1/1:31,0:31:66.22:1714,66,0	1/1:20,0:19:37.92:732,38,0	1/1:12,0:12:18.06:420,18,0
chr10	40912065	.	TG	T	10006	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=15.133;DP=770;FS=1.896;HRun=4;HaplotypeScore=73.0984;InbreedingCoeff=0.9992;MQ=74.19;MQ0=0;MQRankSum=-1.813;QD=31.47;ReadPosRankSum=-1.853;VQSLOD=4.6307;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:60,0:60:99:0,166,2269	0/0:8,0:8:24.08:0,24,336	0/0:15,0:15:45.11:0,45,589	0/0:10,0:10:21.74:0,22,318	0/0:28,0:28:81.22:0,81,1094	0/0:22,0:22:63.21:0,63,881	0/0:30,0:30:87.25:0,87,1195	1/1:1,26:27:78.23:925,78,0	0/0:28,0:28:84.27:0,84,1158	1/1:2,31:33:93.21:1066,93,0	1/1:1,12:13:36.11:432,36,0	0/0:37,0:37:99:0,105,1452	0/0:27,0:27:81.23:0,81,1108	0/0:28,0:28:75.23:0,75,1011	1/1:1,36:37:96.29:1152,96,0	0/0:30,0:30:90.30:0,90,1260	0/0:40,0:40:99:0,114,1575	1/1:1,24:25:63.19:756,63,0	1/1:2,23:25:66.17:759,66,0	1/1:1,23:24:63.16:740,63,0	1/1:3,46:49:99:1350,114,0	0/0:23,0:23:69.23:0,69,963	0/0:25,0:25:75.25:0,75,1048	0/0:41,0:41:99:0,120,1663	1/1:1,20:21:60.14:704,60,0	1/1:1,26:27:78.24:936,78,0	1/1:0,20:20:60.18:720,60,0	1/1:0,17:17:39.12:467,39,0
chr10	40912181	.	TTGTGAGG	T	2481.90	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.570;DP=770;FS=0.000;HRun=0;HaplotypeScore=220.5193;InbreedingCoeff=0.9780;MQ=80.34;MQ0=0;MQRankSum=-9.882;QD=40.69;ReadPosRankSum=0.157;VQSLOD=3.2536;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,150,5630	1/1:0,4:4:9.03:225,9,0	0/0:24,0:24:60.68:0,61,2107	0/0:27,0:26:63.18:0,63,1966	0/0:36,0:36:93.32:0,93,3430	1/1:2,20:22:54.19:1347,54,0	1/1:15,20:35:42.14:1047,42,0	0/0:37,0:37:93.32:0,93,3537	0/0:36,0:36:99:0,99,3732	0/0:19,0:19:54.19:0,54,2008	0/0:10,0:10:30.10:0,30,1144	0/0:37,0:37:99:0,99,3653	0/0:29,0:29:81.26:0,81,3047	0/0:37,0:37:96.32:0,96,3536	0/0:37,0:37:96.32:0,96,3634	0/0:24,0:24:66.21:0,66,2459	0/0:39,0:39:99:0,114,4310	0/0:15,0:15:42.14:0,42,1637	0/0:24,0:24:66.23:0,66,2298	0/0:21,0:21:60.21:0,60,2338	0/0:57,0:57:99:0,157,5874	0/0:18,0:18:45.15:0,45,1747	0/0:18,0:18:45.15:0,45,1745	0/0:30,0:30:87.28:0,87,3214	0/0:15,0:15:45.15:0,45,1752	0/0:26,0:26:72.25:0,72,2776	0/0:30,0:29:81.28:0,81,3045	0/0:10,0:10:24.08:0,24,935
chr10	40914058	.	C	CAAAAA	9504.94	PASS	AB=0.810;AC=38;AF=0.679;AN=56;BaseQRankSum=-0.658;DP=527;FS=12.386;HRun=13;HaplotypeScore=125.7279;InbreedingCoeff=0.7030;MQ=63.01;MQ0=10;MQRankSum=-2.616;QD=24.56;ReadPosRankSum=-6.776;VQSLOD=-0.0308;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:21:25.31:535,25,0	1/1:3,0:6:7.56:27,8,0	0/0:19,0:10:1.91:0,2,139	0/0:17,0:9:7.98:0,8,125	0/0:23,0:22:0.54:0,1,106	1/1:6,0:18:9.03:130,9,0	0/1:7,0:18:8.87:240,0,9	1/1:24,7:34:45.96:732,46,0	1/1:6,0:12:15.05:238,15,0	1/1:23,0:23:43.33:701,43,0	1/1:17,6:27:61.89:1087,62,0	0/0:12,0:12:23.65:0,24,329	1/1:6,0:16:15.04:244,15,0	0/1:22,0:22:55.76:56,0,119	1/1:6,10:19:12.04:240,12,0	0/0:17,0:16:20.28:0,20,130	0/0:16,0:16:7.51:0,8,46	1/1:10,0:22:15.05:272,15,0	1/1:15,0:15:18.95:376,19,0	1/1:9,0:22:42.14:744,42,0	1/1:7,0:7:12.51:269,13,0	1/1:3,4:11:24.03:394,24,0	0/0:15,0:18:35.53:0,36,458	0/0:14,0:14:20.66:0,21,284	1/1:17,0:19:36.12:661,36,0	1/1:6,9:16:36.12:788,36,0	1/1:26,0:25:52.06:1033,52,0	1/1:25,0:24:48.98:738,49,0
chr10	40914071	.	AG	A	5090.64	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=1.512;DP=513;FS=1.091;HRun=1;HaplotypeScore=73.1555;InbreedingCoeff=0.9314;MQ=64.99;MQ0=13;MQRankSum=-1.070;QD=12.60;ReadPosRankSum=-3.044;VQSLOD=2.3157;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,1:19:33.37:228,33,0	1/1:4,0:3:5.75:31,6,0	0/0:36,0:17:29.57:0,30,268	0/0:29,0:15:29.64:0,30,273	1/1:1,18:18:50.65:470,51,0	1/1:16,0:15:15.22:110,15,0	1/1:16,0:16:20.84:127,21,0	1/1:26,0:26:50.97:370,51,0	1/1:13,1:13:15.75:116,16,0	1/1:23,0:23:45.61:325,46,0	1/1:30,0:29:54.62:323,55,0	0/0:12,0:12:35.99:0,36,399	1/1:14,0:14:10.43:75,10,0	1/1:17,9:26:58.68:668,59,0	1/1:12,0:12:8.72:53,9,0	1/1:2,13:14:20.93:263,21,0	1/1:0,16:16:15.03:178,15,0	1/1:21,1:21:17.20:127,17,0	1/1:12,0:12:23.33:156,23,0	1/1:23,0:23:38.45:238,38,0	1/1:7,1:8:13.66:92,14,0	1/1:14,0:14:29.97:198,30,0	0/0:19,0:19:51.72:0,52,502	0/0:12,0:11:23.65:0,24,266	1/1:14,0:14:27.43:153,27,0	1/1:15,0:15:34.24:247,34,0	1/1:25,1:25:34.03:297,34,0	1/1:19,0:17:39.30:247,39,0
chr10	40915143	.	TGTTCTGACCACTTG	T	6404.30	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=12.380;DP=666;FS=0.000;HRun=0;HaplotypeScore=256.4339;InbreedingCoeff=0.9988;MQ=88.87;MQ0=0;MQRankSum=-11.993;QD=72.78;ReadPosRankSum=1.033;VQSLOD=3.7724;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,123,8039	0/0:16,0:16:45.15:0,45,3089	0/0:24,0:24:72.21:0,72,3866	0/0:37,0:37:99:0,105,6059	1/1:5,29:34:83.87:2236,84,0	0/0:19,0:19:57.20:0,57,3681	0/0:23,0:23:66.21:0,66,4059	0/0:26,0:26:69.23:0,69,4205	0/0:26,0:26:78.25:0,78,4981	0/0:29,0:29:84.28:0,84,5277	0/0:18,0:18:51.17:0,51,3122	0/0:19,0:19:57.20:0,57,3815	0/0:20,0:20:60.19:0,60,3754	1/1:3,10:13:27.09:1141,27,0	0/0:35,0:35:99:0,105,7045	1/1:5,17:22:45.02:1887,45,0	1/1:4,15:19:27.09:1141,27,0	0/0:22,0:22:66.23:0,66,4349	0/0:17,0:17:36.12:0,36,2305	0/0:25,0:25:75.24:0,75,4624	0/0:29,0:29:87.28:0,87,5804	0/0:24,0:24:69.13:0,69,3819	0/0:23,0:23:69.24:0,69,4340	0/0:17,0:17:51.18:0,51,3237	0/0:25,0:25:72.23:0,72,4482	0/0:23,0:23:66.22:0,66,4027	0/0:30,0:30:87.28:0,87,5109	0/0:9,0:9:24.08:0,24,1662
chr10	40917568	.	C	CT	1871.81	PASS	AB=0.917;AC=9;AF=0.161;AN=56;BaseQRankSum=-7.881;DP=655;FS=9.916;HRun=10;HaplotypeScore=65.7952;InbreedingCoeff=0.8740;MQ=75.09;MQ0=0;MQRankSum=0.160;QD=15.47;ReadPosRankSum=1.509;VQSLOD=3.3628;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,111,911	0/0:12,0:12:29.96:0,30,246	0/0:19,0:18:17.66:0,18,193	0/0:15,0:14:12.93:0,13,201	1/1:6,26:33:27.53:687,28,0	0/1:20,2:22:8.01:8,0,343	0/0:23,0:23:52.95:0,53,425	0/0:40,0:40:95.86:0,96,788	0/0:20,0:20:56.93:0,57,468	0/0:21,0:21:52.95:0,53,424	0/0:16,0:16:35.93:0,36,293	0/0:24,1:25:24.91:0,25,408	0/0:23,0:23:50.89:0,51,416	1/1:2,16:18:36.09:383,36,0	0/0:30,0:30:74.81:0,75,601	1/1:5,14:20:21.18:400,21,0	1/1:7,21:28:37.02:556,37,0	0/0:18,0:18:35.90:0,36,291	0/0:19,0:19:50.94:0,51,419	0/0:22,0:22:44.92:0,45,369	0/0:37,0:37:92.84:0,93,758	0/0:17,0:17:44.94:0,45,369	0/0:26,0:26:53.92:0,54,443	0/0:19,0:19:56.94:0,57,468	0/0:18,0:20:40.96:0,41,322	0/0:26,0:26:65.91:0,66,541	0/0:32,0:32:71.89:0,72,591	0/0:11,0:11:26.96:0,27,222
chr10	40918209	.	GTTTAGGACTACA	G	21659.93	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=18.395;DP=657;FS=6.588;HRun=0;HaplotypeScore=235.1215;InbreedingCoeff=0.9893;MQ=90.27;MQ0=0;MQRankSum=-15.863;QD=75.73;ReadPosRankSum=1.542;VQSLOD=3.7314;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,28:28:45.15:1529,45,0	0/0:9,0:9:27.08:0,27,1400	0/0:42,0:42:99:0,114,5988	0/0:18,0:18:42.09:0,42,1872	0/0:42,0:42:99:0,120,6528	0/0:29,0:29:87.30:0,87,5360	0/0:26,0:26:78.25:0,78,4489	1/1:2,26:28:75.01:2174,75,0	0/0:27,0:27:75.26:0,75,4470	1/1:2,27:29:78.06:2437,78,0	1/1:0,19:19:36.12:1341,36,0	0/0:20,0:20:60.19:0,60,3354	0/0:17,0:17:51.18:0,51,2852	0/0:31,0:31:87.30:0,87,5298	1/1:0,25:25:51.18:1917,51,0	0/0:29,0:29:84.29:0,84,4998	0/0:37,0:37:99:0,102,6064	1/1:0,6:6:12.04:451,12,0	1/1:3,15:18:41.96:1155,42,0	1/1:0,27:27:69.17:2420,69,0	1/1:0,12:12:12.04:413,12,0	1/1:0,19:19:39.13:1458,39,0	0/0:20,0:20:57.20:0,57,3318	0/0:24,0:24:72.19:0,72,3554	1/1:1,21:22:54.19:2030,54,0	1/1:2,18:20:51.18:1855,51,0	1/1:4,24:28:51.18:1917,51,0	1/1:0,5:5:15.05:564,15,0
chr10	40919923	.	G	GAAAA	5912.17	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=1.384;DP=529;FS=26.442;HRun=13;HaplotypeScore=104.0909;InbreedingCoeff=0.9387;MQ=76.95;MQ0=0;MQRankSum=-3.062;QD=26.39;ReadPosRankSum=-7.729;VQSLOD=-0.7539;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:32:59.44:0,59,740	0/0:7,0:7:14.97:0,15,190	0/0:16,0:17:5.14:0,5,162	0/0:16,0:15:1.38:0,1,49	0/0:13,0:17:29.26:0,29,318	0/0:14,0:15:26.84:0,27,327	0/0:14,0:17:26.13:0,26,295	1/1:21,2:43:82.64:1117,83,0	0/0:23,0:23:53.84:0,54,669	1/1:5,1:14:30.08:449,30,0	1/1:6,12:23:57.08:905,57,0	0/0:19,0:20:44.78:0,45,555	0/0:19,0:19:23.54:0,24,336	0/0:15,0:18:18.65:0,19,371	1/1:9,5:15:16.61:311,17,0	0/0:10,0:13:18.66:0,19,198	0/0:21,0:24:49.09:0,49,595	1/1:5,2:18:24:415,24,0	1/1:9,1:17:26.93:335,27,0	1/1:4,1:20:48.07:636,48,0	1/1:4,1:11:15.85:196,16,0	0/0:18,0:21:40.20:0,40,513	0/0:20,0:21:44.83:0,45,538	0/0:17,0:21:55.36:0,55,646	1/1:6,7:15:21.07:434,21,0	1/1:6,0:15:28.47:371,28,0	1/1:11,2:24:40.73:593,41,0	1/1:2,0:9:12.04:149,12,0
chr10	40920070	.	C	CCAT	639.34	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-0.046;DP=333;FS=0.988;HRun=0;HaplotypeScore=64.8564;InbreedingCoeff=0.8316;MQ=81.00;MQ0=8;MQRankSum=-1.757;QD=19.37;ReadPosRankSum=1.329;VQSLOD=3.4836;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:9:15.04:0,15,226	0/0:4,0:4:9.03:0,9,132	0/0:40,0:21:38.87:0,39,445	0/0:31,0:19:22.43:0,22,411	1/1:6,0:6:11.83:104,12,0	0/0:10,0:10:29.66:0,30,368	0/0:16,0:15:36.12:0,36,553	0/0:17,0:17:48.08:0,48,711	0/0:6,0:6:12.02:0,12,159	0/0:18,0:18:45.09:0,45,519	0/0:9,0:9:19.87:0,20,281	0/0:10,0:10:18.05:0,18,270	0/0:9,0:9:24.06:0,24,332	1/1:6,0:6:12.01:184,12,0	0/0:9,0:8:24.08:0,24,357	1/1:2,2:4:3.01:68,3,0	1/1:2,15:17:21.07:427,21,0	0/0:3,0:3:9.03:0,9,141	0/0:8,0:8:18.05:0,18,260	0/0:8,0:8:14.75:0,15,196	0/0:15,0:14:24.01:0,24,382	0/0:9,0:8:20.86:0,21,291	0/0:3,0:3:6.02:0,6,90	0/0:11,0:11:30.09:0,30,443	0/0:21,0:21:57.13:0,57,782	0/0:15,0:15:42.12:0,42,649	0/0:16,0:16:45.06:0,45,615	0/0:3,0:3:9.03:0,9,143
chr10	40920075	.	C	CT	149.08	PASS	AB=0.938;AC=8;AF=0.143;AN=56;BaseQRankSum=4.679;DP=334;FS=8.017;HRun=0;HaplotypeScore=55.8058;InbreedingCoeff=0.5165;MQ=76.52;MQ0=10;MQRankSum=-1.895;QD=3.39;ReadPosRankSum=2.112;VQSLOD=1.7713;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:8:11.99:0,12,103	0/0:3,0:3:8.04:0,8,59	0/0:50,0:23:2.79:0,3,228	0/0:40,0:20:11.44:0,11,265	1/1:1,3:4:2.86:20,3,0	0/0:8,0:8:19.82:0,20,138	0/0:19,0:18:38.39:0,38,319	0/0:16,0:16:38.92:0,39,330	0/0:5,0:5:8.37:0,8,62	0/1:14,0:14:1.37:1,0,123	0/0:8,0:8:16.24:0,16,134	0/0:8,0:8:17.89:0,18,143	0/0:8,0:8:20.91:0,21,164	0/1:6,1:7:7.34:29,0,7	0/0:11,0:10:26.71:0,27,199	1/1:4,0:4:3.01:30,3,0	1/1:15,0:15:20.98:195,21,0	0/0:3,0:3:8.99:0,9,74	0/0:8,0:8:19.90:0,20,143	0/0:6,0:6:10.10:0,10,74	0/0:15,0:14:23.71:0,24,188	0/0:8,0:7:18.36:0,18,134	0/0:5,0:5:5.90:0,6,43	0/0:12,0:12:24.94:0,25,212	0/0:16,0:16:40.01:0,40,300	0/0:15,0:14:35.70:0,36,295	0/0:13,0:13:32.98:0,33,280	0/0:3,0:3:8.93:0,9,67
chr10	40920530	.	ACTTC	A	8356.15	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=14.785;DP=636;FS=2.033;HRun=0;HaplotypeScore=104.8604;InbreedingCoeff=0.9906;MQ=74.16;MQ0=0;MQRankSum=-3.300;QD=30.50;ReadPosRankSum=1.145;VQSLOD=4.6231;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:69.23:0,69,1663	0/0:9,0:9:24.08:0,24,580	0/0:26,0:19:27.06:0,27,570	0/0:27,0:25:45.15:0,45,1098	0/0:17,0:17:45.15:0,45,1107	0/0:24,0:24:66.15:0,66,1370	0/0:23,0:23:51.12:0,51,1138	1/1:9,18:27:54.10:794,54,0	0/0:24,0:24:60.21:0,60,1482	1/1:4,21:25:60.13:926,60,0	1/1:3,18:21:30.10:504,30,0	0/0:18,0:18:42.14:0,42,1026	0/0:22,0:22:48.15:0,48,1133	0/0:20,0:20:42.14:0,42,1040	1/1:7,27:34:60.21:1007,60,0	0/0:19,0:19:48.03:0,48,1109	0/0:34,0:34:87.17:0,87,1982	1/1:4,14:18:39.09:625,39,0	1/1:9,8:17:26.96:390,27,0	1/1:1,19:20:48.12:763,48,0	1/1:6,22:27:33.11:554,33,0	0/0:19,0:19:42.14:0,42,1015	0/0:17,0:17:39.13:0,39,963	0/0:32,0:32:72.25:0,72,1771	1/1:7,12:19:21.07:351,21,0	1/1:5,26:31:75.19:1188,75,0	1/1:5,24:29:64.54:1103,65,0	1/1:0,5:5:9.03:151,9,0
chr10	40922251	.	T	TA	7324.96	PASS	AB=0.647;AC=39;AF=0.722;AN=54;BaseQRankSum=-8.860;DP=501;FS=28.269;HRun=12;HaplotypeScore=50.8441;InbreedingCoeff=0.8873;MQ=70.43;MQ0=0;MQRankSum=0.054;QD=18.64;ReadPosRankSum=1.946;VQSLOD=4.0371;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,28:30:61.34:587,61,0	0/0:7,0:7:17.89:0,18,131	0/0:13,0:12:15.55:0,16,93	./.	1/1:5,16:21:20.93:334,21,0	0/0:24,0:24:56.62:0,57,414	0/0:15,0:15:38.75:0,39,282	1/1:6,20:27:44.69:462,45,0	1/1:3,4:7:12.02:117,12,0	1/1:6,16:23:45.09:453,45,0	1/1:5,16:23:19.66:430,20,0	0/0:16,0:16:29.72:0,30,213	1/1:4,11:15:29.94:277,30,0	1/1:1,8:9:21.03:204,21,0	1/1:3,11:14:33.44:340,33,0	1/1:1,4:5:12.02:116,12,0	1/1:5,24:32:50.20:579,50,0	1/1:5,26:31:57.08:550,57,0	1/1:2,16:18:45.03:424,45,0	1/1:5,13:18:33.79:292,34,0	1/1:3,7:10:18.03:175,18,0	0/1:5,6:11:28.96:97,0,29	0/0:15,0:18:32.32:0,32,234	0/0:11,0:11:29.81:0,30,217	1/1:1,31:32:60.08:686,60,0	1/1:10,15:25:26.14:398,26,0	1/1:1,18:19:17.15:328,17,0	1/1:2,18:23:51.55:477,52,0
chr10	40922491	.	CCAAAAAAAAAAAA	C	3207.32	PASS	AB=1.000;AC=18;AF=0.321;AN=56;BaseQRankSum=6.944;DP=335;FS=5.169;HRun=0;HaplotypeScore=114.0038;InbreedingCoeff=0.7447;MQ=80.80;MQ0=12;MQRankSum=-5.590;QD=32.73;ReadPosRankSum=6.369;VQSLOD=1.5097;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,0:19:44.48:731,44,0	0/0:1,0:1:2.98:0,3,22	0/0:46,0:18:47.24:0,47,897	0/0:35,0:13:35:0,35,413	1/1:0,15:15:21.37:620,21,0	0/0:10,0:10:30.09:0,30,1680	0/0:12,0:12:36.08:0,36,1702	0/0:16,0:16:10.94:0,11,507	1/1:6,0:9:12.26:241,12,0	0/1:8,0:8:9.73:10,0,160	0/1:8,0:8:2.34:2,0,208	0/0:5,0:5:15.02:0,15,381	1/1:1,0:8:9.03:193,9,0	1/1:4,1:5:15.02:297,15,0	0/0:6,0:5:17.06:0,17,256	1/1:0,6:6:12.04:459,12,0	1/1:0,17:19:24.03:764,24,0	0/0:17,0:16:5.07:0,5,409	0/0:7,0:6:15:0,15,213	0/0:15,0:15:41.99:0,42,511	0/0:9,0:9:24.82:0,25,197	1/1:0,0:1:3.01:81,3,0	0/0:8,0:8:24.04:0,24,847	0/0:5,0:5:8.99:0,9,75	0/0:10,0:10:9.32:0,9,223	0/0:10,0:10:27.06:0,27,457	0/0:14,0:14:41.55:0,42,490	0/0:11,0:10:16.58:0,17,276
chr10	40922589	.	CT	C	5419.65	PASS	AB=1.000;AC=26;AF=0.464;AN=56;BaseQRankSum=1.287;DP=447;FS=6.733;HRun=9;HaplotypeScore=55.3861;InbreedingCoeff=0.8970;MQ=70.22;MQ0=0;MQRankSum=1.199;QD=22.21;ReadPosRankSum=-0.721;VQSLOD=5.3798;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:2,0:29:65.49:0,65,343	0/0:1,0:13:19.92:0,20,101	0/1:9,0:6:0.54:1,0,33	0/1:10,0:9:3.80:4,0,60	0/0:17,0:17:42.08:0,42,470	0/0:0,0:10:28.41:0,28,144	0/0:4,0:26:45.64:0,46,249	1/1:4,17:21:47.93:417,48,0	0/0:13,0:13:33.06:0,33,365	1/1:3,27:30:84.03:765,84,0	1/1:2,19:21:57.03:522,57,0	0/0:12,0:12:33.10:0,33,381	0/0:12,0:12:30.09:0,30,346	0/0:16,0:16:39.12:0,39,449	1/1:0,10:10:21:192,21,0	0/0:11,0:11:27.08:0,27,312	0/0:25,0:25:69.19:0,69,785	1/1:1,35:36:98.98:891,99,0	1/1:0,8:8:24.01:220,24,0	1/1:1,22:23:66:597,66,0	1/1:2,4:6:9:82,9,0	0/0:0,0:6:17.04:0,17,87	0/0:7,0:7:18.02:0,18,190	0/0:6,0:6:18.05:0,18,207	1/1:1,21:22:57.03:522,57,0	1/1:1,16:17:48.03:439,48,0	1/1:2,19:21:54.03:494,54,0	1/1:0,10:10:30.02:275,30,0
chr10	40922855	.	CT	C	8444.63	PASS	AB=0.824;AC=41;AF=0.732;AN=56;BaseQRankSum=10.184;DP=581;FS=2.770;HRun=10;HaplotypeScore=69.6749;InbreedingCoeff=0.8763;MQ=77.10;MQ0=0;MQRankSum=-1.924;QD=19.28;ReadPosRankSum=2.999;VQSLOD=5.9027;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,40:47:64.80:865,65,0	0/0:7,0:7:21.06:0,21,232	0/1:11,3:13:19.78:20,0,218	0/0:13,0:13:25.99:0,26,229	1/1:6,13:19:32.96:286,33,0	0/0:21,0:21:51.12:0,51,550	0/0:33,3:36:12.05:0,12,795	1/1:4,16:20:50.78:430,51,0	1/1:4,15:19:20.98:183,21,0	1/1:5,17:22:50.96:437,51,0	1/1:0,9:9:20.27:181,20,0	0/0:27,0:27:72.10:0,72,762	1/1:3,18:22:56.02:474,56,0	1/1:0,18:18:47.98:416,48,0	1/1:1,12:13:29.99:260,30,0	1/1:3,16:19:49.34:419,49,0	1/1:1,37:38:98.98:858,99,0	1/1:9,36:46:99:923,109,0	1/1:3,11:14:32.92:275,33,0	1/1:1,6:7:17.08:154,17,0	1/1:3,29:33:77.02:657,77,0	1/1:1,5:6:15:130,15,0	0/0:8,0:9:17.88:0,18,180	0/0:27,3:30:6.02:0,6,725	1/1:4,18:22:26.49:392,26,0	1/1:2,17:19:44.96:387,45,0	1/1:0,19:19:47.99:417,48,0	1/1:1,11:12:32.95:279,33,0
chr10	40925172	.	GCAAA	G	2020.21	PASS	AB=0.968;AC=17;AF=0.304;AN=56;BaseQRankSum=8.309;DP=523;FS=10.372;HRun=0;HaplotypeScore=121.5389;InbreedingCoeff=-0.0566;MQ=75.15;MQ0=4;MQRankSum=-2.687;QD=6.78;ReadPosRankSum=9.708;VQSLOD=0.2144;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:54.11:0,54,807	0/0:7,0:7:21.06:0,21,415	0/0:25,0:16:46.70:0,47,459	0/0:23,0:15:23.81:0,24,197	0/1:16,1:17:79.62:143,0,80	0/0:14,0:14:39.10:0,39,746	0/0:20,0:20:51.13:0,51,1057	0/1:29,0:27:38.41:38,0,369	0/0:19,0:19:44.93:0,45,667	0/1:26,0:26:99:175,0,147	0/1:22,0:22:61.75:191,0,62	0/0:23,0:24:66.26:0,66,946	0/0:10,0:10:27.07:0,27,409	0/1:18,1:19:28.14:173,0,28	0/1:16,2:18:52.72:143,0,53	0/1:10,1:11:34.62:74,0,35	0/1:25,0:25:49.76:173,0,50	0/1:22,1:23:99:215,0,127	0/0:18,0:17:25.72:0,26,324	1/1:14,1:15:13.55:205,14,0	0/1:5,0:5:2.22:2,0,63	0/0:15,0:16:42.06:0,42,606	0/0:15,0:15:42.11:0,42,732	0/0:14,0:14:36.58:0,37,704	0/1:31,0:31:99:161,0,168	0/1:19,1:20:98.17:138,0,98	0/1:25,1:24:3.36:261,0,3	1/1:11,0:11:10.82:96,11,0
chr10	40925173	.	CAAAA	C	6142.84	PASS	AB=0.758;AC=30;AF=0.536;AN=56;BaseQRankSum=-3.930;DP=538;FS=1.304;HRun=17;HaplotypeScore=111.9907;InbreedingCoeff=0.8203;MQ=74.35;MQ0=5;MQRankSum=-1.073;QD=19.44;ReadPosRankSum=7.191;VQSLOD=2.8916;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:28:72.82:0,73,972	0/0:7,0:7:18.06:0,18,326	0/0:25,0:16:23.20:0,23,197	0/0:22,0:14:3.35:0,3,16	1/1:8,6:17:15.16:375,15,0	0/0:14,0:14:31.65:0,32,482	0/0:19,0:20:42.13:0,42,692	0/1:18,11:27:34.68:254,0,35	0/0:9,0:20:36.03:0,36,516	1/1:9,16:26:45.49:536,45,0	1/1:4,15:22:29.48:544,29,0	0/0:22,0:27:54.83:0,55,852	0/0:6,0:12:29.84:0,30,348	1/1:6,13:19:30.99:354,31,0	1/1:6,11:18:29.65:365,30,0	1/1:3,7:11:22.14:269,22,0	1/1:7,15:25:44.95:511,45,0	1/1:10,12:22:30.81:532,31,0	0/1:14,4:17:5.57:94,0,6	1/1:8,7:15:38.95:449,39,0	1/1:5,0:5:2.84:37,3,0	0/0:6,0:17:41.53:0,42,530	0/0:14,0:16:39.12:0,39,699	0/0:14,0:14:33.98:0,34,607	1/1:11,17:31:48.86:551,49,0	1/1:7,13:20:33.91:416,34,0	1/1:3,21:25:45.08:541,45,0	1/1:3,7:11:28.30:317,28,0
chr10	40925184	.	A	AAC	1072.04	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-3.712;DP=589;FS=0.567;HRun=0;HaplotypeScore=119.3091;InbreedingCoeff=0.8774;MQ=63.64;MQ0=10;MQRankSum=2.426;QD=24.36;ReadPosRankSum=1.523;VQSLOD=4.6058;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:87.28:0,87,714	1/1:0,0:9:17.88:140,18,0	0/0:24,0:14:25.64:0,26,225	0/0:26,0:13:2.47:0,2,45	0/0:24,0:23:51.46:0,51,429	1/1:2,11:14:32.98:450,33,0	1/1:2,17:20:45.09:623,45,0	0/0:28,0:25:49.49:0,49,433	0/0:20,0:20:43.55:0,44,389	0/0:26,0:26:63.73:0,64,520	0/0:24,0:24:49.86:0,50,406	0/0:25,0:25:23.04:0,23,319	0/0:17,0:16:42:0,42,376	0/0:20,0:20:4.26:0,4,261	0/0:18,0:18:35.80:0,36,278	0/0:15,0:15:38.92:0,39,317	0/0:28,0:27:54.56:0,55,436	0/0:22,0:22:56.22:0,56,438	0/0:20,0:17:33.75:0,34,372	0/0:22,0:22:59.83:0,60,499	0/0:8,0:8:11.84:0,12,101	0/0:18,0:18:47.39:0,47,404	0/0:20,0:20:41.64:0,42,369	0/0:13,0:13:28.38:0,28,294	0/0:29,0:29:63.19:0,63,493	0/0:24,0:23:64.08:0,64,521	0/0:31,0:29:65.46:0,65,515	0/0:13,0:13:35.92:0,36,298
chr10	40927747	.	GA	G	7203.92	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=12.114;DP=605;FS=3.319;HRun=1;HaplotypeScore=60.7878;InbreedingCoeff=0.9999;MQ=89.11;MQ0=0;MQRankSum=-2.007;QD=37.92;ReadPosRankSum=3.334;VQSLOD=5.5304;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,39:39:99:1425,102,0	0/0:13,0:13:39.11:0,39,588	0/0:20,0:20:57.66:0,58,873	0/0:26,1:27:70.73:0,71,1012	1/1:0,11:11:33.11:459,33,0	1/1:0,20:20:57.19:797,57,0	1/1:0,26:26:66.22:923,66,0	0/0:21,0:21:60.19:0,60,913	0/0:23,0:23:69.21:0,69,1051	0/0:15,0:15:45.15:0,45,719	0/0:11,0:10:33.10:0,33,504	0/0:19,0:19:54.18:0,54,863	0/0:24,0:24:69.23:0,69,1099	1/1:0,26:26:72.24:1007,72,0	0/0:25,0:25:75.24:0,75,1172	1/1:0,18:18:51.17:713,51,0	1/1:0,23:23:63.21:881,63,0	0/0:22,0:22:66.23:0,66,1055	0/0:18,0:18:54.17:0,54,838	0/0:16,0:16:42.13:0,42,648	0/0:33,0:33:96.31:0,96,1503	1/1:0,27:27:72.24:999,72,0	0/0:20,0:20:57.18:0,57,883	0/0:26,0:26:78.25:0,78,1217	0/0:12,0:12:36.12:0,36,575	0/0:32,0:32:96.33:0,96,1533	0/0:26,0:25:78.25:0,78,1220	0/0:12,0:12:36.12:0,36,572
chr10	40929006	.	CT	C	1578.83	PASS	AB=0.837;AC=15;AF=0.268;AN=56;BaseQRankSum=-1.811;DP=634;FS=1.948;HRun=14;HaplotypeScore=82.4993;InbreedingCoeff=0.7264;MQ=78.05;MQ0=3;MQRankSum=0.525;QD=7.45;ReadPosRankSum=6.302;VQSLOD=2.8935;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:16,31:47:66.16:442,66,0	1/1:3,7:10:14.83:103,15,0	0/0:33,0:24:11.46:0,11,86	0/0:20,0:15:4.67:0,5,51	1/1:8,11:19:5.48:161,5,0	0/0:12,0:20:37.34:0,37,218	0/0:8,0:22:31.68:0,32,186	0/0:27,0:30:40.64:0,41,241	0/0:32,1:33:44.87:0,45,512	0/0:9,0:28:54.75:0,55,327	0/0:5,0:14:22.10:0,22,128	0/0:23,1:24:27.39:0,27,369	0/0:17,1:18:38.94:0,39,330	1/1:10,13:24:43.41:286,43,0	0/1:6,1:23:9.92:10,0,46	0/1:8,11:19:2.91:105,0,3	1/1:5,20:26:55.49:376,55,0	0/0:6,0:20:23.42:0,23,159	0/0:7,0:10:17.51:0,18,120	0/0:6,0:18:37.95:0,38,240	0/0:8,0:26:34.25:0,34,186	1/1:7,13:21:42.46:278,42,0	0/0:22,0:23:28.67:0,29,390	0/0:30,0:30:60.03:0,60,542	0/0:7,0:21:19.89:0,20,116	0/1:9,1:21:2.18:2,0,142	0/0:5,0:21:20.15:0,20,114	0/0:4,0:10:5.68:0,6,29
chr10	40929359	.	CTGTG	C	444.58	PASS	AC=18;AF=0.391;AN=46;BaseQRankSum=4.945;DP=499;FS=9.957;HRun=0;HaplotypeScore=88.9211;InbreedingCoeff=0.6045;MQ=64.30;MQ0=13;MQRankSum=-1.857;QD=2.54;ReadPosRankSum=0.577;VQSLOD=0.9295;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:38,0:42:3.47:28,3,0	1/1:2,0:3:3:28,3,0	./.	./.	0/0:18,0:17:15.05:0,15,322	./.	1/1:31,0:30:1.55:4,2,0	0/0:31,0:30:1.25:0,1,3	1/1:11,0:16:15.02:139,15,0	0/0:18,0:19:6.49:0,6,117	0/0:10,0:10:3.01:0,3,43	0/0:12,0:12:11.84:0,12,210	1/1:11,0:11:5.91:43,6,0	0/0:12,0:13:8.77:0,9,152	0/0:14,0:14:3.01:0,3,42	0/0:7,0:10:5.75:0,6,82	0/0:18,0:21:23.55:0,24,300	0/0:16,0:18:6.23:0,6,83	./.	1/1:7,1:8:3.01:46,3,0	1/1:30,3:33:4.83:50,5,0	./.	0/0:15,0:14:15.05:0,15,332	0/0:28,0:29:29.84:0,30,631	0/0:20,0:17:6.01:0,6,95	0/0:13,0:13:4.26:0,4,66	1/1:10,3:14:11.84:165,12,0	1/1:11,3:13:6.02:92,6,0
chr10	40930971	.	TAC	T	275.28	PASS	AB=0.945;AC=16;AF=0.308;AN=52;BaseQRankSum=1.443;DP=616;FS=20.706;HRun=0;HaplotypeScore=123.8896;InbreedingCoeff=-0.1942;MQ=51.16;MQ0=23;MQRankSum=1.333;QD=0.76;ReadPosRankSum=2.559;VQSLOD=0.4547;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:37,4:39:33.04:33,0,57	0/1:4,0:5:9.53:14,0,10	./.	./.	0/0:28,0:28:11.99:0,12,170	0/0:18,0:18:16.13:0,16,284	0/0:29,0:27:29.82:0,30,313	0/0:31,0:30:18.37:0,18,156	1/1:14,8:16:12.03:132,12,0	0/1:27,0:27:42.58:60,0,43	0/0:22,0:19:3.75:0,4,50	0/1:25,0:25:6.71:7,0,174	0/1:10,5:15:12.79:68,0,13	0/0:18,0:18:14.90:0,15,160	0/1:33,0:32:0.16:0,0,24	0/0:13,0:13:14.99:0,15,183	0/1:25,0:24:11.48:11,0,268	0/0:13,0:12:1.77:0,2,4	0/1:18,0:17:24.30:24,0,60	0/1:28,0:28:3.42:3,0,279	0/1:40,1:40:7.92:8,0,359	0/0:22,0:22:17.93:0,18,97	0/0:12,0:12:9.03:0,9,118	0/0:35,0:33:35.51:0,36,595	0/1:19,0:17:3.77:4,0,50	0/1:21,1:21:19.48:19,0,252	0/1:23,1:23:4.55:5,0,315	0/1:16,1:16:29.35:29,0,179
chr10	40931009	.	C	CAG	834.30	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=4.083;DP=663;FS=1.894;HRun=0;HaplotypeScore=133.6681;InbreedingCoeff=0.7157;MQ=62.63;MQ0=20;MQRankSum=2.020;QD=6.23;ReadPosRankSum=-1.621;VQSLOD=3.3404;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:33:74.64:0,75,745	0/0:9,0:7:17.75:0,18,172	0/0:25,0:17:38.64:0,39,393	0/1:27,0:21:23.06:23,0,193	0/0:27,0:27:31.43:0,31,328	0/0:21,0:21:52.64:0,53,537	0/0:31,0:29:53.87:0,54,554	0/0:31,0:29:75.75:0,76,463	0/0:17,0:11:29.68:0,30,220	1/1:6,20:26:20.25:551,20,0	1/1:4,16:19:4.23:56,4,0	0/0:22,0:22:26.07:0,26,388	0/0:16,0:15:38.57:0,39,303	0/0:17,0:17:36.33:0,36,329	1/1:3,22:24:1.74:147,2,0	0/0:20,0:20:39:0,39,376	0/0:27,0:26:34.11:0,34,459	1/1:0,13:13:6.02:105,6,0	0/0:24,0:23:49.03:0,49,297	0/0:29,0:29:36.15:0,36,356	0/0:43,0:42:62.76:0,63,556	0/0:17,0:17:42.04:0,42,479	0/0:15,0:15:32.99:0,33,322	0/0:32,0:31:41.20:0,41,820	1/1:6,17:21:2.03:99,2,0	0/0:26,0:26:28:0,28,364	0/0:25,0:25:56.08:0,56,415	0/0:21,0:21:49.97:0,50,334
chr10	40931737	.	GT	G	4621.89	PASS	AB=0.955;AC=26;AF=0.464;AN=56;BaseQRankSum=10.367;DP=505;FS=11.341;HRun=10;HaplotypeScore=51.7865;InbreedingCoeff=0.8346;MQ=70.02;MQ0=6;MQRankSum=1.970;QD=17.78;ReadPosRankSum=0.873;VQSLOD=4.8108;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,2:41:41.16:0,41,900	0/0:10,0:10:27.06:0,27,291	0/1:15,0:13:10.94:11,0,83	0/0:21,0:13:9.02:0,9,100	0/0:21,0:21:50.60:0,51,513	0/0:11,0:11:18.05:0,18,199	0/0:9,0:9:21.06:0,21,232	1/1:5,24:28:71.89:612,72,0	0/0:11,1:12:0.99:0,1,214	1/1:7,19:26:53.96:466,54,0	1/1:2,8:10:23.95:201,24,0	0/0:18,0:18:36.09:0,36,388	0/0:14,0:14:30.08:0,30,332	0/0:14,0:14:35.88:0,36,363	1/1:1,11:12:26.90:225,27,0	0/0:16,0:16:42.09:0,42,447	0/0:29,2:31:55.16:0,55,828	1/1:4,16:22:42.90:333,43,0	1/1:0,16:16:47.97:411,48,0	1/1:0,16:16:47.96:410,48,0	1/1:8,6:13:14.98:130,15,0	0/0:10,0:10:27.07:0,27,298	0/0:17,0:17:42.10:0,42,456	0/1:9,1:10:5.02:5,0,158	1/1:2,23:25:59.98:521,60,0	1/1:3,17:20:50.97:438,51,0	1/1:6,23:28:62.98:547,63,0	1/1:2,14:16:35.97:312,36,0
chr10	40932478	.	GTAACGGC	G	9164.60	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=12.870;DP=558;FS=10.180;HRun=0;HaplotypeScore=155.8005;InbreedingCoeff=0.9941;MQ=83.67;MQ0=1;MQRankSum=-16.545;QD=56.22;ReadPosRankSum=2.493;VQSLOD=4.4032;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,22:26:54.19:1359,54,0	0/0:10,0:10:27.09:0,27,987	0/0:15,0:15:36.12:0,36,1354	0/0:24,0:24:69.20:0,69,2355	1/1:3,16:19:29.67:679,30,0	1/1:0,19:19:51.17:1258,51,0	1/1:4,25:29:72.25:1835,72,0	0/0:28,0:28:75.26:0,75,2900	0/0:20,0:20:51.17:0,51,2012	0/0:24,0:24:69.19:0,69,2465	0/0:10,0:10:27.09:0,27,1065	0/0:20,0:20:54.19:0,54,2134	0/0:23,0:23:66.23:0,66,2578	1/1:1,15:16:36.12:909,36,0	0/0:13,0:13:36.12:0,36,1426	1/1:0,12:12:30.10:756,30,0	1/1:2,23:25:60.21:1495,60,0	0/0:25,0:25:72.25:0,72,2852	0/0:20,0:20:54.19:0,54,1952	0/0:14,0:14:33.11:0,33,1272	0/0:45,0:45:99:0,129,5025	1/1:2,15:17:39.13:874,39,0	0/0:17,0:17:51.18:0,51,1969	0/0:32,0:31:87.28:0,87,3343	0/0:18,0:18:54.19:0,54,2012	0/0:23,0:23:66.23:0,66,2522	0/0:10,0:10:27.09:0,27,1002	0/0:4,0:4:12.04:0,12,447
chr10	40932869	.	T	TA	10252.01	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-13.321;DP=556;FS=8.958;HRun=1;HaplotypeScore=54.4810;InbreedingCoeff=0.9992;MQ=79.95;MQ0=0;MQRankSum=0.351;QD=41.34;ReadPosRankSum=0.771;VQSLOD=4.9571;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:63.14:0,63,822	0/0:10,0:10:30.10:0,30,417	0/0:20,0:20:22.81:0,23,490	0/0:13,0:13:25.88:0,26,344	0/0:31,0:30:87.26:0,87,1177	0/0:26,0:26:75.22:0,75,1009	0/0:19,0:19:54.11:0,54,681	1/1:1,27:28:81.22:1174,81,0	0/0:15,0:15:45.12:0,45,593	1/1:0,25:25:75.18:1102,75,0	1/1:0,16:16:42.14:665,42,0	0/0:11,0:11:33.09:0,33,430	0/0:16,0:16:48.16:0,48,667	0/0:14,0:14:42.14:0,42,587	1/1:1,14:15:33.11:527,33,0	0/0:13,0:13:39.12:0,39,530	0/0:29,0:29:84.28:0,84,1171	1/1:0,17:17:45.15:718,45,0	1/1:0,15:15:45.11:639,45,0	1/1:0,23:23:63.21:1006,63,0	1/1:0,11:11:33.11:527,33,0	0/0:31,0:31:84.26:0,84,1149	0/0:18,0:18:51.17:0,51,710	0/0:20,0:20:60.20:0,60,836	1/1:2,28:30:66.23:1054,66,0	1/1:0,18:18:54.16:830,54,0	1/1:1,28:29:63.21:1005,63,0	1/1:0,21:21:63.21:1006,63,0
chr10	40934044	.	C	CA	557.95	PASS	AB=0.986;AC=5;AF=0.089;AN=56;BaseQRankSum=-1.729;DP=577;FS=1.671;HRun=6;HaplotypeScore=68.3608;InbreedingCoeff=0.8116;MQ=76.65;MQ0=13;MQRankSum=-0.353;QD=5.36;ReadPosRankSum=-1.080;VQSLOD=-0.5254;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,18:24:36.12:454,36,0	0/0:4,0:4:9.02:0,9,92	0/0:79,1:35:43.55:0,44,492	0/1:71,1:33:2.41:2,0,234	0/0:19,0:19:51.11:0,51,518	0/0:17,0:17:47.12:0,47,457	0/0:14,0:14:36.06:0,36,360	0/0:29,0:29:78.11:0,78,759	0/0:18,0:18:54.12:0,54,550	0/0:28,0:28:78.15:0,78,781	0/0:13,0:13:33.07:0,33,336	0/0:11,0:11:33.07:0,33,336	0/0:10,0:10:21.02:0,21,201	0/0:9,0:9:24.04:0,24,239	0/0:12,0:12:36.06:0,36,359	0/0:9,0:9:27.05:0,27,269	0/0:33,0:33:88.43:0,88,889	0/0:34,0:33:96.13:0,96,952	0/0:12,0:11:18.03:0,18,183	0/0:14,0:14:39.01:0,39,369	0/0:10,0:10:30.06:0,30,300	1/1:2,6:8:18.06:223,18,0	0/0:11,0:11:30.06:0,30,305	0/0:14,0:14:39:0,39,383	0/0:18,0:18:51.12:0,51,520	0/0:23,0:23:60.12:0,60,606	0/0:26,0:26:78.15:0,78,781	0/0:5,0:5:15.03:0,15,153
chr10	40935221	.	C	CATTT	12381.54	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-12.084;DP=578;FS=21.224;HRun=0;HaplotypeScore=79.6730;InbreedingCoeff=0.9940;MQ=73.44;MQ0=0;MQRankSum=-0.546;QD=40.86;ReadPosRankSum=-1.810;VQSLOD=2.7050;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:42.12:0,42,664	0/0:6,0:6:15.05:0,15,256	0/0:22,0:21:32.46:0,32,646	0/0:12,0:12:18.76:0,19,202	0/0:37,0:37:99:0,102,1658	0/0:20,0:20:45.14:0,45,724	0/0:11,0:11:30.09:0,30,477	1/1:17,22:42:84.26:1669,84,0	0/0:21,0:21:48.14:0,48,754	1/1:3,17:20:51.15:1096,51,0	1/1:6,16:22:47.95:856,48,0	0/0:12,0:12:27.08:0,27,421	0/0:14,0:14:39.13:0,39,638	0/0:11,0:11:27.09:0,27,448	1/1:4,17:21:27.09:572,27,0	0/0:24,0:24:57.19:0,57,965	0/0:16,0:16:39.11:0,39,636	1/1:3,16:19:42.14:1052,42,0	1/1:10,13:23:45.13:1001,45,0	1/1:6,25:33:78.06:1562,78,0	1/1:4,10:14:18.06:452,18,0	0/0:16,0:16:42.10:0,42,673	0/0:16,0:16:36.12:0,36,598	0/0:15,0:15:39.13:0,39,660	1/1:4,23:27:42.14:983,42,0	1/1:4,23:31:81.24:1717,81,0	1/1:7,23:31:42.10:971,42,0	1/1:5,15:20:18.06:451,18,0
chr10	40935685	.	A	AGTGTGT	6297.41	PASS	AB=0.839;AC=36;AF=0.667;AN=54;BaseQRankSum=2.128;DP=732;FS=6.321;HRun=0;HaplotypeScore=187.9193;InbreedingCoeff=0.4300;MQ=66.06;MQ0=8;MQRankSum=-4.988;QD=12.06;ReadPosRankSum=-3.342;VQSLOD=2.8302;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:30,15:50:50.25:146,0,50	0/1:8,0:14:45.79:140,0,46	./.	0/0:40,0:28:1.66:0,2,11	1/1:26,0:25:15.03:264,15,0	0/1:9,11:23:45.16:371,0,45	1/1:21,0:23:17.14:269,17,0	1/1:32,0:32:26.94:303,27,0	0/0:21,0:21:10.91:0,11,438	1/1:34,0:34:33.02:519,33,0	0/1:18,0:19:32.78:136,0,33	0/0:23,0:27:21.28:0,21,473	0/0:22,0:25:38.50:0,39,652	1/1:7,10:19:18.06:523,18,0	1/1:22,0:22:11.72:241,12,0	1/1:7,11:20:20.98:517,21,0	1/1:10,8:21:8.18:267,8,0	0/1:22,0:22:32.07:299,0,32	1/1:25,0:25:11.07:203,11,0	1/1:21,0:21:9.03:217,9,0	1/1:37,0:37:5.34:40,5,0	1/1:19,1:22:23.50:321,23,0	0/0:20,0:27:44.39:0,44,642	0/0:34,0:35:59.90:0,60,1029	1/1:17,0:17:15.05:376,15,0	1/1:27,0:26:32.95:472,33,0	1/1:25,0:24:24.08:538,24,0	0/1:23,0:23:1.90:136,0,2
chr10	40935688	.	G	GTGTGTGTA	9562.86	PASS	AB=0.954;AC=31;AF=0.554;AN=56;BaseQRankSum=-3.209;DP=798;FS=5.021;HRun=0;HaplotypeScore=222.0302;InbreedingCoeff=0.1749;MQ=62.53;MQ0=11;MQRankSum=-2.769;QD=16.32;ReadPosRankSum=-2.856;VQSLOD=3.2526;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:49,0:49:81.93:82,0,276	0/1:13,0:13:33.84:34,0,154	0/0:33,0:18:32.22:0,32,358	0/0:41,0:26:43.86:0,44,451	0/1:25,0:24:99:138,0,160	0/1:21,0:21:99:191,0,148	0/1:21,0:21:52.99:53,0,163	1/1:36,0:36:78.87:1035,79,0	0/0:21,0:21:47.86:0,48,820	1/1:8,27:46:98.07:1820,98,0	0/1:6,15:24:31.46:249,0,31	0/0:29,0:29:77.63:0,78,1134	0/0:26,0:26:55.52:0,56,1093	0/1:20,0:20:84.86:245,0,85	1/1:2,20:30:12.04:420,12,0	0/1:23,0:23:99:305,0,106	0/1:23,0:23:99:101,0,152	0/1:22,2:24:23.39:673,0,23	1/1:6,18:31:55.02:839,55,0	1/1:4,17:31:9.03:387,9,0	1/1:36,1:37:6.12:88,6,0	0/1:23,0:23:77.65:87,0,78	0/0:26,0:26:62.98:0,63,1108	0/0:36,0:36:80.28:0,80,1568	1/1:3,16:23:15.05:587,15,0	1/1:4,22:32:80.06:1213,80,0	1/1:10,13:26:24.08:790,24,0	1/1:7,15:26:11.90:227,12,0
chr10	40935690	.	G	GTGTGTA	7792.74	PASS	AB=0.997;AC=30;AF=0.536;AN=56;BaseQRankSum=-0.516;DP=793;FS=2.615;HRun=0;HaplotypeScore=210.0981;InbreedingCoeff=0.0870;MQ=61.24;MQ0=11;MQRankSum=-2.704;QD=13.37;ReadPosRankSum=-0.143;VQSLOD=4.2561;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:48,0:48:99:113,0,266	0/1:12,0:12:76.61:77,0,140	0/0:31,0:16:32.22:0,32,358	0/0:40,0:23:43.78:0,44,451	0/1:25,0:24:99:141,0,149	0/1:22,0:22:99:286,0,144	0/1:22,0:22:99:102,0,171	1/1:36,0:36:38.41:786,38,0	0/0:21,0:21:52.33:0,52,768	1/1:46,0:46:79.59:1310,80,0	0/1:22,1:23:14.97:179,0,15	0/0:29,0:29:77.78:0,78,973	0/0:26,0:26:65.10:0,65,988	0/1:20,0:20:99:395,0,104	1/1:31,0:31:11.97:296,12,0	0/1:23,0:23:99:421,0,126	0/1:24,0:24:99:182,0,141	0/1:25,0:25:44.09:488,0,44	1/1:28,0:28:24.89:523,25,0	0/1:30,0:30:11.90:237,0,12	1/1:15,22:39:1.08:4,1,0	0/1:23,0:23:98.80:122,0,99	0/0:26,0:26:62.98:0,63,976	0/0:37,0:37:83.95:0,84,1438	1/1:21,1:22:15.05:437,15,0	1/1:29,2:30:17.03:942,17,0	1/1:27,1:27:3.14:584,3,0	1/1:24,1:25:11.52:168,12,0
chr10	40935694	.	G	GTA	2481.18	PASS	AB=0.966;AC=18;AF=0.321;AN=56;BaseQRankSum=6.457;DP=784;FS=3.842;HRun=0;HaplotypeScore=156.3187;InbreedingCoeff=-0.2487;MQ=57.90;MQ0=12;MQRankSum=-0.874;QD=5.27;ReadPosRankSum=3.431;VQSLOD=3.0881;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:50,0:50:8.90:9,0,299	0/0:13,0:13:13.86:0,14,161	0/0:31,0:16:38.22:0,38,422	0/0:38,0:21:50.94:0,51,506	0/0:25,0:24:31.65:0,32,262	0/1:24,0:24:23.08:23,0,113	0/0:21,0:21:8.30:0,8,218	0/1:12,26:37:20.10:555,0,20	0/0:23,0:23:47.99:0,48,599	0/1:43,0:44:78.20:494,0,78	0/1:20,0:20:7.21:80,0,7	0/0:33,0:33:86.72:0,87,906	0/0:26,0:26:21.77:0,22,691	0/1:20,0:20:22.90:23,0,110	0/1:31,0:31:30.86:109,0,31	0/1:23,0:23:3.73:4,0,140	0/1:24,0:24:1.03:1,0,149	0/1:27,0:27:99:194,0,129	0/1:25,0:25:99:235,0,126	0/1:27,0:27:51.08:83,0,51	0/0:36,2:38:4.25:0,4,45	0/1:23,0:23:12.87:13,0,152	0/0:27,0:27:63.02:0,63,729	0/0:38,0:38:84.02:0,84,1031	1/1:20,0:20:15.03:156,15,0	0/1:30,0:29:84.57:385,0,85	0/1:24,1:25:34.37:181,0,34	0/1:18,1:19:6.01:96,0,6
chr10	40936886	.	T	TA	376.36	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-3.162;DP=610;FS=2.097;HRun=7;HaplotypeScore=100.4591;InbreedingCoeff=0.9931;MQ=87.61;MQ0=0;MQRankSum=0.713;QD=22.14;ReadPosRankSum=1.612;VQSLOD=3.2283;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:63.09:0,63,608	1/1:2,15:17:39.12:471,39,0	0/0:24,0:24:43.37:0,43,456	0/0:23,0:23:27.57:0,28,351	0/0:37,0:37:99:0,102,982	0/0:21,0:21:39.07:0,39,382	0/0:16,0:16:24.04:0,24,232	0/0:24,0:24:57.08:0,57,550	0/0:21,0:21:57.07:0,57,544	0/0:26,0:26:66.10:0,66,663	0/0:15,0:15:39.06:0,39,377	0/0:14,0:14:42.07:0,42,405	0/0:9,0:9:24.04:0,24,232	0/0:10,0:10:27.03:0,27,255	0/0:14,0:14:30.05:0,30,290	0/0:26,0:26:72.11:0,72,695	0/0:34,0:34:93.14:0,93,897	0/0:19,0:19:48.07:0,48,463	0/0:23,0:23:51.07:0,51,490	0/0:22,0:22:60.09:0,60,578	0/0:16,0:16:45.07:0,45,433	0/0:23,0:23:63.10:0,63,608	0/0:24,0:24:66.06:0,66,620	0/0:18,0:18:51.07:0,51,490	0/0:24,0:24:66.10:0,66,637	0/0:26,0:26:69.11:0,69,666	0/0:35,0:35:63.46:0,63,609	0/0:19,0:19:36.06:0,36,347
chr10	40936935	.	G	GGTGTGTGT	5326.14	PASS	AB=0.938;AC=32;AF=0.571;AN=56;BaseQRankSum=0.019;DP=600;FS=36.532;HRun=0;HaplotypeScore=172.2223;InbreedingCoeff=0.6203;MQ=63.72;MQ0=5;MQRankSum=-5.193;QD=15.00;ReadPosRankSum=-5.182;VQSLOD=0.4241;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,7:25:2.14:211,2,0	0/1:4,0:6:63.39:92,0,63	0/0:33,0:19:50.47:0,50,792	0/0:28,0:20:56.80:0,57,838	0/1:35,0:36:78.18:78,0,469	0/0:20,0:20:21:0,21,304	0/0:23,0:24:17.23:0,17,462	1/1:21,0:27:34.58:564,35,0	0/0:23,0:23:66.18:0,66,1427	1/1:10,19:32:6.53:509,7,0	1/1:2,0:8:3.01:69,3,0	0/0:14,0:14:42.12:0,42,932	0/0:16,0:16:45.14:0,45,982	0/1:11,0:11:2.90:3,0,328	1/1:6,0:13:17.54:623,18,0	0/1:23,0:23:28.89:29,0,544	0/0:41,0:44:36.28:0,36,1155	1/1:14,1:18:15.67:237,16,0	1/1:18,0:22:39.92:639,40,0	1/1:3,2:7:9.03:317,9,0	1/1:19,0:25:32.95:454,33,0	1/1:13,0:16:16.97:314,17,0	0/0:23,0:22:63.17:0,63,1322	0/0:19,0:19:45.13:0,45,991	1/1:7,0:11:11.49:325,11,0	1/1:16,0:18:23.52:373,24,0	1/1:13,16:31:3.86:243,4,0	1/1:6,8:22:6.96:246,7,0
chr10	40936936	.	GTA	G	4173.75	PASS	AB=0.970;AC=29;AF=0.518;AN=56;BaseQRankSum=-4.371;DP=592;FS=0.819;HRun=0;HaplotypeScore=102.3041;InbreedingCoeff=0.4583;MQ=63.70;MQ0=5;MQRankSum=0.654;QD=10.08;ReadPosRankSum=-3.390;VQSLOD=2.4987;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:24:3.76:14,0,4	0/0:6,0:6:8.70:0,9,61	0/0:33,0:19:13.41:0,13,504	0/0:29,0:20:59.32:0,59,607	0/1:35,2:37:99:391,0,103	1/1:3,17:20:21.05:298,21,0	1/1:2,22:24:29.86:435,30,0	1/1:27,0:27:47.85:396,48,0	0/0:23,0:23:66.12:0,66,1038	1/1:28,0:28:40.11:338,40,0	0/0:7,0:7:0.23:0,0,6	0/0:14,0:14:41.29:0,41,625	0/0:16,0:16:24.66:0,25,560	0/1:10,0:10:45.97:46,0,109	0/1:14,0:13:18.11:52,0,18	0/1:20,2:22:99:254,0,183	0/1:43,4:47:99:459,0,276	1/1:18,0:18:40.68:271,41,0	1/1:21,0:21:44.06:338,44,0	0/0:8,0:7:4.53:0,5,18	1/1:26,0:26:26.98:196,27,0	1/1:16,0:16:19.40:166,19,0	0/0:23,0:22:63.10:0,63,942	0/0:19,0:19:27.26:0,27,613	1/1:11,0:11:12.17:142,12,0	1/1:19,0:18:19.96:206,20,0	1/1:29,0:28:11.18:156,11,0	0/1:21,0:21:7.89:16,0,8
chr10	40937275	.	A	ACT	2326.72	PASS	AB=0.980;AC=27;AF=0.519;AN=52;BaseQRankSum=8.592;DP=448;FS=42.212;HRun=0;HaplotypeScore=147.6665;InbreedingCoeff=0.2342;MQ=67.23;MQ0=6;MQRankSum=-7.660;QD=7.94;ReadPosRankSum=2.537;VQSLOD=1.7083;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:17,1:17:19.10:103,19,0	1/1:2,0:2:6.02:92,6,0	0/0:25,0:18:26.93:0,27,611	0/0:28,0:20:54.13:0,54,739	1/1:13,0:13:2.84:14,3,0	0/1:17,1:18:18.73:112,0,19	1/1:22,0:21:7.63:43,8,0	0/1:28,0:28:99:309,0,243	0/0:17,0:18:48.16:0,48,699	1/1:23,1:22:33.22:352,33,0	./.	0/0:15,0:15:38.81:0,39,515	0/0:13,0:12:23.26:0,23,314	1/1:17,0:15:11.10:181,11,0	0/1:29,0:29:52.92:119,0,53	0/1:27,0:26:99:235,0,116	0/1:13,0:15:99:115,0,109	0/0:8,0:9:1.34:0,1,92	0/1:9,0:8:63.28:63,0,71	1/1:9,1:10:14.90:159,15,0	1/1:24,1:17:9:98,9,0	0/1:6,1:7:0:0,0,0	0/0:12,0:12:33.11:0,33,483	0/0:24,0:25:53.59:0,54,773	./.	0/1:15,0:15:13.13:401,0,13	0/1:12,0:12:91.60:92,0,97	1/1:1,0:1:2.88:15,3,0
chr10	40937277	.	TACCA	T	5996.32	PASS	AB=0.646;AC=23;AF=0.442;AN=52;BaseQRankSum=8.291;DP=437;FS=20.000;HRun=0;HaplotypeScore=136.1387;InbreedingCoeff=-0.1165;MQ=64.13;MQ0=14;MQRankSum=-7.750;QD=20.89;ReadPosRankSum=3.798;VQSLOD=3.3486;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:6,9:14:12.67:414,0,13	1/1:2,0:2:5.97:71,6,0	0/0:27,0:18:50.83:0,51,1146	0/0:27,0:18:54.15:0,54,1156	1/1:4,8:12:4.90:68,5,0	0/1:6,13:19:60.61:473,0,61	0/1:12,9:20:99:278,0,190	0/1:15,11:25:99:590,0,542	0/0:18,0:18:48.13:0,48,1289	0/1:9,15:22:27.02:601,0,27	./.	0/0:15,0:15:38.91:0,39,916	0/0:13,0:12:21.62:0,22,566	0/1:8,9:15:51.35:450,0,51	0/1:15,14:28:99:566,0,303	0/1:8,18:24:99:972,0,262	0/1:8,5:13:99:170,0,241	0/1:4,4:8:62.12:62,0,160	0/1:4,4:7:99:191,0,236	1/1:8,2:9:14.91:184,15,0	1/1:25,3:17:8.18:70,8,0	0/0:6,0:6:2.70:0,3,82	0/0:11,0:11:33.11:0,33,917	0/0:24,0:24:59.65:0,60,1607	./.	0/1:4,9:12:72.03:370,0,72	0/1:4,7:11:99:403,0,224	1/1:1,1:1:3.01:63,3,0
chr10	40937286	.	CATT	C	177.60	PASS	AB=0.990;AC=12;AF=0.240;AN=50;BaseQRankSum=9.261;DP=401;FS=14.228;HRun=0;HaplotypeScore=162.9877;InbreedingCoeff=-0.1624;MQ=51.24;MQ0=22;MQRankSum=-5.414;QD=1.03;ReadPosRankSum=2.638;VQSLOD=1.5560;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:14,0:14:11.38:11,0,73	./.	0/0:23,0:14:33.11:0,33,633	0/0:23,0:12:20.47:0,20,437	0/0:9,0:9:5.52:0,6,28	0/1:18,0:18:3.55:4,0,37	0/1:21,0:18:33.39:33,0,233	0/1:25,3:26:99:102,0,316	0/0:17,0:17:43.03:0,43,663	0/0:20,0:19:5.62:0,6,101	./.	0/1:15,0:14:2.73:3,0,421	0/0:13,0:10:8.99:0,9,112	0/1:19,0:16:55.05:55,0,64	0/0:28,0:27:14.74:0,15,209	0/1:26,0:24:43.55:44,0,191	0/0:15,0:15:10.72:0,11,121	0/0:9,0:8:7.89:0,8,60	0/0:10,0:7:4.05:0,4,126	1/1:5,1:4:1.72:5,2,0	0/0:26,1:13:2.03:0,2,5	0/0:4,0:4:2.92:0,3,49	0/0:8,0:8:24.07:0,24,415	0/0:23,0:21:52.20:0,52,852	./.	0/1:11,0:10:24.25:24,0,95	0/1:11,0:11:20.34:20,0,121	0/1:3,0:2:1.63:2,0,6
chr10	40937312	.	C	CAAT	1482.80	PASS	AB=0.965;AC=17;AF=0.304;AN=56;BaseQRankSum=10.824;DP=443;FS=39.272;HRun=0;HaplotypeScore=141.0324;InbreedingCoeff=-0.3687;MQ=29.35;MQ0=61;MQRankSum=-4.877;QD=5.10;ReadPosRankSum=3.943;VQSLOD=0.9111;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:16,1:11:64.09:114,0,64	0/0:4,0:4:12:0,12,125	1/1:4,0:1:2.74:12,3,0	0/0:11,0:1:3:0,3,26	0/1:10,0:9:8.67:9,0,78	0/1:22,0:17:99:106,0,126	0/1:35,0:22:48.61:49,0,232	0/1:23,0:20:99:112,0,267	0/0:13,0:13:36.10:0,36,498	0/1:21,0:19:73.10:73,0,372	0/0:4,0:3:4.23:0,4,26	0/0:12,0:9:20.89:0,21,274	0/0:12,0:8:11.33:0,11,146	0/1:17,1:18:99:181,0,288	0/1:28,0:27:99:163,0,173	0/1:23,4:25:99:426,0,242	0/1:20,0:17:19.17:19,0,90	0/0:8,0:6:12.85:0,13,119	0/1:16,0:13:69.52:70,0,201	0/1:6,1:5:28.80:50,0,29	0/0:45,0:22:6.34:0,6,88	0/0:6,0:4:5.98:0,6,45	0/0:3,0:3:8.99:0,9,131	0/0:27,0:22:47.74:0,48,725	0/0:7,0:5:5.95:0,6,57	0/1:20,0:16:76.29:76,0,263	0/1:13,2:15:99:142,0,153	0/1:7,0:4:34.23:34,0,78
chr10	40937366	.	C	CCAT	4006.24	PASS	AB=0.934;AC=19;AF=0.352;AN=54;BaseQRankSum=0.281;DP=832;FS=2.419;HRun=0;HaplotypeScore=111.8421;InbreedingCoeff=-0.2597;MQ=24.09;MQ0=297;MQRankSum=-5.397;QD=8.03;ReadPosRankSum=-2.844;VQSLOD=2.2126;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:30,7:17:98.94:404,0,99	0/1:10,0:7:31.68:32,0,124	./.	0/0:11,0:2:5.09:0,5,19	0/1:13,0:8:41.30:41,0,84	0/1:24,4:19:99:252,0,161	0/0:66,0:16:14.46:0,14,214	1/1:29,0:5:8.99:141,9,0	0/0:32,0:23:48.16:0,48,741	0/1:63,0:26:52.06:468,0,52	0/1:26,0:15:47.88:48,0,83	0/0:34,0:25:52.43:0,52,681	0/0:38,0:28:54.37:0,54,759	0/1:33,4:24:99:224,0,355	0/1:49,0:38:55.09:55,0,596	0/1:31,10:29:99:606,0,487	0/1:24,8:25:99:439,0,150	0/0:18,0:8:12.04:0,12,185	0/1:16,0:5:6.03:6,0,84	1/1:25,1:18:14.90:182,15,0	0/0:61,0:31:15.81:0,16,142	0/0:25,0:12:8.83:0,9,131	0/0:9,0:4:3.01:0,3,46	0/0:35,0:25:47.48:0,47,743	0/1:31,1:18:99:119,0,111	0/1:35,0:15:13.33:478,0,13	0/1:12,0:9:47.95:48,0,170	0/1:10,3:11:99:463,0,106
chr10	40937369	.	TCATCAC	T	3464.94	PASS	AB=0.904;AC=18;AF=0.333;AN=54;BaseQRankSum=-0.228;DP=819;FS=3.154;HRun=0;HaplotypeScore=123.1258;InbreedingCoeff=-0.3358;MQ=24.10;MQ0=294;MQRankSum=-6.195;QD=7.04;ReadPosRankSum=-0.582;VQSLOD=2.2827;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:36,1:17:99:403,0,114	0/1:8,2:7:99:111,0,124	./.	0/0:9,0:2:3.84:0,4,13	0/1:12,1:8:16.31:16,0,100	0/1:24,4:19:99:252,0,241	0/0:64,1:17:25.83:0,26,331	1/1:29,1:5:8.99:140,9,0	0/0:31,0:22:48.16:0,48,841	0/1:56,6:26:53.82:515,0,54	0/1:17,9:15:45.46:45,0,84	0/0:34,0:25:59.44:0,59,894	0/0:38,0:28:53.51:0,54,793	0/1:37,0:24:99:105,0,398	0/1:46,1:36:58.63:59,0,737	0/1:40,1:29:99:370,0,569	0/1:32,0:25:99:275,0,172	0/0:18,0:8:12.04:0,12,223	0/1:15,0:5:20.32:20,0,129	0/1:19,6:18:3.23:162,0,3	0/0:60,0:29:17.42:0,17,187	0/0:23,1:11:12.03:0,12,150	0/0:9,0:4:3.01:0,3,46	0/0:36,0:26:51.97:0,52,869	0/1:26,6:18:99:153,0,142	0/1:27,5:13:13.18:484,0,13	0/1:11,1:9:47.94:48,0,204	0/1:10,3:11:99:306,0,198
chr10	40937378	.	TCATCAC	T	1853.06	PASS	AB=0.973;AC=16;AF=0.296;AN=54;BaseQRankSum=4.128;DP=752;FS=4.450;HRun=0;HaplotypeScore=123.0328;InbreedingCoeff=-0.1206;MQ=24.28;MQ0=274;MQRankSum=-5.457;QD=4.70;ReadPosRankSum=-0.671;VQSLOD=2.2518;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:34,0:17:99:225,0,113	0/1:9,0:7:31.31:31,0,124	./.	0/0:5,0:2:0:0,0,0	0/0:12,0:8:12.01:0,12,159	0/1:25,0:18:99:123,0,232	0/0:59,0:13:22.84:0,23,277	1/1:27,0:2:6.02:72,6,0	0/0:32,0:22:48.16:0,48,836	0/1:54,0:21:89.94:424,0,90	0/1:23,0:13:45.50:46,0,58	0/0:34,0:26:57.14:0,57,927	0/0:39,0:29:50.29:0,50,777	0/0:32,0:18:3.66:0,4,415	0/1:43,0:34:24.15:24,0,750	0/1:40,0:28:44.44:44,0,647	0/1:29,0:23:99:124,0,255	0/0:17,0:8:12.04:0,12,222	0/0:12,0:4:6.02:0,6,133	0/1:19,6:20:6.35:91,0,6	0/0:53,0:26:11.05:0,11,164	0/0:19,0:9:13.99:0,14,136	0/0:8,0:4:3.01:0,3,45	0/0:35,0:26:51.92:0,52,852	0/1:27,0:16:58.67:59,0,112	1/1:30,1:13:10.68:479,11,0	0/1:12,0:9:9.82:10,0,204	0/1:11,2:11:99:257,0,188
chr10	40937387	.	TCATCAC	T	837.07	PASS	AB=0.990;AC=10;AF=0.192;AN=52;BaseQRankSum=5.587;DP=729;FS=11.522;HRun=0;HaplotypeScore=132.2080;InbreedingCoeff=-0.0861;MQ=24.40;MQ0=269;MQRankSum=-6.100;QD=3.28;ReadPosRankSum=-0.912;VQSLOD=1.8904;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:31,0:15:80.31:80,0,141	0/0:8,1:7:14.75:0,15,167	./.	./.	0/0:13,0:8:11.97:0,12,138	0/1:23,0:17:7.65:8,0,204	0/0:54,0:12:18.05:0,18,242	0/0:30,0:2:1.25:0,1,3	0/0:33,0:23:50.93:0,51,762	0/1:51,2:20:99:303,0,202	0/1:24,0:16:42.18:48,0,42	0/0:32,0:24:59.01:0,59,935	0/0:38,0:28:49.04:0,49,725	0/0:30,0:16:28.86:0,29,485	0/0:44,0:33:40.91:0,41,748	0/0:39,0:27:62.05:0,62,945	0/1:27,0:22:50.21:50,0,395	0/0:17,0:8:11.96:0,12,160	0/0:12,0:3:3.01:0,3,91	0/1:23,1:20:19.39:29,0,19	0/0:43,0:23:11.93:0,12,150	0/0:20,0:9:9.03:0,9,133	0/0:9,0:4:2.92:0,3,17	0/0:36,0:26:47.89:0,48,689	0/1:30,0:19:37.62:38,0,236	1/1:27,2:12:2.21:319,2,0	0/0:12,0:9:7.96:0,8,189	0/1:14,0:12:96.62:97,0,205
chr10	40938296	.	TA	T	6477.45	PASS	AB=1.000;AC=27;AF=0.482;AN=56;BaseQRankSum=-6.870;DP=410;FS=8.800;HRun=4;HaplotypeScore=54.0979;InbreedingCoeff=0.7746;MQ=59.12;MQ0=5;MQRankSum=-3.130;QD=27.22;ReadPosRankSum=0.084;VQSLOD=3.3671;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:28.01:0,28,226	0/0:4,0:4:8.99:0,9,87	0/0:10,0:6:12.01:0,12,119	0/0:6,0:6:13.30:0,13,123	0/0:16,0:15:30.12:0,30,130	0/0:15,0:15:35.49:0,35,170	0/1:6,0:5:8.59:9,0,26	1/1:0,25:25:75.10:845,75,0	0/0:16,0:16:48.15:0,48,634	1/1:1,13:14:36.10:420,36,0	1/1:2,18:20:48.15:567,48,0	0/0:11,0:11:30.08:0,30,381	0/0:13,0:13:36.08:0,36,465	0/0:13,0:13:29.36:0,29,136	1/1:1,10:11:27.08:320,27,0	0/1:8,0:8:12.56:13,0,44	0/0:24,0:23:43.88:0,44,236	1/1:2,19:20:48.60:560,49,0	1/1:1,13:14:36.07:413,36,0	1/1:4,29:32:81.21:949,81,0	1/1:0,8:8:21.06:250,21,0	0/0:2,0:2:2.92:0,3,17	0/0:9,0:9:27.09:0,27,362	0/1:8,0:8:5.03:5,0,243	1/1:1,21:22:57.17:680,57,0	1/1:3,20:22:54.11:626,54,0	1/1:1,13:14:39.12:464,39,0	1/1:1,10:11:30.09:357,30,0
chr10	40938682	.	C	CTTCCT	6805.22	PASS	AB=0.938;AC=49;AF=0.980;AN=50;BaseQRankSum=-1.732;DP=723;FS=3.259;HRun=0;HaplotypeScore=134.9247;InbreedingCoeff=-0.0737;MQ=58.98;MQ0=1;MQRankSum=0.642;QD=10.41;ReadPosRankSum=1.283;VQSLOD=4.1852;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:19:21.07:458,21,0	1/1:13,0:15:9.03:173,9,0	./.	./.	1/1:20,5:24:9.03:200,9,0	1/1:26,0:29:8.99:146,9,0	1/1:28,0:28:3:25,3,0	./.	1/1:25,5:30:9.03:244,9,0	1/1:25,0:34:42.11:633,42,0	1/1:24,0:24:6.01:63,6,0	1/1:18,8:26:15.05:408,15,0	1/1:16,0:17:9.03:193,9,0	1/1:17,6:23:12.04:326,12,0	1/1:29,0:30:9.03:199,9,0	1/1:20,11:31:15.05:407,15,0	1/1:18,14:32:21:571,21,0	0/1:28,0:30:23.95:71,0,24	1/1:22,0:23:6.02:73,6,0	1/1:24,0:28:9.03:201,9,0	1/1:23,0:23:6.45:80,6,0	1/1:16,0:19:9.03:181,9,0	1/1:11,2:13:6.02:163,6,0	1/1:25,12:37:36.12:973,36,0	1/1:19,0:24:9.03:152,9,0	1/1:21,0:26:25.32:468,25,0	1/1:21,0:26:14.95:266,15,0	1/1:25,0:28:6.02:129,6,0
chr10	40939728	.	CT	C	493.26	PASS	AB=0.807;AC=23;AF=0.479;AN=48;BaseQRankSum=6.589;DP=326;FS=1.925;HRun=1;HaplotypeScore=62.1969;InbreedingCoeff=0.0655;MQ=27.94;MQ0=73;MQRankSum=-3.008;QD=2.58;ReadPosRankSum=1.345;VQSLOD=-0.5628;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,2:13:1.13:57,1,0	0/0:4,0:4:4.26:0,4,39	./.	./.	./.	0/1:11,1:9:8.88:50,0,9	1/1:16,1:7:0.89:2,1,0	0/1:7,2:8:26.80:86,0,27	0/0:14,0:13:11.28:0,11,74	0/1:7,4:7:48.10:55,0,48	0/1:6,2:7:0.06:0,0,0	0/0:23,0:19:20.31:0,20,292	0/0:9,0:6:9.40:0,9,75	0/1:4,2:4:6.58:62,0,7	1/1:7,2:4:3.01:41,3,0	1/1:8,2:8:0.54:3,1,0	0/0:11,0:5:4.82:0,5,18	0/0:5,0:4:3.01:0,3,37	0/1:6,2:6:0.03:28,0,0	1/1:6,2:5:2.84:26,3,0	1/1:18,4:13:2.78:18,3,0	0/1:12,3:11:19.46:19,0,42	0/0:13,0:11:5.05:0,5,44	0/0:40,0:31:24.66:0,25,416	0/1:10,4:11:29.35:33,0,29	0/1:11,3:10:20.16:50,0,20	1/1:6,1:5:6.96:99,7,0	./.
chr10	40939778	.	CCCTT	C	511.54	PASS	AB=0.969;AC=19;AF=0.339;AN=56;BaseQRankSum=2.753;DP=299;FS=19.620;HRun=0;HaplotypeScore=77.7029;InbreedingCoeff=0.3896;MQ=59.39;MQ0=8;MQRankSum=-3.409;QD=5.38;ReadPosRankSum=0.134;VQSLOD=0.4128;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:9,2:11:8.17:59,0,8	0/0:3,0:3:9.03:0,9,136	0/0:19,0:7:21:0,21,445	0/0:33,0:15:20.57:0,21,536	0/1:5,0:5:11.90:63,0,12	1/1:5,0:5:8.96:113,9,0	1/1:4,1:4:5.47:84,5,0	1/1:11,0:10:0.80:3,1,0	0/0:16,0:16:42.06:0,42,833	1/1:9,0:8:4.96:19,5,0	0/0:6,0:6:8.51:0,9,41	0/0:16,0:16:42.14:0,42,1098	0/0:12,0:11:33.11:0,33,887	1/1:5,0:5:1.82:5,2,0	0/1:10,0:10:5.99:6,0,27	1/1:2,1:3:6.02:73,6,0	1/1:9,0:9:12:139,12,0	0/0:8,0:8:6.67:0,7,35	0/0:6,0:5:4.33:0,4,49	0/0:12,0:11:23.81:0,24,168	0/0:15,0:14:28.41:0,28,183	0/0:0,7:7:0:0,0,0	0/0:10,0:10:30.10:0,30,828	0/0:32,1:33:35.42:0,35,1973	0/0:2,0:1:3:0,3,28	0/1:13,0:12:36.30:44,0,36	0/1:9,0:9:14.25:66,0,14	0/0:6,0:6:5.98:0,6,14
chr10	40941133	.	C	CT	24139.76	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=-8.014;DP=781;FS=1.721;HRun=1;HaplotypeScore=82.2123;InbreedingCoeff=0.9996;MQ=83.77;MQ0=0;MQRankSum=-7.083;QD=41.34;ReadPosRankSum=2.272;VQSLOD=5.4221;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,47:47:99:2062,138,0	1/1:0,9:9:24.08:359,24,0	0/0:36,0:36:99:0,102,1291	0/0:22,0:22:66.20:0,66,830	1/1:1,26:27:75.13:1067,75,0	1/1:0,15:15:36.12:539,36,0	1/1:0,26:26:75.25:1121,75,0	1/1:1,37:38:99:1662,111,0	0/0:25,0:25:75.23:0,75,959	1/1:3,40:43:99:1778,120,0	1/1:0,16:16:48.16:719,48,0	0/0:40,0:40:99:0,120,1529	0/0:35,0:35:99:0,102,1309	1/1:0,31:31:78.26:1169,78,0	1/1:1,32:33:93.32:1394,93,0	1/1:0,39:39:99:1708,114,0	1/1:1,21:22:63.21:944,63,0	1/1:1,30:31:84.28:1258,84,0	1/1:0,22:22:66.11:865,66,0	1/1:0,19:19:57.11:804,57,0	1/1:0,51:51:99:2113,141,0	1/1:1,25:26:72.24:1079,72,0	0/0:20,0:20:51.16:0,51,660	0/0:19,0:19:51.17:0,51,662	1/1:1,15:16:42.14:629,42,0	1/1:2,25:27:72.22:1033,72,0	1/1:3,28:32:81.27:1209,81,0	1/1:0,14:14:42.14:629,42,0
chr10	40941700	.	C	CT	10032.39	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-8.329;DP=430;FS=13.576;HRun=7;HaplotypeScore=38.4000;InbreedingCoeff=0.9798;MQ=71.32;MQ0=2;MQRankSum=-1.221;QD=28.83;ReadPosRankSum=2.147;VQSLOD=4.0813;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,35:38:96.29:1160,96,0	0/0:4,0:4:9.01:0,9,83	0/0:12,0:12:20.98:0,21,187	0/0:15,0:11:18.03:0,18,172	1/1:2,19:21:51.16:616,51,0	1/1:1,16:17:42.13:507,42,0	1/1:1,11:12:24.07:290,24,0	1/1:5,24:29:72.15:821,72,0	0/0:12,0:12:30.05:0,30,290	1/1:2,16:18:48.15:579,48,0	1/1:1,12:13:35.14:405,35,0	0/0:7,0:7:21.03:0,21,203	0/0:8,0:8:24.02:0,24,226	1/1:2,13:15:33.10:399,33,0	1/1:3,12:15:36.11:435,36,0	1/1:1,22:23:60.18:725,60,0	1/1:4,11:15:27.08:326,27,0	1/1:1,16:17:48.15:580,48,0	1/1:2,15:16:42.10:491,42,0	1/1:2,9:11:24.07:290,24,0	1/1:5,6:11:12.04:145,12,0	1/1:2,8:10:23.99:271,24,0	0/0:13,0:13:36.06:0,36,348	0/0:11,0:11:30.03:0,30,283	1/1:4,24:28:69.21:833,69,0	1/1:1,8:9:24.07:290,24,0	1/1:3,17:20:48.15:580,48,0	1/1:0,9:9:24.07:290,24,0
chr10	40942416	.	TTG	T	157.30	PASS	AB=0.879;AC=4;AF=0.074;AN=54;BaseQRankSum=-0.772;DP=630;FS=1.134;HRun=0;HaplotypeScore=130.6667;InbreedingCoeff=-0.1002;MQ=62.81;MQ0=3;MQRankSum=3.395;QD=1.87;ReadPosRankSum=2.045;VQSLOD=2.0616;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:34:9.01:0,9,94	0/1:17,0:17:15.89:16,0,188	./.	0/0:29,0:20:2.04:0,2,6	0/0:22,0:22:2.75:0,3,24	0/0:25,0:24:2.54:0,3,26	0/0:33,0:31:20.13:0,20,221	0/0:48,0:45:38.22:0,38,442	0/1:18,2:20:31.72:32,0,421	0/0:27,0:27:44.05:0,44,493	0/0:21,0:22:7.97:0,8,46	0/0:19,0:19:42.14:0,42,641	0/0:17,0:17:36.06:0,36,501	0/0:14,0:15:6.46:0,6,52	0/0:23,0:22:9.01:0,9,94	0/0:17,0:18:15.04:0,15,189	0/0:19,0:17:14.97:0,15,156	0/0:22,0:22:15.05:0,15,205	0/0:16,0:16:10.24:0,10,100	0/0:14,0:14:3:0,3,28	0/0:11,0:11:6:0,6,51	0/0:22,0:21:9.14:0,9,80	0/1:9,5:14:99:109,0,202	0/1:28,5:33:99:107,0,619	0/0:29,0:32:17.95:0,18,171	0/0:25,0:23:29.83:0,30,365	0/0:21,0:22:23.97:0,24,238	0/0:3,0:3:9.03:0,9,117
chr10	40942480	.	C	CAG	14358.10	PASS	AB=0.519;AC=41;AF=0.732;AN=56;BaseQRankSum=7.367;DP=491;FS=5.647;HRun=0;HaplotypeScore=138.7711;InbreedingCoeff=0.8860;MQ=74.00;MQ0=0;MQRankSum=-13.845;QD=40.56;ReadPosRankSum=-1.312;VQSLOD=5.8924;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,30:36:72.72:1310,73,0	1/1:0,9:9:21.07:385,21,0	0/0:13,0:12:27.09:0,27,386	0/0:23,0:21:59.98:0,60,784	1/1:4,12:16:26.73:487,27,0	1/1:2,8:10:24.08:439,24,0	1/1:1,21:22:60.21:1081,60,0	1/1:13,18:31:78.21:1286,78,0	0/0:15,0:15:39.13:0,39,559	1/1:9,19:29:78.21:1323,78,0	1/1:3,13:16:36.12:655,36,0	0/0:17,0:17:45.14:0,45,626	0/0:22,0:22:63.21:0,63,902	1/1:2,11:13:30.10:548,30,0	1/1:4,18:22:54.17:957,54,0	0/1:1,13:14:3.85:616,0,4	1/1:2,11:13:30.10:541,30,0	1/1:4,8:12:24.08:423,24,0	1/1:2,12:14:39.12:686,39,0	1/1:3,17:20:42.14:768,42,0	1/1:4,6:10:6.02:111,6,0	1/1:1,16:17:33.11:604,33,0	0/0:23,0:23:60.20:0,60,859	0/0:24,0:24:66.20:0,66,926	1/1:4,12:16:30.10:548,30,0	1/1:3,12:15:39.13:714,39,0	1/1:3,15:18:45.15:822,45,0	1/1:0,1:1:3.01:55,3,0
chr10	40942512	.	GATT	G	14517.50	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=14.297;DP=538;FS=1.182;HRun=0;HaplotypeScore=145.4363;InbreedingCoeff=0.9984;MQ=81.04;MQ0=0;MQRankSum=-14.865;QD=37.51;ReadPosRankSum=0.485;VQSLOD=5.4170;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,33:38:59.31:992,59,0	0/0:9,0:9:27.09:0,27,612	0/0:26,0:25:69.22:0,69,1449	0/0:21,0:21:60.20:0,60,1305	1/1:0,17:17:38.84:529,39,0	1/1:0,15:14:36.12:599,36,0	1/1:2,20:21:42.04:602,42,0	1/1:3,22:25:69.22:1124,69,0	0/0:15,0:15:42.14:0,42,951	1/1:4,17:21:48.16:799,48,0	1/1:0,25:25:54.10:839,54,0	0/0:15,0:15:42.14:0,42,952	0/0:21,0:21:60.21:0,60,1317	1/1:0,19:19:54.18:899,54,0	1/1:0,27:27:72.25:1198,72,0	1/1:0,18:18:51.13:819,51,0	1/1:3,12:15:33.10:522,33,0	1/1:1,10:11:30.10:500,30,0	1/1:2,10:12:30.10:500,30,0	1/1:1,26:27:63.13:989,63,0	1/1:2,12:14:23.07:296,23,0	1/1:0,15:15:39.09:619,39,0	0/0:23,0:23:69.24:0,69,1559	0/0:21,0:21:63.22:0,63,1428	1/1:0,18:18:39.13:649,39,0	1/1:0,17:17:51.17:847,51,0	1/1:1,19:20:51.17:846,51,0	1/1:1,10:11:21.07:350,21,0
chr10	40943842	.	T	TG	4713.27	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-9.812;DP=453;FS=0.000;HRun=5;HaplotypeScore=51.3338;InbreedingCoeff=0.9880;MQ=79.49;MQ0=1;MQRankSum=-2.223;QD=30.02;ReadPosRankSum=0.974;VQSLOD=5.1684;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,27:33:69.22:908,69,0	1/1:0,9:9:24.08:307,24,0	0/0:15,0:15:30.07:0,30,322	0/0:11,0:11:20.95:0,21,200	1/1:5,15:20:39.13:510,39,0	1/1:0,17:17:39.13:513,39,0	1/1:1,21:22:54.13:691,54,0	0/0:20,0:20:51.11:0,51,540	0/0:18,0:18:51.13:0,51,548	0/0:16,0:16:42.10:0,42,445	0/0:20,0:20:54.11:0,54,571	0/0:17,0:17:39.09:0,39,416	0/0:21,0:20:54.13:0,54,579	1/1:0,9:9:18.06:237,18,0	0/0:12,0:12:30.07:0,30,322	1/1:3,10:13:33.09:418,33,0	1/1:3,16:19:48.16:632,48,0	0/0:13,0:13:36.09:0,36,386	0/0:14,0:14:39.07:0,39,398	0/0:11,0:11:24.06:0,24,258	0/0:26,0:26:66.16:0,66,709	1/1:2,13:15:39.11:497,39,0	0/0:13,0:13:36.09:0,36,387	0/0:14,0:14:42.07:0,42,439	0/0:12,0:12:33.08:0,33,355	0/0:23,0:23:63.16:0,63,677	0/0:16,0:16:42.11:0,42,451	0/0:4,0:4:9.02:0,9,97
chr10	40944752	.	AG	A	2039.32	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=16.099;DP=527;FS=2.269;HRun=2;HaplotypeScore=113.4036;InbreedingCoeff=0.9482;MQ=76.44;MQ0=0;MQRankSum=-15.531;QD=11.72;ReadPosRankSum=1.652;VQSLOD=2.3816;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:61,0:61:99:0,178,2629	0/0:5,0:5:15.05:0,15,225	0/0:8,0:8:2.33:0,2,266	0/0:20,1:21:45.12:0,45,636	0/0:20,0:20:57.18:0,57,835	0/0:24,0:24:72.24:0,72,1079	0/0:24,0:24:69.23:0,69,1034	1/1:5,11:16:35.56:250,36,0	0/0:24,0:24:72.23:0,72,1046	1/1:4,15:19:37.63:284,38,0	1/1:2,4:6:4.66:12,5,0	0/0:20,0:20:60.20:0,60,899	0/0:21,0:21:63.19:0,63,904	0/0:15,0:15:42.14:0,42,630	1/1:4,11:15:32.29:194,32,0	0/0:13,0:13:39.13:0,39,585	0/0:34,0:34:99:0,102,1524	1/1:5,9:14:26.83:201,27,0	1/1:5,9:14:23.83:171,24,0	1/1:4,8:12:18.89:94,19,0	1/1:6,11:18:15.19:92,15,0	0/0:23,0:23:69.22:0,69,1013	0/0:14,0:14:42.14:0,42,629	0/0:26,0:26:78.26:0,78,1168	1/1:4,13:17:33.98:205,34,0	1/1:1,22:24:68.28:471,68,0	1/1:2,11:13:28.77:177,29,0	1/1:0,6:6:17.62:111,18,0
chr10	40944756	.	T	TCACC	9389.21	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=15.543;DP=527;FS=1.642;HRun=0;HaplotypeScore=119.9673;InbreedingCoeff=0.9809;MQ=76.46;MQ0=0;MQRankSum=-16.287;QD=54.59;ReadPosRankSum=0.810;VQSLOD=6.1991;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:62,0:62:99:0,181,3731	0/0:5,0:5:15.05:0,15,298	0/0:8,0:8:20.89:0,21,356	0/0:19,0:20:46.34:0,46,811	0/0:20,0:20:60.21:0,60,1258	0/0:24,0:24:72.25:0,72,1496	0/0:23,0:23:69.24:0,69,1447	1/1:7,10:18:51.17:1168,51,0	0/0:23,0:23:69.24:0,69,1433	1/1:2,15:17:51.15:1152,51,0	1/1:3,4:7:6.01:92,6,0	0/0:20,0:20:60.21:0,60,1244	0/0:21,0:21:63.22:0,63,1321	0/0:15,0:15:42.14:0,42,881	1/1:5,11:16:45.11:961,45,0	0/0:15,0:15:45.14:0,45,892	0/0:34,0:34:99:0,102,2079	1/1:4,9:13:36.12:853,36,0	1/1:5,9:14:30.57:717,31,0	1/1:1,8:9:21.06:412,21,0	1/1:7,11:18:21.32:438,21,0	0/0:26,0:26:75.25:0,75,1535	0/0:14,0:14:42.14:0,42,881	0/0:25,0:25:75.26:0,75,1572	1/1:1,13:14:30.10:673,30,0	1/1:5,22:27:77.74:1720,78,0	1/1:0,11:11:30.10:667,30,0	1/1:2,6:8:24.08:537,24,0
chr10	40945127	.	G	GA	10395.32	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=1.420;DP=676;FS=4.910;HRun=1;HaplotypeScore=74.9960;InbreedingCoeff=0.9988;MQ=88.48;MQ0=0;MQRankSum=-0.948;QD=38.36;ReadPosRankSum=-0.139;VQSLOD=5.2366;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,147,1828	0/0:6,0:6:17.92:0,18,193	0/0:25,0:25:74.93:0,75,892	0/0:26,0:26:62.75:0,63,780	0/0:25,0:25:75.24:0,75,970	0/0:31,0:31:93.26:0,93,1183	0/0:20,0:20:51.14:0,51,633	1/1:0,31:31:93.30:1355,93,0	0/0:23,0:23:69.14:0,69,855	1/1:0,21:21:60.20:887,60,0	1/1:0,14:14:39.13:577,39,0	0/0:25,0:25:72.15:0,72,872	0/0:29,0:29:84.19:0,84,1064	0/0:28,0:28:81.26:0,81,1047	1/1:0,29:29:84.28:1242,84,0	0/0:22,0:22:63.20:0,63,815	0/0:28,0:28:81.23:0,81,1020	1/1:0,16:16:38.93:549,39,0	1/1:0,29:28:81.10:1091,81,0	1/1:1,16:17:45.04:613,45,0	1/1:3,40:43:99:1445,99,0	0/0:21,0:21:60.17:0,60,752	0/0:17,0:17:51.17:0,51,659	0/0:26,0:26:69.21:0,69,879	1/1:0,15:15:36.12:532,36,0	1/1:1,19:20:57.08:777,57,0	1/1:0,19:19:45.15:663,45,0	1/1:0,17:17:45.15:665,45,0
chr10	40945285	.	GGTGTGTGTGTGTGTGTGT	G	1529.36	PASS	AB=1.000;AC=15;AF=0.288;AN=52;BaseQRankSum=3.972;DP=496;FS=1.067;HRun=0;HaplotypeScore=237.1457;InbreedingCoeff=0.6032;MQ=66.77;MQ0=27;MQRankSum=-3.443;QD=13.66;ReadPosRankSum=0.853;VQSLOD=2.3460;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:26:15.03:0,15,506	0/0:6,0:5:6.02:0,6,482	0/0:22,0:16:9:0,9,139	0/0:32,0:23:8.62:0,9,97	0/0:24,0:22:18.05:0,18,1090	0/0:14,0:13:12.01:0,12,331	0/0:19,0:19:33.10:0,33,1332	0/0:20,0:18:0:0,0,0	0/0:19,0:19:18.40:0,18,961	./.	0/0:4,2:6:0.89:0,1,2	0/0:23,0:23:42.14:0,42,1789	0/0:19,0:18:23.10:0,23,1353	0/0:16,0:15:14.75:0,15,962	1/1:13,8:21:3.01:143,3,0	0/0:18,0:18:2.06:0,2,739	0/0:29,0:29:29.35:0,29,1532	1/1:9,2:11:12:456,12,0	1/1:16,0:14:3.95:420,4,0	1/1:12,0:12:3:25,3,0	./.	0/0:17,0:17:24.08:0,24,1248	0/0:8,0:8:9.03:0,9,258	0/0:32,0:31:45.15:0,45,2271	1/1:9,0:11:6:75,6,0	1/1:20,0:20:2.99:26,3,0	0/1:8,0:8:10.76:248,0,11	1/1:12,0:7:6.02:289,6,0
chr10	40945331	.	TGAGAGAGAGA	T	138.61	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=3.064;DP=451;FS=0.000;HRun=0;HaplotypeScore=133.9138;InbreedingCoeff=0.3774;MQ=41.88;MQ0=26;MQRankSum=0.065;QD=1.46;ReadPosRankSum=0.501;VQSLOD=2.0071;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:21,14:33:5.94:168,6,0	0/0:6,0:5:12.04:0,12,392	0/0:1,0:1:3.01:0,3,119	0/0:5,0:2:6.02:0,6,160	0/0:15,0:13:9.03:0,9,241	0/1:17,0:16:57.31:57,0,88	1/1:13,0:19:1.33:15,1,0	0/0:18,0:15:30.10:0,30,783	0/0:21,0:21:37.06:0,37,1257	0/0:14,0:12:30.10:0,30,838	0/0:7,0:7:3.01:0,3,125	0/0:22,0:22:20.96:0,21,1208	0/0:17,0:16:12.92:0,13,365	0/0:21,0:19:30.14:0,30,667	0/0:16,0:14:0.47:0,0,1	0/0:19,0:19:24.04:0,24,562	0/0:23,0:23:4.32:0,4,589	0/0:9,0:7:14.26:0,14,292	0/0:14,0:13:18.06:0,18,563	0/0:15,0:14:0.89:0,1,2	0/0:16,0:16:2.46:0,2,129	1/1:12,2:20:0.46:1,0,0	0/0:14,0:13:15.04:0,15,488	0/0:31,0:29:36.10:0,36,1065	0/0:12,0:10:3.01:0,3,129	0/0:11,0:10:20.99:0,21,752	0/0:17,0:16:38.80:0,39,1318	0/0:10,0:6:7.19:0,7,45
chr10	40946346	.	TCTTC	T	1854.63	PASS	AC=24;AF=0.480;AN=50;BaseQRankSum=-5.711;DP=540;FS=0.000;HRun=0;HaplotypeScore=135.6792;InbreedingCoeff=0.8717;MQ=64.84;MQ0=8;MQRankSum=2.464;QD=8.83;ReadPosRankSum=-0.850;VQSLOD=2.3583;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:34.66:0,35,753	1/1:11,0:11:6.01:56,6,0	./.	./.	1/1:16,0:29:15.02:139,15,0	1/1:5,0:10:9.01:84,9,0	1/1:10,0:19:14.61:111,15,0	0/0:31,0:30:0:0,0,0	1/1:11,7:18:15.05:230,15,0	0/0:31,0:31:23.26:0,23,217	0/0:18,0:18:12.03:0,12,130	1/1:3,6:8:12.04:184,12,0	1/1:9,6:15:15.05:230,15,0	1/1:8,0:14:12.01:112,12,0	0/0:17,0:17:14.91:0,15,133	1/1:7,0:16:17.98:159,18,0	1/1:8,0:15:3:28,3,0	0/0:12,0:13:9.02:0,9,97	0/0:30,0:27:14.98:0,15,144	0/0:14,0:14:14.90:0,15,137	./.	0/0:12,0:12:12.04:0,12,273	1/1:9,11:20:17.34:275,17,0	1/1:19,12:31:30.09:442,30,0	0/0:26,0:25:33:0,33,315	0/0:20,0:20:23.98:0,24,222	0/0:20,0:20:26.73:0,27,236	0/0:20,0:20:21.05:0,21,222
chr10	40946377	.	T	TTCCC	6360.53	PASS	AB=0.688;AC=15;AF=0.268;AN=56;BaseQRankSum=2.901;DP=438;FS=3.386;HRun=0;HaplotypeScore=160.2949;InbreedingCoeff=0.0970;MQ=47.59;MQ0=15;MQRankSum=-5.243;QD=31.96;ReadPosRankSum=3.089;VQSLOD=4.9716;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:72.18:0,72,1411	0/0:11,0:11:0.67:0,1,241	0/0:13,0:9:21.04:0,21,319	0/0:14,0:7:14.99:0,15,202	0/0:23,0:22:54.14:0,54,850	0/0:9,0:9:21.07:0,21,342	0/0:19,0:19:42.12:0,42,708	1/1:17,0:12:1.15:106,1,0	0/0:13,0:13:33.10:0,33,527	0/1:4,14:22:66.07:1105,0,66	1/1:2,9:10:20.98:416,21,0	0/0:12,0:11:30.10:0,30,517	0/0:11,0:10:24.03:0,24,359	0/0:11,0:11:26.67:0,27,371	0/1:5,8:15:34.69:470,0,35	0/0:18,0:17:39.11:0,39,582	0/0:13,0:12:18.06:0,18,324	0/1:6,6:12:29.30:176,0,29	0/1:12,4:13:68.12:435,0,68	0/1:12,4:16:12.96:735,0,13	0/1:7,0:7:38.11:40,0,38	0/0:9,0:9:24.08:0,24,501	0/0:16,0:16:33.09:0,33,491	0/0:22,0:21:56.21:0,56,878	1/1:2,19:22:14.40:996,14,0	0/1:6,11:17:63.53:765,0,64	0/1:11,16:28:79.93:793,0,80	0/1:4,9:15:99:323,0,109
chr10	40946389	.	T	TTCC	1235.15	PASS	AB=0.852;AC=13;AF=0.232;AN=56;BaseQRankSum=8.658;DP=429;FS=1.995;HRun=0;HaplotypeScore=173.5312;InbreedingCoeff=-0.1091;MQ=45.35;MQ0=15;MQRankSum=-4.378;QD=6.68;ReadPosRankSum=-2.321;VQSLOD=2.6289;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:68.72:0,69,1236	0/0:10,0:10:6.42:0,6,43	0/0:17,0:11:23.95:0,24,371	0/0:16,0:7:16.87:0,17,250	0/0:22,0:21:44.74:0,45,578	0/0:11,0:11:27.07:0,27,406	0/0:22,0:23:51.95:0,52,812	1/1:20,0:15:10.34:169,10,0	0/0:10,0:10:21.05:0,21,265	0/1:13,3:16:90.27:90,0,305	0/1:8,1:8:14.45:14,0,53	0/0:13,0:12:33.10:0,33,513	0/0:10,0:9:20.73:0,21,253	0/0:11,0:11:27.04:0,27,354	0/1:9,5:14:99:195,0,136	0/0:19,0:18:39.09:0,39,581	0/0:14,0:13:24.07:0,24,416	0/1:9,2:11:99:108,0,174	0/1:24,2:22:99:116,0,332	0/1:11,4:15:99:112,0,282	0/1:8,0:8:14.02:14,0,109	0/0:9,0:9:27.09:0,27,502	0/0:14,0:14:25.31:0,25,300	0/0:21,0:20:54.13:0,54,701	0/1:18,1:19:3.19:3,0,269	0/1:10,4:14:99:150,0,227	0/1:14,10:24:99:388,0,265	0/1:8,1:9:30.48:30,0,96
chr10	40946395	.	CTT	C	696.08	PASS	AB=0.848;AC=16;AF=0.286;AN=56;BaseQRankSum=8.846;DP=428;FS=3.914;HRun=2;HaplotypeScore=164.7359;InbreedingCoeff=-0.0255;MQ=48.35;MQ0=14;MQRankSum=-6.025;QD=3.55;ReadPosRankSum=3.108;VQSLOD=-0.2375;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:71.61:0,72,1287	1/1:10,0:10:7.72:34,8,0	0/0:21,0:13:35.99:0,36,530	0/1:18,0:9:16.43:16,0,185	0/0:23,0:22:24.49:0,24,406	0/0:13,0:13:23.84:0,24,361	0/0:24,0:24:46.70:0,47,657	1/1:22,0:17:18.84:97,19,0	0/0:12,0:12:14.55:0,15,228	0/1:10,3:13:58.58:59,0,181	0/1:5,1:5:4.63:5,0,92	0/0:14,0:13:23.71:0,24,356	0/0:11,0:10:8.51:0,9,136	0/0:13,0:13:18.58:0,19,314	0/1:8,5:13:83.10:115,0,83	0/0:18,0:18:19.13:0,19,357	0/0:16,0:15:26.51:0,27,385	0/1:7,2:9:62.13:62,0,123	0/1:23,2:21:80.59:81,0,163	0/1:9,4:13:65.55:76,0,66	0/1:8,0:8:2.58:3,0,26	0/0:8,0:8:24.08:0,24,442	0/0:15,0:15:8.88:0,9,137	0/0:19,0:18:17.05:0,17,272	0/1:14,1:15:0.62:1,0,235	0/1:9,4:13:81:81,0,141	0/1:12,10:22:99:219,0,163	0/1:7,1:8:6.70:7,0,187
chr10	40946397	.	TCTTCCTCCCTCCCTC	T	4219.47	PASS	AB=0.972;AC=13;AF=0.232;AN=56;BaseQRankSum=4.318;DP=461;FS=6.905;HRun=0;HaplotypeScore=283.0768;InbreedingCoeff=-0.0673;MQ=47.35;MQ0=13;MQRankSum=-4.551;QD=21.64;ReadPosRankSum=2.084;VQSLOD=2.7704;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:71.61:0,72,3492	0/1:11,0:11:8.38:236,0,8	0/0:23,0:13:36.12:0,36,1306	0/0:19,0:11:27.12:0,27,760	0/0:23,0:22:41.58:0,42,1108	0/0:13,0:13:33.11:0,33,1197	0/0:24,0:24:56.88:0,57,1961	1/1:7,13:17:37.41:774,37,0	0/0:12,0:12:30.10:0,30,1103	0/1:15,0:17:99:237,0,306	0/1:8,0:7:0.80:1,0,177	0/0:14,0:13:36.12:0,36,1584	0/0:12,0:11:27.09:0,27,803	0/0:13,0:13:32.88:0,33,841	0/1:17,0:20:99:371,0,208	0/0:18,0:18:38.85:0,39,1037	0/0:16,0:15:27.02:0,27,875	0/1:8,0:9:99:249,0,155	0/1:15,12:23:99:853,0,143	0/1:11,0:14:99:416,0,150	0/1:5,0:10:33.87:187,0,34	0/0:8,0:8:24.08:0,24,1345	0/0:16,0:16:30.10:0,30,1063	0/0:19,0:18:48.16:0,48,1771	0/1:15,0:17:99:183,0,373	0/1:16,0:18:99:238,0,288	0/1:20,0:23:99:475,0,234	0/0:9,0:9:9.67:0,10,270
chr10	40946410	.	C	CT	1299.27	PASS	AB=0.670;AC=13;AF=0.232;AN=56;BaseQRankSum=12.433;DP=416;FS=4.658;HRun=1;HaplotypeScore=149.6710;InbreedingCoeff=-0.1080;MQ=49.66;MQ0=10;MQRankSum=-8.749;QD=9.99;ReadPosRankSum=2.468;VQSLOD=1.8129;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:72.23:0,72,933	0/1:10,2:12:29.37:36,0,29	0/0:29,0:16:42.13:0,42,534	0/0:27,0:14:31.30:0,31,384	0/0:21,0:20:42.14:0,42,544	0/0:15,0:15:39.06:0,39,484	0/0:24,0:24:60.19:0,60,777	0/0:17,0:15:24.15:0,24,153	0/0:12,0:12:36.12:0,36,467	0/1:2,7:9:11.43:175,0,11	1/1:1,3:3:8.95:67,9,0	0/0:14,0:13:39.13:0,39,506	0/0:12,0:11:26.89:0,27,342	0/0:13,0:13:33.11:0,33,427	0/1:3,12:15:20.18:227,0,20	0/0:21,0:21:51.16:0,51,641	0/0:16,0:15:33.01:0,33,392	0/1:5,4:9:57.37:98,0,57	0/1:12,5:17:99:103,0,162	0/1:4,6:10:64.01:108,0,64	0/1:7,3:10:40.85:52,0,41	0/0:7,0:7:21.07:0,21,272	0/0:14,0:14:33.08:0,33,411	0/0:19,0:18:51.17:0,51,661	0/1:3,3:6:28.69:55,0,29	0/1:4,10:14:42.28:240,0,42	0/1:5,12:17:41.66:235,0,42	0/1:4,3:7:61.16:61,0,63
chr10	40946413	.	TC	T	526.59	PASS	AB=0.656;AC=13;AF=0.232;AN=56;BaseQRankSum=12.747;DP=427;FS=8.436;HRun=5;HaplotypeScore=151.5837;InbreedingCoeff=-0.1190;MQ=50.01;MQ0=7;MQRankSum=-9.535;QD=4.05;ReadPosRankSum=3.747;VQSLOD=-0.3246;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:69.17:0,69,906	0/1:10,2:12:11.36:11,0,53	0/0:32,0:16:36.09:0,36,473	0/0:28,0:15:26.52:0,27,458	0/0:19,0:18:48.16:0,48,654	0/0:17,0:17:36.11:0,36,474	0/0:25,0:25:54.14:0,54,714	0/0:17,0:17:30.74:0,31,339	0/0:14,0:14:36.11:0,36,474	0/1:3,7:10:60.40:85,0,60	1/1:0,3:3:7.87:32,8,0	0/0:16,0:15:45.14:0,45,592	0/0:13,0:13:30.07:0,30,376	0/0:16,0:16:42.11:0,42,526	0/1:3,12:15:59.18:86,0,59	0/0:21,0:21:48.16:0,48,656	0/0:16,0:16:39.13:0,39,517	0/1:4,4:8:46.39:46,0,114	0/1:13,5:18:37.72:38,0,360	0/1:4,6:10:37.29:37,0,116	0/1:7,3:10:15.36:15,0,68	0/0:7,0:7:18.06:0,18,246	0/0:14,0:14:33.11:0,33,449	0/0:19,0:18:45.15:0,45,615	0/1:3,3:6:16.26:16,0,67	0/1:4,10:14:54.83:116,0,55	0/1:5,12:17:98.93:99,0,112	0/1:1,6:7:19.90:101,0,20
chr10	40946772	.	TTGTA	T	1182.93	PASS	AC=34;AF=0.773;AN=44;BaseQRankSum=1.872;DP=290;FS=2.555;HRun=0;HaplotypeScore=76.8982;InbreedingCoeff=0.5238;MQ=73.42;MQ0=4;MQRankSum=-0.557;QD=6.36;ReadPosRankSum=0.672;VQSLOD=2.0613;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:25:17.72:139,18,0	./.	0/0:19,0:13:0.47:0,0,1	0/0:8,0:5:0:0,0,0	1/1:11,0:11:14.71:93,15,0	1/1:7,4:11:3.01:47,3,0	1/1:15,0:15:15.01:138,15,0	./.	1/1:14,0:14:21.02:208,21,0	./.	./.	0/0:8,0:8:5.97:0,6,45	1/1:5,0:5:12.01:109,12,0	1/1:10,0:10:3:28,3,0	1/1:8,0:8:5.94:41,6,0	1/1:13,0:13:15.02:140,15,0	1/1:23,0:23:3.01:37,3,0	1/1:10,0:10:11.92:87,12,0	./.	1/1:6,0:6:2.97:20,3,0	./.	1/1:6,0:6:3:28,3,0	0/0:11,0:11:26.91:0,27,256	0/0:13,0:13:11.99:0,12,124	1/1:5,0:5:8.90:60,9,0	1/1:7,0:7:2.97:20,3,0	1/1:9,0:9:11.91:89,12,0	1/1:7,0:7:3:28,3,0
chr10	40946810	.	GTATGTATTTATT	G	1442.93	PASS	AB=1.000;AC=24;AF=0.545;AN=44;BaseQRankSum=-0.250;DP=166;FS=3.409;HRun=0;HaplotypeScore=78.1678;InbreedingCoeff=0.1038;MQ=51.53;MQ0=6;MQRankSum=0.724;QD=12.44;ReadPosRankSum=2.199;VQSLOD=1.6477;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:14:25.34:268,25,0	./.	./.	./.	1/1:1,8:9:11.87:108,12,0	0/0:12,0:12:24.08:0,24,669	1/1:8,0:8:18.02:188,18,0	./.	0/1:9,0:9:99:138,0,106	0/0:2,0:1:3.01:0,3,44	./.	0/0:5,0:5:11.99:0,12,156	0/1:6,0:6:90.75:91,0,92	1/1:6,0:6:15.04:255,15,0	1/1:2,0:2:5.94:41,6,0	0/1:9,0:9:16.08:118,0,16	1/1:2,16:18:3.01:112,3,0	0/1:10,0:10:64.25:64,0,227	0/0:4,0:3:6.01:0,6,84	1/1:1,0:1:2.97:20,3,0	./.	1/1:2,0:2:3:28,3,0	0/0:12,0:12:35.94:0,36,523	0/0:7,0:6:18.01:0,18,338	0/1:7,0:7:38.93:39,0,138	0/1:3,0:3:10.97:11,0,74	0/1:8,0:8:80.81:81,0,153	0/1:3,0:3:37.87:38,0,48
chr10	40947707	.	GACACACACAGACAC	G	1758.84	PASS	AB=0.974;AC=27;AF=0.482;AN=56;BaseQRankSum=6.506;DP=834;FS=25.098;HRun=0;HaplotypeScore=353.5268;InbreedingCoeff=0.0023;MQ=46.40;MQ0=21;MQRankSum=-6.687;QD=3.20;ReadPosRankSum=-6.929;VQSLOD=0.2818;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:24,25:49:15.02:184,15,0	0/1:11,0:12:13.83:14,0,189	0/0:19,0:7:15:0,15,415	0/0:39,0:11:12.65:0,13,402	1/1:7,17:23:5.74:67,6,0	1/1:12,11:23:6.02:239,6,0	1/1:21,18:38:3.01:34,3,0	0/1:21,0:17:21.11:21,0,278	0/0:42,0:42:96.33:0,96,4567	0/1:54,0:52:99:280,0,1054	0/1:12,0:14:39.90:40,0,90	0/0:45,0:43:81.28:0,81,3813	0/0:35,0:35:56.46:0,56,3681	1/1:7,21:28:12.04:230,12,0	0/1:28,0:29:6.05:6,0,315	0/1:10,11:21:91.81:148,0,92	1/1:20,1:21:9.02:196,9,0	0/0:16,0:16:29.84:0,30,552	0/1:18,0:14:24.32:24,0,247	0/1:22,0:24:19.90:20,0,186	0/1:51,0:48:44.18:44,0,54	1/1:8,19:27:9.03:111,9,0	0/0:27,0:27:54.17:0,54,2517	0/0:62,0:62:99:0,138,6779	0/1:21,0:21:53.83:54,0,161	0/1:38,0:37:59.93:60,0,789	0/1:16,0:18:99:107,0,377	0/1:4,0:6:61.75:62,0,92
chr10	40947715	.	CAG	C	2918.72	PASS	AB=0.857;AC=20;AF=0.357;AN=56;BaseQRankSum=11.946;DP=826;FS=15.474;HRun=0;HaplotypeScore=238.8128;InbreedingCoeff=0.2640;MQ=46.92;MQ0=19;MQRankSum=-7.930;QD=8.32;ReadPosRankSum=-2.690;VQSLOD=1.5721;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:46:5.37:0,5,165	0/1:9,2:11:27.06:72,0,27	0/0:25,1:10:14.50:0,14,315	0/0:39,0:11:7.46:0,7,243	0/0:24,0:23:14.57:0,15,93	0/0:21,0:21:4.55:0,5,141	0/0:35,0:34:11.67:0,12,92	0/1:16,3:15:76.16:80,0,76	0/0:43,0:43:91.64:0,92,1812	0/1:41,12:48:4.42:790,0,4	1/1:12,3:14:14.17:92,14,0	0/0:47,0:46:99:0,120,1836	0/0:32,0:32:86.45:0,86,1506	0/0:24,0:24:0.29:0,0,38	0/1:24,9:32:11.50:92,0,11	0/0:19,0:19:6.29:0,6,126	0/1:20,0:20:64.06:119,0,64	0/1:17,0:17:29.56:112,0,30	0/1:11,4:12:10.71:146,0,11	1/1:18,8:26:12.61:135,13,0	1/1:53,4:51:11.75:163,12,0	0/0:25,0:25:17.49:0,17,122	0/0:29,0:29:60.16:0,60,1128	0/0:63,0:63:99:0,159,2768	1/1:16,4:19:0.34:70,0,0	0/1:28,13:38:58.02:595,0,58	1/1:9,9:18:33.03:458,33,0	1/1:3,3:6:16.83:174,17,0
chr10	40947717	.	GACAC	G	1842.44	PASS	AB=0.937;AC=19;AF=0.339;AN=56;BaseQRankSum=9.254;DP=821;FS=12.512;HRun=0;HaplotypeScore=258.9918;InbreedingCoeff=-0.2654;MQ=46.69;MQ0=20;MQRankSum=-6.032;QD=4.53;ReadPosRankSum=-5.065;VQSLOD=0.4365;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:46:1.93:0,2,46	0/1:11,0:11:13.97:14,0,114	0/0:29,0:11:23.50:0,23,441	0/0:42,0:11:16.73:0,17,429	0/0:24,0:23:5.30:0,5,25	1/1:20,0:20:6.01:59,6,0	0/0:34,0:33:2.92:0,3,17	0/1:19,0:15:20.45:20,0,249	0/0:44,0:44:99:0,114,2457	0/1:47,5:47:99:387,0,539	0/1:14,1:14:38.90:99,0,39	0/0:46,0:44:99:0,99,2418	0/0:34,0:34:71.50:0,71,2031	0/1:23,0:23:15.37:19,0,15	0/1:30,3:32:99:101,0,163	0/1:17,0:17:21.13:21,0,77	1/1:18,0:18:25.27:284,25,0	0/1:13,4:17:99:141,0,235	0/1:14,0:12:47.89:48,0,116	0/1:24,0:24:52.65:53,0,101	0/1:39,15:48:32.77:33,0,64	0/0:24,0:24:7.19:0,7,29	0/0:29,0:29:63.18:0,63,1446	0/0:60,1:61:99:0,147,3518	0/1:19,1:19:43.06:43,0,90	0/1:39,4:40:99:430,0,324	0/1:17,1:17:99:214,0,108	0/1:7,0:7:31.78:41,0,32
chr10	40947719	.	C	CAG	60.02	PASS	AB=0.882;AC=3;AF=0.054;AN=56;BaseQRankSum=4.343;DP=815;FS=0.707;HRun=0;HaplotypeScore=250.7462;InbreedingCoeff=0.1256;MQ=46.66;MQ0=20;MQRankSum=0.525;QD=1.36;ReadPosRankSum=-1.499;VQSLOD=2.2570;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:46:35.30:0,35,238	0/1:5,6:11:1.05:128,0,1	0/0:29,0:11:25.07:0,25,312	0/0:42,0:12:27.55:0,28,389	0/0:23,0:22:11.83:0,12,81	0/0:17,0:17:17.62:0,18,119	0/0:33,0:32:2.92:0,3,17	0/0:19,0:15:9.80:0,10,85	0/0:42,0:42:99:0,113,1683	0/0:53,0:48:57.52:0,58,340	0/0:14,0:14:13.81:0,14,67	0/0:45,0:43:99:0,108,1578	0/0:34,0:34:93.21:0,93,1346	0/0:23,0:23:11.69:0,12,68	0/0:32,0:31:16.81:0,17,114	0/0:16,0:16:11.85:0,12,104	0/0:17,0:17:24.84:0,25,140	0/1:17,0:17:13.36:13,0,39	0/1:16,0:12:13.58:14,0,65	0/0:24,0:24:13.42:0,13,66	0/0:55,0:49:6.54:0,7,36	0/0:23,0:23:14.84:0,15,106	0/0:28,0:28:72.16:0,72,989	0/0:64,0:64:99:0,162,2308	0/0:21,0:20:6.36:0,6,50	0/0:45,0:42:59.59:0,60,374	0/0:18,0:17:26.80:0,27,179	0/0:7,0:7:11.57:0,12,64
chr10	40947721	.	C	CACACACAG	6706.30	PASS	AB=0.970;AC=36;AF=0.643;AN=56;BaseQRankSum=13.492;DP=811;FS=21.530;HRun=0;HaplotypeScore=291.8785;InbreedingCoeff=0.4316;MQ=46.43;MQ0=20;MQRankSum=-9.478;QD=12.80;ReadPosRankSum=-2.098;VQSLOD=2.3676;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:43,0:43:6.69:27,7,0	1/1:11,0:11:9.44:168,9,0	0/0:33,0:13:4.96:0,5,436	0/0:42,0:12:28.18:0,28,481	1/1:23,0:22:0.47:1,0,0	1/1:15,0:15:8.36:44,8,0	1/1:31,0:30:2.36:7,2,0	0/1:19,0:15:14.65:103,0,15	0/0:42,0:42:76.29:0,76,2412	1/1:52,1:48:42.83:1648,43,0	1/1:14,1:15:14.21:233,14,0	0/0:43,0:41:99:0,100,2430	0/0:34,0:34:74.49:0,74,2037	1/1:22,0:22:3.79:12,4,0	0/1:30,2:31:5.80:450,0,6	0/1:16,0:16:2.72:3,0,73	0/1:17,0:17:63.65:308,0,64	1/1:16,0:16:7.18:381,7,0	1/1:16,0:12:3.49:394,3,0	0/1:22,2:24:0.42:277,0,0	1/1:57,0:51:2.78:127,3,0	1/1:24,0:24:2.66:7,3,0	0/0:28,0:28:62.97:0,63,1447	0/0:65,0:65:99:0,159,3716	0/1:20,1:20:18.78:64,0,19	1/1:44,1:42:43.74:1179,44,0	1/1:15,3:17:41.63:918,42,0	1/1:4,2:6:15.03:356,15,0
chr10	40947766	.	G	GCA	8253.77	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=5.607;DP=835;FS=0.343;HRun=0;HaplotypeScore=248.1344;InbreedingCoeff=0.9872;MQ=52.95;MQ0=5;MQRankSum=-9.576;QD=28.27;ReadPosRankSum=-1.108;VQSLOD=4.7040;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:57.10:0,57,741	1/1:5,8:13:18.05:306,18,0	0/0:45,0:25:43.48:0,43,501	0/0:47,0:18:40.44:0,40,451	0/0:32,0:32:51.12:0,51,663	0/0:21,0:21:36.08:0,36,450	0/0:32,0:32:48.16:0,48,624	1/1:8,18:26:60.19:960,60,0	0/0:41,0:41:99:0,108,1404	1/1:12,30:42:89.93:1442,90,0	1/1:4,12:16:11.94:204,12,0	0/0:46,0:45:99:0,117,1520	0/0:40,0:40:99:0,99,1260	0/0:30,0:29:26.83:0,27,351	1/1:2,19:21:48.16:815,48,0	0/0:26,0:25:30.06:0,30,372	0/0:32,0:32:76.13:0,76,977	1/1:4,5:9:15.05:242,15,0	1/1:10,12:21:42.12:674,42,0	1/1:5,14:19:24.08:407,24,0	1/1:22,30:48:51.27:811,51,0	0/0:20,0:20:30.04:0,30,357	0/0:27,0:27:75.23:0,75,960	0/0:59,1:60:99:0,147,1903	1/1:8,8:15:23.89:379,24,0	1/1:10,26:35:78.27:1313,78,0	1/1:6,10:15:30.57:498,31,0	1/1:0,4:4:12.04:203,12,0
chr10	40947806	.	ACACG	A	451.26	PASS	AB=0.995;AC=15;AF=0.268;AN=56;BaseQRankSum=8.309;DP=835;FS=2.618;HRun=0;HaplotypeScore=275.7686;InbreedingCoeff=0.1387;MQ=43.82;MQ0=30;MQRankSum=-6.942;QD=1.38;ReadPosRankSum=-2.267;VQSLOD=2.1320;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:50.76:0,51,1325	0/0:10,0:10:8.77:0,9,111	0/1:66,0:14:3.93:4,0,306	0/1:69,0:15:5.30:5,0,522	0/0:23,0:23:47.58:0,48,1184	0/0:17,0:17:30.10:0,30,807	0/0:35,0:35:63.20:0,63,1566	0/1:19,0:18:14.91:15,0,182	0/0:56,0:56:99:0,165,3380	0/1:31,0:31:99:205,0,188	1/1:22,1:23:1.77:24,2,0	0/0:47,0:44:99:0,120,2617	0/0:36,0:36:96.28:0,96,2373	0/0:27,0:26:28.69:0,29,640	0/0:19,0:19:6.26:0,6,29	0/0:19,0:18:30.10:0,30,731	0/0:36,0:36:83.98:0,84,1935	0/1:15,0:15:54.11:54,0,87	0/1:22,0:18:8.68:9,0,284	1/1:14,1:15:7.37:31,7,0	0/0:60,1:56:9.48:0,9,137	0/0:14,0:14:18.06:0,18,485	0/0:29,0:29:59.14:0,59,1588	0/0:50,0:50:99:0,123,3028	0/1:22,0:20:4.74:17,0,5	0/1:29,1:29:99:161,0,141	0/1:11,0:11:25.32:28,0,25	1/1:3,0:3:8.34:54,8,0
chr10	40947808	.	ACG	A	767.06	PASS	AB=0.892;AC=18;AF=0.321;AN=56;BaseQRankSum=8.493;DP=810;FS=0.000;HRun=0;HaplotypeScore=245.6835;InbreedingCoeff=0.1849;MQ=43.60;MQ0=31;MQRankSum=-5.224;QD=1.95;ReadPosRankSum=-3.754;VQSLOD=1.8373;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:54.18:0,54,981	0/0:6,0:10:15.29:0,15,119	0/1:64,0:14:3.93:4,0,238	0/1:70,0:16:3.04:3,0,344	0/0:23,0:23:13.24:0,13,788	0/0:17,0:17:29.97:0,30,576	0/0:34,0:34:63.20:0,63,1147	0/1:19,0:18:53.93:54,0,107	0/0:56,0:56:99:0,166,2577	0/1:24,4:28:99:227,0,104	1/1:13,9:22:8.38:59,8,0	0/0:46,0:43:79.42:0,79,1843	0/0:34,0:34:96.26:0,96,1728	0/0:26,0:25:5.68:0,6,444	0/1:11,6:17:12.20:12,0,12	0/0:19,0:18:30.10:0,30,546	0/0:35,0:35:83.87:0,84,1404	0/1:13,2:15:58.02:66,0,58	0/1:20,1:17:20.98:21,0,204	1/1:8,7:15:14.82:60,15,0	0/1:47,10:53:2.10:2,0,76	0/0:13,0:13:18.06:0,18,346	0/0:29,0:29:21.86:0,22,1085	0/0:47,0:47:94.52:0,95,2166	1/1:13,8:19:2.35:41,2,0	0/1:24,6:29:73:295,0,73	0/1:8,3:11:5.09:34,0,5	1/1:2,1:3:8.34:55,8,0
chr10	40947812	.	ACAC	A	2124.71	PASS	AB=0.966;AC=22;AF=0.393;AN=56;BaseQRankSum=11.819;DP=780;FS=0.466;HRun=0;HaplotypeScore=243.0284;InbreedingCoeff=0.6074;MQ=43.29;MQ0=30;MQRankSum=-10.083;QD=8.43;ReadPosRankSum=-3.893;VQSLOD=2.5467;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:44.98:0,45,769	1/1:10,0:10:3.64:23,4,0	0/0:62,0:12:29.42:0,29,446	0/0:72,0:15:35.96:0,36,520	0/0:22,0:22:44.85:0,45,935	0/0:16,0:16:30.06:0,30,645	0/0:33,0:33:57.97:0,58,1120	0/1:14,0:13:50.23:115,0,50	0/0:53,0:53:99:0,123,2965	0/1:23,3:26:57.52:566,0,58	1/1:21,0:21:2.47:29,2,0	0/0:46,0:43:99:0,105,2252	0/0:34,0:34:90.76:0,91,1942	0/0:25,0:24:26.59:0,27,510	1/1:16,0:16:8.63:87,9,0	0/0:18,0:17:23.99:0,24,448	0/0:34,0:34:74.36:0,74,1408	1/1:11,4:15:20.01:313,20,0	0/1:18,0:15:40.46:40,0,131	1/1:14,0:14:18.02:179,18,0	1/1:39,15:50:14.59:170,15,0	0/0:12,0:12:18.06:0,18,380	0/0:28,0:28:66.18:0,66,1349	0/0:47,0:47:99:0,120,2480	1/1:20,0:19:11.96:128,12,0	0/1:28,1:28:16.87:460,0,17	1/1:12,0:11:14.12:129,14,0	1/1:3,0:3:6.02:85,6,0
chr10	40947814	.	AC	A	1607.77	PASS	AB=0.839;AC=22;AF=0.393;AN=56;BaseQRankSum=10.859;DP=767;FS=2.182;HRun=2;HaplotypeScore=223.1660;InbreedingCoeff=0.5964;MQ=43.16;MQ0=31;MQRankSum=-9.190;QD=6.73;ReadPosRankSum=-3.149;VQSLOD=-0.4074;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:44.98:0,45,565	1/1:10,0:10:3.64:23,4,0	0/0:63,0:12:28.49:0,28,339	0/0:70,0:14:36.03:0,36,433	0/0:22,0:22:45.04:0,45,649	0/0:16,0:16:29.96:0,30,444	0/0:34,0:34:57.96:0,58,780	0/1:12,1:12:26.95:126,0,27	0/0:54,0:54:99:0,111,2031	0/1:18,7:25:18.06:370,0,18	1/1:8,12:20:2.69:29,3,0	0/0:44,0:41:99:0,105,1542	0/0:35,0:35:90.76:0,91,1319	0/0:24,0:23:26.79:0,27,360	1/1:10,6:16:8.76:87,9,0	0/0:18,0:17:23.99:0,24,310	0/0:33,0:33:74.29:0,74,993	1/1:12,2:14:14.36:148,14,0	0/1:15,2:15:29.37:29,0,116	1/1:6,7:13:17.78:169,18,0	1/1:36,17:48:7.27:144,7,0	0/0:13,0:13:18.06:0,18,265	0/0:29,0:29:69.13:0,69,970	0/0:47,0:47:99:0,123,1767	1/1:9,11:19:11.73:127,12,0	0/1:16,8:23:13.99:353,0,14	1/1:8,3:10:11.59:127,12,0	1/1:1,2:3:6.02:71,6,0
chr10	40947815	.	C	CG	1952.53	PASS	AB=0.788;AC=21;AF=0.375;AN=56;BaseQRankSum=11.342;DP=757;FS=0.459;HRun=0;HaplotypeScore=230.1348;InbreedingCoeff=0.6427;MQ=43.15;MQ0=33;MQRankSum=-10.483;QD=8.88;ReadPosRankSum=-4.744;VQSLOD=2.6551;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:47.65:0,48,552	0/0:8,0:8:1.16:0,1,14	0/0:63,0:12:29.36:0,29,325	0/0:69,0:13:36.10:0,36,442	0/0:22,0:22:45.62:0,46,626	0/0:17,0:17:4.85:0,5,391	0/0:35,0:35:63:0,63,775	0/1:6,6:10:23.91:208,0,24	0/0:54,0:54:99:0,129,1939	0/1:17,7:24:22.88:338,0,23	1/1:16,2:19:2.75:47,3,0	0/0:44,0:41:99:0,105,1446	0/0:35,0:35:90.76:0,91,1241	0/0:24,0:23:26.92:0,27,342	1/1:10,3:13:9.68:143,10,0	0/0:18,0:17:26.94:0,27,311	0/0:34,0:34:24.72:0,25,882	1/1:10,1:14:11.43:159,11,0	0/1:15,1:14:72.27:72,0,146	1/1:9,3:12:18.83:237,19,0	1/1:47,1:47:6.25:96,6,0	0/0:13,0:13:18.06:0,18,251	0/0:27,0:27:69.21:0,69,935	0/0:46,0:46:99:0,123,1675	1/1:14,3:18:15.85:194,16,0	1/1:18,5:23:22.10:477,22,0	1/1:7,3:10:14.40:127,14,0	1/1:2,1:3:5.98:53,6,0
chr10	40947819	.	ACACACATG	A	1343.05	PASS	AB=0.977;AC=17;AF=0.304;AN=56;BaseQRankSum=9.470;DP=733;FS=2.010;HRun=0;HaplotypeScore=271.4521;InbreedingCoeff=0.4655;MQ=42.34;MQ0=35;MQRankSum=-9.557;QD=6.68;ReadPosRankSum=-3.361;VQSLOD=1.9905;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:26.03:0,26,462	0/1:6,0:6:0.01:0,0,0	0/0:63,0:13:24.25:0,24,300	0/0:67,0:13:4.84:0,5,271	0/0:21,0:21:32.90:0,33,680	0/0:17,0:17:24.55:0,25,541	0/0:32,0:32:42.34:0,42,836	0/0:11,0:9:2.61:0,3,104	0/0:47,0:47:99:0,134,4915	0/1:26,0:25:27.55:418,0,28	0/0:18,0:19:0.21:0,0,1	0/0:40,0:38:99:0,102,3755	0/0:32,0:32:81.13:0,81,2885	0/0:24,0:23:14.67:0,15,279	1/1:9,3:13:2.89:16,3,0	0/0:17,0:16:11.67:0,12,271	0/0:32,0:32:62.25:0,62,1006	0/1:14,1:15:57.64:200,0,58	0/1:15,0:13:4.46:168,0,4	1/1:11,0:11:1.78:6,2,0	1/1:58,0:52:2.63:60,3,0	0/0:9,0:9:15:0,15,344	0/0:27,0:27:63.21:0,63,2155	0/0:45,0:45:99:0,109,3792	0/1:17,1:17:2.45:2,0,16	1/1:24,0:24:20.47:503,20,0	1/1:10,0:10:8.29:98,8,0	1/1:3,0:3:3:25,3,0
chr10	40947824	.	CATG	C	1299.42	PASS	AB=0.705;AC=16;AF=0.286;AN=56;BaseQRankSum=9.867;DP=673;FS=5.832;HRun=0;HaplotypeScore=209.0474;InbreedingCoeff=0.3098;MQ=42.77;MQ0=32;MQRankSum=-8.588;QD=7.26;ReadPosRankSum=-3.338;VQSLOD=2.2541;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:26.09:0,26,516	0/1:1,5:6:0.03:0,0,0	0/0:56,0:12:22.90:0,23,417	0/0:64,0:10:17.30:0,17,275	0/0:18,0:18:35.95:0,36,771	0/0:15,0:15:24.19:0,24,462	0/0:29,0:30:44.70:0,45,865	0/1:6,0:5:12.77:13,0,68	0/0:45,0:45:99:0,134,3196	0/1:13,8:20:99:520,0,148	0/0:5,10:15:0.16:0,0,0	0/0:41,0:39:99:0,111,2642	0/0:34,0:34:96.79:0,97,2261	0/0:24,0:23:17.55:0,18,363	0/1:4,7:11:0:0,0,0	0/0:17,0:16:17.31:0,17,307	0/0:30,0:30:62.46:0,62,1010	0/1:14,1:15:82.65:83,0,206	0/1:6,1:10:31.70:52,0,32	1/1:3,7:10:4.74:36,5,0	1/1:36,12:50:5.07:39,5,0	0/0:9,0:9:14.93:0,15,333	0/0:25,0:25:69.21:0,69,1536	0/0:45,0:45:99:0,118,2829	0/1:5,7:12:22.47:22,0,23	0/1:8,9:19:32.25:496,0,32	1/1:3,3:8:11.71:140,12,0	1/1:0,1:1:3.01:54,3,0
chr10	40947825	.	ATG	A	657.89	PASS	AB=0.920;AC=18;AF=0.321;AN=56;BaseQRankSum=9.828;DP=655;FS=0.000;HRun=0;HaplotypeScore=196.5750;InbreedingCoeff=0.3306;MQ=43.07;MQ0=33;MQRankSum=-8.987;QD=2.95;ReadPosRankSum=-1.312;VQSLOD=2.3571;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:24.58:0,25,241	0/1:5,0:5:0.06:0,0,0	0/0:59,0:12:23.46:0,23,247	0/1:58,3:10:68.54:69,0,132	0/0:17,0:17:31.97:0,32,383	0/0:15,0:15:0.89:0,1,172	0/0:29,0:29:36.80:0,37,395	0/0:5,0:4:3.01:0,3,61	0/0:46,0:46:99:0,120,2522	0/1:14,2:16:41.98:191,0,42	0/0:11,0:11:0.20:0,0,0	0/0:44,0:42:99:0,117,2137	0/0:35,0:35:96.05:0,96,1749	0/0:24,0:23:14.33:0,14,182	1/1:10,0:10:2.90:16,3,0	0/0:15,0:14:5.63:0,6,127	0/0:29,0:29:38.30:0,38,363	0/1:11,3:14:63.40:140,0,63	0/1:10,0:10:4.74:148,0,5	1/1:7,1:8:1.96:6,2,0	1/1:53,3:50:4.20:57,4,0	0/0:10,0:10:14.57:0,15,170	0/0:23,1:24:62.61:0,63,1096	0/0:45,0:45:99:0,118,2136	1/1:10,2:12:1.80:7,2,0	0/1:17,1:18:9.27:125,0,9	1/1:7,1:7:6.96:32,7,0	1/1:1,0:1:2.92:17,3,0
chr10	40947827	.	GCA	G	1239.51	PASS	AB=0.928;AC=22;AF=0.393;AN=56;BaseQRankSum=4.294;DP=691;FS=19.564;HRun=0;HaplotypeScore=206.9615;InbreedingCoeff=0.4898;MQ=42.33;MQ0=37;MQRankSum=0.123;QD=4.36;ReadPosRankSum=-0.131;VQSLOD=1.0851;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:16,6:22:18.02:196,18,0	0/1:7,0:7:0.01:0,0,0	0/0:57,0:10:8.85:0,9,78	0/0:62,0:9:10.35:0,10,106	1/1:9,7:16:14.66:127,15,0	1/1:5,10:15:17.99:203,18,0	1/1:8,20:28:22.77:268,23,0	0/0:9,0:7:8.39:0,8,72	0/0:46,1:47:87.38:0,87,1827	0/0:21,0:18:20.44:0,20,227	0/1:16,0:16:0.11:0,0,0	0/0:43,0:41:96.33:0,96,1567	0/0:34,1:35:49.74:0,50,1295	1/1:5,17:21:6.01:61,6,0	0/0:15,0:15:3.89:0,4,38	1/1:3,12:14:3.01:37,3,0	1/1:9,20:29:6.05:369,6,0	0/1:14,0:14:38.69:39,0,57	0/0:12,0:12:6.88:0,7,60	0/0:14,0:14:9.03:0,9,106	1/1:52,0:50:0.62:8,1,0	0/1:5,4:9:29.38:90,0,29	0/1:23,1:24:14.25:14,0,763	0/0:47,0:47:93.29:0,93,1465	0/0:18,0:18:5.64:0,6,64	0/0:18,0:20:15.57:0,16,171	0/1:10,0:10:3.32:3,0,16	0/0:4,0:4:11.46:0,11,104
chr10	40947831	.	A	ATG	70.65	PASS	AB=0.970;AC=7;AF=0.125;AN=56;BaseQRankSum=5.513;DP=708;FS=2.308;HRun=0;HaplotypeScore=227.8120;InbreedingCoeff=-0.0099;MQ=41.39;MQ0=36;MQRankSum=-5.240;QD=0.54;ReadPosRankSum=-0.885;VQSLOD=2.6988;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:21.81:0,22,222	0/0:9,0:9:2.41:0,2,10	0/0:56,0:9:6.05:0,6,155	0/0:60,0:7:18:0,18,219	0/0:14,0:14:23.66:0,24,291	0/0:15,0:15:23.35:0,23,241	0/0:27,0:27:34.59:0,35,354	0/0:12,0:9:14.21:0,14,102	0/0:49,0:49:99:0,146,2240	0/0:25,0:22:44.73:0,45,547	1/1:17,0:17:0.15:0,0,0	0/0:44,0:42:99:0,111,1771	0/0:36,0:36:98.96:0,99,1544	0/0:22,0:21:8.70:0,9,101	0/0:19,0:19:8.75:0,9,87	0/0:15,0:14:11.94:0,12,157	0/0:31,0:31:54.80:0,55,487	0/1:13,1:14:12.70:13,0,206	0/1:10,0:10:52.59:56,0,53	0/0:17,0:17:11.68:0,12,136	0/1:51,5:50:15.55:16,0,27	0/0:9,0:9:11.86:0,12,136	0/0:26,0:26:66.09:0,66,1001	0/0:47,0:47:99:0,123,1946	0/0:20,0:20:11.89:0,12,149	0/1:24,0:23:89.75:90,0,272	0/1:9,0:8:6.67:7,0,39	0/0:4,0:4:11.52:0,12,121
chr10	40947841	.	ACG	A	662.35	PASS	AB=0.937;AC=21;AF=0.375;AN=56;BaseQRankSum=6.548;DP=677;FS=22.124;HRun=0;HaplotypeScore=220.7806;InbreedingCoeff=0.3988;MQ=41.09;MQ0=25;MQRankSum=-2.393;QD=2.50;ReadPosRankSum=-0.536;VQSLOD=1.1987;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:9,2:11:17.42:140,17,0	0/1:12,0:12:11.72:24,0,12	0/0:44,0:8:8.23:0,8,58	0/0:48,0:8:0.05:0,0,105	1/1:11,0:11:5.95:31,6,0	1/1:12,1:13:17.09:103,17,0	1/1:22,1:23:22.98:131,23,0	0/1:14,0:10:4.72:5,0,85	0/0:47,0:47:97.79:0,98,1985	0/0:26,0:23:51.14:0,51,499	0/1:21,0:20:0.17:1,0,0	0/0:43,0:42:99:0,120,1897	0/0:38,0:38:95.35:0,95,1589	1/1:19,0:18:2.95:19,3,0	0/1:22,0:21:6.97:7,0,60	1/1:12,0:11:2.92:17,3,0	0/1:24,2:26:1.83:181,0,2	0/1:11,1:17:99:108,0,102	0/0:12,1:12:24.73:0,25,197	0/0:18,0:18:15.40:0,15,180	1/1:54,0:50:2.18:29,2,0	0/1:7,1:8:28.29:38,0,28	0/0:26,0:26:34.32:0,34,925	0/0:46,0:46:99:0,117,1845	0/0:19,0:21:10.48:0,10,104	0/0:27,0:26:39.63:0,40,378	0/0:11,0:10:4.35:0,4,51	0/0:4,0:4:9.50:0,9,128
chr10	40947846	.	C	CAT	79.20	PASS	AB=0.951;AC=6;AF=0.107;AN=56;BaseQRankSum=4.689;DP=672;FS=4.658;HRun=0;HaplotypeScore=220.7562;InbreedingCoeff=0.1540;MQ=40.71;MQ0=25;MQRankSum=-4.910;QD=0.93;ReadPosRankSum=-0.509;VQSLOD=2.5285;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:8:14.87:0,15,153	0/0:13,0:13:6.41:0,6,69	0/0:38,0:7:11.85:0,12,128	0/0:47,0:9:18.51:0,19,263	0/0:8,0:8:5.75:0,6,68	0/0:10,0:10:17.73:0,18,196	0/0:20,0:20:23.87:0,24,280	0/1:15,1:11:18.90:19,0,92	0/0:46,0:46:99:0,128,1883	0/0:27,0:24:65.86:0,66,800	1/1:22,0:21:0.36:1,0,0	0/0:47,0:47:99:0,132,2029	0/0:39,0:39:99:0,108,1709	0/1:18,0:17:0.13:0,0,0	0/0:24,0:23:7.46:0,7,81	0/0:11,0:10:5.91:0,6,68	0/0:23,0:23:35.42:0,35,378	0/0:19,0:18:31.72:0,32,297	0/0:15,1:14:21.07:0,21,200	0/0:20,0:20:15.82:0,16,155	0/0:53,2:49:0.03:0,0,1	0/0:7,0:7:8.92:0,9,113	0/0:23,0:23:65.87:0,66,1034	0/0:47,0:47:99:0,120,1803	0/0:27,0:26:12.44:0,12,148	0/1:21,4:24:99:144,0,333	0/0:10,1:10:2.20:0,2,56	0/1:4,0:4:10.53:11,0,62
chr10	40947849	.	ACG	A	1559.90	PASS	AB=0.967;AC=24;AF=0.429;AN=56;BaseQRankSum=10.270;DP=673;FS=5.410;HRun=0;HaplotypeScore=214.6992;InbreedingCoeff=0.1400;MQ=40.55;MQ0=25;MQRankSum=-8.088;QD=4.44;ReadPosRankSum=-1.094;VQSLOD=2.0043;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:8,0:8:18.04:18,0,26	0/1:15,0:15:12.49:12,0,28	0/0:41,0:8:14.84:0,15,216	0/0:45,0:11:32.60:0,33,376	0/0:8,0:8:2.55:0,3,16	0/1:7,0:7:5.77:6,0,43	0/0:18,0:18:0.83:0,1,74	1/1:13,4:10:16.89:198,17,0	0/0:47,0:47:99:0,120,2182	1/1:23,4:23:39.96:422,40,0	0/1:21,1:21:0.17:1,0,0	0/0:48,0:48:99:0,135,2284	0/0:38,0:38:99:0,107,1720	0/1:17,0:16:0:0,0,0	1/1:20,5:24:0.67:8,1,0	0/0:11,0:10:5.98:0,6,59	0/1:19,0:19:6.33:6,0,94	1/1:17,1:17:28.25:271,28,0	0/1:14,1:13:53.11:103,0,53	0/1:20,0:20:13.34:27,0,13	1/1:55,5:54:2.96:32,3,0	0/1:7,0:7:10.84:11,0,13	0/0:23,0:23:65.89:0,66,1200	0/0:43,0:43:99:0,114,1969	0/1:25,3:27:18.50:35,0,19	0/1:23,7:28:40.12:431,0,40	1/1:9,3:11:6.15:132,6,0	0/1:4,0:4:4.49:11,0,4
chr10	40947850	.	CGCACACACAT	C	621.84	PASS	AB=0.947;AC=14;AF=0.250;AN=56;BaseQRankSum=8.490;DP=650;FS=9.416;HRun=0;HaplotypeScore=260.9406;InbreedingCoeff=-0.0454;MQ=40.88;MQ0=24;MQRankSum=-7.904;QD=2.99;ReadPosRankSum=1.538;VQSLOD=1.2159;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:5,2:7:25.84:145,0,26	1/1:15,0:15:16.99:181,17,0	0/0:38,0:8:14.82:0,15,294	0/0:45,0:11:32.82:0,33,789	0/0:6,0:6:2.71:0,3,17	0/1:6,1:7:42.98:67,0,43	0/1:17,1:18:68.33:69,0,68	0/1:17,0:10:42.12:42,0,77	0/0:49,0:49:99:0,140,4653	0/0:26,0:23:36.21:0,36,685	0/1:22,0:21:0.19:0,0,0	0/0:48,0:48:99:0,138,4495	0/0:38,0:38:99:0,107,3614	0/1:17,0:16:0:0,0,0	0/0:25,0:24:8.54:0,9,147	0/0:10,0:9:5.93:0,6,120	0/1:17,2:19:46.50:47,0,93	0/1:14,0:13:84.52:96,0,85	0/0:14,0:12:12.99:0,13,104	0/0:19,0:19:15.52:0,16,314	0/1:50,0:43:27.04:27,0,32	0/1:5,1:6:13.08:65,0,13	0/0:23,0:23:66.08:0,66,2652	0/0:44,0:44:99:0,115,4002	0/0:28,0:27:14.54:0,15,221	0/0:29,0:27:5.61:0,6,411	0/1:11,0:10:27.24:27,0,88	0/1:5,0:5:4.11:4,0,133
chr10	40947851	.	G	GCA	3503.57	PASS	AB=0.855;AC=29;AF=0.558;AN=52;BaseQRankSum=11.589;DP=663;FS=5.159;HRun=0;HaplotypeScore=204.2265;InbreedingCoeff=0.6943;MQ=40.86;MQ0=24;MQRankSum=-8.641;QD=10.58;ReadPosRankSum=-2.884;VQSLOD=2.7347;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:6:1.72:0,2,4	0/1:14,0:14:8.13:8,0,40	0/0:38,0:7:15.04:0,15,180	0/0:45,0:12:26.18:0,26,287	./.	0/0:6,0:6:0.47:0,0,1	1/1:15,0:15:0.44:1,0,0	1/1:11,6:11:24:313,24,0	0/0:51,0:51:99:0,125,1536	1/1:14,14:25:63.14:934,63,0	0/1:5,17:21:0:0,0,0	0/0:48,0:48:99:0,124,1546	0/0:38,0:38:89.92:0,90,1149	./.	1/1:11,15:25:6.90:103,7,0	0/0:10,0:9:3.01:0,3,39	1/1:15,0:15:4.21:23,4,0	1/1:12,3:14:10.12:179,10,0	1/1:9,7:16:20.95:223,21,0	1/1:3,18:22:15.05:249,15,0	1/1:43,10:46:2.85:17,3,0	0/1:5,0:5:0:0,0,0	0/0:23,0:23:65.89:0,66,834	0/0:44,0:44:99:0,102,1268	1/1:12,18:29:11.18:196,11,0	1/1:22,8:28:65.88:845,66,0	1/1:11,4:14:14.97:187,15,0	1/1:1,4:5:15.04:226,15,0
chr10	40947854	.	CACACAT	C	671.55	PASS	AB=1.000;AC=18;AF=0.346;AN=52;BaseQRankSum=9.245;DP=681;FS=8.305;HRun=0;HaplotypeScore=245.1820;InbreedingCoeff=0.2860;MQ=40.93;MQ0=22;MQRankSum=-9.057;QD=3.20;ReadPosRankSum=1.010;VQSLOD=1.1933;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:6,0:6:6.91:108,7,0	1/1:10,5:15:17.09:171,17,0	0/0:38,0:8:18.04:0,18,327	0/0:50,0:12:30.10:0,30,778	./.	1/1:5,1:6:2.99:53,3,0	1/1:14,1:15:3.01:56,3,0	0/1:19,0:12:76.49:76,0,100	0/0:53,0:53:99:0,147,4019	0/0:29,0:26:19.45:0,19,638	0/0:23,0:22:0.29:0,0,1	0/0:47,0:47:99:0,131,3557	0/0:38,0:38:96.33:0,96,2866	./.	0/0:26,0:25:11.65:0,12,163	0/0:10,0:9:2.84:0,3,82	1/1:13,1:14:5.47:48,5,0	0/1:15,0:14:58.15:181,0,58	0/1:19,0:17:24:24,0,113	0/0:24,0:24:20.74:0,21,317	0/1:58,0:51:7.66:8,0,32	1/1:5,0:5:3.01:47,3,0	0/0:23,0:23:66.16:0,66,2035	0/0:44,0:44:99:0,106,3062	0/0:30,0:29:3.89:0,4,213	0/1:30,0:27:29.93:30,0,409	0/0:14,0:14:7.92:0,8,180	0/1:8,0:8:31.51:32,0,243
chr10	40947856	.	CACAT	C	309.79	PASS	AB=0.978;AC=17;AF=0.327;AN=52;BaseQRankSum=7.031;DP=632;FS=18.294;HRun=0;HaplotypeScore=214.2392;InbreedingCoeff=0.1776;MQ=41.70;MQ0=21;MQRankSum=-5.644;QD=1.46;ReadPosRankSum=-1.175;VQSLOD=1.0735;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,0:3:6.78:38,7,0	1/1:15,0:15:5.91:26,6,0	0/0:39,0:9:20.92:0,21,261	0/0:49,0:11:29.96:0,30,506	./.	1/1:2,0:2:2.97:20,3,0	1/1:5,0:5:2.98:21,3,0	0/1:19,1:13:93.66:104,0,94	0/0:52,0:52:99:0,150,3012	0/0:30,0:27:34.70:0,35,483	0/0:23,0:22:0.17:0,0,0	0/0:48,0:48:99:0,127,2598	0/0:40,0:40:92.87:0,93,2114	./.	0/0:26,0:25:10.75:0,11,97	0/0:3,0:2:3.01:0,3,45	0/0:4,0:4:0.34:0,0,5	0/1:15,0:14:62.53:72,0,63	0/1:18,0:16:75.12:75,0,78	0/0:24,0:24:0.43:0,0,188	0/1:60,2:57:10.24:10,0,12	1/1:1,0:1:2.92:17,3,0	0/0:23,0:23:66.18:0,66,1485	0/0:44,0:44:99:0,103,2349	0/1:31,0:30:5.31:5,0,136	0/1:29,2:28:49.69:50,0,364	0/0:14,0:14:22.31:0,22,145	0/1:8,0:8:20.18:20,0,152
chr10	40947890	.	CGA	C	276.23	PASS	AC=2;AF=0.038;AN=52;BaseQRankSum=4.498;DP=732;FS=14.866;HRun=0;HaplotypeScore=246.6151;InbreedingCoeff=0.5309;MQ=47.55;MQ0=13;MQRankSum=-3.450;QD=15.35;ReadPosRankSum=-1.939;VQSLOD=1.8361;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:3,0:3:4.99:0,5,15	1/1:13,5:18:27.08:369,27,0	0/0:50,1:24:12.96:0,13,876	0/0:61,0:27:57.02:0,57,926	./.	0/0:2,0:2:1.08:0,1,7	0/0:3,0:3:3.01:0,3,40	0/0:35,0:32:75.03:0,75,1453	0/0:54,0:54:99:0,150,2796	0/0:43,1:42:86.73:0,87,2251	0/0:21,0:20:27.01:0,27,464	0/0:48,0:48:99:0,138,2690	0/0:40,0:40:99:0,111,2219	./.	0/0:19,1:19:26.88:0,27,414	0/0:3,0:3:9.03:0,9,149	0/0:3,0:3:3.01:0,3,40	0/0:18,0:17:38.12:0,38,607	0/0:21,0:18:45.14:0,45,846	0/0:30,0:30:57.01:0,57,947	0/0:100,0:94:99:0,104,1463	0/0:1,0:1:2.60:0,3,10	0/0:21,1:22:63.69:0,64,1235	0/0:44,0:44:99:0,123,2301	0/0:29,0:28:45.06:0,45,774	0/0:36,0:32:84.22:0,84,1617	0/0:16,0:16:39.13:0,39,716	0/0:8,0:8:18.06:0,18,365
chr10	40947895	.	ATG	A	191.51	PASS	AC=2;AF=0.040;AN=50;BaseQRankSum=4.716;DP=729;FS=15.671;HRun=0;HaplotypeScore=247.1255;InbreedingCoeff=0.5442;MQ=47.86;MQ0=12;MQRankSum=-4.208;QD=10.64;ReadPosRankSum=-1.185;VQSLOD=1.6023;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:3,0:3:2.96:0,3,19	1/1:4,14:18:15.21:279,15,0	0/0:53,0:25:65.32:0,65,1032	0/0:59,0:26:74.40:0,74,1172	./.	0/0:2,0:2:2.22:0,2,7	0/0:3,0:3:3.01:0,3,36	0/0:35,0:32:78.04:0,78,1515	0/0:53,0:53:99:0,159,3044	0/0:45,1:44:95.70:0,96,2325	0/0:21,0:20:35.91:0,36,630	0/0:51,0:51:99:0,144,2710	0/0:40,0:40:99:0,114,2221	./.	0/0:18,0:18:32.98:0,33,479	0/0:3,0:3:9.02:0,9,147	0/0:3,0:3:3:0,3,25	0/0:16,1:16:9.54:0,10,656	0/0:24,0:20:51.96:0,52,1068	0/0:28,0:28:57.15:0,57,1059	0/0:99,0:94:99:0,163,2215	./.	0/0:22,0:22:59.71:0,60,1137	0/0:43,0:43:99:0,120,2413	0/0:29,0:28:47.74:0,48,886	0/0:35,0:31:81.20:0,81,1600	0/0:16,0:16:38.94:0,39,693	0/0:6,0:6:18.06:0,18,365
chr10	40947897	.	G	GTA	59.57	PASS	AB=0.875;AC=8;AF=0.160;AN=50;BaseQRankSum=5.982;DP=729;FS=6.196;HRun=0;HaplotypeScore=257.0673;InbreedingCoeff=0.4981;MQ=48.74;MQ0=10;MQRankSum=-4.166;QD=1.99;ReadPosRankSum=-2.065;VQSLOD=1.3598;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:0,3:3:2.74:0,3,12	0/1:21,0:21:4.82:87,0,5	0/0:51,0:22:45.19:0,45,675	0/0:59,0:26:60.91:0,61,745	./.	1/1:1,1:2:0.47:1,0,0	1/1:1,1:3:3.83:20,4,0	0/0:34,0:33:75.19:0,75,1122	0/0:53,0:53:99:0,159,2341	0/0:48,0:46:99:0,109,1778	0/0:22,0:21:36.02:0,36,518	0/0:50,0:50:99:0,144,2080	0/0:41,0:41:99:0,111,1726	./.	0/0:19,0:19:32.18:0,32,401	0/1:2,1:3:29.32:29,0,88	1/1:0,1:1:3.01:36,3,0	0/0:17,0:16:23.43:0,23,494	0/0:23,0:21:52.44:0,52,847	0/0:28,0:28:56.96:0,57,879	0/0:99,0:95:99:0,165,2072	./.	0/0:21,0:21:59.80:0,60,901	0/0:44,0:44:99:0,120,1920	0/0:29,0:28:47.86:0,48,715	0/0:35,0:31:81.08:0,81,1248	0/0:14,0:14:39.06:0,39,573	0/0:6,0:6:18.06:0,18,292
chr10	40947900	.	C	CGCAT	53.40	PASS	AB=0.750;AC=8;AF=0.160;AN=50;BaseQRankSum=3.270;DP=739;FS=13.138;HRun=0;HaplotypeScore=288.1882;InbreedingCoeff=0.5394;MQ=49.67;MQ0=9;MQRankSum=-4.000;QD=4.11;ReadPosRankSum=-2.790;VQSLOD=0.6912;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:0,3:3:3:26,3,0	0/0:20,0:20:29.35:0,29,245	0/0:53,0:25:57.87:0,58,973	0/0:56,0:24:58.79:0,59,1008	./.	1/1:1,1:2:3:26,3,0	0/1:2,1:3:2.69:3,0,15	0/0:36,0:36:39.96:0,40,1435	0/0:53,0:53:99:0,156,3044	0/0:48,0:46:99:0,126,2307	0/0:22,0:21:35.99:0,36,625	0/0:50,0:50:99:0,141,2717	0/0:42,0:42:99:0,120,2277	./.	0/0:23,0:22:33.15:0,33,498	0/1:2,1:3:54.02:54,0,116	1/1:1,1:2:2.81:61,3,0	0/0:16,0:15:24.10:0,24,682	0/0:25,0:23:55.10:0,55,1148	0/0:30,0:30:56.98:0,57,1080	0/0:98,0:96:99:0,166,2519	./.	0/0:20,0:20:57.18:0,57,1118	0/0:46,0:47:99:0,120,2456	0/0:30,0:29:48:0,48,907	0/0:35,0:31:84.16:0,84,1651	0/0:14,0:14:39.06:0,39,715	0/0:6,0:6:18.06:0,18,377
chr10	40947914	.	CAT	C	97.14	PASS	AB=0.857;AC=8;AF=0.167;AN=48;BaseQRankSum=3.505;DP=738;FS=1.834;HRun=0;HaplotypeScore=265.0826;InbreedingCoeff=0.4994;MQ=50.76;MQ0=11;MQRankSum=-3.373;QD=1.70;ReadPosRankSum=-6.788;VQSLOD=0.9688;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:0,1:1:3.01:45,3,0	0/0:22,0:22:5.17:0,5,190	0/0:57,0:31:61.77:0,62,1046	0/0:48,0:25:11.75:0,12,832	./.	1/1:0,1:1:3.01:44,3,0	./.	0/0:31,0:29:15.17:0,15,416	0/0:49,0:49:99:0,147,2679	0/1:48,0:46:9.76:10,0,859	0/0:23,0:22:35.97:0,36,331	0/0:48,0:48:99:0,138,2609	0/0:45,0:45:99:0,129,2443	./.	0/0:19,0:18:30.02:0,30,244	0/1:3,2:5:36.31:36,0,106	1/1:0,2:2:6.02:83,6,0	0/0:13,0:12:30.06:0,30,305	0/0:29,0:27:78.40:0,78,688	0/0:34,0:34:57:0,57,525	0/0:102,0:99:99:0,146,1377	./.	0/0:20,0:20:35.90:0,36,933	0/0:48,1:49:99:0,132,2475	0/0:35,0:34:27.93:0,28,397	0/0:32,0:31:46.49:0,46,708	0/0:16,0:16:27.05:0,27,372	0/0:6,0:6:14.99:0,15,130
chr10	40947937	.	ACATG	A	56.41	PASS	AB=0.957;AC=7;AF=0.130;AN=54;BaseQRankSum=5.278;DP=711;FS=11.405;HRun=0;HaplotypeScore=290.4693;InbreedingCoeff=0.2440;MQ=47.34;MQ0=15;MQRankSum=-4.664;QD=0.92;ReadPosRankSum=-7.777;VQSLOD=-0.6373;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:10,0:10:6.08:6,0,28	0/0:24,0:24:17.77:0,18,623	0/0:37,0:19:47.16:0,47,817	0/0:38,0:20:42.06:0,42,885	0/1:1,0:1:0:0,0,0	0/0:6,0:6:10.79:0,11,73	1/1:3,0:3:5.14:45,5,0	0/1:23,2:20:37.98:38,0,656	0/0:53,0:53:99:0,157,3828	0/0:44,0:41:99:0,112,1871	0/0:22,1:22:48.16:0,48,765	0/0:44,0:44:99:0,120,2902	0/0:39,0:39:99:0,108,2697	0/0:15,0:15:16.48:0,16,232	0/0:17,0:17:24.02:0,24,448	0/0:8,0:8:18.04:0,18,297	0/1:4,0:4:6.13:6,0,47	0/1:15,3:17:73.10:73,0,409	0/0:22,0:17:39.13:0,39,659	0/0:31,1:32:71.99:0,72,1196	0/0:94,4:95:22.23:0,22,1004	./.	0/0:23,0:23:56.97:0,57,1414	0/0:46,0:46:99:0,117,2726	0/0:30,0:29:38.86:0,39,861	0/0:25,1:26:27.96:0,28,1081	0/0:16,1:17:13.41:0,13,614	0/0:8,0:8:21.06:0,21,313
chr10	40947941	.	G	GCA	8972.33	PASS	AB=0.664;AC=32;AF=0.593;AN=54;BaseQRankSum=14.503;DP=694;FS=8.324;HRun=0;HaplotypeScore=238.1224;InbreedingCoeff=0.5057;MQ=45.35;MQ0=15;MQRankSum=-8.786;QD=20.96;ReadPosRankSum=-3.149;VQSLOD=3.2702;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,2:10:0.02:36,0,0	0/1:11,13:24:2.49:489,0,2	0/0:34,0:16:20.49:0,20,243	0/0:33,0:13:26.16:0,26,279	0/0:1,0:1:0:0,0,0	0/1:2,4:6:0.83:78,0,1	1/1:2,1:3:0.24:34,0,0	1/1:21,4:19:24:320,24,0	0/0:55,0:55:99:0,123,1568	1/1:21,25:43:92.08:1491,92,0	1/1:12,11:22:45.13:731,45,0	0/0:41,0:41:99:0,102,1303	0/0:37,0:37:93.08:0,93,1183	1/1:9,6:15:17.88:185,18,0	1/1:3,14:17:23.73:404,24,0	0/1:4,4:8:23.93:125,0,24	1/1:2,2:4:6.02:99,6,0	0/1:8,9:17:5.50:471,0,6	1/1:14,5:14:24.08:405,24,0	1/1:10,22:32:27.41:1022,27,0	1/1:48,49:95:69.82:1131,70,0	./.	0/0:20,0:20:54.16:0,54,681	0/0:44,0:44:90.29:0,90,1158	1/1:12,17:28:13.88:746,14,0	0/1:18,9:27:5.53:583,0,6	1/1:13,5:18:18.99:359,19,0	0/1:4,4:8:17.54:267,0,18
chr10	40947951	.	ATG	A	326.04	PASS	AB=0.930;AC=16;AF=0.296;AN=54;BaseQRankSum=5.917;DP=667;FS=1.149;HRun=0;HaplotypeScore=262.5766;InbreedingCoeff=0.1143;MQ=45.39;MQ0=10;MQRankSum=-4.281;QD=1.58;ReadPosRankSum=-5.347;VQSLOD=1.2280;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:9,0:9:10.96:57,11,0	0/0:21,0:21:38.13:0,38,318	0/1:19,1:13:9.73:10,0,369	0/1:28,4:13:44.92:45,0,339	0/1:1,0:1:0:0,0,0	0/1:6,0:6:22.21:55,0,22	1/1:4,0:4:5.25:36,5,0	0/1:17,3:15:17.82:18,0,242	0/0:50,0:50:99:0,151,2870	0/1:43,4:44:8.29:8,0,1057	0/0:18,4:22:6.27:0,6,211	0/0:45,0:45:86.69:0,87,2397	0/0:38,0:38:99:0,107,2029	0/1:16,0:16:11.82:52,0,12	0/0:15,1:16:16.49:0,16,124	0/1:6,1:7:42.90:43,0,59	1/1:4,1:5:5.32:21,5,0	0/0:19,1:20:43.49:0,43,505	0/0:14,1:11:26.14:0,26,259	0/0:30,2:32:44.22:0,44,530	0/0:97,6:103:40.28:0,40,831	./.	0/0:22,0:22:62.94:0,63,1166	0/0:40,0:40:99:0,102,1992	0/0:25,2:27:50.55:0,51,530	0/1:21,3:25:89.95:90,0,614	0/1:13,1:14:49.09:49,0,248	0/0:7,2:9:15.14:0,15,207
chr10	40947955	.	A	ACAC	796.79	PASS	AB=0.814;AC=11;AF=0.196;AN=56;BaseQRankSum=5.873;DP=699;FS=8.375;HRun=0;HaplotypeScore=278.8776;InbreedingCoeff=0.5989;MQ=45.08;MQ0=12;MQRankSum=-5.523;QD=11.07;ReadPosRankSum=-1.524;VQSLOD=1.3653;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:10,4:14:0.82:42,1,0	0/0:22,0:22:43.47:0,43,606	0/0:19,0:12:24.05:0,24,346	0/0:31,0:14:28.28:0,28,332	0/0:2,0:2:0:0,0,0	0/1:5,4:9:10.80:65,0,11	1/1:6,2:8:4.34:70,4,0	0/0:23,0:18:33.99:0,34,488	0/0:50,0:50:99:0,141,2263	0/0:44,0:41:94.31:0,94,1711	0/0:21,0:21:39.11:0,39,515	0/0:46,0:46:99:0,132,2130	0/0:37,0:37:99:0,102,1629	1/1:14,7:21:28.99:422,29,0	0/0:16,0:16:20.88:0,21,289	0/1:8,4:12:34.81:207,0,35	1/1:5,2:7:5.60:134,6,0	0/0:19,0:19:48.15:0,48,737	0/0:16,0:11:27.08:0,27,414	0/0:34,0:34:72.12:0,72,1019	0/0:105,0:105:99:0,103,1380	0/1:1,0:1:0:0,0,0	0/0:23,0:23:60.20:0,60,963	0/0:43,0:43:99:0,99,1595	0/0:29,0:29:57.19:0,57,841	0/0:25,0:25:62.98:0,63,925	0/0:13,0:13:30.09:0,30,443	0/0:9,0:9:15.05:0,15,241
chr10	40947965	.	ATG	A	626.78	PASS	AB=0.957;AC=16;AF=0.286;AN=56;BaseQRankSum=7.833;DP=657;FS=0.447;HRun=0;HaplotypeScore=244.0590;InbreedingCoeff=-0.1405;MQ=46.27;MQ0=9;MQRankSum=-9.792;QD=1.83;ReadPosRankSum=-9.535;VQSLOD=0.0516;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:15:5.35:41,5,0	0/1:16,1:17:35.61:36,0,36	0/0:20,0:13:38.98:0,39,640	0/0:25,0:12:31.51:0,32,567	0/0:5,0:5:3.99:0,4,12	0/1:13,0:13:7.05:7,0,8	1/1:9,0:9:0.04:22,0,0	0/0:25,0:21:4.22:0,4,127	0/0:47,0:47:99:0,141,2732	0/1:41,1:41:21.51:22,0,548	0/1:15,0:15:16.60:23,0,17	0/0:44,0:44:99:0,129,2526	0/0:32,1:33:86.16:0,86,1826	0/1:22,0:22:29.30:29,0,74	0/1:14,0:14:42.94:163,0,43	0/0:11,0:11:7.80:0,8,87	0/1:5,2:7:27.69:70,0,28	0/0:18,0:18:24.65:0,25,196	0/0:12,1:10:22.36:0,22,221	0/1:32,1:33:46.68:47,0,187	0/1:87,0:89:99:182,0,307	0/0:3,0:3:0.61:0,1,1	0/0:22,0:22:59.97:0,60,1167	0/0:42,0:42:99:0,105,2045	0/1:27,0:27:86.35:86,0,214	0/1:26,0:26:32.35:32,0,236	0/1:10,0:12:19:19,0,124	0/0:7,0:7:14.18:0,14,103
chr10	40947967	.	G	GCA	9933.62	PASS	AB=0.600;AC=39;AF=0.696;AN=56;BaseQRankSum=15.054;DP=690;FS=23.401;HRun=0;HaplotypeScore=224.6202;InbreedingCoeff=0.9093;MQ=46.31;MQ0=8;MQRankSum=-10.742;QD=22.03;ReadPosRankSum=-5.285;VQSLOD=2.9963;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:10,0:18:15:131,15,0	1/1:6,10:16:22.32:353,22,0	0/0:20,0:13:31.90:0,32,380	0/0:25,0:12:26.59:0,27,347	0/1:2,0:6:0:0,0,0	1/1:2,0:13:8.54:51,9,0	1/1:2,0:12:11.25:98,11,0	1/1:9,16:22:54.09:890,54,0	0/0:47,0:47:99:0,126,1631	1/1:16,29:44:51.49:1496,51,0	1/1:6,11:17:21.07:356,21,0	0/0:44,0:44:99:0,114,1463	0/0:33,0:33:65.37:0,65,997	1/1:9,2:23:26.10:188,26,0	1/1:2,13:15:30.10:507,30,0	1/1:5,0:14:20.75:171,21,0	1/1:6,0:8:14.97:123,15,0	1/1:7,15:22:45.10:725,45,0	1/1:10,3:10:15.05:248,15,0	1/1:18,15:33:38.99:662,39,0	1/1:34,60:95:99:1559,100,0	0/0:1,0:5:0.30:0,0,1	0/0:22,0:22:57.19:0,57,740	0/0:43,0:43:96.28:0,96,1214	1/1:12,16:28:40.54:627,41,0	1/1:7,20:27:70.09:1133,70,0	1/1:3,9:13:25.90:412,26,0	1/1:4,3:7:12.04:202,12,0
chr10	40948931	.	GT	G	4413.86	PASS	AB=0.944;AC=25;AF=0.446;AN=56;BaseQRankSum=9.950;DP=527;FS=1.156;HRun=10;HaplotypeScore=59.4150;InbreedingCoeff=0.8894;MQ=77.09;MQ0=0;MQRankSum=-1.742;QD=16.85;ReadPosRankSum=-0.435;VQSLOD=5.0663;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:96.26:0,96,1059	0/0:2,0:9:17.52:0,18,86	0/1:32,2:22:11.40:11,0,202	0/0:17,0:11:10.37:0,10,119	0/0:16,0:16:40.35:0,40,428	0/0:19,0:19:42.08:0,42,441	0/0:14,0:14:42.11:0,42,464	1/1:6,20:26:42.62:477,43,0	0/0:21,0:21:57.14:0,57,622	1/1:2,17:19:47.99:417,48,0	1/1:1,12:13:29.99:260,30,0	0/0:10,0:10:4.04:0,4,265	0/0:13,0:13:39.11:0,39,431	0/0:17,0:18:47.96:0,48,512	1/1:4,14:18:35.99:313,36,0	0/0:16,0:16:45.12:0,45,496	0/0:19,1:21:36.62:0,37,596	1/1:3,18:21:47.99:417,48,0	1/1:8,11:19:38.96:335,39,0	1/1:1,12:13:32.98:286,33,0	1/1:2,9:11:11.05:147,11,0	0/0:17,0:17:39.11:0,39,430	0/0:18,0:17:25.11:0,25,498	0/0:18,0:18:45.08:0,45,484	1/1:5,28:34:77.01:657,77,0	1/1:2,11:13:8.61:235,9,0	1/1:2,30:32:80.98:703,81,0	1/1:2,7:9:18:156,18,0
chr10	40949198	.	C	CA	7581.89	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=-2.500;DP=491;FS=4.393;HRun=1;HaplotypeScore=101.6555;InbreedingCoeff=0.7686;MQ=77.74;MQ0=1;MQRankSum=-1.860;QD=26.89;ReadPosRankSum=-1.097;VQSLOD=4.3698;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:44,0:44:88.02:88,0,100	1/1:0,5:5:11.63:175,12,0	0/0:28,0:23:24.09:0,24,616	0/0:27,1:25:57.44:0,57,617	0/0:17,0:17:8.75:0,9,88	0/0:19,0:19:41.81:0,42,147	0/1:18,0:18:50.14:55,0,50	1/1:1,18:19:54.02:636,54,0	0/0:12,0:12:33.05:0,33,384	1/1:1,15:16:48.06:598,48,0	1/1:0,5:5:15.05:219,15,0	0/0:10,0:10:27.09:0,27,376	0/0:11,0:11:33.11:0,33,453	0/1:20,0:20:25.99:26,0,39	1/1:0,15:15:23.73:348,24,0	0/0:21,0:21:23.93:0,24,173	0/0:22,0:22:54.31:0,54,246	1/1:0,20:21:60.17:858,60,0	1/1:0,23:23:69.18:905,69,0	1/1:1,18:19:45.09:630,45,0	1/1:0,16:16:39.13:570,39,0	0/0:15,0:15:29.46:0,29,88	0/0:10,0:10:30.09:0,30,379	0/0:16,0:16:45.15:0,45,627	1/1:2,12:14:37.44:540,37,0	1/1:0,20:20:57.17:813,57,0	1/1:1,19:19:57.19:816,57,0	1/1:0,7:7:21.07:307,21,0
chr10	40949236	.	GTA	G	1621.40	PASS	AB=1.000;AC=26;AF=0.464;AN=56;BaseQRankSum=7.075;DP=486;FS=3.315;HRun=0;HaplotypeScore=96.1098;InbreedingCoeff=0.8050;MQ=50.99;MQ0=55;MQRankSum=-0.743;QD=8.62;ReadPosRankSum=-2.877;VQSLOD=2.9838;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:44:30.04:0,30,459	1/1:4,0:3:8.95:69,9,0	0/0:20,0:8:17.72:0,18,209	0/0:20,0:15:15.24:0,15,345	0/0:20,0:17:36.10:0,36,588	0/0:19,0:18:42.14:0,42,693	0/0:21,0:16:39.13:0,39,680	1/1:11,0:4:11.90:90,12,0	0/0:14,0:12:29.67:0,30,419	0/1:18,0:12:29.36:141,0,29	1/1:7,0:5:9:81,9,0	0/0:16,0:16:24.34:0,24,454	0/0:15,0:13:15.10:0,15,457	0/1:18,0:16:3.46:3,0,180	1/1:9,1:8:5.99:48,6,0	0/0:20,0:18:45.15:0,45,735	0/0:28,0:25:54.14:0,54,836	1/1:14,3:17:33.52:249,34,0	1/1:10,0:8:8.97:93,9,0	1/1:15,2:16:29.14:227,29,0	1/1:26,1:15:20.88:153,21,0	0/0:19,0:19:18.47:0,18,515	0/0:15,0:12:14.33:0,14,284	0/0:25,0:24:36.02:0,36,959	1/1:15,1:14:19.64:156,20,0	1/1:13,2:14:41.99:379,42,0	1/1:10,2:10:11.18:105,11,0	1/1:6,0:5:6.38:41,6,0
chr10	40949264	.	GTA	G	2220.17	PASS	AB=1.000;AC=38;AF=0.792;AN=48;BaseQRankSum=2.254;DP=443;FS=3.652;HRun=0;HaplotypeScore=76.4981;InbreedingCoeff=0.1805;MQ=48.72;MQ0=56;MQRankSum=0.845;QD=5.48;ReadPosRankSum=-3.835;VQSLOD=1.7361;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:12,46:54:3.93:24,4,0	./.	./.	./.	1/1:23,0:21:39.32:305,39,0	1/1:25,0:24:10.46:162,10,0	0/1:29,0:24:5.22:110,0,5	1/1:9,0:1:2.50:9,2,0	0/0:16,0:14:14.06:0,14,198	0/1:12,0:6:43.94:56,0,44	1/1:6,0:4:2.99:24,3,0	0/0:16,0:16:23.33:0,23,272	0/1:14,0:12:14.27:14,0,88	1/1:6,13:17:4.21:37,4,0	./.	1/1:24,0:22:40.14:404,40,0	1/1:33,0:28:17.68:232,18,0	1/1:16,0:16:24.12:159,24,0	1/1:6,0:6:10.75:71,11,0	1/1:11,0:10:14.90:117,15,0	0/1:28,0:16:19.65:118,0,20	1/1:17,0:16:9.98:123,10,0	0/1:15,0:12:8.41:8,0,176	0/1:22,0:21:10.27:10,0,347	1/1:14,0:12:14.98:124,15,0	1/1:9,0:7:17.82:131,18,0	1/1:8,0:7:10.42:64,10,0	1/1:7,0:5:8.91:63,9,0
chr10	40949278	.	G	GTGTA	921.63	PASS	AB=0.930;AC=8;AF=0.143;AN=56;BaseQRankSum=0.433;DP=470;FS=0.693;HRun=0;HaplotypeScore=82.0588;InbreedingCoeff=0.0346;MQ=48.48;MQ0=52;MQRankSum=3.328;QD=4.23;ReadPosRankSum=3.002;VQSLOD=1.4707;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:62,2:60:7.82:172,8,0	0/0:8,0:8:11.98:0,12,98	0/0:6,0:2:5.92:0,6,39	0/0:11,0:6:14.99:0,15,129	0/1:25,0:23:99:233,0,107	0/1:25,0:24:8.88:9,0,63	0/1:32,0:27:12.37:73,0,12	0/0:15,0:10:26.80:0,27,175	0/0:17,0:15:35.87:0,36,372	0/0:12,0:7:17.87:0,18,135	0/0:6,0:4:2.99:0,3,24	0/0:16,0:16:32.77:0,33,413	0/0:15,0:13:29.77:0,30,310	0/1:18,1:17:16.82:36,0,17	0/0:6,0:3:2.99:0,3,24	0/1:21,1:20:99:432,0,202	0/1:16,13:27:99:100,0,124	0/0:11,0:11:26.64:0,27,163	0/0:9,0:8:17.92:0,18,144	0/0:7,0:6:7.26:0,7,49	0/0:27,0:16:24.16:0,24,186	0/0:11,8:19:14.47:0,14,123	0/0:14,0:11:23.99:0,24,299	0/0:21,0:20:41.96:0,42,491	0/0:9,0:7:4.26:0,4,47	0/0:10,0:9:23.66:0,24,171	0/0:7,0:6:11.82:0,12,80	0/0:5,0:4:8.94:0,9,66
chr10	40949280	.	G	GTA	508.56	PASS	AB=0.887;AC=7;AF=0.125;AN=56;BaseQRankSum=3.942;DP=477;FS=1.704;HRun=0;HaplotypeScore=77.5204;InbreedingCoeff=-0.1489;MQ=48.44;MQ0=52;MQRankSum=1.956;QD=2.34;ReadPosRankSum=5.489;VQSLOD=0.5926;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:65,0:61:97.14:97,0,157	0/0:8,0:8:11.98:0,12,98	0/0:7,0:2:5.94:0,6,41	0/0:12,0:7:17.98:0,18,154	0/1:25,0:23:51.26:51,0,171	0/1:10,15:24:45.15:45,0,61	0/1:9,22:26:10.64:214,0,11	0/0:15,0:10:27.44:0,27,190	0/0:18,0:16:35.76:0,36,339	0/0:12,0:7:17.90:0,18,140	0/0:6,0:4:2.86:0,3,17	0/0:16,0:16:15.54:0,16,344	0/0:17,0:15:29.76:0,30,288	0/1:17,0:15:45.53:46,0,46	0/0:6,0:3:5.99:0,6,49	0/1:22,0:20:99:144,0,197	0/1:32,0:28:39.96:40,0,140	0/0:12,0:12:26.97:0,27,154	0/0:9,0:8:17.93:0,18,147	0/0:7,0:6:12.96:0,13,76	0/0:28,0:17:26.77:0,27,200	0/0:20,0:19:17.89:0,18,140	0/0:14,0:11:23.98:0,24,263	0/0:22,0:21:41.94:0,42,433	0/0:9,0:7:8.99:0,9,75	0/0:10,0:9:23.73:0,24,174	0/0:7,0:6:11.32:0,11,76	0/0:5,0:4:9.36:0,9,64
chr10	40949995	.	CT	C	3467.85	PASS	AB=0.694;AC=37;AF=0.661;AN=56;BaseQRankSum=4.130;DP=467;FS=0.944;HRun=11;HaplotypeScore=107.8556;InbreedingCoeff=0.3796;MQ=60.76;MQ0=1;MQRankSum=-0.742;QD=8.48;ReadPosRankSum=5.986;VQSLOD=2.3823;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,35:42:92.88:763,93,0	1/1:2,3:5:8.99:74,9,0	0/1:7,0:4:1.55:2,0,11	0/0:13,1:7:11.73:0,12,95	1/1:6,23:29:62.02:557,62,0	1/1:2,23:25:56.93:468,57,0	1/1:3,13:16:29.94:244,30,0	0/1:11,0:18:8.52:9,0,26	0/0:7,0:7:21.05:0,21,223	0/1:9,0:23:5.85:29,0,6	0/1:12,0:23:2.99:38,0,3	0/0:9,0:9:23.27:0,23,230	0/1:6,2:8:28.25:28,0,127	1/1:1,10:11:23.97:197,24,0	1/1:7,0:13:12.01:36,12,0	1/1:0,18:18:44.95:370,45,0	1/1:3,16:19:9.96:288,10,0	1/1:7,0:15:16.31:48,16,0	1/1:13,0:34:2:48,2,0	1/1:7,0:20:9.87:37,10,0	0/1:4,0:8:4.34:4,0,5	1/1:1,6:7:20.02:154,20,0	0/0:11,0:11:24.05:0,24,248	0/0:17,0:17:48.11:0,48,504	0/1:3,0:14:8.56:9,0,24	0/1:11,0:28:7.35:31,0,7	0/1:5,0:14:3.49:15,0,3	1/1:2,0:7:8.03:21,8,0
chr10	40950002	.	T	TTA	2439.86	PASS	AB=0.921;AC=19;AF=0.339;AN=56;BaseQRankSum=8.375;DP=486;FS=8.878;HRun=0;HaplotypeScore=123.4646;InbreedingCoeff=0.5597;MQ=60.06;MQ0=2;MQRankSum=-10.490;QD=10.52;ReadPosRankSum=2.459;VQSLOD=3.1620;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:92.65:0,93,725	0/0:3,0:3:8.97:0,9,70	0/0:10,0:4:5.46:0,5,39	0/0:17,0:8:20.10:0,20,171	0/0:28,0:28:83.24:0,83,648	0/0:25,0:25:59.77:0,60,468	0/0:15,0:15:35.85:0,36,277	0/1:19,4:24:99:246,0,113	0/0:9,0:9:27.07:0,27,354	1/1:20,4:22:47.31:370,47,0	0/1:21,3:23:30.34:252,0,30	0/0:10,0:10:30.08:0,30,389	0/0:9,0:9:24.03:0,24,276	0/0:10,0:10:23.91:0,24,188	1/1:8,4:11:12.34:58,12,0	0/0:20,0:20:50.81:0,51,400	0/0:22,0:21:53.85:0,54,450	1/1:13,1:14:8.54:156,9,0	0/1:36,0:34:20.84:298,0,21	1/1:19,2:21:25.39:371,25,0	0/1:7,1:8:6.29:50,0,6	0/0:8,0:8:22.17:0,22,168	0/0:11,0:11:33.08:0,33,411	0/0:20,0:20:56.68:0,57,754	1/1:14,0:14:8.30:257,8,0	1/1:30,2:28:15.30:408,15,0	0/1:16,0:13:16.34:129,0,16	1/1:7,0:7:10.99:42,11,0
chr10	40950009	.	TTA	T	7270.79	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=15.430;DP=464;FS=1.199;HRun=0;HaplotypeScore=102.4703;InbreedingCoeff=0.9572;MQ=54.69;MQ0=3;MQRankSum=-15.425;QD=34.30;ReadPosRankSum=-1.139;VQSLOD=6.6637;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,105,1746	0/0:3,0:3:9.03:0,9,148	0/0:12,0:2:1.98:0,2,7	0/0:17,0:6:11.76:0,12,139	0/0:29,0:29:75.92:0,76,1313	0/0:23,0:23:57.11:0,57,923	0/0:14,0:14:37.66:0,38,609	1/1:7,17:24:65.83:865,66,0	0/0:8,0:8:24.06:0,24,380	1/1:5,17:20:55.93:719,56,0	1/1:6,16:21:59.95:785,60,0	0/0:11,0:11:30.10:0,30,523	0/0:9,0:9:23.97:0,24,417	0/0:10,0:10:24.08:0,24,427	1/1:2,9:10:21.07:317,21,0	0/0:18,0:18:28.12:0,28,812	0/0:22,0:21:57.17:0,57,947	1/1:2,10:12:33.11:500,33,0	1/1:5,26:30:73.82:1031,74,0	1/1:3,16:19:51.08:670,51,0	1/1:2,6:8:18.04:239,18,0	0/0:9,0:9:24.07:0,24,365	0/0:9,0:9:27.08:0,27,437	0/0:20,0:20:53.89:0,54,919	1/1:2,11:13:36.99:484,37,0	1/1:5,24:25:75.09:954,75,0	1/1:2,13:13:36.10:487,36,0	1/1:0,5:5:15.05:219,15,0
chr10	40950029	.	CT	C	3103.74	PASS	AC=22;AF=0.407;AN=54;BaseQRankSum=9.708;DP=460;FS=3.313;HRun=9;HaplotypeScore=99.6445;InbreedingCoeff=0.9148;MQ=50.01;MQ0=7;MQRankSum=-13.751;QD=15.52;ReadPosRankSum=-0.003;VQSLOD=3.7300;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,1:36:75.18:0,75,846	0/0:4,0:4:6.02:0,6,70	0/0:11,0:1:2.04:0,2,6	./.	0/0:25,0:25:66.18:0,66,751	0/0:19,0:19:42.12:0,42,476	0/0:13,1:14:8.53:0,9,309	1/1:8,20:27:57.01:521,57,0	0/0:9,0:9:24.05:0,24,264	1/1:5,16:19:39.01:357,39,0	1/1:4,17:20:42.01:383,42,0	0/0:15,0:15:39.12:0,39,450	0/0:14,0:14:36.10:0,36,407	0/0:13,0:13:33.10:0,33,381	1/1:2,8:9:15.01:137,15,0	0/0:17,0:17:39.98:0,40,434	0/0:21,0:21:44.18:0,44,526	1/1:3,11:14:24.01:220,24,0	1/1:12,17:28:47.99:439,48,0	1/1:4,13:17:30.01:274,30,0	0/0:3,4:7:0:0,0,0	0/0:7,0:7:15.04:0,15,173	0/0:9,0:9:21.02:0,21,227	0/0:21,0:21:54.16:0,54,624	1/1:4,9:13:21.01:191,21,0	1/1:3,21:20:51.01:464,51,0	1/1:5,13:15:23.99:219,24,0	1/1:1,4:5:12:110,12,0
chr10	40950918	.	A	ATTAACTCACCCATC	1847.84	PASS	AB=0.700;AC=23;AF=0.958;AN=24;BaseQRankSum=-0.751;DP=26;FS=11.549;HRun=0;HaplotypeScore=26.8224;InbreedingCoeff=-0.1956;MQ=164.02;MQ0=0;MQRankSum=-1.152;QD=71.07;ReadPosRankSum=0.250;VQSLOD=1.3585;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	./.	1/1:0,1:3:9.03:571,9,0	0/1:4,0:7:47.94:537,0,48	./.	1/1:2,0:2:6.02:123,6,0	./.	1/1:5,0:5:15.03:239,15,0	1/1:1,0:1:2.99:24,3,0	1/1:1,0:1:3:29,3,0	./.	./.	./.	./.	./.	./.	1/1:1,0:1:3.01:66,3,0	./.	1/1:1,0:1:3.01:73,3,0	1/1:1,0:1:3.01:72,3,0	1/1:1,0:1:3.01:71,3,0	./.	./.	1/1:2,0:2:2.97:20,3,0	./.	./.	1/1:1,0:1:3.01:102,3,0	./.
chr10	40951383	.	AT	A	4168.66	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=10.988;DP=376;FS=4.481;HRun=10;HaplotypeScore=39.6472;InbreedingCoeff=0.8866;MQ=68.24;MQ0=0;MQRankSum=1.399;QD=19.39;ReadPosRankSum=-0.590;VQSLOD=3.9752;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:69.18:0,69,755	1/1:0,5:5:12:104,12,0	0/0:6,0:5:3:0,3,29	0/0:6,0:5:5.58:0,6,43	0/0:19,0:19:48.11:0,48,515	0/0:13,0:13:36.10:0,36,398	0/0:8,0:8:18.05:0,18,199	1/1:9,28:37:77.94:671,78,0	0/0:9,0:9:27.07:0,27,299	1/1:5,17:23:50.02:422,50,0	1/1:1,9:10:26.99:234,27,0	0/0:6,0:6:15.04:0,15,166	0/0:10,0:10:21.06:0,21,232	0/0:10,0:10:24.02:0,24,252	1/1:1,9:10:20.99:182,21,0	0/0:8,0:8:24.06:0,24,266	0/0:27,0:27:81.18:0,81,875	1/1:7,16:23:3.90:299,4,0	1/1:4,13:17:38.95:332,39,0	1/1:1,12:13:32.99:286,33,0	1/1:4,2:6:5.99:52,6,0	0/0:2,0:2:3.01:0,3,33	0/0:5,0:5:12.03:0,12,133	0/0:7,0:7:18.05:0,18,199	1/1:1,12:13:29.98:260,30,0	1/1:0,17:19:49:394,49,0	1/1:0,17:17:47.99:417,48,0	1/1:1,21:22:32.83:514,33,0
chr10	40953121	.	CCTT	C	4146.07	PASS	AB=0.727;AC=17;AF=0.304;AN=56;BaseQRankSum=8.664;DP=692;FS=1.959;HRun=0;HaplotypeScore=168.2981;InbreedingCoeff=0.9121;MQ=65.11;MQ0=17;MQRankSum=-7.929;QD=24.53;ReadPosRankSum=2.273;VQSLOD=3.9979;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,22:25:34.38:563,34,0	0/1:5,3:8:35.47:133,0,35	0/0:73,0:30:69.15:0,69,1183	0/0:94,0:38:29.20:0,29,805	1/1:2,17:18:24.08:407,24,0	1/1:4,13:18:29.23:444,29,0	1/1:4,19:23:26.75:457,27,0	0/0:26,0:26:66.21:0,66,1299	0/0:12,0:12:24.08:0,24,553	0/0:31,0:31:90.30:0,90,1833	0/0:20,0:20:53.92:0,54,940	0/0:28,0:28:78.18:0,78,1520	0/0:12,0:12:23.97:0,24,521	1/1:5,11:16:24.08:418,24,0	0/0:27,0:27:75.04:0,75,1482	1/1:1,22:22:56.99:918,57,0	1/1:4,17:19:28.75:540,29,0	0/0:14,0:14:33.11:0,33,708	0/0:14,0:15:35.14:0,35,828	0/0:24,0:24:57.02:0,57,1072	0/0:26,0:26:54.04:0,54,1132	1/1:4,9:14:18.35:267,18,0	0/0:26,0:25:72.25:0,72,1595	0/0:31,0:29:81.08:0,81,1630	0/0:14,0:14:33.07:0,33,624	0/0:18,0:18:51.60:0,52,1055	0/0:15,0:16:27.09:0,27,578	0/0:13,0:13:28.22:0,28,566
chr10	40953122	.	CT	C	1096.14	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=11.699;DP=684;FS=0.424;HRun=2;HaplotypeScore=160.7302;InbreedingCoeff=0.9110;MQ=63.76;MQ0=17;MQRankSum=-7.038;QD=6.60;ReadPosRankSum=2.273;VQSLOD=0.8322;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:25,1:25:29.04:163,29,0	0/1:8,0:8:12.92:37,0,13	0/0:71,1:29:41.61:0,42,793	0/0:94,1:36:30.94:0,31,638	1/1:18,0:17:22.22:116,22,0	1/1:17,0:17:13.05:85,13,0	1/1:22,2:23:23.63:166,24,0	0/0:26,0:26:66.20:0,66,921	0/0:13,0:13:24.08:0,24,359	0/0:31,0:31:90.28:0,90,1274	0/0:20,0:20:45.02:0,45,599	0/0:27,0:27:75.16:0,75,1008	0/0:12,0:12:23.94:0,24,357	1/1:15,0:15:20.62:125,21,0	0/0:27,0:27:66.10:0,66,935	1/1:23,0:22:53.76:327,54,0	1/1:20,1:19:27.72:154,28,0	0/0:14,0:14:33.11:0,33,485	0/0:15,0:15:27.93:0,28,576	0/0:24,0:24:45.14:0,45,668	0/0:25,0:25:54.04:0,54,775	1/1:13,1:14:17.55:130,18,0	0/0:25,0:24:72.24:0,72,1069	0/0:31,0:29:81.07:0,81,1089	0/0:14,0:14:30.09:0,30,435	0/0:18,0:18:51.61:0,52,719	0/0:16,0:16:27.09:0,27,382	0/0:12,0:13:28.18:0,28,379
chr10	40953916	.	AAAC	A	5388.78	PASS	AB=0.994;AC=21;AF=0.375;AN=56;BaseQRankSum=-8.440;DP=709;FS=3.881;HRun=0;HaplotypeScore=140.1991;InbreedingCoeff=0.0388;MQ=62.62;MQ0=2;MQRankSum=0.209;QD=11.90;ReadPosRankSum=-9.415;VQSLOD=2.0489;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:2,35:37:84.29:1335,84,0	1/1:2,10:12:15.05:241,15,0	0/0:32,0:25:48.50:0,48,981	0/0:29,0:26:63.20:0,63,1155	1/1:30,0:30:19.44:308,19,0	0/0:17,0:17:17.77:0,18,144	0/0:16,0:16:20.73:0,21,167	0/1:37,0:37:99:684,0,143	0/0:16,0:16:45.15:0,45,929	0/1:32,0:32:99:193,0,506	0/1:16,0:16:99:177,0,215	0/0:23,0:23:69.23:0,69,1430	0/0:21,0:21:63.21:0,63,1240	0/0:24,0:24:18.03:0,18,171	0/1:18,0:18:4.01:4,0,272	0/0:33,0:33:23.62:0,24,374	0/1:21,0:21:3.20:3,0,109	0/1:22,2:24:99:254,0,318	0/1:27,0:26:99:594,0,124	0/1:40,0:40:99:153,0,614	0/1:21,0:21:17.18:17,0,416	1/1:1,24:25:60.20:880,60,0	0/0:24,0:24:66.22:0,66,1275	0/0:21,0:21:63.13:0,63,1244	0/1:29,0:29:86.16:86,0,491	0/1:31,0:31:99:161,0,441	0/1:36,0:36:99:153,0,601	0/1:17,0:17:99:145,0,271
chr10	40953919	.	C	CAAACA	9580.93	PASS	AB=0.608;AC=30;AF=0.536;AN=56;BaseQRankSum=-9.728;DP=730;FS=0.640;HRun=0;HaplotypeScore=154.4899;InbreedingCoeff=0.2646;MQ=64.69;MQ0=2;MQRankSum=-2.936;QD=17.55;ReadPosRankSum=-11.527;VQSLOD=1.3855;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:36,0:37:96.25:96,0,518	0/0:12,0:12:11.90:0,12,109	0/0:33,0:26:54.51:0,55,1007	0/0:30,0:27:69.13:0,69,1078	1/1:2,1:33:63.21:1209,63,0	1/1:1,14:17:18.06:569,18,0	1/1:0,15:16:16.86:567,17,0	1/1:4,0:35:69.35:972,69,0	0/0:16,0:16:48.16:0,48,896	0/1:0,0:32:0.05:503,0,0	1/1:0,0:18:17.90:331,18,0	0/0:26,0:26:78.25:0,78,1478	0/0:24,0:24:63.21:0,63,1142	1/1:1,0:24:18.06:456,18,0	0/1:0,0:16:21.33:62,0,21	0/1:1,1:35:19.96:1038,0,20	1/1:1,1:23:18.06:420,18,0	0/1:5,0:26:48.85:313,0,49	1/1:1,0:28:42.77:753,43,0	1/1:2,0:43:2.30:520,2,0	0/1:1,0:24:19.37:194,0,19	0/1:24,0:24:99:290,0,235	0/0:22,0:22:66.22:0,66,1227	0/0:21,0:21:63.13:0,63,1147	0/1:2,0:29:27.91:221,0,28	0/1:1,0:31:8.53:435,0,9	0/1:2,0:37:18.06:343,0,18	1/1:0,0:17:1.73:289,2,0
chr10	40954341	.	T	TA	161.59	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-2.759;DP=645;FS=0.000;HRun=7;HaplotypeScore=61.7607;InbreedingCoeff=0.9736;MQ=69.80;MQ0=0;MQRankSum=-2.448;QD=14.69;ReadPosRankSum=0.949;VQSLOD=3.1740;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:60.10:0,60,579	1/1:2,9:11:21.06:254,21,0	0/0:16,0:16:36.03:0,36,337	0/0:17,0:16:13.52:0,14,348	0/0:28,0:28:81.13:0,81,782	0/0:21,0:21:60.10:0,60,579	0/0:23,0:23:60.10:0,60,579	0/0:28,0:28:75.11:0,75,723	0/0:29,0:29:75.09:0,75,713	0/0:37,0:37:96.15:0,96,927	0/0:25,0:25:60.08:0,60,579	0/0:20,0:20:57.07:0,57,539	0/0:17,0:17:48.07:0,48,463	0/0:18,0:18:54.02:0,54,505	0/0:28,0:28:75.11:0,75,723	0/0:19,0:19:57.08:0,57,545	0/0:12,0:12:36.06:0,36,347	0/0:19,0:19:57.09:0,57,550	0/0:27,0:27:69.06:0,69,648	0/0:40,0:40:99:0,108,1037	0/0:27,0:27:60.08:0,60,579	0/0:24,0:24:57.07:0,57,545	0/0:26,0:26:69.10:0,69,666	0/0:19,0:19:57.09:0,57,550	0/0:31,0:31:75.11:0,75,724	0/0:16,0:16:48.06:0,48,454	0/0:31,0:31:81.12:0,81,782	0/0:15,0:15:30.05:0,30,290
chr10	40955111	.	TAACCACCGAGAAA	T	398.15	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.443;DP=722;FS=12.200;HRun=0;HaplotypeScore=250.7007;InbreedingCoeff=0.9681;MQ=88.79;MQ0=1;MQRankSum=-3.402;QD=79.63;ReadPosRankSum=0.137;VQSLOD=2.1270;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,163,10825	1/1:1,4:5:11.97:484,12,0	0/0:26,0:26:78.24:0,78,4216	0/0:27,0:27:78.22:0,78,4648	0/0:25,0:25:75.26:0,75,4851	0/0:18,0:18:54.19:0,54,3550	0/0:28,0:28:84.29:0,84,5552	0/0:24,0:24:69.24:0,69,4214	0/0:19,0:19:57.20:0,57,3756	0/0:23,0:23:69.23:0,69,4453	0/0:19,0:19:57.20:0,57,3735	0/0:27,0:27:81.28:0,81,5172	0/0:25,0:25:75.26:0,75,4837	0/0:23,0:22:63.22:0,63,4178	0/0:21,0:21:63.22:0,63,4078	0/0:23,0:23:69.24:0,69,4558	0/0:34,0:34:99:0,102,6862	0/0:31,0:31:93.32:0,93,5807	0/0:30,0:30:90.28:0,90,4978	0/0:18,0:18:54.18:0,54,3260	0/0:54,0:54:99:0,160,9358	0/0:22,0:22:66.22:0,66,3831	0/0:21,0:21:63.20:0,63,3829	0/0:32,0:32:96.29:0,96,6203	0/0:22,0:22:66.20:0,66,3798	0/0:25,0:25:72.25:0,72,4449	0/0:21,0:21:63.20:0,63,3863	0/0:25,0:25:75.26:0,75,4542
chr10	40955899	.	C	CT	6464.70	PASS	AB=1.000;AC=27;AF=0.482;AN=56;BaseQRankSum=1.402;DP=614;FS=10.520;HRun=9;HaplotypeScore=84.5475;InbreedingCoeff=0.9486;MQ=71.62;MQ0=2;MQRankSum=-3.677;QD=21.62;ReadPosRankSum=-3.127;VQSLOD=3.6126;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:51,1:52:86.33:0,86,982	1/1:1,6:7:18.05:199,18,0	0/0:23,0:17:14.74:0,15,236	0/1:28,0:24:2.89:3,0,227	0/0:28,0:28:32.78:0,33,510	0/0:15,0:15:41.99:0,42,364	0/0:32,0:31:58.96:0,59,609	1/1:24,13:35:62.13:574,62,0	0/0:18,0:18:41.98:0,42,364	1/1:10,12:22:60.10:634,60,0	1/1:8,12:21:44.95:471,45,0	0/0:16,0:16:35.98:0,36,312	0/0:13,0:13:29.98:0,30,260	0/0:19,0:19:35.97:0,36,312	1/1:9,5:14:30.08:332,30,0	0/0:13,0:13:29.95:0,30,255	0/0:21,0:21:47.97:0,48,416	1/1:9,8:17:42.05:431,42,0	1/1:1,21:23:66.13:707,66,0	1/1:13,11:24:34.11:596,34,0	1/1:15,8:23:47.85:483,48,0	0/0:23,0:23:44.98:0,45,391	0/0:13,0:13:26.99:0,27,234	0/0:29,0:29:62.98:0,63,547	1/1:7,9:16:42.11:464,42,0	1/1:13,12:25:60.15:655,60,0	1/1:16,10:26:56.77:617,57,0	1/1:12,4:16:27.07:298,27,0
chr10	40955915	.	CT	C	2415.92	PASS	AB=0.861;AC=24;AF=0.429;AN=56;BaseQRankSum=8.906;DP=551;FS=1.369;HRun=11;HaplotypeScore=85.7059;InbreedingCoeff=0.8460;MQ=62.89;MQ0=6;MQRankSum=-2.511;QD=9.78;ReadPosRankSum=0.583;VQSLOD=3.0610;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,1:46:81.83:0,82,1048	0/0:7,0:7:17.71:0,18,122	0/0:15,0:12:6.68:0,7,26	0/0:20,0:17:18.63:0,19,105	0/0:24,1:26:26.39:0,26,456	0/0:18,0:18:33.07:0,33,345	0/0:31,0:32:47.18:0,47,625	0/1:21,5:24:53.91:115,0,54	0/0:14,0:15:32.89:0,33,315	1/1:12,12:24:44.89:369,45,0	1/1:11,11:22:28.84:227,29,0	0/0:14,0:14:30.06:0,30,312	0/1:13,1:15:4.52:5,0,198	0/0:16,0:16:27.02:0,27,262	1/1:9,2:11:17.94:147,18,0	0/0:9,0:8:18.04:0,18,189	0/0:18,1:21:16.51:0,17,383	1/1:13,4:17:28.72:223,29,0	1/1:12,6:18:20.47:161,20,0	1/1:12,8:20:35.81:289,36,0	1/1:18,1:17:11.90:98,12,0	0/0:21,0:20:42.10:0,42,441	0/0:14,0:15:33.04:0,33,339	0/0:24,1:25:60.62:0,61,640	1/1:11,3:14:17.94:148,18,0	1/1:17,7:24:47.89:390,48,0	1/1:16,10:27:37.43:317,37,0	1/1:9,1:10:17.97:148,18,0
chr10	40958349	.	AAAC	A	1426.37	PASS	AB=0.983;AC=11;AF=0.204;AN=54;BaseQRankSum=0.373;DP=585;FS=20.126;HRun=0;HaplotypeScore=101.2146;InbreedingCoeff=0.6675;MQ=52.17;MQ0=10;MQRankSum=3.033;QD=8.80;ReadPosRankSum=1.492;VQSLOD=1.7800;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:46:30.51:0,31,387	1/1:1,0:1:3.01:30,3,0	./.	0/1:31,0:19:0:0,0,0	1/1:8,13:22:33.07:419,33,0	0/0:7,0:16:21.07:0,21,294	0/1:25,0:25:6.71:7,0,545	0/0:27,0:27:18.06:0,18,279	0/0:20,0:20:30.09:0,30,676	0/0:6,0:11:15.05:0,15,201	0/0:9,0:16:20.82:0,21,205	0/0:16,0:16:33.10:0,33,600	0/0:17,0:17:30.09:0,30,536	1/1:8,11:19:24.08:319,24,0	0/0:9,0:20:18.53:0,19,259	0/0:7,0:21:42.14:0,42,568	1/1:21,23:44:60.20:796,60,0	0/0:12,0:19:11.94:0,12,116	0/0:13,0:20:30.10:0,30,412	0/0:8,0:15:18.03:0,18,224	0/0:17,0:18:22.70:0,23,216	0/0:4,0:9:21.07:0,21,290	0/1:18,1:18:9.74:10,0,479	0/0:38,0:38:66.18:0,66,1228	0/0:6,0:14:20.98:0,21,244	0/0:17,0:27:44.91:0,45,573	0/0:13,0:16:9:0,9,88	0/0:1,0:5:6.02:0,6,78
chr10	40959047	.	T	TTCCCAGCCA	25884.76	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=13.545;DP=390;FS=2.269;HRun=0;HaplotypeScore=147.9992;InbreedingCoeff=0.9541;MQ=95.07;MQ0=0;MQRankSum=-14.378;QD=114.03;ReadPosRankSum=1.391;VQSLOD=5.4364;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,14:20:54.18:2017,54,0	0/0:9,0:9:27.05:0,27,612	0/0:21,0:21:51.03:0,51,1222	0/0:24,0:24:65.31:0,65,1638	1/1:2,11:14:39.12:1435,39,0	1/1:1,10:11:33.11:1408,33,0	1/1:2,19:21:57.20:2505,57,0	1/1:1,3:7:9.02:419,9,0	0/0:25,0:25:75.26:0,75,2376	1/1:0,8:12:27.09:1244,27,0	1/1:0,3:3:9.03:411,9,0	0/0:16,0:16:48.14:0,48,1400	0/0:21,0:21:63.22:0,63,1955	1/1:4,12:16:48.16:2072,48,0	1/1:4,12:16:48.13:1892,48,0	1/1:1,7:8:21.07:970,21,0	1/1:2,14:16:45.15:2018,45,0	1/1:1,5:6:15.05:697,15,0	1/1:0,6:6:18.06:842,18,0	1/1:2,1:3:9.03:255,9,0	1/1:2,3:5:9.03:412,9,0	1/1:2,9:12:33.11:1413,33,0	0/0:17,0:17:48.16:0,48,1496	0/0:30,0:29:87.30:0,87,2673	1/1:3,8:11:30.10:1254,30,0	1/1:0,16:19:48.16:2221,48,0	1/1:3,12:16:42.11:1766,42,0	1/1:1,4:5:15.05:633,15,0
chr10	40959050	.	G	GT	6536.16	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=15.863;DP=393;FS=9.625;HRun=0;HaplotypeScore=168.0525;InbreedingCoeff=0.9493;MQ=93.12;MQ0=0;MQRankSum=-14.095;QD=27.93;ReadPosRankSum=2.251;VQSLOD=3.6612;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,18:20:57.10:653,57,0	0/0:7,0:7:18.06:0,18,252	0/0:19,0:19:50.91:0,51,604	0/0:24,0:24:58.67:0,59,744	1/1:1,12:13:37.31:392,37,0	1/1:0,10:10:30.08:337,30,0	1/1:2,19:21:62.08:639,62,0	1/1:3,4:7:15.03:178,15,0	0/0:25,0:25:75.24:0,75,1031	1/1:3,9:12:30.06:310,30,0	1/1:0,3:3:6.02:66,6,0	0/0:15,0:15:45.14:0,45,614	0/0:21,0:21:63.19:0,63,853	1/1:4,12:16:35:396,35,0	1/1:3,12:15:25.56:412,26,0	1/1:0,9:9:24.03:246,24,0	1/1:3,14:17:47.72:482,48,0	1/1:2,5:7:21.02:210,21,0	1/1:1,6:7:21.05:228,21,0	1/1:0,2:2:6.02:76,6,0	1/1:1,9:10:12.03:134,12,0	1/1:2,10:12:32.71:348,33,0	0/0:17,0:17:48.16:0,48,662	0/0:31,0:30:93.28:0,93,1264	1/1:3,9:12:29.15:331,29,0	1/1:3,16:19:51.10:536,51,0	1/1:5,13:18:38.20:429,38,0	1/1:0,4:4:12.03:133,12,0
chr10	40960991	.	T	TTAA	11710.46	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=18.252;DP=580;FS=0.310;HRun=0;HaplotypeScore=172.0561;InbreedingCoeff=0.9993;MQ=60.07;MQ0=0;MQRankSum=-18.340;QD=49.00;ReadPosRankSum=-2.691;VQSLOD=5.3612;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:84.27:0,84,1451	1/1:0,10:12:36.12:634,36,0	0/0:25,0:22:63.22:0,63,1091	0/0:23,0:22:66.22:0,66,1104	0/0:26,0:26:78.25:0,78,1348	0/0:28,0:28:84.29:0,84,1481	0/0:20,0:20:55.74:0,56,949	1/1:11,16:27:69.23:1236,69,0	0/0:25,0:25:75.26:0,75,1323	1/1:2,20:22:66.22:1179,66,0	1/1:1,18:19:54.18:897,54,0	0/0:26,0:26:78.27:0,78,1369	0/0:16,0:16:48.16:0,48,846	0/0:26,0:26:78.27:0,78,1376	1/1:0,15:16:48.16:825,48,0	0/0:19,0:19:57.18:0,57,970	0/0:23,0:23:69.24:0,69,1211	1/1:1,15:16:45.15:842,45,0	1/1:7,11:18:51.15:920,51,0	1/1:2,22:24:69.19:1148,69,0	1/1:1,8:9:21.07:351,21,0	0/0:14,0:14:42.14:0,42,737	0/0:18,0:18:54.18:0,54,950	0/0:24,0:23:69.15:0,69,1189	1/1:1,19:20:57.20:995,57,0	1/1:4,14:19:45.14:834,45,0	1/1:0,27:27:81.28:1392,81,0	1/1:4,6:10:27.06:458,27,0
chr10	40960993	.	CT	C	4862.36	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=19.238;DP=558;FS=1.021;HRun=3;HaplotypeScore=164.1845;InbreedingCoeff=0.9982;MQ=61.80;MQ0=0;MQRankSum=-17.897;QD=22.83;ReadPosRankSum=-1.090;VQSLOD=3.8158;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:81.28:0,81,1294	1/1:1,11:12:34.70:284,35,0	0/0:25,0:22:63.20:0,63,985	0/0:24,0:23:69.22:0,69,1069	0/0:27,0:27:81.26:0,81,1269	0/0:28,0:28:84.27:0,84,1320	0/0:19,0:19:57.19:0,57,897	1/1:0,16:16:47.97:412,48,0	0/0:26,0:26:78.25:0,78,1223	1/1:0,20:20:55.69:476,56,0	1/1:0,18:18:50.51:348,51,0	0/0:26,0:26:78.27:0,78,1247	0/0:17,0:17:51.16:0,51,789	0/0:26,0:26:78.27:0,78,1247	1/1:0,16:16:47.73:373,48,0	0/0:18,0:18:54.18:0,54,863	0/0:23,0:23:69.22:0,69,1079	1/1:0,15:15:41.65:347,42,0	1/1:1,11:12:33:289,33,0	1/1:0,24:24:65.65:490,66,0	1/1:1,8:9:20.85:149,21,0	0/0:14,0:14:42.13:0,42,649	0/0:19,0:19:57.18:0,57,884	0/0:26,0:25:75.19:0,75,1122	1/1:1,19:20:59.72:468,60,0	1/1:0,18:18:50.98:472,51,0	1/1:0,27:27:79.92:609,80,0	1/1:0,6:6:17.96:145,18,0
chr10	40961580	.	T	TG	172	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-2.734;DP=660;FS=0.000;HRun=6;HaplotypeScore=118.9803;InbreedingCoeff=0.9922;MQ=68.33;MQ0=0;MQRankSum=-1.294;QD=19.11;ReadPosRankSum=-0.746;VQSLOD=2.1811;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,141,1439	1/1:0,9:9:21.07:264,21,0	0/0:20,0:19:39.01:0,39,372	0/0:14,0:13:23.84:0,24,211	0/0:32,0:32:87.19:0,87,888	0/0:25,0:25:66.15:0,66,673	0/0:24,0:24:60.11:0,60,604	0/0:22,0:22:57.12:0,57,576	0/0:25,0:25:63.14:0,63,643	0/0:26,0:26:69.14:0,69,698	0/0:17,0:17:51.12:0,51,520	0/0:19,0:19:51.11:0,51,520	0/0:12,0:12:27.06:0,27,275	0/0:16,0:16:48.07:0,48,474	0/0:16,0:16:45.06:0,45,449	0/0:21,0:21:57.13:0,57,581	0/0:34,0:34:96.20:0,96,973	0/0:20,0:20:54.12:0,54,551	0/0:30,0:30:80.21:0,80,801	0/0:26,0:26:66.14:0,66,673	0/0:46,0:46:99:0,126,1269	0/0:25,0:25:72.14:0,72,726	0/0:20,0:20:57.11:0,57,574	0/0:25,0:25:75.17:0,75,765	0/0:23,0:23:60.13:0,60,612	0/0:28,0:28:75.17:0,75,765	0/0:17,0:17:48.11:0,48,490	0/0:14,0:14:30.06:0,30,306
chr10	40961801	.	G	GA	6963.13	PASS	AB=0.538;AC=41;AF=0.732;AN=56;BaseQRankSum=9.589;DP=575;FS=2.993;HRun=9;HaplotypeScore=97.4962;InbreedingCoeff=0.8778;MQ=81.23;MQ0=1;MQRankSum=-3.105;QD=15.90;ReadPosRankSum=0.264;VQSLOD=4.9410;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,37:42:87.24:962,87,0	1/1:0,8:8:24.06:265,24,0	0/0:19,0:19:26.96:0,27,234	0/0:15,0:15:26.95:0,27,229	1/1:13,16:28:1.87:425,2,0	1/1:2,21:23:42.11:465,42,0	1/1:2,15:17:45.12:498,45,0	1/1:4,0:26:58.01:306,58,0	0/0:18,0:18:44.96:0,45,387	1/1:7,0:30:62.46:333,62,0	1/1:3,0:27:68.41:379,68,0	0/0:21,1:22:17.78:0,18,383	0/0:19,0:19:53.99:0,54,468	1/1:4,9:13:27.07:299,27,0	1/1:3,0:18:25.75:133,26,0	1/1:0,12:12:33.09:365,33,0	0/1:2,12:14:10:356,0,10	1/1:1,0:8:17.32:93,17,0	1/1:5,4:14:24.44:161,24,0	1/1:6,0:29:49.36:280,49,0	1/1:2,0:10:22.73:114,23,0	1/1:3,20:23:48.13:531,48,0	0/0:21,0:21:62.98:0,63,546	0/0:23,0:23:56.96:0,57,495	1/1:6,1:33:57.23:289,57,0	1/1:4,1:25:52.66:278,53,0	1/1:2,0:20:39.80:199,40,0	1/1:2,1:16:42.78:232,43,0
chr10	40962598	.	G	GTAGC	31668.78	PASS	AB=0.755;AC=42;AF=0.750;AN=56;BaseQRankSum=-7.804;DP=666;FS=6.209;HRun=0;HaplotypeScore=101.9764;InbreedingCoeff=0.8103;MQ=70.61;MQ0=0;MQRankSum=-7.366;QD=60.44;ReadPosRankSum=1.174;VQSLOD=6.7658;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,50:52:99:3640,135,0	1/1:2,7:12:24.08:644,24,0	0/1:11,0:11:10.78:11,0,447	0/0:15,0:14:37.73:0,38,514	1/1:3,21:28:54.19:1454,54,0	1/1:5,19:24:57.20:1536,57,0	1/1:5,21:30:66.23:1757,66,0	1/1:8,23:34:84.17:1872,84,0	0/0:29,1:30:3.64:0,4,1416	1/1:0,23:23:69.22:1804,69,0	1/1:0,6:6:12.04:322,12,0	0/0:25,0:25:66.20:0,66,1181	0/0:17,0:17:51.17:0,51,967	1/1:4,16:21:51.18:1358,51,0	1/1:2,12:17:36.12:947,36,0	0/1:1,20:27:2.77:1320,0,3	1/1:1,21:23:54.19:1428,54,0	1/1:4,26:31:75.26:2022,75,0	1/1:10,16:26:68.95:1742,69,0	1/1:5,18:23:51.18:1363,51,0	1/1:2,23:26:63.22:1700,63,0	1/1:4,19:24:51.17:1375,51,0	0/0:28,0:28:78.27:0,78,1472	0/0:27,0:27:72.23:0,72,1324	1/1:1,14:15:42.14:1131,42,0	1/1:0,25:26:75.22:1909,75,0	1/1:6,15:23:51.18:1365,51,0	1/1:4,13:18:36.12:968,36,0
chr10	40963605	.	A	ATC	24978.54	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=-15.465;DP=590;FS=7.908;HRun=0;HaplotypeScore=59.0634;InbreedingCoeff=0.9981;MQ=78.85;MQ0=0;MQRankSum=-2.279;QD=56.01;ReadPosRankSum=1.260;VQSLOD=5.0022;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,27:30:72.25:1463,72,0	1/1:0,12:12:36.12:732,36,0	0/0:14,0:14:34.77:0,35,418	0/0:12,0:12:24.04:0,24,323	1/1:2,22:24:66.23:1341,66,0	1/1:1,22:24:63.22:1280,63,0	1/1:1,22:23:63.22:1280,63,0	1/1:5,24:29:84.29:1678,84,0	0/0:25,0:25:75.26:0,75,1217	1/1:0,26:27:81.28:1628,81,0	1/1:0,16:17:45.15:914,45,0	0/0:17,0:17:51.16:0,51,807	0/0:24,0:24:72.24:0,72,1153	1/1:0,13:13:36.12:731,36,0	1/1:1,18:20:57.19:1136,57,0	1/1:1,17:18:51.18:1036,51,0	1/1:0,25:25:63.22:1280,63,0	1/1:0,20:20:51.18:1036,51,0	1/1:1,21:22:63.22:1279,63,0	1/1:0,28:28:84.29:1707,84,0	1/1:0,21:23:57.20:1158,57,0	1/1:0,16:17:48.16:975,48,0	0/0:33,0:33:99:0,99,1554	0/0:19,0:19:54.18:0,54,875	1/1:1,19:20:54.19:1097,54,0	1/1:1,26:27:81.28:1641,81,0	1/1:1,20:21:60.21:1219,60,0	1/1:0,6:6:18.06:366,18,0
chr10	40965001	.	C	CTG	8585.15	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-17.179;DP=740;FS=15.207;HRun=0;HaplotypeScore=102.9929;InbreedingCoeff=0.9996;MQ=91.41;MQ0=1;MQRankSum=-6.620;QD=47.70;ReadPosRankSum=3.425;VQSLOD=4.5416;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,37:39:99:1945,108,0	0/0:13,0:13:36.12:0,36,504	0/0:37,0:37:93.29:0,93,1273	0/0:22,0:22:57.19:0,57,770	1/1:2,27:29:81.28:1455,81,0	0/0:22,0:22:60.20:0,60,840	0/0:21,0:21:48.13:0,48,637	0/0:40,0:39:99:0,99,1342	0/0:22,0:22:63.21:0,63,882	0/0:34,0:34:99:0,99,1370	0/0:24,0:24:66.22:0,66,924	0/0:27,1:28:30.22:0,30,1060	0/0:33,0:33:96.29:0,96,1308	1/1:4,28:32:81.28:1458,81,0	0/0:15,0:15:42.14:0,42,588	1/1:0,17:16:48.16:864,48,0	1/1:3,29:32:78.27:1404,78,0	0/0:14,0:14:33.11:0,33,462	0/0:28,0:28:78.25:0,78,1076	0/0:40,0:40:99:0,111,1555	0/0:29,0:29:87.29:0,87,1219	1/1:0,30:31:81.28:1458,81,0	0/0:32,0:32:93.30:0,93,1285	0/0:22,0:22:66.22:0,66,922	0/0:14,0:14:42.14:0,42,588	0/0:30,0:30:87.28:0,87,1189	0/0:29,0:29:87.29:0,87,1217	0/0:11,0:11:27.09:0,27,378
chr10	40965443	.	G	GA	675.38	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-4.577;DP=646;FS=9.445;HRun=8;HaplotypeScore=94.2247;InbreedingCoeff=0.9359;MQ=76.46;MQ0=0;MQRankSum=-2.750;QD=21.11;ReadPosRankSum=-0.469;VQSLOD=3.0208;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:70.40:0,70,796	0/0:7,0:7:18.01:0,18,165	0/0:18,0:18:35.77:0,36,306	0/0:16,0:16:31.33:0,31,268	0/0:30,0:30:78.03:0,78,714	1/1:3,18:21:45.13:519,45,0	1/1:2,9:11:24.07:277,24,0	0/0:31,0:30:78.01:0,78,707	0/0:27,0:27:68.99:0,69,623	0/0:30,0:30:81:0,81,733	0/0:35,0:35:87.03:0,87,796	0/0:22,0:22:62.99:0,63,568	0/0:12,0:12:5.24:0,5,198	0/0:18,0:18:51.02:0,51,467	0/0:23,0:23:66.01:0,66,596	0/0:22,0:22:54.01:0,54,490	0/0:21,0:21:54.02:0,54,494	0/0:17,0:17:45.02:0,45,412	0/0:23,0:23:60.01:0,60,545	0/0:31,0:31:75.03:0,75,686	0/0:18,0:19:50.03:0,50,440	0/0:22,0:22:51.01:0,51,462	0/0:37,2:40:34.83:0,35,811	0/0:19,0:19:57.03:0,57,521	0/0:19,0:19:54.02:0,54,493	0/0:28,0:28:78.03:0,78,710	0/0:32,0:32:69.02:0,69,631	0/0:13,0:13:33.01:0,33,302
chr10	40965770	.	TAGAG	T	8472.70	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=7.583;DP=827;FS=21.827;HRun=0;HaplotypeScore=243.9457;InbreedingCoeff=0.9196;MQ=52.80;MQ0=9;MQRankSum=-8.655;QD=21.18;ReadPosRankSum=-0.478;VQSLOD=3.1993;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:42.14:0,42,1058	1/1:9,4:13:20.73:294,21,0	0/0:50,0:31:76.05:0,76,1638	0/0:64,0:43:69.27:0,69,1906	0/0:38,0:34:54.16:0,54,819	1/1:15,6:21:11.47:227,11,0	1/1:18,12:29:25.79:500,26,0	1/1:6,32:38:95.99:1675,96,0	0/0:24,0:24:60.21:0,60,1549	1/1:29,9:38:99:1299,104,0	1/1:16,9:25:12.04:209,12,0	0/0:29,0:29:84.27:0,84,2089	0/0:22,0:22:60.21:0,60,1575	0/0:36,0:35:41.83:0,42,563	1/1:9,11:20:20.99:390,21,0	0/0:17,0:17:23.94:0,24,314	0/0:31,0:31:30.22:0,30,513	1/1:4,12:15:19.85:333,20,0	1/1:14,10:23:7.59:605,8,0	1/1:20,12:32:36.05:636,36,0	1/1:14,39:53:5.93:74,6,0	0/0:20,0:20:24.07:0,24,591	0/0:29,0:29:87.30:0,87,2240	0/0:28,0:28:72.25:0,72,1876	1/1:3,11:14:6.02:114,6,0	1/1:19,17:36:98.14:1386,98,0	1/1:26,7:33:43.09:599,43,0	1/1:4,2:6:1.61:131,2,0
chr10	40965774	.	GAGACAC	G	1058.87	PASS	AB=0.927;AC=14;AF=0.250;AN=56;BaseQRankSum=6.496;DP=806;FS=8.088;HRun=0;HaplotypeScore=282.2193;InbreedingCoeff=-0.3212;MQ=52.26;MQ0=12;MQRankSum=-3.731;QD=2.69;ReadPosRankSum=-7.120;VQSLOD=0.0638;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:38,1:39:42.08:0,42,1320	0/1:11,1:12:39.27:39,0,69	0/0:48,0:27:77.70:0,78,1797	0/0:67,0:41:60.80:0,61,2040	0/0:36,0:32:51.17:0,51,869	0/0:19,1:20:12.08:0,12,69	0/1:26,4:29:93.80:94,0,158	0/1:32,2:34:99:148,0,208	0/0:24,0:24:63.20:0,63,2086	0/1:31,4:35:99:299,0,395	0/0:23,2:25:6.87:0,7,40	0/0:29,0:29:84.29:0,84,2817	0/0:20,0:20:60.21:0,60,2094	0/1:35,0:34:6.37:6,0,555	0/1:20,0:20:2.86:3,0,87	0/0:17,0:17:23.97:0,24,287	0/1:29,2:30:47.35:47,0,465	0/1:16,0:15:32.61:33,0,95	0/1:26,0:23:81.41:81,0,384	0/1:28,3:31:62.30:62,0,88	0/1:46,4:49:7.92:8,0,14	0/0:17,1:18:21.07:0,21,755	0/0:30,0:30:90.30:0,90,2887	0/0:26,0:26:75.24:0,75,2438	0/0:14,0:14:5.94:0,6,41	0/1:33,1:34:51.15:51,0,538	0/1:28,4:32:99:248,0,218	0/1:4,3:6:46.79:89,0,47
chr10	40965776	.	GAC	G	1098.24	PASS	AB=0.841;AC=8;AF=0.143;AN=56;BaseQRankSum=2.024;DP=797;FS=1.801;HRun=0;HaplotypeScore=243.3844;InbreedingCoeff=0.6730;MQ=51.17;MQ0=15;MQRankSum=0.594;QD=6.66;ReadPosRankSum=-4.836;VQSLOD=2.5065;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:36.11:0,36,595	0/0:12,0:12:11.47:0,11,54	0/0:49,0:26:53.61:0,54,735	0/0:66,0:38:48.08:0,48,943	1/1:29,6:31:39.07:469,39,0	0/0:20,0:20:8.06:0,8,27	0/0:29,0:28:8.61:0,9,59	0/0:35,0:35:9.47:0,9,55	0/0:23,0:23:57.16:0,57,931	0/0:35,0:35:17.07:0,17,270	0/0:25,0:25:5.81:0,6,18	0/0:29,0:29:78.24:0,78,1279	0/0:21,0:21:60.19:0,60,1005	1/1:30,4:33:22.99:334,23,0	0/0:19,0:19:12.58:0,13,44	1/1:14,2:16:15.02:168,15,0	0/1:16,14:29:0.30:267,0,0	0/0:16,0:15:1.68:0,2,52	0/0:25,0:22:47.63:0,48,267	0/0:30,0:30:15.30:0,15,50	0/1:50,0:49:4.06:6,0,4	0/0:18,0:18:21.07:0,21,363	0/0:31,0:31:84.22:0,84,1330	0/0:25,0:25:69.18:0,69,1102	0/0:14,0:14:5.09:0,5,19	0/0:34,0:34:60.03:0,60,338	0/0:31,0:31:20.49:0,20,158	0/0:7,0:6:7.18:0,7,31
chr10	40965780	.	C	CAGAG	6375.13	PASS	AB=0.830;AC=19;AF=0.339;AN=56;BaseQRankSum=11.023;DP=843;FS=5.401;HRun=0;HaplotypeScore=264.9430;InbreedingCoeff=0.1362;MQ=49.55;MQ0=15;MQRankSum=-10.963;QD=14.86;ReadPosRankSum=0.370;VQSLOD=3.4709;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:35.69:0,36,667	1/1:6,5:11:1.92:170,2,0	0/0:48,0:24:62.79:0,63,1054	0/0:70,0:39:76.56:0,77,1290	0/0:39,0:35:11.24:0,11,227	0/0:10,11:21:5.91:0,6,41	0/1:18,12:29:85.91:135,0,86	1/1:43,0:43:14.97:584,15,0	0/0:25,0:25:60.19:0,60,1163	0/1:22,17:40:0.60:1702,0,1	0/0:16,12:28:6.79:0,7,35	0/0:29,0:29:81.26:0,81,1571	0/0:23,0:23:66.23:0,66,1282	0/1:36,0:35:82.46:82,0,158	0/1:16,6:22:15.10:15,0,51	0/1:18,0:18:35.88:36,0,56	0/1:29,0:28:99:171,0,144	0/1:12,4:15:22.02:254,0,22	0/1:21,9:27:99:786,0,240	0/1:17,11:28:7.39:93,0,7	0/1:44,4:47:2.54:3,0,3	0/0:22,0:22:21.07:0,21,384	0/0:31,0:31:88.53:0,89,1680	0/0:26,0:26:72.20:0,72,1380	0/0:11,3:14:5.91:0,6,38	0/1:26,12:39:83.47:1277,0,83	1/1:11,18:30:30.89:903,31,0	1/1:6,1:6:8.46:163,8,0
chr10	40965782	.	C	CAGAG	3943.88	PASS	AB=0.958;AC=16;AF=0.286;AN=56;BaseQRankSum=10.530;DP=821;FS=4.702;HRun=0;HaplotypeScore=270.0404;InbreedingCoeff=-0.0992;MQ=48.91;MQ0=15;MQRankSum=-7.523;QD=10.27;ReadPosRankSum=-0.030;VQSLOD=2.4899;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:35.68:0,36,645	0/1:11,0:11:84.17:84,0,103	0/0:47,0:20:53.36:0,53,859	0/0:70,0:37:32.31:0,32,1092	1/1:24,14:34:18.64:361,19,0	0/0:21,0:21:11.17:0,11,128	0/1:27,0:26:69.97:70,0,243	0/1:44,0:44:99:284,0,604	0/0:25,0:25:69.17:0,69,1207	0/1:39,0:39:99:864,0,259	0/0:27,0:27:6.02:0,6,112	0/0:27,0:27:78.25:0,78,1496	0/0:23,0:23:66.23:0,66,1270	0/1:16,19:34:20.80:309,0,21	0/0:23,0:23:13.11:0,13,223	1/1:12,6:18:13.23:158,13,0	0/1:23,5:27:45.26:221,0,45	0/1:14,0:13:97:97,0,171	0/1:30,0:25:99:374,0,333	0/1:27,0:27:22.16:22,0,190	0/0:48,0:47:2.18:0,2,35	0/0:22,0:22:21.07:0,21,367	0/0:30,0:30:87.27:0,87,1600	0/0:26,0:26:75.20:0,75,1357	0/0:10,0:10:6.02:0,6,92	0/1:38,0:38:99:593,0,522	0/1:28,0:28:99:438,0,132	0/1:7,0:6:60.80:68,0,61
chr10	40965784	.	C	CAG	1870.64	PASS	AB=0.945;AC=14;AF=0.250;AN=56;BaseQRankSum=11.998;DP=824;FS=3.585;HRun=0;HaplotypeScore=258.1671;InbreedingCoeff=-0.3575;MQ=48.68;MQ0=16;MQRankSum=-11.281;QD=4.77;ReadPosRankSum=0.699;VQSLOD=2.5539;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:39:33.10:0,33,434	0/1:12,0:12:51.41:51,0,91	0/0:46,0:17:36.09:0,36,472	0/0:72,0:37:49.19:0,49,670	0/0:21,14:31:3.83:0,4,110	0/0:22,0:22:11.72:0,12,146	0/1:29,0:27:20.35:20,0,264	0/1:42,0:42:99:175,0,538	0/0:26,0:26:62.93:0,63,811	0/1:40,0:40:99:562,0,126	0/0:27,0:27:5.77:0,6,76	0/0:26,0:26:72.23:0,72,968	0/0:24,0:24:66.15:0,66,837	0/1:15,19:33:48.49:48,0,93	0/0:25,0:25:17.83:0,18,195	0/1:11,6:17:16.23:16,0,42	0/1:23,5:27:72:149,0,72	0/1:14,0:13:76.98:77,0,156	0/1:31,0:26:99:214,0,317	0/1:30,0:29:30.41:30,0,186	0/1:41,0:40:22:22,0,32	0/0:18,0:25:21.05:0,21,260	0/0:29,0:29:81.22:0,81,1056	0/0:25,0:25:66.18:0,66,867	0/0:10,0:10:6.02:0,6,75	0/1:37,0:37:99:351,0,474	0/1:28,0:28:99:252,0,158	0/1:9,0:8:52.19:56,0,52
chr10	40965808	.	C	CACACAGAG	7631.79	PASS	AB=1.000;AC=24;AF=0.444;AN=54;BaseQRankSum=6.031;DP=748;FS=4.019;HRun=0;HaplotypeScore=261.3864;InbreedingCoeff=0.1968;MQ=44.84;MQ0=11;MQRankSum=-5.555;QD=15.67;ReadPosRankSum=-3.610;VQSLOD=3.5017;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:22:0.01:0,0,0	0/1:13,0:13:10.83:61,0,11	0/0:35,0:13:28.55:0,29,554	0/0:65,0:24:15.69:0,16,290	./.	1/1:21,0:21:0.16:1,0,0	0/1:22,0:18:8.17:98,0,8	0/1:43,0:43:99:1034,0,191	0/0:25,0:24:60.15:0,60,1417	0/1:44,0:44:55.70:1899,0,56	1/1:28,0:28:5.54:73,6,0	0/0:26,0:26:72.07:0,72,1399	0/0:27,0:27:72.10:0,72,1436	0/1:26,0:26:0.19:13,0,0	0/1:19,0:19:0.02:1,0,0	0/1:17,0:17:0.01:0,0,0	0/1:21,0:21:52.70:215,0,53	0/1:8,0:8:22.99:23,0,39	0/1:29,0:24:99:678,0,187	1/1:36,0:35:16.99:298,17,0	0/1:29,0:29:0.22:0,0,0	0/1:27,0:27:0:0,0,0	0/0:26,0:26:63.16:0,63,1348	0/0:25,0:25:63.11:0,63,1326	0/0:6,0:6:0:0,0,0	0/1:31,0:31:4.62:1599,0,5	1/1:37,0:37:12.85:1177,13,0	1/1:8,2:13:15.05:462,15,0
chr10	40965812	.	C	CAGAGACAG	10871.60	PASS	AB=0.699;AC=34;AF=0.630;AN=54;BaseQRankSum=0.991;DP=771;FS=1.040;HRun=0;HaplotypeScore=249.8176;InbreedingCoeff=0.6188;MQ=46.18;MQ0=8;MQRankSum=-6.831;QD=21.32;ReadPosRankSum=-4.373;VQSLOD=3.5881;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:7,13:25:0.01:0,0,0	1/1:8,3:11:3.48:95,3,0	0/0:34,0:15:24.07:0,24,392	0/0:69,0:24:5.83:0,6,257	./.	1/1:17,4:21:0.16:1,0,0	1/1:22,0:18:4.57:109,5,0	1/1:45,0:45:81.21:1550,81,0	0/0:25,0:24:57.17:0,57,1294	1/1:37,8:45:82.61:2531,83,0	1/1:25,5:30:8.55:146,9,0	0/0:25,0:25:48.16:0,48,1176	0/0:26,0:26:51.17:0,51,1249	1/1:16,9:28:2.67:33,3,0	0/1:6,14:21:0.02:1,0,0	0/1:7,10:17:0.01:0,0,0	0/1:18,1:19:17.38:313,0,17	1/1:6,1:7:3.01:38,3,0	1/1:26,5:27:33.10:1020,33,0	1/1:31,5:35:32.06:540,32,0	0/1:23,5:28:0.22:0,0,1	0/1:10,17:30:0.01:0,0,0	0/0:24,0:24:54.15:0,54,1240	0/0:25,0:25:57.18:0,57,1217	1/1:5,1:6:2.53:25,3,0	1/1:15,17:35:66.21:2284,66,0	1/1:30,9:39:60.01:1612,60,0	1/1:8,6:13:18.01:575,18,0
chr10	40965832	.	GACAC	G	677.62	PASS	AB=0.897;AC=10;AF=0.179;AN=56;BaseQRankSum=4.771;DP=753;FS=3.141;HRun=0;HaplotypeScore=210.1077;InbreedingCoeff=-0.0563;MQ=55.76;MQ0=7;MQRankSum=-6.285;QD=2.56;ReadPosRankSum=-2.806;VQSLOD=1.8746;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,1:27:11.84:0,12,312	0/0:11,2:13:18.04:0,18,335	0/0:38,0:22:57.09:0,57,1091	0/0:78,0:42:42.64:0,43,1255	0/0:24,3:27:21.05:0,21,464	0/0:14,3:17:9.50:0,10,244	0/0:15,2:13:12.87:0,13,304	0/1:44,10:54:99:555,0,2036	0/0:23,0:22:63.22:0,63,1608	0/1:34,4:38:99:111,0,1646	0/0:23,4:27:20.43:0,20,500	0/0:22,0:22:66.23:0,66,1735	0/0:22,0:22:60.21:0,60,1587	0/1:17,3:20:23.81:24,0,96	1/1:18,1:19:0.86:3,1,0	0/0:19,2:21:35.82:0,36,658	0/0:16,0:16:3.18:0,3,353	0/1:9,1:10:35.56:36,0,338	0/1:23,2:22:37.28:37,0,1064	0/1:33,2:35:23.25:23,0,1121	0/1:21,3:24:0:0,0,1	0/0:26,3:29:2.83:0,3,79	0/0:23,0:23:69.22:0,69,1741	0/0:26,0:26:69.24:0,69,1716	0/0:9,0:9:18.02:0,18,455	0/0:35,3:38:3.67:0,4,1735	0/1:35,5:40:17.63:18,0,1582	0/0:15,0:15:27.09:0,27,627
chr10	40966548	.	AAC	A	17406.65	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=14.749;DP=605;FS=13.486;HRun=0;HaplotypeScore=125.2641;InbreedingCoeff=0.9991;MQ=67.61;MQ0=0;MQRankSum=-3.994;QD=38.26;ReadPosRankSum=1.842;VQSLOD=6.0784;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,20:22:22.32:762,22,0	1/1:0,13:13:33.11:497,33,0	0/0:26,0:21:51.11:0,51,790	0/0:18,0:16:38.41:0,38,499	1/1:0,24:24:60.20:892,60,0	1/1:1,24:25:60.20:896,60,0	1/1:0,18:18:39.09:569,39,0	1/1:3,26:29:78.05:1052,78,0	0/0:26,0:26:78.10:0,78,1200	1/1:2,22:24:69.14:971,69,0	1/1:0,25:25:66.18:972,66,0	0/0:17,0:17:51.17:0,51,871	0/0:17,0:17:51.17:0,51,865	1/1:1,18:19:51.13:744,51,0	1/1:1,26:27:72.14:1094,72,0	1/1:0,13:13:39.13:592,39,0	1/1:1,21:22:54.14:783,54,0	1/1:1,16:17:39.11:569,39,0	1/1:0,9:9:27.07:371,27,0	1/1:1,30:31:81.13:1119,81,0	1/1:1,21:22:57.19:863,57,0	1/1:0,16:16:45.11:657,45,0	0/0:19,0:19:57.18:0,57,928	0/0:26,0:26:69.23:0,69,1176	1/1:0,17:17:42.14:637,42,0	1/1:0,34:34:99:1443,102,0	1/1:1,34:35:93.32:1415,93,0	1/1:0,12:12:36.09:507,36,0
chr10	40966554	.	A	AAAC	7167.28	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=14.557;DP=616;FS=11.937;HRun=0;HaplotypeScore=176.6189;InbreedingCoeff=0.9981;MQ=65.90;MQ0=0;MQRankSum=-6.432;QD=15.25;ReadPosRankSum=0.992;VQSLOD=3.8866;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:21,1:21:47.29:247,47,0	1/1:12,0:12:28.74:164,29,0	0/0:23,0:19:42.97:0,43,620	0/0:16,0:14:18.60:0,19,409	1/1:26,0:26:61.33:435,61,0	1/1:25,0:25:53.49:343,53,0	1/1:19,0:19:35.29:186,35,0	1/1:29,0:29:59.96:479,60,0	0/0:24,0:24:63.21:0,63,1007	1/1:25,0:25:63.99:401,64,0	1/1:25,0:25:58.85:482,59,0	0/0:20,0:20:54.15:0,54,858	0/0:17,0:17:51.17:0,51,845	1/1:19,0:19:44.88:258,45,0	1/1:26,1:27:62.04:356,62,0	1/1:13,0:13:34.88:198,35,0	1/1:21,1:22:53.49:409,53,0	1/1:18,0:18:40.01:194,40,0	1/1:10,0:10:28.33:262,28,0	1/1:29,0:29:64.62:587,65,0	1/1:22,1:23:52.94:275,53,0	1/1:17,0:17:41.30:264,41,0	0/0:20,0:20:60.19:0,60,944	0/0:26,0:26:69.24:0,69,1130	1/1:18,0:18:36.57:236,37,0	1/1:39,0:39:92.49:755,92,0	1/1:38,0:37:84.07:491,84,0	1/1:14,0:14:26.08:145,26,0
chr10	40968164	.	A	AC	5665.98	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-14.373;DP=717;FS=2.461;HRun=5;HaplotypeScore=69.5216;InbreedingCoeff=0.9992;MQ=57.32;MQ0=11;MQRankSum=2.011;QD=34.55;ReadPosRankSum=3.087;VQSLOD=5.1464;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,28:29:75.24:987,75,0	0/0:15,0:15:45.11:0,45,483	0/0:28,0:11:27.03:0,27,279	0/0:40,0:21:53.61:0,54,547	1/1:3,30:33:87.27:1130,87,0	0/0:30,0:30:81.12:0,81,840	0/0:27,0:27:81.20:0,81,870	0/0:31,0:30:81.16:0,81,848	0/0:30,0:30:84.20:0,84,894	0/0:42,0:42:99:0,126,1331	0/0:28,0:28:75.17:0,75,798	0/0:12,0:12:36.09:0,36,387	0/0:9,0:9:24.04:0,24,250	1/1:0,23:23:63.20:829,63,0	0/0:15,0:15:39.09:0,39,413	1/1:1,11:12:33.11:433,33,0	1/1:2,30:32:87.28:1145,87,0	0/0:17,0:17:51.13:0,51,548	0/0:29,0:28:81.19:0,81,862	0/0:41,0:41:99:0,117,1228	0/0:22,0:20:57.14:0,57,613	1/1:5,30:35:87.28:1143,87,0	0/0:26,1:26:69.16:0,69,734	0/0:20,0:20:57.14:0,57,612	0/0:20,0:20:60.13:0,60,627	0/0:29,0:29:84.18:0,84,881	0/0:30,0:30:84.20:0,84,896	0/0:11,0:11:32.87:0,33,311
chr10	40968475	.	AAAG	A	2722.77	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=6.008;DP=675;FS=6.544;HRun=0;HaplotypeScore=107.2251;InbreedingCoeff=0.9990;MQ=67.07;MQ0=2;MQRankSum=0.236;QD=32.03;ReadPosRankSum=2.777;VQSLOD=3.9497;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,99,2100	0/0:10,0:10:27.08:0,27,564	0/0:30,0:28:73.20:0,73,1496	0/0:29,0:27:45.20:0,45,967	1/1:0,20:20:42.14:699,42,0	0/0:20,0:20:51.14:0,51,1060	0/0:23,0:23:54.18:0,54,1161	0/0:32,0:32:81.26:0,81,1712	0/0:31,0:31:90.31:0,90,2019	0/0:23,0:23:66.22:0,66,1434	0/0:22,0:22:66.19:0,66,1384	0/0:17,0:17:51.17:0,51,1101	0/0:20,0:20:60.18:0,60,1266	1/1:0,24:24:54.18:898,54,0	0/0:26,0:26:78.26:0,78,1726	1/1:2,17:19:36.12:598,36,0	1/1:1,21:22:33.16:688,33,0	0/0:9,0:9:24.05:0,24,416	0/0:25,0:25:69.23:0,69,1498	0/0:22,0:22:66.23:0,66,1493	0/0:45,0:45:99:0,120,2646	0/0:29,0:29:84.28:0,84,1853	0/0:14,0:14:42.14:0,42,951	0/0:29,0:29:84.28:0,84,1839	0/0:15,0:15:42.14:0,42,931	0/0:33,0:33:93.32:0,93,2087	0/0:29,0:29:84.18:0,84,1851	0/0:18,0:18:54.19:0,54,1223
chr10	40969093	.	T	TTCTCTCTCTCTCTCTCTCTC	10811.96	PASS	AB=0.978;AC=42;AF=0.750;AN=56;BaseQRankSum=0.662;DP=671;FS=7.192;HRun=0;HaplotypeScore=340.4095;InbreedingCoeff=0.6913;MQ=57.31;MQ0=8;MQRankSum=-6.383;QD=21.62;ReadPosRankSum=-5.435;VQSLOD=1.7218;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:39,0:39:8.10:366,8,0	1/1:8,0:8:6.49:283,6,0	0/0:33,0:22:21.14:0,21,674	0/1:41,0:34:57.73:58,0,182	1/1:20,0:19:18.03:272,18,0	1/1:7,4:17:6.02:560,6,0	1/1:19,0:19:27.08:1031,27,0	1/1:39,0:34:32.46:923,32,0	0/0:26,0:28:68.81:0,69,3114	1/1:12,0:12:15.05:744,15,0	1/1:13,0:13:8.22:110,8,0	0/0:22,0:23:51.10:0,51,2169	0/0:21,0:24:57.19:0,57,2753	1/1:21,0:20:14.78:430,15,0	1/1:34,0:34:6.02:123,6,0	0/1:19,0:19:99:240,0,146	1/1:23,0:23:12.04:375,12,0	1/1:9,0:9:12.04:586,12,0	1/1:28,0:25:27.96:518,28,0	1/1:30,0:30:15.05:575,15,0	1/1:19,0:19:12.04:243,12,0	1/1:31,0:30:14.26:392,14,0	0/0:24,0:27:45.14:0,45,2044	0/0:32,0:35:39.58:0,40,3912	1/1:23,0:23:8.88:115,9,0	1/1:19,0:19:33.04:1223,33,0	1/1:19,0:19:23.53:1312,24,0	1/1:15,0:14:7.48:332,7,0
chr10	40969285	.	G	GTA	8583.55	PASS	AB=0.697;AC=15;AF=0.268;AN=56;BaseQRankSum=7.018;DP=742;FS=9.862;HRun=0;HaplotypeScore=127.6004;InbreedingCoeff=-0.3660;MQ=51.38;MQ0=1;MQRankSum=-14.484;QD=21.57;ReadPosRankSum=2.856;VQSLOD=4.9197;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:87.94:0,88,1702	0/1:5,7:12:99:387,0,183	0/0:22,0:15:35.31:0,35,607	0/0:21,0:19:50.81:0,51,727	0/0:27,0:27:78.27:0,78,1270	0/1:26,12:38:99:564,0,852	0/1:14,6:19:99:136,0,480	0/1:15,12:18:99:506,0,142	0/0:31,0:31:93.29:0,93,1453	0/1:22,21:43:99:1027,0,827	0/1:17,15:33:99:417,0,550	0/0:33,0:33:99:0,99,1587	0/0:25,0:25:75.21:0,75,1171	0/0:27,0:27:78.24:0,78,1222	0/1:22,15:37:99:799,0,777	0/0:24,0:24:42.10:0,42,1065	0/0:21,0:21:25.81:0,26,911	0/1:7,3:9:99:100,0,199	0/1:11,4:15:99:201,0,336	0/1:24,13:35:99:686,0,780	0/1:10,7:17:99:314,0,376	0/0:28,0:28:78.27:0,78,1272	0/0:24,0:24:72.25:0,72,1167	0/0:20,0:20:60.19:0,60,943	0/1:5,22:27:99:1195,0,100	0/1:15,27:42:99:1394,0,522	0/1:16,12:28:99:585,0,601	0/1:6,5:11:99:273,0,191
chr10	40970616	.	TTGTG	T	727.98	PASS	AB=0.908;AC=12;AF=0.240;AN=50;BaseQRankSum=0.309;DP=423;FS=0.946;HRun=0;HaplotypeScore=78.7627;InbreedingCoeff=0.5956;MQ=68.19;MQ0=14;MQRankSum=-0.739;QD=7.83;ReadPosRankSum=4.025;VQSLOD=2.0370;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:23:6.17:22,0,6	0/0:2,0:3:6.02:0,6,105	./.	./.	1/1:5,4:9:6.02:94,6,0	0/0:8,0:21:12.04:0,12,206	0/0:16,0:19:32.85:0,33,649	0/0:28,0:27:26.17:0,26,346	0/0:13,0:17:26.55:0,27,449	0/0:13,0:12:14.99:0,15,174	./.	0/0:8,0:8:21.07:0,21,499	0/1:10,1:12:32.16:32,0,270	1/1:5,9:14:18.06:283,18,0	0/0:11,0:11:9.03:0,9,161	1/1:3,11:14:21.07:330,21,0	1/1:9,6:14:4.53:92,5,0	0/0:8,0:15:9.03:0,9,140	0/0:25,0:22:30.09:0,30,531	0/0:3,0:7:11.07:0,11,162	0/0:22,0:19:15.01:0,15,239	1/1:2,0:6:3:28,3,0	0/0:8,0:7:9.03:0,9,168	0/0:15,0:15:18.06:0,18,427	0/0:11,0:12:8.78:0,9,117	0/0:10,0:20:39.12:0,39,595	0/0:8,0:13:6.02:0,6,89	0/0:4,0:9:9.02:0,9,129
chr10	40978470	.	G	GTC	1666.90	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-6.383;DP=416;FS=5.451;HRun=0;HaplotypeScore=58.8317;InbreedingCoeff=0.8917;MQ=48.28;MQ0=66;MQRankSum=-0.368;QD=30.31;ReadPosRankSum=0.833;VQSLOD=4.8852;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:24:54.17:0,54,674	0/0:7,0:5:9.03:0,9,113	0/0:6,0:5:12.04:0,12,147	0/0:6,0:4:5.28:0,5,103	1/1:1,9:10:21.07:349,21,0	0/0:13,0:9:15.05:0,15,189	0/0:20,0:18:36.11:0,36,454	0/0:15,0:13:30.05:0,30,361	0/0:26,0:20:48.15:0,48,606	0/0:16,0:13:36.12:0,36,454	0/0:8,0:8:18.06:0,18,227	0/0:15,0:8:21.07:0,21,265	0/0:11,0:10:24.08:0,24,302	1/1:4,12:16:36.12:580,36,0	0/0:15,0:12:24.08:0,24,303	1/1:0,9:8:24.08:398,24,0	1/1:7,11:15:30.10:498,30,0	0/0:10,0:6:15.05:0,15,189	0/0:18,0:13:24.07:0,24,299	0/0:16,0:12:33.11:0,33,416	0/0:18,0:14:18.06:0,18,227	0/0:12,0:7:18.06:0,18,227	0/0:18,0:14:39.12:0,39,492	0/0:24,0:21:48.15:0,48,601	0/0:11,0:7:12.04:0,12,151	0/0:20,0:15:39.12:0,39,489	0/0:19,0:16:27.09:0,27,340	0/0:8,0:5:6:0,6,62
chr10	40979446	.	TA	T	6298.18	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=0.789;DP=607;FS=2.260;HRun=9;HaplotypeScore=80.7595;InbreedingCoeff=0.9877;MQ=76.87;MQ0=0;MQRankSum=-1.247;QD=22.90;ReadPosRankSum=1.691;VQSLOD=5.7296;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:2,0:23:56.82:0,57,289	0/0:8,0:8:24.07:0,24,277	0/0:19,0:19:10.03:0,10,341	0/0:12,1:13:20.91:0,21,190	0/0:3,0:24:60.03:0,60,320	0/0:21,0:21:63.19:0,63,727	0/0:19,0:19:51.14:0,51,579	1/1:2,12:14:35.98:319,36,0	0/0:23,1:24:32.71:0,33,622	1/1:6,32:39:99:912,101,0	1/1:4,19:23:54.02:494,54,0	0/0:16,0:16:45.12:0,45,502	0/0:23,0:23:63.19:0,63,725	0/0:6,0:22:42.84:0,43,238	1/1:1,26:27:72.04:659,72,0	0/0:3,0:21:51.30:0,51,280	0/0:6,0:27:56.98:0,57,309	1/1:0,10:10:26.97:247,27,0	1/1:0,21:21:63.02:572,63,0	1/1:7,27:34:75.02:686,75,0	1/1:1,9:10:24.01:220,24,0	0/0:3,0:24:63.19:0,63,356	0/0:27,0:27:69.21:0,69,796	0/0:19,0:21:53.82:0,54,583	1/1:3,19:22:48.02:439,48,0	1/1:3,35:38:99:921,102,0	1/1:6,26:33:80.08:720,80,0	1/1:0,4:4:12.01:110,12,0
chr10	40979733	.	A	AC	3748.77	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=2.767;DP=624;FS=0.408;HRun=2;HaplotypeScore=83.5807;InbreedingCoeff=0.9993;MQ=88.05;MQ0=0;MQRankSum=-1.364;QD=36.40;ReadPosRankSum=1.073;VQSLOD=4.1051;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,102,1249	0/0:10,0:10:30.09:0,30,371	0/0:23,0:23:56.07:0,56,581	0/0:21,0:21:53.70:0,54,561	0/0:19,0:19:51.14:0,51,616	0/0:20,0:20:60.18:0,60,731	0/0:24,0:24:69.15:0,69,810	0/0:31,0:31:69.18:0,69,815	0/0:21,0:21:63.18:0,63,764	1/1:0,30:31:93.25:1237,93,0	1/1:3,21:24:62.98:792,63,0	0/0:18,0:18:51.08:0,51,556	0/0:12,0:12:33.08:0,33,383	0/0:20,0:20:60.19:0,60,740	1/1:0,20:20:48.16:671,48,0	0/0:13,0:13:39.12:0,39,482	0/0:33,0:33:99:0,99,1210	1/1:1,13:14:39.13:545,39,0	0/0:20,0:20:54.13:0,54,633	0/0:40,0:40:99:0,117,1386	0/0:24,0:24:69.19:0,69,827	0/0:28,0:28:84.15:0,84,966	0/0:26,0:26:78.17:0,78,909	0/0:22,0:22:66.18:0,66,799	1/1:1,13:14:36.12:504,36,0	0/0:35,1:36:54.30:0,54,1088	0/0:18,0:18:51.16:0,51,630	0/0:8,0:8:24.05:0,24,281
chr10	40980668	.	ATACATTTG	A	14906.67	PASS	AB=0.509;AC=29;AF=0.518;AN=56;BaseQRankSum=15.959;DP=469;FS=2.066;HRun=0;HaplotypeScore=128.0663;InbreedingCoeff=0.9112;MQ=73.81;MQ0=0;MQRankSum=-14.503;QD=61.85;ReadPosRankSum=0.352;VQSLOD=5.0415;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:51.16:0,51,1961	1/1:1,6:7:17.99:447,18,0	0/0:13,0:13:39.06:0,39,1045	0/0:10,0:10:24.08:0,24,912	0/0:30,0:30:87.30:0,87,3754	1/1:0,18:18:39.13:1116,39,0	1/1:1,10:11:24.08:687,24,0	1/1:2,12:14:33.03:797,33,0	0/0:18,0:18:51.18:0,51,2193	1/1:0,21:21:55.38:1483,55,0	1/1:2,25:27:69.11:1831,69,0	0/0:18,0:18:48.16:0,48,1933	0/0:13,0:13:39.13:0,39,1633	0/0:15,0:15:39.13:0,39,1658	1/1:1,13:14:27.09:773,27,0	0/0:5,0:5:12.04:0,12,536	0/0:19,0:19:54.19:0,54,2357	1/1:3,5:8:21.07:549,21,0	1/1:3,3:6:12.04:333,12,0	1/1:2,26:28:74.86:1625,75,0	1/1:2,7:9:14.88:235,15,0	0/0:14,0:14:42.14:0,42,1840	0/0:28,0:28:81.26:0,81,3346	0/0:27,0:27:78.25:0,78,3189	1/1:4,10:14:33.11:936,33,0	0/1:1,26:28:56.03:1869,0,56	1/1:3,24:27:66.23:1882,66,0	1/1:0,9:9:12.04:344,12,0
chr10	40980763	.	AC	A	1161.57	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=8.408;DP=492;FS=1.050;HRun=1;HaplotypeScore=99.6833;InbreedingCoeff=0.8436;MQ=70.57;MQ0=0;MQRankSum=-5.533;QD=10.28;ReadPosRankSum=-5.221;VQSLOD=-0.4279;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,11:20:47.59:479,48,0	0/0:4,0:4:8.34:0,8,72	0/0:25,0:20:26.37:0,26,338	0/0:12,0:8:6.05:0,6,122	1/1:24,2:26:34.84:226,35,0	0/0:20,0:20:53.91:0,54,655	0/0:15,0:15:45.01:0,45,503	0/0:15,0:15:42.12:0,42,510	0/0:15,0:15:45.11:0,45,537	0/0:19,0:19:57.04:0,57,638	0/0:21,0:21:55.17:0,55,660	0/0:13,0:13:39.08:0,39,449	0/0:11,0:11:33.07:0,33,387	1/1:20,2:22:16.83:137,17,0	0/0:18,0:18:48.15:0,48,599	0/1:16,0:16:28.16:34,0,28	1/1:19,0:19:22.14:157,22,0	0/0:23,0:23:57.28:0,57,708	0/0:18,0:18:32.12:0,32,454	0/0:22,0:22:52.34:0,52,639	0/0:12,0:12:30.09:0,30,374	1/1:4,6:10:28.27:305,28,0	0/0:17,0:17:51.10:0,51,596	0/0:21,0:21:60.18:0,60,741	0/0:25,0:25:63.15:0,63,763	0/0:20,0:20:57.18:0,57,713	0/0:25,0:25:69.11:0,69,830	0/0:8,0:8:12.04:0,12,144
chr10	40980772	.	C	CAA	12310.57	PASS	AB=0.574;AC=40;AF=0.714;AN=56;BaseQRankSum=-5.514;DP=497;FS=0.445;HRun=7;HaplotypeScore=68.3457;InbreedingCoeff=0.7783;MQ=67.98;MQ0=0;MQRankSum=-3.057;QD=31.89;ReadPosRankSum=0.429;VQSLOD=4.6684;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:10,0:26:7.74:219,0,8	1/1:0,3:3:3.48:51,3,0	0/0:23,0:17:6.55:0,7,183	0/0:13,0:9:8.39:0,8,88	1/1:15,0:24:49.43:436,49,0	1/1:9,15:24:69.13:1042,69,0	1/1:2,10:12:30.10:507,30,0	1/1:3,13:16:42.09:650,42,0	0/0:16,0:16:48.15:0,48,584	1/1:1,15:16:45.13:724,45,0	1/1:0,19:19:54.10:837,54,0	0/0:13,0:13:36.11:0,36,438	0/0:9,0:9:21.06:0,21,256	1/1:3,1:22:24.01:227,24,0	1/1:0,19:19:51.17:842,51,0	0/1:2,1:18:9.45:195,0,9	1/1:6,0:24:19.03:173,19,0	1/1:0,21:21:57.19:951,57,0	1/1:3,15:18:44.15:642,44,0	1/1:8,11:19:48.16:780,48,0	1/1:1,14:15:30.10:507,30,0	1/1:4,0:8:18.41:170,18,0	0/0:15,0:15:42.13:0,42,511	0/0:22,0:22:60.19:0,60,731	1/1:1,24:25:57.20:964,57,0	1/1:1,20:21:60.19:976,60,0	1/1:10,19:29:78.25:1264,78,0	1/1:4,3:7:9.03:152,9,0
chr10	40981048	.	TA	T	7818.31	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=7.705;DP=473;FS=9.070;HRun=9;HaplotypeScore=67.2899;InbreedingCoeff=0.9420;MQ=73.91;MQ0=2;MQRankSum=-3.780;QD=22.53;ReadPosRankSum=1.387;VQSLOD=5.5985;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,24:25:72.04:659,72,0	1/1:2,2:4:6:55,6,0	0/0:27,0:18:22.29:0,22,241	0/0:23,0:16:15.58:0,16,233	1/1:4,20:24:57:521,57,0	1/1:4,21:25:57.03:522,57,0	1/1:0,5:5:15.01:137,15,0	1/1:4,14:18:42.01:384,42,0	0/0:13,0:13:9.51:0,10,322	1/1:0,18:18:54.03:494,54,0	1/1:1,13:14:36.02:329,36,0	0/0:17,0:18:35.94:0,36,395	0/0:16,0:16:45.13:0,45,519	1/1:3,21:24:57.03:521,57,0	1/1:2,10:12:30.02:275,30,0	1/1:2,9:11:21.01:192,21,0	1/1:4,18:22:54.01:494,54,0	1/1:2,11:13:24.01:220,24,0	1/1:1,17:18:51.01:462,51,0	1/1:4,15:19:42.02:384,42,0	1/1:3,7:10:21.01:192,21,0	1/1:2,2:4:6:55,6,0	0/0:19,0:19:45.13:0,45,515	0/0:7,0:7:15.04:0,15,173	1/1:2,25:27:66.04:604,66,0	1/1:4,12:16:36.02:329,36,0	1/1:2,19:21:57.02:522,57,0	1/1:0,17:17:51.03:467,51,0
chr10	40981801	.	A	ATGTGTGTGTGTG	10454.13	PASS	AB=0.955;AC=42;AF=0.750;AN=56;BaseQRankSum=-5.806;DP=641;FS=47.753;HRun=0;HaplotypeScore=251.2791;InbreedingCoeff=0.7343;MQ=61.44;MQ0=4;MQRankSum=-7.419;QD=22.10;ReadPosRankSum=-6.128;VQSLOD=1.1159;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:25:5.73:118,6,0	1/1:12,1:15:9.03:359,9,0	0/1:39,0:23:8.98:9,0,65	0/0:26,0:16:18.05:0,18,415	0/1:9,0:10:0:1,0,0	1/1:11,1:14:3.01:145,3,0	1/1:27,0:29:14.95:422,15,0	1/1:30,0:29:37.67:1228,38,0	0/0:9,0:38:16.67:0,17,90	1/1:11,0:17:36.12:960,36,0	1/1:12,0:21:5.92:221,6,0	0/0:9,0:23:9.92:0,10,124	0/0:13,0:32:18.77:0,19,157	1/1:25,0:24:11.98:313,12,0	1/1:14,0:22:24.08:792,24,0	1/1:17,0:17:6.02:254,6,0	1/1:20,4:26:21:760,21,0	1/1:14,0:16:15.05:390,15,0	1/1:18,0:18:18.05:520,18,0	1/1:11,3:15:14.99:790,15,0	1/1:42,1:43:20.75:297,21,0	1/1:22,0:22:12:365,12,0	0/0:10,0:26:16.70:0,17,141	0/0:10,0:23:10.32:0,10,63	1/1:12,0:17:15.03:320,15,0	1/1:18,6:26:36.08:945,36,0	1/1:11,3:15:18.06:838,18,0	1/1:4,2:6:9:407,9,0
chr10	40981917	.	A	ATGTG	13924.46	PASS	AB=0.728;AC=40;AF=0.714;AN=56;BaseQRankSum=-5.136;DP=641;FS=0.000;HRun=0;HaplotypeScore=144.4761;InbreedingCoeff=0.7669;MQ=60.20;MQ0=4;MQRankSum=-5.761;QD=33.80;ReadPosRankSum=1.457;VQSLOD=4.4896;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,0:9:2.50:52,2,0	1/1:3,0:12:21.07:367,21,0	0/0:45,0:30:42.05:0,42,608	0/0:29,0:23:26.20:0,26,345	1/1:10,8:19:32.68:596,33,0	1/1:6,13:21:41.88:972,42,0	1/1:5,7:13:19.31:446,19,0	0/1:22,2:25:24.82:248,0,25	0/0:33,0:34:75.23:0,75,1192	1/1:6,7:15:24.08:554,24,0	0/1:4,13:18:14.10:716,0,14	0/0:29,0:29:51.16:0,51,824	0/0:39,0:39:99:0,102,1698	1/1:11,15:27:41.88:971,42,0	1/1:8,9:18:24.08:554,24,0	1/1:6,16:22:39.13:959,39,0	1/1:6,11:18:24.08:590,24,0	1/1:2,7:9:18.06:443,18,0	1/1:4,1:5:3.01:74,3,0	1/1:8,18:29:44.62:980,45,0	1/1:13,32:46:46.67:1180,47,0	1/1:9,0:16:15.05:262,15,0	0/0:28,0:29:59.53:0,60,1099	0/0:23,0:23:45.14:0,45,721	1/1:10,18:28:45.15:1105,45,0	1/1:7,18:28:63.17:1431,63,0	1/1:8,11:19:30.10:735,30,0	1/1:4,9:15:32.58:690,33,0
chr10	40981959	.	ATGTTTG	A	321.89	PASS	AB=0.905;AC=9;AF=0.161;AN=56;BaseQRankSum=10.360;DP=548;FS=8.426;HRun=0;HaplotypeScore=260.6659;InbreedingCoeff=-0.1852;MQ=55.81;MQ0=0;MQRankSum=-6.680;QD=2.51;ReadPosRankSum=-0.545;VQSLOD=1.2301;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:9,1:10:18.06:0,18,610	0/0:14,0:14:18.88:0,19,1056	0/0:13,0:9:10.37:0,10,334	0/1:7,0:6:8.69:9,0,22	0/0:19,4:23:25.99:0,26,1378	0/0:20,0:23:12.07:0,12,1653	0/0:20,0:20:54.18:0,54,1607	0/0:36,0:36:99:0,105,3588	0/0:31,0:31:87.30:0,87,3061	0/1:14,0:14:12.11:12,0,1059	0/0:24,0:24:5.54:0,6,1214	0/0:17,0:17:48.15:0,48,1673	0/0:40,0:40:99:0,120,4166	0/1:17,8:25:99:160,0,1124	0/1:8,0:8:16.82:17,0,454	0/1:15,4:19:69.43:69,0,1064	0/1:11,5:17:99:130,0,828	0/0:7,0:7:5.01:0,5,453	0/0:7,0:7:21.07:0,21,745	0/0:28,0:29:29.97:0,30,2106	0/0:18,0:18:33.03:0,33,905	0/1:15,4:19:47.73:48,0,1015	0/0:31,0:31:93.32:0,93,3327	0/0:22,0:22:64.10:0,64,2298	0/0:31,0:31:46.80:0,47,2479	0/0:24,0:24:52.97:0,53,2502	0/1:8,0:8:3.99:4,0,458	0/1:11,0:11:2.55:3,0,955
chr10	40981974	.	GTA	G	365.94	PASS	AB=0.820;AC=12;AF=0.214;AN=56;BaseQRankSum=10.683;DP=521;FS=10.899;HRun=0;HaplotypeScore=238.0866;InbreedingCoeff=-0.3055;MQ=59.79;MQ0=0;MQRankSum=-5.970;QD=2.12;ReadPosRankSum=2.406;VQSLOD=1.0482;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:9,1:10:12.43:0,12,211	0/0:10,1:11:1.85:0,2,463	0/0:14,0:11:29.89:0,30,500	0/0:6,0:5:6.02:0,6,110	0/0:19,5:24:49.45:0,49,798	0/0:24,0:24:6.92:0,7,527	0/0:20,0:20:33.19:0,33,856	0/0:39,0:39:64.86:0,65,1592	0/0:28,0:28:78.23:0,78,1353	0/1:11,3:14:76.59:77,0,451	0/1:14,9:23:56.53:57,0,519	0/0:17,0:17:48.12:0,48,786	0/0:37,0:37:99:0,111,1849	0/1:13,9:22:64.37:64,0,556	0/1:4,2:6:49.24:49,0,200	0/1:10,5:15:44.72:45,0,353	0/1:9,5:14:65.93:66,0,246	0/1:5,1:6:11.75:12,0,100	0/1:5,0:5:9.82:10,0,122	0/1:23,5:28:43.77:44,0,810	0/0:12,0:12:15.03:0,15,228	0/0:15,5:20:0.29:0,0,664	0/0:34,0:34:99:0,102,1763	0/0:22,0:22:66.20:0,66,1166	0/0:27,3:30:6.92:0,7,1105	0/1:23,1:24:4.97:5,0,912	0/1:5,1:6:34.86:35,0,170	0/1:8,2:10:47.17:47,0,253
chr10	40981999	.	C	CAT	2246.72	PASS	AB=0.875;AC=21;AF=0.375;AN=56;BaseQRankSum=4.014;DP=451;FS=3.517;HRun=0;HaplotypeScore=253.3875;InbreedingCoeff=-0.1883;MQ=51.98;MQ0=0;MQRankSum=-6.959;QD=8.26;ReadPosRankSum=2.911;VQSLOD=3.3608;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:8,0:8:27.26:31,0,27	0/1:8,0:11:9.78:83,0,10	0/0:13,0:9:0.90:0,1,132	0/0:6,0:5:0.42:0,0,30	1/1:23,0:23:0.13:178,0,0	0/1:16,4:20:88.86:334,0,89	0/1:15,3:18:26.88:104,0,27	0/0:32,0:32:36.68:0,37,175	0/0:25,0:25:66.14:0,66,789	0/1:14,3:17:95.34:124,0,95	0/1:15,3:19:21.43:159,0,21	0/0:17,0:17:45.13:0,45,565	0/0:28,0:28:69.21:0,69,873	0/1:21,0:21:6.02:151,0,6	1/1:3,1:4:5.79:62,6,0	0/1:22,0:22:31.99:32,0,117	0/1:9,0:10:21.80:40,0,22	0/1:5,0:5:6.54:8,0,7	0/0:1,0:1:2.84:0,3,14	0/1:17,6:23:5.57:267,0,6	0/0:2,1:4:0.89:0,1,2	1/1:19,0:20:8.16:205,8,0	0/0:35,0:35:84.23:0,84,1051	0/0:18,0:18:54.02:0,54,651	0/1:15,10:25:1.70:422,0,2	0/1:11,2:13:19.71:131,0,20	0/1:8,1:9:30.55:31,0,49	0/1:2,2:4:19.26:40,0,19
chr10	40982004	.	ATATATGTGTG	A	11389.57	PASS	AB=0.681;AC=22;AF=0.393;AN=56;BaseQRankSum=10.631;DP=434;FS=5.598;HRun=0;HaplotypeScore=260.6721;InbreedingCoeff=-0.4842;MQ=51.22;MQ0=0;MQRankSum=-11.216;QD=39.27;ReadPosRankSum=-5.474;VQSLOD=3.1670;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:4,4:8:84.84:379,0,85	0/1:7,3:10:99:257,0,220	0/0:12,0:8:18.04:0,18,735	0/0:6,0:5:12.03:0,12,189	0/1:11,11:22:99:401,0,298	0/1:7,13:20:99:1101,0,519	0/1:11,5:16:99:279,0,408	0/1:12,16:28:99:1447,0,279	0/0:27,0:27:75.26:0,75,3599	0/1:5,10:15:99:974,0,253	0/1:8,10:18:99:656,0,245	0/0:20,0:20:54.19:0,54,2616	0/0:28,0:28:81.26:0,81,4058	0/1:8,12:20:99:598,0,258	0/1:1,2:3:68.87:156,0,69	0/1:6,16:22:99:1439,0,159	0/1:3,6:9:85.86:427,0,86	0/1:3,1:4:35.31:96,0,35	1/1:0,1:1:3.01:102,3,0	0/1:9,13:22:99:752,0,425	0/1:5,0:5:0:0,0,0	0/1:11,7:18:99:485,0,359	0/0:32,0:32:90.31:0,90,4667	0/0:18,0:19:56:0,56,2711	0/1:17,8:25:99:606,0,610	0/1:7,4:11:99:375,0,376	0/1:2,7:9:88.61:665,0,89	0/1:2,2:4:67.62:194,0,68
chr10	40982012	.	G	GTATAA	948.35	PASS	AB=0.963;AC=14;AF=0.250;AN=56;BaseQRankSum=3.498;DP=430;FS=0.000;HRun=0;HaplotypeScore=281.6626;InbreedingCoeff=-0.2180;MQ=50.54;MQ0=0;MQRankSum=-7.046;QD=6.41;ReadPosRankSum=-2.332;VQSLOD=1.7222;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:17.14:0,17,158	0/1:8,0:8:54.89:165,0,55	0/0:13,0:12:26.45:0,26,458	0/0:4,0:3:3.01:0,3,33	0/0:24,0:24:23.02:0,23,298	0/1:19,1:20:41.87:42,0,559	0/0:15,0:15:17.64:0,18,215	0/0:17,0:17:41.87:0,42,407	0/0:30,0:30:81.24:0,81,1694	0/1:17,0:17:92.89:93,0,285	0/1:16,0:16:92.16:183,0,92	0/0:25,0:25:60.19:0,60,1292	0/0:28,0:28:84.27:0,84,1826	0/0:20,0:20:50.79:0,51,677	0/1:4,0:4:28.11:37,0,28	0/0:22,0:22:56.13:0,56,610	0/1:10,0:10:35.95:36,0,251	0/1:1,2:3:25.85:175,0,26	0/0:2,0:2:1.61:0,2,32	0/1:21,0:21:85.30:85,0,105	1/1:3,1:4:3.01:68,3,0	0/0:16,0:16:34.60:0,35,356	0/0:33,0:33:93.31:0,93,2051	0/0:23,0:23:66.13:0,66,1316	0/1:20,0:20:63.13:63,0,108	0/1:10,0:10:89.67:106,0,90	0/1:9,0:9:8.47:8,0,140	0/1:6,0:6:40.34:40,0,55
chr10	40982016	.	GTGTT	G	2582.39	PASS	AB=0.961;AC=24;AF=0.429;AN=56;BaseQRankSum=13.768;DP=469;FS=2.366;HRun=0;HaplotypeScore=280.0134;InbreedingCoeff=0.0388;MQ=50.19;MQ0=0;MQRankSum=-11.992;QD=8.52;ReadPosRankSum=2.800;VQSLOD=2.4874;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:9,2:11:23.63:122,0,24	1/1:8,0:8:9.15:62,9,0	0/0:14,0:12:22.98:0,23,456	0/0:4,0:3:8.88:0,9,62	0/1:18,9:27:59.12:251,0,59	0/1:23,0:23:40.61:41,0,110	0/1:15,0:15:2.18:2,0,136	0/1:27,0:27:99:114,0,103	0/0:29,0:29:75.19:0,75,1878	0/1:21,0:21:23.46:76,0,23	0/1:17,0:17:8.28:38,0,8	0/0:24,0:24:65.41:0,65,1445	0/0:30,0:30:90.26:0,90,2190	1/1:12,7:19:46.89:910,47,0	1/1:4,0:4:2.23:8,2,0	1/1:20,3:23:29.64:379,30,0	0/1:10,2:12:16.13:213,0,16	0/1:4,0:4:1.06:1,0,19	0/0:6,0:6:7.53:0,8,93	0/1:23,0:23:2.08:2,0,73	0/0:5,1:6:1.78:0,2,18	1/1:11,7:18:11.97:428,12,0	0/0:31,0:31:93.21:0,93,2376	0/0:22,0:22:49.28:0,49,1451	0/1:22,0:22:18.30:27,0,18	0/1:12,0:12:24.33:24,0,45	0/1:10,0:10:0.29:47,0,0	0/1:7,0:7:6.41:6,0,12
chr10	40982041	.	CAT	C	33.20	PASS	AB=0.991;AC=7;AF=0.125;AN=56;BaseQRankSum=6.043;DP=503;FS=12.503;HRun=0;HaplotypeScore=287.2053;InbreedingCoeff=0.1464;MQ=45.89;MQ0=2;MQRankSum=-4.052;QD=0.29;ReadPosRankSum=-4.318;VQSLOD=0.3181;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:8.44:0,8,67	0/0:7,0:7:4.32:0,4,10	0/0:5,0:4:0:0,0,0	0/0:4,0:3:0.47:0,0,1	0/1:31,0:31:36.60:37,0,78	0/0:23,0:23:9.95:0,10,98	0/0:12,0:12:10.72:0,11,56	0/0:47,0:47:87.48:0,87,537	0/0:26,2:28:19.40:0,19,725	0/0:22,0:22:36.23:0,36,141	0/1:23,0:23:6.33:6,0,13	0/0:21,1:22:10.48:0,10,610	0/0:32,0:32:72.64:0,73,1069	0/0:24,0:24:4:0,4,14	0/0:4,0:4:2.13:0,2,6	0/0:21,0:21:13.70:0,14,37	0/1:13,0:13:12.87:13,0,27	0/0:5,0:4:5.44:0,5,37	0/0:12,0:10:15.77:0,16,100	0/1:21,0:21:19.42:29,0,19	1/1:4,0:5:2.92:18,3,0	0/1:20,1:21:8.51:48,0,9	0/0:27,2:28:28.28:0,28,808	0/0:25,0:25:60.14:0,60,911	0/0:16,0:16:9.66:0,10,48	0/0:16,0:16:21.20:0,21,71	0/0:14,0:14:10.41:0,10,34	0/0:6,0:6:9.65:0,10,36
chr10	40982054	.	ATGTGTG	A	5712.05	PASS	AB=0.681;AC=37;AF=0.661;AN=56;BaseQRankSum=12.004;DP=466;FS=0.000;HRun=0;HaplotypeScore=227.8362;InbreedingCoeff=0.6136;MQ=42.39;MQ0=3;MQRankSum=-10.472;QD=18.25;ReadPosRankSum=-0.299;VQSLOD=4.2762;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:5,1:16:59.35:149,0,59	1/1:2,0:6:8.99:104,9,0	0/0:10,0:4:12.04:0,12,345	0/0:11,0:6:2.93:0,3,237	1/1:10,12:23:19.06:254,19,0	1/1:11,2:21:27.61:383,28,0	1/1:2,3:18:19.09:250,19,0	0/1:28,2:41:76:554,0,76	0/0:24,0:24:54.19:0,54,1634	1/1:8,4:22:44.20:461,44,0	1/1:7,2:16:10.63:154,11,0	0/0:20,0:20:51.16:0,51,1503	0/0:28,0:28:67.47:0,67,2128	1/1:6,7:14:18.06:389,18,0	1/1:0,2:2:6.02:130,6,0	1/1:7,11:20:36.12:755,36,0	1/1:12,2:14:9:122,9,0	0/0:6,0:5:3.01:0,3,32	0/1:5,1:7:26.57:111,0,27	1/1:5,2:15:9.90:172,10,0	1/1:5,1:8:1.21:4,1,0	1/1:11,0:16:17.14:203,17,0	0/0:25,0:24:51.17:0,51,1567	0/0:29,0:29:66.14:0,66,2095	1/1:5,1:12:18.25:170,18,0	1/1:5,4:15:21.76:539,22,0	1/1:1,6:13:38.87:533,39,0	1/1:7,2:11:6:277,6,0
chr10	40982091	.	C	CAT	665.67	PASS	AB=0.894;AC=14;AF=0.250;AN=56;BaseQRankSum=7.647;DP=568;FS=10.254;HRun=0;HaplotypeScore=165.7959;InbreedingCoeff=-0.3300;MQ=56.49;MQ0=2;MQRankSum=-8.081;QD=2.63;ReadPosRankSum=0.160;VQSLOD=2.0828;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:57.19:0,57,835	0/1:4,2:6:12.19:12,0,38	0/0:30,0:24:58.85:0,59,772	0/0:33,0:21:53.10:0,53,575	0/0:20,2:22:18.09:0,18,465	0/1:18,2:20:27.77:28,0,484	0/1:23,1:24:12.48:12,0,467	0/1:36,4:40:99:258,0,872	0/0:29,0:29:81.16:0,81,1050	0/1:21,3:24:99:112,0,531	0/1:20,2:22:21.26:21,0,527	0/0:24,0:24:63.08:0,63,807	0/0:24,0:24:69.17:0,69,933	0/0:16,0:16:36.10:0,36,505	0/1:7,1:8:27.14:27,0,262	0/0:18,0:18:24:0,24,324	0/0:16,0:16:41.46:0,41,538	0/0:5,0:5:15.05:0,15,220	0/1:14,1:16:95.83:96,0,357	0/1:13,2:15:42.08:42,0,281	0/0:17,0:17:35.71:0,36,528	0/1:15,3:18:24.63:25,0,481	0/0:19,0:18:51.14:0,51,707	0/0:34,0:34:93.24:0,93,1300	0/1:13,1:14:15.39:15,0,447	0/1:16,3:19:89.23:89,0,544	0/1:13,0:12:35.03:35,0,336	0/1:12,2:14:48.56:49,0,445
chr10	40983435	.	GT	G	4254.57	PASS	AB=0.769;AC=42;AF=0.750;AN=56;BaseQRankSum=7.053;DP=626;FS=5.270;HRun=13;HaplotypeScore=97.6891;InbreedingCoeff=0.3075;MQ=71.95;MQ0=0;MQRankSum=0.044;QD=7.61;ReadPosRankSum=2.477;VQSLOD=4.1771;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:37:56.71:164,57,0	1/1:2,0:11:12.21:35,12,0	0/1:22,1:21:4.96:5,0,87	0/1:15,0:14:31.08:31,0,46	1/1:6,1:31:47.72:151,48,0	1/1:5,0:21:32.58:94,33,0	1/1:6,0:28:34.61:100,35,0	1/1:12,24:39:23.49:440,23,0	0/0:24,2:27:22.07:0,22,501	1/1:6,13:19:36.97:265,37,0	0/1:6,13:20:14.57:225,0,15	0/0:17,3:21:4.09:0,4,347	0/0:15,1:19:24.97:0,25,361	1/1:1,0:16:26.48:78,26,0	1/1:3,11:15:34.83:247,35,0	1/1:2,2:15:21.28:75,21,0	1/1:6,1:28:41.64:134,42,0	1/1:6,12:19:32.27:226,32,0	1/1:7,16:25:48.72:338,49,0	1/1:5,19:25:40.90:305,41,0	0/1:8,11:19:45.80:199,0,46	1/1:7,0:24:30.51:88,31,0	0/1:17,2:19:4.78:5,0,272	0/1:21,4:25:8.66:9,0,399	1/1:3,15:20:48.78:340,49,0	0/1:10,12:23:19.66:202,0,20	1/1:10,17:28:26.46:348,26,0	0/1:4,7:12:0.29:152,0,0
chr10	40983862	.	ATGTGTGTGTGTGTGT	A	13494.02	PASS	AB=0.577;AC=47;AF=0.839;AN=56;BaseQRankSum=-0.286;DP=517;FS=98.572;HRun=0;HaplotypeScore=179.2647;InbreedingCoeff=0.1387;MQ=50.71;MQ0=86;MQRankSum=-3.145;QD=27.77;ReadPosRankSum=-0.304;VQSLOD=0.1470;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,20:22:5.92:42,6,0	1/1:0,7:7:9.03:407,9,0	0/1:22,0:11:30.33:30,0,239	0/0:31,0:12:13.95:0,14,348	1/1:0,11:14:9.03:399,9,0	1/1:0,6:10:18.06:654,18,0	1/1:0,18:18:6.02:279,6,0	1/1:0,20:20:60.16:826,60,0	0/1:1,0:16:87.58:88,0,1113	1/1:0,22:24:52.18:1646,52,0	1/1:0,15:16:15.05:655,15,0	0/1:0,0:21:99:169,0,1425	0/1:0,0:17:41.55:42,0,1290	1/1:0,10:12:18.43:703,18,0	1/1:0,16:17:21.07:930,21,0	1/1:0,9:9:18.06:836,18,0	1/1:0,0:4:12.04:179,12,0	1/1:0,7:7:6.02:279,6,0	1/1:1,15:16:44.71:617,45,0	1/1:1,16:18:15.05:539,15,0	0/1:0,18:18:0:0,0,0	1/1:0,25:25:30.12:1338,30,0	0/1:1,0:10:1.64:2,0,321	0/1:1,0:16:37.67:38,0,1298	1/1:0,13:14:15.05:697,15,0	1/1:1,23:23:54.14:1940,54,0	1/1:0,4:4:3.01:139,3,0	1/1:1,0:1:2.98:21,3,0
chr10	40983937	.	A	AT	1786.57	PASS	AB=0.922;AC=44;AF=0.846;AN=52;BaseQRankSum=-2.447;DP=311;FS=6.861;HRun=2;HaplotypeScore=361.4503;InbreedingCoeff=0.2281;MQ=67.93;MQ0=1;MQRankSum=-0.218;QD=6.06;ReadPosRankSum=-2.147;VQSLOD=-0.6938;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:4:3.64:37,4,0	0/1:9,0:9:3.31:3,0,3	0/1:7,4:11:8.88:148,0,9	0/1:20,1:20:7.30:231,0,7	1/1:16,0:16:7.20:48,7,0	1/1:11,0:11:2.92:9,3,0	1/1:9,0:9:9.28:31,9,0	1/1:14,0:14:20.27:78,20,0	1/1:12,0:12:16.38:106,16,0	1/1:25,0:25:28.81:155,29,0	1/1:13,0:13:13.54:97,14,0	1/1:8,0:8:10.17:62,10,0	1/1:5,0:5:2.56:54,3,0	0/0:10,0:10:3.59:0,4,11	1/1:15,0:15:3.68:70,4,0	1/1:15,0:15:8.99:113,9,0	1/1:3,0:3:2.12:8,2,0	1/1:1,0:1:2.60:10,3,0	1/1:10,0:10:19.29:139,19,0	1/1:20,0:20:19.42:95,19,0	./.	1/1:22,0:22:17.19:188,17,0	1/1:12,0:12:6.59:20,7,0	1/1:7,0:7:6.16:72,6,0	1/1:16,0:16:15.32:88,15,0	0/1:16,0:15:3.16:43,0,3	0/0:6,0:6:6.09:0,6,28	./.
chr10	40983938	.	T	TTC	481.51	PASS	AB=0.936;AC=15;AF=0.750;AN=20;BaseQRankSum=-0.857;DP=43;FS=0.000;HRun=0;HaplotypeScore=46.4948;InbreedingCoeff=-0.0909;MQ=166.32;MQ0=1;MQRankSum=-2.432;QD=11.74;ReadPosRankSum=-1.277;VQSLOD=2.7335;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/1:10,0:11:33.64:117,0,34	0/1:15,5:20:99:261,0,155	0/0:1,0:1:0:0,0,0	./.	1/1:1,0:1:3:26,3,0	1/1:2,0:2:3:25,3,0	1/1:1,0:1:2.98:21,3,0	./.	./.	1/1:1,0:1:2.97:20,3,0	1/1:1,0:1:2.99:24,3,0	./.	./.	./.	./.	./.	1/1:2,0:2:6:68,6,0	./.	./.	./.	0/1:1,0:1:0:0,0,0	./.	./.	./.	./.	./.
chr10	40984201	.	CAGGGAGAGAG	C	3507.66	PASS	AB=0.966;AC=17;AF=0.304;AN=56;BaseQRankSum=1.599;DP=530;FS=79.969;HRun=0;HaplotypeScore=158.9551;InbreedingCoeff=0.0182;MQ=57.18;MQ0=17;MQRankSum=-5.012;QD=17.90;ReadPosRankSum=-2.425;VQSLOD=-0.5166;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:24:38.42:38,0,772	0/1:4,0:4:47.71:112,0,48	0/0:52,0:17:32.35:0,32,802	0/0:89,0:42:41.45:0,41,1053	0/0:21,0:20:18.67:0,19,302	1/1:5,5:10:2.82:410,3,0	0/0:9,0:9:16.44:0,16,223	0/1:11,17:27:99:900,0,244	0/0:18,0:18:54.18:0,54,2067	0/1:19,0:17:99:396,0,287	0/0:9,0:9:3.48:0,3,77	0/0:8,0:7:18.06:0,18,806	0/0:13,0:13:31.66:0,32,1469	0/1:11,0:10:3.50:3,0,305	1/1:12,0:11:8.98:201,9,0	0/0:11,0:11:25.02:0,25,359	0/0:22,0:22:21.03:0,21,799	0/1:4,0:4:12.01:163,0,12	0/1:19,0:19:99:289,0,352	0/1:13,0:13:88.31:137,0,88	0/0:8,16:24:18.52:0,19,341	0/0:20,0:19:23.87:0,24,445	0/0:11,0:11:24.08:0,24,1008	0/0:24,0:24:53.97:0,54,2216	0/1:19,0:19:58.89:274,0,59	0/1:14,0:13:89.81:90,0,374	0/1:9,0:9:32.57:143,0,33	1/1:8,0:8:18.06:351,18,0
chr10	40984204	.	GGA	G	2165.91	PASS	AB=0.704;AC=9;AF=0.161;AN=56;BaseQRankSum=3.504;DP=531;FS=7.243;HRun=0;HaplotypeScore=122.3984;InbreedingCoeff=-0.2207;MQ=61.35;MQ0=14;MQRankSum=-1.217;QD=13.05;ReadPosRankSum=1.470;VQSLOD=3.3573;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:5,22:25:37.11:581,0,37	0/0:4,0:4:9.02:0,9,97	0/0:51,0:18:29.45:0,29,455	0/0:95,0:46:26.85:0,27,732	0/1:7,15:21:31.03:180,0,31	0/1:9,1:10:34.07:59,0,34	0/0:8,1:9:14.84:0,15,207	0/1:26,0:25:64.12:64,0,245	0/0:18,0:18:54.18:0,54,918	0/1:18,0:17:37.79:38,0,313	0/0:8,0:8:3.01:0,3,52	0/0:9,0:9:18.06:0,18,311	0/0:14,0:14:33.58:0,34,560	0/1:3,8:10:25.56:255,0,26	0/0:13,0:12:8.50:0,8,66	0/1:3,8:11:15.77:254,0,16	0/1:5,17:22:82.67:580,0,83	0/0:3,0:3:0.05:0,0,23	0/0:20,0:20:10.94:0,11,498	0/0:13,0:13:11.60:0,12,115	0/0:24,0:24:18.06:0,18,294	0/1:4,15:18:24.91:292,0,25	0/0:10,0:10:24.08:0,24,401	0/0:23,1:24:14.23:0,14,826	0/0:19,0:19:13.98:0,14,121	0/0:13,0:12:26.67:0,27,339	0/0:9,0:9:15.04:0,15,169	0/0:8,0:8:17.82:0,18,161
chr10	40984211	.	G	GAGGGAGAC	7502.89	PASS	AB=0.926;AC=34;AF=0.607;AN=56;BaseQRankSum=-4.459;DP=556;FS=61.952;HRun=0;HaplotypeScore=167.6572;InbreedingCoeff=0.5726;MQ=70.21;MQ0=12;MQRankSum=-4.359;QD=24.13;ReadPosRankSum=-4.098;VQSLOD=1.8539;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:28:99:109,0,361	1/1:1,6:7:6.02:256,6,0	0/0:51,0:23:36.29:0,36,669	0/0:98,0:55:47.83:0,48,1098	0/1:20,0:19:0.23:0,0,126	1/1:13,0:13:26.81:560,27,0	1/1:10,0:10:8.99:88,9,0	1/1:23,0:22:53.96:993,54,0	0/0:19,0:19:51.18:0,51,1295	1/1:3,11:16:36.07:885,36,0	0/1:2,6:10:0:0,0,0	0/0:11,0:11:27:0,27,545	0/0:14,0:14:33.11:0,33,873	0/1:12,0:11:42.80:43,0,96	1/1:2,10:12:9.02:365,9,0	0/0:12,0:12:20.43:0,20,185	0/1:22,0:22:81.89:82,0,354	1/1:0,5:6:6.02:256,6,0	1/1:5,12:18:42.10:1215,42,0	1/1:2,10:14:8.99:275,9,0	1/1:23,0:23:17.92:219,18,0	0/1:19,0:19:13.40:13,0,222	0/0:11,0:11:27.02:0,27,637	0/0:25,0:25:53.09:0,53,1284	1/1:5,13:22:13.29:497,13,0	1/1:9,3:13:15.02:373,15,0	1/1:4,6:12:7.39:506,7,0	1/1:1,7:8:18.06:768,18,0
chr10	40985367	.	A	ATCATCATTG	29007.55	PASS	AB=0.636;AC=41;AF=0.732;AN=56;BaseQRankSum=-7.744;DP=697;FS=31.527;HRun=0;HaplotypeScore=148.5056;InbreedingCoeff=0.9174;MQ=57.40;MQ0=8;MQRankSum=-11.975;QD=59.20;ReadPosRankSum=-2.819;VQSLOD=2.7876;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:14,12:34:30.10:1211,30,0	1/1:1,5:8:6.02:256,6,0	0/0:43,0:30:57.11:0,57,1248	0/0:42,0:30:59.24:0,59,1372	1/1:6,10:18:14.94:416,15,0	1/1:12,9:22:30.10:1277,30,0	1/1:8,21:37:63.17:2549,63,0	1/1:20,6:40:99:3268,108,0	0/0:29,0:29:78.27:0,78,2248	1/1:7,19:29:72.23:2642,72,0	1/1:4,12:18:17.82:491,18,0	0/0:26,0:26:75.24:0,75,2130	0/0:17,0:17:51.13:0,51,1307	1/1:4,15:22:42.14:1866,42,0	1/1:5,13:21:36.12:1620,36,0	1/1:1,8:10:15.05:711,15,0	1/1:5,8:18:30.10:1242,30,0	1/1:4,11:23:24.08:1109,24,0	1/1:7,10:21:63.19:2163,63,0	1/1:3,23:27:32.79:902,33,0	1/1:14,11:29:27.09:883,27,0	1/1:3,11:15:20.90:567,21,0	0/0:19,0:19:48.13:0,48,1212	0/0:31,0:31:81.26:0,81,2264	1/1:6,16:22:27.09:1153,27,0	1/1:10,17:27:72.21:2269,72,0	1/1:3,16:22:45.15:1835,45,0	0/1:3,4:7:1.88:579,0,2
chr10	40985596	.	TCTCCTCTGACTC	T	1361.81	PASS	AB=0.958;AC=18;AF=0.321;AN=56;BaseQRankSum=0.943;DP=366;FS=2.384;HRun=0;HaplotypeScore=157.7209;InbreedingCoeff=-0.2069;MQ=65.21;MQ0=1;MQRankSum=-6.436;QD=7.28;ReadPosRankSum=-0.901;VQSLOD=2.2694;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:17,0:18:94.10:234,0,94	0/0:3,0:3:6:0,6,73	0/0:26,0:21:55.33:0,55,2518	0/0:27,0:23:63.01:0,63,2870	0/0:8,0:8:2.99:0,3,23	0/1:11,0:10:51.71:52,0,206	0/1:18,0:20:99:101,0,233	0/1:9,0:9:34.01:34,0,201	0/0:14,0:14:42.14:0,42,2382	0/0:8,0:8:16.08:0,16,217	0/1:11,0:11:46.70:47,0,66	0/0:18,0:18:51.18:0,51,2969	0/0:24,0:24:69.24:0,69,3991	0/1:8,0:8:41.63:42,0,193	0/1:14,0:13:40.90:41,0,228	0/1:6,1:8:29.95:147,0,30	0/1:9,1:10:53.51:93,0,54	0/0:12,0:11:21.05:0,21,308	0/1:11,0:10:35.58:36,0,148	1/1:8,0:8:5.89:68,6,0	0/1:11,0:11:6.08:6,0,32	0/1:8,0:8:13.78:95,0,14	0/0:15,0:15:42.14:0,42,2392	0/0:15,0:15:42.14:0,42,2216	0/1:13,1:14:27.87:252,0,28	0/1:18,1:18:99:170,0,700	0/0:9,0:9:15:0,15,207	1/1:6,0:6:6.02:107,6,0
chr10	40985601	.	T	TCCTCCTC	2436.14	PASS	AB=0.958;AC=34;AF=0.607;AN=56;BaseQRankSum=6.613;DP=378;FS=2.591;HRun=0;HaplotypeScore=131.4535;InbreedingCoeff=0.2981;MQ=64.53;MQ0=1;MQRankSum=-8.901;QD=10.97;ReadPosRankSum=-2.792;VQSLOD=2.0377;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:17:14.34:250,14,0	1/1:4,0:4:0.95:44,1,0	0/0:28,0:23:48.19:0,48,1358	0/0:27,0:23:66.22:0,66,1484	0/0:8,0:8:2.22:0,2,7	0/1:12,1:12:30.42:155,0,30	0/1:17,0:17:99:127,0,125	1/1:9,0:9:8.31:129,8,0	0/0:15,0:15:45.15:0,45,1161	0/1:7,0:7:35.24:46,0,35	1/1:11,1:12:6.02:117,6,0	0/0:19,0:19:57.19:0,57,1420	0/0:27,0:27:78.27:0,78,1966	1/1:8,1:9:4.99:182,5,0	1/1:13,0:12:12.65:169,13,0	0/1:8,0:8:40.17:60,0,40	1/1:11,0:11:6.34:52,6,0	1/1:10,0:10:1.89:89,2,0	1/1:12,0:11:6.40:134,6,0	1/1:10,0:10:6.02:86,6,0	1/1:11,0:11:1.89:32,2,0	1/1:7,0:7:2.44:100,2,0	0/0:15,0:15:42.14:0,42,1062	0/0:17,0:17:47.70:0,48,1171	1/1:17,0:17:2.82:181,3,0	0/1:14,1:17:50.84:470,0,51	0/1:9,0:9:72.82:86,0,73	1/1:6,0:6:6.02:107,6,0
chr10	40985602	.	CTGA	C	5785.87	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=10.573;DP=367;FS=11.924;HRun=0;HaplotypeScore=83.0963;InbreedingCoeff=0.8686;MQ=67.24;MQ0=1;MQRankSum=-12.832;QD=27.16;ReadPosRankSum=-0.605;VQSLOD=4.1683;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,15:16:26.44:400,26,0	1/1:0,4:4:9.03:159,9,0	0/0:30,0:25:54.16:0,54,1600	0/0:28,0:24:68.69:0,69,1493	1/1:1,6:7:3.01:48,3,0	1/1:1,12:12:21.36:303,21,0	1/1:2,14:16:36.01:501,36,0	1/1:0,7:7:21.07:364,21,0	0/0:16,0:16:48.16:0,48,1172	1/1:0,7:7:18.06:311,18,0	1/1:1,10:11:5.99:74,6,0	0/0:20,0:20:60.21:0,60,1464	0/0:26,0:26:78.27:0,78,1907	1/1:2,6:8:9.39:122,9,0	1/1:1,12:12:24.01:346,24,0	1/1:2,6:8:18.93:289,19,0	1/1:1,6:7:12.04:211,12,0	1/1:2,8:9:21.05:326,21,0	1/1:0,10:9:24.08:439,24,0	1/1:0,9:9:6.02:106,6,0	1/1:0,11:11:9.01:128,9,0	1/1:0,7:7:12.04:210,12,0	0/0:15,0:15:45.15:0,45,1077	0/0:19,0:19:54.19:0,54,1298	1/1:2,15:17:27.04:433,27,0	1/1:7,11:17:47.84:680,48,0	1/1:2,7:9:15.04:230,15,0	1/1:0,4:4:6.02:107,6,0
chr10	40987348	.	ACATG	A	2025.12	PASS	AB=0.952;AC=19;AF=0.339;AN=56;BaseQRankSum=10.294;DP=900;FS=0.000;HRun=0;HaplotypeScore=218.8129;InbreedingCoeff=0.1275;MQ=48.13;MQ0=4;MQRankSum=-6.043;QD=4.17;ReadPosRankSum=7.428;VQSLOD=1.1290;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:17,34:51:16.92:304,17,0	0/1:11,0:11:10.44:10,0,43	0/0:10,0:2:2.60:0,3,10	0/0:15,0:4:5.72:0,6,33	1/1:9,33:42:15.63:302,16,0	0/0:8,0:8:2.99:0,3,24	0/0:26,0:26:9.46:0,9,77	0/1:26,0:26:99:112,0,247	0/0:64,0:64:99:0,156,3762	0/1:27,0:27:76.08:125,0,76	0/0:10,0:10:2.98:0,3,22	0/0:46,0:46:99:0,120,2902	0/0:46,0:46:99:0,114,2437	1/1:37,37:74:1.12:22,1,0	0/0:31,0:31:10.55:0,11,97	0/1:15,48:63:54.40:303,0,54	1/1:11,27:38:5.96:102,6,0	0/1:9,0:9:5.01:5,0,75	0/1:22,0:20:19.69:20,0,275	0/0:12,0:12:3:0,3,25	0/0:69,0:62:8.91:0,9,85	1/1:13,63:76:40.39:711,40,0	0/0:22,0:22:54.17:0,54,1304	0/0:41,0:41:77.29:0,77,2153	0/0:13,0:13:14.98:0,15,124	0/1:18,0:18:33.04:101,0,33	0/1:14,0:15:33.70:47,0,34	0/1:14,0:14:31.14:31,0,58
chr10	40987367	.	TGTAA	T	4857.26	PASS	AB=0.916;AC=35;AF=0.673;AN=52;BaseQRankSum=13.278;DP=750;FS=4.165;HRun=0;HaplotypeScore=178.1661;InbreedingCoeff=0.5279;MQ=47.60;MQ0=1;MQRankSum=-4.478;QD=9.23;ReadPosRankSum=0.437;VQSLOD=4.3228;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:45,0:45:19.30:331,19,0	1/1:3,4:7:3.90:60,4,0	0/1:18,0:12:5.91:6,0,328	0/1:20,0:9:9.21:9,0,193	1/1:43,0:43:23.52:352,24,0	0/0:5,1:6:0:0,0,0	0/1:9,7:16:0.19:0,0,0	1/1:5,9:14:27.09:521,27,0	0/0:62,0:62:99:0,178,4161	1/1:10,4:14:42.14:723,42,0	./.	0/0:47,0:47:99:0,138,3416	0/0:36,0:36:99:0,102,2465	1/1:60,0:60:4.78:47,5,0	1/1:14,5:19:2.92:38,3,0	0/1:63,0:63:60.70:302,0,61	1/1:38,0:38:5.59:100,6,0	1/1:0,1:1:3.01:58,3,0	1/1:6,3:9:15.05:270,15,0	./.	0/1:39,6:39:0.59:1,0,1	1/1:69,1:70:46.89:759,47,0	0/0:23,0:23:69.24:0,69,1665	0/0:34,0:34:90.74:0,91,2222	1/1:7,1:8:3:25,3,0	1/1:11,5:16:38.59:647,39,0	1/1:7,3:10:18.06:285,18,0	1/1:9,1:10:21.07:323,21,0
chr10	40987369	.	TAA	T	1215.44	PASS	AB=0.902;AC=27;AF=0.519;AN=52;BaseQRankSum=13.415;DP=714;FS=0.445;HRun=2;HaplotypeScore=167.7843;InbreedingCoeff=0.4010;MQ=48.10;MQ0=1;MQRankSum=-5.513;QD=3.25;ReadPosRankSum=2.103;VQSLOD=-0.5708;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:41,1:42:44.91:45,0,55	1/1:4,3:7:3.83:21,4,0	0/1:17,2:12:30.25:30,0,432	0/0:19,0:9:9.85:0,10,273	0/1:40,1:41:46.29:46,0,102	0/0:1,5:6:0:0,0,0	0/1:8,6:14:0:1,0,0	1/1:9,0:9:26.58:167,27,0	0/0:62,0:62:99:0,178,3383	1/1:4,10:14:41.45:288,41,0	./.	0/0:47,0:47:99:0,141,2770	0/0:36,0:36:99:0,105,2053	0/0:55,2:57:15:0,15,128	1/1:6,8:14:2.76:15,3,0	0/1:61,1:62:34.37:34,0,160	0/0:38,0:38:15.55:0,16,333	1/1:1,0:1:2.94:18,3,0	1/1:3,3:6:14.83:99,15,0	./.	0/1:30,11:36:0.11:1,0,0	0/1:64,1:65:40.88:131,0,41	0/0:25,0:25:75.26:0,75,1480	0/0:34,0:34:96.76:0,97,1867	1/1:2,5:7:3:25,3,0	1/1:6,8:14:5.21:240,5,0	1/1:3,7:10:17.15:112,17,0	1/1:1,7:8:20.29:115,20,0
chr10	40987376	.	G	GCA	835.88	PASS	AB=0.743;AC=20;AF=0.385;AN=52;BaseQRankSum=10.594;DP=745;FS=2.698;HRun=0;HaplotypeScore=199.2483;InbreedingCoeff=0.6920;MQ=47.43;MQ0=3;MQRankSum=-10.201;QD=4.86;ReadPosRankSum=-1.103;VQSLOD=2.7119;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:32.63:0,33,500	1/1:7,3:10:2.36:10,2,0	0/0:28,0:14:15.53:0,16,478	0/0:20,0:9:18.48:0,18,232	0/0:39,0:39:39.13:0,39,620	0/1:3,4:8:0.11:0,0,0	0/1:17,4:21:0.23:0,0,1	1/1:9,0:9:22.82:84,23,0	0/0:58,0:58:99:0,171,2688	1/1:8,9:17:29.07:298,29,0	./.	0/0:46,0:46:99:0,138,2242	0/0:34,0:34:96.33:0,96,1556	0/0:57,0:57:17.97:0,18,291	1/1:12,6:19:2.10:26,2,0	0/0:61,0:61:39.34:0,39,591	0/0:34,0:34:47.50:0,48,726	1/1:3,0:3:2.02:9,2,0	1/1:3,3:6:14.20:116,14,0	./.	0/1:29,8:32:0:1,0,0	0/0:61,0:61:66.38:0,66,978	0/0:24,0:24:72.25:0,72,1173	0/0:32,0:32:89.98:0,90,1459	0/0:10,5:15:0.47:0,0,2	0/1:10,7:17:25.12:203,0,25	1/1:7,6:13:7.36:72,7,0	1/1:4,7:11:21.46:183,21,0
chr10	40987380	.	A	ACG	43.61	PASS	AB=0.959;AC=9;AF=0.173;AN=52;BaseQRankSum=8.702;DP=715;FS=9.410;HRun=0;HaplotypeScore=199.0114;InbreedingCoeff=0.2021;MQ=47.67;MQ0=3;MQRankSum=-7.437;QD=0.30;ReadPosRankSum=-0.756;VQSLOD=2.0128;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:32.64:0,33,537	0/0:8,0:8:2.94:0,3,18	0/0:30,0:15:18.33:0,18,504	0/0:21,0:9:18.49:0,18,244	0/0:36,0:36:39.13:0,39,636	0/1:8,0:8:0.09:0,0,0	0/1:19,1:20:0.32:1,0,0	0/0:9,0:9:14.87:0,15,84	0/0:52,0:52:99:0,157,2533	0/1:17,0:17:49.22:49,0,67	./.	0/0:46,0:46:99:0,138,2147	0/0:33,0:33:96.28:0,96,1496	0/0:56,0:56:24:0,24,365	0/1:18,1:19:0.28:0,0,1	0/0:59,0:59:38.96:0,39,603	0/0:28,0:28:34.04:0,34,738	0/0:3,0:3:3.37:0,3,17	0/1:6,0:6:12.41:22,0,12	./.	0/1:22,13:29:0.66:1,0,1	0/0:58,0:58:66.22:0,66,1070	0/0:24,0:24:69.24:0,69,1123	0/0:31,0:31:87.29:0,87,1419	0/0:15,0:15:0.47:0,0,2	0/1:17,0:17:29.20:29,0,43	0/1:13,0:13:7.17:7,0,24	0/1:11,0:11:1.66:43,0,2
chr10	40987381	.	TAC	T	1587.63	PASS	AB=0.715;AC=22;AF=0.423;AN=52;BaseQRankSum=11.560;DP=687;FS=0.000;HRun=0;HaplotypeScore=181.8437;InbreedingCoeff=0.7933;MQ=47.99;MQ0=3;MQRankSum=-10.274;QD=9.86;ReadPosRankSum=-3.347;VQSLOD=2.8495;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:33.74:0,34,656	1/1:5,3:8:3.88:26,4,0	0/0:29,0:15:37.36:0,37,667	0/0:21,0:9:12.37:0,12,266	0/0:36,0:36:39.13:0,39,775	0/1:2,4:6:0.13:0,0,0	0/1:11,4:15:0.19:1,0,0	1/1:3,0:3:8.87:58,9,0	0/0:52,0:52:99:0,157,3043	1/1:8,9:17:35.29:529,35,0	./.	0/0:44,0:44:99:0,129,2469	0/0:31,0:31:90.23:0,90,1642	0/0:56,0:58:24.04:0,24,488	0/1:11,7:18:0.49:0,0,1	0/0:57,0:57:44.38:0,44,766	0/0:28,0:28:38.92:0,39,865	1/1:3,0:3:5.74:31,6,0	1/1:1,3:4:11.97:161,12,0	./.	1/1:25,9:28:2.09:9,2,0	0/0:55,0:55:66.23:0,66,1311	0/0:24,0:24:72.23:0,72,1369	0/0:32,0:32:87.30:0,87,1746	0/1:10,5:15:0.17:1,0,0	1/1:8,7:16:39.27:493,39,0	1/1:5,6:12:11.99:165,12,0	1/1:3,7:10:18.06:290,18,0
chr10	40987383	.	CGT	C	302.60	PASS	AB=0.971;AC=16;AF=0.308;AN=52;BaseQRankSum=10.576;DP=679;FS=1.292;HRun=0;HaplotypeScore=184.0003;InbreedingCoeff=0.5103;MQ=48.10;MQ0=2;MQRankSum=-9.222;QD=1.75;ReadPosRankSum=-2.877;VQSLOD=2.0095;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,8:43:36.65:0,37,594	0/0:8,0:8:2.86:0,3,15	0/0:28,0:15:12.99:0,13,465	0/0:21,0:9:10.96:0,11,240	0/0:29,6:35:39.13:0,39,669	0/0:7,0:7:0:0,0,0	0/1:15,0:15:0.06:0,0,1	0/0:3,0:3:2.94:0,3,18	0/0:51,0:51:99:0,141,2400	0/1:17,0:17:7.02:101,0,7	./.	0/0:41,0:41:99:0,105,1787	0/0:31,0:31:75.26:0,75,1294	0/0:36,21:57:23.95:0,24,416	0/1:18,0:18:0.18:0,0,0	0/0:37,18:55:34.32:0,34,731	0/1:23,6:29:25.01:25,0,710	1/1:3,0:3:2.80:13,3,0	0/1:4,0:4:10.15:10,0,10	./.	1/1:34,0:28:2.90:17,3,0	0/0:45,8:53:66.21:0,66,1111	0/0:23,0:23:66.23:0,66,1142	0/0:32,0:32:84.29:0,84,1454	0/1:15,0:15:0.17:1,0,0	1/1:15,1:16:32.27:170,32,0	1/1:12,0:12:10.95:51,11,0	1/1:10,0:10:15.77:65,16,0
chr10	40987388	.	GTGTGCA	G	792.47	PASS	AB=0.783;AC=15;AF=0.288;AN=52;BaseQRankSum=6.243;DP=674;FS=5.825;HRun=0;HaplotypeScore=210.1250;InbreedingCoeff=0.2254;MQ=47.17;MQ0=2;MQRankSum=-5.712;QD=4.55;ReadPosRankSum=-1.556;VQSLOD=1.8082;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:36.23:0,36,1305	0/0:5,3:8:2.39:0,2,15	0/0:30,0:15:44.90:0,45,1091	0/0:26,0:8:9.45:0,9,417	0/0:37,0:37:48.15:0,48,1530	1/1:5,2:7:2.28:36,2,0	0/1:6,9:15:0.56:1,0,1	0/0:3,0:3:5.49:0,5,25	0/0:52,0:52:99:0,154,5395	0/1:13,4:17:99:299,0,301	./.	0/0:40,0:40:99:0,114,3955	0/0:31,0:31:83.87:0,84,2916	0/0:57,0:57:26.38:0,26,945	0/1:11,6:17:0.23:1,0,0	0/0:50,0:50:24.51:0,25,1417	0/1:29,0:29:54.52:55,0,1635	1/1:1,2:3:3.01:68,3,0	0/0:4,0:4:11.97:0,12,99	./.	1/1:27,7:28:2.60:68,3,0	0/0:50,0:50:69.24:0,69,2327	0/0:22,0:22:66.23:0,66,2371	0/0:31,0:31:84.29:0,84,3045	1/1:6,9:15:0.47:2,0,0	0/1:11,4:15:99:260,0,287	0/1:8,4:12:25.97:106,0,26	0/1:7,3:10:30.91:31,0,148
chr10	40987392	.	GCA	G	126.42	PASS	AB=1.000;AC=14;AF=0.280;AN=50;BaseQRankSum=5.623;DP=641;FS=7.793;HRun=0;HaplotypeScore=178.2326;InbreedingCoeff=0.3136;MQ=48.98;MQ0=2;MQRankSum=-5.274;QD=0.93;ReadPosRankSum=-1.846;VQSLOD=1.9422;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:36.75:0,37,731	0/1:7,0:7:0:0,0,0	0/0:29,0:15:30.96:0,31,602	0/0:29,0:10:22.08:0,22,296	0/0:35,0:35:45.14:0,45,835	1/1:7,0:7:2.19:35,2,0	0/1:14,0:14:0.15:0,0,0	./.	0/0:50,0:50:99:0,151,3019	0/1:14,0:14:44.62:45,0,107	./.	0/0:37,0:37:99:0,111,2191	0/0:31,0:31:86.88:0,87,1671	0/0:49,5:54:24.94:0,25,534	0/1:14,0:14:0.38:0,0,1	0/0:47,0:47:39.78:0,40,810	0/0:28,0:28:28.30:0,28,922	1/1:2,0:2:2.84:14,3,0	0/0:3,0:3:7.84:0,8,31	./.	1/1:30,0:24:2.60:45,3,0	0/0:48,0:48:69.09:0,69,1293	0/0:22,0:22:66.21:0,66,1304	0/0:32,0:32:84.29:0,84,1707	0/1:14,0:14:0.17:1,0,0	0/1:13,0:13:55.29:55,0,139	0/1:11,0:11:22.99:39,0,23	0/1:10,0:10:17.93:18,0,115
chr10	40987394	.	ATACGTGTG	A	807.68	PASS	AB=0.991;AC=19;AF=0.352;AN=54;BaseQRankSum=7.068;DP=633;FS=4.859;HRun=0;HaplotypeScore=214.0526;InbreedingCoeff=0.4144;MQ=49.08;MQ0=2;MQRankSum=-4.700;QD=4.90;ReadPosRankSum=-4.684;VQSLOD=1.2781;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:34.99:0,35,1346	0/1:6,0:6:0:0,0,0	0/0:27,0:13:25.56:0,26,755	0/0:27,0:10:16.15:0,16,324	0/0:35,0:35:42.14:0,42,1587	1/1:6,0:6:1.83:24,2,0	0/1:12,0:12:0.45:0,0,1	1/1:0,5:5:15.05:240,15,0	0/0:51,0:51:99:0,153,5858	0/1:14,0:14:40.72:234,0,41	./.	0/0:37,0:37:99:0,111,4552	0/0:31,0:31:87.30:0,87,3551	0/0:54,0:54:29.47:0,29,1259	0/1:14,0:14:0.39:1,0,0	0/0:47,0:47:21.28:0,21,1441	0/1:28,0:28:8.77:9,0,1852	1/1:2,0:2:3.01:54,3,0	0/1:3,0:3:0:0,0,0	0/1:10,1:11:0:0,0,0	1/1:30,0:24:3.01:49,3,0	0/0:48,0:48:63.20:0,63,2294	0/0:22,0:22:66.23:0,66,2787	0/0:32,0:32:84.25:0,84,3518	0/0:14,0:14:0.47:0,0,1	0/1:13,0:13:81.44:182,0,81	1/1:11,0:11:11.85:105,12,0	0/1:10,0:10:44.12:56,0,44
chr10	40987402	.	G	GTACATGCA	5008.79	PASS	AB=0.917;AC=24;AF=0.429;AN=56;BaseQRankSum=3.644;DP=658;FS=7.917;HRun=0;HaplotypeScore=225.2307;InbreedingCoeff=0.6653;MQ=46.30;MQ0=2;MQRankSum=-8.035;QD=25.30;ReadPosRankSum=-7.222;VQSLOD=1.5395;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:32.70:0,33,713	0/1:7,0:7:0:0,0,0	0/0:25,0:11:14.13:0,14,259	0/0:22,0:6:9.83:0,10,99	0/0:32,0:32:36.10:0,36,927	1/1:10,0:10:6.19:153,6,0	1/1:22,0:22:4.20:158,4,0	1/1:10,0:10:30.10:727,30,0	0/0:47,0:47:99:0,132,3021	1/1:20,0:21:9.97:1623,10,0	0/1:5,4:10:0.07:0,0,0	0/0:35,0:35:99:0,105,2603	0/0:32,0:32:86.95:0,87,2206	0/0:51,0:52:28.90:0,29,875	1/1:12,1:13:5.15:38,5,0	0/0:42,0:42:36.70:0,37,848	0/0:28,0:28:51.03:0,51,1308	1/1:6,0:6:9.03:261,9,0	1/1:4,0:4:11.95:158,12,0	1/1:13,0:13:2.61:50,3,0	1/1:31,12:37:22.61:530,23,0	0/0:46,0:46:54.09:0,54,1139	0/0:22,0:22:63.16:0,63,1587	0/0:30,0:30:78.21:0,78,1969	0/0:12,0:12:0.47:0,0,1	0/1:16,0:15:83.27:781,0,83	1/1:11,0:11:9.50:224,10,0	0/1:12,0:12:18.57:306,0,19
chr10	40987446	.	C	CTGTG	5230.76	PASS	AB=1.000;AC=38;AF=0.731;AN=52;BaseQRankSum=-2.174;DP=769;FS=0.670;HRun=0;HaplotypeScore=219.4342;InbreedingCoeff=0.5810;MQ=45.12;MQ0=13;MQRankSum=-0.595;QD=9.10;ReadPosRankSum=-3.934;VQSLOD=3.5480;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:41,0:36:17.33:185,17,0	0/0:5,0:13:9.95:0,10,85	./.	./.	1/1:26,0:26:9:96,9,0	0/0:6,0:18:0.68:0,1,2	0/0:23,0:32:8.39:0,8,62	1/1:29,0:27:2.96:19,3,0	0/0:32,0:33:7.69:0,8,382	1/1:40,1:42:44.30:558,44,0	1/1:11,1:12:2.74:13,3,0	0/1:26,0:28:20.66:21,0,435	0/0:31,0:31:35.94:0,36,541	1/1:34,0:33:2.21:45,2,0	1/1:16,9:28:23.48:450,23,0	1/1:27,0:28:6.69:99,7,0	1/1:31,0:30:3.01:46,3,0	1/1:11,9:19:18.06:400,18,0	1/1:22,0:19:7.78:72,8,0	1/1:17,4:22:23.80:401,24,0	1/1:63,8:66:38.07:741,38,0	1/1:32,0:33:4.79:56,5,0	0/1:15,0:15:2.79:3,0,218	0/0:30,0:30:33.09:0,33,494	1/1:17,3:21:11.15:173,11,0	1/1:18,12:38:44.52:1053,45,0	1/1:17,3:20:18.27:320,18,0	1/1:6,6:12:21.07:480,21,0
chr10	40988305	.	G	GGTAT	7013.87	PASS	AB=0.739;AC=24;AF=0.444;AN=54;BaseQRankSum=-8.066;DP=783;FS=0.000;HRun=0;HaplotypeScore=148.9428;InbreedingCoeff=0.6495;MQ=72.87;MQ0=3;MQRankSum=-0.755;QD=17.94;ReadPosRankSum=-3.376;VQSLOD=4.0952;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:30:15.05:260,15,0	1/1:7,0:12:12.04:208,12,0	1/1:33,0:31:1.25:3,1,0	./.	0/0:26,0:26:39.08:0,39,537	0/0:15,0:28:33.04:0,33,307	0/0:17,0:25:17.97:0,18,158	1/1:39,0:39:33.02:507,33,0	0/0:28,0:28:42.14:0,42,648	0/1:25,13:39:25.34:915,0,25	1/1:8,12:21:33.11:777,33,0	0/0:10,0:18:21.02:0,21,196	0/0:25,0:25:48.16:0,48,746	0/0:25,0:26:39.11:0,39,545	1/1:10,12:23:30.10:706,30,0	0/0:23,0:23:36.09:0,36,512	0/0:31,0:33:54.15:0,54,772	1/1:13,14:28:33.11:777,33,0	0/1:18,8:25:22.53:463,0,23	0/1:19,9:32:63.11:527,0,63	1/1:15,10:26:27.09:636,27,0	1/1:21,0:37:20.77:364,21,0	0/0:14,0:26:25.80:0,26,227	0/0:19,0:42:50.82:0,51,462	0/0:24,0:24:30.08:0,30,425	0/0:39,0:39:12.36:0,12,866	0/1:21,9:32:10.48:729,0,10	1/1:9,2:11:6.02:141,6,0
chr10	40990278	.	TC	T	2063.18	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=6.145;DP=579;FS=0.921;HRun=8;HaplotypeScore=62.7733;InbreedingCoeff=0.9681;MQ=75.41;MQ0=3;MQRankSum=-0.987;QD=21.95;ReadPosRankSum=2.850;VQSLOD=4.0259;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:62.46:0,62,506	0/0:7,0:7:18.01:0,18,173	0/0:30,0:18:6.40:0,6,211	0/0:20,0:13:23.01:0,23,158	1/1:2,34:36:97.27:902,97,0	0/0:25,0:25:72.10:0,72,774	0/0:19,0:19:44.92:0,45,377	0/0:28,0:28:56.97:0,57,590	0/0:18,0:18:48.11:0,48,545	0/0:22,0:22:60.17:0,60,705	0/0:27,0:27:78.20:0,78,916	0/0:15,0:15:45.09:0,45,495	0/0:9,0:9:24.06:0,24,279	1/1:3,11:14:30.04:286,30,0	0/0:10,0:10:24.06:0,24,278	1/1:2,17:19:42.07:405,42,0	1/1:3,22:25:61.24:630,61,0	0/0:8,0:8:21.06:0,21,254	0/0:19,0:19:51.01:0,51,575	0/0:20,0:20:51.11:0,51,571	0/0:24,0:24:60.11:0,60,656	0/0:19,0:19:53.82:0,54,430	0/0:22,0:22:54.14:0,54,628	0/0:24,0:24:60.14:0,60,698	0/0:22,0:22:60.09:0,60,657	0/0:23,1:24:43.35:0,43,689	0/0:21,0:21:60.14:0,60,688	0/0:18,0:18:48.13:0,48,568
chr10	40990286	.	C	CA	1162.35	PASS	AB=0.762;AC=7;AF=0.125;AN=56;BaseQRankSum=-5.523;DP=587;FS=2.575;HRun=9;HaplotypeScore=70.2377;InbreedingCoeff=0.5205;MQ=73.91;MQ0=3;MQRankSum=-0.900;QD=10.57;ReadPosRankSum=0.229;VQSLOD=2.6600;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:7,25:34:13.30:406,0,13	0/1:5,1:6:18.19:18,0,82	0/0:32,0:20:19.84:0,20,209	0/0:19,0:10:12.68:0,13,85	0/0:39,0:39:91.04:0,91,507	0/1:23,4:27:9.36:9,0,381	1/1:3,16:19:36.10:398,36,0	0/0:18,0:18:18.27:0,18,286	0/0:17,0:17:44.61:0,45,366	0/0:22,0:22:62.91:0,63,531	0/0:29,1:30:56.86:0,57,700	0/0:16,0:16:41.94:0,42,352	0/0:9,0:9:20.99:0,21,182	0/0:13,0:13:31.38:0,31,170	0/0:10,0:10:23.97:0,24,205	0/0:19,0:19:46.22:0,46,261	0/0:27,0:27:69.76:0,70,375	0/0:11,0:11:26.87:0,27,220	0/0:19,1:20:16.09:0,16,370	0/0:18,0:18:44.65:0,45,371	0/0:22,0:22:47.94:0,48,409	1/1:3,20:24:47.84:471,48,0	0/0:23,0:23:52.47:0,52,441	0/0:20,0:20:53.99:0,54,468	0/0:26,0:26:62.82:0,63,514	0/0:26,0:26:59.89:0,60,506	0/0:23,0:23:59.90:0,60,504	0/0:17,0:17:47.96:0,48,408
chr10	40990853	.	C	CTG	16416.14	PASS	AB=0.593;AC=29;AF=0.518;AN=56;BaseQRankSum=-18.918;DP=993;FS=2.192;HRun=0;HaplotypeScore=133.8662;InbreedingCoeff=0.7709;MQ=69.53;MQ0=4;MQRankSum=0.250;QD=31.15;ReadPosRankSum=0.651;VQSLOD=6.8182;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,39:55:62.64:1585,63,0	0/0:18,0:20:47.81:0,48,548	0/0:49,0:42:53.06:0,53,649	0/0:55,0:49:89.24:0,89,1104	0/0:33,0:33:78.22:0,78,941	1/1:4,16:20:44.18:694,44,0	1/1:3,24:28:26.04:947,26,0	0/1:12,18:30:82.44:750,0,82	0/0:49,0:49:99:0,117,1448	1/1:12,27:39:18.95:1335,19,0	0/1:4,17:21:57.39:684,0,57	0/0:36,0:37:99:0,102,1203	0/0:35,0:35:72.20:0,72,878	0/0:48,0:48:99:0,135,1648	1/1:10,35:47:55.61:1398,56,0	0/0:40,0:40:99:0,99,1202	0/0:41,0:41:94.95:0,95,1185	0/1:8,15:24:26.23:640,0,26	1/1:12,19:31:7.15:902,7,0	1/1:5,24:29:20:848,20,0	1/1:18,52:69:55.06:1943,55,0	1/1:5,22:27:63.22:1033,63,0	0/0:22,0:23:60.02:0,60,720	0/0:36,0:35:93.27:0,93,1139	1/1:5,18:24:51.09:804,51,0	1/1:7,28:35:29.48:1268,29,0	1/1:6,22:28:16.99:799,17,0	1/1:1,16:18:48.16:786,48,0
chr10	40990984	.	AGT	A	3604.69	PASS	AB=0.958;AC=9;AF=0.161;AN=56;BaseQRankSum=11.526;DP=975;FS=11.525;HRun=0;HaplotypeScore=122.6850;InbreedingCoeff=0.8592;MQ=63.22;MQ0=7;MQRankSum=-0.727;QD=21.85;ReadPosRankSum=4.482;VQSLOD=3.6848;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:45:69.08:0,69,1568	0/0:2,0:7:14.99:0,15,130	0/0:45,0:34:59.56:0,60,910	0/0:52,0:33:57.18:0,57,848	1/1:2,26:27:60.19:744,60,0	0/0:29,0:29:72.23:0,72,1140	0/0:29,0:29:73.05:0,73,1096	0/0:43,0:43:93.30:0,93,1478	0/0:43,0:43:99:0,108,1714	0/0:44,1:45:80.19:0,80,1815	0/0:28,1:30:41.05:0,41,1145	0/0:29,0:29:72.25:0,72,1164	0/0:23,0:23:63.21:0,63,1004	1/1:8,32:40:78.24:967,78,0	0/0:44,0:43:99:0,117,1860	1/1:7,34:41:41.08:1029,41,0	1/1:10,22:32:70.95:860,71,0	0/0:27,0:27:63.18:0,63,1000	0/1:22,1:23:4.72:5,0,454	0/0:26,2:29:3.86:0,4,1054	0/0:74,0:74:99:0,178,2786	0/0:26,0:26:60.18:0,60,926	0/0:27,1:28:35.04:0,35,1065	0/0:48,0:48:99:0,105,1675	0/0:28,0:28:75.23:0,75,1198	0/0:39,1:40:61.73:0,62,1467	0/0:24,0:24:66.23:0,66,1075	0/0:19,0:19:48.14:0,48,751
chr10	40992342	.	A	AAGAG	2710.30	PASS	AB=0.948;AC=44;AF=0.815;AN=54;BaseQRankSum=2.071;DP=719;FS=31.359;HRun=0;HaplotypeScore=149.5273;InbreedingCoeff=0.2450;MQ=68.52;MQ0=16;MQRankSum=-2.362;QD=4.56;ReadPosRankSum=-3.400;VQSLOD=0.4215;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:25:15.01:164,15,0	1/1:7,0:7:11.96:127,12,0	0/1:46,0:29:0:0,0,0	./.	0/1:22,0:23:80.08:80,0,145	1/1:17,0:17:8.52:92,9,0	0/1:26,0:33:0.29:126,0,0	1/1:38,0:38:20.67:210,21,0	1/1:12,19:31:11.78:223,12,0	1/1:31,0:31:39.03:308,39,0	1/1:17,0:17:8.13:76,8,0	0/1:15,0:19:30.82:31,0,150	1/1:24,0:32:13.71:89,14,0	0/1:21,0:22:39.38:39,0,167	1/1:17,0:17:2.94:19,3,0	0/1:19,0:19:29.50:30,0,84	0/0:35,0:37:30.23:0,30,404	1/1:12,0:12:7.45:68,7,0	1/1:18,0:18:6.48:77,6,0	1/1:25,0:25:16.55:168,17,0	1/1:28,0:28:22.23:216,22,0	1/1:24,0:24:16.97:135,17,0	1/1:11,0:15:5.87:36,6,0	0/0:20,0:21:19.86:0,20,265	1/1:20,0:20:8.50:62,8,0	1/1:23,9:33:36.10:306,36,0	1/1:16,0:23:6.02:104,6,0	1/1:8,8:16:4.84:75,5,0
chr10	40993000	.	T	TAGAGAG	776.29	PASS	AB=0.948;AC=17;AF=0.354;AN=48;BaseQRankSum=-0.958;DP=420;FS=21.305;HRun=0;HaplotypeScore=100.7404;InbreedingCoeff=0.4606;MQ=58.54;MQ0=8;MQRankSum=-1.411;QD=4.39;ReadPosRankSum=-2.408;VQSLOD=-0.1283;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:22,3:27:0.26:0,0,0	0/0:4,0:4:2.91:0,3,59	./.	./.	0/0:22,0:22:9.03:0,9,151	0/1:15,0:15:15.26:15,0,55	1/1:19,0:18:0.52:34,1,0	1/1:22,0:21:1.55:4,2,0	0/0:12,0:12:9.03:0,9,178	1/1:24,0:23:29.41:330,29,0	1/1:14,0:13:6.02:117,6,0	1/1:14,0:14:14.99:142,15,0	0/0:19,0:19:9.03:0,9,173	0/1:11,0:11:1.16:1,0,104	0/0:15,0:14:6.02:0,6,117	0/0:10,0:10:9.03:0,9,168	1/1:24,0:23:21:257,21,0	1/1:7,0:6:2.98:22,3,0	0/0:17,0:17:6.02:0,6,106	0/0:12,0:12:2.68:0,3,53	0/0:13,0:12:3.01:0,3,50	./.	0/0:8,0:7:3.01:0,3,55	0/0:16,0:16:11.49:0,11,153	0/0:14,0:14:12.04:0,12,194	0/0:11,0:11:3.01:0,3,46	0/0:16,0:17:10.86:0,11,180	./.
chr10	40993965	.	A	AG	8511.34	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=13.658;DP=651;FS=2.145;HRun=4;HaplotypeScore=107.9589;InbreedingCoeff=0.9982;MQ=80.11;MQ0=0;MQRankSum=-2.322;QD=20.76;ReadPosRankSum=-0.559;VQSLOD=3.6938;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:44,0:44:99:922,117,0	0/0:8,0:8:24.07:0,24,272	0/0:17,0:17:45.13:0,45,507	0/0:14,0:14:18:0,18,215	0/0:11,0:11:30.09:0,30,340	1/1:25,0:25:65.79:519,66,0	1/1:17,0:17:47.82:371,48,0	1/1:28,0:28:74.21:504,74,0	0/0:26,0:26:72.20:0,72,817	1/1:30,0:30:80.07:541,80,0	1/1:24,0:24:68.74:528,69,0	0/0:19,0:19:54.14:0,54,603	0/0:22,0:22:57.16:0,57,647	0/0:24,0:24:69.16:0,69,762	1/1:30,0:30:83.70:647,84,0	0/0:20,0:20:54.12:0,54,594	0/0:28,0:28:84.21:0,84,940	1/1:9,0:9:23.90:183,24,0	1/1:18,0:18:47.59:335,48,0	1/1:37,0:37:98.65:763,99,0	1/1:36,0:36:98.66:772,99,0	1/1:24,0:24:68.70:524,69,0	0/0:31,0:31:90.25:0,90,1013	0/0:21,0:21:57.16:0,57,646	1/1:15,1:16:47.83:384,48,0	1/1:24,2:26:71.42:537,71,0	1/1:33,1:34:86.75:702,87,0	1/1:12,0:12:35.89:281,36,0
chr10	40993966	.	G	GT	18085.58	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=-6.912;DP=649;FS=1.682;HRun=0;HaplotypeScore=74.0812;InbreedingCoeff=0.9992;MQ=80.21;MQ0=0;MQRankSum=-1.526;QD=44.44;ReadPosRankSum=0.439;VQSLOD=5.1752;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,43:43:99:1869,117,0	0/0:9,0:9:24.08:0,24,336	0/0:17,0:17:51.14:0,51,676	0/0:14,0:14:27.04:0,27,362	0/0:11,0:11:30.10:0,30,417	1/1:1,24:25:66.23:1054,66,0	1/1:0,17:17:48.16:767,48,0	1/1:1,27:28:81.25:1243,81,0	0/0:26,0:26:78.24:0,78,1059	1/1:0,30:30:90.27:1371,90,0	1/1:0,25:25:69.24:1103,69,0	0/0:19,0:19:57.18:0,57,781	0/0:21,0:21:63.19:0,63,849	0/0:24,0:24:72.23:0,72,988	1/1:0,30:30:87.23:1360,87,0	0/0:20,0:20:60.17:0,60,804	0/0:30,0:30:84.28:0,84,1172	1/1:1,8:9:24.08:384,24,0	1/1:0,19:19:51.14:787,51,0	1/1:0,37:37:99:1619,105,0	1/1:0,35:35:99:1581,99,0	1/1:0,24:24:69.23:1090,69,0	0/0:31,0:31:90.30:0,90,1258	0/0:20,0:20:60.19:0,60,823	1/1:1,16:17:48.16:758,48,0	1/1:2,23:25:75.24:1150,75,0	1/1:1,30:31:87.30:1375,87,0	1/1:0,12:12:36.12:575,36,0
chr10	40994663	.	AG	A	215.41	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=3.264;DP=390;FS=1.886;HRun=6;HaplotypeScore=78.9065;InbreedingCoeff=0.8553;MQ=59.06;MQ0=38;MQRankSum=-2.234;QD=5.67;ReadPosRankSum=-1.424;VQSLOD=-0.4133;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,1:27:62.95:0,63,769	0/0:6,1:6:15.04:0,15,188	0/0:27,1:19:31.86:0,32,419	0/0:33,0:22:34.44:0,34,491	0/0:18,0:16:21.07:0,21,275	1/1:1,4:4:12.03:128,12,0	1/1:7,9:15:15.50:161,16,0	0/0:19,0:15:11.31:0,11,152	1/1:7,0:6:5.64:20,6,0	0/0:15,0:14:30.09:0,30,384	0/0:10,0:10:24.08:0,24,308	0/0:16,0:16:42.14:0,42,547	1/1:10,0:9:13.47:52,13,0	0/0:13,0:12:35.90:0,36,443	0/0:7,0:7:20.99:0,21,240	0/0:12,0:11:27.09:0,27,353	0/0:15,0:14:33.10:0,33,422	0/0:9,1:8:5.98:0,6,47	0/0:10,0:8:18.06:0,18,232	0/0:8,0:7:17.98:0,18,199	0/0:11,0:11:15.02:0,15,180	0/0:12,1:10:18.53:0,19,231	0/0:11,0:10:21.03:0,21,256	0/0:18,0:14:24.07:0,24,301	0/0:7,0:6:15.05:0,15,197	0/0:17,0:13:27.09:0,27,355	0/0:12,0:13:13.90:0,14,398	0/0:8,0:4:6.02:0,6,74
chr10	40994668	.	G	GA	298.62	PASS	AB=0.800;AC=4;AF=0.071;AN=56;BaseQRankSum=1.320;DP=356;FS=7.026;HRun=0;HaplotypeScore=72.6843;InbreedingCoeff=0.3536;MQ=53.80;MQ0=41;MQRankSum=-2.100;QD=9.95;ReadPosRankSum=-1.247;VQSLOD=3.1737;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:25:66.01:0,66,831	0/0:7,0:6:14.98:0,15,205	0/0:23,0:15:30.39:0,30,443	0/0:29,0:19:5.28:0,5,490	0/0:16,0:14:21.07:0,21,288	0/0:5,0:4:3.49:0,3,8	0/1:15,0:13:20.15:20,0,38	0/0:15,0:11:18.09:0,18,191	0/1:2,4:5:1.94:167,0,2	0/0:13,0:12:28.64:0,29,379	0/0:10,0:10:24.03:0,24,310	0/0:15,0:15:42.14:0,42,578	1/1:3,6:8:2.13:212,2,0	0/0:13,0:12:35.85:0,36,465	0/0:7,0:7:21:0,21,252	0/0:11,0:10:27.09:0,27,376	0/0:15,0:13:33.11:0,33,458	0/0:10,0:7:5.71:0,6,32	0/0:9,0:7:18.05:0,18,237	0/0:8,0:7:17.98:0,18,208	0/0:11,0:11:17.98:0,18,208	0/0:13,0:10:18.53:0,19,246	0/0:10,0:9:21.03:0,21,269	0/0:15,0:11:24.07:0,24,312	0/0:6,0:5:15.05:0,15,203	0/0:14,0:10:27.09:0,27,375	0/0:13,0:13:13.79:0,14,420	0/0:8,0:4:6.02:0,6,78
chr10	40994674	.	A	AGG	2461.22	PASS	AB=0.824;AC=44;AF=0.786;AN=56;BaseQRankSum=3.520;DP=321;FS=6.135;HRun=3;HaplotypeScore=64.8594;InbreedingCoeff=0.6201;MQ=44.56;MQ0=42;MQRankSum=-2.859;QD=10.00;ReadPosRankSum=-0.034;VQSLOD=0.1326;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:23:44.04:387,44,0	1/1:7,0:6:9.03:78,9,0	0/0:17,0:10:20.38:0,20,172	0/0:24,0:14:18.89:0,19,251	1/1:15,0:13:14.86:109,15,0	1/1:5,0:4:11.87:80,12,0	1/1:12,0:11:14.79:111,15,0	1/1:13,0:9:11.35:79,11,0	1/1:5,0:4:8.89:59,9,0	1/1:15,0:14:6.75:188,7,0	1/1:10,0:10:14.52:127,15,0	0/0:13,0:13:29.31:0,29,192	1/1:8,0:7:17.76:116,18,0	1/1:12,0:11:29.58:222,30,0	1/1:6,0:6:14.81:102,15,0	1/1:11,0:10:17.75:178,18,0	0/1:11,0:9:23.67:96,0,24	0/1:5,6:8:5.56:62,0,6	1/1:7,0:5:11.80:78,12,0	1/1:6,0:5:11.91:87,12,0	1/1:10,0:9:8.79:65,9,0	1/1:13,0:10:11.86:80,12,0	0/0:8,0:7:14.84:0,15,103	0/0:12,0:8:17.71:0,18,132	1/1:6,0:5:7.48:61,7,0	1/1:15,0:11:3.79:143,4,0	1/1:10,0:10:0.74:95,1,0	1/1:9,0:5:5.88:38,6,0
chr10	40995386	.	TGC	T	1627.12	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.941;DP=688;FS=3.827;HRun=0;HaplotypeScore=89.8855;InbreedingCoeff=0.9958;MQ=71.72;MQ0=2;MQRankSum=1.584;QD=36.98;ReadPosRankSum=0.723;VQSLOD=5.4353;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,117,2361	0/0:6,0:6:18.03:0,18,325	0/0:26,0:26:69.75:0,70,1350	0/0:19,0:19:45:0,45,924	0/0:18,0:18:48.16:0,48,969	1/1:0,23:21:57.15:898,57,0	1/1:0,21:21:54.14:850,54,0	0/0:24,0:24:69.14:0,69,1283	0/0:23,0:23:66.23:0,66,1327	0/0:18,0:18:54.16:0,54,995	0/0:26,0:26:72.25:0,72,1441	0/0:28,0:28:84.27:0,84,1638	0/0:23,0:23:69.21:0,69,1306	0/0:27,0:27:72.23:0,72,1388	0/0:37,0:37:99:0,108,2109	0/0:25,0:25:71.61:0,72,1385	0/0:22,0:22:66.20:0,66,1289	0/0:13,0:13:39.13:0,39,774	0/0:23,0:23:57.98:0,58,1190	0/0:17,0:17:51.17:0,51,1011	0/0:56,0:56:99:0,163,3266	0/0:22,0:22:60.21:0,60,1213	0/0:14,0:14:39.11:0,39,718	0/0:34,0:34:99:0,99,2006	0/0:22,0:22:60.19:0,60,1178	0/0:36,0:36:99:0,108,2085	0/0:25,0:25:69.17:0,69,1272	0/0:19,0:18:51.02:0,51,1033
chr10	40995515	.	CCT	C	100.56	PASS	AB=0.973;AC=14;AF=0.333;AN=42;BaseQRankSum=4.276;DP=568;FS=17.094;HRun=0;HaplotypeScore=80.7259;InbreedingCoeff=0.0640;MQ=60.51;MQ0=21;MQRankSum=-0.064;QD=0.46;ReadPosRankSum=-0.212;VQSLOD=0.4398;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:29:2.22:7,2,0	./.	./.	./.	0/1:21,0:21:0.01:0,0,0	1/1:9,0:9:2.84:14,3,0	0/1:23,0:21:7.83:31,0,8	0/0:26,0:25:4.22:0,4,24	0/0:20,0:19:1.72:0,2,5	0/1:19,0:19:19.81:24,0,20	./.	0/1:23,3:26:23.61:24,0,41	0/0:20,0:20:11.98:0,12,116	0/1:20,0:19:4.07:4,0,10	0/0:28,0:27:11.99:0,12,131	0/1:19,0:18:0.72:3,0,1	1/1:17,0:17:2.84:14,3,0	0/1:14,0:14:11.34:11,0,17	0/0:23,0:22:4.22:0,4,24	./.	0/0:27,0:26:11.46:0,11,80	0/0:9,0:9:0:0,0,0	0/0:13,0:13:2.99:0,3,24	0/1:21,3:22:28.26:84,0,28	./.	0/0:21,0:21:4.25:0,4,31	0/0:15,0:14:14.93:0,15,158	./.
chr10	40995553	.	TCTCTCTCTCTCC	T	2255.58	PASS	AB=0.999;AC=26;AF=0.464;AN=56;BaseQRankSum=-2.155;DP=499;FS=2.532;HRun=0;HaplotypeScore=148.1623;InbreedingCoeff=-0.2875;MQ=51.12;MQ0=23;MQRankSum=2.996;QD=5.74;ReadPosRankSum=-3.090;VQSLOD=1.3357;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:42,0:43:99:320,0,380	0/0:3,0:3:2.97:0,3,20	0/0:21,0:13:23.39:0,23,228	0/0:25,0:12:29.10:0,29,245	1/1:4,20:23:14.96:201,15,0	0/1:15,0:14:80.20:166,0,80	0/1:29,0:27:99:250,0,100	0/1:18,0:15:99:173,0,279	0/1:23,0:21:93.94:94,0,649	0/1:11,0:11:38.71:39,0,402	1/1:6,0:5:8.83:65,9,0	0/0:21,0:20:47.79:0,48,962	0/1:18,0:17:23.29:23,0,561	1/1:20,0:19:6.04:298,6,0	0/1:23,0:21:99:106,0,584	1/1:3,16:18:5.54:129,6,0	0/1:20,0:19:7.13:7,0,39	0/1:11,0:10:7.44:7,0,218	0/1:16,0:14:50.27:50,0,358	0/1:11,0:10:0:0,0,0	0/1:24,0:24:99:122,0,471	0/1:13,0:13:60.76:133,0,61	0/0:8,0:8:24:0,24,362	0/0:27,0:24:57.57:0,58,1183	0/1:9,0:8:40.36:68,0,40	0/1:17,0:17:99:118,0,480	0/1:16,0:15:39.18:39,0,783	0/1:7,0:4:12.96:13,0,134
chr10	40995557	.	TCTCTCTCC	T	3219.26	PASS	AB=1.000;AC=29;AF=0.537;AN=54;BaseQRankSum=-3.531;DP=493;FS=9.835;HRun=0;HaplotypeScore=125.5567;InbreedingCoeff=-0.1090;MQ=53.02;MQ0=22;MQRankSum=3.096;QD=8.38;ReadPosRankSum=-0.329;VQSLOD=1.9588;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:40,0:40:11.36:533,0,11	./.	0/0:22,0:14:25.49:0,25,216	0/0:28,0:12:28.88:0,29,206	1/1:24,0:23:6.36:57,6,0	1/1:17,0:16:9.94:282,10,0	1/1:28,0:26:33.91:573,34,0	0/1:17,0:15:99:195,0,147	0/1:25,0:23:99:139,0,281	0/1:11,0:11:85.04:85,0,131	1/1:6,0:5:8.83:65,9,0	0/0:20,0:19:44.64:0,45,657	0/1:15,0:14:27.26:27,0,315	1/1:17,0:17:26.73:315,27,0	0/1:23,0:21:99:109,0,317	0/1:18,0:17:16.49:52,0,16	1/1:1,17:17:3.01:87,3,0	0/1:11,0:10:49.10:49,0,95	0/1:15,0:13:79.61:80,0,146	0/1:11,0:10:0:0,0,0	0/1:23,0:23:99:161,0,255	1/1:15,0:15:10.84:228,11,0	0/0:10,0:10:29.89:0,30,297	0/0:29,0:26:60.08:0,60,872	0/1:9,0:8:8.18:84,0,8	0/1:15,0:15:99:154,0,200	0/1:17,0:16:61.56:62,0,498	0/1:8,0:5:50.22:54,0,50
chr10	40995563	.	TCC	T	4622.52	PASS	AB=0.888;AC=42;AF=0.750;AN=56;BaseQRankSum=-2.772;DP=490;FS=2.481;HRun=5;HaplotypeScore=82.0254;InbreedingCoeff=0.6162;MQ=54.30;MQ0=18;MQRankSum=0.273;QD=12.33;ReadPosRankSum=1.493;VQSLOD=0.9217;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:37,0:37:88.66:701,89,0	1/1:1,0:1:2.97:20,3,0	0/0:24,0:15:27.39:0,27,226	0/0:31,0:12:28.88:0,29,206	1/1:24,0:23:5.86:35,6,0	1/1:17,0:16:35.91:292,36,0	1/1:30,0:28:62.96:505,63,0	1/1:6,10:14:18.25:225,18,0	1/1:21,0:21:47.46:365,47,0	1/1:11,0:11:29.73:231,30,0	1/1:8,0:7:11.83:89,12,0	0/0:19,0:18:31.55:0,32,280	0/1:13,0:12:2.86:91,0,3	1/1:21,0:20:43.84:335,44,0	0/1:22,0:21:6.40:210,0,6	1/1:17,0:17:2.76:16,3,0	1/1:17,0:17:3:26,3,0	1/1:11,0:10:17.91:138,18,0	1/1:14,0:12:28.68:175,29,0	0/1:2,9:10:0:0,0,0	1/1:24,0:24:41.61:324,42,0	1/1:13,0:13:29.89:238,30,0	0/0:12,0:12:26.86:0,27,209	0/0:29,0:26:40.15:0,40,459	1/1:8,0:7:14.71:101,15,0	1/1:13,0:13:33:297,33,0	0/1:16,0:16:20.32:117,0,20	1/1:9,0:6:13.80:89,14,0
chr10	40995649	.	TG	T	2254.03	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.259;DP=712;FS=0.000;HRun=2;HaplotypeScore=83.9532;InbreedingCoeff=0.9956;MQ=73.94;MQ0=0;MQRankSum=-0.488;QD=34.68;ReadPosRankSum=2.645;VQSLOD=4.0421;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,126,1835	0/0:6,0:6:18.06:0,18,267	0/0:19,0:19:54.01:0,54,721	0/0:19,0:17:42.61:0,43,612	0/0:30,0:30:78.13:0,78,1110	0/0:25,0:25:75.24:0,75,1099	0/0:38,0:38:99:0,108,1598	0/0:26,0:26:78.24:0,78,1115	1/1:1,31:32:93.30:1207,93,0	0/0:23,0:23:66.22:0,66,989	0/0:24,0:24:66.04:0,66,911	0/0:24,0:24:69.23:0,69,1013	1/1:2,31:33:90.29:1168,90,0	0/0:31,0:31:93.29:0,93,1353	0/0:24,0:24:72.23:0,72,1059	0/0:23,0:23:63.21:0,63,944	0/0:13,0:13:36.12:0,36,539	0/0:20,0:20:57.15:0,57,829	0/0:28,0:28:69.22:0,69,1015	0/0:18,0:18:51.17:0,51,763	0/0:41,0:41:99:0,117,1725	0/0:24,0:24:66.16:0,66,961	0/0:15,0:15:42.06:0,42,601	0/0:42,0:42:99:0,126,1879	0/0:31,0:31:90.19:0,90,1260	0/0:30,0:30:78.26:0,78,1148	0/0:13,0:13:39.13:0,39,583	0/0:11,0:11:33.06:0,33,468
chr10	40996917	.	GTCTC	G	325.32	PASS	AB=0.952;AC=6;AF=0.115;AN=52;BaseQRankSum=4.110;DP=762;FS=0.830;HRun=0;HaplotypeScore=141.0034;InbreedingCoeff=0.5484;MQ=46.38;MQ0=60;MQRankSum=2.663;QD=4.12;ReadPosRankSum=-0.684;VQSLOD=2.5110;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:39:63.17:0,63,1344	0/0:11,0:10:15.04:0,15,297	./.	./.	0/0:25,0:23:3.01:0,3,49	1/1:12,3:12:21.05:282,21,0	1/1:17,1:14:14.91:155,15,0	0/0:44,0:15:38.97:0,39,611	0/0:32,1:30:4.35:0,4,96	0/0:39,0:31:87.20:0,87,1854	0/0:14,0:12:24.07:0,24,541	0/0:19,0:19:51.61:0,52,1151	0/1:27,0:22:6.68:7,0,82	0/0:20,0:19:1.62:0,2,42	0/0:37,0:36:96.29:0,96,2261	0/0:22,0:20:25.66:0,26,275	0/1:17,0:15:2.76:3,0,110	0/0:30,0:30:58.03:0,58,1659	0/0:38,0:20:50.91:0,51,1185	0/0:46,0:45:99:0,108,2354	0/0:46,1:44:90.75:0,91,2080	0/0:31,0:30:72.18:0,72,1655	0/0:25,0:24:38.99:0,39,746	0/0:38,0:34:75.24:0,75,1809	0/0:20,0:19:45.11:0,45,971	0/0:44,0:36:38:0,38,1893	0/0:33,0:31:81.28:0,81,1979	0/0:24,0:23:63.12:0,63,1325
chr10	40996927	.	GTCTCTCTCTGTCTCTGTC	G	781.26	PASS	AB=0.861;AC=12;AF=0.240;AN=50;BaseQRankSum=2.687;DP=746;FS=3.948;HRun=0;HaplotypeScore=279.5217;InbreedingCoeff=0.7121;MQ=45.48;MQ0=60;MQRankSum=1.669;QD=5.21;ReadPosRankSum=-2.536;VQSLOD=1.9898;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:36:54.16:0,54,1315	0/0:10,0:9:14.20:0,14,229	./.	./.	./.	1/1:14,0:11:5.88:44,6,0	1/1:13,0:9:2.49:7,2,0	0/0:48,0:14:16.68:0,17,230	0/1:27,0:29:5.05:5,0,15	0/0:42,0:33:81.29:0,81,2008	0/0:14,0:12:24.08:0,24,816	0/0:19,0:19:52.03:0,52,1376	0/1:21,0:24:38.16:38,0,146	1/1:22,0:20:11.57:189,12,0	0/0:33,0:32:87.10:0,87,2610	1/1:21,0:18:21.07:502,21,0	1/1:15,0:13:11.81:151,12,0	0/0:36,0:33:74.36:0,74,2604	0/0:32,0:16:42.14:0,42,1272	0/0:44,0:43:99:0,101,2735	0/0:47,0:44:81.72:0,82,2370	0/0:30,0:28:72.23:0,72,2136	0/0:22,0:20:30.10:0,30,827	0/0:41,0:36:78.25:0,78,2400	0/0:20,0:19:39.11:0,39,1168	0/0:40,0:35:93.85:0,94,2429	0/0:32,0:30:78.25:0,78,2155	0/0:21,0:20:54.19:0,54,1806
chr10	40996929	.	C	CTCTG	664.88	PASS	AB=1.000;AC=12;AF=0.240;AN=50;BaseQRankSum=3.779;DP=737;FS=5.324;HRun=0;HaplotypeScore=141.3686;InbreedingCoeff=0.7028;MQ=45.53;MQ0=58;MQRankSum=0.348;QD=4.49;ReadPosRankSum=-3.349;VQSLOD=0.9901;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:38:54.16:0,54,934	0/0:10,0:9:11.13:0,11,160	./.	./.	./.	1/1:14,0:11:5.88:44,6,0	1/1:16,0:11:2.49:7,2,0	0/0:44,0:13:31.17:0,31,430	0/1:32,0:29:10.53:11,0,26	0/0:43,0:35:93.93:0,94,1430	0/0:14,0:12:24.08:0,24,455	0/0:19,0:19:51.14:0,51,876	0/1:29,0:24:11.28:53,0,11	1/1:16,6:20:12.01:190,12,0	0/0:32,0:31:87.10:0,87,1532	1/1:18,0:15:21.07:401,21,0	1/1:16,1:13:11.56:116,12,0	0/0:36,0:33:90.21:0,90,1546	0/0:29,0:16:42.14:0,42,780	0/0:43,0:42:99:0,107,1880	0/0:48,0:44:84.67:0,85,1447	0/0:30,0:28:72.22:0,72,1285	0/0:22,0:20:33.10:0,33,568	0/0:41,0:36:78.25:0,78,1420	0/0:20,0:19:39.11:0,39,669	0/0:42,0:35:93.40:0,93,1531	0/0:31,0:29:81.14:0,81,1444	0/0:21,0:20:57.13:0,57,1015
chr10	40996931	.	CTCTCTG	C	33.85	PASS	AB=0.972;AC=8;AF=0.160;AN=50;BaseQRankSum=5.236;DP=732;FS=0.000;HRun=0;HaplotypeScore=158.5057;InbreedingCoeff=0.4433;MQ=45.45;MQ0=56;MQRankSum=-1.082;QD=0.28;ReadPosRankSum=-2.125;VQSLOD=2.4254;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:39:45.08:0,45,902	0/0:10,0:9:8.92:0,9,102	./.	./.	0/1:20,0:18:0:0,0,0	1/1:12,0:9:2.97:10,3,0	./.	0/0:41,0:11:9.42:0,9,366	0/1:26,4:29:4.26:55,0,4	0/0:41,0:33:83.47:0,83,1793	0/0:13,0:11:24.08:0,24,628	0/0:18,0:18:40.95:0,41,885	0/0:25,4:25:11.80:0,12,105	1/1:22,0:20:3.40:26,3,0	0/0:33,0:32:78.16:0,78,1825	0/1:18,0:15:5.65:33,0,6	0/1:18,0:14:21.24:26,0,21	0/0:37,0:34:92.93:0,93,1934	0/0:28,0:16:36.12:0,36,963	0/0:43,0:42:91.61:0,92,1983	0/0:45,0:42:75.24:0,75,1688	0/0:30,0:28:69.23:0,69,1536	0/0:21,0:19:36.10:0,36,746	0/0:38,0:34:72.22:0,72,1687	0/0:20,0:19:36.12:0,36,787	0/0:42,0:35:93.36:0,93,1978	0/0:35,0:32:73.47:0,73,1639	0/0:21,0:20:54.10:0,54,1357
chr10	40996935	.	CTG	C	289.56	PASS	AB=1.000;AC=12;AF=0.231;AN=52;BaseQRankSum=6.240;DP=721;FS=4.434;HRun=0;HaplotypeScore=118.0158;InbreedingCoeff=0.7346;MQ=45.06;MQ0=53;MQRankSum=-2.194;QD=2.19;ReadPosRankSum=-3.552;VQSLOD=1.2618;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:38:57.01:0,57,896	0/0:9,0:8:11.98:0,12,159	./.	./.	0/1:20,0:18:0:0,0,0	1/1:11,0:8:5.97:28,6,0	1/1:14,0:9:0.47:1,0,0	0/0:44,0:12:34.55:0,35,461	0/1:30,0:27:4.74:5,0,22	0/0:38,0:32:50.22:0,50,1438	0/0:15,0:12:27.07:0,27,485	0/0:20,0:20:51.05:0,51,846	0/0:27,0:22:9.53:0,10,85	1/1:16,6:20:4.09:88,4,0	0/0:32,0:31:81.15:0,81,1512	1/1:15,4:16:20.99:261,21,0	1/1:13,3:12:8.05:45,8,0	0/0:37,0:34:95.87:0,96,1636	0/0:27,0:16:48.10:0,48,763	0/0:41,0:41:96.66:0,97,1821	0/0:46,0:42:84.48:0,84,1477	0/0:28,0:26:72.22:0,72,1310	0/0:22,0:20:36.11:0,36,606	0/0:38,1:34:78.25:0,78,1453	0/0:21,0:20:35.33:0,35,643	0/0:43,0:36:61.03:0,61,1569	0/0:35,0:32:94.43:0,94,1452	0/0:21,0:20:57.20:0,57,1058
chr10	40996951	.	G	GTC	73.07	PASS	AB=0.911;AC=9;AF=0.196;AN=46;BaseQRankSum=5.177;DP=714;FS=4.673;HRun=0;HaplotypeScore=102.4435;InbreedingCoeff=0.5366;MQ=44.40;MQ0=65;MQRankSum=-3.385;QD=0.65;ReadPosRankSum=-1.547;VQSLOD=1.4727;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:35:33.09:0,33,415	1/1:6,0:5:5.49:34,5,0	./.	./.	./.	./.	./.	0/0:59,0:15:22.85:0,23,468	0/1:21,3:23:8.14:8,0,17	0/0:36,0:30:78.12:0,78,1007	0/0:19,0:16:33.10:0,33,424	0/0:18,0:17:39.13:0,39,518	0/1:22,4:21:58.14:58,0,105	1/1:23,0:19:0.94:1,1,0	0/0:26,0:25:63.21:0,63,834	0/1:18,0:13:0:0,0,0	1/1:14,1:11:6.02:84,6,0	0/0:40,0:37:93.27:0,93,1201	0/0:27,0:14:39.13:0,39,519	0/0:35,0:35:64.29:0,64,1031	0/0:43,0:38:71.88:0,72,896	0/0:29,0:27:57.19:0,57,758	0/0:22,0:19:36.12:0,36,478	0/0:39,0:34:72.21:0,72,937	0/0:22,0:21:39.13:0,39,516	0/0:42,0:37:87.25:0,87,1120	0/0:31,0:28:75.23:0,75,969	0/0:21,0:20:23.27:0,23,675
chr10	40996969	.	GTCTCTGTC	G	151.59	PASS	AB=0.871;AC=7;AF=0.140;AN=50;BaseQRankSum=2.217;DP=716;FS=9.279;HRun=0;HaplotypeScore=139.8650;InbreedingCoeff=0.4623;MQ=45.08;MQ0=59;MQRankSum=-1.443;QD=1.39;ReadPosRankSum=-1.351;VQSLOD=2.1005;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:35:18.06:0,18,582	0/0:4,0:4:0.89:0,1,2	./.	./.	./.	0/0:16,0:13:9.03:0,9,234	0/0:21,0:18:27.09:0,27,749	0/0:47,0:10:15.02:0,15,216	0/1:25,0:24:46.36:49,0,46	0/0:41,0:33:72.23:0,72,2037	0/0:20,0:16:33.11:0,33,1050	0/0:18,0:17:36.12:0,36,1028	0/1:29,0:22:50.04:50,0,182	0/1:11,13:20:0:0,0,0	0/0:25,0:23:39.13:0,39,1186	1/1:11,4:11:6.02:153,6,0	1/1:10,2:8:2.37:8,2,0	0/0:43,0:41:82.16:0,82,2238	0/0:33,0:16:31.92:0,32,983	0/0:35,0:34:66.68:0,67,1962	0/0:41,0:34:54.18:0,54,1624	0/0:31,0:29:39.13:0,39,1074	0/0:19,0:16:41.93:0,42,1215	0/0:39,0:35:72.21:0,72,2227	0/0:23,0:22:42.14:0,42,1188	0/0:34,0:30:51.16:0,51,1497	0/0:28,0:25:48.16:0,48,1633	0/0:24,0:24:63.21:0,63,1594
chr10	40996971	.	CTCTG	C	54.23	PASS	AB=0.969;AC=7;AF=0.135;AN=52;BaseQRankSum=4.314;DP=720;FS=1.185;HRun=0;HaplotypeScore=101.7057;InbreedingCoeff=0.3658;MQ=44.95;MQ0=58;MQRankSum=-2.125;QD=0.60;ReadPosRankSum=-1.272;VQSLOD=1.9268;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:35:33.11:0,33,732	1/1:0,4:4:1.72:34,2,0	./.	./.	0/0:20,0:18:2.37:0,2,8	0/0:16,0:13:9.03:0,9,227	0/0:22,0:19:30.10:0,30,696	0/0:47,0:12:35.79:0,36,685	0/1:28,1:25:21.20:21,0,27	0/0:41,0:33:93.27:0,93,2156	0/0:21,0:17:39.13:0,39,965	0/0:19,0:17:45.15:0,45,1053	0/1:30,2:22:48.24:48,0,257	0/0:24,0:20:1.72:0,2,4	0/0:25,0:23:60.16:0,60,1302	1/1:15,0:11:5.92:40,6,0	0/1:11,0:7:7.52:32,0,8	0/0:40,0:38:99:0,102,2410	0/0:33,0:16:36.16:0,36,981	0/0:35,0:34:84.13:0,84,1959	0/0:41,0:34:69.17:0,69,1529	0/0:31,0:28:48.16:0,48,1191	0/0:19,0:16:45.15:0,45,1048	0/0:39,0:35:84.24:0,84,2061	0/0:24,0:23:51.17:0,51,1225	0/0:33,0:29:63.59:0,64,1714	0/0:28,0:25:64.44:0,64,1536	0/0:24,0:24:69.24:0,69,1731
chr10	40997021	.	CTG	C	79.85	PASS	AB=0.909;AC=5;AF=0.096;AN=52;BaseQRankSum=5.481;DP=808;FS=8.142;HRun=0;HaplotypeScore=97.8208;InbreedingCoeff=0.6217;MQ=48.36;MQ0=52;MQRankSum=-4.871;QD=1.04;ReadPosRankSum=-1.880;VQSLOD=0.8778;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:39:15.03:0,15,236	0/0:7,1:8:2.97:0,3,21	./.	./.	0/0:29,0:28:42.04:0,42,703	0/0:33,0:31:65.18:0,65,1059	0/0:40,0:38:77.92:0,78,1440	0/0:54,0:22:57.18:0,57,996	1/1:13,13:19:3.48:45,3,0	0/0:43,0:36:94.48:0,94,1692	0/0:24,0:24:60.21:0,60,1141	0/0:20,0:18:48.13:0,48,834	1/1:20,11:23:14.06:131,14,0	0/0:28,0:25:29.83:0,30,576	0/0:43,0:43:99:0,120,2250	0/0:25,0:22:37.19:0,37,950	0/1:18,2:13:16.22:16,0,337	0/0:30,1:30:38.06:0,38,1316	0/0:33,0:27:78.19:0,78,1360	0/0:37,0:36:84.06:0,84,1595	0/0:31,0:26:63.09:0,63,1130	0/0:29,0:27:14.98:0,15,130	0/0:32,0:30:63.18:0,63,1114	0/0:46,1:44:99:0,105,1964	0/0:21,0:20:54.16:0,54,974	0/0:30,0:26:58.21:0,58,1223	0/0:29,0:28:81.26:0,81,1499	0/0:20,0:19:57.20:0,57,1084
chr10	40997023	.	G	GTCTC	133.22	PASS	AC=4;AF=0.077;AN=52;BaseQRankSum=5.423;DP=805;FS=1.229;HRun=0;HaplotypeScore=125.6481;InbreedingCoeff=0.7306;MQ=48.53;MQ0=54;MQRankSum=-3.726;QD=2.34;ReadPosRankSum=-1.980;VQSLOD=2.0957;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:40:15.01:0,15,197	0/0:8,0:8:3:0,3,29	./.	./.	0/0:29,0:28:45.04:0,45,696	0/0:33,0:31:62.18:0,62,991	0/0:39,0:38:75.14:0,75,1248	0/0:52,0:19:37.92:0,38,716	1/1:23,3:19:0.94:2,1,0	0/0:43,0:36:87.21:0,87,1479	0/0:24,0:24:60.21:0,60,1085	0/0:19,0:17:48.13:0,48,773	1/1:23,8:23:13.12:219,13,0	0/0:28,0:25:30.08:0,30,548	0/0:43,0:43:99:0,117,2090	0/0:26,0:23:37.19:0,37,899	0/0:21,0:15:12.04:0,12,334	0/0:30,0:30:68.69:0,69,1131	0/0:34,0:26:72.24:0,72,1228	0/0:35,0:34:84.29:0,84,1513	0/0:31,0:26:60.10:0,60,1053	0/0:29,0:27:9:0,9,87	0/0:33,0:31:53.97:0,54,935	0/0:46,0:43:99:0,102,1848	0/0:22,0:20:51.16:0,51,900	0/0:29,0:26:49.31:0,49,1078	0/0:28,0:27:78.19:0,78,1293	0/0:21,0:20:57.19:0,57,1043
chr10	40997099	.	G	GTC	229.21	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-0.644;DP=794;FS=1.255;HRun=0;HaplotypeScore=112.5358;InbreedingCoeff=0.7596;MQ=52.07;MQ0=29;MQRankSum=1.019;QD=12.73;ReadPosRankSum=2.281;VQSLOD=3.3962;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:38:75.23:0,75,1005	1/1:2,16:18:18.03:320,18,0	0/0:9,0:2:0.87:0,1,37	0/0:20,0:4:12:0,12,137	0/0:29,0:29:69.23:0,69,940	0/0:26,0:26:68.97:0,69,859	0/0:37,0:35:77.77:0,78,1031	0/0:44,0:17:45.14:0,45,578	0/0:20,0:18:12.04:0,12,164	0/0:32,0:32:84.24:0,84,1111	0/0:33,0:33:78.24:0,78,1033	0/0:22,0:22:50.88:0,51,662	0/0:25,0:19:30.10:0,30,402	0/0:21,0:21:45.93:0,46,608	0/0:36,0:36:87.19:0,87,1169	0/0:20,0:20:36.03:0,36,455	0/0:30,0:28:61.46:0,61,782	0/0:37,0:32:66.39:0,66,908	0/0:23,0:17:48.15:0,48,636	0/0:38,0:38:95.97:0,96,1267	0/0:26,0:22:57.19:0,57,772	0/0:25,0:25:54.16:0,54,739	0/0:33,0:33:84.24:0,84,1087	0/0:38,0:37:30.71:0,31,978	0/0:19,0:19:48.16:0,48,656	0/0:41,0:39:99:0,105,1362	0/0:35,0:34:84.21:0,84,1064	0/0:16,0:15:32.05:0,32,450
chr10	40998881	.	GCTCAGGGC	G	3067.30	PASS	AB=0.553;AC=3;AF=0.054;AN=56;BaseQRankSum=9.748;DP=615;FS=11.962;HRun=0;HaplotypeScore=156.5851;InbreedingCoeff=0.6472;MQ=84.70;MQ0=0;MQRankSum=-10.181;QD=66.68;ReadPosRankSum=0.251;VQSLOD=3.2936;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:96.29:0,96,4059	0/0:11,0:11:30.10:0,30,1329	0/0:27,0:28:71.72:0,72,2614	0/0:33,0:32:81.28:0,81,3228	0/0:23,0:23:66.20:0,66,2589	0/0:14,0:14:42.14:0,42,1840	0/0:19,0:19:54.17:0,54,2222	0/0:32,0:32:90.28:0,90,3493	0/1:4,17:21:84.83:1225,0,85	0/0:14,0:14:42.14:0,42,1503	0/0:19,0:19:54.15:0,54,2133	0/0:17,0:17:51.18:0,51,2079	1/1:2,23:25:69.24:1949,69,0	0/0:29,0:29:87.30:0,87,3830	0/0:21,0:21:63.22:0,63,2756	0/0:20,0:20:60.19:0,60,2493	0/0:37,0:37:99:0,111,4713	0/0:22,0:22:66.19:0,66,2704	0/0:14,0:14:39.13:0,39,1706	0/0:16,0:16:48.16:0,48,2126	0/0:39,0:39:99:0,117,5121	0/0:21,0:21:57.20:0,57,2504	0/0:20,0:20:54.15:0,54,2113	0/0:18,0:18:54.19:0,54,2394	0/0:13,0:13:36.12:0,36,1397	0/0:18,0:18:51.17:0,51,2179	0/0:25,0:25:75.26:0,75,3235	0/0:10,0:10:30.10:0,30,1330
chr10	40999844	.	G	GT	3731.78	PASS	AB=0.700;AC=21;AF=0.375;AN=56;BaseQRankSum=-9.458;DP=541;FS=1.220;HRun=11;HaplotypeScore=59.6645;InbreedingCoeff=0.7747;MQ=78.43;MQ0=0;MQRankSum=1.452;QD=16.73;ReadPosRankSum=-0.854;VQSLOD=4.1556;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,24:31:51.39:657,51,0	1/1:0,4:5:14.86:136,15,0	0/1:24,1:22:0.40:0,0,87	0/0:22,0:15:5.73:0,6,80	1/1:0,16:17:50.80:469,51,0	0/1:6,22:30:10.65:467,0,11	1/1:2,12:14:33.07:335,33,0	0/0:22,2:24:26.30:0,26,386	1/1:4,15:19:9.83:281,10,0	0/0:26,0:26:56.76:0,57,440	0/0:20,0:21:55.79:0,56,420	0/0:15,0:16:37.85:0,38,278	1/1:1,13:14:27.05:274,27,0	1/1:2,10:12:6.82:251,7,0	0/0:21,0:21:50.76:0,51,390	1/1:3,10:14:20.99:202,21,0	1/1:8,20:29:27.44:430,27,0	0/0:26,1:27:32.30:0,32,434	0/0:22,1:23:29.30:0,29,406	0/0:18,1:19:23.36:0,23,364	0/0:15,0:15:38.85:0,39,302	0/1:3,9:12:13.36:230,0,13	0/0:18,0:19:40.78:0,41,301	0/0:16,0:16:41.82:0,42,325	0/0:17,0:17:44.82:0,45,348	0/0:17,0:17:50.62:0,51,385	0/0:25,0:25:65.74:0,66,510	0/0:10,0:10:26.88:0,27,209
chr10	41000219	.	AACATGCAC	A	2569.06	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.279;DP=749;FS=3.140;HRun=0;HaplotypeScore=186.6271;InbreedingCoeff=0.9823;MQ=82.51;MQ0=0;MQRankSum=-9.650;QD=49.40;ReadPosRankSum=2.716;VQSLOD=3.7432;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,120,4893	0/0:6,0:6:12.04:0,12,484	0/0:29,0:29:70.06:0,70,2290	0/0:32,0:31:75.20:0,75,2663	0/0:19,0:19:45.15:0,45,1931	0/0:22,0:22:60.21:0,60,2510	0/0:30,0:30:78.21:0,78,3084	0/0:29,0:29:72.23:0,72,2862	1/1:3,24:23:51.14:1309,51,0	0/0:32,0:32:84.29:0,84,3408	0/0:22,0:22:66.23:0,66,2595	0/0:28,0:28:81.28:0,81,3478	1/1:5,20:24:51.01:1382,51,0	0/0:32,0:32:87.30:0,87,3657	0/0:30,0:30:87.28:0,87,3437	0/0:21,0:21:51.18:0,51,2186	0/0:41,0:41:99:0,105,4121	0/0:19,0:19:48.16:0,48,2023	0/0:20,0:20:57.19:0,57,2318	0/0:28,0:28:78.27:0,78,3149	0/0:63,0:62:99:0,184,7592	0/0:26,0:26:66.21:0,66,2619	0/0:17,0:17:45.15:0,45,1828	0/0:32,0:32:87.26:0,87,3552	0/0:19,0:19:54.17:0,54,2165	0/0:26,0:26:75.26:0,75,3224	0/0:21,0:21:57.20:0,57,2436	0/0:9,0:9:21.07:0,21,906
chr10	41000290	.	ATCTC	A	2829.64	PASS	AB=0.667;AC=35;AF=0.673;AN=52;BaseQRankSum=1.706;DP=603;FS=1.617;HRun=0;HaplotypeScore=125.9051;InbreedingCoeff=0.5323;MQ=68.87;MQ0=15;MQRankSum=-4.068;QD=7.90;ReadPosRankSum=-1.094;VQSLOD=2.5653;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,2:25:11.64:0,12,112	1/1:7,0:13:15.02:140,15,0	./.	0/0:47,0:22:0.47:0,0,1	1/1:10,0:21:3.26:28,3,0	1/1:14,0:26:21.02:194,21,0	1/1:22,0:28:9.01:84,9,0	./.	0/0:28,0:25:9.03:0,9,171	1/1:8,0:18:24.49:221,24,0	1/1:7,0:6:3:28,3,0	0/0:14,0:24:20.80:0,21,359	0/0:13,0:14:9.02:0,9,171	1/1:11,0:21:9.01:84,9,0	1/1:15,0:22:12.01:112,12,0	0/1:10,6:24:23.11:309,0,23	0/1:19,13:35:5.30:529,0,5	1/1:14,0:15:3:28,3,0	1/1:11,3:14:8.54:133,9,0	1/1:9,5:14:15.05:234,15,0	1/1:31,7:36:6.02:94,6,0	0/1:6,2:12:42.12:77,0,42	0/0:14,0:19:15.05:0,15,312	0/0:17,0:23:18.06:0,18,365	1/1:4,0:9:6.01:56,6,0	1/1:8,4:12:12.02:163,12,0	1/1:7,7:15:17.78:261,18,0	1/1:5,6:11:12.63:230,13,0
chr10	41000338	.	CAT	C	384.09	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=3.488;DP=691;FS=14.151;HRun=0;HaplotypeScore=122.9058;InbreedingCoeff=0.9603;MQ=58.11;MQ0=18;MQRankSum=-0.342;QD=9.85;ReadPosRankSum=-1.341;VQSLOD=2.1742;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:31:66.70:0,67,1260	0/0:10,0:10:27.09:0,27,496	0/0:24,0:15:39.12:0,39,704	0/0:17,0:8:21.07:0,21,364	0/0:37,0:37:68.90:0,69,1284	0/0:24,0:23:52.73:0,53,921	0/0:23,0:23:51.17:0,51,945	0/0:43,0:39:99:0,117,1912	1/1:1,21:22:8.39:90,8,0	0/0:29,0:29:80.76:0,81,1282	0/0:13,0:12:36.12:0,36,687	0/0:24,0:23:42.90:0,43,843	1/1:12,5:15:30.71:408,31,0	0/0:22,0:22:45.15:0,45,848	0/0:13,0:13:27.09:0,27,499	0/0:27,1:28:24.10:0,24,1129	0/0:40,0:38:99:0,102,1713	0/0:19,0:19:54.12:0,54,954	0/0:16,0:16:37.67:0,38,762	0/0:26,0:26:72.23:0,72,1333	0/0:34,0:34:57.20:0,57,1070	0/0:26,0:26:66.18:0,66,1182	0/0:23,0:23:50.39:0,50,854	0/0:26,0:25:51.21:0,51,1105	0/0:26,0:26:42.14:0,42,766	0/0:31,0:31:90.08:0,90,1511	0/0:21,0:21:57.06:0,57,988	0/0:24,0:23:63.18:0,63,1141
chr10	41001033	.	C	CACAT	5066.59	PASS	AB=0.825;AC=28;AF=0.538;AN=52;BaseQRankSum=4.751;DP=806;FS=0.000;HRun=0;HaplotypeScore=272.2006;InbreedingCoeff=0.8251;MQ=53.55;MQ0=5;MQRankSum=-4.815;QD=11.26;ReadPosRankSum=-1.836;VQSLOD=3.6354;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:41,0:38:23.65:287,24,0	0/1:6,5:13:31.09:266,0,31	./.	./.	1/1:20,4:24:20.92:288,21,0	0/1:30,0:30:99:134,0,301	0/0:37,0:37:30.09:0,30,423	1/1:48,0:47:20.75:137,21,0	0/0:26,0:26:25.54:0,26,217	0/0:46,0:46:53.48:0,53,493	0/0:25,0:25:35.73:0,36,259	0/0:35,0:35:66.22:0,66,1002	0/0:23,0:23:8.23:0,8,63	1/1:26,3:32:20.97:307,21,0	0/0:37,0:37:56.88:0,57,595	1/1:25,5:30:50.88:795,51,0	1/1:21,3:22:23.30:348,23,0	0/0:23,0:22:33.25:0,33,256	1/1:23,0:22:24:310,24,0	1/1:27,0:27:20.67:228,21,0	1/1:32,0:31:11.94:92,12,0	1/1:30,0:30:27.05:341,27,0	0/0:25,0:25:39.09:0,39,530	0/0:27,0:27:20.95:0,21,607	0/0:20,0:20:29.71:0,30,312	1/1:35,0:35:53.93:658,54,0	1/1:36,0:36:47.94:628,48,0	1/1:25,0:25:20.99:248,21,0
chr10	41001036	.	A	ATACATACT	14258.18	PASS	AB=1.000;AC=28;AF=0.500;AN=56;BaseQRankSum=2.093;DP=817;FS=3.861;HRun=0;HaplotypeScore=299.3202;InbreedingCoeff=0.2756;MQ=52.55;MQ0=5;MQRankSum=-2.012;QD=24.50;ReadPosRankSum=-2.935;VQSLOD=3.8060;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:38,5:40:60.58:1254,61,0	0/1:13,0:13:24.43:24,0,177	0/0:12,0:4:9:0,9,82	0/0:18,0:6:14.97:0,15,133	0/1:26,0:26:99:156,0,183	0/0:30,0:30:74.90:0,75,1074	0/0:35,0:35:74.99:0,75,1105	1/1:53,0:52:99:1350,138,0	0/0:28,0:29:41.60:0,42,635	0/1:45,0:45:99:474,0,358	0/1:24,0:24:99:104,0,199	0/0:34,0:34:84.20:0,84,1920	0/0:23,0:23:26.83:0,27,304	0/1:33,0:33:99:483,0,196	0/1:37,0:37:99:276,0,473	0/1:30,0:30:99:466,0,104	0/1:24,0:22:99:238,0,171	0/1:22,0:21:54.33:54,0,248	1/1:24,3:26:58.91:1134,59,0	1/1:25,2:27:68.88:1012,69,0	1/1:36,0:35:68.67:683,69,0	1/1:25,6:31:77.89:1391,78,0	0/0:25,0:25:72.06:0,72,1210	0/0:29,0:29:72.09:0,72,1374	0/1:18,0:18:70.62:71,0,207	1/1:29,3:32:84.19:2018,84,0	1/1:27,9:36:99:2137,108,0	1/1:23,2:25:63.01:933,63,0
chr10	41001059	.	CATACATACATACAT	C	2126.01	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.993;DP=816;FS=1.729;HRun=0;HaplotypeScore=393.5902;InbreedingCoeff=0.9589;MQ=51.60;MQ0=9;MQRankSum=-7.204;QD=40.88;ReadPosRankSum=3.077;VQSLOD=2.0058;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:40:66.49:0,66,2666	0/0:15,0:15:35.15:0,35,1441	0/0:15,0:6:18.06:0,18,299	0/0:20,0:6:17.09:0,17,264	0/0:25,0:25:43.07:0,43,1766	0/0:31,0:31:57.20:0,57,3430	0/0:32,0:32:51.17:0,51,2556	0/0:54,0:53:99:0,157,4491	1/1:2,28:31:22.75:1495,23,0	0/0:37,0:37:99:0,108,5138	0/0:32,0:32:78.74:0,79,3392	0/0:33,0:33:96.33:0,96,5615	1/1:2,19:21:9.11:744,9,0	0/0:36,0:36:78.09:0,78,1965	0/0:32,0:32:75.26:0,75,4296	0/0:29,0:29:69.19:0,69,3033	0/0:24,0:22:44.70:0,45,1814	0/0:21,0:20:54.18:0,54,2834	0/0:25,0:21:63.13:0,63,2382	0/0:27,0:27:62.62:0,63,2044	0/0:31,0:30:36.59:0,37,1384	0/0:33,0:33:66.19:0,66,1926	0/0:25,0:25:75.26:0,75,3539	0/0:31,0:31:81.28:0,81,4516	0/0:22,0:22:48.14:0,48,2328	0/0:30,0:30:87.28:0,87,3578	0/0:39,0:39:81.26:0,81,3074	0/0:23,0:23:66.23:0,66,2202
chr10	41001079	.	CAG	C	3943.68	PASS	AB=0.961;AC=23;AF=0.411;AN=56;BaseQRankSum=5.351;DP=873;FS=36.884;HRun=0;HaplotypeScore=236.6957;InbreedingCoeff=-0.2092;MQ=55.69;MQ0=7;MQRankSum=-2.519;QD=6.23;ReadPosRankSum=0.436;VQSLOD=1.4348;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:42,1:40:99:192,0,169	0/0:17,0:17:41.17:0,41,667	0/0:24,0:17:45.06:0,45,674	0/0:22,0:14:39:0,39,628	0/1:33,0:33:1.04:116,0,1	0/0:36,0:36:34.97:0,35,398	0/0:34,1:35:8.80:0,9,296	0/1:44,0:43:99:288,0,262	1/1:36,0:35:24.65:363,25,0	0/1:37,0:37:99:262,0,418	0/1:34,0:33:99:210,0,263	0/0:42,0:42:99:0,120,2146	1/1:22,0:22:4.44:255,4,0	0/1:31,10:41:2.07:461,0,2	0/1:34,1:35:52.23:52,0,522	0/1:30,3:33:76.36:196,0,76	0/1:21,0:19:75.98:87,0,76	0/1:22,0:21:85.23:85,0,257	0/1:19,8:25:99:233,0,149	0/1:25,3:27:12.77:277,0,13	0/1:30,0:29:26.30:40,0,26	0/1:35,0:35:38.52:182,0,39	0/0:26,0:26:78.22:0,78,1374	0/0:37,0:37:99:0,102,1724	0/1:26,0:26:99:119,0,236	0/1:28,0:28:51.05:206,0,51	0/1:38,0:38:99:136,0,106	1/1:15,5:20:16.50:182,17,0
chr10	41001081	.	G	GAC	14127.29	PASS	AB=0.815;AC=40;AF=0.714;AN=56;BaseQRankSum=1.733;DP=890;FS=11.366;HRun=0;HaplotypeScore=205.2379;InbreedingCoeff=0.6328;MQ=55.89;MQ0=8;MQRankSum=-2.540;QD=19.68;ReadPosRankSum=2.995;VQSLOD=4.3436;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:16,29:44:58.99:545,0,59	0/0:17,0:17:34.54:0,35,371	0/0:27,0:17:44.90:0,45,510	0/0:22,0:14:37.30:0,37,420	1/1:7,21:32:23.68:375,24,0	1/1:10,0:38:21:185,21,0	1/1:14,0:35:3.01:49,3,0	0/1:22,23:45:11.26:908,0,11	0/1:36,0:35:50.30:148,0,50	1/1:5,32:37:96.33:1573,96,0	1/1:2,32:33:65.88:1080,66,0	0/0:42,0:42:99:0,105,1300	0/1:22,0:22:4.48:226,0,4	1/1:18,17:41:49.86:1236,50,0	1/1:10,27:37:42.13:665,42,0	1/1:20,8:33:19.59:704,20,0	1/1:5,12:19:23.96:358,24,0	1/1:2,20:21:45.15:737,45,0	1/1:18,11:27:42.93:843,43,0	1/1:15,14:28:50.59:809,51,0	1/1:14,17:30:12.04:197,12,0	1/1:9,26:35:7.75:650,8,0	0/0:27,0:27:72.21:0,72,879	0/0:36,0:37:33.78:0,34,916	1/1:7,22:29:35.86:590,36,0	1/1:9,18:27:54.18:884,54,0	1/1:12,26:38:51.10:753,51,0	1/1:12,7:19:39.10:610,39,0
chr10	41001976	.	AT	A	5334.96	PASS	AB=0.563;AC=22;AF=0.393;AN=56;BaseQRankSum=-1.191;DP=603;FS=4.371;HRun=10;HaplotypeScore=80.3033;InbreedingCoeff=0.8606;MQ=89.76;MQ0=0;MQRankSum=-0.736;QD=20.44;ReadPosRankSum=2.721;VQSLOD=5.8967;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,1:32:62.74:0,63,906	0/0:1,0:13:34.09:0,34,170	0/0:33,1:34:24.20:0,24,522	0/0:20,0:19:36.91:0,37,362	0/0:3,0:28:74.45:0,74,421	0/0:2,0:12:22.73:0,23,114	0/0:3,0:19:37.40:0,37,185	1/1:6,27:34:82.97:700,83,0	0/0:13,0:13:33.08:0,33,358	1/1:2,20:22:56.26:478,56,0	1/1:2,18:20:50.97:443,51,0	0/0:21,1:22:25.08:0,25,505	0/0:25,0:25:75.18:0,75,814	0/0:3,0:16:40.20:0,40,243	1/1:3,24:27:65.98:573,66,0	0/0:3,0:22:51.43:0,51,274	0/0:5,0:21:48.02:0,48,260	1/1:1,18:19:53.95:462,54,0	1/1:4,19:23:59.93:509,60,0	1/1:3,29:32:44.73:610,45,0	0/1:4,12:16:19.62:201,0,20	0/0:20,0:20:57.14:0,57,616	0/0:22,0:21:60.14:0,60,648	0/0:21,0:22:59.93:0,60,603	1/1:3,17:20:48.87:418,49,0	1/1:2,16:18:44.98:391,45,0	0/1:4,16:20:7.93:317,0,8	1/1:1,9:10:26.99:234,27,0
chr10	41004016	.	GA	G	10274.41	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=9.216;DP=716;FS=0.583;HRun=2;HaplotypeScore=99.7041;InbreedingCoeff=0.9976;MQ=81.82;MQ0=0;MQRankSum=-2.894;QD=38.92;ReadPosRankSum=-0.061;VQSLOD=4.7088;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,155,2510	0/0:9,0:9:27.09:0,27,431	0/0:21,0:21:60.06:0,60,889	0/0:26,0:26:75.23:0,75,1125	0/0:33,0:33:99:0,99,1505	0/0:23,0:23:69.22:0,69,1063	0/0:19,0:19:57.19:0,57,911	1/1:0,25:25:75.20:980,75,0	0/0:23,0:23:69.20:0,69,1054	1/1:1,22:23:69.19:927,69,0	1/1:0,15:15:39.13:538,39,0	0/0:25,0:25:75.24:0,75,1170	0/0:26,0:26:78.25:0,78,1223	0/0:26,0:26:78.27:0,78,1245	1/1:0,21:21:57.19:797,57,0	0/0:31,0:31:93.28:0,93,1416	0/0:46,0:46:99:0,138,2177	1/1:0,17:17:45.15:629,45,0	1/1:0,23:23:69.21:940,69,0	1/1:0,29:29:81.27:1130,81,0	1/1:0,23:23:60.20:839,60,0	0/0:29,0:29:81.27:0,81,1267	0/0:34,0:34:99:0,102,1558	0/0:27,0:27:81.28:0,81,1294	1/1:0,25:25:72.24:1004,72,0	1/1:0,30:30:90.27:1232,90,0	1/1:0,28:28:75.25:1049,75,0	1/1:0,5:5:15.05:210,15,0
chr10	41004402	.	G	GGTGTGTGTGTGTGTGT	17504.38	PASS	AB=0.773;AC=43;AF=0.768;AN=56;BaseQRankSum=2.625;DP=737;FS=6.540;HRun=0;HaplotypeScore=326.0906;InbreedingCoeff=0.5631;MQ=57.91;MQ0=7;MQRankSum=-8.078;QD=29.22;ReadPosRankSum=-3.423;VQSLOD=2.4225;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:54,0:54:25.89:764,26,0	0/1:5,0:10:12.08:245,0,12	0/0:24,0:16:3.01:0,3,125	0/1:25,0:17:1.27:1,0,175	1/1:16,2:19:0.47:1,0,0	1/1:17,0:21:4.69:175,5,0	1/1:30,0:33:15.52:583,16,0	1/1:44,0:41:44.13:1479,44,0	1/1:19,0:26:21.07:532,21,0	1/1:29,0:27:38.72:2057,39,0	0/0:13,0:16:0.89:0,1,2	0/0:30,0:30:54.17:0,54,2128	0/1:14,0:30:15.52:627,0,16	1/1:27,0:31:20.50:1242,21,0	1/1:22,4:26:8.98:669,9,0	1/1:14,2:17:18.06:1252,18,0	1/1:26,0:26:20.94:1148,21,0	1/1:22,2:24:25.87:1573,26,0	1/1:23,0:21:20.28:808,20,0	1/1:20,0:20:4.27:157,4,0	1/1:36,0:36:11.97:134,12,0	1/1:17,0:17:13.91:567,14,0	0/0:18,0:20:30.09:0,30,1100	0/0:46,0:47:63.24:0,63,2897	1/1:22,0:22:8.92:446,9,0	1/1:23,3:26:39.13:2068,39,0	1/1:25,0:25:14.76:748,15,0	1/1:8,0:9:6.02:229,6,0
chr10	41006464	.	C	CGTT	17887.90	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=6.780;DP=831;FS=5.997;HRun=0;HaplotypeScore=130.1402;InbreedingCoeff=1.0000;MQ=90.45;MQ0=0;MQRankSum=-9.488;QD=57.52;ReadPosRankSum=4.219;VQSLOD=6.5854;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,27:32:81.28:1858,81,0	1/1:2,22:24:66.23:1520,66,0	0/0:33,0:33:82.43:0,82,1242	0/0:36,0:36:95.85:0,96,1498	1/1:3,28:31:69.24:1559,69,0	1/1:5,21:26:69.15:1491,69,0	1/1:7,21:28:69.24:1590,69,0	0/0:40,0:40:99:0,117,1913	1/1:2,20:23:66.19:1441,66,0	0/0:35,0:35:99:0,99,1654	0/0:18,0:18:54.18:0,54,916	0/0:28,0:28:84.29:0,84,1433	1/1:2,24:26:69.24:1589,69,0	1/1:2,22:24:63.17:1402,63,0	0/0:31,0:31:87.28:0,87,1450	1/1:2,27:29:78.27:1763,78,0	1/1:2,30:34:78.22:1749,78,0	0/0:16,0:16:42.10:0,42,684	0/0:19,0:19:51.14:0,51,811	0/0:38,0:38:99:0,114,1912	0/0:60,0:60:99:0,169,2860	1/1:4,28:34:90.18:1925,90,0	0/0:31,0:31:90.26:0,90,1502	0/0:33,0:33:70.27:0,70,1424	0/0:26,0:26:78.27:0,78,1326	0/0:28,0:28:81.28:0,81,1375	0/0:33,0:33:96.33:0,96,1621	0/0:15,0:15:45.15:0,45,765
chr10	41007540	.	G	GA	1054.19	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-8.228;DP=565;FS=11.687;HRun=9;HaplotypeScore=53.1061;InbreedingCoeff=0.9726;MQ=63.97;MQ0=1;MQRankSum=-0.237;QD=21.96;ReadPosRankSum=-0.052;VQSLOD=3.5204;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:86.95:0,87,755	0/0:8,0:8:21:0,21,182	0/0:11,0:10:11.98:0,12,103	0/0:16,0:14:20.43:0,20,223	0/0:25,0:25:62.98:0,63,546	1/1:3,24:27:63.17:697,63,0	1/1:3,17:21:44.95:479,45,0	0/0:32,0:31:44.55:0,45,598	0/0:24,0:24:65.97:0,66,570	0/0:22,0:22:56.95:0,57,489	0/0:16,0:16:44.99:0,45,391	0/0:22,0:22:59.96:0,60,517	0/0:14,0:14:41.99:0,42,365	0/0:10,0:10:26.99:0,27,234	0/0:22,0:22:50.97:0,51,443	0/0:25,0:25:68.94:0,69,587	0/0:19,0:19:50.95:0,51,435	0/0:17,0:17:47.99:0,48,416	0/0:22,0:23:59.01:0,59,498	0/0:22,1:23:17.77:0,18,383	0/0:18,0:18:41.99:0,42,365	0/0:17,0:17:47.97:0,48,413	0/0:24,0:24:68.94:0,69,590	0/0:21,1:22:29.79:0,30,485	0/0:18,0:18:44.99:0,45,391	0/0:25,0:25:59.96:0,60,521	0/0:17,0:17:50.99:0,51,443	0/0:9,0:9:20.99:0,21,182
chr10	41007858	.	ATG	A	1611.68	PASS	AB=0.933;AC=16;AF=0.286;AN=56;BaseQRankSum=15.771;DP=707;FS=10.209;HRun=0;HaplotypeScore=150.9346;InbreedingCoeff=0.8086;MQ=55.49;MQ0=6;MQRankSum=-8.690;QD=8.35;ReadPosRankSum=0.906;VQSLOD=2.9556;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:3.69:0,4,935	0/0:18,0:18:54.17:0,54,972	0/0:18,0:9:27.09:0,27,451	0/1:14,0:11:1.03:1,0,308	1/1:13,22:35:15.58:319,16,0	1/1:3,0:22:35.82:269,36,0	1/1:1,2:14:8.95:65,9,0	0/0:40,0:40:99:0,111,1849	1/1:11,10:21:7.93:211,8,0	0/0:34,0:34:99:0,102,1915	0/0:26,0:26:78.24:0,78,1438	0/0:27,0:27:78.27:0,78,1486	1/1:8,17:25:40.61:360,41,0	1/1:5,14:19:15.77:228,16,0	0/0:25,0:25:75.24:0,75,1396	1/1:11,16:27:27.62:313,28,0	0/1:11,2:13:18.16:37,0,18	0/0:27,0:27:81.21:0,81,1388	0/0:15,0:15:45.15:0,45,801	0/0:38,0:38:99:0,114,1879	0/0:34,0:34:99:0,99,1800	0/0:27,0:27:81.21:0,81,1449	0/0:28,0:28:84.26:0,84,1504	0/0:21,0:21:51.17:0,51,896	0/0:34,0:34:99:0,99,1796	0/0:28,0:28:84.27:0,84,1493	0/0:32,0:30:93.32:0,93,1761	0/0:15,0:15:45.15:0,45,838
chr10	41007862	.	ATG	A	1515.77	PASS	AB=0.900;AC=16;AF=0.286;AN=56;BaseQRankSum=15.587;DP=720;FS=9.430;HRun=0;HaplotypeScore=155.6388;InbreedingCoeff=0.7896;MQ=54.64;MQ0=6;MQRankSum=-10.914;QD=7.98;ReadPosRankSum=1.167;VQSLOD=3.0744;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:27:51.49:0,51,1051	0/0:17,0:17:51.17:0,51,952	0/0:21,0:10:29.96:0,30,443	0/1:13,1:10:13.92:14,0,306	1/1:12,22:34:7.64:273,8,0	1/1:23,0:20:35.28:224,35,0	1/1:14,0:13:8.77:51,9,0	0/0:40,0:40:99:0,108,1895	1/1:11,10:21:9:214,9,0	0/0:36,0:36:99:0,108,2042	0/0:26,0:26:78.27:0,78,1505	0/0:28,0:28:84.26:0,84,1539	1/1:9,17:26:39.15:359,39,0	1/1:4,14:18:12.88:208,13,0	0/0:25,0:25:75.24:0,75,1398	1/1:11,16:27:27.69:313,28,0	0/1:11,2:13:15.89:54,0,16	0/0:28,0:28:84.18:0,84,1512	0/0:17,0:17:51.17:0,51,920	0/0:39,0:39:99:0,117,2036	0/0:36,0:36:99:0,105,1960	0/0:28,0:28:81.28:0,81,1554	0/0:29,0:29:87.27:0,87,1565	0/0:21,0:21:48.13:0,48,844	0/0:36,0:36:99:0,102,1906	0/0:28,0:28:84.19:0,84,1504	0/0:33,0:31:99:0,99,1863	0/0:15,0:15:45.15:0,45,869
chr10	41007895	.	A	AATGT	3623.52	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-1.478;DP=793;FS=0.486;HRun=0;HaplotypeScore=193.5575;InbreedingCoeff=0.9567;MQ=58.05;MQ0=3;MQRankSum=-2.610;QD=48.97;ReadPosRankSum=1.336;VQSLOD=4.0117;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:16,17:33:69.43:1251,69,0	1/1:1,10:11:27.09:679,27,0	0/0:38,0:25:54.08:0,54,909	0/0:20,0:13:6.48:0,6,304	0/0:43,0:43:59.21:0,59,649	0/0:28,0:26:33.08:0,33,343	0/0:12,0:12:15.04:0,15,163	0/0:32,0:32:63.18:0,63,951	0/0:30,0:30:57.08:0,57,578	0/0:41,0:41:93.31:0,93,1559	0/0:32,0:32:75.07:0,75,1155	0/0:29,0:29:72.15:0,72,1114	0/0:27,0:27:39.09:0,39,413	0/0:25,0:25:19.08:0,19,329	0/0:33,0:33:84.26:0,84,1330	0/0:28,0:28:36.06:0,36,378	0/0:19,0:19:29.50:0,30,322	0/0:25,0:25:75.21:0,75,1219	0/0:17,0:16:21.06:0,21,311	0/0:37,0:37:99:0,99,1594	0/0:42,0:42:99:0,117,1852	1/1:7,23:30:81.05:1693,81,0	0/0:30,0:30:69.21:0,69,1108	0/0:29,0:29:78.23:0,78,1250	0/0:31,0:31:84.29:0,84,1422	0/0:29,0:29:72.24:0,72,1205	0/0:31,0:29:75.22:0,75,1227	0/0:11,0:11:27.08:0,27,432
chr10	41007944	.	GTA	G	1590.06	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.568;DP=763;FS=5.555;HRun=0;HaplotypeScore=125.1226;InbreedingCoeff=0.9936;MQ=64.07;MQ0=1;MQRankSum=0.588;QD=22.72;ReadPosRankSum=-0.043;VQSLOD=4.0080;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,30:39:78.23:998,78,0	0/0:9,0:9:21.07:0,21,353	0/0:20,0:15:35.63:0,36,481	0/0:23,0:19:35.58:0,36,585	0/0:33,0:33:81.28:0,81,1378	0/0:24,0:23:48.16:0,48,816	0/0:22,0:22:54.04:0,54,856	0/0:40,0:40:99:0,99,1587	0/0:27,0:27:72.25:0,72,1224	0/0:41,0:41:99:0,102,1736	0/0:26,0:26:72.23:0,72,1194	0/0:36,0:36:90.31:0,90,1527	0/0:28,0:28:72.23:0,72,1197	0/0:20,0:20:60.21:0,60,1020	0/0:31,0:31:90.29:0,90,1505	0/0:22,0:22:57.18:0,57,940	0/0:22,0:22:57.20:0,57,966	0/0:25,0:25:69.22:0,69,1135	0/0:16,0:16:42.13:0,42,681	0/0:43,0:43:99:0,108,1829	0/0:40,0:40:99:0,102,1730	1/1:7,24:31:57.16:714,57,0	0/0:22,0:22:60.19:0,60,993	0/0:37,0:37:99:0,102,1675	0/0:33,0:33:81.28:0,81,1377	0/0:25,0:25:66.23:0,66,1123	0/0:22,0:21:63.22:0,63,1069	0/0:6,0:6:18.06:0,18,306
chr10	41008166	.	T	TC	3723.89	PASS	AB=0.522;AC=7;AF=0.125;AN=56;BaseQRankSum=13.487;DP=765;FS=5.955;HRun=1;HaplotypeScore=81.5950;InbreedingCoeff=0.8745;MQ=84.84;MQ0=0;MQRankSum=-2.797;QD=34.80;ReadPosRankSum=2.100;VQSLOD=3.6466;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,108,1369	0/0:9,0:9:24.08:0,24,311	0/0:26,0:26:72.20:0,72,893	0/0:24,0:24:63.02:0,63,723	1/1:2,33:35:84.27:1193,84,0	0/0:19,0:20:57.17:0,57,722	0/0:19,0:18:57.16:0,57,712	0/0:29,0:29:78.25:0,78,1001	0/0:22,0:22:66.19:0,66,828	0/0:37,0:37:99:0,105,1351	0/0:31,0:31:93.30:0,93,1207	0/0:26,0:26:75.24:0,75,973	0/0:29,0:29:84.23:0,84,1059	1/1:1,17:18:45.15:651,45,0	0/0:36,0:36:99:0,105,1349	0/1:2,22:24:5.63:881,0,6	1/1:4,26:30:69.23:999,69,0	0/0:23,0:23:69.11:0,69,825	0/0:18,0:18:54.18:0,54,700	0/0:41,0:41:99:0,117,1490	0/0:26,0:26:78.19:0,78,953	0/0:26,0:26:75.20:0,75,953	0/0:37,0:37:99:0,105,1349	0/0:26,0:26:69.22:0,69,895	0/0:24,0:24:69.22:0,69,894	0/0:33,0:33:99:0,99,1265	0/0:31,0:31:87.26:0,87,1097	0/0:29,0:29:87.28:0,87,1129
chr10	41008393	.	GGTGTGTGTGT	G	2998.82	PASS	AB=0.875;AC=19;AF=0.339;AN=56;BaseQRankSum=5.389;DP=650;FS=5.084;HRun=0;HaplotypeScore=217.5577;InbreedingCoeff=0.3132;MQ=55.55;MQ0=18;MQRankSum=-7.669;QD=9.93;ReadPosRankSum=0.464;VQSLOD=1.7606;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:34:8.39:0,8,125	0/0:6,0:8:11.30:0,11,134	0/0:31,0:23:9.03:0,9,185	0/0:25,0:20:4.83:0,5,51	0/0:21,0:21:27.09:0,27,762	0/0:6,0:13:11.16:0,11,278	0/0:8,0:27:45.14:0,45,805	0/1:19,0:16:10.77:106,0,11	1/1:16,10:29:21.07:601,21,0	0/1:19,1:22:99:104,0,108	0/1:13,1:17:3.64:4,0,18	0/0:23,0:22:33.11:0,33,1052	1/1:14,13:27:35.74:962,36,0	0/0:26,0:26:36.08:0,36,1261	0/1:11,1:21:60.01:154,0,60	0/0:19,0:20:33.11:0,33,1079	0/0:31,0:34:67.78:0,68,2100	0/1:23,0:22:99:113,0,159	1/1:20,2:19:5.49:252,5,0	1/1:20,0:20:5.96:96,6,0	0/1:45,1:47:15.11:15,0,65	0/0:10,1:16:5.61:0,6,87	0/0:22,0:23:27.09:0,27,840	0/0:28,0:29:51.80:0,52,1902	0/0:12,1:14:2.99:0,3,45	0/1:21,5:25:24.55:492,0,25	1/1:16,0:16:9.02:185,9,0	1/1:8,1:8:3.01:90,3,0
chr10	41008422	.	GTGTGTGTGTGTGCAGGTATGTGTGTGTA	G	4285.34	PASS	AB=1.000;AC=18;AF=0.321;AN=56;BaseQRankSum=6.275;DP=655;FS=3.009;HRun=0;HaplotypeScore=375.6458;InbreedingCoeff=0.1236;MQ=44.53;MQ0=29;MQRankSum=-8.836;QD=14.38;ReadPosRankSum=1.871;VQSLOD=2.6064;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:36,0:34:16.82:17,0,1915	0/0:6,0:6:7.98:0,8,122	0/0:27,0:7:15.05:0,15,331	0/0:30,0:9:16.48:0,16,163	0/0:20,0:20:42.14:0,42,1927	0/0:20,0:20:34.18:0,34,1874	0/0:36,0:35:84.21:0,84,2524	0/1:14,0:12:35.59:177,0,36	0/1:23,0:24:99:472,0,515	0/1:20,0:20:92.79:515,0,93	0/1:16,0:16:4:4,0,18	0/0:22,0:21:54.19:0,54,2753	0/1:28,0:28:99:434,0,1278	0/0:28,0:28:57.15:0,57,3174	0/1:22,0:20:89.84:360,0,90	0/0:22,0:22:54.19:0,54,2555	0/0:44,0:43:99:0,112,5560	0/1:16,0:16:99:291,0,217	1/1:11,0:9:11.51:453,12,0	1/1:8,11:18:6.01:97,6,0	0/1:46,0:45:13.68:14,0,67	0/0:26,0:26:33.11:0,33,1977	0/0:21,0:21:45.15:0,45,2162	0/0:41,0:41:78.24:0,78,5964	0/0:14,0:14:2.87:0,3,44	0/1:25,0:21:13.53:1085,0,14	1/1:4,5:8:9.02:185,9,0	1/1:11,0:10:8.97:181,9,0
chr10	41008424	.	G	GCAGGTA	1606.52	PASS	AB=0.990;AC=14;AF=0.250;AN=56;BaseQRankSum=6.349;DP=625;FS=8.717;HRun=0;HaplotypeScore=199.0053;InbreedingCoeff=0.0049;MQ=44.74;MQ0=27;MQRankSum=-8.613;QD=7.47;ReadPosRankSum=2.405;VQSLOD=1.9310;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:35:21.63:0,22,705	0/0:5,0:5:11.99:0,12,181	0/0:26,0:6:18.06:0,18,323	0/0:31,0:10:20.28:0,20,287	0/0:18,0:18:42.14:0,42,1012	0/0:20,0:20:35.73:0,36,767	0/0:36,0:35:87.21:0,87,1650	0/1:14,0:12:97.17:97,0,337	0/1:23,0:23:99:263,0,250	0/1:17,0:17:53.09:53,0,302	0/1:16,0:16:0.77:1,0,31	0/0:21,0:20:54.16:0,54,1303	0/1:26,0:26:99:570,0,430	0/0:27,0:27:57.12:0,57,1207	0/0:22,0:20:30.42:0,30,332	0/0:23,0:23:55.06:0,55,1250	0/0:43,0:42:99:0,105,2355	0/1:14,0:14:91.92:92,0,269	0/1:10,0:8:99:180,0,100	1/1:17,0:16:6.02:97,6,0	0/1:34,4:37:12.10:12,0,76	0/0:28,0:28:35.96:0,36,763	0/0:20,0:20:45.15:0,45,1070	0/0:40,0:40:64.27:0,64,2328	0/0:13,0:13:2.40:0,2,44	0/1:21,0:17:62.67:300,0,63	1/1:8,0:7:8.75:70,9,0	0/1:11,0:10:25.98:26,0,57
chr10	41008434	.	GCAGGTA	G	1283.15	PASS	AB=0.871;AC=15;AF=0.268;AN=56;BaseQRankSum=8.176;DP=566;FS=10.572;HRun=0;HaplotypeScore=173.0633;InbreedingCoeff=-0.0375;MQ=45.42;MQ0=20;MQRankSum=-7.916;QD=6.11;ReadPosRankSum=0.258;VQSLOD=2.0043;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:3.26:0,3,1059	0/1:2,0:2:0.49:44,0,0	0/0:25,0:6:18.04:0,18,458	0/0:34,0:13:34.85:0,35,715	0/0:18,0:18:23.11:0,23,751	0/0:20,0:20:38.15:0,38,1138	0/0:36,0:35:82.50:0,83,1980	0/1:10,0:8:11.21:11,0,200	0/1:23,0:23:31.39:31,0,633	0/1:10,2:12:99:357,0,112	0/1:6,6:12:0.01:0,0,0	0/0:17,0:16:45.14:0,45,1395	0/1:27,0:27:53.14:53,0,1002	0/0:21,1:22:22.07:0,22,1707	0/1:14,6:18:49.27:49,0,94	0/0:20,0:21:23.14:0,23,1337	0/0:35,0:35:84.24:0,84,2521	0/1:9,2:11:64.36:212,0,64	0/1:6,2:6:99:137,0,119	1/1:14,0:14:0.47:1,0,0	0/1:31,1:33:0.33:0,0,1	0/0:27,0:27:35.92:0,36,998	0/0:19,0:19:38.61:0,39,1231	0/0:39,0:39:94.51:0,95,2934	0/1:7,5:12:0.10:0,0,0	0/1:13,6:16:99:475,0,109	0/0:6,0:6:6:0,6,54	0/1:6,0:6:24.68:49,0,25
chr10	41008455	.	GGTAT	G	238.01	PASS	AB=0.984;AC=9;AF=0.167;AN=54;BaseQRankSum=4.964;DP=606;FS=0.000;HRun=0;HaplotypeScore=167.6347;InbreedingCoeff=-0.0534;MQ=47.49;MQ0=4;MQRankSum=-5.864;QD=2.09;ReadPosRankSum=-2.165;VQSLOD=2.3861;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:56.48:0,56,1437	1/1:1,0:1:2.74:12,3,0	0/0:42,0:18:47.95:0,48,928	0/0:53,0:21:56.58:0,57,1156	0/0:17,0:17:22.20:0,22,654	0/0:24,0:24:60.20:0,60,1513	0/0:39,0:38:90.19:0,90,2171	0/1:16,0:16:20.88:21,0,819	0/0:20,0:20:29.13:0,29,675	0/1:16,0:16:91.31:91,0,811	0/0:11,0:11:2.92:0,3,82	0/0:20,0:20:54.19:0,54,1453	0/0:25,0:25:54.51:0,55,1228	0/0:22,0:22:57.16:0,57,1324	0/1:20,0:19:73.28:73,0,201	0/0:16,0:16:35.65:0,36,903	0/1:28,4:32:46.57:47,0,1486	0/1:9,0:9:35.71:40,0,36	0/0:7,0:6:15.05:0,15,305	0/0:12,0:12:3.01:0,3,57	0/0:42,0:41:32.69:0,33,802	0/0:23,0:23:35.80:0,36,950	0/0:18,0:18:36.12:0,36,898	0/0:45,1:46:99:0,122,3112	0/0:11,0:11:5.74:0,6,115	0/1:15,0:15:59.15:59,0,555	./.	0/1:5,0:5:28.76:29,0,80
chr10	41008456	.	GTA	G	106.30	PASS	AB=0.877;AC=8;AF=0.148;AN=54;BaseQRankSum=5.688;DP=613;FS=0.817;HRun=0;HaplotypeScore=154.9057;InbreedingCoeff=-0.0320;MQ=47.60;MQ0=3;MQRankSum=-5.900;QD=1.28;ReadPosRankSum=-2.257;VQSLOD=2.1898;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,1:37:15.02:0,15,992	1/1:1,0:1:2.74:12,3,0	0/0:42,0:20:43.53:0,44,702	0/0:53,0:23:59.62:0,60,961	0/0:18,0:18:23.03:0,23,462	0/0:25,0:25:63.22:0,63,1193	0/0:38,0:37:90.17:0,90,1561	0/1:17,0:17:25.24:25,0,643	0/0:20,0:20:29.13:0,29,519	0/1:13,3:16:57.35:57,0,605	0/0:9,2:11:2.89:0,3,58	0/0:21,0:21:57.19:0,57,1063	0/0:25,0:25:52.89:0,53,952	0/0:22,0:22:57.17:0,57,1022	0/1:17,3:19:47.39:47,0,205	0/0:16,0:16:35.50:0,36,686	0/0:32,0:32:31.76:0,32,1042	0/1:8,1:9:41.08:41,0,46	0/0:7,0:6:0.07:0,0,268	0/0:12,0:12:3.01:0,3,58	0/0:39,3:41:32.65:0,33,631	0/0:25,0:25:35.86:0,36,660	0/0:18,0:18:35.99:0,36,647	0/0:47,0:47:99:0,127,2275	0/0:9,2:11:5.73:0,6,112	0/1:14,1:15:35.22:35,0,507	./.	0/1:3,2:5:15.53:16,0,78
chr10	41008507	.	G	GGTGT	2664.57	PASS	AB=0.977;AC=10;AF=0.179;AN=56;BaseQRankSum=9.811;DP=760;FS=1.228;HRun=0;HaplotypeScore=173.3102;InbreedingCoeff=0.7815;MQ=54.51;MQ0=11;MQRankSum=-7.037;QD=24.90;ReadPosRankSum=-1.903;VQSLOD=3.3351;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:7.27:0,7,104	0/1:1,0:1:0:0,0,0	0/0:41,0:13:19.88:0,20,296	0/0:40,0:14:13.02:0,13,241	1/1:7,14:22:18.63:398,19,0	0/0:22,0:23:54.18:0,54,894	0/0:39,0:39:81.24:0,81,1331	0/0:36,0:36:41.55:0,42,1027	0/0:19,0:19:30.09:0,30,488	0/0:30,0:30:45.09:0,45,1014	0/0:18,0:18:22.96:0,23,410	0/0:30,0:30:78.27:0,78,1330	0/0:23,0:23:42.02:0,42,592	1/1:11,14:26:39.09:881,39,0	0/0:23,0:23:51.17:0,51,876	1/1:7,12:20:45.15:1063,45,0	1/1:8,9:17:18.06:448,18,0	0/1:20,0:19:36.33:36,0,613	0/0:28,0:27:54.16:0,54,856	0/0:17,0:17:30.10:0,30,515	0/0:83,0:82:99:0,144,2418	0/0:21,0:21:5.75:0,6,99	0/0:21,0:22:39.09:0,39,612	0/0:54,0:54:96.11:0,96,1551	0/0:20,0:20:33.11:0,33,566	0/0:25,0:24:54.15:0,54,863	0/0:10,0:12:24:0,24,355	0/0:6,0:6:12.04:0,12,206
chr10	41008521	.	C	CA	574.31	PASS	AB=0.692;AC=7;AF=0.125;AN=56;BaseQRankSum=10.073;DP=716;FS=1.280;HRun=1;HaplotypeScore=135.1671;InbreedingCoeff=0.7000;MQ=53.63;MQ0=13;MQRankSum=-6.796;QD=6.92;ReadPosRankSum=-2.861;VQSLOD=-0.3918;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:7.21:0,7,47	0/0:1,0:1:0:0,0,0	0/0:36,0:12:33.08:0,33,374	0/0:28,0:11:1.99:0,2,201	1/1:8,13:21:13.93:72,14,0	0/0:21,0:21:54.10:0,54,673	0/0:36,0:36:99:0,102,1265	0/0:31,0:31:86.60:0,87,1037	0/0:21,0:18:39.06:0,39,425	0/0:31,0:31:90.08:0,90,1127	0/0:20,0:20:42.14:0,42,544	0/0:34,0:34:93.28:0,93,1185	0/0:21,0:20:44.92:0,45,460	1/1:7,16:24:33.70:221,34,0	0/0:20,0:20:54:0,54,656	1/1:8,12:20:44.01:309,44,0	0/1:10,8:18:32.43:116,0,32	0/0:23,0:21:47.29:0,47,615	0/0:22,0:20:60.17:0,60,745	0/0:18,0:18:45.10:0,45,560	0/0:93,0:93:99:0,177,2237	0/0:19,0:19:4.25:0,4,30	0/0:22,0:22:45.01:0,45,535	0/0:37,0:37:99:0,108,1346	0/0:20,0:20:44.78:0,45,580	0/0:26,0:24:62.13:0,62,789	0/0:14,0:14:33.04:0,33,387	0/0:7,0:7:15.05:0,15,195
chr10	41008525	.	G	GT	950.80	PASS	AB=0.852;AC=8;AF=0.143;AN=56;BaseQRankSum=9.595;DP=715;FS=6.482;HRun=0;HaplotypeScore=136.0532;InbreedingCoeff=0.6964;MQ=53.67;MQ0=11;MQRankSum=-6.620;QD=9.70;ReadPosRankSum=-2.382;VQSLOD=3.0647;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:8.06:0,8,44	0/0:1,0:1:0:0,0,0	0/0:36,0:12:35.98:0,36,415	0/0:28,0:12:2.03:0,2,240	1/1:11,11:22:15.58:122,16,0	0/0:19,0:19:57.15:0,57,758	0/0:35,0:35:99:0,102,1364	0/0:29,0:29:70.89:0,71,1005	0/0:5,0:18:39.60:0,40,246	0/0:32,0:32:85.70:0,86,1170	0/0:21,0:21:45.11:0,45,600	0/0:34,0:34:76.35:0,76,1303	0/0:3,0:20:44.16:0,44,285	1/1:2,19:21:37.93:405,38,0	0/0:22,0:22:54.08:0,54,709	1/1:6,13:19:12.78:383,13,0	0/1:11,8:19:21.71:182,0,22	0/0:25,0:23:9.24:0,9,642	0/0:21,0:19:31.63:0,32,653	0/0:19,0:19:45.11:0,45,601	0/0:91,0:92:99:0,186,2496	0/1:17,0:17:0:0,0,0	0/0:20,0:21:45.08:0,45,572	0/0:38,0:38:99:0,108,1379	0/0:21,0:21:51.19:0,51,660	0/0:28,0:26:68.05:0,68,873	0/0:14,0:14:33.07:0,33,433	0/0:7,0:7:15.05:0,15,210
chr10	41008609	.	G	GGT	13018.54	PASS	AB=0.681;AC=36;AF=0.643;AN=56;BaseQRankSum=-7.587;DP=727;FS=4.132;HRun=0;HaplotypeScore=139.9504;InbreedingCoeff=0.8376;MQ=48.54;MQ0=18;MQRankSum=0.811;QD=27.47;ReadPosRankSum=0.460;VQSLOD=6.2295;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,36:46:78.13:1287,78,0	1/1:0,5:5:12.04:198,12,0	0/0:37,0:10:5.97:0,6,74	0/0:47,0:18:18.05:0,18,214	0/0:21,0:21:23.92:0,24,300	1/1:2,22:22:51.09:841,51,0	1/1:10,22:33:25.69:953,26,0	1/1:9,18:28:60.15:937,60,0	1/1:5,11:14:30.10:494,30,0	1/1:11,14:25:34.25:703,34,0	1/1:12,16:29:33.11:530,33,0	0/0:20,0:20:48.01:0,48,585	1/1:9,14:22:45.15:733,45,0	0/0:21,0:21:42.13:0,42,520	1/1:7,12:19:6.43:314,6,0	0/0:19,0:19:33.09:0,33,411	0/0:25,0:25:57.12:0,57,678	1/1:3,13:18:42.14:690,42,0	0/1:11,5:15:2.95:322,0,3	0/1:7,14:21:8.34:506,0,8	1/1:32,38:65:99:1962,123,0	1/1:9,13:22:38.16:592,38,0	0/0:17,0:16:27.08:0,27,329	0/0:43,0:43:99:0,102,1275	1/1:7,11:19:33.11:517,33,0	1/1:16,19:34:59.69:946,60,0	1/1:5,7:12:15.05:247,15,0	1/1:1,5:6:15.05:247,15,0
chr10	41008635	.	G	GGT	3505.65	PASS	AB=0.887;AC=32;AF=0.667;AN=48;BaseQRankSum=0.722;DP=753;FS=5.401;HRun=0;HaplotypeScore=174.1206;InbreedingCoeff=0.2616;MQ=44.53;MQ0=31;MQRankSum=-1.314;QD=6.61;ReadPosRankSum=-5.107;VQSLOD=2.0682;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:49,0:52:0.50:225,0,0	./.	./.	./.	1/1:10,1:21:7.08:54,7,0	0/0:22,0:22:21.04:0,21,224	0/1:33,0:37:3.86:4,0,314	1/1:30,0:28:21:227,21,0	1/1:14,0:15:6.31:83,6,0	1/1:19,5:23:12.06:304,12,0	0/1:18,3:20:36.63:37,0,38	0/0:18,0:19:35.79:0,36,374	1/1:23,0:24:15.88:138,16,0	1/1:22,1:23:5.97:49,6,0	1/1:9,10:19:24.08:337,24,0	1/1:8,1:18:9.01:98,9,0	1/1:18,2:22:20.97:209,21,0	0/1:17,1:19:47.17:69,0,47	0/1:20,4:17:97.94:157,0,98	0/1:19,6:24:9.46:215,0,9	0/1:61,6:61:18.43:484,0,18	1/1:11,0:17:10.98:82,11,0	0/0:14,0:15:20.70:0,21,179	0/0:40,0:48:68.41:0,68,644	0/1:13,4:18:10.74:196,0,11	1/1:29,6:32:22.96:404,23,0	./.	1/1:7,4:11:9.50:137,10,0
chr10	41009550	.	AATGCTGGC	A	6872.95	PASS	AB=0.537;AC=7;AF=0.125;AN=56;BaseQRankSum=14.735;DP=893;FS=2.472;HRun=0;HaplotypeScore=227.3488;InbreedingCoeff=0.8143;MQ=83.28;MQ0=0;MQRankSum=-14.622;QD=59.76;ReadPosRankSum=1.614;VQSLOD=4.9610;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:69,0:69:99:0,208,8734	0/0:17,0:17:51.18:0,51,2269	0/0:34,0:34:99:0,99,3745	0/0:21,0:21:51.17:0,51,2026	1/1:0,20:20:42.06:1072,42,0	0/0:28,0:28:84.27:0,84,3612	0/0:44,0:44:99:0,132,5715	0/0:33,0:33:93.32:0,93,3857	0/0:32,1:33:7.24:0,7,3799	0/0:39,0:39:99:0,117,5007	0/0:17,0:17:51.18:0,51,2275	0/0:43,0:43:99:0,126,5497	0/0:36,0:36:99:0,105,4570	1/1:5,21:26:60.21:1721,60,0	0/0:45,0:45:99:0,132,5759	0/1:4,25:29:61.94:1907,0,62	1/1:7,33:40:78.70:2173,79,0	0/0:25,0:25:69.24:0,69,2954	0/0:29,0:29:84.27:0,84,3389	0/0:26,0:26:75.26:0,75,3282	0/0:64,0:64:99:0,193,8368	0/0:32,0:32:93.32:0,93,4039	0/0:19,0:19:54.19:0,54,2353	0/0:31,0:31:87.30:0,87,3796	0/0:24,0:24:69.24:0,69,3083	0/0:30,0:30:90.31:0,90,3938	0/0:28,0:28:84.29:0,84,3650	0/0:11,0:11:33.11:0,33,1476
chr10	41009807	.	GC	G	9711.68	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=19.580;DP=721;FS=2.397;HRun=2;HaplotypeScore=95.3380;InbreedingCoeff=0.9997;MQ=91.30;MQ0=0;MQRankSum=-7.750;QD=34.68;ReadPosRankSum=6.605;VQSLOD=4.5857;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,53:55:99:1870,144,0	1/1:1,12:13:39.13:505,39,0	0/0:23,0:23:57.16:0,57,819	0/0:35,0:35:99:0,102,1454	1/1:1,18:19:48.15:618,48,0	1/1:0,20:20:57.19:740,57,0	1/1:2,29:31:75.24:974,75,0	0/0:38,0:38:99:0,108,1565	1/1:0,31:31:87.28:1129,87,0	0/0:30,0:29:84.27:0,84,1221	0/0:17,0:17:48.15:0,48,691	0/0:20,0:20:54.17:0,54,791	1/1:0,20:20:51.17:662,51,0	1/1:0,26:26:69.22:895,69,0	0/0:33,0:33:96.33:0,96,1438	1/1:0,23:23:63.20:817,63,0	1/1:2,20:22:60.16:761,60,0	0/0:18,0:18:54.18:0,54,809	0/0:35,0:35:99:0,105,1512	0/0:17,0:17:48.16:0,48,718	0/0:52,0:52:99:0,153,2208	1/1:0,20:20:57.19:740,57,0	0/0:16,0:16:48.14:0,48,666	0/0:21,0:21:60.20:0,60,899	0/0:28,0:28:78.25:0,78,1145	0/0:18,0:18:54.18:0,54,806	0/0:32,0:31:93.28:0,93,1338	0/0:8,0:8:24.08:0,24,360
chr10	41009970	.	TACACACACACACACACACACACAC	T	1972.95	PASS	AB=0.909;AC=15;AF=0.326;AN=46;BaseQRankSum=5.449;DP=428;FS=12.406;HRun=0;HaplotypeScore=223.9706;InbreedingCoeff=0.6295;MQ=75.31;MQ0=8;MQRankSum=-3.044;QD=14.95;ReadPosRankSum=-1.177;VQSLOD=1.1940;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:21.07:0,21,1661	0/0:3,0:5:1.80:0,2,31	./.	./.	0/0:12,0:12:18.06:0,18,1435	0/0:10,0:10:9.92:0,10,573	0/0:18,0:18:21.01:0,21,721	1/1:15,2:16:6.01:85,6,0	0/0:14,0:14:15.05:0,15,1347	0/0:15,0:14:3.01:0,3,137	1/1:7,1:8:3.01:187,3,0	0/0:14,0:14:24.08:0,24,1866	0/0:10,0:9:9.50:0,10,943	0/0:9,0:8:6.02:0,6,287	1/1:11,7:17:9.03:560,9,0	0/0:10,0:11:21.07:0,21,1153	0/0:21,0:26:32.78:0,33,2512	0/1:9,1:8:17.78:179,0,18	1/1:14,3:17:9.48:398,9,0	./.	1/1:34,0:34:2.99:26,3,0	0/0:15,0:15:21.07:0,21,1188	0/0:12,0:12:11.28:0,11,856	0/0:21,0:22:27.09:0,27,2421	1/1:11,4:15:6.78:320,7,0	./.	1/1:8,5:13:5.78:372,6,0	./.
chr10	41010738	.	A	AG	4101.65	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-4.641;DP=683;FS=0.814;HRun=4;HaplotypeScore=68.5846;InbreedingCoeff=0.9950;MQ=84.30;MQ0=0;MQRankSum=-0.748;QD=36.62;ReadPosRankSum=1.052;VQSLOD=3.8535;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,114,1293	0/0:10,0:10:30.07:0,30,331	0/0:25,0:25:66.15:0,66,726	0/0:17,0:17:37.65:0,38,437	1/1:0,27:27:72.24:984,72,0	0/0:29,0:29:78.22:0,78,885	0/0:29,0:29:87.25:0,87,986	0/0:30,0:30:75.19:0,75,825	0/0:25,0:25:72.17:0,72,796	0/0:34,0:34:99:0,102,1137	0/0:12,0:12:30.09:0,30,340	0/0:26,0:26:69.17:0,69,765	0/0:21,0:21:63.09:0,63,689	1/1:1,23:24:60.20:820,60,0	0/0:30,0:30:84.22:0,84,942	1/1:2,25:27:72.24:985,72,0	1/1:1,33:34:96.32:1313,96,0	0/0:19,0:19:57.13:0,57,626	0/0:9,0:9:27.08:0,27,306	0/0:28,0:28:78.19:0,78,865	0/0:32,1:33:83:0,83,1032	0/0:17,0:17:51.15:0,51,578	0/0:19,0:19:57.12:0,57,617	0/0:22,0:22:66.13:0,66,724	0/0:31,0:31:93.25:0,93,1046	0/0:34,0:34:96.25:0,96,1073	0/0:27,0:27:75.19:0,75,835	0/0:5,0:5:15.04:0,15,170
chr10	41011053	.	G	GTT	4744.56	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-0.475;DP=677;FS=2.849;HRun=8;HaplotypeScore=83.2383;InbreedingCoeff=0.9999;MQ=69.95;MQ0=0;MQRankSum=-0.800;QD=24.21;ReadPosRankSum=3.810;VQSLOD=4.2396;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,147,1605	0/0:13,0:13:36.10:0,36,401	0/0:28,0:26:57.55:0,58,609	0/0:20,0:20:48.10:0,48,521	1/1:3,27:30:81.23:1231,81,0	1/1:1,0:27:57.39:197,57,0	1/1:4,2:19:38.46:207,38,0	0/0:21,0:21:39.08:0,39,434	1/1:1,0:25:52.15:180,52,0	0/0:29,0:29:81.16:0,81,882	0/0:20,0:20:60.16:0,60,668	0/0:23,0:23:58.92:0,59,667	1/1:3,0:21:45.22:159,45,0	1/1:4,19:24:54.18:857,54,0	0/0:28,0:28:75.19:0,75,836	1/1:1,15:17:44.64:675,45,0	1/1:3,30:33:78.27:1238,78,0	0/0:25,0:25:66.14:0,66,726	0/0:27,0:27:66.15:0,66,735	0/0:26,0:26:69.15:0,69,751	0/0:20,0:20:57.13:0,57,626	0/0:18,0:18:48.13:0,48,535	0/0:24,0:24:60.13:0,60,657	0/0:31,0:31:87.18:0,87,956	0/0:15,0:15:45.12:0,45,502	0/0:21,0:21:60.16:0,60,669	0/0:30,0:30:75.14:0,75,823	0/0:10,0:10:30.08:0,30,334
chr10	41012155	.	A	AAAAAGATAAAGGAACACAGTGGCA	42770.78	PASS	AB=0.833;AC=53;AF=0.981;AN=54;BaseQRankSum=-0.424;DP=297;FS=7.910;HRun=0;HaplotypeScore=376.0093;InbreedingCoeff=-0.0291;MQ=58.38;MQ0=0;MQRankSum=-1.603;QD=144.01;ReadPosRankSum=1.258;VQSLOD=3.6531;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:13:24.03:1075,24,0	1/1:4,0:4:7.27:498,7,0	1/1:2,0:5:15.02:884,15,0	0/1:4,1:5:6.13:578,0,6	1/1:12,0:12:21.07:1483,21,0	1/1:11,0:11:27.09:1994,27,0	1/1:9,0:9:24.08:1134,24,0	1/1:21,0:21:63.20:4057,63,0	1/1:13,0:13:36.09:2458,36,0	1/1:19,0:19:57.20:3520,57,0	1/1:10,0:10:21.07:914,21,0	1/1:12,0:12:24.08:1589,24,0	1/1:16,0:16:45.15:2692,45,0	1/1:12,0:12:30.10:1650,30,0	1/1:19,0:19:44.97:2406,45,0	1/1:9,0:9:15.04:1013,15,0	1/1:6,0:6:15.04:655,15,0	1/1:6,0:6:6.02:616,6,0	1/1:11,0:10:28.91:1790,29,0	1/1:9,0:9:24.06:1490,24,0	1/1:8,0:8:24.07:1305,24,0	1/1:8,0:8:18.04:605,18,0	1/1:17,0:17:33.11:1756,33,0	1/1:4,0:4:5.98:57,6,0	1/1:7,0:7:18.06:1026,18,0	1/1:19,0:19:47.19:3696,47,0	1/1:12,0:12:28.91:1830,29,0	./.
chr10	41013493	.	CT	C	411.47	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=3.601;DP=541;FS=13.816;HRun=1;HaplotypeScore=121.0343;InbreedingCoeff=0.8313;MQ=46.22;MQ0=32;MQRankSum=-5.897;QD=20.57;ReadPosRankSum=3.687;VQSLOD=2.6987;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:13:6.49:0,6,77	0/0:9,0:9:16.40:0,16,193	0/0:18,1:3:9.03:0,9,114	0/0:37,0:11:15.52:0,16,191	0/0:29,0:29:36.08:0,36,458	0/0:22,0:18:37.49:0,37,406	0/0:6,0:5:9.03:0,9,106	0/0:20,0:19:48.15:0,48,607	1/1:2,7:7:17.08:184,17,0	0/0:21,0:21:51.15:0,51,651	0/0:18,0:18:24.02:0,24,278	0/0:30,0:30:60.43:0,60,776	1/1:0,11:11:30.04:346,30,0	0/0:19,0:18:25.49:0,25,250	0/0:15,0:15:27.06:0,27,326	0/0:19,0:19:42.32:0,42,488	0/0:25,0:24:58.87:0,59,723	0/0:11,0:9:21.07:0,21,276	0/0:15,0:15:45.14:0,45,556	0/0:22,0:22:47.49:0,47,552	0/0:10,0:7:6.02:0,6,75	0/0:22,0:22:33.10:0,33,419	0/0:24,0:24:39.12:0,39,495	0/0:27,0:24:41.86:0,42,514	0/0:28,0:27:36.05:0,36,428	0/0:25,0:25:70.46:0,70,861	0/0:26,0:25:68.03:0,68,834	0/0:6,0:6:15.03:0,15,177
chr10	41013497	.	CT	C	446.78	PASS	AB=1.000;AC=6;AF=0.107;AN=56;BaseQRankSum=3.065;DP=502;FS=5.822;HRun=1;HaplotypeScore=118.3487;InbreedingCoeff=0.6396;MQ=44.23;MQ0=33;MQRankSum=-5.150;QD=10.64;ReadPosRankSum=3.073;VQSLOD=1.9363;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:13:6.48:0,6,64	0/0:8,0:8:13.39:0,13,156	0/0:19,0:2:6.02:0,6,76	0/0:40,0:8:12.08:0,12,126	0/0:28,0:28:30.02:0,30,341	1/1:4,15:15:41.78:488,42,0	1/1:1,4:4:5.98:60,6,0	0/0:18,0:17:48.14:0,48,593	0/1:8,0:6:0.81:11,0,1	0/0:16,0:16:45.15:0,45,597	0/0:15,0:15:15:0,15,175	0/0:28,0:28:57.40:0,57,735	0/1:10,0:10:4.43:13,0,4	0/0:19,0:18:25.49:0,25,247	0/0:12,0:12:18.06:0,18,237	0/0:20,0:20:45.33:0,45,523	0/0:25,0:24:59.17:0,59,729	0/0:11,0:9:21.07:0,21,276	0/0:12,0:12:36.12:0,36,457	0/0:14,0:14:23.41:0,23,247	0/0:11,0:8:6.02:0,6,76	0/0:18,0:18:24.06:0,24,289	0/0:25,0:25:33.11:0,33,419	0/0:27,0:24:40.70:0,41,498	0/0:22,0:21:15.05:0,15,201	0/0:26,0:26:76.48:0,76,931	0/0:25,0:24:65.02:0,65,793	0/0:5,0:5:12.04:0,12,153
chr10	41013498	.	TCTCTCTCTCTCTCTCTCTCTCTCTCTCCTC	T	2047.43	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=4.505;DP=483;FS=58.110;HRun=0;HaplotypeScore=290.4646;InbreedingCoeff=0.1194;MQ=44.02;MQ0=33;MQRankSum=-8.350;QD=10.34;ReadPosRankSum=-5.215;VQSLOD=-0.0916;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:16,0:13:29.35:29,0,63	0/0:8,0:8:10.52:0,11,905	0/0:20,0:3:8.24:0,8,113	0/0:40,0:8:15.02:0,15,268	0/1:25,0:25:8.85:9,0,1067	1/1:18,0:14:13.96:714,14,0	1/1:6,0:5:3.88:46,4,0	0/0:19,0:18:50.84:0,51,2285	1/1:1,2:2:6.02:464,6,0	0/0:16,0:16:45.61:0,46,2473	0/1:15,0:15:22.28:22,0,631	0/1:28,0:28:26:26,0,3686	1/1:0,3:3:9.03:693,9,0	0/1:19,0:18:56.35:56,0,2420	0/1:12,0:12:57.63:58,0,1088	0/1:21,0:21:40.15:40,0,2692	0/0:24,0:23:42.32:0,42,3971	0/0:11,0:9:21.07:0,21,1303	0/0:12,0:12:36.11:0,36,2203	0/0:11,0:11:18.06:0,18,1403	0/1:11,0:8:32.70:33,0,342	0/0:16,0:16:4.18:0,4,543	0/0:23,0:23:1.47:0,1,1558	0/0:28,0:25:47.12:0,47,3050	0/1:20,0:19:25.49:25,0,876	0/0:27,0:27:81.28:0,81,5405	0/0:25,0:24:66.23:0,66,4160	0/0:5,0:5:15.03:0,15,682
chr10	41013528	.	C	CT	9212.46	PASS	AB=0.819;AC=53;AF=0.946;AN=56;BaseQRankSum=-3.152;DP=441;FS=5.180;HRun=1;HaplotypeScore=142.8821;InbreedingCoeff=-0.0736;MQ=62.95;MQ0=21;MQRankSum=-1.413;QD=20.89;ReadPosRankSum=-1.063;VQSLOD=4.4958;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,7:8:11.95:116,12,0	1/1:3,1:5:15.04:177,15,0	0/1:37,6:15:99:257,0,129	0/1:56,3:19:99:106,0,250	1/1:0,11:11:8.81:54,9,0	1/1:6,5:10:29.44:312,29,0	1/1:8,10:18:33.05:410,33,0	1/1:6,13:19:53.89:678,54,0	1/1:10,5:15:32.52:452,33,0	1/1:2,8:10:27.08:358,27,0	0/1:2,3:5:2.97:32,0,3	1/1:12,14:26:66.04:778,66,0	1/1:9,12:21:63.07:696,63,0	1/1:9,11:19:42.49:440,42,0	1/1:6,10:16:35.66:355,36,0	1/1:9,9:18:49.12:659,49,0	1/1:10,5:14:29.83:394,30,0	1/1:7,0:5:8.69:133,9,0	1/1:9,6:15:42.06:544,42,0	1/1:2,2:4:6.02:73,6,0	1/1:5,7:10:5.98:65,6,0	1/1:1,5:6:5.98:65,6,0	1/1:3,6:9:8.81:84,9,0	1/1:18,2:19:42.13:508,42,0	1/1:2,8:9:16.29:179,16,0	1/1:4,7:11:33.11:464,33,0	1/1:10,10:20:57.12:725,57,0	1/1:3,2:5:8.92:98,9,0
chr10	41013533	.	CT	C	9104.54	PASS	AB=0.762;AC=53;AF=0.946;AN=56;BaseQRankSum=-3.049;DP=444;FS=2.049;HRun=4;HaplotypeScore=135.2424;InbreedingCoeff=-0.0547;MQ=70.93;MQ0=14;MQRankSum=-3.979;QD=20.51;ReadPosRankSum=-0.175;VQSLOD=3.4022;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,6:9:21.02:215,21,0	1/1:1,4:5:15.02:150,15,0	0/1:39,10:21:99:286,0,118	0/1:54,7:21:99:144,0,215	1/1:2,10:12:11.05:101,11,0	1/1:0,11:11:29.85:295,30,0	1/1:9,12:21:57:590,57,0	1/1:1,17:18:46.50:481,47,0	1/1:7,8:15:28.11:413,28,0	1/1:2,5:7:15.02:152,15,0	0/1:1,4:5:0.18:61,0,0	1/1:8,15:23:65.93:642,66,0	1/1:7,15:22:65.91:657,66,0	1/1:10,11:20:53.70:578,54,0	1/1:6,11:17:46.53:477,47,0	1/1:10,9:19:49.27:486,49,0	1/1:9,6:14:33.05:346,33,0	1/1:4,1:5:9:106,9,0	1/1:6,8:14:39.11:456,39,0	1/1:0,5:5:12.02:126,12,0	1/1:1,9:10:14.65:177,15,0	1/1:1,5:6:18.05:213,18,0	1/1:1,7:8:18.05:209,18,0	1/1:13,4:17:41.14:467,41,0	1/1:1,8:9:22.56:235,23,0	1/1:5,5:10:21.05:232,21,0	1/1:7,12:19:53.90:569,54,0	1/1:5,4:9:26.22:238,26,0
chr10	41015393	.	CTG	C	2787.15	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.258;DP=597;FS=9.900;HRun=0;HaplotypeScore=74.4143;InbreedingCoeff=0.9979;MQ=86.97;MQ0=0;MQRankSum=-5.098;QD=41.60;ReadPosRankSum=3.070;VQSLOD=5.3566;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,38:38:99:1758,108,0	1/1:0,10:10:26.96:439,27,0	0/0:23,0:24:66.88:0,67,1303	0/0:23,0:23:66.20:0,66,1215	0/0:24,0:24:66.23:0,66,1320	0/0:26,0:26:78.25:0,78,1527	0/0:20,0:20:60.19:0,60,1112	0/0:33,0:33:99:0,99,1946	0/0:19,0:19:57.20:0,57,1157	0/0:25,0:25:72.24:0,72,1423	0/0:19,0:19:57.20:0,57,1157	0/0:20,0:20:60.21:0,60,1163	0/0:14,0:14:42.14:0,42,853	0/0:20,0:20:60.18:0,60,1149	0/0:27,0:27:81.26:0,81,1575	0/0:7,0:7:21.07:0,21,426	0/0:30,0:30:84.21:0,84,1657	0/0:19,0:19:57.11:0,57,1021	0/0:15,0:15:42.13:0,42,768	0/0:30,0:30:84.26:0,84,1634	0/0:21,0:21:63.20:0,63,1224	1/1:0,19:19:45.15:733,45,0	0/0:11,0:11:33.11:0,33,617	0/0:30,0:29:84.28:0,84,1669	0/0:14,0:14:42.09:0,42,811	0/0:15,0:15:45.14:0,45,878	0/0:34,0:34:99:0,102,1997	0/0:10,0:10:30.08:0,30,570
chr10	41017152	.	TATCATC	T	2787.41	PASS	AB=1.000;AC=35;AF=0.673;AN=52;BaseQRankSum=2.013;DP=351;FS=3.334;HRun=0;HaplotypeScore=74.2972;InbreedingCoeff=0.5478;MQ=68.54;MQ0=8;MQRankSum=0.400;QD=12.79;ReadPosRankSum=-1.053;VQSLOD=1.5252;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,0:16:0.47:1,0,0	0/0:6,0:6:12.04:0,12,183	0/0:22,0:11:15.86:0,16,157	0/0:22,0:9:0.04:0,0,130	0/1:4,0:4:0.09:1,0,0	./.	1/1:20,0:20:48.03:603,48,0	1/1:4,8:12:24.07:347,24,0	1/1:15,0:15:3.01:42,3,0	0/0:11,0:11:6.13:0,6,22	1/1:9,0:9:2.33:25,2,0	0/0:10,0:10:30.09:0,30,563	1/1:11,0:11:9.03:126,9,0	1/1:9,0:9:3.01:36,3,0	0/1:12,0:12:2:2,0,41	1/1:14,0:14:3.01:36,3,0	./.	1/1:12,0:12:3.01:30,3,0	1/1:8,4:12:9.03:135,9,0	1/1:7,0:7:12.04:166,12,0	1/1:15,0:15:28.34:446,28,0	0/1:10,0:10:18.09:30,0,18	0/0:4,0:4:9.03:0,9,149	0/0:23,0:23:48.15:0,48,907	1/1:9,0:9:3:29,3,0	1/1:3,12:15:23.98:305,24,0	1/1:10,0:10:18.06:295,18,0	1/1:6,0:6:18.06:297,18,0
chr10	41017166	.	TCATCATCATCACCACCACCACCACCAC	T	1644.98	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=4.106;DP=314;FS=6.596;HRun=0;HaplotypeScore=147.8168;InbreedingCoeff=0.1703;MQ=60.31;MQ0=14;MQRankSum=1.171;QD=12.37;ReadPosRankSum=1.921;VQSLOD=1.8494;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:13:5.67:0,6,36	0/0:4,0:4:12.04:0,12,441	0/0:19,0:8:18.05:0,18,260	0/0:18,0:5:12.82:0,13,224	0/0:7,0:7:14.59:0,15,129	1/1:22,0:22:3.01:76,3,0	1/1:21,0:21:36.47:262,36,0	0/1:12,0:11:3.88:128,0,4	1/1:0,11:11:3.01:218,3,0	0/0:10,0:10:29.98:0,30,535	0/0:7,0:6:9.80:0,10,104	0/0:10,0:10:30.10:0,30,1818	1/1:3,11:13:8.23:651,8,0	0/0:7,0:7:3.90:0,4,173	0/0:9,0:9:26.79:0,27,262	0/0:15,0:15:3.01:0,3,174	0/0:10,0:10:3.01:0,3,51	0/0:13,0:12:6.90:0,7,79	0/1:8,0:8:25.03:52,0,25	0/1:4,0:4:31.97:32,0,43	0/1:12,0:12:99:122,0,152	0/0:9,0:9:2.80:0,3,81	0/0:3,0:3:9.03:0,9,335	0/0:20,0:20:60.16:0,60,2485	0/0:6,0:6:3.01:0,3,57	0/1:12,0:12:83.47:83,0,187	0/1:11,0:10:89.02:109,0,89	0/1:6,0:6:10.74:69,0,11
chr10	41017169	.	TCATCATCACCACCACCACCACCACCACCACCACCAC	T	2208.98	PASS	AB=0.917;AC=18;AF=0.321;AN=56;BaseQRankSum=-1.364;DP=304;FS=10.606;HRun=0;HaplotypeScore=171.9806;InbreedingCoeff=0.1470;MQ=58.75;MQ0=15;MQRankSum=2.284;QD=15.56;ReadPosRankSum=-1.345;VQSLOD=2.0404;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:12,0:11:0.47:1,0,0	0/0:5,0:5:15.05:0,15,805	0/0:18,0:7:15.86:0,16,157	0/0:18,0:5:0.04:0,0,162	0/0:8,0:8:7.33:0,7,320	1/1:0,23:23:3.01:177,3,0	1/1:20,0:20:48.04:666,48,0	0/1:10,0:9:26.77:298,0,27	1/1:11,0:11:3.01:61,3,0	0/0:10,0:10:12.87:0,13,782	0/0:6,0:5:6.02:0,6,258	0/0:12,0:12:36.11:0,36,3282	1/1:13,0:12:8.57:189,9,0	0/0:8,0:8:4.37:0,4,291	0/0:9,0:9:0.99:0,1,62	0/0:12,0:12:6.02:0,6,358	0/0:10,0:10:3.01:0,3,156	0/0:10,0:9:5.61:0,6,178	1/1:8,0:8:0.65:123,1,0	0/1:0,0:4:67.67:68,0,220	0/1:12,0:11:99:274,0,438	0/0:8,0:8:4.92:0,5,131	0/0:3,0:3:9.03:0,9,394	0/0:19,0:19:51.16:0,51,2904	0/0:6,0:6:3.01:0,3,171	0/1:12,0:12:99:172,0,420	0/1:11,0:10:99:198,0,702	0/1:6,0:6:99:135,0,255
chr10	41017172	.	TCATCACCAC	T	2399.49	PASS	AB=1.000;AC=41;AF=0.788;AN=52;BaseQRankSum=6.293;DP=298;FS=2.469;HRun=0;HaplotypeScore=72.2429;InbreedingCoeff=0.5731;MQ=55.05;MQ0=16;MQRankSum=0.623;QD=11.43;ReadPosRankSum=-0.320;VQSLOD=1.6101;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:12,0:11:3:25,3,0	0/0:5,0:5:11.56:0,12,93	0/1:17,0:6:22.69:23,0,32	0/0:16,0:4:5.12:0,5,62	1/1:7,0:7:8.86:59,9,0	./.	1/1:19,0:19:38.59:277,39,0	1/1:10,0:9:20.89:161,21,0	1/1:11,0:11:3.01:63,3,0	1/1:9,0:9:23.84:193,24,0	1/1:1,0:5:3.01:64,3,0	0/0:12,0:12:32.97:0,33,564	1/1:14,0:12:8.63:187,9,0	1/1:0,8:8:2.88:91,3,0	1/1:8,0:8:17.97:147,18,0	1/1:0,13:13:3.01:89,3,0	./.	1/1:2,0:9:4.26:76,4,0	1/1:7,0:7:9.91:70,10,0	1/1:4,0:4:11.87:120,12,0	1/1:12,0:11:26.97:223,27,0	1/1:1,0:8:5.98:92,6,0	0/0:5,0:5:12:0,12,122	0/0:17,0:17:47.99:0,48,734	1/1:0,0:6:3.01:67,3,0	1/1:12,0:12:20.66:144,21,0	1/1:11,0:10:24.01:241,24,0	1/1:6,0:6:17.98:149,18,0
chr10	41017496	.	CTT	C	3736	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=13.856;DP=584;FS=0.922;HRun=2;HaplotypeScore=78.1856;InbreedingCoeff=0.9873;MQ=85.35;MQ0=0;MQRankSum=-3.087;QD=41.05;ReadPosRankSum=1.690;VQSLOD=3.6630;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,114,2261	0/0:6,0:6:18.06:0,18,366	0/0:18,0:18:51.17:0,51,1022	0/0:23,0:23:66.22:0,66,1226	1/1:1,13:14:36.08:524,36,0	0/0:29,0:29:87.30:0,87,1766	0/0:32,0:32:96.29:0,96,1879	0/0:16,0:16:48.16:0,48,929	0/0:25,0:25:75.26:0,75,1523	0/0:20,0:20:60.21:0,60,1190	0/0:6,0:6:18.06:0,18,366	0/0:23,0:23:69.24:0,69,1388	0/0:27,0:27:81.28:0,81,1610	1/1:1,24:25:69.23:1042,69,0	0/0:20,0:20:60.21:0,60,1191	1/1:1,22:23:13.03:911,13,0	1/1:1,28:29:84.24:1259,84,0	0/0:35,0:35:99:0,105,2061	0/0:16,0:16:48.13:0,48,904	0/0:8,0:8:24.08:0,24,488	0/0:38,0:38:99:0,111,2179	0/0:18,0:18:54.18:0,54,1070	0/0:9,0:9:27.09:0,27,529	0/0:27,0:27:81.28:0,81,1632	0/0:9,0:9:27.05:0,27,499	0/0:13,0:13:39.13:0,39,759	0/0:25,0:25:75.26:0,75,1503	0/0:12,0:11:33.11:0,33,670
chr10	41018253	.	AT	A	4377.36	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=13.172;DP=570;FS=1.541;HRun=8;HaplotypeScore=55.8298;InbreedingCoeff=0.9433;MQ=78.00;MQ0=0;MQRankSum=-2.000;QD=22.92;ReadPosRankSum=2.725;VQSLOD=5.3990;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,126,1522	1/1:1,9:10:24.04:232,24,0	0/0:18,0:18:35.49:0,35,384	0/1:12,0:12:2.48:2,0,206	1/1:0,20:20:57.09:550,57,0	1/1:2,23:25:63.10:608,63,0	1/1:1,21:22:45.07:435,45,0	0/0:26,0:26:69.21:0,69,834	1/1:3,20:23:60.10:579,60,0	0/0:17,0:16:45.13:0,45,534	0/0:21,0:22:60.05:0,60,703	0/0:14,0:14:36.11:0,36,435	1/1:3,23:26:69.11:666,69,0	1/1:0,11:11:33.05:319,33,0	0/0:19,0:19:51.16:0,51,616	1/1:2,20:22:51.08:493,51,0	1/1:3,17:20:51.08:493,51,0	0/0:17,0:16:48.13:0,48,567	0/0:21,1:22:37.20:0,37,709	0/0:22,0:22:60.17:0,60,711	0/0:17,0:17:51.15:0,51,605	0/0:18,1:19:25.19:0,25,587	0/0:15,0:15:42.12:0,42,498	0/0:16,0:17:45:0,45,522	0/0:35,0:35:99:0,99,1196	0/0:18,0:18:51.16:0,51,616	0/0:32,1:33:67.30:0,67,1080	0/0:4,0:4:12.04:0,12,145
chr10	41019378	.	A	ACTGCATTGACG	12686.86	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-4.072;DP=699;FS=5.152;HRun=0;HaplotypeScore=211.8596;InbreedingCoeff=0.9995;MQ=83.09;MQ0=0;MQRankSum=-15.103;QD=106.61;ReadPosRankSum=-1.074;VQSLOD=4.2708;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:23,16:46:81.28:3670,81,0	1/1:4,7:13:33.11:1814,33,0	0/0:19,0:19:30.06:0,30,854	0/0:25,0:26:51.12:0,51,1460	0/0:18,0:18:54.19:0,54,1901	1/1:7,9:18:45.15:2033,45,0	1/1:16,13:32:84.29:4088,84,0	0/0:35,0:35:87.30:0,87,2769	0/0:19,0:19:57.20:0,57,1946	0/0:19,0:19:54.18:0,54,1795	0/0:15,0:15:39.12:0,39,1235	0/0:32,0:32:96.29:0,96,3235	0/0:29,0:29:84.27:0,84,2803	0/0:32,0:32:93.30:0,93,3048	0/0:32,0:32:93.30:0,93,3157	0/0:37,0:37:99:0,108,3570	0/0:35,0:35:99:0,102,3419	0/0:23,0:23:57.20:0,57,2004	0/0:18,0:18:54.14:0,54,1550	0/0:22,0:22:60.15:0,60,1836	0/0:37,0:37:99:0,102,3212	1/1:3,4:10:27.09:1081,27,0	0/0:14,0:14:42.14:0,42,1422	0/0:34,0:34:99:0,102,3497	0/0:25,0:25:69.23:0,69,2327	0/0:22,0:22:60.21:0,60,2041	0/0:24,0:24:69.24:0,69,2390	0/0:13,0:13:39.11:0,39,1144
chr10	41020151	.	C	CT	1733.93	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-9.633;DP=619;FS=8.319;HRun=7;HaplotypeScore=67.0069;InbreedingCoeff=0.9973;MQ=89.81;MQ0=0;MQRankSum=-5.666;QD=28.43;ReadPosRankSum=1.634;VQSLOD=4.3073;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,38:41:99:1256,105,0	0/0:11,0:10:24.03:0,24,232	0/0:27,0:27:48.57:0,49,503	0/0:22,0:22:32.87:0,33,292	0/0:22,0:22:63.09:0,63,603	0/0:19,0:19:57.09:0,57,550	0/0:20,0:20:60.07:0,60,568	0/0:27,0:27:72.10:0,72,686	0/0:31,0:31:81.11:0,81,776	0/0:19,0:19:51.08:0,51,492	0/0:13,0:13:33.05:0,33,318	0/0:17,0:17:51.07:0,51,487	0/0:17,0:17:51.08:0,51,492	0/0:19,0:19:51.06:0,51,486	0/0:26,0:26:72.11:0,72,695	0/0:27,0:27:75.10:0,75,718	0/0:35,0:35:99:0,99,941	0/0:11,0:11:30.05:0,30,290	0/0:21,0:21:51.06:0,51,485	0/0:21,0:21:48.04:0,48,458	0/0:22,0:22:60.08:0,60,573	1/1:2,18:20:51.11:600,51,0	0/0:21,0:21:63.10:0,63,608	0/0:22,0:22:60.06:0,60,571	0/0:25,0:25:60.09:0,60,579	0/0:30,0:30:69.10:0,69,666	0/0:25,0:25:66.10:0,66,637	0/0:8,0:8:24.04:0,24,232
chr10	41020294	.	T	TA	5693.85	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-14.474;DP=579;FS=8.312;HRun=7;HaplotypeScore=56.3849;InbreedingCoeff=0.9509;MQ=80.47;MQ0=0;MQRankSum=1.077;QD=28.61;ReadPosRankSum=1.739;VQSLOD=5.4411;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:87.11:0,87,833	1/1:0,3:3:9.03:109,9,0	0/0:15,0:15:27.03:0,27,259	0/0:14,0:14:10.14:0,10,125	0/0:25,0:25:61.03:0,61,327	1/1:4,15:19:30.09:362,30,0	1/1:3,19:22:48.15:580,48,0	0/0:30,0:30:75.11:0,75,721	1/1:2,19:21:48.15:580,48,0	1/1:5,19:24:57.16:676,57,0	1/1:1,28:29:78.15:923,78,0	0/0:15,0:15:39.06:0,39,377	1/1:1,21:22:60.18:724,60,0	0/0:16,0:16:39.95:0,40,200	1/1:1,19:20:45.14:544,45,0	0/0:18,1:19:10.16:0,10,175	0/0:17,0:17:43.15:0,43,218	1/1:2,18:20:48.15:580,48,0	0/0:25,0:25:69.11:0,69,666	0/0:23,0:23:63.10:0,63,608	0/0:16,0:16:45.06:0,45,430	0/0:20,0:20:45.04:0,45,424	0/0:14,0:14:42.07:0,42,406	0/0:25,0:25:63.10:0,63,608	1/1:1,18:19:51.16:616,51,0	0/0:25,2:27:2.76:0,3,588	0/0:33,0:33:78.10:0,78,746	0/0:15,0:15:42.07:0,42,405
chr10	41022511	.	CT	C	4418.63	PASS	AB=0.932;AC=52;AF=0.929;AN=56;BaseQRankSum=2.383;DP=463;FS=12.371;HRun=1;HaplotypeScore=135.1732;InbreedingCoeff=-0.0815;MQ=83.69;MQ0=1;MQRankSum=-2.094;QD=9.54;ReadPosRankSum=6.507;VQSLOD=1.1795;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:27:50.21:310,50,0	1/1:8,0:8:19:83,19,0	0/1:26,6:29:51.57:52,0,249	0/1:27,4:20:82.21:82,0,83	1/1:14,0:14:39.20:191,39,0	1/1:18,0:18:46.91:214,47,0	1/1:31,0:31:68.90:327,69,0	1/1:17,0:17:38.37:142,38,0	1/1:15,0:15:33.53:161,34,0	1/1:10,0:10:4.14:71,4,0	1/1:15,0:15:39.01:193,39,0	1/1:15,0:15:35.94:164,36,0	1/1:18,0:18:47.07:215,47,0	1/1:10,0:10:9.93:96,10,0	0/1:14,0:14:10.33:128,0,10	1/1:16,0:16:44.35:220,44,0	1/1:32,0:32:61.83:352,62,0	1/1:10,0:10:19.34:81,19,0	1/1:12,0:12:4.13:76,4,0	1/1:7,0:7:19:82,19,0	1/1:15,0:15:38.78:182,39,0	1/1:13,0:13:30.52:146,31,0	1/1:15,0:15:38.42:170,38,0	1/1:19,0:19:49.55:222,50,0	1/1:13,0:12:27.43:126,27,0	0/1:9,0:9:0.79:56,0,1	1/1:15,0:15:11.35:130,11,0	1/1:12,0:12:32.87:145,33,0
chr10	41022512	.	TC	T	13708.77	PASS	AB=0.896;AC=54;AF=0.964;AN=56;BaseQRankSum=-4.705;DP=460;FS=1.141;HRun=3;HaplotypeScore=102.2178;InbreedingCoeff=-0.0376;MQ=82.94;MQ0=1;MQRankSum=-4.212;QD=29.80;ReadPosRankSum=3.829;VQSLOD=4.3235;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,26:27:78.24:965,78,0	1/1:0,8:8:20.99:260,21,0	0/1:27,3:28:99:130,0,139	0/1:26,4:19:93.20:147,0,93	1/1:0,14:14:42.13:521,42,0	1/1:0,18:18:51.16:632,51,0	1/1:0,31:31:75.24:929,75,0	1/1:0,17:17:51.15:621,51,0	1/1:0,15:15:36.11:446,36,0	1/1:1,9:10:27.08:334,27,0	1/1:0,15:15:42.13:520,42,0	1/1:0,15:15:39.12:483,39,0	1/1:0,18:18:51.16:628,51,0	1/1:1,9:10:27.08:335,27,0	1/1:2,12:14:36.11:446,36,0	1/1:0,16:16:48.15:595,48,0	1/1:1,31:32:90.28:1116,90,0	1/1:0,10:10:24.03:280,24,0	1/1:1,11:12:33.06:381,33,0	1/1:0,7:7:21.07:260,21,0	1/1:0,15:15:42.13:520,42,0	1/1:0,13:13:33.10:409,33,0	1/1:0,15:15:42.13:520,42,0	1/1:0,19:19:54.17:669,54,0	1/1:1,12:13:30.09:372,30,0	1/1:0,9:9:24.07:297,24,0	1/1:1,14:15:36.11:446,36,0	1/1:0,12:12:36.11:446,36,0
chr10	41023605	.	TA	T	2466.67	PASS	AB=0.985;AC=27;AF=0.482;AN=56;BaseQRankSum=18.320;DP=556;FS=8.511;HRun=1;HaplotypeScore=146.7446;InbreedingCoeff=0.7922;MQ=80.03;MQ0=0;MQRankSum=-3.039;QD=8.33;ReadPosRankSum=4.835;VQSLOD=0.8553;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:84.12:0,84,1159	0/0:9,0:9:27.07:0,27,406	0/0:19,0:19:56.96:0,57,741	0/0:13,0:13:31.99:0,32,396	1/1:12,2:14:38.38:211,38,0	0/0:27,0:27:81.25:0,81,1227	0/0:32,0:32:96.29:0,96,1470	0/1:30,0:30:8.13:165,0,8	0/0:22,0:22:66.21:0,66,1024	1/1:10,0:10:22.16:95,22,0	1/1:9,1:10:23.28:117,23,0	0/0:17,0:17:51.13:0,51,785	0/0:23,0:23:69.19:0,69,1026	0/1:20,1:21:26.83:167,0,27	1/1:15,0:15:28.38:114,28,0	0/0:13,0:13:39.09:0,39,574	1/1:32,0:32:63.99:306,64,0	1/1:17,0:17:46.02:209,46,0	0/1:16,0:16:38.05:77,0,38	1/1:16,0:16:18.54:178,19,0	1/1:32,0:32:50.87:271,51,0	0/0:16,0:16:48.16:0,48,740	0/0:23,0:23:69.21:0,69,1034	0/0:16,0:16:45.12:0,45,668	1/1:21,2:23:22.98:206,23,0	1/1:17,1:18:42.13:174,42,0	1/1:19,1:19:21.16:193,21,0	1/1:22,0:22:52.28:208,52,0
chr10	41023606	.	AC	A	8807.47	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=15.231;DP=554;FS=2.745;HRun=5;HaplotypeScore=125.3633;InbreedingCoeff=0.9993;MQ=79.43;MQ0=0;MQRankSum=-2.629;QD=29.96;ReadPosRankSum=2.781;VQSLOD=3.7746;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:69.19:0,69,922	0/0:9,0:9:24.08:0,24,328	0/0:19,0:19:57.08:0,57,719	0/0:12,0:12:26.99:0,27,328	1/1:2,12:14:42.12:475,42,0	0/0:27,0:27:75.23:0,75,995	0/0:32,0:32:90.30:0,90,1230	1/1:3,26:29:75.19:838,75,0	0/0:22,0:22:63.20:0,63,845	1/1:0,10:10:30.09:340,30,0	1/1:1,9:10:27.07:299,27,0	0/0:17,0:17:48.16:0,48,656	0/0:23,0:23:63.21:0,63,858	1/1:5,16:21:51.14:578,51,0	1/1:0,15:15:33.09:374,33,0	0/0:13,0:13:39.11:0,39,515	1/1:1,31:32:90.26:1021,90,0	1/1:0,17:17:51.15:578,51,0	1/1:2,13:15:39.11:442,39,0	1/1:1,15:16:45.13:508,45,0	1/1:1,31:32:84.24:952,84,0	0/0:16,0:16:48.16:0,48,654	0/0:23,0:23:69.23:0,69,939	0/0:17,0:17:45.09:0,45,578	1/1:3,20:23:51.14:576,51,0	1/1:1,17:18:54.14:602,54,0	1/1:2,18:20:48.14:543,48,0	1/1:0,22:22:60.17:681,60,0
chr10	41023632	.	G	GC	1247.20	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-4.098;DP=581;FS=2.882;HRun=1;HaplotypeScore=157.3936;InbreedingCoeff=0.7472;MQ=76.90;MQ0=0;MQRankSum=-2.127;QD=37.79;ReadPosRankSum=-1.343;VQSLOD=2.9627;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,33:33:90.30:1342,90,0	0/0:10,0:10:23.88:0,24,83	0/0:17,0:17:42.11:0,42,509	0/0:12,0:12:27.07:0,27,327	0/0:13,0:13:30.26:0,30,115	0/0:21,0:21:63.20:0,63,805	0/0:28,0:28:84.26:0,84,1076	0/0:28,0:28:44.01:0,44,195	0/0:21,0:21:50.68:0,51,177	0/0:16,0:16:29.56:0,30,90	0/0:17,0:17:36.92:0,37,138	0/0:20,0:20:51.16:0,51,661	0/0:20,0:20:24.73:0,25,162	0/0:17,0:17:39.73:0,40,150	0/0:21,0:21:32.04:0,32,117	0/0:21,0:21:50.26:0,50,174	0/0:37,0:37:59.44:0,59,242	0/0:19,0:19:40.98:0,41,144	0/0:19,0:19:0.51:0,1,86	0/0:19,0:19:27.42:0,27,156	0/0:30,0:30:65.83:0,66,239	0/0:17,0:17:18:0,18,136	0/0:18,0:18:54.15:0,54,662	0/0:19,0:19:57.15:0,57,707	0/0:26,0:26:8.09:0,8,152	0/0:24,0:24:52.01:0,52,162	0/0:19,0:18:45.51:0,46,178	0/0:19,0:19:48.19:0,48,182
chr10	41024019	.	T	TTTGC	8382.13	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=1.824;DP=554;FS=4.651;HRun=0;HaplotypeScore=107.8456;InbreedingCoeff=0.8118;MQ=74.65;MQ0=9;MQRankSum=-3.109;QD=18.14;ReadPosRankSum=-3.328;VQSLOD=3.3796;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:36,0:36:29.57:195,30,0	1/1:10,0:9:11.91:88,12,0	0/0:23,0:18:27.17:0,27,511	0/0:26,0:19:8.54:0,9,534	1/1:25,0:25:38.72:328,39,0	1/1:20,0:20:15.05:189,15,0	1/1:18,0:18:8.61:111,9,0	1/1:27,0:27:55.47:973,55,0	1/1:26,0:25:3.01:64,3,0	1/1:17,0:17:35.14:610,35,0	1/1:22,0:22:47.94:696,48,0	0/0:12,0:12:31.33:0,31,450	1/1:20,0:20:6.02:104,6,0	1/1:13,0:13:6.02:90,6,0	1/1:5,18:23:3.01:79,3,0	1/1:17,0:17:11.06:125,11,0	1/1:22,0:21:6.80:99,7,0	1/1:14,1:15:21.06:342,21,0	1/1:12,0:12:33.50:472,34,0	1/1:13,0:13:27.04:419,27,0	1/1:22,0:22:14.74:154,15,0	1/1:21,0:20:29.58:245,30,0	0/0:10,0:9:24.08:0,24,362	0/0:21,0:21:57.16:0,57,805	1/1:14,0:14:33.11:556,33,0	1/1:33,0:33:81.44:1200,81,0	1/1:22,0:26:58.92:958,59,0	1/1:10,0:7:18.06:287,18,0
chr10	41024022	.	G	GCTTGCT	9214.15	PASS	AB=1.000;AC=45;AF=0.804;AN=56;BaseQRankSum=2.043;DP=617;FS=11.521;HRun=0;HaplotypeScore=145.6554;InbreedingCoeff=0.7480;MQ=69.42;MQ0=9;MQRankSum=-3.732;QD=17.82;ReadPosRankSum=-2.838;VQSLOD=3.4690;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:38,0:38:32.73:243,33,0	1/1:10,0:9:11.78:74,12,0	0/0:20,0:15:27.42:0,27,511	0/0:25,0:18:8.45:0,8,534	1/1:29,0:29:38.59:314,39,0	1/1:29,0:29:24.55:306,25,0	1/1:19,0:19:14.66:161,15,0	1/1:33,0:33:61.48:1034,61,0	1/1:7,22:32:6:145,6,0	1/1:22,0:22:54.02:879,54,0	1/1:24,0:24:47.91:695,48,0	0/0:17,0:17:8.67:0,9,439	1/1:4,0:24:9.50:165,10,0	1/1:12,0:12:5.89:76,6,0	1/1:23,0:23:2.88:47,3,0	1/1:17,0:17:3.51:83,4,0	0/1:22,0:21:5.93:57,0,6	1/1:16,0:16:23.78:304,24,0	1/1:14,0:14:39.04:541,39,0	1/1:16,0:16:27.03:419,27,0	1/1:27,0:27:14.81:164,15,0	1/1:22,0:21:29.54:257,30,0	0/0:11,0:10:24.08:0,24,362	0/0:24,0:27:57.05:0,57,847	1/1:14,0:14:33.11:556,33,0	1/1:32,0:32:84.62:1271,85,0	1/1:31,0:31:62.73:1136,63,0	1/1:10,0:7:18.53:288,19,0
chr10	41024024	.	T	TTG	7280.90	PASS	AB=0.693;AC=33;AF=0.589;AN=56;BaseQRankSum=-2.842;DP=655;FS=34.460;HRun=0;HaplotypeScore=129.1657;InbreedingCoeff=0.0234;MQ=67.42;MQ0=9;MQRankSum=1.164;QD=13.21;ReadPosRankSum=3.712;VQSLOD=3.0721;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:12,27:41:77.02:108,0,77	1/1:2,9:10:11.91:121,12,0	0/0:19,0:14:27.13:0,27,511	0/0:25,0:18:7.96:0,8,533	1/1:9,22:32:39.19:360,39,0	0/1:11,19:30:15.05:166,0,15	0/1:5,14:19:32.96:97,0,33	1/1:32,0:32:18.23:926,18,0	0/1:32,0:31:0.41:33,0,0	0/1:14,9:23:99:339,0,226	1/1:24,2:26:48:699,48,0	0/0:21,0:21:39.11:0,39,543	1/1:24,0:24:2.32:37,2,0	1/1:4,13:18:6.01:122,6,0	0/1:23,0:23:17.86:29,0,18	0/1:2,14:17:9.84:188,0,10	1/1:12,14:25:11.23:175,11,0	0/1:6,10:17:17.56:296,0,18	0/1:9,8:19:27.77:409,0,28	1/1:17,0:17:27.52:420,28,0	0/1:10,13:27:53.68:54,0,65	0/1:6,16:22:17.83:162,0,18	0/0:11,0:10:24.08:0,24,362	0/0:28,0:28:72.01:0,72,932	1/1:18,0:18:31.61:554,32,0	0/1:8,25:34:66.08:1011,0,66	0/1:30,1:31:64.83:689,0,65	1/1:11,0:8:17.24:285,17,0
chr10	41024344	.	T	TG	1181.92	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-8.000;DP=616;FS=17.351;HRun=1;HaplotypeScore=78.6024;InbreedingCoeff=0.9986;MQ=79.49;MQ0=0;MQRankSum=-0.481;QD=38.13;ReadPosRankSum=-0.233;VQSLOD=1.8698;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,102,1320	0/0:9,0:9:27.09:0,27,350	0/0:17,0:17:51.17:0,51,661	0/0:23,0:23:52.72:0,53,677	0/0:27,0:27:66.21:0,66,856	1/1:0,17:17:48.16:719,48,0	1/1:1,13:14:39.13:585,39,0	0/0:36,0:36:99:0,105,1340	0/0:25,0:25:69.21:0,69,881	0/0:30,0:30:90.29:0,90,1164	0/0:16,0:16:42.14:0,42,544	0/0:16,0:16:42.14:0,42,545	0/0:17,0:17:48.16:0,48,623	0/0:30,0:30:84.27:0,84,1088	0/0:21,0:21:54.18:0,54,700	0/0:17,0:17:42.14:0,42,545	0/0:19,0:19:54.16:0,54,686	0/0:24,0:24:63.18:0,63,801	0/0:21,0:21:60.19:0,60,779	0/0:16,0:16:42.12:0,42,531	0/0:32,0:32:96.27:0,96,1202	0/0:12,0:12:36.12:0,36,467	0/0:11,0:11:27.09:0,27,350	0/0:27,0:27:78.19:0,78,978	0/0:20,0:20:57.18:0,57,738	0/0:43,0:43:99:0,120,1541	0/0:28,0:28:78.24:0,78,997	0/0:13,0:13:33.06:0,33,409
chr10	41024539	.	GTC	G	4646.47	PASS	AB=1.000;AC=55;AF=0.982;AN=56;BaseQRankSum=-1.889;DP=588;FS=0.000;HRun=0;HaplotypeScore=195.9214;InbreedingCoeff=-0.0337;MQ=38.84;MQ0=30;MQRankSum=0.691;QD=7.90;ReadPosRankSum=-0.596;VQSLOD=4.1025;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:23:7.62:63,8,0	1/1:6,0:6:5.99:50,6,0	1/1:33,0:5:9.03:36,9,0	0/1:35,0:7:15.69:20,0,16	1/1:18,0:18:23.94:191,24,0	1/1:17,1:18:5.92:40,6,0	1/1:15,1:14:9.43:68,9,0	1/1:16,0:14:35.06:226,35,0	1/1:16,3:19:18.29:138,18,0	1/1:2,21:22:35.84:283,36,0	1/1:14,2:16:14.86:111,15,0	1/1:18,3:21:20.46:142,20,0	1/1:20,1:20:29.43:183,29,0	1/1:21,1:22:20.28:148,20,0	1/1:21,1:21:8.84:58,9,0	1/1:4,20:22:8.86:75,9,0	1/1:30,0:28:19.96:303,20,0	1/1:12,2:13:29.69:204,30,0	1/1:10,0:10:20.12:114,20,0	1/1:15,3:18:26.48:198,26,0	1/1:26,0:24:7.31:73,7,0	1/1:17,2:19:23.86:186,24,0	1/1:16,1:16:29.90:236,30,0	1/1:28,0:26:14.90:113,15,0	1/1:23,5:28:41.73:318,42,0	1/1:25,1:25:71.12:491,71,0	1/1:23,3:25:55.95:362,56,0	1/1:8,3:11:29.76:217,30,0
chr10	41024554	.	TGTG	T	427.47	PASS	AB=0.956;AC=18;AF=0.321;AN=56;BaseQRankSum=4.870;DP=447;FS=0.000;HRun=0;HaplotypeScore=213.5438;InbreedingCoeff=0.1155;MQ=49.87;MQ0=13;MQRankSum=-3.461;QD=2.46;ReadPosRankSum=4.812;VQSLOD=2.2962;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:20:5.32:0,5,98	0/1:5,0:5:0:1,0,0	0/0:26,0:7:18.03:0,18,193	0/0:35,0:13:32.75:0,33,337	0/0:17,0:17:5.68:0,6,72	1/1:13,0:13:5.98:53,6,0	0/1:6,1:7:0:1,0,0	0/0:10,0:10:20.31:0,20,106	0/1:16,0:16:9.70:40,0,10	0/1:15,1:16:27.55:28,0,71	1/1:12,1:13:5.96:49,6,0	0/1:19,0:19:34.19:74,0,34	0/0:14,0:14:7.19:0,7,47	0/0:18,0:18:10.52:0,11,100	0/0:17,1:18:4.79:0,5,54	0/0:20,0:18:11.75:0,12,121	0/0:29,0:27:41.10:0,41,612	0/1:10,1:11:6.54:7,0,74	0/0:4,0:4:9.05:0,9,43	0/1:13,0:13:24.61:46,0,25	0/0:20,0:20:3.22:0,3,18	1/1:10,0:10:1.92:29,2,0	0/1:13,0:12:20.62:24,0,21	0/0:24,0:22:1.70:0,2,17	1/1:12,4:16:11.73:84,12,0	0/0:17,0:16:18.12:0,18,224	0/1:13,1:14:54.07:54,0,107	0/1:7,1:8:31.67:93,0,32
chr10	41024561	.	TAGA	T	3000.08	PASS	AB=0.889;AC=48;AF=0.857;AN=56;BaseQRankSum=4.039;DP=366;FS=36.053;HRun=0;HaplotypeScore=187.3352;InbreedingCoeff=0.3748;MQ=57.55;MQ0=8;MQRankSum=-3.742;QD=9.71;ReadPosRankSum=-6.206;VQSLOD=0.3840;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,1:9:20.03:110,20,0	1/1:6,0:6:17.65:136,18,0	0/0:23,0:8:15.78:0,16,61	0/0:34,0:14:29.53:0,30,173	1/1:12,0:12:12.07:80,12,0	1/1:8,1:9:23.59:202,24,0	1/1:6,1:7:20.34:113,20,0	1/1:6,0:6:5.22:11,5,0	1/1:9,3:12:10.31:90,10,0	0/1:12,3:15:0.65:65,0,1	1/1:10,2:12:17.51:126,18,0	1/1:12,3:16:35.66:282,36,0	1/1:12,1:13:19.82:129,20,0	1/1:13,0:13:0.71:102,1,0	1/1:18,1:19:27.74:229,28,0	1/1:13,1:13:4.55:35,5,0	1/1:10,0:10:9:64,9,0	1/1:9,2:11:5.03:59,5,0	0/1:4,0:4:0.39:5,0,0	1/1:8,3:11:29.27:202,29,0	1/1:16,0:16:18.94:108,19,0	1/1:8,2:10:18.29:137,18,0	1/1:9,1:9:11.84:107,12,0	1/1:16,2:18:25.95:165,26,0	1/1:13,5:18:46.77:352,47,0	0/1:16,1:17:13.19:19,0,13	0/1:10,4:14:28.98:113,0,29	1/1:4,3:7:4.86:98,5,0
chr10	41025421	.	AT	A	1557.63	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.272;DP=517;FS=2.580;HRun=5;HaplotypeScore=49.7677;InbreedingCoeff=0.9969;MQ=73.64;MQ0=0;MQRankSum=-1.433;QD=28.85;ReadPosRankSum=4.019;VQSLOD=3.7428;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:26.75:0,27,369	0/0:10,0:10:27.07:0,27,340	0/0:15,0:15:39.13:0,39,516	0/0:11,0:11:33.11:0,33,426	0/0:37,0:37:99:0,102,1388	0/0:29,0:29:87.28:0,87,1174	0/0:10,0:10:27.09:0,27,369	0/0:28,0:28:81.26:0,81,1089	1/1:2,15:17:45.13:510,45,0	0/0:22,0:22:63.20:0,63,836	0/0:30,0:30:84.26:0,84,1121	0/0:20,0:20:57.17:0,57,751	1/1:0,19:19:51:578,51,0	0/0:14,0:14:42.14:0,42,575	0/0:13,0:13:39.10:0,39,501	0/0:16,0:16:48.16:0,48,657	0/0:10,0:10:30.10:0,30,409	0/0:16,0:16:48.11:0,48,619	0/0:12,0:12:24.08:0,24,325	0/0:29,0:29:81.24:0,81,1073	0/0:8,0:8:24.08:0,24,325	1/1:0,18:18:54.15:612,54,0	0/0:21,0:21:57.19:0,57,780	0/0:10,0:10:30.10:0,30,407	0/0:15,0:15:45.15:0,45,616	0/0:27,0:27:75.21:0,75,963	0/0:32,0:32:87.29:0,87,1189	0/0:17,0:17:51.17:0,51,698
chr10	41025538	.	G	GATAT	2710.50	PASS	AB=0.550;AC=21;AF=0.375;AN=56;BaseQRankSum=9.468;DP=507;FS=1.312;HRun=0;HaplotypeScore=87.9147;InbreedingCoeff=0.8655;MQ=65.15;MQ0=0;MQRankSum=-1.703;QD=15.85;ReadPosRankSum=0.884;VQSLOD=3.4530;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,1:4:3.01:76,3,0	1/1:2,3:5:9.03:186,9,0	0/0:10,0:10:15.01:0,15,224	0/0:6,0:6:9.03:0,9,157	1/1:7,0:44:29.87:312,30,0	1/1:4,19:24:56.98:1383,57,0	1/1:4,0:4:12.03:252,12,0	0/0:34,0:34:81.27:0,81,1347	1/1:3,0:22:47.56:216,48,0	0/0:23,0:23:60.21:0,60,1038	0/0:24,0:24:60.19:0,60,1016	0/0:21,0:21:51.17:0,51,854	1/1:5,0:20:33.62:153,34,0	1/1:5,0:13:16.79:76,17,0	0/0:19,0:19:54.14:0,54,882	1/1:0,0:10:16.79:76,17,0	0/1:2,0:11:22.29:66,0,22	0/0:9,0:9:24.08:0,24,417	0/0:24,0:24:57.19:0,57,979	0/0:35,0:35:87.25:0,87,1381	0/0:21,0:21:60.20:0,60,1027	1/1:3,0:14:27.98:127,28,0	0/0:24,0:24:57.19:0,57,976	0/0:9,0:9:21.07:0,21,365	0/0:27,0:27:78.27:0,78,1334	0/0:17,0:17:48.16:0,48,803	0/0:25,0:25:69.19:0,69,1168	0/0:8,0:8:12.04:0,12,209
chr10	41027111	.	TG	T	495.07	PASS	AB=0.928;AC=18;AF=0.333;AN=54;BaseQRankSum=2.901;DP=406;FS=12.794;HRun=10;HaplotypeScore=80.3189;InbreedingCoeff=0.4879;MQ=69.44;MQ0=32;MQRankSum=-1.571;QD=2.78;ReadPosRankSum=2.176;VQSLOD=-0.7160;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:31,0:22:14.87:150,15,0	0/0:8,0:7:3.83:0,4,35	0/1:24,0:12:2.20:2,0,109	0/0:23,0:13:4.81:0,5,81	0/0:18,0:18:13.85:0,14,135	0/1:10,5:11:8.82:145,0,9	1/1:7,6:9:8.75:77,9,0	0/0:22,0:21:27.46:0,27,279	1/1:15,0:13:20.40:116,20,0	1/1:12,0:10:2.98:26,3,0	0/0:10,0:10:0:0,0,1	0/0:14,0:14:12.05:0,12,69	1/1:18,0:16:1.56:27,2,0	0/0:9,0:9:9.02:0,9,97	1/1:14,0:12:2.71:14,3,0	0/0:16,0:15:12.54:0,13,220	0/0:15,0:15:21.02:0,21,178	1/1:4,4:5:8.99:77,9,0	0/0:7,0:7:7.99:0,8,87	0/0:9,0:8:8.75:0,9,90	0/0:23,0:23:42.04:0,42,412	./.	0/0:8,0:8:6.96:0,7,68	0/0:20,0:19:12.89:0,13,99	0/1:15,0:14:1.43:11,0,1	0/1:12,0:11:13.60:14,0,77	0/0:11,0:11:8.23:0,8,147	0/0:2,0:2:6:0,6,58
chr10	41027119	.	GGGAGAGAGAGAGAGA	G	1085.55	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=1.866;DP=383;FS=7.303;HRun=0;HaplotypeScore=129.4074;InbreedingCoeff=0.1709;MQ=64.01;MQ0=38;MQRankSum=1.532;QD=7.70;ReadPosRankSum=3.579;VQSLOD=1.6753;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:20:60.66:61,0,1409	0/0:6,0:5:8.62:0,9,542	0/0:24,0:10:0.79:0,1,112	0/0:21,0:11:5.70:0,6,83	0/0:11,0:15:16.79:0,17,177	0/1:20,0:16:44.63:45,0,802	0/1:14,0:10:4.84:5,0,705	0/0:19,0:17:33.49:0,33,737	1/1:9,5:12:20.64:703,21,0	0/1:13,0:11:5.64:6,0,797	0/1:13,0:12:0:0,0,1	0/0:11,0:11:15.04:0,15,754	1/1:7,9:14:2.26:360,2,0	0/0:6,0:5:11.70:0,12,108	0/0:13,0:11:0.88:0,1,2	0/0:15,0:14:9.24:0,9,324	0/0:11,0:11:7.62:0,8,301	0/1:10,0:7:33.96:34,0,409	0/0:5,0:5:14.93:0,15,128	0/0:11,0:8:8.83:0,9,262	0/0:21,0:21:54.15:0,54,2064	0/0:1,12:13:0.47:0,0,1	0/0:6,0:6:9.97:0,10,230	0/0:20,0:19:11.99:0,12,430	0/0:12,0:11:5.70:0,6,186	0/1:11,0:10:4.57:5,0,559	0/0:9,0:9:24.04:0,24,811	0/0:4,0:3:9.02:0,9,186
chr10	41027120	.	G	GA	898.96	PASS	AB=0.874;AC=21;AF=0.375;AN=56;BaseQRankSum=1.583;DP=401;FS=32.000;HRun=0;HaplotypeScore=88.0425;InbreedingCoeff=0.2121;MQ=58.93;MQ0=40;MQRankSum=-0.310;QD=4.01;ReadPosRankSum=-0.366;VQSLOD=0.9970;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:21,10:22:5.10:193,0,5	0/1:5,1:5:23.64:40,0,24	0/0:24,0:8:0.78:0,1,112	0/0:21,0:10:3.87:0,4,80	0/0:13,0:14:13.85:0,14,135	0/1:13,7:16:2.82:199,0,3	1/1:10,4:10:17.93:148,18,0	0/0:19,0:17:27.21:0,27,278	1/1:10,1:9:0.73:44,1,0	1/1:10,7:16:17.89:145,18,0	0/1:12,6:17:0.01:0,0,1	0/1:13,0:13:23.70:36,0,24	0/0:13,2:12:4.20:0,4,13	0/0:6,0:5:11.97:0,12,115	1/1:6,10:14:2.09:19,2,0	0/0:11,0:14:13.76:0,14,248	0/1:9,0:11:4.92:5,0,181	1/1:11,1:9:12.84:123,13,0	0/0:5,0:5:8.01:0,8,92	0/0:11,0:8:8.70:0,9,83	0/0:21,0:21:39.69:0,40,393	0/0:13,0:13:0.47:0,0,1	0/1:8,0:8:14.89:15,0,58	0/1:13,0:18:0.43:0,0,73	1/1:5,11:15:0.98:67,1,0	0/1:11,0:10:19.65:20,0,73	0/0:9,0:9:3.59:0,4,132	0/0:4,0:3:6.89:0,7,60
chr10	41027149	.	GA	G	1194.51	PASS	AB=1.000;AC=16;AF=0.286;AN=56;BaseQRankSum=1.227;DP=508;FS=13.995;HRun=1;HaplotypeScore=81.9416;InbreedingCoeff=0.7087;MQ=59.34;MQ0=38;MQRankSum=1.257;QD=8.85;ReadPosRankSum=3.748;VQSLOD=-0.2469;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:27:54.17:0,54,752	0/0:5,0:5:15.03:0,15,178	0/0:42,0:18:42.12:0,42,492	0/0:59,0:22:50.53:0,51,536	0/0:22,0:21:33.09:0,33,402	0/1:21,0:15:10.86:11,0,116	0/1:20,0:18:8.08:8,0,100	1/1:24,0:23:39.26:549,39,0	0/0:15,0:15:26.90:0,27,222	0/0:21,0:20:54.73:0,55,696	0/0:21,0:21:20.40:0,20,273	0/0:13,0:13:17.28:0,17,220	0/0:14,0:12:25.02:0,25,248	0/0:6,0:5:14.99:0,15,170	0/0:19,0:18:17.92:0,18,226	0/0:13,0:13:22.34:0,22,269	0/0:15,0:14:25.38:0,25,307	0/0:13,0:12:30.03:0,30,366	1/1:2,10:11:30.07:385,30,0	1/1:14,2:13:1.24:3,1,0	1/1:16,3:17:18.49:162,18,0	0/0:12,0:12:9.03:0,9,113	0/0:13,0:13:15.04:0,15,197	0/0:18,0:17:17.79:0,18,223	0/0:21,0:21:27.09:0,27,349	1/1:9,1:7:17.90:189,18,0	1/1:9,0:8:2.27:23,2,0	1/1:1,2:1:3.01:41,3,0
chr10	41027150	.	A	AG	1999.28	PASS	AB=0.617;AC=16;AF=0.286;AN=56;BaseQRankSum=-1.903;DP=516;FS=10.638;HRun=1;HaplotypeScore=82.8434;InbreedingCoeff=0.7303;MQ=60.72;MQ0=37;MQRankSum=2.088;QD=14.49;ReadPosRankSum=2.993;VQSLOD=2.2895;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:27:54.14:0,54,649	0/0:6,0:6:14.21:0,14,128	0/0:42,0:18:42.12:0,42,504	0/0:61,0:24:50.25:0,50,519	0/0:22,0:21:33.09:0,33,406	0/1:9,3:16:91.70:108,0,92	0/1:7,12:19:75.24:82,0,75	1/1:1,23:23:53.28:700,53,0	0/0:15,0:15:29.93:0,30,292	0/0:22,0:21:53.14:0,53,571	0/0:21,0:21:20.60:0,21,266	0/0:13,0:13:16.98:0,17,146	0/0:15,0:13:26.98:0,27,291	0/0:7,0:6:15.04:0,15,182	0/0:19,0:18:17.92:0,18,228	0/0:12,0:12:26.51:0,27,261	0/0:14,0:13:32.40:0,32,295	0/0:14,0:13:26.76:0,27,315	1/1:11,2:11:30.09:385,30,0	1/1:5,12:14:3.01:45,3,0	1/1:7,13:18:30.06:422,30,0	0/0:11,0:11:9.03:0,9,114	0/0:13,0:13:15.03:0,15,176	0/0:19,0:18:16.67:0,17,197	0/0:22,0:22:27.08:0,27,336	1/1:1,9:7:18.06:254,18,0	1/1:2,7:8:11.99:154,12,0	1/1:3,0:1:3.01:38,3,0
chr10	41027863	.	AATT	A	3798.41	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=8.605;DP=611;FS=9.514;HRun=0;HaplotypeScore=101.6411;InbreedingCoeff=0.9975;MQ=78.22;MQ0=0;MQRankSum=-1.336;QD=40.84;ReadPosRankSum=2.203;VQSLOD=4.5162;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:93.31:0,93,2084	0/0:17,0:17:51.18:0,51,1175	0/0:11,0:11:30.10:0,30,623	0/0:17,0:17:39.12:0,39,813	1/1:2,29:31:75.14:1171,75,0	0/0:33,0:33:99:0,99,2263	0/0:26,0:26:78.27:0,78,1798	0/0:28,0:28:78.26:0,78,1724	0/0:19,0:19:54.19:0,54,1225	0/0:23,0:23:60.21:0,60,1384	0/0:15,0:15:45.13:0,45,949	0/0:19,0:19:57.18:0,57,1270	0/0:16,0:16:45.15:0,45,997	1/1:1,23:24:54.14:889,54,0	0/0:25,0:25:75.26:0,75,1698	1/1:1,16:17:45.15:767,45,0	1/1:0,21:21:57.20:971,57,0	0/0:6,0:6:18.06:0,18,415	0/0:24,0:24:72.24:0,72,1594	0/0:32,0:32:96.32:0,96,2149	0/0:24,0:24:72.25:0,72,1660	0/0:22,0:22:66.23:0,66,1521	0/0:17,0:17:51.16:0,51,1091	0/0:22,0:22:63.22:0,63,1426	0/0:21,0:21:63.21:0,63,1387	0/0:34,0:34:99:0,102,2276	0/0:24,0:24:66.23:0,66,1522	0/0:12,0:12:36.11:0,36,734
chr10	41028341	.	AC	A	9589.65	PASS	AB=0.972;AC=31;AF=0.554;AN=56;BaseQRankSum=-13.691;DP=614;FS=13.148;HRun=1;HaplotypeScore=143.6411;InbreedingCoeff=0.5053;MQ=73.83;MQ0=0;MQRankSum=0.126;QD=23.00;ReadPosRankSum=-4.830;VQSLOD=2.5338;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,25:25:72.24:993,72,0	1/1:0,10:10:27.05:354,27,0	1/1:9,3:12:4.96:75,5,0	0/1:15,3:18:32.15:83,0,32	0/0:30,0:30:20.18:0,20,177	1/1:0,18:18:51.17:711,51,0	1/1:0,24:24:69.23:963,69,0	1/1:0,28:28:84.24:1109,84,0	0/1:20,0:20:5.67:6,0,102	0/1:22,0:22:3.09:3,0,82	0/0:20,0:20:14.28:0,14,100	0/1:37,0:37:89.21:89,0,116	0/1:21,0:21:7.87:8,0,89	0/0:24,0:24:19.23:0,19,130	0/0:29,0:29:33.23:0,33,188	0/1:30,0:30:10.97:11,0,130	0/0:20,0:20:48.94:0,49,170	0/1:18,1:19:38.56:39,0,96	1/1:1,20:21:63.19:860,63,0	1/1:1,26:27:73:1082,73,0	1/1:0,18:18:48.16:670,48,0	0/0:14,0:14:3.60:0,4,67	0/0:24,0:24:52.57:0,53,181	0/0:20,0:20:15.53:0,16,112	0/0:16,0:16:29.33:0,29,94	1/1:1,28:29:79.82:1111,80,0	1/1:0,22:22:54.18:752,54,0	1/1:0,16:16:48.16:670,48,0
chr10	41028487	.	A	AAGG	1244.42	PASS	AB=0.977;AC=14;AF=0.250;AN=56;BaseQRankSum=-7.368;DP=499;FS=9.183;HRun=0;HaplotypeScore=130.9901;InbreedingCoeff=0.5205;MQ=56.20;MQ0=7;MQRankSum=3.856;QD=7.23;ReadPosRankSum=-1.296;VQSLOD=2.3942;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:14.71:0,15,90	0/0:9,0:9:8.85:0,9,56	0/1:25,0:12:0.64:1,0,75	0/1:21,0:12:23.37:23,0,55	0/0:21,0:21:20.31:0,20,200	0/0:27,0:27:23.52:0,24,145	0/0:28,0:26:23.56:0,24,145	0/0:22,0:21:14.52:0,15,87	0/1:7,0:7:1.74:27,0,2	0/0:31,0:32:44.86:0,45,277	0/0:15,0:15:17.70:0,18,113	1/1:15,2:17:32.58:596,33,0	0/1:8,0:9:1.13:53,0,1	0/0:26,0:26:41.04:0,41,248	0/0:24,0:23:25.17:0,25,155	0/0:13,0:12:29.45:0,29,186	0/0:8,0:8:8.83:0,9,54	0/0:6,0:6:5.91:0,6,38	0/1:21,0:16:0.21:0,0,99	0/0:16,0:16:18.33:0,18,197	0/0:12,0:11:5.90:0,6,37	1/1:18,0:14:21.76:185,22,0	1/1:5,2:7:17.09:273,17,0	1/1:4,10:14:15.45:233,15,0	0/0:19,0:19:32.50:0,33,209	0/1:32,0:32:20.48:20,0,220	0/0:27,0:27:44.77:0,45,315	0/0:6,0:6:5.91:0,6,39
chr10	41028494	.	AGGAGGT	A	8564.15	PASS	AB=0.997;AC=37;AF=0.661;AN=56;BaseQRankSum=-10.813;DP=486;FS=1.574;HRun=0;HaplotypeScore=121.2989;InbreedingCoeff=-0.0437;MQ=50.98;MQ0=8;MQRankSum=-6.002;QD=19.60;ReadPosRankSum=-5.856;VQSLOD=2.7630;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:12.48:0,12,46	0/1:9,0:9:7.45:35,0,7	0/1:23,1:7:23.71:24,0,95	0/1:21,0:11:34.78:35,0,170	0/1:22,0:22:35.04:37,0,35	0/1:26,0:26:34.64:35,0,43	0/0:25,0:23:15.70:0,16,58	1/1:3,18:20:53.62:663,54,0	0/1:8,0:8:36.84:37,0,74	1/1:8,22:30:71.90:1218,72,0	1/1:1,13:14:18.06:412,18,0	0/1:17,0:17:24.82:25,0,560	0/1:8,0:8:23.60:24,0,98	0/1:26,0:26:2.31:2,0,53	1/1:0,19:19:27.09:618,27,0	0/1:14,0:13:14.51:28,0,15	0/0:9,0:9:6.24:0,6,21	1/1:0,4:4:6.02:138,6,0	1/1:6,17:18:50.89:769,51,0	1/1:1,14:15:42.04:863,42,0	1/1:3,8:10:7.27:141,7,0	0/1:19,0:15:84.31:84,0,205	0/1:8,0:8:28.91:29,0,212	0/1:15,0:15:21:21,0,197	1/1:1,18:19:33.11:755,33,0	1/1:7,24:31:75.10:1276,75,0	1/1:1,26:27:42.19:1159,42,0	1/1:0,6:6:6.02:137,6,0
chr10	41028497	.	AGGT	A	7608.30	PASS	AB=0.989;AC=48;AF=0.857;AN=56;BaseQRankSum=-4.961;DP=468;FS=5.853;HRun=0;HaplotypeScore=101.7554;InbreedingCoeff=-0.1840;MQ=50.36;MQ0=10;MQRankSum=-2.134;QD=16.26;ReadPosRankSum=-1.644;VQSLOD=4.0434;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,14:14:15.05:255,15,0	1/1:0,9:9:11.83:179,12,0	0/1:22,1:6:23.71:24,0,134	0/1:21,1:9:45.36:45,0,90	1/1:1,21:22:44.96:661,45,0	1/1:2,23:26:24.08:397,24,0	1/1:1,21:20:24.08:394,24,0	1/1:20,0:19:53.71:477,54,0	0/1:9,0:9:16.02:55,0,16	1/1:27,0:27:71.72:633,72,0	1/1:14,0:14:18.01:160,18,0	0/1:19,0:19:30.07:30,0,121	0/1:7,0:7:32.61:33,0,41	1/1:1,24:25:42.14:697,42,0	1/1:19,0:19:27.02:247,27,0	1/1:5,10:14:38.99:567,39,0	1/1:0,8:8:9.03:153,9,0	1/1:4,0:4:6:53,6,0	1/1:22,0:17:50.81:452,51,0	1/1:14,0:14:41.93:359,42,0	1/1:10,0:9:7.25:57,7,0	0/1:18,0:14:58.36:117,0,58	0/1:8,0:8:33.69:34,0,37	0/1:13,0:13:26.69:52,0,27	1/1:18,0:18:33.01:293,33,0	1/1:27,0:27:74.94:669,75,0	1/1:27,0:26:53.40:464,53,0	1/1:6,0:6:6:53,6,0
chr10	41028530	.	AGAAGAT	A	1936.28	PASS	AB=0.966;AC=18;AF=0.333;AN=54;BaseQRankSum=-2.839;DP=469;FS=0.000;HRun=0;HaplotypeScore=147.6039;InbreedingCoeff=-0.1365;MQ=35.60;MQ0=15;MQRankSum=0.604;QD=6.41;ReadPosRankSum=-5.194;VQSLOD=0.5661;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:17,0:17:86.29:117,0,86	0/0:7,0:7:1.97:0,2,105	0/1:28,0:4:7.42:7,0,38	0/0:17,0:2:2.87:0,3,15	1/1:19,5:23:49.02:463,49,0	0/1:30,0:30:51.48:51,0,260	0/1:19,0:18:10.44:10,0,176	0/0:17,0:13:26.94:0,27,262	1/1:9,0:8:2.79:18,3,0	0/1:28,0:27:37.08:37,0,326	0/0:11,0:10:17.56:0,18,110	0/0:21,0:21:0.61:0,1,58	0/1:4,0:4:12.32:12,0,15	0/1:22,4:26:71.38:541,0,71	0/0:23,0:22:25.22:0,25,193	0/1:15,7:20:57.11:493,0,57	1/1:6,0:4:6.02:86,6,0	0/0:3,0:2:2.98:0,3,21	0/0:16,0:14:11.92:0,12,221	0/1:17,0:17:77.82:78,0,89	0/0:8,0:7:6.96:0,7,32	0/1:21,0:16:19.20:131,0,19	0/0:11,0:11:15.06:0,15,245	0/0:7,0:7:12.43:0,12,121	0/1:26,0:25:12.16:12,0,164	0/1:24,0:24:34.64:35,0,294	0/0:20,0:19:25.56:0,26,292	./.
chr10	41028542	.	AGAAGAAGAAGAT	A	2103.48	PASS	AB=1.000;AC=36;AF=0.643;AN=56;BaseQRankSum=1.249;DP=466;FS=1.135;HRun=0;HaplotypeScore=188.0611;InbreedingCoeff=-0.3861;MQ=36.36;MQ0=14;MQRankSum=1.230;QD=4.79;ReadPosRankSum=-1.704;VQSLOD=2.6808;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:15,0:15:31.33:132,0,31	0/1:6,0:6:45.93:46,0,131	1/1:17,0:2:3:27,3,0	0/0:14,0:1:0.47:0,0,1	0/1:28,0:27:37.50:39,0,37	0/1:28,0:28:98.81:99,0,186	0/1:19,0:18:25.14:71,0,25	0/1:21,0:13:11.38:11,0,43	1/1:9,0:8:1.25:3,1,0	0/1:29,0:28:92.49:92,0,424	0/0:13,0:12:5.47:0,5,88	0/1:16,0:16:14:14,0,80	0/1:7,0:8:36.44:36,0,51	0/1:24,0:24:28.36:28,0,258	0/1:22,0:21:29.90:30,0,266	0/1:21,0:19:68.26:68,0,384	1/1:6,0:4:1.20:3,1,0	1/1:3,0:2:0.89:2,1,0	1/1:14,0:12:2.74:147,3,0	1/1:14,3:17:14.49:431,14,0	0/1:11,0:10:29.10:29,0,70	0/1:20,0:15:46.63:47,0,135	0/1:14,0:13:7.59:8,0,335	1/1:8,0:8:13.28:99,13,0	0/1:30,0:29:77.74:78,0,138	1/1:27,0:27:42.67:327,43,0	1/1:20,1:20:1.16:362,1,0	1/1:4,0:4:2.96:19,3,0
chr10	41028551	.	AGAT	A	4792.45	PASS	AB=1.000;AC=45;AF=0.833;AN=54;BaseQRankSum=3.151;DP=464;FS=1.727;HRun=0;HaplotypeScore=121.8873;InbreedingCoeff=-0.0135;MQ=39.27;MQ0=10;MQRankSum=0.484;QD=10.70;ReadPosRankSum=-1.527;VQSLOD=4.4700;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:18:44.69:350,45,0	0/1:7,0:7:34.26:63,0,34	1/1:13,0:1:3:27,3,0	./.	1/1:23,1:23:23.32:235,23,0	1/1:29,0:29:47.07:358,47,0	1/1:19,0:19:38.43:265,38,0	0/1:21,0:12:3.06:3,0,77	1/1:10,1:10:13.51:103,14,0	1/1:29,0:28:67.27:471,67,0	1/1:10,0:9:12.25:74,12,0	1/1:1,17:18:15.04:229,15,0	1/1:8,0:8:10.26:84,10,0	0/1:23,0:23:23.72:179,0,24	1/1:24,0:23:16.66:105,17,0	0/1:22,0:20:2.17:189,0,2	1/1:5,0:3:1.81:5,2,0	1/1:4,0:3:6.88:53,7,0	1/1:9,0:8:4.25:95,4,0	1/1:18,0:18:17.53:234,18,0	0/1:11,0:10:35.88:53,0,36	1/1:20,0:15:26.23:198,26,0	0/1:20,0:19:33.81:270,0,34	1/1:10,0:10:4.21:112,4,0	1/1:29,0:28:47.68:324,48,0	1/1:23,2:25:58.41:521,58,0	0/1:21,0:20:16.76:193,0,17	0/0:9,0:9:0.47:0,0,1
chr10	41028593	.	AGAGGAG	A	4763.85	PASS	AB=1.000;AC=30;AF=0.536;AN=56;BaseQRankSum=-1.234;DP=574;FS=7.795;HRun=0;HaplotypeScore=179.8832;InbreedingCoeff=0.1291;MQ=50.32;MQ0=9;MQRankSum=-1.833;QD=10.49;ReadPosRankSum=-1.765;VQSLOD=3.2265;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:22:1.42:1,0,110	0/1:5,0:5:19.66:128,0,20	0/0:11,0:6:18.06:0,18,372	0/0:10,0:5:15.04:0,15,253	0/1:26,0:25:13.44:13,0,116	0/1:28,0:27:35.82:36,0,122	0/1:27,0:27:3.59:4,0,31	0/1:28,0:26:14.79:15,0,47	1/1:11,0:10:21.05:304,21,0	1/1:29,0:28:62.75:850,63,0	1/1:3,15:17:28.68:355,29,0	0/0:27,0:27:48.16:0,48,853	1/1:19,0:19:48.23:726,48,0	0/1:31,0:31:39.71:87,0,40	1/1:24,0:23:4.94:49,5,0	0/1:24,0:22:63.94:84,0,64	1/1:5,0:3:0.35:1,0,0	1/1:7,0:7:11.37:193,11,0	0/1:16,0:15:2.59:3,0,19	0/1:30,0:30:24.88:25,0,80	0/0:17,0:15:0.61:0,1,92	1/1:22,0:20:47.02:746,47,0	0/0:23,0:22:57.18:0,57,1227	0/0:15,0:15:39.11:0,39,724	1/1:30,0:29:66.41:966,66,0	0/1:25,0:25:7.78:147,0,8	0/1:26,0:26:32.13:32,0,91	0/0:17,0:17:3.01:0,3,36
chr10	41028597	.	G	GA	585.98	PASS	AB=0.912;AC=7;AF=0.125;AN=56;BaseQRankSum=6.103;DP=578;FS=4.195;HRun=1;HaplotypeScore=150.4259;InbreedingCoeff=0.5182;MQ=51.74;MQ0=7;MQRankSum=-0.385;QD=5.23;ReadPosRankSum=1.051;VQSLOD=0.6211;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:56.97:0,57,619	0/0:5,0:5:14.39:0,14,82	0/0:13,0:8:21.06:0,21,263	0/0:11,0:6:18.06:0,18,227	0/0:25,0:24:36.29:0,36,269	0/0:28,0:27:49.09:0,49,321	0/0:29,0:29:75.92:0,76,383	0/0:28,0:27:72.53:0,73,377	0/0:11,0:10:19.13:0,19,90	1/1:24,1:24:40.41:339,40,0	0/0:17,1:17:11.46:0,11,34	0/0:29,0:29:54.15:0,54,671	0/0:20,0:20:52.43:0,52,250	0/0:31,0:31:39.98:0,40,307	0/1:21,4:24:27.86:31,0,28	0/1:25,0:23:2.57:3,0,208	0/0:4,0:2:5.91:0,6,38	0/1:6,0:6:6.13:30,0,6	0/0:16,1:16:19.26:0,19,158	0/0:28,0:28:38.36:0,38,286	0/0:19,0:17:34.95:0,35,194	0/0:21,0:19:27.69:0,28,199	0/0:22,0:22:57.19:0,57,742	0/0:17,0:17:45.14:0,45,558	1/1:30,0:29:17.42:318,17,0	0/0:25,0:25:55.40:0,55,276	0/0:27,0:27:42.30:0,42,319	0/0:17,0:17:2.84:0,3,14
chr10	41028599	.	G	GGAGGAA	7773.65	PASS	AB=0.933;AC=36;AF=0.643;AN=56;BaseQRankSum=0.701;DP=581;FS=9.598;HRun=0;HaplotypeScore=173.4389;InbreedingCoeff=0.8357;MQ=52.39;MQ0=6;MQRankSum=-0.394;QD=18.73;ReadPosRankSum=-0.847;VQSLOD=3.5885;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:56.66:0,57,1069	0/1:6,0:6:9.95:10,0,89	0/0:13,0:8:17.24:0,17,383	0/0:11,0:6:17.95:0,18,252	1/1:28,0:27:49.53:406,50,0	1/1:27,0:26:49.41:659,49,0	1/1:29,0:29:75.63:612,76,0	1/1:27,0:27:65.01:525,65,0	0/0:11,0:10:14.20:0,14,124	1/1:24,0:24:50.51:482,51,0	1/1:16,0:16:32.50:219,32,0	0/0:28,0:28:54.16:0,54,1067	0/0:20,0:20:26.66:0,27,384	1/1:29,0:29:52.85:382,53,0	0/1:22,0:25:1:142,0,1	1/1:25,0:23:23.37:285,23,0	1/1:5,0:3:8.91:62,9,0	1/1:8,0:7:13.38:124,13,0	1/1:16,0:16:38.87:460,39,0	1/1:28,0:28:65.17:965,65,0	1/1:20,0:18:10.37:260,10,0	0/0:22,0:20:29.81:0,30,245	0/0:22,0:22:57.05:0,57,1102	0/0:17,0:17:45.03:0,45,646	1/1:29,0:28:53.99:632,54,0	1/1:25,0:25:64.01:588,64,0	1/1:27,0:27:71.93:868,72,0	1/1:0,17:17:3.01:95,3,0
chr10	41028600	.	G	GAAG	4456.39	PASS	AB=1.000;AC=38;AF=0.679;AN=56;BaseQRankSum=3.534;DP=590;FS=2.243;HRun=0;HaplotypeScore=155.6001;InbreedingCoeff=0.4367;MQ=53.37;MQ0=6;MQRankSum=-1.637;QD=9.38;ReadPosRankSum=-0.846;VQSLOD=4.3786;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:57.62:0,58,742	0/1:6,0:6:16.30:16,0,40	0/0:14,0:9:24.04:0,24,335	0/0:11,0:6:18.04:0,18,222	1/1:29,0:28:5.31:43,5,0	1/1:27,0:26:26.41:141,26,0	1/1:29,0:29:14.55:135,15,0	0/1:27,0:27:3.56:59,0,4	1/1:11,0:10:1.40:24,1,0	1/1:25,0:24:66.96:1037,67,0	1/1:17,0:16:33.05:403,33,0	0/0:28,0:28:54.15:0,54,799	0/1:20,0:20:1.16:61,0,1	0/1:29,0:29:11.31:11,0,30	1/1:9,16:25:15.35:238,15,0	0/1:25,0:23:12.86:22,0,13	1/1:5,0:3:3.45:23,3,0	1/1:8,0:7:17.43:191,17,0	1/1:18,0:17:11.79:131,12,0	1/1:28,0:28:15.90:229,16,0	0/1:21,0:19:9.43:102,0,9	1/1:23,0:21:5.72:41,6,0	0/0:22,0:22:56.57:0,57,823	0/0:17,0:17:29.26:0,29,386	1/1:29,0:28:72.17:1184,72,0	1/1:25,0:25:15.37:123,15,0	1/1:27,0:27:1.89:206,2,0	1/1:20,0:20:3.01:36,3,0
chr10	41029475	.	AT	A	5239.53	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=3.307;DP=527;FS=0.000;HRun=10;HaplotypeScore=88.8074;InbreedingCoeff=0.9801;MQ=72.75;MQ0=0;MQRankSum=-0.912;QD=20.39;ReadPosRankSum=3.746;VQSLOD=5.3360;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,13:21:41.34:349,41,0	1/1:4,9:13:26.99:234,27,0	0/0:18,0:17:24.01:0,24,236	0/0:8,0:8:11.96:0,12,115	1/1:4,20:24:56.96:493,57,0	0/0:5,0:26:68.95:0,69,357	0/0:6,0:19:40.11:0,40,212	0/0:32,0:32:72.05:0,72,733	1/1:2,17:18:47.98:417,48,0	1/1:3,13:16:32.94:280,33,0	1/1:5,7:12:26:211,26,0	0/0:20,0:20:45.12:0,45,495	1/1:4,17:21:56.99:494,57,0	1/1:0,18:18:44.99:391,45,0	1/1:6,14:20:41.98:365,42,0	1/1:3,12:15:35.97:312,36,0	1/1:2,19:21:56.98:495,57,0	1/1:1,14:15:35.99:313,36,0	0/0:23,0:23:50.96:0,51,525	0/0:29,0:29:56.92:0,57,585	0/0:15,0:15:36.10:0,36,398	1/1:2,14:16:41.98:365,42,0	0/0:14,0:14:31.72:0,32,301	0/0:9,0:9:21.06:0,21,232	1/1:2,24:26:59.98:521,60,0	0/0:19,1:20:33.94:0,34,586	0/0:33,0:35:90.04:0,90,956	0/0:2,0:2:6.01:0,6,59
chr10	41029527	.	T	TA	1922.54	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-4.120;DP=501;FS=1.607;HRun=9;HaplotypeScore=69.1056;InbreedingCoeff=0.9270;MQ=67.48;MQ0=0;MQRankSum=-2.006;QD=21.13;ReadPosRankSum=-1.245;VQSLOD=3.8095;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:16:20.36:0,20,60	0/0:1,0:11:16.76:0,17,50	0/0:8,0:8:3.93:0,4,38	0/0:4,0:4:7.51:0,8,49	0/0:39,0:38:95.94:0,96,828	1/1:7,20:27:51.11:552,51,0	1/1:4,3:7:12.03:126,12,0	0/0:21,0:21:62.99:0,63,547	1/1:4,20:23:61.36:646,61,0	0/0:16,0:16:44.99:0,45,391	0/0:22,0:22:62.98:0,63,547	0/0:17,0:17:44.99:0,45,391	1/1:5,14:19:45.10:485,45,0	0/0:23,0:23:56.98:0,57,495	0/0:13,0:13:29.99:0,30,260	0/0:18,0:19:53.01:0,53,447	0/0:30,0:30:71.95:0,72,619	0/0:16,0:15:41.96:0,42,359	0/0:20,0:20:50.97:0,51,440	0/0:29,0:29:77.79:0,78,657	0/0:14,0:14:29.98:0,30,256	1/1:2,12:14:27.03:285,27,0	0/0:12,0:13:35.90:0,36,303	0/0:7,0:7:18:0,18,156	0/0:24,0:24:62.96:0,63,545	0/0:21,0:21:26.13:0,26,369	0/0:22,0:21:53.97:0,54,468	0/0:4,0:5:11.03:0,11,84
chr10	41029608	.	A	ATT	5315.36	PASS	AB=0.896;AC=33;AF=0.589;AN=56;BaseQRankSum=5.684;DP=550;FS=1.324;HRun=12;HaplotypeScore=86.3365;InbreedingCoeff=0.7728;MQ=69.15;MQ0=1;MQRankSum=-2.198;QD=14.10;ReadPosRankSum=-4.521;VQSLOD=2.8497;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:14,0:15:3.14:3,0,192	0/0:16,0:18:32.07:0,32,312	0/1:12,0:12:3.42:3,0,95	0/0:15,0:11:7.54:0,8,41	1/1:7,1:21:3.57:135,4,0	1/1:9,6:20:41.60:502,42,0	1/1:6,12:19:33.10:442,33,0	1/1:11,1:25:37.36:332,37,0	1/1:11,7:19:38.57:461,39,0	0/0:16,0:21:19.87:0,20,254	0/0:19,0:20:32.73:0,33,348	0/0:15,0:17:29.51:0,30,300	1/1:13,13:28:65.48:722,65,0	1/1:4,2:19:26.50:176,26,0	0/0:19,0:22:44.78:0,45,463	0/1:12,0:22:61.58:109,0,62	1/1:12,1:37:25.26:212,25,0	0/0:11,0:12:15.77:0,16,220	1/1:4,1:18:37.52:356,38,0	1/1:8,1:23:29.31:261,29,0	1/1:5,1:16:13.27:134,13,0	1/1:14,11:25:56.61:629,57,0	0/0:12,0:13:32.59:0,33,274	0/0:8,0:8:20.97:0,21,190	0/0:25,0:26:47.09:0,47,419	1/1:5,0:20:39.82:334,40,0	1/1:6,5:31:43.61:445,44,0	1/1:0,0:5:6.01:57,6,0
chr10	41030198	.	G	GGT	1967.87	PASS	AB=0.985;AC=34;AF=0.630;AN=54;BaseQRankSum=0.947;DP=700;FS=17.233;HRun=0;HaplotypeScore=121.7940;InbreedingCoeff=0.4524;MQ=65.03;MQ0=18;MQRankSum=-1.483;QD=4.13;ReadPosRankSum=-2.718;VQSLOD=1.3410;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:40,0:40:30.77:242,31,0	0/1:11,0:11:0:0,0,0	./.	0/0:32,0:17:0:0,0,0	1/1:21,0:21:10.60:110,11,0	0/0:18,0:17:12.02:0,12,123	0/0:29,0:30:6.56:0,7,47	1/1:30,0:29:2.98:21,3,0	0/0:18,0:22:8.69:0,9,59	1/1:29,0:28:1.88:36,2,0	1/1:14,1:15:0.31:78,0,0	0/1:19,0:19:9.73:10,0,81	0/0:24,0:24:5.30:0,5,18	1/1:24,0:24:4.75:50,5,0	1/1:30,0:30:24.49:269,24,0	1/1:19,1:30:8.65:90,9,0	1/1:39,0:38:19.34:140,19,0	0/1:29,2:31:39.59:215,0,40	1/1:13,2:16:9.86:89,10,0	1/1:17,1:17:3.48:45,3,0	1/1:55,2:54:7.70:284,8,0	0/0:12,0:12:2.79:0,3,14	0/0:16,0:17:14.46:0,14,116	0/0:34,0:36:25.87:0,26,290	1/1:7,7:17:6.16:127,6,0	0/1:21,0:21:4.79:54,0,5	1/1:14,3:16:12.28:211,12,0	1/1:12,0:11:5.95:61,6,0
chr10	41030534	.	C	CT	14975.82	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-16.296;DP=673;FS=0.990;HRun=6;HaplotypeScore=62.9777;InbreedingCoeff=0.9995;MQ=83.15;MQ0=0;MQRankSum=-3.370;QD=32.99;ReadPosRankSum=1.195;VQSLOD=5.0766;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,102,1041	1/1:0,8:8:24.08:302,24,0	0/0:17,0:17:27.70:0,28,337	0/0:24,0:24:53.75:0,54,506	1/1:1,20:21:60.15:737,60,0	1/1:0,23:23:66.21:830,66,0	1/1:1,20:21:54.17:679,54,0	1/1:6,25:31:75.23:930,75,0	0/0:28,0:28:84.14:0,84,839	1/1:2,25:28:78.25:980,78,0	1/1:3,19:22:57.10:681,57,0	0/0:18,0:18:54.12:0,54,551	0/0:18,0:18:54.10:0,54,543	1/1:5,21:26:57.18:716,57,0	1/1:3,29:32:84.27:1057,84,0	1/1:2,22:24:30.28:687,30,0	1/1:1,25:26:66.21:830,66,0	1/1:1,18:19:54.17:677,54,0	1/1:4,14:18:48.10:585,48,0	1/1:2,33:35:99:1246,99,0	1/1:1,17:18:51.16:642,51,0	0/0:18,0:18:45.10:0,45,459	0/0:26,0:26:72.16:0,72,734	0/0:35,0:35:99:0,102,1033	1/1:2,18:20:51.16:642,51,0	1/1:5,26:31:78.25:981,78,0	1/1:2,29:30:87.28:1094,87,0	1/1:0,20:20:54.17:679,54,0
chr10	41033741	.	GT	G	168.11	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.520;DP=713;FS=0.000;HRun=3;HaplotypeScore=68.4109;InbreedingCoeff=0.9951;MQ=81.22;MQ0=0;MQRankSum=-0.618;QD=24.02;ReadPosRankSum=1.840;VQSLOD=3.0175;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:40:99:0,111,1580	1/1:0,7:7:21.07:260,21,0	0/0:19,0:19:54.16:0,54,747	0/0:27,0:27:72.23:0,72,1007	0/0:31,0:31:87.28:0,87,1234	0/0:27,0:26:72.17:0,72,992	0/0:20,0:20:51.13:0,51,711	0/0:40,0:40:99:0,114,1590	0/0:35,0:34:96.25:0,96,1327	0/0:35,0:35:99:0,102,1453	0/0:20,0:20:57.19:0,57,820	0/0:22,0:22:66.14:0,66,887	0/0:28,0:27:66.14:0,66,904	0/0:28,0:28:78.26:0,78,1122	0/0:31,0:30:81.27:0,81,1166	0/0:26,0:26:75.25:0,75,1079	0/0:20,0:20:57.19:0,57,819	0/0:13,0:13:33.11:0,33,475	0/0:28,0:27:78.25:0,78,1106	0/0:32,0:32:96.32:0,96,1382	0/0:21,0:21:60.20:0,60,864	0/0:22,0:22:66.22:0,66,950	0/0:21,0:21:63.21:0,63,905	0/0:13,0:13:36.12:0,36,518	0/0:16,0:16:48.16:0,48,691	0/0:40,0:40:99:0,114,1594	0/0:39,0:39:99:0,105,1507	0/0:11,0:11:30.10:0,30,432
chr10	41033865	.	CCA	C	467.87	PASS	AB=0.972;AC=8;AF=0.160;AN=50;BaseQRankSum=5.314;DP=626;FS=17.759;HRun=0;HaplotypeScore=146.9608;InbreedingCoeff=0.4639;MQ=42.96;MQ0=62;MQRankSum=-8.509;QD=2.96;ReadPosRankSum=-1.326;VQSLOD=1.6725;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:26:38.93:0,39,345	0/0:6,0:5:8.88:0,9,92	./.	./.	0/0:18,0:17:31.35:0,31,563	0/0:29,0:23:41.93:0,42,703	0/0:18,0:16:27.06:0,27,394	0/1:24,0:23:1.13:66,0,1	0/0:32,0:29:47.58:0,48,336	0/0:32,0:30:79.46:0,79,1269	0/0:20,0:16:26.07:0,26,470	0/0:30,0:27:60.45:0,60,1069	0/0:37,0:36:52.39:0,52,648	0/0:25,0:25:23.89:0,24,768	0/0:38,0:35:75.31:0,75,1376	0/0:31,0:30:63.22:0,63,1172	0/0:22,0:17:28.94:0,29,597	0/0:12,0:11:21.05:0,21,337	0/1:28,1:21:39.56:175,0,40	1/1:21,0:11:11.72:91,12,0	0/1:25,1:17:13.73:14,0,38	0/0:19,0:16:18.19:0,18,154	0/0:21,0:21:54.18:0,54,1005	0/0:26,0:20:45.05:0,45,805	0/0:16,0:14:22.38:0,22,415	0/1:23,1:16:32.40:113,0,32	1/1:30,3:21:15.51:148,16,0	./.
chr10	41033869	.	CTA	C	1416.60	PASS	AB=0.915;AC=8;AF=0.160;AN=50;BaseQRankSum=6.532;DP=656;FS=15.056;HRun=0;HaplotypeScore=147.2564;InbreedingCoeff=0.3604;MQ=41.76;MQ0=67;MQRankSum=-9.708;QD=7.34;ReadPosRankSum=-0.271;VQSLOD=2.3723;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:26:34.04:0,34,366	0/0:6,0:5:9.03:0,9,116	./.	./.	0/0:18,0:16:26.87:0,27,338	0/0:30,0:24:33.74:0,34,382	0/0:20,0:16:20.73:0,21,259	0/1:46,0:44:99:443,0,171	0/0:30,0:27:42.13:0,42,567	0/0:34,0:31:79.72:0,80,931	0/0:17,0:14:17.77:0,18,218	0/0:28,0:25:47.80:0,48,597	0/0:35,0:34:72.23:0,72,1079	0/0:23,0:23:39.08:0,39,532	0/0:36,0:33:65.98:0,66,741	0/0:31,0:30:57.02:0,57,699	0/0:21,0:17:31.62:0,32,402	0/0:14,0:12:17.44:0,17,168	0/1:30,6:26:66.90:354,0,67	1/1:15,6:10:9.02:103,9,0	0/1:24,3:17:48.09:61,0,48	0/0:19,0:16:14.75:0,15,223	0/0:23,0:23:59.72:0,60,706	0/0:26,0:20:38.71:0,39,531	0/0:16,0:14:18:0,18,205	0/1:25,2:20:30.21:301,0,30	1/1:25,10:23:17.80:293,18,0	./.
chr10	41033871	.	A	ATC	2535.92	PASS	AB=0.929;AC=8;AF=0.154;AN=52;BaseQRankSum=1.250;DP=655;FS=16.189;HRun=0;HaplotypeScore=145.3254;InbreedingCoeff=0.3510;MQ=41.37;MQ0=69;MQRankSum=-10.431;QD=12.94;ReadPosRankSum=-0.699;VQSLOD=2.3831;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:26:33.07:0,33,433	0/0:6,0:5:9.03:0,9,128	./.	./.	0/0:18,0:16:23.95:0,24,337	0/0:30,0:24:27.82:0,28,316	0/0:20,0:16:14.81:0,15,178	0/1:48,0:44:94.11:1028,0,94	0/0:29,0:26:36.12:0,36,514	0/0:34,0:31:79.02:0,79,1010	0/0:17,0:14:17.93:0,18,253	0/0:25,0:22:41.85:0,42,553	0/0:34,0:33:69.22:0,69,960	0/0:23,0:23:39.13:0,39,553	0/0:37,0:34:60.06:0,60,833	0/0:29,0:28:48.16:0,48,679	0/0:22,0:17:25.87:0,26,322	0/0:14,0:12:14.08:0,14,174	0/1:32,3:25:99:691,0,127	1/1:17,5:10:9.01:121,9,0	0/1:26,0:16:10.26:10,0,62	0/0:18,0:15:11.75:0,12,171	0/0:24,0:24:57.17:0,57,766	0/0:29,0:22:38.87:0,39,530	0/0:16,0:14:18:0,18,240	0/1:20,7:18:12.98:552,0,13	1/1:27,11:25:23.37:273,23,0	0/0:4,0:1:3:0,3,27
chr10	41033873	.	CTA	C	1895.71	PASS	AB=0.794;AC=8;AF=0.154;AN=52;BaseQRankSum=2.049;DP=659;FS=18.016;HRun=0;HaplotypeScore=144.0713;InbreedingCoeff=0.3265;MQ=41.25;MQ0=71;MQRankSum=-10.042;QD=9.67;ReadPosRankSum=0.668;VQSLOD=2.4008;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:27:35.82:0,36,394	0/0:6,0:5:9.03:0,9,118	./.	./.	0/0:17,0:15:23.86:0,24,296	0/0:29,0:23:29.84:0,30,338	0/0:20,0:16:14.65:0,15,177	0/1:23,25:44:99:1025,0,549	0/0:29,0:26:36.12:0,36,512	0/0:35,0:32:84.97:0,85,1103	0/0:18,0:15:17.80:0,18,253	0/0:26,0:23:44.74:0,45,530	0/0:37,0:35:69.22:0,69,1062	0/0:24,0:24:39.09:0,39,532	0/0:35,0:32:60.02:0,60,812	0/0:28,0:27:48.04:0,48,617	0/0:22,0:17:26.51:0,27,306	0/0:12,0:10:11.98:0,12,129	0/1:24,10:24:99:501,0,146	1/1:19,3:10:9:95,9,0	0/1:24,3:16:14.09:14,0,58	0/0:21,0:15:11.75:0,12,200	0/0:23,0:23:56.73:0,57,684	0/0:29,0:22:41.72:0,42,570	0/0:17,0:15:18:0,18,240	0/1:21,5:18:94.91:240,0,95	1/1:35,3:24:12.94:158,13,0	0/0:4,0:1:3.01:0,3,45
chr10	41033918	.	TATC	T	6675.73	PASS	AB=0.857;AC=41;AF=0.732;AN=56;BaseQRankSum=-3.523;DP=607;FS=3.119;HRun=0;HaplotypeScore=99.2301;InbreedingCoeff=0.5630;MQ=50.41;MQ0=60;MQRankSum=-2.835;QD=14.11;ReadPosRankSum=1.323;VQSLOD=4.7431;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:18:38.76:0,39,425	1/1:11,0:10:27.09:417,27,0	0/0:21,0:8:20.96:0,21,248	0/0:27,0:14:39.10:0,39,456	1/1:3,8:9:6.02:93,6,0	0/1:7,21:24:32.65:85,0,33	1/1:11,0:7:12.04:184,12,0	1/1:34,0:22:43.29:451,43,0	1/1:1,28:28:2.65:50,3,0	1/1:3,27:27:68.45:996,68,0	1/1:4,17:18:1.24:3,1,0	0/0:24,0:21:44.61:0,45,575	1/1:24,1:23:51.06:641,51,0	1/1:0,28:28:3.01:46,3,0	1/1:5,18:20:6.02:92,6,0	1/1:1,24:24:15.05:231,15,0	1/1:7,11:13:6.02:90,6,0	1/1:4,11:13:6.02:95,6,0	0/1:19,0:14:20.55:428,0,21	1/1:22,0:19:39.12:577,39,0	0/1:22,0:16:37.98:254,0,38	1/1:22,0:18:27.04:365,27,0	0/0:13,0:13:38.55:0,39,415	0/0:27,0:21:45.08:0,45,604	1/1:2,11:12:2.81:46,3,0	1/1:24,0:22:16.02:632,16,0	1/1:31,0:27:45.48:628,45,0	1/1:11,0:9:18.06:275,18,0
chr10	41033921	.	C	CT	6519.39	PASS	AB=0.724;AC=39;AF=0.696;AN=56;BaseQRankSum=-3.665;DP=590;FS=3.965;HRun=1;HaplotypeScore=85.8741;InbreedingCoeff=0.5824;MQ=52.76;MQ0=54;MQRankSum=-0.967;QD=15.09;ReadPosRankSum=1.966;VQSLOD=4.8312;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:16:39.09:0,39,509	1/1:2,9:10:27.06:373,27,0	0/0:26,0:12:13.65:0,14,271	0/0:27,0:14:39.11:0,39,462	1/1:11,0:9:5.72:36,6,0	0/1:26,0:22:32.70:65,0,33	1/1:4,8:8:11.98:176,12,0	1/1:7,17:12:30.10:439,30,0	1/1:30,0:29:2.98:26,3,0	1/1:28,0:26:67.79:874,68,0	0/0:20,0:17:0.85:0,1,2	0/0:25,0:22:44.83:0,45,564	1/1:4,23:25:51.17:774,51,0	1/1:28,0:28:2.90:16,3,0	1/1:23,0:20:5.91:62,6,0	1/1:26,0:25:17.73:163,18,0	1/1:18,0:13:5.99:67,6,0	1/1:14,0:12:5.99:49,6,0	0/1:1,14:12:5.79:471,0,6	1/1:2,20:19:39.11:552,39,0	0/1:9,11:16:19.35:244,0,19	1/1:1,21:18:26.92:403,27,0	0/0:14,0:14:39.13:0,39,525	0/0:26,0:21:45.08:0,45,624	1/1:13,0:12:2.96:46,3,0	1/1:2,21:21:26.48:745,26,0	1/1:0,27:24:46.04:676,46,0	1/1:2,9:9:18.06:264,18,0
chr10	41034616	.	C	CCCTT	11034.78	PASS	AB=1.000;AC=40;AF=0.714;AN=56;BaseQRankSum=8.054;DP=693;FS=26.573;HRun=0;HaplotypeScore=395.2567;InbreedingCoeff=-0.1117;MQ=56.61;MQ0=3;MQRankSum=-9.901;QD=16.62;ReadPosRankSum=0.964;VQSLOD=3.3106;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:26:99:200,0,284	1/1:11,0:11:1.40:81,1,0	0/0:17,0:16:14.53:0,15,191	0/0:12,0:11:23.16:0,23,254	1/1:46,0:46:70.87:987,71,0	1/1:28,0:28:26.48:647,26,0	0/1:18,0:18:18.09:248,0,18	0/1:39,0:33:98.75:99,0,536	1/1:15,0:15:2.57:430,3,0	1/1:32,0:32:7.88:964,8,0	1/1:20,0:20:42.85:581,43,0	0/1:34,0:33:99:224,0,307	1/1:18,0:18:44.52:769,45,0	1/1:13,0:13:5.84:130,6,0	1/1:16,18:34:14.19:216,14,0	1/1:25,0:25:25.25:522,25,0	1/1:18,0:18:12.55:436,13,0	1/1:12,0:12:30.13:407,30,0	0/1:27,0:26:99:129,0,359	0/1:34,0:34:99:320,0,271	0/1:23,0:21:53.32:53,0,304	1/1:21,0:21:45.26:698,45,0	0/1:46,0:46:99:514,0,272	0/1:21,0:20:89.22:89,0,93	1/1:38,0:38:74.77:1464,75,0	0/1:32,0:32:99:548,0,141	0/1:29,0:28:99:255,0,204	0/1:4,0:4:21.68:22,0,49
chr10	41034705	.	C	CCTAT	6084.07	PASS	AB=1.000;AC=31;AF=0.554;AN=56;BaseQRankSum=4.739;DP=443;FS=0.000;HRun=0;HaplotypeScore=510.9233;InbreedingCoeff=-0.3951;MQ=34.81;MQ0=0;MQRankSum=-6.319;QD=14.22;ReadPosRankSum=7.397;VQSLOD=2.6080;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:16,0:16:39.54:72,0,40	1/1:6,0:6:4.06:28,4,0	0/0:5,0:3:8.99:0,9,107	0/0:6,0:4:3.90:0,4,40	0/1:14,0:14:66.90:135,0,67	0/1:26,0:26:79.26:151,0,79	0/1:17,0:17:85.63:86,0,137	0/1:13,0:11:17:17,0,148	0/1:23,0:23:68.13:136,0,68	0/1:21,0:21:0.63:840,0,1	1/1:12,3:16:15.03:631,15,0	0/1:31,0:31:99:192,0,221	0/1:18,0:18:48.29:126,0,48	0/1:16,0:16:0.66:125,0,1	1/1:29,0:29:78.14:1626,78,0	1/1:23,0:23:4.94:197,5,0	0/1:13,0:13:83.45:83,0,96	1/1:3,1:4:8.92:173,9,0	0/1:18,0:18:45.21:125,0,45	0/1:15,0:15:79.33:130,0,79	0/1:11,0:10:28.50:29,0,103	0/1:12,0:12:9.61:109,0,10	0/1:13,0:13:60.08:72,0,60	0/1:18,0:17:52.29:52,0,188	1/1:14,1:15:35.14:610,35,0	0/1:18,0:17:74.35:159,0,74	0/1:22,0:21:97.95:179,0,98	0/0:4,0:4:8.13:0,8,45
chr10	41034968	.	GT	G	2731.06	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=8.125;DP=542;FS=11.049;HRun=8;HaplotypeScore=59.7375;InbreedingCoeff=0.9247;MQ=66.71;MQ0=3;MQRankSum=-0.481;QD=23.14;ReadPosRankSum=-0.951;VQSLOD=3.3274;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,1:25:40.25:0,40,756	0/0:7,0:7:21.06:0,21,254	0/0:26,0:17:18.06:0,18,300	0/0:19,0:10:16.88:0,17,210	0/0:36,0:36:93.28:0,93,1118	0/0:24,0:24:66.19:0,66,787	0/0:8,0:8:24.07:0,24,290	0/0:29,0:29:69.18:0,69,803	0/0:15,0:15:3.24:0,3,105	1/1:0,29:29:84.14:811,84,0	1/1:0,18:18:51.03:482,51,0	0/0:15,0:15:45.13:0,45,534	0/0:10,0:10:9.18:0,9,60	0/0:17,0:17:42.12:0,42,497	1/1:2,19:21:54.08:521,54,0	0/0:19,0:19:56.93:0,57,647	0/0:24,0:24:66.20:0,66,797	1/1:1,19:20:54.04:512,54,0	0/0:26,0:26:68.99:0,69,799	0/0:29,0:29:75.16:0,75,861	0/0:4,0:4:9.01:0,9,96	0/0:8,0:8:15.41:0,15,89	0/0:20,0:20:57.14:0,57,656	0/0:10,0:10:27.04:0,27,290	1/1:3,27:30:60.03:579,60,0	0/0:19,1:20:31.19:0,31,650	0/0:28,0:28:72.22:0,72,869	0/0:5,0:5:15.04:0,15,177
chr10	41035236	.	GGTATGCATTTGTGT	G	9694.82	PASS	AB=0.511;AC=13;AF=0.232;AN=56;BaseQRankSum=15.519;DP=777;FS=5.535;HRun=0;HaplotypeScore=309.8719;InbreedingCoeff=0.8930;MQ=70.43;MQ0=0;MQRankSum=-9.144;QD=65.51;ReadPosRankSum=-0.077;VQSLOD=3.6000;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,120,6057	0/0:8,0:8:24.08:0,24,1468	0/0:39,0:37:99:0,99,3741	0/0:25,0:24:57.19:0,57,3047	0/0:38,0:38:99:0,102,6411	0/0:23,0:23:60.20:0,60,3535	0/0:37,0:37:96.33:0,96,5201	1/1:4,23:26:66.15:1388,66,0	0/0:31,0:31:87.30:0,87,5424	0/0:46,0:46:99:0,132,8558	0/0:28,0:28:78.27:0,78,4382	0/0:30,0:30:84.29:0,84,4790	0/0:30,0:30:87.30:0,87,5350	0/0:23,0:23:63.22:0,63,3994	0/0:45,0:44:99:0,126,7355	0/0:41,0:41:99:0,102,5981	0/0:23,0:23:66.22:0,66,3469	0/0:25,0:25:69.21:0,69,4114	1/1:2,12:14:39.02:967,39,0	1/1:0,26:26:54.18:1937,54,0	1/1:5,24:29:15.05:502,15,0	0/0:26,0:26:78.25:0,78,4482	0/0:17,0:17:42.13:0,42,1805	0/0:25,0:25:69.14:0,69,3541	0/0:25,0:25:72.25:0,72,4422	0/1:1,22:23:99:2117,0,137	1/1:1,23:24:54.19:2167,54,0	1/1:0,5:5:15.05:616,15,0
chr10	41035868	.	AT	A	7033.49	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=13.197;DP=524;FS=3.480;HRun=8;HaplotypeScore=53.2748;InbreedingCoeff=0.9716;MQ=75.68;MQ0=0;MQRankSum=-1.815;QD=24.34;ReadPosRankSum=3.580;VQSLOD=5.6401;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:87.25:0,87,1038	1/1:2,6:8:12.02:116,12,0	0/0:10,0:10:6.18:0,6,157	0/0:12,0:11:10.59:0,11,203	1/1:2,26:28:81.12:778,81,0	1/1:0,16:16:42.07:406,42,0	1/1:0,20:20:48.08:463,48,0	0/0:30,0:30:78.23:0,78,932	1/1:0,16:16:33.05:319,33,0	1/1:0,25:25:75.12:723,75,0	1/1:2,17:19:51.08:492,51,0	0/0:17,0:17:48.11:0,48,555	1/1:0,22:22:60.10:579,60,0	1/1:2,17:19:42.06:406,42,0	1/1:2,16:18:39.06:377,39,0	1/1:3,15:18:39.06:377,39,0	1/1:1,27:28:72.11:695,72,0	1/1:1,10:11:30.04:290,30,0	0/0:13,0:13:39.12:0,39,471	0/0:27,0:27:75.22:0,75,894	0/0:11,0:11:33.09:0,33,386	1/1:1,22:23:60.09:579,60,0	0/0:18,0:18:48.14:0,48,567	0/0:14,0:14:39.12:0,39,471	1/1:1,17:18:45.07:435,45,0	0/0:28,0:28:72.21:0,72,860	0/0:20,0:20:48.15:0,48,580	0/0:4,0:4:12.02:0,12,132
chr10	41036865	.	A	ATTTGTCTTCTTT	23717.58	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=16.478;DP=462;FS=2.135;HRun=0;HaplotypeScore=201.6508;InbreedingCoeff=0.9590;MQ=93.47;MQ0=0;MQRankSum=-16.114;QD=157.07;ReadPosRankSum=8.256;VQSLOD=5.2834;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:75.26:0,75,2899	1/1:1,4:6:18.06:939,18,0	0/0:32,0:32:96.33:0,96,3431	0/0:24,0:24:68.04:0,68,2225	1/1:3,16:19:47.92:2838,48,0	1/1:3,10:13:36.04:1831,36,0	1/1:0,3:3:9.03:530,9,0	0/0:33,0:33:96.32:0,96,3572	1/1:0,11:11:33.11:1910,33,0	1/1:2,16:18:51.17:2845,51,0	1/1:2,7:9:19.22:1319,19,0	0/0:23,0:23:66.23:0,66,2519	1/1:0,13:13:39.13:2282,39,0	1/1:1,8:9:22.89:1239,23,0	1/1:0,11:11:33.11:1936,33,0	1/1:1,10:11:33.11:1815,33,0	1/1:0,2:2:6.02:349,6,0	1/1:2,1:3:5.38:186,5,0	0/0:27,0:26:81.26:0,81,3010	0/0:25,0:25:75.25:0,75,2668	0/0:19,0:19:57.20:0,57,2205	1/1:1,10:12:36.11:1942,36,0	0/0:23,0:23:69.24:0,69,2594	0/0:18,0:18:51.13:0,51,1826	1/1:1,10:11:30.10:1756,30,0	0/0:27,0:27:81.27:0,81,2853	0/0:25,0:24:72.25:0,72,2830	0/0:10,0:10:30.10:0,30,1188
chr10	41036868	.	T	TTACTC	21244.77	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=18.984;DP=589;FS=0.000;HRun=0;HaplotypeScore=277.1275;InbreedingCoeff=0.9992;MQ=84.45;MQ0=0;MQRankSum=-19.836;QD=75.60;ReadPosRankSum=5.334;VQSLOD=4.7883;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:75.26:0,75,1747	1/1:7,5:12:30.08:782,30,0	0/0:33,0:33:96.27:0,96,2119	0/0:24,0:24:68.46:0,68,1493	1/1:16,16:32:79.81:2461,80,0	1/1:14,10:24:31.47:1706,31,0	1/1:13,3:16:45.15:1229,45,0	0/0:32,0:32:96.32:0,96,2170	1/1:5,11:16:45.15:1232,45,0	1/1:15,16:31:90.31:2442,90,0	1/1:9,7:16:40.38:1079,40,0	0/0:22,0:22:63.22:0,63,1468	1/1:6,13:19:57.18:1539,57,0	1/1:11,7:19:51.18:1437,51,0	1/1:8,11:19:51.18:1437,51,0	1/1:10,10:20:60.21:1624,60,0	1/1:8,2:10:30.10:780,30,0	1/1:8,1:9:21.07:606,21,0	0/0:25,0:25:75.26:0,75,1748	0/0:24,0:24:69.22:0,69,1537	0/0:19,0:19:57.20:0,57,1313	1/1:7,10:17:45.15:1215,45,0	0/0:22,0:22:66.23:0,66,1538	0/0:17,0:17:48.15:0,48,1058	1/1:11,10:21:60.21:1674,60,0	0/0:30,0:30:87.25:0,87,1832	0/0:25,0:24:75.24:0,75,1693	0/0:10,0:10:30.10:0,30,699
chr10	41037271	.	TACACACAC	T	1083.57	PASS	AB=0.900;AC=13;AF=0.260;AN=50;BaseQRankSum=2.804;DP=473;FS=7.865;HRun=0;HaplotypeScore=120.7582;InbreedingCoeff=0.7307;MQ=69.94;MQ0=17;MQRankSum=-3.622;QD=10.03;ReadPosRankSum=2.811;VQSLOD=1.7589;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:28:17.89:0,18,545	0/0:7,0:7:6.02:0,6,237	./.	0/0:36,0:25:0.47:0,0,1	1/1:12,1:13:12.01:178,12,0	0/0:22,0:23:24.08:0,24,809	0/0:25,0:31:21.05:0,21,562	0/0:18,0:17:1.55:0,2,4	0/0:10,0:10:9.03:0,9,264	1/1:14,2:16:6.47:98,6,0	1/1:10,6:15:3.01:38,3,0	0/0:10,0:10:6.91:0,7,168	0/0:12,0:12:9:0,9,232	./.	1/1:8,6:14:8.55:222,9,0	1/1:8,3:12:11.93:238,12,0	1/1:24,2:27:19.56:437,20,0	0/1:8,1:9:0.29:32,0,0	0/0:10,0:11:15.05:0,15,474	0/0:17,0:20:15.05:0,15,540	0/0:18,0:16:12.04:0,12,380	0/0:15,0:14:21.07:0,21,801	0/0:11,0:11:15.05:0,15,576	0/0:21,0:23:24.08:0,24,686	./.	0/0:20,0:18:28.65:0,29,940	0/0:15,0:15:21.07:0,21,694	0/0:4,0:4:9.03:0,9,329
chr10	41037351	.	A	AT	4919.95	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=2.882;DP=489;FS=2.791;HRun=7;HaplotypeScore=79.1620;InbreedingCoeff=0.9881;MQ=72.86;MQ0=0;MQRankSum=-0.386;QD=28.28;ReadPosRankSum=0.680;VQSLOD=5.4356;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:57.09:0,57,548	0/0:7,0:7:16.43:0,16,73	0/0:9,0:9:17.51:0,18,166	0/0:16,0:15:17.61:0,18,220	1/1:3,23:26:63.16:737,63,0	1/1:1,19:21:54:625,54,0	1/1:4,15:19:32.91:493,33,0	0/0:20,0:20:48.05:0,48,456	1/1:5,9:15:33.07:374,33,0	0/0:16,0:16:33.38:0,33,146	0/0:18,0:18:45.59:0,46,197	0/0:10,0:10:27.04:0,27,261	1/1:0,13:14:39.10:457,39,0	1/1:2,18:20:45.14:541,45,0	0/0:17,0:17:37.90:0,38,181	1/1:3,14:17:36.11:433,36,0	1/1:1,23:24:63.19:757,63,0	0/0:18,0:18:41.54:0,42,202	0/0:16,0:16:45.02:0,45,425	0/0:23,0:23:60.09:0,60,578	0/0:17,0:16:39.05:0,39,372	1/1:2,16:18:42.13:504,42,0	0/0:22,0:22:60.08:0,60,574	0/0:21,0:21:54.07:0,54,517	0/0:14,0:14:12.41:0,12,126	0/0:25,0:25:59.07:0,59,539	0/0:19,0:19:57.08:0,57,544	0/0:5,0:5:15.02:0,15,145
chr10	41040172	.	G	GGA	1938.04	PASS	AB=1.000;AC=47;AF=0.940;AN=50;BaseQRankSum=-0.634;DP=548;FS=8.804;HRun=0;HaplotypeScore=113.3725;InbreedingCoeff=0.2333;MQ=71.16;MQ0=10;MQRankSum=0.977;QD=4.25;ReadPosRankSum=0.086;VQSLOD=2.2109;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:20:14.70:164,15,0	1/1:16,0:16:12:115,12,0	./.	./.	1/1:28,0:28:6.02:81,6,0	1/1:33,0:32:6.02:83,6,0	1/1:14,1:21:6.01:70,6,0	1/1:28,0:28:12.80:96,13,0	1/1:12,4:16:15.04:201,15,0	1/1:22,0:23:26.46:254,26,0	1/1:9,0:9:2.98:21,3,0	1/1:16,3:19:3.01:44,3,0	1/1:17,0:17:5.98:62,6,0	1/1:18,0:18:2.94:18,3,0	1/1:17,0:17:9:88,9,0	1/1:6,0:6:2.99:23,3,0	1/1:25,0:25:8.95:69,9,0	1/1:16,1:16:8.99:100,9,0	1/1:17,0:15:5.85:57,6,0	1/1:21,0:20:3:29,3,0	0/1:10,0:10:0.04:0,0,0	1/1:15,0:15:3:25,3,0	0/0:14,0:15:5.68:0,6,28	1/1:13,6:21:14.95:220,15,0	1/1:26,0:26:8.97:73,9,0	1/1:19,0:19:15.40:100,15,0	./.	1/1:13,0:12:4.89:37,5,0
chr10	41043299	.	TC	T	3491.08	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=10.811;DP=712;FS=5.304;HRun=1;HaplotypeScore=69.2355;InbreedingCoeff=0.9916;MQ=91.99;MQ0=0;MQRankSum=-3.119;QD=36.37;ReadPosRankSum=3.224;VQSLOD=4.1862;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,123,1917	0/0:10,0:10:30.10:0,30,479	0/0:33,0:33:96.24:0,96,1428	0/0:26,0:26:73.45:0,73,1088	1/1:0,26:26:75.22:1022,75,0	0/0:30,0:30:90.29:0,90,1414	0/0:21,0:21:63.17:0,63,934	0/0:36,0:36:99:0,102,1631	0/0:22,0:22:66.21:0,66,1024	0/0:29,0:29:87.29:0,87,1371	0/0:21,0:21:63.17:0,63,933	0/0:29,0:29:87.28:0,87,1363	0/0:27,0:27:81.28:0,81,1292	1/1:0,24:24:63.21:881,63,0	0/0:27,0:27:81.28:0,81,1293	1/1:1,22:23:12.26:749,12,0	1/1:0,23:23:60.20:839,60,0	0/0:21,0:21:60.19:0,60,927	0/0:26,0:26:72.24:0,72,1125	0/0:31,0:31:93.32:0,93,1486	0/0:25,0:25:71.89:0,72,1104	0/0:28,0:28:84.27:0,84,1317	0/0:18,0:18:54.16:0,54,817	0/0:25,0:25:75.19:0,75,1098	0/0:26,0:26:78.25:0,78,1211	0/0:21,0:21:63.19:0,63,960	0/0:32,0:32:96.27:0,96,1437	0/0:11,0:11:33.11:0,33,526
chr10	41043697	.	A	AT	21067.24	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=11.101;DP=697;FS=1.820;HRun=1;HaplotypeScore=105.4560;InbreedingCoeff=0.9979;MQ=93.17;MQ0=0;MQRankSum=-7.510;QD=40.59;ReadPosRankSum=2.960;VQSLOD=4.9268;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,138,1908	1/1:1,6:7:18.04:273,18,0	0/0:24,0:24:66.18:0,66,835	0/0:35,0:35:99:0,102,1197	1/1:0,23:23:63.21:944,63,0	1/1:0,12:12:33.11:497,33,0	1/1:0,26:26:66.22:991,66,0	1/1:2,23:25:66.01:958,66,0	1/1:0,26:26:69.23:1034,69,0	1/1:0,35:36:99:1588,108,0	1/1:0,23:23:63.21:944,63,0	0/0:34,0:34:99:0,102,1426	1/1:1,12:13:36.08:539,36,0	1/1:0,25:26:72.24:1076,72,0	1/1:0,23:23:63.21:945,63,0	1/1:0,21:21:60.20:898,60,0	1/1:0,29:29:72.24:1080,72,0	1/1:0,18:17:48.16:718,48,0	1/1:0,26:26:78.24:1149,78,0	1/1:1,33:34:87.24:1307,87,0	1/1:0,38:38:99:1653,111,0	1/1:0,28:28:78.26:1158,78,0	0/0:21,0:21:63.20:0,63,864	0/0:18,0:18:50.87:0,51,711	1/1:2,21:23:51.08:763,51,0	1/1:1,21:22:63.13:934,63,0	1/1:0,31:31:84.28:1259,84,0	1/1:0,9:9:24.08:360,24,0
chr10	41044041	.	T	TC	2385.96	PASS	AB=0.957;AC=17;AF=0.304;AN=56;BaseQRankSum=5.198;DP=612;FS=9.459;HRun=0;HaplotypeScore=105.8608;InbreedingCoeff=0.2148;MQ=69.51;MQ0=0;MQRankSum=-0.109;QD=7.53;ReadPosRankSum=-1.224;VQSLOD=2.8433;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:66.19:0,66,867	0/0:17,0:17:1:0,1,57	0/0:20,0:19:2.62:0,3,401	0/0:10,0:10:24.54:0,25,300	0/1:35,0:35:35.21:35,0,76	0/0:15,0:15:24.11:0,24,63	0/0:21,0:21:10.96:0,11,65	0/1:23,0:23:13.56:37,0,14	0/1:18,0:18:28.24:44,0,28	1/1:15,13:28:48.01:516,48,0	1/1:11,20:31:20.14:508,20,0	0/0:25,0:25:75.18:0,75,975	0/0:18,0:18:1.96:0,2,41	0/1:26,0:26:51.34:51,0,56	1/1:12,8:20:18.90:324,19,0	0/1:20,0:20:37.94:62,0,38	0/0:24,0:24:37.57:0,38,108	0/1:11,13:24:1.97:332,0,2	0/1:10,0:10:3.16:40,0,3	0/0:23,0:23:22:0,22,124	0/0:16,0:16:1.04:0,1,33	0/1:26,0:26:25.39:25,0,69	0/0:23,0:23:66.18:0,66,852	0/0:16,0:16:48.16:0,48,666	1/1:13,18:31:45.51:565,46,0	0/1:24,1:25:20.78:21,0,26	0/0:27,0:27:25.19:0,25,102	0/0:18,0:18:33.73:0,34,100
chr10	41044042	.	T	TTC	2302.16	PASS	AB=0.711;AC=6;AF=0.107;AN=56;BaseQRankSum=8.018;DP=609;FS=4.278;HRun=0;HaplotypeScore=118.1799;InbreedingCoeff=-0.1168;MQ=70.26;MQ0=0;MQRankSum=-1.368;QD=16.33;ReadPosRankSum=-0.035;VQSLOD=3.3968;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:66.19:0,66,949	0/0:16,0:16:47.26:0,47,321	0/0:20,0:19:28.46:0,28,446	0/0:11,0:11:21.17:0,21,315	0/0:35,0:35:99:0,101,663	0/0:15,0:15:44.36:0,44,289	0/0:21,0:21:57.97:0,58,382	0/0:24,0:24:2.62:0,3,245	0/0:17,0:17:24.51:0,25,271	0/1:15,13:28:28.91:492,0,29	0/1:11,20:31:81.30:589,0,81	0/0:25,0:25:75.23:0,75,1082	0/0:18,0:18:50.29:0,50,331	0/0:26,0:26:30.27:0,30,427	0/1:12,8:20:31.05:331,0,31	0/0:21,0:21:55.07:0,55,366	0/0:24,0:24:49.12:0,49,424	0/1:9,13:22:33.50:430,0,33	0/1:9,0:9:0.31:0,0,109	0/0:23,0:23:48.25:0,48,428	0/0:16,0:16:19.60:0,20,245	0/0:25,0:25:46.19:0,46,437	0/0:22,0:22:63.19:0,63,905	0/0:16,0:16:48.16:0,48,734	0/1:13,18:31:46.51:576,0,47	0/0:24,1:25:37.06:0,37,356	0/0:27,0:27:29.23:0,29,417	0/0:18,0:18:47.47:0,47,328
chr10	41044163	.	CT	C	9640.45	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=6.984;DP=554;FS=4.101;HRun=8;HaplotypeScore=60.8511;InbreedingCoeff=0.9212;MQ=76.31;MQ0=3;MQRankSum=-1.596;QD=24.04;ReadPosRankSum=2.706;VQSLOD=5.8215;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:69.21:0,69,832	1/1:2,5:7:15.02:145,15,0	0/0:33,1:29:8.89:0,9,559	0/0:17,0:11:2.50:0,3,160	1/1:2,18:20:51.08:492,51,0	1/1:1,12:13:33.05:319,33,0	1/1:1,12:13:33.05:319,33,0	1/1:5,19:24:57.05:542,57,0	1/1:3,25:28:69.10:666,69,0	1/1:3,21:24:60.08:575,60,0	1/1:1,14:15:36.05:348,36,0	0/0:27,0:27:72.22:0,72,867	1/1:1,14:15:39.06:376,39,0	1/1:1,17:18:51.08:492,51,0	1/1:3,20:23:48.07:464,48,0	1/1:0,18:18:45.07:435,45,0	1/1:3,25:28:75.12:724,75,0	1/1:1,16:17:8.86:369,9,0	1/1:2,11:13:33.03:312,33,0	1/1:2,15:17:45.07:435,45,0	1/1:1,12:13:33.05:319,33,0	1/1:3,15:18:42.06:403,42,0	0/0:24,0:24:69.20:0,69,823	0/0:23,0:23:69.21:0,69,833	1/1:3,27:30:75.12:724,75,0	1/1:2,19:21:57.07:544,57,0	1/1:3,20:23:57.08:550,57,0	1/1:0,3:3:9.01:87,9,0
chr10	41044707	.	AT	A	12036.36	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=9.938;DP=528;FS=12.743;HRun=6;HaplotypeScore=82.1619;InbreedingCoeff=0.9712;MQ=67.93;MQ0=0;MQRankSum=-2.395;QD=27.73;ReadPosRankSum=2.252;VQSLOD=4.4798;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:57.17:0,57,735	1/1:1,12:13:36.09:387,36,0	0/0:5,0:5:12.03:0,12,148	0/0:11,0:11:21.04:0,21,230	1/1:5,31:36:87.22:933,87,0	1/1:0,20:20:51.13:548,51,0	1/1:2,16:18:42.11:451,42,0	1/1:0,23:23:69.14:724,69,0	1/1:0,16:16:45.11:483,45,0	1/1:1,33:34:99:1042,99,0	1/1:1,17:18:42.10:451,42,0	0/0:16,0:16:48.16:0,48,632	1/1:1,14:15:30.07:322,30,0	1/1:0,15:15:39.10:418,39,0	1/1:1,18:19:51.13:548,51,0	1/1:0,12:12:33.08:355,33,0	1/1:0,11:11:33.08:355,33,0	1/1:1,9:10:24.06:258,24,0	1/1:4,23:27:66.08:668,66,0	1/1:2,23:25:66.16:709,66,0	1/1:3,3:6:6.01:64,6,0	1/1:1,18:19:51.13:548,51,0	0/0:19,0:19:54.09:0,54,702	0/0:22,0:21:60.20:0,60,789	1/1:1,22:23:63.16:677,63,0	1/1:1,29:30:87.22:935,87,0	1/1:2,27:29:75.19:805,75,0	1/1:0,15:15:33.08:355,33,0
chr10	41044769	.	ACGTT	A	3708.57	PASS	AB=0.997;AC=26;AF=0.464;AN=56;BaseQRankSum=13.600;DP=478;FS=1.622;HRun=0;HaplotypeScore=196.8305;InbreedingCoeff=-0.0925;MQ=60.39;MQ0=0;MQRankSum=-11.037;QD=10.42;ReadPosRankSum=3.595;VQSLOD=3.2275;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:38.90:0,39,889	0/1:6,0:6:3.95:61,0,4	0/0:16,0:12:33.11:0,33,713	0/0:16,0:12:35.69:0,36,847	1/1:21,1:22:54.74:564,55,0	0/1:19,0:19:21.70:171,0,22	0/1:9,0:9:5.06:5,0,57	0/1:27,0:27:99:160,0,106	0/1:13,0:12:29.56:91,0,30	0/1:32,0:32:97.20:97,0,568	0/1:16,0:16:99:130,0,164	0/0:13,0:13:39.12:0,39,978	0/1:16,0:16:28.23:28,0,97	1/1:9,5:14:27.51:365,28,0	0/1:14,0:14:87.94:88,0,99	1/1:14,0:14:40.41:450,40,0	1/1:8,0:8:23.60:273,24,0	0/0:10,0:10:13.29:0,13,325	0/1:12,0:11:29.84:64,0,30	0/1:20,0:21:44.83:148,0,45	0/1:6,0:6:11.70:19,0,12	0/1:16,0:15:5.49:148,0,5	0/0:34,0:34:82.41:0,82,2587	0/0:20,0:19:58.08:0,58,1595	0/1:21,0:21:99:175,0,231	0/1:25,0:25:66.57:281,0,67	0/1:32,0:32:29.09:229,0,29	1/1:13,0:13:16.67:161,17,0
chr10	41044770	.	CGTTCTTTTTTTG	C	10177.20	PASS	AB=1.000;AC=26;AF=0.464;AN=56;BaseQRankSum=12.293;DP=474;FS=5.597;HRun=0;HaplotypeScore=251.3018;InbreedingCoeff=-0.0279;MQ=60.40;MQ0=0;MQRankSum=-10.868;QD=30.56;ReadPosRankSum=4.376;VQSLOD=3.7104;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:41.97:0,42,1889	0/1:6,0:6:17.12:89,0,17	0/0:16,0:12:33.11:0,33,1128	0/0:16,0:12:35.71:0,36,1467	1/1:9,9:22:54.62:960,55,0	1/1:19,0:19:34.37:1123,34,0	0/1:9,0:9:29.14:99,0,29	0/1:25,0:25:99:277,0,125	0/0:13,0:12:6.21:0,6,303	0/1:32,0:32:99:781,0,177	1/1:16,0:16:7.67:814,8,0	0/0:13,0:13:39.12:0,39,1725	0/0:16,0:16:27.63:0,28,448	1/1:9,4:14:40.88:713,41,0	0/1:14,0:14:40.04:593,0,40	1/1:3,9:14:41.92:988,42,0	1/1:3,2:8:24.08:461,24,0	0/1:10,0:10:56.48:56,0,115	0/1:12,0:11:39.91:88,0,40	0/1:20,0:20:59.01:346,0,59	0/1:6,0:6:30.76:50,0,31	0/1:15,0:14:30.47:30,0,167	0/0:33,0:33:63.37:0,63,5491	0/0:20,0:19:59.01:0,59,3277	0/1:21,0:21:97.46:1068,0,97	0/1:25,0:25:26.61:767,0,27	0/1:32,0:32:99:582,0,105	0/1:13,0:13:40.62:289,0,41
chr10	41044773	.	TC	T	5518.45	PASS	AB=0.760;AC=42;AF=0.750;AN=56;BaseQRankSum=12.442;DP=465;FS=0.391;HRun=1;HaplotypeScore=160.6509;InbreedingCoeff=0.7834;MQ=59.16;MQ0=0;MQRankSum=-9.586;QD=15.95;ReadPosRankSum=1.050;VQSLOD=4.9412;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:39.08:0,39,511	1/1:3,0:6:14.87:108,15,0	0/0:16,0:11:29.95:0,30,331	0/0:23,0:14:39.02:0,39,507	1/1:22,0:22:50.91:281,51,0	1/1:4,14:18:51.20:328,51,0	1/1:6,3:9:17.48:102,17,0	1/1:14,5:23:57.42:460,57,0	1/1:8,4:11:20.36:188,20,0	0/1:20,10:30:12.32:299,0,12	1/1:4,12:16:11.46:234,11,0	0/0:12,0:12:36.09:0,36,478	1/1:15,1:16:19.99:186,20,0	1/1:13,0:13:18.23:135,18,0	1/1:4,9:13:15.16:221,15,0	1/1:14,0:14:35.76:213,36,0	1/1:8,0:8:22.17:125,22,0	0/1:7,3:10:40.05:40,0,59	1/1:9,2:11:31.12:259,31,0	1/1:11,1:19:50.07:370,50,0	1/1:4,2:6:14.68:106,15,0	1/1:7,5:12:35.35:275,35,0	0/0:32,0:32:76.73:0,77,1307	0/0:21,0:20:61.09:0,61,858	1/1:6,14:20:7.85:248,8,0	1/1:10,1:23:55.88:433,56,0	1/1:15,6:30:83.60:608,84,0	1/1:8,0:13:38.77:301,39,0
chr10	41044779	.	TTTGTTTTTTTTTG	T	11399.45	PASS	AB=0.947;AC=33;AF=0.589;AN=56;BaseQRankSum=11.868;DP=471;FS=0.000;HRun=0;HaplotypeScore=253.1136;InbreedingCoeff=0.4301;MQ=57.61;MQ0=1;MQRankSum=-11.389;QD=36.42;ReadPosRankSum=5.180;VQSLOD=3.8214;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:36.12:0,36,2008	0/1:6,0:6:36.69:76,0,37	0/0:16,0:9:27.06:0,27,788	0/0:25,0:16:41.11:0,41,1264	1/1:23,0:23:25.36:775,25,0	1/1:19,0:19:57.19:1810,57,0	1/1:9,0:9:4.16:353,4,0	0/1:20,0:20:12.41:257,0,12	0/0:14,0:13:19.25:0,19,413	1/1:19,10:29:14.14:1034,14,0	1/1:3,12:15:32.65:1027,33,0	0/0:13,0:13:36.10:0,36,1611	0/0:20,0:21:36.94:0,37,606	1/1:13,0:13:27.79:616,28,0	1/1:3,8:11:6.19:734,6,0	1/1:14,0:14:27.10:870,27,0	1/1:8,0:8:21.01:382,21,0	0/1:6,3:9:21.34:139,0,21	1/1:10,0:9:7.74:65,8,0	0/1:21,0:21:35.42:310,0,35	0/1:6,0:6:19.80:30,0,20	0/1:13,0:14:4.37:4,0,315	0/0:34,0:34:99:0,99,5564	0/0:22,0:21:66.22:0,66,3501	1/1:7,13:20:21.57:1352,22,0	1/1:23,1:24:12.46:789,12,0	0/1:29,0:29:26.96:502,0,27	1/1:12,0:12:0.98:274,1,0
chr10	41044780	.	TTGTTTTTTTTTG	T	11473.89	PASS	AB=0.970;AC=35;AF=0.625;AN=56;BaseQRankSum=12.279;DP=464;FS=1.214;HRun=0;HaplotypeScore=238.6665;InbreedingCoeff=0.4624;MQ=57.61;MQ0=2;MQRankSum=-9.843;QD=35.74;ReadPosRankSum=3.561;VQSLOD=4.3894;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:36.12:0,36,1879	0/1:8,0:8:64.31:113,0,64	0/0:16,0:9:24.07:0,24,749	0/0:26,0:16:25.72:0,26,1259	1/1:22,0:22:46.06:593,46,0	1/1:5,14:19:57.14:1432,57,0	1/1:7,2:9:3.39:219,3,0	1/1:15,0:20:29.58:464,30,0	0/1:14,0:13:12.05:12,0,297	1/1:26,0:26:0.46:950,0,0	1/1:15,0:15:24.52:964,25,0	0/0:13,0:13:36.11:0,36,1519	0/0:20,0:20:21.17:0,21,442	1/1:13,0:13:12.12:465,12,0	0/1:11,0:11:1.61:688,0,2	1/1:13,0:13:22.21:713,22,0	1/1:8,0:8:20.89:292,21,0	0/1:9,0:9:34.57:123,0,35	0/1:8,0:8:3.16:129,0,3	1/1:19,0:19:2.74:526,3,0	1/1:4,0:6:10.66:110,11,0	0/1:14,0:14:74.48:74,0,207	0/0:33,0:33:99:0,99,5215	0/0:22,0:21:66.19:0,66,3298	0/1:19,1:20:0.32:1239,0,0	1/1:24,0:24:37.93:1060,38,0	1/1:26,0:29:40.23:895,40,0	1/1:12,0:12:13.08:414,13,0
chr10	41044781	.	TG	T	4588.75	PASS	AB=0.995;AC=39;AF=0.696;AN=56;BaseQRankSum=12.133;DP=464;FS=0.000;HRun=1;HaplotypeScore=163.8361;InbreedingCoeff=0.4378;MQ=56.23;MQ0=2;MQRankSum=-7.874;QD=12.54;ReadPosRankSum=0.856;VQSLOD=3.5177;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:35.97:0,36,407	1/1:8,0:8:10.84:152,11,0	0/0:17,0:9:16.87:0,17,200	0/1:24,1:15:2.88:3,0,196	1/1:19,1:21:39.64:246,40,0	1/1:19,0:19:36.74:201,37,0	1/1:9,0:9:7.57:44,8,0	1/1:21,0:21:40.17:372,40,0	1/1:10,4:13:31.58:252,32,0	0/1:26,0:26:79.44:79,0,250	0/1:15,0:15:65.11:110,0,65	0/0:12,0:12:35.98:0,36,359	1/1:19,0:19:41.01:309,41,0	1/1:7,5:12:2.01:128,2,0	0/1:11,0:11:5.11:80,0,5	1/1:13,0:13:25.20:171,25,0	1/1:7,0:7:17.15:103,17,0	0/1:9,0:9:12.67:13,0,137	1/1:8,1:8:22.40:171,22,0	1/1:17,0:18:50.37:367,50,0	1/1:7,0:7:5.92:94,6,0	1/1:13,2:14:41.17:326,41,0	0/0:34,0:34:99:0,102,1156	0/0:22,0:21:49.57:0,50,720	0/1:20,0:20:65.62:146,0,66	0/1:27,0:27:0.49:379,0,0	1/1:26,2:29:67.80:560,68,0	1/1:12,0:12:35.84:283,36,0
chr10	41044786	.	TTTTTTG	T	5033.26	PASS	AB=0.978;AC=33;AF=0.589;AN=56;BaseQRankSum=12.677;DP=465;FS=3.039;HRun=0;HaplotypeScore=194.9371;InbreedingCoeff=0.1208;MQ=52.21;MQ0=2;MQRankSum=-10.311;QD=14.63;ReadPosRankSum=6.678;VQSLOD=3.8247;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:36.12:0,36,1085	1/1:7,0:7:17.04:166,17,0	0/0:18,0:9:26.04:0,26,419	0/0:24,0:13:38.76:0,39,777	0/1:25,0:25:38.58:124,0,39	1/1:23,0:23:18.29:514,18,0	0/1:8,0:8:26.76:27,0,65	1/1:19,0:19:6.14:185,6,0	0/1:10,3:12:30.09:176,0,30	0/1:23,0:23:98.03:371,0,98	0/1:22,0:22:36:397,0,36	0/0:12,0:12:33.10:0,33,846	0/1:18,1:19:59.97:112,0,60	0/1:16,0:16:62.13:133,0,62	0/1:12,0:12:7.76:274,0,8	1/1:10,0:10:24.72:268,25,0	0/1:7,0:7:11.84:93,0,12	0/1:8,0:8:27.40:27,0,66	1/1:6,0:5:8.48:64,8,0	1/1:17,0:17:11.44:256,11,0	1/1:7,0:7:2.42:10,2,0	1/1:13,2:14:0.12:163,0,0	0/0:32,0:32:96.32:0,96,2943	0/0:22,0:21:37.01:0,37,1852	0/1:20,0:20:22.69:526,0,23	1/1:30,0:30:25.72:538,26,0	1/1:27,0:27:28.19:381,28,0	1/1:10,0:10:14.87:227,15,0
chr10	41044790	.	TTG	T	5305.54	PASS	AB=1.000;AC=42;AF=0.750;AN=56;BaseQRankSum=9.214;DP=467;FS=7.118;HRun=0;HaplotypeScore=155.2885;InbreedingCoeff=0.8155;MQ=53.44;MQ0=2;MQRankSum=-8.827;QD=15.42;ReadPosRankSum=-0.667;VQSLOD=4.3862;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:39.09:0,39,588	1/1:7,0:7:16.55:120,17,0	0/0:20,0:11:19.91:0,20,256	0/0:25,0:14:23.44:0,23,347	1/1:26,0:26:35.67:247,36,0	1/1:23,0:23:61.08:507,61,0	1/1:9,0:9:15.42:139,15,0	1/1:15,4:19:28.26:180,28,0	0/1:14,0:13:4.24:175,0,4	1/1:23,0:23:47.78:409,48,0	1/1:21,0:21:50.78:400,51,0	0/0:10,0:10:30.10:0,30,462	1/1:17,1:18:10.07:242,10,0	1/1:16,0:16:22.99:152,23,0	1/1:16,0:16:41.85:337,42,0	1/1:10,0:10:18.76:124,19,0	1/1:7,0:7:14.96:92,15,0	1/1:9,0:9:14.94:115,15,0	1/1:8,1:8:15.67:130,16,0	1/1:10,5:15:33.94:242,34,0	1/1:7,0:7:8.67:51,9,0	0/1:15,0:14:5.82:192,0,6	0/0:32,0:32:93.29:0,93,1513	0/0:22,0:21:43.03:0,43,889	1/1:18,0:18:47.90:398,48,0	1/1:17,12:29:52.02:521,52,0	1/1:17,9:26:51.77:389,52,0	1/1:2,5:7:15.90:142,16,0
chr10	41044791	.	TG	T	5451.48	PASS	AB=1.000;AC=42;AF=0.750;AN=56;BaseQRankSum=8.430;DP=440;FS=7.883;HRun=1;HaplotypeScore=136.3130;InbreedingCoeff=0.7538;MQ=54.44;MQ0=2;MQRankSum=-8.562;QD=16.98;ReadPosRankSum=-1.098;VQSLOD=4.2206;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:39.08:0,39,477	1/1:4,3:7:20.79:155,21,0	0/0:17,0:10:13.29:0,13,196	0/0:26,0:15:3.20:0,3,245	1/1:14,10:24:48.44:353,48,0	1/1:21,0:21:56.88:389,57,0	1/1:6,0:6:14.90:109,15,0	1/1:20,0:20:39.47:269,39,0	0/1:14,0:13:6.28:167,0,6	1/1:17,0:17:47.30:337,47,0	1/1:20,0:20:50.24:331,50,0	0/0:10,0:10:30.10:0,30,384	1/1:18,0:18:6.02:247,6,0	1/1:11,3:14:28.19:197,28,0	1/1:14,0:14:41.58:305,42,0	1/1:3,8:11:31.07:227,31,0	1/1:3,2:5:14.95:121,15,0	1/1:8,0:8:14.89:108,15,0	1/1:8,1:8:18.18:147,18,0	1/1:13,2:15:44.12:314,44,0	1/1:6,0:6:9.87:64,10,0	0/1:15,0:14:13.28:175,0,13	0/0:31,0:31:93.29:0,93,1209	0/0:21,0:20:56.49:0,56,709	1/1:16,0:16:47.26:312,47,0	1/1:28,1:29:73.93:557,74,0	1/1:25,0:25:55.55:420,56,0	1/1:7,0:7:17.97:145,18,0
chr10	41046820	.	GTATGTATGTATA	G	7716.15	PASS	AB=0.993;AC=31;AF=0.554;AN=56;BaseQRankSum=4.132;DP=694;FS=2.496;HRun=0;HaplotypeScore=238.6969;InbreedingCoeff=0.2746;MQ=53.74;MQ0=7;MQRankSum=-6.345;QD=16.04;ReadPosRankSum=1.793;VQSLOD=3.9653;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:68.71:0,69,1473	0/0:8,0:8:9.38:0,9,81	0/0:11,0:10:11.91:0,12,94	0/1:11,0:9:2.29:2,0,39	0/0:21,0:20:0.51:0,1,1	0/1:37,0:37:99:179,0,1898	0/1:22,0:22:99:121,0,724	0/0:49,0:41:20.24:0,20,581	1/1:3,18:21:6.02:160,6,0	1/1:25,7:31:84.10:1818,84,0	1/1:1,18:19:18.06:350,18,0	0/0:29,0:29:62.10:0,62,1594	1/1:1,25:25:11.79:377,12,0	1/1:26,0:25:8.01:34,8,0	1/1:6,23:27:18.06:627,18,0	1/1:25,0:24:10.47:45,10,0	1/1:23,0:22:11.60:161,12,0	1/1:9,0:9:11.82:193,12,0	0/1:23,0:19:37:73,0,37	0/1:27,0:27:99:221,0,189	0/1:37,0:37:18.59:19,0,155	1/1:3,12:15:3.01:53,3,0	0/0:20,0:20:41.12:0,41,1485	0/0:28,0:28:31.20:0,31,1107	1/1:0,38:38:42.14:1397,42,0	0/1:37,0:37:99:1277,0,178	0/1:13,1:13:29.90:346,0,30	0/1:10,0:10:15.56:264,0,16
chr10	41046824	.	GTATGTATA	G	5570.66	PASS	AB=1.000;AC=33;AF=0.589;AN=56;BaseQRankSum=6.832;DP=688;FS=3.654;HRun=0;HaplotypeScore=212.2361;InbreedingCoeff=0.2966;MQ=53.94;MQ0=7;MQRankSum=-6.289;QD=11.73;ReadPosRankSum=1.578;VQSLOD=3.6278;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:68.87:0,69,1111	0/1:9,0:9:36.96:103,0,37	0/0:10,0:9:11.91:0,12,94	0/1:11,0:9:2.31:2,0,39	1/1:4,18:21:5.23:106,5,0	0/1:36,0:36:99:224,0,1173	0/1:23,0:23:99:138,0,438	0/0:46,0:38:43.69:0,44,608	1/1:20,0:20:5.93:77,6,0	1/1:32,0:31:87.07:1289,87,0	1/1:19,0:19:17.51:141,18,0	0/0:28,0:28:62.09:0,62,1191	1/1:26,0:25:11.75:201,12,0	1/1:2,24:25:12.02:298,12,0	1/1:28,0:26:18.06:348,18,0	1/1:2,25:26:14.88:382,15,0	1/1:22,1:22:35.95:434,36,0	1/1:8,0:8:14.70:128,15,0	0/1:22,0:18:34.10:44,0,34	0/1:28,0:28:82.30:82,0,189	0/0:34,0:34:32.31:0,32,248	1/1:13,0:13:2.92:17,3,0	0/0:21,0:21:41.59:0,42,1053	0/0:28,0:28:31.27:0,31,803	1/1:38,0:38:41.97:768,42,0	0/1:38,0:38:99:560,0,219	0/1:16,0:14:30.06:160,0,30	0/1:10,0:10:65.39:65,0,77
chr10	41046832	.	A	ATATG	1936.68	PASS	AB=0.994;AC=19;AF=0.396;AN=48;BaseQRankSum=-8.661;DP=663;FS=1.644;HRun=0;HaplotypeScore=191.7416;InbreedingCoeff=0.3891;MQ=53.10;MQ0=9;MQRankSum=5.495;QD=6.09;ReadPosRankSum=-2.492;VQSLOD=2.4597;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:22,21:44:24.05:496,24,0	0/0:2,0:9:6:0,6,56	./.	./.	1/1:20,0:19:0.46:1,0,0	0/1:32,0:33:49.31:49,0,346	0/1:23,0:23:7.51:8,0,127	./.	0/0:18,0:18:1.82:0,2,5	0/1:36,0:35:50.69:51,0,174	0/0:20,0:20:1.82:0,2,5	1/1:15,19:34:21.07:495,21,0	0/0:25,0:24:8.83:0,9,79	0/0:25,0:24:8.18:0,8,61	0/0:27,0:26:16.56:0,17,136	0/0:26,0:25:11.98:0,12,104	0/1:17,0:17:0.61:17,0,1	1/1:9,0:9:1.99:23,2,0	0/1:9,0:11:11.47:14,0,11	0/0:10,0:28:8.91:0,9,64	1/1:34,0:34:2.77:22,3,0	./.	1/1:6,18:25:24.06:566,24,0	1/1:11,14:26:13.61:351,14,0	0/0:38,0:38:36:0,36,319	0/0:11,0:37:38.70:0,39,324	0/0:3,0:15:11.98:0,12,100	0/0:9,0:10:2.93:0,3,28
chr10	41047338	.	TTG	T	3140.46	PASS	AB=0.915;AC=36;AF=0.643;AN=56;BaseQRankSum=5.962;DP=720;FS=10.576;HRun=0;HaplotypeScore=120.4922;InbreedingCoeff=0.1836;MQ=58.02;MQ0=13;MQRankSum=0.839;QD=5.36;ReadPosRankSum=2.369;VQSLOD=2.4476;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:34,10:46:52.38:52,0,813	0/1:15,0:18:6.96:7,0,109	0/1:37,0:18:4.71:5,0,59	0/0:39,0:17:3.48:0,3,47	0/0:22,0:21:9.01:0,9,106	1/1:14,0:30:31:143,31,0	1/1:10,0:18:18.56:87,19,0	0/1:29,9:38:56.80:249,0,57	0/1:27,5:32:18.88:19,0,561	1/1:15,10:25:29.38:333,29,0	1/1:5,7:12:12.03:134,12,0	0/1:16,0:16:18.53:19,0,140	0/1:11,2:13:9.43:9,0,291	0/0:11,0:26:8.67:0,9,79	1/1:16,7:23:21.06:235,21,0	0/0:18,0:23:8.98:0,9,88	0/0:13,0:23:8.52:0,9,75	1/1:8,10:19:23.90:249,24,0	1/1:20,4:25:14.63:148,15,0	1/1:15,4:20:23.88:239,24,0	1/1:33,17:52:41.45:391,41,0	0/1:33,3:36:57.51:58,0,614	0/1:15,0:15:46.46:46,0,53	0/1:25,1:27:12.65:13,0,581	1/1:8,7:16:14.91:149,15,0	1/1:10,12:23:38.93:408,39,0	1/1:11,13:25:26.90:282,27,0	1/1:13,2:16:5.85:47,6,0
chr10	41047794	.	CT	C	2213.24	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=3.884;DP=884;FS=9.924;HRun=2;HaplotypeScore=111.6470;InbreedingCoeff=0.9993;MQ=68.27;MQ0=0;MQRankSum=-0.407;QD=33.53;ReadPosRankSum=-0.453;VQSLOD=2.2166;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:63,0:63:99:0,184,2701	0/0:11,0:11:33.11:0,33,495	0/0:20,0:18:50.18:0,50,675	0/0:17,0:18:46.29:0,46,546	0/0:26,0:26:75.25:0,75,1114	1/1:0,22:22:60.19:778,60,0	1/1:1,43:42:99:1556,120,0	0/0:30,0:30:90.29:0,90,1309	0/0:43,0:43:99:0,114,1675	0/0:34,0:34:96.31:0,96,1414	0/0:20,0:20:60.20:0,60,885	0/0:34,0:34:99:0,102,1502	0/0:34,0:34:96.27:0,96,1383	0/0:32,0:32:96.28:0,96,1398	0/0:53,0:53:99:0,138,2057	0/0:42,0:42:99:0,126,1849	0/0:36,0:36:99:0,105,1553	0/0:26,0:26:72.24:0,72,1079	0/0:22,0:22:60.19:0,60,853	0/0:26,0:26:78.26:0,78,1164	0/0:54,0:54:99:0,151,2217	0/0:25,0:25:72.17:0,72,1025	0/0:33,0:33:96.33:0,96,1438	0/0:48,0:48:99:0,144,2127	0/0:18,0:18:54.17:0,54,785	0/0:35,0:35:99:0,102,1474	0/0:26,0:26:75.21:0,75,1089	0/0:9,0:9:27.09:0,27,405
chr10	41048309	.	GCTTTTT	G	182.94	PASS	AB=0.965;AC=9;AF=0.161;AN=56;BaseQRankSum=7.665;DP=469;FS=27.410;HRun=0;HaplotypeScore=95.6904;InbreedingCoeff=-0.1394;MQ=65.82;MQ0=3;MQRankSum=-5.312;QD=1.33;ReadPosRankSum=5.330;VQSLOD=-0.2351;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:46.79:0,47,845	0/1:9,0:9:29.03:29,0,103	0/0:33,0:11:30.73:0,31,287	0/1:18,0:7:21.59:22,0,81	0/0:21,0:21:50.99:0,51,448	0/1:7,4:11:34.06:34,0,136	0/1:20,0:20:4.94:5,0,288	0/0:24,0:24:68.49:0,68,566	0/0:10,0:10:17.53:0,18,331	0/0:18,0:16:44.42:0,44,991	0/0:22,0:21:49.09:0,49,959	0/0:12,0:12:32.33:0,32,537	0/0:13,0:13:34.89:0,35,676	0/0:16,0:16:46.63:0,47,569	0/0:14,0:14:29.04:0,29,434	0/0:13,0:13:35.71:0,36,489	0/0:12,0:12:35.44:0,35,572	0/0:33,0:33:89.82:0,90,1558	0/1:15,0:15:3.44:3,0,183	0/1:15,0:15:16.74:17,0,179	0/0:8,0:8:8.62:0,9,68	0/0:25,0:24:65.60:0,66,1114	0/0:17,0:17:48.63:0,49,718	0/0:12,0:12:32.97:0,33,566	0/0:11,0:11:33.10:0,33,893	0/1:19,0:19:26.63:27,0,311	0/1:25,0:25:99:127,0,163	0/1:5,0:5:7.01:53,0,7
chr10	41049251	.	TCAAGC	T	4600.93	PASS	AB=1.000;AC=18;AF=0.321;AN=56;BaseQRankSum=1.472;DP=654;FS=5.517;HRun=0;HaplotypeScore=129.9713;InbreedingCoeff=0.4757;MQ=78.09;MQ0=4;MQRankSum=-4.857;QD=15.49;ReadPosRankSum=2.816;VQSLOD=3.8852;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:78.13:0,78,1771	0/0:7,0:7:21.04:0,21,407	0/0:25,0:19:25.22:0,25,435	0/0:31,0:28:36.88:0,37,403	1/1:2,10:12:11.97:165,12,0	1/1:5,17:22:33.11:643,33,0	1/1:5,18:23:30.10:569,30,0	0/0:25,0:25:54.12:0,54,990	0/0:28,0:28:25.24:0,25,1246	0/1:27,0:27:99:173,0,536	0/0:10,0:10:4.29:0,4,298	0/0:35,0:35:90.25:0,90,2083	0/1:36,0:36:67.39:67,0,1115	1/1:3,22:25:36.12:669,36,0	0/1:26,0:26:33.85:34,0,1038	1/1:2,26:28:48.16:935,48,0	1/1:2,33:35:60.21:1169,60,0	0/1:17,0:17:54.41:54,0,520	0/0:8,0:8:21.04:0,21,376	0/0:14,0:14:42.11:0,42,1091	0/0:37,0:37:81.18:0,81,1788	0/1:22,0:22:69.01:69,0,710	0/0:17,0:17:27:0,27,446	0/0:34,0:34:99:0,99,2596	0/1:24,0:23:54:54,0,622	0/0:21,0:21:57.12:0,57,1221	0/0:29,0:29:81.16:0,81,1909	0/0:4,0:3:9.03:0,9,266
chr10	41050438	.	TGTGTGTGC	T	1476.17	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=3.255;DP=541;FS=5.084;HRun=0;HaplotypeScore=141.0033;InbreedingCoeff=-0.0715;MQ=73.11;MQ0=6;MQRankSum=-3.774;QD=4.56;ReadPosRankSum=-0.004;VQSLOD=1.9793;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:41.15:0,41,605	0/0:11,0:11:4.51:0,5,98	0/0:30,0:18:40.54:0,41,342	0/0:35,0:22:28.16:0,28,338	0/1:13,0:13:0:0,0,0	1/1:14,2:16:35.92:471,36,0	1/1:2,16:18:9.03:244,9,0	0/0:18,0:18:45.21:0,45,389	0/1:25,0:25:99:104,0,747	0/1:16,0:16:66.90:67,0,530	0/1:14,0:14:15.93:16,0,110	0/0:24,0:24:43.01:0,43,1345	0/1:17,0:17:99:112,0,611	1/1:20,0:20:20.95:168,21,0	0/1:20,0:20:99:114,0,768	1/1:13,0:13:5.99:48,6,0	0/1:35,0:35:12.23:12,0,31	0/1:20,0:20:49.25:49,0,962	0/1:21,0:21:13.54:14,0,330	0/1:17,0:17:4.41:4,0,78	0/0:33,0:32:72.43:0,72,595	0/1:11,0:11:22.03:22,0,432	0/0:16,0:16:37.27:0,37,1089	0/0:28,0:28:71.96:0,72,1989	0/1:14,0:14:45.78:46,0,516	0/1:12,0:12:29.30:29,0,68	0/1:12,0:12:57.26:120,0,57	0/1:10,0:9:9.02:9,0,32
chr10	41050440	.	TGTGTGC	T	2526.53	PASS	AB=0.968;AC=25;AF=0.446;AN=56;BaseQRankSum=2.653;DP=549;FS=0.920;HRun=0;HaplotypeScore=122.5564;InbreedingCoeff=-0.0658;MQ=70.52;MQ0=6;MQRankSum=-5.858;QD=7.37;ReadPosRankSum=1.655;VQSLOD=2.3766;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:41.15:0,41,510	0/1:10,0:10:30.85:31,0,40	0/0:30,0:18:40.54:0,41,342	0/0:32,0:19:27.90:0,28,302	0/1:1,13:14:0:0,0,0	1/1:14,0:14:35.92:378,36,0	1/1:17,0:17:9.03:146,9,0	0/0:18,0:18:36.24:0,36,277	0/1:26,0:26:99:171,0,503	0/1:19,0:19:97.04:97,0,418	0/1:15,0:15:16.12:16,0,76	0/0:24,0:24:42.37:0,42,1064	0/1:19,0:19:99:124,0,391	1/1:1,18:19:21.07:480,21,0	0/1:20,0:20:99:140,0,462	1/1:2,11:13:6.02:137,6,0	1/1:35,1:36:11.24:105,11,0	0/1:20,0:20:49.17:49,0,689	0/1:21,0:21:58.28:58,0,293	0/1:16,0:16:39.93:125,0,40	0/0:34,0:33:35.75:0,36,499	0/1:12,0:12:47.41:47,0,274	0/0:16,0:16:40.26:0,40,890	0/0:29,0:29:74.63:0,75,1617	0/1:16,0:16:42.79:43,0,391	0/1:12,0:12:62.92:214,0,63	0/1:13,0:13:53.66:142,0,54	0/1:11,0:10:26.91:202,0,27
chr10	41050442	.	TGTGC	T	2164.96	PASS	AB=0.992;AC=24;AF=0.444;AN=54;BaseQRankSum=3.342;DP=553;FS=3.849;HRun=0;HaplotypeScore=109.3034;InbreedingCoeff=0.0491;MQ=70.45;MQ0=6;MQRankSum=-3.414;QD=7.05;ReadPosRankSum=-0.488;VQSLOD=2.1437;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:41.14:0,41,403	1/1:9,0:9:4.20:23,4,0	0/0:30,0:18:40.54:0,41,342	0/0:32,0:19:28.13:0,28,307	./.	1/1:13,0:13:35.91:322,36,0	1/1:17,0:17:9.03:104,9,0	0/0:18,0:18:44.63:0,45,304	0/1:25,0:25:99:234,0,231	0/1:19,1:20:99:224,0,145	0/1:14,0:14:11.47:19,0,11	0/0:25,0:25:20.37:0,20,747	0/1:18,1:19:99:180,0,126	1/1:18,0:18:21.06:251,21,0	0/1:21,0:21:99:214,0,183	1/1:12,0:12:6.02:72,6,0	1/1:3,32:35:12.04:206,12,0	0/1:19,0:19:52.24:52,0,391	0/0:20,0:20:20.05:0,20,314	0/1:16,0:16:27.07:27,0,40	0/0:36,0:35:51.93:0,52,507	0/1:14,0:14:99:141,0,110	0/0:18,0:18:16.75:0,17,643	0/0:30,0:30:75.13:0,75,1219	0/1:18,0:18:88.03:88,0,159	0/1:13,0:13:60.41:98,0,60	0/1:13,0:13:50.53:51,0,53	0/1:11,0:10:28.17:41,0,28
chr10	41050444	.	TGC	T	2590.65	PASS	AB=0.988;AC=26;AF=0.481;AN=54;BaseQRankSum=1.926;DP=553;FS=14.603;HRun=0;HaplotypeScore=92.8633;InbreedingCoeff=0.3130;MQ=67.82;MQ0=6;MQRankSum=-2.148;QD=8.72;ReadPosRankSum=-3.809;VQSLOD=1.5180;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:40.94:0,41,328	1/1:1,9:10:8.97:110,9,0	0/0:30,0:18:40.54:0,41,342	0/0:30,0:16:28.17:0,28,308	./.	1/1:14,0:14:38.75:289,39,0	1/1:16,0:16:8.93:62,9,0	0/0:18,0:18:20.31:0,20,277	0/1:24,0:24:53.39:301,0,53	1/1:19,1:20:6.16:362,6,0	1/1:14,0:14:9.89:97,10,0	0/0:25,0:25:2.34:0,2,473	1/1:18,1:19:11.74:331,12,0	1/1:18,0:18:20.88:154,21,0	0/1:20,1:21:17.35:332,0,17	1/1:11,0:11:5.97:44,6,0	1/1:34,0:34:11.96:95,12,0	0/1:17,1:18:99:100,0,131	0/0:21,0:21:49.38:0,49,356	0/0:15,0:15:6.69:0,7,55	0/0:37,0:36:32.42:0,32,466	0/1:15,0:15:17.55:207,0,18	0/1:18,0:18:25.82:26,0,403	0/0:30,0:30:55.81:0,56,875	0/1:18,0:18:4.35:191,0,4	0/1:13,0:13:51.06:51,0,68	0/1:14,0:14:26.05:26,0,59	0/0:11,0:10:6.82:0,7,49
chr10	41050446	.	CGTGTGT	C	1993.69	PASS	AB=0.986;AC=21;AF=0.404;AN=52;BaseQRankSum=2.129;DP=559;FS=1.448;HRun=0;HaplotypeScore=128.2818;InbreedingCoeff=0.3295;MQ=63.94;MQ0=6;MQRankSum=-6.287;QD=7.12;ReadPosRankSum=0.209;VQSLOD=2.5478;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:16,0:28:6:6,0,288	0/1:11,0:11:11.91:12,0,88	./.	./.	0/1:14,0:14:0:0,0,0	1/1:14,0:14:13.28:154,13,0	0/1:17,0:17:12.92:98,0,13	0/1:19,0:19:11.62:43,0,12	0/0:22,0:22:33.11:0,33,832	0/0:19,0:19:39.01:0,39,793	0/0:14,0:14:5.85:0,6,130	0/0:25,0:27:34.50:0,35,890	0/0:19,0:19:31.46:0,31,695	1/1:20,0:20:20.84:353,21,0	0/0:21,0:21:37.05:0,37,828	0/1:12,0:12:15.93:92,0,16	0/1:34,0:34:36.30:36,0,43	0/0:17,0:17:33.11:0,33,994	0/1:17,2:20:15.96:152,0,16	1/1:7,8:15:9.03:185,9,0	0/1:39,0:38:58.77:168,0,59	0/0:15,0:15:22.88:0,23,491	0/0:18,0:18:37.35:0,37,871	0/0:29,0:29:51.11:0,51,1413	0/0:20,0:20:27.56:0,28,653	1/1:5,7:12:16.99:323,17,0	1/1:6,2:14:14.46:243,14,0	1/1:4,7:10:15.05:308,15,0
chr10	41050778	.	T	TGGCAATG	60378.96	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=2.493;DP=841;FS=6.638;HRun=0;HaplotypeScore=223.4748;InbreedingCoeff=0.9936;MQ=72.90;MQ0=0;MQRankSum=-19.446;QD=96.45;ReadPosRankSum=-1.554;VQSLOD=4.1005;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,157,4139	1/1:4,11:16:39.11:1489,39,0	0/0:33,0:32:84.25:0,84,1954	0/0:30,0:30:78.27:0,78,1899	1/1:6,20:27:66.08:1980,66,0	1/1:13,18:35:90.31:3177,90,0	1/1:13,20:34:84.29:3110,84,0	1/1:23,16:42:99:4354,120,0	1/1:9,32:42:99:4649,120,0	1/1:13,14:27:78.26:2723,78,0	1/1:8,12:21:60.17:1686,60,0	0/0:37,0:37:99:0,108,2825	1/1:15,21:36:99:3591,105,0	1/1:2,14:18:42.14:1578,42,0	1/1:16,28:43:99:4646,129,0	1/1:7,24:31:93.32:3575,93,0	1/1:3,14:18:45.15:1717,45,0	1/1:7,6:13:39.10:1200,39,0	1/1:11,12:30:74.67:2538,75,0	1/1:4,21:26:69.24:2351,69,0	1/1:11,5:20:30.10:829,30,0	1/1:6,22:28:81.28:2908,81,0	0/0:23,0:23:69.22:0,69,1774	0/0:37,0:37:99:0,108,2890	1/1:10,23:33:96.33:3511,96,0	1/1:18,28:50:99:5430,147,0	1/1:5,21:29:78.27:2929,78,0	1/1:2,3:5:12.04:411,12,0
chr10	41050827	.	AG	A	8143.91	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=11.406;DP=783;FS=5.347;HRun=1;HaplotypeScore=192.8669;InbreedingCoeff=0.9995;MQ=75.33;MQ0=0;MQRankSum=-6.674;QD=36.68;ReadPosRankSum=1.921;VQSLOD=4.1898;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,147,2273	0/0:14,0:14:41.08:0,41,596	0/0:36,0:35:97.77:0,98,1450	0/0:22,0:22:56.98:0,57,815	0/0:14,0:14:38.81:0,39,299	0/0:31,0:31:86.78:0,87,743	0/0:30,0:30:80.71:0,81,653	0/0:33,0:33:99:0,99,1548	1/1:2,36:38:99:1373,105,0	1/1:0,29:29:81.27:1130,81,0	1/1:0,12:12:35.67:381,36,0	0/0:47,0:47:99:0,141,2164	1/1:0,33:33:96.12:1267,96,0	0/0:22,0:22:62.91:0,63,536	1/1:2,42:44:99:1623,123,0	0/0:24,0:24:71.93:0,72,634	0/0:15,0:15:35.93:0,36,313	1/1:0,17:17:51.17:712,51,0	0/0:30,0:30:90.26:0,90,1408	0/0:26,0:26:75.18:0,75,1107	0/0:26,0:26:66.07:0,66,958	1/1:0,25:25:74.70:900,75,0	0/0:20,0:20:60.01:0,60,891	0/0:44,0:44:99:0,129,2060	1/1:1,23:24:62.86:759,63,0	0/0:36,2:38:30.54:0,31,1562	0/0:32,0:32:87.11:0,87,1289	0/0:8,0:8:24.08:0,24,382
chr10	41052098	.	ATGGGGG	A	247.42	PASS	AB=0.920;AC=5;AF=0.089;AN=56;BaseQRankSum=5.197;DP=674;FS=1.316;HRun=0;HaplotypeScore=180.5335;InbreedingCoeff=0.2625;MQ=91.42;MQ0=0;MQRankSum=-3.990;QD=3.17;ReadPosRankSum=-2.020;VQSLOD=2.5537;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,99,3439	0/0:10,0:10:30.10:0,30,1088	0/0:32,0:32:90.31:0,90,3017	0/0:24,0:25:49.12:0,49,2238	0/1:19,1:20:15.17:36,0,15	0/0:36,0:36:99:0,108,3755	0/0:27,0:27:81.26:0,81,2773	0/0:31,0:31:93.32:0,93,3299	0/0:20,0:20:60.19:0,60,2109	0/0:28,0:28:81.27:0,81,2851	0/0:23,0:23:66.18:0,66,2308	0/0:22,0:22:66.23:0,66,2373	0/0:25,0:25:75.26:0,75,2723	0/1:18,3:21:11.91:157,0,12	0/0:24,0:24:72.25:0,72,2628	0/1:26,2:28:22.44:138,0,22	1/1:9,0:9:3.32:28,3,0	0/0:15,0:15:45.14:0,45,1532	0/0:26,0:26:78.26:0,78,2728	0/0:27,0:27:78.27:0,78,2808	0/0:26,0:26:78.23:0,78,2611	0/0:26,0:26:78.27:0,78,2840	0/0:27,0:27:81.28:0,81,2856	0/0:19,0:19:57.20:0,57,2057	0/0:22,0:22:66.22:0,66,2322	0/0:30,0:30:87.30:0,87,3136	0/0:24,0:24:72.25:0,72,2613	0/0:16,0:16:42.14:0,42,1504
chr10	41052099	.	TGGG	T	1870.96	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=11.584;DP=675;FS=1.852;HRun=5;HaplotypeScore=133.2492;InbreedingCoeff=0.9849;MQ=91.42;MQ0=0;MQRankSum=-10.762;QD=23.99;ReadPosRankSum=3.394;VQSLOD=0.2001;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:96.29:0,96,2142	0/0:10,0:10:30.10:0,30,691	0/0:33,0:32:90.31:0,90,1932	0/0:25,0:25:35.44:0,35,1406	1/1:9,11:20:34.93:518,35,0	0/0:37,0:37:99:0,108,2431	0/0:27,0:27:75.26:0,75,1712	0/0:32,0:32:93.31:0,93,2092	0/0:20,0:20:57.20:0,57,1315	0/0:28,0:28:78.27:0,78,1778	0/0:24,0:24:66.23:0,66,1503	0/0:22,0:22:66.21:0,66,1477	0/0:25,0:25:75.26:0,75,1726	1/1:10,10:21:40.78:534,41,0	0/0:24,0:24:72.25:0,72,1661	1/1:10,18:27:56.69:842,57,0	1/1:6,3:9:9.50:134,10,0	0/0:16,0:16:45.15:0,45,1027	0/0:26,0:26:75.26:0,75,1703	0/0:27,0:27:78.27:0,78,1768	0/0:27,0:27:75.26:0,75,1674	0/0:26,0:26:78.27:0,78,1799	0/0:27,0:27:78.25:0,78,1746	0/0:19,0:19:57.20:0,57,1305	0/0:22,0:22:63.22:0,63,1449	0/0:29,0:29:87.30:0,87,1978	0/0:24,0:24:72.25:0,72,1641	0/0:14,0:14:42.14:0,42,959
chr10	41052109	.	GTCC	G	1231.56	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=11.851;DP=655;FS=0.000;HRun=0;HaplotypeScore=134.3871;InbreedingCoeff=0.9831;MQ=92.36;MQ0=0;MQRankSum=-10.961;QD=22.81;ReadPosRankSum=3.001;VQSLOD=3.6509;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,99,2249	0/0:10,0:10:30.10:0,30,691	0/0:32,0:33:83.92:0,84,1689	0/0:23,0:23:57.01:0,57,1123	1/1:14,1:15:38.97:338,39,0	0/0:36,0:36:99:0,108,2446	0/0:27,0:27:78.27:0,78,1781	0/0:28,0:28:72.24:0,72,1556	0/0:21,0:21:63.22:0,63,1434	0/0:25,0:25:75.25:0,75,1658	0/0:26,0:26:69.24:0,69,1584	0/0:25,0:25:69.23:0,69,1502	0/0:26,0:26:75.26:0,75,1724	1/1:12,3:15:45.01:439,45,0	0/0:25,0:25:75.26:0,75,1678	1/1:18,2:20:59.98:546,60,0	1/1:4,0:4:8.93:64,9,0	0/0:20,0:20:60.16:0,60,1328	0/0:30,0:30:90.31:0,90,1997	0/0:29,0:29:81.28:0,81,1867	0/0:23,0:23:66.23:0,66,1494	0/0:26,0:26:78.27:0,78,1767	0/0:26,0:26:78.27:0,78,1775	0/0:21,0:21:63.19:0,63,1363	0/0:20,0:20:60.21:0,60,1378	0/0:28,0:28:84.29:0,84,1937	0/0:27,0:27:78.27:0,78,1771	0/0:12,0:12:36.12:0,36,830
chr10	41052111	.	C	CATTAA	4592.11	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=11.683;DP=662;FS=0.530;HRun=0;HaplotypeScore=159.5563;InbreedingCoeff=0.9834;MQ=91.11;MQ0=0;MQRankSum=-11.073;QD=85.04;ReadPosRankSum=2.953;VQSLOD=6.6440;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,99,2271	0/0:10,0:10:30.10:0,30,699	0/0:32,0:32:86.73:0,87,1742	0/0:22,0:22:49.62:0,50,1076	1/1:4,11:15:39.13:1142,39,0	0/0:37,0:37:99:0,108,2471	0/0:26,0:26:78.27:0,78,1796	0/0:30,0:30:78.19:0,78,1572	0/0:21,0:21:63.22:0,63,1447	0/0:26,0:26:75.25:0,75,1658	0/0:28,0:28:69.24:0,69,1585	0/0:25,0:25:72.21:0,72,1522	0/0:27,0:27:78.25:0,78,1754	1/1:5,10:15:45.15:1350,45,0	0/0:25,0:25:75.25:0,75,1663	1/1:2,18:19:60.21:1825,60,0	1/1:1,3:4:9.03:275,9,0	0/0:20,0:20:60.16:0,60,1339	0/0:31,0:31:90.31:0,90,2029	0/0:27,0:27:81.28:0,81,1886	0/0:23,0:23:66.21:0,66,1493	0/0:26,0:26:78.25:0,78,1772	0/0:26,0:26:78.26:0,78,1775	0/0:21,0:21:63.19:0,63,1375	0/0:21,0:21:63.21:0,63,1403	0/0:29,0:29:87.28:0,87,1980	0/0:29,0:29:81.27:0,81,1800	0/0:12,0:12:36.12:0,36,838
chr10	41053204	.	TAC	T	1016.18	PASS	AB=0.817;AC=27;AF=0.587;AN=46;BaseQRankSum=1.598;DP=451;FS=5.226;HRun=0;HaplotypeScore=94.3787;InbreedingCoeff=0.2087;MQ=62.70;MQ0=7;MQRankSum=1.623;QD=3.94;ReadPosRankSum=0.611;VQSLOD=2.0210;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:6.87:0,7,50	0/0:5,0:5:0:0,0,0	./.	./.	./.	1/1:15,0:15:12.29:50,12,0	./.	1/1:18,0:16:2.84:14,3,0	./.	0/0:12,0:12:10.08:0,10,57	0/0:15,0:15:6:0,6,54	0/0:15,0:15:1.41:0,1,228	1/1:6,0:5:3:27,3,0	1/1:13,0:13:3:30,3,0	0/0:17,0:16:4.28:0,4,20	1/1:23,0:23:5.73:44,6,0	1/1:15,0:14:2.94:18,3,0	0/0:15,0:15:20.25:0,20,160	1/1:10,1:11:3.01:33,3,0	1/1:6,15:23:38.67:393,39,0	1/1:11,8:18:6.02:67,6,0	1/1:15,0:14:2.94:20,3,0	0/1:16,1:17:14.47:14,0,311	0/1:21,4:25:24.67:25,0,457	0/1:13,0:13:4.25:4,0,85	0/1:9,9:18:14.11:288,0,14	0/1:8,8:16:30.50:99,0,30	1/1:6,3:9:3.01:33,3,0
chr10	41053236	.	CACACATACACAG	C	345.43	PASS	AB=0.847;AC=12;AF=0.231;AN=52;BaseQRankSum=4.497;DP=460;FS=0.000;HRun=0;HaplotypeScore=143.9139;InbreedingCoeff=0.1997;MQ=46.89;MQ0=9;MQRankSum=-4.553;QD=2.62;ReadPosRankSum=-2.547;VQSLOD=1.9720;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:24.08:0,24,714	1/1:6,0:6:0.69:2,1,0	0/0:14,0:5:15.05:0,15,282	0/0:14,0:5:5.73:0,6,158	./.	0/1:13,0:14:11.27:11,0,73	./.	0/0:23,0:20:44.50:0,44,936	1/1:17,0:17:2.50:9,2,0	0/1:14,0:13:8:8,0,478	0/0:12,0:12:12.04:0,12,356	0/0:19,0:19:14.67:0,15,1687	0/0:8,0:7:3.01:0,3,30	0/1:5,14:19:3.80:97,0,4	0/0:25,0:22:14.94:0,15,265	0/1:5,14:18:99:196,0,143	1/1:4,11:14:8.95:120,9,0	0/1:14,0:14:5.02:5,0,753	0/0:8,0:7:21.07:0,21,831	0/0:27,0:27:50.36:0,50,1675	0/0:19,0:17:20.93:0,21,615	0/0:15,0:15:6.02:0,6,132	0/0:17,0:16:37.01:0,37,1816	0/0:29,0:29:75.23:0,75,2999	0/0:14,0:14:15.05:0,15,507	0/0:19,0:19:56.78:0,57,1848	0/1:14,0:13:28.83:29,0,573	0/0:4,0:4:6.01:0,6,156
chr10	41053238	.	CACAT	C	435.64	PASS	AB=0.996;AC=25;AF=0.481;AN=52;BaseQRankSum=4.422;DP=459;FS=5.493;HRun=0;HaplotypeScore=108.5787;InbreedingCoeff=0.0835;MQ=46.79;MQ0=7;MQRankSum=-2.047;QD=1.40;ReadPosRankSum=-3.305;VQSLOD=1.0576;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:20.87:0,21,230	0/1:6,0:6:0:0,0,0	0/0:14,0:5:15.01:0,15,141	0/0:16,0:5:5.01:0,5,64	./.	1/1:13,1:14:14.84:211,15,0	./.	0/1:21,0:18:3.77:4,0,295	0/1:16,1:17:0:0,0,0	0/1:15,0:14:45.61:75,0,46	0/1:13,0:13:14.94:15,0,45	0/1:19,0:19:3.82:4,0,631	1/1:8,0:7:2.99:24,3,0	1/1:17,0:17:5.17:39,5,0	0/1:25,0:22:11.93:17,0,12	1/1:18,0:18:4.16:63,4,0	1/1:14,0:13:8.83:54,9,0	0/1:14,0:14:17.04:17,0,94	0/0:8,0:7:20.91:0,21,224	0/1:28,0:28:5.15:5,0,285	0/0:19,0:17:20.87:0,21,162	1/1:15,0:15:4.93:31,5,0	0/1:17,0:16:8.56:9,0,589	0/0:29,0:29:65.30:0,65,1057	0/1:15,0:15:4.61:5,0,73	0/1:21,0:21:12.76:13,0,371	0/1:13,0:13:2.17:2,0,156	0/0:4,0:4:4.24:0,4,28
chr10	41053240	.	CAT	C	883.29	PASS	AB=0.937;AC=30;AF=0.577;AN=52;BaseQRankSum=8.041;DP=452;FS=14.504;HRun=0;HaplotypeScore=97.6018;InbreedingCoeff=0.1823;MQ=46.77;MQ0=6;MQRankSum=-2.224;QD=2.80;ReadPosRankSum=-0.601;VQSLOD=0.9302;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:25:1.44:1,0,146	0/1:6,0:6:0:0,0,0	0/0:14,0:6:18:0,18,165	0/0:16,0:5:5.01:0,5,64	./.	1/1:12,1:14:14.84:143,15,0	./.	0/0:21,0:18:15.15:0,15,285	0/1:2,15:17:0:0,0,0	1/1:15,0:14:21.29:147,21,0	1/1:13,0:13:2.01:42,2,0	0/1:19,0:19:8.92:9,0,377	1/1:1,7:7:3.01:44,3,0	1/1:17,0:17:5.18:39,5,0	1/1:23,0:20:7.78:50,8,0	1/1:19,0:18:11.63:90,12,0	1/1:14,0:13:8.83:54,9,0	0/1:12,0:12:22.10:34,0,22	0/0:10,0:9:16.36:0,16,144	0/1:28,0:28:53.84:93,0,54	0/1:18,0:16:8.33:8,0,94	1/1:11,4:15:5.53:67,6,0	0/0:17,0:16:3.10:0,3,415	0/0:26,0:26:31.16:0,31,690	0/1:13,2:15:16.16:50,0,16	0/1:19,1:20:99:127,0,144	0/1:13,0:13:34.31:34,0,75	1/1:4,0:4:0.49:7,0,0
chr10	41053692	.	A	AT	570.46	PASS	AB=0.930;AC=9;AF=0.161;AN=56;BaseQRankSum=-0.795;DP=488;FS=3.189;HRun=11;HaplotypeScore=84.5465;InbreedingCoeff=0.5078;MQ=76.64;MQ0=0;MQRankSum=-3.236;QD=6.00;ReadPosRankSum=-0.004;VQSLOD=2.1481;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:41.70:0,42,325	1/1:5,0:11:5.52:25,6,0	0/1:16,1:17:4.64:5,0,119	0/0:14,1:15:1.17:0,1,173	0/1:7,1:9:2.71:3,0,82	1/1:6,12:19:32.86:308,33,0	1/1:5,17:22:18.82:364,19,0	0/0:20,0:20:32.78:0,33,252	0/0:26,0:26:65.68:0,66,507	0/0:22,0:22:47.75:0,48,372	0/0:14,0:14:20.83:0,21,162	0/0:13,1:14:29.84:0,30,232	0/0:14,1:16:4.49:0,4,208	0/0:14,0:15:34.89:0,35,261	0/0:21,0:20:44.79:0,45,346	0/0:12,0:12:32.87:0,33,255	0/0:16,0:17:31.86:0,32,238	0/0:15,1:16:11.39:0,11,271	0/0:17,1:19:1.44:0,1,184	0/0:17,1:18:2.38:0,2,202	0/1:16,1:17:0.59:1,0,179	0/0:19,0:19:38.78:0,39,301	0/0:19,0:19:10.22:0,10,230	0/0:26,0:26:65.74:0,66,511	0/0:10,0:10:14.88:0,15,112	0/0:19,0:19:38.78:0,39,302	0/0:19,0:20:37.82:0,38,279	0/0:10,0:10:26.88:0,27,209
chr10	41053720	.	GCACA	G	2751.79	PASS	AB=0.613;AC=13;AF=0.232;AN=56;BaseQRankSum=-4.603;DP=486;FS=3.983;HRun=0;HaplotypeScore=125.4283;InbreedingCoeff=0.8746;MQ=61.92;MQ0=10;MQRankSum=-1.639;QD=24.57;ReadPosRankSum=-0.851;VQSLOD=3.2399;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:39.13:0,39,958	0/0:8,0:7:9.60:0,10,290	0/0:33,0:16:11.43:0,11,283	0/0:36,0:22:36.51:0,37,594	0/0:13,0:13:33.09:0,33,610	0/0:18,0:18:15.92:0,16,227	0/0:23,0:23:21.07:0,21,351	1/1:10,17:28:58.73:871,59,0	0/0:20,0:20:33.07:0,33,477	0/0:21,0:21:35.55:0,36,453	0/0:8,0:8:17.55:0,18,243	0/0:8,0:8:15.05:0,15,369	0/0:17,0:17:42.14:0,42,674	0/0:14,0:14:30.03:0,30,579	0/0:21,0:20:42.44:0,42,641	0/0:14,0:14:33.11:0,33,681	0/0:18,0:17:21.05:0,21,397	0/0:15,0:15:26.58:0,27,361	1/1:7,7:14:14.73:294,15,0	1/1:2,11:13:24:339,24,0	1/1:8,9:17:18.06:298,18,0	0/0:18,0:18:42.14:0,42,651	0/0:15,0:16:41.88:0,42,971	0/0:20,0:27:52.86:0,53,979	0/0:7,0:7:15.05:0,15,236	0/1:7,12:19:9.90:492,0,10	1/1:3,9:12:18.06:296,18,0	1/1:2,7:9:21.07:348,21,0
chr10	41053743	.	CA	C	1615.58	PASS	AB=0.976;AC=25;AF=0.446;AN=56;BaseQRankSum=7.416;DP=546;FS=8.504;HRun=2;HaplotypeScore=126.6621;InbreedingCoeff=0.6470;MQ=59.41;MQ0=19;MQRankSum=1.285;QD=6.44;ReadPosRankSum=5.553;VQSLOD=0.4535;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:63.17:0,63,878	0/0:11,0:10:21.22:0,21,167	0/0:48,0:23:62.79:0,63,747	0/0:43,0:26:68.65:0,69,868	0/1:13,0:14:11.17:27,0,11	1/1:13,4:17:13.96:76,14,0	1/1:27,2:29:14.63:108,15,0	0/0:34,1:35:51.26:0,51,667	1/1:14,2:15:27.81:225,28,0	1/1:16,2:18:27.70:253,28,0	1/1:7,1:8:14.23:118,14,0	0/0:8,0:8:24.08:0,24,343	1/1:19,0:17:31.90:202,32,0	1/1:13,0:12:0.07:13,0,0	1/1:22,0:22:38.15:266,38,0	1/1:13,0:13:14.11:43,14,0	0/1:21,0:17:1.80:8,0,2	0/1:17,1:18:13.54:149,0,14	0/0:16,1:17:37.13:0,37,435	0/0:11,0:11:12:0,12,35	0/0:35,0:35:66.29:0,66,721	1/1:18,0:18:38.70:273,39,0	0/0:17,0:17:50.38:0,50,699	0/0:30,0:30:74.13:0,74,924	0/1:8,0:7:13.25:56,0,13	0/1:16,0:16:3.06:3,0,137	0/0:11,0:11:10.95:0,11,97	0/0:7,0:7:14.26:0,14,43
chr10	41053744	.	A	AC	3545.56	PASS	AB=0.877;AC=25;AF=0.446;AN=56;BaseQRankSum=4.050;DP=541;FS=2.937;HRun=1;HaplotypeScore=121.6962;InbreedingCoeff=0.6580;MQ=59.40;MQ0=19;MQRankSum=1.032;QD=14.24;ReadPosRankSum=5.889;VQSLOD=3.4107;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:63.16:0,63,844	0/0:11,0:10:23.46:0,23,154	0/0:46,0:22:62.79:0,63,753	0/0:43,0:26:66.64:0,67,848	0/1:13,0:14:1.18:43,0,1	1/1:11,4:17:13.89:172,14,0	1/1:22,6:29:19.14:264,19,0	0/0:34,0:34:64.11:0,64,879	1/1:8,7:15:34.90:409,35,0	1/1:12,6:18:27.87:392,28,0	1/1:3,3:7:14.35:189,14,0	0/0:8,0:8:24.08:0,24,329	1/1:6,13:17:40.54:484,41,0	0/1:12,0:12:3.25:24,0,3	1/1:10,11:23:39.93:521,40,0	1/1:12,0:13:9.35:59,9,0	1/1:19,0:17:2.84:20,3,0	0/1:10,6:17:14:287,0,14	0/0:17,0:17:39.93:0,40,492	0/0:11,0:11:17.43:0,17,110	0/0:33,2:35:71.90:0,72,809	1/1:5,11:17:40.91:538,41,0	0/0:17,0:17:51.13:0,51,675	0/0:29,0:29:78.06:0,78,961	0/1:4,3:6:13.43:125,0,13	0/1:16,1:17:19.05:19,0,242	0/0:11,0:11:15.60:0,16,177	0/0:7,0:7:20.77:0,21,141
chr10	41053746	.	C	CA	3477.56	PASS	AB=0.893;AC=27;AF=0.482;AN=56;BaseQRankSum=5.784;DP=543;FS=1.788;HRun=2;HaplotypeScore=124.1376;InbreedingCoeff=0.7991;MQ=59.33;MQ0=20;MQRankSum=1.849;QD=14.02;ReadPosRankSum=5.212;VQSLOD=3.3512;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:65.80:0,66,838	0/0:11,0:10:27.04:0,27,311	0/0:46,0:23:62.39:0,62,733	0/0:45,0:27:62.83:0,63,813	0/1:14,0:14:11.80:40,0,12	1/1:14,0:18:27.30:252,27,0	1/1:24,1:29:37.29:315,37,0	0/0:35,0:35:92.12:0,92,1165	1/1:9,7:15:18.25:289,18,0	1/1:12,6:18:14.13:278,14,0	1/1:4,3:7:7.15:140,7,0	0/0:8,0:8:24.08:0,24,311	1/1:5,13:16:41.92:453,42,0	1/1:13,0:12:12.13:55,12,0	1/1:13,11:22:46.30:503,46,0	1/1:13,0:13:22.31:101,22,0	1/1:22,0:18:22.78:111,23,0	0/1:11,6:17:17.84:238,0,18	0/0:17,0:17:45.62:0,46,584	0/0:12,0:12:21.05:0,21,251	0/0:34,0:34:84.05:0,84,1055	1/1:6,11:17:46.08:536,46,0	0/0:17,0:17:51.15:0,51,646	0/0:28,0:28:75.24:0,75,973	1/1:3,3:5:12.04:168,12,0	0/1:15,1:16:0.19:0,0,439	0/0:11,0:11:24.06:0,24,299	0/0:8,0:8:21.07:0,21,271
chr10	41053775	.	TCACACACACA	T	413.36	PASS	AB=0.972;AC=18;AF=0.409;AN=44;BaseQRankSum=4.643;DP=434;FS=22.624;HRun=0;HaplotypeScore=162.2314;InbreedingCoeff=0.3711;MQ=55.40;MQ0=17;MQRankSum=-1.543;QD=2.65;ReadPosRankSum=0.901;VQSLOD=1.4814;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:22:12.69:0,13,239	0/1:10,0:9:0:0,0,0	./.	./.	1/1:12,0:11:2.03:7,2,0	0/1:14,0:15:13.50:13,0,57	0/0:24,0:24:0.47:0,0,1	./.	1/1:11,0:11:3.01:30,3,0	./.	./.	0/0:7,0:9:6.02:0,6,87	0/1:18,0:16:0:1,0,0	1/1:10,0:9:2.90:70,3,0	0/1:18,1:17:99:231,0,109	1/1:10,0:10:2.37:8,2,0	1/1:22,0:16:3.01:70,3,0	1/1:16,0:16:7.75:56,8,0	0/0:13,0:13:12.04:0,12,212	0/0:8,0:8:6.02:0,6,102	0/0:36,0:34:51.64:0,52,1024	./.	0/0:7,0:7:3.01:0,3,68	0/0:24,0:26:24.06:0,24,357	1/1:5,3:7:3.01:57,3,0	0/0:14,0:14:18.87:0,19,291	0/0:5,0:3:3.01:0,3,51	0/0:3,0:3:3.01:0,3,38
chr10	41054419	.	A	AAAC	19226.64	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=0.354;DP=717;FS=1.999;HRun=0;HaplotypeScore=108.4773;InbreedingCoeff=0.9997;MQ=91.78;MQ0=0;MQRankSum=-6.292;QD=54.01;ReadPosRankSum=2.054;VQSLOD=6.8805;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,156,2442	0/0:13,0:13:39.12:0,39,603	0/0:31,0:31:87.28:0,87,1347	0/0:31,0:31:81.27:0,81,1260	1/1:0,27:28:69.24:1501,69,0	1/1:0,12:12:33.11:728,33,0	1/1:5,21:27:63.22:1389,63,0	0/0:24,0:24:69.24:0,69,1109	1/1:1,24:26:63.22:1376,63,0	1/1:6,19:26:66.21:1343,66,0	1/1:1,9:10:27.09:596,27,0	0/0:25,0:25:69.22:0,69,1086	1/1:2,30:32:87.30:1906,87,0	1/1:3,24:28:63.04:1389,63,0	1/1:3,24:27:66.23:1444,66,0	1/1:3,20:26:60.21:1313,60,0	1/1:6,45:53:99:2695,124,0	1/1:0,23:23:63.21:1334,63,0	0/0:19,0:19:54.18:0,54,868	0/0:23,0:23:63.21:0,63,1013	0/0:32,0:32:93.32:0,93,1485	1/1:6,18:24:63.21:1313,63,0	0/0:15,0:15:33.11:0,33,530	0/0:31,0:31:84.18:0,84,1269	1/1:1,13:14:42.14:901,42,0	0/0:24,0:24:54.18:0,54,868	0/0:26,0:26:75.24:0,75,1174	0/0:13,0:13:32.93:0,33,506
chr10	41054702	.	GTTTT	G	3435.09	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-6.409;DP=520;FS=2.031;HRun=14;HaplotypeScore=120.9632;InbreedingCoeff=0.9513;MQ=66.50;MQ0=3;MQRankSum=-2.653;QD=26.42;ReadPosRankSum=1.241;VQSLOD=2.6332;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:29:69.19:0,69,1371	0/0:2,0:10:24.08:0,24,297	0/0:24,0:14:9.06:0,9,322	0/0:8,0:5:6.49:0,6,107	0/0:6,0:21:48.37:0,48,332	0/0:6,0:23:39.13:0,39,731	0/0:4,0:18:42.13:0,42,758	1/1:6,18:23:47.76:631,48,0	0/0:15,0:19:42.14:0,42,910	0/0:12,0:16:42.14:0,42,881	0/0:14,0:15:39.13:0,39,783	0/0:15,0:16:42.13:0,42,798	0/0:18,0:18:42.14:0,42,826	0/0:5,0:16:22.02:0,22,183	0/0:12,0:13:33.11:0,33,686	0/0:5,0:20:48.40:0,48,323	0/0:3,0:23:56.94:0,57,336	0/0:21,0:24:63.18:0,63,1289	1/1:7,10:19:32.91:449,33,0	1/1:6,17:23:38.90:539,39,0	1/1:4,5:9:5.85:59,6,0	0/0:15,0:17:39.12:0,39,788	0/0:18,0:18:48.10:0,48,903	0/0:18,0:18:45.15:0,45,978	0/0:21,0:22:54.16:0,54,1085	1/1:2,21:23:63.12:849,63,0	1/1:4,15:19:38.91:551,39,0	1/1:2,11:13:26.95:356,27,0
chr10	41056590	.	AGTGTGTGTGTGT	A	2136.01	PASS	AB=0.814;AC=12;AF=0.231;AN=52;BaseQRankSum=6.379;DP=695;FS=1.630;HRun=0;HaplotypeScore=216.5405;InbreedingCoeff=0.4068;MQ=61.01;MQ0=15;MQRankSum=-6.109;QD=10.08;ReadPosRankSum=0.871;VQSLOD=2.4131;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:37:24.55:0,25,1061	0/0:9,0:10:21.07:0,21,737	./.	./.	0/1:12,8:21:0.13:0,0,0	0/1:8,0:10:14.87:118,0,15	0/1:19,0:24:25.63:26,0,228	0/0:17,0:16:6.02:0,6,82	0/0:24,0:26:33.11:0,33,1362	0/1:24,0:28:9.68:10,0,137	0/1:19,1:21:18.86:26,0,19	0/0:29,0:29:48.15:0,48,2001	0/0:23,0:25:39.13:0,39,1799	1/1:16,18:32:17.99:1024,18,0	0/0:14,0:32:47.22:0,47,985	1/1:10,12:21:21.07:644,21,0	1/1:15,14:29:13.99:426,14,0	0/1:15,0:22:19.55:20,0,440	0/0:23,0:24:16.61:0,17,362	0/0:14,0:25:33.58:0,34,1142	0/0:27,0:35:45.14:0,45,1217	0/0:23,0:22:21.07:0,21,763	0/0:16,0:17:21.07:0,21,640	0/0:57,0:60:99:0,123,5366	0/0:14,0:13:21.07:0,21,368	0/0:18,0:20:33.10:0,33,803	0/0:18,0:23:24.08:0,24,668	0/0:10,0:13:18.06:0,18,681
chr10	41058249	.	ATCTG	A	1911.22	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=4.982;DP=518;FS=13.657;HRun=0;HaplotypeScore=107.5234;InbreedingCoeff=0.3263;MQ=55.05;MQ0=15;MQRankSum=3.080;QD=7.74;ReadPosRankSum=0.104;VQSLOD=1.4517;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:50.90:0,51,844	0/0:6,0:6:15.05:0,15,356	0/1:44,0:10:6.68:7,0,253	0/0:61,0:21:22.39:0,22,407	0/1:12,0:12:33.63:34,0,34	1/1:6,2:7:11.97:119,12,0	1/1:3,16:19:2.75:51,3,0	0/0:19,0:14:36.09:0,36,757	0/1:8,0:8:50.51:60,0,51	1/1:13,0:13:15.11:228,15,0	1/1:14,0:13:29.97:316,30,0	0/0:21,0:21:48.15:0,48,1011	0/1:14,0:14:88.98:89,0,117	0/1:17,0:17:23.23:193,0,23	0/1:23,0:23:0.21:303,0,0	0/1:20,0:20:30.99:136,0,31	0/1:20,0:20:68.37:124,0,68	1/1:10,0:10:20.88:170,21,0	0/0:14,0:14:30.10:0,30,611	0/0:16,0:15:39.12:0,39,801	0/0:25,0:24:39.01:0,39,872	0/1:11,0:11:51.40:51,0,94	0/0:9,0:9:27.09:0,27,627	0/0:26,0:26:69.24:0,69,1601	1/1:14,0:14:20.65:219,21,0	0/0:20,0:18:42.14:0,42,1013	0/0:19,0:19:43.39:0,43,902	0/0:8,0:8:24.07:0,24,519
chr10	41058296	.	TCA	T	1165.65	PASS	AB=1.000;AC=33;AF=0.635;AN=52;BaseQRankSum=3.367;DP=450;FS=4.168;HRun=0;HaplotypeScore=110.7236;InbreedingCoeff=0.5511;MQ=51.19;MQ0=18;MQRankSum=-1.483;QD=4.15;ReadPosRankSum=-1.535;VQSLOD=1.8026;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:34:11.81:0,12,95	0/0:6,0:5:11.98:0,12,115	./.	./.	1/1:8,1:13:5.86:34,6,0	0/0:9,0:8:2.97:0,3,37	0/0:28,0:24:2.48:0,2,174	1/1:20,4:21:5.95:48,6,0	0/0:13,0:13:6.49:0,6,153	1/1:9,0:9:2.96:19,3,0	1/1:6,2:7:2.90:20,3,0	0/0:17,0:17:24.40:0,24,223	0/1:17,0:17:2.84:3,0,193	1/1:11,0:15:7.68:51,8,0	1/1:13,1:15:11.70:78,12,0	1/1:15,1:17:6.82:36,7,0	1/1:22,4:26:31.63:186,32,0	1/1:10,0:10:14.54:91,15,0	1/1:14,0:13:23.86:185,24,0	1/1:9,0:7:5.99:49,6,0	0/1:22,0:13:3.54:36,0,4	0/1:23,0:22:11.78:12,0,78	0/0:15,0:15:19.69:0,20,143	0/0:31,0:30:15.21:0,15,378	1/1:13,1:13:20.88:164,21,0	1/1:18,0:16:15.41:125,15,0	1/1:14,0:13:0.22:20,0,0	1/1:11,0:11:26.08:184,26,0
chr10	41060440	.	GA	G	5122.82	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=10.302;DP=624;FS=0.335;HRun=6;HaplotypeScore=63.8576;InbreedingCoeff=0.9983;MQ=82.94;MQ0=0;MQRankSum=-0.630;QD=29.44;ReadPosRankSum=-0.247;VQSLOD=5.2328;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:48.15:0,48,610	0/0:14,0:14:39.06:0,39,460	0/0:27,0:26:35.11:0,35,612	0/0:23,0:23:46.83:0,47,587	0/0:36,0:36:96.28:0,96,1215	0/0:26,0:25:72.18:0,72,890	0/0:7,0:7:18.05:0,18,222	1/1:1,28:29:84.17:878,84,0	0/0:15,0:15:39.11:0,39,493	0/0:25,0:25:72.22:0,72,921	0/0:20,0:20:60.18:0,60,762	0/0:18,0:18:51.17:0,51,663	0/0:25,0:25:69.20:0,69,867	0/0:14,0:14:42.12:0,42,531	0/0:19,0:19:54.18:0,54,701	0/0:24,0:24:66.20:0,66,843	0/0:34,0:34:93.26:0,93,1165	0/0:17,0:17:48.13:0,48,607	1/1:0,10:10:30.06:314,30,0	1/1:0,42:42:99:1342,126,0	1/1:1,18:19:45.11:483,45,0	0/0:30,0:30:87.24:0,87,1092	0/0:19,0:19:48.16:0,48,624	0/0:15,0:15:36.12:0,36,468	0/0:24,0:24:63.19:0,63,793	1/1:3,26:29:78.16:819,78,0	1/1:1,26:27:72.18:772,72,0	1/1:1,17:18:48.12:515,48,0
chr10	41060806	.	GCT	G	3110.43	PASS	AB=0.900;AC=17;AF=0.304;AN=56;BaseQRankSum=10.799;DP=413;FS=24.669;HRun=0;HaplotypeScore=56.1135;InbreedingCoeff=0.9028;MQ=82.19;MQ0=1;MQRankSum=0.448;QD=23.93;ReadPosRankSum=2.258;VQSLOD=2.0658;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:87.20:0,87,1287	0/0:7,0:7:21.06:0,21,326	0/0:22,0:20:36.09:0,36,512	0/0:15,0:15:16.08:0,16,183	0/0:20,0:20:51.13:0,51,778	0/0:18,0:18:48.14:0,48,753	0/0:12,0:12:27.08:0,27,419	0/0:17,0:17:42.12:0,42,636	1/1:0,8:8:21.07:270,21,0	1/1:3,17:20:51.16:644,51,0	1/1:3,16:19:45.06:541,45,0	0/0:15,0:15:42.13:0,42,678	1/1:2,9:11:21.07:270,21,0	0/0:12,0:12:27.08:0,27,422	1/1:1,8:9:24.08:309,24,0	0/0:8,0:8:21.06:0,21,326	0/1:16,2:18:28.99:29,0,594	1/1:2,10:11:27.09:347,27,0	0/0:10,0:10:21.07:0,21,352	0/0:22,0:22:63.20:0,63,1026	0/0:15,0:15:33.08:0,33,501	1/1:1,17:18:42.01:484,42,0	0/0:7,0:7:21.05:0,21,324	0/0:8,0:8:18.04:0,18,274	1/1:3,12:15:33.11:425,33,0	0/0:14,0:14:39.13:0,39,624	0/0:19,0:19:57.16:0,57,884	0/0:7,0:7:12.04:0,12,201
chr10	41060929	.	AC	A	285.78	PASS	AC=8;AF=0.148;AN=54;BaseQRankSum=3.023;DP=108;FS=0.000;HRun=6;HaplotypeScore=14.6839;InbreedingCoeff=0.5275;MQ=73.04;MQ0=0;MQRankSum=1.063;QD=17.86;ReadPosRankSum=2.722;VQSLOD=1.5403;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:8:21.07:0,21,276	./.	0/0:3,0:3:2.60:0,3,51	0/0:8,0:4:6.02:0,6,79	1/1:0,7:7:21.05:226,21,0	0/0:2,0:2:6.02:0,6,79	0/0:7,0:7:21.07:0,21,276	0/0:3,0:3:6.02:0,6,79	0/0:2,0:2:6.02:0,6,79	0/0:1,0:1:3.01:0,3,39	0/0:2,0:2:3.01:0,3,39	0/0:6,0:6:13.28:0,13,161	0/0:7,0:7:17.61:0,18,195	1/1:0,4:4:6.02:64,6,0	0/0:4,0:4:9.03:0,9,117	1/1:0,3:3:6.02:64,6,0	1/1:0,2:2:6.02:64,6,0	0/0:3,0:3:9.03:0,9,118	0/0:2,0:2:6.02:0,6,76	0/0:6,0:6:15.05:0,15,197	0/0:8,0:8:24.08:0,24,316	0/0:3,0:3:6.02:0,6,79	0/0:2,0:2:6.02:0,6,79	0/0:2,0:2:6.02:0,6,79	0/0:5,0:5:15.05:0,15,197	0/0:3,0:3:9.03:0,9,118	0/0:3,0:3:5.98:0,6,59	0/0:2,0:2:5.98:0,6,59
chr10	41063580	.	CAAA	C	2870.27	PASS	AB=0.960;AC=26;AF=0.464;AN=56;BaseQRankSum=-8.510;DP=467;FS=6.351;HRun=12;HaplotypeScore=85.5650;InbreedingCoeff=0.8423;MQ=64.06;MQ0=18;MQRankSum=0.179;QD=13.54;ReadPosRankSum=4.272;VQSLOD=1.6062;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:10:24.50:0,24,167	0/0:7,0:8:21.05:0,21,362	0/1:57,0:19:0.21:0,0,105	0/0:63,0:17:16.82:0,17,140	1/1:5,11:17:32.53:348,33,0	0/0:4,0:8:12.04:0,12,172	0/0:5,0:7:11.91:0,12,102	0/0:30,0:29:60.59:0,61,732	1/1:1,8:9:21.04:265,21,0	1/1:4,6:10:18.03:290,18,0	1/1:4,12:14:32.94:390,33,0	0/0:3,0:10:11.95:0,12,92	1/1:1,3:3:9.03:114,9,0	1/1:3,10:14:23.63:335,24,0	1/1:1,7:9:13.57:185,14,0	1/1:2,9:11:21.04:263,21,0	1/1:3,15:17:27.09:341,27,0	1/1:6,6:11:7.49:179,7,0	0/0:25,0:24:51.83:0,52,680	0/0:19,0:19:51.09:0,51,683	0/0:2,0:2:0:0,0,0	1/1:1,3:3:9.03:114,9,0	0/0:9,0:13:29.35:0,29,255	0/0:3,0:7:11.46:0,11,78	1/1:6,7:11:18.12:255,18,0	0/1:14,1:14:1.78:2,0,403	0/0:25,0:25:56.86:0,57,776	0/0:14,0:15:38.12:0,38,510
chr10	41063680	.	AT	A	1011.55	PASS	AB=0.667;AC=13;AF=0.250;AN=52;BaseQRankSum=2.166;DP=533;FS=10.818;HRun=3;HaplotypeScore=39.8883;InbreedingCoeff=0.6804;MQ=27.93;MQ0=149;MQRankSum=-1.053;QD=9.54;ReadPosRankSum=0.319;VQSLOD=-0.1040;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:6:9.03:0,9,129	0/0:10,0:7:18.01:0,18,216	./.	./.	0/0:29,0:25:48.16:0,48,688	0/0:22,0:20:30.02:0,30,404	0/0:20,0:7:9.03:0,9,129	0/0:30,0:5:15.05:0,15,216	1/1:3,6:2:6.02:74,6,0	0/1:10,10:14:32.97:255,0,33	1/1:2,19:15:24.07:296,24,0	0/0:13,0:8:17.98:0,18,213	1/1:5,11:5:9.03:110,9,0	0/0:12,0:5:12.04:0,12,173	1/1:10,6:5:3.01:37,3,0	0/0:12,0:3:6.02:0,6,86	0/0:26,0:9:3.01:0,3,43	0/0:7,6:2:3.01:0,3,43	0/0:22,0:13:30.10:0,30,431	0/0:26,0:16:30.07:0,30,385	0/0:30,0:9:9.03:0,9,124	1/1:1,7:6:12.04:148,12,0	0/0:16,0:13:30.03:0,30,405	0/0:17,0:3:5.95:0,6,61	1/1:1,15:10:21.07:257,21,0	0/0:29,1:15:42.14:0,42,604	0/0:37,0:25:56.78:0,57,788	0/0:28,0:16:39.06:0,39,483
chr10	41063780	.	C	CA	235.36	PASS	AC=4;AF=0.083;AN=48;BaseQRankSum=-0.916;DP=495;FS=20.609;HRun=7;HaplotypeScore=38.0523;InbreedingCoeff=0.6098;MQ=25.35;MQ0=146;MQRankSum=0.572;QD=6.72;ReadPosRankSum=-0.506;VQSLOD=-0.3832;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:13:27.04:0,27,261	0/0:3,0:3:9.01:0,9,87	./.	./.	0/0:22,0:15:18.03:0,18,174	1/1:0,18:15:18.01:201,18,0	1/1:7,10:5:12.04:145,12,0	0/0:49,0:14:39.06:0,39,376	0/0:14,0:8:9.01:0,9,87	0/0:16,0:11:27.04:0,27,261	0/0:15,0:12:21.03:0,21,203	0/0:19,0:13:23.92:0,24,231	0/0:18,0:9:17.98:0,18,174	0/0:17,0:11:15.01:0,15,145	0/0:16,0:6:12.02:0,12,116	0/0:18,0:11:21.03:0,21,203	./.	./.	0/0:20,0:8:0.41:0,0,93	0/0:19,0:19:36.05:0,36,347	0/0:25,0:6:12.01:0,12,116	0/0:9,0:5:3:0,3,29	0/0:16,0:11:3:0,3,29	0/0:12,0:2:3:0,3,29	0/0:23,0:19:41.96:0,42,405	0/0:21,0:15:42.07:0,42,405	0/0:36,0:27:47.91:0,48,453	0/0:12,0:5:15.02:0,15,145
chr10	41063892	.	GA	G	1299.66	PASS	AB=0.706;AC=17;AF=0.304;AN=56;BaseQRankSum=4.803;DP=638;FS=8.327;HRun=10;HaplotypeScore=63.4142;InbreedingCoeff=0.3156;MQ=42.37;MQ0=59;MQRankSum=-1.533;QD=5.70;ReadPosRankSum=-4.645;VQSLOD=-0.0607;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:26,2:28:17.09:0,17,645	0/0:9,0:8:21.05:0,21,225	0/0:7,0:5:6.01:0,6,64	0/0:16,0:10:11.97:0,12,110	0/1:9,12:18:99:149,0,100	0/0:25,0:25:60.16:0,60,661	0/0:12,0:11:27.03:0,27,285	0/0:59,0:39:99:0,114,1252	1/1:2,6:8:1.65:113,2,0	0/1:23,16:24:99:223,0,269	0/1:7,10:13:45.29:108,0,45	0/0:33,1:28:29.34:0,29,560	0/1:7,8:8:18.15:88,0,18	0/1:20,6:12:99:125,0,103	0/1:25,6:13:67.47:67,0,229	0/1:11,11:12:39.31:155,0,39	1/1:7,6:7:18:156,18,0	1/1:1,3:4:6:52,6,0	0/0:35,0:20:53.93:0,54,564	0/0:34,0:31:72.18:0,72,788	0/0:13,0:14:24.35:0,24,294	1/1:7,5:7:11.02:83,11,0	0/0:18,0:15:27.05:0,27,287	0/0:14,0:13:33.09:0,33,365	1/1:7,10:12:17.98:156,18,0	0/0:39,1:31:54.94:0,55,791	0/0:43,0:32:80.96:0,81,873	0/0:18,0:15:36.10:0,36,398
chr10	41064852	.	GGTGT	G	1020.08	PASS	AB=0.914;AC=22;AF=0.440;AN=50;BaseQRankSum=1.715;DP=595;FS=3.816;HRun=0;HaplotypeScore=137.3861;InbreedingCoeff=-0.1283;MQ=70.16;MQ0=25;MQRankSum=0.305;QD=2.78;ReadPosRankSum=-1.002;VQSLOD=2.2637;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:28.85:0,29,219	0/0:7,0:8:8.77:0,9,138	./.	./.	1/1:13,0:10:4.33:125,4,0	0/1:11,5:17:32.54:33,0,43	0/1:20,0:24:44.73:45,0,67	1/1:26,0:21:1.76:18,2,0	0/1:16,0:16:23.90:24,0,49	0/0:21,0:21:2.17:0,2,142	1/1:9,0:10:2.60:10,3,0	0/0:15,0:15:13.90:0,14,158	0/1:18,2:19:25.67:26,0,41	0/1:8,0:20:9.36:55,0,9	0/1:22,0:22:19.92:20,0,99	0/1:17,0:18:5.42:116,0,5	0/1:33,0:31:52.52:244,0,53	0/1:21,0:22:17.72:42,0,18	0/0:20,0:19:5.69:0,6,55	0/0:11,0:11:2.74:0,3,12	0/1:52,1:49:24.23:87,0,24	./.	0/0:16,0:16:5.38:0,5,63	0/0:18,0:16:14.11:0,14,195	0/1:14,0:13:12.70:13,0,28	0/1:25,0:21:0.47:32,0,0	1/1:17,6:23:5.68:195,6,0	1/1:7,1:8:3.69:85,4,0
chr10	41064879	.	GTGTGTGTGTGTGTGTGTGTC	G	1972.99	PASS	AB=0.972;AC=20;AF=0.385;AN=52;BaseQRankSum=-3.281;DP=586;FS=1.003;HRun=0;HaplotypeScore=264.7015;InbreedingCoeff=0.0882;MQ=45.83;MQ0=51;MQRankSum=-3.723;QD=5.85;ReadPosRankSum=-4.334;VQSLOD=1.7908;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:22:33.99:34,0,332	0/0:11,0:9:21.04:0,21,964	./.	./.	0/0:28,0:23:44.88:0,45,732	0/0:27,0:24:25.25:0,25,977	0/0:24,0:22:17.13:0,17,279	0/1:24,0:15:4.42:140,0,4	0/1:17,0:13:6.73:7,0,377	0/0:24,0:23:37.05:0,37,1068	0/0:17,0:17:9.02:0,9,286	0/1:14,0:18:64.70:65,0,98	0/1:32,0:29:10.71:11,0,531	0/0:24,0:24:30.06:0,30,767	0/0:25,0:24:24.55:0,25,811	0/0:21,0:21:37.73:0,38,752	0/0:32,0:29:55.80:0,56,1101	0/1:20,0:20:1.32:1,0,424	0/1:10,0:9:57.71:58,0,106	1/1:2,12:14:1.55:4,2,0	1/1:51,0:43:13.80:509,14,0	0/1:18,0:17:4.86:5,0,206	0/1:14,0:12:8.93:9,0,44	0/1:14,0:14:30.63:31,0,101	0/1:22,0:18:12.44:12,0,368	1/1:20,0:14:32.70:389,33,0	1/1:28,0:24:39.15:568,39,0	0/1:9,0:8:5.47:294,0,5
chr10	41064883	.	G	GTC	721.05	PASS	AB=0.930;AC=11;AF=0.212;AN=52;BaseQRankSum=1.651;DP=596;FS=5.526;HRun=0;HaplotypeScore=154.6973;InbreedingCoeff=-0.2748;MQ=45.67;MQ0=50;MQRankSum=3.560;QD=2.62;ReadPosRankSum=6.038;VQSLOD=1.4549;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:21:19.70:0,20,224	0/0:11,0:9:23.97:0,24,233	./.	./.	0/1:24,5:24:99:261,0,163	0/0:28,0:25:53.83:0,54,430	0/0:26,0:24:33.30:0,33,274	0/1:26,0:17:17.38:17,0,160	0/0:15,0:11:22.70:0,23,165	0/0:25,0:24:55.29:0,55,410	0/0:17,0:17:5.21:0,5,17	0/1:23,0:23:74.92:75,0,144	0/0:31,0:28:40.65:0,41,246	0/0:25,0:25:22.18:0,22,206	0/0:26,0:25:23.67:0,24,196	0/1:11,10:21:99:165,0,151	0/1:18,14:29:99:182,0,200	0/1:20,0:19:9.51:10,0,154	0/1:13,0:11:20.12:20,0,160	0/1:14,0:14:13:13,0,18	0/1:51,0:43:99:105,0,188	0/0:18,0:17:10.07:0,10,39	0/0:13,0:11:8.74:0,9,57	0/1:18,0:15:1.90:2,0,85	0/0:21,0:17:2.92:0,3,92	0/0:24,0:17:13.42:0,13,253	0/1:28,0:24:7.59:8,0,204	0/0:10,0:9:4.93:0,5,103
chr10	41064885	.	G	GTC	632.13	PASS	AB=0.979;AC=13;AF=0.250;AN=52;BaseQRankSum=2.693;DP=584;FS=1.749;HRun=0;HaplotypeScore=159.6562;InbreedingCoeff=-0.0560;MQ=45.68;MQ0=47;MQRankSum=3.290;QD=2.34;ReadPosRankSum=2.762;VQSLOD=2.8507;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:19:24.22:0,24,249	0/0:11,0:9:20.98:0,21,210	./.	./.	0/1:30,0:25:0.65:1,0,203	0/0:28,0:25:53.76:0,54,427	0/0:24,0:22:36.65:0,37,294	0/1:24,0:16:29.85:30,0,146	0/1:16,0:12:34.61:35,0,89	0/0:25,0:24:0.69:0,1,269	1/1:17,0:17:1.41:4,1,0	0/0:23,0:23:50.12:0,50,278	0/1:31,0:28:92.63:93,0,99	0/0:26,0:26:35.01:0,35,275	0/0:26,0:25:3.96:0,4,125	0/0:20,0:20:26.77:0,27,222	0/0:31,0:28:47.62:0,48,446	0/0:19,0:18:0.40:0,0,125	0/0:12,0:10:19.30:0,19,185	0/0:13,0:13:2.80:0,3,13	0/1:47,3:42:99:183,0,115	1/1:17,0:16:11.98:98,12,0	0/0:14,0:12:7.96:0,8,47	0/0:17,0:14:27.59:0,28,142	0/1:20,0:16:6.66:7,0,75	0/1:23,0:16:54.78:55,0,178	0/1:29,0:25:29.69:214,0,30	0/1:11,1:12:51.83:52,0,89
chr10	41064897	.	GTC	G	2368.97	PASS	AB=0.965;AC=32;AF=0.640;AN=50;BaseQRankSum=-0.064;DP=567;FS=3.248;HRun=0;HaplotypeScore=145.9975;InbreedingCoeff=0.1479;MQ=45.06;MQ0=49;MQRankSum=1.433;QD=5.23;ReadPosRankSum=-4.601;VQSLOD=1.9819;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:19:9.87:207,10,0	0/1:10,0:8:7.96:8,0,192	./.	./.	0/0:29,0:25:37.96:0,38,342	0/1:28,0:25:4.77:5,0,252	0/1:25,1:24:1.24:1,0,223	0/1:16,9:15:19.30:122,0,19	1/1:19,0:15:1:27,1,0	0/1:21,1:21:28.15:183,0,28	1/1:17,0:17:8.97:70,9,0	0/1:21,0:21:99:203,0,109	1/1:27,2:26:3.13:106,3,0	0/0:27,0:27:41.42:0,41,322	1/1:26,1:26:6.18:211,6,0	0/0:16,0:16:28.59:0,29,259	0/0:27,0:24:26.22:0,26,309	1/1:18,0:17:12.91:172,13,0	0/1:14,0:10:46.61:47,0,63	./.	1/1:42,0:35:17.93:163,18,0	0/1:20,0:19:3.49:8,0,3	0/1:15,0:13:31.15:51,0,31	0/1:17,0:14:79.36:79,0,119	1/1:20,0:16:24.05:171,24,0	1/1:22,0:16:8.45:250,8,0	1/1:26,0:22:10.95:218,11,0	1/1:15,0:14:32.34:233,32,0
chr10	41064905	.	GTC	G	1409.97	PASS	AB=0.953;AC=20;AF=0.357;AN=56;BaseQRankSum=5.427;DP=567;FS=21.409;HRun=0;HaplotypeScore=141.2269;InbreedingCoeff=0.1467;MQ=45.43;MQ0=46;MQRankSum=0.352;QD=5.09;ReadPosRankSum=1.269;VQSLOD=1.8563;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:16:2.43:203,2,0	0/0:10,0:8:0.14:0,0,323	1/1:4,0:1:2.88:15,3,0	0/1:6,0:5:8.87:9,0,53	0/0:31,0:27:41.03:0,41,877	0/0:27,0:24:45.49:0,45,820	0/0:24,0:22:42.10:0,42,665	0/0:26,0:18:53.52:0,54,457	0/1:8,10:15:3.98:184,0,4	0/1:18,1:18:84.87:85,0,231	0/1:20,0:20:6.47:6,0,89	0/1:22,0:22:1.53:248,0,2	1/1:17,12:26:11.84:345,12,0	0/0:24,0:24:42.14:0,42,736	0/1:27,0:26:23.45:23,0,186	0/0:15,0:15:39.12:0,39,653	0/0:24,1:22:53.97:0,54,783	0/1:15,1:15:38.38:38,0,131	0/0:17,0:11:29.76:0,30,360	0/0:13,0:13:3:0,3,25	0/0:44,0:37:17.77:0,18,290	1/1:5,17:22:12.04:180,12,0	1/1:15,0:13:2.91:75,3,0	0/1:17,0:14:15.62:112,0,16	0/1:20,0:16:37.92:38,0,100	0/0:20,0:16:42.83:0,43,384	0/1:25,0:21:14.45:14,0,230	0/0:14,0:13:12.09:0,12,180
chr10	41064907	.	CTG	C	591.48	PASS	AB=0.914;AC=13;AF=0.232;AN=56;BaseQRankSum=6.927;DP=575;FS=16.748;HRun=0;HaplotypeScore=145.7450;InbreedingCoeff=0.3356;MQ=45.71;MQ0=45;MQRankSum=-0.602;QD=3.18;ReadPosRankSum=3.264;VQSLOD=1.7384;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:17:4.76:0,5,38	0/0:11,0:9:22.63:0,23,351	0/0:4,0:1:0.89:0,1,2	0/0:6,0:5:13.22:0,13,154	0/0:31,0:27:54.10:0,54,857	0/0:25,0:22:48.16:0,48,826	0/0:25,0:23:39.13:0,39,654	0/0:28,0:20:56.81:0,57,695	1/1:16,2:15:14.75:147,15,0	0/1:16,4:19:99:144,0,403	0/0:15,5:20:15.05:0,15,223	0/0:20,1:21:1.82:0,2,5	1/1:21,7:26:13.32:270,13,0	0/0:24,0:24:41.17:0,41,696	0/1:25,2:26:15.13:15,0,339	0/0:14,0:14:39.05:0,39,585	0/0:25,0:22:54.15:0,54,770	0/1:14,1:15:17.09:17,0,239	0/0:18,0:12:32.90:0,33,387	0/0:14,0:14:6.02:0,6,95	0/0:44,1:38:10.42:0,10,524	1/1:19,3:22:11.91:85,12,0	1/1:16,0:14:2.86:15,3,0	0/0:16,1:14:3.07:0,3,13	0/0:19,2:17:1.35:0,1,276	0/0:22,0:18:47.96:0,48,705	0/1:21,4:21:46.83:47,0,435	0/1:14,0:13:11.40:11,0,319
chr10	41065118	.	A	ATT	8648.70	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-4.655;DP=580;FS=3.396;HRun=9;HaplotypeScore=87.3329;InbreedingCoeff=0.9593;MQ=71.78;MQ0=0;MQRankSum=-2.966;QD=19.88;ReadPosRankSum=-0.521;VQSLOD=3.8329;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,0:11:22.46:77,22,0	0/0:7,0:7:21.05:0,21,223	0/0:15,0:15:27.26:0,27,268	0/0:11,0:11:7.11:0,7,138	0/0:25,0:25:35.79:0,36,582	0/0:25,0:25:66.16:0,66,702	0/0:15,0:15:39.06:0,39,398	1/1:9,26:38:84.18:1184,84,0	1/1:1,0:18:37.43:128,37,0	1/1:6,0:36:72.12:248,72,0	1/1:3,0:23:44.92:154,45,0	1/1:2,0:19:37.43:128,37,0	1/1:0,1:11:25.47:124,25,0	0/0:12,0:12:30.07:0,30,319	1/1:5,0:22:37.43:128,37,0	0/0:13,0:13:39.07:0,39,399	0/0:21,0:21:57.12:0,57,606	1/1:1,0:19:42.42:145,42,0	1/1:2,18:22:59.64:804,60,0	1/1:5,27:34:86.74:1259,87,0	1/1:0,9:12:34.58:441,35,0	1/1:3,0:21:42.42:145,42,0	1/1:0,0:30:63.18:232,63,0	1/1:0,0:12:27.45:94,27,0	1/1:3,0:20:3.39:79,3,0	1/1:1,27:29:77.75:1163,78,0	1/1:5,33:38:84.22:1282,84,0	1/1:1,18:19:54.18:831,54,0
chr10	41065946	.	AT	A	5195.27	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-2.051;DP=529;FS=2.979;HRun=8;HaplotypeScore=67.3591;InbreedingCoeff=0.9731;MQ=75.54;MQ0=0;MQRankSum=-0.866;QD=23.61;ReadPosRankSum=0.817;VQSLOD=5.6201;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,18:22:30.67:469,31,0	0/0:3,0:3:9.03:0,9,109	0/0:10,0:10:24.05:0,24,268	0/0:14,0:13:23.89:0,24,272	0/0:23,0:23:66.20:0,66,797	0/0:25,0:25:69.19:0,69,812	0/0:16,0:16:42.12:0,42,497	1/1:5,27:32:81.05:767,81,0	0/0:20,0:20:54.17:0,54,652	0/0:24,1:25:40.21:0,40,748	0/0:26,0:26:69.20:0,69,823	1/1:1,12:13:36.06:348,36,0	0/0:14,0:14:39.12:0,39,471	0/0:15,0:15:39.11:0,39,460	0/0:19,0:19:54.14:0,54,638	0/0:17,0:17:48.15:0,48,580	0/0:24,0:24:69.21:0,69,832	0/0:21,0:21:57.17:0,57,688	1/1:5,17:22:51.07:492,51,0	1/1:3,26:29:78.12:752,78,0	1/1:1,6:7:15.02:145,15,0	0/0:16,0:16:45.11:0,45,520	1/1:6,14:20:36.05:347,36,0	1/1:0,19:19:57.09:550,57,0	0/0:20,0:21:57.04:0,57,667	1/1:2,13:15:5.83:340,6,0	1/1:2,24:26:63.10:608,63,0	1/1:2,13:15:39.06:377,39,0
chr10	41067292	.	CACACTGTGTATTTG	C	25476.84	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=18.619;DP=635;FS=2.715;HRun=0;HaplotypeScore=263.1206;InbreedingCoeff=0.9972;MQ=70.06;MQ0=0;MQRankSum=-19.201;QD=86.66;ReadPosRankSum=3.138;VQSLOD=4.1198;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,24:31:57.20:2292,57,0	0/0:8,0:8:24.08:0,24,1591	0/0:18,0:18:51.17:0,51,2789	0/0:24,0:23:69.23:0,69,3400	0/0:29,0:29:81.28:0,81,5600	1/1:3,8:11:18.06:778,18,0	1/1:6,18:24:51.18:1967,51,0	0/0:33,0:33:93.31:0,93,5566	1/1:3,20:23:57.19:2465,57,0	1/1:1,14:15:35.84:1410,36,0	1/1:1,11:12:27.09:893,27,0	1/1:5,31:36:81.28:3501,81,0	1/1:7,19:26:54.19:2331,54,0	0/0:31,0:31:90.31:0,90,5681	1/1:2,36:38:90.31:3891,90,0	0/0:28,0:28:81.24:0,81,4894	0/0:32,0:32:96.33:0,96,6597	1/1:2,8:10:21.07:831,21,0	0/0:24,0:24:66.22:0,66,3700	0/0:17,0:17:51.18:0,51,3367	0/0:37,0:37:99:0,108,7412	1/1:2,16:18:45.15:1620,45,0	1/1:2,19:21:41.55:1736,42,0	1/1:5,14:19:27.09:856,27,0	1/1:2,8:10:21.07:908,21,0	0/0:25,0:25:72.25:0,72,5100	0/0:22,0:22:63.22:0,63,4332	0/0:13,0:13:35.92:0,36,2354
chr10	41068363	.	G	GT	10248.09	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-16.099;DP=691;FS=4.403;HRun=6;HaplotypeScore=63.9731;InbreedingCoeff=0.9994;MQ=80.96;MQ0=0;MQRankSum=-2.412;QD=31.24;ReadPosRankSum=4.810;VQSLOD=5.3399;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,27:29:72.23:906,72,0	0/0:11,0:11:33.08:0,33,337	0/0:23,0:24:62.10:0,62,601	0/0:27,0:27:22.43:0,22,524	1/1:3,32:35:87.23:1068,87,0	1/1:1,29:30:78.25:977,78,0	1/1:3,22:25:57.18:717,57,0	0/0:25,0:25:63.11:0,63,631	0/0:21,0:21:57.13:0,57,581	1/1:2,37:40:99:1381,111,0	1/1:2,21:23:54.17:679,54,0	0/0:24,0:24:66.13:0,66,667	0/0:17,0:17:51.12:0,51,520	1/1:0,23:23:66.21:830,66,0	1/1:3,30:33:81.26:1019,81,0	1/1:1,14:15:36.12:453,36,0	1/1:2,24:26:63.20:793,63,0	1/1:2,19:21:45.14:557,45,0	0/0:15,0:15:42.09:0,42,424	0/0:40,0:40:99:0,99,1009	0/0:21,0:21:57.12:0,57,581	0/0:28,0:28:78.16:0,78,788	0/0:18,0:18:51.11:0,51,520	0/0:24,0:24:72.12:0,72,724	1/1:4,24:28:69.22:868,69,0	0/0:26,1:27:40.42:0,40,721	0/0:30,0:30:81.18:0,81,825	0/0:11,0:11:26.99:0,27,275
chr10	41071269	.	AACACACACACACAC	A	272.59	PASS	AB=0.969;AC=11;AF=0.212;AN=52;BaseQRankSum=2.019;DP=422;FS=2.606;HRun=0;HaplotypeScore=145.1496;InbreedingCoeff=0.1554;MQ=61.35;MQ0=19;MQRankSum=0.250;QD=2.25;ReadPosRankSum=-0.135;VQSLOD=2.6161;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:43:27.05:0,27,663	0/0:7,0:7:3.01:0,3,83	./.	./.	0/0:10,0:10:6.02:0,6,182	0/0:15,0:15:15.05:0,15,451	0/0:20,0:18:3.01:0,3,107	0/0:22,0:21:1.72:0,2,3	0/1:11,1:11:7.73:112,0,8	0/1:19,0:17:31.33:44,0,31	0/0:7,0:6:2.90:0,3,16	0/0:6,0:5:12.01:0,12,139	1/1:15,0:15:3.89:60,4,0	0/0:11,0:11:8.56:0,9,295	1/1:12,0:11:3.46:26,3,0	0/0:14,0:12:18.06:0,18,821	0/0:20,0:19:21.05:0,21,599	0/1:18,0:16:14.20:20,0,14	0/0:13,0:16:10.85:0,11,142	0/0:10,0:10:5.31:0,5,57	0/0:13,0:13:6:0,6,73	1/1:6,2:7:3.90:118,4,0	0/0:10,0:9:6:0,6,68	0/1:25,0:25:8.42:8,0,33	0/1:11,1:12:17.17:17,0,29	0/0:11,0:9:8.96:0,9,93	0/0:10,0:9:9:0,9,119	0/0:8,0:7:5.60:0,6,28
chr10	41071965	.	G	GGTGTT	8613.66	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-9.839;DP=707;FS=5.827;HRun=0;HaplotypeScore=127.8803;InbreedingCoeff=0.9955;MQ=84.48;MQ0=1;MQRankSum=-3.274;QD=58.60;ReadPosRankSum=1.787;VQSLOD=5.6478;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:96.32:0,96,1846	0/0:7,0:7:15.04:0,15,262	0/0:24,0:23:48.16:0,48,931	0/0:29,0:29:66.23:0,66,1263	0/0:24,0:24:66.21:0,66,1266	1/1:5,14:20:39.13:1158,39,0	1/1:11,11:23:33.11:952,33,0	0/0:37,0:37:84.28:0,84,1610	0/0:33,0:33:81.22:0,81,1499	1/1:11,18:31:60.21:1672,60,0	1/1:2,14:17:42.14:1212,42,0	0/0:26,0:26:71.60:0,72,1348	0/0:32,0:32:69.24:0,69,1360	0/0:21,0:21:51.16:0,51,963	1/1:5,28:34:81.28:2396,81,0	0/0:29,0:29:75.26:0,75,1478	0/0:26,0:26:54.16:0,54,1028	1/1:2,8:10:21.07:599,21,0	0/0:28,0:28:66.19:0,66,1205	0/0:27,0:27:72.23:0,72,1371	0/0:30,0:30:66.13:0,66,1122	0/0:26,0:26:69.21:0,69,1287	0/0:19,0:19:51.18:0,51,1005	0/0:39,0:39:99:0,102,1987	1/1:4,7:12:21.07:624,21,0	0/0:19,0:19:45.15:0,45,887	0/0:36,0:35:87.30:0,87,1705	0/0:12,0:12:30.09:0,30,559
chr10	41072057	.	CTT	C	4518.16	PASS	AB=0.851;AC=42;AF=0.750;AN=56;BaseQRankSum=1.887;DP=488;FS=7.035;HRun=3;HaplotypeScore=87.5741;InbreedingCoeff=0.3609;MQ=53.17;MQ0=21;MQRankSum=6.297;QD=10.15;ReadPosRankSum=0.409;VQSLOD=1.2336;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:33,0:32:66.82:542,67,0	0/0:6,0:6:15.32:0,15,88	0/0:8,0:2:6.01:0,6,57	0/0:16,0:8:11.48:0,11,107	1/1:10,0:10:23.95:195,24,0	1/1:19,0:19:38.78:321,39,0	1/1:17,0:15:20.71:152,21,0	0/1:24,0:23:22.80:205,0,23	0/1:24,0:24:86.73:87,0,331	1/1:14,0:14:41.73:358,42,0	1/1:13,0:12:17.97:148,18,0	0/1:5,16:21:14.82:15,0,24	0/1:22,0:20:10.37:10,0,267	1/1:11,0:10:8.58:74,9,0	1/1:11,0:11:17.88:139,18,0	1/1:16,0:16:26.60:208,27,0	1/1:9,0:9:11.98:98,12,0	1/1:13,0:13:35.75:266,36,0	0/1:17,0:17:26.50:173,0,26	1/1:10,0:10:7.99:69,8,0	1/1:35,0:31:64.83:490,65,0	0/0:13,0:13:16.20:0,16,223	1/1:21,0:21:4.56:43,5,0	1/1:27,1:26:20.73:202,21,0	1/1:16,0:14:32.65:269,33,0	1/1:22,1:22:27.03:355,27,0	0/1:4,24:27:11.60:33,0,12	1/1:10,0:5:10.14:65,10,0
chr10	41072059	.	TTCTC	T	2602.54	PASS	AB=0.696;AC=16;AF=0.286;AN=56;BaseQRankSum=1.072;DP=485;FS=1.999;HRun=0;HaplotypeScore=106.4181;InbreedingCoeff=0.3974;MQ=53.66;MQ0=21;MQRankSum=3.169;QD=12.28;ReadPosRankSum=-0.755;VQSLOD=2.8248;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:33:4.77:0,5,45	0/0:6,0:6:15.01:0,15,193	0/0:8,0:2:6.02:0,6,115	0/0:16,0:8:12.34:0,12,211	0/0:10,0:10:0:0,0,0	0/0:18,0:18:0.33:0,0,1	0/0:19,0:17:9.81:0,10,58	1/1:8,16:23:47.09:583,47,0	0/0:23,0:23:47.64:0,48,769	0/0:14,0:14:0.35:0,0,1	0/0:12,0:11:3.66:0,4,26	1/1:20,0:20:3.73:47,4,0	0/0:22,0:20:48.64:0,49,710	0/0:11,0:10:1.86:0,2,22	0/0:12,0:12:6.46:0,6,51	0/0:15,0:15:2.19:0,2,6	0/0:8,0:8:0:0,0,0	0/0:13,0:13:1.63:0,2,5	1/1:4,11:15:32.89:424,33,0	0/1:4,6:10:10.68:97,0,11	0/1:35,0:31:23.40:746,0,23	0/0:13,0:13:26.06:0,26,454	0/1:4,16:20:14.09:14,0,19	1/1:10,18:26:8.29:85,8,0	0/0:19,0:17:5.97:0,6,50	0/1:8,15:22:4.35:604,0,4	1/1:28,0:26:7.74:75,8,0	1/1:9,0:4:6.02:87,6,0
chr10	41072761	.	GC	G	2542.03	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=6.986;DP=654;FS=5.768;HRun=2;HaplotypeScore=70.7100;InbreedingCoeff=0.9871;MQ=85.58;MQ0=0;MQRankSum=-2.633;QD=26.76;ReadPosRankSum=0.385;VQSLOD=3.0674;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:96.30:0,96,1393	0/0:5,0:5:15.05:0,15,221	0/0:27,0:27:74.94:0,75,1009	0/0:17,0:17:47.81:0,48,647	1/1:2,32:34:74.14:797,74,0	0/0:28,0:28:84.18:0,84,1184	0/0:29,0:29:75.24:0,75,1103	0/0:20,0:20:54.12:0,54,730	0/0:20,0:20:60.12:0,60,811	0/0:37,0:37:99:0,108,1517	0/0:26,0:26:75.25:0,75,1101	0/0:24,0:24:72.21:0,72,1054	0/0:26,0:26:69.22:0,69,1006	1/1:0,22:22:42.14:544,42,0	0/0:19,0:19:57.15:0,57,808	1/1:0,23:23:63.20:817,63,0	1/1:1,15:16:42.14:544,42,0	0/0:21,0:21:60.19:0,60,878	0/0:19,0:19:57.18:0,57,830	0/0:27,0:27:81.24:0,81,1189	0/0:23,0:23:69.18:0,69,985	0/0:31,0:31:93.31:0,93,1391	0/0:28,0:28:78.01:0,78,1103	0/0:17,0:17:48.02:0,48,621	0/0:23,0:23:66.21:0,66,967	0/0:23,0:23:69.09:0,69,954	0/0:33,0:33:96.29:0,96,1366	0/0:4,0:4:12.04:0,12,176
chr10	41073527	.	C	CG	4592.26	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-11.864;DP=623;FS=5.723;HRun=8;HaplotypeScore=68.4985;InbreedingCoeff=0.9749;MQ=89.74;MQ0=0;MQRankSum=-2.258;QD=22.96;ReadPosRankSum=1.125;VQSLOD=5.6346;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,108,980	0/0:10,0:10:20.80:0,21,177	0/0:25,0:24:50.91:0,51,452	0/0:33,1:34:19.73:0,20,365	1/1:5,15:21:39.05:433,39,0	1/1:3,19:22:57.17:658,57,0	1/1:5,27:33:44.70:752,45,0	0/0:20,0:20:41.98:0,42,371	0/0:29,0:29:81.02:0,81,735	0/0:27,0:27:60.02:0,60,548	0/0:16,0:16:45.02:0,45,411	1/1:4,18:22:48.14:554,48,0	0/0:25,0:25:75.04:0,75,686	1/1:4,18:22:17.67:457,18,0	0/0:22,0:22:66.04:0,66,604	1/1:7,14:21:33.10:381,33,0	1/1:4,22:26:29.75:596,30,0	0/0:24,0:24:62.87:0,63,551	0/0:13,0:13:30.01:0,30,274	0/0:24,0:24:64.16:0,64,563	0/0:21,0:21:11.38:0,11,262	0/0:14,0:14:42.01:0,42,378	1/1:4,13:17:33.10:381,33,0	1/1:2,14:16:33.10:381,33,0	0/0:16,0:16:39.01:0,39,357	0/0:24,0:24:56.96:0,57,508	0/0:26,0:26:66:0,66,600	0/0:6,0:6:5.98:0,6,55
chr10	41074432	.	T	TG	4460.03	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-3.076;DP=835;FS=18.635;HRun=4;HaplotypeScore=80.1620;InbreedingCoeff=0.9914;MQ=93.20;MQ0=0;MQRankSum=-2.132;QD=36.26;ReadPosRankSum=2.788;VQSLOD=3.0723;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,120,1343	0/0:11,0:11:33.08:0,33,363	0/0:43,0:43:99:0,114,1245	0/0:30,0:30:81.16:0,81,869	1/1:1,26:27:75.08:951,75,0	0/0:36,0:36:99:0,102,1115	0/0:24,0:24:63.14:0,63,688	0/0:28,0:28:72.18:0,72,789	0/0:33,0:33:93.25:0,93,1046	0/0:37,0:37:96.26:0,96,1075	0/0:15,0:15:39.08:0,39,430	0/0:36,0:36:99:0,108,1191	0/0:37,0:37:99:0,99,1106	1/1:1,25:27:72.24:972,72,0	0/0:46,0:46:99:0,138,1518	1/1:0,39:39:99:1513,111,0	1/1:2,28:30:75.25:1025,75,0	0/0:26,0:26:69.17:0,69,769	0/0:19,0:19:48.12:0,48,535	0/0:28,0:28:81.18:0,81,887	0/0:32,0:32:90.20:0,90,977	0/0:21,0:21:63.18:0,63,714	0/0:24,0:24:69.20:0,69,782	0/0:32,0:32:93.24:0,93,1029	0/0:31,0:31:90.21:0,90,991	0/0:37,0:37:99:0,111,1233	0/0:40,0:39:99:0,114,1270	0/0:4,0:4:12.03:0,12,136
chr10	41074535	.	TGC	T	541.07	PASS	AB=0.922;AC=8;AF=0.143;AN=56;BaseQRankSum=4.659;DP=915;FS=1.167;HRun=0;HaplotypeScore=136.9267;InbreedingCoeff=0.5127;MQ=56.13;MQ0=12;MQRankSum=-0.516;QD=3.68;ReadPosRankSum=-4.248;VQSLOD=1.6180;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,115,2231	0/0:11,0:11:15.11:0,15,522	0/0:60,0:26:52.98:0,53,717	0/0:57,0:29:20.95:0,21,669	1/1:23,2:25:9.27:86,9,0	0/1:28,3:31:99:217,0,334	0/1:26,3:29:99:265,0,199	0/0:31,0:31:90.05:0,90,1334	0/0:46,1:47:99:0,120,2165	0/0:36,0:36:99:0,105,1610	0/0:27,0:27:65:0,65,1202	0/0:46,0:45:99:0,109,1969	0/0:35,0:35:99:0,105,1691	0/1:17,3:20:0.05:0,0,0	0/0:32,0:32:94.35:0,94,1451	1/1:29,0:28:8.31:88,8,0	0/1:13,0:13:3.59:16,0,4	0/0:30,0:30:8.68:0,9,997	0/0:16,0:16:32.85:0,33,402	0/0:34,0:34:99:0,99,1528	0/0:71,0:71:99:0,190,3055	0/0:24,0:24:69.11:0,69,1161	0/0:19,0:19:44.94:0,45,586	0/0:51,0:51:99:0,147,2257	0/0:21,0:21:42.89:0,43,735	0/0:34,0:34:93:0,93,1375	0/0:22,0:22:65.78:0,66,990	0/0:10,0:10:27.06:0,27,468
chr10	41074549	.	C	CAT	544.88	PASS	AB=0.690;AC=6;AF=0.107;AN=56;BaseQRankSum=6.075;DP=920;FS=19.062;HRun=0;HaplotypeScore=141.1231;InbreedingCoeff=0.5831;MQ=55.92;MQ0=14;MQRankSum=-0.629;QD=6.64;ReadPosRankSum=1.338;VQSLOD=2.2518;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,150,2370	0/0:14,0:14:36.08:0,36,558	0/0:72,0:28:68.65:0,69,1025	0/0:64,0:34:89.27:0,89,1347	1/1:2,16:19:14.78:255,15,0	0/0:28,0:28:84.27:0,84,1327	0/0:30,0:30:81.24:0,81,1264	0/0:37,0:37:99:0,105,1675	0/0:43,0:43:99:0,117,1885	0/0:31,0:31:93.30:0,93,1465	0/0:30,0:30:81.26:0,81,1273	0/0:40,0:39:99:0,114,1817	0/0:34,0:34:99:0,102,1626	1/1:10,14:24:2.69:60,3,0	0/0:28,0:28:84.24:0,84,1328	0/1:14,13:26:59.59:182,0,60	0/1:7,5:12:5.79:170,0,6	0/0:27,0:27:73.41:0,73,1195	0/0:15,0:15:45.14:0,45,702	0/0:35,0:35:99:0,99,1613	0/0:67,0:67:99:0,199,3188	0/0:30,0:30:90.30:0,90,1440	0/0:17,0:17:36.46:0,36,588	0/0:56,0:56:99:0,157,2534	0/0:22,0:22:59.76:0,60,922	0/0:32,0:32:96.31:0,96,1529	0/0:24,0:24:63.22:0,63,1027	0/0:8,0:8:24.08:0,24,391
chr10	41074558	.	GTACA	G	130.01	PASS	AB=0.731;AC=3;AF=0.054;AN=56;BaseQRankSum=4.829;DP=926;FS=5.646;HRun=0;HaplotypeScore=173.2581;InbreedingCoeff=0.1452;MQ=57.43;MQ0=14;MQRankSum=-4.648;QD=2.17;ReadPosRankSum=-0.230;VQSLOD=2.3704;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:58:99:0,162,4237	0/0:14,0:14:42.14:0,42,1129	0/0:68,0:32:83.09:0,83,1977	0/0:68,0:41:99:0,113,2653	0/0:16,1:17:0.68:0,1,256	0/0:30,0:30:84.27:0,84,2238	0/0:39,0:39:99:0,108,2952	0/0:32,0:32:96.33:0,96,2611	0/0:41,0:41:99:0,118,3181	0/0:29,0:29:81.28:0,81,2120	0/0:26,0:26:78.27:0,78,2093	0/0:37,1:37:99:0,108,3002	0/0:31,0:31:93.32:0,93,2502	0/1:17,6:22:0:1,0,0	0/0:34,0:34:99:0,102,2744	0/1:16,8:23:99:178,0,223	0/1:6,7:13:40.27:40,0,177	0/0:24,1:25:15.09:0,15,1765	0/0:17,0:17:51.18:0,51,1374	0/0:34,0:34:99:0,102,2747	0/0:66,0:66:99:0,193,5010	0/0:31,0:31:93.32:0,93,2532	0/0:19,0:19:47.41:0,47,1341	0/0:57,0:57:99:0,162,4321	0/0:24,0:24:60.68:0,61,1642	0/0:31,0:31:93.32:0,93,2507	0/0:26,0:26:78.27:0,78,2061	0/0:8,0:8:24.08:0,24,629
chr10	41075108	.	TG	T	2805.50	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=13.284;DP=761;FS=1.300;HRun=6;HaplotypeScore=95.0596;InbreedingCoeff=0.9925;MQ=86.98;MQ0=0;MQRankSum=-5.192;QD=25.05;ReadPosRankSum=0.330;VQSLOD=3.1818;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,129,1696	0/0:12,0:12:33.09:0,33,419	0/0:22,0:22:54.59:0,55,666	0/0:31,0:31:60.63:0,61,707	0/0:22,0:22:37.82:0,38,334	0/0:26,0:26:66.21:0,66,856	0/0:29,0:29:84.23:0,84,1052	0/0:36,0:36:96.28:0,96,1211	0/0:25,0:25:75.23:0,75,971	1/1:3,24:27:72.15:756,72,0	1/1:2,16:18:48.12:516,48,0	0/0:37,0:37:99:0,108,1389	0/0:27,0:27:78.25:0,78,1026	0/0:28,0:28:75.70:0,76,494	1/1:2,36:38:96.24:1032,96,0	0/0:29,0:29:77.62:0,78,505	0/0:25,0:25:41.80:0,42,384	1/1:3,11:14:27.07:290,27,0	0/0:18,0:18:48.15:0,48,618	0/0:22,0:22:66.21:0,66,867	0/0:55,0:55:99:0,153,2009	0/0:29,0:29:78.24:0,78,1008	0/0:25,0:25:75.22:0,75,953	0/0:40,0:40:99:0,114,1480	1/1:2,13:15:36.09:387,36,0	0/0:37,1:38:70.08:0,70,1268	0/0:25,0:25:66.21:0,66,867	0/0:4,0:4:12.01:0,12,127
chr10	41076641	.	CT	C	9282.45	PASS	AB=0.965;AC=45;AF=0.804;AN=56;BaseQRankSum=7.117;DP=657;FS=3.765;HRun=11;HaplotypeScore=85.8288;InbreedingCoeff=0.7139;MQ=64.71;MQ0=1;MQRankSum=-0.494;QD=16.73;ReadPosRankSum=1.818;VQSLOD=5.8404;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:75.05:0,75,747	0/1:8,0:8:0.38:0,0,170	0/1:19,1:14:16.79:17,0,190	0/1:15,1:10:12.80:13,0,56	1/1:3,30:33:86.76:697,87,0	1/1:2,26:29:73.90:591,74,0	1/1:2,12:15:32.91:265,33,0	1/1:6,21:27:59.87:486,60,0	0/0:24,1:25:41.21:0,41,544	1/1:4,26:30:73.74:631,74,0	1/1:2,23:25:59.87:486,60,0	1/1:3,17:20:41.53:339,42,0	0/0:20,0:20:54.04:0,54,553	1/1:3,16:19:41.95:345,42,0	1/1:3,22:25:53.93:443,54,0	1/1:8,19:27:44.85:358,45,0	1/1:8,22:31:51.30:392,51,0	1/1:3,17:20:38.23:308,38,0	1/1:3,21:24:56.86:457,57,0	1/1:2,30:32:80.86:660,81,0	1/1:2,4:6:5.99:49,6,0	0/0:21,1:22:26.43:0,26,474	1/1:4,24:28:65.88:537,66,0	1/1:4,14:19:38.62:306,39,0	1/1:4,26:30:68.83:555,69,0	1/1:3,28:31:80.90:665,81,0	1/1:4,21:25:50.89:412,51,0	1/1:1,14:15:32.95:270,33,0
chr10	41079945	.	C	CTGTGTG	5170.87	PASS	AB=0.810;AC=22;AF=0.407;AN=54;BaseQRankSum=-2.456;DP=551;FS=7.333;HRun=0;HaplotypeScore=132.2516;InbreedingCoeff=0.7774;MQ=59.99;MQ0=8;MQRankSum=-1.660;QD=19.08;ReadPosRankSum=-1.839;VQSLOD=3.8210;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:28:4.43:0,4,8	0/0:10,0:10:15.05:0,15,289	./.	0/0:21,0:11:2.97:0,3,20	1/1:13,0:23:19.92:274,20,0	0/0:8,0:22:24.08:0,24,371	0/0:6,0:13:15.05:0,15,209	1/1:30,0:30:33.91:613,34,0	0/0:1,0:10:18.06:0,18,252	0/0:31,0:32:24.07:0,24,433	0/0:21,0:21:21.07:0,21,432	0/0:4,0:13:4.43:0,4,8	0/0:7,0:16:24.08:0,24,335	1/1:5,0:10:12.04:154,12,0	0/0:9,0:9:15.05:0,15,309	1/1:5,0:14:32.26:394,32,0	1/1:18,0:49:40.56:578,41,0	0/1:26,0:26:30.80:31,0,695	1/1:8,9:19:33.11:692,33,0	1/1:9,12:22:6.02:195,6,0	0/1:7,8:18:0:0,0,1	0/0:14,0:14:24.08:0,24,459	0/0:5,0:12:0.12:0,0,0	0/0:5,0:15:12.75:0,13,80	0/0:25,0:25:24.08:0,24,480	1/1:12,9:22:38.16:755,38,0	1/1:14,10:26:36.12:1099,36,0	1/1:5,5:11:15.05:386,15,0
chr10	41083813	.	TA	T	6740.07	PASS	AB=0.944;AC=37;AF=0.685;AN=54;BaseQRankSum=13.422;DP=614;FS=1.958;HRun=10;HaplotypeScore=86.8340;InbreedingCoeff=0.9101;MQ=77.11;MQ0=0;MQRankSum=-3.328;QD=16.12;ReadPosRankSum=2.094;VQSLOD=5.3461;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,141,1525	0/0:11,0:11:30.08:0,30,332	0/0:14,0:14:1.07:0,1,200	0/1:16,1:17:1.45:1,0,166	1/1:2,0:26:40.73:120,41,0	0/0:23,0:23:54.15:0,54,597	0/0:19,0:19:51.14:0,51,564	1/1:6,19:25:56.88:476,57,0	0/0:23,0:23:57.12:0,57,613	1/1:2,18:20:38.69:445,39,0	1/1:5,10:15:26.99:234,27,0	1/1:3,22:25:62.97:547,63,0	0/0:28,0:28:66.16:0,66,721	1/1:2,0:26:42.77:126,43,0	1/1:1,17:18:44.99:391,45,0	1/1:1,0:20:34.63:102,35,0	1/1:3,0:17:22.40:66,22,0	1/1:1,13:14:38.98:339,39,0	1/1:7,16:23:17.79:379,18,0	1/1:2,19:21:50.98:443,51,0	1/1:3,22:25:59.99:521,60,0	0/0:24,0:24:66.15:0,66,713	1/1:3,15:18:42.75:387,43,0	1/1:4,28:33:71.01:605,71,0	1/1:3,23:26:65.98:573,66,0	1/1:1,16:17:44.97:388,45,0	1/1:6,26:31:68.97:599,69,0	./.
chr10	41085646	.	TTGTGTGTGTG	T	726.13	PASS	AB=0.902;AC=14;AF=0.269;AN=52;BaseQRankSum=3.879;DP=581;FS=5.381;HRun=0;HaplotypeScore=166.7797;InbreedingCoeff=0.2883;MQ=64.04;MQ0=7;MQRankSum=-2.698;QD=3.99;ReadPosRankSum=0.719;VQSLOD=1.8140;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:12.41:0,12,205	0/0:7,0:7:2.72:0,3,125	./.	./.	0/1:14,0:14:0.04:0,0,0	1/1:12,0:19:3.01:49,3,0	0/1:20,1:27:39.74:40,0,49	0/0:15,0:14:9.48:0,9,83	0/0:17,0:23:24.07:0,24,829	0/1:18,2:20:67.35:132,0,67	0/1:8,5:13:0:0,0,0	0/1:15,0:15:13.79:14,0,64	0/0:14,0:16:12.47:0,12,132	0/1:22,0:22:12.34:125,0,12	1/1:8,7:16:9.03:267,9,0	0/0:11,0:11:2.99:0,3,24	0/0:18,0:18:2.97:0,3,20	1/1:6,8:14:2.79:89,3,0	0/0:20,0:21:8.50:0,9,123	0/0:15,0:15:18.01:0,18,418	0/0:55,0:55:72.06:0,72,2214	0/0:12,0:19:5.69:0,6,115	0/0:20,0:20:5.95:0,6,43	0/0:25,0:24:5.92:0,6,39	1/1:17,3:20:9.01:151,9,0	0/0:23,0:23:28.31:0,28,737	0/0:11,0:10:6.02:0,6,192	0/0:11,0:8:14.39:0,14,222
chr10	41085684	.	GTGTGTGT	G	146.80	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=6.368;DP=522;FS=0.000;HRun=0;HaplotypeScore=135.7334;InbreedingCoeff=0.1091;MQ=49.97;MQ0=14;MQRankSum=-3.841;QD=1.24;ReadPosRankSum=4.213;VQSLOD=2.3900;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:28:34.84:0,35,598	0/0:8,0:8:12.04:0,12,243	0/0:11,0:2:6.02:0,6,75	0/0:21,0:1:3:0,3,27	0/0:12,2:14:20.77:0,21,166	0/0:23,0:22:23.56:0,24,273	0/1:29,0:29:32.84:33,0,302	0/0:15,0:14:40:0,40,537	0/0:21,0:20:42.12:0,42,1148	0/0:20,0:20:18.93:0,19,691	0/0:13,0:13:18.06:0,18,229	0/1:26,0:25:18.87:19,0,224	0/0:16,0:13:18.06:0,18,340	1/1:14,1:15:9.02:123,9,0	0/1:18,0:17:78.98:79,0,236	0/0:4,1:5:8.98:0,9,76	0/0:15,0:15:25.13:0,25,214	0/1:14,0:14:15.18:15,0,210	0/0:10,0:10:27.45:0,27,426	0/0:14,0:14:31.54:0,32,629	0/0:62,0:60:99:0,147,3465	0/0:23,0:22:21.07:0,21,299	0/0:15,0:15:5.72:0,6,37	0/0:25,0:25:5.49:0,5,29	0/1:16,0:16:1.87:2,0,310	0/0:22,0:22:66.21:0,66,1546	0/0:8,0:7:15.05:0,15,434	0/0:12,0:9:22.63:0,23,462
chr10	41085693	.	A	AGT	301.48	PASS	AB=0.835;AC=11;AF=0.196;AN=56;BaseQRankSum=2.285;DP=486;FS=5.811;HRun=0;HaplotypeScore=106.5207;InbreedingCoeff=0.5394;MQ=51.96;MQ0=10;MQRankSum=-0.713;QD=2.74;ReadPosRankSum=0.649;VQSLOD=1.5357;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:25:22.06:0,22,305	0/0:7,0:7:12:0,12,139	0/0:10,0:2:6.02:0,6,78	0/0:19,0:5:3.72:0,4,19	1/1:12,0:14:1.93:5,2,0	0/0:23,0:22:20.62:0,21,272	0/0:26,0:26:28.26:0,28,371	0/0:13,0:13:29.17:0,29,263	0/0:21,0:20:35.63:0,36,367	0/0:23,0:23:62.94:0,63,790	0/0:15,0:15:27.05:0,27,355	1/1:25,0:24:3.93:377,4,0	0/1:15,0:12:5.99:6,0,107	0/0:12,0:14:5.60:0,6,26	0/0:16,0:16:36.09:0,36,442	1/1:4,0:5:2.49:9,2,0	1/1:14,0:15:1.24:2,1,0	0/0:16,0:16:20.77:0,21,224	0/0:10,0:10:20.69:0,21,246	0/0:11,0:11:27.52:0,28,337	0/0:55,0:53:99:0,120,1446	0/0:20,0:19:24.03:0,24,281	0/1:12,1:13:0.08:0,0,0	0/1:6,17:23:0:0,0,0	0/0:13,0:13:27.08:0,27,333	0/0:20,0:20:47.85:0,48,502	0/0:8,0:7:15.04:0,15,182	0/0:8,0:6:15.05:0,15,196
chr10	41085883	.	ATCTCTCTCTCTCTC	A	4800.13	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=2.808;DP=613;FS=12.559;HRun=0;HaplotypeScore=205.7126;InbreedingCoeff=0.7889;MQ=66.56;MQ0=18;MQRankSum=-1.362;QD=39.35;ReadPosRankSum=-0.048;VQSLOD=2.9993;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:36:9.03:0,9,397	0/0:7,0:7:6.02:0,6,303	0/0:36,0:19:17.65:0,18,560	0/0:52,0:21:20.90:0,21,655	0/0:23,0:23:15.37:0,15,314	0/0:13,0:13:9.03:0,9,432	0/0:39,0:39:11.97:0,12,450	1/1:23,16:35:48:752,48,0	0/0:8,0:17:15.04:0,15,638	0/0:19,0:33:63.20:0,63,2545	0/0:9,0:18:10.34:0,10,456	0/0:24,0:22:26.65:0,27,1116	0/0:8,0:8:21.04:0,21,688	0/0:23,0:23:1.44:0,1,46	0/0:5,0:14:6.02:0,6,234	0/0:25,0:25:5.73:0,6,236	0/0:13,0:13:11.81:0,12,208	0/0:13,0:11:21.06:0,21,837	1/1:5,12:18:39.09:1095,39,0	1/1:8,11:19:20.95:538,21,0	0/0:11,9:18:0:0,0,0	0/0:13,0:20:20.10:0,20,836	0/0:16,0:17:27.53:0,28,1178	0/0:12,0:24:18:0,18,582	0/0:15,0:15:9.74:0,10,101	1/1:7,18:25:52.05:1699,52,0	1/1:8,5:12:8.87:358,9,0	1/1:4,3:6:9.03:358,9,0
chr10	41085891	.	C	CTG	330.97	PASS	AB=0.879;AC=8;AF=0.143;AN=56;BaseQRankSum=2.348;DP=588;FS=2.740;HRun=0;HaplotypeScore=132.7364;InbreedingCoeff=0.5739;MQ=59.33;MQ0=21;MQRankSum=-2.068;QD=3.31;ReadPosRankSum=3.117;VQSLOD=2.7245;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:16.54:0,17,132	0/0:4,0:4:9:0,9,96	0/0:35,0:17:29.20:0,29,274	0/0:47,0:16:38.34:0,38,345	1/1:18,7:25:23.94:222,24,0	1/1:11,0:11:5.12:24,5,0	0/0:39,0:39:7.43:0,7,90	0/0:35,0:30:64.94:0,65,507	0/0:20,0:20:23.65:0,24,237	0/0:32,0:30:54.79:0,55,482	0/0:19,0:19:30.37:0,30,241	0/0:26,0:23:38.67:0,39,295	0/0:11,0:11:23.91:0,24,180	1/1:19,4:23:11.53:89,12,0	0/0:15,0:15:14.70:0,15,122	0/1:17,8:25:8.83:57,0,9	0/1:16,0:16:24.97:81,0,25	0/0:13,0:9:20.62:0,21,137	0/0:18,0:18:46.80:0,47,356	0/0:17,0:16:32.44:0,32,215	0/0:16,0:14:8.99:0,9,75	0/0:20,0:20:2.26:0,2,129	0/0:15,0:15:16.65:0,17,121	0/0:24,0:24:25.63:0,26,212	0/0:14,0:14:11.20:0,11,99	0/0:21,0:21:52.91:0,53,347	0/0:10,0:9:17.66:0,18,115	0/0:6,0:5:14.78:0,15,100
chr10	41085894	.	T	TCTCTCG	1184.73	PASS	AB=1.000;AC=16;AF=0.286;AN=56;BaseQRankSum=2.405;DP=582;FS=2.196;HRun=0;HaplotypeScore=155.7930;InbreedingCoeff=-0.1513;MQ=57.15;MQ0=21;MQRankSum=-1.942;QD=4.00;ReadPosRankSum=6.209;VQSLOD=2.3290;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:31,0:31:34.73:35,0,59	0/0:4,0:4:6.01:0,6,94	0/0:33,0:15:7.87:0,8,186	0/0:47,0:17:18.40:0,18,203	0/0:25,0:25:4.92:0,5,110	1/1:1,10:12:8.39:186,8,0	1/1:5,32:42:9.80:245,10,0	0/0:31,0:26:35.77:0,36,256	0/1:21,0:21:67.89:68,0,212	0/1:30,0:28:99:212,0,252	0/1:20,0:20:9.97:10,0,142	0/1:24,0:21:99:114,0,198	0/1:11,0:11:68.86:69,0,161	0/0:24,0:24:3.47:0,3,28	0/1:15,0:15:17.87:18,0,106	0/0:27,0:27:3:0,3,25	0/1:16,0:16:16.43:16,0,88	0/1:13,0:9:75.15:120,0,75	0/0:17,0:17:38.82:0,39,436	0/0:15,0:14:29.85:0,30,299	0/0:16,0:14:5.94:0,6,43	0/1:18,0:18:62.47:62,0,113	0/1:17,0:17:62.35:158,0,62	0/1:26,0:26:31.07:31,0,154	0/0:14,0:14:10.59:0,11,95	0/0:20,0:20:51.89:0,52,613	0/0:8,0:8:11.99:0,12,147	0/0:5,0:4:9.03:0,9,121
chr10	41085921	.	C	CTG	1035.74	PASS	AB=0.637;AC=6;AF=0.107;AN=56;BaseQRankSum=3.491;DP=535;FS=0.000;HRun=0;HaplotypeScore=126.3915;InbreedingCoeff=0.5756;MQ=57.71;MQ0=7;MQRankSum=-1.734;QD=10.90;ReadPosRankSum=-2.735;VQSLOD=2.4489;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:33.01:0,33,367	0/0:4,0:4:9.03:0,9,111	0/0:23,0:18:36.17:0,36,422	0/0:22,0:20:20.82:0,21,397	1/1:11,18:28:13.19:444,13,0	0/0:16,0:16:17.71:0,18,185	0/0:26,0:26:12.03:0,12,148	0/0:34,0:31:69.21:0,69,853	0/0:23,0:23:53.93:0,54,607	0/0:22,0:22:24.46:0,24,446	0/0:15,0:15:30.48:0,30,351	0/0:24,0:22:35.41:0,35,416	0/0:9,0:9:24.08:0,24,296	1/1:5,17:22:20.71:336,21,0	0/0:20,0:20:41.67:0,42,468	0/1:9,20:29:10.10:349,0,10	0/1:8,7:15:40.01:40,0,65	0/0:14,0:9:12.03:0,12,140	0/0:23,0:23:51.13:0,51,606	0/0:18,0:18:36.10:0,36,425	0/0:13,0:13:12.04:0,12,143	0/0:15,0:15:24.06:0,24,277	0/0:16,0:16:17.92:0,18,222	0/0:21,0:21:42.11:0,42,495	0/0:14,0:14:17.53:0,18,220	0/0:25,0:25:56.90:0,57,672	0/0:6,0:6:12.04:0,12,146	0/0:5,0:5:12.03:0,12,135
chr10	41090411	.	A	ACT	22615.67	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=-13.908;DP=608;FS=0.726;HRun=0;HaplotypeScore=72.1772;InbreedingCoeff=0.9997;MQ=78.62;MQ0=1;MQRankSum=-4.314;QD=49.60;ReadPosRankSum=0.512;VQSLOD=5.6576;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,117,1723	0/0:9,0:9:27.09:0,27,398	0/0:16,0:16:39.11:0,39,494	0/0:14,0:14:36.12:0,36,503	1/1:3,23:26:54.19:1011,54,0	1/1:1,22:23:57.20:1068,57,0	1/1:0,18:18:39.13:731,39,0	1/1:1,28:29:87.30:1581,87,0	0/0:25,0:25:72.24:0,72,1060	1/1:2,18:20:57.15:1026,57,0	1/1:1,12:13:33.11:617,33,0	1/1:0,15:15:42.14:787,42,0	0/0:23,0:23:69.23:0,69,1011	1/1:1,15:16:42.14:786,42,0	1/1:0,18:18:54.19:1012,54,0	1/1:1,11:12:36.12:654,36,0	1/1:2,30:32:81.28:1512,81,0	1/1:0,26:25:66.23:1236,66,0	1/1:1,27:29:87.28:1594,87,0	1/1:1,21:22:60.21:1124,60,0	1/1:0,20:20:54.19:1011,54,0	0/0:25,0:25:75.25:0,75,1104	1/1:1,17:18:45.15:843,45,0	1/1:1,18:19:45.15:843,45,0	1/1:1,30:31:90.31:1686,90,0	1/1:1,26:28:81.27:1473,81,0	1/1:0,23:23:60.21:1123,60,0	1/1:0,18:18:48.16:899,48,0
chr10	41090482	.	AGCC	A	2765.63	PASS	AB=0.519;AC=7;AF=0.125;AN=56;BaseQRankSum=13.546;DP=581;FS=0.000;HRun=0;HaplotypeScore=115.6313;InbreedingCoeff=0.7754;MQ=69.75;MQ0=1;MQRankSum=-2.572;QD=35.92;ReadPosRankSum=3.483;VQSLOD=4.5457;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,126,3104	0/0:16,0:16:48.16:0,48,1179	0/0:6,0:5:4.28:0,4,234	0/0:11,0:11:6.59:0,7,230	1/1:0,23:23:66.08:933,66,0	0/0:24,0:24:72.25:0,72,1767	0/0:18,0:18:51.18:0,51,1253	0/0:31,0:31:90.31:0,90,2214	0/0:19,0:19:57.18:0,57,1353	0/0:22,0:22:66.23:0,66,1600	0/0:18,0:18:54.19:0,54,1310	0/0:19,0:19:57.20:0,57,1405	0/0:20,0:20:60.19:0,60,1398	1/1:0,16:16:41.71:649,42,0	0/0:20,0:20:60.21:0,60,1478	0/1:1,13:14:32.54:435,0,33	1/1:3,21:24:65.86:897,66,0	0/0:21,0:20:54.14:0,54,1277	0/0:27,0:27:81.28:0,81,1947	0/0:24,0:24:72.25:0,72,1767	0/0:18,0:18:51.18:0,51,1254	0/0:16,0:16:48.15:0,48,1127	0/0:24,0:24:72.25:0,72,1682	0/0:15,0:15:42.14:0,42,1009	0/0:17,0:17:51.16:0,51,1154	0/0:27,0:27:81.26:0,81,1929	0/0:31,0:31:87.30:0,87,2113	0/0:18,0:18:48.16:0,48,1182
chr10	41090487	.	A	ATTTG	5444.32	PASS	AB=0.793;AC=8;AF=0.143;AN=56;BaseQRankSum=12.828;DP=603;FS=0.434;HRun=0;HaplotypeScore=120.9448;InbreedingCoeff=0.7137;MQ=70.09;MQ0=1;MQRankSum=-2.651;QD=56.71;ReadPosRankSum=2.417;VQSLOD=6.4494;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,123,2539	0/0:16,0:16:48.16:0,48,994	0/0:9,0:8:17.93:0,18,217	0/1:10,0:10:18.75:19,0,158	1/1:3,22:26:78.25:1766,78,0	0/0:23,0:23:69.24:0,69,1432	0/0:22,0:22:63.20:0,63,1241	0/0:31,0:31:87.28:0,87,1709	0/0:18,0:18:54.19:0,54,1132	0/0:21,0:21:60.21:0,60,1258	0/0:17,0:17:51.18:0,51,1069	0/0:20,0:20:57.20:0,57,1195	0/0:18,0:18:54.17:0,54,1093	1/1:1,16:17:48.16:1153,48,0	0/0:21,0:21:63.22:0,63,1309	0/1:5,12:17:14.76:903,0,15	1/1:5,21:26:69.16:1604,69,0	0/0:22,0:21:57.15:0,57,1137	0/0:32,0:32:96.32:0,96,1928	0/0:27,0:27:75.26:0,75,1520	0/0:20,0:20:54.66:0,55,1133	0/0:17,0:17:51.16:0,51,1018	0/0:24,0:24:63.22:0,63,1319	0/0:15,0:15:42.13:0,42,841	0/0:16,0:16:48.16:0,48,972	0/0:28,0:28:81.27:0,81,1652	0/0:31,0:31:84.29:0,84,1761	0/0:18,0:18:48.16:0,48,1004
chr10	41091290	.	TG	T	2409.82	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=13.293;DP=667;FS=1.398;HRun=7;HaplotypeScore=73.9023;InbreedingCoeff=0.9996;MQ=86.99;MQ0=0;MQRankSum=-1.417;QD=23.17;ReadPosRankSum=3.337;VQSLOD=3.7689;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,108,1308	0/0:10,0:10:27.08:0,27,333	0/0:27,0:27:63.16:0,63,745	0/0:19,0:19:36.21:0,36,552	1/1:3,21:24:48.10:490,48,0	0/0:20,0:20:48.12:0,48,567	0/0:33,0:33:90.29:0,90,1132	0/0:22,0:22:51.15:0,51,618	0/0:23,0:23:66.21:0,66,830	0/0:21,0:21:45.14:0,45,553	0/0:19,0:19:48.14:0,48,585	0/0:25,0:25:69.22:0,69,868	0/0:18,0:18:51.14:0,51,616	1/1:1,23:24:69.16:704,69,0	0/0:23,0:23:63.18:0,63,769	1/1:6,24:30:69.15:704,69,0	1/1:1,25:26:66.15:673,66,0	0/0:19,0:19:54.16:0,54,665	0/0:18,0:18:47.85:0,48,603	0/0:20,0:20:57.16:0,57,691	0/0:48,0:48:99:0,138,1733	0/0:29,0:29:81.17:0,81,936	0/0:21,0:21:57.15:0,57,680	0/0:32,0:32:87.26:0,87,1066	0/0:15,0:15:42.11:0,42,504	0/0:23,0:23:66.21:0,66,824	0/0:27,0:27:72.23:0,72,906	0/0:12,0:12:36.10:0,36,438
chr10	41093245	.	GA	G	3740.96	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=11.621;DP=673;FS=14.343;HRun=8;HaplotypeScore=67.6967;InbreedingCoeff=0.9938;MQ=73.58;MQ0=0;MQRankSum=0.552;QD=23.24;ReadPosRankSum=3.188;VQSLOD=3.1362;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,114,1352	0/0:7,0:7:18.05:0,18,208	0/0:24,0:24:42.98:0,43,469	0/0:12,0:11:20.82:0,21,206	1/1:1,34:35:87.07:830,87,0	1/1:4,22:26:60.09:579,60,0	1/1:2,22:24:60.09:579,60,0	0/0:26,0:26:66.20:0,66,797	0/0:30,0:30:90.25:0,90,1065	0/0:23,0:23:63.19:0,63,760	0/0:24,0:24:66.19:0,66,786	0/0:23,0:23:63.17:0,63,739	0/0:18,0:18:48.15:0,48,580	1/1:4,23:27:72.09:688,72,0	0/0:22,0:22:57.07:0,57,667	1/1:3,19:22:14.72:427,15,0	1/1:3,24:27:66.10:637,66,0	0/0:14,0:14:42.11:0,42,495	0/0:19,0:19:26.30:0,26,541	0/0:40,0:40:99:0,102,1229	0/0:24,0:24:60.18:0,60,723	0/0:22,0:22:60.17:0,60,714	0/0:29,0:29:72.21:0,72,853	0/0:15,0:15:42.11:0,42,483	0/0:21,0:21:60.18:0,60,724	0/0:34,0:34:84.26:0,84,1014	0/0:30,0:30:81.20:0,81,939	0/0:15,0:15:45.13:0,45,532
chr10	41094052	.	C	CGTGT	1071.32	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=1.732;DP=729;FS=0.812;HRun=0;HaplotypeScore=165.4855;InbreedingCoeff=0.8805;MQ=64.79;MQ0=6;MQRankSum=-0.175;QD=11.40;ReadPosRankSum=-1.264;VQSLOD=3.2312;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:90.04:0,90,1458	0/0:15,0:15:39.13:0,39,657	0/0:40,0:23:51.08:0,51,730	0/0:35,0:17:38.30:0,38,532	1/1:8,13:22:6.49:142,6,0	0/0:16,0:16:27.08:0,27,428	0/0:17,0:17:26.78:0,27,420	0/0:35,0:35:72.23:0,72,1129	0/0:18,0:18:39.12:0,39,639	0/0:27,0:27:70.09:0,70,1017	0/0:20,0:20:28.22:0,28,415	0/0:16,0:17:48.09:0,48,740	0/0:19,0:19:47.72:0,48,724	1/1:11,0:24:5.50:97,5,0	0/0:19,0:19:39.79:0,40,519	1/1:12,12:28:2.88:397,3,0	1/1:11,7:18:30.01:571,30,0	0/0:27,0:27:26.41:0,26,289	0/0:22,0:22:48.11:0,48,709	0/0:34,0:34:66.19:0,66,1048	0/0:26,0:26:48.16:0,48,788	0/0:33,0:33:69.21:0,69,1121	0/0:26,0:26:25.30:0,25,965	0/0:34,0:34:75.18:0,75,1177	0/0:34,0:34:44.09:0,44,550	0/0:23,0:23:54.17:0,54,864	0/0:29,0:28:71.91:0,72,1154	0/0:25,0:24:39.12:0,39,624
chr10	41094064	.	AGT	A	4021.90	PASS	AB=0.775;AC=29;AF=0.518;AN=56;BaseQRankSum=9.879;DP=747;FS=0.388;HRun=0;HaplotypeScore=125.4036;InbreedingCoeff=0.4631;MQ=58.77;MQ0=10;MQRankSum=-5.679;QD=8.28;ReadPosRankSum=2.709;VQSLOD=3.3720;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:38,4:41:90.92:91,0,953	0/0:16,0:16:6.60:0,7,495	0/0:38,0:18:9.02:0,9,114	0/0:35,0:15:20.82:0,21,207	0/0:21,0:21:4.91:0,5,50	1/1:17,0:17:12.24:132,12,0	1/1:16,0:16:26.76:185,27,0	1/1:16,13:28:41.68:439,42,0	0/1:16,2:18:31.47:31,0,451	0/1:6,0:32:23.23:145,0,23	1/1:3,0:20:23.36:109,23,0	0/0:22,0:22:61.44:0,61,909	0/0:24,0:24:38.65:0,39,550	0/0:22,0:22:6.48:0,6,73	1/1:4,0:25:33.60:158,34,0	0/0:25,0:25:25.57:0,26,235	0/0:22,0:19:32.97:0,33,281	0/1:10,0:28:15.94:16,0,51	0/1:9,10:20:8.63:339,0,9	1/1:10,23:34:41.63:449,42,0	1/1:9,20:29:21.29:310,21,0	0/1:24,4:28:13.49:13,0,739	0/1:24,2:26:4.45:4,0,845	0/0:35,0:35:72.23:0,72,1081	1/1:7,0:39:7.30:104,7,0	1/1:8,15:26:56.27:550,56,0	1/1:7,25:33:53.88:614,54,0	1/1:4,17:21:29.92:332,30,0
chr10	41094087	.	GTA	G	1368.69	PASS	AB=0.997;AC=18;AF=0.321;AN=56;BaseQRankSum=9.273;DP=742;FS=3.268;HRun=0;HaplotypeScore=131.3822;InbreedingCoeff=0.1471;MQ=57.71;MQ0=12;MQRankSum=0.480;QD=3.92;ReadPosRankSum=4.287;VQSLOD=2.6897;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:40:29.53:0,30,1142	0/0:15,0:15:36.84:0,37,613	0/0:31,0:16:47.88:0,48,446	0/0:40,0:20:34.60:0,35,353	0/0:20,0:20:23.88:0,24,202	1/1:2,19:21:13.93:305,14,0	1/1:1,21:22:27.09:410,27,0	0/1:25,0:24:89.12:89,0,181	0/0:18,0:18:12.18:0,12,512	0/0:33,0:33:21.62:0,22,374	1/1:20,0:19:2.12:38,2,0	0/0:29,0:29:86.82:0,87,1275	0/0:22,0:22:39.23:0,39,740	0/1:19,0:19:4.22:4,0,141	0/1:24,0:24:29.14:29,0,39	0/0:29,0:28:56.52:0,57,504	0/0:26,0:23:41.79:0,42,542	0/1:28,0:28:25:25,0,110	0/1:16,0:16:59.73:60,0,94	0/1:35,0:35:99:105,0,161	0/1:27,0:27:65.04:65,0,76	0/0:30,0:30:44.45:0,44,997	0/0:30,0:30:56.86:0,57,1071	0/0:28,0:28:84.14:0,84,1322	0/1:36,0:36:35.45:35,0,109	0/1:23,0:22:40.41:115,0,40	0/1:33,1:33:95.67:141,0,96	1/1:19,0:19:22.17:124,22,0
chr10	41095866	.	TCACCACCACCAC	T	342.72	PASS	AB=1.000;AC=11;AF=0.239;AN=46;BaseQRankSum=2.610;DP=453;FS=7.375;HRun=0;HaplotypeScore=100.6477;InbreedingCoeff=0.4062;MQ=43.20;MQ0=68;MQRankSum=-1.857;QD=2.47;ReadPosRankSum=0.919;VQSLOD=1.4493;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:12:5.87:0,6,35	./.	./.	./.	0/0:2,0:7:6.35:0,6,49	0/0:11,0:8:14.81:0,15,316	0/0:43,0:25:21.81:0,22,290	0/0:17,0:8:2.85:0,3,15	0/0:13,0:7:5.74:0,6,68	0/0:5,0:4:5.99:0,6,170	./.	1/1:15,7:14:9.03:187,9,0	0/0:8,0:5:6.02:0,6,244	0/0:14,0:12:19.68:0,20,180	0/0:6,0:5:9.03:0,9,252	0/0:9,0:7:10.20:0,10,84	0/0:16,0:25:11.69:0,12,77	0/0:11,0:10:8.99:0,9,126	0/1:14,0:8:50.87:51,0,51	0/0:6,0:8:2.79:0,3,13	1/1:73,0:47:2.88:101,3,0	0/0:4,0:3:3.01:0,3,36	1/1:2,4:6:2.94:18,3,0	0/0:23,10:25:3.01:0,3,40	0/0:4,0:3:3.01:0,3,67	1/1:9,0:16:4.33:74,4,0	./.	1/1:3,0:4:3.01:40,3,0
chr10	41096722	.	C	CT	972.46	PASS	AB=1.000;AC=27;AF=0.500;AN=54;BaseQRankSum=-1.409;DP=246;FS=6.487;HRun=13;HaplotypeScore=59.4054;InbreedingCoeff=0.6199;MQ=72.75;MQ0=3;MQRankSum=-1.220;QD=7.66;ReadPosRankSum=-0.934;VQSLOD=2.0147;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,8:9:12.47:108,12,0	0/0:4,0:4:11.90:0,12,82	0/0:15,0:6:2.82:0,3,14	0/0:16,0:10:3.38:0,3,37	0/0:4,0:6:4.47:0,4,13	1/1:6,0:7:9.40:42,9,0	1/1:5,0:6:1.08:7,1,0	1/1:22,3:26:7.66:181,8,0	1/1:1,5:6:12.01:111,12,0	0/0:9,1:10:8.89:0,9,62	./.	0/0:7,0:7:5.93:0,6,41	1/1:2,3:5:3:28,3,0	0/1:4,0:6:0.80:3,0,1	0/0:3,0:3:2.97:0,3,21	0/0:3,0:3:2.21:0,2,7	0/0:6,0:10:12.03:0,12,37	0/0:13,0:14:20.49:0,20,107	1/1:10,3:12:17.13:127,17,0	1/1:5,0:5:3:28,3,0	1/1:7,0:7:3:28,3,0	1/1:6,0:6:3:28,3,0	0/0:8,0:9:7.57:0,8,45	0/0:6,0:6:11.74:0,12,73	0/0:11,0:11:11.86:0,12,79	1/1:3,0:3:5.99:48,6,0	1/1:12,3:15:23.49:194,23,0	1/1:7,5:13:9.83:216,10,0
chr10	41096732	.	T	TTAA	316.10	PASS	AB=1.000;AC=9;AF=0.167;AN=54;BaseQRankSum=2.403;DP=205;FS=19.609;HRun=0;HaplotypeScore=66.7878;InbreedingCoeff=0.5297;MQ=56.91;MQ0=5;MQRankSum=-2.075;QD=9.58;ReadPosRankSum=2.081;VQSLOD=1.5398;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:8:16.18:0,16,128	0/0:4,0:4:12.04:0,12,193	0/0:21,0:3:6.36:0,6,54	0/0:16,0:7:14.80:0,15,162	0/1:7,0:7:11.83:12,0,22	1/1:3,4:7:17.81:250,18,0	1/1:5,0:5:9.02:109,9,0	0/0:17,0:17:47.88:0,48,482	0/0:5,0:5:11.91:0,12,85	0/0:7,0:7:12.03:0,12,171	./.	0/0:2,0:2:6.02:0,6,96	0/0:4,0:4:5.76:0,6,45	1/1:2,0:2:5.50:39,6,0	0/0:3,0:3:3.48:0,3,48	0/0:1,0:1:2.60:0,3,10	1/1:12,0:10:2.20:44,2,0	0/0:14,0:14:10.52:0,11,293	0/0:8,0:7:20.85:0,21,182	0/0:2,0:2:5.99:0,6,60	0/0:4,0:4:8.97:0,9,82	0/0:2,0:2:5.99:0,6,62	0/0:7,0:7:15.42:0,15,161	0/0:6,0:6:15.19:0,15,201	0/0:10,0:10:12.50:0,12,152	0/0:2,0:2:5.99:0,6,47	0/0:14,0:14:38.75:0,39,355	0/0:15,0:15:37.85:0,38,274
chr10	41096736	.	AAAT	A	643.55	PASS	AB=0.908;AC=18;AF=0.333;AN=54;BaseQRankSum=3.083;DP=182;FS=26.511;HRun=0;HaplotypeScore=56.4747;InbreedingCoeff=0.2619;MQ=57.16;MQ0=6;MQRankSum=-1.661;QD=6.92;ReadPosRankSum=0.849;VQSLOD=0.5866;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:8:15:0,15,307	0/0:4,0:4:12.04:0,12,295	0/0:22,0:3:6.02:0,6,116	0/1:17,0:7:15.12:15,0,192	1/1:5,1:6:12.50:166,12,0	1/1:3,1:6:7.04:142,7,0	1/1:4,0:4:5.37:36,5,0	0/0:13,0:13:35.93:0,36,434	0/0:5,0:5:12.04:0,12,246	0/0:5,0:5:11.40:0,11,150	./.	0/0:2,0:2:6.02:0,6,96	0/0:2,0:2:3.01:0,3,71	1/1:2,0:2:5.81:34,6,0	0/1:1,1:2:34.51:49,0,35	1/1:1,0:1:3.01:54,3,0	1/1:7,3:8:16.51:142,17,0	0/1:13,1:14:96.09:96,0,305	0/0:7,0:6:11.11:0,11,105	0/0:2,0:2:6.02:0,6,85	0/0:2,0:2:3.01:0,3,37	0/0:1,0:1:3.01:0,3,37	0/0:6,0:6:12.03:0,12,141	0/1:6,0:6:19.10:19,0,142	0/1:9,1:10:40.03:40,0,141	0/0:1,0:1:1.25:0,1,3	0/0:9,0:9:26.67:0,27,332	0/1:14,1:15:15.24:15,0,195
chr10	41096737	.	AAT	A	589.02	PASS	AB=1.000;AC=19;AF=0.365;AN=52;BaseQRankSum=2.535;DP=177;FS=25.134;HRun=0;HaplotypeScore=55.9179;InbreedingCoeff=0.2230;MQ=57.23;MQ0=6;MQRankSum=-2.573;QD=6.69;ReadPosRankSum=0.591;VQSLOD=1.1664;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:8:15.05:0,15,265	0/0:4,0:4:12.04:0,12,243	0/0:22,0:3:5.98:0,6,78	0/1:17,0:7:13.90:14,0,153	1/1:3,2:5:15.02:183,15,0	1/1:5,1:6:17.48:146,17,0	1/1:2,1:3:5.98:61,6,0	0/0:12,0:12:31.60:0,32,272	0/0:5,0:5:11.96:0,12,191	0/1:5,0:5:0.93:1,0,79	./.	0/0:2,0:2:6.01:0,6,59	0/0:2,0:2:3.01:0,3,58	1/1:1,0:2:5.60:28,6,0	0/1:2,0:2:21:31,0,21	1/1:1,0:1:3:29,3,0	1/1:4,1:8:15.37:110,15,0	0/1:13,0:14:84.30:84,0,158	0/1:7,0:6:18.39:18,0,52	0/0:2,0:2:5.98:0,6,55	0/0:1,0:1:2.99:0,3,24	0/0:1,0:1:2.98:0,3,21	0/0:6,0:6:5.26:0,5,73	0/1:6,0:6:24.90:25,0,67	0/1:10,0:10:22.20:22,0,89	./.	0/0:9,0:9:26.95:0,27,251	0/0:15,0:15:4.67:0,5,255
chr10	41096739	.	T	TTTATTTTATTTA	7302.26	PASS	AC=36;AF=0.720;AN=50;BaseQRankSum=-0.883;DP=172;FS=2.404;HRun=0;HaplotypeScore=65.7020;InbreedingCoeff=0.6636;MQ=45.94;MQ0=6;MQRankSum=-2.977;QD=62.95;ReadPosRankSum=0.947;VQSLOD=4.3092;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:8:15.05:0,15,365	0/0:4,0:4:12.04:0,12,318	0/0:22,0:3:6.02:0,6,94	0/0:14,0:5:8.28:0,8,101	1/1:5,0:5:15:164,15,0	1/1:4,0:6:18.04:537,18,0	1/1:2,0:2:6:61,6,0	1/1:13,0:13:27.90:433,28,0	0/0:5,0:5:11.75:0,12,218	1/1:5,0:5:9.03:139,9,0	./.	1/1:1,0:1:3.01:38,3,0	0/0:1,0:1:3.01:0,3,47	1/1:0,0:1:3.01:169,3,0	1/1:2,0:2:6.02:144,6,0	1/1:1,0:1:3.01:54,3,0	1/1:13,0:11:15.02:303,15,0	1/1:14,0:15:38.72:959,39,0	1/1:6,1:6:18.04:527,18,0	1/1:1,0:1:3.01:37,3,0	0/0:1,0:1:0:0,0,0	./.	1/1:2,1:6:5.96:222,6,0	1/1:4,1:5:9.03:167,9,0	1/1:3,5:10:12.04:517,12,0	./.	1/1:7,2:9:24.08:644,24,0	1/1:2,12:14:39.13:2188,39,0
chr10	41096782	.	T	TTA	882.46	PASS	AB=0.858;AC=13;AF=0.342;AN=38;BaseQRankSum=-1.342;DP=127;FS=5.740;HRun=0;HaplotypeScore=55.5266;InbreedingCoeff=0.2876;MQ=54.18;MQ0=3;MQRankSum=-0.233;QD=12.61;ReadPosRankSum=0.284;VQSLOD=2.6643;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:4:9.03:0,9,134	0/0:1,0:1:3.01:0,3,45	0/0:12,0:6:11.85:0,12,179	0/0:9,0:2:0.42:0,0,5	1/1:0,1:1:3.01:58,3,0	0/0:5,0:5:15.05:0,15,214	./.	0/1:18,0:24:99:164,0,494	./.	1/1:0,0:1:2.97:20,3,0	./.	./.	./.	./.	0/0:1,0:1:0.89:0,1,2	1/1:0,1:1:3.01:58,3,0	1/1:4,17:20:39.04:642,39,0	0/1:15,0:16:9.18:9,0,81	0/1:4,0:5:21.38:21,0,122	./.	1/1:0,0:1:3.01:35,3,0	./.	0/0:2,0:2:3.01:0,3,45	0/0:3,0:4:8.83:0,9,132	0/0:3,0:3:2.66:0,3,6	./.	0/0:2,0:2:6.01:0,6,73	0/0:14,0:14:39.12:0,39,548
chr10	41097502	.	AACAC	A	439.13	PASS	AB=0.819;AC=10;AF=0.263;AN=38;BaseQRankSum=1.054;DP=278;FS=4.064;HRun=0;HaplotypeScore=54.0074;InbreedingCoeff=0.2853;MQ=56.91;MQ0=8;MQRankSum=1.321;QD=6.76;ReadPosRankSum=0.494;VQSLOD=1.5664;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	1/1:2,1:3:3.01:46,3,0	./.	./.	0/0:10,0:10:3.01:0,3,68	0/0:8,0:7:3.01:0,3,67	0/0:12,0:12:6.02:0,6,140	./.	./.	0/1:8,5:13:43.88:83,0,44	1/1:7,0:7:6.01:68,6,0	0/1:10,0:10:15.89:16,0,141	./.	./.	0/0:6,0:9:3.01:0,3,37	./.	0/0:10,0:13:3.01:0,3,52	1/1:16,5:21:21.06:302,21,0	0/0:7,0:7:3.01:0,3,60	0/0:6,0:6:9:0,9,118	0/0:16,0:18:5.84:0,6,72	./.	0/0:5,0:5:6.02:0,6,105	0/0:13,0:14:8.76:0,9,125	1/1:8,2:10:3.01:46,3,0	0/0:9,0:7:9.02:0,9,135	0/0:2,0:4:3.01:0,3,38	0/0:3,0:3:8.99:0,9,128
chr10	41097655	.	A	AT	5873.04	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=2.401;DP=439;FS=2.973;HRun=10;HaplotypeScore=74.1589;InbreedingCoeff=0.9293;MQ=76.46;MQ0=0;MQRankSum=-6.772;QD=17.02;ReadPosRankSum=0.240;VQSLOD=5.4458;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:16:36.08:251,36,0	1/1:1,11:12:30.05:320,30,0	0/0:16,0:15:13.57:0,14,222	0/0:15,0:15:23.62:0,24,173	1/1:14,0:14:13.42:95,13,0	1/1:13,0:13:23.88:186,24,0	1/1:13,0:13:27.08:180,27,0	1/1:16,0:15:38.67:223,39,0	1/1:12,0:12:23.78:172,24,0	1/1:5,20:24:57.09:577,57,0	1/1:3,16:19:12.68:415,13,0	0/0:21,0:21:33.58:0,34,418	1/1:10,0:9:11.76:74,12,0	1/1:10,0:10:18.16:117,18,0	1/1:17,0:17:32.54:223,33,0	1/1:10,0:10:18.24:123,18,0	1/1:18,0:18:29.66:205,30,0	1/1:1,24:25:66.09:680,66,0	1/1:11,0:10:23.49:150,23,0	1/1:15,0:15:34.36:235,34,0	1/1:1,0:1:2.92:17,3,0	1/1:10,0:10:26.68:187,27,0	0/0:15,0:15:41.91:0,42,340	0/0:27,0:27:71.88:0,72,587	1/1:3,30:34:59.40:808,59,0	1/1:16,0:15:32.75:217,33,0	1/1:20,0:20:43.02:304,43,0	1/1:7,0:7:17.68:116,18,0
chr10	41097657	.	T	TA	6153.04	PASS	AB=0.757;AC=36;AF=0.643;AN=56;BaseQRankSum=-4.819;DP=435;FS=0.852;HRun=0;HaplotypeScore=60.3602;InbreedingCoeff=0.2039;MQ=76.18;MQ0=0;MQRankSum=-4.640;QD=18.04;ReadPosRankSum=4.333;VQSLOD=7.0750;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,15:17:17.10:433,17,0	0/1:12,0:12:2.96:45,0,3	0/0:16,0:15:16.82:0,17,419	0/0:15,0:15:35.32:0,35,318	0/1:6,7:13:72.57:180,0,73	1/1:0,12:12:24.08:324,24,0	1/1:2,10:12:8.97:310,9,0	1/1:2,14:15:30.04:545,30,0	1/1:2,11:13:3.53:308,4,0	0/1:25,0:24:48.26:48,0,91	0/1:19,0:19:45.40:45,0,68	0/0:19,0:19:52.05:0,52,748	0/1:2,6:8:5.95:152,0,6	1/1:2,8:10:2.06:225,2,0	1/1:2,14:16:16.30:437,16,0	1/1:3,7:10:2.29:226,2,0	0/1:4,14:18:13.26:377,0,13	1/1:24,0:24:13.71:90,14,0	1/1:2,9:10:27.04:353,27,0	0/1:3,10:14:7.40:403,0,7	1/1:0,1:1:3.01:42,3,0	1/1:1,10:11:10.27:354,10,0	0/0:17,0:17:45.11:0,45,597	0/0:27,0:27:81.24:0,81,1079	0/1:34,0:34:21.88:131,0,22	0/1:5,10:14:3.63:378,0,4	1/1:3,16:19:9.93:529,10,0	0/1:4,6:10:0.74:216,0,1
chr10	41098387	.	TTTTTC	T	191.10	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.052;DP=374;FS=0.000;HRun=0;HaplotypeScore=67.6268;InbreedingCoeff=0.6727;MQ=71.79;MQ0=5;MQRankSum=-0.900;QD=14.70;ReadPosRankSum=-0.405;VQSLOD=2.6875;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:15:39.13:0,39,1098	0/0:10,0:10:21.07:0,21,601	0/0:8,0:7:9.03:0,9,183	0/0:18,0:11:14.21:0,14,92	0/0:15,0:15:39.05:0,39,983	0/0:11,0:11:24.08:0,24,651	0/0:4,0:4:3.01:0,3,86	0/0:16,0:15:18.06:0,18,499	0/0:10,0:10:27.09:0,27,767	0/0:17,0:17:33.11:0,33,859	0/0:13,0:13:30.10:0,30,859	0/0:12,0:12:27.09:0,27,734	0/0:8,0:8:15.05:0,15,384	0/0:6,0:6:15.05:0,15,425	1/1:4,9:13:15.05:279,15,0	0/0:6,0:6:12.02:0,12,274	0/0:33,0:33:57.19:0,57,1545	0/0:22,0:22:30.04:0,30,730	0/0:13,0:13:30.09:0,30,758	0/0:9,0:9:24.07:0,24,626	0/0:15,0:15:36.10:0,36,968	0/0:3,0:3:6.02:0,6,172	0/0:20,0:20:48.16:0,48,1317	0/0:20,0:20:45.14:0,45,1102	0/0:12,0:12:27.09:0,27,697	0/0:14,0:14:27.09:0,27,771	0/0:16,0:16:44.18:0,44,1174	0/0:14,0:14:30.10:0,30,859
chr10	41098576	.	C	CTT	1193.99	PASS	AB=0.828;AC=37;AF=0.712;AN=52;BaseQRankSum=0.737;DP=178;FS=2.881;HRun=13;HaplotypeScore=33.3605;InbreedingCoeff=0.1386;MQ=55.29;MQ0=32;MQRankSum=-2.501;QD=8.91;ReadPosRankSum=-0.687;VQSLOD=0.0408;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:14,0:17:13.97:14,0,261	1/1:3,0:3:2.50:9,2,0	0/0:16,0:5:6.05:0,6,56	0/0:17,0:6:4.48:0,4,39	0/1:1,0:2:6.02:23,0,6	1/1:1,0:4:8.98:78,9,0	0/1:2,0:3:6.10:12,0,6	1/1:5,2:4:9.01:104,9,0	0/1:6,0:8:47.33:47,0,71	1/1:2,1:1:3.01:41,3,0	1/1:0,0:1:2.50:9,2,0	1/1:2,0:2:5.04:34,5,0	0/0:3,0:3:9:0,9,78	1/1:2,0:2:6.01:64,6,0	1/1:2,2:4:6.96:84,7,0	1/1:0,2:4:12.03:135,12,0	1/1:3,2:6:14.91:153,15,0	1/1:5,1:2:5.61:50,6,0	0/1:18,0:4:0.54:52,0,1	1/1:1,0:3:6.01:57,6,0	0/1:4,4:7:10.53:118,0,11	0/0:2,0:5:5.37:0,5,68	./.	1/1:2,0:4:3.48:29,3,0	./.	0/1:3,0:6:14.42:25,0,14	1/1:1,4:5:12.51:164,13,0	1/1:1,1:2:3.01:41,3,0
chr10	41100956	.	CCACACA	C	1648.83	PASS	AB=0.884;AC=21;AF=0.404;AN=52;BaseQRankSum=3.566;DP=510;FS=6.146;HRun=0;HaplotypeScore=117.5064;InbreedingCoeff=0.5957;MQ=58.05;MQ0=10;MQRankSum=-3.019;QD=7.33;ReadPosRankSum=1.082;VQSLOD=1.7207;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:26:12.04:168,12,0	0/0:4,0:3:8.98:0,9,125	./.	./.	0/0:10,0:14:18.06:0,18,513	1/1:8,1:14:7.40:19,7,0	0/1:8,2:13:36.71:71,0,37	0/0:20,0:20:3.01:0,3,37	0/0:11,0:22:27.09:0,27,723	1/1:16,7:23:21.04:336,21,0	1/1:12,1:14:8.77:94,9,0	0/0:13,0:13:24.08:0,24,701	0/0:16,0:16:17.93:0,18,407	0/0:8,0:16:12.04:0,12,331	1/1:9,5:15:15.05:286,15,0	0/0:10,0:18:23.58:0,24,571	0/0:13,0:24:30.57:0,31,793	1/1:11,0:12:9.02:109,9,0	0/1:19,0:19:45.70:46,0,95	1/1:18,0:19:7.25:102,7,0	0/0:18,0:15:0:0,0,0	0/0:12,0:17:9.02:0,9,173	0/0:18,0:19:23.20:0,23,646	0/0:15,0:16:21.07:0,21,533	1/1:12,9:21:18.06:347,18,0	0/1:18,0:20:26.77:27,0,39	1/1:11,3:24:17.62:233,18,0	0/0:4,0:7:0.34:0,0,18
chr10	41105772	.	GTCTATCTA	G	77.70	PASS	AB=0.972;AC=5;AF=0.104;AN=48;BaseQRankSum=-0.264;DP=612;FS=10.956;HRun=0;HaplotypeScore=188.2660;InbreedingCoeff=0.1457;MQ=62.47;MQ0=16;MQRankSum=-0.205;QD=0.72;ReadPosRankSum=-0.010;VQSLOD=2.2166;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:37,0:35:2.79:39,3,0	0/0:8,0:8:0:0,0,0	./.	./.	0/0:26,0:26:18.04:0,18,330	0/1:26,0:25:17.38:17,0,44	./.	./.	0/0:22,0:22:15.05:0,15,420	0/0:31,0:30:29.70:0,30,714	0/0:25,0:23:9.03:0,9,215	0/0:12,0:12:9.01:0,9,120	0/0:19,0:19:15.04:0,15,297	0/0:15,0:15:6.02:0,6,100	0/0:22,0:21:6.02:0,6,191	0/0:13,0:13:12.02:0,12,173	0/0:22,0:21:11.99:0,12,103	0/1:20,0:20:32.02:116,0,32	0/0:22,0:22:3.01:0,3,81	0/0:18,5:22:0:0,0,0	0/0:16,0:14:8.92:0,9,173	0/0:15,0:15:6.02:0,6,229	0/0:17,0:16:6.02:0,6,168	0/0:20,0:20:8.99:0,9,177	0/0:22,0:21:3.90:0,4,75	0/0:35,0:36:12.02:0,12,143	0/0:33,0:33:6.01:0,6,70	0/1:23,0:24:4.96:5,0,120
chr10	41105904	.	AT	A	4822.56	PASS	AB=0.821;AC=35;AF=0.625;AN=56;BaseQRankSum=4.275;DP=454;FS=6.245;HRun=12;HaplotypeScore=59.9142;InbreedingCoeff=0.6064;MQ=80.62;MQ0=1;MQRankSum=1.336;QD=14.35;ReadPosRankSum=3.817;VQSLOD=5.4041;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:14,2:16:8.38:8,0,257	0/1:3,1:4:14.22:14,0,52	0/1:21,2:20:30.96:53,0,31	0/1:15,1:16:20.39:20,0,64	1/1:0,15:15:41.81:322,42,0	0/0:21,0:21:60.08:0,60,587	0/0:14,2:16:15.83:0,16,333	1/1:6,12:18:13.49:250,13,0	0/0:20,1:22:31.41:0,31,458	1/1:2,17:19:47.75:365,48,0	1/1:3,27:30:71.66:557,72,0	0/0:8,0:8:24.05:0,24,244	0/0:17,0:18:25.35:0,25,390	1/1:0,10:10:23.91:186,24,0	1/1:3,11:15:37.89:284,38,0	1/1:0,10:10:23.71:186,24,0	1/1:0,17:17:44.83:348,45,0	1/1:5,15:20:32.84:255,33,0	1/1:6,12:18:35.82:276,36,0	1/1:0,20:20:50.75:395,51,0	0/1:4,16:20:7.09:318,0,7	0/0:11,0:11:32.42:0,32,307	0/0:15,0:15:36.07:0,36,365	0/0:7,0:7:15.03:0,15,152	1/1:4,11:16:1.47:184,1,0	1/1:2,13:15:35.82:278,36,0	1/1:4,19:24:49.84:377,50,0	1/1:2,7:10:19.93:145,20,0
chr10	41106785	.	ATGTGCG	A	2065.82	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=6.909;DP=627;FS=10.680;HRun=0;HaplotypeScore=166.4546;InbreedingCoeff=0.9042;MQ=58.75;MQ0=5;MQRankSum=1.818;QD=5.55;ReadPosRankSum=2.726;VQSLOD=1.5261;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,117,2641	0/0:7,0:7:12.03:0,12,237	0/0:34,0:24:12.83:0,13,411	0/0:39,0:22:48.67:0,49,641	1/1:19,0:19:12.11:42,12,0	1/1:3,16:19:18.06:359,18,0	1/1:14,12:25:9.03:167,9,0	1/1:33,0:33:26.62:323,27,0	0/0:26,0:26:52.04:0,52,1300	0/0:20,0:20:41.94:0,42,595	0/0:19,0:19:18.05:0,18,326	1/1:16,0:15:17.47:61,17,0	0/0:14,0:14:27.04:0,27,659	1/1:20,0:20:19.84:69,20,0	0/0:13,0:13:24.04:0,24,595	1/1:10,0:10:4.99:17,5,0	1/1:28,0:28:31.23:111,31,0	0/0:11,0:11:20.88:0,21,359	1/1:19,0:19:23:147,23,0	1/1:19,0:19:22.18:77,22,0	1/1:59,0:58:4.27:198,4,0	0/0:7,0:7:11.88:0,12,292	1/1:16,0:16:12.48:44,12,0	1/1:40,1:41:60.40:265,60,0	0/0:15,0:15:14.98:0,15,293	1/1:24,0:24:7.41:142,7,0	1/1:15,1:16:34.24:239,34,0	1/1:7,0:7:7.49:26,7,0
chr10	41106798	.	TGTGC	T	8649.69	PASS	AB=0.906;AC=29;AF=0.518;AN=56;BaseQRankSum=2.697;DP=621;FS=12.453;HRun=0;HaplotypeScore=119.2703;InbreedingCoeff=0.7383;MQ=56.55;MQ0=10;MQRankSum=2.976;QD=23.57;ReadPosRankSum=5.737;VQSLOD=3.8620;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,140,2718	0/0:8,0:7:14.99:0,15,267	0/0:31,0:17:18.57:0,19,522	0/0:47,0:21:48.38:0,48,655	1/1:0,18:18:21.07:380,21,0	0/1:19,0:19:18.44:124,0,18	0/1:23,0:22:42.89:43,0,91	0/1:17,11:28:38.84:651,0,39	0/0:25,0:24:56.21:0,56,1254	0/0:16,0:16:41.11:0,41,513	0/0:16,0:16:18.01:0,18,250	1/1:2,14:15:24.08:434,24,0	0/0:10,0:10:30.04:0,30,618	1/1:2,16:18:24.08:454,24,0	0/0:17,0:16:24.04:0,24,409	1/1:1,7:8:6.02:114,6,0	1/1:1,26:27:42.12:763,42,0	0/0:12,0:12:20.38:0,20,258	1/1:4,13:17:37.30:548,37,0	1/1:1,19:20:30.10:554,30,0	1/1:7,64:70:35.35:1282,35,0	0/0:9,0:9:20.90:0,21,401	1/1:0,12:12:15.05:285,15,0	1/1:2,42:44:39.06:1300,39,0	0/0:11,0:11:14.98:0,15,216	1/1:3,22:25:49.76:942,50,0	1/1:3,13:16:5.87:607,6,0	1/1:0,5:5:9.03:171,9,0
chr10	41106800	.	TGC	T	3464.87	PASS	AB=0.982;AC=30;AF=0.536;AN=56;BaseQRankSum=9.515;DP=613;FS=14.616;HRun=0;HaplotypeScore=120.0999;InbreedingCoeff=0.5299;MQ=56.33;MQ0=11;MQRankSum=2.295;QD=8.95;ReadPosRankSum=4.860;VQSLOD=2.3756;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:96.25:0,96,2038	0/1:6,0:5:7.78:8,0,179	0/0:31,0:17:18.26:0,18,485	0/0:47,0:21:44.29:0,44,542	1/1:18,0:18:20.37:129,20,0	0/1:18,1:19:47.40:52,0,47	0/1:22,0:21:7.90:8,0,152	0/1:28,0:28:84.13:331,0,84	0/0:23,0:22:11.23:0,11,911	0/1:16,0:16:75.01:75,0,206	0/0:17,0:17:17.99:0,18,189	1/1:16,0:15:21.72:150,22,0	0/0:10,0:10:30.05:0,30,479	1/1:17,1:18:23.81:170,24,0	0/0:16,0:15:23.73:0,24,198	1/1:7,0:7:5.95:42,6,0	1/1:27,0:27:41.63:293,42,0	0/0:12,0:12:20.35:0,20,155	1/1:16,0:15:38.37:263,38,0	1/1:19,0:20:29.45:197,29,0	1/1:73,0:72:2.16:476,2,0	0/0:9,0:9:20.88:0,21,324	1/1:12,0:12:14.88:106,15,0	1/1:44,0:44:20.54:447,21,0	0/0:10,0:10:15.43:0,15,125	1/1:23,1:24:61.23:437,61,0	0/1:15,1:16:12.43:217,0,12	1/1:5,0:5:8.93:63,9,0
chr10	41106802	.	C	CGTGT	1591.33	PASS	AB=1.000;AC=14;AF=0.250;AN=56;BaseQRankSum=-3.229;DP=625;FS=2.563;HRun=0;HaplotypeScore=147.6102;InbreedingCoeff=0.5316;MQ=57.04;MQ0=11;MQRankSum=0.191;QD=9.70;ReadPosRankSum=-4.652;VQSLOD=1.9093;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:52:82.30:0,82,1610	0/0:4,0:5:12.03:0,12,177	0/0:30,0:17:18.03:0,18,264	0/0:50,0:22:18.96:0,19,222	0/1:18,0:18:3.15:3,0,98	0/0:19,0:19:21.02:0,21,249	0/0:20,0:19:20.90:0,21,266	0/1:31,0:31:93.75:94,0,130	0/0:21,0:21:22.66:0,23,764	1/1:6,11:18:27.09:557,27,0	1/1:4,12:17:6.02:147,6,0	0/0:16,0:15:18.82:0,19,165	0/0:10,0:10:24.08:0,24,392	0/0:18,0:18:20.91:0,21,182	1/1:4,10:15:20.81:452,21,0	0/0:8,0:8:6:0,6,52	0/0:26,0:27:29.63:0,30,327	1/1:3,7:14:11.72:179,12,0	0/1:14,0:13:46.10:46,0,119	0/0:20,0:20:17.83:0,18,212	0/0:72,0:72:19.11:0,19,577	0/0:9,0:9:2.05:0,2,226	0/0:12,0:12:14.84:0,15,118	0/0:45,0:45:74.69:0,75,657	1/1:2,8:10:8.66:221,9,0	0/1:26,0:26:64.45:64,0,230	0/0:19,0:19:38.78:0,39,349	0/0:5,0:5:9:0,9,78
chr10	41106942	.	C	CT	1287.72	PASS	AB=0.963;AC=13;AF=0.232;AN=56;BaseQRankSum=-4.718;DP=456;FS=5.387;HRun=10;HaplotypeScore=47.7587;InbreedingCoeff=0.7200;MQ=70.37;MQ0=3;MQRankSum=1.125;QD=12.50;ReadPosRankSum=0.385;VQSLOD=2.8653;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:37:85.05:0,85,694	0/0:11,0:11:29.96:0,30,246	0/0:18,0:14:19.44:0,19,143	0/1:9,0:7:5.59:6,0,21	0/0:21,0:21:47.91:0,48,393	0/0:17,0:17:38.94:0,39,320	0/0:13,0:14:28.97:0,29,228	0/0:26,0:27:49.95:0,50,400	0/0:13,0:13:29.96:0,30,246	1/1:7,8:14:21.05:224,21,0	1/1:3,12:15:29.99:295,30,0	0/0:8,0:9:23.01:0,23,178	0/1:7,1:8:28.58:29,0,122	0/0:16,0:16:41.92:0,42,344	1/1:2,9:12:27.37:271,27,0	0/1:10,0:11:0.28:0,0,131	0/0:23,0:23:53.91:0,54,443	1/1:1,8:9:18.05:192,18,0	0/0:14,1:15:9.97:0,10,288	0/0:9,0:9:23.96:0,24,197	0/0:21,0:21:38.94:0,39,320	0/0:11,0:11:26.97:0,27,222	0/0:14,1:15:3.97:0,4,239	0/0:22,1:23:21.91:0,22,382	1/1:3,19:22:42.11:448,42,0	0/0:21,1:22:18.93:0,19,360	0/0:22,0:22:41.87:0,42,344	0/0:8,0:8:20.93:0,21,167
chr10	41107218	.	CTT	C	1866.42	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=5.470;DP=375;FS=7.986;HRun=10;HaplotypeScore=53.4621;InbreedingCoeff=0.8875;MQ=68.50;MQ0=0;MQRankSum=0.831;QD=23.63;ReadPosRankSum=2.679;VQSLOD=2.5144;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:40:99:0,107,1501	0/0:6,0:7:17.52:0,18,221	0/0:10,0:11:14.52:0,15,159	0/0:12,0:11:0.04:0,0,117	0/0:14,0:14:39:0,39,535	0/0:7,0:7:15.05:0,15,238	0/0:11,0:11:27.08:0,27,407	0/0:29,0:29:69.22:0,69,1074	0/0:8,0:8:21.07:0,21,332	1/1:2,7:9:21.05:234,21,0	1/1:1,18:19:41.97:468,42,0	0/0:1,0:9:24.04:0,24,238	0/0:10,0:11:32.60:0,33,484	0/0:12,0:12:30.10:0,30,457	1/1:5,13:18:36.09:401,36,0	0/0:10,0:10:21.07:0,21,333	0/0:18,0:18:42.14:0,42,667	1/1:3,11:14:33.08:368,33,0	0/0:14,0:14:39.11:0,39,569	0/0:10,0:10:30.03:0,30,426	0/0:9,0:10:23.57:0,24,342	0/0:4,0:4:6.02:0,6,87	0/0:3,0:11:29.99:0,30,299	0/0:0,0:8:12.02:0,12,115	1/1:0,19:19:51.13:568,51,0	0/0:14,0:14:42.10:0,42,572	0/0:21,1:23:23.21:0,23,716	0/0:3,0:3:9.03:0,9,143
chr10	41107308	.	G	GT	5400.81	PASS	AB=0.625;AC=50;AF=0.962;AN=52;BaseQRankSum=-4.046;DP=171;FS=1.711;HRun=2;HaplotypeScore=29.0313;InbreedingCoeff=-0.0793;MQ=40.03;MQ0=8;MQRankSum=0.757;QD=31.58;ReadPosRankSum=-1.601;VQSLOD=3.9233;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,10:12:27.06:388,27,0	1/1:1,4:5:15.04:197,15,0	./.	./.	1/1:0,14:14:42.03:555,42,0	1/1:0,3:3:9.03:129,9,0	1/1:3,4:7:18.03:209,18,0	1/1:2,4:5:12.01:150,12,0	1/1:1,6:6:18.02:235,18,0	1/1:2,5:5:15.04:199,15,0	1/1:3,2:4:6.02:85,6,0	0/1:2,2:3:12.95:37,0,13	1/1:1,4:5:10:169,10,0	1/1:1,3:3:9.03:129,9,0	1/1:1,3:4:9.03:129,9,0	1/1:2,2:4:9.03:127,9,0	1/1:2,6:7:15.05:215,15,0	1/1:0,5:4:15.05:216,15,0	1/1:3,4:6:12.04:173,12,0	1/1:1,6:7:21.07:299,21,0	1/1:3,3:5:6.85:126,7,0	1/1:1,2:2:6.02:86,6,0	1/1:1,3:4:9.03:129,9,0	1/1:2,4:6:12.04:172,12,0	1/1:3,10:13:39.13:556,39,0	1/1:2,4:5:0.12:158,0,0	1/1:3,8:10:17.65:336,18,0	0/1:2,5:7:6.18:195,0,6
chr10	41107328	.	TC	T	2604.72	PASS	AB=0.704;AC=44;AF=0.815;AN=54;BaseQRankSum=-2.665;DP=174;FS=3.020;HRun=6;HaplotypeScore=33.2544;InbreedingCoeff=0.1547;MQ=43.38;MQ0=19;MQRankSum=0.376;QD=15.98;ReadPosRankSum=-3.069;VQSLOD=2.0377;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,4:8:12.01:119,12,0	0/0:3,0:3:9.03:0,9,118	./.	0/1:4,1:3:0.71:1,0,15	1/1:5,4:7:9.02:96,9,0	1/1:3,2:5:6.01:64,6,0	1/1:0,3:2:6.02:64,6,0	1/1:3,6:7:15.04:161,15,0	1/1:1,6:6:15:148,15,0	1/1:4,5:6:18.05:192,18,0	1/1:2,4:5:15.04:160,15,0	0/0:3,1:2:3.01:0,3,39	0/1:2,4:6:27.44:85,0,27	1/1:2,1:2:6.02:64,6,0	1/1:2,3:3:9.02:97,9,0	1/1:0,3:3:9.02:97,9,0	1/1:1,10:10:18.05:193,18,0	1/1:3,1:3:3.01:32,3,0	1/1:2,5:4:12.03:129,12,0	1/1:3,4:4:8.98:84,9,0	0/1:2,4:5:27.39:85,0,27	1/1:0,6:4:12.03:128,12,0	1/1:1,2:3:9.02:93,9,0	1/1:3,3:6:12.03:126,12,0	1/1:2,7:8:21.05:225,21,0	0/1:2,5:6:21.42:143,0,21	0/1:8,4:11:21.50:140,0,21	0/1:5,1:5:23.20:23,0,70
chr10	41116191	.	CATATATATATATATATATATATAT	C	840.03	PASS	AC=4;AF=0.133;AN=30;BaseQRankSum=1.978;DP=175;FS=1.475;HRun=0;HaplotypeScore=97.0757;InbreedingCoeff=0.3487;MQ=92.80;MQ0=4;MQRankSum=-1.782;QD=36.52;ReadPosRankSum=1.469;VQSLOD=1.7249;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:10:9.03:0,9,128	./.	./.	0/0:16,0:9:2.49:0,2,6	./.	./.	./.	0/0:18,0:18:21.06:0,21,854	1/1:10,2:12:8.95:135,9,0	0/0:9,0:8:3.01:0,3,69	./.	0/0:2,0:3:3.01:0,3,92	1/1:5,5:11:21.07:803,21,0	0/0:5,0:6:3.01:0,3,101	./.	0/0:7,0:7:3.01:0,3,145	0/0:4,0:6:2.98:0,3,69	0/0:4,0:6:6.02:0,6,278	0/0:4,0:5:3.01:0,3,113	./.	./.	./.	./.	./.	./.	0/0:5,0:5:3.01:0,3,148	0/0:2,0:3:3.01:0,3,114	0/0:4,0:3:3.01:0,3,54
chr10	41116253	.	GAGACACACACAC	G	849.25	PASS	AB=0.879;AC=23;AF=0.460;AN=50;BaseQRankSum=-3.641;DP=211;FS=8.431;HRun=0;HaplotypeScore=81.0912;InbreedingCoeff=0.4907;MQ=54.33;MQ0=13;MQRankSum=-1.089;QD=9.23;ReadPosRankSum=-0.777;VQSLOD=0.8248;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:20.75:0,21,1028	0/0:1,0:1:3.01:0,3,158	0/0:17,0:3:8.32:0,8,41	0/0:16,0:4:3.47:0,3,26	0/1:3,0:3:0.01:0,0,0	1/1:0,4:4:3.01:72,3,0	1/1:0,3:3:3.01:49,3,0	1/1:15,0:10:17.58:118,18,0	0/0:17,0:16:23.56:0,24,934	0/0:7,0:7:21.07:0,21,766	0/0:5,0:4:3.01:0,3,119	./.	0/0:20,0:20:24.01:0,24,778	1/1:1,2:3:3.01:73,3,0	0/0:7,0:7:18.06:0,18,561	1/1:2,0:2:3.01:87,3,0	1/1:7,0:7:3.48:61,3,0	0/1:12,0:12:4.86:5,0,1009	1/1:2,8:9:23.79:171,24,0	./.	1/1:3,10:11:2.93:25,3,0	0/0:2,0:2:3.01:0,3,119	./.	0/0:9,0:9:5.86:0,6,56	0/0:4,0:4:8.98:0,9,259	0/1:3,4:7:99:104,0,111	1/1:5,0:5:11.98:137,12,0	1/1:0,8:8:3.01:107,3,0
chr10	41116255	.	GACACACACACAGAC	G	572.52	PASS	AB=1.000;AC=20;AF=0.400;AN=50;BaseQRankSum=-2.484;DP=222;FS=19.239;HRun=0;HaplotypeScore=90.4339;InbreedingCoeff=0.3123;MQ=53.41;MQ0=15;MQRankSum=-1.501;QD=6.66;ReadPosRankSum=-1.592;VQSLOD=0.0514;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:20.89:0,21,1189	0/0:1,0:1:3.01:0,3,185	0/0:19,0:3:8.32:0,8,41	0/0:18,0:4:3.47:0,3,26	1/1:0,0:3:0.47:1,0,0	1/1:4,0:4:3:26,3,0	1/1:3,0:3:1.25:3,1,0	1/1:17,0:12:3.64:114,4,0	0/0:17,0:16:23.71:0,24,1009	0/0:7,0:7:21.07:0,21,919	0/0:5,0:4:3.01:0,3,95	./.	0/0:20,0:20:23.68:0,24,947	1/1:5,0:5:9.01:102,9,0	0/0:7,0:7:17.93:0,18,587	1/1:3,0:4:6.02:151,6,0	1/1:3,5:7:3.48:95,3,0	0/1:12,0:12:6.50:6,0,1224	0/1:10,0:9:15:87,0,15	./.	0/0:13,0:11:2.96:0,3,20	0/0:2,0:2:3.01:0,3,144	./.	0/0:9,0:9:6.01:0,6,83	0/0:4,0:4:8.98:0,9,308	0/1:7,0:7:33.66:34,0,174	0/1:5,0:5:9.62:39,0,10	1/1:8,0:8:3.01:61,3,0
chr10	41116261	.	CACACAG	C	414.51	PASS	AB=1.000;AC=14;AF=0.280;AN=50;BaseQRankSum=-2.362;DP=238;FS=2.037;HRun=0;HaplotypeScore=71.8256;InbreedingCoeff=0.1864;MQ=51.64;MQ0=16;MQRankSum=-0.777;QD=4.88;ReadPosRankSum=-0.567;VQSLOD=1.5912;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:21.07:0,21,616	0/0:2,0:2:5.91:0,6,98	0/0:20,0:3:8.32:0,8,41	0/0:25,0:4:3.47:0,3,26	0/0:3,0:3:0:0,0,0	0/1:5,0:5:4.14:4,0,53	0/0:3,0:3:2.80:0,3,13	0/1:21,0:14:97.72:98,0,138	0/0:17,0:16:24.08:0,24,373	0/0:7,0:7:21:0,21,333	0/0:5,0:4:3.01:0,3,46	./.	0/0:19,0:19:22.18:0,22,262	0/1:6,0:6:2.05:2,0,113	0/0:7,0:7:17.42:0,17,237	0/1:5,0:5:39.24:39,0,50	1/1:9,0:8:2.94:19,3,0	0/0:12,0:12:19.21:0,19,376	0/1:11,0:10:68.21:125,0,68	./.	0/0:13,0:11:2.87:0,3,25	0/0:2,0:2:3.01:0,3,43	./.	1/1:0,9:9:6:112,6,0	0/0:4,0:4:8.98:0,9,111	0/1:6,0:5:18.66:19,0,136	1/1:5,0:5:11.95:92,12,0	1/1:8,0:8:3.01:45,3,0
chr10	41116267	.	GAC	G	1088.58	PASS	AB=0.967;AC=23;AF=0.548;AN=42;BaseQRankSum=-1.939;DP=246;FS=5.284;HRun=0;HaplotypeScore=60.5109;InbreedingCoeff=0.4826;MQ=51.91;MQ0=17;MQRankSum=-0.407;QD=9.81;ReadPosRankSum=5.085;VQSLOD=2.6600;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:18.06:0,18,264	0/0:0,0:2:5.90:0,6,42	./.	./.	./.	0/0:5,0:5:2.99:0,3,23	0/0:3,0:3:3.01:0,3,34	0/0:24,0:17:14.96:0,15,161	1/1:5,13:17:21.05:240,21,0	1/1:3,4:7:12.03:137,12,0	1/1:3,2:4:3:34,3,0	./.	1/1:5,14:20:22.76:205,23,0	0/0:7,0:7:8.91:0,9,62	1/1:0,6:7:17.88:186,18,0	0/1:4,0:4:8.27:8,0,17	0/1:8,1:8:0:0,0,0	1/1:1,9:10:24.07:275,24,0	0/0:11,0:10:5.98:0,6,57	./.	0/0:13,0:11:2.88:0,3,44	1/1:0,3:3:3.01:34,3,0	./.	1/1:9,0:9:2.41:9,2,0	1/1:1,3:4:6.02:69,6,0	0/1:6,0:5:25.24:25,0,78	./.	1/1:8,0:8:2.80:13,3,0
chr10	41116505	.	T	TG	242.86	PASS	AB=1.000;AC=23;AF=0.958;AN=24;DP=70;FS=0.000;HRun=1;HaplotypeScore=52.4548;InbreedingCoeff=0.0749;MQ=29.16;MQ0=0;QD=5.78;VQSLOD=0.3417;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,1:2:2.97:20,3,0	./.	./.	./.	./.	1/1:5,1:6:8.39:39,8,0	./.	1/1:2,0:2:5.48:24,5,0	1/1:7,1:8:2.74:12,3,0	1/1:3,0:3:5.74:37,6,0	./.	./.	1/1:6,0:6:8.56:45,9,0	./.	./.	1/1:4,0:4:2.96:19,3,0	./.	./.	1/1:4,0:4:8.46:44,8,0	1/1:1,0:1:2.92:17,3,0	./.	1/1:1,0:1:2.74:12,3,0	./.	./.	1/1:2,0:2:5.92:43,6,0	./.	0/1:3,0:3:0:0,0,0	./.
chr10	41117733	.	G	GGT	118.67	PASS	AB=0.909;AC=8;AF=0.143;AN=56;BaseQRankSum=3.717;DP=454;FS=0.661;HRun=0;HaplotypeScore=82.9259;InbreedingCoeff=-0.2070;MQ=70.38;MQ0=17;MQRankSum=-2.992;QD=0.89;ReadPosRankSum=-1.265;VQSLOD=1.0962;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:17,0:16:22.99:23,0,100	0/0:6,0:6:16.98:0,17,131	0/0:44,0:15:33.68:0,34,286	0/0:39,0:15:2.72:0,3,202	0/1:9,12:22:41.57:67,0,42	0/1:17,0:16:0.28:0,0,173	0/0:10,0:9:13.52:0,14,158	0/0:31,0:30:6.61:0,7,310	0/0:19,0:19:41.08:0,41,313	0/0:12,0:13:29.50:0,29,239	0/1:10,0:12:15.64:16,0,18	0/0:7,0:7:6.40:0,6,77	0/0:10,0:10:25.18:0,25,214	0/0:12,0:12:11.12:0,11,170	0/0:10,0:11:29.73:0,30,246	0/0:4,0:14:1.20:0,1,35	0/1:13,0:21:24.89:25,0,137	0/0:20,0:20:26.16:0,26,212	0/0:15,0:14:14.18:0,14,158	0/1:10,0:11:37.48:37,0,44	0/0:5,0:5:11.71:0,12,80	0/0:12,0:12:0.37:0,0,108	0/1:10,0:12:38.89:53,0,39	0/0:7,0:8:17.98:0,18,165	0/0:6,0:6:4.05:0,4,37	0/1:21,0:21:22.81:23,0,123	0/0:19,0:19:42.70:0,43,350	0/0:14,0:14:10.30:0,10,171
chr10	41118679	.	A	AAG	655.46	PASS	AB=0.726;AC=7;AF=0.125;AN=56;BaseQRankSum=-1.468;DP=424;FS=1.573;HRun=0;HaplotypeScore=71.1799;InbreedingCoeff=0.4001;MQ=60.08;MQ0=10;MQRankSum=1.542;QD=7.99;ReadPosRankSum=0.938;VQSLOD=3.1384;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:16.56:0,17,243	0/0:8,0:8:20.70:0,21,170	0/0:14,0:8:13.98:0,14,138	0/0:25,0:16:41.89:0,42,390	0/0:11,0:11:29.93:0,30,240	0/0:12,0:16:35.81:0,36,278	0/0:11,0:14:23.96:0,24,197	0/0:25,0:23:60.59:0,61,485	0/0:10,0:12:26.94:0,27,219	0/1:3,13:16:9.13:298,0,9	0/1:12,0:12:2.98:146,0,3	0/0:11,0:16:32.79:0,33,258	0/0:5,0:6:11.98:0,12,98	0/0:8,0:8:23.64:0,24,182	0/1:1,0:8:0:0,0,0	0/0:7,0:10:26.97:0,27,225	0/0:21,0:25:56.75:0,57,444	0/1:2,1:12:7.22:87,0,7	0/0:14,0:14:30.16:0,30,231	0/0:13,0:13:32.89:0,33,261	0/0:36,0:34:71.71:0,72,578	0/0:15,0:15:41.91:0,42,338	0/0:11,0:12:17.97:0,18,147	0/0:18,0:26:26.90:0,27,214	1/1:17,0:16:27.42:207,27,0	0/1:17,0:16:46.72:47,0,243	0/0:13,0:13:29.80:0,30,249	0/0:2,0:2:5.79:0,6,37
chr10	41119016	.	AATGCGCAGGAGGGAGGAC	A	4332.45	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.926;DP=704;FS=2.514;HRun=0;HaplotypeScore=323.9944;InbreedingCoeff=0.9832;MQ=87.52;MQ0=0;MQRankSum=-8.384;QD=88.42;ReadPosRankSum=3.225;VQSLOD=4.2625;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,120,9677	0/0:11,0:11:33.11:0,33,2645	0/0:24,0:24:60.43:0,60,3000	0/0:28,0:28:61.06:0,61,4274	0/0:28,0:28:81.26:0,81,6479	0/0:18,0:18:54.16:0,54,4105	0/0:26,0:26:78.27:0,78,6262	0/0:27,0:27:75.26:0,75,5175	0/0:17,0:17:51.17:0,51,3957	0/0:32,0:32:90.31:0,90,6930	0/0:25,0:25:72.25:0,72,5779	1/1:3,11:14:33.11:1702,33,0	0/0:32,0:32:93.26:0,93,7409	0/0:21,0:21:63.22:0,63,5022	0/0:30,0:30:90.31:0,90,7737	0/0:23,0:23:69.22:0,69,4737	0/0:29,0:29:87.30:0,87,6739	0/0:22,0:22:63.22:0,63,4575	0/0:24,0:24:63.22:0,63,4416	0/0:25,0:25:72.25:0,72,5615	0/0:57,0:57:99:0,169,13818	0/0:36,0:36:99:0,108,8539	1/1:6,13:19:36.12:1857,36,0	1/1:4,12:16:15.05:774,15,0	0/0:25,0:25:75.26:0,75,5730	0/0:25,0:25:65.58:0,66,4661	0/0:23,0:23:60.21:0,60,4885	0/0:4,0:4:12.04:0,12,866
chr10	41120876	.	G	GGA	1243.65	PASS	AB=0.905;AC=28;AF=0.636;AN=44;BaseQRankSum=-0.625;DP=414;FS=5.781;HRun=0;HaplotypeScore=75.4779;InbreedingCoeff=0.4251;MQ=71.77;MQ0=6;MQRankSum=2.134;QD=5.36;ReadPosRankSum=-1.579;VQSLOD=1.6816;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:14:11.97:129,12,0	./.	./.	./.	1/1:19,0:19:8.93:113,9,0	0/1:18,0:20:13.41:13,0,37	0/0:13,0:13:14.87:0,15,144	./.	1/1:10,0:10:12.01:128,12,0	1/1:14,0:14:8.53:103,9,0	1/1:24,0:24:14.57:137,15,0	0/0:4,0:8:8.52:0,9,42	1/1:7,1:8:3.01:44,3,0	1/1:10,5:15:5.95:62,6,0	1/1:5,3:8:9.03:133,9,0	1/1:11,0:11:9.02:100,9,0	1/1:16,0:16:20.99:191,21,0	0/1:10,1:15:27.96:115,0,28	./.	0/0:17,0:16:6:0,6,55	1/1:14,0:14:0.47:1,0,0	1/1:11,0:11:9:84,9,0	0/0:12,0:14:5.60:0,6,27	./.	0/1:11,5:17:25.78:38,0,26	0/0:18,0:18:13.70:0,14,134	0/0:20,0:26:35.08:0,35,316	0/1:14,0:14:10.31:10,0,62
chr10	41121146	.	CTT	C	3017.35	PASS	AB=0.653;AC=35;AF=0.625;AN=56;BaseQRankSum=-4.382;DP=333;FS=0.000;HRun=14;HaplotypeScore=84.0015;InbreedingCoeff=0.3726;MQ=69.17;MQ0=0;MQRankSum=-0.743;QD=11.47;ReadPosRankSum=1.481;VQSLOD=2.6750;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:6,5:17:97.35:97,0,103	1/1:1,1:2:3:28,3,0	0/1:7,2:8:37.42:37,0,126	0/1:8,1:9:23.18:23,0,26	1/1:3,11:14:30:278,30,0	1/1:2,7:12:14.60:170,15,0	1/1:4,2:6:5.59:82,6,0	1/1:3,7:10:14.90:139,15,0	0/0:2,0:9:17.98:0,18,94	0/1:2,2:14:29.77:30,0,141	0/0:3,0:18:40.43:0,40,155	0/0:2,0:4:4.99:0,5,17	0/0:1,0:7:9.98:0,10,35	1/1:0,5:6:17.76:151,18,0	0/1:3,3:10:12.60:89,0,13	1/1:2,6:8:17.99:167,18,0	1/1:2,7:11:14.58:170,15,0	0/1:4,2:11:36.53:37,0,58	1/1:3,6:11:17.63:194,18,0	1/1:6,19:25:47.94:444,48,0	1/1:13,10:24:8.77:316,9,0	0/0:1,0:6:7.49:0,7,26	0/0:5,0:15:23.13:0,23,112	0/0:4,0:8:4.99:0,5,17	0/1:1,2:15:4.80:5,0,47	1/1:1,8:10:23.97:222,24,0	1/1:1,18:23:19.85:317,20,0	1/1:0,9:10:17.89:213,18,0
chr10	41121572	.	CT	C	2956.54	PASS	AB=0.640;AC=14;AF=0.250;AN=56;BaseQRankSum=-4.010;DP=675;FS=25.842;HRun=11;HaplotypeScore=89.2832;InbreedingCoeff=0.2894;MQ=61.26;MQ0=3;MQRankSum=5.186;QD=11.07;ReadPosRankSum=3.635;VQSLOD=1.2344;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:54:99:0,113,602	0/0:5,0:5:12.03:0,12,128	0/0:16,0:15:16.99:0,17,147	0/0:10,0:9:12.50:0,13,127	1/1:4,14:18:37.97:301,38,0	0/0:20,0:24:62.32:0,62,545	0/0:28,0:25:57.96:0,58,538	0/1:20,21:42:67.99:405,0,68	0/0:27,1:30:52.43:0,52,748	0/0:23,0:34:62.37:0,62,389	0/0:3,0:15:35.55:0,36,194	0/0:27,0:26:70.24:0,70,661	0/0:17,2:18:5.83:0,6,319	0/1:8,6:13:26.63:142,0,27	0/0:31,0:40:81.52:0,82,498	0/1:9,13:20:59.77:263,0,60	0/1:11,15:28:16.96:323,0,17	0/0:13,0:27:48.28:0,48,250	0/1:8,12:19:8.67:215,0,9	1/1:1,11:12:23.92:197,24,0	0/1:8,13:21:1.13:232,0,1	0/0:11,0:11:27.01:0,27,269	0/0:14,0:12:33.04:0,33,339	0/0:31,0:31:75.12:0,75,772	0/0:3,0:17:36.93:0,37,185	0/1:19,18:36:98.91:359,0,99	0/1:13,26:38:46.94:513,0,47	1/1:1,9:11:23.01:178,23,0
chr10	41122550	.	A	AGTCGTCGTCGTC	1385.45	PASS	AB=0.944;AC=11;AF=0.196;AN=56;BaseQRankSum=-2.177;DP=885;FS=3.249;HRun=0;HaplotypeScore=309.0313;InbreedingCoeff=0.2027;MQ=75.71;MQ0=2;MQRankSum=1.267;QD=5.39;ReadPosRankSum=-3.728;VQSLOD=1.6202;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,105,2885	0/0:23,0:23:60.08:0,60,1418	0/0:45,0:41:92.25:0,92,1812	0/0:34,0:30:50.23:0,50,1132	0/0:11,0:11:13.29:0,13,308	0/0:15,0:15:24.08:0,24,565	0/0:54,0:54:54.99:0,55,1348	0/1:28,0:28:99:231,0,328	0/0:54,0:54:99:0,150,4281	0/0:36,0:36:78.12:0,78,2089	0/0:12,0:12:33.09:0,33,930	1/1:11,19:33:3.29:327,3,0	0/0:46,0:46:99:0,108,3276	0/0:35,0:34:48.16:0,48,1140	0/0:37,0:36:87.22:0,87,2552	0/0:36,0:36:45.15:0,45,1123	0/0:33,0:33:51.17:0,51,1257	0/0:24,0:24:60.10:0,60,1451	0/1:20,0:20:99:166,0,221	0/1:17,0:17:57.93:58,0,449	0/1:47,0:47:99:158,0,548	0/0:36,0:36:78.14:0,78,2049	0/1:8,10:22:0:0,0,0	1/1:19,22:44:8.17:420,8,0	0/0:33,0:33:96.29:0,96,3027	0/1:27,0:27:99:142,0,340	0/1:19,0:19:27.98:28,0,471	0/0:20,0:20:24.04:0,24,365
chr10	41122557	.	GTCA	G	8398.26	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=9.014;DP=840;FS=41.948;HRun=0;HaplotypeScore=141.2085;InbreedingCoeff=0.8911;MQ=71.84;MQ0=2;MQRankSum=-2.669;QD=21.48;ReadPosRankSum=1.930;VQSLOD=2.7504;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,120,2145	0/0:22,0:22:66.10:0,66,1101	0/0:46,0:41:99:0,103,1644	0/0:39,0:32:71.19:0,71,1126	1/1:1,11:12:12.04:204,12,0	1/1:0,18:18:24.08:406,24,0	1/1:2,49:51:57.19:961,57,0	1/1:3,26:29:74.56:793,75,0	0/0:53,0:53:99:0,159,2976	0/0:33,0:33:89.98:0,90,1556	0/0:12,0:12:36.08:0,36,652	0/1:28,0:28:26.89:27,0,63	0/0:39,0:39:99:0,111,2192	1/1:0,35:34:48.16:807,48,0	0/0:34,0:33:93.21:0,93,1706	1/1:1,30:31:45.15:760,45,0	1/1:1,30:31:51.17:864,51,0	0/0:25,0:25:67.63:0,68,1183	1/1:14,4:18:37.41:437,37,0	1/1:9,8:17:41.37:519,41,0	1/1:33,16:49:74.31:948,74,0	0/0:29,0:29:87.13:0,87,1419	1/1:17,0:17:2.52:42,3,0	0/0:41,0:41:9.59:0,10,87	0/0:35,0:35:99:0,102,2044	1/1:18,6:24:59.40:764,59,0	1/1:9,9:18:38.96:515,39,0	1/1:0,13:13:24.08:351,24,0
chr10	41122588	.	T	TCATCAC	4682.26	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=1.107;DP=871;FS=28.649;HRun=0;HaplotypeScore=216.4214;InbreedingCoeff=0.9949;MQ=61.77;MQ0=5;MQRankSum=-7.822;QD=27.07;ReadPosRankSum=-4.405;VQSLOD=2.5775;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:56:99:0,143,2742	0/0:14,0:14:33.11:0,33,701	0/0:43,0:36:77.29:0,77,1161	0/0:51,0:46:81.08:0,81,1480	0/0:12,0:12:24.08:0,24,422	0/0:21,0:21:42.11:0,42,746	0/0:49,0:49:78.09:0,78,1426	1/1:21,0:20:23.72:317,24,0	0/0:47,0:47:99:0,114,2193	0/0:38,0:38:81.27:0,81,1671	0/0:21,0:21:48.16:0,48,1000	0/0:32,0:32:23.74:0,24,1342	0/0:38,0:38:93.30:0,93,1807	0/0:32,0:31:63.17:0,63,1054	0/0:37,0:37:93.30:0,93,1799	0/0:27,0:27:54.15:0,54,956	0/0:30,0:30:57.16:0,57,1034	0/0:31,0:31:80.86:0,81,1570	1/1:9,7:16:28.87:657,29,0	1/1:9,12:21:27.09:532,27,0	1/1:21,24:51:21.98:431,22,0	0/0:29,0:29:78.25:0,78,1597	0/0:15,0:15:26.25:0,26,504	0/0:37,0:37:27.08:0,27,702	0/0:38,0:38:93.29:0,93,1897	1/1:6,16:24:16.20:1355,16,0	1/1:8,14:22:27.04:612,27,0	1/1:12,5:17:30.10:779,30,0
chr10	41122706	.	CGTT	C	963.81	PASS	AB=1.000;AC=28;AF=0.500;AN=56;BaseQRankSum=5.025;DP=764;FS=52.835;HRun=0;HaplotypeScore=207.2470;InbreedingCoeff=0.7552;MQ=48.99;MQ0=12;MQRankSum=-0.946;QD=2.97;ReadPosRankSum=-3.921;VQSLOD=-0.3247;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:84.51:0,85,1088	0/0:15,0:15:36.71:0,37,569	0/0:46,0:24:57.20:0,57,1038	0/0:41,0:19:47.91:0,48,678	1/1:10,0:8:11.68:81,12,0	1/1:15,0:15:21.02:106,21,0	1/1:35,0:35:21.29:148,21,0	1/1:16,0:15:22.38:151,22,0	0/0:48,0:48:99:0,119,1552	0/0:43,0:43:99:0,118,1574	0/0:29,0:29:59.99:0,60,777	1/1:15,2:17:11.01:75,11,0	0/0:31,0:31:85.26:0,85,970	1/1:26,0:22:3.70:24,4,0	0/0:38,0:38:73.83:0,74,859	0/1:25,0:24:9.83:10,0,15	1/1:12,0:12:5.64:22,6,0	0/0:39,0:39:90.24:0,90,1088	1/1:16,0:13:30.12:151,30,0	1/1:18,0:16:11.38:64,11,0	1/1:37,0:36:9.64:54,10,0	0/0:27,0:25:44.70:0,45,564	1/1:13,1:13:3.27:21,3,0	1/1:30,6:36:17.11:106,17,0	0/0:26,0:26:53.41:0,53,679	0/1:26,0:22:9.60:79,0,10	1/1:21,0:20:12.99:83,13,0	0/0:5,0:5:1.37:0,1,64
chr10	41122716	.	GTCATCATCATCA	G	3874.61	PASS	AB=0.902;AC=26;AF=0.520;AN=50;BaseQRankSum=2.626;DP=761;FS=0.740;HRun=0;HaplotypeScore=283.6496;InbreedingCoeff=0.3026;MQ=46.65;MQ0=16;MQRankSum=-4.289;QD=8.61;ReadPosRankSum=0.485;VQSLOD=1.8927;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:49:17.90:0,18,240	0/0:14,0:15:33.10:0,33,1357	./.	./.	./.	0/0:19,0:19:29.99:0,30,336	0/0:38,0:38:23.45:0,23,239	0/0:14,0:13:0:0,0,0	1/1:32,0:47:35.03:276,35,0	1/1:29,12:41:36.07:813,36,0	1/1:21,6:27:6.02:117,6,0	1/1:18,0:18:11.40:142,11,0	0/1:18,0:32:22.78:220,0,23	0/1:26,0:22:26.91:29,0,27	1/1:18,22:40:36.12:1017,36,0	1/1:23,0:22:3:26,3,0	1/1:14,0:14:4.13:92,4,0	1/1:23,9:32:11.07:375,11,0	0/0:19,0:14:0:0,0,0	0/0:17,0:15:0:0,0,0	0/0:33,0:32:0.31:0,0,1	0/1:15,0:23:2.50:79,0,2	0/0:12,0:24:0:0,0,0	0/1:37,0:37:8.75:9,0,57	1/1:17,15:32:11.86:378,12,0	1/1:16,0:21:8.26:147,8,0	0/1:25,0:24:49.55:128,0,50	0/1:6,0:6:28.44:28,0,233
chr10	41123249	.	TATCACCATC	T	4432.74	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=12.392;DP=885;FS=2.242;HRun=0;HaplotypeScore=238.3573;InbreedingCoeff=0.9999;MQ=66.11;MQ0=0;MQRankSum=-12.493;QD=46.66;ReadPosRankSum=-0.586;VQSLOD=4.5227;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:84.27:0,84,3675	0/0:16,0:16:39.13:0,39,1716	0/0:37,0:33:60.15:0,60,1798	0/0:31,0:28:51.15:0,51,1870	0/0:30,0:30:73.12:0,73,3035	0/0:44,0:44:99:0,99,4029	0/0:23,0:23:42.11:0,42,1640	0/0:23,0:23:45.14:0,45,1530	1/1:5,31:36:84.22:2154,84,0	0/0:31,0:31:69.23:0,69,2866	0/0:25,0:25:60.16:0,60,2449	0/0:37,0:37:81.26:0,81,3547	1/1:1,17:18:39.06:880,39,0	0/0:36,0:36:87.23:0,87,3568	0/0:40,0:40:99:0,111,4686	0/0:40,0:40:99:0,105,4272	0/0:23,0:23:63.19:0,63,2706	0/0:20,0:20:45.12:0,45,1866	0/0:30,0:30:66.18:0,66,2357	0/0:41,0:41:99:0,108,4757	0/0:44,0:44:99:0,102,4422	1/1:10,31:41:65.82:1399,66,0	0/0:23,0:23:57.18:0,57,2457	0/0:37,0:37:90.31:0,90,3966	0/0:23,0:23:54.19:0,54,2453	0/0:28,0:28:78.23:0,78,3192	0/0:37,0:37:99:0,99,4336	0/0:37,0:37:96.30:0,96,3728
chr10	41123671	.	TA	T	8630.40	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=14.558;DP=645;FS=4.600;HRun=8;HaplotypeScore=65.9752;InbreedingCoeff=0.9995;MQ=77.93;MQ0=0;MQRankSum=-3.452;QD=24.17;ReadPosRankSum=4.922;VQSLOD=5.5438;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,120,1449	0/0:13,0:13:39.12:0,39,470	0/0:24,0:23:39.08:0,39,460	0/0:24,1:25:47.72:0,48,560	1/1:5,20:25:54.06:521,54,0	1/1:3,17:20:45.07:435,45,0	1/1:0,17:17:45.07:434,45,0	1/1:4,17:21:48:448,48,0	0/0:28,0:28:81.23:0,81,962	0/0:32,0:32:84.25:0,84,998	0/0:25,0:25:69.19:0,69,820	1/1:1,9:10:27.04:261,27,0	0/0:24,0:24:69.21:0,69,832	1/1:0,22:22:63.10:608,63,0	0/0:15,0:15:39.12:0,39,471	1/1:2,16:18:41.81:405,42,0	1/1:5,23:28:64.66:613,65,0	0/0:9,0:9:23.53:0,24,273	1/1:2,22:24:66.08:627,66,0	1/1:2,37:39:99:1043,108,0	1/1:1,18:18:42.07:406,42,0	0/0:29,1:30:55.28:0,55,949	1/1:3,20:23:50.99:492,51,0	1/1:2,17:19:51.08:493,51,0	0/0:21,0:21:63.19:0,63,761	1/1:2,28:30:84.11:802,84,0	1/1:0,20:20:50.98:492,51,0	1/1:3,19:22:57.09:550,57,0
chr10	41124681	.	CT	C	1328.32	PASS	AB=0.704;AC=19;AF=0.452;AN=42;BaseQRankSum=1.569;DP=383;FS=0.000;HRun=1;HaplotypeScore=101.3341;InbreedingCoeff=0.3633;MQ=27.94;MQ0=113;MQRankSum=-1.386;QD=9.56;ReadPosRankSum=2.734;VQSLOD=1.3844;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	0/0:12,0:9:0:0,0,0	./.	./.	./.	0/1:1,8:9:12.11:62,0,12	./.	0/1:6,15:8:19.24:261,0,19	0/0:20,0:17:2.93:0,3,44	0/0:25,0:16:48.16:0,48,747	0/0:20,0:14:6.02:0,6,88	1/1:1,11:8:3.01:42,3,0	0/0:19,0:14:9.03:0,9,137	1/1:2,9:10:3.16:42,3,0	0/1:15,0:13:0.09:0,0,0	1/1:0,10:9:3.01:42,3,0	1/1:1,5:2:6.02:84,6,0	0/0:6,0:3:3.01:0,3,48	1/1:1,3:2:6.02:84,6,0	0/0:6,18:17:0.28:0,0,9	0/0:1,11:2:0:0,0,0	0/0:11,0:9:6.02:0,6,86	./.	./.	0/0:21,0:12:18.02:0,18,245	1/1:2,13:13:0.35:386,0,0	1/1:1,23:19:26.60:376,27,0	1/1:4,8:7:5.95:80,6,0
chr10	41124737	.	CA	C	2696.16	PASS	AB=0.729;AC=27;AF=0.482;AN=56;BaseQRankSum=2.955;DP=331;FS=19.720;HRun=1;HaplotypeScore=122.2571;InbreedingCoeff=0.4428;MQ=41.61;MQ0=14;MQRankSum=-5.765;QD=14.50;ReadPosRankSum=-0.185;VQSLOD=2.0207;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:14:27.09:0,27,430	0/0:14,0:13:23.93:0,24,383	0/0:8,0:4:9.03:0,9,144	0/0:6,0:2:2.62:0,3,48	1/1:1,12:11:5.69:83,6,0	1/1:2,11:13:14.85:209,15,0	1/1:0,6:6:9.03:126,9,0	1/1:3,30:27:81.26:1110,81,0	0/0:13,1:13:8.94:0,9,138	0/1:26,1:25:2.14:2,0,965	0/0:17,1:16:18.06:0,18,288	1/1:0,2:2:3.01:42,3,0	0/0:15,1:16:11.90:0,12,190	1/1:0,5:4:6.49:83,6,0	0/1:13,0:13:0.09:1,0,0	1/1:0,2:1:3.01:42,3,0	0/1:1,2:3:32.08:35,0,32	0/0:11,0:11:30.10:0,30,479	0/1:1,1:2:15.94:36,0,16	1/1:1,16:16:21.34:294,21,0	0/1:1,1:2:0:0,0,0	0/0:15,0:15:21.07:0,21,334	1/1:1,17:16:14.79:209,15,0	0/0:0,2:2:0:0,0,0	0/0:16,4:14:39.13:0,39,622	0/1:5,9:12:80.15:260,0,80	0/1:2,2:4:33.73:73,0,34	1/1:2,8:9:4.56:270,5,0
chr10	41124766	.	ATATC	A	2143.56	PASS	AB=1.000;AC=27;AF=0.643;AN=42;BaseQRankSum=0.910;DP=357;FS=12.906;HRun=0;HaplotypeScore=143.6035;InbreedingCoeff=0.4492;MQ=46.08;MQ0=16;MQRankSum=1.194;QD=9.74;ReadPosRankSum=-1.442;VQSLOD=2.2938;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:16,0:12:0.20:0,0,0	0/0:16,0:16:27.09:0,27,622	./.	./.	1/1:11,0:10:2.22:7,2,0	1/1:11,0:11:1.15:3,1,0	0/1:9,0:8:2.44:2,0,13	./.	1/1:5,12:15:21.03:294,21,0	1/1:15,12:26:45.15:695,45,0	1/1:10,8:16:14.61:199,15,0	0/0:3,0:3:0:0,0,0	1/1:14,1:15:5.81:60,6,0	1/1:6,0:4:0.89:2,1,0	1/1:10,10:20:23.74:323,24,0	./.	0/0:2,0:2:0:0,0,0	1/1:6,5:11:18.03:254,18,0	0/0:10,0:9:3.01:0,3,45	0/1:19,0:18:10.05:10,0,161	0/1:3,0:2:0:0,0,0	1/1:10,5:14:6:85,6,0	0/0:19,0:18:2.75:0,3,51	0/1:2,0:2:0:0,0,0	1/1:10,10:18:21.07:326,21,0	./.	./.	./.
chr10	41124792	.	A	ACAATT	804.93	PASS	AB=0.977;AC=12;AF=0.250;AN=48;BaseQRankSum=7.257;DP=240;FS=43.093;HRun=0;HaplotypeScore=92.0258;InbreedingCoeff=0.3672;MQ=37.85;MQ0=43;MQRankSum=-6.758;QD=17.13;ReadPosRankSum=-4.101;VQSLOD=0.3071;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:11:12.03:0,12,266	0/0:12,0:12:33.11:0,33,768	./.	./.	0/1:8,1:9:50.13:153,0,50	0/0:7,0:7:2.98:0,3,25	0/0:5,0:4:7.71:0,8,206	0/0:10,0:5:14.95:0,15,166	0/0:18,0:12:21.07:0,21,341	0/0:23,0:21:63.21:0,63,1132	0/0:14,0:12:15.03:0,15,254	0/0:2,0:2:0:0,0,0	0/0:10,0:8:8.99:0,9,138	1/1:2,1:1:3.01:57,3,0	0/0:16,0:14:24.08:0,24,402	0/0:2,0:1:3.01:0,3,70	0/1:1,0:1:0:0,0,0	0/0:11,0:9:24.08:0,24,401	1/1:5,0:1:3.01:53,3,0	1/1:6,3:9:21.94:392,22,0	./.	0/0:7,0:5:12.04:0,12,236	0/1:10,0:10:99:115,0,176	1/1:2,0:2:0.89:2,1,0	0/0:16,0:13:33.07:0,33,508	0/1:5,0:5:96.05:163,0,96	./.	0/0:5,0:3:0.47:0,0,1
chr10	41124794	.	CT	C	146.75	PASS	AB=1.000;AC=7;AF=0.146;AN=48;BaseQRankSum=-2.198;DP=247;FS=0.000;HRun=1;HaplotypeScore=97.6658;InbreedingCoeff=0.5480;MQ=33.53;MQ0=48;MQRankSum=-2.169;QD=6.38;ReadPosRankSum=-3.041;VQSLOD=-0.6609;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:12:12:0,12,157	0/0:12,0:12:33.11:0,33,523	./.	./.	0/0:13,0:12:21.24:0,21,142	0/0:7,0:7:1.73:0,2,5	0/0:5,0:4:9.03:0,9,139	1/1:9,4:5:13.29:171,13,0	0/0:18,0:12:15.19:0,15,56	0/0:23,0:21:32.68:0,33,319	0/0:14,0:12:12.16:0,12,50	0/0:2,0:2:0:0,0,0	0/0:12,0:8:5.68:0,6,40	0/0:2,0:1:2.22:0,2,7	0/0:16,0:14:19.51:0,20,77	0/0:2,0:1:3.01:0,3,46	0/0:1,0:1:0:0,0,0	0/0:11,0:9:12.24:0,12,90	0/0:3,0:2:2.70:0,3,8	0/0:8,2:14:19.92:0,20,57	./.	0/0:7,0:5:10.01:0,10,107	0/0:11,0:10:14.04:0,14,160	0/1:2,0:2:0:0,0,0	0/0:14,0:11:14.74:0,15,115	1/1:2,2:3:1.41:47,1,0	./.	1/1:0,4:3:2.94:37,3,0
chr10	41124834	.	A	ACTAT	1692.09	PASS	AC=16;AF=0.471;AN=34;BaseQRankSum=1.376;DP=179;FS=33.979;HRun=0;HaplotypeScore=60.5025;InbreedingCoeff=0.7288;MQ=26.46;MQ0=70;MQRankSum=-4.445;QD=43.39;ReadPosRankSum=1.693;VQSLOD=2.0077;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:4:3.01:0,3,52	0/0:11,0:7:21.07:0,21,365	./.	./.	1/1:0,5:5:12.04:304,12,0	1/1:0,2:2:6.02:152,6,0	1/1:1,4:3:6.02:152,6,0	1/1:6,3:4:9.03:228,9,0	0/0:18,0:10:12.04:0,12,209	0/0:16,0:10:21.04:0,21,311	0/0:13,0:7:9.03:0,9,156	1/1:0,2:2:6.02:134,6,0	0/0:15,0:4:3.01:0,3,52	./.	0/0:16,0:13:21.07:0,21,363	./.	./.	0/0:9,0:6:9.03:0,9,154	./.	1/1:3,10:12:27.08:640,27,0	./.	./.	1/1:0,1:1:3.01:76,3,0	./.	0/0:12,0:7:18.06:0,18,313	1/1:0,2:2:6.02:151,6,0	./.	./.
chr10	41124856	.	CTATG	C	353.29	PASS	AB=0.801;AC=16;AF=0.800;AN=20;BaseQRankSum=-0.496;DP=156;FS=0.000;HRun=0;HaplotypeScore=54.2443;InbreedingCoeff=0.1345;MQ=21.60;MQ0=83;MQRankSum=-1.736;QD=4.47;ReadPosRankSum=0.992;VQSLOD=0.9809;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:7,0:5:3:28,3,0	./.	./.	./.	./.	1/1:1,0:2:3:28,3,0	0/1:4,0:3:0:0,0,0	./.	1/1:8,6:5:3.01:47,3,0	./.	0/0:5,5:3:0:0,0,0	1/1:0,0:2:5.60:38,6,0	1/1:5,10:3:3.01:47,3,0	./.	1/1:8,4:9:9.03:141,9,0	./.	./.	1/1:6,3:5:6.02:94,6,0	./.	0/1:7,0:9:5.49:5,0,8	./.	./.	./.	./.	./.	./.	./.	./.
chr10	41125642	.	ATC	A	158.33	PASS	AC=6;AF=0.333;AN=18;BaseQRankSum=3.583;DP=123;FS=0.000;HRun=0;HaplotypeScore=50.1014;MQ=22.64;MQ0=50;MQRankSum=-3.583;QD=5.65;ReadPosRankSum=-0.028;VQSLOD=2.0710;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:5:6.02:0,6,86	./.	./.	./.	1/1:2,4:1:3.01:36,3,0	./.	./.	./.	./.	0/0:9,0:5:15.05:0,15,242	0/0:6,0:6:5.95:0,6,64	./.	./.	./.	./.	./.	./.	0/0:6,0:4:6.02:0,6,85	./.	1/1:9,8:8:10.45:179,10,0	./.	0/0:4,0:4:3.01:0,3,58	1/1:2,2:1:3.01:36,3,0	./.	0/0:5,0:5:15.05:0,15,221	./.	./.	./.
chr10	41125684	.	A	ACTAT	2000.01	PASS	AC=12;AF=0.462;AN=26;BaseQRankSum=2.890;DP=143;FS=6.138;HRun=0;HaplotypeScore=69.4989;InbreedingCoeff=0.6263;MQ=23.47;MQ0=47;MQRankSum=-2.916;QD=30.77;ReadPosRankSum=2.838;VQSLOD=3.1010;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:5:6.02:0,6,104	./.	./.	./.	1/1:3,13:12:14.92:330,15,0	1/1:0,2:1:3.01:62,3,0	./.	./.	./.	0/0:11,0:4:12.04:0,12,196	0/0:6,0:6:6.02:0,6,104	./.	./.	./.	0/0:3,0:1:3.01:0,3,52	./.	./.	0/0:5,0:2:3.01:0,3,52	./.	1/1:13,13:15:33.11:831,33,0	./.	0/0:6,0:5:6.02:0,6,104	1/1:2,9:10:27.09:668,27,0	./.	0/0:5,0:5:5.99:0,6,104	1/1:3,3:1:3.01:76,3,0	./.	1/1:0,4:2:6.02:152,6,0
chr10	41125706	.	CTATG	C	897.49	PASS	AB=0.734;AC=19;AF=0.792;AN=24;BaseQRankSum=0.595;DP=156;FS=0.000;HRun=0;HaplotypeScore=86.2103;InbreedingCoeff=0.0369;MQ=23.24;MQ0=58;MQRankSum=-1.464;QD=8.63;ReadPosRankSum=2.196;VQSLOD=2.3185;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:3:3:28,3,0	0/0:3,0:2:6.02:0,6,141	./.	./.	1/1:9,0:14:6.75:39,7,0	1/1:0,0:1:2.84:14,3,0	./.	./.	./.	0/1:6,8:8:49.86:260,0,50	1/1:2,8:9:9.03:141,9,0	./.	./.	./.	./.	./.	./.	./.	./.	1/1:8,0:11:15.01:136,15,0	./.	1/1:2,7:8:6.02:94,6,0	0/1:11,0:12:8.33:18,0,8	./.	1/1:0,8:8:12.51:188,13,0	0/1:4,0:3:8.26:22,0,8	./.	1/1:1,0:2:6.01:56,6,0
chr10	41125719	.	T	TACA	434.31	PASS	AB=0.889;AC=9;AF=0.375;AN=24;BaseQRankSum=4.083;DP=156;FS=0.000;HRun=0;HaplotypeScore=81.4503;InbreedingCoeff=0.4780;MQ=23.36;MQ0=57;MQRankSum=0.573;QD=8.69;ReadPosRankSum=1.720;VQSLOD=2.7300;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:2:3:0,3,27	0/0:3,0:2:6.02:0,6,106	./.	./.	1/1:14,1:13:7.73:144,8,0	1/1:2,0:1:3.01:69,3,0	./.	./.	./.	0/0:17,0:9:27.06:0,27,334	0/0:13,0:12:9.01:0,9,87	./.	./.	./.	./.	./.	./.	./.	./.	0/1:14,2:11:10.40:75,0,10	./.	0/0:9,0:8:6.01:0,6,58	1/1:10,2:11:5.85:136,6,0	./.	0/0:8,0:8:12.49:0,12,118	1/1:4,1:2:6.02:115,6,0	./.	0/0:2,0:2:0:0,0,1
chr10	41125725	.	T	TCA	625.39	PASS	AB=0.895;AC=9;AF=0.375;AN=24;BaseQRankSum=2.614;DP=156;FS=0.000;HRun=0;HaplotypeScore=85.7220;InbreedingCoeff=0.5243;MQ=23.87;MQ0=53;MQRankSum=-1.492;QD=12.26;ReadPosRankSum=-1.731;VQSLOD=3.1185;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:2:2.97:0,3,20	0/0:3,0:2:6.02:0,6,98	./.	./.	1/1:14,1:13:14.99:318,15,0	1/1:2,0:1:3.01:56,3,0	./.	./.	./.	0/0:19,0:12:35.98:0,36,403	0/0:13,0:12:8.97:0,9,69	./.	./.	./.	./.	./.	./.	./.	./.	0/1:15,2:12:18.38:43,0,18	./.	0/0:10,0:9:5.98:0,6,46	1/1:11,2:12:12.04:228,12,0	./.	0/0:8,0:8:12.43:0,12,93	1/1:3,1:2:6.02:93,6,0	./.	0/0:2,0:2:5.36:0,5,21
chr10	41125819	.	T	TATC	155.03	PASS	AB=0.916;AC=8;AF=0.333;AN=24;BaseQRankSum=1.833;DP=292;FS=0.000;HRun=0;HaplotypeScore=66.5038;InbreedingCoeff=0.0575;MQ=22.76;MQ0=87;MQRankSum=-1.367;QD=1.78;ReadPosRankSum=-1.567;VQSLOD=1.0383;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	0/0:17,3:14:0.43:0,0,1	0/0:17,0:9:0.47:0,0,1	./.	./.	0/1:9,0:4:0:0,0,0	0/0:19,0:13:36.11:0,36,516	./.	./.	./.	0/1:8,3:6:0.07:0,0,0	./.	0/1:11,1:6:30.74:31,0,40	./.	1/1:6,0:2:1.25:3,1,0	./.	0/0:20,7:21:6.01:0,6,76	./.	./.	0/1:16,0:11:0.15:0,0,0	./.	./.	0/1:13,3:4:33.69:145,0,34	0/1:16,1:10:54.02:54,0,82	0/0:3,3:4:0.47:0,0,1
chr10	41125862	.	CATCT	C	510.58	PASS	AB=0.793;AC=12;AF=0.462;AN=26;BaseQRankSum=1.290;DP=335;FS=9.688;HRun=0;HaplotypeScore=79.2920;InbreedingCoeff=0.5974;MQ=23.47;MQ0=108;MQRankSum=-1.766;QD=4.05;ReadPosRankSum=0.853;VQSLOD=0.9242;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	./.	1/1:11,8:10:6.01:102,6,0	0/0:5,5:2:0:0,0,0	./.	./.	0/0:14,0:9:27.09:0,27,640	./.	0/0:18,0:9:11.71:0,12,217	./.	0/1:5,12:11:0.02:0,0,0	./.	1/1:7,6:8:5.98:71,6,0	./.	0/0:9,0:2:2.50:0,2,9	./.	1/1:8,22:27:8.85:120,9,0	./.	./.	0/1:13,0:8:0.02:0,0,0	./.	0/0:12,0:11:9.03:0,9,186	1/1:12,7:6:14.94:220,15,0	1/1:9,6:10:5.95:102,6,0	0/0:8,3:4:0:0,0,0
chr10	41129624	.	G	GTT	178.12	PASS	AC=10;AF=1.00;AN=10;DP=15;FS=0.000;HRun=1;HaplotypeScore=7.9609;MQ=71.50;MQ0=0;QD=19.79;VQSLOD=1.0414;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,0:1:2.99:23,3,0	1/1:1,1:2:6.02:109,6,0	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	1/1:1,2:2:2.97:20,3,0	./.	./.	./.	./.	./.	./.	1/1:2,0:2:5.93:40,6,0	./.	./.	1/1:0,1:1:3.01:54,3,0	./.	./.	./.
chr10	41139184	.	G	GATATTA	23655.10	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=-8.678;DP=532;FS=6.259;HRun=0;HaplotypeScore=104.9649;InbreedingCoeff=0.9836;MQ=63.67;MQ0=1;MQRankSum=-15.184;QD=86.97;ReadPosRankSum=-2.043;VQSLOD=5.7655;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:38:99:0,111,2564	0/0:10,0:10:30.10:0,30,769	0/0:21,0:18:54.11:0,54,1038	0/0:11,0:11:30.10:0,30,696	1/1:5,23:31:78.26:2615,78,0	1/1:3,8:15:27.09:928,27,0	1/1:0,9:10:24.08:899,24,0	1/1:6,11:22:60.21:1840,60,0	0/0:20,0:20:60.15:0,60,1440	0/0:28,0:28:84.27:0,84,1988	0/0:22,0:21:66.17:0,66,1539	1/1:0,7:9:21.07:787,21,0	0/0:20,0:20:60.07:0,60,1330	1/1:1,11:13:36.12:1269,36,0	0/0:16,0:16:45.15:0,45,1153	1/1:3,9:12:33.11:1161,33,0	1/1:6,8:13:36.11:973,36,0	0/0:14,0:14:42.09:0,42,1018	1/1:5,5:11:33.11:1042,33,0	1/1:1,21:23:66.23:2252,66,0	1/1:0,3:3:6.02:224,6,0	0/0:33,0:33:99:0,99,2416	1/1:1,21:23:63.22:2207,63,0	1/1:5,6:11:21.07:579,21,0	0/0:26,0:26:78.27:0,78,1999	1/1:4,23:30:90.29:3070,90,0	1/1:3,27:35:75.26:2741,75,0	1/1:0,10:10:30.10:1066,30,0
chr10	41139388	.	AT	A	762.34	PASS	AB=0.892;AC=8;AF=0.143;AN=56;BaseQRankSum=4.408;DP=528;FS=1.836;HRun=12;HaplotypeScore=75.1158;InbreedingCoeff=0.6211;MQ=63.94;MQ0=1;MQRankSum=0.990;QD=9.18;ReadPosRankSum=1.930;VQSLOD=3.0581;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,3:40:26.28:0,26,780	0/0:9,1:10:0.65:0,1,174	0/1:14,1:14:5.71:6,0,166	0/0:10,0:10:11.97:0,12,116	0/0:17,0:17:36.03:0,36,355	1/1:3,6:9:17.91:139,18,0	1/1:4,16:20:41.83:325,42,0	0/0:16,2:20:4.36:0,4,362	0/0:23,0:23:50.99:0,51,480	0/0:28,0:28:63.08:0,63,624	0/0:15,0:15:35.56:0,36,341	0/0:19,0:19:45.04:0,45,440	0/0:9,0:9:21.03:0,21,203	0/0:15,0:15:39.04:0,39,385	0/0:19,0:19:36.06:0,36,356	0/1:9,2:11:19.42:19,0,186	0/0:20,1:22:27.70:0,28,448	0/0:17,0:17:42.08:0,42,426	0/0:12,1:13:9.83:0,10,281	0/0:18,0:19:38.87:0,39,369	0/0:29,1:30:52.04:0,52,685	0/0:24,0:25:50.92:0,51,491	0/0:21,0:22:47.92:0,48,464	1/1:6,22:27:40.14:422,40,0	0/0:19,0:20:47.92:0,48,465	0/0:23,0:24:53.90:0,54,522	0/0:19,0:19:47.93:0,48,471	0/0:8,0:8:9.02:0,9,91
chr10	41139594	.	TG	T	13611.94	PASS	AB=0.516;AC=31;AF=0.554;AN=56;BaseQRankSum=16.349;DP=631;FS=0.000;HRun=1;HaplotypeScore=112.0262;InbreedingCoeff=0.9526;MQ=84.72;MQ0=0;MQRankSum=-2.768;QD=39.11;ReadPosRankSum=0.776;VQSLOD=4.6018;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,163,2532	0/0:10,0:10:30.10:0,30,479	0/0:28,0:28:74.46:0,74,1102	0/0:17,0:17:45.12:0,45,677	1/1:0,28:28:60.20:837,60,0	1/1:0,21:21:57.19:797,57,0	1/1:0,16:16:48.16:671,48,0	1/1:0,21:21:63.20:860,63,0	0/0:28,0:28:84.26:0,84,1294	0/0:32,0:32:96.32:0,96,1515	0/0:21,0:21:54.18:0,54,862	1/1:0,17:17:51.17:713,51,0	0/0:17,0:17:51.17:0,51,809	1/1:0,16:16:48.16:671,48,0	0/0:19,0:19:57.19:0,57,908	1/1:0,13:13:39.13:545,39,0	0/1:1,15:16:2.73:542,0,3	0/0:18,0:18:54.18:0,54,863	1/1:0,23:23:66.19:903,66,0	1/1:0,20:20:57.19:796,57,0	1/1:0,40:40:99:1636,117,0	0/0:28,0:28:81.28:0,81,1293	1/1:0,24:24:66.22:922,66,0	1/1:0,25:25:69.23:965,69,0	0/0:11,0:11:30.10:0,30,479	1/1:1,31:32:48.33:1252,48,0	1/1:1,21:22:66.22:914,66,0	1/1:0,14:14:42.14:587,42,0
chr10	41139899	.	AGT	A	1521.80	PASS	AB=0.822;AC=45;AF=0.900;AN=50;BaseQRankSum=1.215;DP=417;FS=0.000;HRun=0;HaplotypeScore=72.0037;InbreedingCoeff=0.1001;MQ=56.73;MQ0=4;MQRankSum=0.431;QD=4.18;ReadPosRankSum=1.388;VQSLOD=2.0588;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:23,2:26:10.59:109,11,0	0/1:8,2:10:26.60:27,0,39	./.	./.	1/1:15,0:17:2.60:11,3,0	1/1:10,0:14:11.36:56,11,0	1/1:9,0:13:2.84:14,3,0	0/0:18,0:16:2.98:0,3,21	1/1:6,4:10:6.02:65,6,0	0/1:22,5:27:14.90:86,0,15	1/1:12,5:19:17.87:169,18,0	0/1:11,4:15:35.61:56,0,36	1/1:2,5:7:6.02:65,6,0	./.	1/1:6,0:12:14.20:70,14,0	1/1:8,0:12:5.06:21,5,0	1/1:12,1:20:5.82:35,6,0	1/1:12,0:15:11.36:56,11,0	1/1:16,1:17:8.75:63,9,0	1/1:14,0:18:0.47:1,0,0	1/1:3,0:5:2.84:14,3,0	1/1:5,4:9:14.87:145,15,0	1/1:11,4:15:9.01:89,9,0	1/1:5,8:14:20.78:210,21,0	1/1:6,0:16:17.04:84,17,0	1/1:19,1:24:19.90:111,20,0	1/1:15,0:21:8.52:42,9,0	1/1:1,0:4:8.36:39,8,0
chr10	41140043	.	TGGGAA	T	10281.58	PASS	AB=0.538;AC=31;AF=0.554;AN=56;BaseQRankSum=14.031;DP=434;FS=0.000;HRun=0;HaplotypeScore=112.6574;InbreedingCoeff=0.9198;MQ=84.41;MQ0=0;MQRankSum=-15.100;QD=46.95;ReadPosRankSum=1.952;VQSLOD=4.7659;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,126,3964	0/0:6,0:6:18.06:0,18,581	0/0:22,0:22:48.19:0,48,1710	0/0:24,0:24:66.16:0,66,1947	1/1:0,10:10:26.90:432,27,0	1/1:1,11:12:30.10:650,30,0	1/1:2,16:18:45.15:972,45,0	1/1:3,10:13:30.07:571,30,0	0/0:20,0:20:60.21:0,60,1872	0/0:25,0:25:69.24:0,69,2170	0/0:13,0:13:39.13:0,39,1259	1/1:3,11:14:30.03:600,30,0	0/0:12,0:12:33.10:0,33,996	1/1:1,12:14:33.04:667,33,0	0/0:16,0:16:48.16:0,48,1502	1/1:0,14:14:39.13:846,39,0	1/1:0,13:13:30.06:605,30,0	0/0:11,0:10:30.10:0,30,935	1/1:1,11:12:33.09:637,33,0	1/1:0,14:14:39:751,39,0	1/1:2,9:10:17.95:332,18,0	0/0:16,0:16:39.13:0,39,1209	1/1:1,15:15:39.10:801,39,0	1/1:4,10:14:14.88:274,15,0	0/0:7,0:7:21.07:0,21,674	0/1:3,18:21:42.82:974,0,43	1/1:0,18:18:39.13:843,39,0	1/1:0,5:5:15.05:325,15,0
chr10	41140839	.	GGT	G	482.43	PASS	AB=0.985;AC=10;AF=0.192;AN=52;BaseQRankSum=-1.659;DP=651;FS=3.095;HRun=0;HaplotypeScore=134.9265;InbreedingCoeff=0.4729;MQ=69.60;MQ0=8;MQRankSum=0.378;QD=3.11;ReadPosRankSum=2.050;VQSLOD=2.8110;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:35:8:0,8,88	0/0:8,0:8:9.01:0,9,114	./.	./.	0/1:15,0:33:2.54:3,0,74	0/0:18,0:17:0.47:0,0,1	0/0:26,0:26:10.26:0,10,84	0/0:26,0:26:2.97:0,3,20	0/0:19,0:19:8.95:0,9,75	0/0:27,0:33:20.04:0,20,198	0/0:18,0:18:9.01:0,9,108	1/1:13,10:24:17.88:179,18,0	0/0:12,0:20:3:0,3,26	0/0:15,0:22:12:0,12,107	0/0:13,0:21:5.99:0,6,50	0/0:10,0:19:12:0,12,105	0/0:20,0:23:30.09:0,30,232	0/0:17,0:17:21.80:0,22,166	0/0:22,0:22:2.15:0,2,48	1/1:11,0:16:0.47:1,0,0	0/0:29,0:29:3.47:0,3,42	0/1:21,0:21:11.51:12,0,163	1/1:16,15:31:11.70:132,12,0	1/1:8,20:30:29.75:292,30,0	0/0:19,0:28:11.99:0,12,101	0/0:22,0:21:17.82:0,18,146	0/0:25,0:24:9.27:0,9,64	0/0:9,0:8:8.11:0,8,44
chr10	41142328	.	T	TAC	454.12	PASS	AB=1.000;AC=12;AF=0.316;AN=38;BaseQRankSum=-1.533;DP=552;FS=4.373;HRun=0;HaplotypeScore=101.7192;InbreedingCoeff=0.4368;MQ=61.34;MQ0=15;MQRankSum=2.025;QD=3.20;ReadPosRankSum=2.398;VQSLOD=2.1467;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:38,0:34:20.98:197,21,0	./.	./.	./.	0/0:9,0:10:2.82:0,3,14	0/0:17,0:18:5.68:0,6,29	0/0:21,0:23:2.84:0,3,14	./.	0/0:21,0:21:5.59:0,6,27	1/1:21,0:21:12.49:145,12,0	0/1:11,0:11:0:0,0,0	0/0:17,0:18:2.26:0,2,40	0/0:4,0:5:2.84:0,3,14	0/0:13,0:15:6.15:0,6,29	1/1:15,5:20:6.01:70,6,0	./.	0/0:31,0:31:9.85:0,10,149	1/1:7,5:12:3.01:44,3,0	./.	./.	./.	0/0:11,0:12:2.73:0,3,14	0/0:9,0:9:4.35:0,4,17	0/0:30,0:38:16.94:0,17,84	0/1:16,0:16:12.08:95,0,12	1/1:22,0:23:5.02:31,5,0	0/0:11,0:15:5.68:0,6,28	./.
chr10	41142359	.	A	ACA	425.62	PASS	AB=1.000;AC=15;AF=0.357;AN=42;BaseQRankSum=-3.428;DP=590;FS=4.529;HRun=0;HaplotypeScore=92.3506;InbreedingCoeff=0.4140;MQ=51.50;MQ0=22;MQRankSum=0.010;QD=1.93;ReadPosRankSum=-3.855;VQSLOD=0.7441;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:47,0:42:20.97:197,21,0	./.	./.	./.	0/0:11,0:11:2.58:0,3,14	0/0:17,0:17:5.68:0,6,29	0/0:27,0:25:1.85:0,2,12	./.	0/0:25,0:25:5.58:0,6,27	1/1:20,4:22:12.02:144,12,0	0/1:9,0:9:0:0,0,0	0/0:21,0:21:5.85:0,6,46	0/0:14,0:14:2.82:0,3,14	0/0:20,0:20:4.71:0,5,26	1/1:20,0:20:3.01:44,3,0	./.	0/0:42,0:42:18.22:0,18,161	1/1:11,0:11:3.01:44,3,0	1/1:15,0:13:0.47:1,0,0	./.	0/1:52,0:49:0:0,0,0	0/0:11,0:11:2.84:0,3,14	0/0:13,0:13:4.09:0,4,17	0/0:54,0:53:16.94:0,17,84	0/1:16,0:16:12.08:95,0,12	1/1:25,0:23:3:26,3,0	0/0:14,0:13:5.68:0,6,28	./.
chr10	41143132	.	C	CG	1236.43	PASS	AB=0.876;AC=21;AF=0.404;AN=52;BaseQRankSum=5.762;DP=318;FS=38.363;HRun=1;HaplotypeScore=45.0848;InbreedingCoeff=0.4700;MQ=44.71;MQ0=16;MQRankSum=-8.481;QD=11.66;ReadPosRankSum=-0.376;VQSLOD=-0.2839;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:37:87.09:0,87,1082	0/0:12,0:10:27.09:0,27,350	0/0:22,0:6:18.06:0,18,232	0/0:20,0:5:15.05:0,15,194	./.	1/1:0,5:5:3.01:45,3,0	1/1:0,1:1:3.01:45,3,0	./.	0/0:21,0:20:39.13:0,39,505	0/1:15,2:17:41.01:41,0,497	0/0:13,0:12:24.08:0,24,311	1/1:0,7:6:15.05:224,15,0	0/0:9,0:8:21.07:0,21,272	1/1:0,6:6:18.05:227,18,0	0/0:14,1:13:27.09:0,27,350	1/1:0,2:2:6.02:90,6,0	0/0:4,0:4:5.93:0,6,40	0/0:14,0:14:33:0,33,405	0/0:8,0:7:17.69:0,18,110	0/1:4,2:4:12.50:14,0,13	0/1:14,0:10:4.43:4,0,55	0/0:9,0:9:21.07:0,21,272	1/1:1,5:6:9.03:135,9,0	0/1:12,3:13:27.96:75,0,28	0/0:14,0:12:36.05:0,36,446	1/1:6,5:7:0.11:206,0,0	1/1:0,7:7:18.06:269,18,0	0/1:8,1:5:22.01:39,0,22
chr10	41149576	.	AT	A	1747.16	PASS	AB=0.900;AC=33;AF=0.589;AN=56;BaseQRankSum=4.154;DP=281;FS=2.160;HRun=1;HaplotypeScore=28.9185;InbreedingCoeff=0.8029;MQ=43.44;MQ0=21;MQRankSum=-6.322;QD=9.82;ReadPosRankSum=-1.768;VQSLOD=0.6382;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:15:10.74:0,11,67	0/0:3,0:3:9.03:0,9,104	0/1:8,1:3:1.34:1,0,28	0/0:5,0:2:1.55:0,2,4	1/1:14,2:15:28.78:172,29,0	1/1:0,7:7:9.03:117,9,0	1/1:8,3:10:29.88:278,30,0	1/1:24,0:21:44.47:277,44,0	0/0:11,0:10:23.99:0,24,258	0/0:11,0:11:32.70:0,33,282	0/0:19,0:18:47.52:0,48,403	1/1:2,5:5:5.93:40,6,0	0/0:4,0:2:5.96:0,6,54	1/1:7,0:4:9.75:59,10,0	0/0:4,0:4:12.03:0,12,136	1/1:7,0:6:6.76:45,7,0	1/1:7,0:6:9.75:61,10,0	0/0:16,0:14:22.03:0,22,367	1/1:11,1:9:23.51:156,24,0	1/1:13,1:14:26.93:150,27,0	1/1:6,0:6:6.32:35,6,0	0/0:3,0:2:5.95:0,6,50	1/1:8,3:11:29.19:212,29,0	1/1:2,7:8:8.94:81,9,0	0/0:11,0:11:22.57:0,23,235	1/1:9,0:8:12.03:67,12,0	1/1:7,0:7:13.70:85,14,0	1/1:15,0:11:20:115,20,0
chr10	41151099	.	GA	G	5739.39	PASS	AB=0.741;AC=32;AF=0.571;AN=56;BaseQRankSum=14.983;DP=559;FS=3.152;HRun=12;HaplotypeScore=97.8939;InbreedingCoeff=0.8873;MQ=73.29;MQ0=0;MQRankSum=1.459;QD=16.64;ReadPosRankSum=1.247;VQSLOD=5.4958;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:38,3:42:64.52:0,65,979	0/0:9,0:9:21.04:0,21,213	0/1:10,2:11:12.36:12,0,41	0/0:14,0:14:14.89:0,15,113	1/1:5,30:37:50.64:569,51,0	1/1:3,16:21:53.28:398,53,0	1/1:4,21:25:65.73:509,66,0	1/1:8,16:24:55.82:411,56,0	0/0:24,1:28:29.77:0,30,478	0/0:22,0:23:50.07:0,50,515	0/0:14,0:14:18.03:0,18,178	1/1:2,8:10:20.92:162,21,0	0/0:11,0:11:29.98:0,30,285	1/1:5,15:20:32.81:250,33,0	0/0:17,0:17:33.03:0,33,317	1/1:2,9:12:28.62:203,29,0	1/1:3,46:50:99:911,119,0	0/0:18,0:18:51.06:0,51,507	1/1:2,7:9:20.91:162,21,0	1/1:3,15:19:46.18:334,46,0	1/1:3,8:12:26.87:207,27,0	0/0:25,0:25:43.18:0,43,495	0/1:4,5:10:0.12:98,0,0	1/1:1,25:27:71.69:553,72,0	0/0:13,0:13:32.90:0,33,319	1/1:7,19:26:59.46:448,59,0	1/1:8,13:22:47.22:349,47,0	1/1:2,7:9:20.91:162,21,0
chr10	41152038	.	CGCCTG	C	8085.04	PASS	AB=1.000;AC=33;AF=0.589;AN=56;BaseQRankSum=7.453;DP=597;FS=3.103;HRun=0;HaplotypeScore=133.7530;InbreedingCoeff=0.8824;MQ=102.33;MQ0=5;MQRankSum=-1.796;QD=23.85;ReadPosRankSum=3.357;VQSLOD=4.7974;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:96.18:0,96,2176	0/0:8,0:8:15.05:0,15,418	0/0:29,0:23:17.80:0,18,223	0/0:87,0:67:7.82:0,8,432	1/1:6,13:19:30.10:510,30,0	1/1:4,10:14:18.06:335,18,0	1/1:8,22:30:39.13:727,39,0	1/1:14,6:20:11.98:136,12,0	0/0:19,0:19:39.13:0,39,1100	0/1:25,0:25:8.70:9,0,981	0/0:14,0:14:30.05:0,30,601	1/1:5,16:21:33.11:615,33,0	0/0:6,0:6:12.04:0,12,275	1/1:5,16:21:36.12:671,36,0	0/0:9,0:9:21.04:0,21,480	1/1:2,8:10:18.06:336,18,0	1/1:5,20:25:45.15:839,45,0	0/0:16,0:16:42.14:0,42,1183	1/1:9,8:17:23.83:287,24,0	1/1:7,5:12:14.97:206,15,0	1/1:17,32:49:48.16:895,48,0	0/0:12,0:12:6.02:0,6,166	1/1:4,7:11:9.50:168,10,0	1/1:2,21:23:50.89:951,51,0	0/0:15,0:15:24.08:0,24,656	1/1:3,15:18:42.01:671,42,0	1/1:2,9:11:21.07:392,21,0	1/1:4,9:13:18.06:336,18,0
chr10	41152585	.	A	AT	1817.18	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=1.872;DP=532;FS=1.010;HRun=0;HaplotypeScore=82.5559;InbreedingCoeff=0.9887;MQ=87.69;MQ0=2;MQRankSum=-1.876;QD=20.42;ReadPosRankSum=4.234;VQSLOD=5.7372;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:69.12:0,69,905	0/0:9,0:9:27.08:0,27,362	0/0:31,0:26:66.05:0,66,814	0/0:27,0:25:62.94:0,63,776	0/0:24,0:24:67.07:0,67,668	1/1:2,21:23:62.19:657,62,0	1/1:4,9:13:13.39:277,13,0	0/0:40,0:40:99:0,112,939	0/0:15,0:15:45.10:0,45,603	0/0:20,0:20:54.18:0,54,740	0/0:21,0:21:57.06:0,57,768	1/1:3,14:17:23.72:393,24,0	0/0:11,0:11:30.10:0,30,419	0/0:17,0:17:48.05:0,48,549	0/0:11,0:11:33.08:0,33,427	0/0:16,0:16:41.97:0,42,449	0/0:19,0:19:48.12:0,48,569	0/0:17,0:17:51.17:0,51,711	0/0:20,0:20:59.59:0,60,523	0/0:20,0:20:59.27:0,59,508	0/0:22,0:22:55.19:0,55,366	0/0:17,0:17:51.14:0,51,678	1/1:4,18:22:44.52:449,45,0	1/1:2,12:14:21.03:215,21,0	0/0:19,0:19:57.19:0,57,794	0/0:18,0:18:50.66:0,51,421	0/0:17,0:17:41.20:0,41,310	0/0:7,0:7:14.62:0,15,105
chr10	41152586	.	G	GA	6275.07	PASS	AB=0.545;AC=31;AF=0.554;AN=56;BaseQRankSum=-0.726;DP=537;FS=3.758;HRun=9;HaplotypeScore=67.1204;InbreedingCoeff=0.9242;MQ=86.92;MQ0=2;MQRankSum=-3.504;QD=19.92;ReadPosRankSum=0.199;VQSLOD=5.3492;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:65.96:0,66,572	0/0:9,0:9:26.98:0,27,231	0/0:29,0:25:42.12:0,42,332	0/0:28,0:25:29.69:0,30,280	1/1:8,1:25:49.07:285,49,0	1/1:23,0:23:63.17:696,63,0	1/1:13,0:13:4.09:272,4,0	1/1:9,32:41:90.23:986,90,0	0/0:15,0:15:23.92:0,24,204	0/0:20,0:20:47.97:0,48,410	0/0:20,1:21:26.83:0,27,456	1/1:17,0:17:16.12:404,16,0	0/0:11,0:11:29.98:0,30,256	1/1:6,1:18:31.32:173,31,0	0/0:10,0:10:29.99:0,30,260	1/1:1,3:17:37.30:223,37,0	1/1:4,0:18:31.25:156,31,0	0/0:18,0:18:44.98:0,45,391	1/1:6,15:21:34.62:420,35,0	1/1:6,14:20:16.06:405,16,0	1/1:2,19:21:48.13:530,48,0	0/0:17,0:17:47.94:0,48,409	1/1:22,0:22:50.94:527,51,0	1/1:14,0:14:26.39:279,26,0	0/0:19,0:19:47.99:0,48,417	0/1:3,15:18:0.98:447,0,1	1/1:4,14:18:10.04:339,10,0	1/1:1,8:9:12.03:133,12,0
chr10	41153358	.	CTTATCTAT	C	4059.47	PASS	AB=0.620;AC=26;AF=0.464;AN=56;BaseQRankSum=2.223;DP=622;FS=6.764;HRun=0;HaplotypeScore=148.3049;InbreedingCoeff=0.6745;MQ=68.24;MQ0=2;MQRankSum=-1.631;QD=12.61;ReadPosRankSum=-2.428;VQSLOD=1.7497;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:56.63:0,57,846	0/0:8,0:8:24.01:0,24,379	0/0:22,0:13:29.18:0,29,328	0/0:27,0:22:42.95:0,43,533	0/1:24,0:25:99:251,0,831	0/0:0,0:21:9.03:0,9,29	0/1:0,0:15:1.59:2,0,3	1/1:35,0:35:99:906,105,0	0/0:29,0:29:76.08:0,76,987	0/0:44,0:44:99:0,132,2816	0/0:26,0:25:75.07:0,75,1532	1/1:0,0:10:6.02:142,6,0	0/0:16,0:16:39.01:0,39,434	1/1:0,0:19:3.01:52,3,0	0/0:27,0:27:81.16:0,81,2028	1/1:15,0:15:44.86:370,45,0	1/1:1,0:16:8.94:111,9,0	0/0:15,0:15:35.94:0,36,349	1/1:0,15:15:44.27:466,44,0	1/1:0,26:26:29.30:267,29,0	0/1:1,0:30:7.67:8,0,25	0/0:26,0:26:69.01:0,69,802	1/1:0,24:24:5.29:57,5,0	1/1:18,3:20:29.11:265,29,0	0/0:19,0:19:57.06:0,57,926	0/1:1,0:26:33.24:375,0,33	1/1:0,29:29:24.08:610,24,0	1/1:0,16:16:6.02:178,6,0
chr10	41153359	.	T	TTATCTATC	834.98	PASS	AB=1.000;AC=15;AF=0.326;AN=46;BaseQRankSum=1.191;DP=633;FS=3.995;HRun=0;HaplotypeScore=168.5799;InbreedingCoeff=0.4313;MQ=67.07;MQ0=4;MQRankSum=-2.203;QD=4.05;ReadPosRankSum=-3.126;VQSLOD=1.7315;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:4.61:0,5,159	1/1:10,0:10:9.03:300,9,0	./.	./.	0/0:25,0:25:27.06:0,27,470	0/0:21,0:21:11.25:0,11,154	1/1:15,0:15:2.37:8,2,0	./.	1/1:26,4:32:9.01:239,9,0	0/0:44,0:44:45.10:0,45,812	0/0:26,0:25:21.06:0,21,419	0/1:10,0:10:1.69:22,0,2	1/1:12,0:16:2.99:24,3,0	0/0:19,0:19:0:0,0,0	0/0:26,0:26:36.12:0,36,854	./.	0/1:17,0:17:38.76:39,0,49	0/0:12,0:15:3.01:0,3,56	0/0:16,0:15:5.51:0,6,59	0/1:26,0:26:0.21:0,0,0	0/0:30,0:30:4.26:0,4,183	1/1:30,0:30:12.01:319,12,0	./.	0/1:21,0:20:0:1,0,0	0/0:20,0:20:9.03:0,9,216	0/0:26,0:26:17.99:0,18,236	0/1:29,0:29:21.52:22,0,119	0/0:16,0:16:6.02:0,6,91
chr10	41154256	.	CG	C	887.36	PASS	AC=34;AF=0.895;AN=38;BaseQRankSum=0.265;DP=155;FS=3.408;HRun=4;HaplotypeScore=24.0660;InbreedingCoeff=0.3033;MQ=49.78;MQ0=35;MQRankSum=-0.020;QD=9.65;ReadPosRankSum=0.633;VQSLOD=0.4069;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,5:5:11.97:96,12,0	1/1:0,3:3:2.99:24,3,0	0/0:14,0:3:9.02:0,9,104	./.	./.	0/0:3,2:3:3.01:0,3,37	./.	1/1:7,0:1:2.60:10,3,0	1/1:1,6:6:14.96:120,15,0	1/1:2,9:9:20.39:177,20,0	1/1:3,3:5:15.02:150,15,0	1/1:4,3:4:3.01:34,3,0	1/1:0,2:2:3:25,3,0	1/1:1,5:2:6:58,6,0	1/1:1,1:2:2.98:22,3,0	./.	1/1:1,1:1:2.99:23,3,0	./.	1/1:7,2:2:6.02:70,6,0	./.	./.	1/1:7,3:5:5.24:21,5,0	1/1:3,3:4:5.99:48,6,0	1/1:1,1:1:2.98:21,3,0	1/1:0,4:4:8.98:71,9,0	1/1:0,2:1:2.97:20,3,0	./.	./.
chr10	41154263	.	C	CG	1252.68	PASS	AB=0.813;AC=34;AF=0.850;AN=40;BaseQRankSum=-0.717;DP=116;FS=0.000;HRun=1;HaplotypeScore=25.1699;InbreedingCoeff=0.2876;MQ=52.13;MQ0=5;MQRankSum=-1.769;QD=15.47;ReadPosRankSum=1.132;VQSLOD=3.1931;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,5:5:12.03:131,12,0	1/1:0,3:3:3.01:33,3,0	0/0:13,0:3:8.61:0,9,83	0/1:15,0:2:0:0,0,0	./.	0/0:2,2:2:6.02:0,6,71	./.	1/1:1,0:1:2.97:20,3,0	1/1:2,5:7:18.01:184,18,0	1/1:0,9:8:24.04:289,24,0	1/1:0,6:6:14.99:162,15,0	./.	1/1:1,1:2:3.01:33,3,0	1/1:1,4:2:3.01:32,3,0	1/1:0,1:1:3.01:31,3,0	./.	1/1:0,1:1:3.01:33,3,0	./.	1/1:3,0:2:6.02:70,6,0	1/1:0,5:3:3.01:43,3,0	./.	1/1:1,2:3:6.02:88,6,0	0/1:2,3:3:4.89:29,0,5	1/1:0,1:1:3.01:30,3,0	1/1:3,3:6:11.99:122,12,0	1/1:1,1:1:3.01:32,3,0	./.	./.
chr10	41154268	.	GA	G	355.16	PASS	AB=1.000;AC=17;AF=0.500;AN=34;BaseQRankSum=2.364;DP=118;FS=5.911;HRun=1;HaplotypeScore=23.3895;InbreedingCoeff=0.4468;MQ=38.80;MQ0=17;MQRankSum=0.884;QD=7.25;ReadPosRankSum=4.262;VQSLOD=0.9384;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:3:5.90:0,6,37	0/0:3,0:3:2.94:0,3,18	0/0:11,0:2:2.99:0,3,23	./.	./.	1/1:3,2:3:5.95:53,6,0	./.	0/0:3,0:1:2.97:0,3,20	0/1:5,0:5:4.50:45,0,5	1/1:10,0:8:22.48:107,22,0	1/1:4,2:6:14.87:119,15,0	./.	./.	0/0:5,0:1:2.96:0,3,19	0/0:1,0:1:2.94:0,3,18	./.	0/0:1,0:1:2.94:0,3,18	./.	./.	1/1:6,0:3:2.96:19,3,0	./.	1/1:3,0:2:5.82:33,6,0	1/1:4,0:2:5.70:29,6,0	0/0:1,0:1:2.92:0,3,17	1/1:6,0:5:11.52:61,12,0	1/1:4,0:1:2.84:14,3,0	./.	./.
chr10	41154360	.	A	AC	668.49	PASS	AB=0.615;AC=15;AF=0.341;AN=44;BaseQRankSum=3.359;DP=148;DS;FS=39.627;HRun=1;HaplotypeScore=23.2020;InbreedingCoeff=0.3378;MQ=31.85;MQ0=31;MQRankSum=-2.320;QD=14.86;ReadPosRankSum=0.217;VQSLOD=0.7653;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:8:21.03:0,21,254	1/1:0,2:2:5.95:63,6,0	./.	0/0:7,0:1:3:0,3,29	1/1:0,2:2:5.85:34,6,0	0/0:6,0:4:5.98:0,6,59	1/1:6,1:2:3.01:44,3,0	./.	0/0:3,0:3:9.03:0,9,116	0/0:5,0:2:6.02:0,6,78	1/1:2,2:3:2.88:15,3,0	0/0:14,0:13:30.05:0,30,368	0/0:6,0:4:9.03:0,9,116	0/0:5,0:5:15.05:0,15,194	0/0:4,1:3:8.96:0,9,95	./.	0/0:1,0:1:3.01:0,3,39	./.	0/0:16,0:3:6.02:0,6,78	0/1:4,2:5:29.87:45,0,30	0/0:5,0:3:6.02:0,6,77	0/0:5,1:3:2.96:0,3,19	0/1:2,8:10:32.84:189,0,33	./.	0/1:1,6:7:17.72:247,0,18	1/1:3,1:2:3.01:39,3,0	./.	1/1:0,3:3:9.03:134,9,0
chr10	41154388	.	A	AC	952.10	PASS	AC=22;AF=0.917;AN=24;BaseQRankSum=-1.733;DP=65;FS=13.979;HRun=1;HaplotypeScore=16.1812;InbreedingCoeff=0.1823;MQ=38.66;MQ0=16;MQRankSum=-1.733;QD=25.73;ReadPosRankSum=-0.208;VQSLOD=1.5950;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	1/1:0,1:1:3.01:45,3,0	0/0:3,0:1:2.98:0,3,22	./.	./.	./.	./.	./.	./.	1/1:1,3:3:6.01:70,6,0	1/1:1,2:2:6.02:83,6,0	./.	./.	./.	./.	./.	1/1:0,1:1:3.01:45,3,0	./.	./.	1/1:1,2:2:6.02:83,6,0	1/1:3,1:2:3.01:44,3,0	1/1:2,1:2:3.01:45,3,0	1/1:2,5:6:12.04:176,12,0	./.	1/1:0,6:6:18.06:267,18,0	1/1:0,1:1:3.01:45,3,0	./.	1/1:1,3:3:9.03:134,9,0
chr10	41156902	.	AGTACT	A	2745.38	PASS	AB=0.868;AC=32;AF=0.667;AN=48;BaseQRankSum=7.494;DP=383;FS=21.473;HRun=0;HaplotypeScore=68.7783;InbreedingCoeff=-0.2042;MQ=71.62;MQ0=71;MQRankSum=-9.976;QD=8.12;ReadPosRankSum=1.744;VQSLOD=0.3622;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:24,2:25:56.40:56,0,1870	0/1:15,2:16:77.52:78,0,1201	0/1:26,6:22:99:209,0,863	0/1:22,3:20:68:68,0,911	1/1:4,5:5:15.05:314,15,0	./.	./.	1/1:5,0:2:2.98:22,3,0	0/1:21,3:22:71.42:71,0,1388	0/1:21,1:20:2.68:3,0,1707	0/1:26,4:25:99:185,0,1527	1/1:0,3:3:9.03:188,9,0	0/1:23,1:20:5.65:6,0,1511	./.	0/1:26,6:32:99:110,0,2032	1/1:1,4:4:9.03:188,9,0	1/1:1,5:5:12.04:251,12,0	0/0:13,0:9:27.09:0,27,826	0/1:7,2:4:54.79:99,0,55	1/1:0,1:1:3.01:63,3,0	1/1:21,2:3:6.02:126,6,0	0/1:21,2:20:65.40:65,0,1579	1/1:1,2:2:6.02:126,6,0	./.	0/0:22,1:23:3.44:0,3,1883	0/1:3,7:9:99:413,0,159	1/1:1,2:2:3.01:63,3,0	1/1:2,3:3:9.03:189,9,0
chr10	41156948	.	ATACG	A	455.94	PASS	AB=0.930;AC=12;AF=0.333;AN=36;BaseQRankSum=4.914;DP=511;FS=1.237;HRun=0;HaplotypeScore=37.7053;InbreedingCoeff=0.2878;MQ=29.94;MQ0=355;MQRankSum=-3.869;QD=3.71;ReadPosRankSum=1.328;VQSLOD=1.1515;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:16:45.09:0,45,1039	0/0:14,0:9:27.09:0,27,668	0/0:7,0:4:5.97:0,6,47	0/1:10,0:3:14.97:15,0,16	./.	./.	./.	./.	0/0:22,0:13:33.11:0,33,899	0/0:26,0:11:30.09:0,30,730	0/0:29,0:11:24.08:0,24,654	1/1:4,1:1:3.01:58,3,0	0/1:15,1:12:30.99:31,0,627	./.	0/1:22,2:18:86.08:86,0,624	1/1:6,2:4:6.02:116,6,0	./.	0/0:14,0:7:21.07:0,21,574	0/0:44,0:2:3.01:0,3,82	./.	1/1:39,2:2:6.02:116,6,0	0/0:26,0:12:24.08:0,24,654	./.	./.	0/0:16,0:10:24.08:0,24,654	0/1:10,2:4:99:104,0,118	./.	1/1:6,1:4:3.01:58,3,0
chr10	41157685	.	CAG	C	3823.56	PASS	AB=0.975;AC=30;AF=0.536;AN=56;BaseQRankSum=4.236;DP=449;FS=0.857;HRun=0;HaplotypeScore=92.7429;InbreedingCoeff=0.8538;MQ=83.89;MQ0=1;MQRankSum=-1.113;QD=13.66;ReadPosRankSum=0.902;VQSLOD=3.3112;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:39.09:0,39,471	0/0:8,0:8:24.08:0,24,364	0/0:26,0:22:12.24:0,12,452	0/0:16,0:13:25.44:0,25,191	0/1:14,0:14:4.42:93,0,4	0/1:18,1:19:0.09:212,0,0	1/1:15,2:18:28.17:306,28,0	1/1:27,1:28:49.98:292,50,0	0/0:17,0:17:48.10:0,48,551	0/0:19,0:19:56.95:0,57,642	0/0:22,0:22:56.92:0,57,634	1/1:1,7:8:15.05:225,15,0	0/0:11,0:11:30.03:0,30,308	1/1:9,0:9:1.78:46,2,0	0/0:8,0:8:21.05:0,21,233	1/1:15,1:16:25.08:207,25,0	1/1:22,0:22:14.88:105,15,0	0/0:4,0:4:12.04:0,12,143	1/1:23,3:26:33.27:412,33,0	1/1:37,1:38:56.35:407,56,0	1/1:10,0:10:13.72:61,14,0	0/0:10,0:10:30.04:0,30,314	1/1:2,8:12:36.09:472,36,0	1/1:0,13:13:36.12:547,36,0	0/0:8,0:8:21.05:0,21,254	1/1:20,0:20:10.01:185,10,0	1/1:20,1:21:38.45:200,38,0	1/1:5,0:6:12.22:53,12,0
chr10	41157686	.	AG	A	7474.89	PASS	AB=1.000;AC=34;AF=0.607;AN=56;BaseQRankSum=-0.226;DP=459;FS=19.955;HRun=1;HaplotypeScore=75.4286;InbreedingCoeff=0.8665;MQ=81.79;MQ0=1;MQRankSum=-0.992;QD=24.51;ReadPosRankSum=-2.704;VQSLOD=3.0457;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:38.36:0,38,311	0/0:8,0:8:23.96:0,24,255	0/0:25,1:21:9.70:0,10,317	0/1:15,0:12:11.63:12,0,81	1/1:11,3:14:30.81:305,31,0	1/1:12,7:19:47.89:514,48,0	1/1:10,7:17:47.67:532,48,0	1/1:2,25:27:77.19:835,77,0	0/0:19,0:19:47.76:0,48,371	0/0:21,0:21:10.44:0,10,357	0/0:22,0:22:53.35:0,53,418	1/1:7,0:7:14.95:116,15,0	0/0:12,0:12:29.85:0,30,225	1/1:6,4:10:25.24:279,25,0	0/1:9,0:9:0.37:0,0,125	1/1:7,9:16:42.09:516,42,0	1/1:1,21:22:30.99:415,31,0	0/0:4,0:4:11.90:0,12,85	1/1:16,9:25:72.20:746,72,0	1/1:23,16:39:95.50:1036,96,0	1/1:0,10:10:15.05:207,15,0	0/0:10,0:10:29.88:0,30,231	1/1:13,0:13:35.90:285,36,0	1/1:13,0:13:35.91:284,36,0	0/0:11,0:11:20.91:0,21,172	1/1:10,11:21:45.80:585,46,0	1/1:2,20:22:45.58:582,46,0	1/1:1,5:6:18.05:226,18,0
chr10	41157687	.	G	GA	2279.73	PASS	AB=0.930;AC=25;AF=0.446;AN=56;BaseQRankSum=-10.876;DP=473;FS=12.162;HRun=12;HaplotypeScore=104.1065;InbreedingCoeff=0.3010;MQ=81.96;MQ0=1;MQRankSum=0.299;QD=7.97;ReadPosRankSum=-2.881;VQSLOD=0.6446;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,16:21:8.04:226,8,0	0/1:6,2:8:34.48:34,0,107	0/0:27,0:22:7.53:0,8,114	0/1:14,0:12:15.86:16,0,16	0/1:14,0:14:11.19:52,0,11	0/1:19,0:19:35.73:47,0,36	0/0:18,0:18:21.66:0,22,66	0/1:27,0:27:15.24:105,0,15	1/1:4,15:19:17.16:328,17,0	1/1:5,15:24:58.16:476,58,0	1/1:5,18:24:19.30:312,19,0	0/0:9,0:9:11.56:0,12,34	1/1:5,8:13:18.03:175,18,0	0/1:10,0:10:4.83:32,0,5	1/1:4,5:10:20.86:184,21,0	0/1:16,0:16:2.90:3,0,35	0/0:22,0:22:14.08:0,14,39	1/1:2,4:6:12.02:117,12,0	0/0:25,0:25:10.06:0,10,69	0/1:38,0:38:47.77:71,0,48	0/0:10,0:10:7.77:0,8,21	1/1:4,6:10:18.03:175,18,0	0/0:13,0:13:22.15:0,22,67	0/0:13,0:13:26.64:0,27,81	0/1:3,8:12:4.05:113,0,4	0/0:22,0:22:0.45:0,0,39	0/0:22,0:22:0.39:0,0,34	0/0:6,0:6:11.76:0,12,40
chr10	41158823	.	TC	T	379.33	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=4.767;DP=389;FS=2.726;HRun=1;HaplotypeScore=67.4579;InbreedingCoeff=0.6399;MQ=66.18;MQ0=4;MQRankSum=-2.690;QD=10.25;ReadPosRankSum=-3.655;VQSLOD=0.2150;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:93.27:0,93,1393	0/0:8,0:8:24.08:0,24,373	0/0:22,0:13:32.61:0,33,396	0/0:23,0:17:44.91:0,45,597	0/0:17,0:17:27.05:0,27,379	0/0:18,0:17:47.81:0,48,577	0/0:20,0:19:46.42:0,46,579	0/1:16,0:16:48.97:49,0,248	0/0:19,0:19:57.19:0,57,891	0/0:13,0:13:39.12:0,39,584	0/0:8,0:8:24.08:0,24,373	1/1:0,2:2:6.02:75,6,0	0/0:6,0:6:18.06:0,18,272	0/0:8,0:8:0.81:0,1,299	0/0:7,0:7:18.06:0,18,288	0/0:13,0:13:23.65:0,24,275	0/0:19,0:19:35.68:0,36,353	0/0:22,0:22:66.22:0,66,1033	0/0:14,0:14:2.65:0,3,381	0/0:18,0:18:50.88:0,51,563	0/0:14,0:14:10.53:0,11,147	0/0:9,0:9:27.09:0,27,422	1/1:7,5:14:15.66:270,16,0	1/1:3,2:5:11.99:120,12,0	0/0:13,0:13:33.06:0,33,481	0/0:10,0:10:29.30:0,29,321	0/0:14,0:14:21.75:0,22,314	0/0:4,0:4:5.91:0,6,54
chr10	41158826	.	C	CTTT	3085.61	PASS	AB=0.647;AC=29;AF=0.518;AN=56;BaseQRankSum=8.615;DP=375;FS=2.833;HRun=1;HaplotypeScore=71.1500;InbreedingCoeff=0.7339;MQ=61.24;MQ0=3;MQRankSum=-2.820;QD=15.43;ReadPosRankSum=-0.084;VQSLOD=0.4368;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:93.25:0,93,1518	0/0:7,0:7:21.05:0,21,338	0/0:19,0:11:17.54:0,18,250	0/0:21,0:15:39.52:0,40,540	1/1:7,7:16:26.78:339,27,0	1/1:7,0:16:33.90:193,34,0	0/1:10,0:19:35.37:83,0,35	1/1:3,10:14:25.14:369,25,0	0/0:18,0:18:51.16:0,51,851	0/0:13,0:13:36.12:0,36,629	0/0:8,0:8:24.08:0,24,400	1/1:2,0:2:5.36:22,5,0	0/0:6,0:6:18.06:0,18,289	1/1:9,0:9:5.99:75,6,0	0/0:7,0:7:18.06:0,18,314	1/1:2,10:13:17.81:344,18,0	1/1:6,11:19:21.55:387,22,0	0/0:22,0:22:66.18:0,66,1105	1/1:6,6:14:24.28:328,24,0	1/1:3,10:17:26.77:323,27,0	1/1:1,11:13:11.98:160,12,0	0/0:10,0:10:27.08:0,27,443	1/1:13,0:13:13.38:102,13,0	1/1:5,0:5:6.96:25,7,0	0/0:12,0:12:26.30:0,26,406	0/1:7,4:11:57.10:178,0,57	0/1:2,11:13:1.07:312,0,1	1/1:2,2:4:2.36:58,2,0
chr10	41167308	.	T	TTA	12288.28	PASS	AB=0.531;AC=31;AF=0.554;AN=56;BaseQRankSum=-9.126;DP=515;FS=2.938;HRun=0;HaplotypeScore=59.6473;InbreedingCoeff=0.9176;MQ=77.14;MQ0=1;MQRankSum=-1.052;QD=38.28;ReadPosRankSum=2.431;VQSLOD=6.8518;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:72.04:0,72,917	0/0:3,0:3:9.03:0,9,128	0/0:15,0:15:37.66:0,38,438	0/0:15,0:15:29.39:0,29,416	1/1:0,24:25:71.84:1211,72,0	1/1:0,17:18:48.16:893,48,0	1/1:1,10:12:21.07:391,21,0	1/1:0,16:18:54.10:803,54,0	0/0:20,0:20:60.18:0,60,822	0/0:25,0:25:75.24:0,75,1040	0/0:21,0:21:60.16:0,60,817	1/1:1,0:22:27.84:213,28,0	0/0:15,0:15:42.12:0,42,578	1/1:0,15:15:30.10:558,30,0	0/0:8,0:8:24.07:0,24,325	1/1:1,12:13:33.11:614,33,0	1/1:0,21:22:57.03:1018,57,0	0/0:7,0:7:21.07:0,21,290	1/1:1,20:22:63.15:1048,63,0	1/1:0,26:28:83.43:1403,83,0	1/1:0,13:15:32.94:572,33,0	0/0:16,0:16:45.13:0,45,606	1/1:2,0:27:23.43:261,23,0	1/1:0,0:14:39.77:195,40,0	0/0:25,0:25:75.24:0,75,1055	0/1:3,22:25:37.89:953,0,38	1/1:0,25:27:72.02:1321,72,0	1/1:0,15:16:47.99:834,48,0
chr10	41167466	.	C	CT	764.33	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.389;DP=458;FS=2.797;HRun=1;HaplotypeScore=68.7205;InbreedingCoeff=0.9519;MQ=76.81;MQ0=0;MQRankSum=-1.673;QD=28.31;ReadPosRankSum=0.467;VQSLOD=3.4430;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:96.27:0,96,1211	0/0:3,0:3:9.03:0,9,116	0/0:16,0:16:28.60:0,29,393	0/0:24,0:22:58.75:0,59,727	0/0:22,0:22:66.21:0,66,852	1/1:2,17:19:49.36:638,49,0	1/1:0,8:8:18.06:246,18,0	0/0:24,0:24:60.18:0,60,763	0/0:13,0:13:39.10:0,39,478	0/0:26,0:26:75.24:0,75,973	0/0:21,0:21:57.18:0,57,739	0/0:15,0:15:45.15:0,45,584	0/0:10,0:10:30.10:0,30,388	0/0:8,0:8:24.08:0,24,312	0/0:6,0:6:18.06:0,18,233	0/0:9,0:9:27.09:0,27,350	0/0:25,0:25:75.20:0,75,939	0/0:6,0:6:15.05:0,15,195	0/0:13,0:13:39.13:0,39,506	0/0:27,0:27:75.22:0,75,945	0/0:17,0:17:38.96:0,39,480	0/0:14,0:14:42.12:0,42,529	0/0:25,0:25:72.23:0,72,930	0/0:16,0:16:48.16:0,48,623	0/0:14,0:14:37.80:0,38,504	0/0:19,0:19:54.17:0,54,687	0/0:15,0:15:45.15:0,45,582	0/0:8,0:8:24.08:0,24,312
chr10	41168392	.	CTTTTTT	C	8457.30	PASS	AB=0.625;AC=31;AF=0.554;AN=56;BaseQRankSum=-9.552;DP=546;FS=9.694;HRun=15;HaplotypeScore=129.1737;InbreedingCoeff=0.8294;MQ=65.48;MQ0=10;MQRankSum=-7.087;QD=30.53;ReadPosRankSum=3.042;VQSLOD=2.7875;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:25:51.11:0,51,660	0/0:5,0:4:6.02:0,6,196	0/0:55,0:25:29.52:0,30,642	0/0:47,0:18:30.55:0,31,289	1/1:4,24:28:53.65:809,54,0	1/1:6,12:18:26.94:463,27,0	1/1:1,11:12:17.96:296,18,0	1/1:13,13:24:0.09:527,0,0	0/0:5,0:14:34.78:0,35,283	0/0:9,0:24:49.81:0,50,441	0/0:6,0:23:35.73:0,36,400	1/1:1,10:11:17.97:293,18,0	0/0:5,0:12:8.94:0,9,76	1/1:1,9:10:18.05:333,18,0	0/0:3,0:11:18.01:0,18,159	1/1:1,11:12:2.74:421,3,0	1/1:6,21:27:29.98:556,30,0	0/0:5,0:19:39.05:0,39,434	1/1:1,15:16:45.06:715,45,0	1/1:2,22:24:66.14:1167,66,0	1/1:2,6:8:8.89:128,9,0	0/0:2,0:15:41.99:0,42,362	1/1:4,16:19:35.98:667,36,0	1/1:4,11:15:14.59:277,15,0	0/0:0,0:13:30:0,30,276	1/1:2,19:21:44.94:820,45,0	1/1:2,22:23:50.92:831,51,0	0/1:2,3:5:33.14:155,0,33
chr10	41169861	.	C	CT	4465.69	PASS	AB=0.643;AC=29;AF=0.518;AN=56;BaseQRankSum=-7.982;DP=539;FS=8.494;HRun=10;HaplotypeScore=50.4322;InbreedingCoeff=0.7529;MQ=53.40;MQ0=20;MQRankSum=0.448;QD=14.36;ReadPosRankSum=2.269;VQSLOD=4.3625;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:57.13:0,57,574	0/0:5,0:5:8.97:0,9,71	0/0:32,0:5:8.82:0,9,58	0/0:35,0:10:11.12:0,11,72	1/1:9,8:17:16.82:216,17,0	1/1:3,3:11:20.42:153,20,0	1/1:7,0:17:28.51:146,29,0	0/1:12,13:18:0.62:182,0,1	0/0:9,0:10:9.99:0,10,141	0/0:15,0:14:29.96:0,30,246	0/0:13,1:15:3:0,3,220	1/1:4,13:15:27.07:288,27,0	0/0:14,0:13:35.95:0,36,295	1/1:3,13:15:32.92:334,33,0	0/0:9,0:10:20.01:0,20,154	1/1:7,11:18:30.08:320,30,0	1/1:10,24:29:26.49:487,26,0	0/0:26,0:25:43.77:0,44,345	0/1:11,10:17:3.58:171,0,4	1/1:7,25:31:53.13:583,53,0	1/1:3,10:13:21.05:224,21,0	0/0:6,0:6:5.97:0,6,49	1/1:6,10:16:24.06:256,24,0	1/1:4,13:17:5.80:347,6,0	0/0:16,0:17:37.98:0,38,301	0/1:7,15:17:16.12:255,0,16	1/1:6,16:21:33.07:344,33,0	1/1:0,8:8:15.04:160,15,0
chr10	41171474	.	T	TGGA	18692.54	PASS	AB=0.538;AC=29;AF=0.518;AN=56;BaseQRankSum=-14.071;DP=574;FS=1.037;HRun=0;HaplotypeScore=77.8465;InbreedingCoeff=0.8083;MQ=85.00;MQ0=0;MQRankSum=-6.152;QD=55.30;ReadPosRankSum=1.525;VQSLOD=7.0772;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,120,2033	0/0:5,0:5:12.04:0,12,205	0/0:20,0:20:51.16:0,51,851	0/0:19,0:19:21.33:0,21,582	1/1:3,16:20:54.19:1232,54,0	1/1:0,17:16:39.13:898,39,0	1/1:3,14:17:36.12:828,36,0	1/1:11,13:26:63.18:1282,63,0	0/0:16,0:16:48.15:0,48,786	0/0:13,0:13:39.13:0,39,653	0/0:24,0:24:72.23:0,72,1197	1/1:2,18:20:54.19:1244,54,0	0/0:16,0:16:42.14:0,42,717	1/1:2,18:20:57.20:1311,57,0	0/0:17,0:17:45.15:0,45,768	0/1:2,12:14:11.51:658,0,12	1/1:2,29:31:63.19:1450,63,0	0/0:20,0:20:54.16:0,54,892	1/1:2,26:32:90.31:1906,90,0	1/1:2,21:23:63.22:1449,63,0	1/1:2,25:27:75.26:1726,75,0	0/0:21,0:21:60.21:0,60,1017	1/1:1,13:16:36.12:828,36,0	0/1:4,21:25:51.18:986,0,51	0/0:23,0:23:69.22:0,69,1139	0/1:2,15:17:3.02:988,0,3	1/1:3,21:26:63.22:1421,63,0	1/1:0,7:7:21.07:484,21,0
chr10	41175116	.	TTTTTTTA	T	1450.94	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=-2.672;DP=516;FS=0.559;HRun=0;HaplotypeScore=118.7817;InbreedingCoeff=0.6587;MQ=59.20;MQ0=14;MQRankSum=-2.907;QD=17.27;ReadPosRankSum=-3.810;VQSLOD=2.0017;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:6.70:0,7,833	0/0:11,0:11:32.96:0,33,756	0/0:54,0:13:10.05:0,10,324	0/0:49,0:8:13.30:0,13,149	1/1:5,15:20:50.85:697,51,0	0/0:12,0:12:1.37:0,1,73	0/0:6,0:6:15.03:0,15,284	0/0:23,0:23:38.06:0,38,794	0/0:17,0:17:33.44:0,33,874	0/0:25,0:25:50.04:0,50,1143	0/0:24,0:24:66.12:0,66,1418	0/0:9,0:8:18.01:0,18,228	0/0:8,0:8:18.01:0,18,380	1/1:2,10:12:10.40:186,10,0	0/0:13,0:13:31.54:0,32,647	1/1:9,2:11:27.89:388,28,0	1/1:17,4:21:13.30:310,13,0	0/0:20,0:20:57.15:0,57,1203	0/0:36,0:32:16.93:0,17,1213	0/1:20,0:20:26.39:26,0,577	0/0:4,0:3:5.98:0,6,48	0/0:4,0:4:2.91:0,3,25	0/0:15,0:15:24.75:0,25,440	0/0:7,0:7:14.91:0,15,220	0/0:20,0:20:56.85:0,57,1096	0/0:23,0:23:43.71:0,44,1079	0/0:18,0:18:9.41:0,9,362	0/0:1,0:1:3.01:0,3,58
chr10	41175117	.	TTTTTTA	T	1333.08	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=-1.290;DP=513;FS=0.568;HRun=0;HaplotypeScore=110.3480;InbreedingCoeff=0.5556;MQ=59.05;MQ0=14;MQRankSum=-3.356;QD=9.73;ReadPosRankSum=-3.996;VQSLOD=0.7282;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:24.33:0,24,756	0/0:11,0:11:33.01:0,33,658	0/0:57,0:13:19.81:0,20,297	0/0:49,0:8:12.45:0,12,114	1/1:19,1:20:50.61:613,51,0	0/0:12,0:12:1.34:0,1,60	0/0:6,0:6:14.78:0,15,228	0/0:23,0:23:36.77:0,37,662	0/0:16,0:16:31.10:0,31,739	0/0:24,0:24:46.45:0,46,937	0/0:24,0:24:65.91:0,66,1167	0/0:9,0:8:17.93:0,18,171	0/0:7,0:7:18:0,18,336	1/1:12,0:12:8.63:149,9,0	0/0:13,0:13:31.99:0,32,530	1/1:11,0:11:24.84:387,25,0	1/1:6,15:21:16.94:290,17,0	0/0:20,0:20:57:0,57,982	0/1:34,0:30:12.19:12,0,943	0/1:20,0:20:40.81:41,0,471	0/0:4,0:3:5.98:0,6,47	0/0:3,0:3:2.90:0,3,25	0/0:14,0:14:22.31:0,22,332	0/0:7,0:7:14.92:0,15,172	0/0:20,0:20:56.91:0,57,911	0/0:23,0:23:41.85:0,42,909	0/1:19,0:19:1.84:2,0,280	0/0:1,0:1:3.01:0,3,41
chr10	41175122	.	T	TA	5013.53	PASS	AB=0.926;AC=42;AF=0.778;AN=54;BaseQRankSum=-6.156;DP=516;FS=3.165;HRun=1;HaplotypeScore=67.7824;InbreedingCoeff=0.2003;MQ=59.70;MQ0=14;MQRankSum=3.863;QD=11.37;ReadPosRankSum=0.760;VQSLOD=3.1073;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:30,4:34:43.20:448,43,0	0/0:12,0:12:36.02:0,36,358	0/0:58,0:15:22.03:0,22,179	0/1:50,0:9:1.21:1,0,12	0/1:18,0:19:49.88:50,0,90	0/1:2,11:12:2.08:34,0,2	0/1:8,0:8:28.63:81,0,29	1/1:20,0:22:23.58:439,24,0	1/1:16,0:17:5.21:139,5,0	1/1:23,0:23:57.96:444,58,0	1/1:21,2:23:22.33:317,22,0	1/1:9,0:8:20.74:141,21,0	1/1:7,0:7:12.86:80,13,0	0/1:11,1:12:6.18:41,0,6	1/1:13,0:13:30.60:205,31,0	0/1:12,0:12:36.35:36,0,61	0/1:21,0:21:20.74:28,0,21	1/1:20,0:20:44.77:282,45,0	0/1:32,2:30:7.05:570,0,7	1/1:19,1:20:32.97:362,33,0	1/1:4,0:3:5.99:49,6,0	./.	1/1:13,0:13:38.40:266,38,0	1/1:5,0:5:14.16:76,14,0	1/1:19,0:19:40.09:264,40,0	1/1:21,0:22:46.47:486,46,0	1/1:20,0:20:19.51:142,20,0	1/1:1,0:1:3.01:31,3,0
chr10	41175123	.	A	AATT	5294.23	PASS	AB=0.978;AC=39;AF=0.722;AN=54;BaseQRankSum=-8.692;DP=514;FS=2.098;HRun=0;HaplotypeScore=84.4922;InbreedingCoeff=-0.0256;MQ=59.61;MQ0=14;MQRankSum=1.771;QD=12.06;ReadPosRankSum=-2.678;VQSLOD=4.2261;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,2:34:32.33:404,32,0	0/0:8,0:12:36.02:0,36,466	0/0:63,0:16:26.48:0,26,231	0/1:48,0:8:9.84:20,0,10	0/1:18,0:19:99:149,0,121	1/1:13,0:12:8.80:92,9,0	1/1:8,0:8:7.46:143,7,0	1/1:5,16:22:20.30:597,20,0	0/1:16,0:16:56.07:86,0,56	1/1:19,0:22:32.41:353,32,0	0/1:20,0:23:61.31:164,0,61	1/1:2,0:8:16.71:73,17,0	0/1:7,0:7:20.94:66,0,21	0/1:12,0:12:0.29:0,0,31	0/1:12,0:13:9.47:144,0,9	0/1:11,0:12:59.16:59,0,130	0/1:20,0:21:40.89:89,0,41	0/1:18,0:20:10.61:166,0,11	1/1:14,16:31:0.39:850,0,0	1/1:2,16:21:36.03:537,36,0	1/1:4,0:3:5.99:49,6,0	./.	1/1:6,0:13:34.61:205,35,0	1/1:1,0:5:5.40:19,5,0	0/1:15,0:18:9.88:142,0,10	1/1:3,0:22:28.41:597,28,0	1/1:1,16:20:4.93:231,5,0	1/1:0,0:1:3.01:60,3,0
chr10	41175852	.	TTAGTCTA	T	18944.65	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=19.612;DP=598;FS=0.311;HRun=0;HaplotypeScore=169.1751;InbreedingCoeff=0.9866;MQ=85.08;MQ0=0;MQRankSum=-18.894;QD=63.36;ReadPosRankSum=1.106;VQSLOD=4.8505;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,114,4577	0/0:14,0:14:39.13:0,39,1598	0/0:26,0:26:78.22:0,78,2679	0/0:22,0:22:63.18:0,63,2067	1/1:5,17:22:45.11:1072,45,0	1/1:4,22:26:69.24:1859,69,0	1/1:4,12:16:36.12:970,36,0	1/1:7,19:26:57.18:1432,57,0	0/0:38,0:38:99:0,114,4387	0/0:31,0:31:93.32:0,93,3773	0/0:30,0:30:90.31:0,90,3610	1/1:0,22:22:60.21:1616,60,0	0/0:19,0:19:54.17:0,54,2008	1/1:1,24:25:66.23:1776,66,0	0/0:25,0:25:75.26:0,75,3070	1/1:1,21:22:48.06:1293,48,0	1/1:3,9:12:21.07:566,21,0	0/0:9,0:9:24.55:0,25,972	1/1:4,9:13:27.09:682,27,0	1/1:1,23:24:69.23:1753,69,0	1/1:1,9:10:9.03:193,9,0	0/0:27,0:27:81.28:0,81,3261	1/1:2,21:23:60.20:1566,60,0	1/1:1,13:14:29.77:777,30,0	0/0:18,0:18:54.19:0,54,2138	1/1:1,19:20:57.20:1535,57,0	1/1:1,19:20:57.20:1533,57,0	1/1:0,4:4:12.04:323,12,0
chr10	41176182	.	G	GAAAATC	9362.30	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=15.450;DP=524;FS=9.101;HRun=0;HaplotypeScore=149.6432;InbreedingCoeff=0.9778;MQ=98.03;MQ0=0;MQRankSum=-14.340;QD=83.59;ReadPosRankSum=3.234;VQSLOD=6.3399;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,114,2782	0/0:13,0:13:39.13:0,39,994	0/0:29,0:29:87.30:0,87,2143	0/0:30,0:30:81.22:0,81,1870	1/1:2,10:14:36.43:1124,36,0	0/0:25,0:25:75.26:0,75,1921	0/0:25,0:25:72.23:0,72,1789	1/1:2,2:4:12.03:247,12,0	0/0:23,0:23:66.23:0,66,1691	0/0:34,0:34:99:0,99,2462	0/0:28,0:28:81.26:0,81,2024	0/0:21,0:21:60.19:0,60,1431	0/0:16,0:16:48.16:0,48,1227	1/1:0,13:13:39.13:1220,39,0	0/0:28,0:28:78.25:0,78,1947	1/1:0,10:10:30.10:958,30,0	1/1:1,6:7:18.06:572,18,0	0/0:11,0:11:30.10:0,30,766	1/1:2,7:9:27.08:725,27,0	1/1:4,11:15:36.11:1060,36,0	1/1:1,6:7:18.06:531,18,0	0/0:26,0:26:75.26:0,75,1867	0/0:23,0:23:63.20:0,63,1542	0/0:24,0:24:72.19:0,72,1701	0/0:18,0:18:54.10:0,54,1222	1/1:1,18:19:51.32:1699,51,0	1/1:1,11:12:29.74:1037,30,0	1/1:0,2:2:6.02:189,6,0
chr10	41176185	.	G	GCT	4431.33	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=15.524;DP=513;FS=3.631;HRun=0;HaplotypeScore=124.2655;InbreedingCoeff=0.9667;MQ=97.45;MQ0=0;MQRankSum=-14.122;QD=41.41;ReadPosRankSum=5.018;VQSLOD=6.2874;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,108,1762	0/0:13,0:13:39.13:0,39,632	0/0:29,0:29:84.29:0,84,1336	0/0:28,0:28:81.23:0,81,1288	1/1:3,10:13:34.83:463,35,0	0/0:26,0:26:78.27:0,78,1269	0/0:27,0:27:75.24:0,75,1195	1/1:0,2:2:6.02:93,6,0	0/0:24,0:24:69.24:0,69,1123	0/0:34,0:34:99:0,102,1641	0/0:27,0:27:81.28:0,81,1322	0/0:20,0:20:60.20:0,60,978	0/0:16,0:16:48.16:0,48,781	1/1:0,13:13:39.13:574,39,0	0/0:28,0:28:84.27:0,84,1346	1/1:0,10:10:30.10:461,30,0	1/1:2,6:8:18.06:274,18,0	0/0:11,0:11:30.10:0,30,488	1/1:0,7:7:21.07:327,21,0	1/1:3,11:14:33.11:478,33,0	1/1:1,6:7:18.04:230,18,0	0/0:26,0:26:75.26:0,75,1224	0/0:22,0:22:63.22:0,63,1027	0/0:23,0:23:69.24:0,69,1126	0/0:16,0:16:48.15:0,48,760	1/1:1,18:19:57.19:881,57,0	1/1:1,11:12:36.12:558,36,0	1/1:0,2:2:6.02:92,6,0
chr10	41176386	.	CTT	C	16315.75	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=14.921;DP=686;FS=0.588;HRun=3;HaplotypeScore=85.2066;InbreedingCoeff=0.9862;MQ=79.79;MQ0=2;MQRankSum=-5.516;QD=40.69;ReadPosRankSum=0.377;VQSLOD=4.2468;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:81.28:0,81,1544	0/0:4,0:4:12.04:0,12,232	0/0:17,0:17:51.17:0,51,944	0/0:17,0:17:48.16:0,48,908	1/1:0,27:27:69.23:1056,69,0	1/1:0,30:30:84.29:1286,84,0	1/1:0,20:20:54.18:827,54,0	1/1:2,40:41:99:1772,120,0	0/0:22,0:22:66.23:0,66,1268	0/0:36,0:36:99:0,108,2087	0/0:23,0:23:66.23:0,66,1275	1/1:0,20:20:57.19:873,57,0	0/0:25,0:25:75.23:0,75,1382	1/1:0,19:19:48.16:734,48,0	0/0:28,0:28:84.28:0,84,1585	1/1:0,15:15:42.14:642,42,0	1/1:1,22:23:63.21:964,63,0	0/0:22,0:22:60.13:0,60,1084	1/1:1,14:15:39.10:553,39,0	1/1:0,40:40:99:1654,108,0	1/1:0,19:19:48.16:735,48,0	0/0:31,0:31:87.28:0,87,1619	1/1:0,36:36:99:1516,99,0	1/1:0,29:29:75.25:1148,75,0	0/0:32,0:32:96.33:0,96,1855	1/1:2,21:23:8.25:903,8,0	1/1:0,31:29:75.25:1148,75,0	1/1:0,12:12:33.11:504,33,0
chr10	41177104	.	CT	C	5696.91	PASS	AB=0.879;AC=26;AF=0.464;AN=56;BaseQRankSum=11.141;DP=546;FS=0.000;HRun=10;HaplotypeScore=55.0631;InbreedingCoeff=0.8241;MQ=73.17;MQ0=1;MQRankSum=-1.266;QD=19.85;ReadPosRankSum=0.565;VQSLOD=5.5648;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,22:25:56.98:495,57,0	0/0:14,0:14:39.11:0,39,431	0/1:16,2:17:15.26:15,0,203	0/0:8,0:7:9.02:0,9,99	1/1:3,33:36:95.96:833,96,0	0/0:23,0:22:66.17:0,66,723	0/1:5,1:6:11.02:11,0,118	1/1:6,24:30:68.93:588,69,0	0/0:17,0:17:48.11:0,48,516	0/0:30,0:30:84.23:0,84,929	0/0:27,0:27:43.14:0,43,685	0/0:14,0:14:33.09:0,33,365	0/0:16,0:16:33.09:0,33,364	1/1:2,14:16:38.99:339,39,0	0/0:14,0:14:39.11:0,39,431	1/1:0,18:18:44.99:391,45,0	1/1:3,11:14:2.85:253,3,0	0/0:16,1:17:13.02:0,13,359	1/1:4,15:19:14.81:357,15,0	1/1:0,35:35:98.96:859,99,0	1/1:1,7:8:20.99:182,21,0	0/0:25,0:25:63.16:0,63,689	0/0:16,0:16:48.13:0,48,531	0/0:10,0:10:27.07:0,27,299	0/0:28,0:28:78.19:0,78,852	1/1:6,24:30:41.78:592,42,0	1/1:1,22:23:65.99:573,66,0	1/1:1,8:9:23.99:208,24,0
chr10	41178188	.	TTGTGTGTGTGTG	T	4506.88	PASS	AB=0.720;AC=18;AF=0.346;AN=52;BaseQRankSum=6.863;DP=578;FS=8.128;HRun=0;HaplotypeScore=200.7757;InbreedingCoeff=0.7332;MQ=62.74;MQ0=18;MQRankSum=-5.728;QD=22.42;ReadPosRankSum=0.299;VQSLOD=3.0934;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:39:66.23:0,66,3388	0/0:6,0:5:12.04:0,12,659	0/0:30,0:19:3.01:0,3,42	./.	1/1:11,8:19:8.99:198,9,0	0/0:18,0:25:11.97:0,12,488	0/0:28,0:26:20.72:0,21,819	0/0:17,0:16:4.19:0,4,21	0/0:14,0:16:19.78:0,20,898	0/0:17,0:18:39.13:0,39,1944	0/0:9,0:8:12.04:0,12,651	0/1:14,1:21:99:122,0,277	0/0:14,0:16:30.10:0,30,1416	1/1:11,6:18:21.07:647,21,0	0/0:15,0:16:27.09:0,27,1332	1/1:9,6:16:15.05:499,15,0	1/1:12,11:23:17.95:468,18,0	0/0:21,0:27:51.18:0,51,2438	1/1:19,4:21:10.86:286,11,0	1/1:11,10:24:24.55:745,25,0	./.	0/0:16,0:16:27.08:0,27,1295	0/0:11,0:15:9.50:0,10,124	0/0:17,0:24:28.02:0,28,437	0/0:18,0:19:27.09:0,27,1265	1/1:13,8:22:27.04:662,27,0	1/1:13,8:21:15.05:498,15,0	0/1:7,3:12:51.94:381,0,52
chr10	41178394	.	A	AT	6286.26	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-11.153;DP=492;FS=2.584;HRun=9;HaplotypeScore=48.2152;InbreedingCoeff=0.9920;MQ=83.58;MQ0=0;MQRankSum=-2.350;QD=27.33;ReadPosRankSum=-1.747;VQSLOD=4.4385;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:89.48:0,89,780	0/0:8,0:8:20.98:0,21,179	0/0:19,0:17:32.90:0,33,271	0/0:16,0:15:31.59:0,32,243	1/1:2,19:21:28.01:511,28,0	1/1:2,11:13:30.08:332,30,0	1/1:3,14:17:10.04:339,10,0	1/1:6,23:30:71.99:757,72,0	0/0:15,0:15:35.96:0,36,309	0/0:13,0:14:35.03:0,35,292	0/0:14,0:14:38.99:0,39,339	0/0:15,0:15:35.99:0,36,312	0/0:18,0:18:41.97:0,42,365	1/1:1,10:11:33.02:350,33,0	0/0:14,0:14:35.98:0,36,313	1/1:0,13:13:39.11:431,39,0	1/1:0,25:25:63.17:697,63,0	0/0:16,0:17:44.03:0,44,371	1/1:5,8:13:24.06:265,24,0	1/1:0,14:14:42.11:465,42,0	1/1:3,14:17:39.11:431,39,0	0/0:11,0:11:23.99:0,24,208	0/0:15,0:16:44.03:0,44,371	0/0:18,0:18:47.97:0,48,417	0/0:29,0:30:77.02:0,77,657	1/1:1,17:18:48.13:531,48,0	1/1:1,20:23:65.84:691,66,0	1/1:1,14:15:45.10:486,45,0
chr10	41178575	.	AGTGT	A	1775.16	PASS	AB=0.730;AC=30;AF=0.600;AN=50;BaseQRankSum=5.055;DP=391;FS=2.851;HRun=0;HaplotypeScore=79.6763;InbreedingCoeff=0.5881;MQ=62.58;MQ0=7;MQRankSum=-3.002;QD=8.11;ReadPosRankSum=2.970;VQSLOD=2.2450;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:15:5.77:0,6,116	0/0:5,0:4:3.01:0,3,51	./.	./.	1/1:20,0:25:8.97:76,9,0	1/1:14,0:20:9.01:84,9,0	0/1:13,0:20:14.67:72,0,15	0/0:21,0:21:9:0,9,119	1/1:4,9:13:27.09:401,27,0	1/1:11,0:11:3.01:44,3,0	1/1:6,1:8:6.01:75,6,0	1/1:6,0:15:18.02:168,18,0	1/1:5,7:12:15.05:233,15,0	1/1:11,0:16:18.02:167,18,0	0/0:8,0:11:8.23:0,8,37	1/1:5,0:12:18.02:165,18,0	1/1:11,0:14:8.75:68,9,0	1/1:11,0:11:2.98:47,3,0	0/0:9,0:9:9.03:0,9,202	0/0:11,0:11:14.62:0,15,295	0/0:15,0:13:15.01:0,15,242	1/1:6,1:8:6.01:75,6,0	1/1:5,0:8:6.01:56,6,0	1/1:3,0:10:2.84:28,3,0	0/1:9,5:13:23.88:196,0,24	0/0:17,0:17:15.10:0,15,286	0/0:17,0:17:15.03:0,15,286	./.
chr10	41179064	.	AC	A	13020.47	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=14.266;DP=599;FS=4.465;HRun=1;HaplotypeScore=56.9134;InbreedingCoeff=0.9995;MQ=82.20;MQ0=0;MQRankSum=-1.616;QD=39.34;ReadPosRankSum=1.870;VQSLOD=5.5335;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:75.26:0,75,1194	0/0:11,0:11:33.11:0,33,528	0/0:18,0:18:54.16:0,54,816	0/0:20,0:20:54.18:0,54,828	1/1:0,20:20:57.19:791,57,0	1/1:0,18:18:39.13:545,39,0	1/1:0,19:19:54.18:755,54,0	1/1:0,26:26:78.25:1073,78,0	0/0:29,0:29:87.30:0,87,1382	0/0:33,0:33:99:0,99,1516	0/0:33,0:33:99:0,99,1577	1/1:0,19:19:51.17:713,51,0	0/0:19,0:19:57.16:0,57,863	1/1:0,17:17:51.17:713,51,0	0/0:18,0:18:54.18:0,54,861	1/1:0,30:30:90.30:1259,90,0	1/1:0,24:24:72.24:1007,72,0	0/0:19,0:19:54.17:0,54,833	1/1:0,16:16:48.15:652,48,0	1/1:0,29:29:87.29:1212,87,0	1/1:0,15:15:42.14:587,42,0	0/0:24,0:24:72.25:0,72,1148	1/1:0,19:19:54.18:755,54,0	1/1:0,26:26:66.22:923,66,0	0/0:19,0:19:57.18:0,57,888	1/1:1,23:24:24.24:900,24,0	1/1:0,20:20:54.18:755,54,0	1/1:0,9:9:27.09:378,27,0
chr10	41179845	.	G	GA	2961.96	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-6.771;DP=626;FS=2.931;HRun=9;HaplotypeScore=77.6281;InbreedingCoeff=0.9749;MQ=81.88;MQ0=0;MQRankSum=-1.134;QD=23.89;ReadPosRankSum=0.967;VQSLOD=4.5005;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:88.12:0,88,879	0/0:12,0:12:32.99:0,33,286	0/0:33,0:30:19.24:0,19,362	0/0:20,0:21:6.45:0,6,217	0/0:26,0:27:80.01:0,80,679	0/0:25,0:26:74.02:0,74,631	0/0:20,0:20:44.94:0,45,383	0/0:25,0:25:41.94:0,42,364	0/0:22,0:22:47.87:0,48,407	1/1:5,26:31:78.19:852,78,0	1/1:7,16:25:47.80:493,48,0	0/0:18,0:18:41.97:0,42,362	0/0:28,0:28:65.96:0,66,573	0/0:20,0:20:50.97:0,51,439	1/1:1,22:23:60.16:663,60,0	0/0:14,0:14:41.98:0,42,361	0/0:35,0:35:86.94:0,87,750	1/1:2,16:18:45.12:498,45,0	0/0:19,0:19:47.99:0,48,417	0/0:28,0:28:80.98:0,81,703	0/0:11,0:11:29.99:0,30,260	0/0:16,0:17:47.03:0,47,397	0/0:26,0:26:74.98:0,75,649	0/0:15,0:15:41.99:0,42,364	1/1:7,20:27:57.15:631,57,0	0/0:28,2:30:28.24:0,28,621	0/0:9,0:9:26.99:0,27,234	0/0:9,0:9:20.97:0,21,182
chr10	41180880	.	GGT	G	2094.27	PASS	AB=0.709;AC=15;AF=0.288;AN=52;BaseQRankSum=-1.688;DP=613;FS=7.188;HRun=0;HaplotypeScore=105.1553;InbreedingCoeff=0.3981;MQ=67.28;MQ0=12;MQRankSum=6.518;QD=9.88;ReadPosRankSum=4.406;VQSLOD=2.7549;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:14,20:36:35.60:345,36,0	0/1:10,3:13:29.83:30,0,129	0/0:33,0:25:3.01:0,3,30	0/0:23,0:15:2.98:0,3,22	./.	0/0:21,0:18:5.67:0,6,35	0/0:29,0:28:10.30:0,10,112	0/0:29,0:26:35.95:0,36,263	0/1:9,11:20:17.23:223,0,17	0/1:22,14:35:0.80:392,0,1	1/1:10,7:18:7.87:156,8,0	0/0:27,0:27:14.93:0,15,153	0/1:8,9:20:10.32:278,0,10	0/0:16,0:14:3:0,3,25	1/1:7,11:18:18.05:202,18,0	0/0:11,0:16:9:0,9,77	0/0:25,0:22:14.91:0,15,113	1/1:3,11:15:29.92:317,30,0	0/0:15,0:15:17.80:0,18,125	./.	0/0:28,0:23:11.73:0,12,89	1/1:10,12:22:18.05:202,18,0	0/0:14,0:20:6:0,6,53	0/0:17,0:23:3:0,3,26	0/1:8,4:11:30.63:119,0,31	0/0:23,0:21:30.38:0,30,210	0/0:19,0:20:16.08:0,16,104	0/0:13,0:11:2.97:0,3,20
chr10	41181099	.	TATCTATCTATCTATCC	T	4098.21	PASS	AB=0.992;AC=20;AF=0.385;AN=52;BaseQRankSum=5.454;DP=617;FS=22.421;HRun=0;HaplotypeScore=190.4716;InbreedingCoeff=0.2973;MQ=43.55;MQ0=42;MQRankSum=-6.786;QD=15.01;ReadPosRankSum=-3.166;VQSLOD=0.6279;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:22:27.95:0,28,402	0/0:11,0:11:20.91:0,21,777	./.	0/0:12,0:3:8.99:0,9,168	./.	0/1:17,0:16:44.65:45,0,221	1/1:15,0:10:0.63:3,1,0	1/1:5,30:31:90.03:1565,90,0	0/0:31,0:31:69.22:0,69,3545	0/0:38,0:33:96.11:0,96,3872	0/0:22,0:20:39.13:0,39,2132	1/1:13,3:15:5.54:137,6,0	0/0:27,0:24:36.09:0,36,1739	1/1:17,2:16:0.38:66,0,0	0/0:33,0:29:60.21:0,60,3507	1/1:4,31:34:4.13:85,4,0	0/1:18,1:14:65.73:100,0,66	0/0:13,0:12:34.27:0,34,1306	0/1:19,0:15:96.70:550,0,97	1/1:29,0:22:11.75:189,12,0	1/1:15,0:10:3.01:98,3,0	0/0:32,0:29:54.03:0,54,2855	0/0:17,1:14:0:0,0,0	0/0:12,1:11:2.88:0,3,15	0/0:24,0:23:39.13:0,39,1992	0/1:25,0:18:57.80:763,0,58	0/1:17,0:15:44.55:413,0,45	0/1:12,0:10:85.94:86,0,87
chr10	41181103	.	TATCTATCTATCC	T	3195.47	PASS	AB=0.952;AC=19;AF=0.365;AN=52;BaseQRankSum=7.300;DP=613;FS=22.326;HRun=0;HaplotypeScore=167.0642;InbreedingCoeff=0.2655;MQ=43.38;MQ0=43;MQRankSum=-6.291;QD=12.06;ReadPosRankSum=-3.404;VQSLOD=0.5583;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:23:2.77:0,3,192	0/0:10,0:10:14.89:0,15,557	./.	0/0:15,0:4:2.17:0,2,105	./.	0/1:17,0:16:57.58:120,0,58	1/1:14,0:8:2.62:27,3,0	1/1:35,0:30:88.08:1073,88,0	0/0:30,0:30:66.21:0,66,2704	0/0:40,0:35:96.20:0,96,3012	0/0:23,0:21:39.13:0,39,1700	1/1:16,0:15:4.83:103,5,0	0/0:28,0:25:35.11:0,35,1450	0/1:22,0:19:1.25:40,0,1	0/0:32,0:28:60.21:0,60,2735	1/1:34,0:32:4.04:50,4,0	0/1:19,0:14:37.26:43,0,37	0/0:13,0:12:33.50:0,33,1014	0/1:17,0:13:45.75:450,0,46	1/1:25,0:20:11.79:160,12,0	1/1:13,0:8:3.01:98,3,0	0/0:32,0:30:54.05:0,54,2377	0/0:18,0:14:0:0,0,0	0/0:13,0:11:2.88:0,3,15	0/0:21,0:20:39.13:0,39,1649	0/1:24,0:18:7.03:750,0,7	0/1:17,0:15:26.46:356,0,26	0/1:6,6:10:63.26:86,0,63
chr10	41181111	.	TATCC	T	1926.35	PASS	AB=1.000;AC=27;AF=0.519;AN=52;BaseQRankSum=7.840;DP=632;FS=6.872;HRun=0;HaplotypeScore=141.8811;InbreedingCoeff=0.6315;MQ=43.26;MQ0=40;MQRankSum=-5.541;QD=6.23;ReadPosRankSum=-2.193;VQSLOD=1.6741;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:37,0:25:2.31:2,0,138	0/0:10,0:10:16.20:0,16,260	./.	0/0:23,0:4:2.11:0,2,43	./.	1/1:17,0:16:17.81:217,18,0	1/1:15,0:9:2.85:38,3,0	1/1:35,0:30:60.88:481,61,0	0/0:28,0:28:3.98:0,4,946	0/0:35,0:32:83.88:0,84,1189	0/0:23,0:22:39.12:0,39,741	1/1:16,0:15:2.63:47,3,0	0/0:28,0:25:35.07:0,35,613	1/1:25,0:22:0.40:19,0,0	0/0:31,0:28:60.19:0,60,1147	1/1:33,0:32:4.11:42,4,0	1/1:19,0:15:0.80:17,1,0	0/0:14,0:13:38.96:0,39,515	1/1:18,1:15:29.95:345,30,0	1/1:21,5:22:8.65:82,9,0	1/1:12,1:8:3.01:48,3,0	0/0:36,0:33:51.07:0,51,1039	0/0:22,0:18:0.47:0,0,1	0/0:11,1:10:2.88:0,3,15	0/0:22,0:22:42.04:0,42,765	1/1:23,0:19:16.99:444,17,0	1/1:14,4:16:12.02:281,12,0	1/1:12,0:10:2.52:37,3,0
chr10	41181128	.	ATCC	A	157.62	PASS	AB=0.944;AC=4;AF=0.074;AN=54;BaseQRankSum=4.759;DP=640;FS=1.984;HRun=0;HaplotypeScore=149.9134;InbreedingCoeff=0.1875;MQ=45.97;MQ0=34;MQRankSum=-4.360;QD=2.50;ReadPosRankSum=-2.773;VQSLOD=2.2445;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:24:17.63:0,18,456	0/0:10,0:10:15.28:0,15,271	./.	0/0:26,0:5:15.04:0,15,211	0/0:22,0:22:9.03:0,9,206	0/0:20,1:20:29.78:0,30,410	0/0:11,0:8:8.90:0,9,147	0/0:41,0:34:83.04:0,83,1377	0/0:28,0:28:46.11:0,46,955	0/0:33,0:32:63.03:0,63,1303	0/0:22,0:21:30.10:0,30,630	0/0:20,0:19:2.31:0,2,39	0/0:23,0:22:20.72:0,21,519	0/1:21,3:22:57.80:147,0,58	0/0:27,2:27:43.27:0,43,1131	0/0:34,0:33:23.48:0,23,188	1/1:20,0:15:4.93:90,5,0	0/0:18,0:15:40.28:0,40,648	0/0:16,0:13:23.48:0,23,509	0/0:30,0:26:11.97:0,12,199	0/0:10,1:8:3.01:0,3,33	0/0:30,0:29:39.05:0,39,796	0/0:27,0:23:3.37:0,3,59	0/0:15,1:14:3.61:0,4,11	0/0:29,0:29:36.58:0,37,721	0/0:21,0:19:43.46:0,43,515	0/1:19,0:18:22.23:22,0,230	0/0:8,0:7:2.97:0,3,20
chr10	41181131	.	CTCTATCTATCTA	C	1589.76	PASS	AB=0.809;AC=23;AF=0.460;AN=50;BaseQRankSum=-2.124;DP=643;FS=2.144;HRun=0;HaplotypeScore=199.8143;InbreedingCoeff=0.4719;MQ=46.51;MQ0=33;MQRankSum=-3.157;QD=5.05;ReadPosRankSum=0.964;VQSLOD=2.8974;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:23:15.05:0,15,382	0/1:4,0:10:1.09:1,0,5	./.	./.	0/0:21,0:21:12.04:0,12,604	1/1:13,9:21:5.96:121,6,0	0/1:12,0:9:0.13:0,0,0	./.	1/1:17,12:29:3.01:101,3,0	1/1:23,9:31:21.07:573,21,0	0/0:13,11:23:1.41:0,1,2	1/1:13,6:18:6.01:195,6,0	1/1:11,11:21:3.01:102,3,0	0/0:23,0:21:15.01:0,15,337	1/1:21,7:26:9.03:295,9,0	0/0:26,0:32:20.90:0,21,501	0/0:18,0:15:6.02:0,6,84	0/1:17,0:17:99:258,0,191	0/0:15,0:13:4.56:0,5,40	0/0:21,0:28:3.63:0,4,50	0/0:15,0:12:2.04:0,2,7	0/1:18,10:27:0:0,0,0	0/1:15,13:24:0.02:0,0,0	1/1:10,0:13:1.22:3,1,0	1/1:13,15:28:3.01:77,3,0	0/0:22,0:22:15.31:0,15,175	1/1:14,0:22:3.11:8,3,0	0/0:9,0:8:3.01:0,3,75
chr10	41182680	.	C	CTT	2352.96	PASS	AB=0.900;AC=15;AF=0.268;AN=56;BaseQRankSum=4.562;DP=598;FS=0.379;HRun=9;HaplotypeScore=78.5112;InbreedingCoeff=0.9262;MQ=82.06;MQ0=0;MQRankSum=-3.509;QD=14.52;ReadPosRankSum=2.317;VQSLOD=1.3242;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:69.15:0,69,734	0/1:8,0:9:1.30:1,0,199	0/0:21,0:21:47.65:0,48,449	0/0:19,0:19:39.03:0,39,388	1/1:5,0:30:34.72:217,35,0	0/0:24,0:25:68.87:0,69,705	0/0:23,0:24:57.09:0,57,662	0/0:32,0:31:75.16:0,75,798	0/0:23,0:23:63.13:0,63,659	0/0:29,0:29:66.13:0,66,703	0/0:20,0:20:57.09:0,57,590	1/1:4,19:23:51.17:785,51,0	0/0:25,0:25:63.08:0,63,654	1/1:2,0:19:6.01:88,6,0	0/0:20,0:20:54.11:0,54,574	1/1:2,0:21:37.43:129,37,0	1/1:3,0:22:42.42:145,42,0	0/0:10,0:10:24.06:0,24,255	0/0:19,0:19:35.99:0,36,367	0/0:23,0:23:63.14:0,63,663	0/0:13,0:13:36.09:0,36,383	0/0:23,0:23:63.15:0,63,668	1/1:2,14:18:28.74:373,29,0	1/1:1,18:20:56.64:808,57,0	0/0:21,0:21:60.15:0,60,638	0/0:22,0:23:48.04:0,48,566	0/0:31,0:31:81.17:0,81,861	0/0:10,0:10:21.05:0,21,224
chr10	41182786	.	GAA	G	7516.17	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=14.237;DP=721;FS=1.055;HRun=2;HaplotypeScore=83.4988;InbreedingCoeff=0.9935;MQ=87.11;MQ0=2;MQRankSum=-3.776;QD=41.76;ReadPosRankSum=3.119;VQSLOD=4.9859;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,38:36:93.32:1517,93,0	0/0:13,0:13:39.13:0,39,793	0/0:22,0:22:65.89:0,66,1276	0/0:26,0:26:75.18:0,75,1361	1/1:0,29:29:78.18:1215,78,0	0/0:28,0:28:84.29:0,84,1707	0/0:18,0:18:54.19:0,54,1088	0/0:24,0:23:72.25:0,72,1426	0/0:25,0:25:75.24:0,75,1488	0/0:33,0:33:99:0,99,1988	0/0:26,0:26:72.20:0,72,1412	0/0:29,0:29:87.30:0,87,1760	0/0:26,0:26:78.25:0,78,1528	1/1:0,27:27:60.20:979,60,0	0/0:23,0:23:69.24:0,69,1402	1/1:1,30:31:26.32:1310,26,0	1/1:0,28:28:81.28:1321,81,0	0/0:17,0:17:51.18:0,51,1036	0/0:24,0:24:72.25:0,72,1457	0/0:27,0:27:81.26:0,81,1592	0/0:36,0:36:99:0,108,2155	0/0:24,0:24:72.25:0,72,1463	0/0:37,0:37:99:0,108,2194	0/0:31,0:31:93.30:0,93,1838	1/1:0,27:27:72.25:1175,72,0	0/0:32,0:32:96.33:0,96,1951	0/0:16,0:16:48.16:0,48,949	0/0:4,0:4:12.04:0,12,244
chr10	41184457	.	ATGTGTGTGTGTGTG	A	103.03	PASS	AB=0.743;AC=3;AF=0.058;AN=52;BaseQRankSum=5.133;DP=476;FS=5.459;HRun=0;HaplotypeScore=156.2096;InbreedingCoeff=0.2711;MQ=68.63;MQ0=12;MQRankSum=-4.694;QD=2.34;ReadPosRankSum=-3.395;VQSLOD=1.5498;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:11.06:0,11,206	0/0:11,0:11:3.46:0,3,430	./.	./.	0/0:9,0:9:12.04:0,12,483	1/1:11,6:18:5.91:114,6,0	0/1:17,9:26:13.47:82,0,13	0/0:30,0:29:24.08:0,24,431	0/0:8,0:8:21.05:0,21,848	0/0:15,0:15:28.86:0,29,1076	0/0:6,0:6:3.89:0,4,333	0/0:12,0:12:12.04:0,12,597	0/0:13,0:14:18.03:0,18,651	0/0:15,0:14:6:0,6,73	0/0:11,0:11:18.75:0,19,1143	0/0:10,0:12:9.03:0,9,385	0/0:27,0:30:44.52:0,45,1323	0/0:20,0:19:45.15:0,45,2127	0/0:10,0:11:6.02:0,6,358	0/0:17,0:16:18:0,18,716	0/0:46,0:47:70.03:0,70,3327	0/0:9,0:9:9.03:0,9,465	0/0:9,0:8:6.02:0,6,301	0/0:19,0:31:15.05:0,15,465	0/0:11,0:13:9.03:0,9,493	0/0:12,0:12:15.05:0,15,710	0/0:3,0:10:9.61:0,10,318	0/0:7,0:7:7.48:0,7,436
chr10	41186306	.	TTG	T	2250.39	PASS	AB=0.852;AC=29;AF=0.537;AN=54;BaseQRankSum=-0.179;DP=539;FS=0.574;HRun=0;HaplotypeScore=86.0506;InbreedingCoeff=0.5895;MQ=57.52;MQ0=6;MQRankSum=1.127;QD=7.40;ReadPosRankSum=4.184;VQSLOD=3.2344;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:37:20.98:0,21,179	0/1:5,0:5:18.34:18,0,35	./.	0/0:23,0:17:0.47:0,0,1	1/1:10,0:21:19.89:98,20,0	1/1:6,8:16:23.73:226,24,0	0/1:16,11:27:51.87:114,0,52	0/0:20,0:17:2.96:0,3,19	1/1:5,15:21:26.91:277,27,0	1/1:7,9:16:14.08:247,14,0	1/1:4,3:7:8.85:80,9,0	0/0:6,0:12:9:0,9,77	1/1:7,10:17:20.96:196,21,0	1/1:4,0:16:22.66:111,23,0	0/1:7,8:15:25.16:147,0,25	1/1:13,0:30:34.09:168,34,0	1/1:15,2:31:31.58:192,32,0	1/1:3,8:14:23.89:237,24,0	0/0:16,0:16:18:0,18,220	0/1:10,1:21:0.05:0,0,233	0/0:14,0:22:17.84:0,18,145	1/1:8,3:11:9.02:99,9,0	0/0:8,0:16:11.74:0,12,102	0/0:15,0:27:45.02:0,45,448	1/1:8,10:17:21.05:231,21,0	0/1:9,1:16:6.19:6,0,186	0/0:12,0:15:20.97:0,21,202	0/0:8,0:18:20.97:0,21,177
chr10	41186575	.	TTCTCTC	T	501.71	PASS	AB=0.956;AC=14;AF=0.280;AN=50;BaseQRankSum=1.653;DP=469;FS=2.986;HRun=0;HaplotypeScore=101.9343;InbreedingCoeff=0.2381;MQ=62.37;MQ0=15;MQRankSum=-3.823;QD=2.79;ReadPosRankSum=0.345;VQSLOD=2.0583;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:22:17.96:0,18,233	0/0:7,0:8:3.01:0,3,78	./.	./.	0/1:24,0:26:8.97:9,0,62	0/1:15,0:15:0.05:0,0,0	0/0:19,0:19:25.14:0,25,292	0/0:23,0:21:2.03:0,2,5	0/0:10,0:11:6.01:0,6,63	0/1:25,0:24:0.03:0,0,112	0/0:15,0:15:13.15:0,13,92	1/1:12,0:13:9.50:120,10,0	0/0:18,0:17:21.40:0,21,319	1/1:11,0:11:0.82:58,1,0	0/0:6,0:10:0:0,0,0	0/1:13,4:16:26.14:196,0,26	1/1:19,5:24:1.48:58,1,0	0/1:21,0:20:6.86:7,0,78	0/0:16,0:15:3.01:0,3,38	0/0:18,0:17:6.01:0,6,116	0/0:13,0:12:6.01:0,6,119	./.	0/1:12,0:12:21.90:22,0,27	1/1:13,1:14:9.03:163,9,0	0/0:21,0:21:2.12:0,2,23	0/0:17,0:15:8.94:0,9,85	0/0:19,0:19:14.08:0,14,301	0/0:8,0:6:12.03:0,12,251
chr10	41186620	.	T	TC	290.56	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-0.149;DP=448;FS=1.188;HRun=1;HaplotypeScore=65.9593;InbreedingCoeff=0.8361;MQ=50.58;MQ0=39;MQRankSum=0.072;QD=7.26;ReadPosRankSum=-2.127;VQSLOD=-0.0517;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:25:51.36:0,51,601	0/0:3,0:3:5.38:0,5,45	0/0:15,0:6:12:0,12,119	0/0:34,0:6:14.66:0,15,152	0/0:18,0:17:36.09:0,36,441	1/1:0,18:13:5.88:55,6,0	1/1:8,14:18:24.04:346,24,0	0/0:21,0:18:40.11:0,40,543	0/0:7,0:5:14.98:0,15,166	0/0:15,0:13:37.61:0,38,428	0/0:9,0:9:20.16:0,20,246	0/0:14,0:13:28.23:0,28,278	0/0:19,0:18:48.16:0,48,550	0/0:10,0:10:26.81:0,27,295	0/0:10,0:10:15.02:0,15,190	0/0:15,0:14:35.28:0,35,365	0/0:24,0:23:43.76:0,44,473	0/0:22,0:19:50.10:0,50,578	0/0:13,0:12:33.05:0,33,401	0/0:20,0:18:45.13:0,45,549	0/0:16,0:14:24.08:0,24,305	0/0:9,0:9:17.84:0,18,228	0/0:20,0:20:41.30:0,41,479	0/0:17,0:18:35.77:0,36,377	0/0:12,0:12:29.96:0,30,358	0/0:15,0:11:31.62:0,32,366	0/0:13,0:12:32.56:0,33,364	0/0:7,0:6:18.06:0,18,230
chr10	41186846	.	T	TA	2248.99	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=3.415;DP=533;FS=0.501;HRun=4;HaplotypeScore=55.3436;InbreedingCoeff=0.9971;MQ=66.88;MQ0=1;MQRankSum=0.728;QD=29.21;ReadPosRankSum=1.524;VQSLOD=3.3883;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,126,1416	0/0:13,0:13:33.08:0,33,364	0/0:21,0:20:31.39:0,31,399	0/0:14,0:11:20.01:0,20,208	0/0:26,0:26:78.21:0,78,874	1/1:2,19:21:48.16:647,48,0	1/1:2,13:15:33.07:423,33,0	0/0:31,0:31:69.88:0,70,745	0/0:20,0:20:54.15:0,54,609	0/0:23,0:23:69.19:0,69,774	0/0:16,0:16:48.14:0,48,544	1/1:2,8:10:21.07:287,21,0	0/0:21,0:21:63.16:0,63,704	0/0:14,0:14:39.11:0,39,442	0/0:17,0:17:51.15:0,51,578	0/0:14,0:14:39.11:0,39,442	0/0:21,0:21:57.15:0,57,636	0/0:15,0:15:39.09:0,39,429	0/0:14,0:14:39.07:0,39,414	0/0:24,0:24:69.20:0,69,783	0/0:18,0:18:48.12:0,48,533	0/0:9,0:9:27.08:0,27,306	1/1:1,15:16:39.13:534,39,0	1/1:0,15:15:39.13:534,39,0	0/0:28,0:28:78.21:0,78,875	0/0:23,0:23:63.18:0,63,715	0/0:18,0:18:51.14:0,51,577	0/0:10,0:10:27.08:0,27,305
chr10	41187108	.	GCACACACA	G	369.98	PASS	AC=8;AF=0.222;AN=36;BaseQRankSum=2.785;DP=447;FS=14.926;HRun=0;HaplotypeScore=104.0155;InbreedingCoeff=0.5159;MQ=69.48;MQ0=15;MQRankSum=-2.202;QD=6.73;ReadPosRankSum=0.551;VQSLOD=1.2892;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:9,0:9:9.03:0,9,285	./.	./.	0/0:10,0:9:3.01:0,3,62	1/1:14,0:18:3.01:56,3,0	./.	0/0:16,0:16:0:0,0,0	0/0:14,0:13:12.04:0,12,336	./.	1/1:8,0:8:6.02:104,6,0	./.	0/0:20,0:20:12.40:0,12,336	0/0:12,0:13:9.03:0,9,203	1/1:12,4:15:6.02:146,6,0	0/0:13,0:13:9.03:0,9,209	0/0:22,0:21:6.02:0,6,131	0/0:17,0:15:3.48:0,3,70	0/0:15,0:15:9:0,9,126	./.	0/0:22,0:21:3.01:0,3,69	0/0:10,0:10:9.01:0,9,224	./.	./.	1/1:10,0:13:11.78:180,12,0	./.	0/0:14,0:13:3.01:0,3,42	0/0:7,0:7:3.01:0,3,41
chr10	41187602	.	GTGTA	G	1912.64	PASS	AB=0.868;AC=13;AF=0.250;AN=52;BaseQRankSum=9.121;DP=864;FS=3.261;HRun=0;HaplotypeScore=138.1593;InbreedingCoeff=0.6803;MQ=71.94;MQ0=5;MQRankSum=2.953;QD=9.24;ReadPosRankSum=1.755;VQSLOD=2.9678;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:45:45.15:0,45,782	0/0:16,0:16:36.12:0,36,824	./.	./.	1/1:10,11:21:29.73:376,30,0	1/1:7,0:20:15.01:137,15,0	0/1:17,0:28:27.88:66,0,28	0/0:40,0:40:28.32:0,28,514	0/1:29,2:31:39.04:39,0,1013	0/0:37,1:38:20.86:0,21,1383	0/1:17,1:18:1.46:1,0,904	0/0:16,0:45:15.04:0,15,230	0/0:37,0:37:66.23:0,66,1547	1/1:13,14:27:32.14:472,32,0	0/0:40,2:42:19.61:0,20,1421	1/1:20,14:34:23.69:372,24,0	1/1:13,15:28:41.87:624,42,0	0/0:28,0:28:30.57:0,31,673	0/0:17,0:15:18.06:0,18,397	0/0:27,0:27:57.20:0,57,1292	0/0:45,1:48:22.62:0,23,1458	0/0:27,0:27:54.17:0,54,1218	0/0:7,0:27:12.02:0,12,189	0/0:24,0:36:3.01:0,3,44	0/0:34,0:34:60.21:0,60,1390	0/0:32,0:32:37.72:0,38,979	0/0:19,0:19:36.12:0,36,846	0/0:25,1:26:13.62:0,14,1291
chr10	41190284	.	ATGTACGTG	A	857.90	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=6.432;DP=554;FS=24.897;HRun=0;HaplotypeScore=152.5515;InbreedingCoeff=0.8404;MQ=70.39;MQ0=12;MQRankSum=-3.801;QD=7.46;ReadPosRankSum=-0.677;VQSLOD=0.3506;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:75.22:0,75,1561	0/0:9,0:9:27.09:0,27,749	0/0:29,0:17:44.94:0,45,701	0/0:38,0:26:37.93:0,38,905	0/0:15,0:15:42.11:0,42,689	1/1:23,0:25:14.57:163,15,0	1/1:9,0:18:11.42:134,11,0	0/0:20,0:20:60.06:0,60,924	0/0:10,0:10:27.09:0,27,708	0/0:20,0:20:60.07:0,60,1085	0/0:16,0:16:30.10:0,30,947	1/1:3,15:20:11.09:292,11,0	0/0:15,0:14:30.10:0,30,802	0/0:18,0:17:44.69:0,45,841	0/0:25,0:25:51.25:0,51,1648	0/0:18,0:17:42.13:0,42,789	0/0:29,0:29:70.91:0,71,1278	0/0:20,0:20:43.17:0,43,916	0/0:12,0:12:35.06:0,35,578	0/1:12,0:12:7.26:7,0,299	0/0:26,0:26:58.13:0,58,897	0/0:13,0:13:29.87:0,30,510	1/1:1,14:15:9.33:254,9,0	1/1:1,24:25:5.74:169,6,0	0/0:14,0:13:21.05:0,21,556	0/0:20,0:20:57.09:0,57,1009	0/0:32,0:32:87.24:0,87,1622	0/0:10,0:8:24.08:0,24,331
chr10	41190287	.	TAC	T	296.02	PASS	AB=0.967;AC=13;AF=0.232;AN=56;BaseQRankSum=7.038;DP=550;FS=44.459;HRun=0;HaplotypeScore=99.3206;InbreedingCoeff=0.6578;MQ=66.90;MQ0=16;MQRankSum=-2.447;QD=1.89;ReadPosRankSum=-3.045;VQSLOD=-0.4254;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:36.81:0,37,985	0/0:9,0:9:27.09:0,27,479	0/0:28,0:16:44.94:0,45,701	0/0:35,0:23:37.93:0,38,905	0/0:16,0:16:40.65:0,41,557	1/1:25,0:25:14.14:79,14,0	1/1:17,0:17:11.26:50,11,0	0/0:22,0:21:62.85:0,63,908	0/0:10,0:10:23.91:0,24,371	0/1:19,1:20:0.32:0,0,784	0/0:15,0:15:30.10:0,30,475	1/1:19,1:19:11.67:90,12,0	0/1:17,0:16:94.69:95,0,363	0/1:18,1:18:28.47:28,0,326	0/0:25,0:25:52.45:0,52,934	0/0:18,0:17:41.29:0,41,439	0/0:27,0:27:32.02:0,32,650	0/0:19,0:18:24.08:0,24,570	0/0:13,0:12:35.22:0,35,471	0/0:11,0:11:29.68:0,30,375	0/0:27,0:26:53.29:0,53,760	0/0:14,0:14:7.94:0,8,371	1/1:14,0:14:8.92:72,9,0	1/1:24,1:25:5.79:48,6,0	0/0:13,0:12:21.05:0,21,291	0/0:20,0:20:9.19:0,9,726	0/0:31,1:32:24.70:0,25,973	0/0:10,0:8:24.07:0,24,323
chr10	41190289	.	CGT	C	1287.17	PASS	AB=0.934;AC=31;AF=0.596;AN=52;BaseQRankSum=3.642;DP=582;FS=13.362;HRun=0;HaplotypeScore=101.1160;InbreedingCoeff=0.3508;MQ=62.86;MQ0=20;MQRankSum=-0.545;QD=3.26;ReadPosRankSum=2.347;VQSLOD=1.5486;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:35,1:36:28.58:29,0,379	0/0:8,0:8:12.03:0,12,158	./.	./.	0/1:14,3:17:13.97:27,0,14	1/1:24,0:24:5.68:28,6,0	1/1:18,0:17:5.68:28,6,0	0/1:26,0:23:3.16:14,0,3	0/0:13,0:14:16.30:0,16,213	0/0:20,0:23:16.43:0,16,108	0/0:10,0:17:12.02:0,12,135	1/1:21,0:19:10.89:51,11,0	0/1:12,3:16:10.33:10,0,137	1/1:12,5:18:15.91:167,16,0	0/0:19,0:30:9.79:0,10,183	1/1:10,8:18:17.67:176,18,0	1/1:19,8:27:32.92:335,33,0	0/0:21,0:20:17.63:0,18,138	1/1:9,2:10:5.99:54,6,0	1/1:9,0:12:8.52:42,9,0	1/1:27,2:29:8.44:79,8,0	0/1:10,2:13:23.53:24,0,53	0/1:15,0:15:13.51:30,0,14	0/1:26,0:26:15.45:19,0,15	0/0:5,0:14:6:0,6,52	1/1:15,7:22:12.02:125,12,0	1/1:25,7:32:20.88:203,21,0	1/1:8,0:8:5.68:28,6,0
chr10	41191561	.	G	GA	1254.68	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=4.781;DP=683;FS=7.543;HRun=7;HaplotypeScore=71.0690;InbreedingCoeff=0.9987;MQ=66.02;MQ0=0;MQRankSum=-3.902;QD=27.88;ReadPosRankSum=1.192;VQSLOD=4.3394;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:81.10:0,81,775	0/0:10,0:10:24.04:0,24,232	0/0:18,0:18:47.90:0,48,445	0/0:21,0:20:56.46:0,56,529	0/0:27,0:27:72.11:0,72,695	1/1:3,28:31:81.25:978,81,0	1/1:2,12:14:33.10:399,33,0	0/0:28,0:28:63.08:0,63,608	0/0:34,0:34:87.13:0,87,840	0/0:38,0:38:96.15:0,96,927	0/0:23,0:23:54.08:0,54,521	0/0:16,0:16:45.05:0,45,428	0/0:26,0:26:72.09:0,72,688	0/0:24,0:24:63.09:0,63,603	0/0:29,0:29:81.12:0,81,782	0/0:21,0:21:60.08:0,60,574	0/0:30,0:30:84.08:0,84,802	0/0:15,0:15:39.06:0,39,377	0/0:19,0:19:45.07:0,45,434	0/0:22,0:22:66.11:0,66,637	0/0:24,0:24:69.11:0,69,666	0/0:34,0:34:84.13:0,84,811	0/0:23,0:23:63.10:0,63,608	0/0:23,0:23:66.06:0,66,627	0/0:23,0:23:51.07:0,51,493	0/0:25,0:25:72.12:0,72,695	0/0:37,0:37:84.12:0,84,811	0/0:17,0:17:48.08:0,48,464
chr10	41192894	.	AT	A	698.33	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=6.681;DP=545;FS=3.267;HRun=9;HaplotypeScore=60.8012;InbreedingCoeff=0.9460;MQ=65.48;MQ0=1;MQRankSum=-1.243;QD=16.24;ReadPosRankSum=0.736;VQSLOD=3.9016;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:34:65.66:0,66,362	0/0:7,0:7:21.06:0,21,242	0/0:9,0:8:14.91:0,15,154	0/0:10,0:10:7.50:0,8,153	0/0:23,0:23:60.16:0,60,682	0/0:19,0:19:45.13:0,45,519	0/0:15,0:15:17.91:0,18,363	0/0:26,0:27:62.97:0,63,690	0/0:21,0:21:54.16:0,54,623	0/0:21,0:21:60.17:0,60,685	0/0:22,0:22:60.18:0,60,692	1/1:5,9:14:15.24:207,15,0	0/0:19,0:19:45.13:0,45,519	0/0:18,0:18:54.15:0,54,614	0/0:21,0:21:60.18:0,60,692	0/0:23,0:23:66.20:0,66,762	0/0:24,0:24:72.17:0,72,806	0/0:21,0:21:51.15:0,51,588	0/0:30,0:30:81.24:0,81,935	0/0:29,0:29:78.22:0,78,890	0/0:11,0:11:30.08:0,30,337	0/0:11,0:11:33.10:0,33,381	1/1:0,16:16:45.02:412,45,0	1/1:3,10:13:24:220,24,0	0/0:22,0:22:66.14:0,66,724	0/0:20,0:20:57.17:0,57,658	0/0:40,0:40:99:0,111,1263	0/0:5,0:5:12.04:0,12,138
chr10	41193273	.	CTG	C	2392.67	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=10.302;DP=699;FS=6.583;HRun=0;HaplotypeScore=79.5043;InbreedingCoeff=0.9999;MQ=87.74;MQ0=0;MQRankSum=-2.317;QD=36.81;ReadPosRankSum=2.186;VQSLOD=6.0362;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,132,2399	0/0:11,0:11:33.11:0,33,598	0/0:32,0:32:78.93:0,79,1519	0/0:26,0:26:78.27:0,78,1297	0/0:26,0:26:75.26:0,75,1367	0/0:24,0:24:66.23:0,66,1204	0/0:26,0:26:78.25:0,78,1381	0/0:30,0:30:84.29:0,84,1533	0/0:25,0:25:69.19:0,69,1173	0/0:29,0:29:87.29:0,87,1564	0/0:21,0:21:63.22:0,63,1143	1/1:1,32:33:90.30:1290,90,0	0/0:22,0:22:63.22:0,63,1147	0/0:21,0:21:63.22:0,63,1150	0/0:35,0:35:99:0,102,1832	0/0:21,0:21:57.20:0,57,1028	0/0:26,0:26:69.22:0,69,1225	0/0:19,0:19:54.19:0,54,986	0/0:27,0:27:81.23:0,81,1388	0/0:30,0:30:84.29:0,84,1526	0/0:19,0:19:54.17:0,54,952	0/0:26,0:26:75.24:0,75,1331	1/1:2,15:17:45.15:644,45,0	1/1:0,15:15:42.14:602,42,0	0/0:21,0:21:60.21:0,60,1100	0/0:22,0:22:63.22:0,63,1144	0/0:23,0:23:69.23:0,69,1225	0/0:22,0:22:63.22:0,63,1124
chr10	41193366	.	TG	T	1850.71	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.835;DP=739;FS=10.066;HRun=1;HaplotypeScore=72.0267;InbreedingCoeff=0.9994;MQ=89.81;MQ0=0;MQRankSum=-3.612;QD=34.92;ReadPosRankSum=0.146;VQSLOD=2.7879;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:49:99:0,147,2294	0/0:9,0:9:27.08:0,27,409	0/0:29,0:29:87.27:0,87,1331	0/0:30,0:30:87.27:0,87,1327	0/0:24,0:24:72.25:0,72,1148	1/1:0,24:24:69.23:965,69,0	1/1:0,29:29:72.24:1007,72,0	0/0:27,0:27:81.28:0,81,1290	0/0:26,0:26:78.25:0,78,1219	0/0:32,0:32:96.33:0,96,1513	0/0:27,0:27:77.52:0,78,1234	0/0:27,0:27:81.25:0,81,1249	0/0:17,0:17:51.17:0,51,806	0/0:28,0:28:84.29:0,84,1332	0/0:25,0:25:75.22:0,75,1151	0/0:22,0:22:66.22:0,66,1050	0/0:27,0:27:81.28:0,81,1288	0/0:25,0:25:72.25:0,72,1145	0/0:28,0:28:84.28:0,84,1320	0/0:36,0:36:99:0,108,1699	0/0:23,0:23:69.24:0,69,1103	0/0:29,0:29:87.28:0,87,1364	0/0:26,0:26:75.26:0,75,1197	0/0:16,0:16:39.12:0,39,624	0/0:22,0:22:66.22:0,66,1048	0/0:31,0:31:93.31:0,93,1465	0/0:36,0:36:99:0,108,1722	0/0:14,0:14:42.14:0,42,671
chr10	41193575	.	T	TG	1419.08	PASS	AB=0.761;AC=6;AF=0.107;AN=56;BaseQRankSum=1.357;DP=609;FS=8.293;HRun=9;HaplotypeScore=70.8747;InbreedingCoeff=0.6595;MQ=77.85;MQ0=0;MQRankSum=-0.289;QD=17.74;ReadPosRankSum=-1.215;VQSLOD=3.0599;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:68.96:0,69,593	0/0:9,0:9:20.99:0,21,182	0/0:21,0:21:26.89:0,27,319	0/0:16,0:16:11.86:0,12,257	0/0:20,0:20:41.97:0,42,364	1/1:3,23:26:60.16:663,60,0	0/1:7,13:20:31.16:353,0,31	0/0:27,2:29:38.78:0,39,563	0/0:20,0:20:56.99:0,57,495	0/0:26,0:26:53.98:0,54,468	0/0:12,0:12:32.99:0,33,286	0/0:24,0:24:59.97:0,60,517	1/1:4,19:23:48.13:531,48,0	0/0:19,0:19:53.95:0,54,459	0/0:21,0:21:59.95:0,60,514	0/0:27,0:27:68.96:0,69,595	0/0:23,0:23:50.94:0,51,439	0/0:13,0:13:23.96:0,24,202	0/0:32,0:32:68.96:0,69,596	0/0:19,2:21:20.81:0,21,409	0/0:30,0:30:71.96:0,72,621	0/0:17,0:17:50.99:0,51,443	0/0:27,0:28:68.02:0,68,579	0/0:14,0:14:35.89:0,36,302	0/0:15,0:15:32.99:0,33,286	0/0:29,0:29:74.95:0,75,646	0/0:34,1:35:56.79:0,57,722	0/1:10,1:11:3.18:3,0,204
chr10	41193935	.	C	CG	1674.59	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-7.348;DP=721;FS=15.249;HRun=1;HaplotypeScore=73.7801;InbreedingCoeff=0.9915;MQ=79.19;MQ0=0;MQRankSum=-1.220;QD=36.40;ReadPosRankSum=1.833;VQSLOD=2.3911;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:59,0:59:99:0,168,2124	0/0:5,0:5:15.05:0,15,194	0/0:18,0:18:50.70:0,51,661	0/0:25,0:25:65.94:0,66,747	0/0:26,0:26:71.92:0,72,839	1/1:1,23:24:57.19:854,57,0	1/1:0,22:22:63.21:943,63,0	0/0:20,0:20:57.13:0,57,697	0/0:16,0:16:47.52:0,48,590	0/0:36,0:36:95.99:0,96,1155	0/0:20,0:20:57.14:0,57,690	0/0:32,0:32:96.27:0,96,1204	0/0:24,0:24:69.16:0,69,849	0/0:33,0:33:99:0,99,1280	0/0:23,0:23:66.17:0,66,834	0/0:28,0:28:84.26:0,84,1076	0/0:26,0:26:78.24:0,78,998	0/0:38,0:38:99:0,111,1439	0/0:12,0:12:36.12:0,36,467	0/0:24,0:24:72.21:0,72,906	0/0:51,0:51:99:0,144,1772	0/0:28,0:28:84.19:0,84,1025	0/0:22,0:22:60.11:0,60,716	0/0:30,0:30:87.28:0,87,1129	0/0:13,0:12:39.13:0,39,506	0/0:34,0:34:99:0,99,1224	0/0:22,0:22:66.05:0,66,830	0/0:10,0:10:30.08:0,30,374
chr10	41194508	.	CT	C	3635.97	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=10.284;DP=694;FS=1.308;HRun=2;HaplotypeScore=66.0023;InbreedingCoeff=0.9997;MQ=85.36;MQ0=0;MQRankSum=-2.104;QD=34.63;ReadPosRankSum=2.971;VQSLOD=4.0707;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,150,2180	0/0:15,0:15:45.14:0,45,654	0/0:28,0:28:44.14:0,44,1056	0/0:20,0:20:44.25:0,44,541	1/1:0,28:28:81.20:1027,81,0	0/0:25,0:25:75.25:0,75,1122	0/0:19,0:19:57.19:0,57,853	0/0:28,0:28:75.24:0,75,1090	0/0:25,0:25:75.23:0,75,1086	0/0:33,0:33:99:0,99,1467	0/0:15,0:15:45.12:0,45,618	0/0:26,0:26:75.23:0,75,1086	0/0:30,0:30:90.25:0,90,1284	1/1:0,24:24:63.20:817,63,0	0/0:40,0:40:99:0,120,1759	1/1:0,25:25:69.22:896,69,0	1/1:1,27:28:69.22:895,69,0	0/0:13,0:13:39.09:0,39,554	0/0:19,0:19:57.16:0,57,812	0/0:24,0:24:72.23:0,72,1059	0/0:23,0:23:69.23:0,69,1033	0/0:24,0:24:72.20:0,72,1000	0/0:24,0:24:72.20:0,72,1011	0/0:21,0:21:63.21:0,63,940	0/0:31,0:31:93.30:0,93,1355	0/0:21,0:21:63.20:0,63,909	0/0:25,0:25:72.21:0,72,1034	0/0:10,0:10:27.56:0,28,402
chr10	41195879	.	A	AT	2036	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-10.378;DP=629;FS=3.905;HRun=6;HaplotypeScore=58.8589;InbreedingCoeff=0.9936;MQ=82.77;MQ0=0;MQRankSum=-1.748;QD=27.89;ReadPosRankSum=2.759;VQSLOD=4.4305;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,102,1021	0/0:8,0:8:24.05:0,24,244	0/0:14,0:14:38.34:0,38,335	0/0:22,0:22:52.92:0,53,520	0/0:28,0:28:81.15:0,81,813	0/0:18,0:18:48.09:0,48,482	0/0:16,0:16:45.06:0,45,442	0/0:37,0:37:87.17:0,87,878	0/0:22,0:22:66.15:0,66,673	0/0:25,0:25:69.16:0,69,704	0/0:23,0:23:66.14:0,66,673	1/1:2,24:26:60.19:745,60,0	0/0:21,0:21:54.12:0,54,551	0/0:14,0:14:42.10:0,42,428	0/0:19,0:19:51.07:0,51,501	0/0:27,0:27:78.17:0,78,796	0/0:18,0:18:51.09:0,51,513	0/0:21,0:21:63.10:0,63,631	0/0:16,0:16:45.10:0,45,459	0/0:30,0:30:84.19:0,84,856	0/0:17,0:17:51.10:0,51,512	0/0:22,0:22:66.12:0,66,664	1/1:1,23:24:60.19:755,60,0	1/1:3,20:23:54.17:679,54,0	0/0:23,0:23:66.14:0,66,668	0/0:41,0:41:99:0,117,1186	0/0:31,0:31:84.18:0,84,856	0/0:6,0:6:15.03:0,15,153
chr10	41196744	.	TAC	T	461.11	PASS	AB=0.735;AC=20;AF=0.417;AN=48;BaseQRankSum=1.095;DP=432;FS=0.939;HRun=0;HaplotypeScore=77.6742;InbreedingCoeff=0.5576;MQ=63.98;MQ0=6;MQRankSum=0.437;QD=2.90;ReadPosRankSum=1.753;VQSLOD=1.7732;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:19:13.81:0,14,120	0/0:2,0:3:5.80:0,6,39	./.	./.	0/1:10,0:16:0.30:0,0,0	1/1:9,0:17:17.04:84,17,0	./.	0/0:28,0:28:0.89:0,1,2	1/1:9,2:11:6.02:64,6,0	1/1:10,0:9:5.03:46,5,0	1/1:10,4:14:3:32,3,0	0/0:21,0:20:8.99:0,9,76	1/1:15,0:14:5.90:59,6,0	./.	1/1:9,2:12:12.03:124,12,0	1/1:8,0:11:2.84:14,3,0	1/1:9,0:13:8.35:42,8,0	0/1:17,8:26:19.64:123,0,20	0/0:10,0:10:2.98:0,3,21	0/0:14,0:16:6.58:0,7,63	0/0:27,0:27:17.99:0,18,164	0/0:11,0:11:9.03:0,9,132	0/0:7,0:10:2.38:0,2,12	0/0:9,0:9:5.99:0,6,49	1/1:8,5:13:3.01:32,3,0	0/0:22,0:22:17.99:0,18,165	0/0:18,0:20:17.91:0,18,143	0/0:3,0:7:9.01:0,9,96
chr10	41197006	.	TTC	T	1247.54	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.891;DP=497;FS=3.464;HRun=0;HaplotypeScore=97.0307;InbreedingCoeff=0.9474;MQ=76.08;MQ0=1;MQRankSum=-1.095;QD=34.65;ReadPosRankSum=2.628;VQSLOD=5.7084;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:63.21:0,63,1216	0/0:3,0:3:9.01:0,9,115	0/0:32,0:25:41.84:0,42,717	0/0:47,0:41:88.94:0,89,1423	0/0:15,0:15:45.13:0,45,838	1/1:0,22:22:54.13:841,54,0	1/1:0,14:14:33.11:528,33,0	0/0:23,0:23:63.17:0,63,1132	0/0:11,0:11:33.10:0,33,593	0/0:22,0:22:66.09:0,66,1103	0/0:6,0:6:18.05:0,18,319	0/0:10,0:11:32.88:0,33,398	0/0:12,0:12:36.11:0,36,637	0/0:19,0:19:51.12:0,51,814	0/0:16,0:16:45.07:0,45,850	0/0:15,0:15:39.12:0,39,753	0/0:22,0:22:57.15:0,57,1049	0/0:16,0:16:48.16:0,48,926	0/0:22,0:22:66.18:0,66,1111	0/0:15,0:15:45.13:0,45,841	0/0:31,0:31:81.17:0,81,1493	0/0:10,0:10:30.10:0,30,572	0/0:18,0:18:18.30:0,18,295	0/0:13,0:13:30.56:0,31,392	0/0:18,0:18:54.15:0,54,1047	0/0:16,0:16:39.12:0,39,717	0/0:21,0:21:63.21:0,63,1214	0/0:4,0:4:12.04:0,12,240
chr10	41197007	.	T	TCC	724.69	PASS	AB=0.968;AC=7;AF=0.125;AN=56;BaseQRankSum=-1.484;DP=503;FS=0.725;HRun=9;HaplotypeScore=102.8856;InbreedingCoeff=0.7494;MQ=75.80;MQ0=1;MQRankSum=-1.286;QD=10.07;ReadPosRankSum=-2.894;VQSLOD=0.7282;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:57.11:0,57,607	0/0:3,0:3:3:0,3,32	0/1:29,0:23:16.26:16,0,221	0/0:48,0:43:33.21:0,33,528	0/0:15,0:15:39.09:0,39,415	0/0:23,0:23:47.59:0,48,225	0/0:14,0:14:30.99:0,31,147	0/0:23,0:23:39:0,39,415	0/0:11,0:11:27.06:0,27,287	0/0:22,0:22:45.06:0,45,469	0/0:6,0:6:18.02:0,18,182	1/1:8,3:11:27.04:331,27,0	0/0:13,0:13:24.02:0,24,255	0/0:18,0:18:10.23:0,10,268	0/0:15,0:16:44.51:0,45,459	0/0:16,0:16:36.08:0,36,383	0/0:22,0:22:50.85:0,51,522	0/0:17,0:17:45.09:0,45,479	0/0:21,0:21:42.06:0,42,442	0/0:15,0:15:39.09:0,39,413	0/0:31,0:31:75.10:0,75,770	0/0:10,0:10:30.08:0,30,319	1/1:6,10:18:17.37:222,17,0	1/1:5,4:13:26.02:301,26,0	0/0:22,0:22:48.07:0,48,511	0/0:15,0:15:30.02:0,30,311	0/0:21,0:21:60.15:0,60,638	0/0:4,0:4:5.98:0,6,64
chr10	41197052	.	GGTGT	G	1717.93	PASS	AB=0.933;AC=28;AF=0.560;AN=50;BaseQRankSum=4.683;DP=518;FS=2.110;HRun=0;HaplotypeScore=120.9669;InbreedingCoeff=0.4997;MQ=54.59;MQ0=10;MQRankSum=-4.197;QD=5.40;ReadPosRankSum=0.318;VQSLOD=2.2806;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:36:11.92:0,12,200	./.	./.	./.	1/1:9,0:15:2.81:25,3,0	1/1:18,1:26:21.50:215,22,0	1/1:12,0:18:8.76:83,9,0	0/1:30,1:30:31.78:75,0,32	0/0:8,0:10:14.50:0,15,175	0/0:21,0:22:29.38:0,29,442	0/0:9,0:9:3.01:0,3,72	0/0:7,0:12:15.05:0,15,262	0/1:13,1:15:62.13:62,0,385	1/1:7,0:14:3.44:21,3,0	0/1:16,0:17:16.36:16,0,443	1/1:8,0:19:24.03:223,24,0	1/1:17,0:23:12.01:111,12,0	0/1:23,2:24:3.81:4,0,697	1/1:12,0:12:2.79:28,3,0	1/1:3,2:5:2.97:20,3,0	1/1:38,14:52:1.78:267,2,0	0/0:12,0:13:8.75:0,9,108	0/0:12,0:11:21.04:0,21,437	0/0:16,0:23:39.09:0,39,705	0/0:19,0:20:29.77:0,30,451	1/1:9,6:15:18.52:248,19,0	1/1:12,7:19:20.69:264,21,0	1/1:2,8:10:15.05:236,15,0
chr10	41200167	.	A	AGAG	18360.39	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-15.007;DP=701;FS=5.875;HRun=0;HaplotypeScore=89.3690;InbreedingCoeff=0.9919;MQ=87.54;MQ0=0;MQRankSum=-8.607;QD=55.14;ReadPosRankSum=0.615;VQSLOD=6.4501;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,117,1893	0/0:12,0:12:36.12:0,36,599	0/0:27,0:27:66.22:0,66,1065	0/0:24,0:24:69.10:0,69,1063	1/1:2,19:21:51.18:1129,51,0	1/1:0,15:15:42.14:950,42,0	1/1:5,19:24:45.15:1018,45,0	1/1:6,24:31:78.22:1618,78,0	0/0:20,0:20:60.21:0,60,996	0/0:22,0:22:66.21:0,66,1074	0/0:18,0:18:51.16:0,51,824	0/0:31,1:32:28.34:0,28,1479	0/0:30,0:30:81.25:0,81,1278	1/1:2,23:25:69.24:1550,69,0	0/0:32,0:32:87.27:0,87,1398	1/1:2,34:36:99:2296,102,0	1/1:2,24:27:57.20:1290,57,0	0/0:20,0:20:60.17:0,60,970	1/1:5,14:20:54.19:1191,54,0	1/1:2,24:27:66.23:1474,66,0	1/1:3,35:40:96.31:2174,96,0	0/0:26,0:26:78.22:0,78,1201	0/0:21,0:21:57.01:0,57,837	0/0:23,0:23:69.19:0,69,1073	0/0:21,0:21:60.14:0,60,963	1/1:5,22:29:87.26:1834,87,0	1/1:5,27:34:72.25:1631,72,0	1/1:0,4:4:9.03:204,9,0
chr10	41201037	.	T	TG	7090.84	PASS	AB=0.563;AC=21;AF=0.375;AN=56;BaseQRankSum=-13.024;DP=721;FS=0.639;HRun=8;HaplotypeScore=74.7759;InbreedingCoeff=0.9481;MQ=83.74;MQ0=0;MQRankSum=0.573;QD=24.04;ReadPosRankSum=-0.510;VQSLOD=5.1952;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:64.97:0,65,569	0/0:10,0:10:27:0,27,242	0/0:30,0:29:59.04:0,59,491	0/0:19,0:19:15.42:0,15,155	1/1:3,23:26:69.07:760,69,0	0/0:26,0:26:68.99:0,69,623	0/0:21,0:21:54.02:0,54,494	1/1:8,22:31:56.98:613,57,0	0/0:18,0:18:45:0,45,408	0/0:27,0:27:66:0,66,594	0/0:31,0:31:78.03:0,78,714	0/0:22,0:22:59.98:0,60,541	0/0:23,0:23:57:0,57,512	1/1:11,18:29:17.69:452,18,0	0/0:34,0:34:90.03:0,90,823	1/1:5,13:18:32.60:380,33,0	0/1:4,14:18:2.25:434,0,2	0/0:23,0:23:66:0,66,593	1/1:9,23:33:20.11:701,20,0	1/1:4,24:28:69.20:795,69,0	1/1:3,31:34:53.78:873,54,0	0/0:28,0:28:78.02:0,78,708	0/0:25,0:25:57.01:0,57,521	0/0:27,0:27:77.98:0,78,696	0/0:35,0:36:99:0,101,898	1/1:6,27:33:50.77:837,51,0	1/1:7,27:34:81.24:932,81,0	1/1:0,11:11:27.08:312,27,0
chr10	41202071	.	TA	T	7807.66	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=12.341;DP=603;FS=0.000;HRun=6;HaplotypeScore=57.0532;InbreedingCoeff=0.9976;MQ=77.95;MQ0=0;MQRankSum=-2.834;QD=27.11;ReadPosRankSum=-0.262;VQSLOD=4.8136;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,147,1919	0/0:7,0:7:18.06:0,18,237	0/0:9,0:9:18.02:0,18,199	0/0:16,0:16:35.85:0,36,451	1/1:2,24:26:66.07:683,66,0	1/1:5,17:22:45.11:484,45,0	1/1:2,23:25:63.16:677,63,0	1/1:4,33:37:99:1048,99,0	0/0:18,0:18:54.18:0,54,710	0/0:35,0:35:93.30:0,93,1213	0/0:22,0:22:60.17:0,60,754	0/0:21,0:21:63.19:0,63,814	0/0:23,0:23:63.20:0,63,829	1/1:1,17:18:45.11:484,45,0	0/0:15,0:15:39.13:0,39,512	1/1:0,16:16:48.12:516,48,0	1/1:1,23:24:43.93:626,44,0	0/0:12,0:12:33.09:0,33,419	1/1:0,23:23:69.15:731,69,0	1/1:1,16:17:42.10:451,42,0	1/1:2,13:15:39.10:419,39,0	0/0:18,0:18:51.15:0,51,656	0/0:24,0:24:60.19:0,60,786	0/0:16,0:16:45.15:0,45,592	0/0:30,0:30:84.27:0,84,1099	1/1:4,24:28:35.68:723,36,0	1/1:1,23:24:57.14:612,57,0	1/1:0,13:13:33.08:355,33,0
chr10	41202184	.	CT	C	1426.70	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.553;DP=682;FS=0.617;HRun=1;HaplotypeScore=70.9482;InbreedingCoeff=0.9992;MQ=78.84;MQ0=0;MQRankSum=-1.139;QD=36.58;ReadPosRankSum=1.195;VQSLOD=4.0718;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,141,2184	0/0:13,0:13:36.12:0,36,575	0/0:20,0:20:49.83:0,50,797	0/0:12,0:12:32.94:0,33,470	0/0:22,0:22:66.23:0,66,1050	1/1:0,24:24:69.23:962,69,0	1/1:0,15:15:42.14:586,42,0	0/0:33,0:33:99:0,99,1522	0/0:37,0:37:99:0,108,1677	0/0:30,0:30:90.30:0,90,1415	0/0:30,0:30:81.28:0,81,1289	0/0:25,0:25:75.24:0,75,1171	0/0:22,0:22:66.20:0,66,1009	0/0:25,0:25:75.23:0,75,1149	0/0:21,0:21:63.21:0,63,1005	0/0:22,0:22:66.23:0,66,1054	0/0:33,0:33:99:0,99,1540	0/0:14,0:14:42.13:0,42,644	0/0:22,0:22:66.23:0,66,1054	0/0:35,0:35:99:0,105,1664	0/0:26,0:26:75.24:0,75,1172	0/0:27,0:27:71.61:0,72,1090	0/0:25,0:25:66.20:0,66,1007	0/0:12,0:12:36.12:0,36,575	0/0:20,0:20:60.18:0,60,934	0/0:33,0:33:99:0,99,1458	0/0:27,0:26:81.28:0,81,1288	0/0:10,0:10:27.08:0,27,408
chr10	41202423	.	A	ATC	730.82	PASS	AB=0.879;AC=21;AF=0.404;AN=52;BaseQRankSum=0.898;DP=608;FS=0.747;HRun=0;HaplotypeScore=113.4148;InbreedingCoeff=0.3791;MQ=61.02;MQ0=6;MQRankSum=-0.957;QD=2.37;ReadPosRankSum=-2.425;VQSLOD=2.0472;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:26:3:26,3,0	0/0:12,0:12:11.93:0,12,133	./.	./.	1/1:26,0:26:8.81:72,9,0	1/1:19,0:19:1.96:22,2,0	1/1:18,0:18:3.46:25,3,0	0/0:36,0:36:23.23:0,23,269	0/0:27,0:27:49.27:0,49,482	0/1:19,7:26:9.89:251,0,10	1/1:17,6:25:3.01:46,3,0	0/0:18,0:18:26.74:0,27,304	0/0:31,0:31:45.11:0,45,497	1/1:24,0:23:6.22:42,6,0	1/1:8,12:19:6.02:92,6,0	0/1:26,0:26:0.29:71,0,0	0/1:12,0:24:2.72:42,0,3	0/1:17,0:17:3.17:82,0,3	0/0:21,0:21:23.84:0,24,219	0/0:17,0:16:15.01:0,15,156	0/0:17,0:17:20.72:0,21,183	0/0:15,0:14:15.04:0,15,173	0/0:15,0:18:14.86:0,15,150	0/0:19,0:17:24.82:0,25,254	0/1:16,11:28:24.79:83,0,25	0/0:33,0:33:44.94:0,45,479	0/1:19,0:21:10.02:10,0,320	0/1:8,0:8:31.99:32,0,70
chr10	41202488	.	CTCTCTCTCTCTG	C	1913.57	PASS	AB=1.000;AC=9;AF=0.167;AN=54;BaseQRankSum=2.008;DP=531;FS=0.600;HRun=0;HaplotypeScore=188.9927;InbreedingCoeff=0.1275;MQ=44.23;MQ0=36;MQRankSum=-2.593;QD=11.89;ReadPosRankSum=0.722;VQSLOD=2.7443;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:20,0:20:38.71:39,0,439	0/0:11,0:11:17.86:0,18,406	./.	0/0:6,0:1:0.89:0,1,2	0/0:21,0:21:39.07:0,39,771	0/0:19,0:14:3.46:0,3,24	0/0:18,0:17:5.84:0,6,34	0/1:33,0:27:71.36:304,0,71	0/0:26,0:25:41.75:0,42,816	0/0:29,0:27:75.16:0,75,1845	0/0:16,0:16:26.92:0,27,724	0/0:28,0:26:34.83:0,35,561	0/0:31,0:30:52.54:0,53,1001	0/0:19,0:17:20.83:0,21,363	0/0:20,0:19:18.06:0,18,546	0/0:17,0:17:24.42:0,24,266	0/0:15,0:13:32.03:0,32,415	0/0:15,0:12:25.65:0,26,465	0/1:14,0:13:5.07:113,0,5	0/1:18,0:17:11.56:24,0,12	0/1:14,0:13:19.01:62,0,19	0/0:24,0:24:18.65:0,19,555	0/0:8,0:8:2.50:0,3,24	0/0:23,0:19:23.80:0,24,274	0/0:20,0:20:33.10:0,33,920	1/1:14,14:28:56.51:1167,57,0	0/1:22,0:20:15.61:286,0,16	0/1:12,0:5:7.54:62,0,8
chr10	41202492	.	CTCTCTCTG	C	2853.93	PASS	AB=1.000;AC=16;AF=0.296;AN=54;BaseQRankSum=-0.039;DP=543;FS=12.201;HRun=0;HaplotypeScore=165.8420;InbreedingCoeff=0.6901;MQ=44.61;MQ0=39;MQRankSum=-3.430;QD=16.12;ReadPosRankSum=0.426;VQSLOD=1.7317;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:20,0:20:54.53:55,0,339	0/0:9,0:9:14.82:0,15,257	./.	0/0:9,0:1:0.89:0,1,2	0/0:21,0:21:39.05:0,39,551	0/0:20,0:15:6.45:0,6,47	0/0:20,0:19:8.84:0,9,58	1/1:31,0:25:26.08:309,26,0	0/0:28,0:27:20.14:0,20,466	0/0:30,0:28:75.12:0,75,1388	0/0:15,0:15:27.06:0,27,544	0/0:28,0:26:37.27:0,37,418	0/0:33,0:32:30:0,30,616	0/0:20,0:17:20.37:0,20,212	0/0:20,0:19:23.28:0,23,475	0/0:16,0:16:18.10:0,18,170	0/0:15,0:13:24.40:0,24,226	0/1:16,0:13:59.20:59,0,274	1/1:17,0:16:23.43:376,23,0	1/1:1,18:18:11.92:196,12,0	1/1:16,0:14:5.66:143,6,0	0/0:25,0:25:13.31:0,13,383	0/0:8,0:8:2.03:0,2,24	0/0:22,0:18:23.75:0,24,264	0/0:21,0:21:39.08:0,39,851	1/1:26,0:26:72.08:1037,72,0	1/1:20,4:22:43.25:785,43,0	1/1:8,0:3:6:79,6,0
chr10	41202496	.	C	CTG	1049.16	PASS	AB=0.996;AC=17;AF=0.304;AN=56;BaseQRankSum=-0.465;DP=571;FS=11.490;HRun=0;HaplotypeScore=134.4829;InbreedingCoeff=0.2766;MQ=47.21;MQ0=41;MQRankSum=4.384;QD=4.08;ReadPosRankSum=-1.486;VQSLOD=1.4057;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:37.67:0,38,323	0/0:8,0:8:12.01:0,12,136	0/0:13,0:1:2.94:0,3,18	0/0:21,0:5:3.95:0,4,12	1/1:21,0:21:7.53:223,8,0	1/1:22,0:17:8.98:72,9,0	1/1:20,0:19:8.82:58,9,0	0/0:34,0:29:57.16:0,57,394	0/1:25,0:24:16.01:158,0,16	0/0:31,0:29:69.64:0,70,513	0/0:14,0:14:26.78:0,27,210	0/1:28,0:25:39.82:82,0,40	0/1:34,1:34:35.65:141,0,36	0/1:19,0:16:21.18:56,0,21	0/0:20,0:19:20.65:0,21,152	0/1:14,0:14:21.45:87,0,21	0/1:17,0:15:54.03:68,0,54	0/0:19,0:16:28.09:0,28,162	0/0:17,0:16:24.65:0,25,214	0/0:19,0:18:9.20:0,9,51	0/0:17,0:15:15.08:0,15,107	1/1:11,14:26:9.22:149,9,0	1/1:8,0:8:3:25,3,0	0/1:22,0:18:12.83:104,0,13	0/0:22,0:22:31.20:0,31,235	0/0:26,0:26:29.66:0,30,287	0/0:25,0:23:21.09:0,21,199	0/0:9,0:4:10.47:0,10,69
chr10	41204230	.	GT	G	757.02	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.559;DP=661;FS=9.671;HRun=9;HaplotypeScore=71.2066;InbreedingCoeff=0.9987;MQ=84.57;MQ0=0;MQRankSum=-3.549;QD=19.92;ReadPosRankSum=-0.329;VQSLOD=3.5088;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:25:69.02:0,69,766	0/0:11,0:11:33.10:0,33,381	0/0:18,0:19:44.48:0,44,442	0/0:22,0:23:41.99:0,42,443	0/0:33,0:33:87.26:0,87,1004	1/1:2,16:18:42.02:384,42,0	1/1:2,18:20:54.03:494,54,0	0/0:25,0:25:54.16:0,54,623	0/0:24,0:25:72.04:0,72,803	0/0:32,0:32:93.28:0,93,1074	0/0:23,0:23:57.13:0,57,643	0/0:24,0:24:69.17:0,69,783	0/0:22,0:22:54.16:0,54,623	0/0:26,0:26:57.17:0,57,658	0/0:27,0:27:69.18:0,69,775	0/0:22,0:22:60.18:0,60,692	0/0:25,0:25:69.20:0,69,796	0/0:18,0:18:48.13:0,48,543	0/0:34,0:36:93.04:0,93,1017	0/0:20,0:20:60.17:0,60,681	0/0:26,0:26:72.20:0,72,821	0/0:18,0:18:45.13:0,45,518	0/0:22,0:22:60.18:0,60,690	0/0:26,0:26:78.22:0,78,889	0/0:19,0:20:57:0,57,638	0/0:30,0:30:57.55:0,58,886	0/0:35,0:35:93.28:0,93,1073	0/0:10,0:10:24.01:0,24,265
chr10	41205732	.	CCT	C	1067.89	PASS	AB=1.000;AC=16;AF=0.286;AN=56;BaseQRankSum=5.561;DP=602;FS=16.977;HRun=0;HaplotypeScore=101.0004;InbreedingCoeff=0.8079;MQ=62.81;MQ0=17;MQRankSum=-0.299;QD=6.10;ReadPosRankSum=2.388;VQSLOD=1.9727;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:33:71.35:0,71,714	0/0:7,0:7:18.02:0,18,217	0/0:28,0:17:32.05:0,32,337	0/0:26,0:11:18.02:0,18,218	0/1:31,0:31:0:0,0,0	0/1:21,0:21:0:0,0,0	1/1:19,0:17:35.29:282,35,0	0/0:27,0:27:63.44:0,63,567	1/1:9,0:9:20.93:179,21,0	0/0:20,0:20:51.71:0,52,443	0/0:18,0:18:17.80:0,18,189	0/0:25,0:24:30.27:0,30,246	1/1:3,11:14:2.96:27,3,0	1/1:13,0:13:29.81:303,30,0	0/0:15,0:15:26.37:0,26,184	1/1:21,0:21:44.93:422,45,0	1/1:24,0:23:2.98:21,3,0	0/0:9,0:8:2.78:0,3,83	0/0:21,0:20:42.18:0,42,315	0/0:24,0:24:50.05:0,50,401	0/0:33,0:32:56.09:0,56,417	1/1:23,0:23:0.47:1,0,0	0/0:22,0:22:45.70:0,46,343	0/0:37,0:37:34.51:0,35,250	0/0:28,0:28:53.12:0,53,476	0/0:15,0:15:36.24:0,36,275	0/0:16,0:14:18.14:0,18,161	0/0:22,0:21:43.03:0,43,323
chr10	41205737	.	CTCTG	C	1558.42	PASS	AB=0.764;AC=18;AF=0.321;AN=56;BaseQRankSum=4.698;DP=608;FS=9.917;HRun=0;HaplotypeScore=114.4082;InbreedingCoeff=0.6715;MQ=56.98;MQ0=38;MQRankSum=0.281;QD=7.60;ReadPosRankSum=3.659;VQSLOD=1.8074;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:35:74.62:0,75,892	0/0:7,0:7:18.02:0,18,288	0/0:24,0:13:32.05:0,32,337	0/0:25,0:10:19.81:0,20,221	0/1:2,26:29:0:0,0,0	0/1:3,17:20:0:0,0,0	1/1:22,0:16:35.52:378,36,0	0/0:25,0:25:51.67:0,52,573	1/1:8,0:9:20.93:222,21,0	0/0:21,0:20:45.93:0,46,457	0/0:18,0:16:31.49:0,31,296	0/0:23,0:22:47.54:0,48,361	1/1:13,0:13:2.55:47,3,0	1/1:15,0:14:32.35:415,32,0	0/1:19,0:18:9.81:10,0,204	1/1:22,0:21:50.31:624,50,0	1/1:4,0:22:2.98:21,3,0	0/1:9,0:8:10.09:10,0,145	0/0:22,0:20:37.12:0,37,421	0/0:25,0:25:63.98:0,64,520	0/0:36,0:32:57.47:0,57,488	1/1:1,19:20:0.47:2,0,0	0/0:21,0:20:47.42:0,47,445	0/0:36,0:37:30.78:0,31,504	0/0:28,0:28:62.36:0,62,608	0/0:15,0:15:17.59:0,18,283	0/0:18,0:15:4.95:0,5,148	0/0:21,0:18:38.58:0,39,414
chr10	41205739	.	CTG	C	1929.17	PASS	AB=0.976;AC=43;AF=0.860;AN=50;BaseQRankSum=0.250;DP=620;FS=0.000;HRun=0;HaplotypeScore=100.2189;InbreedingCoeff=0.3440;MQ=55.90;MQ0=49;MQRankSum=0.840;QD=3.58;ReadPosRankSum=-0.186;VQSLOD=2.2917;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:38,0:36:0.48:0,0,139	0/0:7,0:6:8.98:0,9,73	./.	./.	0/1:28,0:28:0:0,0,0	0/1:23,0:21:0:0,0,0	1/1:25,0:17:9.23:40,9,0	1/1:24,2:24:1.23:37,1,0	1/1:9,0:9:5.87:36,6,0	1/1:17,4:19:11.84:82,12,0	1/1:19,0:16:17.95:144,18,0	1/1:26,0:23:17.96:148,18,0	1/1:13,0:13:2.83:14,3,0	1/1:15,0:14:20.25:122,20,0	1/1:19,0:18:17.26:137,17,0	1/1:22,0:20:25.61:149,26,0	./.	0/1:10,0:8:8.10:66,0,8	1/1:20,0:18:14.82:107,15,0	1/1:24,0:24:14.97:123,15,0	1/1:36,0:32:14.63:103,15,0	1/1:22,0:21:0.47:1,0,0	1/1:21,0:20:5.15:116,5,0	1/1:38,0:36:22.47:317,22,0	0/1:26,1:27:6.99:100,0,7	1/1:15,0:15:11.85:78,12,0	1/1:19,0:15:5.81:37,6,0	1/1:21,0:18:11.83:86,12,0
chr10	41205818	.	AGG	A	2220.64	PASS	AB=1.000;AC=37;AF=0.661;AN=56;BaseQRankSum=1.911;DP=530;FS=0.582;HRun=3;HaplotypeScore=101.5619;InbreedingCoeff=-0.0446;MQ=40.68;MQ0=76;MQRankSum=4.558;QD=4.68;ReadPosRankSum=1.595;VQSLOD=-0.2082;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:24:23.96:139,24,0	0/0:15,0:13:13.23:0,13,127	0/0:9,0:3:6.87:0,7,25	0/0:17,0:3:1.69:0,2,4	0/1:10,0:9:17.09:28,0,17	1/1:21,0:17:13.77:95,14,0	1/1:13,0:11:3.47:27,3,0	0/1:35,0:34:15.01:239,0,15	1/1:19,0:17:24.87:161,25,0	0/1:10,0:6:20.62:21,0,45	0/0:8,7:12:3:0,3,27	1/1:24,0:20:24.34:106,24,0	0/1:19,0:15:7.32:92,0,7	0/1:16,0:14:19.35:36,0,19	0/1:23,0:21:14.01:184,0,14	1/1:17,0:15:24.21:164,24,0	0/1:26,0:19:32.22:97,0,32	0/1:15,0:8:13.48:51,0,13	0/1:18,0:18:29.45:144,0,29	1/1:14,0:14:5.13:42,5,0	1/1:24,0:19:17.41:155,17,0	1/1:18,4:19:2.49:16,2,0	0/1:18,0:15:3.99:4,0,4	0/1:42,0:32:24.82:95,0,25	1/1:10,0:8:1.09:36,1,0	1/1:21,0:18:23.66:224,24,0	1/1:14,0:7:1.81:95,2,0	1/1:15,0:11:1.73:127,2,0
chr10	41205820	.	GGAGAGA	G	1961.01	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=-3.185;DP=549;FS=13.206;HRun=0;HaplotypeScore=124.2976;InbreedingCoeff=0.6169;MQ=41.71;MQ0=74;MQRankSum=0.486;QD=13.62;ReadPosRankSum=2.706;VQSLOD=2.1524;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:25:25.04:0,25,141	0/0:15,0:13:18.05:0,18,257	0/0:9,0:3:7.50:0,8,48	0/0:21,0:3:4.63:0,5,19	0/0:11,0:10:8.04:0,8,82	0/0:22,0:18:1.21:0,1,5	0/0:14,0:12:2.59:0,3,24	1/1:16,21:36:51.01:586,51,0	0/0:19,0:17:10.44:0,10,34	0/0:10,0:6:13.07:0,13,149	0/0:16,0:13:2.04:0,2,50	0/0:23,0:19:19.78:0,20,112	0/0:19,0:15:7.95:0,8,40	0/0:18,0:16:10.92:0,11,98	0/0:24,0:22:29.20:0,29,204	0/0:20,0:18:18.13:0,18,71	0/0:24,0:19:16.29:0,16,175	0/0:12,0:9:10.39:0,10,150	1/1:17,0:17:5.87:144,6,0	1/1:15,0:15:9.80:92,10,0	1/1:24,0:19:21.07:339,21,0	0/0:24,0:22:7.55:0,8,54	0/0:19,0:16:8.74:0,9,63	0/0:38,0:29:0.78:0,1,80	0/0:13,0:11:7.61:0,8,57	1/1:8,15:20:20.24:558,20,0	1/1:13,0:7:10.86:180,11,0	0/1:15,0:11:15.15:232,0,15
chr10	41207637	.	TCA	T	10294.23	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=14.339;DP=589;FS=1.364;HRun=0;HaplotypeScore=70.3796;InbreedingCoeff=0.9986;MQ=67.85;MQ0=1;MQRankSum=-1.668;QD=39.14;ReadPosRankSum=0.428;VQSLOD=6.7988;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:75.26:0,75,1394	0/0:12,0:12:30.10:0,30,562	0/0:16,0:16:38.45:0,38,748	0/0:15,0:13:36.12:0,36,636	1/1:1,20:21:60.20:881,60,0	0/0:27,0:26:72.23:0,72,1305	0/0:23,0:23:69.24:0,69,1284	1/1:1,28:29:84.22:1158,84,0	0/0:23,0:23:69.23:0,69,1269	0/0:15,0:15:45.12:0,45,807	0/0:15,0:15:45.12:0,45,771	0/0:23,0:23:69.22:0,69,1259	0/0:24,0:24:72.25:0,72,1330	1/1:0,18:18:48.16:704,48,0	0/0:27,0:26:81.28:0,81,1497	1/1:0,18:18:45.15:663,45,0	1/1:0,32:31:78.26:1149,78,0	0/0:9,0:9:27.09:0,27,505	1/1:3,25:28:75.21:1060,75,0	1/1:0,23:23:63.21:927,63,0	1/1:2,40:42:99:1634,111,0	0/0:13,0:13:33.11:0,33,618	0/0:22,0:22:63.20:0,63,1141	0/0:20,0:20:60.21:0,60,1122	0/0:16,0:16:45.15:0,45,843	1/1:0,22:22:63.21:927,63,0	1/1:1,23:24:63.21:927,63,0	1/1:0,6:6:18.06:265,18,0
chr10	41207809	.	CA	C	7229.85	PASS	AB=0.533;AC=21;AF=0.375;AN=56;BaseQRankSum=15.394;DP=607;FS=9.324;HRun=5;HaplotypeScore=62.6571;InbreedingCoeff=0.9237;MQ=90.97;MQ0=0;MQRankSum=-6.031;QD=29.04;ReadPosRankSum=2.008;VQSLOD=5.1032;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:42.11:0,42,541	0/0:14,0:14:42.13:0,42,560	0/0:30,0:30:85.40:0,85,1076	0/0:18,0:18:39.38:0,39,592	1/1:0,36:36:99:1101,99,0	0/0:19,0:19:54.17:0,54,721	0/0:20,0:20:51.16:0,51,681	1/1:5,28:33:84.20:931,84,0	0/0:25,0:25:75.23:0,75,999	0/0:29,0:29:78.25:0,78,1042	0/0:25,0:25:75.25:0,75,1018	0/0:17,0:17:51.17:0,51,698	0/0:24,0:24:66.21:0,66,887	1/1:1,13:14:30.09:340,30,0	0/0:28,0:28:81.26:0,81,1092	1/1:0,16:16:42.12:476,42,0	1/1:2,22:24:66.12:732,66,0	0/0:15,0:15:42.12:0,42,556	1/1:0,18:18:54.15:612,54,0	1/1:0,32:32:84.15:933,84,0	1/1:0,16:16:45.13:510,45,0	0/0:25,0:25:75.25:0,75,1024	0/0:22,0:22:60.20:0,60,820	0/0:11,0:11:33.09:0,33,420	0/0:18,0:18:51.14:0,51,655	0/1:2,14:16:34.06:410,0,34	1/1:1,27:28:63.18:715,63,0	1/1:1,15:16:42.11:468,42,0
chr10	41208236	.	GT	G	7490.45	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=15.349;DP=509;FS=1.950;HRun=4;HaplotypeScore=65.2217;InbreedingCoeff=0.9958;MQ=66.19;MQ0=1;MQRankSum=-1.792;QD=32.57;ReadPosRankSum=-0.411;VQSLOD=5.2058;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:45.15:0,45,626	0/0:5,0:5:15.05:0,15,206	0/0:11,0:10:30.10:0,30,391	0/0:7,0:6:18.06:0,18,238	1/1:2,21:22:60.18:720,60,0	0/0:14,0:14:36.12:0,36,504	0/0:13,0:13:39.13:0,39,544	1/1:3,27:29:75.21:887,75,0	0/0:20,1:21:27.20:0,27,801	0/0:19,0:19:57.17:0,57,761	0/0:25,0:25:72.22:0,72,961	0/0:19,0:19:51.17:0,51,707	0/0:10,0:10:30.08:0,30,396	1/1:2,13:15:36.11:432,36,0	0/0:19,0:19:54.18:0,54,753	1/1:0,20:20:57.17:684,57,0	1/1:2,14:15:42.13:503,42,0	0/0:23,0:23:57.19:0,57,795	1/1:0,20:20:60.17:707,60,0	1/1:1,34:35:99:1184,99,0	1/1:2,13:15:36.11:431,36,0	0/0:15,0:15:42.14:0,42,588	0/0:23,0:23:66.22:0,66,923	0/0:8,0:8:24.08:0,24,336	0/0:32,0:32:93.31:0,93,1300	1/1:2,12:13:39.12:468,39,0	1/1:0,31:31:93.29:1115,93,0	1/1:1,10:11:30.09:360,30,0
chr10	41208324	.	AG	A	7739.91	PASS	AB=0.847;AC=23;AF=0.411;AN=56;BaseQRankSum=12.732;DP=468;FS=8.016;HRun=2;HaplotypeScore=48.1454;InbreedingCoeff=0.8283;MQ=70.04;MQ0=1;MQRankSum=0.374;QD=32.38;ReadPosRankSum=-2.668;VQSLOD=2.9859;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:27.07:0,27,379	0/0:6,0:6:18:0,18,224	0/1:12,0:10:1.93:2,0,199	0/1:6,0:6:4.42:4,0,145	1/1:1,25:25:69.19:874,69,0	0/0:13,0:13:39.13:0,39,581	0/0:14,0:14:42.10:0,42,553	1/1:0,32:32:96.17:1092,96,0	0/0:11,0:11:30.10:0,30,447	0/0:21,0:21:63.20:0,63,909	0/0:31,0:31:93.30:0,93,1359	0/0:20,0:20:60.18:0,60,856	0/0:14,0:14:42.12:0,42,592	1/1:1,10:11:33.10:415,33,0	0/0:14,0:14:42.04:0,42,559	1/1:0,17:17:51.17:660,51,0	1/1:1,8:8:24.08:311,24,0	0/0:19,0:19:57.16:0,57,806	1/1:5,14:19:54.14:660,54,0	1/1:4,26:30:90.22:1131,90,0	1/1:1,10:11:33.10:415,33,0	0/0:10,0:10:27.08:0,27,384	0/0:20,0:20:57.14:0,57,825	0/0:9,0:9:27.09:0,27,404	0/0:18,0:18:54.17:0,54,789	0/1:4,23:26:11.60:808,0,12	1/1:5,24:29:81.23:1017,81,0	1/1:0,10:9:27.09:349,27,0
chr10	41208515	.	ATGTGTG	A	2543.31	PASS	AB=0.808;AC=30;AF=0.625;AN=48;BaseQRankSum=3.771;DP=591;FS=12.552;HRun=0;HaplotypeScore=151.6900;InbreedingCoeff=0.1235;MQ=63.67;MQ0=25;MQRankSum=-2.677;QD=6.23;ReadPosRankSum=-2.117;VQSLOD=1.7818;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:23:10.10:78,10,0	0/0:11,0:12:15.05:0,15,267	./.	./.	0/0:29,0:27:32.97:0,33,396	1/1:5,0:15:6.02:84,6,0	./.	./.	0/1:15,0:23:18.63:19,0,24	1/1:14,8:21:15.16:348,15,0	0/1:11,3:14:7.86:8,0,53	0/1:9,1:21:43.03:56,0,43	0/1:13,0:22:0.70:1,0,69	0/1:12,0:12:14.78:15,0,175	0/1:10,8:20:10.34:91,0,10	0/0:22,0:22:44.27:0,44,463	0/0:28,0:28:50.50:0,50,516	0/1:15,0:15:25.06:34,0,25	1/1:26,0:24:25.84:446,26,0	1/1:26,0:24:9.03:145,9,0	0/1:25,0:25:4.10:49,0,4	1/1:9,0:16:2.66:5,3,0	1/1:8,4:12:6.02:98,6,0	1/1:9,10:19:2.90:61,3,0	0/1:17,14:30:6.97:113,0,7	0/1:25,0:24:40.59:320,0,41	1/1:22,0:22:17.69:535,18,0	1/1:9,0:8:12.04:197,12,0
chr10	41208529	.	G	GTA	2803.38	PASS	AB=0.934;AC=17;AF=0.304;AN=56;BaseQRankSum=-0.912;DP=617;FS=1.379;HRun=0;HaplotypeScore=133.8219;InbreedingCoeff=0.4136;MQ=52.37;MQ0=36;MQRankSum=0.408;QD=9.31;ReadPosRankSum=5.216;VQSLOD=3.4598;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:25:53.65:0,54,431	0/0:10,0:9:26.98:0,27,260	0/0:10,0:4:11.96:0,12,105	0/0:19,0:10:17.11:0,17,210	1/1:29,2:29:40.05:428,40,0	0/0:12,0:12:8.80:0,9,57	0/0:19,0:18:11.98:0,12,99	0/1:34,0:32:59.11:409,0,59	0/0:25,0:23:41.79:0,42,322	0/0:23,0:22:63.23:0,63,500	0/0:17,0:17:35.84:0,36,300	0/0:21,0:20:19.21:0,19,167	0/0:23,0:23:45.91:0,46,358	0/1:15,1:16:11.42:227,0,11	0/0:18,0:18:23.90:0,24,187	1/1:24,1:26:21.64:483,22,0	1/1:23,5:27:25.62:617,26,0	0/0:19,0:16:14.70:0,15,199	0/1:28,1:27:16.11:310,0,16	1/1:28,1:27:18.18:126,18,0	0/1:13,18:28:16.46:16,0,69	0/0:18,0:16:23.92:0,24,190	0/1:11,0:11:2.41:2,0,53	0/0:24,0:22:14.93:0,15,114	0/0:28,0:27:41.90:0,42,337	0/1:24,0:23:21.03:234,0,21	1/1:26,0:26:9.13:99,9,0	0/1:15,0:12:12.54:35,0,13
chr10	41208551	.	GTGTGTGTGTA	G	4434.03	PASS	AB=0.894;AC=18;AF=0.321;AN=56;BaseQRankSum=4.381;DP=623;FS=1.491;HRun=0;HaplotypeScore=190.9482;InbreedingCoeff=0.2693;MQ=52.14;MQ0=36;MQRankSum=-0.209;QD=14.83;ReadPosRankSum=1.908;VQSLOD=3.8133;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:18:48.41:87,0,48	0/0:6,0:5:15.05:0,15,409	0/0:6,0:1:3.01:0,3,31	0/0:16,0:7:20.69:0,21,145	0/0:30,0:28:3.99:0,4,459	0/1:22,0:22:77.99:78,0,142	0/0:27,0:26:22.44:0,22,197	1/1:25,0:20:24.32:222,24,0	0/0:23,0:21:10.83:0,11,377	0/1:22,0:21:99:202,0,298	0/0:15,0:15:13.17:0,13,383	0/0:22,0:21:12.07:0,12,216	0/0:26,0:26:50.98:0,51,615	0/1:16,0:16:59.22:59,0,283	0/0:18,0:18:4.81:0,5,181	0/0:31,0:31:47.63:0,48,759	0/0:30,0:29:53.60:0,54,833	0/1:15,0:12:27.59:28,0,49	1/1:7,18:23:46.87:905,47,0	1/1:4,25:27:9.01:293,9,0	1/1:38,0:36:37.96:414,38,0	0/0:20,0:18:2.07:0,2,276	0/1:12,0:12:0.44:0,0,71	0/0:26,0:24:19.58:0,20,203	0/0:28,0:27:35.37:0,35,274	0/1:6,18:23:18.31:716,0,18	1/1:3,27:29:14.73:1081,15,0	0/1:5,13:14:58.16:348,0,58
chr10	41208559	.	GTA	G	3493.37	PASS	AB=0.931;AC=24;AF=0.429;AN=56;BaseQRankSum=8.042;DP=639;FS=3.690;HRun=0;HaplotypeScore=146.6750;InbreedingCoeff=0.5813;MQ=53.68;MQ0=32;MQRankSum=1.362;QD=10.40;ReadPosRankSum=3.274;VQSLOD=3.2845;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:20:24.91:0,25,219	0/1:6,0:5:6.71:7,0,47	0/1:12,0:6:4.72:5,0,60	0/0:17,0:10:29.66:0,30,224	0/1:8,20:26:13.83:212,0,14	0/0:24,0:24:29.43:0,29,222	0/0:28,0:27:25.94:0,26,222	1/1:20,8:24:47.72:418,48,0	0/0:23,0:21:28.71:0,29,186	0/0:25,0:24:25.30:0,25,385	0/0:15,0:15:29.97:0,30,255	0/0:24,0:23:9.01:0,9,158	0/0:25,0:25:47.56:0,48,325	1/1:12,2:15:30.84:358,31,0	0/0:20,0:20:29.45:0,29,226	1/1:5,23:28:6.70:424,7,0	1/1:9,20:28:18.13:482,18,0	0/1:13,0:11:5.55:6,0,64	1/1:25,0:23:46.26:336,46,0	1/1:27,0:25:8.97:69,9,0	1/1:43,0:41:39.46:509,39,0	0/0:22,0:21:12.97:0,13,228	0/1:11,0:11:25.92:26,0,63	0/0:29,0:27:24.31:0,24,187	0/0:27,0:26:32.46:0,32,257	1/1:23,0:22:14:292,14,0	1/1:30,0:29:38.62:281,39,0	0/1:18,0:14:8.18:68,0,8
chr10	41209092	.	A	AT	6810.95	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=17.585;DP=584;FS=4.440;HRun=7;HaplotypeScore=89.9954;InbreedingCoeff=0.9868;MQ=71.38;MQ0=0;MQRankSum=-0.960;QD=29.23;ReadPosRankSum=0.386;VQSLOD=5.0304;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:72.12:0,72,695	0/0:17,0:17:48.05:0,48,452	0/0:9,0:9:18.02:0,18,174	0/0:8,0:8:7.26:0,7,85	1/1:3,21:24:54.04:603,54,0	0/0:21,0:21:54.08:0,54,521	0/0:15,0:15:39.06:0,39,377	1/1:3,15:18:45.14:542,45,0	0/0:23,0:23:60.05:0,60,565	0/0:34,0:34:78.11:0,78,753	0/0:13,0:13:39.06:0,39,377	0/0:23,0:23:63.07:0,63,597	0/0:23,0:23:63.06:0,63,600	1/1:4,14:18:42.13:507,42,0	0/0:25,0:25:66.09:0,66,632	1/1:4,19:23:54.17:650,54,0	1/1:6,17:23:51.16:616,51,0	0/0:24,0:24:69.11:0,69,666	1/1:2,18:20:54.17:652,54,0	1/1:1,25:26:72.19:854,72,0	1/1:2,14:16:36.11:435,36,0	0/0:24,0:24:72.12:0,72,695	0/0:17,0:17:48.08:0,48,463	0/0:19,0:19:54.09:0,54,522	0/0:31,0:31:81.09:0,81,771	1/1:3,19:22:57.17:688,57,0	1/1:7,26:34:78.24:937,78,0	1/1:0,9:9:27.08:326,27,0
chr10	41209676	.	GGT	G	1541.52	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.921;DP=669;FS=0.663;HRun=0;HaplotypeScore=83.2341;InbreedingCoeff=0.9994;MQ=79.32;MQ0=0;MQRankSum=-0.116;QD=42.82;ReadPosRankSum=0.991;VQSLOD=5.3655;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,132,2655	0/0:17,0:17:51.15:0,51,997	0/0:21,0:21:63.21:0,63,1164	0/0:20,0:20:57.17:0,57,1101	0/0:25,0:25:72.25:0,72,1438	1/1:0,17:17:51.17:832,51,0	1/1:0,19:19:51.17:831,51,0	0/0:27,0:27:81.27:0,81,1570	0/0:26,0:26:78.27:0,78,1526	0/0:19,0:19:54.14:0,54,1021	0/0:20,0:20:57.20:0,57,1146	0/0:24,0:24:72.20:0,72,1354	0/0:26,0:26:78.25:0,78,1544	0/0:39,0:39:99:0,117,2270	0/0:35,0:35:99:0,99,1980	0/0:22,0:22:66.23:0,66,1315	0/0:28,0:28:81.28:0,81,1620	0/0:17,0:17:51.17:0,51,994	0/0:15,0:15:42.14:0,42,834	0/0:24,0:24:72.25:0,72,1462	0/0:45,0:45:99:0,135,2678	0/0:14,0:14:42.14:0,42,853	0/0:19,0:19:57.20:0,57,1153	0/0:33,0:33:96.33:0,96,1934	0/0:20,0:20:60.21:0,60,1218	0/0:18,0:18:54.19:0,54,1098	0/0:25,0:25:75.26:0,75,1520	0/0:9,0:9:27.09:0,27,549
chr10	41209785	.	TC	T	454.56	PASS	AB=0.838;AC=24;AF=0.923;AN=26;BaseQRankSum=-3.179;DP=64;FS=18.266;HRun=1;HaplotypeScore=13.6097;InbreedingCoeff=-0.2496;MQ=99.45;MQ0=1;MQRankSum=-3.412;QD=10.82;ReadPosRankSum=-1.079;VQSLOD=-0.5963;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,4:5:3.01:42,3,0	./.	0/1:7,2:8:66.10:66,0,81	0/1:9,2:8:47.38:68,0,47	./.	./.	1/1:0,0:1:3.01:42,3,0	1/1:1,0:1:3:26,3,0	./.	1/1:0,0:1:3:26,3,0	./.	./.	./.	./.	1/1:0,3:3:6.01:65,6,0	1/1:1,0:1:2.99:24,3,0	1/1:3,0:3:5.95:42,6,0	./.	./.	1/1:1,0:1:2.99:24,3,0	1/1:2,0:2:6:66,6,0	./.	./.	./.	./.	1/1:1,0:1:3:26,3,0	1/1:1,1:2:2.99:24,3,0	./.
chr10	41212613	.	AGT	A	144.66	PASS	AB=0.963;AC=11;AF=0.204;AN=54;BaseQRankSum=1.310;DP=625;FS=0.000;HRun=0;HaplotypeScore=108.2153;InbreedingCoeff=0.1660;MQ=57.60;MQ0=24;MQRankSum=-0.630;QD=1.05;ReadPosRankSum=0.548;VQSLOD=1.2899;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:35:2.62:0,3,314	0/1:6,0:6:12.87:26,0,13	0/0:60,0:23:5.91:0,6,45	0/0:66,0:28:9.01:0,9,123	0/1:15,0:14:0:0,0,0	0/1:14,2:16:26.96:105,0,27	1/1:8,11:18:4.28:36,4,0	0/0:14,0:13:2.48:0,2,16	0/0:18,0:19:8.27:0,8,55	0/0:28,0:28:29.20:0,29,189	0/0:10,0:9:9.27:0,9,55	0/1:23,2:25:70.59:71,0,139	0/0:24,0:24:22.65:0,23,157	0/0:14,0:13:3.63:0,4,11	0/0:10,0:16:4.76:0,5,60	0/0:16,0:16:0.47:0,0,1	0/0:21,0:20:1.11:0,1,15	0/0:15,0:16:33.30:0,33,285	0/0:17,0:17:1.24:0,1,3	./.	1/1:30,0:28:1.81:5,2,0	0/0:29,0:28:3.45:0,3,50	0/1:12,0:12:15.81:16,0,191	0/0:38,0:37:54.70:0,55,781	0/0:17,0:18:14.87:0,15,129	0/0:17,0:15:0.47:0,0,1	1/1:15,0:15:0.47:1,0,0	0/0:14,0:13:6.45:0,6,47
chr10	41212694	.	TG	T	4523.10	PASS	AB=0.595;AC=21;AF=0.375;AN=56;BaseQRankSum=8.109;DP=581;FS=2.062;HRun=8;HaplotypeScore=106.2552;InbreedingCoeff=0.9202;MQ=67.73;MQ0=9;MQRankSum=-3.780;QD=21.64;ReadPosRankSum=0.434;VQSLOD=4.3379;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:82.39:0,82,946	0/0:11,0:11:30.08:0,30,351	0/0:46,0:31:63.54:0,64,891	0/0:32,0:22:51.60:0,52,575	1/1:1,18:19:44.68:425,45,0	0/0:19,0:18:42.05:0,42,476	0/0:17,0:17:48.14:0,48,568	1/1:4,14:18:48.06:457,48,0	0/0:16,0:15:42.07:0,42,472	0/0:23,0:23:63.17:0,63,729	0/0:15,0:15:42.06:0,42,486	0/0:5,0:23:47.39:0,47,256	0/0:18,1:19:22.24:0,22,538	1/1:3,12:15:29.98:278,30,0	0/0:11,0:11:26.98:0,27,306	1/1:1,14:15:35.20:346,35,0	1/1:5,22:27:65.93:612,66,0	0/0:21,1:22:31.21:0,31,660	1/1:3,18:20:48.07:463,48,0	1/1:0,15:15:42.07:406,42,0	1/1:2,29:29:62.77:563,63,0	0/0:19,0:19:48.11:0,48,547	0/0:2,0:10:23.05:0,23,126	0/0:8,0:27:51.84:0,52,273	0/0:18,0:18:45.12:0,45,522	0/1:7,15:22:54.63:380,0,55	1/1:5,16:21:48.01:448,48,0	1/1:0,5:5:15.02:145,15,0
chr10	41212702	.	GT	G	481.99	PASS	AB=0.976;AC=15;AF=0.268;AN=56;BaseQRankSum=13.670;DP=566;FS=0.376;HRun=1;HaplotypeScore=109.6061;InbreedingCoeff=0.3081;MQ=69.91;MQ0=1;MQRankSum=-2.935;QD=2.20;ReadPosRankSum=4.032;VQSLOD=-0.7056;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,102,1248	0/0:12,0:12:33.10:0,33,446	0/0:35,1:31:73.11:0,73,1078	0/0:24,0:20:49.32:0,49,690	1/1:19,0:19:6.95:68,7,0	0/0:17,0:16:48.06:0,48,617	0/0:17,0:17:48.14:0,48,660	0/1:23,1:24:34.46:34,0,170	0/0:16,0:16:44.46:0,44,557	0/0:23,0:23:69.21:0,69,934	0/0:15,0:15:45.12:0,45,595	0/0:22,0:22:53.95:0,54,365	0/0:18,0:18:38.95:0,39,685	0/1:14,0:14:15.03:54,0,15	0/0:10,0:10:30.09:0,30,402	0/1:18,0:18:41.61:42,0,43	1/1:25,0:25:4.73:132,5,0	0/0:21,0:21:53.66:0,54,822	0/1:20,0:19:24.43:26,0,24	1/1:16,0:16:5.59:62,6,0	0/1:32,0:31:29.33:47,0,29	0/0:19,0:19:54.12:0,54,685	0/0:10,0:10:29.07:0,29,185	0/0:24,0:23:52.15:0,52,300	0/0:18,0:18:51.08:0,51,652	0/1:25,0:25:4.88:5,0,237	0/1:18,3:21:8.64:146,0,9	1/1:5,0:5:9.90:31,10,0
chr10	41217282	.	CT	C	1513	PASS	AB=0.778;AC=14;AF=0.250;AN=56;BaseQRankSum=13.818;DP=667;FS=0.944;HRun=2;HaplotypeScore=113.7844;InbreedingCoeff=0.7770;MQ=67.02;MQ0=1;MQRankSum=-12.618;QD=12.61;ReadPosRankSum=0.315;VQSLOD=2.4409;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,138,2017	0/0:8,0:8:24.08:0,24,360	0/0:18,0:18:46.29:0,46,562	0/1:13,0:13:10.21:10,0,319	0/0:24,0:23:69.21:0,69,994	0/0:31,0:31:93.32:0,93,1393	0/0:26,0:26:78.21:0,78,1124	1/1:7,9:15:23.76:207,24,0	0/0:35,0:35:99:0,102,1528	0/0:33,0:33:93.32:0,93,1393	0/0:14,0:14:42.10:0,42,599	0/0:41,0:41:99:0,123,1786	0/0:28,0:28:84.26:0,84,1237	0/0:28,0:28:81.25:0,81,1174	0/0:34,0:34:93.30:0,93,1374	0/0:26,0:26:78.25:0,78,1149	0/0:43,0:43:99:0,126,1761	0/0:37,0:37:99:0,111,1591	1/1:6,9:15:29.96:251,30,0	1/1:2,13:15:32.85:255,33,0	1/1:5,8:13:14.70:105,15,0	0/0:22,0:22:66.20:0,66,948	0/0:12,0:12:36.12:0,36,540	0/0:29,0:29:86.88:0,87,1269	0/0:10,0:10:30.09:0,30,432	0/1:4,16:20:36:347,0,36	1/1:4,22:26:62.81:499,63,0	1/1:0,1:1:2.99:24,3,0
chr10	41217285	.	CTGT	C	2908.36	PASS	AB=0.529;AC=13;AF=0.232;AN=56;BaseQRankSum=13.706;DP=640;FS=2.769;HRun=0;HaplotypeScore=130.4492;InbreedingCoeff=0.8561;MQ=66.59;MQ0=1;MQRankSum=-13.154;QD=35.04;ReadPosRankSum=0.722;VQSLOD=4.3672;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,129,3121	0/0:8,0:8:24.08:0,24,592	0/0:19,0:19:39.04:0,39,915	0/0:16,0:15:41.63:0,42,732	0/0:24,0:23:66.70:0,67,1595	0/0:31,0:31:93.31:0,93,2243	0/0:29,0:29:87.26:0,87,1903	1/1:0,9:8:19.57:323,20,0	0/0:36,0:36:99:0,108,2502	0/0:32,0:32:93.32:0,93,2276	0/0:14,0:14:39.13:0,39,918	0/0:39,0:39:99:0,117,2832	0/0:28,0:28:84.29:0,84,2042	0/0:27,0:27:81.28:0,81,1958	0/0:32,0:32:93.32:0,93,2233	0/0:26,0:26:78.27:0,78,1880	0/0:42,0:42:99:0,123,2955	0/0:37,0:37:99:0,111,2632	1/1:0,10:10:30.10:467,30,0	1/1:0,14:14:30.57:468,31,0	1/1:0,8:8:12.40:157,12,0	0/0:20,0:20:60.18:0,60,1351	0/0:13,0:13:39.12:0,39,867	0/0:29,0:29:87.24:0,87,2088	0/0:10,0:10:30.10:0,30,735	0/1:2,16:18:93.79:691,0,94	1/1:1,22:23:62.24:938,62,0	1/1:0,1:1:3.01:47,3,0
chr10	41217289	.	A	AC	1397.52	PASS	AB=0.529;AC=13;AF=0.232;AN=56;BaseQRankSum=13.638;DP=653;FS=2.808;HRun=0;HaplotypeScore=111.6586;InbreedingCoeff=0.8514;MQ=66.36;MQ0=1;MQRankSum=-13.329;QD=17.04;ReadPosRankSum=1.303;VQSLOD=6.0754;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,132,1810	0/0:8,0:8:24.08:0,24,336	0/0:23,0:22:57.19:0,57,776	0/0:19,0:18:48.14:0,48,647	0/0:25,0:24:72.22:0,72,989	0/0:30,0:30:90.30:0,90,1259	0/0:27,0:27:81.27:0,81,1133	1/1:0,9:8:22.57:194,23,0	0/0:36,0:36:99:0,108,1493	0/0:33,0:33:96.30:0,96,1313	0/0:13,0:13:33.11:0,33,462	0/0:42,0:42:99:0,123,1718	0/0:30,0:30:90.30:0,90,1257	0/0:28,0:28:84.28:0,84,1174	0/0:33,0:33:96.31:0,96,1325	0/0:26,0:26:78.26:0,78,1090	0/0:44,0:44:99:0,129,1804	0/0:36,0:36:99:0,108,1510	1/1:1,9:10:29.57:238,30,0	1/1:1,13:14:29.82:221,30,0	1/1:0,8:8:9.42:66,9,0	0/0:19,0:19:57.19:0,57,797	0/0:11,0:11:33.11:0,33,460	0/0:31,0:31:84.98:0,85,1212	0/0:11,0:11:33.10:0,33,445	0/1:2,16:18:29.96:350,0,30	1/1:0,22:22:59.83:486,60,0	1/1:0,1:1:2.99:24,3,0
chr10	41217294	.	TACA	T	3742.11	PASS	AB=0.529;AC=13;AF=0.232;AN=56;BaseQRankSum=13.541;DP=665;FS=2.119;HRun=0;HaplotypeScore=131.3996;InbreedingCoeff=0.8543;MQ=66.07;MQ0=1;MQRankSum=-12.955;QD=44.55;ReadPosRankSum=1.016;VQSLOD=5.2828;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,135,3310	0/0:8,0:8:24.08:0,24,591	0/0:26,0:23:69.24:0,69,1594	0/0:20,0:20:56.94:0,57,1287	0/0:24,0:23:69.24:0,69,1689	0/0:30,0:30:90.31:0,90,2209	0/0:28,0:28:84.29:0,84,2062	1/1:0,9:8:19.57:388,20,0	0/0:36,0:36:99:0,108,2619	0/0:33,0:33:99:0,99,2391	0/0:13,0:13:36.12:0,36,870	0/0:46,0:46:99:0,138,3331	0/0:29,0:29:87.30:0,87,2114	0/0:28,0:28:84.29:0,84,2055	0/0:33,0:33:99:0,99,2427	0/0:27,0:27:81.27:0,81,1940	0/0:45,0:45:99:0,132,3236	0/0:37,0:37:99:0,111,2708	1/1:0,12:12:33.11:601,33,0	1/1:0,14:14:30.05:557,30,0	1/1:0,8:8:11.21:188,11,0	0/0:18,0:18:54.19:0,54,1284	0/0:10,0:10:30.10:0,30,739	0/0:28,1:29:36.22:0,36,1904	0/0:13,0:13:39.11:0,39,860	0/1:2,16:18:93.78:839,0,94	1/1:0,22:22:60.21:1115,60,0	1/1:0,1:1:3.01:56,3,0
chr10	41218556	.	GACACACAC	G	466.73	PASS	AB=0.852;AC=11;AF=0.212;AN=52;BaseQRankSum=2.665;DP=567;FS=5.476;HRun=0;HaplotypeScore=135.1878;InbreedingCoeff=0.3668;MQ=66.76;MQ0=15;MQRankSum=-4.131;QD=3.24;ReadPosRankSum=0.512;VQSLOD=2.0837;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:24:27.09:0,27,871	0/0:6,0:8:9.02:0,9,289	./.	./.	1/1:18,5:23:3.01:74,3,0	0/0:13,0:23:6.01:0,6,129	0/0:25,0:25:18.53:0,19,639	0/0:21,0:20:8.97:0,9,86	0/0:15,0:19:15.47:0,15,163	0/0:21,0:20:24.55:0,25,548	0/0:5,0:8:6.01:0,6,89	0/0:5,0:13:3.01:0,3,105	0/0:10,0:10:6:0,6,54	1/1:23,1:30:12.92:234,13,0	0/0:18,0:23:18.51:0,19,349	1/1:15,6:21:3.01:74,3,0	1/1:16,8:24:5.91:90,6,0	0/0:11,0:15:24.08:0,24,656	0/1:11,0:10:50.65:51,0,54	0/0:17,0:17:15.01:0,15,229	0/0:36,0:42:12.01:0,12,147	0/0:12,0:14:18.04:0,18,341	0/0:16,0:15:9.03:0,9,318	0/0:19,0:22:9.01:0,9,233	0/1:11,0:16:3.90:4,0,79	0/0:13,0:13:3.01:0,3,42	0/1:14,1:18:77.48:77,0,91	0/0:6,0:5:3.01:0,3,42
chr10	41220202	.	AT	A	5167.07	PASS	AB=0.560;AC=21;AF=0.375;AN=56;BaseQRankSum=15.451;DP=590;FS=2.804;HRun=9;HaplotypeScore=74.4627;InbreedingCoeff=0.9002;MQ=72.00;MQ0=0;MQRankSum=-1.163;QD=22.47;ReadPosRankSum=0.049;VQSLOD=5.6285;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:78.20:0,78,881	0/0:11,0:11:33.10:0,33,381	0/0:11,0:9:10.25:0,10,126	0/0:13,0:13:14.19:0,14,128	1/1:4,22:26:34.42:569,34,0	0/0:19,0:19:54.16:0,54,623	0/0:23,0:23:60.18:0,60,692	1/1:4,20:24:57.01:517,57,0	0/0:25,0:25:69.19:0,69,787	0/0:30,0:31:84.08:0,84,949	0/0:14,0:14:39.10:0,39,441	0/0:20,0:20:54.16:0,54,620	0/0:23,0:23:63.18:0,63,717	1/1:0,17:17:51.03:467,51,0	0/0:26,0:28:60.01:0,60,672	1/1:0,25:26:71.07:638,71,0	1/1:2,21:23:54.02:494,54,0	0/0:17,0:17:42.12:0,42,485	1/1:1,13:14:7.39:318,7,0	1/1:2,29:31:49.42:707,49,0	1/1:3,17:20:45.02:412,45,0	0/0:29,0:29:69.21:0,69,797	0/0:21,1:22:29.69:0,30,587	0/0:19,0:19:54.15:0,54,614	0/0:26,0:26:75.19:0,75,844	0/1:6,22:28:28.81:524,0,29	1/1:0,15:15:42.02:384,42,0	1/1:1,5:6:15.01:137,15,0
chr10	41220598	.	TTGTG	T	3138.71	PASS	AB=0.988;AC=28;AF=0.500;AN=56;BaseQRankSum=6.327;DP=471;FS=16.471;HRun=0;HaplotypeScore=121.4191;InbreedingCoeff=0.3098;MQ=50.85;MQ0=11;MQRankSum=-2.915;QD=10.57;ReadPosRankSum=-2.213;VQSLOD=1.4237;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:28:3.93:4,0,138	0/1:6,0:6:20.35:20,0,134	0/0:27,0:13:22.65:0,23,267	0/0:32,0:9:17.64:0,18,194	1/1:12,0:18:18.57:88,19,0	0/0:13,0:13:2.50:0,2,9	0/0:10,0:10:0:0,0,0	1/1:3,18:20:49.69:715,50,0	0/1:18,0:18:8.84:9,0,312	0/0:25,0:25:37.60:0,38,726	0/1:13,0:12:14.71:15,0,282	0/1:17,0:18:44.49:44,0,193	0/0:7,0:7:4.94:0,5,211	1/1:4,0:5:3.89:28,4,0	0/1:18,0:18:3.94:4,0,124	1/1:7,0:10:14.08:82,14,0	0/1:20,0:21:5.43:70,0,5	0/0:11,0:11:2.01:0,2,56	1/1:4,11:14:33.09:471,33,0	1/1:7,11:18:9.01:102,9,0	1/1:17,0:17:23.02:305,23,0	0/0:16,0:16:2.03:0,2,332	0/0:14,0:13:15.32:0,15,330	0/0:19,0:18:0.31:0,0,127	0/1:18,0:18:9.07:9,0,342	1/1:2,15:17:41.07:521,41,0	1/1:21,5:26:47.70:577,48,0	1/1:10,0:10:20.42:251,20,0
chr10	41220612	.	GTGTA	G	3046.27	PASS	AB=0.967;AC=40;AF=0.714;AN=56;BaseQRankSum=7.377;DP=458;FS=9.727;HRun=0;HaplotypeScore=122.4258;InbreedingCoeff=-0.1964;MQ=44.02;MQ0=13;MQRankSum=-1.648;QD=6.94;ReadPosRankSum=2.706;VQSLOD=2.1490;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:29:42.50:50,0,42	0/1:8,1:9:57.67:59,0,58	0/0:19,0:7:17.50:0,17,112	0/1:30,0:7:6.84:7,0,26	1/1:22,0:22:19.51:188,20,0	1/1:11,0:11:8.81:57,9,0	1/1:6,0:6:5.95:44,6,0	1/1:24,0:23:9.86:290,10,0	0/1:20,0:19:99:109,0,130	0/1:27,1:28:99:124,0,245	0/1:14,1:13:50.57:51,0,116	0/1:17,0:17:82.62:128,0,83	0/1:9,0:9:11.91:12,0,95	1/1:5,0:5:7.87:68,8,0	0/1:15,0:15:37.98:48,0,38	1/1:10,0:10:20.81:165,21,0	1/1:18,0:18:35.66:267,36,0	0/1:11,0:11:3.75:76,0,4	1/1:18,0:17:2.41:209,2,0	1/1:12,1:13:8.30:89,8,0	1/1:13,0:13:17.48:132,17,0	0/1:15,0:15:78.20:78,0,139	0/1:16,0:15:4.36:4,0,141	0/1:19,0:18:20.71:21,0,54	0/1:11,6:17:29.10:29,0,146	1/1:17,0:17:44.50:333,44,0	1/1:22,0:22:41.67:377,42,0	1/1:10,0:9:26.71:194,27,0
chr10	41220616	.	ATGTG	A	1976.56	PASS	AB=0.771;AC=40;AF=0.800;AN=50;BaseQRankSum=-1.204;DP=443;FS=0.000;HRun=0;HaplotypeScore=123.5653;InbreedingCoeff=0.1222;MQ=42.86;MQ0=13;MQRankSum=1.073;QD=5.76;ReadPosRankSum=5.647;VQSLOD=1.8758;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:17,8:27:8.67:121,9,0	0/1:4,1:9:3.49:81,0,3	./.	0/0:29,0:6:2.80:0,3,13	1/1:15,3:21:1.66:50,2,0	./.	./.	0/0:24,0:23:5.91:0,6,49	1/1:14,5:19:17.92:226,18,0	1/1:21,1:24:23.89:234,24,0	1/1:16,1:15:9:100,9,0	1/1:10,6:17:14.06:232,14,0	0/1:8,1:9:8.23:41,0,8	1/1:4,1:5:5:71,5,0	1/1:10,4:14:6.02:94,6,0	1/1:7,2:10:5.99:67,6,0	1/1:16,1:17:8.61:80,9,0	0/1:5,6:11:9.95:85,0,10	0/1:15,0:16:10.82:15,0,11	1/1:9,0:12:5.81:47,6,0	0/0:13,0:13:0.47:0,0,1	1/1:11,4:15:9.77:180,10,0	1/1:10,6:15:3.01:47,3,0	1/1:10,8:17:4.83:52,5,0	1/1:15,0:16:3.01:45,3,0	1/1:15,0:17:0.99:22,1,0	1/1:12,0:20:21.17:164,21,0	1/1:9,0:10:2.49:41,2,0
chr10	41221140	.	CAT	C	2954.78	PASS	AB=0.955;AC=23;AF=0.411;AN=56;BaseQRankSum=3.730;DP=542;FS=5.466;HRun=0;HaplotypeScore=103.0409;InbreedingCoeff=0.7411;MQ=66.89;MQ0=9;MQRankSum=-1.736;QD=13.68;ReadPosRankSum=-0.513;VQSLOD=3.1723;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:54.04:0,54,753	0/0:7,0:7:21.05:0,21,365	0/0:27,0:17:41.48:0,41,498	0/0:35,0:18:38.10:0,38,436	1/1:21,0:20:0.29:127,0,0	1/1:17,6:22:62.87:529,63,0	1/1:11,0:11:20.97:172,21,0	1/1:19,0:19:37.81:316,38,0	0/0:18,0:18:29.31:0,29,542	0/0:20,0:20:57.07:0,57,937	0/0:17,0:17:42.05:0,42,536	0/0:24,0:24:53.87:0,54,608	0/0:23,0:23:66.13:0,66,1057	0/1:12,0:12:2.85:76,0,3	0/0:26,0:26:60.15:0,60,996	0/1:17,1:18:15.49:94,0,15	0/1:20,2:22:28.06:200,0,28	0/0:20,0:20:18.74:0,19,724	1/1:1,17:17:42.81:362,43,0	1/1:11,3:14:26.97:230,27,0	1/1:14,1:13:20.93:168,21,0	0/0:16,0:15:39.12:0,39,700	0/0:19,0:19:44.96:0,45,563	0/0:32,0:32:65.22:0,65,1119	0/0:13,0:13:33.06:0,33,596	1/1:18,2:18:50.25:398,50,0	1/1:10,10:19:53.89:467,54,0	1/1:3,0:2:2.99:23,3,0
chr10	41221154	.	CACACACACAT	C	3024.38	PASS	AB=0.980;AC=20;AF=0.357;AN=56;BaseQRankSum=5.591;DP=586;FS=0.000;HRun=0;HaplotypeScore=175.6981;InbreedingCoeff=0.6623;MQ=51.82;MQ0=18;MQRankSum=-5.465;QD=12.71;ReadPosRankSum=-3.341;VQSLOD=2.0427;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:38.68:0,39,678	0/0:8,0:8:20.91:0,21,641	0/0:35,0:11:7.03:0,7,179	0/1:41,0:10:1.94:2,0,54	0/1:20,0:18:1.99:2,0,549	1/1:23,0:22:45.35:759,45,0	1/1:18,0:18:2.90:68,3,0	1/1:11,0:11:11.81:75,12,0	0/0:18,0:18:42.14:0,42,1503	0/0:24,0:24:68.79:0,69,2023	0/0:15,0:14:21.03:0,21,483	0/0:24,0:24:41.78:0,42,1034	0/0:21,0:21:54.06:0,54,1862	0/0:13,0:13:1.39:0,1,637	0/0:26,0:26:66.16:0,66,2556	0/0:24,0:24:8.52:0,9,859	0/1:25,0:25:40.97:41,0,880	0/0:23,0:23:49.61:0,50,2011	1/1:12,2:13:23.74:279,24,0	1/1:7,3:10:12:255,12,0	1/1:24,1:21:27.82:271,28,0	0/0:22,0:21:48.15:0,48,1664	0/0:17,0:17:27.08:0,27,724	0/0:33,0:33:54.31:0,54,1552	0/0:16,0:16:36.10:0,36,1311	0/1:21,2:21:5.30:415,0,5	1/1:14,9:22:56.92:986,57,0	1/1:5,0:4:8.93:64,9,0
chr10	41221156	.	CACACACAT	C	2864.43	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=5.180;DP=587;FS=3.380;HRun=0;HaplotypeScore=157.7362;InbreedingCoeff=0.7133;MQ=50.27;MQ0=19;MQRankSum=-4.522;QD=11.89;ReadPosRankSum=-5.055;VQSLOD=0.4816;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:38.59:0,39,543	0/0:8,0:8:20.90:0,21,523	0/0:32,0:8:7.03:0,7,188	0/1:41,0:8:1.98:2,0,53	0/1:19,0:17:1.99:2,0,397	1/1:18,6:23:51.41:647,51,0	1/1:17,0:17:4.52:51,5,0	1/1:12,0:12:14.81:103,15,0	0/0:18,0:18:40.02:0,40,1220	0/0:26,0:26:74.76:0,75,1746	0/0:16,0:15:20.86:0,21,362	0/0:23,0:23:41.62:0,42,760	0/0:22,0:22:55.88:0,56,1573	0/0:12,0:12:1:0,1,466	0/0:27,0:27:66.16:0,66,2112	0/0:24,0:24:8.99:0,9,633	0/1:27,0:27:98.18:98,0,635	0/0:23,0:23:49.56:0,50,1618	1/1:15,0:14:26.74:285,27,0	1/1:10,0:10:12:223,12,0	1/1:26,0:22:27.40:260,27,0	0/0:22,0:21:48.13:0,48,1365	0/0:18,0:18:27.08:0,27,570	0/0:33,0:33:46.16:0,46,1157	0/0:15,0:15:36.10:0,36,1078	1/1:7,15:20:2.63:410,3,0	1/1:21,0:20:56.92:874,57,0	1/1:7,0:6:14.87:106,15,0
chr10	41221164	.	TAC	T	1290.54	PASS	AB=0.960;AC=23;AF=0.411;AN=56;BaseQRankSum=7.013;DP=611;FS=2.488;HRun=0;HaplotypeScore=117.9691;InbreedingCoeff=0.4806;MQ=52.66;MQ0=22;MQRankSum=-3.661;QD=4.23;ReadPosRankSum=5.620;VQSLOD=2.1460;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,14:28:9.03:106,9,0	0/0:7,0:7:12.04:0,12,180	0/0:34,0:9:14.72:0,15,172	0/0:48,0:12:12.26:0,12,102	0/0:18,0:16:17.95:0,18,159	1/1:22,0:21:18.28:83,18,0	1/1:15,0:15:1.50:8,1,0	0/0:11,0:11:2.94:0,3,26	0/0:21,0:21:12.75:0,13,588	0/0:30,0:30:38.77:0,39,886	0/1:17,3:20:54.70:55,0,267	1/1:5,18:23:32.61:364,33,0	0/0:21,1:22:3.96:0,4,486	0/0:12,0:12:5.95:0,6,131	0/0:28,0:29:46.08:0,46,873	0/0:24,0:24:8.79:0,9,199	0/1:27,0:27:29.91:30,0,210	0/1:24,1:25:25.07:25,0,533	1/1:14,0:12:5.08:25,5,0	1/1:9,0:9:8.39:40,8,0	0/1:29,0:25:4.42:4,0,36	0/0:22,0:21:36.10:0,36,527	1/1:5,12:17:6.61:134,7,0	1/1:13,19:32:40.67:463,41,0	0/0:18,0:18:39.08:0,39,515	0/1:22,0:20:15.79:16,0,40	1/1:21,0:20:25.69:128,26,0	0/0:10,0:9:9.44:0,9,71
chr10	41221168	.	C	CAT	823.43	PASS	AB=0.786;AC=5;AF=0.089;AN=56;BaseQRankSum=5.393;DP=631;FS=0.656;HRun=0;HaplotypeScore=128.9127;InbreedingCoeff=0.3999;MQ=54.38;MQ0=25;MQRankSum=1.649;QD=9.69;ReadPosRankSum=3.193;VQSLOD=3.0455;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:36.03:0,36,258	0/0:7,0:7:21.02:0,21,254	0/0:42,0:13:21.88:0,22,242	0/0:48,0:13:17.01:0,17,172	1/1:6,12:16:15.10:237,15,0	0/0:23,0:22:53.13:0,53,397	0/0:14,0:14:13.98:0,14,115	0/0:14,0:14:35.74:0,36,277	0/0:21,0:21:57.06:0,57,710	0/0:30,0:30:80.86:0,81,1066	0/0:21,0:20:35.79:0,36,395	0/0:22,0:23:41.57:0,42,311	0/0:22,0:22:60.06:0,60,728	0/1:9,3:12:16.16:238,0,16	0/0:30,0:30:75.05:0,75,985	0/1:5,19:24:6.02:313,0,6	0/1:31,0:31:16.05:157,0,16	0/0:24,0:24:48.04:0,48,705	0/0:16,0:14:41.46:0,41,292	0/0:9,0:9:14.74:0,15,96	0/0:30,0:26:36.28:0,36,277	0/0:22,0:21:51.07:0,51,646	0/0:18,0:18:23.83:0,24,174	0/0:28,0:28:59.37:0,59,444	0/0:19,0:19:48.08:0,48,604	0/0:24,0:22:53.50:0,54,412	0/0:21,0:20:53.10:0,53,356	0/0:10,0:9:26.80:0,27,199
chr10	41223508	.	CT	C	573.12	PASS	AB=0.778;AC=11;AF=0.196;AN=56;BaseQRankSum=2.395;DP=289;FS=7.960;HRun=1;HaplotypeScore=59.1523;InbreedingCoeff=0.4717;MQ=39.23;MQ0=15;MQRankSum=-4.962;QD=9.55;ReadPosRankSum=2.233;VQSLOD=1.0675;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:20:19.30:0,19,246	0/1:3,0:3:1.80:2,0,34	0/0:3,0:1:3.01:0,3,38	0/0:4,0:1:3.01:0,3,38	0/0:17,0:17:24.08:0,24,325	0/0:12,0:11:22.41:0,22,266	0/0:9,0:9:13.40:0,13,163	1/1:11,7:17:16.77:239,17,0	0/0:12,0:11:9.03:0,9,129	0/0:11,1:11:12.05:0,12,374	0/0:9,0:9:12.49:0,12,154	0/0:9,0:9:12.02:0,12,136	0/0:17,0:16:23.40:0,23,273	0/0:15,0:14:14.78:0,15,244	0/0:10,0:10:13.29:0,13,166	0/0:2,0:2:6.02:0,6,76	0/0:9,0:7:11.98:0,12,142	0/0:11,0:10:27.05:0,27,359	0/1:4,2:6:2.34:2,0,73	1/1:1,5:4:6.02:80,6,0	1/1:7,4:10:1.04:4,1,0	0/0:14,0:14:15.04:0,15,201	0/0:13,0:13:10.89:0,11,110	0/0:12,1:12:9.03:0,9,119	0/0:10,0:9:12.04:0,12,158	0/0:4,0:4:3.95:0,4,104	1/1:3,6:8:23.97:279,24,0	0/1:2,5:6:25.61:107,0,26
chr10	41223513	.	T	TTCCC	1345.04	PASS	AB=0.943;AC=12;AF=0.222;AN=54;BaseQRankSum=6.444;DP=252;FS=46.240;HRun=0;HaplotypeScore=87.1131;InbreedingCoeff=0.2447;MQ=36.90;MQ0=15;MQRankSum=-6.494;QD=19.21;ReadPosRankSum=1.443;VQSLOD=0.9657;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:17:12.86:0,13,252	0/1:3,0:3:7.79:8,0,39	./.	0/0:3,0:1:3.01:0,3,62	0/0:15,0:15:18.06:0,18,369	0/0:11,0:10:16.52:0,17,250	0/0:8,0:8:5.72:0,6,33	1/1:13,1:13:38.87:716,39,0	0/0:11,0:10:6.01:0,6,74	0/1:11,0:10:14.69:15,0,269	0/0:8,0:8:5.06:0,5,71	0/0:7,0:7:5.81:0,6,88	0/0:14,0:13:15.94:0,16,267	0/0:14,0:13:8.07:0,8,232	0/0:10,0:10:9.65:0,10,209	0/0:1,0:1:2.99:0,3,23	0/0:9,0:7:7.27:0,7,93	0/0:10,0:9:24.03:0,24,385	0/1:2,1:3:3.90:123,0,4	1/1:5,0:3:6.02:124,6,0	0/1:10,0:9:1.99:2,0,14	0/0:13,0:13:12.03:0,12,167	0/1:9,1:10:30.71:31,0,46	0/0:13,0:12:8.37:0,8,64	0/0:10,0:9:12.02:0,12,136	0/0:2,0:2:5.95:0,6,76	1/1:7,1:7:15.05:379,15,0	0/1:6,0:5:34.52:98,0,35
chr10	41224451	.	AGT	A	1570.38	PASS	AB=0.832;AC=33;AF=0.660;AN=50;BaseQRankSum=0.163;DP=650;FS=25.626;HRun=0;HaplotypeScore=89.7583;InbreedingCoeff=0.4168;MQ=58.93;MQ0=20;MQRankSum=0.398;QD=3.83;ReadPosRankSum=0.118;VQSLOD=0.7645;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:28,2:30:0.55:144,0,1	0/0:9,0:9:10.52:0,11,85	./.	./.	0/0:23,0:22:8.55:0,9,102	1/1:14,0:21:16.22:73,16,0	0/0:26,0:25:2.84:0,3,9	./.	1/1:16,0:18:5.68:28,6,0	0/1:19,4:23:9.57:94,0,10	1/1:9,6:15:3.01:32,3,0	1/1:17,4:22:14.87:142,15,0	0/1:14,0:19:2.96:9,0,3	0/0:24,0:25:23.55:0,24,223	1/1:18,4:23:18.51:171,19,0	0/0:14,0:21:5.99:0,6,50	0/0:15,0:32:12.01:0,12,122	1/1:14,1:16:17.54:133,18,0	1/1:23,1:24:5.85:46,6,0	1/1:12,1:17:5.90:62,6,0	0/1:43,5:48:28.30:52,0,28	1/1:8,0:13:6.92:31,7,0	1/1:16,0:17:11.27:69,11,0	1/1:18,5:23:31.26:259,31,0	1/1:14,0:18:11.22:81,11,0	1/1:18,0:19:2.01:12,2,0	1/1:14,9:23:20.70:206,21,0	0/1:7,3:10:33.37:91,0,33
chr10	41225443	.	ATCTG	A	2987.65	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=3.508;DP=800;FS=6.518;HRun=0;HaplotypeScore=165.5367;InbreedingCoeff=0.7377;MQ=61.61;MQ0=40;MQRankSum=0.475;QD=10.41;ReadPosRankSum=-1.250;VQSLOD=2.6482;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:31:44.86:0,45,355	0/0:12,0:11:29.95:0,30,246	0/0:24,0:22:23.96:0,24,209	0/0:21,0:20:4.34:0,4,96	0/0:35,0:34:62.66:0,63,511	1/1:21,0:20:24.12:302,24,0	1/1:16,0:14:22.31:167,22,0	1/1:31,12:41:59.74:489,60,0	0/0:25,0:21:47.89:0,48,389	0/0:32,0:32:79.67:0,80,690	0/0:27,0:24:47.60:0,48,377	0/0:26,0:26:50.90:0,51,414	0/0:39,0:37:61.89:0,62,501	0/0:23,0:21:44.87:0,45,361	0/0:29,0:27:47.93:0,48,395	0/0:32,0:32:47.88:0,48,392	0/0:25,0:24:46.15:0,46,368	0/1:21,0:17:3.95:4,0,217	1/1:21,0:20:8.92:208,9,0	1/1:35,0:34:56.77:451,57,0	0/1:28,0:25:17.41:253,0,17	0/0:32,0:31:30.89:0,31,434	0/0:30,0:29:53.55:0,54,411	0/0:40,0:38:47.73:0,48,395	0/0:26,0:24:53.93:0,54,449	1/1:39,0:32:63.83:508,64,0	1/1:38,0:37:62.71:490,63,0	0/1:24,0:25:35.64:314,0,36
chr10	41225463	.	GTCTGTCTATCTATCTATCTATCTA	G	4055.34	PASS	AB=0.867;AC=15;AF=0.268;AN=56;BaseQRankSum=2.837;DP=780;FS=6.123;HRun=0;HaplotypeScore=405.0108;InbreedingCoeff=0.6904;MQ=51.21;MQ0=67;MQRankSum=0.465;QD=16.62;ReadPosRankSum=-1.805;VQSLOD=0.7269;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:31:51:0,51,1113	0/0:11,0:10:29.98:0,30,583	0/0:15,0:13:23.96:0,24,209	0/0:10,0:9:4.34:0,4,96	0/0:48,0:45:62.69:0,63,899	1/1:20,0:19:9.93:284,10,0	1/1:15,0:10:20.89:162,21,0	1/1:35,0:31:59.42:489,59,0	0/0:30,0:25:59.16:0,59,738	0/0:38,0:35:97.82:0,98,2728	0/0:21,0:18:50.63:0,51,687	0/0:21,0:21:47.98:0,48,497	0/0:32,0:30:74.94:0,75,1263	0/0:22,0:20:44.68:0,45,483	0/0:28,0:26:57.07:0,57,2274	0/0:28,0:27:59.85:0,60,909	0/0:24,0:23:47.42:0,47,618	0/0:26,0:21:12.24:0,12,1854	0/1:7,14:19:99:351,0,209	1/1:21,10:30:56.84:536,57,0	0/1:30,0:27:99:291,0,502	0/0:36,0:33:49.89:0,50,707	0/0:40,0:38:53.65:0,54,754	0/0:40,0:38:27.32:0,27,610	0/0:30,0:25:69.06:0,69,2077	1/1:17,26:34:80.63:982,81,0	1/1:25,0:24:62.72:608,63,0	0/1:24,0:20:99:353,0,556
chr10	41225467	.	GTCTATCTATCTATCTA	G	1448.59	PASS	AB=1.000;AC=19;AF=0.396;AN=48;BaseQRankSum=3.481;DP=777;FS=10.650;HRun=0;HaplotypeScore=321.0920;InbreedingCoeff=0.1291;MQ=50.74;MQ0=69;MQRankSum=2.336;QD=3.93;ReadPosRankSum=-1.820;VQSLOD=0.8682;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:38,0:33:51.86:52,0,148	0/1:12,0:11:30.86:31,0,133	./.	./.	0/0:33,17:47:2.99:0,3,25	./.	./.	0/0:35,0:31:0:0,0,0	0/1:31,0:26:29.87:94,0,30	0/0:38,0:36:33.11:0,33,1291	0/0:24,0:21:15.05:0,15,583	1/1:21,0:21:3.01:91,3,0	0/1:32,0:30:28.44:147,0,28	1/1:23,0:21:2.85:48,3,0	0/0:28,0:26:33.11:0,33,1366	0/1:29,0:28:64.61:276,0,65	0/1:24,0:24:36.61:160,0,37	0/0:25,0:20:26.12:0,26,1033	0/1:21,0:19:99:108,0,140	1/1:30,0:29:2.96:19,3,0	0/0:28,0:25:8.98:0,9,303	0/0:26,0:32:2.80:0,3,25	0/0:26,13:37:2.55:0,3,18	1/1:39,0:37:11.92:276,12,0	0/0:31,0:26:33.10:0,33,890	1/1:42,0:32:17.07:240,17,0	1/1:26,0:25:2.85:59,3,0	0/0:24,0:19:5.97:0,6,398
chr10	41225920	.	A	ATGTGTGTG	894.36	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=4.291;DP=686;FS=0.000;HRun=0;HaplotypeScore=193.9781;InbreedingCoeff=-0.0283;MQ=69.20;MQ0=3;MQRankSum=-2.368;QD=3.02;ReadPosRankSum=-3.375;VQSLOD=1.9709;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:87.23:0,87,1677	0/0:13,0:13:33.10:0,33,666	0/0:23,0:19:54.11:0,54,871	0/0:43,0:32:83.06:0,83,1276	0/1:32,0:32:39.59:40,0,618	1/1:2,11:15:5.96:108,6,0	1/1:20,0:19:19.21:225,19,0	0/1:33,0:33:99:315,0,759	0/0:22,0:22:51.15:0,51,840	0/0:34,0:34:90.06:0,90,1706	0/0:26,0:25:60.62:0,61,1146	0/1:31,0:30:26.71:27,0,500	0/0:22,0:22:38.76:0,39,652	0/1:13,0:13:21.94:22,0,217	0/0:32,0:32:96.27:0,96,1909	0/1:25,0:25:64.01:64,0,374	0/1:35,0:35:18.79:19,0,935	0/0:23,0:23:63.16:0,63,1322	0/1:11,0:11:23.78:24,0,162	0/1:17,0:16:99:134,0,209	0/0:24,0:24:25.66:0,26,501	0/0:29,0:29:57.18:0,57,861	0/1:17,0:17:11.29:11,0,251	0/0:24,0:24:27.91:0,28,318	0/0:29,0:29:81.24:0,81,1779	0/1:26,0:24:46.58:47,0,599	0/1:21,0:20:26.11:26,0,268	0/0:6,0:6:13.20:0,13,140
chr10	41226045	.	T	TA	2517.35	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=11.187;DP=669;FS=3.791;HRun=9;HaplotypeScore=89.5906;InbreedingCoeff=0.9966;MQ=76.74;MQ0=0;MQRankSum=0.622;QD=23.75;ReadPosRankSum=-0.187;VQSLOD=4.0526;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,119,1021	0/0:11,0:11:29.97:0,30,257	0/0:22,0:22:30.40:0,30,313	0/0:11,0:11:20.76:0,21,198	1/1:2,21:23:57.11:614,57,0	0/0:24,0:24:62.98:0,63,547	0/0:23,0:23:59.97:0,60,516	0/0:28,0:28:71.96:0,72,623	0/0:27,0:27:65.96:0,66,569	0/0:21,0:23:55.06:0,55,453	0/0:20,0:20:50.97:0,51,442	0/0:31,0:31:80.96:0,81,699	0/0:27,0:27:74.98:0,75,651	1/1:1,18:19:25.09:505,25,0	0/0:28,0:28:74.90:0,75,640	1/1:7,17:24:34.59:557,35,0	1/1:4,36:39:70.20:1002,70,0	0/0:11,0:11:23.99:0,24,208	0/0:19,0:19:47.97:0,48,416	0/0:25,1:27:46.80:0,47,614	0/0:31,2:33:23.59:0,24,663	0/0:21,0:21:59.97:0,60,518	0/0:23,0:23:56.98:0,57,495	0/0:27,0:27:59.96:0,60,521	0/0:27,0:27:71.24:0,71,620	0/0:22,0:22:62.99:0,63,546	0/0:24,0:24:68.98:0,69,599	0/0:10,0:10:29.99:0,30,260
chr10	41226381	.	GAAA	G	5499.01	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=15.129;DP=815;FS=1.707;HRun=3;HaplotypeScore=132.7149;InbreedingCoeff=0.9981;MQ=65.67;MQ0=3;MQRankSum=-7.398;QD=45.45;ReadPosRankSum=2.663;VQSLOD=4.6151;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,163,3890	0/0:11,0:11:33.11:0,33,807	0/0:28,0:23:66.23:0,66,1604	0/0:21,0:18:23.22:0,23,1180	1/1:2,27:29:62.79:1141,63,0	0/0:13,0:13:33.11:0,33,813	0/0:29,0:29:81.22:0,81,1875	0/0:28,0:28:84.28:0,84,2027	0/0:25,1:26:22.49:0,22,1737	0/0:36,0:36:99:0,108,2603	0/0:27,0:27:81.28:0,81,1959	0/0:31,0:31:90.29:0,90,2167	0/0:37,0:37:99:0,108,2599	1/1:1,37:38:28.38:1768,28,0	0/0:34,0:34:99:0,102,2510	1/1:3,22:25:46.22:1197,46,0	1/1:1,28:29:74.94:1392,75,0	0/0:21,0:21:63.21:0,63,1470	0/0:34,0:33:99:0,99,2351	0/0:29,0:29:87.30:0,87,2061	0/0:53,0:52:99:0,160,3822	0/0:28,0:28:84.29:0,84,2015	0/0:23,0:23:69.24:0,69,1646	0/0:35,0:35:99:0,105,2497	0/0:32,0:32:92.95:0,93,2244	0/0:27,0:27:81.28:0,81,1989	0/0:24,0:24:72.25:0,72,1752	0/0:12,0:12:36.12:0,36,887
chr10	41226433	.	CCTT	C	7153.19	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=18.250;DP=817;FS=4.459;HRun=0;HaplotypeScore=138.9657;InbreedingCoeff=0.9971;MQ=82.14;MQ0=0;MQRankSum=-6.139;QD=38.67;ReadPosRankSum=1.651;VQSLOD=5.8321;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:58:99:0,172,3795	0/0:7,0:7:21.07:0,21,478	0/0:24,0:24:63.18:0,63,1373	0/0:24,0:24:69.23:0,69,1523	1/1:7,24:31:47.75:813,48,0	1/1:0,18:18:45.15:754,45,0	1/1:1,30:31:78.20:1296,78,0	0/0:33,0:33:93.32:0,93,2121	0/0:27,1:28:33.19:0,33,1764	0/0:42,0:42:99:0,120,2721	0/0:21,0:21:60.20:0,60,1303	0/0:26,0:26:78.27:0,78,1748	0/0:36,0:36:99:0,108,2386	1/1:7,37:44:99:1742,111,0	0/0:37,0:37:99:0,111,2445	1/1:3,28:31:18.09:1349,18,0	1/1:3,27:30:72.22:1199,72,0	0/0:20,0:20:60.21:0,60,1375	0/0:28,0:28:78.26:0,78,1715	0/0:25,0:25:75.24:0,75,1674	0/0:37,0:37:99:0,105,2369	0/0:29,0:29:87.30:0,87,1986	0/0:24,0:24:69.24:0,69,1582	0/0:35,0:35:99:0,102,2244	0/0:33,0:33:93.30:0,93,2013	0/0:28,0:28:84.28:0,84,1885	0/0:29,0:29:81.28:0,81,1843	0/0:8,0:8:24.08:0,24,554
chr10	41227667	.	T	TTC	507.78	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=10.785;DP=520;FS=4.129;HRun=0;HaplotypeScore=102.2901;InbreedingCoeff=0.5876;MQ=57.52;MQ0=10;MQRankSum=1.563;QD=5.08;ReadPosRankSum=2.104;VQSLOD=2.8886;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:48.81:0,49,813	0/0:8,0:8:24.08:0,24,365	0/0:26,0:10:26.27:0,26,389	0/0:25,0:14:33.05:0,33,461	1/1:14,1:15:19.40:91,19,0	0/1:20,0:19:92.11:111,0,92	0/1:18,0:17:99:104,0,138	0/0:36,0:36:93.27:0,93,1337	0/0:16,0:16:37.27:0,37,552	0/0:14,0:14:39.12:0,39,577	0/0:23,0:22:57.09:0,57,802	0/0:11,0:11:33.11:0,33,492	0/0:13,0:13:33.11:0,33,488	1/1:7,3:10:25.52:273,26,0	0/0:13,0:13:39.09:0,39,544	1/1:15,0:15:10.91:62,11,0	0/1:22,0:21:21.57:22,0,31	0/0:21,0:20:54.12:0,54,795	0/0:18,0:18:51.17:0,51,772	0/0:22,0:21:63.21:0,63,941	0/0:15,0:13:36.12:0,36,543	0/0:23,0:22:60.20:0,60,900	0/0:25,0:25:65.55:0,66,969	0/0:22,0:21:51.98:0,52,718	0/0:16,0:16:45.15:0,45,686	0/0:25,0:25:75.18:0,75,1060	0/0:11,0:11:33.11:0,33,498	0/0:13,0:13:38.72:0,39,556
chr10	41228514	.	GTGTC	G	9029.16	PASS	AB=0.655;AC=33;AF=0.589;AN=56;BaseQRankSum=9.256;DP=607;FS=0.000;HRun=0;HaplotypeScore=169.2432;InbreedingCoeff=0.9076;MQ=57.40;MQ0=8;MQRankSum=-3.005;QD=24.54;ReadPosRankSum=3.731;VQSLOD=4.3650;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,24:32:57.18:929,57,0	0/0:9,0:9:18.06:0,18,400	0/0:41,0:26:42.14:0,42,930	0/0:34,0:18:24.53:0,25,466	1/1:6,9:15:12.04:196,12,0	1/1:4,13:17:36.12:588,36,0	1/1:6,14:20:33.11:539,33,0	1/1:12,11:24:36.05:489,36,0	0/0:29,0:29:63.45:0,63,1406	0/0:24,0:23:57.16:0,57,1335	0/0:16,1:17:20.73:0,21,428	1/1:2,21:22:54.17:870,54,0	0/0:17,1:18:30.10:0,30,712	1/1:7,19:26:39.13:636,39,0	0/0:28,0:28:38.81:0,39,915	1/1:3,17:20:36.12:583,36,0	1/1:4,26:29:60.20:977,60,0	0/0:6,0:6:14.97:0,15,306	1/1:17,9:28:29.65:423,30,0	1/1:5,9:14:24.08:392,24,0	1/1:7,17:24:15.05:245,15,0	0/0:14,0:13:21.07:0,21,511	1/1:7,4:11:11.93:196,12,0	1/1:8,20:28:32.56:534,33,0	0/0:18,0:18:36.12:0,36,876	0/1:9,10:19:36.91:503,0,37	1/1:11,16:27:42.14:684,42,0	1/1:4,5:9:15.05:245,15,0
chr10	41228760	.	GGT	G	1231.27	PASS	AB=0.891;AC=29;AF=0.558;AN=52;BaseQRankSum=7.465;DP=658;FS=11.307;HRun=0;HaplotypeScore=122.9244;InbreedingCoeff=0.1219;MQ=66.81;MQ0=18;MQRankSum=-2.641;QD=2.68;ReadPosRankSum=1.365;VQSLOD=2.0057;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:20,19:43:6.57:302,0,7	0/1:9,1:8:24.15:24,0,80	./.	./.	1/1:6,1:17:11.35:60,11,0	1/1:17,0:28:15.09:81,15,0	1/1:16,0:28:11.69:57,12,0	0/0:21,0:18:6.01:0,6,72	0/0:19,1:19:23.52:0,24,437	0/1:23,2:25:99:105,0,359	0/0:13,0:14:6.92:0,7,254	1/1:7,0:18:8.52:42,9,0	0/1:16,0:16:9.08:9,0,291	1/1:10,0:21:28.48:143,28,0	0/1:23,2:25:33.25:33,0,331	1/1:9,0:21:25.64:128,26,0	1/1:16,2:24:22.86:116,23,0	0/1:20,4:26:99:101,0,525	0/1:19,1:24:4.26:4,0,217	0/0:22,0:25:29.31:0,29,311	0/0:29,1:34:6.02:0,6,378	0/1:20,5:25:66.38:66,0,328	1/1:5,0:11:8.52:41,9,0	1/1:18,0:24:5.68:28,6,0	0/1:23,3:27:30.24:30,0,392	0/1:15,1:22:3.13:3,0,216	0/1:14,0:21:31.79:32,0,83	0/0:10,0:12:20.92:0,21,202
chr10	41230154	.	GAC	G	1781.66	PASS	AB=0.870;AC=24;AF=0.462;AN=52;BaseQRankSum=1.482;DP=621;FS=3.326;HRun=0;HaplotypeScore=103.7475;InbreedingCoeff=0.6018;MQ=65.18;MQ0=10;MQRankSum=3.057;QD=5.55;ReadPosRankSum=4.304;VQSLOD=2.9166;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:34,6:41:47.15:47,0,321	0/1:10,0:10:23.04:23,0,80	./.	./.	0/0:11,0:25:18.62:0,19,142	0/0:18,0:21:2.57:0,3,25	0/0:26,0:26:12.03:0,12,149	0/0:29,0:29:38.95:0,39,421	1/1:8,8:17:20.89:212,21,0	1/1:14,0:26:28.01:139,28,0	1/1:14,0:19:8.52:42,9,0	1/1:3,6:9:14.82:165,15,0	1/1:6,6:13:20.89:213,21,0	0/0:11,0:20:12.01:0,12,122	1/1:8,0:15:18.52:114,19,0	0/0:11,0:16:30.04:0,30,332	0/1:28,1:31:34.93:35,0,471	1/1:15,0:31:28.41:140,28,0	0/0:13,0:12:12.86:0,13,104	0/0:10,0:14:5.91:0,6,52	0/0:17,0:22:8.65:0,9,92	1/1:24,11:36:27.37:279,27,0	1/1:12,5:19:17.88:179,18,0	0/1:19,14:35:6.29:320,0,6	1/1:12,0:18:14.20:70,14,0	0/0:14,1:22:5.71:0,6,319	0/0:17,0:25:24.47:0,24,220	0/0:6,0:8:13.24:0,13,105
chr10	41231605	.	GCA	G	1293.72	PASS	AB=0.875;AC=31;AF=0.596;AN=52;BaseQRankSum=3.036;DP=614;FS=0.000;HRun=0;HaplotypeScore=88.4982;InbreedingCoeff=0.2579;MQ=59.06;MQ0=18;MQRankSum=-1.350;QD=3.46;ReadPosRankSum=0.861;VQSLOD=1.9631;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:36,1:37:13.81:14,0,379	0/1:6,4:10:62.80:63,0,75	./.	./.	1/1:7,0:11:1.25:3,1,0	1/1:7,0:16:4.92:51,5,0	1/1:16,0:26:14.34:77,14,0	1/1:20,0:20:3:30,3,0	0/0:13,0:29:12.21:0,12,91	0/1:21,5:26:70.89:71,0,214	0/0:17,0:17:14.98:0,15,171	0/0:15,0:28:11.97:0,12,98	0/0:8,0:16:17.99:0,18,154	1/1:9,0:17:20.03:103,20,0	0/1:23,0:23:48.17:48,0,323	1/1:5,0:8:5.68:28,6,0	1/1:18,0:29:14.16:69,14,0	0/1:19,1:21:48.12:48,0,236	0/1:10,3:13:28.11:94,0,28	1/1:12,4:16:11.36:87,11,0	1/1:16,10:29:4.64:188,5,0	0/0:27,0:26:31.34:0,31,236	0/0:6,0:17:24.01:0,24,239	0/0:19,1:43:2.96:0,3,215	0/1:23,1:27:72.27:72,0,343	1/1:12,7:20:14.87:144,15,0	1/1:8,2:12:11.53:90,12,0	1/1:3,8:11:0.94:188,1,0
chr10	41234713	.	C	CA	4625.32	PASS	AB=0.564;AC=11;AF=0.196;AN=56;BaseQRankSum=-14.501;DP=644;FS=8.032;HRun=6;HaplotypeScore=62.7859;InbreedingCoeff=0.8772;MQ=73.78;MQ0=0;MQRankSum=-0.836;QD=29.84;ReadPosRankSum=1.926;VQSLOD=5.5006;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:75.80:0,76,975	0/0:11,0:11:30.07:0,30,306	0/0:24,0:24:52.75:0,53,495	0/0:26,0:26:4.16:0,4,346	1/1:2,20:22:54.17:679,54,0	1/1:2,17:19:39.12:491,39,0	1/1:0,24:24:54.17:679,54,0	0/0:32,0:32:78.04:0,78,763	0/0:22,0:22:63.06:0,63,614	0/0:13,0:13:33.05:0,33,327	0/0:15,0:15:42.08:0,42,421	0/0:13,0:13:36.03:0,36,355	0/0:15,0:15:35.75:0,36,347	1/1:1,25:26:72.23:906,72,0	0/0:24,0:23:69.14:0,69,697	0/1:5,17:22:7.05:550,0,7	1/1:2,40:42:99:1321,105,0	0/0:27,0:27:78.16:0,78,788	0/0:20,0:20:57.12:0,57,576	0/0:19,0:19:57.11:0,57,573	0/0:22,0:21:63.14:0,63,643	0/0:27,0:27:69.12:0,69,690	0/0:25,0:25:72.09:0,72,716	0/0:31,0:31:87.14:0,87,871	0/0:18,0:18:54.09:0,54,538	0/0:28,0:28:66.13:0,66,664	0/0:31,0:31:87.20:0,87,887	0/0:9,0:9:24.05:0,24,245
chr10	41236543	.	T	TC	1640.10	PASS	AB=0.698;AC=15;AF=0.268;AN=56;BaseQRankSum=-2.207;DP=603;FS=0.821;HRun=0;HaplotypeScore=101.3512;InbreedingCoeff=0.5712;MQ=57.45;MQ0=26;MQRankSum=3.984;QD=7.42;ReadPosRankSum=3.954;VQSLOD=3.5557;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:19:55.67:0,56,447	0/0:10,0:10:29.88:0,30,251	0/0:59,0:7:7.15:0,7,97	0/0:40,0:14:26.68:0,27,189	0/0:24,0:23:42.38:0,42,273	1/1:23,0:22:40.27:286,40,0	1/1:14,1:14:24.80:152,25,0	0/1:12,16:28:0.13:250,0,0	0/0:18,0:18:40.74:0,41,347	0/0:18,0:18:47.96:0,48,381	0/0:16,0:16:38.87:0,39,324	0/0:15,0:15:36.84:0,37,219	0/0:27,0:27:50.13:0,50,391	0/0:12,0:12:33.85:0,34,227	0/0:16,0:16:30.37:0,30,280	0/0:21,0:20:32.71:0,33,230	0/0:17,0:14:36.46:0,36,229	0/0:21,0:20:19.41:0,19,268	1/1:4,18:24:10.99:344,11,0	1/1:9,21:33:17.16:292,17,0	0/1:7,8:14:11.95:63,0,12	0/1:19,1:19:14.41:14,0,196	0/0:15,0:15:30.36:0,30,233	0/0:10,0:10:20.89:0,21,121	0/0:22,0:21:41.99:0,42,370	1/1:7,12:19:2.66:250,3,0	0/1:8,16:28:65.20:65,0,81	0/1:8,7:16:5:102,0,5
chr10	41237194	.	TGCC	T	17739.80	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=14.099;DP=494;FS=1.244;HRun=0;HaplotypeScore=114.4668;InbreedingCoeff=0.9930;MQ=78.92;MQ0=0;MQRankSum=-6.026;QD=48.60;ReadPosRankSum=1.885;VQSLOD=7.0622;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:45.14:0,45,1057	0/0:5,0:5:15.04:0,15,321	0/0:21,0:21:48.06:0,48,1207	0/0:14,0:14:20.03:0,20,717	1/1:0,21:21:48.08:779,48,0	1/1:0,15:15:33.11:590,33,0	1/1:0,13:13:33.11:601,33,0	1/1:0,33:33:99:1770,99,0	1/1:0,17:17:42.14:782,42,0	1/1:0,16:16:48.16:822,48,0	1/1:0,18:18:42.14:762,42,0	0/0:23,0:23:69.24:0,69,1700	1/1:0,15:15:42.14:782,42,0	1/1:0,7:7:18.06:331,18,0	1/1:0,9:9:21.07:391,21,0	1/1:0,12:12:33.11:598,33,0	1/1:0,19:19:51.17:949,51,0	1/1:0,8:8:21.07:391,21,0	1/1:0,28:28:84.29:1538,84,0	1/1:0,32:32:90.27:1601,90,0	1/1:0,16:16:39.13:727,39,0	1/1:0,12:12:33.07:572,33,0	0/0:30,0:30:90.30:0,90,2159	0/0:21,0:21:63.19:0,63,1453	1/1:0,12:12:36.12:657,36,0	1/1:0,26:26:78.23:1348,78,0	1/1:1,18:19:48.16:855,48,0	1/1:0,17:17:48.16:894,48,0
chr10	41237323	.	AT	A	4469.47	PASS	AB=0.529;AC=19;AF=0.339;AN=56;BaseQRankSum=-1.084;DP=598;FS=4.111;HRun=8;HaplotypeScore=78.0205;InbreedingCoeff=0.9222;MQ=78.73;MQ0=0;MQRankSum=0.970;QD=23.77;ReadPosRankSum=3.256;VQSLOD=5.7177;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:69.19:0,69,810	0/0:11,0:11:24.07:0,24,290	0/0:13,0:13:30.04:0,30,330	0/0:20,0:19:43:0,43,485	0/0:41,0:41:99:0,114,1352	1/1:3,12:15:36.06:348,36,0	1/1:2,18:20:36.06:348,36,0	0/0:36,0:36:99:0,99,1179	1/1:2,17:19:48.08:464,48,0	1/1:2,17:19:51.08:493,51,0	1/1:1,19:20:57.09:550,57,0	0/0:16,0:16:48.13:0,48,567	1/1:2,16:18:39.06:377,39,0	0/0:15,0:15:36.10:0,36,423	1/1:1,18:19:48.07:464,48,0	0/0:18,0:18:54.17:0,54,652	0/0:18,0:18:51.14:0,51,603	0/1:1,8:9:15.21:153,0,15	0/0:27,0:27:75.21:0,75,885	0/0:34,0:34:90.28:0,90,1087	0/0:20,0:20:54.16:0,54,642	1/1:2,26:28:75.12:724,75,0	0/0:31,0:31:87.25:0,87,1026	0/0:16,0:16:42.13:0,42,507	1/1:0,21:21:57.09:550,57,0	0/0:33,1:34:61.29:0,61,1018	0/0:22,0:21:60.15:0,60,709	0/0:11,0:11:30.09:0,30,362
chr10	41237423	.	AAG	A	5986.95	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=13.601;DP=650;FS=4.724;HRun=0;HaplotypeScore=76.4160;InbreedingCoeff=0.9843;MQ=79.18;MQ0=1;MQRankSum=0.347;QD=36.73;ReadPosRankSum=-2.470;VQSLOD=6.3294;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:66.23:0,66,1175	0/0:5,0:5:15.05:0,15,270	0/0:17,0:17:32.98:0,33,655	0/0:21,0:21:43.39:0,43,807	0/0:33,0:33:99:0,99,1799	0/0:20,0:20:57.20:0,57,1044	0/0:35,0:35:99:0,99,1766	1/1:0,20:20:60.15:819,60,0	0/0:24,0:24:72.23:0,72,1262	0/0:28,0:28:75.26:0,75,1364	0/0:28,0:28:81.28:0,81,1468	0/0:26,0:26:78.24:0,78,1363	0/0:24,0:24:66.20:0,66,1171	0/0:22,0:22:66.23:0,66,1199	0/0:22,0:22:63.22:0,63,1155	0/0:29,0:29:87.30:0,87,1590	0/0:19,0:19:51.17:0,51,928	0/0:11,0:11:33.11:0,33,603	1/1:0,28:28:84.28:1197,84,0	1/1:1,27:28:78.23:1084,78,0	1/1:3,18:21:45.15:645,45,0	0/0:30,0:30:90.31:0,90,1635	0/0:28,0:28:84.27:0,84,1468	0/0:19,0:19:57.18:0,57,1013	0/0:21,0:21:57.20:0,57,1041	1/1:2,21:22:8.17:781,8,0	1/1:2,21:23:54.18:773,54,0	1/1:0,20:20:48.16:688,48,0
chr10	41237872	.	G	GC	14937.22	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=-6.074;DP=659;FS=7.032;HRun=0;HaplotypeScore=76.0752;InbreedingCoeff=0.9954;MQ=82.69;MQ0=0;MQRankSum=-3.316;QD=31.12;ReadPosRankSum=3.825;VQSLOD=4.5954;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,156,1985	0/0:12,0:12:30.09:0,30,401	0/0:21,0:21:59.42:0,59,716	0/0:20,0:19:38.16:0,38,461	1/1:1,1:14:16.14:191,16,0	1/1:0,27:27:66.22:962,66,0	1/1:0,30:30:78.26:1130,78,0	1/1:2,23:25:69:864,69,0	1/1:0,15:15:39.13:569,39,0	1/1:1,28:29:83.67:1064,84,0	1/1:1,21:22:54.18:776,54,0	0/0:30,0:30:90.28:0,90,1221	1/1:0,27:27:57.10:822,57,0	1/1:0,0:20:40.89:239,41,0	1/1:1,22:23:51.17:745,51,0	1/1:1,2:27:52.78:347,53,0	1/1:2,1:25:64.56:411,65,0	1/1:0,8:8:18.06:262,18,0	1/1:2,17:19:50.70:635,51,0	1/1:2,30:32:84.21:1195,84,0	1/1:1,29:30:84.28:1223,84,0	1/1:2,19:21:45.15:656,45,0	0/0:24,0:24:69.18:0,69,893	0/0:19,0:19:57.18:0,57,775	1/1:0,24:24:57.19:832,57,0	1/1:1,24:25:33.31:932,33,0	1/1:5,21:26:54.18:776,54,0	1/1:0,11:11:21.07:306,21,0
chr10	41238305	.	G	GT	18527.76	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=-11.699;DP=610;FS=0.000;HRun=2;HaplotypeScore=58.3230;InbreedingCoeff=0.9977;MQ=80.07;MQ0=0;MQRankSum=-4.787;QD=37.89;ReadPosRankSum=2.140;VQSLOD=5.3924;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:81.25:0,81,1003	0/0:7,0:7:18.01:0,18,205	0/0:15,0:15:45.09:0,45,519	0/0:15,0:15:42.09:0,42,499	1/1:1,35:36:96.24:1334,96,0	1/1:1,27:28:69.23:994,69,0	1/1:2,23:25:63.21:907,63,0	1/1:0,30:30:87.29:1249,87,0	1/1:0,18:18:48.16:691,48,0	1/1:0,19:19:57.16:780,57,0	1/1:2,18:20:48.03:621,48,0	0/0:21,0:21:60.19:0,60,744	1/1:0,24:24:59.73:863,60,0	1/1:4,24:28:35.05:954,35,0	1/1:1,20:21:60.20:864,60,0	1/1:0,20:21:63.21:902,63,0	1/1:0,23:23:66.22:950,66,0	1/1:1,24:25:66.22:950,66,0	1/1:2,20:22:63.21:902,63,0	1/1:1,25:26:66.19:928,66,0	1/1:0,18:18:48.16:691,48,0	1/1:3,18:21:48.12:668,48,0	0/0:17,0:17:45.13:0,45,545	0/0:17,0:17:51.14:0,51,619	1/1:0,18:18:45.08:623,45,0	1/1:0,30:30:87.28:1231,87,0	1/1:0,29:28:78.13:1123,78,0	1/1:0,7:7:21.07:302,21,0
chr10	41242640	.	C	CA	12864.21	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=3.492;DP=601;FS=48.831;HRun=7;HaplotypeScore=99.4318;InbreedingCoeff=0.9967;MQ=92.80;MQ0=0;MQRankSum=-9.113;QD=23.78;ReadPosRankSum=4.254;VQSLOD=1.6984;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,20:22:60.18:716,60,0	0/0:10,0:10:24.03:0,24,232	0/0:28,0:28:57:0,57,535	0/0:22,0:22:51.08:0,51,491	1/1:36,0:36:98.14:692,98,0	1/1:4,22:25:34.21:696,34,0	1/1:2,28:30:75.23:906,75,0	1/1:26,0:26:58.59:346,59,0	1/1:5,23:28:69.17:817,69,0	1/1:4,17:21:54.06:632,54,0	1/1:4,19:23:60.14:707,60,0	1/1:2,14:16:42.13:507,42,0	1/1:2,11:13:36.11:433,36,0	1/1:21,0:21:59.35:400,59,0	1/1:1,10:11:30.09:362,30,0	1/1:15,0:15:38.60:262,39,0	1/1:17,0:17:47.55:332,48,0	1/1:1,9:10:21.06:254,21,0	1/1:29,0:29:67.49:407,67,0	1/1:29,0:29:71.30:492,71,0	1/1:16,0:16:38.57:259,39,0	1/1:0,24:24:69.21:833,69,0	1/1:3,20:23:54.03:652,54,0	1/1:3,19:22:45.14:544,45,0	1/1:4,16:20:42.13:507,42,0	1/1:21,2:23:58.78:389,59,0	1/1:31,0:31:77.34:553,77,0	1/1:9,0:9:23.79:165,24,0
chr10	41242646	.	A	AG	11645.12	PASS	AB=0.993;AC=45;AF=0.804;AN=56;BaseQRankSum=5.594;DP=582;FS=21.314;HRun=0;HaplotypeScore=98.7320;InbreedingCoeff=0.4120;MQ=91.14;MQ0=0;MQRankSum=-8.099;QD=22.06;ReadPosRankSum=7.266;VQSLOD=4.0028;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:21:32.35:183,32,0	0/0:9,0:9:27.08:0,27,362	0/0:24,0:24:65.92:0,66,817	0/0:21,0:21:54.14:0,54,730	1/1:1,36:37:99:1515,105,0	0/1:25,0:24:36.35:128,0,36	1/1:29,0:29:60.85:219,61,0	1/1:0,20:20:60.20:899,60,0	0/1:28,1:29:35.34:183,0,35	0/1:20,0:20:22.51:79,0,23	1/1:21,0:22:24.69:162,25,0	1/1:15,0:15:10.23:96,10,0	1/1:13,0:13:6:83,6,0	1/1:0,22:22:60.20:898,60,0	1/1:10,0:10:24.09:86,24,0	1/1:0,18:18:39.13:584,39,0	1/1:1,21:22:48.16:718,48,0	0/1:12,0:12:44.67:45,0,57	1/1:0,28:28:84.19:1158,84,0	1/1:0,25:25:75.19:1095,75,0	1/1:1,16:17:39.13:584,39,0	1/1:25,0:25:31.45:177,31,0	1/1:21,0:21:21.21:148,21,0	1/1:19,0:19:37.43:139,37,0	0/1:19,0:19:40.35:73,0,40	1/1:2,20:22:64.90:871,65,0	1/1:0,28:28:78.26:1164,78,0	1/1:0,9:9:24.08:359,24,0
chr10	41243642	.	AT	A	5675.97	PASS	AB=0.731;AC=42;AF=0.750;AN=56;BaseQRankSum=5.038;DP=329;FS=47.548;HRun=10;HaplotypeScore=37.9379;InbreedingCoeff=0.7286;MQ=62.55;MQ0=3;MQRankSum=-0.464;QD=20.13;ReadPosRankSum=1.504;VQSLOD=2.2549;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:14:39.11:0,39,431	0/0:1,0:1:3.01:0,3,33	0/0:8,0:6:12.03:0,12,134	0/0:5,0:4:6.01:0,6,64	1/1:4,18:22:44.98:391,45,0	1/1:1,8:9:21:182,21,0	1/1:3,7:10:20.97:182,21,0	1/1:6,20:26:59.98:521,60,0	1/1:1,8:9:23.99:208,24,0	1/1:1,9:9:26.99:234,27,0	1/1:0,12:12:35.99:313,36,0	0/0:8,0:8:12.03:0,12,133	1/1:0,5:5:15:130,15,0	1/1:2,3:5:5.99:52,6,0	1/1:0,5:5:12:104,12,0	1/1:0,6:6:18:156,18,0	1/1:6,12:18:29.99:260,30,0	1/1:3,13:16:38.99:339,39,0	1/1:3,13:17:10.84:306,11,0	1/1:2,22:24:62.98:547,63,0	0/1:2,7:9:9.07:158,0,9	1/1:1,8:9:23.98:208,24,0	0/1:8,1:9:8.01:8,0,148	0/0:10,0:10:27.07:0,27,299	1/1:0,9:9:26.99:234,27,0	1/1:1,19:20:56.97:491,57,0	1/1:2,15:17:44.99:391,45,0	1/1:5,10:15:29.99:260,30,0
chr10	41243727	.	T	TC	1691.74	PASS	AC=36;AF=0.818;AN=44;BaseQRankSum=1.836;DP=199;FS=0.000;HRun=5;HaplotypeScore=18.2881;InbreedingCoeff=0.5366;MQ=24.25;MQ0=102;MQRankSum=-3.173;QD=11.28;ReadPosRankSum=0.687;VQSLOD=-0.1007;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	0/0:3,0:1:3.01:0,3,32	./.	./.	1/1:8,6:8:15.05:196,15,0	1/1:4,2:4:6.02:79,6,0	./.	1/1:10,4:6:9.03:118,9,0	./.	1/1:1,6:6:12.04:158,12,0	1/1:4,3:4:9.03:118,9,0	0/0:7,0:4:6.02:0,6,64	1/1:4,5:5:15.05:197,15,0	1/1:2,3:3:9.03:118,9,0	1/1:5,1:2:3.01:37,3,0	1/1:4,3:3:9.03:114,9,0	1/1:6,1:4:6.01:68,6,0	1/1:6,1:4:3.01:39,3,0	1/1:5,2:4:6.02:76,6,0	1/1:5,7:8:9.03:114,9,0	1/1:8,1:2:3.01:39,3,0	1/1:12,2:2:6.02:79,6,0	0/0:11,0:7:15.04:0,15,161	0/0:8,0:6:12.02:0,12,121	1/1:5,1:1:3.01:39,3,0	1/1:1,4:4:12.04:158,12,0	1/1:5,3:3:6.02:79,6,0	./.
chr10	41247749	.	T	TG	6121.99	PASS	AB=0.524;AC=31;AF=0.554;AN=56;BaseQRankSum=-9.422;DP=528;FS=10.042;HRun=9;HaplotypeScore=67.1637;InbreedingCoeff=0.8997;MQ=72.43;MQ0=0;MQRankSum=0.382;QD=20.97;ReadPosRankSum=0.294;VQSLOD=5.1912;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:95.76:0,96,803	0/0:10,0:10:26.99:0,27,234	0/0:17,0:16:6.80:0,7,134	0/0:25,0:24:35.11:0,35,262	1/1:7,9:17:20.82:198,21,0	0/0:18,0:18:34.10:0,34,173	0/0:22,0:22:45.15:0,45,229	1/1:6,8:14:20.96:204,21,0	0/0:19,0:19:53.90:0,54,457	1/1:5,10:15:4.02:273,4,0	1/1:2,10:12:18.05:199,18,0	0/0:23,0:23:30.92:0,31,443	0/0:15,0:15:44.97:0,45,387	1/1:3,18:21:48.13:529,48,0	1/1:5,17:22:33.09:365,33,0	1/1:2,14:16:35.75:398,36,0	1/1:6,23:29:45.97:718,46,0	1/1:3,21:25:47.30:539,47,0	1/1:4,8:12:24.06:265,24,0	1/1:1,14:15:33.05:352,33,0	1/1:2,27:30:72.06:776,72,0	0/0:10,0:10:23.97:0,24,205	0/0:10,0:10:17.97:0,18,156	0/0:26,0:28:72.99:0,73,600	0/1:1,10:11:5:178,0,5	1/1:10,18:28:48.12:521,48,0	1/1:3,17:20:48.09:517,48,0	1/1:2,3:5:9:89,9,0
chr10	41248381	.	TC	T	973.12	PASS	AC=4;AF=0.074;AN=54;BaseQRankSum=-1.568;DP=552;FS=5.401;HRun=6;HaplotypeScore=85.9435;InbreedingCoeff=0.9992;MQ=80.05;MQ0=0;MQRankSum=-0.780;QD=23.73;ReadPosRankSum=0.535;VQSLOD=3.0164;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:93.30:0,93,1217	0/0:11,0:11:33.11:0,33,429	0/0:23,0:23:60.17:0,60,752	0/0:12,0:12:27.09:0,27,346	0/0:23,0:23:63.18:0,63,795	1/1:0,17:17:51.13:546,51,0	1/1:2,22:24:51.13:548,51,0	0/0:22,0:22:51.14:0,51,639	0/0:22,0:22:54.18:0,54,711	0/0:16,0:16:42.07:0,42,528	0/0:19,0:19:51.17:0,51,667	0/0:19,0:19:57.14:0,57,730	0/0:19,0:19:51.15:0,51,656	0/0:24,0:24:66.17:0,66,847	0/0:20,0:20:51.12:0,51,639	0/0:23,0:23:66.21:0,66,868	0/0:25,0:25:69.22:0,69,900	0/0:18,0:18:48.16:0,48,630	0/0:24,0:24:63.19:0,63,813	0/0:17,0:17:45.15:0,45,589	0/0:34,0:34:90.21:0,90,1161	0/0:13,0:13:33.11:0,33,433	0/0:16,0:16:48.15:0,48,623	0/0:19,0:19:54.09:0,54,686	0/0:21,0:21:63.19:0,63,811	0/0:18,0:18:54.13:0,54,688	0/0:18,0:18:48.16:0,48,624	./.
chr10	41248437	.	A	ATGGGGCTGGGGATTTAGCTCAG	11000.67	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=4.567;DP=537;FS=1.930;HRun=0;HaplotypeScore=287.4560;InbreedingCoeff=0.9143;MQ=68.03;MQ0=5;MQRankSum=-10.061;QD=53.14;ReadPosRankSum=-4.873;VQSLOD=3.2255;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:78.27:0,78,4083	0/0:5,0:5:6.02:0,6,349	0/0:19,0:19:15.05:0,15,432	0/0:15,0:15:6.01:0,6,148	1/1:17,0:17:6.02:434,6,0	0/0:19,0:18:33.11:0,33,1857	0/0:22,0:22:36.12:0,36,1965	1/1:28,0:26:27.06:1154,27,0	0/0:21,0:21:57.20:0,57,3042	0/0:17,0:17:36.12:0,36,1684	0/0:15,0:15:33.10:0,33,1470	0/0:18,0:18:36.12:0,36,1826	0/0:20,0:20:33.07:0,33,1422	1/1:15,1:15:15.03:935,15,0	0/0:17,0:17:32.93:0,33,1661	1/1:24,0:23:12.02:585,12,0	1/1:17,2:17:12:776,12,0	0/0:18,0:17:33.11:0,33,1790	1/1:13,2:14:18.06:1084,18,0	1/1:20,0:20:18.05:1247,18,0	1/1:22,0:20:9.03:713,9,0	0/0:17,0:17:45.14:0,45,1960	0/0:19,0:19:33.11:0,33,1555	0/0:28,0:27:75.26:0,75,4233	0/0:18,0:18:36.12:0,36,1885	1/1:17,1:18:21.07:1752,21,0	1/1:23,1:24:24.08:1708,24,0	1/1:2,2:4:6.01:612,6,0
chr10	41248525	.	CAAAAAAA	C	4922.69	PASS	AB=0.682;AC=29;AF=0.518;AN=56;BaseQRankSum=7.753;DP=501;FS=9.317;HRun=19;HaplotypeScore=138.2972;InbreedingCoeff=0.3500;MQ=36.54;MQ0=13;MQRankSum=-4.756;QD=14.48;ReadPosRankSum=6.681;VQSLOD=-0.6468;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:37:87.14:0,87,1580	0/0:7,0:7:15.05:0,15,380	0/0:8,0:1:3.01:0,3,87	0/0:6,0:3:1.61:0,2,130	0/0:12,0:27:19.99:0,20,179	1/1:3,2:16:33:474,33,0	1/1:3,0:15:36.01:479,36,0	0/1:16,0:28:74.27:148,0,74	1/1:7,0:15:23.60:171,24,0	1/1:7,14:23:23.95:610,24,0	1/1:6,10:16:20.03:347,20,0	0/0:9,0:12:33.02:0,33,465	1/1:9,8:15:21.81:412,22,0	0/1:7,0:16:3.95:4,0,99	1/1:10,13:23:21.33:547,21,0	0/0:8,0:16:15.50:0,15,190	0/1:9,0:19:5.35:5,0,163	1/1:2,7:8:5.90:164,6,0	0/1:7,1:9:26.97:62,0,27	0/1:11,1:31:19.12:309,0,19	0/1:4,0:7:5.28:14,0,5	0/1:8,19:27:25.11:528,0,25	0/0:15,0:23:60.21:0,60,1538	0/0:9,0:18:32.42:0,32,519	0/1:12,9:20:1.72:220,0,2	1/1:6,0:15:6.72:134,7,0	1/1:8,4:19:9.56:264,10,0	0/1:5,0:4:11.63:31,0,12
chr10	41248538	.	AAAAAAAG	A	3196.93	PASS	AB=0.983;AC=22;AF=0.393;AN=56;BaseQRankSum=11.295;DP=504;FS=0.000;HRun=0;HaplotypeScore=141.0848;InbreedingCoeff=-0.1463;MQ=44.76;MQ0=8;MQRankSum=-8.661;QD=9.60;ReadPosRankSum=11.087;VQSLOD=0.7009;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,101,1745	0/0:5,0:5:15.05:0,15,290	0/0:18,0:6:17.90:0,18,265	0/0:7,0:3:8.92:0,9,159	0/0:24,0:24:20.56:0,21,101	0/1:22,0:22:93.51:287,0,94	1/1:14,0:14:14.52:344,15,0	0/1:33,0:32:84.10:84,0,208	0/1:15,0:15:9.19:139,0,9	0/1:25,1:26:99:317,0,155	0/1:17,0:17:99:203,0,102	0/0:15,0:14:36.03:0,36,429	0/1:14,2:15:50.07:330,0,50	0/1:13,0:13:0.32:0,0,53	0/1:19,3:22:8.53:380,0,9	0/0:18,0:17:25.40:0,25,171	0/1:19,0:19:14.82:15,0,145	0/1:9,0:8:11.72:100,0,12	0/1:11,0:11:35.76:36,0,114	1/1:27,0:26:14.02:234,14,0	0/1:6,0:6:5.34:24,0,5	0/1:24,0:24:14.62:360,0,15	0/0:23,0:23:69.21:0,69,1537	0/0:20,0:18:30.71:0,31,472	1/1:15,0:13:6.78:180,7,0	0/1:16,0:16:94.38:113,0,94	0/1:18,0:18:52.33:210,0,52	0/1:10,0:7:11.81:12,0,97
chr10	41248539	.	AAAAAAG	A	3534.19	PASS	AB=0.987;AC=25;AF=0.446;AN=56;BaseQRankSum=13.833;DP=507;FS=4.736;HRun=0;HaplotypeScore=132.1787;InbreedingCoeff=-0.1944;MQ=45.10;MQ0=8;MQRankSum=-10.262;QD=9.35;ReadPosRankSum=11.729;VQSLOD=0.3735;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,100,1349	0/0:5,0:5:14.88:0,15,217	0/0:18,0:6:17.90:0,18,228	0/0:7,0:3:9:0,9,140	0/1:23,0:23:0.58:64,0,1	0/1:22,0:22:91.87:205,0,92	1/1:14,0:14:14.51:275,15,0	0/1:32,0:31:99:251,0,153	0/1:14,2:16:35.59:251,0,36	0/1:26,0:26:99:204,0,170	0/1:17,0:17:85.45:119,0,85	0/0:15,0:14:35.68:0,36,314	0/1:17,0:16:69.24:204,0,69	0/1:13,0:13:2.73:45,0,3	0/1:22,0:22:8.36:226,0,8	0/1:18,0:17:17.37:17,0,60	0/1:19,0:19:85.01:130,0,85	0/1:10,0:9:33.04:51,0,33	0/1:12,0:12:56.42:56,0,116	1/1:27,0:26:35.55:520,36,0	1/1:5,1:6:5.70:52,6,0	0/1:26,0:26:56.29:187,0,56	0/0:23,0:23:69.03:0,69,1228	0/0:20,0:18:26.86:0,27,368	1/1:15,0:13:6.95:140,7,0	0/1:15,1:16:78.93:205,0,79	0/1:17,1:18:20.91:294,0,21	0/1:9,0:6:40.32:40,0,72
chr10	41248882	.	CA	C	4720.33	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-1.731;DP=598;FS=3.458;HRun=9;HaplotypeScore=79.8581;InbreedingCoeff=0.9640;MQ=72.61;MQ0=5;MQRankSum=-0.281;QD=22.48;ReadPosRankSum=1.771;VQSLOD=5.7631;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:26:75.20:0,75,850	0/0:11,0:11:33.10:0,33,379	0/0:22,0:21:1.27:0,1,169	0/0:16,0:15:15.75:0,16,219	0/0:19,0:19:48.13:0,48,544	1/1:3,20:23:41.74:528,42,0	1/1:1,13:14:29.97:274,30,0	0/0:4,0:24:39.01:0,39,273	1/1:0,16:16:45.02:412,45,0	1/1:4,22:25:34.05:569,34,0	1/1:0,28:27:81.04:741,81,0	0/0:22,0:22:54.15:0,54,616	1/1:3,15:18:45.02:412,45,0	0/0:24,0:24:63.19:0,63,726	1/1:4,29:31:69.03:631,69,0	0/0:21,0:21:57.17:0,57,657	0/0:23,0:23:69.16:0,69,781	1/1:2,10:11:27.01:247,27,0	0/0:12,0:19:31.60:0,32,209	0/0:1,0:22:53.44:0,53,298	0/0:7,0:18:22.13:0,22,149	1/1:2,18:19:54.03:494,54,0	0/0:29,0:29:75.22:0,75,863	0/0:19,0:19:51.15:0,51,589	1/1:1,19:19:45.02:412,45,0	0/0:4,1:29:34.26:0,34,326	0/0:5,0:27:52.33:0,52,283	0/0:4,0:13:25.57:0,26,130
chr10	41254629	.	AT	A	7108.08	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=11.534;DP=529;FS=3.381;HRun=5;HaplotypeScore=53.1416;InbreedingCoeff=0.9994;MQ=88.47;MQ0=0;MQRankSum=-0.722;QD=30.25;ReadPosRankSum=0.573;VQSLOD=5.2959;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:57.19:0,57,772	0/0:13,0:13:39.12:0,39,516	0/0:25,0:25:56.20:0,56,772	0/0:13,0:13:30.05:0,30,383	1/1:4,26:30:75.21:851,75,0	0/0:26,0:26:75.21:0,75,1004	0/0:12,0:12:33.10:0,33,437	1/1:0,19:19:57.16:646,57,0	0/0:12,0:12:33.11:0,33,451	0/0:20,0:20:57.18:0,57,757	0/0:21,0:21:63.21:0,63,861	0/0:15,0:15:42.13:0,42,561	0/0:13,0:13:36.12:0,36,492	1/1:2,21:23:60.17:681,60,0	0/0:23,0:23:63.21:0,63,862	1/1:0,10:10:27.08:306,27,0	1/1:1,20:21:51.14:578,51,0	0/0:14,0:14:36.10:0,36,474	1/1:2,30:32:90.23:1006,90,0	1/1:2,20:22:54.12:598,54,0	1/1:0,16:16:42.12:476,42,0	0/0:23,0:23:66.22:0,66,903	0/0:10,0:10:27.08:0,27,353	0/0:15,0:15:42.12:0,42,557	0/0:18,0:18:54.18:0,54,738	1/1:1,22:23:28.16:708,28,0	1/1:0,23:23:66.19:748,66,0	1/1:0,16:16:45.13:510,45,0
chr10	41258037	.	A	AGCTGGTGTTTTTA	16977.53	PASS	AB=0.972;AC=50;AF=0.893;AN=56;BaseQRankSum=-7.001;DP=251;FS=0.000;HRun=0;HaplotypeScore=312.8563;InbreedingCoeff=-0.1291;MQ=76.33;MQ0=0;MQRankSum=0.587;QD=67.64;ReadPosRankSum=-3.060;VQSLOD=3.0074;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,0:10:19.23:902,19,0	1/1:9,0:9:13.64:344,14,0	1/1:8,1:9:24.01:845,24,0	0/1:8,0:6:20.89:965,0,21	1/1:8,0:8:16.93:445,17,0	1/1:13,0:13:29.06:1227,29,0	1/1:14,0:14:16.12:966,16,0	1/1:12,0:12:32.92:1195,33,0	1/1:12,0:12:18.85:1320,19,0	1/1:10,0:10:12.43:780,12,0	1/1:7,0:7:17.56:539,18,0	1/1:6,0:6:17.99:665,18,0	1/1:5,0:5:12.04:512,12,0	0/1:9,0:9:36.41:133,0,36	0/1:9,0:9:16.04:223,0,16	1/1:10,0:10:3.88:856,4,0	0/1:3,0:3:7.74:236,0,8	1/1:7,0:7:7.70:487,8,0	1/1:15,0:15:25.93:1105,26,0	1/1:8,0:8:14.64:455,15,0	1/1:7,0:6:13.86:399,14,0	1/1:8,0:8:17.76:379,18,0	1/1:10,0:10:21.72:382,22,0	1/1:12,0:9:11.95:230,12,0	0/1:9,0:9:1.69:344,0,2	1/1:7,0:7:10:393,10,0	1/1:7,0:7:4.36:404,4,0	0/1:4,0:4:5.23:244,0,5
chr10	41258332	.	A	AT	22487.83	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=-8.592;DP=713;FS=1.433;HRun=1;HaplotypeScore=70.1985;InbreedingCoeff=1.0000;MQ=86.33;MQ0=0;MQRankSum=-5.904;QD=41.88;ReadPosRankSum=2.711;VQSLOD=5.3605;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,108,1389	0/0:17,0:17:45.15:0,45,583	0/0:28,0:28:81.25:0,81,1034	0/0:28,0:28:78.22:0,78,985	1/1:0,31:31:93.27:1367,93,0	1/1:0,24:24:69.23:1034,69,0	1/1:0,24:24:72.24:1078,72,0	1/1:1,35:36:99:1547,105,0	1/1:0,25:25:69.23:1034,69,0	1/1:1,22:23:63.14:861,63,0	1/1:0,28:28:75.25:1123,75,0	0/0:17,0:17:48.16:0,48,623	1/1:0,21:21:63.21:944,63,0	1/1:0,21:21:57.19:854,57,0	1/1:2,23:25:69.23:1034,69,0	1/1:1,24:25:69.23:1034,69,0	1/1:1,23:24:60.20:899,60,0	1/1:0,19:19:54.14:784,54,0	1/1:2,28:30:87.28:1284,87,0	1/1:0,29:29:87.29:1303,87,0	1/1:0,33:33:81.27:1214,81,0	1/1:0,21:21:57.19:853,57,0	0/0:25,0:25:69.22:0,69,894	0/0:24,0:24:72.23:0,72,935	1/1:0,23:23:69.23:1033,69,0	1/1:0,30:30:90.28:1325,90,0	1/1:1,28:29:84.28:1255,84,0	1/1:2,14:16:42.14:629,42,0
chr10	41259600	.	C	CT	15574.71	PASS	AB=0.827;AC=54;AF=0.964;AN=56;BaseQRankSum=2.666;DP=486;FS=9.029;HRun=2;HaplotypeScore=242.5121;InbreedingCoeff=-0.0394;MQ=61.33;MQ0=0;MQRankSum=-4.393;QD=32.05;ReadPosRankSum=2.619;VQSLOD=3.0704;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,25:30:63.16:877,63,0	1/1:1,6:7:21.04:279,21,0	0/1:9,4:13:13.32:194,0,13	0/1:7,1:8:38.08:38,0,110	1/1:4,22:26:38.99:472,39,0	1/1:3,18:21:60.09:789,60,0	1/1:1,17:18:51.09:686,51,0	1/1:5,24:29:75.25:1080,75,0	1/1:1,17:18:51.17:732,51,0	1/1:3,14:17:45.15:644,45,0	1/1:3,17:20:39.05:514,39,0	1/1:2,16:18:51.16:711,51,0	1/1:2,10:12:33.07:451,33,0	1/1:4,23:26:60.16:839,60,0	1/1:2,16:18:51.09:683,51,0	1/1:3,18:21:57.16:792,57,0	1/1:3,14:17:35.99:475,36,0	1/1:0,7:7:18.06:259,18,0	1/1:2,12:14:39.11:541,39,0	1/1:4,27:31:68.94:830,69,0	1/1:5,13:18:33.04:414,33,0	1/1:2,14:16:38.97:469,39,0	1/1:1,8:9:12:149,12,0	1/1:0,5:5:12.04:172,12,0	1/1:1,7:8:18.05:242,18,0	1/1:2,24:26:69.23:992,69,0	1/1:1,24:25:69.23:991,69,0	1/1:0,6:6:18.06:259,18,0
chr10	41260133	.	A	AG	8368.07	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-12.862;DP=526;FS=5.834;HRun=0;HaplotypeScore=47.5740;InbreedingCoeff=0.9986;MQ=66.65;MQ0=5;MQRankSum=-0.622;QD=40.23;ReadPosRankSum=-2.727;VQSLOD=3.8076;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,105,1428	0/0:8,0:8:24.08:0,24,334	0/0:13,0:13:39.13:0,39,543	0/0:15,0:13:35.76:0,36,426	1/1:0,26:26:66.12:1018,66,0	0/0:26,0:26:78.14:0,78,1025	0/0:12,0:12:36.12:0,36,502	1/1:0,29:26:75.20:1097,75,0	0/0:17,0:17:51.17:0,51,710	0/0:23,0:23:69.21:0,69,921	0/0:20,0:20:57.18:0,57,777	0/0:14,0:14:39.06:0,39,507	0/0:15,0:15:45.14:0,45,612	1/1:0,10:10:21.07:334,21,0	0/0:17,0:17:51.17:0,51,709	1/1:0,10:10:27.09:430,27,0	1/1:1,21:22:54.18:858,54,0	0/0:13,0:13:35.85:0,36,471	1/1:0,16:15:45.11:646,45,0	1/1:0,28:28:71.96:1114,72,0	1/1:0,18:18:45.15:718,45,0	0/0:17,0:17:51.17:0,51,710	0/0:24,0:24:69.18:0,69,921	0/0:26,0:26:78.26:0,78,1085	0/0:20,0:20:60.16:0,60,813	1/1:0,24:24:72.13:1062,72,0	1/1:0,17:17:45.15:717,45,0	1/1:0,8:8:24.08:375,24,0
chr10	41260582	.	ATGT	A	984.02	PASS	AC=12;AF=0.333;AN=36;BaseQRankSum=3.730;DP=330;FS=0.000;HRun=0;HaplotypeScore=27.7640;InbreedingCoeff=0.6896;MQ=18.50;MQ0=210;MQRankSum=-1.137;QD=12.00;ReadPosRankSum=-0.379;VQSLOD=2.8001;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:1:3.01:0,3,67	0/0:6,0:4:12.04:0,12,237	./.	./.	./.	0/0:18,0:10:15.05:0,15,304	./.	./.	0/0:19,0:5:9.03:0,9,170	0/0:22,0:12:30.10:0,30,670	0/0:8,0:4:8.99:0,9,154	./.	0/0:17,0:8:9.03:0,9,200	1/1:1,13:7:18.06:293,18,0	0/0:14,0:4:6.02:0,6,134	1/1:1,13:6:11.81:196,12,0	./.	./.	./.	1/1:0,11:9:18.06:294,18,0	./.	0/0:12,0:7:3.01:0,3,67	0/0:9,0:7:2.55:0,3,20	0/0:8,0:1:2.98:0,3,21	0/0:6,0:5:15.01:0,15,287	1/1:9,17:7:6.02:98,6,0	1/1:0,13:5:9.03:147,9,0	1/1:0,4:3:6.02:98,6,0
chr10	41261484	.	ATGT	A	382.98	PASS	AC=8;AF=0.400;AN=20;BaseQRankSum=2.622;DP=249;FS=0.000;HRun=0;HaplotypeScore=33.6329;InbreedingCoeff=0.7143;MQ=14.88;MQ0=193;MQRankSum=-2.419;QD=16.65;ReadPosRankSum=-0.752;VQSLOD=2.6665;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	0/0:6,0:5:12.04:0,12,267	./.	./.	1/1:1,6:5:12.04:195,12,0	./.	./.	./.	./.	0/0:11,0:5:15.05:0,15,335	0/0:11,0:10:9.50:0,10,197	./.	./.	./.	./.	./.	./.	./.	./.	1/1:2,3:5:9.03:147,9,0	./.	0/0:13,0:11:15.05:0,15,334	0/0:10,0:4:3.01:0,3,67	./.	0/0:8,0:7:8.99:0,9,187	./.	1/1:0,8:1:3.01:49,3,0	1/1:0,3:2:6.02:98,6,0
chr10	41263291	.	G	GACAA	23379.77	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=-12.800;DP=648;FS=7.159;HRun=0;HaplotypeScore=81.3063;InbreedingCoeff=0.9820;MQ=54.58;MQ0=24;MQRankSum=-3.503;QD=47.81;ReadPosRankSum=3.619;VQSLOD=5.0838;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:33:75.19:0,75,1267	0/0:12,0:12:36.12:0,36,647	0/0:21,0:12:36.05:0,36,568	0/0:30,0:12:32.58:0,33,503	1/1:5,19:23:42.06:975,42,0	1/1:2,19:20:45.15:1167,45,0	1/1:0,5:5:12.04:312,12,0	1/1:9,3:6:15.01:161,15,0	1/1:1,16:16:33.11:856,33,0	1/1:4,32:36:96.20:2292,96,0	1/1:1,31:31:62.61:1449,63,0	0/0:18,0:18:54.15:0,54,911	1/1:3,18:21:42.14:1091,42,0	1/1:4,16:19:45.15:1168,45,0	1/1:4,25:30:48.16:1246,48,0	1/1:3,12:15:24.08:623,24,0	1/1:4,26:30:60.21:1557,60,0	1/1:5,6:8:14.89:269,15,0	1/1:3,5:7:15.04:309,15,0	1/1:6,34:39:87.23:2145,87,0	1/1:3,5:11:15.05:389,15,0	1/1:3,34:37:75.21:1888,75,0	0/0:27,0:27:72.25:0,72,1293	0/0:17,0:17:42.14:0,42,748	1/1:4,10:14:24.08:624,24,0	1/1:6,23:29:69.22:1654,69,0	1/1:6,31:39:75.10:1882,75,0	1/1:1,20:21:51.18:1324,51,0
chr10	41263786	.	A	AGG	12091.56	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=-7.796;DP=568;FS=16.926;HRun=1;HaplotypeScore=55.2871;InbreedingCoeff=0.9705;MQ=51.11;MQ0=13;MQRankSum=-10.435;QD=29.21;ReadPosRankSum=0.584;VQSLOD=2.8491;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:60.20:0,60,915	0/0:10,0:10:30.10:0,30,458	0/0:32,0:29:81.19:0,81,1174	0/0:26,0:24:66.15:0,66,934	1/1:0,26:24:42.14:795,42,0	1/1:0,23:18:36.08:656,36,0	1/1:1,11:9:15.05:289,15,0	1/1:3,13:9:27.06:455,27,0	1/1:0,17:13:27.09:503,27,0	1/1:1,29:25:74.91:1352,75,0	1/1:1,24:19:27.05:482,27,0	0/0:17,0:17:51.16:0,51,758	1/1:0,12:9:18.06:347,18,0	1/1:1,20:17:27.09:503,27,0	1/1:0,21:16:33.07:599,33,0	1/1:2,19:19:27.02:446,27,0	1/1:1,14:17:36.12:680,36,0	1/1:0,9:7:15.05:270,15,0	1/1:1,13:13:27.09:504,27,0	1/1:0,28:23:42.10:753,42,0	1/1:1,9:6:6.02:116,6,0	1/1:0,17:18:30.06:541,30,0	0/0:23,0:24:63.20:0,63,933	0/0:21,0:21:60.20:0,60,914	1/1:1,12:11:21.07:404,21,0	1/1:2,24:22:63.20:1182,63,0	1/1:0,35:23:45.15:868,45,0	1/1:0,8:8:18.06:347,18,0
chr10	41264403	.	GT	G	6777.58	PASS	AC=40;AF=0.741;AN=54;BaseQRankSum=6.914;DP=487;FS=5.848;HRun=8;HaplotypeScore=65.2958;InbreedingCoeff=0.9637;MQ=49.44;MQ0=10;MQRankSum=0.648;QD=19.42;ReadPosRankSum=2.553;VQSLOD=4.8777;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:72.21:0,72,857	0/0:7,0:7:21.06:0,21,254	0/0:26,0:11:21.05:0,21,238	0/0:18,0:9:12.01:0,12,127	1/1:1,14:14:24.03:232,24,0	1/1:1,22:21:45.07:434,45,0	1/1:3,12:11:18.03:174,18,0	./.	1/1:0,18:17:41.86:405,42,0	1/1:1,20:21:60.06:566,60,0	1/1:2,20:22:54.08:521,54,0	0/0:14,0:14:36.10:0,36,424	1/1:0,10:10:18.03:174,18,0	1/1:2,9:11:12.01:116,12,0	1/1:2,19:21:33.05:319,33,0	1/1:2,5:6:9.01:87,9,0	1/1:0,16:15:33.05:319,33,0	1/1:1,29:29:72.06:686,72,0	1/1:2,8:8:21.02:197,21,0	1/1:4,32:35:78.10:753,78,0	1/1:0,6:4:12.02:116,12,0	1/1:2,14:16:30.04:290,30,0	0/0:23,0:23:60.18:0,60,719	0/0:17,0:17:48.11:0,48,563	1/1:2,20:22:48.07:463,48,0	1/1:4,17:18:39.06:377,39,0	1/1:2,17:18:42.07:405,42,0	1/1:2,8:10:15.02:145,15,0
chr10	41264539	.	AT	A	2239.60	PASS	AB=0.742;AC=18;AF=0.360;AN=50;BaseQRankSum=6.538;DP=669;FS=4.746;HRun=1;HaplotypeScore=29.8506;InbreedingCoeff=0.7889;MQ=32.34;MQ0=102;MQRankSum=-8.193;QD=8.48;ReadPosRankSum=3.148;VQSLOD=1.2497;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:21:24.05:0,24,311	0/0:17,0:11:18:0,18,227	./.	./.	0/1:13,16:15:27.66:132,0,28	0/0:22,0:15:21.07:0,21,306	0/0:17,0:9:17.89:0,18,207	1/1:8,11:7:18.01:195,18,0	0/0:27,0:22:48.13:0,48,664	0/0:29,0:17:48.13:0,48,680	0/0:29,0:22:24.08:0,24,350	0/0:16,0:13:33.10:0,33,459	0/0:15,0:13:30.09:0,30,419	1/1:3,14:13:18.06:238,18,0	0/0:28,0:17:24.06:0,24,313	1/1:5,6:6:15.05:205,15,0	0/1:38,9:22:66.54:67,0,116	0/0:32,0:15:14.89:0,15,190	1/1:13,6:5:15.05:203,15,0	1/1:10,25:18:9.03:123,9,0	./.	0/0:13,0:11:23.95:0,24,320	0/0:37,0:22:27.05:0,27,369	0/0:41,0:18:18.06:0,18,263	0/0:28,0:22:26.96:0,27,303	1/1:13,20:20:51.14:654,51,0	1/1:9,24:22:36.12:492,36,0	1/1:15,6:9:9.03:124,9,0
chr10	41266979	.	TC	T	4487.20	PASS	AB=0.684;AC=20;AF=0.370;AN=54;BaseQRankSum=2.699;DP=528;FS=5.999;HRun=1;HaplotypeScore=81.7464;InbreedingCoeff=0.6296;MQ=43.88;MQ0=33;MQRankSum=0.020;QD=21.47;ReadPosRankSum=-1.648;VQSLOD=4.2837;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:81.26:0,81,1271	0/0:12,0:12:30.10:0,30,479	0/0:14,0:1:3.01:0,3,48	./.	1/1:2,20:20:36.12:503,36,0	0/0:19,0:15:33.11:0,33,527	0/0:13,0:11:21.07:0,21,335	1/1:1,8:7:21.01:238,21,0	0/0:23,0:22:45.15:0,45,718	0/0:36,0:25:75.25:0,75,1176	0/0:31,0:28:63.21:0,63,989	0/0:25,0:23:66.23:0,66,1054	0/1:21,1:18:2.72:3,0,535	1/1:2,8:8:12.04:168,12,0	0/0:15,0:14:33.11:0,33,527	0/1:8,5:11:99:143,0,167	0/1:3,25:28:80.32:691,0,80	0/0:14,0:11:24.08:0,24,383	1/1:1,8:8:21.07:293,21,0	1/1:2,31:31:33.47:1042,33,0	1/1:1,10:9:12.04:168,12,0	0/0:22,0:20:39.13:0,39,612	0/0:22,0:21:45.15:0,45,719	0/0:7,0:7:21.07:0,21,333	0/0:26,0:25:51.17:0,51,801	1/1:2,18:17:0.17:558,0,0	0/1:2,17:14:14.69:386,0,15	1/1:0,13:10:21.07:294,21,0
chr10	41269488	.	T	TC	875.84	PASS	AB=0.982;AC=14;AF=0.250;AN=56;BaseQRankSum=1.343;DP=533;FS=4.887;HRun=0;HaplotypeScore=169.3722;InbreedingCoeff=0.1994;MQ=43.37;MQ0=37;MQRankSum=-2.163;QD=3.50;ReadPosRankSum=-0.902;VQSLOD=3.2093;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:24:44.98:0,45,510	0/0:6,0:6:15.05:0,15,209	0/0:14,0:9:18.98:0,19,226	0/0:14,0:6:18.06:0,18,247	1/1:6,9:22:20.80:304,21,0	0/1:25,1:23:7.44:7,0,263	0/1:34,1:32:15.85:16,0,419	0/1:41,2:41:62.66:63,0,1074	0/0:19,0:15:10.58:0,11,156	0/0:26,0:24:25.04:0,25,673	0/0:16,0:16:8.88:0,9,104	0/0:4,0:4:9.01:0,9,107	0/1:11,0:9:26.84:27,0,190	1/1:7,6:15:27.06:361,27,0	0/0:21,0:21:15.05:0,15,207	1/1:4,2:13:9.02:121,9,0	0/1:23,0:15:37.25:37,0,53	0/1:9,0:8:5.83:6,0,208	0/1:17,0:16:3.59:4,0,340	0/0:21,0:19:21.51:0,22,270	0/0:23,0:18:17.35:0,17,225	0/0:29,0:28:21.04:0,21,262	0/0:11,0:9:12.04:0,12,165	0/0:8,0:3:5.98:0,6,61	0/0:19,0:17:2.21:0,2,77	0/1:29,1:26:93.87:94,0,437	0/0:17,0:16:27.48:0,27,346	0/0:9,0:9:18.04:0,18,231
chr10	41269490	.	TG	T	414.09	PASS	AB=1.000;AC=14;AF=0.250;AN=56;BaseQRankSum=5.088;DP=527;FS=6.384;HRun=1;HaplotypeScore=168.9762;InbreedingCoeff=0.3990;MQ=41.24;MQ0=38;MQRankSum=-0.010;QD=2.00;ReadPosRankSum=2.506;VQSLOD=-0.5974;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:25:29.07:0,29,330	0/0:6,0:6:15.05:0,15,220	0/0:12,0:8:15.82:0,16,168	0/0:14,0:6:18.06:0,18,224	1/1:21,0:21:14.74:63,15,0	0/1:28,0:25:0.32:0,0,268	0/1:31,0:30:9.34:9,0,347	0/0:41,0:41:81.59:0,82,1228	0/1:18,0:14:3.18:3,0,103	0/0:24,0:22:42.34:0,42,649	0/0:16,0:16:8.77:0,9,102	0/0:3,0:3:6.02:0,6,86	0/1:12,0:9:3.39:3,0,175	1/1:18,0:14:18.34:97,18,0	0/0:20,0:21:15.05:0,15,200	1/1:13,0:12:2.44:6,2,0	1/1:6,12:15:35.84:347,36,0	0/1:9,0:8:6.43:6,0,216	0/0:18,0:17:42:0,42,470	0/0:20,0:20:21.40:0,21,245	0/0:23,0:18:14.72:0,15,179	0/0:26,0:26:14.92:0,15,177	0/0:11,0:9:12.02:0,12,138	0/0:7,0:2:2.97:0,3,20	0/0:20,0:18:7.84:0,8,82	0/1:31,0:27:32.30:32,0,417	0/0:18,0:17:27.51:0,28,360	0/0:8,0:8:15.01:0,15,190
chr10	41269492	.	T	TC	357.11	PASS	AB=0.955;AC=11;AF=0.204;AN=54;BaseQRankSum=4.699;DP=524;FS=10.581;HRun=0;HaplotypeScore=173.5350;InbreedingCoeff=0.1015;MQ=40.82;MQ0=38;MQRankSum=-1.429;QD=1.53;ReadPosRankSum=2.946;VQSLOD=1.8571;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:25:38.96:0,39,429	0/0:6,0:6:15.05:0,15,209	0/0:9,0:6:12.91:0,13,145	0/0:11,0:5:12.04:0,12,166	1/1:18,3:20:11.54:55,12,0	0/1:27,2:26:11.22:11,0,258	0/1:33,1:31:19.18:19,0,362	0/1:39,1:39:40.87:41,0,877	0/0:18,0:14:10.26:0,10,127	0/0:24,0:22:32.76:0,33,641	0/0:16,1:17:6.37:0,6,83	0/0:3,0:3:6.02:0,6,83	0/1:12,1:10:13.19:13,0,192	0/1:17,2:15:32.09:32,0,38	0/0:23,0:23:14.96:0,15,175	0/0:11,2:12:5.68:0,6,28	1/1:22,3:16:32.33:207,32,0	0/0:9,0:8:5.95:0,6,218	0/0:17,0:16:37.69:0,38,341	0/1:22,0:20:10.15:10,0,125	0/0:22,0:18:11.33:0,11,140	0/0:26,0:25:12.04:0,12,166	0/0:11,0:9:9.03:0,9,124	./.	0/0:20,0:18:2.21:0,2,70	0/1:29,0:26:99:118,0,374	0/0:19,0:18:11.54:0,12,223	0/0:7,0:7:13.15:0,13,138
chr10	41269498	.	T	TC	1228.54	PASS	AB=0.911;AC=18;AF=0.346;AN=52;BaseQRankSum=0.313;DP=493;FS=10.407;HRun=0;HaplotypeScore=168.2863;InbreedingCoeff=-0.2237;MQ=36.27;MQ0=37;MQRankSum=-0.007;QD=3.71;ReadPosRankSum=1.524;VQSLOD=2.7973;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:23:32.94:0,33,346	0/0:6,0:6:15.05:0,15,209	0/0:6,0:4:9.50:0,10,125	0/0:10,0:5:12.04:0,12,166	0/0:24,0:23:11.97:0,12,128	0/0:28,1:26:0.37:0,0,224	0/1:31,0:28:18.60:19,0,243	0/1:29,5:35:99:368,0,596	0/1:16,0:13:5.86:6,0,14	0/1:22,0:20:93.57:94,0,209	1/1:15,1:16:8.69:71,9,0	0/0:3,0:3:6.02:0,6,83	0/1:13,0:10:40.30:40,0,55	0/0:19,0:15:21.06:0,21,261	1/1:19,1:21:11.74:119,12,0	./.	0/1:24,0:15:16.07:16,0,315	0/0:8,0:7:7.11:0,7,141	0/1:16,1:16:72.18:72,0,325	0/1:17,4:19:8.78:69,0,9	0/1:15,5:16:34.77:42,0,35	0/1:26,1:26:13.97:18,0,14	0/0:12,0:10:12.04:0,12,166	./.	0/1:17,0:16:22.43:42,0,22	0/1:22,3:22:99:205,0,213	0/1:11,4:15:12.26:164,0,12	0/1:2,3:5:11.10:41,0,11
chr10	41269500	.	T	TC	847.76	PASS	AB=0.900;AC=18;AF=0.346;AN=52;BaseQRankSum=-0.531;DP=474;FS=0.609;HRun=0;HaplotypeScore=167.7198;InbreedingCoeff=-0.1950;MQ=35.75;MQ0=36;MQRankSum=-0.107;QD=2.55;ReadPosRankSum=-1.379;VQSLOD=3.1248;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:22:32.94:0,33,346	0/0:6,0:6:15.05:0,15,207	0/0:4,0:3:9.03:0,9,120	0/0:9,0:4:12.04:0,12,162	0/0:24,0:23:11.92:0,12,98	0/1:25,1:23:12.37:12,0,110	0/1:30,0:27:18.29:18,0,131	0/1:37,0:35:54.41:54,0,617	0/1:11,6:13:8.11:52,0,8	0/1:12,3:15:99:200,0,124	1/1:11,5:16:9.02:124,9,0	0/0:3,0:3:6.02:0,6,83	0/1:7,3:8:11.12:154,0,11	0/0:19,0:15:21.01:0,21,204	0/1:11,6:19:4.59:97,0,5	./.	0/1:25,0:16:7.22:7,0,318	0/1:6,2:7:64.09:64,0,81	0/1:17,0:16:26.41:26,0,279	0/1:21,0:19:22.89:23,0,52	0/1:20,0:16:7.50:7,0,35	1/1:16,9:25:9.03:141,9,0	0/0:11,0:9:12.04:0,12,166	./.	0/1:10,7:16:7.46:7,0,27	0/1:26,0:22:14.11:14,0,270	0/0:16,0:15:0.16:0,0,61	0/0:5,0:5:7.24:0,7,55
chr10	41269504	.	T	TC	191.25	PASS	AB=0.967;AC=8;AF=0.154;AN=52;BaseQRankSum=1.348;DP=447;FS=9.706;HRun=0;HaplotypeScore=169.0236;InbreedingCoeff=0.0434;MQ=35.35;MQ0=35;MQRankSum=-1.219;QD=1.63;ReadPosRankSum=-0.108;VQSLOD=1.5560;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:21:35.95:0,36,387	0/0:5,0:5:12.04:0,12,167	0/0:3,0:2:2.98:0,3,39	0/0:6,0:1:3.01:0,3,39	0/0:23,0:22:5.99:0,6,50	0/1:22,4:23:8.52:80,0,9	1/1:23,0:25:19.58:172,20,0	0/0:32,0:30:41.46:0,41,816	0/1:16,0:12:5.15:5,0,32	0/0:15,0:14:26.62:0,27,242	0/1:16,0:16:16.42:27,0,16	0/0:3,0:3:6.02:0,6,83	0/1:11,0:8:18.23:18,0,60	0/0:20,0:16:21.04:0,21,211	0/0:19,0:19:1.59:0,2,39	./.	0/0:25,0:16:10.81:0,11,241	0/1:6,0:5:11.25:11,0,84	0/1:13,1:13:4.25:4,0,336	0/0:20,0:18:15:0,15,179	0/0:19,0:15:6.48:0,6,78	0/0:26,0:25:1.45:0,1,10	0/0:11,0:9:12.04:0,12,166	./.	0/0:16,0:15:6.01:0,6,66	0/0:26,0:22:31.20:0,31,545	0/0:16,0:15:18.98:0,19,219	0/0:3,0:3:9.03:0,9,116
chr10	41269506	.	T	TC	250.18	PASS	AB=0.956;AC=5;AF=0.100;AN=50;BaseQRankSum=0.042;DP=422;FS=3.637;HRun=0;HaplotypeScore=168.9446;InbreedingCoeff=0.2538;MQ=35.21;MQ0=33;MQRankSum=-0.732;QD=3.13;ReadPosRankSum=-0.268;VQSLOD=2.7963;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:21:38.94:0,39,410	0/0:5,0:5:12.04:0,12,167	0/1:1,0:1:0:0,0,0	./.	0/0:23,0:22:5.64:0,6,31	0/1:21,4:23:12.85:149,0,13	1/1:24,2:25:19.47:194,19,0	0/0:27,0:25:69.12:0,69,850	0/0:14,0:11:6.02:0,6,71	0/0:13,0:12:32.08:0,32,368	0/0:16,0:16:7.45:0,7,76	0/0:4,0:4:6.02:0,6,81	0/0:11,0:8:17.20:0,17,161	0/0:20,0:16:20.83:0,21,171	0/0:17,0:17:5.98:0,6,61	./.	0/1:25,0:16:16.12:16,0,225	0/0:5,0:4:1.72:0,2,97	0/0:12,0:11:11.47:0,11,339	0/0:17,0:15:12.01:0,12,139	0/0:18,0:15:6.48:0,6,83	0/0:25,0:24:2.89:0,3,26	0/0:11,0:9:12.03:0,12,149	./.	0/0:16,0:15:6.02:0,6,82	0/0:24,0:20:53.97:0,54,591	0/0:16,0:15:18.05:0,18,237	0/0:3,0:3:9.03:0,9,121
chr10	41269515	.	GTGTGCGCGCGCGCA	G	2113.79	PASS	AB=1.000;AC=19;AF=0.396;AN=48;BaseQRankSum=7.592;DP=380;FS=35.989;HRun=0;HaplotypeScore=194.3516;InbreedingCoeff=-0.2659;MQ=39.02;MQ0=31;MQRankSum=-4.482;QD=8.81;ReadPosRankSum=5.356;VQSLOD=0.8191;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:21:8.98:9,0,1225	0/0:5,0:5:12.04:0,12,451	1/1:3,0:3:0.20:0,0,0	./.	1/1:17,5:21:7.05:112,7,0	0/1:25,0:22:70.84:174,0,71	0/1:25,0:22:31.76:61,0,32	0/0:21,0:18:42.57:0,43,330	0/1:9,0:7:13.47:65,0,13	0/1:12,0:11:48.30:265,0,48	0/1:15,0:15:12.85:27,0,13	0/0:3,0:3:6.02:0,6,224	0/1:10,0:7:8.25:207,0,8	1/1:15,2:13:9.02:220,9,0	0/0:17,0:17:3.01:0,3,45	./.	0/1:23,0:14:8.10:257,0,8	0/1:4,0:4:33.75:52,0,34	0/1:13,0:11:56.37:56,0,209	0/0:13,0:11:3.01:0,3,46	0/0:14,0:12:5.07:0,5,114	./.	0/0:11,0:9:11.85:0,12,537	./.	0/0:15,0:14:2.60:0,3,10	0/1:21,0:18:85.39:634,0,85	0/1:15,0:14:55.11:55,0,146	0/1:3,0:3:60.87:61,0,63
chr10	41269518	.	TGCGCGCGCGCACGCGCGCGC	T	4706.72	PASS	AB=1.000;AC=29;AF=0.690;AN=42;BaseQRankSum=5.878;DP=414;FS=19.748;HRun=0;HaplotypeScore=215.5267;InbreedingCoeff=0.3746;MQ=39.45;MQ0=30;MQRankSum=-6.039;QD=18.31;ReadPosRankSum=2.744;VQSLOD=2.2124;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:22:36.12:0,36,2827	0/0:6,0:6:15.05:0,15,986	0/1:4,0:3:1.37:1,0,48	./.	1/1:22,0:21:4.84:116,5,0	1/1:24,1:24:9.50:372,10,0	1/1:22,1:20:3.01:155,3,0	./.	1/1:6,1:6:3.01:152,3,0	1/1:15,0:15:13.86:603,14,0	1/1:19,0:19:3.01:93,3,0	0/0:3,0:3:6.02:0,6,375	1/1:10,0:8:9.03:465,9,0	1/1:17,0:13:6.02:232,6,0	./.	./.	0/1:22,0:13:38.66:313,0,39	1/1:3,0:3:3.01:158,3,0	0/1:17,0:15:99:141,0,234	./.	0/0:12,1:12:2.10:0,2,179	./.	0/0:11,0:9:11.61:0,12,992	./.	1/1:16,0:15:3.01:56,3,0	1/1:24,0:24:35.41:1494,35,0	1/1:21,0:20:6.49:204,6,0	1/1:4,0:4:3.01:149,3,0
chr10	41269519	.	GCGCGCGCGCA	G	2328.75	PASS	AB=1.000;AC=29;AF=0.690;AN=42;BaseQRankSum=6.706;DP=328;FS=36.636;HRun=0;HaplotypeScore=149.3184;InbreedingCoeff=0.4760;MQ=44.58;MQ0=29;MQRankSum=-5.758;QD=11.42;ReadPosRankSum=4.189;VQSLOD=1.2652;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:22:39.11:0,39,1519	0/0:6,0:6:15.02:0,15,380	0/0:4,0:4:3.12:0,3,12	./.	1/1:22,0:21:4.31:69,4,0	1/1:19,2:18:9.03:236,9,0	1/1:16,0:13:3.01:72,3,0	./.	1/1:6,0:4:3.01:72,3,0	1/1:14,0:13:12.04:286,12,0	1/1:12,0:12:3.01:64,3,0	0/0:3,0:3:6.02:0,6,172	1/1:8,0:5:9.03:220,9,0	1/1:17,0:13:6.02:153,6,0	./.	./.	1/1:22,0:13:14.62:286,15,0	1/1:3,0:3:3.01:71,3,0	0/1:15,0:13:63.86:64,0,125	./.	0/0:7,0:6:2.70:0,3,75	./.	0/0:10,0:8:11.72:0,12,523	./.	1/1:8,1:9:2.74:12,3,0	1/1:21,1:20:30.10:729,30,0	1/1:15,0:15:3.01:70,3,0	1/1:2,0:2:3.01:70,3,0
chr10	41269521	.	GCGCGCGCACGCGCGCGCGCGCGCGTGCA	G	6441.84	PASS	AB=0.847;AC=29;AF=0.604;AN=48;BaseQRankSum=5.652;DP=297;FS=10.694;HRun=0;HaplotypeScore=189.3877;InbreedingCoeff=0.3704;MQ=48.75;MQ0=24;MQRankSum=-5.819;QD=32.87;ReadPosRankSum=1.776;VQSLOD=2.8853;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:20:39.13:0,39,4288	0/0:5,0:5:15.05:0,15,1419	0/0:5,0:4:7.68:0,8,113	0/0:4,0:1:2.99:0,3,24	0/1:22,0:21:7.56:31,0,8	1/1:8,9:15:9.03:525,9,0	1/1:6,3:7:3.01:221,3,0	./.	1/1:2,0:3:3.01:224,3,0	1/1:3,11:13:29.84:1059,30,0	1/1:1,10:11:3.01:81,3,0	0/0:3,0:3:6.02:0,6,532	1/1:3,4:5:9.03:613,9,0	1/1:17,0:13:1.49:76,1,0	./.	./.	0/1:20,0:13:99:152,0,203	1/1:1,0:1:3.01:226,3,0	0/1:2,11:12:99:336,0,286	1/1:2,11:13:2.90:16,3,0	0/0:5,1:5:2:0,2,232	./.	0/0:11,0:9:14.73:0,15,1715	0/0:7,0:2:3.01:0,3,342	1/1:2,9:11:3.01:114,3,0	1/1:6,16:20:39.27:2179,39,0	1/1:1,13:14:8.98:363,9,0	1/1:0,2:2:3.01:226,3,0
chr10	41269534	.	CGCGCGCGCGCGTGCAT	C	2970.72	PASS	AB=1.000;AC=26;AF=0.565;AN=46;BaseQRankSum=7.431;DP=268;FS=54.291;HRun=0;HaplotypeScore=149.2731;InbreedingCoeff=0.3439;MQ=55.54;MQ0=12;MQRankSum=-7.832;QD=19.54;ReadPosRankSum=5.366;VQSLOD=0.6088;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:21:48.16:0,48,3121	0/0:5,0:5:15.03:0,15,601	0/0:5,0:5:7.56:0,8,191	0/0:5,0:2:3.47:0,3,28	1/1:12,8:20:4.84:114,5,0	1/1:15,0:14:9.03:239,9,0	1/1:6,0:4:3.01:94,3,0	./.	1/1:3,0:3:3.01:105,3,0	0/1:12,0:12:99:352,0,131	1/1:11,0:11:3.01:38,3,0	0/0:4,0:4:12.04:0,12,743	1/1:6,0:5:9.03:301,9,0	1/1:6,5:9:6.02:241,6,0	./.	./.	1/1:6,2:4:9.03:399,9,0	1/1:1,0:1:3.01:93,3,0	0/1:13,0:12:75.22:75,0,389	./.	0/0:5,0:4:2.18:0,2,90	./.	0/0:14,0:13:32.90:0,33,1970	0/0:8,0:4:9.03:0,9,559	1/1:10,0:10:2.92:17,3,0	0/1:21,0:20:71.18:867,0,71	0/1:13,0:13:3.56:92,0,4	1/1:2,0:2:3.01:97,3,0
chr10	41269542	.	CGCGTGCAT	C	1268.21	PASS	AB=1.000;AC=24;AF=0.522;AN=46;BaseQRankSum=7.965;DP=281;FS=38.598;HRun=0;HaplotypeScore=137.0671;InbreedingCoeff=0.1870;MQ=68.34;MQ0=7;MQRankSum=-8.046;QD=7.83;ReadPosRankSum=5.751;VQSLOD=0.9858;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:20:45.15:0,45,1841	0/0:4,0:4:12.04:0,12,417	0/0:9,0:8:17.73:0,18,455	0/0:9,0:6:15:0,15,271	1/1:17,6:23:3.69:61,4,0	1/1:15,0:14:9.03:122,9,0	0/1:7,0:5:19.97:33,0,20	./.	0/1:4,0:4:24:43,0,24	0/1:12,0:12:91.14:127,0,91	1/1:11,0:11:2.98:22,3,0	0/0:5,0:5:15.05:0,15,560	1/1:6,0:5:9.03:128,9,0	1/1:8,2:10:6.02:139,6,0	./.	./.	1/1:8,1:6:12.04:282,12,0	0/1:2,0:2:19.97:27,0,20	0/1:13,0:12:19.64:20,0,160	./.	1/1:4,0:4:0.47:1,0,0	./.	0/0:18,0:17:48.16:0,48,1601	0/0:5,0:3:9.03:0,9,362	0/1:10,0:10:0:0,0,0	0/1:21,0:20:37.73:340,0,38	0/1:13,0:13:35.99:36,0,37	1/1:2,0:2:3.01:41,3,0
chr10	41269544	.	CGTGCAT	C	824.42	PASS	AB=1.000;AC=24;AF=0.480;AN=50;BaseQRankSum=8.337;DP=307;FS=47.713;HRun=0;HaplotypeScore=134.5720;InbreedingCoeff=0.2254;MQ=71.20;MQ0=5;MQRankSum=-7.994;QD=4.32;ReadPosRankSum=6.205;VQSLOD=0.6345;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:21:51.18:0,51,1668	0/0:4,0:4:12.04:0,12,363	0/0:10,0:9:20.72:0,21,528	0/0:11,0:8:8.50:0,8,326	1/1:14,9:23:3.65:48,4,0	1/1:15,0:14:8.96:77,9,0	0/1:12,0:10:15.91:16,0,43	0/0:3,0:3:8.97:0,9,80	0/1:10,0:9:24:28,0,24	0/1:12,0:12:71.91:72,0,91	1/1:11,0:11:3.01:31,3,0	0/0:6,0:6:18.06:0,18,544	1/1:6,0:5:8.94:88,9,0	1/1:10,0:10:6.02:113,6,0	./.	./.	1/1:9,0:6:12.04:241,12,0	0/1:4,0:3:9.97:10,0,41	0/1:13,0:12:8.68:9,0,126	./.	0/1:7,0:7:0:1,0,0	0/1:12,0:12:0.01:0,0,0	0/0:22,0:21:57.12:0,57,1613	0/0:4,0:4:12.04:0,12,371	0/1:10,0:10:0:0,0,0	0/1:21,0:20:37.97:198,0,38	0/1:13,0:13:22.02:22,0,35	1/1:3,0:3:3:27,3,0
chr10	41269548	.	CAT	C	76.08	PASS	AB=1.000;AC=9;AF=0.180;AN=50;BaseQRankSum=2.886;DP=311;FS=8.846;HRun=0;HaplotypeScore=127.5744;InbreedingCoeff=0.4770;MQ=73.13;MQ0=0;MQRankSum=-3.601;QD=1.25;ReadPosRankSum=0.907;VQSLOD=1.7599;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:54.19:0,54,1096	0/0:5,0:5:15.05:0,15,304	0/0:11,0:10:24.03:0,24,465	0/1:11,0:8:1.77:2,0,264	1/1:23,0:23:1.93:7,2,0	0/0:14,0:14:4.20:0,4,19	0/0:12,0:12:14.06:0,14,130	0/0:5,0:5:6.33:0,6,114	0/0:11,0:10:2.42:0,2,54	0/0:12,0:12:20.66:0,21,164	0/0:12,0:12:2.36:0,2,8	0/0:6,0:6:18.06:0,18,366	0/0:5,0:5:1.27:0,1,10	1/1:7,3:10:5.65:31,6,0	./.	1/1:5,3:8:3.01:46,3,0	1/1:4,5:6:11.99:109,12,0	0/0:4,0:3:8.97:0,9,85	0/0:11,0:11:16.29:0,16,184	./.	0/0:10,0:10:5.95:0,6,45	./.	0/0:21,0:21:57.12:0,57,1126	0/0:5,0:5:15.05:0,15,304	0/0:11,0:11:3:0,3,25	0/0:20,0:20:31:0,31,191	0/0:13,0:13:3.90:0,4,42	0/0:3,0:3:1.25:0,1,3
chr10	41271942	.	AAGG	A	1850.18	PASS	AB=0.618;AC=14;AF=0.250;AN=56;BaseQRankSum=9.391;DP=620;FS=1.813;HRun=0;HaplotypeScore=107.6270;InbreedingCoeff=0.8045;MQ=52.27;MQ0=18;MQRankSum=-7.462;QD=28.91;ReadPosRankSum=-5.470;VQSLOD=2.7175;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:87.20:0,87,1692	0/0:9,0:9:27.09:0,27,580	0/0:46,0:16:21.06:0,21,317	0/0:69,0:20:4.69:0,5,424	0/0:29,0:28:69.24:0,69,1412	0/0:22,0:22:60.21:0,60,1217	0/0:22,0:22:60.18:0,60,1214	0/0:24,0:24:54.18:0,54,1026	0/1:2,4:6:0.40:214,0,0	1/1:0,10:10:30.07:439,30,0	1/1:1,10:11:27.09:394,27,0	0/0:26,0:25:72.25:0,72,1480	1/1:1,5:6:11.91:185,12,0	0/0:21,0:21:60.21:0,60,1243	1/1:1,6:7:17.60:278,18,0	0/0:21,0:21:60.20:0,60,1198	0/0:20,0:21:30.29:0,30,934	0/1:3,4:7:29.19:42,0,29	0/0:25,0:24:57.20:0,57,1158	0/0:34,0:34:84.29:0,84,1711	0/0:39,0:38:99:0,111,2283	1/1:2,9:11:27.05:391,27,0	0/0:19,0:19:54.16:0,54,1080	0/0:30,1:31:31.87:0,32,1410	1/1:1,5:6:6.02:93,6,0	0/0:30,0:30:84.27:0,84,1686	0/0:21,0:21:57.18:0,57,1170	0/0:7,0:7:14.97:0,15,274
chr10	41276944	.	ATT	A	12796.30	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=1.604;DP=578;FS=4.868;HRun=11;HaplotypeScore=76.7440;InbreedingCoeff=0.9938;MQ=73.81;MQ0=3;MQRankSum=-2.383;QD=25.54;ReadPosRankSum=3.685;VQSLOD=5.0209;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:69.23:0,69,1060	0/0:15,0:15:39.13:0,39,600	0/0:19,0:17:28.96:0,29,327	0/0:15,0:12:26.12:0,26,259	1/1:4,22:27:54.04:630,54,0	1/1:1,31:33:72.12:822,72,0	1/1:3,14:17:39.09:415,39,0	1/1:8,19:27:57.06:589,57,0	1/1:4,26:30:63.14:670,63,0	1/1:1,26:26:72.15:756,72,0	1/1:5,17:22:42.02:447,42,0	1/1:4,15:19:39.08:415,39,0	1/1:2,17:19:45.10:479,45,0	1/1:2,17:19:48.11:511,48,0	1/1:1,23:24:63.15:671,63,0	1/1:1,13:14:36.09:383,36,0	1/1:3,20:22:57.12:607,57,0	1/1:0,9:10:14.22:243,14,0	1/1:1,20:21:57.10:594,57,0	1/1:1,24:25:66.10:690,66,0	1/1:1,16:17:45.11:479,45,0	1/1:1,14:15:42.10:447,42,0	1/1:2,14:16:33.08:351,33,0	1/1:0,10:11:29.81:299,30,0	1/1:1,17:18:39.10:415,39,0	1/1:2,24:26:69.15:734,69,0	1/1:3,23:26:69.15:734,69,0	1/1:2,13:15:39.07:415,39,0
chr10	41278913	.	GAAGGAGAA	G	5218.82	PASS	AC=12;AF=0.222;AN=54;BaseQRankSum=8.012;DP=442;FS=1.026;HRun=0;HaplotypeScore=130.9150;InbreedingCoeff=0.9618;MQ=74.81;MQ0=0;MQRankSum=-8.231;QD=51.16;ReadPosRankSum=-1.724;VQSLOD=4.4336;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:81.28:0,81,3429	0/0:4,0:4:12.04:0,12,527	0/0:17,0:17:46.40:0,46,1880	0/0:23,0:23:63.22:0,63,2504	0/0:19,0:19:45.15:0,45,1875	0/0:18,0:18:54.19:0,54,2329	0/0:26,0:25:63.22:0,63,2631	1/1:6,28:33:81.24:2001,81,0	0/0:11,0:11:27.09:0,27,1106	0/0:11,0:11:24.07:0,24,946	0/0:6,0:6:15.05:0,15,651	0/0:16,0:16:48.16:0,48,2035	0/0:15,0:15:36.12:0,36,1580	0/0:22,0:22:60.21:0,60,2638	0/0:14,0:14:39.13:0,39,1679	0/0:19,0:19:57.20:0,57,2334	0/0:17,0:15:36.12:0,36,1583	0/0:13,0:13:39.13:0,39,1661	1/1:3,8:11:24.07:507,24,0	1/1:0,13:13:24.08:671,24,0	1/1:3,9:10:4.92:166,5,0	0/0:12,0:12:30.10:0,30,1300	0/0:10,0:10:27.09:0,27,1185	0/0:24,0:24:69.24:0,69,2958	0/0:14,0:14:27.09:0,27,1188	1/1:5,13:18:36.12:951,36,0	1/1:2,12:14:33.11:923,33,0	./.
chr10	41278997	.	A	ACG	694.19	PASS	AB=0.872;AC=11;AF=0.204;AN=54;BaseQRankSum=1.889;DP=543;FS=8.750;HRun=0;HaplotypeScore=117.8332;InbreedingCoeff=0.0860;MQ=43.63;MQ0=10;MQRankSum=-1.131;QD=4.23;ReadPosRankSum=3.307;VQSLOD=2.1229;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:35:57.21:0,57,443	0/0:8,0:8:24.01:0,24,259	0/0:21,0:6:14.97:0,15,133	0/0:31,0:13:11.74:0,12,211	0/0:26,0:26:14.27:0,14,98	0/0:21,0:21:8.26:0,8,180	0/0:18,0:16:16.75:0,17,128	0/1:29,0:26:91.58:92,0,221	0/0:14,0:12:2.43:0,2,23	0/0:27,0:25:69.33:0,69,556	0/0:16,0:16:18.44:0,18,149	0/1:14,0:14:0.63:1,0,40	0/0:15,0:15:21.38:0,21,167	0/0:19,0:16:11.56:0,12,92	0/0:18,0:14:8.99:0,9,74	0/0:23,0:22:19.22:0,19,222	0/0:18,0:17:8.12:0,8,46	0/0:8,0:7:13.87:0,14,108	0/1:13,0:12:51.01:51,0,91	1/1:24,1:27:23.70:232,24,0	1/1:9,0:7:2.04:6,2,0	./.	0/1:22,0:21:3.99:4,0,59	0/0:20,0:19:1.60:0,2,91	0/0:29,0:27:11.23:0,11,157	0/1:8,11:19:34.63:148,0,35	0/1:21,0:24:40.07:252,0,40	0/1:2,0:7:25.78:45,0,26
chr10	41279009	.	AAAT	A	781.75	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=3.559;DP=445;FS=0.765;HRun=0;HaplotypeScore=91.4774;InbreedingCoeff=0.8543;MQ=49.38;MQ0=5;MQRankSum=-0.221;QD=15.63;ReadPosRankSum=-0.735;VQSLOD=2.9155;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:36:66.96:0,67,1131	0/0:7,0:7:18.06:0,18,378	0/0:15,0:11:33.11:0,33,648	0/0:16,0:10:24.08:0,24,467	1/1:17,0:19:28.83:323,29,0	0/0:12,0:12:36.12:0,36,722	0/0:14,0:14:33.11:0,33,630	0/0:26,0:23:51.18:0,51,1063	0/0:10,0:9:15.05:0,15,293	0/0:27,0:26:66.23:0,66,1361	0/0:16,0:16:39.13:0,39,741	0/0:16,0:16:24.08:0,24,458	0/0:12,0:12:24.08:0,24,494	1/1:16,0:13:23.91:260,24,0	0/0:13,0:10:23.86:0,24,410	1/1:13,0:15:30.89:339,31,0	0/0:5,10:14:1.25:0,1,3	0/0:8,0:7:18.06:0,18,367	0/0:13,0:12:30.10:0,30,596	0/0:22,0:22:60.07:0,60,1054	0/0:5,0:5:12.04:0,12,232	0/0:5,0:3:3.01:0,3,63	0/0:20,0:19:29.71:0,30,413	0/0:18,0:17:23.74:0,24,451	0/0:24,0:22:63.21:0,63,1211	0/0:19,0:19:41.94:0,42,870	0/0:19,0:19:48.16:0,48,945	0/0:6,0:6:9.03:0,9,150
chr10	41279011	.	AT	A	483.18	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=5.051;DP=427;FS=0.000;HRun=1;HaplotypeScore=80.4198;InbreedingCoeff=0.8540;MQ=50.07;MQ0=4;MQRankSum=-0.810;QD=9.66;ReadPosRankSum=-0.790;VQSLOD=0.8643;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:34:74.66:0,75,883	0/0:6,0:6:18.06:0,18,281	0/0:15,0:11:33.11:0,33,515	0/0:13,0:9:24.08:0,24,373	1/1:5,14:19:28.95:232,29,0	0/0:12,0:12:36.12:0,36,534	0/0:13,0:13:33.07:0,33,453	0/0:25,0:22:60.12:0,60,864	0/0:9,0:8:15.05:0,15,212	0/0:27,0:26:66.41:0,66,1032	0/0:16,0:16:39.03:0,39,521	0/0:16,0:16:23.79:0,24,339	0/0:11,0:11:24.01:0,24,364	1/1:4,12:13:23.80:172,24,0	0/0:12,0:10:23.50:0,23,272	1/1:2,13:15:32.46:221,32,0	0/0:11,2:12:1.25:0,1,3	0/0:8,0:7:18.06:0,18,273	0/0:13,0:13:36.01:0,36,487	0/0:21,0:21:58.64:0,59,724	0/0:5,0:5:12.04:0,12,166	0/0:3,0:2:3.01:0,3,47	0/0:20,0:19:26.86:0,27,271	0/0:18,0:17:22.97:0,23,310	0/0:22,0:21:63.07:0,63,854	0/0:19,0:19:47.53:0,48,683	0/0:19,0:19:50.87:0,51,722	0/0:6,0:6:9.02:0,9,102
chr10	41279480	.	CACACACACACAA	C	2264.17	PASS	AB=0.998;AC=32;AF=0.571;AN=56;BaseQRankSum=3.148;DP=471;FS=6.965;HRun=0;HaplotypeScore=156.6704;InbreedingCoeff=-0.2159;MQ=47.61;MQ0=36;MQRankSum=0.773;QD=5.27;ReadPosRankSum=-0.202;VQSLOD=2.2014;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:28:18.52:19,0,904	1/1:3,0:3:5.37:35,5,0	0/1:39,0:5:2.94:3,0,26	0/1:46,0:10:13.59:14,0,126	1/1:3,13:16:9.36:60,9,0	1/1:11,0:8:6.59:50,7,0	1/1:19,0:20:2.26:103,2,0	0/1:23,0:21:99:182,0,304	0/0:11,0:11:12.04:0,12,356	0/1:19,0:19:99:185,0,432	0/0:7,0:7:0.89:0,1,2	0/1:13,0:12:31.26:123,0,31	0/0:17,0:17:14.35:0,14,158	0/1:14,0:14:92.07:216,0,92	0/1:15,0:14:30.98:31,0,356	1/1:8,0:8:14.28:109,14,0	1/1:27,2:28:46.36:630,46,0	0/1:17,0:17:99:157,0,790	1/1:5,0:3:8.66:51,9,0	0/1:6,0:6:11.96:12,0,48	0/1:49,0:46:99:236,0,267	1/1:8,0:8:0.89:2,1,0	0/1:9,0:8:0:0,0,0	0/1:21,0:21:44.71:45,0,81	0/1:14,0:14:59.97:60,0,421	0/1:12,0:11:47.40:47,0,168	0/0:6,0:6:6.44:0,6,91	0/1:4,0:4:50.10:54,0,50
chr10	41279482	.	CACACACACAA	C	2488.14	PASS	AB=0.996;AC=33;AF=0.589;AN=56;BaseQRankSum=2.196;DP=463;FS=5.182;HRun=0;HaplotypeScore=146.2840;InbreedingCoeff=-0.1767;MQ=49.23;MQ0=34;MQRankSum=1.442;QD=6.46;ReadPosRankSum=0.886;VQSLOD=2.2336;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:24:21.57:22,0,647	1/1:3,0:3:5.37:35,5,0	0/0:41,0:7:0.02:0,0,45	0/1:44,0:10:15.07:15,0,114	1/1:16,0:16:8.42:59,8,0	1/1:11,0:8:0.23:63,0,0	1/1:3,17:20:2.28:91,2,0	0/1:24,0:22:99:216,0,211	0/0:14,0:14:12.04:0,12,260	0/1:18,0:18:99:190,0,285	0/0:7,0:7:0.89:0,1,2	1/1:13,0:12:6.70:105,7,0	0/0:16,0:16:10.04:0,10,96	0/1:13,0:13:7.29:274,0,7	0/1:15,0:15:51.90:52,0,306	1/1:9,0:9:17.99:156,18,0	1/1:29,0:28:67.37:625,67,0	0/1:19,0:19:99:198,0,635	1/1:5,0:3:8.66:51,9,0	0/1:5,0:5:12.03:12,0,12	0/1:46,0:43:99:256,0,140	1/1:8,0:8:0.89:2,1,0	0/1:8,0:7:0:0,0,0	0/1:19,0:19:7.48:51,0,7	0/1:14,0:14:59.99:60,0,305	0/1:11,0:10:50.93:51,0,67	0/1:6,0:6:0.40:0,0,58	0/1:4,0:4:10.02:54,0,10
chr10	41279486	.	CACACAA	C	2725.72	PASS	AB=0.994;AC=41;AF=0.732;AN=56;BaseQRankSum=-0.771;DP=447;FS=5.634;HRun=0;HaplotypeScore=127.4762;InbreedingCoeff=-0.0221;MQ=52.06;MQ0=32;MQRankSum=1.778;QD=6.40;ReadPosRankSum=1.085;VQSLOD=2.1935;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:24:97.43:97,0,230	1/1:3,0:3:5.37:35,5,0	0/1:44,0:8:2.41:2,0,35	0/1:46,0:12:34.98:35,0,59	1/1:15,0:16:8.88:59,9,0	1/1:12,0:9:12.25:98,12,0	0/1:20,0:20:8.12:8,0,13	0/1:24,0:23:36.60:294,0,37	0/0:13,0:13:8.99:0,9,74	0/1:17,0:17:95.49:222,0,95	0/0:8,0:8:0.89:0,1,2	1/1:11,0:10:7.14:101,7,0	0/1:13,1:14:15.03:15,0,21	1/1:10,0:10:20.62:203,21,0	0/1:15,0:14:53.92:54,0,145	1/1:8,0:8:15.47:131,15,0	1/1:27,0:26:64.77:547,65,0	0/1:19,0:19:99:177,0,340	1/1:6,0:4:11.60:69,12,0	1/1:3,0:3:2.94:18,3,0	1/1:41,0:39:42.92:327,43,0	1/1:7,0:7:0.47:1,0,0	0/1:7,0:6:0:0,0,0	1/1:19,0:19:11.45:84,11,0	0/1:13,0:13:67.13:67,0,117	1/1:12,0:11:14.20:90,14,0	1/1:1,4:5:2.96:74,3,0	1/1:3,0:3:8.94:66,9,0
chr10	41279488	.	CACAA	C	2680.77	PASS	AB=0.963;AC=40;AF=0.714;AN=56;BaseQRankSum=-0.897;DP=443;FS=5.212;HRun=0;HaplotypeScore=120.2524;InbreedingCoeff=-0.0320;MQ=54.74;MQ0=31;MQRankSum=0.258;QD=6.35;ReadPosRankSum=2.565;VQSLOD=2.1519;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:24:47.08:105,0,47	1/1:3,0:3:5.37:35,5,0	0/1:47,0:10:4.93:5,0,35	0/1:47,0:12:29.26:29,0,68	1/1:16,0:16:8.88:59,9,0	1/1:12,0:9:12.11:98,12,0	0/1:19,0:19:2.96:3,0,4	0/1:24,0:23:10.51:295,0,11	0/0:13,0:13:0:0,0,0	0/1:15,0:15:5.51:251,0,6	0/0:8,0:8:0.89:0,1,2	1/1:10,1:10:8.68:82,9,0	0/1:3,11:14:3.65:12,0,4	1/1:10,0:10:20.75:189,21,0	0/1:15,0:14:58.63:59,0,71	1/1:8,0:8:15:131,15,0	1/1:26,0:26:65.16:530,65,0	0/1:19,0:19:99:181,0,165	1/1:6,0:4:11.60:69,12,0	1/1:3,0:3:2.94:18,3,0	1/1:38,1:37:40.03:316,40,0	0/1:8,0:8:0.38:0,0,0	0/1:7,0:6:0:0,0,0	1/1:18,0:18:8.77:62,9,0	0/1:13,0:13:60.45:88,0,60	1/1:9,1:9:14.20:90,14,0	1/1:5,0:5:2.67:42,3,0	1/1:3,0:3:8.94:66,9,0
chr10	41279490	.	CAA	C	3375.92	PASS	AB=0.913;AC=45;AF=0.804;AN=56;BaseQRankSum=-4.171;DP=456;FS=3.098;HRun=2;HaplotypeScore=115.7097;InbreedingCoeff=0.0285;MQ=57.02;MQ0=31;MQRankSum=-0.166;QD=7.54;ReadPosRankSum=3.219;VQSLOD=0.8411;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:24:34.56:263,35,0	1/1:3,0:3:5.37:35,5,0	0/1:50,0:12:8.61:9,0,35	0/1:49,0:12:19.85:20,0,73	1/1:16,0:16:8.89:59,9,0	1/1:12,0:9:12.18:98,12,0	0/1:19,0:19:0.75:32,0,1	1/1:24,0:23:12.65:309,13,0	1/1:0,11:11:3.01:44,3,0	1/1:14,1:16:42.19:379,42,0	0/0:1,7:8:0.88:0,1,2	1/1:11,0:10:6.71:58,7,0	0/1:13,0:14:8.13:11,0,8	1/1:11,1:12:26.90:229,27,0	0/1:15,1:15:13.46:124,0,13	1/1:9,0:9:17.99:155,18,0	1/1:28,0:28:71.64:563,72,0	0/1:18,1:19:24.68:236,0,25	1/1:2,4:4:11.60:69,12,0	1/1:0,3:3:2.94:18,3,0	1/1:42,0:40:34.84:328,35,0	0/1:0,8:8:0:0,0,0	0/1:7,0:7:0:0,0,0	1/1:18,0:18:8.58:63,9,0	0/1:12,0:12:1:91,0,1	1/1:2,8:9:14.53:90,15,0	1/1:5,0:5:2.83:28,3,0	1/1:3,0:3:8.94:66,9,0
chr10	41279499	.	AGCTG	A	234.31	PASS	AB=0.958;AC=10;AF=0.179;AN=56;BaseQRankSum=3.934;DP=488;FS=6.984;HRun=0;HaplotypeScore=142.9712;InbreedingCoeff=-0.1369;MQ=59.35;MQ0=30;MQRankSum=-4.361;QD=1.28;ReadPosRankSum=-2.517;VQSLOD=1.6909;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:16.47:0,16,928	0/0:5,0:5:3.50:0,3,166	0/1:60,0:13:11.49:11,0,173	0/1:50,0:13:68.64:69,0,136	0/0:17,0:17:24.55:0,25,463	0/0:14,0:12:16.82:0,17,323	0/0:21,0:21:6.02:0,6,116	0/0:31,0:29:21.17:0,21,571	0/0:12,0:11:7.27:0,7,120	0/0:17,0:18:34.29:0,34,844	0/0:8,0:8:3.90:0,4,69	0/1:7,2:9:46.76:47,0,74	0/1:14,0:15:55.51:56,0,165	0/0:12,0:12:27.09:0,27,527	0/0:13,0:13:18.49:0,18,300	0/0:12,0:12:26.69:0,27,523	0/0:31,0:31:81.17:0,81,1493	0/0:16,0:16:1.49:0,1,757	0/0:7,0:4:8.42:0,8,120	0/0:4,0:4:3.01:0,3,44	0/0:41,1:42:28.31:0,28,452	0/0:8,0:8:2.63:0,3,60	1/1:6,1:7:1.55:4,2,0	0/1:18,0:18:62.14:102,0,62	0/0:11,0:11:13.57:0,14,330	0/1:12,1:12:35.53:36,0,243	0/1:6,0:6:37.32:37,0,45	0/1:3,0:3:0.14:0,0,66
chr10	41279502	.	T	TAC	154.29	PASS	AB=0.747;AC=5;AF=0.089;AN=56;BaseQRankSum=3.023;DP=507;FS=5.887;HRun=0;HaplotypeScore=142.5840;InbreedingCoeff=0.1042;MQ=59.28;MQ0=29;MQRankSum=-0.193;QD=1.71;ReadPosRankSum=-1.660;VQSLOD=1.9697;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:23:26.92:0,27,789	0/0:5,0:5:8.81:0,9,146	0/0:60,0:13:30.54:0,31,267	0/1:52,0:14:8.44:8,0,118	0/0:16,0:17:24.08:0,24,363	0/0:13,0:12:17.89:0,18,270	0/0:22,0:22:8.96:0,9,140	0/0:30,0:31:61.53:0,62,426	0/0:12,0:11:8.86:0,9,112	0/0:18,0:17:41.08:0,41,710	0/0:8,0:8:2.88:0,3,49	0/1:5,4:11:25.15:25,0,46	0/0:17,0:17:20.33:0,20,243	0/0:12,0:12:26.96:0,27,435	0/0:13,0:13:17.85:0,18,277	0/0:12,0:12:27.09:0,27,428	0/0:31,0:31:81.27:0,81,1272	0/0:18,0:18:48.69:0,49,674	0/0:8,0:4:8.99:0,9,78	0/0:4,0:4:3:0,3,27	0/0:40,0:42:52.25:0,52,393	0/0:9,0:9:2.60:0,3,48	1/1:3,5:8:3.01:49,3,0	0/1:5,13:19:31.11:179,0,31	0/0:13,0:13:20.99:0,21,333	0/0:16,0:15:23.33:0,23,190	0/0:6,0:6:6.29:0,6,49	0/0:4,0:4:6.86:0,7,48
chr10	41279643	.	TCTTCTTTC	T	2126.88	PASS	AB=1.000;AC=21;AF=0.389;AN=54;BaseQRankSum=-2.074;DP=567;FS=0.698;HRun=0;HaplotypeScore=153.4276;InbreedingCoeff=0.7115;MQ=67.69;MQ0=8;MQRankSum=-2.757;QD=9.89;ReadPosRankSum=-2.087;VQSLOD=2.1913;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:54.18:0,54,1714	0/0:8,0:8:6.02:0,6,153	0/0:25,0:19:1.25:0,1,3	./.	0/0:33,0:33:60.21:0,60,2265	1/1:10,11:21:12.04:280,12,0	1/1:22,16:37:3.01:72,3,0	0/0:34,0:32:9.03:0,9,116	1/1:6,7:13:3.01:75,3,0	1/1:11,9:20:27.09:526,27,0	1/1:10,10:20:23.98:440,24,0	0/0:16,0:16:8.34:0,8,178	1/1:9,12:21:9.03:219,9,0	0/0:10,0:10:8.96:0,9,177	1/1:10,10:20:6.02:147,6,0	0/1:19,0:19:41.72:42,0,1008	0/0:29,0:29:51.13:0,51,1489	1/1:9,0:9:6.02:83,6,0	0/0:11,0:10:9.03:0,9,121	0/0:17,0:17:21.07:0,21,275	0/0:14,0:14:23.09:0,23,273	1/1:7,5:12:6.02:150,6,0	0/0:26,0:26:58.82:0,59,728	0/0:35,0:35:49.96:0,50,636	1/1:13,9:22:12.04:282,12,0	0/0:21,0:20:27.08:0,27,348	0/0:15,0:15:34.80:0,35,404	0/0:9,0:8:6.02:0,6,81
chr10	41279651	.	CCTT	C	6891.14	PASS	AB=1.000;AC=26;AF=0.464;AN=56;BaseQRankSum=10.585;DP=528;FS=0.797;HRun=0;HaplotypeScore=83.7054;InbreedingCoeff=0.5440;MQ=63.77;MQ0=11;MQRankSum=-3.620;QD=23.68;ReadPosRankSum=2.114;VQSLOD=4.8676;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:83.95:0,84,1740	0/0:9,0:9:27.07:0,27,524	0/0:22,0:16:39.08:0,39,684	0/0:16,0:11:7.53:0,8,233	0/0:33,0:33:93.32:0,93,2029	0/1:20,0:20:5.69:6,0,472	0/0:35,0:34:33.07:0,33,814	1/1:3,25:24:63.14:999,63,0	0/0:12,0:12:0.44:0,0,223	0/1:16,0:16:13.95:14,0,413	0/1:19,0:19:8.86:9,0,451	1/1:1,14:15:30.10:498,30,0	0/1:18,0:18:17.95:18,0,218	0/0:8,0:8:15.05:0,15,322	0/1:16,0:16:5.62:6,0,275	0/0:16,0:17:35.34:0,35,861	0/0:30,0:29:71.87:0,72,1471	0/0:10,0:10:21.78:0,22,394	1/1:4,7:8:18.06:299,18,0	1/1:0,12:13:36.05:561,36,0	1/1:0,12:12:24.08:398,24,0	0/0:12,0:12:0.81:0,1,384	1/1:0,24:24:66.23:1097,66,0	1/1:6,30:36:64.35:1142,64,0	0/1:20,0:20:6.34:6,0,489	1/1:1,18:18:51.17:842,51,0	1/1:0,15:15:39.13:649,39,0	1/1:2,7:8:21.07:349,21,0
chr10	41279740	.	TTTTC	T	2750.04	PASS	AB=1.000;AC=16;AF=0.286;AN=56;BaseQRankSum=-2.659;DP=642;FS=12.652;HRun=0;HaplotypeScore=167.1503;InbreedingCoeff=0.5916;MQ=53.85;MQ0=5;MQRankSum=-0.508;QD=13.48;ReadPosRankSum=0.539;VQSLOD=2.5287;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:60.40:0,60,930	0/0:9,0:9:27.05:0,27,427	0/0:16,0:8:21.02:0,21,213	0/0:24,0:15:25.10:0,25,257	0/0:32,0:31:41.68:0,42,403	0/0:25,0:24:8.54:0,9,354	0/0:24,0:22:5.19:0,5,134	1/1:15,6:19:33.96:299,34,0	0/0:20,0:20:45.03:0,45,601	0/0:32,0:30:87.55:0,88,1410	0/0:24,0:24:51.99:0,52,767	1/1:18,0:18:48.50:619,48,0	0/0:29,0:29:71.83:0,72,1019	0/0:19,0:18:10.06:0,10,162	0/0:30,0:30:57.57:0,58,860	0/0:26,0:26:25.56:0,26,224	0/0:32,0:32:36.24:0,36,296	0/0:26,0:25:73.32:0,73,1044	1/1:19,0:17:16.62:241,17,0	0/1:19,0:19:51.17:61,0,51	1/1:11,0:10:15.92:128,16,0	0/0:23,0:22:59.93:0,60,777	1/1:24,0:24:25.31:748,25,0	1/1:23,0:23:5.60:554,6,0	0/0:21,0:20:51.09:0,51,739	0/1:32,0:32:99:154,0,103	0/1:23,0:22:16.70:98,0,17	0/1:13,0:13:35.39:35,0,75
chr10	41281027	.	TTATATATATATA	T	7392.42	PASS	AB=0.750;AC=27;AF=0.500;AN=54;BaseQRankSum=0.414;DP=307;FS=3.175;HRun=0;HaplotypeScore=104.7816;InbreedingCoeff=0.7252;MQ=70.12;MQ0=5;MQRankSum=-6.878;QD=45.92;ReadPosRankSum=4.077;VQSLOD=4.0682;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:10:21.04:0,21,910	0/0:1,0:5:12.04:0,12,632	0/0:16,0:9:3.01:0,3,42	0/0:26,0:11:7.67:0,8,58	0/0:5,0:8:9.01:0,9,150	1/1:8,15:22:35.75:1274,36,0	1/1:4,4:8:9.03:319,9,0	0/0:18,0:21:33.11:0,33,1324	1/1:7,2:9:3.01:106,3,0	1/1:6,16:22:42.12:1345,42,0	1/1:9,11:20:24.08:755,24,0	1/1:3,5:8:9.03:319,9,0	1/1:6,4:10:12.04:424,12,0	0/0:3,0:6:9.03:0,9,111	1/1:1,5:6:15.05:531,15,0	0/0:4,0:4:9.03:0,9,205	0/0:9,0:17:21.04:0,21,442	1/1:5,9:14:18.06:637,18,0	0/0:2,0:4:9.03:0,9,210	0/0:6,0:6:3.01:0,3,50	./.	1/1:5,4:9:9.03:318,9,0	1/1:6,2:8:6.02:212,6,0	1/1:4,1:5:3.01:106,3,0	1/1:5,11:16:27.09:945,27,0	0/1:2,1:3:99:100,0,128	0/0:8,0:9:12.04:0,12,387	0/0:4,0:11:21.07:0,21,743
chr10	41282510	.	CT	C	7469.04	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=14.655;DP=624;FS=4.125;HRun=3;HaplotypeScore=62.6256;InbreedingCoeff=0.9991;MQ=80.18;MQ0=0;MQRankSum=-1.207;QD=33.64;ReadPosRankSum=0.459;VQSLOD=5.3070;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:86.90:0,87,1228	0/0:14,0:14:39.11:0,39,542	0/0:18,0:18:53.99:0,54,690	0/0:15,0:15:29.20:0,29,446	0/0:33,0:33:99:0,99,1408	0/0:27,0:27:81.27:0,81,1166	0/0:13,0:13:36.12:0,36,518	1/1:0,33:33:99:1159,99,0	0/0:24,0:24:69.23:0,69,994	0/0:31,0:31:93.29:0,93,1303	0/0:35,0:35:99:0,105,1511	1/1:0,9:9:21.07:260,21,0	0/0:20,0:20:60.19:0,60,847	0/0:16,0:16:45.14:0,45,630	0/0:25,0:25:75.24:0,75,1062	0/0:11,0:11:33.11:0,33,475	0/0:17,0:17:50.84:0,51,701	0/0:22,0:22:63.21:0,63,890	1/1:0,21:21:63.19:769,63,0	1/1:2,31:33:90.24:1098,90,0	1/1:0,13:13:36.11:446,36,0	0/0:22,0:22:63.20:0,63,889	1/1:1,15:16:45.14:558,45,0	1/1:0,18:18:48.15:595,48,0	0/0:27,0:27:81.25:0,81,1133	1/1:1,25:26:35.02:874,35,0	1/1:0,39:39:99:1338,108,0	1/1:2,12:14:30.09:372,30,0
chr10	41284433	.	TACACACACACACACACACACACAC	T	2625.27	PASS	AB=0.880;AC=14;AF=0.250;AN=56;BaseQRankSum=4.323;DP=508;FS=3.365;HRun=0;HaplotypeScore=259.4693;InbreedingCoeff=0.6715;MQ=60.78;MQ0=18;MQRankSum=-4.591;QD=22.25;ReadPosRankSum=1.548;VQSLOD=2.3538;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:23:27.54:0,28,1633	0/0:8,0:8:14.10:0,14,608	0/0:35,0:17:9.03:0,9,364	0/0:46,0:23:24.55:0,25,1279	0/0:11,0:11:12.04:0,12,966	0/0:11,0:21:15.05:0,15,472	0/0:22,0:22:26.88:0,27,576	1/1:17,0:17:3.01:54,3,0	0/0:15,0:15:14.97:0,15,777	0/1:17,1:17:99:150,0,2367	0/0:8,0:8:9.03:0,9,666	0/0:19,0:19:33.45:0,33,2535	0/0:17,0:18:39.13:0,39,2603	0/0:14,0:13:21.54:0,22,1692	0/0:24,0:24:28.86:0,29,2327	0/0:12,0:11:27.08:0,27,1976	0/0:18,0:17:27.09:0,27,1680	0/0:14,0:12:27.01:0,27,1448	1/1:13,3:14:12.04:755,12,0	1/1:5,3:8:6.01:60,6,0	1/1:19,0:18:9:114,9,0	0/0:19,0:18:27.09:0,27,2173	0/0:16,0:15:21.05:0,21,1703	0/0:25,0:20:30.02:0,30,2593	0/0:14,0:13:21.54:0,22,1795	0/1:10,3:12:99:551,0,453	1/1:5,12:17:8.40:558,8,0	1/1:5,3:8:9.03:554,9,0
chr10	41284457	.	C	CT	331.64	PASS	AB=0.794;AC=8;AF=0.143;AN=56;BaseQRankSum=1.937;DP=477;FS=8.499;HRun=0;HaplotypeScore=105.3993;InbreedingCoeff=0.3535;MQ=37.96;MQ0=54;MQRankSum=-5.108;QD=5.62;ReadPosRankSum=-3.042;VQSLOD=2.0523;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:28:30.05:0,30,401	0/0:6,0:6:12.46:0,12,144	0/0:12,0:2:6.02:0,6,83	0/0:25,0:6:18.06:0,18,250	0/0:15,0:14:9.03:0,9,126	0/0:26,0:26:14.92:0,15,142	0/0:33,0:24:18.19:0,18,192	1/1:5,2:5:2.91:21,3,0	0/0:15,0:13:12.02:0,12,146	0/0:18,0:17:50.33:0,50,644	0/0:6,0:5:5.98:0,6,81	0/0:19,0:18:36.12:0,36,489	0/0:18,0:17:39.07:0,39,532	0/0:21,0:18:24.08:0,24,333	0/0:25,0:24:33.07:0,33,449	0/0:17,0:14:24.06:0,24,299	0/0:18,0:15:30.55:0,31,399	0/0:16,0:11:24.08:0,24,326	0/1:14,2:12:39.80:159,0,40	1/1:5,3:7:1.48:32,1,0	1/1:12,2:8:0.47:1,0,0	0/0:19,0:16:24.08:0,24,323	0/0:16,0:15:18.06:0,18,241	0/0:28,0:20:33.11:0,33,445	0/0:13,0:12:27.09:0,27,369	0/1:8,6:12:66.33:230,0,66	0/0:14,0:13:6.93:0,7,22	0/0:4,0:3:6.26:0,6,19
chr10	41284473	.	CAGAGAG	C	180.07	PASS	AB=1.000;AC=17;AF=0.340;AN=50;BaseQRankSum=0.738;DP=482;FS=28.582;HRun=0;HaplotypeScore=130.5065;InbreedingCoeff=0.1261;MQ=36.92;MQ0=66;MQRankSum=1.545;QD=0.73;ReadPosRankSum=-0.414;VQSLOD=0.9795;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:36,0:30:13.29:22,0,13	1/1:4,0:4:0.89:2,1,0	./.	./.	0/1:16,0:14:0:0,0,0	0/0:18,0:18:2.29:0,2,6	1/1:26,0:16:0.77:3,1,0	0/0:17,0:14:17:0,17,86	1/1:12,0:10:2.91:40,3,0	0/1:21,0:19:72.12:72,0,114	0/1:9,0:6:0:0,0,0	0/1:20,0:17:3.51:4,0,20	0/1:19,0:18:25.19:90,0,25	0/0:20,0:17:6.02:0,6,137	0/0:22,0:21:4.76:0,5,148	0/0:23,0:19:15.52:0,16,374	0/0:15,0:11:11.98:0,12,168	0/0:17,0:11:10.24:0,10,130	0/0:22,0:17:9.93:0,10,89	0/0:14,0:13:0.15:0,0,14	./.	1/1:14,8:19:0.26:1,0,0	0/1:17,0:16:0:0,0,0	0/1:32,0:24:23.27:40,0,23	0/1:12,0:11:5.84:21,0,6	0/0:21,0:19:29.04:0,29,442	0/0:20,0:18:8.90:0,9,125	0/0:5,0:3:0:0,0,0
chr10	41284525	.	AAG	A	2783.81	PASS	AB=0.991;AC=20;AF=0.357;AN=56;BaseQRankSum=2.643;DP=589;FS=1.449;HRun=0;HaplotypeScore=103.7119;InbreedingCoeff=0.4764;MQ=53.03;MQ0=55;MQRankSum=0.099;QD=9.50;ReadPosRankSum=-3.431;VQSLOD=3.0250;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:31:41.66:0,42,552	0/0:7,0:7:8.06:0,8,101	0/0:28,0:6:17.38:0,17,191	0/1:49,1:21:12.05:12,0,345	0/0:14,0:13:18.06:0,18,273	1/1:16,2:18:35.68:379,36,0	1/1:7,7:10:8.10:47,8,0	1/1:5,20:24:57.03:658,57,0	0/0:16,0:14:27:0,27,351	0/0:32,5:35:1.49:0,1,991	0/0:13,0:12:14.41:0,14,213	0/1:20,0:18:11.07:11,0,59	0/0:20,0:20:33.07:0,33,437	0/0:18,0:17:39.13:0,39,586	0/0:13,0:13:26.35:0,26,404	0/0:25,0:22:54.14:0,54,795	0/0:19,0:16:39.51:0,40,552	0/0:16,0:12:25.16:0,25,318	1/1:21,0:17:7.12:237,7,0	1/1:24,0:23:33.03:394,33,0	1/1:22,0:18:36.06:410,36,0	0/0:22,0:22:36.11:0,36,524	0/0:14,0:14:0.59:0,1,1	0/1:27,0:24:21.50:57,0,22	0/1:19,0:17:19.16:19,0,422	0/1:29,1:28:6.53:458,0,7	0/1:17,0:16:11.93:146,0,12	1/1:6,0:5:12.04:146,12,0
chr10	41284609	.	TC	T	6986.21	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=16.319;DP=619;FS=5.686;HRun=3;HaplotypeScore=78.5945;InbreedingCoeff=0.9970;MQ=80.06;MQ0=0;MQRankSum=-2.381;QD=39.47;ReadPosRankSum=-0.731;VQSLOD=4.4996;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,108,1709	0/0:5,0:5:15.05:0,15,240	0/0:21,0:21:63.20:0,63,973	0/0:15,0:15:42.14:0,42,650	0/0:12,0:12:36.12:0,36,575	0/0:20,0:20:60.20:0,60,948	0/0:29,0:29:78.27:0,78,1244	1/1:0,26:26:78.25:1067,78,0	0/0:18,0:18:54.18:0,54,863	0/0:21,0:21:63.16:0,63,949	0/0:16,0:16:45.15:0,45,717	0/0:29,0:29:87.30:0,87,1382	0/0:28,0:28:84.27:0,84,1314	0/0:29,0:29:84.29:0,84,1338	0/0:34,0:34:99:0,102,1626	0/0:26,0:26:72.23:0,72,1128	0/0:26,0:26:78.24:0,78,1205	0/0:15,0:15:42.14:0,42,671	1/1:0,30:30:90.30:1257,90,0	1/1:0,26:26:78.26:1091,78,0	1/1:0,34:34:87.29:1216,87,0	0/0:16,0:16:48.15:0,48,744	0/0:10,0:10:30.10:0,30,470	0/0:19,0:19:54.18:0,54,859	0/0:14,0:14:42.14:0,42,670	1/1:1,19:20:60.15:805,60,0	1/1:0,22:22:54.18:753,54,0	1/1:0,19:19:57.19:797,57,0
chr10	41285453	.	G	GTCCCCAGCA	2991.81	PASS	AB=1.000;AC=20;AF=0.357;AN=56;BaseQRankSum=-0.123;DP=583;FS=0.564;HRun=0;HaplotypeScore=159.2395;InbreedingCoeff=0.7519;MQ=75.15;MQ0=6;MQRankSum=-5.677;QD=13.24;ReadPosRankSum=-4.798;VQSLOD=1.1580;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:44.33:0,44,922	0/0:16,0:16:18:0,18,371	0/0:30,0:26:6.84:0,7,92	0/0:21,0:19:5.70:0,6,36	0/0:22,0:22:34.31:0,34,719	0/1:26,0:26:14.44:14,0,899	0/0:28,0:28:50.89:0,51,994	1/1:23,0:22:21.01:191,21,0	0/0:17,0:17:45:0,45,976	0/0:22,0:22:32.96:0,33,497	0/0:14,0:14:17.97:0,18,203	1/1:11,12:26:6.49:272,6,0	0/0:20,0:19:30.08:0,30,706	0/0:17,0:17:32.91:0,33,713	0/0:26,0:26:51.11:0,51,1097	0/0:21,0:21:36.10:0,36,872	0/0:22,0:22:51.03:0,51,1150	0/0:13,0:13:32.98:0,33,668	1/1:14,5:19:15.01:406,15,0	1/1:6,10:16:14.17:304,14,0	1/1:24,0:22:23.75:287,24,0	0/0:18,0:18:39:0,39,757	1/1:10,8:19:8.98:277,9,0	1/1:30,0:29:32.92:522,33,0	0/0:14,0:14:21.04:0,21,513	0/1:15,0:15:54.10:364,0,54	1/1:8,9:19:11.78:421,12,0	1/1:4,3:7:3.01:136,3,0
chr10	41286638	.	CT	C	7173.25	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-4.517;DP=637;FS=2.816;HRun=10;HaplotypeScore=86.6087;InbreedingCoeff=0.9701;MQ=71.53;MQ0=0;MQRankSum=-2.088;QD=21.48;ReadPosRankSum=3.444;VQSLOD=5.6266;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:48.09:0,48,517	0/0:19,0:19:51.12:0,51,552	0/0:16,0:16:26.98:0,27,271	0/0:21,0:21:44.81:0,45,479	1/1:3,26:29:77.97:677,78,0	1/1:2,29:32:56.03:702,56,0	1/1:5,13:18:35.98:313,36,0	0/0:28,0:30:56.97:0,57,597	1/1:2,20:22:50.99:443,51,0	1/1:5,31:36:92.94:801,93,0	1/1:1,22:23:65.98:572,66,0	0/0:3,0:18:26.06:0,26,141	1/1:2,20:22:50.97:443,51,0	1/1:0,18:18:50.99:443,51,0	1/1:1,23:24:65.99:573,66,0	1/1:4,24:28:62.98:547,63,0	1/1:3,34:37:83.96:729,84,0	1/1:1,12:13:2.81:253,3,0	0/0:25,0:25:60.15:0,60,657	0/0:29,1:30:55.14:0,55,815	0/0:28,0:28:68.98:0,69,723	1/1:2,15:17:41.99:365,42,0	0/0:3,0:19:31.28:0,31,160	0/0:1,0:17:20.09:0,20,101	1/1:1,14:15:35.99:313,36,0	0/0:36,0:36:96.26:0,96,1062	0/0:20,0:20:54.11:0,54,578	0/0:4,0:4:12.03:0,12,133
chr10	41286677	.	C	CTG	8662.20	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-17.205;DP=670;FS=0.339;HRun=0;HaplotypeScore=108.4483;InbreedingCoeff=0.9807;MQ=80.21;MQ0=2;MQRankSum=-0.796;QD=47.08;ReadPosRankSum=0.846;VQSLOD=5.9388;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:60.14:0,60,815	0/0:13,0:13:39.09:0,39,516	0/0:27,0:27:63.19:0,63,856	0/0:20,0:20:51.17:0,51,722	0/0:29,0:29:81.27:0,81,1160	0/0:36,0:36:99:0,102,1459	0/0:20,0:20:54.17:0,54,753	1/1:3,26:30:81.26:1452,81,0	0/0:20,0:20:57.19:0,57,817	0/0:35,0:35:99:0,102,1444	0/0:26,0:26:75.25:0,75,1074	0/0:21,0:21:57.18:0,57,799	0/0:26,0:26:72.24:0,72,1029	0/0:21,0:21:60.19:0,60,840	0/0:26,0:26:69.23:0,69,989	0/0:26,0:26:72.23:0,72,1014	0/0:33,0:33:81.27:0,81,1155	0/0:14,0:14:36.10:0,36,497	1/1:5,20:25:63.22:1135,63,0	1/1:2,28:30:78.27:1430,78,0	1/1:4,31:33:87.30:1595,87,0	0/0:20,0:20:57.19:0,57,817	0/0:21,0:21:39.08:0,39,556	0/0:17,0:17:39.13:0,39,558	0/0:14,0:14:36.10:0,36,481	1/1:3,34:37:62.34:1785,62,0	1/1:0,25:24:63.22:1154,63,0	1/1:0,2:2:6.02:110,6,0
chr10	41287630	.	T	TTCAGGTGACAGAGGCAGAAA	32171.24	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-0.998;DP=648;FS=14.426;HRun=0;HaplotypeScore=291.0550;InbreedingCoeff=0.9922;MQ=86.83;MQ0=0;MQRankSum=-15.456;QD=138.67;ReadPosRankSum=-1.926;VQSLOD=3.2507;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:38:99:0,111,4534	0/0:4,0:4:12.04:0,12,668	0/0:28,0:28:72.16:0,72,2780	0/0:23,0:23:45.82:0,46,1416	0/0:22,0:22:54.14:0,54,2271	0/0:25,0:25:75.24:0,75,3191	0/0:32,0:32:87.21:0,87,3711	1/1:27,0:27:75.24:4671,75,0	0/0:27,0:27:78.26:0,78,3995	0/0:16,0:16:48.14:0,48,1886	0/0:18,0:18:51.14:0,51,2407	1/1:6,7:22:33.11:2922,33,0	0/0:20,0:20:60.19:0,60,2712	0/0:23,0:23:66.18:0,66,2992	0/0:29,0:29:87.27:0,87,3935	0/0:33,0:33:96.32:0,96,4924	0/0:29,0:29:87.28:0,87,4220	0/0:16,0:16:45.14:0,45,2154	1/1:14,2:24:57.20:3104,57,0	1/1:10,11:33:63.22:4693,63,0	1/1:7,1:16:15.05:526,15,0	0/0:19,0:19:54.17:0,54,2711	1/1:5,7:18:32.55:2349,33,0	1/1:5,4:19:21.07:1755,21,0	0/0:13,0:13:39.12:0,39,1946	1/1:8,6:27:69.22:4552,69,0	1/1:12,14:37:75.26:6537,75,0	1/1:9,0:9:27.06:1062,27,0
chr10	41288482	.	G	GTCCACC	2700.25	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-5.086;DP=627;FS=0.743;HRun=0;HaplotypeScore=125.5911;InbreedingCoeff=0.9993;MQ=65.31;MQ0=3;MQRankSum=-8.091;QD=61.37;ReadPosRankSum=-0.410;VQSLOD=3.8817;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,99,2451	0/0:10,0:10:30.10:0,30,737	0/0:25,0:19:57.15:0,57,1287	0/0:26,0:20:54.18:0,54,1300	0/0:14,0:14:42.14:0,42,1013	1/1:4,9:23:33.11:1137,33,0	1/1:2,14:21:45.15:1684,45,0	0/0:30,0:30:81.28:0,81,2069	0/0:15,0:15:45.14:0,45,1070	0/0:22,0:22:66.23:0,66,1606	0/0:14,0:14:42.14:0,42,1018	0/0:25,0:25:75.26:0,75,1894	0/0:18,0:18:54.19:0,54,1376	0/0:22,0:22:66.21:0,66,1621	0/0:26,0:26:78.27:0,78,1910	0/0:29,0:29:87.30:0,87,2167	0/0:33,0:32:99:0,99,2504	0/0:33,0:33:96.33:0,96,2427	0/0:25,0:24:72.25:0,72,1789	0/0:25,0:25:72.25:0,72,1824	0/0:16,0:16:48.15:0,48,1136	0/0:12,0:12:36.11:0,36,842	0/0:17,0:17:48.16:0,48,1202	0/0:28,0:28:84.23:0,84,2014	0/0:13,0:13:33.11:0,33,845	0/0:24,0:24:72.25:0,72,1748	0/0:24,0:24:72.25:0,72,1833	0/0:23,0:23:66.12:0,66,1495
chr10	41288984	.	GT	G	4681.36	PASS	AB=0.937;AC=49;AF=0.875;AN=56;BaseQRankSum=4.194;DP=466;FS=0.000;HRun=1;HaplotypeScore=82.5773;InbreedingCoeff=0.1616;MQ=63.34;MQ0=0;MQRankSum=-2.403;QD=10.29;ReadPosRankSum=7.770;VQSLOD=2.3023;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:20,1:21:22.69:218,23,0	1/1:6,0:6:13.77:63,14,0	0/0:11,0:10:5.50:0,5,177	0/1:10,4:14:2.40:131,0,2	1/1:13,1:14:10.99:151,11,0	1/1:20,1:21:31.81:239,32,0	1/1:20,0:20:46.37:206,46,0	0/1:28,0:28:16.59:144,0,17	1/1:20,0:20:49.06:217,49,0	1/1:13,0:13:32.32:161,32,0	1/1:14,0:14:26.62:139,27,0	1/1:18,0:18:46.31:205,46,0	1/1:21,2:23:60.34:305,60,0	1/1:23,1:24:55.49:293,55,0	1/1:18,0:18:40.46:170,40,0	1/1:12,1:13:10.57:130,11,0	0/1:19,0:19:0.42:165,0,0	1/1:11,0:11:18.85:79,19,0	0/1:14,0:14:18.41:75,0,18	1/1:14,1:15:16.51:161,17,0	1/1:15,0:15:40.18:165,40,0	1/1:10,0:9:19.16:87,19,0	0/1:9,1:9:23.70:115,0,24	1/1:19,0:18:51.58:220,52,0	1/1:23,0:22:52.37:248,52,0	1/1:14,0:14:32.81:133,33,0	1/1:17,0:17:43.42:185,43,0	1/1:21,0:21:51.34:275,51,0
chr10	41289237	.	TTCTC	T	3438.36	PASS	AB=0.890;AC=33;AF=0.589;AN=56;BaseQRankSum=2.526;DP=498;FS=5.775;HRun=0;HaplotypeScore=102.7089;InbreedingCoeff=-0.1068;MQ=48.85;MQ0=17;MQRankSum=-2.081;QD=9.42;ReadPosRankSum=0.147;VQSLOD=1.9720;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:26:41.55:0,42,964	0/0:10,0:10:12.04:0,12,298	0/0:28,0:6:5.23:0,5,61	0/0:69,0:14:8.73:0,9,76	1/1:7,6:12:16.21:176,16,0	1/1:11,10:18:23.40:333,23,0	0/1:12,5:13:67.03:110,0,67	0/1:39,0:34:27.58:28,0,106	0/1:8,6:14:27.20:249,0,27	1/1:14,3:16:26.82:381,27,0	0/1:11,2:12:25.71:89,0,26	0/1:15,0:13:70.22:139,0,70	1/1:12,4:16:23.97:334,24,0	1/1:11,7:18:9.03:151,9,0	0/1:12,0:12:18.18:179,0,18	0/1:6,2:9:12.05:88,0,12	0/1:8,1:9:25.61:64,0,26	0/1:8,0:8:83.74:123,0,84	0/1:13,0:11:14.90:15,0,18	1/1:14,0:13:7.66:178,8,0	1/1:15,0:12:2.62:6,3,0	0/1:13,4:15:0.63:119,0,1	1/1:7,1:6:1.24:3,1,0	0/1:8,2:9:4.37:51,0,4	1/1:14,2:14:23.82:396,24,0	0/1:21,1:20:0.54:146,0,1	0/1:11,0:12:18.29:18,0,50	0/1:9,0:11:21.27:63,0,21
chr10	41289245	.	C	CTCTCT	2360.92	PASS	AB=0.966;AC=12;AF=0.214;AN=56;BaseQRankSum=0.734;DP=455;FS=14.318;HRun=0;HaplotypeScore=131.7317;InbreedingCoeff=0.2280;MQ=38.81;MQ0=23;MQRankSum=-4.686;QD=14.57;ReadPosRankSum=1.040;VQSLOD=2.5503;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:22:43.03:0,43,824	0/0:5,0:5:12.04:0,12,249	0/0:16,0:5:0.43:0,0,46	0/0:52,0:7:8.39:0,8,108	0/0:16,0:15:20.78:0,21,216	0/0:24,0:20:31.37:0,31,302	0/1:19,0:15:6.38:6,0,166	0/1:38,0:26:99:137,0,374	0/0:12,0:12:29.98:0,30,304	0/0:14,0:11:15.95:0,16,160	0/0:13,0:12:3.29:0,3,132	0/0:10,0:10:20.03:0,20,179	0/1:13,0:12:21.20:21,0,160	0/0:18,0:18:12.03:0,12,137	0/0:9,0:9:15.11:0,15,193	0/0:9,0:9:14.99:0,15,154	0/0:11,0:10:11.83:0,12,120	0/0:9,0:8:2.85:0,3,179	1/1:8,0:5:9.03:164,9,0	1/1:11,3:12:23.86:400,24,0	1/1:16,0:13:7.93:98,8,0	0/0:15,0:11:18.41:0,18,206	0/0:10,0:7:2.25:0,2,32	0/0:11,0:9:8.14:0,8,61	0/0:15,0:14:13.23:0,13,186	0/1:21,0:19:50.24:645,0,50	0/1:16,2:18:40.72:308,0,41	0/1:11,1:12:7.82:737,0,8
chr10	41289271	.	T	TTCTC	4938.36	PASS	AB=0.924;AC=32;AF=0.615;AN=52;BaseQRankSum=3.838;DP=420;FS=0.577;HRun=0;HaplotypeScore=120.5542;InbreedingCoeff=-0.0701;MQ=32.10;MQ0=30;MQRankSum=-2.470;QD=14.74;ReadPosRankSum=-0.593;VQSLOD=4.3963;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:20:47.97:0,48,732	0/0:3,0:3:9.03:0,9,143	./.	./.	1/1:9,3:12:22.26:363,22,0	0/1:21,0:19:34.87:35,0,268	0/0:18,0:12:17.73:0,18,257	0/1:43,0:29:99:379,0,508	1/1:9,1:9:9.03:150,9,0	0/1:21,0:16:99:390,0,110	0/1:13,0:12:20.02:141,0,20	1/1:8,0:7:6.39:43,6,0	1/1:6,1:6:12.04:272,12,0	1/1:6,1:8:6.86:99,7,0	1/1:8,0:9:12.31:160,12,0	0/1:8,0:8:3.55:90,0,4	0/0:9,0:8:8.94:0,9,94	1/1:7,0:5:11.15:92,11,0	0/1:13,1:8:99:210,0,115	0/1:15,1:16:99:512,0,106	0/1:14,1:14:58.54:59,0,208	1/1:14,1:9:3.32:200,3,0	1/1:14,0:10:7.08:34,7,0	1/1:8,0:5:2.68:11,3,0	0/1:21,0:19:52.65:258,0,53	0/1:14,8:22:99:901,0,135	0/1:13,0:13:87.97:126,0,88	0/1:11,0:12:99:415,0,116
chr10	41289304	.	TTC	T	1017.81	PASS	AB=0.926;AC=27;AF=0.519;AN=52;BaseQRankSum=2.503;DP=439;FS=4.037;HRun=0;HaplotypeScore=125.3966;InbreedingCoeff=0.0769;MQ=34.57;MQ0=36;MQRankSum=-6.412;QD=3.74;ReadPosRankSum=2.523;VQSLOD=2.3011;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:15:29.27:0,29,393	0/0:9,0:9:15.34:0,15,238	./.	./.	0/1:9,6:10:13.21:13,0,61	0/0:23,0:21:49.09:0,49,469	0/0:17,0:11:17.87:0,18,155	0/0:48,0:40:7.62:0,8,35	1/1:5,4:7:8.92:75,9,0	1/1:22,3:21:2.29:303,2,0	1/1:11,3:10:2.91:20,3,0	0/1:5,1:5:1.24:1,0,47	1/1:3,4:5:14.99:150,15,0	1/1:3,3:4:2.71:21,3,0	0/1:7,2:8:17.63:125,0,18	1/1:8,2:8:11.97:127,12,0	0/1:10,0:9:14.23:24,0,14	0/1:10,2:6:31.82:127,0,32	0/1:16,0:13:15.23:15,0,59	0/1:16,1:16:15.91:44,0,16	0/1:19,0:15:9.54:10,0,55	1/1:10,7:12:1.84:18,2,0	0/0:18,0:15:15.33:0,15,278	0/0:15,0:10:9.03:0,9,112	1/1:17,2:17:5.78:48,6,0	0/1:28,0:27:32.06:32,0,70	0/1:11,0:11:1.90:2,0,58	0/1:16,0:15:7.78:27,0,8
chr10	41289315	.	TCTTCTC	T	1028.23	PASS	AB=0.984;AC=24;AF=0.462;AN=52;BaseQRankSum=2.477;DP=428;FS=2.994;HRun=0;HaplotypeScore=131.6935;InbreedingCoeff=0.1189;MQ=35.54;MQ0=44;MQRankSum=-5.064;QD=3.77;ReadPosRankSum=1.822;VQSLOD=2.5884;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:15:29.27:0,29,516	0/0:7,0:7:21.05:0,21,278	./.	./.	0/1:13,0:10:10.85:11,0,61	0/0:24,0:22:49.84:0,50,500	0/0:17,0:11:17.86:0,18,153	0/1:39,0:29:3.73:4,0,26	1/1:8,0:5:8.94:75,9,0	1/1:13,0:17:4.29:311,4,0	1/1:10,0:7:2.86:20,3,0	0/0:7,0:6:2.04:0,2,47	1/1:11,0:9:14.99:175,15,0	1/1:7,0:5:2.51:20,3,0	0/1:8,0:8:17.65:151,0,18	1/1:9,0:7:12.47:128,12,0	0/0:11,0:9:12.06:0,12,93	0/1:13,0:7:15.52:111,0,16	0/1:19,0:14:9.18:9,0,219	0/1:18,0:17:22.85:42,0,23	0/1:17,0:14:0.56:1,0,181	0/1:15,0:12:9.06:9,0,58	0/0:25,0:21:17.63:0,18,275	0/0:17,0:12:8.76:0,9,92	1/1:8,10:17:5.34:81,5,0	0/1:30,0:29:24.16:24,0,163	0/0:13,0:12:0.44:0,0,194	0/1:12,0:10:11.34:17,0,11
chr10	41289317	.	TTCTCTCTC	T	262.35	PASS	AB=0.960;AC=9;AF=0.205;AN=44;BaseQRankSum=1.661;DP=462;FS=1.346;HRun=0;HaplotypeScore=147.1854;InbreedingCoeff=0.1930;MQ=35.26;MQ0=47;MQRankSum=-0.532;QD=2.24;ReadPosRankSum=0.167;VQSLOD=2.5244;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:16:12.04:0,12,351	0/0:9,0:9:6:0,6,67	./.	./.	0/0:18,0:15:9.03:0,9,113	0/0:23,0:21:18.06:0,18,378	./.	0/0:44,0:33:6.98:0,7,34	./.	0/1:25,0:19:4.99:195,0,5	0/1:11,0:7:0:0,0,0	./.	1/1:12,0:10:3:29,3,0	0/0:8,0:6:0:0,0,1	0/1:9,0:8:20.26:41,0,20	0/1:10,0:9:14.12:14,0,24	0/0:11,0:10:10.16:0,10,83	0/0:13,0:8:11.51:0,12,122	0/0:23,0:18:20.35:0,20,363	0/0:18,0:17:2.50:0,2,9	0/0:15,0:12:9.03:0,9,244	0/0:16,0:12:6:0,6,52	0/1:21,7:24:30.23:44,0,30	1/1:16,4:14:2.95:53,3,0	0/0:19,0:18:2.60:0,3,11	0/0:31,0:29:22.08:0,22,264	0/0:15,0:13:9.03:0,9,232	./.
chr10	41290027	.	AAT	A	8951.89	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=17.637;DP=558;FS=8.350;HRun=0;HaplotypeScore=85.5221;InbreedingCoeff=0.9952;MQ=79.62;MQ0=0;MQRankSum=-4.487;QD=42.23;ReadPosRankSum=2.971;VQSLOD=6.6719;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:87.30:0,87,1736	0/0:9,0:9:27.09:0,27,548	0/0:24,0:24:72.24:0,72,1381	0/0:15,0:15:45.13:0,45,812	1/1:0,27:27:66.14:1008,66,0	0/0:21,0:21:60.20:0,60,1183	0/0:26,0:26:78.27:0,78,1556	0/0:30,0:30:90.30:0,90,1795	1/1:0,25:25:69.15:1092,69,0	1/1:0,21:21:63.21:1017,63,0	1/1:0,14:14:38.92:556,39,0	0/0:26,0:26:78.27:0,78,1585	1/1:0,15:15:42.14:683,42,0	1/1:0,21:21:57.19:927,57,0	1/1:0,15:15:42.14:684,42,0	1/1:0,19:19:51.17:830,51,0	1/1:0,15:15:24.08:391,24,0	1/1:1,11:12:33.01:480,33,0	0/0:12,0:12:36.11:0,36,659	0/0:25,0:25:72.25:0,72,1429	0/0:22,0:22:66.23:0,66,1341	1/1:0,17:17:48.06:747,48,0	0/0:21,0:21:60.21:0,60,1192	0/0:29,0:29:84.29:0,84,1706	1/1:0,11:11:33.11:538,33,0	0/0:23,0:23:69.24:0,69,1402	0/0:30,0:30:90.30:0,90,1793	0/0:4,0:4:12.04:0,12,241
chr10	41291451	.	AAG	A	1752.69	PASS	AB=0.939;AC=22;AF=0.393;AN=56;BaseQRankSum=0.322;DP=512;FS=2.017;HRun=0;HaplotypeScore=106.9096;InbreedingCoeff=0.4147;MQ=61.73;MQ0=15;MQRankSum=-1.013;QD=6.26;ReadPosRankSum=-5.296;VQSLOD=1.7866;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:21:33.01:0,33,449	0/0:7,0:6:15.05:0,15,238	0/1:38,0:15:1.19:1,0,130	0/1:49,1:18:21.63:22,0,145	0/0:24,0:24:1:0,1,14	0/0:24,1:25:42.76:0,43,609	0/0:11,0:9:18.06:0,18,281	1/1:12,24:36:69.15:811,69,0	0/1:15,0:16:3.95:4,0,28	0/0:24,0:23:0.22:0,0,24	1/1:6,0:19:2.05:15,2,0	0/0:10,0:10:15.19:0,15,196	1/1:14,0:14:2.22:16,2,0	0/0:15,0:14:8.36:0,8,81	0/0:18,0:18:8.37:0,8,18	0/1:9,0:9:32.39:32,0,38	0/0:9,0:9:3:0,3,25	0/1:10,0:11:0.80:1,0,41	1/1:4,9:13:24.55:297,25,0	1/1:4,7:11:3.01:35,3,0	1/1:15,0:14:18.06:228,18,0	0/0:17,0:16:11.79:0,12,50	0/0:9,0:9:17.95:0,18,272	0/0:21,0:21:33.11:0,33,510	0/0:19,0:17:11.27:0,11,26	1/1:17,1:17:29.37:342,29,0	1/1:12,2:14:8.85:95,9,0	0/1:7,8:15:15.96:29,0,16
chr10	41291462	.	AGT	A	2940.99	PASS	AB=0.988;AC=43;AF=0.768;AN=56;BaseQRankSum=9.149;DP=460;FS=3.923;HRun=0;HaplotypeScore=100.8419;InbreedingCoeff=0.3612;MQ=56.65;MQ0=18;MQRankSum=1.686;QD=7.45;ReadPosRankSum=-0.480;VQSLOD=2.9837;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:20:46.38:46,0,174	0/1:8,0:7:0.01:0,0,124	0/0:24,0:5:8.48:0,8,73	0/1:42,0:13:17.02:17,0,61	1/1:21,0:21:41.73:338,42,0	0/0:18,0:18:15.78:0,16,271	0/1:10,1:9:2.01:2,0,123	1/1:31,0:31:1.62:237,2,0	1/1:14,0:14:36.04:259,36,0	1/1:4,20:23:36.60:365,37,0	1/1:15,0:15:9:89,9,0	0/1:12,0:12:0.51:1,0,96	1/1:3,11:13:8.97:81,9,0	1/1:12,0:10:2.71:111,3,0	1/1:15,0:15:32.77:243,33,0	1/1:2,8:10:5.61:81,6,0	1/1:1,7:8:0.89:2,1,0	1/1:13,0:12:11.85:197,12,0	0/1:14,0:14:12.94:113,0,13	1/1:9,0:9:5.92:43,6,0	1/1:16,0:15:19.87:113,20,0	1/1:13,0:12:29.68:217,30,0	0/1:11,0:11:4.29:4,0,112	0/0:18,5:23:16:0,16,240	1/1:18,0:16:35.86:278,36,0	1/1:16,0:14:15.96:157,16,0	1/1:2,13:15:8.65:55,9,0	1/1:11,0:11:8.81:55,9,0
chr10	41294951	.	AT	A	4393.53	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=0.098;DP=485;FS=2.305;HRun=12;HaplotypeScore=76.6330;InbreedingCoeff=0.9533;MQ=75.90;MQ0=2;MQRankSum=-1.756;QD=11.78;ReadPosRankSum=3.628;VQSLOD=4.9551;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,1:36:69.93:0,70,878	0/0:3,0:3:5.98:0,6,51	0/0:18,0:17:20.24:0,20,143	0/0:11,0:9:14.20:0,14,109	1/1:5,16:21:17.34:318,17,0	1/1:3,0:23:32.59:96,33,0	1/1:4,0:15:20.36:60,20,0	1/1:6,0:34:53.41:155,53,0	1/1:4,19:23:47.80:371,48,0	1/1:2,9:11:29.87:229,30,0	1/1:1,13:14:35.76:271,36,0	0/0:7,0:21:53.86:0,54,276	1/1:1,20:21:56.78:441,57,0	1/1:1,13:14:32.87:255,33,0	1/1:3,17:20:11.40:272,11,0	1/1:3,18:21:11.40:272,11,0	1/1:2,21:23:53.79:418,54,0	1/1:3,14:18:40.87:308,41,0	1/1:4,0:19:30.55:89,31,0	1/1:1,0:14:26.48:78,26,0	1/1:4,0:16:22.40:66,22,0	1/1:0,5:5:14.94:116,15,0	0/0:2,0:10:19.89:0,20,100	0/0:3,0:12:20.36:0,20,102	1/1:3,16:19:44.82:348,45,0	1/1:3,1:18:29.25:100,29,0	1/1:0,0:15:26.48:78,26,0	1/1:0,0:9:18.33:54,18,0
chr10	41295201	.	GTTA	G	2075.21	PASS	AB=0.896;AC=16;AF=0.286;AN=56;BaseQRankSum=-0.401;DP=294;FS=22.709;HRun=0;HaplotypeScore=52.4811;InbreedingCoeff=0.6303;MQ=63.79;MQ0=1;MQRankSum=1.260;QD=19.95;ReadPosRankSum=0.675;VQSLOD=1.2217;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:45.15:0,45,903	0/0:9,0:9:27.08:0,27,515	0/0:3,0:3:5.48:0,5,31	0/1:5,0:2:0.76:1,0,40	0/0:13,0:13:36.59:0,37,465	0/0:18,0:18:45.11:0,45,832	0/0:5,0:5:15.05:0,15,301	1/1:6,19:25:57.04:678,57,0	0/0:8,0:8:24.06:0,24,292	0/0:12,0:12:4.21:0,4,319	0/0:12,0:12:14.14:0,14,398	0/0:9,0:9:27.09:0,27,555	0/1:6,0:6:5.91:6,0,181	0/0:6,0:6:18.06:0,18,229	0/0:14,0:14:36.12:0,36,459	0/0:6,0:6:18.06:0,18,229	0/0:22,0:22:30.18:0,30,630	0/1:15,0:15:0.84:1,0,411	1/1:5,8:11:21.05:294,21,0	1/1:1,8:9:24.08:351,24,0	1/1:3,3:6:9.03:127,9,0	0/0:3,0:3:9.03:0,9,115	0/0:5,0:5:12.03:0,12,214	0/0:14,0:14:39.13:0,39,781	0/0:15,0:15:45.13:0,45,550	0/1:2,5:7:17.12:207,0,17	1/1:1,14:15:36.12:542,36,0	1/1:0,3:3:3.01:45,3,0
chr10	41297069	.	TCTC	T	619.28	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.631;DP=496;FS=3.637;HRun=0;HaplotypeScore=67.0173;InbreedingCoeff=0.9657;MQ=76.43;MQ0=0;MQRankSum=-3.014;QD=44.23;ReadPosRankSum=0.176;VQSLOD=5.0911;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:0,14:14:42.14:714,42,0	0/0:8,0:8:24.06:0,24,500	0/0:8,0:8:24.08:0,24,466	0/0:12,0:12:16.69:0,17,584	0/0:23,0:23:69.24:0,69,1567	0/0:17,0:17:51.18:0,51,1141	0/0:11,0:11:30.10:0,30,664	0/0:27,0:27:81.28:0,81,1840	0/0:14,0:14:42.13:0,42,898	0/0:23,0:23:69.24:0,69,1576	0/0:15,0:15:45.15:0,45,1038	0/0:17,0:17:51.18:0,51,1176	0/0:16,0:16:48.16:0,48,1104	0/0:23,0:23:69.24:0,69,1565	0/0:20,0:20:57.18:0,57,1270	0/0:27,0:27:81.28:0,81,1868	0/0:25,0:25:72.19:0,72,1550	0/0:18,0:18:51.18:0,51,1170	0/0:25,0:25:72.24:0,72,1599	0/0:8,0:8:21.07:0,21,422	0/0:13,0:13:39.13:0,39,900	0/0:14,0:14:39.13:0,39,897	0/0:17,0:17:48.16:0,48,1106	0/0:26,0:25:78.25:0,78,1751	0/0:22,0:22:66.23:0,66,1499	0/0:22,0:22:66.23:0,66,1522	0/0:26,0:26:78.27:0,78,1797	0/0:5,0:5:15.05:0,15,346
chr10	41298495	.	T	TA	1811.52	PASS	AB=0.771;AC=10;AF=0.179;AN=56;BaseQRankSum=-8.878;DP=494;FS=5.526;HRun=11;HaplotypeScore=54.2552;InbreedingCoeff=0.7396;MQ=68.77;MQ0=3;MQRankSum=-1.615;QD=17.25;ReadPosRankSum=0.188;VQSLOD=4.6014;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:33:64.72:0,65,490	0/1:9,1:11:7.51:8,0,122	0/0:28,0:13:14.51:0,15,98	0/0:25,0:18:18.84:0,19,115	0/0:17,1:18:14.34:0,14,288	0/0:18,0:18:50.76:0,51,387	0/0:4,0:4:8.95:0,9,67	0/0:25,0:24:61.54:0,62,465	0/0:15,0:15:35.83:0,36,279	1/1:4,21:25:57.06:559,57,0	1/1:3,12:15:13.65:282,14,0	0/0:0,0:9:16.30:0,16,47	0/0:16,0:16:47.82:0,48,371	0/0:10,0:10:26.90:0,27,209	0/1:4,6:10:11.21:79,0,11	0/0:17,0:19:45.91:0,46,337	0/0:20,1:21:26.34:0,26,387	1/1:1,29:31:74.98:745,75,0	0/0:18,1:19:19.63:0,20,319	0/0:26,0:28:72.77:0,73,539	0/0:18,0:18:18.62:0,19,279	0/0:14,0:14:37.11:0,37,281	0/0:1,0:10:18.33:0,18,53	0/0:0,0:5:10.19:0,10,29	1/1:1,12:13:30.06:304,30,0	0/0:17,0:17:44.82:0,45,347	0/0:16,0:16:38.84:0,39,300	0/0:19,0:19:21.48:0,21,360
chr10	41299093	.	T	TTTTG	15060.95	PASS	AB=0.854;AC=37;AF=0.661;AN=56;BaseQRankSum=-1.274;DP=607;FS=1.918;HRun=0;HaplotypeScore=132.9929;InbreedingCoeff=0.8787;MQ=64.70;MQ0=1;MQRankSum=-3.814;QD=36.38;ReadPosRankSum=0.269;VQSLOD=4.8929;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:51.77:0,52,856	0/0:7,0:7:15.04:0,15,221	0/0:25,0:21:18.06:0,18,291	0/0:8,0:6:6.02:0,6,97	1/1:9,10:21:39.13:846,39,0	0/0:24,0:24:45.01:0,45,692	0/0:21,0:21:39.13:0,39,626	0/1:34,6:41:10.67:513,0,11	1/1:2,9:12:27.09:646,27,0	1/1:9,19:28:60.21:1442,60,0	1/1:6,7:13:21.07:505,21,0	0/0:21,0:21:45.15:0,45,727	1/1:10,5:16:24.08:530,24,0	1/1:9,13:22:39.13:926,39,0	1/1:15,11:26:51.12:1008,51,0	1/1:13,20:33:72.22:1563,72,0	1/1:11,8:19:27.56:650,28,0	1/1:9,9:18:27.09:635,27,0	1/1:14,5:19:27.08:555,27,0	1/1:15,10:25:39.12:840,39,0	1/1:11,6:17:18.06:434,18,0	1/1:11,18:29:48.16:1093,48,0	0/0:24,0:24:54.17:0,54,849	0/0:29,0:29:63.15:0,63,956	1/1:4,15:19:48.16:1063,48,0	1/1:10,10:20:33.11:755,33,0	1/1:12,9:21:36.12:810,36,0	1/1:11,3:14:3.24:248,3,0
chr10	41299136	.	GA	G	1533.08	PASS	AB=0.950;AC=8;AF=0.143;AN=56;BaseQRankSum=-8.106;DP=617;FS=0.000;HRun=10;HaplotypeScore=144.5728;InbreedingCoeff=0.7578;MQ=64.97;MQ0=0;MQRankSum=2.325;QD=15.80;ReadPosRankSum=3.871;VQSLOD=2.5304;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:72.18:0,72,787	0/0:10,0:10:30.08:0,30,330	0/1:17,0:15:2.09:2,0,176	0/1:8,1:7:12.75:13,0,106	0/0:27,1:28:51.84:0,52,781	0/0:5,0:23:57.32:0,57,339	0/0:3,0:31:72.72:0,73,366	0/0:33,0:33:66.17:0,66,722	0/0:15,0:15:33.09:0,33,365	0/0:28,0:28:60.16:0,60,664	0/0:18,0:19:44.95:0,45,479	1/1:1,23:24:59.97:521,60,0	0/0:17,0:17:45.07:0,45,475	0/0:17,0:17:36.09:0,36,392	0/0:26,0:26:72.19:0,72,796	0/0:35,1:36:70.21:0,70,997	0/0:17,0:17:39.11:0,39,431	0/0:21,0:21:45.12:0,45,498	0/0:22,0:23:63:0,63,678	0/0:23,1:24:40.04:0,40,644	0/0:12,0:12:30.08:0,30,330	0/0:25,0:25:63.17:0,63,697	1/1:2,18:20:53.98:469,54,0	1/1:0,27:27:77.98:677,78,0	0/0:27,0:26:72.16:0,72,784	0/0:18,1:19:25.09:0,25,505	0/0:29,0:29:81.18:0,81,877	0/0:8,0:8:18.05:0,18,199
chr10	41299227	.	GGT	G	1706.39	PASS	AB=0.848;AC=23;AF=0.442;AN=52;BaseQRankSum=0.175;DP=589;FS=10.892;HRun=0;HaplotypeScore=148.5675;InbreedingCoeff=0.6763;MQ=56.07;MQ0=16;MQRankSum=2.340;QD=6.56;ReadPosRankSum=4.369;VQSLOD=2.8034;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:30:27:0,27,270	0/1:9,1:10:15.01:15,0,174	./.	./.	0/1:17,0:31:0:0,0,0	0/0:17,0:23:31.72:0,32,228	0/0:26,0:25:11.62:0,12,99	0/0:32,0:31:24.91:0,25,162	1/1:16,6:21:23.33:188,23,0	1/1:20,0:23:14.52:94,15,0	1/1:13,12:25:31.60:306,32,0	0/0:12,0:14:29.87:0,30,262	1/1:17,5:21:15.04:164,15,0	1/1:3,0:12:11.36:56,11,0	1/1:14,4:19:26.73:250,27,0	1/1:10,0:17:22.86:119,23,0	0/0:21,0:21:0.47:0,0,1	1/1:15,11:26:29.89:299,30,0	0/0:2,0:18:17.80:0,18,130	0/0:15,0:16:14.76:0,15,103	0/0:18,0:18:2.59:0,3,24	1/1:10,11:23:26.75:264,27,0	0/1:12,1:18:10.11:27,0,10	0/0:12,0:19:3:0,3,26	1/1:5,5:11:11.87:113,12,0	0/0:26,0:27:1.47:0,1,233	0/0:4,0:26:15.87:0,16,123	0/0:0,0:11:6:0,6,52
chr10	41299860	.	CT	C	5117.67	PASS	AB=0.763;AC=32;AF=0.571;AN=56;BaseQRankSum=-8.150;DP=446;FS=4.545;HRun=11;HaplotypeScore=63.9759;InbreedingCoeff=0.8224;MQ=69.48;MQ0=0;MQRankSum=0.068;QD=17.12;ReadPosRankSum=0.896;VQSLOD=5.8953;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,26:30:62.89:517,63,0	0/0:6,0:6:9.02:0,9,96	0/0:25,0:18:22.52:0,23,282	0/1:18,0:12:0.32:0,0,86	0/0:25,0:25:12.96:0,13,96	0/0:3,0:18:42.78:0,43,231	0/0:1,0:4:8.56:0,9,43	1/1:3,10:14:31.99:252,32,0	1/1:3,14:17:38.94:320,39,0	1/1:3,14:18:43.98:351,44,0	1/1:2,21:23:53.91:443,54,0	0/0:9,1:10:2.39:0,2,207	1/1:5,11:16:29.95:246,30,0	0/0:10,0:11:6.98:0,7,30	1/1:1,8:10:23.01:178,23,0	0/0:9,0:9:5.73:0,6,30	0/0:25,0:26:17.78:0,18,84	1/1:4,23:27:68.90:565,69,0	1/1:3,16:19:44.88:366,45,0	1/1:1,17:18:47.93:394,48,0	1/1:0,3:3:8.99:74,9,0	1/1:0,4:4:11.99:99,12,0	0/0:9,0:9:18.03:0,18,178	0/0:4,0:4:9.02:0,9,96	1/1:8,19:27:44.92:369,45,0	1/1:5,16:21:47.92:394,48,0	1/1:6,17:24:46.94:375,47,0	0/1:1,8:10:0.63:174,0,1
chr10	41299876	.	A	ATG	2582.63	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=7.110;DP=487;FS=1.611;HRun=0;HaplotypeScore=95.1154;InbreedingCoeff=0.8255;MQ=66.77;MQ0=0;MQRankSum=-1.434;QD=25.57;ReadPosRankSum=-0.008;VQSLOD=4.2874;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:73.58:0,74,915	0/0:3,0:3:9.03:0,9,116	0/0:26,0:18:24.04:0,24,423	0/1:20,0:14:11.27:11,0,144	1/1:20,6:26:30.50:825,31,0	0/0:16,0:16:39.13:0,39,499	0/0:9,0:9:27.04:0,27,303	0/0:19,0:19:4.47:0,4,437	0/0:22,0:22:54.11:0,54,636	0/0:24,0:24:51.15:0,51,634	0/0:22,0:22:63.16:0,63,764	0/0:10,0:10:21.05:0,21,256	0/0:12,0:12:30.08:0,30,369	1/1:10,4:14:33.08:459,33,0	0/0:15,0:15:38.78:0,39,459	1/1:12,3:15:45.09:617,45,0	1/1:22,4:26:30.52:834,31,0	0/0:27,0:27:72.12:0,72,869	0/0:18,0:18:48.12:0,48,567	0/0:20,0:20:51.11:0,51,599	0/0:8,0:8:23.98:0,24,245	0/0:12,0:12:33.11:0,33,423	0/0:11,0:11:27.06:0,27,316	0/0:6,0:6:15.02:0,15,163	0/0:22,0:22:51.14:0,51,629	0/0:22,0:22:63.19:0,63,787	0/0:21,0:21:53.95:0,54,678	0/0:10,0:10:30.10:0,30,386
chr10	41301325	.	G	GTTTT	7194.61	PASS	AB=0.740;AC=36;AF=0.643;AN=56;BaseQRankSum=-2.798;DP=705;FS=7.317;HRun=14;HaplotypeScore=150.1540;InbreedingCoeff=0.4996;MQ=63.37;MQ0=0;MQRankSum=-3.780;QD=12.92;ReadPosRankSum=-5.980;VQSLOD=-0.0797;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:57:28.11:0,28,872	0/0:8,0:9:17.88:0,18,205	0/1:30,0:20:9.69:10,0,180	0/1:12,0:10:2.07:2,0,37	1/1:12,1:34:31.49:612,31,0	0/0:2,0:14:29.83:0,30,231	0/0:4,0:26:56.66:0,57,438	0/1:10,0:21:41.98:44,0,42	1/1:27,0:26:37.74:486,38,0	1/1:12,10:23:49.93:852,50,0	1/1:16,14:35:62.25:869,62,0	1/1:10,11:25:24.03:434,24,0	1/1:26,0:26:20.34:321,20,0	1/1:12,0:26:17.79:148,18,0	1/1:17,7:28:29.93:459,30,0	1/1:8,0:24:27:332,27,0	1/1:7,0:25:38.53:339,39,0	1/1:8,1:22:16.26:226,16,0	0/0:14,0:23:0.74:0,1,140	0/1:9,0:27:29.34:29,0,106	0/0:4,0:16:8.39:0,8,21	1/1:23,0:25:29.17:398,29,0	1/1:16,10:31:34.27:458,34,0	1/1:4,11:21:32.49:573,32,0	1/1:10,3:25:37.64:484,38,0	0/1:9,0:28:69.57:95,0,70	0/1:10,0:36:21.24:21,0,77	0/0:1,0:3:5.48:0,5,29
chr10	41301337	.	T	TTTTTT	8535.14	PASS	AB=1.000;AC=34;AF=0.607;AN=56;BaseQRankSum=0.733;DP=710;FS=1.266;HRun=11;HaplotypeScore=176.2397;InbreedingCoeff=0.6342;MQ=68.04;MQ0=0;MQRankSum=-5.131;QD=17.10;ReadPosRankSum=-6.271;VQSLOD=-0.2020;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:35.77:0,36,1031	0/0:7,0:7:17.96:0,18,237	0/0:32,0:23:4.40:0,4,220	0/0:15,0:14:6.96:0,7,58	1/1:30,0:30:26.19:558,26,0	0/0:15,0:15:29.81:0,30,285	0/0:23,0:23:56.97:0,57,541	0/1:17,0:17:51.44:51,0,79	1/1:31,0:30:50.86:1040,51,0	1/1:23,0:22:39.59:671,40,0	1/1:37,0:36:80.72:1273,81,0	1/1:24,0:24:32.42:462,32,0	1/1:21,5:28:39.07:850,39,0	1/1:22,0:22:23.35:213,23,0	1/1:30,0:30:32.44:431,32,0	1/1:26,0:24:35.76:410,36,0	1/1:26,0:26:36.79:265,37,0	1/1:20,0:20:17.93:203,18,0	0/1:26,0:26:21.18:21,0,188	0/1:32,0:32:17.63:18,0,148	0/0:15,0:15:17.04:0,17,60	1/1:22,0:21:27.08:586,27,0	1/1:29,0:29:34.60:456,35,0	1/1:21,0:21:32:445,32,0	1/1:24,0:24:41.09:513,41,0	0/1:30,0:30:67.63:68,0,125	0/0:43,0:43:8.92:0,9,154	0/0:5,0:5:5.14:0,5,37
chr10	41304336	.	TTGTG	T	1681.38	PASS	AB=0.809;AC=22;AF=0.440;AN=50;BaseQRankSum=-1.201;DP=607;FS=8.027;HRun=0;HaplotypeScore=122.2041;InbreedingCoeff=0.5458;MQ=43.79;MQ0=18;MQRankSum=0.008;QD=7.15;ReadPosRankSum=3.142;VQSLOD=1.9318;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:49:7.93:0,8,144	0/0:11,0:12:15.04:0,15,264	./.	./.	0/0:17,0:18:8.99:0,9,148	1/1:13,0:13:0.51:31,1,0	0/1:19,0:22:19.04:22,0,19	./.	1/1:10,1:12:3.92:13,4,0	0/1:18,3:18:3.79:201,0,4	0/1:11,3:14:0.90:48,0,1	1/1:9,6:15:17.39:246,17,0	1/1:13,2:15:19.83:249,20,0	0/0:18,0:19:8.62:0,9,68	1/1:14,10:24:1.38:288,1,0	0/0:9,0:20:11.81:0,12,180	0/0:25,0:26:15.60:0,16,136	1/1:14,3:17:21.01:264,21,0	0/0:16,0:14:8.86:0,9,92	0/0:17,0:17:1.40:0,1,68	0/0:40,0:37:3.45:0,3,23	1/1:12,2:14:8.86:109,9,0	0/1:8,3:11:0:0,0,0	1/1:24,6:30:18.02:237,18,0	1/1:10,0:17:19.17:139,19,0	0/0:31,0:25:17.59:0,18,166	0/0:13,0:14:12.51:0,13,146	0/0:5,0:5:0:0,0,0
chr10	41304400	.	AAG	A	7227.99	PASS	AB=0.652;AC=47;AF=0.839;AN=56;BaseQRankSum=5.431;DP=485;FS=2.366;HRun=0;HaplotypeScore=125.8322;InbreedingCoeff=0.8018;MQ=58.79;MQ0=13;MQRankSum=-2.508;QD=19.43;ReadPosRankSum=4.823;VQSLOD=4.7771;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:42.12:0,42,642	0/0:8,0:8:21.07:0,21,333	0/0:46,1:17:20.68:0,21,286	0/0:36,0:21:22.38:0,22,448	1/1:4,13:17:26.96:329,27,0	1/1:2,7:9:20.99:226,21,0	1/1:8,10:17:27.08:335,27,0	1/1:8,11:16:33.09:388,33,0	1/1:1,13:12:30.02:338,30,0	0/1:7,8:15:14.17:304,0,14	1/1:3,12:15:15:169,15,0	1/1:6,13:19:29.90:328,30,0	1/1:5,8:14:29.93:348,30,0	1/1:4,13:16:32.79:356,33,0	1/1:8,12:20:36.02:412,36,0	1/1:8,8:15:26.98:299,27,0	1/1:5,15:19:33.04:387,33,0	1/1:3,9:12:21.07:258,21,0	1/1:5,10:12:33.05:390,33,0	1/1:5,5:10:8.73:111,9,0	1/1:6,17:22:32.85:408,33,0	1/1:5,6:11:13.34:183,13,0	1/1:6,12:18:30.02:338,30,0	1/1:6,18:22:20.72:260,21,0	1/1:7,9:15:18.04:223,18,0	1/1:5,10:14:30.08:360,30,0	1/1:2,10:12:36.11:442,36,0	1/1:2,1:2:2.99:36,3,0
chr10	41304431	.	AGGAGAG	A	661.36	PASS	AB=1.000;AC=9;AF=0.173;AN=52;BaseQRankSum=-1.957;DP=507;FS=1.007;HRun=0;HaplotypeScore=151.4642;InbreedingCoeff=0.4300;MQ=65.43;MQ0=37;MQRankSum=-4.031;QD=4.66;ReadPosRankSum=-1.700;VQSLOD=2.2283;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:18:39.13:0,39,1081	0/0:7,0:7:9.02:0,9,190	0/1:52,0:28:0:0,0,0	0/0:59,0:31:5.71:0,6,82	0/0:16,0:16:6.01:0,6,61	1/1:9,6:14:24.02:373,24,0	1/1:21,3:19:26.79:372,27,0	0/0:19,0:18:8.90:0,9,61	0/0:17,0:14:5.92:0,6,39	0/0:18,0:16:13.18:0,13,96	1/1:10,0:10:0.47:1,0,0	0/0:16,0:14:7.15:0,7,45	0/0:14,0:12:8.92:0,9,67	0/0:16,0:13:12.33:0,12,83	./.	0/1:17,0:16:34.47:34,0,51	0/0:18,0:17:5.82:0,6,36	0/0:11,0:10:4.20:0,4,22	0/0:21,0:12:6.44:0,6,48	0/0:8,0:8:0:0,0,0	0/0:22,0:22:8.73:0,9,70	0/0:16,0:16:0.89:0,1,2	0/0:13,0:13:8.96:0,9,79	0/1:22,0:19:0.01:0,0,1	0/0:9,0:8:8.93:0,9,120	0/0:15,0:11:7.25:0,7,56	0/0:14,0:12:3.46:0,3,24	./.
chr10	41304468	.	GA	G	540.44	PASS	AB=0.927;AC=21;AF=0.375;AN=56;BaseQRankSum=1.629;DP=288;FS=2.352;HRun=2;HaplotypeScore=72.8437;InbreedingCoeff=-0.1261;MQ=61.21;MQ0=9;MQRankSum=-0.776;QD=4.39;ReadPosRankSum=-3.310;VQSLOD=-0.5973;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:21:60.12:0,60,832	0/0:12,0:12:33.11:0,33,492	0/0:29,0:13:31.15:0,31,308	0/0:37,0:11:23.12:0,23,242	0/1:2,0:2:19.34:30,0,19	0/0:21,0:20:33.53:0,34,553	0/0:22,0:20:45:0,45,586	0/0:2,0:2:2.88:0,3,15	0/0:3,0:3:8.88:0,9,63	0/1:11,0:11:16.69:17,0,115	0/1:10,0:10:10.28:10,0,58	0/1:9,1:9:28.77:29,0,44	0/0:9,0:9:14.60:0,15,105	0/1:2,1:3:12.07:33,0,12	0/1:8,0:7:25.54:48,0,26	0/1:4,2:5:0.82:54,0,1	0/1:8,0:8:8.37:8,0,13	0/1:7,0:6:31.03:31,0,32	0/1:4,2:5:18.27:82,0,18	0/1:8,0:8:17.45:55,0,17	1/1:12,1:12:11.21:79,11,0	0/1:4,2:6:31.24:95,0,31	0/1:6,0:6:15.05:15,0,33	0/0:8,0:8:18.57:0,19,104	0/1:7,0:7:2.11:2,0,105	1/1:5,1:6:7.77:79,8,0	0/1:5,0:3:10.61:29,0,11	1/1:1,0:1:2.22:7,2,0
chr10	41305611	.	C	CA	2355.34	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-8.692;DP=679;FS=0.510;HRun=2;HaplotypeScore=69.9122;InbreedingCoeff=0.9990;MQ=81.83;MQ0=0;MQRankSum=-1.262;QD=35.69;ReadPosRankSum=1.653;VQSLOD=4.1467;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,150,1914	0/0:10,0:10:27.09:0,27,350	0/0:31,0:31:78.07:0,78,971	0/0:21,0:21:60.19:0,60,762	0/0:23,0:23:60.18:0,60,764	0/0:18,0:18:51.17:0,51,661	0/0:23,0:22:61.53:0,62,799	0/0:40,0:40:99:0,120,1528	0/0:33,0:33:99:0,99,1281	0/0:17,0:17:48.14:0,48,600	0/0:10,0:10:30.10:0,30,387	1/1:0,19:19:51.17:758,51,0	0/0:25,0:25:75.23:0,75,951	0/0:29,0:29:81.22:0,81,1018	0/0:29,0:29:87.28:0,87,1127	0/0:21,0:21:63.19:0,63,802	0/0:25,0:25:71.38:0,71,930	0/0:13,0:13:39.13:0,39,506	0/0:22,0:22:57.14:0,57,705	0/0:22,0:22:63.20:0,63,815	0/0:41,0:41:99:0,120,1556	0/0:18,0:18:54.16:0,54,685	1/1:0,16:16:39.33:585,39,0	1/1:0,31:31:78.26:1156,78,0	0/0:26,0:26:69.21:0,69,881	0/0:30,0:30:87.28:0,87,1127	0/0:25,0:25:75.24:0,75,972	0/0:9,0:9:27.09:0,27,350
chr10	41307197	.	T	TC	20711.97	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-8.496;DP=656;FS=13.000;HRun=1;HaplotypeScore=66.2486;InbreedingCoeff=0.9966;MQ=89.06;MQ0=0;MQRankSum=-6.625;QD=40.85;ReadPosRankSum=2.384;VQSLOD=4.3818;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,108,1400	0/0:10,0:10:30.10:0,30,390	0/0:22,0:22:54.15:0,54,666	0/0:25,0:25:66.08:0,66,791	1/1:0,22:22:63.21:944,63,0	0/0:23,0:23:66.21:0,66,857	0/0:30,0:30:84.27:0,84,1089	1/1:4,24:28:75.19:1053,75,0	1/1:0,24:24:63.21:944,63,0	1/1:0,21:21:63.19:921,63,0	1/1:0,16:16:48.16:719,48,0	1/1:0,28:28:72.24:1079,72,0	1/1:2,19:21:54.18:807,54,0	1/1:2,26:28:75.25:1124,75,0	1/1:0,34:34:99:1484,99,0	1/1:0,27:26:75.25:1124,75,0	1/1:1,27:28:75.25:1124,75,0	1/1:0,15:15:45.15:675,45,0	1/1:0,13:13:39.13:583,39,0	1/1:0,26:26:75.25:1124,75,0	1/1:0,42:42:99:1754,117,0	1/1:0,15:15:42.14:629,42,0	1/1:1,13:14:39.13:584,39,0	1/1:1,31:32:72.24:1079,72,0	1/1:0,26:26:69.23:1034,69,0	1/1:0,18:18:54.18:810,54,0	1/1:4,20:24:60.20:893,60,0	1/1:0,5:5:15.05:225,15,0
chr10	41309094	.	TGAGAGAGAGAGAGAGAGAGAGAGA	T	1845.89	PASS	AB=0.776;AC=11;AF=0.212;AN=52;BaseQRankSum=5.858;DP=581;FS=31.826;HRun=0;HaplotypeScore=323.5451;InbreedingCoeff=0.5141;MQ=60.76;MQ0=18;MQRankSum=-2.281;QD=10.92;ReadPosRankSum=-0.641;VQSLOD=0.6334;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:29:33.11:0,33,2344	0/0:16,0:16:21.07:0,21,1592	./.	0/0:45,0:18:0.64:0,1,70	0/0:17,0:17:3.01:0,3,119	0/1:24,0:26:99:194,0,290	0/0:18,0:18:17.97:0,18,260	1/1:41,0:41:3.01:47,3,0	0/0:12,0:15:12.04:0,12,832	0/0:21,0:21:36.12:0,36,2907	0/0:17,0:17:15.05:0,15,774	0/0:24,0:24:30.10:0,30,2355	0/0:18,0:18:21.96:0,22,1605	0/0:15,0:15:12.03:0,12,542	0/0:24,0:24:23.66:0,24,1337	0/0:11,0:11:9.03:0,9,562	0/0:9,0:9:18.06:0,18,733	0/0:8,0:8:18.06:0,18,1638	1/1:18,2:20:8.70:236,9,0	1/1:24,8:32:9.03:562,9,0	./.	0/0:21,0:21:30.10:0,30,2611	0/0:18,0:18:30.09:0,30,2376	0/0:19,0:22:36.59:0,37,2442	0/0:16,0:15:15.04:0,15,1132	0/1:18,6:23:99:396,0,304	1/1:16,4:20:6.02:375,6,0	0/1:2,4:6:0.52:182,0,1
chr10	41310270	.	GA	G	9988.47	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=1.096;DP=593;FS=13.945;HRun=10;HaplotypeScore=70.7776;InbreedingCoeff=0.9862;MQ=63.95;MQ0=11;MQRankSum=-2.757;QD=19.21;ReadPosRankSum=2.409;VQSLOD=4.6805;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:35:89.81:0,90,959	0/0:7,0:6:12.03:0,12,132	0/0:13,0:10:26.13:0,26,241	0/0:14,0:11:18.88:0,19,211	1/1:5,24:29:71.88:623,72,0	1/1:2,13:15:26.99:234,27,0	1/1:2,17:19:38.99:339,39,0	1/1:7,28:34:83.96:728,84,0	1/1:5,24:28:59.98:520,60,0	1/1:4,24:28:71.98:625,72,0	1/1:1,20:20:44.97:390,45,0	1/1:4,13:16:38.99:339,39,0	1/1:2,11:13:32.99:286,33,0	1/1:3,17:20:47.99:416,48,0	1/1:5,14:18:32.98:286,33,0	1/1:3,15:18:41.98:365,42,0	1/1:7,23:28:27.63:529,28,0	1/1:8,12:20:27.91:301,28,0	1/1:4,21:23:59.95:514,60,0	1/1:2,28:30:80.97:701,81,0	1/1:3,11:12:26.99:234,27,0	1/1:3,20:23:52.80:447,53,0	1/1:5,15:19:32.97:287,33,0	1/1:0,14:14:29.99:260,30,0	1/1:6,11:17:20.73:182,21,0	1/1:3,27:30:80.98:702,81,0	1/1:2,20:21:47.99:417,48,0	1/1:1,11:12:29.99:260,30,0
chr10	41311712	.	C	CTT	28358.06	PASS	AB=0.538;AC=47;AF=0.839;AN=56;BaseQRankSum=1.216;DP=740;FS=12.909;HRun=1;HaplotypeScore=188.1896;InbreedingCoeff=0.8966;MQ=57.66;MQ0=7;MQRankSum=-3.674;QD=47.34;ReadPosRankSum=1.882;VQSLOD=3.0264;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:35:89.37:0,89,1347	0/0:17,0:17:51.17:0,51,774	0/0:34,0:17:19.51:0,20,307	0/0:53,0:22:45.96:0,46,691	1/1:7,15:22:63.22:1156,63,0	1/1:2,17:19:45.15:840,45,0	1/1:3,20:23:51.13:927,51,0	1/1:2,32:34:97.56:1749,98,0	1/1:3,24:27:63.07:1120,63,0	1/1:3,28:30:90.17:1612,90,0	1/1:6,20:26:74.95:1203,75,0	1/1:3,18:20:51.17:941,51,0	1/1:8,23:31:87.16:1526,87,0	1/1:3,20:23:62.91:1202,63,0	1/1:3,17:20:53.48:1052,53,0	1/1:5,18:23:50.84:928,51,0	1/1:8,16:23:69.21:1203,69,0	1/1:3,10:13:32.51:668,33,0	1/1:1,17:18:51.14:874,51,0	1/1:9,24:33:99:1753,99,0	0/1:2,12:14:4.73:281,0,5	1/1:1,22:23:69.15:1211,69,0	1/1:7,21:29:74.04:1374,74,0	1/1:5,12:15:26.43:551,26,0	1/1:6,37:41:99:1941,105,0	1/1:11,26:37:99:1886,105,0	1/1:9,26:34:93.31:1732,93,0	1/1:2,10:13:33.11:628,33,0
chr10	41311734	.	TTTCC	T	11168.85	PASS	AB=0.952;AC=42;AF=0.750;AN=56;BaseQRankSum=6.783;DP=679;FS=6.619;HRun=0;HaplotypeScore=263.6848;InbreedingCoeff=0.7657;MQ=50.61;MQ0=12;MQRankSum=-4.831;QD=22.84;ReadPosRankSum=1.709;VQSLOD=3.8898;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:38:91.75:0,92,1988	0/0:16,0:16:48.14:0,48,1038	0/0:36,0:13:8.99:0,9,138	0/0:47,0:12:8.65:0,9,116	0/0:28,1:28:28.53:0,29,631	1/1:14,2:16:36.08:401,36,0	1/1:19,3:22:47.91:525,48,0	1/1:27,0:25:38.93:354,39,0	1/1:20,1:21:50.62:637,51,0	1/1:29,1:26:53.82:717,54,0	1/1:22,0:21:51.03:648,51,0	1/1:18,2:19:44.83:535,45,0	1/1:29,2:29:66.13:820,66,0	0/0:21,0:21:33.02:0,33,342	1/1:12,3:15:39.03:460,39,0	0/1:20,1:21:28.63:29,0,351	0/1:18,1:17:43.72:44,0,180	1/1:8,1:9:17.72:186,18,0	1/1:15,0:12:26.85:262,27,0	1/1:27,4:31:84.07:860,84,0	1/1:8,0:8:6.01:62,6,0	1/1:11,2:12:30.07:373,30,0	1/1:30,2:30:69.10:879,69,0	1/1:12,1:12:26.60:264,27,0	1/1:34,6:37:87.07:990,87,0	1/1:37,1:38:95.78:999,96,0	1/1:24,6:29:80.89:856,81,0	1/1:15,1:14:24.05:269,24,0
chr10	41311753	.	TC	T	5736.93	PASS	AB=0.743;AC=21;AF=0.375;AN=56;BaseQRankSum=10.758;DP=648;FS=0.344;HRun=1;HaplotypeScore=248.6792;InbreedingCoeff=0.7418;MQ=39.47;MQ0=10;MQRankSum=-8.658;QD=21.09;ReadPosRankSum=3.324;VQSLOD=4.5620;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:32:79.62:0,80,1222	0/0:21,0:21:54.95:0,55,753	0/0:28,0:6:15.05:0,15,223	0/1:38,2:7:21.15:21,0,136	0/0:35,0:34:84.25:0,84,1120	0/0:14,0:14:39.77:0,40,297	0/0:19,0:19:51.85:0,52,380	0/0:20,0:18:29:0,29,410	1/1:2,16:18:51.15:629,51,0	1/1:2,22:20:48.13:619,48,0	1/1:2,19:20:42.45:575,42,0	1/1:5,15:19:25.94:506,26,0	1/1:6,23:27:49.90:650,50,0	0/0:18,0:17:36.05:0,36,513	1/1:4,11:15:11.35:405,11,0	0/0:26,0:26:59.78:0,60,878	0/0:20,0:17:42.14:0,42,591	0/1:6,5:11:99:173,0,101	0/0:13,0:11:29.07:0,29,272	0/0:34,0:34:90.58:0,91,667	0/0:8,0:8:14.51:0,15,145	1/1:7,10:15:1.22:295,1,0	1/1:6,21:26:51:696,51,0	0/1:3,7:9:6.28:229,0,6	1/1:10,29:36:54.61:940,55,0	0/0:42,1:43:77.15:0,77,876	0/0:32,0:31:87.53:0,88,579	0/0:12,0:11:25.63:0,26,155
chr10	41311755	.	TTTC	T	13502.82	PASS	AB=0.944;AC=42;AF=0.750;AN=56;BaseQRankSum=4.625;DP=656;FS=13.747;HRun=0;HaplotypeScore=239.5942;InbreedingCoeff=0.4413;MQ=39.04;MQ0=11;MQRankSum=-3.258;QD=25.67;ReadPosRankSum=-0.694;VQSLOD=3.4754;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:32:70.06:0,70,1728	0/0:21,0:21:51.64:0,52,1005	0/0:31,0:6:15.04:0,15,239	0/0:45,0:7:7.75:0,8,166	0/1:36,0:35:99:123,0,618	1/1:6,8:14:38.56:496,39,0	1/1:8,11:19:44.22:624,44,0	1/1:13,8:19:45.86:483,46,0	1/1:18,0:18:47.68:616,48,0	1/1:23,0:19:47.83:691,48,0	1/1:19,2:20:50.84:732,51,0	1/1:17,2:18:45.72:592,46,0	1/1:26,3:27:60.66:868,61,0	0/1:18,0:17:68.84:69,0,337	1/1:14,1:15:37.73:459,38,0	0/1:26,0:26:48.61:49,0,553	0/1:20,0:17:3.97:4,0,306	0/1:12,0:12:32.24:214,0,32	1/1:9,5:12:25.97:293,26,0	1/1:12,20:32:83.31:1175,83,0	0/1:4,4:8:28.15:109,0,28	1/1:14,3:15:31.82:426,32,0	1/1:24,4:26:65.50:939,66,0	1/1:10,0:9:20.16:215,20,0	1/1:37,2:36:81.64:975,82,0	1/1:12,31:43:99:1682,127,0	1/1:12,20:32:86.79:1280,87,0	1/1:5,7:11:27.02:387,27,0
chr10	41311758	.	CTT	C	5366.11	PASS	AB=0.972;AC=31;AF=0.554;AN=56;BaseQRankSum=11.323;DP=635;FS=6.970;HRun=5;HaplotypeScore=248.6416;InbreedingCoeff=0.3685;MQ=38.11;MQ0=14;MQRankSum=-8.474;QD=13.02;ReadPosRankSum=7.850;VQSLOD=-0.2374;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:79.15:0,79,1404	0/0:20,0:20:51.61:0,52,821	0/0:33,0:6:15.04:0,15,228	0/0:41,0:6:14.16:0,14,200	0/0:4,0:35:82.56:0,83,702	0/1:11,0:14:38.92:39,0,73	0/1:16,0:18:13.19:64,0,13	0/1:12,0:17:14.73:15,0,146	1/1:3,14:17:39.11:455,39,0	1/1:2,21:19:45.13:530,45,0	1/1:5,16:20:47.51:505,48,0	1/1:4,13:16:37.97:413,38,0	1/1:6,22:26:47.25:599,47,0	0/0:2,0:17:42.39:0,42,350	1/1:5,9:14:29.72:311,30,0	0/0:8,0:24:31.65:0,32,365	0/0:11,0:16:34.64:0,35,273	0/1:8,4:12:8.22:148,0,8	0/1:8,0:10:15.21:15,0,59	0/1:21,0:28:78.84:113,0,79	0/1:7,0:8:24.95:42,0,25	1/1:6,10:14:32.68:326,33,0	1/1:11,20:29:43.72:613,44,0	1/1:5,5:9:15.04:170,15,0	1/1:12,24:33:62.61:676,63,0	0/1:35,0:44:99:144,0,167	0/1:26,0:31:6.47:136,0,6	1/1:10,0:10:13.41:52,13,0
chr10	41311760	.	TTTTC	T	4262.25	PASS	AB=0.990;AC=24;AF=0.429;AN=56;BaseQRankSum=11.237;DP=634;FS=2.141;HRun=0;HaplotypeScore=271.1335;InbreedingCoeff=0.7040;MQ=37.80;MQ0=13;MQRankSum=-7.511;QD=14.02;ReadPosRankSum=1.070;VQSLOD=4.1255;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:70.42:0,70,1835	0/0:20,0:20:42.61:0,43,969	0/0:33,0:6:9.03:0,9,215	0/1:40,0:6:0.73:1,0,173	0/0:35,0:34:59.95:0,60,1019	0/0:14,0:14:34.98:0,35,316	0/0:19,0:19:23.81:0,24,311	0/0:21,0:18:46.87:0,47,496	1/1:17,0:17:38.34:374,38,0	1/1:22,1:19:34.94:322,35,0	1/1:21,0:20:38.42:441,38,0	1/1:18,0:17:30.73:337,31,0	1/1:26,0:25:54.84:561,55,0	0/0:22,0:21:50.73:0,51,537	1/1:12,1:13:29.96:308,30,0	0/1:23,1:24:60.55:61,0,515	0/1:19,0:17:19.22:19,0,397	0/1:14,0:14:30.62:170,0,31	0/0:10,0:9:17.78:0,18,185	0/0:30,0:30:70:0,70,560	0/0:7,0:8:14.57:0,15,102	1/1:15,0:13:22.36:251,22,0	1/1:29,2:29:75.67:793,76,0	1/1:8,0:8:12.48:112,12,0	1/1:30,1:28:46.88:513,47,0	0/0:43,0:43:97.13:0,97,913	0/0:34,0:33:44.17:0,44,437	0/0:11,0:10:3.68:0,4,87
chr10	41311761	.	TTTCTTTTC	T	9811.97	PASS	AB=0.978;AC=26;AF=0.464;AN=56;BaseQRankSum=8.141;DP=620;FS=0.721;HRun=0;HaplotypeScore=283.7850;InbreedingCoeff=0.5606;MQ=37.88;MQ0=12;MQRankSum=-8.601;QD=31.96;ReadPosRankSum=-1.244;VQSLOD=3.8686;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:84.24:0,84,2306	0/0:20,0:20:42.57:0,43,1193	0/0:31,0:6:9.03:0,9,266	0/0:40,0:6:4.99:0,5,260	0/0:35,0:34:35.17:0,35,878	0/0:14,0:14:32.33:0,32,375	0/0:18,0:18:23.13:0,23,582	0/0:21,0:18:28.43:0,28,329	1/1:15,0:15:42.14:872,42,0	1/1:24,0:20:48.16:962,48,0	1/1:20,0:19:48.14:982,48,0	1/1:16,0:15:39.12:727,39,0	1/1:27,0:25:62.09:1083,62,0	0/0:22,0:21:21.17:0,21,443	1/1:13,0:13:36.12:768,36,0	0/1:22,0:22:63.11:63,0,441	0/1:21,0:18:38.72:39,0,452	0/1:11,2:13:3.06:465,0,3	0/1:11,0:10:33.41:33,0,226	0/0:31,0:31:22:0,22,724	0/0:8,0:8:11.81:0,12,102	1/1:13,2:13:33.03:650,33,0	1/1:30,0:28:77.08:1435,77,0	1/1:7,0:6:15.05:283,15,0	1/1:27,1:25:63.10:1235,63,0	0/0:43,0:43:23.05:0,23,1156	0/1:34,0:33:99:180,0,844	0/1:11,0:10:34.07:34,0,241
chr10	41311767	.	TTC	T	382.24	PASS	AB=0.937;AC=10;AF=0.179;AN=56;BaseQRankSum=-2.534;DP=623;FS=3.406;HRun=0;HaplotypeScore=257.0035;InbreedingCoeff=-0.2142;MQ=36.89;MQ0=11;MQRankSum=-4.529;QD=1.77;ReadPosRankSum=-6.110;VQSLOD=0.9499;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:26:74.99:0,75,1339	0/0:17,0:17:42.61:0,43,751	0/0:24,0:3:9.03:0,9,166	0/0:37,0:6:6.51:0,7,195	0/0:36,0:35:93.30:0,93,1518	0/0:12,0:12:36.12:0,36,575	0/0:18,0:18:47.95:0,48,742	0/0:26,0:23:60.73:0,61,861	0/1:15,1:16:31.18:31,0,107	0/1:25,0:21:4.47:4,0,114	0/1:18,2:19:6.70:7,0,110	0/0:15,1:15:12.76:0,13,112	0/0:27,0:25:16.32:0,16,215	0/0:22,0:21:57.12:0,57,860	0/1:16,0:16:56.33:80,0,56	0/0:22,0:22:49.45:0,49,856	0/0:19,0:17:40.05:0,40,675	0/1:9,6:15:43.87:89,0,44	0/1:13,1:13:22.06:22,0,396	0/0:33,1:34:37.12:0,37,1147	0/0:8,0:8:11.10:0,11,157	0/1:15,0:13:37.96:38,0,58	0/1:31,0:29:63.76:64,0,127	0/0:10,0:9:15.37:0,15,68	0/1:31,0:28:4.89:5,0,157	0/0:42,0:41:99:0,113,1881	0/1:28,5:32:99:179,0,1028	0/0:9,0:8:9.39:0,9,278
chr10	41311776	.	TC	T	4971.54	PASS	AB=0.754;AC=20;AF=0.357;AN=56;BaseQRankSum=10.918;DP=643;FS=3.587;HRun=2;HaplotypeScore=229.9726;InbreedingCoeff=0.6186;MQ=39.37;MQ0=11;MQRankSum=-8.071;QD=19.65;ReadPosRankSum=-0.057;VQSLOD=4.4261;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,2:26:67.60:0,68,919	0/0:17,0:17:48.28:0,48,597	0/0:19,0:3:9:0,9,99	0/0:34,0:6:2.36:0,2,117	0/0:40,0:39:99:0,102,1416	0/1:16,0:16:9.98:10,0,473	0/0:19,0:18:48.13:0,48,684	0/0:20,0:18:51.06:0,51,701	0/1:7,13:20:99:431,0,114	1/1:9,17:22:1.06:438,1,0	1/1:5,16:20:18.99:500,19,0	1/1:3,12:14:31.84:383,32,0	1/1:6,24:28:61.94:779,62,0	0/0:24,0:23:59.25:0,59,636	1/1:9,10:19:22.68:368,23,0	0/0:19,0:19:43.99:0,44,662	0/0:23,1:22:50.10:0,50,776	0/1:15,4:19:99:172,0,260	0/0:13,0:13:33.83:0,34,424	0/0:37,0:37:26.82:0,27,981	0/0:8,0:8:14.93:0,15,162	0/1:4,10:12:64.74:220,0,65	1/1:7,24:29:73.42:830,73,0	1/1:7,5:11:19.31:205,19,0	1/1:11,19:27:53.43:637,53,0	0/0:45,0:44:72.53:0,73,1639	0/0:33,0:33:76.18:0,76,1102	0/0:9,0:9:20.66:0,21,277
chr10	41311777	.	CCTTTCTTT	C	3015.19	PASS	AB=0.990;AC=21;AF=0.457;AN=46;BaseQRankSum=-5.954;DP=640;FS=4.473;HRun=0;HaplotypeScore=304.3851;InbreedingCoeff=0.4940;MQ=39.61;MQ0=12;MQRankSum=3.009;QD=9.42;ReadPosRankSum=0.947;VQSLOD=2.0888;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:26:2.60:11,3,0	1/1:10,7:17:10.73:204,11,0	./.	./.	0/1:40,0:39:32.92:33,0,361	1/1:16,0:16:24.03:381,24,0	./.	./.	0/0:21,0:21:24.08:0,24,447	0/0:26,0:22:11.21:0,11,57	0/1:22,0:21:2.42:44,0,2	0/0:13,0:12:5.70:0,6,31	0/0:28,0:26:20.75:0,21,237	0/0:22,0:23:37.17:0,37,435	0/1:18,0:19:15.46:15,0,17	0/0:19,0:19:23.96:0,24,479	0/1:24,0:22:94.14:94,0,343	0/0:19,0:19:22.63:0,23,361	1/1:14,0:13:12.04:238,12,0	1/1:25,11:36:47.89:683,48,0	./.	0/1:14,0:12:17.32:17,0,117	0/0:32,0:30:26.98:0,27,357	0/0:11,0:10:11.87:0,12,117	0/0:26,0:23:18.03:0,18,139	1/1:45,0:44:42.90:581,43,0	1/1:34,1:35:39.12:814,39,0	1/1:8,1:9:3.01:73,3,0
chr10	41311785	.	T	TC	4231.60	PASS	AB=0.792;AC=11;AF=0.196;AN=56;BaseQRankSum=-6.901;DP=636;FS=3.999;HRun=1;HaplotypeScore=210.5782;InbreedingCoeff=0.1587;MQ=41.59;MQ0=15;MQRankSum=0.340;QD=16.28;ReadPosRankSum=-1.218;VQSLOD=4.4487;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:29:55.23:0,55,755	0/0:16,0:16:39.32:0,39,446	0/0:13,0:2:6.02:0,6,77	0/0:18,0:2:2.74:0,3,12	1/1:1,38:38:93.16:1322,93,0	0/1:14,2:16:99:133,0,381	0/0:22,0:20:49.34:0,49,577	0/0:22,0:17:51.13:0,51,632	0/0:24,0:24:66.67:0,67,845	0/0:24,0:20:47.74:0,48,506	0/0:21,0:20:17.55:0,18,386	0/0:13,0:12:30.10:0,30,402	0/0:28,0:26:64.65:0,65,773	0/1:12,10:21:87.28:342,0,87	0/0:18,0:18:45.92:0,46,442	0/1:5,14:19:57.31:529,0,57	1/1:6,25:29:32.26:916,32,0	0/0:19,0:19:47.59:0,48,560	0/1:15,4:13:64.57:65,0,309	0/1:33,1:34:99:325,0,695	0/0:8,0:8:11.90:0,12,128	0/0:15,0:13:32.13:0,32,400	0/0:31,0:29:76.74:0,77,959	0/0:11,0:10:24.03:0,24,278	0/0:29,0:26:63.11:0,63,769	0/1:37,5:41:99:134,0,1083	0/1:22,16:38:99:466,0,653	0/0:9,0:9:3.21:0,3,215
chr10	41312558	.	TCTCTCTCTCTCCCC	T	2943.47	PASS	AB=1.000;AC=36;AF=0.692;AN=52;BaseQRankSum=-0.846;DP=537;FS=0.839;HRun=0;HaplotypeScore=159.6471;InbreedingCoeff=0.1826;MQ=39.36;MQ0=48;MQRankSum=-0.846;QD=7.57;ReadPosRankSum=-0.354;VQSLOD=2.7398;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:35:30.23:0,30,815	0/0:6,0:6:6.89:0,7,57	./.	0/0:35,0:5:1.55:0,2,4	1/1:14,0:13:8.67:81,9,0	0/1:19,0:19:2.01:134,0,2	0/1:27,0:24:0.31:18,0,0	0/1:27,0:22:9.99:207,0,10	0/1:20,0:20:65.94:96,0,66	1/1:23,2:22:52.35:1042,52,0	1/1:13,1:14:7.78:79,8,0	0/1:22,0:18:0.17:0,0,0	1/1:13,0:10:10.25:108,10,0	1/1:17,0:15:6.01:88,6,0	./.	1/1:17,0:16:12.48:177,12,0	1/1:19,0:17:22.65:307,23,0	1/1:8,0:6:3.01:90,3,0	1/1:9,0:8:15.62:97,16,0	1/1:13,0:11:0.47:1,0,0	0/1:22,0:19:4.09:13,0,4	1/1:20,0:20:0.94:2,1,0	0/1:16,0:14:18.91:19,0,36	0/0:29,0:26:1.29:0,1,49	1/1:20,1:21:9.92:220,10,0	0/1:18,0:17:68.87:188,0,69	1/1:18,0:17:5.70:45,6,0	1/1:10,0:6:1.89:70,2,0
chr10	41312560	.	TCTCTCTCTCCCC	T	4095.14	PASS	AB=1.000;AC=40;AF=0.769;AN=52;BaseQRankSum=-1.836;DP=532;FS=0.000;HRun=0;HaplotypeScore=148.1703;InbreedingCoeff=0.3830;MQ=36.83;MQ0=50;MQRankSum=-2.093;QD=10.58;ReadPosRankSum=0.068;VQSLOD=1.9231;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:34:25.93:0,26,659	0/0:6,0:6:6.89:0,7,57	./.	0/0:32,0:3:1.55:0,2,4	1/1:12,2:13:8.26:103,8,0	0/1:19,0:19:2:115,0,2	1/1:29,0:26:0.09:18,0,0	1/1:25,0:20:17.15:322,17,0	1/1:20,0:20:10.46:138,10,0	1/1:7,18:22:55.76:1231,56,0	1/1:13,1:14:7.36:78,7,0	1/1:23,0:19:5.19:38,5,0	1/1:13,0:10:19.29:234,19,0	1/1:18,0:16:5.59:87,6,0	./.	1/1:15,2:16:12.48:195,12,0	1/1:17,1:16:23.53:370,24,0	1/1:3,5:6:3.01:108,3,0	1/1:10,0:9:21.28:201,21,0	0/1:15,0:11:0:0,0,0	0/1:21,0:18:3.73:32,0,4	1/1:19,0:19:1.41:3,1,0	0/1:12,0:10:14.46:19,0,14	0/0:27,0:24:1.54:0,2,24	1/1:15,5:20:10.59:258,11,0	1/1:18,1:18:11.20:363,11,0	1/1:18,0:17:5.85:64,6,0	1/1:10,0:6:11.96:117,12,0
chr10	41312564	.	TCTCTCCCC	T	4278.19	PASS	AB=0.986;AC=43;AF=0.796;AN=54;BaseQRankSum=-1.788;DP=515;FS=1.056;HRun=0;HaplotypeScore=130.0632;InbreedingCoeff=0.4347;MQ=35.81;MQ0=50;MQRankSum=-0.543;QD=10.75;ReadPosRankSum=3.416;VQSLOD=3.4967;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:30:25.68:0,26,493	0/0:6,0:6:6.48:0,6,57	0/0:20,0:3:2.87:0,3,15	0/0:31,0:3:1.25:0,1,3	1/1:15,0:14:7.43:102,7,0	0/1:21,0:21:2:112,0,2	1/1:34,0:31:0.11:20,0,0	1/1:21,0:16:33.57:364,34,0	1/1:19,0:19:29.67:373,30,0	1/1:25,0:22:56.04:948,56,0	1/1:14,0:14:6.95:77,7,0	1/1:22,0:18:4.87:53,5,0	1/1:12,0:9:19.88:260,20,0	1/1:17,0:15:5.89:87,6,0	./.	1/1:15,0:14:12.01:161,12,0	1/1:18,0:16:27.51:296,28,0	1/1:7,0:5:3.01:67,3,0	1/1:10,0:9:24.62:274,25,0	0/1:14,0:10:0.02:0,0,0	0/1:20,0:17:3.74:32,0,4	1/1:18,0:18:1.89:2,2,0	1/1:11,0:9:6:51,6,0	1/1:24,0:21:2.76:24,3,0	1/1:18,0:18:9.03:176,9,0	1/1:17,1:17:38.83:568,39,0	1/1:5,11:15:5.85:90,6,0	1/1:8,0:4:12.03:141,12,0
chr10	41312566	.	TCTCCCC	T	4185.40	PASS	AB=0.800;AC=44;AF=0.815;AN=54;BaseQRankSum=-1.708;DP=510;FS=1.059;HRun=0;HaplotypeScore=123.7058;InbreedingCoeff=0.4273;MQ=34.77;MQ0=58;MQRankSum=-0.220;QD=10.81;ReadPosRankSum=3.329;VQSLOD=1.9681;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:32:25.75:0,26,445	0/0:5,0:5:6.48:0,6,56	0/0:24,0:3:2.87:0,3,15	0/0:35,0:1:1.55:0,2,4	1/1:15,0:14:6.96:101,7,0	0/1:23,0:22:3.01:112,0,3	1/1:35,0:32:1.37:22,1,0	1/1:19,0:14:33.65:381,34,0	1/1:17,0:17:29.86:443,30,0	1/1:25,0:22:55.89:828,56,0	1/1:14,0:14:6.95:77,7,0	1/1:22,0:18:4.78:53,5,0	1/1:13,0:10:20.10:262,20,0	1/1:17,0:15:6.05:87,6,0	./.	1/1:15,0:14:12.01:144,12,0	1/1:18,0:16:27.41:263,27,0	1/1:7,0:5:3.01:50,3,0	1/1:9,0:8:22.50:267,23,0	1/1:13,0:9:0.47:1,0,0	0/1:6,12:15:3.72:32,0,4	1/1:2,16:18:0.47:2,0,0	1/1:11,0:8:6.01:75,6,0	1/1:19,1:17:3.22:49,3,0	1/1:18,0:18:9.03:155,9,0	1/1:17,0:16:38.87:569,39,0	1/1:15,0:14:5.23:71,5,0	1/1:8,0:4:12.03:141,12,0
chr10	41312568	.	TCCCC	T	3902.79	PASS	AB=1.000;AC=42;AF=0.778;AN=54;BaseQRankSum=-1.664;DP=498;FS=2.319;HRun=5;HaplotypeScore=116.0411;InbreedingCoeff=0.4286;MQ=34.56;MQ0=57;MQRankSum=0.101;QD=10.32;ReadPosRankSum=3.663;VQSLOD=-0.6492;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:33:26.85:0,27,403	0/0:5,0:5:6.48:0,6,56	0/0:22,0:1:2.88:0,3,15	0/0:36,0:1:1.25:0,1,3	1/1:15,0:14:6.02:100,6,0	0/1:23,0:22:2.73:112,0,3	1/1:34,0:31:2.09:22,2,0	1/1:9,9:13:31.62:376,32,0	1/1:17,0:17:29.66:382,30,0	1/1:25,0:22:55.80:718,56,0	1/1:14,0:14:6.48:76,6,0	1/1:21,0:17:4.95:53,5,0	1/1:13,0:10:23.56:311,24,0	1/1:16,0:14:5.75:87,6,0	./.	1/1:13,0:12:12.01:128,12,0	1/1:15,1:14:23.35:228,23,0	1/1:7,0:5:3.01:35,3,0	1/1:9,0:8:22.13:266,22,0	0/1:14,0:10:0.02:0,0,0	0/1:18,0:15:3.72:32,0,4	0/1:17,0:17:0:1,0,0	1/1:11,0:8:6.01:84,6,0	1/1:19,1:17:3.25:49,3,0	1/1:17,1:18:9.03:137,9,0	1/1:16,0:15:38.86:510,39,0	1/1:15,0:14:5.05:52,5,0	1/1:8,0:4:12.03:142,12,0
chr10	41312589	.	CTGTGTGTGTGTGTG	C	831.45	PASS	AB=0.778;AC=19;AF=0.396;AN=48;BaseQRankSum=6.687;DP=489;FS=2.764;HRun=0;HaplotypeScore=158.8799;InbreedingCoeff=0.2299;MQ=35.99;MQ0=51;MQRankSum=-3.224;QD=5.20;ReadPosRankSum=-1.387;VQSLOD=2.3613;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:34:5.54:0,6,102	0/0:6,0:8:15.05:0,15,685	./.	./.	1/1:7,9:15:2.66:6,3,0	0/0:23,0:21:8.52:0,9,468	0/0:30,0:27:10.93:0,11,586	0/0:20,0:17:18.32:0,18,260	0/0:16,0:16:24.55:0,25,908	0/1:21,0:21:12.27:109,0,12	1/1:6,0:11:1.77:4,2,0	0/1:5,0:12:43.22:93,0,43	0/0:15,0:11:24.08:0,24,828	1/1:10,1:10:0.89:2,1,0	./.	1/1:5,5:9:3.01:115,3,0	1/1:6,8:15:12.04:382,12,0	1/1:5,0:4:3.01:104,3,0	0/1:9,0:9:24.89:25,0,83	1/1:6,0:11:0.47:1,0,0	0/0:21,0:14:2.97:0,3,21	0/0:20,0:20:15.13:0,15,735	./.	0/0:11,0:17:0:0,0,0	0/0:13,7:23:0.87:0,1,2	0/1:11,0:20:84.25:84,0,122	0/0:13,0:15:5.16:0,5,47	0/1:6,0:5:41.81:42,0,63
chr10	41312687	.	CAGCG	C	432.61	PASS	AB=0.883;AC=4;AF=0.071;AN=56;BaseQRankSum=5.753;DP=577;FS=38.513;HRun=0;HaplotypeScore=180.7332;InbreedingCoeff=-0.0777;MQ=74.33;MQ0=0;MQRankSum=-5.738;QD=5.21;ReadPosRankSum=-4.845;VQSLOD=-0.2694;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:41.94:0,42,1037	0/0:12,0:12:36.12:0,36,989	0/0:21,0:20:45.38:0,45,1499	0/0:32,0:31:47.86:0,48,1904	0/0:27,0:26:58.26:0,58,1503	0/0:18,0:18:48.16:0,48,1281	0/0:18,0:17:48.16:0,48,1304	0/0:35,0:35:99:0,102,2751	0/0:14,0:14:10.36:0,10,1013	0/0:32,0:32:96.33:0,96,2753	0/0:28,0:28:78.27:0,78,2224	0/0:14,0:14:36.12:0,36,951	0/0:12,0:12:36.12:0,36,1037	0/0:21,0:21:57.20:0,57,1627	0/0:16,0:16:42.14:0,42,1186	0/1:15,5:20:99:210,0,1128	0/1:12,7:19:99:256,0,698	0/0:13,0:13:36.12:0,36,1040	0/0:16,0:15:45.14:0,45,1240	0/0:27,0:27:30.24:0,30,1878	0/0:14,0:14:12.47:0,12,753	0/0:16,0:16:25.42:0,25,1269	0/1:21,0:21:63.95:64,0,1150	0/1:23,0:23:9.32:9,0,1137	0/0:33,0:33:78.27:0,78,2234	0/0:20,0:20:57.20:0,57,1610	0/0:22,0:22:47.28:0,47,1650	0/0:15,0:15:45.15:0,45,1298
chr10	41312706	.	C	CCTTTCTTT	4771.11	PASS	AB=1.000;AC=45;AF=0.804;AN=56;BaseQRankSum=-1.886;DP=565;FS=34.117;HRun=0;HaplotypeScore=203.2432;InbreedingCoeff=0.3146;MQ=59.50;MQ0=2;MQRankSum=-4.135;QD=9.37;ReadPosRankSum=-5.175;VQSLOD=1.1094;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:10,8:18:11.64:310,12,0	0/0:12,0:12:24.08:0,24,527	0/0:14,0:11:2.96:0,3,19	0/1:22,0:19:0:0,0,0	1/1:35,0:34:12.58:83,13,0	1/1:17,0:17:18.95:623,19,0	1/1:20,0:19:10.94:53,11,0	1/1:26,0:26:6.35:30,6,0	1/1:13,0:13:3.01:81,3,0	0/1:30,0:30:15.31:15,0,537	0/0:30,0:30:4.18:0,4,835	1/1:11,0:11:9.03:317,9,0	1/1:11,0:11:12.46:187,12,0	1/1:24,0:24:8.95:70,9,0	0/1:17,0:17:18.57:19,0,417	1/1:22,0:22:20.46:214,20,0	1/1:19,0:19:24.01:258,24,0	0/1:14,0:14:6.22:6,0,274	1/1:17,0:16:9.43:91,9,0	1/1:26,0:26:21.54:579,22,0	1/1:11,0:11:6.41:43,6,0	1/1:20,0:20:11.05:237,11,0	1/1:23,0:23:11.73:304,12,0	1/1:22,0:22:9.02:233,9,0	0/1:28,0:28:47.30:47,0,730	1/1:23,0:23:15.27:350,15,0	1/1:22,0:22:15.05:518,15,0	1/1:18,0:18:3.01:104,3,0
chr10	41312739	.	C	CTTTCTTTCTTTT	10867.51	PASS	AB=1.000;AC=34;AF=0.607;AN=56;BaseQRankSum=0.868;DP=541;FS=25.866;HRun=0;HaplotypeScore=218.1966;InbreedingCoeff=0.4964;MQ=67.66;MQ0=2;MQRankSum=-8.050;QD=28.75;ReadPosRankSum=1.124;VQSLOD=2.7116;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:23:84.30:84,0,184	0/0:10,0:10:27.07:0,27,741	0/0:19,0:14:13.28:0,13,233	0/0:14,0:12:33.85:0,34,269	1/1:30,0:29:84.14:1297,84,0	1/1:21,0:21:20.75:532,21,0	1/1:15,0:15:4.32:223,4,0	0/1:17,0:17:30.36:30,0,147	1/1:4,0:17:3.01:101,3,0	0/0:25,0:25:56.54:0,57,1116	0/0:29,0:29:73.35:0,73,1720	1/1:5,0:15:21.07:581,21,0	1/1:14,0:14:38.98:459,39,0	1/1:19,0:19:45.11:775,45,0	0/0:24,0:24:49.35:0,49,1043	1/1:26,0:26:78.12:1643,78,0	1/1:17,0:17:47.89:719,48,0	0/0:15,0:15:34.27:0,34,654	0/1:11,0:11:21.18:21,0,93	0/1:20,0:20:7.30:810,0,7	0/1:10,0:10:8.52:9,0,69	1/1:5,16:24:48.20:953,48,0	1/1:7,17:29:36.59:1058,37,0	1/1:5,7:16:9.03:406,9,0	0/0:27,0:27:62.67:0,63,1510	0/1:21,0:21:66.19:378,0,66	1/1:26,0:26:30.10:704,30,0	1/1:6,0:6:3.01:85,3,0
chr10	41312742	.	T	TCTTTCTTTC	6959.19	PASS	AB=0.953;AC=27;AF=0.482;AN=56;BaseQRankSum=-6.440;DP=488;FS=3.685;HRun=0;HaplotypeScore=158.9750;InbreedingCoeff=0.3381;MQ=73.63;MQ0=2;MQRankSum=-3.979;QD=24.00;ReadPosRankSum=-1.528;VQSLOD=4.3392;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:23:60.70:61,0,445	0/0:9,0:9:27.09:0,27,762	0/0:20,0:15:25.31:0,25,379	0/0:16,0:14:35.72:0,36,360	0/0:21,0:21:18.58:0,19,584	1/1:0,16:21:21.07:956,21,0	1/1:0,0:9:21.07:362,21,0	1/1:2,0:19:48.14:731,48,0	0/1:14,0:14:20.84:38,0,21	0/0:26,0:26:71.84:0,72,1313	0/0:28,0:28:84.02:0,84,1844	1/1:10,0:10:8.88:221,9,0	0/1:15,0:15:99:125,0,318	0/0:13,0:13:32.60:0,33,336	0/0:25,0:25:72.04:0,72,1348	0/1:17,0:17:65.47:65,0,347	0/1:16,0:16:6.28:6,0,311	0/0:14,0:14:42.11:0,42,809	1/1:2,0:13:36.10:598,36,0	1/1:0,11:18:47.93:1083,48,0	1/1:1,0:14:27.09:459,27,0	0/1:21,0:21:99:156,0,393	0/1:22,0:22:98.50:219,0,99	0/1:11,0:10:29.28:182,0,29	0/0:26,0:26:74.84:0,75,1588	0/1:4,1:15:10.76:798,0,11	1/1:0,19:23:15.05:748,15,0	1/1:0,8:9:3.01:151,3,0
chr10	41313962	.	CA	C	2482.94	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=10.282;DP=636;FS=0.000;HRun=6;HaplotypeScore=107.2898;InbreedingCoeff=0.9956;MQ=89.27;MQ0=0;MQRankSum=-2.707;QD=26.70;ReadPosRankSum=2.670;VQSLOD=3.2934;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,99,1302	0/0:13,0:13:36.12:0,36,474	0/0:34,0:34:69.25:0,69,994	0/0:14,0:14:15.16:0,15,409	1/1:1,26:27:75.19:806,75,0	0/0:33,0:33:90.25:0,90,1130	0/0:24,0:24:69.21:0,69,893	0/0:32,0:32:87.27:0,87,1132	0/0:18,0:18:54.16:0,54,683	0/0:25,0:25:63.20:0,63,823	0/0:15,0:15:42.13:0,42,537	0/0:23,0:23:69.21:0,69,893	0/0:19,0:19:54.18:0,54,709	1/1:3,21:24:60.15:645,60,0	0/0:21,0:21:60.20:0,60,789	1/1:1,18:19:48.12:516,48,0	1/1:0,23:23:63.16:677,63,0	0/0:13,0:13:39.13:0,39,513	0/0:16,0:16:42.12:0,42,530	0/0:31,0:31:84.20:0,84,1042	0/0:18,0:18:54.12:0,54,653	0/0:24,0:24:63.18:0,63,798	0/0:27,0:27:75.21:0,75,939	0/0:21,0:21:54.18:0,54,710	0/0:22,0:22:60.14:0,60,755	0/0:16,0:16:39.10:0,39,476	0/0:29,0:28:81.03:0,81,1022	0/0:20,0:20:57.19:0,57,750
chr10	41314063	.	T	TATGG	6434.89	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=10.886;DP=643;FS=0.000;HRun=0;HaplotypeScore=111.0606;InbreedingCoeff=0.9995;MQ=84.24;MQ0=0;MQRankSum=-5.018;QD=67.74;ReadPosRankSum=1.015;VQSLOD=6.8416;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:93.32:0,93,1800	0/0:9,0:9:27.09:0,27,523	0/0:23,0:23:57.18:0,57,1065	0/0:21,0:21:60.21:0,60,1144	1/1:4,25:30:63.22:1722,63,0	0/0:27,0:27:81.28:0,81,1566	0/0:30,0:30:90.31:0,90,1744	0/0:39,0:39:99:0,114,2157	0/0:22,0:22:63.20:0,63,1188	0/0:36,0:36:99:0,99,1919	0/0:18,0:18:51.17:0,51,988	0/0:15,0:15:42.14:0,42,806	0/0:20,0:20:60.19:0,60,1130	1/1:4,16:20:57.19:1472,57,0	0/0:19,0:19:57.20:0,57,1096	1/1:4,23:28:72.25:1927,72,0	1/1:1,16:17:48.16:1314,48,0	0/0:20,0:20:55.80:0,56,1064	0/0:13,0:13:39.12:0,39,694	0/0:25,0:25:75.26:0,75,1454	0/0:23,0:23:66.21:0,66,1244	0/0:23,0:23:63.20:0,63,1188	0/0:28,0:28:84.23:0,84,1481	0/0:17,0:17:51.16:0,51,955	0/0:20,0:20:57.20:0,57,1085	0/0:28,0:28:84.29:0,84,1628	0/0:31,0:30:90.31:0,90,1733	0/0:10,0:10:30.09:0,30,545
chr10	41315995	.	T	TTAGATAGA	8759.27	PASS	AB=0.810;AC=43;AF=0.860;AN=50;BaseQRankSum=1.323;DP=642;FS=8.004;HRun=0;HaplotypeScore=197.1384;InbreedingCoeff=0.5567;MQ=68.90;MQ0=12;MQRankSum=-3.887;QD=16.43;ReadPosRankSum=-0.111;VQSLOD=2.9730;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:25,5:31:11.91:417,12,0	0/0:14,0:14:15.05:0,15,361	./.	./.	1/1:24,0:26:2.67:95,3,0	1/1:30,0:31:24.08:800,24,0	1/1:22,0:21:11.86:168,12,0	1/1:48,0:47:7.80:53,8,0	1/1:19,7:29:18.06:720,18,0	1/1:18,0:25:36.11:1100,36,0	1/1:11,0:15:3.01:104,3,0	1/1:15,0:23:15.05:512,15,0	0/0:24,0:24:27.08:0,27,597	1/1:29,0:32:9.03:284,9,0	1/1:28,0:31:3.01:104,3,0	1/1:16,0:16:12.04:349,12,0	1/1:18,0:18:15.05:417,15,0	0/1:13,3:17:7.62:470,0,8	1/1:9,2:11:6.02:185,6,0	1/1:15,8:24:24.08:930,24,0	1/1:16,0:33:35.92:292,36,0	0/0:17,0:18:21.07:0,21,491	1/1:13,1:15:2.97:94,3,0	1/1:19,0:19:2.83:87,3,0	1/1:15,1:21:21.07:699,21,0	1/1:15,0:24:26.98:273,27,0	1/1:14,7:21:15.05:607,15,0	./.
chr10	41316163	.	T	TA	2428.59	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=2.919;DP=541;FS=11.347;HRun=7;HaplotypeScore=53.2834;InbreedingCoeff=0.9686;MQ=65.66;MQ0=0;MQRankSum=-0.892;QD=29.62;ReadPosRankSum=0.227;VQSLOD=3.3826;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:46.16:0,46,562	0/0:16,0:16:42.07:0,42,406	0/0:11,0:10:18.02:0,18,174	0/0:5,0:5:6.01:0,6,58	1/1:4,28:32:84.19:995,84,0	0/0:16,0:16:42.07:0,42,405	0/0:13,0:13:36.05:0,36,348	0/0:30,0:30:72.09:0,72,684	0/0:21,0:21:57.07:0,57,544	0/0:33,0:33:93.14:0,93,894	0/0:24,0:24:63.10:0,63,608	0/0:15,0:15:45.01:0,45,423	0/0:20,0:20:48.02:0,48,445	1/1:1,14:15:42.13:507,42,0	0/0:10,0:10:27.04:0,27,261	1/1:1,18:19:51.16:616,51,0	1/1:3,13:16:39.12:471,39,0	0/0:21,0:21:57.09:0,57,549	0/0:18,0:18:48.08:0,48,464	0/0:23,0:23:57.06:0,57,538	0/0:15,0:15:42.07:0,42,406	0/0:16,0:16:33.03:0,33,312	0/0:25,0:25:75.12:0,75,724	0/0:11,0:11:30.05:0,30,290	0/0:29,0:29:78.05:0,78,731	0/0:24,0:24:69.08:0,69,655	0/0:23,0:22:69.10:0,69,660	0/0:15,0:15:39.06:0,39,376
chr10	41316781	.	GATGA	G	11488.32	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=5.397;DP=806;FS=0.318;HRun=0;HaplotypeScore=175.4652;InbreedingCoeff=0.9891;MQ=69.92;MQ0=0;MQRankSum=-3.678;QD=25.70;ReadPosRankSum=3.775;VQSLOD=4.3692;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,1:40:58.59:0,59,2307	0/0:17,0:17:42.14:0,42,1032	0/0:29,0:26:21.06:0,21,393	0/0:23,0:22:36.12:0,36,832	1/1:4,21:26:57.14:891,57,0	0/0:35,0:35:72.21:0,72,1660	0/0:23,0:23:48.13:0,48,1078	0/0:17,0:31:63.11:0,63,939	1/1:4,20:24:39.13:647,39,0	1/1:7,0:40:88.61:801,89,0	1/1:5,0:19:30.03:279,30,0	1/1:14,24:38:54.18:885,54,0	1/1:9,27:36:66.23:1094,66,0	1/1:10,34:44:90.31:1492,90,0	1/1:6,0:34:65.42:588,65,0	1/1:11,29:40:75.26:1232,75,0	1/1:8,19:27:39.13:646,39,0	1/1:5,0:16:15.02:140,15,0	0/0:8,0:22:45.11:0,45,690	0/0:7,0:38:90.26:0,90,1477	0/0:8,0:34:72.18:0,72,1170	1/1:3,20:23:51.05:783,51,0	1/1:5,26:31:56.89:915,57,0	1/1:8,21:29:48.16:796,48,0	1/1:4,0:20:33.01:300,33,0	0/0:11,0:32:47.32:0,47,1131	0/0:14,0:30:39.13:0,39,723	0/0:2,0:5:9.03:0,9,158
chr10	41317454	.	ACTAC	A	4053.80	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.293;DP=710;FS=0.000;HRun=0;HaplotypeScore=117.8305;InbreedingCoeff=1.0000;MQ=60.17;MQ0=0;MQRankSum=-0.785;QD=57.10;ReadPosRankSum=1.785;VQSLOD=5.1091;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,126,3489	0/0:19,0:19:57.18:0,57,1519	0/0:32,0:25:63.13:0,63,1522	0/0:26,0:19:49.86:0,50,1154	0/0:25,0:25:75.26:0,75,2132	0/0:21,0:21:63.20:0,63,1761	0/0:16,0:16:48.15:0,48,1291	0/0:26,0:26:75.24:0,75,1933	1/1:0,25:25:72.25:1508,72,0	0/0:25,0:25:72.25:0,72,2086	0/0:17,0:17:51.17:0,51,1436	0/0:27,0:27:81.28:0,81,2345	1/1:0,21:21:60.16:1211,60,0	0/0:27,0:27:81.28:0,81,2345	0/0:26,0:26:78.27:0,78,2139	0/0:31,0:31:93.28:0,93,2519	0/0:34,0:34:99:0,102,2888	0/0:28,0:28:84.25:0,84,2353	0/0:29,0:28:84.27:0,84,2276	0/0:28,0:28:75.69:0,76,2046	0/0:24,0:24:72.21:0,72,1914	1/1:0,25:25:69.15:1336,69,0	0/0:27,0:27:81.26:0,81,2238	0/0:17,0:17:51.18:0,51,1459	0/0:27,0:27:81.28:0,81,2347	0/0:19,0:19:57.18:0,57,1588	0/0:32,0:32:96.33:0,96,2731	0/0:14,0:14:42.14:0,42,1192
chr10	41317675	.	ATACACACATGTACACACATACATG	A	3548.97	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=8.382;DP=879;FS=0.000;HRun=0;HaplotypeScore=519.4478;InbreedingCoeff=0.8383;MQ=62.40;MQ0=5;MQRankSum=-7.544;QD=27.51;ReadPosRankSum=-1.825;VQSLOD=0.1092;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:66.20:0,66,5698	0/0:10,0:10:24.07:0,24,1845	0/0:26,0:14:33.05:0,33,1787	0/1:31,0:14:14.27:14,0,759	0/0:43,0:43:94.73:0,95,8231	0/0:27,0:27:66.21:0,66,6092	0/0:28,0:28:66.23:0,66,5539	0/0:42,0:42:84.27:0,84,5554	1/1:13,15:28:22.63:1207,23,0	0/0:45,0:45:99:0,108,9600	0/0:24,0:24:57.18:0,57,3895	0/0:41,0:41:93.31:0,93,7792	1/1:9,24:33:24.08:1273,24,0	0/0:27,0:27:66.23:0,66,6769	0/0:46,0:46:99:0,126,12063	0/0:33,0:32:78.25:0,78,6691	0/0:22,0:23:51.15:0,51,3780	0/0:22,0:22:54.19:0,54,5500	0/0:16,0:16:30.10:0,30,2662	0/0:36,0:36:99:0,99,8913	0/0:50,0:50:99:0,109,9633	1/1:16,21:37:22.19:1054,22,0	0/0:25,0:25:54.17:0,54,4715	0/0:36,0:36:87.26:0,87,7428	0/0:37,0:37:84.27:0,84,7656	0/0:40,0:40:99:0,102,9521	0/0:30,0:30:72.16:0,72,5382	0/0:14,0:14:33.11:0,33,2635
chr10	41318347	.	T	TTG	2805.45	PASS	AB=0.950;AC=22;AF=0.393;AN=56;BaseQRankSum=-6.315;DP=617;FS=8.623;HRun=0;HaplotypeScore=130.7746;InbreedingCoeff=0.5621;MQ=59.18;MQ0=9;MQRankSum=0.970;QD=9.67;ReadPosRankSum=-1.674;VQSLOD=2.4939;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:29:56.66:0,57,599	0/0:8,0:8:21.06:0,21,247	0/0:31,0:15:8.73:0,9,68	0/0:32,0:12:12.03:0,12,138	0/1:18,0:16:1.94:2,0,65	0/0:19,0:19:5.36:0,5,22	0/0:21,0:21:11.19:0,11,53	1/1:35,2:36:3.68:197,4,0	0/1:23,0:23:91.84:92,0,112	0/0:24,0:24:12.14:0,12,92	0/0:20,0:20:18.75:0,19,77	1/1:8,12:21:0.27:180,0,0	0/0:18,0:18:43.66:0,44,258	0/0:18,0:17:16.18:0,16,69	0/0:34,0:34:61.47:0,61,255	0/0:13,0:13:12.75:0,13,55	0/0:15,0:15:2.04:0,2,6	0/0:20,0:20:27.78:0,28,125	1/1:16,4:20:18.52:254,19,0	1/1:20,11:31:2.02:441,2,0	0/1:12,3:15:17.96:194,0,18	0/1:22,0:22:1.98:2,0,81	1/1:7,7:14:12.04:182,12,0	1/1:11,24:35:45.15:681,45,0	0/0:25,0:24:28.46:0,28,125	1/1:17,7:24:21.07:317,21,0	1/1:10,12:23:5.98:341,6,0	1/1:4,1:5:9.02:106,9,0
chr10	41318360	.	TGTGTGTGTGC	T	2134.62	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=-2.163;DP=685;FS=25.241;HRun=0;HaplotypeScore=200.9405;InbreedingCoeff=0.4043;MQ=56.22;MQ0=17;MQRankSum=-4.255;QD=7.29;ReadPosRankSum=-4.207;VQSLOD=-0.1330;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:32:64.17:0,64,2513	0/0:9,0:9:27.01:0,27,959	0/0:56,0:16:26.54:0,27,384	0/1:57,0:18:26.57:27,0,488	1/1:23,0:21:22.06:517,22,0	1/1:3,14:17:10.59:268,11,0	1/1:5,21:26:15.05:435,15,0	0/1:33,0:32:99:114,0,709	0/0:23,0:23:55.60:0,56,1476	0/1:21,0:21:13.73:14,0,797	0/0:21,0:21:21.07:0,21,527	0/0:20,0:20:23.92:0,24,686	0/0:19,0:19:29.22:0,29,1777	1/1:16,0:15:18.06:427,18,0	0/0:37,0:37:69.24:0,69,1753	1/1:13,0:13:15.05:355,15,0	1/1:18,0:18:6:95,6,0	0/0:19,0:19:29.70:0,30,618	0/0:20,0:19:7.40:0,7,787	0/0:30,0:30:18.71:0,19,1628	0/1:17,0:16:12.79:13,0,893	0/0:23,0:23:37.51:0,38,1012	0/0:11,0:11:14.81:0,15,434	0/0:40,0:39:66.10:0,66,1960	0/0:31,0:30:13.75:0,14,1209	0/1:25,0:25:34.74:35,0,1237	0/1:22,0:22:13.80:14,0,937	0/1:5,0:5:11.22:11,0,155
chr10	41318367	.	GTGCGTGTGTGTGTGTA	G	2808.01	PASS	AB=0.844;AC=9;AF=0.161;AN=56;BaseQRankSum=-0.352;DP=680;FS=10.031;HRun=0;HaplotypeScore=252.0013;InbreedingCoeff=0.5616;MQ=56.30;MQ0=17;MQRankSum=-2.682;QD=23.40;ReadPosRankSum=-0.500;VQSLOD=0.7419;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:32:70.19:0,70,3975	0/0:9,0:9:27.09:0,27,1501	0/0:60,0:17:40.94:0,41,998	0/0:63,0:20:42.01:0,42,1187	1/1:2,21:21:27.06:1079,27,0	0/0:16,0:16:11.44:0,11,135	0/0:23,0:23:13.67:0,14,65	0/0:31,0:30:29.81:0,30,1438	0/1:27,0:27:99:138,0,1930	0/0:20,0:20:47.75:0,48,1629	0/0:20,0:20:21.07:0,21,1036	0/0:20,0:20:23.86:0,24,1169	0/0:19,0:19:50.65:0,51,2489	1/1:2,15:16:18.06:849,18,0	0/0:40,0:40:69.24:0,69,3421	1/1:0,14:14:15.05:707,15,0	0/1:2,14:16:33.92:135,0,34	0/0:19,0:19:29.80:0,30,1158	0/0:19,0:17:38.88:0,39,1354	0/0:28,0:28:65.77:0,66,3100	0/0:15,0:14:10.97:0,11,1624	0/1:23,0:23:55.40:55,0,1460	0/0:10,0:10:17.63:0,18,729	0/0:40,0:39:66.23:0,66,3843	0/0:26,0:25:69.14:0,69,2902	0/0:24,0:24:62.32:0,62,2460	0/0:20,0:20:35.59:0,36,1694	0/0:5,0:5:7.90:0,8,392
chr10	41318368	.	TGC	T	5751.48	PASS	AB=0.983;AC=40;AF=0.714;AN=56;BaseQRankSum=-4.201;DP=672;FS=3.886;HRun=0;HaplotypeScore=113.2783;InbreedingCoeff=0.0745;MQ=56.28;MQ0=17;MQRankSum=-2.137;QD=10.09;ReadPosRankSum=-4.334;VQSLOD=3.7338;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:32:30.49:0,30,882	0/0:10,0:10:29.94:0,30,419	0/0:59,0:16:24.69:0,25,234	0/1:62,0:19:51.20:51,0,159	1/1:23,0:21:26.14:152,26,0	1/1:15,0:15:11.82:79,12,0	1/1:23,0:23:14.71:90,15,0	0/1:31,0:30:9.56:417,0,10	0/1:28,0:28:76.79:316,0,77	1/1:1,19:20:53.66:637,54,0	1/1:1,19:20:21.07:319,21,0	0/1:19,0:19:37.26:58,0,37	0/1:18,1:19:75.09:75,0,189	1/1:16,0:15:17.31:93,17,0	1/1:1,39:40:68.71:1026,69,0	1/1:14,0:14:14.51:80,15,0	1/1:16,0:16:5.90:40,6,0	1/1:2,16:18:14.51:394,15,0	0/1:18,0:16:23.51:113,0,24	0/1:28,0:28:46.41:153,0,46	0/1:15,0:14:49.49:73,0,49	0/1:20,3:23:56.88:301,0,57	1/1:9,0:9:2.28:43,2,0	1/1:40,0:39:12.21:195,12,0	1/1:16,10:25:48.11:678,48,0	1/1:22,0:22:6.33:275,6,0	0/1:20,0:20:7.96:38,0,8	1/1:5,0:5:7.52:58,8,0
chr10	41318572	.	AGT	A	10158.39	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=12.249;DP=625;FS=7.720;HRun=0;HaplotypeScore=77.5646;InbreedingCoeff=0.9986;MQ=76.13;MQ0=2;MQRankSum=-0.505;QD=44.36;ReadPosRankSum=4.730;VQSLOD=6.4705;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,132,2658	0/0:6,0:6:18.06:0,18,354	0/0:35,0:35:99:0,105,2082	0/0:32,0:32:89.92:0,90,1786	0/0:16,0:16:48.16:0,48,975	0/0:20,0:20:60.21:0,60,1201	0/0:35,0:35:99:0,102,2070	0/0:34,0:34:99:0,102,2025	1/1:0,20:20:57.19:929,57,0	1/1:0,19:19:57.19:930,57,0	1/1:0,17:17:41.98:672,42,0	1/1:0,17:17:36.12:579,36,0	1/1:0,16:16:45.15:734,45,0	0/0:19,0:19:57.20:0,57,1156	1/1:0,41:40:99:1762,108,0	0/0:15,0:15:45.15:0,45,911	0/0:22,0:22:66.23:0,66,1340	1/1:0,14:14:39.13:636,39,0	0/0:28,0:28:84.28:0,84,1644	0/0:14,0:14:36.12:0,36,730	0/0:22,0:22:66.23:0,66,1264	1/1:0,20:20:60.20:979,60,0	1/1:0,18:18:51.17:832,51,0	1/1:0,25:24:69.24:1126,69,0	1/1:0,22:22:60.20:979,60,0	0/0:28,0:28:36.78:0,37,1564	0/0:17,0:17:51.18:0,51,1035	0/0:9,0:9:27.09:0,27,543
chr10	41319840	.	AT	A	8884.69	PASS	AB=1.000;AC=41;AF=0.732;AN=56;BaseQRankSum=9.013;DP=600;FS=1.180;HRun=10;HaplotypeScore=92.6619;InbreedingCoeff=0.9160;MQ=77.45;MQ0=0;MQRankSum=-2.520;QD=19.66;ReadPosRankSum=2.345;VQSLOD=5.4492;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,111,1143	0/0:14,0:14:39.08:0,39,419	0/1:15,0:16:9.73:10,0,338	0/0:10,0:10:17.96:0,18,167	0/0:35,0:35:84.13:0,84,888	1/1:5,22:27:62.98:547,63,0	1/1:2,22:24:50.99:442,51,0	1/1:11,21:32:59.96:521,60,0	1/1:1,21:22:56.99:495,57,0	1/1:6,20:26:59.94:517,60,0	1/1:0,17:18:44.01:370,44,0	1/1:5,21:26:53.97:469,54,0	1/1:3,18:21:47.99:417,48,0	0/0:19,0:19:25.73:0,26,506	1/1:3,22:25:62.98:547,63,0	0/0:14,0:14:39.09:0,39,423	0/0:14,0:14:36.10:0,36,398	1/1:3,12:15:35.98:312,36,0	1/1:0,12:12:35.97:308,36,0	1/1:4,27:31:77.97:677,78,0	1/1:5,21:26:53.97:469,54,0	1/1:2,15:18:43.98:364,44,0	1/1:2,27:29:56.34:494,56,0	1/1:1,13:14:35.99:313,36,0	1/1:1,16:17:41.99:365,42,0	1/1:1,21:22:59.98:521,60,0	1/1:0,22:22:56.98:495,57,0	1/1:0,9:9:26.99:234,27,0
chr10	41320751	.	T	TTTATCTC	8563.54	PASS	AB=0.736;AC=8;AF=0.143;AN=56;BaseQRankSum=-5.624;DP=722;FS=3.877;HRun=0;HaplotypeScore=157.2290;InbreedingCoeff=0.7084;MQ=84.95;MQ0=0;MQRankSum=-12.859;QD=60.31;ReadPosRankSum=0.189;VQSLOD=4.7572;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,105,2702	0/0:18,0:18:51.17:0,51,1358	0/0:30,0:30:77.37:0,77,1833	0/0:18,0:18:35.57:0,36,997	1/1:2,35:41:89.88:2703,90,0	0/0:20,0:20:60.19:0,60,1546	0/0:12,0:12:33.11:0,33,878	0/0:42,0:42:99:0,120,2892	0/0:25,0:25:75.19:0,75,1814	0/0:33,0:33:99:0,99,2536	0/0:25,0:25:75.26:0,75,1998	0/1:25,1:26:53.12:53,0,1748	0/0:23,0:23:69.21:0,69,1736	1/1:0,19:23:48.12:1900,48,0	0/0:26,0:26:78.25:0,78,2031	0/1:1,21:29:27.66:2077,0,28	1/1:1,19:23:45.15:1831,45,0	0/0:20,0:20:57.11:0,57,1296	0/0:15,0:15:42.14:0,42,1135	0/0:40,0:40:99:0,120,3157	0/0:15,0:15:45.15:0,45,1196	0/0:28,0:28:84.26:0,84,2167	0/0:29,0:29:87.25:0,87,2197	0/0:29,0:29:87.28:0,87,2251	0/0:24,0:24:69.24:0,69,1820	0/0:29,0:29:84.26:0,84,2101	0/0:31,0:31:93.25:0,93,2263	0/0:13,0:13:30.48:0,30,774
chr10	41322158	.	AT	A	6518.10	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=15.074;DP=656;FS=4.629;HRun=6;HaplotypeScore=63.7671;InbreedingCoeff=0.9974;MQ=82.07;MQ0=0;MQRankSum=-0.073;QD=28.22;ReadPosRankSum=-1.015;VQSLOD=5.1053;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:75.24:0,75,986	0/0:12,0:12:33.11:0,33,434	0/0:19,0:19:50.86:0,51,612	0/0:15,0:16:38.96:0,39,485	0/0:23,0:23:66.21:0,66,868	1/1:1,25:26:69.17:742,69,0	1/1:2,16:18:45.09:475,45,0	1/1:5,30:35:90.20:952,90,0	0/0:29,0:29:81.26:0,81,1065	0/0:33,0:33:96.31:0,96,1263	0/0:26,0:26:75.23:0,75,973	0/0:16,0:16:48.16:0,48,632	0/0:21,0:21:63.20:0,63,827	0/0:26,0:26:75.22:0,75,958	0/0:24,0:24:63.18:0,63,800	0/0:18,0:18:51.17:0,51,671	0/0:20,0:20:54.15:0,54,681	0/0:10,0:10:30.10:0,30,395	1/1:4,16:20:48.11:509,48,0	1/1:3,25:28:75.19:806,75,0	1/1:1,29:30:84.21:903,84,0	0/0:21,0:21:60.20:0,60,789	0/0:23,0:23:66.21:0,66,868	0/0:36,0:36:99:0,105,1353	0/0:25,0:25:69.22:0,69,908	1/1:3,27:30:78.12:810,78,0	1/1:1,38:39:99:1161,108,0	1/1:0,5:5:15.04:161,15,0
chr10	41322673	.	CAAAGAGAGAGAGAGAGAG	C	14954.68	PASS	AB=0.969;AC=24;AF=0.429;AN=56;BaseQRankSum=6.703;DP=521;FS=12.679;HRun=0;HaplotypeScore=253.6685;InbreedingCoeff=0.4043;MQ=63.87;MQ0=6;MQRankSum=-6.016;QD=49.36;ReadPosRankSum=3.555;VQSLOD=2.8841;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:69.07:0,69,1887	0/0:8,0:8:24.08:0,24,1399	0/0:23,0:11:19.97:0,20,213	0/0:42,0:18:17.36:0,17,365	0/0:14,0:14:23.53:0,24,948	0/1:12,0:18:47.73:48,0,592	0/0:0,0:15:11.91:0,12,208	1/1:6,13:19:51.01:689,51,0	0/1:22,0:22:99:1178,0,261	0/1:17,0:17:99:355,0,263	0/1:23,0:23:99:603,0,131	0/0:16,0:16:39.12:0,39,2156	1/1:23,0:23:21.17:1801,21,0	0/0:12,0:12:25.49:0,25,1201	0/1:19,0:18:46.86:613,0,47	0/0:9,0:9:27:0,27,1210	0/0:17,0:16:38.90:0,39,1098	0/1:13,0:13:96.92:131,0,97	1/1:0,20:20:56.16:1549,56,0	1/1:0,27:27:36.12:1666,36,0	1/1:4,1:6:15.04:389,15,0	0/1:19,0:19:29.90:1297,0,30	0/0:13,0:13:30:0,30,933	0/0:18,0:18:32.58:0,33,1098	0/1:26,0:26:99:716,0,159	1/1:1,23:24:70:1750,70,0	1/1:0,22:22:27.09:1402,27,0	1/1:0,5:5:15.05:770,15,0
chr10	41322675	.	AAGAGAGAGAGAGAGAG	A	13622.92	PASS	AB=0.537;AC=29;AF=0.518;AN=56;BaseQRankSum=5.342;DP=557;FS=12.871;HRun=0;HaplotypeScore=255.8306;InbreedingCoeff=0.8464;MQ=62.54;MQ0=6;MQRankSum=-5.250;QD=47.30;ReadPosRankSum=2.558;VQSLOD=3.0058;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:32:39.13:0,39,1188	0/0:7,0:8:24.07:0,24,1119	0/0:23,0:11:5.93:0,6,55	0/0:42,0:18:6.48:0,6,132	0/0:21,0:20:17.39:0,17,626	0/0:17,0:17:39.03:0,39,704	0/0:15,0:15:12.04:0,12,221	1/1:19,0:19:4.76:88,5,0	0/1:3,0:22:99:1027,0,176	1/1:5,13:18:36.08:965,36,0	1/1:4,19:23:42.06:1363,42,0	0/0:12,0:20:27.09:0,27,1648	1/1:1,0:24:45.15:1591,45,0	0/0:17,0:17:22.32:0,22,958	1/1:4,17:20:27.09:1166,27,0	0/0:15,0:15:16.87:0,17,891	0/0:18,0:17:26.52:0,27,956	1/1:5,8:13:6.02:267,6,0	1/1:20,0:20:16.18:794,16,0	1/1:27,0:27:36.12:1124,36,0	1/1:6,0:6:8.69:183,9,0	1/1:2,0:19:34:1171,34,0	0/0:10,0:21:19.37:0,19,655	0/0:7,0:20:20.53:0,21,826	1/1:7,18:25:33.11:1399,33,0	1/1:24,0:24:30.64:947,31,0	1/1:22,0:22:27.09:995,27,0	1/1:5,0:5:15.05:543,15,0
chr10	41322731	.	T	TA	2422.59	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=6.080;DP=560;FS=0.485;HRun=4;HaplotypeScore=166.0043;InbreedingCoeff=0.9894;MQ=68.20;MQ0=4;MQRankSum=-3.220;QD=29.54;ReadPosRankSum=-2.287;VQSLOD=1.4892;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:42.12:0,42,475	0/0:5,0:5:15.04:0,15,170	0/0:22,0:19:29.93:0,30,427	0/0:18,0:13:29.86:0,30,310	1/1:2,20:21:54.14:713,54,0	0/0:19,0:19:51.15:0,51,578	0/0:13,0:13:30.08:0,30,340	0/0:42,0:42:99:0,114,1269	0/0:17,0:17:27.07:0,27,306	0/0:20,0:20:60.16:0,60,672	0/0:27,0:27:62.99:0,63,705	0/0:17,0:17:42.11:0,42,476	0/0:30,0:30:69.18:0,69,773	1/1:0,15:15:45.15:615,45,0	0/0:20,0:20:42.12:0,42,476	1/1:5,19:24:51.17:696,51,0	1/1:4,17:21:44.97:559,45,0	0/0:13,0:13:30.09:0,30,340	0/0:18,0:18:42.09:0,42,463	0/0:23,0:23:54.15:0,54,611	0/0:7,0:7:15.04:0,15,170	0/0:22,0:22:51.14:0,51,578	0/0:22,0:22:42.11:0,42,476	0/0:15,0:15:26.91:0,27,304	0/0:24,0:24:51.14:0,51,578	0/0:23,0:23:60.17:0,60,680	0/0:31,0:31:87.25:0,87,984	0/0:9,0:9:24.07:0,24,272
chr10	41323031	.	TTCTCAGTGAA	T	5515.81	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=11.988;DP=660;FS=1.095;HRun=0;HaplotypeScore=195.3824;InbreedingCoeff=0.9926;MQ=84.06;MQ0=0;MQRankSum=-11.955;QD=53.04;ReadPosRankSum=1.718;VQSLOD=4.7595;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,99,4947	0/0:12,0:12:36.12:0,36,1882	0/0:31,0:31:79.46:0,79,3527	0/0:27,0:26:72.25:0,72,3050	1/1:2,16:18:14.16:408,14,0	0/0:18,0:18:51.18:0,51,2579	0/0:21,0:21:63.22:0,63,3164	0/0:35,0:35:90.31:0,90,4268	0/0:24,0:24:69.24:0,69,3435	0/0:28,0:28:72.24:0,72,3588	0/0:11,0:11:30.10:0,30,1447	0/0:25,0:25:66.07:0,66,3163	0/0:13,0:13:36.12:0,36,1806	1/1:1,30:31:81.15:2390,81,0	0/0:30,0:30:81.28:0,81,4122	1/1:5,25:30:60.21:1942,60,0	1/1:6,19:25:24.08:777,24,0	0/0:13,0:13:39.13:0,39,1999	0/0:31,0:31:75.25:0,75,3470	0/0:29,0:29:81.26:0,81,3732	0/0:29,0:29:84.27:0,84,4066	0/0:22,0:22:60.21:0,60,3137	0/0:16,0:16:42.14:0,42,1916	0/0:28,0:28:81.28:0,81,4208	0/0:26,0:26:66.23:0,66,3366	0/0:20,0:20:51.18:0,51,2542	0/0:24,0:24:72.25:0,72,3613	0/0:9,0:9:21.07:0,21,1068
chr10	41324625	.	A	AG	10493.49	PASS	AC=34;AF=0.630;AN=54;BaseQRankSum=11.122;DP=487;FS=2.906;HRun=5;HaplotypeScore=82.3163;InbreedingCoeff=0.9980;MQ=67.74;MQ0=1;MQRankSum=-2.388;QD=34.18;ReadPosRankSum=1.124;VQSLOD=5.0584;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:81.15:0,81,849	0/0:9,0:9:24.04:0,24,247	0/0:20,0:18:41.90:0,42,421	0/0:19,0:16:26.90:0,27,296	0/0:21,0:21:57.14:0,57,613	0/0:11,0:11:27.06:0,27,290	0/0:16,0:16:33.08:0,33,354	1/1:5,20:25:60.20:789,60,0	1/1:2,11:13:33.11:434,33,0	1/1:2,11:13:33.11:434,33,0	1/1:0,17:17:51.17:671,51,0	1/1:1,9:10:27.09:355,27,0	1/1:4,17:22:54.18:710,54,0	0/0:21,0:21:63.16:0,63,677	1/1:2,22:24:57.19:749,57,0	0/0:10,0:10:21.05:0,21,226	0/0:24,0:24:66.16:0,66,708	1/1:1,10:11:27.09:355,27,0	1/1:3,24:26:72.20:929,72,0	1/1:4,22:26:66.20:839,66,0	1/1:2,13:15:39.13:513,39,0	1/1:1,8:9:27.08:344,27,0	1/1:1,10:11:30.05:375,30,0	1/1:0,11:11:33.11:433,33,0	1/1:1,16:17:42.14:552,42,0	1/1:1,23:24:69.22:908,69,0	1/1:2,30:32:84.27:1104,84,0	./.
chr10	41324936	.	G	GT	1961.06	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=1.807;DP=606;FS=8.758;HRun=10;HaplotypeScore=70.4191;InbreedingCoeff=0.9047;MQ=72.88;MQ0=3;MQRankSum=-0.745;QD=15.44;ReadPosRankSum=0.656;VQSLOD=3.6046;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:86.63:0,87,840	0/0:8,0:8:20.97:0,21,172	0/0:27,0:22:0.39:0,0,165	0/0:24,0:19:4.14:0,4,131	1/1:1,1:24:53.03:284,53,0	0/0:22,1:24:36.20:0,36,491	0/0:20,1:23:20.96:0,21,362	0/0:24,0:24:44.88:0,45,369	1/1:3,22:25:60.15:640,60,0	0/0:23,0:23:50.92:0,51,419	0/0:21,0:23:67:0,67,529	0/0:18,0:18:49.19:0,49,397	1/1:5,14:20:9.20:444,9,0	1/1:2,0:17:28.98:158,29,0	0/0:22,0:22:53.89:0,54,439	1/1:0,0:17:29.03:158,29,0	1/1:2,0:10:20.36:119,20,0	0/0:18,0:18:39.88:0,40,303	0/0:17,1:18:9.95:0,10,288	0/0:28,0:28:65.91:0,66,542	0/0:11,0:11:26.94:0,27,218	1/1:1,11:12:33.08:352,33,0	0/0:27,0:28:76.94:0,77,621	0/0:14,0:14:32.93:0,33,271	0/0:24,0:24:56.02:0,56,486	0/0:31,0:31:45.45:0,45,562	0/0:31,2:32:12.96:0,13,522	0/0:11,0:11:23.93:0,24,197
chr10	41326204	.	CAAGT	C	23105.78	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=9.077;DP=664;FS=8.195;HRun=0;HaplotypeScore=146.8138;InbreedingCoeff=0.9829;MQ=57.32;MQ0=5;MQRankSum=-5.908;QD=41.33;ReadPosRankSum=6.243;VQSLOD=4.3695;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:51.18:0,51,1336	0/0:10,0:10:27.09:0,27,713	0/0:40,0:33:81.25:0,81,1921	0/0:35,0:34:87.72:0,88,2037	1/1:3,20:23:30.10:551,30,0	1/1:2,23:25:63.22:1141,63,0	1/1:2,23:25:51.17:919,51,0	1/1:9,23:32:69.20:1207,69,0	1/1:3,26:29:69.17:1228,69,0	1/1:3,20:23:57.13:947,57,0	1/1:6,15:21:33.11:583,33,0	1/1:0,18:18:48.16:882,48,0	1/1:1,32:33:78.27:1432,78,0	1/1:1,11:12:36.06:623,36,0	1/1:3,27:30:75.12:1288,75,0	1/1:4,22:26:72.16:1255,72,0	1/1:1,16:17:37.32:714,37,0	1/1:1,18:19:51.17:938,51,0	1/1:1,10:11:27.08:465,27,0	1/1:3,26:30:72.25:1301,72,0	1/1:3,20:23:47.98:804,48,0	1/1:2,28:30:66.23:1186,66,0	1/1:0,14:14:39.13:712,39,0	1/1:3,14:17:29.09:550,29,0	1/1:0,23:23:54.19:993,54,0	1/1:3,34:36:96.27:1641,96,0	1/1:2,31:33:87.30:1582,87,0	1/1:5,3:8:9.03:165,9,0
chr10	41326259	.	TGTAG	T	3971.73	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=3.108;DP=694;FS=6.817;HRun=0;HaplotypeScore=208.6804;InbreedingCoeff=0.9972;MQ=54.92;MQ0=4;MQRankSum=-3.626;QD=41.81;ReadPosRankSum=2.686;VQSLOD=3.4773;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,102,2782	0/0:11,0:11:33.11:0,33,886	0/0:31,0:15:36.12:0,36,893	0/0:26,0:11:27.09:0,27,668	1/1:4,27:31:60.03:1058,60,0	0/0:27,0:27:69.22:0,69,1785	0/0:32,0:31:81.28:0,81,2217	0/0:24,0:23:69.19:0,69,1709	0/0:24,0:24:69.24:0,69,1784	0/0:38,0:37:99:0,111,3033	0/0:23,0:23:63.22:0,63,1693	0/0:21,0:21:60.21:0,60,1638	0/0:20,0:20:54.19:0,54,1434	1/1:3,17:20:48.16:925,48,0	0/0:34,0:34:99:0,102,2777	1/1:3,18:21:51.17:986,51,0	1/1:2,21:23:54.10:1003,54,0	0/0:22,0:22:54.02:0,54,1345	0/0:19,0:19:48.15:0,48,1191	0/0:37,0:37:99:0,105,2830	0/0:19,0:19:39.13:0,39,1023	0/0:27,0:27:78.23:0,78,2128	0/0:22,0:22:66.23:0,66,1794	0/0:15,0:15:32.87:0,33,903	0/0:32,0:32:87.30:0,87,2304	0/0:28,0:28:84.29:0,84,2256	0/0:26,0:26:75.26:0,75,2005	0/0:6,0:6:17.99:0,18,428
chr10	41327123	.	A	AAGCG	19454.68	PASS	AB=0.846;AC=40;AF=0.714;AN=56;BaseQRankSum=-0.490;DP=454;FS=51.919;HRun=0;HaplotypeScore=118.7305;InbreedingCoeff=0.8183;MQ=44.09;MQ0=5;MQRankSum=-9.722;QD=57.73;ReadPosRankSum=0.579;VQSLOD=3.3541;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:42:99:0,105,1936	0/0:3,0:3:6.02:0,6,112	0/0:8,0:6:8.24:0,8,95	0/1:7,0:5:0.92:1,0,17	0/0:16,0:16:36.12:0,36,672	1/1:2,13:15:45.15:1144,45,0	1/1:3,22:24:60.16:1512,60,0	1/1:4,7:15:24.04:478,24,0	1/1:2,15:16:42.14:1042,42,0	1/1:2,14:17:51.17:1293,51,0	1/1:5,10:14:33.09:705,33,0	1/1:2,20:22:60.20:1525,60,0	1/1:5,13:17:42.14:1049,42,0	0/0:11,0:11:27.04:0,27,436	1/1:6,16:23:22.23:1058,22,0	0/0:14,0:14:42.13:0,42,754	0/0:22,0:22:38.93:0,39,690	1/1:1,8:9:27.09:676,27,0	1/1:7,9:14:42.09:910,42,0	1/1:4,12:18:42.14:1078,42,0	1/1:3,7:10:21.02:355,21,0	1/1:4,15:19:48.13:1158,48,0	1/1:2,13:15:36.12:946,36,0	1/1:2,5:7:6.02:159,6,0	1/1:2,10:12:33.10:774,33,0	1/1:11,17:25:75.21:1770,75,0	1/1:3,17:20:60.19:1486,60,0	0/1:5,4:8:72.57:334,0,73
chr10	41327175	.	A	AC	19706.30	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-2.756;DP=591;FS=8.433;HRun=1;HaplotypeScore=97.5374;InbreedingCoeff=0.9672;MQ=77.20;MQ0=0;MQRankSum=-7.129;QD=39.10;ReadPosRankSum=1.714;VQSLOD=4.8687;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,123,1595	0/0:4,0:4:9.03:0,9,116	0/0:24,0:24:63.06:0,63,747	0/0:15,0:15:41.28:0,41,459	1/1:0,26:26:78.11:1113,78,0	1/1:4,18:22:48.12:692,48,0	1/1:3,22:25:72.16:1027,72,0	1/1:2,26:28:78.19:1067,78,0	1/1:0,13:13:33.11:493,33,0	1/1:0,18:18:54.18:804,54,0	1/1:1,20:21:57.19:852,57,0	1/1:3,23:26:66.13:923,66,0	1/1:0,21:21:60.20:897,60,0	1/1:0,10:10:27.09:404,27,0	1/1:4,21:25:54.18:806,54,0	1/1:0,22:22:66.22:989,66,0	1/1:1,23:24:63.21:943,63,0	1/1:0,14:14:42.14:629,42,0	1/1:6,20:26:69.18:964,69,0	1/1:0,23:23:63.13:907,63,0	1/1:2,22:24:54.18:808,54,0	1/1:3,15:18:42.03:597,42,0	1/1:1,19:20:51.17:761,51,0	1/1:1,16:17:45.15:672,45,0	1/1:0,13:13:39.13:582,39,0	1/1:3,26:29:81.23:1186,81,0	1/1:1,34:33:99:1455,99,0	1/1:0,3:3:9.03:135,9,0
chr10	41327815	.	T	TA	6898.17	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-4.324;DP=591;FS=11.967;HRun=1;HaplotypeScore=109.4912;InbreedingCoeff=0.9975;MQ=86.55;MQ0=0;MQRankSum=-8.276;QD=37.69;ReadPosRankSum=-2.718;VQSLOD=2.6627;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,114,1478	0/0:7,0:7:21.01:0,21,241	0/0:25,0:25:65.73:0,66,758	0/0:22,0:22:54.11:0,54,665	0/0:23,0:23:63.09:0,63,766	1/1:0,20:19:60.20:885,60,0	1/1:5,20:24:68.92:850,69,0	1/1:8,38:46:99:1779,129,0	0/0:20,0:20:54.16:0,54,685	0/0:19,0:19:54.07:0,54,626	0/0:16,0:16:48.12:0,48,591	0/0:25,0:25:72.16:0,72,894	0/0:26,0:26:72.15:0,72,883	0/0:24,0:24:72.18:0,72,877	0/0:17,0:17:39.08:0,39,487	0/0:30,0:30:90.26:0,90,1128	0/0:25,0:25:72.15:0,72,883	0/0:23,0:23:60.20:0,60,778	1/1:4,9:13:36.10:480,36,0	1/1:3,15:18:51.08:678,51,0	1/1:5,9:14:26.95:328,27,0	0/0:23,0:23:54.16:0,54,676	0/0:20,0:20:48.13:0,48,594	0/0:13,0:13:33.06:0,33,408	0/0:11,0:11:24.07:0,24,300	1/1:1,25:26:39.33:1069,39,0	1/1:1,13:14:42.06:564,42,0	1/1:0,7:6:18.06:266,18,0
chr10	41327848	.	TC	T	12832.20	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=14.968;DP=572;FS=39.180;HRun=2;HaplotypeScore=120.3261;InbreedingCoeff=0.9893;MQ=76.35;MQ0=0;MQRankSum=-6.329;QD=34.40;ReadPosRankSum=0.516;VQSLOD=1.8800;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,123,1820	0/0:9,0:9:27.09:0,27,405	0/0:23,0:23:57.16:0,57,787	0/0:24,0:24:66.13:0,66,905	0/0:23,0:23:69.23:0,69,1031	1/1:2,18:20:54.13:680,54,0	1/1:5,26:30:84.23:1045,84,0	1/1:2,23:25:72.23:933,72,0	1/1:1,19:20:54.16:686,54,0	1/1:0,25:25:69.22:895,69,0	1/1:0,14:14:39.06:485,39,0	1/1:0,17:17:48.16:623,48,0	1/1:0,26:26:66.21:852,66,0	0/0:25,0:25:75.25:0,75,1123	1/1:0,18:18:42.14:545,42,0	0/0:31,0:31:93.32:0,93,1393	0/0:23,0:23:69.23:0,69,1032	1/1:0,27:27:78.25:1013,78,0	1/1:1,15:16:48.15:609,48,0	1/1:1,17:18:48.10:602,48,0	1/1:0,14:14:39.08:485,39,0	1/1:0,24:24:66.15:831,66,0	1/1:0,17:17:41.87:523,42,0	1/1:1,12:13:30.10:389,30,0	1/1:0,10:10:21.07:273,21,0	1/1:4,15:19:57.16:702,57,0	1/1:0,14:14:42.14:545,42,0	1/1:1,4:4:9.03:117,9,0
chr10	41327923	.	G	GGTCTA	7800.96	PASS	AB=0.571;AC=17;AF=0.304;AN=56;BaseQRankSum=-2.464;DP=519;FS=28.257;HRun=0;HaplotypeScore=147.6316;InbreedingCoeff=0.8817;MQ=87.25;MQ0=0;MQRankSum=-13.670;QD=54.17;ReadPosRankSum=-0.236;VQSLOD=3.3462;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:87.28:0,87,1728	0/0:9,0:9:27.09:0,27,542	0/0:25,0:26:51.22:0,51,1157	0/0:21,0:21:45.15:0,45,875	0/0:25,0:25:66.23:0,66,1354	1/1:9,16:25:39.59:1517,40,0	1/1:10,10:18:21.07:577,21,0	1/1:14,12:24:48.15:1276,48,0	0/0:20,0:20:45.14:0,45,873	0/0:15,0:15:39.13:0,39,800	0/0:18,0:18:51.18:0,51,1045	0/0:15,0:15:42.14:0,42,839	0/0:22,0:22:42.13:0,42,790	0/0:20,0:20:57.20:0,57,1136	0/0:13,0:13:36.12:0,36,723	0/0:25,0:24:69.21:0,69,1315	0/0:25,0:25:60.19:0,60,1182	0/0:22,0:22:54.19:0,54,1076	1/1:8,2:10:12.04:336,12,0	1/1:3,16:19:48.15:1390,48,0	1/1:8,2:10:9.03:232,9,0	0/0:17,0:17:48.15:0,48,929	0/0:19,0:19:48.06:0,48,985	0/0:19,0:19:48.12:0,48,943	0/0:12,0:12:27.09:0,27,554	0/1:4,12:16:99:1069,0,137	1/1:4,11:15:42.14:1220,42,0	1/1:1,2:3:6.02:183,6,0
chr10	41327970	.	TCTTC	T	535.03	PASS	AB=1.000;AC=18;AF=0.391;AN=46;BaseQRankSum=0.057;DP=458;FS=2.288;HRun=0;HaplotypeScore=123.5194;InbreedingCoeff=0.3786;MQ=63.99;MQ0=12;MQRankSum=1.334;QD=3.01;ReadPosRankSum=1.278;VQSLOD=2.3366;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:28,5:31:26.06:377,26,0	1/1:8,0:8:3:25,3,0	./.	./.	0/0:20,0:20:15.05:0,15,314	0/0:19,0:18:8.84:0,9,62	0/1:18,0:15:0:0,0,0	./.	0/0:19,0:19:6.44:0,6,48	0/1:14,0:13:8.54:23,0,9	1/1:16,0:15:3.01:45,3,0	0/1:13,0:13:10.32:10,0,79	1/1:17,0:17:2.98:21,3,0	1/1:13,6:18:6.02:91,6,0	1/1:13,0:13:8.82:58,9,0	0/0:26,0:25:30.07:0,30,557	0/0:29,0:27:38.89:0,39,643	0/0:12,0:12:4.21:0,4,23	0/0:11,0:11:6:0,6,61	0/0:13,0:13:2.97:0,3,20	./.	1/1:10,0:9:2.96:19,3,0	./.	0/0:17,0:15:3.01:0,3,50	0/1:17,0:16:12.38:12,0,28	0/0:15,0:14:6.01:0,6,60	0/0:14,0:13:4.12:0,4,18	0/0:4,0:4:5.90:0,6,36
chr10	41328542	.	C	CT	15550.17	PASS	AB=1.000;AC=45;AF=0.804;AN=56;BaseQRankSum=-3.532;DP=565;FS=27.692;HRun=2;HaplotypeScore=68.4676;InbreedingCoeff=0.6471;MQ=79.29;MQ0=0;MQRankSum=-5.035;QD=31.41;ReadPosRankSum=5.356;VQSLOD=2.9508;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:60.18:0,60,731	0/0:11,0:11:33.09:0,33,396	0/0:19,0:17:8.86:0,9,250	0/0:18,0:18:32.04:0,32,340	0/1:29,0:29:8.88:142,0,9	1/1:1,28:29:78.26:1117,78,0	1/1:1,26:27:63.21:905,63,0	1/1:2,26:28:78.18:1045,78,0	1/1:0,30:30:75.14:1026,75,0	1/1:1,17:17:48.12:649,48,0	1/1:0,12:12:36.07:494,36,0	1/1:0,20:20:51.17:733,51,0	1/1:1,22:23:60.20:859,60,0	0/1:17,0:17:7.68:91,0,8	1/1:0,23:23:57.19:817,57,0	1/1:28,0:28:14.77:150,15,0	0/1:15,0:15:30.42:78,0,30	1/1:3,22:25:63.21:893,63,0	1/1:0,15:15:45.03:566,45,0	1/1:2,13:15:36.12:517,36,0	1/1:2,24:26:66.22:949,66,0	1/1:0,14:14:39.13:561,39,0	1/1:1,11:12:33.11:474,33,0	1/1:1,31:32:81.27:1163,81,0	1/1:0,16:16:45.15:647,45,0	1/1:0,22:22:66.22:948,66,0	1/1:0,16:16:48.04:639,48,0	1/1:0,2:2:6.02:86,6,0
chr10	41328544	.	T	TA	8599.41	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=5.028;DP=555;FS=7.297;HRun=8;HaplotypeScore=92.7120;InbreedingCoeff=0.9049;MQ=77.54;MQ0=0;MQRankSum=-4.787;QD=17.55;ReadPosRankSum=4.930;VQSLOD=4.4611;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:57.01:0,57,516	0/0:11,0:11:30.01:0,30,274	0/0:16,1:15:3.23:0,3,157	0/0:16,0:17:18.58:0,19,254	1/1:5,26:31:78.15:871,78,0	1/1:28,0:28:76.73:525,77,0	1/1:24,0:24:61.19:366,61,0	1/1:25,0:25:63.36:352,63,0	1/1:30,0:30:68.67:459,69,0	1/1:18,0:17:18.46:194,18,0	1/1:12,0:12:31.63:167,32,0	1/1:20,0:20:49.26:278,49,0	1/1:23,0:23:58.87:398,59,0	1/1:2,15:17:45.13:519,45,0	1/1:23,0:23:55.68:366,56,0	1/1:3,26:29:75.22:866,75,0	1/1:2,13:15:36.11:415,36,0	1/1:23,0:23:61.35:366,61,0	1/1:15,0:15:31.60:170,32,0	1/1:13,0:13:18.73:190,19,0	1/1:27,0:27:24.35:333,24,0	1/1:14,0:14:37.54:203,38,0	1/1:13,0:13:10.78:154,11,0	1/1:33,0:33:39.25:444,39,0	1/1:16,0:16:43.42:249,43,0	1/1:22,0:22:64.16:392,64,0	1/1:17,0:16:42.22:280,42,0	1/1:2,0:2:5.92:41,6,0
chr10	41329113	.	GAC	G	19669.98	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=8.141;DP=625;FS=9.523;HRun=0;HaplotypeScore=81.2417;InbreedingCoeff=0.9993;MQ=86.06;MQ0=1;MQRankSum=-4.936;QD=37.18;ReadPosRankSum=4.692;VQSLOD=7.0162;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,144,2622	0/0:8,0:8:24.07:0,24,409	0/0:25,0:25:69.11:0,69,1146	0/0:14,0:14:41.79:0,42,645	1/1:2,17:19:45.15:644,45,0	1/1:0,32:32:75.25:1074,75,0	1/1:2,21:23:57.19:817,57,0	1/1:0,28:28:84.27:1182,84,0	1/1:0,23:23:60.20:859,60,0	1/1:0,23:23:69.22:970,69,0	1/1:0,20:20:57.19:817,57,0	1/1:3,16:19:48.16:685,48,0	1/1:1,18:19:38.92:559,39,0	1/1:0,27:27:69.23:989,69,0	1/1:0,18:17:42.14:602,42,0	1/1:0,16:16:42.14:602,42,0	1/1:2,25:27:66.22:945,66,0	1/1:1,22:23:60.20:859,60,0	1/1:1,24:25:72.24:1028,72,0	1/1:1,28:29:81.23:1137,81,0	1/1:0,14:14:33.11:473,33,0	1/1:0,15:15:39.13:559,39,0	1/1:0,20:20:54.03:773,54,0	1/1:0,24:24:63.21:903,63,0	1/1:1,17:18:45.15:645,45,0	1/1:1,21:22:63.19:882,63,0	1/1:3,29:32:78.26:1109,78,0	1/1:0,13:13:39.13:558,39,0
chr10	41329925	.	G	GA	3608.15	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-12.299;DP=679;FS=5.154;HRun=4;HaplotypeScore=67.7581;InbreedingCoeff=0.9977;MQ=82.17;MQ0=0;MQRankSum=-1.847;QD=35.37;ReadPosRankSum=2.829;VQSLOD=4.3316;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,108,1213	0/0:12,0:12:36.10:0,36,408	0/0:32,0:32:89.85:0,90,932	0/0:31,0:30:63.98:0,64,651	1/1:2,26:28:78.17:1025,78,0	0/0:32,0:32:87.22:0,87,966	0/0:20,0:20:57.16:0,57,647	0/0:30,0:30:78.22:0,78,885	0/0:29,0:29:84.24:0,84,953	0/0:22,0:22:63.18:0,63,715	0/0:18,0:18:54.15:0,54,612	0/0:26,0:26:63.18:0,63,714	0/0:18,0:18:54.15:0,54,612	1/1:4,22:26:63.21:859,63,0	0/0:15,0:15:45.13:0,45,511	1/1:1,24:25:66.22:903,66,0	1/1:0,23:23:60.20:821,60,0	0/0:25,0:25:75.17:0,75,825	0/0:18,0:18:54.15:0,54,605	0/0:29,0:28:84.22:0,84,943	0/0:25,0:25:72.21:0,72,816	0/0:19,0:19:57.16:0,57,646	0/0:26,0:26:75.21:0,75,851	0/0:18,0:18:54.15:0,54,613	0/0:24,0:24:69.20:0,69,783	0/0:31,0:31:87.24:0,87,979	0/0:29,0:29:81.22:0,81,908	0/0:7,0:7:18.05:0,18,204
chr10	41331723	.	AGACT	A	9080.69	PASS	AB=0.516;AC=17;AF=0.304;AN=56;BaseQRankSum=10.824;DP=515;FS=0.358;HRun=0;HaplotypeScore=113.3401;InbreedingCoeff=0.8859;MQ=75.29;MQ0=0;MQRankSum=-10.278;QD=56.40;ReadPosRankSum=-1.341;VQSLOD=5.8162;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:72.25:0,72,2080	0/0:9,0:9:27.09:0,27,782	0/0:15,0:15:44.82:0,45,1185	0/0:19,0:19:57.20:0,57,1623	0/0:17,0:17:51.18:0,51,1432	1/1:0,24:24:60.21:1258,60,0	1/1:0,19:19:54.18:1106,54,0	1/1:0,35:35:99:2059,105,0	0/0:20,0:20:60.21:0,60,1680	0/0:22,0:22:66.23:0,66,1846	0/0:17,0:17:51.18:0,51,1469	0/0:27,0:27:81.28:0,81,2310	0/0:21,0:21:63.22:0,63,1826	0/0:21,0:21:63.22:0,63,1796	0/0:22,0:22:57.20:0,57,1623	0/0:17,0:17:51.16:0,51,1387	0/0:21,0:21:63.19:0,63,1760	0/0:19,0:19:57.18:0,57,1588	1/1:0,12:12:36.09:667,36,0	1/1:0,17:17:51.18:1069,51,0	1/1:0,16:16:39.13:771,39,0	0/0:14,0:14:42.14:0,42,1217	0/0:15,0:15:45.15:0,45,1266	0/0:18,0:18:54.19:0,54,1563	0/0:15,0:15:42.14:0,42,1216	0/1:1,15:16:38.86:853,0,39	1/1:0,21:21:60.21:1235,60,0	1/1:0,1:1:3.01:63,3,0
chr10	41331914	.	T	TG	266.82	PASS	AC=4;AF=0.077;AN=52;BaseQRankSum=-1.174;DP=157;FS=0.000;HRun=6;HaplotypeScore=20.9375;InbreedingCoeff=0.5495;MQ=51.01;MQ0=8;MQRankSum=-1.392;QD=20.52;ReadPosRankSum=0.136;VQSLOD=1.7602;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:5:12.03:0,12,122	0/0:3,0:3:9.02:0,9,92	./.	./.	0/0:4,0:4:12.03:0,12,122	1/1:0,3:3:9.03:113,9,0	1/1:2,8:10:21.07:264,21,0	0/0:10,0:9:14.82:0,15,134	0/0:5,0:5:15.03:0,15,153	0/0:7,0:7:15.03:0,15,153	0/0:1,0:1:2.98:0,3,21	0/0:6,0:5:5.95:0,6,61	0/0:5,0:5:12.02:0,12,122	0/0:10,0:10:15.03:0,15,153	0/0:6,0:5:6.01:0,6,61	0/0:4,0:4:6:0,6,55	0/0:10,0:10:21.04:0,21,214	0/0:5,0:5:12.03:0,12,122	0/0:3,0:3:3.01:0,3,30	0/0:8,0:8:18.04:0,18,184	0/0:8,0:7:18.02:0,18,176	0/0:3,0:3:6.01:0,6,61	0/0:6,0:6:18.04:0,18,183	0/0:4,0:3:6.01:0,6,61	0/0:6,0:6:12.03:0,12,122	0/0:8,0:8:18.03:0,18,176	0/0:7,0:7:15.03:0,15,152	0/0:5,0:4:12.03:0,12,122
chr10	41331931	.	TG	T	561.33	PASS	AB=0.905;AC=33;AF=0.786;AN=42;BaseQRankSum=-1.075;DP=87;FS=0.000;HRun=8;HaplotypeScore=15.5372;InbreedingCoeff=0.2193;MQ=47.39;MQ0=8;MQRankSum=0.275;QD=8.50;ReadPosRankSum=-0.125;VQSLOD=-0.6777;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:3,0:2:6.02:0,6,72	0/0:2,0:2:3.01:0,3,35	./.	./.	1/1:2,0:2:2.99:24,3,0	./.	./.	1/1:1,4:4:6.01:58,6,0	0/1:3,0:4:3.31:3,0,14	1/1:1,4:5:9.01:87,9,0	./.	0/1:3,2:4:10.43:23,0,10	0/0:3,0:4:2.84:0,3,14	1/1:0,5:5:9.01:87,9,0	1/1:2,4:5:3:29,3,0	1/1:1,0:1:2.99:24,3,0	1/1:3,2:5:6.01:58,6,0	1/1:1,3:4:3:29,3,0	./.	1/1:1,1:2:3:29,3,0	1/1:3,3:5:6.01:58,6,0	0/1:0,0:3:0:0,0,0	1/1:3,1:4:3:29,3,0	1/1:0,2:1:3:29,3,0	1/1:1,2:3:6.01:58,6,0	1/1:1,1:2:3:29,3,0	1/1:2,0:2:2.99:24,3,0	./.
chr10	41333474	.	GGTT	G	289.16	PASS	AB=0.833;AC=13;AF=0.813;AN=16;BaseQRankSum=-0.537;DP=42;FS=8.113;HRun=0;HaplotypeScore=19.0895;MQ=125.73;MQ0=1;MQRankSum=-2.489;QD=15.22;ReadPosRankSum=-0.830;VQSLOD=0.8033;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	1/1:0,1:1:3.01:40,3,0	0/0:7,0:7:7.85:0,8,202	0/1:4,1:4:43.37:43,0,76	./.	./.	./.	1/1:0,3:2:6.02:86,6,0	./.	1/1:0,2:2:6.02:87,6,0	./.	./.	1/1:0,3:3:3.01:39,3,0	1/1:0,2:1:3.01:39,3,0	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	1/1:0,3:1:3.01:39,3,0	./.	./.
chr10	41333481	.	AAGG	A	349.09	PASS	AC=18;AF=0.818;AN=22;BaseQRankSum=-1.986;DP=40;FS=4.102;HRun=0;HaplotypeScore=17.0164;InbreedingCoeff=0.3532;MQ=108.71;MQ0=1;MQRankSum=-3.507;QD=17.45;ReadPosRankSum=0.887;VQSLOD=2.6866;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,1:1:3.01:37,3,0	1/1:0,1:1:3.01:42,3,0	0/0:3,0:4:7.84:0,8,84	0/0:6,0:5:10.12:0,10,68	1/1:0,2:2:3.01:38,3,0	./.	./.	1/1:0,3:2:6.02:86,6,0	./.	1/1:0,2:2:6.02:86,6,0	./.	./.	1/1:0,3:3:3.01:39,3,0	1/1:0,2:1:3.01:40,3,0	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	1/1:0,3:3:3.01:38,3,0	1/1:0,3:1:3.01:39,3,0	./.	./.
chr10	41333555	.	TA	T	753.51	PASS	AB=0.668;AC=21;AF=0.389;AN=54;BaseQRankSum=5.073;DP=278;FS=3.441;HRun=14;HaplotypeScore=47.3625;InbreedingCoeff=0.4827;MQ=53.80;MQ0=4;MQRankSum=0.855;QD=5.54;ReadPosRankSum=0.426;VQSLOD=1.7802;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:13,1:13:5.26:0,5,180	0/0:3,0:3:6.01:0,6,56	0/0:10,0:7:5.21:0,5,64	0/0:5,0:3:3.69:0,4,51	1/1:5,0:16:16.23:47,16,0	0/1:4,4:8:12.99:67,0,13	0/1:3,3:7:14.83:40,0,15	1/1:7,11:18:37.71:253,38,0	0/0:7,0:7:14.85:0,15,126	0/0:3,0:8:13.02:0,13,65	0/0:3,0:10:20.23:0,20,115	0/0:5,0:4:11.33:0,11,83	0/0:10,0:10:17.93:0,18,150	1/1:3,0:3:4.06:12,4,0	0/0:6,0:10:23.30:0,23,140	1/1:0,0:8:16.30:47,16,0	1/1:2,0:10:10.17:29,10,0	0/0:4,0:13:23.30:0,23,149	0/1:8,2:11:17.02:36,0,17	0/1:5,6:12:48.27:96,0,48	0/1:4,4:9:14.02:51,0,14	./.	0/0:10,0:11:23.82:0,24,201	0/0:16,0:15:32.85:0,33,285	0/0:7,0:17:33.14:0,33,167	1/1:7,8:16:24.77:155,25,0	1/1:4,4:8:10.92:67,11,0	1/1:1,3:4:5.95:41,6,0
chr10	41333595	.	T	TGAC	6489.27	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-5.697;DP=309;FS=2.720;HRun=0;HaplotypeScore=51.7073;InbreedingCoeff=0.9403;MQ=80.48;MQ0=0;MQRankSum=-9.410;QD=57.43;ReadPosRankSum=-1.524;VQSLOD=6.1343;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:60.21:0,60,999	0/0:3,0:3:9.03:0,9,150	0/0:13,0:13:30.10:0,30,482	0/0:9,0:8:24.08:0,24,388	0/0:14,0:14:39.12:0,39,622	1/1:0,7:7:21.07:471,21,0	1/1:3,9:11:27.06:555,27,0	1/1:5,15:20:54.14:1156,54,0	0/0:9,0:9:27.09:0,27,450	0/0:8,0:8:24.08:0,24,400	0/0:16,0:16:45.15:0,45,749	0/0:8,0:8:18.06:0,18,299	0/0:10,0:10:27.09:0,27,449	0/0:7,0:7:21.05:0,21,324	0/0:9,0:9:27.09:0,27,449	0/0:8,0:8:21.04:0,21,300	0/0:12,0:12:21.07:0,21,345	0/0:12,0:12:24.08:0,24,400	1/1:0,12:12:36.12:803,36,0	1/1:1,14:15:42.14:947,42,0	1/1:0,16:16:33.11:744,33,0	0/0:1,0:1:3.01:0,3,50	0/0:8,0:8:24.08:0,24,399	0/0:18,0:18:51.17:0,51,849	0/0:9,0:9:24.08:0,24,400	1/1:2,18:21:60.04:1297,60,0	1/1:3,4:7:18.06:381,18,0	1/1:0,3:3:6.02:135,6,0
chr10	41334224	.	TAGGG	T	4825.36	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=13.472;DP=686;FS=2.563;HRun=0;HaplotypeScore=120.9259;InbreedingCoeff=0.9986;MQ=92.08;MQ0=0;MQRankSum=-4.864;QD=52.45;ReadPosRankSum=2.036;VQSLOD=5.8641;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,111,2922	0/0:8,0:8:24.08:0,24,658	0/0:37,0:36:99:0,108,2880	0/0:23,0:23:69.18:0,69,1644	1/1:1,19:20:48.16:930,48,0	0/0:26,0:26:78.27:0,78,2109	0/0:31,0:31:87.28:0,87,2290	0/0:33,0:33:96.32:0,96,2548	0/0:26,0:26:78.27:0,78,2113	0/0:31,0:31:78.26:0,78,2104	0/0:21,0:21:63.22:0,63,1723	0/0:19,0:19:51.18:0,51,1396	0/0:24,0:24:66.23:0,66,1734	1/1:0,21:21:60.21:1162,60,0	0/0:26,0:26:75.26:0,75,2054	1/1:0,25:25:72.25:1396,72,0	1/1:1,25:26:69.24:1337,69,0	0/0:17,0:17:51.16:0,51,1298	0/0:20,0:20:60.21:0,60,1646	0/0:26,0:26:75.24:0,75,1962	0/0:39,0:39:99:0,117,3084	0/0:18,0:18:54.19:0,54,1481	0/0:22,0:22:63.03:0,63,1691	0/0:29,0:28:87.26:0,87,2314	0/0:10,0:10:27.09:0,27,740	0/0:23,0:23:69.24:0,69,1850	0/0:37,0:37:99:0,108,2918	0/0:9,0:9:24.08:0,24,622
chr10	41334294	.	CT	C	1865.19	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.650;DP=697;FS=3.167;HRun=3;HaplotypeScore=85.9451;InbreedingCoeff=0.9967;MQ=94.57;MQ0=0;MQRankSum=-2.247;QD=31.61;ReadPosRankSum=0.689;VQSLOD=3.8046;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,108,1554	0/0:6,0:6:18.06:0,18,259	0/0:36,0:36:99:0,99,1402	0/0:28,0:28:64.04:0,64,1050	0/0:26,0:26:72.24:0,72,1035	0/0:28,0:28:81.26:0,81,1149	0/0:22,0:22:66.19:0,66,929	0/0:33,0:33:99:0,99,1426	0/0:28,0:28:84.26:0,84,1175	0/0:27,0:27:78.25:0,78,1092	0/0:30,0:30:87.28:0,87,1235	1/1:1,20:21:54.17:669,54,0	0/0:32,0:32:93.31:0,93,1339	0/0:25,0:25:72.19:0,72,996	0/0:31,0:31:90.30:0,90,1296	0/0:18,0:18:51.14:0,51,712	0/0:23,0:23:69.15:0,69,947	0/0:13,0:13:36.12:0,36,513	0/0:23,0:23:63.21:0,63,907	0/0:22,0:22:66.22:0,66,951	0/0:26,0:26:72.24:0,72,1036	0/0:22,0:22:66.22:0,66,951	1/1:1,23:24:66.21:818,66,0	1/1:0,14:14:42.13:521,42,0	0/0:21,0:21:63.21:0,63,906	0/0:36,0:36:99:0,105,1513	0/0:35,0:35:99:0,105,1493	0/0:9,0:9:27.09:0,27,389
chr10	41334649	.	ACAGCCAGT	A	7671.33	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=13.325;DP=543;FS=9.872;HRun=0;HaplotypeScore=147.3864;InbreedingCoeff=0.9988;MQ=75.71;MQ0=0;MQRankSum=-14.000;QD=75.95;ReadPosRankSum=3.658;VQSLOD=4.9240;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:93.30:0,93,3748	0/0:8,0:8:24.08:0,24,1028	0/0:24,0:24:68.93:0,69,2478	0/0:10,0:10:30.10:0,30,1157	0/0:18,0:18:51.17:0,51,2060	0/0:26,0:26:78.22:0,78,3399	0/0:17,0:17:51.16:0,51,2196	0/0:45,0:45:99:0,132,5705	0/0:12,0:12:36.12:0,36,1572	1/1:0,25:25:72.22:2001,72,0	1/1:3,22:25:63.22:1834,63,0	0/0:15,0:15:45.15:0,45,1996	0/0:16,0:16:48.16:0,48,2100	0/0:27,0:27:81.28:0,81,3626	1/1:1,18:19:48.16:1404,48,0	0/0:17,0:17:51.18:0,51,2296	0/0:24,0:24:72.25:0,72,3011	1/1:1,14:15:36.12:1030,36,0	0/0:16,0:16:48.16:0,48,2037	0/0:13,0:13:36.12:0,36,1517	0/0:17,0:17:45.02:0,45,1772	0/0:21,0:21:63.22:0,63,2759	0/0:16,0:16:48.15:0,48,1817	0/0:26,0:26:78.22:0,78,3370	1/1:0,17:17:48.16:1402,48,0	0/0:15,0:15:45.15:0,45,1870	0/0:20,0:20:60.21:0,60,2647	0/0:8,0:8:24.08:0,24,1087
chr10	41335125	.	GGGTGGT	G	658.35	PASS	AB=0.933;AC=13;AF=0.382;AN=34;BaseQRankSum=-1.148;DP=282;FS=3.287;HRun=0;HaplotypeScore=59.2829;InbreedingCoeff=0.5136;MQ=62.88;MQ0=5;MQRankSum=-4.948;QD=8.23;ReadPosRankSum=0.695;VQSLOD=1.4903;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:16:8.96:0,9,211	./.	./.	0/0:15,0:10:0.47:0,0,1	./.	0/0:10,0:10:3.01:0,3,52	0/1:13,0:14:12.50:55,0,13	./.	0/0:5,0:7:8.83:0,9,55	./.	./.	1/1:9,2:9:3.01:55,3,0	0/0:2,0:9:14.71:0,15,92	1/1:10,3:15:12.04:198,12,0	0/0:8,0:7:6.02:0,6,176	1/1:4,2:6:3.01:61,3,0	1/1:13,4:17:12.04:243,12,0	./.	./.	./.	0/0:19,0:21:11.77:0,12,73	./.	1/1:3,2:5:6.02:114,6,0	1/1:9,3:12:3.01:61,3,0	0/0:4,0:4:6.02:0,6,182	0/0:5,0:7:5.88:0,6,37	0/0:4,0:5:7.42:0,7,39	./.
chr10	41336057	.	A	AG	1921.97	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-8.865;DP=605;FS=4.824;HRun=7;HaplotypeScore=59.6128;InbreedingCoeff=0.9988;MQ=83.67;MQ0=0;MQRankSum=-1.035;QD=27.85;ReadPosRankSum=1.634;VQSLOD=4.5341;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:69.11:0,69,666	0/0:9,0:9:27.04:0,27,261	0/0:23,0:23:60.08:0,60,572	0/0:24,0:23:51.83:0,52,472	0/0:25,0:25:72.09:0,72,687	0/0:31,0:31:84.13:0,84,811	0/0:14,0:14:30.04:0,30,290	0/0:37,0:37:90.13:0,90,869	0/0:23,0:23:48.06:0,48,463	0/0:24,0:24:69.11:0,69,666	0/0:17,0:17:42.06:0,42,405	1/1:0,21:21:60.18:725,60,0	0/0:17,0:17:48.08:0,48,463	0/0:15,0:15:33.05:0,33,319	0/0:22,0:22:60.09:0,60,579	0/0:19,0:19:45.07:0,45,435	0/0:30,0:30:72.11:0,72,695	0/0:19,0:19:51.08:0,51,492	0/0:15,0:15:36.05:0,36,347	0/0:21,0:21:60.09:0,60,579	0/0:16,0:16:33.03:0,33,313	0/0:18,0:18:51.08:0,51,492	1/1:1,22:23:54.16:652,54,0	1/1:2,23:25:57.17:688,57,0	0/0:22,0:22:63.08:0,63,601	0/0:33,0:33:93.15:0,93,897	0/0:28,0:28:78.12:0,78,752	0/0:11,0:11:27.03:0,27,261
chr10	41339716	.	A	AGT	6147.45	PASS	AB=0.754;AC=37;AF=0.661;AN=56;BaseQRankSum=-2.167;DP=751;FS=2.527;HRun=0;HaplotypeScore=137.2443;InbreedingCoeff=0.4102;MQ=65.20;MQ0=9;MQRankSum=-2.078;QD=10.44;ReadPosRankSum=-1.631;VQSLOD=4.5107;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:11,29:43:27.78:600,0,28	0/0:11,0:12:23.90:0,24,255	1/1:32,0:17:3:25,3,0	0/0:28,0:19:9.36:0,9,77	1/1:7,0:24:2.79:26,3,0	0/0:23,0:23:51.15:0,51,585	0/0:39,0:40:65.96:0,66,712	0/1:30,15:44:34.77:501,0,35	1/1:23,0:23:20.92:184,21,0	1/1:10,0:30:16.76:382,17,0	1/1:6,1:17:9.01:99,9,0	0/0:38,0:39:71.94:0,72,772	0/1:15,0:15:7.05:8,0,7	1/1:13,1:29:9.01:84,9,0	1/1:10,0:28:32.99:289,33,0	1/1:9,0:25:20.91:176,21,0	1/1:13,0:25:17.65:128,18,0	1/1:10,1:29:30.02:302,30,0	0/1:15,11:26:30.02:413,0,30	0/1:8,15:23:60.32:467,0,60	0/1:18,21:39:58.28:512,0,58	1/1:16,0:16:12:110,12,0	0/0:20,0:20:44.96:0,45,496	0/1:30,0:31:4.16:4,0,439	1/1:3,0:25:29.47:250,29,0	1/1:10,15:25:23.63:650,24,0	1/1:7,15:22:35.85:535,36,0	1/1:4,8:14:15.97:402,16,0
chr10	41339742	.	T	TGTGCGC	2023.32	PASS	AB=0.983;AC=18;AF=0.321;AN=56;BaseQRankSum=6.637;DP=665;FS=14.697;HRun=0;HaplotypeScore=181.2544;InbreedingCoeff=0.1050;MQ=55.74;MQ0=8;MQRankSum=-3.752;QD=6.46;ReadPosRankSum=0.790;VQSLOD=1.6237;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:69.92:0,70,749	0/0:16,0:16:39.13:0,39,773	1/1:11,0:2:1.37:22,1,0	0/0:17,0:9:18.26:0,18,131	0/1:24,0:25:42.90:43,0,259	0/0:23,0:23:51.92:0,52,832	0/0:33,0:33:76.86:0,77,1118	0/1:40,0:39:99:112,0,856	1/1:1,13:20:21.03:597,21,0	0/1:22,0:22:99:138,0,154	0/0:16,0:16:8.49:0,8,241	0/0:32,0:32:54.42:0,54,1090	1/1:4,6:16:8.82:141,9,0	0/1:23,0:22:98.49:98,0,127	0/1:24,0:24:57.44:57,0,197	0/1:17,0:19:37.03:322,0,37	0/1:24,0:24:99:187,0,207	0/1:24,0:24:80.70:81,0,150	0/1:18,0:18:34.89:35,0,298	0/0:25,0:26:55.85:0,56,591	0/0:27,0:26:45.38:0,45,433	1/1:4,5:17:11.97:265,12,0	0/0:29,0:29:34.31:0,34,720	0/0:26,0:27:50.99:0,51,724	0/1:28,0:29:99:99,0,327	0/0:25,0:24:12.80:0,13,476	0/0:21,0:21:30.88:0,31,247	0/0:12,0:12:30.68:0,31,208
chr10	41340465	.	ATGTTTTGTT	A	2295.08	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.939;DP=537;FS=4.411;HRun=0;HaplotypeScore=145.3994;InbreedingCoeff=0.9964;MQ=77.53;MQ0=0;MQRankSum=-8.874;QD=48.83;ReadPosRankSum=1.044;VQSLOD=3.0274;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:60.20:0,60,2538	0/0:9,0:9:27.09:0,27,1272	0/0:23,0:21:51.16:0,51,1887	0/0:25,0:25:57.66:0,58,2108	0/0:18,0:18:45.15:0,45,2076	0/0:25,0:25:60.17:0,60,2410	0/0:13,0:13:36.12:0,36,1636	0/0:35,0:35:84.26:0,84,3169	1/1:5,17:22:42.03:1011,42,0	0/0:23,0:23:51.16:0,51,2249	0/0:20,0:20:57.18:0,57,2554	0/0:19,0:19:54.18:0,54,2319	1/1:1,12:13:33.08:876,33,0	0/0:25,0:25:66.23:0,66,2979	0/0:18,0:18:48.16:0,48,2189	0/0:15,0:15:33.11:0,33,1396	0/0:14,0:14:36.12:0,36,1600	0/0:18,0:18:54.19:0,54,2400	0/0:24,0:24:63.20:0,63,2257	0/0:20,0:20:48.16:0,48,1959	0/0:26,0:26:72.22:0,72,2827	1/1:3,9:12:24:551,24,0	0/0:8,0:8:24.08:0,24,1130	0/0:18,0:18:48.16:0,48,2221	0/0:18,0:18:48.14:0,48,1998	0/0:24,0:24:66.19:0,66,2495	0/0:21,0:21:48.16:0,48,2197	0/0:7,0:7:21.07:0,21,719
chr10	41340680	.	ATGTG	A	195.36	PASS	AB=1.000;AC=13;AF=0.342;AN=38;BaseQRankSum=2.514;DP=151;FS=0.000;HRun=0;HaplotypeScore=34.5950;InbreedingCoeff=0.3882;MQ=43.90;MQ0=9;MQRankSum=-0.232;QD=4.54;ReadPosRankSum=0.570;VQSLOD=0.9241;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:11,7:16:2.96:0,3,19	0/0:2,0:2:3.01:0,3,50	./.	./.	0/0:1,0:1:3.01:0,3,71	./.	0/0:5,0:4:0.47:0,0,1	0/0:19,0:15:4.17:0,4,20	0/0:1,0:5:0.89:0,1,2	1/1:5,0:7:6.02:71,6,0	./.	./.	./.	0/0:3,0:3:0:0,0,0	./.	0/0:3,0:3:3.01:0,3,50	0/0:16,0:15:15.01:0,15,202	1/1:11,0:10:3:28,3,0	0/1:5,0:3:14.92:18,0,15	0/0:3,0:3:0:0,0,0	./.	./.	1/1:3,0:4:6.02:72,6,0	1/1:3,0:4:3.01:37,3,0	1/1:5,0:7:6:58,6,0	0/0:8,0:8:16.27:0,16,107	1/1:4,0:4:3:28,3,0	0/0:2,0:2:5.91:0,6,52
chr10	41340720	.	GTGTA	G	557.56	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=0.669;DP=318;FS=1.737;HRun=0;HaplotypeScore=61.8366;InbreedingCoeff=0.3450;MQ=63.19;MQ0=21;MQRankSum=0.344;QD=5.63;ReadPosRankSum=0.364;VQSLOD=1.4327;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:22:32.72:0,33,264	0/0:4,0:4:9:0,9,111	0/0:41,0:15:31.16:0,31,359	0/0:53,0:22:56.50:0,57,498	0/0:4,0:4:11.98:0,12,149	0/0:3,0:3:6.01:0,6,71	0/0:12,0:11:23.91:0,24,230	1/1:17,0:13:35.93:310,36,0	0/0:9,0:9:9.88:0,10,77	0/1:13,0:13:1.75:2,0,138	0/0:8,0:8:17.98:0,18,150	0/0:6,0:6:8.83:0,9,63	0/0:11,0:10:17.78:0,18,133	0/0:4,0:4:0:0,0,0	0/0:5,0:5:14.97:0,15,123	0/0:5,0:5:9:0,9,108	0/0:19,0:18:34.89:0,35,377	0/1:8,0:7:2.55:3,0,30	1/1:5,0:4:7.31:101,7,0	0/0:1,6:7:0:0,0,0	1/1:12,0:12:20.66:169,21,0	0/0:5,0:5:11.95:0,12,92	0/1:4,0:4:7.44:17,0,7	0/1:6,0:6:2.17:2,0,29	0/1:11,0:11:16.76:24,0,17	0/1:9,0:9:25.21:25,0,33	1/1:10,0:10:3.01:47,3,0	0/1:4,0:4:13.02:13,0,14
chr10	41340722	.	GTA	G	616.12	PASS	AB=0.917;AC=14;AF=0.259;AN=54;BaseQRankSum=-0.934;DP=317;FS=0.859;HRun=0;HaplotypeScore=55.1742;InbreedingCoeff=0.5727;MQ=63.76;MQ0=21;MQRankSum=-0.229;QD=7.70;ReadPosRankSum=-1.505;VQSLOD=2.5927;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:22:35.72:0,36,288	0/0:4,0:4:8.60:0,9,85	0/0:41,0:15:31.16:0,31,359	0/0:53,0:22:56.50:0,57,498	0/0:4,0:4:11.98:0,12,124	0/0:4,0:4:8.98:0,9,72	0/0:11,0:11:24.35:0,24,183	1/1:18,0:14:41.94:366,42,0	0/0:11,0:11:15.45:0,15,125	0/0:13,0:13:25.46:0,25,169	0/0:8,0:8:17.76:0,18,150	0/0:6,0:6:8.83:0,9,63	0/0:11,0:10:17.78:0,18,133	./.	0/0:5,0:5:14.97:0,15,123	0/0:5,0:5:8.99:0,9,83	0/0:18,0:17:15.86:0,16,261	0/1:8,0:7:7.53:8,0,36	1/1:1,4:4:11.96:99,12,0	0/1:6,0:6:0:0,0,0	1/1:11,0:11:20.95:170,21,0	0/0:5,0:5:11.95:0,12,95	0/0:5,0:5:10.49:0,10,57	0/0:6,0:6:10.32:0,10,48	0/1:11,0:11:1.45:1,0,21	0/1:4,4:8:15.84:83,0,16	1/1:0,10:10:3:27,3,0	1/1:3,0:3:2.96:20,3,0
chr10	41340892	.	C	CT	1872.46	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=11.431;DP=533;FS=0.000;HRun=8;HaplotypeScore=68.9835;InbreedingCoeff=0.9233;MQ=68.93;MQ0=0;MQRankSum=-0.698;QD=20.13;ReadPosRankSum=-1.062;VQSLOD=3.1294;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,108,982	0/0:8,0:8:18:0,18,165	0/0:17,0:16:3.55:0,4,165	0/0:20,0:19:21:0,21,271	0/0:11,0:11:27.01:0,27,246	1/1:8,11:19:46.37:516,46,0	1/1:1,21:22:51.15:584,51,0	0/0:35,0:35:78:0,78,699	0/0:25,0:25:65.90:0,66,591	0/0:18,0:18:36.01:0,36,329	0/0:11,0:10:23.97:0,24,210	1/1:23,0:23:49.11:350,49,0	0/0:27,0:27:69.02:0,69,631	0/0:22,0:22:57.03:0,57,521	0/0:24,0:25:64.94:0,65,570	0/0:20,0:20:54.02:0,54,491	0/0:26,0:26:75.03:0,75,681	0/0:13,0:13:34.26:0,34,305	0/0:16,0:16:39:0,39,350	0/0:11,0:11:21:0,21,192	0/0:27,0:27:69.02:0,69,625	0/0:5,0:5:6:0,6,55	1/1:9,0:9:23.11:163,23,0	1/1:20,0:20:59.60:434,60,0	0/0:14,0:14:36.01:0,36,329	0/0:24,0:24:66.02:0,66,604	0/0:22,0:22:54.02:0,54,494	0/0:3,0:3:9:0,9,82
chr10	41340901	.	G	GT	946.88	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=4.976;DP=540;FS=8.166;HRun=8;HaplotypeScore=75.7527;InbreedingCoeff=0.9481;MQ=73.58;MQ0=0;MQRankSum=0.289;QD=22.02;ReadPosRankSum=0.478;VQSLOD=3.9018;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,117,1064	0/0:8,0:8:21.01:0,21,191	0/0:22,0:22:44.69:0,45,388	0/0:19,0:19:15.26:0,15,267	0/0:12,0:12:26.94:0,27,246	1/1:3,16:20:39.11:447,39,0	1/1:6,17:23:55.40:622,55,0	0/0:33,0:33:81.03:0,81,741	0/0:26,1:27:31.40:0,31,542	0/0:15,0:15:39.02:0,39,356	0/0:12,0:11:24:0,24,217	0/0:20,0:20:39.38:0,39,219	0/0:26,0:26:72.04:0,72,658	0/0:27,0:27:77.96:0,78,694	0/0:25,1:26:43.42:0,43,651	0/0:18,0:18:48.01:0,48,435	0/0:29,0:29:74.81:0,75,685	0/0:13,0:13:30.01:0,30,274	0/0:14,0:14:33.01:0,33,302	0/0:11,0:11:30.01:0,30,273	0/0:24,0:24:66.03:0,66,604	0/0:6,0:6:15.01:0,15,137	0/0:9,0:9:18.82:0,19,91	0/0:20,0:21:55.13:0,55,262	0/0:14,0:14:39.01:0,39,357	0/0:25,0:25:72.04:0,72,659	0/0:21,0:21:59.97:0,60,539	0/0:3,0:3:9:0,9,82
chr10	41341406	.	A	ATTATTG	6308.69	PASS	AB=0.883;AC=36;AF=0.643;AN=56;BaseQRankSum=-4.962;DP=375;FS=19.295;HRun=0;HaplotypeScore=83.8073;InbreedingCoeff=0.2302;MQ=51.66;MQ0=10;MQRankSum=-0.081;QD=22.29;ReadPosRankSum=-1.964;VQSLOD=2.6523;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:80.86:0,81,1098	0/0:6,0:6:18.04:0,18,360	0/0:29,0:16:34.70:0,35,323	0/0:14,0:10:0.61:0,1,161	1/1:1,20:22:41.08:836,41,0	1/1:2,0:20:12.04:292,12,0	1/1:12,0:12:32.87:296,33,0	1/1:24,0:22:33.07:476,33,0	0/1:4,0:4:6.11:6,0,49	0/1:3,0:11:25.65:26,0,120	0/1:3,0:12:37.44:37,0,94	1/1:10,0:10:23.84:236,24,0	0/1:6,0:6:50:50,0,52	1/1:1,11:13:3.01:107,3,0	0/1:2,0:11:20.38:20,0,126	1/1:0,8:11:12.04:417,12,0	1/1:2,18:21:18.06:602,18,0	0/1:4,0:10:37.69:38,0,79	1/1:13,2:14:27.89:476,28,0	1/1:1,17:21:50.59:926,51,0	1/1:2,7:9:3.01:95,3,0	0/0:2,0:2:3:0,3,25	1/1:8,0:8:20.90:166,21,0	1/1:3,0:3:2.92:17,3,0	0/0:2,0:11:2.27:0,2,116	0/1:1,11:16:6.41:594,0,6	0/1:2,15:17:9.06:389,0,9	1/1:6,0:6:12.02:207,12,0
chr10	41342005	.	G	GA	15889.51	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-4.283;DP=620;FS=3.274;HRun=7;HaplotypeScore=86.0018;InbreedingCoeff=0.9945;MQ=75.35;MQ0=0;MQRankSum=-1.658;QD=29.16;ReadPosRankSum=2.206;VQSLOD=5.3254;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:66.10:0,66,637	0/0:12,0:12:30.05:0,30,290	0/0:24,0:22:15.18:0,15,345	0/0:16,0:12:24:0,24,216	1/1:1,21:22:60.14:707,60,0	1/1:6,19:25:54.17:652,54,0	1/1:0,11:11:33.10:399,33,0	1/1:9,31:40:96.27:1136,96,0	1/1:4,13:17:42.13:507,42,0	1/1:7,15:22:45.14:544,45,0	1/1:3,22:25:63.15:745,63,0	1/1:3,12:15:36.11:435,36,0	1/1:4,15:19:42.13:507,42,0	1/1:1,16:17:45.14:539,45,0	1/1:1,17:18:45.14:544,45,0	1/1:0,19:19:54.17:652,54,0	1/1:3,22:25:63.19:761,63,0	1/1:2,18:20:48.15:580,48,0	1/1:8,16:24:57.02:645,57,0	1/1:2,33:35:70.28:1113,70,0	1/1:2,18:20:42.13:507,42,0	1/1:5,28:33:87.26:1040,87,0	1/1:1,33:34:87.27:1051,87,0	1/1:0,9:9:27.08:326,27,0	1/1:4,20:24:54.17:652,54,0	1/1:6,20:26:57.15:675,57,0	1/1:6,22:28:57.01:666,57,0	1/1:1,16:17:42.13:506,42,0
chr10	41342483	.	C	CT	647.22	PASS	AB=0.875;AC=8;AF=0.143;AN=56;BaseQRankSum=0.029;DP=506;FS=0.000;HRun=10;HaplotypeScore=69.6854;InbreedingCoeff=0.6050;MQ=88.33;MQ0=0;MQRankSum=-2.032;QD=12.45;ReadPosRankSum=-1.732;VQSLOD=3.0207;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,4:31:36.83:0,37,502	0/1:2,1:3:18.63:26,0,19	0/1:16,0:17:23.44:23,0,160	0/0:21,0:23:31.19:0,31,203	0/0:23,0:23:53.92:0,54,443	0/0:25,0:27:57.94:0,58,455	0/0:21,1:22:15.92:0,16,334	0/0:21,0:22:52.96:0,53,424	0/0:17,0:17:44.94:0,45,369	0/0:16,1:17:3.95:0,4,239	0/0:11,0:11:26.95:0,27,222	1/1:2,9:11:2.45:230,2,0	0/0:21,0:21:44.87:0,45,369	0/0:21,0:22:24.15:0,24,349	0/0:27,0:27:68.91:0,69,566	0/0:14,0:14:32.94:0,33,268	0/0:16,0:18:45.96:0,46,351	0/0:17,0:16:29.90:0,30,246	0/0:16,0:16:32.91:0,33,268	0/0:19,0:20:43.46:0,43,350	0/0:16,0:16:41.93:0,42,345	0/0:19,0:19:50.91:0,51,419	1/1:2,8:10:21.05:224,21,0	1/1:1,10:11:27.07:288,27,0	0/0:20,0:20:28.92:0,29,394	0/0:17,0:18:33.46:0,33,355	0/0:28,0:28:62.89:0,63,517	0/0:5,0:5:14.98:0,15,123
chr10	41344373	.	AG	A	9376.88	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=11.003;DP=626;FS=0.963;HRun=2;HaplotypeScore=72.9876;InbreedingCoeff=0.9832;MQ=79.80;MQ0=0;MQRankSum=-7.084;QD=35.65;ReadPosRankSum=2.660;VQSLOD=5.4259;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,108,1571	0/0:11,0:11:30.10:0,30,450	0/0:27,0:27:78.26:0,78,1120	0/0:17,0:16:40:0,40,558	0/0:25,0:25:75.23:0,75,1082	1/1:0,29:29:81.26:1052,81,0	1/1:2,22:24:66.21:857,66,0	1/1:0,26:26:78.21:971,78,0	0/0:20,0:20:60.19:0,60,877	0/0:17,0:17:51.17:0,51,762	0/0:24,0:24:72.24:0,72,1079	1/1:0,18:18:48.16:623,48,0	0/0:18,0:18:51.17:0,51,764	0/0:17,0:17:51.17:0,51,764	0/0:20,0:20:60.20:0,60,898	0/0:22,0:22:66.22:0,66,988	0/0:24,0:24:69.22:0,69,1012	0/0:29,0:29:84.26:0,84,1235	1/1:1,15:16:45.15:584,45,0	1/1:0,21:21:60.20:779,60,0	1/1:1,41:42:99:1480,114,0	0/0:24,0:24:69.23:0,69,1027	1/1:1,19:20:48.16:623,48,0	1/1:0,26:26:75.24:974,75,0	0/0:29,0:29:84.26:0,84,1235	1/1:1,20:21:15.21:693,15,0	1/1:0,17:17:51.17:662,51,0	1/1:0,3:3:6.02:78,6,0
chr10	41344512	.	T	TA	15033.96	PASS	AB=1.000;AC=50;AF=0.893;AN=56;BaseQRankSum=-7.402;DP=521;FS=2.750;HRun=5;HaplotypeScore=49.6533;InbreedingCoeff=0.6235;MQ=75.60;MQ0=0;MQRankSum=-4.007;QD=31.45;ReadPosRankSum=1.342;VQSLOD=5.4158;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:93.18:0,93,974	0/0:11,0:11:30.07:0,30,322	0/1:8,0:8:8.12:8,0,44	0/1:11,0:11:34.54:35,0,64	1/1:0,28:28:84.23:1085,84,0	1/1:0,24:24:66.21:868,66,0	1/1:3,12:15:33.11:434,33,0	1/1:4,23:27:69.15:845,69,0	1/1:1,20:21:51.17:671,51,0	1/1:3,17:20:51.14:655,51,0	1/1:1,36:37:99:1313,105,0	1/1:1,14:15:36.12:474,36,0	1/1:0,22:22:63.20:828,63,0	1/1:0,18:18:48.16:632,48,0	1/1:1,17:18:45.15:592,45,0	1/1:1,14:15:33.02:434,33,0	1/1:1,14:15:27.09:355,27,0	1/1:3,19:22:45.15:592,45,0	1/1:4,13:17:39.10:480,39,0	1/1:5,27:32:78.20:1003,78,0	1/1:2,4:6:12.04:158,12,0	1/1:0,10:10:29.93:350,30,0	1/1:0,16:16:42.61:554,43,0	1/1:1,10:11:24.08:316,24,0	1/1:2,29:31:75.24:986,75,0	1/1:1,16:17:48.15:618,48,0	1/1:1,19:20:51.17:671,51,0	1/1:0,2:2:6.02:79,6,0
chr10	41345569	.	C	CT	9076.40	PASS	AB=0.537;AC=23;AF=0.411;AN=56;BaseQRankSum=-17.605;DP=584;FS=2.261;HRun=5;HaplotypeScore=53.7767;InbreedingCoeff=0.9297;MQ=79.97;MQ0=0;MQRankSum=0.064;QD=34.38;ReadPosRankSum=-0.881;VQSLOD=4.7208;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:48.10:0,48,506	0/0:11,0:11:30.08:0,30,322	0/0:12,0:12:24.03:0,24,243	0/0:16,0:16:36.72:0,37,345	0/0:28,0:28:78.14:0,78,813	1/1:0,20:20:60.20:790,60,0	1/1:2,14:16:42.14:553,42,0	1/1:2,28:30:81.24:1037,81,0	0/0:18,0:18:45.09:0,45,475	0/0:34,0:34:96.24:0,96,1032	0/0:20,0:20:51.13:0,51,548	1/1:1,22:23:63.20:829,63,0	0/0:21,0:21:63.16:0,63,677	0/0:19,0:19:57.14:0,57,613	0/0:26,0:26:75.16:0,75,789	0/0:19,0:19:54.14:0,54,580	0/0:17,0:17:51.13:0,51,548	0/0:14,0:13:42.11:0,42,451	1/1:1,21:22:66.18:837,66,0	1/1:4,31:35:93.30:1224,93,0	1/1:0,13:13:33.11:434,33,0	0/0:24,0:24:63.16:0,63,677	1/1:3,17:20:42.14:553,42,0	1/1:1,15:16:42.14:553,42,0	0/0:24,0:24:69.12:0,69,716	0/1:4,25:29:12.51:886,0,13	1/1:1,27:28:72.23:947,72,0	1/1:0,12:12:33.11:434,33,0
chr10	41346097	.	TTGTGTGTG	T	2086.39	PASS	AB=0.688;AC=11;AF=0.196;AN=56;BaseQRankSum=4.420;DP=702;FS=7.716;HRun=0;HaplotypeScore=186.9644;InbreedingCoeff=0.5803;MQ=62.39;MQ0=12;MQRankSum=-8.234;QD=11.53;ReadPosRankSum=0.250;VQSLOD=2.0517;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:45:12.02:0,12,337	0/0:5,0:5:6.02:0,6,180	0/0:25,0:19:3.01:0,3,62	0/0:22,0:16:5.99:0,6,50	1/1:19,12:34:27.06:477,27,0	0/1:13,0:19:5.27:35,0,5	0/1:13,0:22:7.81:39,0,8	0/0:30,0:30:24.07:0,24,662	0/0:19,0:32:30.07:0,30,544	0/0:13,0:22:37.21:0,37,404	0/0:10,0:15:14.87:0,15,125	0/0:11,0:23:9.96:0,10,178	0/0:15,0:22:18.06:0,18,370	1/1:12,14:26:27.09:660,27,0	0/0:14,0:28:29.96:0,30,270	1/1:10,16:26:27.08:680,27,0	1/1:18,13:31:8.99:171,9,0	0/0:17,0:20:21.27:0,21,374	0/0:24,0:25:12.04:0,12,353	0/0:30,0:32:48.14:0,48,1545	0/0:44,0:45:66.20:0,66,2010	0/0:13,0:25:24.08:0,24,444	0/0:13,0:14:6.02:0,6,201	0/0:19,0:34:8.61:0,9,304	0/1:7,0:22:99:190,0,137	0/0:16,0:16:33.11:0,33,1284	0/0:13,0:15:18.03:0,18,580	0/0:18,0:19:21.02:0,21,661
chr10	41346322	.	CT	C	8694.69	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=14.172;DP=596;FS=3.525;HRun=3;HaplotypeScore=69.0720;InbreedingCoeff=0.9996;MQ=86.62;MQ0=0;MQRankSum=-4.655;QD=34.10;ReadPosRankSum=0.880;VQSLOD=5.4834;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:63.20:0,63,889	0/0:8,0:8:24.08:0,24,344	0/0:26,0:26:69.11:0,69,931	0/0:18,0:18:53.90:0,54,697	0/0:19,0:19:57.18:0,57,799	1/1:0,28:28:72.23:892,72,0	1/1:1,17:18:48.15:595,48,0	1/1:2,30:32:90.26:1091,90,0	0/0:25,0:25:72.21:0,72,997	0/0:16,0:16:48.15:0,48,659	0/0:21,0:21:63.18:0,63,871	1/1:1,25:26:78.14:945,78,0	0/0:30,0:30:73:0,73,1155	0/0:26,0:26:72.20:0,72,1012	0/0:38,0:38:99:0,114,1623	0/0:17,0:17:48.16:0,48,691	0/0:16,0:16:45.15:0,45,645	0/0:12,0:12:33.07:0,33,452	1/1:0,12:12:36.11:446,36,0	1/1:0,27:27:81.19:982,81,0	1/1:0,13:13:39.12:483,39,0	0/0:16,0:16:48.15:0,48,673	1/1:0,20:20:51.03:632,51,0	1/1:0,15:15:42.13:521,42,0	0/0:30,0:30:90.26:0,90,1273	1/1:1,25:26:35.02:881,35,0	1/1:2,21:23:57.18:707,57,0	1/1:0,15:15:42.13:520,42,0
chr10	41347405	.	A	ACTG	13248.16	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=14.153;DP=614;FS=7.371;HRun=0;HaplotypeScore=209.4802;InbreedingCoeff=0.9984;MQ=82.98;MQ0=0;MQRankSum=-6.928;QD=25.88;ReadPosRankSum=4.093;VQSLOD=4.2144;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,144,2660	0/0:11,0:11:33.11:0,33,606	0/0:20,0:20:57.20:0,57,1049	0/0:23,0:23:63.19:0,63,1104	1/1:22,1:23:65.72:611,66,0	1/1:25,0:25:62.84:603,63,0	1/1:20,0:20:59.09:427,59,0	1/1:26,0:26:77.68:653,78,0	1/1:29,0:29:80.74:773,81,0	1/1:27,1:28:82.25:935,82,0	1/1:11,1:11:30.54:262,31,0	1/1:24,0:24:68.73:676,69,0	1/1:22,0:23:68.47:586,68,0	1/1:37,0:37:99:1003,103,0	1/1:28,1:29:81.09:866,81,0	1/1:27,0:27:68.71:652,69,0	1/1:12,0:12:23.98:238,24,0	1/1:14,1:15:35.99:354,36,0	1/1:15,0:14:41.96:465,42,0	1/1:24,0:22:59.77:568,60,0	1/1:14,0:14:23.65:220,24,0	1/1:22,0:22:62.98:672,63,0	1/1:20,0:20:50.35:388,50,0	1/1:27,0:27:71.35:651,71,0	1/1:12,0:12:32.99:329,33,0	1/1:21,0:21:62.98:665,63,0	1/1:12,0:13:35.66:318,36,0	1/1:14,0:14:38.81:334,39,0
chr10	41347408	.	GCA	G	21979.66	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=14.161;DP=605;FS=13.489;HRun=0;HaplotypeScore=161.4185;InbreedingCoeff=0.9989;MQ=83.42;MQ0=0;MQRankSum=-8.439;QD=43.61;ReadPosRankSum=4.279;VQSLOD=4.8296;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,144,2861	0/0:10,0:10:30.10:0,30,595	0/0:19,0:19:54.18:0,54,1049	0/0:24,0:24:66.19:0,66,1235	1/1:0,22:22:66.16:1041,66,0	1/1:0,25:25:57.19:928,57,0	1/1:0,21:21:60.20:975,60,0	1/1:0,24:24:72.25:1170,72,0	1/1:0,29:29:81.28:1305,81,0	1/1:0,29:29:87.14:1303,87,0	1/1:0,11:10:30.10:465,30,0	1/1:1,22:23:66.22:1051,66,0	1/1:2,21:23:66.23:1067,66,0	1/1:0,37:37:99:1678,105,0	1/1:0,29:29:81.21:1286,81,0	1/1:0,27:27:72.17:1141,72,0	1/1:0,12:12:24.08:391,24,0	1/1:0,15:15:39.06:604,39,0	1/1:0,14:13:39.12:610,39,0	1/1:0,24:22:57.19:915,57,0	1/1:0,15:15:35.72:446,36,0	1/1:0,19:19:57.19:927,57,0	1/1:0,20:20:51.15:828,51,0	1/1:0,26:26:69.24:1123,69,0	1/1:0,12:12:33.11:537,33,0	1/1:0,21:21:63.22:1023,63,0	1/1:1,12:13:36.12:579,36,0	1/1:0,13:13:36.12:586,36,0
chr10	41347409	.	C	CT	6954.27	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=14.653;DP=605;FS=12.496;HRun=0;HaplotypeScore=203.5070;InbreedingCoeff=0.9986;MQ=82.82;MQ0=0;MQRankSum=-7.905;QD=13.80;ReadPosRankSum=4.094;VQSLOD=5.2475;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,141,1950	0/0:10,0:10:30.07:0,30,399	0/0:19,0:19:54.17:0,54,737	0/0:23,0:23:63.18:0,63,859	1/1:22,0:22:61.65:316,62,0	1/1:25,0:25:53.73:283,54,0	1/1:21,0:21:53.58:241,54,0	1/1:24,0:24:67.21:316,67,0	1/1:29,0:29:72.41:377,72,0	1/1:29,0:29:78.46:506,78,0	1/1:11,0:10:28.49:181,28,0	1/1:22,1:23:59.20:345,59,0	1/1:21,2:23:61.99:340,62,0	1/1:37,0:37:96.45:509,96,0	1/1:29,0:29:77.95:442,78,0	1/1:27,0:27:67.62:365,68,0	1/1:12,0:12:23.06:129,23,0	1/1:15,0:15:37.23:200,37,0	1/1:14,0:13:37.14:214,37,0	1/1:24,0:22:53.39:272,53,0	1/1:15,0:15:32.51:188,33,0	1/1:19,0:19:53.98:284,54,0	1/1:20,0:20:43.17:202,43,0	1/1:26,0:26:63.60:320,64,0	1/1:12,0:12:31.56:171,32,0	1/1:21,0:21:61.47:397,61,0	1/1:12,1:13:34.28:187,34,0	1/1:13,0:13:33.40:169,33,0
chr10	41347659	.	TCTTCCC	T	4152.39	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=3.700;DP=591;FS=10.878;HRun=0;HaplotypeScore=122.3599;InbreedingCoeff=0.9244;MQ=54.94;MQ0=19;MQRankSum=4.677;QD=23.73;ReadPosRankSum=0.013;VQSLOD=2.6440;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:59.72:0,60,1394	0/0:10,0:10:18.04:0,18,478	0/0:41,0:18:14.93:0,15,205	0/0:30,0:10:11.59:0,12,135	0/0:31,0:31:84.14:0,84,1901	0/0:19,0:16:21:0,21,454	0/0:22,0:21:45.06:0,45,764	1/1:15,20:31:60.10:826,60,0	0/0:17,0:11:33.09:0,33,713	0/0:18,0:17:39.08:0,39,1042	0/0:10,0:10:16.23:0,16,343	0/0:15,0:14:36.11:0,36,715	0/0:16,0:15:35.88:0,36,692	0/0:18,0:16:40.88:0,41,970	0/0:15,0:15:36.05:0,36,668	0/0:25,0:25:69.15:0,69,1676	0/0:18,0:18:47.99:0,48,993	0/0:12,0:8:20.96:0,21,314	1/1:11,15:23:21.10:762,21,0	1/1:6,24:29:53.80:818,54,0	1/1:4,23:26:3.01:65,3,0	0/0:22,0:22:48.09:0,48,1143	0/0:18,0:18:48.07:0,48,906	0/0:16,0:15:12.17:0,12,356	0/0:16,0:15:15.05:0,15,334	1/1:6,21:26:29.16:1007,29,0	1/1:15,0:14:33.03:544,33,0	1/1:0,15:15:6.02:130,6,0
chr10	41347668	.	T	TC	725.90	PASS	AB=0.929;AC=12;AF=0.214;AN=56;BaseQRankSum=8.831;DP=570;FS=4.307;HRun=4;HaplotypeScore=79.8502;InbreedingCoeff=-0.1317;MQ=51.66;MQ0=34;MQRankSum=0.972;QD=3.46;ReadPosRankSum=3.978;VQSLOD=-0.0698;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:22:60.14:0,60,660	0/0:8,0:8:18.03:0,18,193	0/0:52,0:13:18.38:0,18,234	0/0:29,0:5:11.21:0,11,96	0/0:30,0:29:84.22:0,84,941	0/0:15,0:12:6.24:0,6,94	0/0:22,0:20:41.41:0,41,481	0/1:30,0:26:99:175,0,149	0/0:19,0:12:36.09:0,36,397	0/1:14,1:14:2.81:3,0,208	0/1:8,2:9:60.89:61,0,81	0/0:14,0:13:22.62:0,23,224	0/0:17,0:15:39.08:0,39,420	0/0:18,0:16:42.05:0,42,459	0/1:8,5:12:99:186,0,117	0/0:24,0:24:69.20:0,69,782	0/0:18,0:18:48.14:0,48,542	0/1:9,3:8:55.95:130,0,56	0/1:22,0:19:84.67:87,0,85	0/1:28,0:26:71.11:71,0,139	1/1:25,0:24:2.04:6,2,0	0/0:20,0:20:54.04:0,54,573	0/0:20,0:20:38.42:0,38,411	0/0:15,0:14:11.37:0,11,184	0/0:14,1:12:14.74:0,15,127	0/1:24,0:23:32.80:33,0,183	0/1:15,0:15:99:109,0,100	0/1:16,0:16:5.68:6,0,26
chr10	41347681	.	T	TC	573.10	PASS	AB=0.916;AC=12;AF=0.214;AN=56;BaseQRankSum=7.170;DP=591;FS=1.238;HRun=1;HaplotypeScore=78.8227;InbreedingCoeff=0.1312;MQ=47.14;MQ0=83;MQRankSum=-0.807;QD=3.63;ReadPosRankSum=2.613;VQSLOD=0.4303;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:20:51.37:0,51,628	0/0:7,0:6:12.04:0,12,155	0/0:45,0:10:22.30:0,22,275	0/0:22,0:3:8.76:0,9,89	0/0:32,0:30:73.31:0,73,969	0/1:14,0:9:23.61:24,0,40	0/1:23,0:17:11.94:12,0,311	0/0:31,0:25:69.36:0,69,807	0/0:17,0:11:32.54:0,33,377	0/1:8,9:12:13.29:250,0,13	0/1:6,2:7:1.46:56,0,1	0/1:17,0:15:22.70:23,0,145	0/0:17,0:13:26.57:0,27,320	0/0:19,0:17:41.13:0,41,490	1/1:9,3:11:4.41:170,4,0	0/0:27,0:27:69.64:0,70,796	0/0:23,0:17:47.35:0,47,575	0/1:12,2:7:62.46:84,0,62	0/0:28,0:23:59.81:0,60,625	0/0:30,0:26:55.93:0,56,632	0/0:27,0:22:3.01:0,3,37	0/0:20,0:19:55.01:0,55,620	0/1:22,0:19:17.25:17,0,236	0/1:18,0:10:10.37:10,0,150	1/1:11,1:8:6.02:77,6,0	0/0:29,0:26:72.80:0,73,836	0/0:13,0:13:33.09:0,33,429	0/0:20,0:18:17.28:0,17,147
chr10	41347816	.	CCTT	C	314.74	PASS	AB=0.977;AC=14;AF=0.304;AN=46;BaseQRankSum=0.767;DP=401;FS=4.919;HRun=0;HaplotypeScore=40.9056;InbreedingCoeff=0.1107;MQ=22.13;MQ0=191;MQRankSum=-3.045;QD=1.83;ReadPosRankSum=-0.623;VQSLOD=0.7804;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:9:19.24:0,19,318	0/0:14,0:14:38.80:0,39,596	./.	./.	0/0:14,0:7:0.77:0,1,11	0/0:25,0:12:12.13:0,12,107	0/0:14,0:2:0:0,0,0	./.	1/1:14,2:3:7.85:64,8,0	0/0:18,0:7:20.96:0,21,273	./.	0/1:10,0:4:1.14:1,0,40	0/1:12,0:7:2.38:2,0,19	0/1:21,0:9:0.45:0,0,5	0/0:20,0:12:24.92:0,25,320	0/1:14,0:8:20.88:59,0,21	0/1:19,0:3:9.02:30,0,9	0/0:13,0:5:8.94:0,9,105	1/1:3,3:2:6.02:96,6,0	0/0:8,1:2:3.01:0,3,44	0/0:22,0:4:3.01:0,3,44	./.	0/1:15,0:11:10.77:11,0,83	1/1:18,0:3:6.02:77,6,0	0/0:10,0:6:8.71:0,9,74	0/1:22,2:10:76.25:76,0,252	0/1:15,2:6:28.30:28,0,109	0/0:24,0:2:3.01:0,3,44
chr10	41347828	.	CCTT	C	418.98	PASS	AB=0.968;AC=19;AF=0.380;AN=50;BaseQRankSum=0.642;DP=372;FS=0.852;HRun=0;HaplotypeScore=46.5441;InbreedingCoeff=0.2956;MQ=23.55;MQ0=163;MQRankSum=-5.031;QD=2.39;ReadPosRankSum=-4.369;VQSLOD=0.2970;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:9:20.56:0,21,273	0/0:13,0:13:33.11:0,33,529	./.	./.	0/1:14,0:6:4.15:4,0,39	1/1:21,4:13:18.38:170,18,0	1/1:13,0:4:6.63:33,7,0	./.	1/1:14,0:2:3.48:12,3,0	0/0:13,0:6:18.06:0,18,259	0/0:6,0:3:3.01:0,3,39	1/1:10,1:4:8.03:70,8,0	0/0:10,0:5:2.40:0,2,11	0/0:15,0:5:1.55:0,2,4	0/1:17,4:15:31.06:31,0,404	0/1:15,0:7:18.12:48,0,18	0/1:18,0:4:21:21,0,80	0/0:11,0:4:6.02:0,6,88	1/1:6,0:2:2.92:17,3,0	0/0:9,0:1:3.01:0,3,44	0/0:20,0:4:6.02:0,6,87	0/0:16,0:5:3.28:0,3,10	1/1:13,0:11:9.36:95,9,0	1/1:17,0:3:5.23:43,5,0	0/1:8,0:3:31.53:32,0,38	0/0:21,0:8:17.99:0,18,265	0/0:16,0:4:9.03:0,9,132	0/0:19,0:2:3.01:0,3,44
chr10	41347852	.	CCTT	C	3127.12	PASS	AB=0.844;AC=43;AF=0.768;AN=56;BaseQRankSum=4.174;DP=372;FS=10.150;HRun=0;HaplotypeScore=45.9860;InbreedingCoeff=0.3380;MQ=32.85;MQ0=110;MQRankSum=-0.288;QD=9.50;ReadPosRankSum=1.772;VQSLOD=1.4783;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:11:32.92:0,33,400	0/0:11,0:11:28.33:0,28,379	0/0:8,0:2:3.01:0,3,44	0/0:6,0:3:4.28:0,4,21	1/1:6,7:6:6.02:102,6,0	1/1:5,10:8:6.02:80,6,0	1/1:5,5:4:9.03:142,9,0	0/1:13,2:6:46.26:46,0,122	1/1:12,1:4:9.03:131,9,0	0/1:11,3:9:26.65:118,0,27	1/1:2,8:9:6.01:57,6,0	1/1:7,4:4:12.03:176,12,0	0/1:8,0:5:1.03:74,0,1	1/1:4,12:9:6.02:89,6,0	1/1:20,0:14:32.19:285,32,0	1/1:3,11:7:9.01:125,9,0	1/1:10,6:6:12.04:203,12,0	1/1:10,0:4:5.80:43,6,0	0/1:3,2:4:47.52:48,0,58	0/1:9,3:6:1.27:91,0,1	1/1:19,3:10:23.31:197,23,0	1/1:16,0:9:20.82:198,21,0	1/1:9,10:16:30.81:425,31,0	1/1:15,2:6:3.19:47,3,0	1/1:4,4:4:11.82:108,12,0	1/1:20,0:10:29.39:258,29,0	1/1:15,0:7:17.77:187,18,0	1/1:10,0:2:6:54,6,0
chr10	41347932	.	CT	C	2682.09	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=11.203;DP=506;FS=16.944;HRun=2;HaplotypeScore=63.0733;InbreedingCoeff=0.9883;MQ=52.93;MQ0=3;MQRankSum=2.073;QD=30.83;ReadPosRankSum=1.811;VQSLOD=1.9849;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:63.14:0,63,874	0/0:10,0:10:30.10:0,30,450	0/0:30,0:12:28.16:0,28,362	0/0:31,0:11:29.93:0,30,398	0/0:30,0:30:90.29:0,90,1322	1/1:0,18:18:48.16:620,48,0	1/1:1,15:16:42.09:526,42,0	0/0:18,0:18:48.14:0,48,679	0/0:13,0:11:33.07:0,33,434	0/0:17,0:17:51.17:0,51,759	0/0:12,0:12:36.12:0,36,539	1/1:0,14:12:33.11:428,33,0	0/0:16,0:15:45.14:0,45,650	0/0:15,0:14:27.08:0,27,384	0/0:18,0:15:39.12:0,39,559	0/0:20,0:19:54.18:0,54,809	0/0:24,0:24:63.19:0,63,918	0/0:17,0:17:42.14:0,42,629	0/0:5,0:4:12.01:0,12,139	0/0:20,0:20:60.17:0,60,843	0/0:14,0:14:42.14:0,42,629	0/0:21,0:21:63.21:0,63,944	1/1:1,14:15:39.13:506,39,0	1/1:1,23:24:60.20:778,60,0	0/0:16,0:16:48.16:0,48,715	0/0:28,0:26:78.25:0,78,1120	0/0:16,0:16:48.16:0,48,705	0/0:5,0:5:15.05:0,15,224
chr10	41349219	.	TTGTG	T	781.02	PASS	AB=1.000;AC=10;AF=0.192;AN=52;BaseQRankSum=0.880;DP=577;FS=6.405;HRun=0;HaplotypeScore=122.9537;InbreedingCoeff=0.3348;MQ=54.85;MQ0=10;MQRankSum=0.691;QD=5.21;ReadPosRankSum=2.236;VQSLOD=2.1259;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:32:14.10:0,14,92	0/0:12,0:11:18.06:0,18,427	./.	0/0:26,0:21:3.01:0,3,59	0/0:18,0:18:9.48:0,9,137	0/0:13,0:13:6.46:0,6,50	0/0:19,0:19:2.98:0,3,49	0/0:24,0:23:28.04:0,28,314	1/1:4,11:15:26.69:339,27,0	0/1:29,0:29:83.42:83,0,164	./.	0/1:20,0:20:31.89:42,0,32	1/1:9,11:20:11.39:171,11,0	0/0:15,0:15:7.27:0,7,136	0/1:21,0:21:27.95:28,0,44	0/0:6,0:21:6.02:0,6,103	0/0:24,0:26:37.04:0,37,445	0/0:25,0:23:6.46:0,6,58	0/0:18,0:18:13.16:0,13,177	0/0:16,0:22:12.60:0,13,396	0/0:19,0:17:16.22:0,16,181	1/1:17,2:20:25.78:258,26,0	0/0:21,0:20:8.99:0,9,74	0/1:25,0:25:11.77:12,0,122	0/0:23,0:22:6.02:0,6,94	0/0:26,0:27:42.86:0,43,580	0/0:24,0:24:13.20:0,13,479	0/0:6,0:7:9.50:0,10,178
chr10	41349240	.	TGTGTGTGTGTGTGTGTGAGA	T	675.08	PASS	AB=0.948;AC=4;AF=0.074;AN=54;BaseQRankSum=-0.627;DP=637;FS=2.491;HRun=0;HaplotypeScore=255.4752;InbreedingCoeff=0.4118;MQ=48.75;MQ0=20;MQRankSum=-1.995;QD=11.44;ReadPosRankSum=-1.809;VQSLOD=2.4805;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:48.16:0,48,2531	0/0:13,0:12:24.01:0,24,1629	0/0:29,0:8:14.64:0,15,298	0/0:44,0:14:7.32:0,7,75	0/0:17,0:17:15.82:0,16,1026	0/1:12,0:12:13.87:14,0,111	0/0:27,0:27:3.90:0,4,39	0/0:28,0:27:43.86:0,44,903	0/0:20,0:19:25.41:0,25,1346	0/0:28,0:28:32.56:0,33,1609	0/0:23,0:23:5.58:0,6,31	1/1:6,15:20:9.03:370,9,0	0/0:20,0:20:21.54:0,22,748	0/0:14,0:13:18.03:0,18,655	0/0:20,0:20:9.02:0,9,365	0/0:21,0:21:12:0,12,464	0/0:30,0:30:46.09:0,46,2328	0/0:22,0:19:11.91:0,12,555	0/0:15,0:14:13.28:0,13,686	0/0:25,0:25:45.04:0,45,2370	0/0:23,0:20:29.54:0,30,1341	0/0:20,0:20:40.49:0,40,1724	./.	0/1:23,3:26:0.73:396,0,1	0/0:23,0:22:3.01:0,3,232	0/0:29,0:29:48.12:0,48,2627	0/0:21,0:20:39.12:0,39,2087	0/0:9,0:8:17.27:0,17,843
chr10	41349248	.	TGTGTGTGTGAGA	T	1231.16	PASS	AB=1.000;AC=19;AF=0.352;AN=54;BaseQRankSum=-3.166;DP=644;FS=0.000;HRun=0;HaplotypeScore=186.8706;InbreedingCoeff=0.0377;MQ=48.10;MQ0=23;MQRankSum=-1.257;QD=3.63;ReadPosRankSum=-5.731;VQSLOD=0.7850;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:65.89:0,66,1770	0/0:12,0:11:26.12:0,26,986	0/0:36,0:9:10.18:0,10,248	0/1:44,0:10:19.84:20,0,37	0/1:15,0:15:37.24:37,0,423	1/1:12,0:12:27.54:404,28,0	1/1:3,23:26:6.02:96,6,0	0/1:27,0:25:9.58:10,0,263	0/1:20,0:19:23.87:24,0,426	0/1:7,0:26:41.55:42,0,731	0/1:3,0:19:11.93:27,0,12	1/1:22,0:21:11.98:224,12,0	0/0:17,0:17:9.38:0,9,203	0/1:15,0:14:5.38:5,0,295	0/1:5,0:23:58.85:59,0,124	0/0:22,0:22:6.48:0,6,235	0/1:32,0:32:34.42:34,0,1020	0/0:7,0:21:7.33:0,7,256	0/0:14,0:12:5.53:0,6,355	0/0:27,0:27:37.28:0,37,1118	0/0:25,0:22:16.76:0,17,538	0/1:22,0:22:19.11:19,0,351	./.	1/1:28,0:28:23.54:382,24,0	0/0:3,0:26:3.01:0,3,132	0/0:26,0:26:30.06:0,30,1243	0/0:20,0:19:11.18:0,11,986	0/1:8,0:7:18.79:19,0,410
chr10	41349252	.	TGTGTGA	T	1281.94	PASS	AB=0.987;AC=17;AF=0.304;AN=56;BaseQRankSum=1.287;DP=635;FS=7.019;HRun=0;HaplotypeScore=144.2674;InbreedingCoeff=-0.2741;MQ=47.72;MQ0=24;MQRankSum=-0.700;QD=3.49;ReadPosRankSum=-0.268;VQSLOD=2.2224;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:68.76:0,69,790	0/0:13,0:12:29.09:0,29,625	0/1:37,0:7:10.92:11,0,96	0/1:45,0:10:11.67:12,0,37	0/1:15,0:15:17.22:17,0,235	1/1:13,0:13:23.95:195,24,0	0/1:26,0:26:16.28:27,0,16	0/0:24,0:22:3.54:0,4,261	0/1:18,2:19:18.45:238,0,18	0/1:19,0:19:96.88:97,0,212	0/1:17,1:18:12.05:15,0,12	0/1:22,0:21:12.68:82,0,13	0/1:18,1:19:99:105,0,113	0/0:14,0:13:12.78:0,13,310	0/1:24,0:24:36.24:114,0,36	0/0:21,0:21:20.92:0,21,253	0/0:32,0:32:6.03:0,6,627	0/1:22,0:19:16.48:16,0,65	0/0:13,0:11:7.22:0,7,279	0/0:26,0:26:17.23:0,17,562	0/0:25,0:23:42.67:0,43,501	0/1:22,0:22:56.31:312,0,56	0/0:15,0:14:8.99:0,9,74	0/1:28,0:28:58.43:173,0,58	0/1:27,0:26:15.94:16,0,61	0/0:24,0:24:47.19:0,47,745	0/0:21,0:20:26.20:0,26,644	0/1:10,0:9:12.55:13,0,309
chr10	41352050	.	A	ATCT	10922.16	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-11.555;DP=681;FS=3.342;HRun=0;HaplotypeScore=91.5063;InbreedingCoeff=0.9939;MQ=87.37;MQ0=0;MQRankSum=-5.704;QD=53.28;ReadPosRankSum=4.143;VQSLOD=6.9245;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,117,1884	0/0:14,0:14:42.13:0,42,674	0/0:21,0:21:54:0,54,798	0/0:28,0:28:69.29:0,69,1052	0/0:23,0:22:60.19:0,60,967	1/1:0,15:15:36.12:815,36,0	1/1:1,20:21:45.15:1015,45,0	0/0:42,0:41:99:0,117,1857	0/0:24,0:24:66.20:0,66,1045	1/1:4,20:25:66.19:1384,66,0	1/1:1,11:12:24.08:541,24,0	1/1:0,18:18:42.14:947,42,0	0/0:22,0:22:66.19:0,66,1046	0/0:17,0:17:51.17:0,51,848	1/1:0,20:21:48.16:1088,48,0	0/0:19,0:19:54.18:0,54,899	0/0:31,0:31:90.23:0,90,1387	1/1:0,7:7:18.06:407,18,0	0/0:17,0:17:51.15:0,51,802	0/0:37,0:37:99:0,99,1623	0/0:50,0:50:99:0,144,2313	0/0:25,0:25:63.18:0,63,997	1/1:2,27:29:66.05:1475,66,0	1/1:1,28:29:63.22:1427,63,0	1/1:0,27:28:81.28:1822,81,0	0/0:23,0:23:66.20:0,66,1030	0/0:37,0:37:99:0,111,1692	0/0:5,0:5:12.04:0,12,200
chr10	41353664	.	G	GACACAC	988.81	PASS	AB=0.616;AC=13;AF=0.241;AN=54;BaseQRankSum=2.716;DP=568;FS=2.622;HRun=0;HaplotypeScore=139.5026;InbreedingCoeff=0.4809;MQ=59.89;MQ0=17;MQRankSum=-3.878;QD=6.42;ReadPosRankSum=-3.181;VQSLOD=1.9070;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:36:81:0,81,1442	0/0:3,0:3:3.01:0,3,63	./.	0/0:27,0:12:4.01:0,4,41	0/0:23,0:23:63.15:0,63,1187	0/1:1,0:30:20.78:419,0,21	1/1:1,0:17:4.46:107,4,0	0/1:17,0:32:54.49:82,0,54	0/0:18,0:18:48.13:0,48,883	0/0:33,0:33:48.28:0,48,904	0/0:19,0:19:33.07:0,33,467	1/1:0,1:16:12.04:307,12,0	0/0:8,0:10:24.08:0,24,459	0/0:18,0:18:54.13:0,54,941	0/0:15,0:15:33.10:0,33,518	0/0:14,0:14:39.11:0,39,741	0/0:13,0:16:30.10:0,30,566	0/0:23,0:23:16.14:0,16,509	1/1:7,0:14:6.67:56,7,0	0/0:5,0:16:10.98:0,11,66	0/0:8,0:28:10.63:0,11,19	0/0:17,0:19:48.11:0,48,850	1/1:2,0:20:3.01:78,3,0	1/1:0,4:14:2.82:77,3,0	0/0:26,0:26:59.68:0,60,863	0/1:5,0:10:16.93:17,0,82	0/0:4,0:20:13.40:0,13,82	0/0:3,0:13:11.87:0,12,79
chr10	41356757	.	TTCTC	T	3856.07	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=9.083;DP=638;FS=0.911;HRun=0;HaplotypeScore=123.4257;InbreedingCoeff=0.9967;MQ=67.49;MQ0=2;MQRankSum=-3.066;QD=38.95;ReadPosRankSum=2.538;VQSLOD=3.9737;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:63.16:0,63,1389	0/0:6,0:6:18.05:0,18,389	0/0:19,0:13:22.39:0,22,648	0/0:34,0:24:32.70:0,33,728	1/1:1,27:28:77.84:1063,78,0	0/0:17,0:17:48.15:0,48,1161	0/0:22,0:22:63.16:0,63,1283	0/0:32,0:32:87.19:0,87,1851	0/0:17,0:17:36.09:0,36,828	0/0:27,0:27:72.24:0,72,1719	0/0:25,0:25:69.22:0,69,1648	0/0:19,0:19:51.18:0,51,1298	0/0:23,0:23:66.21:0,66,1617	1/1:0,16:16:32.85:548,33,0	0/0:29,0:29:78.17:0,78,1820	1/1:2,30:32:75.15:1347,75,0	1/1:0,23:23:54.10:898,54,0	0/0:19,0:19:51.17:0,51,1261	0/0:29,0:29:72.20:0,72,1634	0/0:29,0:29:81.22:0,81,1889	0/0:24,0:24:63.17:0,63,1387	0/0:23,0:23:63.20:0,63,1455	0/0:22,0:22:57.16:0,57,1363	0/0:20,0:20:57.20:0,57,1464	0/0:15,0:15:45.11:0,45,1006	0/0:21,0:21:60.20:0,60,1476	0/0:26,0:26:69.21:0,69,1606	0/0:13,0:13:39.08:0,39,924
chr10	41356808	.	CTCTCTCTCTG	C	2614.29	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.277;DP=767;FS=0.669;HRun=0;HaplotypeScore=229.5708;InbreedingCoeff=0.9301;MQ=64.13;MQ0=16;MQRankSum=-8.329;QD=35.33;ReadPosRankSum=3.571;VQSLOD=3.1333;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:69.21:0,69,2425	0/0:12,0:12:33.11:0,33,1504	0/0:47,0:20:15.29:0,15,437	0/0:69,0:27:2.48:0,2,277	0/0:36,0:36:69.21:0,69,2900	0/0:22,0:22:48.16:0,48,1975	0/0:25,0:25:60.19:0,60,2183	0/0:33,0:33:64.45:0,64,2063	1/1:6,17:23:33.11:994,33,0	0/0:34,0:34:78.26:0,78,3157	0/0:30,0:29:57.20:0,57,2133	0/0:28,0:28:63.22:0,63,2482	1/1:9,15:24:39.12:1047,39,0	0/0:18,0:18:42.13:0,42,1806	0/0:29,0:29:69.24:0,69,2668	0/0:25,0:25:48.15:0,48,1780	0/0:24,0:24:45.13:0,45,1931	0/0:19,0:19:45.15:0,45,1757	0/0:20,0:19:33.10:0,33,1083	0/0:36,0:36:87.30:0,87,3306	0/0:16,0:16:42.14:0,42,1675	1/1:7,20:27:24.08:715,24,0	0/0:21,0:21:45.15:0,45,1923	0/0:24,0:24:60.19:0,60,2569	0/0:19,0:19:48.16:0,48,1991	0/0:31,0:31:84.29:0,84,3272	0/0:30,0:30:66.23:0,66,2796	0/0:14,0:14:36.12:0,36,1597
chr10	41357857	.	A	AT	5124.84	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-12.835;DP=704;FS=0.366;HRun=2;HaplotypeScore=64.2077;InbreedingCoeff=0.9928;MQ=87.41;MQ0=0;MQRankSum=0.406;QD=38.25;ReadPosRankSum=2.548;VQSLOD=5.4384;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:48.15:0,48,595	0/0:12,0:12:33.10:0,33,409	0/0:27,0:27:72.22:0,72,880	0/0:25,0:25:62.50:0,63,756	0/0:35,0:35:99:0,99,1188	0/0:23,0:23:66.19:0,66,802	0/0:20,0:20:57.16:0,57,693	0/0:34,0:34:84.26:0,84,1032	0/0:18,0:18:54.15:0,54,656	1/1:1,33:34:99:1426,99,0	1/1:0,35:35:99:1402,99,0	0/0:24,0:24:66.21:0,66,818	0/0:32,0:32:90.28:0,90,1115	0/0:30,0:30:90.28:0,90,1116	1/1:0,16:16:48.16:691,48,0	0/0:29,0:29:87.27:0,87,1079	0/0:19,0:19:54.17:0,54,669	1/1:3,12:15:35.33:482,35,0	0/0:23,0:23:60.19:0,60,744	0/0:34,0:34:99:0,102,1252	0/0:31,0:31:84.23:0,84,1015	0/0:22,0:22:63.17:0,63,757	0/0:26,0:26:72.23:0,72,892	0/0:19,0:19:57.18:0,57,705	1/1:3,31:34:78.26:1123,78,0	0/0:25,0:25:72.21:0,72,880	0/0:41,0:40:99:0,117,1436	0/0:4,0:4:12.04:0,12,149
chr10	41360331	.	ATCTG	A	1990.92	PASS	AB=0.871;AC=21;AF=0.389;AN=54;BaseQRankSum=0.123;DP=617;FS=2.594;HRun=0;HaplotypeScore=162.1221;InbreedingCoeff=0.6731;MQ=57.53;MQ0=3;MQRankSum=-2.237;QD=7.06;ReadPosRankSum=-0.376;VQSLOD=2.6317;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:14:2.99:0,3,23	0/0:16,0:16:39.08:0,39,789	0/0:24,0:19:11.68:0,12,207	0/0:16,0:13:5.14:0,5,97	0/0:38,0:37:60.14:0,60,1213	1/1:29,0:29:5.34:56,5,0	1/1:21,0:21:5.09:33,5,0	1/1:32,20:51:57.30:593,57,0	0/1:21,0:21:0.60:1,0,9	0/0:22,0:22:44.80:0,45,643	0/0:12,0:12:5.99:0,6,50	1/1:23,0:23:12.01:112,12,0	0/0:27,0:27:11.03:0,11,136	0/0:20,0:20:33.08:0,33,675	0/0:25,0:24:11.67:0,12,122	0/0:37,0:37:66.18:0,66,1349	0/0:18,0:18:23.76:0,24,571	0/0:5,0:5:5.99:0,6,65	1/1:22,2:20:29.87:391,30,0	1/1:16,4:20:14.61:150,15,0	1/1:15,0:15:12.01:140,12,0	0/0:21,0:21:14.99:0,15,130	1/1:22,0:22:0.62:24,1,0	./.	0/0:19,0:19:12.01:0,12,191	1/1:16,5:21:35.54:395,36,0	0/1:16,7:23:6.19:206,0,6	0/1:9,2:11:1.25:75,0,1
chr10	41360349	.	CTGTCTGTCTG	C	633.52	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=3.599;DP=601;FS=27.996;HRun=0;HaplotypeScore=216.9682;InbreedingCoeff=0.8558;MQ=51.26;MQ0=5;MQRankSum=-1.885;QD=5.32;ReadPosRankSum=-1.950;VQSLOD=0.8646;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:9.03:0,9,202	0/0:18,0:18:54.18:0,54,2102	0/0:18,0:12:20.32:0,20,595	0/0:12,0:8:18.05:0,18,454	0/0:39,0:38:85.24:0,85,3152	1/1:6,1:30:12.71:123,13,0	1/1:6,1:20:11.39:78,11,0	0/0:35,0:34:99:0,99,1420	0/0:22,0:21:9.12:0,9,64	0/0:25,0:24:43.88:0,44,1874	0/0:13,0:12:15.04:0,15,315	1/1:0,20:20:12.02:406,12,0	0/0:27,0:27:25.14:0,25,493	0/0:16,0:16:36.11:0,36,1512	0/0:26,0:25:14.67:0,15,471	0/0:38,0:38:72.37:0,72,3229	0/0:16,0:16:28.75:0,29,1184	0/0:6,0:6:12.91:0,13,284	0/0:27,0:23:63.96:0,64,932	0/0:21,0:21:27.51:0,28,436	0/0:12,0:13:11.94:0,12,178	0/0:25,0:25:28.74:0,29,523	1/1:2,26:28:6.58:146,7,0	1/1:8,13:20:3.01:33,3,0	0/0:16,0:16:15.04:0,15,591	0/0:23,0:23:50.46:0,50,916	0/0:21,0:21:30.55:0,31,517	0/0:12,0:12:17.67:0,18,246
chr10	41360351	.	G	GTCTC	749.58	PASS	AB=0.994;AC=10;AF=0.179;AN=56;BaseQRankSum=4.942;DP=619;FS=12.689;HRun=0;HaplotypeScore=185.6596;InbreedingCoeff=0.3586;MQ=50.95;MQ0=5;MQRankSum=-3.965;QD=4.54;ReadPosRankSum=0.460;VQSLOD=2.0207;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:8.97:0,9,71	0/0:18,0:18:53.31:0,53,800	0/0:17,0:11:17.63:0,18,229	0/0:13,0:9:14.73:0,15,168	0/0:38,0:37:71.78:0,72,915	0/0:30,0:30:18.22:0,18,136	0/0:19,0:19:6.92:0,7,58	0/0:33,0:32:70.61:0,71,580	1/1:4,20:27:3:70,3,0	0/0:25,0:24:3.82:0,4,436	0/0:12,0:11:12:0,12,120	0/1:20,0:20:2.53:3,0,71	1/1:1,29:32:21.05:473,21,0	0/0:17,0:17:32.96:0,33,380	0/0:25,0:24:15:0,15,169	0/1:37,1:38:6.31:6,0,693	0/0:16,0:16:23.24:0,23,208	0/1:6,0:6:7.01:7,0,80	0/0:28,0:24:28.83:0,29,588	0/0:23,0:22:21.37:0,21,239	0/0:14,0:14:12.02:0,12,144	1/1:17,1:29:26.53:258,27,0	0/0:28,0:28:9.31:0,9,76	0/0:21,0:20:2.99:0,3,23	0/0:16,0:16:6.02:0,6,99	0/0:24,0:24:4.44:0,4,529	0/0:22,0:22:3.13:0,3,214	0/1:12,0:12:73.92:74,0,74
chr10	41360353	.	CTGTCTG	C	627.52	PASS	AB=0.980;AC=12;AF=0.214;AN=56;BaseQRankSum=3.543;DP=619;FS=9.939;HRun=0;HaplotypeScore=194.0424;InbreedingCoeff=0.6448;MQ=50.56;MQ0=5;MQRankSum=-1.891;QD=4.18;ReadPosRankSum=-1.298;VQSLOD=1.5294;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:15.03:0,15,207	0/0:19,0:19:57.18:0,57,1504	0/0:16,0:10:18.10:0,18,371	0/0:15,0:9:19.76:0,20,305	0/0:38,0:37:64.76:0,65,1982	1/1:26,4:30:14.19:263,14,0	1/1:17,2:19:10.44:120,10,0	0/0:31,0:29:39.94:0,40,383	0/0:28,0:27:8.31:0,8,31	0/0:25,0:24:35.22:0,35,1145	0/0:12,0:11:12.01:0,12,147	1/1:20,0:20:12.04:209,12,0	0/0:33,0:33:3.48:0,3,229	0/0:17,0:17:33.11:0,33,1000	0/0:25,0:24:14.85:0,15,287	0/0:37,0:37:67.63:0,68,2124	0/0:16,0:16:28.93:0,29,807	0/1:7,0:7:0.65:1,0,141	0/0:29,0:25:27.35:0,27,337	0/0:21,0:20:12.81:0,13,98	0/0:13,0:14:2.87:0,3,15	0/0:29,0:29:12.05:0,12,207	1/1:29,0:29:9.58:121,10,0	1/1:21,0:20:3.01:33,3,0	0/0:15,0:15:12.04:0,12,346	0/1:23,1:24:40.22:40,0,251	0/0:21,0:21:17.46:0,17,120	0/0:12,0:12:8.09:0,8,98
chr10	41360357	.	CTG	C	1397.80	PASS	AB=0.990;AC=22;AF=0.393;AN=56;BaseQRankSum=3.096;DP=629;FS=2.872;HRun=0;HaplotypeScore=170.5156;InbreedingCoeff=0.3530;MQ=49.13;MQ0=6;MQRankSum=-0.863;QD=4.01;ReadPosRankSum=0.265;VQSLOD=2.7119;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:12:0,12,154	0/0:18,0:18:40.77:0,41,828	0/0:15,0:8:15.42:0,15,191	0/0:17,0:10:19.19:0,19,210	0/0:39,0:38:59.29:0,59,949	1/1:32,0:32:15.44:119,15,0	1/1:20,0:20:11.19:73,11,0	0/1:32,0:28:70.85:226,0,71	0/0:28,0:27:8.18:0,8,28	0/0:24,0:23:32:0,32,478	0/0:11,0:10:5.99:0,6,50	1/1:20,0:20:11.97:95,12,0	0/1:33,0:33:21.20:21,0,69	0/0:17,0:17:33.08:0,33,535	0/0:24,0:23:11.65:0,12,98	0/0:41,0:41:43.98:0,44,1008	0/0:16,0:16:26.12:0,26,435	0/1:5,0:5:3.66:4,0,36	0/1:27,1:25:99:170,0,119	1/1:20,1:20:14.59:139,15,0	1/1:14,1:14:11.95:116,12,0	0/1:31,0:31:22.65:23,0,68	1/1:31,0:31:17.59:145,18,0	1/1:21,0:20:3.01:33,3,0	0/0:15,0:15:12.01:0,12,141	0/1:28,0:28:35.14:247,0,35	0/1:19,1:20:6.31:109,0,6	0/1:12,0:12:14.54:69,0,15
chr10	41360359	.	G	GTCTCTCTC	2086.36	PASS	AB=0.946;AC=19;AF=0.352;AN=54;BaseQRankSum=0.440;DP=626;FS=8.860;HRun=0;HaplotypeScore=211.8286;InbreedingCoeff=0.3308;MQ=48.85;MQ0=6;MQRankSum=0.348;QD=7.17;ReadPosRankSum=-0.586;VQSLOD=1.6869;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:4.76:0,5,130	0/0:17,0:18:51.17:0,51,1144	0/0:16,0:7:9.49:0,9,115	0/0:18,0:10:13.04:0,13,101	0/0:38,0:37:47.60:0,48,699	0/1:33,0:33:55.17:68,0,55	1/1:20,0:20:2.79:24,3,0	0/0:32,0:28:60.79:0,61,646	1/1:29,0:28:5.65:119,6,0	0/1:22,1:23:99:726,0,197	./.	0/0:20,0:20:12:0,12,179	1/1:33,0:33:30.56:444,31,0	0/0:18,0:18:26.96:0,27,377	0/1:13,10:22:0:0,0,0	0/0:42,0:42:17.76:0,18,739	0/0:15,0:15:23.80:0,24,206	1/1:4,0:4:3.01:39,3,0	0/0:26,0:24:28.53:0,29,859	0/0:20,0:19:5.74:0,6,78	0/0:15,0:14:6.36:0,6,118	1/1:29,0:29:32.28:452,32,0	0/0:31,0:31:15.29:0,15,168	0/1:21,0:20:18.94:46,0,19	1/1:14,0:15:5.94:199,6,0	0/1:28,0:28:39.15:39,0,539	0/1:20,0:20:6.85:7,0,247	0/1:12,0:12:29.68:93,0,30
chr10	41360367	.	C	CTGTGTGTGTGTGTG	3835.73	PASS	AB=0.965;AC=11;AF=0.204;AN=54;BaseQRankSum=1.349;DP=642;FS=1.818;HRun=0;HaplotypeScore=245.8567;InbreedingCoeff=0.1748;MQ=50.43;MQ0=7;MQRankSum=-4.565;QD=18.09;ReadPosRankSum=-2.361;VQSLOD=2.4675;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:14,0:14:2.50:3,0,362	0/0:19,0:19:54.19:0,54,2019	0/0:27,0:10:16.89:0,17,499	0/0:23,0:15:29.13:0,29,698	0/0:37,0:36:54.17:0,54,1174	0/0:34,0:34:29.61:0,30,875	0/0:20,0:20:15.04:0,15,364	0/1:38,0:34:99:172,0,254	0/0:28,0:27:5.86:0,6,171	0/1:23,0:21:99:535,0,381	./.	0/1:20,0:20:1.69:2,0,59	0/0:32,0:32:36.16:0,36,742	0/0:20,0:20:27.09:0,27,687	0/0:20,0:19:3:0,3,25	0/0:42,0:42:68.45:0,68,1568	0/0:16,0:16:24.08:0,24,586	0/0:3,0:3:5.98:0,6,89	0/1:26,0:25:99:479,0,186	0/1:18,0:17:0.34:19,0,0	0/1:14,0:13:0.98:19,0,1	0/0:30,0:30:36.02:0,36,1177	0/0:34,0:34:27.40:0,27,857	0/0:24,0:23:5.52:0,6,143	0/0:14,0:14:5.79:0,6,130	0/1:27,0:27:69.23:1395,0,69	0/1:12,7:22:0.43:335,0,0	1/1:3,3:10:18.06:877,18,0
chr10	41360371	.	C	CTGTG	5568.10	PASS	AB=0.949;AC=37;AF=0.685;AN=54;BaseQRankSum=2.393;DP=651;FS=4.539;HRun=0;HaplotypeScore=189.5551;InbreedingCoeff=0.4656;MQ=49.32;MQ0=8;MQRankSum=-4.109;QD=10.79;ReadPosRankSum=1.801;VQSLOD=4.4172;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:15.03:0,15,220	0/0:18,0:18:42.14:0,42,684	0/0:30,0:12:20.87:0,21,242	0/1:27,0:17:4.92:5,0,230	1/1:8,27:37:29.76:637,30,0	0/1:27,0:31:5.79:105,0,6	1/1:15,0:18:10.21:42,10,0	1/1:41,0:38:33.01:476,33,0	0/1:27,0:26:24.21:24,0,63	1/1:24,0:22:41.87:321,42,0	./.	0/0:17,0:17:8.89:0,9,59	0/1:31,0:31:99:193,0,152	1/1:3,15:20:18.06:445,18,0	0/0:20,0:19:0:0,0,0	1/1:8,32:42:47.47:1012,47,0	1/1:1,17:19:23.49:527,23,0	1/1:4,0:4:5.97:75,6,0	1/1:32,0:32:47.44:426,47,0	1/1:9,0:17:2.97:21,3,0	1/1:14,0:13:5.95:59,6,0	0/0:30,0:30:36.05:0,36,302	0/1:26,0:31:5.65:46,0,6	1/1:18,0:20:2.74:13,3,0	1/1:15,0:15:4.51:15,5,0	1/1:17,0:30:55.60:591,56,0	1/1:25,0:25:29.52:312,30,0	1/1:7,0:7:18.01:226,18,0
chr10	41360392	.	GCA	G	77.73	PASS	AB=0.822;AC=4;AF=0.071;AN=56;BaseQRankSum=5.052;DP=617;FS=34.323;HRun=0;HaplotypeScore=160.1149;InbreedingCoeff=-0.0870;MQ=67.69;MQ0=5;MQRankSum=-5.711;QD=1.14;ReadPosRankSum=-1.651;VQSLOD=1.2655;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:22:45.61:0,46,870	0/0:17,0:17:51.16:0,51,987	0/0:43,0:28:81.14:0,81,1555	0/0:36,0:26:64.09:0,64,1189	0/0:31,0:30:79.33:0,79,1515	0/0:33,0:33:68.81:0,69,1351	0/0:20,0:20:33.25:0,33,712	0/0:27,5:29:81.28:0,81,1646	0/0:19,0:19:26.89:0,27,538	0/0:24,0:23:53.28:0,53,1259	0/0:4,0:4:6.02:0,6,122	0/0:19,0:19:18.06:0,18,354	0/0:32,0:32:60.93:0,61,1235	0/0:16,0:16:18.05:0,18,330	0/0:15,0:14:8.71:0,9,181	0/0:38,0:38:53.30:0,53,1196	0/0:19,0:19:29.83:0,30,486	0/0:7,0:7:15.05:0,15,304	0/1:17,2:18:41.70:42,0,811	0/0:11,4:15:17.85:0,18,365	0/0:7,2:9:9.03:0,9,172	0/0:27,0:27:59.95:0,60,1212	0/0:33,0:33:38.95:0,39,766	0/0:20,0:19:15.04:0,15,305	0/0:14,3:17:21:0,21,422	0/1:18,3:21:11.33:11,0,883	0/1:15,7:22:83.83:84,0,402	0/1:4,2:6:47.93:48,0,183
chr10	41362626	.	A	AAGAT	1100.83	PASS	AB=1.000;AC=25;AF=0.500;AN=50;BaseQRankSum=-0.339;DP=628;FS=3.512;HRun=0;HaplotypeScore=204.1369;InbreedingCoeff=0.1111;MQ=53.84;MQ0=10;MQRankSum=0.345;QD=2.61;ReadPosRankSum=-2.162;VQSLOD=2.1466;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:27:2.98:76,0,3	1/1:2,8:11:12.51:279,13,0	./.	./.	0/1:29,0:29:43.44:43,0,75	0/0:27,0:25:14.82:0,15,161	0/0:16,0:16:2.67:0,3,35	0/1:44,0:35:0:0,0,0	0/1:24,0:23:9.53:10,0,16	0/0:26,0:23:26.34:0,26,193	0/0:20,0:19:4.39:0,4,20	0/1:24,0:24:4.01:15,0,4	1/1:12,0:11:5.37:25,5,0	0/1:17,0:17:14.18:14,0,95	0/0:27,0:22:2.88:0,3,15	0/1:30,0:30:99:144,0,149	0/0:24,0:24:32.90:0,33,413	0/1:18,0:16:19.98:20,0,52	0/1:23,0:22:26.20:26,0,30	1/1:34,0:34:12.82:214,13,0	1/1:18,0:17:5.96:63,6,0	1/1:27,0:27:10.30:44,10,0	1/1:28,0:28:5.90:41,6,0	./.	0/0:31,0:31:2.92:0,3,17	1/1:29,0:29:9.52:178,10,0	0/1:20,0:20:4.11:45,0,4	0/1:7,0:7:1.46:17,0,1
chr10	41362672	.	GAT	G	503.60	PASS	AB=0.975;AC=17;AF=0.315;AN=54;BaseQRankSum=2.241;DP=662;FS=13.147;HRun=0;HaplotypeScore=219.5193;InbreedingCoeff=0.0982;MQ=38.34;MQ0=38;MQRankSum=-0.288;QD=1.54;ReadPosRankSum=-1.370;VQSLOD=1.1778;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:24:14.74:15,0,129	0/0:11,0:11:18.93:0,19,232	0/0:16,0:1:1.25:0,1,3	0/0:30,0:1:2.50:0,2,9	0/1:30,0:30:22.12:22,0,365	0/1:23,0:18:10.03:10,0,116	0/0:20,0:17:10.45:0,10,77	0/0:36,0:17:36.53:0,37,234	0/0:11,0:13:5.53:0,6,49	1/1:28,4:22:21.51:381,22,0	1/1:24,9:23:5.38:48,5,0	0/1:26,0:26:4.57:5,0,33	0/0:14,0:15:12.71:0,13,83	0/0:14,0:14:20.37:0,20,430	1/1:16,1:11:2.98:22,3,0	0/0:29,0:29:12.69:0,13,645	0/0:31,0:31:24.62:0,25,490	0/1:19,0:16:44.14:44,0,93	0/0:26,0:20:53.14:0,53,512	0/0:36,0:36:41.14:0,41,385	0/0:12,0:12:12.32:0,12,76	0/1:16,0:21:33.75:34,0,62	0/1:39,0:37:4.59:5,0,53	./.	1/1:17,5:20:2.73:20,3,0	0/1:33,1:34:33.83:34,0,417	0/0:20,0:20:4.14:0,4,108	0/1:7,0:7:15.58:20,0,16
chr10	41362676	.	GAT	G	2428.55	PASS	AB=0.902;AC=21;AF=0.389;AN=54;BaseQRankSum=1.963;DP=685;FS=5.005;HRun=0;HaplotypeScore=215.4447;InbreedingCoeff=0.2461;MQ=37.93;MQ0=41;MQRankSum=-1.823;QD=6.88;ReadPosRankSum=2.184;VQSLOD=3.0954;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:28.37:0,28,213	0/0:11,0:11:18.53:0,19,245	0/0:22,0:1:1.25:0,1,3	0/0:44,0:5:5.49:0,5,35	0/0:31,0:30:59.01:0,59,466	0/0:22,1:19:4.84:0,5,208	0/1:16,5:18:15.18:15,0,79	0/1:32,0:16:61.76:70,0,62	0/1:12,1:13:32.29:37,0,32	0/1:33,0:23:43.48:43,0,238	0/0:35,0:24:5.67:0,6,41	1/1:20,6:26:6.71:133,7,0	1/1:15,2:14:16.19:92,16,0	0/0:14,0:14:30.66:0,31,359	0/0:17,0:11:2.99:0,3,29	0/0:29,0:29:56.04:0,56,676	0/0:32,0:32:37.22:0,37,242	0/1:19,0:16:1.57:2,0,70	0/1:23,0:18:99:125,0,132	1/1:27,9:36:31.23:617,31,0	1/1:10,3:12:14.76:171,15,0	0/1:16,3:19:2.33:52,0,2	0/1:27,12:37:32.05:94,0,32	./.	0/0:24,0:22:3.01:0,3,30	1/1:28,7:34:21.85:772,22,0	1/1:17,4:20:29.82:313,30,0	0/1:4,2:6:6.98:68,0,7
chr10	41362678	.	TAG	T	1261.43	PASS	AB=0.982;AC=25;AF=0.463;AN=54;BaseQRankSum=2.263;DP=682;FS=1.560;HRun=0;HaplotypeScore=222.0397;InbreedingCoeff=0.1314;MQ=37.94;MQ0=37;MQRankSum=2.197;QD=3.03;ReadPosRankSum=2.094;VQSLOD=2.8393;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:29,2:30:51.56:58,0,52	0/0:11,0:11:17.10:0,17,227	0/0:23,0:2:4.26:0,4,40	0/0:45,0:5:8.51:0,9,87	0/1:30,1:30:8.99:9,0,204	0/1:22,0:18:58.53:59,0,173	0/0:21,1:19:1.10:0,1,42	0/1:26,0:16:32.65:33,0,150	0/1:14,0:14:13.67:17,0,14	0/1:33,1:24:52.19:52,0,388	0/0:35,0:24:2.05:0,2,51	1/1:26,0:26:7.38:52,7,0	1/1:17,0:14:6.62:86,7,0	0/0:14,0:14:16.30:0,16,241	0/0:16,0:10:2.81:0,3,51	0/0:29,0:29:22.78:0,23,434	0/0:31,0:31:25.97:0,26,129	0/0:20,0:17:0.84:0,1,22	0/1:22,1:18:65.51:66,0,92	1/1:34,0:34:33.90:245,34,0	1/1:14,0:13:11.99:72,12,0	1/1:14,0:16:2.26:27,2,0	1/1:40,0:38:5.94:46,6,0	./.	0/1:25,0:23:19.43:19,0,46	0/1:35,0:34:5.96:349,0,6	1/1:20,1:20:26.59:164,27,0	1/1:4,2:6:11.37:77,11,0
chr10	41362682	.	GAT	G	1911.05	PASS	AB=0.910;AC=22;AF=0.407;AN=54;BaseQRankSum=4.678;DP=682;FS=15.628;HRun=0;HaplotypeScore=216.8899;InbreedingCoeff=0.3193;MQ=37.91;MQ0=39;MQRankSum=-3.252;QD=5.83;ReadPosRankSum=2.202;VQSLOD=2.0139;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:31:35.49:0,35,273	0/0:10,0:10:18.03:0,18,335	0/0:23,0:2:4.26:0,4,50	0/0:46,0:5:8.97:0,9,89	0/0:30,0:29:62.72:0,63,567	0/1:14,5:17:99:116,0,141	0/1:21,0:17:14.88:15,0,30	1/1:20,3:14:8.64:147,9,0	1/1:15,0:14:9.61:58,10,0	0/1:31,0:21:9.50:9,0,328	0/0:37,0:26:5.98:0,6,78	0/1:12,13:25:7.38:7,0,14	1/1:17,0:14:14.68:90,15,0	0/0:12,0:12:30.02:0,30,365	0/0:16,0:11:6:0,6,69	0/0:29,0:29:56.93:0,57,595	0/0:31,0:31:62.62:0,63,561	0/1:19,0:16:16.70:17,0,26	0/1:22,0:18:11.39:212,0,11	1/1:31,8:39:32.06:371,32,0	1/1:13,0:12:9.52:66,10,0	1/1:17,0:17:14.60:87,15,0	0/0:27,15:40:7.49:0,7,104	./.	0/0:25,0:23:3.01:0,3,46	0/1:27,7:33:57.96:585,0,58	1/1:19,4:22:21.38:310,21,0	0/1:10,0:10:2.44:2,0,78
chr10	41362684	.	TAGATAG	T	1219.13	PASS	AB=0.988;AC=20;AF=0.370;AN=54;BaseQRankSum=5.863;DP=695;FS=1.659;HRun=0;HaplotypeScore=243.0846;InbreedingCoeff=-0.0688;MQ=38.34;MQ0=43;MQRankSum=-3.043;QD=3.28;ReadPosRankSum=0.512;VQSLOD=2.7035;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:33:17.56:0,18,431	0/0:11,0:11:21:0,21,437	0/0:24,0:2:5.98:0,6,73	0/0:47,0:5:8.96:0,9,98	0/0:32,0:31:25.12:0,25,684	0/1:19,1:18:49.72:97,0,50	1/1:21,0:17:0.89:2,1,0	0/1:20,0:12:24.69:44,0,25	1/1:15,1:15:10.64:88,11,0	0/1:31,0:23:81.02:223,0,81	0/0:37,0:26:5.77:0,6,67	0/0:25,0:25:3.42:0,3,47	1/1:13,4:13:16.67:245,17,0	0/1:12,0:12:27.43:27,0,228	0/0:16,0:11:2.80:0,3,49	0/1:27,0:27:82.68:83,0,324	0/0:33,0:32:41.63:0,42,891	0/1:19,0:16:11.78:12,0,21	0/1:22,0:18:67.44:67,0,188	0/1:38,0:38:73.22:73,0,173	0/0:17,0:16:6.94:0,7,112	1/1:16,0:16:17.06:175,17,0	0/1:43,0:40:1.76:2,0,215	./.	0/0:27,0:25:8.43:0,8,115	0/1:34,0:33:94.91:146,0,95	0/1:24,0:23:34.77:35,0,121	0/1:9,1:10:61.82:62,0,189
chr10	41362686	.	GAT	G	2191.04	PASS	AB=0.882;AC=20;AF=0.370;AN=54;BaseQRankSum=3.831;DP=696;FS=5.923;HRun=0;HaplotypeScore=214.6924;InbreedingCoeff=-0.0205;MQ=38.62;MQ0=45;MQRankSum=-3.624;QD=5.81;ReadPosRankSum=4.856;VQSLOD=2.6616;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:33:44.12:0,44,719	0/0:11,0:11:21.07:0,21,386	0/0:25,0:2:4.26:0,4,52	0/0:47,0:5:9.02:0,9,95	0/0:31,0:31:57.61:0,58,962	0/1:19,1:18:9.96:10,0,132	1/1:13,8:17:3:29,3,0	0/1:13,4:10:9.56:167,0,10	1/1:12,4:15:9.78:88,10,0	0/1:33,0:22:69.10:69,0,153	0/0:36,0:25:9:0,9,122	0/1:19,5:24:39.11:39,0,50	1/1:11,6:13:17.22:126,17,0	0/0:12,0:12:21.07:0,21,346	0/0:16,0:11:8.99:0,9,105	0/0:26,0:26:45.11:0,45,628	0/0:33,0:32:60.33:0,60,1012	0/1:18,0:15:12.06:12,0,77	0/1:22,0:18:99:156,0,225	0/1:30,9:39:64.97:470,0,65	0/1:14,2:15:59.34:59,0,155	1/1:7,9:16:18.29:147,18,0	0/1:32,13:41:40.76:41,0,259	./.	0/0:27,0:25:12.03:0,12,163	0/1:27,8:34:84.48:666,0,84	0/1:20,5:24:99:222,0,193	0/1:11,2:13:60.28:60,0,340
chr10	41362688	.	TAG	T	845.47	PASS	AB=0.969;AC=21;AF=0.389;AN=54;BaseQRankSum=5.011;DP=710;FS=2.182;HRun=0;HaplotypeScore=222.1429;InbreedingCoeff=-0.1626;MQ=38.61;MQ0=46;MQRankSum=-3.497;QD=2.08;ReadPosRankSum=1.470;VQSLOD=2.7267;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,2:33:41.29:0,41,666	0/0:10,0:10:21.07:0,21,384	0/0:25,0:2:4.26:0,4,54	0/0:48,0:5:9.02:0,9,94	0/0:30,0:29:31.75:0,32,839	0/1:19,2:19:18.80:19,0,184	1/1:17,2:15:1.25:4,1,0	0/1:18,0:11:45.57:89,0,46	1/1:16,0:15:7.96:34,8,0	0/1:30,6:25:99:271,0,111	0/0:23,14:25:5.09:0,5,95	0/1:24,0:24:21.19:21,0,46	1/1:17,0:13:6.77:89,7,0	0/1:11,0:11:24:24,0,258	0/0:8,8:11:5.82:0,6,98	0/1:26,1:27:24.36:24,0,458	0/0:33,0:32:41.71:0,42,881	0/1:16,2:16:30.18:30,0,81	0/1:22,0:19:51:51,0,281	0/1:38,0:38:68.30:68,0,202	0/0:17,1:17:9.20:0,9,220	1/1:16,0:16:4.28:44,4,0	0/1:47,0:43:35.37:35,0,241	./.	0/0:21,11:30:12.91:0,13,206	0/1:35,0:34:99:164,0,161	0/1:27,0:26:27.19:27,0,354	0/1:14,0:13:10.06:10,0,329
chr10	41362690	.	G	GAT	833.59	PASS	AB=0.986;AC=18;AF=0.333;AN=54;BaseQRankSum=2.024;DP=740;FS=6.037;HRun=0;HaplotypeScore=229.7511;InbreedingCoeff=-0.3169;MQ=38.68;MQ0=48;MQRankSum=1.423;QD=1.83;ReadPosRankSum=-1.177;VQSLOD=2.0321;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:34,1:34:82.44:82,0,131	0/0:10,0:10:21.07:0,21,276	0/1:26,0:2:0.62:1,0,41	0/0:50,0:5:9.01:0,9,88	0/1:32,0:31:23.04:23,0,98	0/1:21,0:19:19.62:20,0,172	1/1:18,0:14:1.25:3,1,0	0/1:22,0:15:46.56:47,0,53	0/0:19,0:18:5.96:0,6,28	0/1:37,1:26:64.22:173,0,64	0/1:40,0:28:20.29:20,0,65	0/0:24,0:24:4.24:0,4,14	0/0:18,0:13:2.36:0,2,17	0/1:11,0:11:53.33:53,0,66	0/1:19,0:14:42.54:43,0,76	1/1:26,0:26:1.97:182,2,0	0/0:32,0:31:38.45:0,38,399	0/1:17,2:16:33.70:34,0,63	0/1:20,1:19:93.97:94,0,202	0/1:39,0:38:66.73:67,0,202	0/0:18,0:17:10.27:0,10,199	0/0:17,0:16:5.13:0,5,38	0/1:51,0:46:32.19:38,0,32	./.	0/0:32,0:30:13.06:0,13,186	0/1:37,0:36:99:100,0,325	0/0:29,0:28:5:0,5,414	0/0:15,0:14:17.71:0,18,321
chr10	41362722	.	G	GAGAT	419.85	PASS	AB=0.987;AC=13;AF=0.260;AN=50;BaseQRankSum=-0.889;DP=844;FS=5.881;HRun=0;HaplotypeScore=228.1199;InbreedingCoeff=-0.0508;MQ=39.48;MQ0=72;MQRankSum=2.122;QD=1.26;ReadPosRankSum=-3.454;VQSLOD=1.7785;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:34:34.16:0,34,521	0/0:7,0:7:18.06:0,18,305	./.	./.	0/0:40,0:36:33.11:0,33,535	0/1:25,0:20:96.59:97,0,232	0/1:23,0:19:35.15:35,0,127	0/0:66,0:29:61.48:0,61,791	1/1:22,8:26:3.90:55,4,0	0/0:51,0:34:49.93:0,50,861	0/0:36,0:23:3.29:0,3,7	0/0:25,0:25:2.29:0,2,49	0/1:27,4:25:7.11:116,0,7	0/0:12,0:12:9.03:0,9,140	0/0:21,0:16:5.84:0,6,44	0/0:17,0:17:20.09:0,20,334	0/1:25,0:24:42.39:42,0,430	0/1:27,0:24:21.99:22,0,168	0/1:31,0:26:86.11:86,0,542	0/1:45,0:43:13.76:14,0,593	0/0:20,0:17:12.47:0,12,151	1/1:32,3:33:4.90:65,5,0	0/0:41,0:37:36.02:0,36,560	./.	0/1:46,0:44:17.46:17,0,87	0/0:37,0:35:23.44:0,23,841	0/0:41,0:38:3.14:0,3,646	0/1:16,0:16:13.91:14,0,237
chr10	41362736	.	GAGAT	G	1444.95	PASS	AB=0.985;AC=15;AF=0.288;AN=52;BaseQRankSum=3.544;DP=829;FS=10.840;HRun=0;HaplotypeScore=243.1388;InbreedingCoeff=-0.1310;MQ=39.87;MQ0=67;MQRankSum=2.272;QD=3.31;ReadPosRankSum=-0.196;VQSLOD=1.1684;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:34:34.20:0,34,552	0/0:7,0:7:21.07:0,21,495	./.	./.	0/0:41,0:36:30.38:0,30,397	0/1:26,1:22:25.64:26,0,654	0/0:24,0:19:15.52:0,16,313	0/0:77,0:34:64.05:0,64,878	0/1:29,0:24:1.15:1,0,68	0/1:45,2:36:99:309,0,638	0/1:35,1:27:69.29:69,0,72	1/1:22,3:25:5.06:90,5,0	0/1:29,0:21:22.82:23,0,106	0/0:11,0:11:6:0,6,66	0/1:23,1:20:97:101,0,97	0/0:18,0:18:21.01:0,21,236	0/0:23,0:23:33.02:0,33,462	0/1:24,0:22:99:169,0,171	0/0:32,0:26:46.15:0,46,898	0/1:44,0:42:61.68:62,0,840	0/0:21,0:18:13.23:0,13,295	0/1:34,0:31:18.20:31,0,18	0/1:44,0:39:49.85:510,0,50	1/1:21,0:14:1.55:4,2,0	0/1:49,1:48:99:197,0,267	0/0:34,1:33:4.64:0,5,798	0/0:36,1:34:43.27:0,43,903	0/0:15,0:15:29.50:0,30,600
chr10	41362752	.	TAG	T	30.89	PASS	AB=0.949;AC=6;AF=0.115;AN=52;BaseQRankSum=4.881;DP=767;FS=15.939;HRun=0;HaplotypeScore=220.2719;InbreedingCoeff=0.0774;MQ=40.91;MQ0=62;MQRankSum=-0.276;QD=0.25;ReadPosRankSum=0.894;VQSLOD=1.6867;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:37,1:36:47.41:47,0,472	0/0:9,0:9:27.09:0,27,464	./.	./.	0/0:37,1:33:23.76:0,24,270	0/0:35,0:30:57.18:0,57,950	0/0:25,0:20:27.56:0,28,466	0/0:72,0:32:70.41:0,70,1384	0/1:25,3:23:1.16:1,0,49	0/0:44,0:33:22.12:0,22,461	0/0:29,0:24:12.49:0,12,68	0/0:20,0:20:2.87:0,3,25	0/0:26,1:19:21.22:0,21,246	0/0:11,0:11:5.49:0,5,24	0/0:27,0:22:18.39:0,18,104	0/0:15,0:15:22.03:0,22,135	0/0:22,1:23:29.15:0,29,344	0/1:21,2:21:61.59:68,0,62	0/0:26,0:23:64.54:0,65,973	0/0:33,0:31:60.33:0,60,968	0/0:20,0:17:15.94:0,16,269	0/0:33,2:32:10.44:0,10,95	0/0:36,1:33:17.45:0,17,69	1/1:15,1:10:1.55:4,2,0	0/0:51,0:49:13.89:0,14,149	0/0:27,0:25:67.41:0,67,963	0/0:31,0:28:60.20:0,60,1050	0/1:19,0:19:7.22:7,0,372
chr10	41362762	.	TAGATAGATAG	T	1015.13	PASS	AB=0.892;AC=11;AF=0.212;AN=52;BaseQRankSum=2.680;DP=753;FS=8.561;HRun=0;HaplotypeScore=267.2626;InbreedingCoeff=-0.0740;MQ=42.19;MQ0=61;MQRankSum=-2.295;QD=3.22;ReadPosRankSum=-0.460;VQSLOD=1.0431;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:37:9.59:0,10,222	0/0:10,0:10:27.09:0,27,855	./.	./.	0/0:33,0:28:13.27:0,13,122	0/0:37,0:30:53.19:0,53,823	0/0:22,0:18:27.98:0,28,529	0/0:59,0:24:71.86:0,72,788	0/1:29,0:24:1.15:1,0,40	0/1:26,18:37:99:749,0,360	0/1:13,13:24:43.02:43,0,157	0/0:17,0:17:8.90:0,9,71	0/1:29,0:20:80.49:117,0,80	0/0:11,0:11:6.01:0,6,60	0/0:12,13:23:15.33:0,15,246	0/0:16,0:16:20.98:0,21,209	0/1:24,0:24:42:42,0,143	0/1:24,0:23:29.56:30,0,185	0/0:28,0:23:64.60:0,65,942	0/0:31,0:29:57.01:0,57,817	0/0:22,0:19:21.54:0,22,319	0/1:34,0:32:16.86:17,0,51	0/1:36,0:31:99:101,0,141	1/1:16,0:10:5.04:48,5,0	0/1:25,28:53:4.73:5,0,218	0/0:25,0:23:57.53:0,58,965	0/0:34,0:31:64.19:0,64,828	0/0:19,0:19:24.88:0,25,580
chr10	41362770	.	TAG	T	1800.96	PASS	AB=0.856;AC=15;AF=0.278;AN=54;BaseQRankSum=0.327;DP=753;FS=3.067;HRun=0;HaplotypeScore=203.1164;InbreedingCoeff=0.1399;MQ=43.60;MQ0=52;MQRankSum=4.829;QD=5.13;ReadPosRankSum=5.526;VQSLOD=3.0461;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:38,1:36:62.13:62,0,204	0/0:12,0:12:33.11:0,33,548	0/0:11,0:5:15.04:0,15,174	./.	0/0:31,0:27:16.94:0,17,72	0/1:15,20:29:99:375,0,319	0/1:13,11:21:99:184,0,207	0/0:58,0:32:70.05:0,70,885	0/1:27,3:25:1.16:1,0,46	0/1:40,0:34:99:388,0,409	0/1:24,0:23:24.39:24,0,203	1/1:3,14:17:11.91:172,12,0	0/1:16,12:19:76.44:117,0,76	0/0:13,0:13:5.49:0,5,24	0/0:25,0:23:15.34:0,15,263	0/0:16,0:16:20:0,20,163	0/0:18,1:19:17.56:0,18,165	0/1:25,3:25:14.63:15,0,287	0/0:30,0:25:44.06:0,44,687	0/0:32,0:30:27.99:0,28,493	0/0:25,0:22:12.89:0,13,186	0/1:30,4:32:4.97:78,0,5	1/1:13,22:30:3.79:452,4,0	1/1:8,9:11:7.58:90,8,0	0/0:51,0:51:26.55:0,27,383	0/0:25,0:23:19.54:0,20,428	0/0:33,0:31:48.60:0,49,783	0/0:20,0:20:20.59:0,21,369
chr10	41362772	.	GAGAT	G	2488.87	PASS	AB=0.923;AC=19;AF=0.339;AN=56;BaseQRankSum=-5.274;DP=769;FS=13.079;HRun=0;HaplotypeScore=207.8978;InbreedingCoeff=0.5955;MQ=44.10;MQ0=53;MQRankSum=-0.829;QD=7.21;ReadPosRankSum=-0.311;VQSLOD=1.2335;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:36:4.13:20,4,0	0/0:12,0:12:24.08:0,24,482	0/0:13,0:5:11.78:0,12,134	0/0:2,0:1:3.01:0,3,43	0/0:8,0:30:18.29:0,18,143	0/0:34,0:28:31.76:0,32,194	0/0:24,0:21:14.77:0,15,106	1/1:58,0:33:39.13:559,39,0	0/0:19,0:28:1.34:0,1,39	0/1:39,0:34:99:109,0,110	0/1:24,0:23:0.35:0,0,1	0/0:17,0:17:8.78:0,9,37	0/0:23,0:20:13.53:0,14,182	0/0:1,0:14:5.99:0,6,48	0/0:25,0:23:3.01:0,3,42	0/0:3,0:19:14.96:0,15,129	0/0:9,0:21:7.25:0,7,69	0/0:27,0:24:8.37:0,8,68	1/1:24,6:25:15.15:282,15,0	1/1:23,6:29:33.11:516,33,0	1/1:25,1:23:21.07:316,21,0	0/0:21,0:34:9.58:0,10,133	0/0:30,0:29:26.97:0,27,160	1/1:15,0:11:1.46:4,1,0	0/0:50,0:50:6.02:0,6,94	1/1:19,8:25:31.30:503,31,0	1/1:28,5:31:17.89:277,18,0	0/1:14,6:20:52.87:84,0,53
chr10	41363029	.	TG	T	2733.62	PASS	AB=0.927;AC=14;AF=0.250;AN=56;BaseQRankSum=0.665;DP=636;FS=1.830;HRun=9;HaplotypeScore=80.1935;InbreedingCoeff=0.8516;MQ=84.59;MQ0=1;MQRankSum=-0.588;QD=15.53;ReadPosRankSum=1.145;VQSLOD=4.0080;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,25:31:69.03:630,69,0	0/1:8,1:9:0.39:0,0,250	0/0:22,1:23:21.39:0,21,349	0/1:20,1:21:12.76:13,0,263	0/0:11,0:26:42.95:0,43,247	1/1:2,27:29:72.04:659,72,0	1/1:2,16:18:39.02:357,39,0	0/0:31,2:33:32.67:0,33,594	0/0:26,0:26:69.19:0,69,786	0/0:18,0:25:28.74:0,29,177	0/0:8,0:13:14.50:0,14,98	1/1:3,22:25:66.03:604,66,0	0/0:17,0:17:42.11:0,42,476	0/0:10,0:27:48.81:0,49,287	0/0:11,0:23:34.26:0,34,193	0/0:15,0:26:43.50:0,44,307	0/0:3,0:22:51.30:0,51,280	0/0:7,0:15:28.88:0,29,183	0/0:14,0:14:39.12:0,39,450	0/0:28,0:28:69.18:0,69,777	0/0:28,1:29:41.74:0,42,734	0/0:23,0:23:51.15:0,51,589	1/1:5,17:21:27:247,27,0	1/1:5,16:21:44.96:412,45,0	0/0:12,0:29:28.82:0,29,176	0/0:17,0:17:39.11:0,39,444	0/0:27,0:27:69.17:0,69,767	0/0:12,0:12:33.10:0,33,381
chr10	41363627	.	G	GA	25993.91	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-0.966;DP=707;FS=0.820;HRun=0;HaplotypeScore=95.1472;InbreedingCoeff=0.9953;MQ=86.88;MQ0=0;MQRankSum=-6.581;QD=43.91;ReadPosRankSum=3.724;VQSLOD=4.8036;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:62,0:62:99:0,178,2436	0/0:5,0:5:15.05:0,15,210	0/0:26,0:26:59.81:0,60,791	0/0:22,0:22:54:0,54,679	1/1:1,15:16:45.15:719,45,0	1/1:2,21:22:60.20:959,60,0	1/1:1,30:31:84.29:1343,84,0	1/1:0,40:40:99:1873,120,0	1/1:0,18:18:51.17:815,51,0	1/1:1,31:32:90.26:1404,90,0	1/1:0,14:14:39.13:622,39,0	1/1:0,34:34:87.30:1391,87,0	1/1:3,25:28:78.22:1219,78,0	1/1:0,27:27:72.25:1151,72,0	1/1:0,22:22:66.23:1055,66,0	1/1:2,30:32:90.31:1439,90,0	1/1:1,27:28:75.26:1199,75,0	1/1:0,21:21:57.19:911,57,0	1/1:2,21:23:69.18:1046,69,0	1/1:0,20:20:57.19:908,57,0	1/1:0,27:27:72.25:1151,72,0	1/1:1,22:23:60.20:958,60,0	1/1:0,14:14:29.89:479,30,0	1/1:0,12:12:36.12:576,36,0	1/1:1,31:33:90.31:1428,90,0	1/1:1,26:27:81.28:1285,81,0	1/1:0,32:32:90.31:1439,90,0	1/1:0,15:15:39.13:623,39,0
chr10	41365017	.	AT	A	1689.32	PASS	AB=0.757;AC=32;AF=0.571;AN=56;BaseQRankSum=5.050;DP=479;FS=7.853;HRun=15;HaplotypeScore=61.9132;InbreedingCoeff=0.3549;MQ=68.89;MQ0=0;MQRankSum=-0.240;QD=4.98;ReadPosRankSum=7.831;VQSLOD=1.3170;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:29,6:35:49.78:50,0,319	0/1:8,2:10:11.55:12,0,152	0/1:9,1:10:6.82:7,0,73	0/0:7,0:5:4.72:0,5,21	1/1:7,11:19:5.11:152,5,0	1/1:0,0:15:22.39:65,22,0	1/1:1,0:14:17.89:53,18,0	0/0:15,0:26:46.64:0,47,307	1/1:8,18:28:44.38:279,44,0	1/1:14,9:24:22.31:139,22,0	0/1:9,10:20:4.13:82,0,4	1/1:2,0:11:9.67:29,10,0	1/1:7,7:14:0.13:127,0,0	1/1:6,11:17:20.43:134,20,0	0/1:6,3:9:14.60:46,0,15	0/1:6,6:12:8.64:78,0,9	1/1:4,18:27:40.45:296,40,0	0/1:5,10:15:26.08:108,0,26	0/0:7,0:13:29.16:0,29,193	0/0:26,0:28:44.99:0,45,336	0/0:7,0:11:11.83:0,12,91	0/1:9,1:12:30.23:30,0,39	1/1:3,0:15:9.92:29,10,0	1/1:2,0:16:24.43:71,24,0	1/1:6,7:16:17.84:94,18,0	0/0:18,0:25:23.13:0,23,208	0/0:14,1:25:13.20:0,13,155	0/0:5,0:5:6:0,6,53
chr10	41366682	.	G	GCACACA	1477.12	PASS	AB=1.000;AC=25;AF=0.500;AN=50;BaseQRankSum=-1.923;DP=472;FS=11.097;HRun=0;HaplotypeScore=108.6538;InbreedingCoeff=0.4674;MQ=56.95;MQ0=21;MQRankSum=-0.117;QD=6.37;ReadPosRankSum=-1.481;VQSLOD=1.4611;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:25:12.86:100,13,0	0/0:11,0:11:6.02:0,6,120	./.	./.	0/0:10,11:23:0:0,0,1	1/1:18,0:18:18.04:239,18,0	1/1:13,0:11:5.94:41,6,0	0/0:15,0:18:4.84:0,5,29	1/1:7,0:14:3.01:49,3,0	0/1:17,0:15:82.12:82,0,95	1/1:13,0:12:9.85:72,10,0	0/0:15,0:15:10.98:0,11,78	1/1:16,0:15:23.53:329,24,0	1/1:13,0:12:12.01:144,12,0	0/1:15,0:15:46.82:52,0,47	1/1:12,1:13:9.39:98,9,0	1/1:17,1:17:17.86:216,18,0	0/1:11,0:11:1.19:61,0,1	0/0:12,0:12:6.86:0,7,90	0/1:6,0:11:0:0,0,0	0/0:21,0:20:33.08:0,33,532	./.	0/0:16,0:14:12.47:0,12,136	0/0:31,0:31:42.35:0,42,420	1/1:17,0:17:0.95:155,1,0	0/1:13,0:17:4.03:4,0,163	0/0:7,0:7:0.42:0,0,111	0/0:10,0:10:9.02:0,9,129
chr10	41366717	.	CACAGAG	C	458.42	PASS	AB=0.975;AC=13;AF=0.250;AN=52;BaseQRankSum=2.285;DP=505;FS=6.784;HRun=0;HaplotypeScore=115.3311;InbreedingCoeff=-0.0449;MQ=44.52;MQ0=36;MQRankSum=0.909;QD=2.21;ReadPosRankSum=-1.573;VQSLOD=1.6373;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:26.96:0,27,333	0/1:11,0:11:20.93:21,0,63	./.	./.	0/0:28,0:27:5.20:0,5,95	0/0:17,0:16:18.01:0,18,233	0/0:17,0:11:20.12:0,20,265	0/1:25,0:23:38.93:39,0,101	0/0:13,0:12:3.01:0,3,36	0/0:24,0:22:54.11:0,54,760	0/0:14,0:13:20.92:0,21,321	0/1:16,0:14:65.62:149,0,66	0/1:23,0:21:8.11:8,0,375	0/0:17,0:15:11.63:0,12,130	0/0:14,0:14:18.01:0,18,245	0/0:16,0:16:14.10:0,14,108	0/0:17,0:17:31.03:0,31,338	0/0:10,0:10:4.01:0,4,250	0/1:15,0:13:36.75:37,0,253	0/0:14,0:13:16.36:0,16,230	0/1:37,0:31:99:151,0,242	1/1:18,0:14:1.65:10,2,0	0/1:17,7:21:7.66:8,0,76	0/0:34,0:34:13:0,13,236	0/0:24,0:24:29.27:0,29,454	0/1:19,0:18:53.36:53,0,454	0/1:13,0:12:57.69:58,0,184	1/1:6,0:6:8.97:70,9,0
chr10	41366719	.	CAGAG	C	246.24	PASS	AB=1.000;AC=9;AF=0.188;AN=48;BaseQRankSum=0.240;DP=504;FS=14.483;HRun=0;HaplotypeScore=105.6383;InbreedingCoeff=0.4004;MQ=44.39;MQ0=35;MQRankSum=1.596;QD=1.95;ReadPosRankSum=-0.080;VQSLOD=0.9334;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:15.03:0,15,219	0/1:10,0:10:17.03:28,0,17	./.	./.	0/0:27,0:26:5.62:0,6,96	0/0:16,0:15:9:0,9,83	0/0:17,0:11:11.14:0,11,192	0/0:26,0:24:14.68:0,15,127	./.	0/0:24,0:22:33.11:0,33,563	0/0:14,0:13:15.01:0,15,228	1/1:15,0:13:15.05:211,15,0	0/1:23,0:21:28.82:29,0,194	0/0:19,0:17:2.84:0,3,59	0/0:13,0:13:9.03:0,9,141	0/0:16,0:16:2.99:0,3,24	0/0:18,0:17:18.91:0,19,257	0/0:10,0:10:13.53:0,14,203	0/0:17,0:15:13.43:0,13,227	0/0:14,0:13:16.40:0,16,230	0/0:37,0:31:19.38:0,19,273	1/1:20,0:16:1.61:10,2,0	0/1:24,0:21:0:0,0,0	1/1:18,16:34:6.02:94,6,0	0/0:24,0:24:16.95:0,17,275	0/0:22,0:21:2.19:0,2,409	0/0:12,0:11:12.30:0,12,188	./.
chr10	41367766	.	TTGTGTGTGTGTGTGTGTGTGTGTGTG	T	1681.94	PASS	AB=0.711;AC=5;AF=0.093;AN=54;BaseQRankSum=3.487;DP=533;FS=5.801;HRun=0;HaplotypeScore=324.9249;InbreedingCoeff=0.5120;MQ=61.17;MQ0=12;MQRankSum=-3.349;QD=28.51;ReadPosRankSum=-0.704;VQSLOD=1.5218;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:36.97:0,37,1793	0/0:4,0:7:8.68:0,9,625	0/0:22,0:13:3.01:0,3,42	0/0:17,0:13:2.98:0,3,21	0/0:19,0:20:26.97:0,27,1083	0/0:15,0:15:18.03:0,18,787	0/0:27,0:26:30.06:0,30,1454	0/0:23,0:22:30.09:0,30,782	1/1:12,3:14:6.02:403,6,0	0/0:17,0:19:33.08:0,33,935	0/0:9,0:14:9.01:0,9,276	0/0:15,0:18:15.04:0,15,827	1/1:5,12:16:8.29:603,8,0	0/0:14,0:24:30.07:0,30,804	0/0:13,0:18:33.10:0,33,1321	0/0:11,0:15:18.05:0,18,673	0/0:27,0:27:39.04:0,39,1302	0/0:19,0:25:20.97:0,21,422	0/0:21,0:22:41.57:0,42,1404	0/0:13,0:15:15.01:0,15,381	0/0:15,0:15:15.01:0,15,476	0/1:16,11:27:17.88:788,0,18	0/0:8,0:13:6.01:0,6,243	0/0:27,0:29:33.95:0,34,1689	0/0:13,0:16:14.98:0,15,462	0/0:16,0:16:21.06:0,21,857	0/0:15,0:15:21.02:0,21,778	./.
chr10	41368162	.	A	AT	1538.28	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-9.742;DP=671;FS=13.799;HRun=6;HaplotypeScore=64.7980;InbreedingCoeff=0.9758;MQ=87.50;MQ0=0;MQRankSum=-2.730;QD=29.02;ReadPosRankSum=0.888;VQSLOD=3.1683;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,123,1248	0/0:5,0:5:15.03:0,15,152	0/0:28,0:28:62.86:0,63,618	0/0:28,0:28:81.12:0,81,805	0/0:29,0:29:66.14:0,66,673	1/1:1,30:31:84.27:1056,84,0	1/1:1,21:22:48.15:604,48,0	0/0:32,0:32:84.18:0,84,857	0/0:20,0:20:54.12:0,54,551	0/0:16,0:16:45.09:0,45,449	0/0:22,0:22:60.13:0,60,612	0/0:24,0:24:72.16:0,72,735	0/0:27,0:27:75.15:0,75,757	0/0:33,0:33:93.20:0,93,942	0/0:20,0:20:54.12:0,54,551	0/0:29,0:29:84.19:0,84,857	0/0:30,0:30:81.18:0,81,826	0/0:12,0:12:27.06:0,27,275	0/0:13,0:13:39.06:0,39,388	0/0:29,0:29:87.18:0,87,880	0/0:36,0:36:99:0,99,996	0/0:19,0:19:48.11:0,48,489	0/0:16,0:16:45.10:0,45,459	0/0:33,0:33:93.21:0,93,949	0/0:14,0:14:36.08:0,36,367	0/0:19,0:19:51.11:0,51,515	0/0:34,0:33:99:0,99,1010	0/0:6,0:6:12.03:0,12,122
chr10	41368486	.	GTT	G	3580	PASS	AB=0.993;AC=21;AF=0.375;AN=56;BaseQRankSum=-1.935;DP=717;FS=6.884;HRun=8;HaplotypeScore=204.0531;InbreedingCoeff=0.5793;MQ=72.18;MQ0=7;MQRankSum=0.361;QD=10.98;ReadPosRankSum=-0.177;VQSLOD=-0.4386;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,129,2031	0/0:6,0:6:18.05:0,18,281	0/0:41,1:31:60.05:0,60,809	0/0:37,0:25:41.85:0,42,496	0/0:26,0:27:74.12:0,74,608	0/0:25,0:25:20.56:0,21,457	0/1:25,1:26:46.76:47,0,327	0/1:32,0:32:67.65:68,0,295	0/0:24,0:24:32.20:0,32,420	1/1:1,12:13:33.05:385,33,0	1/1:5,12:17:42.09:487,42,0	1/1:28,0:28:50.48:161,50,0	0/0:24,0:24:0.87:0,1,387	0/0:31,0:34:96.42:0,96,753	1/1:3,15:18:51.13:594,51,0	0/0:21,0:23:63.59:0,64,480	0/0:23,0:25:64.64:0,65,514	1/1:7,15:22:63.05:685,63,0	0/1:32,0:32:98.87:99,0,361	0/0:34,0:34:14.23:0,14,570	0/1:31,0:31:99:109,0,415	0/0:12,0:12:24.76:0,25,193	1/1:30,0:30:43.18:138,43,0	1/1:27,0:26:28.95:116,29,0	1/1:6,17:23:57.07:660,57,0	0/1:27,0:27:32.60:33,0,378	0/0:23,0:23:18.37:0,18,445	0/0:7,0:7:12.78:0,13,137
chr10	41368492	.	TTTG	T	2881.60	PASS	AB=1.000;AC=8;AF=0.143;AN=56;BaseQRankSum=-8.151;DP=747;FS=9.201;HRun=0;HaplotypeScore=226.6478;InbreedingCoeff=0.7705;MQ=69.15;MQ0=8;MQRankSum=-1.449;QD=19.08;ReadPosRankSum=0.794;VQSLOD=2.0738;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,135,2779	0/0:7,0:7:21.05:0,21,390	0/0:50,0:37:72.52:0,73,1363	0/0:39,0:27:59.20:0,59,871	0/0:27,0:27:51.16:0,51,791	0/0:23,0:23:67.29:0,67,1014	0/0:31,0:31:83.94:0,84,1090	0/0:26,0:26:68.93:0,69,862	0/0:24,0:24:71.02:0,71,1032	0/0:15,0:15:4.82:0,5,76	0/0:16,0:16:23.10:0,23,91	1/1:0,26:26:69.24:1116,69,0	0/0:26,0:26:75.02:0,75,1040	0/1:37,0:37:2.10:2,0,892	0/0:18,0:18:26.30:0,26,74	0/1:28,0:27:0.71:1,0,687	0/0:25,0:23:35.01:0,35,623	0/0:22,0:22:15.38:0,15,94	0/0:33,0:32:79.86:0,80,1017	0/0:32,0:32:95.15:0,95,1348	0/0:31,0:31:80.77:0,81,1043	0/0:12,0:12:36.09:0,36,488	1/1:1,30:31:65.39:986,65,0	1/1:2,27:28:57.19:919,57,0	0/0:26,0:26:15.21:0,15,91	0/0:28,0:28:69.59:0,70,980	0/0:31,0:31:91.28:0,91,1235	0/0:7,0:7:20.93:0,21,286
chr10	41368493	.	T	TG	4800.28	PASS	AB=1.000;AC=16;AF=0.286;AN=56;BaseQRankSum=-9.745;DP=742;FS=5.851;HRun=0;HaplotypeScore=192.8033;InbreedingCoeff=0.2897;MQ=68.64;MQ0=8;MQRankSum=-3.280;QD=14.55;ReadPosRankSum=-5.556;VQSLOD=4.0202;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,135,1760	0/0:7,0:7:21.05:0,21,262	0/0:48,1:37:41.05:0,41,822	0/0:40,0:27:37.52:0,38,528	1/1:4,24:28:81.10:1079,81,0	0/0:23,0:23:44.58:0,45,158	0/1:31,0:31:64.92:90,0,65	0/1:25,0:25:36.76:37,0,46	0/1:24,0:24:18.54:19,0,94	0/0:15,0:15:15.89:0,16,137	0/0:15,0:15:38.42:0,38,191	0/0:26,0:26:5.74:0,6,44	0/0:26,0:26:32.83:0,33,165	1/1:10,26:37:99:1412,110,0	0/0:18,0:18:48.82:0,49,236	1/1:10,18:27:73.76:983,74,0	1/1:5,20:23:69.20:955,69,0	0/0:22,0:22:57.11:0,57,254	0/1:32,0:31:0.36:0,0,85	0/0:32,0:32:0.05:0,0,118	0/0:31,0:31:35.89:0,36,145	0/1:12,0:12:21.95:22,0,41	0/0:30,0:30:29.33:0,29,97	0/1:28,0:27:18.50:51,0,19	0/0:24,0:24:63.96:0,64,329	0/1:27,0:27:11.39:11,0,50	0/1:33,0:33:73.45:141,0,73	0/0:7,0:7:17.04:0,17,59
chr10	41368535	.	C	CG	4644.11	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-1.481;DP=699;FS=1.708;HRun=2;HaplotypeScore=130.4714;InbreedingCoeff=0.9949;MQ=82.51;MQ0=1;MQRankSum=-6.411;QD=40.04;ReadPosRankSum=1.286;VQSLOD=4.2742;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,123,1510	0/0:10,0:10:30.06:0,30,346	0/0:24,0:23:57.17:0,57,687	0/0:33,0:32:74.36:0,74,928	1/1:1,29:30:87.07:1177,87,0	0/0:25,0:25:75.24:0,75,929	0/0:42,0:42:99:0,123,1492	0/0:27,0:27:72.22:0,72,882	0/0:25,0:25:66.21:0,66,817	0/0:22,0:22:66.18:0,66,794	0/0:18,0:18:51.14:0,51,610	0/0:23,0:23:66.21:0,66,817	0/0:22,0:22:63.17:0,63,747	1/1:3,31:34:96.32:1364,96,0	0/0:19,0:19:51.16:0,51,628	1/1:1,27:28:78.73:1112,79,0	1/1:2,22:24:69.23:991,69,0	0/0:17,0:17:45.11:0,45,541	0/0:25,0:25:63.20:0,63,778	0/0:35,0:35:96.26:0,96,1144	0/0:20,0:20:57.16:0,57,692	0/0:8,0:8:24.08:0,24,297	0/0:31,0:31:78.23:0,78,946	0/0:27,0:27:63.16:0,63,763	0/0:20,0:20:60.19:0,60,743	0/0:26,0:26:78.25:0,78,967	0/0:35,0:35:99:0,99,1224	0/0:6,0:6:15.05:0,15,186
chr10	41369219	.	CTCTATCTA	C	3066.06	PASS	AB=0.848;AC=33;AF=0.688;AN=48;BaseQRankSum=3.682;DP=658;FS=2.564;HRun=0;HaplotypeScore=176.4368;InbreedingCoeff=0.6265;MQ=59.57;MQ0=11;MQRankSum=-7.334;QD=7.27;ReadPosRankSum=-0.979;VQSLOD=2.7752;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:33:0:0,0,0	0/0:13,0:13:3.28:0,3,928	./.	./.	0/0:16,1:25:15:0,15,179	1/1:16,12:27:9.03:219,9,0	0/1:20,0:20:0:0,0,0	./.	1/1:16,10:26:18.06:439,18,0	1/1:18,0:24:18.53:336,19,0	1/1:12,0:16:6.02:105,6,0	1/1:15,11:26:6.02:146,6,0	0/0:18,0:25:20.79:0,21,158	0/0:18,0:28:29.96:0,30,328	1/1:20,0:28:15.05:272,15,0	0/0:21,0:30:17.98:0,18,188	1/1:18,1:17:3.01:73,3,0	1/1:15,0:15:3:25,3,0	1/1:17,0:19:9.03:165,9,0	1/1:19,0:30:21.07:355,21,0	1/1:14,0:15:6.02:100,6,0	0/0:22,0:32:23.96:0,24,232	0/1:17,8:25:25.82:137,0,26	./.	1/1:17,16:33:15.05:365,15,0	1/1:9,0:14:11.83:146,12,0	1/1:26,0:32:15.05:273,15,0	1/1:15,0:14:3.01:73,3,0
chr10	41369704	.	CGTGTGTGTGTGT	C	3223.52	PASS	AB=0.685;AC=35;AF=0.648;AN=54;BaseQRankSum=6.651;DP=622;FS=7.445;HRun=0;HaplotypeScore=185.5257;InbreedingCoeff=0.5459;MQ=68.93;MQ0=14;MQRankSum=-3.972;QD=7.90;ReadPosRankSum=-1.541;VQSLOD=1.8891;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:34:15.01:0,15,193	0/0:8,0:8:18.53:0,19,819	0/0:22,0:16:3.01:0,3,34	./.	0/1:14,0:19:18.01:93,0,18	0/0:13,0:18:15.05:0,15,425	0/0:16,0:20:12.02:0,12,196	1/1:27,5:30:8.16:97,8,0	1/1:10,0:18:6.02:168,6,0	1/1:12,0:16:6.02:105,6,0	1/1:14,0:16:3.33:8,3,0	0/0:23,0:28:42.60:0,43,1208	1/1:5,0:19:21.07:586,21,0	0/1:10,1:20:16.42:136,0,16	1/1:16,0:27:13.40:340,13,0	0/1:8,1:25:1.36:284,0,1	1/1:16,0:22:9.03:153,9,0	1/1:14,0:19:9.03:251,9,0	1/1:13,0:14:8.98:183,9,0	1/1:11,0:11:2.97:20,3,0	1/1:29,16:44:3.01:36,3,0	1/1:13,0:20:6.38:94,6,0	0/0:9,0:9:6.02:0,6,291	0/0:20,0:29:15.01:0,15,203	1/1:15,0:23:11.07:257,11,0	1/1:17,6:23:18.06:346,18,0	1/1:18,10:28:6.02:161,6,0	1/1:3,0:6:6.02:88,6,0
chr10	41370104	.	CCT	C	3133.14	PASS	AB=0.528;AC=7;AF=0.125;AN=56;BaseQRankSum=5.632;DP=729;FS=2.530;HRun=0;HaplotypeScore=98.1288;InbreedingCoeff=0.8356;MQ=74.83;MQ0=0;MQRankSum=-1.921;QD=29.56;ReadPosRankSum=4.234;VQSLOD=5.5660;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:58:99:0,162,2633	0/0:12,0:12:33.11:0,33,571	0/0:30,0:29:81.22:0,81,1262	0/0:27,0:24:51.64:0,52,825	1/1:4,20:24:57.19:758,57,0	0/0:19,0:19:57.18:0,57,959	0/0:31,0:31:81.25:0,81,1341	0/0:31,0:31:66.21:0,66,1094	0/0:39,0:39:99:0,105,1787	0/0:25,0:25:74.81:0,75,712	0/0:23,0:23:66.17:0,66,716	0/0:31,0:31:87.27:0,87,1433	0/0:23,0:23:57.18:0,57,958	1/1:3,25:28:69.23:919,69,0	0/0:26,0:26:72.17:0,72,750	0/1:3,25:28:31.69:806,0,32	1/1:2,24:26:60.20:799,60,0	0/0:13,0:13:36.08:0,36,378	0/0:21,0:21:60.19:0,60,956	0/0:16,0:16:39.13:0,39,675	0/0:22,0:22:57.18:0,57,943	0/0:31,0:31:87.30:0,87,1477	0/0:22,0:22:48.16:0,48,800	0/0:27,0:27:75.24:0,75,1247	0/0:32,0:32:83.65:0,84,824	0/0:25,0:25:69.23:0,69,1152	0/0:32,0:32:87.28:0,87,1463	0/0:7,0:7:21.05:0,21,325
chr10	41370754	.	G	GTGTA	2569.94	PASS	AB=1.000;AC=20;AF=0.370;AN=54;BaseQRankSum=-0.030;DP=501;FS=12.617;HRun=0;HaplotypeScore=113.8527;InbreedingCoeff=0.4006;MQ=67.57;MQ0=22;MQRankSum=0.697;QD=9.24;ReadPosRankSum=2.167;VQSLOD=2.0216;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:47.80:0,48,403	0/0:9,0:9:20.97:0,21,215	0/0:26,0:16:38.93:0,39,353	0/0:26,0:21:40.60:0,41,352	./.	0/1:17,0:16:81.74:146,0,82	0/1:22,0:18:38.53:184,0,39	0/0:18,0:18:44.73:0,45,366	1/1:23,0:23:32.82:256,33,0	0/0:8,0:8:11.98:0,12,102	0/0:11,0:11:14.97:0,15,121	0/1:21,0:20:38.60:160,0,39	1/1:18,0:18:8.94:264,9,0	1/1:23,0:24:44.86:488,45,0	0/0:10,0:10:11.98:0,12,97	1/1:20,0:20:47.97:502,48,0	1/1:4,17:21:3.01:57,3,0	0/0:11,0:9:23.77:0,24,177	0/1:17,0:16:4.75:5,0,214	0/0:15,0:15:20.87:0,21,162	0/0:28,0:25:50.77:0,51,398	0/1:13,0:13:0.60:168,0,1	1/1:13,0:13:12.84:96,13,0	0/1:29,0:28:0.46:277,0,0	0/0:17,0:17:14.98:0,15,125	0/1:24,0:24:99:104,0,111	0/1:16,0:14:45.34:45,0,93	0/0:8,0:6:8.79:0,9,56
chr10	41370758	.	ATGTGTG	A	623.58	PASS	AC=12;AF=0.300;AN=40;BaseQRankSum=2.591;DP=517;FS=20.890;HRun=0;HaplotypeScore=126.0113;InbreedingCoeff=0.7063;MQ=63.56;MQ0=40;MQRankSum=3.140;QD=5.20;ReadPosRankSum=4.592;VQSLOD=0.7335;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:21:5.99:75,6,0	0/0:9,0:9:6.01:0,6,90	./.	./.	./.	0/0:19,0:17:21.01:0,21,358	0/0:23,0:18:17.87:0,18,301	0/0:21,0:21:14.87:0,15,156	0/0:12,7:20:0.47:0,0,1	./.	./.	1/1:23,0:21:16.98:119,17,0	1/1:18,0:18:15.01:205,15,0	0/0:25,0:25:9.46:0,9,181	./.	0/0:20,0:20:17.98:0,18,284	0/0:21,0:20:6.41:0,6,77	1/1:12,0:9:3.01:42,3,0	0/0:22,0:19:12.93:0,13,244	0/0:16,0:15:3.01:0,3,50	0/0:31,0:25:2.97:0,3,20	1/1:13,0:12:9.03:173,9,0	./.	1/1:31,0:28:11.63:153,12,0	./.	0/0:26,0:26:35.67:0,36,502	0/0:15,0:13:16.40:0,16,265	0/0:9,0:6:0:0,0,0
chr10	41370760	.	G	GTA	2497.09	PASS	AC=22;AF=0.407;AN=54;BaseQRankSum=1.002;DP=507;FS=0.000;HRun=0;HaplotypeScore=94.8938;InbreedingCoeff=0.9406;MQ=62.42;MQ0=40;MQRankSum=2.625;QD=11.30;ReadPosRankSum=4.117;VQSLOD=3.1254;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:19:47.80:0,48,379	0/0:10,0:10:20.91:0,21,188	0/0:24,0:14:38.93:0,39,353	0/0:24,0:19:40.57:0,41,352	./.	1/1:18,0:16:12.62:182,13,0	1/1:22,0:17:24.73:221,25,0	0/0:22,0:22:55.28:0,55,421	1/1:20,0:20:32.83:256,33,0	0/0:5,0:4:11.98:0,12,102	0/0:11,0:11:14.97:0,15,121	1/1:22,0:20:29.01:212,29,0	1/1:19,0:18:41.11:302,41,0	1/1:24,0:24:44.98:428,45,0	0/0:9,0:9:11.98:0,12,97	1/1:20,0:20:47.66:424,48,0	1/1:21,0:20:3.01:36,3,0	0/0:11,0:8:23.74:0,24,163	0/0:24,0:21:40.11:0,40,288	0/0:16,0:15:20.88:0,21,162	0/0:32,0:26:50.33:0,50,398	1/1:14,0:13:27.75:213,28,0	1/1:12,0:12:14.09:99,14,0	1/1:29,0:26:48.71:339,49,0	0/0:15,0:15:14.98:0,15,125	0/0:23,0:23:45.43:0,45,276	0/0:15,0:13:15.51:0,16,119	0/0:9,0:6:8.86:0,9,59
chr10	41371373	.	AG	A	2938.90	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=10.870;DP=663;FS=4.007;HRun=8;HaplotypeScore=65.8881;InbreedingCoeff=0.9927;MQ=77.12;MQ0=0;MQRankSum=-2.947;QD=22.96;ReadPosRankSum=2.253;VQSLOD=4.5210;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,105,1266	0/0:14,0:14:36.11:0,36,427	0/0:24,0:25:42.76:0,43,622	0/0:15,0:15:33.06:0,33,371	0/0:22,0:22:63.19:0,63,758	0/0:25,0:25:72.22:0,72,870	0/0:25,0:25:63.18:0,63,750	0/0:22,0:22:51.01:0,51,580	0/0:26,0:26:75.21:0,75,884	1/1:2,41:43:99:1166,123,0	1/1:2,15:17:44.97:414,45,0	0/0:21,0:21:60.17:0,60,712	0/0:16,0:16:45.11:0,45,517	0/0:27,0:27:75.20:0,75,880	1/1:2,29:31:75.12:724,75,0	0/0:20,0:20:57.17:0,57,679	0/0:23,0:23:63.18:0,63,749	1/1:1,16:17:45.07:434,45,0	0/0:22,0:23:60.05:0,60,703	0/0:21,0:21:57.17:0,57,678	0/0:36,0:36:93.21:0,93,1053	0/0:24,0:24:63.19:0,63,760	0/0:15,0:15:36.11:0,36,434	0/0:32,0:32:90.28:0,90,1087	1/1:4,16:20:39.06:376,39,0	0/0:20,0:20:48.13:0,48,566	0/0:33,0:33:96.26:0,96,1124	0/0:8,0:7:12.02:0,12,133
chr10	41372542	.	G	GT	2038.12	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-7.058;DP=624;FS=3.661;HRun=8;HaplotypeScore=61.2143;InbreedingCoeff=0.9792;MQ=79.13;MQ0=0;MQRankSum=-0.205;QD=25.80;ReadPosRankSum=1.109;VQSLOD=4.5777;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:56.90:0,57,503	0/0:11,0:11:30.46:0,30,267	0/0:26,0:25:38.05:0,38,357	0/0:18,0:18:39.16:0,39,342	0/0:25,0:25:60.02:0,60,549	0/0:30,0:30:86.96:0,87,778	0/0:22,0:22:63.02:0,63,572	0/0:30,0:30:80.97:0,81,717	1/1:2,20:24:62.85:686,63,0	0/0:21,0:21:54.90:0,55,494	0/0:21,0:21:53.98:0,54,486	0/0:24,0:24:57.03:0,57,522	1/1:6,21:27:54.16:623,54,0	0/0:18,0:18:38.99:0,39,348	0/0:25,0:25:69.03:0,69,628	0/0:16,0:16:47.99:0,48,429	0/0:23,0:23:50.92:0,51,447	0/0:24,0:24:67.07:0,67,581	0/0:18,0:18:39:0,39,353	0/0:31,0:31:84.04:0,84,768	0/0:4,0:4:9:0,9,82	1/1:1,27:28:79.39:871,79,0	0/0:18,0:18:42.01:0,42,383	0/0:20,0:20:51.01:0,51,461	0/0:24,0:24:63.02:0,63,576	0/0:31,0:31:81.02:0,81,735	0/0:26,0:26:69.02:0,69,631	0/0:15,0:15:45.02:0,45,412
chr10	41372781	.	T	TC	2390.96	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-8.931;DP=668;FS=0.000;HRun=7;HaplotypeScore=80.4678;InbreedingCoeff=0.9903;MQ=75.89;MQ0=0;MQRankSum=-0.536;QD=28.13;ReadPosRankSum=2.873;VQSLOD=4.1894;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,99,938	0/0:6,0:6:14.97:0,15,135	0/0:23,0:23:39.03:0,39,368	0/0:25,0:25:16.99:0,17,355	0/0:23,0:23:57.04:0,57,540	0/0:20,0:20:60.10:0,60,579	0/0:27,0:27:72.10:0,72,689	0/0:28,0:28:75.11:0,75,720	1/1:2,24:26:69.21:831,69,0	0/0:20,0:20:50.91:0,51,476	0/0:21,0:21:54:0,54,504	0/0:19,0:19:28.57:0,29,467	1/1:2,31:33:87.27:1051,87,0	0/0:27,0:28:80.16:0,80,759	0/0:23,0:23:63.08:0,63,600	0/0:20,0:20:54.09:0,54,522	0/0:26,0:26:78.11:0,78,748	0/0:20,0:20:54.09:0,54,521	0/0:25,0:25:69.11:0,69,666	0/0:25,0:25:66.05:0,66,622	0/0:46,0:46:99:0,129,1219	1/1:3,23:26:53.90:652,54,0	0/0:18,0:18:51.07:0,51,489	0/0:25,0:25:63.05:0,63,599	0/0:18,0:18:39.05:0,39,376	0/0:28,0:28:60.13:0,60,593	0/0:16,0:16:48.08:0,48,463	0/0:13,0:13:33.04:0,33,319
chr10	41372934	.	C	CG	26848.94	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-8.000;DP=671;FS=6.660;HRun=0;HaplotypeScore=62.1967;InbreedingCoeff=0.9885;MQ=84.08;MQ0=0;MQRankSum=-9.910;QD=43.24;ReadPosRankSum=6.526;VQSLOD=4.6802;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,39:40:99:1676,105,0	0/0:4,0:4:12.04:0,12,168	0/0:28,0:28:76.03:0,76,976	0/0:18,0:18:46.68:0,47,547	1/1:0,20:20:60.12:927,60,0	1/1:0,30:30:78.27:1245,78,0	1/1:0,23:23:63.21:1006,63,0	1/1:0,27:27:78.15:1133,78,0	1/1:0,26:26:72.25:1149,72,0	1/1:0,36:36:99:1722,108,0	1/1:1,22:23:60.20:958,60,0	1/1:0,25:25:66.23:1053,66,0	1/1:0,29:29:75.26:1197,75,0	1/1:0,21:21:51.17:813,51,0	1/1:0,29:29:72.25:1144,72,0	1/1:0,20:20:57.19:909,57,0	1/1:0,34:34:99:1580,99,0	1/1:0,25:25:69.24:1101,69,0	1/1:0,17:18:54.05:829,54,0	1/1:0,19:19:57.19:908,57,0	1/1:0,27:27:69.24:1099,69,0	1/1:0,28:28:75.26:1197,75,0	1/1:0,20:20:54.18:862,54,0	1/1:0,21:21:60.20:957,60,0	1/1:0,26:26:63.21:1006,63,0	1/1:0,27:27:81.28:1290,81,0	1/1:1,15:15:42.14:656,42,0	1/1:0,11:11:27.09:430,27,0
chr10	41375134	.	C	CTTTGT	2798.80	PASS	AB=0.647;AC=14;AF=0.280;AN=50;BaseQRankSum=10.882;DP=699;FS=0.348;HRun=0;HaplotypeScore=186.7631;InbreedingCoeff=0.2442;MQ=72.03;MQ0=5;MQRankSum=-0.984;QD=8.16;ReadPosRankSum=-4.169;VQSLOD=1.6029;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:34:91.53:0,92,1599	0/0:14,0:14:42.12:0,42,812	0/0:36,0:31:81.20:0,81,1543	0/0:22,0:19:45.82:0,46,902	0/0:27,0:26:81.22:0,81,1590	0/0:15,0:23:66.14:0,66,1071	0/0:19,0:27:71.52:0,72,1246	0/1:44,0:44:18.41:18,0,295	./.	0/0:15,0:33:16.43:0,16,840	0/1:15,0:29:0.45:0,0,744	0/0:10,0:19:54.18:0,54,957	./.	0/0:20,0:20:57.18:0,57,1190	0/1:8,0:27:34.36:34,0,407	0/0:27,0:27:78.25:0,78,1646	0/0:19,0:19:51.17:0,51,1063	0/1:8,0:18:15.91:16,0,252	0/1:2,0:21:99:199,0,109	1/1:2,0:48:99:1231,112,0	0/1:1,0:25:9.84:331,0,10	./.	0/0:9,0:29:47.77:0,48,873	0/0:15,0:25:29.09:0,29,599	0/1:21,0:42:7.82:8,0,962	0/1:9,1:36:99:615,0,162	1/1:6,0:28:21.04:370,21,0	1/1:0,0:25:9.03:134,9,0
chr10	41375973	.	GC	G	2192.99	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.567;DP=672;FS=0.472;HRun=4;HaplotypeScore=110.5645;InbreedingCoeff=0.9961;MQ=83.84;MQ0=0;MQRankSum=-4.194;QD=30.04;ReadPosRankSum=4.125;VQSLOD=3.0405;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,108,1491	0/0:7,0:7:18.06:0,18,252	0/0:29,0:29:68.31:0,68,852	0/0:24,0:23:64.96:0,65,783	0/0:11,0:11:24.08:0,24,334	0/0:16,0:16:48.16:0,48,671	0/0:34,0:34:96.31:0,96,1327	0/0:27,0:27:75.22:0,75,1016	1/1:0,23:23:66.20:792,66,0	0/0:24,0:24:69.22:0,69,950	0/0:14,0:14:39.13:0,39,545	0/0:16,0:16:48.15:0,48,653	1/1:1,28:29:75.23:897,75,0	0/0:28,0:28:78.26:0,78,1089	0/0:35,0:35:99:0,102,1427	0/0:24,1:25:30.21:0,30,831	0/0:37,0:37:99:0,105,1468	0/0:19,0:19:57.19:0,57,798	0/0:23,0:23:63.21:0,63,882	0/0:14,0:14:42.14:0,42,582	0/0:42,0:42:99:0,120,1663	1/1:2,19:21:54.17:647,54,0	0/0:20,0:20:57.16:0,57,761	0/0:25,0:25:72.24:0,72,1005	0/0:21,0:21:57.19:0,57,797	0/0:29,0:29:87.28:0,87,1201	0/0:29,0:28:87.25:0,87,1192	0/0:13,0:13:36.12:0,36,504
chr10	41376224	.	GTGTGTGTGTGTGTGTGTGTGTA	G	2916.19	PASS	AB=0.955;AC=23;AF=0.411;AN=56;BaseQRankSum=3.699;DP=513;FS=3.661;HRun=0;HaplotypeScore=223.8168;InbreedingCoeff=0.4169;MQ=50.49;MQ0=21;MQRankSum=-4.141;QD=11.26;ReadPosRankSum=-0.427;VQSLOD=2.6791;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:78.23:0,78,4793	0/0:9,0:9:21.54:0,22,1835	0/0:19,0:7:18.05:0,18,301	0/0:25,0:16:35.83:0,36,630	0/0:10,0:8:6.02:0,6,351	0/0:8,0:7:15.03:0,15,849	0/0:25,0:25:41.16:0,41,2137	1/1:11,0:10:9.77:113,10,0	1/1:24,0:24:12.04:337,12,0	0/1:13,0:13:5.16:5,0,226	0/0:14,0:14:0.47:0,0,1	0/0:22,0:21:18.95:0,19,1631	1/1:25,0:23:5.23:277,5,0	0/0:14,0:14:30.05:0,30,1432	1/1:19,0:19:5.95:99,6,0	0/0:13,0:12:11.56:0,12,1207	0/0:24,0:24:55.54:0,56,3468	0/1:11,0:11:32.76:151,0,33	0/1:11,0:10:0.40:72,0,0	1/1:4,12:16:5.63:290,6,0	1/1:29,0:27:17.28:221,17,0	0/1:21,0:21:17.93:113,0,18	0/1:13,0:12:5.97:6,0,602	0/0:34,0:33:26.88:0,27,888	0/1:18,0:18:99:142,0,121	0/1:12,10:21:23.89:371,0,24	1/1:8,13:21:17.74:723,18,0	1/1:1,4:4:3.01:180,3,0
chr10	41376226	.	GTGTGTGTGTGTGTGTGTGTA	G	3221.02	PASS	AB=0.989;AC=29;AF=0.518;AN=56;BaseQRankSum=2.658;DP=506;FS=7.431;HRun=0;HaplotypeScore=210.4879;InbreedingCoeff=0.5183;MQ=50.83;MQ0=21;MQRankSum=-2.562;QD=11.76;ReadPosRankSum=-2.077;VQSLOD=1.6612;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:81.19:0,81,4211	0/0:10,0:10:24.34:0,24,1670	0/0:19,0:9:23.94:0,24,258	0/0:23,0:15:35.82:0,36,519	0/0:9,0:7:6.02:0,6,300	0/1:10,0:9:31.42:31,0,670	0/0:26,0:26:18.83:0,19,1772	1/1:11,0:10:11.13:115,11,0	1/1:6,15:21:12.04:500,12,0	0/1:13,0:13:20.90:113,0,21	0/1:15,0:15:0:0,0,1	0/0:22,0:21:18.92:0,19,1249	1/1:12,14:24:5.70:310,6,0	0/0:14,0:14:5.95:0,6,1155	1/1:18,0:18:4.57:110,5,0	0/0:13,0:12:11.56:0,12,1053	0/0:24,0:24:55.53:0,56,3033	1/1:11,0:11:6.02:212,6,0	1/1:10,0:9:4.06:71,4,0	1/1:14,0:14:5.63:222,6,0	1/1:28,0:26:21.93:210,22,0	1/1:4,15:19:2.62:165,3,0	0/1:13,0:12:25.93:26,0,416	0/0:34,0:33:23.80:0,24,595	0/1:17,1:18:1.59:260,0,2	1/1:22,0:21:4.03:307,4,0	1/1:20,0:20:17.74:608,18,0	1/1:5,0:4:3.01:146,3,0
chr10	41376228	.	GTGTGTGTGTGTGTGTGTA	G	3514.73	PASS	AB=0.906;AC=31;AF=0.554;AN=56;BaseQRankSum=1.620;DP=498;FS=7.155;HRun=0;HaplotypeScore=191.1784;InbreedingCoeff=0.4714;MQ=49.72;MQ0=21;MQRankSum=-2.772;QD=12.04;ReadPosRankSum=-1.956;VQSLOD=1.2713;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:81.19:0,81,3663	0/0:10,0:10:24.34:0,24,1483	0/0:20,0:10:29.31:0,29,266	0/0:23,0:14:35.61:0,36,421	0/0:9,0:7:6.02:0,6,246	0/1:11,0:10:72.79:73,0,589	0/1:27,0:27:28.41:28,0,1425	1/1:9,0:8:12.15:116,12,0	1/1:20,1:21:12.04:445,12,0	1/1:13,0:13:8.82:165,9,0	0/0:4,11:15:0.47:0,0,2	0/0:22,0:21:4.89:0,5,834	1/1:26,0:24:6.28:262,6,0	0/1:14,0:14:21.44:21,0,927	0/1:2,15:17:4.06:146,0,4	0/0:12,0:11:11.07:0,11,904	0/0:22,0:22:52.51:0,53,2581	1/1:2,10:12:6.02:303,6,0	1/1:9,0:9:6.24:74,6,0	1/1:14,0:14:5.56:194,6,0	1/1:25,0:23:21.97:196,22,0	1/1:19,0:19:2.96:132,3,0	0/1:13,0:12:25.98:26,0,371	0/0:36,0:35:20.79:0,21,453	1/1:18,0:18:20.53:341,21,0	1/1:21,0:20:26.81:305,27,0	1/1:17,0:17:17.74:553,18,0	1/1:5,0:4:3.01:132,3,0
chr10	41376236	.	GTGTGTGTGTA	G	3447.40	PASS	AB=0.987;AC=38;AF=0.679;AN=56;BaseQRankSum=0.503;DP=454;FS=0.000;HRun=0;HaplotypeScore=133.7727;InbreedingCoeff=0.3494;MQ=57.15;MQ0=18;MQRankSum=-4.014;QD=10.84;ReadPosRankSum=0.198;VQSLOD=2.3785;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:92.96:0,93,1742	0/0:12,0:12:33.31:0,33,840	0/0:27,0:18:41.87:0,42,440	0/0:25,0:17:44:0,44,433	0/0:8,0:6:3.01:0,3,66	0/1:13,0:12:99:140,0,201	0/1:27,0:27:99:158,0,421	1/1:9,0:8:23.92:193,24,0	1/1:16,0:16:11.07:204,11,0	1/1:9,0:9:26.82:210,27,0	0/1:11,0:11:0:0,0,1	0/1:21,2:22:30.23:481,0,30	1/1:16,0:15:5.48:151,5,0	0/1:15,0:15:67.79:68,0,346	1/1:15,0:15:3.01:77,3,0	0/1:12,0:11:38.84:39,0,300	0/0:22,0:22:0.38:0,0,1003	1/1:10,0:10:6.02:153,6,0	1/1:6,0:5:14.88:109,15,0	1/1:12,0:12:5.05:84,5,0	1/1:21,0:19:23.19:187,23,0	1/1:15,0:15:2.61:76,3,0	1/1:13,0:13:14.35:117,14,0	1/1:8,23:30:6.02:189,6,0	1/1:13,0:13:17.51:158,18,0	1/1:12,0:11:26.82:250,27,0	1/1:14,0:14:17.27:329,17,0	1/1:5,0:4:3.01:76,3,0
chr10	41376796	.	T	TTTTA	1448.08	PASS	AC=32;AF=0.889;AN=36;BaseQRankSum=-1.797;DP=252;FS=2.351;HRun=0;HaplotypeScore=43.6314;InbreedingCoeff=0.2676;MQ=76.75;MQ0=1;MQRankSum=0.501;QD=8.04;ReadPosRankSum=-2.445;VQSLOD=1.5941;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:3.01:0,3,44	1/1:2,1:3:3.01:70,3,0	./.	./.	1/1:5,1:6:3.01:70,3,0	1/1:6,5:11:12.04:279,12,0	./.	1/1:28,0:28:5.42:23,5,0	1/1:7,0:7:3.01:51,3,0	1/1:12,0:14:6.02:104,6,0	./.	0/0:7,0:10:6.01:0,6,56	1/1:8,0:11:6.02:104,6,0	1/1:7,1:8:3.01:69,3,0	1/1:4,0:6:3.01:39,3,0	./.	1/1:6,5:12:9.03:209,9,0	1/1:7,0:7:5.05:47,5,0	1/1:20,0:19:9.03:119,9,0	./.	1/1:11,0:12:6.02:88,6,0	./.	./.	./.	1/1:15,0:16:9.03:141,9,0	1/1:6,0:6:3.01:30,3,0	1/1:12,0:13:6.02:103,6,0	./.
chr10	41376917	.	TA	T	2017.40	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=3.821;DP=363;FS=2.172;HRun=6;HaplotypeScore=64.0523;InbreedingCoeff=0.9787;MQ=82.55;MQ0=0;MQRankSum=-0.735;QD=26.54;ReadPosRankSum=1.717;VQSLOD=4.1800;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:45.15:0,45,592	0/0:7,0:7:21.07:0,21,276	0/0:9,0:9:9.66:0,10,207	0/0:12,0:12:24.03:0,24,283	0/0:19,0:19:57.15:0,57,701	0/0:16,0:16:48.16:0,48,632	0/0:11,0:11:33.10:0,33,421	0/0:24,0:24:72.23:0,72,947	0/0:0,0:9:25.88:0,26,133	1/1:1,17:18:51.13:548,51,0	1/1:1,16:17:45.11:484,45,0	0/0:8,0:8:21.07:0,21,276	0/0:0,0:9:20.13:0,20,103	0/0:14,0:14:42.14:0,42,552	1/1:0,10:10:27.07:290,27,0	0/0:8,0:8:24.06:0,24,301	0/0:17,0:17:51.14:0,51,654	1/1:2,15:17:45.11:483,45,0	0/0:13,0:13:36.10:0,36,448	0/0:16,0:16:48.16:0,48,632	0/0:7,0:7:21.07:0,21,276	0/0:1,0:13:34.50:0,35,177	0/0:12,0:12:36.10:0,36,458	0/0:10,0:10:27.09:0,27,355	1/1:0,14:14:36.09:387,36,0	0/0:18,0:18:54.17:0,54,697	0/0:14,0:14:42.14:0,42,552	0/0:5,0:5:15.05:0,15,197
chr10	41377550	.	TTG	T	590.81	PASS	AB=0.987;AC=28;AF=0.500;AN=56;BaseQRankSum=5.314;DP=515;FS=7.151;HRun=0;HaplotypeScore=127.7870;InbreedingCoeff=0.4438;MQ=60.90;MQ0=5;MQRankSum=-1.926;QD=2.00;ReadPosRankSum=3.904;VQSLOD=1.8246;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:39.11:0,39,498	0/0:12,0:12:23.04:0,23,528	0/0:23,0:12:30.10:0,30,510	0/0:25,0:14:36.09:0,36,553	1/1:24,0:24:6.44:30,6,0	0/0:9,0:9:2.84:0,3,9	1/1:17,0:17:5.78:31,6,0	0/0:37,0:37:34.09:0,34,533	0/0:19,0:19:50.26:0,50,589	1/1:15,0:15:17.35:128,17,0	1/1:22,0:22:7.84:53,8,0	1/1:14,2:16:5.62:37,6,0	0/0:15,0:14:39.13:0,39,533	1/1:17,0:17:3.45:21,3,0	0/1:20,0:20:3.16:3,0,6	1/1:15,1:16:11.99:108,12,0	1/1:12,1:13:7.43:50,7,0	0/1:15,0:15:15.86:36,0,16	0/1:9,0:9:6.75:21,0,7	1/1:26,0:26:18.31:138,18,0	0/1:11,0:10:12.26:12,0,25	0/0:17,0:17:51.15:0,51,714	0/0:19,0:19:2.99:0,3,26	1/1:21,1:22:2.48:24,2,0	0/1:19,0:19:14.71:15,0,30	0/0:25,0:25:3.25:0,3,304	0/1:22,2:24:4.36:25,0,4	1/1:9,0:9:8.06:42,8,0
chr10	41377552	.	GTTCTCTCT	G	2515.35	PASS	AB=0.916;AC=29;AF=0.518;AN=56;BaseQRankSum=-5.497;DP=498;FS=8.813;HRun=0;HaplotypeScore=148.9928;InbreedingCoeff=0.0577;MQ=58.68;MQ0=5;MQRankSum=1.944;QD=6.74;ReadPosRankSum=-2.195;VQSLOD=1.0651;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:35.48:0,35,328	0/0:11,0:12:33.07:0,33,1033	0/0:23,0:11:27.30:0,27,784	0/0:24,0:13:35.64:0,36,881	1/1:14,1:24:20.96:415,21,0	0/1:8,1:10:7.33:18,0,7	1/1:1,0:16:8.99:113,9,0	0/1:32,0:32:99:151,0,1692	0/0:18,0:18:50.11:0,50,396	0/1:12,0:16:53.26:170,0,53	0/1:18,0:22:52.77:89,0,53	0/1:12,1:16:3.15:109,0,3	0/0:15,0:14:38.74:0,39,475	1/1:1,15:17:5.35:30,5,0	0/1:19,0:20:61.98:127,0,62	1/1:1,11:15:11.98:114,12,0	1/1:12,0:13:31.18:400,31,0	0/1:12,0:13:43.99:44,0,59	0/1:8,0:8:87.39:101,0,87	0/1:24,0:26:68.21:68,0,417	0/1:10,0:9:55.90:56,0,136	0/0:16,0:16:47.68:0,48,440	1/1:14,1:18:20.82:163,21,0	1/1:22,0:22:5.62:149,6,0	0/1:14,0:17:99:110,0,109	0/1:25,0:25:99:138,0,1243	0/1:23,0:23:51.95:52,0,248	1/1:9,0:9:13.53:87,14,0
chr10	41377553	.	T	TTCTCTCTCTCTCTCTCTC	2400.37	PASS	AB=1.000;AC=21;AF=0.389;AN=54;BaseQRankSum=5.529;DP=526;FS=26.602;HRun=0;HaplotypeScore=255.6543;InbreedingCoeff=0.0770;MQ=56.08;MQ0=6;MQRankSum=-5.214;QD=8.36;ReadPosRankSum=-3.120;VQSLOD=0.8924;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:16,5:21:3.01:216,3,0	0/0:12,0:12:21.07:0,21,977	0/0:23,0:10:12.51:0,13,275	0/0:23,0:13:12.04:0,12,426	0/0:23,0:23:8.29:0,8,95	1/1:9,0:9:2.74:12,3,0	0/1:17,0:17:2.28:2,0,4	0/0:33,0:33:37.79:0,38,943	1/1:26,0:26:12.04:653,12,0	0/1:19,0:18:53.10:53,0,375	0/0:23,0:23:11.83:0,12,427	0/1:16,0:16:58.88:59,0,137	1/1:19,0:18:15.05:917,15,0	0/1:17,0:17:30.54:87,0,31	1/1:21,0:21:0.19:14,0,0	0/1:15,0:15:99:126,0,122	0/1:13,0:13:99:142,0,206	0/0:13,0:13:0.75:0,1,62	0/0:8,0:8:5.23:0,5,140	0/1:27,0:27:61.61:62,0,593	0/0:10,0:9:6.02:0,6,200	./.	0/0:18,0:18:6.02:0,6,122	0/0:22,0:22:2.51:0,3,152	0/1:18,0:18:52.32:52,0,62	0/1:26,0:26:54.98:55,0,941	1/1:23,0:23:6.02:106,6,0	0/0:10,0:10:0.33:0,0,1
chr10	41377569	.	C	CTGTGTGTGTGTG	2029.41	PASS	AB=1.000;AC=28;AF=0.500;AN=56;BaseQRankSum=8.868;DP=504;FS=0.000;HRun=0;HaplotypeScore=206.5647;InbreedingCoeff=-0.0704;MQ=45.95;MQ0=8;MQRankSum=-7.530;QD=5.70;ReadPosRankSum=3.864;VQSLOD=2.3461;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:22:18.71:19,0,413	0/0:10,0:10:27.09:0,27,972	0/0:25,0:8:21.54:0,22,705	0/0:24,0:10:24.07:0,24,732	1/1:24,0:24:12.48:148,12,0	1/1:5,5:11:3.48:177,3,0	1/1:17,0:17:9.03:230,9,0	0/0:30,0:29:81.23:0,81,2836	0/1:26,0:26:78.90:79,0,320	0/1:17,0:15:68.39:68,0,466	0/0:27,0:27:8.70:0,9,360	1/1:14,0:14:11.26:75,11,0	0/1:21,0:20:99:139,0,442	0/1:19,0:19:3.61:23,0,4	1/1:22,0:22:5.96:134,6,0	1/1:13,0:13:14.37:210,14,0	0/1:11,0:11:15.20:115,0,15	0/1:13,0:13:40.59:100,0,41	0/1:8,0:8:24.33:24,0,551	0/0:25,0:25:11.19:0,11,843	0/0:7,0:6:9.03:0,9,296	0/1:15,0:15:35.97:36,0,111	0/1:14,0:14:9.09:28,0,9	1/1:18,0:18:1.25:4,1,0	0/1:19,0:19:99:134,0,110	0/1:23,0:23:99:325,0,1918	0/1:22,0:22:38:38,0,205	0/1:6,0:6:39.93:98,0,40
chr10	41377571	.	C	CTGTGTGTGTGTGTGTGTG	5073.69	PASS	AB=1.000;AC=32;AF=0.571;AN=56;BaseQRankSum=8.656;DP=496;FS=2.494;HRun=0;HaplotypeScore=245.3625;InbreedingCoeff=-0.0824;MQ=46.91;MQ0=8;MQRankSum=-7.560;QD=12.72;ReadPosRankSum=5.695;VQSLOD=3.4238;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:21,0:21:99:125,0,505	0/0:10,0:10:27.09:0,27,1256	0/0:26,0:9:20.97:0,21,651	0/0:24,0:12:24.08:0,24,772	1/1:23,0:23:13.45:245,13,0	1/1:10,0:10:6.49:194,6,0	1/1:13,0:13:8.06:156,8,0	0/0:29,0:28:37.79:0,38,2378	0/1:26,0:26:99:268,0,484	0/1:16,0:14:99:127,0,137	0/1:27,0:27:25.18:25,0,94	1/1:13,0:13:12.04:369,12,0	0/1:21,0:20:99:280,0,381	0/1:20,0:20:3.22:214,0,3	1/1:19,0:19:6.02:184,6,0	1/1:13,0:13:15.05:587,15,0	1/1:10,0:10:24.08:684,24,0	0/1:13,0:13:27.17:189,0,27	0/1:9,0:9:99:162,0,312	0/1:26,0:26:43.20:43,0,503	0/0:7,0:6:9.03:0,9,221	0/1:15,0:15:43.49:43,0,63	1/1:15,0:15:6.02:191,6,0	1/1:3,10:17:3.48:71,3,0	0/1:19,0:19:57.05:210,0,57	0/1:24,0:24:99:425,0,1388	0/1:22,0:22:99:163,0,140	0/1:6,0:6:16.98:118,0,17
chr10	41377573	.	C	CTCTGTGTGTGTG	4370.20	PASS	AB=0.975;AC=35;AF=0.625;AN=56;BaseQRankSum=8.378;DP=494;FS=0.550;HRun=0;HaplotypeScore=195.2673;InbreedingCoeff=0.0909;MQ=46.85;MQ0=8;MQRankSum=-5.886;QD=11.53;ReadPosRankSum=4.099;VQSLOD=3.7743;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:2.74:0,3,523	0/0:11,0:11:27.07:0,27,890	0/0:27,0:10:23.70:0,24,350	0/0:26,0:12:23.67:0,24,568	1/1:22,0:22:12.08:95,12,0	1/1:12,0:11:6.49:210,6,0	1/1:15,0:15:12.03:219,12,0	0/0:29,0:28:43.77:0,44,1510	0/1:26,0:26:99:180,0,163	1/1:15,0:13:12.01:496,12,0	0/1:17,8:27:21.46:114,0,21	1/1:11,0:11:12.02:146,12,0	0/1:21,0:20:99:211,0,346	0/1:20,0:20:0.40:84,0,0	1/1:18,0:19:6.02:282,6,0	1/1:13,0:13:11.35:154,11,0	0/1:9,0:9:0.73:128,0,1	0/1:13,0:13:3.74:383,0,4	0/1:8,0:8:99:201,0,166	0/1:25,0:25:33.28:33,0,289	0/1:8,0:7:15.32:15,0,112	1/1:15,0:15:3.48:62,3,0	1/1:15,0:15:6.02:73,6,0	1/1:14,0:15:3:26,3,0	1/1:19,0:19:12.02:447,12,0	0/1:24,0:24:99:483,0,806	0/1:22,0:22:32.95:169,0,33	1/1:5,0:5:3.01:158,3,0
chr10	41377575	.	C	CTGTGTGTGTGTG	5334.77	PASS	AB=1.000;AC=37;AF=0.661;AN=56;BaseQRankSum=6.335;DP=492;FS=0.562;HRun=0;HaplotypeScore=188.3882;InbreedingCoeff=0.2333;MQ=46.76;MQ0=9;MQRankSum=-6.111;QD=14.19;ReadPosRankSum=4.812;VQSLOD=3.7354;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:19.15:0,19,642	0/0:11,0:11:27.09:0,27,946	0/0:28,0:10:26.26:0,26,406	0/0:26,0:12:24.05:0,24,572	1/1:21,0:21:9.48:85,9,0	1/1:13,0:12:6.02:249,6,0	1/1:16,0:16:12.04:276,12,0	0/0:29,0:28:42.34:0,42,1304	0/1:26,0:26:86.08:86,0,209	1/1:16,0:14:29.20:698,29,0	1/1:25,1:26:9.62:173,10,0	1/1:11,0:11:12.04:216,12,0	0/1:19,0:18:99:137,0,442	1/1:20,0:20:9.03:153,9,0	1/1:4,14:19:6.02:316,6,0	1/1:13,0:13:11.36:223,11,0	1/1:9,0:9:14.42:334,14,0	1/1:12,1:13:7.07:448,7,0	0/1:8,0:8:99:244,0,105	0/1:25,0:25:33.28:33,0,201	0/1:8,0:7:36.14:36,0,89	0/1:14,0:14:10.32:38,0,10	1/1:15,0:15:6.02:108,6,0	0/1:15,0:15:0:1,0,0	1/1:6,8:19:12.02:517,12,0	0/1:24,0:24:99:582,0,639	0/1:21,0:21:32.96:205,0,33	1/1:5,0:5:3.01:176,3,0
chr10	41377577	.	C	CTGTGTGTGTGTGTG	6395.92	PASS	AB=1.000;AC=42;AF=0.750;AN=56;BaseQRankSum=5.373;DP=485;FS=2.731;HRun=0;HaplotypeScore=193.3652;InbreedingCoeff=0.2808;MQ=46.35;MQ0=9;MQRankSum=-4.872;QD=16.19;ReadPosRankSum=4.677;VQSLOD=3.6773;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:10.86:0,11,724	0/0:12,0:12:33.08:0,33,1021	0/0:31,0:12:26.12:0,26,404	0/0:24,0:11:23.91:0,24,412	1/1:20,0:20:5.68:28,6,0	1/1:13,0:12:9.02:286,9,0	1/1:16,0:16:17.97:306,18,0	0/1:28,0:27:62.55:63,0,479	0/1:25,0:25:99:113,0,254	1/1:5,0:14:32.57:830,33,0	1/1:24,1:25:10.20:163,10,0	1/1:11,0:11:12.04:257,12,0	0/1:19,0:18:99:123,0,453	1/1:20,0:20:9.03:199,9,0	1/1:17,1:18:6.02:307,6,0	1/1:13,0:13:12:261,12,0	1/1:8,0:8:16.07:404,16,0	1/1:3,9:13:8.99:454,9,0	1/1:8,0:8:11.77:364,12,0	1/1:25,0:25:15.19:104,15,0	0/1:7,0:6:15.98:80,0,16	0/1:14,0:14:35.21:40,0,35	1/1:15,0:15:6.02:107,6,0	1/1:13,0:13:3.46:25,3,0	1/1:15,0:16:12.04:482,12,0	0/1:24,0:24:99:859,0,199	1/1:5,1:23:5.97:347,6,0	1/1:5,0:5:3.01:194,3,0
chr10	41377579	.	C	CTGTGTGTGTGTGTGTGTG	12356.51	PASS	AB=1.000;AC=45;AF=0.804;AN=56;BaseQRankSum=0.986;DP=582;FS=12.136;HRun=0;HaplotypeScore=275.7281;InbreedingCoeff=0.3338;MQ=42.45;MQ0=10;MQRankSum=-4.592;QD=23.95;ReadPosRankSum=3.301;VQSLOD=1.7242;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:23:9.60:10,0,841	0/0:12,0:12:33.09:0,33,1071	0/0:30,0:11:15.05:0,15,381	0/0:24,0:11:9.02:0,9,285	1/1:34,0:34:0.59:1,1,0	1/1:18,0:17:9.97:343,10,0	1/1:26,0:26:20.10:509,20,0	1/1:39,0:36:49.07:1171,49,0	0/1:26,0:26:99:203,0,341	1/1:24,0:21:48.16:1514,48,0	1/1:29,0:29:8.99:156,9,0	1/1:17,0:17:14.74:626,15,0	0/1:16,0:17:99:200,0,491	0/1:21,0:21:0.21:306,0,0	1/1:21,0:21:6.02:258,6,0	1/1:15,0:15:15.05:564,15,0	1/1:10,0:10:21.07:804,21,0	1/1:11,0:11:9.03:405,9,0	1/1:5,3:8:11.06:451,11,0	1/1:16,13:31:7.95:134,8,0	1/1:9,0:8:6.02:180,6,0	0/1:13,0:14:47.21:47,0,61	1/1:22,0:22:5.20:191,5,0	1/1:24,0:24:2.07:47,2,0	1/1:20,0:20:12.04:427,12,0	1/1:15,11:31:57.18:2529,57,0	1/1:18,1:19:15.03:702,15,0	1/1:2,5:7:9.03:576,9,0
chr10	41379185	.	T	TGGG	11565.98	PASS	AB=0.582;AC=40;AF=0.714;AN=56;BaseQRankSum=7.141;DP=287;FS=6.617;HRun=3;HaplotypeScore=67.8749;InbreedingCoeff=0.7778;MQ=97.73;MQ0=0;MQRankSum=-9.691;QD=52.10;ReadPosRankSum=2.378;VQSLOD=4.3264;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:4:8.93:0,9,133	0/0:6,0:6:12.04:0,12,191	0/0:18,0:18:48.14:0,48,734	0/0:18,0:18:46.71:0,47,712	1/1:0,8:8:15.05:339,15,0	1/1:3,5:8:15.05:312,15,0	1/1:1,3:4:9.03:203,9,0	1/1:5,15:21:51.17:1096,51,0	0/0:5,0:5:12.04:0,12,192	1/1:1,12:13:36.12:812,36,0	1/1:1,7:8:18.06:385,18,0	1/1:1,8:9:27.09:602,27,0	0/0:6,0:6:15.05:0,15,240	1/1:0,5:5:15.05:339,15,0	1/1:2,10:12:36.12:804,36,0	0/1:5,8:14:11.87:681,0,12	1/1:3,12:15:36.12:804,36,0	1/1:1,9:10:24.08:544,24,0	1/1:4,7:11:30.10:654,30,0	1/1:3,12:15:45.15:943,45,0	1/1:1,6:7:5.50:95,6,0	0/0:8,0:8:24.08:0,24,384	1/1:5,4:9:15.05:317,15,0	1/1:1,6:7:12.04:227,12,0	1/1:3,12:15:33.11:729,33,0	1/1:1,13:14:39.13:883,39,0	1/1:0,7:7:21.07:475,21,0	0/1:2,8:10:5.87:322,0,6
chr10	41379199	.	CTTTATT	C	1363.17	PASS	AB=0.888;AC=26;AF=0.464;AN=56;BaseQRankSum=1.875;DP=193;FS=1.585;HRun=0;HaplotypeScore=84.1399;InbreedingCoeff=-0.2156;MQ=86.46;MQ0=0;MQRankSum=-3.314;QD=8.97;ReadPosRankSum=-1.654;VQSLOD=1.5580;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:2,0:2:3:0,3,26	0/0:4,0:4:12.03:0,12,240	0/0:9,0:9:20.94:0,21,180	0/0:9,0:9:23.72:0,24,192	0/1:7,1:8:25.40:74,0,25	0/1:4,0:7:52.93:53,0,103	1/1:2,0:2:5.85:34,6,0	0/1:23,0:23:99:170,0,473	0/0:4,0:4:12.02:0,12,173	0/1:6,2:8:26.67:111,0,27	0/1:5,0:5:23.61:47,0,24	0/1:6,1:7:58.91:59,0,212	0/0:5,0:5:15.01:0,15,137	0/1:2,1:4:29.95:30,0,85	1/1:3,5:8:23.80:178,24,0	0/1:5,3:9:61.70:121,0,62	0/1:7,1:11:73.88:74,0,261	0/1:5,1:6:29.08:29,0,155	0/1:3,0:4:28.96:29,0,103	1/1:8,1:10:29.34:181,29,0	1/1:3,0:3:0.47:1,0,0	0/0:8,0:8:24.02:0,24,220	0/1:4,0:4:27.95:28,0,142	1/1:2,1:3:8.84:58,9,0	0/1:1,2:8:43.91:44,0,271	0/1:7,3:10:11.53:154,0,12	0/1:4,0:6:4.97:5,0,164	0/1:3,2:6:53.96:54,0,126
chr10	41379200	.	T	TTA	499.28	PASS	AB=0.854;AC=17;AF=0.304;AN=56;BaseQRankSum=1.625;DP=210;FS=0.955;HRun=0;HaplotypeScore=80.0130;InbreedingCoeff=-0.3161;MQ=83.24;MQ0=0;MQRankSum=-4.441;QD=3.75;ReadPosRankSum=0.914;VQSLOD=2.1955;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:1,0:2:2.99:0,3,23	0/1:2,0:4:18.50:18,0,71	0/0:9,0:9:21.07:0,21,279	0/0:9,0:9:23.81:0,24,296	0/0:9,0:9:14.76:0,15,116	0/1:5,0:8:41.95:42,0,66	0/0:2,0:2:6.01:0,6,56	0/1:28,0:27:99:132,0,313	0/1:4,0:5:6.75:7,0,74	0/0:8,0:8:20.77:0,21,157	0/0:6,0:6:11.97:0,12,103	0/0:7,0:7:17.95:0,18,157	0/1:7,0:6:28.14:28,0,151	0/1:3,1:4:16.70:17,0,46	0/1:9,0:9:33.62:34,0,135	0/1:8,1:9:4.34:4,0,160	0/1:9,3:12:59.41:59,0,134	0/1:7,0:7:12.26:12,0,82	0/1:4,0:5:45.57:46,0,60	0/1:10,0:10:19.09:19,0,105	1/1:4,0:4:3.47:28,3,0	0/0:8,0:8:21.06:0,21,273	0/0:4,0:4:11.99:0,12,106	0/0:3,0:3:8.98:0,9,77	0/1:3,5:8:44.13:124,0,44	0/0:10,0:10:26.29:0,26,190	0/1:5,0:7:67.47:71,0,67	0/1:5,0:6:12.02:12,0,77
chr10	41381585	.	CTA	C	14290.42	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=15.649;DP=695;FS=3.934;HRun=0;HaplotypeScore=84.7446;InbreedingCoeff=0.9990;MQ=74.78;MQ0=2;MQRankSum=-2.081;QD=33.31;ReadPosRankSum=-0.637;VQSLOD=6.5026;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,105,1791	0/0:12,0:12:33.11:0,33,566	0/0:15,0:15:30.10:0,30,499	0/0:10,0:10:21.07:0,21,360	1/1:2,14:16:42.14:552,42,0	1/1:3,20:23:57.19:749,57,0	1/1:5,28:33:75.24:986,75,0	1/1:3,26:29:75.23:969,75,0	0/0:22,0:22:60.21:0,60,1029	1/1:5,23:28:69.22:905,69,0	1/1:1,22:23:57.19:749,57,0	0/0:28,0:28:84.29:0,84,1432	0/0:35,0:35:96.30:0,96,1597	1/1:3,30:32:90.29:1182,90,0	1/1:2,26:28:72.23:947,72,0	0/0:32,0:32:87.30:0,87,1492	1/1:3,22:25:63.20:828,63,0	1/1:4,19:23:54.18:710,54,0	1/1:2,15:17:42.11:523,42,0	1/1:4,20:24:57.18:749,57,0	1/1:2,41:43:99:1538,117,0	0/0:26,0:26:78.27:0,78,1338	0/0:21,0:21:48.16:0,48,814	0/0:24,0:24:69.24:0,69,1173	1/1:2,24:25:66.21:868,66,0	1/1:0,24:23:66.20:851,66,0	1/1:1,23:24:66.21:868,66,0	1/1:2,8:10:24.08:315,24,0
chr10	41382129	.	C	CT	1756.41	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=-7.539;DP=636;FS=1.768;HRun=6;HaplotypeScore=58.2143;InbreedingCoeff=0.8350;MQ=72.85;MQ0=0;MQRankSum=0.213;QD=21.16;ReadPosRankSum=1.143;VQSLOD=3.0027;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:90.12:0,90,888	0/0:13,0:13:33.07:0,33,336	0/1:16,0:16:19.26:19,0,103	0/0:10,0:10:17.47:0,17,146	0/0:23,0:23:48.09:0,48,484	0/0:28,0:28:78.16:0,78,784	0/0:15,0:15:42.10:0,42,428	0/0:34,0:34:81.11:0,81,794	0/0:24,0:24:60.12:0,60,605	0/0:23,0:23:66.14:0,66,669	0/0:21,0:21:54.07:0,54,535	1/1:4,16:20:39.12:491,39,0	0/0:20,0:20:54.12:0,54,550	0/0:29,0:29:78.12:0,78,778	0/0:25,0:25:69.14:0,69,696	0/0:21,0:21:60.13:0,60,606	0/0:28,0:28:69.04:0,69,674	0/0:19,0:19:51.03:0,51,490	0/0:23,0:23:60.12:0,60,603	0/0:32,0:32:90.18:0,90,905	0/0:26,0:26:75.12:0,75,743	0/0:22,0:22:63.10:0,63,632	1/1:1,30:31:81.26:1018,81,0	1/1:1,15:16:30.10:377,30,0	0/0:15,0:15:42.10:0,42,428	0/0:27,0:27:81.16:0,81,816	0/0:34,0:34:90.18:0,90,912	0/0:9,0:9:24.05:0,24,245
chr10	41382668	.	GTGGT	G	11141.02	PASS	AB=0.561;AC=17;AF=0.304;AN=56;BaseQRankSum=16.144;DP=721;FS=4.497;HRun=0;HaplotypeScore=124.9630;InbreedingCoeff=0.9148;MQ=88.43;MQ0=0;MQRankSum=-7.884;QD=46.04;ReadPosRankSum=1.161;VQSLOD=5.6092;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,50:51:99:2204,121,0	0/0:15,0:15:42.14:0,42,1119	0/0:32,0:31:84.26:0,84,2083	0/0:23,0:23:60.09:0,60,1403	0/0:28,0:28:81.24:0,81,2042	0/0:22,0:22:66.23:0,66,1708	0/0:30,0:30:84.29:0,84,2206	1/1:1,22:23:66.18:1131,66,0	0/0:32,0:32:93.28:0,93,2417	0/0:30,0:30:84.28:0,84,2190	0/0:25,0:25:75.26:0,75,1996	0/0:29,0:29:84.29:0,84,2239	0/0:33,0:33:90.29:0,90,2255	0/0:24,0:24:69.22:0,69,1736	0/0:17,0:17:51.17:0,51,1323	1/1:2,21:23:57.20:1060,57,0	0/0:31,0:31:81.26:0,81,2040	0/0:13,0:13:36.11:0,36,874	1/1:2,18:20:48.14:842,48,0	1/1:1,35:36:99:1878,102,0	1/1:2,31:33:78.27:1401,78,0	0/0:25,0:25:75.25:0,75,1893	0/0:12,0:12:36.12:0,36,930	0/0:37,0:37:99:0,108,2833	0/0:21,0:21:63.22:0,63,1646	0/1:5,18:23:99:897,0,100	1/1:1,25:26:72.25:1336,72,0	1/1:0,7:7:21.07:391,21,0
chr10	41383120	.	G	GT	6104.30	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-8.471;DP=652;FS=1.979;HRun=3;HaplotypeScore=60.6484;InbreedingCoeff=0.9950;MQ=65.46;MQ0=0;MQRankSum=-2.129;QD=35.70;ReadPosRankSum=0.205;VQSLOD=5.3305;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,29:29:78.26:1091,78,0	0/0:15,0:15:42.12:0,42,493	0/0:10,0:10:24.03:0,24,268	0/0:7,0:7:14.77:0,15,136	0/0:24,0:24:69.20:0,69,815	1/1:2,22:24:63.21:881,63,0	1/1:4,21:25:63.21:882,63,0	0/0:39,0:38:99:0,111,1323	1/1:0,22:22:60.20:840,60,0	0/0:30,0:30:84.26:0,84,1008	0/0:24,0:24:60.18:0,60,720	0/0:26,0:26:72.19:0,72,841	1/1:1,18:19:48.12:649,48,0	0/0:28,0:28:81.25:0,81,970	0/0:24,0:24:69.20:0,69,816	1/1:2,24:26:66.22:924,66,0	0/0:22,0:22:66.20:0,66,792	0/0:10,0:10:30.09:0,30,360	0/0:30,0:30:81.25:0,81,972	0/0:28,0:28:84.24:0,84,995	0/0:15,0:15:42.10:0,42,479	1/1:1,25:26:63.12:837,63,0	0/0:34,0:34:90.28:0,90,1080	0/0:13,0:13:39.12:0,39,468	0/0:39,0:38:99:0,111,1331	0/0:32,0:32:84.26:0,84,1008	0/0:25,0:25:72.22:0,72,863	0/0:6,0:6:18.05:0,18,215
chr10	41383290	.	G	GATCTCCATGGGCACATGGACACACACATAC	43431.35	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-5.958;DP=683;FS=23.419;HRun=0;HaplotypeScore=506.5196;InbreedingCoeff=0.9536;MQ=63.36;MQ0=0;MQRankSum=-17.078;QD=125.52;ReadPosRankSum=-4.734;VQSLOD=3.6775;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:35,1:40:54.62:2622,55,0	0/0:14,0:14:39.13:0,39,2272	0/0:16,0:16:1.70:0,2,683	0/0:27,0:24:7.52:0,8,1094	0/0:20,0:20:57.20:0,57,3813	1/1:18,1:19:45.05:2895,45,0	1/1:31,0:31:51.49:2261,51,0	1/1:30,0:30:75.26:3454,75,0	1/1:19,1:21:41.17:2928,41,0	0/0:33,0:33:93.31:0,93,5759	0/0:14,0:14:30.10:0,30,2134	0/0:27,0:27:71.01:0,71,4415	1/1:23,0:23:39.02:3165,39,0	0/0:24,0:24:63.08:0,63,3683	0/0:32,0:32:87.30:0,87,5517	1/1:32,0:32:81.21:6305,81,0	0/0:28,0:28:78.27:0,78,4846	0/0:18,0:18:45.14:0,45,3069	1/1:18,0:18:45.15:2564,45,0	1/1:30,3:34:24.38:990,24,0	1/1:10,0:10:11.91:402,12,0	1/1:25,1:26:35.84:1815,36,0	0/0:22,0:22:60.21:0,60,4163	0/0:34,0:34:75.26:0,75,4435	0/0:24,0:24:57.20:0,57,3924	1/1:31,0:31:81.28:7512,81,0	1/1:25,1:26:60.67:5622,61,0	1/1:5,0:5:15.05:895,15,0
chr10	41383342	.	TGC	T	1401.68	PASS	AB=0.983;AC=17;AF=0.304;AN=56;BaseQRankSum=1.911;DP=627;FS=10.810;HRun=0;HaplotypeScore=148.5079;InbreedingCoeff=-0.0055;MQ=54.81;MQ0=27;MQRankSum=6.908;QD=3.99;ReadPosRankSum=8.691;VQSLOD=0.8718;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:18:0.47:0,0,1	0/0:5,0:5:11.99:0,12,190	0/1:58,0:10:17.72:22,0,18	0/0:61,0:11:12.03:0,12,167	0/1:16,1:16:63.48:113,0,63	0/0:24,0:24:9.02:0,9,147	0/0:23,0:23:48.10:0,48,906	0/0:24,0:24:56.03:0,56,403	0/0:16,0:16:18.05:0,18,212	0/1:24,0:22:96.10:96,0,102	1/1:14,0:14:0.02:74,0,0	0/1:25,0:25:34.33:133,0,34	0/0:15,0:15:17.90:0,18,183	0/1:23,1:24:9.51:152,0,10	1/1:22,1:23:1.45:159,1,0	0/0:17,0:17:9.70:0,10,56	0/1:26,0:26:48.90:170,0,49	0/1:19,0:19:25.77:128,0,26	0/0:21,0:17:28.46:0,28,231	0/1:16,0:16:0:0,0,0	0/0:8,0:6:2.74:0,3,12	0/0:21,0:21:6.02:0,6,75	0/1:18,0:17:36.88:37,0,121	1/1:40,1:40:51.25:352,51,0	0/1:24,1:25:57.69:112,0,58	0/0:18,0:18:44.28:0,44,257	0/1:18,0:19:6.65:7,0,76	0/0:4,0:4:7.71:0,8,21
chr10	41383343	.	GCA	G	5658.75	PASS	AB=0.630;AC=34;AF=0.654;AN=52;BaseQRankSum=-2.351;DP=623;FS=3.859;HRun=0;HaplotypeScore=136.3456;InbreedingCoeff=0.6122;MQ=53.78;MQ0=27;MQRankSum=2.031;QD=13.25;ReadPosRankSum=2.400;VQSLOD=4.5621;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/0:5,0:5:9.03:0,9,147	1/1:60,0:10:3.21:13,3,0	0/0:59,0:10:11.79:0,12,117	1/1:5,12:16:24.07:290,24,0	0/0:23,1:24:8.98:0,9,117	0/0:22,1:23:45.11:0,45,709	0/1:8,0:24:47.58:121,0,48	0/0:5,0:16:17.69:0,18,129	1/1:10,13:22:33.94:479,34,0	1/1:3,11:14:24.08:298,24,0	1/1:11,14:25:39.09:468,39,0	0/0:2,0:14:12:0,12,105	1/1:7,17:24:17.88:425,18,0	1/1:7,17:24:48.15:595,48,0	./.	1/1:4,20:24:48.13:595,48,0	1/1:6,13:19:22.82:464,23,0	0/1:10,0:17:20.69:97,0,21	0/1:4,0:16:0:0,0,0	1/1:5,0:6:2.58:14,3,0	0/0:9,0:20:6:0,6,53	1/1:10,10:19:20.65:233,21,0	1/1:4,36:40:78.24:963,78,0	1/1:8,17:25:36.37:423,36,0	0/1:10,0:18:8.36:71,0,8	1/1:11,0:19:11.36:55,11,0	1/1:0,0:4:11.32:55,11,0
chr10	41383358	.	CAG	C	1596.50	PASS	AB=0.985;AC=19;AF=0.352;AN=54;BaseQRankSum=-3.736;DP=617;FS=0.458;HRun=0;HaplotypeScore=150.0560;InbreedingCoeff=0.3658;MQ=42.65;MQ0=34;MQRankSum=7.356;QD=5.13;ReadPosRankSum=5.722;VQSLOD=2.8518;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:20:2.92:22,3,0	0/0:4,0:4:9.03:0,9,165	./.	0/0:52,0:6:5.04:0,5,113	1/1:18,0:15:27.92:143,28,0	0/0:23,0:22:5.80:0,6,115	0/0:25,0:23:45.14:0,45,828	0/0:20,0:19:32.88:0,33,164	0/0:17,0:16:8.65:0,9,68	0/1:24,1:21:38.66:135,0,39	1/1:17,1:18:21.90:100,22,0	0/1:30,1:31:2.27:118,0,2	0/0:19,0:17:5.16:0,5,78	0/1:25,1:26:5.45:148,0,5	0/1:26,0:26:15.14:179,0,15	0/1:19,0:19:8.26:27,0,8	1/1:27,0:27:14.55:198,15,0	0/1:19,0:19:19.94:124,0,20	0/0:22,0:17:31.47:0,31,181	0/0:15,0:15:2.89:0,3,25	0/0:13,0:6:2.60:0,3,10	0/0:19,0:19:5.87:0,6,57	1/1:14,0:13:15.75:87,16,0	1/1:41,1:41:75.76:378,76,0	0/1:24,0:24:2.34:113,0,2	0/0:13,0:12:19.89:0,20,94	0/0:14,0:14:11.65:0,12,51	0/0:7,0:7:8.96:0,9,24
chr10	41383363	.	ATG	A	80.40	PASS	AB=0.955;AC=7;AF=0.130;AN=54;BaseQRankSum=1.492;DP=588;FS=50.410;HRun=0;HaplotypeScore=146.6505;InbreedingCoeff=0.1195;MQ=41.54;MQ0=36;MQRankSum=-0.527;QD=0.77;ReadPosRankSum=-2.028;VQSLOD=0.7727;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:16,5:18:2.53:44,3,0	0/0:5,0:4:9.02:0,9,134	./.	0/0:46,0:5:11.79:0,12,129	0/1:16,1:14:47.71:48,0,311	0/0:23,0:22:5.80:0,6,83	0/0:23,0:21:45.01:0,45,671	0/0:17,0:16:39.33:0,39,248	0/0:14,0:13:7.88:0,8,64	0/0:28,0:24:46.07:0,46,838	0/0:16,1:17:23.91:0,24,393	0/0:25,3:28:22.79:0,23,421	0/0:17,1:16:2.73:0,3,92	0/1:25,1:26:26.57:27,0,507	0/0:25,2:27:19.47:0,19,882	1/1:8,10:18:1.59:65,2,0	0/0:24,1:25:51.24:0,51,803	0/0:19,0:19:35.78:0,36,614	0/0:22,0:17:30.47:0,30,286	0/0:15,1:15:2.81:0,3,52	0/0:13,0:6:2.98:0,3,22	0/0:17,0:17:5.86:0,6,68	0/0:14,1:14:0.49:0,0,286	0/0:40,1:40:35.76:0,36,1048	0/1:21,1:22:12.51:13,0,437	0/0:12,1:12:2.04:0,2,119	0/0:13,0:13:7.74:0,8,62	0/0:7,1:7:5.40:0,5,38
chr10	41383365	.	GCACACACACACACACACACACA	G	173.73	PASS	AB=0.955;AC=3;AF=0.060;AN=50;BaseQRankSum=-2.525;DP=589;FS=6.725;HRun=0;HaplotypeScore=271.9067;InbreedingCoeff=0.3221;MQ=41.37;MQ0=36;MQRankSum=0.886;QD=4.14;ReadPosRankSum=0.198;VQSLOD=1.7301;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:18:2.95:0,3,73	0/0:5,0:4:6.02:0,6,368	./.	0/0:46,0:5:0:0,0,0	0/0:18,0:15:15.05:0,15,540	0/0:8,13:22:3.48:0,3,48	1/1:21,0:19:14.47:254,14,0	0/0:17,0:16:16.46:0,16,296	./.	0/0:29,0:25:57.20:0,57,2346	0/0:15,0:15:6.96:0,7,329	0/0:29,0:29:39.58:0,40,1257	0/0:19,0:17:6.02:0,6,103	0/0:26,0:26:27.56:0,28,1283	0/0:29,0:29:51.17:0,51,2657	0/0:19,0:19:4.32:0,4,25	0/0:25,0:25:48.16:0,48,2445	0/0:19,0:19:30.10:0,30,1623	0/1:20,0:16:17.01:17,0,128	0/0:16,0:15:3.01:0,3,43	0/0:12,0:5:3.90:0,4,61	./.	0/0:16,0:15:9:0,9,146	0/0:41,0:40:51.15:0,51,2609	0/0:22,0:22:28.85:0,29,1369	0/0:14,0:13:17.99:0,18,295	0/0:10,0:13:12.03:0,12,179	0/0:7,0:7:11.40:0,11,162
chr10	41383404	.	CACACAG	C	2020.57	PASS	AB=1.000;AC=22;AF=0.407;AN=54;BaseQRankSum=-4.871;DP=511;FS=25.559;HRun=0;HaplotypeScore=116.7960;InbreedingCoeff=0.1052;MQ=42.36;MQ0=33;MQRankSum=5.677;QD=5.39;ReadPosRankSum=-0.292;VQSLOD=0.4813;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:23:14.93:116,15,0	0/0:7,0:5:9.02:0,9,120	0/0:11,0:3:3.43:0,3,20	0/0:18,0:4:6.95:0,7,57	0/1:25,0:21:17.37:151,0,17	0/0:20,0:19:5.90:0,6,37	0/1:18,0:15:3.71:4,0,35	0/0:12,0:10:7.98:0,8,47	./.	0/1:36,0:32:99:148,0,563	1/1:14,0:13:11.50:78,12,0	1/1:30,0:29:22.61:334,23,0	0/1:11,0:9:20.44:20,0,73	0/1:25,0:25:99:137,0,105	0/1:39,0:37:99:310,0,401	1/1:5,14:18:2.25:71,2,0	0/1:26,0:26:99:167,0,289	0/0:21,0:21:19.41:0,19,221	0/1:13,0:9:18.68:19,0,51	0/0:10,0:9:12.46:0,12,103	0/0:9,0:3:0:0,0,0	0/0:11,0:11:3:0,3,25	1/1:17,0:17:12.78:123,13,0	1/1:38,0:37:32.95:435,33,0	0/1:26,0:24:70.71:71,0,206	0/1:11,0:10:2.89:3,0,198	0/0:7,0:6:6.02:0,6,124	0/0:7,0:6:7.24:0,7,58
chr10	41383406	.	CACAGAG	C	3455.14	PASS	AB=0.998;AC=21;AF=0.389;AN=54;BaseQRankSum=-4.946;DP=519;FS=31.913;HRun=0;HaplotypeScore=114.6339;InbreedingCoeff=0.0854;MQ=42.42;MQ0=31;MQRankSum=4.818;QD=9.68;ReadPosRankSum=1.515;VQSLOD=0.7172;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:27:0.88:0,1,4	0/0:7,0:5:9.01:0,9,143	0/0:13,0:3:6.44:0,6,60	0/0:21,0:4:6.96:0,7,115	0/1:25,0:22:44.66:45,0,74	0/0:21,0:20:9.03:0,9,124	0/0:17,0:15:8.76:0,9,98	0/0:12,0:10:17.81:0,18,161	./.	0/1:36,0:32:99:499,0,228	1/1:13,0:12:11.77:174,12,0	1/1:12,18:29:23.37:386,23,0	0/1:11,0:9:1.22:1,0,139	0/1:25,0:25:84.80:85,0,199	0/1:39,1:38:99:803,0,137	1/1:19,0:18:2.41:54,2,0	0/1:26,0:26:59.53:60,0,174	0/1:21,0:21:19.69:20,0,58	0/1:13,0:9:3.86:4,0,73	0/0:11,0:10:11.87:0,12,158	0/1:7,0:2:0:0,0,0	0/0:11,0:11:3.01:0,3,49	1/1:16,1:17:20.66:242,21,0	1/1:37,0:36:60.50:827,60,0	0/1:25,0:23:46.98:231,0,47	0/1:12,0:11:27.23:27,0,223	0/0:7,0:6:6.02:0,6,135	0/0:8,0:7:5.20:0,5,65
chr10	41383408	.	CAGAG	C	3568.10	PASS	AB=0.965;AC=25;AF=0.446;AN=56;BaseQRankSum=-2.191;DP=559;FS=40.116;HRun=0;HaplotypeScore=113.4443;InbreedingCoeff=0.4796;MQ=43.65;MQ0=30;MQRankSum=5.844;QD=10.17;ReadPosRankSum=3.923;VQSLOD=1.0723;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:27:2.34:0,2,7	0/0:7,0:5:6.02:0,6,99	0/1:16,0:4:3.03:3,0,50	0/0:25,0:7:12.50:0,13,245	0/1:23,0:21:53.92:68,0,54	0/0:22,0:21:9.03:0,9,124	0/0:20,0:18:5.21:0,5,84	0/0:15,0:13:26.82:0,27,264	0/0:4,0:3:3:0,3,25	1/1:37,0:33:41.74:651,42,0	1/1:10,1:11:11.89:174,12,0	1/1:27,1:27:15.04:195,15,0	0/0:14,0:11:12.93:0,13,147	0/1:22,0:25:41.05:71,0,41	1/1:39,0:39:67.20:931,67,0	1/1:19,0:18:2.71:21,3,0	0/1:25,1:27:9.34:106,0,9	1/1:7,13:21:8.92:115,9,0	0/0:17,0:13:19.30:0,19,263	0/0:16,0:15:12.98:0,13,200	1/1:8,0:3:2.22:7,2,0	0/0:15,0:14:6.02:0,6,98	1/1:16,1:17:19.62:265,20,0	1/1:37,0:36:42.13:623,42,0	1/1:22,1:23:26.80:314,27,0	0/1:15,0:14:24.11:24,0,265	0/0:12,0:10:15.05:0,15,228	0/0:10,0:9:6.56:0,7,60
chr10	41383710	.	C	CTGTGTGTGTG	208.98	PASS	AB=1.000;AC=7;AF=0.135;AN=52;BaseQRankSum=3.318;DP=397;FS=8.125;HRun=0;HaplotypeScore=133.9273;InbreedingCoeff=0.2739;MQ=51.57;MQ0=35;MQRankSum=-4.383;QD=2.82;ReadPosRankSum=-2.391;VQSLOD=1.2651;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:23:50.19:0,50,1422	0/0:9,0:8:16.27:0,16,436	0/0:17,0:12:26.62:0,27,635	0/0:19,0:12:27.61:0,28,824	0/0:20,0:14:21.07:0,21,704	1/1:8,9:16:1.67:38,2,0	0/1:13,0:11:11.64:249,0,12	0/0:27,0:27:34.71:0,35,1143	./.	0/0:19,0:14:39.13:0,39,1130	0/0:7,0:6:6.02:0,6,202	0/0:15,0:15:33.05:0,33,916	./.	0/0:9,0:9:24.06:0,24,673	0/0:11,0:10:24.55:0,25,781	0/1:18,0:19:18.18:18,0,909	0/0:15,0:14:32.85:0,33,659	0/0:14,0:13:36.54:0,37,923	0/1:22,0:15:8.27:8,0,596	0/0:10,0:9:15.05:0,15,342	0/0:11,0:11:9.58:0,10,226	1/1:3,0:3:1.77:4,2,0	0/0:11,0:10:9.92:0,10,290	0/0:16,0:16:27.09:0,27,814	0/0:14,0:12:24.08:0,24,744	0/0:21,0:20:54.19:0,54,1640	0/0:12,0:8:15.05:0,15,376	0/0:18,0:15:39.13:0,39,1178
chr10	41383901	.	C	CTTTT	7067.96	PASS	AC=28;AF=0.560;AN=50;BaseQRankSum=5.444;DP=477;FS=1.715;HRun=9;HaplotypeScore=98.0365;InbreedingCoeff=0.9951;MQ=74.63;MQ0=0;MQRankSum=-3.762;QD=27.50;ReadPosRankSum=-2.343;VQSLOD=2.6683;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,0:38:90.75:540,91,0	0/0:12,0:12:30.03:0,30,417	0/0:27,0:21:36:0,36,495	0/0:25,0:22:27.43:0,27,332	0/0:25,0:25:72.21:0,72,1029	1/1:2,0:17:33.97:425,34,0	1/1:4,0:18:33.10:410,33,0	1/1:15,15:31:51.07:988,51,0	./.	0/0:17,0:17:48.15:0,48,702	0/0:13,0:13:33.05:0,33,456	1/1:2,0:25:49.77:299,50,0	./.	0/0:10,0:10:27.08:0,27,394	0/0:22,0:22:63.18:0,63,921	1/1:1,0:12:26.41:175,26,0	0/0:32,0:32:87.26:0,87,1271	0/0:19,0:19:51.11:0,51,722	1/1:4,3:10:18.06:364,18,0	1/1:5,15:22:60.13:1252,60,0	1/1:4,4:9:15.05:296,15,0	./.	1/1:4,0:13:28.14:158,28,0	1/1:2,0:18:46.88:294,47,0	0/0:18,0:18:48.15:0,48,702	1/1:5,11:18:36.12:837,36,0	1/1:1,11:14:33.11:733,33,0	1/1:0,0:11:24.08:298,24,0
chr10	41384190	.	ATCTC	A	644.56	PASS	AB=0.873;AC=11;AF=0.239;AN=46;BaseQRankSum=1.210;DP=487;FS=3.562;HRun=0;HaplotypeScore=85.4027;InbreedingCoeff=0.4060;MQ=74.16;MQ0=16;MQRankSum=-0.682;QD=5.37;ReadPosRankSum=3.201;VQSLOD=1.5808;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:6,0:6:9.03:0,9,191	./.	0/0:55,0:27:0:0,0,1	0/0:14,0:14:9.03:0,9,201	0/0:19,0:18:12.93:0,13,218	0/0:12,0:12:7.74:0,8,129	./.	0/0:3,0:3:0:0,0,0	0/0:21,0:21:22.89:0,23,369	0/0:19,0:19:2.99:0,3,24	1/1:14,2:16:6.02:92,6,0	0/0:3,0:2:0.47:0,0,1	0/0:15,0:15:11.11:0,11,276	0/0:13,0:12:6.02:0,6,100	1/1:10,0:18:15.02:140,15,0	0/0:17,0:22:20.80:0,21,322	0/0:7,0:10:3.01:0,3,52	0/1:18,3:22:15.01:101,0,15	1/1:15,0:15:3.01:46,3,0	0/0:12,0:12:2.56:0,3,14	./.	0/1:9,0:9:0:0,0,0	1/1:16,7:22:18.06:276,18,0	0/0:10,0:13:2.74:0,3,12	0/0:16,0:16:6.02:0,6,104	0/1:12,2:16:48.82:120,0,49	./.
chr10	41384605	.	A	AG	9666.30	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-4.426;DP=432;FS=6.776;HRun=6;HaplotypeScore=53.6036;InbreedingCoeff=0.8599;MQ=66.98;MQ0=4;MQRankSum=0.209;QD=24.41;ReadPosRankSum=1.420;VQSLOD=4.5672;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,23:24:63.20:790,63,0	0/0:6,0:6:15.03:0,15,153	0/0:13,0:6:6.01:0,6,61	0/0:17,0:11:8.78:0,9,149	1/1:1,10:11:27.09:339,27,0	1/1:3,13:16:30.10:377,30,0	1/1:1,18:19:39.12:491,39,0	1/1:31,0:31:72.24:424,72,0	1/1:0,14:13:36.12:453,36,0	1/1:2,16:18:51.14:620,51,0	1/1:4,17:21:38.94:488,39,0	1/1:2,14:15:7.48:386,7,0	1/1:3,15:17:39.12:491,39,0	1/1:0,14:14:39.12:488,39,0	1/1:1,17:18:39.12:491,39,0	1/1:0,9:9:21.07:264,21,0	1/1:0,17:17:45.14:566,45,0	1/1:2,2:4:6.02:75,6,0	1/1:12,0:12:26.35:157,26,0	1/1:13,0:14:17.08:145,17,0	1/1:19,0:20:40.70:303,41,0	1/1:1,11:12:33.11:415,33,0	1/1:0,9:9:17.88:226,18,0	1/1:0,9:9:21.07:264,21,0	1/1:1,16:17:39.12:487,39,0	1/1:21,0:21:54.34:327,54,0	1/1:14,0:15:38.70:276,39,0	1/1:17,0:17:44.68:321,45,0
chr10	41384606	.	G	GA	7118.13	PASS	AB=1.000;AC=45;AF=0.804;AN=56;BaseQRankSum=-0.790;DP=442;FS=0.677;HRun=1;HaplotypeScore=62.2267;InbreedingCoeff=0.3560;MQ=68.00;MQ0=4;MQRankSum=-1.449;QD=17.58;ReadPosRankSum=5.830;VQSLOD=5.1303;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:23:58.04:266,58,0	0/0:6,0:6:18.03:0,18,222	0/0:13,0:6:8.48:0,8,76	0/0:18,0:12:5.03:0,5,225	0/1:11,0:11:13.46:89,0,13	1/1:15,0:15:4.37:85,4,0	1/1:19,0:19:13.13:115,13,0	1/1:0,32:32:96.19:1265,96,0	1/1:14,0:13:33.45:154,33,0	1/1:18,0:18:14.36:137,14,0	0/1:21,0:21:8.62:152,0,9	1/1:18,0:17:11.75:113,12,0	0/1:18,0:17:9.53:118,0,10	1/1:15,0:15:36:175,36,0	0/1:19,0:19:7.12:108,0,7	1/1:9,0:9:19.01:80,19,0	1/1:18,0:18:40.85:175,41,0	0/1:3,0:3:14.09:14,0,15	1/1:1,13:14:37.76:469,38,0	1/1:2,12:14:10.23:305,10,0	1/1:1,20:21:41.24:682,41,0	1/1:12,0:12:6.27:100,6,0	1/1:9,0:9:16.09:67,16,0	1/1:9,0:9:18.98:81,19,0	1/1:17,0:17:11.19:123,11,0	1/1:0,23:23:69.14:938,69,0	1/1:1,14:15:42.10:615,42,0	1/1:0,18:18:45.15:689,45,0
chr10	41384909	.	CCA	C	7185.54	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=0.454;DP=659;FS=9.073;HRun=0;HaplotypeScore=93.6134;InbreedingCoeff=0.9999;MQ=86.13;MQ0=0;MQRankSum=-0.916;QD=39.48;ReadPosRankSum=-1.003;VQSLOD=6.1967;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:66.23:0,66,1236	0/0:10,0:10:30.10:0,30,551	0/0:33,0:33:96.28:0,96,1713	0/0:18,0:18:41.65:0,42,785	0/0:15,0:14:45.09:0,45,512	0/0:25,0:25:69.24:0,69,1293	0/0:24,0:24:72.25:0,72,1348	1/1:6,29:35:87.29:1275,87,0	0/0:29,0:29:87.30:0,87,1629	0/0:31,0:31:90.13:0,90,1016	0/0:23,0:23:69.20:0,69,807	0/0:20,0:20:60.21:0,60,1122	0/0:32,0:32:90.31:0,90,1685	0/0:19,0:19:54.16:0,54,649	0/0:43,0:43:99:0,129,1478	0/0:28,0:28:84.29:0,84,1541	0/0:21,0:21:60.63:0,61,705	0/0:17,0:17:51.15:0,51,608	1/1:2,18:20:54.17:778,54,0	1/1:0,18:18:54.14:771,54,0	1/1:2,30:32:87.28:1263,87,0	0/0:16,0:16:48.16:0,48,890	0/0:16,0:16:48.16:0,48,892	0/0:19,0:19:54.19:0,54,1012	0/0:14,0:14:42.12:0,42,500	1/1:1,29:30:52.37:1244,52,0	1/1:0,32:32:90.30:1325,90,0	1/1:0,15:15:36.12:530,36,0
chr10	41388968	.	GTGTGTA	G	1031.84	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=10.059;DP=566;FS=20.322;HRun=0;HaplotypeScore=164.1285;InbreedingCoeff=-0.2925;MQ=48.92;MQ0=23;MQRankSum=-8.969;QD=2.80;ReadPosRankSum=3.333;VQSLOD=1.5877;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:27:0.04:0,0,139	0/0:14,0:14:38.79:0,39,666	0/0:46,0:5:8.47:0,8,56	0/1:40,0:7:26.98:37,0,27	1/1:13,6:18:15.56:212,16,0	0/0:18,0:18:33.03:0,33,240	0/0:15,0:15:29.56:0,30,253	0/0:41,0:39:95.31:0,95,810	0/1:20,0:19:99:114,0,111	0/1:15,0:15:0.88:1,0,242	0/1:18,0:18:18.09:18,0,161	0/1:15,0:15:19.96:20,0,161	0/1:19,0:19:68.85:69,0,139	1/1:8,2:9:4.11:110,4,0	0/0:16,0:16:11.91:0,12,92	0/1:14,0:14:24.10:24,0,149	0/1:21,0:21:71.18:71,0,156	0/1:20,0:20:59.14:59,0,282	0/0:13,0:12:16.93:0,17,181	0/1:16,0:16:67.89:68,0,111	0/1:15,0:15:10.68:11,0,57	0/0:12,0:12:8.99:0,9,74	0/1:14,0:14:24.01:24,0,133	0/0:23,0:23:11.78:0,12,76	0/1:21,0:21:45.03:45,0,167	0/1:24,0:22:99:135,0,136	0/1:27,0:26:99:149,0,141	0/1:13,0:13:26.55:27,0,97
chr10	41388974	.	ATGTGTGTG	A	3880.52	PASS	AB=0.809;AC=39;AF=0.722;AN=54;BaseQRankSum=2.697;DP=552;FS=3.058;HRun=0;HaplotypeScore=162.9300;InbreedingCoeff=0.3959;MQ=47.78;MQ0=24;MQRankSum=-5.022;QD=9.68;ReadPosRankSum=-0.602;VQSLOD=2.6060;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:12,0:25:0:0,0,0	0/0:13,0:13:21.07:0,21,689	0/0:44,0:4:1.82:0,2,5	./.	0/1:18,0:17:9.34:9,0,34	0/0:8,0:20:23.99:0,24,241	0/0:10,0:15:12.01:0,12,143	1/1:37,0:35:3.71:11,4,0	1/1:8,11:18:18.06:454,18,0	1/1:12,4:16:11.75:187,12,0	1/1:9,8:18:9.50:186,10,0	1/1:8,8:17:6.49:152,6,0	1/1:9,13:22:12.04:303,12,0	1/1:11,0:10:1.79:6,2,0	1/1:5,11:16:2.92:17,3,0	1/1:7,0:14:5.78:112,6,0	1/1:14,9:22:12.04:292,12,0	0/1:17,2:19:57.09:464,0,57	1/1:9,0:10:2.91:24,3,0	1/1:9,0:15:18.01:279,18,0	1/1:11,0:15:3.01:53,3,0	0/1:8,4:12:0:0,0,0	1/1:8,7:15:9.03:182,9,0	0/0:10,11:21:2.92:0,3,17	0/1:12,5:19:13.24:210,0,13	1/1:12,0:21:8.32:383,8,0	1/1:11,0:24:23.96:446,24,0	1/1:8,0:12:5.05:110,5,0
chr10	41389007	.	TGTGTGTGA	T	2179.81	PASS	AB=0.983;AC=15;AF=0.268;AN=56;BaseQRankSum=9.400;DP=441;FS=15.734;HRun=0;HaplotypeScore=135.5410;InbreedingCoeff=-0.2178;MQ=60.05;MQ0=13;MQRankSum=-9.049;QD=11.07;ReadPosRankSum=8.266;VQSLOD=0.2502;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:22:23.95:0,24,201	0/0:9,0:9:27.05:0,27,758	0/0:28,0:19:57.05:0,57,615	0/0:14,0:6:18.02:0,18,190	0/0:19,0:18:29.86:0,30,226	0/0:24,0:24:56.92:0,57,605	0/0:14,0:14:30.01:0,30,284	0/0:19,0:17:50.89:0,51,562	0/1:15,0:14:50.90:328,0,51	0/1:7,0:7:57.39:124,0,57	0/1:13,1:14:99:138,0,120	0/1:11,0:11:43.48:117,0,43	0/1:17,1:18:81.91:200,0,82	0/0:9,0:8:14.65:0,15,128	0/0:20,0:20:26.38:0,26,222	0/1:9,0:9:58.12:58,0,74	0/1:17,0:16:99:182,0,107	0/1:16,0:16:99:322,0,185	0/0:10,0:10:12.13:0,12,158	0/1:19,0:19:92.52:93,0,279	0/0:23,0:23:20.14:0,20,369	0/0:10,2:12:20.89:0,21,168	0/1:13,0:13:99:111,0,148	0/0:20,0:20:22.65:0,23,174	0/1:15,2:16:99:169,0,147	0/1:18,0:17:99:173,0,197	0/1:19,0:18:78.95:243,0,79	1/1:4,0:4:6.02:83,6,0
chr10	41390498	.	TA	T	8339.66	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=1.663;DP=558;FS=2.394;HRun=11;HaplotypeScore=93.2174;InbreedingCoeff=0.9544;MQ=67.07;MQ0=0;MQRankSum=-1.439;QD=17.74;ReadPosRankSum=1.599;VQSLOD=5.6096;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,34:43:73.95:597,74,0	0/0:6,0:7:17.88:0,18,174	0/0:21,0:19:13.96:0,14,185	0/0:8,0:6:12.01:0,12,111	0/0:15,0:15:36.09:0,36,383	1/1:2,17:20:43.99:351,44,0	1/1:7,13:20:3.95:239,4,0	1/1:4,20:24:56.91:468,57,0	1/1:4,18:22:44.94:369,45,0	1/1:3,20:23:56.88:460,57,0	1/1:3,17:20:47.94:394,48,0	1/1:1,18:19:41.95:345,42,0	1/1:1,14:15:32.96:271,33,0	0/0:18,0:18:40.89:0,41,410	1/1:7,13:21:25.99:203,26,0	1/1:3,24:27:56.93:468,57,0	0/0:18,1:19:15.64:0,16,389	1/1:6,12:16:32.79:270,33,0	1/1:4,22:26:44.68:507,45,0	1/1:5,20:25:59.91:492,60,0	1/1:1,14:15:32.96:271,33,0	1/1:1,16:17:38.95:320,39,0	1/1:4,19:23:47.77:393,48,0	1/1:2,16:19:46.98:375,47,0	1/1:1,17:18:41.95:345,42,0	1/1:0,18:18:53.91:438,54,0	1/1:2,24:26:62.92:517,63,0	1/1:1,10:11:29.96:246,30,0
chr10	41390783	.	GT	G	7916.06	PASS	AB=0.926;AC=29;AF=0.518;AN=56;BaseQRankSum=9.069;DP=691;FS=5.541;HRun=9;HaplotypeScore=80.7993;InbreedingCoeff=0.9476;MQ=78.22;MQ0=0;MQRankSum=-1.627;QD=21.39;ReadPosRankSum=2.761;VQSLOD=5.6761;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,41:43:99:1043,114,0	0/0:7,0:7:21.06:0,21,242	0/1:22,2:24:3.86:4,0,384	0/0:18,0:18:31.57:0,32,290	0/0:1,0:19:51.48:0,51,281	0/0:35,0:34:84.19:0,84,936	0/0:42,0:42:99:0,117,1303	1/1:3,17:20:51:458,51,0	0/0:23,0:23:57.12:0,57,633	1/1:4,17:21:51.02:467,51,0	1/1:1,16:17:48.03:438,48,0	0/0:16,0:16:33.08:0,33,362	0/0:31,0:31:75.04:0,75,777	0/0:1,0:23:51.27:0,51,266	1/1:5,25:30:63.02:576,63,0	1/1:2,26:28:75.04:686,75,0	0/0:34,2:36:68.80:0,69,1027	1/1:5,22:27:36.20:498,36,0	1/1:2,19:21:57:515,57,0	1/1:0,26:26:78.04:713,78,0	1/1:4,30:34:72.03:659,72,0	0/0:24,0:24:72.10:0,72,786	0/0:15,0:15:42.12:0,42,485	0/0:32,0:32:78.18:0,78,860	1/1:2,19:21:45.01:411,45,0	1/1:1,25:26:75.01:680,75,0	1/1:1,23:24:66.03:604,66,0	1/1:1,6:7:18.01:165,18,0
chr10	41390963	.	CGTGT	C	510.61	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=2.467;DP=639;FS=2.245;HRun=0;HaplotypeScore=125.9946;InbreedingCoeff=0.6596;MQ=61.16;MQ0=9;MQRankSum=-1.650;QD=5.32;ReadPosRankSum=2.620;VQSLOD=2.6660;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:9:0,9,100	0/0:10,0:10:9.02:0,9,164	0/0:29,0:22:1.25:0,1,3	0/0:19,0:13:2.29:0,2,5	0/0:23,0:23:14.99:0,15,248	0/0:21,0:19:2.67:0,3,49	0/0:27,0:26:11.97:0,12,111	0/0:24,0:24:11.31:0,11,133	1/1:10,12:21:12.04:189,12,0	0/0:20,0:20:28.33:0,28,477	0/0:15,0:14:6.01:0,6,92	0/0:15,0:15:12.02:0,12,211	1/1:20,10:30:11.41:255,11,0	0/0:15,0:23:5.98:0,6,123	0/0:24,0:22:15.05:0,15,257	0/0:24,0:24:2.99:0,3,25	1/1:16,0:21:9.01:84,9,0	0/0:28,0:26:41.87:0,42,589	0/0:16,0:17:16.03:0,16,286	0/0:22,0:22:33.08:0,33,658	0/0:43,0:46:56.32:0,56,874	1/1:6,13:20:9.02:123,9,0	0/0:20,0:20:17.55:0,18,314	0/0:16,0:36:2.37:0,2,23	0/0:27,0:27:14.89:0,15,245	0/0:24,0:25:49.68:0,50,824	0/0:13,0:15:20.70:0,21,324	0/0:7,0:7:15.01:0,15,267
chr10	41391176	.	G	GA	5760.31	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-11.263;DP=532;FS=0.350;HRun=7;HaplotypeScore=48.8046;InbreedingCoeff=0.9496;MQ=73.40;MQ0=0;MQRankSum=-0.993;QD=29.85;ReadPosRankSum=1.810;VQSLOD=5.2211;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,9:9:27.08:326,27,0	0/0:12,0:12:30.05:0,30,290	0/0:7,0:7:2.14:0,2,77	0/0:12,0:10:13.42:0,13,143	1/1:2,29:31:84.05:945,84,0	0/0:20,0:20:54.07:0,54,515	0/0:17,0:17:51.08:0,51,492	0/0:31,0:31:72.09:0,72,691	0/0:17,0:17:51.05:0,51,480	1/1:1,22:23:69.19:818,69,0	1/1:2,19:21:57.17:677,57,0	0/0:10,0:10:30.05:0,30,290	0/0:20,0:20:54.08:0,54,521	1/1:2,22:24:35.01:697,35,0	1/1:2,16:18:42.13:507,42,0	1/1:2,17:19:42.13:507,42,0	0/0:19,0:19:51.08:0,51,492	1/1:4,24:28:11.06:703,11,0	0/0:23,0:23:60.07:0,60,569	0/0:33,0:33:96.15:0,96,923	0/0:13,0:13:36.05:0,36,348	0/0:18,0:18:42.06:0,42,402	0/0:20,0:20:54.08:0,54,521	0/0:16,0:16:42.05:0,42,401	1/1:2,18:20:48.15:580,48,0	0/0:27,2:29:11.65:0,12,677	0/0:18,0:18:45.07:0,45,434	0/0:4,0:4:12:0,12,109
chr10	41391797	.	C	CG	6553.38	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=9.280;DP=455;FS=19.987;HRun=1;HaplotypeScore=88.6149;InbreedingCoeff=0.9587;MQ=50.33;MQ0=6;MQRankSum=-10.874;QD=29.92;ReadPosRankSum=-2.945;VQSLOD=2.8296;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,12:24:56.73:669,57,0	0/0:11,0:11:30.01:0,30,350	0/0:10,0:7:8.70:0,9,87	0/0:7,0:3:5.75:0,6,71	0/0:12,0:12:30.05:0,30,365	0/0:15,0:15:45.15:0,45,581	0/0:23,0:23:66.06:0,66,793	1/1:10,15:23:59.90:717,60,0	0/0:21,0:21:57.17:0,57,722	1/1:4,15:18:50.81:654,51,0	1/1:4,8:13:26.95:317,27,0	0/0:13,0:13:36.06:0,36,443	0/0:15,0:15:45.10:0,45,537	0/0:15,0:15:33.05:0,33,402	1/1:4,8:12:27.06:344,27,0	1/1:7,7:14:30.06:386,30,0	0/0:24,0:24:66.21:0,66,850	1/1:6,15:21:57.13:770,57,0	1/1:10,11:20:42.10:560,42,0	1/1:6,12:18:44.98:562,45,0	1/1:4,4:7:9:94,9,0	0/0:17,0:17:48.14:0,48,596	0/0:22,0:22:66.14:0,66,784	0/0:31,0:31:92.49:0,92,1155	1/1:5,10:15:33.09:440,33,0	1/1:3,14:17:12.41:632,12,0	1/1:3,5:8:18.04:232,18,0	1/1:0,4:4:12.04:177,12,0
chr10	41391811	.	C	CAA	7343.95	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=11.574;DP=503;FS=5.484;HRun=9;HaplotypeScore=107.8294;InbreedingCoeff=0.9881;MQ=58.09;MQ0=4;MQRankSum=-11.138;QD=23.09;ReadPosRankSum=-6.436;VQSLOD=2.5645;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:7,0:29:64.87:620,65,0	0/0:12,0:12:33.08:0,33,351	0/0:13,0:9:27.01:0,27,263	0/0:12,0:8:13.66:0,14,144	1/1:10,0:22:32.76:312,33,0	0/0:14,0:14:39.09:0,39,415	0/0:23,0:23:57.12:0,57,607	1/1:13,2:29:52.32:526,52,0	0/0:22,0:22:50.85:0,51,542	1/1:2,13:17:45.14:639,45,0	1/1:3,8:13:30.05:408,30,0	0/0:14,0:14:42.11:0,42,447	0/0:10,0:10:27.04:0,27,279	1/1:12,0:23:27:252,27,0	1/1:2,9:11:21.07:323,21,0	1/1:7,0:19:33.03:308,33,0	1/1:2,23:26:62.70:919,63,0	1/1:4,17:23:53.15:756,53,0	1/1:10,4:23:44.80:513,45,0	1/1:6,2:21:45.06:476,45,0	1/1:3,1:8:15.51:168,16,0	0/0:16,0:16:27.02:0,27,287	0/0:20,0:20:48.10:0,48,511	0/0:29,0:29:81.18:0,81,862	1/1:4,9:14:26.53:351,27,0	1/1:6,2:22:25.61:438,26,0	1/1:2,0:10:21.04:219,21,0	1/1:1,0:5:12.02:115,12,0
chr10	41393151	.	GA	G	12002.23	PASS	AB=1.000;AC=44;AF=0.786;AN=56;BaseQRankSum=6.377;DP=567;FS=1.890;HRun=1;HaplotypeScore=93.4518;InbreedingCoeff=0.3539;MQ=78.78;MQ0=0;MQRankSum=-5.406;QD=22.77;ReadPosRankSum=7.771;VQSLOD=4.6900;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,38:38:84.19:1128,84,0	0/0:3,0:3:9.02:0,9,100	0/0:15,0:15:42.10:0,42,522	0/0:21,0:20:30.21:0,30,450	1/1:0,10:10:14.50:160,14,0	1/1:20,0:20:21.02:64,21,0	0/1:18,0:18:10.34:10,0,36	1/1:1,26:27:71.97:847,72,0	0/1:17,0:17:4.10:31,0,4	1/1:0,17:17:51.11:632,51,0	1/1:0,12:12:30.10:417,30,0	0/1:22,0:22:15.46:15,0,89	0/1:27,0:27:32.90:33,0,38	1/1:1,14:15:36.09:479,36,0	1/1:1,33:34:87.29:1206,87,0	1/1:0,25:25:63.20:861,63,0	0/1:35,0:35:37.84:38,0,57	1/1:0,24:24:63.15:834,63,0	1/1:0,20:20:59.99:715,60,0	1/1:0,19:19:54.14:723,54,0	1/1:0,40:40:96.32:1331,96,0	1/1:7,0:7:4.85:13,5,0	1/1:7,0:7:6.04:17,6,0	0/1:29,0:29:23.48:23,0,85	1/1:0,11:11:27.09:370,27,0	1/1:0,19:19:57.17:769,57,0	1/1:0,28:28:75.25:1036,75,0	1/1:0,6:6:18.06:247,18,0
chr10	41393152	.	AG	A	8010.23	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=1.415;DP=570;FS=2.377;HRun=9;HaplotypeScore=109.5560;InbreedingCoeff=0.9291;MQ=79.91;MQ0=0;MQRankSum=-6.149;QD=15.11;ReadPosRankSum=6.475;VQSLOD=4.6515;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:39,0:39:69.73:432,70,0	0/0:2,0:2:6.02:0,6,67	0/0:15,0:15:32.29:0,32,341	0/0:23,0:21:40.77:0,41,431	1/1:11,0:11:8.52:49,9,0	1/1:0,20:20:57.03:521,57,0	1/1:2,16:18:42.02:384,42,0	1/1:27,0:27:45.10:234,45,0	1/1:1,16:17:45.02:412,45,0	1/1:17,0:17:36.96:184,37,0	1/1:12,0:12:28.77:149,29,0	1/1:6,16:22:42.01:384,42,0	1/1:5,22:27:63.03:576,63,0	1/1:16,0:16:33.32:174,33,0	1/1:34,0:34:71.62:430,72,0	1/1:25,0:25:58:296,58,0	1/1:5,30:35:81.04:741,81,0	1/1:24,0:24:53.02:279,53,0	1/1:21,0:21:30.06:200,30,0	1/1:19,0:19:49.51:282,50,0	1/1:40,0:40:92.55:497,93,0	1/1:1,6:7:17.96:156,18,0	1/1:0,6:6:18.01:165,18,0	1/1:6,23:29:60.02:549,60,0	1/1:11,0:11:25.71:130,26,0	1/1:19,0:18:51.54:267,52,0	1/1:28,0:28:72.84:412,73,0	1/1:6,0:6:17.60:108,18,0
chr10	41394760	.	C	CA	6297.61	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-2.768;DP=713;FS=1.315;HRun=9;HaplotypeScore=78.5323;InbreedingCoeff=0.9909;MQ=85.29;MQ0=0;MQRankSum=-0.934;QD=20.31;ReadPosRankSum=-0.663;VQSLOD=5.1265;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,2:47:86.79:0,87,982	0/0:14,0:14:41.99:0,42,365	0/0:33,0:35:55.61:0,56,438	0/0:14,0:13:11.63:0,12,140	0/0:23,0:23:59.94:0,60,512	0/0:20,0:20:50.95:0,51,439	0/0:18,0:18:44.96:0,45,386	1/1:7,34:42:77.96:1027,78,0	0/0:28,0:28:77.95:0,78,672	1/1:4,0:24:59.85:310,60,0	1/1:4,2:21:42.98:251,43,0	0/0:20,0:20:59.99:0,60,521	0/0:21,1:22:29.80:0,30,488	0/0:23,0:23:65.98:0,66,573	1/1:4,3:28:39.65:306,40,0	0/0:19,0:19:47.98:0,48,417	0/0:28,0:27:71.98:0,72,625	1/1:1,0:28:65.37:327,65,0	1/1:5,25:30:50.10:773,50,0	1/1:3,27:30:81.13:862,81,0	1/1:1,21:22:48.13:530,48,0	0/0:20,0:20:44.98:0,45,391	0/0:32,0:32:83.97:0,84,729	0/0:40,0:40:92.87:0,93,794	1/1:2,1:20:42.81:232,43,0	1/1:5,24:29:72.17:785,72,0	1/1:3,25:28:69.19:763,69,0	1/1:5,3:8:12.03:132,12,0
chr10	41396112	.	G	GA	20790.88	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-8.776;DP=553;FS=11.803;HRun=2;HaplotypeScore=48.4153;InbreedingCoeff=0.9997;MQ=82.43;MQ0=0;MQRankSum=-7.214;QD=40.69;ReadPosRankSum=5.932;VQSLOD=3.5973;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,28:27:75.21:1098,75,0	0/0:11,0:11:33.11:0,33,428	0/0:15,0:15:39.59:0,40,485	0/0:16,0:16:45.02:0,45,507	1/1:0,18:18:54.18:809,54,0	1/1:0,30:30:81.27:1214,81,0	1/1:2,19:21:51.17:765,51,0	1/1:1,19:20:57.18:834,57,0	1/1:0,29:29:81.27:1214,81,0	1/1:1,17:18:54.17:785,54,0	1/1:0,13:13:39.13:584,39,0	1/1:1,17:18:51.17:764,51,0	1/1:0,14:14:39.13:585,39,0	1/1:0,21:21:57.19:854,57,0	1/1:1,16:17:45.15:675,45,0	1/1:0,16:16:39.13:585,39,0	1/1:1,19:20:54.18:809,54,0	1/1:0,20:20:57.19:854,57,0	1/1:3,16:19:48.16:718,48,0	1/1:0,18:18:51.13:739,51,0	1/1:2,24:26:66.22:989,66,0	1/1:1,24:25:69.23:1034,69,0	1/1:1,15:16:39.13:585,39,0	1/1:0,23:23:63.21:944,63,0	1/1:0,14:14:39.13:585,39,0	1/1:0,23:23:69.23:1031,69,0	1/1:3,29:32:81.27:1197,81,0	1/1:0,12:12:36.12:540,36,0
chr10	41396244	.	CCA	C	1422.65	PASS	AB=1.000;AC=22;AF=0.393;AN=56;BaseQRankSum=4.162;DP=517;FS=5.865;HRun=0;HaplotypeScore=75.5065;InbreedingCoeff=0.3244;MQ=91.17;MQ0=1;MQRankSum=-3.434;QD=5.98;ReadPosRankSum=-3.767;VQSLOD=1.3190;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:17,0:17:5.64:80,0,6	0/0:9,0:9:27.09:0,27,475	0/0:23,0:23:53.64:0,54,785	0/0:22,0:22:57.08:0,57,806	1/1:17,2:19:19.23:139,19,0	0/0:23,0:23:69.15:0,69,1058	0/0:20,0:20:60.14:0,60,942	0/1:11,0:11:29.44:56,0,29	0/0:31,0:31:93.22:0,93,1545	0/1:17,0:17:50.18:131,0,50	1/1:16,2:18:28.85:335,29,0	0/0:23,0:23:66.20:0,66,1104	0/0:24,0:24:72.25:0,72,1233	1/1:14,0:14:16.53:56,17,0	1/1:20,1:21:37.49:140,37,0	0/1:14,0:14:7.41:70,0,7	0/0:29,0:29:87.28:0,87,1504	1/1:10,1:11:10.23:138,10,0	0/1:14,0:14:52.78:97,0,53	0/1:14,0:14:24.58:25,0,94	0/1:19,0:18:1.15:131,0,1	0/0:12,0:12:36.09:0,36,591	0/0:21,0:21:60.17:0,60,985	0/0:42,0:42:99:0,126,2212	1/1:15,1:16:25.34:123,25,0	0/1:12,0:12:31.32:42,0,31	0/1:13,0:13:31.98:36,0,32	0/1:8,0:8:6.80:19,0,7
chr10	41396245	.	CA	C	3965.13	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=4.299;DP=513;FS=5.293;HRun=1;HaplotypeScore=59.0026;InbreedingCoeff=0.9568;MQ=90.03;MQ0=1;MQRankSum=-3.222;QD=16.95;ReadPosRankSum=-6.956;VQSLOD=1.3313;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:16:30.63:213,31,0	0/0:9,0:9:27.09:0,27,376	0/0:21,0:21:32.52:0,33,571	0/0:22,0:22:62.09:0,62,694	1/1:3,16:19:41.08:436,41,0	0/0:24,0:24:69.12:0,69,854	0/0:21,0:21:60.13:0,60,766	1/1:12,0:12:18.30:137,18,0	0/0:31,0:31:93.21:0,93,1235	1/1:16,1:17:15.19:212,15,0	1/1:10,8:18:48.78:516,49,0	0/0:23,0:23:66.19:0,66,881	0/0:24,0:24:72.19:0,72,947	1/1:0,14:14:19.67:256,20,0	1/1:1,20:21:48.05:624,48,0	1/1:14,0:14:17.59:130,18,0	0/0:29,0:29:87.27:0,87,1195	1/1:4,7:11:26.84:358,27,0	1/1:13,0:13:20.87:166,21,0	1/1:13,0:13:7.73:56,8,0	1/1:16,0:15:29:239,29,0	0/0:13,0:13:36.08:0,36,468	0/0:20,0:20:60.12:0,60,779	0/0:42,0:42:99:0,126,1751	1/1:1,15:16:30.05:395,30,0	1/1:13,0:13:11.82:92,12,0	1/1:13,0:13:13.52:107,14,0	1/1:8,0:8:4.55:29,5,0
chr10	41396945	.	GC	G	1238.64	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=5.339;DP=563;FS=0.000;HRun=5;HaplotypeScore=58.7616;InbreedingCoeff=0.9957;MQ=80.30;MQ0=0;MQRankSum=-0.160;QD=24.29;ReadPosRankSum=1.169;VQSLOD=2.4333;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,99,1316	0/0:10,0:10:27.08:0,27,355	0/0:15,0:15:36:0,36,420	0/0:16,0:16:34.59:0,35,405	0/0:18,0:18:48.15:0,48,640	0/0:18,0:18:48.15:0,48,640	0/0:25,0:25:69.21:0,69,912	0/0:24,0:24:66.21:0,66,888	1/1:3,21:24:60.17:680,60,0	0/0:18,0:18:48.13:0,48,604	0/0:15,0:15:42.13:0,42,557	0/0:23,0:23:69.23:0,69,943	1/1:1,17:18:45.13:510,45,0	0/0:25,0:25:75.22:0,75,995	0/0:26,0:26:75.25:0,75,1025	0/0:22,1:23:29.17:0,29,786	0/0:32,0:32:96.32:0,96,1312	0/0:19,0:19:57.18:0,57,766	0/0:12,0:12:36.11:0,36,473	0/0:16,0:16:42.13:0,42,559	0/0:29,0:29:81.24:0,81,1069	1/1:3,6:9:18.01:190,18,0	0/0:11,0:11:27.07:0,27,339	0/0:30,0:30:90.29:0,90,1216	0/0:12,0:12:36.11:0,36,478	0/0:19,0:19:51.17:0,51,691	0/0:27,0:27:72.20:0,72,964	0/0:13,0:13:30.10:0,30,410
chr10	41397989	.	A	AT	3164.72	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-5.126;DP=768;FS=0.440;HRun=1;HaplotypeScore=85.6846;InbreedingCoeff=0.9999;MQ=81.83;MQ0=0;MQRankSum=-0.500;QD=39.56;ReadPosRankSum=0.045;VQSLOD=3.9350;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,129,1582	0/0:14,0:14:42.12:0,42,518	0/0:27,0:27:78.15:0,78,946	0/0:17,0:17:41.09:0,41,469	1/1:0,51:51:99:2128,150,0	0/0:26,0:26:78.24:0,78,985	0/0:29,0:29:84.19:0,84,1005	0/0:36,0:36:99:0,105,1236	0/0:15,0:15:45.13:0,45,567	0/0:28,0:28:84.26:0,84,1068	0/0:25,0:25:66.20:0,66,838	0/0:26,0:26:78.25:0,78,1009	0/0:22,0:22:66.21:0,66,855	1/1:0,29:29:78.26:1159,78,0	0/0:25,0:25:75.21:0,75,929	0/0:32,0:32:93.25:0,93,1160	0/0:31,0:31:93.19:0,93,1112	0/0:15,0:15:42.14:0,42,544	0/0:20,0:20:54.14:0,54,650	0/0:33,0:33:99:0,99,1238	0/0:35,0:35:99:0,102,1307	0/0:23,0:23:69.19:0,69,853	0/0:29,0:29:87.23:0,87,1070	0/0:35,0:35:99:0,105,1284	0/0:28,0:28:84.25:0,84,1064	0/0:29,0:28:87.27:0,87,1104	0/0:29,0:29:84.27:0,84,1087	0/0:14,0:14:42.14:0,42,544
chr10	41398893	.	G	GGTGTGTGTGTGTGTGTGTGTGT	27476.70	PASS	AC=48;AF=0.889;AN=54;BaseQRankSum=5.692;DP=649;FS=1.076;HRun=0;HaplotypeScore=428.9356;InbreedingCoeff=0.7646;MQ=62.95;MQ0=2;MQRankSum=-8.803;QD=50.14;ReadPosRankSum=2.462;VQSLOD=2.2931;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:34,0:33:7.88:154,8,0	0/0:18,0:18:51.16:0,51,2718	0/0:34,0:31:80.74:0,81,2155	0/0:35,0:34:66.13:0,66,1912	1/1:7,0:7:5.99:48,6,0	1/1:19,0:19:21.02:542,21,0	1/1:16,0:16:19.98:842,20,0	1/1:33,0:33:69.17:1953,69,0	1/1:26,0:26:27.02:1791,27,0	1/1:25,0:23:33.11:1942,33,0	./.	1/1:23,0:23:20.56:954,21,0	1/1:14,10:30:24.08:1940,24,0	1/1:22,0:22:26.51:1365,27,0	1/1:32,0:32:14.65:534,15,0	1/1:20,0:20:24.20:823,24,0	1/1:16,0:19:33.10:2041,33,0	1/1:19,0:19:30.04:1087,30,0	1/1:24,0:21:42.06:1346,42,0	1/1:17,0:17:14.58:123,15,0	1/1:17,0:17:5.21:43,5,0	1/1:13,12:30:9.03:891,9,0	1/1:19,0:18:2.61:23,3,0	1/1:16,0:15:7.31:66,7,0	1/1:28,0:28:8.94:286,9,0	1/1:44,0:44:99:5492,105,0	1/1:23,0:23:54.15:2593,54,0	1/1:3,0:3:9.03:594,9,0
chr10	41399510	.	C	CA	6939.20	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-16.763;DP=718;FS=9.605;HRun=3;HaplotypeScore=66.2286;InbreedingCoeff=0.9996;MQ=83.85;MQ0=0;MQRankSum=-1.052;QD=37.51;ReadPosRankSum=0.287;VQSLOD=4.7875;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,111,1318	0/0:11,0:11:27.08:0,27,324	0/0:24,0:23:69.12:0,69,776	0/0:20,0:20:44.33:0,44,489	0/0:22,0:22:66.17:0,66,768	0/0:17,0:17:51.16:0,51,612	0/0:26,0:26:75.23:0,75,900	1/1:6,24:30:72.21:957,72,0	0/0:26,0:26:78.20:0,78,909	0/0:41,0:41:99:0,117,1394	0/0:27,0:27:81.23:0,81,959	0/0:16,0:16:42.13:0,42,504	0/0:27,0:27:75.23:0,75,900	0/0:27,0:27:81.25:0,81,971	0/0:29,0:29:87.25:0,87,1033	0/0:40,0:40:99:0,114,1346	0/0:30,0:30:87.25:0,87,1032	0/0:12,0:12:33.10:0,33,395	1/1:3,25:28:81.27:1127,81,0	1/1:3,33:36:99:1385,99,0	1/1:1,28:29:84.28:1174,84,0	0/0:27,0:27:78.24:0,78,936	0/0:24,0:24:72.20:0,72,840	0/0:22,0:22:57.13:0,57,667	0/0:23,0:23:66.20:0,66,792	1/1:3,23:26:33.20:868,33,0	1/1:0,26:26:72.24:1008,72,0	1/1:0,10:10:30.10:420,30,0
chr10	41400466	.	G	GCA	1691.86	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-5.119;DP=533;FS=2.763;HRun=0;HaplotypeScore=96.4770;InbreedingCoeff=0.9260;MQ=60.24;MQ0=25;MQRankSum=2.654;QD=14.84;ReadPosRankSum=-2.425;VQSLOD=3.0237;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:63.20:0,63,833	0/0:5,0:5:9.03:0,9,122	0/0:44,0:14:35.94:0,36,440	0/0:52,0:25:50.96:0,51,685	0/0:18,0:18:33.10:0,33,427	0/0:13,0:13:30.10:0,30,415	0/0:31,0:30:60.20:0,60,829	1/1:4,12:17:39.11:512,39,0	0/0:16,0:16:36.12:0,36,485	0/0:19,0:18:54.17:0,54,713	0/0:11,0:11:23.74:0,24,328	0/0:15,0:13:24.08:0,24,325	0/0:9,0:9:24.07:0,24,305	0/0:17,0:16:29.83:0,30,354	0/0:8,0:8:15.05:0,15,207	0/0:25,0:23:48.09:0,48,572	0/0:24,0:23:43.29:0,43,598	0/0:13,0:13:30.09:0,30,383	1/1:1,5:5:14.91:182,15,0	1/1:15,0:15:17.83:250,18,0	1/1:9,34:41:3.01:46,3,0	0/0:20,0:20:39.09:0,39,492	0/0:14,0:14:26.95:0,27,359	0/0:22,0:22:29.15:0,29,396	0/0:10,0:10:24.08:0,24,318	1/1:2,14:16:45.15:657,45,0	1/1:4,8:12:9.37:99,9,0	1/1:4,0:4:9.03:132,9,0
chr10	41400469	.	CGTGTGTGTGTGTGTGTGTGTGTGTGT	C	1171.27	PASS	AB=0.822;AC=7;AF=0.130;AN=54;BaseQRankSum=4.734;DP=541;FS=7.482;HRun=0;HaplotypeScore=257.7322;InbreedingCoeff=0.2889;MQ=56.13;MQ0=29;MQRankSum=-2.745;QD=9.60;ReadPosRankSum=-1.440;VQSLOD=1.4208;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:32,5:36:2.08:199,2,0	0/0:6,0:6:10.59:0,11,838	./.	0/0:49,0:22:1.25:0,1,41	0/1:15,0:19:56.95:95,0,57	0/0:11,0:13:6.02:0,6,244	0/0:29,0:29:16.27:0,16,359	0/0:15,0:15:12.03:0,12,336	0/0:15,0:15:18.06:0,18,489	0/0:20,0:19:17.24:0,17,627	0/0:12,0:11:15.05:0,15,727	0/0:14,0:12:12.04:0,12,466	0/0:7,0:10:8.06:0,8,139	0/1:14,0:17:92.93:188,0,93	0/0:9,0:9:6.02:0,6,303	1/1:20,5:23:11.84:803,12,0	0/0:21,0:22:24.05:0,24,839	0/0:12,0:15:6.02:0,6,239	0/0:8,0:7:9.03:0,9,292	0/0:10,0:13:12.04:0,12,498	0/0:37,0:36:0.47:0,0,1	0/1:18,0:23:6.29:6,0,422	0/0:14,0:18:15.50:0,16,430	0/0:25,0:25:9.03:0,9,406	0/0:9,0:10:15.05:0,15,580	0/0:16,0:15:24.08:0,24,708	0/0:13,0:12:6.16:0,6,171	0/0:4,0:4:0:0,0,0
chr10	41401535	.	TA	T	6908.18	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=7.076;DP=616;FS=1.796;HRun=10;HaplotypeScore=69.6909;InbreedingCoeff=0.9778;MQ=75.28;MQ0=0;MQRankSum=-1.365;QD=21.66;ReadPosRankSum=-0.069;VQSLOD=5.6699;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,29:30:77.98:677,78,0	0/0:12,0:12:30.07:0,30,324	0/0:19,0:18:21.54:0,22,216	0/0:10,0:10:14.42:0,14,119	0/0:3,0:38:96.84:0,97,493	0/0:23,1:25:48.98:0,49,751	0/0:17,0:17:42.10:0,42,457	1/1:7,30:37:91.98:781,92,0	0/0:17,1:18:19.05:0,19,428	1/1:0,19:19:56.97:490,57,0	1/1:1,21:23:58.95:501,59,0	0/0:15,0:15:45.10:0,45,486	0/0:19,2:21:5.04:0,5,511	0/0:2,0:19:42.61:0,43,213	1/1:2,19:21:53.99:469,54,0	1/1:0,21:21:62.99:547,63,0	0/0:26,0:26:78.21:0,78,863	1/1:6,14:20:41.99:365,42,0	1/1:3,11:14:32.97:281,33,0	1/1:10,28:40:79.02:663,79,0	1/1:1,9:10:21:182,21,0	0/0:23,0:23:57.15:0,57,630	0/0:27,0:27:72.19:0,72,796	0/0:26,1:27:46.14:0,46,737	1/1:0,27:27:71.99:625,72,0	1/1:1,19:20:56.99:495,57,0	1/1:3,27:30:74.98:651,75,0	1/1:0,7:7:21:182,21,0
chr10	41402266	.	T	TA	141.43	PASS	AB=0.859;AC=3;AF=0.060;AN=50;BaseQRankSum=-0.009;DP=155;FS=2.643;HRun=2;HaplotypeScore=16.9558;InbreedingCoeff=-0.1281;MQ=52.53;MQ0=2;MQRankSum=-3.834;QD=3.45;ReadPosRankSum=-0.442;VQSLOD=-0.0389;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:14,1:15:28.76:0,29,509	0/0:3,0:3:9.03:0,9,117	./.	./.	0/0:1,0:3:8.92:0,9,77	0/0:2,0:6:8.92:0,9,77	./.	0/1:28,3:31:48.02:48,0,850	0/0:2,0:2:6.02:0,6,78	0/0:3,0:3:9.03:0,9,117	0/0:2,0:2:6.01:0,6,65	0/0:2,0:5:11.93:0,12,116	0/0:1,0:3:1.20:0,1,35	0/0:3,0:3:9.03:0,9,116	0/0:3,0:3:9.02:0,9,103	0/0:3,0:3:6.02:0,6,78	0/0:8,0:11:10.64:0,11,173	0/0:8,0:8:24.08:0,24,311	0/0:3,0:3:9.03:0,9,117	0/0:4,0:4:10.26:0,10,106	0/1:2,0:2:17.84:35,0,18	0/0:3,0:3:6.02:0,6,78	0/0:2,0:2:6.02:0,6,77	0/0:3,0:3:9.03:0,9,116	0/0:10,0:10:30.08:0,30,373	0/0:1,0:1:3.01:0,3,39	0/0:6,0:6:18.05:0,18,219	0/1:4,4:8:99:155,0,131
chr10	41404036	.	TG	T	5256.65	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=12.867;DP=782;FS=1.109;HRun=2;HaplotypeScore=73.0435;InbreedingCoeff=0.9981;MQ=89.75;MQ0=0;MQRankSum=-5.950;QD=35.28;ReadPosRankSum=3.589;VQSLOD=5.3609;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,102,1505	0/0:7,0:7:18.06:0,18,268	0/0:25,0:25:68.94:0,69,939	0/0:34,0:34:88.25:0,88,1250	0/0:22,0:22:66.22:0,66,986	1/1:1,29:30:81.26:1052,81,0	1/1:0,25:25:69.22:896,69,0	0/0:40,0:40:99:0,120,1779	1/1:1,41:42:99:1480,114,0	0/0:42,0:42:99:0,123,1810	0/0:25,0:25:75.25:0,75,1118	0/0:18,0:18:54.17:0,54,789	1/1:0,31:31:81.26:1051,81,0	0/0:29,0:29:87.28:0,87,1268	0/0:34,0:34:99:0,102,1486	0/0:34,0:34:99:0,99,1438	0/0:19,0:19:57.16:0,57,806	0/0:14,0:14:39.13:0,39,579	0/0:27,0:27:72.22:0,72,1035	0/0:34,0:34:99:0,99,1458	0/0:32,0:32:96.31:0,96,1416	1/1:0,21:21:60.20:779,60,0	0/0:37,0:37:99:0,111,1613	0/0:21,0:21:63.18:0,63,886	0/0:29,0:29:87.26:0,87,1261	0/0:34,0:34:99:0,102,1501	0/0:30,0:30:90.30:0,90,1345	0/0:12,0:12:36.08:0,36,495
chr10	41404180	.	GA	G	5319.39	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=11.964;DP=713;FS=3.100;HRun=1;HaplotypeScore=70.9586;InbreedingCoeff=0.9998;MQ=95.76;MQ0=0;MQRankSum=-2.210;QD=38.55;ReadPosRankSum=3.086;VQSLOD=5.6718;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:90.27:0,90,1385	0/0:12,0:12:36.12:0,36,574	0/0:40,0:39:99:0,116,1727	0/0:30,0:30:87.28:0,87,1333	0/0:27,0:27:81.22:0,81,1259	1/1:0,36:36:99:1425,102,0	1/1:0,27:27:78.26:1090,78,0	0/0:35,0:35:99:0,105,1574	1/1:0,29:29:84.28:1171,84,0	0/0:24,0:24:72.25:0,72,1151	0/0:25,0:25:66.21:0,66,1013	0/0:22,0:22:66.21:0,66,1029	1/1:0,23:23:60.20:839,60,0	0/0:29,0:29:87.22:0,87,1290	0/0:30,0:29:90.27:0,90,1411	0/0:26,0:26:78.27:0,78,1246	0/0:16,0:16:48.15:0,48,743	0/0:13,0:13:39.13:0,39,607	0/0:21,0:21:63.20:0,63,968	0/0:25,0:25:66.21:0,66,1031	0/0:28,0:28:84.26:0,84,1317	1/1:0,23:23:60.11:795,60,0	0/0:23,0:23:69.24:0,69,1099	0/0:32,0:32:96.31:0,96,1485	0/0:29,0:29:87.19:0,87,1310	0/0:21,0:21:63.21:0,63,981	0/0:27,0:27:81.25:0,81,1240	0/0:10,0:10:30.10:0,30,479
chr10	41404475	.	T	TACAC	3606.62	PASS	AB=0.929;AC=36;AF=0.720;AN=50;BaseQRankSum=1.604;DP=563;FS=1.722;HRun=0;HaplotypeScore=140.4434;InbreedingCoeff=0.4061;MQ=63.55;MQ0=13;MQRankSum=-0.951;QD=9.02;ReadPosRankSum=-2.025;VQSLOD=2.8184;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:18:3.01:52,3,0	0/0:5,0:5:9.02:0,9,123	0/0:39,0:23:3.01:0,3,37	0/0:28,0:20:1.09:0,1,23	1/1:22,0:22:18.86:361,19,0	0/1:16,6:22:0:0,0,0	0/0:28,0:28:2.50:0,2,9	1/1:26,0:26:22.89:309,23,0	1/1:21,0:20:8.97:116,9,0	1/1:15,12:28:44.43:911,44,0	1/1:17,0:27:2.90:16,3,0	1/1:22,0:22:3.01:60,3,0	1/1:21,0:21:24.06:384,24,0	./.	1/1:24,0:22:11.60:239,12,0	1/1:15,0:19:3.88:53,4,0	0/1:12,0:13:29.87:125,0,30	1/1:7,0:4:3.01:51,3,0	1/1:9,0:8:12.02:174,12,0	0/1:22,0:21:0:0,0,0	./.	0/1:23,0:21:0:0,0,0	1/1:17,0:16:12.02:199,12,0	1/1:29,0:29:5.98:46,6,0	0/0:18,0:18:0.26:0,0,1	1/1:23,0:23:32.94:459,33,0	./.	1/1:7,0:7:3.01:52,3,0
chr10	41404523	.	A	AT	99.67	PASS	AB=0.925;AC=5;AF=0.096;AN=52;BaseQRankSum=5.238;DP=472;FS=22.531;HRun=0;HaplotypeScore=106.7154;InbreedingCoeff=0.1378;MQ=38.02;MQ0=17;MQRankSum=-3.739;QD=1.40;ReadPosRankSum=1.776;VQSLOD=0.7674;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:12:2.55:0,3,41	0/0:7,0:7:12.04:0,12,167	0/0:5,0:1:3.01:0,3,40	./.	0/0:21,0:21:24.06:0,24,297	1/1:11,2:13:0.63:2,1,0	0/0:17,0:16:3.01:0,3,41	0/0:25,0:24:69.02:0,69,920	0/0:20,0:19:21.41:0,21,223	0/0:22,0:21:55.06:0,55,736	0/0:27,0:27:15.04:0,15,188	0/0:25,0:25:25.87:0,26,283	0/1:25,0:25:30.31:30,0,179	0/0:14,0:13:5.94:0,6,45	0/0:27,0:26:17.99:0,18,225	0/0:14,0:14:11.24:0,11,110	0/0:12,0:10:20.68:0,21,196	0/0:10,0:6:12:0,12,139	0/0:17,0:16:35.74:0,36,532	0/1:11,2:13:0:0,0,0	./.	0/0:25,0:22:8.99:0,9,106	0/0:22,0:22:20.98:0,21,260	0/0:21,0:21:20.92:0,21,211	0/0:27,0:27:14.91:0,15,177	0/1:18,2:20:99:156,0,457	0/0:12,0:12:15.05:0,15,208	0/0:3,0:3:6.02:0,6,84
chr10	41405466	.	CTTTTT	C	3187.71	PASS	AB=0.556;AC=18;AF=0.321;AN=56;BaseQRankSum=1.222;DP=462;FS=6.585;HRun=17;HaplotypeScore=107.5043;InbreedingCoeff=0.6081;MQ=59.17;MQ0=19;MQRankSum=-3.671;QD=19.92;ReadPosRankSum=5.679;VQSLOD=0.7879;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:43:84.21:0,84,1675	0/0:6,0:6:9.03:0,9,202	0/0:32,0:14:11.37:0,11,163	0/0:19,0:14:14.95:0,15,177	0/0:13,0:13:0:0,0,1	0/1:1,2:20:6.99:156,0,7	0/1:5,0:13:40.39:54,0,40	0/0:17,0:17:0:0,0,2	0/0:9,0:20:21.26:0,21,196	1/1:4,6:9:17.87:271,18,0	1/1:8,7:17:17.68:228,18,0	1/1:2,14:17:44.99:659,45,0	0/0:8,0:14:19.20:0,19,172	0/0:10,0:9:1.82:0,2,6	1/1:5,13:18:10.89:439,11,0	0/0:15,0:13:33.11:0,33,662	0/0:18,0:32:69.64:0,70,1412	1/1:5,6:16:10.98:285,11,0	0/0:10,0:9:1.55:0,2,5	0/0:10,0:10:1.82:0,2,6	0/0:12,0:11:3.01:0,3,82	0/0:7,0:14:21.59:0,22,171	1/1:3,14:21:25.48:594,25,0	1/1:8,8:15:27.30:406,27,0	1/1:1,7:8:18.01:271,18,0	0/0:14,0:14:0:0,0,2	0/0:12,0:12:0:0,0,1	0/0:4,0:1:0:0,0,0
chr10	41406040	.	AG	A	8795.65	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=8.886;DP=780;FS=21.525;HRun=2;HaplotypeScore=112.2835;InbreedingCoeff=0.9998;MQ=79.98;MQ0=0;MQRankSum=-5.796;QD=37.59;ReadPosRankSum=4.051;VQSLOD=2.8864;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,46:46:99:1714,132,0	0/0:11,0:11:30.10:0,30,450	0/0:29,0:29:81.27:0,81,1175	0/0:14,0:14:33.02:0,33,430	0/0:25,0:25:75.23:0,75,1086	0/0:26,0:26:78.22:0,78,1144	0/0:30,0:30:87.27:0,87,1256	0/0:31,0:31:84.28:0,84,1241	0/0:33,0:33:99:0,99,1484	1/1:0,29:29:87.28:1128,87,0	1/1:0,28:28:81.26:1052,81,0	0/0:25,0:25:72.21:0,72,1038	0/0:25,0:25:75.25:0,75,1124	0/0:32,0:32:96.33:0,96,1439	1/1:0,27:27:78.25:1013,78,0	1/1:1,27:28:39.30:1007,39,0	1/1:0,30:30:90.29:1169,90,0	1/1:0,24:24:72.23:935,72,0	0/0:37,0:37:99:0,108,1578	0/0:30,0:30:84.28:0,84,1257	0/0:39,0:39:99:0,111,1635	0/0:32,0:32:93.32:0,93,1394	0/0:23,0:23:66.21:0,66,970	0/0:31,0:31:90.30:0,90,1349	1/1:0,22:22:60.20:779,60,0	0/0:38,2:40:42.46:0,42,1613	0/0:22,0:22:66.22:0,66,989	0/0:11,0:11:33.11:0,33,494
chr10	41407316	.	G	GA	4417.28	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-10.774;DP=593;FS=8.189;HRun=8;HaplotypeScore=54.4050;InbreedingCoeff=0.9990;MQ=84.23;MQ0=0;MQRankSum=-3.304;QD=25.68;ReadPosRankSum=3.403;VQSLOD=5.4945;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:38,1:39:70.39:0,70,890	0/0:10,0:10:24:0,24,220	0/0:21,0:21:42.55:0,43,448	0/0:14,0:14:26.89:0,27,223	0/0:23,0:23:66.02:0,66,599	1/1:1,18:19:54.16:623,54,0	1/1:5,20:25:45.13:519,45,0	0/0:34,1:35:58.40:0,58,778	1/1:6,15:21:42.12:485,42,0	0/0:19,0:19:39:0,39,351	0/0:18,0:18:36.01:0,36,329	1/1:2,15:17:39.12:450,39,0	1/1:2,15:17:39.12:450,39,0	0/0:13,0:13:36:0,36,324	0/0:19,0:19:54.02:0,54,490	0/0:21,0:21:54.03:0,54,494	0/0:31,0:31:75:0,75,680	0/0:14,0:15:44.06:0,44,390	0/0:16,0:17:35.03:0,35,308	0/0:30,0:30:72:0,72,648	0/0:24,0:25:71.06:0,71,632	1/1:6,24:30:66.11:726,66,0	1/1:3,19:22:51.15:589,51,0	1/1:5,16:21:51.12:575,51,0	0/0:24,0:24:66.03:0,66,604	0/0:24,0:24:63.01:0,63,568	0/0:15,0:15:42.01:0,42,381	0/0:8,0:8:23.99:0,24,214
chr10	41407637	.	C	CT	3380.82	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-4.474;DP=653;FS=1.444;HRun=3;HaplotypeScore=71.5538;InbreedingCoeff=0.9935;MQ=85.45;MQ0=0;MQRankSum=-1.898;QD=38.86;ReadPosRankSum=4.488;VQSLOD=3.5935;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,117,1379	0/0:11,0:11:30.09:0,30,359	0/0:17,0:17:44.86:0,45,508	0/0:29,0:29:79.48:0,79,930	0/0:14,0:14:39.12:0,39,468	0/0:22,0:22:63.19:0,63,756	0/0:18,0:18:45.12:0,45,529	0/0:29,0:29:81.23:0,81,953	0/0:33,0:33:96.27:0,96,1128	0/0:12,0:12:33.10:0,33,396	0/0:11,0:11:33.10:0,33,396	1/1:2,31:33:93.27:1280,93,0	0/0:34,0:34:96.27:0,96,1135	0/0:28,0:28:75.23:0,75,900	0/0:28,0:28:75.23:0,75,900	0/0:28,0:28:81.22:0,81,949	0/0:38,0:38:99:0,111,1264	0/0:18,0:18:48.15:0,48,573	0/0:18,0:18:51.15:0,51,601	0/0:11,0:11:27.08:0,27,324	0/0:46,0:46:99:0,132,1570	0/0:22,0:22:60.18:0,60,719	1/1:0,13:13:36.12:504,36,0	1/1:0,41:41:99:1597,114,0	0/0:17,0:17:45.12:0,45,529	0/0:18,0:18:51.16:0,51,609	0/0:19,0:19:57.16:0,57,671	0/0:5,0:5:15.05:0,15,180
chr10	41408324	.	G	GC	94.74	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=5.864;DP=514;FS=9.677;HRun=0;HaplotypeScore=80.5711;InbreedingCoeff=0.5790;MQ=39.20;MQ0=104;MQRankSum=0.148;QD=0.67;ReadPosRankSum=-3.823;VQSLOD=-0.4914;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:28:62.99:0,63,794	0/0:9,0:7:15.05:0,15,199	0/0:29,0:2:5.89:0,6,57	0/0:37,0:5:15.05:0,15,208	1/1:10,1:8:2.05:12,2,0	1/1:6,0:3:3.22:13,3,0	0/1:21,0:15:9.62:26,0,10	0/0:33,0:31:90.27:0,90,1189	1/1:12,0:4:0.94:1,1,0	0/0:22,0:19:51.08:0,51,673	0/1:9,0:9:2.56:3,0,114	1/1:10,4:7:5.81:54,6,0	0/1:8,0:4:0:0,0,0	1/1:10,2:10:7.59:49,8,0	0/0:25,0:19:26.69:0,27,482	0/0:7,0:7:12.02:0,12,149	0/0:29,0:23:57.28:0,57,684	0/0:15,0:13:30.03:0,30,390	0/0:18,0:10:24.08:0,24,327	0/0:13,0:11:21:0,21,269	0/0:38,0:36:39.01:0,39,589	1/1:13,0:7:2.91:14,3,0	0/0:7,0:4:0.47:0,0,1	1/1:20,4:17:6.79:70,7,0	0/0:21,0:20:39.13:0,39,538	0/0:16,0:12:36.12:0,36,483	0/0:8,0:6:17.33:0,17,182	0/0:4,0:2:3.01:0,3,42
chr10	41409731	.	CTGTG	C	1712.02	PASS	AB=0.816;AC=28;AF=0.538;AN=52;BaseQRankSum=-2.052;DP=655;FS=1.552;HRun=0;HaplotypeScore=146.5497;InbreedingCoeff=0.1704;MQ=61.39;MQ0=20;MQRankSum=-1.858;QD=3.87;ReadPosRankSum=0.343;VQSLOD=2.6485;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:47:20.17:0,20,321	0/0:2,0:2:6.02:0,6,125	0/0:36,0:19:0:0,0,0	./.	0/1:8,0:9:0:0,0,0	0/1:17,0:15:34.55:35,0,49	1/1:22,0:22:8.57:60,9,0	./.	0/1:14,1:23:16.50:38,0,16	0/1:16,6:23:99:155,0,118	0/1:9,0:10:0:0,0,0	1/1:13,11:25:17.08:214,17,0	1/1:15,1:25:0.15:147,0,0	0/0:19,0:26:21.05:0,21,354	0/1:21,9:31:70.27:70,0,72	0/0:18,0:29:8.93:0,9,84	1/1:28,0:32:5.52:55,6,0	0/1:15,2:21:80.58:183,0,81	1/1:20,0:18:9.01:89,9,0	0/1:8,0:13:0.12:0,0,0	0/1:37,15:46:4.32:114,0,4	0/1:14,0:18:17.60:18,0,144	0/0:7,1:9:0:0,0,0	1/1:27,13:41:26.16:402,26,0	0/0:6,0:9:2.74:0,3,12	1/1:19,1:20:5.35:55,5,0	1/1:16,7:22:14.11:176,14,0	1/1:4,1:5:3.48:47,3,0
chr10	41410049	.	CACCCT	C	6960.03	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=14.525;DP=732;FS=2.789;HRun=0;HaplotypeScore=138.0318;InbreedingCoeff=0.9927;MQ=92.73;MQ0=0;MQRankSum=-9.216;QD=54.80;ReadPosRankSum=1.250;VQSLOD=5.2514;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:56:99:0,169,5250	0/0:12,0:12:36.11:0,36,1090	0/0:39,0:39:99:0,117,3556	0/0:25,0:25:66.20:0,66,1947	1/1:0,26:26:69.24:1513,69,0	0/0:22,0:22:66.23:0,66,2132	0/0:27,0:27:75.26:0,75,2423	0/0:28,0:28:81.28:0,81,2531	0/0:21,0:21:63.22:0,63,2025	0/0:32,0:32:93.32:0,93,2921	0/0:15,0:15:36.12:0,36,1161	1/1:0,26:26:72.25:1604,72,0	0/0:27,0:27:81.28:0,81,2573	1/1:1,35:36:99:2182,99,0	0/0:33,0:33:96.26:0,96,2790	0/0:26,0:26:75.26:0,75,2328	0/0:30,0:30:90.27:0,90,2736	0/0:19,0:19:57.20:0,57,1842	0/0:18,0:18:54.19:0,54,1707	0/0:33,0:33:99:0,99,3196	0/0:26,0:26:78.27:0,78,2446	0/0:37,0:37:99:0,108,3420	1/1:0,15:15:42.14:925,42,0	1/1:2,22:24:33.57:736,34,0	0/0:17,0:17:51.15:0,51,1567	0/0:24,0:24:69.24:0,69,2179	0/0:34,0:34:99:0,102,3249	0/0:4,0:4:12.04:0,12,388
chr10	41410897	.	CA	C	5319.14	PASS	AB=0.947;AC=54;AF=0.964;AN=56;BaseQRankSum=1.856;DP=636;FS=8.025;HRun=1;HaplotypeScore=142.7031;InbreedingCoeff=-0.0388;MQ=83.04;MQ0=3;MQRankSum=-2.258;QD=8.36;ReadPosRankSum=5.616;VQSLOD=2.1334;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:28,1:28:35.01:194,35,0	1/1:15,0:15:39.32:162,39,0	0/1:20,0:19:14.48:94,0,14	0/1:15,2:17:41.37:92,0,41	1/1:11,0:11:20.55:79,21,0	1/1:24,0:24:56.68:222,57,0	1/1:22,0:22:46.73:182,47,0	1/1:29,0:29:74.92:290,75,0	1/1:24,0:24:59.80:234,60,0	1/1:27,1:28:71.63:322,72,0	1/1:17,0:17:9.68:97,10,0	1/1:22,0:22:45.22:175,45,0	1/1:23,0:23:28.76:169,29,0	1/1:27,0:27:52.01:203,52,0	1/1:34,2:36:56.50:280,56,0	1/1:32,1:33:52.37:264,52,0	1/1:25,0:25:49.33:192,49,0	1/1:18,0:18:31.16:122,31,0	1/1:24,0:24:60.79:271,61,0	1/1:20,0:20:31.93:182,32,0	1/1:22,0:22:49.33:192,49,0	1/1:22,1:23:33.03:188,33,0	1/1:18,0:18:33.83:132,34,0	1/1:29,0:29:67.51:263,68,0	1/1:15,0:15:33.75:132,34,0	1/1:29,0:28:60.75:263,61,0	1/1:29,0:29:64.91:253,65,0	1/1:7,0:7:18.17:71,18,0
chr10	41412632	.	CTG	C	2299.84	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=10.840;DP=591;FS=2.532;HRun=0;HaplotypeScore=82.3503;InbreedingCoeff=0.9862;MQ=82.03;MQ0=1;MQRankSum=-1.948;QD=35.93;ReadPosRankSum=2.560;VQSLOD=5.6923;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:93.32:0,93,1882	0/0:6,0:6:18.05:0,18,330	0/0:19,0:19:52.06:0,52,1001	0/0:22,0:22:43.45:0,43,792	0/0:24,0:24:72.25:0,72,1453	0/0:21,0:21:63.20:0,63,1244	0/0:21,0:21:63.22:0,63,1280	0/0:22,0:22:66.22:0,66,1302	0/0:26,0:26:78.26:0,78,1551	0/0:32,0:32:96.33:0,96,1950	0/0:12,0:12:36.12:0,36,729	1/1:0,18:18:51.17:830,51,0	0/0:20,0:20:60.21:0,60,1218	0/0:21,0:21:63.22:0,63,1249	0/0:27,0:27:81.27:0,81,1597	0/0:18,0:18:54.19:0,54,1097	0/0:26,0:26:78.27:0,78,1584	0/0:13,0:13:39.08:0,39,700	0/0:17,0:17:51.15:0,51,978	0/0:19,0:19:57.18:0,57,1122	0/0:33,0:33:99:0,99,1939	0/0:20,0:19:57.16:0,57,1117	1/1:0,18:18:42.06:637,42,0	1/1:0,28:28:60.15:976,60,0	0/0:19,0:19:57.20:0,57,1158	0/0:24,0:24:72.24:0,72,1405	0/0:30,0:30:90.31:0,90,1828	0/0:4,0:4:12.04:0,12,224
chr10	41413667	.	A	AT	2741.05	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-10.605;DP=583;FS=3.254;HRun=7;HaplotypeScore=55.4696;InbreedingCoeff=0.9973;MQ=73.67;MQ0=0;MQRankSum=-0.005;QD=27.69;ReadPosRankSum=1.105;VQSLOD=4.4286;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:60.80:0,61,618	0/0:11,0:11:30.05:0,30,289	0/0:15,0:15:36.02:0,36,334	0/0:11,0:11:17.18:0,17,195	1/1:1,27:28:75.16:888,75,0	0/0:32,0:32:87.12:0,87,834	0/0:26,0:26:72.07:0,72,679	0/0:26,0:26:69.09:0,69,655	0/0:23,0:23:69.11:0,69,666	0/0:27,0:27:72.11:0,72,691	0/0:24,0:24:66.11:0,66,637	1/1:3,15:18:45.14:544,45,0	0/0:27,0:27:72.11:0,72,695	1/1:3,15:18:42.13:507,42,0	0/0:25,0:25:72.10:0,72,690	0/0:17,0:17:48.08:0,48,463	0/0:16,0:16:45.07:0,45,434	0/0:11,0:11:30.05:0,30,289	0/0:22,0:22:51.07:0,51,488	0/0:19,0:19:45.07:0,45,435	0/0:18,0:18:48.01:0,48,452	0/0:11,0:11:33.05:0,33,319	1/1:5,16:21:45.14:543,45,0	1/1:1,13:14:36.11:435,36,0	0/0:21,0:21:63.06:0,63,594	0/0:22,0:22:60.09:0,60,579	0/0:43,0:43:99:0,120,1145	0/0:12,0:12:32.97:0,33,306
chr10	41414884	.	GT	G	797.74	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.076;DP=391;FS=0.715;HRun=7;HaplotypeScore=39.1808;InbreedingCoeff=0.8074;MQ=72.87;MQ0=0;MQRankSum=-1.209;QD=24.93;ReadPosRankSum=0.132;VQSLOD=3.2817;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,22:24:66.15:673,66,0	0/0:3,0:3:9.03:0,9,113	0/0:5,0:5:8.89:0,9,91	0/0:7,0:7:15.85:0,16,167	0/0:25,0:25:66.21:0,66,830	0/0:20,0:20:57.18:0,57,717	0/0:5,0:5:15.05:0,15,188	0/0:31,0:31:87.28:0,87,1094	0/0:16,0:16:48.15:0,48,594	0/0:18,0:18:48.15:0,48,604	0/0:30,0:30:87.25:0,87,1057	0/0:11,0:11:30.10:0,30,378	0/0:16,0:16:42.13:0,42,528	0/0:8,0:8:24.08:0,24,302	0/0:11,0:11:30.10:0,30,377	1/1:0,8:8:24.05:245,24,0	0/0:24,0:24:57.18:0,57,717	0/0:22,0:22:63.20:0,63,790	0/0:25,0:25:75.24:0,75,944	0/0:16,0:16:48.15:0,48,604	0/0:1,0:1:3.01:0,3,38	0/0:6,0:6:18.06:0,18,226	0/0:10,0:10:24.08:0,24,302	0/0:2,0:2:6.02:0,6,75	0/0:11,0:10:33.08:0,33,399	0/0:16,0:16:45.14:0,45,566	0/0:13,0:13:36.12:0,36,452	0/0:7,0:7:21.07:0,21,264
chr10	41414965	.	CTG	C	451.36	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.937;DP=490;FS=18.732;HRun=0;HaplotypeScore=58.2845;InbreedingCoeff=0.9758;MQ=85.16;MQ0=0;MQRankSum=-1.136;QD=28.21;ReadPosRankSum=1.347;VQSLOD=3.1962;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:60.18:0,60,1038	0/0:5,0:5:15.05:0,15,270	0/0:20,0:20:50.38:0,50,832	0/0:11,0:11:32.60:0,33,549	0/0:31,0:31:87.30:0,87,1566	0/0:15,0:15:42.14:0,42,756	0/0:8,0:8:24.05:0,24,373	0/0:30,0:30:81.27:0,81,1432	0/0:22,0:22:63.22:0,63,1133	0/0:23,0:23:66.23:0,66,1189	0/0:29,0:29:78.27:0,78,1405	0/0:9,0:9:24.08:0,24,427	0/0:20,0:20:60.21:0,60,1061	0/0:17,0:17:51.16:0,51,889	0/0:17,0:17:48.16:0,48,864	0/0:12,0:12:36.12:0,36,648	1/1:0,16:16:39.13:546,39,0	0/0:16,0:16:48.16:0,48,864	0/0:27,0:27:72.24:0,72,1270	0/0:21,0:21:57.20:0,57,1027	0/0:7,0:7:21.07:0,21,358	0/0:18,0:18:54.18:0,54,960	0/0:18,0:18:51.17:0,51,912	0/0:12,0:12:36.11:0,36,618	0/0:16,0:16:48.15:0,48,834	0/0:16,0:16:48.16:0,48,838	0/0:23,0:23:69.24:0,69,1235	0/0:11,0:11:33.11:0,33,594
chr10	41415347	.	CGTGTGTGTGT	C	2292.87	PASS	AB=0.664;AC=12;AF=0.214;AN=56;BaseQRankSum=1.472;DP=670;FS=5.809;HRun=0;HaplotypeScore=208.3255;InbreedingCoeff=0.6663;MQ=55.74;MQ0=13;MQRankSum=-7.485;QD=16.62;ReadPosRankSum=0.920;VQSLOD=2.3097;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:40:69.18:0,69,2608	0/0:7,0:7:12.04:0,12,426	0/0:27,0:11:2.97:0,3,20	0/0:28,0:9:9.01:0,9,87	0/0:9,19:29:2.57:0,3,14	1/1:6,14:20:12.04:363,12,0	0/1:6,13:19:41.91:173,0,42	0/1:14,0:21:7.17:7,0,208	1/1:3,10:13:12.04:363,12,0	0/0:15,0:23:59.46:0,59,1859	0/0:11,0:18:30.03:0,30,1037	0/0:18,0:18:39.06:0,39,1263	1/1:4,15:21:26.82:758,27,0	1/1:4,18:23:24.08:705,24,0	0/0:11,0:24:33.06:0,33,1088	0/0:5,0:17:12.04:0,12,525	0/0:9,0:21:26.73:0,27,556	0/0:13,0:27:45.14:0,45,1692	0/0:21,0:24:23.42:0,23,366	0/0:16,0:28:45.07:0,45,1104	0/0:24,0:34:56.11:0,56,1223	1/1:4,16:20:3.01:91,3,0	0/0:5,0:30:39.05:0,39,1214	0/0:1,0:31:42.14:0,42,1518	0/0:8,0:21:30.10:0,30,1312	0/0:14,0:29:42.88:0,43,1118	0/0:14,0:31:45.57:0,46,1279	0/0:6,0:15:30.10:0,30,942
chr10	41416140	.	T	TC	2090.05	PASS	AB=1.000;AC=45;AF=0.804;AN=56;BaseQRankSum=-2.231;DP=257;FS=11.341;HRun=12;HaplotypeScore=45.1237;InbreedingCoeff=0.3456;MQ=79.43;MQ0=0;MQRankSum=-0.375;QD=8.93;ReadPosRankSum=1.709;VQSLOD=1.0288;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:12,0:12:1.27:25,1,0	0/0:3,0:3:0.42:0,0,1	0/1:12,0:10:5.36:5,0,16	0/0:11,0:8:4.43:0,4,28	1/1:12,0:12:11.90:90,12,0	1/1:17,0:17:26.74:157,27,0	1/1:19,0:19:41.02:257,41,0	1/1:5,0:5:1.55:4,2,0	1/1:12,0:12:23.77:168,24,0	1/1:5,0:5:5.39:23,5,0	1/1:2,0:2:5.78:31,6,0	1/1:22,0:22:44.29:294,44,0	1/1:12,0:12:26.87:211,27,0	1/1:9,2:11:21.24:151,21,0	1/1:4,0:4:8.55:43,9,0	0/1:10,0:10:7.41:34,0,7	1/1:12,0:12:4.31:42,4,0	1/1:3,0:3:2.90:16,3,0	0/0:6,0:6:2.54:0,3,14	0/0:3,0:3:4.42:0,4,19	1/1:10,0:10:8.99:76,9,0	1/1:11,1:12:17.83:135,18,0	1/1:5,1:6:8.75:66,9,0	1/1:16,0:16:41.07:250,41,0	1/1:6,0:6:8.74:51,9,0	1/1:2,1:3:0.47:1,0,0	0/1:8,0:8:8.25:23,0,8	1/1:3,0:3:8.96:70,9,0
chr10	41416146	.	C	CA	3517.15	PASS	AB=1.000;AC=22;AF=0.393;AN=56;BaseQRankSum=-8.471;DP=254;FS=43.488;HRun=0;HaplotypeScore=39.2596;InbreedingCoeff=0.7066;MQ=82.84;MQ0=0;MQRankSum=0.076;QD=23.93;ReadPosRankSum=8.222;VQSLOD=0.9572;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:8:16.77:0,17,118	0/1:3,0:3:11.95:12,0,37	0/0:13,0:11:29.40:0,29,254	0/0:12,0:9:14.35:0,14,116	1/1:2,9:12:14.95:167,15,0	1/1:0,13:14:27.56:358,28,0	1/1:2,21:23:42.11:550,42,0	0/0:5,0:5:14.96:0,15,123	1/1:0,10:10:24.08:311,24,0	0/0:4,0:4:8.68:0,9,52	0/0:2,0:2:5.42:0,5,23	1/1:3,19:22:30.36:587,30,0	1/1:2,11:13:27.06:343,27,0	1/1:2,8:10:24.02:284,24,0	0/0:3,0:3:8.29:0,8,38	0/0:10,0:10:20.79:0,21,162	0/0:12,0:12:24.99:0,25,216	0/0:1,0:1:2.60:0,3,10	0/1:5,0:5:8:8,0,37	0/0:4,0:4:9.02:0,9,95	0/0:10,0:10:7.17:0,7,53	1/1:1,10:11:20.97:238,21,0	1/1:1,7:8:8.90:106,9,0	1/1:1,15:16:42.12:554,42,0	0/0:7,0:7:4.41:0,4,22	0/0:3,0:3:5.84:0,6,35	0/0:9,0:9:12.03:0,12,144	0/0:4,0:4:0.81:0,1,3
chr10	41416149	.	C	CA	328.98	PASS	AB=1.000;AC=12;AF=0.214;AN=56;BaseQRankSum=-1.801;DP=256;FS=1.769;HRun=0;HaplotypeScore=49.5097;InbreedingCoeff=0.5506;MQ=81.22;MQ0=0;MQRankSum=-2.513;QD=9.40;ReadPosRankSum=1.653;VQSLOD=3.3785;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:7:2.89:0,3,44	0/0:3,0:3:8.94:0,9,65	0/0:12,0:10:23.54:0,24,204	0/0:13,0:10:14.38:0,14,103	0/0:14,0:14:8.05:0,8,77	0/0:14,0:14:15.04:0,15,57	0/0:21,0:21:29.34:0,29,156	0/0:7,0:7:14.95:0,15,121	0/0:10,0:10:5.91:0,6,33	1/1:1,3:4:9.02:104,9,0	1/1:0,2:2:6.02:80,6,0	0/0:21,0:21:35.45:0,35,153	0/0:13,0:13:7.38:0,7,58	0/0:11,0:11:7.12:0,7,48	1/1:1,3:4:9.02:118,9,0	0/0:10,0:10:0.67:0,1,118	0/0:13,0:13:24.61:0,25,212	1/1:0,1:1:3.01:40,3,0	0/0:5,0:5:5.95:0,6,42	0/0:4,0:4:9.01:0,9,94	0/0:9,0:9:9.20:0,9,65	0/1:11,0:11:0.64:1,0,53	0/1:6,0:6:3.98:16,0,4	0/0:17,0:17:35.39:0,35,158	1/1:1,6:7:9.03:119,9,0	0/0:5,0:5:8.85:0,9,55	0/0:8,0:8:11.27:0,11,155	0/0:4,0:4:6.17:0,6,33
chr10	41416377	.	GTCTC	G	638.48	PASS	AB=1.000;AC=5;AF=0.096;AN=52;BaseQRankSum=0.178;DP=448;FS=1.215;HRun=0;HaplotypeScore=96.8633;InbreedingCoeff=0.4120;MQ=67.65;MQ0=9;MQRankSum=-0.309;QD=13.58;ReadPosRankSum=3.110;VQSLOD=3.3497;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:3:0,3,49	0/0:3,0:3:9.03:0,9,197	0/0:43,0:17:6.49:0,6,144	0/0:71,0:26:2.93:0,3,56	0/0:19,0:19:6.02:0,6,122	1/1:5,4:9:12.04:193,12,0	1/1:11,11:23:36.12:557,36,0	0/0:42,0:40:48.15:0,48,899	0/0:11,0:13:9.03:0,9,157	0/0:4,0:4:9.03:0,9,184	./.	0/0:6,0:7:3.01:0,3,52	0/0:17,0:16:8.56:0,9,166	./.	0/0:6,0:9:9.03:0,9,157	0/0:8,0:9:6.02:0,6,104	0/0:15,0:18:8.41:0,8,218	0/0:9,0:10:12.04:0,12,215	0/0:22,0:25:30.10:0,30,624	0/0:3,0:3:3.01:0,3,38	0/0:13,0:13:3.01:0,3,68	0/1:15,0:15:0:0,0,0	0/0:16,0:18:15.05:0,15,288	0/0:5,0:6:3.01:0,3,30	0/0:0,0:1:3.01:0,3,52	0/0:21,0:20:36.12:0,36,775	0/0:13,0:15:8.56:0,9,158	0/0:4,0:4:9.03:0,9,152
chr10	41416428	.	A	AT	7693.30	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-2.753;DP=305;FS=66.097;HRun=6;HaplotypeScore=48.7536;InbreedingCoeff=0.8060;MQ=70.45;MQ0=3;MQRankSum=-2.966;QD=30.41;ReadPosRankSum=3.489;VQSLOD=-0.1797;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,13:15:33.11:412,33,0	0/0:6,0:6:12.02:0,12,122	0/0:19,0:15:23.87:0,24,314	0/0:27,0:15:17.03:0,17,209	1/1:2,15:17:42.13:523,42,0	1/1:2,8:10:24.08:300,24,0	1/1:5,15:20:48.11:586,48,0	1/1:3,16:17:45.10:518,45,0	1/1:1,7:8:21:244,21,0	1/1:0,6:6:18.06:226,18,0	1/1:0,5:5:15.05:189,15,0	1/1:1,9:10:18.06:226,18,0	1/1:2,10:12:33.10:410,33,0	1/1:0,3:3:6.02:75,6,0	1/1:1,9:10:30.04:358,30,0	1/1:0,5:5:15.05:189,15,0	1/1:2,12:14:36.11:450,36,0	1/1:2,6:8:15.05:189,15,0	1/1:7,9:15:33:364,33,0	1/1:0,2:2:6.02:75,6,0	1/1:1,4:5:9.02:104,9,0	1/1:1,10:11:27.09:339,27,0	1/1:1,16:17:48.11:584,48,0	1/1:0,3:3:9.03:113,9,0	1/1:0,2:2:3.01:38,3,0	1/1:2,14:16:42.13:528,42,0	1/1:1,11:12:36.05:431,36,0	1/1:1,6:7:18.06:222,18,0
chr10	41419197	.	AACAG	A	6257.09	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=11.270;DP=632;FS=4.588;HRun=0;HaplotypeScore=108.9670;InbreedingCoeff=0.9887;MQ=66.78;MQ0=5;MQRankSum=-2.138;QD=29.94;ReadPosRankSum=1.896;VQSLOD=4.8569;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:72.20:0,72,1599	0/0:10,0:10:24.04:0,24,487	0/0:39,0:27:21:0,21,336	0/0:22,0:21:33.51:0,34,601	1/1:11,9:20:45.05:633,45,0	1/1:7,8:15:33.09:484,33,0	1/1:12,10:22:45.09:710,45,0	0/0:35,0:35:57.13:0,57,1009	1/1:6,10:16:42.13:658,42,0	0/0:21,0:21:39.13:0,39,893	0/0:20,0:20:42.14:0,42,1010	1/1:13,16:29:39.13:644,39,0	1/1:9,18:27:66.23:1089,66,0	1/1:4,13:17:24.08:396,24,0	0/0:21,0:21:17.11:0,17,757	0/0:21,1:22:10.77:0,11,1198	0/0:24,0:24:57.17:0,57,1312	0/0:25,0:25:60.18:0,60,1408	0/0:23,0:22:30.09:0,30,628	0/0:29,0:29:69.11:0,69,1392	0/0:22,0:22:39.06:0,39,859	1/1:4,18:22:45.05:680,45,0	1/1:9,4:13:18.02:261,18,0	1/1:15,13:28:51.05:703,51,0	0/0:29,0:29:60.16:0,60,1321	0/0:15,0:15:39.11:0,39,819	0/0:23,0:23:49.19:0,49,1281	0/0:8,0:8:18.06:0,18,441
chr10	41419255	.	A	AT	2645.54	PASS	AB=0.849;AC=27;AF=0.482;AN=56;BaseQRankSum=3.276;DP=574;FS=2.870;HRun=12;HaplotypeScore=102.4453;InbreedingCoeff=0.4796;MQ=70.52;MQ0=0;MQRankSum=-3.424;QD=7.69;ReadPosRankSum=-2.060;VQSLOD=2.4319;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,1:37:3.49:0,3,467	0/1:3,1:4:17.16:17,0,54	0/0:15,0:16:8.32:0,8,90	0/0:15,0:10:10.20:0,10,56	1/1:9,0:24:35.73:200,36,0	0/1:3,11:15:4.92:267,0,5	1/1:5,18:23:17.15:328,17,0	0/1:29,1:31:10.94:11,0,162	1/1:5,13:20:41.82:375,42,0	0/0:19,0:20:43.75:0,44,312	0/1:17,2:19:19.41:19,0,200	1/1:16,0:19:35.11:190,35,0	1/1:6,17:23:45.07:438,45,0	1/1:15,0:16:22:119,22,0	0/0:22,5:27:4.22:0,4,355	0/0:20,0:20:41.65:0,42,306	1/1:9,12:22:25.98:390,26,0	0/1:18,3:22:11.60:12,0,244	0/0:20,0:20:17.05:0,17,254	0/1:21,4:25:3.63:4,0,241	0/0:16,0:16:32.73:0,33,236	1/1:6,9:15:24.04:234,24,0	1/1:8,0:19:16.10:94,16,0	1/1:10,1:23:27.77:140,28,0	0/1:24,0:24:5.70:6,0,258	0/0:22,0:22:41.65:0,42,306	0/0:29,0:31:73.60:0,74,531	0/0:5,0:5:2.94:0,3,22
chr10	41420702	.	T	TATCA	7736.15	PASS	AB=0.585;AC=19;AF=0.339;AN=56;BaseQRankSum=6.904;DP=716;FS=8.601;HRun=0;HaplotypeScore=121.7473;InbreedingCoeff=0.9196;MQ=66.11;MQ0=1;MQRankSum=-3.295;QD=27.53;ReadPosRankSum=2.664;VQSLOD=4.5288;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:60.13:0,60,898	0/0:9,0:9:18.04:0,18,246	0/0:30,0:27:30.01:0,30,414	0/0:24,0:21:23.20:0,23,387	1/1:6,0:30:52.01:653,52,0	1/1:8,26:34:33.11:807,33,0	1/1:7,15:22:27.09:660,27,0	0/0:35,0:35:57.17:0,57,850	0/1:7,16:24:13.17:770,0,13	0/0:35,0:35:78.27:0,78,1272	0/0:22,0:22:42.13:0,42,656	1/1:6,16:24:21.07:513,21,0	1/1:7,29:37:45.15:1088,45,0	1/1:5,0:25:36.04:528,36,0	0/0:33,0:33:66.20:0,66,1022	0/0:29,0:29:19.28:0,19,1019	0/0:10,0:10:24.08:0,24,364	0/0:17,0:17:39.13:0,39,622	0/0:20,0:20:36.11:0,36,560	0/0:36,0:36:72.24:0,72,1152	0/0:37,0:37:75.21:0,75,1185	1/1:8,22:31:53.88:936,54,0	1/1:5,22:29:49.10:1120,49,0	1/1:5,19:25:27.09:660,27,0	0/0:14,0:14:39.13:0,39,634	0/0:20,0:20:45.14:0,45,672	0/0:29,0:29:72.25:0,72,1171	0/0:8,0:8:21.03:0,21,284
chr10	41420862	.	TC	T	9980.83	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=17.306;DP=753;FS=0.000;HRun=1;HaplotypeScore=72.4907;InbreedingCoeff=0.9976;MQ=84.02;MQ0=0;MQRankSum=-2.789;QD=38.54;ReadPosRankSum=4.269;VQSLOD=5.3795;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:66.21:0,66,1031	0/0:5,0:5:15.05:0,15,240	0/0:28,0:28:75.74:0,76,1228	0/0:23,0:23:65.99:0,66,957	1/1:0,27:27:75.25:1049,75,0	1/1:0,26:26:63.21:881,63,0	1/1:0,20:20:57.19:797,57,0	0/0:34,0:34:99:0,99,1581	1/1:0,23:23:69.23:965,69,0	0/0:34,0:34:99:0,102,1611	0/0:33,0:33:93.30:0,93,1464	1/1:0,25:25:69.23:963,69,0	1/1:0,31:31:81.27:1133,81,0	1/1:0,28:28:75.25:1048,75,0	0/0:34,0:34:99:0,102,1606	0/0:25,1:26:36.30:0,36,1152	0/0:19,0:19:57.19:0,57,911	0/0:21,0:21:59.36:0,59,957	0/0:28,0:28:84.29:0,84,1343	0/0:34,0:34:99:0,102,1620	0/0:18,0:18:54.17:0,54,840	1/1:0,31:31:93.31:1299,93,0	1/1:0,28:28:78.23:1091,78,0	1/1:0,20:20:54.18:755,54,0	0/0:40,0:40:99:0,120,1919	0/0:30,0:30:90.29:0,90,1395	0/0:48,0:47:99:0,144,2270	0/0:17,0:17:51.15:0,51,783
chr10	41423152	.	GAAAAAAAAGA	G	10694.88	PASS	AC=20;AF=0.370;AN=54;BaseQRankSum=12.363;DP=710;FS=5.245;HRun=0;HaplotypeScore=239.8882;InbreedingCoeff=0.9966;MQ=56.39;MQ0=19;MQRankSum=-12.619;QD=62.54;ReadPosRankSum=2.354;VQSLOD=3.8306;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:69.24:0,69,2933	0/0:13,0:13:36.12:0,36,1689	0/0:97,0:32:31.83:0,32,777	0/0:97,0:25:16.10:0,16,401	1/1:9,14:23:51.17:1330,51,0	1/1:11,11:22:66.23:1719,66,0	1/1:10,8:18:45.15:1126,45,0	0/0:26,0:26:57.14:0,57,1652	1/1:9,9:18:48.15:1128,48,0	0/0:27,0:27:66.20:0,66,2655	0/0:20,0:20:51.01:0,51,2181	1/1:7,6:13:33.03:768,33,0	1/1:8,9:17:39.13:1123,39,0	1/1:7,13:20:54.05:1403,54,0	0/0:18,0:18:48.15:0,48,2075	0/0:17,0:17:36.11:0,36,1516	0/0:31,0:31:81.25:0,81,3374	0/0:30,0:30:60.13:0,60,2042	0/0:15,0:15:33.11:0,33,1324	0/0:23,0:23:54.19:0,54,2329	./.	1/1:9,4:13:30.01:640,30,0	1/1:8,9:18:42.05:1024,42,0	1/1:7,2:8:18.06:433,18,0	0/0:30,0:30:82.52:0,83,3575	0/0:28,0:27:63.21:0,63,2691	0/0:14,0:14:39.13:0,39,1521	0/0:17,0:17:39.13:0,39,1441
chr10	41423161	.	GA	G	1581.19	PASS	AC=20;AF=0.370;AN=54;BaseQRankSum=16.152;DP=684;FS=2.205;HRun=9;HaplotypeScore=164.5308;InbreedingCoeff=0.9881;MQ=55.64;MQ0=17;MQRankSum=-13.445;QD=9.64;ReadPosRankSum=0.043;VQSLOD=0.8829;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:71.70:0,72,798	0/0:12,0:12:36.11:0,36,415	0/0:84,0:27:13.47:0,13,232	0/0:86,0:23:11.77:0,12,138	1/1:17,4:21:43.22:210,43,0	1/1:19,5:24:59.69:310,60,0	1/1:13,3:16:39.69:229,40,0	0/0:30,0:29:60.14:0,60,662	1/1:14,4:18:42.12:228,42,0	0/0:26,0:26:60.13:0,60,673	0/0:22,0:22:59.52:0,60,645	1/1:10,2:12:23.82:127,24,0	1/1:13,3:16:34.93:151,35,0	1/1:16,3:19:38.34:166,38,0	0/0:19,0:19:51.14:0,51,578	0/0:17,0:17:39.11:0,39,445	0/0:34,0:34:87.26:0,87,1001	0/0:28,0:28:66.19:0,66,745	0/0:12,0:13:38.95:0,39,430	0/0:24,0:24:63.19:0,63,724	./.	1/1:8,4:12:23.24:141,23,0	1/1:14,1:16:33.41:168,33,0	1/1:7,3:9:14.52:66,15,0	0/0:32,0:33:87.73:0,88,1004	0/0:29,0:28:75.14:0,75,836	0/0:15,0:15:42.10:0,42,469	0/0:14,0:15:44.94:0,45,485
chr10	41423183	.	GA	G	2480.25	PASS	AC=10;AF=0.185;AN=54;BaseQRankSum=-2.264;DP=652;FS=4.760;HRun=11;HaplotypeScore=152.6508;InbreedingCoeff=0.8920;MQ=58.24;MQ0=9;MQRankSum=6.459;QD=18.51;ReadPosRankSum=1.032;VQSLOD=2.6360;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,1:32:56.50:0,57,778	0/0:15,0:15:23.42:0,23,344	0/0:41,0:17:5.62:0,6,107	0/0:38,0:14:0.90:0,1,31	0/0:26,0:26:52.84:0,53,205	0/0:23,0:23:49.61:0,50,194	0/0:13,0:13:31.36:0,31,123	0/0:31,1:30:47.22:0,47,636	0/0:20,0:20:47.02:0,47,185	1/1:3,21:26:66.98:529,67,0	1/1:4,24:28:68.85:559,69,0	0/0:12,0:12:28.95:0,29,116	0/0:21,0:21:43.24:0,43,164	0/0:25,0:25:60.37:0,60,226	1/1:6,21:27:33.90:480,34,0	0/0:19,2:21:7.83:0,8,480	0/0:36,1:37:80.56:0,81,1029	1/1:2,21:23:53.92:443,54,0	0/0:22,1:24:57.09:0,57,611	0/0:30,0:30:81.17:0,81,843	./.	0/0:15,0:15:36.97:0,37,148	0/0:20,0:19:43.70:0,44,171	0/0:13,0:13:23.76:0,24,94	1/1:6,23:30:79.69:640,80,0	0/0:29,0:29:75.12:0,75,767	0/0:18,0:18:48.10:0,48,500	0/0:10,1:11:8.40:0,8,275
chr10	41423186	.	A	AG	6106.34	PASS	AB=1.000;AC=21;AF=0.389;AN=54;BaseQRankSum=12.280;DP=644;FS=0.716;HRun=0;HaplotypeScore=137.2765;InbreedingCoeff=0.9236;MQ=58.47;MQ0=6;MQRankSum=-10.350;QD=27.63;ReadPosRankSum=3.636;VQSLOD=4.6724;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,105,1265	0/0:15,0:15:45.12:0,45,568	0/0:32,0:13:25.97:0,26,241	0/1:33,0:11:15.81:16,0,47	1/1:0,25:25:64.33:771,64,0	1/1:0,21:21:57.18:711,57,0	1/1:0,13:13:36.11:447,36,0	0/0:32,0:30:83.63:0,84,1003	1/1:0,20:20:54.17:679,54,0	0/0:26,0:26:74.40:0,74,538	0/0:28,0:28:80.42:0,80,590	1/1:0,11:11:33.10:406,33,0	1/1:0,19:19:54.17:665,54,0	1/1:1,24:26:75.16:926,75,0	0/0:28,0:28:80.52:0,81,620	0/0:20,0:20:57.10:0,57,722	0/0:38,0:38:99:0,114,1463	0/0:23,0:23:59.56:0,60,431	0/0:24,0:24:67.61:0,68,901	0/0:31,0:31:90.26:0,90,1189	./.	1/1:1,16:17:42.06:527,42,0	1/1:0,21:20:53.53:637,54,0	1/1:0,15:15:26.99:322,27,0	0/0:29,0:29:83.33:0,83,600	0/0:29,0:29:67.60:0,68,1021	0/0:19,0:19:54.15:0,54,715	0/0:12,0:12:36.06:0,36,445
chr10	41424469	.	T	TG	8172.37	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=17.492;DP=659;FS=0.659;HRun=3;HaplotypeScore=94.8933;InbreedingCoeff=0.9993;MQ=94.35;MQ0=0;MQRankSum=-2.842;QD=38.92;ReadPosRankSum=4.459;VQSLOD=4.4079;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:93.26:0,93,1103	0/0:12,0:12:33.10:0,33,396	0/0:31,0:31:81.21:0,81,940	0/0:28,0:28:62.27:0,62,725	1/1:1,30:31:90.30:1253,90,0	1/1:1,20:21:60.20:840,60,0	1/1:2,14:16:39.13:546,39,0	0/0:27,0:27:69.21:0,69,828	1/1:0,16:16:48.16:672,48,0	0/0:32,0:32:96.26:0,96,1123	0/0:18,0:18:45.14:0,45,540	1/1:3,29:32:81.27:1134,81,0	1/1:0,21:21:63.21:881,63,0	1/1:0,14:14:36.12:504,36,0	0/0:31,0:31:90.28:0,90,1079	0/0:24,0:24:69.20:0,69,816	0/0:14,0:14:39.12:0,39,467	0/0:26,0:26:72.22:0,72,862	0/0:26,0:26:75.17:0,75,853	0/0:30,0:30:90.28:0,90,1077	0/0:24,0:24:63.19:0,63,756	1/1:0,20:20:57.19:797,57,0	1/1:1,22:23:63.21:876,63,0	1/1:0,16:16:48.16:669,48,0	0/0:15,0:15:42.12:0,42,494	0/0:37,0:37:99:0,102,1224	0/0:32,0:32:93.27:0,93,1101	0/0:7,0:7:21.06:0,21,252
chr10	41425172	.	G	GTT	11870.98	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-14.565;DP=730;FS=0.944;HRun=1;HaplotypeScore=80.8041;InbreedingCoeff=0.9996;MQ=80.13;MQ0=0;MQRankSum=-2.659;QD=50.73;ReadPosRankSum=2.842;VQSLOD=4.9001;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,135,2067	0/0:12,0:12:36.12:0,36,551	0/0:20,0:20:60.18:0,60,874	0/0:16,0:16:42.14:0,42,629	1/1:1,32:33:93.23:1721,93,0	1/1:1,12:13:30.10:580,30,0	1/1:1,23:24:54.19:1043,54,0	0/0:30,0:30:87.30:0,87,1331	1/1:3,16:20:48.16:917,48,0	0/0:39,0:39:99:0,111,1676	0/0:25,0:25:75.25:0,75,1147	1/1:1,16:17:51.13:946,51,0	1/1:0,21:21:60.21:1159,60,0	1/1:1,26:28:72.25:1385,72,0	0/0:37,0:37:99:0,111,1655	0/0:29,1:30:29.29:0,29,1185	0/0:48,0:48:99:0,144,2203	0/0:29,0:29:84.28:0,84,1282	0/0:31,0:31:93.31:0,93,1404	0/0:28,0:28:84.29:0,84,1286	0/0:35,0:35:99:0,105,1562	1/1:3,29:33:87.13:1511,87,0	1/1:0,23:23:69.24:1333,69,0	1/1:0,22:22:66.23:1275,66,0	0/0:13,0:13:36.10:0,36,528	0/0:23,0:23:66.21:0,66,990	0/0:24,0:24:69.23:0,69,1055	0/0:9,0:9:27.09:0,27,413
chr10	41426438	.	G	GC	2068.41	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=3.027;DP=622;FS=6.471;HRun=6;HaplotypeScore=75.5762;InbreedingCoeff=0.9625;MQ=79.17;MQ0=0;MQRankSum=-1.827;QD=18.47;ReadPosRankSum=0.187;VQSLOD=3.1097;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,126,1283	0/0:12,0:12:33.07:0,33,336	0/0:19,0:18:8.95:0,9,346	0/0:21,0:18:35.65:0,36,305	1/1:3,0:21:40.65:205,41,0	0/0:22,0:22:66.11:0,66,658	0/0:24,0:24:63.10:0,63,626	0/0:19,0:19:42.08:0,42,419	0/0:29,0:29:78.17:0,78,795	0/0:21,0:21:60.14:0,60,611	0/0:15,0:15:39.09:0,39,397	1/1:2,21:23:48.11:586,48,0	0/0:31,0:31:78.17:0,78,795	1/1:3,0:25:41.42:207,41,0	0/0:22,0:22:66.15:0,66,673	0/0:20,0:20:57.12:0,57,577	0/0:21,0:21:60.13:0,60,612	0/0:20,0:20:57.09:0,57,570	0/0:13,0:13:30.06:0,30,306	0/0:23,0:23:66.15:0,66,673	0/0:31,0:31:81.18:0,81,825	0/0:26,0:26:69.15:0,69,703	1/1:1,17:18:48.15:604,48,0	1/1:4,21:25:51.16:641,51,0	0/0:22,0:22:66.15:0,66,673	0/0:25,0:25:66.14:0,66,673	0/0:23,0:22:66.14:0,66,667	0/0:3,0:3:6.01:0,6,61
chr10	41426970	.	CTGT	C	2921.37	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=14.985;DP=624;FS=1.346;HRun=0;HaplotypeScore=155.6835;InbreedingCoeff=0.9990;MQ=75.90;MQ0=0;MQRankSum=-14.079;QD=30.12;ReadPosRankSum=3.641;VQSLOD=4.1350;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,135,3326	0/0:14,0:14:42.14:0,42,1008	0/0:18,0:18:54.15:0,54,1125	0/0:16,0:15:33.11:0,33,738	0/0:22,0:22:66.23:0,66,1615	1/1:1,15:16:48.12:538,48,0	1/1:0,15:15:39.11:453,39,0	0/0:34,0:34:99:0,99,2448	1/1:1,22:23:69.19:796,69,0	0/0:23,0:23:69.23:0,69,1664	0/0:16,0:16:44.72:0,45,1107	0/0:23,0:23:69.24:0,69,1699	1/1:2,20:25:66.14:754,66,0	0/0:26,0:26:78.25:0,78,1849	0/0:26,0:26:78.27:0,78,1849	0/0:30,0:30:65.38:0,65,2119	0/0:27,0:27:81.26:0,81,1920	0/0:17,0:17:51.16:0,51,1206	0/0:18,0:18:51.18:0,51,1258	0/0:23,0:23:69.24:0,69,1699	0/0:23,0:23:69.24:0,69,1699	1/1:0,18:18:48.14:556,48,0	0/0:16,0:16:45.14:0,45,1031	0/0:29,0:29:87.30:0,87,2129	0/0:27,0:27:78.27:0,78,1896	0/0:20,0:20:57.20:0,57,1406	0/0:26,0:26:78.27:0,78,1922	0/0:7,0:7:21.07:0,21,513
chr10	41426974	.	CAAAGGGTCA	C	6631.99	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=15.360;DP=618;FS=1.378;HRun=0;HaplotypeScore=220.4245;InbreedingCoeff=0.9990;MQ=74.98;MQ0=0;MQRankSum=-15.135;QD=70.55;ReadPosRankSum=3.507;VQSLOD=4.9550;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,138,6841	0/0:13,0:13:39.13:0,39,1803	0/0:14,0:14:39.75:0,40,1321	0/0:16,0:15:39.12:0,39,1524	0/0:24,0:24:72.23:0,72,3450	1/1:0,15:15:45.15:1140,45,0	1/1:0,15:15:40.91:1000,41,0	0/0:35,0:35:99:0,102,4494	1/1:0,22:22:66.23:1691,66,0	0/0:23,0:23:69.23:0,69,3267	0/0:16,0:16:45.14:0,45,2148	0/0:23,0:23:69.24:0,69,3434	1/1:4,20:24:65.87:1573,66,0	0/0:25,0:25:75.26:0,75,3778	0/0:23,0:23:69.24:0,69,3278	0/0:33,0:33:99:0,99,4888	0/0:28,0:28:84.29:0,84,4070	0/0:16,0:16:48.14:0,48,2192	0/0:19,0:19:54.16:0,54,2594	0/0:23,0:23:69.24:0,69,3393	0/0:24,0:24:72.25:0,72,3550	1/1:0,18:18:49.05:1227,49,0	0/0:15,0:15:45.15:0,45,2206	0/0:28,0:28:84.29:0,84,4254	0/0:25,0:25:75.24:0,75,3572	0/0:21,0:21:63.22:0,63,3175	0/0:27,0:27:81.26:0,81,3779	0/0:7,0:7:21.07:0,21,1064
chr10	41426988	.	ACCC	A	5210.42	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=16.092;DP=636;FS=0.380;HRun=4;HaplotypeScore=157.0333;InbreedingCoeff=0.8596;MQ=74.71;MQ0=0;MQRankSum=-15.436;QD=41.03;ReadPosRankSum=1.166;VQSLOD=3.2444;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,126,2967	0/0:11,0:11:33.11:0,33,780	0/0:15,0:15:4.65:0,5,518	0/1:16,0:15:32.35:32,0,608	0/0:23,0:23:69.22:0,69,1563	1/1:1,15:16:48.06:799,48,0	1/1:0,23:23:55.51:1011,56,0	0/0:33,0:33:90.31:0,90,2137	1/1:5,22:27:80.22:1267,80,0	0/0:23,0:23:69.24:0,69,1633	0/0:13,0:13:32.57:0,33,778	0/0:28,0:28:84.27:0,84,1940	1/1:3,23:26:73.39:1171,73,0	0/0:27,0:27:81.28:0,81,1895	0/0:21,0:21:60.21:0,60,1419	0/0:35,0:35:99:0,105,2439	0/0:27,0:27:78.27:0,78,1825	0/0:14,0:13:42.13:0,42,947	0/0:20,0:20:54.19:0,54,1270	0/0:22,0:22:66.23:0,66,1560	0/0:25,0:25:75.26:0,75,1773	1/1:1,18:19:56.95:929,57,0	0/0:14,0:14:42.14:0,42,995	0/0:34,0:34:96.33:0,96,2271	0/0:23,0:23:66.23:0,66,1562	0/0:21,0:21:60.21:0,60,1421	0/0:30,0:29:90.31:0,90,2127	0/0:7,0:7:21.07:0,21,497
chr10	41426991	.	C	CCTTAGA	3127.07	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=14.901;DP=654;FS=0.792;HRun=0;HaplotypeScore=207.5861;InbreedingCoeff=0.9510;MQ=74.76;MQ0=0;MQRankSum=-15.744;QD=24.62;ReadPosRankSum=0.661;VQSLOD=3.4284;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,126,2835	0/0:11,0:11:30.10:0,30,682	0/0:14,0:14:1.66:0,2,467	0/0:18,0:17:33.85:0,34,734	0/0:21,0:21:57.18:0,57,1301	1/1:16,1:18:47.07:348,47,0	1/1:25,0:25:60.90:710,61,0	0/0:33,0:33:84.24:0,84,1863	1/1:22,6:31:77.47:867,77,0	0/0:24,0:24:69.23:0,69,1581	0/0:12,0:12:32.67:0,33,780	0/0:29,0:29:72.25:0,72,1690	1/1:23,3:28:74.37:899,74,0	0/0:27,0:27:81.25:0,81,1778	0/0:22,0:22:54.19:0,54,1273	0/0:34,0:34:99:0,102,2379	0/0:27,0:27:78.23:0,78,1747	0/0:13,0:12:33.11:0,33,775	0/0:20,0:20:51.18:0,51,1190	0/0:22,0:22:63.20:0,63,1441	0/0:26,0:26:72.24:0,72,1651	1/1:19,1:25:54.13:478,54,0	0/0:14,0:14:42.13:0,42,942	0/0:33,0:33:93.32:0,93,2163	0/0:22,0:22:66.23:0,66,1556	0/0:21,0:21:57.20:0,57,1345	0/0:31,0:30:84.29:0,84,1981	0/0:7,0:7:21.07:0,21,497
chr10	41427941	.	AT	A	5090.15	PASS	AB=0.856;AC=38;AF=0.679;AN=56;BaseQRankSum=-7.815;DP=614;FS=0.000;HRun=13;HaplotypeScore=83.4495;InbreedingCoeff=0.6531;MQ=81.42;MQ0=3;MQRankSum=-0.328;QD=10.58;ReadPosRankSum=2.555;VQSLOD=4.5426;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,24:30:6.51:363,7,0	0/1:6,1:7:0.82:1,0,148	0/1:48,0:26:28.42:28,0,84	0/1:47,0:30:7.05:7,0,69	0/0:2,0:14:31.88:0,32,168	0/0:7,0:28:62.82:0,63,344	0/0:4,0:15:34.24:0,34,181	1/1:12,16:28:21.31:318,21,0	0/0:7,0:16:20.36:0,20,135	1/1:5,17:23:52.73:378,53,0	1/1:13,11:24:6.55:209,7,0	1/1:5,8:13:26.40:182,26,0	0/0:7,0:19:40.13:0,40,221	0/0:8,0:23:37.35:0,37,214	1/1:2,14:16:26.84:197,27,0	1/1:3,13:16:29.47:208,29,0	1/1:4,23:28:52.73:378,53,0	1/1:3,20:24:0.37:320,0,0	1/1:6,15:23:10.23:293,10,0	1/1:6,20:27:35.48:414,35,0	1/1:0,7:7:17.90:131,18,0	0/0:4,0:18:39.97:0,40,215	1/1:3,14:17:14.42:238,14,0	1/1:2,13:15:35.18:248,35,0	0/1:4,23:28:29.51:345,0,30	1/1:6,19:25:27.48:365,27,0	1/1:4,21:25:50.69:372,51,0	1/1:1,7:9:13.96:93,14,0
chr10	41428293	.	A	AAT	652.19	PASS	AB=0.532;AC=4;AF=0.071;AN=56;BaseQRankSum=6.942;DP=607;FS=6.534;HRun=0;HaplotypeScore=90.8868;InbreedingCoeff=0.5034;MQ=78.87;MQ0=1;MQRankSum=1.650;QD=9.19;ReadPosRankSum=1.573;VQSLOD=2.3320;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:72.08:0,72,974	0/0:7,0:8:23.09:0,23,311	0/0:17,0:18:46.95:0,47,579	0/0:18,0:19:53.13:0,53,620	0/0:6,0:38:54.26:0,54,281	0/0:28,0:28:84.19:0,84,1208	0/0:12,0:13:33.08:0,33,506	0/0:33,0:33:93.25:0,93,1379	0/1:3,0:22:18.09:247,0,18	0/0:23,0:23:66.15:0,66,964	0/0:25,0:25:75.14:0,75,1109	0/0:21,0:21:60.19:0,60,916	1/1:2,1:20:7.56:217,8,0	0/0:3,0:19:39.02:0,39,140	0/0:21,0:21:60.18:0,60,934	0/0:22,0:22:66.18:0,66,962	0/0:17,0:18:50.30:0,50,672	0/0:20,0:20:60.17:0,60,892	0/0:10,0:10:30.10:0,30,446	0/0:27,0:28:81.24:0,81,1236	0/0:10,0:10:30.08:0,30,450	0/1:3,0:28:4.86:295,0,5	0/0:25,0:26:77.44:0,77,1145	0/0:16,0:17:48.16:0,48,756	0/0:20,0:21:59.38:0,59,887	0/0:19,0:19:54.15:0,54,825	0/0:28,0:28:80.39:0,80,1126	0/0:22,0:22:66.17:0,66,986
chr10	41429351	.	T	TACAC	5194.90	PASS	AB=0.909;AC=30;AF=0.536;AN=56;BaseQRankSum=-2.359;DP=1208;FS=3.144;HRun=0;HaplotypeScore=453.8863;InbreedingCoeff=0.1091;MQ=41.55;MQ0=37;MQRankSum=-2.259;QD=5.84;ReadPosRankSum=-0.765;VQSLOD=1.8709;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:42,1:49:57.99:156,0,58	0/0:29,0:28:8.75:0,9,231	1/1:63,0:10:1.25:3,1,0	0/0:83,0:24:11.93:0,12,158	0/1:39,0:39:89.40:103,0,89	0/0:19,0:28:15.89:0,16,183	0/1:29,0:43:22.95:23,0,122	0/1:46,2:38:0.52:338,0,1	0/1:21,0:35:0.86:1,0,273	1/1:62,7:59:17.33:744,17,0	0/1:29,6:33:16.61:202,0,17	0/0:44,0:44:43.01:0,43,714	0/1:23,0:38:4.19:4,0,312	0/1:28,0:39:99:170,0,135	1/1:30,9:34:2.51:386,3,0	0/1:25,1:28:21.35:201,0,21	0/0:35,0:38:46.41:0,46,844	1/1:15,2:16:8.45:247,8,0	1/1:13,0:11:4.80:225,5,0	0/1:27,5:26:55.39:272,0,55	0/1:95,14:93:36.89:206,0,37	0/0:37,0:47:19.46:0,19,277	0/1:52,0:44:58.35:58,0,223	0/0:40,0:40:26.18:0,26,402	1/1:32,7:35:5.87:505,6,0	1/1:32,8:37:50.10:718,50,0	1/1:17,5:22:10.53:465,11,0	1/1:13,0:15:9.07:167,9,0
chr10	41429391	.	CAT	C	11914.04	PASS	AB=0.764;AC=27;AF=0.482;AN=56;BaseQRankSum=6.973;DP=2701;DS;FS=109.601;HRun=0;HaplotypeScore=932.9777;InbreedingCoeff=-0.9413;MQ=31.47;MQ0=114;MQRankSum=-7.880;QD=4.53;ReadPosRankSum=0.493;VQSLOD=-0.1971;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:86,50:128:99:797,0,107	0/1:29,5:26:95.14:95,0,138	0/0:50,2:15:7.26:0,7,203	0/1:47,1:13:39.18:39,0,108	0/1:63,14:75:99:207,0,110	0/1:39,26:68:99:620,0,190	0/1:71,20:99:99:545,0,450	0/1:130,20:116:99:747,0,717	0/1:60,13:78:99:235,0,578	0/1:104,35:130:99:1383,0,570	0/1:36,17:51:89.61:196,0,90	0/1:64,19:91:99:262,0,606	0/1:74,14:90:99:293,0,821	0/1:72,21:95:99:430,0,462	0/1:77,28:96:99:364,0,499	0/1:51,20:72:99:840,0,170	0/1:66,7:82:99:331,0,481	0/1:46,10:55:99:328,0,477	0/1:48,18:53:99:574,0,168	0/1:37,8:40:46.42:198,0,46	0/1:148,68:206:99:921,0,199	0/1:78,31:105:99:476,0,312	0/1:61,10:67:82.11:82,0,176	0/1:67,10:83:23.54:24,0,269	0/1:53,21:73:99:307,0,184	0/1:72,35:96:99:1145,0,273	0/1:33,13:48:99:422,0,285	0/1:13,1:12:48.23:51,0,48
chr10	41429565	.	TAC	T	2806.79	PASS	AB=0.932;AC=26;AF=0.500;AN=52;BaseQRankSum=-4.313;DP=2117;DS;FS=26.906;HRun=0;HaplotypeScore=515.8963;InbreedingCoeff=-0.1000;MQ=36.29;MQ0=75;MQRankSum=1.785;QD=1.90;ReadPosRankSum=1.611;VQSLOD=0.0028;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:87,6:82:30.03:305,30,0	0/1:47,0:44:22.56:23,0,24	./.	./.	1/1:52,0:54:8.52:42,9,0	1/1:42,1:48:24.15:133,24,0	0/1:92,0:97:29.38:116,0,29	0/1:133,1:99:53.79:69,0,54	0/1:74,0:73:2.21:2,0,314	1/1:94,3:85:17.87:180,18,0	1/1:34,0:31:2.84:15,3,0	0/0:75,0:73:20.99:0,21,232	0/0:55,0:51:14.86:0,15,192	0/1:40,0:48:8.01:125,0,8	0/1:75,12:86:31.79:470,0,32	0/1:68,6:71:36.25:273,0,36	0/0:72,0:66:33.54:0,34,666	0/1:62,6:60:19.83:305,0,20	1/1:87,0:60:4.66:40,5,0	0/1:63,2:54:13.08:80,0,13	0/1:158,7:139:70.29:266,0,70	0/0:70,0:65:14.52:0,15,113	0/0:58,0:55:4.93:0,5,32	0/0:76,0:69:15.90:0,16,107	0/1:60,3:61:28.25:133,0,28	0/1:68,1:61:39.94:93,0,40	0/1:21,3:25:6.10:164,0,6	0/1:22,3:24:49.68:141,0,50
chr10	41430109	.	AG	A	2246.66	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.183;DP=635;FS=1.696;HRun=1;HaplotypeScore=62.0158;InbreedingCoeff=0.9998;MQ=82.86;MQ0=0;MQRankSum=-1.417;QD=38.08;ReadPosRankSum=3.641;VQSLOD=4.2854;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,141,2179	0/0:13,0:13:36.11:0,36,552	0/0:16,1:17:33.48:0,33,665	0/0:19,0:19:57.16:0,57,854	0/0:18,0:18:54.16:0,54,808	0/0:24,0:24:72.23:0,72,1126	0/0:18,0:18:54.18:0,54,860	0/0:34,0:34:99:0,99,1556	1/1:0,15:15:42.14:587,42,0	0/0:25,0:25:75.26:0,75,1197	0/0:13,0:13:39.11:0,39,595	0/0:23,0:23:69.22:0,69,1080	1/1:0,28:28:81.27:1132,81,0	0/0:29,0:29:87.25:0,87,1337	0/0:19,0:19:54.17:0,54,839	0/0:19,0:19:57.19:0,57,911	0/0:37,0:37:99:0,111,1726	0/0:16,0:16:48.14:0,48,740	0/0:28,0:28:84.27:0,84,1297	0/0:24,0:24:72.24:0,72,1137	0/0:23,0:23:69.24:0,69,1102	1/1:0,16:16:48.16:671,48,0	0/0:29,0:29:87.28:0,87,1362	0/0:15,0:15:45.15:0,45,717	0/0:21,0:21:63.20:0,63,985	0/0:22,0:22:66.22:0,66,1034	0/0:30,0:30:90.14:0,90,1304	0/0:12,0:12:36.05:0,36,498
chr10	41430381	.	TA	T	5647.14	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=14.311;DP=560;FS=2.896;HRun=5;HaplotypeScore=55.9476;InbreedingCoeff=0.9976;MQ=79.79;MQ0=0;MQRankSum=-0.766;QD=29.26;ReadPosRankSum=1.637;VQSLOD=5.3798;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:36.12:0,36,492	0/0:9,0:9:27.09:0,27,369	0/0:18,0:18:34.82:0,35,574	0/0:10,0:10:15.66:0,16,245	1/1:5,24:29:66.18:747,66,0	1/1:2,25:27:69.20:783,69,0	1/1:4,18:22:51.14:579,51,0	0/0:18,0:18:48.16:0,48,657	1/1:2,15:17:45.13:510,45,0	0/0:22,0:22:60.17:0,60,790	0/0:18,0:18:51.14:0,51,665	1/1:0,16:16:39.11:442,39,0	1/1:1,14:15:42.12:476,42,0	1/1:0,11:11:33.09:374,33,0	0/0:23,0:23:69.22:0,69,930	0/0:21,0:21:63.18:0,63,829	0/0:22,0:22:60.16:0,60,798	0/0:23,0:23:60.20:0,60,820	0/0:25,0:25:66.22:0,66,901	0/0:28,0:28:75.24:0,75,1012	0/0:12,0:12:30.08:0,30,393	1/1:1,22:23:63.18:714,63,0	1/1:0,18:18:48.14:544,48,0	1/1:0,15:15:42.12:476,42,0	0/0:27,0:27:78.26:0,78,1064	0/0:27,0:27:75.24:0,75,998	0/0:28,0:28:84.28:0,84,1147	0/0:23,1:24:38.24:0,38,910
chr10	41431709	.	TGGCAGCAGGATGCTGTG	T	1640.14	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.213;DP=613;FS=5.612;HRun=0;HaplotypeScore=271.5271;InbreedingCoeff=0.8893;MQ=81.48;MQ0=0;MQRankSum=-5.456;QD=65.61;ReadPosRankSum=2.340;VQSLOD=2.8909;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,99,7222	0/0:4,0:4:12.04:0,12,676	0/0:20,0:20:15.97:0,16,2743	0/0:21,0:21:46.65:0,47,2193	1/1:2,4:6:6.02:183,6,0	0/0:27,0:27:63.20:0,63,4542	0/0:29,0:29:66.23:0,66,4778	0/0:22,0:22:51.17:0,51,2968	0/0:19,0:19:48.14:0,48,3167	0/0:18,0:18:45.15:0,45,3438	0/0:10,0:10:18.06:0,18,1275	0/0:17,0:17:42.14:0,42,3215	0/0:22,0:22:42.14:0,42,2882	1/1:6,13:19:33.11:1569,33,0	0/0:30,0:30:84.29:0,84,6437	0/0:19,0:19:54.19:0,54,4069	0/0:35,0:35:93.32:0,93,6612	0/0:33,0:33:90.31:0,90,6543	0/0:16,0:16:45.15:0,45,2985	0/0:23,0:23:57.20:0,57,4443	0/0:44,0:44:96.33:0,96,6708	0/0:17,0:17:30.57:0,31,2169	0/0:14,0:14:33.11:0,33,2314	0/0:22,0:21:57.20:0,57,4245	0/0:27,0:27:57.20:0,57,4197	0/0:25,0:25:54.19:0,54,3666	0/0:27,0:27:78.27:0,78,5467	0/0:3,0:3:9.03:0,9,601
chr10	41435310	.	TATACACAC	T	84.37	PASS	AB=0.500;AC=3;AF=0.054;AN=56;BaseQRankSum=2.794;DP=397;FS=0.000;HRun=0;HaplotypeScore=93.8010;InbreedingCoeff=0.7292;MQ=65.75;MQ0=1;MQRankSum=-2.948;QD=3.67;ReadPosRankSum=-1.871;VQSLOD=1.5898;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:42.14:0,42,1684	0/0:3,0:3:9.03:0,9,386	0/0:17,0:7:12.04:0,12,249	0/0:15,0:6:11.99:0,12,177	0/0:23,0:23:69.24:0,69,2735	1/1:4,11:15:9.03:167,9,0	0/1:0,8:8:0:0,0,0	0/0:38,0:38:87.30:0,87,3140	0/0:7,0:7:21.07:0,21,900	0/0:17,0:17:48.16:0,48,2007	0/0:19,0:19:57.20:0,57,2282	0/0:13,0:13:36.12:0,36,1448	0/0:13,0:13:39.13:0,39,1453	0/0:9,0:9:27.09:0,27,1141	0/0:3,0:3:9.03:0,9,385	0/0:11,0:11:30.10:0,30,1118	0/0:21,0:21:54.16:0,54,2058	0/0:13,0:13:33.11:0,33,1346	0/0:14,0:14:27.09:0,27,923	0/0:16,0:16:48.16:0,48,1925	0/0:9,0:9:24.08:0,24,1028	0/0:7,0:7:21.07:0,21,738	0/0:7,0:7:21.07:0,21,899	0/0:6,0:6:18.06:0,18,726	0/0:22,0:22:66.23:0,66,2509	0/0:25,0:25:69.24:0,69,2856	0/0:17,0:17:48.16:0,48,1951	0/0:15,0:15:42.14:0,42,1309
chr10	41435916	.	C	CAT	6126.49	PASS	AB=0.875;AC=30;AF=0.536;AN=56;BaseQRankSum=-3.887;DP=1602;FS=12.945;HRun=0;HaplotypeScore=681.6800;InbreedingCoeff=-0.5863;MQ=34.60;MQ0=50;MQRankSum=2.556;QD=4.22;ReadPosRankSum=2.102;VQSLOD=-0.5438;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:48,4:52:41.23:126,0,41	0/1:29,3:32:58.50:99,0,59	0/0:71,0:6:11.91:0,12,126	0/0:74,0:10:14.08:0,14,184	0/1:55,7:61:49.52:99,0,50	0/1:31,8:39:7.18:157,0,7	0/1:37,8:44:3.98:43,0,4	1/1:57,7:50:47.70:624,48,0	1/1:53,10:60:0.11:189,0,0	0/1:73,43:112:99:1103,0,268	1/1:43,2:44:7.41:235,7,0	0/1:53,18:67:39.16:119,0,39	0/1:59,17:70:51:364,0,51	0/1:58,11:69:16.41:44,0,16	0/1:55,14:69:18.75:159,0,19	1/1:42,12:56:37.74:366,38,0	0/1:18,1:18:32.09:56,0,32	0/1:26,0:26:61.78:155,0,62	0/1:29,5:24:38.01:254,0,38	0/1:47,10:59:14.34:164,0,14	0/1:84,6:79:99:173,0,147	0/1:72,8:76:38.89:39,0,53	0/1:58,9:63:49.08:183,0,49	0/1:27,3:29:11.03:55,0,11	0/1:34,6:40:57.96:74,0,58	0/1:61,15:72:99:985,0,155	0/1:35,4:38:55.95:177,0,56	0/1:16,1:17:11.06:86,0,11
chr10	41435988	.	C	CA	2425.72	PASS	AB=0.890;AC=13;AF=0.232;AN=56;BaseQRankSum=16.450;DP=1606;FS=146.103;HRun=1;HaplotypeScore=538.3921;InbreedingCoeff=-0.3033;MQ=39.19;MQ0=39;MQRankSum=-14.662;QD=3.20;ReadPosRankSum=-0.162;VQSLOD=-0.1827;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:65,3:67:99:0,135,1796	0/0:32,3:37:29.21:0,29,565	0/0:62,0:16:42.13:0,42,559	0/0:44,0:16:41.21:0,41,516	0/0:46,11:64:44.17:0,44,626	0/0:37,0:37:15.19:0,15,475	0/0:42,0:39:49.40:0,49,894	0/1:73,5:66:99:123,0,1622	0/1:50,0:47:59.35:59,0,415	0/1:87,13:95:99:756,0,1422	0/0:36,12:49:35.05:0,35,455	0/1:46,15:58:99:273,0,338	0/1:39,0:36:99:167,0,277	0/1:46,10:56:21.02:21,0,210	0/0:56,16:67:47.02:0,47,564	0/1:48,11:61:95.88:96,0,687	0/1:25,1:24:20.43:20,0,681	0/0:21,0:19:20.47:0,20,671	0/1:39,4:36:99:103,0,872	0/0:43,11:55:65.26:0,65,961	0/0:145,1:140:99:0,188,3084	0/1:71,1:68:9.72:10,0,229	0/0:48,12:59:10.99:0,11,411	0/0:19,0:15:14.76:0,15,206	0/0:47,12:61:33.09:0,33,875	0/1:87,15:93:99:514,0,2178	0/1:27,12:37:99:315,0,483	0/1:19,5:24:99:121,0,553
chr10	41435999	.	TAC	T	3715.18	PASS	AB=0.871;AC=16;AF=0.286;AN=56;BaseQRankSum=8.960;DP=1664;FS=8.102;HRun=0;HaplotypeScore=565.7191;InbreedingCoeff=0.6513;MQ=38.91;MQ0=66;MQRankSum=-2.388;QD=7.10;ReadPosRankSum=-0.935;VQSLOD=1.1169;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:71,0:69:99:0,149,2436	0/0:32,0:32:44.47:0,44,677	0/0:52,1:13:14.87:0,15,155	0/0:45,1:13:12.04:0,12,149	1/1:48,18:61:35.87:444,36,0	0/0:43,0:43:59.45:0,59,839	0/0:47,0:41:81.66:0,82,1270	0/0:83,0:62:99:0,112,1499	1/1:33,16:46:15.43:510,15,0	0/0:101,5:96:14.14:0,14,1660	0/1:52,6:56:10.16:10,0,511	0/1:51,14:61:99:399,0,126	0/1:47,3:46:34.46:314,0,34	1/1:23,32:55:22.35:327,22,0	0/0:74,0:68:46.93:0,47,624	0/0:61,1:60:80.04:0,80,1210	1/1:14,16:28:59.14:783,59,0	0/0:23,0:20:51.62:0,52,795	0/0:44,0:34:67.32:0,67,991	0/0:59,1:60:92.60:0,93,1438	0/0:158,0:149:99:0,245,4040	0/1:53,16:64:10.10:186,0,10	1/1:40,23:61:32.07:512,32,0	1/1:13,5:13:19.20:232,19,0	0/0:63,1:63:80.99:0,81,1187	0/0:110,1:97:99:0,109,2423	0/0:40,0:38:49.96:0,50,760	0/0:24,0:24:28.82:0,29,610
chr10	41436024	.	TAC	T	2154.17	PASS	AB=0.773;AC=8;AF=0.143;AN=56;BaseQRankSum=8.093;DP=1614;FS=33.373;HRun=0;HaplotypeScore=544.5428;InbreedingCoeff=0.4456;MQ=40.40;MQ0=88;MQRankSum=-1.860;QD=6.69;ReadPosRankSum=-1.383;VQSLOD=0.9513;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:77,0:74:99:0,163,2616	0/0:25,0:25:50.32:0,50,779	0/0:55,0:15:41.83:0,42,526	0/0:65,0:12:36.10:0,36,511	0/0:62,0:60:42.10:0,42,658	0/0:39,0:40:56.50:0,57,1052	0/0:44,0:39:87.37:0,87,1305	0/0:62,0:39:69.56:0,70,1010	1/1:31,10:37:7.41:444,7,0	0/0:95,0:87:99:0,162,2332	0/0:60,0:58:57:0,57,817	0/1:46,13:54:95.19:357,0,95	0/1:22,29:48:23.17:491,0,23	0/0:49,0:49:48.51:0,49,660	0/0:65,0:63:64.43:0,64,918	0/0:60,1:60:99:0,109,1495	0/0:32,0:31:70.10:0,70,1082	0/0:21,0:19:45.09:0,45,679	0/0:41,0:30:57.15:0,57,875	0/0:65,0:64:88.66:0,89,1271	0/0:155,0:147:99:0,280,4536	0/1:59,11:63:36.58:304,0,37	0/1:39,18:54:2.14:367,0,2	1/1:33,6:29:10.17:330,10,0	0/0:56,0:56:72.16:0,72,963	0/0:93,0:78:99:0,115,2134	0/0:35,0:34:59.49:0,59,720	0/0:23,0:23:36.88:0,37,646
chr10	41436148	.	T	TACACAC	7913.47	PASS	AB=0.708;AC=47;AF=0.904;AN=52;BaseQRankSum=-4.088;DP=930;FS=5.832;HRun=0;HaplotypeScore=234.9100;InbreedingCoeff=0.3840;MQ=44.47;MQ0=23;MQRankSum=-0.331;QD=9.98;ReadPosRankSum=1.245;VQSLOD=3.4425;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:22,1:44:2.94:39,3,0	0/0:12,0:13:12.04:0,12,224	./.	./.	1/1:21,0:21:12.04:224,12,0	1/1:16,0:16:12.49:153,12,0	1/1:27,0:24:12.04:171,12,0	1/1:42,0:39:24.91:369,25,0	0/1:27,6:44:39.64:414,0,40	1/1:27,1:27:30.95:536,31,0	1/1:25,7:31:3.01:54,3,0	1/1:9,1:31:42.13:549,42,0	1/1:26,3:31:13.95:297,14,0	1/1:20,5:27:21.51:360,22,0	1/1:20,17:42:11.42:191,11,0	1/1:13,14:30:23.64:678,24,0	1/1:15,0:32:6.89:116,7,0	1/1:9,1:19:9.03:174,9,0	1/1:23,2:25:20.18:391,20,0	1/1:35,0:35:18.03:355,18,0	1/1:63,0:57:24.17:662,24,0	1/1:29,1:29:14.95:318,15,0	1/1:33,0:39:15.41:279,15,0	1/1:16,0:43:46.53:613,47,0	0/0:16,6:24:0.47:0,0,1	1/1:29,2:31:35.73:608,36,0	1/1:14,0:15:18.02:327,18,0	1/1:15,1:23:1.17:36,1,0
chr10	41437194	.	AC	A	1509.71	PASS	AB=0.895;AC=29;AF=0.518;AN=56;BaseQRankSum=1.787;DP=409;FS=33.625;HRun=13;HaplotypeScore=56.8392;InbreedingCoeff=0.0991;MQ=80.98;MQ0=1;MQRankSum=0.393;QD=4.43;ReadPosRankSum=5.609;VQSLOD=-0.2019;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:15,27:42:64.45:552,64,0	0/0:6,0:6:2.90:0,3,16	0/1:30,0:22:16.90:17,0,84	0/1:16,1:14:0.26:0,0,15	0/0:6,1:7:2.98:0,3,22	1/1:12,0:14:9.19:31,9,0	1/1:10,1:29:38.90:115,39,0	0/0:11,0:11:0.47:0,0,1	0/1:12,1:13:12.89:13,0,45	1/1:9,0:9:2.77:19,3,0	0/0:6,1:7:0.89:0,1,2	0/1:10,5:15:3.01:49,0,3	0/0:13,1:14:1.97:0,2,135	0/0:8,2:10:6.01:0,6,58	0/1:17,3:20:3.60:97,0,4	1/1:1,18:19:41.71:306,42,0	1/1:12,11:24:22.03:158,22,0	0/1:11,2:17:25.92:86,0,26	0/1:16,0:17:3.56:22,0,4	0/0:6,0:6:0:0,0,0	0/1:20,1:21:12.13:12,0,21	0/1:7,0:7:0.15:0,0,0	0/1:8,1:9:12.67:16,0,13	1/1:9,1:12:12.95:78,13,0	1/1:4,1:5:2.93:20,3,0	0/1:7,1:9:17.03:33,0,17	1/1:8,4:12:5.73:33,6,0	0/0:7,0:7:3.99:0,4,15
chr10	41437206	.	CCG	C	172.65	PASS	AB=0.992;AC=6;AF=0.107;AN=56;BaseQRankSum=4.715;DP=456;FS=31.903;HRun=0;HaplotypeScore=71.4928;InbreedingCoeff=0.1738;MQ=72.33;MQ0=1;MQRankSum=-1.039;QD=2.11;ReadPosRankSum=4.950;VQSLOD=-0.7574;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:80.57:0,81,474	0/0:10,0:10:17.73:0,18,127	0/0:27,0:19:6.03:0,6,300	0/1:19,0:14:10.03:10,0,91	0/0:11,0:11:13.07:0,13,112	0/0:10,0:10:3.96:0,4,85	0/1:29,1:30:62.08:229,0,62	0/0:8,0:8:12.34:0,12,81	0/0:13,0:13:29.86:0,30,255	0/0:10,0:10:20.79:0,21,162	0/0:11,0:11:23.94:0,24,206	0/0:19,0:19:34.67:0,35,271	0/0:20,0:20:52.77:0,53,442	0/0:16,0:16:32.69:0,33,277	0/0:21,0:21:40.56:0,41,284	0/0:35,0:35:89.97:0,90,565	0/0:25,0:25:49.29:0,49,368	0/1:19,0:19:3.71:4,0,183	0/0:10,0:10:13.86:0,14,159	0/0:11,0:11:23.63:0,24,178	0/0:21,3:24:19.16:0,19,342	0/0:10,0:11:20.74:0,21,165	0/0:11,0:11:17.87:0,18,156	0/1:11,0:11:8.37:8,0,114	0/0:10,0:10:19.20:0,19,147	0/0:12,0:12:23.76:0,24,199	0/0:16,0:16:26.27:0,26,180	1/1:3,0:3:5.63:32,6,0
chr10	41440211	.	CCT	C	1640.55	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.644;DP=673;FS=0.000;HRun=0;HaplotypeScore=80.3495;InbreedingCoeff=0.9957;MQ=71.35;MQ0=0;MQRankSum=-3.955;QD=40.01;ReadPosRankSum=1.576;VQSLOD=5.4339;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,123,2401	0/0:14,0:14:42.14:0,42,853	0/0:18,0:18:51.17:0,51,980	0/0:13,0:13:35.87:0,36,584	0/0:45,0:45:99:0,132,2643	1/1:0,22:22:60.20:979,60,0	1/1:0,19:19:48.16:783,48,0	0/0:33,0:33:99:0,99,1947	0/0:24,0:24:72.25:0,72,1463	0/0:32,0:32:96.33:0,96,1936	0/0:27,0:27:81.27:0,81,1611	0/0:24,0:24:72.25:0,72,1444	0/0:28,0:28:84.27:0,84,1671	0/0:22,0:22:66.22:0,66,1292	0/0:34,0:34:99:0,102,2071	0/0:26,0:26:78.27:0,78,1565	0/0:18,0:18:54.19:0,54,1096	0/0:13,0:13:39.09:0,39,751	0/0:22,0:22:66.21:0,66,1284	0/0:26,0:26:78.26:0,78,1531	0/0:35,0:35:99:0,105,2080	0/0:25,0:25:75.24:0,75,1447	0/0:23,0:23:69.24:0,69,1401	0/0:13,0:13:39.13:0,39,773	0/0:20,0:20:57.19:0,57,1139	0/0:21,0:21:63.22:0,63,1280	0/0:28,0:28:84.29:0,84,1707	0/0:6,0:6:18.06:0,18,366
chr10	41441360	.	ACTCTCTTTCTCT	A	3491.09	PASS	AB=0.949;AC=17;AF=0.315;AN=54;BaseQRankSum=-5.077;DP=695;FS=46.110;HRun=0;HaplotypeScore=239.4813;InbreedingCoeff=0.5415;MQ=72.42;MQ0=12;MQRankSum=1.517;QD=14.02;ReadPosRankSum=-3.042;VQSLOD=1.1251;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:93.54:0,94,2422	0/0:13,0:13:35.95:0,36,757	0/1:51,0:23:21.31:21,0,220	0/0:69,0:29:4.01:0,4,497	0/1:19,0:20:64.75:163,0,65	0/1:21,0:21:99:269,0,278	0/1:20,0:20:99:175,0,428	1/1:31,0:31:70.41:685,70,0	0/0:34,0:34:71.07:0,71,1827	0/0:23,0:23:63.17:0,63,2158	0/0:16,0:16:37.87:0,38,616	0/0:19,0:19:42.11:0,42,1433	0/0:20,0:20:51.10:0,51,1726	./.	0/0:29,0:29:71.17:0,71,1943	0/0:30,0:30:48.63:0,49,629	0/0:26,0:26:67.86:0,68,2044	0/0:12,0:12:29.97:0,30,1023	1/1:18,0:18:44.93:383,45,0	1/1:9,8:18:17.98:150,18,0	1/1:23,0:24:17.87:136,18,0	0/0:23,0:23:54.04:0,54,1260	0/0:31,0:31:75.17:0,75,2663	0/0:18,0:18:29.28:0,29,680	0/0:21,0:21:44.13:0,44,1120	0/1:14,3:19:99:796,0,149	1/1:16,0:20:41.94:625,42,0	1/1:4,0:6:11.91:88,12,0
chr10	41441403	.	CTCTGTGTGTGTG	C	4738.72	PASS	AB=0.973;AC=29;AF=0.558;AN=52;BaseQRankSum=5.951;DP=605;FS=50.373;HRun=0;HaplotypeScore=217.5211;InbreedingCoeff=-0.0863;MQ=46.79;MQ0=21;MQRankSum=-4.885;QD=9.75;ReadPosRankSum=-0.881;VQSLOD=2.4204;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:41,0:40:1.81:2,0,221	0/1:16,0:15:21.76:22,0,645	./.	./.	0/0:21,0:21:23.25:0,23,1132	1/1:22,0:20:11.27:74,11,0	1/1:21,0:19:22.83:206,23,0	0/1:22,0:21:18.09:59,0,18	0/1:16,20:34:99:175,0,142	0/1:22,0:22:99:663,0,392	1/1:15,0:15:6:88,6,0	0/1:20,0:19:99:114,0,172	0/1:35,0:34:99:368,0,240	0/0:21,0:20:18.06:0,18,680	0/0:26,0:26:21.90:0,22,284	1/1:3,0:23:12.69:298,13,0	0/1:25,0:24:99:200,0,458	0/1:12,0:12:99:152,0,116	0/1:14,0:13:99:361,0,108	1/1:23,0:21:0.47:1,0,0	1/1:25,0:21:0.47:1,0,0	0/1:31,0:29:8.58:9,0,118	0/0:32,0:29:34.17:0,34,341	0/0:15,0:15:8.34:0,8,93	0/1:22,0:22:41.93:42,0,134	0/1:31,0:28:16.21:945,0,16	1/1:26,0:26:3.02:801,3,0	1/1:4,0:4:6.02:160,6,0
chr10	41441405	.	CTGTGTGTGTGTGTG	C	5805.27	PASS	AB=0.757;AC=25;AF=0.481;AN=52;BaseQRankSum=2.554;DP=607;FS=66.863;HRun=0;HaplotypeScore=228.1773;InbreedingCoeff=0.2759;MQ=47.25;MQ0=22;MQRankSum=-5.437;QD=16.40;ReadPosRankSum=-2.308;VQSLOD=1.3861;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,1:40:14.99:0,15,165	0/0:17,0:16:28.29:0,28,1100	./.	./.	0/0:22,0:22:36.07:0,36,1695	0/0:12,0:21:1.81:0,2,6	1/1:12,0:18:2.28:51,2,0	1/1:9,18:24:46.84:668,47,0	0/1:34,0:34:58.29:58,0,109	0/1:11,0:21:99:295,0,257	1/1:6,0:15:1.82:5,2,0	0/1:12,1:18:46.25:259,0,46	0/1:15,0:34:99:167,0,183	0/0:21,0:20:18.06:0,18,967	0/0:12,0:26:20.80:0,21,275	1/1:23,0:23:13.93:347,14,0	0/0:24,0:24:14.66:0,15,486	0/1:12,0:11:52.45:52,0,58	0/1:6,9:14:99:676,0,115	1/1:14,9:21:0.47:1,0,0	1/1:10,15:21:0.47:1,0,0	0/0:12,0:29:8.73:0,9,101	0/0:22,0:29:17.65:0,18,155	0/0:11,0:15:8.15:0,8,54	0/1:10,0:21:12.31:12,0,68	1/1:13,19:30:52.33:1743,52,0	1/1:11,15:26:18.85:1231,19,0	1/1:2,2:4:6.02:237,6,0
chr10	41441435	.	GTATGTGTGTGTA	G	2552.87	PASS	AB=0.982;AC=15;AF=0.268;AN=56;BaseQRankSum=11.090;DP=669;FS=0.482;HRun=0;HaplotypeScore=213.9856;InbreedingCoeff=-0.2052;MQ=47.17;MQ0=26;MQRankSum=-7.399;QD=8.45;ReadPosRankSum=7.035;VQSLOD=1.9849;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:40,1:40:15.97:0,16,508	0/0:11,0:10:24.08:0,24,1121	0/0:30,0:8:21.54:0,22,369	0/0:28,0:8:21.01:0,21,297	0/0:27,0:27:60.20:0,60,2157	0/0:21,0:21:18.06:0,18,317	0/1:18,0:16:13.43:13,0,278	0/0:37,0:34:19.10:0,19,902	0/1:31,0:32:99:104,0,205	0/1:20,0:20:99:176,0,327	0/1:15,1:16:51.90:52,0,275	0/1:18,0:18:99:125,0,245	0/1:32,1:33:99:174,0,385	0/0:25,0:24:51.17:0,51,1519	0/1:29,0:29:9.97:10,0,358	0/1:24,2:26:99:297,0,126	0/0:21,0:20:38.75:0,39,507	0/1:14,0:12:4.77:5,0,259	0/1:17,0:16:99:317,0,395	0/0:30,0:30:35.65:0,36,571	0/0:26,0:22:11.79:0,12,188	0/0:32,0:30:23.33:0,23,402	0/1:18,0:16:11.52:12,0,136	0/0:15,0:15:11.87:0,12,192	0/0:21,0:22:5.69:0,6,193	0/1:32,0:30:99:717,0,361	0/1:24,0:24:13.96:585,0,14	1/1:4,0:4:6.02:123,6,0
chr10	41442800	.	C	CAA	7698.47	PASS	AB=0.650;AC=46;AF=0.821;AN=56;BaseQRankSum=-0.112;DP=620;FS=4.578;HRun=13;HaplotypeScore=106.8728;InbreedingCoeff=0.5002;MQ=73.76;MQ0=0;MQRankSum=-1.274;QD=13.41;ReadPosRankSum=-3.224;VQSLOD=3.2748;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,26:37:56.12:680,56,0	0/0:11,0:12:29.68:0,30,250	0/0:15,0:11:8.68:0,9,64	0/0:19,0:16:10.90:0,11,84	1/1:15,1:18:33.63:304,34,0	1/1:11,18:35:53.92:577,54,0	1/1:5,16:23:25.33:272,25,0	1/1:8,9:18:33.06:392,33,0	0/1:7,0:22:2.95:74,0,3	1/1:12,13:28:50.58:592,51,0	1/1:4,9:15:29.42:305,29,0	1/1:5,1:24:3.74:116,4,0	0/1:16,1:20:23.94:207,0,24	1/1:11,0:21:21:210,21,0	1/1:11,20:33:15.74:347,16,0	1/1:8,16:25:29.58:353,30,0	1/1:7,17:28:35.58:415,36,0	1/1:3,23:30:38.51:428,39,0	1/1:7,6:14:23.52:245,24,0	1/1:6,12:24:43.82:405,44,0	1/1:6,13:21:15.05:203,15,0	1/1:8,0:29:24.32:148,24,0	0/1:3,1:13:2.95:78,0,3	0/1:6,0:24:15.92:16,0,105	1/1:7,13:25:11.09:328,11,0	1/1:8,16:28:56.57:681,57,0	1/1:5,5:11:14.94:153,15,0	1/1:1,3:7:17.02:168,17,0
chr10	41442911	.	CGT	C	2083.54	PASS	AB=0.874;AC=18;AF=0.321;AN=56;BaseQRankSum=-0.350;DP=717;FS=2.244;HRun=0;HaplotypeScore=121.7387;InbreedingCoeff=0.3102;MQ=56.76;MQ0=10;MQRankSum=3.055;QD=6.76;ReadPosRankSum=2.425;VQSLOD=3.1171;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:9,23:31:54.15:613,54,0	0/0:8,0:8:11.68:0,12,125	0/0:35,0:20:5.99:0,6,48	0/0:41,0:25:14.66:0,15,129	0/1:10,0:35:4.35:4,0,41	0/0:25,0:27:20.36:0,20,180	0/0:17,0:30:0.93:0,1,17	0/1:28,1:28:1:1,0,344	0/0:9,0:21:15.01:0,15,151	1/1:22,2:27:23.17:165,23,0	0/1:7,12:19:9.97:338,0,10	0/0:10,0:20:16.78:0,17,127	0/0:10,0:16:18:0,18,174	0/0:6,0:20:3.87:0,4,19	0/1:15,2:19:51.87:52,0,248	1/1:5,11:17:6.93:314,7,0	0/0:19,0:39:71.22:0,71,610	1/1:9,9:22:32.39:293,32,0	0/1:13,2:15:50.05:50,0,145	0/0:36,0:36:21.39:0,21,668	0/1:43,0:42:14.36:14,0,593	0/0:20,0:25:27.59:0,28,235	0/0:14,0:30:17.56:0,18,129	0/0:10,0:25:12:0,12,105	1/1:4,13:19:32.76:334,33,0	0/0:33,0:32:50.97:0,51,689	0/1:22,4:26:60.05:60,0,408	0/1:4,1:5:23.09:23,0,125
chr10	41445911	.	C	CA	2580.79	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-10.696;DP=686;FS=2.587;HRun=8;HaplotypeScore=75.1314;InbreedingCoeff=0.9995;MQ=81.74;MQ0=0;MQRankSum=-3.144;QD=25.81;ReadPosRankSum=0.841;VQSLOD=4.4599;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,120,1092	0/0:10,0:10:27.01:0,27,247	0/0:18,0:19:43.94:0,44,370	0/0:17,0:17:35.89:0,36,311	1/1:3,25:28:72.21:831,72,0	1/1:4,19:24:53.98:595,54,0	1/1:2,18:20:42.12:485,42,0	0/0:20,0:20:51.03:0,51,467	0/0:25,0:25:65.98:0,66,591	0/0:25,0:25:65.99:0,66,592	0/0:22,0:22:60.02:0,60,549	0/0:28,0:28:75.01:0,75,677	0/0:30,0:30:52.69:0,53,722	1/1:3,25:28:72.21:831,72,0	0/0:24,0:24:57.02:0,57,518	0/0:31,0:31:84:0,84,758	0/0:29,0:28:75.03:0,75,686	0/0:21,0:21:57:0,57,516	0/0:25,0:25:69.02:0,69,628	0/0:34,0:34:90.04:0,90,824	0/0:24,0:24:63.03:0,63,577	0/0:26,0:26:72.02:0,72,655	0/0:20,0:20:54:0,54,489	0/0:26,0:26:69.01:0,69,626	0/0:19,0:19:51.01:0,51,460	0/0:25,0:25:52.57:0,53,546	0/0:28,0:27:74.99:0,75,675	0/0:10,0:10:29.98:0,30,267
chr10	41446782	.	GGT	G	3027.04	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=11.620;DP=552;FS=6.163;HRun=0;HaplotypeScore=70.9728;InbreedingCoeff=0.9996;MQ=67.97;MQ0=0;MQRankSum=0.181;QD=34.40;ReadPosRankSum=2.926;VQSLOD=5.9289;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:78.24:0,78,1388	0/0:12,0:12:36.11:0,36,630	0/0:12,0:11:29.84:0,30,474	0/0:18,0:18:47.81:0,48,771	1/1:4,26:30:72.19:1007,72,0	0/0:24,0:24:69.24:0,69,1264	0/0:20,0:20:51.16:0,51,876	0/0:18,0:18:42.14:0,42,737	1/1:0,10:10:30.10:425,30,0	0/0:21,0:21:57.19:0,57,1017	0/0:20,0:20:60.19:0,60,1067	0/0:18,0:18:51.17:0,51,922	1/1:3,15:18:45.14:617,45,0	1/1:1,14:15:39.13:559,39,0	0/0:15,0:15:45.12:0,45,762	0/0:19,0:19:48.15:0,48,849	0/0:20,0:20:57.16:0,57,969	0/0:19,0:19:51.17:0,51,934	0/0:20,0:20:54.15:0,54,920	0/0:34,0:34:99:0,99,1795	0/0:15,0:15:36.12:0,36,660	1/1:1,14:15:42.14:595,42,0	0/0:21,0:21:60.13:0,60,966	0/0:29,0:29:84.24:0,84,1481	0/0:26,0:26:72.25:0,72,1310	0/0:20,0:20:57.20:0,57,1035	0/0:20,0:20:60.21:0,60,1089	0/0:14,0:14:42.14:0,42,769
chr10	41446783	.	GT	G	366.45	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=13.006;DP=552;FS=5.297;HRun=1;HaplotypeScore=69.6563;InbreedingCoeff=0.9983;MQ=69.01;MQ0=0;MQRankSum=-1.194;QD=4.16;ReadPosRankSum=3.288;VQSLOD=0.7220;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:81.27:0,81,1258	0/0:12,0:12:36.12:0,36,575	0/0:13,0:13:36.09:0,36,487	0/0:18,0:18:41.12:0,41,633	1/1:27,3:30:39.23:146,39,0	0/0:25,0:25:72.23:0,72,1122	0/0:20,0:20:60.17:0,60,883	0/0:17,0:17:48.15:0,48,711	1/1:10,0:10:22.92:81,23,0	0/0:21,0:21:60.20:0,60,946	0/0:20,0:20:60.19:0,60,935	0/0:18,0:18:54.17:0,54,819	1/1:18,0:18:22.20:93,22,0	1/1:14,1:15:29.01:91,29,0	0/0:15,0:15:45.14:0,45,695	0/0:19,0:19:51.17:0,51,802	0/0:21,0:21:60.19:0,60,929	0/0:19,0:19:51.17:0,51,814	0/0:21,0:21:60.18:0,60,901	0/0:35,0:35:99:0,105,1597	0/0:14,0:14:36.12:0,36,575	1/1:14,1:15:32.59:129,33,0	0/0:20,0:20:60.20:0,60,938	0/0:29,0:29:87.25:0,87,1360	0/0:24,0:24:72.23:0,72,1127	0/0:20,0:20:60.18:0,60,933	0/0:21,0:21:63.20:0,63,979	0/0:14,0:14:42.14:0,42,670
chr10	41446785	.	GT	G	401.95	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=13.072;DP=540;FS=7.104;HRun=1;HaplotypeScore=67.6964;InbreedingCoeff=0.8600;MQ=68.33;MQ0=0;MQRankSum=-1.089;QD=4.47;ReadPosRankSum=3.476;VQSLOD=0.6027;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:78.24:0,78,1192	0/0:12,0:12:36.11:0,36,541	0/0:12,0:12:32.84:0,33,461	0/0:19,0:18:48:0,48,727	1/1:27,4:31:29.72:192,30,0	0/0:24,0:24:72.25:0,72,1126	0/0:18,0:18:51.11:0,51,747	0/0:16,0:16:45.14:0,45,682	0/1:11,0:11:5.80:58,0,6	0/0:20,0:20:57.19:0,57,871	0/0:21,0:21:63.21:0,63,970	0/0:17,0:17:51.17:0,51,798	1/1:17,0:17:26.55:106,27,0	1/1:14,1:15:32.44:117,32,0	0/0:15,0:15:45.13:0,45,679	0/0:16,0:16:48.15:0,48,729	0/0:20,0:20:60.17:0,60,887	0/0:18,0:18:51.17:0,51,796	0/0:20,0:20:57.16:0,57,844	0/0:35,0:35:99:0,102,1584	0/0:12,0:12:36.12:0,36,563	1/1:16,0:16:4.64:87,5,0	0/0:20,0:20:60.13:0,60,846	0/0:30,0:30:90.20:0,90,1294	0/0:24,0:24:72.25:0,72,1126	0/0:19,0:19:57.19:0,57,888	0/0:21,0:21:63.21:0,63,978	0/0:14,0:14:42.14:0,42,656
chr10	41448048	.	GA	G	1352.12	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.799;DP=629;FS=0.000;HRun=7;HaplotypeScore=65.2319;InbreedingCoeff=0.9193;MQ=73.13;MQ0=0;MQRankSum=0.874;QD=22.92;ReadPosRankSum=1.323;VQSLOD=3.6880;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,29:33:84.19:857,84,0	0/0:4,0:4:9.02:0,9,105	0/0:22,0:21:38.03:0,38,482	0/0:31,0:27:14.63:0,15,510	0/0:25,0:25:69.17:0,69,838	0/0:29,0:29:84.27:0,84,1056	0/0:21,0:21:54.17:0,54,679	0/0:28,0:28:81.22:0,81,963	0/0:21,0:21:60.19:0,60,755	0/0:23,0:23:63.19:0,63,778	0/0:23,0:23:54.17:0,54,679	0/0:24,0:24:69.21:0,69,857	0/0:20,0:20:57.17:0,57,700	0/0:18,0:18:51.11:0,51,622	0/0:30,0:30:87.24:0,87,1047	1/1:4,22:25:9.66:610,10,0	0/0:23,0:23:63.19:0,63,779	0/0:10,0:10:27.07:0,27,326	0/0:21,1:22:23.53:0,24,611	0/0:18,0:18:54.05:0,54,625	0/0:22,0:22:57.18:0,57,717	0/0:25,0:25:72.10:0,72,830	0/0:22,0:22:60.19:0,60,755	0/0:37,2:39:44.13:0,44,1182	0/0:18,0:18:51.14:0,51,616	0/0:25,0:25:69.21:0,69,856	0/0:22,0:22:60.19:0,60,755	0/0:4,0:4:12.04:0,12,151
chr10	41448346	.	GTTTTTTGT	G	12939.91	PASS	AB=0.552;AC=38;AF=0.679;AN=56;BaseQRankSum=-4.860;DP=579;FS=0.000;HRun=0;HaplotypeScore=196.0559;InbreedingCoeff=0.0899;MQ=66.53;MQ0=7;MQRankSum=-5.743;QD=25.13;ReadPosRankSum=-0.193;VQSLOD=4.1392;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:14,0:25:25.93:48,0,26	0/0:9,0:9:27.09:0,27,967	0/0:23,0:21:59.38:0,59,1466	0/0:32,0:21:57.99:0,58,1406	0/1:7,0:21:8.92:102,0,9	1/1:0,29:29:57.20:1556,57,0	1/1:1,19:20:24.08:659,24,0	1/1:1,20:21:60.11:1015,60,0	1/1:2,19:20:30.10:811,30,0	0/1:1,0:38:99:364,0,799	0/1:1,0:17:99:124,0,315	0/1:0,0:25:7.91:8,0,554	1/1:2,19:21:36.12:973,36,0	0/1:5,0:19:20.18:20,0,75	0/1:1,0:23:36.95:37,0,601	0/1:11,0:21:54.98:81,0,55	1/1:1,20:21:24.08:589,24,0	0/1:0,0:13:0.12:0,0,183	1/1:0,6:6:18.06:462,18,0	1/1:1,18:19:48.16:1209,48,0	1/1:9,0:9:4.25:92,4,0	1/1:1,31:31:63.21:1467,63,0	0/1:1,0:18:99:160,0,245	0/1:1,0:23:6.30:6,0,436	0/1:1,0:15:12.74:13,0,368	1/1:0,19:19:51.14:1025,51,0	1/1:1,30:31:72.25:1973,72,0	1/1:0,5:5:6.02:148,6,0
chr10	41448348	.	T	TTG	2973.41	PASS	AB=0.986;AC=27;AF=0.482;AN=56;BaseQRankSum=-5.905;DP=570;FS=21.107;HRun=0;HaplotypeScore=175.0662;InbreedingCoeff=-0.0889;MQ=65.68;MQ0=7;MQRankSum=1.350;QD=7.05;ReadPosRankSum=-6.181;VQSLOD=0.8257;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:23:37.70:140,38,0	0/0:9,0:9:27.09:0,27,410	0/0:23,0:20:57.16:0,57,805	0/0:31,0:20:47.16:0,47,730	1/1:21,0:21:15.34:56,15,0	0/0:29,0:29:26.85:0,27,126	0/1:19,0:19:5.74:6,0,30	1/1:21,0:21:30.17:602,30,0	0/0:20,0:19:21.01:0,21,73	0/1:38,1:38:68.08:484,0,68	0/1:16,1:17:20.53:231,0,21	0/1:25,0:25:59.41:60,0,59	0/1:21,0:21:19.98:20,0,57	1/1:19,0:19:21.14:84,21,0	0/1:23,1:23:56.58:74,0,57	1/1:19,0:19:27.11:155,27,0	0/1:20,1:21:20.99:93,0,21	0/1:13,0:13:17.84:19,0,18	0/1:6,0:6:26.92:32,0,27	0/1:18,0:18:69.04:92,0,69	1/1:0,9:9:6.90:101,7,0	0/1:32,0:31:47.71:324,0,48	0/1:17,0:17:16.74:209,0,17	0/1:23,1:23:38.08:38,0,49	0/1:15,0:15:22.88:23,0,42	0/1:19,0:19:14.89:313,0,15	0/0:31,0:31:57.86:0,58,215	0/0:5,0:5:2.37:0,2,8
chr10	41448349	.	T	TG	2342.84	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=-4.238;DP=575;FS=0.365;HRun=0;HaplotypeScore=173.2872;InbreedingCoeff=0.1837;MQ=65.39;MQ0=8;MQRankSum=0.868;QD=6.66;ReadPosRankSum=-8.990;VQSLOD=1.2821;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:16,10:26:65.35:686,65,0	0/0:9,0:9:27.09:0,27,373	0/0:23,0:20:56.89:0,57,720	0/0:32,0:21:56.61:0,57,683	1/1:15,6:21:32.57:346,33,0	0/0:29,0:29:27.98:0,28,96	0/0:19,0:19:4.91:0,5,30	1/1:20,0:20:16.23:137,16,0	0/0:20,0:19:9.65:0,10,42	0/1:40,0:39:37.56:114,0,38	0/1:17,0:17:13.61:51,0,14	0/1:25,0:25:33.86:56,0,34	0/0:19,0:19:7.22:0,7,42	1/1:17,4:21:52.91:417,53,0	0/1:24,0:23:18.20:132,0,18	1/1:14,5:19:49.33:429,49,0	0/0:21,0:21:4.88:0,5,24	0/0:13,0:13:8.37:0,8,29	0/0:6,0:6:6.56:0,7,24	0/1:18,0:18:15.31:15,0,44	1/1:8,0:8:4.83:19,5,0	0/1:32,0:31:12.49:12,0,29	0/1:17,0:17:8.57:9,0,9	0/1:26,0:25:5.25:5,0,35	0/1:14,0:14:19.50:28,0,20	0/1:19,0:19:11.44:61,0,11	0/0:32,0:31:49.99:0,50,157	0/1:5,0:5:1.24:6,0,1
chr10	41448353	.	GT	G	2373.39	PASS	AB=1.000;AC=27;AF=0.482;AN=56;BaseQRankSum=14.138;DP=589;FS=12.797;HRun=6;HaplotypeScore=174.7463;InbreedingCoeff=0.6293;MQ=62.79;MQ0=8;MQRankSum=-14.864;QD=7.28;ReadPosRankSum=4.872;VQSLOD=-0.0701;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,16:26:26.72:431,27,0	0/0:10,0:10:30.10:0,30,418	0/0:25,0:21:60.18:0,60,791	0/0:32,0:21:50.99:0,51,645	1/1:6,15:21:28.39:412,28,0	1/1:29,0:29:45.69:176,46,0	1/1:19,0:19:19.60:83,20,0	0/1:20,0:20:32.57:33,0,112	1/1:20,0:19:24.34:101,24,0	0/0:43,0:42:99:0,121,976	0/0:18,0:18:44.48:0,44,321	0/0:25,0:25:57.40:0,57,374	1/1:19,0:19:28.75:117,29,0	1/1:5,16:21:34.36:426,34,0	0/0:27,0:26:63.57:0,64,444	1/1:6,12:18:19.72:303,20,0	0/1:21,0:21:10.73:27,0,11	0/0:14,0:14:26.59:0,27,192	0/1:6,0:6:2.06:26,0,2	1/1:18,0:18:7.95:79,8,0	0/0:5,0:5:4.59:0,5,19	0/1:32,0:31:45.16:77,0,45	0/0:19,0:19:39.57:0,40,304	0/0:28,0:27:52.41:0,52,403	0/0:17,0:17:39.55:0,40,308	0/1:19,0:19:55.01:61,0,55	1/1:31,1:31:56.61:196,57,0	1/1:5,0:5:5.37:35,5,0
chr10	41450058	.	GA	G	2619.34	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.229;DP=648;FS=4.214;HRun=2;HaplotypeScore=62.6612;InbreedingCoeff=0.9983;MQ=82.45;MQ0=0;MQRankSum=0.042;QD=33.16;ReadPosRankSum=2.539;VQSLOD=3.8805;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:72.24:0,72,1078	0/0:7,0:7:21.07:0,21,315	0/0:19,0:20:60.12:0,60,792	0/0:22,0:22:66.06:0,66,917	0/0:31,0:31:93.32:0,93,1393	0/0:26,0:26:78.26:0,78,1167	0/0:15,0:15:45.14:0,45,652	0/0:47,0:47:99:0,132,1941	1/1:2,27:29:75.24:974,75,0	0/0:25,0:25:75.25:0,75,1116	0/0:16,0:16:48.12:0,48,691	0/0:17,0:17:51.17:0,51,765	1/1:1,27:28:78.25:1013,78,0	0/0:23,0:23:66.21:0,66,967	0/0:23,0:23:69.23:0,69,1015	0/0:19,0:19:57.19:0,57,854	0/0:20,0:20:60.19:0,60,880	0/0:14,0:14:39.13:0,39,585	0/0:17,0:17:51.17:0,51,764	0/0:32,0:32:96.27:0,96,1395	0/0:23,0:23:69.22:0,69,1013	1/1:1,21:22:60.19:775,60,0	0/0:34,0:34:99:0,102,1527	0/0:18,0:18:51.17:0,51,764	0/0:10,0:10:30.10:0,30,450	0/0:30,0:30:84.28:0,84,1259	0/0:30,0:30:90.30:0,90,1347	0/0:24,0:24:72.24:0,72,1079
chr10	41450368	.	TGGCAAGTGTGTG	T	12694.79	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=15.500;DP=660;FS=22.395;HRun=0;HaplotypeScore=229.2735;InbreedingCoeff=0.9762;MQ=73.86;MQ0=1;MQRankSum=-11.970;QD=53.34;ReadPosRankSum=1.734;VQSLOD=3.1604;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,12:18:27.09:712,27,0	0/0:15,0:15:45.15:0,45,2530	0/0:30,0:26:68.42:0,68,2482	0/0:18,0:17:41.57:0,42,1429	0/0:32,0:32:87.26:0,87,4113	0/0:27,0:27:69.24:0,69,3576	0/0:26,0:26:66.21:0,66,3244	1/1:6,17:23:51.13:1493,51,0	0/0:28,0:27:60.16:0,60,3035	0/0:19,0:19:48.16:0,48,2588	0/0:10,0:10:17.73:0,18,1067	0/0:25,0:25:63.21:0,63,3440	0/0:28,0:28:72.25:0,72,3762	0/0:23,0:23:54.17:0,54,2962	0/0:17,0:17:45.11:0,45,2432	1/1:2,20:22:42.14:1425,42,0	1/1:5,14:19:9.03:323,9,0	0/0:5,0:5:12.04:0,12,719	1/1:2,16:18:48.14:1309,48,0	1/1:9,26:35:48.16:1539,48,0	1/1:8,12:21:9.01:193,9,0	0/0:40,0:40:99:0,102,5376	0/0:26,0:26:72.24:0,72,3859	0/0:41,0:41:99:0,114,6113	0/0:12,0:12:36.04:0,36,1701	1/1:1,29:30:78.25:2478,78,0	1/1:13,27:40:69.24:2386,69,0	1/1:1,11:12:24.08:838,24,0
chr10	41450447	.	A	AGTGTGT	6182.21	PASS	AB=0.969;AC=7;AF=0.125;AN=56;BaseQRankSum=8.040;DP=786;FS=0.000;HRun=0;HaplotypeScore=193.9422;InbreedingCoeff=0.8943;MQ=60.50;MQ0=1;MQRankSum=-11.756;QD=43.85;ReadPosRankSum=-2.783;VQSLOD=3.9500;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:75.16:0,75,1424	0/0:13,0:13:30.09:0,30,623	0/0:33,0:32:40.31:0,40,1426	0/0:42,0:42:52.26:0,52,1757	0/0:32,0:31:87.30:0,87,1913	0/0:23,0:23:57.20:0,57,1264	0/0:32,0:32:87.77:0,88,1915	0/0:46,0:46:99:0,101,2408	1/1:11,27:38:72.25:2169,72,0	0/0:27,0:27:78.26:0,78,1635	0/0:17,0:17:42.14:0,42,930	0/0:30,0:30:69.23:0,69,1504	1/1:9,23:34:75.25:2280,75,0	0/0:35,0:35:64.69:0,65,2065	0/0:28,0:28:72.16:0,72,1504	0/1:30,1:31:1.96:2,0,1362	0/0:21,0:21:45.07:0,45,888	0/0:10,0:10:23.99:0,24,436	0/0:22,0:22:54.17:0,54,1090	0/0:28,0:28:69.07:0,69,1316	0/0:29,0:29:68.93:0,69,1141	1/1:11,22:37:56.79:1731,57,0	0/0:19,0:19:51.15:0,51,1033	0/0:36,0:36:93.19:0,93,2002	0/0:17,0:17:42.14:0,42,866	0/0:29,0:29:84.29:0,84,1767	0/0:31,0:31:72.18:0,72,1480	0/0:14,0:14:39.13:0,39,834
chr10	41450719	.	TA	T	2694.60	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=9.994;DP=734;FS=19.174;HRun=6;HaplotypeScore=77.0800;InbreedingCoeff=0.9922;MQ=66.54;MQ0=0;MQRankSum=0.680;QD=23.85;ReadPosRankSum=2.043;VQSLOD=2.1484;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:84.23:0,84,1070	0/0:19,0:19:57.09:0,57,709	0/0:11,0:11:24.07:0,24,291	0/0:13,0:13:24.03:0,24,289	0/0:28,0:28:75.21:0,75,955	0/0:31,0:31:84.26:0,84,1089	0/0:18,0:18:48.16:0,48,629	0/0:29,0:29:75.23:0,75,959	1/1:5,23:28:60.15:645,60,0	0/0:40,0:40:99:0,117,1526	0/0:29,0:29:84.27:0,84,1102	1/1:2,26:28:72.18:774,72,0	1/1:6,23:29:63.15:676,63,0	0/0:38,0:38:99:0,114,1463	0/0:31,0:31:78.25:0,78,1026	0/0:24,0:24:63.20:0,63,829	0/0:25,0:25:69.22:0,69,905	0/0:8,0:8:18.06:0,18,237	0/0:17,0:17:48.13:0,48,593	0/0:33,0:33:90.29:0,90,1181	0/0:32,0:32:93.29:0,93,1209	1/1:2,26:28:72.14:760,72,0	0/0:34,0:34:93.30:0,93,1222	0/0:38,0:38:99:0,111,1445	0/0:18,0:18:54.17:0,54,696	0/0:28,0:28:72.23:0,72,947	0/0:36,0:36:87.25:0,87,1102	0/0:7,0:7:15.05:0,15,197
chr10	41450933	.	A	AAG	2350.51	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.792;DP=688;FS=39.134;HRun=0;HaplotypeScore=101.4779;InbreedingCoeff=0.9741;MQ=73.88;MQ0=8;MQRankSum=-0.371;QD=34.07;ReadPosRankSum=1.698;VQSLOD=2.2409;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:41:99:0,102,1207	0/0:13,0:13:30.07:0,30,349	0/0:53,0:24:35.03:0,35,317	0/0:75,0:31:9.92:0,10,189	0/0:19,0:19:51.16:0,51,630	0/0:26,0:26:66.17:0,66,780	0/0:22,0:22:57.16:0,57,693	0/0:25,0:25:29.49:0,29,593	1/1:7,16:23:57.19:927,57,0	0/0:31,0:31:71.72:0,72,832	0/0:14,0:14:39.12:0,39,483	0/0:20,0:20:48.15:0,48,595	1/1:8,13:21:19.97:815,20,0	0/0:25,0:25:63.19:0,63,767	0/0:28,0:28:75.05:0,75,882	0/0:22,0:22:48.13:0,48,581	0/0:25,0:23:57.16:0,57,692	0/0:10,0:10:24.08:0,24,298	0/0:12,0:12:27.07:0,27,322	0/0:22,0:22:42.13:0,42,521	0/0:13,0:13:33.06:0,33,392	1/1:10,15:25:17.14:749,17,0	0/0:18,0:18:48.14:0,48,583	0/0:20,0:20:51.13:0,51,615	0/0:18,0:18:48.15:0,48,595	0/0:25,0:25:21.97:0,22,692	0/0:28,0:28:72.20:0,72,866	0/0:10,0:10:24.08:0,24,297
chr10	41450992	.	AAG	A	1181.99	PASS	AB=0.926;AC=7;AF=0.125;AN=56;BaseQRankSum=9.411;DP=667;FS=0.552;HRun=0;HaplotypeScore=106.7312;InbreedingCoeff=0.7850;MQ=74.05;MQ0=1;MQRankSum=0.683;QD=14.41;ReadPosRankSum=1.536;VQSLOD=3.1653;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:96.33:0,96,1569	0/0:13,0:13:39.06:0,39,582	0/0:40,0:25:14.73:0,15,478	0/0:53,0:35:1.37:0,1,630	0/0:24,1:25:31.67:0,32,985	0/0:25,0:25:60.19:0,60,950	0/0:25,0:25:66.22:0,66,1075	0/0:24,0:24:32.96:0,33,956	1/1:6,14:20:36.11:450,36,0	0/0:21,0:21:45.15:0,45,714	0/0:21,0:21:51.17:0,51,842	0/0:16,0:16:45.15:0,45,735	1/1:4,8:12:27.07:323,27,0	0/0:26,0:26:69.23:0,69,1089	0/0:26,0:26:60.21:0,60,991	0/0:22,0:22:60.19:0,60,948	0/0:23,0:22:63.21:0,63,1029	0/0:5,0:5:15.05:0,15,247	0/0:11,0:11:24.08:0,24,386	0/0:29,0:29:78.23:0,78,1192	0/0:27,0:27:60.15:0,60,979	1/1:5,20:25:48.01:546,48,0	0/1:23,2:25:8.85:9,0,891	0/0:17,0:17:45.11:0,45,713	0/0:25,0:24:63.21:0,63,1017	0/0:26,0:26:66.23:0,66,1083	0/0:33,0:33:75.24:0,75,1207	0/0:19,0:19:52.42:0,52,838
chr10	41451208	.	TTTTG	T	1315.55	PASS	AB=0.955;AC=7;AF=0.125;AN=56;BaseQRankSum=7.680;DP=646;FS=3.186;HRun=0;HaplotypeScore=104.9590;InbreedingCoeff=0.8844;MQ=71.29;MQ0=1;MQRankSum=-1.269;QD=19.93;ReadPosRankSum=1.286;VQSLOD=3.5402;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:75.21:0,75,1694	0/0:12,0:12:30.06:0,30,630	0/0:17,0:13:12.04:0,12,271	0/0:29,0:28:47.90:0,48,938	0/0:23,0:23:54.17:0,54,1239	0/0:41,0:41:90.29:0,90,2097	0/0:27,0:27:54.18:0,54,1321	0/0:28,0:28:36.12:0,36,874	1/1:5,5:10:18.02:269,18,0	0/0:36,0:35:75.25:0,75,1712	0/0:16,0:16:42.14:0,42,968	0/0:22,0:22:54.17:0,54,1236	1/1:5,9:14:33.06:473,33,0	0/0:17,0:17:39.13:0,39,896	0/0:26,0:26:63.20:0,63,1492	0/1:20,1:21:1.63:2,0,1003	0/0:25,0:25:63.20:0,63,1466	0/0:9,0:9:20.90:0,21,454	0/0:23,0:23:39.11:0,39,790	0/0:32,0:32:72.21:0,72,1613	0/0:21,0:21:51.18:0,51,1240	1/1:6,15:21:48.07:715,48,0	0/0:21,0:21:48.15:0,48,1082	0/0:16,0:16:48.16:0,48,1127	0/0:24,0:24:69.24:0,69,1629	0/0:23,0:23:57.18:0,57,1340	0/0:46,0:46:99:0,111,2574	0/0:16,0:16:39.13:0,39,953
chr10	41451293	.	ACT	A	2450.44	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=12.501;DP=690;FS=9.829;HRun=0;HaplotypeScore=92.1106;InbreedingCoeff=0.9794;MQ=83.58;MQ0=0;MQRankSum=-6.139;QD=38.90;ReadPosRankSum=1.985;VQSLOD=5.6184;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:66.23:0,66,1235	0/0:11,0:11:30.10:0,30,552	0/0:20,0:20:60.20:0,60,1085	0/0:23,0:23:63.22:0,63,1168	0/0:38,0:38:99:0,111,2015	0/0:43,0:43:99:0,126,2343	0/0:29,0:29:87.27:0,87,1594	0/0:27,0:27:81.26:0,81,1437	1/1:0,19:19:57.17:795,57,0	0/0:27,0:27:75.21:0,75,1308	0/0:17,0:17:51.12:0,51,918	0/0:26,0:26:78.25:0,78,1429	1/1:0,23:23:66.22:968,66,0	0/0:21,0:21:63.22:0,63,1169	0/0:23,0:23:69.24:0,69,1292	0/0:24,0:24:69.23:0,69,1262	0/0:30,0:30:87.28:0,87,1595	0/0:3,0:3:9.03:0,9,167	0/0:26,0:26:75.26:0,75,1404	0/0:36,0:36:99:0,105,1935	0/0:25,0:25:75.26:0,75,1396	1/1:0,21:21:57.19:830,57,0	0/0:23,0:23:66.23:0,66,1229	0/0:20,0:20:60.15:0,60,1055	0/0:28,0:28:78.27:0,78,1460	0/0:37,0:37:99:0,111,2079	0/0:27,0:27:81.26:0,81,1467	0/0:19,0:19:57.20:0,57,1066
chr10	41451335	.	C	CT	2522.01	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=12.362;DP=631;FS=8.364;HRun=1;HaplotypeScore=74.2708;InbreedingCoeff=0.9909;MQ=83.27;MQ0=0;MQRankSum=-5.536;QD=38.80;ReadPosRankSum=1.057;VQSLOD=4.0545;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:54.18:0,54,700	0/0:8,0:8:24.08:0,24,312	0/0:19,0:19:51.06:0,51,600	0/0:18,0:18:48.91:0,49,547	0/0:24,0:24:69.20:0,69,880	0/0:40,0:40:99:0,120,1499	0/0:20,0:20:57.17:0,57,725	0/0:21,0:21:63.19:0,63,794	1/1:1,19:20:60.19:877,60,0	0/0:22,0:22:66.21:0,66,850	0/0:22,0:22:66.21:0,66,856	0/0:26,0:26:78.24:0,78,997	1/1:2,21:23:63.17:911,63,0	0/0:21,0:21:60.16:0,60,749	0/0:21,0:21:57.15:0,57,699	0/0:21,1:22:18.25:0,18,733	0/0:28,0:28:78.24:0,78,998	0/0:5,0:5:15.05:0,15,195	0/0:22,0:22:60.17:0,60,743	0/0:37,0:37:92.25:0,92,1295	0/0:23,0:23:63.19:0,63,802	1/1:3,19:22:63.14:877,63,0	0/0:22,0:22:63.17:0,63,786	0/0:20,0:20:57.19:0,57,740	0/0:25,0:25:72.17:0,72,876	0/0:30,0:30:87.28:0,87,1129	0/0:34,0:34:99:0,99,1226	0/0:15,0:14:45.15:0,45,583
chr10	41452976	.	TA	T	2538.07	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=12.584;DP=681;FS=18.264;HRun=2;HaplotypeScore=69.7586;InbreedingCoeff=0.9938;MQ=94.95;MQ0=0;MQRankSum=-2.379;QD=35.75;ReadPosRankSum=3.101;VQSLOD=2.0195;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,154,2264	0/0:10,0:10:30.10:0,30,450	0/0:37,0:37:99:0,108,1558	0/0:25,0:25:68.59:0,69,976	0/0:18,0:18:54.16:0,54,770	0/0:36,0:36:99:0,105,1552	0/0:15,0:15:45.15:0,45,673	0/0:19,0:19:57.19:0,57,855	1/1:1,23:24:27.27:850,27,0	0/0:35,0:35:99:0,105,1556	0/0:14,0:14:42.14:0,42,630	0/0:26,0:26:78.26:0,78,1168	1/1:0,23:23:69.22:896,69,0	0/0:17,0:17:51.17:0,51,760	0/0:28,0:28:81.27:0,81,1211	0/0:23,0:23:66.21:0,66,953	0/0:21,0:21:63.21:0,63,942	0/0:18,0:18:54.13:0,54,764	0/0:25,0:25:75.25:0,75,1124	0/0:30,0:30:90.30:0,90,1345	0/0:26,0:25:78.26:0,78,1167	1/1:0,24:24:72.23:935,72,0	0/0:20,0:20:60.19:0,60,881	0/0:29,0:29:84.27:0,84,1238	0/0:25,0:25:75.23:0,75,1087	0/0:30,0:30:87.29:0,87,1304	0/0:26,0:26:78.26:0,78,1169	0/0:5,0:5:15.04:0,15,205
chr10	41453300	.	CTACGTGTTGAGA	C	4216.54	PASS	AB=0.957;AC=7;AF=0.125;AN=56;BaseQRankSum=10.007;DP=643;FS=3.024;HRun=0;HaplotypeScore=217.2167;InbreedingCoeff=0.8347;MQ=90.11;MQ0=0;MQRankSum=-10.167;QD=61.11;ReadPosRankSum=1.850;VQSLOD=4.2721;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,132,7911	0/0:8,0:8:24.08:0,24,1400	0/0:30,0:30:81.28:0,81,4096	0/0:27,0:27:71.93:0,72,3680	0/0:24,0:24:72.25:0,72,4287	0/0:31,0:31:90.31:0,90,5272	0/0:16,0:16:45.14:0,45,2433	0/0:33,0:33:96.33:0,96,5283	1/1:2,18:20:39.13:1505,39,0	0/0:26,0:26:78.26:0,78,4684	0/0:28,0:28:81.28:0,81,4731	0/0:20,0:20:60.21:0,60,3368	1/1:1,16:17:45.15:1736,45,0	0/0:18,0:18:48.16:0,48,2750	0/0:18,0:18:54.17:0,54,2893	0/1:21,1:22:49.55:50,0,3614	0/0:34,0:34:99:0,99,5989	0/0:10,0:10:30.10:0,30,1647	0/0:19,0:19:57.20:0,57,2986	0/0:28,0:28:84.29:0,84,5210	0/0:35,0:35:99:0,102,5929	1/1:0,10:10:24.08:926,24,0	0/0:20,0:20:57.20:0,57,3499	0/0:30,0:30:84.29:0,84,5040	0/0:12,0:12:33.11:0,33,1965	0/0:28,0:28:84.29:0,84,4934	0/0:27,0:27:81.26:0,81,4698	0/0:8,0:8:24.08:0,24,1501
chr10	41453941	.	GGTGTGTGTGTGT	G	2080.56	PASS	AB=0.840;AC=11;AF=0.196;AN=56;BaseQRankSum=3.673;DP=522;FS=6.411;HRun=0;HaplotypeScore=193.3443;InbreedingCoeff=0.4974;MQ=59.93;MQ0=5;MQRankSum=-4.998;QD=15.41;ReadPosRankSum=0.342;VQSLOD=1.9678;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:30:30.57:0,31,1543	0/0:3,0:4:6.02:0,6,180	0/0:21,0:12:3.01:0,3,64	0/0:20,0:14:19.99:0,20,447	0/0:15,0:20:36.12:0,36,1710	0/1:20,0:21:50.83:51,0,1223	0/0:21,0:21:30.56:0,31,1258	0/1:26,0:26:15.98:20,0,16	0/0:10,0:10:12.04:0,12,596	0/0:18,0:27:48.16:0,48,2310	0/0:8,0:16:8.06:0,8,320	0/1:3,0:13:38.60:39,0,200	0/0:20,0:22:26.11:0,26,1022	0/0:9,0:11:21.07:0,21,944	0/0:4,0:9:12.04:0,12,560	0/0:15,0:16:30.10:0,30,1479	0/0:17,0:33:63.13:0,63,1897	0/0:7,0:12:14.21:0,14,664	1/1:12,6:19:18.03:470,18,0	1/1:10,9:21:12.04:367,12,0	0/0:25,0:25:6.02:0,6,268	0/0:12,0:13:17.95:0,18,882	0/0:15,0:23:4.61:0,5,116	0/0:15,0:28:6.02:0,6,97	0/0:12,0:19:18.06:0,18,848	1/1:9,8:17:13.32:383,13,0	1/1:6,11:18:26.79:915,27,0	0/0:2,0:2:2.99:0,3,23
chr10	41454122	.	T	TAAA	6091.66	PASS	AB=0.638;AC=37;AF=0.661;AN=56;BaseQRankSum=-2.490;DP=597;FS=4.792;HRun=13;HaplotypeScore=106.4853;InbreedingCoeff=0.3754;MQ=77.61;MQ0=0;MQRankSum=-0.338;QD=12.33;ReadPosRankSum=-2.792;VQSLOD=2.4046;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:12,0:34:55.46:55,0,205	0/0:6,0:6:14.99:0,15,161	0/0:22,0:20:11.96:0,12,83	0/0:17,0:15:3.50:0,4,61	0/1:8,0:32:47.91:87,0,48	0/1:7,0:25:28.62:29,0,57	1/1:7,0:18:1.99:22,2,0	1/1:20,0:34:46.51:407,47,0	1/1:2,6:11:18.04:274,18,0	1/1:17,18:40:66.90:838,67,0	1/1:8,16:27:54.33:725,54,0	0/0:4,0:14:25.85:0,26,147	1/1:7,11:20:18.32:247,18,0	0/1:13,0:14:28.49:28,0,82	1/1:2,9:13:15:217,15,0	0/1:4,1:19:13.83:63,0,14	0/1:5,0:23:24.05:24,0,42	1/1:6,7:13:12.51:216,13,0	1/1:7,1:16:34.95:300,35,0	1/1:4,1:32:64.36:556,64,0	0/1:7,0:16:20.14:20,0,24	1/1:12,7:21:50.43:620,50,0	0/0:8,0:27:49.78:0,50,298	0/0:1,0:15:35.30:0,35,211	1/1:9,22:32:33.11:518,33,0	1/1:2,2:22:52.15:489,52,0	1/1:2,0:23:27.28:187,27,0	1/1:0,1:9:17.95:168,18,0
chr10	41455010	.	AGC	A	3470.16	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=7.792;DP=636;FS=5.907;HRun=0;HaplotypeScore=88.8155;InbreedingCoeff=0.9984;MQ=85.68;MQ0=0;MQRankSum=-2.099;QD=41.81;ReadPosRankSum=2.838;VQSLOD=5.6750;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,114,2309	0/0:12,0:12:36.12:0,36,731	0/0:30,0:30:84.25:0,84,1644	0/0:18,0:18:54.18:0,54,1044	0/0:25,0:25:75.26:0,75,1518	0/0:18,0:18:54.19:0,54,1097	0/0:19,0:19:57.20:0,57,1153	0/0:37,0:37:99:0,108,2167	0/0:27,0:27:78.25:0,78,1470	0/0:29,0:29:84.28:0,84,1662	0/0:16,0:16:45.15:0,45,907	1/1:0,30:30:87.30:1418,87,0	0/0:18,0:18:54.19:0,54,1051	0/0:11,0:11:33.11:0,33,670	0/0:24,0:24:72.25:0,72,1427	0/0:24,0:24:72.25:0,72,1463	0/0:22,0:22:66.23:0,66,1341	0/0:19,0:19:57.18:0,57,1121	0/0:16,0:16:48.16:0,48,975	0/0:22,0:22:66.23:0,66,1340	0/0:28,0:28:81.28:0,81,1633	0/0:18,0:18:54.19:0,54,1049	1/1:0,23:23:48.06:784,48,0	1/1:1,29:30:78.27:1268,78,0	0/0:16,0:16:48.16:0,48,947	0/0:29,0:29:84.28:0,84,1665	0/0:29,0:29:87.30:0,87,1756	0/0:7,0:7:21.07:0,21,427
chr10	41455164	.	TA	T	13330.29	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=7.498;DP=619;FS=5.290;HRun=8;HaplotypeScore=65.9386;InbreedingCoeff=0.9674;MQ=76.69;MQ0=0;MQRankSum=-2.084;QD=24.78;ReadPosRankSum=1.415;VQSLOD=5.8196;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,21:22:60.10:579,60,0	0/0:8,0:8:21.06:0,21,254	0/0:20,0:20:45.09:0,45,509	0/0:7,0:7:12.01:0,12,131	1/1:7,40:47:99:985,102,0	0/0:24,0:24:69.21:0,69,834	0/0:22,0:22:57.17:0,57,689	1/1:3,26:29:75.08:712,75,0	1/1:1,19:20:54.09:522,54,0	1/1:2,26:28:78.10:746,78,0	1/1:3,27:30:72.11:695,72,0	1/1:1,26:27:75.12:724,75,0	1/1:1,21:22:57.09:550,57,0	1/1:1,12:13:36.06:348,36,0	1/1:6,19:25:51.08:493,51,0	1/1:1,17:18:48.08:464,48,0	1/1:1,23:24:66.11:637,66,0	1/1:3,14:17:42.06:406,42,0	1/1:4,18:22:54.09:521,54,0	1/1:2,33:35:96.15:927,96,0	1/1:2,2:4:6.01:58,6,0	1/1:7,22:29:63.10:608,63,0	1/1:2,18:20:50.60:492,51,0	1/1:1,11:12:33.05:319,33,0	1/1:4,26:30:78.12:753,78,0	1/1:1,26:27:78.11:748,78,0	1/1:0,28:28:81.13:782,81,0	1/1:0,9:9:27.04:261,27,0
chr10	41455570	.	G	GA	1018.69	PASS	AB=0.632;AC=5;AF=0.093;AN=54;BaseQRankSum=11.919;DP=739;FS=2.407;HRun=1;HaplotypeScore=103.5624;InbreedingCoeff=0.7844;MQ=84.68;MQ0=0;MQRankSum=-6.482;QD=14.35;ReadPosRankSum=2.231;VQSLOD=3.4011;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:93.30:0,93,1206	0/0:9,0:9:24.06:0,24,297	0/0:31,0:32:77.67:0,78,963	0/0:30,0:29:73.41:0,73,875	0/0:34,0:34:99:0,99,1221	0/0:30,0:30:87.27:0,87,1116	0/0:20,0:20:57.17:0,57,724	0/0:21,0:21:57.13:0,57,688	1/1:3,18:21:34.41:418,34,0	0/0:36,0:36:99:0,105,1340	0/0:25,0:25:74.87:0,75,902	0/0:25,0:25:72.16:0,72,867	0/1:10,14:24:16.44:277,0,16	0/0:28,0:28:84.25:0,84,1062	0/0:29,0:29:84.23:0,84,1046	0/0:38,0:38:99:0,111,1384	0/0:35,0:35:99:0,102,1285	0/0:22,0:22:63.20:0,63,816	0/0:16,0:16:48.12:0,48,573	0/0:35,0:35:99:0,99,1227	0/0:29,0:29:81.21:0,81,1005	1/1:7,19:26:34.10:452,34,0	0/0:23,0:23:69.21:0,69,879	0/0:27,0:27:80.93:0,81,1019	0/0:21,0:21:63.20:0,63,817	0/0:36,0:36:99:0,99,1243	0/0:34,0:33:99:0,99,1283	./.
chr10	41455572	.	G	GA	1171.56	PASS	AB=0.583;AC=5;AF=0.093;AN=54;BaseQRankSum=11.613;DP=732;FS=0.532;HRun=1;HaplotypeScore=97.8023;InbreedingCoeff=0.7775;MQ=85.41;MQ0=0;MQRankSum=-7.466;QD=17.23;ReadPosRankSum=2.898;VQSLOD=4.0660;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,99,1356	0/0:8,0:8:24.08:0,24,330	0/0:35,0:35:73.49:0,73,1065	0/0:29,0:28:77.91:0,78,1007	0/0:33,0:33:96.32:0,96,1326	0/0:29,0:29:87.29:0,87,1209	0/0:20,0:20:60.20:0,60,833	0/0:21,0:21:63.21:0,63,866	1/1:2,19:21:31.27:509,31,0	0/0:36,0:36:99:0,108,1475	0/0:23,0:23:66.22:0,66,918	0/0:25,0:25:75.23:0,75,1012	0/1:6,15:21:59.48:325,0,59	0/0:29,0:29:87.28:0,87,1190	0/0:30,0:30:87.28:0,87,1183	0/0:37,0:37:99:0,111,1547	0/0:35,0:35:99:0,102,1426	0/0:21,0:21:63.21:0,63,879	0/0:15,0:15:45.12:0,45,603	0/0:35,0:35:99:0,102,1397	0/0:29,0:29:84.25:0,84,1137	1/1:7,19:26:23.50:467,23,0	0/0:23,0:23:69.23:0,69,961	0/0:27,0:27:81.27:0,81,1126	0/0:21,0:21:63.21:0,63,872	0/0:35,0:35:99:0,99,1380	0/0:33,0:32:99:0,99,1381	./.
chr10	41456351	.	TTGTGTGTC	T	5413.51	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=12.002;DP=770;FS=0.000;HRun=0;HaplotypeScore=208.3082;InbreedingCoeff=0.9998;MQ=64.61;MQ0=0;MQRankSum=-14.394;QD=34.48;ReadPosRankSum=-1.696;VQSLOD=4.2234;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:16,35:51:44.94:732,45,0	0/0:16,0:16:45.15:0,45,1807	0/0:33,0:29:60.72:0,61,2443	0/0:36,0:33:90.31:0,90,3109	1/1:3,24:27:50.58:803,51,0	0/0:28,0:27:75.24:0,75,2849	0/0:19,0:19:51.17:0,51,1949	0/0:46,0:45:86.78:0,87,3228	0/0:25,0:25:66.23:0,66,2629	0/0:29,0:29:84.29:0,84,3390	0/0:17,0:17:51.18:0,51,2130	0/0:27,0:27:66.23:0,66,2719	0/0:30,0:30:84.29:0,84,3456	1/1:1,23:24:57.15:1328,57,0	0/0:29,0:29:72.25:0,72,2867	1/1:2,26:28:75.05:1611,75,0	1/1:14,13:27:51.04:940,51,0	0/0:14,0:14:30.09:0,30,1095	0/0:25,0:25:57.20:0,57,1976	0/0:34,0:34:96.31:0,96,3701	0/0:32,0:32:84.25:0,84,3162	0/0:21,0:21:57.20:0,57,2320	0/0:19,0:19:42.14:0,42,1790	0/0:28,0:28:57.20:0,57,2379	0/0:23,0:23:60.21:0,60,2309	0/0:38,0:38:90.31:0,90,3651	0/0:28,0:28:75.24:0,75,3092	0/0:16,0:16:36.12:0,36,1259
chr10	41456383	.	ATG	A	2293.22	PASS	AB=0.937;AC=11;AF=0.196;AN=56;BaseQRankSum=5.830;DP=864;FS=2.468;HRun=0;HaplotypeScore=174.8523;InbreedingCoeff=0.4595;MQ=62.13;MQ0=1;MQRankSum=0.957;QD=10.77;ReadPosRankSum=3.636;VQSLOD=3.4457;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:43,3:46:11.89:12,0,821	0/0:16,1:17:10.65:0,11,705	0/0:50,0:39:69:0,69,1041	0/0:50,0:40:64.69:0,65,1027	0/1:25,2:27:38.88:39,0,458	0/0:32,1:32:46.73:0,47,1232	0/0:24,1:25:25.68:0,26,928	0/0:33,1:34:40.72:0,41,1173	0/0:27,0:27:81.28:0,81,1329	0/0:29,0:30:81.24:0,81,1228	0/0:27,1:28:37.85:0,38,1146	1/1:1,29:30:81.26:1012,81,0	0/0:38,0:38:65.25:0,65,1593	0/0:36,2:38:30.43:0,30,1506	0/0:31,2:33:6.22:0,6,1131	0/0:28,1:29:31.70:0,32,1045	0/0:9,0:35:59.92:0,60,537	0/0:15,0:15:32.87:0,33,474	0/1:28,1:29:17.52:18,0,733	0/0:42,1:43:46.73:0,47,1273	0/0:37,0:36:58.94:0,59,861	0/0:29,0:29:41.35:0,41,1193	1/1:2,17:20:50.99:614,51,0	1/1:2,23:25:60.19:750,60,0	0/1:22,2:24:2.80:3,0,1014	0/0:34,0:34:84.29:0,84,1384	0/0:26,0:26:10.61:0,11,678	0/1:11,1:12:4.39:4,0,461
chr10	41456453	.	ATGTATGTT	A	6101.62	PASS	AB=1.000;AC=28;AF=0.500;AN=56;BaseQRankSum=-5.257;DP=860;FS=44.966;HRun=0;HaplotypeScore=297.7556;InbreedingCoeff=0.0133;MQ=55.92;MQ0=5;MQRankSum=-1.087;QD=9.34;ReadPosRankSum=-11.470;VQSLOD=0.4526;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:59,0:59:16.20:16,0,2585	0/0:20,0:20:57.18:0,57,2044	0/0:24,0:13:23.80:0,24,537	0/0:30,0:20:48.33:0,48,872	0/1:29,0:29:99:160,0,217	0/0:35,0:35:90.20:0,90,2876	0/0:32,0:32:82.49:0,82,2205	1/1:40,0:39:89.82:810,90,0	0/0:30,0:30:28.73:0,29,2013	0/1:25,0:25:89.24:89,0,1220	0/1:33,0:33:99:136,0,1504	0/1:33,0:33:99:182,0,1751	0/1:36,0:36:99:134,0,1205	0/1:45,0:45:99:198,0,1430	0/1:41,0:41:99:180,0,2381	0/0:36,0:36:65.17:0,65,2539	0/1:36,0:36:1.83:2,0,1613	0/1:16,0:16:39.38:39,0,935	1/1:6,15:21:28.36:476,28,0	1/1:4,30:34:14.82:225,15,0	1/1:4,33:37:3.01:57,3,0	0/1:22,0:22:27.84:28,0,691	0/1:22,0:22:2.29:2,0,1090	0/1:20,0:19:48.02:48,0,919	0/1:30,0:30:99:237,0,1335	1/1:1,35:36:99:2101,105,0	1/1:2,32:33:36.12:933,36,0	1/1:4,0:4:5.99:48,6,0
chr10	41456457	.	ATGTT	A	6016.16	PASS	AB=0.986;AC=30;AF=0.536;AN=56;BaseQRankSum=-3.097;DP=853;FS=25.637;HRun=0;HaplotypeScore=241.3310;InbreedingCoeff=-0.1870;MQ=53.78;MQ0=6;MQRankSum=-2.505;QD=8.38;ReadPosRankSum=-14.196;VQSLOD=0.1133;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:57,0:57:70.48:70,0,1066	0/0:21,0:21:60.15:0,60,1263	0/0:23,0:10:23.08:0,23,353	0/0:28,0:18:47.82:0,48,538	0/1:29,0:29:49.15:207,0,49	0/0:32,0:32:90.19:0,90,1782	0/0:30,0:30:82.54:0,83,1391	1/1:46,0:45:99:943,111,0	0/1:31,0:31:97.04:97,0,733	0/1:22,3:25:99:353,0,430	0/1:33,0:33:99:256,0,571	0/1:33,0:33:99:208,0,713	0/1:35,0:35:99:232,0,408	0/1:46,0:46:99:269,0,383	0/1:41,0:41:99:280,0,940	0/1:37,0:37:78.67:79,0,1018	0/1:38,1:39:99:153,0,687	0/1:17,0:17:80.82:81,0,406	1/1:18,1:19:45.20:402,45,0	1/1:33,0:33:14.56:132,15,0	1/1:34,0:34:3:29,3,0	0/1:19,0:19:99:116,0,150	0/1:21,1:22:99:173,0,424	0/1:19,1:19:99:130,0,355	0/1:31,0:31:99:310,0,483	1/1:35,0:35:99:1051,105,0	1/1:34,0:33:35.87:396,36,0	1/1:2,0:2:5.99:48,6,0
chr10	41456460	.	T	TA	189.34	PASS	AB=0.844;AC=4;AF=0.071;AN=56;BaseQRankSum=4.268;DP=843;FS=2.885;HRun=0;HaplotypeScore=224.3948;InbreedingCoeff=-0.0568;MQ=53.61;MQ0=6;MQRankSum=-0.922;QD=1.46;ReadPosRankSum=0.170;VQSLOD=2.8359;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:56,1:57:99:0,103,539	0/0:20,0:20:60.20:0,60,839	0/0:21,0:8:23.74:0,24,292	0/0:28,0:17:48.63:0,49,659	0/0:24,5:29:34.91:0,35,191	0/0:32,0:32:93.27:0,93,1277	0/0:30,0:30:81.76:0,82,1115	0/0:43,0:42:49.45:0,49,419	0/0:30,0:30:82.87:0,83,423	0/0:25,0:25:64.97:0,65,282	0/0:33,0:33:88.18:0,88,437	0/0:35,0:35:44.17:0,44,391	0/1:26,10:36:76.60:77,0,170	0/1:29,16:45:99:195,0,179	0/0:42,0:42:91.31:0,91,544	0/0:36,0:36:90.79:0,91,445	0/0:38,0:38:75.61:0,76,418	0/0:17,0:17:46.02:0,46,251	0/0:18,0:18:13.31:0,13,140	0/1:31,0:31:11.99:12,0,38	0/0:34,0:34:2.59:0,3,10	0/1:15,3:18:9.47:9,0,138	0/0:21,0:21:56.42:0,56,304	0/0:21,0:20:47.83:0,48,239	0/0:32,0:32:78.87:0,79,383	0/0:35,0:35:60.27:0,60,312	0/0:33,0:32:25.36:0,25,91	0/0:2,0:2:5.74:0,6,30
chr10	41456461	.	T	TGTA	997.23	PASS	AB=0.894;AC=6;AF=0.107;AN=56;BaseQRankSum=2.420;DP=840;FS=10.012;HRun=0;HaplotypeScore=247.7767;InbreedingCoeff=-0.1288;MQ=54.25;MQ0=6;MQRankSum=-0.956;QD=5.48;ReadPosRankSum=-2.966;VQSLOD=0.8274;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:54,1:55:66.56:0,67,813	0/0:20,0:20:60.21:0,60,1079	0/0:23,0:9:20.57:0,21,316	0/0:29,0:17:47.59:0,48,666	0/0:24,0:29:13.74:0,14,254	0/0:32,0:32:96.26:0,96,1585	0/0:31,0:31:85.04:0,85,1373	0/0:43,0:42:57.25:0,57,658	0/0:31,0:31:86.71:0,87,693	0/0:26,0:26:71.19:0,71,505	0/0:33,0:33:67.53:0,68,665	0/0:33,0:33:21.75:0,22,610	0/1:26,10:36:99:388,0,261	0/1:27,16:43:99:554,0,309	0/0:42,0:42:99:0,101,929	0/0:36,0:36:95.70:0,96,763	0/1:38,0:38:11.32:11,0,491	0/0:17,0:17:47.88:0,48,399	0/1:18,0:18:40.72:41,0,192	0/1:30,0:30:7.17:7,0,54	0/0:34,0:34:2.98:0,3,23	0/1:14,3:17:99:116,0,191	0/0:21,0:21:10.72:0,11,395	0/0:21,0:20:26.83:0,27,350	0/0:32,0:32:40.56:0,41,596	0/0:35,0:35:99:0,101,700	0/0:33,0:32:35.54:0,36,243	0/0:2,0:2:5.96:0,6,44
chr10	41457249	.	CA	C	16242.93	PASS	AB=0.752;AC=40;AF=0.714;AN=56;BaseQRankSum=3.578;DP=697;FS=0.000;HRun=3;HaplotypeScore=92.2027;InbreedingCoeff=0.8676;MQ=59.82;MQ0=6;MQRankSum=2.949;QD=31.48;ReadPosRankSum=2.866;VQSLOD=4.8998;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,31:33:78.24:961,78,0	0/0:12,0:12:33.11:0,33,471	0/1:21,1:15:0.65:1,0,366	0/0:39,0:30:71.51:0,72,896	1/1:0,36:36:99:1221,99,0	0/0:32,0:32:90.30:0,90,1262	0/0:24,0:24:72.24:0,72,1000	1/1:1,32:33:96.28:1161,96,0	0/0:16,0:17:32.72:0,33,365	1/1:0,30:30:87.27:1077,87,0	1/1:2,24:26:34.60:811,35,0	1/1:1,14:15:42.13:520,42,0	0/0:26,0:26:60.02:0,60,644	1/1:0,22:22:63.20:781,63,0	1/1:0,21:21:63.20:781,63,0	1/1:2,21:23:60.19:743,60,0	1/1:0,36:36:99:1264,102,0	1/1:2,10:12:19.13:248,19,0	1/1:0,20:20:54.17:665,54,0	1/1:1,28:29:81.25:1000,81,0	0/1:3,14:17:18.93:340,0,19	0/0:31,0:31:57.22:0,57,788	1/1:0,18:18:48.15:594,48,0	1/1:0,26:26:63.20:780,63,0	1/1:0,22:22:60.19:744,60,0	1/1:0,33:33:99:1214,99,0	1/1:1,28:29:78.25:966,78,0	1/1:0,12:12:30.09:371,30,0
chr10	41457268	.	C	CAACAAA	5297.94	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-9.253;DP=736;FS=6.644;HRun=0;HaplotypeScore=204.1866;InbreedingCoeff=0.9798;MQ=75.94;MQ0=5;MQRankSum=-6.719;QD=67.06;ReadPosRankSum=-0.122;VQSLOD=4.4273;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:30:56.02:0,56,981	0/0:14,0:14:39.07:0,39,760	0/0:35,0:30:80.80:0,81,1126	0/0:36,0:30:90.13:0,90,1617	0/0:43,0:43:93.24:0,93,1775	0/0:32,0:32:90.17:0,90,1761	0/0:24,0:24:72.11:0,72,1294	0/0:37,0:37:86.80:0,87,952	1/1:12,10:22:65.79:1703,66,0	0/0:33,0:33:84.42:0,84,1448	0/0:22,0:22:47.28:0,47,886	0/0:21,0:21:63:0,63,892	1/1:2,18:24:39.01:1372,39,0	0/0:25,0:25:68.79:0,69,1173	0/0:28,0:28:84.14:0,84,1327	0/0:21,0:21:36.94:0,37,938	0/0:39,0:39:99:0,107,1692	0/0:12,0:12:9.11:0,9,381	0/0:19,0:19:50.80:0,51,665	0/0:28,0:28:62.58:0,63,992	0/0:20,0:20:53.77:0,54,739	1/1:2,29:33:84.38:2222,84,0	0/0:19,0:19:53.57:0,54,722	0/0:21,0:21:50.56:0,51,810	0/0:25,0:25:68.85:0,69,1136	0/0:30,0:30:73:0,73,1383	0/0:28,0:28:74.63:0,75,1143	0/0:14,0:14:36.04:0,36,571
chr10	41457964	.	CT	C	1394.57	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.986;DP=621;FS=3.034;HRun=9;HaplotypeScore=58.8591;InbreedingCoeff=0.9897;MQ=74.31;MQ0=0;MQRankSum=-2.500;QD=20.51;ReadPosRankSum=2.211;VQSLOD=4.4490;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:84.25:0,84,969	0/0:11,0:11:27.08:0,27,312	0/0:15,0:15:39.11:0,39,441	0/0:11,0:11:24.04:0,24,257	0/0:23,1:25:69.02:0,69,766	0/0:28,2:30:20.28:0,20,733	0/0:32,0:32:72.67:0,73,822	0/0:25,0:24:51.14:0,51,581	0/0:22,0:22:63.19:0,63,727	0/0:23,0:24:66.03:0,66,742	0/0:21,0:21:60.17:0,60,683	1/1:2,20:22:54.02:494,54,0	0/0:16,1:18:14.49:0,14,402	0/0:28,2:30:50.74:0,51,820	0/0:23,0:23:66.17:0,66,744	0/0:19,0:19:45.13:0,45,519	0/0:21,0:20:60.11:0,60,658	0/0:15,0:15:39.07:0,39,435	0/0:10,0:10:27.07:0,27,304	0/0:34,1:35:68.82:0,69,1045	0/0:24,0:24:69.19:0,69,786	0/0:21,0:21:60.17:0,60,683	1/1:1,20:21:50.86:466,51,0	1/1:0,25:25:63.03:577,63,0	0/0:23,0:23:63.19:0,63,727	0/0:27,0:27:81.24:0,81,930	0/0:33,0:34:96.03:0,96,1028	0/0:8,0:8:24.02:0,24,261
chr10	41458979	.	T	TCA	2325.78	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-7.447;DP=743;FS=0.000;HRun=0;HaplotypeScore=101.8586;InbreedingCoeff=0.9646;MQ=80.96;MQ0=1;MQRankSum=-4.402;QD=32.30;ReadPosRankSum=1.884;VQSLOD=5.3286;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:69.18:0,69,821	0/0:6,0:6:15.05:0,15,186	0/0:31,0:26:32.40:0,32,472	0/0:48,0:46:75.66:0,76,825	0/0:31,0:31:81.25:0,81,1004	0/0:30,0:30:72.21:0,72,871	0/0:31,0:31:74.57:0,75,876	0/0:28,0:28:54.15:0,54,649	1/1:6,16:22:7.95:650,8,0	0/0:37,0:37:99:0,102,1193	0/0:23,0:23:60.16:0,60,720	0/0:31,0:31:72.22:0,72,881	1/1:6,25:31:69.03:1125,69,0	0/0:30,0:31:66.02:0,66,778	0/0:23,0:22:57.14:0,57,671	0/0:33,1:34:47.16:0,47,1091	0/0:33,0:33:81.24:0,81,992	0/0:15,0:15:33.08:0,33,394	0/0:13,0:13:27.08:0,27,335	0/0:24,0:25:63.03:0,63,758	0/0:19,0:19:54.16:0,54,657	1/1:4,15:19:42.14:687,42,0	0/0:22,0:23:60:0,60,697	0/0:29,0:29:66.01:0,66,806	0/0:24,0:25:66.03:0,66,784	0/0:26,0:26:69.20:0,69,834	0/0:42,0:42:99:0,105,1279	0/0:8,0:8:18.06:0,18,223
chr10	41459359	.	AGATCCCCGGTCT	A	5517.18	PASS	AB=0.909;AC=7;AF=0.125;AN=56;BaseQRankSum=11.344;DP=692;FS=2.500;HRun=0;HaplotypeScore=235.5140;InbreedingCoeff=0.8302;MQ=90.23;MQ0=0;MQRankSum=-11.448;QD=66.47;ReadPosRankSum=3.199;VQSLOD=4.4069;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,120,6544	0/0:7,0:7:15.05:0,15,925	0/0:28,0:28:75.26:0,75,3214	0/0:30,0:30:74.64:0,75,3833	0/0:32,0:32:96.33:0,96,5187	0/0:23,0:23:66.23:0,66,3872	0/0:24,0:24:72.21:0,72,3795	0/0:41,0:41:99:0,111,6005	1/1:5,22:27:48.16:1716,48,0	0/0:21,0:21:60.21:0,60,3595	0/0:21,0:21:63.22:0,63,3580	0/0:25,0:25:75.26:0,75,4324	1/1:2,21:23:57.20:2083,57,0	0/0:17,0:17:48.16:0,48,2930	0/0:25,0:25:75.26:0,75,4124	0/1:9,1:10:85.67:86,0,1279	0/0:25,0:25:75.24:0,75,4308	0/0:21,0:21:57.20:0,57,3394	0/0:22,0:22:60.21:0,60,3472	0/0:26,0:26:78.27:0,78,4494	0/0:42,0:42:99:0,117,6681	1/1:3,20:23:45.15:1632,45,0	0/0:24,0:24:72.25:0,72,4147	0/0:29,0:29:87.30:0,87,5297	0/0:26,0:26:78.25:0,78,4523	0/0:22,0:22:66.21:0,66,3708	0/0:29,0:28:84.29:0,84,4988	0/0:6,0:6:18.06:0,18,1103
chr10	41460790	.	AT	A	1791.52	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.677;DP=557;FS=0.498;HRun=6;HaplotypeScore=57.5097;InbreedingCoeff=0.9954;MQ=79.88;MQ0=0;MQRankSum=1.214;QD=28.44;ReadPosRankSum=1.096;VQSLOD=4.1485;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:60.18:0,60,774	0/0:9,0:9:24.08:0,24,316	0/0:22,0:22:48.28:0,48,599	0/0:17,0:17:39.02:0,39,449	0/0:42,0:42:99:0,120,1564	0/0:20,0:20:57.19:0,57,750	0/0:8,0:8:24.08:0,24,316	0/0:32,0:32:84.27:0,84,1105	0/0:22,0:22:54.17:0,54,701	0/0:31,0:31:87.19:0,87,1066	0/0:18,0:18:54.18:0,54,711	1/1:1,16:17:48.12:516,48,0	0/0:14,0:14:42.14:0,42,548	0/0:17,0:17:45.15:0,45,592	0/0:11,0:11:33.11:0,33,434	0/0:20,0:20:57.18:0,57,737	0/0:23,0:23:66.19:0,66,851	0/0:11,0:11:33.11:0,33,434	0/0:21,0:21:54.18:0,54,710	0/0:26,0:26:69.22:0,69,905	0/0:7,0:7:18.06:0,18,237	0/0:16,0:16:48.16:0,48,631	1/1:0,25:25:69.17:742,69,0	1/1:0,21:21:63.16:677,63,0	0/0:26,0:26:63.20:0,63,827	0/0:19,0:19:54.15:0,54,682	0/0:19,0:19:57.18:0,57,747	0/0:17,0:16:45.14:0,45,592
chr10	41460882	.	CGT	C	2593.94	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-5.509;DP=560;FS=3.700;HRun=0;HaplotypeScore=112.4904;InbreedingCoeff=0.8825;MQ=60.19;MQ0=3;MQRankSum=3.489;QD=17.18;ReadPosRankSum=2.490;VQSLOD=3.9531;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:17:18.01:0,18,175	0/0:13,0:13:30.10:0,30,473	0/0:24,0:16:1.32:0,1,334	0/0:21,0:15:21.07:0,21,283	0/0:10,0:31:61.91:0,62,566	0/0:7,0:29:36:0,36,319	0/0:6,0:20:27.01:0,27,264	1/1:10,12:23:29.90:322,30,0	0/0:13,0:15:6:0,6,52	0/0:17,0:19:35.97:0,36,323	0/0:14,0:20:23.21:0,23,189	0/0:16,0:16:33.10:0,33,497	0/0:8,0:8:2.99:0,3,24	0/0:3,0:20:26.83:0,27,236	0/0:10,0:14:17.50:0,17,142	0/0:4,0:18:29.99:0,30,263	0/0:18,0:23:14.88:0,15,114	0/0:10,0:13:21.47:0,21,202	1/1:8,9:17:26.74:285,27,0	1/1:12,19:32:59.81:648,60,0	1/1:6,12:18:32.77:364,33,0	0/0:23,0:24:5.99:0,6,50	0/0:24,0:24:12.87:0,13,665	0/0:21,0:21:54.16:0,54,824	0/0:10,0:18:31.38:0,31,244	1/1:4,13:17:39.10:448,39,0	1/1:8,14:22:35.85:402,36,0	1/1:10,11:21:27.08:318,27,0
chr10	41460935	.	T	TTTTTG	2287.04	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=1.466;DP=535;FS=0.675;HRun=0;HaplotypeScore=140.2673;InbreedingCoeff=0.9622;MQ=63.17;MQ0=1;MQRankSum=-6.858;QD=53.19;ReadPosRankSum=-0.894;VQSLOD=3.9763;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:20:54.17:0,54,1032	0/0:9,0:9:24.08:0,24,464	0/0:23,0:14:15.61:0,16,373	0/0:13,0:10:7.76:0,8,193	0/0:34,0:34:96.25:0,96,1730	0/0:14,0:14:35.79:0,36,656	0/0:20,0:20:42.14:0,42,787	0/0:25,0:25:55.53:0,56,1049	1/1:1,11:14:33.11:921,33,0	0/0:17,0:17:44.88:0,45,360	0/0:27,0:27:69.65:0,70,561	0/0:11,0:11:27.08:0,27,366	1/1:2,9:12:27.56:780,28,0	0/0:23,0:23:60.21:0,60,1149	0/0:10,0:10:20.95:0,21,166	0/0:12,0:12:18.05:0,18,324	0/0:31,0:31:75.21:0,75,1379	0/0:14,0:14:29.87:0,30,228	0/0:12,0:12:30.08:0,30,473	0/0:29,0:29:72.25:0,72,1390	0/0:13,0:13:33.11:0,33,637	1/1:4,13:17:27.08:728,27,0	0/0:31,0:31:78.19:0,78,1044	0/0:19,0:19:45.14:0,45,617	0/0:22,0:22:53.85:0,54,423	0/0:21,0:21:57.19:0,57,1083	0/0:31,0:31:84.07:0,84,1553	0/0:9,0:9:27.09:0,27,536
chr10	41460940	.	G	GT	2130.22	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=7.203;DP=534;FS=0.000;HRun=9;HaplotypeScore=98.7191;InbreedingCoeff=0.6600;MQ=64.16;MQ0=1;MQRankSum=-7.984;QD=15.33;ReadPosRankSum=0.862;VQSLOD=3.6691;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:21:53.95:0,54,464	0/0:9,0:9:23.99:0,24,208	0/0:22,0:13:18.59:0,19,202	0/0:15,0:11:1.10:0,1,66	0/0:31,0:33:85.04:0,85,715	0/0:13,0:13:32.99:0,33,286	0/0:19,0:19:44.89:0,45,378	0/0:22,0:22:53.92:0,54,463	0/1:15,0:15:25.76:83,0,26	1/1:5,12:17:36.10:398,36,0	1/1:6,23:30:37.09:624,37,0	0/0:2,0:10:16.29:0,16,48	0/1:13,0:13:20.95:77,0,21	0/0:23,0:23:59.93:0,60,510	1/1:3,8:11:21.06:232,21,0	0/0:13,0:13:20.99:0,21,182	0/0:33,0:33:80.95:0,81,697	1/1:2,13:15:24.06:265,24,0	0/0:12,0:12:23.96:0,24,203	0/0:28,0:28:80.96:0,81,697	0/0:10,0:11:32.03:0,32,266	0/1:17,0:17:19.50:69,0,19	0/0:3,0:31:48.66:0,49,142	0/0:4,0:19:28.52:0,29,84	1/1:3,18:21:51.14:564,51,0	0/0:20,0:20:56.98:0,57,495	0/0:31,0:31:77.87:0,78,673	0/0:9,0:9:26.99:0,27,234
chr10	41461823	.	A	ATGGTAGAGATCTTGCC	7654.45	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-0.414;DP=526;FS=30.432;HRun=0;HaplotypeScore=218.6201;InbreedingCoeff=0.9955;MQ=81.19;MQ0=0;MQRankSum=-9.761;QD=178.01;ReadPosRankSum=0.226;VQSLOD=3.7051;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:84.24:0,84,3630	0/0:7,0:7:21.07:0,21,891	0/0:14,0:14:39.11:0,39,1249	0/0:15,0:15:36.73:0,37,1017	0/0:17,0:17:48.15:0,48,2034	0/0:23,0:23:66.23:0,66,3041	0/0:27,0:27:81.28:0,81,3369	0/0:22,0:22:60.20:0,60,2379	1/1:11,11:22:63.20:4452,63,0	0/0:19,0:19:50.90:0,51,2016	0/0:15,0:15:39.13:0,39,1685	0/0:23,0:23:69.24:0,69,3127	1/1:7,6:13:36.12:1911,36,0	0/0:18,0:18:51.16:0,51,2255	0/0:24,0:24:69.20:0,69,2746	0/0:23,0:23:69.24:0,69,3013	0/0:19,0:19:57.20:0,57,2345	0/0:13,0:13:39.13:0,39,1579	0/0:21,0:21:54.19:0,54,2326	0/0:18,0:18:54.19:0,54,2112	0/0:31,0:31:90.31:0,90,3985	1/1:4,4:8:21.07:1292,21,0	0/0:18,0:18:54.19:0,54,2503	0/0:19,0:19:51.16:0,51,2125	0/0:13,0:13:39.13:0,39,1758	0/0:22,0:22:63.21:0,63,2568	0/0:25,0:25:75.26:0,75,3016	0/0:7,0:7:21.04:0,21,753
chr10	41461874	.	T	TG	1756.39	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.290;DP=570;FS=11.337;HRun=4;HaplotypeScore=70.4237;InbreedingCoeff=0.9935;MQ=81.12;MQ0=0;MQRankSum=-10.166;QD=29.77;ReadPosRankSum=-1.519;VQSLOD=2.4184;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:90.26:0,90,1020	0/0:9,0:9:24.07:0,24,272	0/0:22,0:22:46.42:0,46,479	0/0:10,0:10:16.37:0,16,143	0/0:17,0:17:45.12:0,45,502	0/0:25,0:25:75.20:0,75,835	0/0:23,0:23:63.16:0,63,704	0/0:32,0:32:87.24:0,87,979	1/1:8,17:25:57.10:751,57,0	0/0:24,0:24:69.18:0,69,769	0/0:17,0:17:51.13:0,51,568	0/0:20,0:20:57.16:0,57,646	1/1:2,14:16:42.14:562,42,0	0/0:22,0:22:60.17:0,60,680	0/0:22,0:22:60.13:0,60,653	0/0:24,0:24:72.17:0,72,796	0/0:19,0:19:51.14:0,51,578	0/0:15,0:15:42.10:0,42,465	0/0:22,0:22:63.15:0,63,690	0/0:21,0:21:63.18:0,63,714	0/0:19,0:19:57.11:0,57,616	1/1:4,14:18:45.06:586,45,0	0/0:14,0:14:33.08:0,33,363	0/0:19,0:19:57.15:0,57,637	0/0:20,0:20:57.15:0,57,636	0/0:20,0:20:51.14:0,51,578	0/0:37,0:37:99:0,108,1216	0/0:7,0:7:21.06:0,21,238
chr10	41461917	.	C	CA	1552.65	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=10.797;DP=574;FS=6.809;HRun=5;HaplotypeScore=64.7013;InbreedingCoeff=0.9982;MQ=77.50;MQ0=0;MQRankSum=-10.402;QD=31.05;ReadPosRankSum=2.153;VQSLOD=4.4106;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:75.17:0,75,798	0/0:10,0:10:30.08:0,30,322	0/0:14,0:14:22.46:0,22,282	0/0:15,0:15:41.92:0,42,404	0/0:26,0:26:75.17:0,75,797	0/0:26,0:26:75.17:0,75,797	0/0:15,0:15:42.10:0,42,451	0/0:34,0:34:96.23:0,96,1025	1/1:2,14:16:39.13:513,39,0	0/0:27,0:27:78.20:0,78,838	0/0:18,0:18:51.13:0,51,548	0/0:17,0:17:45.11:0,45,483	1/1:3,12:15:39.13:512,39,0	0/0:20,0:20:57.14:0,57,612	0/0:21,0:21:54.13:0,54,580	0/0:23,0:23:66.15:0,66,701	0/0:23,0:23:66.17:0,66,709	0/0:20,0:20:48.12:0,48,515	0/0:20,0:20:45.10:0,45,477	0/0:29,0:29:78.20:0,78,838	0/0:12,0:12:36.09:0,36,387	1/1:2,17:19:51.17:670,51,0	0/0:19,0:19:48.12:0,48,516	0/0:13,0:13:36.09:0,36,387	0/0:30,0:30:90.23:0,90,967	0/0:29,0:29:84.18:0,84,883	0/0:28,0:28:69.17:0,69,742	0/0:9,0:9:27.07:0,27,290
chr10	41461959	.	AT	A	1197.83	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.758;DP=573;FS=11.255;HRun=2;HaplotypeScore=60.3854;InbreedingCoeff=0.9940;MQ=82.71;MQ0=0;MQRankSum=-7.139;QD=29.22;ReadPosRankSum=0.161;VQSLOD=1.9298;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:60.19:0,60,878	0/0:12,0:12:36.11:0,36,522	0/0:18,0:18:45.15:0,45,674	0/0:15,0:15:39.03:0,39,546	0/0:31,0:31:90.29:0,90,1311	0/0:25,0:25:75.25:0,75,1115	0/0:14,0:14:42.12:0,42,607	0/0:29,0:29:84.27:0,84,1224	1/1:1,13:14:39.13:501,39,0	0/0:31,0:31:87.28:0,87,1271	0/0:21,0:21:63.20:0,63,926	0/0:20,0:20:57.18:0,57,831	1/1:1,11:12:30.10:384,30,0	0/0:21,0:21:63.21:0,63,942	0/0:22,0:22:66.21:0,66,969	0/0:19,0:19:57.18:0,57,834	0/0:30,0:30:87.26:0,87,1254	0/0:20,0:20:60.15:0,60,852	0/0:17,0:17:45.14:0,45,656	0/0:30,0:30:90.29:0,90,1328	0/0:13,0:13:39.13:0,39,584	1/1:3,12:15:36.11:456,36,0	0/0:23,0:23:69.23:0,69,1032	0/0:14,0:14:42.13:0,42,605	0/0:25,0:25:72.23:0,72,1059	0/0:29,0:29:87.29:0,87,1304	0/0:28,0:28:84.27:0,84,1234	0/0:5,0:5:15.05:0,15,225
chr10	41462074	.	TC	T	2407.40	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=11.063;DP=640;FS=10.879;HRun=1;HaplotypeScore=60.0880;InbreedingCoeff=0.9942;MQ=82.70;MQ0=0;MQRankSum=-2.572;QD=36.48;ReadPosRankSum=1.961;VQSLOD=3.2996;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:69.21:0,69,1078	0/0:13,0:13:39.13:0,39,623	0/0:20,0:20:31.51:0,32,817	0/0:18,0:18:44.76:0,45,657	0/0:34,0:34:99:0,99,1580	0/0:24,0:24:72.25:0,72,1148	0/0:17,0:17:51.11:0,51,772	0/0:27,0:27:78.26:0,78,1226	1/1:0,24:24:63.21:880,63,0	0/0:26,0:26:78.27:0,78,1246	0/0:20,0:20:60.20:0,60,959	0/0:18,0:18:51.17:0,51,815	1/1:0,28:28:81.27:1127,81,0	0/0:21,0:21:63.21:0,63,1005	0/0:30,0:30:90.29:0,90,1413	0/0:20,0:20:60.20:0,60,959	0/0:41,0:41:99:0,117,1824	0/0:20,0:20:57.11:0,57,833	0/0:29,0:29:87.29:0,87,1362	0/0:21,0:21:63.20:0,63,984	0/0:18,0:18:54.18:0,54,861	1/1:0,14:14:42.05:543,42,0	0/0:19,0:19:57.18:0,57,887	0/0:18,0:18:54.18:0,54,860	0/0:20,0:20:60.19:0,60,935	0/0:35,0:35:99:0,105,1655	0/0:36,0:36:99:0,108,1652	0/0:6,0:6:15.05:0,15,240
chr10	41462902	.	C	CTCTATCTA	4587.86	PASS	AB=1.000;AC=34;AF=0.654;AN=52;BaseQRankSum=-0.210;DP=747;FS=2.835;HRun=0;HaplotypeScore=248.6836;InbreedingCoeff=0.7350;MQ=58.54;MQ0=12;MQRankSum=-3.319;QD=9.52;ReadPosRankSum=0.980;VQSLOD=3.8774;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:32:35.01:304,35,0	0/0:2,0:11:18.06:0,18,317	./.	./.	1/1:18,0:39:53.40:439,53,0	1/1:14,14:32:18.06:655,18,0	1/1:15,0:15:3.01:86,3,0	1/1:35,0:35:11.99:139,12,0	0/0:28,0:28:51.14:0,51,1123	1/1:37,0:37:46.04:630,46,0	1/1:33,0:32:17.83:217,18,0	1/1:17,0:17:10.57:101,11,0	0/0:32,0:32:42.13:0,42,833	1/1:3,0:20:38.51:302,39,0	1/1:19,0:19:18.03:258,18,0	1/1:8,10:19:12.04:420,12,0	1/1:16,0:17:9.76:111,10,0	1/1:19,0:19:14.94:143,15,0	0/0:24,0:23:21.03:0,21,322	0/0:38,0:38:10.70:0,11,497	0/0:24,0:24:35.98:0,36,572	0/0:30,0:30:42.13:0,42,877	1/1:33,0:33:12.04:201,12,0	1/1:19,0:19:3.90:48,4,0	1/1:26,0:26:22.32:414,22,0	0/1:39,0:39:83.75:84,0,634	0/1:31,0:30:35.52:36,0,675	0/0:18,0:18:15.41:0,15,337
chr10	41462941	.	TATC	T	6036.87	PASS	AB=0.983;AC=22;AF=0.393;AN=56;BaseQRankSum=1.414;DP=680;FS=6.992;HRun=0;HaplotypeScore=173.4375;InbreedingCoeff=0.3781;MQ=54.50;MQ0=4;MQRankSum=-1.516;QD=17.25;ReadPosRankSum=2.196;VQSLOD=4.3614;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,1:31:6.01:0,6,720	0/1:10,0:10:16.53:17,0,28	0/0:20,0:16:48.16:0,48,651	0/0:9,0:5:14.71:0,15,165	0/0:30,0:30:68.73:0,69,1005	0/0:25,0:25:24.26:0,24,524	0/1:16,3:19:10.65:11,0,490	1/1:32,0:32:89.59:1257,90,0	0/0:27,0:27:78.23:0,78,1472	0/1:41,0:41:21.40:21,0,1148	0/0:31,0:30:5.93:0,6,420	0/0:15,0:15:21.37:0,21,423	0/0:27,0:27:78.25:0,78,1324	0/0:26,0:26:63.21:0,63,963	0/1:22,0:22:21.90:22,0,576	0/1:21,0:21:32.43:32,0,446	0/1:14,0:14:40.87:41,0,91	0/1:15,0:15:80.06:80,0,309	1/1:2,15:16:30.38:697,30,0	1/1:1,30:31:42.14:699,42,0	1/1:2,26:28:18.24:575,18,0	0/0:31,0:31:66.22:0,66,1287	0/0:30,0:30:47.86:0,48,772	0/1:18,0:18:24.66:25,0,294	0/0:28,0:28:49.64:0,50,859	1/1:3,27:30:43.56:1240,44,0	1/1:1,34:35:57.08:924,57,0	1/1:2,15:17:24.08:396,24,0
chr10	41462944	.	C	CT	3730.11	PASS	AB=0.798;AC=23;AF=0.411;AN=56;BaseQRankSum=6.438;DP=676;FS=8.542;HRun=1;HaplotypeScore=162.0613;InbreedingCoeff=0.3202;MQ=56.36;MQ0=3;MQRankSum=0.215;QD=9.26;ReadPosRankSum=1.994;VQSLOD=0.9751;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:27,2:29:29.57:30,0,347	0/0:10,0:10:20.94:0,21,179	0/0:20,0:18:54.17:0,54,720	0/0:8,0:5:14.71:0,15,165	0/1:31,0:31:9.01:9,0,157	0/0:26,0:26:22.12:0,22,423	0/0:19,0:19:33.06:0,33,532	1/1:1,33:34:96.27:1378,96,0	0/0:27,0:27:78.23:0,78,1056	0/1:27,13:40:99:452,0,880	0/1:17,12:28:99:129,0,315	0/1:12,4:16:65.94:66,0,291	0/0:28,0:28:78.25:0,78,1072	0/0:26,0:26:10.30:0,10,316	0/1:15,7:22:49.90:50,0,425	0/0:21,0:21:18.42:0,18,402	0/1:10,4:14:36.16:36,0,89	0/1:7,7:14:99:146,0,257	1/1:17,0:17:17.11:394,17,0	1/1:32,0:32:23.80:68,24,0	1/1:27,1:28:23.12:139,23,0	0/0:29,0:29:66.22:0,66,923	0/0:24,7:31:48.77:0,49,630	0/1:13,5:18:65.26:65,0,302	0/0:24,4:28:9:0,9,664	1/1:29,0:29:20.50:549,20,0	1/1:35,0:34:33.95:145,34,0	1/1:15,0:15:13.89:75,14,0
chr10	41463062	.	TAATC	T	5516.46	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=11.979;DP=625;FS=2.376;HRun=0;HaplotypeScore=103.3355;InbreedingCoeff=0.9854;MQ=71.46;MQ0=3;MQRankSum=-2.384;QD=28.29;ReadPosRankSum=3.433;VQSLOD=4.9873;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:60.14:0,60,1290	0/0:4,0:4:9.03:0,9,221	0/0:26,0:23:42.14:0,42,847	0/0:28,0:27:60.10:0,60,1134	0/0:27,0:27:54.19:0,54,1316	0/0:26,0:26:54.15:0,54,1251	0/0:17,0:17:39.09:0,39,855	0/0:35,0:35:60.16:0,60,1338	1/1:8,16:23:30.10:495,30,0	1/1:12,28:39:84.29:1364,84,0	1/1:5,15:20:27.09:446,27,0	0/0:17,0:17:33.11:0,33,789	1/1:10,17:26:48.16:781,48,0	0/0:20,0:20:45.15:0,45,1035	1/1:8,14:20:30.10:495,30,0	0/0:19,0:19:45.15:0,45,1037	1/1:4,11:15:36.12:598,36,0	1/1:3,4:7:15.05:248,15,0	0/0:20,0:20:48.16:0,48,1112	0/0:29,0:29:72.25:0,72,1699	0/0:18,0:18:33.11:0,33,799	1/1:5,16:21:30.10:495,30,0	0/0:21,0:21:45.15:0,45,1071	0/0:27,0:27:63.21:0,63,1430	1/1:3,16:19:36.12:594,36,0	0/0:26,0:25:57.20:0,57,1397	0/0:34,0:34:81.24:0,81,1817	0/0:8,0:8:15.05:0,15,368
chr10	41463226	.	AG	A	8596.88	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=5.605;DP=418;FS=4.723;HRun=4;HaplotypeScore=61.9669;InbreedingCoeff=0.9780;MQ=78.97;MQ0=11;MQRankSum=-4.566;QD=29.14;ReadPosRankSum=2.098;VQSLOD=5.0843;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,13:12:33.10:383,33,0	0/0:10,0:10:27.09:0,27,378	0/0:44,0:24:41:0,41,701	0/0:44,0:22:52.89:0,53,546	1/1:1,18:19:51.15:607,51,0	0/0:13,0:13:36.12:0,36,502	0/0:12,0:12:33.11:0,33,454	1/1:0,27:27:81.22:949,81,0	1/1:1,10:11:24.07:285,24,0	1/1:0,11:11:33.10:396,33,0	1/1:0,10:10:30.08:344,30,0	1/1:2,9:11:21.54:252,22,0	1/1:2,5:6:18.05:214,18,0	1/1:1,9:10:18.06:216,18,0	1/1:1,11:12:30.09:357,30,0	1/1:1,12:12:27.08:324,27,0	1/1:0,14:13:36.11:430,36,0	1/1:0,11:10:21.06:252,21,0	1/1:1,8:8:24.03:270,24,0	1/1:2,14:16:36.11:431,36,0	1/1:2,13:15:27.03:320,27,0	1/1:0,10:10:27.08:321,27,0	1/1:1,20:21:60.18:702,60,0	1/1:0,15:15:24.07:276,24,0	1/1:1,9:10:27.08:317,27,0	1/1:0,12:12:33.05:373,33,0	1/1:0,14:13:39.12:468,39,0	1/1:1,3:4:9.03:108,9,0
chr10	41463233	.	TTCTCTCTCTCTCTCTCTC	T	483.09	PASS	AC=4;AF=0.077;AN=52;BaseQRankSum=2.899;DP=480;FS=4.473;HRun=0;HaplotypeScore=221.0396;InbreedingCoeff=0.4691;MQ=68.59;MQ0=17;MQRankSum=-1.332;QD=17.25;ReadPosRankSum=0.914;VQSLOD=2.1910;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:23:16.30:0,16,966	0/0:13,0:13:9.03:0,9,424	0/0:41,0:21:1.87:0,2,4	0/0:39,0:17:8.88:0,9,110	0/0:18,0:19:15.05:0,15,508	0/0:16,0:16:18.05:0,18,1108	0/0:14,0:13:9.03:0,9,463	0/0:29,0:29:12.04:0,12,498	0/0:17,0:14:15.42:0,15,726	0/0:16,0:16:21.06:0,21,1287	0/0:16,0:14:6.02:0,6,430	1/1:6,2:8:6.02:291,6,0	0/0:11,0:9:6.02:0,6,359	0/0:6,0:8:6.02:0,6,231	0/0:15,0:15:11.93:0,12,630	0/0:13,0:12:14.88:0,15,982	0/0:15,0:14:6.02:0,6,124	0/0:15,0:13:15.05:0,15,1022	0/0:9,0:9:9.03:0,9,401	0/0:16,0:17:14.83:0,15,661	0/0:18,0:17:8.86:0,9,533	0/0:22,0:20:2.80:0,3,219	1/1:18,2:20:6.01:290,6,0	./.	0/0:11,0:10:2.89:0,3,25	0/0:14,0:15:20.10:0,20,1029	0/0:17,0:16:27.07:0,27,1273	./.
chr10	41463367	.	CCCT	C	1941.87	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=3.234;DP=288;FS=5.128;HRun=0;HaplotypeScore=51.8950;InbreedingCoeff=0.7033;MQ=49.91;MQ0=11;MQRankSum=1.443;QD=15.29;ReadPosRankSum=1.775;VQSLOD=2.6647;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,11:14:24.08:409,24,0	0/0:3,0:3:9.03:0,9,194	0/0:10,0:1:3:0,3,26	0/0:10,0:2:4.83:0,5,69	1/1:5,9:13:27.09:460,27,0	0/0:11,0:11:30.10:0,30,630	0/0:7,0:7:15.05:0,15,327	1/1:5,0:5:9.44:47,9,0	0/0:11,0:11:30.10:0,30,658	0/1:10,0:10:6.64:7,0,72	0/0:8,0:8:18.06:0,18,59	0/0:22,0:21:60.21:0,60,1315	0/0:13,0:13:30.10:0,30,661	1/1:0,12:12:21.07:350,21,0	0/0:12,0:11:12.31:0,12,59	1/1:1,13:12:33.11:562,33,0	0/1:8,0:8:14.20:32,0,14	0/0:10,0:10:16.43:0,16,54	1/1:6,0:5:13.56:76,14,0	1/1:10,0:9:12.88:48,13,0	1/1:4,0:4:2.60:10,3,0	0/0:13,0:13:30.10:0,30,642	0/0:20,0:20:57.18:0,57,1182	0/0:10,0:10:27.09:0,27,595	0/1:12,0:12:0.41:0,0,13	1/1:5,0:5:12.88:48,13,0	1/1:12,0:12:23.45:91,23,0	0/0:1,0:1:0.89:0,1,2
chr10	41463368	.	CCT	C	2437.59	PASS	AB=0.767;AC=32;AF=0.571;AN=56;BaseQRankSum=8.099;DP=289;FS=9.936;HRun=0;HaplotypeScore=45.6319;InbreedingCoeff=0.8087;MQ=50.11;MQ0=11;MQRankSum=1.616;QD=15.43;ReadPosRankSum=1.214;VQSLOD=2.2765;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:14:23.86:177,24,0	0/0:3,0:3:9.03:0,9,155	0/0:10,0:1:2.99:0,3,24	0/0:11,0:3:8.91:0,9,92	1/1:13,2:14:29.86:227,30,0	0/0:12,0:12:33.10:0,33,546	0/0:7,0:7:18.05:0,18,293	1/1:3,2:5:14.98:161,15,0	0/0:11,0:11:30.10:0,30,536	0/1:10,0:10:1.08:91,0,1	1/1:8,0:8:17.76:57,18,0	0/0:22,0:21:60.21:0,60,1073	0/0:13,0:13:30.10:0,30,539	1/1:12,0:12:20.86:153,21,0	1/1:12,0:11:19.80:98,20,0	1/1:13,1:12:32.81:244,33,0	0/1:1,7:8:0.51:211,0,1	1/1:10,0:10:16.91:53,17,0	1/1:2,4:5:15.02:184,15,0	1/1:1,9:9:15.05:229,15,0	1/1:0,3:3:3.01:46,3,0	0/0:12,0:12:30.10:0,30,520	0/0:20,0:20:57.10:0,57,954	0/0:10,0:10:27.09:0,27,484	1/1:11,1:12:9.67:68,10,0	1/1:1,4:5:15.05:229,15,0	1/1:1,11:12:26.93:413,27,0	1/1:1,0:1:1.25:3,1,0
chr10	41463369	.	CT	C	2508.44	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=7.469;DP=286;FS=10.032;HRun=1;HaplotypeScore=41.0162;InbreedingCoeff=0.8659;MQ=50.26;MQ0=10;MQRankSum=2.479;QD=16.18;ReadPosRankSum=1.275;VQSLOD=2.6038;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,1:13:23.22:129,23,0	0/0:3,0:3:9.03:0,9,119	0/0:9,0:1:2.60:0,3,10	0/0:11,0:3:8.80:0,9,76	1/1:15,0:14:29.12:171,29,0	0/0:12,0:12:33.08:0,33,432	0/0:6,0:6:18.05:0,18,237	1/1:4,1:5:14.86:107,15,0	0/0:11,0:11:30.10:0,30,424	1/1:4,6:10:27.55:343,28,0	1/1:0,8:8:24.08:334,24,0	0/0:22,0:21:60.20:0,60,850	0/0:13,0:13:30.10:0,30,428	1/1:12,0:12:20.37:116,20,0	1/1:4,8:11:27.06:346,27,0	1/1:14,0:12:31.93:178,32,0	1/1:8,0:8:2.38:77,2,0	1/1:6,4:10:23.11:297,23,0	1/1:5,1:5:14.87:109,15,0	1/1:9,1:9:14.72:92,15,0	1/1:3,0:3:2.94:18,3,0	0/0:12,0:12:30.08:0,30,399	0/0:21,0:21:60.09:0,60,791	0/0:10,0:10:27.09:0,27,385	1/1:1,10:11:11.97:144,12,0	1/1:4,1:5:14.72:92,15,0	1/1:11,1:12:26.11:166,26,0	0/0:1,0:1:1.25:0,1,3
chr10	41464309	.	A	ATT	2829.17	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=10.570;DP=632;FS=0.569;HRun=0;HaplotypeScore=79.8738;InbreedingCoeff=0.9999;MQ=91.25;MQ0=0;MQRankSum=-3.223;QD=50.52;ReadPosRankSum=0.824;VQSLOD=4.5989;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:87.30:0,87,1419	0/0:16,0:16:48.16:0,48,783	0/0:35,0:35:99:0,102,1645	0/0:17,0:17:51.17:0,51,813	0/0:28,0:28:78.25:0,78,1244	0/0:23,0:23:69.24:0,69,1126	0/0:15,0:15:42.14:0,42,685	0/0:21,0:21:63.21:0,63,1006	0/0:19,0:19:57.19:0,57,930	0/0:21,0:21:60.20:0,60,979	0/0:13,0:13:35.69:0,36,559	1/1:0,22:24:60.21:1211,60,0	0/0:26,0:26:78.24:0,78,1222	0/0:28,0:28:84.29:0,84,1360	0/0:31,0:31:93.32:0,93,1518	0/0:22,0:22:66.23:0,66,1077	0/0:23,0:23:66.23:0,66,1076	0/0:22,0:22:63.20:0,63,991	0/0:18,0:18:51.17:0,51,810	0/0:21,0:21:54.08:0,54,854	0/0:30,0:30:87.26:0,87,1369	0/0:23,0:23:60.20:0,60,978	1/1:0,13:13:39.13:767,39,0	1/1:0,19:19:51.13:995,51,0	0/0:33,0:32:87.30:0,87,1415	0/0:19,0:19:54.18:0,54,879	0/0:28,0:27:84.27:0,84,1344	0/0:12,0:12:36.12:0,36,587
chr10	41465168	.	G	GC	2375.45	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=12.516;DP=672;FS=5.184;HRun=0;HaplotypeScore=70.4943;InbreedingCoeff=1.0000;MQ=85.77;MQ0=0;MQRankSum=-6.014;QD=33.46;ReadPosRankSum=0.069;VQSLOD=2.9716;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,114,1574	0/0:14,0:14:42.14:0,42,587	0/0:25,0:24:72.15:0,72,960	0/0:20,0:20:53.96:0,54,711	0/0:21,0:21:63.21:0,63,879	0/0:22,0:22:66.22:0,66,922	0/0:28,0:28:78.24:0,78,1072	0/0:34,0:34:93.30:0,93,1284	1/1:1,21:22:66.20:825,66,0	0/0:30,0:30:90.29:0,90,1223	0/0:23,0:23:63.21:0,63,879	0/0:24,0:24:69.22:0,69,946	1/1:3,20:24:66.20:820,66,0	0/0:24,0:24:69.21:0,69,946	0/0:31,0:31:90.29:0,90,1240	0/0:26,0:26:75.25:0,75,1043	0/0:20,0:20:60.20:0,60,839	0/0:15,0:15:45.15:0,45,626	0/0:20,0:20:57.19:0,57,796	0/0:28,0:28:84.26:0,84,1154	0/0:19,0:19:54.18:0,54,755	1/1:1,24:25:72.21:874,72,0	0/0:23,0:23:69.22:0,69,950	0/0:20,0:20:60.20:0,60,839	0/0:24,0:24:72.22:0,72,988	0/0:29,0:29:87.29:0,87,1216	0/0:24,0:24:69.21:0,69,940	0/0:17,0:17:51.15:0,51,693
chr10	41465169	.	T	TA	1937.82	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=13.141;DP=677;FS=4.345;HRun=2;HaplotypeScore=73.6398;InbreedingCoeff=1.0000;MQ=86.58;MQ0=0;MQRankSum=-3.672;QD=26.19;ReadPosRankSum=-0.214;VQSLOD=3.2326;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,114,1382	0/0:15,0:15:42.13:0,42,520	0/0:25,0:24:71.88:0,72,847	0/0:22,0:22:45.11:0,45,542	0/0:22,0:22:63.20:0,63,781	0/0:22,0:22:66.21:0,66,818	0/0:28,0:28:84.23:0,84,1014	0/0:32,0:32:90.27:0,90,1095	1/1:2,21:23:65.83:692,66,0	0/0:29,0:29:84.26:0,84,1041	0/0:24,0:24:63.19:0,63,769	0/0:23,0:23:60.19:0,60,744	1/1:7,19:26:65.24:652,65,0	0/0:25,0:25:72.21:0,72,880	0/0:31,0:31:84.26:0,84,1041	0/0:27,0:27:78.20:0,78,950	0/0:20,0:20:60.19:0,60,744	0/0:15,0:15:42.13:0,42,521	0/0:21,0:21:54.15:0,54,648	0/0:28,0:28:81.25:0,81,1004	0/0:18,0:18:54.15:0,54,655	1/1:1,24:25:71.94:736,72,0	0/0:23,0:23:69.22:0,69,855	0/0:21,0:21:60.19:0,60,744	0/0:24,0:24:72.23:0,72,892	0/0:29,0:29:81.25:0,81,1004	0/0:23,0:23:60.17:0,60,731	0/0:17,0:17:51.16:0,51,631
chr10	41465381	.	TTCTCTCTCTCTCTCTC	T	1000.03	PASS	AB=0.839;AC=11;AF=0.212;AN=52;BaseQRankSum=4.065;DP=639;FS=6.632;HRun=0;HaplotypeScore=233.5012;InbreedingCoeff=0.6400;MQ=65.00;MQ0=20;MQRankSum=-2.625;QD=9.62;ReadPosRankSum=0.428;VQSLOD=1.7389;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:32:30.08:0,30,1402	0/0:14,0:14:9.03:0,9,454	./.	./.	0/0:18,0:18:0:0,0,0	0/0:25,0:27:14.08:0,14,509	0/0:31,0:31:36.59:0,37,1670	0/0:30,0:30:12.50:0,13,196	0/0:16,0:18:16.78:0,17,234	1/1:17,0:18:12.04:290,12,0	1/1:13,3:16:3.01:131,3,0	0/0:19,0:18:27.09:0,27,938	0/0:12,0:12:12.03:0,12,142	0/0:19,0:21:18.04:0,18,661	1/1:9,5:15:9.03:296,9,0	0/0:22,0:25:24.55:0,25,807	0/0:18,0:21:18.93:0,19,378	1/1:5,4:7:3.01:131,3,0	0/0:29,0:28:17.23:0,17,589	0/0:18,0:22:7.27:0,7,257	0/0:32,0:32:39.13:0,39,2086	1/1:17,0:19:6.01:104,6,0	0/0:12,0:12:9.03:0,9,306	0/0:19,0:26:24.55:0,25,1000	0/1:21,4:24:28.17:194,0,28	0/0:23,0:23:6.02:0,6,296	0/0:23,0:24:20.10:0,20,908	0/0:15,0:13:9.03:0,9,271
chr10	41466223	.	AC	A	2479.34	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=13.111;DP=743;FS=0.945;HRun=3;HaplotypeScore=77.7976;InbreedingCoeff=0.9976;MQ=65.38;MQ0=0;MQRankSum=1.654;QD=32.20;ReadPosRankSum=1.836;VQSLOD=4.0370;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,102,1407	0/0:7,0:7:21.07:0,21,301	0/0:20,0:19:43.33:0,43,745	0/0:21,0:21:54.18:0,54,764	0/0:27,0:27:75.23:0,75,1057	0/0:22,0:22:66.20:0,66,930	0/0:22,0:22:66.22:0,66,946	0/0:49,0:49:99:0,144,2003	1/1:1,27:28:72.23:892,72,0	0/0:31,0:31:90.29:0,90,1280	0/0:13,0:13:39.09:0,39,506	0/0:20,0:20:60.20:0,60,863	1/1:0,19:19:51.16:632,51,0	0/0:19,0:19:54.18:0,54,776	0/0:33,0:33:90.30:0,90,1296	0/0:19,1:20:23:0,23,782	0/0:36,0:36:96.32:0,96,1370	0/0:21,0:21:63.17:0,63,883	0/0:30,0:30:75.23:0,75,1043	0/0:40,0:40:99:0,117,1641	0/0:15,0:15:45.13:0,45,628	1/1:0,30:30:90.24:1098,90,0	0/0:29,0:29:81.26:0,81,1146	0/0:42,0:41:99:0,117,1661	0/0:15,0:15:45.13:0,45,629	0/0:39,0:39:99:0,117,1668	0/0:48,0:48:99:0,144,2028	0/0:13,0:13:39.13:0,39,561
chr10	41466279	.	A	ATGTC	2686.36	PASS	AB=0.633;AC=5;AF=0.089;AN=56;BaseQRankSum=-6.292;DP=791;FS=8.224;HRun=0;HaplotypeScore=139.7869;InbreedingCoeff=0.7424;MQ=69.71;MQ0=1;MQRankSum=-1.248;QD=27.41;ReadPosRankSum=-1.040;VQSLOD=3.1040;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:75.24:0,75,1141	0/0:12,0:12:30.08:0,30,440	0/0:32,0:24:2.24:0,2,41	0/0:38,0:32:2.88:0,3,44	0/1:16,22:37:1.58:913,0,2	0/0:18,0:18:18.04:0,18,253	0/0:27,0:27:36.12:0,36,556	0/0:45,0:45:10.28:0,10,176	0/0:31,0:31:54.17:0,54,816	0/0:31,0:33:54.17:0,54,800	0/0:24,0:24:42.14:0,42,635	0/0:21,0:21:33.11:0,33,514	0/0:20,0:20:39.13:0,39,604	1/1:8,15:23:39.13:910,39,0	0/0:22,0:23:33.11:0,33,494	0/0:26,0:26:48.16:0,48,744	1/1:18,18:37:45.14:993,45,0	0/0:22,0:22:16.65:0,17,485	0/0:22,0:23:33.11:0,33,495	0/0:35,0:35:42.14:0,42,650	0/0:21,0:21:33.10:0,33,492	0/0:35,0:35:47.90:0,48,736	0/0:33,0:33:51.16:0,51,760	0/0:36,0:35:69.23:0,69,1073	0/0:17,0:16:36.11:0,36,539	0/0:35,0:35:51.17:0,51,786	0/0:36,0:36:60.20:0,60,907	0/0:15,0:15:33.11:0,33,507
chr10	41466490	.	T	TG	1922	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.169;DP=658;FS=0.000;HRun=5;HaplotypeScore=67.0064;InbreedingCoeff=0.9970;MQ=86.57;MQ0=0;MQRankSum=-1.655;QD=29.57;ReadPosRankSum=0.359;VQSLOD=4.0247;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:96.12:0,96,996	0/0:11,0:11:33.08:0,33,355	0/0:25,0:24:59.36:0,59,616	0/0:21,0:21:41.88:0,42,411	0/0:33,0:33:90.22:0,90,967	0/0:24,0:24:69.11:0,69,720	0/0:31,0:31:93.23:0,93,999	0/0:39,0:39:99:0,111,1182	1/1:2,14:16:36.12:473,36,0	0/0:25,0:25:66.16:0,66,704	0/0:20,0:20:60.14:0,60,637	0/0:17,0:17:48.12:0,48,516	1/1:3,16:20:51.16:656,51,0	0/0:27,0:27:72.11:0,72,746	0/0:19,0:19:54.11:0,54,566	0/0:17,0:17:45.11:0,45,484	0/0:33,0:33:87.17:0,87,915	0/0:14,0:14:42.11:0,42,451	0/0:22,0:22:57.06:0,57,573	0/0:26,0:26:78.18:0,78,826	0/0:23,0:23:69.16:0,69,734	1/1:3,25:29:75.09:936,75,0	0/0:26,0:26:72.16:0,72,765	0/0:31,0:31:90.21:0,90,958	0/0:20,0:20:57.14:0,57,613	0/0:20,0:20:54.14:0,54,580	0/0:26,0:26:63.15:0,63,677	0/0:6,0:6:18.05:0,18,193
chr10	41466812	.	TC	T	1999.44	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.767;DP=605;FS=1.734;HRun=2;HaplotypeScore=62.2216;InbreedingCoeff=0.9794;MQ=90.10;MQ0=0;MQRankSum=-1.331;QD=35.70;ReadPosRankSum=3.090;VQSLOD=4.2070;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,114,1685	0/0:10,0:10:30.10:0,30,449	0/0:31,0:31:84.14:0,84,1183	0/0:21,0:21:51.14:0,51,706	0/0:21,0:21:63.21:0,63,940	0/0:16,0:16:48.16:0,48,719	0/0:25,0:25:75.25:0,75,1118	0/0:35,0:35:99:0,102,1493	1/1:0,22:22:66.21:857,66,0	0/0:22,0:22:63.21:0,63,940	0/0:21,0:21:63.19:0,63,920	0/0:24,0:24:72.24:0,72,1079	1/1:0,16:16:45.15:585,45,0	0/0:15,0:15:45.15:0,45,673	0/0:22,0:22:66.22:0,66,970	0/0:13,0:13:39.13:0,39,580	0/0:30,0:30:90.30:0,90,1341	0/0:16,0:16:45.14:0,45,650	0/0:22,0:22:66.22:0,66,988	0/0:21,0:21:60.20:0,60,899	0/0:20,0:20:57.18:0,57,830	1/1:0,18:18:54.18:701,54,0	0/0:17,0:17:51.15:0,51,719	0/0:31,0:31:93.32:0,93,1393	0/0:27,0:27:78.26:0,78,1157	0/0:21,0:21:60.20:0,60,899	0/0:25,0:25:75.19:0,75,1058	0/0:3,0:3:9.03:0,9,135
chr10	41466991	.	TA	T	3628.05	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=12.738;DP=717;FS=5.165;HRun=1;HaplotypeScore=84.1903;InbreedingCoeff=0.9943;MQ=89.95;MQ0=0;MQRankSum=-2.897;QD=38.60;ReadPosRankSum=1.379;VQSLOD=4.2788;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,135,2102	0/0:14,0:14:42.14:0,42,671	0/0:25,0:25:75.25:0,75,1178	0/0:29,0:29:63.58:0,64,1171	0/0:21,0:21:60.20:0,60,957	0/0:11,0:11:33.10:0,33,505	0/0:33,0:33:99:0,99,1538	0/0:23,0:23:66.22:0,66,1031	1/1:0,30:30:78.26:1091,78,0	0/0:34,0:34:99:0,99,1561	0/0:18,0:18:54.17:0,54,839	0/0:30,0:30:87.28:0,87,1365	1/1:0,40:40:99:1636,117,0	0/0:27,0:27:81.28:0,81,1295	0/0:27,0:27:75.26:0,75,1199	0/0:23,0:23:69.22:0,69,1079	0/0:29,0:29:87.30:0,87,1385	0/0:28,0:28:78.21:0,78,1191	0/0:18,0:18:54.12:0,54,787	0/0:23,0:23:69.24:0,69,1099	0/0:37,0:37:99:0,111,1726	1/1:0,24:24:66.18:901,66,0	0/0:24,0:24:72.25:0,72,1141	0/0:27,0:27:78.27:0,78,1247	0/0:26,0:26:74.87:0,75,1199	0/0:18,0:18:51.17:0,51,814	0/0:27,0:27:81.25:0,81,1266	0/0:5,0:5:15.05:0,15,238
chr10	41467354	.	G	GGTCAAATATGAATGAGTA	19266.76	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-5.538;DP=758;FS=11.244;HRun=0;HaplotypeScore=386.6057;InbreedingCoeff=0.9996;MQ=80.13;MQ0=0;MQRankSum=-15.197;QD=187.06;ReadPosRankSum=-0.768;VQSLOD=3.7693;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,126,5899	0/0:13,0:13:33.10:0,33,1363	0/0:27,0:27:74.98:0,75,2683	0/0:15,0:15:33.88:0,34,1345	0/0:28,0:28:81.28:0,81,3731	0/0:20,0:19:60.21:0,60,2704	0/0:26,0:26:75.22:0,75,3282	0/0:29,0:29:84.29:0,84,3659	1/1:23,11:34:96.33:6571,96,0	0/0:24,0:24:66.23:0,66,3116	0/0:25,0:25:69.24:0,69,3356	0/0:39,0:39:99:0,114,5077	1/1:31,13:46:99:8539,120,0	0/0:25,0:25:72.25:0,72,3239	0/0:27,0:27:81.28:0,81,3748	0/0:27,0:27:78.27:0,78,3374	0/0:31,0:31:93.32:0,93,4589	0/0:16,0:16:48.16:0,48,2340	0/0:24,0:24:72.25:0,72,3569	0/0:30,0:30:87.30:0,87,4348	0/0:17,0:17:45.15:0,45,2001	1/1:17,5:23:60.21:4156,60,0	0/0:25,0:25:66.23:0,66,3183	0/0:37,0:37:99:0,111,5171	0/0:26,0:26:78.27:0,78,3736	0/0:37,0:37:99:0,99,4621	0/0:34,0:34:99:0,99,4774	0/0:10,0:10:30.10:0,30,1342
chr10	41467885	.	GA	G	2416.84	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=12.822;DP=727;FS=0.000;HRun=2;HaplotypeScore=77.9637;InbreedingCoeff=0.9985;MQ=87.38;MQ0=0;MQRankSum=-3.217;QD=30.59;ReadPosRankSum=1.712;VQSLOD=3.2480;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,111,1623	0/0:13,0:13:36.12:0,36,532	0/0:27,0:27:75.13:0,75,1015	0/0:29,0:29:83.31:0,83,1172	0/0:23,0:23:63.21:0,63,932	0/0:22,0:22:66.14:0,66,912	0/0:32,0:32:90.30:0,90,1314	0/0:37,0:37:99:0,108,1565	1/1:0,26:26:63.20:815,63,0	0/0:23,0:23:69.21:0,69,983	0/0:18,0:18:54.18:0,54,799	0/0:25,0:25:69.16:0,69,975	1/1:0,21:21:57.08:698,57,0	0/0:20,0:20:60.20:0,60,884	0/0:24,0:24:69.12:0,69,970	0/0:35,0:35:99:0,102,1416	0/0:22,0:22:66.22:0,66,975	0/0:14,0:14:42.14:0,42,621	0/0:25,0:25:69.23:0,69,1005	0/0:33,0:33:99:0,99,1440	0/0:28,0:28:84.28:0,84,1242	1/1:0,32:32:81.26:1047,81,0	0/0:21,0:21:63.20:0,63,894	0/0:31,0:31:90.30:0,90,1314	0/0:20,0:20:60.20:0,60,887	0/0:42,0:42:99:0,126,1804	0/0:38,0:38:99:0,108,1552	0/0:7,0:7:21.07:0,21,307
chr10	41468090	.	A	AG	475.80	PASS	AC=32;AF=1.000;AN=32;DP=94;FS=0.000;HRun=2;HaplotypeScore=109.9433;InbreedingCoeff=0.1652;MQ=44.36;MQ0=0;QD=5.41;VQSLOD=0.4285;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,2:2:5.86:38,6,0	./.	1/1:2,0:3:2.97:21,3,0	./.	1/1:2,1:3:6.46:49,6,0	./.	1/1:1,0:1:2.60:10,3,0	1/1:4,0:4:11.07:50,11,0	./.	1/1:5,0:5:7.37:29,7,0	1/1:5,0:5:3.99:11,4,0	1/1:0,2:2:5.83:36,6,0	./.	./.	1/1:6,0:6:13.43:65,13,0	./.	1/1:3,0:3:1.55:4,2,0	./.	1/1:5,0:5:10.47:44,10,0	1/1:8,0:8:8.11:22,8,0	1/1:9,0:9:0.89:3,1,0	./.	./.	./.	1/1:6,0:6:8.25:35,8,0	1/1:12,0:12:14.11:50,14,0	1/1:14,0:14:20.70:82,21,0	./.
chr10	41468168	.	GGAA	G	1149.06	PASS	AB=0.934;AC=21;AF=0.375;AN=56;BaseQRankSum=3.365;DP=313;FS=7.134;HRun=0;HaplotypeScore=100.0933;InbreedingCoeff=-0.0337;MQ=32.81;MQ0=16;MQRankSum=-4.598;QD=5.86;ReadPosRankSum=-4.515;VQSLOD=0.2236;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:18,2:20:99:161,0,217	0/1:5,0:5:5.70:6,0,171	0/0:1,0:1:3.01:0,3,40	0/0:3,0:2:5.99:0,6,87	0/1:11,5:16:9.37:140,0,9	0/0:1,0:1:2.84:0,3,14	0/0:1,0:1:3.01:0,3,33	0/0:24,0:21:33.36:0,33,709	1/1:7,0:7:14.88:54,15,0	0/1:17,1:17:99:111,0,111	0/1:7,0:7:8.65:18,0,9	0/0:13,0:10:14.94:0,15,178	1/1:5,0:5:11.97:73,12,0	0/1:11,5:12:99:196,0,146	0/1:9,1:8:1.89:101,0,2	0/1:14,3:15:37.16:234,0,37	0/0:16,0:15:32.45:0,32,584	0/1:7,0:7:15.57:16,0,28	0/0:20,0:16:20.18:0,20,604	0/0:9,0:9:18.03:0,18,293	0/1:20,0:17:16.31:16,0,165	1/1:5,0:5:8.60:37,9,0	0/1:7,0:7:57.57:58,0,70	0/1:23,0:21:41.79:42,0,65	0/1:11,0:10:9.24:9,0,89	0/0:17,0:17:42.12:0,42,815	0/0:12,0:12:32.60:0,33,531	1/1:1,1:1:3.01:46,3,0
chr10	41468186	.	GGAA	G	3148.07	PASS	AB=0.983;AC=26;AF=0.464;AN=56;BaseQRankSum=-4.806;DP=455;FS=14.151;HRun=0;HaplotypeScore=134.5651;InbreedingCoeff=-0.1151;MQ=42.03;MQ0=17;MQRankSum=1.055;QD=8.89;ReadPosRankSum=-7.688;VQSLOD=-0.6048;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:29:60.71:306,0,61	0/0:5,0:5:15.04:0,15,297	0/0:7,0:2:5.95:0,6,87	0/0:14,0:10:17.63:0,18,242	1/1:25,0:25:35.10:378,35,0	0/1:12,0:12:5.94:79,0,6	1/1:15,0:15:3.66:175,4,0	0/1:26,0:23:48.63:49,0,172	1/1:10,0:10:11.21:64,11,0	0/1:21,1:21:97.07:144,0,97	0/1:10,0:10:45.82:46,0,65	0/1:12,3:12:21.64:257,0,22	0/1:6,0:6:8.93:17,0,9	0/1:24,0:20:53.47:284,0,53	0/1:16,1:15:11.21:164,0,11	0/1:20,0:18:16.13:254,0,16	0/0:20,0:19:40.14:0,40,705	0/1:10,0:10:14.54:91,0,15	0/0:14,0:12:10.64:0,11,316	0/1:14,0:14:22.34:22,0,241	0/1:24,0:22:59.64:60,0,288	0/1:7,0:6:0.60:27,0,1	1/1:17,1:18:24.66:371,25,0	1/1:25,5:28:12.81:462,13,0	0/1:17,0:16:57.33:57,0,122	0/0:24,0:24:10.13:0,10,520	0/0:16,0:15:38.31:0,38,369	0/1:3,0:2:3.90:14,0,4
chr10	41468189	.	AGAGGAG	A	1490.18	PASS	AB=1.000;AC=12;AF=0.214;AN=56;BaseQRankSum=4.625;DP=467;FS=17.642;HRun=0;HaplotypeScore=167.1530;InbreedingCoeff=0.2745;MQ=44.55;MQ0=17;MQRankSum=-3.982;QD=8.56;ReadPosRankSum=-1.098;VQSLOD=1.7098;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:28:99:231,0,115	0/0:5,0:5:15.05:0,15,420	0/0:8,0:3:9.03:0,9,211	0/0:16,0:12:20.21:0,20,529	0/1:24,0:25:41.27:171,0,41	0/0:12,0:12:23.87:0,24,189	0/0:16,0:16:30.33:0,30,237	0/1:26,0:23:17.68:18,0,87	1/1:1,9:10:27.09:460,27,0	0/0:22,0:22:35.02:0,35,410	0/0:12,0:12:14.77:0,15,123	0/0:15,0:12:28.06:0,28,359	1/1:2,4:6:17.78:233,18,0	0/1:24,0:20:84.36:161,0,84	0/0:18,0:16:36.20:0,36,285	0/1:20,0:18:31.34:110,0,31	0/0:19,0:18:36.30:0,36,949	0/0:9,0:9:3.97:0,4,69	0/0:14,0:12:12.83:0,13,420	0/0:15,0:15:3.37:0,3,308	0/1:27,0:25:23.23:23,0,202	1/1:2,6:7:18.05:247,18,0	0/0:19,0:19:20.59:0,21,203	0/0:31,0:29:34.61:0,35,254	0/0:18,0:17:26.88:0,27,314	0/0:24,0:24:6.17:0,6,563	0/0:16,0:15:31.26:0,31,374	0/0:3,0:2:2.27:0,2,11
chr10	41468198	.	G	GGAA	5982.89	PASS	AB=1.000;AC=20;AF=0.357;AN=56;BaseQRankSum=-2.424;DP=507;FS=7.134;HRun=0;HaplotypeScore=145.9091;InbreedingCoeff=0.7954;MQ=54.10;MQ0=14;MQRankSum=-4.579;QD=32.69;ReadPosRankSum=2.163;VQSLOD=5.3722;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:14.95:0,15,347	0/0:5,0:5:15.05:0,15,254	0/0:13,0:8:18.05:0,18,240	0/0:22,0:16:31.37:0,31,423	0/1:23,0:23:40.94:41,0,163	0/0:14,0:14:22.06:0,22,237	0/0:22,0:22:43.23:0,43,406	1/1:15,8:21:51.10:842,51,0	1/1:11,0:11:21.66:321,22,0	0/0:30,0:30:60.22:0,60,637	0/0:12,0:12:21.50:0,22,268	0/0:20,0:17:35.95:0,36,358	1/1:6,0:6:14.73:182,15,0	0/0:23,0:21:25.40:0,25,207	0/0:18,0:16:41.95:0,42,399	0/0:20,0:18:5.13:0,5,127	0/0:19,0:18:40.27:0,40,580	0/0:9,0:9:20.75:0,21,164	1/1:13,4:16:41.99:588,42,0	1/1:7,10:17:41.48:776,41,0	1/1:16,14:28:44.64:1113,45,0	1/1:10,0:9:3.45:127,3,0	0/0:18,0:18:31.41:0,31,251	0/0:29,0:27:48.73:0,49,377	0/0:18,0:18:32.81:0,33,411	1/1:12,11:23:59.15:1243,59,0	1/1:12,8:19:22.60:715,23,0	0/1:3,0:2:11.91:35,0,12
chr10	41468214	.	GGAA	G	1277.99	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.687;DP=542;FS=71.173;HRun=0;HaplotypeScore=150.6941;InbreedingCoeff=0.9845;MQ=66.10;MQ0=2;MQRankSum=-6.741;QD=42.60;ReadPosRankSum=1.833;VQSLOD=1.3563;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:81.28:0,81,1912	0/0:7,0:7:21.07:0,21,497	0/0:21,0:18:51.58:0,52,1111	0/0:30,0:25:45.16:0,45,1156	0/0:26,0:26:72.14:0,72,1522	0/0:17,0:17:51.18:0,51,1239	0/0:26,0:25:74.02:0,74,1713	0/0:20,0:20:57.20:0,57,1327	1/1:1,12:13:36:578,36,0	0/0:31,0:31:89.98:0,90,2089	0/0:13,0:13:36.04:0,36,811	0/0:24,0:23:69.20:0,69,1624	1/1:0,6:6:18.06:320,18,0	0/0:24,0:24:66.22:0,66,1528	0/0:23,0:23:69.24:0,69,1632	0/0:15,0:15:42.14:0,42,1022	0/0:14,0:14:39.13:0,39,960	0/0:13,0:13:39.13:0,39,923	0/0:19,0:19:51.17:0,51,1193	0/0:16,0:16:48.16:0,48,1182	0/0:31,0:30:67.98:0,68,1835	1/1:0,11:11:30.10:521,30,0	0/0:15,0:15:45.15:0,45,1043	0/0:27,0:27:78.18:0,78,1699	0/0:19,0:19:57.20:0,57,1403	0/0:30,0:30:90.31:0,90,2092	0/0:17,0:16:48.16:0,48,1088	0/0:4,0:4:12.04:0,12,244
chr10	41468299	.	G	GT	561.18	PASS	AB=0.666;AC=3;AF=0.054;AN=56;BaseQRankSum=6.630;DP=731;FS=4.877;HRun=0;HaplotypeScore=124.0970;InbreedingCoeff=0.0243;MQ=63.91;MQ0=4;MQRankSum=-6.111;QD=16.03;ReadPosRankSum=-0.323;VQSLOD=5.5903;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,105,1423	0/0:5,0:5:15.05:0,15,210	0/0:27,0:23:57.91:0,58,665	0/0:33,0:28:64.28:0,64,797	0/0:22,0:22:53.76:0,54,755	0/0:22,0:22:63.16:0,63,842	0/0:25,0:25:69.23:0,69,965	0/0:28,0:26:75.24:0,75,1033	0/1:2,5:7:8.23:127,0,8	0/0:27,0:27:77.93:0,78,1049	0/0:14,0:14:42.13:0,42,571	0/0:24,0:24:66.68:0,67,906	0/1:5,2:7:30.15:30,0,106	0/0:30,0:30:84.21:0,84,1089	0/0:28,0:28:81.20:0,81,1048	0/0:18,1:19:10.71:0,11,708	0/0:40,0:40:99:0,120,1665	0/0:28,0:28:78.22:0,78,1069	0/0:20,0:19:51.17:0,51,708	0/0:34,0:34:99:0,102,1409	0/0:77,0:74:99:0,153,2081	0/1:9,12:21:99:504,0,121	0/0:16,0:16:48.15:0,48,655	0/0:45,0:45:99:0,120,1656	0/0:20,0:19:60.19:0,60,823	0/0:47,0:47:99:0,132,1758	0/0:16,0:14:39.11:0,39,527	0/0:10,0:10:30.10:0,30,419
chr10	41468398	.	G	GA	378.76	PASS	AB=0.716;AC=3;AF=0.054;AN=56;BaseQRankSum=6.740;DP=801;FS=34.830;HRun=0;HaplotypeScore=191.9103;InbreedingCoeff=-0.0613;MQ=58.10;MQ0=8;MQRankSum=-4.867;QD=12.63;ReadPosRankSum=-3.674;VQSLOD=2.0442;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,1:37:77.44:0,77,1208	0/0:5,0:5:15.05:0,15,210	0/0:16,0:12:28.55:0,29,312	0/0:19,0:16:27.12:0,27,361	0/0:15,0:15:33.11:0,33,452	0/0:20,0:20:54.14:0,54,702	0/0:25,0:25:66.17:0,66,885	0/0:47,0:38:99:0,108,1432	0/1:3,3:7:62.28:170,0,62	0/0:27,0:27:52.05:0,52,775	0/0:11,0:11:30.08:0,30,399	0/0:28,0:28:84.23:0,84,1126	0/1:5,1:6:82.90:83,0,107	0/0:34,0:34:99:0,102,1337	0/0:32,0:32:90.24:0,90,1205	0/0:25,0:25:72.18:0,72,924	0/0:41,0:40:99:0,120,1645	0/0:29,0:29:86.75:0,87,1135	0/0:38,0:37:97.14:0,97,1300	0/0:35,0:34:90.26:0,90,1186	0/0:101,0:95:99:0,187,2470	0/1:8,8:17:99:226,0,115	0/0:15,0:15:39.12:0,39,525	0/0:48,0:48:99:0,135,1732	0/0:27,0:27:78.22:0,78,1040	0/0:66,0:66:99:0,174,2342	0/0:27,0:26:75.10:0,75,930	0/0:3,0:3:6.02:0,6,84
chr10	41468409	.	G	GT	309.01	PASS	AB=0.900;AC=5;AF=0.089;AN=56;BaseQRankSum=6.602;DP=743;FS=18.274;HRun=0;HaplotypeScore=200.1172;InbreedingCoeff=-0.0999;MQ=59.39;MQ0=6;MQRankSum=-4.980;QD=3.81;ReadPosRankSum=-1.266;VQSLOD=1.9120;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:87.14:0,87,1157	0/0:5,0:5:12.02:0,12,149	0/1:16,0:14:7.24:7,0,357	0/0:19,0:14:21.49:0,21,355	0/0:13,0:13:33.10:0,33,444	0/0:19,0:19:57.19:0,57,790	0/0:26,0:26:72.06:0,72,960	0/0:36,0:27:75.25:0,75,1049	0/1:11,1:12:17.89:18,0,291	0/0:30,0:30:78.25:0,78,1075	0/0:10,0:10:30.09:0,30,402	0/0:32,0:32:93.28:0,93,1251	0/1:6,1:7:26.78:27,0,218	0/0:30,0:30:87.22:0,87,1160	0/0:32,0:32:90.30:0,90,1259	0/0:25,0:25:72.17:0,72,951	0/0:42,0:41:99:0,110,1647	0/1:25,0:25:22.34:22,0,779	0/0:39,0:39:94.55:0,95,1233	0/0:24,0:23:60.20:0,60,827	0/0:74,1:69:99:0,128,1738	0/1:12,9:21:99:348,0,134	0/0:17,0:17:39.09:0,39,523	0/0:42,0:42:99:0,113,1475	0/0:27,0:27:72.24:0,72,1006	0/0:59,0:59:99:0,135,1784	0/0:22,1:22:60.20:0,60,829	0/0:3,0:3:6.02:0,6,84
chr10	41468434	.	G	GA	1153.82	PASS	AB=0.896;AC=7;AF=0.125;AN=56;BaseQRankSum=8.609;DP=699;FS=0.000;HRun=1;HaplotypeScore=225.0519;InbreedingCoeff=-0.1517;MQ=56.32;MQ0=7;MQRankSum=-4.897;QD=6.31;ReadPosRankSum=-0.455;VQSLOD=-0.0581;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:71.96:0,72,1167	0/0:4,0:4:7.94:0,8,115	0/0:22,0:11:10.56:0,11,300	0/0:38,0:21:48.10:0,48,566	0/0:7,0:7:15.05:0,15,195	0/0:16,0:16:45.13:0,45,569	0/0:31,0:31:90.28:0,90,1153	0/0:17,0:13:16.07:0,16,388	0/0:17,0:17:6.08:0,6,491	0/0:35,0:34:96.24:0,96,1203	0/0:7,0:7:17.99:0,18,213	0/0:35,0:35:99:0,105,1362	0/0:9,0:9:27.09:0,27,349	0/0:33,0:33:99:0,99,1256	0/0:33,0:33:96.23:0,96,1184	0/0:24,0:24:72.21:0,72,906	0/0:47,0:46:99:0,122,1596	0/0:24,0:25:35.43:0,35,787	0/1:20,0:20:99:153,0,182	0/1:16,2:17:8.81:9,0,389	0/1:54,17:66:99:406,0,443	0/1:24,0:24:99:132,0,142	0/0:9,0:9:21.03:0,21,253	0/0:43,0:43:99:0,112,1368	0/0:28,0:28:75.22:0,75,958	0/1:30,0:30:99:397,0,189	0/1:16,2:17:99:146,0,170	0/1:1,1:2:32.92:39,0,33
chr10	41468449	.	GGT	G	1452.64	PASS	AB=0.920;AC=12;AF=0.214;AN=56;BaseQRankSum=6.062;DP=733;FS=68.932;HRun=0;HaplotypeScore=246.7114;InbreedingCoeff=0.1074;MQ=56.13;MQ0=6;MQRankSum=-4.614;QD=6.03;ReadPosRankSum=-3.938;VQSLOD=0.2223;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:79.40:0,79,1310	0/0:5,0:4:12.04:0,12,225	0/0:32,0:10:24.03:0,24,287	0/0:39,0:20:35.09:0,35,615	0/0:8,0:8:17.92:0,18,202	0/0:17,0:17:48.14:0,48,568	0/0:35,0:35:99:0,105,1154	0/1:20,0:17:0.30:0,0,398	1/1:6,13:19:38.01:632,38,0	0/0:37,0:36:99:0,105,1345	0/0:8,0:8:14.46:0,14,177	0/0:35,0:35:99:0,99,1228	0/1:2,8:10:24.46:373,0,24	0/0:34,0:34:99:0,99,1161	0/0:29,0:29:87.25:0,87,1087	0/0:24,1:25:23.35:0,23,796	0/0:42,0:41:99:0,126,2306	0/0:25,2:27:12.97:0,13,806	0/1:18,0:17:15.50:15,0,285	0/1:20,0:19:99:106,0,110	0/1:87,0:78:66.26:66,0,581	0/1:18,6:25:99:273,0,204	0/0:7,0:7:15.05:0,15,211	0/0:41,0:41:92.11:0,92,1219	0/0:27,0:27:78.22:0,78,918	0/1:28,0:28:90.07:90,0,244	0/1:12,0:11:36.37:36,0,233	1/1:2,0:2:2.60:10,3,0
chr10	41468451	.	T	TG	3176	PASS	AB=0.773;AC=12;AF=0.214;AN=56;BaseQRankSum=1.973;DP=726;FS=6.448;HRun=2;HaplotypeScore=232.7907;InbreedingCoeff=0.0914;MQ=56.99;MQ0=7;MQRankSum=-2.014;QD=13.63;ReadPosRankSum=-5.726;VQSLOD=0.5835;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:86.10:0,86,683	0/0:6,0:5:12.04:0,12,153	0/0:35,0:12:20.93:0,21,197	0/0:39,0:19:31.22:0,31,455	0/0:10,0:10:18.06:0,18,222	0/0:17,0:17:48.15:0,48,594	0/0:34,0:34:99:0,102,1259	0/1:9,12:18:99:498,0,104	0/1:14,5:19:49.58:132,0,50	0/0:37,0:36:99:0,103,711	0/0:8,0:8:14.70:0,15,98	0/0:35,0:35:90.34:0,90,570	0/1:9,1:10:14.54:15,0,44	0/0:34,0:34:92.01:0,92,1090	0/0:30,0:30:81.90:0,82,516	0/0:24,0:24:60.86:0,61,404	0/0:42,0:41:99:0,122,1554	0/0:26,1:27:31.05:0,31,401	0/1:19,0:18:35.55:434,0,36	0/1:5,12:16:31.82:334,0,32	0/1:44,37:72:99:940,0,118	0/1:21,5:26:86.10:185,0,86	0/0:6,0:6:14.75:0,15,98	0/0:38,2:40:75.10:0,75,591	0/0:27,0:27:75.80:0,76,495	1/1:28,0:28:26.41:572,26,0	0/1:7,4:10:76.12:197,0,76	1/1:1,0:1:3:25,3,0
chr10	41468508	.	GGGAGTGA	G	826.32	PASS	AB=0.844;AC=5;AF=0.089;AN=56;BaseQRankSum=8.239;DP=772;FS=11.905;HRun=0;HaplotypeScore=252.9983;InbreedingCoeff=-0.0847;MQ=61.85;MQ0=7;MQRankSum=-7.856;QD=5.55;ReadPosRankSum=-1.887;VQSLOD=0.6751;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,141,4471	0/0:6,0:6:9.03:0,9,303	0/0:21,0:18:47.47:0,47,1001	0/0:34,0:27:12.97:0,13,938	0/0:17,0:17:30.10:0,30,1009	0/0:24,0:24:69.24:0,69,2423	0/0:29,0:29:66.23:0,66,2235	0/0:37,0:30:58.50:0,58,1440	0/1:7,4:14:54.65:309,0,55	0/0:47,0:47:99:0,117,3818	0/0:15,0:15:42.14:0,42,1495	0/0:32,0:32:69.24:0,69,2366	0/1:4,3:8:20.48:264,0,20	0/0:36,0:36:93.28:0,93,3017	0/0:24,0:24:60.21:0,60,1856	0/0:18,0:18:48.16:0,48,1560	0/0:41,0:41:99:0,99,3268	0/0:27,0:27:72.24:0,72,2421	0/0:19,0:18:42.14:0,42,1187	0/0:22,0:22:48.16:0,48,1629	0/1:94,0:89:99:133,0,4121	0/1:4,4:9:19.22:229,0,19	0/0:13,0:13:31.92:0,32,1066	0/0:45,0:45:99:0,109,3723	0/0:23,0:23:54.19:0,54,1794	0/0:25,0:25:75.25:0,75,2553	0/1:21,0:21:2.38:2,0,1941	0/0:12,0:12:36.12:0,36,1295
chr10	41468652	.	AG	A	645.04	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.198;DP=719;FS=0.849;HRun=2;HaplotypeScore=96.7474;InbreedingCoeff=0.9430;MQ=84.59;MQ0=0;MQRankSum=-0.462;QD=28.05;ReadPosRankSum=3.866;VQSLOD=3.3906;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,147,2185	0/0:8,0:8:24.08:0,24,359	0/0:40,0:39:99:0,112,1617	0/0:32,0:29:46.82:0,47,1008	0/0:17,0:17:48.16:0,48,719	0/0:25,0:25:75.22:0,75,1080	0/0:26,0:26:78.26:0,78,1156	0/0:35,0:34:99:0,99,1445	0/0:34,0:33:96.31:0,96,1416	0/0:30,0:30:90.29:0,90,1315	0/0:10,0:10:30.03:0,30,423	0/0:22,0:22:66.21:0,66,967	0/0:26,0:26:78.25:0,78,1139	0/0:34,0:34:96.31:0,96,1412	0/0:26,0:26:78.26:0,78,1167	0/0:23,0:23:66.22:0,66,980	1/1:0,23:23:57.19:740,57,0	0/0:15,0:15:42.14:0,42,629	0/0:16,0:16:45.13:0,45,651	0/0:32,0:32:90.28:0,90,1300	0/0:41,0:41:99:0,104,1479	0/0:22,0:22:54.09:0,54,746	0/0:19,0:19:54.18:0,54,804	0/0:25,0:25:60.04:0,60,784	0/0:28,0:28:84.27:0,84,1238	0/0:27,0:27:81.27:0,81,1208	0/0:27,0:27:81.26:0,81,1191	0/0:3,0:3:9.03:0,9,135
chr10	41469388	.	TC	T	6303.32	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=11.643;DP=770;FS=1.864;HRun=1;HaplotypeScore=79.4064;InbreedingCoeff=0.9996;MQ=83.82;MQ0=0;MQRankSum=-1.460;QD=38.20;ReadPosRankSum=2.259;VQSLOD=5.5685;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,14:14:36.12:503,36,0	0/0:11,0:11:33.11:0,33,516	0/0:25,0:25:75.21:0,75,1088	0/0:23,0:23:62.32:0,62,916	1/1:0,41:41:99:1672,123,0	0/0:31,0:31:93.27:0,93,1384	0/0:16,0:16:48.16:0,48,741	0/0:42,0:42:99:0,120,1820	0/0:19,0:19:57.19:0,57,887	0/0:40,0:40:99:0,117,1810	0/0:37,0:37:99:0,111,1735	1/1:0,20:20:57.19:797,57,0	0/0:22,0:22:63.21:0,63,984	1/1:0,22:22:63.21:880,63,0	0/0:34,0:34:99:0,102,1548	1/1:0,25:25:66.22:923,66,0	0/0:25,0:25:75.22:0,75,1122	0/0:31,0:31:93.32:0,93,1454	0/0:18,0:18:54.15:0,54,777	0/0:39,0:39:99:0,114,1739	0/0:27,0:27:75.26:0,75,1173	0/0:31,0:31:93.29:0,93,1408	1/1:0,31:31:90.17:1192,90,0	1/1:0,12:12:24.08:336,24,0	0/0:45,0:45:99:0,135,2105	0/0:24,0:24:72.23:0,72,1086	0/0:34,0:34:99:0,102,1537	0/0:31,0:31:93.19:0,93,1397
chr10	41469962	.	ATT	A	13773.16	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=4.303;DP=571;FS=21.460;HRun=9;HaplotypeScore=127.8951;InbreedingCoeff=0.9898;MQ=71.98;MQ0=0;MQRankSum=-6.737;QD=25.70;ReadPosRankSum=3.913;VQSLOD=3.0414;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,36:38:87.25:1014,87,0	0/0:11,0:11:30.09:0,30,460	0/0:17,0:17:35.68:0,36,602	0/0:7,0:7:16.29:0,16,152	1/1:1,21:22:57.08:643,57,0	1/1:0,18:18:45.13:524,45,0	1/1:4,14:18:45.02:494,45,0	1/1:12,13:25:56.94:583,57,0	1/1:1,0:17:28.89:98,29,0	1/1:6,21:27:69.13:785,69,0	1/1:1,17:18:47.97:522,48,0	1/1:1,13:14:33.10:384,33,0	1/1:0,0:23:38.16:145,38,0	1/1:0,20:20:51.15:594,51,0	1/1:1,13:14:36.11:419,36,0	1/1:3,20:23:63.17:719,63,0	1/1:5,25:30:57.15:664,57,0	1/1:4,18:22:39.11:455,39,0	1/1:2,10:12:30.04:326,30,0	1/1:1,25:26:69.11:780,69,0	1/1:2,9:11:21.05:244,21,0	1/1:0,0:12:24.60:83,25,0	1/1:2,24:26:62.94:733,63,0	1/1:2,26:28:66.19:768,66,0	1/1:3,14:17:36.10:419,36,0	1/1:0,23:23:69.21:803,69,0	1/1:1,43:44:99:1362,120,0	1/1:2,6:8:18.04:210,18,0
chr10	41470778	.	G	GCCGT	4386.04	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-7.338;DP=730;FS=10.324;HRun=0;HaplotypeScore=117.4836;InbreedingCoeff=0.9962;MQ=86.80;MQ0=0;MQRankSum=-3.171;QD=54.83;ReadPosRankSum=3.571;VQSLOD=6.3007;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,129,2254	0/0:10,0:10:24.08:0,24,430	0/0:18,0:18:36.12:0,36,619	0/0:31,0:31:75.10:0,75,1208	0/0:28,0:28:78.25:0,78,1371	0/0:23,0:23:63.21:0,63,1098	0/0:22,0:22:57.20:0,57,1025	0/0:31,0:31:66.23:0,66,1177	1/1:2,20:25:54.19:1399,54,0	0/0:34,0:34:87.29:0,87,1512	0/0:22,0:22:66.23:0,66,1174	0/0:23,0:23:69.24:0,69,1240	1/1:3,30:34:72.25:1864,72,0	0/0:20,0:20:54.17:0,54,923	0/0:33,0:33:90.31:0,90,1612	0/0:22,0:22:60.21:0,60,1073	0/0:29,0:29:78.27:0,78,1388	0/0:23,0:23:66.16:0,66,1118	0/0:22,0:22:57.20:0,57,1020	0/0:34,0:34:84.27:0,84,1452	0/0:48,0:48:99:0,111,1953	1/1:1,20:21:45.15:1123,45,0	0/0:22,0:22:51.17:0,51,906	0/0:44,0:44:99:0,126,2154	0/0:19,0:19:57.20:0,57,1014	0/0:22,0:22:57.18:0,57,962	0/0:14,0:14:30.10:0,30,539	0/0:6,0:6:18.06:0,18,323
chr10	41471145	.	CAGGCCTTCTGAAG	C	4346.67	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=10.307;DP=695;FS=4.984;HRun=0;HaplotypeScore=255.8665;InbreedingCoeff=0.9600;MQ=85.20;MQ0=0;MQRankSum=-9.795;QD=66.87;ReadPosRankSum=2.311;VQSLOD=4.2985;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,129,7872	0/0:8,0:8:24.08:0,24,1451	0/0:24,0:24:36.12:0,36,1447	0/0:23,0:23:43.13:0,43,2255	0/0:17,0:17:39.13:0,39,2299	0/0:20,0:20:51.16:0,51,3020	0/0:30,0:30:72.25:0,72,4389	0/0:31,0:31:69.23:0,69,3752	1/1:4,22:26:57.20:2186,57,0	0/0:20,0:20:45.11:0,45,2126	0/0:19,0:19:54.19:0,54,3313	0/0:31,0:31:84.27:0,84,5049	1/1:5,15:20:39.13:1495,39,0	0/0:22,0:22:60.21:0,60,3860	0/0:28,0:28:75.26:0,75,4729	0/0:26,0:26:66.23:0,66,3954	0/0:29,0:29:78.27:0,78,4879	0/0:34,0:34:93.32:0,93,5567	0/0:21,0:21:57.20:0,57,3213	0/0:30,0:30:69.24:0,69,3926	0/0:55,0:55:99:0,147,8426	1/1:9,10:19:18.06:666,18,0	0/0:15,0:15:42.13:0,42,2323	0/0:25,0:25:63.22:0,63,3705	0/0:17,0:17:39.13:0,39,2381	0/0:27,0:27:48.16:0,48,3006	0/0:22,0:22:54.19:0,54,3307	0/0:3,0:3:6.02:0,6,249
chr10	41471998	.	G	GTCTCTC	143.98	PASS	AC=2;AF=0.038;AN=52;BaseQRankSum=2.738;DP=649;FS=1.593;HRun=0;HaplotypeScore=190.6086;InbreedingCoeff=0.9168;MQ=64.80;MQ0=1;MQRankSum=-3.710;QD=20.57;ReadPosRankSum=-0.107;VQSLOD=3.4570;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:51.17:0,51,906	0/0:11,0:11:30.10:0,30,669	0/0:48,0:38:96.30:0,96,1920	0/0:24,0:20:38.60:0,39,814	0/0:27,0:27:60.15:0,60,1020	0/0:26,0:25:42.09:0,42,815	0/0:20,0:20:48.14:0,48,968	0/0:37,0:37:81.15:0,81,1435	./.	0/0:27,0:27:69.24:0,69,1540	0/0:20,0:20:57.20:0,57,1254	0/0:19,0:18:24.06:0,24,492	1/1:7,0:7:9.03:227,9,0	0/0:18,0:18:39.12:0,39,675	0/0:26,0:26:69.20:0,69,1453	0/0:16,0:16:39.06:0,39,637	0/0:27,0:27:66.19:0,66,1081	0/0:29,0:29:75.22:0,75,1636	0/0:22,0:21:42.04:0,42,742	0/0:16,0:16:24.03:0,24,437	0/0:12,0:11:15.05:0,15,307	./.	0/0:28,0:28:48.16:0,48,1033	0/0:19,0:19:39.13:0,39,870	0/0:32,0:32:87.30:0,87,1919	0/0:38,0:38:44.17:0,44,1301	0/0:31,0:31:65.87:0,66,901	0/0:17,0:17:24.07:0,24,382
chr10	41472012	.	A	ATGTG	10125.52	PASS	AB=0.724;AC=26;AF=0.500;AN=52;BaseQRankSum=6.559;DP=671;FS=12.879;HRun=0;HaplotypeScore=135.2213;InbreedingCoeff=0.7547;MQ=56.84;MQ0=12;MQRankSum=-5.811;QD=31.16;ReadPosRankSum=-0.246;VQSLOD=4.3542;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:17,5:22:38.44:758,38,0	0/0:13,0:13:30.77:0,31,533	0/0:53,0:32:49.68:0,50,723	0/0:38,0:18:32.49:0,32,420	1/1:14,9:22:47.62:966,48,0	1/1:4,0:26:31.20:138,31,0	0/1:10,0:20:15.77:115,0,16	1/1:37,0:36:46.94:860,47,0	./.	0/0:27,0:27:68.91:0,69,1155	0/0:22,0:22:54.15:0,54,865	0/0:19,0:18:21.07:0,21,360	0/0:7,0:7:0.36:0,0,3	1/1:12,6:17:24.08:558,24,0	0/0:26,0:26:66.21:0,66,1105	1/1:7,12:19:42.13:963,42,0	1/1:13,16:29:63.11:1267,63,0	0/0:33,0:32:84.19:0,84,1316	0/1:15,5:17:10.30:590,0,10	1/1:13,3:17:0.51:339,1,0	1/1:14,1:13:19.02:252,19,0	./.	0/0:25,0:25:12.24:0,12,612	0/0:26,0:28:2.46:0,2,652	0/0:31,0:31:75.22:0,75,1214	1/1:27,10:36:84.41:1731,84,0	1/1:13,12:25:48.13:1045,48,0	1/1:10,3:12:25.90:542,26,0
chr10	41472024	.	GTA	G	3986.90	PASS	AB=0.888;AC=20;AF=0.385;AN=52;BaseQRankSum=6.497;DP=709;FS=5.810;HRun=0;HaplotypeScore=137.8641;InbreedingCoeff=0.3482;MQ=49.44;MQ0=25;MQRankSum=-3.372;QD=12.82;ReadPosRankSum=-0.338;VQSLOD=3.1800;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:21,5:26:99:184,0,149	0/0:18,0:18:47.13:0,47,679	0/0:51,0:19:39.98:0,40,743	0/0:52,0:14:24.60:0,25,561	0/1:22,4:25:7.27:388,0,7	0/0:29,0:28:38.77:0,39,362	0/1:27,0:24:10.48:10,0,237	0/1:20,12:30:42.48:548,0,42	./.	0/0:30,0:28:53.07:0,53,1290	0/0:20,0:20:60.16:0,60,1017	0/0:26,0:24:27.07:0,27,454	1/1:6,0:6:1.55:29,2,0	1/1:13,2:14:24.02:269,24,0	0/0:27,0:26:69.18:0,69,1254	0/1:22,0:21:94.86:95,0,218	1/1:21,5:26:63.06:661,63,0	0/0:38,0:37:69.44:0,69,1462	0/1:20,2:16:65.20:197,0,65	0/1:15,2:17:2.47:215,0,2	0/1:15,3:15:1.23:169,0,1	./.	0/0:27,0:27:3.33:0,3,685	0/0:34,1:35:0.42:0,0,819	0/0:28,0:28:81.08:0,81,1449	1/1:26,10:33:25.01:621,25,0	1/1:19,6:24:33.64:332,34,0	1/1:9,3:11:24.23:269,24,0
chr10	41472032	.	ATG	A	1043.68	PASS	AB=0.983;AC=8;AF=0.154;AN=52;BaseQRankSum=4.806;DP=711;FS=2.783;HRun=0;HaplotypeScore=148.7581;InbreedingCoeff=0.5739;MQ=45.26;MQ0=29;MQRankSum=1.551;QD=9.24;ReadPosRankSum=2.561;VQSLOD=3.5434;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:24:43.39:0,43,671	0/0:14,3:17:1.43:0,1,505	0/0:51,0:14:3.01:0,3,49	0/0:55,0:11:14.96:0,15,167	1/1:13,14:26:24.61:434,25,0	0/0:29,0:28:33.08:0,33,514	0/0:25,0:22:20.76:0,21,307	0/0:30,0:27:26.09:0,26,261	./.	0/1:27,1:26:7.56:8,0,872	0/0:18,1:19:14.23:0,14,716	0/0:24,3:25:27.07:0,27,407	0/0:6,0:6:2.94:0,3,18	1/1:4,12:15:14.21:208,14,0	0/0:29,0:28:72.23:0,72,1144	0/0:22,0:21:42.13:0,42,659	1/1:6,19:25:45.13:531,45,0	0/0:36,2:37:8.03:0,8,1233	0/0:17,0:16:21.54:0,22,159	0/1:10,0:16:2.13:2,0,27	0/0:15,0:16:2.96:0,3,19	./.	0/0:27,0:26:41.42:0,41,606	0/0:33,0:33:38.85:0,39,564	0/0:28,0:28:66.21:0,66,1044	0/0:25,0:36:55.34:0,55,462	0/0:13,0:26:26.40:0,26,267	0/0:9,0:11:11.46:0,11,79
chr10	41472048	.	GTC	G	444.16	PASS	AB=0.993;AC=13;AF=0.260;AN=50;BaseQRankSum=9.917;DP=741;FS=0.970;HRun=0;HaplotypeScore=151.3442;InbreedingCoeff=0.2938;MQ=43.11;MQ0=42;MQRankSum=-0.211;QD=2.11;ReadPosRankSum=0.964;VQSLOD=2.7084;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,2:26:45.04:0,45,769	0/0:17,0:17:19.99:0,20,620	0/0:52,0:3:8.96:0,9,97	0/0:74,0:7:20.58:0,21,211	1/1:25,3:27:0.06:116,0,0	0/0:25,0:24:32.46:0,32,589	0/0:29,0:25:17.75:0,18,300	0/0:33,0:27:34.63:0,35,330	./.	0/0:28,0:26:41.47:0,41,1061	0/0:20,0:20:23.57:0,24,835	0/0:28,0:26:24.05:0,24,307	./.	0/1:19,0:18:2.41:55,0,2	0/0:30,0:29:75.20:0,75,1388	0/0:24,0:23:51.06:0,51,821	0/1:28,0:27:39.44:144,0,39	0/0:40,0:39:68.80:0,69,1606	0/1:21,0:13:7.70:8,0,83	1/1:17,0:16:3.36:54,3,0	1/1:18,1:16:1.57:6,2,0	./.	0/0:28,0:27:29.25:0,29,514	0/0:34,0:34:59.25:0,59,614	0/0:27,0:27:75.16:0,75,1234	0/1:43,0:38:86.03:86,0,263	0/1:28,1:28:68.95:97,0,69	1/1:7,0:6:1.16:13,1,0
chr10	41472056	.	ATG	A	1086.86	PASS	AB=1.000;AC=9;AF=0.180;AN=50;BaseQRankSum=3.120;DP=709;FS=9.248;HRun=0;HaplotypeScore=142.3731;InbreedingCoeff=0.5058;MQ=42.81;MQ0=41;MQRankSum=-0.723;QD=5.94;ReadPosRankSum=1.175;VQSLOD=2.8439;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:25:48.30:0,48,755	0/0:20,0:20:53.33:0,53,769	0/0:47,0:3:8.92:0,9,115	0/0:69,0:7:12.04:0,12,192	0/0:25,0:25:24.08:0,24,386	0/0:13,0:25:16.18:0,16,122	0/0:16,0:24:7.12:0,7,52	0/1:25,0:27:16.73:17,0,177	./.	0/0:25,0:22:53.67:0,54,769	0/0:20,0:20:46.67:0,47,727	1/1:6,21:25:15.05:191,15,0	./.	0/0:19,0:18:15.05:0,15,230	0/0:32,0:31:69.19:0,69,1069	0/0:23,1:23:42.14:0,42,690	0/0:26,0:25:48.10:0,48,725	0/0:42,0:41:99:0,102,1642	0/0:15,0:12:13.40:0,13,76	0/0:15,0:15:1.55:0,2,4	0/0:18,0:15:0:0,0,0	./.	1/1:5,20:24:21.05:253,21,0	1/1:5,29:34:51.16:648,51,0	0/0:25,0:25:51.59:0,52,791	0/1:30,0:31:50:109,0,50	0/1:26,0:28:16.82:17,0,62	0/0:3,0:3:5.78:0,6,20
chr10	41472066	.	GTGTA	G	1968.79	PASS	AB=0.835;AC=13;AF=0.241;AN=54;BaseQRankSum=6.354;DP=677;FS=0.473;HRun=0;HaplotypeScore=163.4693;InbreedingCoeff=0.6123;MQ=43.52;MQ0=35;MQRankSum=-8.808;QD=10.88;ReadPosRankSum=-2.511;VQSLOD=2.6054;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:25:46.02:0,46,408	0/0:20,0:20:53.76:0,54,1118	0/0:37,0:3:9.03:0,9,135	0/0:52,0:5:12.04:0,12,181	0/0:24,0:23:29.66:0,30,401	0/1:22,2:24:13.88:140,0,14	0/0:32,0:28:8.41:0,8,109	0/1:34,1:29:54.55:336,0,55	./.	0/0:24,0:22:53.73:0,54,1084	0/0:19,0:19:56.93:0,57,1093	0/0:27,0:25:20.81:0,21,148	0/0:7,0:7:2.92:0,3,17	0/0:19,0:18:15.03:0,15,299	0/0:33,0:32:60.81:0,61,1536	0/0:27,0:26:43.80:0,44,503	0/0:25,0:24:47.65:0,48,939	0/0:40,0:39:99:0,103,2335	1/1:14,4:12:3.97:219,4,0	0/1:5,9:13:0.01:0,0,0	1/1:21,3:18:2.70:24,3,0	0/0:5,0:5:0:0,0,0	0/0:23,0:22:20:0,20,124	0/0:34,0:34:55.99:0,56,360	0/0:19,0:19:27.35:0,27,982	1/1:22,15:33:71.90:969,72,0	1/1:15,9:23:30.25:354,30,0	1/1:4,1:4:11.90:86,12,0
chr10	41472068	.	GTA	G	1372.73	PASS	AB=0.978;AC=17;AF=0.315;AN=54;BaseQRankSum=7.155;DP=666;FS=4.807;HRun=0;HaplotypeScore=149.7171;InbreedingCoeff=0.5065;MQ=43.58;MQ0=32;MQRankSum=-5.527;QD=5.14;ReadPosRankSum=-0.922;VQSLOD=2.5569;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,1:25:47.18:0,47,664	0/0:20,0:20:53.18:0,53,867	0/0:34,0:3:2.19:0,2,90	0/0:47,1:5:12.01:0,12,161	0/0:23,0:23:29.66:0,30,379	0/1:24,0:24:55.17:63,0,55	0/0:31,0:27:6.31:0,6,107	0/1:33,3:30:77.94:247,0,78	./.	0/0:22,0:20:56.70:0,57,858	0/0:20,0:20:60.03:0,60,924	0/1:27,1:26:29.83:53,0,30	0/0:6,0:6:2.92:0,3,17	0/0:19,0:18:15.03:0,15,255	0/0:32,0:31:60.94:0,61,1247	0/0:26,0:25:44.63:0,45,643	0/0:24,0:23:47.62:0,48,792	0/0:40,0:39:99:0,102,1832	0/1:19,0:12:11.84:89,0,12	0/1:14,0:13:0.01:0,0,0	1/1:20,2:17:2.69:24,3,0	0/0:5,0:5:0:0,0,0	1/1:23,0:22:19.40:92,19,0	1/1:34,0:34:22.36:224,22,0	0/0:19,0:19:29.24:0,29,756	1/1:34,2:32:68.23:520,68,0	1/1:24,0:23:22.44:165,22,0	1/1:6,0:5:13.65:73,14,0
chr10	41472076	.	ATGTG	A	1246.46	PASS	AB=0.941;AC=17;AF=0.315;AN=54;BaseQRankSum=3.230;DP=676;FS=3.781;HRun=0;HaplotypeScore=163.6944;InbreedingCoeff=0.2159;MQ=43.33;MQ0=38;MQRankSum=0.738;QD=4.28;ReadPosRankSum=1.283;VQSLOD=2.6862;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:14,13:26:45.36:764,45,0	0/0:19,0:20:45.66:0,46,792	1/1:32,0:3:2.04:6,2,0	./.	0/1:13,0:17:22.51:23,0,39	0/0:23,1:27:24.44:0,24,115	0/1:23,1:28:23.97:24,0,70	0/0:47,0:40:51.91:0,52,314	0/1:7,0:7:0:0,0,0	0/0:22,0:20:32.57:0,33,564	0/0:19,0:19:33.11:0,33,771	0/0:26,0:24:18.06:0,18,401	0/0:8,0:7:4.73:0,5,39	0/0:11,0:18:6:0,6,54	0/0:33,0:32:60.20:0,60,1158	1/1:12,15:26:26.03:444,26,0	0/0:13,0:23:26.61:0,27,470	0/0:34,0:39:77.10:0,77,1440	0/1:24,0:16:12.92:13,0,76	0/0:14,0:14:5.36:0,5,22	0/1:26,0:18:6.71:8,0,7	0/0:11,0:8:0:0,0,0	0/1:20,0:21:12.99:13,0,149	0/0:34,0:34:54.07:0,54,1172	0/1:14,0:16:19.56:20,0,488	0/1:32,0:29:22.72:71,0,23	1/1:17,0:17:2.35:14,2,0	0/1:7,0:6:0.43:0,0,12
chr10	41472098	.	GTGTC	G	740.63	PASS	AB=0.993;AC=13;AF=0.232;AN=56;BaseQRankSum=7.875;DP=642;FS=5.001;HRun=0;HaplotypeScore=158.5104;InbreedingCoeff=0.1022;MQ=45.86;MQ0=25;MQRankSum=-1.567;QD=3.32;ReadPosRankSum=3.762;VQSLOD=2.3159;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:29:49.95:332,0,50	0/0:17,0:17:24.69:0,25,841	0/1:27,0:4:0.69:8,0,1	0/0:42,0:3:5.78:0,6,35	0/1:14,1:15:11.15:40,0,11	0/0:21,0:21:35.81:0,36,286	0/0:33,0:29:20.06:0,20,371	0/0:46,0:42:62.11:0,62,498	1/1:11,0:11:0.88:2,1,0	0/0:19,0:18:36.01:0,36,716	0/0:14,0:14:39.08:0,39,872	0/0:21,1:20:25.27:0,25,506	0/1:10,0:9:8.37:8,0,29	0/0:14,3:16:1.97:0,2,6	0/0:25,0:25:63:0,63,1364	0/1:21,0:20:15.01:191,0,15	0/0:20,0:19:40.32:0,40,680	0/0:32,0:32:80.58:0,81,1617	0/1:20,0:14:55.06:55,0,70	0/0:23,0:22:14.07:0,14,107	0/1:33,0:26:0.30:0,0,110	0/0:16,0:13:0:0,0,0	0/0:18,0:17:24.02:0,24,320	0/0:36,0:36:69.13:0,69,1406	0/0:18,0:18:23.40:0,23,634	0/1:31,0:29:99:181,0,160	0/1:19,0:19:23.66:24,0,96	1/1:6,0:6:6.16:37,6,0
chr10	41472108	.	A	ATG	3144.56	PASS	AB=0.831;AC=14;AF=0.250;AN=56;BaseQRankSum=1.269;DP=650;FS=2.273;HRun=0;HaplotypeScore=142.4099;InbreedingCoeff=0.4034;MQ=48.04;MQ0=22;MQRankSum=-4.097;QD=14.23;ReadPosRankSum=-1.339;VQSLOD=3.0970;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:60.15:0,60,728	0/0:18,0:18:35.51:0,36,406	0/0:31,0:6:6.80:0,7,51	0/0:48,0:6:2.19:0,2,65	0/1:15,0:15:29.09:52,0,29	0/0:23,0:23:36.05:0,36,433	0/0:36,0:32:59.78:0,60,716	0/1:30,9:36:84.38:504,0,84	0/0:11,0:11:2.74:0,3,15	0/0:16,0:15:35.94:0,36,422	0/0:16,0:16:39.12:0,39,477	0/0:20,0:19:20.90:0,21,260	0/0:10,0:9:5.12:0,5,29	0/1:16,0:16:13.80:14,0,31	0/0:25,0:26:59.77:0,60,716	0/0:19,0:19:29.87:0,30,372	0/0:22,0:21:48.11:0,48,577	0/0:32,0:32:69.19:0,69,837	1/1:8,12:15:39.08:578,39,0	0/1:4,17:20:13.11:320,0,13	0/1:13,20:32:80.63:314,0,81	0/1:19,0:17:0:0,0,0	0/0:16,0:15:27.05:0,27,308	0/0:33,0:34:66.17:0,66,790	0/0:19,0:19:36.08:0,36,429	1/1:8,24:31:55.80:1156,56,0	1/1:6,14:20:18.06:275,18,0	1/1:2,3:5:7.27:101,7,0
chr10	41472709	.	AT	A	2980.62	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=3.872;DP=652;FS=5.361;HRun=8;HaplotypeScore=112.6287;InbreedingCoeff=0.9925;MQ=80.77;MQ0=0;MQRankSum=-4.582;QD=25.05;ReadPosRankSum=1.117;VQSLOD=3.2241;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,35:39:99:985,102,0	0/0:5,0:5:12.04:0,12,145	0/0:20,0:20:38.86:0,39,382	0/0:14,0:14:30.09:0,30,358	0/0:27,0:27:72.22:0,72,870	0/0:4,0:25:57.47:0,57,292	0/0:2,0:25:43.19:0,43,241	0/0:33,0:33:90.26:0,90,1072	1/1:0,16:16:48.08:463,48,0	0/0:33,0:33:87.25:0,87,1023	0/0:23,0:23:66.20:0,66,796	0/0:5,0:30:57.47:0,57,285	1/1:2,23:25:66.10:637,66,0	0/0:20,0:20:60.17:0,60,714	0/0:30,0:30:84.26:0,84,1015	1/1:2,20:22:60.09:579,60,0	0/0:19,0:19:51.14:0,51,603	0/0:20,0:20:57.17:0,57,687	0/0:26,0:26:66.20:0,66,795	0/0:29,0:29:72.22:0,72,870	0/0:11,0:11:33.10:0,33,399	1/1:0,17:17:51.08:492,51,0	0/0:3,0:15:28.81:0,29,151	0/0:4,0:26:57.28:0,57,318	0/0:20,0:21:60.05:0,60,702	0/0:32,0:32:78.22:0,78,911	0/0:32,0:32:93.26:0,93,1100	0/0:17,0:17:36.11:0,36,435
chr10	41472756	.	TTAG	T	2735.98	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=12.331;DP=669;FS=7.765;HRun=0;HaplotypeScore=143.1836;InbreedingCoeff=0.9940;MQ=90.20;MQ0=0;MQRankSum=-11.654;QD=39.09;ReadPosRankSum=1.053;VQSLOD=4.8812;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:32:96.33:0,96,2180	0/0:9,0:9:27.09:0,27,615	0/0:27,0:27:81.26:0,81,1708	0/0:26,0:26:72.25:0,72,1573	0/0:34,0:34:99:0,99,2193	0/0:27,0:27:75.26:0,75,1720	0/0:21,0:21:57.18:0,57,1261	0/0:21,0:21:57.19:0,57,1238	1/1:3,18:21:54.18:918,54,0	0/0:27,0:27:78.26:0,78,1724	0/0:25,0:25:75.26:0,75,1708	0/0:22,0:22:54.19:0,54,1245	1/1:1,21:22:57.20:970,57,0	0/0:21,0:21:63.19:0,63,1316	0/0:31,0:31:87.30:0,87,1968	0/0:27,0:27:78.27:0,78,1790	0/0:21,0:21:63.22:0,63,1429	0/0:20,0:20:57.20:0,57,1314	0/0:20,0:20:54.18:0,54,1204	0/0:34,0:34:99:0,102,2343	0/0:22,0:22:63.22:0,63,1435	1/1:1,26:27:60.16:990,60,0	0/0:25,0:25:75.26:0,75,1716	0/0:27,0:27:81.28:0,81,1868	0/0:15,0:15:42.14:0,42,965	0/0:34,0:34:99:0,99,2257	0/0:25,0:25:75.26:0,75,1720	0/0:5,0:5:15.05:0,15,346
chr10	41472961	.	AT	A	1416.42	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=11.012;DP=617;FS=1.112;HRun=7;HaplotypeScore=70.9446;InbreedingCoeff=0.9728;MQ=78.85;MQ0=0;MQRankSum=-1.959;QD=25.75;ReadPosRankSum=2.026;VQSLOD=4.4271;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,126,1512	0/0:9,0:9:27.09:0,27,340	0/0:16,0:15:24.94:0,25,286	0/0:22,0:22:7.78:0,8,333	0/0:28,0:28:81.25:0,81,1006	0/0:29,0:29:81.26:0,81,1019	0/0:20,0:19:60.16:0,60,727	0/0:30,0:30:78.23:0,78,951	1/1:1,19:20:57.13:581,57,0	0/0:28,0:28:77.45:0,77,932	0/0:21,0:21:62.78:0,63,753	0/0:12,0:13:36.12:0,36,453	1/1:0,12:12:36.08:367,36,0	0/0:22,0:22:57.18:0,57,717	0/0:15,0:15:45.14:0,45,566	0/0:22,0:22:63.19:0,63,776	0/0:22,0:22:57.18:0,57,717	0/0:30,0:30:81.22:0,81,1001	0/0:22,0:22:60.19:0,60,754	0/0:25,0:25:72.23:0,72,906	0/0:14,0:14:39.12:0,39,490	1/1:2,21:23:60.14:611,60,0	0/0:21,0:21:58.04:0,58,703	0/0:15,0:15:42.13:0,42,528	0/0:33,0:33:96.29:0,96,1183	0/0:21,0:21:57.18:0,57,707	0/0:25,0:25:72.21:0,72,881	0/0:14,0:14:42.13:0,42,528
chr10	41474571	.	GAATTCACCAATTCAGCTAGACCGCTGGCCAGC	G	2422.52	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.413;DP=685;FS=6.963;HRun=0;HaplotypeScore=522.9160;InbreedingCoeff=0.9619;MQ=88.12;MQ0=0;MQRankSum=-5.399;QD=83.54;ReadPosRankSum=2.735;VQSLOD=0.7917;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,153,18607	0/0:6,0:6:18.06:0,18,2012	0/0:26,0:26:75.26:0,75,4117	0/0:25,0:25:69.24:0,69,3805	0/0:35,0:35:99:0,105,12445	1/1:13,8:21:21.07:1777,21,0	1/1:4,4:8:9.03:759,9,0	0/0:28,0:28:75.25:0,75,5276	0/0:21,0:21:60.21:0,60,7202	0/0:36,0:36:99:0,105,12835	0/0:22,0:22:66.23:0,66,8104	0/0:22,0:22:66.23:0,66,8112	0/0:26,0:26:72.23:0,72,7895	0/0:29,0:29:81.28:0,81,10159	0/0:28,0:28:81.26:0,81,9925	0/0:27,0:27:81.28:0,81,9852	0/0:33,0:33:99:0,99,11507	0/0:12,0:12:36.12:0,36,5236	0/0:17,0:17:51.17:0,51,5367	0/0:31,0:31:93.32:0,93,11258	0/0:20,0:20:53.85:0,54,6214	0/0:27,0:27:78.27:0,78,9050	0/0:32,0:32:93.32:0,93,11087	0/0:23,0:23:69.24:0,69,8374	0/0:21,0:21:63.22:0,63,7692	0/0:26,0:26:78.27:0,78,9833	0/0:24,0:24:69.24:0,69,9015	0/0:8,0:8:24.08:0,24,3327
chr10	41476745	.	TGGAG	T	171.52	PASS	AB=0.908;AC=5;AF=0.089;AN=56;BaseQRankSum=5.597;DP=710;FS=15.917;HRun=0;HaplotypeScore=151.5643;InbreedingCoeff=-0.0981;MQ=71.92;MQ0=11;MQRankSum=-4.556;QD=1.97;ReadPosRankSum=-5.425;VQSLOD=-0.4306;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:15.22:0,15,938	0/0:14,0:14:42.14:0,42,976	0/0:47,0:33:30.71:0,31,1754	0/0:32,0:19:11.67:0,12,1146	0/0:22,0:22:60.18:0,60,1234	0/0:21,0:21:43.08:0,43,882	0/0:22,1:23:54.17:0,54,1197	0/0:51,0:48:90.74:0,91,2333	0/1:18,0:18:44.66:45,0,494	0/0:30,0:30:87.29:0,87,2182	0/0:22,0:22:66.21:0,66,1559	0/0:36,0:36:74.91:0,75,1510	0/0:11,0:11:21.07:0,21,478	0/0:27,0:26:63.20:0,63,1458	0/0:26,0:26:68.26:0,68,1630	0/1:24,0:24:9.47:9,0,727	0/0:22,0:21:51.13:0,51,1179	0/0:18,0:18:34.72:0,35,1170	0/1:18,3:18:99:111,0,916	0/0:19,0:18:26.10:0,26,569	0/0:36,10:46:72:0,72,1499	0/0:11,0:11:24.03:0,24,546	0/1:20,0:20:21.36:21,0,569	0/0:25,0:25:29.90:0,30,684	0/0:30,0:30:81.27:0,81,2013	0/0:27,0:27:65.04:0,65,1635	0/0:26,0:26:58.06:0,58,1355	0/1:2,2:4:74.87:101,0,75
chr10	41477329	.	T	TA	1858.83	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-5.761;DP=505;FS=0.000;HRun=5;HaplotypeScore=59.1525;InbreedingCoeff=0.9815;MQ=82.98;MQ0=0;MQRankSum=0.192;QD=33.19;ReadPosRankSum=1.437;VQSLOD=4.0434;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:72.16:0,72,761	0/0:4,0:4:12.03:0,12,129	0/0:17,0:17:45.10:0,45,471	0/0:14,0:14:30.07:0,30,320	0/0:30,0:30:90.19:0,90,948	0/0:26,0:26:66.17:0,66,709	0/0:20,0:20:48.10:0,48,505	0/0:18,0:18:42.10:0,42,451	1/1:0,15:15:45.15:592,45,0	0/0:22,0:22:60.15:0,60,645	0/0:21,0:21:60.15:0,60,644	0/0:17,0:17:48.12:0,48,516	1/1:2,17:19:51.16:666,51,0	0/0:19,0:19:51.12:0,51,546	0/0:17,0:17:48.12:0,48,516	0/0:21,0:21:60.15:0,60,645	0/0:36,0:36:99:0,102,1094	0/0:18,0:18:42.10:0,42,451	0/0:5,0:5:15.04:0,15,161	0/0:14,0:14:39.10:0,39,417	0/0:7,0:7:21.05:0,21,224	1/1:4,18:22:59.76:744,60,0	0/0:24,0:24:63.16:0,63,676	0/0:18,0:17:39.10:0,39,418	0/0:19,0:19:51.13:0,51,548	0/0:17,0:17:42.10:0,42,447	0/0:10,0:10:30.08:0,30,322	0/0:10,0:10:30.08:0,30,322
chr10	41477397	.	CTGTGTG	C	3071.50	PASS	AB=1.000;AC=31;AF=0.596;AN=52;BaseQRankSum=7.685;DP=472;FS=2.799;HRun=0;HaplotypeScore=145.5235;InbreedingCoeff=0.6876;MQ=63.96;MQ0=6;MQRankSum=-7.501;QD=11.86;ReadPosRankSum=2.184;VQSLOD=2.6008;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:23:10.44:0,10,168	0/0:9,0:12:26.83:0,27,686	./.	0/0:19,0:14:5.97:0,6,76	1/1:10,10:21:12.50:213,13,0	1/1:10,14:26:21:352,21,0	1/1:8,12:21:21.04:346,21,0	1/1:12,0:12:9.03:124,9,0	0/1:10,0:10:3.33:77,0,3	0/0:22,0:21:42.14:0,42,1207	0/0:24,0:24:42.12:0,42,1129	1/1:12,5:18:20.97:335,21,0	0/1:13,0:13:30.52:48,0,31	1/1:13,9:23:30.09:564,30,0	0/0:11,0:12:21.07:0,21,622	0/0:13,0:23:8.61:0,9,126	1/1:16,0:28:30.52:377,31,0	0/0:22,0:23:48.14:0,48,1184	./.	1/1:16,0:15:6.02:84,6,0	1/1:6,0:6:0.34:1,0,0	0/1:9,0:9:0:0,0,0	1/1:12,1:12:8.99:143,9,0	1/1:12,3:17:2.88:59,3,0	0/0:25,0:25:54.02:0,54,1487	1/1:15,0:15:25.32:327,25,0	1/1:8,0:8:15.05:198,15,0	1/1:1,0:1:2.22:7,2,0
chr10	41477411	.	GT	G	38.94	PASS	AB=0.709;AC=5;AF=0.089;AN=56;BaseQRankSum=8.238;DP=493;FS=4.685;HRun=1;HaplotypeScore=141.0508;InbreedingCoeff=0.1993;MQ=48.44;MQ0=10;MQRankSum=-5.135;QD=0.83;ReadPosRankSum=4.310;VQSLOD=-0.6397;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:36.71:0,37,404	0/0:13,0:13:31.57:0,32,385	0/0:22,0:8:24.05:0,24,279	0/0:18,0:10:22.10:0,22,309	0/0:21,0:21:16.26:0,16,240	0/0:25,0:25:24:0,24,283	0/0:25,0:23:29.20:0,29,272	0/0:17,0:17:31.11:0,31,400	0/1:5,4:9:14.60:45,0,15	0/0:22,0:21:59.01:0,59,847	0/0:21,0:21:62.41:0,62,854	0/0:21,0:20:20.23:0,20,251	0/1:7,5:13:14.35:14,0,78	0/0:20,0:20:4.81:0,5,157	0/0:13,0:13:31.92:0,32,445	0/0:21,0:21:33.57:0,34,402	0/0:24,0:24:24.54:0,25,327	0/0:24,0:22:62.02:0,62,880	0/0:7,0:5:12:0,12,134	1/1:13,0:13:1.77:4,2,0	0/0:10,0:10:11.80:0,12,150	0/1:8,4:12:4.96:77,0,5	0/0:12,0:11:19.12:0,19,200	0/0:25,0:25:19.06:0,19,228	0/0:27,0:27:76.61:0,77,1028	0/0:19,0:19:28.68:0,29,378	0/0:10,0:10:7.46:0,7,112	0/0:2,0:1:3.01:0,3,32
chr10	41477413	.	GTGTGTGTGTGTGT	G	664.85	PASS	AB=0.907;AC=7;AF=0.125;AN=56;BaseQRankSum=5.925;DP=493;FS=3.074;HRun=0;HaplotypeScore=210.8919;InbreedingCoeff=0.4846;MQ=47.83;MQ0=11;MQRankSum=-4.721;QD=11.08;ReadPosRankSum=-1.091;VQSLOD=2.6812;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:35.14:0,35,1006	0/0:13,0:13:36.12:0,36,2013	0/0:23,0:8:21.06:0,21,385	0/1:17,0:8:6.63:7,0,487	0/0:21,0:21:29.34:0,29,761	0/0:26,0:26:42.14:0,42,903	0/0:25,0:23:40:0,40,772	0/0:17,0:17:42.07:0,42,714	1/1:5,4:9:6.09:334,6,0	0/0:22,0:21:59.69:0,60,2888	0/0:21,0:21:63.22:0,63,3163	0/0:21,0:20:39.13:0,39,980	0/1:8,5:13:1.96:300,0,2	0/0:20,0:20:42.11:0,42,881	0/0:13,0:13:33.10:0,33,1549	0/0:21,0:21:33.08:0,33,771	0/0:24,0:24:57.02:0,57,813	0/0:25,0:23:66.21:0,66,3117	0/0:6,0:4:9.02:0,9,179	0/0:13,0:13:5.97:0,6,45	0/0:10,0:10:12.04:0,12,282	1/1:7,4:11:12.03:111,12,0	0/0:12,0:11:21:0,21,490	0/0:25,0:25:24.21:0,24,598	0/0:27,0:27:78.27:0,78,4284	0/0:19,0:19:49.08:0,49,766	0/1:10,0:10:40.88:41,0,218	0/0:2,0:1:3.01:0,3,54
chr10	41477420	.	T	TAG	208.13	PASS	AB=0.892;AC=4;AF=0.074;AN=54;BaseQRankSum=6.489;DP=482;FS=0.000;HRun=0;HaplotypeScore=157.9160;InbreedingCoeff=0.3101;MQ=46.00;MQ0=13;MQRankSum=-5.373;QD=6.12;ReadPosRankSum=-1.563;VQSLOD=2.9983;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:29.08:0,29,375	0/0:13,0:13:36.04:0,36,461	0/0:19,0:2:6.02:0,6,92	0/0:17,0:8:6.12:0,6,203	0/0:24,0:24:38.99:0,39,504	0/0:27,0:27:41.92:0,42,442	0/0:26,0:24:41.68:0,42,466	0/0:14,0:14:8.04:0,8,250	0/1:10,1:11:52.67:61,0,53	0/0:19,0:18:51.13:0,51,786	0/0:20,0:20:57.18:0,57,871	0/0:20,0:19:32.87:0,33,334	0/1:11,2:13:13.96:169,0,14	0/0:21,0:21:41.86:0,42,430	0/0:13,0:13:33.09:0,33,490	0/0:18,0:18:22.73:0,23,227	0/0:23,0:23:43.52:0,44,377	0/0:25,0:22:63.19:0,63,927	0/0:6,0:3:6.02:0,6,86	0/0:11,0:11:8.75:0,9,81	0/0:11,0:11:11.58:0,12,182	1/1:9,1:10:8.94:86,9,0	0/0:12,0:11:11.07:0,11,168	0/0:24,0:24:17.18:0,17,210	0/0:26,0:26:72.21:0,72,1064	0/0:17,0:17:25.35:0,25,336	0/0:13,0:13:18.38:0,18,178	./.
chr10	41477423	.	GTGTGTGT	G	1740.23	PASS	AB=0.938;AC=19;AF=0.339;AN=56;BaseQRankSum=9.797;DP=464;FS=10.635;HRun=0;HaplotypeScore=161.9392;InbreedingCoeff=-0.1350;MQ=46.12;MQ0=13;MQRankSum=-7.742;QD=7.28;ReadPosRankSum=2.206;VQSLOD=1.8283;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:35.78:0,36,541	0/0:13,0:13:36.12:0,36,1103	0/0:19,0:1:3.01:0,3,45	0/0:15,0:6:11.61:0,12,245	0/1:22,0:22:26.16:26,0,157	0/1:24,0:24:73.52:100,0,74	0/1:26,0:24:65.61:66,0,209	0/1:10,3:13:57.19:134,0,57	0/1:11,0:11:7.16:136,0,7	0/0:20,0:19:52.06:0,52,1750	0/0:19,0:19:57.18:0,57,1814	0/1:19,0:18:35.77:36,0,103	0/1:13,0:13:31.20:97,0,31	0/1:21,1:22:99:117,0,123	0/0:13,0:13:33.10:0,33,946	0/0:17,0:17:21.03:0,21,351	0/1:23,0:23:40.63:342,0,41	0/0:27,0:24:66.22:0,66,1893	0/0:7,0:4:8.61:0,9,74	0/1:3,3:6:12.86:89,0,13	0/1:10,1:11:11.37:11,0,35	1/1:10,0:10:8.15:30,8,0	0/1:12,0:11:22.53:23,0,66	0/0:24,0:24:6.66:0,7,161	0/0:25,0:25:72.23:0,72,2428	1/1:7,7:14:2.43:444,2,0	0/1:9,2:11:52.01:234,0,52	1/1:1,1:1:2.97:20,3,0
chr10	41477434	.	TAG	T	675.77	PASS	AB=0.961;AC=14;AF=0.259;AN=54;BaseQRankSum=6.128;DP=449;FS=5.161;HRun=0;HaplotypeScore=137.2748;InbreedingCoeff=-0.1570;MQ=49.59;MQ0=9;MQRankSum=-6.417;QD=3.45;ReadPosRankSum=-1.685;VQSLOD=2.3918;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:20,4:25:99:147,0,130	0/1:13,0:13:31.28:31,0,454	./.	0/1:12,0:5:10.78:11,0,27	0/0:19,0:19:23.98:0,24,252	0/0:20,0:20:6.45:0,6,394	0/0:26,1:25:33.16:0,33,618	0/0:16,0:16:28.32:0,28,376	0/1:10,0:10:50.30:50,0,103	0/0:18,0:18:48.06:0,48,857	0/0:17,0:17:50.95:0,51,852	1/1:19,1:19:13.34:133,13,0	0/1:11,0:11:36.17:43,0,36	0/0:20,0:20:23.39:0,23,254	0/0:13,0:13:33.11:0,33,620	0/1:15,0:15:99:128,0,146	0/1:23,1:24:32.65:109,0,33	0/0:23,1:21:33.28:0,33,1033	0/1:6,1:4:45.24:45,0,104	0/0:7,0:7:15.04:0,15,208	0/0:12,0:12:20.01:0,20,314	0/1:10,0:10:5.64:6,0,13	0/1:8,1:9:7.92:33,0,8	0/1:27,1:28:51.90:68,0,52	0/0:23,0:23:30.92:0,31,1181	0/0:16,0:16:6.99:0,7,399	0/1:12,0:12:25.92:26,0,330	0/0:3,0:2:3.01:0,3,53
chr10	41477436	.	G	GGT	1661.86	PASS	AB=0.989;AC=21;AF=0.389;AN=54;BaseQRankSum=5.592;DP=460;FS=0.000;HRun=0;HaplotypeScore=141.4915;InbreedingCoeff=0.4929;MQ=49.44;MQ0=9;MQRankSum=-6.067;QD=7.55;ReadPosRankSum=-1.571;VQSLOD=2.7320;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:20,8:29:29.71:347,30,0	0/0:11,0:13:32.22:0,32,308	./.	0/0:12,0:5:8.32:0,8,43	0/0:20,0:20:23.86:0,24,176	0/0:20,0:20:13.19:0,13,143	0/0:27,0:25:30.99:0,31,180	0/1:17,0:17:21.24:83,0,21	0/1:11,0:11:10.92:98,0,11	0/1:17,1:18:12.61:13,0,285	0/0:15,0:16:32.82:0,33,320	1/1:12,7:19:20.95:277,21,0	1/1:11,0:11:4.99:133,5,0	0/0:19,0:19:32.76:0,33,235	0/0:14,0:14:26.91:0,27,266	1/1:13,2:15:11.97:138,12,0	1/1:25,0:25:34.66:282,35,0	0/0:24,0:21:47.47:0,47,532	0/1:10,0:7:9.52:10,0,32	0/0:7,0:7:14.48:0,14,87	0/0:13,0:13:0.41:0,0,67	1/1:10,0:10:4.56:39,5,0	1/1:3,5:10:8.06:101,8,0	1/1:12,16:28:13.16:308,13,0	0/0:23,0:23:58.80:0,59,587	0/1:16,0:16:19.55:20,0,107	0/0:12,0:12:25.42:0,25,143	0/0:3,0:2:2.90:0,3,16
chr10	41477454	.	C	CGT	1459.54	PASS	AB=1.000;AC=16;AF=0.286;AN=56;BaseQRankSum=4.261;DP=452;FS=1.189;HRun=0;HaplotypeScore=127.8400;InbreedingCoeff=0.4059;MQ=53.61;MQ0=2;MQRankSum=-3.390;QD=7.60;ReadPosRankSum=0.912;VQSLOD=3.4999;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,20:28:23.82:377,24,0	0/0:13,0:13:36.04:0,36,472	0/0:13,0:1:2.80:0,3,13	0/0:11,0:4:1.81:0,2,26	0/0:14,0:14:24.75:0,25,145	0/0:23,0:23:8.81:0,9,221	0/0:24,0:23:30.34:0,30,248	0/0:14,0:14:28.86:0,29,171	0/1:15,0:15:47.09:90,0,47	0/0:16,0:16:39.83:0,40,490	0/0:11,0:11:33.04:0,33,420	1/1:19,0:19:16.30:245,16,0	0/1:15,0:15:9.94:117,0,10	0/0:17,0:17:32.29:0,32,194	0/0:14,0:14:36.03:0,36,466	1/1:10,2:12:8.19:237,8,0	0/1:27,0:27:27.94:66,0,28	0/0:24,0:22:63.08:0,63,795	0/0:10,0:10:14.84:0,15,102	0/0:7,0:7:17.92:0,18,149	0/1:20,0:20:1.73:2,0,137	0/1:11,0:11:17.40:31,0,17	1/1:14,0:14:10.39:125,10,0	1/1:25,0:25:5.08:305,5,0	0/0:23,0:23:68.95:0,69,844	0/0:17,0:17:37.33:0,37,237	0/0:9,0:9:26.86:0,27,211	0/1:6,0:6:16.32:39,0,16
chr10	41478659	.	ATAG	A	3769.16	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=13.324;DP=725;FS=0.909;HRun=0;HaplotypeScore=112.7564;InbreedingCoeff=0.9770;MQ=81.42;MQ0=0;MQRankSum=-2.867;QD=40.53;ReadPosRankSum=3.190;VQSLOD=5.1073;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,38:39:99:1648,99,0	0/0:9,0:9:27.08:0,27,582	0/0:26,0:26:67.55:0,68,1238	0/0:15,0:15:8.51:0,9,491	0/0:25,0:25:75.24:0,75,1731	0/0:19,0:19:57.18:0,57,1326	0/0:27,0:27:81.28:0,81,1945	0/0:28,0:28:81.27:0,81,1864	0/0:23,0:23:69.24:0,69,1609	0/0:33,0:33:96.31:0,96,2162	0/0:22,0:22:66.23:0,66,1603	0/0:30,0:30:90.30:0,90,2131	0/0:38,0:38:99:0,114,2712	0/0:23,0:23:69.24:0,69,1667	0/0:35,0:34:99:0,105,2492	1/1:1,32:33:87.30:1448,87,0	0/0:18,0:18:54.19:0,54,1289	0/0:20,0:20:57.18:0,57,1334	0/0:25,0:25:72.23:0,72,1679	0/0:28,0:28:84.08:0,84,1959	0/0:36,0:36:99:0,108,2567	0/0:26,0:26:75.26:0,75,1762	0/0:15,0:15:45.14:0,45,1027	0/0:28,0:28:84.25:0,84,1989	1/1:2,19:21:42.10:673,42,0	0/0:32,0:32:90.31:0,90,2149	0/0:32,0:31:96.33:0,96,2228	0/0:19,0:19:57.20:0,57,1374
chr10	41480757	.	A	AGTGTGT	8304.31	PASS	AB=0.986;AC=32;AF=0.571;AN=56;BaseQRankSum=-6.919;DP=670;FS=1.001;HRun=0;HaplotypeScore=214.2683;InbreedingCoeff=0.6747;MQ=61.57;MQ0=3;MQRankSum=-5.605;QD=18.09;ReadPosRankSum=-4.250;VQSLOD=3.9040;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:44,0:48:3.20:3,0,972	0/0:1,0:10:27.09:0,27,377	0/1:24,0:20:0.82:1,0,43	0/0:28,0:22:3:0,3,60	0/0:17,0:17:33.10:0,33,623	1/1:25,5:31:31.89:851,32,0	1/1:20,5:26:22.80:564,23,0	0/0:13,0:28:13.51:0,14,159	1/1:13,8:21:30:893,30,0	1/1:17,12:33:48.07:1104,48,0	1/1:9,1:10:2.91:97,3,0	1/1:13,13:28:33.03:1050,33,0	1/1:10,7:18:21.07:658,21,0	0/0:19,0:20:27.98:0,28,533	1/1:16,14:32:27.08:804,27,0	0/1:32,1:35:22.14:22,0,1345	1/1:12,3:16:8.21:291,8,0	1/1:16,3:20:24.02:458,24,0	0/0:12,0:22:25.45:0,25,250	0/0:4,0:19:27.98:0,28,365	0/0:16,0:29:9.03:0,9,123	1/1:9,9:18:12.01:389,12,0	1/1:6,8:17:11.83:330,12,0	1/1:12,11:25:10.28:177,10,0	1/1:7,12:19:15.02:473,15,0	0/1:15,1:36:99:140,0,468	0/0:11,0:27:38.13:0,38,504	0/0:5,0:10:12.04:0,12,166
chr10	41480802	.	GTGTAT	G	440.94	PASS	AB=0.595;AC=3;AF=0.054;AN=56;BaseQRankSum=1.721;DP=748;FS=1.242;HRun=0;HaplotypeScore=229.4039;InbreedingCoeff=0.8514;MQ=66.11;MQ0=15;MQRankSum=-1.475;QD=8.82;ReadPosRankSum=0.635;VQSLOD=2.6507;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:83.33:0,83,2271	0/0:16,0:16:39.13:0,39,1151	0/0:53,0:31:54.10:0,54,1179	0/0:83,0:37:72.47:0,72,1648	0/0:22,0:22:57.20:0,57,1593	1/1:5,20:25:25.68:534,26,0	0/1:8,17:24:0.40:0,0,1	0/0:37,0:36:78.23:0,78,2025	0/0:20,0:20:39.39:0,39,926	0/0:22,0:22:57.19:0,57,1579	0/0:16,0:16:41.63:0,42,1115	0/0:30,0:30:61.32:0,61,1524	0/0:28,0:28:72.21:0,72,2054	0/0:22,0:22:54.19:0,54,1524	0/0:27,0:26:49.23:0,49,1121	0/0:35,0:35:81.28:0,81,2266	0/0:19,0:19:42.84:0,43,1097	0/0:9,0:9:21.05:0,21,538	0/0:20,0:20:42.14:0,42,1172	0/0:25,0:25:51.94:0,52,1289	0/0:33,0:33:52.59:0,53,1205	0/0:20,0:20:47.08:0,47,1075	0/0:22,0:22:44.19:0,44,1073	0/0:19,0:19:30.46:0,30,649	0/0:22,0:21:40.38:0,40,1143	0/0:25,0:25:57.20:0,57,1618	0/0:26,0:26:49.38:0,49,1342	0/0:7,0:7:12.51:0,13,359
chr10	41481071	.	G	GCCAT	8735.94	PASS	AB=0.922;AC=27;AF=0.482;AN=56;BaseQRankSum=-6.351;DP=815;FS=11.449;HRun=0;HaplotypeScore=187.8599;InbreedingCoeff=0.7731;MQ=65.68;MQ0=6;MQRankSum=-3.296;QD=20.80;ReadPosRankSum=-0.784;VQSLOD=3.8218;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:48,0:48:22.83:984,23,0	0/0:10,0:10:21.07:0,21,335	0/0:49,0:34:30.45:0,30,582	0/0:39,0:28:37.77:0,38,574	0/0:12,0:12:14.73:0,15,141	1/1:26,0:26:22.37:763,22,0	1/1:25,0:25:13.98:241,14,0	1/1:35,0:35:8.26:166,8,0	1/1:36,0:36:34.54:1242,35,0	0/0:33,0:33:17.64:0,18,426	0/0:9,0:9:12.50:0,12,121	0/0:42,0:42:80.69:0,81,655	1/1:30,0:30:51.88:1124,52,0	0/0:35,0:35:15.41:0,15,375	0/0:36,0:36:55.99:0,56,561	1/1:32,0:32:53.64:1199,54,0	0/0:34,0:34:32.07:0,32,280	0/1:14,0:14:0.27:0,0,210	1/1:20,0:18:8.06:158,8,0	1/1:30,0:29:25.78:472,26,0	0/0:38,0:38:40.42:0,40,603	1/1:16,0:16:7.12:125,7,0	0/0:16,0:16:8.29:0,8,73	0/0:42,0:42:60.20:0,60,489	0/1:23,0:23:9.66:10,0,260	1/1:38,0:38:47.61:895,48,0	0/1:23,10:32:23.79:687,0,24	1/1:14,0:14:36.93:670,37,0
chr10	41481089	.	CATCT	C	7978.78	PASS	AB=0.979;AC=30;AF=0.536;AN=56;BaseQRankSum=-14.527;DP=854;FS=10.364;HRun=0;HaplotypeScore=187.8810;InbreedingCoeff=-0.4517;MQ=58.38;MQ0=11;MQRankSum=-1.082;QD=10.81;ReadPosRankSum=-10.628;VQSLOD=0.5698;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:49,0:49:99:321,0,344	0/0:14,0:14:35.87:0,36,503	0/0:55,0:31:73.17:0,73,909	0/0:47,0:27:52.04:0,52,646	0/1:12,0:12:93.93:94,0,149	0/1:24,0:24:99:176,0,226	0/1:20,0:20:69.14:181,0,69	1/1:42,0:42:6.11:779,6,0	0/1:34,0:34:89.25:89,0,421	0/1:31,0:31:99:197,0,619	0/1:8,0:8:36.07:36,0,156	1/1:3,40:43:84.22:1523,84,0	0/1:30,0:30:99:127,0,346	0/1:34,0:34:99:187,0,598	0/1:36,0:36:99:311,0,732	0/1:29,0:29:99:161,0,353	1/1:7,32:39:27.43:695,27,0	0/1:9,13:22:83.61:84,0,270	0/1:19,0:16:44.19:239,0,44	0/1:21,0:20:99:123,0,107	0/1:46,1:47:99:415,0,808	0/1:15,0:15:60.98:99,0,61	1/1:2,17:19:13.21:193,13,0	1/1:2,39:41:63.08:1161,63,0	0/1:26,1:27:99:147,0,445	0/1:38,0:38:99:361,0,296	0/1:42,0:41:99:162,0,343	0/1:16,0:16:99:118,0,202
chr10	41481092	.	C	CCA	2829.29	PASS	AB=0.816;AC=12;AF=0.214;AN=56;BaseQRankSum=8.689;DP=860;FS=2.013;HRun=0;HaplotypeScore=183.7609;InbreedingCoeff=-0.2746;MQ=57.84;MQ0=12;MQRankSum=0.953;QD=8.35;ReadPosRankSum=6.725;VQSLOD=3.0640;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:37,11:48:99:285,0,388	0/0:13,0:13:36.12:0,36,584	0/0:54,0:29:70.23:0,70,1218	0/0:53,0:31:77.33:0,77,1198	0/0:12,0:12:29.59:0,30,213	0/1:15,8:23:63.67:242,0,64	0/1:19,1:20:17.79:18,0,250	0/0:45,0:45:99:0,101,780	0/1:21,13:34:91:505,0,91	0/0:29,0:29:64.30:0,64,442	0/0:8,0:8:23.46:0,23,141	0/0:41,0:41:77.25:0,77,349	0/1:19,11:30:99:404,0,163	0/0:34,0:35:62.47:0,62,513	0/0:37,0:37:99:0,109,693	0/1:20,10:30:99:492,0,116	0/0:37,0:37:47.50:0,48,280	0/0:21,0:21:29.13:0,29,180	0/1:23,1:21:19.33:19,0,209	0/1:16,7:22:99:166,0,121	0/0:49,0:49:99:0,112,823	0/1:14,1:15:25.25:25,0,125	0/0:18,0:18:10.05:0,10,41	0/0:40,0:40:57.86:0,58,256	0/0:28,0:28:45.96:0,46,363	0/1:32,4:36:99:314,0,298	0/1:31,9:39:99:236,0,300	0/1:9,7:16:50.51:274,0,51
chr10	41481093	.	T	TCC	2814.62	PASS	AB=0.841;AC=14;AF=0.250;AN=56;BaseQRankSum=8.232;DP=864;FS=1.099;HRun=1;HaplotypeScore=187.4025;InbreedingCoeff=-0.3156;MQ=57.74;MQ0=12;MQRankSum=3.667;QD=7.69;ReadPosRankSum=5.952;VQSLOD=0.2961;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:38,11:49:99:324,0,413	0/0:13,0:13:36.12:0,36,584	0/0:55,0:29:82.62:0,83,1261	0/0:54,0:31:74.82:0,75,1143	0/0:13,0:13:29.28:0,29,206	0/1:15,8:23:91.83:202,0,92	0/1:19,1:20:39.90:40,0,240	0/0:44,0:44:42.48:0,42,658	0/1:21,13:34:99:454,0,128	0/0:29,0:29:80.89:0,81,450	0/1:8,0:8:1.48:1,0,98	0/0:41,0:41:77.25:0,77,349	0/1:20,11:31:99:382,0,180	0/0:35,0:35:85.47:0,85,545	0/0:37,0:37:81.84:0,82,644	0/1:22,10:32:99:532,0,126	0/0:38,0:38:31.54:0,32,250	0/0:21,0:21:29.06:0,29,175	0/1:24,1:22:99:104,0,203	0/1:15,7:21:99:193,0,103	0/0:49,0:49:92.39:0,92,784	0/1:14,1:15:47.22:47,0,120	0/1:18,0:18:5.17:5,0,24	0/0:41,0:41:58.33:0,58,257	0/0:28,0:28:9.67:0,10,314	0/1:32,4:36:99:234,0,334	0/1:30,8:38:99:237,0,299	0/1:7,7:14:80.14:211,0,80
chr10	41481095	.	T	TCCAT	8412.85	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=-7.064;DP=868;FS=1.748;HRun=0;HaplotypeScore=198.8966;InbreedingCoeff=0.6144;MQ=57.06;MQ0=12;MQRankSum=-3.119;QD=17.00;ReadPosRankSum=-3.078;VQSLOD=4.1947;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:49,0:49:59.36:1011,59,0	0/0:13,0:13:27.09:0,27,411	0/0:57,0:32:25.54:0,26,327	0/1:51,0:28:25.41:25,0,412	0/0:13,0:13:12:0,12,123	1/1:23,0:23:15.61:727,16,0	1/1:21,0:21:11.97:197,12,0	1/1:48,0:48:17.93:137,18,0	1/1:27,6:34:2.52:1129,3,0	0/0:27,0:27:50.69:0,51,467	0/1:8,0:8:9.97:10,0,105	0/0:41,0:41:80.81:0,81,667	1/1:32,0:32:47.57:1053,48,0	0/0:36,0:36:38.47:0,38,401	0/0:38,0:38:27.75:0,28,507	1/1:33,0:33:57.64:1223,58,0	0/0:38,0:38:18.80:0,19,266	0/0:21,0:21:8.29:0,8,215	1/1:24,0:21:21.85:232,22,0	1/1:22,0:21:27.06:492,27,0	0/0:48,0:48:23.16:0,23,582	1/1:15,0:15:10.53:151,11,0	0/1:21,0:21:4.34:4,0,62	0/0:41,0:41:59.38:0,59,488	0/1:27,0:27:21.58:22,0,260	1/1:34,0:34:39.25:756,39,0	0/1:40,0:39:54.13:686,0,54	1/1:13,0:13:24.55:557,25,0
chr10	41481168	.	CCTCA	C	1857.63	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.491;DP=926;FS=6.732;HRun=0;HaplotypeScore=203.2005;InbreedingCoeff=0.9995;MQ=73.63;MQ0=0;MQRankSum=-1.676;QD=29.96;ReadPosRankSum=-0.867;VQSLOD=2.6781;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:60,0:60:99:0,178,4464	0/0:18,0:18:48.16:0,48,1247	0/0:31,0:30:64.88:0,65,1139	0/0:47,0:44:29.08:0,29,1527	1/1:4,20:24:51.04:809,51,0	0/0:26,0:26:75.24:0,75,1843	0/0:25,0:25:69.24:0,69,1781	0/0:28,0:28:63.22:0,63,1485	0/0:34,0:34:99:0,99,2477	0/0:39,0:39:99:0,111,2758	0/0:28,0:28:78.27:0,78,1959	0/0:26,0:26:54.19:0,54,1398	0/0:29,0:29:78.27:0,78,1903	1/1:8,30:38:65.59:1170,66,0	0/0:49,0:49:99:0,135,3333	0/0:28,0:28:81.28:0,81,2057	0/0:34,0:34:45.43:0,45,1750	0/0:18,0:18:36.12:0,36,935	0/0:34,0:34:99:0,99,2276	0/0:27,0:27:70.12:0,70,1741	0/0:59,0:59:99:0,157,3955	0/0:42,0:42:99:0,111,2767	0/0:36,0:36:92.13:0,92,2341	0/0:39,0:39:87.30:0,87,2202	0/0:33,0:33:75.26:0,75,1908	0/0:37,0:37:99:0,102,2614	0/0:25,0:25:60.19:0,60,1449	0/0:12,0:12:36.12:0,36,914
chr10	41481176	.	ACTC	A	262.79	PASS	AB=0.948;AC=4;AF=0.071;AN=56;BaseQRankSum=10.181;DP=909;FS=8.319;HRun=0;HaplotypeScore=188.1916;InbreedingCoeff=0.4090;MQ=72.59;MQ0=0;MQRankSum=-1.465;QD=2.68;ReadPosRankSum=0.066;VQSLOD=2.0465;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:62,0:62:99:0,187,4431	0/0:17,0:17:48.16:0,48,1183	0/0:28,1:29:28.72:0,29,1377	0/1:38,4:38:66.52:67,0,1561	1/1:22,0:22:7.51:99,8,0	0/0:26,0:26:75.26:0,75,1802	0/0:26,0:26:75.26:0,75,1782	0/0:23,0:23:69.23:0,69,1604	0/0:37,0:37:99:0,108,2569	0/0:42,0:42:99:0,120,2774	0/0:26,0:26:78.27:0,78,1903	0/0:24,0:24:63.22:0,63,1457	0/0:30,0:30:90.31:0,90,2060	0/1:33,0:33:16.52:205,0,17	0/0:49,0:49:99:0,148,3478	0/0:31,0:31:93.32:0,93,2188	0/0:32,0:32:75.12:0,75,1753	0/0:23,0:23:54.18:0,54,1153	0/0:34,0:35:99:0,102,2166	0/0:24,0:24:71.61:0,72,1692	0/0:54,0:54:99:0,162,3831	0/0:44,0:44:99:0,126,3021	0/0:36,0:36:99:0,102,2352	0/0:38,0:38:93.32:0,93,2204	0/0:29,0:29:75.24:0,75,1796	0/0:36,0:36:99:0,105,2508	0/0:22,0:22:63.22:0,63,1472	0/0:16,0:16:48.16:0,48,1077
chr10	41481415	.	GTCCA	G	5319.94	PASS	AB=0.690;AC=35;AF=0.700;AN=50;BaseQRankSum=9.022;DP=848;FS=4.450;HRun=0;HaplotypeScore=165.4064;InbreedingCoeff=0.7872;MQ=64.65;MQ0=7;MQRankSum=-4.871;QD=9.55;ReadPosRankSum=1.332;VQSLOD=4.1552;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:39:17.61:150,18,0	0/0:12,0:12:15.04:0,15,219	./.	./.	0/0:21,0:21:27.09:0,27,551	1/1:11,0:24:30.03:279,30,0	1/1:19,0:32:6.01:56,6,0	./.	1/1:24,0:49:51.07:488,51,0	1/1:29,10:39:30.08:434,30,0	1/1:11,6:16:12.04:184,12,0	0/0:40,0:40:57.20:0,57,1330	1/1:28,0:51:33.04:315,33,0	0/0:45,0:45:75.26:0,75,1655	1/1:26,27:53:63.21:967,63,0	1/1:13,0:31:24.03:223,24,0	0/0:24,0:24:35.96:0,36,720	0/1:11,9:20:15.17:298,0,15	1/1:15,4:18:15.05:230,15,0	1/1:10,9:18:12.04:184,12,0	1/1:39,15:53:30.10:460,30,0	1/1:16,0:24:21:188,21,0	0/0:32,0:32:30.10:0,30,663	0/0:39,1:40:2.12:0,2,977	1/1:14,0:26:7.12:81,7,0	1/1:15,10:23:21.07:322,21,0	1/1:17,12:29:26.96:414,27,0	1/1:5,1:6:3.01:46,3,0
chr10	41481970	.	T	TG	9885.30	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=10.254;DP=653;FS=14.085;HRun=5;HaplotypeScore=85.1857;InbreedingCoeff=0.9976;MQ=83.32;MQ0=0;MQRankSum=-3.283;QD=34.56;ReadPosRankSum=0.009;VQSLOD=3.4936;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,123,1306	0/0:9,0:9:27.07:0,27,290	0/0:23,0:23:63.13:0,63,662	0/0:23,0:23:63.07:0,63,654	0/0:24,0:24:66.16:0,66,706	0/0:24,0:24:69.17:0,69,741	0/0:17,0:17:45.10:0,45,476	1/1:2,26:28:78.18:940,78,0	0/0:18,0:18:54.14:0,54,579	1/1:4,28:32:87.22:1093,87,0	1/1:0,20:20:54.18:709,54,0	0/0:25,0:25:72.17:0,72,767	0/0:24,0:24:69.15:0,69,732	0/0:22,0:22:63.15:0,63,670	1/1:1,22:23:54.18:710,54,0	0/0:20,0:20:57.14:0,57,612	0/0:23,0:23:69.17:0,69,741	1/1:0,20:20:51.17:668,51,0	1/1:3,31:34:93.25:1152,93,0	1/1:1,29:30:87.28:1142,87,0	1/1:2,23:25:63.20:828,63,0	0/0:23,0:23:60.12:0,60,628	0/0:21,0:21:60.14:0,60,636	0/0:25,0:25:75.12:0,75,783	1/1:2,18:20:51.17:671,51,0	1/1:2,22:25:72.17:909,72,0	1/1:1,22:23:66.21:866,66,0	1/1:0,5:5:15.05:197,15,0
chr10	41483489	.	T	TACACAGAC	4528.09	PASS	AB=0.951;AC=21;AF=0.375;AN=56;BaseQRankSum=-5.411;DP=560;FS=4.526;HRun=0;HaplotypeScore=157.2043;InbreedingCoeff=0.4509;MQ=63.70;MQ0=14;MQRankSum=-1.833;QD=15.94;ReadPosRankSum=-0.612;VQSLOD=3.7746;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:24:31.64:0,32,285	0/0:10,0:10:23.85:0,24,313	0/1:12,0:8:5.98:6,0,126	0/0:27,0:20:50.91:0,51,494	0/0:9,0:20:24.39:0,24,302	0/1:13,0:26:99:222,0,148	0/0:17,0:22:22.82:0,23,231	1/1:33,0:32:71.07:713,71,0	0/0:10,0:17:31.94:0,32,338	0/1:13,0:14:99:116,0,160	0/1:22,0:23:85.39:85,0,412	0/0:11,0:17:23.96:0,24,252	0/0:8,0:18:29.94:0,30,364	0/0:14,0:15:32.65:0,33,343	0/1:21,0:20:99:174,0,311	0/0:5,0:16:28.86:0,29,443	0/0:22,0:26:42.59:0,43,898	0/1:18,0:19:99:186,0,173	1/1:14,3:16:41.13:814,41,0	1/1:2,12:23:5.84:33,6,0	1/1:15,0:15:14.97:123,15,0	0/0:10,0:17:32.20:0,32,348	0/0:15,0:21:39.01:0,39,482	0/0:12,0:22:26.92:0,27,252	0/1:21,0:21:99:128,0,332	1/1:4,13:23:60.02:1172,60,0	1/1:4,16:22:11.81:403,12,0	1/1:6,0:9:18.02:351,18,0
chr10	41485396	.	C	CAAA	33799.11	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-8.700;DP=598;FS=5.022;HRun=0;HaplotypeScore=78.6573;InbreedingCoeff=0.9953;MQ=88.23;MQ0=0;MQRankSum=-10.657;QD=62.59;ReadPosRankSum=4.664;VQSLOD=6.8909;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,37:39:99:2457,108,0	0/0:8,0:8:18.06:0,18,323	0/0:25,0:25:75.24:0,75,1362	0/0:25,0:25:58.95:0,59,1106	1/1:2,18:20:60.12:1233,60,0	1/1:1,21:23:69.24:1625,69,0	1/1:0,25:26:66.23:1592,66,0	1/1:5,18:24:69.24:1652,69,0	1/1:0,20:20:57.20:1353,57,0	1/1:1,21:23:66.23:1603,66,0	1/1:0,16:17:48.08:1057,48,0	1/1:2,21:24:69.24:1631,69,0	1/1:1,17:18:51.17:1223,51,0	1/1:0,20:20:51.17:1222,51,0	1/1:1,20:21:54.18:1263,54,0	1/1:1,17:18:54.19:1330,54,0	1/1:1,38:40:99:2350,99,0	1/1:0,16:16:39.09:873,39,0	1/1:3,7:10:27.09:644,27,0	1/1:1,18:23:63.08:1391,63,0	1/1:2,25:29:69.24:1683,69,0	1/1:0,16:17:45.02:947,45,0	1/1:1,10:12:24.35:592,24,0	1/1:0,20:21:51.04:1257,51,0	1/1:0,16:16:42.14:1035,42,0	1/1:2,29:31:87.77:2109,88,0	1/1:4,14:22:51.13:1089,51,0	1/1:1,9:10:24.08:592,24,0
chr10	41486488	.	T	TCACA	2456.49	PASS	AB=0.693;AC=42;AF=0.875;AN=48;BaseQRankSum=-0.209;DP=565;FS=1.493;HRun=0;HaplotypeScore=117.9688;InbreedingCoeff=0.2396;MQ=67.79;MQ0=14;MQRankSum=-0.912;QD=5.57;ReadPosRankSum=-1.331;VQSLOD=2.5172;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:37,0:37:12.04:219,12,0	./.	./.	./.	./.	1/1:18,0:17:9.03:152,9,0	1/1:22,0:28:11.70:189,12,0	1/1:11,0:11:1.72:4,2,0	0/1:12,0:19:26.51:27,0,34	1/1:19,0:19:11.98:113,12,0	1/1:8,0:11:2.74:12,3,0	1/1:17,0:18:9.01:173,9,0	0/0:8,0:8:3.01:0,3,46	1/1:12,0:16:5.49:24,5,0	1/1:20,3:33:3.01:70,3,0	1/1:19,0:20:12.04:244,12,0	0/0:19,0:22:12.48:0,12,112	1/1:9,8:20:6.02:140,6,0	1/1:15,0:15:8.31:140,8,0	1/1:15,0:14:5.99:62,6,0	1/1:29,0:26:6.02:129,6,0	0/1:9,0:19:32.04:34,0,32	1/1:8,0:8:6.02:82,6,0	1/1:32,0:32:9.03:201,9,0	1/1:10,4:15:5.54:123,6,0	1/1:27,0:27:22.66:325,23,0	1/1:20,0:20:4.63:26,5,0	1/1:7,0:7:6.02:90,6,0
chr10	41486930	.	C	CT	11203.39	PASS	AB=0.810;AC=50;AF=0.893;AN=56;BaseQRankSum=-4.468;DP=621;FS=3.215;HRun=10;HaplotypeScore=73.1380;InbreedingCoeff=0.7708;MQ=78.78;MQ0=1;MQRankSum=-3.033;QD=18.83;ReadPosRankSum=2.751;VQSLOD=5.9029;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,32:37:87.22:928,87,0	0/0:8,0:8:20.96:0,21,172	0/0:16,0:18:37:0,37,277	0/1:13,0:13:1.10:1,0,83	1/1:2,29:31:78.16:819,78,0	1/1:3,0:30:62.53:313,63,0	1/1:4,0:17:28.48:143,28,0	1/1:9,16:25:48.54:499,49,0	1/1:2,0:24:59.79:300,60,0	1/1:7,30:37:87.22:925,87,0	1/1:2,21:23:38.48:601,38,0	1/1:3,0:13:20.05:106,20,0	1/1:1,0:18:45.43:226,45,0	1/1:3,17:21:47.95:494,48,0	1/1:2,18:20:45.11:480,45,0	1/1:5,20:25:54.14:576,54,0	1/1:7,0:26:56.90:288,57,0	0/1:5,8:13:0.62:189,0,1	1/1:5,10:16:11.27:302,11,0	1/1:5,21:26:13.87:546,14,0	1/1:8,19:27:35.51:583,36,0	1/1:2,0:16:37.03:186,37,0	1/1:3,1:22:42.82:215,43,0	1/1:0,2:10:25.90:164,26,0	1/1:8,29:38:59.49:821,59,0	1/1:2,15:17:20.47:423,20,0	1/1:4,32:37:43.76:850,44,0	1/1:3,9:12:21.05:224,21,0
chr10	41488683	.	TATACATACAC	T	19791.08	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=18.476;DP=722;FS=0.612;HRun=0;HaplotypeScore=224.8747;InbreedingCoeff=0.9684;MQ=67.62;MQ0=0;MQRankSum=-16.202;QD=62.63;ReadPosRankSum=-1.082;VQSLOD=4.4865;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:69.22:0,69,3247	0/0:16,0:16:42.13:0,42,1921	0/0:24,0:24:69.20:0,69,2701	0/0:24,0:23:60.09:0,60,2103	0/0:40,0:40:99:0,120,5804	0/0:30,0:30:87.27:0,87,3995	0/0:17,0:17:42.12:0,42,1831	1/1:4,31:35:92.91:1892,93,0	0/0:20,0:20:57.20:0,57,2929	1/1:4,36:40:99:2641,102,0	1/1:1,24:25:54.66:1710,55,0	0/0:23,0:23:69.24:0,69,3603	0/0:28,0:28:84.27:0,84,4146	0/0:26,0:26:75.21:0,75,3552	1/1:1,29:30:63.22:2069,63,0	0/0:21,0:21:63.19:0,63,2859	0/0:12,0:12:36.10:0,36,1741	1/1:1,8:9:6.02:177,6,0	1/1:2,15:17:45.04:1042,45,0	1/1:0,24:24:48.03:1320,48,0	1/1:2,13:15:15.05:472,15,0	0/0:36,0:36:99:0,105,4657	0/0:38,0:38:99:0,108,5343	0/0:27,0:27:69.24:0,69,3221	1/1:0,40:40:99:3246,99,0	1/1:1,36:37:99:2864,105,0	1/1:2,33:35:66.23:2162,66,0	1/1:0,9:9:6.02:197,6,0
chr10	41489068	.	GA	G	5931.01	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-4.228;DP=609;FS=4.935;HRun=10;HaplotypeScore=79.6849;InbreedingCoeff=0.9874;MQ=80.34;MQ0=0;MQRankSum=-0.820;QD=21.41;ReadPosRankSum=3.445;VQSLOD=5.8175;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,20:22:23.81:436,24,0	0/0:10,0:10:24.06:0,24,266	0/0:22,0:22:41.07:0,41,416	0/0:20,0:19:35.39:0,35,335	1/1:5,29:34:77.96:677,78,0	1/1:0,28:28:80.98:703,81,0	1/1:4,13:17:29.98:260,30,0	0/0:37,0:37:81.21:0,81,890	1/1:1,13:14:35.99:313,36,0	0/0:6,0:30:74.62:0,75,424	0/0:6,0:29:68.62:0,69,364	1/1:0,18:18:44.99:391,45,0	1/1:3,18:21:47.89:417,48,0	1/1:0,15:15:38.99:339,39,0	0/0:3,0:23:48.42:0,48,247	1/1:1,11:12:29.99:260,30,0	1/1:2,21:23:53.99:469,54,0	0/0:3,0:12:25.69:0,26,133	0/0:21,0:21:54.10:0,54,576	0/0:23,0:24:62.96:0,63,664	0/0:12,1:13:7.49:0,7,298	1/1:2,23:25:68.97:599,69,0	1/1:0,30:30:83.98:729,84,0	1/1:3,15:18:38.99:339,39,0	0/0:4,0:29:59.66:0,60,298	0/0:35,1:36:76.21:0,76,1062	0/0:18,1:19:25.08:0,25,505	0/0:7,0:7:21.06:0,21,232
chr10	41490087	.	G	GAA	3034.02	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=-6.212;DP=609;FS=4.800;HRun=9;HaplotypeScore=81.5639;InbreedingCoeff=0.8709;MQ=65.34;MQ0=9;MQRankSum=0.692;QD=26.61;ReadPosRankSum=1.391;VQSLOD=3.7334;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,25:32:68.68:998,69,0	0/0:6,0:6:18.05:0,18,192	0/0:30,0:12:23.88:0,24,238	0/0:25,0:17:32.09:0,32,326	1/1:2,18:23:59.64:822,60,0	0/0:16,0:16:36.08:0,36,383	0/0:16,0:16:33.05:0,33,351	0/0:27,0:26:43.89:0,44,497	0/0:22,0:22:51.10:0,51,543	0/0:26,0:27:71.70:0,72,746	0/0:21,0:21:54.08:0,54,556	0/0:11,0:11:26.66:0,27,287	0/0:12,0:11:30.08:0,30,319	1/1:4,13:17:30.10:462,30,0	0/0:19,0:19:51.11:0,51,542	1/1:7,21:27:61.14:905,61,0	0/0:36,0:37:86.94:0,87,906	0/0:26,0:26:57.41:0,57,680	0/0:22,0:22:53.67:0,54,552	0/0:24,0:24:62.85:0,63,705	0/0:18,0:19:42.04:0,42,502	0/0:16,0:16:30.05:0,30,319	0/0:16,0:16:39.07:0,39,411	0/0:34,0:33:87.18:0,87,916	0/0:18,0:20:29.74:0,30,355	0/0:20,0:20:57.11:0,57,592	0/0:25,0:25:60.08:0,60,629	0/1:14,0:14:12.37:12,0,309
chr10	41491023	.	TTCTC	T	1849.80	PASS	AB=1.000;AC=25;AF=0.500;AN=50;BaseQRankSum=-1.706;DP=570;FS=9.483;HRun=0;HaplotypeScore=115.0242;InbreedingCoeff=0.7185;MQ=70.18;MQ0=20;MQRankSum=0.866;QD=7.77;ReadPosRankSum=-0.713;VQSLOD=1.3092;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:30.56:0,31,497	0/0:11,0:11:10.46:0,10,156	./.	./.	0/0:16,0:29:3:0,3,25	0/0:27,0:25:33.10:0,33,516	0/1:29,0:27:21:21,0,301	1/1:20,6:25:18.50:210,18,0	0/0:30,0:29:34.91:0,35,486	1/1:14,0:15:18.36:197,18,0	1/1:12,0:15:12.04:154,12,0	0/0:14,0:13:18.50:0,19,297	0/0:21,0:21:23.72:0,24,293	0/0:16,0:21:9.03:0,9,155	./.	0/0:24,0:24:21.54:0,22,387	0/0:20,0:19:9.50:0,10,122	1/1:3,0:6:6.02:68,6,0	1/1:17,0:17:8.96:132,9,0	1/1:22,0:21:0.47:1,0,0	1/1:31,0:31:45.15:644,45,0	1/1:16,0:17:5.66:85,6,0	0/0:11,0:11:9.49:0,9,111	0/0:19,0:17:22.34:0,22,390	1/1:14,0:16:8.76:87,9,0	1/1:5,9:13:27.08:360,27,0	1/1:19,0:19:2.74:39,3,0	1/1:9,0:6:3.01:38,3,0
chr10	41491051	.	CTCTCTCTCTGTGTGTG	C	2301.15	PASS	AB=1.000;AC=17;AF=0.340;AN=50;BaseQRankSum=-0.794;DP=579;FS=1.966;HRun=0;HaplotypeScore=220.3535;InbreedingCoeff=-0.0046;MQ=47.52;MQ0=34;MQRankSum=0.588;QD=7.62;ReadPosRankSum=-2.322;VQSLOD=2.5313;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:26:49.05:0,49,2282	0/0:11,0:11:24.07:0,24,870	./.	./.	0/0:29,0:29:15.04:0,15,402	0/0:27,0:24:12.58:0,13,1250	0/1:32,0:27:3.39:3,0,678	0/1:27,0:25:3.12:3,0,234	0/1:30,0:29:17.93:18,0,1012	0/1:24,0:23:55.26:735,0,55	1/1:16,0:15:12.04:302,12,0	0/0:17,0:15:17.25:0,17,900	0/1:23,0:23:99:324,0,580	0/0:25,0:25:30.10:0,30,1323	./.	0/0:15,0:13:22.63:0,23,876	0/1:21,0:19:99:126,0,305	1/1:10,0:9:10.95:282,11,0	0/1:15,0:15:35.15:35,0,96	0/0:23,0:21:1.08:0,1,2	0/1:38,0:35:99:211,0,116	0/1:17,0:16:81.81:82,0,286	0/0:19,0:18:11.73:0,12,324	0/0:26,0:22:4.91:0,5,1316	1/1:16,0:16:8.97:163,9,0	0/1:17,0:15:43.18:43,0,181	0/0:30,0:29:10.04:0,10,63	0/1:16,0:11:99:129,0,136
chr10	41491055	.	CTCTCTGTGTG	C	3771.21	PASS	AB=1.000;AC=29;AF=0.580;AN=50;BaseQRankSum=-2.025;DP=579;FS=1.066;HRun=0;HaplotypeScore=175.1166;InbreedingCoeff=0.1795;MQ=47.55;MQ0=33;MQRankSum=2.492;QD=8.96;ReadPosRankSum=-2.550;VQSLOD=2.4139;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:26:48.62:0,49,1345	0/0:12,0:12:25.51:0,26,623	./.	./.	0/0:29,0:29:18.05:0,18,376	0/1:28,0:25:52.24:52,0,569	0/1:31,0:26:99:135,0,289	1/1:23,0:21:18.34:209,18,0	0/1:31,0:30:6.57:7,0,445	0/1:23,0:22:12.31:376,0,12	1/1:20,0:19:15.01:145,15,0	0/1:17,0:15:42.37:42,0,343	0/1:23,0:23:99:218,0,246	0/0:27,0:27:30.10:0,30,884	./.	0/0:19,0:17:21.54:0,22,453	0/1:19,0:17:84.31:84,0,108	1/1:10,0:9:11.09:166,11,0	1/1:14,0:14:15.04:301,15,0	1/1:11,12:22:0.47:1,0,0	1/1:43,0:39:8.77:1095,9,0	1/1:16,0:15:5.70:77,6,0	0/0:18,0:17:8.80:0,9,111	0/1:25,0:21:99:125,0,498	1/1:14,0:14:8.67:78,9,0	1/1:17,0:15:29.72:420,30,0	1/1:7,22:28:2.68:99,3,0	0/1:15,0:10:22.75:139,0,23
chr10	41491059	.	CTGTGTGTGTGTGTGTG	C	858.68	PASS	AB=0.744;AC=5;AF=0.100;AN=50;BaseQRankSum=2.591;DP=588;FS=0.000;HRun=0;HaplotypeScore=229.3613;InbreedingCoeff=0.4481;MQ=47.11;MQ0=35;MQRankSum=-0.820;QD=12.63;ReadPosRankSum=-0.041;VQSLOD=1.8195;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:25:36.10:0,36,2192	0/0:12,0:12:24.08:0,24,1262	./.	./.	0/0:30,0:30:18.06:0,18,1135	0/0:28,0:25:15.52:0,16,497	0/0:31,0:25:12.93:0,13,371	0/0:25,0:23:29.54:0,30,343	0/1:19,8:28:16.32:123,0,16	0/0:17,0:22:38.47:0,38,571	0/0:15,0:20:8.60:0,9,130	0/0:18,0:16:30.10:0,30,915	1/1:11,11:23:1.86:746,2,0	0/0:27,0:27:30.10:0,30,1864	./.	0/0:12,0:19:9.03:0,9,329	0/0:17,0:16:8.95:0,9,94	0/0:11,0:10:15.17:0,15,122	0/0:12,0:14:9.50:0,10,172	0/0:24,0:23:1.27:0,1,4	0/0:45,0:41:35.06:0,35,1015	1/1:12,3:15:6.02:94,6,0	0/0:9,0:17:5.71:0,6,169	0/0:26,0:22:48.12:0,48,1526	0/0:7,0:13:5.97:0,6,35	0/0:18,0:16:18.06:0,18,366	0/0:30,0:29:9.96:0,10,185	0/0:8,0:11:15.01:0,15,323
chr10	41492861	.	TTCTCTCTCTC	T	1386.23	PASS	AB=1.000;AC=17;AF=0.425;AN=40;BaseQRankSum=2.172;DP=595;FS=33.065;HRun=0;HaplotypeScore=173.3554;InbreedingCoeff=0.5030;MQ=70.72;MQ0=26;MQRankSum=2.459;QD=8.35;ReadPosRankSum=3.220;VQSLOD=1.4331;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:22:9.50:0,10,360	0/0:7,0:7:3:0,3,25	./.	0/0:24,0:17:1.55:0,2,4	0/0:26,0:25:3.01:0,3,50	0/0:16,0:18:3:0,3,25	0/0:11,0:10:0.47:0,0,1	0/0:45,0:44:6.48:0,6,111	./.	1/1:23,4:27:12.04:263,12,0	./.	./.	1/1:16,1:16:6.02:165,6,0	1/1:14,0:14:2.60:23,3,0	./.	1/1:17,0:15:0.47:1,0,0	./.	1/1:17,0:16:15.84:369,16,0	1/1:13,0:13:2.74:12,3,0	0/0:29,0:29:3.01:0,3,47	0/0:23,0:22:9.01:0,9,260	1/1:19,1:22:9.03:263,9,0	./.	./.	1/1:23,0:23:15.05:386,15,0	0/0:28,0:27:17.54:0,18,446	0/0:36,0:36:10.25:0,10,586	0/1:14,0:12:40.84:41,0,123
chr10	41492906	.	TCTCTCTCTCA	T	2030.65	PASS	AB=1.000;AC=30;AF=0.625;AN=48;BaseQRankSum=1.067;DP=420;FS=2.320;HRun=0;HaplotypeScore=137.6224;InbreedingCoeff=0.3295;MQ=42.11;MQ0=49;MQRankSum=2.783;QD=6.70;ReadPosRankSum=0.790;VQSLOD=2.6231;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:17:86.61:87,0,330	./.	./.	./.	0/0:15,0:14:2.51:0,3,24	1/1:23,0:19:6.53:21,7,0	1/1:22,0:19:6.62:51,7,0	0/0:12,0:10:13.30:0,13,113	1/1:15,0:14:2.80:17,3,0	1/1:15,0:14:29.33:387,29,0	1/1:17,0:15:11.97:98,12,0	0/0:14,0:14:10.71:0,11,79	1/1:11,0:10:8.10:146,8,0	1/1:12,0:11:10.72:98,11,0	./.	1/1:12,0:10:18.59:143,19,0	0/0:17,0:12:12.49:0,12,78	1/1:16,0:12:7.03:384,7,0	1/1:5,0:3:2.59:35,3,0	0/1:22,0:22:9.36:9,0,20	0/1:14,0:12:0.52:1,0,181	1/1:28,0:28:8.87:192,9,0	0/0:27,0:23:25.38:0,25,200	0/0:20,0:16:8.83:0,9,72	1/1:17,0:17:9.75:375,10,0	0/1:20,0:18:65.96:66,0,318	0/1:23,0:22:22.95:23,0,430	0/1:8,0:5:62.98:63,0,140
chr10	41492914	.	TCACACACA	T	1429.51	PASS	AB=0.809;AC=18;AF=0.360;AN=50;BaseQRankSum=-0.937;DP=458;FS=12.431;HRun=0;HaplotypeScore=145.5231;InbreedingCoeff=0.2787;MQ=43.63;MQ0=48;MQRankSum=-0.338;QD=7.60;ReadPosRankSum=-0.275;VQSLOD=1.6741;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:20:21.97:0,22,279	0/0:2,0:2:2.86:0,3,57	./.	./.	1/1:7,0:12:0.47:1,0,0	1/1:22,0:18:11.76:302,12,0	0/1:13,1:22:90.18:132,0,90	0/1:9,0:7:20.98:30,0,21	1/1:6,12:17:2.47:72,2,0	0/0:21,0:20:34.12:0,34,483	0/0:21,0:19:21.07:0,21,381	0/0:15,0:15:15.02:0,15,417	0/1:7,6:12:12.31:74,0,12	0/0:12,0:11:8.55:0,9,45	./.	0/0:14,0:12:22.91:0,23,375	0/0:23,0:18:21.06:0,21,455	0/0:17,0:13:21.83:0,22,282	1/1:5,0:4:5.62:27,6,0	1/1:8,12:20:3.95:73,4,0	1/1:14,0:12:8.82:227,9,0	0/0:14,16:30:5.84:0,6,39	0/0:29,0:26:29.94:0,30,987	0/0:26,0:23:23.42:0,23,781	0/0:20,0:19:23.97:0,24,412	0/1:12,0:18:99:375,0,148	0/1:15,6:20:61.26:61,0,78	0/1:8,0:6:31.30:211,0,31
chr10	41493890	.	CA	C	7074.37	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=10.512;DP=822;FS=2.143;HRun=1;HaplotypeScore=85.7654;InbreedingCoeff=0.9995;MQ=87.86;MQ0=0;MQRankSum=-4.848;QD=35.55;ReadPosRankSum=-0.444;VQSLOD=4.7566;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,135,2029	0/0:15,0:15:45.14:0,45,697	0/0:34,0:34:96.19:0,96,1407	0/0:24,0:24:66.91:0,67,895	0/0:34,0:34:99:0,102,1509	0/0:22,0:22:66.23:0,66,1054	0/0:34,0:34:99:0,102,1598	1/1:0,35:35:99:1295,105,0	0/0:36,0:36:99:0,108,1702	0/0:39,0:39:99:0,117,1809	0/0:20,0:20:60.18:0,60,912	0/0:39,0:39:99:0,117,1759	0/0:30,0:30:90.25:0,90,1343	0/0:32,0:32:93.29:0,93,1437	0/0:32,0:32:96.29:0,96,1465	0/0:37,0:37:99:0,111,1749	0/0:31,0:31:93.30:0,93,1461	0/0:14,0:14:23.40:0,23,561	1/1:0,17:17:51.17:712,51,0	1/1:0,25:25:72.20:973,72,0	1/1:0,41:41:99:1423,102,0	0/0:30,0:30:87.27:0,87,1343	0/0:24,0:24:72.18:0,72,1056	0/0:28,0:28:84.25:0,84,1294	0/0:23,0:23:69.20:0,69,1054	1/1:1,32:33:45.02:1090,45,0	1/1:0,32:32:75.25:1039,75,0	1/1:0,16:16:39.13:543,39,0
chr10	41494204	.	TTATC	T	3755.75	PASS	AB=1.000;AC=39;AF=0.722;AN=54;BaseQRankSum=1.069;DP=449;FS=18.276;HRun=0;HaplotypeScore=135.2146;InbreedingCoeff=0.2786;MQ=70.20;MQ0=5;MQRankSum=-4.420;QD=10.73;ReadPosRankSum=3.217;VQSLOD=2.1763;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:24,2:26:8.45:79,8,0	0/0:5,0:5:14.99:0,15,226	0/0:39,0:23:36.27:0,36,496	0/0:33,0:15:19.24:0,19,297	0/1:18,0:18:51.51:170,0,52	0/1:13,0:13:50.84:51,0,141	0/1:17,0:17:87.10:139,0,87	1/1:20,0:19:50.27:330,50,0	1/1:12,0:12:17.94:171,18,0	1/1:16,0:16:44.85:464,45,0	./.	1/1:16,0:16:2.98:22,3,0	1/1:17,0:17:18.89:170,19,0	0/1:16,0:16:99:151,0,114	0/1:12,0:12:16.07:29,0,16	1/1:7,13:20:11.99:149,12,0	1/1:11,0:11:23.94:285,24,0	1/1:12,0:12:23.84:239,24,0	1/1:13,0:13:35.51:272,36,0	0/1:15,0:15:10.03:13,0,10	0/1:11,0:11:0:0,0,0	1/1:5,1:6:2.96:25,3,0	1/1:17,0:17:32.94:269,33,0	1/1:13,0:13:3.41:19,3,0	0/0:14,0:14:0:0,0,0	1/1:18,0:18:44.44:416,44,0	1/1:23,0:23:22.35:208,22,0	1/1:8,0:8:8.96:86,9,0
chr10	41494206	.	ATC	A	3600.65	PASS	AB=0.667;AC=28;AF=0.519;AN=54;BaseQRankSum=1.992;DP=451;FS=18.970;HRun=0;HaplotypeScore=127.1645;InbreedingCoeff=0.5545;MQ=69.52;MQ0=5;MQRankSum=-5.301;QD=14.64;ReadPosRankSum=1.923;VQSLOD=2.1585;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:3,0:23:6.58:7,0,18	0/0:5,0:5:14.94:0,15,223	0/0:38,0:22:49.61:0,50,724	0/0:33,0:15:21.05:0,21,499	0/0:18,0:18:10.94:0,11,137	0/0:17,0:17:14.50:0,14,128	0/0:18,0:18:14.41:0,14,123	1/1:0,19:18:54.16:746,54,0	1/1:10,0:12:2.89:17,3,0	1/1:5,11:16:48.11:660,48,0	./.	0/0:3,0:17:1.25:0,1,3	0/1:13,0:17:5.90:41,0,6	0/0:17,0:17:4.71:0,5,174	1/1:5,7:12:6.02:88,6,0	0/1:15,0:21:10.08:48,0,10	1/1:9,0:11:14.61:70,15,0	1/1:1,10:11:24.08:325,24,0	1/1:0,13:13:39.12:546,39,0	1/1:2,12:14:3.90:46,4,0	0/1:1,10:11:0:0,0,0	0/1:5,0:6:0:0,0,0	0/0:19,0:19:1.09:0,1,3	0/0:4,0:15:2.65:0,3,20	0/1:0,13:13:0:0,0,0	1/1:0,17:17:47.85:603,48,0	1/1:1,21:22:23.09:275,23,0	1/1:1,7:8:9.03:128,9,0
chr10	41494208	.	CTA	C	3160.59	PASS	AB=1.000;AC=41;AF=0.759;AN=54;BaseQRankSum=1.949;DP=452;FS=15.140;HRun=0;HaplotypeScore=129.0995;InbreedingCoeff=0.4037;MQ=67.99;MQ0=6;MQRankSum=-3.643;QD=8.88;ReadPosRankSum=2.708;VQSLOD=2.3500;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:24:8.86:63,9,0	0/0:5,0:5:5.84:0,6,150	0/0:38,0:22:36.25:0,36,441	0/0:32,0:14:19.23:0,19,293	1/1:19,0:19:8.05:212,8,0	0/1:18,0:18:1.03:97,0,1	1/1:18,0:18:24.45:202,24,0	1/1:19,0:18:50.27:330,50,0	1/1:11,1:12:17.97:154,18,0	1/1:17,0:17:44.51:312,45,0	./.	1/1:12,0:12:2.98:22,3,0	1/1:14,3:17:22.38:192,22,0	0/1:18,0:18:32.66:149,0,33	0/1:12,0:12:16.07:29,0,16	1/1:20,0:20:13.20:103,13,0	1/1:8,4:12:23.91:211,24,0	1/1:13,0:13:23.51:163,24,0	1/1:15,0:14:35.47:240,35,0	0/1:13,0:13:10.03:13,0,10	0/1:11,0:11:0:0,0,0	1/1:5,1:6:3:25,3,0	1/1:19,0:19:35.93:293,36,0	1/1:14,0:14:4.50:22,4,0	0/0:13,0:13:0:0,0,0	1/1:17,0:17:43.37:284,43,0	1/1:22,0:22:7.06:125,7,0	1/1:8,0:8:8.95:66,9,0
chr10	41494210	.	ATCTCTCTCTC	A	2736.20	PASS	AB=0.874;AC=23;AF=0.460;AN=50;BaseQRankSum=5.991;DP=459;FS=1.641;HRun=0;HaplotypeScore=170.1229;InbreedingCoeff=0.3680;MQ=66.30;MQ0=7;MQRankSum=-6.457;QD=12.22;ReadPosRankSum=3.025;VQSLOD=2.8256;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:23:2.70:76,3,0	0/0:5,0:6:15.05:0,15,561	0/0:39,0:22:21.07:0,21,593	0/0:32,0:13:3:0,3,149	0/0:21,0:21:24.08:0,24,871	0/0:18,0:18:18.53:0,19,777	0/0:19,0:19:21.53:0,22,765	1/1:18,0:17:1.64:19,2,0	1/1:14,0:13:2.88:43,3,0	1/1:7,9:17:33.11:909,33,0	./.	./.	0/1:20,0:20:11.56:12,0,339	0/0:18,0:18:21.07:0,21,805	./.	0/1:20,0:20:13.20:114,0,13	1/1:14,0:14:15.02:212,15,0	0/1:9,3:13:57.24:367,0,57	0/1:14,0:14:7.72:162,0,8	1/1:9,0:14:5.63:30,6,0	1/1:8,0:11:0.47:1,0,0	0/0:6,0:6:0:0,0,0	0/0:20,0:20:6.02:0,6,143	0/0:13,0:13:2.16:0,2,116	0/0:10,3:13:0:0,0,0	0/1:8,2:16:1.55:616,0,2	1/1:12,1:21:15.88:287,16,0	1/1:7,0:8:5.96:45,6,0
chr10	41494244	.	C	CTGTGTGTGTG	721.54	PASS	AB=0.984;AC=17;AF=0.304;AN=56;BaseQRankSum=3.727;DP=484;FS=4.008;HRun=0;HaplotypeScore=201.8208;InbreedingCoeff=0.1361;MQ=38.84;MQ0=13;MQRankSum=-1.213;QD=3.01;ReadPosRankSum=-1.768;VQSLOD=2.3756;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:33,0:33:15:155,15,0	0/0:5,0:5:15.04:0,15,349	0/1:15,0:4:0.82:1,0,93	0/0:25,0:6:8.02:0,8,310	0/1:15,0:16:24.50:24,0,389	0/0:22,0:22:32.97:0,33,476	0/0:21,0:21:4.04:0,4,469	0/0:20,0:18:21.88:0,22,306	1/1:12,12:25:5:25,5,0	0/0:24,0:23:24.16:0,24,681	0/0:7,0:7:15.04:0,15,285	0/1:12,0:12:1.48:1,0,47	1/1:26,0:26:34.32:557,34,0	0/0:17,0:17:6.50:0,6,260	0/0:19,0:19:17.71:0,18,417	0/1:18,0:18:16.22:16,0,101	0/1:6,0:15:6.07:6,0,64	0/1:15,0:14:8.18:8,0,539	0/1:18,0:16:53.84:54,0,108	0/0:21,0:19:14.15:0,14,195	1/1:15,0:13:0.47:1,0,0	0/0:8,0:8:0.47:0,0,1	0/1:10,0:11:14.87:15,0,95	0/0:15,0:14:9.29:0,9,93	0/0:10,0:10:15.04:0,15,302	0/0:24,0:24:1.26:0,1,373	0/1:19,0:19:6.40:6,0,432	0/0:6,0:5:0.29:0,0,32
chr10	41494246	.	GTA	G	2298.04	PASS	AB=0.993;AC=41;AF=0.732;AN=56;BaseQRankSum=1.131;DP=491;FS=6.421;HRun=0;HaplotypeScore=142.5545;InbreedingCoeff=0.2253;MQ=39.05;MQ0=14;MQRankSum=-1.166;QD=5.07;ReadPosRankSum=-1.020;VQSLOD=2.7146;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:31,0:31:2.90:17,3,0	0/0:5,0:5:11.75:0,12,147	0/1:15,0:4:0.82:1,0,40	0/1:27,0:8:9.17:9,0,171	0/1:16,0:16:12.82:152,0,13	1/1:19,3:22:5.45:246,5,0	1/1:21,0:21:27.40:362,27,0	1/1:21,0:19:32.08:233,32,0	1/1:26,0:25:6.71:35,7,0	1/1:25,0:24:48.55:321,49,0	1/1:7,0:7:3.88:27,4,0	0/1:15,0:15:0.76:18,0,1	0/1:26,0:26:21.18:33,0,21	0/1:17,0:17:35.76:65,0,36	0/0:17,2:19:0.31:0,0,1	1/1:19,0:19:15.24:101,15,0	1/1:16,0:15:14.73:91,15,0	1/1:16,0:15:20.13:110,20,0	1/1:18,0:16:33.54:216,34,0	1/1:21,0:19:2.74:12,3,0	0/1:15,0:13:0:0,0,0	0/1:8,0:8:0.28:0,0,0	0/1:10,0:10:0:0,0,0	0/0:14,0:13:3.06:0,3,19	1/1:10,1:11:3.76:19,4,0	1/1:22,2:24:43.29:271,43,0	1/1:19,0:19:7.65:77,8,0	1/1:6,0:5:2.94:18,3,0
chr10	41494493	.	CCTCCCCCTCCTCCCT	C	1734.47	PASS	AB=0.824;AC=12;AF=0.222;AN=54;BaseQRankSum=6.382;DP=434;FS=0.887;HRun=0;HaplotypeScore=132.2488;InbreedingCoeff=0.6326;MQ=62.25;MQ0=18;MQRankSum=-5.185;QD=10.71;ReadPosRankSum=-0.915;VQSLOD=2.3467;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:32:23.98:0,24,1008	0/0:7,0:7:3.01:0,3,180	./.	0/1:44,0:17:1.41:1,0,51	0/0:9,0:8:13.27:0,13,364	1/1:8,13:21:18.06:697,18,0	1/1:10,15:25:9.03:347,9,0	0/0:22,0:19:2.98:0,3,21	0/0:9,0:9:15.04:0,15,514	0/0:11,0:11:9.02:0,9,265	0/0:7,0:7:11.97:0,12,551	1/1:6,8:13:12.04:492,12,0	0/0:7,0:7:9.01:0,9,221	0/0:12,0:12:13.24:0,13,352	0/0:17,0:16:21.54:0,22,1080	0/0:8,0:7:12.01:0,12,246	0/1:11,13:24:2.03:3,0,2	0/0:9,0:9:15.03:0,15,557	0/0:12,0:11:6.01:0,6,164	0/0:15,0:15:24.07:0,24,1331	0/0:24,0:23:33.02:0,33,1139	0/0:9,0:8:9.03:0,9,562	1/1:5,6:11:9.03:222,9,0	1/1:8,14:22:3.01:124,3,0	0/0:14,0:14:18.06:0,18,1001	0/0:10,0:9:5.99:0,6,233	0/0:14,0:14:15.05:0,15,518	0/0:2,0:2:6.01:0,6,120
chr10	41496118	.	C	CT	1387.63	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=3.477;DP=543;FS=1.794;HRun=9;HaplotypeScore=92.7086;InbreedingCoeff=0.9219;MQ=74.05;MQ0=2;MQRankSum=-3.065;QD=18.75;ReadPosRankSum=-0.304;VQSLOD=3.4864;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:14,12:26:25.37:450,25,0	0/0:7,0:7:17.99:0,18,156	0/0:34,0:21:5.57:0,6,241	0/0:26,0:14:9.43:0,9,120	1/1:11,18:28:53.81:564,54,0	0/0:24,0:24:50.97:0,51,443	0/0:17,0:17:41.98:0,42,363	0/0:20,0:20:44.97:0,45,387	0/0:19,0:19:29.95:0,30,260	0/0:24,0:24:53.98:0,54,467	0/0:23,0:23:53.97:0,54,469	0/0:14,0:14:32.98:0,33,286	0/0:17,0:17:35.97:0,36,308	1/1:2,10:12:33.04:349,33,0	0/0:17,0:17:44.97:0,45,387	1/1:3,4:7:17.97:182,18,0	0/0:27,0:27:52.96:0,53,457	0/0:15,0:14:35.99:0,36,312	0/0:19,0:19:38.97:0,39,338	0/0:23,0:22:29.43:0,29,373	0/0:9,0:9:5.98:0,6,52	0/0:21,0:21:40.77:0,41,340	0/0:16,0:16:29.60:0,30,260	0/0:23,0:23:47.96:0,48,417	0/0:21,0:21:23.95:0,24,203	0/0:18,0:18:47.98:0,48,417	0/0:21,0:20:53.76:0,54,468	0/0:14,0:14:38.99:0,39,339
chr10	41496132	.	CTTT	C	5020.29	PASS	AB=0.798;AC=32;AF=0.571;AN=56;BaseQRankSum=-1.634;DP=540;FS=1.406;HRun=13;HaplotypeScore=90.7108;InbreedingCoeff=0.8651;MQ=70.58;MQ0=8;MQRankSum=-0.817;QD=15.17;ReadPosRankSum=3.367;VQSLOD=3.6212;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,13:21:26.58:301,27,0	0/0:6,0:6:18.03:0,18,279	0/1:50,0:25:10.47:10,0,186	0/0:42,0:13:18.51:0,19,176	1/1:14,12:24:51:578,51,0	0/0:9,0:21:32.84:0,33,245	0/0:5,0:14:29.93:0,30,281	1/1:6,10:17:32.86:344,33,0	0/0:6,0:14:23.94:0,24,198	1/1:9,11:20:26.77:284,27,0	1/1:5,17:22:35.87:417,36,0	0/0:8,0:13:26.90:0,27,241	0/0:5,0:14:26.88:0,27,204	1/1:8,5:13:14.95:168,15,0	1/1:4,13:17:28.09:361,28,0	1/1:1,6:7:10.38:175,10,0	0/0:23,0:24:57.98:0,58,862	1/1:4,13:16:30.08:365,30,0	1/1:7,10:18:29.95:327,30,0	1/1:8,19:26:38.69:432,39,0	1/1:1,3:4:6.01:73,6,0	0/0:9,0:20:53.88:0,54,499	0/0:7,0:18:36.23:0,36,353	0/0:13,0:23:53.37:0,53,466	1/1:1,14:15:18.05:219,18,0	1/1:7,10:17:29.96:350,30,0	0/1:9,14:23:0.82:325,0,1	1/1:5,9:14:23.96:292,24,0
chr10	41496225	.	C	CT	2016.45	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=-1.881;DP=417;FS=10.334;HRun=1;HaplotypeScore=61.2021;InbreedingCoeff=0.7907;MQ=63.63;MQ0=2;MQRankSum=-2.708;QD=29.65;ReadPosRankSum=-0.848;VQSLOD=1.9825;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:24:63.20:0,63,816	0/0:5,0:5:15.05:0,15,195	0/1:10,0:5:15.83:16,0,100	0/0:11,0:6:17.53:0,18,149	0/0:23,0:23:54.16:0,54,687	0/0:12,0:12:36.12:0,36,464	0/0:15,0:15:33.11:0,33,426	0/0:15,0:12:36.02:0,36,413	0/0:12,0:12:30.10:0,30,389	0/0:20,0:19:51.14:0,51,633	0/0:15,0:15:39.13:0,39,501	1/1:2,18:20:51.12:726,51,0	0/0:13,0:13:36.12:0,36,466	0/0:7,0:7:18.06:0,18,232	0/0:9,0:9:21.07:0,21,272	0/0:5,0:5:9.03:0,9,117	0/0:21,0:21:60.19:0,60,777	0/0:15,0:15:24.08:0,24,311	0/0:25,0:25:68.99:0,69,882	0/0:20,0:20:36.12:0,36,463	0/0:5,0:4:9.03:0,9,117	0/0:18,0:18:51.16:0,51,649	1/1:3,20:23:63.21:913,63,0	1/1:1,14:14:36.04:509,36,0	0/0:20,0:20:33.11:0,33,428	0/0:15,0:15:45.09:0,45,588	0/0:19,0:19:35.45:0,35,466	0/0:4,0:4:12.04:0,12,156
chr10	41496244	.	C	CTT	3631.60	PASS	AB=0.788;AC=46;AF=0.821;AN=56;BaseQRankSum=1.957;DP=488;FS=0.000;HRun=14;HaplotypeScore=109.2599;InbreedingCoeff=0.1798;MQ=54.82;MQ0=13;MQRankSum=-1.316;QD=7.66;ReadPosRankSum=-0.903;VQSLOD=1.2136;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:17,7:27:29.45:372,29,0	0/0:7,0:7:11.83:0,12,98	0/1:8,0:4:0:0,0,0	0/0:7,0:4:1.48:0,1,4	1/1:9,9:19:16.73:178,17,0	1/1:10,6:16:38.42:385,38,0	1/1:9,13:22:27.08:335,27,0	1/1:10,1:19:23.60:200,24,0	1/1:12,0:13:10.80:58,11,0	0/1:13,0:19:4.73:44,0,5	1/1:9,0:16:5.78:49,6,0	1/1:11,2:15:17.32:145,17,0	0/1:9,0:10:10.06:39,0,10	1/1:6,8:15:10.80:103,11,0	1/1:10,0:13:15.40:72,15,0	1/1:4,1:10:10.81:93,11,0	0/1:21,8:30:19.07:274,0,19	0/1:11,0:18:35.43:48,0,35	1/1:14,0:18:16.06:136,16,0	1/1:9,0:16:7.25:60,7,0	1/1:4,0:3:5:26,5,0	0/1:11,0:20:18.66:85,0,19	1/1:13,6:23:29.10:289,29,0	1/1:12,2:13:19.93:180,20,0	1/1:11,0:30:3.68:85,4,0	1/1:5,0:25:35.90:285,36,0	1/1:10,0:26:6.84:29,7,0	1/1:4,1:4:5.99:60,6,0
chr10	41497313	.	TATTC	T	9787.57	PASS	AB=0.955;AC=46;AF=0.821;AN=56;BaseQRankSum=-3.828;DP=606;FS=6.230;HRun=0;HaplotypeScore=124.7632;InbreedingCoeff=0.7643;MQ=65.19;MQ0=2;MQRankSum=4.226;QD=19.00;ReadPosRankSum=1.949;VQSLOD=4.2881;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,0:25:29.88:257,30,0	0/1:9,1:10:27.06:27,0,369	0/1:16,0:11:0.82:1,0,66	0/0:16,0:13:14.10:0,14,131	1/1:1,0:17:23.92:205,24,0	1/1:14,0:28:47.97:429,48,0	1/1:5,0:15:8.93:73,9,0	1/1:18,17:35:51.08:664,51,0	0/0:22,0:26:14.61:0,15,284	1/1:8,19:27:57.17:865,57,0	1/1:12,11:23:30.03:451,30,0	1/1:6,13:19:21.07:337,21,0	0/0:9,0:22:29.40:0,29,369	1/1:11,0:21:27.03:251,27,0	1/1:10,14:24:30.10:482,30,0	1/1:4,0:15:30.02:275,30,0	1/1:5,0:10:4.20:131,4,0	1/1:7,17:25:42.14:654,42,0	1/1:4,8:12:21.03:285,21,0	1/1:7,14:21:39.13:626,39,0	1/1:7,17:24:25.52:431,26,0	0/0:11,0:27:23.28:0,23,303	1/1:10,17:27:32.98:529,33,0	1/1:7,16:23:42.14:674,42,0	1/1:6,19:25:30.10:482,30,0	1/1:10,17:27:48.15:745,48,0	1/1:12,18:30:41.98:674,42,0	1/1:4,12:16:18.02:239,18,0
chr10	41497381	.	TTG	T	1145.89	PASS	AB=0.679;AC=5;AF=0.089;AN=56;BaseQRankSum=5.220;DP=645;FS=25.058;HRun=0;HaplotypeScore=125.7021;InbreedingCoeff=0.6859;MQ=61.17;MQ0=2;MQRankSum=1.766;QD=18.79;ReadPosRankSum=0.511;VQSLOD=1.9348;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:42.13:0,42,640	0/0:13,0:13:24.08:0,24,370	0/0:29,0:22:35.59:0,36,406	0/0:16,1:9:18.06:0,18,265	0/0:35,0:35:77.51:0,78,1140	1/1:7,18:26:50.98:572,51,0	0/1:10,9:19:6.99:351,0,7	0/0:32,1:33:13.87:0,14,657	0/0:12,0:27:32.99:0,33,288	0/0:21,0:21:39.12:0,39,577	0/0:20,0:20:45.10:0,45,635	0/0:27,0:27:31.61:0,32,731	0/0:11,0:17:23.98:0,24,205	0/0:20,1:21:0.95:0,1,478	0/0:27,0:28:57.17:0,57,844	0/0:17,0:17:36.12:0,36,566	1/1:5,11:16:30.09:352,30,0	0/0:23,1:24:3.97:0,4,531	0/0:15,0:15:30.08:0,30,428	0/0:24,0:24:51.14:0,51,752	0/0:22,0:22:35.83:0,36,513	0/0:8,0:13:14.94:0,15,123	0/0:25,0:25:48.16:0,48,737	0/0:29,0:29:57.15:0,57,862	0/0:26,1:27:15.99:0,16,715	0/0:29,0:29:66.22:0,66,1007	0/0:30,0:29:66.22:0,66,1038	0/0:17,0:17:48.14:0,48,728
chr10	41498723	.	T	TC	12608.73	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-18.156;DP=715;FS=6.170;HRun=2;HaplotypeScore=67.2803;InbreedingCoeff=0.9993;MQ=91.05;MQ0=0;MQRankSum=-3.404;QD=40.41;ReadPosRankSum=0.980;VQSLOD=5.0712;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,126,1633	0/0:10,0:10:30.10:0,30,389	0/0:28,0:28:84.07:0,84,1035	0/0:28,0:28:66.15:0,66,803	0/0:22,0:22:66.20:0,66,843	0/0:28,0:28:84.26:0,84,1075	0/0:25,0:25:69.22:0,69,896	1/1:4,39:43:99:1753,117,0	0/0:20,0:20:60.18:0,60,765	1/1:1,24:25:75.24:1104,75,0	1/1:1,24:25:69.23:1032,69,0	0/0:27,0:27:78.25:0,78,1013	0/0:20,0:20:60.19:0,60,777	0/0:21,0:21:63.16:0,63,786	1/1:1,26:27:72.24:1079,72,0	0/0:22,0:22:66.21:0,66,854	0/0:27,0:27:78.25:0,78,1008	1/1:0,25:25:69.19:1004,69,0	1/1:3,22:25:30.49:942,30,0	1/1:2,30:32:84.20:1208,84,0	1/1:2,22:24:54.18:809,54,0	0/0:33,0:33:90.29:0,90,1168	0/0:25,0:25:75.24:0,75,974	0/0:24,0:23:69.22:0,69,896	1/1:0,24:24:69.23:1034,69,0	1/1:0,25:25:75.25:1124,75,0	1/1:0,29:28:80.96:1204,81,0	1/1:0,7:7:21.07:315,21,0
chr10	41499538	.	TG	T	8263.86	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=5.418;DP=707;FS=13.108;HRun=4;HaplotypeScore=82.8314;InbreedingCoeff=0.9997;MQ=83.35;MQ0=0;MQRankSum=-0.754;QD=32.16;ReadPosRankSum=-0.454;VQSLOD=3.8897;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,153,2069	0/0:10,0:10:26.76:0,27,378	0/0:24,0:24:69.20:0,69,930	0/0:26,0:26:69.23:0,69,950	0/0:27,0:27:63.19:0,63,847	0/0:26,0:26:72.23:0,72,992	0/0:37,0:37:99:0,111,1496	1/1:2,28:30:84.26:1007,84,0	0/0:27,0:27:81.26:0,81,1115	1/1:2,26:28:81.25:971,81,0	1/1:2,13:15:33.10:396,33,0	0/0:10,0:10:30.07:0,30,372	0/0:29,0:29:87.28:0,87,1201	0/0:36,0:36:99:0,105,1470	1/1:2,23:25:63.19:756,63,0	0/0:34,0:34:99:0,99,1386	0/0:34,0:34:99:0,99,1367	1/1:1,21:22:63.15:756,63,0	1/1:0,14:14:42.10:477,42,0	1/1:0,14:14:39.08:452,39,0	1/1:1,31:32:81.25:972,81,0	0/0:31,0:31:87.28:0,87,1192	0/0:22,0:22:63.17:0,63,823	0/0:23,0:23:66.22:0,66,924	1/1:0,17:17:48.15:576,48,0	1/1:1,18:19:54.16:646,54,0	1/1:1,25:26:62.71:751,63,0	1/1:1,14:15:42.13:504,42,0
chr10	41499542	.	GT	G	2005.36	PASS	AB=1.000;AC=22;AF=0.393;AN=56;BaseQRankSum=16.384;DP=717;FS=15.521;HRun=1;HaplotypeScore=101.4859;InbreedingCoeff=0.8657;MQ=81.40;MQ0=0;MQRankSum=-2.816;QD=7.51;ReadPosRankSum=1.228;VQSLOD=-0.3825;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,156,2264	0/0:10,0:10:26.76:0,27,412	0/0:24,0:24:72.21:0,72,1046	0/0:25,0:25:68.36:0,68,1052	0/0:23,0:23:63.20:0,63,939	0/0:25,0:25:75.20:0,75,1109	0/0:39,0:39:99:0,114,1693	1/1:31,0:31:19.39:197,19,0	0/0:28,0:28:84.20:0,84,1195	1/1:27,2:29:40.84:249,41,0	1/1:14,1:15:8.87:103,9,0	0/0:11,0:11:30.09:0,30,431	0/0:29,0:29:84.28:0,84,1283	0/0:37,0:37:99:0,111,1653	1/1:25,0:25:13.88:192,14,0	0/0:37,0:37:99:0,111,1590	0/0:35,0:35:99:0,105,1474	1/1:22,0:22:59.48:258,59,0	0/1:18,0:18:40.80:81,0,41	1/1:15,0:15:10.89:115,11,0	1/1:32,0:32:52.80:304,53,0	0/0:28,0:28:84.29:0,84,1280	0/0:22,0:22:54.15:0,54,782	0/0:24,0:24:72.19:0,72,1052	0/1:19,0:19:0.77:132,0,1	1/1:19,1:20:23.27:179,23,0	1/1:26,1:27:22.10:239,22,0	1/1:14,0:14:38.41:172,38,0
chr10	41499824	.	CGTGTGTGTGTGTGTGTGTGTGT	C	2524	PASS	AC=6;AF=0.111;AN=54;BaseQRankSum=6.461;DP=548;FS=3.575;HRun=0;HaplotypeScore=277.3973;InbreedingCoeff=0.8816;MQ=63.33;MQ0=9;MQRankSum=-5.871;QD=50.48;ReadPosRankSum=-0.163;VQSLOD=2.3804;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:35:44.74:0,45,3789	0/0:9,0:9:21.05:0,21,1674	0/0:32,0:26:6.01:0,6,73	./.	0/0:22,0:22:24.07:0,24,1285	0/0:13,0:14:10.28:0,10,554	0/0:14,0:19:30.99:0,31,1961	0/0:21,0:19:21.06:0,21,770	1/1:8,6:15:21.07:1153,21,0	0/0:18,0:18:39.13:0,39,2937	0/0:14,0:14:9.03:0,9,750	0/0:14,0:15:21.96:0,22,1056	1/1:12,5:17:17.09:872,17,0	0/0:15,0:16:21.07:0,21,1957	0/0:23,0:23:19.33:0,19,1526	0/0:16,0:16:28.34:0,28,1874	0/0:17,0:22:24.08:0,24,1611	0/0:30,0:32:60.21:0,60,4978	0/0:15,0:16:26.76:0,27,1566	0/0:21,0:22:36.11:0,36,2635	0/0:24,0:24:24.07:0,24,915	1/1:11,6:18:12.51:634,13,0	0/0:17,0:17:30.10:0,30,2249	0/0:23,0:24:30.10:0,30,1541	0/0:22,0:22:39.13:0,39,3380	0/0:11,0:11:18.06:0,18,948	0/0:23,0:22:18.06:0,18,1383	0/0:8,0:7:9.03:0,9,495
chr10	41501139	.	GACACAGAC	G	1761.69	PASS	AB=1.000;AC=16;AF=0.286;AN=56;BaseQRankSum=-1.326;DP=587;FS=1.980;HRun=0;HaplotypeScore=153.3526;InbreedingCoeff=0.6203;MQ=67.79;MQ0=33;MQRankSum=-1.081;QD=12.23;ReadPosRankSum=-1.400;VQSLOD=2.4348;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:40.40:0,40,1365	0/0:3,0:3:9.03:0,9,267	0/0:70,0:43:64.84:0,65,643	0/0:72,0:37:63.23:0,63,698	0/0:19,0:18:35.65:0,36,800	0/0:18,0:18:1.55:0,2,396	0/0:24,0:24:20.34:0,20,444	1/1:16,1:12:11.81:293,12,0	0/0:18,0:18:29.95:0,30,283	0/1:15,0:10:47.12:47,0,75	0/0:10,0:7:5.75:0,6,31	0/0:15,0:15:6.01:0,6,92	0/0:14,0:14:8.83:0,9,117	0/0:11,0:10:15.45:0,15,476	0/0:12,0:12:5.72:0,6,31	0/0:19,0:19:10.17:0,10,1271	0/0:23,0:23:53.63:0,54,800	0/0:21,0:21:5.06:0,5,89	1/1:13,2:11:17.69:271,18,0	1/1:5,12:16:13.01:201,13,0	1/1:5,27:30:6.02:113,6,0	0/0:20,0:18:36.06:0,36,451	0/0:14,0:16:27.05:0,27,591	0/0:26,0:27:25.96:0,26,233	0/1:14,0:12:55.32:55,0,183	1/1:4,16:20:45:712,45,0	1/1:0,6:6:6.02:165,6,0	1/1:1,4:5:3.48:84,3,0
chr10	41501141	.	CACAG	C	2314.22	PASS	AB=1.000;AC=27;AF=0.482;AN=56;BaseQRankSum=0.732;DP=587;FS=7.722;HRun=0;HaplotypeScore=124.3578;InbreedingCoeff=0.4201;MQ=65.42;MQ0=33;MQRankSum=0.161;QD=8.04;ReadPosRankSum=0.206;VQSLOD=2.3021;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:26.07:0,26,868	0/0:3,0:3:9.01:0,9,148	0/0:69,0:42:67.30:0,67,658	0/0:70,0:35:56.39:0,56,614	0/0:19,0:18:35.63:0,36,445	0/0:18,0:18:5.64:0,6,147	0/1:24,0:24:19.45:19,0,182	1/1:19,0:14:32.26:257,32,0	0/1:18,0:18:53.09:116,0,53	1/1:8,7:10:20.91:270,21,0	1/1:4,5:6:6.02:114,6,0	0/0:15,0:15:6.01:0,6,66	0/1:14,0:14:11.53:69,0,12	0/0:11,0:10:15.45:0,15,244	1/1:2,10:12:5.97:114,6,0	0/0:19,0:19:40.66:0,41,887	0/1:22,0:22:27.35:27,0,388	1/1:5,16:21:24.49:417,24,0	1/1:19,0:13:26.88:245,27,0	0/1:18,0:16:9.37:68,0,9	0/1:32,0:30:4.76:27,0,5	0/1:19,0:17:99:113,0,107	0/0:19,0:16:25.27:0,25,328	0/0:27,0:27:26.22:0,26,182	1/1:12,3:13:18.79:271,19,0	1/1:20,0:19:13.73:281,14,0	1/1:6,0:6:6.02:68,6,0	1/1:5,0:5:3.48:36,3,0
chr10	41501145	.	GAC	G	1430.51	PASS	AB=0.914;AC=35;AF=0.625;AN=56;BaseQRankSum=2.804;DP=578;FS=0.990;HRun=0;HaplotypeScore=113.9438;InbreedingCoeff=0.3644;MQ=61.80;MQ0=35;MQRankSum=-1.013;QD=4.32;ReadPosRankSum=0.171;VQSLOD=2.6601;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:25,1:26:22.82:23,0,420	0/1:2,1:3:28.15:28,0,40	0/0:63,0:35:0:0,0,0	0/0:66,0:31:0:0,0,0	0/0:9,0:20:18:0,18,157	1/1:6,12:18:18.03:198,18,0	1/1:7,14:23:20.63:197,21,0	1/1:22,0:17:4.98:136,5,0	1/1:8,0:17:8.85:73,9,0	0/1:17,0:12:27.37:27,0,35	1/1:9,0:6:5.36:22,5,0	0/0:4,0:14:3.01:0,3,43	1/1:7,0:14:11.42:68,11,0	0/0:6,0:12:11.88:0,12,124	1/1:13,0:13:5.36:22,5,0	0/1:15,3:18:27:27,0,446	0/0:23,0:23:12.67:0,13,110	1/1:19,0:19:11.92:69,12,0	1/1:17,0:12:19.08:115,19,0	1/1:16,2:16:9.48:93,9,0	1/1:33,0:30:5.96:53,6,0	1/1:16,0:17:16.51:77,17,0	0/0:19,0:15:15.89:0,16,141	0/0:14,0:28:4.76:0,5,35	0/1:12,0:12:14.48:88,0,14	1/1:18,0:17:29.48:233,29,0	1/1:7,0:6:5.90:37,6,0	1/1:4,0:4:2.94:18,3,0
chr10	41501228	.	G	GTA	784.10	PASS	AB=0.989;AC=34;AF=0.630;AN=54;BaseQRankSum=4.810;DP=284;FS=9.904;HRun=0;HaplotypeScore=120.2335;InbreedingCoeff=-0.3880;MQ=38.23;MQ0=3;MQRankSum=-3.566;QD=2.86;ReadPosRankSum=6.474;VQSLOD=1.2010;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:14,0:13:25.57:26,0,31	./.	0/1:6,0:5:9.47:9,0,28	0/0:9,0:3:9:0,9,78	1/1:11,0:11:0.90:17,1,0	0/1:9,0:9:26.72:47,0,27	0/1:12,0:12:26.14:26,0,28	0/1:10,0:9:17.21:17,0,57	0/1:12,0:12:2.41:56,0,2	0/1:10,0:10:17.11:77,0,17	1/1:8,1:8:2.82:16,3,0	1/1:10,0:10:5.01:44,5,0	0/1:12,0:12:4.09:4,0,13	1/1:12,0:12:8.34:39,8,0	0/1:12,1:12:6.06:9,0,6	0/1:13,0:13:27.69:50,0,28	0/1:10,0:10:11.75:28,0,12	1/1:7,0:7:7.57:61,8,0	0/1:11,0:11:32.28:32,0,48	1/1:8,0:8:5.92:39,6,0	0/1:14,0:14:22.88:23,0,27	0/1:9,0:8:13.40:26,0,13	0/1:9,0:8:10.39:42,0,10	1/1:7,0:7:2.68:11,3,0	0/1:12,1:13:50.28:50,0,50	1/1:18,2:20:29.52:158,30,0	0/1:11,0:10:20.41:20,0,39	0/1:1,0:1:0:0,0,0
chr10	41503242	.	GT	G	3683.43	PASS	AB=0.926;AC=11;AF=0.196;AN=56;BaseQRankSum=11.957;DP=686;FS=3.548;HRun=2;HaplotypeScore=65.3547;InbreedingCoeff=0.9246;MQ=86.11;MQ0=0;MQRankSum=-0.675;QD=26.69;ReadPosRankSum=1.884;VQSLOD=3.5080;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:57:99:0,172,2531	0/0:13,0:13:39.13:0,39,583	0/0:27,0:27:68.95:0,69,940	0/0:20,0:20:51.14:0,51,705	0/0:20,0:20:60.16:0,60,839	0/0:19,0:18:54.18:0,54,796	0/0:16,0:16:48.16:0,48,716	0/0:25,0:24:69.22:0,69,1000	0/0:23,0:23:66.21:0,66,964	1/1:3,22:25:66.16:822,66,0	1/1:1,23:24:63.15:794,63,0	0/0:25,0:25:75.24:0,75,1104	0/0:22,0:22:66.22:0,66,986	0/0:27,0:27:81.27:0,81,1211	1/1:0,20:20:51.17:662,51,0	0/0:22,0:22:60.19:0,60,879	0/0:29,0:29:81.27:0,81,1214	1/1:0,20:20:48.16:623,48,0	0/0:24,0:24:72.23:0,72,1057	0/0:32,0:32:96.33:0,96,1438	0/0:17,0:17:51.16:0,51,745	0/0:30,0:30:90.30:0,90,1346	0/0:37,0:37:99:0,111,1661	0/0:28,0:28:84.28:0,84,1257	1/1:0,24:24:60.20:779,60,0	0/1:23,2:25:2.68:3,0,958	0/0:24,0:24:69.23:0,69,1033	0/0:11,0:11:33.11:0,33,495
chr10	41505958	.	TACACACACACACACACACACACAC	T	4477.64	PASS	AB=0.747;AC=20;AF=0.357;AN=56;BaseQRankSum=4.808;DP=515;FS=11.713;HRun=0;HaplotypeScore=255.9641;InbreedingCoeff=0.5499;MQ=61.74;MQ0=23;MQRankSum=-3.819;QD=22.06;ReadPosRankSum=-0.538;VQSLOD=2.0626;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:25:39.13:0,39,2335	0/0:7,0:7:11.07:0,11,492	0/0:42,0:17:5.97:0,6,47	0/0:42,0:20:11.98:0,12,166	0/0:10,0:12:33.11:0,33,2357	0/0:11,0:15:15.05:0,15,1151	0/0:15,0:15:33.02:0,33,1202	1/1:30,0:28:7.81:213,8,0	0/0:11,0:11:24.49:0,24,1108	0/1:3,0:11:33.07:172,0,33	1/1:5,0:5:2.68:11,3,0	0/0:19,0:19:25:0,25,1340	0/0:11,0:17:27.53:0,28,1266	0/0:12,0:13:18.06:0,18,1553	1/1:4,0:15:11.62:498,12,0	0/0:15,0:19:27.08:0,27,1405	0/0:18,0:18:36.12:0,36,2291	0/1:11,0:11:90.66:175,0,91	0/1:11,5:16:6.11:267,0,6	1/1:5,6:11:12.04:508,12,0	1/1:23,0:22:1.41:305,1,0	0/0:7,0:11:15.71:0,16,967	0/0:17,0:17:30.08:0,30,1838	0/0:23,0:23:30.34:0,30,1966	1/1:7,0:15:15.05:637,15,0	1/1:7,4:11:2.08:496,2,0	1/1:22,11:33:20.86:1017,21,0	0/1:10,12:22:99:179,0,155
chr10	41506687	.	TGA	T	5455.16	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=12.956;DP=713;FS=18.151;HRun=0;HaplotypeScore=84.2803;InbreedingCoeff=0.9989;MQ=70.31;MQ0=2;MQRankSum=-1.787;QD=42.95;ReadPosRankSum=1.752;VQSLOD=4.8226;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:93.30:0,93,1724	0/0:9,0:9:27.09:0,27,521	0/0:10,0:10:27.09:0,27,490	0/0:13,0:12:29.53:0,30,441	0/0:35,0:35:99:0,105,2011	1/1:0,20:20:54.18:827,54,0	1/1:1,24:25:66.22:1011,66,0	0/0:44,0:44:99:0,132,2511	0/0:21,0:21:60.21:0,60,1138	0/0:43,0:43:99:0,129,2459	0/0:25,0:25:72.25:0,72,1372	1/1:0,23:23:69.23:1055,69,0	0/0:24,0:24:66.23:0,66,1262	0/0:24,0:24:72.25:0,72,1390	0/0:28,0:28:81.27:0,81,1529	0/0:21,0:21:63.22:0,63,1217	0/0:34,0:34:96.31:0,96,1805	0/0:18,0:17:51.17:0,51,983	0/0:18,0:18:54.19:0,54,1043	0/0:29,0:29:87.30:0,87,1668	0/0:35,0:35:99:0,105,2011	0/0:26,0:26:72.23:0,72,1348	1/1:0,28:28:81.09:1231,81,0	1/1:0,31:31:87.30:1332,87,0	0/0:30,0:30:90.31:0,90,1714	0/0:29,0:29:87.30:0,87,1681	0/0:28,0:28:81.28:0,81,1553	0/0:9,0:9:24.08:0,24,463
chr10	41508093	.	CTT	C	6138.90	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-1.760;DP=626;FS=1.907;HRun=12;HaplotypeScore=92.1840;InbreedingCoeff=0.9560;MQ=71.74;MQ0=0;MQRankSum=-0.875;QD=22.49;ReadPosRankSum=1.994;VQSLOD=4.7857;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:6,1:38:33.26:0,33,182	0/0:16,0:16:48.13:0,48,656	0/0:9,0:7:0.19:0,0,1	0/0:11,0:12:11.76:0,12,74	0/0:7,1:24:39.46:0,39,165	0/0:31,0:32:71.15:0,71,894	0/0:23,0:23:63.09:0,63,796	1/1:5,23:31:71.32:676,71,0	0/0:2,0:23:39.93:0,40,140	1/1:4,24:28:69.09:694,69,0	1/1:2,20:23:47.76:469,48,0	0/0:10,0:10:27.07:0,27,364	0/0:3,0:15:22.84:0,23,96	0/0:3,0:18:45.60:0,46,179	1/1:1,23:24:60.12:610,60,0	0/0:2,1:20:7.15:0,7,91	0/0:27,0:28:71.67:0,72,963	1/1:2,23:26:68.89:683,69,0	1/1:4,24:31:70.03:668,70,0	1/1:4,17:22:38.74:378,39,0	1/1:3,10:13:27.03:275,27,0	0/0:7,1:33:63.38:0,63,250	0/0:23,1:26:29.02:0,29,727	0/0:22,0:24:68.18:0,68,917	1/1:2,15:19:50.58:481,51,0	1/1:5,16:22:50.79:491,51,0	1/1:6,19:26:56.82:560,57,0	1/1:3,5:8:15.03:153,15,0
chr10	41510399	.	C	CTTTT	10006.42	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=0.235;DP=730;FS=4.089;HRun=9;HaplotypeScore=129.6371;InbreedingCoeff=0.9831;MQ=63.60;MQ0=0;MQRankSum=-2.700;QD=30.69;ReadPosRankSum=-4.836;VQSLOD=1.8885;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:51:0,51,675	0/0:11,0:11:27.01:0,27,338	0/0:13,0:13:6.14:0,6,173	0/0:11,0:10:16.62:0,17,216	0/0:41,0:40:99:0,114,1646	0/0:25,0:25:60.15:0,60,876	0/0:16,0:16:20.42:0,20,545	1/1:5,1:32:78.13:913,78,0	0/0:31,0:31:78.19:0,78,1135	1/1:3,21:25:58.09:1092,58,0	1/1:2,20:25:49.94:919,50,0	0/0:27,0:27:75.18:0,75,1030	0/0:41,0:41:99:0,108,1529	0/0:27,0:27:66.17:0,66,959	1/1:0,27:27:50.95:1211,51,0	0/0:25,0:25:63.14:0,63,896	0/0:29,0:30:61.86:0,62,1028	1/1:2,27:32:57.15:1202,57,0	1/1:7,0:19:38.94:435,39,0	1/1:8,2:35:89.88:1069,90,0	1/1:3,0:17:27.01:307,27,0	0/0:31,0:31:53.59:0,54,1064	0/0:25,0:25:66.15:0,66,944	0/0:24,0:24:66.21:0,66,958	1/1:3,18:23:27.09:648,27,0	1/1:8,0:41:99:1184,101,0	1/1:2,0:31:54.03:654,54,0	1/1:1,0:19:30.09:373,30,0
chr10	41510960	.	AAGAGAGAGAG	A	1026.61	PASS	AB=1.000;AC=14;AF=0.250;AN=56;BaseQRankSum=0.336;DP=640;FS=0.000;HRun=0;HaplotypeScore=215.3143;InbreedingCoeff=0.6273;MQ=59.03;MQ0=34;MQRankSum=-2.542;QD=6.15;ReadPosRankSum=0.975;VQSLOD=2.1497;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:16:17.94:0,18,141	0/0:4,0:4:12.04:0,12,305	0/0:40,0:18:3.48:0,3,66	0/0:58,0:16:5.88:0,6,53	0/0:19,0:17:20:0,20,167	1/1:5,14:19:1.90:68,2,0	1/1:13,19:28:6.02:182,6,0	0/0:31,0:30:36.87:0,37,493	0/0:21,0:18:28.98:0,29,366	0/0:19,0:22:51.17:0,51,976	0/0:12,0:16:20.83:0,21,550	1/1:12,2:13:7.06:427,7,0	0/0:24,0:25:49.35:0,49,551	0/1:16,0:15:36.09:36,0,141	0/0:21,0:27:51.14:0,51,992	0/1:15,0:14:75.97:125,0,76	1/1:15,0:14:11.90:235,12,0	0/0:25,0:25:27.06:0,27,652	0/0:21,0:19:34.27:0,34,574	0/0:26,0:26:27.55:0,28,659	0/0:18,0:19:21.07:0,21,463	0/0:17,0:17:13.85:0,14,125	1/1:16,11:23:5.56:51,6,0	1/1:16,13:25:8.60:68,9,0	0/0:12,0:17:30.10:0,30,590	0/0:22,0:24:54.07:0,54,1053	0/0:25,0:28:54.84:0,55,1437	0/0:9,0:11:26.12:0,26,636
chr10	41510975	.	A	AG	1191.68	PASS	AB=0.751;AC=4;AF=0.071;AN=56;BaseQRankSum=3.462;DP=630;FS=0.627;HRun=1;HaplotypeScore=147.8321;InbreedingCoeff=-0.0808;MQ=48.37;MQ0=39;MQRankSum=-5.333;QD=15.28;ReadPosRankSum=-0.845;VQSLOD=3.2769;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:19,7:22:90.30:214,0,90	0/0:5,0:5:15.05:0,15,192	0/0:30,0:8:16.85:0,17,173	0/0:50,0:10:6.81:0,7,110	0/1:11,9:18:21.35:349,0,21	0/0:19,0:18:18.06:0,18,228	0/0:28,0:24:11.21:0,11,96	0/0:24,0:21:54.70:0,55,592	0/0:22,0:19:42.12:0,42,511	0/0:25,0:24:65.47:0,65,666	0/0:19,0:18:32.48:0,32,286	0/0:14,0:13:26.26:0,26,242	0/0:24,0:22:52.83:0,53,547	0/1:12,4:15:59.70:364,0,60	0/0:28,0:28:62.05:0,62,585	0/1:10,6:15:53.94:374,0,54	0/0:18,0:16:29.20:0,29,287	0/0:23,0:22:35.90:0,36,416	0/0:19,0:17:45.83:0,46,519	0/0:21,0:20:33.54:0,34,407	0/0:25,0:25:22.21:0,22,218	0/0:18,0:17:21.04:0,21,236	0/0:21,0:17:18.94:0,19,229	0/0:29,0:25:21.06:0,21,266	0/0:21,0:20:30.04:0,30,252	0/0:27,0:27:66.75:0,67,687	0/0:30,0:30:64.43:0,64,600	0/0:12,0:12:25.95:0,26,237
chr10	41510976	.	GA	G	1099.50	PASS	AB=0.827;AC=4;AF=0.071;AN=56;BaseQRankSum=5.019;DP=634;FS=3.827;HRun=1;HaplotypeScore=146.7640;InbreedingCoeff=-0.0868;MQ=47.31;MQ0=39;MQRankSum=-5.617;QD=13.74;ReadPosRankSum=0.319;VQSLOD=2.9915;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:25,1:22:91.52:212,0,92	0/0:5,0:5:15.05:0,15,219	0/0:30,0:8:16.84:0,17,174	0/0:50,1:9:9.35:0,9,136	0/1:16,5:19:21.64:326,0,22	0/0:19,0:18:18.06:0,18,237	0/0:28,0:24:2.01:0,2,69	0/0:24,0:21:60.19:0,60,789	0/0:22,0:19:42.12:0,42,531	0/0:25,0:24:60.28:0,60,589	0/0:18,0:17:25.86:0,26,219	0/0:14,0:13:16.20:0,16,237	0/0:24,0:22:58.06:0,58,698	0/1:10,6:15:55.42:337,0,55	0/0:28,0:28:56.65:0,57,498	0/1:13,4:16:53.28:334,0,53	0/0:18,0:17:27.31:0,27,324	0/0:23,0:22:33.73:0,34,445	0/0:18,0:16:48.13:0,48,630	0/0:22,0:21:33.16:0,33,436	0/0:26,0:26:31.89:0,32,357	0/0:18,0:17:21.05:0,21,262	0/0:21,0:17:18.94:0,19,238	0/0:29,0:25:21.06:0,21,266	0/0:21,0:20:24.46:0,24,167	0/0:27,0:27:77.03:0,77,933	0/0:30,0:30:78.01:0,78,967	0/0:12,0:12:33.09:0,33,394
chr10	41510992	.	G	GA	774.15	PASS	AB=0.943;AC=11;AF=0.196;AN=56;BaseQRankSum=4.537;DP=637;FS=0.600;HRun=1;HaplotypeScore=151.8997;InbreedingCoeff=-0.2621;MQ=44.87;MQ0=32;MQRankSum=-3.077;QD=3.31;ReadPosRankSum=0.892;VQSLOD=0.0257;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,5:25:22.68:0,23,241	0/0:6,0:6:12.93:0,13,168	0/0:30,0:5:14.90:0,15,120	0/0:51,0:5:9.50:0,10,120	0/0:9,7:17:14.98:0,15,147	0/0:23,0:22:15.04:0,15,185	0/1:30,0:27:27.86:28,0,106	0/0:24,0:21:26.21:0,26,461	0/1:28,0:25:97.92:98,0,496	0/0:19,0:18:45.29:0,45,435	0/0:16,0:15:19.96:0,20,175	0/1:18,0:17:99:106,0,160	0/1:19,2:19:99:223,0,265	0/1:11,3:14:89.66:90,0,111	0/0:22,0:22:30.08:0,30,236	0/1:12,6:19:99:113,0,214	0/1:16,0:15:38.36:38,0,186	0/1:22,0:21:51.51:52,0,181	0/0:17,0:15:37.86:0,38,434	0/0:22,0:21:23.57:0,24,283	0/0:23,0:23:5.12:0,5,132	0/1:22,1:22:90.35:90,0,153	0/0:18,0:16:9.74:0,10,105	0/0:28,0:24:14.93:0,15,176	0/0:24,0:23:21.71:0,22,176	0/1:26,1:27:23.73:24,0,579	0/0:36,0:36:41.36:0,41,714	0/1:13,1:14:59.61:60,0,245
chr10	41511005	.	CAG	C	4345.14	PASS	AB=0.865;AC=25;AF=0.446;AN=56;BaseQRankSum=-6.683;DP=663;FS=9.994;HRun=0;HaplotypeScore=149.1240;InbreedingCoeff=0.7414;MQ=50.62;MQ0=24;MQRankSum=0.763;QD=11.90;ReadPosRankSum=0.293;VQSLOD=4.1113;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:27:14.99:0,15,129	0/0:8,0:8:17.42:0,17,233	0/0:34,0:9:7.61:0,8,61	0/1:65,0:10:2.50:2,0,90	0/0:8,0:17:3:0,3,26	0/1:21,0:21:2.68:3,0,150	0/0:19,0:18:9.03:0,9,103	1/1:19,6:23:46.85:523,47,0	0/0:29,0:26:35.59:0,36,534	1/1:3,17:19:48.11:559,48,0	1/1:5,9:13:6.02:75,6,0	0/0:5,0:21:19.07:0,19,180	0/0:16,0:14:25.63:0,26,359	0/0:6,0:16:8.94:0,9,77	1/1:5,17:22:11.36:148,11,0	0/0:10,0:24:12.29:0,12,171	0/0:8,0:17:11.13:0,11,112	0/1:7,15:21:2.19:61,0,2	1/1:2,19:20:53.54:585,54,0	1/1:5,19:24:5.90:75,6,0	1/1:10,15:25:7.86:88,8,0	0/0:22,0:22:24.06:0,24,352	0/0:12,0:13:9.01:0,9,92	0/0:23,0:24:19.62:0,20,164	1/1:7,17:23:15.05:186,15,0	1/1:25,5:30:69.46:792,69,0	1/1:29,8:37:68.41:838,68,0	1/1:8,7:15:30.10:411,30,0
chr10	41511021	.	C	CAG	852.43	PASS	AB=0.899;AC=10;AF=0.179;AN=56;BaseQRankSum=-0.372;DP=702;FS=0.643;HRun=0;HaplotypeScore=159.3075;InbreedingCoeff=0.0761;MQ=63.31;MQ0=20;MQRankSum=-1.006;QD=5.29;ReadPosRankSum=2.289;VQSLOD=3.2972;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:1.38:0,1,114	0/0:8,0:8:18.05:0,18,217	0/0:55,0:17:24.72:0,25,214	0/0:101,0:30:12.28:0,12,224	0/0:17,0:17:15.02:0,15,156	0/0:21,0:21:8.03:0,8,102	0/0:19,0:17:5.58:0,6,74	0/0:34,0:33:56.96:0,57,655	0/1:7,19:23:4.83:405,0,5	0/0:22,0:22:48.14:0,48,569	0/1:11,0:11:14.16:14,0,62	0/1:22,0:21:1.78:2,0,65	1/1:5,6:11:15.05:241,15,0	0/1:17,0:17:7.86:8,0,50	0/0:24,0:25:27.21:0,27,286	0/1:19,0:19:4.33:4,0,44	0/0:19,0:19:2.16:0,2,124	0/1:19,0:18:7.53:8,0,39	0/0:24,0:24:56.62:0,57,607	0/0:21,0:21:15.04:0,15,175	0/0:22,0:22:14.80:0,15,151	0/1:8,14:22:12.06:299,0,12	0/1:14,0:12:3.46:3,0,108	0/0:27,0:23:13.03:0,13,125	0/0:24,0:25:26.57:0,27,264	0/0:26,0:27:48.14:0,48,652	0/0:31,0:31:68.89:0,69,753	0/0:15,0:16:28.62:0,29,379
chr10	41511760	.	C	CT	6226.04	PASS	AB=0.588;AC=23;AF=0.411;AN=56;BaseQRankSum=-13.671;DP=581;FS=0.689;HRun=9;HaplotypeScore=55.5264;InbreedingCoeff=0.9218;MQ=81.72;MQ0=0;MQRankSum=-1.909;QD=24.04;ReadPosRankSum=-1.311;VQSLOD=5.1110;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:86.95:0,87,750	0/0:8,0:8:17.98:0,18,156	0/0:25,0:26:38.56:0,39,327	0/0:19,0:18:14.42:0,14,267	0/0:22,0:22:56.96:0,57,489	0/0:23,0:23:53.95:0,54,461	0/0:14,0:14:41.99:0,42,365	1/1:10,36:46:81.35:1092,81,0	0/0:19,0:19:50.98:0,51,443	1/1:6,16:22:48.10:514,48,0	1/1:1,16:17:45.08:484,45,0	0/0:15,0:15:38.98:0,39,336	0/0:20,1:24:29.93:0,30,449	0/0:7,0:7:14.97:0,15,130	1/1:3,16:20:15.73:403,16,0	0/0:26,0:26:71.93:0,72,612	0/0:33,0:33:89.98:0,90,781	0/1:6,13:20:10.16:337,0,10	1/1:3,17:20:51.14:564,51,0	1/1:3,18:21:50.35:538,50,0	1/1:0,17:17:39.10:430,39,0	0/0:15,0:15:38.96:0,39,334	0/0:17,0:17:41.97:0,42,365	0/0:22,0:22:62.94:0,63,540	1/1:6,18:25:51.14:563,51,0	1/1:4,13:17:16.06:405,16,0	1/1:0,26:26:63.17:697,63,0	1/1:1,7:8:18.05:199,18,0
chr10	41511946	.	TACAC	T	986.79	PASS	AB=0.868;AC=20;AF=0.385;AN=52;BaseQRankSum=2.280;DP=585;FS=0.000;HRun=0;HaplotypeScore=118.1782;InbreedingCoeff=0.7340;MQ=63.25;MQ0=15;MQRankSum=-3.355;QD=5.25;ReadPosRankSum=1.433;VQSLOD=1.6566;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:22.60:0,23,363	0/0:11,0:11:12.04:0,12,257	./.	./.	1/1:16,2:18:3.01:47,3,0	1/1:13,0:19:12.01:112,12,0	1/1:8,0:10:3:28,3,0	0/0:37,0:36:15.05:0,15,245	0/1:9,4:14:0.45:128,0,0	0/0:28,0:28:39.13:0,39,643	0/0:19,0:19:18.06:0,18,302	1/1:10,0:17:18.02:167,18,0	1/1:9,7:17:24.07:354,24,0	1/1:7,4:12:12.03:168,12,0	0/0:22,0:22:36.12:0,36,569	0/0:17,0:17:12.04:0,12,254	0/0:9,0:13:8.23:0,8,37	0/0:20,0:19:19.78:0,20,294	0/1:18,0:18:5.71:6,0,302	0/0:32,0:31:50.23:0,50,798	0/0:32,0:32:42.12:0,42,725	1/1:14,7:21:3.01:47,3,0	1/1:10,0:16:9.01:84,9,0	1/1:22,0:24:3.47:29,3,0	0/0:20,0:20:24.08:0,24,407	0/0:32,0:32:40.02:0,40,606	0/0:24,0:24:21.07:0,21,341	0/0:10,0:10:18.06:0,18,313
chr10	41511972	.	C	CAT	5657.36	PASS	AB=0.630;AC=18;AF=0.321;AN=56;BaseQRankSum=-11.433;DP=659;FS=5.834;HRun=0;HaplotypeScore=101.3802;InbreedingCoeff=0.5063;MQ=55.02;MQ0=24;MQRankSum=1.106;QD=17.90;ReadPosRankSum=3.954;VQSLOD=4.4994;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:29:59.79:0,60,511	0/0:11,0:11:29.97:0,30,284	0/0:24,0:9:17.19:0,17,135	0/0:31,0:5:14.98:0,15,131	0/0:18,0:18:38.21:0,38,304	0/0:22,0:21:44.64:0,45,327	0/0:14,0:14:23.91:0,24,190	1/1:31,0:30:25.43:492,25,0	0/0:15,0:15:34.94:0,35,281	1/1:6,25:32:22.17:832,22,0	0/1:5,17:22:26.08:153,0,26	0/0:23,0:23:47.53:0,48,344	0/0:31,0:31:76.16:0,76,589	0/0:18,0:18:47.62:0,48,357	1/1:2,23:25:28.16:678,28,0	0/0:17,0:17:41.98:0,42,407	0/0:19,0:19:41.76:0,42,325	0/1:8,18:25:44.94:212,0,45	0/1:14,2:15:74.74:237,0,75	1/1:4,22:25:13.90:767,14,0	1/1:43,2:44:27.82:826,28,0	0/0:20,0:20:29.79:0,30,226	0/0:21,0:21:50.71:0,51,387	0/0:28,0:26:38.59:0,39,297	0/1:6,17:24:20.71:260,0,21	0/1:5,25:31:0.47:722,0,0	1/1:3,22:25:1.04:323,1,0	0/1:5,8:13:16.41:155,0,16
chr10	41513055	.	G	GAAA	10368.08	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=3.427;DP=650;FS=1.464;HRun=10;HaplotypeScore=110.7559;InbreedingCoeff=0.9992;MQ=76.97;MQ0=0;MQRankSum=-4.960;QD=28.41;ReadPosRankSum=-1.858;VQSLOD=3.5565;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,1:35:73.37:570,73,0	0/0:13,0:13:39.11:0,39,466	0/0:29,0:24:46.80:0,47,517	0/0:27,0:25:36.70:0,37,368	1/1:5,0:20:43.07:335,43,0	0/0:18,0:20:43.36:0,43,526	0/0:21,0:22:46.47:0,46,581	1/1:11,9:21:39.13:649,39,0	0/0:23,0:23:60.15:0,60,718	1/1:5,0:16:39.10:522,39,0	1/1:4,0:18:36.08:493,36,0	0/0:30,0:30:75.18:0,75,912	0/0:32,0:33:80.66:0,81,964	1/1:4,0:19:44.85:360,45,0	1/1:9,2:29:60.17:847,60,0	1/1:4,0:23:44.31:334,44,0	0/0:23,0:25:72.15:0,72,855	1/1:7,0:18:27.09:374,27,0	1/1:4,12:17:39.10:656,39,0	1/1:8,21:32:74.20:1162,74,0	1/1:6,11:19:36.08:624,36,0	0/0:19,0:19:48.09:0,48,570	0/0:19,0:20:51.08:0,51,601	0/0:23,0:23:58.26:0,58,727	1/1:5,11:24:51.17:813,51,0	1/1:5,18:31:75.14:1182,75,0	1/1:7,21:31:63.17:1140,63,0	1/1:2,5:11:21.03:304,21,0
chr10	41513455	.	GTGTATAGGATGT	G	7243.48	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=12.075;DP=618;FS=1.644;HRun=0;HaplotypeScore=206.5425;InbreedingCoeff=0.9962;MQ=74.54;MQ0=0;MQRankSum=-13.089;QD=51.74;ReadPosRankSum=4.407;VQSLOD=4.7236;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:93.32:0,93,5475	0/0:6,0:6:18.06:0,18,1092	0/0:27,0:27:72.24:0,72,3509	0/0:25,0:25:69.24:0,69,3314	0/0:19,0:19:51.18:0,51,2858	1/1:4,25:29:48.16:1704,48,0	1/1:6,17:23:36.12:1317,36,0	0/0:30,0:30:84.28:0,84,4666	0/0:24,0:24:72.25:0,72,4230	0/0:28,0:28:75.25:0,75,4321	0/0:13,0:13:36.12:0,36,2004	1/1:4,23:27:39.02:1426,39,0	0/0:12,0:12:33.11:0,33,1924	0/0:23,0:23:66.22:0,66,3787	0/0:22,0:22:63.22:0,63,3818	0/0:20,0:20:54.16:0,54,2911	1/1:9,18:27:36.05:1225,36,0	0/0:19,0:19:54.19:0,54,3014	0/0:12,0:12:27.09:0,27,1382	0/0:25,0:25:63.22:0,63,3689	0/0:27,0:27:78.25:0,78,4474	0/0:18,0:18:51.18:0,51,2946	1/1:4,10:14:20.41:767,20,0	1/1:6,14:20:24.08:803,24,0	0/0:29,0:29:78.27:0,78,4496	0/0:27,0:27:72.25:0,72,4282	0/0:30,0:29:75.24:0,75,4160	0/0:8,0:8:24.08:0,24,1328
chr10	41513794	.	C	CA	8631.66	PASS	AB=1.000;AC=37;AF=0.661;AN=56;BaseQRankSum=-5.577;DP=623;FS=1.078;HRun=9;HaplotypeScore=71.6839;InbreedingCoeff=0.8776;MQ=71.62;MQ0=1;MQRankSum=0.444;QD=20.55;ReadPosRankSum=0.929;VQSLOD=5.5195;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,1:40:67.81:0,68,806	0/0:9,0:9:26.99:0,27,234	0/1:22,0:17:3.63:4,0,152	0/0:15,0:14:7.80:0,8,85	0/0:34,0:35:82.99:0,83,705	1/1:5,19:24:54.15:597,54,0	1/1:2,21:23:28.09:538,28,0	1/1:4,2:27:65.82:374,66,0	0/0:12,0:12:2.76:0,3,248	1/1:5,18:23:54.13:587,54,0	1/1:4,27:31:81.22:890,81,0	1/1:2,13:15:39.11:431,39,0	0/0:26,0:26:71.96:0,72,621	0/0:14,0:14:35.97:0,36,309	1/1:3,17:20:48.13:531,48,0	0/0:24,0:24:65.97:0,66,569	1/1:4,18:22:51.14:564,51,0	1/1:5,18:23:31.10:571,31,0	1/1:5,2:22:46.72:291,47,0	1/1:2,0:29:76.95:395,77,0	1/1:2,1:11:17.04:85,17,0	0/0:26,1:27:41.78:0,42,588	1/1:3,13:16:36.10:398,36,0	1/1:4,14:18:42.11:465,42,0	1/1:4,28:32:81.22:896,81,0	1/1:7,18:25:30.72:570,31,0	1/1:6,1:35:82.39:428,82,0	1/1:0,0:1:2.84:14,3,0
chr10	41514667	.	CCACA	C	1203.25	PASS	AB=0.803;AC=11;AF=0.212;AN=52;BaseQRankSum=-1.348;DP=711;FS=6.995;HRun=0;HaplotypeScore=176.4326;InbreedingCoeff=0.5209;MQ=56.93;MQ0=12;MQRankSum=1.039;QD=6.68;ReadPosRankSum=3.523;VQSLOD=2.2084;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:29,6:38:8.37:220,8,0	0/0:14,0:14:12.02:0,12,204	./.	./.	1/1:12,1:18:3:28,3,0	0/0:17,0:17:6.02:0,6,96	0/0:46,0:46:30.34:0,30,402	0/0:35,0:34:25.17:0,25,287	0/0:18,2:27:25.16:0,25,167	0/0:31,0:31:24.08:0,24,440	0/0:18,0:18:12.04:0,12,213	0/0:28,0:28:12.40:0,12,148	0/1:14,8:29:71.81:175,0,72	1/1:30,8:38:45.05:562,45,0	0/0:32,0:32:55.43:0,55,912	1/1:16,6:25:21.05:287,21,0	0/0:22,0:23:18.02:0,18,299	0/0:21,0:19:21.38:0,21,327	0/0:18,0:17:20.86:0,21,317	0/0:24,0:24:15.04:0,15,263	0/0:28,0:25:23.85:0,24,319	0/1:14,1:21:12.91:60,0,13	0/0:12,0:12:6:0,6,72	0/0:46,0:48:39.92:0,40,487	0/0:14,0:14:6.02:0,6,111	0/0:28,0:28:24.08:0,24,405	0/0:19,0:19:28.69:0,29,377	0/1:7,0:9:27.46:27,0,194
chr10	41514700	.	C	CAG	418.35	PASS	AB=0.947;AC=9;AF=0.161;AN=56;BaseQRankSum=6.283;DP=880;FS=1.352;HRun=0;HaplotypeScore=198.8363;InbreedingCoeff=-0.0082;MQ=52.48;MQ0=21;MQRankSum=1.518;QD=1.76;ReadPosRankSum=3.673;VQSLOD=2.3757;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:51:25.67:0,26,482	0/0:17,0:17:36.31:0,36,350	0/0:22,0:8:24.02:0,24,251	0/0:33,0:21:39.14:0,39,430	0/1:22,0:22:2.02:2,0,219	0/1:14,16:29:18.59:19,0,62	0/1:44,1:43:99:382,0,139	0/0:38,0:36:83.53:0,84,677	0/0:41,0:41:92.50:0,93,731	0/0:28,0:28:27.41:0,27,549	0/0:16,0:16:11.37:0,11,240	0/0:33,0:33:4.01:0,4,72	0/0:39,0:39:89.59:0,90,702	0/1:47,0:46:43.01:43,0,425	0/0:34,0:33:1.74:0,2,414	0/1:38,0:37:70.20:70,0,296	0/0:23,0:22:41.71:0,42,316	0/1:25,0:23:5.34:5,0,281	0/0:21,0:21:19.96:0,20,252	0/0:26,0:26:24.83:0,25,227	0/0:59,0:54:93.94:0,94,791	0/0:29,0:29:58.81:0,59,459	1/1:20,0:20:2.33:15,2,0	0/0:53,0:52:25.58:0,26,426	0/0:23,0:22:35.65:0,36,314	0/0:34,0:33:65.53:0,66,542	0/0:21,0:20:30.37:0,30,266	0/1:11,0:10:5.30:5,0,62
chr10	41514706	.	C	CACACACAG	8951.36	PASS	AB=0.952;AC=35;AF=0.625;AN=56;BaseQRankSum=-6.526;DP=896;FS=4.450;HRun=0;HaplotypeScore=264.4628;InbreedingCoeff=0.2977;MQ=53.60;MQ0=19;MQRankSum=3.622;QD=12.82;ReadPosRankSum=-2.357;VQSLOD=3.3562;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:51,0:51:99:422,0,137	0/0:16,0:16:38.93:0,39,340	0/0:25,0:10:26.95:0,27,257	0/0:40,0:27:65.67:0,66,574	1/1:20,0:20:21.73:210,22,0	1/1:28,0:27:11.69:155,12,0	1/1:43,0:42:75.39:747,75,0	1/1:40,0:39:30.01:536,30,0	0/0:47,0:47:86.78:0,87,852	0/1:24,0:25:99:260,0,179	0/1:14,0:16:8.61:146,0,9	1/1:11,0:35:10.42:165,10,0	0/0:40,0:40:80.94:0,81,1025	0/1:43,0:43:99:329,0,268	0/1:26,0:34:57.56:381,0,58	0/1:39,0:38:99:349,0,179	1/1:22,0:21:15.61:346,16,0	0/1:21,0:22:99:167,0,113	1/1:20,0:20:41.71:460,42,0	1/1:28,0:30:47.18:551,47,0	1/1:58,0:54:88.27:937,88,0	0/0:30,0:30:47.51:0,48,505	1/1:4,15:22:5.60:144,6,0	1/1:49,3:54:79.54:1007,80,0	0/1:22,0:22:38.97:249,0,39	1/1:33,0:33:31.40:641,31,0	1/1:20,1:20:7.57:503,8,0	0/1:12,0:11:7.01:245,0,7
chr10	41514785	.	T	TAC	17865.84	PASS	AB=0.631;AC=30;AF=0.536;AN=56;BaseQRankSum=-12.872;DP=1035;FS=1.950;HRun=0;HaplotypeScore=160.9763;InbreedingCoeff=0.8511;MQ=60.31;MQ0=6;MQRankSum=1.438;QD=30.33;ReadPosRankSum=-0.255;VQSLOD=6.2418;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:20,33:53:99:1783,120,0	0/0:8,0:8:18.06:0,18,219	0/0:48,0:25:31.33:0,31,352	0/0:52,0:36:30.99:0,31,294	1/1:8,12:20:48.15:745,48,0	0/0:28,0:28:69.12:0,69,808	0/0:35,0:36:42.21:0,42,668	1/1:19,25:44:31.21:1141,31,0	0/0:52,0:52:99:0,126,1512	1/1:18,20:38:99:1452,100,0	1/1:3,14:17:36.12:568,36,0	0/0:49,0:50:99:0,121,1445	0/0:44,0:44:99:0,120,1414	1/1:15,42:57:83.53:1828,84,0	1/1:9,36:45:99:1882,120,0	1/1:16,28:44:66.85:1487,67,0	0/0:16,0:17:37.95:0,38,406	1/1:6,19:26:14:701,14,0	0/1:12,11:20:31.17:513,0,31	1/1:5,23:28:50.42:823,50,0	0/1:30,71:102:87.99:2190,0,88	0/0:37,0:37:93.29:0,93,1130	0/0:22,0:22:51.16:0,51,622	0/0:48,0:50:79.48:0,79,1027	1/1:13,16:28:57.19:909,57,0	1/1:7,29:36:78.21:1163,78,0	1/1:4,15:18:24.07:388,24,0	1/1:1,6:7:18.06:292,18,0
chr10	41514855	.	TCA	T	3429.25	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=10.820;DP=978;FS=0.382;HRun=0;HaplotypeScore=169.2975;InbreedingCoeff=0.9995;MQ=60.52;MQ0=5;MQRankSum=2.746;QD=23.81;ReadPosRankSum=-0.357;VQSLOD=4.1414;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:12,26:38:81.66:972,82,0	0/0:12,0:12:33.11:0,33,541	0/0:37,0:21:42.11:0,42,603	0/0:42,0:35:62.57:0,63,977	1/1:8,17:25:48.15:589,48,0	0/0:17,0:17:33.08:0,33,490	0/0:42,1:43:59.10:0,59,1454	0/0:49,0:49:99:0,99,1580	0/0:47,1:48:89.20:0,89,1922	0/0:42,1:43:59.18:0,59,1462	0/0:14,0:14:33.11:0,33,539	0/0:49,0:49:99:0,99,1575	0/0:45,0:45:91.56:0,92,1797	1/1:15,25:39:69.09:801,69,0	0/0:42,1:42:50.06:0,50,1283	1/1:11,30:41:44.08:1066,44,0	0/0:22,0:22:46.88:0,47,711	0/0:26,0:26:48.16:0,48,786	0/0:20,0:20:36.12:0,36,587	0/0:25,0:25:54.17:0,54,860	0/0:94,0:94:99:0,198,3224	0/0:28,0:28:72.23:0,72,1156	0/0:28,1:29:29.27:0,29,977	0/0:49,3:51:39.96:0,40,1665	0/0:30,0:29:58.19:0,58,1228	0/0:29,0:29:72.70:0,73,1121	0/0:21,0:21:48.16:0,48,776	0/0:16,0:16:42.14:0,42,682
chr10	41514931	.	T	TAC	10794.49	PASS	AB=0.800;AC=22;AF=0.393;AN=56;BaseQRankSum=-16.590;DP=1046;FS=0.000;HRun=0;HaplotypeScore=173.5231;InbreedingCoeff=0.8324;MQ=60.82;MQ0=15;MQRankSum=1.764;QD=23.52;ReadPosRankSum=0.782;VQSLOD=4.9188;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:45:82.17:0,82,405	0/0:7,0:7:14.98:0,15,156	0/0:62,0:23:6.52:0,7,221	0/1:70,0:37:38.69:39,0,259	0/0:8,0:33:67.81:0,68,331	1/1:7,18:24:12.21:683,12,0	1/1:14,23:37:18.24:779,18,0	0/0:43,1:44:15.16:0,15,642	0/0:44,0:45:99:0,108,1259	1/1:14,26:40:87.23:1283,87,0	0/1:5,10:15:5.85:401,0,6	1/1:10,38:48:54.35:1355,54,0	0/0:44,0:46:99:0,117,1316	0/0:8,0:35:82.05:0,82,408	1/1:7,45:53:70.29:1772,70,0	0/0:9,0:47:99:0,107,524	1/1:4,24:28:10.71:858,11,0	1/1:6,23:30:57.38:1043,57,0	0/0:21,0:21:42.12:0,42,492	0/0:13,0:13:33.10:0,33,395	0/0:74,0:76:99:0,114,1306	0/0:29,0:29:72.17:0,72,835	1/1:7,16:23:33.11:525,33,0	1/1:21,35:58:12.15:1175,12,0	1/1:9,22:31:26.30:881,26,0	0/0:38,0:38:78.21:0,78,907	0/0:23,0:23:45.14:0,45,539	0/0:19,0:19:45.14:0,45,539
chr10	41515005	.	T	TCACACA	9471.53	PASS	AB=0.816;AC=43;AF=0.768;AN=56;BaseQRankSum=3.689;DP=873;FS=9.272;HRun=0;HaplotypeScore=278.4500;InbreedingCoeff=0.8281;MQ=56.03;MQ0=12;MQRankSum=-6.034;QD=13.65;ReadPosRankSum=-4.850;VQSLOD=2.2213;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:50,0:57:54.21:657,54,0	0/0:11,0:13:24.96:0,25,445	0/0:40,0:18:2.07:0,2,29	0/0:51,0:33:5.19:0,5,74	1/1:19,0:21:20.86:206,21,0	1/1:17,0:20:30.98:406,31,0	1/1:34,0:39:31.79:416,32,0	1/1:41,0:38:35.90:548,36,0	0/0:28,0:28:62.99:0,63,1172	1/1:36,0:35:54.68:685,55,0	1/1:15,0:15:19.41:287,19,0	1/1:30,12:43:54.14:1168,54,0	0/0:25,0:25:14.82:0,15,1074	1/1:33,0:36:26.18:471,26,0	1/1:37,0:42:17.86:228,18,0	0/1:23,0:30:2.32:547,0,2	1/1:23,0:29:30.53:583,31,0	1/1:14,0:18:21.05:379,21,0	1/1:28,0:25:29.99:415,30,0	1/1:24,0:23:8.79:98,9,0	1/1:49,0:51:17.19:172,17,0	0/0:20,0:20:33.01:0,33,645	1/1:18,5:23:24.08:591,24,0	1/1:26,8:38:13.83:276,14,0	1/1:25,0:27:18.69:271,19,0	1/1:32,0:31:55.73:648,56,0	1/1:9,0:23:8.87:165,9,0	1/1:14,0:14:17.48:252,17,0
chr10	41515009	.	A	ACACACACACACA	16008.39	PASS	AB=1.000;AC=43;AF=0.768;AN=56;BaseQRankSum=-1.999;DP=888;FS=12.520;HRun=0;HaplotypeScore=339.5551;InbreedingCoeff=0.7934;MQ=51.42;MQ0=12;MQRankSum=-5.308;QD=22.67;ReadPosRankSum=-4.008;VQSLOD=2.1285;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:58,0:58:56.18:1092,56,0	0/0:14,0:14:27.09:0,27,777	0/0:38,0:14:2.35:0,2,29	0/0:52,0:31:5.50:0,6,56	1/1:19,0:18:20.37:370,20,0	1/1:19,0:19:27.70:728,28,0	1/1:39,0:39:23.73:558,24,0	1/1:41,0:38:52.52:1011,53,0	0/0:26,0:25:63.20:0,63,1804	1/1:34,0:33:56.68:1228,57,0	1/1:19,0:19:24.08:491,24,0	1/1:39,0:38:55.13:929,55,0	0/0:27,0:27:17.83:0,18,1733	1/1:36,0:34:36.83:1023,37,0	1/1:43,0:42:20.95:606,21,0	0/1:33,0:32:42.30:1078,0,42	1/1:30,0:30:37.01:957,37,0	1/1:19,0:19:21.07:881,21,0	1/1:23,8:31:57.77:1307,58,0	1/1:25,0:24:11.93:209,12,0	1/1:59,0:57:17.67:248,18,0	0/0:25,0:25:33.97:0,34,982	1/1:23,0:23:23.97:423,24,0	1/1:40,0:40:6.71:161,7,0	1/1:27,0:27:17.11:409,17,0	1/1:32,0:31:63.22:1591,63,0	1/1:21,0:21:9.03:271,9,0	1/1:15,0:15:18.06:438,18,0
chr10	41515491	.	CA	C	5196.38	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-1.953;DP=686;FS=10.254;HRun=1;HaplotypeScore=91.3864;InbreedingCoeff=0.9996;MQ=82.53;MQ0=0;MQRankSum=-2.991;QD=40.28;ReadPosRankSum=-2.518;VQSLOD=3.4852;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,130,907	0/0:11,0:11:33.11:0,33,528	0/0:25,0:25:69.07:0,69,975	0/0:14,0:14:30.44:0,30,414	0/0:29,0:29:85.50:0,86,655	0/0:26,0:26:78.25:0,78,1219	0/0:27,0:27:81.28:0,81,1293	1/1:0,33:33:99:1367,99,0	0/0:35,0:35:99:0,102,1598	0/0:29,0:29:77.81:0,78,529	0/0:20,0:20:56.28:0,56,395	0/0:25,0:25:72.20:0,72,1059	0/0:26,0:26:78.27:0,78,1247	0/0:25,0:25:74.07:0,74,513	0/0:34,0:34:89.02:0,89,650	0/0:28,0:28:46.89:0,47,457	0/0:41,0:41:99:0,120,1892	0/0:27,0:27:53.20:0,53,492	1/1:0,12:12:36.12:503,36,0	1/1:0,17:17:48.16:671,48,0	1/1:0,17:17:48.16:671,48,0	0/0:22,0:22:63.21:0,63,1002	0/0:25,0:25:72.25:0,72,1148	0/0:27,0:27:81.28:0,81,1292	0/0:16,0:16:47.58:0,48,355	1/1:1,17:18:29.22:687,29,0	1/1:0,22:22:63.21:879,63,0	1/1:0,10:10:30.10:419,30,0
chr10	41515864	.	A	AT	4643.47	PASS	AB=0.848;AC=24;AF=0.429;AN=56;BaseQRankSum=-4.396;DP=441;FS=6.171;HRun=10;HaplotypeScore=46.8234;InbreedingCoeff=0.8600;MQ=66.92;MQ0=1;MQRankSum=0.008;QD=22.11;ReadPosRankSum=-0.465;VQSLOD=5.4607;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:53.88:0,54,435	0/0:8,0:8:20.94:0,21,168	0/0:10,0:9:14.54:0,15,108	0/1:4,0:4:0.01:0,0,0	0/0:23,0:23:56.92:0,57,468	0/0:16,0:16:47.95:0,48,394	0/0:12,0:12:32.95:0,33,271	1/1:7,27:34:81.17:848,81,0	0/0:14,0:14:35.92:0,36,292	1/1:6,11:17:11.44:325,11,0	1/1:3,9:12:5.97:252,6,0	0/0:11,0:11:29.95:0,30,243	0/0:16,0:16:44.93:0,45,369	0/0:18,0:18:50.92:0,51,416	1/1:0,8:8:21.05:224,21,0	0/0:16,0:16:41.93:0,42,341	0/0:34,0:34:86.89:0,87,714	1/1:1,19:20:57.14:608,57,0	1/1:9,16:26:4.64:418,5,0	1/1:3,11:14:30.08:319,30,0	1/1:0,9:9:21.05:224,21,0	0/0:8,0:8:20.97:0,21,172	0/0:15,0:15:41.94:0,42,345	0/0:8,0:8:23.97:0,24,197	0/1:9,7:16:9.61:113,0,10	1/1:1,19:20:57.09:587,57,0	1/1:2,12:15:11.11:309,11,0	1/1:2,13:15:39.10:416,39,0
chr10	41518251	.	C	CCA	1625.90	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-8.588;DP=697;FS=6.559;HRun=0;HaplotypeScore=90.5283;InbreedingCoeff=0.9628;MQ=88.13;MQ0=0;MQRankSum=-3.648;QD=41.69;ReadPosRankSum=1.729;VQSLOD=5.2077;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,117,1491	0/0:7,0:7:12.04:0,12,154	0/0:31,0:31:48.19:0,48,707	0/0:25,0:25:60.03:0,60,694	0/0:22,0:22:60.03:0,60,746	0/0:16,0:16:45.15:0,45,579	0/0:28,0:28:75.24:0,75,965	0/0:23,0:23:54.16:0,54,670	0/0:24,0:24:69.21:0,69,873	0/0:20,0:20:54.17:0,54,683	0/0:20,0:20:48.05:0,48,548	0/0:26,0:26:75.21:0,75,937	0/0:23,0:23:60.19:0,60,771	0/0:26,0:26:72.20:0,72,891	0/0:19,0:19:45.15:0,45,579	0/0:24,0:24:66.21:0,66,846	1/1:5,34:39:99:1721,102,0	0/0:24,0:24:63.13:0,63,762	0/0:26,0:26:66.11:0,66,821	0/0:23,0:23:63.18:0,63,811	0/0:47,0:47:99:0,117,1462	0/0:20,0:20:51.16:0,51,644	0/0:18,0:18:51.17:0,51,655	0/0:44,0:44:99:0,117,1478	0/0:20,0:20:54.17:0,54,692	0/0:27,0:27:69.22:0,69,883	0/0:22,0:22:51.15:0,51,641	0/0:6,0:6:18.06:0,18,232
chr10	41519479	.	GT	G	942.84	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.509;DP=543;FS=4.157;HRun=7;HaplotypeScore=51.2764;InbreedingCoeff=0.9856;MQ=73.57;MQ0=0;MQRankSum=-2.799;QD=23.57;ReadPosRankSum=1.990;VQSLOD=3.8425;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:63.17:0,63,776	0/0:6,0:6:18.06:0,18,226	0/0:16,0:15:39.10:0,39,472	0/0:11,0:11:15.05:0,15,183	1/1:4,15:19:48.09:483,48,0	0/0:24,0:24:57.17:0,57,706	0/0:9,0:9:27.08:0,27,328	0/0:27,0:26:75.24:0,75,942	0/0:22,0:22:66.21:0,66,830	0/0:27,0:27:63.20:0,63,792	0/0:28,0:28:81.26:0,81,1015	0/0:9,0:9:24.07:0,24,291	0/0:21,0:21:60.19:0,60,754	1/1:1,20:21:57.13:581,57,0	0/0:16,0:16:45.14:0,45,566	0/0:21,0:21:54.16:0,54,667	0/0:20,0:20:60.19:0,60,755	0/0:20,0:20:60.19:0,60,753	0/0:27,0:27:78.23:0,78,956	0/0:22,0:22:66.21:0,66,830	0/0:19,0:19:57.16:0,57,691	0/0:10,0:10:27.08:0,27,328	0/0:17,0:17:42.13:0,42,517	0/0:12,0:12:36.11:0,36,451	0/0:28,0:28:78.19:0,78,928	0/0:29,0:29:78.25:0,78,979	0/0:21,0:21:63.20:0,63,793	0/0:18,0:18:54.17:0,54,679
chr10	41519834	.	TG	T	3844.17	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=3.611;DP=571;FS=0.000;HRun=5;HaplotypeScore=66.5595;InbreedingCoeff=0.9076;MQ=80.48;MQ0=0;MQRankSum=0.193;QD=23.88;ReadPosRankSum=-1.750;VQSLOD=2.0349;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,138,1797	0/0:8,0:8:24.08:0,24,328	0/0:19,0:18:32.37:0,32,361	0/0:16,0:15:31.72:0,32,405	0/0:24,0:24:66.16:0,66,831	0/0:24,0:24:66.15:0,66,833	0/0:18,0:18:48.14:0,48,639	1/1:3,21:24:60.10:632,60,0	0/0:11,0:11:33.10:0,33,436	0/1:25,0:25:93.76:94,0,138	0/0:19,0:19:52.23:0,52,244	0/0:11,0:11:30.06:0,30,360	0/0:16,0:16:45.14:0,45,597	0/0:12,0:12:36.10:0,36,460	0/0:18,0:18:28.11:0,28,173	0/0:18,0:18:51.16:0,51,680	0/0:31,0:31:84.19:0,84,1049	0/0:27,0:27:48.21:0,48,291	1/1:2,21:23:63.15:694,63,0	1/1:3,25:28:75.11:815,75,0	1/1:0,12:12:27.08:306,27,0	0/0:16,0:16:48.15:0,48,640	0/0:26,0:26:66.36:0,66,921	0/0:14,0:13:39.13:0,39,533	0/0:33,0:33:60.27:0,60,338	1/1:4,16:20:26.47:453,26,0	1/1:0,19:19:48.14:544,48,0	1/1:0,10:10:27.08:306,27,0
chr10	41520186	.	AT	A	1891.33	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.696;DP=805;FS=1.136;HRun=1;HaplotypeScore=92.8189;InbreedingCoeff=0.9999;MQ=68.53;MQ0=2;MQRankSum=0.019;QD=32.61;ReadPosRankSum=2.860;VQSLOD=3.4787;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:69,0:69:99:0,199,3008	0/0:14,0:14:42.11:0,42,624	0/0:24,0:18:54.13:0,54,778	0/0:30,0:21:54.83:0,55,819	1/1:0,27:28:66.22:923,66,0	0/0:20,0:20:60.20:0,60,956	0/0:33,0:33:99:0,99,1511	0/0:40,0:40:99:0,120,1875	0/0:26,0:26:78.25:0,78,1223	0/0:38,0:38:99:0,111,1726	0/0:17,0:17:48.15:0,48,743	0/0:27,0:27:81.22:0,81,1202	0/0:23,0:23:66.21:0,66,1030	1/1:0,30:30:78.26:1090,78,0	0/0:29,0:29:87.28:0,87,1367	0/0:27,0:27:81.26:0,81,1258	0/0:37,0:37:99:0,111,1722	0/0:30,0:30:87.18:0,87,1297	0/0:21,0:21:60.16:0,60,930	0/0:29,0:29:81.26:0,81,1269	0/0:36,0:36:99:0,108,1699	0/0:20,0:20:60.19:0,60,936	0/0:18,0:18:51.16:0,51,791	0/0:36,0:36:99:0,108,1725	0/0:27,0:27:81.20:0,81,1196	0/0:33,0:33:96.32:0,96,1513	0/0:30,0:30:90.30:0,90,1406	0/0:13,0:13:39.13:0,39,623
chr10	41521436	.	TGTA	T	2439.69	PASS	AB=0.909;AC=16;AF=0.308;AN=52;BaseQRankSum=4.693;DP=693;FS=9.436;HRun=0;HaplotypeScore=117.5363;InbreedingCoeff=0.5499;MQ=69.61;MQ0=10;MQRankSum=1.104;QD=10.38;ReadPosRankSum=1.012;VQSLOD=2.5187;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,1:27:8.86:0,9,723	0/0:11,0:11:24.08:0,24,457	./.	./.	0/0:21,0:22:41.99:0,42,638	0/0:16,0:26:36.10:0,36,493	0/0:8,0:12:15.05:0,15,232	0/0:43,0:43:2.97:0,3,20	0/1:14,2:16:57.47:57,0,198	1/1:11,17:28:51.14:637,51,0	1/1:9,10:20:27.05:335,27,0	0/0:10,0:24:24.06:0,24,300	0/0:20,0:30:39.09:0,39,463	0/0:26,0:26:51.17:0,51,953	1/1:15,24:40:0.99:632,1,0	0/1:27,3:31:27.32:27,0,706	1/1:11,9:21:21.03:256,21,0	1/1:6,9:16:24.04:296,24,0	0/0:19,0:19:27.09:0,27,515	0/1:28,3:31:60.61:61,0,766	0/0:27,0:27:39.10:0,39,707	0/0:13,0:28:24.73:0,25,385	0/0:13,0:21:27.09:0,27,406	0/0:11,0:23:27.09:0,27,371	1/1:12,8:20:24.07:301,24,0	0/0:35,1:36:11.93:0,12,824	0/0:25,0:25:30.10:0,30,572	0/1:11,1:12:18.18:18,0,287
chr10	41521608	.	TG	T	6619.34	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=7.205;DP=795;FS=1.269;HRun=8;HaplotypeScore=147.9488;InbreedingCoeff=0.9996;MQ=72.72;MQ0=0;MQRankSum=-0.929;QD=24.70;ReadPosRankSum=-0.019;VQSLOD=2.9463;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:71.89:0,72,855	0/0:17,0:17:48.14:0,48,569	0/0:21,0:18:35.66:0,36,329	0/0:29,0:28:46.51:0,47,682	1/1:5,37:42:99:1071,111,0	0/0:36,0:36:99:0,103,1219	0/0:14,0:14:36.03:0,36,402	1/1:7,26:32:75.07:707,75,0	0/0:30,0:30:81.23:0,81,963	0/0:39,0:39:99:0,105,1255	0/0:26,0:26:69.19:0,69,811	0/0:10,0:27:51.67:0,52,259	0/0:32,0:32:84.26:0,84,1013	1/1:2,17:19:45.07:434,45,0	0/0:37,0:37:99:0,99,1185	0/0:26,0:26:66.17:0,66,762	0/0:30,0:30:81.16:0,81,935	0/0:8,0:8:24.07:0,24,290	1/1:3,17:20:51.05:481,51,0	1/1:6,36:42:99:1043,108,0	1/1:8,38:46:99:1175,123,0	0/0:22,0:22:66.20:0,66,794	0/0:3,0:28:61.91:0,62,310	0/0:2,0:32:76.97:0,77,397	0/0:41,1:42:91.40:0,91,1375	1/1:4,30:34:90.14:869,90,0	1/1:3,19:22:57.09:550,57,0	1/1:0,10:10:30.05:290,30,0
chr10	41521616	.	GT	G	693.45	PASS	AB=0.978;AC=12;AF=0.214;AN=56;BaseQRankSum=14.021;DP=787;FS=0.648;HRun=1;HaplotypeScore=169.9760;InbreedingCoeff=0.2800;MQ=75.94;MQ0=0;MQRankSum=-0.563;QD=2.42;ReadPosRankSum=3.344;VQSLOD=-0.3306;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:96.17:0,96,1171	0/0:17,0:17:51.10:0,51,654	0/0:16,0:15:34.43:0,34,400	0/0:29,0:29:44.19:0,44,814	0/1:40,1:41:1.55:206,0,2	0/0:36,0:36:99:0,105,1439	0/0:18,0:18:53.79:0,54,611	0/1:33,0:32:16.39:16,0,145	0/0:29,0:29:86.47:0,86,1136	0/0:42,0:42:99:0,126,1628	0/0:25,0:25:68.30:0,68,919	0/1:19,2:21:13.60:14,0,25	0/0:32,0:32:95.95:0,96,1268	0/1:21,0:21:55.83:61,0,56	0/0:34,0:34:99:0,99,1392	0/0:19,0:19:57.15:0,57,766	0/0:31,0:31:81.21:0,81,1106	0/0:11,0:11:33:0,33,404	0/1:23,0:23:24.73:25,0,106	1/1:37,0:37:45.79:187,46,0	0/1:45,1:46:35.16:124,0,35	0/0:24,0:24:72.18:0,72,964	0/0:25,0:25:15.69:0,16,41	0/0:33,0:33:37.01:0,37,166	0/0:43,0:43:99:0,112,1593	1/1:31,1:32:14.21:113,14,0	0/1:21,1:22:6.90:86,0,7	0/1:11,0:11:3.70:23,0,4
chr10	41524480	.	GACACACACACACACACAC	G	957.85	PASS	AB=0.753;AC=13;AF=0.241;AN=54;BaseQRankSum=6.516;DP=415;FS=51.114;HRun=0;HaplotypeScore=176.2104;InbreedingCoeff=0.2981;MQ=80.68;MQ0=8;MQRankSum=-5.055;QD=8.19;ReadPosRankSum=-2.974;VQSLOD=0.2122;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:9.03:0,9,154	0/0:4,0:4:3.01:0,3,240	./.	0/0:41,0:20:3.01:0,3,47	0/0:13,0:13:21.07:0,21,763	0/0:9,0:15:27.07:0,27,555	0/1:16,0:20:69.97:70,0,172	0/0:16,0:16:12.04:0,12,476	0/0:13,0:15:2.50:0,2,129	0/0:19,0:22:25.72:0,26,513	0/0:11,0:11:15.05:0,15,296	1/1:7,5:12:6.01:288,6,0	1/1:6,0:7:2.04:6,2,0	0/0:8,0:9:9.03:0,9,479	0/0:5,0:7:2.45:0,2,105	0/1:6,0:11:66.26:165,0,66	1/1:20,0:22:6.02:203,6,0	0/0:15,0:16:19.70:0,20,517	0/0:7,0:7:3.01:0,3,143	0/0:8,0:8:3.01:0,3,178	0/0:13,0:12:12.04:0,12,535	0/0:8,0:9:5.56:0,6,210	1/1:9,3:12:3.01:76,3,0	1/1:14,4:19:3.83:136,4,0	0/1:9,0:14:99:156,0,139	0/0:12,0:12:15.05:0,15,727	0/0:17,0:17:15.05:0,15,567	0/0:2,0:2:3.01:0,3,100
chr10	41524806	.	CA	C	4360.39	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-3.104;DP=542;FS=6.248;HRun=9;HaplotypeScore=69.5278;InbreedingCoeff=0.9950;MQ=82.42;MQ0=0;MQRankSum=0.600;QD=23.44;ReadPosRankSum=4.046;VQSLOD=5.7233;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:26:72.03:0,72,801	0/0:6,0:6:18.05:0,18,208	0/0:14,0:14:27.06:0,27,298	0/0:18,0:18:36.04:0,36,371	1/1:3,19:22:54.02:494,54,0	0/0:23,0:23:63.19:0,63,727	0/0:19,0:19:48.14:0,48,554	0/0:3,0:29:72.89:0,73,400	0/0:22,0:22:51.15:0,51,589	1/1:4,18:22:54.01:489,54,0	1/1:0,22:22:60.02:549,60,0	1/1:2,9:11:27.01:247,27,0	0/0:18,0:18:45.12:0,45,508	1/1:3,17:20:51.03:467,51,0	1/1:2,22:24:63.03:577,63,0	0/0:21,0:21:60.17:0,60,684	0/0:5,0:24:54.27:0,54,292	1/1:0,11:11:30.02:274,30,0	0/0:2,0:22:57.98:0,58,319	0/0:7,0:29:62.50:0,62,317	0/0:2,0:15:37.21:0,37,202	0/0:15,0:15:42.12:0,42,485	1/1:1,14:15:39.02:357,39,0	1/1:1,23:24:66.03:604,66,0	1/1:2,13:15:33.01:302,33,0	0/0:3,1:20:22.35:0,22,217	0/0:6,0:24:51.32:0,51,270	0/0:2,0:9:14.20:0,14,72
chr10	41526226	.	TA	T	13339.87	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=15.548;DP=613;FS=1.323;HRun=1;HaplotypeScore=100.1857;InbreedingCoeff=0.9948;MQ=90.30;MQ0=0;MQRankSum=-5.291;QD=38.22;ReadPosRankSum=-0.215;VQSLOD=4.7855;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:84.24:0,84,1291	0/0:4,0:4:12.04:0,12,192	0/0:30,0:30:84.52:0,85,1294	0/0:19,0:19:45.11:0,45,671	0/0:17,0:17:48.16:0,48,767	1/1:0,21:21:60.20:839,60,0	1/1:0,20:20:54.18:754,54,0	1/1:0,26:26:78.22:1067,78,0	1/1:0,17:17:48.16:670,48,0	1/1:0,16:15:45.15:625,45,0	1/1:0,14:14:33.11:461,33,0	0/0:25,0:25:75.24:0,75,1167	1/1:1,27:28:81.27:1123,81,0	0/0:21,0:21:63.21:0,63,1007	1/1:0,25:25:63.21:881,63,0	0/0:28,0:28:84.25:0,84,1278	0/0:37,0:37:99:0,111,1742	1/1:0,28:28:72.24:1007,72,0	1/1:0,18:18:51.15:683,51,0	1/1:0,7:7:21.07:294,21,0	1/1:1,42:43:99:1508,108,0	1/1:0,18:18:45.13:627,45,0	0/0:17,0:17:51.16:0,51,784	0/0:37,0:37:99:0,111,1772	1/1:0,17:17:51.17:713,51,0	1/1:0,24:24:69.23:955,69,0	1/1:0,18:18:54.18:755,54,0	1/1:0,9:9:27.09:378,27,0
chr10	41527468	.	AT	A	15518.57	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=1.413;DP=627;FS=18.697;HRun=6;HaplotypeScore=72.3420;InbreedingCoeff=0.9883;MQ=84.61;MQ0=0;MQRankSum=-8.817;QD=27.18;ReadPosRankSum=4.946;VQSLOD=3.2899;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,33:36:78.19:838,78,0	0/0:13,0:13:36.09:0,36,456	0/0:21,0:21:54.05:0,54,652	0/0:22,0:22:50.50:0,50,612	1/1:1,29:30:81.20:871,81,0	1/1:2,26:28:66.16:709,66,0	1/1:2,22:24:63.16:677,63,0	1/1:2,21:23:63.16:677,63,0	1/1:1,21:22:63.16:677,63,0	1/1:3,27:30:78.18:830,78,0	1/1:2,20:22:54.13:580,54,0	1/1:1,23:24:57.14:612,57,0	1/1:1,17:18:42.11:451,42,0	1/1:3,18:20:42.10:451,42,0	1/1:1,24:25:54.14:580,54,0	1/1:0,22:22:60.15:645,60,0	1/1:0,21:21:57.14:613,57,0	1/1:1,10:11:24.06:258,24,0	1/1:2,20:22:54.09:567,54,0	1/1:1,22:23:66.16:709,66,0	1/1:2,23:25:63.16:677,63,0	1/1:0,21:21:60.15:644,60,0	1/1:0,22:22:60.15:645,60,0	1/1:1,19:20:57.14:613,57,0	1/1:1,21:22:51.13:548,51,0	1/1:3,25:28:72.18:773,72,0	1/1:0,26:26:69.17:741,69,0	1/1:0,4:4:12.03:129,12,0
chr10	41527634	.	C	CAAAAA	13253.96	PASS	AB=0.915;AC=52;AF=0.929;AN=56;BaseQRankSum=1.188;DP=554;FS=2.632;HRun=16;HaplotypeScore=210.4454;InbreedingCoeff=0.5592;MQ=65.23;MQ0=1;MQRankSum=-4.351;QD=24.19;ReadPosRankSum=-1.368;VQSLOD=1.1471;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:26:52.89:871,53,0	0/0:5,0:6:14.93:0,15,195	0/1:27,0:21:1.49:1,0,103	0/1:14,0:11:3.77:4,0,40	1/1:33,0:28:48.11:915,48,0	1/1:23,0:22:39.13:848,39,0	1/1:7,0:7:9.02:170,9,0	1/1:27,0:27:37.88:634,38,0	1/1:13,0:13:12.04:285,12,0	1/1:16,6:24:33.02:528,33,0	1/1:16,6:21:34.83:539,35,0	1/1:22,0:22:45.12:823,45,0	1/1:7,0:7:12.04:286,12,0	1/1:15,0:13:15.04:205,15,0	1/1:31,0:31:47.41:781,47,0	1/1:17,0:17:24.08:526,24,0	1/1:15,0:14:12.04:270,12,0	1/1:10,0:10:15.05:257,15,0	1/1:30,0:27:39.06:709,39,0	1/1:30,0:30:35.29:578,35,0	1/1:4,0:4:3.48:44,3,0	1/1:11,0:11:17.42:364,17,0	1/1:30,0:29:53.57:791,54,0	1/1:12,0:12:12.09:164,12,0	1/1:25,0:31:39.13:777,39,0	1/1:13,0:13:27.09:543,27,0	1/1:30,0:29:60.79:1191,61,0	1/1:15,0:14:7.58:148,8,0
chr10	41527649	.	A	AGAG	780.20	PASS	AB=0.641;AC=3;AF=0.054;AN=56;BaseQRankSum=-0.683;DP=555;FS=13.504;HRun=0;HaplotypeScore=161.4311;InbreedingCoeff=-0.0611;MQ=56.58;MQ0=2;MQRankSum=-2.955;QD=9.40;ReadPosRankSum=1.747;VQSLOD=2.4366;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:25:53.55:0,54,486	0/0:9,0:9:27.09:0,27,437	0/0:25,0:11:17.44:0,17,270	0/0:17,0:9:19.05:0,19,168	0/0:31,0:26:61.24:0,61,675	0/0:21,0:20:52.66:0,53,633	0/0:8,0:8:16.72:0,17,177	0/0:29,0:29:60.84:0,61,643	0/0:5,0:5:15.05:0,15,206	0/0:17,0:17:36.32:0,36,407	0/0:21,0:20:52.89:0,53,524	0/1:11,13:27:94.20:407,0,94	0/0:8,0:8:18.42:0,18,214	0/0:13,0:11:22.34:0,22,198	0/0:29,0:29:52.80:0,53,613	0/0:16,0:16:35.88:0,36,394	0/0:16,0:15:32.41:0,32,296	0/0:11,0:11:26.85:0,27,267	0/0:35,0:32:80.73:0,81,959	0/0:30,0:29:63.44:0,63,627	0/0:5,0:5:5.89:0,6,62	0/0:12,0:12:28.32:0,28,369	0/1:18,16:36:99:406,0,127	0/1:8,10:19:25.12:68,0,25	0/0:28,0:28:58.98:0,59,602	0/0:15,0:15:36.65:0,37,461	0/0:30,0:29:61.27:0,61,649	0/0:15,0:14:23.44:0,23,202
chr10	41527915	.	A	AC	11824.40	PASS	AB=0.861;AC=50;AF=0.893;AN=56;BaseQRankSum=3.456;DP=582;FS=8.785;HRun=0;HaplotypeScore=197.4787;InbreedingCoeff=0.5327;MQ=57.87;MQ0=0;MQRankSum=-1.006;QD=21.31;ReadPosRankSum=2.751;VQSLOD=4.4426;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:17,4:21:50.74:513,51,0	0/0:8,0:8:24.08:0,24,336	0/1:9,0:2:8.01:12,0,8	0/0:19,0:11:2.01:0,2,191	1/1:19,9:26:41.38:404,41,0	1/1:14,5:19:44.81:447,45,0	1/1:9,9:18:31.47:282,31,0	1/1:0,30:30:85.68:580,86,0	1/1:11,1:12:30.07:322,30,0	1/1:21,9:30:83.57:882,84,0	1/1:19,3:21:53.18:499,53,0	1/1:5,14:19:44.82:271,45,0	1/1:13,6:19:49.88:477,50,0	1/1:14,3:17:42.12:500,42,0	1/1:23,9:32:74.01:746,74,0	1/1:12,9:21:49.76:459,50,0	1/1:12,3:15:38.64:376,39,0	1/1:13,2:15:30.08:327,30,0	0/1:8,5:13:53.92:220,0,54	1/1:25,13:38:73.79:734,74,0	1/1:19,5:24:54.08:565,54,0	1/1:5,3:8:12.03:129,12,0	1/1:14,19:32:56.29:444,56,0	1/1:5,4:9:8.96:89,9,0	1/1:21,4:25:49.94:482,50,0	1/1:26,6:32:95.78:1100,96,0	1/1:26,10:35:88.43:827,88,0	1/1:10,0:9:17.60:139,18,0
chr10	41527918	.	AG	A	9147.93	PASS	AB=0.706;AC=51;AF=0.911;AN=56;BaseQRankSum=4.284;DP=574;FS=2.074;HRun=1;HaplotypeScore=205.5726;InbreedingCoeff=0.6962;MQ=55.32;MQ0=0;MQRankSum=0.336;QD=16.66;ReadPosRankSum=3.123;VQSLOD=5.1833;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:17,4:21:49.55:395,50,0	0/0:8,0:8:24.08:0,24,384	1/1:9,0:2:5.61:45,6,0	0/0:17,0:9:17.84:0,18,271	1/1:20,9:27:42.81:342,43,0	1/1:15,5:20:46.88:397,47,0	1/1:9,9:18:27.37:216,27,0	1/1:0,26:26:69.24:317,69,0	1/1:11,1:12:30:264,30,0	1/1:20,9:29:78.54:694,79,0	1/1:20,3:22:50.53:391,51,0	1/1:5,14:19:36.26:224,36,0	1/1:13,6:19:43.39:334,43,0	1/1:11,3:14:33.02:298,33,0	1/1:24,9:33:73.72:621,74,0	1/1:15,9:24:54.98:432,55,0	1/1:12,3:15:37.48:298,37,0	1/1:15,2:17:36.02:348,36,0	0/1:7,5:12:69.59:122,0,70	1/1:22,13:35:62.06:456,62,0	1/1:19,5:24:56.80:498,57,0	1/1:6,3:9:15:130,15,0	1/1:15,19:33:46.61:311,47,0	1/1:4,4:8:5.95:52,6,0	1/1:21,4:25:46.38:362,46,0	1/1:25,6:31:91.26:891,91,0	1/1:24,10:33:81.39:609,81,0	1/1:9,0:8:16.31:103,16,0
chr10	41529624	.	TAA	T	8568.82	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=1.311;DP=375;FS=8.468;HRun=9;HaplotypeScore=58.4043;InbreedingCoeff=0.9393;MQ=61.90;MQ0=2;MQRankSum=-0.512;QD=25.35;ReadPosRankSum=2.244;VQSLOD=3.8717;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,34:38:75.14:854,75,0	0/0:5,0:5:9.03:0,9,148	0/0:3,0:2:6.02:0,6,82	0/0:6,0:5:15.03:0,15,194	1/1:4,13:17:36.10:419,36,0	1/1:0,16:16:33.10:385,33,0	1/1:0,10:9:27.08:312,27,0	1/1:7,16:21:48.13:553,48,0	1/1:4,10:14:17.85:210,18,0	1/1:3,15:18:45.11:511,45,0	1/1:0,19:19:54.09:608,54,0	0/0:8,0:8:21.07:0,21,345	1/1:0,11:11:30.09:349,30,0	1/1:0,9:9:18.05:210,18,0	1/1:0,9:9:24.07:280,24,0	1/1:0,13:13:27.08:315,27,0	1/1:6,17:23:54.14:628,54,0	1/1:2,11:14:17.80:271,18,0	1/1:1,14:15:42.10:470,42,0	1/1:0,10:10:29.97:314,30,0	1/1:0,12:12:30.02:332,30,0	1/1:0,9:9:23.98:260,24,0	0/0:3,0:3:9.03:0,9,131	0/0:12,0:12:33.11:0,33,542	1/1:0,16:16:33.10:384,33,0	1/1:2,13:15:39.11:455,39,0	1/1:0,16:16:24.07:280,24,0	1/1:3,8:11:15.04:170,15,0
chr10	41529788	.	G	GT	17001.57	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-0.252;DP=530;FS=6.537;HRun=2;HaplotypeScore=98.7947;InbreedingCoeff=0.9584;MQ=93.42;MQ0=0;MQRankSum=-5.416;QD=42.93;ReadPosRankSum=3.716;VQSLOD=3.8268;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,48:48:99:2205,138,0	0/0:7,0:7:21.07:0,21,291	0/0:20,0:21:50.47:0,50,793	0/0:25,0:25:75.19:0,75,977	1/1:0,9:9:24.08:383,24,0	1/1:1,19:20:59.99:924,60,0	1/1:0,26:26:75.26:1199,75,0	1/1:0,20:20:60.18:913,60,0	1/1:0,23:23:66.23:1055,66,0	0/0:25,0:25:72.23:0,72,971	0/0:8,0:8:21.07:0,21,294	1/1:0,16:16:45.15:719,45,0	1/1:0,30:30:90.28:1411,90,0	1/1:0,18:18:45.12:719,45,0	0/0:22,0:22:66.22:0,66,923	1/1:0,15:15:39.13:623,39,0	1/1:0,30:30:81.28:1294,81,0	0/0:12,0:12:36.12:0,36,503	1/1:1,17:18:51.15:787,51,0	1/1:0,11:11:23.81:383,24,0	1/1:1,29:30:81.28:1294,81,0	1/1:0,4:4:9.03:144,9,0	1/1:0,6:6:18.06:288,18,0	1/1:0,18:18:48.16:767,48,0	0/0:14,0:14:42.14:0,42,587	1/1:2,14:16:3.17:600,3,0	1/1:4,23:27:60.20:959,60,0	1/1:0,11:11:21.07:336,21,0
chr10	41530942	.	A	ATGTG	10050.43	PASS	AB=0.740;AC=43;AF=0.768;AN=56;BaseQRankSum=-1.514;DP=953;FS=9.506;HRun=0;HaplotypeScore=206.9820;InbreedingCoeff=0.3459;MQ=54.63;MQ0=10;MQRankSum=1.131;QD=11.88;ReadPosRankSum=1.841;VQSLOD=3.0850;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:17,0:50:19.10:44,0,19	0/0:15,0:15:21.05:0,21,308	0/0:55,0:29:16.86:0,17,251	0/1:44,0:28:37.69:38,0,40	1/1:7,1:28:17.65:107,18,0	1/1:7,18:27:39.79:929,40,0	1/1:11,22:37:50.07:1063,50,0	1/1:29,0:24:19.58:150,20,0	1/1:9,24:33:39.13:949,39,0	1/1:22,0:60:48.72:514,49,0	1/1:11,0:30:9.27:74,9,0	1/1:14,1:50:62.96:945,63,0	1/1:6,27:33:46.04:1101,46,0	1/1:13,1:53:11.88:245,12,0	0/0:6,0:27:2.84:0,3,14	0/1:8,0:38:30.86:90,0,31	1/1:12,22:34:6.82:992,7,0	1/1:19,0:19:4.60:81,5,0	1/1:28,0:28:30.43:339,30,0	0/1:27,0:27:1.19:74,0,1	1/1:51,0:49:17.26:193,17,0	0/1:4,24:28:50.88:959,0,51	1/1:7,2:24:12.53:208,13,0	1/1:12,0:31:11.99:172,12,0	1/1:6,0:24:6.02:105,6,0	1/1:25,1:39:53.20:627,53,0	1/1:5,0:23:2.74:52,3,0	0/0:10,0:10:2.78:0,3,32
chr10	41531281	.	AGT	A	4633.88	PASS	AB=0.953;AC=43;AF=0.768;AN=56;BaseQRankSum=-1.947;DP=737;FS=2.898;HRun=0;HaplotypeScore=246.6788;InbreedingCoeff=0.4407;MQ=46.89;MQ0=7;MQRankSum=-1.226;QD=7.07;ReadPosRankSum=-0.927;VQSLOD=3.8499;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:38,0:38:18.36:120,18,0	0/0:13,0:13:38.28:0,38,487	0/0:24,0:13:29.99:0,30,296	0/0:26,0:10:19.20:0,19,160	0/0:19,0:19:0:0,0,0	0/1:16,3:19:10.14:10,0,29	0/1:25,3:28:0.14:0,0,0	1/1:4,29:33:84.40:957,84,0	0/1:29,0:29:9.08:126,0,9	1/1:48,0:47:44.04:357,44,0	1/1:26,0:25:20.03:123,20,0	1/1:32,0:32:15.44:223,15,0	1/1:22,0:22:8.59:67,9,0	0/1:40,0:40:7.23:7,0,15	1/1:38,0:38:40.72:283,41,0	1/1:20,1:21:10.67:105,11,0	1/1:21,0:21:9.92:48,10,0	1/1:22,0:22:8.93:37,9,0	1/1:2,16:16:41.89:436,42,0	1/1:5,9:14:15.20:134,15,0	1/1:11,47:55:15.02:150,15,0	1/1:20,1:21:7.49:87,7,0	1/1:19,0:18:3.47:25,3,0	0/1:41,0:41:15.07:127,0,15	1/1:15,0:15:7.67:39,8,0	1/1:19,18:36:80.82:847,81,0	1/1:2,12:14:29.94:289,30,0	1/1:0,1:1:3.01:37,3,0
chr10	41531283	.	T	TGC	1670.45	PASS	AB=1.000;AC=30;AF=0.536;AN=56;BaseQRankSum=-1.351;DP=720;FS=7.262;HRun=0;HaplotypeScore=254.5463;InbreedingCoeff=0.6247;MQ=46.45;MQ0=9;MQRankSum=2.713;QD=3.83;ReadPosRankSum=3.298;VQSLOD=1.2112;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:38,0:38:0.90:70,1,0	0/0:13,0:13:34.74:0,35,482	0/0:22,0:11:28.60:0,29,366	0/0:25,0:9:21.03:0,21,228	0/0:19,0:19:0:0,0,0	1/1:18,0:18:8.33:129,8,0	0/0:28,0:28:0.47:0,0,1	0/0:30,0:30:41.43:0,41,288	1/1:28,0:28:17.16:188,17,0	1/1:46,0:46:28.13:370,28,0	1/1:24,0:23:7.06:74,7,0	1/1:31,0:31:18.45:149,18,0	0/0:4,17:22:5.03:0,5,14	1/1:14,27:42:2.51:89,3,0	1/1:38,0:38:8.06:104,8,0	1/1:20,0:20:10.56:73,11,0	0/1:21,0:21:6.11:11,0,6	1/1:20,0:19:21.27:188,21,0	0/0:18,0:15:4.25:0,4,109	0/0:13,0:13:12.51:0,13,68	0/0:57,0:54:9.31:0,9,79	1/1:20,0:20:10.82:97,11,0	1/1:18,0:17:3:25,3,0	1/1:42,1:42:7.72:215,8,0	1/1:15,0:15:8.80:71,9,0	0/0:36,0:35:40.42:0,40,335	0/1:14,0:14:4.83:5,0,67	0/0:1,0:1:2.88:0,3,15
chr10	41531285	.	TGCGCGCGCGC	T	179.09	PASS	AB=0.987;AC=10;AF=0.179;AN=56;BaseQRankSum=6.288;DP=704;FS=0.928;HRun=0;HaplotypeScore=304.8465;InbreedingCoeff=0.0253;MQ=45.29;MQ0=11;MQRankSum=-5.738;QD=0.77;ReadPosRankSum=-0.128;VQSLOD=1.7550;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:37,1:38:54.63:55,0,646	0/0:13,0:13:35.91:0,36,1134	0/1:22,0:11:4.11:4,0,209	0/1:23,0:8:2.17:2,0,96	0/0:19,0:19:0:0,0,0	0/0:19,0:19:30.10:0,30,1092	1/1:28,0:28:0.67:1,1,0	0/0:30,0:30:79.57:0,80,1682	0/0:28,0:28:49.03:0,49,1348	0/0:43,0:43:99:0,104,2520	0/0:22,0:21:24.10:0,24,485	0/0:34,0:33:35.68:0,36,1337	0/0:23,0:23:8.99:0,9,130	0/0:36,0:36:18.43:0,18,496	0/0:36,0:36:5.02:0,5,941	0/0:19,0:19:23.84:0,24,538	0/0:20,0:20:15.52:0,16,340	0/1:20,0:19:16.92:17,0,1152	0/0:19,0:15:39.13:0,39,737	0/1:12,0:12:63.75:64,0,134	0/1:54,2:52:66.81:67,0,175	0/0:19,0:19:21.02:0,21,573	0/1:18,0:17:0:0,0,0	0/0:39,1:40:44.11:0,44,1642	0/0:15,0:16:11.20:0,11,402	0/0:34,0:33:46.58:0,47,1229	0/1:14,0:14:86.88:87,0,201	0/0:1,0:1:3.01:0,3,55
chr10	41531290	.	G	GCGCA	1768.46	PASS	AB=0.954;AC=24;AF=0.429;AN=56;BaseQRankSum=-2.953;DP=655;FS=9.592;HRun=0;HaplotypeScore=251.0618;InbreedingCoeff=0.0455;MQ=42.41;MQ0=11;MQRankSum=2.654;QD=4.13;ReadPosRankSum=3.664;VQSLOD=0.9264;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:35,0:36:0.04:133,0,0	0/0:10,0:10:22.48:0,22,329	0/0:14,0:4:5.89:0,6,64	0/0:20,0:4:6.41:0,6,41	0/1:1,17:21:0:0,0,0	0/1:20,0:20:28.15:152,0,28	0/0:30,0:30:0.18:0,0,1	0/0:29,0:29:65.34:0,65,461	0/1:24,0:24:41.40:129,0,41	1/1:37,0:37:26.47:371,26,0	1/1:18,0:17:6.44:83,6,0	0/1:26,0:25:50.25:136,0,50	0/1:22,0:22:3:3,0,29	1/1:34,0:34:14.14:122,14,0	0/1:33,0:32:40.92:65,0,41	0/1:17,0:17:21.32:70,0,21	0/1:19,0:19:9.15:9,0,50	1/1:20,0:19:33.91:270,34,0	0/0:18,0:14:29.44:0,29,223	0/1:12,0:12:16.77:17,0,113	0/0:50,0:46:16.81:0,17,155	0/1:17,0:17:16.40:60,0,16	0/0:20,0:19:0.75:0,1,4	0/1:40,0:42:62.44:206,0,62	1/1:16,0:16:6.62:77,7,0	0/0:35,0:34:54.42:0,54,513	0/1:13,0:13:28.59:29,0,116	0/0:1,0:1:2.98:0,3,22
chr10	41531292	.	G	GCGCA	3417.02	PASS	AB=0.968;AC=31;AF=0.554;AN=56;BaseQRankSum=-6.260;DP=646;FS=8.482;HRun=0;HaplotypeScore=241.8096;InbreedingCoeff=0.2153;MQ=41.89;MQ0=11;MQRankSum=1.794;QD=6.95;ReadPosRankSum=1.092;VQSLOD=1.3148;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:36,0:36:8.01:251,8,0	0/0:9,0:9:22.48:0,22,328	0/0:13,0:3:6.02:0,6,94	0/0:18,0:3:6.36:0,6,40	0/1:21,0:21:0:0,0,0	0/1:19,0:19:22.44:439,0,22	1/1:10,21:31:2.25:52,2,0	0/0:28,0:28:57.63:0,58,277	1/1:24,0:24:16.13:608,16,0	0/1:37,0:37:32.48:231,0,32	0/1:17,0:16:1.64:51,0,2	1/1:28,0:27:18.50:335,18,0	1/1:23,0:23:7.89:71,8,0	1/1:33,0:34:11.59:65,12,0	0/1:28,0:27:23.86:24,0,77	1/1:17,0:17:19.69:244,20,0	0/1:10,11:22:17.76:59,0,18	1/1:20,0:19:18.45:221,18,0	0/1:18,0:14:2.32:2,0,85	0/1:11,0:11:11.81:12,0,98	0/0:50,0:46:15.76:0,16,129	0/1:16,0:16:8.56:192,0,9	1/1:9,10:20:2.03:6,2,0	1/1:41,0:40:9.81:444,10,0	0/1:15,0:15:0.88:80,0,1	0/0:35,0:34:45.20:0,45,367	0/1:13,0:13:29.57:30,0,76	0/0:1,0:1:2.90:0,3,16
chr10	41531322	.	G	GCC	32.62	PASS	AB=0.973;AC=7;AF=0.125;AN=56;BaseQRankSum=4.703;DP=521;FS=6.817;HRun=0;HaplotypeScore=185.9192;InbreedingCoeff=0.3580;MQ=41.79;MQ0=21;MQRankSum=-5.396;QD=0.68;ReadPosRankSum=1.047;VQSLOD=2.1892;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:29.67:0,30,463	0/0:10,0:10:28.81:0,29,309	0/0:14,0:6:12:0,12,151	0/0:18,0:2:6.02:0,6,96	0/0:26,0:26:23.84:0,24,313	0/0:22,0:22:41.91:0,42,602	0/0:26,0:26:0:0,0,0	0/1:3,0:3:1.67:2,0,4	0/0:18,0:17:33.55:0,34,449	0/0:18,0:18:39.83:0,40,481	0/0:15,0:14:8.74:0,9,74	0/0:26,0:25:36.08:0,36,480	0/0:19,0:19:22.91:0,23,238	0/0:28,0:28:29.48:0,29,360	0/0:14,0:13:20.26:0,20,130	0/0:20,0:20:25.55:0,26,288	0/0:20,0:20:21.48:0,21,226	0/1:21,2:22:47.78:48,0,282	0/0:5,0:2:5.22:0,5,33	1/1:8,0:8:3.87:37,4,0	0/0:24,0:20:2.80:0,3,22	0/0:15,0:15:21.04:0,21,275	0/0:22,0:20:21.06:0,21,285	0/0:39,4:42:62.10:0,62,870	0/0:17,0:17:6.16:0,6,41	0/0:12,0:11:13.22:0,13,51	0/1:10,0:10:6.90:48,0,7	1/1:4,0:3:1.23:4,1,0
chr10	41533000	.	AC	A	1001.26	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=0.100;DP=590;FS=1.406;HRun=6;HaplotypeScore=82.1265;InbreedingCoeff=0.9972;MQ=84.41;MQ0=0;MQRankSum=-3.513;QD=27.06;ReadPosRankSum=0.957;VQSLOD=4.1463;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:81.24:0,81,1049	0/0:8,0:8:24.08:0,24,316	0/0:21,0:21:48.14:0,48,597	0/0:17,0:16:29.46:0,29,349	0/0:24,0:24:69.21:0,69,893	0/0:26,0:26:69.22:0,69,907	0/0:29,0:29:75.19:0,75,951	0/0:27,1:28:73.77:0,74,476	0/0:17,0:17:51.17:0,51,671	0/0:27,0:27:81.26:0,81,1052	0/0:15,0:15:39.12:0,39,499	0/0:15,0:15:45.15:0,45,591	0/0:21,0:21:57.19:0,57,749	0/0:17,0:17:51.17:0,51,670	0/0:22,0:22:60.18:0,60,775	0/0:16,0:16:45.15:0,45,592	1/1:2,35:37:99:1096,102,0	0/0:18,0:18:45.15:0,45,592	0/0:23,0:23:53.27:0,53,356	0/0:29,0:29:71.60:0,72,536	0/0:23,0:23:62.61:0,63,462	0/0:18,0:18:54.15:0,54,680	0/0:14,0:14:42.12:0,42,537	0/0:14,0:14:42.13:0,42,539	0/0:20,0:20:54.18:0,54,711	0/0:21,0:21:50.20:0,50,320	0/0:26,0:26:68.60:0,69,506	0/0:17,0:17:50.77:0,51,390
chr10	41533219	.	G	GA	7616.41	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-10.903;DP=642;FS=0.652;HRun=7;HaplotypeScore=124.9481;InbreedingCoeff=0.9999;MQ=86.02;MQ0=0;MQRankSum=-4.348;QD=29.29;ReadPosRankSum=2.575;VQSLOD=3.3571;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,28:34:87.22:1034,87,0	0/0:11,0:11:30.04:0,30,286	0/0:28,0:28:62.96:0,63,585	0/0:24,0:24:54.02:0,54,511	0/0:28,0:28:78.12:0,78,753	0/0:27,0:27:66.08:0,66,630	0/0:17,0:17:45.07:0,45,434	0/0:21,0:21:48.03:0,48,452	0/0:26,0:26:60.08:0,60,575	1/1:7,20:27:60.18:716,60,0	1/1:2,17:19:51.11:599,51,0	1/1:5,18:23:57.17:682,57,0	0/0:20,0:20:54.05:0,54,514	0/0:24,0:24:66.11:0,66,637	1/1:3,20:23:66.20:796,66,0	1/1:3,12:15:36.11:435,36,0	1/1:5,21:26:60.18:723,60,0	1/1:2,13:15:39.04:452,39,0	0/0:20,0:20:60.10:0,60,580	0/0:21,0:21:54.09:0,54,521	0/0:19,0:19:57.09:0,57,550	0/0:15,0:15:36.04:0,36,341	1/1:10,19:29:69.19:811,69,0	1/1:3,22:25:48.10:563,48,0	1/1:3,20:23:69.19:805,69,0	0/0:35,0:35:96.13:0,96,921	0/0:27,0:27:78.12:0,78,753	0/0:19,0:19:42.07:0,42,406
chr10	41533395	.	ATCTCTCTCTCTCTCTCTCTC	A	2064.45	PASS	AB=0.687;AC=8;AF=0.148;AN=54;BaseQRankSum=4.520;DP=548;FS=2.103;HRun=0;HaplotypeScore=274.0258;InbreedingCoeff=0.5319;MQ=71.85;MQ0=17;MQRankSum=-4.311;QD=26.47;ReadPosRankSum=-0.145;VQSLOD=1.8457;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:24.07:0,24,1237	0/0:4,0:4:3.01:0,3,189	./.	0/0:36,0:22:6.02:0,6,283	0/0:20,0:20:15.05:0,15,883	0/1:11,9:21:99:919,0,168	1/1:10,4:15:6.02:275,6,0	0/0:29,0:27:21.06:0,21,654	1/1:12,1:14:13.98:377,14,0	0/0:38,0:36:54.16:0,54,2963	0/0:16,0:14:21.07:0,21,1285	0/0:21,0:21:30.09:0,30,1794	1/1:6,0:11:12.04:398,12,0	0/0:22,0:22:39.13:0,39,2510	0/0:14,0:14:18.06:0,18,1210	0/0:7,0:7:6.02:0,6,440	0/0:18,0:20:21.07:0,21,636	0/0:13,0:13:24.08:0,24,1326	0/0:29,0:28:15.05:0,15,498	0/0:23,0:22:21.04:0,21,681	0/0:20,0:19:26.76:0,27,1030	0/1:9,1:16:12.93:236,0,13	0/0:19,0:19:30.10:0,30,1560	0/0:27,0:28:36.09:0,36,1533	0/0:12,0:10:6.02:0,6,421	0/0:21,0:21:44.50:0,45,1609	0/0:10,0:12:18.05:0,18,714	0/0:12,0:11:6.02:0,6,173
chr10	41533441	.	CTG	C	2216.72	PASS	AB=1.000;AC=25;AF=0.446;AN=56;BaseQRankSum=-1.039;DP=491;FS=11.105;HRun=0;HaplotypeScore=135.1585;InbreedingCoeff=0.8247;MQ=46.61;MQ0=24;MQRankSum=6.680;QD=9.05;ReadPosRankSum=2.457;VQSLOD=2.6682;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:28:22.67:278,23,0	0/0:10,0:10:17.52:0,18,122	0/0:3,0:2:5.69:0,6,41	0/0:5,0:5:14.74:0,15,99	1/1:15,0:14:11.85:40,12,0	0/0:20,0:20:20.52:0,21,117	0/0:21,0:19:21.84:0,22,174	0/0:26,0:25:63.28:0,63,388	0/0:20,0:19:33.43:0,33,254	1/1:4,28:29:75.24:632,75,0	1/1:5,12:14:20.72:181,21,0	0/1:15,0:15:8.66:82,0,9	0/0:10,0:10:14.83:0,15,79	1/1:22,0:22:3.26:107,3,0	1/1:13,1:14:38.27:333,38,0	1/1:9,0:8:14.47:106,14,0	1/1:18,0:18:8.88:59,9,0	1/1:3,14:17:12.03:139,12,0	0/0:14,0:12:29.57:0,30,213	0/0:14,0:12:12.45:0,12,98	0/0:25,0:23:27.32:0,27,231	0/0:21,0:21:29.25:0,29,227	1/1:18,0:16:29.19:206,29,0	1/1:29,0:28:32:229,32,0	1/1:5,5:7:3.01:38,3,0	0/0:33,0:31:57.43:0,57,409	0/0:17,0:16:14.58:0,15,173	0/0:7,0:4:5.98:0,6,47
chr10	41533451	.	GTGTGTC	G	677.85	PASS	AB=1.000;AC=12;AF=0.214;AN=56;BaseQRankSum=-0.917;DP=516;FS=1.256;HRun=0;HaplotypeScore=174.7490;InbreedingCoeff=0.1234;MQ=48.80;MQ0=26;MQRankSum=1.971;QD=3.27;ReadPosRankSum=-2.092;VQSLOD=1.8814;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:27:19:0,19,89	0/0:9,0:9:18.06:0,18,532	0/0:13,0:4:8.96:0,9,184	0/0:9,0:9:17.71:0,18,554	1/1:16,0:15:21:193,21,0	0/0:20,0:20:34.95:0,35,580	0/0:24,0:22:37.19:0,37,822	0/1:36,0:35:91.52:92,0,586	0/0:22,0:21:43.03:0,43,1076	0/1:36,0:33:16.79:17,0,1021	0/0:18,0:15:22.60:0,23,261	0/0:16,0:16:11.95:0,12,75	0/0:11,0:11:25.60:0,26,433	0/1:22,0:22:36.62:249,0,37	0/1:14,0:14:13.90:14,0,427	0/1:8,0:7:25.63:31,0,26	1/1:4,13:17:9.03:202,9,0	0/1:16,0:16:22.20:22,0,93	0/0:17,0:15:18.87:0,19,396	0/1:16,0:14:1.58:2,0,254	0/0:21,0:20:27.05:0,27,365	0/0:23,0:23:38.97:0,39,1000	0/0:18,0:16:5.83:0,6,53	0/1:26,0:25:8.02:8,0,77	0/0:9,0:6:2.51:0,3,7	0/0:29,0:28:67:0,67,898	0/0:17,0:17:15.86:0,16,450	0/0:5,0:2:6.02:0,6,97
chr10	41533455	.	GTC	G	1436.81	PASS	AB=1.000;AC=22;AF=0.393;AN=56;BaseQRankSum=0.815;DP=519;FS=5.906;HRun=0;HaplotypeScore=145.7634;InbreedingCoeff=0.4879;MQ=49.46;MQ0=25;MQRankSum=2.633;QD=5.34;ReadPosRankSum=-2.310;VQSLOD=2.3615;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:27:22.51:0,23,108	0/0:9,0:9:18.06:0,18,269	0/0:15,0:5:11.97:0,12,138	0/0:12,0:12:23.55:0,24,357	1/1:10,5:14:21.01:201,21,0	0/0:19,0:19:38.17:0,38,354	0/0:25,0:23:41.69:0,42,490	1/1:40,0:39:44.76:376,45,0	0/0:22,0:21:45.52:0,46,603	0/1:36,0:33:18.91:19,0,123	0/1:17,0:14:18.87:32,0,19	0/0:14,0:14:17.66:0,18,154	0/0:11,0:11:26.65:0,27,253	1/1:16,7:23:53.29:535,53,0	0/1:15,0:15:19.54:20,0,49	0/1:7,0:6:12.44:12,0,15	1/1:16,0:16:8.99:77,9,0	0/1:16,0:16:9:32,0,9	0/1:17,0:15:0.59:39,0,1	1/1:16,0:14:2.79:61,3,0	0/0:20,0:19:4.05:0,4,16	0/0:23,0:23:37.92:0,38,507	0/0:18,0:16:18.72:0,19,105	0/0:29,0:28:29.84:0,30,181	1/1:9,0:6:2.74:13,3,0	1/1:24,0:24:12.28:89,12,0	1/1:18,0:18:14.27:121,14,0	0/0:5,0:2:1.24:0,1,3
chr10	41533459	.	GTC	G	596.03	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=1.105;DP=524;FS=2.508;HRun=0;HaplotypeScore=147.3593;InbreedingCoeff=0.7851;MQ=50.32;MQ0=22;MQRankSum=0.290;QD=14.90;ReadPosRankSum=-0.382;VQSLOD=3.2884;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:25:53.54:0,54,477	0/0:9,0:9:18.06:0,18,347	0/0:19,0:8:21.07:0,21,358	0/0:12,0:12:30.57:0,31,532	1/1:13,4:16:8.22:185,8,0	0/0:18,0:18:38.97:0,39,626	0/0:27,0:26:50.99:0,51,880	0/0:38,0:37:40.40:0,40,507	0/0:25,0:24:48.60:0,49,916	0/0:37,0:34:92.79:0,93,1437	0/0:18,0:15:26.84:0,27,344	0/0:14,0:14:32.72:0,33,337	0/0:11,0:11:27.01:0,27,467	1/1:19,4:23:51.06:524,51,0	0/0:14,0:14:39.13:0,39,631	0/0:9,0:8:17.70:0,18,196	0/0:18,0:18:3.80:0,4,40	0/0:16,0:16:15.03:0,15,185	0/0:16,0:14:25.30:0,25,264	0/0:16,0:14:24.01:0,24,291	0/0:18,0:17:23.87:0,24,320	0/0:23,0:23:38.97:0,39,707	0/0:17,0:15:41.49:0,41,375	0/0:29,0:28:50.76:0,51,598	0/0:10,0:7:5.93:0,6,79	0/0:24,0:24:32.44:0,32,637	0/0:17,0:17:31.28:0,31,313	0/0:3,0:2:6.02:0,6,92
chr10	41533514	.	C	CGTGT	4947.85	PASS	AB=0.711;AC=41;AF=0.788;AN=52;BaseQRankSum=-0.821;DP=562;FS=3.248;HRun=0;HaplotypeScore=154.7670;InbreedingCoeff=0.2562;MQ=55.74;MQ0=5;MQRankSum=-0.870;QD=10.53;ReadPosRankSum=-1.348;VQSLOD=4.4096;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:31:8.98:73,9,0	0/0:6,0:6:8.99:0,9,114	./.	./.	0/0:15,0:25:3.68:0,4,70	1/1:16,5:22:32.82:559,33,0	1/1:28,1:28:23.81:291,24,0	1/1:18,0:18:3.45:22,3,0	0/1:19,7:31:15.01:129,0,15	1/1:31,0:31:44.22:718,44,0	1/1:15,0:16:11.98:99,12,0	0/1:9,0:20:19.42:19,0,99	0/1:10,4:18:7.40:220,0,7	0/0:11,0:20:21.02:0,21,196	1/1:18,2:20:15.02:259,15,0	1/1:5,1:11:6.02:123,6,0	1/1:19,0:20:24.20:228,24,0	1/1:10,3:13:18.14:256,18,0	1/1:10,1:15:14.92:171,15,0	1/1:12,0:12:3.01:49,3,0	1/1:19,0:17:2.97:21,3,0	1/1:6,9:20:17.54:346,18,0	0/1:13,0:20:16.99:25,0,17	0/1:19,0:33:18.76:84,0,19	1/1:20,0:20:17.63:282,18,0	1/1:29,0:28:44.94:651,45,0	1/1:9,0:14:12.04:218,12,0	1/1:7,0:7:6.02:105,6,0
chr10	41535019	.	TTGTGTGTG	T	1296.38	PASS	AB=0.817;AC=12;AF=0.231;AN=52;BaseQRankSum=3.267;DP=528;FS=0.000;HRun=0;HaplotypeScore=161.4642;InbreedingCoeff=0.6344;MQ=65.00;MQ0=11;MQRankSum=-4.662;QD=9.97;ReadPosRankSum=0.579;VQSLOD=2.6787;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:33:33.11:0,33,896	0/0:9,0:12:12.04:0,12,320	./.	./.	0/0:17,0:17:18.53:0,19,395	0/0:18,0:20:21.07:0,21,615	0/0:27,0:26:39.12:0,39,1154	0/0:31,0:30:22.88:0,23,446	0/0:7,0:12:12.04:0,12,347	1/1:22,4:26:15.38:340,15,0	1/1:13,3:16:9.03:221,9,0	0/1:15,0:18:53.93:54,0,151	0/0:4,0:11:12.04:0,12,324	0/0:15,0:15:11.58:0,12,318	1/1:12,5:17:20.96:426,21,0	0/0:21,0:23:36.12:0,36,1145	0/0:14,0:14:9.03:0,9,149	1/1:10,3:13:11.61:249,12,0	0/0:12,0:11:15.52:0,16,307	0/0:20,0:22:21.07:0,21,636	0/0:12,0:11:6.02:0,6,160	0/0:18,0:19:27.09:0,27,820	0/0:16,1:17:4.08:0,4,235	0/1:16,0:21:20.89:21,0,283	1/1:16,2:18:6.02:150,6,0	0/0:17,0:17:30.10:0,30,747	0/0:17,0:16:27.09:0,27,799	0/0:4,0:5:6.02:0,6,181
chr10	41535080	.	GTCTATA	G	13826.58	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=9.720;DP=445;FS=1.942;HRun=0;HaplotypeScore=138.1881;InbreedingCoeff=0.9721;MQ=77.74;MQ0=1;MQRankSum=-13.286;QD=45.78;ReadPosRankSum=-2.372;VQSLOD=4.5005;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,20:23:42.14:949,42,0	0/0:7,0:7:18.06:0,18,533	0/0:22,0:19:45.15:0,45,1256	0/0:28,0:24:59.98:0,60,1688	1/1:0,13:13:32.79:732,33,0	0/0:14,0:14:42.14:0,42,1315	0/0:31,0:31:81.26:0,81,2505	1/1:5,27:32:78.09:1517,78,0	0/0:7,0:7:15.05:0,15,519	1/1:6,9:15:30.05:570,30,0	1/1:5,12:18:30.06:622,30,0	1/1:2,13:15:36.12:782,36,0	0/0:15,0:15:33.11:0,33,1067	1/1:2,11:13:33.11:746,33,0	1/1:2,13:15:33.11:715,33,0	1/1:3,7:10:21.07:475,21,0	1/1:3,8:11:15.05:309,15,0	1/1:3,9:12:21.07:481,21,0	1/1:1,9:11:30.10:638,30,0	1/1:1,14:15:33.11:746,33,0	1/1:1,10:11:21.03:397,21,0	0/0:16,0:16:48.16:0,48,1565	1/1:0,15:15:42.06:898,42,0	1/1:8,17:25:17.98:402,18,0	1/1:0,18:18:45.15:1018,45,0	1/1:0,13:13:39.13:879,39,0	1/1:1,14:15:35.64:813,36,0	1/1:0,2:2:6.02:136,6,0
chr10	41535153	.	CTATAGTGATTT	C	1688.93	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.003;DP=531;FS=6.257;HRun=0;HaplotypeScore=186.2351;InbreedingCoeff=0.9912;MQ=88.83;MQ0=0;MQRankSum=-5.606;QD=60.32;ReadPosRankSum=-0.044;VQSLOD=2.5159;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:36.12:0,36,2088	0/0:11,0:11:33.11:0,33,1874	0/0:22,0:22:66.23:0,66,3385	0/0:22,0:22:42.37:0,42,3183	1/1:0,12:13:18.06:542,18,0	0/0:24,0:24:72.25:0,72,3922	0/0:24,0:24:72.25:0,72,4180	0/0:41,0:41:99:0,120,6615	0/0:21,0:21:63.22:0,63,3533	0/0:15,0:15:42.58:0,43,2295	0/0:14,0:14:33.11:0,33,1899	0/0:24,0:24:66.23:0,66,3861	0/0:19,0:19:57.20:0,57,3309	1/1:0,15:15:36.12:1267,36,0	0/0:25,0:25:66.23:0,66,3891	0/0:20,0:20:57.20:0,57,3266	0/0:18,0:18:51.18:0,51,2978	0/0:18,0:18:48.16:0,48,2672	0/0:12,0:12:36.12:0,36,1988	0/0:18,0:18:54.18:0,54,3027	0/0:22,0:22:42.14:0,42,2426	0/0:8,0:8:24.08:0,24,1408	0/0:9,0:9:21.07:0,21,1133	0/0:29,0:29:78.27:0,78,4455	0/0:20,0:20:51.18:0,51,2939	0/0:18,0:18:54.15:0,54,3043	0/0:23,0:23:57.63:0,58,3008	0/0:8,0:8:24.08:0,24,1423
chr10	41536904	.	AT	A	9242.85	PASS	AB=0.552;AC=37;AF=0.661;AN=56;BaseQRankSum=10.706;DP=611;FS=0.353;HRun=10;HaplotypeScore=66.0033;InbreedingCoeff=0.8914;MQ=73.30;MQ0=0;MQRankSum=-1.901;QD=21.20;ReadPosRankSum=1.308;VQSLOD=5.7692;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,24:29:62.01:527,62,0	0/0:12,0:12:33.08:0,33,356	0/0:15,0:15:22.60:0,23,224	0/0:13,1:14:2.84:0,3,211	1/1:0,24:24:68.98:599,69,0	0/0:25,1:27:42.15:0,42,643	0/0:22,0:22:48.13:0,48,531	1/1:5,16:20:41.98:364,42,0	0/0:16,0:16:39.06:0,39,418	1/1:3,22:26:37.83:546,38,0	1/1:1,14:15:38.98:339,39,0	1/1:2,13:15:38.98:339,39,0	0/0:25,0:25:72.19:0,72,789	1/1:2,18:20:53.98:469,54,0	1/1:6,24:30:29.84:488,30,0	1/1:3,19:22:53.99:469,54,0	0/0:27,0:28:71.99:0,72,764	1/1:5,17:22:20.80:409,21,0	1/1:3,23:26:65.97:573,66,0	1/1:1,30:31:83.96:729,84,0	0/1:3,13:16:21.37:293,0,21	0/0:16,0:16:48.12:0,48,524	1/1:1,14:15:32.99:287,33,0	1/1:0,15:15:41.99:365,42,0	1/1:6,19:25:47.96:417,48,0	1/1:2,28:30:83.98:729,84,0	1/1:0,32:32:86.98:755,87,0	1/1:0,22:22:63.46:548,63,0
chr10	41537653	.	TACACACACACAC	T	1311.56	PASS	AB=0.958;AC=11;AF=0.196;AN=56;BaseQRankSum=6.513;DP=511;FS=12.803;HRun=0;HaplotypeScore=177.4932;InbreedingCoeff=0.5579;MQ=66.74;MQ0=7;MQRankSum=-5.047;QD=12.26;ReadPosRankSum=3.275;VQSLOD=1.4533;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:18:8.82:220,9,0	0/0:11,0:11:14.92:0,15,718	0/0:41,0:31:2.97:0,3,20	0/0:34,0:22:9.03:0,9,173	1/1:12,11:23:26.53:172,27,0	0/0:8,0:17:2.84:0,3,117	0/0:14,0:17:9.03:0,9,309	0/0:24,0:23:30.05:0,30,644	0/0:32,0:30:45.62:0,46,2341	0/0:18,0:17:30.10:0,30,1485	0/0:19,0:18:23.83:0,24,1010	0/1:12,0:14:53.10:53,0,104	0/0:8,0:8:8.75:0,9,217	1/1:4,11:15:26.70:590,27,0	0/0:14,0:14:23.93:0,24,934	1/1:12,0:13:12.27:354,12,0	0/1:13,0:13:49.91:82,0,50	0/0:11,0:10:18.06:0,18,804	0/0:12,0:20:42.10:0,42,1625	0/0:22,0:22:21.07:0,21,915	0/0:14,0:14:18.06:0,18,779	0/0:25,0:25:17.79:0,18,587	0/0:16,0:22:7.35:0,7,159	0/1:11,0:11:0.72:1,0,72	0/0:13,0:13:11.79:0,12,461	0/0:14,0:14:33.11:0,33,1385	0/0:16,0:15:23.83:0,24,894	0/0:9,0:9:12.04:0,12,439
chr10	41537682	.	ACACACACACACAC	A	797.68	PASS	AB=1.000;AC=6;AF=0.107;AN=56;BaseQRankSum=6.342;DP=515;FS=5.557;HRun=0;HaplotypeScore=174.8523;InbreedingCoeff=0.5412;MQ=41.68;MQ0=41;MQRankSum=-5.862;QD=13.52;ReadPosRankSum=-4.921;VQSLOD=0.8529;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:11,3:13:21.85:283,22,0	0/0:12,0:12:24.03:0,24,997	0/0:19,0:2:5.98:0,6,81	0/0:26,0:4:12.04:0,12,319	0/0:19,0:19:6.88:0,7,68	0/0:25,0:24:22.49:0,22,356	0/0:21,0:20:14.47:0,14,491	0/0:22,0:20:59.99:0,60,1443	0/0:31,0:28:52.30:0,52,2866	0/0:19,0:15:45.09:0,45,2127	0/0:17,0:15:26.53:0,27,1312	0/0:26,0:24:17.76:0,18,508	0/0:16,0:16:20.71:0,21,501	0/1:15,0:14:31.44:259,0,31	0/0:18,0:18:31.41:0,31,1313	1/1:11,5:15:12.31:369,12,0	0/1:14,0:13:19.19:19,0,222	0/0:10,0:7:21.07:0,21,1137	0/0:21,0:18:52.72:0,53,2258	0/0:22,0:19:28.29:0,28,1236	0/0:27,0:20:32.02:0,32,1223	0/0:23,0:21:20.38:0,20,841	0/0:15,0:14:21.06:0,21,385	0/0:11,0:9:18:0,18,259	0/0:15,0:14:17.39:0,17,678	0/0:17,0:15:39.13:0,39,1881	0/0:13,0:12:32.12:0,32,1314	0/0:11,0:9:15.05:0,15,596
chr10	41537688	.	ACACACAC	A	942.43	PASS	AB=0.881;AC=14;AF=0.259;AN=54;BaseQRankSum=7.808;DP=512;FS=7.185;HRun=0;HaplotypeScore=149.2722;InbreedingCoeff=0.6561;MQ=40.63;MQ0=43;MQRankSum=-7.090;QD=7.54;ReadPosRankSum=-5.536;VQSLOD=-0.6630;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:14:15.39:154,15,0	0/0:11,0:11:21.01:0,21,602	./.	0/0:24,0:1:3.01:0,3,40	1/1:16,0:15:0.94:2,1,0	0/0:26,0:25:21.95:0,22,274	0/0:24,0:23:11.85:0,12,273	0/0:23,0:21:62.67:0,63,849	0/0:34,0:30:53.01:0,53,1773	0/0:20,0:16:44.94:0,45,1280	0/0:15,0:14:23.14:0,23,724	0/1:20,5:23:19.28:354,0,19	0/0:16,0:16:14.88:0,15,281	1/1:15,0:14:15.05:186,15,0	0/0:16,0:16:22.66:0,23,690	1/1:16,0:15:3.03:157,3,0	0/1:12,0:12:28.69:29,0,109	0/0:10,0:7:21.03:0,21,612	0/0:21,0:18:48.94:0,49,1324	0/0:24,0:21:33.55:0,34,769	0/0:28,0:21:38.64:0,39,790	0/0:20,0:18:11.40:0,11,399	1/1:12,3:14:16.65:125,17,0	1/1:10,0:8:8.96:102,9,0	0/0:14,0:13:14.06:0,14,377	0/0:17,0:15:36.59:0,37,1103	0/0:12,0:11:29.22:0,29,717	0/0:11,0:9:15.02:0,15,324
chr10	41537697	.	A	AG	224.93	PASS	AB=0.914;AC=8;AF=0.148;AN=54;BaseQRankSum=4.209;DP=515;FS=4.221;HRun=0;HaplotypeScore=127.7309;InbreedingCoeff=0.4762;MQ=39.24;MQ0=49;MQRankSum=-3.905;QD=2.62;ReadPosRankSum=-0.918;VQSLOD=2.5544;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,3:16:12.67:128,13,0	0/0:10,0:10:23.96:0,24,295	0/0:28,0:1:3.01:0,3,41	./.	0/0:23,0:22:1.77:0,2,5	0/0:28,0:27:27.11:0,27,332	0/0:25,0:24:12.80:0,13,173	0/0:14,0:20:57.82:0,58,566	0/0:30,0:26:62.54:0,63,568	0/0:21,0:17:47.23:0,47,454	0/0:14,0:13:15.89:0,16,164	0/1:19,5:22:39.57:123,0,40	0/0:15,0:15:20.27:0,20,184	0/0:17,0:16:21.14:0,21,165	0/0:16,0:15:32.52:0,33,333	1/1:12,5:16:3.42:84,3,0	0/1:14,0:13:3.63:4,0,165	0/0:7,0:4:12.04:0,12,161	0/0:15,0:13:38.91:0,39,371	0/0:24,0:21:34.53:0,35,342	0/0:24,0:18:32.88:0,33,314	0/0:20,0:18:13.52:0,14,102	1/1:11,3:14:0.06:3,0,0	0/0:11,0:9:3.02:0,3,7	0/0:15,0:13:24.23:0,24,239	0/0:11,0:11:25.47:0,25,213	0/0:10,0:10:26.02:0,26,261	0/0:9,0:9:11.37:0,11,81
chr10	41537710	.	AGAGG	A	1229.98	PASS	AB=0.967;AC=27;AF=0.519;AN=52;BaseQRankSum=0.276;DP=528;FS=1.055;HRun=0;HaplotypeScore=136.5065;InbreedingCoeff=-0.1553;MQ=38.50;MQ0=50;MQRankSum=1.455;QD=3.10;ReadPosRankSum=0.237;VQSLOD=2.4144;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:15:8.36:44,8,0	0/0:9,0:9:12.80:0,13,87	1/1:28,0:1:2.04:6,2,0	./.	./.	0/1:27,1:26:44.95:45,0,206	0/0:27,0:26:31.61:0,32,311	0/1:22,0:20:54.87:90,0,55	0/1:34,0:30:89.64:170,0,90	0/1:20,0:17:25.68:26,0,167	0/0:13,0:12:8.37:0,8,60	1/1:22,0:21:9.52:58,10,0	0/1:14,0:14:14.20:14,0,20	0/1:19,0:18:47.14:47,0,95	0/1:18,0:17:19.78:20,0,202	1/1:18,0:17:16.58:105,17,0	0/1:13,0:12:28.17:28,0,127	0/0:6,0:3:8.85:0,9,56	1/1:18,0:16:11.44:190,11,0	0/1:21,0:17:80.49:80,0,87	0/1:30,0:23:71.95:209,0,72	0/1:10,12:21:17.33:21,0,17	0/0:13,0:13:0.92:0,1,5	1/1:11,0:8:2.99:23,3,0	0/0:17,0:15:18.13:0,18,184	0/1:15,0:13:50.45:50,0,87	0/1:14,0:13:58.11:103,0,58	1/1:13,0:9:1.23:60,1,0
chr10	41537714	.	GGAGA	G	313.24	PASS	AB=0.985;AC=9;AF=0.180;AN=50;BaseQRankSum=-0.874;DP=532;FS=9.996;HRun=0;HaplotypeScore=139.6758;InbreedingCoeff=0.2872;MQ=38.67;MQ0=47;MQRankSum=1.050;QD=2.39;ReadPosRankSum=0.210;VQSLOD=1.9224;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:15:0.47:0,0,1	0/0:9,0:9:8.39:0,8,93	./.	./.	0/0:20,0:19:0:0,0,0	0/0:29,0:27:14.23:0,14,234	0/0:27,0:27:13.84:0,14,251	0/0:23,0:21:8.94:0,9,89	1/1:29,1:26:23.92:298,24,0	0/0:20,0:17:15.05:0,15,232	0/0:13,0:13:3.01:0,3,47	0/0:24,0:23:5.91:0,6,21	1/1:6,7:13:2.67:47,3,0	0/0:17,0:16:3.43:0,3,51	0/0:20,0:19:9.61:0,10,153	0/0:19,0:18:2.65:0,3,7	0/0:11,0:11:4.07:0,4,119	./.	0/0:20,0:18:15.74:0,16,90	0/1:20,0:18:9.33:9,0,235	0/1:32,0:25:29.16:29,0,199	1/1:22,0:21:2.48:40,2,0	0/0:16,0:16:0:0,0,0	0/0:11,0:8:2.20:0,2,6	0/0:18,0:16:6.01:0,6,91	0/0:15,0:13:12.44:0,12,164	0/1:13,0:12:14.37:14,0,136	0/0:13,0:10:5.93:0,6,50
chr10	41539760	.	C	CTGTGTGTGTGTGTGTGTG	13397.63	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=2.097;DP=721;FS=27.943;HRun=0;HaplotypeScore=324.6667;InbreedingCoeff=0.7175;MQ=58.49;MQ0=11;MQRankSum=-9.374;QD=26.90;ReadPosRankSum=-3.163;VQSLOD=2.0249;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:35:10.90:315,11,0	0/0:11,0:11:15.02:0,15,417	0/0:47,0:29:2.97:0,3,21	0/0:32,0:20:12.03:0,12,336	1/1:23,0:30:3.48:36,3,0	0/0:21,0:21:30.10:0,30,1272	0/0:19,0:22:42.13:0,42,1526	1/1:42,0:41:69.21:2027,69,0	0/0:29,0:34:69.22:0,69,2884	1/1:36,0:34:45.88:1980,46,0	1/1:17,0:20:3.48:195,3,0	1/1:21,0:21:11.96:748,12,0	0/0:32,0:34:75.25:0,75,3040	1/1:16,0:20:9.50:256,10,0	1/1:22,4:24:8.27:756,8,0	1/1:11,0:14:12.04:334,12,0	1/1:17,0:21:6:84,6,0	1/1:10,0:10:12.04:753,12,0	1/1:20,0:19:12.04:557,12,0	1/1:22,0:18:3.01:44,3,0	1/1:18,0:17:3.01:45,3,0	0/0:20,0:22:33.65:0,34,1500	1/1:24,0:22:6.48:258,6,0	1/1:15,2:17:6.49:416,6,0	1/1:34,0:32:2.50:194,3,0	1/1:33,0:30:36.12:2052,36,0	1/1:33,5:40:29.59:2093,30,0	1/1:4,4:9:3.01:253,3,0
chr10	41542800	.	A	ACCCT	4848.52	PASS	AB=0.978;AC=36;AF=0.643;AN=56;BaseQRankSum=-0.106;DP=513;FS=0.000;HRun=0;HaplotypeScore=152.8098;InbreedingCoeff=0.3559;MQ=67.52;MQ0=13;MQRankSum=-3.100;QD=12.18;ReadPosRankSum=-2.407;VQSLOD=3.9216;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:20,0:20:21.95:22,0,244	0/0:8,0:8:12.94:0,13,126	0/0:25,0:19:43.10:0,43,396	0/0:30,0:19:47.21:0,47,475	1/1:17,0:14:27.25:249,27,0	0/1:24,0:24:37.80:38,0,240	0/1:23,0:24:17.94:18,0,187	1/1:24,0:21:59.72:488,60,0	0/0:22,0:22:59.89:0,60,716	1/1:5,20:26:68.37:955,68,0	1/1:14,1:15:14.96:180,15,0	1/1:17,0:17:20.91:226,21,0	0/0:16,0:16:44.80:0,45,443	1/1:18,0:17:37.10:323,37,0	1/1:21,0:25:44.46:421,44,0	0/1:18,0:18:98.26:98,0,157	0/1:17,0:18:90.20:90,0,166	1/1:13,0:14:35.79:370,36,0	1/1:16,0:16:16.30:247,16,0	0/1:12,0:11:1.30:64,0,1	1/1:7,0:6:8.94:68,9,0	0/0:14,0:13:33.03:0,33,432	1/1:2,0:19:2.33:19,2,0	1/1:13,0:15:23.53:200,24,0	1/1:22,1:24:40.94:391,41,0	0/1:20,0:20:14.40:228,0,14	0/1:15,0:15:15.61:126,0,16	1/1:4,0:2:4.79:26,5,0
chr10	41542803	.	CTCTCTCTCTCTCTCTCT	C	1927.06	PASS	AB=0.788;AC=8;AF=0.143;AN=56;BaseQRankSum=7.901;DP=529;FS=19.154;HRun=0;HaplotypeScore=239.3305;InbreedingCoeff=-0.0125;MQ=64.99;MQ0=15;MQRankSum=-7.733;QD=18.71;ReadPosRankSum=-0.289;VQSLOD=0.6794;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:22:45.15:0,45,1439	0/0:9,0:9:16.83:0,17,919	0/0:24,0:18:45.57:0,46,713	0/0:29,0:18:51.14:0,51,809	0/0:17,0:14:23.76:0,24,746	0/0:26,0:26:51.69:0,52,2230	0/0:26,0:25:37.42:0,37,934	0/0:23,0:20:45.04:0,45,323	0/0:26,0:26:68:0,68,3575	0/0:26,0:25:72:0,72,3851	0/1:17,0:17:5.44:5,0,270	0/0:16,0:16:18.06:0,18,529	0/0:22,0:22:62.77:0,63,3084	0/0:18,0:17:28.18:0,28,620	0/0:29,0:29:36.10:0,36,1079	0/0:18,0:17:42.60:0,43,2373	0/0:18,0:18:43.96:0,44,2008	0/0:13,0:13:32.13:0,32,1174	0/1:11,2:14:99:323,0,136	0/1:6,2:11:33.35:121,0,33	0/0:6,0:5:5.84:0,6,35	0/0:16,0:15:30.09:0,30,1509	1/1:19,0:17:0.47:2,0,0	0/0:17,0:16:17.43:0,17,649	0/0:24,0:23:38.39:0,38,971	0/1:15,7:20:99:936,0,422	0/1:8,6:15:50.22:556,0,50	0/1:3,0:2:14.01:106,0,14
chr10	41542845	.	G	GACACAC	2252.33	PASS	AB=0.590;AC=32;AF=0.571;AN=56;BaseQRankSum=6.429;DP=527;FS=30.350;HRun=0;HaplotypeScore=169.6768;InbreedingCoeff=0.6440;MQ=47.98;MQ0=40;MQRankSum=-5.840;QD=8.07;ReadPosRankSum=-1.449;VQSLOD=1.2458;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:17:15.04:158,15,0	0/0:12,0:12:15.95:0,16,319	0/0:33,0:3:2.76:0,3,47	0/0:46,0:9:2.63:0,3,69	0/0:21,1:18:0.04:0,0,0	0/0:20,0:20:27.56:0,28,572	0/0:24,0:23:23.33:0,23,332	1/1:27,0:27:20.38:137,20,0	0/0:23,0:23:45.23:0,45,672	1/1:15,0:16:11.55:83,12,0	0/0:8,0:17:1.77:0,2,3	1/1:4,13:20:3.01:34,3,0	0/0:18,0:18:33.12:0,33,704	1/1:11,1:10:3.01:62,3,0	0/0:9,0:18:6.50:0,6,70	1/1:24,0:23:27.52:460,28,0	0/1:4,0:17:9.12:9,0,59	1/1:4,0:9:1.63:15,2,0	1/1:16,0:16:16.49:167,16,0	1/1:19,0:19:7.04:49,7,0	1/1:5,0:6:2.85:54,3,0	0/0:15,0:15:18.04:0,18,328	1/1:17,0:15:15.03:429,15,0	0/1:7,10:19:0:0,0,0	1/1:16,0:16:7.62:80,8,0	1/1:13,0:22:30.26:370,30,0	1/1:14,0:15:20.02:282,20,0	1/1:4,0:4:7.48:46,7,0
chr10	41542867	.	A	ACAAACAC	1774.22	PASS	AB=0.898;AC=10;AF=0.179;AN=56;BaseQRankSum=1.310;DP=608;FS=6.907;HRun=0;HaplotypeScore=189.2272;InbreedingCoeff=0.0014;MQ=53.52;MQ0=42;MQRankSum=-2.653;QD=9.44;ReadPosRankSum=-1.408;VQSLOD=1.7787;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:22:38.79:0,39,375	0/0:13,0:13:26.85:0,27,634	0/0:52,0:16:10.90:0,11,617	0/0:51,0:12:14.27:0,14,218	0/1:30,0:24:13.79:14,0,244	0/0:22,0:22:47.73:0,48,1172	0/0:19,0:22:38.94:0,39,818	0/1:31,0:31:99:457,0,135	0/0:23,0:23:54.09:0,54,1202	0/0:14,0:14:32.85:0,33,561	0/0:13,0:13:14.98:0,15,196	0/0:19,0:19:10.06:0,10,242	0/0:22,0:22:52.92:0,53,1375	0/0:17,0:15:10.88:0,11,283	0/0:21,0:21:33.06:0,33,614	0/1:20,0:19:58.76:59,0,225	0/0:21,0:21:41.29:0,41,691	0/0:12,0:12:24.01:0,24,335	0/1:11,1:20:99:201,0,203	0/1:18,3:22:16.17:288,0,16	1/1:17,0:17:28.74:179,29,0	0/0:15,0:15:41.95:0,42,689	0/0:17,0:17:1.36:0,1,332	0/0:25,0:24:38.77:0,39,612	0/0:15,0:15:17.75:0,18,216	0/1:21,1:24:99:312,0,198	0/1:13,5:18:40.41:385,0,40	0/1:4,0:3:18.05:28,0,18
chr10	41542883	.	CG	C	2355.24	PASS	AB=0.548;AC=7;AF=0.125;AN=56;BaseQRankSum=8.173;DP=537;FS=0.477;HRun=1;HaplotypeScore=102.0068;InbreedingCoeff=0.8178;MQ=71.86;MQ0=9;MQRankSum=-3.251;QD=28.72;ReadPosRankSum=1.305;VQSLOD=3.4687;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,20:22:38.36:694,38,0	0/0:8,0:8:24.08:0,24,383	0/0:40,0:24:68.68:0,69,965	0/0:25,0:15:19.32:0,19,334	1/1:1,27:25:62.49:781,62,0	0/0:21,0:21:57.19:0,57,910	0/0:23,0:23:56.97:0,57,863	0/0:42,0:42:99:0,120,1748	0/0:18,0:18:51.17:0,51,810	0/0:14,0:14:42.13:0,42,648	0/0:12,0:12:27.08:0,27,407	0/0:18,0:18:27.04:0,27,395	0/0:17,0:17:51.17:0,51,789	1/1:1,12:14:42.03:518,42,0	0/0:17,0:17:41.98:0,42,644	0/1:2,14:17:47.66:511,0,48	0/0:25,0:25:51.12:0,51,778	0/0:15,0:15:36.12:0,36,572	0/0:17,0:16:48.06:0,48,657	0/0:14,0:14:30.08:0,30,435	0/0:26,0:26:66.18:0,66,965	0/0:14,0:14:42.14:0,42,663	0/0:13,0:12:36.12:0,36,564	0/0:31,0:29:53.05:0,53,819	0/0:12,0:12:30.10:0,30,478	0/0:16,0:16:44.81:0,45,611	0/0:13,0:13:38.08:0,38,489	0/0:4,0:3:9:0,9,117
chr10	41543091	.	CA	C	5117.86	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=4.986;DP=641;FS=0.738;HRun=2;HaplotypeScore=72.0690;InbreedingCoeff=0.9988;MQ=89.15;MQ0=0;MQRankSum=-5.021;QD=35.79;ReadPosRankSum=0.511;VQSLOD=5.3010;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:60,0:60:99:0,181,2668	0/0:9,0:9:27.09:0,27,405	0/0:21,0:21:57.07:0,57,765	0/0:29,0:29:87.24:0,87,1147	0/0:21,0:20:54.18:0,54,809	0/0:23,0:23:66.22:0,66,979	0/0:25,0:25:75.25:0,75,1119	1/1:0,22:22:66.20:842,66,0	0/0:28,0:28:81.27:0,81,1214	0/0:23,0:23:60.17:0,60,874	0/0:15,0:15:42.10:0,42,604	0/0:23,0:23:69.23:0,69,1034	0/0:21,0:21:60.20:0,60,898	0/0:22,0:22:63.19:0,63,906	0/0:25,0:25:75.24:0,75,1104	0/0:17,0:17:45.14:0,45,655	0/0:41,0:41:99:0,120,1799	0/0:11,0:11:33.11:0,33,489	1/1:1,23:24:69.22:896,69,0	1/1:0,25:25:63.20:818,63,0	1/1:1,14:15:42.14:545,42,0	0/0:22,0:22:63.21:0,63,935	0/0:14,0:14:39.13:0,39,583	0/0:25,0:25:75.22:0,75,1082	0/0:23,0:23:69.18:0,69,987	1/1:1,22:23:21.27:771,21,0	1/1:0,25:25:69.22:895,69,0	1/1:0,9:9:27.09:350,27,0
chr10	41547117	.	CGT	C	361.87	PASS	AB=0.907;AC=7;AF=0.135;AN=52;BaseQRankSum=-0.128;DP=616;FS=3.625;HRun=0;HaplotypeScore=102.7788;InbreedingCoeff=0.2405;MQ=53.55;MQ0=12;MQRankSum=0.762;QD=3.41;ReadPosRankSum=1.586;VQSLOD=2.0559;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:13.82:0,14,113	0/0:8,0:9:8.12:0,8,97	./.	./.	0/0:12,0:11:5.99:0,6,57	0/1:10,0:10:7.28:7,0,88	0/1:24,1:33:23.70:24,0,81	0/0:24,0:23:10.20:0,10,62	1/1:11,11:24:20.72:191,21,0	0/0:14,0:13:16.13:0,16,126	0/0:17,0:15:0:0,0,0	0/0:12,0:20:2.99:0,3,27	1/1:11,12:24:23.90:243,24,0	0/0:27,0:27:5.05:0,5,87	0/0:18,0:27:5.99:0,6,52	0/0:18,0:17:6:0,6,51	0/0:19,0:19:8.98:0,9,73	0/0:21,0:33:28.05:0,28,229	0/0:19,0:20:18.38:0,18,152	0/0:18,0:18:9:0,9,106	0/0:42,0:40:5.95:0,6,53	0/1:10,5:15:26.73:27,0,39	0/0:15,0:15:2.98:0,3,25	0/0:24,0:23:5.70:0,6,51	0/0:17,0:24:3:0,3,26	0/0:21,0:21:8.93:0,9,72	0/0:15,0:15:2.45:0,2,24	0/0:3,0:3:2.99:0,3,23
chr10	41547161	.	G	GGT	290.05	PASS	AB=1.000;AC=8;AF=0.143;AN=56;BaseQRankSum=2.704;DP=560;FS=3.264;HRun=0;HaplotypeScore=100.2705;InbreedingCoeff=0.4241;MQ=52.50;MQ0=20;MQRankSum=2.480;QD=3.19;ReadPosRankSum=-0.786;VQSLOD=2.2157;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:24:28.47:0,28,315	0/1:9,0:9:7.76:8,0,147	0/0:30,0:14:27.05:0,27,401	0/0:34,0:17:44.46:0,44,517	1/1:4,13:16:21.07:274,21,0	0/0:13,0:13:26.99:0,27,284	0/0:26,0:26:39.58:0,40,475	0/0:25,0:23:48.02:0,48,548	0/0:27,0:27:56.84:0,57,577	0/0:12,0:11:26.95:0,27,288	0/0:15,0:13:24.06:0,24,289	0/0:19,0:18:26.78:0,27,271	0/0:23,0:23:50.82:0,51,566	1/1:2,21:23:8.98:120,9,0	0/0:24,0:24:32.47:0,32,353	0/0:9,0:9:14.69:0,15,144	0/1:23,0:22:7.26:7,0,394	0/0:24,0:24:19.54:0,20,368	0/0:18,0:17:26.44:0,26,339	0/0:17,0:17:2.30:0,2,237	0/0:34,0:30:29.19:0,29,325	0/0:10,0:10:24.01:0,24,286	0/0:21,0:20:33.08:0,33,393	0/0:30,0:29:41.99:0,42,498	0/0:18,0:18:27.04:0,27,323	0/1:13,0:12:5.94:6,0,138	0/0:15,0:15:23.23:0,23,218	0/1:5,0:4:4.28:4,0,15
chr10	41547389	.	AC	A	15481.25	PASS	AB=1.000;AC=54;AF=0.964;AN=56;BaseQRankSum=3.193;DP=451;FS=44.727;HRun=1;HaplotypeScore=320.1668;InbreedingCoeff=-0.0505;MQ=63.96;MQ0=0;MQRankSum=-5.681;QD=34.33;ReadPosRankSum=1.505;VQSLOD=-0.6017;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,20:20:48.11:591,48,0	1/1:0,12:12:36.12:491,36,0	0/1:14,0:14:61.76:62,0,80	0/1:15,0:13:54.62:55,0,67	1/1:0,14:14:30.09:386,30,0	1/1:0,13:13:39.13:530,39,0	1/1:0,16:16:48.15:596,48,0	1/1:0,25:25:69.23:963,69,0	1/1:0,28:28:75.24:969,75,0	1/1:0,19:19:54.18:753,54,0	1/1:0,17:17:39.12:486,39,0	1/1:0,22:22:66.22:886,66,0	1/1:0,26:26:78.26:1048,78,0	1/1:0,17:17:48.15:628,48,0	1/1:0,22:22:66.21:873,66,0	1/1:0,21:21:60.20:809,60,0	1/1:0,15:15:42.14:553,42,0	1/1:0,7:7:21.07:293,21,0	1/1:0,9:9:27.09:377,27,0	1/1:2,16:18:54.17:686,54,0	1/1:0,11:11:18.06:225,18,0	1/1:0,16:16:48.15:613,48,0	1/1:0,12:12:30.09:381,30,0	1/1:0,4:4:3.01:42,3,0	1/1:0,13:13:33.11:433,33,0	1/1:0,21:20:60.20:835,60,0	1/1:0,23:23:66.21:877,66,0	1/1:0,1:1:3.01:42,3,0
chr10	41547398	.	CG	C	11487.54	PASS	AB=0.914;AC=54;AF=0.964;AN=56;BaseQRankSum=2.279;DP=457;FS=6.004;HRun=1;HaplotypeScore=311.9492;InbreedingCoeff=-0.0509;MQ=54.76;MQ0=0;MQRankSum=-4.745;QD=25.14;ReadPosRankSum=3.763;VQSLOD=3.7774;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,25:25:22.61:276,23,0	1/1:0,14:14:30.10:384,30,0	0/1:8,1:9:25.45:102,0,25	0/1:12,1:11:83.22:95,0,83	1/1:0,14:14:18.06:233,18,0	1/1:0,11:11:30.10:389,30,0	1/1:0,16:16:18.06:233,18,0	1/1:0,22:22:57.19:739,57,0	1/1:2,19:21:39.13:503,39,0	1/1:0,19:19:54.17:693,54,0	1/1:0,20:19:18.06:233,18,0	1/1:0,23:23:57.19:738,57,0	1/1:0,27:27:63.20:816,63,0	1/1:0,16:16:36.11:454,36,0	1/1:1,21:22:51.16:653,51,0	1/1:0,27:27:69.22:894,69,0	1/1:0,15:15:33.10:424,33,0	1/1:1,3:4:12:137,12,0	1/1:0,11:11:33.11:428,33,0	1/1:0,17:17:30.10:389,30,0	1/1:0,16:16:15.04:194,15,0	1/1:0,19:19:39.13:505,39,0	1/1:1,9:10:15.05:194,15,0	1/1:0,7:7:6.02:78,6,0	1/1:0,14:14:21.07:272,21,0	1/1:0,21:20:60.19:775,60,0	1/1:0,23:23:48.16:618,48,0	1/1:0,1:1:3.01:39,3,0
chr10	41547740	.	T	TACAG	13610.86	PASS	AB=1.000;AC=33;AF=0.589;AN=56;BaseQRankSum=8.319;DP=828;FS=10.268;HRun=0;HaplotypeScore=217.0702;InbreedingCoeff=0.6357;MQ=60.75;MQ0=1;MQRankSum=-13.915;QD=25.83;ReadPosRankSum=-3.043;VQSLOD=3.0111;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:44,0:44:76.33:197,0,76	0/0:17,0:17:48.16:0,48,798	0/0:34,0:29:26.20:0,26,450	0/0:37,0:26:35.77:0,36,438	0/1:22,0:22:29.46:96,0,29	0/0:29,0:29:69.13:0,69,989	0/0:27,0:27:66.14:0,66,967	1/1:37,0:37:54.04:716,54,0	0/0:36,0:36:99:0,99,1548	1/1:20,14:34:80:1586,80,0	1/1:13,16:29:51.15:1252,51,0	1/1:44,0:44:78.27:1468,78,0	0/0:41,0:41:81.22:0,81,1224	0/1:36,0:36:3.10:454,0,3	1/1:15,29:44:99:2385,108,0	0/1:32,0:32:55.48:312,0,55	0/0:37,0:37:81.16:0,81,1158	1/1:13,12:24:53.18:1114,53,0	1/1:11,0:10:15.04:253,15,0	1/1:13,0:13:3.01:57,3,0	1/1:38,1:37:21.07:415,21,0	0/0:41,0:41:90.74:0,91,1442	1/1:13,0:13:15.04:238,15,0	1/1:30,1:31:14.59:300,15,0	1/1:7,13:20:45.14:1045,45,0	1/1:23,0:23:57.13:990,57,0	1/1:22,0:21:36.12:682,36,0	0/1:8,0:8:6.70:51,0,7
chr10	41547756	.	G	GACAGAC	16083.44	PASS	AB=0.830;AC=28;AF=0.500;AN=56;BaseQRankSum=1.923;DP=921;FS=24.091;HRun=0;HaplotypeScore=250.3608;InbreedingCoeff=0.2807;MQ=54.57;MQ0=9;MQRankSum=-10.051;QD=27.54;ReadPosRankSum=2.652;VQSLOD=3.0903;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:42:41.36:418,0,41	0/0:18,0:18:54.18:0,54,1191	0/0:54,0:34:58.75:0,59,978	0/0:59,0:34:50.18:0,50,885	0/1:12,0:21:29.72:308,0,30	0/0:26,0:26:72.18:0,72,1433	0/0:31,0:31:84.13:0,84,1528	1/1:14,32:54:99:2091,114,0	0/0:37,0:38:99:0,114,2361	0/1:43,0:43:99:528,0,500	0/1:32,0:32:99:531,0,124	1/1:6,33:42:78.27:2750,78,0	0/0:37,0:38:99:0,102,1975	1/1:21,0:36:18.19:985,18,0	0/1:46,0:46:99:1091,0,194	0/1:20,0:33:99:726,0,125	0/0:35,0:35:43.17:0,43,1510	0/1:27,0:26:99:462,0,202	0/1:6,9:13:10.40:526,0,10	1/1:1,9:12:3.01:106,3,0	1/1:11,31:46:29.98:929,30,0	0/0:38,0:38:99:0,106,2198	1/1:1,14:17:12.04:378,12,0	1/1:4,25:30:14.38:459,14,0	0/1:24,0:24:58.29:473,0,58	1/1:2,23:27:53.82:1945,54,0	1/1:3,19:21:36.12:1275,36,0	0/1:1,6:7:3.93:101,0,4
chr10	41547769	.	ATG	A	1145.37	PASS	AB=0.988;AC=12;AF=0.214;AN=56;BaseQRankSum=8.400;DP=899;FS=21.559;HRun=0;HaplotypeScore=243.5149;InbreedingCoeff=-0.1087;MQ=53.07;MQ0=23;MQRankSum=-8.608;QD=3.86;ReadPosRankSum=-9.724;VQSLOD=-0.5683;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:40,0:40:25.07:454,0,25	0/0:18,0:18:54.18:0,54,1032	0/0:56,0:29:81.19:0,81,1475	0/0:61,0:36:95.83:0,96,1636	0/1:21,0:21:99:180,0,150	0/0:25,0:25:75.24:0,75,1401	0/0:35,0:35:96.80:0,97,1876	0/0:51,1:50:91.97:0,92,1679	0/0:38,0:38:99:0,114,2170	0/0:40,1:41:99:0,103,1871	0/0:30,0:29:21.31:0,21,711	0/1:35,0:34:99:118,0,713	0/0:38,0:38:99:0,108,2017	0/1:40,0:39:99:177,0,804	0/0:49,0:46:99:0,122,1792	0/1:32,0:30:99:179,0,662	0/0:32,0:30:52.78:0,53,1158	0/0:26,1:25:15.71:0,16,1038	0/0:14,0:11:30.10:0,30,453	1/1:6,0:6:2.92:17,3,0	0/1:47,0:44:61.52:62,0,331	0/0:36,0:37:99:0,105,2056	0/1:20,0:20:54.91:55,0,120	0/1:23,0:23:4.21:4,0,278	0/1:25,0:24:11.26:11,0,720	0/0:26,0:26:25.10:0,25,866	0/0:23,0:21:47.38:0,47,648	0/1:6,1:7:35.88:36,0,85
chr10	41547772	.	A	AAC	8403.61	PASS	AB=0.644;AC=17;AF=0.304;AN=56;BaseQRankSum=3.073;DP=923;FS=10.073;HRun=0;HaplotypeScore=225.4168;InbreedingCoeff=0.7250;MQ=54.60;MQ0=22;MQRankSum=-5.615;QD=24.15;ReadPosRankSum=0.552;VQSLOD=4.4172;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:23,15:39:1.35:397,0,1	0/0:17,0:18:38.92:0,39,441	0/0:58,0:30:26.63:0,27,515	0/0:63,0:41:55.25:0,55,651	1/1:8,12:20:17.85:279,18,0	0/0:22,0:22:48.12:0,48,567	0/0:33,1:34:77.98:0,78,960	0/0:52,0:50:94.97:0,95,1148	0/0:37,0:38:99:0,105,1245	1/1:12,29:42:97.06:1515,97,0	1/1:11,19:30:22.27:600,22,0	0/0:37,0:36:51.15:0,51,611	0/0:36,0:37:90.11:0,90,1085	1/1:15,27:41:58.01:1281,58,0	1/1:14,34:46:13.33:1217,13,0	1/1:11,22:31:60.19:953,60,0	1/1:5,30:33:26.13:929,26,0	0/1:12,17:28:23.52:614,0,24	0/0:14,0:12:24.04:0,24,279	0/0:7,0:7:2.97:0,3,20	0/0:48,0:46:47.26:0,47,440	0/0:38,0:38:93.73:0,94,1110	0/0:20,0:20:9.03:0,9,110	0/0:28,0:28:9.02:0,9,220	0/1:9,17:25:22.31:618,0,22	0/0:24,1:26:13.66:0,14,643	0/0:24,0:22:42.13:0,42,510	0/0:9,0:9:8.24:0,8,81
chr10	41548086	.	A	ATACACATAAACT	32261.67	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-1.169;DP=773;FS=42.774;HRun=0;HaplotypeScore=258.3599;InbreedingCoeff=0.9923;MQ=60.02;MQ0=0;MQRankSum=-16.903;QD=87.91;ReadPosRankSum=-6.301;VQSLOD=2.6412;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:9,15:26:51.18:1969,51,0	0/0:16,0:16:45.15:0,45,1517	0/0:14,0:14:36.08:0,36,951	0/0:24,0:24:45.15:0,45,1190	1/1:18,7:25:36.06:1459,36,0	0/0:27,0:26:75.22:0,75,2449	0/0:16,0:16:42.14:0,42,1399	1/1:31,15:57:99:4959,153,0	0/0:38,0:38:99:0,108,3542	0/0:45,0:45:99:0,126,4319	0/0:36,0:36:81.26:0,81,2829	1/1:7,16:23:48.14:2487,48,0	0/0:29,0:29:81.26:0,81,2722	1/1:14,8:22:30.10:1519,30,0	0/0:43,0:43:99:0,108,3887	1/1:5,15:20:42.11:1884,42,0	0/0:20,0:20:57.20:0,57,1992	0/0:32,0:32:84.29:0,84,2832	1/1:12,7:22:54.06:2126,54,0	1/1:8,24:34:72.14:3236,72,0	1/1:9,1:10:12.04:457,12,0	0/0:38,0:38:99:0,102,3594	1/1:19,8:28:51.55:1909,52,0	1/1:6,9:15:14.97:555,15,0	0/0:28,0:28:57.18:0,57,1917	1/1:20,13:33:32.09:3561,32,0	1/1:19,23:43:99:5105,110,0	1/1:4,5:9:18.06:1035,18,0
chr10	41548094	.	A	AAACT	7556.91	PASS	AB=0.971;AC=17;AF=0.304;AN=56;BaseQRankSum=16.595;DP=721;FS=21.847;HRun=0;HaplotypeScore=221.4612;InbreedingCoeff=0.0613;MQ=56.17;MQ0=0;MQRankSum=-14.296;QD=24.07;ReadPosRankSum=1.998;VQSLOD=2.9576;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:24:99:397,0,281	0/0:17,0:17:51.18:0,51,1055	0/0:16,0:16:45.11:0,45,840	0/0:22,0:22:54.19:0,54,1132	1/1:21,4:25:33.03:506,33,0	0/0:27,0:26:78.25:0,78,1577	0/0:19,0:19:51.18:0,51,1068	0/1:44,0:44:99:792,0,1727	0/0:41,0:41:99:0,111,2274	0/0:47,0:47:99:0,141,2879	0/0:33,0:33:81.26:0,81,1656	0/1:18,0:18:20.44:570,0,20	0/0:28,0:28:84.29:0,84,1759	0/1:20,0:20:32.63:516,0,33	0/0:44,0:44:99:0,108,2265	0/1:20,0:20:32.65:400,0,33	0/0:22,0:22:57.20:0,57,1192	0/0:32,0:32:84.76:0,85,1744	0/1:16,0:16:99:321,0,440	0/1:29,0:29:99:709,0,131	1/1:6,1:7:9.03:191,9,0	0/0:36,0:36:99:0,105,2163	0/1:21,5:26:14.59:696,0,15	0/1:13,0:13:30.68:170,0,31	0/0:23,0:23:57.18:0,57,1157	0/1:25,4:29:99:945,0,299	0/1:34,0:34:99:1002,0,458	1/1:9,0:9:18.06:341,18,0
chr10	41548096	.	A	ACT	1259.52	PASS	AB=0.988;AC=17;AF=0.304;AN=56;BaseQRankSum=17.280;DP=722;FS=12.226;HRun=0;HaplotypeScore=232.1777;InbreedingCoeff=0.0643;MQ=54.24;MQ0=0;MQRankSum=-14.722;QD=3.96;ReadPosRankSum=0.375;VQSLOD=1.5838;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:23:34.37:34,0,222	0/0:17,0:17:51.16:0,51,807	0/0:12,0:12:36.12:0,36,586	0/0:24,0:24:64.71:0,65,968	1/1:22,2:24:15.76:149,16,0	0/0:27,0:26:78.24:0,78,1234	0/0:19,0:19:54.18:0,54,876	0/1:44,0:44:99:357,0,1339	0/0:41,0:41:99:0,111,1780	0/0:46,0:46:99:0,138,2220	0/0:31,0:31:78.27:0,78,1272	0/1:18,0:18:22.93:23,0,27	0/0:28,0:28:84.29:0,84,1355	0/1:17,3:20:26.76:150,0,27	0/0:44,0:44:99:0,108,1762	0/1:21,0:21:13.84:14,0,33	0/0:24,0:24:57.19:0,57,921	0/0:32,0:32:87.19:0,87,1353	0/1:18,0:18:13.99:14,0,396	0/1:30,0:30:26.68:27,0,112	1/1:10,0:10:15.60:108,16,0	0/0:36,0:36:99:0,105,1711	0/1:25,0:25:26.55:239,0,27	0/1:13,0:13:12.67:40,0,13	0/0:23,0:23:54.18:0,54,881	0/1:29,0:29:99:172,0,241	0/1:34,0:34:37.21:37,0,415	1/1:8,1:9:9.45:72,9,0
chr10	41548150	.	TGCACACACACACACACAC	T	15781.89	PASS	AB=0.813;AC=28;AF=0.500;AN=56;BaseQRankSum=11.221;DP=669;FS=8.056;HRun=0;HaplotypeScore=343.4733;InbreedingCoeff=0.8097;MQ=49.88;MQ0=19;MQRankSum=-10.505;QD=52.61;ReadPosRankSum=2.664;VQSLOD=3.0507;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:15,4:19:12.04:635,12,0	0/0:13,0:13:33.07:0,33,1545	0/0:29,0:14:40.76:0,41,525	0/0:45,0:24:53.20:0,53,1124	1/1:4,23:26:24.08:1059,24,0	0/0:24,0:24:66.15:0,66,2860	0/0:32,0:32:81.21:0,81,3473	1/1:14,24:35:99:1270,103,0	0/0:29,0:29:68.74:0,69,2763	0/0:31,0:30:83.95:0,84,1027	0/1:19,0:19:58.13:58,0,186	0/1:6,9:15:99:1275,0,106	0/0:24,0:24:68.95:0,69,3406	1/1:1,21:22:21.07:1112,21,0	0/0:48,0:48:77.49:0,77,886	1/1:5,8:13:24.08:1274,24,0	0/0:29,0:29:60.87:0,61,3771	0/0:22,0:22:42.04:0,42,675	1/1:9,4:12:35.56:801,36,0	1/1:7,9:15:18.06:953,18,0	1/1:4,15:19:2.12:157,2,0	0/0:24,0:24:60.11:0,60,2321	1/1:1,23:24:21.07:1006,21,0	1/1:1,4:5:12.04:513,12,0	0/0:19,0:18:28.33:0,28,231	1/1:3,31:34:46.73:2943,47,0	1/1:15,10:25:59.62:1625,60,0	1/1:1,10:11:8.53:1101,9,0
chr10	41548151	.	GCACACACACACA	G	10289.61	PASS	AB=0.915;AC=35;AF=0.648;AN=54;BaseQRankSum=9.496;DP=670;FS=2.215;HRun=0;HaplotypeScore=304.1056;InbreedingCoeff=0.6621;MQ=49.80;MQ0=20;MQRankSum=-9.724;QD=24.56;ReadPosRankSum=4.644;VQSLOD=3.4177;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:19:10.65:331,11,0	0/0:8,0:13:24.08:0,24,806	./.	0/0:43,0:23:8.98:0,9,273	1/1:27,0:26:21.07:496,21,0	0/0:15,0:24:39.13:0,39,1406	0/0:19,0:32:54.13:0,54,1662	0/1:39,0:36:22.98:23,0,67	0/0:17,0:29:39.13:0,39,1268	1/1:16,14:30:42.09:1165,42,0	1/1:7,10:19:12.04:330,12,0	0/1:14,0:15:55.40:641,0,55	0/0:14,0:24:54.19:0,54,1773	1/1:22,0:22:21.07:584,21,0	1/1:20,26:47:12.16:1026,12,0	1/1:13,0:13:24.08:669,24,0	0/0:10,0:32:54.14:0,54,2400	0/1:16,4:21:75.59:95,0,76	1/1:13,0:12:12.04:335,12,0	1/1:16,0:15:18.06:501,18,0	1/1:19,0:19:2.99:83,3,0	0/0:17,0:24:33.11:0,33,1070	1/1:24,0:24:17.99:499,18,0	1/1:5,0:5:9.03:250,9,0	1/1:7,12:18:18.06:626,18,0	1/1:34,0:34:53.31:1384,53,0	1/1:25,0:25:23.58:688,24,0	1/1:11,0:11:2.18:564,2,0
chr10	41548484	.	TC	T	4377.82	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=9.905;DP=630;FS=0.775;HRun=2;HaplotypeScore=75.4252;InbreedingCoeff=0.9997;MQ=68.86;MQ0=0;MQRankSum=-0.601;QD=32.67;ReadPosRankSum=1.255;VQSLOD=4.8114;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,48:47:99:1500,117,0	0/0:11,0:11:30.10:0,30,450	0/0:28,0:27:43.10:0,43,1032	0/0:31,0:28:31.82:0,32,1060	1/1:0,18:18:48.03:581,48,0	0/0:20,0:20:60.19:0,60,879	0/0:24,0:24:72.24:0,72,1079	0/0:32,0:32:93.31:0,93,1376	0/0:31,0:31:90.26:0,90,1322	0/0:14,0:14:42.14:0,42,628	0/0:16,0:16:36.12:0,36,536	0/0:15,0:15:45.15:0,45,671	0/0:24,0:24:72.23:0,72,1059	1/1:0,21:21:54.13:681,54,0	0/0:18,0:18:54.17:0,54,789	1/1:1,21:22:57.19:740,57,0	1/1:0,25:25:69.16:877,69,0	0/0:30,0:30:90.23:0,90,1294	0/0:23,0:23:66.19:0,66,947	0/0:22,0:22:59.14:0,59,866	0/0:31,0:31:93.28:0,93,1351	0/0:16,0:16:48.16:0,48,719	0/0:16,0:16:42.14:0,42,628	0/0:28,0:28:81.27:0,81,1212	0/0:20,0:20:60.20:0,60,891	0/0:18,0:18:54.18:0,54,788	0/0:16,0:16:48.15:0,48,696	0/0:12,0:12:35.90:0,36,455
chr10	41548937	.	CA	C	1596.49	PASS	AB=0.828;AC=11;AF=0.196;AN=56;BaseQRankSum=13.124;DP=784;FS=8.217;HRun=1;HaplotypeScore=137.1623;InbreedingCoeff=-0.2329;MQ=81.32;MQ0=0;MQRankSum=-11.020;QD=4.23;ReadPosRankSum=0.424;VQSLOD=-0.0984;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:29,14:43:99:314,0,936	0/0:11,0:11:33.10:0,33,504	0/0:29,0:29:85.25:0,85,1256	0/0:28,0:28:77.15:0,77,1119	0/0:31,0:31:90.31:0,90,1438	0/0:26,0:26:78.25:0,78,1223	0/0:35,0:35:99:0,105,1655	0/1:31,9:40:99:246,0,1315	0/0:21,0:21:60.15:0,60,908	0/0:27,0:27:81.26:0,81,1252	0/0:20,0:20:58.44:0,58,911	0/1:29,11:40:99:285,0,1164	0/0:26,0:26:75.26:0,75,1194	0/0:23,0:23:69.24:0,69,1103	0/0:30,0:30:90.28:0,90,1392	0/1:28,6:34:99:115,0,1228	0/0:26,0:26:78.24:0,78,1217	0/0:30,0:30:87.25:0,87,1363	0/1:32,5:37:99:103,0,1374	0/1:30,5:35:81.14:81,0,1097	0/1:26,3:29:1.51:2,0,1045	0/0:20,0:20:57.19:0,57,911	0/1:18,5:23:99:134,0,658	0/1:23,6:29:8.67:9,0,801	0/0:21,0:21:63.21:0,63,1006	0/1:31,6:37:99:114,0,1322	0/1:19,11:30:99:338,0,681	0/0:3,0:3:9.03:0,9,143
chr10	41548941	.	A	ATC	2534.47	PASS	AB=0.843;AC=11;AF=0.196;AN=56;BaseQRankSum=13.685;DP=788;FS=7.529;HRun=0;HaplotypeScore=156.2138;InbreedingCoeff=-0.2450;MQ=82.65;MQ0=0;MQRankSum=-11.089;QD=6.79;ReadPosRankSum=-0.471;VQSLOD=2.3803;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:31,13:44:99:495,0,944	0/0:11,0:11:33.11:0,33,538	0/0:28,0:29:79.13:0,79,1255	0/0:26,0:26:68.93:0,69,1036	0/0:33,0:33:93.28:0,93,1463	0/0:25,0:25:75.24:0,75,1199	0/0:36,0:36:99:0,105,1698	0/1:34,5:39:99:260,0,1302	0/0:21,0:21:63.22:0,63,1023	0/0:28,0:28:84.26:0,84,1284	0/0:21,0:21:57.64:0,58,882	0/1:28,11:39:99:479,0,1200	0/0:28,0:28:78.25:0,78,1247	0/0:25,0:25:72.23:0,72,1145	0/0:30,0:30:90.28:0,90,1415	0/1:30,6:36:99:222,0,1220	0/0:26,0:26:78.24:0,78,1245	0/0:29,0:29:87.22:0,87,1340	0/1:31,5:36:99:171,0,1326	0/1:30,5:35:99:167,0,1174	0/1:26,3:29:9.93:10,0,1140	0/0:22,0:22:60.19:0,60,950	0/1:21,2:23:99:151,0,673	0/1:20,6:26:43.80:44,0,819	0/0:22,0:22:63.22:0,63,1027	0/1:31,6:37:99:224,0,1314	0/1:18,11:29:99:460,0,765	0/0:3,0:3:9.03:0,9,146
chr10	41548948	.	TTA	T	869.65	PASS	AB=0.831;AC=7;AF=0.125;AN=56;BaseQRankSum=11.026;DP=761;FS=0.000;HRun=0;HaplotypeScore=147.7832;InbreedingCoeff=-0.1462;MQ=84.02;MQ0=0;MQRankSum=-10.371;QD=3.49;ReadPosRankSum=-1.418;VQSLOD=2.6563;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:31,11:42:99:124,0,1665	0/0:10,0:10:30.10:0,30,609	0/0:31,0:31:93.29:0,93,1762	0/0:24,0:24:72.23:0,72,1341	0/0:29,0:29:84.28:0,84,1666	0/0:25,0:25:75.26:0,75,1523	0/0:35,0:35:99:0,105,2078	0/0:30,1:31:45.14:0,45,1736	0/0:19,0:19:57.20:0,57,1135	0/0:28,0:27:84.29:0,84,1695	0/0:18,0:18:50.71:0,51,998	0/1:27,11:38:99:303,0,1513	0/0:28,0:28:84.29:0,84,1673	0/0:23,0:23:69.24:0,69,1393	0/0:30,0:30:90.29:0,90,1740	0/1:29,5:34:54.61:55,0,1583	0/0:27,0:27:81.28:0,81,1626	0/0:26,0:26:78.27:0,78,1534	0/1:30,4:34:45.57:46,0,1723	0/1:29,5:34:49.86:50,0,1325	0/0:28,2:30:81.17:0,81,1623	0/0:23,0:23:63.22:0,63,1262	0/0:19,2:21:15.27:0,15,938	0/0:22,5:27:51.03:0,51,1008	0/0:24,0:24:69.24:0,69,1355	0/1:32,6:38:99:166,0,1778	0/1:19,10:29:99:257,0,1026	0/0:3,0:3:9.03:0,9,183
chr10	41549322	.	C	CCGCAT	5675.13	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=2.919;DP=644;FS=3.625;HRun=0;HaplotypeScore=189.8704;InbreedingCoeff=0.9514;MQ=89.68;MQ0=0;MQRankSum=-12.250;QD=56.19;ReadPosRankSum=1.131;VQSLOD=5.2900;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,132,2610	0/0:16,0:16:45.15:0,45,907	0/0:20,0:20:48.16:0,48,963	0/0:34,0:34:74.66:0,75,1683	0/0:22,0:22:48.14:0,48,911	0/0:28,0:28:66.22:0,66,1306	0/0:20,0:20:54.19:0,54,1108	0/0:28,0:28:72.20:0,72,1386	0/0:24,0:24:63.22:0,63,1293	1/1:14,11:27:63.20:1675,63,0	1/1:6,1:8:3.01:91,3,0	0/0:24,0:24:69.21:0,69,1340	0/0:30,0:30:78.27:0,78,1599	0/0:21,0:21:57.18:0,57,1131	1/1:12,19:32:63.22:1908,63,0	0/0:24,0:24:66.23:0,66,1339	0/0:18,0:18:54.19:0,54,1105	1/1:8,11:19:39.13:1187,39,0	0/0:18,0:18:51.15:0,51,973	0/0:16,0:16:42.10:0,42,728	0/0:34,0:34:84.24:0,84,1564	0/0:32,0:32:84.26:0,84,1620	0/0:8,0:8:18.05:0,18,333	0/0:20,0:20:57.17:0,57,1128	1/1:7,8:15:27.09:815,27,0	0/0:29,0:29:16.02:0,16,1401	0/0:23,0:23:69.20:0,69,1343	0/0:6,0:6:18.06:0,18,367
chr10	41549747	.	T	TA	14964.59	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-1.398;DP=637;FS=10.629;HRun=0;HaplotypeScore=88.0225;InbreedingCoeff=0.9977;MQ=90.38;MQ0=0;MQRankSum=-8.154;QD=44.01;ReadPosRankSum=0.521;VQSLOD=4.2680;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,129,1779	0/0:9,0:9:27.09:0,27,377	0/0:31,0:31:87.27:0,87,1187	0/0:21,0:21:57.10:0,57,687	0/0:28,0:28:84.28:0,84,1174	0/0:24,0:24:69.18:0,69,942	0/0:17,0:17:51.17:0,51,713	1/1:0,35:35:99:1619,105,0	0/0:23,0:23:69.15:0,69,923	1/1:1,29:30:87.28:1365,87,0	1/1:0,21:21:57.19:909,57,0	1/1:1,21:22:51.17:815,51,0	0/0:17,0:17:51.17:0,51,707	0/0:24,0:24:72.23:0,72,988	1/1:0,18:18:54.18:863,54,0	0/0:19,0:19:57.19:0,57,796	0/0:17,0:17:48.15:0,48,653	1/1:0,21:21:54.18:863,54,0	1/1:0,23:23:69.22:1079,69,0	1/1:0,29:29:81.28:1284,81,0	1/1:0,22:22:60.20:958,60,0	0/0:22,0:22:66.22:0,66,923	1/1:0,22:22:63.13:974,63,0	1/1:2,23:25:62.04:1004,62,0	1/1:0,25:25:72.25:1148,72,0	1/1:0,16:16:48.14:743,48,0	1/1:0,26:26:69.24:1102,69,0	1/1:0,5:5:15.05:240,15,0
chr10	41550051	.	AG	A	10265.63	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=18.014;DP=622;FS=0.949;HRun=2;HaplotypeScore=112.1810;InbreedingCoeff=0.9984;MQ=80.10;MQ0=0;MQRankSum=-16.833;QD=33.33;ReadPosRankSum=-3.476;VQSLOD=3.5758;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,102,1517	0/0:14,0:14:42.14:0,42,629	0/0:15,0:15:45.15:0,45,644	0/0:27,0:27:78.18:0,78,1049	0/0:28,0:28:84.28:0,84,1258	0/0:32,0:32:96.31:0,96,1413	0/0:25,0:25:75.25:0,75,1124	1/1:9,27:36:90.25:1106,90,0	0/0:20,0:20:60.10:0,60,829	1/1:2,28:30:84.22:1048,84,0	1/1:1,20:21:54.03:633,54,0	1/1:1,11:12:32.92:337,33,0	0/0:28,0:28:84.28:0,84,1258	0/0:16,0:16:48.16:0,48,719	1/1:0,28:28:84.27:1088,84,0	0/0:26,0:26:78.26:0,78,1164	0/0:24,0:24:72.24:0,72,1077	1/1:1,7:8:24.08:310,24,0	1/1:3,16:19:51.16:648,51,0	1/1:4,17:21:57.09:664,57,0	1/1:2,15:17:36.04:433,36,0	0/0:25,0:25:75.25:0,75,1110	1/1:1,22:23:69.14:855,69,0	1/1:2,12:14:26.51:296,27,0	1/1:2,25:27:75.04:896,75,0	1/1:1,16:17:51.16:649,51,0	1/1:2,27:29:84.23:1069,84,0	1/1:0,6:6:18.06:233,18,0
chr10	41550064	.	T	TG	12511.85	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=17.513;DP=632;FS=10.249;HRun=1;HaplotypeScore=112.1445;InbreedingCoeff=0.9988;MQ=82.31;MQ0=0;MQRankSum=-15.553;QD=38.03;ReadPosRankSum=-2.786;VQSLOD=2.7734;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,105,1361	0/0:12,0:12:36.12:0,36,467	0/0:19,0:19:54.16:0,54,677	0/0:28,0:28:63.10:0,63,740	0/0:23,0:23:66.21:0,66,857	0/0:30,0:30:87.28:0,87,1129	0/0:21,0:21:63.17:0,63,779	1/1:4,31:35:90.29:1319,90,0	0/0:18,0:18:54.16:0,54,685	1/1:1,30:31:90.30:1327,90,0	1/1:1,20:21:54.18:805,54,0	1/1:1,16:17:39.13:583,39,0	0/0:29,0:29:81.26:0,81,1050	0/0:15,0:15:42.14:0,42,545	1/1:1,28:29:87.25:1276,87,0	0/0:25,0:25:75.24:0,75,974	0/0:22,0:22:63.20:0,63,818	1/1:3,6:9:21.07:314,21,0	1/1:3,14:17:48.10:663,48,0	1/1:2,19:21:48.16:718,48,0	1/1:5,19:24:54.18:804,54,0	0/0:26,0:26:78.24:0,78,997	1/1:1,23:24:51.17:761,51,0	1/1:0,16:16:35.45:488,35,0	1/1:0,25:25:69.19:1006,69,0	1/1:0,19:19:57.19:853,57,0	1/1:5,29:34:87.28:1279,87,0	1/1:0,7:7:21.07:314,21,0
chr10	41550922	.	CG	C	2310.28	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-7.589;DP=722;FS=6.109;HRun=3;HaplotypeScore=116.0723;InbreedingCoeff=0.9997;MQ=77.80;MQ0=0;MQRankSum=-0.493;QD=32.09;ReadPosRankSum=1.557;VQSLOD=2.9766;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:58:99:0,166,2335	0/0:16,0:16:42.14:0,42,604	0/0:20,0:20:54.09:0,54,753	0/0:11,0:11:28.56:0,29,308	0/0:25,0:25:66.21:0,66,928	0/0:26,0:26:75.25:0,75,1079	0/0:18,0:18:54.18:0,54,769	0/0:30,0:30:84.26:0,84,1153	1/1:1,21:22:57.18:706,57,0	0/0:28,0:28:81.27:0,81,1164	0/0:24,0:24:69.22:0,69,974	0/0:26,0:26:78.24:0,78,1087	1/1:1,25:26:72.23:892,72,0	0/0:26,0:26:69.23:0,69,992	0/0:27,0:27:78.25:0,78,1099	0/0:22,0:22:63.19:0,63,883	0/0:36,0:36:99:0,99,1420	0/0:32,0:32:93.29:0,93,1318	0/0:28,0:28:81.24:0,81,1099	0/0:26,0:26:78.25:0,78,1103	0/0:35,0:35:99:0,105,1511	1/1:0,24:24:69.22:855,69,0	0/0:21,0:21:60.20:0,60,863	0/0:28,0:28:84.28:0,84,1209	0/0:21,0:20:63.21:0,63,895	0/0:28,0:28:84.24:0,84,1168	0/0:26,0:25:78.26:0,78,1116	0/0:12,0:12:36.12:0,36,515
chr10	41551347	.	T	TATG	24264.43	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-8.364;DP=755;FS=2.042;HRun=0;HaplotypeScore=114.2061;InbreedingCoeff=0.9951;MQ=77.54;MQ0=0;MQRankSum=-7.462;QD=51.08;ReadPosRankSum=2.052;VQSLOD=6.7449;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,153,2398	0/0:18,0:18:54.18:0,54,849	0/0:16,0:16:37.01:0,37,558	0/0:23,0:23:41.46:0,41,650	1/1:5,26:33:57.20:1244,57,0	0/0:32,0:32:81.26:0,81,1260	0/0:37,0:37:99:0,102,1563	1/1:6,17:24:54.14:1096,54,0	0/0:31,0:31:87.30:0,87,1380	1/1:8,23:31:75.24:1579,75,0	1/1:2,14:18:39.13:851,39,0	1/1:2,21:23:57.20:1244,57,0	0/0:31,0:31:84.29:0,84,1332	1/1:1,28:28:81.28:1767,81,0	1/1:3,28:31:81.28:1768,81,0	0/0:16,0:16:45.15:0,45,713	1/1:3,26:30:75.26:1636,75,0	1/1:2,8:11:24.08:524,24,0	1/1:5,15:21:51.12:992,51,0	1/1:5,22:28:69.24:1483,69,0	1/1:4,41:45:99:2492,115,0	0/0:23,0:23:63.21:0,63,998	1/1:1,22:24:51.18:1102,51,0	1/1:5,36:42:93.17:2033,93,0	1/1:1,22:24:54.19:1179,54,0	1/1:3,22:25:69.24:1507,69,0	1/1:4,24:30:69.24:1506,69,0	1/1:2,4:6:12.04:262,12,0
chr10	41551523	.	TA	T	9952.77	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=20.697;DP=686;FS=5.523;HRun=4;HaplotypeScore=185.6989;InbreedingCoeff=0.9972;MQ=82.95;MQ0=0;MQRankSum=-13.584;QD=27.72;ReadPosRankSum=-0.676;VQSLOD=2.6897;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,160,2226	0/0:17,0:16:45.14:0,45,614	0/0:27,0:27:62.37:0,62,889	0/0:32,0:32:64.15:0,64,1079	1/1:1,16:17:27.08:323,27,0	0/0:27,0:27:81.27:0,81,1134	0/0:33,0:33:93.29:0,93,1284	1/1:0,23:23:42.13:504,42,0	0/0:26,0:26:78.25:0,78,1075	1/1:2,20:22:57.17:684,57,0	1/1:0,16:15:39.12:468,39,0	1/1:2,25:27:72.22:863,72,0	0/0:28,0:28:78.26:0,78,1092	1/1:2,25:27:72.22:863,72,0	1/1:3,25:28:72.22:863,72,0	0/0:29,0:29:81.27:0,81,1134	0/0:36,0:36:99:0,102,1409	1/1:0,18:18:54.17:647,54,0	1/1:0,11:11:27.08:324,27,0	1/1:0,21:21:54.16:647,54,0	1/1:1,18:19:27.08:323,27,0	0/0:18,0:18:51.16:0,51,697	1/1:3,16:18:33.10:395,33,0	1/1:0,24:24:38.80:467,39,0	1/1:1,31:32:81.25:971,81,0	1/1:1,23:24:57.17:683,57,0	1/1:3,21:25:63.15:749,63,0	1/1:0,6:6:15.05:180,15,0
chr10	41551702	.	A	AAC	6230.23	PASS	AB=0.583;AC=13;AF=0.232;AN=56;BaseQRankSum=-3.884;DP=955;FS=1.576;HRun=0;HaplotypeScore=243.8899;InbreedingCoeff=0.9395;MQ=58.51;MQ0=8;MQRankSum=-2.474;QD=31.63;ReadPosRankSum=1.751;VQSLOD=5.1475;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,38:44:99:1684,102,0	0/0:15,0:15:39.11:0,39,476	0/0:55,0:25:42.08:0,42,488	0/0:66,0:37:68.29:0,68,804	0/0:27,0:27:56.84:0,57,695	0/0:28,0:28:69.22:0,69,863	0/0:36,0:36:87.26:0,87,1073	0/0:51,0:50:99:0,111,1387	0/0:48,0:49:99:0,129,1573	1/1:13,16:26:48.16:782,48,0	1/1:10,10:20:33.11:513,33,0	0/0:37,0:37:93.29:0,93,1162	0/0:37,0:38:99:0,105,1276	0/0:40,0:40:84.18:0,84,1001	1/1:8,21:29:57.19:891,57,0	1/1:11,33:42:32.34:1422,32,0	0/0:34,0:34:81.26:0,81,1013	0/1:4,10:14:1.39:508,0,1	0/0:25,0:25:51.16:0,51,637	0/0:25,0:25:51.09:0,51,603	0/0:49,0:49:84.18:0,84,1015	0/0:32,0:32:75.24:0,75,938	0/0:28,0:28:60.19:0,60,749	0/0:44,0:44:91.35:0,91,1160	1/1:5,12:17:27.09:430,27,0	0/0:30,1:29:16.76:0,17,738	0/0:35,0:34:78.16:0,78,916	0/0:12,0:12:18.06:0,18,225
chr10	41551732	.	AACAC	A	6956.32	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=2.345;DP=919;FS=0.331;HRun=0;HaplotypeScore=243.6087;InbreedingCoeff=0.9988;MQ=52.87;MQ0=7;MQRankSum=-3.839;QD=32.06;ReadPosRankSum=0.281;VQSLOD=4.3664;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,132,3139	0/0:16,0:16:48.16:0,48,1188	0/0:50,0:26:63.19:0,63,1380	0/0:45,0:27:33.01:0,33,600	0/0:2,0:29:62.66:0,63,333	0/0:29,0:28:81.24:0,81,1932	0/0:36,0:36:93.32:0,93,2334	1/1:11,30:40:78.12:1130,78,0	0/0:47,0:47:99:0,135,3171	0/0:7,0:27:62.52:0,63,346	0/0:4,0:15:32.75:0,33,205	0/0:41,0:41:99:0,99,2358	0/0:43,0:44:99:0,120,2931	0/0:5,0:35:76.13:0,76,432	0/0:8,0:26:50.82:0,51,253	0/0:38,0:37:90.07:0,90,2122	0/0:26,0:26:72.23:0,72,1724	0/0:3,0:18:34.18:0,34,178	1/1:5,18:22:54.14:841,54,0	1/1:0,25:25:60.02:951,60,0	1/1:10,41:51:80.88:1157,81,0	0/0:33,0:33:87.26:0,87,2146	0/0:29,0:29:60.21:0,60,1399	0/0:47,0:47:99:0,108,2486	0/0:1,0:18:48.84:0,49,287	1/1:3,29:32:20.22:1272,20,0	1/1:5,27:32:72.13:1164,72,0	1/1:0,11:11:27.05:440,27,0
chr10	41551822	.	AATAGACAG	A	15209.65	PASS	AB=1.000;AC=35;AF=0.625;AN=56;BaseQRankSum=16.351;DP=666;FS=8.561;HRun=0;HaplotypeScore=220.3371;InbreedingCoeff=0.8493;MQ=60.87;MQ0=0;MQRankSum=-14.003;QD=41.90;ReadPosRankSum=-2.787;VQSLOD=2.9014;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,135,5460	0/0:13,0:13:39.11:0,39,1483	0/0:30,0:28:76.97:0,77,2065	0/0:24,0:23:32.96:0,33,1589	1/1:5,0:7:3.01:73,3,0	0/0:22,0:22:63.17:0,63,2299	0/0:36,0:36:99:0,108,3806	1/1:0,31:30:84.08:1431,84,0	0/0:35,0:35:99:0,105,4191	1/1:10,9:18:41.96:785,42,0	1/1:2,15:17:29.96:542,30,0	1/1:8,0:34:81.24:1858,81,0	0/0:36,0:36:99:0,105,3764	1/1:7,0:30:78.25:1790,78,0	1/1:1,19:21:45.15:1277,45,0	0/0:33,0:33:99:0,99,3675	0/1:31,0:31:57.03:57,0,874	1/1:4,6:11:27.09:728,27,0	1/1:12,11:21:57.10:1114,57,0	1/1:4,7:13:24.04:576,24,0	1/1:21,10:29:23.80:471,24,0	0/0:28,0:28:84.20:0,84,2947	1/1:3,0:5:3:25,3,0	1/1:14,0:29:29.08:607,29,0	1/1:3,13:18:54.17:1394,54,0	1/1:10,11:20:57.12:1344,57,0	1/1:3,15:18:36.12:1050,36,0	1/1:3,1:4:3.01:88,3,0
chr10	41551832	.	CAGACAG	C	8284.93	PASS	AB=0.977;AC=21;AF=0.389;AN=54;BaseQRankSum=16.935;DP=710;FS=14.618;HRun=0;HaplotypeScore=233.4113;InbreedingCoeff=0.1817;MQ=56.65;MQ0=1;MQRankSum=-15.162;QD=22.33;ReadPosRankSum=2.278;VQSLOD=3.2275;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,135,4406	0/0:16,0:16:48.16:0,48,1582	0/0:28,0:25:68.56:0,69,1646	0/0:22,0:21:44.98:0,45,1367	1/1:7,2:8:8.28:143,8,0	0/0:23,0:23:69.22:0,69,2160	0/0:36,0:36:92.57:0,93,3155	0/1:43,0:42:99:516,0,285	0/0:36,0:36:99:0,105,3537	0/1:18,0:17:33.34:309,0,33	0/1:21,0:21:99:183,0,154	1/1:8,25:34:75.25:1445,75,0	0/0:32,0:32:93.30:0,93,2972	1/1:8,22:30:78.26:1428,78,0	0/1:22,1:23:8.11:575,0,8	0/0:34,0:34:99:0,102,3112	0/0:31,0:31:55.46:0,55,966	0/1:13,1:14:62.73:362,0,63	0/1:23,0:20:52.43:462,0,52	0/1:16,1:17:41.91:270,0,42	0/1:35,0:32:80.11:203,0,80	0/0:29,0:29:87.30:0,87,2537	./.	1/1:13,16:29:24.45:445,24,0	0/1:19,2:21:6.61:646,0,7	0/1:28,0:27:4.91:706,0,5	1/1:21,0:20:28.02:560,28,0	0/1:5,0:5:32.21:32,0,36
chr10	41551834	.	G	GAC	644.11	PASS	AB=1.000;AC=4;AF=0.074;AN=54;BaseQRankSum=4.373;DP=722;FS=4.214;HRun=0;HaplotypeScore=223.4615;InbreedingCoeff=0.4891;MQ=56.61;MQ0=1;MQRankSum=0.034;QD=9.61;ReadPosRankSum=-2.466;VQSLOD=2.8247;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,129,1780	0/0:16,0:16:48.16:0,48,687	0/0:31,0:28:48.18:0,48,800	0/0:19,0:19:27.57:0,28,585	0/1:8,0:7:6.06:12,0,6	0/0:24,0:24:66.21:0,66,924	0/0:36,0:36:99:0,102,1376	0/0:43,0:42:65.77:0,66,502	0/0:37,0:37:99:0,105,1479	0/0:19,0:18:22.81:0,23,186	0/0:23,0:23:38.77:0,39,300	0/0:33,0:33:49.80:0,50,276	0/0:31,0:31:90.28:0,90,1250	0/0:32,0:32:47.37:0,47,248	0/0:24,0:24:47.84:0,48,383	0/0:34,0:34:99:0,99,1369	1/1:6,24:30:43.93:719,44,0	0/0:13,0:13:31.77:0,32,217	0/0:26,0:23:38.37:0,38,280	0/0:17,0:17:23.77:0,24,181	0/0:35,0:32:6.12:0,6,187	0/0:31,0:31:87.25:0,87,1184	./.	0/0:27,0:27:19.95:0,20,95	0/0:23,0:23:27.59:0,28,336	0/1:29,0:28:25.76:26,0,224	0/0:20,0:19:38.19:0,38,322	0/0:6,0:6:8.90:0,9,67
chr10	41551836	.	CAG	C	3766.87	PASS	AB=0.988;AC=22;AF=0.407;AN=54;BaseQRankSum=17.984;DP=730;FS=12.760;HRun=0;HaplotypeScore=208.1627;InbreedingCoeff=0.1396;MQ=55.13;MQ0=1;MQRankSum=-14.548;QD=9.05;ReadPosRankSum=1.809;VQSLOD=2.2760;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,135,2335	0/0:16,0:16:48.15:0,48,886	0/0:31,0:28:75.46:0,75,909	0/0:22,0:21:36.52:0,37,705	1/1:5,3:7:8.63:116,9,0	0/0:23,0:23:69.19:0,69,1164	0/0:37,0:37:95.46:0,95,1639	0/1:44,0:43:99:160,0,258	0/0:36,0:36:99:0,105,1880	0/1:20,0:19:34.62:98,0,35	0/1:24,0:24:65.54:66,0,166	1/1:26,6:33:72.18:764,72,0	0/0:32,0:32:93.25:0,93,1579	1/1:32,1:33:86.71:900,87,0	0/1:23,0:23:3.15:164,0,3	0/0:33,0:33:86.48:0,86,1505	0/1:28,0:28:11.03:59,0,11	0/1:13,0:13:34.85:126,0,35	0/1:28,0:25:70.91:171,0,71	0/1:17,1:18:40.60:92,0,41	0/1:37,1:35:92.97:93,0,95	0/0:31,0:31:93.23:0,93,1442	./.	1/1:20,8:28:23.64:230,24,0	0/1:23,0:23:13.08:218,0,13	0/1:27,2:28:6.98:288,0,7	1/1:18,2:19:24.10:219,24,0	0/1:6,0:6:4.49:4,0,33
chr10	41552178	.	A	AG	7139.90	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=18.993;DP=665;FS=0.946;HRun=1;HaplotypeScore=155.4613;InbreedingCoeff=0.9984;MQ=66.49;MQ0=2;MQRankSum=-7.674;QD=19.51;ReadPosRankSum=3.190;VQSLOD=5.1669;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,148,2052	0/0:16,0:16:48.16:0,48,670	0/0:37,0:35:91.51:0,92,1281	0/0:31,0:28:39.10:0,39,857	1/1:11,7:18:33.68:291,34,0	0/0:21,0:21:63.21:0,63,880	0/0:18,0:18:54.16:0,54,735	1/1:2,21:14:38.38:245,38,0	0/0:30,0:30:90.29:0,90,1241	1/1:19,11:29:67.08:739,67,0	1/1:15,4:19:39.50:333,39,0	1/1:17,11:27:60.81:548,61,0	0/0:35,0:35:99:0,105,1462	1/1:17,8:24:55.21:437,55,0	1/1:26,8:34:94.46:886,94,0	0/0:16,0:16:48.16:0,48,671	0/0:16,0:16:45.15:0,45,629	1/1:3,7:9:26.49:186,26,0	1/1:3,5:7:17.49:129,17,0	1/1:15,8:23:54.91:429,55,0	1/1:15,4:19:34.06:288,34,0	0/0:28,0:28:84.28:0,84,1173	1/1:10,6:16:35.09:333,35,0	1/1:14,8:21:43.67:372,44,0	1/1:19,11:29:71.08:456,71,0	1/1:12,13:25:66.99:613,67,0	1/1:15,8:23:61.50:506,61,0	1/1:9,4:13:38.68:349,39,0
chr10	41552181	.	CT	C	5708.20	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=18.266;DP=678;FS=0.600;HRun=1;HaplotypeScore=163.7961;InbreedingCoeff=0.9975;MQ=64.05;MQ0=2;MQRankSum=-9.477;QD=15.02;ReadPosRankSum=2.038;VQSLOD=4.8788;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,145,2273	0/0:19,0:19:57.17:0,57,862	0/0:36,0:34:97.91:0,98,1470	0/0:30,0:27:71.26:0,71,971	1/1:13,7:20:30.97:267,31,0	0/0:20,0:20:60.20:0,60,948	0/0:17,0:17:51.17:0,51,815	1/1:2,21:14:36.21:167,36,0	0/0:29,0:29:87.30:0,87,1390	1/1:20,11:30:47.30:607,47,0	1/1:16,4:20:29.73:253,30,0	1/1:16,12:27:59.38:407,59,0	0/0:36,0:36:99:0,108,1680	1/1:17,8:24:58.75:383,59,0	1/1:26,8:34:89.07:692,89,0	0/0:17,0:17:51.16:0,51,781	0/0:16,0:16:45.15:0,45,718	1/1:3,7:9:24.37:128,24,0	1/1:3,5:7:15.93:93,16,0	1/1:16,8:24:51.14:324,51,0	1/1:16,4:20:29.01:203,29,0	0/0:29,0:29:84.26:0,84,1296	1/1:12,6:18:37.65:295,38,0	1/1:17,8:24:48.07:363,48,0	1/1:19,11:30:62.74:327,63,0	1/1:12,14:26:63.13:498,63,0	1/1:15,8:23:30.73:348,31,0	1/1:11,4:15:43.40:353,43,0
chr10	41552396	.	C	CT	5290.87	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=0.526;DP=825;FS=12.518;HRun=5;HaplotypeScore=99.5064;InbreedingCoeff=0.9979;MQ=80.32;MQ0=1;MQRankSum=-1.252;QD=36.24;ReadPosRankSum=0.711;VQSLOD=3.0596;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:57:99:0,162,1699	0/0:11,0:11:27.07:0,27,290	0/0:31,0:31:84.13:0,84,873	0/0:27,0:27:56.23:0,56,649	0/0:29,0:29:72.12:0,72,752	0/0:21,0:21:63.14:0,63,669	0/0:35,0:35:93.20:0,93,983	0/0:23,0:23:63.16:0,63,677	0/0:21,0:21:57.14:0,57,612	1/1:3,36:38:99:1380,105,0	1/1:0,25:25:72.19:927,72,0	0/0:38,0:38:99:0,105,1111	0/0:33,0:33:99:0,99,1051	0/0:31,0:31:87.19:0,87,924	1/1:1,37:38:99:1382,105,0	0/0:28,0:27:81.20:0,81,870	0/0:21,0:21:54.13:0,54,580	1/1:0,17:17:48.16:632,48,0	0/0:24,0:22:57.13:0,57,605	0/0:37,0:36:87.22:0,87,933	0/0:38,0:38:99:0,99,1051	0/0:42,0:42:99:0,123,1321	0/0:25,0:25:69.17:0,69,741	0/0:33,0:33:87.16:0,87,914	1/1:1,26:27:75.24:971,75,0	0/0:38,0:38:99:0,105,1121	0/0:27,0:27:75.19:0,75,805	0/0:9,0:9:18.04:0,18,193
chr10	41552878	.	G	GT	12421.83	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=-0.273;DP=773;FS=6.627;HRun=6;HaplotypeScore=147.6348;InbreedingCoeff=0.9830;MQ=59.05;MQ0=10;MQRankSum=-1.577;QD=27.42;ReadPosRankSum=1.038;VQSLOD=2.9574;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:18:33.04:0,33,335	0/0:8,0:8:21.05:0,21,214	0/0:51,0:27:68.79:0,69,657	0/0:33,0:14:19.99:0,20,287	0/0:30,0:30:50.26:0,50,517	0/0:23,0:22:68.71:0,69,668	0/0:29,0:29:74.21:0,74,731	1/1:3,28:31:87.23:1054,87,0	0/0:30,0:30:23.62:0,24,383	1/1:18,19:37:93.23:1091,93,0	1/1:12,13:26:46.33:527,46,0	1/1:19,11:30:77.71:750,78,0	0/0:20,0:20:41.89:0,42,392	0/0:25,0:25:57.11:0,57,577	1/1:21,16:36:85.38:939,85,0	0/0:34,0:34:89.98:0,90,886	1/1:4,14:18:39.07:462,39,0	1/1:12,11:22:57.16:664,57,0	1/1:7,24:31:78.24:966,78,0	1/1:4,27:31:78.14:958,78,0	1/1:9,34:43:99:1244,100,0	0/0:18,0:18:19.91:0,20,221	1/1:17,13:30:60.14:635,60,0	1/1:8,20:27:46.41:549,46,0	1/1:13,9:22:45.02:502,45,0	1/1:7,21:28:75.19:915,75,0	1/1:6,30:36:87.28:1091,87,0	1/1:0,2:2:6.02:75,6,0
chr10	41552879	.	T	TG	2842	PASS	AB=0.988;AC=24;AF=0.429;AN=56;BaseQRankSum=7.924;DP=774;FS=4.248;HRun=1;HaplotypeScore=177.5906;InbreedingCoeff=0.3610;MQ=58.96;MQ0=10;MQRankSum=2.927;QD=6.27;ReadPosRankSum=7.842;VQSLOD=0.4929;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:43.84:0,44,526	0/0:8,0:8:21.07:0,21,287	0/0:51,0:27:74.69:0,75,941	0/0:34,0:14:20.03:0,20,380	0/0:30,0:30:68.11:0,68,821	0/0:24,0:23:69.23:0,69,948	0/0:29,0:29:77.78:0,78,1039	1/1:32,0:32:38.75:229,39,0	0/0:29,0:29:31.85:0,32,693	1/1:35,1:36:3.76:285,4,0	0/1:26,0:26:91.43:91,0,128	1/1:30,0:30:41.43:178,41,0	0/0:20,0:20:45.11:0,45,593	0/0:24,0:24:69.21:0,69,875	0/1:37,0:36:2.43:163,0,2	0/0:34,0:34:93.28:0,93,1250	0/1:18,0:18:41.98:108,0,42	1/1:23,0:22:28.21:161,28,0	0/1:31,0:31:49.11:256,0,49	1/1:29,2:31:0.80:298,1,0	0/1:41,1:42:21.70:374,0,22	0/0:18,0:18:26.62:0,27,424	1/1:29,0:29:37:181,37,0	0/1:28,0:27:27.48:105,0,27	0/1:22,1:23:61.37:78,0,61	0/1:28,1:29:16:202,0,16	1/1:36,0:36:9.52:301,10,0	1/1:2,0:2:5.42:23,5,0
chr10	41552884	.	TGAG	T	6007.92	PASS	AB=0.986;AC=27;AF=0.482;AN=56;BaseQRankSum=11.214;DP=752;FS=1.646;HRun=0;HaplotypeScore=185.8205;InbreedingCoeff=0.3134;MQ=57.57;MQ0=13;MQRankSum=0.851;QD=12.36;ReadPosRankSum=-1.784;VQSLOD=4.4355;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:22:83.72:84,0,349	0/0:8,0:8:24.08:0,24,517	0/0:48,0:24:68.28:0,68,1125	0/0:34,0:13:9.32:0,9,529	0/1:31,0:31:99:104,0,752	0/0:24,0:24:70.08:0,70,1317	0/0:28,0:29:78.07:0,78,1481	0/1:30,0:29:99:187,0,118	0/0:28,0:28:0.81:0,1,810	1/1:22,8:33:85.32:724,85,0	1/1:15,9:25:62.63:498,63,0	1/1:12,0:30:82.45:722,82,0	0/0:21,0:21:41.91:0,42,706	0/0:22,0:22:6.82:0,7,815	1/1:18,16:38:91.13:941,91,0	0/0:33,0:33:24.14:0,24,824	1/1:15,0:16:21.90:197,22,0	1/1:11,12:23:36.70:602,37,0	0/1:26,0:26:99:190,0,195	0/1:30,0:31:99:105,0,575	0/1:36,0:37:99:206,0,526	0/0:18,0:18:22.57:0,23,445	1/1:13,0:32:59.53:415,60,0	1/1:22,0:26:47.39:276,47,0	1/1:12,8:21:49.87:444,50,0	0/1:25,1:27:99:173,0,329	0/1:33,0:33:99:131,0,457	0/1:2,0:2:9.92:10,0,12
chr10	41552886	.	AGTGT	A	4252.65	PASS	AB=0.830;AC=24;AF=0.462;AN=52;BaseQRankSum=5.341;DP=753;FS=2.858;HRun=0;HaplotypeScore=206.1370;InbreedingCoeff=0.7638;MQ=57.28;MQ0=14;MQRankSum=-3.540;QD=12.05;ReadPosRankSum=-0.416;VQSLOD=4.4570;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:10,11:21:21.02:313,21,0	0/0:8,0:8:18.05:0,18,382	./.	./.	1/1:18,1:31:30:284,30,0	0/0:21,0:22:44.16:0,44,811	0/0:26,0:27:41.87:0,42,882	0/0:30,0:29:12.01:0,12,173	0/0:15,0:28:27.08:0,27,419	0/1:34,0:34:19.90:368,0,20	1/1:24,1:25:29.67:403,30,0	1/1:30,0:30:44.66:452,45,0	0/0:14,0:23:9.03:0,9,150	1/1:17,1:23:18.02:182,18,0	1/1:36,2:37:49.69:629,50,0	0/1:15,16:33:1.08:652,0,1	1/1:15,0:15:2.94:18,3,0	1/1:22,0:22:17.58:340,18,0	0/0:27,0:27:24.08:0,24,441	0/0:28,0:31:62.37:0,62,1078	0/0:37,0:38:47.17:0,47,1051	0/0:11,0:20:17.59:0,18,230	1/1:31,0:31:17.44:196,17,0	1/1:26,0:25:2.54:90,3,0	1/1:23,0:21:23.93:326,24,0	0/0:24,0:27:5.78:0,6,736	0/0:30,0:33:50.11:0,50,851	0/0:2,0:2:3.01:0,3,41
chr10	41553535	.	TGG	T	582.14	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.501;DP=637;FS=3.579;HRun=2;HaplotypeScore=113.3147;InbreedingCoeff=0.9941;MQ=88.62;MQ0=0;MQRankSum=-6.505;QD=29.11;ReadPosRankSum=1.763;VQSLOD=3.5632;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,166,3236	0/0:8,0:8:24.08:0,24,488	0/0:34,0:32:96.30:0,96,1867	0/0:27,0:27:78.25:0,78,1477	0/0:21,0:21:63.22:0,63,1241	0/0:21,0:21:63.22:0,63,1279	0/0:28,0:28:84.27:0,84,1645	0/0:36,0:36:99:0,108,2162	0/0:20,0:20:60.19:0,60,1183	0/0:34,0:34:99:0,102,2042	0/0:20,0:20:60.19:0,60,1168	0/0:19,0:19:57.20:0,57,1158	0/0:20,0:20:60.21:0,60,1208	0/0:18,0:18:54.19:0,54,1097	0/0:28,0:28:84.28:0,84,1654	0/0:24,0:24:72.21:0,72,1355	1/1:0,20:20:45.15:677,45,0	0/0:10,0:10:30.10:0,30,591	0/0:32,0:32:96.32:0,96,1916	0/0:26,0:26:78.27:0,78,1570	0/0:28,0:28:84.28:0,84,1644	0/0:11,0:11:33.11:0,33,670	0/0:9,0:9:27.09:0,27,549	0/0:12,0:12:36.11:0,36,694	0/0:20,0:20:57.20:0,57,1147	0/0:24,0:24:72.24:0,72,1429	0/0:24,0:24:72.22:0,72,1384	0/0:8,0:8:24.08:0,24,486
chr10	41553722	.	CT	C	7922.61	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=8.687;DP=550;FS=4.577;HRun=7;HaplotypeScore=63.8949;InbreedingCoeff=0.9882;MQ=73.56;MQ0=1;MQRankSum=0.742;QD=24.99;ReadPosRankSum=0.777;VQSLOD=5.3502;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:69.20:0,69,852	0/0:14,0:14:42.13:0,42,528	0/0:24,0:20:44.10:0,44,492	0/0:22,0:17:20.93:0,21,400	0/0:38,0:38:99:0,105,1294	0/0:20,0:20:60.19:0,60,753	0/0:8,0:8:24.08:0,24,300	1/1:2,27:29:81.14:810,81,0	0/0:11,0:11:30.08:0,30,362	1/1:1,30:31:90.19:912,90,0	1/1:3,18:21:54.12:548,54,0	1/1:3,9:12:21.05:214,21,0	0/0:10,0:10:24.08:0,24,300	0/0:9,0:9:24.08:0,24,302	1/1:1,15:16:33.07:337,33,0	0/0:14,0:14:42.13:0,42,528	0/0:32,0:32:78.25:0,78,980	1/1:3,17:20:23.16:392,23,0	1/1:5,22:25:33.68:570,34,0	1/1:3,26:29:75.12:754,75,0	1/1:0,8:8:21.05:214,21,0	0/0:7,0:7:12.04:0,12,151	1/1:1,21:22:53.63:549,54,0	1/1:0,9:9:24.05:245,24,0	1/1:1,25:26:57.13:582,57,0	1/1:4,25:29:75.14:756,75,0	1/1:1,32:33:90.20:918,90,0	1/1:0,5:5:12.03:122,12,0
chr10	41553987	.	AT	A	2026.26	PASS	AB=0.519;AC=3;AF=0.054;AN=56;BaseQRankSum=5.533;DP=714;FS=2.430;HRun=1;HaplotypeScore=87.8591;InbreedingCoeff=0.6728;MQ=63.51;MQ0=1;MQRankSum=0.441;QD=36.18;ReadPosRankSum=0.263;VQSLOD=3.7418;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,28:28:81.27:1126,81,0	0/0:7,0:7:21.07:0,21,336	0/0:38,0:35:99:0,105,1572	0/0:36,0:34:85.19:0,85,1476	0/0:25,0:25:69.20:0,69,1049	0/0:18,0:18:54.18:0,54,863	0/0:31,0:31:93.30:0,93,1464	0/0:26,0:26:78.25:0,78,1210	0/0:33,0:33:99:0,99,1517	0/0:22,0:22:66.17:0,66,1005	0/0:12,0:12:33.11:0,33,522	0/0:35,0:35:99:0,105,1622	0/0:35,0:35:99:0,105,1649	0/0:28,0:28:84.22:0,84,1244	0/0:23,0:23:69.24:0,69,1103	0/1:2,26:28:11.66:1007,0,12	0/0:25,0:25:60.20:0,60,955	0/0:34,0:34:99:0,102,1612	0/0:18,0:18:54.18:0,54,842	0/0:22,0:22:54.17:0,54,809	0/0:40,0:40:99:0,108,1689	0/0:7,0:7:21.07:0,21,336	0/0:14,0:14:42.14:0,42,656	0/0:33,0:33:99:0,99,1542	0/0:23,0:23:69.24:0,69,1103	0/0:31,0:31:93.31:0,93,1453	0/0:29,0:29:75.26:0,75,1199	0/0:13,0:13:39.11:0,39,598
chr10	41554048	.	ATTG	A	6502.70	PASS	AB=0.643;AC=13;AF=0.232;AN=56;BaseQRankSum=7.864;DP=736;FS=1.506;HRun=0;HaplotypeScore=140.5533;InbreedingCoeff=0.8996;MQ=58.78;MQ0=8;MQRankSum=-3.533;QD=36.33;ReadPosRankSum=-1.249;VQSLOD=5.4124;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,117,2438	0/0:12,0:12:33.11:0,33,728	0/0:32,0:20:51.14:0,51,1006	0/0:26,0:22:63.18:0,63,1263	0/0:39,0:39:99:0,114,2482	0/0:15,0:15:45.15:0,45,993	0/0:30,0:30:84.23:0,84,1652	1/1:4,31:33:81:1157,81,0	0/0:31,0:31:84.25:0,84,1748	0/0:29,0:29:84.29:0,84,1853	0/0:28,0:27:75.24:0,75,1582	0/0:25,0:25:75.24:0,75,1595	0/0:22,0:22:63.20:0,63,1329	0/0:29,0:29:81.28:0,81,1774	0/0:25,0:25:66.21:0,66,1388	0/0:24,0:24:69.24:0,69,1522	0/0:24,0:24:63.11:0,63,1293	0/0:21,0:21:48.08:0,48,991	1/1:3,15:18:45.11:671,45,0	1/1:0,27:27:77.92:1100,78,0	1/1:1,34:35:78.20:1220,78,0	0/0:19,0:19:51.16:0,51,1075	0/0:25,0:25:72.25:0,72,1541	0/0:34,0:34:96.31:0,96,2061	0/0:26,0:26:72.21:0,72,1466	1/1:2,30:32:26.95:1316,27,0	1/1:2,21:23:50.91:818,51,0	0/1:4,5:9:42.09:220,0,42
chr10	41554351	.	A	AT	2340.84	PASS	AB=0.548;AC=3;AF=0.054;AN=56;BaseQRankSum=-8.262;DP=656;FS=1.687;HRun=1;HaplotypeScore=66.3881;InbreedingCoeff=0.6603;MQ=67.04;MQ0=0;MQRankSum=-1.704;QD=37.76;ReadPosRankSum=1.862;VQSLOD=4.2425;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,39:39:99:1656,111,0	0/0:7,0:7:21.07:0,21,272	0/0:27,0:27:66.16:0,66,885	0/0:25,0:22:60.16:0,60,751	0/0:35,0:35:99:0,99,1252	0/0:21,0:21:63.19:0,63,803	0/0:23,0:23:63.20:0,63,817	0/0:23,0:23:63.20:0,63,806	0/0:11,0:11:33.09:0,33,413	0/0:24,0:24:69.20:0,69,868	0/0:28,0:28:84.27:0,84,1090	0/0:15,0:15:45.15:0,45,584	0/0:20,0:20:60.20:0,60,779	0/0:20,0:20:60.18:0,60,764	0/0:29,0:29:81.25:0,81,1038	0/1:4,19:23:14.29:791,0,14	0/0:23,0:23:63.20:0,63,817	0/0:19,0:19:57.19:0,57,739	0/0:20,0:20:57.16:0,57,710	0/0:27,0:27:78.25:0,78,1001	0/0:26,0:26:72.18:0,72,889	0/0:25,0:25:66.20:0,66,843	0/0:22,0:22:63.17:0,63,776	0/0:30,0:30:87.26:0,87,1108	0/0:17,0:17:51.17:0,51,662	0/0:27,0:27:81.26:0,81,1052	0/0:39,0:39:99:0,111,1441	0/0:11,0:11:21.07:0,21,273
chr10	41554395	.	AT	A	559.24	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.567;DP=661;FS=0.000;HRun=4;HaplotypeScore=74.6523;InbreedingCoeff=0.9990;MQ=58.45;MQ0=2;MQRankSum=-3.153;QD=27.96;ReadPosRankSum=0.241;VQSLOD=2.9004;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:87.29:0,87,1216	0/0:11,0:11:33.10:0,33,442	0/0:25,0:19:39.11:0,39,491	0/0:17,0:13:33.02:0,33,412	0/0:30,0:30:84.28:0,84,1176	0/0:17,0:17:51.17:0,51,714	0/0:21,0:21:63.21:0,63,881	0/0:40,0:40:99:0,114,1549	0/0:11,0:11:33.11:0,33,462	0/0:23,0:23:69.23:0,69,967	0/0:30,0:30:87.29:0,87,1218	0/0:13,0:13:36.12:0,36,504	0/0:16,0:16:45.15:0,45,630	0/0:19,0:19:54.18:0,54,755	0/0:24,0:24:72.21:0,72,973	0/0:23,0:23:66.22:0,66,924	1/1:3,17:20:56.39:654,56,0	0/0:25,0:25:72.17:0,72,966	0/0:35,0:34:99:0,99,1370	0/0:31,0:31:93.31:0,93,1294	0/0:22,0:22:66.21:0,66,908	0/0:24,0:24:69.23:0,69,966	0/0:24,0:24:69.22:0,69,951	0/0:23,0:23:57.66:0,58,836	0/0:22,0:22:66.22:0,66,924	0/0:30,0:30:87.28:0,87,1203	0/0:35,0:35:99:0,99,1364	0/0:17,0:17:51.17:0,51,702
chr10	41554442	.	T	TA	577.28	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=7.496;DP=679;FS=1.777;HRun=0;HaplotypeScore=67.0727;InbreedingCoeff=0.6633;MQ=56.02;MQ0=6;MQRankSum=-4.001;QD=18.04;ReadPosRankSum=0.346;VQSLOD=5.3692;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:64.26:0,64,1134	0/0:11,0:11:33.09:0,33,443	0/0:24,0:4:12.04:0,12,158	0/1:16,0:4:8.47:8,0,53	0/0:26,0:26:75.24:0,75,1031	0/0:20,0:20:60.18:0,60,819	0/0:23,0:23:69.18:0,69,927	0/0:36,0:36:99:0,105,1394	0/0:19,0:19:54.18:0,54,755	0/0:26,0:26:78.25:0,78,1073	0/0:29,0:29:87.26:0,87,1167	0/0:17,0:17:51.14:0,51,677	0/0:15,0:15:42.14:0,42,587	0/0:12,0:12:36.12:0,36,503	0/0:32,0:32:96.28:0,96,1290	0/0:24,1:25:27.60:0,28,927	1/1:1,15:16:45.15:670,45,0	0/0:33,1:34:45.65:0,46,1211	0/0:34,0:33:93.31:0,93,1295	0/0:35,0:35:99:0,99,1364	0/0:25,0:25:75.24:0,75,1031	0/0:30,0:30:90.30:0,90,1258	0/0:31,0:31:93.31:0,93,1299	0/0:17,0:17:48.15:0,48,655	0/0:30,0:30:87.27:0,87,1184	0/0:24,0:24:69.21:0,69,923	0/0:23,0:23:66.22:0,66,915	0/0:17,0:17:41.70:0,42,662
chr10	41554793	.	A	AT	634.13	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.240;DP=615;FS=0.882;HRun=1;HaplotypeScore=98.1293;InbreedingCoeff=0.9984;MQ=74.75;MQ0=1;MQRankSum=-3.852;QD=27.57;ReadPosRankSum=-0.248;VQSLOD=3.3581;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:60.19:0,60,777	0/0:9,0:9:27.09:0,27,350	0/0:35,0:34:93.15:0,93,1116	0/0:24,0:24:62.99:0,63,763	0/0:28,0:28:81.26:0,81,1049	0/0:28,0:28:78.24:0,78,998	0/0:12,0:12:36.12:0,36,466	0/0:35,0:35:99:0,105,1341	0/0:24,0:24:72.01:0,72,892	0/0:27,0:27:81.22:0,81,1021	0/0:21,0:21:60.19:0,60,766	0/0:23,0:23:69.20:0,69,859	0/0:17,0:17:51.16:0,51,655	0/0:17,0:17:51.17:0,51,662	0/0:25,0:25:72.23:0,72,931	0/0:26,0:26:72.23:0,72,934	1/1:1,22:23:57.10:729,57,0	0/0:23,0:23:69.20:0,69,874	0/0:22,0:19:57.18:0,57,739	0/0:22,0:22:63.19:0,63,804	0/0:25,0:25:72.23:0,72,932	0/0:15,0:15:45.13:0,45,562	0/0:17,0:17:48.16:0,48,622	0/0:12,0:12:33.11:0,33,428	0/0:20,0:20:60.18:0,60,762	0/0:25,0:25:72.23:0,72,934	0/0:27,0:27:81.25:0,81,1033	0/0:12,0:12:36.12:0,36,466
chr10	41555034	.	AT	A	505.67	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.054;DP=517;FS=3.193;HRun=5;HaplotypeScore=67.2886;InbreedingCoeff=0.9898;MQ=63.87;MQ0=0;MQRankSum=-4.799;QD=22.99;ReadPosRankSum=3.960;VQSLOD=2.7470;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:87.26:0,87,1156	0/0:14,0:14:39.07:0,39,480	0/0:18,1:17:35.27:0,35,432	0/0:8,0:8:21.06:0,21,266	0/0:26,0:26:78.25:0,78,1051	0/0:21,0:21:63.20:0,63,844	0/0:11,0:11:33.11:0,33,451	0/0:49,0:49:99:0,135,1832	0/0:14,0:14:36.11:0,36,478	0/0:23,0:23:63.21:0,63,862	0/0:19,0:19:57.19:0,57,778	0/0:18,0:18:51.17:0,51,693	0/0:13,0:13:39.11:0,39,515	0/0:21,0:21:60.19:0,60,805	0/0:20,0:20:57.18:0,57,761	0/0:9,0:9:27.09:0,27,369	1/1:1,21:22:54.14:601,54,0	0/0:12,0:12:33.11:0,33,451	0/0:21,0:21:60.20:0,60,821	0/0:17,0:17:51.17:0,51,698	0/0:13,0:14:39.13:0,39,532	0/0:9,0:9:24.08:0,24,328	0/0:15,0:15:39.13:0,39,529	0/0:10,0:10:24.06:0,24,309	0/0:34,0:34:96.30:0,96,1293	0/0:18,0:18:48.16:0,48,657	0/0:19,0:19:54.18:0,54,736	0/0:12,0:12:36.12:0,36,486
chr10	41556102	.	AACACAC	A	3793.39	PASS	AB=0.594;AC=27;AF=0.482;AN=56;BaseQRankSum=2.676;DP=698;FS=20.619;HRun=0;HaplotypeScore=173.1173;InbreedingCoeff=0.6938;MQ=57.09;MQ0=18;MQRankSum=-3.570;QD=11.03;ReadPosRankSum=1.330;VQSLOD=1.1572;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:32:3.85:80,4,0	0/0:11,0:11:24.08:0,24,792	0/0:52,0:12:14.98:0,15,328	0/0:58,0:15:8.93:0,9,136	0/0:11,0:25:8.79:0,9,181	0/0:7,0:20:30.09:0,30,727	0/0:20,0:30:35.56:0,36,714	0/0:14,0:28:9.70:0,10,190	0/0:18,0:38:81.20:0,81,1961	0/1:7,17:24:53.50:828,0,54	1/1:1,14:15:23.82:238,24,0	1/1:7,18:26:32.85:578,33,0	0/0:2,0:11:24.08:0,24,631	0/0:6,0:20:26.17:0,26,470	1/1:8,15:25:36.05:577,36,0	1/1:4,0:25:9.03:126,9,0	0/0:20,0:20:18.20:0,18,382	1/1:1,7:8:8.98:166,9,0	1/1:8,1:10:4.31:66,4,0	0/1:10,1:30:2.37:2,0,158	0/1:10,0:30:7.32:7,0,9	0/0:11,0:31:41.94:0,42,979	1/1:10,25:37:34.03:402,34,0	1/1:8,13:21:11.98:184,12,0	1/1:4,10:14:17.84:163,18,0	1/1:9,7:25:12.27:310,12,0	1/1:5,1:19:10.98:66,11,0	0/0:0,0:6:0.04:0,0,32
chr10	41556112	.	C	CACACACACACAA	1473.90	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=1.669;DP=733;FS=9.621;HRun=0;HaplotypeScore=258.8222;InbreedingCoeff=-0.1277;MQ=51.47;MQ0=22;MQRankSum=-3.798;QD=5.40;ReadPosRankSum=-1.677;VQSLOD=0.9855;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:34,0:34:99:120,0,223	0/0:11,0:12:30.08:0,30,856	0/0:55,0:10:20.99:0,21,278	0/0:65,0:15:27.28:0,27,220	0/1:29,0:26:57.89:149,0,58	0/0:20,0:20:28.94:0,29,496	0/0:30,0:30:43.46:0,43,639	0/0:26,0:26:36.27:0,36,451	0/0:39,0:38:87.12:0,87,1382	0/1:24,0:24:81.66:82,0,582	0/1:16,0:16:56.66:57,0,179	0/1:27,0:27:78.53:79,0,421	0/0:14,0:14:33.06:0,33,458	0/1:22,0:21:30.83:172,0,31	0/1:21,0:21:72.60:73,0,556	0/1:26,0:26:97.84:98,0,166	1/1:7,11:23:8.94:750,9,0	0/1:12,0:12:17.98:18,0,236	0/1:17,0:15:18.64:19,0,292	0/0:28,0:28:55.41:0,55,880	0/0:34,0:33:56.84:0,57,1235	0/0:34,0:34:34.50:0,34,709	0/0:37,0:37:24.93:0,25,393	0/1:22,0:22:14.49:14,0,313	0/0:15,0:15:26.56:0,27,230	0/0:26,0:26:5.47:0,5,1099	0/0:18,0:18:29.77:0,30,735	0/0:7,0:7:18.05:0,18,453
chr10	41556968	.	CA	C	12403.92	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=18.138;DP=661;FS=7.605;HRun=1;HaplotypeScore=163.5379;InbreedingCoeff=0.9996;MQ=74.98;MQ0=0;MQRankSum=-2.539;QD=39.01;ReadPosRankSum=2.216;VQSLOD=3.6898;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,160,2507	0/0:15,0:15:45.15:0,45,719	0/0:20,0:20:60.10:0,60,872	0/0:19,0:19:57.08:0,57,788	0/0:24,0:24:72.23:0,72,1128	0/0:30,0:30:90.31:0,90,1438	0/0:19,0:19:57.19:0,57,911	1/1:0,22:22:60.20:833,60,0	0/0:27,0:27:81.28:0,81,1289	1/1:0,24:24:66.22:920,66,0	1/1:1,20:21:57.19:796,57,0	1/1:0,22:22:63.21:881,63,0	0/0:25,0:25:75.23:0,75,1164	0/0:21,0:21:63.21:0,63,1007	1/1:0,29:29:87.29:1214,87,0	0/0:24,0:24:69.24:0,69,1103	0/0:31,0:31:90.31:0,90,1430	1/1:0,8:8:24.08:335,24,0	1/1:0,13:13:39.13:536,39,0	1/1:0,28:28:81.27:1129,81,0	1/1:0,36:36:99:1468,105,0	0/0:34,0:34:99:0,99,1536	1/1:0,23:23:63.21:875,63,0	1/1:0,22:22:54.18:755,54,0	1/1:0,23:23:63.21:879,63,0	1/1:0,13:13:39.12:523,39,0	1/1:0,21:21:60.20:839,60,0	1/1:0,13:12:30.10:419,30,0
chr10	41558143	.	GGTA	G	526.85	PASS	AB=0.887;AC=17;AF=0.354;AN=48;BaseQRankSum=4.117;DP=431;FS=0.860;HRun=0;HaplotypeScore=72.6836;InbreedingCoeff=0.3020;MQ=35.29;MQ0=61;MQRankSum=-3.560;QD=3.90;ReadPosRankSum=-0.990;VQSLOD=1.7768;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:18,1:12:15.15:0,15,126	0/0:6,0:5:8.75:0,9,117	0/0:43,0:4:8.86:0,9,98	0/0:45,1:4:9.89:0,10,111	./.	0/1:14,0:13:40.83:41,0,432	0/0:38,0:34:39.83:0,40,1185	0/0:13,1:5:11.97:0,12,192	0/0:18,0:18:43.01:0,43,829	0/1:9,6:10:49.48:267,0,49	./.	1/1:8,5:11:0.05:78,0,0	0/0:17,1:16:6.60:0,7,615	0/1:19,0:9:11.31:11,0,44	1/1:8,1:3:2.02:6,2,0	0/0:16,0:14:11.68:0,12,111	0/0:19,0:18:48.03:0,48,757	./.	0/1:9,3:2:0:0,0,0	1/1:5,1:2:2.76:54,3,0	0/1:10,0:5:0:0,0,0	0/0:20,0:18:14.92:0,15,198	1/1:5,1:4:5.85:61,6,0	./.	0/1:2,1:1:0:0,0,0	0/1:17,1:7:29.08:42,0,29	1/1:7,1:7:6.02:99,6,0	0/0:2,0:1:1.82:0,2,5
chr10	41558144	.	GTA	G	135.28	PASS	AB=0.980;AC=18;AF=0.409;AN=44;BaseQRankSum=3.934;DP=427;FS=0.000;HRun=0;HaplotypeScore=70.7273;InbreedingCoeff=0.2830;MQ=35.08;MQ0=61;MQRankSum=-2.551;QD=0.74;ReadPosRankSum=-0.591;VQSLOD=0.8642;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:12:14.63:0,15,93	0/0:6,0:5:6.26:0,6,36	0/0:44,0:4:9.03:0,9,155	0/1:46,0:4:4.66:5,0,41	./.	0/0:14,0:13:6.86:0,7,398	0/0:37,0:33:61.48:0,61,950	0/0:13,0:5:8.99:0,9,123	0/1:17,1:18:20.72:21,0,545	0/1:15,0:10:30.81:78,0,31	./.	1/1:13,0:11:2.82:14,3,0	0/0:18,0:15:30.14:0,30,414	0/1:18,0:8:9.38:9,0,68	0/0:10,0:3:0.47:0,0,1	0/0:16,0:14:12.08:0,12,67	0/0:19,0:17:46.47:0,46,557	./.	./.	1/1:6,0:2:2.90:16,3,0	0/1:10,0:5:0:0,0,0	0/1:19,1:18:7.96:8,0,109	1/1:6,0:4:5.17:19,5,0	./.	./.	1/1:14,3:7:6.37:72,6,0	1/1:9,0:7:5.25:23,5,0	1/1:2,0:1:1.82:5,2,0
chr10	41558174	.	GGT	G	58.59	PASS	AB=0.961;AC=11;AF=0.250;AN=44;BaseQRankSum=4.132;DP=492;FS=6.331;HRun=0;HaplotypeScore=76.7306;InbreedingCoeff=0.2607;MQ=31.82;MQ0=138;MQRankSum=-3.103;QD=0.72;ReadPosRankSum=0.456;VQSLOD=0.4102;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,1:9:3.37:0,3,20	0/0:5,0:4:5.65:0,6,63	./.	0/0:40,0:2:0:0,0,0	0/0:15,0:10:6.02:0,6,93	0/0:21,0:19:39.10:0,39,502	0/0:52,1:44:84.22:0,84,953	0/1:33,0:8:13.92:14,0,157	0/0:20,0:16:27.09:0,27,369	0/1:13,2:6:23.01:39,0,23	1/1:1,2:2:2.94:18,3,0	0/0:15,1:8:5.65:0,6,28	0/0:16,0:12:1.50:0,2,132	0/0:20,0:10:12.04:0,12,166	1/1:4,2:4:2.99:26,3,0	0/0:13,0:9:2.16:0,2,23	0/0:21,0:18:42.11:0,42,620	./.	0/0:35,0:4:6.02:0,6,78	./.	./.	0/1:16,0:14:18.23:18,0,217	1/1:5,0:2:2.60:10,3,0	./.	./.	0/0:14,0:5:14.36:0,14,107	0/0:9,0:6:5.73:0,6,45	1/1:0,2:2:6.01:57,6,0
chr10	41558202	.	GTGGTA	G	434.25	PASS	AB=0.888;AC=14;AF=0.292;AN=48;BaseQRankSum=5.936;DP=464;FS=1.931;HRun=0;HaplotypeScore=103.1457;InbreedingCoeff=0.4614;MQ=31.91;MQ0=91;MQRankSum=-5.183;QD=5.57;ReadPosRankSum=-1.832;VQSLOD=2.1012;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:14,7:11:21.22:185,0,21	0/0:5,0:5:15.05:0,15,437	0/0:31,0:3:9.03:0,9,158	./.	0/0:18,0:14:15.05:0,15,445	0/0:24,0:21:33.37:0,33,1116	0/0:57,0:50:58.88:0,59,2188	0/0:30,0:11:8.41:0,8,237	0/0:24,0:20:39.81:0,40,966	0/0:12,0:5:10.18:0,10,60	1/1:4,0:2:4.83:19,5,0	1/1:11,0:5:2.83:50,3,0	0/0:24,0:20:47.75:0,48,920	0/0:21,0:19:30.10:0,30,799	0/1:5,0:3:3.48:11,0,3	0/1:9,3:10:2.68:207,0,3	0/0:22,0:20:54.11:0,54,1256	1/1:5,0:2:3.01:52,3,0	0/0:26,0:4:6.02:0,6,149	./.	0/0:19,0:11:2.68:0,3,11	0/0:16,0:16:39.95:0,40,983	1/1:4,0:1:3:26,3,0	./.	./.	1/1:11,0:4:2.97:20,3,0	0/0:8,0:4:5.89:0,6,39	0/1:4,0:3:0.53:2,0,1
chr10	41558203	.	TG	T	304.46	PASS	AB=0.933;AC=15;AF=0.326;AN=46;BaseQRankSum=6.210;DP=446;FS=10.319;HRun=2;HaplotypeScore=93.4762;InbreedingCoeff=0.4442;MQ=32.35;MQ0=80;MQRankSum=-4.765;QD=3.81;ReadPosRankSum=0.318;VQSLOD=-0.5060;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:19,0:10:21.55:70,0,22	0/0:5,0:5:15.05:0,15,219	0/0:30,1:3:9.02:0,9,99	./.	0/0:18,0:14:15.05:0,15,220	0/0:24,0:21:44.13:0,44,613	0/0:57,0:50:88.86:0,89,1273	0/0:28,1:11:5.46:0,5,198	0/0:22,0:19:39.72:0,40,516	0/1:11,0:5:10.32:61,0,10	1/1:3,0:2:5.88:46,6,0	1/1:8,2:5:2.80:24,3,0	0/0:22,1:19:45.01:0,45,591	0/0:20,0:18:30.10:0,30,427	1/1:5,0:3:4.17:41,4,0	0/1:9,3:10:7.95:62,0,8	0/0:22,0:20:48.16:0,48,691	1/1:4,1:2:3.01:35,3,0	0/0:22,0:4:6.02:0,6,85	./.	0/0:18,0:11:2.94:0,3,19	0/0:16,0:16:37.36:0,37,500	./.	./.	./.	1/1:11,0:3:3.01:35,3,0	0/0:8,0:4:6.02:0,6,79	1/1:3,1:3:6.90:77,7,0
chr10	41558204	.	G	GT	397.66	PASS	AB=0.949;AC=16;AF=0.348;AN=46;BaseQRankSum=5.371;DP=424;FS=8.618;HRun=1;HaplotypeScore=92.4174;InbreedingCoeff=0.3571;MQ=33.15;MQ0=70;MQRankSum=-4.564;QD=4.02;ReadPosRankSum=0.172;VQSLOD=-0.1886;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:15,0:10:26.06:65,0,26	0/0:5,0:5:15.05:0,15,207	0/0:32,0:4:9.02:0,9,100	./.	0/0:17,0:13:15.03:0,15,208	0/0:24,0:22:42.62:0,43,553	0/0:55,0:49:88.54:0,89,1188	0/1:25,1:11:30.53:31,0,184	0/0:22,0:19:43.24:0,43,543	0/1:8,2:5:32.79:74,0,33	1/1:1,2:2:6.02:93,6,0	1/1:7,0:3:2.74:18,3,0	0/0:24,0:20:45.13:0,45,579	0/0:19,0:17:30.10:0,30,412	1/1:2,2:2:2.93:41,3,0	0/1:12,0:10:18.33:62,0,18	0/0:21,0:20:48.16:0,48,661	1/1:4,0:2:3.01:35,3,0	0/0:17,0:3:6.02:0,6,84	./.	0/0:15,0:10:2.90:0,3,17	0/0:16,0:16:35.31:0,35,461	./.	./.	./.	1/1:9,0:2:3.01:35,3,0	0/0:6,1:4:6.01:0,6,69	1/1:2,2:3:8.70:94,9,0
chr10	41558272	.	G	GTA	347.88	PASS	AB=0.956;AC=12;AF=0.250;AN=48;BaseQRankSum=6.180;DP=609;FS=62.660;HRun=0;HaplotypeScore=154.1769;InbreedingCoeff=-0.2317;MQ=27.10;MQ0=129;MQRankSum=-5.549;QD=1.12;ReadPosRankSum=1.132;VQSLOD=0.6787;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:20:32.27:47,0,32	0/1:18,1:12:21.86:22,0,241	0/0:61,0:3:7.83:0,8,73	0/0:61,0:2:3.01:0,3,46	0/0:22,0:18:14.88:0,15,161	0/1:24,3:26:99:142,0,294	0/1:34,2:31:7.47:7,0,512	0/1:27,0:11:38.96:39,0,60	0/1:36,2:32:18.21:18,0,370	0/0:12,0:4:10.80:0,11,83	./.	0/0:6,0:5:5.61:0,6,30	0/1:37,3:35:99:137,0,347	0/0:43,0:27:15.31:0,15,165	0/0:7,0:2:0:0,0,0	0/1:22,0:13:16.89:17,0,43	0/1:20,1:18:18.15:18,0,336	0/0:5,0:4:5.95:0,6,24	0/0:28,0:3:5.93:0,6,49	./.	0/0:24,0:10:2.79:0,3,20	0/1:34,3:32:9.19:9,0,259	./.	1/1:15,0:7:4.72:21,5,0	./.	0/0:13,0:5:5.91:0,6,50	0/0:3,0:2:5.93:0,6,49	0/0:7,0:5:3.01:0,3,35
chr10	41558285	.	T	TGC	461.81	PASS	AB=0.960;AC=14;AF=0.292;AN=48;BaseQRankSum=4.609;DP=558;FS=39.052;HRun=0;HaplotypeScore=139.5889;InbreedingCoeff=-0.1953;MQ=26.78;MQ0=86;MQRankSum=-2.868;QD=1.68;ReadPosRankSum=-0.399;VQSLOD=0.9182;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:17:50.47:50,0,74	0/1:16,0:12:9.27:9,0,256	0/0:75,0:7:20.96:0,21,188	0/0:74,0:4:9.86:0,10,94	0/0:18,0:17:11.98:0,12,136	0/1:27,0:26:99:120,0,249	0/1:35,1:34:51.69:52,0,497	0/0:18,0:12:13.27:0,13,88	0/1:34,3:30:99:139,0,297	0/0:9,0:4:11.93:0,12,92	./.	0/0:4,0:4:5.62:0,6,31	0/1:28,2:28:99:152,0,344	0/0:37,0:23:11.61:0,12,136	1/1:4,0:2:2.04:6,2,0	0/1:14,1:12:44.38:44,0,60	0/1:15,0:14:2.24:2,0,348	0/0:5,0:4:5.21:0,5,27	0/0:18,0:2:3:0,3,29	./.	1/1:20,0:9:0.43:1,0,0	0/1:28,8:33:8.42:8,0,272	./.	0/1:12,0:6:0.44:0,0,12	./.	0/0:12,0:4:3.01:0,3,30	0/0:3,0:2:6:0,6,51	0/0:6,0:4:3.01:0,3,34
chr10	41558287	.	TGCGCGC	T	1071.92	PASS	AB=0.943;AC=22;AF=0.458;AN=48;BaseQRankSum=5.598;DP=545;FS=38.117;HRun=0;HaplotypeScore=142.7270;InbreedingCoeff=-0.1207;MQ=26.79;MQ0=82;MQRankSum=-3.939;QD=3.68;ReadPosRankSum=0.502;VQSLOD=0.6172;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:21,0:17:99:180,0,139	0/1:13,2:11:99:118,0,445	0/0:75,0:7:21.07:0,21,490	0/0:75,0:4:7.35:0,7,241	0/0:16,0:16:11.66:0,12,334	0/1:17,6:23:99:163,0,580	0/0:36,1:34:54.45:0,54,1223	0/1:16,0:11:37.62:38,0,73	0/1:38,0:32:22.77:23,0,795	0/1:9,0:4:5.32:5,0,76	./.	1/1:2,2:4:5.62:134,6,0	0/1:26,2:27:99:163,0,702	0/1:36,0:23:29.45:29,0,221	1/1:3,0:2:2.22:7,2,0	0/1:13,0:11:7.13:7,0,174	0/0:13,1:13:6.18:0,6,460	1/1:4,1:4:9.03:194,9,0	1/1:18,0:2:2.74:12,3,0	./.	0/0:19,1:9:2.30:0,2,8	0/1:33,3:35:37.91:38,0,625	./.	0/1:12,0:6:0.78:12,0,1	./.	0/0:12,0:4:3.01:0,3,48	0/1:3,0:2:5.69:48,0,6	1/1:6,0:4:3.01:44,3,0
chr10	41558316	.	TGTG	T	702.20	PASS	AB=0.955;AC=24;AF=0.500;AN=48;BaseQRankSum=3.717;DP=514;FS=19.844;HRun=0;HaplotypeScore=110.9649;InbreedingCoeff=-0.2304;MQ=23.24;MQ0=153;MQRankSum=-1.805;QD=1.91;ReadPosRankSum=0.259;VQSLOD=0.6233;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:13:11.33:88,11,0	0/1:12,4:12:17.03:17,0,217	0/0:39,0:3:6.90:0,7,68	0/0:42,0:3:6.02:0,6,73	0/0:17,0:14:15.05:0,15,289	0/1:19,0:16:99:104,0,169	0/1:25,3:22:51.21:51,0,419	0/1:61,0:23:40.78:41,0,78	0/1:22,4:21:99:130,0,129	1/1:7,0:2:2.80:13,3,0	./.	0/1:12,0:8:33.70:34,0,68	0/1:20,1:15:99:120,0,200	0/0:25,0:18:6.45:0,6,75	1/1:3,0:1:3.01:36,3,0	0/1:14,0:10:13.73:40,0,14	0/1:10,0:9:13.04:13,0,37	1/1:9,0:4:2.47:56,2,0	0/1:43,0:3:12.18:12,0,61	0/1:3,0:1:0:0,0,0	0/1:28,0:7:0.41:0,0,10	0/1:25,4:24:8.34:8,0,109	./.	0/0:14,0:7:1.48:0,1,4	./.	1/1:12,0:2:5.97:57,6,0	0/1:6,0:3:21.25:21,0,32	./.
chr10	41558319	.	G	GC	598.01	PASS	AB=0.893;AC=20;AF=0.435;AN=46;BaseQRankSum=3.416;DP=484;FS=19.976;HRun=0;HaplotypeScore=104.5252;InbreedingCoeff=0.0303;MQ=23.02;MQ0=152;MQRankSum=-2.117;QD=2.40;ReadPosRankSum=-0.612;VQSLOD=1.0220;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:12:11.69:162,12,0	0/0:14,0:11:0.99:0,1,179	0/0:34,0:3:7.25:0,7,70	0/0:36,0:2:6.02:0,6,76	0/0:16,1:14:15.05:0,15,204	0/1:17,1:16:69.03:69,0,144	0/1:22,3:21:35.23:35,0,269	0/0:61,1:24:19.69:0,20,196	0/1:17,7:20:99:125,0,111	1/1:6,0:1:3.01:30,3,0	./.	0/1:12,0:8:13.41:13,0,69	0/1:15,3:14:99:141,0,144	0/0:18,2:14:5.97:0,6,62	1/1:4,0:2:1.64:13,2,0	1/1:11,0:7:11.07:79,11,0	0/0:6,0:6:7.60:0,8,58	0/1:8,0:3:2.20:2,0,15	0/1:44,0:4:7.33:7,0,57	./.	0/0:31,0:8:1.66:0,2,4	0/1:19,3:22:4.46:4,0,139	./.	0/1:13,0:6:0.19:0,0,1	./.	1/1:10,0:2:5.95:47,6,0	0/1:4,0:2:7.26:7,0,19	./.
chr10	41558334	.	G	GC	242.74	PASS	AB=0.953;AC=16;AF=0.364;AN=44;BaseQRankSum=0.860;DP=326;FS=10.628;HRun=0;HaplotypeScore=80.1575;InbreedingCoeff=0.1951;MQ=22.31;MQ0=112;MQRankSum=-0.451;QD=1.67;ReadPosRankSum=0.667;VQSLOD=0.4879;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:8,3:9:11.95:102,12,0	0/0:11,0:9:13.21:0,13,103	0/0:8,0:1:0:0,0,0	./.	0/0:12,0:9:9.03:0,9,114	0/1:10,2:10:36.18:36,0,65	0/0:18,0:13:24.77:0,25,276	0/0:49,1:21:0.06:0,0,206	0/0:12,0:9:6.12:0,6,50	1/1:6,0:1:0.89:2,1,0	./.	1/1:12,0:8:0.43:17,0,0	0/0:11,0:7:5.99:0,6,58	0/0:11,0:9:3.01:0,3,42	0/0:4,0:2:2.74:0,3,12	1/1:6,2:5:5.08:92,5,0	0/0:3,0:3:2.91:0,3,9	0/0:4,0:2:1.36:0,1,3	0/1:38,0:5:23.60:24,0,72	./.	0/1:26,0:7:15.82:22,0,16	1/1:17,0:12:2.47:10,2,0	./.	0/0:11,0:6:0.58:0,1,2	./.	1/1:8,0:2:5.90:42,6,0	0/1:5,0:2:20.42:20,0,35	./.
chr10	41558428	.	GGT	G	92.34	PASS	AB=0.927;AC=7;AF=0.140;AN=50;BaseQRankSum=3.019;DP=327;FS=0.000;HRun=0;HaplotypeScore=78.4862;InbreedingCoeff=0.1809;MQ=43.21;MQ0=48;MQRankSum=-2.881;QD=0.94;ReadPosRankSum=-0.230;VQSLOD=1.4706;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:7,0:5:0.22:0,0,1	0/0:8,0:8:2.14:0,2,140	1/1:30,0:2:1.44:9,1,0	0/0:24,0:4:5.92:0,6,77	./.	0/0:16,0:15:17.34:0,17,271	0/0:35,0:29:50.15:0,50,633	0/0:22,1:17:24.05:0,24,302	0/0:13,0:11:2.64:0,3,96	0/0:9,0:5:10.51:0,11,78	0/1:3,0:2:0.02:0,0,0	0/0:4,0:2:3.01:0,3,31	0/1:12,1:11:21.18:21,0,122	0/1:12,7:16:13.90:151,0,14	0/0:8,0:4:0:0,0,0	0/0:5,0:2:2.99:0,3,23	0/0:7,0:5:5.35:0,5,77	0/0:1,0:1:2.80:0,3,13	0/0:15,0:2:6:0,6,60	./.	0/1:21,1:11:0:0,0,1	0/0:19,0:19:20.64:0,21,322	0/0:4,0:2:0.89:0,1,2	0/0:3,0:2:0:0,0,0	0/0:3,0:3:4.96:0,5,19	0/0:11,0:5:3.21:0,3,64	./.	0/0:2,0:1:2.99:0,3,23
chr10	41558438	.	TGTGTG	T	120.83	PASS	AB=0.976;AC=10;AF=0.185;AN=54;BaseQRankSum=5.187;DP=466;FS=0.000;HRun=0;HaplotypeScore=114.5408;InbreedingCoeff=0.1054;MQ=37.04;MQ0=82;MQRankSum=-2.844;QD=0.83;ReadPosRankSum=-1.014;VQSLOD=1.7984;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,0:6:2.20:13,2,0	0/1:8,1:8:43.13:43,0,269	0/0:35,0:2:6.02:0,6,105	0/0:28,0:4:8.71:0,9,148	0/1:17,0:12:0:0,0,0	0/0:22,0:19:14.68:0,15,537	0/0:53,3:44:38.26:0,38,1545	0/0:39,0:28:41.97:0,42,785	0/1:19,0:14:43.63:44,0,224	0/0:16,0:8:17.46:0,17,265	0/0:6,0:5:3.48:0,3,42	0/1:9,0:4:30.15:30,0,32	0/1:20,1:16:79.14:79,0,248	0/1:31,0:24:24.90:25,0,164	0/0:11,0:5:0.34:0,0,1	0/0:10,0:6:5.05:0,5,69	0/0:11,0:8:8.01:0,8,232	0/0:1,0:1:2.50:0,2,9	0/0:21,0:3:9.03:0,9,170	./.	1/1:28,0:13:0.95:4,1,0	0/0:24,0:22:23.58:0,24,688	0/0:7,0:4:0.89:0,1,2	0/0:6,0:4:0.26:0,0,0	0/0:3,0:3:0.13:0,0,3	0/0:14,0:6:13.68:0,14,149	0/0:3,0:2:5.91:0,6,38	0/0:1,0:1:3.01:0,3,61
chr10	41558443	.	GGTA	G	423.34	PASS	AB=0.933;AC=20;AF=0.370;AN=54;BaseQRankSum=5.225;DP=500;FS=0.854;HRun=0;HaplotypeScore=119.5227;InbreedingCoeff=-0.0315;MQ=34.83;MQ0=88;MQRankSum=-4.594;QD=1.91;ReadPosRankSum=-1.444;VQSLOD=1.4374;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,3:6:2.91:27,3,0	0/1:5,3:8:99:113,0,199	0/0:32,0:2:6.02:0,6,106	0/0:34,0:4:7.27:0,7,126	0/0:12,1:12:5.87:0,6,35	0/1:21,0:19:8.68:9,0,433	0/0:57,3:51:44.27:0,44,1566	0/0:43,0:29:33.73:0,34,627	0/1:16,1:15:60.41:60,0,227	0/0:15,0:8:11.25:0,11,293	0/1:7,1:7:19.34:19,0,55	0/1:11,0:6:9.92:43,0,10	0/1:17,2:16:99:101,0,258	0/1:27,4:25:39.17:39,0,254	1/1:10,2:6:0.09:0,0,0	0/1:9,0:6:11.65:12,0,52	0/1:15,0:11:6.22:6,0,237	1/1:0,0:1:3.01:34,3,0	0/0:23,0:3:9.03:0,9,176	./.	1/1:30,1:15:2.54:20,3,0	0/0:22,0:23:24.30:0,24,583	0/0:10,0:5:2.73:0,3,19	0/0:5,0:4:0.15:0,0,0	1/1:1,1:4:5.32:74,5,0	0/1:14,1:7:10.67:11,0,69	0/0:3,0:2:5.91:0,6,46	0/0:3,0:1:3.01:0,3,59
chr10	41558444	.	GTA	G	123.75	PASS	AB=0.951;AC=17;AF=0.315;AN=54;BaseQRankSum=4.911;DP=511;FS=0.847;HRun=0;HaplotypeScore=120.2355;InbreedingCoeff=-0.0314;MQ=34.86;MQ0=86;MQRankSum=-4.487;QD=0.52;ReadPosRankSum=-0.800;VQSLOD=2.3384;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:7:2.80:0,3,14	0/1:9,0:8:21.05:21,0,155	0/0:31,0:2:6.02:0,6,75	0/0:35,0:4:6.46:0,6,58	0/0:16,0:12:6:0,6,59	0/1:20,2:19:39.81:40,0,341	0/0:58,5:51:83.45:0,83,1436	0/1:45,1:31:59.38:59,0,396	0/0:19,1:15:0.75:0,1,228	0/1:17,0:9:15.83:16,0,212	0/1:8,0:7:0.21:0,0,59	1/1:10,2:7:0.61:28,1,0	0/1:21,0:16:15.68:16,0,199	0/1:28,5:26:8.77:9,0,269	0/1:11,1:6:0.01:0,0,0	0/0:10,0:6:5.69:0,6,51	0/0:14,1:11:10.72:0,11,268	1/1:1,0:1:2.60:10,3,0	0/0:23,0:3:8.52:0,9,122	./.	0/1:29,3:15:0.89:15,0,1	0/0:27,0:25:8.17:0,8,491	0/0:10,0:5:3.01:0,3,53	0/1:5,1:4:0:0,0,0	1/1:5,0:4:4.46:17,4,0	0/1:16,0:7:23.83:24,0,66	0/0:3,0:2:2.65:0,3,28	0/0:3,0:1:3.01:0,3,48
chr10	41558453	.	TGTGTG	T	209.72	PASS	AB=0.993;AC=15;AF=0.268;AN=56;BaseQRankSum=6.099;DP=656;FS=5.108;HRun=0;HaplotypeScore=150.6368;InbreedingCoeff=-0.1352;MQ=31.64;MQ0=121;MQRankSum=-4.150;QD=0.72;ReadPosRankSum=-0.412;VQSLOD=2.3043;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:7:2.41:23,2,0	0/0:10,0:9:5.56:0,6,392	0/0:27,0:2:6.01:0,6,104	0/1:42,0:4:0.82:1,0,59	0/0:29,1:24:9.01:0,9,101	0/1:27,1:25:31.87:32,0,654	0/0:77,0:66:51.31:0,51,2381	0/0:57,0:41:32.84:0,33,1162	0/1:31,0:24:41.67:42,0,542	0/1:25,0:11:19.56:20,0,377	0/1:9,0:8:6.97:7,0,98	0/1:16,0:8:3.41:46,0,3	0/1:30,1:23:78.59:79,0,565	0/1:42,1:34:39.56:40,0,322	0/0:15,0:6:0.36:0,0,1	0/0:10,0:6:5.69:0,6,74	0/1:16,0:11:16.63:17,0,429	0/0:3,0:1:2.60:0,3,10	0/0:36,0:6:18.05:0,18,370	0/1:4,0:3:0:0,0,0	0/0:39,0:16:0.46:0,0,13	0/0:31,1:30:0.48:0,0,825	0/0:13,0:8:2.97:0,3,77	0/0:6,0:4:0.26:0,0,0	0/1:6,0:4:0.19:2,0,0	0/1:22,0:9:24.50:24,0,232	0/1:3,0:2:5.28:5,0,25	0/0:4,0:1:2.92:0,3,17
chr10	41558458	.	GGTA	G	470.01	PASS	AB=0.939;AC=16;AF=0.308;AN=52;BaseQRankSum=5.291;DP=680;FS=3.288;HRun=0;HaplotypeScore=146.1944;InbreedingCoeff=-0.1195;MQ=31.54;MQ0=134;MQRankSum=-4.523;QD=1.52;ReadPosRankSum=-1.699;VQSLOD=2.5112;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:12,0:7:10.29:36,0,10	0/0:10,0:9:13.60:0,14,316	0/0:28,0:2:3.01:0,3,53	0/0:39,0:4:3.01:0,3,62	0/0:30,1:24:8.84:0,9,73	0/1:24,0:25:49.84:50,0,496	0/0:76,1:67:30.89:0,31,1875	0/1:66,1:46:26.65:27,0,1104	0/1:33,0:25:69.55:70,0,533	0/1:25,4:11:91.17:91,0,299	0/1:5,3:8:34.82:35,0,71	1/1:13,3:9:8.24:94,8,0	0/1:29,1:24:25.81:26,0,513	0/1:40,0:33:11.88:12,0,144	0/0:12,2:6:0.07:0,0,0	0/0:9,0:6:2.66:0,3,59	0/0:14,0:12:2.80:0,3,385	1/1:3,0:1:3.01:33,3,0	0/0:39,0:9:12.44:0,12,270	./.	0/0:37,3:17:1.46:0,1,25	0/0:28,1:29:5.17:0,5,667	0/0:12,2:8:2.57:0,3,73	0/0:5,2:4:0.15:0,0,0	1/1:4,1:4:5.07:74,5,0	0/1:23,3:9:53.04:53,0,180	0/1:3,0:2:10.62:11,0,25	./.
chr10	41558459	.	GTA	G	93.96	PASS	AB=0.960;AC=18;AF=0.360;AN=50;BaseQRankSum=6.381;DP=678;FS=7.474;HRun=0;HaplotypeScore=144.5746;InbreedingCoeff=-0.0961;MQ=31.65;MQ0=133;MQRankSum=-3.520;QD=0.35;ReadPosRankSum=-0.509;VQSLOD=2.1486;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:14,0:7:12.51:13,0,15	0/1:10,0:9:12.51:13,0,203	./.	0/0:39,0:4:2.33:0,2,53	0/0:31,0:24:8.45:0,8,51	0/1:27,1:25:32.42:32,0,334	0/0:79,0:67:62.59:0,63,1305	0/0:67,0:46:17.41:0,17,518	0/0:33,0:24:2.97:0,3,435	0/1:30,0:11:18.76:19,0,146	0/1:8,0:8:12.69:13,0,15	1/1:16,1:9:0.73:35,1,0	0/0:31,0:24:13.27:0,13,356	0/1:42,1:33:16.32:16,0,47	0/1:15,0:7:0.05:0,0,1	0/0:10,0:6:5.75:0,6,47	0/1:17,0:13:4.73:5,0,343	1/1:3,0:1:2.60:10,3,0	0/1:36,2:9:33.74:34,0,151	./.	0/0:40,0:17:4.27:0,4,20	0/0:30,0:28:27.16:0,27,506	0/0:12,1:8:2.86:0,3,41	0/1:7,0:4:0:0,0,0	1/1:6,0:4:4.46:17,4,0	0/1:27,1:10:1.60:2,0,96	0/1:1,1:2:18.15:18,0,24	./.
chr10	41558461	.	ATGTG	A	356.23	PASS	AB=0.979;AC=12;AF=0.231;AN=52;BaseQRankSum=5.323;DP=703;FS=21.569;HRun=0;HaplotypeScore=166.1509;InbreedingCoeff=-0.1581;MQ=30.21;MQ0=135;MQRankSum=-4.233;QD=1.45;ReadPosRankSum=-1.138;VQSLOD=1.4138;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:15,0:8:11.65:12,0,29	0/1:12,0:10:29.27:29,0,286	./.	0/0:37,0:4:3.01:0,3,65	0/1:29,2:24:38.78:41,0,39	0/0:28,0:27:15.88:0,16,513	0/0:79,0:68:75.22:0,75,1664	0/0:68,0:48:36.34:0,36,509	0/0:34,0:26:18.28:0,18,644	0/1:32,0:11:2.09:2,0,172	0/1:9,0:9:7.46:7,0,20	0/1:17,0:9:29.57:38,0,30	0/1:34,0:27:54.90:55,0,567	0/1:36,7:34:18.06:273,0,18	0/0:17,0:9:3.84:0,4,22	0/0:9,0:6:4.83:0,5,54	0/0:18,0:14:24.07:0,24,459	0/0:3,0:1:3.01:0,3,32	0/0:44,0:14:21.56:0,22,293	0/0:8,0:7:2.67:0,3,11	1/1:41,0:17:0.79:2,1,0	0/0:30,0:27:20.84:0,21,706	0/0:15,0:8:6.82:0,7,66	0/1:8,0:5:0.05:0,0,1	0/0:6,0:4:5.96:0,6,50	0/0:29,0:11:8.61:0,9,103	0/1:2,0:2:21.10:22,0,21	./.
chr10	41558478	.	TGTGTG	T	433.17	PASS	AB=0.985;AC=15;AF=0.288;AN=52;BaseQRankSum=6.243;DP=830;FS=6.838;HRun=0;HaplotypeScore=217.2789;InbreedingCoeff=-0.2049;MQ=30.27;MQ0=149;MQRankSum=-5.929;QD=1.12;ReadPosRankSum=1.575;VQSLOD=1.9919;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:19,0:14:3.20:3,0,113	0/1:15,2:15:99:141,0,380	./.	0/0:35,0:1:3.01:0,3,68	0/0:42,1:37:21.95:0,22,278	0/1:34,0:32:53.19:53,0,848	0/0:89,0:75:18.76:0,19,1764	0/0:58,0:40:25.92:0,26,662	0/1:46,0:34:16.08:16,0,976	0/0:30,0:14:18.37:0,18,192	0/0:14,0:14:0.61:0,1,35	0/1:26,0:22:7.03:7,0,69	0/1:37,3:35:99:195,0,1061	0/1:54,1:46:33.62:34,0,254	0/1:15,0:10:9.39:20,0,9	0/1:14,0:9:8.70:24,0,9	0/1:22,0:18:6.28:6,0,333	0/0:6,0:4:3:0,3,28	0/1:54,0:21:2.05:2,0,449	0/0:14,0:12:10.66:0,11,68	0/0:50,0:26:2.47:0,2,21	0/0:38,0:34:1.58:0,2,1109	0/0:21,0:12:7.13:0,7,70	0/0:13,0:11:3.73:0,4,9	0/1:7,0:5:0.25:0,0,0	0/1:32,0:15:18.23:18,0,133	1/1:3,0:3:7.77:48,8,0	./.
chr10	41558483	.	GGT	G	918.17	PASS	AB=0.916;AC=16;AF=0.320;AN=50;BaseQRankSum=4.038;DP=820;FS=9.391;HRun=0;HaplotypeScore=199.8472;InbreedingCoeff=0.0547;MQ=30.97;MQ0=141;MQRankSum=-1.465;QD=2.97;ReadPosRankSum=-1.499;VQSLOD=1.3416;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:13:14.33:0,14,179	0/0:20,0:17:6.48:0,6,331	./.	./.	0/0:35,1:32:26.21:0,26,376	0/0:34,0:34:13.65:0,14,681	0/0:85,0:72:5.54:0,6,1176	0/0:51,2:33:11.58:0,12,382	0/0:45,1:34:57.67:0,58,769	0/1:24,3:11:47.51:48,0,72	1/1:8,5:13:3.24:21,3,0	0/1:13,13:22:2.67:129,0,3	0/0:41,0:37:6.54:0,7,719	0/0:47,0:44:3.14:0,3,363	0/1:14,2:10:4.18:28,0,4	0/1:12,1:9:0:0,0,0	0/1:23,0:19:27.37:129,0,27	0/0:6,0:4:3.01:0,3,36	0/1:50,0:19:28.88:29,0,133	0/1:10,2:12:16.47:167,0,16	0/1:46,0:25:10.76:97,0,11	0/0:38,1:35:33.09:0,33,742	0/1:21,1:13:33.52:113,0,34	1/1:14,2:14:20.74:224,21,0	0/0:7,1:5:0:0,0,0	0/1:31,2:17:51.30:51,0,62	1/1:5,0:5:3:27,3,0	./.
chr10	41558498	.	G	GC	122.71	PASS	AB=0.798;AC=2;AF=0.037;AN=54;BaseQRankSum=5.469;DP=795;FS=50.194;HRun=0;HaplotypeScore=191.3091;InbreedingCoeff=-0.0318;MQ=36.02;MQ0=81;MQRankSum=-4.013;QD=2.08;ReadPosRankSum=-2.492;VQSLOD=1.3294;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:9,10:17:16.55:196,0,17	0/0:18,0:15:36:0,36,457	0/0:28,0:5:15.03:0,15,190	0/0:32,0:4:8.98:0,9,81	0/0:42,0:38:48.12:0,48,645	0/1:37,1:37:6.37:6,0,754	0/0:68,1:61:99:0,123,1350	0/0:48,0:32:61.26:0,61,738	0/0:44,3:39:2.02:0,2,845	0/0:17,0:8:20.96:0,21,229	0/0:16,0:16:12.01:0,12,150	0/0:25,0:24:21:0,21,209	0/0:42,1:40:42.95:0,43,1134	0/0:49,0:42:7.13:0,7,558	0/0:19,0:17:11.05:0,11,213	./.	0/0:25,0:23:42.20:0,42,554	0/0:9,0:8:9.02:0,9,108	0/0:31,0:11:13.92:0,14,268	0/0:16,0:16:32.83:0,33,342	0/0:47,0:32:31.28:0,31,308	0/0:40,0:36:58.38:0,58,755	0/0:22,0:19:30.71:0,31,307	0/0:24,0:18:26.31:0,26,226	0/0:9,0:7:6.27:0,6,80	0/0:23,0:18:20.56:0,21,308	0/0:8,0:8:8.99:0,9,104	0/0:3,0:1:2.74:0,3,12
chr10	41558501	.	A	ATG	2843.78	PASS	AB=0.815;AC=18;AF=0.333;AN=54;BaseQRankSum=0.541;DP=793;FS=22.941;HRun=0;HaplotypeScore=193.4794;InbreedingCoeff=0.6195;MQ=37.04;MQ0=71;MQRankSum=-2.177;QD=11.51;ReadPosRankSum=-5.205;VQSLOD=1.3132;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:18:6.63:0,7,20	0/0:18,0:15:7.94:0,8,233	0/0:29,0:5:15.04:0,15,172	0/0:31,0:6:14.94:0,15,134	0/0:41,0:38:48.15:0,48,585	0/0:37,0:36:44.61:0,45,577	0/0:68,0:60:51.73:0,52,745	0/1:37,9:30:1.03:460,0,1	0/0:47,0:40:72.67:0,73,872	1/1:13,5:10:16.28:213,16,0	1/1:5,11:16:15.03:225,15,0	0/0:27,0:24:15.17:0,15,212	0/0:43,0:40:65.07:0,65,805	0/0:51,0:46:43.77:0,44,527	0/1:10,11:20:22.09:305,0,22	./.	0/0:25,0:23:42.10:0,42,465	1/1:0,7:7:6.02:97,6,0	0/1:27,1:11:26.16:75,0,26	1/1:5,12:16:33.10:517,33,0	1/1:41,11:36:46.53:601,47,0	0/0:38,0:35:47.95:0,48,570	0/0:23,0:20:33.09:0,33,391	0/0:23,0:18:27.08:0,27,330	1/1:3,5:6:12.04:194,12,0	0/1:17,7:19:26.91:206,0,27	1/1:1,6:7:9.03:138,9,0	0/0:4,0:2:0.47:0,0,1
chr10	41558518	.	CGT	C	447.96	PASS	AC=2;AF=0.037;AN=54;BaseQRankSum=3.229;DP=768;FS=9.262;HRun=0;HaplotypeScore=166.4146;InbreedingCoeff=0.8437;MQ=45.11;MQ0=19;MQRankSum=-0.157;QD=19.48;ReadPosRankSum=2.195;VQSLOD=3.7903;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:25:21.07:0,21,314	0/0:18,0:16:29.46:0,29,459	0/0:45,0:12:30.34:0,30,394	0/0:46,0:15:40.66:0,41,505	0/0:36,0:34:57.19:0,57,967	0/0:30,0:30:51.17:0,51,845	0/0:49,0:45:65.90:0,66,1069	0/0:45,0:35:79.63:0,80,1086	0/0:40,0:38:74.92:0,75,1229	0/0:22,0:17:31.30:0,31,518	0/0:16,0:16:23.91:0,24,383	0/0:24,0:23:33.04:0,33,511	0/0:35,0:35:75.04:0,75,1110	0/0:46,0:42:58.02:0,58,935	0/0:20,0:18:29.27:0,29,448	./.	1/1:3,20:22:36.48:542,36,0	0/0:12,0:12:18.02:0,18,232	0/0:20,0:13:23.87:0,24,343	0/0:23,0:23:60.06:0,60,894	0/0:49,0:40:54.15:0,54,860	0/0:35,0:33:56.86:0,57,907	0/0:22,0:21:38.95:0,39,630	0/0:25,0:21:33.09:0,33,528	0/0:11,0:11:27.08:0,27,397	0/0:26,0:24:48.95:0,49,682	0/0:8,0:8:9.03:0,9,150	0/0:2,0:2:5.98:0,6,71
chr10	41558676	.	GC	G	706.54	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.439;DP=602;FS=22.576;HRun=4;HaplotypeScore=69.5625;InbreedingCoeff=0.9883;MQ=74.09;MQ0=0;MQRankSum=-6.950;QD=23.55;ReadPosRankSum=1.037;VQSLOD=2.0295;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,10:11:17.97:183,18,0	0/0:10,0:10:27.09:0,27,376	0/0:12,0:12:27.05:0,27,341	0/0:14,0:14:31.50:0,32,375	0/0:22,0:22:54.18:0,54,754	0/0:22,0:22:66.20:0,66,891	0/0:20,0:20:57.16:0,57,762	0/0:27,0:27:81.25:0,81,1091	0/0:24,0:24:72.22:0,72,987	0/0:21,0:21:57.19:0,57,790	0/0:15,0:15:39.13:0,39,545	0/0:23,0:23:63.20:0,63,865	0/0:29,0:29:84.28:0,84,1175	0/0:40,0:40:99:0,117,1583	0/0:30,0:30:87.29:0,87,1217	1/1:0,19:19:54.16:643,54,0	0/0:26,0:26:78.25:0,78,1076	0/0:7,0:7:21.07:0,21,294	0/0:20,0:20:57.09:0,57,755	0/0:17,0:17:51.15:0,51,695	0/0:46,0:46:99:0,138,1859	0/0:30,0:30:75.25:0,75,1046	0/0:15,0:15:39.12:0,39,524	0/0:24,0:24:66.12:0,66,882	0/0:30,0:30:87.28:0,87,1202	0/0:24,0:24:72.24:0,72,1007	0/0:18,0:18:51.14:0,51,686	0/0:6,0:6:18.06:0,18,252
chr10	41558909	.	ATAGAG	A	642.05	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.619;DP=707;FS=2.448;HRun=0;HaplotypeScore=125.9500;InbreedingCoeff=0.9017;MQ=67.56;MQ0=0;MQRankSum=-5.811;QD=26.75;ReadPosRankSum=1.368;VQSLOD=3.5872;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,14:16:33.11:686,33,0	0/0:19,0:19:54.19:0,54,1633	0/0:28,0:26:60.14:0,60,1578	0/0:20,0:19:57.14:0,57,1529	0/0:43,0:43:99:0,129,3919	0/0:26,0:26:72.23:0,72,2135	0/0:9,0:9:27.07:0,27,716	0/0:33,0:33:96.31:0,96,2677	0/0:32,0:32:96.33:0,96,2978	0/0:33,0:33:96.33:0,96,2920	0/0:34,0:34:99:0,99,3015	0/0:22,0:22:63.20:0,63,1850	0/0:24,0:24:72.25:0,72,2172	0/0:33,0:33:99:0,99,2955	0/0:30,0:30:84.27:0,84,2410	1/1:1,7:8:3.01:65,3,0	0/0:24,0:24:69.24:0,69,2122	0/0:13,0:13:39.13:0,39,1101	0/0:15,0:15:45.15:0,45,1333	0/0:54,0:54:99:0,160,4792	0/0:13,0:12:39.12:0,39,1166	0/0:18,0:18:51.16:0,51,1490	0/0:30,0:30:84.29:0,84,2593	0/0:22,0:22:63.20:0,63,1872	0/0:37,0:37:99:0,105,3200	0/0:26,0:26:78.26:0,78,2384	0/0:35,0:35:99:0,102,3022	0/0:10,0:10:30.09:0,30,823
chr10	41559119	.	C	CCAACCCT	2565.10	PASS	AB=0.531;AC=3;AF=0.054;AN=56;BaseQRankSum=0.696;DP=562;FS=0.000;HRun=0;HaplotypeScore=126.1914;InbreedingCoeff=0.6442;MQ=77.75;MQ0=1;MQRankSum=-7.767;QD=69.33;ReadPosRankSum=-0.050;VQSLOD=3.8435;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,16:20:36.12:1448,36,0	0/0:7,0:7:21.02:0,21,404	0/0:10,0:10:30.10:0,30,829	0/0:19,0:18:45.12:0,45,965	0/0:29,0:29:87.28:0,87,2248	0/0:20,0:20:60.21:0,60,1651	0/0:10,0:10:30.09:0,30,727	0/0:34,0:34:99:0,102,2632	0/0:24,0:24:72.23:0,72,1839	0/0:15,0:15:45.15:0,45,1201	0/0:22,0:22:66.21:0,66,1775	0/0:26,0:26:75.26:0,75,2015	0/0:23,0:23:66.23:0,66,1845	0/0:25,0:25:75.26:0,75,2015	0/0:20,0:20:60.21:0,60,1639	0/1:2,12:17:50.78:1223,0,51	0/0:26,0:26:72.23:0,72,1874	0/0:22,0:22:60.21:0,60,1599	0/0:20,0:20:60.21:0,60,1466	0/0:23,0:23:63.22:0,63,1703	0/0:35,0:35:99:0,105,2778	0/0:8,0:8:24.06:0,24,530	0/0:19,0:19:57.20:0,57,1515	0/0:11,0:11:33.07:0,33,817	0/0:20,0:20:60.19:0,60,1595	0/0:20,0:20:57.20:0,57,1590	0/0:23,0:23:66.23:0,66,1817	0/0:14,0:14:39.11:0,39,1027
chr10	41559276	.	G	GA	810.81	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-5.421;DP=539;FS=1.743;HRun=6;HaplotypeScore=52.3542;InbreedingCoeff=0.9929;MQ=70.40;MQ0=0;MQRankSum=-0.204;QD=28.96;ReadPosRankSum=1.091;VQSLOD=4.2445;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:42.10:0,42,428	0/0:10,0:10:30.05:0,30,300	0/0:17,0:16:29.03:0,29,275	0/0:9,0:9:21.04:0,21,212	0/0:31,0:31:81.18:0,81,826	0/0:19,0:19:51.11:0,51,520	0/0:10,0:10:30.07:0,30,306	0/0:27,0:27:69.14:0,69,698	0/0:15,0:15:45.10:0,45,459	0/0:21,0:21:60.12:0,60,606	0/0:22,0:22:66.15:0,66,673	0/0:19,0:19:51.11:0,51,520	0/0:18,0:18:48.08:0,48,481	0/0:20,0:20:46.64:0,47,487	0/0:24,0:24:60.12:0,60,606	0/0:11,0:11:30.07:0,30,306	1/1:2,26:28:72.23:906,72,0	0/0:23,0:23:66.15:0,66,673	0/0:22,0:22:57.13:0,57,581	0/0:32,0:32:84.17:0,84,850	0/0:18,0:18:48.11:0,48,490	0/0:21,0:21:60.14:0,60,612	0/0:21,0:21:51.11:0,51,520	0/0:14,0:14:33.07:0,33,337	0/0:19,0:19:54.12:0,54,551	0/0:19,0:19:48.10:0,48,485	0/0:19,0:19:48.10:0,48,490	0/0:14,0:14:30.06:0,30,306
chr10	41559368	.	TC	T	527.46	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=4.976;DP=427;FS=6.908;HRun=1;HaplotypeScore=38.9558;InbreedingCoeff=0.8241;MQ=62.63;MQ0=0;MQRankSum=-0.900;QD=25.12;ReadPosRankSum=2.171;VQSLOD=3.2302;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,12:12:24.04:312,24,0	0/0:2,0:2:6.02:0,6,94	0/0:6,0:6:17.99:0,18,228	0/0:2,0:1:3.01:0,3,47	0/0:27,0:27:78.25:0,78,1194	0/0:14,0:14:42.13:0,42,630	0/0:2,0:2:6.02:0,6,94	0/0:24,0:24:72.23:0,72,1089	0/0:14,0:14:42.13:0,42,633	0/0:25,0:25:72.24:0,72,1108	0/0:22,0:22:63.20:0,63,960	0/0:16,0:16:45.15:0,45,704	0/0:24,0:24:72.21:0,72,1076	0/0:12,0:12:36.11:0,36,537	0/0:19,0:19:57.19:0,57,890	1/1:0,9:9:24.08:336,24,0	0/0:21,0:21:60.20:0,60,936	0/0:14,0:14:39.13:0,39,604	0/0:15,0:14:42.14:0,42,655	0/0:36,0:36:99:0,108,1663	0/0:8,0:8:24.08:0,24,375	0/0:10,0:10:30.10:0,30,462	0/0:18,0:18:54.17:0,54,819	0/0:9,0:9:27.09:0,27,420	0/0:17,0:17:51.16:0,51,772	0/0:20,0:20:60.20:0,60,918	0/0:17,0:17:51.16:0,51,773	0/0:12,0:10:33.08:0,33,489
chr10	41560475	.	TTCTC	T	4315.97	PASS	AB=0.520;AC=9;AF=0.161;AN=56;BaseQRankSum=10.593;DP=611;FS=1.493;HRun=0;HaplotypeScore=99.1608;InbreedingCoeff=0.8269;MQ=68.62;MQ0=0;MQRankSum=-1.635;QD=41.50;ReadPosRankSum=5.283;VQSLOD=5.3285;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:72.25:0,72,1936	0/0:6,0:6:15.03:0,15,358	0/0:25,0:25:69.14:0,69,1692	0/0:14,0:14:36.12:0,36,962	0/0:23,0:23:54.19:0,54,1455	0/0:26,0:26:72.25:0,72,1971	0/0:16,0:16:48.16:0,48,1280	0/0:30,0:30:84.29:0,84,2350	0/0:28,0:28:72.20:0,72,1901	1/1:1,18:18:51.17:984,51,0	0/1:1,12:10:58.53:338,0,59	0/0:24,0:24:63.22:0,63,1761	0/0:21,0:21:57.20:0,57,1585	0/0:21,0:21:60.21:0,60,1645	1/1:2,28:30:72.25:1437,72,0	0/0:16,0:16:48.16:0,48,1333	0/0:20,1:21:3.53:0,4,1575	1/1:1,16:16:42.14:838,42,0	0/0:24,0:23:66.23:0,66,1847	0/0:28,0:26:69.24:0,69,1892	0/0:16,0:16:45.14:0,45,1199	0/0:28,0:28:72.25:0,72,1983	0/0:26,0:24:60.21:0,60,1649	0/0:19,0:19:54.14:0,54,1446	1/1:3,22:22:36.12:718,36,0	0/0:29,1:30:27.39:0,27,2149	0/0:33,0:33:99:0,99,2676	0/0:7,0:7:21.07:0,21,587
chr10	41560801	.	GC	G	531.70	PASS	AC=18;AF=0.450;AN=40;BaseQRankSum=5.924;DP=264;FS=3.182;HRun=2;HaplotypeScore=81.0848;InbreedingCoeff=0.7934;MQ=77.46;MQ0=1;MQRankSum=-1.278;QD=13.29;ReadPosRankSum=-2.235;VQSLOD=2.0453;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,7:8:8.93:76,9,0	0/0:8,0:8:21.07:0,21,300	0/0:32,0:25:59.71:0,60,757	0/0:38,0:24:7.10:0,7,451	0/0:23,0:18:36.03:0,36,467	0/0:11,0:12:26.88:0,27,332	0/0:14,0:15:32.98:0,33,407	1/1:0,5:5:12.04:155,12,0	0/0:23,0:23:47.10:0,47,785	1/1:0,2:1:3.01:39,3,0	./.	1/1:1,2:3:9.03:110,9,0	0/0:13,0:15:32.51:0,33,445	0/0:13,0:13:35.86:0,36,491	./.	./.	0/0:7,0:7:15.52:0,16,217	1/1:1,4:5:6.02:78,6,0	./.	1/1:0,7:7:5.97:58,6,0	./.	0/0:16,0:13:36.13:0,36,422	1/1:1,4:5:2.96:19,3,0	./.	./.	1/1:1,3:3:9.03:116,9,0	./.	1/1:0,1:1:3.01:39,3,0
chr10	41560827	.	GACCT	G	33.62	PASS	AB=0.600;AC=5;AF=0.179;AN=28;BaseQRankSum=4.559;DP=150;FS=4.568;HRun=0;HaplotypeScore=74.9697;InbreedingCoeff=0.4251;MQ=65.08;MQ0=0;MQRankSum=-2.417;QD=4.20;ReadPosRankSum=1.211;VQSLOD=1.0725;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:2,0:2:6.02:0,6,167	0/0:12,0:11:16.92:0,17,556	0/0:17,0:11:32.88:0,33,663	0/0:16,0:10:16.61:0,17,334	0/0:15,0:15:11.54:0,12,814	0/0:12,0:12:33.11:0,33,616	./.	0/0:22,0:22:11.91:0,12,1319	./.	./.	1/1:1,1:2:3.48:37,3,0	0/0:13,0:13:26.67:0,27,857	0/0:13,0:13:27.93:0,28,598	./.	./.	0/0:4,0:4:12.04:0,12,335	1/1:3,0:3:0.90:3,1,0	./.	./.	./.	0/0:7,0:6:15.15:0,15,332	./.	./.	./.	./.	./.	0/1:1,2:3:28.11:81,0,28
chr10	41562065	.	A	AG	50.21	PASS	AC=8;AF=0.308;AN=26;BaseQRankSum=2.787;DP=302;FS=0.000;HRun=0;HaplotypeScore=25.4634;InbreedingCoeff=0.3857;MQ=10.51;MQ0=267;MQRankSum=-1.654;QD=2.09;ReadPosRankSum=0.898;VQSLOD=1.0191;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	0/0:12,0:6:15.05:0,15,209	./.	./.	./.	0/0:16,0:3:3.01:0,3,42	0/0:24,0:3:6.02:0,6,83	./.	./.	1/1:9,1:1:3.01:39,3,0	./.	0/0:12,0:4:2.93:0,3,42	./.	./.	1/1:4,1:1:3.01:36,3,0	./.	./.	./.	0/0:11,0:3:3.01:0,3,41	./.	./.	0/0:11,0:5:8.99:0,9,103	1/1:6,1:1:3.01:33,3,0	0/0:9,1:1:1.82:0,2,5	./.	0/0:9,0:1:3.01:0,3,38	0/0:11,0:2:3.01:0,3,42	1/1:1,1:1:3.01:39,3,0
chr10	41562091	.	GGC	G	189.09	PASS	AB=0.984;AC=17;AF=0.531;AN=32;BaseQRankSum=4.800;DP=279;FS=0.000;HRun=0;HaplotypeScore=36.2349;InbreedingCoeff=0.2131;MQ=13.62;MQ0=225;MQRankSum=-1.600;QD=2.01;ReadPosRankSum=-1.385;VQSLOD=1.1620;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/1:13,0:8:6.58:7,0,343	./.	./.	1/1:8,3:3:9:80,9,0	0/0:20,0:4:9.03:0,9,182	0/0:20,0:5:12.04:0,12,218	./.	0/0:14,0:2:6.02:0,6,97	1/1:10,0:1:3.01:33,3,0	./.	0/0:6,0:3:2.97:0,3,20	./.	1/1:4,1:1:3:27,3,0	1/1:5,0:1:3.01:33,3,0	./.	./.	./.	0/1:12,0:6:21.95:22,0,76	./.	./.	0/1:19,1:11:34.34:34,0,283	1/1:6,0:1:2.98:22,3,0	1/1:7,0:1:2.98:21,3,0	./.	0/0:7,0:1:3.01:0,3,30	0/0:6,0:2:3.01:0,3,30	1/1:5,0:1:3:29,3,0
chr10	41562093	.	C	CAG	216.50	PASS	AB=0.857;AC=17;AF=0.531;AN=32;BaseQRankSum=3.464;DP=288;FS=0.000;HRun=0;HaplotypeScore=48.4164;InbreedingCoeff=0.3036;MQ=14.38;MQ0=225;MQRankSum=-0.921;QD=2.02;ReadPosRankSum=-1.769;VQSLOD=1.1135;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:13,0:8:3.99:0,4,222	./.	./.	1/1:13,0:5:8.30:26,8,0	0/1:22,0:6:3.21:3,0,106	0/0:20,0:5:9.03:0,9,119	./.	0/0:15,0:3:6.02:0,6,75	1/1:2,8:1:2.88:15,3,0	./.	0/0:1,5:3:0:0,0,0	./.	1/1:5,0:1:2.22:7,2,0	0/1:1,3:1:0:0,0,0	./.	./.	./.	1/1:7,7:7:9.02:129,9,0	./.	./.	0/1:21,0:13:21.95:22,0,176	0/0:2,3:1:0:0,0,0	0/0:2,6:2:2.04:0,2,6	./.	1/1:1,6:1:3.01:52,3,0	1/1:0,6:2:3.01:52,3,0	1/1:1,4:1:2.90:16,3,0
chr10	41562226	.	GA	G	775.87	PASS	AB=0.917;AC=21;AF=0.457;AN=46;BaseQRankSum=4.970;DP=269;FS=0.000;HRun=1;HaplotypeScore=70.6208;InbreedingCoeff=0.5182;MQ=22.13;MQ0=92;MQRankSum=0.497;QD=6.21;ReadPosRankSum=0.846;VQSLOD=0.3819;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,3:6:15.35:128,15,0	0/0:12,0:8:11.86:0,12,145	./.	./.	0/0:9,0:7:0:0,0,0	0/0:24,0:19:22.93:0,23,183	0/1:16,0:9:0.05:0,0,0	0/0:6,0:2:6.02:0,6,84	0/0:21,0:12:2.99:0,3,38	0/1:6,3:8:15.98:111,0,16	1/1:3,0:1:0.47:1,0,0	./.	0/0:16,0:11:21.54:0,22,272	0/0:4,0:3:3.01:0,3,44	1/1:2,2:2:5.99:60,6,0	./.	0/0:13,0:4:6.02:0,6,71	0/0:9,0:3:3.77:0,4,43	1/1:3,3:4:11.40:120,11,0	0/0:7,2:4:2.78:0,3,18	1/1:15,1:8:5.91:68,6,0	0/0:11,0:10:0.89:0,1,3	1/1:1,5:6:5.56:70,6,0	0/1:20,0:5:0.01:0,0,0	1/1:2,5:6:17.92:160,18,0	1/1:4,4:5:7.59:144,8,0	./.	1/1:18,1:7:5.97:58,6,0
chr10	41562234	.	GA	G	292.90	PASS	AB=0.785;AC=20;AF=0.417;AN=48;BaseQRankSum=3.432;DP=260;FS=2.660;HRun=1;HaplotypeScore=70.1674;InbreedingCoeff=0.3411;MQ=22.27;MQ0=89;MQRankSum=0.828;QD=2.52;ReadPosRankSum=0.474;VQSLOD=-0.6238;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:7,3:6:3.49:8,0,3	0/0:11,0:8:12.47:0,12,125	./.	./.	0/0:11,0:8:0.47:0,0,1	0/0:26,0:21:22.22:0,22,167	0/0:15,0:8:2.90:0,3,16	0/0:5,0:1:2.84:0,3,14	0/0:18,0:11:1.57:0,2,34	0/1:5,3:7:7.57:84,0,8	1/1:3,0:1:0.47:1,0,0	./.	0/0:16,0:11:23.72:0,24,210	0/0:4,0:3:3.01:0,3,31	1/1:2,2:2:2.70:7,3,0	./.	0/0:12,0:3:5.95:0,6,54	0/0:9,0:2:2.74:0,3,12	1/1:2,3:3:9.03:102,9,0	1/1:7,2:4:0.43:1,0,0	1/1:13,1:7:0.37:1,0,0	0/0:8,0:7:0.47:0,0,2	1/1:6,3:9:1.30:4,1,0	0/1:19,0:5:0:0,0,0	0/1:4,5:8:7.20:28,0,7	1/1:4,4:5:11.07:135,11,0	0/0:4,0:1:2.80:0,3,13	1/1:18,0:7:5.91:45,6,0
chr10	41562236	.	GGA	G	405.92	PASS	AB=0.902;AC=21;AF=0.477;AN=44;BaseQRankSum=-1.836;DP=244;FS=2.167;HRun=0;HaplotypeScore=66.7261;InbreedingCoeff=0.2109;MQ=22.38;MQ0=85;MQRankSum=-0.931;QD=2.98;ReadPosRankSum=5.923;VQSLOD=0.6249;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:6,3:6:8.26:0,8,28	0/1:8,2:7:30.39:30,0,39	./.	./.	1/1:10,0:7:0.44:1,0,0	0/1:26,1:22:12.10:12,0,88	0/0:14,0:7:5.94:0,6,41	./.	0/0:9,9:11:5.01:0,5,38	1/1:6,2:7:14.69:134,15,0	0/0:2,1:1:0.47:0,0,1	./.	0/1:9,6:10:53.72:105,0,54	1/1:3,1:3:2.82:22,3,0	0/0:4,0:2:0.72:0,1,6	./.	0/1:12,0:3:28.29:31,0,28	1/1:8,2:3:7.80:68,8,0	1/1:5,0:3:5.45:14,5,0	0/0:7,1:3:2.67:0,3,6	0/0:6,4:5:3.76:0,4,17	0/0:7,1:7:4.16:0,4,21	0/0:8,0:8:5.14:0,5,13	./.	0/1:8,0:7:0.82:1,0,21	1/1:7,0:4:5.91:16,6,0	1/1:4,0:1:3.01:38,3,0	1/1:14,2:7:6.01:66,6,0
chr10	41562238	.	A	AG	527.17	PASS	AB=0.889;AC=23;AF=0.523;AN=44;BaseQRankSum=2.141;DP=256;FS=0.000;HRun=2;HaplotypeScore=72.9623;InbreedingCoeff=0.5665;MQ=22.65;MQ0=85;MQRankSum=-1.273;QD=4.84;ReadPosRankSum=0.248;VQSLOD=0.3757;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,0:6:12.50:75,13,0	0/0:12,0:8:13.48:0,13,113	./.	./.	1/1:10,0:7:0.18:0,0,0	0/0:26,0:22:25.92:0,26,193	0/0:15,0:8:5.86:0,6,38	./.	0/0:18,0:11:4.53:0,5,45	1/1:9,0:8:12.57:119,13,0	0/1:5,0:3:0:0,0,0	./.	0/0:18,0:11:16.83:0,17,154	0/0:4,0:3:2.88:0,3,16	1/1:4,0:2:5.93:40,6,0	./.	0/0:12,0:3:3.48:0,3,41	1/1:11,0:4:2.44:6,2,0	1/1:5,0:3:9.03:110,9,0	0/0:9,0:4:3.06:0,3,7	1/1:10,0:5:5.70:28,6,0	0/0:8,0:7:3.83:0,4,15	0/1:4,4:8:0.27:22,0,0	./.	1/1:6,2:7:9.34:70,9,0	1/1:8,0:5:13.28:152,13,0	0/1:5,0:2:0:0,0,0	1/1:16,1:8:2.13:46,2,0
chr10	41562381	.	A	AG	3824.98	PASS	AC=32;AF=0.593;AN=54;BaseQRankSum=9.266;DP=613;FS=35.737;HRun=3;HaplotypeScore=104.3140;InbreedingCoeff=0.9186;MQ=68.48;MQ0=12;MQRankSum=-12.608;QD=21.73;ReadPosRankSum=-3.534;VQSLOD=0.8109;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,10:8:18.02:229,18,0	0/0:18,0:18:48.15:0,48,576	0/0:55,0:48:99:0,120,1434	0/0:47,0:45:99:0,114,1331	0/0:22,0:22:57.17:0,57,681	0/0:49,0:49:99:0,129,1545	0/0:62,0:62:99:0,165,1953	1/1:9,15:23:57.08:722,57,0	0/0:44,0:43:99:0,108,1279	1/1:0,11:10:30.09:404,30,0	1/1:2,8:5:9.03:126,9,0	1/1:0,10:8:24.04:313,24,0	0/0:46,0:45:99:0,123,1444	0/0:20,0:20:54.16:0,54,647	1/1:2,9:8:15.05:209,15,0	1/1:1,7:6:9.03:126,9,0	0/0:22,0:20:57.17:0,57,677	1/1:5,3:6:6.02:84,6,0	1/1:4,11:13:24.08:336,24,0	1/1:5,7:8:6.02:84,6,0	1/1:4,7:10:18.02:230,18,0	0/0:50,0:50:99:0,132,1567	1/1:1,5:5:12.04:167,12,0	1/1:0,5:3:5.98:62,6,0	1/1:0,9:4:9.03:126,9,0	1/1:1,11:8:24.07:314,24,0	1/1:2,8:10:21.07:293,21,0	./.
chr10	41562439	.	CTGCACTCTG	C	9799.89	PASS	AB=0.584;AC=33;AF=0.589;AN=56;BaseQRankSum=14.699;DP=596;FS=56.242;HRun=0;HaplotypeScore=188.3707;InbreedingCoeff=0.6629;MQ=74.54;MQ0=0;MQRankSum=-13.299;QD=45.58;ReadPosRankSum=1.676;VQSLOD=2.1838;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,32:34:35.58:1079,36,0	0/0:13,0:12:36.12:0,36,1670	0/0:43,0:40:92.47:0,92,3576	0/0:46,0:42:99:0,101,4324	0/0:22,0:22:44.23:0,44,1952	0/0:41,0:41:99:0,102,4790	0/0:45,0:45:99:0,129,5702	0/1:7,19:24:99:1063,0,289	0/0:53,0:53:99:0,153,6763	1/1:1,5:5:12.04:367,12,0	1/1:0,4:4:3.01:92,3,0	1/1:0,15:15:39.13:1194,39,0	0/0:44,0:44:99:0,129,6160	0/0:35,0:35:99:0,99,4581	1/1:2,10:12:27.05:755,27,0	1/1:1,12:13:27.09:826,27,0	0/1:5,17:22:99:793,0,234	1/1:2,7:9:15.03:390,15,0	0/1:5,9:14:63.20:741,0,63	1/1:0,3:3:9.03:275,9,0	1/1:4,11:15:5.77:112,6,0	0/0:39,0:39:93.30:0,93,4327	1/1:1,5:5:9.03:275,9,0	1/1:2,8:10:6.02:183,6,0	1/1:1,6:5:6.02:184,6,0	1/1:2,11:12:33.11:1010,33,0	1/1:0,4:4:12.04:367,12,0	1/1:0,1:1:3.01:92,3,0
chr10	41562691	.	GTT	G	9900.89	PASS	AB=0.533;AC=33;AF=0.589;AN=56;BaseQRankSum=18.590;DP=708;FS=2.064;HRun=6;HaplotypeScore=131.1475;InbreedingCoeff=0.9278;MQ=79.87;MQ0=3;MQRankSum=-10.840;QD=31.04;ReadPosRankSum=5.728;VQSLOD=3.4996;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,36:37:84.27:1115,84,0	0/0:24,0:24:72.25:0,72,1284	0/0:41,0:41:99:0,105,1681	0/0:28,0:27:68.93:0,69,1048	0/0:26,0:26:72.25:0,72,1272	0/0:41,0:41:99:0,117,2071	0/0:41,0:41:99:0,114,2040	1/1:4,12:13:27.08:360,27,0	0/0:49,0:49:99:0,141,2422	1/1:2,18:18:48.16:640,48,0	1/1:2,12:12:24.07:310,24,0	1/1:3,17:19:39.12:520,39,0	0/0:42,0:42:99:0,120,2145	0/0:30,0:30:84.29:0,84,1506	1/1:3,20:22:57.18:760,57,0	0/1:2,14:15:11.91:478,0,12	0/0:19,0:18:51.17:0,51,912	1/1:0,16:16:48.16:640,48,0	1/1:3,8:11:27.09:359,27,0	1/1:0,21:19:48.16:639,48,0	1/1:0,12:12:36.12:480,36,0	0/0:46,0:46:99:0,138,2410	1/1:1,14:15:39.13:520,39,0	1/1:0,18:18:38.76:520,39,0	1/1:0,20:20:45.10:576,45,0	1/1:3,21:23:60.19:800,60,0	1/1:0,26:26:75.25:1000,75,0	1/1:0,10:10:15.01:181,15,0
chr10	41562831	.	G	GC	10457.26	PASS	AB=0.541;AC=35;AF=0.625;AN=56;BaseQRankSum=8.167;DP=694;FS=6.346;HRun=1;HaplotypeScore=86.1389;InbreedingCoeff=0.8757;MQ=48.88;MQ0=19;MQRankSum=-19.729;QD=32.88;ReadPosRankSum=-4.164;VQSLOD=3.0297;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,22:27:41.97:528,42,0	0/0:16,0:16:48.14:0,48,602	0/0:39,0:8:21.06:0,21,262	0/0:25,0:4:6.02:0,6,78	0/0:34,0:34:99:0,99,1284	0/0:32,0:32:96.31:0,96,1247	0/0:44,0:44:99:0,129,1675	1/1:5,17:22:63.21:938,63,0	0/0:57,0:57:99:0,166,2143	1/1:3,26:29:78.24:1119,78,0	1/1:1,13:14:33.11:492,33,0	1/1:0,16:16:48.16:718,48,0	0/0:52,0:52:99:0,150,1920	0/0:33,0:33:99:0,99,1285	1/1:1,25:25:69.23:1031,69,0	0/1:3,17:18:65.67:552,0,66	1/1:7,25:32:27.09:400,27,0	1/1:0,3:2:6.02:90,6,0	1/1:0,17:17:48.16:718,48,0	1/1:2,10:12:27.09:404,27,0	1/1:1,5:5:5.98:65,6,0	0/0:44,0:44:99:0,129,1675	1/1:0,15:15:33.11:493,33,0	1/1:2,9:11:18.02:244,18,0	1/1:1,14:15:36.12:538,36,0	1/1:1,22:23:63.21:942,63,0	1/1:1,21:22:60.16:872,60,0	1/1:0,7:7:21.07:314,21,0
chr10	41563481	.	ACCC	A	1001.95	PASS	AB=0.852;AC=7;AF=0.125;AN=56;BaseQRankSum=8.480;DP=854;FS=89.796;HRun=3;HaplotypeScore=236.6023;InbreedingCoeff=-0.1443;MQ=92.33;MQ0=7;MQRankSum=-7.853;QD=5.63;ReadPosRankSum=3.038;VQSLOD=-0.7299;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,105,2297	0/0:16,0:16:48.16:0,48,1152	0/0:43,0:43:99:0,129,3143	0/0:49,0:49:99:0,141,3046	0/0:28,0:28:84.29:0,84,2038	0/0:48,0:48:99:0,144,3447	0/0:29,0:29:87.30:0,87,2114	0/1:23,2:19:54.31:54,0,1061	0/0:62,0:62:99:0,187,4505	0/0:30,2:30:58.38:0,58,1828	0/0:22,0:19:48.16:0,48,996	0/1:18,4:20:99:110,0,882	0/0:56,0:56:99:0,169,4054	0/0:26,0:26:78.27:0,78,1861	0/1:33,5:30:99:187,0,1455	0/0:20,0:20:57.20:0,57,1371	0/0:50,0:47:99:0,138,3397	0/1:10,2:12:75.35:75,0,550	0/1:16,7:21:99:319,0,799	0/0:34,0:27:81.26:0,81,1587	0/0:13,0:12:27.09:0,27,564	0/0:43,0:43:99:0,129,3125	0/0:21,0:18:51.17:0,51,1017	0/0:19,1:19:30.15:0,30,555	0/0:19,1:16:48.16:0,48,969	0/1:23,6:26:99:289,0,1116	0/1:24,5:24:97.74:98,0,1204	0/0:7,0:4:12.04:0,12,251
chr10	41563486	.	T	TA	9429.72	PASS	AB=0.605;AC=25;AF=0.446;AN=56;BaseQRankSum=16.667;DP=855;FS=19.729;HRun=1;HaplotypeScore=180.2211;InbreedingCoeff=0.6579;MQ=91.84;MQ0=10;MQRankSum=-13.313;QD=27.41;ReadPosRankSum=1.534;VQSLOD=2.7241;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,99,1245	0/0:17,0:17:45.15:0,45,583	0/0:38,0:38:99:0,104,1218	0/0:51,0:51:99:0,139,1626	0/0:29,0:29:81.26:0,81,1051	0/0:46,0:46:99:0,135,1710	0/0:33,0:33:90.21:0,90,1104	0/1:10,18:19:46.37:423,0,46	0/0:61,0:61:99:0,184,2359	1/1:10,21:27:64.46:1076,64,0	1/1:1,21:19:42.14:627,42,0	0/1:4,17:19:0.64:618,0,1	0/0:59,0:59:99:0,172,2190	0/0:25,0:25:75.22:0,75,945	1/1:6,32:30:14:1038,14,0	0/0:18,0:18:51.16:0,51,656	0/0:53,0:50:99:0,129,1814	0/1:4,7:11:6.09:362,0,6	0/1:10,15:22:48.35:530,0,48	1/1:3,29:25:75.25:1114,75,0	1/1:1,12:12:33.11:475,33,0	0/0:45,0:45:99:0,129,1660	1/1:3,17:17:45.13:632,45,0	1/1:1,19:19:30.09:447,30,0	1/1:3,18:16:48.13:677,48,0	0/1:11,16:22:56.07:524,0,56	1/1:6,22:21:3.56:706,4,0	1/1:0,7:4:12.04:179,12,0
chr10	41563504	.	AACTAT	A	10527.74	PASS	AB=0.667;AC=29;AF=0.518;AN=56;BaseQRankSum=19.590;DP=813;FS=1.007;HRun=0;HaplotypeScore=211.5949;InbreedingCoeff=0.9267;MQ=86.33;MQ0=19;MQRankSum=-17.621;QD=36.30;ReadPosRankSum=3.722;VQSLOD=4.6100;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:84.29:0,84,2494	0/0:15,0:15:45.15:0,45,1427	0/0:45,0:44:99:0,132,3813	0/0:52,0:51:99:0,147,3937	0/0:29,0:29:84.29:0,84,2665	0/0:50,0:50:99:0,141,4302	0/0:32,0:32:93.28:0,93,2609	1/1:5,17:10:21.07:419,21,0	0/0:62,0:62:99:0,187,5272	1/1:6,19:19:51.15:984,51,0	1/1:5,10:10:15.01:279,15,0	1/1:3,17:17:45.14:933,45,0	0/0:66,0:66:99:0,190,5591	0/0:22,0:22:66.23:0,66,1946	1/1:3,33:27:75.21:1537,75,0	0/0:19,0:19:54.19:0,54,1665	0/0:50,0:46:99:0,132,3933	0/1:5,5:10:11.79:370,0,12	1/1:3,12:11:27.06:541,27,0	1/1:2,27:21:57.16:1185,57,0	1/1:3,5:8:15.05:324,15,0	0/0:48,0:48:99:0,141,4111	1/1:0,13:9:24.08:518,24,0	1/1:8,10:17:23.96:457,24,0	1/1:0,17:11:30.10:648,30,0	1/1:4,23:21:60.16:1184,60,0	1/1:5,19:16:45.13:868,45,0	1/1:5,6:8:20.93:282,21,0
chr10	41563673	.	ATATTATATT	A	1540.01	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=2.872;DP=756;FS=0.000;HRun=0;HaplotypeScore=201.4509;InbreedingCoeff=0.9690;MQ=49.77;MQ0=49;MQRankSum=-5.965;QD=40.53;ReadPosRankSum=-0.151;VQSLOD=3.0157;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,13:14:23.41:619,23,0	0/0:12,0:12:36.12:0,36,1555	0/0:20,0:4:9.02:0,9,254	0/0:22,0:14:33.11:0,33,995	0/0:29,0:29:69.22:0,69,3133	0/0:46,0:46:99:0,132,5997	0/0:17,0:16:42.14:0,42,1575	0/0:37,0:28:84.26:0,84,3503	0/0:47,0:47:99:0,123,5484	0/0:31,0:28:78.25:0,78,3547	0/0:33,0:31:72.18:0,72,2765	0/0:23,0:16:39:0,39,1672	0/0:30,0:30:77.87:0,78,3575	0/0:13,0:12:33.11:0,33,1599	0/0:29,0:26:66.23:0,66,3192	1/1:4,17:21:33.58:1042,34,0	0/0:18,0:17:51.18:0,51,2379	0/0:18,0:16:36.06:0,36,1606	0/0:35,0:21:54.19:0,54,2425	0/0:42,0:35:99:0,102,4458	0/0:20,0:19:51.18:0,51,2259	0/0:31,0:31:75.24:0,75,3313	0/0:24,0:23:63.08:0,63,2564	0/0:23,0:22:45.01:0,45,1589	0/0:27,0:26:75.26:0,75,3353	0/0:31,0:27:78.27:0,78,3590	0/0:42,0:33:87.27:0,87,3740	0/0:18,0:18:42.14:0,42,1994
chr10	41563864	.	GTATT	G	1361.35	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-0.818;DP=680;FS=4.892;HRun=0;HaplotypeScore=150.7976;InbreedingCoeff=0.9720;MQ=61.46;MQ0=3;MQRankSum=0.481;QD=38.90;ReadPosRankSum=1.312;VQSLOD=3.7262;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,12:14:30.10:530,30,0	0/0:17,0:17:45.15:0,45,1092	0/0:24,0:23:39.06:0,39,730	0/0:18,0:18:21.07:0,21,501	0/0:22,0:22:66.23:0,66,1621	0/0:51,0:51:99:0,141,3357	0/0:26,0:26:69.17:0,69,1527	0/0:29,0:29:78.11:0,78,879	0/0:45,0:45:99:0,126,2994	0/0:25,0:25:69.21:0,69,830	0/0:23,0:21:60.16:0,60,709	0/0:26,0:25:63.17:0,63,732	0/0:27,0:27:69.24:0,69,1737	0/0:20,0:20:54.18:0,54,1313	0/0:26,0:26:72.21:0,72,854	1/1:0,21:20:53.98:953,54,0	0/0:14,0:14:36.12:0,36,869	0/0:6,0:6:11.72:0,12,140	0/0:15,0:15:30.08:0,30,345	0/0:25,0:22:63.15:0,63,731	0/0:15,0:15:27.08:0,27,353	0/0:42,0:42:99:0,111,2673	0/0:26,0:24:57.17:0,57,716	0/0:21,0:21:45.14:0,45,566	0/0:16,0:16:42.13:0,42,498	0/0:36,0:34:93.28:0,93,1142	0/0:35,0:34:90.23:0,90,1069	0/0:15,0:13:14.88:0,15,178
chr10	41563874	.	AT	A	8217.38	PASS	AB=1.000;AC=32;AF=0.571;AN=56;BaseQRankSum=15.852;DP=670;FS=1.002;HRun=7;HaplotypeScore=85.7954;InbreedingCoeff=0.8725;MQ=68.45;MQ0=0;MQRankSum=-3.473;QD=22.70;ReadPosRankSum=3.411;VQSLOD=4.9777;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:14,0:14:3.63:4,0,57	0/0:20,0:20:54.17:0,54,677	0/0:23,0:22:44.89:0,45,474	0/0:12,0:12:30.06:0,30,357	0/0:27,0:27:75.23:0,75,928	0/0:52,0:52:99:0,135,1656	0/0:25,0:25:66.21:0,66,827	1/1:5,25:30:75.16:759,75,0	0/0:47,0:47:99:0,126,1571	1/1:1,23:24:66.15:674,66,0	1/1:3,22:23:57.12:581,57,0	1/1:3,23:26:57.13:581,57,0	0/0:28,0:28:84.25:0,84,1027	0/0:18,0:18:48.14:0,48,591	1/1:2,24:26:72.16:734,72,0	0/1:22,0:21:14.37:14,0,18	0/0:16,0:16:45.14:0,45,559	1/1:3,2:5:11.99:111,12,0	1/1:1,14:15:42.08:422,42,0	1/1:3,25:27:55.29:713,55,0	1/1:6,9:15:18.04:184,18,0	0/0:40,0:40:99:0,114,1433	1/1:2,22:22:54.12:551,54,0	1/1:2,17:19:42.09:428,42,0	1/1:0,16:16:42.10:428,42,0	1/1:4,29:32:87.17:875,87,0	1/1:1,34:35:99:1003,99,0	1/1:0,5:5:15.03:153,15,0
chr10	41564175	.	GT	G	13793.27	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=19.494;DP=891;FS=2.726;HRun=2;HaplotypeScore=125.3233;InbreedingCoeff=0.9967;MQ=80.04;MQ0=0;MQRankSum=0.022;QD=35.73;ReadPosRankSum=3.411;VQSLOD=4.5021;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,102,1445	0/0:30,0:30:90.28:0,90,1310	0/0:53,1:53:99:0,101,1773	0/0:36,0:36:89.36:0,89,1256	0/0:38,0:38:99:0,114,1688	0/0:54,0:54:99:0,156,2278	0/0:38,0:38:99:0,114,1628	1/1:0,39:37:99:1289,111,0	0/0:51,0:51:99:0,150,2161	1/1:1,38:39:99:1448,114,0	1/1:1,18:19:57.16:724,57,0	1/1:1,32:33:93.30:1205,93,0	0/0:47,0:47:99:0,141,2073	0/0:30,0:30:90.26:0,90,1284	1/1:0,28:28:69.22:895,69,0	0/0:19,0:19:57.17:0,57,813	0/0:14,0:14:42.14:0,42,628	1/1:1,7:8:18.06:234,18,0	1/1:1,22:22:60.14:734,60,0	1/1:0,27:27:81.18:1028,81,0	1/1:0,30:30:87.28:1129,87,0	0/0:58,0:58:99:0,172,2543	1/1:0,28:28:78.25:1011,78,0	1/1:0,20:20:57.19:740,57,0	1/1:1,26:27:75.20:954,75,0	1/1:0,29:29:81.02:1008,81,0	1/1:0,31:31:93.30:1202,93,0	1/1:0,5:5:15.05:195,15,0
chr10	41565305	.	GAATAAATA	G	3039.64	PASS	AB=0.681;AC=31;AF=0.674;AN=46;BaseQRankSum=0.368;DP=322;FS=6.824;HRun=0;HaplotypeScore=135.7310;InbreedingCoeff=0.1540;MQ=60.19;MQ0=2;MQRankSum=-7.665;QD=13.27;ReadPosRankSum=1.196;VQSLOD=2.2899;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:10:15.04:0,15,202	0/1:1,5:7:89.86:288,0,90	./.	0/0:15,0:9:0:0,0,0	0/1:13,1:19:33.29:33,0,119	0/1:14,14:38:99:901,0,334	0/0:2,0:5:8.99:0,9,76	./.	0/1:8,4:16:99:206,0,399	1/1:13,0:13:6.02:108,6,0	1/1:12,0:12:3.01:50,3,0	1/1:5,0:5:3.01:54,3,0	0/1:2,7:13:99:352,0,392	0/0:1,0:4:5.99:0,6,49	1/1:8,0:8:3.01:48,3,0	0/0:4,0:6:5.99:0,6,49	1/1:11,6:17:9.03:162,9,0	1/1:9,0:9:3.01:42,3,0	1/1:10,0:10:3.01:54,3,0	1/1:13,0:13:9.03:158,9,0	./.	1/1:6,1:7:3.01:76,3,0	./.	./.	1/1:13,0:13:18.06:325,18,0	1/1:11,0:11:9.03:162,9,0	1/1:16,0:16:6.02:108,6,0	1/1:2,0:2:3.01:54,3,0
chr10	41565316	.	TAA	T	1124.77	PASS	AB=1.000;AC=37;AF=0.685;AN=54;BaseQRankSum=7.380;DP=250;FS=7.479;HRun=3;HaplotypeScore=88.2152;InbreedingCoeff=0.3490;MQ=54.65;MQ0=2;MQRankSum=-3.599;QD=6.32;ReadPosRankSum=6.069;VQSLOD=-0.1309;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:38.49:0,38,444	0/1:8,0:8:10.44:10,0,122	0/0:7,0:3:6.02:0,6,86	0/0:11,0:6:6:0,6,53	0/0:10,0:10:6.67:0,7,195	0/1:36,0:36:80.55:81,0,267	0/1:5,0:5:2.59:3,0,40	1/1:22,0:22:3.01:43,3,0	0/0:12,0:12:7.18:0,7,270	1/1:10,2:12:6.02:74,6,0	1/1:9,1:10:9.01:97,9,0	1/1:3,1:4:3.01:37,3,0	0/1:11,0:11:16.13:16,0,132	0/1:4,0:4:2.59:3,0,37	1/1:2,1:3:3.01:31,3,0	1/1:2,0:2:3.11:9,3,0	0/0:16,0:16:30.34:0,30,430	1/1:5,1:6:6:51,6,0	1/1:4,1:5:6.01:64,6,0	1/1:7,3:10:12.03:135,12,0	./.	1/1:3,0:3:2.37:8,2,0	1/1:4,0:4:5.99:49,6,0	1/1:0,1:1:3:26,3,0	1/1:4,6:10:18.06:222,18,0	1/1:7,3:10:12.04:154,12,0	1/1:8,2:10:12.02:141,12,0	1/1:1,1:2:3.01:37,3,0
chr10	41565317	.	A	AT	803.50	PASS	AC=28;AF=0.519;AN=54;BaseQRankSum=6.452;DP=174;FS=0.736;HRun=1;HaplotypeScore=71.4916;InbreedingCoeff=0.7057;MQ=61.33;MQ0=2;MQRankSum=-2.414;QD=23.63;ReadPosRankSum=1.835;VQSLOD=3.7098;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:44.98:0,45,527	0/0:9,0:9:20.15:0,20,155	0/0:7,0:3:6.02:0,6,84	0/0:10,0:5:5.97:0,6,46	0/0:10,0:10:29.66:0,30,291	0/0:37,0:37:99:0,101,725	0/0:5,0:5:8.82:0,9,75	1/1:0,1:1:3.01:44,3,0	0/0:13,0:13:32.22:0,32,269	1/1:2,0:2:6:54,6,0	1/1:2,1:3:8.98:90,9,0	1/1:1,0:1:3:27,3,0	0/0:11,0:11:25.70:0,26,158	0/0:4,0:4:8.82:0,9,73	1/1:1,0:1:2.94:18,3,0	0/0:2,0:2:5.81:0,6,31	0/0:16,0:16:38.82:0,39,470	1/1:2,0:2:5.89:62,6,0	1/1:2,0:2:6.01:55,6,0	1/1:3,1:4:11.98:120,12,0	./.	0/0:1,0:1:2.74:0,3,12	1/1:2,0:2:5.99:49,6,0	1/1:1,0:1:3.01:48,3,0	1/1:6,0:6:17.99:156,18,0	1/1:4,0:4:12.02:125,12,0	1/1:3,1:4:12:121,12,0	1/1:1,0:1:3:25,3,0
chr10	41565320	.	TA	T	67.25	PASS	AC=28;AF=0.538;AN=52;BaseQRankSum=8.284;DP=167;FS=5.424;HRun=3;HaplotypeScore=74.9896;InbreedingCoeff=0.5851;MQ=58.19;MQ0=2;MQRankSum=-6.047;QD=2.32;ReadPosRankSum=6.350;VQSLOD=-0.5136;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:39.22:0,39,418	0/0:9,0:9:11.02:0,11,157	0/0:6,0:2:2.97:0,3,20	0/0:9,0:4:2.99:0,3,23	0/0:9,0:9:16.91:0,17,193	0/0:38,0:38:26.83:0,27,405	0/0:5,0:5:6.96:0,7,81	1/1:1,0:1:0.47:1,0,0	0/0:11,0:11:17.94:0,18,214	1/1:0,2:2:5.27:22,5,0	1/1:1,1:2:2.92:7,3,0	1/1:0,1:1:2.68:11,3,0	0/0:13,0:13:12.80:0,13,151	0/0:4,0:4:0.94:0,1,2	1/1:0,1:1:1.25:3,1,0	0/0:2,0:2:0.94:0,1,2	0/0:16,0:16:31.97:0,32,383	1/1:1,1:2:0.63:3,1,0	1/1:0,1:1:2.74:12,3,0	1/1:1,3:4:8.46:29,8,0	./.	1/1:1,0:1:0.89:2,1,0	./.	1/1:0,1:1:1.25:3,1,0	1/1:0,6:6:15.74:62,16,0	1/1:0,3:3:8.04:33,8,0	1/1:1,2:3:5.71:22,6,0	1/1:0,1:1:2.60:10,3,0
chr10	41565324	.	TAAATAAATAAATAAATAAATG	T	3670.66	PASS	AB=0.829;AC=24;AF=0.444;AN=54;BaseQRankSum=9.558;DP=194;FS=4.998;HRun=0;HaplotypeScore=149.2807;InbreedingCoeff=0.5353;MQ=48.17;MQ0=2;MQRankSum=-6.728;QD=66.74;ReadPosRankSum=1.206;VQSLOD=3.3228;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:15:42.14:0,42,1882	0/0:9,0:9:27.09:0,27,1155	0/0:4,0:1:3:0,3,29	0/0:5,0:2:3.01:0,3,45	0/0:9,0:9:27.09:0,27,1375	0/0:37,0:37:99:0,108,5435	0/0:7,0:7:18.06:0,18,779	1/1:5,0:5:5.40:12,5,0	0/0:12,0:12:33.11:0,33,1962	1/1:3,2:5:6.96:335,7,0	1/1:1,1:2:5.23:170,5,0	1/1:0,1:1:3.01:167,3,0	0/0:14,0:14:36.12:0,36,2050	0/0:3,0:3:6.02:0,6,417	1/1:0,1:1:3.01:160,3,0	0/0:2,0:2:6.02:0,6,417	0/0:16,0:16:33.32:0,33,780	0/1:5,1:6:78.42:150,0,78	0/1:3,1:4:30.66:164,0,31	1/1:3,3:6:2.44:484,2,0	./.	0/0:2,0:2:6.02:0,6,200	0/0:1,0:1:1.55:0,2,4	1/1:1,1:2:2.92:17,3,0	1/1:2,6:8:14.90:994,15,0	1/1:6,3:9:14.13:513,14,0	1/1:2,2:4:9.13:340,9,0	1/1:1,1:2:1.95:164,2,0
chr10	41565351	.	T	TATTA	8633.11	PASS	AC=32;AF=0.593;AN=54;BaseQRankSum=6.519;DP=363;FS=14.594;HRun=0;HaplotypeScore=124.2247;InbreedingCoeff=0.8864;MQ=64.70;MQ0=0;MQRankSum=-10.077;QD=49.33;ReadPosRankSum=1.280;VQSLOD=5.0585;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,18:21:51.15:1193,51,0	0/0:16,0:16:39.10:0,39,639	0/0:8,0:8:12.03:0,12,178	0/0:3,0:4:6.02:0,6,101	0/0:16,0:16:45.15:0,45,801	0/0:44,0:44:99:0,123,2218	0/0:14,0:14:39.10:0,39,639	1/1:0,19:20:60.19:1464,60,0	0/0:20,0:20:57.19:0,57,1021	1/1:2,8:13:36.07:648,36,0	1/1:2,5:7:15.05:365,15,0	1/1:1,2:4:6.02:120,6,0	0/0:24,0:24:57.18:0,57,1021	0/0:6,0:6:15:0,15,208	1/1:5,2:7:21.05:415,21,0	1/1:2,4:7:6.02:152,6,0	0/0:20,0:20:36.06:0,36,575	1/1:4,6:9:15.05:388,15,0	1/1:4,7:13:39.11:820,39,0	1/1:3,10:17:27.05:548,27,0	./.	0/0:16,0:16:42.11:0,42,666	1/1:1,2:5:6.02:141,6,0	1/1:2,2:4:3.01:71,3,0	1/1:6,9:16:33.11:628,33,0	1/1:4,13:17:45.11:1013,45,0	1/1:4,8:12:24.08:546,24,0	1/1:1,1:2:6.02:120,6,0
chr10	41565746	.	A	AC	13145.53	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=21.156;DP=762;FS=0.000;HRun=0;HaplotypeScore=148.3905;InbreedingCoeff=0.9854;MQ=85.41;MQ0=2;MQRankSum=-7.910;QD=38.78;ReadPosRankSum=2.520;VQSLOD=4.2569;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:60.18:0,60,821	0/0:10,0:10:30.10:0,30,419	0/0:31,0:31:89.86:0,90,1106	0/0:30,0:30:71.65:0,72,877	0/0:27,0:27:81.27:0,81,1130	0/0:65,0:65:99:0,184,2463	0/0:42,0:42:99:0,120,1595	1/1:2,29:29:78.22:1123,78,0	0/0:44,0:44:99:0,129,1768	1/1:2,33:33:90.31:1398,90,0	1/1:1,29:30:78.07:1144,78,0	1/1:1,19:20:54.18:833,54,0	0/0:41,0:41:99:0,117,1592	0/0:16,0:16:48.15:0,48,656	1/1:1,17:17:48.16:740,48,0	0/0:21,0:21:63.19:0,63,837	0/0:25,0:25:75.22:0,75,999	1/1:1,10:10:30.10:468,30,0	1/1:0,21:21:60.20:937,60,0	1/1:0,32:31:84.28:1287,84,0	1/1:1,10:11:30.10:467,30,0	0/0:50,0:50:99:0,147,2024	1/1:2,30:32:78.04:1187,78,0	1/1:2,17:19:45.15:701,45,0	1/1:1,15:16:39.13:599,39,0	1/1:1,29:29:78.25:1188,78,0	1/1:0,30:30:63.21:979,63,0	1/1:1,2:3:6.02:94,6,0
chr10	41566011	.	G	GA	13765.52	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=18.880;DP=683;FS=1.290;HRun=0;HaplotypeScore=109.2467;InbreedingCoeff=0.9996;MQ=81.49;MQ0=0;MQRankSum=-1.617;QD=42.88;ReadPosRankSum=2.548;VQSLOD=4.6843;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,102,1426	0/0:14,0:14:42.14:0,42,586	0/0:39,0:39:99:0,117,1609	0/0:30,0:30:86.96:0,87,1138	0/0:23,0:23:69.23:0,69,965	0/0:37,0:37:99:0,111,1551	0/0:19,0:19:57.19:0,57,797	1/1:3,25:27:72.23:1119,72,0	0/0:48,0:48:99:0,144,1993	1/1:0,30:31:93.32:1475,93,0	1/1:0,17:17:45.15:719,45,0	1/1:0,18:18:54.18:863,54,0	0/0:36,0:36:99:0,108,1468	0/0:12,0:12:36.12:0,36,504	1/1:0,25:24:63.21:1007,63,0	0/0:21,0:21:63.21:0,63,880	0/0:13,0:13:36.12:0,36,503	1/1:1,14:15:45.15:719,45,0	1/1:0,20:17:39.13:624,39,0	1/1:0,34:34:93.32:1486,93,0	1/1:1,23:24:66.22:1055,66,0	0/0:33,0:33:99:0,99,1344	1/1:0,22:22:63.21:1007,63,0	1/1:0,14:14:36.12:576,36,0	1/1:1,24:25:69.24:1103,69,0	1/1:0,19:19:51.17:813,51,0	1/1:0,21:21:51.17:815,51,0	1/1:0,8:8:24.08:384,24,0
chr10	41566114	.	TTA	T	5401.14	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=9.849;DP=644;FS=0.756;HRun=0;HaplotypeScore=87.2788;InbreedingCoeff=0.9774;MQ=63.02;MQ0=0;MQRankSum=0.464;QD=40.92;ReadPosRankSum=-0.654;VQSLOD=6.4362;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:30:78.27:0,78,1426	0/0:13,0:13:39.13:0,39,719	0/0:11,0:10:27.03:0,27,419	0/0:8,0:7:6.46:0,6,231	0/0:32,0:32:93.32:0,93,1726	0/0:42,0:42:99:0,126,2290	0/0:18,0:18:54.17:0,54,975	1/1:0,28:27:78.23:1134,78,0	0/0:39,0:39:99:0,117,2101	0/0:29,0:28:81.28:0,81,1497	0/0:36,0:36:99:0,108,1979	0/0:15,0:15:45.15:0,45,838	0/0:34,0:34:99:0,99,1832	0/0:18,0:18:54.16:0,54,933	0/0:19,0:19:57.20:0,57,1063	0/0:19,0:19:57.20:0,57,1048	0/0:35,0:35:99:0,105,1923	0/0:18,0:18:54.19:0,54,1006	1/1:0,8:8:24.07:347,24,0	1/1:0,25:25:72.14:1026,72,0	1/1:0,12:12:27.09:413,27,0	0/0:35,0:35:99:0,105,1919	0/0:31,0:31:78.18:0,78,1348	0/0:11,0:11:30.10:0,30,559	0/0:18,0:18:51.17:0,51,951	1/1:1,22:23:13.25:920,13,0	1/1:0,21:21:57.19:872,57,0	1/1:0,15:15:45.15:688,45,0
chr10	41566187	.	TA	T	1102.33	PASS	AB=0.672;AC=2;AF=0.036;AN=56;BaseQRankSum=6.895;DP=735;FS=2.072;HRun=1;HaplotypeScore=94.1285;InbreedingCoeff=-0.0374;MQ=74.60;MQ0=0;MQRankSum=-2.880;QD=13.78;ReadPosRankSum=0.325;VQSLOD=2.8204;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:27,29:56:99:866,0,1098	0/0:21,0:21:63.19:0,63,942	0/0:17,0:17:51.17:0,51,784	0/0:17,1:18:36.37:0,36,646	0/0:43,0:43:99:0,129,1966	0/0:39,0:39:99:0,117,1804	0/0:24,0:24:72.23:0,72,1101	0/0:33,0:33:96.31:0,96,1458	0/0:37,0:37:99:0,111,1679	0/0:28,0:28:84.25:0,84,1235	0/0:26,0:26:78.25:0,78,1188	0/0:10,0:10:30.07:0,30,424	0/0:37,0:37:99:0,111,1688	0/0:14,0:14:42.13:0,42,635	0/0:17,0:17:51.16:0,51,776	0/1:13,11:24:99:325,0,516	0/0:37,0:37:99:0,111,1698	0/0:35,0:35:99:0,102,1562	0/0:12,0:11:33.10:0,33,493	0/0:34,0:34:99:0,99,1499	0/0:6,0:6:18.06:0,18,279	0/0:27,0:27:81.22:0,81,1197	0/0:36,0:36:99:0,102,1572	0/0:13,0:13:39.12:0,39,587	0/0:31,0:31:93.30:0,93,1429	0/0:26,0:26:78.23:0,78,1156	0/0:25,0:25:69.22:0,69,1056	0/0:9,0:9:24.08:0,24,376
chr10	41566884	.	CA	C	1638.36	PASS	AB=0.826;AC=25;AF=0.500;AN=50;BaseQRankSum=11.978;DP=652;FS=6.389;HRun=1;HaplotypeScore=89.4007;InbreedingCoeff=0.8096;MQ=71.55;MQ0=17;MQRankSum=-11.904;QD=10.78;ReadPosRankSum=3.473;VQSLOD=1.8738;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:96.23:0,96,1433	0/0:16,0:16:48.16:0,48,764	0/0:44,0:42:99:0,123,1927	0/0:48,0:48:99:0,132,1945	0/0:36,0:36:99:0,108,1689	0/0:53,0:53:99:0,157,2493	0/0:47,0:47:99:0,141,2196	1/1:0,4:3:9.03:114,9,0	0/0:62,0:62:99:0,184,2918	1/1:0,9:4:12.04:153,12,0	1/1:0,5:2:3.01:35,3,0	1/1:0,12:6:6.02:71,6,0	0/0:54,0:54:99:0,160,2500	0/0:22,0:22:63.19:0,63,974	1/1:1,16:14:21.06:251,21,0	0/1:30,8:33:43.20:43,0,1268	0/0:25,0:26:78.11:0,78,1163	1/1:0,1:1:3.01:36,3,0	1/1:0,4:4:9.03:114,9,0	1/1:0,5:3:9.03:110,9,0	./.	0/0:51,0:51:99:0,147,2263	1/1:0,11:4:12.03:138,12,0	./.	1/1:0,9:6:18.06:217,18,0	1/1:0,12:6:15.05:192,15,0	1/1:0,25:20:30.05:361,30,0	./.
chr10	41566886	.	TC	T	704.11	PASS	AC=24;AF=0.480;AN=50;BaseQRankSum=11.985;DP=653;FS=6.429;HRun=2;HaplotypeScore=93.1372;InbreedingCoeff=0.8868;MQ=71.57;MQ0=16;MQRankSum=-11.765;QD=6.23;ReadPosRankSum=3.636;VQSLOD=0.8981;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,99,1479	0/0:16,0:16:45.15:0,45,669	0/0:44,0:43:99:0,123,1685	0/0:48,0:48:99:0,136,1837	0/0:36,0:36:99:0,105,1547	0/0:54,0:54:99:0,160,2357	0/0:47,0:47:99:0,135,2022	1/1:0,4:3:8.95:68,9,0	0/0:62,0:62:99:0,181,2676	1/1:0,9:4:11.92:89,12,0	1/1:0,5:2:2.90:16,3,0	1/1:0,12:6:5.81:32,6,0	0/0:54,0:54:99:0,160,2351	0/0:21,0:21:60.20:0,60,899	1/1:0,16:13:20.32:112,20,0	0/0:31,8:34:37.99:0,38,1266	0/0:25,0:25:75.24:0,75,1091	1/1:0,1:1:2.99:23,3,0	1/1:0,4:4:8.96:68,9,0	1/1:0,5:3:8.81:53,9,0	./.	0/0:53,0:53:99:0,147,2155	1/1:0,11:4:11.57:64,12,0	./.	1/1:0,9:6:17.58:103,18,0	1/1:0,12:6:14.87:104,15,0	1/1:0,25:20:29.20:172,29,0	./.
chr10	41566889	.	AT	A	1625.33	PASS	AB=0.837;AC=25;AF=0.500;AN=50;BaseQRankSum=11.988;DP=664;FS=6.403;HRun=1;HaplotypeScore=89.3009;InbreedingCoeff=0.8096;MQ=71.18;MQ0=16;MQRankSum=-11.851;QD=10.35;ReadPosRankSum=4.109;VQSLOD=1.7268;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,105,1629	0/0:14,0:14:42.14:0,42,670	0/0:48,0:44:99:0,129,1927	0/0:47,0:47:99:0,135,2012	0/0:36,0:36:99:0,108,1590	0/0:54,0:54:99:0,159,2463	0/0:47,0:47:99:0,135,2124	1/1:0,4:3:9.03:116,9,0	0/0:63,0:63:99:0,187,2886	1/1:1,9:4:12.04:152,12,0	1/1:0,5:2:3.01:35,3,0	1/1:0,12:6:6.02:71,6,0	0/0:56,0:56:99:0,169,2635	0/0:21,0:21:60.20:0,60,953	1/1:1,16:14:21.06:249,21,0	0/1:33,8:36:34.09:34,0,1354	0/0:25,0:25:75.23:0,75,1148	1/1:0,1:1:3.01:35,3,0	1/1:0,4:4:9.03:116,9,0	1/1:0,5:3:9.03:109,9,0	./.	0/0:53,0:53:99:0,150,2329	1/1:1,11:5:12.04:140,12,0	./.	1/1:0,9:6:18.06:218,18,0	1/1:0,12:6:15.05:187,15,0	1/1:0,25:20:29.96:361,30,0	./.
chr10	41567298	.	CA	C	1530.10	PASS	AC=24;AF=0.632;AN=38;BaseQRankSum=6.956;DP=398;FS=7.636;HRun=2;HaplotypeScore=35.2123;InbreedingCoeff=0.7145;MQ=17.87;MQ0=249;MQRankSum=-0.589;QD=12.24;ReadPosRankSum=0.718;VQSLOD=1.6145;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	0/0:9,0:4:12.04:0,12,168	./.	./.	0/0:23,0:12:6.02:0,6,90	0/0:34,0:13:21.07:0,21,314	0/0:19,0:3:6.02:0,6,90	./.	0/0:26,0:8:8.98:0,9,108	1/1:1,13:6:18.01:202,18,0	1/1:1,11:5:6.01:65,6,0	1/1:0,7:3:6.02:78,6,0	0/0:27,0:11:21.07:0,21,314	./.	1/1:0,12:5:6.02:78,6,0	./.	1/1:0,5:1:3.01:39,3,0	./.	./.	1/1:0,9:2:3.01:39,3,0	./.	0/0:37,0:24:27.09:0,27,404	1/1:1,12:2:3.01:39,3,0	1/1:2,5:1:3.01:39,3,0	1/1:0,14:13:33.11:420,33,0	1/1:1,12:8:24.07:298,24,0	1/1:0,15:8:18.06:231,18,0	1/1:0,4:4:12.04:156,12,0
chr10	41567536	.	C	CAG	1413.89	PASS	AC=22;AF=0.579;AN=38;BaseQRankSum=5.022;DP=429;FS=0.000;HRun=0;HaplotypeScore=29.7486;InbreedingCoeff=0.6758;MQ=17.58;MQ0=281;MQRankSum=-0.134;QD=10.10;ReadPosRankSum=-0.247;VQSLOD=2.9338;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,13:6:12.04:206,12,0	0/0:17,0:5:12:0,12,140	./.	./.	0/0:14,0:4:3.01:0,3,40	0/0:30,0:16:21.07:0,21,279	0/0:21,0:1:3.01:0,3,40	./.	0/0:29,0:12:21.07:0,21,279	1/1:6,14:6:12.04:207,12,0	1/1:4,13:4:3.01:52,3,0	1/1:3,14:11:12.04:206,12,0	0/0:20,0:10:14.96:0,15,199	0/0:20,0:11:11.96:0,12,137	1/1:1,9:3:3.01:52,3,0	1/1:0,6:4:3.01:52,3,0	0/0:6,0:2:3.01:0,3,40	./.	1/1:3,2:1:3.01:44,3,0	1/1:5,11:7:8.95:120,9,0	./.	./.	./.	./.	1/1:3,11:9:15.01:243,15,0	1/1:1,11:6:18.02:279,18,0	1/1:1,6:3:6.02:103,6,0	./.
chr10	41567698	.	TTC	T	1344	PASS	AB=0.533;AC=23;AF=0.460;AN=50;BaseQRankSum=1.266;DP=376;FS=6.791;HRun=0;HaplotypeScore=56.6922;InbreedingCoeff=0.7707;MQ=45.82;MQ0=20;MQRankSum=0.518;QD=9.88;ReadPosRankSum=2.821;VQSLOD=2.4684;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:22:41.92:0,42,419	0/0:9,0:9:27.09:0,27,504	0/0:21,0:11:33.11:0,33,590	0/0:31,0:14:31.69:0,32,522	0/0:13,0:13:24.01:0,24,236	0/0:26,0:22:63.13:0,63,785	0/0:11,0:11:33.11:0,33,582	./.	0/0:18,0:15:45.08:0,45,657	1/1:0,16:12:27.08:387,27,0	1/1:0,10:6:2.97:20,3,0	1/1:10,0:7:12:153,12,0	0/0:16,0:14:36.12:0,36,615	0/0:17,0:15:41.91:0,42,445	1/1:0,13:11:8.98:109,9,0	0/0:8,0:7:18:0,18,215	0/0:13,0:10:29.93:0,30,470	1/1:6,0:6:12.01:151,12,0	./.	1/1:0,14:10:5.99:66,6,0	1/1:1,14:12:5.98:65,6,0	0/0:19,0:19:51.13:0,51,791	1/1:0,9:9:3.01:45,3,0	./.	1/1:0,19:16:9.03:126,9,0	1/1:2,10:6:15.05:225,15,0	0/1:1,7:8:35.97:141,0,36	1/1:1,3:3:3.01:45,3,0
chr10	41567781	.	AG	A	263.75	PASS	AC=2;AF=0.037;AN=54;BaseQRankSum=2.150;DP=600;FS=2.763;HRun=4;HaplotypeScore=62.2658;InbreedingCoeff=0.8944;MQ=37.83;MQ0=158;MQRankSum=2.663;QD=13.19;ReadPosRankSum=0.404;VQSLOD=1.9051;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:35:75.25:0,75,1045	0/0:12,0:10:24.04:0,24,301	./.	0/0:25,0:8:14.72:0,15,173	0/0:23,0:18:39.13:0,39,537	0/0:15,1:15:35.96:0,36,503	0/0:23,0:16:39.04:0,39,501	0/0:24,0:10:24.08:0,24,328	0/0:31,0:27:60.20:0,60,839	0/0:30,0:25:72.24:0,72,1008	0/0:13,0:11:15.05:0,15,209	0/0:23,0:21:48.16:0,48,671	0/0:21,0:15:36.12:0,36,492	0/0:18,0:14:30.10:0,30,420	0/0:17,0:11:24.08:0,24,336	0/0:12,0:12:33.11:0,33,456	1/1:3,17:13:30.09:358,30,0	0/0:14,0:10:18.06:0,18,252	0/0:20,0:7:21.07:0,21,294	0/0:25,0:15:27.09:0,27,378	0/0:44,0:29:66.05:0,66,923	0/0:20,0:18:39.13:0,39,546	0/0:19,0:13:27.09:0,27,377	0/0:23,0:15:21.03:0,21,271	0/0:28,0:18:33.11:0,33,462	0/0:20,0:14:42.14:0,42,588	0/0:14,0:13:33.11:0,33,461	0/0:7,0:3:9.03:0,9,126
chr10	41569054	.	GT	G	9687.79	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=15.201;DP=670;FS=3.979;HRun=7;HaplotypeScore=106.0376;InbreedingCoeff=0.9607;MQ=79.61;MQ0=1;MQRankSum=-4.900;QD=25.23;ReadPosRankSum=1.929;VQSLOD=4.7945;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:81.25:0,81,1003	0/0:8,0:8:24.08:0,24,302	0/0:20,1:20:28.47:0,28,524	0/0:29,0:29:75.18:0,75,891	0/0:30,0:30:90.27:0,90,1117	0/0:28,0:28:69.22:0,69,868	0/0:17,0:17:48.09:0,48,572	1/1:6,25:31:72.15:734,72,0	0/0:22,1:23:32.59:0,33,724	1/1:4,34:37:90.20:917,90,0	1/1:1,20:21:48.10:489,48,0	1/1:1,27:27:69.16:704,69,0	0/0:20,0:20:60.18:0,60,743	0/0:22,0:22:60.19:0,60,755	1/1:1,26:27:72.16:735,72,0	0/0:26,0:26:69.21:0,69,856	1/1:0,1:1:3.01:31,3,0	1/1:4,11:15:27.05:275,27,0	1/1:4,21:24:66.14:667,66,0	1/1:2,31:33:93.21:948,93,0	1/1:3,29:32:78.17:796,78,0	0/0:30,0:30:87.21:0,87,1041	1/1:2,22:24:60.13:612,60,0	1/1:1,18:19:48.11:490,48,0	1/1:1,30:31:81.18:821,81,0	1/1:5,25:30:69.15:704,69,0	1/1:4,23:27:69.15:704,69,0	1/1:0,2:2:6.01:61,6,0
chr10	41569540	.	ATGTGTGTTTTTGTTGGTGTGTGTGTGTGTGTG	A	885.10	PASS	AC=6;AF=0.111;AN=54;BaseQRankSum=1.586;DP=773;FS=5.866;HRun=0;HaplotypeScore=428.0310;InbreedingCoeff=0.8753;MQ=61.97;MQ0=63;MQRankSum=-1.455;QD=13.83;ReadPosRankSum=-0.292;VQSLOD=0.1436;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:91.44:0,91,5478	0/0:12,0:11:24.08:0,24,2494	0/0:53,0:25:43.31:0,43,1531	0/0:76,0:34:69.99:0,70,2244	0/0:23,0:23:55:0,55,3176	0/0:18,0:18:48.15:0,48,2757	0/0:17,0:17:45.14:0,45,2375	0/0:37,0:25:63.21:0,63,1797	0/0:30,0:30:69.23:0,69,5187	0/0:31,0:27:57.18:0,57,2003	0/0:25,0:20:23.22:0,23,345	1/1:3,31:34:7.70:553,8,0	0/0:32,0:32:73.72:0,74,5989	0/0:29,0:29:81.28:0,81,4455	0/0:38,0:35:39.13:0,39,1357	0/0:27,0:27:72.71:0,73,3769	./.	0/0:19,0:9:21.07:0,21,538	0/0:21,0:16:27.09:0,27,495	0/0:19,0:18:36.11:0,36,2026	0/0:43,0:34:19.31:0,19,1377	0/0:25,0:25:72.25:0,72,5330	1/1:1,9:10:0.80:1,1,0	1/1:20,0:20:21.07:443,21,0	0/0:29,0:26:30.07:0,30,716	0/0:24,0:10:30.10:0,30,1171	0/0:31,0:27:51.18:0,51,4757	0/0:7,0:5:12.04:0,12,1358
chr10	41569547	.	TTTTTGTTG	T	524.14	PASS	AB=1.000;AC=5;AF=0.093;AN=54;BaseQRankSum=2.987;DP=781;FS=11.739;HRun=0;HaplotypeScore=172.0273;InbreedingCoeff=0.6481;MQ=57.08;MQ0=82;MQRankSum=-3.000;QD=6.17;ReadPosRankSum=-3.908;VQSLOD=0.9203;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:69.31:0,69,2775	0/0:10,0:9:24.08:0,24,917	0/0:59,0:20:39.82:0,40,1382	0/0:75,0:27:71.17:0,71,1972	0/0:21,0:21:50.68:0,51,1433	0/0:18,0:18:42.86:0,43,1158	0/0:21,0:20:47.86:0,48,1269	0/0:39,0:27:70.36:0,70,1257	0/0:28,0:28:74.28:0,74,2206	0/1:33,0:27:21.12:21,0,832	0/0:27,0:22:22.54:0,23,255	1/1:32,1:32:9.50:181,10,0	0/0:32,0:32:73.31:0,73,2267	0/0:29,0:29:45.88:0,46,2215	0/0:39,0:36:32.71:0,33,521	0/0:28,0:28:11.68:0,12,1764	./.	0/0:20,0:9:21.07:0,21,354	0/0:17,0:11:22.23:0,22,475	0/0:17,0:16:35.47:0,35,709	0/0:45,0:35:2.26:0,2,558	0/0:25,0:25:58.18:0,58,2356	0/0:9,0:9:0:0,0,0	1/1:9,10:19:21.07:443,21,0	0/0:31,0:27:16.27:0,16,215	0/0:26,0:12:22.17:0,22,411	0/0:33,0:29:54.02:0,54,1352	0/0:7,0:5:12.04:0,12,349
chr10	41569572	.	G	GCCCA	157.55	PASS	AB=1.000;AC=4;AF=0.074;AN=54;BaseQRankSum=1.584;DP=712;FS=1.846;HRun=0;HaplotypeScore=134.6882;InbreedingCoeff=0.4808;MQ=44.68;MQ0=73;MQRankSum=-1.959;QD=2.22;ReadPosRankSum=-0.387;VQSLOD=2.5314;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:37:81.63:0,82,1765	0/0:10,0:9:27.09:0,27,546	0/0:38,0:5:6.02:0,6,125	0/0:46,0:5:12.04:0,12,234	0/0:22,0:22:51.61:0,52,1001	0/0:18,0:18:42.14:0,42,826	0/0:25,0:23:51.64:0,52,1021	0/0:36,0:31:92.89:0,93,1763	0/0:28,0:28:69.23:0,69,1256	0/0:27,0:22:54.17:0,54,989	0/0:23,0:18:9.03:0,9,170	0/1:36,0:34:16.27:135,0,16	0/0:33,0:32:71.17:0,71,1206	0/0:21,0:21:57.19:0,57,1008	0/0:35,0:33:27.04:0,27,470	0/0:27,0:26:60.15:0,60,1081	./.	0/0:15,0:6:9.03:0,9,186	0/0:16,0:13:31.93:0,32,510	0/0:12,0:11:15.05:0,15,305	0/0:49,0:40:42.59:0,43,829	0/0:25,0:25:66.23:0,66,1304	0/1:13,0:12:0:0,0,0	1/1:12,8:22:6.02:116,6,0	0/0:25,0:22:24.08:0,24,419	0/0:29,0:20:53.97:0,54,1037	0/0:36,0:33:62.86:0,63,1239	0/0:8,0:5:12.04:0,12,220
chr10	41570733	.	AT	A	7871.22	PASS	AC=30;AF=0.556;AN=54;BaseQRankSum=18.242;DP=594;FS=5.320;HRun=8;HaplotypeScore=107.0180;InbreedingCoeff=0.9989;MQ=68.37;MQ0=0;MQRankSum=-0.890;QD=24.83;ReadPosRankSum=1.063;VQSLOD=4.7257;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:50,1:51:99:0,115,1657	0/0:8,0:8:24.06:0,24,279	0/0:11,0:10:29.57:0,30,321	0/0:10,0:9:27.07:0,27,306	0/0:29,0:29:81.21:0,81,945	0/0:26,0:26:75.18:0,75,877	0/0:19,0:19:51.14:0,51,604	1/1:7,17:24:48.06:457,48,0	0/0:24,0:24:60.18:0,60,725	1/1:1,24:25:72.11:690,72,0	1/1:3,21:24:54.06:512,54,0	1/1:5,21:26:63.10:604,63,0	0/0:22,0:22:60.18:0,60,724	0/0:29,0:30:75.20:0,75,882	1/1:1,30:31:90.14:863,90,0	0/0:24,0:24:69.20:0,69,824	./.	1/1:0,17:17:45.07:431,45,0	1/1:2,14:16:42.03:391,42,0	1/1:1,22:23:66.06:622,66,0	1/1:3,18:21:54.09:518,54,0	0/0:23,0:23:63.19:0,63,761	1/1:0,15:15:45.07:431,45,0	1/1:2,16:18:48.07:460,48,0	1/1:3,15:18:42.06:402,42,0	1/1:2,23:25:69.09:656,69,0	1/1:2,22:24:66.10:632,66,0	1/1:3,7:10:21.03:201,21,0
chr10	41570976	.	T	TA	14876.52	PASS	AC=30;AF=0.556;AN=54;BaseQRankSum=12.354;DP=626;FS=2.095;HRun=0;HaplotypeScore=86.8553;InbreedingCoeff=0.9997;MQ=65.12;MQ0=1;MQRankSum=-1.777;QD=43.75;ReadPosRankSum=1.798;VQSLOD=5.2239;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,114,1569	0/0:10,0:10:30.10:0,30,419	0/0:33,0:30:68.36:0,68,1052	0/0:28,0:26:53.46:0,53,894	0/0:26,0:26:78.26:0,78,1090	0/0:23,0:23:69.23:0,69,964	0/0:23,0:23:66.21:0,66,905	1/1:1,25:26:73.08:1077,73,0	0/0:22,0:22:66.21:0,66,904	1/1:0,23:23:69.22:1078,69,0	1/1:0,17:17:45.15:719,45,0	1/1:0,19:19:48.16:767,48,0	0/0:28,0:28:84.28:0,84,1173	0/0:13,0:13:39.13:0,39,545	1/1:2,37:39:99:1676,105,0	0/0:18,0:18:48.16:0,48,670	./.	1/1:1,22:23:29.67:879,30,0	1/1:0,21:21:63.19:980,63,0	1/1:0,23:23:60.20:958,60,0	1/1:0,36:36:99:1678,105,0	0/0:23,0:23:69.22:0,69,947	1/1:0,17:18:48.16:757,48,0	1/1:0,14:14:42.14:671,42,0	1/1:0,24:24:66.23:1053,66,0	1/1:0,19:19:57.16:862,57,0	1/1:0,29:29:81.28:1294,81,0	1/1:0,9:9:27.09:427,27,0
chr10	41572866	.	A	AT	11558.80	PASS	AC=30;AF=0.556;AN=54;BaseQRankSum=1.359;DP=541;FS=10.780;HRun=4;HaplotypeScore=71.3116;InbreedingCoeff=0.9993;MQ=60.40;MQ0=0;MQRankSum=-0.245;QD=37.05;ReadPosRankSum=2.491;VQSLOD=4.5549;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:93.23:0,93,1033	0/0:9,0:9:27.08:0,27,306	0/0:17,0:14:30.08:0,30,338	0/0:11,0:10:29.87:0,30,310	0/0:31,0:31:93.25:0,93,1045	0/0:25,0:25:75.21:0,75,851	0/0:11,0:11:30.08:0,30,340	1/1:5,19:24:48.16:657,48,0	0/0:18,0:18:51.15:0,51,579	1/1:6,15:21:54.16:708,54,0	1/1:2,18:20:51.17:698,51,0	1/1:0,16:16:45.15:616,45,0	0/0:24,0:24:60.17:0,60,681	0/0:22,0:22:57.14:0,57,637	1/1:2,19:21:57.19:780,57,0	0/0:13,0:13:36.09:0,36,398	./.	1/1:0,18:18:54.18:738,54,0	1/1:1,21:21:60.20:818,60,0	1/1:0,38:38:99:1497,111,0	1/1:0,14:14:42.14:575,42,0	0/0:16,0:16:48.14:0,48,545	1/1:1,17:18:48.16:657,48,0	1/1:0,12:12:36.12:492,36,0	1/1:0,21:21:60.20:821,60,0	1/1:2,26:28:78.26:1066,78,0	1/1:2,28:29:81.27:1108,81,0	1/1:0,9:9:24.08:328,24,0
chr10	41573545	.	G	GTC	1380.76	PASS	AB=0.979;AC=22;AF=0.440;AN=50;BaseQRankSum=10.636;DP=540;FS=4.799;HRun=0;HaplotypeScore=182.4587;InbreedingCoeff=0.7471;MQ=71.66;MQ0=9;MQRankSum=-7.081;QD=8.58;ReadPosRankSum=-1.057;VQSLOD=2.9957;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:31:44.21:0,44,600	0/0:8,0:8:18.06:0,18,247	0/0:56,0:35:74.72:0,75,982	0/0:67,0:50:56.16:0,56,1077	0/0:23,0:23:51.17:0,51,693	0/0:24,0:24:72.24:0,72,989	0/0:28,0:28:71.49:0,71,881	1/1:12,0:10:11.05:96,11,0	0/0:23,0:23:60.18:0,60,798	1/1:15,1:16:32.53:327,33,0	./.	0/1:22,1:23:2.27:60,0,2	0/0:21,0:21:57.17:0,57,759	0/0:16,0:16:36.08:0,36,471	1/1:21,1:22:3.01:53,3,0	0/0:25,0:25:40.30:0,40,550	./.	1/1:4,1:5:10.98:115,11,0	0/1:10,0:10:29.61:82,0,30	1/1:10,0:10:8.18:51,8,0	1/1:10,1:11:3.01:53,3,0	0/0:22,0:21:60.19:0,60,810	1/1:13,0:13:11.36:112,11,0	0/0:14,1:15:0.13:0,0,1	./.	1/1:18,0:18:38.75:347,39,0	1/1:16,0:16:25.78:183,26,0	1/1:5,0:4:8.95:92,9,0
chr10	41573549	.	CTG	C	1751.39	PASS	AB=0.689;AC=22;AF=0.440;AN=50;BaseQRankSum=10.940;DP=519;FS=0.000;HRun=0;HaplotypeScore=175.3577;InbreedingCoeff=0.6740;MQ=68.30;MQ0=9;MQRankSum=-7.239;QD=10.61;ReadPosRankSum=-2.178;VQSLOD=2.8979;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:44.69:0,45,830	0/0:7,0:7:18.06:0,18,347	0/0:52,0:34:72.51:0,73,1391	0/0:65,0:49:44.37:0,44,1578	0/0:22,0:22:51.17:0,51,973	0/0:25,0:25:75.24:0,75,1413	0/0:28,0:28:71.44:0,71,1262	0/1:5,4:7:0.16:99,0,0	0/0:23,0:23:63.19:0,63,1138	1/1:9,7:16:33.44:385,33,0	./.	0/1:5,17:22:20.17:139,0,20	0/0:22,0:22:63.21:0,63,1145	0/0:16,0:16:36.12:0,36,678	1/1:6,15:21:3:29,3,0	0/0:26,0:26:27.21:0,27,758	./.	1/1:4,1:5:8.94:86,9,0	0/1:5,3:8:33.23:60,0,33	1/1:2,8:10:8.62:69,9,0	1/1:3,6:9:3:29,3,0	0/0:21,0:20:60.20:0,60,1124	1/1:6,4:10:9.21:74,9,0	0/1:12,5:17:0.32:0,0,0	./.	1/1:4,13:17:39.07:497,39,0	1/1:4,12:16:27.09:361,27,0	1/1:2,3:4:9.03:104,9,0
chr10	41573553	.	CTA	C	751.75	PASS	AC=26;AF=0.520;AN=50;BaseQRankSum=10.823;DP=479;FS=2.514;HRun=0;HaplotypeScore=173.6947;InbreedingCoeff=0.8191;MQ=71.04;MQ0=8;MQRankSum=-9.573;QD=5.37;ReadPosRankSum=-1.633;VQSLOD=2.7013;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:41.47:0,41,775	0/0:8,0:8:21.07:0,21,396	0/0:46,0:33:88.98:0,89,1487	0/0:65,0:50:54.92:0,55,1656	0/0:21,0:21:48.16:0,48,888	0/0:25,0:25:75.26:0,75,1434	0/0:26,0:26:65.40:0,65,1125	1/1:6,0:5:8.03:57,8,0	0/0:21,0:21:57.20:0,57,1098	1/1:11,1:12:24.87:161,25,0	./.	1/1:21,1:22:12.65:87,13,0	0/0:22,0:22:63.22:0,63,1171	0/0:16,0:16:36.12:0,36,668	1/1:19,1:20:2.04:6,2,0	0/0:25,0:25:26.56:0,27,735	./.	1/1:2,1:3:5.95:53,6,0	1/1:5,0:5:7.87:42,8,0	1/1:9,0:9:6.24:34,6,0	1/1:7,1:8:2.04:6,2,0	0/0:20,0:19:57.20:0,57,1099	1/1:9,0:9:1.22:6,1,0	1/1:14,0:14:1.59:5,2,0	./.	1/1:13,0:13:32.38:237,32,0	1/1:15,0:14:26.74:193,27,0	1/1:4,0:3:8.73:51,9,0
chr10	41573557	.	CTA	C	659.14	PASS	AB=0.931;AC=22;AF=0.440;AN=50;BaseQRankSum=9.984;DP=472;FS=5.611;HRun=0;HaplotypeScore=175.3863;InbreedingCoeff=0.7165;MQ=74.19;MQ0=7;MQRankSum=-9.052;QD=4.99;ReadPosRankSum=-1.323;VQSLOD=2.7828;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:38.47:0,38,749	0/0:8,0:8:21.07:0,21,404	0/0:42,0:34:77.11:0,77,1461	0/0:68,1:53:83.30:0,83,1792	0/0:21,0:21:48.15:0,48,878	0/0:27,0:27:63.62:0,64,1391	0/0:24,0:25:65.42:0,65,1189	1/1:5,0:4:5.99:51,6,0	0/0:23,0:23:63.20:0,63,1166	1/1:11,1:12:4.46:119,4,0	./.	1/1:21,0:21:5.18:92,5,0	0/0:22,0:22:63.22:0,63,1187	0/0:17,0:17:35.98:0,36,675	0/1:18,1:19:0:0,0,0	0/0:23,0:23:11.30:0,11,661	./.	1/1:3,0:3:5.93:52,6,0	1/1:3,0:3:5.36:31,5,0	0/1:8,1:9:2.86:13,0,3	0/1:6,1:7:0:0,0,0	0/0:21,0:20:60.16:0,60,1089	1/1:8,0:8:1.01:3,1,0	0/1:13,0:13:0.32:0,0,0	./.	1/1:11,0:11:32:233,32,0	1/1:17,0:16:26.66:194,27,0	1/1:4,0:3:5.87:35,6,0
chr10	41573561	.	GTCCA	G	983.58	PASS	AB=0.964;AC=24;AF=0.480;AN=50;BaseQRankSum=10.160;DP=473;FS=0.000;HRun=0;HaplotypeScore=186.2838;InbreedingCoeff=0.6236;MQ=73.96;MQ0=6;MQRankSum=-5.700;QD=4.49;ReadPosRankSum=-1.279;VQSLOD=2.5031;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:36.01:0,36,471	0/0:8,0:8:21.07:0,21,545	0/0:45,0:33:84.05:0,84,1906	0/1:71,0:51:45.58:46,0,1871	0/0:21,0:21:48.16:0,48,1269	0/0:26,0:26:71.30:0,71,1925	0/0:26,0:26:65.25:0,65,1721	./.	0/0:23,0:23:54.19:0,54,1467	1/1:10,1:11:14.57:143,15,0	0/1:9,0:9:0:0,0,0	1/1:18,3:21:20.03:199,20,0	0/0:23,0:23:60.19:0,60,1482	0/0:17,0:17:29.46:0,29,724	1/1:15,4:19:6.01:64,6,0	0/1:23,0:23:52.53:53,0,358	./.	1/1:3,0:3:3.01:44,3,0	1/1:2,1:3:6.02:85,6,0	1/1:7,2:9:4.34:23,4,0	0/1:5,1:6:0:0,0,0	0/0:21,0:20:57.19:0,57,1476	0/0:6,1:7:1.16:0,1,3	1/1:11,1:12:0.03:1,0,0	./.	1/1:8,3:11:14.84:189,15,0	1/1:12,5:16:22.88:254,23,0	1/1:0,3:3:6:54,6,0
chr10	41573563	.	CCA	C	745.42	PASS	AB=0.823;AC=26;AF=0.520;AN=50;BaseQRankSum=10.202;DP=432;FS=0.610;HRun=0;HaplotypeScore=158.6625;InbreedingCoeff=0.6244;MQ=75.58;MQ0=7;MQRankSum=-7.305;QD=3.80;ReadPosRankSum=0.029;VQSLOD=2.9633;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,3:26:34.85:0,35,429	0/0:8,0:8:21.07:0,21,413	0/0:42,0:31:80.22:0,80,1502	0/1:69,2:48:15.05:15,0,1490	0/0:23,0:23:51.17:0,51,1008	0/0:26,0:26:63.63:0,64,1439	0/0:25,1:26:67.11:0,67,1329	./.	0/0:20,0:20:54.19:0,54,1094	1/1:5,1:6:11.63:67,12,0	0/1:2,2:4:0:0,0,0	1/1:15,5:20:20.94:185,21,0	0/0:22,0:22:63.20:0,63,1184	0/0:15,1:16:29.77:0,30,547	1/1:8,6:14:5:26,5,0	0/1:19,4:23:50.64:51,0,435	./.	1/1:0,1:1:3.01:38,3,0	1/1:1,1:2:6.01:63,6,0	1/1:6,4:10:4.77:34,5,0	0/1:3,1:4:0:0,0,0	0/0:20,0:19:57.09:0,57,1100	1/1:4,3:7:1.32:4,1,0	1/1:9,2:11:0.37:1,0,0	./.	1/1:5,0:5:14.94:130,15,0	1/1:8,5:12:24.04:258,24,0	1/1:3,0:3:5.95:46,6,0
chr10	41573569	.	CTA	C	802.13	PASS	AB=0.976;AC=21;AF=0.420;AN=50;BaseQRankSum=9.801;DP=497;FS=13.953;HRun=0;HaplotypeScore=173.5595;InbreedingCoeff=0.5846;MQ=70.93;MQ0=12;MQRankSum=-8.717;QD=4.64;ReadPosRankSum=-1.194;VQSLOD=1.6911;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:25,7:32:31.01:208,31,0	0/0:8,0:8:21.07:0,21,403	0/0:50,0:27:56.85:0,57,970	0/0:82,0:51:73.68:0,74,1415	0/0:23,0:23:45.15:0,45,858	0/0:22,0:22:63.20:0,63,1141	0/0:27,0:27:71.44:0,71,1290	1/1:8,0:4:8.69:53,9,0	0/0:22,0:22:60.18:0,60,1100	0/1:10,0:10:12.63:13,0,55	./.	1/1:17,3:20:20.49:139,20,0	0/0:20,0:20:57.16:0,57,938	0/0:17,0:17:23.96:0,24,458	0/0:15,0:15:5.39:0,5,23	1/1:20,8:28:34.22:221,34,0	./.	0/0:1,0:2:2.19:0,2,28	0/1:4,0:4:16.48:16,0,17	1/1:12,0:12:2.91:19,3,0	0/1:4,0:4:0:0,0,0	0/0:21,0:20:33.21:0,33,977	1/1:6,3:9:1.01:3,1,0	0/1:13,2:15:0.63:1,0,1	./.	1/1:10,0:10:8.98:128,9,0	0/1:18,0:17:2.93:132,0,3	1/1:3,0:3:5.91:37,6,0
chr10	41573570	.	TATCTCC	T	813.15	PASS	AB=0.984;AC=18;AF=0.346;AN=52;BaseQRankSum=10.010;DP=497;FS=0.000;HRun=0;HaplotypeScore=197.5074;InbreedingCoeff=0.3059;MQ=70.10;MQ0=12;MQRankSum=-6.797;QD=4.99;ReadPosRankSum=0.378;VQSLOD=2.3841;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:31,0:31:10.67:55,0,11	0/0:8,0:8:21.07:0,21,620	0/0:49,0:26:59.73:0,60,1283	0/0:81,0:51:12.68:0,13,1741	0/0:23,0:23:45.14:0,45,1493	0/0:22,0:22:63.17:0,63,1925	0/0:27,0:27:71.59:0,72,2194	0/0:8,0:4:6.21:0,6,26	0/0:22,0:22:60.21:0,60,1909	0/1:10,0:10:38.53:39,0,47	0/1:6,1:7:0:0,0,0	1/1:20,0:20:19.12:219,19,0	0/0:20,0:20:57.05:0,57,1459	0/0:18,0:18:23.72:0,24,793	0/0:12,3:15:1.79:0,2,9	1/1:28,0:28:26.20:236,26,0	./.	0/1:2,0:2:13.93:32,0,14	0/1:4,0:4:29.61:61,0,30	1/1:12,0:12:0.10:1,0,0	0/1:4,0:4:0:0,0,0	0/0:21,0:20:57.18:0,57,1860	0/0:10,0:10:2.40:0,2,10	1/1:14,0:14:0.51:2,1,0	./.	0/1:10,0:10:2.92:133,0,3	0/1:18,0:17:35.40:146,0,35	1/1:3,0:3:5.91:38,6,0
chr10	41573586	.	TGC	T	3062.77	PASS	AB=0.774;AC=35;AF=0.648;AN=54;BaseQRankSum=5.843;DP=528;FS=21.739;HRun=0;HaplotypeScore=155.4221;InbreedingCoeff=0.5076;MQ=63.10;MQ0=14;MQRankSum=-6.843;QD=7.79;ReadPosRankSum=-2.591;VQSLOD=1.4594;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:20,8:28:16.64:178,17,0	0/0:11,0:11:25.30:0,25,293	0/1:42,6:17:57.31:57,0,337	0/1:67,2:33:66.12:66,0,519	0/0:19,8:27:33.03:0,33,505	0/0:20,0:20:45.20:0,45,494	0/0:23,0:24:49.31:0,49,583	1/1:17,7:17:23.86:455,24,0	0/0:25,1:26:41.08:0,41,559	1/1:14,6:20:37.95:488,38,0	0/1:3,12:15:0.01:0,0,0	1/1:10,5:15:12:167,12,0	0/1:19,0:20:3.06:3,0,206	0/1:20,0:20:99:125,0,211	1/1:7,6:13:18.71:202,19,0	1/1:21,6:26:29.82:377,30,0	./.	1/1:3,0:3:7.49:63,7,0	1/1:3,6:9:24.51:245,25,0	0/1:0,10:10:0.05:0,0,0	1/1:5,1:6:3.01:46,3,0	0/0:26,1:25:37.75:0,38,594	0/1:3,10:13:0.23:0,0,0	1/1:4,12:16:2.13:11,2,0	1/1:2,4:6:3.01:37,3,0	1/1:10,4:14:32.29:362,32,0	1/1:10,4:13:29.46:310,29,0	1/1:2,0:1:3.01:46,3,0
chr10	41573588	.	CCT	C	1441.14	PASS	AB=0.863;AC=14;AF=0.259;AN=54;BaseQRankSum=-4.820;DP=538;FS=13.944;HRun=0;HaplotypeScore=160.1476;InbreedingCoeff=0.4274;MQ=62.76;MQ0=15;MQRankSum=5.277;QD=7.39;ReadPosRankSum=5.112;VQSLOD=2.5892;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:0.98:0,1,17	0/1:8,3:11:76.40:76,0,227	0/1:51,0:17:10.88:11,0,60	0/0:72,0:33:10.50:0,11,105	0/0:27,0:27:2.99:0,3,24	1/1:9,10:20:29.92:324,30,0	1/1:11,10:23:23.73:235,24,0	0/0:25,0:18:14.54:0,15,62	1/1:11,16:27:35.93:393,36,0	0/0:20,0:20:21.94:0,22,297	0/0:15,0:15:0:0,0,0	1/1:11,0:11:5.62:27,6,0	1/1:6,12:20:29.67:304,30,0	0/0:21,0:21:12.16:0,12,84	0/0:13,0:13:11.50:0,12,88	0/0:28,0:27:3.45:0,3,55	./.	0/0:5,0:5:10.25:0,10,102	0/0:13,0:13:23.44:0,23,218	0/0:10,0:10:0:0,0,0	0/1:6,0:6:0.27:0,0,0	0/1:13,12:24:19.83:224,0,20	0/0:14,0:14:2.87:0,3,42	0/0:16,0:16:0.15:0,0,1	0/0:4,0:6:2.74:0,3,12	0/0:15,0:15:16.44:0,16,107	0/0:14,0:13:4.60:0,5,125	0/0:2,0:1:0:0,0,0
chr10	41573819	.	T	TC	10661.52	PASS	AC=28;AF=0.538;AN=52;BaseQRankSum=-0.121;DP=566;FS=1.886;HRun=2;HaplotypeScore=77.2191;InbreedingCoeff=0.9992;MQ=71.88;MQ0=0;MQRankSum=-4.581;QD=37.02;ReadPosRankSum=-0.659;VQSLOD=5.1134;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,114,1382	0/0:13,0:13:39.08:0,39,466	0/0:21,0:21:54.17:0,54,663	0/0:21,0:21:29.28:0,29,495	0/0:25,0:25:72.09:0,72,854	0/0:18,0:18:48.15:0,48,594	0/0:23,0:23:66.18:0,66,793	1/1:0,31:31:93.30:1320,93,0	0/0:29,0:29:75.22:0,75,917	1/1:3,26:28:72.18:991,72,0	1/1:2,12:14:32.96:419,33,0	1/1:0,19:19:48.16:690,48,0	0/0:17,0:17:45.13:0,45,545	0/0:20,0:20:57.16:0,57,693	1/1:2,18:21:51.17:727,51,0	0/0:21,0:21:57.17:0,57,694	./.	1/1:1,8:9:21.07:302,21,0	1/1:0,17:17:48.15:669,48,0	1/1:1,26:27:72.24:1035,72,0	1/1:2,20:21:57.19:821,57,0	0/0:20,0:20:57.15:0,57,681	1/1:2,18:20:54.15:755,54,0	1/1:0,26:26:72.24:1036,72,0	1/1:0,13:13:30.10:431,30,0	1/1:1,20:21:60.20:861,60,0	1/1:1,18:19:42.14:604,42,0	./.
chr10	41574420	.	GA	G	428.12	PASS	AB=1.000;AC=11;AF=0.220;AN=50;BaseQRankSum=1.256;DP=217;FS=2.164;HRun=1;HaplotypeScore=67.0712;InbreedingCoeff=0.3522;MQ=65.32;MQ0=1;MQRankSum=-5.167;QD=8.39;ReadPosRankSum=-3.177;VQSLOD=-0.2011;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:51.10:0,51,761	0/0:2,0:2:6.02:0,6,88	0/0:9,0:7:18.93:0,19,230	0/0:12,1:9:19.51:0,20,194	0/0:17,0:17:48.07:0,48,646	0/0:2,0:2:6.02:0,6,89	0/0:14,0:14:38.75:0,39,452	0/1:7,0:7:25.87:26,0,68	0/0:13,0:13:33.09:0,33,461	0/0:5,0:4:9.99:0,10,41	0/1:7,0:7:6.53:7,0,31	1/1:0,5:5:15.05:208,15,0	0/0:9,0:9:24.08:0,24,351	0/0:10,0:9:21.06:0,21,292	0/1:5,0:5:6.07:6,0,38	0/0:11,0:11:33.06:0,33,461	./.	0/0:3,0:3:8.03:0,8,38	./.	0/0:7,0:7:6.16:0,6,61	0/0:12,0:9:18.01:0,18,72	0/0:14,0:14:42.10:0,42,596	1/1:1,10:8:18.06:249,18,0	1/1:4,2:2:5.98:61,6,0	0/1:5,0:5:10.41:10,0,13	0/0:1,0:1:2.50:0,2,9	0/1:5,0:5:5.37:5,0,30	./.
chr10	41574501	.	T	TA	7535.91	PASS	AC=34;AF=0.630;AN=54;BaseQRankSum=7.592;DP=399;FS=8.392;HRun=7;HaplotypeScore=57.6418;InbreedingCoeff=0.9913;MQ=68.88;MQ0=5;MQRankSum=-2.205;QD=30.02;ReadPosRankSum=2.928;VQSLOD=5.2244;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,21:22:57.17:689,57,0	0/0:8,0:8:24:0,24,218	0/0:15,0:10:26.84:0,27,237	0/0:15,0:11:23.69:0,24,215	0/0:25,0:24:66.11:0,66,637	0/0:12,0:12:30.04:0,30,289	0/0:8,0:8:21.03:0,21,203	1/1:10,15:24:42.13:503,42,0	0/0:17,0:17:45.01:0,45,424	1/1:0,18:18:51.16:612,51,0	1/1:3,3:6:11.99:128,12,0	1/1:1,11:13:33.10:394,33,0	0/0:16,0:16:45.07:0,45,434	0/0:8,0:8:24.04:0,24,232	1/1:1,12:13:39.08:453,39,0	1/1:2,9:10:27.08:326,27,0	./.	1/1:1,5:6:18.03:203,18,0	1/1:5,9:11:24.07:287,24,0	1/1:2,18:20:57.17:675,57,0	1/1:2,9:11:24.07:288,24,0	0/0:23,0:23:51.06:0,51,487	1/1:2,16:17:45.14:541,45,0	1/1:0,14:13:36.11:433,36,0	1/1:0,15:14:42.13:504,42,0	1/1:1,12:13:39.12:468,39,0	1/1:2,17:19:54.15:637,54,0	1/1:0,11:12:33.10:397,33,0
chr10	41574869	.	CT	C	5789.83	PASS	AB=1.000;AC=33;AF=0.611;AN=54;BaseQRankSum=11.462;DP=587;FS=7.943;HRun=9;HaplotypeScore=94.7303;InbreedingCoeff=0.6086;MQ=76.07;MQ0=0;MQRankSum=-3.943;QD=14.55;ReadPosRankSum=3.100;VQSLOD=4.6111;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,25:29:74.07:664,74,0	0/0:13,0:13:36.11:0,36,415	0/0:28,0:27:69.17:0,69,762	0/0:15,0:15:24.02:0,24,253	1/1:7,29:35:58.42:784,58,0	0/0:29,2:31:29.21:0,29,777	0/0:23,2:25:38.69:0,39,670	1/1:33,0:33:23.53:335,24,0	0/0:26,1:27:17.36:0,17,689	1/1:21,0:21:48.54:259,49,0	0/1:26,0:26:16.71:241,0,17	1/1:21,0:21:0.56:251,1,0	0/0:28,0:28:77.92:0,78,870	1/1:2,18:20:54.02:493,54,0	1/1:13,0:13:34.91:204,35,0	1/1:4,14:18:48.01:434,48,0	./.	1/1:13,0:13:11.40:150,11,0	0/1:18,0:18:9.33:133,0,9	1/1:32,0:32:59.70:463,60,0	0/1:15,0:15:4.52:147,0,5	0/0:22,0:22:63.19:0,63,727	0/1:20,0:20:33.54:176,0,34	1/1:14,0:14:34.92:202,35,0	0/1:14,0:14:7.21:144,0,7	1/1:15,0:15:31.80:179,32,0	1/1:29,0:28:31.72:352,32,0	1/1:11,0:11:29.31:179,29,0
chr10	41574878	.	TC	T	10795.70	PASS	AB=1.000;AC=36;AF=0.667;AN=54;BaseQRankSum=9.086;DP=578;FS=4.469;HRun=1;HaplotypeScore=87.9026;InbreedingCoeff=0.9050;MQ=80.50;MQ0=0;MQRankSum=-5.345;QD=27.82;ReadPosRankSum=1.434;VQSLOD=4.7060;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:27:0.07:93,0,0	0/0:13,0:13:39.09:0,39,533	0/0:29,0:29:73.69:0,74,1049	0/0:12,0:12:31.28:0,31,336	0/1:33,0:32:1.82:138,0,2	0/0:30,0:30:62.86:0,63,998	0/0:23,0:23:58.68:0,59,846	1/1:0,30:30:87.24:1132,87,0	0/0:29,0:29:69.62:0,70,1002	1/1:2,16:18:54.17:728,54,0	1/1:8,22:30:69:833,69,0	1/1:5,17:22:54.29:762,54,0	0/0:30,0:30:77.92:0,78,1039	1/1:20,0:20:36.82:133,37,0	1/1:6,11:17:51.05:610,51,0	1/1:15,0:15:34.26:125,34,0	./.	1/1:3,10:13:39.08:486,39,0	1/1:1,14:15:39.06:500,39,0	1/1:3,27:30:84.23:1110,84,0	1/1:7,13:20:57.06:666,57,0	0/0:24,0:24:72.17:0,72,969	1/1:2,15:17:37.94:551,38,0	1/1:2,11:13:39.11:519,39,0	1/1:2,11:13:33.10:440,33,0	1/1:2,11:13:36.11:482,36,0	1/1:5,25:30:81.10:1022,81,0	1/1:2,10:12:36.10:466,36,0
chr10	41574954	.	CA	C	7738.92	PASS	AB=1.000;AC=51;AF=0.944;AN=54;BaseQRankSum=-0.791;DP=605;FS=3.747;HRun=1;HaplotypeScore=146.0472;InbreedingCoeff=0.6055;MQ=64.66;MQ0=17;MQRankSum=-3.930;QD=13.01;ReadPosRankSum=7.765;VQSLOD=3.8065;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:32,0:32:83.87:467,84,0	1/1:7,0:7:19.95:100,20,0	0/0:10,0:10:17.44:0,17,235	0/1:18,0:18:30.40:30,0,309	1/1:32,0:32:58.24:411,58,0	1/1:30,0:30:80.80:452,81,0	1/1:28,0:28:53.41:372,53,0	1/1:31,1:29:54.58:365,55,0	1/1:26,1:27:72.16:419,72,0	1/1:32,0:30:80.84:434,81,0	1/1:21,0:20:27.08:250,27,0	1/1:16,0:16:37.52:214,38,0	1/1:26,0:26:69.09:388,69,0	1/1:19,0:19:49.03:278,49,0	1/1:31,0:31:80.40:472,80,0	1/1:19,0:19:51.51:271,52,0	./.	1/1:14,0:14:40.62:230,41,0	1/1:19,0:14:8.24:134,8,0	1/1:31,2:26:43.96:341,44,0	1/1:31,0:31:77.63:423,78,0	1/1:20,0:20:54.42:283,54,0	1/1:16,0:15:35.26:215,35,0	1/1:22,0:22:46.05:260,46,0	1/1:14,0:10:25.68:133,26,0	1/1:26,0:26:72.70:364,73,0	1/1:18,0:18:48.60:251,49,0	1/1:12,0:11:31.88:181,32,0
chr10	41574955	.	AC	A	19805.98	PASS	AB=0.845;AC=52;AF=0.963;AN=54;BaseQRankSum=-5.266;DP=602;FS=2.112;HRun=2;HaplotypeScore=101.3565;InbreedingCoeff=0.0084;MQ=65.48;MQ0=17;MQRankSum=-4.248;QD=32.90;ReadPosRankSum=5.178;VQSLOD=4.6005;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,32:32:87.28:1129,87,0	1/1:0,7:7:21.07:273,21,0	0/1:10,1:11:13.02:13,0,142	0/1:12,5:17:99:118,0,210	1/1:1,30:31:84.26:1074,84,0	1/1:1,29:30:84.27:1089,84,0	1/1:0,27:27:78.25:1012,78,0	1/1:1,30:28:84.27:1085,84,0	1/1:1,26:27:75.24:971,75,0	1/1:2,30:30:90.25:1146,90,0	1/1:1,20:20:51.17:662,51,0	1/1:0,16:16:39.13:506,39,0	1/1:0,26:26:72.23:935,72,0	1/1:0,19:19:51.17:661,51,0	1/1:2,29:31:87.27:1114,87,0	1/1:0,19:19:54.18:700,54,0	./.	1/1:0,14:14:42.14:545,42,0	1/1:2,16:13:39.07:472,39,0	1/1:4,30:27:69.22:894,69,0	1/1:0,31:31:81.26:1051,81,0	1/1:0,20:20:57.19:740,57,0	1/1:2,14:15:42.11:517,42,0	1/1:2,20:22:51.15:647,51,0	1/1:0,14:10:27.09:351,27,0	1/1:0,26:26:78.25:1012,78,0	1/1:0,18:18:51.17:662,51,0	1/1:0,12:11:33.11:428,33,0
chr10	41575265	.	ACCC	A	3906.40	PASS	AB=0.669;AC=15;AF=0.278;AN=54;BaseQRankSum=14.140;DP=495;FS=18.156;HRun=3;HaplotypeScore=122.6972;InbreedingCoeff=-0.1366;MQ=76.93;MQ0=10;MQRankSum=-13.310;QD=17.84;ReadPosRankSum=2.851;VQSLOD=-0.3481;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,114,2734	0/0:10,0:10:30.10:0,30,710	0/0:26,0:26:75.07:0,75,1607	0/0:18,0:18:51.06:0,51,1149	0/0:25,0:25:72.25:0,72,1770	0/0:23,0:23:69.24:0,69,1639	0/0:28,0:28:84.29:0,84,2043	0/1:10,11:18:36.13:386,0,36	0/0:22,0:22:66.23:0,66,1625	0/1:8,14:18:99:428,0,186	0/1:11,22:30:99:633,0,162	0/1:3,1:3:26.46:26,0,77	0/0:32,0:32:96.33:0,96,2335	0/0:14,0:14:42.11:0,42,934	0/1:2,1:2:30.93:31,0,68	0/0:15,0:15:45.12:0,45,1056	./.	0/1:6,3:9:99:133,0,237	0/1:8,5:10:98:179,0,98	1/1:5,23:25:54.04:752,54,0	0/0:12,1:13:28.96:0,29,379	0/0:10,0:10:30.10:0,30,734	0/1:3,17:17:0.72:348,0,1	0/1:7,9:16:99:193,0,232	0/1:8,9:16:74.76:283,0,75	0/1:5,10:13:69.10:287,0,69	0/1:3,3:6:69.03:92,0,69	0/1:7,5:11:99:136,0,206
chr10	41575270	.	TA	T	1807.85	PASS	AB=0.689;AC=16;AF=0.296;AN=54;BaseQRankSum=14.857;DP=491;FS=27.047;HRun=2;HaplotypeScore=112.6558;InbreedingCoeff=-0.0681;MQ=72.69;MQ0=13;MQRankSum=-13.719;QD=8.22;ReadPosRankSum=2.082;VQSLOD=-0.2846;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,117,1693	0/0:9,0:9:27.09:0,27,404	0/0:23,0:23:60.19:0,60,830	0/0:17,0:17:47.99:0,48,650	0/0:25,0:25:75.25:0,75,1120	0/0:23,0:23:66.21:0,66,968	0/0:27,0:27:81.27:0,81,1195	0/1:10,11:18:62.30:206,0,62	0/0:23,0:23:69.22:0,69,1013	0/1:8,14:17:99:209,0,105	0/1:11,22:30:81.53:277,0,82	0/1:4,1:4:28.28:28,0,36	0/0:31,0:31:93.25:0,93,1365	0/0:12,0:12:33.04:0,33,467	0/1:4,1:3:14.05:14,0,39	0/0:15,0:15:42.14:0,42,619	./.	0/1:5,3:8:38.32:38,0,154	0/1:6,5:8:73.81:74,0,93	1/1:6,23:26:70.80:451,71,0	0/0:15,1:16:26.90:0,27,282	0/0:10,0:10:30.09:0,30,431	1/1:2,17:16:14.61:198,15,0	0/1:7,9:16:76.25:76,0,156	0/1:7,9:15:58.16:128,0,58	0/1:4,10:13:28.23:162,0,28	0/1:7,3:10:41.22:41,0,52	0/1:6,5:10:73.56:74,0,129
chr10	41575530	.	TC	T	6547.94	PASS	AB=0.600;AC=24;AF=0.462;AN=52;BaseQRankSum=8.067;DP=525;FS=33.596;HRun=2;HaplotypeScore=63.2843;InbreedingCoeff=0.5707;MQ=42.56;MQ0=79;MQRankSum=-0.244;QD=21.90;ReadPosRankSum=0.410;VQSLOD=2.9295;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:18:24.03:0,24,334	0/0:12,0:12:33.11:0,33,492	./.	./.	0/0:26,0:26:54.17:0,54,787	0/0:18,0:18:39.09:0,39,559	0/0:19,0:19:39.13:0,39,584	1/1:4,21:23:18.23:720,18,0	0/0:16,0:14:30.09:0,30,430	0/1:7,21:24:99:671,0,110	1/1:1,23:21:51.17:661,51,0	0/1:2,7:8:32.84:105,0,33	0/0:13,0:13:39.13:0,39,582	0/0:17,0:17:45.14:0,45,650	1/1:2,12:10:24.08:312,24,0	0/0:15,0:14:27.09:0,27,404	0/0:17,0:11:24.08:0,24,360	1/1:3,6:5:9.03:117,9,0	1/1:1,9:5:15.05:195,15,0	1/1:3,26:27:69.22:891,69,0	0/1:11,18:24:2.70:464,0,3	0/0:17,0:17:29.95:0,30,448	1/1:2,17:17:33.08:425,33,0	1/1:5,10:14:18.06:234,18,0	1/1:0,15:15:26.97:350,27,0	0/1:5,13:15:39.24:443,0,39	0/1:8,30:32:14.44:820,0,14	0/1:10,7:9:4.92:141,0,5
chr10	41575656	.	A	AT	1763.71	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-0.988;DP=499;FS=1.820;HRun=7;HaplotypeScore=53.6495;InbreedingCoeff=0.9883;MQ=63.04;MQ0=7;MQRankSum=-0.577;QD=21.00;ReadPosRankSum=1.052;VQSLOD=3.1167;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:80.61:0,81,761	0/0:8,0:8:24.03:0,24,226	0/0:10,0:10:17.98:0,18,160	0/0:13,0:12:26.09:0,26,214	0/0:22,0:22:60.09:0,60,579	0/0:25,0:25:60.08:0,60,579	0/0:11,0:11:30.05:0,30,290	0/0:30,0:29:78.12:0,78,753	0/0:12,0:12:33.05:0,33,319	1/1:4,19:15:36.11:433,36,0	1/1:6,15:20:39.12:471,39,0	0/0:14,0:12:36.06:0,36,348	0/0:22,0:22:60.10:0,60,579	0/0:20,0:20:51.08:0,51,492	1/1:2,18:18:42.09:491,42,0	0/0:22,0:22:51.07:0,51,493	0/0:21,0:21:51.08:0,51,493	1/1:0,9:9:24.07:290,24,0	0/0:15,0:15:39.06:0,39,376	0/0:23,0:22:54.08:0,54,521	0/0:15,0:15:45.07:0,45,434	0/0:12,0:12:33.05:0,33,317	0/0:25,0:24:60.09:0,60,579	0/0:11,0:11:33.05:0,33,319	1/1:1,9:10:21.06:253,21,0	0/0:20,0:16:42.07:0,42,406	0/0:27,0:23:63.10:0,63,608	0/0:5,0:5:12.02:0,12,116
chr10	41576005	.	GCTTA	G	3109.46	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=11.399;DP=772;FS=0.508;HRun=0;HaplotypeScore=166.9453;InbreedingCoeff=0.9989;MQ=84.50;MQ0=0;MQRankSum=-9.854;QD=44.42;ReadPosRankSum=0.101;VQSLOD=4.0738;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,37:41:93.19:1735,93,0	0/0:8,0:8:24.08:0,24,668	0/0:29,0:29:87.30:0,87,2343	0/0:24,0:24:66.18:0,66,1521	0/0:21,0:21:63.20:0,63,1654	0/0:28,0:28:84.29:0,84,2303	0/0:32,0:32:93.32:0,93,2523	0/0:31,0:31:90.31:0,90,2473	0/0:29,0:29:87.30:0,87,2388	0/0:20,0:20:60.21:0,60,1630	0/0:22,0:22:66.23:0,66,1796	0/0:20,0:20:60.21:0,60,1674	0/0:23,0:23:69.24:0,69,1906	0/0:27,0:27:78.27:0,78,2156	0/0:41,0:41:99:0,123,3395	1/1:2,27:29:75.26:1496,75,0	0/0:29,0:29:87.26:0,87,2290	0/0:15,0:15:45.11:0,45,1163	0/0:24,0:24:66.22:0,66,1784	0/0:37,0:37:99:0,111,3060	0/0:36,0:36:99:0,102,2839	0/0:28,0:28:84.29:0,84,2347	0/0:32,0:32:96.33:0,96,2636	0/0:41,0:41:99:0,120,3314	0/0:28,0:28:84.29:0,84,2340	0/0:25,0:25:75.26:0,75,2053	0/0:37,0:37:99:0,111,2936	0/0:15,0:15:45.10:0,45,1054
chr10	41576736	.	AT	A	7701.08	PASS	AB=1.000;AC=31;AF=0.554;AN=56;BaseQRankSum=13.929;DP=439;FS=0.766;HRun=4;HaplotypeScore=80.9719;InbreedingCoeff=0.9311;MQ=56.93;MQ0=0;MQRankSum=-6.128;QD=30.68;ReadPosRankSum=-2.288;VQSLOD=4.0472;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:45.15:0,45,630	0/0:7,0:7:21.07:0,21,294	0/0:3,0:2:3.01:0,3,42	0/1:6,0:6:1.70:2,0,75	0/0:34,0:34:99:0,102,1428	0/0:21,0:20:63.20:0,63,867	0/0:10,0:10:27.09:0,27,378	1/1:3,20:23:60.18:720,60,0	0/0:18,0:18:51.17:0,51,714	1/1:0,20:20:60.18:720,60,0	1/1:4,20:22:57.17:682,57,0	1/1:0,14:14:42.13:504,42,0	0/0:12,0:12:36.12:0,36,504	0/0:14,0:14:39.13:0,39,540	1/1:2,12:14:36.11:432,36,0	0/0:21,0:21:63.21:0,63,882	0/0:22,0:22:63.21:0,63,882	1/1:1,8:9:24.07:288,24,0	1/1:2,16:18:48.15:576,48,0	1/1:1,23:23:63.19:755,63,0	1/1:1,9:10:24.07:288,24,0	0/0:9,0:9:27.08:0,27,361	1/1:0,12:12:30.09:360,30,0	1/1:2,10:12:27.08:324,27,0	1/1:0,17:17:39.12:468,39,0	1/1:0,17:17:51.16:614,51,0	1/1:1,17:18:48.15:576,48,0	1/1:2,11:13:33.10:396,33,0
chr10	41576771	.	T	TATTG	13804.30	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=12.659;DP=469;FS=2.696;HRun=0;HaplotypeScore=98.1500;InbreedingCoeff=0.9800;MQ=60.87;MQ0=0;MQRankSum=-13.940;QD=52.49;ReadPosRankSum=-0.357;VQSLOD=5.6214;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:39.11:0,39,642	0/0:7,0:7:21.06:0,21,342	0/0:7,0:7:20.30:0,20,248	0/0:11,0:11:14.97:0,15,203	0/0:31,0:31:84.27:0,84,1478	0/0:15,0:15:42.14:0,42,754	0/0:12,0:12:27.07:0,27,404	1/1:16,15:31:72.16:1472,72,0	0/0:17,0:17:45.15:0,45,776	1/1:8,14:23:63.17:1487,63,0	1/1:4,15:18:41.92:897,42,0	1/1:3,15:18:45.14:1074,45,0	0/0:17,0:17:51.17:0,51,915	0/0:17,0:17:39.08:0,39,665	1/1:1,13:15:33.11:846,33,0	0/0:18,0:18:51.17:0,51,916	0/0:34,0:34:93.24:0,93,1522	1/1:2,7:9:21:480,21,0	1/1:7,7:14:36.05:731,36,0	1/1:5,19:22:51.17:1253,51,0	1/1:3,1:4:11.96:173,12,0	0/0:4,0:4:9.03:0,9,162	1/1:5,7:12:27.01:620,27,0	1/1:1,7:10:18.06:439,18,0	1/1:2,21:24:57.20:1395,57,0	1/1:6,16:22:56.85:1326,57,0	1/1:5,23:30:54.17:1334,54,0	1/1:4,3:7:15.01:277,15,0
chr10	41576969	.	TTGAC	T	1050.85	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=1.472;DP=533;FS=0.000;HRun=0;HaplotypeScore=103.6828;InbreedingCoeff=0.9561;MQ=66.58;MQ0=0;MQRankSum=-1.198;QD=37.53;ReadPosRankSum=1.978;VQSLOD=3.7869;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,126,3144	0/0:8,0:8:24.08:0,24,629	0/0:11,0:10:30.10:0,30,735	0/0:23,0:22:60.21:0,60,1488	0/0:18,0:18:51.18:0,51,1335	0/0:21,0:21:57.20:0,57,1427	0/0:13,0:13:36.09:0,36,834	0/0:23,0:23:63.22:0,63,1600	0/0:24,0:24:66.23:0,66,1723	0/0:20,0:20:51.17:0,51,1245	0/0:13,0:13:39.13:0,39,1021	0/0:25,0:25:75.26:0,75,1863	0/0:12,0:12:33.11:0,33,833	0/0:18,0:18:54.19:0,54,1407	0/0:16,0:16:39.13:0,39,992	0/0:19,0:19:54.19:0,54,1385	1/1:5,23:28:63.22:1146,63,0	0/0:18,0:18:54.19:0,54,1342	0/0:16,0:16:39.13:0,39,1022	0/0:15,0:15:39.13:0,39,977	0/0:34,0:34:99:0,99,2562	0/0:6,0:6:18.06:0,18,472	0/0:6,0:6:12.04:0,12,314	0/0:32,0:32:87.26:0,87,2172	0/0:24,0:24:63.22:0,63,1649	0/0:15,0:15:39.13:0,39,992	0/0:22,0:22:63.22:0,63,1648	0/0:8,0:8:21.07:0,21,550
chr10	41577094	.	GAATA	G	1412.19	PASS	AC=4;AF=0.074;AN=54;BaseQRankSum=-1.134;DP=369;FS=3.479;HRun=0;HaplotypeScore=104.3887;InbreedingCoeff=0.7325;MQ=62.10;MQ0=0;MQRankSum=1.050;QD=28.82;ReadPosRankSum=2.676;VQSLOD=3.1197;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,25:32:17.57:1005,18,0	0/0:4,0:4:9.03:0,9,202	0/0:10,0:7:8.99:0,9,159	0/0:13,0:10:5.70:0,6,152	0/0:27,0:27:69.19:0,69,1592	0/0:22,0:22:54.15:0,54,1239	0/0:10,0:10:21.07:0,21,534	0/0:25,0:25:51.10:0,51,571	0/0:15,0:15:39.13:0,39,915	0/0:8,0:8:21.01:0,21,220	0/0:5,0:5:11.95:0,12,116	0/0:6,0:6:11.99:0,12,122	0/0:11,0:11:18.06:0,18,457	0/0:6,0:6:18.06:0,18,431	0/0:8,0:8:18.04:0,18,194	1/1:0,17:17:30.10:525,30,0	0/0:34,0:34:93.26:0,93,2192	0/0:16,0:16:36.02:0,36,425	0/0:13,0:13:27.08:0,27,306	0/0:9,0:9:15.04:0,15,169	0/0:2,0:2:3.01:0,3,34	./.	0/0:7,0:7:14.92:0,15,139	0/0:2,0:2:6.02:0,6,68	0/0:18,0:18:33.03:0,33,358	0/0:19,0:19:51.09:0,51,579	0/0:22,0:22:54.10:0,54,618	0/0:8,0:8:15.04:0,15,170
chr10	41577105	.	TA	T	4485.16	PASS	AB=1.000;AC=33;AF=0.589;AN=56;BaseQRankSum=14.079;DP=323;FS=22.223;HRun=5;HaplotypeScore=66.5583;InbreedingCoeff=0.7249;MQ=59.55;MQ0=0;MQRankSum=-9.089;QD=22.31;ReadPosRankSum=-0.407;VQSLOD=3.0719;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:29:5.10:5,0,99	0/0:4,0:4:12.04:0,12,164	0/0:6,0:3:3.01:0,3,41	0/1:10,0:7:3.84:4,0,110	0/0:22,0:22:66.22:0,66,901	0/0:19,0:19:57.19:0,57,778	0/0:9,0:9:27.09:0,27,369	1/1:1,22:23:69.19:773,69,0	0/0:14,0:14:39.13:0,39,533	1/1:0,8:8:24.07:272,24,0	1/1:0,6:6:15.04:170,15,0	1/1:0,4:4:12.03:136,12,0	0/0:7,0:7:21.06:0,21,271	0/0:6,0:6:18.06:0,18,246	1/1:1,5:6:15.04:170,15,0	0/1:17,0:17:5.99:6,0,33	0/0:34,0:34:99:0,102,1362	1/1:2,12:14:33.09:374,33,0	1/1:0,10:10:30.09:340,30,0	1/1:2,6:8:21.06:234,21,0	1/1:0,1:1:3.01:34,3,0	0/0:1,0:1:3.01:0,3,40	1/1:1,5:6:12.03:136,12,0	1/1:0,2:2:6.02:68,6,0	1/1:0,12:12:36.10:406,36,0	1/1:1,17:18:51.14:577,51,0	1/1:2,17:19:51.14:578,51,0	1/1:1,7:8:18.05:203,18,0
chr10	41577116	.	T	TATTA	9266.38	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=3.051;DP=369;FS=22.733;HRun=0;HaplotypeScore=82.0405;InbreedingCoeff=0.9226;MQ=68.04;MQ0=0;MQRankSum=-12.377;QD=50.36;ReadPosRankSum=-3.068;VQSLOD=2.9998;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:63.18:0,63,1088	0/0:5,0:5:12.04:0,12,214	0/0:8,0:7:15.02:0,15,171	0/0:11,0:9:9.24:0,9,128	0/0:22,0:22:60.19:0,60,1034	0/0:19,0:19:48.16:0,48,854	0/0:9,0:9:27.05:0,27,396	1/1:10,16:31:72.22:1688,72,0	0/0:17,0:17:42.12:0,42,691	1/1:3,9:13:30.08:718,30,0	1/1:1,6:9:15.05:362,15,0	1/1:2,3:5:15.04:332,15,0	0/0:8,0:8:18.06:0,18,317	0/0:6,0:6:18.06:0,18,317	1/1:3,5:10:15.05:385,15,0	0/0:14,0:14:30.10:0,30,534	0/0:34,0:34:96.21:0,96,1582	1/1:7,9:18:27.06:626,27,0	1/1:8,7:15:30.97:674,31,0	1/1:1,7:8:21.07:497,21,0	1/1:2,1:4:3.01:54,3,0	0/0:6,0:6:12.01:0,12,157	1/1:3,3:7:9.03:231,9,0	1/1:0,2:2:6.02:154,6,0	1/1:4,10:15:33.11:816,33,0	1/1:3,15:20:51.12:1236,51,0	1/1:4,15:20:51.15:1181,51,0	1/1:3,4:7:13.29:312,13,0
chr10	41577933	.	C	CA	68.86	PASS	AB=0.571;AC=3;AF=0.054;AN=56;BaseQRankSum=-1.250;DP=527;FS=0.000;HRun=2;HaplotypeScore=76.8329;InbreedingCoeff=0.5886;MQ=60.71;MQ0=0;MQRankSum=-0.631;QD=7.65;ReadPosRankSum=-2.031;VQSLOD=0.1129;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,4:5:9.03:129,9,0	0/0:12,0:12:36.11:0,36,445	0/0:14,0:14:41.33:0,41,471	0/0:9,0:9:24.06:0,24,265	0/0:36,0:36:99:0,105,1254	0/0:17,0:17:51.13:0,51,606	0/0:15,0:15:45.14:0,45,558	0/0:39,0:39:99:0,111,1347	0/0:20,0:20:60.19:0,60,743	0/0:24,0:24:69.15:0,69,820	0/0:26,0:26:60.18:0,60,733	0/0:9,0:9:27.08:0,27,334	0/0:12,0:12:36.11:0,36,446	0/0:17,0:17:51.15:0,51,619	0/0:14,0:14:33.10:0,33,409	0/1:1,3:3:31.16:37,0,31	0/0:27,0:27:78.25:0,78,967	0/0:27,0:27:78.22:0,78,950	0/0:14,0:13:36.11:0,36,436	0/0:31,0:31:90.28:0,90,1113	0/0:6,0:6:18.06:0,18,223	0/0:17,0:17:51.14:0,51,618	0/0:25,0:25:72.22:0,72,881	0/0:11,0:11:30.09:0,30,372	0/0:22,0:22:60.17:0,60,729	0/0:26,0:26:75.24:0,75,928	0/0:38,0:38:99:0,105,1301	0/0:10,0:10:24.08:0,24,297
chr10	41578108	.	G	GT	475.94	PASS	AB=0.976;AC=20;AF=0.385;AN=52;BaseQRankSum=10.701;DP=436;FS=4.279;HRun=1;HaplotypeScore=129.0427;InbreedingCoeff=0.6739;MQ=57.24;MQ0=2;MQRankSum=-10.627;QD=3.13;ReadPosRankSum=-1.929;VQSLOD=-0.5880;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/0:10,0:10:30.10:0,30,389	0/0:19,0:18:45.14:0,45,576	0/0:32,0:31:80.93:0,81,1007	0/0:20,0:20:60.18:0,60,757	0/0:20,0:20:60.19:0,60,777	0/0:27,0:27:78.23:0,78,984	1/1:18,2:16:19.24:102,19,0	0/0:18,0:18:54.18:0,54,699	1/1:18,1:18:22.83:130,23,0	0/0:17,0:14:13.36:0,13,39	0/0:11,0:11:3.11:0,3,12	0/0:24,0:24:72.19:0,72,901	0/0:18,0:18:54.15:0,54,673	0/0:15,0:13:6.27:0,6,29	./.	0/0:24,0:24:72.19:0,72,900	1/1:6,1:7:7.18:52,7,0	1/1:11,1:9:7.47:63,7,0	1/1:13,1:13:2.33:91,2,0	1/1:1,1:2:2.97:20,3,0	0/0:20,0:20:57.18:0,57,734	0/1:19,1:19:5.67:73,0,6	0/0:7,2:9:3.04:0,3,8	0/1:11,0:10:5.67:17,0,6	1/1:24,0:23:11.98:66,12,0	1/1:15,0:15:5.26:29,5,0	1/1:8,0:8:4.14:11,4,0
chr10	41578204	.	A	AC	3119.10	PASS	AB=0.647;AC=29;AF=0.558;AN=52;BaseQRankSum=15.356;DP=435;FS=49.110;HRun=1;HaplotypeScore=126.3309;InbreedingCoeff=0.8531;MQ=46.25;MQ0=27;MQRankSum=-15.319;QD=18.57;ReadPosRankSum=-1.075;VQSLOD=0.3503;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	0/0:15,0:15:45.15:0,45,584	0/0:33,0:10:24.04:0,24,274	0/0:26,0:11:15.09:0,15,295	0/0:26,0:26:78.25:0,78,1013	0/0:27,0:27:78.25:0,78,1013	0/0:32,0:32:96.27:0,96,1202	1/1:7,0:5:14.20:70,14,0	0/0:19,0:19:57.19:0,57,739	1/1:6,6:12:29.24:240,29,0	1/1:6,10:15:17.82:353,18,0	1/1:11,6:14:36.03:368,36,0	0/0:30,0:29:87.27:0,87,1115	0/0:23,0:23:69.19:0,69,866	1/1:8,14:20:54.01:524,54,0	./.	0/0:18,0:18:54.18:0,54,701	1/1:2,1:3:3:30,3,0	1/1:10,2:11:30.55:232,31,0	1/1:7,10:14:38.81:383,39,0	1/1:4,3:5:5.96:52,6,0	0/0:18,0:18:54.17:0,54,692	0/1:5,6:11:6.24:192,0,6	1/1:7,1:8:8.77:92,9,0	1/1:6,4:9:23.89:249,24,0	1/1:4,5:9:20.63:178,21,0	1/1:9,6:14:41.08:325,41,0	1/1:2,0:1:3.01:36,3,0
chr10	41578205	.	CAGGG	C	2111.19	PASS	AB=0.763;AC=15;AF=0.288;AN=52;BaseQRankSum=6.770;DP=419;FS=34.866;HRun=0;HaplotypeScore=135.8750;InbreedingCoeff=-0.2517;MQ=47.09;MQ0=27;MQRankSum=-9.829;QD=15.08;ReadPosRankSum=-2.475;VQSLOD=1.3746;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/0:15,0:15:45.15:0,45,1304	0/0:34,0:11:33.10:0,33,850	0/0:25,0:10:28.34:0,28,774	0/0:26,0:26:78.27:0,78,2222	0/0:27,0:27:81.28:0,81,2307	0/0:34,0:34:99:0,102,2757	0/1:2,6:6:29.68:296,0,30	0/0:19,0:19:57.20:0,57,1652	0/1:7,5:12:99:286,0,140	0/1:10,4:13:99:134,0,157	0/1:7,7:11:99:176,0,210	0/0:30,0:29:87.30:0,87,2489	0/0:23,0:23:69.22:0,69,1933	0/1:16,4:18:99:165,0,402	./.	0/0:19,0:19:57.20:0,57,1635	0/1:4,0:4:10.71:11,0,74	0/1:4,4:7:48.20:239,0,48	0/1:11,4:13:99:177,0,153	0/1:6,1:5:53.39:53,0,57	0/0:18,0:18:54.19:0,54,1541	0/0:8,0:9:26.52:0,27,241	0/1:4,1:5:4.42:4,0,106	0/1:4,3:6:81.86:139,0,82	0/1:7,2:9:99:124,0,160	0/1:6,7:13:96.64:405,0,97	1/1:0,2:1:3.01:53,3,0
chr10	41578206	.	A	AATTATCTGTAG	16309.05	PASS	AC=30;AF=0.577;AN=52;BaseQRankSum=15.414;DP=457;FS=51.603;HRun=0;HaplotypeScore=165.8151;InbreedingCoeff=0.9826;MQ=47.11;MQ0=27;MQRankSum=-14.955;QD=86.29;ReadPosRankSum=-2.043;VQSLOD=2.4453;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/0:15,0:15:45.15:0,45,1653	0/0:33,0:11:30:0,30,832	0/0:26,0:11:29.59:0,30,901	0/0:26,0:26:78.25:0,78,2821	0/0:27,0:27:78.27:0,78,2812	0/0:32,0:32:93.31:0,93,3112	1/1:13,0:11:30.09:866,30,0	0/0:19,0:19:57.20:0,57,2059	1/1:9,6:14:42.14:1491,42,0	1/1:7,9:15:42.09:1695,42,0	1/1:10,6:12:36.08:1266,36,0	0/0:30,0:29:87.28:0,87,2932	0/0:22,0:22:66.23:0,66,2384	1/1:7,14:19:54.14:2139,54,0	./.	0/0:20,0:20:57.17:0,57,2024	1/1:6,1:7:12.01:492,12,0	1/1:7,2:8:21.07:558,21,0	1/1:8,11:15:42.10:1600,42,0	1/1:10,3:9:18.06:684,18,0	0/0:18,0:18:54.18:0,54,1868	1/1:2,7:10:30.10:1438,30,0	1/1:5,1:6:11.97:242,12,0	1/1:5,4:7:18.06:573,18,0	1/1:9,5:13:36.09:1400,36,0	1/1:9,6:14:42.14:1373,42,0	1/1:5,0:4:12.04:492,12,0
chr10	41578479	.	A	ATG	1875.38	PASS	AB=0.588;AC=23;AF=0.500;AN=46;BaseQRankSum=9.645;DP=411;FS=19.719;HRun=0;HaplotypeScore=73.9974;InbreedingCoeff=0.7591;MQ=49.99;MQ0=21;MQRankSum=-10.169;QD=13.40;ReadPosRankSum=-1.164;VQSLOD=1.6712;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/0:19,0:19:54.17:0,54,724	0/0:18,0:10:11.73:0,12,115	0/0:9,0:2:3.01:0,3,40	0/0:22,0:22:60.20:0,60,819	0/0:30,0:30:78.23:0,78,1036	0/0:27,0:26:66.21:0,66,888	1/1:2,9:9:17.91:218,18,0	0/0:26,0:26:72.22:0,72,970	1/1:3,7:6:15.05:258,15,0	1/1:2,11:5:6.02:106,6,0	1/1:2,11:10:15.05:265,15,0	0/0:22,0:22:63.19:0,63,841	0/0:23,0:23:66.21:0,66,890	1/1:7,9:10:15.05:260,15,0	./.	0/0:27,0:27:69.21:0,69,928	1/1:2,4:4:3.01:53,3,0	./.	1/1:2,10:9:12.04:212,12,0	./.	0/0:30,0:30:84.27:0,84,1137	1/1:4,11:5:6.02:106,6,0	1/1:3,4:5:3.01:53,3,0	1/1:1,10:6:9.03:149,9,0	1/1:3,9:9:15.52:266,16,0	0/1:3,7:8:27.60:113,0,28	./.
chr10	41579303	.	AAAAGAG	A	4377.63	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=7.658;DP=432;FS=11.887;HRun=0;HaplotypeScore=132.8923;InbreedingCoeff=0.8791;MQ=64.27;MQ0=5;MQRankSum=-7.101;QD=28.61;ReadPosRankSum=1.189;VQSLOD=3.9692;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:65.91:0,66,1825	0/0:10,0:10:21.07:0,21,658	0/0:42,0:18:5.36:0,5,378	0/0:59,0:35:60.87:0,61,1092	0/0:17,0:17:39.87:0,40,467	0/0:22,0:22:60.16:0,60,1761	0/0:20,0:20:54.11:0,54,1658	1/1:14,7:13:26.88:372,27,0	0/0:14,0:14:36.07:0,36,960	1/1:4,13:17:48.15:912,48,0	1/1:5,4:9:12.03:170,12,0	1/1:9,0:6:5.99:68,6,0	0/0:12,0:12:36.10:0,36,939	0/0:8,0:8:21.04:0,21,354	1/1:4,10:14:30.08:559,30,0	0/0:16,0:16:42.07:0,42,1211	0/0:13,0:13:30.10:0,30,862	1/1:0,4:4:6.02:123,6,0	1/1:5,1:5:12.01:147,12,0	1/1:5,9:14:9.01:172,9,0	1/1:6,2:8:1.37:19,1,0	0/0:12,0:12:33.08:0,33,791	1/1:9,0:9:14.98:147,15,0	0/0:8,0:7:0.89:0,1,2	1/1:6,4:10:18.01:276,18,0	1/1:5,9:12:33.06:647,33,0	1/1:4,8:12:21.07:439,21,0	1/1:2,4:6:18.04:327,18,0
chr10	41579305	.	AAGAGAAAG	A	1821.70	PASS	AB=0.967;AC=25;AF=0.446;AN=56;BaseQRankSum=8.985;DP=431;FS=12.413;HRun=0;HaplotypeScore=153.2311;InbreedingCoeff=0.6964;MQ=64.50;MQ0=6;MQRankSum=-7.309;QD=12.14;ReadPosRankSum=1.367;VQSLOD=1.4605;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:64.72:0,65,2041	0/0:9,0:9:21.07:0,21,681	0/0:41,0:18:12.41:0,12,441	0/0:66,0:36:55.84:0,56,1200	0/0:17,0:17:39.87:0,40,677	0/0:21,0:21:60.09:0,60,2047	0/0:20,0:20:54.11:0,54,1893	0/1:20,0:13:24.07:133,0,24	0/0:12,0:12:36.07:0,36,1155	1/1:16,0:16:44.75:315,45,0	1/1:8,0:8:7.74:38,8,0	1/1:4,6:6:9:162,9,0	0/0:12,0:12:36.10:0,36,1098	0/0:8,0:8:21.04:0,21,459	1/1:14,0:14:29.15:234,29,0	0/0:16,0:16:42.07:0,42,1439	0/0:13,0:13:30.10:0,30,914	1/1:4,0:4:5.82:34,6,0	1/1:6,0:5:12:105,12,0	0/1:14,0:14:23.82:58,0,24	1/1:8,0:8:1.34:19,1,0	0/0:11,0:11:33.08:0,33,913	1/1:5,4:9:15.02:249,15,0	0/0:3,5:7:0.89:0,1,2	0/1:8,1:9:6.28:125,0,6	1/1:14,0:12:32.66:265,33,0	1/1:12,0:12:20.63:167,21,0	1/1:6,0:6:16.69:126,17,0
chr10	41579311	.	AAG	A	696.66	PASS	AB=1.000;AC=28;AF=0.519;AN=54;BaseQRankSum=7.799;DP=444;FS=8.084;HRun=0;HaplotypeScore=120.3649;InbreedingCoeff=0.6325;MQ=62.64;MQ0=15;MQRankSum=-5.105;QD=4.20;ReadPosRankSum=3.216;VQSLOD=1.5808;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:25:60.03:0,60,933	0/0:8,0:8:21.07:0,21,342	0/0:54,0:14:9.31:0,9,234	0/0:80,0:37:44.09:0,44,605	1/1:6,12:18:27.09:334,27,0	0/0:20,1:21:19.69:0,20,826	0/0:19,0:19:48.16:0,48,776	1/1:17,0:10:8.51:33,9,0	0/0:12,0:12:24.08:0,24,395	1/1:15,0:15:21.15:89,21,0	1/1:7,0:7:1.36:3,1,0	1/1:9,0:5:2.88:16,3,0	0/0:12,0:12:24.08:0,24,396	1/1:2,5:7:12.04:150,12,0	1/1:14,0:14:17.06:65,17,0	0/0:15,0:15:33.11:0,33,544	0/0:11,0:11:21.07:0,21,339	1/1:4,0:4:1.89:10,2,0	0/1:7,0:5:5.38:5,0,14	1/1:13,0:13:1.89:10,2,0	0/1:8,0:8:0.04:0,0,0	0/0:13,0:13:24.07:0,24,371	1/1:8,0:8:1.45:3,1,0	./.	1/1:9,0:9:7.89:33,8,0	0/1:14,0:12:11.19:64,0,11	1/1:10,0:10:9.31:42,9,0	0/1:6,0:6:1.53:22,0,2
chr10	41579329	.	CAG	C	1506.17	PASS	AB=0.774;AC=22;AF=0.423;AN=52;BaseQRankSum=8.633;DP=477;FS=15.720;HRun=0;HaplotypeScore=125.5438;InbreedingCoeff=0.6524;MQ=54.10;MQ0=36;MQRankSum=-7.191;QD=6.78;ReadPosRankSum=0.118;VQSLOD=2.1396;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:24:25.76:0,26,530	0/0:8,0:8:12:0,12,160	0/0:75,0:11:4.57:0,5,55	0/1:104,1:23:0.63:1,0,181	0/0:24,0:23:21.06:0,21,303	0/0:22,0:22:57.17:0,57,881	0/0:20,0:20:45.08:0,45,701	1/1:5,10:4:12.04:153,12,0	0/0:8,0:8:21.07:0,21,351	0/1:6,8:14:10.32:308,0,10	0/1:3,4:6:0:0,0,0	0/0:8,0:4:6.01:0,6,73	0/0:9,0:9:21.07:0,21,351	0/0:12,0:8:12.04:0,12,167	1/1:5,6:11:15.03:182,15,0	0/0:14,0:14:33.11:0,33,547	0/0:9,0:8:6.85:0,7,60	0/1:4,1:5:29.99:30,0,74	1/1:4,6:3:6.01:63,6,0	1/1:7,6:13:8.24:83,8,0	1/1:4,1:8:3.83:20,4,0	0/0:11,0:11:18.06:0,18,297	./.	./.	1/1:1,5:6:11.99:123,12,0	1/1:4,7:11:21.07:267,21,0	1/1:1,9:10:24.01:271,24,0	1/1:1,5:6:15.05:191,15,0
chr10	41579345	.	CAGAGAGAGAG	C	1954.26	PASS	AB=0.794;AC=21;AF=0.389;AN=54;BaseQRankSum=7.014;DP=459;FS=9.601;HRun=0;HaplotypeScore=155.4264;InbreedingCoeff=0.3939;MQ=36.21;MQ0=62;MQRankSum=-7.210;QD=7.49;ReadPosRankSum=-1.601;VQSLOD=1.2324;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:21,0:22:37.91:38,0,168	0/0:3,0:3:6.02:0,6,259	0/0:55,0:4:5.21:0,5,64	0/1:103,0:9:0.77:1,0,20	0/0:15,0:24:18.04:0,18,297	0/0:19,0:20:48.15:0,48,1712	0/0:16,0:17:45.08:0,45,1163	0/1:16,0:9:13.82:14,0,49	0/0:9,0:8:24.07:0,24,642	1/1:9,4:14:32.37:618,32,0	0/1:6,1:6:0:0,0,0	1/1:3,5:3:5.85:54,6,0	0/0:6,0:7:18.06:0,18,603	0/0:3,0:6:8.70:0,9,159	1/1:7,1:9:2.06:107,2,0	0/0:11,0:13:24.91:0,25,346	0/0:7,0:6:8.58:0,9,240	1/1:5,1:6:13.50:166,14,0	0/0:11,0:5:9.32:0,9,65	0/1:8,2:13:39.27:99,0,39	1/1:10,0:11:11.73:138,12,0	0/0:10,0:10:20.65:0,21,675	0/0:1,2:2:0:0,0,0	./.	1/1:8,1:9:8.98:138,9,0	1/1:7,1:9:14.25:205,14,0	0/1:4,5:11:25.92:320,0,26	0/1:3,3:8:90.25:230,0,90
chr10	41579355	.	G	GACCC	1800.18	PASS	AB=0.928;AC=18;AF=0.333;AN=54;BaseQRankSum=6.615;DP=482;FS=27.744;HRun=0;HaplotypeScore=144.4772;InbreedingCoeff=0.1874;MQ=33.32;MQ0=71;MQRankSum=-7.159;QD=12.59;ReadPosRankSum=-0.040;VQSLOD=1.5832;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:21:21.41:21,0,106	0/0:5,0:5:7.27:0,7,123	0/0:56,0:3:1.42:0,1,68	0/0:111,0:7:1.85:0,2,24	0/0:25,0:24:18.04:0,18,257	0/0:21,0:21:48.16:0,48,950	0/0:19,0:19:44.48:0,44,848	0/0:23,0:8:20.67:0,21,240	0/0:9,0:8:24.07:0,24,442	1/1:9,3:12:9.37:492,9,0	1/1:6,3:8:2.67:39,3,0	0/1:9,0:4:30.87:31,0,97	0/0:7,0:7:18.06:0,18,334	0/0:11,0:6:8.91:0,9,77	1/1:7,1:8:14.72:227,15,0	0/0:13,0:13:9.62:0,10,307	0/0:8,0:6:15:0,15,198	1/1:5,1:6:11.83:201,12,0	0/0:10,0:4:6.65:0,7,95	0/1:13,0:12:45.84:72,0,46	0/1:10,3:12:21.58:110,0,22	0/0:12,0:12:24.08:0,24,477	1/1:8,0:7:1.25:3,1,0	./.	0/1:10,3:13:1.98:109,0,2	0/1:8,1:8:28.51:237,0,29	0/1:8,1:9:15.68:238,0,16	0/1:8,0:8:71.44:183,0,71
chr10	41579365	.	GACCC	G	1129.59	PASS	AB=0.970;AC=28;AF=0.519;AN=54;BaseQRankSum=5.727;DP=428;FS=8.175;HRun=0;HaplotypeScore=139.4939;InbreedingCoeff=-0.0020;MQ=31.63;MQ0=71;MQRankSum=-5.591;QD=3.57;ReadPosRankSum=0.248;VQSLOD=1.8349;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:16,6:19:2.21:186,0,2	0/1:5,0:5:35.63:36,0,128	0/0:38,4:2:4.57:0,5,63	0/1:84,7:2:0:0,0,0	0/1:21,0:21:12.12:15,0,12	0/0:20,0:20:45.14:0,45,1050	0/0:20,0:20:18.31:0,18,775	0/1:18,0:8:19.51:20,0,94	0/0:9,0:8:15.03:0,15,277	1/1:13,0:12:26.56:271,27,0	0/1:10,0:9:0.05:0,0,0	0/1:7,2:4:4.44:46,0,4	0/1:6,0:6:15.73:16,0,323	0/1:10,0:5:1.99:16,0,2	0/1:7,0:7:1.76:2,0,2	1/1:8,3:11:1.48:208,1,0	0/1:9,0:8:37.70:38,0,48	0/1:6,0:6:2.97:77,0,3	0/1:6,0:3:23.82:72,0,24	1/1:14,0:13:3.21:41,3,0	1/1:11,3:13:1.23:23,1,0	0/0:10,0:10:18.02:0,18,443	0/1:9,0:8:0:0,0,0	./.	1/1:9,0:10:5.95:42,6,0	0/1:8,0:7:47.72:48,0,75	0/1:9,0:9:0.50:21,0,1	1/1:6,1:7:3.13:95,3,0
chr10	41579367	.	CCCAG	C	1095.55	PASS	AB=0.964;AC=29;AF=0.558;AN=52;BaseQRankSum=7.273;DP=415;FS=34.320;HRun=0;HaplotypeScore=139.2304;InbreedingCoeff=0.0760;MQ=29.09;MQ0=73;MQRankSum=-6.239;QD=5.45;ReadPosRankSum=1.716;VQSLOD=1.0871;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:19:35.04:111,0,35	0/1:5,0:5:24.89:25,0,89	0/0:39,0:2:4.26:0,4,59	./.	0/0:18,2:20:5.16:0,5,42	0/0:20,0:20:45.10:0,45,903	0/0:20,0:20:33.36:0,33,753	0/1:18,0:8:65.62:66,0,102	0/0:7,0:6:15.01:0,15,264	1/1:11,2:12:28.20:218,28,0	0/1:10,0:9:0.05:0,0,0	1/1:8,0:4:3.89:36,4,0	0/1:5,1:6:24.23:24,0,229	0/1:10,0:5:24.58:25,0,25	1/1:7,0:7:7.62:33,8,0	0/1:9,0:9:22.07:133,0,22	1/1:9,0:8:1.50:90,2,0	1/1:6,0:6:14.36:88,14,0	0/1:5,1:3:33.57:61,0,34	1/1:14,0:13:3.66:94,4,0	1/1:14,0:13:0.02:15,0,0	0/0:8,1:10:18.02:0,18,461	0/1:9,0:8:0:0,0,0	./.	1/1:10,1:11:7.82:35,8,0	0/1:7,1:7:74.21:74,0,77	1/1:9,0:9:2.38:34,2,0	0/1:7,0:7:1.08:87,0,1
chr10	41579369	.	CAGAG	C	981.17	PASS	AB=0.789;AC=25;AF=0.463;AN=54;BaseQRankSum=5.690;DP=429;FS=33.870;HRun=0;HaplotypeScore=148.2865;InbreedingCoeff=0.3017;MQ=29.27;MQ0=73;MQRankSum=-5.069;QD=5.25;ReadPosRankSum=1.792;VQSLOD=1.0727;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:22,1:22:4.23:74,4,0	0/0:4,0:5:5.85:0,6,53	0/0:38,0:2:3.01:0,3,34	0/0:86,0:1:0:0,0,0	0/0:13,5:20:1.23:0,1,3	0/0:20,0:20:33.08:0,33,615	0/0:20,0:21:30.10:0,30,617	0/0:14,0:8:5.99:0,6,69	0/0:7,0:6:12.02:0,12,220	1/1:7,5:12:24.08:370,24,0	0/1:6,5:10:0.05:0,0,0	1/1:5,3:4:4.72:17,5,0	0/0:6,0:6:3.19:0,3,91	1/1:7,3:5:5.90:64,6,0	1/1:5,3:8:8.06:107,8,0	1/1:10,0:11:0.28:7,0,0	0/1:4,0:8:9.22:9,0,29	1/1:3,3:6:10.89:125,11,0	0/1:6,0:3:5:5,0,44	0/1:7,2:14:28.77:38,0,29	0/1:15,1:15:3.95:31,0,4	0/0:11,0:11:18.02:0,18,420	0/1:8,2:9:0:0,0,0	./.	0/1:9,4:13:1.63:32,0,2	0/1:7,1:8:52.56:53,0,78	1/1:3,5:9:12.92:163,13,0	0/1:5,1:7:0.98:41,0,1
chr10	41579387	.	GAGACCC	G	837.46	PASS	AB=0.966;AC=21;AF=0.404;AN=52;BaseQRankSum=2.205;DP=424;FS=5.040;HRun=0;HaplotypeScore=149.8049;InbreedingCoeff=0.0504;MQ=34.39;MQ0=44;MQRankSum=-2.248;QD=4.90;ReadPosRankSum=0.216;VQSLOD=1.8754;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:21:36.98:44,0,37	0/0:6,0:6:5.81:0,6,53	./.	0/0:90,0:7:1.44:0,1,8	0/0:13,0:13:2.76:0,3,25	0/0:20,0:20:15.51:0,16,338	0/0:21,0:21:9.13:0,9,384	0/0:13,0:5:8.97:0,9,86	0/1:11,0:10:1.05:1,0,53	0/1:11,0:10:51.52:52,0,100	0/0:9,1:10:0.35:0,0,1	1/1:7,1:5:6.02:123,6,0	1/1:6,0:5:7.32:58,7,0	1/1:10,0:5:5.88:88,6,0	0/0:10,0:10:8.92:0,9,64	0/1:10,1:10:9.42:98,0,9	0/0:12,0:10:10.87:0,11,151	0/1:6,0:6:35.97:36,0,56	0/1:3,0:3:25.33:44,0,25	1/1:19,0:18:9.17:120,9,0	0/1:12,0:11:16.10:20,0,16	0/0:13,0:13:20.17:0,20,205	0/1:6,4:9:0:0,0,0	./.	0/1:15,0:15:99:159,0,140	0/1:11,0:8:22.86:62,0,23	0/1:8,0:8:9.87:19,0,10	1/1:5,0:5:11.80:68,12,0
chr10	41579389	.	GACCC	G	869.56	PASS	AB=0.924;AC=24;AF=0.462;AN=52;BaseQRankSum=0.677;DP=415;FS=6.405;HRun=0;HaplotypeScore=140.7327;InbreedingCoeff=-0.1511;MQ=33.86;MQ0=41;MQRankSum=-2.582;QD=4.16;ReadPosRankSum=0.237;VQSLOD=1.8217;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:23,2:20:35.79:38,0,36	0/0:5,0:5:5.21:0,5,47	./.	0/0:89,0:7:2.99:0,3,10	0/0:12,1:13:2.75:0,3,38	0/0:16,0:16:15.49:0,15,325	0/1:21,0:21:8.60:9,0,358	0/0:10,0:4:9:0,9,86	0/1:9,0:8:2.50:3,0,32	0/1:9,1:10:44.11:147,0,44	0/0:6,4:10:0.33:0,0,1	1/1:6,2:5:6.02:91,6,0	1/1:5,0:4:7.21:30,7,0	1/1:10,0:5:5.74:74,6,0	0/1:6,4:10:15.89:16,0,22	0/1:9,1:9:35.69:67,0,36	0/1:11,0:10:11.94:12,0,99	0/1:6,0:6:8.08:31,0,8	0/1:3,0:3:25.09:42,0,25	1/1:18,1:18:0.41:120,0,0	1/1:11,1:11:5.54:19,6,0	0/0:13,0:13:6.56:0,7,130	0/1:10,0:9:0:0,0,0	./.	0/1:9,6:15:99:172,0,153	0/1:9,2:8:42.95:62,0,43	0/1:8,0:8:16.22:23,0,16	0/1:5,0:5:0.43:57,0,0
chr10	41579390	.	ACC	A	502.18	PASS	AB=0.997;AC=24;AF=0.462;AN=52;BaseQRankSum=0.860;DP=419;FS=0.000;HRun=3;HaplotypeScore=139.6182;InbreedingCoeff=-0.0965;MQ=34.00;MQ0=40;MQRankSum=-3.477;QD=2.64;ReadPosRankSum=0.718;VQSLOD=-0.4657;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:25,1:21:28.47:28,0,106	0/1:6,0:6:11:48,0,11	./.	0/0:93,0:9:11.16:0,11,93	0/0:13,0:13:2.82:0,3,38	0/1:14,0:14:10.15:10,0,255	0/0:21,0:21:26.68:0,27,315	0/0:10,0:4:6.12:0,6,46	0/0:9,0:8:4.73:0,5,67	0/1:10,0:10:47.75:48,0,68	0/0:10,0:10:0.34:0,0,1	1/1:8,0:5:5.88:49,6,0	0/1:5,0:4:4.78:5,0,19	1/1:10,0:5:1.56:35,2,0	0/0:10,0:10:11.58:0,12,66	0/1:10,0:9:25.16:25,0,80	0/1:12,0:10:18.73:39,0,19	0/1:6,0:6:35.06:43,0,35	0/1:3,0:3:25.94:34,0,26	1/1:18,1:18:14.72:93,15,0	1/1:9,3:11:1.61:7,2,0	0/0:13,0:13:20.95:0,21,178	0/1:10,0:9:0:0,0,0	./.	0/1:15,0:15:94.05:103,0,94	0/1:11,0:8:23.18:39,0,23	1/1:8,0:8:0.31:13,0,0	1/1:5,0:5:0.52:28,1,0
chr10	41579393	.	CAGAG	C	1235.73	PASS	AB=0.926;AC=27;AF=0.540;AN=50;BaseQRankSum=-1.161;DP=425;FS=0.856;HRun=0;HaplotypeScore=142.4857;InbreedingCoeff=0.3763;MQ=34.06;MQ0=38;MQRankSum=1.044;QD=6.44;ReadPosRankSum=1.052;VQSLOD=2.3326;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:23:0.20:0,0,234	0/0:5,0:6:8.95:0,9,146	./.	0/0:96,0:10:8:0,8,93	0/1:8,0:13:0:0,0,0	1/1:6,9:15:18.02:246,18,0	1/1:8,12:20:14.88:234,15,0	./.	1/1:3,6:8:9.03:147,9,0	0/1:11,0:11:2.41:2,0,334	0/1:10,0:10:0.02:0,0,0	1/1:8,0:5:2.22:7,2,0	1/1:2,3:4:9.03:141,9,0	1/1:5,0:5:5.79:37,6,0	0/1:9,0:10:1.93:2,0,118	0/0:11,0:10:12.02:0,12,134	0/0:11,0:10:0.66:0,1,168	0/0:7,0:6:9.47:0,9,117	0/1:3,0:3:19.66:20,0,46	0/1:18,0:18:22.09:70,0,22	0/1:11,0:11:0.11:0,0,0	1/1:6,7:13:15.05:246,15,0	0/1:9,0:9:0:0,0,0	./.	0/0:14,0:15:19.73:0,20,313	0/1:10,0:8:5.10:68,0,5	1/1:7,0:8:7.55:56,8,0	1/1:5,0:5:12.01:109,12,0
chr10	41579398	.	AGAGAGAG	A	556.08	PASS	AB=0.848;AC=12;AF=0.231;AN=52;BaseQRankSum=3.896;DP=430;FS=14.555;HRun=0;HaplotypeScore=161.0662;InbreedingCoeff=0.2504;MQ=34.63;MQ0=39;MQRankSum=-4.254;QD=5.15;ReadPosRankSum=2.394;VQSLOD=1.5502;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:25:12.49:12,0,640	0/0:6,0:6:9.03:0,9,262	0/0:35,0:1:0:0,0,0	0/0:94,0:10:11.42:0,11,125	0/0:16,0:16:5.67:0,6,51	0/0:17,0:17:32.93:0,33,407	0/0:21,0:21:32.90:0,33,382	./.	0/0:9,0:8:17.99:0,18,183	0/1:11,0:12:23.19:23,0,798	0/1:9,0:9:0.10:0,0,0	0/0:8,0:5:5.10:0,5,28	0/0:7,0:6:11.87:0,12,87	0/0:10,0:5:2.46:0,2,47	0/0:9,0:10:19.11:0,19,366	0/0:11,0:9:17.97:0,18,325	0/0:14,0:12:23.89:0,24,536	0/0:7,0:6:13.29:0,13,343	0/1:3,1:3:42.84:43,0,88	0/1:7,12:18:82.68:161,0,83	0/0:13,0:12:7.04:0,7,36	0/0:13,0:13:20.94:0,21,187	1/1:9,0:9:2.16:5,2,0	./.	0/0:14,0:15:15.49:0,15,492	0/1:8,3:8:99:120,0,110	1/1:6,2:8:8.18:107,8,0	1/1:1,4:5:11.83:223,12,0
chr10	41579423	.	C	CAG	382.05	PASS	AB=0.833;AC=6;AF=0.111;AN=54;BaseQRankSum=0.467;DP=478;FS=5.310;HRun=0;HaplotypeScore=144.9505;InbreedingCoeff=0.4548;MQ=59.51;MQ0=34;MQRankSum=-0.973;QD=6.06;ReadPosRankSum=-2.088;VQSLOD=2.3999;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:22:18.62:0,19,248	0/0:7,0:7:10.25:0,10,87	0/0:54,0:20:36.23:0,36,299	0/0:98,0:22:12.57:0,13,83	1/1:5,11:16:18.05:276,18,0	0/0:14,0:15:29.92:0,30,338	0/0:19,0:19:30.08:0,30,363	0/0:15,0:11:27.08:0,27,326	0/0:9,0:9:11.87:0,12,123	0/0:13,0:12:24.03:0,24,275	0/0:12,0:10:14.70:0,15,164	0/0:4,0:4:5.97:0,6,73	0/0:8,0:7:21.05:0,21,236	0/1:5,4:7:27.31:88,0,27	0/0:19,0:16:39.11:0,39,457	0/0:7,0:6:9.03:0,9,107	1/1:7,0:12:15:132,15,0	./.	0/0:11,0:7:17.96:0,18,184	0/1:21,0:20:16.62:17,0,261	0/0:8,1:7:8.99:0,9,92	0/0:15,0:14:30.05:0,30,337	0/0:9,0:9:8.70:0,9,92	0/0:6,0:2:3.01:0,3,36	0/0:20,0:16:27.08:0,27,324	0/0:13,0:9:15.03:0,15,168	0/0:7,0:6:5.85:0,6,72	0/0:6,0:5:12.03:0,12,136
chr10	41579480	.	AGTG	A	81.26	PASS	AB=0.896;AC=6;AF=0.111;AN=54;BaseQRankSum=1.881;DP=379;FS=3.987;HRun=0;HaplotypeScore=82.1832;InbreedingCoeff=0.2266;MQ=53.07;MQ0=50;MQRankSum=-4.345;QD=1.98;ReadPosRankSum=-1.314;VQSLOD=1.4152;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:16:14.14:0,14,219	0/0:7,0:7:18.06:0,18,379	0/0:32,0:14:38.88:0,39,624	0/0:49,1:16:22.84:0,23,469	0/0:18,0:18:42.14:0,42,834	0/0:14,0:11:27.09:0,27,530	0/0:19,0:18:39:0,39,758	0/1:11,0:11:42.48:102,0,42	0/0:15,0:15:39.12:0,39,780	0/1:10,0:9:40.84:41,0,148	0/0:15,0:9:8.69:0,9,92	0/0:3,0:2:5.96:0,6,49	0/0:11,0:8:21.07:0,21,445	0/0:8,0:7:18.06:0,18,407	0/0:13,0:8:2.54:0,3,147	0/0:5,0:3:6:0,6,76	0/0:15,0:14:42.10:0,42,872	1/1:4,0:4:5.94:41,6,0	0/0:9,0:5:14.08:0,14,102	0/0:20,0:17:16.12:0,16,128	0/1:4,4:5:0:0,0,0	0/0:9,0:9:20.28:0,20,414	0/0:10,0:5:5.83:0,6,33	./.	0/0:13,0:7:5.70:0,6,32	0/0:9,0:4:8.91:0,9,99	0/1:7,0:4:1.07:1,0,13	0/0:6,0:4:8.72:0,9,92
chr10	41579481	.	GT	G	382.53	PASS	AB=0.884;AC=15;AF=0.278;AN=54;BaseQRankSum=3.411;DP=371;FS=0.000;HRun=1;HaplotypeScore=72.9362;InbreedingCoeff=0.3154;MQ=53.42;MQ0=46;MQRankSum=-5.727;QD=3.42;ReadPosRankSum=-1.153;VQSLOD=-0.5268;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:16:17.57:0,18,132	0/0:7,0:7:18.06:0,18,257	0/0:30,0:14:38.99:0,39,469	0/0:48,1:16:23.62:0,24,347	0/0:18,0:18:41.83:0,42,549	0/0:14,0:11:27.03:0,27,358	0/0:18,0:17:36.09:0,36,514	1/1:4,7:11:17.60:258,18,0	0/0:15,0:15:39.06:0,39,523	0/1:8,3:9:24.72:125,0,25	0/0:13,2:9:5.63:0,6,54	0/0:4,0:2:1.82:0,2,11	0/0:10,0:7:21.03:0,21,297	0/0:8,0:7:18.06:0,18,267	0/1:12,1:8:2.37:2,0,49	0/0:5,0:3:2.05:0,2,33	0/0:15,0:14:42.09:0,42,595	1/1:0,4:4:6.49:84,6,0	0/1:10,0:5:5.79:6,0,49	0/1:13,6:16:17.33:17,0,39	0/1:7,1:5:0:0,0,0	0/0:9,0:9:20.10:0,20,286	1/1:10,0:5:1.36:4,1,0	./.	0/1:10,3:7:0.83:1,0,19	0/0:7,1:3:2.74:0,3,41	1/1:7,0:4:4.17:20,4,0	0/1:5,0:4:0.47:0,0,51
chr10	41579486	.	GA	G	1034.98	PASS	AB=0.787;AC=27;AF=0.500;AN=54;BaseQRankSum=2.910;DP=447;FS=1.610;HRun=1;HaplotypeScore=86.5850;InbreedingCoeff=0.5147;MQ=49.53;MQ0=52;MQRankSum=-5.889;QD=4.37;ReadPosRankSum=-1.574;VQSLOD=-0.2507;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:14,14:18:17.63:28,0,18	0/0:7,0:7:18.05:0,18,211	0/0:28,0:14:35.59:0,36,342	0/0:47,0:16:27.82:0,28,252	0/0:22,0:21:33.09:0,33,370	0/0:14,0:11:18.01:0,18,188	0/0:19,0:18:29.77:0,30,331	1/1:42,3:36:25.41:269,25,0	0/0:17,0:15:27.08:0,27,328	1/1:8,4:10:19.63:183,20,0	1/1:5,12:10:3.44:39,3,0	1/1:1,3:2:3.01:38,3,0	0/0:9,0:7:15.04:0,15,192	0/0:11,0:8:18.06:0,18,239	1/1:7,8:10:5.49:103,5,0	0/1:4,2:4:14.01:32,0,14	0/0:15,0:14:39.11:0,39,459	1/1:6,0:6:8.21:45,8,0	0/1:13,2:9:58.54:59,0,106	1/1:19,5:18:15.24:180,15,0	0/1:9,1:7:0:0,0,0	0/0:13,0:12:19.17:0,19,217	0/1:10,6:12:14.92:68,0,15	./.	1/1:3,8:5:0.89:2,1,0	1/1:10,3:6:4.98:58,5,0	1/1:6,2:5:6.02:76,6,0	1/1:4,3:4:2.77:38,3,0
chr10	41579498	.	G	GGC	417.28	PASS	AB=0.957;AC=11;AF=0.220;AN=50;BaseQRankSum=5.973;DP=434;FS=0.870;HRun=0;HaplotypeScore=83.6013;InbreedingCoeff=-0.1018;MQ=43.81;MQ0=52;MQRankSum=-5.065;QD=2.31;ReadPosRankSum=-1.170;VQSLOD=1.7747;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:21:11.65:12,0,40	0/0:8,0:8:18.05:0,18,244	0/0:20,0:8:17.59:0,18,174	0/0:35,0:11:9.75:0,10,122	0/0:21,0:20:24.08:0,24,339	0/0:15,0:12:18.04:0,18,260	0/0:19,0:18:33.08:0,33,459	0/1:43,2:36:99:212,0,421	0/0:16,0:14:27.09:0,27,394	0/1:13,0:12:8.11:8,0,309	0/1:12,2:9:10.56:11,0,18	1/1:5,1:3:3.01:33,3,0	0/0:10,0:7:19.43:0,19,208	0/0:14,0:8:21:0,21,261	0/0:10,1:8:2.13:0,2,43	0/0:6,0:5:8.77:0,9,121	0/0:17,0:16:39.06:0,39,533	0/0:7,0:6:9.45:0,9,98	0/1:16,0:9:43.35:43,0,180	0/1:18,4:17:17.28:72,0,17	./.	0/0:13,0:12:9.92:0,10,140	0/1:14,0:12:26.35:55,0,26	./.	0/0:9,1:6:0:0,0,0	0/1:13,1:7:74.36:74,0,123	./.	0/1:6,0:3:24.09:31,0,24
chr10	41579540	.	GAA	G	2419.95	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=-2.973;DP=523;FS=0.927;HRun=3;HaplotypeScore=91.6750;InbreedingCoeff=0.7188;MQ=45.92;MQ0=41;MQRankSum=-1.375;QD=9.92;ReadPosRankSum=2.505;VQSLOD=0.5441;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:30:60.81:0,61,438	0/0:11,0:11:29.51:0,30,234	0/0:18,0:8:10.34:0,10,166	0/0:24,0:7:1.99:0,2,105	0/0:18,0:17:38.86:0,39,330	0/0:23,0:22:62.74:0,63,506	0/0:14,0:14:32.90:0,33,273	1/1:21,0:16:44.67:325,45,0	0/0:13,0:11:20.95:0,21,174	1/1:16,0:14:38.63:293,39,0	1/1:12,0:9:13.61:110,14,0	0/0:18,0:11:2.96:0,3,20	0/0:11,0:9:23.82:0,24,176	0/0:18,0:13:20.46:0,20,139	0/1:19,0:17:8.14:52,0,8	0/0:15,0:13:35.80:0,36,284	0/0:23,0:22:53.27:0,53,405	1/1:10,0:7:14.95:120,15,0	1/1:11,15:19:44.68:398,45,0	1/1:20,0:18:1.90:143,2,0	0/1:31,0:27:42.98:95,0,43	0/0:18,0:18:26.48:0,26,200	0/0:23,0:22:2.95:0,3,24	0/1:18,0:16:0:0,0,0	1/1:15,0:13:35.60:266,36,0	1/1:18,0:17:42.50:327,42,0	1/1:15,0:12:17.76:127,18,0	1/1:23,0:21:32.71:367,33,0
chr10	41579770	.	CA	C	1329.05	PASS	AC=4;AF=0.074;AN=54;BaseQRankSum=4.665;DP=687;FS=1.332;HRun=3;HaplotypeScore=54.5959;InbreedingCoeff=0.8829;MQ=37.21;MQ0=192;MQRankSum=2.774;QD=17.04;ReadPosRankSum=2.072;VQSLOD=3.3345;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,42:39:63.20:780,63,0	0/0:8,0:6:18.06:0,18,258	./.	0/0:22,0:1:3.01:0,3,41	0/0:19,0:14:27.05:0,27,365	0/0:21,0:21:48.15:0,48,673	0/0:28,0:17:48.10:0,48,646	0/0:30,0:21:57.15:0,57,797	0/0:19,0:19:45.15:0,45,647	0/0:20,0:12:36.12:0,36,518	0/0:25,0:8:18.06:0,18,259	0/0:22,0:20:48.12:0,48,667	0/0:19,0:19:45.15:0,45,648	0/0:24,0:24:51.17:0,51,733	0/0:32,0:31:63.18:0,63,885	1/1:2,23:25:54.15:669,54,0	0/0:27,0:20:48.16:0,48,691	0/0:27,0:20:45.13:0,45,623	0/0:35,0:22:63.21:0,63,902	0/0:26,0:15:39.09:0,39,538	0/0:36,0:16:42.14:0,42,604	0/0:16,0:13:36.03:0,36,471	0/0:26,0:16:30.04:0,30,407	0/0:25,0:21:36.12:0,36,517	0/0:17,0:14:27.09:0,27,388	0/0:34,0:28:78.26:0,78,1121	0/0:22,0:21:48.16:0,48,691	0/0:3,0:3:9.03:0,9,130
chr10	41579930	.	T	TG	13417.99	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-6.145;DP=663;FS=1.835;HRun=2;HaplotypeScore=65.6033;InbreedingCoeff=0.9831;MQ=51.64;MQ0=21;MQRankSum=-1.795;QD=30.78;ReadPosRankSum=0.475;VQSLOD=4.4243;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,1:41:99:752,110,0	0/0:17,0:17:51.12:0,51,602	0/0:12,0:5:11.76:0,12,111	0/0:18,0:7:7.94:0,8,112	0/0:28,0:28:77.90:0,78,856	0/0:31,0:31:90.22:0,90,1080	0/0:24,0:24:69.17:0,69,823	1/1:4,24:28:72.17:926,72,0	0/0:20,0:20:56.92:0,57,590	1/1:2,24:25:72.09:910,72,0	1/1:0,11:11:21:269,21,0	1/1:1,22:23:54.18:769,54,0	0/0:11,0:11:33.09:0,33,393	0/0:21,0:21:63.03:0,63,710	1/1:3,30:31:72.24:1020,72,0	1/1:1,2:20:44.57:311,45,0	0/0:24,0:24:57.16:0,57,685	1/1:0,18:18:48.16:686,48,0	1/1:3,25:23:63.19:866,63,0	1/1:1,37:38:87.07:1161,87,0	1/1:2,22:24:45.15:643,45,0	0/0:21,0:21:57.13:0,57,674	1/1:0,21:21:51.17:709,51,0	1/1:1,22:23:60.20:858,60,0	1/1:1,23:24:54.10:740,54,0	1/1:2,31:32:93.21:1270,93,0	1/1:1,32:33:93.16:1271,93,0	1/1:0,8:8:18.06:257,18,0
chr10	41581153	.	TG	T	4179.98	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=11.988;DP=734;FS=0.000;HRun=1;HaplotypeScore=147.6412;InbreedingCoeff=0.9886;MQ=58.81;MQ0=3;MQRankSum=-0.102;QD=19.72;ReadPosRankSum=0.228;VQSLOD=3.5673;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:90.25:0,90,1336	0/0:15,0:15:45.14:0,45,681	0/0:24,0:21:57.07:0,57,811	0/0:25,0:22:55.65:0,56,841	0/0:30,0:30:90.29:0,90,1379	0/0:29,0:29:81.22:0,81,1194	0/0:35,0:35:99:0,102,1543	1/1:21,0:20:47.13:249,47,0	0/0:31,0:31:93.28:0,93,1404	0/0:39,0:39:13.51:0,14,393	0/0:27,0:27:16.38:0,16,268	1/1:0,21:21:60.20:835,60,0	0/0:40,0:41:97.44:0,97,1739	0/0:32,0:32:93.23:0,93,1355	0/0:26,0:26:24.18:0,24,272	0/0:32,0:32:93.27:0,93,1387	0/0:22,0:22:66.17:0,66,958	0/0:18,0:18:13.81:0,14,168	1/1:19,0:19:36.45:177,36,0	1/1:35,0:35:84.89:447,85,0	1/1:16,0:16:14.78:152,15,0	0/0:37,0:37:99:0,108,1685	1/1:0,18:18:51.13:688,51,0	1/1:0,26:26:69.23:965,69,0	0/0:29,0:29:33.17:0,33,307	1/1:26,0:26:44.11:263,44,0	1/1:22,0:22:45:273,45,0	1/1:8,0:8:23.15:131,23,0
chr10	41581159	.	CT	C	5132.54	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=6.121;DP=761;FS=8.797;HRun=4;HaplotypeScore=153.3680;InbreedingCoeff=0.9996;MQ=63.79;MQ0=3;MQRankSum=1.158;QD=32.48;ReadPosRankSum=0.779;VQSLOD=2.7233;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:84.20:0,84,1183	0/0:14,0:14:42.14:0,42,603	0/0:28,0:25:45.18:0,45,734	0/0:27,0:24:52.91:0,53,742	0/0:32,0:32:96.32:0,96,1378	0/0:29,0:29:81.27:0,81,1145	0/0:33,0:33:93.27:0,93,1315	1/1:0,24:23:63.18:764,63,0	0/0:31,0:31:90.30:0,90,1288	0/0:39,0:39:99:0,116,846	0/0:25,0:25:71.76:0,72,588	0/0:23,0:23:59.09:0,59,409	0/0:42,0:42:99:0,126,1785	0/0:34,0:34:96.32:0,96,1363	0/0:29,0:29:83.76:0,84,686	0/0:33,0:33:90.29:0,90,1264	0/0:21,0:21:63.17:0,63,851	0/0:19,0:19:47.91:0,48,399	1/1:2,19:21:54.14:654,54,0	1/1:1,36:37:99:1242,102,0	1/1:1,14:15:38.99:444,39,0	0/0:40,0:40:99:0,117,1646	0/0:18,0:18:53.24:0,53,379	0/0:26,0:26:65.73:0,66,498	0/0:32,0:32:95.61:0,96,762	1/1:2,27:29:81.24:989,81,0	1/1:1,23:24:60.19:743,60,0	1/1:0,8:8:24.08:297,24,0
chr10	41581361	.	A	ATCTCTCTC	3944.71	PASS	AB=1.000;AC=20;AF=0.357;AN=56;BaseQRankSum=3.813;DP=618;FS=8.002;HRun=0;HaplotypeScore=223.8626;InbreedingCoeff=0.3600;MQ=51.10;MQ0=17;MQRankSum=4.394;QD=12.44;ReadPosRankSum=-1.091;VQSLOD=1.6238;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:13:24.06:0,24,609	0/0:9,0:9:21.07:0,21,558	0/0:24,0:9:22.56:0,23,409	0/0:17,0:3:1.82:0,2,5	0/0:16,0:16:39.13:0,39,977	0/0:27,0:27:51.17:0,51,1346	0/0:26,0:25:53.71:0,54,1399	1/1:28,0:26:44.13:258,44,0	0/0:21,0:21:60.20:0,60,1505	1/1:32,0:31:46.77:1018,47,0	1/1:15,0:15:27.08:427,27,0	1/1:12,16:27:18.04:569,18,0	0/0:23,0:23:63.21:0,63,1607	0/0:20,0:20:51.14:0,51,1207	0/1:23,0:22:56.06:309,0,56	0/0:24,0:24:60.03:0,60,1503	0/0:25,0:24:26.99:0,27,1024	1/1:12,0:11:11.44:341,11,0	0/1:19,0:16:29.51:54,0,30	0/1:27,0:26:60.72:61,0,73	0/1:21,0:21:13.44:75,0,13	0/0:36,0:35:69.24:0,69,1688	0/0:5,9:17:0.47:0,0,1	1/1:5,11:21:3.48:130,3,0	0/1:28,0:28:51.23:510,0,51	0/1:33,0:33:99:99,0,175	0/1:23,0:22:74.03:91,0,74	0/1:6,0:6:0.51:3,0,1
chr10	41581363	.	CTGTGTG	C	3132.89	PASS	AB=0.879;AC=37;AF=0.740;AN=50;BaseQRankSum=-1.053;DP=621;FS=5.239;HRun=0;HaplotypeScore=189.1047;InbreedingCoeff=0.6012;MQ=50.89;MQ0=17;MQRankSum=-2.047;QD=7.19;ReadPosRankSum=1.630;VQSLOD=2.3959;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:10,1:11:2.98:0,3,21	1/1:6,1:10:1.77:3,2,0	./.	./.	1/1:11,4:16:6.02:122,6,0	1/1:17,10:27:9.02:183,9,0	1/1:23,1:24:9.88:184,10,0	0/0:28,0:26:0.47:0,0,1	1/1:13,9:23:21.06:407,21,0	0/1:25,1:28:54.85:85,0,55	0/0:13,0:14:2.99:0,3,24	0/0:29,0:28:13.28:0,13,173	1/1:17,6:25:18.05:295,18,0	1/1:15,7:21:15.52:305,16,0	1/1:14,0:22:19.57:92,20,0	1/1:14,10:24:20.90:401,21,0	0/0:18,0:28:18.92:0,19,386	1/1:10,0:11:5.76:31,6,0	1/1:19,0:18:8.39:92,8,0	1/1:16,0:24:9.03:126,9,0	1/1:19,0:19:5.93:59,6,0	1/1:20,15:36:15.05:305,15,0	1/1:14,0:14:0.89:2,1,0	0/0:26,0:24:10.78:0,11,104	1/1:19,0:27:28.08:136,28,0	1/1:25,0:33:24.08:335,24,0	1/1:19,0:22:9.03:125,9,0	./.
chr10	41582204	.	AT	A	8349.48	PASS	AB=1.000;AC=31;AF=0.554;AN=56;BaseQRankSum=5.460;DP=554;FS=2.860;HRun=8;HaplotypeScore=66.3530;InbreedingCoeff=0.9417;MQ=63.77;MQ0=0;MQRankSum=-0.921;QD=24.78;ReadPosRankSum=-1.344;VQSLOD=5.2123;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:69.21:0,69,834	0/0:15,0:15:45.14:0,45,544	0/1:8,0:8:4.30:4,0,149	0/0:11,0:8:15.69:0,16,138	0/0:19,0:19:54.17:0,54,651	0/0:35,0:35:99:0,102,1232	0/0:16,0:16:39.08:0,39,455	1/1:3,28:31:78.10:742,78,0	0/0:15,0:15:42.13:0,42,507	1/1:0,24:24:72.12:695,72,0	1/1:3,23:26:66.10:637,66,0	1/1:2,16:18:45.07:435,45,0	0/0:20,0:20:48.15:0,48,578	0/0:8,0:8:17.68:0,18,248	1/1:1,13:14:42.07:404,42,0	0/0:16,0:16:39.12:0,39,471	0/0:2,0:28:69.11:0,69,358	1/1:3,16:19:40.87:428,41,0	1/1:5,17:20:48.06:459,48,0	1/1:2,29:31:90.14:867,90,0	1/1:0,5:5:15.02:145,15,0	0/0:8,0:8:24.07:0,24,290	1/1:2,12:14:36.06:348,36,0	1/1:1,19:20:54.09:522,54,0	1/1:3,34:37:93.15:898,93,0	1/1:3,21:24:69.11:666,69,0	1/1:3,27:30:84.13:811,84,0	1/1:4,10:14:30.05:289,30,0
chr10	41582266	.	TC	T	5384.54	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=9.389;DP=656;FS=25.444;HRun=6;HaplotypeScore=102.0455;InbreedingCoeff=0.9992;MQ=71.36;MQ0=0;MQRankSum=-3.236;QD=26.52;ReadPosRankSum=1.717;VQSLOD=3.1613;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,29:33:78.20:838,78,0	0/0:14,0:14:36.12:0,36,474	0/0:28,0:28:72.22:0,72,921	0/0:20,0:20:32.57:0,33,560	0/0:26,0:26:75.24:0,75,975	0/0:24,0:24:63.20:0,63,828	0/0:24,0:24:62.97:0,63,780	1/1:3,16:19:45.11:484,45,0	0/0:22,0:22:63.20:0,63,816	0/0:22,0:22:66.21:0,66,865	0/0:31,0:31:81.26:0,81,1066	0/0:22,0:22:63.19:0,63,813	0/0:26,0:26:75.23:0,75,972	0/0:17,0:17:48.16:0,48,632	0/0:32,0:32:96.27:0,96,1219	1/1:2,11:13:30.07:316,30,0	0/0:24,0:24:63.19:0,63,814	0/0:27,0:27:75.08:0,75,944	1/1:2,20:22:60.15:643,60,0	1/1:4,32:36:81.15:850,81,0	1/1:0,17:17:39.10:419,39,0	0/0:16,0:16:45.15:0,45,591	0/0:21,0:21:60.20:0,60,789	0/0:28,0:28:81.23:0,81,1035	0/0:29,0:29:78.25:0,78,1025	1/1:0,27:27:78.20:837,78,0	1/1:1,28:29:72.13:773,72,0	1/1:0,7:7:21.05:225,21,0
chr10	41582892	.	T	TTA	3060.17	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-9.709;DP=596;FS=0.000;HRun=0;HaplotypeScore=90.1018;InbreedingCoeff=0.9884;MQ=71.05;MQ0=0;MQRankSum=-1.103;QD=50.17;ReadPosRankSum=1.345;VQSLOD=4.6472;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,37:39:99:2058,111,0	0/0:7,0:7:21.07:0,21,309	0/0:26,0:24:69.21:0,69,991	0/0:15,0:12:24.08:0,24,342	0/0:17,0:17:51.17:0,51,750	0/0:16,0:16:42.13:0,42,600	0/0:18,0:18:51.17:0,51,751	0/0:28,0:28:75.25:0,75,1097	0/0:14,0:14:42.14:0,42,616	0/0:17,0:17:48.14:0,48,656	0/0:7,0:7:15.05:0,15,221	0/0:18,0:18:54.18:0,54,795	0/0:26,0:26:75.25:0,75,1104	0/0:22,0:22:63.20:0,63,908	0/0:26,0:26:69.22:0,69,997	1/1:0,22:22:60.21:1124,60,0	0/0:38,0:38:99:0,114,1676	0/0:21,0:21:60.20:0,60,884	0/0:24,0:24:69.23:0,69,1010	0/0:18,0:18:39.13:0,39,574	0/0:51,0:51:99:0,147,2138	0/0:17,0:17:48.13:0,48,667	0/0:13,0:13:33.08:0,33,445	0/0:38,0:38:99:0,114,1676	0/0:15,0:15:42.10:0,42,587	0/0:18,0:18:51.17:0,51,751	0/0:14,0:14:36.12:0,36,530	0/0:11,0:11:33.11:0,33,486
chr10	41583297	.	ACCCAATCTGCCT	A	19167.75	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=15.906;DP=456;FS=30.338;HRun=0;HaplotypeScore=226.8980;InbreedingCoeff=0.9652;MQ=83.53;MQ0=0;MQRankSum=-14.865;QD=99.83;ReadPosRankSum=0.590;VQSLOD=2.9231;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,105,5908	0/0:8,0:8:24.08:0,24,1499	0/0:19,0:19:57.20:0,57,2977	0/0:15,0:15:42.14:0,42,2351	0/0:16,0:16:45.15:0,45,2848	0/0:27,0:27:78.73:0,79,4449	0/0:22,0:22:66.23:0,66,4101	1/1:0,17:17:51.15:1514,51,0	0/0:23,0:23:69.24:0,69,4310	1/1:0,13:13:39.13:1544,39,0	1/1:0,13:13:36.12:1423,36,0	1/1:0,13:13:21.07:831,21,0	0/0:19,0:19:57.20:0,57,3311	0/0:14,0:14:42.14:0,42,2528	1/1:0,15:15:42.14:1575,42,0	0/0:22,0:22:66.23:0,66,4066	0/0:25,0:25:66.20:0,66,3522	1/1:2,1:3:5.97:45,6,0	1/1:0,7:7:21.06:737,21,0	1/1:4,16:20:57.18:2049,57,0	1/1:0,4:4:6.02:237,6,0	0/0:19,0:19:57.18:0,57,3417	1/1:0,12:12:33.11:1304,33,0	1/1:0,8:8:12.04:430,12,0	1/1:2,15:17:51.15:1832,51,0	1/1:0,20:20:60.21:2374,60,0	1/1:0,22:22:60.21:2324,60,0	1/1:0,8:8:24.08:950,24,0
chr10	41583327	.	GAAAATATGTTTT	G	13963.60	PASS	AC=28;AF=0.519;AN=54;BaseQRankSum=14.071;DP=470;FS=13.378;HRun=0;HaplotypeScore=265.6159;InbreedingCoeff=0.9620;MQ=72.79;MQ0=0;MQRankSum=-14.219;QD=74.27;ReadPosRankSum=4.519;VQSLOD=3.3268;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:63.17:0,63,2909	0/0:7,0:7:21.07:0,21,1053	0/0:23,0:22:29.52:0,30,2553	0/0:24,0:19:51.14:0,51,2318	0/0:17,0:17:36.85:0,37,1990	0/0:26,0:26:67.11:0,67,3445	0/0:28,0:28:84.29:0,84,4784	1/1:5,9:14:27.09:1007,27,0	0/0:22,0:22:48.16:0,48,2602	1/1:5,9:14:27.09:1007,27,0	1/1:4,11:15:27.05:914,27,0	1/1:5,6:11:15.05:559,15,0	0/0:17,0:17:48.15:0,48,2643	0/0:18,0:18:51.18:0,51,2811	1/1:5,10:15:27.09:1007,27,0	0/0:21,0:21:57.19:0,57,3199	0/0:27,0:27:45.15:0,45,2744	1/1:0,2:2:3.01:112,3,0	1/1:5,6:11:18.06:671,18,0	1/1:5,14:19:39.13:1418,39,0	./.	0/0:23,0:23:54.18:0,54,2695	1/1:5,7:12:30.10:1118,30,0	1/1:3,5:8:9.03:335,9,0	1/1:1,14:15:39.13:1454,39,0	1/1:5,14:19:42.14:1566,42,0	1/1:7,16:24:51.18:1900,51,0	1/1:1,8:9:24.08:894,24,0
chr10	41583336	.	T	TCTCTC	393.54	PASS	AB=1.000;AC=11;AF=0.204;AN=54;BaseQRankSum=6.125;DP=410;FS=1.982;HRun=0;HaplotypeScore=224.9014;InbreedingCoeff=0.5473;MQ=69.70;MQ0=5;MQRankSum=-8.079;QD=5.32;ReadPosRankSum=0.416;VQSLOD=2.1013;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:48.15:0,48,1052	0/0:6,0:6:18.06:0,18,419	0/0:26,0:20:47.12:0,47,1170	0/0:28,0:19:44.24:0,44,960	0/0:16,0:16:36.10:0,36,751	0/0:21,0:21:39.25:0,39,1241	0/0:29,0:29:84.26:0,84,1790	0/0:9,0:9:25.32:0,25,282	0/0:20,0:20:51.16:0,51,1143	0/0:9,0:9:26.37:0,26,252	0/1:11,0:11:0.10:0,0,4	1/1:7,2:9:6.70:18,7,0	0/0:16,0:16:48.16:0,48,1111	0/0:19,0:19:54.04:0,54,1195	0/0:10,0:10:5.10:0,5,14	0/0:19,0:19:57.20:0,57,1321	0/0:32,0:32:51.14:0,51,1130	0/0:2,0:2:3.01:0,3,35	0/0:6,0:6:18.04:0,18,198	1/1:14,0:14:2.70:229,3,0	./.	0/0:20,0:20:57.01:0,57,1209	1/1:7,3:10:6.99:121,7,0	1/1:5,0:5:8.35:54,8,0	0/0:14,0:14:17.32:0,17,51	0/0:14,0:14:18.78:0,19,349	0/1:17,0:17:92.31:92,0,249	0/1:8,0:8:19.41:19,0,185
chr10	41583339	.	TAAAAAG	T	1459.82	PASS	AB=1.000;AC=22;AF=0.407;AN=54;BaseQRankSum=15.226;DP=423;FS=21.336;HRun=0;HaplotypeScore=221.8350;InbreedingCoeff=0.6553;MQ=66.89;MQ0=8;MQRankSum=-12.488;QD=9.48;ReadPosRankSum=6.347;VQSLOD=1.0736;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:42.14:0,42,1430	0/0:6,0:6:18.06:0,18,674	0/0:28,0:20:56.75:0,57,1870	0/0:28,0:19:49.56:0,50,1528	0/0:15,0:15:35.64:0,36,1033	0/0:19,0:18:51.18:0,51,1869	0/0:25,0:25:69.24:0,69,2491	0/1:15,0:15:42.36:42,0,352	0/0:19,0:19:48.16:0,48,1564	0/1:11,0:11:59.57:86,0,60	0/1:13,0:13:18.56:114,0,19	1/1:8,2:9:14.67:116,15,0	0/0:16,0:16:48.16:0,48,1628	0/0:19,0:19:57.16:0,57,1760	1/1:10,0:10:25.69:132,26,0	0/0:22,0:21:63.20:0,63,2042	0/0:32,0:32:51.18:0,51,1873	0/0:3,0:3:1.30:0,1,22	0/1:13,0:13:10.23:10,0,598	1/1:14,0:14:34.51:198,35,0	./.	0/0:18,0:18:51.17:0,51,1701	1/1:7,3:10:29.43:220,29,0	1/1:5,0:5:8.58:46,9,0	1/1:14,0:14:36.81:180,37,0	1/1:14,0:14:34.89:146,35,0	1/1:17,0:17:47.69:289,48,0	1/1:8,0:8:20.98:85,21,0
chr10	41583345	.	G	GCT	1492.79	PASS	AB=0.895;AC=37;AF=0.841;AN=44;BaseQRankSum=2.059;DP=520;FS=1.280;HRun=0;HaplotypeScore=255.7149;InbreedingCoeff=0.1122;MQ=57.32;MQ0=10;MQRankSum=-1.588;QD=3.41;ReadPosRankSum=0.493;VQSLOD=2.4435;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:10,0:10:9:0,9,90	./.	0/1:24,0:15:0:0,0,0	1/1:18,0:18:2.79:25,3,0	0/1:24,0:23:16.78:74,0,17	1/1:26,0:26:15:142,15,0	1/1:29,0:29:23.65:141,24,0	1/1:17,0:22:11.71:104,12,0	1/1:15,0:15:8.92:71,9,0	1/1:23,0:22:9.11:50,9,0	1/1:11,0:10:8.56:46,9,0	0/1:13,3:17:9.02:226,0,9	1/1:21,0:21:12.01:129,12,0	1/1:15,0:15:1.60:25,2,0	1/1:25,0:24:17.61:138,18,0	1/1:32,0:32:8:47,8,0	./.	1/1:17,0:16:4.40:18,4,0	1/1:19,0:19:5.69:30,6,0	./.	0/1:11,10:21:19.62:133,0,20	1/1:10,0:10:8.79:52,9,0	./.	0/1:23,0:22:3.20:29,0,3	1/1:17,0:17:8.85:55,9,0	1/1:27,0:27:13.46:74,13,0	./.
chr10	41583384	.	C	CTGTGTGTG	2362.40	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=0.798;DP=512;FS=1.239;HRun=0;HaplotypeScore=226.8105;InbreedingCoeff=-0.0506;MQ=53.87;MQ0=14;MQRankSum=-4.048;QD=9.84;ReadPosRankSum=0.527;VQSLOD=2.3658;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:13:2.07:0,2,21	0/0:6,0:6:18.06:0,18,453	0/0:38,0:21:36.79:0,37,917	0/0:35,0:19:28.32:0,28,698	0/0:22,0:20:39.06:0,39,972	0/0:25,0:25:54.17:0,54,1240	0/0:21,0:21:40.85:0,41,793	0/1:25,0:22:63.77:64,0,95	0/0:24,0:22:19.63:0,20,579	0/1:21,0:21:49.67:792,0,50	0/1:24,0:23:24.37:236,0,24	0/0:8,0:8:16.53:0,17,95	0/0:17,0:17:6.05:0,6,779	0/1:19,0:19:30.39:30,0,312	0/1:20,0:20:9.51:261,0,10	0/0:20,0:20:17.37:0,17,128	1/1:6,18:29:20.29:557,20,0	1/1:5,0:5:1.83:82,2,0	0/1:11,0:10:27.41:90,0,27	0/1:20,0:20:42.18:42,0,97	1/1:4,0:3:3.01:76,3,0	0/0:29,0:28:57.11:0,57,1346	0/1:10,0:10:24.89:25,0,78	0/0:5,0:5:1.66:0,2,14	0/1:21,0:20:8.44:57,0,8	0/1:11,0:10:97.44:97,0,115	0/1:20,0:20:33.45:116,0,33	0/0:7,0:5:5.91:0,6,38
chr10	41583386	.	C	CTGTGTGTGTG	5230.06	PASS	AB=0.992;AC=31;AF=0.554;AN=56;BaseQRankSum=1.739;DP=565;FS=11.598;HRun=0;HaplotypeScore=261.1282;InbreedingCoeff=0.4897;MQ=54.17;MQ0=14;MQRankSum=-8.232;QD=15.95;ReadPosRankSum=-1.931;VQSLOD=2.2058;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:16:0.34:0,0,1	0/0:6,0:6:15.04:0,15,396	0/0:38,0:23:5.49:0,5,986	0/0:37,0:20:20.86:0,21,879	0/0:23,0:21:15.90:0,16,999	0/0:25,0:25:36.09:0,36,909	0/0:21,0:21:1.77:0,2,706	1/1:32,0:29:41.63:906,42,0	0/0:24,0:22:25.99:0,26,641	1/1:7,14:23:6.25:1207,6,0	0/1:22,1:22:7.24:328,0,7	0/1:9,0:9:11.66:131,0,12	0/0:16,0:17:25.34:0,25,737	0/1:20,0:20:58.31:58,0,322	1/1:8,11:22:8.51:345,9,0	1/1:12,0:21:3:26,3,0	1/1:25,2:27:24.06:628,24,0	1/1:5,0:5:4.26:106,4,0	1/1:14,0:11:20.85:215,21,0	1/1:16,0:28:2.90:90,3,0	1/1:7,0:6:5.76:115,6,0	0/0:29,0:28:46.97:0,47,1249	1/1:16,0:16:12.02:256,12,0	0/1:8,0:8:0.14:0,0,0	1/1:8,12:24:6.47:92,6,0	0/1:13,0:12:7.92:240,0,8	1/1:23,0:26:22.40:395,22,0	1/1:9,0:7:3.01:93,3,0
chr10	41583587	.	ACTACT	A	19171.84	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=13.460;DP=617;FS=0.359;HRun=0;HaplotypeScore=135.4527;InbreedingCoeff=0.9952;MQ=78.54;MQ0=0;MQRankSum=-8.361;QD=42.51;ReadPosRankSum=4.205;VQSLOD=4.6274;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,34:39:78.22:1572,78,0	0/0:8,0:8:24.08:0,24,737	0/0:16,0:16:42.14:0,42,1210	0/0:19,0:19:54.18:0,54,1425	1/1:1,27:28:32.95:684,33,0	0/0:25,0:25:69.24:0,69,2096	0/0:27,0:27:81.28:0,81,2487	1/1:5,21:26:60.21:1227,60,0	0/0:22,0:21:45.14:0,45,1306	1/1:2,11:13:33.07:595,33,0	1/1:1,30:31:60.04:1242,60,0	1/1:1,12:13:39.11:768,39,0	0/0:28,0:28:81.28:0,81,2483	1/1:5,21:26:45.15:931,45,0	1/1:0,25:25:60.21:1243,60,0	1/1:0,20:20:51.18:1056,51,0	1/1:1,29:30:54.15:1118,54,0	1/1:0,6:6:15.05:311,15,0	1/1:6,15:21:45.15:932,45,0	1/1:1,31:32:72.25:1491,72,0	1/1:3,22:25:33.11:683,33,0	0/0:20,0:20:57.20:0,57,1750	1/1:0,19:19:39.03:807,39,0	1/1:2,25:27:53.99:1118,54,0	1/1:3,14:17:24.08:497,24,0	1/1:0,28:28:81.25:1592,81,0	1/1:2,16:17:45.15:932,45,0	1/1:1,6:7:18.06:373,18,0
chr10	41586022	.	A	AT	5812.61	PASS	AB=1.000;AC=30;AF=0.536;AN=56;BaseQRankSum=-2.781;DP=564;FS=17.187;HRun=5;HaplotypeScore=80.7216;InbreedingCoeff=0.4617;MQ=67.85;MQ0=0;MQRankSum=0.183;QD=14.46;ReadPosRankSum=0.901;VQSLOD=3.1898;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:41,0:41:19.50:217,20,0	0/0:4,0:4:12.03:0,12,129	0/0:11,0:11:20.56:0,21,209	0/0:14,0:13:11.14:0,11,143	1/1:15,0:15:13.09:104,13,0	0/0:27,0:27:72.08:0,72,750	0/0:19,0:19:51.02:0,51,509	1/1:5,27:32:81.15:984,81,0	0/0:17,0:17:39.03:0,39,401	0/1:20,0:20:16.90:38,0,17	0/1:20,0:20:0.24:0,0,21	1/1:16,0:16:11.86:101,12,0	0/0:27,0:27:75.04:0,75,744	0/1:12,0:12:24.09:50,0,24	0/1:23,0:23:11.73:94,0,12	1/1:15,0:15:33.08:125,33,0	0/0:26,0:26:63.13:0,63,667	0/1:19,0:19:25.54:26,0,36	1/1:2,23:25:66.13:791,66,0	1/1:3,20:23:54.06:655,54,0	1/1:1,15:16:33.11:434,33,0	0/0:17,0:17:48.11:0,48,503	0/1:25,0:25:11.32:110,0,11	0/1:13,0:12:18.20:52,0,18	0/1:23,0:23:7.48:59,0,7	1/1:2,25:27:75.15:947,75,0	1/1:4,29:33:66.21:868,66,0	1/1:0,4:4:12.04:158,12,0
chr10	41586026	.	T	TA	2490.21	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=5.003;DP=549;FS=7.462;HRun=0;HaplotypeScore=89.6570;InbreedingCoeff=0.6912;MQ=67.80;MQ0=0;MQRankSum=-2.140;QD=11.86;ReadPosRankSum=3.897;VQSLOD=4.2058;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,36:40:92.83:1002,93,0	0/0:4,0:4:12.04:0,12,168	0/0:12,0:12:3.49:0,3,277	0/0:13,0:12:11.37:0,11,200	0/0:14,0:14:36.72:0,37,222	0/0:27,0:27:78.23:0,78,1046	0/0:19,0:19:51.17:0,51,703	0/1:30,0:30:10.69:196,0,11	0/0:15,0:15:45.13:0,45,593	0/0:20,0:20:55.65:0,56,534	0/0:21,0:21:62.47:0,62,588	0/0:15,0:15:42.63:0,43,276	0/0:26,0:26:75.25:0,75,1038	0/0:13,0:13:32.25:0,32,235	0/0:22,0:22:50.21:0,50,458	1/1:1,15:16:42.11:463,42,0	0/0:24,0:24:66.21:0,66,905	0/0:21,0:20:53.28:0,53,488	1/1:23,0:23:27.28:230,27,0	0/1:24,0:24:75.07:129,0,75	0/1:17,0:17:15.39:101,0,15	0/0:17,0:17:51.16:0,51,697	0/0:24,0:24:64.19:0,64,438	0/0:11,0:10:32.23:0,32,233	0/0:21,0:21:54.98:0,55,527	1/1:25,0:25:58.64:277,59,0	1/1:31,0:31:13.12:229,13,0	1/1:4,0:4:11.11:53,11,0
chr10	41586027	.	T	TA	5203.75	PASS	AB=0.958;AC=27;AF=0.482;AN=56;BaseQRankSum=0.581;DP=548;FS=4.576;HRun=8;HaplotypeScore=81.0830;InbreedingCoeff=0.8933;MQ=67.71;MQ0=1;MQRankSum=-1.796;QD=18.26;ReadPosRankSum=2.714;VQSLOD=4.8754;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:40,0:40:99:1096,99,0	0/0:4,0:4:12.01:0,12,110	0/0:13,0:12:27.08:0,27,201	0/0:15,0:13:7.34:0,7,120	1/1:2,13:15:39.12:451,39,0	0/0:27,0:27:62.03:0,62,630	0/0:19,0:19:42:0,42,378	1/1:30,0:30:9.70:233,10,0	0/0:14,0:14:38.99:0,39,350	0/0:20,0:20:54.02:0,54,493	0/0:20,0:20:56.70:0,57,501	1/1:1,14:15:42.12:486,42,0	0/0:26,0:26:54.01:0,54,494	1/1:2,11:13:27.08:313,27,0	0/0:21,0:21:47.62:0,48,406	1/1:16,0:16:45.12:509,45,0	0/0:25,0:25:65.95:0,66,584	0/0:21,0:20:53.37:0,53,439	1/1:22,0:22:29.33:219,29,0	0/1:22,0:23:43.78:169,0,44	1/1:16,0:16:9.61:126,10,0	0/0:17,0:17:44.99:0,45,403	1/1:3,21:24:57.17:660,57,0	1/1:2,9:10:27.08:313,27,0	0/0:21,0:21:54:0,54,486	1/1:25,0:25:63.54:308,64,0	1/1:31,0:31:21.20:259,21,0	1/1:4,0:4:11.45:63,11,0
chr10	41586169	.	G	GAGAGAGAGAGAA	2356.85	PASS	AB=0.982;AC=20;AF=0.357;AN=56;BaseQRankSum=1.569;DP=576;FS=9.068;HRun=0;HaplotypeScore=187.7973;InbreedingCoeff=-0.1632;MQ=61.18;MQ0=16;MQRankSum=-1.265;QD=7.55;ReadPosRankSum=2.005;VQSLOD=1.9805;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:22:35.53:72,0,36	0/1:7,0:7:18.95:19,0,41	0/0:59,0:22:4.95:0,5,139	0/0:64,0:19:4.63:0,5,100	0/1:16,0:16:61.91:62,0,101	0/1:20,0:20:68.06:236,0,68	0/1:15,0:14:77.64:84,0,78	0/1:34,0:33:16.66:17,0,346	0/0:11,0:11:11.53:0,12,71	0/1:24,0:24:11.18:459,0,11	1/1:17,0:16:14.81:98,15,0	0/0:14,0:13:11.35:0,11,71	0/1:18,0:18:25.61:26,0,111	0/1:12,0:12:20.32:20,0,121	0/1:14,6:21:33.60:424,0,34	0/1:13,0:12:8.18:8,0,34	0/1:18,0:18:99:159,0,150	1/1:16,0:15:17.73:462,18,0	0/0:14,0:13:8.98:0,9,190	0/0:20,0:19:16.08:0,16,120	0/0:19,0:18:27.35:0,27,210	0/0:16,0:16:8.04:0,8,71	0/0:18,0:18:8.98:0,9,73	0/0:21,0:21:20.96:0,21,179	1/1:18,0:18:3.59:302,4,0	0/1:18,0:18:44.68:45,0,307	0/1:22,0:22:33.38:33,0,210	0/0:8,0:8:19.61:0,20,132
chr10	41586171	.	G	GAGAGAGAGAA	1387.23	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=1.984;DP=574;FS=3.319;HRun=0;HaplotypeScore=155.8758;InbreedingCoeff=-0.2162;MQ=59.07;MQ0=17;MQRankSum=0.142;QD=4.64;ReadPosRankSum=3.639;VQSLOD=2.6815;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:21:35.41:59,0,35	0/1:7,0:7:30.16:30,0,42	0/1:55,0:19:19.69:20,0,134	0/0:65,0:18:10.39:0,10,95	0/1:16,0:16:61.92:62,0,99	0/1:21,0:21:96.12:231,0,96	0/1:15,0:14:77.94:86,0,78	0/0:34,0:33:50.93:0,51,432	0/0:12,0:12:8.09:0,8,59	0/1:24,0:24:99:137,0,114	1/1:8,9:18:1.04:62,1,0	0/0:14,0:13:4.47:0,4,44	0/1:21,0:21:28.18:28,0,104	0/1:11,0:11:20.32:20,0,121	0/1:20,0:20:58.17:128,0,58	0/1:13,0:12:8.18:8,0,34	0/0:18,0:18:7.10:0,7,200	0/1:16,0:15:12.03:325,0,12	0/0:13,0:12:29.16:0,29,231	0/0:18,0:17:16.79:0,17,121	0/0:19,0:18:27.34:0,27,208	0/0:17,0:17:8.25:0,8,72	0/0:18,0:18:8.98:0,9,73	0/0:21,0:21:17.96:0,18,145	1/1:17,0:17:4.23:307,4,0	0/0:18,0:18:13.36:0,13,338	0/1:22,0:22:38.70:39,0,201	0/0:8,0:8:20.17:0,20,135
chr10	41587209	.	G	GT	1386.25	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-3.846;DP=681;FS=0.000;HRun=7;HaplotypeScore=72.6819;InbreedingCoeff=0.9499;MQ=71.80;MQ0=0;MQRankSum=0.542;QD=26.16;ReadPosRankSum=1.347;VQSLOD=4.2683;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,23:28:69.08:812,69,0	0/0:15,0:15:35.63:0,36,347	0/0:21,0:19:12.11:0,12,186	0/0:12,0:12:8.05:0,8,97	0/0:33,0:33:78.12:0,78,751	0/0:36,0:36:96.12:0,96,914	0/0:27,0:27:69.10:0,69,666	0/0:31,0:31:72.05:0,72,680	0/0:26,0:26:72:0,72,667	0/0:30,0:30:75.10:0,75,721	0/0:22,0:22:59.92:0,60,549	0/0:28,0:28:72.09:0,72,689	0/0:25,0:25:69.10:0,69,662	0/0:22,0:22:66.11:0,66,637	0/0:19,0:19:54.09:0,54,521	1/1:4,21:25:34.22:696,34,0	0/0:21,0:21:54.08:0,54,521	0/0:12,0:12:33.05:0,33,318	0/0:23,0:23:63.07:0,63,597	0/0:31,0:31:84.11:0,84,802	0/0:23,0:23:63.08:0,63,602	0/0:38,0:38:99:0,102,978	0/0:21,0:21:63.10:0,63,608	0/0:19,0:19:51.08:0,51,493	0/0:21,0:21:54.06:0,54,515	0/0:27,0:27:72.11:0,72,695	0/0:27,0:27:81.10:0,81,771	0/0:18,0:18:45.06:0,45,434
chr10	41587692	.	G	GT	5095.22	PASS	AB=0.900;AC=11;AF=0.196;AN=56;BaseQRankSum=-6.926;DP=736;FS=1.646;HRun=1;HaplotypeScore=109.5737;InbreedingCoeff=0.8867;MQ=86.91;MQ0=0;MQRankSum=0.736;QD=33.74;ReadPosRankSum=1.177;VQSLOD=4.6386;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:47:99:0,141,1767	0/0:11,0:11:33.08:0,33,401	0/0:36,0:36:99:0,105,1343	0/0:23,0:23:68.96:0,69,868	0/0:23,0:23:66.21:0,66,857	0/0:23,0:23:69.22:0,69,890	0/0:22,0:22:66.21:0,66,856	0/0:32,0:32:87.24:0,87,1106	0/0:34,0:34:96.31:0,96,1244	1/1:0,30:30:87.26:1268,87,0	1/1:1,23:24:66.22:989,66,0	0/0:32,0:32:90.14:0,90,1117	0/0:20,0:20:60.18:0,60,759	0/0:21,0:21:60.18:0,60,758	1/1:0,20:20:60.20:898,60,0	0/0:33,0:33:99:0,99,1283	0/0:21,0:21:60.20:0,60,778	1/1:0,19:19:45.15:674,45,0	0/0:17,0:16:42.14:0,42,544	0/0:22,0:22:63.20:0,63,815	0/0:51,0:51:99:0,141,1820	0/0:23,0:23:69.21:0,69,881	0/0:30,0:30:84.07:0,84,1090	0/0:22,0:22:60.19:0,60,777	1/1:2,29:31:81.27:1212,81,0	0/1:24,3:27:53.46:53,0,838	0/0:31,0:31:90.29:0,90,1159	0/0:10,0:10:30.10:0,30,389
chr10	41588048	.	A	AT	1930.24	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-10.209;DP=686;FS=2.525;HRun=4;HaplotypeScore=67.9590;InbreedingCoeff=0.9988;MQ=87.42;MQ0=1;MQRankSum=-3.838;QD=35.75;ReadPosRankSum=2.710;VQSLOD=4.2943;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,39:39:99:1477,108,0	0/0:10,0:10:27.08:0,27,306	0/0:29,0:29:68.22:0,68,744	0/0:23,0:23:37.06:0,37,498	0/0:21,0:21:60.14:0,60,667	0/0:21,0:21:63.15:0,63,702	0/0:27,0:27:75.20:0,75,842	0/0:30,0:30:81.13:0,81,885	0/0:23,0:23:63.18:0,63,715	0/0:24,0:24:69.19:0,69,777	0/0:11,0:11:27.08:0,27,306	0/0:34,0:34:99:0,102,1146	0/0:21,0:21:60.15:0,60,669	0/0:26,0:26:78.22:0,78,885	0/0:39,0:39:99:0,108,1225	1/1:0,15:15:42.14:575,42,0	0/0:33,0:33:93.25:0,93,1044	0/0:25,0:25:72.18:0,72,804	0/0:15,0:15:45.05:0,45,484	0/0:19,0:19:54.10:0,54,589	0/0:59,0:58:99:0,156,1740	0/0:22,0:22:57.08:0,57,629	0/0:19,0:19:51.13:0,51,567	0/0:20,0:20:54.15:0,54,612	0/0:29,0:29:72.17:0,72,802	0/0:24,0:24:60.17:0,60,681	0/0:14,0:14:39.11:0,39,442	0/0:14,0:14:42.12:0,42,476
chr10	41588455	.	AACAC	A	7597.21	PASS	AB=0.666;AC=30;AF=0.536;AN=56;BaseQRankSum=-5.396;DP=757;FS=0.000;HRun=0;HaplotypeScore=178.1807;InbreedingCoeff=0.5457;MQ=63.71;MQ0=5;MQRankSum=-1.090;QD=14.90;ReadPosRankSum=1.444;VQSLOD=4.5111;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:24,20:44:57.09:882,57,0	0/0:8,0:17:23.11:0,23,364	0/0:34,0:26:8.96:0,9,149	0/0:28,0:23:5.52:0,6,100	1/1:5,11:18:18.05:268,18,0	0/1:11,2:26:22.69:23,0,85	0/1:17,2:40:69.04:69,0,117	0/1:19,0:29:22.03:22,0,74	0/0:16,0:32:39.13:0,39,705	1/1:11,8:21:27.05:365,27,0	1/1:3,14:19:45.14:678,45,0	1/1:11,11:25:48.13:683,48,0	0/0:20,0:27:36.12:0,36,659	1/1:6,19:25:36.12:575,36,0	1/1:15,22:40:63.19:926,63,0	1/1:15,15:31:60.17:896,60,0	0/0:13,0:22:20.97:0,21,399	1/1:8,7:17:24.07:343,24,0	0/1:11,1:17:25.12:25,0,70	0/1:8,1:24:8.70:9,0,157	0/1:23,3:53:82.10:82,0,273	0/0:18,0:34:36:0,36,637	1/1:7,15:21:30.10:479,30,0	1/1:10,28:42:57.19:910,57,0	1/1:7,7:15:24.08:363,24,0	0/0:11,0:24:38.78:0,39,210	0/0:12,0:20:21.66:0,22,113	0/0:2,0:7:10.98:0,11,49
chr10	41588538	.	ACATACACACG	A	2301.86	PASS	AB=0.769;AC=4;AF=0.071;AN=56;BaseQRankSum=9.290;DP=935;FS=1.129;HRun=0;HaplotypeScore=321.2350;InbreedingCoeff=0.4838;MQ=60.78;MQ0=5;MQRankSum=-7.416;QD=24.49;ReadPosRankSum=-3.689;VQSLOD=1.8084;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,29:43:46.24:1126,46,0	0/0:13,0:13:27.09:0,27,1267	0/0:50,0:31:68.82:0,69,1495	0/0:53,0:33:33.02:0,33,1796	0/0:29,0:29:35.71:0,36,2407	0/0:41,0:41:99:0,111,4812	0/0:35,0:35:90.31:0,90,3589	0/0:44,0:44:43.31:0,43,1581	0/0:37,0:37:93.32:0,93,4471	0/0:42,0:42:99:0,111,5144	0/0:30,0:30:72.25:0,72,3488	0/0:30,0:30:71.65:0,72,2351	0/0:40,0:40:99:0,101,4489	0/0:26,0:26:34.48:0,34,2003	0/0:46,0:46:75.51:0,76,4954	0/1:5,31:36:99:1280,0,100	0/0:20,0:20:30.64:0,31,1533	0/0:20,0:19:29.05:0,29,1939	0/1:15,0:15:4.89:5,0,739	0/0:26,0:26:63.33:0,63,2332	0/0:63,0:63:91.89:0,92,4304	0/0:38,0:38:93.22:0,93,3954	0/0:16,0:16:27.09:0,27,930	0/0:42,0:42:54.80:0,55,2855	0/0:23,0:23:69.23:0,69,2925	0/0:35,0:34:55.71:0,56,2814	0/0:28,0:28:74.57:0,75,2383	0/0:14,0:14:10.12:0,10,1140
chr10	41588826	.	ACATTTTAC	A	461.07	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=4.948;DP=604;FS=14.215;HRun=0;HaplotypeScore=144.3547;InbreedingCoeff=0.9510;MQ=75.37;MQ0=4;MQRankSum=-3.780;QD=20.05;ReadPosRankSum=-0.591;VQSLOD=2.1180;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,10:4:12.04:325,12,0	0/0:14,0:14:36.12:0,36,1553	0/0:28,0:23:69.23:0,69,2666	0/0:26,0:24:64.20:0,64,2195	0/0:21,0:21:57.20:0,57,2447	0/0:29,0:29:72.24:0,72,2970	0/0:16,0:16:48.16:0,48,2064	0/0:30,0:29:75.26:0,75,3189	0/0:13,0:13:36.12:0,36,1498	0/0:27,0:26:60.20:0,60,2457	0/0:26,0:26:73.49:0,73,3039	0/0:23,0:23:60.21:0,60,2373	0/0:22,0:22:60.21:0,60,2581	0/0:12,0:12:33.10:0,33,1316	0/0:28,0:28:78.27:0,78,3321	1/1:1,12:4:9.03:244,9,0	0/0:21,0:21:37.82:0,38,1761	0/0:10,0:9:24.08:0,24,1032	0/0:22,0:22:63.22:0,63,2504	0/0:31,0:31:72.25:0,72,3021	0/0:23,0:23:63.22:0,63,2635	0/0:27,0:27:81.27:0,81,3204	0/0:17,0:16:39.13:0,39,1524	0/0:26,0:26:78.27:0,78,3321	0/0:21,0:21:60.20:0,60,2421	0/0:25,0:25:63.22:0,63,2647	0/0:30,0:30:81.28:0,81,3490	0/0:13,0:13:39.13:0,39,1681
chr10	41588876	.	TTCTCTCTCTCTC	T	134.31	PASS	AC=6;AF=0.188;AN=32;BaseQRankSum=1.444;DP=510;FS=5.499;HRun=0;HaplotypeScore=154.1768;InbreedingCoeff=0.4434;MQ=55.69;MQ0=22;MQRankSum=0.466;QD=1.89;ReadPosRankSum=0.911;VQSLOD=2.2672;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:10:0.89:0,1,2	./.	./.	./.	./.	1/1:24,0:25:3.07:48,3,0	0/0:19,0:19:0.47:0,0,1	./.	0/0:14,0:14:9.03:0,9,251	0/0:17,0:16:3.75:0,4,10	./.	./.	0/0:24,0:24:15.05:0,15,426	0/0:8,0:8:9.03:0,9,203	1/1:27,2:29:5.49:166,5,0	0/0:19,0:15:10.54:0,11,228	0/0:15,0:15:2.97:0,3,20	0/0:12,0:11:12.89:0,13,320	./.	0/0:24,0:22:2.98:0,3,21	0/0:25,0:24:6.02:0,6,83	0/0:22,0:22:3:0,3,25	./.	./.	./.	0/0:26,0:26:6.19:0,6,22	1/1:17,0:17:2.90:16,3,0	./.
chr10	41589103	.	AG	A	7465.48	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=10.017;DP=711;FS=1.779;HRun=1;HaplotypeScore=107.4095;InbreedingCoeff=0.9165;MQ=80.96;MQ0=0;MQRankSum=0.252;QD=35.89;ReadPosRankSum=-1.017;VQSLOD=4.3855;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,99,1554	0/0:18,0:18:54.18:0,54,863	0/0:25,0:25:73.07:0,73,1058	0/1:13,0:13:10.13:10,0,277	0/0:18,0:18:51.17:0,51,809	0/0:24,0:24:72.19:0,72,1078	0/0:22,0:22:66.23:0,66,1055	1/1:0,37:37:99:1501,111,0	0/0:26,0:26:78.27:0,78,1247	0/0:26,0:26:75.25:0,75,1178	0/0:24,0:24:72.18:0,72,1118	0/0:25,0:25:75.17:0,75,1145	0/0:31,0:31:90.26:0,90,1383	0/0:29,0:29:87.27:0,87,1344	0/0:35,0:35:99:0,99,1582	0/0:30,0:30:90.28:0,90,1412	0/0:20,0:20:57.19:0,57,910	0/0:11,0:11:30.10:0,30,479	1/1:0,16:16:48.12:649,48,0	1/1:0,34:34:87.29:1216,87,0	1/1:0,39:39:99:1510,108,0	0/0:24,0:24:69.23:0,69,1093	0/0:19,0:19:54.18:0,54,863	0/0:35,0:35:99:0,102,1598	0/0:27,0:27:81.26:0,81,1262	1/1:1,30:31:42.27:1112,42,0	1/1:0,27:27:75.25:1048,75,0	1/1:0,11:11:30.10:420,30,0
chr10	41589657	.	G	GTTT	5495.96	PASS	AB=0.583;AC=29;AF=0.518;AN=56;BaseQRankSum=9.030;DP=596;FS=14.328;HRun=11;HaplotypeScore=103.3606;InbreedingCoeff=0.8786;MQ=72.42;MQ0=1;MQRankSum=-0.210;QD=16.31;ReadPosRankSum=-2.116;VQSLOD=1.3750;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,0:28:44.35:331,44,0	0/0:4,0:4:9.02:0,9,105	0/0:29,0:20:3.49:0,3,152	0/0:16,0:14:12.04:0,12,125	1/1:4,0:21:52.02:398,52,0	0/0:22,0:23:46.12:0,46,673	0/0:21,0:22:55.65:0,56,644	1/1:14,0:30:43.85:313,44,0	0/0:28,0:28:66.03:0,66,749	0/0:26,0:27:62.97:0,63,688	0/0:16,0:16:29.89:0,30,350	1/1:7,1:32:65.70:524,66,0	0/0:25,0:27:70.67:0,71,818	1/1:7,1:23:47.86:417,48,0	0/0:15,0:16:31.50:0,32,355	1/1:6,0:23:3.40:239,3,0	1/1:5,12:19:27.09:495,27,0	0/0:15,0:15:33.03:0,33,385	1/1:6,1:22:38.96:298,39,0	1/1:4,0:26:62.07:465,62,0	0/1:4,1:14:8.31:167,0,8	0/0:18,0:21:42.78:0,43,541	1/1:3,3:20:38.85:385,39,0	1/1:3,0:12:20.92:160,21,0	0/0:13,0:14:34.65:0,35,411	1/1:4,2:24:53.47:457,53,0	1/1:10,3:33:80.33:728,80,0	1/1:2,0:10:17.43:120,17,0
chr10	41590555	.	A	AC	2147.40	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=11.215;DP=605;FS=9.052;HRun=2;HaplotypeScore=61.7606;InbreedingCoeff=0.9986;MQ=82.29;MQ0=0;MQRankSum=-1.166;QD=34.09;ReadPosRankSum=1.921;VQSLOD=3.6302;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:81.21:0,81,986	0/0:10,0:10:27.08:0,27,324	0/0:18,0:18:30.26:0,30,387	0/0:17,0:17:38.11:0,38,402	0/0:23,0:23:57.11:0,57,668	0/0:20,0:20:60.19:0,60,743	0/0:20,0:20:59.93:0,60,702	0/0:27,0:27:69.06:0,69,801	0/0:27,0:27:78.24:0,78,962	0/0:35,0:35:99:0,99,1198	0/0:32,0:32:96.28:0,96,1166	1/1:0,17:17:48.16:673,48,0	0/0:12,0:12:36.09:0,36,422	0/0:15,0:15:42.13:0,42,516	0/0:22,0:22:63.18:0,63,768	0/0:16,0:16:48.11:0,48,577	0/0:14,0:14:42.13:0,42,520	0/0:16,0:16:45.14:0,45,557	0/0:15,0:15:42.13:0,42,519	0/0:32,0:32:93.15:0,93,1079	0/0:27,0:27:75.18:0,75,886	0/0:32,0:32:93.27:0,93,1128	1/1:2,25:27:69.11:945,69,0	1/1:0,19:19:48.16:673,48,0	0/0:23,0:23:69.18:0,69,838	0/0:27,0:27:81.18:0,81,970	0/0:27,0:26:75.23:0,75,926	0/0:8,0:8:24.08:0,24,297
chr10	41591219	.	G	GA	347.78	PASS	AB=0.879;AC=9;AF=0.161;AN=56;BaseQRankSum=5.222;DP=219;FS=5.336;HRun=0;HaplotypeScore=41.8376;InbreedingCoeff=-0.0536;MQ=72.47;MQ0=2;MQRankSum=-0.430;QD=3.41;ReadPosRankSum=0.704;VQSLOD=1.7240;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:20.25:0,20,113	0/0:1,0:1:3.01:0,3,42	0/0:19,0:9:17.40:0,17,170	0/1:24,0:12:1.91:2,0,144	0/0:5,0:5:15.05:0,15,209	0/0:5,0:5:15.04:0,15,192	0/0:3,0:3:9.03:0,9,126	0/1:16,0:12:46.79:47,0,116	0/0:4,0:3:6.02:0,6,84	0/0:7,0:7:21.07:0,21,293	0/0:3,0:3:9.03:0,9,126	0/0:10,0:10:18.06:0,18,249	0/0:1,0:1:3.01:0,3,42	0/0:1,0:1:3.01:0,3,42	0/0:5,0:5:15.05:0,15,209	0/0:4,0:4:0.30:0,0,17	0/0:11,0:11:28.45:0,28,375	0/0:3,0:3:6.02:0,6,84	0/1:15,2:16:74.97:75,0,149	0/1:5,2:7:17.08:17,0,41	1/1:7,2:8:5.94:42,6,0	0/0:2,0:2:6.02:0,6,84	0/0:7,0:7:14.87:0,15,185	0/0:10,0:10:21.50:0,21,272	0/0:7,0:7:21.04:0,21,247	0/1:10,3:13:16.86:137,0,17	0/1:5,5:10:51.61:101,0,52	0/1:6,0:5:49.73:59,0,50
chr10	41593098	.	CTG	C	3900.57	PASS	AB=0.923;AC=13;AF=0.232;AN=56;BaseQRankSum=1.109;DP=813;FS=0.797;HRun=0;HaplotypeScore=129.8779;InbreedingCoeff=0.8825;MQ=63.98;MQ0=9;MQRankSum=-1.135;QD=19.50;ReadPosRankSum=3.534;VQSLOD=4.0223;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:75.25:0,75,1164	0/0:10,0:11:30.09:0,30,456	0/0:62,0:30:37.36:0,37,593	0/0:72,0:38:64.20:0,64,786	1/1:6,21:28:50.90:563,51,0	0/0:28,0:28:66.18:0,66,1005	0/0:31,0:31:69.22:0,69,1079	0/0:16,0:32:30.08:0,30,357	0/0:29,0:29:72.24:0,72,1139	0/0:7,0:26:32.53:0,33,286	0/0:7,0:22:20.38:0,20,155	1/1:6,21:28:47.98:560,48,0	0/0:27,0:27:60.17:0,60,908	1/1:10,22:32:66.01:787,66,0	0/0:8,0:28:27.46:0,27,271	0/0:25,1:26:32.84:0,33,1001	1/1:8,23:31:57.13:672,57,0	0/0:8,0:13:11.97:0,12,116	0/0:10,0:24:15.21:0,15,282	0/0:7,0:24:44.81:0,45,397	0/0:7,0:29:44.85:0,45,379	0/1:22,2:24:9.56:10,0,824	1/1:3,22:25:39.01:473,39,0	1/1:3,28:31:69.21:837,69,0	0/0:7,0:19:11.34:0,11,104	0/0:6,0:25:36.62:0,37,452	0/0:13,0:40:68.88:0,69,667	0/0:2,0:4:9.01:0,9,90
chr10	41593223	.	AG	A	1345.24	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.703;DP=631;FS=1.355;HRun=1;HaplotypeScore=59.6551;InbreedingCoeff=0.9848;MQ=86.77;MQ0=0;MQRankSum=-4.264;QD=31.28;ReadPosRankSum=0.961;VQSLOD=3.3485;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,20:20:51.17:712,51,0	0/0:8,0:8:24.08:0,24,365	0/0:26,0:26:75.25:0,75,1119	0/0:18,0:18:44.57:0,45,623	0/0:26,0:26:78.26:0,78,1189	0/0:25,0:25:75.25:0,75,1148	0/0:27,0:27:81.26:0,81,1214	0/0:33,0:33:99:0,99,1400	0/0:32,0:32:96.33:0,96,1469	0/0:35,0:35:99:0,105,1514	0/0:20,0:20:60.20:0,60,918	0/0:25,0:25:75.21:0,75,1081	0/0:17,0:17:51.14:0,51,736	0/0:19,0:19:57.19:0,57,872	0/0:21,0:21:63.20:0,63,940	1/1:1,22:23:14.29:751,14,0	0/0:20,0:20:57.13:0,57,802	0/0:10,0:10:30.10:0,30,459	0/0:28,0:28:84.23:0,84,1166	0/0:28,0:28:84.24:0,84,1220	0/0:18,0:18:51.14:0,51,737	0/0:31,0:31:93.24:0,93,1314	0/0:23,0:23:69.23:0,69,1052	0/0:21,0:21:60.17:0,60,875	0/0:18,0:18:54.17:0,54,805	0/0:33,0:33:99:0,99,1496	0/0:20,0:20:60.19:0,60,895	0/0:6,0:6:18.04:0,18,252
chr10	41594881	.	G	GTA	1388.41	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-5.824;DP=643;FS=8.684;HRun=0;HaplotypeScore=78.1978;InbreedingCoeff=0.9960;MQ=73.37;MQ0=0;MQRankSum=-0.766;QD=28.93;ReadPosRankSum=1.102;VQSLOD=4.6003;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:81.08:0,81,1032	0/0:8,0:8:21.06:0,21,260	0/0:18,0:19:32.88:0,33,383	0/0:16,0:15:30.03:0,30,334	0/0:32,0:32:93.27:0,93,1168	0/0:22,0:21:51.16:0,51,647	0/0:11,0:11:27.07:0,27,326	0/0:41,0:41:87.26:0,87,1106	0/0:23,0:23:60.18:0,60,764	0/0:28,0:28:78.25:0,78,1014	0/0:31,0:31:78.24:0,78,998	1/1:1,13:14:27.09:459,27,0	0/0:15,0:15:36.11:0,36,456	0/0:22,0:22:63.20:0,63,808	0/0:32,0:32:81.26:0,81,1052	0/0:21,0:21:54.16:0,54,687	0/0:22,0:22:48.11:0,48,599	0/0:23,0:23:57.02:0,57,715	0/0:20,0:20:48.15:0,48,612	0/0:19,0:19:51.16:0,51,651	0/0:25,0:25:66.20:0,66,843	0/0:13,0:13:36.11:0,36,454	1/1:4,17:21:42.14:714,42,0	1/1:4,9:13:21.07:357,21,0	0/0:24,0:24:63.18:0,63,789	0/0:31,0:31:90.29:0,90,1170	0/0:29,0:29:78.24:0,78,987	0/0:26,0:26:72.23:0,72,932
chr10	41595091	.	T	TTTG	1270.85	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-3.698;DP=577;FS=4.865;HRun=0;HaplotypeScore=95.4812;InbreedingCoeff=0.8601;MQ=67.15;MQ0=0;MQRankSum=-1.039;QD=48.88;ReadPosRankSum=2.658;VQSLOD=6.1125;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,117,2109	0/0:6,0:6:18.06:0,18,328	0/0:28,0:26:75.16:0,75,1299	0/0:31,0:31:81.26:0,81,1407	0/0:24,0:24:69.22:0,69,1253	0/0:31,0:30:90.24:0,90,1639	0/0:20,0:20:59.87:0,60,1066	0/0:38,0:38:99:0,111,1978	0/0:20,0:20:60.17:0,60,1053	0/0:23,0:23:69.23:0,69,1255	0/0:11,0:11:33.10:0,33,582	0/0:19,0:19:57.20:0,57,1044	0/0:16,0:16:48.16:0,48,887	0/0:23,0:23:69.22:0,69,1255	0/0:27,0:27:78.25:0,78,1416	0/0:8,0:8:24.08:0,24,447	1/1:1,23:26:5.44:1351,5,0	0/0:25,0:25:68.86:0,69,1280	0/0:11,0:11:33.11:0,33,615	0/0:14,0:14:42.13:0,42,732	0/0:20,0:20:57.17:0,57,1029	0/0:14,0:14:42.11:0,42,720	0/0:21,0:21:60.21:0,60,1118	0/0:16,0:16:48.16:0,48,894	0/0:14,0:14:42.14:0,42,776	0/0:21,0:21:60.21:0,60,1119	0/0:18,0:18:54.17:0,54,964	0/0:10,0:10:30.10:0,30,553
chr10	41595424	.	CTATATATATATATATATATATATATATATATATATATATATATATATA	C	786.24	PASS	AC=4;AF=0.167;AN=24;BaseQRankSum=2.525;DP=94;FS=0.000;HRun=0;HaplotypeScore=111.2155;InbreedingCoeff=0.4263;MQ=89.42;MQ0=9;MQRankSum=-2.823;QD=56.16;ReadPosRankSum=1.634;VQSLOD=1.8619;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:2,0:2:6.02:0,6,98	./.	./.	0/0:26,0:8:15:0,15,207	0/0:7,0:7:6.02:0,6,128	./.	./.	0/0:4,0:4:6.02:0,6,474	./.	./.	./.	./.	./.	0/0:4,0:4:6.02:0,6,146	./.	./.	0/0:8,0:7:15.05:0,15,2085	0/0:4,0:3:9.03:0,9,1376	0/0:1,0:1:3.01:0,3,174	./.	./.	./.	1/1:1,3:4:6.02:513,6,0	1/1:8,2:10:3.01:360,3,0	./.	0/0:1,0:1:3:0,3,25	./.	0/0:2,0:2:6.02:0,6,473
chr10	41595480	.	ATG	A	922.51	PASS	AC=22;AF=0.458;AN=48;BaseQRankSum=1.798;DP=166;FS=11.813;HRun=0;HaplotypeScore=43.0280;InbreedingCoeff=0.7570;MQ=59.75;MQ0=4;MQRankSum=1.098;QD=17.41;ReadPosRankSum=-0.115;VQSLOD=2.1050;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,0:3:8.98:72,9,0	./.	0/0:12,0:9:19.45:0,19,169	0/0:19,0:7:7.87:0,8,79	0/0:11,0:11:8.78:0,9,70	0/0:4,0:4:11.99:0,12,100	0/0:4,0:4:11.98:0,12,98	1/1:1,9:10:26.91:217,27,0	0/0:4,0:4:11.98:0,12,99	1/1:1,2:3:8.99:76,9,0	./.	0/0:11,0:11:5.97:0,6,46	0/0:6,0:6:17.94:0,18,143	0/0:11,0:11:11.99:0,12,100	1/1:7,0:7:20.98:175,21,0	./.	0/0:8,0:8:20.95:0,21,167	1/1:12,0:11:20.85:160,21,0	./.	1/1:4,0:4:8.99:74,9,0	1/1:1,0:1:3:25,3,0	0/0:2,0:2:3:0,3,25	0/0:13,0:13:4.24:0,4,27	0/0:6,0:6:0.47:0,0,1	1/1:5,0:5:14.99:128,15,0	1/1:3,0:3:9:81,9,0	1/1:2,0:2:5.99:48,6,0	1/1:3,0:3:5.97:48,6,0
chr10	41595788	.	G	GTA	1078.27	PASS	AB=0.625;AC=3;AF=0.058;AN=52;BaseQRankSum=5.360;DP=497;FS=1.690;HRun=0;HaplotypeScore=77.6160;InbreedingCoeff=0.6270;MQ=54.76;MQ0=3;MQRankSum=-1.547;QD=34.78;ReadPosRankSum=-0.525;VQSLOD=5.1968;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:69.21:0,69,901	0/0:7,0:7:21.07:0,21,280	./.	./.	1/1:3,13:16:39.13:654,39,0	0/0:22,0:22:66.22:0,66,878	0/0:10,0:10:21.05:0,21,259	0/0:31,0:30:63.19:0,63,835	0/0:15,0:15:45.13:0,45,582	0/0:47,0:46:99:0,129,1706	0/0:11,0:10:27.09:0,27,359	0/0:15,0:15:42.14:0,42,559	0/0:19,0:19:51.11:0,51,643	0/1:6,9:15:40.44:529,0,40	0/0:28,0:28:84.28:0,84,1116	0/0:13,0:13:33.11:0,33,439	0/0:28,0:28:78.17:0,78,999	0/0:20,0:20:54.18:0,54,719	0/0:14,0:13:27.07:0,27,343	0/0:13,0:13:36.12:0,36,479	0/0:11,0:11:30.10:0,30,399	0/0:22,0:22:63.20:0,63,825	0/0:27,0:27:72.22:0,72,943	0/0:11,0:11:30.09:0,30,384	0/0:18,0:18:42.14:0,42,559	0/0:23,0:23:60.18:0,60,773	0/0:31,0:31:81.25:0,81,1051	0/0:6,0:6:12.04:0,12,160
chr10	41595870	.	TTG	T	1574.72	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=10.073;DP=586;FS=3.996;HRun=0;HaplotypeScore=83.1924;InbreedingCoeff=0.9935;MQ=63.45;MQ0=0;MQRankSum=-8.929;QD=38.41;ReadPosRankSum=0.974;VQSLOD=5.8412;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:66.23:0,66,1340	0/0:10,0:10:30.09:0,30,570	0/0:25,0:23:66.22:0,66,1262	0/0:26,0:25:72.25:0,72,1464	1/1:0,27:27:69.23:1054,69,0	0/0:20,0:20:60.19:0,60,1148	0/0:18,0:18:54.17:0,54,1026	0/0:33,0:33:96.33:0,96,1941	0/0:20,0:20:60.21:0,60,1219	0/0:30,0:30:90.31:0,90,1792	0/0:20,0:20:60.21:0,60,1218	0/0:17,0:17:51.17:0,51,1018	0/0:7,0:7:21.07:0,21,388	1/1:0,14:14:42.14:642,42,0	0/0:18,0:18:54.19:0,54,1091	0/0:18,0:18:54.19:0,54,1091	0/0:22,0:22:66.23:0,66,1341	0/0:22,0:22:66.23:0,66,1341	0/0:19,0:19:57.20:0,57,1155	0/0:22,0:22:66.23:0,66,1324	0/0:23,0:23:69.24:0,69,1402	0/0:28,0:28:84.28:0,84,1673	0/0:25,0:25:66.23:0,66,1329	0/0:20,0:20:54.19:0,54,1097	0/0:24,0:24:72.25:0,72,1445	0/0:21,0:21:63.22:0,63,1274	0/0:29,0:29:87.30:0,87,1732	0/0:6,0:6:18.06:0,18,366
chr10	41596327	.	A	AAC	16559.38	PASS	AB=0.622;AC=37;AF=0.661;AN=56;BaseQRankSum=1.607;DP=880;FS=1.446;HRun=0;HaplotypeScore=172.2625;InbreedingCoeff=0.7468;MQ=66.28;MQ0=5;MQRankSum=-5.515;QD=26.58;ReadPosRankSum=0.625;VQSLOD=5.3375;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,45:56:99:1975,125,0	0/0:13,0:15:32.77:0,33,358	0/0:59,0:49:73.94:0,74,853	0/0:41,0:31:5.89:0,6,454	1/1:31,0:30:1.30:5,1,0	0/0:21,0:21:57.18:0,57,696	0/0:18,0:20:44.46:0,44,500	1/1:16,30:47:59.94:1378,60,0	0/0:28,0:28:57.18:0,57,696	1/1:16,19:35:69.20:1086,69,0	1/1:7,14:21:24.76:723,25,0	1/1:3,1:27:57:523,57,0	0/0:25,0:26:63.03:0,63,747	1/1:25,0:27:17.84:144,18,0	0/1:16,11:27:49.80:736,0,50	1/1:6,32:38:10.95:1173,11,0	1/1:8,21:30:26.21:877,26,0	1/1:4,14:18:45.15:717,45,0	0/1:8,11:18:19.68:365,0,20	1/1:10,26:37:63.20:1000,63,0	1/1:8,27:36:75.26:1217,75,0	0/0:44,0:47:99:0,120,1374	1/1:6,2:29:47.85:447,48,0	1/1:6,2:34:51.01:494,51,0	1/1:7,19:26:29.55:961,30,0	1/1:11,28:39:84.29:1355,84,0	1/1:8,23:32:23.54:886,24,0	0/1:1,11:12:0.54:499,0,1
chr10	41596400	.	AAAG	A	4364.35	PASS	AB=0.941;AC=11;AF=0.196;AN=56;BaseQRankSum=4.976;DP=751;FS=6.510;HRun=0;HaplotypeScore=182.4505;InbreedingCoeff=0.8950;MQ=81.77;MQ0=0;MQRankSum=-4.705;QD=31.86;ReadPosRankSum=1.316;VQSLOD=4.5328;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,117,2528	0/0:14,0:14:42.14:0,42,896	0/0:26,0:26:66.20:0,66,1317	0/0:33,0:31:78.26:0,78,1618	0/0:34,0:34:96.29:0,96,2076	0/0:24,0:24:72.25:0,72,1600	0/0:14,0:14:42.14:0,42,920	0/0:36,0:36:99:0,99,2109	0/0:21,0:21:60.18:0,60,1235	1/1:2,25:27:75.23:1174,75,0	1/1:1,21:22:57.15:900,57,0	0/0:29,0:29:69.20:0,69,1398	0/0:31,0:31:93.32:0,93,2069	0/0:25,0:25:62.87:0,63,1342	1/1:1,19:20:54.14:840,54,0	0/0:28,0:28:69.24:0,69,1503	0/0:27,0:27:66.23:0,66,1442	1/1:1,9:10:30.10:490,30,0	0/0:19,0:19:54.16:0,54,1145	0/0:30,0:30:78.25:0,78,1667	0/0:40,0:40:99:0,108,2408	0/0:31,0:31:81.02:0,81,1651	0/0:22,0:22:48.16:0,48,1070	0/0:33,0:33:72.25:0,72,1591	1/1:5,21:26:63.15:950,63,0	0/1:30,2:32:10.72:11,0,1683	0/0:33,0:33:84.29:0,84,1823	0/0:19,0:19:54.18:0,54,1128
chr10	41597176	.	T	TAGGTATATTGAGGTATACCTATTGAGTATTG	16557.13	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.258;DP=728;FS=2.917;HRun=0;HaplotypeScore=532.1989;InbreedingCoeff=0.9887;MQ=72.69;MQ0=0;MQRankSum=-13.068;QD=206.96;ReadPosRankSum=0.052;VQSLOD=4.4518;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,102,7097	0/0:10,0:10:27.08:0,27,1556	0/0:28,0:27:57.19:0,57,2564	0/0:22,0:22:56.76:0,57,2528	0/0:37,0:37:99:0,105,7316	0/0:19,0:19:57.20:0,57,3865	0/0:29,0:29:66.23:0,66,4321	0/0:33,0:33:87.30:0,87,4959	0/0:30,0:30:75.26:0,75,5827	0/0:26,0:26:75.26:0,75,5176	0/0:22,0:22:60.19:0,60,3822	1/1:23,2:28:72.18:6481,72,0	0/0:33,0:33:90.29:0,90,6016	0/0:20,0:20:57.20:0,57,3692	0/0:30,0:30:84.27:0,84,5453	0/0:24,0:24:69.24:0,69,4931	0/0:21,0:21:51.13:0,51,2907	0/0:14,0:14:39.13:0,39,2659	0/0:36,0:35:96.30:0,96,4815	0/0:27,0:27:75.24:0,75,5426	0/0:45,0:45:99:0,126,8475	0/0:22,0:22:66.21:0,66,4843	1/1:27,3:33:84.20:7536,84,0	1/1:17,0:19:35.99:2540,36,0	0/0:35,0:35:96.33:0,96,6241	0/0:24,0:24:72.24:0,72,4473	0/0:19,0:19:57.20:0,57,4130	0/0:5,0:5:12.04:0,12,832
chr10	41598345	.	C	CT	112.18	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=4.530;DP=604;FS=16.299;HRun=2;HaplotypeScore=73.3886;InbreedingCoeff=0.8955;MQ=64.49;MQ0=0;MQRankSum=-4.177;QD=8.01;ReadPosRankSum=-1.796;VQSLOD=-0.6033;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:51:99:0,153,1867	0/0:16,0:16:48.13:0,48,569	0/0:34,0:25:67.56:0,68,804	0/0:40,0:32:79.39:0,79,939	0/0:20,0:15:39.11:0,39,472	0/0:20,0:20:57.18:0,57,707	0/0:20,0:20:60.18:0,60,731	0/0:19,0:17:39.12:0,39,483	0/0:28,0:28:81.20:0,81,964	0/0:34,0:34:99:0,99,1218	0/0:17,0:17:51.15:0,51,619	1/1:0,2:2:6.02:86,6,0	0/0:13,0:13:36.10:0,36,432	0/0:14,0:14:36.02:0,36,410	0/0:17,0:17:48.13:0,48,581	0/0:22,0:22:63.15:0,63,751	0/0:33,0:32:96.26:0,96,1159	0/0:23,0:22:63.15:0,63,740	0/0:16,0:16:45.13:0,45,547	0/0:25,0:25:72.22:0,72,881	0/0:20,0:20:51.13:0,51,617	0/0:22,0:22:66.21:0,66,814	1/1:1,8:4:8.90:60,9,0	1/1:0,3:3:6.02:86,6,0	0/0:12,0:11:36.11:0,36,436	0/0:37,0:37:99:0,102,1239	0/0:25,0:25:72.23:0,72,892	0/0:9,0:9:27.08:0,27,335
chr10	41598361	.	GGGGGGGTGGTA	G	169.12	PASS	AB=0.813;AC=6;AF=0.107;AN=56;BaseQRankSum=5.308;DP=628;FS=4.277;HRun=0;HaplotypeScore=202.5028;InbreedingCoeff=0.6293;MQ=65.75;MQ0=3;MQRankSum=-2.894;QD=7.05;ReadPosRankSum=-1.815;VQSLOD=2.5112;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:51:99:0,144,7694	0/0:16,0:16:48.16:0,48,2504	0/0:41,0:29:65.34:0,65,3142	0/0:40,0:36:76.42:0,76,3515	0/0:21,0:15:6.64:0,7,899	0/0:19,0:19:57.17:0,57,2594	0/0:20,0:20:60.21:0,60,3161	0/0:15,0:15:42.14:0,42,2130	0/0:29,0:29:84.29:0,84,4660	0/0:39,0:39:99:0,111,5261	0/0:20,0:20:60.21:0,60,2993	1/1:1,1:2:6.02:132,6,0	0/0:14,0:14:42.14:0,42,1986	0/1:14,0:14:26.22:26,0,763	0/0:22,0:22:60.21:0,60,3065	0/0:22,0:22:63.22:0,63,3642	0/0:31,0:30:87.09:0,87,4796	0/0:19,0:18:48.16:0,48,2677	0/0:22,0:22:56.93:0,57,2851	0/0:22,0:22:63.22:0,63,3497	0/0:31,0:30:66.70:0,67,3413	0/0:25,0:25:75.21:0,75,3833	0/1:2,3:4:0:0,0,0	1/1:2,1:3:6.02:121,6,0	0/0:11,0:10:33.11:0,33,1905	0/0:38,0:38:99:0,114,5886	0/0:25,0:25:72.23:0,72,3773	0/0:8,0:8:24.08:0,24,1331
chr10	41598408	.	G	GGTGT	269.99	PASS	AB=0.972;AC=5;AF=0.093;AN=54;BaseQRankSum=6.477;DP=715;FS=2.236;HRun=0;HaplotypeScore=163.6289;InbreedingCoeff=0.6841;MQ=62.34;MQ0=16;MQRankSum=-3.561;QD=7.11;ReadPosRankSum=-4.343;VQSLOD=1.7987;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:37:58.70:0,59,997	0/0:14,0:13:21.07:0,21,370	0/0:63,0:32:60.14:0,60,978	0/0:79,0:48:51.36:0,51,1089	./.	0/0:19,0:19:50.85:0,51,864	0/0:27,0:26:57.18:0,57,952	0/0:32,0:31:65.53:0,66,1176	0/0:19,0:20:54.17:0,54,886	0/0:34,0:32:87.30:0,87,1517	0/0:29,0:28:66.22:0,66,1141	0/1:4,0:3:5.81:7,0,6	0/0:16,0:16:48.16:0,48,848	1/1:13,3:16:18.05:359,18,0	0/0:18,0:18:45.15:0,45,760	0/0:20,0:20:35.91:0,36,575	0/0:27,0:27:54.18:0,54,923	0/0:31,0:31:69.23:0,69,1174	0/0:23,0:23:35.08:0,35,710	0/0:17,0:17:29.76:0,30,456	0/0:36,0:36:17.97:0,18,599	0/0:31,0:31:69.24:0,69,1197	0/1:7,0:6:0.01:0,0,0	0/1:10,0:11:0:1,0,0	0/0:13,0:12:32.94:0,33,534	0/0:34,0:34:77.88:0,78,1376	0/0:19,0:19:13.22:0,13,562	0/0:9,0:9:17.93:0,18,280
chr10	41598416	.	T	TGTGTGCGC	568.54	PASS	AB=1.000;AC=5;AF=0.093;AN=54;BaseQRankSum=4.304;DP=688;FS=0.000;HRun=0;HaplotypeScore=193.2880;InbreedingCoeff=0.7601;MQ=56.77;MQ0=17;MQRankSum=-4.512;QD=15.37;ReadPosRankSum=-1.515;VQSLOD=2.5112;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:34:55.86:0,56,1567	0/0:11,0:10:21.07:0,21,599	0/0:53,0:25:60.61:0,61,1485	0/0:70,0:36:57.73:0,58,1808	./.	0/0:21,0:21:60.21:0,60,1595	0/0:29,0:28:66.17:0,66,1681	0/0:33,0:31:82.02:0,82,1991	0/0:20,0:20:57.17:0,57,1511	0/0:38,0:36:99:0,102,2757	0/0:27,0:26:66.23:0,66,1904	0/0:4,0:3:5.49:0,5,49	0/0:16,0:16:48.16:0,48,1400	1/1:6,11:18:17.85:658,18,0	0/0:19,0:19:51.16:0,51,1352	0/0:17,0:17:35.81:0,36,871	0/0:30,0:30:57.06:0,57,1376	0/0:31,0:31:84.25:0,84,2141	0/0:22,0:21:60:0,60,1379	0/0:17,0:16:16.45:0,16,645	0/0:40,0:38:52.90:0,53,1150	0/0:26,0:26:69.24:0,69,2000	1/1:7,0:6:0.46:1,0,0	0/1:12,0:11:0:1,0,0	0/0:14,0:13:38.94:0,39,914	0/0:30,0:30:78.23:0,78,2312	0/0:18,0:18:35.82:0,36,932	0/0:6,0:6:18.05:0,18,464
chr10	41598417	.	GCGCA	G	463.85	PASS	AB=0.837;AC=10;AF=0.185;AN=54;BaseQRankSum=7.864;DP=675;FS=9.164;HRun=0;HaplotypeScore=143.3780;InbreedingCoeff=0.2259;MQ=56.28;MQ0=16;MQRankSum=-4.778;QD=3.39;ReadPosRankSum=-3.302;VQSLOD=1.2013;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:34:30.85:0,31,1484	0/0:11,0:10:21.07:0,21,565	0/0:55,0:25:60.12:0,60,1373	0/0:68,0:34:35.41:0,35,1606	./.	0/0:21,0:21:60.21:0,60,1669	0/0:28,0:27:66.17:0,66,1788	0/1:28,4:30:55.61:56,0,1806	0/0:20,0:21:60.19:0,60,1580	0/0:37,1:36:99:0,108,3001	0/0:26,1:26:65.96:0,66,1794	1/1:0,3:3:9.01:139,9,0	0/0:16,0:16:48.16:0,48,1381	0/0:15,0:15:3.64:0,4,36	0/0:19,0:19:51.18:0,51,1408	0/0:16,0:16:36.08:0,36,885	0/0:29,0:29:10.02:0,10,1359	0/0:31,0:31:73.17:0,73,2249	0/1:19,3:21:99:125,0,1178	0/1:15,2:16:0.57:1,0,577	0/1:40,0:38:99:221,0,970	0/0:27,0:27:72.25:0,72,2015	0/1:0,5:5:0:0,0,0	1/1:1,9:10:0.34:0,0,0	0/0:14,0:13:38.96:0,39,981	0/0:30,0:30:57.87:0,58,2214	0/0:17,0:18:12.34:0,12,915	0/1:5,1:6:44.05:44,0,416
chr10	41598419	.	GCA	G	194.79	PASS	AB=0.968;AC=7;AF=0.130;AN=54;BaseQRankSum=7.967;DP=673;FS=21.211;HRun=0;HaplotypeScore=124.4968;InbreedingCoeff=0.3165;MQ=54.36;MQ0=17;MQRankSum=-3.361;QD=2.09;ReadPosRankSum=-3.068;VQSLOD=-0.2907;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,1:34:44.49:0,44,1027	0/0:14,0:13:27.02:0,27,453	0/0:49,0:22:54.16:0,54,1001	0/0:69,0:31:38.84:0,39,1152	./.	0/0:21,0:21:60.20:0,60,1164	0/0:27,1:27:66.20:0,66,1232	0/0:29,1:28:4.29:0,4,1225	0/0:20,0:20:57.18:0,57,1091	0/0:39,0:37:99:0,111,2062	0/0:25,0:24:66.22:0,66,1284	1/1:3,0:3:6.49:68,6,0	0/0:18,0:18:54.16:0,54,1013	0/0:15,0:15:9.38:0,9,28	0/0:19,0:19:51.17:0,51,968	0/0:15,0:15:32.87:0,33,615	0/0:28,1:29:20.65:0,21,939	0/0:31,0:31:73.12:0,73,1540	0/1:23,0:22:66.02:66,0,839	0/0:16,0:15:12.21:0,12,392	0/1:39,1:38:99:150,0,651	0/0:28,0:28:72.23:0,72,1389	0/1:5,0:5:0:0,0,0	0/1:11,2:12:0.13:0,0,0	0/0:13,0:12:35.99:0,36,636	0/0:30,0:30:76.81:0,77,1554	0/0:17,0:18:25.33:0,25,647	0/1:8,0:7:23.44:23,0,283
chr10	41598427	.	GCGT	G	87.08	PASS	AC=6;AF=0.111;AN=54;BaseQRankSum=4.404;DP=679;FS=3.207;HRun=0;HaplotypeScore=140.8570;InbreedingCoeff=0.7960;MQ=51.79;MQ0=22;MQRankSum=-1.594;QD=3.11;ReadPosRankSum=-2.516;VQSLOD=2.2722;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:33:44.44:0,44,702	0/0:11,0:11:24.08:0,24,503	0/0:39,0:9:23.41:0,23,259	0/0:65,0:26:12.40:0,12,774	./.	0/0:24,0:24:65.47:0,65,1307	0/0:32,0:31:77.84:0,78,1544	0/0:28,0:25:68.87:0,69,1027	0/0:21,0:21:57.19:0,57,1160	0/0:36,0:34:99:0,102,1822	0/0:29,0:28:72.23:0,72,1196	1/1:4,3:6:13.56:174,14,0	0/0:20,0:20:60.20:0,60,1241	0/0:19,0:19:25.24:0,25,221	0/0:20,0:19:51.17:0,51,877	0/0:16,0:16:27.07:0,27,411	0/0:30,0:30:49.31:0,49,713	0/0:31,0:31:78.17:0,78,1274	0/0:19,0:18:53.87:0,54,694	0/0:14,0:12:17.95:0,18,278	0/0:44,0:42:66.36:0,66,915	0/0:26,0:26:77.84:0,78,1609	1/1:1,4:6:0.45:0,0,0	1/1:7,7:13:0.99:4,1,0	0/0:14,0:13:36.10:0,36,615	0/0:29,0:29:75.22:0,75,1238	0/0:17,0:17:31.90:0,32,463	0/0:8,0:7:20.96:0,21,307
chr10	41598428	.	C	CGTGTGTGTGTGTGTGT	4738.26	PASS	AB=0.659;AC=28;AF=0.538;AN=52;BaseQRankSum=-0.508;DP=704;FS=7.048;HRun=0;HaplotypeScore=259.6944;InbreedingCoeff=0.6799;MQ=51.85;MQ0=22;MQRankSum=-5.338;QD=13.94;ReadPosRankSum=-4.533;VQSLOD=1.5002;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:21,14:43:2.12:224,2,0	0/0:11,0:11:14.64:0,15,410	./.	0/0:64,0:26:5.90:0,6,45	./.	0/0:22,0:24:44.68:0,45,1454	0/0:27,0:31:48.07:0,48,1392	1/1:28,0:25:24.06:431,24,0	0/0:20,0:20:32.72:0,33,873	0/0:23,0:34:15.39:0,15,1159	0/1:14,0:29:8.05:8,0,625	1/1:7,0:6:11.69:132,12,0	0/0:20,0:20:28.02:0,28,1252	1/1:17,0:19:10.31:86,10,0	0/0:9,0:20:30.10:0,30,629	1/1:7,8:19:3.01:228,3,0	0/1:15,0:30:15.96:321,0,16	0/0:11,0:33:15.21:0,15,1116	1/1:18,0:17:21.04:647,21,0	1/1:9,0:16:5.98:338,6,0	1/1:45,0:43:33.42:597,33,0	0/0:24,0:26:42.15:0,42,1773	1/1:7,0:7:0.47:1,0,0	1/1:15,0:13:3:30,3,0	0/0:6,0:13:20.99:0,21,392	1/1:16,13:32:36.56:985,37,0	1/1:9,6:17:6.96:339,7,0	1/1:8,0:7:9.03:372,9,0
chr10	41598848	.	A	AT	1482.40	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=6.498;DP=606;FS=9.083;HRun=7;HaplotypeScore=82.3017;InbreedingCoeff=0.9257;MQ=67.57;MQ0=0;MQRankSum=-1.158;QD=26.95;ReadPosRankSum=2.719;VQSLOD=4.1338;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,105,991	0/0:12,0:12:36.04:0,36,340	0/0:14,0:12:20.92:0,21,180	0/0:10,0:10:2.85:0,3,38	0/0:32,0:32:71.82:0,72,326	0/0:19,0:19:54.09:0,54,521	0/0:16,0:16:45.06:0,45,428	0/0:33,0:33:75.05:0,75,697	0/0:16,0:16:39.04:0,39,371	0/0:40,0:39:99:0,108,1021	0/0:19,0:19:51.07:0,51,488	1/1:3,13:16:39.12:465,39,0	0/0:17,0:17:48.08:0,48,463	0/0:18,0:18:41.61:0,42,211	0/0:38,0:38:99:0,105,1003	0/0:20,0:20:54.07:0,54,515	0/0:15,0:15:35.99:0,36,327	0/0:15,0:15:36.04:0,36,343	0/0:21,0:21:51.04:0,51,477	0/0:23,0:23:66.04:0,66,618	0/0:5,0:5:12.02:0,12,116	0/0:22,0:22:60.08:0,60,572	1/1:2,26:28:72.22:870,72,0	1/1:2,9:11:24.07:290,24,0	0/0:27,0:27:75.10:0,75,717	0/0:35,0:35:93.14:0,93,898	0/0:32,0:32:81.07:0,81,763	0/0:8,0:8:21.02:0,21,196
chr10	41598855	.	TAA	T	1464.60	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.350;DP=608;FS=2.853;HRun=6;HaplotypeScore=89.8425;InbreedingCoeff=0.8894;MQ=66.22;MQ0=0;MQRankSum=-1.383;QD=28.72;ReadPosRankSum=0.415;VQSLOD=3.3458;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,117,2048	0/0:15,0:15:42.14:0,42,707	0/0:10,0:9:23.46:0,23,317	0/0:9,0:9:1.65:0,2,99	1/1:3,30:33:81.26:1069,81,0	0/0:22,0:22:66.23:0,66,1156	0/0:18,0:18:51.17:0,51,899	0/0:29,0:29:72.24:0,72,1218	0/0:13,0:13:39.12:0,39,654	0/0:44,0:43:99:0,126,2165	0/0:18,0:18:54.17:0,54,902	0/0:14,0:14:39.12:0,39,454	0/0:16,0:16:48.16:0,48,852	1/1:3,15:18:39.12:516,39,0	0/0:39,0:39:99:0,111,1963	0/0:21,0:21:60.21:0,60,1058	0/0:18,0:18:45.15:0,45,782	0/0:14,0:14:42.13:0,42,705	0/0:20,0:20:54.17:0,54,926	0/0:27,0:27:78.26:0,78,1342	0/0:5,0:5:15.05:0,15,263	0/0:25,0:25:72.23:0,72,1233	0/0:30,0:30:81.24:0,81,983	0/0:8,0:8:24.07:0,24,277	0/0:26,0:26:72.25:0,72,1278	0/0:35,0:35:99:0,105,1851	0/0:31,0:31:87.30:0,87,1523	0/0:7,0:7:21.07:0,21,372
chr10	41598994	.	G	GA	1857.24	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-7.424;DP=645;FS=13.012;HRun=6;HaplotypeScore=68.0697;InbreedingCoeff=0.9944;MQ=86.26;MQ0=0;MQRankSum=-0.273;QD=27.72;ReadPosRankSum=2.675;VQSLOD=3.4394;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,147,1483	0/0:7,0:7:21.05:0,21,214	0/0:24,0:24:51.36:0,51,591	0/0:23,0:24:18.46:0,18,434	0/0:20,0:20:54.10:0,54,544	0/0:20,0:20:54.12:0,54,551	0/0:29,0:29:61.37:0,61,768	0/0:25,0:25:63.13:0,63,638	0/0:25,0:25:66.15:0,66,673	0/0:27,0:27:78.18:0,78,796	0/0:24,0:24:60.13:0,60,612	1/1:1,18:19:45.14:566,45,0	0/0:17,0:17:45.08:0,45,452	0/0:18,0:18:51.12:0,51,520	0/0:27,0:27:75.17:0,75,765	0/0:20,0:20:51.11:0,51,520	0/0:28,0:28:84.19:0,84,857	0/0:9,0:9:21.02:0,21,205	0/0:28,0:28:75.12:0,75,746	0/0:19,0:19:48.10:0,48,490	0/0:32,0:32:90.18:0,90,910	0/0:13,0:13:36.08:0,36,367	1/1:2,16:18:39.12:491,39,0	1/1:1,29:30:75.24:943,75,0	0/0:22,0:22:63.13:0,63,636	0/0:37,0:37:96.19:0,96,969	0/0:18,0:18:51.06:0,51,494	0/0:16,0:16:42.09:0,42,427
chr10	41599419	.	GCTCTCTCTCTCTCTCTCT	G	723.09	PASS	AB=0.844;AC=6;AF=0.115;AN=52;BaseQRankSum=4.511;DP=447;FS=0.000;HRun=0;HaplotypeScore=199.1130;InbreedingCoeff=0.2991;MQ=63.70;MQ0=16;MQRankSum=-5.301;QD=11.12;ReadPosRankSum=-3.170;VQSLOD=1.7402;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:15.05:0,15,756	0/0:9,0:9:6.02:0,6,314	./.	0/0:25,0:13:4.26:0,4,48	0/0:23,0:23:12.83:0,13,1630	0/0:22,0:22:25.33:0,25,580	0/0:12,0:12:24.05:0,24,434	0/0:29,0:27:15.52:0,16,508	0/0:3,6:10:2.69:0,3,198	0/0:33,0:33:28.34:0,28,1863	0/0:15,0:15:6.02:0,6,274	0/0:9,0:9:4.15:0,4,767	1/1:8,6:14:9.03:436,9,0	0/0:7,0:6:3.36:0,3,134	0/0:25,0:24:18.53:0,19,1156	0/0:9,0:9:12.04:0,12,547	./.	0/0:10,0:9:18.06:0,18,860	0/0:15,0:14:17.90:0,18,626	0/1:15,0:15:95.30:95,0,163	0/0:8,0:9:6.01:0,6,125	1/1:8,3:10:6.02:291,6,0	0/0:20,0:20:12.11:0,12,1106	0/0:13,0:10:8.65:0,9,489	0/0:25,0:24:9.03:0,9,365	0/0:14,0:13:15.05:0,15,597	0/1:17,0:23:19.61:20,0,626	0/0:7,0:6:5.96:0,6,43
chr10	41599433	.	T	TTG	420.67	PASS	AB=0.692;AC=3;AF=0.054;AN=56;BaseQRankSum=4.229;DP=486;FS=7.732;HRun=0;HaplotypeScore=105.6550;InbreedingCoeff=0.4587;MQ=50.27;MQ0=35;MQRankSum=1.013;QD=13.57;ReadPosRankSum=1.448;VQSLOD=3.1396;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:14:21.07:0,21,318	0/0:12,0:12:24.08:0,24,346	0/0:13,0:7:14.88:0,15,202	0/0:20,0:8:14.12:0,14,176	1/1:20,2:22:36.35:493,36,0	0/0:21,0:20:41.81:0,42,567	0/0:15,0:14:33.11:0,33,486	0/0:28,0:26:78.26:0,78,1169	0/0:9,0:8:3.01:0,3,46	0/0:31,0:30:87.29:0,87,1303	0/0:18,0:18:30.09:0,30,431	0/0:11,0:11:18.46:0,18,247	0/0:13,0:13:26.89:0,27,318	0/1:5,4:8:33.60:34,0,56	0/0:26,0:25:63.16:0,63,911	0/0:14,0:14:16.41:0,16,236	0/0:6,0:4:12.04:0,12,174	0/0:12,0:11:29.91:0,30,374	0/0:21,0:17:50.94:0,51,641	0/0:27,0:25:30.09:0,30,417	0/0:13,0:9:5.77:0,6,92	0/0:5,0:4:5.88:0,6,35	0/0:19,0:18:37.37:0,37,540	0/0:17,0:12:11.93:0,12,166	0/0:29,0:27:48.16:0,48,714	0/0:21,0:18:44.10:0,44,572	0/0:27,0:26:47.93:0,48,592	0/0:12,0:9:15.02:0,15,195
chr10	41599469	.	TCACACACACACACACACA	T	2311.67	PASS	AB=0.870;AC=12;AF=0.222;AN=54;BaseQRankSum=3.610;DP=399;FS=1.804;HRun=0;HaplotypeScore=181.3661;InbreedingCoeff=0.6115;MQ=43.49;MQ0=38;MQRankSum=-3.558;QD=22.44;ReadPosRankSum=-1.176;VQSLOD=2.7797;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:12:3.01:0,3,116	0/0:9,0:9:18.06:0,18,1333	./.	0/0:7,0:3:9.03:0,9,649	0/0:24,0:25:48.04:0,48,1958	0/0:19,0:18:26.16:0,26,1611	0/0:8,0:7:11.71:0,12,641	1/1:9,4:10:11.90:220,12,0	0/0:19,0:18:21.07:0,21,1496	0/0:14,0:19:42.14:0,42,1894	0/0:11,0:10:15.05:0,15,669	0/1:8,0:7:2.22:2,0,329	0/0:15,0:15:32.36:0,32,1581	0/0:14,0:13:20.31:0,20,852	0/0:12,0:11:20.80:0,21,981	0/0:3,0:13:11.73:0,12,93	0/0:11,0:9:15.48:0,15,569	0/0:11,0:10:24.08:0,24,1245	1/1:10,3:12:5.74:302,6,0	1/1:8,13:20:6.02:260,6,0	0/0:14,2:8:3.01:0,3,151	0/0:17,0:15:32.52:0,33,1876	0/0:9,0:9:1.55:0,2,21	0/0:25,0:20:15.05:0,15,935	0/0:16,0:14:23.75:0,24,1141	0/1:13,7:18:99:1007,0,143	1/1:12,7:19:11.99:321,12,0	1/1:5,3:5:9.03:355,9,0
chr10	41601004	.	CTCTGTCTGTCTG	C	420.70	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=2.328;DP=613;FS=0.000;HRun=0;HaplotypeScore=217.4478;InbreedingCoeff=0.8583;MQ=70.73;MQ0=3;MQRankSum=-2.952;QD=7.94;ReadPosRankSum=-2.224;VQSLOD=2.2587;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,25:34:6.02:210,6,0	0/0:10,0:10:17.61:0,18,698	0/0:30,0:24:12.38:0,12,238	0/0:22,0:20:14.92:0,15,199	0/0:15,0:15:20.73:0,21,520	0/0:18,0:18:33.11:0,33,1295	0/0:34,0:34:78.21:0,78,2237	0/0:21,0:21:30.10:0,30,736	0/0:25,0:25:60.19:0,60,2457	0/0:21,0:20:45.15:0,45,1342	0/0:12,0:12:16.92:0,17,458	0/0:29,0:29:60.21:0,60,2810	0/0:13,0:13:27.09:0,27,1258	0/0:29,0:29:58.28:0,58,2175	0/0:8,0:23:15.02:0,15,330	1/1:6,13:19:9.03:314,9,0	0/0:6,0:22:36.08:0,36,791	0/0:14,0:15:33.11:0,33,867	0/0:20,0:19:27.09:0,27,1084	0/0:16,0:16:36.10:0,36,1162	0/0:45,0:47:99:0,102,3787	0/0:19,0:18:36.09:0,36,1484	0/0:15,0:15:24.06:0,24,769	0/0:33,0:33:78.74:0,79,3575	0/0:14,0:13:18.38:0,18,734	0/0:24,0:24:42.11:0,42,1224	0/0:24,0:27:60.16:0,60,1895	0/0:6,0:6:18.06:0,18,985
chr10	41601348	.	CT	C	3418.49	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=12.326;DP=684;FS=1.840;HRun=4;HaplotypeScore=76.1924;InbreedingCoeff=0.9997;MQ=85.87;MQ0=0;MQRankSum=-3.138;QD=32.87;ReadPosRankSum=2.202;VQSLOD=4.3761;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:84.28:0,84,1159	0/0:9,0:9:27.05:0,27,356	0/0:25,0:25:69.19:0,69,903	0/0:33,1:31:78.09:0,78,972	1/1:1,20:21:54.16:647,54,0	0/0:28,0:28:81.27:0,81,1131	0/0:19,0:19:57.19:0,57,792	0/0:37,0:37:99:0,102,1372	0/0:31,0:31:93.30:0,93,1280	0/0:36,0:36:99:0,105,1447	0/0:25,0:25:69.20:0,69,929	1/1:0,21:21:63.19:756,63,0	0/0:28,0:28:81.27:0,81,1134	1/1:0,23:23:69.21:828,69,0	0/0:16,0:16:42.14:0,42,588	0/0:24,0:24:72.23:0,72,985	0/0:29,0:29:81.27:0,81,1130	0/0:15,0:15:45.15:0,45,627	0/0:31,0:31:90.29:0,90,1237	0/0:31,0:31:87.26:0,87,1167	0/0:15,0:15:45.15:0,45,624	0/0:28,0:28:81.27:0,81,1129	1/1:1,17:18:45.14:540,45,0	1/1:2,19:21:54.16:648,54,0	0/0:14,0:14:42.12:0,42,568	0/0:27,0:27:81.27:0,81,1131	0/0:34,0:34:99:0,99,1373	0/0:14,0:14:42.14:0,42,582
chr10	41601450	.	G	GTT	3223.06	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=2.696;DP=668;FS=6.748;HRun=8;HaplotypeScore=89.3441;InbreedingCoeff=0.9859;MQ=88.57;MQ0=0;MQRankSum=-2.174;QD=27.79;ReadPosRankSum=0.499;VQSLOD=3.3891;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:87.23:0,87,970	0/0:11,0:11:30.08:0,30,334	0/0:28,0:28:54.76:0,55,638	0/0:22,0:22:36.47:0,36,493	1/1:6,0:38:84:781,84,0	0/0:25,0:25:66.15:0,66,726	0/0:22,0:22:57.11:0,57,624	0/0:23,0:23:60.13:0,60,659	0/0:26,0:26:75.18:0,75,826	0/0:31,0:31:87.23:0,87,964	0/0:26,0:26:75.20:0,75,836	1/1:0,18:18:45.15:714,45,0	0/0:28,0:29:43.93:0,44,760	1/1:7,0:14:24.05:249,24,0	0/0:25,0:25:75.20:0,75,836	0/0:20,0:20:45.10:0,45,502	0/0:19,0:19:54.08:0,54,577	0/0:20,0:20:48:0,48,493	0/0:24,0:24:53.56:0,54,572	0/0:25,0:26:63.10:0,63,761	0/0:31,0:31:87.18:0,87,940	0/0:27,0:27:78.19:0,78,860	1/1:3,24:29:69.22:1055,69,0	1/1:2,15:17:39.12:598,39,0	0/0:19,0:19:56.89:0,57,614	0/0:33,0:33:93.21:0,93,1023	0/0:29,0:29:72.13:0,72,782	0/0:3,0:3:9.02:0,9,100
chr10	41602043	.	TA	T	10950.04	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=15.097;DP=670;FS=2.028;HRun=5;HaplotypeScore=83.2776;InbreedingCoeff=0.9975;MQ=91.71;MQ0=0;MQRankSum=-2.667;QD=29.76;ReadPosRankSum=2.937;VQSLOD=5.4353;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,32:34:93.27:1054,93,0	0/0:22,0:22:63.20:0,63,847	0/0:31,0:31:90.24:0,90,1148	0/0:24,0:24:35.75:0,36,755	1/1:1,32:33:90.19:1004,90,0	0/0:13,0:13:39.11:0,39,503	0/0:13,0:13:33.11:0,33,449	1/1:3,23:26:69.14:751,69,0	0/0:28,0:28:84.27:0,84,1132	0/0:33,0:33:90.29:0,90,1213	0/0:26,0:26:71.87:0,72,904	1/1:1,21:22:57:646,57,0	0/0:16,0:16:48.11:0,48,593	1/1:3,19:22:57.16:646,57,0	0/0:23,0:23:66.19:0,66,870	1/1:5,16:21:24.30:561,24,0	1/1:0,24:24:69.20:782,69,0	0/0:18,0:18:51.14:0,51,677	1/1:2,15:17:45.11:498,45,0	1/1:0,26:26:75.11:820,75,0	1/1:1,26:27:75.21:850,75,0	0/0:24,0:24:63.17:0,63,825	1/1:1,24:25:66.19:748,66,0	1/1:0,27:27:60.17:680,60,0	0/0:31,0:31:87.25:0,87,1169	1/1:3,24:27:72.16:789,72,0	1/1:1,30:31:84.24:952,84,0	1/1:0,6:6:15.04:170,15,0
chr10	41602938	.	GAGAGAGAGAC	G	2234.10	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=8.920;DP=736;FS=5.578;HRun=0;HaplotypeScore=194.5428;InbreedingCoeff=0.9435;MQ=59.88;MQ0=27;MQRankSum=-5.952;QD=21.69;ReadPosRankSum=0.492;VQSLOD=2.7367;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,105,4148	0/0:13,0:13:39.13:0,39,1459	0/0:50,0:19:11.39:0,11,356	0/0:83,0:21:29.84:0,30,774	0/0:15,0:14:21.07:0,21,761	0/0:30,0:30:72.25:0,72,3009	0/0:17,0:17:33.09:0,33,1291	0/0:32,0:32:78.18:0,78,1953	0/0:32,0:32:66.23:0,66,2979	1/1:3,13:16:29.49:645,29,0	1/1:4,18:21:15.05:385,15,0	0/0:20,0:20:48.16:0,48,1891	0/0:17,0:17:42.13:0,42,1658	0/0:19,0:19:42.14:0,42,1652	1/1:4,18:22:27.09:748,27,0	0/0:14,0:14:36.12:0,36,1171	0/0:24,0:24:54.19:0,54,2333	1/1:9,13:21:2.90:16,3,0	0/0:22,0:21:39.11:0,39,1367	0/0:25,0:25:66.65:0,67,1991	0/0:29,0:28:69.22:0,69,2700	0/0:19,0:19:42.61:0,43,1616	0/0:24,0:24:66.21:0,66,2087	0/0:27,0:26:52.77:0,53,2296	1/1:6,15:21:21.07:605,21,0	0/0:25,0:25:57.20:0,57,2271	0/0:35,0:35:93.30:0,93,3999	0/0:15,0:15:42.06:0,42,1794
chr10	41603436	.	TA	T	6292.33	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=11.910;DP=540;FS=6.125;HRun=2;HaplotypeScore=59.5673;InbreedingCoeff=0.9974;MQ=76.45;MQ0=0;MQRankSum=-0.031;QD=34.76;ReadPosRankSum=2.360;VQSLOD=5.1288;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:94.20:0,94,1394	0/0:6,0:6:18.06:0,18,270	0/0:17,0:16:42.61:0,43,605	0/0:14,0:12:26.83:0,27,366	1/1:2,18:20:48.16:623,48,0	0/0:13,0:13:39.13:0,39,585	0/0:11,0:11:33.10:0,33,469	0/0:33,0:33:96.28:0,96,1396	0/0:21,0:21:63.20:0,63,924	1/1:1,21:22:63.18:802,63,0	1/1:0,16:16:45.15:584,45,0	1/1:1,18:19:54.18:701,54,0	0/0:13,0:13:39.13:0,39,584	1/1:1,18:19:54.18:701,54,0	1/1:0,17:17:45.15:584,45,0	0/0:18,0:18:54.18:0,54,810	0/0:26,0:26:75.25:0,75,1124	1/1:0,22:22:66.21:857,66,0	0/0:18,0:17:48.16:0,48,713	0/0:28,0:28:84.28:0,84,1248	0/0:8,0:8:21.07:0,21,315	0/0:23,0:23:57.19:0,57,854	1/1:1,19:20:44.95:584,45,0	1/1:0,8:8:21.07:273,21,0	1/1:1,17:17:45.15:584,45,0	0/0:24,0:24:72.23:0,72,1060	0/0:22,0:22:66.22:0,66,989	0/0:29,0:29:87.29:0,87,1301
chr10	41603798	.	T	TC	784.15	PASS	AC=8;AF=0.222;AN=36;BaseQRankSum=6.719;DP=366;FS=0.900;HRun=1;HaplotypeScore=32.4236;InbreedingCoeff=0.6651;MQ=20.07;MQ0=185;MQRankSum=-0.295;QD=17.43;ReadPosRankSum=0.096;VQSLOD=3.6174;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/0:3,0:2:3.01:0,3,39	./.	./.	./.	0/0:16,0:8:9.03:0,9,116	0/0:17,0:5:15.05:0,15,194	./.	0/0:22,0:7:6:0,6,78	1/1:3,11:9:15.05:224,15,0	1/1:1,14:13:30.02:413,30,0	0/0:3,0:2:3.01:0,3,36	0/0:8,0:4:6.02:0,6,78	./.	1/1:1,4:2:3.01:45,3,0	0/0:20,0:9:15.05:0,15,192	0/0:23,0:3:3.01:0,3,39	./.	0/0:16,0:2:6.02:0,6,78	0/0:22,0:22:60.02:0,60,698	./.	0/0:23,0:23:45.53:0,46,545	./.	./.	1/1:1,10:10:18.05:233,18,0	0/0:16,0:11:32.93:0,33,385	0/0:15,0:11:24:0,24,274	0/0:5,0:4:6.02:0,6,78
chr10	41605827	.	T	TAC	2178.12	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=5.027;DP=880;FS=1.674;HRun=0;HaplotypeScore=172.9928;InbreedingCoeff=0.9366;MQ=58.52;MQ0=9;MQRankSum=1.441;QD=19.28;ReadPosRankSum=2.566;VQSLOD=3.5757;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:65.68:0,66,615	0/0:10,0:10:27.09:0,27,406	0/0:45,0:23:66.01:0,66,959	0/0:37,0:19:37.81:0,38,457	0/0:38,0:38:98.51:0,99,1291	0/0:25,0:25:69.21:0,69,992	0/0:26,0:26:64.44:0,64,922	0/0:32,0:32:90.27:0,90,1276	0/0:48,0:48:99:0,138,1953	1/1:6,21:27:63.17:910,63,0	1/1:3,12:16:2.91:47,3,0	0/0:38,0:38:90.12:0,90,1268	0/0:27,0:27:64.10:0,64,949	0/0:35,0:34:56.36:0,56,773	1/1:6,27:32:44.52:663,45,0	0/0:39,0:39:53.82:0,54,576	0/0:19,0:19:57.13:0,57,797	1/1:3,9:12:30.56:447,31,0	0/0:17,0:15:45.09:0,45,633	0/0:43,0:43:99:0,114,1638	0/0:61,0:61:99:0,135,1963	0/0:27,0:27:78.25:0,78,1163	0/0:28,0:28:75.15:0,75,1023	0/0:48,0:48:99:0,111,1581	1/1:12,13:25:8.25:274,8,0	0/0:45,0:45:88.49:0,88,1786	0/0:32,0:32:96.31:0,96,1406	0/0:7,0:7:14.98:0,15,199
chr10	41605847	.	C	CAG	2246.60	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=8.975;DP=878;FS=4.566;HRun=0;HaplotypeScore=171.0765;InbreedingCoeff=0.3967;MQ=52.19;MQ0=44;MQRankSum=4.000;QD=12.01;ReadPosRankSum=3.763;VQSLOD=3.4837;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,40:43:42.29:816,42,0	0/0:9,0:9:26.27:0,26,324	0/0:48,0:11:30.07:0,30,384	0/0:41,0:13:33.52:0,34,338	0/0:34,0:33:56.72:0,57,504	0/0:18,0:18:54.12:0,54,751	0/0:27,0:21:28.83:0,29,617	0/0:35,0:28:81.01:0,81,986	0/0:43,0:43:99:0,126,1728	0/1:28,0:26:89.42:307,0,89	0/1:17,0:16:9.92:10,0,53	0/0:38,0:38:87.18:0,87,1076	0/0:28,0:28:54.91:0,55,951	0/0:39,0:38:29.40:0,29,225	0/1:29,0:28:22.35:244,0,22	1/1:8,29:37:32.97:746,33,0	0/0:25,0:23:66.01:0,66,836	0/1:11,0:11:4.07:175,0,4	0/0:15,0:8:24.04:0,24,304	0/0:37,0:36:90.27:0,90,1303	0/0:72,0:70:99:0,122,1760	0/0:28,0:28:81.21:0,81,1135	0/0:23,0:20:53.37:0,53,671	0/0:49,0:49:99:0,102,1254	0/1:18,0:19:56.03:100,0,56	0/0:43,0:43:99:0,102,1634	0/0:33,0:32:89.37:0,89,1191	0/0:6,0:6:18.01:0,18,231
chr10	41605853	.	G	GAC	1948.13	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=-0.474;DP=881;FS=13.445;HRun=0;HaplotypeScore=180.3525;InbreedingCoeff=0.7544;MQ=51.52;MQ0=52;MQRankSum=2.055;QD=19.88;ReadPosRankSum=0.059;VQSLOD=2.9410;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:43:59.85:0,60,494	0/0:8,0:8:21.06:0,21,300	0/0:44,0:8:19.61:0,20,239	0/0:43,0:10:9.98:0,10,219	1/1:13,20:32:71.44:1188,71,0	0/0:19,0:19:54.17:0,54,796	0/0:29,0:23:55.41:0,55,783	0/0:39,0:32:93.22:0,93,1277	0/0:41,0:41:99:0,123,1828	0/0:28,0:26:34.14:0,34,396	0/0:17,0:16:13.27:0,13,151	0/0:40,0:40:53.09:0,53,506	0/0:34,0:34:87.05:0,87,1282	1/1:17,21:37:48.93:880,49,0	0/1:27,0:26:2.33:2,0,144	0/0:32,0:32:45.30:0,45,437	0/0:26,0:24:66.22:0,66,981	0/0:11,0:11:3.54:0,4,81	0/0:21,0:12:33.11:0,33,497	0/0:33,0:32:81.28:0,81,1237	0/0:73,0:71:99:0,110,1667	0/0:25,0:25:69.19:0,69,990	0/0:23,0:19:27.40:0,27,276	0/0:49,0:49:65.22:0,65,581	0/0:17,0:16:16.42:0,16,115	0/0:44,0:44:99:0,120,1781	0/0:34,0:33:87.26:0,87,1279	0/0:7,0:7:15.05:0,15,216
chr10	41605871	.	C	CAGAGACAG	514.04	PASS	AC=4;AF=0.077;AN=52;BaseQRankSum=3.600;DP=810;FS=4.145;HRun=0;HaplotypeScore=258.0444;InbreedingCoeff=0.8804;MQ=49.46;MQ0=63;MQRankSum=-2.372;QD=8.43;ReadPosRankSum=-3.444;VQSLOD=1.3781;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:37:47.85:0,48,983	0/0:9,0:9:12.04:0,12,299	./.	./.	1/1:24,1:24:8.79:92,9,0	0/0:18,0:18:38.99:0,39,643	0/0:30,0:24:42.14:0,42,1003	0/0:42,0:36:59.26:0,59,1120	0/0:40,0:40:78.25:0,78,1875	0/0:21,0:18:27.09:0,27,668	0/0:10,0:9:12.04:0,12,306	0/0:41,0:41:72.24:0,72,1694	0/0:30,0:30:60.19:0,60,1439	1/1:31,5:36:26.95:535,27,0	0/0:22,0:21:30.09:0,30,631	0/0:29,0:29:39.12:0,39,928	0/0:30,0:28:66.04:0,66,1377	0/0:10,0:10:12.04:0,12,267	0/0:22,0:14:18.06:0,18,456	0/0:34,0:32:36.12:0,36,816	0/0:64,0:62:66.98:0,67,1528	0/0:29,0:28:32.91:0,33,753	0/0:22,0:18:11.96:0,12,283	0/0:41,0:41:44.72:0,45,1083	0/0:16,0:15:14.94:0,15,370	0/0:34,0:32:63.17:0,63,1482	0/0:31,0:30:42.13:0,42,943	0/0:7,0:7:12.04:0,12,261
chr10	41605917	.	GACACACACACAC	G	2764.46	PASS	AB=0.841;AC=14;AF=0.250;AN=56;BaseQRankSum=-0.660;DP=661;FS=8.834;HRun=0;HaplotypeScore=290.4706;InbreedingCoeff=0.5304;MQ=52.91;MQ0=13;MQRankSum=-3.788;QD=14.78;ReadPosRankSum=-1.050;VQSLOD=0.6676;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:28:30.07:0,30,1029	0/0:8,0:10:21.07:0,21,942	0/0:25,0:15:3:0,3,94	0/0:36,0:18:3.37:0,3,9	0/0:7,0:14:11.12:0,11,98	0/0:13,0:16:30.99:0,31,1135	0/0:18,0:26:33.11:0,33,1221	0/1:18,10:24:39.15:372,0,39	0/0:14,0:36:27.09:0,27,1211	0/0:9,0:9:6:0,6,66	0/0:11,0:11:3.01:0,3,33	0/0:21,0:31:56.89:0,57,623	0/0:17,0:37:54.19:0,54,2099	0/0:20,0:32:38.25:0,38,405	0/1:10,0:9:0:0,0,0	0/0:28,0:37:54.11:0,54,1862	0/0:16,0:31:60.14:0,60,1392	0/0:5,0:4:3.48:0,3,118	1/1:11,7:18:20.20:228,20,0	1/1:5,25:30:6:164,6,0	1/1:29,2:30:12.02:293,12,0	0/0:12,0:40:24.58:0,25,679	0/0:4,0:16:5.67:0,6,63	0/0:23,0:27:5.65:0,6,53	0/1:10,0:9:0:0,0,0	0/1:11,16:26:67.95:965,0,68	1/1:6,20:26:23.97:796,24,0	1/1:3,4:7:3.01:105,3,0
chr10	41606011	.	TATAC	T	1393.29	PASS	AB=1.000;AC=14;AF=0.250;AN=56;BaseQRankSum=10.452;DP=722;FS=42.741;HRun=0;HaplotypeScore=207.8314;InbreedingCoeff=0.6017;MQ=54.64;MQ0=11;MQRankSum=-6.034;QD=7.57;ReadPosRankSum=-0.131;VQSLOD=1.5926;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:56.99:0,57,879	0/0:12,0:12:35.98:0,36,669	0/0:36,0:16:47.52:0,48,554	0/0:44,0:29:79.90:0,80,1268	0/0:23,0:22:53.89:0,54,959	0/0:20,0:20:56.92:0,57,1149	0/0:24,0:24:66.18:0,66,1322	0/0:43,0:39:58.34:0,58,890	0/0:35,0:35:99:0,99,2236	1/1:2,12:13:33.11:522,33,0	1/1:1,4:5:11.38:104,11,0	0/0:30,0:30:54.11:0,54,1008	0/0:24,0:24:69.15:0,69,1499	0/0:30,0:30:66.04:0,66,1017	1/1:1,12:12:34.41:467,34,0	0/0:24,0:24:69.16:0,69,1258	0/0:27,0:27:48.10:0,48,1332	1/1:1,3:6:12.51:178,13,0	0/0:32,0:30:52.96:0,53,475	0/1:28,0:28:57.44:57,0,185	0/1:65,0:63:15.73:16,0,677	0/0:27,0:26:66.15:0,66,1408	0/0:23,0:23:45.11:0,45,814	0/0:26,0:26:38.94:0,39,577	1/1:0,7:6:15.15:192,15,0	0/0:28,0:28:11.47:0,11,492	0/1:24,0:24:26.95:27,0,82	0/1:22,0:19:13.93:14,0,79
chr10	41606013	.	T	TACAG	5464.35	PASS	AB=1.000;AC=16;AF=0.286;AN=56;BaseQRankSum=-0.041;DP=724;FS=5.838;HRun=0;HaplotypeScore=199.8052;InbreedingCoeff=0.8129;MQ=54.78;MQ0=10;MQRankSum=-4.832;QD=21.51;ReadPosRankSum=-1.662;VQSLOD=3.9370;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:33,0:33:36.08:766,36,0	0/0:12,0:12:21.05:0,21,317	0/1:35,0:17:9.66:13,0,10	0/0:45,0:32:20.24:0,20,389	1/1:12,13:24:35.93:820,36,0	0/0:21,0:21:35.94:0,36,576	0/0:23,0:23:54.02:0,54,676	0/0:44,0:41:47.38:0,47,378	0/0:33,0:33:72.20:0,72,1119	0/0:12,0:11:32.75:0,33,281	0/0:5,0:5:2.94:0,3,19	1/1:29,1:31:39.13:769,39,0	0/0:24,0:24:51.16:0,51,793	1/1:14,17:31:36.12:875,36,0	0/0:13,0:12:27.14:0,27,182	1/1:24,0:24:54.10:1142,54,0	0/1:27,0:27:7.44:7,0,60	0/0:6,0:6:14.96:0,15,123	0/0:32,0:30:45.05:0,45,465	0/0:26,0:26:54.05:0,54,550	0/0:67,0:64:80.18:0,80,824	0/0:25,0:25:46.90:0,47,668	1/1:22,0:22:33.11:637,33,0	1/1:24,2:26:20.99:435,21,0	0/0:7,0:6:11.79:0,12,79	0/0:29,0:29:71.33:0,71,701	0/0:24,0:24:45.06:0,45,481	0/0:22,0:19:26.42:0,26,265
chr10	41606023	.	CAGACAG	C	1981.01	PASS	AB=0.700;AC=9;AF=0.161;AN=56;BaseQRankSum=8.791;DP=749;FS=49.084;HRun=0;HaplotypeScore=228.9297;InbreedingCoeff=0.8608;MQ=57.77;MQ0=15;MQRankSum=-7.491;QD=35.38;ReadPosRankSum=0.238;VQSLOD=1.6282;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:60.19:0,60,1551	0/0:13,0:13:36.08:0,36,994	0/0:30,0:16:46.26:0,46,840	0/0:47,0:38:98.25:0,98,2280	0/0:22,0:22:49.41:0,49,1364	0/0:20,0:20:54.15:0,54,1618	0/0:22,0:22:66.23:0,66,2028	0/0:50,0:47:99:0,132,2236	0/0:36,0:36:99:0,108,3408	1/1:5,12:16:28.16:747,28,0	1/1:1,4:5:15.05:242,15,0	0/0:27,0:28:45.15:0,45,1358	0/0:27,0:27:75.24:0,75,2238	0/0:25,0:25:54.12:0,54,1364	1/1:4,12:15:36.12:657,36,0	0/0:27,0:27:66.21:0,66,1805	0/0:26,0:25:63.22:0,63,1996	0/1:4,3:6:29.80:189,0,30	0/0:33,0:29:81.17:0,81,1193	0/0:31,0:31:66.12:0,66,889	0/0:68,0:65:99:0,116,1742	0/0:24,0:24:69.24:0,69,2183	0/0:25,0:25:48.07:0,48,1147	0/0:28,0:27:32.95:0,33,742	1/1:5,6:10:18.06:310,18,0	0/0:30,0:30:87.22:0,87,1438	0/0:23,0:23:51.12:0,51,639	0/0:25,0:23:39.10:0,39,566
chr10	41606027	.	CAG	C	1213.74	PASS	AB=0.875;AC=9;AF=0.161;AN=56;BaseQRankSum=8.441;DP=757;FS=53.777;HRun=0;HaplotypeScore=190.9433;InbreedingCoeff=0.8659;MQ=57.12;MQ0=16;MQRankSum=-7.739;QD=20.57;ReadPosRankSum=-0.604;VQSLOD=1.9318;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:54.18:0,54,772	0/0:11,0:11:27.09:0,27,506	0/0:31,0:17:44.99:0,45,600	0/0:43,0:34:90.12:0,90,1395	0/0:28,0:28:64.43:0,64,864	0/0:18,0:18:48.15:0,48,877	0/0:22,0:22:66.21:0,66,1177	0/0:50,0:47:99:0,113,1384	0/0:38,0:38:99:0,114,2051	1/1:20,0:19:37:519,37,0	1/1:4,1:5:15.04:193,15,0	0/0:29,0:29:42.14:0,42,666	0/0:25,0:25:69.24:0,69,1248	0/0:25,0:25:48.15:0,48,634	1/1:12,4:15:36.08:388,36,0	0/0:26,0:26:60.19:0,60,830	0/0:25,0:24:57.18:0,57,1037	0/1:6,1:6:14.11:80,0,14	0/0:35,0:31:80.46:0,80,853	0/0:32,0:32:63.09:0,63,495	0/0:64,0:61:96.31:0,96,997	0/0:23,0:23:69.24:0,69,1276	0/0:23,0:23:41.87:0,42,641	0/0:29,0:27:29.56:0,30,391	1/1:6,4:10:18.04:198,18,0	0/0:36,0:36:85.36:0,85,943	0/0:25,0:25:49.43:0,49,366	0/0:28,0:26:38.12:0,38,353
chr10	41606031	.	CAG	C	1312.75	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=6.577;DP=759;FS=28.627;HRun=0;HaplotypeScore=188.5185;InbreedingCoeff=0.8725;MQ=56.79;MQ0=16;MQRankSum=-5.883;QD=19.59;ReadPosRankSum=-1.338;VQSLOD=2.1086;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:51.12:0,51,613	0/0:10,0:10:27.07:0,27,464	0/0:29,0:15:20.94:0,21,330	0/0:41,0:32:51.80:0,52,938	0/0:27,0:27:58.40:0,58,708	0/0:19,0:19:39.18:0,39,803	0/0:21,0:21:34.28:0,34,791	0/0:44,0:41:80.36:0,80,820	0/0:38,0:38:99:0,108,1700	1/1:17,7:23:38.89:547,39,0	1/1:5,0:5:15.04:183,15,0	0/0:30,0:30:38.47:0,38,267	0/0:24,0:24:57.25:0,57,1102	0/0:26,0:26:48.12:0,48,558	1/1:18,0:17:38.60:411,39,0	0/0:27,0:27:66.14:0,66,745	0/0:24,1:24:51.19:0,51,469	0/1:7,0:6:10.12:89,0,10	0/0:31,0:27:71.28:0,71,557	0/0:31,0:31:43.62:0,44,198	0/0:63,0:60:77.19:0,77,434	0/0:29,0:29:81.08:0,81,1200	0/0:24,0:24:37.93:0,38,235	0/0:28,0:26:28.92:0,29,207	1/1:13,0:12:24.02:246,24,0	0/0:39,0:39:96.56:0,97,730	0/0:25,0:25:39.92:0,40,164	0/0:29,0:27:19.38:0,19,188
chr10	41606033	.	GACAC	G	6200.14	PASS	AB=1.000;AC=20;AF=0.357;AN=56;BaseQRankSum=1.123;DP=766;FS=9.311;HRun=0;HaplotypeScore=193.2584;InbreedingCoeff=0.5047;MQ=56.06;MQ0=16;MQRankSum=-0.067;QD=16.10;ReadPosRankSum=0.733;VQSLOD=3.6011;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:33:42.90:43,0,306	0/0:10,0:10:24.07:0,24,550	0/0:28,0:15:16.15:0,16,176	0/0:42,0:33:63:0,63,905	0/0:27,0:27:58.90:0,59,901	0/0:17,0:19:44.48:0,44,955	0/0:20,0:22:44.71:0,45,855	1/1:12,30:39:87:975,87,0	0/0:38,0:38:93.17:0,93,1878	0/1:24,0:23:35.59:36,0,208	0/0:6,0:6:1.60:0,2,50	0/0:1,0:32:39.13:0,39,680	0/0:23,0:24:62.89:0,63,1280	0/0:26,0:26:42.11:0,42,756	0/1:18,0:17:41.56:74,0,42	0/1:29,0:29:71.82:72,0,404	0/0:7,0:25:51.11:0,51,826	0/1:7,0:6:22.17:22,0,44	1/1:6,25:27:50.55:840,51,0	1/1:2,30:32:48.16:817,48,0	1/1:26,36:59:59.95:1022,60,0	0/0:27,0:27:72.09:0,72,1325	0/0:1,0:25:36.05:0,36,587	0/0:7,0:26:26.96:0,27,412	0/1:14,0:13:20.66:21,0,83	1/1:9,31:40:87.11:1136,87,0	1/1:4,21:25:42.13:716,42,0	1/1:7,21:26:27.51:428,28,0
chr10	41606035	.	C	CAG	2799.22	PASS	AB=0.966;AC=17;AF=0.304;AN=56;BaseQRankSum=8.308;DP=754;FS=2.737;HRun=0;HaplotypeScore=185.4122;InbreedingCoeff=0.2027;MQ=54.99;MQ0=16;MQRankSum=-5.843;QD=8.94;ReadPosRankSum=5.062;VQSLOD=3.3524;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:23,10:33:59.68:351,0,60	0/0:10,0:10:24.08:0,24,365	0/1:28,0:13:27.87:28,0,214	0/0:39,0:31:59.01:0,59,931	0/1:26,1:27:99:266,0,250	0/0:19,0:19:14.38:0,14,641	0/0:22,0:22:62.51:0,63,716	0/0:42,0:39:99:0,102,595	0/0:35,0:35:95.79:0,96,1381	0/1:24,0:23:20.63:21,0,221	0/1:6,0:6:8.12:76,0,8	1/1:32,0:32:39.08:406,39,0	0/0:24,0:24:65.80:0,66,942	0/1:24,1:25:46.39:252,0,46	0/1:19,0:18:29.60:74,0,30	1/1:13,15:29:0.97:585,1,0	0/1:26,0:25:72.04:305,0,72	0/0:8,0:7:19.93:0,20,146	0/0:31,0:27:68.63:0,69,418	0/0:32,0:32:53.41:0,53,363	0/0:60,0:57:80.04:0,80,559	0/0:27,0:27:77.03:0,77,1062	1/1:25,0:25:35.12:356,35,0	1/1:25,0:23:25.10:219,25,0	0/1:14,0:13:38.13:38,0,38	0/0:40,0:40:99:0,110,709	0/0:24,0:24:44.37:0,44,288	0/0:28,0:26:32.59:0,33,216
chr10	41606037	.	C	CAG	1663.57	PASS	AB=0.918;AC=13;AF=0.232;AN=56;BaseQRankSum=7.823;DP=751;FS=1.844;HRun=0;HaplotypeScore=188.1929;InbreedingCoeff=0.2764;MQ=54.95;MQ0=16;MQRankSum=-7.366;QD=7.11;ReadPosRankSum=2.328;VQSLOD=3.2393;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:23,10:33:67.81:348,0,68	0/0:9,0:9:24.08:0,24,367	0/0:27,0:12:7.90:0,8,235	0/0:39,0:31:59.74:0,60,958	0/0:29,0:29:47.89:0,48,453	0/0:21,0:21:50.88:0,51,703	0/0:21,0:21:59.96:0,60,709	0/0:42,0:39:33.53:0,34,554	0/0:34,0:34:95.80:0,96,1397	0/1:24,0:23:13.41:13,0,247	0/1:8,0:8:49.04:69,0,49	1/1:32,0:32:27.57:181,28,0	0/0:23,0:23:66.17:0,66,960	0/0:24,0:24:20.32:0,20,143	0/1:19,0:18:50.70:72,0,51	0/1:14,15:29:37.20:541,0,37	0/1:26,0:25:73.68:306,0,74	0/0:8,0:7:20.22:0,20,153	0/0:30,0:26:70.01:0,70,407	0/0:32,0:32:52.43:0,52,303	0/0:60,0:57:78.81:0,79,485	0/0:27,0:27:81.10:0,81,1101	1/1:25,0:25:13.19:172,13,0	1/1:24,0:22:11.98:96,12,0	0/1:14,0:13:35.51:36,0,40	0/0:39,0:39:26:0,26,533	0/0:24,0:24:43.59:0,44,240	0/0:28,0:26:32.20:0,32,197
chr10	41606386	.	TCCCTCTTTCC	T	148.69	PASS	AB=1.000;AC=6;AF=0.111;AN=54;BaseQRankSum=2.943;DP=381;FS=49.876;HRun=0;HaplotypeScore=118.3676;InbreedingCoeff=0.0996;MQ=43.61;MQ0=37;MQRankSum=-4.501;QD=2.75;ReadPosRankSum=-1.814;VQSLOD=0.2065;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:24:34.86:0,35,820	0/0:7,0:7:18.06:0,18,584	0/0:23,0:6:13.29:0,13,144	0/0:49,0:10:13.92:0,14,198	./.	0/0:19,0:18:33.20:0,33,1026	0/0:15,0:13:8.28:0,8,763	0/0:24,0:13:31.36:0,31,792	0/0:8,0:8:24.08:0,24,832	0/1:12,0:11:27.78:28,0,717	0/0:9,0:9:7.79:0,8,100	0/0:5,0:4:12.04:0,12,373	0/0:4,0:4:7.58:0,8,192	0/0:2,0:5:0:0,0,0	0/0:11,0:10:17.29:0,17,395	0/0:13,0:12:25.19:0,25,782	0/1:9,0:9:78.72:85,0,79	1/1:5,0:3:3.01:30,3,0	0/0:15,0:5:11.59:0,12,226	0/0:16,0:15:10.41:0,10,305	0/0:13,0:13:15.94:0,16,495	0/0:7,0:7:18.06:0,18,543	0/0:9,0:9:11.26:0,11,240	0/0:5,0:6:3.01:0,3,132	0/0:9,0:9:16.84:0,17,398	0/1:19,0:14:52.98:53,0,572	0/0:24,0:21:1.74:0,2,1066	0/1:9,0:8:68.96:69,0,369
chr10	41606392	.	TTTCC	T	231.90	PASS	AB=0.897;AC=8;AF=0.154;AN=52;BaseQRankSum=4.179;DP=368;FS=44.763;HRun=0;HaplotypeScore=99.2154;InbreedingCoeff=-0.0283;MQ=45.92;MQ0=33;MQRankSum=-3.181;QD=2.86;ReadPosRankSum=-2.256;VQSLOD=-0.1088;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,1:23:39.88:0,40,957	0/0:6,0:6:18.06:0,18,423	0/0:29,0:10:17.07:0,17,256	0/0:58,1:15:8.29:0,8,217	./.	0/0:16,0:16:33.20:0,33,856	0/1:14,0:12:26.28:26,0,720	0/0:23,0:13:33.11:0,33,887	0/0:8,0:8:24.08:0,24,627	0/1:10,1:11:47.96:48,0,542	0/0:11,0:11:10.80:0,11,143	0/0:5,0:4:12.04:0,12,272	0/0:4,0:4:6.91:0,7,167	./.	0/0:9,1:9:17.05:0,17,411	0/0:11,1:11:24.08:0,24,585	0/1:7,2:9:85.31:88,0,85	1/1:1,3:3:3.01:39,3,0	0/0:14,0:6:4.76:0,5,248	0/0:11,5:15:8.28:0,8,283	0/0:10,0:10:16.29:0,16,372	0/0:7,0:7:18.06:0,18,512	0/0:7,0:7:12.04:0,12,227	0/0:3,0:3:3.01:0,3,87	0/0:7,2:9:16.95:0,17,408	0/1:13,1:10:29.82:30,0,432	0/1:19,2:19:14.76:15,0,1059	0/1:6,2:7:99:114,0,237
chr10	41606415	.	CCT	C	1441.65	PASS	AB=0.779;AC=13;AF=0.250;AN=52;BaseQRankSum=3.733;DP=480;FS=45.008;HRun=0;HaplotypeScore=129.2449;InbreedingCoeff=-0.1454;MQ=59.56;MQ0=19;MQRankSum=-3.781;QD=5.32;ReadPosRankSum=-3.530;VQSLOD=0.7247;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:16,4:19:42.14:0,42,755	0/0:8,0:8:24.04:0,24,417	0/0:67,2:25:46.93:0,47,686	0/1:111,0:34:2.45:2,0,490	./.	0/0:14,0:14:36.10:0,36,696	0/0:16,0:16:45.11:0,45,842	0/1:23,18:35:99:596,0,741	0/0:8,0:8:24.08:0,24,484	0/1:8,3:11:99:172,0,272	0/0:12,0:12:9.46:0,9,115	0/0:4,0:4:12.03:0,12,158	0/0:5,0:5:15.05:0,15,304	./.	0/0:10,1:10:21.90:0,22,352	0/1:10,4:14:4.10:4,0,476	0/1:4,5:9:48.80:104,0,49	1/1:4,0:3:9.01:96,9,0	0/1:9,0:7:58.15:58,0,220	0/1:5,9:14:55.08:55,0,129	0/0:7,2:9:12.88:0,13,221	0/0:8,0:8:24.08:0,24,449	0/0:7,0:7:15:0,15,187	0/0:2,0:2:3.01:0,3,61	0/1:10,6:16:99:126,0,354	0/1:7,6:13:99:263,0,158	0/1:16,4:18:36.62:37,0,655	0/1:7,2:9:74.42:74,0,223
chr10	41606417	.	T	TTCTGTCTCTC	8236.51	PASS	AB=0.996;AC=32;AF=0.667;AN=48;BaseQRankSum=2.172;DP=493;FS=5.579;HRun=0;HaplotypeScore=149.1272;InbreedingCoeff=0.7202;MQ=60.08;MQ0=18;MQRankSum=-5.736;QD=24.59;ReadPosRankSum=-1.090;VQSLOD=3.9443;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:20:30.42:504,30,0	0/0:8,0:8:24.07:0,24,623	0/0:73,0:25:21.85:0,22,362	0/1:114,0:35:6.35:6,0,277	./.	0/0:15,0:15:33.03:0,33,774	0/0:15,0:15:30.95:0,31,739	1/1:42,0:36:69.17:1404,69,0	0/0:9,0:9:21.07:0,21,575	1/1:12,0:12:33.09:936,33,0	1/1:1,9:12:3.01:71,3,0	./.	0/0:5,0:5:14.95:0,15,321	./.	1/1:11,0:10:21.07:394,21,0	1/1:15,0:15:24.07:490,24,0	1/1:9,0:9:15.05:418,15,0	1/1:4,0:3:6:83,6,0	1/1:8,0:7:12.04:521,12,0	1/1:16,0:16:30.10:506,30,0	1/1:9,0:9:4.37:51,4,0	0/0:9,0:9:18.06:0,18,523	./.	1/1:2,0:2:3.01:46,3,0	1/1:16,0:16:33.10:509,33,0	1/1:12,0:12:24.84:790,25,0	1/1:20,0:17:39.13:1096,39,0	0/1:11,0:10:16.83:410,0,17
chr10	41606434	.	TTG	T	2388.43	PASS	AB=0.834;AC=21;AF=0.438;AN=48;BaseQRankSum=5.712;DP=514;FS=5.735;HRun=0;HaplotypeScore=135.1492;InbreedingCoeff=0.0956;MQ=57.36;MQ0=26;MQRankSum=-5.712;QD=10.66;ReadPosRankSum=-2.624;VQSLOD=2.3156;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,11:16:30.03:341,30,0	0/0:8,0:8:18.52:0,19,383	0/0:87,0:20:35.46:0,35,387	0/0:120,3:30:4.51:0,5,254	./.	0/0:16,0:16:41.84:0,42,725	0/0:14,0:14:19.16:0,19,697	0/1:39,9:45:99:192,0,1663	0/0:7,0:7:21.07:0,21,391	0/1:8,4:12:99:183,0,286	0/1:13,0:13:21.16:21,0,148	./.	0/0:4,0:4:9.03:0,9,182	./.	1/1:6,6:11:21.06:257,21,0	1/1:11,4:15:21.03:224,21,0	0/1:8,1:9:66.53:80,0,67	0/0:2,0:2:6.02:0,6,121	0/1:6,4:9:99:145,0,176	0/1:15,3:18:29.57:241,0,30	1/1:7,1:8:5.51:31,6,0	0/0:11,0:11:30:0,30,538	./.	1/1:0,1:1:2.99:23,3,0	0/1:12,5:17:99:189,0,151	0/1:13,2:15:44.11:44,0,425	1/1:7,11:16:0.66:393,1,0	0/1:8,3:10:73.65:188,0,74
chr10	41606475	.	GTCTCTCTCTC	G	1522.79	PASS	AB=0.881;AC=16;AF=0.348;AN=46;BaseQRankSum=3.716;DP=314;FS=9.828;HRun=0;HaplotypeScore=154.2774;InbreedingCoeff=0.5135;MQ=38.20;MQ0=9;MQRankSum=-3.234;QD=11.80;ReadPosRankSum=1.460;VQSLOD=2.2120;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:11:2.04:0,2,6	0/0:6,0:6:14.98:0,15,409	./.	./.	./.	0/0:13,0:12:24.01:0,24,864	0/0:13,0:12:12.93:0,13,385	1/1:22,0:20:13.30:248,13,0	0/0:5,0:5:3.01:0,3,125	0/0:21,0:19:45.11:0,45,968	0/0:19,0:19:3.01:0,3,65	./.	0/0:5,0:5:8.86:0,9,213	0/0:1,0:1:0.89:0,1,2	0/0:12,0:11:2.68:0,3,11	1/1:13,0:14:5.62:50,6,0	1/1:8,0:11:2.84:39,3,0	0/0:5,0:4:9.03:0,9,231	1/1:7,0:7:8.83:201,9,0	1/1:19,1:20:6:96,6,0	0/1:10,3:12:8.53:30,0,9	0/0:7,0:7:15.05:0,15,574	0/0:1,0:1:3:0,3,29	./.	0/0:19,0:19:9.03:0,9,376	0/1:18,1:19:99:434,0,103	1/1:11,1:10:9.03:211,9,0	1/1:9,2:11:15.05:369,15,0
chr10	41606487	.	CTCTCTCTCTCTATATATATATATATATATATA	C	5765.92	PASS	AB=0.895;AC=20;AF=0.455;AN=44;BaseQRankSum=4.444;DP=251;FS=8.908;HRun=0;HaplotypeScore=173.5259;InbreedingCoeff=0.3856;MQ=39.51;MQ0=7;MQRankSum=-5.034;QD=38.96;ReadPosRankSum=3.533;VQSLOD=3.0617;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:5,0:5:14.98:0,15,425	./.	./.	./.	0/0:12,0:11:24.55:0,25,1213	0/0:7,0:6:11.77:0,12,393	1/1:14,0:12:17.92:285,18,0	0/0:2,0:2:3.01:0,3,125	0/1:18,0:16:99:1025,0,613	0/0:14,0:14:3.01:0,3,135	./.	0/0:4,0:4:9.03:0,9,236	0/0:1,0:1:0.47:0,0,1	1/1:11,0:10:3.01:81,3,0	1/1:13,0:13:5.59:174,6,0	1/1:12,0:12:2.93:38,3,0	0/1:5,0:4:44.16:44,0,255	1/1:1,6:7:11.75:226,12,0	1/1:5,16:21:6.02:449,6,0	0/1:11,0:11:4.81:145,0,5	0/0:6,0:6:15.05:0,15,574	0/0:1,0:1:2.97:0,3,20	./.	0/0:16,0:16:9.03:0,9,446	0/1:5,13:18:99:1685,0,100	1/1:2,7:8:9.03:564,9,0	1/1:2,6:9:15.05:1051,15,0
chr10	41606491	.	CTCTCTCTATATATATATATATATATA	C	4193.99	PASS	AB=1.000;AC=21;AF=0.500;AN=42;BaseQRankSum=6.460;DP=229;FS=5.799;HRun=0;HaplotypeScore=138.5822;InbreedingCoeff=0.2472;MQ=40.78;MQ0=6;MQRankSum=-5.591;QD=32.51;ReadPosRankSum=5.704;VQSLOD=1.7345;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:4,0:4:11.93:0,12,261	./.	./.	./.	0/0:12,0:11:24.54:0,25,790	0/0:7,0:6:11.53:0,12,262	0/1:7,0:7:37.50:44,0,37	0/0:2,0:2:3.01:0,3,75	0/1:17,0:15:99:798,0,382	0/0:14,0:14:3.01:0,3,57	./.	0/1:3,0:3:6.73:7,0,90	0/0:1,0:1:0.47:0,0,1	1/1:10,0:9:3.01:111,3,0	1/1:2,10:12:5.58:389,6,0	1/1:11,0:11:2.71:39,3,0	0/1:6,0:5:55.12:55,0,112	1/1:6,0:6:5.80:103,6,0	1/1:17,0:17:6.02:302,6,0	1/1:8,0:8:2.40:91,2,0	0/0:6,0:6:15.04:0,15,325	./.	./.	0/0:17,0:17:9.03:0,9,267	0/1:15,0:15:50.80:1134,0,51	1/1:8,0:8:9.03:379,9,0	1/1:9,0:9:15.05:742,15,0
chr10	41606497	.	CTATATATATATATATATA	C	3809.20	PASS	AB=1.000;AC=23;AF=0.885;AN=26;BaseQRankSum=2.096;DP=219;FS=3.106;HRun=0;HaplotypeScore=116.4918;InbreedingCoeff=0.3067;MQ=41.04;MQ0=6;MQRankSum=-1.954;QD=32.01;ReadPosRankSum=0.604;VQSLOD=2.7158;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	./.	0/0:10,0:11:6.02:0,6,164	./.	./.	./.	1/1:6,0:15:31.35:1102,31,0	1/1:12,0:12:3.01:51,3,0	./.	1/1:1,0:2:2.88:15,3,0	./.	1/1:2,6:8:3.01:134,3,0	1/1:11,0:11:5.77:217,6,0	./.	1/1:4,2:5:3.01:147,3,0	0/1:6,0:6:0:0,0,0	1/1:17,0:17:6.02:277,6,0	1/1:6,1:7:3.01:107,3,0	./.	./.	./.	./.	1/1:15,0:15:21.07:955,21,0	1/1:8,0:8:6.02:264,6,0	1/1:9,0:9:12.04:539,12,0
chr10	41607265	.	AT	A	1258.40	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=7.656;DP=551;FS=4.913;HRun=9;HaplotypeScore=62.7167;InbreedingCoeff=0.9197;MQ=72.85;MQ0=0;MQRankSum=-1.449;QD=22.47;ReadPosRankSum=1.237;VQSLOD=4.6617;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:54.16:0,54,623	0/0:8,0:8:18.05:0,18,208	0/0:15,0:14:29.39:0,29,335	0/0:10,1:11:3.44:0,3,177	0/0:27,1:29:47.59:0,48,783	0/0:27,0:27:75.21:0,75,855	0/0:20,0:20:57.17:0,57,658	0/0:33,0:33:78.23:0,78,900	0/0:14,1:16:14.47:0,14,391	0/0:28,1:29:47.75:0,48,804	0/0:23,0:23:66.18:0,66,752	1/1:0,11:11:33.02:302,33,0	0/0:16,0:16:48.13:0,48,542	0/0:22,0:22:60.17:0,60,683	0/0:23,0:23:66.20:0,66,762	0/0:15,0:15:39.11:0,39,442	0/0:17,0:17:36.11:0,36,415	0/0:8,0:8:15.04:0,15,173	0/0:12,0:14:38.92:0,39,410	0/0:32,0:32:93.27:0,93,1065	0/0:9,0:10:29.92:0,30,326	0/0:29,0:30:75.05:0,75,837	1/1:3,29:32:81.04:742,81,0	1/1:0,13:13:39.02:357,39,0	0/0:15,1:16:14.66:0,15,423	0/0:23,0:23:60.18:0,60,690	0/0:31,0:31:84.18:0,84,941	0/0:8,0:8:15.04:0,15,173
chr10	41608206	.	G	GTTT	2270.19	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-4.805;DP=442;FS=0.000;HRun=10;HaplotypeScore=61.2675;InbreedingCoeff=0.9707;MQ=68.86;MQ0=0;MQRankSum=-0.562;QD=34.93;ReadPosRankSum=0.027;VQSLOD=2.8424;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:42.11:0,42,496	0/0:12,0:12:27.04:0,27,328	0/0:12,0:10:16.23:0,16,280	0/0:10,0:10:8.30:0,8,137	0/0:22,0:22:51.12:0,51,620	0/0:20,0:20:51.14:0,51,620	0/0:10,0:10:27.08:0,27,328	0/0:38,0:38:90.18:0,90,1094	0/0:15,0:15:42.08:0,42,494	1/1:7,11:18:36.12:645,36,0	1/1:2,6:11:25.57:371,26,0	0/0:11,0:11:30.08:0,30,365	0/0:22,0:22:51.13:0,51,620	0/0:14,0:14:39.08:0,39,454	1/1:2,7:9:18.06:346,18,0	0/0:19,0:19:57.17:0,57,693	0/0:12,0:12:30.06:0,30,365	1/1:1,13:14:30.10:575,30,0	0/0:22,0:23:60.10:0,60,711	0/0:13,0:14:31.49:0,31,387	0/0:11,0:11:33.10:0,33,401	0/0:9,0:9:24.06:0,24,292	0/0:10,0:11:27.01:0,27,308	0/0:15,0:15:39.08:0,39,474	1/1:1,10:13:30.06:507,30,0	0/0:25,0:25:66.17:0,66,802	0/0:28,0:27:69.08:0,69,839	0/0:6,0:6:12.04:0,12,146
chr10	41608388	.	AT	A	1624.55	PASS	AC=10;AF=0.185;AN=54;BaseQRankSum=8.965;DP=333;FS=3.705;HRun=7;HaplotypeScore=34.1613;InbreedingCoeff=0.8961;MQ=63.40;MQ0=0;MQRankSum=-0.731;QD=25.38;ReadPosRankSum=0.260;VQSLOD=3.6026;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:45.14:0,45,566	0/0:3,0:3:6.02:0,6,75	0/0:10,0:10:3.33:0,3,218	./.	0/0:11,0:11:33.11:0,33,415	0/0:13,0:13:33.10:0,33,404	0/0:6,0:6:18.06:0,18,226	0/0:40,0:40:99:0,105,1289	0/0:13,0:13:36.10:0,36,438	1/1:0,14:14:42.10:429,42,0	1/1:0,16:16:42.09:428,42,0	0/0:5,0:5:15.05:0,15,186	0/0:13,0:13:36.10:0,36,439	0/0:5,0:5:12.04:0,12,151	1/1:4,7:11:27.04:267,27,0	0/0:13,0:13:39.12:0,39,490	0/0:18,0:18:51.16:0,51,641	1/1:3,9:12:33.07:336,33,0	0/0:11,0:11:33.11:0,33,415	0/0:14,0:14:42.13:0,42,528	0/0:11,0:11:30.10:0,30,377	0/0:2,0:2:6.02:0,6,75	0/0:10,0:10:30.10:0,30,377	0/0:5,1:6:12.04:0,12,151	1/1:1,10:11:33.07:336,33,0	0/0:24,1:25:32.61:0,33,724	0/0:15,0:15:45.14:0,45,566	0/0:7,0:7:18.05:0,18,226
chr10	41610284	.	C	CT	14362.96	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-12.647;DP=651;FS=7.663;HRun=6;HaplotypeScore=57.9179;InbreedingCoeff=0.9992;MQ=66.68;MQ0=2;MQRankSum=0.270;QD=30.11;ReadPosRankSum=3.660;VQSLOD=5.4186;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,49:53:99:1660,132,0	0/0:8,0:8:21.04:0,21,214	0/0:25,0:25:54.10:0,54,544	0/0:21,0:21:42.39:0,42,406	1/1:3,21:24:63.20:788,63,0	0/0:27,0:27:75.10:0,75,752	0/0:31,0:31:81.17:0,81,820	1/1:8,22:21:39.09:453,39,0	0/0:22,0:22:60.13:0,60,611	1/1:0,23:23:60.15:742,60,0	1/1:2,16:18:45.14:566,45,0	1/1:2,22:24:57.18:717,57,0	0/0:22,0:22:57.13:0,57,581	1/1:3,23:26:57.18:717,57,0	1/1:0,21:21:63.20:792,63,0	1/1:0,18:18:48.15:604,48,0	1/1:2,17:19:51.16:642,51,0	1/1:0,21:21:60.19:755,60,0	1/1:2,21:24:60.14:710,60,0	1/1:1,18:19:45.10:546,45,0	1/1:4,22:26:57.18:717,57,0	0/0:18,0:18:45.10:0,45,458	1/1:2,17:18:36.09:438,36,0	1/1:1,25:26:72.23:906,72,0	1/1:1,18:19:39.12:491,39,0	1/1:2,27:29:75.20:913,75,0	1/1:1,26:26:66.21:830,66,0	1/1:1,10:11:30.10:377,30,0
chr10	41610484	.	AACAGGTCTG	A	8388.93	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=14.528;DP=679;FS=9.669;HRun=0;HaplotypeScore=178.9167;InbreedingCoeff=0.9899;MQ=56.96;MQ0=18;MQRankSum=-13.461;QD=72.95;ReadPosRankSum=1.679;VQSLOD=4.4149;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:58:99:0,175,7999	0/0:7,0:7:21.07:0,21,1042	0/0:29,0:16:39.58:0,40,1425	0/0:25,0:10:21.07:0,21,762	0/0:28,0:28:81.28:0,81,3931	0/0:11,0:11:30.10:0,30,1214	0/0:29,0:29:87.25:0,87,3621	0/0:36,0:35:99:0,102,4527	0/0:27,0:27:78.27:0,78,3819	1/1:0,30:29:84.25:2492,84,0	1/1:0,23:23:39.09:1157,39,0	0/0:22,0:22:66.23:0,66,3119	0/0:11,0:11:33.11:0,33,1485	0/0:21,0:21:63.20:0,63,2803	1/1:0,21:21:57.20:1801,57,0	0/0:19,0:19:54.19:0,54,2626	0/0:28,0:27:75.26:0,75,3435	1/1:1,13:14:21.07:664,21,0	0/0:20,0:18:48.16:0,48,2029	0/0:33,0:33:95.96:0,96,4252	0/0:32,0:32:96.33:0,96,4391	0/0:19,0:19:57.18:0,57,2704	0/0:27,0:27:81.28:0,81,3669	0/0:22,0:22:66.23:0,66,3189	1/1:0,27:27:72.25:2275,72,0	0/0:30,0:30:87.30:0,87,4104	0/0:26,0:25:78.27:0,78,3686	0/0:4,0:4:12.04:0,12,596
chr10	41611123	.	G	GGT	778.99	PASS	AB=0.880;AC=20;AF=0.370;AN=54;BaseQRankSum=4.667;DP=472;FS=24.219;HRun=0;HaplotypeScore=198.6777;InbreedingCoeff=-0.1314;MQ=30.97;MQ0=6;MQRankSum=-2.178;QD=2.57;ReadPosRankSum=3.206;VQSLOD=0.9393;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:3,2:5:2.94:18,3,0	0/1:8,1:9:10.61:11,0,84	./.	0/0:5,0:1:3.01:0,3,35	1/1:15,9:24:0.42:1,0,0	0/1:18,6:23:10.68:70,0,11	0/0:15,0:15:5.82:0,6,86	0/1:17,0:16:6.83:7,0,82	0/0:17,1:17:9.42:0,9,106	0/1:27,8:35:99:357,0,697	1/1:17,0:17:2.74:17,3,0	0/1:14,2:16:13.33:13,0,75	1/1:10,1:11:2.11:31,2,0	0/0:16,0:16:1.50:0,1,5	0/0:13,2:15:2.12:0,2,10	0/1:9,0:9:0.54:23,0,1	0/0:10,0:10:3.93:0,4,13	0/0:12,0:11:15.86:0,16,231	0/0:12,0:10:24.51:0,25,229	0/1:25,7:31:54.07:54,0,64	0/0:10,0:9:7.84:0,8,89	0/0:27,14:41:13.62:0,14,95	0/1:22,8:28:21.01:21,0,87	0/0:14,0:14:2.22:0,2,7	0/1:15,2:17:12.28:12,0,63	0/1:18,5:21:99:176,0,319	0/1:24,5:30:79.31:79,0,358	0/1:4,0:3:9.91:31,0,10
chr10	41611125	.	G	GGT	107.38	PASS	AB=0.960;AC=13;AF=0.241;AN=54;BaseQRankSum=6.286;DP=436;FS=11.629;HRun=0;HaplotypeScore=189.7421;InbreedingCoeff=0.0993;MQ=30.83;MQ0=6;MQRankSum=-3.062;QD=0.66;ReadPosRankSum=0.861;VQSLOD=1.9617;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:5:1.82:0,2,5	0/0:9,0:9:6.92:0,7,63	./.	0/0:2,0:1:3.01:0,3,35	1/1:22,0:22:0.47:1,0,0	0/0:22,1:22:8.25:0,8,27	0/0:15,0:15:5.96:0,6,86	0/1:16,0:15:2.92:3,0,65	0/0:17,0:16:10.29:0,10,91	0/1:35,0:35:89.98:90,0,512	1/1:15,0:15:1.17:2,1,0	0/0:14,0:14:1.30:0,1,5	1/1:9,0:9:2.68:13,3,0	0/0:14,0:14:1.25:0,1,3	1/1:14,0:14:0.50:1,0,0	0/0:7,0:7:2.97:0,3,8	0/0:10,0:10:2.37:0,2,9	0/0:12,0:11:13.86:0,14,161	0/0:10,0:8:14.71:0,15,141	0/0:28,2:30:0.75:0,1,66	0/0:10,0:9:5.99:0,6,80	0/0:36,0:36:13.06:0,13,114	0/0:29,0:27:6.93:0,7,98	0/0:13,0:13:2.22:0,2,7	0/0:16,0:16:3.75:0,4,27	0/1:21,0:19:84.77:85,0,284	0/1:27,0:27:7.32:7,0,326	0/1:3,1:3:10.01:14,0,10
chr10	41612726	.	C	CT	12341.13	PASS	AC=52;AF=0.963;AN=54;BaseQRankSum=-1.266;DP=372;FS=3.405;HRun=1;HaplotypeScore=180.6042;InbreedingCoeff=0.7306;MQ=33.46;MQ0=0;MQRankSum=-1.732;QD=33.90;ReadPosRankSum=1.277;VQSLOD=4.4859;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,20:24:66.21:870,66,0	1/1:0,11:11:33.06:437,33,0	./.	0/0:2,2:3:3.01:0,3,43	1/1:2,16:18:32.59:385,33,0	1/1:1,11:12:33.11:461,33,0	1/1:1,6:7:21.03:258,21,0	1/1:6,21:27:69.20:971,69,0	1/1:3,12:15:42.12:543,42,0	1/1:3,14:17:48.09:669,48,0	1/1:0,12:12:27.08:331,27,0	1/1:0,10:10:30.05:380,30,0	1/1:2,7:9:21.07:303,21,0	1/1:0,15:15:45.14:612,45,0	1/1:2,14:16:42.13:574,42,0	1/1:0,10:10:30.09:400,30,0	1/1:2,9:11:24.07:292,24,0	1/1:2,3:5:11.98:133,12,0	1/1:3,19:19:51.62:736,52,0	1/1:3,23:26:66.67:832,67,0	1/1:0,5:5:15.05:192,15,0	1/1:3,19:22:57.16:688,57,0	1/1:3,6:9:21.05:248,21,0	1/1:0,15:15:24.29:345,24,0	1/1:1,9:10:30.09:395,30,0	1/1:2,10:12:33.07:468,33,0	1/1:5,12:17:36.12:506,36,0	1/1:0,7:7:21.07:311,21,0
chr10	41613417	.	TGG	T	4228.75	PASS	AB=0.742;AC=28;AF=0.500;AN=56;BaseQRankSum=-2.834;DP=589;FS=1.638;HRun=5;HaplotypeScore=88.9400;InbreedingCoeff=0.7516;MQ=68.34;MQ0=4;MQRankSum=1.426;QD=13.91;ReadPosRankSum=1.269;VQSLOD=1.0606;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:22:2.20:166,2,0	0/0:8,0:8:15:0,15,133	0/0:33,0:22:41.09:0,41,449	0/0:33,0:22:39.74:0,40,430	0/0:19,0:19:53.72:0,54,486	0/0:25,0:25:22.07:0,22,460	0/0:29,0:29:32.40:0,32,497	1/1:15,0:15:39.04:363,39,0	0/0:25,0:25:42.51:0,43,445	1/1:4,26:30:77.82:685,78,0	1/1:16,0:16:38.92:317,39,0	0/0:18,0:17:42.82:0,43,415	0/0:24,0:24:38.21:0,38,439	0/0:21,0:21:33.90:0,34,294	1/1:3,31:34:0.27:158,0,0	1/1:22,0:23:6.61:259,7,0	0/1:2,18:20:19.28:33,0,19	1/1:6,11:17:5.69:53,6,0	1/1:3,16:19:34.68:398,35,0	1/1:18,0:18:38.57:322,39,0	1/1:22,0:22:13.16:357,13,0	0/0:20,0:20:50.04:0,50,428	0/0:16,0:16:35.20:0,35,363	0/0:14,0:12:18.90:0,19,195	1/1:15,0:15:38.80:314,39,0	1/1:22,0:22:24.17:409,24,0	0/1:22,1:23:48.78:250,0,49	1/1:8,0:8:8.35:145,8,0
chr10	41613421	.	GGA	G	368.50	PASS	AB=0.948;AC=19;AF=0.365;AN=52;BaseQRankSum=2.162;DP=617;FS=42.724;HRun=0;HaplotypeScore=106.2497;InbreedingCoeff=0.2976;MQ=64.02;MQ0=7;MQRankSum=-0.742;QD=1.40;ReadPosRankSum=2.267;VQSLOD=0.1655;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:3.01:0,3,39	1/1:7,0:8:3.73:16,4,0	./.	./.	0/0:25,0:23:6.01:0,6,64	1/1:23,3:27:8.85:77,9,0	1/1:22,6:28:11.92:129,12,0	0/0:22,0:22:6.84:0,7,44	1/1:20,3:25:5.85:46,6,0	0/1:29,0:29:26.31:26,0,30	1/1:14,0:14:2.84:14,3,0	0/0:18,0:18:20.96:0,21,184	0/1:15,6:23:19.73:77,0,20	0/0:18,0:25:8.86:0,9,65	0/1:38,0:38:61.20:84,0,61	0/0:25,0:27:24.48:0,24,223	0/1:23,0:23:8.38:8,0,70	1/1:15,0:15:2.90:16,3,0	0/1:18,0:18:11.60:12,0,38	0/0:17,0:17:5.90:0,6,42	0/0:24,0:24:15.03:0,15,174	0/0:25,0:25:2.98:0,3,24	0/0:15,0:15:12.01:0,12,118	0/0:16,0:15:8.81:0,9,96	1/1:15,0:15:2.98:22,3,0	0/0:23,0:22:12.92:0,13,142	0/0:25,0:25:13.08:0,13,292	0/0:8,0:8:3.01:0,3,39
chr10	41613904	.	GCTT	G	329.41	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.797;DP=651;FS=0.000;HRun=0;HaplotypeScore=89.4947;InbreedingCoeff=0.9934;MQ=77.88;MQ0=0;MQRankSum=-4.795;QD=41.18;ReadPosRankSum=0.022;VQSLOD=4.6889;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:99:0,99,2380	0/0:10,0:10:30.10:0,30,716	0/0:19,0:19:51.18:0,51,1214	0/0:13,0:13:39.13:0,39,840	0/0:34,0:34:99:0,102,2470	0/0:30,0:30:87.28:0,87,2091	0/0:17,0:17:51.18:0,51,1259	0/0:44,0:44:99:0,129,3069	0/0:24,0:24:72.25:0,72,1773	0/0:30,0:30:90.31:0,90,2229	0/0:20,0:20:60.21:0,60,1456	0/0:23,0:23:69.22:0,69,1630	0/0:25,0:25:75.26:0,75,1849	0/0:25,0:25:75.26:0,75,1847	0/0:24,0:24:72.25:0,72,1777	0/0:24,0:24:72.25:0,72,1754	1/1:0,8:8:24.08:423,24,0	0/0:7,0:7:21.07:0,21,501	0/0:17,0:17:51.17:0,51,1210	0/0:39,0:39:99:0,117,2784	0/0:28,0:28:84.29:0,84,2036	0/0:24,0:24:72.25:0,72,1753	0/0:24,0:24:68.75:0,69,1669	0/0:19,0:19:57.20:0,57,1405	0/0:24,0:23:72.25:0,72,1775	0/0:22,0:22:66.23:0,66,1608	0/0:26,0:26:78.25:0,78,1875	0/0:18,0:18:51.15:0,51,1205
chr10	41614216	.	C	CT	3034.68	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=-9.767;DP=592;FS=8.506;HRun=8;HaplotypeScore=68.5330;InbreedingCoeff=0.8717;MQ=67.61;MQ0=2;MQRankSum=2.046;QD=22.15;ReadPosRankSum=-0.902;VQSLOD=3.5082;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:69.49:0,69,632	0/0:8,0:8:21.01:0,21,192	0/0:20,0:12:8.14:0,8,122	0/1:23,0:17:16.82:17,0,110	0/0:27,1:28:31.38:0,31,531	0/0:16,0:16:39.02:0,39,357	0/0:17,0:17:36.01:0,36,329	0/0:27,0:27:78.03:0,78,711	0/0:20,0:20:54.02:0,54,494	1/1:4,29:33:87.26:1003,87,0	1/1:2,18:20:23.60:497,24,0	0/0:7,0:7:18.01:0,18,165	0/0:23,0:23:63.03:0,63,576	0/0:20,0:20:51.01:0,51,467	1/1:3,21:24:51.15:589,51,0	0/0:17,0:17:48.02:0,48,439	0/0:26,0:26:68.98:0,69,623	1/1:1,10:10:27.08:312,27,0	0/0:19,0:19:45.02:0,45,410	0/0:32,0:32:84.02:0,84,764	0/0:17,0:17:45.02:0,45,412	0/0:18,0:18:48.02:0,48,439	0/0:12,0:12:30.01:0,30,275	0/0:20,0:20:54.02:0,54,494	1/1:1,23:24:69.21:796,69,0	0/0:24,0:24:69.04:0,69,631	0/0:35,0:34:93:0,93,843	0/0:20,0:20:48.02:0,48,439
chr10	41621242	.	T	TA	1725.85	PASS	AB=0.759;AC=14;AF=0.259;AN=54;BaseQRankSum=3.677;DP=262;FS=5.992;HRun=9;HaplotypeScore=38.6421;InbreedingCoeff=0.6726;MQ=71.73;MQ0=14;MQRankSum=-7.604;QD=17.79;ReadPosRankSum=-2.060;VQSLOD=2.6665;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:10:26.99:0,27,234	0/0:2,0:2:5.99:0,6,49	0/1:17,0:11:10.57:11,0,48	0/0:16,0:10:2.52:0,3,25	0/0:11,0:11:32.98:0,33,284	0/0:13,0:13:38.99:0,39,338	0/0:7,0:7:11.98:0,12,104	1/1:7,12:19:45.10:481,45,0	0/0:7,0:6:17.98:0,18,153	0/0:13,0:12:35.99:0,36,310	0/0:17,0:14:38.99:0,39,338	0/0:4,0:4:11.95:0,12,97	0/0:5,0:5:15:0,15,130	0/0:5,0:5:9:0,9,78	0/0:7,0:4:12:0,12,104	0/0:9,0:9:23.92:0,24,200	0/0:10,0:10:23.98:0,24,208	0/0:14,0:14:41.96:0,42,358	1/1:6,11:17:41.97:417,42,0	1/1:3,6:7:18.05:199,18,0	0/1:1,3:4:13.96:88,0,14	./.	0/0:7,0:7:21:0,21,182	0/0:3,0:3:6:0,6,52	0/0:4,0:4:9:0,9,78	1/1:3,9:12:7.03:290,7,0	1/1:4,8:12:7:285,7,0	1/1:1,5:5:12.03:133,12,0
chr10	41621256	.	G	GA	2509.28	PASS	AB=0.787;AC=26;AF=0.481;AN=54;BaseQRankSum=2.719;DP=287;FS=14.232;HRun=10;HaplotypeScore=45.2237;InbreedingCoeff=0.6458;MQ=79.07;MQ0=7;MQRankSum=-1.749;QD=16.40;ReadPosRankSum=-1.011;VQSLOD=2.1713;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:26.96:0,27,221	0/0:2,0:2:5.99:0,6,49	0/0:26,0:18:4.59:0,5,121	0/1:18,0:10:5:5,0,19	1/1:2,11:14:32.95:334,33,0	0/0:14,0:14:26.96:0,27,222	0/0:3,0:3:8.99:0,9,74	1/1:7,9:16:27.07:288,27,0	0/0:9,0:9:26.95:0,27,218	0/0:13,0:13:32.95:0,33,271	0/0:16,0:16:38.94:0,39,320	0/1:2,3:5:12.57:84,0,13	0/0:6,0:6:14.98:0,15,123	1/1:1,3:4:6.02:64,6,0	0/0:6,0:4:11.98:0,12,98	0/0:9,0:9:23.97:0,24,197	1/1:3,0:12:28.57:148,29,0	0/0:18,0:18:32.91:0,33,271	1/1:5,11:17:17.30:370,17,0	1/1:1,6:6:18.05:192,18,0	0/1:3,3:6:34.25:81,0,34	./.	1/1:2,5:8:17.88:174,18,0	1/1:0,5:5:12.03:128,12,0	0/1:5,1:6:16.55:17,0,80	1/1:4,12:17:41.94:427,42,0	1/1:2,8:12:32.73:305,33,0	1/1:2,3:5:9.02:95,9,0
chr10	41622431	.	GT	G	93.61	PASS	AB=0.571;AC=3;AF=0.150;AN=20;BaseQRankSum=3.993;DP=177;FS=15.423;HRun=5;HaplotypeScore=42.3537;InbreedingCoeff=0.5229;MQ=56.56;MQ0=5;MQRankSum=-4.015;QD=6.24;ReadPosRankSum=0.770;VQSLOD=-0.5119;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,11:11:15:156,15,0	0/0:8,0:8:24.08:0,24,328	0/0:16,0:4:5.98:0,6,53	0/0:15,0:8:12.04:0,12,142	./.	0/0:20,0:20:42.14:0,42,574	0/0:22,0:22:63.20:0,63,846	./.	0/0:26,0:26:78.26:0,78,1059	./.	./.	./.	0/0:21,0:21:63.15:0,63,824	./.	./.	0/1:1,3:3:27.95:28,0,35	./.	./.	./.	./.	./.	0/0:29,0:29:87.23:0,87,1121	./.	./.	./.	./.	./.	./.
chr10	41622514	.	T	TTG	231.84	PASS	AB=1.000;AC=10;AF=0.294;AN=34;BaseQRankSum=2.895;DP=273;FS=14.091;HRun=0;HaplotypeScore=40.9999;InbreedingCoeff=0.4848;MQ=50.91;MQ0=18;MQRankSum=0.244;QD=8.28;ReadPosRankSum=-4.628;VQSLOD=0.6844;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:29:45.11:0,45,703	0/0:13,0:13:36.12:0,36,587	0/0:23,0:8:21.07:0,21,337	0/0:24,0:14:32.75:0,33,470	./.	0/0:13,0:13:36.12:0,36,587	0/0:17,0:17:51.16:0,51,790	0/0:12,0:8:1.12:0,1,241	0/0:32,0:32:93.29:0,93,1458	0/1:7,0:4:36.41:36,0,43	1/1:3,4:5:5.97:108,6,0	./.	0/0:20,0:19:57.19:0,57,923	./.	./.	0/0:15,0:9:15.05:0,15,244	./.	./.	./.	1/1:1,0:3:6.02:104,6,0	0/1:7,0:7:12.88:13,0,134	0/0:23,0:22:66.23:0,66,1073	./.	./.	1/1:3,0:2:3.01:42,3,0	./.	1/1:0,0:1:3.01:51,3,0	./.
chr10	41622916	.	C	CA	1921.61	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=6.904;DP=629;FS=10.309;HRun=1;HaplotypeScore=119.0483;InbreedingCoeff=0.9879;MQ=74.17;MQ0=3;MQRankSum=-1.885;QD=36.26;ReadPosRankSum=2.436;VQSLOD=2.5027;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:38:57.19:0,57,739	0/0:8,0:8:24.08:0,24,312	0/0:40,0:28:83.87:0,84,996	0/0:27,0:19:42.43:0,42,609	0/0:16,0:16:39.11:0,39,490	0/0:24,0:24:69.22:0,69,895	0/0:32,0:32:96.30:0,96,1230	0/0:32,0:32:90.28:0,90,1143	0/0:36,0:36:99:0,102,1308	0/0:29,0:29:84.24:0,84,1036	0/0:17,1:17:45.15:0,45,584	1/1:0,21:20:60.20:898,60,0	0/0:19,0:19:57.17:0,57,726	0/0:23,0:20:39.12:0,39,493	0/0:25,0:23:54.18:0,54,700	0/0:18,0:17:48.16:0,48,622	0/0:29,0:29:60.17:0,60,760	0/0:12,1:12:30.07:0,30,357	0/0:18,0:17:36.55:0,37,450	0/0:21,0:20:57.12:0,57,717	0/0:20,0:18:45.15:0,45,582	0/0:19,0:19:57.19:0,57,740	1/1:0,13:12:32.90:494,33,0	1/1:0,19:18:45.15:673,45,0	0/0:17,0:17:33.11:0,33,428	0/0:18,0:18:45.12:0,45,565	0/0:23,0:19:45.15:0,45,583	0/0:6,0:6:12.04:0,12,156
chr10	41623353	.	AAG	A	2649.66	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=13.199;DP=606;FS=3.975;HRun=0;HaplotypeScore=89.4443;InbreedingCoeff=0.8609;MQ=60.10;MQ0=4;MQRankSum=-0.810;QD=19.92;ReadPosRankSum=2.024;VQSLOD=3.4067;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,21:27:63.20:815,63,0	0/0:5,0:5:15.05:0,15,247	0/0:37,0:25:52.98:0,53,795	0/0:41,1:26:12.69:0,13,506	1/1:3,22:25:57.15:711,57,0	0/0:21,0:21:57.20:0,57,967	0/0:23,0:23:63.22:0,63,1061	0/1:38,0:29:1.93:2,0,951	0/0:14,0:14:39.13:0,39,663	0/0:29,0:28:81.27:0,81,1354	0/0:18,0:18:42.14:0,42,714	0/0:15,0:15:39.13:0,39,662	0/0:19,0:19:48.16:0,48,816	1/1:7,19:26:66.16:817,66,0	0/0:14,0:14:21.06:0,21,331	1/1:3,13:16:36.12:465,36,0	0/0:10,0:10:27.09:0,27,459	0/0:31,0:28:18.92:0,19,962	0/0:19,0:17:26.41:0,26,729	0/0:26,0:26:69.23:0,69,1149	0/0:15,0:14:2.93:0,3,432	0/0:23,0:23:54.17:0,54,892	0/0:22,0:22:66.23:0,66,1114	0/0:27,0:24:53.68:0,54,915	0/0:23,0:23:60.19:0,60,994	0/0:16,0:16:33.97:0,34,656	0/0:14,0:13:33.11:0,33,557	0/0:10,0:9:27.09:0,27,442
chr10	41623483	.	A	AT	418.65	PASS	AB=0.933;AC=8;AF=0.154;AN=52;BaseQRankSum=-0.301;DP=367;FS=16.634;HRun=0;HaplotypeScore=97.9964;InbreedingCoeff=-0.0220;MQ=36.46;MQ0=22;MQRankSum=3.091;QD=3.91;ReadPosRankSum=-2.484;VQSLOD=1.6295;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:12:4.64:0,5,80	0/1:3,0:2:0.08:0,0,0	./.	./.	0/0:16,0:14:3.01:0,3,39	0/1:21,2:21:99:207,0,137	0/1:9,4:10:11.02:97,0,11	0/0:18,0:15:36.54:0,37,423	0/0:1,0:1:3.01:0,3,42	0/0:22,0:18:48.02:0,48,611	0/0:17,0:17:6.88:0,7,53	0/0:4,0:3:8.39:0,8,91	0/0:10,0:10:23.66:0,24,287	0/0:10,0:9:5.64:0,6,74	0/0:13,0:12:15.40:0,15,172	0/0:16,0:14:12.02:0,12,146	0/0:19,0:17:27.06:0,27,351	0/0:17,0:13:28.03:0,28,339	0/1:17,0:14:11.70:12,0,413	0/1:12,0:11:0.06:0,0,0	0/1:9,4:12:4.54:8,0,5	0/0:4,0:3:9.03:0,9,122	0/0:8,0:6:6.49:0,6,84	0/0:16,0:11:12.04:0,12,166	0/0:13,0:13:3:0,3,27	0/0:26,0:23:15.47:0,15,776	0/1:11,0:8:58.16:173,0,58	0/1:14,0:12:36.06:36,0,177
chr10	41624647	.	GCTT	G	6617.94	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=6.525;DP=646;FS=5.340;HRun=0;HaplotypeScore=112.1875;InbreedingCoeff=0.9944;MQ=67.17;MQ0=2;MQRankSum=-4.286;QD=40.35;ReadPosRankSum=1.142;VQSLOD=6.1334;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,105,2243	0/0:15,0:15:42.14:0,42,902	0/0:33,0:25:60.58:0,61,1203	0/0:30,0:29:75.12:0,75,1485	0/0:20,0:20:57.20:0,57,1226	0/0:21,0:21:60.19:0,60,1270	0/0:27,0:27:69.24:0,69,1483	1/1:4,25:29:78.18:1109,78,0	0/0:19,0:19:51.18:0,51,1115	0/0:25,0:25:72.24:0,72,1499	0/0:25,0:25:72.25:0,72,1570	0/0:18,0:18:54.18:0,54,852	0/0:25,0:25:72.22:0,72,1488	0/0:14,0:14:39.13:0,39,853	0/0:26,0:26:72.25:0,72,1558	0/0:18,0:18:54.19:0,54,1180	0/0:15,0:15:39.13:0,39,853	0/0:4,0:4:12.04:0,12,254	1/1:4,22:25:66.18:1010,66,0	1/1:4,24:28:66.16:1015,66,0	1/1:0,31:31:84.15:1273,84,0	0/0:39,0:39:99:0,114,2463	0/0:24,0:24:69.23:0,69,1098	0/0:18,0:18:51.17:0,51,807	0/0:25,0:25:75.26:0,75,1619	1/1:0,19:19:57.18:880,57,0	1/1:1,17:18:48.16:760,48,0	1/1:0,13:13:36.12:570,36,0
chr10	41624764	.	TCA	T	2102.81	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.478;DP=667;FS=6.166;HRun=0;HaplotypeScore=85.7449;InbreedingCoeff=0.9996;MQ=88.43;MQ0=0;MQRankSum=-0.740;QD=34.47;ReadPosRankSum=2.048;VQSLOD=5.7550;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:37:99:0,114,2135	0/0:13,0:13:33.11:0,33,617	0/0:24,0:24:66.23:0,66,1233	0/0:29,0:29:87.30:0,87,1571	0/0:20,0:20:54.18:0,54,994	0/0:26,0:26:78.25:0,78,1413	0/0:11,0:11:33.11:0,33,618	0/0:27,0:27:78.25:0,78,1370	0/0:32,0:32:93.32:0,93,1735	0/0:39,0:39:99:0,117,2162	0/0:21,0:21:57.20:0,57,1066	1/1:1,16:17:42.14:619,42,0	0/0:25,0:25:72.25:0,72,1348	0/0:19,0:19:57.18:0,57,1036	0/0:26,0:26:78.25:0,78,1408	0/0:20,0:20:54.18:0,54,981	0/0:14,0:14:42.14:0,42,771	0/0:11,0:11:30.10:0,30,550	0/0:24,0:24:72.25:0,72,1346	0/0:30,0:30:81.28:0,81,1515	0/0:34,0:34:99:0,99,1838	0/0:34,0:34:96.33:0,96,1788	1/1:0,24:24:54.18:788,54,0	1/1:1,19:20:57.19:840,57,0	0/0:20,0:20:57.20:0,57,1066	0/0:27,0:27:78.25:0,78,1404	0/0:27,0:27:81.28:0,81,1506	0/0:15,0:15:45.15:0,45,842
chr10	41625793	.	AAG	A	1771.90	PASS	AB=1.000;AC=18;AF=0.346;AN=52;BaseQRankSum=-2.207;DP=455;FS=0.594;HRun=0;HaplotypeScore=89.7950;InbreedingCoeff=0.5436;MQ=39.62;MQ0=27;MQRankSum=3.906;QD=9.90;ReadPosRankSum=2.782;VQSLOD=2.8542;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:11:0.47:0,0,1	0/0:13,0:12:21.25:0,21,289	0/0:16,0:1:2.84:0,3,14	0/0:23,2:9:15.71:0,16,106	0/1:28,0:26:0:0,0,0	0/0:23,0:23:41.87:0,42,584	0/0:26,0:23:12.95:0,13,394	1/1:11,12:20:10.04:256,10,0	0/0:17,0:16:30.46:0,30,417	0/0:23,0:22:4.20:0,4,23	./.	0/1:11,0:11:0:0,0,0	0/0:16,0:16:45.09:0,45,600	0/1:14,0:14:0:0,0,0	1/1:10,0:9:0.46:1,0,0	1/1:6,0:5:3.43:21,3,0	0/0:16,0:15:10.40:0,10,69	./.	1/1:6,15:18:32.11:425,32,0	1/1:24,0:24:49.47:511,49,0	0/1:17,0:15:32.82:214,0,33	0/0:26,0:26:47.99:0,48,641	0/0:9,0:8:3.84:0,4,21	0/0:9,0:9:3.08:0,3,17	0/0:19,0:19:3:0,3,25	1/1:17,0:17:1.96:333,2,0	0/0:4,9:12:2.75:0,3,17	1/1:8,0:7:17.68:162,18,0
chr10	41626414	.	AACT	A	1589.24	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.628;DP=590;FS=5.410;HRun=0;HaplotypeScore=97.5960;InbreedingCoeff=0.9962;MQ=83.53;MQ0=0;MQRankSum=-8.255;QD=37.84;ReadPosRankSum=-1.211;VQSLOD=4.1850;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:69.23:0,69,1652	0/0:8,0:8:24.08:0,24,592	0/0:19,0:19:54.18:0,54,1264	0/0:22,0:22:65.30:0,65,1421	0/0:23,0:23:69.24:0,69,1699	0/0:20,0:20:60.21:0,60,1479	0/0:15,0:15:45.15:0,45,1100	0/0:21,0:21:63.22:0,63,1508	0/0:22,0:22:66.23:0,66,1619	0/0:41,0:41:99:0,123,2935	0/0:20,0:20:60.21:0,60,1479	1/1:3,5:8:24.08:424,24,0	0/0:25,0:25:75.25:0,75,1802	0/0:21,0:21:63.22:0,63,1552	0/0:28,0:28:84.29:0,84,2046	0/0:17,0:17:51.18:0,51,1257	0/0:20,0:20:60.21:0,60,1467	0/0:7,0:7:21.07:0,21,517	0/0:12,0:12:36.12:0,36,871	0/0:23,0:23:69.22:0,69,1603	0/0:38,0:38:99:0,114,2761	0/0:18,0:18:51.17:0,51,1210	1/1:1,19:19:54.18:912,54,0	1/1:2,12:14:23.67:396,24,0	0/0:25,0:25:75.24:0,75,1727	0/0:30,0:30:90.31:0,90,2171	0/0:36,0:36:99:0,108,2591	0/0:14,0:14:42.14:0,42,1035
chr10	41626419	.	TG	T	903.18	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.468;DP=586;FS=11.798;HRun=2;HaplotypeScore=74.1610;InbreedingCoeff=0.9938;MQ=83.08;MQ0=0;MQRankSum=-8.497;QD=22.58;ReadPosRankSum=-0.259;VQSLOD=2.1836;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:69.22:0,69,1014	0/0:8,0:8:21.07:0,21,315	0/0:21,0:21:57.19:0,57,822	0/0:19,0:19:53.96:0,54,722	0/0:23,0:23:66.22:0,66,989	0/0:20,0:20:60.20:0,60,899	0/0:15,0:15:45.14:0,45,656	0/0:20,0:20:60.20:0,60,898	0/0:21,0:21:63.21:0,63,944	0/0:40,0:40:99:0,120,1799	0/0:20,0:20:60.19:0,60,874	1/1:1,6:7:21.04:227,21,0	0/0:27,0:27:81.26:0,81,1193	0/0:21,0:21:63.21:0,63,944	0/0:28,0:28:84.28:0,84,1259	0/0:19,0:19:57.18:0,57,830	0/0:21,0:21:63.16:0,63,898	0/0:7,0:7:21.07:0,21,308	0/0:15,0:15:45.14:0,45,653	0/0:23,0:23:69.23:0,69,1034	0/0:38,0:38:99:0,114,1690	0/0:16,0:16:48.03:0,48,689	1/1:1,19:19:54.14:595,54,0	1/1:1,12:13:20.04:222,20,0	0/0:23,0:23:69.22:0,69,1010	0/0:28,0:28:84.28:0,84,1256	0/0:36,0:36:99:0,102,1488	0/0:14,0:14:42.14:0,42,629
chr10	41626577	.	AT	A	3946.45	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=16.129;DP=618;FS=1.186;HRun=7;HaplotypeScore=79.5118;InbreedingCoeff=0.9844;MQ=65.72;MQ0=0;MQRankSum=-2.149;QD=25.96;ReadPosRankSum=2.367;VQSLOD=4.3230;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,37:38:99:1071,105,0	0/0:11,0:11:33.11:0,33,415	0/0:13,0:11:10.73:0,11,248	0/0:10,0:9:21.07:0,21,264	1/1:1,28:29:84.19:856,84,0	0/0:20,0:20:60.13:0,60,723	0/0:11,0:11:30.10:0,30,377	0/0:24,0:24:66.20:0,66,817	0/0:30,0:30:87.28:0,87,1095	0/0:27,0:27:75.22:0,75,920	0/0:34,0:34:93.24:0,93,1139	1/1:2,13:15:30.06:306,30,0	0/0:37,0:37:99:0,108,1332	1/1:2,24:26:66.15:673,66,0	0/0:28,0:28:81.25:0,81,999	1/1:2,10:12:30.07:306,30,0	0/0:26,0:26:69.12:0,69,807	0/0:16,0:16:48.15:0,48,604	0/0:21,0:21:57.18:0,57,717	0/0:29,0:29:81.26:0,81,1019	0/0:13,0:13:33.11:0,33,415	0/0:24,0:24:63.17:0,63,776	1/1:3,23:26:60.13:611,60,0	1/1:2,4:6:12.03:122,12,0	0/0:26,0:26:70.47:0,70,936	0/0:27,0:27:75.24:0,75,943	0/0:32,0:32:93.25:0,93,1140	0/0:7,0:7:18.04:0,18,213
chr10	41626614	.	AT	A	683.02	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=7.121;DP=596;FS=4.383;HRun=8;HaplotypeScore=87.2723;InbreedingCoeff=0.8943;MQ=62.37;MQ0=2;MQRankSum=-5.784;QD=16.66;ReadPosRankSum=0.233;VQSLOD=3.7193;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:93.26:0,93,1100	0/0:14,0:14:39.12:0,39,471	0/0:16,0:6:4.75:0,5,93	0/0:17,0:8:4.87:0,5,168	0/0:31,0:31:78.21:0,78,918	0/0:22,0:22:63.19:0,63,761	0/0:13,0:13:33.10:0,33,398	0/0:29,0:29:69.21:0,69,833	0/0:26,1:27:43.23:0,43,792	0/0:29,0:29:84.25:0,84,1006	0/0:30,0:30:87.24:0,87,1016	1/1:2,9:11:18.03:174,18,0	0/0:29,0:29:81.24:0,81,967	0/0:25,0:25:57.17:0,57,688	0/0:17,0:17:36.10:0,36,425	0/0:11,0:11:33.10:0,33,398	0/0:22,0:21:57.17:0,57,689	0/0:16,0:16:42.11:0,42,494	0/0:27,0:27:69.04:0,69,810	0/0:26,0:26:72.22:0,72,870	0/0:7,0:7:18.06:0,18,217	0/0:16,0:16:48.13:0,48,568	1/1:3,21:24:57.01:533,57,0	1/1:1,5:5:12.02:113,12,0	0/0:28,0:28:72.22:0,72,869	0/0:30,0:30:87.27:0,87,1050	0/0:30,0:29:69.21:0,69,832	0/0:10,0:10:18.05:0,18,214
chr10	41629041	.	G	GTTT	8005.40	PASS	AB=0.576;AC=37;AF=0.661;AN=56;BaseQRankSum=1.895;DP=586;FS=4.823;HRun=11;HaplotypeScore=91.8051;InbreedingCoeff=0.6249;MQ=63.64;MQ0=1;MQRankSum=-2.303;QD=18.03;ReadPosRankSum=0.283;VQSLOD=3.3654;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:22:13.86:169,14,0	0/0:15,0:16:37.66:0,38,452	0/0:27,0:17:20.90:0,21,222	0/0:24,0:14:9.05:0,9,92	1/1:6,1:27:46.22:517,46,0	0/0:22,0:22:57.10:0,57,651	0/0:13,0:14:39.02:0,39,427	1/1:12,18:34:67.53:926,68,0	0/1:3,0:12:20.62:29,0,21	1/1:11,5:39:74.52:892,75,0	1/1:20,1:32:48.88:847,49,0	1/1:3,0:14:9.97:23,10,0	0/1:3,0:14:16.80:17,0,28	1/1:4,0:17:9.03:121,9,0	0/1:3,0:18:1.17:197,0,1	1/1:1,1:19:15.05:215,15,0	0/0:14,0:17:32.99:0,33,361	0/1:6,1:14:6.14:107,0,6	1/1:5,8:13:22.30:339,22,0	1/1:11,19:33:56.90:844,57,0	1/1:6,14:20:27.01:468,27,0	0/1:3,0:18:8.54:9,0,48	0/0:20,0:21:57.06:0,57,644	1/1:1,0:14:13.47:46,13,0	1/1:9,0:15:26.05:370,26,0	1/1:5,14:25:61.31:874,61,0	1/1:12,16:31:48.08:724,48,0	1/1:2,6:10:18.02:272,18,0
chr10	41631318	.	TA	T	10795.59	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=13.473;DP=497;FS=0.815;HRun=2;HaplotypeScore=54.0815;InbreedingCoeff=0.9691;MQ=57.65;MQ0=0;MQRankSum=-0.345;QD=32.23;ReadPosRankSum=0.794;VQSLOD=4.4496;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,32:30:75.25:1049,75,0	0/0:11,0:11:30.10:0,30,480	0/0:22,0:18:47.83:0,48,715	0/0:25,0:23:66.19:0,66,1020	1/1:0,22:21:51.13:691,51,0	0/0:27,0:27:81.28:0,81,1295	0/0:19,0:19:57.19:0,57,903	1/1:0,25:25:72.24:1006,72,0	0/0:14,0:14:42.14:0,42,671	1/1:0,14:12:36.11:487,36,0	1/1:0,12:12:24.08:336,24,0	1/1:1,12:13:33.11:452,33,0	0/0:16,0:16:48.16:0,48,767	1/1:0,12:9:24.08:336,24,0	1/1:0,9:9:24.08:336,24,0	1/1:0,12:10:21.07:294,21,0	1/1:2,18:19:49.93:671,50,0	1/1:0,10:10:30.10:420,30,0	1/1:0,15:14:39.13:545,39,0	1/1:0,18:17:39.13:545,39,0	1/1:0,18:18:30.10:420,30,0	0/0:28,0:28:84.27:0,84,1314	1/1:0,13:13:33.11:458,33,0	1/1:0,15:15:39.12:528,39,0	1/1:0,23:19:39.13:546,39,0	1/1:0,27:22:63.21:879,63,0	1/1:0,24:23:54.65:756,55,0	1/1:0,1:1:3.01:42,3,0
chr10	41633457	.	TA	T	6709.56	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=5.958;DP=391;FS=19.241;HRun=9;HaplotypeScore=50.0637;InbreedingCoeff=0.9532;MQ=66.95;MQ0=0;MQRankSum=-4.753;QD=20.90;ReadPosRankSum=2.637;VQSLOD=3.5357;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,17:20:44.94:402,45,0	0/0:5,0:5:12.04:0,12,138	0/0:11,0:10:14.96:0,15,156	0/0:9,0:7:9.64:0,10,57	1/1:4,12:16:29.93:264,30,0	0/0:13,0:13:27.08:0,27,311	0/0:5,0:5:9.03:0,9,104	1/1:7,32:39:96.04:878,96,0	0/0:13,0:13:30.09:0,30,346	1/1:1,15:16:45.02:412,45,0	1/1:5,19:24:54.02:494,54,0	1/1:2,10:12:29.94:264,30,0	0/0:7,0:7:18.03:0,18,196	1/1:0,13:13:36.02:329,36,0	1/1:2,7:9:18.01:165,18,0	1/1:3,10:13:33:297,33,0	1/1:6,10:16:30.01:274,30,0	1/1:2,8:10:18.01:165,18,0	1/1:5,17:22:45.01:409,45,0	1/1:4,19:23:50.94:457,51,0	1/1:3,12:15:30.01:275,30,0	0/0:7,0:7:12.04:0,12,139	1/1:1,17:18:41.94:374,42,0	1/1:0,3:3:9:82,9,0	1/1:2,14:16:39.01:357,39,0	1/1:0,13:13:39:351,39,0	1/1:5,9:14:27:247,27,0	1/1:2,7:9:23.99:214,24,0
chr10	41633495	.	C	CT	2679.30	PASS	AB=0.726;AC=32;AF=0.593;AN=54;BaseQRankSum=-0.447;DP=249;FS=3.217;HRun=9;HaplotypeScore=67.6354;InbreedingCoeff=0.7488;MQ=72.09;MQ0=0;MQRankSum=-6.115;QD=16.14;ReadPosRankSum=-2.388;VQSLOD=3.4571;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:6,6:12:4.99:173,0,5	0/0:7,0:7:20.95:0,21,175	0/0:9,0:8:7.63:0,8,53	0/0:12,0:10:3.45:0,3,54	0/0:7,0:7:21:0,21,182	0/0:12,0:12:32.98:0,33,282	0/0:6,0:6:11.99:0,12,104	1/1:13,19:32:63.14:678,63,0	0/0:9,0:9:17.99:0,18,156	1/1:6,0:12:20.24:125,20,0	0/1:8,0:11:1.65:49,0,2	1/1:2,5:7:15.04:164,15,0	0/0:5,0:5:9:0,9,78	0/0:13,0:13:32.79:0,33,273	1/1:2,0:4:5.68:28,6,0	1/1:2,6:8:8.28:186,8,0	1/1:4,6:10:15.04:159,15,0	1/1:4,0:6:8.48:41,8,0	1/1:5,7:11:21.05:225,21,0	1/1:5,8:13:24.06:265,24,0	./.	0/0:1,0:1:3:0,3,26	1/1:1,6:7:18.05:199,18,0	1/1:1,1:2:6.02:66,6,0	1/1:2,0:9:16.87:86,17,0	1/1:6,4:11:20.87:202,21,0	1/1:3,2:5:14.81:136,15,0	1/1:1,2:4:11.65:92,12,0
chr10	41639628	.	TA	T	1291.87	PASS	AC=24;AF=0.923;AN=26;BaseQRankSum=2.250;DP=351;FS=0.000;HRun=1;HaplotypeScore=29.9671;InbreedingCoeff=0.2760;MQ=10.01;MQ0=306;MQRankSum=0.437;QD=8.67;ReadPosRankSum=1.847;VQSLOD=0.8799;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	1/1:3,3:3:6.02:80,6,0	./.	./.	./.	./.	1/1:4,3:3:9.03:125,9,0	1/1:3,5:5:8.88:98,9,0	1/1:9,2:2:6.02:81,6,0	./.	./.	1/1:11,1:1:3.01:40,3,0	./.	1/1:32,2:2:3.01:38,3,0	1/1:29,3:3:6.02:84,6,0	./.	1/1:3,3:3:9.03:122,9,0	./.	0/0:5,0:3:6.02:0,6,95	1/1:0,5:5:15.01:183,15,0	./.	1/1:1,11:11:33.11:446,33,0	1/1:4,1:1:3.01:42,3,0	1/1:10,1:1:3.01:41,3,0	./.
chr10	41639881	.	A	ACTACTCTT	529.16	PASS	AB=0.833;AC=3;AF=0.75;AN=4;BaseQRankSum=-0.694;DP=23;FS=0.000;HRun=0;HaplotypeScore=35.3075;MQ=218.77;MQ0=0;MQRankSum=-0.077;QD=31.13;ReadPosRankSum=0.540;VQSLOD=2.3771;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	1/1:5,2:7:2.70:277,3,0	0/1:8,2:10:16.54:317,0,17	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.
chr10	41640785	.	TCA	T	2490.83	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.619;DP=620;FS=1.645;HRun=0;HaplotypeScore=75.9144;InbreedingCoeff=0.9968;MQ=88.52;MQ0=1;MQRankSum=-3.013;QD=35.58;ReadPosRankSum=1.081;VQSLOD=5.5045;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,117,2179	0/0:7,0:7:21.07:0,21,377	0/0:25,0:25:75.25:0,75,1261	0/0:24,0:24:66.20:0,66,1131	0/0:27,0:27:81.28:0,81,1516	0/0:20,0:20:60.21:0,60,1123	0/0:17,0:17:51.17:0,51,947	0/0:26,0:26:75.25:0,75,1369	0/0:19,0:19:54.19:0,54,1000	0/0:40,0:40:99:0,120,2242	0/0:25,0:25:75.24:0,75,1373	1/1:0,25:25:69.23:1015,69,0	0/0:15,0:15:45.14:0,45,810	0/0:24,0:24:69.24:0,69,1282	0/0:19,0:19:57.20:0,57,1044	0/0:11,0:11:33.11:0,33,614	0/0:10,0:10:30.10:0,30,560	0/0:26,0:26:78.27:0,78,1452	0/0:8,0:8:24.08:0,24,446	0/0:27,0:27:81.28:0,81,1517	0/0:33,0:33:99:0,99,1768	0/0:24,0:24:69.24:0,69,1291	1/1:0,26:25:65.97:971,66,0	1/1:1,18:19:45.15:647,45,0	0/0:22,0:22:66.23:0,66,1236	0/0:19,0:19:57.20:0,57,1063	0/0:33,0:33:99:0,99,1793	0/0:10,0:10:24.08:0,24,444
chr10	41640909	.	CGTGTGTGT	C	2114.34	PASS	AB=0.898;AC=24;AF=0.462;AN=52;BaseQRankSum=3.701;DP=524;FS=11.391;HRun=0;HaplotypeScore=147.6679;InbreedingCoeff=0.2684;MQ=61.09;MQ0=20;MQRankSum=-6.006;QD=7.29;ReadPosRankSum=-0.040;VQSLOD=2.0653;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:26,1:27:11.67:119,12,0	0/0:11,0:11:5.99:0,6,50	./.	./.	0/1:17,1:26:10.92:11,0,18	0/1:10,0:11:38.37:47,0,38	0/0:17,0:21:27.04:0,27,438	0/0:16,0:15:8.95:0,9,82	0/0:14,0:22:32.80:0,33,533	0/1:14,2:15:10.60:81,0,11	1/1:13,0:11:0.45:1,0,0	1/1:7,0:15:9.03:168,9,0	0/0:8,0:11:9.01:0,9,146	1/1:8,0:17:16.30:278,16,0	0/1:9,5:15:3.96:313,0,4	1/1:13,5:21:20.99:419,21,0	0/0:6,0:5:1.36:0,1,3	0/1:15,0:16:5.19:85,0,5	0/1:15,0:15:21.03:55,0,21	0/1:19,0:18:50.30:50,0,141	0/0:39,0:38:20.30:0,20,148	0/0:14,0:24:20.88:0,21,282	1/1:11,0:11:3.01:56,3,0	1/1:10,0:16:3.64:58,4,0	1/1:13,10:25:17.84:502,18,0	0/1:23,0:23:41.71:42,0,138	0/0:30,0:30:24.41:0,24,358	0/0:11,0:10:6.01:0,6,74
chr10	41640953	.	TGTGTGTGC	T	2326.93	PASS	AB=0.989;AC=20;AF=0.357;AN=56;BaseQRankSum=5.608;DP=549;FS=2.166;HRun=0;HaplotypeScore=151.2975;InbreedingCoeff=-0.1437;MQ=55.20;MQ0=20;MQRankSum=-4.829;QD=7.12;ReadPosRankSum=1.194;VQSLOD=2.7393;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:32,0:31:17.29:17,0,289	0/0:5,0:5:6.02:0,6,181	0/0:29,0:11:19.32:0,19,236	0/0:23,0:9:19.31:0,19,129	0/0:19,0:19:19.68:0,20,155	0/0:17,0:17:6.43:0,6,534	0/0:19,0:19:44.90:0,45,628	1/1:14,0:14:2.14:149,2,0	0/0:21,0:21:47.92:0,48,788	0/1:16,0:15:25.82:26,0,207	0/1:18,0:18:28.33:28,0,184	0/1:17,0:16:75.91:95,0,76	0/0:9,0:9:23.20:0,23,338	0/1:20,0:20:99:160,0,153	0/1:16,0:14:87.31:217,0,87	0/1:20,0:19:99:299,0,108	0/0:21,0:21:18.26:0,18,162	0/1:16,0:13:20.57:21,0,149	1/1:3,10:11:26.98:288,27,0	0/1:20,1:21:36.74:94,0,37	1/1:44,0:41:58.91:468,59,0	0/0:27,0:27:46.65:0,47,685	0/1:14,0:13:13.46:13,0,123	0/1:18,0:18:16.80:17,0,145	0/1:26,0:24:99:355,0,117	0/1:15,1:16:24.10:234,0,24	0/0:32,0:32:24.25:0,24,184	0/1:5,0:5:16.97:17,0,19
chr10	41640955	.	TGTGTGC	T	1680.32	PASS	AB=1.000;AC=18;AF=0.321;AN=56;BaseQRankSum=6.424;DP=542;FS=6.987;HRun=0;HaplotypeScore=137.6811;InbreedingCoeff=0.3765;MQ=55.62;MQ0=17;MQRankSum=-5.537;QD=6.86;ReadPosRankSum=0.226;VQSLOD=2.2168;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:36.20:0,36,330	0/0:5,0:5:6.02:0,6,124	0/0:29,0:11:19.32:0,19,236	0/0:23,0:9:18.45:0,18,123	0/0:18,0:18:22.74:0,23,160	0/0:15,0:15:19.88:0,20,333	0/0:18,0:18:41.87:0,42,446	1/1:14,0:14:20.62:171,21,0	0/0:19,0:19:27.93:0,28,520	0/0:17,0:15:6.15:0,6,207	0/0:18,0:18:23.97:0,24,219	0/1:18,0:17:50.03:50,0,94	0/0:9,0:9:22.87:0,23,254	0/1:22,0:22:84.56:85,0,194	0/1:16,0:15:72.96:73,0,124	0/1:21,0:20:99:120,0,128	0/0:21,0:21:17.26:0,17,160	0/0:14,0:12:10.86:0,11,159	1/1:13,0:11:26.99:256,27,0	1/1:7,14:21:8.99:138,9,0	1/1:42,0:40:60.33:486,60,0	0/0:28,0:28:48.30:0,48,478	0/0:15,0:14:3.50:0,4,149	0/0:19,0:19:0.07:0,0,167	0/1:26,0:24:99:186,0,150	0/1:15,0:15:7.08:229,0,7	1/1:32,0:32:7.05:44,7,0	1/1:5,0:5:2.99:23,3,0
chr10	41640957	.	TGTGC	T	1600.25	PASS	AB=1.000;AC=20;AF=0.357;AN=56;BaseQRankSum=5.880;DP=530;FS=5.781;HRun=0;HaplotypeScore=120.9882;InbreedingCoeff=0.3575;MQ=56.00;MQ0=16;MQRankSum=-4.764;QD=5.86;ReadPosRankSum=-1.335;VQSLOD=2.1244;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:30:47.56:0,48,392	0/0:5,0:5:5.98:0,6,77	0/0:29,0:11:19.32:0,19,236	0/0:23,0:9:19.43:0,19,131	0/0:18,0:18:23.73:0,24,162	0/0:17,0:17:14.59:0,15,283	0/0:16,0:16:37.95:0,38,293	1/1:14,0:14:26.05:204,26,0	0/0:18,0:18:47.40:0,47,350	0/0:17,0:15:20.04:0,20,218	0/0:16,0:16:36.75:0,37,254	0/1:17,0:16:9.06:9,0,95	0/1:9,0:9:3.02:3,0,137	0/1:23,0:23:36.58:37,0,216	0/1:16,0:15:31.70:32,0,126	0/1:21,0:20:46.55:47,0,131	0/0:21,0:21:16.75:0,17,159	0/0:12,0:10:22.44:0,22,171	1/1:12,0:10:26.98:242,27,0	0/1:20,0:20:2.91:64,0,3	1/1:38,0:36:62.86:509,63,0	0/1:26,0:26:8.11:8,0,271	0/0:15,0:14:17.14:0,17,163	0/0:19,0:19:13.93:0,14,181	0/1:26,0:25:64.23:64,0,173	1/1:15,0:15:0.28:267,0,0	1/1:5,26:31:17.49:252,17,0	1/1:5,0:5:5.98:46,6,0
chr10	41642485	.	TATATATATATATATAGAGAGAGAGAGAGAGAGAG	T	3437.06	PASS	AC=16;AF=0.889;AN=18;BaseQRankSum=2.205;DP=49;FS=10.000;HRun=0;HaplotypeScore=89.4614;MQ=26.56;MQ0=2;MQRankSum=2.205;QD=92.89;ReadPosRankSum=1.953;VQSLOD=2.2448;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	0/0:5,0:1:1.25:0,1,3	./.	./.	./.	1/1:9,0:8:2.50:330,3,0	./.	./.	./.	./.	./.	1/1:2,0:2:3:25,3,0	1/1:2,0:2:3.01:193,3,0	./.	1/1:5,0:5:8.99:551,9,0	1/1:2,0:2:3.01:158,3,0	1/1:4,0:4:5.33:335,5,0	./.	./.	./.	./.	./.	./.	./.	1/1:1,2:3:6.02:538,6,0	1/1:7,3:10:18.06:1307,18,0
chr10	41642499	.	TAGAGAGAGAGAGAGAGAGAG	T	2748.09	PASS	AC=16;AF=0.800;AN=20;BaseQRankSum=1.915;DP=44;FS=7.404;HRun=0;HaplotypeScore=67.9104;InbreedingCoeff=0.4442;MQ=70.71;MQ0=1;MQRankSum=-1.575;QD=98.15;ReadPosRankSum=3.022;VQSLOD=2.4578;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:4,0:2:6.02:0,6,259	0/0:7,0:3:5.19:0,5,73	./.	./.	./.	1/1:4,2:5:5.93:335,6,0	./.	./.	./.	./.	./.	1/1:1,1:2:3.01:144,3,0	1/1:1,0:1:3.01:152,3,0	./.	1/1:3,2:5:9.03:453,9,0	1/1:1,0:1:3.01:152,3,0	1/1:2,2:4:5.93:335,6,0	./.	./.	./.	./.	./.	./.	./.	1/1:2,0:2:6.02:304,6,0	1/1:4,3:7:18.06:965,18,0
chr10	41642559	.	C	CT	513.27	PASS	AB=0.925;AC=19;AF=0.528;AN=36;BaseQRankSum=1.676;DP=127;FS=34.582;HRun=10;HaplotypeScore=59.8068;InbreedingCoeff=0.1851;MQ=75.09;MQ0=9;MQRankSum=-1.433;QD=4.62;ReadPosRankSum=3.374;VQSLOD=-0.3567;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/1:34,0:14:1.97:2,0,105	0/1:20,0:6:9.64:10,0,22	0/0:4,0:4:5.76:0,6,33	./.	0/0:3,0:2:5.99:0,6,49	1/1:4,7:9:18.05:192,18,0	0/0:3,0:3:5.98:0,6,49	./.	./.	0/1:1,0:1:0:0,0,0	0/1:2,0:2:0.01:0,0,0	0/0:3,0:3:2.98:0,3,22	1/1:2,1:2:3.01:32,3,0	./.	0/1:4,2:6:11.37:61,0,11	1/1:2,3:3:6.02:64,6,0	0/1:7,1:8:11.83:27,0,12	./.	./.	./.	0/0:2,0:2:5.94:0,6,43	./.	1/1:0,3:2:6.02:64,6,0	1/1:1,1:1:3.01:30,3,0	0/1:4,1:5:18.21:26,0,18	1/1:5,4:7:12.03:128,12,0
chr10	41642574	.	A	AC	996.31	PASS	AB=0.696;AC=17;AF=0.425;AN=40;BaseQRankSum=3.677;DP=116;FS=10.373;HRun=0;HaplotypeScore=28.6702;InbreedingCoeff=0.0975;MQ=66.70;MQ0=19;MQRankSum=-1.335;QD=14.87;ReadPosRankSum=2.073;VQSLOD=3.9627;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:16,0:10:26.81:0,27,238	0/1:14,0:4:1.43:18,0,1	1/1:0,3:3:9.03:132,9,0	./.	0/0:5,0:2:6.02:0,6,84	1/1:2,10:10:18.06:287,18,0	0/0:5,0:4:9.03:0,9,125	0/0:1,0:1:3.01:0,3,42	./.	0/0:1,0:1:3.01:0,3,42	0/0:5,0:3:9:0,9,106	0/1:1,2:3:35.62:42,0,36	1/1:1,1:1:3.01:48,3,0	0/0:2,0:2:6.02:0,6,84	0/1:3,4:6:68.50:128,0,68	1/1:1,3:2:6.02:95,6,0	0/0:7,0:4:9.03:0,9,126	./.	./.	./.	0/1:1,2:3:12.94:71,0,13	./.	0/1:1,3:3:28.64:86,0,29	1/1:2,1:1:3.01:48,3,0	0/1:3,1:4:38.60:39,0,75	0/1:4,4:7:99:141,0,105
chr10	41645138	.	TA	T	1451.02	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-1.338;DP=569;FS=1.233;HRun=1;HaplotypeScore=78.4574;InbreedingCoeff=0.9988;MQ=68.16;MQ0=0;MQRankSum=-0.304;QD=30.87;ReadPosRankSum=1.293;VQSLOD=3.4314;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:69.11:0,69,900	0/0:12,0:12:36.12:0,36,496	0/0:19,0:17:49.64:0,50,601	0/0:17,0:17:41.11:0,41,562	0/0:35,0:35:99:0,105,1372	0/0:18,0:18:54.11:0,54,681	0/0:13,0:13:39.12:0,39,526	0/0:30,0:30:90.28:0,90,1213	1/1:0,11:11:30.10:419,30,0	0/0:25,0:25:75.23:0,75,1005	0/0:23,0:23:69.15:0,69,922	0/0:14,0:14:39.11:0,39,527	1/1:4,10:14:36.66:495,37,0	0/0:13,0:13:39.10:0,39,509	0/0:19,0:19:57.16:0,57,760	0/0:19,0:19:29.43:0,29,708	0/0:16,0:16:48.16:0,48,663	0/0:13,0:13:33.01:0,33,395	0/0:27,0:27:81.22:0,81,1054	0/0:35,0:35:99:0,102,1388	0/0:17,0:17:51.09:0,51,638	1/1:2,20:22:49.16:680,49,0	0/0:24,0:24:72.21:0,72,971	0/0:10,0:10:30.06:0,30,382	0/0:27,0:27:78.23:0,78,1054	0/0:31,0:31:93.29:0,93,1254	0/0:33,0:33:98.92:0,99,1276	0/0:9,0:9:27.09:0,27,375
chr10	41647057	.	A	AG	5393.98	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-5.182;DP=620;FS=0.351;HRun=5;HaplotypeScore=77.7686;InbreedingCoeff=0.9995;MQ=84.29;MQ0=0;MQRankSum=-3.876;QD=33.92;ReadPosRankSum=0.486;VQSLOD=4.8898;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:93.23:0,93,997	0/0:12,0:12:36.09:0,36,387	0/0:27,0:27:65.95:0,66,669	0/0:20,0:20:54.57:0,55,568	0/0:32,0:32:90.22:0,90,967	0/0:34,0:34:99:0,102,1064	0/0:14,0:14:39.10:0,39,419	1/1:2,27:29:81.26:1066,81,0	0/0:28,0:28:84.19:0,84,893	0/0:39,0:39:99:0,108,1151	0/0:21,0:21:57.14:0,57,613	0/0:16,0:16:45.11:0,45,483	0/0:19,0:19:51.13:0,51,548	0/0:24,0:24:69.17:0,69,742	0/0:16,0:16:48.11:0,48,508	0/0:15,0:15:42.11:0,42,451	0/0:18,0:18:51.13:0,51,548	0/0:17,0:17:39.08:0,39,410	1/1:1,11:12:33.11:434,33,0	1/1:5,32:37:99:1300,99,0	1/1:2,18:20:42.14:553,42,0	0/0:26,0:26:78.18:0,78,830	0/0:18,0:18:51.13:0,51,548	0/0:15,0:15:42.11:0,42,451	0/0:17,0:17:45.11:0,45,483	1/1:4,25:29:42.99:915,43,0	1/1:1,23:24:63.18:811,63,0	1/1:0,8:8:24.08:316,24,0
chr10	41648016	.	TTC	T	782.23	PASS	AB=0.953;AC=12;AF=0.214;AN=56;BaseQRankSum=3.102;DP=551;FS=3.071;HRun=0;HaplotypeScore=203.9471;InbreedingCoeff=-0.1033;MQ=61.54;MQ0=4;MQRankSum=-2.930;QD=3.60;ReadPosRankSum=-3.389;VQSLOD=2.5758;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:16,0:16:18.13:18,0,210	0/0:8,0:8:24.07:0,24,434	0/0:36,1:19:49.95:0,50,769	0/0:47,0:29:58.60:0,59,932	0/1:38,0:38:62.55:63,0,486	0/0:8,0:8:21.07:0,21,414	0/0:12,0:12:33.06:0,33,573	0/1:18,7:25:99:435,0,561	0/0:18,0:18:54.18:0,54,1036	0/1:30,4:33:99:116,0,1052	0/1:26,0:26:1.06:1,0,392	0/0:16,0:16:33.06:0,33,397	0/0:25,0:25:75.22:0,75,1458	0/0:24,0:24:51.10:0,51,587	0/0:14,0:14:30.01:0,30,336	0/0:9,0:9:21.05:0,21,309	0/0:14,0:14:17.69:0,18,294	0/1:4,1:6:68.24:68,0,152	0/1:12,0:12:7.05:7,0,433	0/1:34,0:34:99:106,0,667	0/1:9,0:9:30.55:31,0,149	0/0:12,0:12:36.12:0,36,712	0/0:29,0:29:7.29:0,7,426	0/1:16,0:16:33.90:34,0,88	0/0:25,0:25:18.36:0,18,634	0/0:16,0:16:48.10:0,48,738	0/0:19,0:19:33.05:0,33,412	1/1:0,1:1:3.01:47,3,0
chr10	41648018	.	C	CCTCCTCCTCCATCCTT	52563.50	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-1.459;DP=606;FS=10.536;HRun=0;HaplotypeScore=225.6228;InbreedingCoeff=0.9411;MQ=60.06;MQ0=4;MQRankSum=-12.809;QD=118.92;ReadPosRankSum=4.135;VQSLOD=3.5792;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,7:21:21.55:1570,22,0	0/0:7,0:7:18.06:0,18,615	0/0:38,0:21:47.70:0,48,1189	0/0:46,0:27:48.37:0,48,1223	1/1:17,22:41:62.76:3769,63,0	0/0:8,0:8:18.04:0,18,516	0/0:11,0:11:21.06:0,21,816	1/1:32,0:32:78.20:3249,78,0	0/0:17,0:17:51.15:0,51,1863	1/1:25,12:36:99:6241,105,0	1/1:13,14:28:54.03:3163,54,0	1/1:8,9:21:30.10:1990,30,0	0/0:25,0:25:72.21:0,72,3039	1/1:13,11:27:57.20:3970,57,0	1/1:4,10:17:30.10:2081,30,0	1/1:4,5:11:18.06:1121,18,0	1/1:7,6:17:5.75:1468,6,0	1/1:6,0:6:12.02:260,12,0	1/1:7,3:14:32.76:1341,33,0	1/1:11,22:35:87.21:5824,87,0	1/1:5,3:8:18.06:1219,18,0	0/0:12,0:12:33.11:0,33,1350	1/1:14,16:33:69.15:4313,69,0	1/1:10,8:20:24.08:1498,24,0	1/1:11,15:30:63.17:3999,63,0	1/1:10,7:22:66.17:3337,66,0	1/1:7,11:21:27.09:2005,27,0	1/1:1,0:1:3.01:144,3,0
chr10	41648180	.	TCTTAAATTAATTACTTAAAGTATTTA	T	31134.71	PASS	AC=40;AF=0.741;AN=54;BaseQRankSum=13.192;DP=449;FS=1.577;HRun=0;HaplotypeScore=263.1381;InbreedingCoeff=0.8303;MQ=46.59;MQ0=0;MQRankSum=-9.223;QD=85.30;ReadPosRankSum=-0.313;VQSLOD=4.1510;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,21:21:15.05:961,15,0	0/0:12,0:12:36.12:0,36,3694	./.	0/0:3,0:2:3.01:0,3,178	1/1:0,39:39:60.10:3166,60,0	0/0:14,0:14:42.14:0,42,4728	0/0:9,0:9:27.08:0,27,2740	1/1:0,37:37:99:2081,111,0	0/0:19,0:19:54.12:0,54,5112	1/1:0,24:24:60.01:3154,60,0	1/1:0,23:23:51.09:2499,51,0	1/1:0,19:19:21.07:1514,21,0	0/0:18,0:18:54.19:0,54,5332	1/1:0,11:11:21.07:1514,21,0	1/1:0,8:8:9.03:649,9,0	1/1:0,6:6:12.04:865,12,0	1/1:0,11:11:6.02:323,6,0	1/1:2,13:15:8.98:430,9,0	1/1:0,19:19:57.06:2414,57,0	1/1:0,36:36:54.12:3389,54,0	1/1:0,8:8:3.01:183,3,0	0/0:9,0:9:27.09:0,27,2057	1/1:0,17:17:33.11:2097,33,0	1/1:0,10:10:3.01:216,3,0	1/1:0,17:17:21.07:1362,21,0	1/1:0,23:23:60.08:3310,60,0	1/1:0,17:17:9.03:622,9,0	1/1:0,4:4:6.02:385,6,0
chr10	41648754	.	ACT	A	14532.97	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=12.301;DP=651;FS=5.544;HRun=0;HaplotypeScore=134.0379;InbreedingCoeff=0.9799;MQ=83.81;MQ0=1;MQRankSum=-4.908;QD=30.28;ReadPosRankSum=5.126;VQSLOD=6.7810;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,28:33:84.27:1070,84,0	0/0:12,0:12:36.12:0,36,602	0/0:34,0:32:65.46:0,65,965	0/0:26,0:25:55.03:0,55,912	1/1:5,28:33:78.22:976,78,0	0/0:19,0:19:51.17:0,51,853	0/0:18,0:18:48.16:0,48,801	1/1:10,20:30:57.18:725,57,0	0/0:19,0:19:51.17:0,51,844	1/1:6,15:21:48.14:599,48,0	1/1:5,25:30:66.21:833,66,0	1/1:1,20:21:54.17:688,54,0	0/0:14,0:14:36.11:0,36,573	1/1:4,24:28:66.21:840,66,0	1/1:2,20:22:54.17:688,54,0	1/1:4,22:26:60.19:764,60,0	1/1:3,24:27:66.21:840,66,0	1/1:1,5:6:15.05:189,15,0	1/1:3,11:14:33.11:420,33,0	1/1:3,24:27:72.23:917,72,0	1/1:2,26:27:69.22:879,69,0	0/0:29,0:29:81.28:0,81,1350	1/1:3,24:27:63.16:784,63,0	1/1:7,31:38:90.29:1146,90,0	1/1:0,15:15:45.14:573,45,0	1/1:2,17:19:51.16:648,51,0	1/1:7,26:33:69.22:878,69,0	1/1:0,2:2:6.02:76,6,0
chr10	41649413	.	GCTTATGGGTTTGAGCA	G	34395.32	PASS	AB=0.550;AC=39;AF=0.696;AN=56;BaseQRankSum=16.679;DP=564;FS=0.000;HRun=0;HaplotypeScore=282.3556;InbreedingCoeff=0.8841;MQ=84.44;MQ0=0;MQRankSum=-17.289;QD=91.23;ReadPosRankSum=8.014;VQSLOD=3.2470;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,25:32:57.20:2668,57,0	0/0:14,0:14:42.14:0,42,3211	0/0:24,0:23:69.17:0,69,4140	0/0:35,0:35:99:0,102,5105	1/1:7,15:22:42.14:1651,42,0	0/0:23,0:23:69.24:0,69,5435	0/0:21,0:21:63.22:0,63,4348	1/1:9,8:17:24.07:926,24,0	0/0:28,0:28:81.28:0,81,5814	1/1:7,21:27:57.19:2654,57,0	1/1:6,15:21:36.12:1620,36,0	1/1:4,16:20:45.15:2129,45,0	0/0:17,0:17:51.18:0,51,3791	1/1:1,12:13:36.12:1674,36,0	1/1:5,24:29:60.21:2788,60,0	0/1:4,18:22:99:2349,0,184	1/1:4,15:19:33.11:1562,33,0	1/1:2,4:6:12.04:518,12,0	1/1:5,13:18:39.13:1757,39,0	1/1:4,14:18:36.12:1667,36,0	1/1:4,5:9:6.02:284,6,0	0/0:25,0:25:72.25:0,72,5369	1/1:2,8:10:21.07:940,21,0	1/1:4,16:20:22.01:996,22,0	1/1:3,11:14:33.11:1511,33,0	1/1:4,17:21:51.17:2123,51,0	1/1:1,32:33:90.31:4154,90,0	1/1:2,3:5:9.03:426,9,0
chr10	41650679	.	CA	C	3716.88	PASS	AB=0.927;AC=42;AF=0.750;AN=56;BaseQRankSum=10.286;DP=336;FS=41.021;HRun=2;HaplotypeScore=87.7195;InbreedingCoeff=0.7108;MQ=52.75;MQ0=0;MQRankSum=-8.617;QD=14.81;ReadPosRankSum=4.740;VQSLOD=1.1912;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:19,5:26:50.52:365,51,0	0/0:4,0:4:9.01:0,9,95	0/0:22,0:14:36.01:0,36,398	0/0:17,0:13:26.82:0,27,283	1/1:3,5:8:14.77:101,15,0	0/0:14,0:14:24:0,24,294	0/0:20,0:20:57.02:0,57,647	1/1:14,5:19:53.33:385,53,0	0/0:8,0:8:8.03:0,8,88	1/1:3,8:12:29.77:232,30,0	1/1:5,6:11:17.39:117,17,0	1/1:3,5:7:14.95:120,15,0	0/1:14,1:15:30.08:30,0,107	1/1:5,7:12:29.85:226,30,0	1/1:4,11:15:41.88:331,42,0	1/1:3,8:11:29.85:227,30,0	1/1:5,5:9:13.74:99,14,0	1/1:4,2:5:5.98:48,6,0	1/1:9,3:12:26.75:205,27,0	1/1:4,2:6:5.99:48,6,0	1/1:5,2:7:8.95:68,9,0	0/1:10,1:11:34.81:35,0,61	1/1:3,4:7:17.83:126,18,0	1/1:11,4:14:35.60:265,36,0	1/1:5,6:12:29.85:239,30,0	1/1:5,6:11:23.40:169,23,0	1/1:4,9:14:30.39:242,30,0	1/1:0,1:2:5.86:38,6,0
chr10	41650680	.	AACCC	A	7658.77	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=9.733;DP=312;FS=24.985;HRun=0;HaplotypeScore=82.4074;InbreedingCoeff=0.9159;MQ=52.39;MQ0=1;MQRankSum=-9.512;QD=37.54;ReadPosRankSum=3.856;VQSLOD=3.1508;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:19,2:21:50.78:676,51,0	0/0:4,0:4:9.01:0,9,137	0/0:22,0:14:42:0,42,792	0/0:15,0:11:23.37:0,23,452	1/1:6,1:7:15.05:280,15,0	0/0:13,0:13:33.04:0,33,629	0/0:19,0:19:57.13:0,57,1288	1/1:5,12:19:53.55:661,54,0	0/0:8,0:8:14.95:0,15,141	1/1:11,0:11:30.09:492,30,0	1/1:6,2:8:18.06:301,18,0	1/1:8,0:7:15.04:245,15,0	0/0:15,0:15:36.01:0,36,524	1/1:7,4:11:30.10:567,30,0	1/1:12,3:15:42.13:730,42,0	1/1:10,1:11:32.86:508,33,0	1/1:7,0:8:14.87:198,15,0	1/1:2,4:5:6.02:117,6,0	1/1:8,1:9:26.97:332,27,0	1/1:3,0:3:6.02:106,6,0	1/1:5,1:6:9.44:98,9,0	0/0:12,0:12:30.06:0,30,411	1/1:4,2:7:17.98:292,18,0	1/1:10,4:14:35.82:519,36,0	1/1:10,2:12:29.93:464,30,0	1/1:6,3:9:24.08:418,24,0	1/1:11,0:13:33.11:558,33,0	1/1:3,0:2:6.02:95,6,0
chr10	41650681	.	AC	A	964.32	PASS	AB=1.000;AC=48;AF=0.857;AN=56;BaseQRankSum=7.699;DP=304;FS=36.141;HRun=10;HaplotypeScore=89.7506;InbreedingCoeff=0.5473;MQ=52.03;MQ0=2;MQRankSum=-6.526;QD=3.71;ReadPosRankSum=2.085;VQSLOD=-0.6036;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:20:18.91:58,19,0	0/0:3,0:3:3.01:0,3,33	0/0:23,0:13:14.22:0,14,165	0/1:15,0:11:1.83:2,0,48	1/1:7,0:7:10.55:32,11,0	0/1:12,0:12:2.49:2,0,163	0/0:18,0:18:35.88:0,36,337	1/1:19,0:19:17.02:52,17,0	1/1:4,3:7:2.99:26,3,0	1/1:10,0:10:18.52:56,19,0	1/1:8,0:8:12.41:37,12,0	1/1:7,0:6:8.15:25,8,0	1/1:6,9:15:7.02:156,7,0	1/1:11,0:11:21.44:66,21,0	1/1:15,0:15:27.41:86,27,0	1/1:11,0:11:16.94:51,17,0	1/1:9,0:8:5.94:19,6,0	1/1:6,0:5:4.26:13,4,0	1/1:9,0:9:8.33:25,8,0	1/1:3,0:3:4.07:12,4,0	1/1:6,0:6:2.04:6,2,0	1/1:6,5:11:16.94:132,17,0	1/1:7,0:7:10.55:32,11,0	1/1:14,0:13:15.45:48,15,0	1/1:12,0:12:15.22:45,15,0	1/1:9,0:9:16:48,16,0	1/1:14,0:13:22.41:68,22,0	1/1:3,0:2:4.07:12,4,0
chr10	41650688	.	CCCCT	C	5024.18	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=10.244;DP=291;FS=23.699;HRun=0;HaplotypeScore=87.9979;InbreedingCoeff=0.8026;MQ=51.37;MQ0=2;MQRankSum=-8.324;QD=25.77;ReadPosRankSum=3.595;VQSLOD=3.0157;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:13,6:19:38.82:362,39,0	0/0:1,0:1:3.01:0,3,84	0/0:24,0:12:36.10:0,36,666	0/0:16,0:10:3.31:0,3,281	1/1:4,5:9:14.97:162,15,0	0/0:11,0:11:31.33:0,31,655	0/0:16,0:16:48.13:0,48,1044	1/1:16,5:19:35.75:342,36,0	0/0:3,0:3:3.01:0,3,43	1/1:2,8:10:30.04:390,30,0	1/1:1,6:7:18.05:219,18,0	1/1:1,5:5:14.99:180,15,0	0/0:12,0:12:27.05:0,27,398	1/1:3,7:10:30.06:352,30,0	1/1:4,11:15:42:507,42,0	1/1:2,8:10:30:371,30,0	1/1:8,0:7:13.72:196,14,0	1/1:4,2:5:8.99:91,9,0	1/1:4,3:7:17.92:185,18,0	1/1:3,2:5:8.89:98,9,0	1/1:2,2:4:3.01:41,3,0	0/0:13,0:13:36.88:0,37,492	1/1:7,4:11:0.58:203,1,0	1/1:8,4:11:19.97:215,20,0	1/1:4,6:10:24.03:282,24,0	1/1:3,6:9:24.02:282,24,0	1/1:3,9:11:33.11:449,33,0	1/1:3,1:3:9:97,9,0
chr10	41650689	.	CCCT	C	3800.41	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=10.089;DP=288;FS=29.921;HRun=0;HaplotypeScore=87.1158;InbreedingCoeff=0.8199;MQ=51.07;MQ0=2;MQRankSum=-7.765;QD=19.59;ReadPosRankSum=2.850;VQSLOD=1.7729;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:17,2:19:40.74:286,41,0	0/0:1,0:1:3.01:0,3,70	0/0:24,0:11:32.82:0,33,500	0/0:16,0:10:8.68:0,9,212	1/1:9,0:9:14.55:106,15,0	0/0:11,0:11:28.80:0,29,487	0/0:15,0:15:45.12:0,45,802	1/1:19,0:17:35.16:258,35,0	0/0:3,0:3:3:0,3,28	1/1:9,1:10:30.02:313,30,0	1/1:7,0:7:17.87:165,18,0	1/1:6,0:5:14.97:142,15,0	0/0:12,0:12:23.09:0,23,254	1/1:10,0:10:29.50:247,30,0	1/1:15,0:15:41.60:384,42,0	1/1:10,0:10:29.77:273,30,0	1/1:4,5:8:17.85:151,18,0	1/1:6,0:5:8.83:70,9,0	1/1:7,0:7:17.65:151,18,0	1/1:5,0:5:8.88:79,9,0	1/1:4,0:4:3.01:32,3,0	0/0:12,0:12:26.21:0,26,304	1/1:11,0:11:0.28:153,0,0	1/1:12,0:11:19.02:142,19,0	1/1:9,1:10:23.71:215,24,0	1/1:9,0:9:21.88:200,22,0	1/1:10,2:11:33.08:349,33,0	1/1:3,1:3:9:85,9,0
chr10	41650774	.	TC	T	5210.71	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=8.627;DP=346;FS=69.021;HRun=8;HaplotypeScore=73.1464;InbreedingCoeff=0.9446;MQ=70.82;MQ0=3;MQRankSum=-3.738;QD=21.53;ReadPosRankSum=1.876;VQSLOD=-0.3235;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,24:31:48.07:463,48,0	0/0:2,0:2:3.01:0,3,36	0/0:21,0:17:28.04:0,28,361	0/0:23,0:15:24.79:0,25,246	1/1:0,14:14:41.95:379,42,0	0/0:13,0:13:36.11:0,36,435	0/0:16,0:16:39.10:0,39,449	1/1:4,17:19:48.02:442,48,0	0/0:10,0:10:21.06:0,21,254	1/1:2,11:13:23.74:205,24,0	1/1:0,5:5:15.02:144,15,0	1/1:0,6:6:15.02:145,15,0	0/0:10,0:10:27.07:0,27,311	1/1:0,8:8:21.03:202,21,0	1/1:1,10:11:17.08:248,17,0	1/1:1,3:4:9.01:87,9,0	1/1:1,14:15:33.02:310,33,0	1/1:0,9:9:24.04:232,24,0	1/1:0,8:8:21.03:202,21,0	1/1:1,13:14:29.99:280,30,0	1/1:1,17:18:39.01:367,39,0	0/0:9,0:9:21.06:0,21,254	1/1:0,8:8:21.03:203,21,0	1/1:1,13:14:24.04:231,24,0	1/1:0,13:13:36.06:347,36,0	1/1:0,6:6:18.03:174,18,0	1/1:0,16:16:42.07:405,42,0	1/1:2,6:7:15.02:145,15,0
chr10	41650855	.	A	ATCTCTC	944.55	PASS	AB=1.000;AC=31;AF=0.646;AN=48;BaseQRankSum=1.210;DP=415;FS=1.778;HRun=0;HaplotypeScore=181.2371;InbreedingCoeff=0.3902;MQ=64.93;MQ0=12;MQRankSum=-0.541;QD=4.07;ReadPosRankSum=1.957;VQSLOD=2.4920;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:15,0:13:0:0,0,0	1/1:8,0:8:9.38:66,9,0	./.	./.	0/1:14,0:14:0:0,0,0	0/0:9,0:13:3.01:0,3,42	0/0:11,0:11:6.02:0,6,100	1/1:21,0:19:6.49:113,6,0	0/0:11,5:17:2.98:0,3,21	1/1:18,0:17:14.63:149,15,0	1/1:24,0:24:0.17:20,0,0	0/1:13,0:12:0.48:0,0,39	1/1:16,1:19:18.39:261,18,0	1/1:13,0:13:3.01:55,3,0	0/0:13,0:12:4.95:0,5,24	1/1:8,0:7:3:29,3,0	1/1:13,0:13:6.02:93,6,0	./.	1/1:10,0:10:3.90:47,4,0	1/1:16,0:16:5.11:36,5,0	0/0:16,0:16:0.47:0,0,1	0/0:10,2:14:0.44:0,0,1	1/1:8,0:8:1.85:6,2,0	1/1:6,0:6:3.01:52,3,0	0/0:14,0:14:1.26:0,1,18	1/1:11,0:11:6.02:101,6,0	1/1:14,0:14:3.01:40,3,0	./.
chr10	41650885	.	C	CCA	74.31	PASS	AB=0.913;AC=6;AF=0.107;AN=56;BaseQRankSum=6.157;DP=312;FS=26.975;HRun=0;HaplotypeScore=103.6046;InbreedingCoeff=0.0195;MQ=40.03;MQ0=23;MQRankSum=-3.905;QD=1.43;ReadPosRankSum=1.910;VQSLOD=0.1857;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:9,1:7:2.50:9,2,0	0/0:8,0:8:16.61:0,17,172	0/0:14,0:3:8.82:0,9,105	0/0:15,0:2:6.02:0,6,90	0/0:9,1:10:3.01:0,3,46	0/0:14,0:14:18.05:0,18,255	0/0:19,0:19:39.13:0,39,573	0/0:14,0:10:13.31:0,13,246	0/0:15,0:14:15.05:0,15,231	0/1:12,2:13:99:126,0,256	0/0:14,4:18:6.26:0,6,89	0/0:8,4:11:1.94:0,2,76	0/0:20,0:18:20.74:0,21,220	0/0:6,1:7:2.57:0,3,48	0/1:8,0:7:0.56:1,0,31	0/1:5,2:6:12.70:13,0,36	0/0:9,2:9:17.04:0,17,153	0/0:2,0:1:3.01:0,3,39	0/0:6,0:5:5.90:0,6,54	0/1:13,0:13:27.82:28,0,109	0/0:10,0:10:9.03:0,9,126	0/0:15,0:15:5.95:0,6,92	0/0:4,1:5:3.01:0,3,36	0/0:5,0:5:0:0,0,0	0/0:7,3:10:5.91:0,6,71	0/0:14,0:14:6.46:0,6,295	0/0:9,0:9:3.65:0,4,198	0/0:7,0:4:9.03:0,9,114
chr10	41650890	.	T	TGTAACC	2561.30	PASS	AB=0.927;AC=18;AF=0.321;AN=56;BaseQRankSum=10.003;DP=359;FS=35.343;HRun=0;HaplotypeScore=189.0447;InbreedingCoeff=-0.2512;MQ=38.88;MQ0=26;MQRankSum=-7.000;QD=12.02;ReadPosRankSum=4.999;VQSLOD=1.5060;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:8,1:6:3.78:17,0,4	0/0:7,0:7:18.06:0,18,360	0/0:13,0:1:3.01:0,3,30	0/0:14,0:1:3.01:0,3,76	0/0:11,1:12:2.70:0,3,48	0/0:15,0:15:21.05:0,21,417	0/0:18,0:18:39.08:0,39,880	0/1:20,0:16:99:134,0,106	0/0:15,0:14:15.05:0,15,350	0/1:14,2:15:99:582,0,347	0/1:20,3:23:3.13:3,0,61	0/1:9,4:12:3.86:147,0,4	0/0:21,0:19:3.49:0,3,422	1/1:9,1:10:10.08:121,10,0	0/1:11,0:10:58.02:59,0,58	0/1:5,2:6:39.11:108,0,39	0/1:14,2:14:84.89:184,0,85	0/0:2,0:1:1.55:0,2,4	0/1:5,0:4:3.64:110,0,4	0/1:16,0:16:16.65:267,0,17	0/0:12,0:12:3.60:0,4,21	0/0:17,0:17:12.46:0,12,167	0/1:7,1:8:8.38:8,0,56	0/1:7,0:7:3.84:16,0,4	0/1:13,3:16:75.21:119,0,75	0/1:14,0:14:24.05:562,0,24	0/1:15,0:15:28.85:260,0,29	0/1:7,0:4:13.42:13,0,31
chr10	41650894	.	T	TCCATCCCTGTAACCCCCC	14297.26	PASS	AB=0.870;AC=29;AF=0.537;AN=54;BaseQRankSum=8.929;DP=357;FS=47.962;HRun=0;HaplotypeScore=230.6593;InbreedingCoeff=0.4015;MQ=40.62;MQ0=25;MQRankSum=-7.477;QD=63.54;ReadPosRankSum=2.712;VQSLOD=2.8376;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:11:27.09:826,27,0	0/0:7,0:7:18.06:0,18,801	0/0:13,0:2:2.93:0,3,52	0/0:13,0:1:3.01:0,3,149	0/0:11,0:11:1.29:0,1,3	0/0:14,0:14:18.02:0,18,681	0/0:19,0:19:42.11:0,42,1754	0/1:22,0:19:1.67:1418,0,2	0/0:16,0:15:18.03:0,18,739	1/1:22,0:21:0.42:2553,0,0	1/1:24,0:24:24.55:912,25,0	1/1:14,0:13:39.13:1302,39,0	0/0:20,0:18:26.23:0,26,916	1/1:11,0:11:29.08:644,29,0	1/1:11,0:10:17.41:1020,17,0	1/1:8,0:7:15.05:455,15,0	0/1:16,0:14:55.80:804,0,56	1/1:6,0:5:5.80:284,6,0	0/1:6,1:6:11.84:525,0,12	0/1:5,3:8:4.55:371,0,5	1/1:11,0:11:6.02:79,6,0	0/0:16,0:16:9.03:0,9,323	0/1:9,0:9:2.65:132,0,3	1/1:7,0:7:7.10:60,7,0	1/1:17,0:17:4.62:961,5,0	0/1:3,3:9:1.35:1331,0,1	0/1:7,1:8:9.29:620,0,9	./.
chr10	41650919	.	G	GTA	2461.30	PASS	AB=0.971;AC=30;AF=0.556;AN=54;BaseQRankSum=-1.474;DP=403;FS=24.000;HRun=0;HaplotypeScore=107.6530;InbreedingCoeff=0.3343;MQ=56.75;MQ0=17;MQRankSum=0.166;QD=9.77;ReadPosRankSum=2.525;VQSLOD=1.8107;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:20:20.93:164,21,0	0/0:5,0:5:14.04:0,14,130	0/0:33,0:13:31.73:0,32,292	0/0:33,0:15:39:0,39,393	1/1:7,2:9:11.97:98,12,0	0/0:20,0:20:47.98:0,48,466	0/0:18,0:18:38.99:0,39,510	0/1:18,8:25:10.63:479,0,11	0/0:11,0:11:5.92:0,6,43	0/1:19,0:19:76.25:208,0,76	0/0:5,8:14:0.34:0,0,1	1/1:10,0:11:8.78:127,9,0	0/1:19,0:17:10.05:10,0,28	1/1:11,0:11:2.73:66,3,0	1/1:9,0:8:12:122,12,0	0/1:13,0:13:3.71:44,0,4	1/1:16,0:15:15.44:176,15,0	0/1:7,0:6:23.42:48,0,23	0/1:7,0:7:21.58:145,0,22	1/1:11,0:11:10.67:85,11,0	1/1:16,0:16:17.97:166,18,0	0/0:17,0:17:8.16:0,8,77	1/1:7,0:7:6.34:74,6,0	1/1:10,0:10:14.98:144,15,0	1/1:17,0:18:16.24:147,16,0	0/1:10,0:10:38.55:145,0,39	0/1:11,0:11:1.78:194,0,2	./.
chr10	41651396	.	A	AAC	3017.99	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-2.652;DP=756;FS=1.018;HRun=0;HaplotypeScore=136.0173;InbreedingCoeff=0.9981;MQ=85.01;MQ0=0;MQRankSum=-1.899;QD=37.26;ReadPosRankSum=1.328;VQSLOD=5.3401;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,99,1272	0/0:11,0:11:27.09:0,27,351	0/0:28,0:28:63.20:0,63,818	0/0:26,0:26:54:0,54,669	0/0:29,0:29:72.23:0,72,936	0/0:38,0:38:99:0,102,1313	0/0:18,0:18:48.16:0,48,624	0/0:46,0:46:99:0,129,1653	0/0:20,0:20:51.17:0,51,663	0/0:37,0:37:99:0,99,1264	0/0:20,0:20:39.13:0,39,507	1/1:6,22:28:72.24:1183,72,0	0/0:22,0:22:57.16:0,57,725	0/0:29,0:29:81.25:0,81,1038	0/0:37,0:36:93.18:0,93,1153	0/0:21,0:21:63.19:0,63,805	0/0:26,0:26:66.19:0,66,840	0/0:15,0:15:39.13:0,39,507	0/0:26,0:26:63.18:0,63,803	0/0:32,0:32:78.20:0,78,981	0/0:34,0:34:84.26:0,84,1077	0/0:23,0:23:60.20:0,60,780	1/1:6,20:26:57.19:959,57,0	1/1:6,20:27:59.24:1019,59,0	0/0:28,0:28:78.25:0,78,1015	0/0:38,0:38:93.29:0,93,1194	0/0:28,0:28:69.22:0,69,897	0/0:8,0:8:21.07:0,21,273
chr10	41651472	.	TCTC	T	14541.33	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=15.662;DP=733;FS=0.278;HRun=0;HaplotypeScore=162.5350;InbreedingCoeff=0.9982;MQ=81.68;MQ0=0;MQRankSum=-7.348;QD=42.52;ReadPosRankSum=1.090;VQSLOD=5.7012;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,123,2654	0/0:6,0:6:18.06:0,18,415	0/0:28,0:27:75.22:0,75,1492	0/0:26,0:26:66.19:0,66,1297	0/0:35,0:35:99:0,105,2381	0/0:36,0:36:99:0,105,2245	0/0:16,0:16:45.15:0,45,1036	1/1:1,22:23:63.12:979,63,0	0/0:31,0:31:90.30:0,90,2013	1/1:1,44:45:99:2079,129,0	1/1:1,23:24:50.98:770,51,0	0/0:28,0:28:78.25:0,78,1749	0/0:28,0:28:84.27:0,84,1891	0/0:26,0:26:78.27:0,78,1797	1/1:0,40:40:99:1838,108,0	0/0:24,0:24:69.24:0,69,1572	1/1:0,29:29:75.26:1277,75,0	1/1:0,10:10:27.09:460,27,0	1/1:1,18:19:54.16:870,54,0	1/1:1,29:30:69.20:1138,69,0	1/1:0,28:28:69.24:1176,69,0	0/0:19,0:19:54.19:0,54,1226	0/0:23,0:23:69.24:0,69,1590	0/0:23,0:23:66.22:0,66,1458	1/1:2,20:22:45.15:767,45,0	1/1:3,32:35:96.26:1551,96,0	1/1:0,29:29:75.26:1278,75,0	1/1:0,8:8:21.07:358,21,0
chr10	41652037	.	AT	A	501.93	PASS	AB=0.578;AC=16;AF=0.296;AN=54;BaseQRankSum=9.079;DP=437;FS=1.369;HRun=1;HaplotypeScore=117.6379;InbreedingCoeff=0.7602;MQ=81.69;MQ0=2;MQRankSum=-8.510;QD=11.41;ReadPosRankSum=-0.009;VQSLOD=1.8265;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,7:7:17.85:125,18,0	1/1:0,3:3:8.97:74,9,0	0/0:33,0:28:32.29:0,32,752	0/0:30,0:26:45.92:0,46,611	1/1:1,0:1:2.99:23,3,0	0/0:24,0:24:70.11:0,70,1067	0/0:32,0:32:96.31:0,96,1498	0/0:27,0:27:78.09:0,78,1073	0/0:18,0:18:54.18:0,54,858	1/1:2,5:7:0.40:85,0,0	0/1:1,4:5:3.31:30,0,3	0/0:22,0:22:66.18:0,66,979	0/0:18,0:18:54.17:0,54,833	0/1:1,2:3:6.20:30,0,6	1/1:2,6:8:23.82:172,24,0	1/1:0,5:5:14.83:100,15,0	0/0:13,0:13:39.12:0,39,593	./.	0/0:11,0:11:32.94:0,33,448	0/0:20,0:20:57.17:0,57,839	0/0:33,0:33:93.24:0,93,1388	0/0:19,0:19:57.19:0,57,902	0/0:22,0:22:63.16:0,63,898	0/0:25,0:25:72.22:0,72,1113	1/1:1,4:5:6.85:41,7,0	0/0:17,0:17:45.13:0,45,686	0/0:18,0:18:54.11:0,54,777	0/0:10,0:10:30.09:0,30,458
chr10	41652039	.	CTCTG	C	1126.44	PASS	AB=0.578;AC=14;AF=0.269;AN=52;BaseQRankSum=8.127;DP=433;FS=3.137;HRun=0;HaplotypeScore=145.8046;InbreedingCoeff=0.7837;MQ=83.28;MQ0=2;MQRankSum=-8.124;QD=28.16;ReadPosRankSum=0.148;VQSLOD=3.4727;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,7:7:18.06:250,18,0	1/1:0,3:3:9.03:122,9,0	0/0:32,0:28:62:0,62,1383	0/0:31,0:26:42.28:0,42,1172	./.	0/0:21,0:21:63.22:0,63,1763	0/0:32,0:32:96.33:0,96,2768	0/0:28,0:28:67.69:0,68,664	0/0:18,0:18:54.18:0,54,1516	1/1:1,5:6:3.57:197,4,0	0/1:1,4:5:1.16:75,0,1	0/0:22,0:22:61.40:0,61,748	0/0:18,0:18:54.19:0,54,1541	0/1:1,2:3:17.93:73,0,18	1/1:0,6:7:21.07:291,21,0	1/1:0,5:5:15.05:209,15,0	0/0:13,0:13:38.15:0,38,452	./.	0/0:13,0:13:25.59:0,26,318	0/0:20,0:20:56.10:0,56,638	0/0:35,0:35:94.93:0,95,1086	0/0:18,0:18:54.19:0,54,1547	0/0:20,0:20:56.33:0,56,651	0/0:26,0:26:73.85:0,74,894	1/1:0,4:4:6.91:85,7,0	0/0:17,0:17:44.60:0,45,465	0/0:17,0:17:49.37:0,49,639	0/0:10,0:10:30.10:0,30,405
chr10	41652501	.	AGGTCCGT	A	1660.14	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=4.247;DP=671;FS=1.712;HRun=0;HaplotypeScore=198.7229;InbreedingCoeff=0.9973;MQ=86.33;MQ0=0;MQRankSum=-7.694;QD=55.34;ReadPosRankSum=-2.197;VQSLOD=3.3792;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,147,5613	0/0:11,0:11:30.08:0,30,1101	0/0:22,0:22:63.20:0,63,2059	0/0:23,0:23:63.35:0,63,2252	1/1:1,11:12:21.07:545,21,0	0/0:21,0:21:63.22:0,63,2519	0/0:35,0:35:99:0,99,3917	0/0:22,0:22:63.21:0,63,2369	0/0:21,0:21:60.21:0,60,2376	0/0:32,0:32:90.31:0,90,3528	0/0:13,0:13:39.13:0,39,1515	0/0:32,0:32:96.32:0,96,3695	0/0:21,0:21:57.20:0,57,2184	1/1:2,16:18:48.16:1236,48,0	0/0:34,0:34:99:0,99,3628	0/0:21,0:21:63.21:0,63,2403	0/0:33,0:33:93.32:0,93,3604	0/0:32,0:32:87.30:0,87,3453	0/0:25,0:25:69.21:0,69,2540	0/0:16,0:16:45.15:0,45,1760	0/0:34,0:34:90.31:0,90,3475	0/0:20,0:20:54.19:0,54,1979	0/0:17,0:17:42.14:0,42,1649	0/0:29,0:29:84.27:0,84,3179	0/0:24,0:24:66.17:0,66,2416	0/0:19,0:19:54.19:0,54,2145	0/0:22,0:22:63.18:0,63,2243	0/0:10,0:10:30.10:0,30,1126
chr10	41652519	.	A	AG	11896	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-5.407;DP=667;FS=2.984;HRun=4;HaplotypeScore=82.1791;InbreedingCoeff=0.9996;MQ=84.73;MQ0=0;MQRankSum=-2.491;QD=33.14;ReadPosRankSum=1.229;VQSLOD=5.4774;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,123,1381	0/0:11,0:11:30.08:0,30,340	0/0:20,0:20:57.15:0,57,637	0/0:22,0:22:47.61:0,48,509	1/1:1,16:17:33.11:444,33,0	0/0:21,0:21:60.15:0,60,669	0/0:30,0:30:78.20:0,78,874	1/1:4,18:22:51.17:698,51,0	0/0:20,0:20:57.16:0,57,647	1/1:4,34:38:99:1318,99,0	1/1:1,14:15:42.14:574,42,0	0/0:27,0:27:75.21:0,75,847	0/0:22,0:22:63.18:0,63,715	1/1:7,16:23:33.11:444,33,0	1/1:5,23:28:66.22:895,66,0	0/0:22,0:22:54.15:0,54,613	1/1:2,32:34:90.30:1231,90,0	1/1:4,28:32:72.24:985,72,0	1/1:2,20:22:29.17:786,29,0	1/1:2,15:17:39.09:512,39,0	1/1:1,28:30:81.27:1108,81,0	0/0:18,0:18:45.11:0,45,501	0/0:19,0:19:54.13:0,54,601	0/0:29,0:29:78.20:0,78,874	1/1:1,19:20:54.18:739,54,0	1/1:1,25:26:75.19:973,75,0	1/1:4,22:26:60.09:819,60,0	1/1:0,9:9:27.09:369,27,0
chr10	41652688	.	CTGAGTGTAG	C	2831.99	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.034;DP=687;FS=0.000;HRun=0;HaplotypeScore=217.8924;InbreedingCoeff=0.9960;MQ=93.55;MQ0=0;MQRankSum=-9.301;QD=56.64;ReadPosRankSum=0.167;VQSLOD=3.0438;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,151,7075	0/0:10,0:10:30.10:0,30,1400	0/0:27,0:27:78.25:0,78,3173	0/0:34,0:34:93.32:0,93,4044	1/1:1,13:14:27.06:605,27,0	0/0:21,0:21:60.21:0,60,2874	0/0:25,0:25:66.23:0,66,3212	0/0:42,0:42:99:0,117,4389	0/0:21,0:21:57.20:0,57,2596	0/0:26,0:26:75.25:0,75,2855	0/0:23,0:23:63.22:0,63,2457	0/0:24,0:24:66.21:0,66,3031	0/0:27,0:27:81.28:0,81,3753	1/1:2,17:19:48.16:1468,48,0	0/0:30,0:30:87.30:0,87,3449	0/0:26,0:26:78.27:0,78,3667	1/1:2,15:17:30.10:902,30,0	0/0:25,0:25:69.24:0,69,2728	0/0:30,0:30:87.30:0,87,3323	0/0:17,0:17:42.14:0,42,1710	0/0:25,0:25:69.24:0,69,2748	0/0:18,0:18:54.19:0,54,2606	0/0:11,0:11:27.09:0,27,1305	0/0:36,0:36:96.33:0,96,4640	0/0:32,0:32:93.32:0,93,3575	0/0:25,0:25:75.24:0,75,2821	0/0:24,0:24:72.25:0,72,2935	0/0:8,0:8:18.06:0,18,729
chr10	41653065	.	AGGTGTG	A	4293.62	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=12.474;DP=636;FS=3.784;HRun=0;HaplotypeScore=165.4065;InbreedingCoeff=0.9912;MQ=79.49;MQ0=1;MQRankSum=-12.366;QD=44.26;ReadPosRankSum=3.260;VQSLOD=4.8069;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,141,4756	0/0:10,0:10:30.10:0,30,1038	0/0:23,0:23:66.70:0,67,2024	0/0:20,0:20:54.17:0,54,1519	1/1:1,15:16:24.08:576,24,0	0/0:20,0:20:57.20:0,57,1998	0/0:24,0:24:69.24:0,69,2411	0/0:37,0:37:99:0,108,3603	0/0:29,0:29:87.30:0,87,3062	0/0:20,0:20:57.20:0,57,1937	0/0:19,0:19:57.20:0,57,2055	1/1:1,27:28:66.18:1531,66,0	0/0:25,0:25:69.24:0,69,2445	1/1:2,14:16:36.12:865,36,0	0/0:27,0:27:78.27:0,78,2737	0/0:16,0:16:45.15:0,45,1394	1/1:4,10:14:18.06:432,18,0	0/0:24,0:24:72.20:0,72,2416	0/0:25,0:25:72.25:0,72,2570	0/0:11,0:11:33.11:0,33,1189	0/0:42,0:42:99:0,123,4152	0/0:22,0:22:66.23:0,66,2289	1/1:1,8:9:12.02:240,12,0	1/1:2,12:14:27.09:648,27,0	0/0:31,0:31:93.32:0,93,3266	0/0:25,0:25:75.26:0,75,2586	0/0:25,0:25:75.24:0,75,2530	0/0:10,0:10:30.10:0,30,1067
chr10	41654275	.	C	CT	2927.64	PASS	AB=0.667;AC=27;AF=0.482;AN=56;BaseQRankSum=11.721;DP=473;FS=0.855;HRun=12;HaplotypeScore=117.4964;InbreedingCoeff=0.8884;MQ=64.45;MQ0=0;MQRankSum=-3.448;QD=12.05;ReadPosRankSum=-2.903;VQSLOD=2.3956;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,0:21:34.69:201,35,0	0/0:8,0:9:16.92:0,17,115	0/0:10,0:10:14.45:0,14,96	0/0:5,0:4:2.97:0,3,22	0/0:2,0:17:29.06:0,29,86	0/0:25,0:26:64.03:0,64,450	0/0:21,0:24:56.79:0,57,390	1/1:6,23:29:60.10:584,60,0	0/0:9,0:11:27.89:0,28,182	1/1:12,0:20:25.57:128,26,0	1/1:13,2:24:37.69:233,38,0	0/0:16,0:18:31.75:0,32,224	0/0:22,0:22:50.55:0,51,369	0/0:3,0:15:22.39:0,22,65	1/1:6,0:11:14.20:71,14,0	1/1:6,0:15:38.08:218,38,0	0/0:23,0:23:47.68:0,48,348	1/1:5,0:10:14.34:77,14,0	0/1:5,5:10:0.92:144,0,1	1/1:9,14:23:48.06:458,48,0	1/1:6,5:12:5.17:82,5,0	0/0:16,0:16:35.78:0,36,263	0/0:20,0:22:45.78:0,46,318	0/0:12,0:12:35.66:0,36,250	1/1:6,2:14:28.95:194,29,0	1/1:13,8:21:11.60:263,12,0	1/1:10,14:23:25.30:414,25,0	1/1:4,4:9:5.17:82,5,0
chr10	41654337	.	AATTTAAACATAGGCAAT	A	21220.47	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=17.023;DP=455;FS=5.984;HRun=0;HaplotypeScore=244.5001;InbreedingCoeff=0.9602;MQ=79.71;MQ0=0;MQRankSum=-15.386;QD=102.51;ReadPosRankSum=3.220;VQSLOD=3.9140;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,15:15:30.10:1416,30,0	0/0:8,0:8:24.08:0,24,1973	0/0:20,0:20:54.18:0,54,2930	0/0:10,0:10:27.09:0,27,1476	0/0:30,0:30:81.28:0,81,6586	0/0:22,0:22:63.21:0,63,4485	0/0:22,0:22:63.22:0,63,4840	1/1:1,17:18:50.79:910,51,0	0/0:18,0:18:54.19:0,54,4046	1/1:2,17:19:45:1970,45,0	1/1:2,22:24:54.10:2422,54,0	0/0:17,0:17:51.15:0,51,3498	0/0:21,0:21:63.22:0,63,4942	0/0:21,0:21:63.22:0,63,4914	1/1:3,17:20:45.15:2234,45,0	1/1:4,11:15:33.11:1638,33,0	0/0:14,0:14:42.13:0,42,3089	1/1:0,9:9:21.07:1043,21,0	1/1:2,8:10:21.03:671,21,0	1/1:2,16:18:42.04:1702,42,0	1/1:0,4:4:6.02:298,6,0	0/0:17,0:17:48.16:0,48,3683	0/0:17,0:17:51.18:0,51,4034	0/0:11,0:11:33.10:0,33,2466	1/1:4,12:16:36.12:1786,36,0	1/1:0,18:18:48.16:2302,48,0	1/1:1,18:19:54.19:2681,54,0	1/1:1,1:2:3.01:149,3,0
chr10	41655202	.	A	AG	13621.43	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-12.030;DP=614;FS=3.424;HRun=0;HaplotypeScore=63.3198;InbreedingCoeff=0.9982;MQ=88.68;MQ0=0;MQRankSum=-2.727;QD=42.83;ReadPosRankSum=-0.399;VQSLOD=5.2187;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,37:39:90.31:1425,90,0	0/0:6,0:6:18.06:0,18,250	0/0:22,0:22:57.15:0,57,731	0/0:22,0:22:59.35:0,59,741	0/0:20,0:20:57.19:0,57,794	0/0:21,0:21:62.70:0,63,846	0/0:24,0:24:72.18:0,72,967	1/1:1,18:19:54.15:812,54,0	0/0:28,0:28:84.28:0,84,1173	1/1:0,31:31:90.28:1403,90,0	1/1:0,11:11:33.02:471,33,0	0/0:17,0:17:51.16:0,51,689	0/0:18,0:18:54.18:0,54,751	0/0:14,0:14:42.14:0,42,586	1/1:1,30:31:81.28:1294,81,0	1/1:0,26:26:69.24:1103,69,0	0/0:29,0:29:87.25:0,87,1174	1/1:0,14:14:39.13:610,39,0	1/1:0,17:17:51.16:783,51,0	1/1:1,9:10:30.10:473,30,0	1/1:6,29:35:99:1621,105,0	0/0:28,0:28:84.28:0,84,1159	0/0:23,0:23:63.21:0,63,871	0/0:24,0:24:72.22:0,72,987	1/1:0,24:24:66.23:1053,66,0	1/1:2,18:20:60.20:929,60,0	1/1:5,28:34:87.23:1321,87,0	1/1:0,7:7:21.07:323,21,0
chr10	41655282	.	TA	T	5575.66	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=12.968;DP=590;FS=12.243;HRun=4;HaplotypeScore=91.1682;InbreedingCoeff=0.9943;MQ=81.53;MQ0=0;MQRankSum=-2.239;QD=32.99;ReadPosRankSum=-2.962;VQSLOD=2.9918;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,114,1569	0/0:11,0:11:33.11:0,33,462	0/0:13,0:13:32.69:0,33,425	0/0:20,0:20:51.16:0,51,654	0/0:23,0:23:69.23:0,69,965	0/0:15,0:15:39.13:0,39,545	0/0:16,0:16:48.10:0,48,632	1/1:2,33:35:99:1187,99,0	0/0:19,0:19:51.17:0,51,711	0/0:16,0:16:45.13:0,45,607	0/0:17,0:17:48.15:0,48,646	0/0:22,0:22:63.21:0,63,881	0/0:16,0:16:42.13:0,42,566	0/0:21,0:21:63.20:0,63,860	0/0:26,0:26:66.22:0,66,921	0/0:19,0:19:48.16:0,48,664	0/0:29,0:29:81.27:0,81,1134	0/0:21,0:21:60.20:0,60,836	1/1:1,16:17:48.13:562,48,0	1/1:0,16:16:48.15:576,48,0	1/1:2,29:31:84.24:995,84,0	0/0:16,0:16:45.13:0,45,598	0/0:19,0:19:57.19:0,57,797	0/0:24,0:24:69.23:0,69,966	0/0:15,0:15:36.11:0,36,488	1/1:3,29:32:12.23:986,12,0	1/1:3,26:29:81.22:947,81,0	1/1:0,9:9:27.08:323,27,0
chr10	41655616	.	A	AG	15692.52	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=17.213;DP=616;FS=5.336;HRun=1;HaplotypeScore=134.5362;InbreedingCoeff=0.9901;MQ=85.88;MQ0=0;MQRankSum=-6.813;QD=39.93;ReadPosRankSum=1.536;VQSLOD=4.1974;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,43:48:99:1832,126,0	0/0:12,0:12:33.11:0,33,428	0/0:32,0:32:84.07:0,84,973	0/0:25,0:25:68:0,68,843	0/0:18,0:18:48.12:0,48,604	0/0:20,0:20:54.16:0,54,687	0/0:20,0:20:60.20:0,60,779	1/1:5,18:23:57.19:840,57,0	0/0:25,0:25:75.24:0,75,974	1/1:1,15:16:45.15:674,45,0	1/1:0,7:7:18.06:269,18,0	1/1:1,25:26:66.22:988,66,0	0/0:16,0:16:45.13:0,45,570	0/0:30,0:30:87.27:0,87,1115	1/1:4,19:23:63.21:931,63,0	1/1:0,20:20:60.20:899,60,0	1/1:2,30:32:81.27:1214,81,0	1/1:0,20:20:57.19:852,57,0	1/1:5,20:25:63.20:920,63,0	1/1:0,15:15:45.15:673,45,0	1/1:0,39:39:99:1587,108,0	0/0:25,0:25:63.19:0,63,804	1/1:2,17:19:48.12:693,48,0	1/1:1,21:22:63.21:944,63,0	1/1:1,20:21:63.17:919,63,0	1/1:1,17:18:48.16:719,48,0	1/1:2,13:15:42.11:605,42,0	1/1:0,4:4:9.03:135,9,0
chr10	41656177	.	T	TCA	2262.51	PASS	AB=0.902;AC=41;AF=0.788;AN=52;BaseQRankSum=6.279;DP=651;FS=11.082;HRun=0;HaplotypeScore=141.8931;InbreedingCoeff=0.4724;MQ=59.09;MQ0=32;MQRankSum=-4.199;QD=4.51;ReadPosRankSum=-1.933;VQSLOD=1.9128;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:39,0:34:17.17:124,17,0	0/1:15,1:16:32.50:32,0,86	./.	./.	0/0:19,0:19:9:0,9,89	1/1:19,6:26:8.97:133,9,0	0/1:23,6:30:25.58:202,0,26	1/1:30,0:24:18.83:104,19,0	1/1:13,9:24:21.07:312,21,0	1/1:26,0:23:19.73:90,20,0	1/1:15,0:14:4.82:31,5,0	0/0:21,0:21:12.03:0,12,130	1/1:9,1:14:6.01:71,6,0	0/0:22,0:22:33.09:0,33,358	1/1:32,0:28:7.83:58,8,0	1/1:29,0:27:23.13:157,23,0	1/1:19,0:37:26.67:220,27,0	1/1:17,0:15:5.57:74,6,0	1/1:19,0:18:18.03:91,18,0	1/1:17,0:16:11.93:89,12,0	1/1:24,0:21:5.98:51,6,0	1/1:12,9:25:5.99:89,6,0	0/1:17,1:19:32.18:32,0,68	0/0:40,0:40:26.52:0,27,555	1/1:16,0:13:8.88:61,9,0	1/1:25,0:23:36.59:217,37,0	1/1:19,0:17:26.96:164,27,0	1/1:2,0:2:2.99:24,3,0
chr10	41656188	.	C	CA	2704.29	PASS	AB=0.671;AC=16;AF=0.286;AN=56;BaseQRankSum=1.560;DP=702;FS=24.552;HRun=1;HaplotypeScore=122.0560;InbreedingCoeff=-0.1249;MQ=49.47;MQ0=44;MQRankSum=-5.613;QD=7.70;ReadPosRankSum=1.720;VQSLOD=-0.4339;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,27:36:2.18:275,2,0	0/0:18,0:18:52.41:0,52,655	0/0:26,0:8:18.06:0,18,229	0/0:27,0:17:51.16:0,51,641	0/0:19,0:19:51.16:0,51,648	0/0:24,0:24:46.18:0,46,544	0/0:34,0:33:72.31:0,72,834	0/1:25,19:38:99:389,0,659	0/0:21,0:21:26.49:0,26,237	0/1:14,15:27:99:463,0,191	0/1:8,7:13:29.48:56,0,29	0/0:19,0:19:54.17:0,54,690	0/0:14,0:14:26.57:0,27,312	0/0:24,0:24:69.22:0,69,885	0/1:15,17:28:46.33:129,0,46	0/1:11,18:27:99:219,0,137	0/0:39,0:39:52.09:0,52,545	0/1:13,7:18:99:189,0,160	0/1:9,11:19:99:364,0,182	0/1:13,13:24:49.44:111,0,49	0/1:15,16:27:54.58:55,0,160	0/0:28,0:28:33.74:0,34,390	0/0:23,0:23:55.32:0,55,651	0/0:35,0:35:84.19:0,84,1062	1/1:8,11:16:5.97:51,6,0	0/1:11,15:24:99:379,0,310	0/1:7,8:13:99:170,0,116	0/1:2,1:2:14.93:15,0,32
chr10	41656537	.	TC	T	10436.07	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=15.378;DP=602;FS=2.109;HRun=2;HaplotypeScore=80.7317;InbreedingCoeff=0.9990;MQ=81.81;MQ0=0;MQRankSum=-9.502;QD=34.90;ReadPosRankSum=1.900;VQSLOD=5.3703;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,28:28:69.22:891,69,0	0/0:9,0:9:27.09:0,27,404	0/0:25,0:25:66.82:0,67,907	0/0:25,0:25:66.44:0,66,883	0/0:21,0:21:60.18:0,60,857	0/0:21,0:21:63.20:0,63,924	0/0:23,0:23:63.19:0,63,901	1/1:0,29:29:84.17:998,84,0	0/0:30,0:30:90.23:0,90,1246	1/1:0,28:28:84.26:1074,84,0	1/1:0,16:16:42.06:544,42,0	0/0:17,0:17:48.12:0,48,651	0/0:24,0:24:72.22:0,72,1038	0/0:18,0:18:48.15:0,48,687	1/1:0,18:18:51.17:659,51,0	1/1:3,24:27:36.38:930,36,0	0/0:23,0:23:63.18:0,63,900	1/1:1,9:10:21.07:272,21,0	1/1:1,21:22:63.15:762,63,0	1/1:5,23:28:78.15:933,78,0	1/1:0,13:13:39.13:504,39,0	0/0:31,0:31:93.21:0,93,1337	0/0:15,0:15:45.15:0,45,670	0/0:21,0:21:60.14:0,60,835	1/1:3,15:18:51.13:619,51,0	1/1:0,31:31:90.20:1118,90,0	1/1:3,19:22:66.17:822,66,0	1/1:0,9:9:24.08:310,24,0
chr10	41656607	.	AACACAC	A	14108.39	PASS	AB=0.646;AC=19;AF=0.339;AN=56;BaseQRankSum=13.189;DP=768;FS=9.564;HRun=0;HaplotypeScore=257.1778;InbreedingCoeff=0.2624;MQ=64.18;MQ0=0;MQRankSum=-17.126;QD=36.18;ReadPosRankSum=-3.387;VQSLOD=2.4609;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:22,22:43:21.15:909,0,21	0/0:7,0:7:21.07:0,21,749	0/0:34,0:28:37.61:0,38,1896	0/0:33,0:28:54.36:0,54,1834	0/0:35,0:35:99:0,105,3501	0/0:18,0:18:54.19:0,54,1913	0/0:24,0:24:66.18:0,66,2019	1/1:3,24:27:45.22:1367,45,0	0/0:33,0:33:99:0,99,3359	0/1:12,26:38:22.84:1829,0,23	1/1:9,12:21:41.98:714,42,0	0/0:27,0:27:79.15:0,79,2780	0/0:27,0:27:78.27:0,78,2731	0/0:18,0:18:54.17:0,54,1796	1/1:11,23:34:18.39:1262,18,0	0/1:16,28:44:70.68:1692,0,71	0/0:35,0:35:99:0,102,3504	1/1:4,7:11:4.94:498,5,0	0/1:6,7:13:27.24:527,0,27	1/1:12,28:40:82.23:1329,82,0	0/1:11,7:18:15.63:263,0,16	0/0:30,0:30:87.30:0,87,3056	0/0:29,0:29:84.27:0,84,2900	0/0:28,0:28:84.29:0,84,2760	0/1:9,15:24:19.25:758,0,19	0/1:15,20:35:99:1522,0,114	0/1:9,21:30:80.72:1141,0,81	0/1:7,4:11:82.86:299,0,83
chr10	41656629	.	GCACA	G	2681.61	PASS	AB=0.802;AC=14;AF=0.250;AN=56;BaseQRankSum=14.567;DP=875;FS=23.428;HRun=0;HaplotypeScore=317.1506;InbreedingCoeff=-0.3334;MQ=55.79;MQ0=1;MQRankSum=-12.227;QD=5.96;ReadPosRankSum=-0.121;VQSLOD=1.1733;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:37,16:53:99:319,0,932	0/0:9,0:9:24.08:0,24,629	0/0:42,0:33:90.27:0,90,2121	0/0:44,0:37:86.04:0,86,2115	0/0:31,0:31:87.30:0,87,2319	0/0:23,0:23:63.22:0,63,1614	0/0:28,0:28:78.25:0,78,1969	0/1:43,3:46:98.37:98,0,2591	0/0:36,0:36:99:0,99,2639	0/1:28,8:36:99:436,0,1658	0/1:22,7:29:54.87:55,0,529	0/0:29,0:29:87.30:0,87,2266	0/0:33,0:33:93.32:0,93,2424	0/0:21,0:21:57.20:0,57,1483	0/1:30,10:40:99:305,0,1083	0/1:32,11:43:99:268,0,1633	0/0:39,0:39:99:0,112,2916	0/1:7,2:9:37.67:38,0,382	0/1:15,2:16:92.57:93,0,721	0/1:34,7:41:97.81:98,0,912	0/1:15,8:23:36.59:37,0,433	0/0:29,0:29:81.26:0,81,2071	0/0:29,0:29:78.27:0,78,2037	0/0:32,0:32:90.28:0,90,2274	0/1:20,11:31:99:218,0,829	0/1:27,11:38:99:568,0,1397	0/1:26,8:34:99:164,0,1283	0/1:5,5:10:99:144,0,375
chr10	41657075	.	GTCTC	G	3474.51	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-5.328;DP=599;FS=2.925;HRun=0;HaplotypeScore=174.8206;InbreedingCoeff=0.9974;MQ=87.19;MQ0=0;MQRankSum=-1.029;QD=39.48;ReadPosRankSum=2.849;VQSLOD=4.1167;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:84.26:0,84,2030	0/0:7,0:7:18.05:0,18,429	0/0:23,0:23:60.19:0,60,1510	0/0:19,0:19:51.10:0,51,1035	0/0:23,0:23:63.09:0,63,1354	0/0:19,0:19:57.13:0,57,1420	0/0:15,0:15:45.11:0,45,1029	0/0:34,0:34:99:0,102,2367	0/0:19,0:19:54.19:0,54,1410	0/0:30,0:30:87.29:0,87,2179	0/0:13,0:13:39.13:0,39,981	1/1:0,24:24:48.08:836,48,0	0/0:19,0:19:57.18:0,57,1450	0/0:24,0:24:69.22:0,69,1802	0/0:17,0:17:51.18:0,51,1273	0/0:20,0:20:60.16:0,60,1365	1/1:2,28:30:69.17:1270,69,0	0/0:21,0:21:60.20:0,60,1447	0/0:19,0:19:48.15:0,48,1183	0/0:33,0:33:93.28:0,93,2221	0/0:18,0:18:51.14:0,51,1165	0/0:14,0:14:42.14:0,42,1102	1/1:0,19:19:51.09:893,51,0	1/1:2,13:15:27.51:475,28,0	0/0:25,0:25:75.23:0,75,1828	0/0:36,0:36:99:0,102,2603	0/0:23,0:23:66.21:0,66,1612	0/0:11,0:11:33.10:0,33,765
chr10	41657588	.	A	AGGATATC	5496.24	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-5.261;DP=754;FS=0.000;HRun=0;HaplotypeScore=197.9770;InbreedingCoeff=0.9974;MQ=63.43;MQ0=0;MQRankSum=-11.039;QD=74.27;ReadPosRankSum=-0.773;VQSLOD=4.7894;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:90.29:0,90,2106	0/0:15,0:15:39.13:0,39,974	0/0:17,0:16:27.97:0,28,666	0/0:15,0:15:39.10:0,39,877	1/1:13,25:39:69.19:2531,69,0	0/0:28,0:28:75.24:0,75,1772	0/0:20,0:20:48.15:0,48,1112	0/0:43,0:43:99:0,117,2504	0/0:29,0:29:81.26:0,81,1943	0/0:32,0:32:84.28:0,84,1970	0/0:18,0:18:48.15:0,48,1115	0/0:19,0:19:51.17:0,51,1175	0/0:37,0:37:99:0,105,2569	1/1:12,21:34:81.23:2965,81,0	0/0:29,0:29:75.26:0,75,1826	0/0:32,0:32:87.23:0,87,1913	0/0:28,0:28:81.21:0,81,1733	0/0:18,0:17:54.14:0,54,1228	0/0:22,0:22:57.16:0,57,1159	0/0:39,0:39:99:0,108,2493	0/0:32,0:32:87.26:0,87,2010	0/0:22,0:22:60.21:0,60,1380	0/0:34,0:34:93.31:0,93,2125	0/0:27,0:27:78.27:0,78,1924	0/0:21,0:21:57.20:0,57,1309	0/0:28,0:28:78.26:0,78,1851	0/0:32,0:31:87.28:0,87,2061	0/0:10,0:10:21.06:0,21,474
chr10	41657950	.	A	AG	20692.05	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-9.620;DP=615;FS=8.969;HRun=0;HaplotypeScore=60.5124;InbreedingCoeff=0.9997;MQ=70.12;MQ0=0;MQRankSum=-5.081;QD=43.29;ReadPosRankSum=2.339;VQSLOD=5.1280;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,36:36:93.32:1485,93,0	0/0:11,0:11:33.10:0,33,443	0/0:16,0:17:40.07:0,40,506	0/0:20,0:20:37.51:0,38,588	1/1:0,36:35:99:1650,105,0	0/0:19,0:19:57.19:0,57,796	0/0:18,0:18:45.15:0,45,628	1/1:0,36:36:99:1696,108,0	0/0:22,0:22:66.21:0,66,904	1/1:0,34:34:99:1582,102,0	1/1:1,25:26:66.23:1054,66,0	1/1:0,9:9:27.09:431,27,0	0/0:14,0:14:39.09:0,39,523	1/1:1,14:15:36.12:575,36,0	1/1:0,21:21:60.20:958,60,0	1/1:0,21:21:51.17:814,51,0	1/1:0,24:23:66.23:1054,66,0	1/1:3,13:16:42.14:670,42,0	1/1:0,27:27:69.18:1068,69,0	1/1:0,23:23:63.21:1006,63,0	1/1:0,15:15:39.13:623,39,0	0/0:14,0:14:42.13:0,42,569	1/1:1,20:21:51.17:815,51,0	1/1:0,15:15:36.12:574,36,0	1/1:0,30:30:78.27:1246,78,0	1/1:1,24:25:72.25:1141,72,0	1/1:0,34:34:99:1579,99,0	1/1:0,14:14:42.14:670,42,0
chr10	41658039	.	TAC	T	417.68	PASS	AB=0.996;AC=17;AF=0.304;AN=56;BaseQRankSum=3.700;DP=504;FS=0.791;HRun=0;HaplotypeScore=114.2077;InbreedingCoeff=0.2231;MQ=62.86;MQ0=6;MQRankSum=-0.209;QD=1.91;ReadPosRankSum=1.925;VQSLOD=2.1229;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:21,0:19:12.91:13,0,58	0/0:9,0:9:12.36:0,12,238	0/0:19,0:17:2.90:0,3,16	0/0:20,0:11:5.93:0,6,51	0/0:22,0:26:7.10:0,7,129	0/0:20,0:21:9.26:0,9,505	0/0:12,0:12:6.99:0,7,157	0/0:17,0:17:4.39:0,4,24	0/0:17,0:16:18.06:0,18,265	1/1:16,2:17:14.71:125,15,0	1/1:10,1:11:4.79:57,5,0	0/1:13,0:12:10.02:10,0,85	0/1:17,0:16:6.71:7,0,217	0/0:14,0:13:5.99:0,6,47	1/1:14,2:16:14.85:131,15,0	0/1:24,0:24:7.97:8,0,30	0/1:32,0:32:36.92:37,0,47	0/0:11,1:12:2.96:0,3,19	0/1:9,0:9:2.69:3,0,18	0/0:18,0:18:7.99:0,8,49	0/0:21,0:24:19.19:0,19,200	0/0:20,0:21:3.07:0,3,405	0/1:25,0:25:9.36:9,0,200	0/0:26,0:26:17.87:0,18,209	1/1:15,2:17:17.96:166,18,0	0/0:23,0:22:4.79:0,5,47	1/1:15,0:13:2.80:13,3,0	0/0:6,0:6:4.33:0,4,11
chr10	41658061	.	CACACACACACACACACACAT	C	636.41	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=1.986;DP=575;FS=33.755;HRun=0;HaplotypeScore=268.8322;InbreedingCoeff=0.0747;MQ=47.27;MQ0=32;MQRankSum=-0.662;QD=3.83;ReadPosRankSum=-3.863;VQSLOD=0.9425;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:21,0:19:1.30:203,0,1	0/0:11,0:10:30.09:0,30,1679	0/0:7,0:5:2.94:0,3,18	0/0:12,0:6:11.63:0,12,68	0/0:24,0:24:33.04:0,33,1414	0/0:31,0:30:71.96:0,72,3587	0/0:20,0:19:48.28:0,48,1576	0/0:25,0:18:33.96:0,34,243	0/0:20,0:18:42.10:0,42,2134	0/1:17,0:14:91.70:92,0,166	0/1:25,0:23:17.64:18,0,44	0/0:15,0:13:21.04:0,21,443	0/0:22,0:20:48.57:0,49,2152	0/0:19,0:19:27.53:0,28,851	0/1:14,0:13:55.09:96,0,55	1/1:8,15:23:5.80:257,6,0	0/1:33,0:31:20.33:20,0,1196	0/1:14,0:12:43.99:44,0,90	0/0:14,0:12:6.33:0,6,353	0/0:24,0:23:30:0,30,447	0/0:33,0:27:19.03:0,19,616	0/0:25,0:25:62.75:0,63,2987	0/0:24,0:24:32.87:0,33,1163	0/0:32,0:30:10.84:0,11,1348	0/1:19,0:19:45.29:45,0,47	0/0:29,0:26:65.17:0,65,978	0/0:14,0:13:6.81:0,7,40	0/0:8,0:7:11.37:0,11,140
chr10	41658065	.	CACACACACACACACAT	C	1811.69	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=1.269;DP=583;FS=17.095;HRun=0;HaplotypeScore=237.5038;InbreedingCoeff=0.2283;MQ=47.26;MQ0=35;MQRankSum=-4.587;QD=5.70;ReadPosRankSum=-5.226;VQSLOD=0.2243;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:20,0:17:31.58:61,0,32	0/0:12,0:11:24.33:0,24,1404	0/1:8,0:5:0.90:1,0,11	0/0:11,0:5:5.93:0,6,51	0/0:25,0:25:32.90:0,33,1051	0/0:32,0:31:59.78:0,60,2981	0/0:20,0:19:48.37:0,48,1293	0/1:26,0:19:13.15:13,0,87	0/0:22,0:20:42.09:0,42,1786	1/1:18,0:15:29.75:337,30,0	1/1:25,1:24:13.12:240,13,0	0/0:16,0:14:5.18:0,5,236	0/0:21,0:19:42.10:0,42,1644	0/0:18,0:18:20.56:0,21,575	1/1:13,1:13:21.04:421,21,0	1/1:22,0:22:5.93:162,6,0	0/1:32,0:30:45.94:46,0,841	0/1:14,0:12:2.26:73,0,2	0/0:13,0:11:5.09:0,5,121	0/0:24,0:23:1.85:0,2,111	0/1:35,0:28:89.18:89,0,131	0/0:28,0:28:68.72:0,69,2625	0/0:23,0:23:0.22:0,0,821	0/1:30,0:28:14.96:15,0,1006	1/1:16,3:19:26.83:393,27,0	0/1:30,0:27:67.20:67,0,252	1/1:15,0:14:2.06:36,2,0	0/1:9,0:8:20.66:34,0,21
chr10	41658079	.	CAT	C	3476.28	PASS	AB=0.990;AC=33;AF=0.589;AN=56;BaseQRankSum=7.296;DP=613;FS=0.391;HRun=0;HaplotypeScore=132.3528;InbreedingCoeff=0.2191;MQ=46.85;MQ0=39;MQRankSum=-3.403;QD=7.38;ReadPosRankSum=-5.222;VQSLOD=2.2824;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:16,1:15:24.20:111,0,24	0/0:12,0:11:6.95:0,7,315	0/1:16,0:9:6.35:6,0,54	0/0:24,0:7:14.74:0,15,108	0/1:21,0:21:0.47:0,0,262	0/0:32,0:31:62.67:0,63,871	0/0:24,0:23:26.50:0,27,370	1/1:9,22:24:64.41:465,64,0	0/0:21,0:19:47.99:0,48,557	1/1:19,0:16:43.86:335,44,0	1/1:26,0:24:21.76:150,22,0	0/1:15,1:14:22.76:90,0,23	0/1:21,0:19:22.15:22,0,300	0/1:17,0:17:59.88:60,0,89	1/1:15,0:14:25.14:175,25,0	0/1:17,0:17:11.86:12,0,14	1/1:34,1:33:39.89:315,40,0	1/1:12,0:10:13.71:90,14,0	0/1:20,0:15:7.38:186,0,7	1/1:23,0:22:26.35:227,26,0	0/1:36,0:28:54.57:206,0,55	0/0:29,0:29:55.07:0,55,687	0/1:24,0:24:67.80:90,0,68	0/1:31,0:29:81.74:125,0,82	1/1:21,0:21:19.91:109,20,0	1/1:29,0:26:71.62:537,72,0	1/1:14,0:14:2.96:19,3,0	1/1:10,0:9:20.77:146,21,0
chr10	41658818	.	AC	A	1251.85	PASS	AB=0.880;AC=33;AF=0.589;AN=56;BaseQRankSum=4.472;DP=416;FS=4.286;HRun=11;HaplotypeScore=67.4563;InbreedingCoeff=0.4556;MQ=62.69;MQ0=24;MQRankSum=0.544;QD=4.20;ReadPosRankSum=4.111;VQSLOD=0.5875;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:14,11:21:1.27:42,1,0	0/1:8,1:8:12.63:13,0,76	0/0:24,0:13:17.57:0,18,133	0/1:20,0:12:2.35:2,0,95	1/1:15,0:21:4.82:29,5,0	0/1:13,1:13:15.63:16,0,48	0/0:18,2:20:8.36:0,8,259	1/1:12,10:21:25.30:138,25,0	0/0:10,0:10:11.98:0,12,115	1/1:8,7:14:16.98:126,17,0	0/0:7,2:9:0:0,0,0	0/0:11,1:11:6:0,6,57	0/0:8,0:8:6:0,6,51	0/1:14,0:16:8.64:17,0,9	1/1:5,6:10:8.95:74,9,0	1/1:1,14:16:23.32:179,23,0	1/1:12,9:21:26.85:221,27,0	0/1:3,2:5:1.93:19,0,2	1/1:14,1:15:14.61:124,15,0	1/1:14,0:14:1.47:19,1,0	1/1:12,3:11:2.87:15,3,0	0/0:9,0:9:6:0,6,57	0/0:4,0:4:3.01:0,3,31	0/0:20,0:19:11.04:0,11,127	1/1:2,8:10:17.96:146,18,0	1/1:15,0:14:15.49:70,15,0	1/1:18,2:16:20.86:124,21,0	1/1:3,7:7:8.74:55,9,0
chr10	41658826	.	C	CT	1560.22	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=2.577;DP=366;FS=1.895;HRun=0;HaplotypeScore=66.9363;InbreedingCoeff=0.8487;MQ=51.74;MQ0=32;MQRankSum=-0.316;QD=12.29;ReadPosRankSum=4.938;VQSLOD=4.3397;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:16,1:12:8.06:69,8,0	0/0:8,0:7:20.92:0,21,196	0/0:20,0:7:21.02:0,21,236	0/0:15,0:7:20.27:0,20,204	0/0:28,0:26:52.47:0,52,357	0/0:7,0:6:17.96:0,18,165	0/0:21,0:19:47.99:0,48,499	1/1:14,2:16:15.42:288,15,0	0/0:6,0:6:18.02:0,18,201	0/0:13,0:12:23.54:0,24,153	0/0:7,0:7:5.06:0,5,70	0/0:11,0:10:14.61:0,15,127	0/0:9,0:9:7.68:0,8,96	0/0:13,0:12:35.04:0,35,243	0/0:11,0:10:20.85:0,21,160	1/1:15,0:15:5.23:47,5,0	0/0:22,0:21:53.19:0,53,360	0/0:5,0:5:11.91:0,12,89	1/1:2,12:13:38.68:414,39,0	1/1:2,9:10:11.98:132,12,0	1/1:3,10:9:2.84:14,3,0	0/0:9,0:9:20.93:0,21,183	0/0:5,0:5:3.01:0,3,34	0/0:20,0:16:24.02:0,24,220	0/0:9,0:9:12.95:0,13,89	1/1:0,12:11:33.11:415,33,0	1/1:3,17:16:31.23:323,31,0	1/1:8,0:5:8.74:54,9,0
chr10	41658838	.	TCACACA	T	941.17	PASS	AB=0.545;AC=11;AF=0.204;AN=54;BaseQRankSum=5.380;DP=439;FS=3.004;HRun=0;HaplotypeScore=115.8426;InbreedingCoeff=0.7336;MQ=44.62;MQ0=23;MQRankSum=-3.399;QD=13.26;ReadPosRankSum=3.404;VQSLOD=2.6894;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:21:11.78:0,12,256	0/0:10,0:9:17.78:0,18,460	0/0:21,0:8:6.02:0,6,132	./.	1/1:10,14:22:18.05:319,18,0	0/0:16,0:15:23.59:0,24,728	0/0:19,0:17:30.47:0,30,904	0/0:23,0:17:16.58:0,17,242	0/0:13,0:13:26.64:0,27,418	0/0:19,0:18:24.08:0,24,525	0/0:10,0:11:6.49:0,6,110	1/1:5,0:7:9.03:136,9,0	0/0:12,0:12:13.10:0,13,270	1/1:6,4:9:18.05:332,18,0	0/0:13,0:12:6.02:0,6,150	0/0:20,0:21:15.05:0,15,327	1/1:7,0:13:16.61:221,17,0	0/0:15,0:14:29.11:0,29,448	0/0:16,0:15:22.32:0,22,377	0/0:21,0:21:6.23:0,6,144	0/0:9,0:6:0.47:0,0,1	0/0:17,0:17:26.59:0,27,451	0/1:1,0:6:0:0,0,0	1/1:8,0:6:6.02:88,6,0	0/0:18,0:17:3.48:0,3,73	0/0:26,0:25:51.15:0,51,964	0/0:24,0:19:18.04:0,18,273	0/0:2,0:2:3.01:0,3,69
chr10	41661839	.	TG	T	4365.04	PASS	AB=0.922;AC=20;AF=0.357;AN=56;BaseQRankSum=-5.544;DP=614;FS=7.951;HRun=7;HaplotypeScore=127.5631;InbreedingCoeff=0.3529;MQ=66.52;MQ0=2;MQRankSum=-1.677;QD=13.11;ReadPosRankSum=-1.650;VQSLOD=3.1359;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:32,1:33:76.21:76,0,127	0/0:7,0:7:21.07:0,21,262	0/0:28,0:24:54.08:0,54,627	0/0:19,0:17:42.09:0,42,468	1/1:2,23:25:66.14:671,66,0	0/0:23,0:23:63.19:0,63,778	0/0:18,0:18:54.17:0,54,676	0/1:24,3:27:99:100,0,108	0/0:23,0:23:66.21:0,66,830	0/1:21,1:23:23.10:23,0,138	0/0:13,0:13:24.82:0,25,118	1/1:4,29:32:81.18:825,81,0	0/0:22,0:22:63.18:0,63,776	1/1:1,20:21:60.14:612,60,0	0/1:16,2:18:52.75:53,0,55	0/1:21,1:22:19.79:20,0,124	1/1:1,26:27:75.17:764,75,0	0/1:15,2:16:59.98:77,0,60	0/1:18,3:21:68.60:69,0,92	0/0:21,1:23:14.63:0,15,158	0/0:34,2:36:3.43:0,3,192	0/0:24,0:24:60.19:0,60,750	1/1:6,20:26:59.87:611,60,0	1/1:1,15:16:42.09:428,42,0	0/0:16,1:17:25.37:0,25,130	0/1:21,2:24:36.16:36,0,139	0/0:16,0:16:13.89:0,14,86	0/0:10,1:11:21.49:0,21,88
chr10	41661840	.	G	GT	6201.12	PASS	AB=0.864;AC=29;AF=0.518;AN=56;BaseQRankSum=12.607;DP=617;FS=2.150;HRun=1;HaplotypeScore=120.6488;InbreedingCoeff=0.7590;MQ=66.50;MQ0=2;MQRankSum=-4.360;QD=17.92;ReadPosRankSum=0.599;VQSLOD=5.1368;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,19:32:56.26:646,56,0	0/0:7,0:7:21.07:0,21,284	0/0:30,0:25:57.64:0,58,704	0/0:18,0:16:45.04:0,45,513	0/0:25,0:25:1.56:0,2,174	0/0:23,0:23:69.19:0,69,906	0/0:18,0:18:54.18:0,54,742	1/1:20,7:27:35.96:405,36,0	0/0:23,0:23:69.22:0,69,937	1/1:8,16:24:39.29:592,39,0	0/1:4,9:13:5.69:208,0,6	0/0:32,1:32:10.60:0,11,202	0/0:23,0:23:66.16:0,66,870	0/0:22,0:22:20.73:0,21,156	1/1:12,7:19:22.41:295,22,0	1/1:6,16:22:40.67:515,41,0	0/1:27,0:27:26.90:27,0,144	1/1:5,12:16:45.13:412,45,0	1/1:10,11:21:33.54:434,34,0	1/1:8,15:23:27.32:502,27,0	1/1:13,23:36:64.67:703,65,0	0/0:24,0:24:72.12:0,72,918	0/0:25,0:25:26.59:0,27,203	0/1:16,0:16:23.18:23,0,89	1/1:5,12:17:25.81:399,26,0	1/1:12,12:24:12.09:445,12,0	1/1:6,11:17:35.35:338,35,0	1/1:2,9:11:27.02:257,27,0
chr10	41661843	.	G	GGT	7675.23	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=13.141;DP=620;FS=5.828;HRun=0;HaplotypeScore=129.9521;InbreedingCoeff=0.9912;MQ=69.35;MQ0=2;MQRankSum=-2.527;QD=25.33;ReadPosRankSum=0.029;VQSLOD=5.7019;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,19:34:49.58:740,50,0	0/0:7,0:7:21.07:0,21,316	0/0:32,0:26:66.04:0,66,831	0/0:23,0:21:44.93:0,45,589	0/0:24,0:24:63.86:0,64,421	0/0:23,0:23:69.20:0,69,981	0/0:21,0:21:60.18:0,60,863	1/1:10,7:26:60.24:508,60,0	0/0:23,0:23:69.22:0,69,1022	1/1:6,15:26:56.17:778,56,0	1/1:1,9:13:10.52:271,11,0	0/0:33,0:32:83.11:0,83,563	0/0:23,0:23:66.20:0,66,954	0/0:23,0:23:64.18:0,64,432	1/1:4,7:16:37.22:336,37,0	1/1:1,16:21:53.50:639,54,0	0/0:26,0:26:74.18:0,74,496	1/1:6,12:17:25.33:476,25,0	1/1:6,11:22:55.23:570,55,0	1/1:2,15:22:56.48:643,56,0	1/1:5,23:38:87.52:975,88,0	0/0:21,0:21:63.17:0,63,912	0/0:23,0:23:58.89:0,59,393	0/0:15,0:15:41.54:0,42,277	1/1:2,12:17:39.04:497,39,0	1/1:6,12:23:44.93:600,45,0	1/1:2,10:16:15.65:338,16,0	1/1:2,9:11:24.07:307,24,0
chr10	41664103	.	CTTT	C	2431.78	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=3.757;DP=280;FS=14.637;HRun=13;HaplotypeScore=73.2584;InbreedingCoeff=0.7660;MQ=61.35;MQ0=2;MQRankSum=-4.517;QD=16.21;ReadPosRankSum=4.019;VQSLOD=0.7775;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,7:13:13.46:181,13,0	0/0:6,0:6:12.01:0,12,187	0/0:22,0:16:24.43:0,24,386	0/0:13,0:9:12.98:0,13,251	1/1:4,4:7:2.29:35,2,0	0/0:10,0:11:33.06:0,33,465	0/0:16,0:16:46.71:0,47,817	1/1:6,11:17:42.08:488,42,0	0/0:13,0:14:27.09:0,27,400	1/1:3,5:8:15.01:182,15,0	0/0:4,2:5:1.77:0,2,4	1/1:3,9:13:14.37:213,14,0	0/0:17,0:17:45.14:0,45,770	1/1:1,5:6:5.97:73,6,0	1/1:5,13:18:17.84:245,18,0	1/1:0,6:6:11.96:146,12,0	0/0:3,0:9:7.12:0,7,17	1/1:0,5:5:12.04:146,12,0	1/1:4,3:7:5.97:73,6,0	1/1:2,4:6:5.94:73,6,0	1/1:1,1:2:2.99:36,3,0	0/0:9,0:9:27.06:0,27,441	1/1:3,7:10:10.38:142,10,0	1/1:0,14:15:22.36:267,22,0	0/0:2,2:4:0:0,0,0	1/1:3,6:9:18.02:219,18,0	1/1:2,4:6:5.95:73,6,0	1/1:0,1:1:3.01:36,3,0
chr10	41664363	.	GA	G	12587.24	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=17.330;DP=629;FS=13.739;HRun=1;HaplotypeScore=95.5772;InbreedingCoeff=0.9833;MQ=56.60;MQ0=15;MQRankSum=-1.379;QD=38.03;ReadPosRankSum=1.075;VQSLOD=3.7963;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,34:36:97.85:1346,98,0	0/0:17,0:16:45.15:0,45,719	0/0:17,0:6:18.06:0,18,286	0/0:27,0:9:21.05:0,21,307	1/1:0,23:22:63.21:880,63,0	0/0:27,0:27:78.27:0,78,1247	0/0:38,0:38:99:0,108,1701	1/1:2,24:21:60.18:820,60,0	0/0:24,0:24:72.23:0,72,1120	1/1:0,24:24:72.20:984,72,0	1/1:0,18:18:51.17:712,51,0	0/0:37,0:37:99:0,111,1749	0/0:26,0:26:78.25:0,78,1224	1/1:0,24:24:66.22:919,66,0	1/1:0,17:17:48.16:671,48,0	1/1:0,20:20:54.18:755,54,0	0/0:25,0:25:72.23:0,72,1127	1/1:3,33:36:48.40:1245,48,0	1/1:2,13:12:36.12:503,36,0	1/1:0,9:9:27.09:378,27,0	1/1:2,27:29:87.28:1195,87,0	0/0:23,0:23:66.23:0,66,1055	0/0:14,0:14:33.11:0,33,527	0/0:23,0:23:69.24:0,69,1103	1/1:0,8:8:24.08:335,24,0	1/1:0,22:21:60.20:839,60,0	1/1:0,22:22:66.22:922,66,0	1/1:0,2:2:6.02:84,6,0
chr10	41664893	.	TA	T	4276.30	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=11.266;DP=579;FS=3.507;HRun=1;HaplotypeScore=54.6995;InbreedingCoeff=0.9922;MQ=67.91;MQ0=8;MQRankSum=-0.405;QD=38.18;ReadPosRankSum=1.664;VQSLOD=5.4464;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:66.23:0,66,1054	0/0:4,0:4:12.04:0,12,192	0/0:20,0:17:29.82:0,30,711	0/0:8,0:8:23.29:0,23,343	0/0:20,0:20:60.17:0,60,911	0/0:29,0:29:87.30:0,87,1387	0/0:17,0:17:51.16:0,51,791	0/0:34,0:30:87.27:0,87,1324	0/0:20,0:20:60.19:0,60,935	1/1:0,20:20:57.19:796,57,0	1/1:0,18:18:54.09:711,54,0	0/0:15,0:15:42.14:0,42,666	0/0:23,0:23:66.21:0,66,1027	0/0:25,0:25:72.25:0,72,1149	1/1:0,27:27:78.26:1091,78,0	0/0:21,0:21:63.21:0,63,1005	0/0:21,0:21:60.20:0,60,959	1/1:0,29:29:72.24:1007,72,0	0/0:31,0:24:72.24:0,72,1130	0/0:25,0:25:75.24:0,75,1175	0/0:19,0:19:54.12:0,54,810	0/0:17,0:17:51.17:0,51,814	0/0:15,0:15:45.14:0,45,696	0/0:27,0:27:78.20:0,78,1171	1/1:0,18:18:48.16:671,48,0	0/0:18,0:18:54.18:0,54,863	0/0:22,0:22:66.22:0,66,1049	0/0:14,0:14:39.13:0,39,620
chr10	41666504	.	A	AATTTT	5962.30	PASS	AB=0.631;AC=22;AF=0.393;AN=56;BaseQRankSum=12.446;DP=621;FS=9.097;HRun=0;HaplotypeScore=161.3384;InbreedingCoeff=-0.2407;MQ=71.44;MQ0=0;MQRankSum=-6.888;QD=14.13;ReadPosRankSum=1.335;VQSLOD=4.0119;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:9,0:28:33.45:814,0,33	0/0:15,0:15:45.13:0,45,904	0/1:17,0:19:11.91:12,0,347	0/0:6,0:6:11.95:0,12,142	0/0:5,0:32:79.26:0,79,700	0/0:32,0:32:90.20:0,90,1783	0/0:15,0:15:44.79:0,45,829	0/1:16,0:38:99:255,0,266	0/0:21,0:23:69.22:0,69,1418	0/1:13,1:29:99:902,0,115	1/1:8,0:17:9.55:566,10,0	1/1:1,0:12:0.67:44,1,0	0/0:30,0:31:87.17:0,87,1811	0/0:2,0:23:63.12:0,63,625	0/1:15,0:22:99:496,0,137	0/1:12,0:26:56.08:682,0,56	1/1:2,0:16:15.89:118,16,0	0/1:3,0:12:10.72:383,0,11	0/1:7,0:23:92.48:140,0,92	0/1:5,0:30:12.05:445,0,12	0/1:5,0:16:50.37:52,0,50	0/0:22,0:22:66.16:0,66,1250	0/1:4,0:20:42.17:113,0,42	0/1:3,0:17:49.57:50,0,57	0/1:11,0:21:99:358,0,150	0/1:6,0:33:99:253,0,101	0/1:8,0:29:66.06:222,0,66	0/1:5,0:14:41.44:58,0,41
chr10	41668168	.	T	TAC	12283.72	PASS	AB=0.700;AC=35;AF=0.625;AN=56;BaseQRankSum=6.202;DP=832;FS=1.776;HRun=0;HaplotypeScore=229.9488;InbreedingCoeff=0.9058;MQ=50.54;MQ0=3;MQRankSum=-9.852;QD=23.13;ReadPosRankSum=-2.996;VQSLOD=4.1622;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,22:30:60.20:956,60,0	0/0:14,0:14:39.12:0,39,487	0/0:42,0:27:44.92:0,45,507	0/0:34,0:25:35.21:0,35,531	1/1:21,0:36:31.39:313,31,0	1/1:7,0:25:48.03:435,48,0	1/1:3,2:32:54.02:507,54,0	1/1:15,22:36:62.45:1072,62,0	0/0:20,0:20:48.15:0,48,595	1/1:24,0:39:69.11:581,69,0	1/1:12,0:22:27.72:218,28,0	0/0:38,0:38:92.58:0,93,1132	0/0:29,0:29:69.22:0,69,859	1/1:20,0:32:48.39:338,48,0	1/1:19,1:40:77.41:597,77,0	1/1:11,24:35:87.29:1392,87,0	0/0:28,0:28:66.21:0,66,824	1/1:11,0:16:4.22:164,4,0	1/1:13,10:23:23.80:395,24,0	1/1:16,30:46:99:1718,111,0	1/1:11,15:25:25.71:844,26,0	0/0:37,0:38:64.60:0,65,1056	0/0:22,0:22:60.16:0,60,716	0/0:36,0:36:90.19:0,90,1073	1/1:13,0:29:49.66:417,50,0	1/1:3,17:21:63.20:991,63,0	1/1:10,17:27:66.22:1053,66,0	0/1:8,6:14:13.47:292,0,13
chr10	41668196	.	TACAC	T	16933.67	PASS	AB=0.634;AC=32;AF=0.571;AN=56;BaseQRankSum=4.298;DP=809;FS=1.377;HRun=0;HaplotypeScore=247.6065;InbreedingCoeff=0.8819;MQ=50.33;MQ0=11;MQRankSum=-9.867;QD=33.53;ReadPosRankSum=2.520;VQSLOD=4.5428;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,27:33:69.23:1149,69,0	0/0:13,0:13:36.12:0,36,874	0/0:38,0:24:54.18:0,54,1213	0/0:38,0:29:64.57:0,65,1290	0/0:11,0:31:51.06:0,51,319	0/0:24,0:25:53.97:0,54,1257	0/0:29,0:29:63.19:0,63,1451	1/1:19,25:42:72.19:1122,72,0	0/0:19,0:20:56.81:0,57,1263	1/1:7,35:42:99:1734,104,0	1/1:7,16:23:42.14:702,42,0	1/1:6,25:31:68.31:1166,68,0	0/0:22,0:23:62.98:0,63,1417	0/0:9,0:32:76.08:0,76,450	1/1:16,27:43:67.11:1105,67,0	1/1:8,29:37:81.27:1348,81,0	0/0:5,0:27:60.21:0,60,1052	0/1:4,10:16:72.47:412,0,72	1/1:13,12:18:33.04:499,33,0	1/1:7,31:38:89.93:1438,90,0	0/1:15,17:32:1.98:390,0,2	0/0:28,0:28:75.26:0,75,1821	1/1:2,20:22:60.12:981,60,0	1/1:4,23:27:60.20:1030,60,0	1/1:5,19:24:51.13:814,51,0	1/1:5,17:22:54.18:912,54,0	1/1:1,24:25:72.23:1207,72,0	1/1:0,21:21:54.18:926,54,0
chr10	41672186	.	TA	T	5781.16	PASS	AB=1.000;AC=51;AF=0.911;AN=56;BaseQRankSum=1.019;DP=467;FS=6.190;HRun=11;HaplotypeScore=98.9103;InbreedingCoeff=0.7354;MQ=73.37;MQ0=1;MQRankSum=-2.385;QD=13.54;ReadPosRankSum=2.006;VQSLOD=4.9010;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,16:20:41.65:338,42,0	0/0:9,0:9:24.05:0,24,249	0/0:31,0:26:9.48:0,9,217	0/1:23,0:6:17.69:18,0,23	1/1:2,18:20:47.93:394,48,0	1/1:1,0:19:34.63:102,35,0	1/1:4,0:19:22.39:66,22,0	1/1:4,23:27:68.83:554,69,0	1/1:2,0:12:20.37:60,20,0	1/1:4,16:20:31.06:350,31,0	1/1:2,13:15:41.93:343,42,0	1/1:1,0:11:20.37:60,20,0	1/1:1,0:12:22.41:66,22,0	1/1:2,12:14:35.94:295,36,0	1/1:5,11:16:26.91:215,27,0	1/1:4,13:17:32.94:271,33,0	1/1:3,0:21:32.42:95,32,0	1/1:1,16:17:47.93:394,48,0	1/1:7,12:19:35.62:290,36,0	1/1:5,20:25:56.89:467,57,0	1/1:0,7:7:20.98:172,21,0	1/1:3,0:11:14.25:42,14,0	1/1:2,0:14:18.33:54,18,0	1/1:1,0:13:23.65:69,24,0	1/1:3,13:16:35.92:295,36,0	1/1:2,12:14:35.64:282,36,0	1/1:2,16:18:44.94:369,45,0	1/1:2,5:7:14.93:119,15,0
chr10	41672634	.	A	AC	820.49	PASS	AB=1.000;AC=14;AF=0.250;AN=56;BaseQRankSum=-4.422;DP=164;FS=1.809;HRun=6;HaplotypeScore=18.4371;InbreedingCoeff=0.6042;MQ=78.28;MQ0=1;MQRankSum=-1.047;QD=18.23;ReadPosRankSum=1.064;VQSLOD=1.9471;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:27.06:0,27,275	0/0:1,0:1:3.01:0,3,31	0/0:10,0:6:1.17:0,1,113	0/0:12,0:10:14.97:0,15,134	0/0:7,0:7:15.03:0,15,153	1/1:0,3:3:6.02:75,6,0	1/1:0,8:8:21.07:264,21,0	0/0:5,0:5:6.01:0,6,61	0/1:2,0:2:2.53:3,0,18	0/0:11,0:11:24.04:0,24,244	0/0:3,0:3:9.02:0,9,92	1/1:1,7:8:18.06:226,18,0	0/0:3,0:3:9.02:0,9,91	0/0:6,0:6:15.03:0,15,153	0/0:4,0:4:6.01:0,6,61	0/0:7,0:7:17.93:0,18,168	1/1:1,10:11:21.07:264,21,0	0/0:9,0:9:18.02:0,18,175	0/0:6,0:6:18.03:0,18,178	0/0:2,0:2:3.01:0,3,31	0/0:5,0:5:2.47:0,2,110	0/1:6,0:6:0.69:1,0,78	1/1:1,2:3:6.02:75,6,0	1/1:2,2:4:6.02:75,6,0	0/0:2,0:2:5.96:0,6,43	0/0:7,0:7:18.04:0,18,183	0/0:4,0:4:12.03:0,12,122	0/0:5,0:5:12.02:0,12,121
chr10	41672913	.	CTTT	C	7596.06	PASS	AB=0.719;AC=32;AF=0.571;AN=56;BaseQRankSum=-11.006;DP=480;FS=0.000;HRun=13;HaplotypeScore=103.0624;InbreedingCoeff=0.8713;MQ=72.81;MQ0=0;MQRankSum=5.268;QD=24.91;ReadPosRankSum=5.284;VQSLOD=3.9598;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,18:19:45:528,45,0	0/0:4,0:4:12.04:0,12,198	0/0:11,0:11:11.41:0,11,74	0/1:16,0:17:10.99:11,0,122	1/1:1,17:18:32.98:401,33,0	0/0:11,0:22:57.17:0,57,898	0/0:8,0:20:54.18:0,54,864	1/1:10,16:27:51:602,51,0	0/0:11,0:20:51.17:0,51,790	1/1:4,17:21:51.09:620,51,0	1/1:0,6:6:18.06:219,18,0	0/0:10,0:23:63.21:0,63,985	0/0:10,0:21:54.18:0,54,847	0/1:3,25:29:2.43:664,0,2	1/1:6,14:20:36.04:438,36,0	1/1:0,17:18:48.08:565,48,0	0/0:7,0:21:48.16:0,48,741	1/1:1,10:11:30.08:365,30,0	1/1:4,17:22:49.44:604,49,0	1/1:0,7:7:18.06:219,18,0	1/1:2,16:18:33.03:401,33,0	0/0:7,0:12:33.11:0,33,524	0/0:2,0:7:18.06:0,18,260	0/0:8,0:13:24.04:0,24,325	1/1:0,9:9:24.07:292,24,0	1/1:5,15:23:46.29:539,46,0	1/1:1,27:28:72.20:876,72,0	1/1:0,10:11:19.39:253,19,0
chr10	41672937	.	GT	G	3087.97	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=8.229;DP=506;FS=8.734;HRun=7;HaplotypeScore=113.5392;InbreedingCoeff=0.9033;MQ=77.76;MQ0=0;MQRankSum=-5.549;QD=19.30;ReadPosRankSum=-1.432;VQSLOD=2.0999;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:63.19:0,63,773	0/0:3,0:3:9.03:0,9,113	0/0:30,0:27:11.21:0,11,481	0/1:14,0:12:28.80:29,0,98	0/0:18,0:18:48.15:0,48,603	1/1:4,18:22:59.65:542,60,0	1/1:5,12:17:38.94:369,39,0	0/0:21,0:21:51.16:0,51,640	1/1:3,14:17:44.99:431,45,0	0/0:24,0:24:66.21:0,66,825	0/0:9,0:9:21.07:0,21,264	1/1:11,11:22:44.94:418,45,0	1/1:7,12:19:41.77:380,42,0	0/0:35,0:35:99:0,99,1229	0/0:19,0:19:51.16:0,51,641	0/0:19,0:19:48.15:0,48,603	1/1:8,14:22:47.99:455,48,0	0/0:16,0:16:48.15:0,48,601	0/0:26,0:26:66.15:0,66,794	0/0:8,0:8:18.06:0,18,226	0/0:16,0:16:42.09:0,42,510	1/1:2,7:9:26.94:249,27,0	1/1:0,8:8:21:201,21,0	1/1:3,7:10:23.98:229,24,0	0/0:12,0:12:33.11:0,33,414	0/0:25,0:25:69.22:0,69,867	0/0:32,0:32:90.29:0,90,1130	0/0:11,0:11:27.09:0,27,340
chr10	41672943	.	TTG	T	1847.88	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=8.830;DP=500;FS=11.547;HRun=0;HaplotypeScore=123.8504;InbreedingCoeff=0.9080;MQ=79.22;MQ0=0;MQRankSum=-4.099;QD=13.49;ReadPosRankSum=-0.203;VQSLOD=2.6298;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:66.21:0,66,1217	0/0:3,0:3:9.03:0,9,176	0/0:29,0:26:55.24:0,55,870	0/0:16,0:14:22.26:0,22,266	0/0:18,0:18:51.11:0,51,945	1/1:25,0:25:30.25:348,30,0	1/1:14,2:17:40.90:267,41,0	0/0:20,0:20:54.18:0,54,1003	1/1:14,1:15:41.08:225,41,0	0/0:27,0:27:78.25:0,78,1422	0/0:10,0:10:24.08:0,24,446	1/1:14,1:16:46.68:373,47,0	1/1:14,2:16:27.57:200,28,0	0/0:35,0:35:99:0,102,1909	0/0:18,0:18:54.17:0,54,1023	0/0:17,0:17:48.16:0,48,942	1/1:17,1:18:44.95:272,45,0	0/0:16,0:16:48.16:0,48,931	0/0:25,0:25:72.16:0,72,1237	0/0:6,0:6:18.06:0,18,353	0/0:16,0:16:45.09:0,45,799	1/1:9,2:11:24.90:170,25,0	0/1:11,0:11:12.45:49,0,12	1/1:7,1:8:22.73:153,23,0	0/0:13,0:13:36.06:0,36,658	0/0:25,0:25:75.24:0,75,1387	0/0:35,0:35:99:0,105,1890	0/0:11,0:11:27.09:0,27,530
chr10	41673058	.	AT	A	2997.71	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=9.473;DP=498;FS=4.212;HRun=8;HaplotypeScore=62.0097;InbreedingCoeff=0.9985;MQ=86.66;MQ0=0;MQRankSum=0.788;QD=22.37;ReadPosRankSum=4.809;VQSLOD=4.0482;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:69.19:0,69,820	0/0:14,0:14:36.08:0,36,416	0/0:24,0:22:47.51:0,48,545	0/0:25,0:25:40.62:0,41,507	0/0:28,0:28:81.16:0,81,936	1/1:2,19:21:51.08:492,51,0	1/1:0,8:8:21.03:203,21,0	0/0:22,0:22:54.15:0,54,631	1/1:1,14:15:30.05:290,30,0	0/0:28,0:28:81.24:0,81,967	0/0:24,0:24:69.21:0,69,829	1/1:1,19:20:54.09:521,54,0	1/1:2,12:14:36.06:347,36,0	0/0:18,0:18:54.12:0,54,635	0/0:13,0:13:27.08:0,27,326	0/0:11,0:11:30.07:0,30,341	1/1:1,19:20:48.08:464,48,0	0/0:17,0:17:51.16:0,51,616	0/0:23,0:23:57.11:0,57,655	0/0:16,0:16:45.14:0,45,540	0/0:13,0:13:33.09:0,33,387	1/1:0,10:10:24.03:232,24,0	1/1:0,13:13:35.75:347,36,0	1/1:2,11:13:33.05:318,33,0	0/0:19,0:19:57.17:0,57,688	0/0:17,0:17:36.09:0,36,422	0/0:13,0:13:36.11:0,36,430	0/0:13,0:13:36.11:0,36,434
chr10	41675217	.	T	TTC	10024.35	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-1.856;DP=704;FS=1.384;HRun=0;HaplotypeScore=89.6780;InbreedingCoeff=0.9996;MQ=97.91;MQ0=1;MQRankSum=-2.114;QD=44.55;ReadPosRankSum=3.631;VQSLOD=6.2648;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:59,0:59:99:0,178,2476	0/0:9,0:9:24.08:0,24,344	0/0:37,0:36:79.95:0,80,1072	0/0:40,0:38:62.99:0,63,1112	0/0:24,0:24:66.21:0,66,929	1/1:3,44:47:99:2090,114,0	1/1:1,22:23:57.20:1045,57,0	0/0:34,0:34:99:0,102,1460	1/1:2,25:27:66.23:1210,66,0	0/0:21,0:21:60.20:0,60,845	0/0:17,0:17:51.17:0,51,731	1/1:1,18:19:48.16:880,48,0	1/1:3,19:22:42.14:770,42,0	0/0:14,0:14:42.12:0,42,583	0/0:30,0:30:81.27:0,81,1161	0/0:27,0:27:81.26:0,81,1141	1/1:0,19:19:51.17:921,51,0	0/0:23,0:23:60.20:0,60,859	0/0:13,0:13:39.13:0,39,557	0/0:19,0:19:48.11:0,48,648	0/0:21,0:21:63.19:0,63,883	1/1:3,25:28:68.90:1204,69,0	1/1:0,20:22:60.20:1081,60,0	1/1:1,17:18:45.15:825,45,0	0/0:26,0:26:78.22:0,78,1094	0/0:20,0:20:51.17:0,51,731	0/0:32,0:32:96.28:0,96,1351	0/0:13,0:13:39.13:0,39,559
chr10	41675466	.	G	GCACA	4877.69	PASS	AB=0.911;AC=29;AF=0.558;AN=52;BaseQRankSum=-4.737;DP=739;FS=38.272;HRun=0;HaplotypeScore=186.1315;InbreedingCoeff=0.2196;MQ=53.89;MQ0=16;MQRankSum=-0.151;QD=8.62;ReadPosRankSum=-1.835;VQSLOD=2.7093;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:44,0:42:25.30:281,25,0	0/0:10,0:10:12.50:0,13,146	./.	./.	0/1:16,0:25:4.90:5,0,122	0/1:14,1:20:59.01:59,0,88	0/1:32,0:33:72.79:73,0,108	0/1:28,0:24:1.12:1,0,16	0/1:22,0:26:16.56:92,0,17	1/1:20,2:20:22.32:282,22,0	1/1:14,4:18:8.97:211,9,0	1/1:20,1:21:17.59:303,18,0	0/1:21,0:24:72.44:104,0,72	0/0:18,0:29:15.02:0,15,139	0/1:17,9:27:27.48:400,0,27	1/1:23,0:23:19.77:234,20,0	1/1:24,10:33:16.03:1049,16,0	1/1:20,4:27:17.11:576,17,0	0/0:18,0:18:8.92:0,9,91	0/0:26,0:30:13.37:0,13,132	0/1:35,0:32:1.11:1,0,172	0/1:31,0:30:85.45:85,0,90	1/1:18,0:18:13.98:264,14,0	1/1:38,3:40:21.23:434,21,0	0/1:23,2:27:60.47:421,0,60	0/1:21,0:23:2.71:3,0,85	0/0:11,0:18:24.50:0,24,224	0/0:9,0:11:8.85:0,9,70
chr10	41675552	.	A	AACACAACAC	6586.66	PASS	AB=0.965;AC=21;AF=0.375;AN=56;BaseQRankSum=3.314;DP=1091;FS=45.493;HRun=0;HaplotypeScore=339.0544;InbreedingCoeff=0.4327;MQ=49.28;MQ0=31;MQRankSum=-9.482;QD=12.00;ReadPosRankSum=-6.081;VQSLOD=1.8811;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,105,2409	0/0:11,0:10:11.95:0,12,312	0/0:78,0:31:11.44:0,11,145	0/0:90,0:32:18.06:0,18,311	0/0:18,0:17:36.12:0,36,965	0/1:21,0:22:25.06:25,0,540	0/1:56,0:55:28.03:28,0,1959	1/1:43,0:37:21.06:409,21,0	0/0:38,0:38:9.43:0,9,1553	0/0:33,0:31:48.15:0,48,1223	0/0:16,0:16:27.03:0,27,617	0/1:39,0:39:99:104,0,1145	0/1:42,0:39:17.96:18,0,1134	0/0:31,0:31:66.21:0,66,1620	0/0:28,0:28:54.18:0,54,1306	0/0:36,0:35:87.27:0,87,2237	0/1:34,0:36:43.46:43,0,1537	0/0:41,0:40:99:0,102,2673	1/1:18,0:14:18.53:509,19,0	1/1:29,7:35:73.13:2186,73,0	1/1:42,36:76:9.12:325,9,0	0/1:36,0:34:78.55:79,0,862	0/0:39,0:37:42.36:0,42,1675	0/1:60,0:63:76.02:76,0,1586	0/0:30,0:30:60.19:0,60,1584	1/1:18,18:32:54.18:1617,54,0	1/1:6,8:15:15.05:683,15,0	1/1:1,11:14:12.04:486,12,0
chr10	41675619	.	ACCAT	A	4001.33	PASS	AB=0.794;AC=9;AF=0.161;AN=56;BaseQRankSum=11.069;DP=932;FS=29.084;HRun=0;HaplotypeScore=259.5903;InbreedingCoeff=-0.2055;MQ=48.09;MQ0=43;MQRankSum=-9.021;QD=12.99;ReadPosRankSum=-3.633;VQSLOD=1.5357;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:56:99:0,141,3401	0/0:6,0:6:18.06:0,18,520	0/0:59,0:14:28.17:0,28,359	0/0:56,0:11:1.60:0,2,210	0/0:22,0:20:57.20:0,57,1556	0/1:11,7:17:99:337,0,352	0/1:23,3:26:99:240,0,935	0/0:39,0:32:87.20:0,87,2077	0/1:28,5:31:99:463,0,798	0/0:31,0:28:75.21:0,75,1847	0/0:13,0:12:30.10:0,30,780	0/1:34,8:40:99:482,0,1053	0/1:25,7:32:99:482,0,806	0/0:38,0:36:99:0,102,2709	0/0:26,0:26:75.24:0,75,2038	0/0:21,1:22:8.94:0,9,1472	0/1:16,2:22:99:314,0,669	0/0:35,0:35:99:0,105,2622	0/0:34,0:23:57.84:0,58,1369	0/0:27,0:26:60.20:0,60,1691	0/0:78,0:74:85.79:0,86,2575	0/1:30,15:44:99:765,0,491	0/1:24,16:38:99:687,0,501	0/1:36,3:41:99:231,0,707	0/0:22,0:22:63.13:0,63,1405	0/0:30,0:25:72.17:0,72,1876	0/0:11,0:10:24.08:0,24,628	0/0:14,0:13:24.02:0,24,564
chr10	41675702	.	A	AC	4751.65	PASS	AB=0.806;AC=22;AF=0.393;AN=56;BaseQRankSum=1.359;DP=1045;FS=13.350;HRun=1;HaplotypeScore=264.1972;InbreedingCoeff=-0.6430;MQ=38.85;MQ0=82;MQRankSum=2.238;QD=6.52;ReadPosRankSum=-2.387;VQSLOD=-0.5125;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:48,3:48:19.08:19,0,342	0/0:6,0:8:20.20:0,20,254	0/0:81,0:9:26.82:0,27,332	0/0:91,0:13:31.91:0,32,402	0/1:24,13:35:99:114,0,274	0/1:28,3:31:15.78:16,0,493	0/0:50,3:60:89.49:0,89,1281	0/1:38,16:46:99:463,0,702	0/0:34,0:27:21.14:0,21,400	0/1:29,8:32:99:390,0,489	0/1:8,13:19:99:267,0,110	0/0:30,8:32:28.93:0,29,300	0/1:36,0:31:91.09:91,0,512	0/1:19,10:29:99:177,0,363	0/1:13,9:21:99:233,0,178	0/1:19,14:30:99:486,0,335	0/1:31,7:36:99:150,0,475	0/1:13,10:20:99:321,0,286	0/1:47,6:35:99:372,0,315	0/1:26,4:25:99:203,0,140	0/1:49,7:50:99:219,0,706	0/1:33,0:29:75.94:76,0,374	0/1:27,5:30:37.42:37,0,451	0/1:30,4:32:11.43:11,0,271	0/1:14,7:20:99:313,0,169	0/1:13,13:23:99:443,0,140	0/1:11,9:18:99:313,0,106	0/1:3,1:3:38.94:39,0,56
chr10	41675714	.	C	CACACACACAT	11338.13	PASS	AB=0.911;AC=31;AF=0.554;AN=56;BaseQRankSum=0.667;DP=969;FS=0.866;HRun=0;HaplotypeScore=334.3256;InbreedingCoeff=-0.1623;MQ=41.62;MQ0=69;MQRankSum=0.687;QD=14.57;ReadPosRankSum=6.975;VQSLOD=2.5465;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:17,35:53:1.83:86,0,2	0/0:12,0:11:26.98:0,27,411	0/0:67,0:11:20.85:0,21,218	0/0:72,0:16:35.95:0,36,342	0/1:39,0:37:56.61:245,0,57	0/1:34,0:31:78.51:79,0,166	0/1:58,0:55:99:164,0,151	1/1:44,0:39:27.49:1130,27,0	0/1:25,0:19:13.63:49,0,14	0/1:28,0:28:21.10:886,0,21	0/1:18,0:21:21.87:435,0,22	0/0:34,0:30:13.85:0,14,89	0/1:31,0:28:41.48:136,0,41	0/1:28,0:29:2.52:504,0,3	1/1:18,0:22:14.11:605,14,0	1/1:27,0:25:47.32:1090,47,0	0/1:36,0:34:99:162,0,110	0/1:16,0:18:10.52:846,0,11	0/1:33,0:26:20.63:366,0,21	0/1:11,23:35:9.88:519,0,10	1/1:52,0:49:30.20:882,30,0	0/1:34,0:30:99:124,0,153	0/1:31,0:30:15.75:34,0,16	0/1:31,0:28:44.39:44,0,57	0/1:20,0:22:5.07:691,0,5	1/1:26,0:24:65.23:1047,65,0	1/1:21,0:20:42.09:1076,42,0	1/1:5,0:4:10.94:139,11,0
chr10	41675821	.	A	AT	3781.02	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-12.194;DP=697;FS=3.939;HRun=8;HaplotypeScore=89.5218;InbreedingCoeff=0.9990;MQ=77.40;MQ0=0;MQRankSum=2.481;QD=30.01;ReadPosRankSum=2.580;VQSLOD=3.1594;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:75.04:0,75,686	0/0:10,0:10:27.01:0,27,247	0/0:20,0:18:24.92:0,25,287	0/0:18,0:18:32.85:0,33,275	0/0:39,0:39:99:0,102,932	0/0:41,1:41:38.98:0,39,861	0/0:25,0:25:66.03:0,66,604	0/0:29,0:28:72.02:0,72,658	0/0:20,0:20:51.02:0,51,467	1/1:2,27:29:81.24:933,81,0	1/1:0,29:30:90.10:1016,90,0	0/0:27,0:27:78.04:0,78,713	0/0:14,0:14:42.02:0,42,384	0/0:28,0:28:81.04:0,81,740	1/1:4,16:20:39.12:450,39,0	0/0:21,0:21:63.01:0,63,568	0/0:39,0:40:99:0,107,967	1/1:0,13:13:30.09:346,30,0	0/0:25,0:25:62.99:0,63,566	0/0:36,0:36:99:0,102,933	0/0:11,0:11:30.02:0,30,274	0/0:27,0:26:69.02:0,69,630	0/0:36,0:36:96.04:0,96,878	0/0:14,0:14:42.02:0,42,384	1/1:2,32:34:90.27:1036,90,0	0/0:28,1:30:48.45:0,48,685	0/0:13,0:13:39.02:0,39,356	0/0:17,0:17:48.02:0,48,439
chr10	41676519	.	G	GCA	2227.59	PASS	AB=0.860;AC=36;AF=0.667;AN=54;BaseQRankSum=0.615;DP=702;FS=0.714;HRun=0;HaplotypeScore=156.5949;InbreedingCoeff=0.1337;MQ=58.87;MQ0=20;MQRankSum=-2.164;QD=3.73;ReadPosRankSum=-0.462;VQSLOD=2.6825;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:37,13:54:90.65:112,0,91	0/0:13,0:14:23.87:0,24,227	./.	0/1:50,0:28:0:0,0,0	0/0:6,1:16:1.25:0,1,4	1/1:27,0:27:2.86:43,3,0	0/1:19,1:25:0:0,0,0	1/1:25,0:21:5.81:44,6,0	0/0:9,0:9:5.81:0,6,32	1/1:19,0:20:21.10:161,21,0	1/1:26,0:27:3.01:43,3,0	0/1:25,5:29:28.97:256,0,29	0/1:17,0:17:19.53:20,0,47	1/1:17,0:19:4.62:32,5,0	1/1:21,0:27:3:26,3,0	0/1:11,5:20:31.02:101,0,31	0/1:40,4:43:51.92:338,0,52	1/1:29,0:29:20.62:152,21,0	0/0:13,0:12:2.59:0,3,10	1/1:16,0:16:10.56:52,11,0	1/1:30,0:30:8.62:95,9,0	0/0:17,0:18:2.78:0,3,16	1/1:12,5:17:1.39:41,1,0	0/1:31,8:38:19.08:328,0,19	1/1:15,0:18:3:26,3,0	1/1:21,0:29:29.67:361,30,0	1/1:19,0:19:14.75:118,15,0	1/1:5,0:10:3.47:26,3,0
chr10	41676560	.	CACAG	C	1439.84	PASS	AB=0.992;AC=17;AF=0.304;AN=56;BaseQRankSum=1.104;DP=744;FS=24.872;HRun=0;HaplotypeScore=180.2278;InbreedingCoeff=0.2085;MQ=48.86;MQ0=28;MQRankSum=0.293;QD=4.06;ReadPosRankSum=-4.302;VQSLOD=-0.0207;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:57:62.31:0,62,892	0/0:19,0:18:45.09:0,45,862	0/0:33,0:11:14.53:0,15,192	0/1:36,0:12:4.76:5,0,98	0/0:20,0:20:21.14:0,21,203	1/1:35,0:35:21.03:340,21,0	1/1:21,0:19:20.64:168,21,0	0/0:17,0:14:27.32:0,27,284	1/1:18,2:19:4.71:38,5,0	0/1:25,0:24:1.63:2,0,722	0/0:28,0:28:33.02:0,33,460	0/1:28,0:27:99:112,0,296	0/1:25,1:26:32.98:33,0,34	0/0:19,0:19:14.73:0,15,287	0/0:24,0:24:23.83:0,24,229	0/0:17,0:17:10.27:0,10,341	0/1:50,0:49:99:344,0,532	0/0:29,0:29:52.75:0,53,929	0/0:15,0:11:17.78:0,18,193	0/0:25,0:24:28.24:0,28,363	0/0:39,0:37:41.58:0,42,472	1/1:19,1:20:4.79:169,5,0	0/1:18,0:18:45.03:149,0,45	0/1:35,0:34:99:197,0,286	0/0:22,0:21:27.44:0,27,322	0/1:34,0:32:34.07:34,0,1033	0/0:25,0:24:15.66:0,16,574	0/1:6,0:6:19.61:20,0,23
chr10	41676562	.	CAG	C	2048.81	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=2.714;DP=732;FS=36.617;HRun=0;HaplotypeScore=160.5695;InbreedingCoeff=0.4385;MQ=48.77;MQ0=27;MQRankSum=-0.553;QD=5.35;ReadPosRankSum=-3.893;VQSLOD=0.6712;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:67.78:0,68,721	0/0:17,0:16:26.61:0,27,518	0/0:33,0:12:17.54:0,18,217	0/1:36,0:12:4.76:5,0,98	0/0:20,0:20:20.81:0,21,177	1/1:35,0:35:48.78:406,49,0	1/1:21,0:19:20.60:168,21,0	0/0:16,0:13:12.22:0,12,173	1/1:4,16:19:5.72:88,6,0	0/0:25,0:24:22.42:0,22,538	0/0:26,0:26:33:0,33,345	0/1:28,0:27:58.20:142,0,58	1/1:6,20:25:17.80:188,18,0	0/0:19,0:19:22.25:0,22,256	0/0:23,0:23:23.83:0,24,203	0/0:17,0:17:32.61:0,33,325	0/1:50,0:49:90.91:458,0,91	0/0:29,0:29:22.68:0,23,605	0/0:14,0:10:15.40:0,15,185	0/1:25,0:24:39.55:40,0,246	0/0:38,0:36:17.82:0,18,355	1/1:18,2:20:25.95:231,26,0	1/1:19,0:19:13.03:211,13,0	0/1:35,0:34:49.45:219,0,49	0/0:18,0:18:23.97:0,24,245	0/1:35,0:33:7.87:8,0,758	0/1:27,0:26:51.47:51,0,384	1/1:6,0:6:5.72:29,6,0
chr10	41676884	.	AT	A	6374.76	PASS	AB=0.833;AC=30;AF=0.536;AN=56;BaseQRankSum=1.680;DP=538;FS=4.112;HRun=10;HaplotypeScore=78.7302;InbreedingCoeff=0.7389;MQ=77.80;MQ0=1;MQRankSum=0.472;QD=18.48;ReadPosRankSum=-0.979;VQSLOD=5.1974;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,22:25:68.02:579,68,0	0/0:10,0:10:24.06:0,24,265	0/1:14,0:13:21.78:22,0,54	0/1:15,2:15:21.56:22,0,215	1/1:3,24:27:35.78:540,36,0	0/0:21,0:21:57.13:0,57,621	0/0:19,1:20:34.08:0,34,587	1/1:6,30:37:88.97:756,89,0	1/1:2,22:24:59.99:521,60,0	0/0:15,0:15:42.11:0,42,459	0/0:19,0:19:48.13:0,48,531	0/0:16,0:16:39.10:0,39,425	1/1:3,24:27:60.43:543,60,0	0/1:2,12:14:3.19:204,0,3	0/0:23,2:25:11.06:0,11,578	1/1:0,15:16:47.03:397,47,0	0/1:16,2:18:6.99:7,0,385	0/0:20,0:20:48.13:0,48,530	1/1:5,17:22:53.01:449,53,0	1/1:4,22:27:67.98:574,68,0	1/1:0,14:14:38.99:339,39,0	1/1:3,18:22:47.33:463,47,0	0/0:22,0:22:57.14:0,57,622	0/0:11,0:11:30.08:0,30,332	0/0:14,0:14:33.09:0,33,365	1/1:0,17:17:50.98:439,51,0	1/1:2,17:19:47.99:417,48,0	1/1:1,4:5:12:104,12,0
chr10	41677750	.	GGTGTGTGTGTGTGT	G	2825.02	PASS	AC=18;AF=0.346;AN=52;BaseQRankSum=4.942;DP=628;FS=1.586;HRun=0;HaplotypeScore=193.4237;InbreedingCoeff=0.7647;MQ=58.03;MQ0=48;MQRankSum=-3.130;QD=15.03;ReadPosRankSum=1.272;VQSLOD=2.6814;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:36:6.33:289,6,0	0/0:2,0:4:6.02:0,6,285	./.	0/0:67,0:19:6.02:0,6,92	0/0:11,0:14:15.05:0,15,709	0/0:11,0:16:17.94:0,18,304	0/0:15,0:20:15.84:0,16,203	0/0:29,0:27:0:0,0,0	0/0:19,0:19:5.83:0,6,169	0/0:13,0:15:36.12:0,36,1635	0/0:9,0:9:3.01:0,3,182	0/0:18,0:25:39.13:0,39,1222	1/1:19,0:17:18.06:585,18,0	0/0:19,0:23:24.55:0,25,1107	0/0:4,0:10:15.05:0,15,843	1/1:11,0:21:15.05:489,15,0	0/0:13,0:20:15.46:0,15,225	0/0:13,0:15:29.31:0,29,1174	1/1:12,1:13:3.01:118,3,0	1/1:15,6:19:8.63:275,9,0	1/1:20,6:25:6.02:215,6,0	./.	0/0:16,0:22:6.02:0,6,168	0/0:25,0:36:50.83:0,51,1735	0/0:20,0:22:15.05:0,15,752	1/1:13,8:21:19.21:549,19,0	1/1:12,6:18:9.33:250,9,0	1/1:3,5:8:6.02:235,6,0
chr10	41677755	.	GT	G	589.42	PASS	AB=0.935;AC=8;AF=0.143;AN=56;BaseQRankSum=8.457;DP=623;FS=0.000;HRun=1;HaplotypeScore=110.3148;InbreedingCoeff=0.5708;MQ=52.15;MQ0=52;MQRankSum=-7.436;QD=6.48;ReadPosRankSum=-1.946;VQSLOD=-0.3325;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,1:33:19.27:0,19,264	0/0:5,0:5:10.56:0,11,91	0/0:54,0:10:29.76:0,30,354	0/0:65,0:17:45.12:0,45,533	0/0:15,0:15:18.06:0,18,269	0/0:14,0:14:19:0,19,230	0/1:18,0:20:11.16:11,0,332	0/0:27,0:25:65.94:0,66,795	1/1:1,18:19:43.32:504,43,0	0/0:17,0:15:45.01:0,45,586	0/0:11,0:10:8.87:0,9,105	0/1:22,1:24:27.30:27,0,453	1/1:2,2:18:20.10:134,20,0	0/0:24,0:22:36.56:0,37,465	0/0:11,0:11:15.61:0,16,254	0/0:19,0:18:13.35:0,13,187	0/0:22,0:20:21.13:0,21,266	0/0:15,0:15:34.46:0,34,433	0/0:13,0:13:32.57:0,33,363	0/0:21,0:19:11.91:0,12,153	0/0:29,0:25:15.80:0,16,259	1/1:2,6:5:5.93:57,6,0	0/0:21,1:22:10.26:0,10,104	0/0:39,1:39:46.83:0,47,583	0/0:26,0:24:35.97:0,36,452	0/0:20,1:20:2.56:0,3,456	0/0:19,0:19:11.23:0,11,377	0/0:8,0:8:9.03:0,9,115
chr10	41677759	.	GT	G	318.20	PASS	AB=0.982;AC=10;AF=0.179;AN=56;BaseQRankSum=10.713;DP=630;FS=0.709;HRun=1;HaplotypeScore=111.0720;InbreedingCoeff=0.3008;MQ=46.43;MQ0=57;MQRankSum=-8.333;QD=2.27;ReadPosRankSum=1.017;VQSLOD=-0.6696;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:34:14.45:0,14,256	0/0:6,0:6:13.99:0,14,130	0/0:52,0:8:21.05:0,21,243	0/0:63,0:12:33:0,33,390	0/0:16,0:16:21.06:0,21,294	0/1:15,0:15:5.11:5,0,208	0/1:17,1:18:50.31:50,0,272	0/0:28,0:26:66.13:0,66,796	1/1:20,0:20:35.71:309,36,0	0/0:17,0:14:42.13:0,42,568	0/0:12,0:11:8.87:0,9,105	0/0:25,0:25:51.09:0,51,583	1/1:19,1:18:16.07:70,16,0	0/0:23,0:21:33.52:0,34,440	0/0:11,0:11:17.31:0,17,271	0/1:20,0:19:3.99:4,0,169	0/1:23,0:21:6.30:6,0,243	0/0:16,0:16:35.36:0,35,421	0/0:13,0:13:32.14:0,32,416	0/0:23,0:19:11.21:0,11,152	0/0:28,1:24:10.28:0,10,212	0/1:6,0:3:9.34:9,0,9	0/0:22,0:22:7.27:0,7,80	0/0:44,0:43:62.72:0,63,740	0/0:26,0:24:35.98:0,36,465	0/0:20,0:19:39.67:0,40,505	0/1:17,1:18:6.59:7,0,326	0/0:8,0:8:7.10:0,7,111
chr10	41677761	.	GT	G	400.64	PASS	AB=1.000;AC=6;AF=0.107;AN=56;BaseQRankSum=11.246;DP=625;FS=2.224;HRun=1;HaplotypeScore=109.9950;InbreedingCoeff=0.4806;MQ=45.05;MQ0=58;MQRankSum=-8.789;QD=6.16;ReadPosRankSum=1.369;VQSLOD=0.7255;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,1:34:7.36:0,7,244	0/0:6,0:6:14.35:0,14,130	0/0:52,0:6:18.06:0,18,225	0/0:64,0:12:36.10:0,36,443	0/0:16,0:16:21.07:0,21,307	0/0:15,0:15:20.57:0,21,241	0/0:18,0:18:26.75:0,27,295	0/0:21,2:21:51.15:0,51,629	1/1:3,16:19:38.88:427,39,0	0/0:17,0:14:42.13:0,42,571	0/0:11,0:10:5.85:0,6,55	0/0:25,0:25:51.09:0,51,583	1/1:20,0:18:16.07:79,16,0	0/0:23,0:21:33.49:0,33,439	0/0:11,0:11:17.30:0,17,271	0/1:20,0:19:16.04:16,0,167	0/0:25,0:23:32.54:0,33,386	0/0:15,0:15:35.91:0,36,441	0/0:13,0:13:31.70:0,32,400	0/0:23,0:19:3.50:0,3,139	0/0:28,0:23:5.70:0,6,142	0/1:6,0:3:9.01:9,0,20	0/0:22,0:22:7.27:0,7,80	0/0:44,0:43:65.72:0,66,775	0/0:26,0:24:32.96:0,33,415	0/0:21,0:20:32.97:0,33,486	0/0:18,0:18:11.05:0,11,339	0/0:8,0:8:6.25:0,6,109
chr10	41677763	.	GT	G	382.32	PASS	AB=0.953;AC=10;AF=0.179;AN=56;BaseQRankSum=10.861;DP=630;FS=1.863;HRun=1;HaplotypeScore=111.8643;InbreedingCoeff=0.2913;MQ=44.94;MQ0=59;MQRankSum=-8.714;QD=2.33;ReadPosRankSum=0.988;VQSLOD=-0.5145;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:35,2:35:24.37:24,0,199	0/0:6,0:6:14.35:0,14,130	0/0:51,0:5:15.05:0,15,189	0/0:62,0:12:36.11:0,36,445	0/0:16,0:16:21.07:0,21,307	0/0:17,0:17:23.76:0,24,289	0/0:18,0:18:32.03:0,32,355	0/0:23,3:24:23.59:0,24,578	1/1:18,1:19:37.04:352,37,0	0/0:20,0:17:51.15:0,51,664	0/0:12,0:11:5.85:0,6,55	0/0:24,0:24:48.09:0,48,558	1/1:20,0:18:16.05:66,16,0	0/0:23,0:21:30.46:0,30,402	0/0:11,0:11:17.29:0,17,271	0/1:19,1:19:31.46:31,0,165	0/0:26,0:24:35.53:0,36,426	0/0:15,0:15:34.66:0,35,444	0/0:12,0:12:27.34:0,27,375	0/1:24,1:20:27.65:28,0,140	0/0:28,0:23:4.09:0,4,139	0/1:5,1:3:0.15:10,0,0	0/0:21,0:21:7.27:0,7,80	0/0:45,0:44:68.73:0,69,813	0/0:25,0:23:32.97:0,33,426	0/1:20,0:19:14.25:14,0,429	0/1:17,0:17:7.63:8,0,297	0/0:8,0:8:3.52:0,4,105
chr10	41677767	.	GTGT	G	687.16	PASS	AB=0.989;AC=11;AF=0.196;AN=56;BaseQRankSum=11.690;DP=626;FS=1.743;HRun=0;HaplotypeScore=125.0739;InbreedingCoeff=0.3227;MQ=42.68;MQ0=59;MQRankSum=-8.171;QD=4.32;ReadPosRankSum=5.159;VQSLOD=2.0895;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:32,0:32:99:112,0,142	0/0:6,0:6:16.33:0,16,158	0/0:45,0:4:12.04:0,12,152	0/0:57,0:10:30.10:0,30,380	0/0:16,0:16:21.07:0,21,392	0/0:18,0:18:7.01:0,7,316	0/0:20,0:20:20.41:0,20,350	0/0:25,0:24:56.21:0,56,690	1/1:3,11:17:32.85:367,33,0	0/0:20,0:17:51.17:0,51,833	0/0:13,0:12:5.64:0,6,93	0/0:24,0:24:25.51:0,26,489	1/1:19,0:18:20.57:176,21,0	0/0:23,0:21:31.27:0,31,500	0/0:13,0:13:23.29:0,23,460	0/1:20,0:19:99:101,0,123	0/0:25,0:23:22.66:0,23,403	0/0:15,0:15:34.83:0,35,536	0/0:12,0:11:13.42:0,13,310	0/1:27,0:22:3.63:4,0,238	0/1:27,0:23:22.19:22,0,96	1/1:6,0:3:5.87:41,6,0	0/0:20,0:20:0.69:0,1,69	0/0:49,0:48:23.57:0,24,877	0/0:23,0:21:27.05:0,27,393	0/0:22,0:21:8.42:0,8,551	0/0:19,0:19:2.95:0,3,328	0/1:8,0:8:18.25:18,0,100
chr10	41677769	.	GT	G	383.22	PASS	AB=0.967;AC=9;AF=0.161;AN=56;BaseQRankSum=10.393;DP=636;FS=1.255;HRun=1;HaplotypeScore=118.3233;InbreedingCoeff=0.4662;MQ=42.94;MQ0=56;MQRankSum=-9.212;QD=3.04;ReadPosRankSum=3.079;VQSLOD=0.1506;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:34,2:34:99:112,0,142	0/0:6,0:6:14.35:0,14,130	0/0:44,0:4:12.04:0,12,152	0/0:61,0:12:36.11:0,36,451	0/0:19,0:19:24.06:0,24,330	0/0:18,0:18:26.76:0,27,341	0/0:20,0:20:35.04:0,35,394	0/0:25,0:23:50.25:0,50,633	1/1:16,2:17:1.38:232,1,0	0/0:20,0:17:51.16:0,51,681	0/0:14,0:13:8.63:0,9,104	0/0:25,0:25:51.08:0,51,580	1/1:19,0:18:19:93,19,0	0/0:24,0:22:33.75:0,34,438	0/0:13,0:13:23.29:0,23,347	0/1:20,1:20:40.21:40,0,129	0/0:26,0:24:35.54:0,36,440	0/0:15,0:15:34.82:0,35,468	0/0:11,0:10:22.06:0,22,300	0/0:26,0:21:19.83:0,20,273	0/1:26,0:22:1.68:2,0,52	1/1:5,1:4:5.77:41,6,0	0/0:20,0:20:7.27:0,7,79	0/0:49,0:48:80.76:0,81,965	0/0:23,0:21:23.94:0,24,313	0/0:23,0:22:40.45:0,40,556	0/0:20,0:20:32.55:0,33,401	0/0:8,0:8:5:0,5,108
chr10	41678244	.	C	CTCTCTCTT	13657.86	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-0.801;DP=640;FS=2.125;HRun=0;HaplotypeScore=229.7022;InbreedingCoeff=0.9863;MQ=64.32;MQ0=0;MQRankSum=-10.860;QD=60.17;ReadPosRankSum=0.270;VQSLOD=4.8295;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:64.77:0,65,1672	0/0:12,0:12:33.11:0,33,879	0/0:23,0:21:10.22:0,10,865	0/0:25,0:23:29.42:0,29,465	0/0:25,0:25:38.73:0,39,941	1/1:8,20:32:48.08:1800,48,0	1/1:7,16:25:38.86:1371,39,0	0/0:34,0:34:58.72:0,59,1495	1/1:13,9:22:50.97:1446,51,0	0/0:29,0:29:81.21:0,81,1946	0/0:24,0:24:66.23:0,66,1762	1/1:11,22:35:48.40:2556,48,0	1/1:7,18:27:42.08:1681,42,0	0/0:22,0:22:54.17:0,54,1384	0/0:25,0:25:63.22:0,63,1659	0/0:24,0:24:62.26:0,62,1613	1/1:10,7:17:24.35:1056,24,0	0/0:9,0:9:18.06:0,18,403	0/0:26,0:26:45.15:0,45,1110	0/0:17,0:17:39.10:0,39,873	0/0:17,0:17:38.61:0,39,871	1/1:10,10:20:42.08:1410,42,0	1/1:18,12:30:53.46:1620,53,0	1/1:14,5:19:32.93:719,33,0	0/0:22,0:22:54.19:0,54,1442	0/0:20,0:20:54.18:0,54,1345	0/0:21,0:21:54.15:0,54,1348	0/0:5,0:5:12.04:0,12,322
chr10	41679923	.	AGT	A	2007.96	PASS	AB=0.743;AC=27;AF=0.519;AN=52;BaseQRankSum=-2.693;DP=587;FS=0.000;HRun=0;HaplotypeScore=141.2047;InbreedingCoeff=0.3917;MQ=61.34;MQ0=9;MQRankSum=0.453;QD=5.87;ReadPosRankSum=-0.047;VQSLOD=3.2292;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:24,8:32:6.91:232,7,0	0/0:9,0:9:14.41:0,14,189	./.	./.	0/1:9,3:13:53.22:85,0,53	0/0:21,0:19:5.96:0,6,43	0/0:31,0:29:6.89:0,7,45	0/1:19,0:25:1.92:18,0,2	0/0:11,0:10:8.81:0,9,80	1/1:9,8:16:23.80:241,24,0	0/1:12,7:21:37.05:66,0,37	0/0:29,0:27:9.01:0,9,96	0/0:23,0:22:18.32:0,18,147	1/1:14,11:25:27.07:292,27,0	1/1:12,12:25:23.90:247,24,0	0/1:8,14:23:21.63:190,0,22	0/0:22,0:21:3.95:0,4,41	1/1:8,6:14:6.23:253,6,0	1/1:8,0:8:0.47:1,0,0	0/1:6,0:17:1.96:75,0,2	1/1:27,0:37:22.66:113,23,0	0/0:21,0:19:2.53:0,3,24	0/1:13,0:12:0:0,0,0	0/0:27,0:27:16.55:0,17,143	1/1:9,6:15:12.03:133,12,0	0/1:14,0:22:36.67:90,0,37	1/1:17,0:23:15.05:114,15,0	1/1:6,0:9:5.68:28,6,0
chr10	41680133	.	TG	T	3597.31	PASS	AB=0.988;AC=28;AF=0.500;AN=56;BaseQRankSum=8.991;DP=558;FS=37.984;HRun=1;HaplotypeScore=112.6410;InbreedingCoeff=0.2760;MQ=69.20;MQ0=0;MQRankSum=-8.014;QD=10.10;ReadPosRankSum=2.948;VQSLOD=-0.3580;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:28:18.93:35,0,19	0/0:11,0:11:33.11:0,33,415	0/0:24,1:23:35.85:0,36,549	0/0:14,0:13:29.17:0,29,359	0/1:17,0:17:33.40:40,0,33	1/1:5,13:18:44.26:445,44,0	1/1:6,17:23:62.42:556,62,0	0/0:37,0:36:40.47:0,40,285	1/1:3,8:11:30.01:278,30,0	0/0:26,0:26:15.19:0,15,117	0/1:16,0:16:4.01:33,0,4	1/1:4,10:14:38.99:343,39,0	1/1:3,9:12:28.70:282,29,0	0/1:19,0:19:12.76:13,0,56	0/0:22,0:22:11.19:0,11,114	0/1:23,1:24:15.07:15,0,65	1/1:8,16:24:56.59:450,57,0	0/0:15,0:15:1.71:0,2,14	0/0:27,0:27:8.14:0,8,179	0/1:25,0:25:8.73:54,0,9	0/0:25,0:25:9.54:0,10,111	1/1:8,8:16:26.48:334,26,0	1/1:3,11:14:32.97:287,33,0	1/1:12,4:16:41.83:336,42,0	0/1:23,0:23:21.26:21,0,34	0/1:22,0:22:42.16:42,0,71	0/1:22,0:22:19.49:19,0,35	0/1:11,1:12:12.18:13,0,12
chr10	41680134	.	GT	G	6912.69	PASS	AB=1.000;AC=48;AF=0.857;AN=56;BaseQRankSum=-0.387;DP=556;FS=3.036;HRun=11;HaplotypeScore=102.1575;InbreedingCoeff=0.7318;MQ=69.19;MQ0=0;MQRankSum=-4.928;QD=13.63;ReadPosRankSum=2.653;VQSLOD=5.1317;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,26:28:56.93:467,57,0	0/0:11,0:11:33.08:0,33,352	0/0:24,0:22:25.34:0,25,346	0/0:14,0:13:18.02:0,18,175	1/1:3,13:17:38.56:315,39,0	1/1:20,0:20:33.04:107,33,0	1/1:23,0:23:40.61:138,41,0	1/1:9,28:36:48.87:608,49,0	1/1:12,0:12:12.81:35,13,0	1/1:4,22:26:65.81:530,66,0	1/1:1,16:17:44.80:360,45,0	1/1:16,0:16:19.62:64,20,0	0/1:12,0:12:1.73:29,0,2	1/1:3,15:19:34.99:276,35,0	1/1:5,17:22:38.95:320,39,0	1/1:3,20:23:49.74:399,50,0	1/1:24,0:24:26.16:84,26,0	1/1:1,13:14:26.97:222,27,0	1/1:6,19:25:62.21:477,62,0	1/1:1,23:24:65.63:520,66,0	1/1:6,19:25:44.93:369,45,0	0/1:17,0:17:18.43:18,0,42	1/1:14,0:14:22.17:71,22,0	1/1:16,0:15:8.52:26,9,0	1/1:0,21:21:44.95:369,45,0	1/1:2,20:22:48.61:418,49,0	1/1:2,20:22:56.90:468,57,0	1/1:1,10:11:26.97:222,27,0
chr10	41680142	.	TTTTA	T	3946.90	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=10.839;DP=546;FS=5.610;HRun=0;HaplotypeScore=136.2655;InbreedingCoeff=0.9609;MQ=67.64;MQ0=0;MQRankSum=-11.940;QD=27.22;ReadPosRankSum=0.464;VQSLOD=3.2190;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:72.22:0,72,1043	0/0:12,0:12:36.12:0,36,961	0/0:21,0:19:55.48:0,55,973	0/0:10,0:9:27.09:0,27,539	0/0:19,0:19:57.14:0,57,775	1/1:11,12:23:53.38:659,53,0	1/1:2,17:19:48.23:639,48,0	0/0:34,0:34:96.31:0,96,1462	1/1:12,0:12:26.68:424,27,0	0/0:26,0:26:78.23:0,78,1083	0/0:17,0:17:51.13:0,51,733	1/1:2,10:12:22.77:333,23,0	1/1:12,1:13:35.58:491,36,0	0/0:16,0:16:36.11:0,36,520	0/0:18,0:18:42.13:0,42,613	0/0:25,0:25:11.07:0,11,870	1/1:8,14:22:38.92:439,39,0	0/0:15,0:15:33.06:0,33,452	0/0:27,0:27:81.20:0,81,1083	0/0:24,0:24:72.22:0,72,1024	0/0:22,0:22:51.15:0,51,727	1/1:16,1:17:2.33:370,2,0	1/1:5,11:16:36.01:427,36,0	1/1:7,4:11:16.98:166,17,0	0/0:21,0:21:45.15:0,45,673	0/0:23,0:23:69.18:0,69,988	0/0:27,0:27:78.23:0,78,1151	0/0:12,0:12:30.10:0,30,457
chr10	41680143	.	TTTA	T	3230.05	PASS	AB=0.750;AC=17;AF=0.304;AN=56;BaseQRankSum=10.567;DP=549;FS=5.481;HRun=0;HaplotypeScore=127.8959;InbreedingCoeff=0.9528;MQ=66.67;MQ0=0;MQRankSum=-11.692;QD=21.82;ReadPosRankSum=0.119;VQSLOD=3.4058;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:72.15:0,72,757	0/0:12,0:12:36.12:0,36,797	0/0:21,0:19:56.34:0,56,838	0/0:8,0:7:21.07:0,21,375	0/0:19,0:19:56.57:0,57,551	1/1:23,0:23:52.47:598,52,0	1/1:19,0:19:50.69:571,51,0	0/0:34,0:34:96.20:0,96,1016	1/1:6,8:14:35.39:353,35,0	0/0:25,0:25:73.59:0,74,724	0/0:17,0:17:48.02:0,48,498	1/1:12,0:12:23.07:296,23,0	1/1:6,7:13:30.82:359,31,0	0/0:16,0:16:35.57:0,36,348	0/0:18,0:18:42.09:0,42,431	0/0:24,1:25:31.80:0,32,610	1/1:22,0:22:38.44:383,38,0	0/0:17,0:17:36.03:0,36,353	0/0:27,0:27:77.94:0,78,733	0/0:24,0:24:71.73:0,72,711	0/0:20,0:20:48.10:0,48,493	0/1:12,6:18:0.69:335,0,1	1/1:16,0:16:36.07:385,36,0	1/1:11,0:10:19.55:161,20,0	0/0:22,0:22:48.10:0,48,491	0/0:24,0:24:70.36:0,70,725	0/0:28,0:28:81.14:0,81,866	0/0:12,0:12:30.07:0,30,321
chr10	41680145	.	TA	T	2777.70	PASS	AB=1.000;AC=20;AF=0.357;AN=56;BaseQRankSum=7.571;DP=549;FS=27.292;HRun=3;HaplotypeScore=109.2961;InbreedingCoeff=0.7683;MQ=69.89;MQ0=0;MQRankSum=-8.761;QD=14.24;ReadPosRankSum=-0.503;VQSLOD=1.6518;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:7.70:0,8,137	0/0:12,0:12:36.11:0,36,461	0/0:23,0:22:52.65:0,53,535	0/0:7,0:7:21:0,21,212	0/0:18,0:18:5.86:0,6,97	1/1:23,0:23:68.33:544,68,0	1/1:17,2:19:56.87:466,57,0	0/0:34,0:34:41.20:0,41,239	1/1:14,0:14:41.68:322,42,0	0/0:24,0:24:17.58:0,18,104	0/0:18,0:18:5.96:0,6,62	1/1:13,0:13:38.80:303,39,0	1/1:12,0:12:26.89:248,27,0	0/0:17,0:17:6.25:0,6,49	0/0:18,0:18:11.54:0,12,49	0/1:24,0:24:0.93:1,0,83	1/1:16,6:22:35.89:298,36,0	0/0:17,0:17:10.75:0,11,80	0/0:26,0:26:5.36:0,5,143	0/1:24,0:24:12:12,0,47	0/0:20,0:20:8.50:0,8,42	1/1:18,0:18:40.28:337,40,0	1/1:15,0:15:38.89:310,39,0	1/1:10,1:10:20.72:141,21,0	0/0:24,0:24:14.18:0,14,80	0/0:24,0:24:26.23:0,26,140	0/0:26,0:26:12.80:0,13,147	0/0:12,0:12:6.42:0,6,36
chr10	41680619	.	T	TA	3107.37	PASS	AB=0.770;AC=12;AF=0.214;AN=56;BaseQRankSum=-6.353;DP=611;FS=3.430;HRun=10;HaplotypeScore=70.3222;InbreedingCoeff=0.8271;MQ=70.69;MQ0=0;MQRankSum=-0.145;QD=20.18;ReadPosRankSum=1.034;VQSLOD=4.7213;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:65.89:0,66,538	0/0:17,1:18:9.91:0,10,280	0/0:17,0:18:7.99:0,8,147	0/1:17,0:17:8.20:8,0,102	0/0:31,0:34:84.91:0,85,670	0/0:24,0:24:56.90:0,57,465	0/0:9,0:9:20.97:0,21,172	0/0:24,0:25:49.93:0,50,396	0/1:3,17:20:1.16:399,0,1	0/0:23,0:23:42.82:0,43,347	0/0:25,2:28:44.93:0,45,559	1/1:1,19:20:48.12:512,48,0	1/1:1,20:21:57.14:607,57,0	0/0:19,0:19:41.88:0,42,341	0/0:16,0:17:46.94:0,47,369	0/0:20,0:20:50.59:0,51,405	0/0:25,0:25:68.87:0,69,561	0/0:15,0:15:38.93:0,39,316	0/0:14,0:14:26.95:0,27,222	0/0:39,1:42:67.93:0,68,742	0/0:8,0:8:20.95:0,21,169	1/1:6,17:23:32.49:543,32,0	1/1:6,24:31:68.81:705,69,0	1/1:1,20:21:48.12:512,48,0	0/0:28,0:28:65.80:0,66,531	0/0:23,0:24:49.92:0,50,394	0/0:25,0:25:68.87:0,69,561	0/0:17,0:17:38.90:0,39,320
chr10	41685239	.	CTTT	C	2340.59	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=10.381;DP=656;FS=11.401;HRun=4;HaplotypeScore=93.7536;InbreedingCoeff=0.9987;MQ=82.83;MQ0=0;MQRankSum=-5.013;QD=45.01;ReadPosRankSum=2.265;VQSLOD=2.2893;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:99:0,99,2234	0/0:11,0:11:33.11:0,33,780	0/0:28,0:28:81.28:0,81,1749	0/0:20,0:21:55.31:0,55,1243	0/0:33,0:33:99:0,99,2295	0/0:36,0:36:99:0,108,2535	0/0:13,0:13:39.13:0,39,921	0/0:40,0:40:99:0,120,2791	1/1:1,14:15:36.12:631,36,0	0/0:22,0:22:66.23:0,66,1547	0/0:23,0:23:69.23:0,69,1593	0/0:24,0:24:72.22:0,72,1613	1/1:0,18:18:51.17:900,51,0	0/0:20,0:20:54.19:0,54,1272	0/0:25,0:25:75.26:0,75,1777	0/0:25,0:25:75.26:0,75,1774	0/0:30,0:30:90.31:0,90,2126	0/0:17,0:17:48.16:0,48,1098	0/0:25,0:25:75.23:0,75,1729	0/0:39,0:39:99:0,117,2768	0/0:9,0:9:27.09:0,27,639	1/1:0,19:19:54.19:953,54,0	0/0:24,0:24:72.25:0,72,1703	0/0:22,0:22:66.22:0,66,1518	0/0:18,0:18:51.18:0,51,1207	0/0:30,0:30:90.31:0,90,2134	0/0:28,0:28:81.26:0,81,1869	0/0:8,0:8:24.08:0,24,568
chr10	41688132	.	A	AG	1397.98	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-6.606;DP=519;FS=0.000;HRun=1;HaplotypeScore=53.6536;InbreedingCoeff=0.9078;MQ=73.74;MQ0=0;MQRankSum=0.157;QD=34.95;ReadPosRankSum=0.934;VQSLOD=3.4662;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:75.24:0,75,973	0/0:1,0:1:3.01:0,3,39	0/0:10,0:10:27.09:0,27,341	0/0:8,0:8:24.04:0,24,288	1/1:0,16:16:48.08:668,48,0	0/0:28,0:28:84.23:0,84,1048	0/0:15,0:15:45.13:0,45,568	0/0:23,0:23:69.22:0,69,895	0/0:11,0:11:33.11:0,33,429	0/0:25,0:25:75.24:0,75,965	0/0:21,0:21:63.20:0,63,818	0/0:17,0:17:51.17:0,51,661	0/0:15,0:15:45.15:0,45,584	1/1:2,22:24:57.19:851,57,0	0/0:25,0:25:75.23:0,75,960	0/0:27,0:27:75.24:0,75,974	0/0:24,0:24:66.21:0,66,856	0/0:46,0:46:99:0,135,1733	0/0:18,0:18:51.17:0,51,662	0/0:19,0:19:54.16:0,54,686	0/0:7,0:7:21.07:0,21,273	0/0:6,0:6:18.06:0,18,233	0/0:17,0:17:45.13:0,45,570	0/0:7,0:7:21.07:0,21,273	0/0:25,0:25:75.24:0,75,973	0/0:23,0:23:66.21:0,66,856	0/0:25,0:25:75.21:0,75,945	0/0:10,0:10:30.10:0,30,389
chr10	41688380	.	TATACTC	T	3225.28	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=7.447;DP=544;FS=1.202;HRun=0;HaplotypeScore=135.7599;InbreedingCoeff=0.9940;MQ=78.26;MQ0=0;MQRankSum=-10.408;QD=59.73;ReadPosRankSum=1.191;VQSLOD=3.6626;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:66.20:0,66,2111	0/0:8,0:8:24.08:0,24,864	0/0:25,0:24:60.20:0,60,1822	0/0:9,0:9:24.08:0,24,763	0/0:25,0:25:63.22:0,63,2200	0/0:18,0:18:51.16:0,51,1714	0/0:18,0:18:39.13:0,39,1323	0/0:22,0:22:63.17:0,63,2109	1/1:0,19:19:48.16:1153,48,0	0/0:32,0:32:93.32:0,93,3213	0/0:23,0:23:60.19:0,60,1993	0/0:17,0:17:51.18:0,51,1839	1/1:1,19:21:60.21:1422,60,0	0/0:14,0:14:36.12:0,36,1216	0/0:20,0:20:45.15:0,45,1602	0/0:21,0:21:45.15:0,45,1538	0/0:18,0:18:24.08:0,24,839	0/0:10,0:10:24.08:0,24,863	0/0:19,0:19:51.17:0,51,1734	0/0:22,0:22:63.22:0,63,2211	0/0:20,0:20:48.16:0,48,1690	1/1:1,13:14:33.11:793,33,0	0/0:16,0:16:48.16:0,48,1716	0/0:15,0:15:39.13:0,39,1370	0/0:21,0:21:54.16:0,54,1858	0/0:29,0:29:87.29:0,87,2985	0/0:34,0:34:99:0,99,3422	0/0:7,0:7:18.06:0,18,611
chr10	41688400	.	TCTTCCTTCCTTC	T	3425.01	PASS	AB=0.985;AC=15;AF=0.288;AN=52;BaseQRankSum=3.451;DP=537;FS=5.134;HRun=0;HaplotypeScore=193.3892;InbreedingCoeff=0.6519;MQ=63.73;MQ0=7;MQRankSum=-5.673;QD=19.46;ReadPosRankSum=0.534;VQSLOD=2.6034;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:23.36:0,23,333	./.	./.	0/0:6,0:6:3.01:0,3,36	0/1:24,0:24:11.98:12,0,14	0/0:17,0:17:45.15:0,45,2061	0/0:11,0:22:18.03:0,18,342	0/0:31,0:28:27.02:0,27,456	0/0:18,0:17:24.08:0,24,1077	1/1:11,12:23:30.07:776,30,0	1/1:9,15:24:39.07:1113,39,0	0/0:20,0:20:39.11:0,39,1598	0/0:22,0:22:29.85:0,30,1172	1/1:14,0:14:6.02:146,6,0	1/1:7,14:21:21.07:722,21,0	0/0:22,0:22:11.87:0,12,115	0/0:20,0:19:9.50:0,10,460	1/1:9,0:9:12.04:232,12,0	0/0:20,0:19:27.09:0,27,1299	0/0:17,0:17:27.09:0,27,1150	0/0:14,0:21:30.10:0,30,1149	0/0:16,0:16:33.11:0,33,1414	0/0:19,0:18:36.08:0,36,1237	0/1:18,0:18:10.78:11,0,807	1/1:12,10:22:12.04:389,12,0	0/1:20,0:21:22.87:23,0,1239	0/0:32,0:32:72.25:0,72,3432	0/0:7,0:7:12.04:0,12,611
chr10	41688404	.	C	CCTTT	1867.03	PASS	AB=1.000;AC=16;AF=0.286;AN=56;BaseQRankSum=5.748;DP=525;FS=19.045;HRun=0;HaplotypeScore=120.1803;InbreedingCoeff=0.6517;MQ=61.91;MQ0=8;MQRankSum=-3.293;QD=10.61;ReadPosRankSum=-1.774;VQSLOD=1.6734;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:50.65:0,51,486	0/1:6,0:6:2.01:2,0,102	0/0:18,0:13:29.06:0,29,292	0/0:6,0:6:18.02:0,18,178	1/1:22,0:22:47.43:343,47,0	0/0:17,0:17:51.12:0,51,774	0/0:21,0:21:22.82:0,23,315	0/0:31,0:28:63.70:0,64,518	1/1:19,0:18:24.24:185,24,0	0/0:20,0:20:47.70:0,48,467	0/0:23,0:23:56.95:0,57,566	0/1:20,0:20:99:187,0,111	1/1:23,0:23:37.25:320,37,0	1/1:13,0:13:14.74:154,15,0	0/0:21,0:21:41.98:0,42,413	0/0:22,0:22:35.78:0,36,355	1/1:4,12:19:13.23:273,13,0	0/0:8,0:8:23.94:0,24,224	0/0:20,0:18:54.08:0,54,686	0/0:17,0:17:45.81:0,46,542	0/0:21,0:21:50.96:0,51,590	1/1:15,0:15:11.69:210,12,0	0/1:20,0:19:72.79:140,0,73	0/1:18,0:18:36.48:241,0,36	0/0:22,0:22:45:0,45,421	0/0:18,0:18:51.07:0,51,658	0/0:30,0:30:88.97:0,89,1235	0/0:7,0:7:7.86:0,8,213
chr10	41688436	.	CCTTCCTTCCTTTCTTTCTTT	C	307.75	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=3.100;DP=459;FS=0.000;HRun=0;HaplotypeScore=224.0952;InbreedingCoeff=0.5547;MQ=54.96;MQ0=10;MQRankSum=-1.141;QD=9.33;ReadPosRankSum=-2.451;VQSLOD=1.7659;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:24.53:0,25,958	0/0:1,0:1:3.01:0,3,167	0/0:5,0:1:3.01:0,3,58	0/0:3,0:2:5.05:0,5,108	1/1:0,9:9:8.93:77,9,0	0/0:22,0:22:66.21:0,66,3838	0/0:20,0:20:33.10:0,33,1703	0/0:31,0:25:64.56:0,65,1759	0/0:17,0:16:45.13:0,45,2606	0/0:17,0:16:32.99:0,33,704	0/0:23,0:23:22.40:0,22,1316	0/0:18,0:18:51.18:0,51,3184	0/0:19,0:19:51.05:0,51,2841	1/1:0,14:14:6.02:326,6,0	0/0:22,0:22:45.15:0,45,1306	0/0:19,0:19:15.49:0,15,351	0/0:15,0:15:26.61:0,27,1350	0/1:10,0:10:16.87:17,0,586	0/0:18,0:13:39.05:0,39,2441	0/0:14,0:14:39.11:0,39,2365	0/0:19,0:19:45.12:0,45,2415	0/0:13,0:13:39.06:0,39,2410	0/0:18,0:18:45.15:0,45,2700	0/0:15,0:15:19.84:0,20,1959	0/0:16,0:16:30.10:0,30,753	0/0:22,0:22:38.22:0,38,3697	0/0:29,0:29:87.29:0,87,6007	0/0:8,0:8:24.08:0,24,1586
chr10	41688440	.	CCTTCCTTT	C	1662.84	PASS	AB=0.954;AC=14;AF=0.250;AN=56;BaseQRankSum=6.788;DP=463;FS=7.992;HRun=0;HaplotypeScore=124.9929;InbreedingCoeff=-0.0288;MQ=55.10;MQ0=10;MQRankSum=-7.301;QD=8.31;ReadPosRankSum=1.800;VQSLOD=1.4992;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:3,17:20:54.68:341,0,55	0/0:1,0:1:2.92:0,3,17	0/0:4,0:1:2.96:0,3,19	0/0:3,0:2:5.23:0,5,41	0/1:9,0:9:12.02:14,0,12	0/0:24,0:24:62.78:0,63,1511	0/0:21,0:21:36.02:0,36,396	0/0:30,0:24:35.89:0,36,438	0/1:16,0:16:75.94:76,0,558	0/1:18,0:17:99:205,0,101	0/1:23,0:23:99:307,0,139	0/0:18,0:18:54.09:0,54,1240	0/1:17,0:17:99:140,0,625	1/1:14,0:14:6.02:102,6,0	0/1:24,0:24:99:210,0,183	1/1:2,17:19:8.69:251,9,0	0/0:17,0:17:31.99:0,32,580	0/1:10,0:10:34.96:35,0,125	0/0:20,0:15:42.08:0,42,963	0/0:15,0:15:36.06:0,36,871	0/0:19,0:19:39.06:0,39,733	0/1:14,0:14:38.94:39,0,664	0/0:16,0:16:42.41:0,42,928	0/0:14,0:14:31.08:0,31,644	0/1:16,0:16:99:102,0,111	0/0:22,0:22:63:0,63,1220	0/0:30,0:30:87.17:0,87,2432	0/0:9,0:9:27.02:0,27,574
chr10	41688596	.	CT	C	580.07	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.010;DP=515;FS=6.140;HRun=2;HaplotypeScore=51.0613;InbreedingCoeff=0.9333;MQ=54.47;MQ0=24;MQRankSum=0.314;QD=25.22;ReadPosRankSum=1.299;VQSLOD=3.1890;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,99,1440	0/0:7,0:7:21.07:0,21,315	0/0:18,0:7:9.01:0,9,114	0/0:14,0:3:9.01:0,9,101	1/1:0,14:14:30.01:351,30,0	0/0:14,0:14:39.13:0,39,584	0/0:24,0:24:69.06:0,69,931	0/0:29,0:26:78.22:0,78,1089	0/0:18,0:18:51.12:0,51,738	0/0:18,0:16:48.15:0,48,701	0/0:17,0:17:48.16:0,48,718	0/0:16,0:16:45.14:0,45,655	0/0:23,0:23:66.22:0,66,987	1/1:0,9:9:27.09:350,27,0	0/0:15,0:15:45.05:0,45,612	0/0:16,0:16:45.14:0,45,654	0/0:31,0:31:93.29:0,93,1338	0/0:15,0:15:45.15:0,45,674	0/0:29,0:22:66.19:0,66,933	0/0:10,0:10:30.10:0,30,448	0/0:36,0:35:96.31:0,96,1411	0/0:7,0:7:21.07:0,21,315	0/0:8,0:8:24.07:0,24,341	0/0:29,0:28:81.26:0,81,1195	0/0:16,0:16:42.14:0,42,630	0/0:16,0:15:45.14:0,45,651	0/0:25,0:24:72.20:0,72,1035	0/0:6,0:6:18.06:0,18,270
chr10	41688682	.	GT	G	779.24	PASS	AB=0.942;AC=14;AF=0.250;AN=56;BaseQRankSum=8.830;DP=457;FS=1.034;HRun=11;HaplotypeScore=62.7513;InbreedingCoeff=0.6569;MQ=61.92;MQ0=0;MQRankSum=-3.270;QD=5.57;ReadPosRankSum=0.966;VQSLOD=1.4879;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:2,0:27:62.34:0,62,312	0/0:11,0:11:30.08:0,30,319	0/1:9,0:6:5.84:6,0,34	0/1:16,0:6:0.23:0,0,4	1/1:6,0:20:31.71:92,32,0	0/0:11,1:12:2.42:0,2,224	0/0:8,0:8:18.05:0,18,192	0/0:26,2:28:16.32:0,16,535	0/0:16,0:16:42.04:0,42,432	0/0:22,2:24:4.87:0,5,455	0/0:12,0:14:38.79:0,39,352	1/1:3,11:14:29.95:246,30,0	0/0:11,0:11:24.06:0,24,255	1/1:1,0:7:14.04:40,14,0	0/0:22,0:22:63.02:0,63,653	0/0:4,0:12:24.80:0,25,120	0/1:17,2:19:2.04:2,0,219	0/0:16,1:17:17.46:0,17,383	0/1:20,4:24:35.51:36,0,448	0/0:17,0:17:39.05:0,39,402	0/0:12,0:12:30.08:0,30,320	0/0:10,0:10:21.05:0,21,224	1/1:3,10:13:23.96:197,24,0	1/1:4,12:15:41.72:336,42,0	0/0:18,1:19:32.46:0,32,537	0/0:24,1:25:35.42:0,35,566	0/0:20,1:22:38.50:0,39,504	0/0:10,0:10:24.05:0,24,250
chr10	41688729	.	T	TTTTTG	2519.40	PASS	AB=0.991;AC=10;AF=0.179;AN=56;BaseQRankSum=-5.059;DP=483;FS=1.433;HRun=0;HaplotypeScore=95.3989;InbreedingCoeff=0.7507;MQ=59.02;MQ0=16;MQRankSum=-1.061;QD=16.05;ReadPosRankSum=-0.343;VQSLOD=2.9762;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:45.15:0,45,784	0/0:8,0:7:15.04:0,15,233	0/1:29,0:12:1.79:2,0,27	0/1:55,0:14:8.98:9,0,39	0/0:7,0:7:20.93:0,21,161	0/0:9,0:9:15.03:0,15,232	0/0:10,0:10:6.63:0,7,215	0/0:22,0:22:27.09:0,27,454	0/0:4,0:11:21.06:0,21,243	0/0:25,0:24:45.15:0,45,821	0/0:21,0:20:48.16:0,48,876	1/1:4,6:12:15.05:429,15,0	0/0:5,0:10:13.28:0,13,143	0/0:4,0:4:11.95:0,12,93	0/0:15,0:15:27.08:0,27,415	0/0:8,0:8:21.06:0,21,359	1/1:12,15:28:27.09:722,27,0	0/0:23,0:22:51.15:0,51,878	0/0:25,0:18:33.08:0,33,518	0/0:15,0:15:27.09:0,27,502	0/0:11,0:10:18.06:0,18,316	0/0:2,0:6:9.03:0,9,105	1/1:4,13:16:36.12:1028,36,0	1/1:6,9:14:21.07:490,21,0	0/0:25,0:25:66.21:0,66,1113	0/0:12,0:12:24.04:0,24,401	0/0:20,0:20:32.19:0,32,699	0/0:11,0:11:20.99:0,21,319
chr10	41688736	.	T	TG	415.37	PASS	AB=0.955;AC=6;AF=0.107;AN=56;BaseQRankSum=6.503;DP=467;FS=10.469;HRun=0;HaplotypeScore=69.7561;InbreedingCoeff=0.5800;MQ=62.09;MQ0=11;MQRankSum=-5.532;QD=4.89;ReadPosRankSum=-1.041;VQSLOD=1.9295;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:72.23:0,72,989	0/0:7,0:7:21.07:0,21,294	0/0:28,0:15:17.05:0,17,230	0/1:63,0:21:8.39:8,0,251	1/1:1,7:8:21.07:331,21,0	0/0:7,0:7:21.06:0,21,277	0/1:9,1:10:16.07:16,0,325	0/0:21,0:21:63.19:0,63,838	0/0:11,0:11:20.43:0,20,194	0/0:21,0:21:59.84:0,60,815	0/0:22,0:21:63.21:0,63,880	0/0:11,0:11:23.72:0,24,185	0/0:7,0:7:3.87:0,4,51	1/1:0,4:4:12.04:189,12,0	0/0:13,0:13:39.12:0,39,530	0/0:9,0:9:27.09:0,27,376	0/0:23,0:23:41.34:0,41,328	0/0:24,0:23:66.22:0,66,922	0/0:22,0:16:45.14:0,45,615	0/0:16,0:16:48.03:0,48,644	0/0:8,0:8:21.07:0,21,294	0/0:5,0:5:14.21:0,14,98	0/0:17,0:16:36.92:0,37,319	0/0:13,0:12:23.57:0,24,210	0/0:25,0:25:75.25:0,75,1048	0/0:11,0:11:33.06:0,33,425	0/0:23,0:23:69.21:0,69,931	0/0:10,0:10:30.10:0,30,419
chr10	41688746	.	TTTG	T	789.49	PASS	AB=1.000;AC=8;AF=0.143;AN=56;BaseQRankSum=7.768;DP=470;FS=5.531;HRun=0;HaplotypeScore=87.7779;InbreedingCoeff=0.6945;MQ=67.09;MQ0=5;MQRankSum=-4.014;QD=20.24;ReadPosRankSum=1.254;VQSLOD=2.6451;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:72.24:0,72,1493	0/0:7,0:7:18.06:0,18,374	0/0:32,0:21:44.46:0,44,546	0/0:64,0:24:32.47:0,32,471	1/1:0,11:11:30.03:472,30,0	0/0:6,0:6:18.06:0,18,400	0/0:9,0:9:24.05:0,24,435	0/0:20,0:20:57.19:0,57,1094	1/1:9,0:9:22.29:122,22,0	0/0:17,0:17:45.15:0,45,1006	0/0:23,0:23:69.23:0,69,1417	0/0:10,0:10:21.07:0,21,315	0/1:10,0:10:58.52:59,0,96	1/1:0,5:5:15.05:251,15,0	0/0:13,0:13:33.11:0,33,681	0/0:11,0:11:33.11:0,33,674	0/0:23,0:23:45.12:0,45,669	0/0:22,0:22:60.20:0,60,1308	0/0:20,0:18:54.18:0,54,1056	0/0:15,0:15:45.14:0,45,885	0/0:7,0:7:18.06:0,18,403	0/1:4,0:4:28.11:38,0,28	0/0:16,0:16:47.90:0,48,710	0/0:12,0:12:24.08:0,24,401	0/0:28,0:28:84.29:0,84,1749	0/0:10,0:10:27.09:0,27,575	0/0:23,0:23:63.17:0,63,1246	0/0:15,0:15:36.12:0,36,664
chr10	41689178	.	A	AT	1445.59	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-6.412;DP=573;FS=0.590;HRun=7;HaplotypeScore=57.6960;InbreedingCoeff=0.9959;MQ=83.00;MQ0=0;MQRankSum=-0.751;QD=30.12;ReadPosRankSum=2.292;VQSLOD=4.0564;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:69.11:0,69,666	0/0:17,0:17:42.54:0,43,406	0/0:22,0:22:42.02:0,42,391	0/0:15,0:15:32.98:0,33,305	0/0:34,0:34:87.13:0,87,840	0/0:19,0:19:51.08:0,51,492	0/0:17,0:17:48.06:0,48,458	0/0:27,0:27:72.09:0,72,685	1/1:0,12:12:30.09:362,30,0	0/0:23,0:23:63.10:0,63,608	0/0:33,0:33:93.15:0,93,898	0/0:21,0:21:60.09:0,60,579	1/1:2,18:20:57.17:682,57,0	0/0:10,0:10:21.03:0,21,203	0/0:25,0:25:63.09:0,63,608	0/0:20,0:20:54.07:0,54,517	0/0:30,0:30:81.08:0,81,767	0/0:12,0:12:33.05:0,33,319	0/0:22,0:22:63.04:0,63,591	0/0:25,0:25:69.11:0,69,666	0/0:11,0:11:24.03:0,24,232	1/1:0,16:16:45.14:544,45,0	0/0:20,0:20:51.08:0,51,492	0/0:16,0:16:45.02:0,45,425	0/0:26,0:26:69.11:0,69,666	0/0:28,0:28:75.12:0,75,724	0/0:21,0:21:63.09:0,63,603	0/0:7,0:7:21.03:0,21,203
chr10	41689534	.	G	GT	1927.88	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-8.193;DP=679;FS=2.542;HRun=3;HaplotypeScore=61.9979;InbreedingCoeff=0.9978;MQ=75.42;MQ0=0;MQRankSum=-0.223;QD=34.43;ReadPosRankSum=0.517;VQSLOD=4.1432;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:84.23:0,84,993	0/0:11,0:11:33.10:0,33,396	0/0:15,0:15:45.14:0,45,538	0/0:11,0:11:25.65:0,26,230	1/1:1,40:41:99:1629,120,0	0/0:27,0:27:78.24:0,78,936	0/0:19,0:19:56.76:0,57,658	0/0:32,0:32:84.25:0,84,998	0/0:15,0:15:45.14:0,45,540	0/0:28,0:28:78.23:0,78,927	0/0:33,0:33:90.27:0,90,1069	0/0:21,0:21:63.18:0,63,744	0/0:21,0:21:57.17:0,57,684	1/1:0,15:15:30.10:420,30,0	0/0:35,0:35:99:0,99,1188	0/0:32,0:32:90.28:0,90,1080	0/0:25,0:25:72.21:0,72,852	0/0:22,0:22:63.19:0,63,755	0/0:22,0:22:63.17:0,63,742	0/0:30,0:30:84.26:0,84,1008	0/0:20,0:20:60.18:0,60,720	0/0:22,0:22:63.18:0,63,746	0/0:35,0:35:99:0,102,1211	0/0:15,0:15:42.13:0,42,504	0/0:31,0:31:90.26:0,90,1068	0/0:24,0:24:69.21:0,69,828	0/0:36,0:36:99:0,105,1238	0/0:8,0:8:24.01:0,24,239
chr10	41694898	.	T	TTTA	13513.58	PASS	AB=0.895;AC=25;AF=0.446;AN=56;BaseQRankSum=-13.836;DP=667;FS=1.412;HRun=0;HaplotypeScore=92.9849;InbreedingCoeff=0.9267;MQ=80.22;MQ0=0;MQRankSum=-5.659;QD=41.71;ReadPosRankSum=6.580;VQSLOD=5.9299;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,16:18:42.14:937,42,0	0/0:11,0:11:33.09:0,33,512	0/0:26,0:26:72.25:0,72,1157	0/0:18,0:18:45.61:0,46,710	1/1:3,20:22:48.16:982,48,0	0/0:26,0:26:72.25:0,72,1173	0/0:23,0:23:63.22:0,63,1024	0/0:46,0:46:99:0,120,1934	1/1:5,24:31:51.18:1139,51,0	1/1:5,17:22:54.19:1202,54,0	1/1:4,15:21:27.09:601,27,0	0/0:18,0:18:51.16:0,51,809	1/1:1,26:28:54.19:1205,54,0	1/1:2,20:25:54.18:1150,54,0	1/1:4,32:36:87.30:1943,87,0	1/1:0,27:27:57.20:1273,57,0	0/0:21,0:21:63.20:0,63,989	1/1:3,14:18:48.16:1046,48,0	0/0:17,0:17:48.16:0,48,783	0/0:20,0:20:60.19:0,60,949	0/0:34,0:34:84.28:0,84,1341	1/1:3,13:16:24.08:536,24,0	0/0:24,0:24:66.21:0,66,1053	0/0:28,0:28:75.26:0,75,1219	1/1:0,24:25:60.21:1340,60,0	0/1:30,4:34:99:159,0,1093	0/0:24,0:24:72.25:0,72,1173	0/0:7,0:7:21.07:0,21,343
chr10	41695077	.	CGG	C	2816.26	PASS	AB=0.744;AC=15;AF=0.288;AN=52;BaseQRankSum=-0.396;DP=393;FS=7.140;HRun=11;HaplotypeScore=90.7199;InbreedingCoeff=0.6294;MQ=71.11;MQ0=0;MQRankSum=1.250;QD=15.73;ReadPosRankSum=6.164;VQSLOD=2.0101;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,1:28:8.39:0,8,144	./.	0/0:10,0:11:13.51:0,14,118	0/0:8,0:5:5.23:0,5,39	1/1:8,9:18:27.06:283,27,0	0/0:7,0:17:30.32:0,30,120	0/1:12,1:20:6.67:7,0,94	0/0:5,0:6:2.99:0,3,23	0/0:6,1:15:1.89:0,2,108	0/0:9,0:9:7.56:0,8,60	0/0:13,0:13:20.52:0,21,208	1/1:3,18:21:48.54:508,49,0	0/0:19,0:24:39.14:0,39,212	1/1:7,17:24:60.10:616,60,0	0/0:16,0:16:36.05:0,36,467	0/1:13,1:20:0.23:0,0,95	1/1:1,23:24:60.13:638,60,0	0/0:7,0:7:18.03:0,18,238	0/1:5,2:7:22.53:23,0,71	0/0:5,0:7:5.97:0,6,39	0/0:12,0:12:21.25:0,21,181	0/0:9,0:18:18.35:0,18,95	1/1:2,19:21:27.03:281,27,0	1/1:2,22:24:60.14:638,60,0	0/0:8,0:9:20.53:0,21,214	0/0:6,0:6:6.87:0,7,50	0/0:5,0:6:10.35:0,10,80	./.
chr10	41695087	.	GGT	G	710.43	PASS	AB=0.962;AC=9;AF=0.167;AN=54;BaseQRankSum=7.737;DP=407;FS=22.799;HRun=0;HaplotypeScore=104.1574;InbreedingCoeff=0.2737;MQ=71.14;MQ0=0;MQRankSum=-1.777;QD=5.00;ReadPosRankSum=8.968;VQSLOD=0.6472;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:59.25:0,59,433	0/0:2,0:2:2.92:0,3,17	0/0:12,0:12:20.97:0,21,240	0/0:11,0:7:3.86:0,4,152	0/1:16,1:17:67.71:68,0,96	0/0:14,0:14:28.39:0,28,171	0/0:22,0:22:51.30:0,51,397	0/0:11,0:11:18.02:0,18,177	0/0:17,0:17:30:0,30,241	0/0:6,0:6:9.02:0,9,101	0/0:14,0:14:32.89:0,33,382	1/1:19,0:19:42.04:180,42,0	0/0:21,0:21:34.23:0,34,322	0/1:22,4:26:23.75:256,0,24	0/0:13,0:13:39.12:0,39,565	0/0:17,0:17:38.47:0,38,303	0/1:26,0:26:11.47:125,0,11	0/0:10,0:10:24.01:0,24,319	0/1:8,0:8:5.87:6,0,140	0/0:4,0:4:11.88:0,12,100	0/0:14,0:14:30.03:0,30,329	0/0:19,0:19:33.98:0,34,271	0/1:22,0:22:45.83:77,0,46	1/1:24,0:23:7.30:142,7,0	0/0:11,0:11:26.93:0,27,348	0/0:8,0:8:21.03:0,21,230	0/0:10,0:10:29.98:0,30,319	./.
chr10	41695569	.	T	TG	12330.11	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=20.470;DP=720;FS=3.141;HRun=1;HaplotypeScore=101.5783;InbreedingCoeff=0.9997;MQ=85.67;MQ0=0;MQRankSum=-3.021;QD=37.71;ReadPosRankSum=4.566;VQSLOD=5.0413;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,30:32:84.28:1169,84,0	0/0:15,0:15:42.14:0,42,545	0/0:20,0:20:57.16:0,57,723	0/0:27,0:27:78.19:0,78,957	1/1:2,33:35:99:1352,99,0	0/0:28,0:28:78.25:0,78,1013	0/0:22,0:22:66.21:0,66,857	0/0:34,0:34:99:0,102,1310	1/1:0,21:21:60.20:835,60,0	1/1:0,22:22:63.20:862,63,0	1/1:0,25:25:72.23:995,72,0	0/0:23,0:23:66.21:0,66,855	1/1:0,20:20:57.19:791,57,0	1/1:1,35:36:91.19:1262,91,0	1/1:0,28:28:78.26:1084,78,0	1/1:1,24:25:63.21:881,63,0	0/0:27,0:27:78.23:0,78,995	1/1:1,21:22:52.06:716,52,0	0/0:17,0:17:51.17:0,51,662	0/0:38,0:38:99:0,111,1399	0/0:19,0:19:57.19:0,57,740	1/1:0,26:26:72.24:998,72,0	0/0:28,0:28:75.23:0,75,959	0/0:24,0:24:72.22:0,72,920	1/1:0,35:35:99:1384,99,0	0/0:32,0:32:90.29:0,90,1169	0/0:31,0:31:90.26:0,90,1150	0/0:8,0:8:24.08:0,24,312
chr10	41696793	.	A	AG	10985.28	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=7.659;DP=674;FS=8.576;HRun=4;HaplotypeScore=122.1111;InbreedingCoeff=0.9746;MQ=77.94;MQ0=0;MQRankSum=-8.465;QD=34.22;ReadPosRankSum=1.139;VQSLOD=3.4319;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,20:34:72.17:930,72,0	0/0:7,0:7:18.05:0,18,204	0/0:26,0:26:66.60:0,67,724	0/0:23,0:23:51.13:0,51,576	1/1:4,23:27:60.19:803,60,0	0/0:20,0:19:60.17:0,60,680	0/0:18,0:18:51.14:0,51,578	0/0:38,0:37:90.15:0,90,989	1/1:6,18:24:63.18:828,63,0	1/1:8,18:26:63.17:839,63,0	1/1:5,17:22:63.16:821,63,0	0/0:24,0:24:69.20:0,69,782	1/1:4,24:28:75.19:985,75,0	1/1:1,26:27:78.25:1048,78,0	1/1:5,33:38:99:1352,99,0	1/1:4,23:27:78.22:1043,78,0	0/0:35,0:35:96.27:0,96,1088	1/1:6,16:22:63.16:816,63,0	0/0:19,0:19:51.14:0,51,578	0/0:29,0:29:84.24:0,84,952	0/0:26,0:26:72.20:0,72,817	1/1:9,21:30:69.16:892,69,0	0/0:23,0:23:63.18:0,63,714	0/0:21,0:21:60.17:0,60,680	1/1:2,14:16:48.14:627,48,0	0/0:29,1:30:46.27:0,46,899	0/0:13,0:13:30.07:0,30,330	0/0:1,0:1:3.01:0,3,34
chr10	41696842	.	G	GA	10169.78	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=15.631;DP=666;FS=6.013;HRun=1;HaplotypeScore=153.5764;InbreedingCoeff=0.9957;MQ=75.18;MQ0=1;MQRankSum=-8.461;QD=34.01;ReadPosRankSum=4.676;VQSLOD=4.2042;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,29:30:68.61:922,69,0	0/0:12,0:12:36.12:0,36,497	0/0:32,0:29:76.20:0,76,951	0/0:25,0:25:63.49:0,63,773	1/1:1,33:34:77.76:1031,78,0	0/0:21,0:20:63.21:0,63,881	0/0:17,0:17:48.08:0,48,627	0/0:28,0:28:78.22:0,78,1039	1/1:1,16:17:48.13:631,48,0	1/1:7,19:25:45.92:774,46,0	1/1:3,20:23:57.11:720,57,0	0/0:26,0:26:75.25:0,75,1048	1/1:0,20:20:54.18:742,54,0	1/1:3,16:19:48.94:680,49,0	1/1:7,30:36:92.67:1270,93,0	1/1:0,33:33:90.85:1272,91,0	0/0:38,0:38:99:0,105,1464	1/1:2,13:15:36.73:533,37,0	0/0:18,0:18:54.17:0,54,731	0/0:24,0:24:72.24:0,72,1003	0/0:26,0:26:78.26:0,78,1084	1/1:5,23:28:64.55:900,65,0	0/0:20,0:20:57.19:0,57,796	0/0:27,0:27:78.24:0,78,1072	1/1:0,17:17:51.17:697,51,0	0/0:30,0:30:87.76:0,88,1214	0/0:19,0:19:51.17:0,51,712	0/0:4,0:4:12.04:0,12,168
chr10	41698031	.	GT	G	11698.58	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=17.831;DP=769;FS=5.229;HRun=8;HaplotypeScore=98.6098;InbreedingCoeff=0.9962;MQ=69.19;MQ0=0;MQRankSum=-2.814;QD=24.94;ReadPosRankSum=5.382;VQSLOD=4.8428;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,26:30:75.12:724,75,0	0/0:13,0:13:33.10:0,33,399	0/0:24,0:23:56.30:0,56,633	0/0:15,0:15:35.86:0,36,363	1/1:4,31:35:90.14:869,90,0	0/0:22,0:21:63.19:0,63,761	0/0:23,0:23:63.17:0,63,738	0/0:29,0:29:69.16:0,69,816	1/1:1,23:24:66.10:637,66,0	1/1:4,25:29:72.11:694,72,0	1/1:2,32:34:90.14:869,90,0	1/1:2,23:25:71.15:672,71,0	1/1:1,39:40:99:990,104,0	1/1:3,21:24:60.09:579,60,0	1/1:4,28:32:81.12:782,81,0	1/1:3,38:41:99:1014,105,0	1/1:2,31:33:90.14:869,90,0	1/1:3,10:14:12.66:218,13,0	0/0:30,0:30:72.20:0,72,841	0/0:41,0:42:99:0,108,1256	0/0:13,0:13:36.11:0,36,435	1/1:2,28:30:80.87:782,81,0	1/1:3,27:30:81.13:782,81,0	1/1:1,24:25:66.10:637,66,0	1/1:2,21:23:60.09:579,60,0	0/0:36,1:37:73.30:0,73,1129	0/0:37,0:37:90.25:0,90,1065	0/0:15,0:15:39.12:0,39,471
chr10	41698426	.	C	CT	932.61	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=-0.943;DP=493;FS=2.298;HRun=8;HaplotypeScore=85.7503;InbreedingCoeff=0.7837;MQ=72.65;MQ0=0;MQRankSum=0.665;QD=16.65;ReadPosRankSum=-0.336;VQSLOD=3.6954;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:43.88:0,44,399	0/0:4,0:4:5.99:0,6,51	0/0:12,0:12:14.87:0,15,170	0/1:14,0:13:11.73:12,0,129	0/0:22,0:22:60.03:0,60,544	0/0:23,0:23:56.99:0,57,515	0/0:20,0:20:51.02:0,51,467	0/0:19,0:19:38.98:0,39,349	0/0:27,0:27:66.03:0,66,598	0/0:20,0:20:60.02:0,60,539	0/0:17,0:17:50.94:0,51,450	1/1:5,12:17:36.09:405,36,0	0/0:17,0:17:39.02:0,39,354	0/0:16,0:16:39.01:0,39,351	0/0:15,0:15:39.02:0,39,353	0/0:19,0:19:48.01:0,48,430	0/0:27,0:27:69.01:0,69,625	0/0:10,0:10:27.01:0,27,243	0/0:27,0:27:63.02:0,63,577	0/0:30,1:31:46.37:0,46,666	0/0:4,0:4:11.99:0,12,105	0/0:19,0:19:46.27:0,46,412	1/1:2,18:20:48.14:554,48,0	1/1:1,4:5:9.03:104,9,0	0/0:23,0:23:68.96:0,69,608	0/0:13,0:13:33.02:0,33,302	0/0:20,0:20:45:0,45,405	0/0:13,0:13:33:0,33,298
chr10	41698529	.	T	TGGG	5850.53	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=3.003;DP=490;FS=3.304;HRun=7;HaplotypeScore=78.6052;InbreedingCoeff=0.9358;MQ=54.45;MQ0=8;MQRankSum=-1.068;QD=30.63;ReadPosRankSum=-0.444;VQSLOD=2.9482;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,13:19:27.07:497,27,0	0/0:4,0:4:9.02:0,9,123	0/0:10,0:4:12.04:0,12,161	0/0:20,0:8:23.88:0,24,256	1/1:3,9:13:27.02:425,27,0	0/0:17,0:17:48.14:0,48,638	0/0:29,0:29:75.22:0,75,1023	0/0:28,0:27:57.17:0,57,778	1/1:6,0:10:15.05:243,15,0	1/1:5,9:15:30.04:509,30,0	1/1:7,5:10:3.01:56,3,0	0/0:22,0:22:57.17:0,57,778	1/1:6,0:12:18.06:271,18,0	1/1:3,11:16:30.08:547,30,0	1/1:2,15:20:45.13:894,45,0	1/1:6,16:23:44.99:912,45,0	0/0:36,0:36:99:0,99,1295	1/1:1,14:15:36.12:747,36,0	0/0:19,0:16:42.08:0,42,547	0/0:26,0:26:72.22:0,72,981	0/0:30,0:30:81.25:0,81,1102	1/1:8,2:12:6.02:105,6,0	0/0:8,0:8:24.08:0,24,328	0/0:17,0:17:45.13:0,45,614	1/1:7,14:23:33.09:643,33,0	0/0:12,0:12:27.08:0,27,368	0/0:16,0:16:45.14:0,45,614	0/0:5,0:5:9.01:0,9,123
chr10	41699308	.	A	AT	11208.49	PASS	AB=0.806;AC=26;AF=0.464;AN=56;BaseQRankSum=-14.878;DP=583;FS=16.068;HRun=1;HaplotypeScore=55.8016;InbreedingCoeff=0.8558;MQ=80.11;MQ0=0;MQRankSum=-0.312;QD=39.75;ReadPosRankSum=2.661;VQSLOD=3.5744;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,13:13:39.13:623,39,0	0/0:8,0:8:23.97:0,24,310	0/0:16,0:16:48.15:0,48,656	0/0:13,0:13:39.12:0,39,520	1/1:0,31:31:81.28:1294,81,0	0/0:24,0:24:72.23:0,72,987	0/0:12,0:12:36.10:0,36,482	0/0:32,0:32:96.31:0,96,1323	1/1:0,18:18:54.18:863,54,0	1/1:2,25:27:81.28:1279,81,0	1/1:0,18:18:45.15:719,45,0	0/0:28,0:28:81.27:0,81,1133	1/1:1,26:27:69.24:1103,69,0	1/1:1,28:29:84.29:1342,84,0	1/1:0,25:25:69.24:1103,69,0	1/1:0,14:14:42.14:672,42,0	0/0:21,0:21:63.18:0,63,861	1/1:0,9:9:24.08:384,24,0	0/0:20,0:20:60.16:0,60,793	0/0:35,0:35:99:0,102,1426	0/0:15,0:15:45.15:0,45,625	1/1:0,21:21:54.18:863,54,0	0/0:33,0:33:99:0,99,1365	0/1:4,2:6:77.87:78,0,150	1/1:0,19:19:48.16:768,48,0	0/1:21,4:25:99:117,0,806	0/0:30,0:30:90.30:0,90,1257	0/0:14,0:14:42.14:0,42,587
chr10	41699557	.	AAC	A	5590.11	PASS	AB=0.916;AC=27;AF=0.482;AN=56;BaseQRankSum=16.264;DP=672;FS=7.022;HRun=0;HaplotypeScore=146.5257;InbreedingCoeff=0.7828;MQ=58.40;MQ0=8;MQRankSum=-1.811;QD=15.97;ReadPosRankSum=6.256;VQSLOD=4.3702;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:26:37.68:462,38,0	0/0:11,0:11:33.11:0,33,568	0/0:35,0:19:19.22:0,19,588	0/0:36,0:18:38.63:0,39,474	1/1:32,0:32:75.67:775,76,0	0/0:29,0:29:84.21:0,84,1360	0/0:20,0:20:57.16:0,57,915	0/0:39,0:39:99:0,107,1514	1/1:19,0:19:37.20:353,37,0	1/1:27,0:27:50.73:578,51,0	1/1:21,0:21:56.80:506,57,0	0/1:15,2:17:27.73:28,0,277	1/1:19,0:19:40.91:357,41,0	1/1:18,0:18:23.68:269,24,0	1/1:21,0:21:31.27:380,31,0	1/1:26,0:26:39.71:476,40,0	0/1:27,1:28:67.38:67,0,454	1/1:24,0:24:28.33:384,28,0	0/0:24,0:23:68.69:0,69,878	0/0:35,0:35:99:0,102,1701	0/0:9,0:9:24.08:0,24,406	1/1:20,0:20:46.95:414,47,0	0/1:21,3:23:13.28:13,0,399	0/0:21,1:21:28.04:0,28,434	1/1:26,0:25:58.94:528,59,0	0/0:30,0:30:37.99:0,38,1353	0/0:27,0:27:81.20:0,81,1260	0/0:5,0:4:12.04:0,12,215
chr10	41699558	.	AC	A	8858.74	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=16.149;DP=668;FS=2.566;HRun=1;HaplotypeScore=125.1085;InbreedingCoeff=0.9820;MQ=58.34;MQ0=7;MQRankSum=-2.180;QD=31.53;ReadPosRankSum=4.303;VQSLOD=4.6830;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,23:27:62.36:795,62,0	0/0:12,0:12:36.11:0,36,487	0/0:35,0:19:42.88:0,43,565	0/0:36,1:19:31.57:0,32,401	1/1:2,30:32:85.15:1128,85,0	0/0:29,0:29:84.20:0,84,1106	0/0:19,0:19:57.16:0,57,758	0/0:37,0:37:99:0,107,1290	1/1:3,17:20:49.92:639,50,0	1/1:2,24:26:68.69:868,69,0	1/1:0,20:20:57.01:728,57,0	0/0:17,0:17:32.25:0,32,237	1/1:3,16:19:45.09:587,45,0	1/1:3,15:18:40.56:490,41,0	1/1:2,19:21:48.26:623,48,0	1/1:2,24:26:61.85:783,62,0	0/0:27,0:27:38:0,38,351	1/1:3,21:24:41.54:731,42,0	0/0:23,0:23:68.68:0,69,782	0/0:34,0:34:99:0,102,1379	0/0:9,0:9:24.08:0,24,334	1/1:0,20:20:51.07:653,51,0	0/0:25,0:24:39.83:0,40,299	0/0:22,0:21:52.43:0,52,316	1/1:2,24:25:63.15:836,63,0	0/0:27,2:29:6.51:0,7,1054	0/0:27,0:27:81.22:0,81,1066	0/0:5,0:4:12.04:0,12,170
chr10	41699559	.	C	CA	2601.16	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-4.935;DP=676;FS=0.000;HRun=7;HaplotypeScore=152.4182;InbreedingCoeff=0.9755;MQ=58.14;MQ0=7;MQRankSum=-2.733;QD=27.97;ReadPosRankSum=-0.671;VQSLOD=1.3902;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:27:35.63:0,36,105	0/0:12,0:12:36.04:0,36,342	0/0:36,0:20:19.16:0,19,373	0/0:38,0:19:23.10:0,23,230	0/0:32,0:32:45.94:0,46,126	0/0:30,0:30:69.09:0,69,661	0/0:19,0:19:51.04:0,51,484	0/0:37,0:37:69.04:0,69,649	0/0:22,0:22:27.61:0,28,78	0/0:26,0:26:38.35:0,38,115	0/0:20,0:20:13.61:0,14,54	1/1:4,13:17:48.15:578,48,0	0/0:19,0:19:24.37:0,24,71	0/0:18,0:18:23.30:0,23,65	0/0:22,0:22:28.87:0,29,85	0/0:26,0:26:38.52:0,39,114	1/1:10,19:29:66.16:777,66,0	0/0:24,0:24:32.94:0,33,93	0/0:22,0:22:45.06:0,45,434	0/0:34,0:34:99:0,99,948	0/0:9,0:9:24.04:0,24,232	0/0:20,0:20:25.78:0,26,70	1/1:7,18:24:60.18:723,60,0	1/1:5,17:21:57.17:683,57,0	0/0:26,0:25:35.65:0,36,94	0/0:30,0:30:78.49:0,78,734	0/0:26,0:26:72.10:0,72,690	0/0:6,0:5:9.88:0,10,112
chr10	41699566	.	A	ACC	10927.50	PASS	AB=1.000;AC=25;AF=0.446;AN=56;BaseQRankSum=10.811;DP=637;FS=1.344;HRun=2;HaplotypeScore=130.4531;InbreedingCoeff=0.9334;MQ=57.89;MQ0=9;MQRankSum=-0.061;QD=37.68;ReadPosRankSum=2.799;VQSLOD=5.1157;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:26,3:27:66.40:1114,66,0	0/0:13,0:13:36.12:0,36,529	0/0:37,0:19:45.08:0,45,607	0/0:37,0:19:33.86:0,34,506	1/1:29,1:30:87.14:1204,87,0	0/0:26,0:26:72.24:0,72,1043	0/0:20,0:20:57.16:0,57,796	0/0:27,0:28:69.23:0,69,1007	1/1:19,2:21:60.08:833,60,0	1/1:21,2:23:67.77:1027,68,0	1/1:18,0:18:54.17:786,54,0	0/0:16,0:16:47.47:0,47,342	1/1:14,1:15:45.15:668,45,0	1/1:13,3:16:48.16:745,48,0	1/1:18,3:20:57.19:891,57,0	1/1:22,2:24:66.22:1025,66,0	0/0:29,0:29:82.94:0,83,717	1/1:20,2:22:61.75:876,62,0	0/0:15,0:15:45.13:0,45,627	0/0:33,0:33:96.30:0,96,1375	0/0:10,0:10:27.09:0,27,392	1/1:18,0:18:51.17:768,51,0	0/0:24,0:23:67.91:0,68,521	0/0:22,0:21:59.07:0,59,431	1/1:23,2:24:66.21:981,66,0	0/1:28,0:28:9:9,0,1046	0/0:28,0:28:78.25:0,78,1126	0/0:7,0:6:15.03:0,15,201
chr10	41699597	.	AAAC	A	2224.04	PASS	AB=0.977;AC=10;AF=0.179;AN=56;BaseQRankSum=5.443;DP=698;FS=0.509;HRun=0;HaplotypeScore=155.2126;InbreedingCoeff=0.8171;MQ=61.50;MQ0=13;MQRankSum=-4.273;QD=14.73;ReadPosRankSum=2.824;VQSLOD=3.4757;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:32:75.24:0,75,1466	0/0:12,0:12:30.10:0,30,598	0/0:33,0:20:3.45:0,3,434	0/1:43,0:21:0.56:1,0,362	0/0:30,0:30:75.21:0,75,1392	0/0:24,0:24:60.20:0,60,1152	0/0:21,0:21:48.16:0,48,929	0/0:29,0:29:63.22:0,63,1194	0/0:21,0:21:54.18:0,54,1015	0/0:29,0:29:75.26:0,75,1461	0/0:17,0:17:51.17:0,51,1018	1/1:3,13:15:36.11:504,36,0	0/0:21,0:21:48.16:0,48,944	0/0:18,0:18:48.15:0,48,894	0/0:33,0:32:78.27:0,78,1488	0/0:25,0:25:54.17:0,54,1018	1/1:10,21:31:26.24:611,26,0	0/0:22,0:22:47.77:0,48,906	0/1:20,1:21:1.50:2,0,687	0/0:32,0:32:75.22:0,75,1414	0/0:17,0:17:45.11:0,45,824	0/0:24,0:24:57.15:0,57,1111	1/1:1,20:21:48.16:698,48,0	1/1:3,15:17:39.13:567,39,0	0/0:24,0:23:51.17:0,51,991	0/0:31,0:31:81.28:0,81,1573	0/0:36,0:35:99:0,105,2078	0/0:14,0:12:30.10:0,30,596
chr10	41700089	.	CAAAGAAAGAAAGAAAGAAAG	C	4159.63	PASS	AB=0.897;AC=17;AF=0.327;AN=52;BaseQRankSum=1.930;DP=611;FS=27.654;HRun=0;HaplotypeScore=373.8844;InbreedingCoeff=0.1839;MQ=57.79;MQ0=1;MQRankSum=-0.968;QD=14.49;ReadPosRankSum=1.794;VQSLOD=0.5108;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:23:57.33:104,0,57	0/0:11,0:16:22.62:0,23,1253	./.	./.	0/0:25,0:25:12.03:0,12,229	0/0:16,0:23:24.08:0,24,1439	0/0:20,0:20:15.05:0,15,671	1/1:26,6:32:17.99:198,18,0	0/0:26,0:26:37.02:0,37,489	0/1:22,0:20:40.80:268,0,41	0/1:26,0:26:55.57:99,0,56	0/0:19,0:19:27.05:0,27,934	0/0:24,0:24:39.04:0,39,577	0/1:16,0:16:21.05:148,0,21	1/1:23,0:23:19.56:457,20,0	0/0:23,0:23:6.02:0,6,107	0/0:31,0:31:58.38:0,58,2433	1/1:17,0:17:13.78:197,14,0	0/1:5,6:11:2.11:641,0,2	0/1:14,12:26:99:383,0,126	0/0:8,0:8:0.89:0,1,2	0/0:25,0:25:28.92:0,29,521	0/0:26,0:25:45.15:0,45,1935	0/0:28,0:28:49.72:0,50,1401	0/1:28,0:28:98.11:549,0,98	0/1:21,11:32:98.35:829,0,98	1/1:10,9:19:3.01:159,3,0	0/1:12,0:12:63.33:128,0,63
chr10	41700125	.	G	GA	1302.66	PASS	AB=0.919;AC=15;AF=0.278;AN=54;BaseQRankSum=7.407;DP=637;FS=1.259;HRun=3;HaplotypeScore=398.4276;InbreedingCoeff=-0.3525;MQ=40.06;MQ0=2;MQRankSum=-4.978;QD=3.70;ReadPosRankSum=0.787;VQSLOD=-0.6140;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:14,0:14:1.17:1,0,282	0/0:24,0:24:21.65:0,22,440	./.	0/0:5,0:4:5.86:0,6,45	0/1:41,0:40:11.21:11,0,352	0/0:27,0:27:42.29:0,42,501	0/0:15,0:15:37.66:0,38,432	0/0:23,0:21:9.88:0,10,430	0/0:25,0:25:43.50:0,43,534	0/1:16,5:20:79.96:162,0,80	0/1:28,5:33:99:158,0,316	0/0:17,0:17:42.12:0,42,491	0/0:25,0:25:51.47:0,51,596	0/1:8,0:8:2.55:3,0,72	0/1:8,7:15:99:278,0,104	0/0:21,0:20:12.98:0,13,247	0/0:36,0:37:83.09:0,83,911	0/1:6,4:10:46.35:193,0,46	0/1:13,0:12:43.66:44,0,121	0/1:44,1:45:37.84:38,0,434	0/1:6,0:6:8.40:8,0,126	0/1:39,0:38:22.10:22,0,432	0/0:38,0:37:34.03:0,34,811	0/0:25,0:25:56.45:0,56,642	0/1:22,12:34:99:396,0,227	0/1:31,0:30:64.43:64,0,393	0/1:29,0:28:3.95:4,0,318	0/1:10,0:13:65.32:65,0,113
chr10	41700127	.	A	AG	906.91	PASS	AB=0.894;AC=11;AF=0.196;AN=56;BaseQRankSum=4.455;DP=644;FS=14.456;HRun=0;HaplotypeScore=384.5532;InbreedingCoeff=-0.2425;MQ=41.12;MQ0=2;MQRankSum=-2.286;QD=4.00;ReadPosRankSum=-0.974;VQSLOD=2.3388;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:12,2:14:11.54:0,12,333	0/0:22,1:24:50.01:0,50,667	0/0:4,0:1:1.82:0,2,5	0/0:9,0:7:5.88:0,6,38	0/0:30,10:39:46:0,46,610	0/0:26,0:26:68.40:0,68,738	0/0:17,0:17:40.67:0,41,533	0/1:23,0:21:64.86:65,0,526	0/0:20,5:25:35.05:0,35,518	0/1:18,4:21:73.36:73,0,183	0/0:27,6:33:7.88:0,8,503	0/0:19,0:19:48.07:0,48,624	0/0:22,3:25:48.92:0,49,538	0/0:7,1:8:15.26:0,15,157	0/1:14,2:16:99:120,0,168	0/1:15,5:19:30.52:31,0,288	0/0:36,0:36:99:0,104,1227	0/1:9,1:10:61.02:61,0,68	0/1:12,0:12:99:120,0,147	0/0:43,2:45:23.09:0,23,579	0/1:5,1:6:25.65:26,0,157	0/1:34,6:39:12.94:13,0,433	0/0:38,0:37:99:0,99,1159	0/0:25,0:25:61.08:0,61,817	0/1:23,10:33:99:179,0,268	0/1:30,1:30:99:206,0,419	0/0:27,2:28:32.98:0,33,477	0/1:12,1:13:99:160,0,105
chr10	41700131	.	A	AG	124.76	PASS	AB=0.879;AC=11;AF=0.196;AN=56;BaseQRankSum=5.298;DP=670;FS=13.108;HRun=0;HaplotypeScore=413.3203;InbreedingCoeff=-0.0663;MQ=40.87;MQ0=2;MQRankSum=-3.987;QD=0.66;ReadPosRankSum=-2.562;VQSLOD=0.5270;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:13,2:15:24.25:0,24,272	0/0:21,1:24:59.71:0,60,691	1/1:6,0:4:5.04:35,5,0	0/0:11,0:8:11.08:0,11,104	0/0:32,10:41:25.82:0,26,559	0/0:23,0:27:69.52:0,70,723	0/0:16,0:17:43.69:0,44,585	0/0:28,0:26:56.77:0,57,772	0/0:20,5:25:39.77:0,40,548	0/1:16,5:20:17.96:18,0,113	0/0:29,6:35:28.59:0,29,475	0/0:19,0:19:28.59:0,29,416	0/1:20,5:25:14.13:14,0,619	0/1:11,1:12:63.30:63,0,72	0/1:13,2:15:6.98:7,0,252	0/0:20,4:23:4.93:0,5,356	0/0:33,0:33:92.48:0,92,632	0/0:8,1:9:13.20:0,13,157	0/1:11,1:13:28.58:29,0,143	0/0:37,2:48:59.80:0,60,656	0/1:7,0:7:24.87:25,0,175	0/1:33,8:40:19.74:20,0,519	0/0:39,0:38:76.74:0,77,787	0/0:26,0:26:54.59:0,55,571	0/1:23,10:33:46.88:47,0,264	0/0:26,1:30:49.04:0,49,542	0/0:25,2:28:31.21:0,31,497	0/1:10,1:13:13.10:13,0,102
chr10	41700132	.	A	AG	1842.58	PASS	AB=0.927;AC=18;AF=0.321;AN=56;BaseQRankSum=10.450;DP=686;FS=31.980;HRun=1;HaplotypeScore=438.9133;InbreedingCoeff=-0.3141;MQ=40.39;MQ0=2;MQRankSum=-6.785;QD=4.22;ReadPosRankSum=2.351;VQSLOD=-0.2729;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:15,0:15:93.24:93,0,195	0/0:25,1:26:5.46:0,5,468	0/1:8,0:5:3.98:4,0,31	0/0:11,0:8:14.83:0,15,150	0/1:41,1:41:71.04:71,0,304	0/0:27,0:27:30.17:0,30,489	0/0:17,0:17:43.38:0,43,545	0/0:29,0:27:70.91:0,71,798	0/0:25,0:25:44.38:0,44,578	1/1:13,8:20:12.27:343,12,0	0/1:26,8:34:99:252,0,312	0/0:20,0:20:52.38:0,52,630	0/0:25,0:25:39.50:0,39,627	0/1:12,0:12:62.30:76,0,62	0/1:12,2:14:99:179,0,200	0/1:24,0:23:16.82:17,0,263	0/0:35,1:36:92.11:0,92,1087	0/1:7,2:9:93.35:118,0,93	0/1:15,0:14:76.51:77,0,113	0/1:45,2:48:99:116,0,431	0/0:7,0:7:18.02:0,18,220	0/1:35,3:39:99:124,0,347	0/1:40,0:41:61.07:61,0,860	0/0:25,0:26:61.20:0,61,629	0/1:23,10:33:99:385,0,182	0/1:35,1:36:42.43:42,0,416	0/1:30,2:31:32.15:32,0,392	0/1:10,1:11:16.64:17,0,73
chr10	41700135	.	A	AG	199.22	PASS	AB=0.834;AC=12;AF=0.214;AN=56;BaseQRankSum=5.694;DP=691;FS=51.094;HRun=0;HaplotypeScore=413.1428;InbreedingCoeff=-0.2611;MQ=41.39;MQ0=2;MQRankSum=-6.495;QD=0.65;ReadPosRankSum=-3.190;VQSLOD=0.0333;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:14,2:16:29.67:30,0,239	0/0:27,0:27:18.27:0,18,644	0/0:11,0:7:17.92:0,18,215	0/0:12,0:9:19.58:0,20,195	0/1:29,12:40:15.64:16,0,455	0/0:26,0:26:70.69:0,71,750	0/0:17,0:17:43.69:0,44,588	0/0:29,0:27:49.01:0,49,892	0/0:19,5:24:39.98:0,40,562	0/1:16,5:20:25.29:25,0,90	0/1:27,8:35:52.73:53,0,419	0/0:20,0:20:32.64:0,33,702	0/1:21,5:26:3.56:4,0,606	0/1:6,5:11:49.81:72,0,50	0/1:11,2:13:9.09:9,0,190	0/1:14,8:21:23.58:24,0,278	0/0:34,0:34:85:0,85,1122	0/0:9,1:10:14.10:0,14,168	0/0:15,0:14:10.73:0,11,207	0/0:48,0:48:71.22:0,71,757	0/0:7,0:7:16.25:0,16,190	0/1:30,8:37:11.22:11,0,494	0/0:42,0:41:66.68:0,67,1217	0/0:27,0:27:51.90:0,52,736	0/1:24,10:34:58.57:59,0,248	0/1:39,0:38:34.68:35,0,508	0/0:34,0:33:13.88:0,14,540	0/1:11,0:11:9.40:9,0,106
chr10	41700136	.	A	AG	2244.92	PASS	AB=0.962;AC=19;AF=0.339;AN=56;BaseQRankSum=13.644;DP=691;FS=132.411;HRun=1;HaplotypeScore=403.7535;InbreedingCoeff=-0.3646;MQ=42.49;MQ0=2;MQRankSum=-10.679;QD=4.64;ReadPosRankSum=4.467;VQSLOD=0.3841;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:14,1:16:88.24:88,0,177	0/1:26,1:27:93.36:93,0,401	0/0:12,0:8:17.98:0,18,198	0/0:12,0:9:20.65:0,21,236	0/1:29,12:40:99:204,0,276	0/1:27,0:27:36.43:36,0,459	0/0:17,0:17:40.01:0,40,505	0/0:29,0:27:65.10:0,65,863	0/0:24,0:24:40.77:0,41,564	1/1:21,0:20:8.87:305,9,0	0/1:35,0:35:99:323,0,267	0/0:20,0:20:50.72:0,51,653	0/0:25,0:25:36.63:0,37,531	0/1:7,4:11:53.05:174,0,53	0/1:13,0:13:99:144,0,197	0/1:22,0:21:22.94:23,0,279	0/0:34,0:34:88.13:0,88,1031	0/1:9,0:9:39.30:39,0,177	0/1:13,1:13:48.76:49,0,144	0/1:49,0:49:99:182,0,403	0/0:7,0:7:16.25:0,16,178	0/1:38,0:37:99:160,0,359	0/1:41,0:40:9.27:9,0,897	0/0:26,0:26:35.69:0,36,583	0/1:34,0:34:99:409,0,179	0/1:40,0:39:67.99:68,0,417	0/1:34,0:33:39.86:40,0,438	0/1:12,0:12:60.87:61,0,61
chr10	41700142	.	AAAGAAGAGAAAGC	A	8506.22	PASS	AB=1.000;AC=27;AF=0.482;AN=56;BaseQRankSum=13.095;DP=719;FS=48.972;HRun=0;HaplotypeScore=548.1828;InbreedingCoeff=0.1920;MQ=43.61;MQ0=2;MQRankSum=-11.984;QD=15.84;ReadPosRankSum=4.978;VQSLOD=0.6429;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:15,0:15:4.67:438,0,5	0/1:29,0:29:56.21:56,0,1510	0/0:15,0:12:19.30:0,19,630	0/0:17,0:11:26.87:0,27,538	0/1:40,0:39:7.81:629,0,8	0/1:28,0:28:22.52:23,0,1823	0/0:17,0:17:30.06:0,30,927	0/0:34,0:32:89.11:0,89,1762	1/1:22,2:24:22.09:1084,22,0	1/1:24,0:24:11.80:546,12,0	1/1:34,0:34:22.38:846,22,0	0/0:21,0:21:59.27:0,59,1161	1/1:23,1:24:27.09:1055,27,0	0/1:11,0:11:15.22:234,0,15	1/1:12,0:12:22.06:571,22,0	1/1:23,0:22:6.17:587,6,0	0/0:35,0:35:60.17:0,60,2517	1/1:9,0:9:16.37:276,16,0	0/1:15,0:14:99:120,0,287	0/1:53,0:53:99:331,0,1075	0/0:7,0:7:18.53:0,19,391	1/1:30,8:37:15.42:664,15,0	0/1:41,0:40:99:119,0,1745	0/0:23,0:23:44.88:0,45,1158	0/1:35,0:35:13.49:758,0,13	0/1:48,0:47:99:101,0,1419	0/1:34,0:33:69.53:70,0,895	0/0:12,0:12:1.28:0,1,206
chr10	41700144	.	AGAAG	A	2167.19	PASS	AB=0.992;AC=25;AF=0.446;AN=56;BaseQRankSum=15.089;DP=717;FS=47.737;HRun=0;HaplotypeScore=448.6127;InbreedingCoeff=0.3880;MQ=43.84;MQ0=3;MQRankSum=-8.997;QD=4.61;ReadPosRankSum=4.534;VQSLOD=0.4966;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:14,0:14:0.05:124,0,0	0/0:29,0:29:9.42:0,9,544	0/0:16,0:12:27.67:0,28,259	0/0:19,0:11:26.58:0,27,232	0/1:39,0:40:19.84:283,0,20	0/0:29,0:29:47.44:0,47,704	0/0:18,0:18:47.73:0,48,489	0/0:35,0:33:90.48:0,90,720	1/1:19,5:24:36.29:366,36,0	1/1:22,0:23:35.99:193,36,0	1/1:32,0:33:37.13:263,37,0	0/0:23,0:23:58.57:0,59,471	1/1:20,3:23:42.23:357,42,0	1/1:11,0:11:0.01:89,0,0	1/1:11,0:11:22.54:102,23,0	1/1:23,0:22:7.77:43,8,0	0/0:35,0:35:76.05:0,76,1115	0/1:7,0:7:2.83:34,0,3	0/1:16,0:15:11.12:11,0,113	0/1:56,0:56:47.49:47,0,436	0/0:7,0:7:18.18:0,18,116	0/1:34,1:35:1.39:192,0,1	0/1:40,0:39:32.35:32,0,713	0/0:24,0:24:51.21:0,51,485	1/1:29,0:30:33.15:201,33,0	0/1:48,0:47:6.71:7,0,477	0/1:34,0:33:12.61:13,0,214	0/0:12,0:12:3.43:0,3,74
chr10	41700145	.	GA	G	2009.01	PASS	AB=0.972;AC=22;AF=0.393;AN=56;BaseQRankSum=13.090;DP=718;FS=54.120;HRun=3;HaplotypeScore=412.4578;InbreedingCoeff=0.1163;MQ=44.04;MQ0=3;MQRankSum=-8.435;QD=4.69;ReadPosRankSum=4.953;VQSLOD=-0.2520;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:14,0:14:72.98:92,0,73	0/0:29,0:29:3.21:0,3,652	0/0:17,0:13:29.10:0,29,416	0/0:19,0:11:27.05:0,27,341	0/1:41,0:40:51.92:155,0,52	0/0:29,0:29:21.01:0,21,785	0/0:18,0:18:28.77:0,29,508	0/0:35,0:33:91.45:0,91,1245	1/1:24,0:24:16.67:245,17,0	0/1:21,0:23:10.27:127,0,10	0/1:31,0:33:19.29:183,0,19	0/1:20,0:23:25.30:25,0,557	1/1:23,0:23:34.23:262,34,0	0/1:9,0:9:27.27:27,0,28	1/1:9,0:11:11.42:121,11,0	0/1:23,0:22:1.98:165,0,2	0/0:36,1:37:45.82:0,46,1152	0/1:7,0:7:8.86:86,0,9	0/0:16,0:15:30.21:0,30,320	0/1:54,1:55:44.37:44,0,772	0/0:7,0:7:18.49:0,18,238	1/1:36,0:35:21.04:219,21,0	0/1:38,2:39:99:164,0,753	0/1:19,5:24:80.16:80,0,505	1/1:28,0:30:12.70:182,13,0	0/0:48,1:48:32.13:0,32,981	0/0:34,0:33:9.48:0,9,585	0/1:12,0:12:14.01:14,0,130
chr10	41700146	.	AAGAG	A	2164.62	PASS	AB=0.986;AC=28;AF=0.500;AN=56;BaseQRankSum=17.560;DP=720;FS=2.219;HRun=0;HaplotypeScore=448.9856;InbreedingCoeff=0.3082;MQ=43.93;MQ0=3;MQRankSum=-9.708;QD=4.14;ReadPosRankSum=6.502;VQSLOD=0.4766;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:15,0:15:15.13:15,0,27	0/1:30,0:30:55.98:56,0,1041	0/0:17,0:14:41.85:0,42,787	0/0:19,0:11:18.01:0,18,566	0/1:41,0:40:31.85:353,0,32	0/1:29,0:29:5.34:5,0,1331	0/0:17,0:17:38.80:0,39,833	0/0:37,0:35:97.11:0,97,2064	1/1:24,0:24:37.51:190,38,0	1/1:23,0:23:27.41:151,27,0	1/1:33,0:33:19.89:251,20,0	0/0:21,0:22:51.57:0,52,938	1/1:23,0:23:38.78:174,39,0	0/1:9,0:9:4.40:4,0,7	1/1:11,0:11:19.77:61,20,0	1/1:23,0:22:17.78:65,18,0	0/0:37,0:38:32.41:0,32,1868	1/1:7,0:7:1.06:17,1,0	0/0:16,0:15:14.18:0,14,415	0/1:54,1:55:99:170,0,1248	0/0:7,0:7:18.06:0,18,337	1/1:36,0:35:13.23:194,13,0	0/1:29,4:37:99:292,0,1286	0/0:23,0:23:21.30:0,21,870	1/1:30,0:30:38.74:208,39,0	0/1:50,0:49:70.60:71,0,1579	0/1:33,1:33:77.89:78,0,766	0/1:12,0:12:3.63:4,0,174
chr10	41700147	.	AG	A	5874.95	PASS	AB=0.867;AC=30;AF=0.536;AN=56;BaseQRankSum=17.273;DP=721;FS=10.160;HRun=1;HaplotypeScore=398.3855;InbreedingCoeff=0.1406;MQ=43.91;MQ0=3;MQRankSum=-13.143;QD=10.36;ReadPosRankSum=5.726;VQSLOD=2.3025;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:10,5:15:0.87:214,0,1	0/1:26,3:29:54.49:54,0,675	0/0:19,0:15:42.91:0,43,546	0/0:19,1:12:29.99:0,30,428	0/1:25,16:40:1.20:573,0,1	0/1:27,2:29:53.43:53,0,795	0/0:13,3:16:6.24:0,6,511	0/0:38,0:36:99:0,100,1424	1/1:15,9:24:37.09:549,37,0	1/1:9,9:23:12.59:397,13,0	1/1:14,12:33:40.49:591,40,0	0/1:20,2:22:53.66:54,0,630	1/1:12,10:22:46.23:547,46,0	0/1:7,2:9:7.14:83,0,7	1/1:5,6:11:26.10:300,26,0	1/1:17,6:22:0.83:364,1,0	0/0:36,2:38:19.65:0,20,1254	1/1:2,5:7:5.84:197,6,0	0/0:16,0:15:14.03:0,14,334	0/1:44,10:55:99:259,0,831	0/0:7,0:7:17.73:0,18,275	1/1:20,12:35:58.16:635,58,0	0/1:33,4:37:99:223,0,795	0/1:20,4:24:99:114,0,578	1/1:14,10:30:50.41:516,50,0	0/1:47,3:49:61.91:62,0,1083	0/1:31,3:33:38.39:38,0,642	0/1:11,1:12:51.49:51,0,136
chr10	41700148	.	GA	G	2352.52	PASS	AB=0.998;AC=23;AF=0.411;AN=56;BaseQRankSum=16.565;DP=732;FS=2.159;HRun=2;HaplotypeScore=419.1529;InbreedingCoeff=0.3344;MQ=44.85;MQ0=3;MQRankSum=-10.096;QD=5.70;ReadPosRankSum=6.498;VQSLOD=0.2634;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:15,0:15:62.77:95,0,63	0/0:29,0:29:1.64:0,2,751	0/0:19,0:15:45.14:0,45,654	0/0:21,0:13:32.30:0,32,445	0/1:42,0:41:29.74:213,0,30	0/0:30,0:30:5.73:0,6,935	0/0:16,0:16:26.28:0,26,552	0/0:37,0:35:97.56:0,98,1477	0/1:25,0:25:0.90:254,0,1	1/1:23,1:24:7.55:160,8,0	1/1:33,2:35:16.90:288,17,0	0/0:22,0:22:21.65:0,22,692	1/1:23,0:23:26.18:292,26,0	0/1:12,0:12:26.28:26,0,64	1/1:11,0:11:15.35:139,15,0	1/1:23,0:22:6.09:217,6,0	0/0:38,0:38:55.62:0,56,1307	0/1:7,0:7:6.03:91,0,6	0/0:16,0:15:22.93:0,23,379	0/1:54,1:55:93.47:93,0,880	0/0:7,0:7:18.05:0,18,284	1/1:34,2:35:43.68:302,44,0	0/1:38,0:37:55.55:56,0,829	0/1:24,0:24:3.49:3,0,636	1/1:29,2:31:38.18:291,38,0	0/0:50,0:49:26.41:0,26,1181	0/0:34,0:33:24.03:0,24,706	0/1:12,0:12:23.22:23,0,137
chr10	41700151	.	AAAGC	A	3668.81	PASS	AB=0.988;AC=27;AF=0.482;AN=56;BaseQRankSum=16.986;DP=756;FS=59.635;HRun=0;HaplotypeScore=469.7490;InbreedingCoeff=0.1002;MQ=47.19;MQ0=1;MQRankSum=-11.960;QD=6.41;ReadPosRankSum=5.671;VQSLOD=-0.2895;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:18,0:18:19.86:88,0,20	0/1:28,0:28:83.38:83,0,1255	0/0:22,0:18:47.33:0,47,939	0/0:22,0:13:12.95:0,13,598	1/1:43,0:42:40.22:353,40,0	0/1:30,0:30:56.46:56,0,1497	0/0:16,0:16:31:0,31,955	0/0:35,0:34:73.25:0,73,2387	1/1:24,0:24:48.69:290,49,0	0/1:27,1:28:0.31:157,0,0	0/1:35,0:35:3.43:249,0,3	0/0:19,0:19:16.33:0,16,1145	1/1:22,1:23:52.32:325,52,0	0/1:12,2:14:9.66:127,0,10	1/1:13,0:13:25.86:162,26,0	1/1:23,0:22:48.01:304,48,0	0/0:39,0:39:1.28:0,1,1961	1/1:8,0:8:8.52:101,9,0	0/1:18,0:17:18.32:18,0,616	0/1:58,0:58:99:240,0,1569	0/0:7,0:7:18.06:0,18,487	0/1:38,0:37:8.28:232,0,8	0/1:40,0:39:99:197,0,1503	0/0:24,0:24:35.31:0,35,1162	1/1:32,0:32:31.21:323,31,0	0/1:50,0:50:99:165,0,1920	0/1:36,0:35:99:133,0,1249	0/1:13,0:13:62.64:63,0,237
chr10	41700162	.	AG	A	1406.56	PASS	AB=0.870;AC=9;AF=0.161;AN=56;BaseQRankSum=14.515;DP=727;FS=0.756;HRun=2;HaplotypeScore=417.9761;InbreedingCoeff=-0.2047;MQ=51.23;MQ0=3;MQRankSum=-9.765;QD=4.66;ReadPosRankSum=0.505;VQSLOD=-0.3651;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:16,1:17:6.28:0,6,355	0/0:27,0:27:33.66:0,34,814	0/0:26,0:22:28.61:0,29,667	0/0:28,0:17:24.38:0,24,371	0/1:23,13:35:99:463,0,333	0/0:30,0:30:61.15:0,61,1066	0/0:16,0:16:41.92:0,42,575	0/0:35,0:35:99:0,102,1393	0/0:18,0:18:47.94:0,48,646	0/1:29,6:35:99:191,0,507	0/1:24,8:32:99:296,0,386	0/0:18,0:17:45.14:0,45,671	0/0:18,0:18:53.99:0,54,712	0/0:9,0:9:13.77:0,14,301	0/0:14,1:15:2.97:0,3,388	0/0:15,0:15:30.10:0,30,442	0/0:34,0:34:63.89:0,64,1064	0/1:8,1:9:0.26:0,0,315	0/0:17,0:17:42.13:0,42,594	0/1:62,1:63:60.08:60,0,1039	0/0:7,0:7:18.06:0,18,268	0/1:32,5:36:99:227,0,519	0/1:35,2:36:99:143,0,895	0/1:18,5:23:63.58:64,0,635	0/1:27,2:30:97.64:98,0,552	0/0:51,1:52:54.94:0,55,1498	0/0:31,0:30:12.75:0,13,889	0/0:11,0:11:2.49:0,2,219
chr10	41700191	.	A	AAG	9514.21	PASS	AB=0.888;AC=25;AF=0.446;AN=56;BaseQRankSum=11.164;DP=744;FS=19.848;HRun=0;HaplotypeScore=432.4081;InbreedingCoeff=0.3434;MQ=54.88;MQ0=5;MQRankSum=-8.802;QD=19.90;ReadPosRankSum=0.891;VQSLOD=4.3447;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,13:16:36.87:722,37,0	0/1:24,1:25:74.14:74,0,680	0/0:29,0:22:46.57:0,47,544	0/0:26,0:16:23.48:0,23,349	0/1:39,14:52:60:733,0,60	0/0:26,0:26:17.70:0,18,912	0/0:15,0:15:45.11:0,45,641	0/0:32,0:32:84.15:0,84,1155	1/1:0,15:15:39.13:710,39,0	0/1:23,15:38:42.51:1045,0,43	0/1:25,10:35:79.37:712,0,79	0/0:20,0:19:53.69:0,54,722	1/1:5,17:22:53.54:935,54,0	1/1:2,10:12:13.22:524,13,0	1/1:3,16:19:44.53:904,45,0	1/1:5,10:15:20.84:533,21,0	0/0:30,0:30:44.09:0,44,970	1/1:1,6:7:20.43:336,20,0	0/0:12,0:12:27.09:0,27,413	0/1:60,0:60:99:163,0,1373	0/0:9,0:9:21.07:0,21,321	0/1:27,13:40:18.78:743,0,19	0/1:38,0:37:92.13:92,0,890	0/0:25,0:25:45.26:0,45,781	1/1:18,18:36:22.99:1172,23,0	0/0:41,0:41:90.57:0,91,1558	0/1:35,0:35:43.44:43,0,922	0/1:11,0:11:71.04:71,0,259
chr10	41700249	.	G	GAA	1991.85	PASS	AB=0.960;AC=21;AF=0.375;AN=56;BaseQRankSum=9.983;DP=491;FS=0.441;HRun=3;HaplotypeScore=305.9479;InbreedingCoeff=-0.4449;MQ=39.21;MQ0=3;MQRankSum=-5.045;QD=4.68;ReadPosRankSum=1.325;VQSLOD=-0.6460;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:8:14.88:0,15,150	0/1:13,0:13:9.42:9,0,330	0/0:10,0:7:14.84:0,15,176	0/0:8,0:3:8.88:0,9,83	0/1:26,3:31:99:204,0,446	0/1:16,0:16:49.19:49,0,398	0/1:11,1:13:63.34:63,0,274	0/1:34,0:32:21.01:21,0,694	0/0:4,0:4:9.03:0,9,113	0/1:29,3:33:99:295,0,472	0/1:22,1:24:99:192,0,373	0/1:15,0:14:15.50:162,0,15	0/1:15,0:15:13.55:14,0,339	0/1:8,0:8:29.01:29,0,127	0/0:12,0:12:3.33:0,3,261	0/1:8,1:9:33.41:33,0,190	0/1:13,0:13:4.56:92,0,5	0/0:3,0:3:6:0,6,57	0/0:14,0:14:35.78:0,36,447	0/1:50,0:49:57.48:57,0,1121	0/0:5,0:5:8.35:0,8,123	0/1:17,1:23:99:105,0,391	1/1:25,0:23:35.59:336,36,0	0/1:11,0:12:8.11:70,0,8	0/1:26,2:30:99:211,0,571	0/1:25,1:25:46.73:47,0,566	0/1:25,2:27:99:105,0,495	0/1:8,0:8:58.62:59,0,198
chr10	41700251	.	A	AG	517.78	PASS	AB=0.854;AC=13;AF=0.232;AN=56;BaseQRankSum=9.620;DP=483;FS=7.967;HRun=0;HaplotypeScore=306.3312;InbreedingCoeff=-0.3186;MQ=38.98;MQ0=3;MQRankSum=-4.290;QD=1.86;ReadPosRankSum=1.782;VQSLOD=1.1471;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:8:17.18:0,17,190	0/1:11,3:14:55.58:56,0,341	0/1:9,0:6:2.60:3,0,141	0/0:9,0:3:8.05:0,8,74	0/1:25,6:31:46.64:47,0,551	0/1:12,4:16:38.95:39,0,425	0/0:14,1:15:27.15:0,27,377	0/0:33,0:31:83.82:0,84,912	0/0:4,0:4:9.03:0,9,125	0/1:27,7:33:55.85:56,0,664	0/1:17,7:24:99:101,0,492	0/1:9,1:14:1.85:2,0,87	0/0:13,1:14:2.48:0,2,401	0/0:7,0:7:16.60:0,17,169	0/0:11,1:12:3.45:0,3,365	0/1:8,1:9:14.51:15,0,215	0/0:2,0:13:18.52:0,19,74	0/0:3,0:3:8.99:0,9,101	0/0:13,1:14:35.84:0,36,448	0/0:40,8:47:7.76:0,8,1154	0/0:5,0:5:11.53:0,12,135	0/1:21,2:23:50.16:50,0,486	0/1:1,11:21:60.52:138,0,61	0/0:4,0:12:18.08:0,18,75	0/1:22,7:29:72.72:73,0,715	0/1:22,4:25:64.95:65,0,606	0/1:23,2:25:19.06:19,0,558	0/0:6,2:8:18.30:0,18,237
chr10	41700254	.	A	AAGG	3523.97	PASS	AB=0.983;AC=29;AF=0.518;AN=56;BaseQRankSum=9.838;DP=466;FS=23.135;HRun=0;HaplotypeScore=304.8665;InbreedingCoeff=-0.6527;MQ=38.41;MQ0=3;MQRankSum=-6.986;QD=7.87;ReadPosRankSum=4.295;VQSLOD=0.9777;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:8,0:8:53.78:56,0,54	0/1:13,0:13:99:111,0,322	0/0:9,0:6:10.26:0,10,110	0/0:9,0:3:5.69:0,6,42	0/1:27,0:27:99:202,0,121	0/1:15,0:15:99:158,0,333	0/1:15,0:15:99:105,0,291	0/1:30,0:28:79.02:79,0,562	1/1:4,0:4:2.49:6,2,0	0/1:31,0:30:99:355,0,109	0/1:24,0:24:59.78:197,0,60	0/1:9,5:13:44.81:335,0,45	0/1:15,0:15:59.10:103,0,59	0/1:8,0:8:24.94:63,0,25	0/1:11,0:11:39.68:40,0,54	1/1:9,0:9:12.58:50,13,0	0/1:14,0:14:17.63:122,0,18	1/1:2,0:2:5.98:54,6,0	0/1:14,0:14:3.67:4,0,349	0/1:47,1:47:99:209,0,1034	0/1:5,0:5:1.74:2,0,90	0/1:22,0:22:80.11:115,0,80	0/1:23,0:21:81.18:172,0,81	0/1:11,1:12:30.60:108,0,31	0/1:27,0:27:72.58:312,0,73	0/1:24,1:24:99:247,0,439	0/1:24,0:24:99:107,0,389	0/1:8,0:8:99:212,0,223
chr10	41700255	.	A	AG	124.86	PASS	AB=0.844;AC=8;AF=0.143;AN=56;BaseQRankSum=8.778;DP=453;FS=8.467;HRun=0;HaplotypeScore=280.3783;InbreedingCoeff=-0.1982;MQ=38.14;MQ0=3;MQRankSum=-2.994;QD=0.76;ReadPosRankSum=3.986;VQSLOD=1.0982;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:8:17.87:0,18,161	0/0:10,1:11:3.34:0,3,313	0/0:8,0:6:12.02:0,12,135	0/0:8,0:2:5.81:0,6,52	0/0:21,5:26:24.40:0,24,406	0/1:10,2:14:21.82:22,0,333	0/0:13,1:15:23.39:0,23,384	0/1:30,0:28:19.84:20,0,656	0/0:4,0:4:6.86:0,7,49	0/0:24,6:29:19.73:0,20,473	0/1:18,6:24:68.54:69,0,335	0/1:13,1:13:27.50:28,0,132	0/0:14,1:15:15.12:0,15,274	0/0:8,0:8:21.68:0,22,155	0/0:10,1:11:11.56:0,12,256	0/1:7,1:8:13.37:13,0,120	0/0:12,0:12:21.53:0,22,156	0/0:2,0:2:5.99:0,6,48	0/0:13,0:13:33.83:0,34,369	0/0:39,8:46:43.16:0,43,1153	0/0:5,0:5:12.02:0,12,149	0/0:20,2:22:31.34:0,31,330	0/1:12,11:21:78.07:78,0,199	0/0:12,0:12:4.89:0,5,114	0/1:21,6:27:7.26:7,0,405	0/1:20,4:23:19.03:19,0,484	0/0:21,1:23:23.99:0,24,515	0/0:6,2:8:10.06:0,10,217
chr10	41700261	.	AG	A	830.40	PASS	AB=0.951;AC=18;AF=0.321;AN=56;BaseQRankSum=6.959;DP=392;FS=2.599;HRun=1;HaplotypeScore=235.5969;InbreedingCoeff=-0.3948;MQ=34.63;MQ0=2;MQRankSum=-3.470;QD=2.93;ReadPosRankSum=0.088;VQSLOD=-0.3919;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:5:11.07:0,11,151	0/0:8,0:9:7.37:0,7,262	0/0:5,0:2:3.01:0,3,41	0/0:5,0:1:2.97:0,3,20	0/1:24,0:25:52.51:53,0,146	0/1:13,1:14:8.21:8,0,329	0/1:12,1:14:66.32:66,0,328	0/1:23,2:25:93.55:94,0,630	0/0:4,0:4:1.70:0,2,27	0/1:24,2:26:86.23:116,0,86	0/1:18,1:19:60.87:61,0,111	0/1:13,0:13:23.65:24,0,221	0/1:11,4:15:76.25:78,0,76	0/1:6,1:8:30.65:31,0,54	0/0:9,0:9:12.20:0,12,103	1/1:7,0:8:7.45:19,7,0	0/0:12,0:12:23.79:0,24,264	0/0:2,0:2:3.48:0,3,43	0/0:8,1:9:11.27:0,11,230	0/0:37,1:37:49.61:0,50,1038	0/1:5,0:5:9.94:10,0,73	0/1:19,1:20:73.77:94,0,74	0/1:20,0:19:51.64:52,0,293	0/0:11,0:11:17.64:0,18,214	0/1:21,0:21:40.03:47,0,40	0/1:16,0:17:21.39:21,0,353	0/1:17,2:21:99:171,0,449	0/1:8,0:8:42.11:42,0,189
chr10	41700264	.	A	AG	554.12	PASS	AB=0.854;AC=14;AF=0.250;AN=56;BaseQRankSum=8.958;DP=364;FS=15.084;HRun=0;HaplotypeScore=219.0496;InbreedingCoeff=-0.3825;MQ=34.70;MQ0=2;MQRankSum=-2.542;QD=2.40;ReadPosRankSum=1.136;VQSLOD=1.6433;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:5:15.05:0,15,196	0/1:8,1:9:50.61:51,0,222	0/0:5,0:2:2.98:0,3,21	0/0:4,0:1:2.94:0,3,18	0/0:17,4:21:3.23:0,3,471	0/1:9,4:13:99:111,0,302	0/0:13,1:14:7.76:0,8,342	0/0:26,0:24:68.10:0,68,599	0/0:4,0:4:6.02:0,6,73	0/1:17,7:23:28.12:28,0,487	0/1:14,5:19:99:101,0,323	0/0:13,0:13:34.90:0,35,308	0/1:13,2:15:10.46:10,0,340	0/1:8,0:8:24.19:24,0,124	0/1:7,1:8:29.88:30,0,190	0/1:5,1:6:23.07:23,0,109	0/0:9,0:9:17.63:0,18,202	0/0:2,0:2:6.02:0,6,84	0/0:7,0:7:17.48:0,17,192	0/1:28,7:34:99:114,0,822	0/0:4,0:4:9.01:0,9,99	0/1:11,4:15:9.30:9,0,326	0/1:18,2:19:35.92:36,0,280	0/0:11,0:11:23.19:0,23,227	0/1:15,5:20:38.68:39,0,474	0/1:15,3:17:97.25:97,0,324	0/1:19,2:21:29.79:30,0,468	0/0:6,2:8:14.71:0,15,234
chr10	41700268	.	A	AG	245.98	PASS	AB=0.843;AC=10;AF=0.192;AN=52;BaseQRankSum=6.954;DP=294;FS=21.429;HRun=0;HaplotypeScore=170.1052;InbreedingCoeff=-0.2678;MQ=31.11;MQ0=2;MQRankSum=0.222;QD=2.07;ReadPosRankSum=2.666;VQSLOD=0.8948;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:5:14.25:0,14,155	0/1:6,2:8:41.69:42,0,206	./.	./.	0/0:13,4:17:23.78:0,24,423	0/1:6,4:10:43.89:44,0,226	0/0:10,1:11:20.44:0,20,298	0/0:23,0:21:61.70:0,62,604	0/1:3,0:3:11.63:13,0,12	0/0:16,4:19:13.06:0,13,451	0/1:12,4:16:51.21:51,0,226	0/0:12,0:12:35.63:0,36,370	0/1:11,2:13:38.40:38,0,148	0/1:5,0:5:10.21:10,0,104	0/0:7,0:7:14.90:0,15,148	0/1:3,1:4:23.29:23,0,86	0/0:7,0:7:12.04:0,12,166	0/0:2,0:2:6.02:0,6,83	0/0:6,0:6:14.84:0,15,176	0/1:24,7:31:57.33:57,0,791	0/0:4,0:4:9.02:0,9,102	0/1:11,2:13:21.20:21,0,144	0/0:7,2:9:0.42:0,0,189	0/0:7,0:7:15.02:0,15,165	0/0:12,3:15:7.32:0,7,409	0/1:11,5:15:82.19:82,0,274	0/0:17,4:21:7.53:0,8,497	0/0:2,2:4:7.05:0,7,77
chr10	41700613	.	T	TC	6811.02	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=3.377;DP=631;FS=3.317;HRun=7;HaplotypeScore=90.4468;InbreedingCoeff=0.9938;MQ=85.25;MQ0=1;MQRankSum=-4.227;QD=28.26;ReadPosRankSum=3.868;VQSLOD=5.2949;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,27:32:72.22:868,72,0	0/0:4,0:4:11.97:0,12,106	0/0:34,0:29:71.11:0,71,608	0/0:23,0:23:26.25:0,26,219	0/0:25,0:25:65.49:0,65,597	0/0:19,0:19:54.07:0,54,516	0/0:16,0:16:39.03:0,39,368	0/0:31,0:31:74.96:0,75,678	1/1:2,13:15:36.11:435,36,0	1/1:1,28:29:84.26:1014,84,0	1/1:2,21:23:48.11:563,48,0	0/0:22,0:22:35.21:0,35,515	1/1:3,22:25:28.20:621,28,0	0/0:19,0:20:59.09:0,59,543	1/1:1,32:33:78.24:942,78,0	1/1:1,25:26:63.19:761,63,0	0/0:20,0:20:57.09:0,57,550	1/1:4,12:16:36.11:435,36,0	0/0:21,0:21:54.06:0,54,512	0/0:15,0:15:41.96:0,42,381	0/0:27,0:27:66.04:0,66,618	1/1:1,17:18:42.13:502,42,0	0/0:22,0:22:62.80:0,63,550	0/0:25,0:25:54.01:0,54,503	1/1:5,19:24:57.13:672,57,0	0/0:24,0:24:69.10:0,69,662	0/0:36,0:36:93.02:0,93,867	0/0:6,0:6:18.03:0,18,174
chr10	41700718	.	CT	C	16188.12	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=4.931;DP=575;FS=5.317;HRun=3;HaplotypeScore=68.6416;InbreedingCoeff=0.9965;MQ=88.21;MQ0=0;MQRankSum=-5.161;QD=34.01;ReadPosRankSum=4.205;VQSLOD=5.4535;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,29:29:87.27:1079,87,0	0/0:8,0:8:21.07:0,21,302	0/0:25,0:25:60.13:0,60,754	0/0:17,0:17:39.05:0,39,476	1/1:0,23:23:66.21:818,66,0	0/0:35,0:35:99:0,105,1511	0/0:14,0:14:42.12:0,42,586	1/1:1,34:35:99:1226,102,0	1/1:0,18:18:51.16:632,51,0	1/1:0,15:15:42.13:521,42,0	1/1:0,20:20:54.17:670,54,0	1/1:0,23:23:60.19:744,60,0	1/1:0,24:24:69.22:855,69,0	1/1:1,23:24:63.20:781,63,0	1/1:2,19:21:54.17:670,54,0	1/1:2,19:21:51.16:632,51,0	1/1:1,16:17:42.13:521,42,0	1/1:3,6:9:18.06:223,18,0	1/1:0,18:18:54.17:669,54,0	1/1:0,19:19:54.17:665,54,0	1/1:1,22:23:54.17:669,54,0	1/1:0,29:29:84.26:1035,84,0	1/1:1,13:14:39.12:483,39,0	1/1:0,10:10:24.08:298,24,0	1/1:0,17:17:48.15:595,48,0	1/1:0,20:20:60.17:730,60,0	1/1:1,35:36:99:1302,105,0	1/1:0,11:11:30.09:372,30,0
chr10	41701075	.	A	AT	3009.33	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-10.476;DP=669;FS=0.425;HRun=6;HaplotypeScore=63.4295;InbreedingCoeff=0.9977;MQ=87.74;MQ0=0;MQRankSum=-1.540;QD=31.35;ReadPosRankSum=2.473;VQSLOD=4.2423;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,117,1192	0/0:7,0:7:21.05:0,21,214	0/0:23,0:23:42.56:0,43,438	0/0:26,0:26:65.66:0,66,619	0/0:33,0:33:87.19:0,87,887	0/0:25,0:25:75.16:0,75,759	0/0:24,0:24:66.15:0,66,673	0/0:31,0:31:78.15:0,78,786	0/0:25,0:25:72.11:0,72,717	0/0:22,0:22:66.13:0,66,666	0/0:23,0:23:69.14:0,69,692	1/1:3,22:25:66.21:830,66,0	0/0:23,0:23:66.15:0,66,673	0/0:25,0:25:69.14:0,69,696	0/0:23,0:23:60.11:0,60,605	0/0:31,0:31:67.25:0,67,831	1/1:0,29:29:78.25:981,78,0	0/0:10,0:10:21.04:0,21,214	0/0:19,0:19:54.12:0,54,551	0/0:20,0:20:60.14:0,60,612	0/0:34,0:34:93.20:0,93,949	0/0:19,0:19:51.10:0,51,513	1/1:0,19:19:50.94:641,51,0	1/1:0,23:23:57.18:717,57,0	0/0:23,0:23:66.15:0,66,673	0/0:28,0:28:75.17:0,75,764	0/0:19,0:19:51.11:0,51,520	0/0:14,0:14:42.10:0,42,428
chr10	41702971	.	GTGTCTCTCTCTCTCTCTC	G	1511.18	PASS	AB=1.000;AC=17;AF=0.315;AN=54;BaseQRankSum=7.132;DP=464;FS=0.477;HRun=0;HaplotypeScore=183.0002;InbreedingCoeff=0.8438;MQ=69.76;MQ0=18;MQRankSum=-0.581;QD=14.12;ReadPosRankSum=0.761;VQSLOD=2.4930;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:18:36.36:285,36,0	0/0:5,0:5:14.83:0,15,109	0/0:30,0:17:41.25:0,41,490	0/0:43,0:23:4.03:0,4,351	0/0:21,0:21:56.83:0,57,592	0/0:19,0:18:42.77:0,43,384	0/0:18,0:17:45.70:0,46,362	0/0:27,0:25:60.20:0,60,557	1/1:13,0:13:32.95:270,33,0	0/1:12,0:12:99:205,0,155	1/1:16,0:16:32.79:258,33,0	0/0:13,0:12:32.84:0,33,258	1/1:7,0:5:14.85:108,15,0	0/0:17,0:16:21.90:0,22,385	1/1:11,0:10:26.96:222,27,0	1/1:12,0:11:26.94:231,27,0	0/0:19,0:17:46.55:0,47,404	1/1:3,0:10:3.01:54,3,0	0/0:17,0:14:39.72:0,40,316	0/0:17,0:17:41.60:0,42,497	0/0:21,0:18:38.77:0,39,585	1/1:5,0:4:8.99:74,9,0	0/0:16,0:15:41.92:0,42,342	0/0:18,0:17:35.89:0,36,352	./.	0/0:15,0:14:36.93:0,37,308	0/0:15,0:14:42.20:0,42,302	0/0:14,0:11:23.89:0,24,185
chr10	41703034	.	TCACACA	T	336.07	PASS	AB=1.000;AC=17;AF=0.354;AN=48;BaseQRankSum=3.842;DP=372;FS=28.832;HRun=0;HaplotypeScore=82.4589;InbreedingCoeff=0.3611;MQ=32.89;MQ0=88;MQRankSum=-2.639;QD=2.63;ReadPosRankSum=-0.073;VQSLOD=-0.0492;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:10:1.25:0,1,3	0/1:6,0:5:4.14:4,0,43	./.	./.	1/1:11,0:10:0.47:1,0,0	1/1:20,1:16:2.86:54,3,0	0/0:9,10:17:0.94:0,1,2	0/0:16,0:15:16.11:0,16,81	0/1:11,0:6:16.12:35,0,16	0/0:19,0:14:8.36:0,8,61	./.	1/1:3,0:2:3.01:41,3,0	1/1:17,0:12:5.98:88,6,0	0/1:16,0:14:6.04:72,0,6	./.	1/1:12,0:12:6.02:98,6,0	1/1:12,0:4:3.01:40,3,0	0/0:19,0:12:11.09:0,11,119	0/0:8,0:5:11.96:0,12,146	0/0:11,0:10:2.90:0,3,16	0/0:23,0:15:1.49:0,1,5	1/1:19,0:16:2.56:38,3,0	0/0:16,0:15:1.82:0,2,5	0/0:17,0:7:3.01:0,3,38	0/0:21,0:16:17.63:0,18,313	0/0:12,0:7:12.01:0,12,162	0/0:6,0:3:6.47:0,6,28	0/0:8,0:5:8.29:0,8,182
chr10	41703043	.	CACACACACACACACACACACACACAA	C	290.42	PASS	AB=1.000;AC=9;AF=0.173;AN=52;BaseQRankSum=-1.597;DP=414;FS=1.509;HRun=0;HaplotypeScore=159.9090;InbreedingCoeff=0.3163;MQ=37.18;MQ0=84;MQRankSum=-3.592;QD=3.98;ReadPosRankSum=-3.337;VQSLOD=1.7002;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:12:1.82:0,2,5	0/0:8,0:7:15.05:0,15,1331	./.	./.	0/0:15,0:14:0.47:0,0,1	0/0:21,0:15:2.35:0,2,130	0/0:19,0:17:2.57:0,3,270	0/0:19,0:18:30.47:0,30,993	0/0:16,0:11:0.34:0,0,47	0/0:23,0:16:17.85:0,18,943	0/1:16,0:13:0:0,0,0	1/1:4,0:3:3.01:172,3,0	0/0:17,0:13:6.02:0,6,107	0/0:15,0:13:12.04:0,12,283	0/0:17,0:14:6.02:0,6,98	0/0:14,0:14:6.02:0,6,236	1/1:10,1:4:3.01:201,3,0	0/0:20,0:14:9.99:0,10,1505	0/0:14,0:10:23.43:0,23,1122	0/1:13,0:12:7.39:7,0,313	1/1:21,0:12:4.33:13,4,0	0/0:24,0:21:4.86:0,5,98	0/0:5,13:17:1.25:0,1,3	0/0:17,0:8:2.30:0,2,196	0/0:23,0:19:38.92:0,39,3173	0/0:12,0:10:21.07:0,21,1275	0/0:6,0:4:12.04:0,12,526	0/1:8,0:6:5.44:5,0,853
chr10	41703055	.	CACACACACACACAA	C	857.76	PASS	AB=1.000;AC=26;AF=0.481;AN=54;BaseQRankSum=-0.605;DP=464;FS=5.570;HRun=0;HaplotypeScore=135.2413;InbreedingCoeff=-0.0110;MQ=40.75;MQ0=79;MQRankSum=-1.523;QD=2.89;ReadPosRankSum=-4.794;VQSLOD=0.6415;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:16:1.82:0,2,5	0/0:8,0:7:16.61:0,17,604	1/1:3,0:1:2.04:6,2,0	./.	0/0:16,0:16:0.47:0,0,1	0/0:22,0:20:14.98:0,15,236	0/0:22,0:21:1.31:0,1,269	0/1:24,0:23:74.59:75,0,394	1/1:16,0:11:0.17:53,0,0	0/1:24,0:17:28.73:29,0,289	1/1:17,0:14:0.47:1,0,0	1/1:4,0:3:3.01:100,3,0	1/1:18,0:13:6.02:105,6,0	1/1:15,0:14:9.77:140,10,0	1/1:21,0:18:5.59:55,6,0	0/0:16,0:16:4.87:0,5,17	1/1:12,0:5:5.93:116,6,0	0/1:20,0:14:51.34:51,0,474	0/0:15,0:11:6.92:0,7,480	0/1:19,0:18:99:106,0,123	0/1:22,0:14:2.02:57,0,2	0/1:24,0:23:5.26:13,0,5	0/0:17,0:16:1.25:0,1,3	0/0:13,7:11:3.01:0,3,117	0/1:26,0:22:17.69:18,0,1241	0/1:16,0:13:41.88:42,0,517	0/1:7,0:5:9.27:9,0,132	0/1:9,0:7:25.92:26,0,419
chr10	41703059	.	CACACACACAA	C	1311.09	PASS	AB=0.956;AC=29;AF=0.537;AN=54;BaseQRankSum=-0.170;DP=472;FS=4.095;HRun=0;HaplotypeScore=121.5838;InbreedingCoeff=0.0128;MQ=41.16;MQ0=77;MQRankSum=-1.186;QD=4.14;ReadPosRankSum=-4.143;VQSLOD=1.1011;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:17:1.25:0,1,3	0/0:8,0:7:16.61:0,17,367	1/1:7,0:1:2.04:6,2,0	./.	0/0:17,0:17:0.47:0,0,1	0/0:21,0:20:16.18:0,16,130	0/0:22,0:21:6.10:0,6,200	0/1:23,0:22:99:117,0,124	1/1:7,9:11:0.17:89,0,0	0/1:24,0:17:40.60:41,0,82	1/1:17,0:14:0.47:1,0,0	1/1:4,0:3:3.01:72,3,0	1/1:6,10:12:6.02:182,6,0	1/1:14,0:13:9.89:230,10,0	1/1:21,0:18:5.54:34,6,0	1/1:16,0:16:5.85:57,6,0	1/1:15,0:8:8.93:112,9,0	0/1:19,0:13:99:110,0,220	0/0:14,0:10:6.06:0,6,265	0/1:20,0:19:70.14:121,0,70	1/1:22,0:14:0.80:53,1,0	0/1:8,16:23:4.87:50,0,5	0/0:17,0:16:0.89:0,1,2	0/0:17,0:9:3.48:0,3,87	0/1:26,0:22:17.65:18,0,646	0/1:17,0:14:99:112,0,282	0/1:7,0:5:27.94:28,0,28	0/1:9,0:7:25.92:26,0,276
chr10	41703063	.	CACACAA	C	1604.78	PASS	AB=0.967;AC=33;AF=0.611;AN=54;BaseQRankSum=1.153;DP=480;FS=4.072;HRun=0;HaplotypeScore=111.0206;InbreedingCoeff=-0.1094;MQ=42.81;MQ0=69;MQRankSum=2.262;QD=4.25;ReadPosRankSum=-2.375;VQSLOD=1.8090;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:9,16:17:1.25:0,1,3	0/0:8,0:7:6.52:0,7,139	1/1:8,0:1:2.04:6,2,0	./.	0/0:19,0:19:0.46:0,0,1	0/1:10,13:22:12.31:12,0,133	0/1:22,0:21:5.27:5,0,143	0/1:23,0:22:51.08:166,0,51	1/1:15,0:11:0.17:51,0,0	1/1:22,0:16:23.08:192,23,0	1/1:16,0:14:0.47:1,0,0	1/1:4,0:3:3.01:44,3,0	1/1:15,0:12:6.02:112,6,0	1/1:17,0:16:9.87:147,10,0	1/1:22,0:19:3.74:31,4,0	1/1:1,16:17:6.02:134,6,0	1/1:15,0:8:8.93:84,9,0	0/1:18,0:13:10.57:114,0,11	0/1:15,0:11:44.65:45,0,84	0/1:20,0:19:20.50:121,0,21	0/1:22,0:14:7.96:52,0,8	0/1:24,0:23:5.20:49,0,5	0/0:17,0:16:1.82:0,2,5	0/0:15,0:9:3.01:0,3,55	0/1:26,0:22:99:110,0,134	0/1:18,0:15:90.21:190,0,90	1/1:7,0:5:7.02:54,7,0	0/1:9,0:7:25.92:26,0,129
chr10	41703067	.	CAA	C	2092.89	PASS	AB=0.917;AC=34;AF=0.654;AN=52;BaseQRankSum=3.883;DP=487;FS=7.358;HRun=3;HaplotypeScore=100.9546;InbreedingCoeff=0.2873;MQ=45.24;MQ0=62;MQRankSum=2.386;QD=6.21;ReadPosRankSum=2.966;VQSLOD=0.1048;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	0/0:7,0:7:3.07:0,3,46	1/1:14,0:3:1.91:6,2,0	./.	0/0:18,0:18:0.47:0,0,1	0/0:23,1:23:10.29:0,10,167	0/0:24,0:23:0.70:0,1,178	0/1:8,14:21:46.27:171,0,46	0/1:15,0:11:0.41:16,0,0	1/1:6,15:16:33.01:314,33,0	0/0:3,16:17:0.47:0,0,1	1/1:3,0:3:2.90:16,3,0	1/1:14,1:12:5.97:45,6,0	1/1:17,0:16:7.90:41,8,0	1/1:4,18:20:5:33,5,0	1/1:17,0:17:6.01:59,6,0	1/1:14,0:7:8.79:56,9,0	1/1:17,0:13:34.20:301,34,0	0/1:16,1:11:2.59:74,0,3	1/1:21,0:20:26.26:171,26,0	0/1:20,0:14:15.21:69,0,15	0/1:23,0:22:4.67:13,0,5	0/1:16,0:16:0:0,0,0	0/0:14,0:9:2.98:0,3,21	1/1:27,0:23:43.66:429,44,0	1/1:17,0:15:34.65:271,35,0	1/1:10,0:7:13.06:101,13,0	1/1:8,0:6:5.55:40,6,0
chr10	41703069	.	AACACACAC	A	656.98	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=4.375;DP=492;FS=27.628;HRun=0;HaplotypeScore=123.1125;InbreedingCoeff=0.5291;MQ=45.52;MQ0=56;MQRankSum=-2.518;QD=4.66;ReadPosRankSum=-1.836;VQSLOD=0.5354;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:17:0:0,0,0	0/0:7,0:7:14.92:0,15,371	0/0:18,0:4:8.89:0,9,60	0/0:22,0:1:3:0,3,25	1/1:4,14:18:21.17:135,21,0	0/0:24,0:23:22.32:0,22,349	0/0:24,0:23:35.35:0,35,510	0/0:23,0:22:24.69:0,25,234	0/1:16,0:12:18.05:51,0,18	0/0:21,0:16:10.34:0,10,108	1/1:18,0:17:1.25:3,1,0	1/1:3,0:3:3.01:54,3,0	1/1:15,0:12:6.02:116,6,0	1/1:6,12:17:14.78:280,15,0	0/0:21,0:19:0.88:0,1,2	1/1:17,0:17:6.01:62,6,0	1/1:13,0:7:3.01:54,3,0	0/0:15,0:13:5.65:0,6,222	0/0:17,0:11:18.04:0,18,278	0/0:22,0:21:2.25:0,2,113	0/0:19,0:14:1.43:0,1,21	1/1:22,0:22:3.67:57,4,0	0/0:17,0:16:0:0,0,0	0/0:13,0:9:3.01:0,3,71	0/0:26,0:22:41.20:0,41,741	0/0:18,0:16:18.52:0,19,337	0/0:10,0:7:4.77:0,5,33	0/0:8,0:6:9.01:0,9,290
chr10	41703673	.	AGGTATACTGTCAAGTGCTG	A	22747.67	PASS	AB=0.742;AC=24;AF=0.429;AN=56;BaseQRankSum=17.199;DP=602;FS=10.182;HRun=0;HaplotypeScore=298.0683;InbreedingCoeff=0.8406;MQ=83.98;MQ0=0;MQRankSum=-16.438;QD=88.51;ReadPosRankSum=7.067;VQSLOD=3.2352;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,9:10:12.04:651,12,0	0/0:7,0:7:21.07:0,21,1937	0/0:26,0:26:64.50:0,64,3599	0/0:17,0:17:42.05:0,42,2264	1/1:0,19:19:33.11:1729,33,0	0/0:23,0:23:69.22:0,69,5737	0/0:25,0:25:75.24:0,75,5999	0/0:30,0:30:87.29:0,87,6082	1/1:0,15:15:36.12:1955,36,0	1/1:1,26:27:60.21:3103,60,0	1/1:2,19:21:39.13:1998,39,0	0/0:27,0:27:78.25:0,78,6811	1/1:1,19:20:39.61:2119,40,0	1/1:0,21:21:39.13:2117,39,0	0/1:1,27:28:99:2963,0,217	1/1:0,17:17:36.12:1866,36,0	0/0:18,0:18:51.18:0,51,4005	1/1:0,7:7:9.03:443,9,0	0/0:19,0:19:54.16:0,54,3585	0/0:33,0:33:96.33:0,96,8133	0/0:18,0:18:54.19:0,54,4967	1/1:0,18:18:36.12:1955,36,0	0/0:30,0:30:87.26:0,87,6608	0/0:26,0:26:78.22:0,78,5805	1/1:0,16:16:33.11:1792,33,0	0/1:37,1:38:57.61:58,0,7862	0/0:37,0:37:99:0,108,9462	0/0:9,0:9:27.01:0,27,1221
chr10	41704980	.	A	AAGAAACC	13555.29	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=4.582;DP=603;FS=17.972;HRun=0;HaplotypeScore=135.1681;InbreedingCoeff=0.9211;MQ=91.24;MQ0=0;MQRankSum=-15.987;QD=66.12;ReadPosRankSum=2.772;VQSLOD=4.2279;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,13:24:42.14:1497,42,0	0/0:18,0:18:51.16:0,51,1169	0/0:34,0:34:81.11:0,81,1767	0/0:22,0:22:53.95:0,54,1073	0/0:35,0:35:90.29:0,90,2146	0/0:27,0:27:72.25:0,72,1780	0/0:18,0:18:42.11:0,42,869	0/0:33,0:33:84.29:0,84,2085	1/1:4,10:18:30.10:1160,30,0	1/1:4,13:20:48.16:1777,48,0	1/1:1,11:14:33.11:1220,33,0	0/0:21,0:21:51.18:0,51,1247	1/1:6,10:24:39.13:1458,39,0	0/0:32,0:32:72.25:0,72,1698	1/1:9,21:31:69.24:2470,69,0	1/1:2,12:15:30.10:1165,30,0	0/0:15,0:15:45.14:0,45,1024	1/1:1,6:9:18.06:699,18,0	0/0:26,0:26:60.21:0,60,1483	0/0:33,0:33:90.29:0,90,2146	0/0:16,0:16:45.08:0,45,963	1/1:3,12:17:36.12:1354,36,0	0/0:15,0:15:38.87:0,39,972	0/0:16,0:16:48.16:0,48,1193	1/1:1,6:10:18.06:699,18,0	0/1:23,0:23:56.45:56,0,1233	0/0:25,0:25:75.26:0,75,1871	0/0:12,0:12:33.11:0,33,823
chr10	41705223	.	CACACACACACACACACACACACATACACACACACTA	C	485.90	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-0.581;DP=453;FS=7.114;HRun=0;HaplotypeScore=272.9267;InbreedingCoeff=0.4460;MQ=44.86;MQ0=23;MQRankSum=-2.905;QD=40.49;ReadPosRankSum=-0.497;VQSLOD=1.4275;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:12:2.06:0,2,15	0/0:11,0:9:24.07:0,24,2095	0/0:9,0:3:5.93:0,6,191	0/0:13,0:5:13.86:0,14,553	0/0:26,0:26:29.21:0,29,2252	0/0:12,0:12:21.06:0,21,1394	0/0:22,0:19:45.14:0,45,3037	0/0:15,0:14:39.13:0,39,2219	0/0:9,0:9:3.48:0,3,157	0/0:14,0:13:37.30:0,37,1440	0/0:11,0:10:12.51:0,13,779	0/0:23,0:23:42.99:0,43,2336	0/0:12,0:11:7.57:0,8,321	0/0:11,0:11:13.45:0,13,791	0/0:13,0:10:3.48:0,3,210	1/1:2,10:12:6.02:566,6,0	0/0:13,0:12:23.95:0,24,1481	0/0:10,0:8:18.02:0,18,1423	0/0:13,0:13:31.91:0,32,1649	0/0:19,0:18:33.11:0,33,2672	0/0:39,0:34:63.63:0,64,5186	0/0:16,0:16:24.05:0,24,1685	0/0:23,0:21:26.97:0,27,2702	0/0:31,0:29:32.64:0,33,3050	0/0:14,0:13:12.51:0,13,938	0/0:22,0:19:56.90:0,57,5095	0/0:14,0:14:34.17:0,34,2838	0/0:13,0:13:35.30:0,35,3069
chr10	41705257	.	CTA	C	362.65	PASS	AC=8;AF=0.190;AN=42;BaseQRankSum=5.262;DP=373;FS=1.033;HRun=0;HaplotypeScore=74.8695;InbreedingCoeff=0.8549;MQ=64.03;MQ0=8;MQRankSum=-5.103;QD=9.07;ReadPosRankSum=0.272;VQSLOD=2.9944;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:1,16:17:0.88:0,1,2	0/0:6,0:6:18.06:0,18,362	0/0:20,0:7:20.74:0,21,329	0/0:25,0:15:42.14:0,42,760	./.	0/0:16,0:16:45.15:0,45,879	0/0:18,0:16:47.99:0,48,809	0/0:17,0:15:42.14:0,42,847	./.	1/1:0,9:9:23.96:281,24,0	./.	0/0:21,0:21:60.15:0,60,1128	1/1:1,11:12:12.03:135,12,0	1/1:0,9:9:2.91:36,3,0	./.	1/1:10,0:10:5.97:44,6,0	0/0:8,0:8:24.05:0,24,422	./.	0/0:12,0:12:26.02:0,26,622	0/0:15,0:15:39.10:0,39,751	0/0:32,0:32:75:0,75,1254	./.	0/0:13,0:15:30.02:0,30,609	0/0:29,0:28:60.35:0,60,1068	./.	0/0:15,0:15:42.14:0,42,818	0/0:10,0:10:24.04:0,24,407	0/0:8,0:8:24.08:0,24,470
chr10	41705350	.	AC	A	1544.82	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=13.117;DP=397;FS=17.683;HRun=6;HaplotypeScore=106.3975;InbreedingCoeff=0.9780;MQ=94.29;MQ0=0;MQRankSum=-12.351;QD=21.16;ReadPosRankSum=4.910;VQSLOD=2.2793;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,7:7:20.96:172,21,0	0/0:11,0:11:33.11:0,33,524	0/0:25,0:24:57.22:0,57,1002	0/0:17,0:17:39.13:0,39,604	0/0:23,0:23:69.24:0,69,1096	0/0:11,0:11:33.11:0,33,523	0/0:21,0:21:63.21:0,63,1003	0/0:23,0:23:66.21:0,66,1008	1/1:0,4:4:11.97:99,12,0	1/1:0,10:10:30.04:284,30,0	1/1:0,3:3:8.95:66,9,0	0/0:19,0:19:57.19:0,57,911	1/1:0,10:10:26.96:224,27,0	0/0:9,0:9:24.08:0,24,383	1/1:0,8:8:23.93:187,24,0	1/1:1,7:8:20.98:179,21,0	0/0:22,0:22:60.20:0,60,958	1/1:0,4:4:11.99:106,12,0	0/0:16,0:16:48.14:0,48,720	0/0:24,0:24:72.23:0,72,1122	0/0:21,0:21:60.19:0,60,923	1/1:0,9:9:23.95:199,24,0	0/0:7,0:7:21.07:0,21,330	0/0:21,0:21:57.19:0,57,905	1/1:0,10:10:29.96:245,30,0	0/0:19,0:19:57.16:0,57,844	0/0:28,0:28:84.29:0,84,1340	0/0:7,0:7:21.02:0,21,283
chr10	41705353	.	GT	G	577.69	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=13.115;DP=392;FS=17.998;HRun=1;HaplotypeScore=110.2078;InbreedingCoeff=0.9660;MQ=91.33;MQ0=0;MQRankSum=-12.244;QD=8.02;ReadPosRankSum=5.395;VQSLOD=-0.4789;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,7:7:18.56:76,19,0	0/0:11,0:11:33.11:0,33,527	0/0:23,0:23:62.14:0,62,950	0/0:14,0:14:36.12:0,36,558	0/0:25,0:25:75.24:0,75,1169	0/0:10,0:10:30.10:0,30,476	0/0:22,0:22:66.22:0,66,1049	0/0:24,0:24:72.23:0,72,1109	1/1:0,4:4:10.63:44,11,0	1/1:0,10:10:28.11:136,28,0	1/1:0,3:3:7.09:24,7,0	0/0:19,0:19:57.19:0,57,906	1/1:0,10:10:23.81:98,24,0	0/0:11,0:11:30.03:0,30,425	1/1:0,8:8:20.92:80,21,0	1/1:0,7:7:19.07:81,19,0	0/0:22,0:22:60.16:0,60,929	1/1:0,4:4:11.07:53,11,0	0/0:17,0:17:51.15:0,51,769	0/0:24,0:24:72.24:0,72,1130	0/0:20,0:20:57.19:0,57,911	1/1:0,9:9:21.03:87,21,0	0/0:7,0:7:21.07:0,21,334	0/0:21,0:21:57.15:0,57,879	1/1:0,10:10:26.54:114,27,0	0/0:17,0:17:51.16:0,51,793	0/0:29,0:29:87.28:0,87,1363	0/0:4,0:4:12.04:0,12,192
chr10	41705363	.	GTAAAATTCT	G	4425.60	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=13.165;DP=396;FS=16.196;HRun=0;HaplotypeScore=164.3362;InbreedingCoeff=0.9750;MQ=91.03;MQ0=1;MQRankSum=-12.399;QD=60.62;ReadPosRankSum=6.142;VQSLOD=3.1236;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,7:7:21.07:443,21,0	0/0:12,0:12:36.12:0,36,1600	0/0:24,0:24:72.23:0,72,2862	0/0:13,0:13:39.12:0,39,1570	0/0:29,0:29:74.89:0,75,2786	0/0:9,0:9:27.09:0,27,1280	0/0:21,0:21:63.20:0,63,2977	0/0:26,0:26:78.22:0,78,3596	1/1:0,4:4:12.04:252,12,0	1/1:0,10:10:30.10:641,30,0	1/1:0,3:3:9.03:173,9,0	0/0:16,0:16:48.16:0,48,2387	1/1:0,10:10:27.09:566,27,0	0/0:11,0:11:33.11:0,33,1319	1/1:0,8:8:24.08:505,24,0	1/1:0,7:7:21.07:448,21,0	0/0:20,0:20:60.21:0,60,2954	1/1:0,4:4:12.04:266,12,0	0/0:15,0:15:45.15:0,45,2114	0/0:27,0:27:81.28:0,81,3901	0/0:19,0:19:54.19:0,54,2409	1/1:0,9:9:24.08:501,24,0	0/0:9,0:9:27.08:0,27,945	0/0:20,0:20:57.20:0,57,2574	1/1:0,10:10:30.10:630,30,0	0/0:20,0:20:60.20:0,60,2817	0/0:28,0:28:84.27:0,84,3974	0/0:4,0:4:12.04:0,12,608
chr10	41705380	.	TTG	T	1464.91	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.903;DP=443;FS=4.438;HRun=0;HaplotypeScore=127.6829;InbreedingCoeff=0.9891;MQ=82.79;MQ0=1;MQRankSum=-1.372;QD=39.59;ReadPosRankSum=0.522;VQSLOD=4.8559;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:39.13:0,39,759	0/0:8,0:8:24.08:0,24,487	0/0:23,0:23:66.11:0,66,1231	0/0:9,0:9:27.06:0,27,509	1/1:0,25:25:63.21:1001,63,0	0/0:13,0:13:39.13:0,39,792	0/0:22,0:22:66.23:0,66,1320	0/0:29,0:29:87.30:0,87,1757	0/0:8,0:8:24.07:0,24,450	0/0:23,0:23:69.24:0,69,1367	0/0:8,0:8:24.08:0,24,477	0/0:17,0:17:51.17:0,51,1002	0/0:10,0:10:27.09:0,27,540	1/1:0,12:12:36.12:586,36,0	0/0:12,0:12:36.12:0,36,696	0/0:15,0:14:42.14:0,42,821	0/0:20,0:20:60.21:0,60,1218	0/0:6,0:6:18.06:0,18,365	0/0:16,0:16:48.16:0,48,954	0/0:26,0:26:78.26:0,78,1550	0/0:13,0:13:39.13:0,39,792	0/0:17,0:17:45.15:0,45,893	0/0:10,0:10:30.02:0,30,524	0/0:17,0:17:48.16:0,48,957	0/0:17,0:17:51.17:0,51,1019	0/0:21,0:21:63.21:0,63,1251	0/0:25,0:25:75.26:0,75,1523	0/0:7,0:7:21.07:0,21,427
chr10	41705660	.	GA	G	1129.39	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=11.861;DP=661;FS=4.095;HRun=1;HaplotypeScore=85.6955;InbreedingCoeff=0.9888;MQ=80.29;MQ0=0;MQRankSum=-10.259;QD=19.81;ReadPosRankSum=0.890;VQSLOD=3.9074;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:69.24:0,69,1102	0/0:12,0:12:36.12:0,36,571	0/0:26,0:26:71.43:0,71,1151	0/0:23,0:23:47.56:0,48,852	0/0:39,0:39:99:0,105,1588	0/0:23,0:23:69.24:0,69,1099	0/0:22,0:22:66.20:0,66,1005	0/0:38,0:38:99:0,111,1698	0/0:15,0:15:45.14:0,45,696	0/0:30,0:30:90.31:0,90,1428	0/0:22,0:22:63.10:0,63,918	1/1:2,22:24:71.94:613,72,0	0/0:28,0:28:81.28:0,81,1286	0/0:25,0:25:72.21:0,72,1100	0/0:26,0:26:75.24:0,75,1172	0/0:40,0:40:99:0,120,1856	1/1:0,8:8:17.99:155,18,0	0/0:12,0:12:36.12:0,36,575	0/0:28,0:28:84.27:0,84,1294	0/0:19,0:19:57.18:0,57,885	0/0:26,0:26:78.27:0,78,1240	0/0:23,0:23:66.21:0,66,1001	1/1:0,18:18:50.94:425,51,0	1/1:1,6:7:11.95:93,12,0	0/0:23,0:23:63.20:0,63,969	0/0:23,0:23:69.24:0,69,1101	0/0:39,0:39:99:0,117,1837	0/0:19,0:19:54.18:0,54,862
chr10	41705663	.	TTGG	T	1742.08	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=11.645;DP=644;FS=5.321;HRun=0;HaplotypeScore=106.6736;InbreedingCoeff=0.9812;MQ=78.27;MQ0=0;MQRankSum=-11.106;QD=31.67;ReadPosRankSum=1.248;VQSLOD=4.0737;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:69.24:0,69,1700	0/0:12,0:12:36.12:0,36,887	0/0:25,0:24:72.25:0,72,1699	0/0:21,0:21:62.97:0,63,1410	0/0:37,0:37:99:0,111,2653	0/0:23,0:23:69.24:0,69,1655	0/0:21,0:21:63.20:0,63,1457	0/0:36,0:36:99:0,108,2583	0/0:14,0:14:42.14:0,42,1035	0/0:30,0:30:90.31:0,90,2181	0/0:21,0:21:57.20:0,57,1354	1/1:1,22:23:67.10:865,67,0	0/0:28,0:28:84.29:0,84,2066	0/0:23,0:23:69.24:0,69,1652	0/0:25,0:25:75.26:0,75,1741	0/0:39,0:39:99:0,117,2697	1/1:0,8:8:18.06:238,18,0	0/0:13,0:13:39.13:0,39,941	0/0:28,0:28:84.28:0,84,1927	0/0:19,0:19:57.18:0,57,1356	0/0:26,0:26:78.25:0,78,1840	0/0:22,0:22:66.11:0,66,1468	1/1:0,18:18:54.13:680,54,0	1/1:0,6:6:9.03:114,9,0	0/0:22,0:22:66.23:0,66,1588	0/0:24,0:24:72.24:0,72,1704	0/0:38,0:38:99:0,114,2682	0/0:19,0:19:54.19:0,54,1331
chr10	41705708	.	T	TGGG	2542.24	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=10.336;DP=575;FS=1.970;HRun=0;HaplotypeScore=93.7662;InbreedingCoeff=0.9939;MQ=79.97;MQ0=0;MQRankSum=-8.080;QD=57.78;ReadPosRankSum=2.768;VQSLOD=5.4969;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:66.17:0,66,1113	0/0:10,0:10:30.10:0,30,558	0/0:23,0:22:52.68:0,53,853	0/0:16,0:16:30.40:0,30,560	0/0:44,0:44:99:0,129,2242	0/0:20,0:20:57.19:0,57,1021	0/0:20,0:20:57.18:0,57,1011	0/0:30,0:30:90.29:0,90,1612	0/0:12,0:12:33.11:0,33,610	0/0:27,0:27:78.22:0,78,1386	0/0:12,0:12:33.10:0,33,585	1/1:0,14:14:42.14:899,42,0	0/0:20,0:20:57.20:0,57,1060	0/0:23,0:23:69.24:0,69,1264	0/0:27,0:27:78.27:0,78,1443	0/0:25,0:25:75.22:0,75,1328	1/1:0,7:7:15.05:324,15,0	0/0:17,0:17:51.17:0,51,926	0/0:25,0:25:75.24:0,75,1339	0/0:26,0:26:72.21:0,72,1247	0/0:13,0:13:36.12:0,36,671	0/0:21,0:21:57.20:0,57,1060	1/1:0,16:16:48.16:1027,48,0	1/1:0,7:7:21.07:451,21,0	0/0:20,0:20:60.20:0,60,1080	0/0:27,0:27:81.28:0,81,1510	0/0:38,0:38:99:0,114,2011	0/0:13,0:13:39.13:0,39,727
chr10	41706559	.	TG	T	1258.36	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.824;DP=645;FS=0.000;HRun=1;HaplotypeScore=111.2241;InbreedingCoeff=0.9997;MQ=94.35;MQ0=0;MQRankSum=-3.208;QD=32.27;ReadPosRankSum=1.428;VQSLOD=3.3580;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:72.12:0,72,1137	0/0:10,0:10:30.08:0,30,454	0/0:27,0:27:78.26:0,78,1215	0/0:32,0:32:93.05:0,93,1408	1/1:0,18:18:45.09:590,45,0	0/0:23,0:23:69.24:0,69,1099	0/0:21,0:21:63.21:0,63,1007	0/0:27,0:27:81.25:0,81,1226	0/0:23,0:23:69.24:0,69,1099	0/0:26,0:26:78.27:0,78,1244	0/0:21,0:21:63.21:0,63,1004	0/0:26,0:26:75.26:0,75,1198	0/0:31,0:31:93.29:0,93,1421	1/1:0,21:21:57.19:790,57,0	0/0:27,0:27:81.26:0,81,1271	0/0:30,0:30:90.24:0,90,1409	0/0:27,0:27:81.28:0,81,1294	0/0:22,0:22:63.17:0,63,958	0/0:17,0:17:51.16:0,51,793	0/0:17,0:17:51.13:0,51,740	0/0:26,0:26:78.24:0,78,1198	0/0:28,0:28:78.27:0,78,1239	0/0:19,0:19:57.19:0,57,901	0/0:20,0:20:60.12:0,60,879	0/0:19,0:19:57.18:0,57,885	0/0:22,0:22:66.21:0,66,1020	0/0:27,0:27:81.26:0,81,1264	0/0:13,0:13:36.12:0,36,575
chr10	41707616	.	T	TGC	3187.83	PASS	AB=0.967;AC=14;AF=0.250;AN=56;BaseQRankSum=1.224;DP=930;FS=1.507;HRun=0;HaplotypeScore=182.5955;InbreedingCoeff=0.0760;MQ=56.31;MQ0=13;MQRankSum=2.671;QD=8.76;ReadPosRankSum=4.370;VQSLOD=3.2190;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:55:99:0,147,2013	0/0:16,0:16:45.14:0,45,662	0/0:55,0:11:23.30:0,23,178	0/0:75,0:18:26.28:0,26,430	0/0:22,0:22:60.09:0,60,782	0/1:24,0:24:53.05:53,0,84	0/1:31,0:31:29.75:30,0,184	0/1:31,0:31:99:154,0,374	0/0:38,0:38:99:0,99,1445	0/0:35,0:33:93.28:0,93,1312	0/0:19,0:19:57.07:0,57,716	1/1:18,22:40:24.68:761,25,0	0/0:28,0:28:69.15:0,69,961	0/0:29,0:28:84.24:0,84,1207	0/0:39,0:38:99:0,114,1692	0/0:22,0:22:66.20:0,66,960	0/0:38,0:38:1.49:0,1,24	0/0:27,0:27:68.95:0,69,919	0/1:23,0:23:99:178,0,113	0/1:26,0:26:89.84:242,0,90	0/1:90,0:90:99:718,0,449	0/0:33,0:33:90.18:0,90,1238	0/1:10,10:20:9.26:147,0,9	1/1:10,20:30:38.64:638,39,0	0/0:34,0:34:99:0,102,1384	0/1:22,0:21:99:222,0,118	0/1:23,0:23:99:149,0,266	0/1:4,0:4:4.51:63,0,5
chr10	41707619	.	G	GTA	4766.85	PASS	AB=1.000;AC=27;AF=0.482;AN=56;BaseQRankSum=-0.543;DP=924;FS=2.930;HRun=0;HaplotypeScore=174.5011;InbreedingCoeff=-0.3346;MQ=56.87;MQ0=12;MQRankSum=1.161;QD=6.82;ReadPosRankSum=-0.485;VQSLOD=4.6990;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:53,0:52:19.57:20,0,384	0/0:17,0:17:48.13:0,48,683	0/0:58,0:12:21.09:0,21,156	0/0:74,0:18:25.74:0,26,372	0/1:21,0:21:72.44:72,0,113	0/1:26,0:26:51.77:52,0,151	0/1:32,0:32:20.66:21,0,199	0/1:30,0:30:99:187,0,290	0/0:36,0:36:37.12:0,37,315	0/1:32,0:30:73.34:73,0,179	0/1:19,0:19:77.57:112,0,78	1/1:19,22:41:51:792,51,0	0/1:28,0:28:15.20:15,0,180	0/1:30,0:29:20.04:20,0,272	0/0:38,0:38:52.12:0,52,377	0/1:23,0:23:18.91:19,0,149	1/1:1,1:40:60.13:679,60,0	0/1:27,0:27:51.81:52,0,149	0/1:23,0:23:73.33:270,0,73	0/1:26,0:26:99:250,0,132	0/1:86,0:86:99:731,0,461	0/1:29,0:29:18.08:18,0,210	1/1:10,10:20:15.04:195,15,0	1/1:11,20:31:53.57:708,54,0	0/1:34,0:34:26.97:27,0,226	0/1:21,0:20:99:220,0,136	0/1:23,0:23:99:174,0,230	0/1:4,0:4:4.01:61,0,4
chr10	41709067	.	GGCT	G	619.85	PASS	AB=1.000;AC=11;AF=0.289;AN=38;BaseQRankSum=-0.213;DP=470;FS=1.673;HRun=0;HaplotypeScore=116.1522;InbreedingCoeff=0.4536;MQ=57.87;MQ0=23;MQRankSum=2.225;QD=5.00;ReadPosRankSum=1.324;VQSLOD=2.5070;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:10,0:10:9.03:0,9,143	0/0:20,0:15:5.90:0,6,40	0/0:25,0:16:2.96:0,3,19	./.	0/0:10,0:10:3.01:0,3,39	0/0:36,0:34:23.84:0,24,614	./.	0/0:25,0:24:17.42:0,17,169	0/0:16,0:14:1.25:0,1,3	./.	0/1:29,0:29:71.67:92,0,72	0/0:21,0:21:16.78:0,17,153	0/0:25,0:28:41.98:0,42,482	0/0:30,0:30:40.87:0,41,438	0/1:23,0:22:4.63:5,0,380	1/1:21,0:20:4.49:123,4,0	0/0:18,0:18:26.54:0,27,296	./.	./.	0/0:22,0:17:0:0,0,0	0/1:7,0:5:0:0,0,0	./.	1/1:20,0:20:0.78:57,1,0	./.	./.	1/1:6,13:19:25.42:363,25,0	1/1:4,1:5:9:102,9,0
chr10	41709142	.	C	CACACACAG	1877.68	PASS	AB=1.000;AC=14;AF=0.250;AN=56;BaseQRankSum=3.484;DP=596;FS=2.040;HRun=0;HaplotypeScore=214.3691;InbreedingCoeff=0.4424;MQ=47.09;MQ0=21;MQRankSum=-6.859;QD=11.05;ReadPosRankSum=-4.082;VQSLOD=1.9179;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:50.97:0,51,745	0/0:11,0:11:29.90:0,30,443	0/0:46,0:20:38.69:0,39,344	0/0:62,0:26:37.42:0,37,440	0/1:6,0:6:0:0,0,0	0/1:22,0:21:5.91:300,0,6	0/1:27,0:24:99:184,0,137	0/0:24,0:23:58.87:0,59,542	0/0:27,0:27:15.27:0,15,743	0/1:12,0:11:0.12:0,0,152	0/0:8,0:8:11.80:0,12,95	1/1:11,13:28:7.45:858,7,0	0/0:27,0:26:38.45:0,38,620	0/0:16,0:16:15.49:0,15,225	0/0:31,0:31:10.25:0,10,233	0/0:27,0:27:53.87:0,54,1263	1/1:18,0:18:4.56:315,5,0	0/0:19,0:18:14.29:0,14,240	0/0:17,0:17:35.01:0,35,368	0/0:14,0:14:15.26:0,15,298	0/0:32,0:31:44.78:0,45,457	0/0:12,0:11:17.84:0,18,295	1/1:8,1:9:8.98:151,9,0	1/1:8,10:20:5.96:89,6,0	0/1:21,0:18:54.57:120,0,55	0/0:11,0:11:13.93:0,14,247	0/0:17,0:17:33.14:0,33,307	0/1:5,0:5:12.81:13,0,73
chr10	41709144	.	C	CACACAG	1418.24	PASS	AB=0.946;AC=9;AF=0.161;AN=56;BaseQRankSum=4.870;DP=614;FS=1.283;HRun=0;HaplotypeScore=204.5020;InbreedingCoeff=0.1358;MQ=47.21;MQ0=23;MQRankSum=-6.106;QD=9.03;ReadPosRankSum=-1.342;VQSLOD=2.6399;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:50.91:0,51,711	0/0:11,0:11:29.90:0,30,405	0/0:46,0:20:41.70:0,42,386	0/0:63,0:24:40.43:0,40,481	0/1:6,0:6:0:0,0,0	0/1:22,0:21:23.87:274,0,24	0/1:28,0:25:99:178,0,139	0/0:24,0:23:61.84:0,62,557	0/0:26,0:26:54.85:0,55,670	0/0:13,0:12:2.59:0,3,155	0/0:9,0:8:14.14:0,14,82	1/1:29,0:29:17.56:534,18,0	0/0:30,0:29:50.75:0,51,612	0/0:16,0:16:32.01:0,32,237	0/0:31,0:31:15.62:0,16,210	0/0:26,0:26:62.94:0,63,1145	0/1:18,0:18:11.81:245,0,12	0/0:20,0:19:26.33:0,26,241	0/0:16,0:16:36.12:0,36,323	0/0:15,0:15:20.93:0,21,288	0/0:33,0:32:58.17:0,58,433	0/0:11,0:11:20.95:0,21,260	0/1:4,4:10:13.12:115,0,13	0/1:23,0:21:36.87:94,0,37	0/1:21,0:18:75.80:115,0,76	0/0:12,0:12:6.18:0,6,239	0/0:20,0:20:34.81:0,35,267	0/0:7,0:7:7.62:0,8,46
chr10	41709231	.	T	TA	2682.95	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-4.966;DP=622;FS=3.868;HRun=8;HaplotypeScore=69.9838;InbreedingCoeff=0.9784;MQ=67.81;MQ0=0;MQRankSum=-0.198;QD=27.10;ReadPosRankSum=0.578;VQSLOD=4.3570;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:84:0,84,762	0/0:10,0:10:24.01:0,24,220	0/0:15,0:15:14.40:0,14,188	0/0:19,0:18:7.91:0,8,240	1/1:5,15:20:48.11:540,48,0	0/0:30,0:30:87.03:0,87,791	0/0:23,0:23:63.01:0,63,571	0/0:38,0:38:90.03:0,90,819	1/1:2,19:21:48.14:554,48,0	0/0:19,0:19:45.02:0,45,412	0/0:17,0:17:39.01:0,39,357	0/0:28,0:28:66.04:0,66,602	1/1:3,21:24:66.20:761,66,0	1/1:2,18:21:56.99:627,57,0	0/0:34,0:34:96.02:0,96,867	0/0:23,0:23:56.99:0,57,511	0/0:40,0:40:99:0,102,933	0/0:25,0:25:72.04:0,72,658	0/0:15,0:15:36.02:0,36,329	0/0:18,0:18:51.03:0,51,467	0/0:25,0:25:57.03:0,57,521	1/1:1,12:13:33.10:377,33,0	0/0:12,0:12:30.01:0,30,275	0/0:22,0:21:45.01:0,45,411	0/0:24,0:24:69.02:0,69,627	0/0:18,0:18:50.97:0,51,454	0/0:18,0:17:51.03:0,51,466	0/0:17,0:17:51.03:0,51,466
chr10	41709465	.	C	CT	1550.16	PASS	AB=0.913;AC=9;AF=0.161;AN=56;BaseQRankSum=-8.387;DP=561;FS=2.370;HRun=9;HaplotypeScore=58.6181;InbreedingCoeff=0.8771;MQ=78.56;MQ0=0;MQRankSum=-1.841;QD=16.67;ReadPosRankSum=0.366;VQSLOD=3.7337;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:31:82.99:0,83,704	0/0:13,0:13:32.99:0,33,286	0/0:17,0:18:44.54:0,45,353	0/0:19,0:19:21.02:0,21,245	0/0:20,0:20:47.96:0,48,413	0/0:21,1:23:25.81:0,26,437	0/0:27,0:27:80.98:0,81,703	0/0:29,0:29:71.95:0,72,620	0/0:17,0:17:47.95:0,48,408	0/0:20,0:20:47.99:0,48,417	0/0:20,0:20:53.98:0,54,469	1/1:1,9:10:27.07:299,27,0	0/0:17,0:17:41.98:0,42,365	0/0:20,0:20:29.17:0,29,345	0/0:35,0:35:95.96:0,96,830	0/0:21,0:21:53.97:0,54,469	1/1:5,17:22:13.05:372,13,0	0/0:24,0:24:56.97:0,57,495	0/1:19,2:21:6.37:6,0,406	0/0:13,0:13:23.98:0,24,208	0/0:21,0:21:47.95:0,48,413	0/0:16,0:16:29.11:0,29,259	1/1:1,12:13:33.09:363,33,0	1/1:4,23:27:40.12:671,40,0	0/0:17,0:17:38.97:0,39,339	0/0:20,0:20:14.76:0,15,348	0/0:15,0:15:44.99:0,45,391	0/0:12,0:12:35.99:0,36,312
chr10	41711858	.	GT	G	9570.55	PASS	AB=0.524;AC=19;AF=0.339;AN=56;BaseQRankSum=15.076;DP=660;FS=2.135;HRun=1;HaplotypeScore=66.0108;InbreedingCoeff=0.9217;MQ=82.67;MQ0=0;MQRankSum=-5.337;QD=39.88;ReadPosRankSum=5.297;VQSLOD=5.3049;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,41:41:99:1720,123,0	0/0:6,0:6:18.06:0,18,269	0/0:27,0:27:81.28:0,81,1291	0/0:20,0:20:46.77:0,47,778	0/0:34,0:34:99:0,99,1535	0/0:25,0:25:71.97:0,72,1124	0/0:14,0:14:42.11:0,42,625	0/0:36,0:36:99:0,105,1635	1/1:0,29:29:87.29:1216,87,0	1/1:0,29:29:84.28:1175,84,0	1/1:0,21:21:57.19:797,57,0	0/0:26,0:26:78.21:0,78,1196	1/1:0,21:21:60.20:838,60,0	0/0:29,0:29:87.30:0,87,1387	1/1:0,18:18:48.16:669,48,0	1/1:0,22:22:66.22:923,66,0	0/0:16,0:16:48.16:0,48,767	0/1:1,10:11:14.87:386,0,15	0/0:22,0:22:63.21:0,63,980	0/0:26,0:26:69.22:0,69,1100	0/0:22,0:22:66.23:0,66,1055	1/1:0,26:26:69.23:965,69,0	0/0:30,0:30:90.29:0,90,1413	0/0:16,0:16:48.16:0,48,767	1/1:0,22:22:63.21:881,63,0	0/0:32,1:33:57.37:0,57,1493	0/0:26,0:25:78.25:0,78,1216	0/0:12,0:12:36.12:0,36,576
chr10	41712977	.	G	GAC	168.12	PASS	AB=0.919;AC=12;AF=0.214;AN=56;BaseQRankSum=4.313;DP=543;FS=11.622;HRun=0;HaplotypeScore=109.6034;InbreedingCoeff=0.3621;MQ=66.63;MQ0=3;MQRankSum=0.110;QD=1.18;ReadPosRankSum=-0.462;VQSLOD=1.1598;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:4.68:0,5,136	0/0:12,0:12:36.12:0,36,581	0/0:38,0:25:47.64:0,48,794	0/0:31,0:22:51.62:0,52,768	0/0:12,0:12:24.07:0,24,355	0/0:30,0:30:84.24:0,84,1329	0/0:20,0:20:60.18:0,60,947	0/0:26,0:26:72.22:0,72,1070	0/1:20,0:20:11.80:12,0,119	0/0:21,0:20:0.94:0,1,208	0/1:12,0:12:7.24:7,0,76	1/1:14,0:14:3.48:39,3,0	0/1:17,0:17:0.77:1,0,163	0/0:20,0:20:36.12:0,36,583	0/0:30,0:30:26.28:0,26,234	0/0:20,0:20:8.42:0,8,164	0/1:1,19:19:0:0,0,0	0/0:2,0:2:5.90:0,6,37	0/0:13,0:12:36.01:0,36,539	0/0:24,0:24:62.49:0,62,807	0/0:28,0:28:75.22:0,75,1065	0/1:16,0:16:8.21:8,0,78	1/1:11,0:11:9.88:93,10,0	1/1:21,0:21:17.95:143,18,0	0/1:12,0:12:1.94:2,0,61	0/0:27,0:27:75.07:0,75,956	0/0:25,0:25:63.13:0,63,810	0/0:2,0:2:3.01:0,3,48
chr10	41712979	.	C	CTGTG	2964.63	PASS	AB=0.839;AC=38;AF=0.679;AN=56;BaseQRankSum=5.331;DP=690;FS=11.278;HRun=0;HaplotypeScore=204.3052;InbreedingCoeff=0.3141;MQ=60.15;MQ0=3;MQRankSum=0.374;QD=5.50;ReadPosRankSum=-0.907;VQSLOD=1.4461;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:24:0:0,0,0	0/0:12,0:12:15.05:0,15,241	0/0:36,0:25:1.76:0,2,161	0/0:31,0:22:6.02:0,6,89	0/0:18,0:17:0:0,0,0	0/0:29,0:31:60.18:0,60,917	0/0:20,0:21:5.13:0,5,388	0/1:19,0:30:19.17:195,0,19	1/1:32,0:30:21:284,21,0	1/1:36,0:31:45.61:774,46,0	1/1:18,0:16:2.91:24,3,0	1/1:9,1:21:5.31:111,5,0	1/1:25,0:24:12.04:231,12,0	1/1:23,0:23:6.01:69,6,0	1/1:38,0:37:18.06:347,18,0	1/1:27,0:27:12.04:225,12,0	1/1:25,0:24:8.04:80,8,0	1/1:6,0:6:1.13:45,1,0	0/1:12,0:14:22.32:22,0,63	1/1:16,0:33:24.58:111,25,0	0/1:22,0:37:97.56:98,0,110	1/1:18,0:18:6.01:79,6,0	1/1:19,0:18:3.01:69,3,0	0/1:28,0:26:0.31:1,0,0	1/1:16,0:16:3.01:68,3,0	1/1:16,0:32:33.41:148,33,0	0/1:16,0:29:43.08:85,0,43	1/1:3,0:3:3.01:57,3,0
chr10	41713406	.	ACAAT	A	4774.02	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=10.913;DP=712;FS=6.180;HRun=0;HaplotypeScore=124.4044;InbreedingCoeff=0.9998;MQ=85.77;MQ0=0;MQRankSum=-2.736;QD=45.90;ReadPosRankSum=2.558;VQSLOD=5.7012;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,114,2926	0/0:16,0:16:48.16:0,48,1315	0/0:26,0:26:69.18:0,69,1509	0/0:20,0:20:60.15:0,60,1394	0/0:15,0:15:42.09:0,42,1031	0/0:21,0:21:63.21:0,63,1671	0/0:18,0:18:51.16:0,51,1339	0/0:35,0:35:99:0,99,2626	0/0:29,0:29:87.21:0,87,2197	0/0:32,0:32:93.31:0,93,2492	0/0:27,0:27:75.26:0,75,1994	1/1:0,27:27:72.25:1394,72,0	0/0:36,0:36:99:0,105,2753	0/0:20,0:20:57.20:0,57,1512	0/0:41,0:41:99:0,123,3237	0/0:27,0:27:81.28:0,81,2210	1/1:1,24:25:60.21:1162,60,0	0/0:10,0:10:30.10:0,30,821	0/0:22,0:22:57.17:0,57,1390	0/0:27,0:27:78.24:0,78,2012	0/0:34,0:34:99:0,102,2694	0/0:17,0:17:51.14:0,51,1226	1/1:0,25:25:62.91:1193,63,0	1/1:0,27:27:54.18:1024,54,0	0/0:20,0:20:57.20:0,57,1561	0/0:21,0:21:63.19:0,63,1611	0/0:37,0:37:99:0,105,2737	0/0:19,0:19:51.18:0,51,1396
chr10	41713559	.	CA	C	13065.78	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=19.923;DP=738;FS=5.000;HRun=3;HaplotypeScore=113.8092;InbreedingCoeff=0.9983;MQ=81.73;MQ0=0;MQRankSum=-0.799;QD=33.16;ReadPosRankSum=5.011;VQSLOD=4.3322;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,36:37:90.28:1116,90,0	0/0:7,0:7:18.06:0,18,259	0/0:24,0:24:63.44:0,63,817	0/0:18,0:18:37.52:0,38,548	0/0:26,0:26:72.23:0,72,1020	0/0:27,0:27:78.25:0,78,1105	0/0:18,0:18:51.17:0,51,735	0/0:32,0:32:93.31:0,93,1324	1/1:0,24:24:66.21:818,66,0	1/1:0,33:33:96.28:1166,96,0	1/1:2,21:23:57.18:706,57,0	1/1:2,23:25:66.21:817,66,0	1/1:1,31:32:81.25:1004,81,0	0/0:29,0:29:87.29:0,87,1251	1/1:0,36:36:99:1302,105,0	1/1:2,26:28:72.23:893,72,0	1/1:1,28:29:81.25:1004,81,0	1/1:0,14:14:39.12:483,39,0	0/0:20,0:20:54.17:0,54,761	0/0:38,0:38:99:0,105,1512	0/0:26,0:26:69.21:0,69,974	1/1:0,27:27:81.25:1004,81,0	1/1:1,29:30:75.24:930,75,0	1/1:1,28:29:72.23:893,72,0	1/1:0,27:27:75.24:930,75,0	0/0:30,0:30:87.28:0,87,1234	0/0:42,0:42:99:0,126,1794	0/0:7,0:7:21.07:0,21,302
chr10	41713961	.	G	GAT	3991.46	PASS	AB=0.545;AC=7;AF=0.125;AN=56;BaseQRankSum=7.231;DP=680;FS=4.170;HRun=0;HaplotypeScore=108.2114;InbreedingCoeff=0.8361;MQ=83.30;MQ0=0;MQRankSum=-2.475;QD=48.68;ReadPosRankSum=2.661;VQSLOD=4.6665;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:69.22:0,69,997	0/0:19,0:19:51.17:0,51,750	0/0:19,0:19:54.12:0,54,742	0/0:22,0:22:51.16:0,51,707	0/0:32,0:32:90.28:0,90,1288	0/0:41,0:41:99:0,123,1783	0/0:16,0:16:42.14:0,42,619	0/0:39,0:39:99:0,114,1645	0/0:18,0:18:51.17:0,51,749	0/0:29,0:29:84.28:0,84,1222	0/0:25,0:25:72.23:0,72,1041	1/1:1,20:21:57.20:1068,57,0	0/0:18,0:18:51.17:0,51,749	0/0:24,0:24:63.21:0,63,928	0/0:37,0:37:99:0,111,1615	0/0:27,0:27:81.27:0,81,1190	1/1:0,15:15:39.13:731,39,0	0/0:10,0:10:24.04:0,24,327	0/0:22,0:22:63.14:0,63,864	0/0:37,0:37:99:0,105,1525	0/0:15,0:15:42.14:0,42,619	0/0:20,0:20:57.19:0,57,838	1/1:0,27:28:75.26:1405,75,0	0/1:3,15:18:78.39:789,0,78	0/0:26,0:26:78.26:0,78,1148	0/0:29,0:29:84.28:0,84,1236	0/0:25,0:25:72.24:0,72,1059	0/0:23,0:23:69.23:0,69,1014
chr10	41714117	.	AT	A	1400.11	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=8.223;DP=578;FS=0.000;HRun=9;HaplotypeScore=91.9755;InbreedingCoeff=0.9852;MQ=74.30;MQ0=0;MQRankSum=-0.672;QD=20.29;ReadPosRankSum=3.582;VQSLOD=3.8829;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:54.08:0,54,587	0/0:6,0:6:18.05:0,18,208	0/0:17,0:17:34.58:0,35,314	0/0:13,0:13:36.07:0,36,378	0/0:21,0:21:48.14:0,48,553	0/0:34,0:34:99:0,99,1113	0/0:18,0:18:54.16:0,54,623	0/0:37,0:36:75.19:0,75,834	0/0:18,0:19:53.98:0,54,590	0/0:19,0:19:54.16:0,54,621	0/0:19,0:19:57.13:0,57,643	1/1:2,10:12:30.02:274,30,0	0/0:23,0:23:51.13:0,51,570	0/0:22,0:22:57.17:0,57,658	0/0:23,0:23:63.16:0,63,709	0/0:19,0:19:54.15:0,54,615	1/1:2,20:22:60.03:549,60,0	0/0:27,0:27:75.18:0,75,848	0/0:18,0:18:51.11:0,51,558	0/0:26,0:26:69.20:0,69,796	0/0:20,0:20:51.15:0,51,588	0/0:17,0:17:51.15:0,51,588	1/1:0,16:16:41.90:384,42,0	1/1:4,15:19:10.40:350,10,0	0/0:14,0:14:42.12:0,42,484	0/0:30,0:30:81.24:0,81,935	0/0:29,0:28:87.18:0,87,950	0/0:19,0:19:57.17:0,57,658
chr10	41714393	.	CTA	C	2938.62	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=0.592;DP=314;FS=25.626;HRun=0;HaplotypeScore=60.3034;InbreedingCoeff=0.8964;MQ=77.59;MQ0=0;MQRankSum=-7.930;QD=27.99;ReadPosRankSum=-2.806;VQSLOD=1.5512;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,8:8:9.03:126,9,0	0/0:7,0:7:21.07:0,21,377	0/0:12,0:12:36.03:0,36,562	0/0:9,0:9:9.46:0,9,213	0/0:5,0:5:15.04:0,15,222	0/0:24,0:24:63.20:0,63,1092	0/0:15,0:15:45.15:0,45,809	0/0:30,0:30:81.28:0,81,1442	1/1:0,6:6:15.05:209,15,0	1/1:0,11:11:33.11:462,33,0	1/1:2,7:9:14.96:166,15,0	1/1:0,3:3:9.03:126,9,0	1/1:1,12:13:33.07:439,33,0	0/0:6,0:6:9.03:0,9,162	1/1:1,6:7:15.05:209,15,0	1/1:1,8:8:21.07:293,21,0	1/1:1,4:5:6.02:84,6,0	1/1:3,3:6:12.04:166,12,0	0/0:17,0:17:45.13:0,45,779	0/0:23,0:23:36.08:0,36,583	0/0:3,0:3:6.02:0,6,108	1/1:0,7:7:21.07:294,21,0	1/1:0,5:5:12.04:167,12,0	1/1:0,4:4:3.01:42,3,0	1/1:1,10:11:27.09:377,27,0	0/0:17,0:17:39.11:0,39,650	0/0:30,0:30:75.26:0,75,1332	0/0:11,0:11:18.06:0,18,323
chr10	41714409	.	G	GAT	2090.67	PASS	AB=1.000;AC=19;AF=0.679;AN=28;BaseQRankSum=-1.471;DP=278;FS=2.141;HRun=0;HaplotypeScore=69.1347;InbreedingCoeff=0.2602;MQ=65.94;MQ0=0;MQRankSum=0.348;QD=12.83;ReadPosRankSum=2.889;VQSLOD=3.0346;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:7:2.94:0,3,18	0/1:7,0:7:15.26:15,0,18	0/0:9,0:9:2.04:0,2,6	./.	./.	1/1:22,0:22:3.01:46,3,0	1/1:15,0:15:3.01:32,3,0	1/1:6,26:32:78.20:1207,78,0	./.	./.	0/0:4,0:4:0.47:0,0,1	./.	1/1:12,0:12:1.82:5,2,0	./.	./.	./.	./.	1/1:6,0:6:2.74:12,3,0	1/1:8,8:16:21.07:321,21,0	./.	0/1:3,0:3:0:0,0,0	./.	./.	./.	./.	1/1:14,0:14:17.98:225,18,0	1/1:28,0:28:17.92:193,18,0	0/1:8,0:8:4.93:129,0,5
chr10	41714420	.	A	ATATG	3390.23	PASS	AB=1.000;AC=23;AF=0.821;AN=28;BaseQRankSum=-2.910;DP=207;FS=0.000;HRun=0;HaplotypeScore=70.1114;InbreedingCoeff=0.0599;MQ=50.66;MQ0=0;MQRankSum=1.382;QD=24.22;ReadPosRankSum=-0.079;VQSLOD=3.1477;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	0/1:7,0:7:14.85:15,0,19	1/1:2,0:2:0.89:2,1,0	./.	./.	1/1:21,0:21:2.97:46,3,0	1/1:12,0:12:2.97:61,3,0	1/1:29,0:29:81.21:1724,81,0	./.	0/1:6,0:6:7.37:117,0,7	./.	./.	./.	./.	0/0:2,0:2:2.68:0,3,11	./.	1/1:6,0:6:2.38:52,2,0	1/1:6,0:6:8.99:106,9,0	1/1:8,0:8:24.08:512,24,0	./.	./.	./.	./.	./.	1/1:5,0:5:3.01:44,3,0	1/1:0,11:11:17.98:302,18,0	1/1:19,0:19:17.88:220,18,0	0/1:8,0:8:4.92:190,0,5
chr10	41714589	.	A	AC	93.17	PASS	AB=1.000;AC=11;AF=0.458;AN=24;BaseQRankSum=-0.168;DP=128;FS=4.008;HRun=1;HaplotypeScore=42.8768;InbreedingCoeff=0.5002;MQ=97.66;MQ0=8;MQRankSum=-0.887;QD=4.44;ReadPosRankSum=3.716;VQSLOD=0.8039;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/0:0,2:2:0:0,0,0	0/0:42,0:16:22.41:0,22,298	0/0:40,0:13:18.05:0,18,216	./.	1/1:0,5:5:2.44:38,2,0	1/1:1,4:5:0.37:1,0,0	0/0:1,0:1:2.04:0,2,6	./.	./.	./.	./.	./.	0/0:1,0:1:0.47:0,0,1	./.	./.	./.	./.	1/1:0,1:1:2.99:23,3,0	0/0:1,5:6:0:0,0,0	./.	0/1:1,0:1:0:0,0,0	./.	./.	./.	1/1:0,4:4:11.03:84,11,0	1/1:1,4:5:5.79:38,6,0	./.
chr10	41714592	.	G	GC	194.68	PASS	AB=1.000;AC=22;AF=0.500;AN=44;BaseQRankSum=-0.310;DP=185;FS=6.765;HRun=0;HaplotypeScore=81.6050;InbreedingCoeff=0.4662;MQ=84.69;MQ0=8;MQRankSum=-2.188;QD=3.36;ReadPosRankSum=2.108;VQSLOD=2.5344;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:4,0:2:0:0,0,0	0/0:0,0:2:0:0,0,0	0/0:50,0:17:41.79:0,42,495	0/0:41,0:13:21.51:0,22,238	1/1:2,0:2:0.47:1,0,0	1/1:0,0:5:5.45:82,5,0	1/1:0,1:5:0.37:1,0,0	0/0:1,0:1:2.04:0,2,6	1/1:6,0:6:4.31:18,4,0	0/1:6,0:6:0.26:10,0,0	1/1:2,0:2:0.33:0,0,0	./.	0/0:3,0:3:1.71:0,2,9	0/0:1,0:1:0.47:0,0,1	0/0:7,0:7:5.96:0,6,25	0/1:3,0:3:0:0,0,1	./.	0/0:4,0:2:5.67:0,6,29	1/1:1,1:2:5.20:30,5,0	1/1:3,4:9:3.07:25,3,0	./.	0/1:4,0:4:0.02:0,0,0	./.	./.	0/0:4,0:4:0.94:0,1,3	1/1:0,3:4:11.64:91,12,0	1/1:2,4:6:8.69:53,9,0	./.
chr10	41714596	.	CG	C	277.76	PASS	AB=0.857;AC=23;AF=0.605;AN=38;BaseQRankSum=-0.344;DP=197;FS=1.115;HRun=1;HaplotypeScore=37.3270;InbreedingCoeff=0.4233;MQ=80.41;MQ0=9;MQRankSum=-0.797;QD=4.15;ReadPosRankSum=0.445;VQSLOD=0.3061;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/0:0,2:2:0:0,0,0	0/0:52,1:18:46.10:0,46,420	0/0:40,2:12:12.03:0,12,122	./.	1/1:2,5:7:4.85:63,5,0	1/1:0,5:5:0.38:1,0,0	1/1:0,1:1:2.22:7,2,0	0/0:5,1:6:0.47:0,0,1	0/1:5,1:6:2.58:3,0,33	0/0:1,1:2:0:0,0,0	./.	0/0:3,0:3:2.24:0,2,4	0/0:0,1:1:0.47:0,0,1	1/1:5,2:7:3.10:8,3,0	./.	./.	1/1:3,1:2:1.60:31,2,0	1/1:0,2:2:5.90:38,6,0	1/1:3,6:9:2.70:29,3,0	1/1:3,6:9:2.84:14,3,0	./.	./.	./.	1/1:4,0:4:0.47:1,0,0	1/1:0,4:4:11.45:78,11,0	1/1:4,5:9:13.62:114,14,0	./.
chr10	41714599	.	CG	C	459.42	PASS	AB=1.000;AC=22;AF=0.579;AN=38;BaseQRankSum=-1.470;DP=214;FS=2.323;HRun=1;HaplotypeScore=40.3013;InbreedingCoeff=0.5165;MQ=79.72;MQ0=9;MQRankSum=-0.175;QD=6.13;ReadPosRankSum=-1.645;VQSLOD=0.0892;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/0:0,2:2:0:0,0,0	0/0:55,2:18:42.17:0,42,413	0/0:40,4:13:15.88:0,16,195	./.	1/1:3,5:8:7.86:104,8,0	1/1:1,5:6:0.38:1,0,0	1/1:3,1:4:11.96:118,12,0	0/0:6,0:6:0.47:0,0,1	0/1:6,0:6:0.77:1,0,24	0/0:2,0:2:0:0,0,0	./.	0/0:3,0:3:2.24:0,2,4	0/0:2,0:2:2.84:0,3,9	1/1:6,1:7:3.10:8,3,0	./.	./.	0/1:4,0:2:0.12:1,0,0	1/1:2,1:3:8.89:59,9,0	1/1:4,6:10:5.70:53,6,0	1/1:4,6:10:5.98:54,6,0	./.	./.	./.	1/1:4,0:4:0.47:1,0,0	1/1:0,4:4:7.29:55,7,0	1/1:5,4:9:13.51:120,14,0	./.
chr10	41714616	.	C	CGT	247.48	PASS	AB=0.932;AC=9;AF=0.161;AN=56;BaseQRankSum=0.780;DP=557;FS=6.647;HRun=0;HaplotypeScore=126.0390;InbreedingCoeff=0.2135;MQ=54.88;MQ0=10;MQRankSum=-1.997;QD=1.67;ReadPosRankSum=2.957;VQSLOD=2.0115;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:21:0.06:1,0,0	0/0:6,0:6:3:0,3,45	0/0:71,0:25:57.94:0,58,861	0/0:52,0:16:31.33:0,31,397	0/0:14,0:13:5.45:0,5,90	0/0:14,0:14:14.59:0,15,127	0/0:18,3:21:15.46:0,15,198	0/1:19,4:23:99:175,0,569	0/0:22,0:22:8.95:0,9,110	0/0:19,0:19:57:0,57,660	1/1:14,0:14:0.30:1,0,0	0/1:8,0:8:0:0,0,0	0/0:21,0:21:3.61:0,4,47	0/0:13,1:14:9.03:0,9,140	0/1:21,0:21:0.20:0,0,1	0/0:18,0:17:4.22:0,4,36	0/0:9,0:9:11.95:0,12,149	0/0:11,0:9:15.58:0,16,215	0/1:14,2:16:26.30:26,0,379	0/0:21,0:21:18.03:0,18,214	0/0:23,0:23:26.26:0,26,312	0/1:14,0:14:0.10:0,0,0	0/0:10,0:10:8.67:0,9,137	0/0:15,0:15:8.84:0,9,111	0/0:14,0:14:0.47:0,0,1	0/1:22,4:26:99:142,0,727	0/0:27,1:28:38.39:0,38,441	0/0:6,0:6:11.78:0,12,175
chr10	41714627	.	G	GA	542.51	PASS	AB=0.615;AC=12;AF=0.214;AN=56;BaseQRankSum=5.119;DP=461;FS=22.065;HRun=0;HaplotypeScore=114.2828;InbreedingCoeff=0.1103;MQ=74.77;MQ0=6;MQRankSum=-3.412;QD=4.02;ReadPosRankSum=0.951;VQSLOD=1.5927;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:11,12:20:28.50:29,0,45	0/0:6,0:6:3.43:0,3,43	0/0:55,0:30:60.49:0,60,918	0/0:41,0:22:36.06:0,36,456	0/0:9,0:9:6.02:0,6,84	0/0:16,0:16:30.03:0,30,357	0/0:18,0:18:27.93:0,28,357	0/0:20,0:19:57.18:0,57,777	0/1:1,9:11:47.21:47,0,98	1/1:3,8:11:33:323,33,0	0/1:2,9:11:11.93:27,0,12	0/0:10,0:10:14.57:0,15,187	0/1:7,10:18:50.84:79,0,51	0/0:14,0:14:18.05:0,18,235	0/0:2,14:18:3.30:0,3,90	0/1:3,13:15:61.24:61,0,67	0/0:11,0:11:27.05:0,27,357	1/1:5,2:5:11.67:92,12,0	0/0:11,0:11:20.27:0,20,288	0/0:16,0:16:30.10:0,30,420	0/0:23,0:23:39.04:0,39,500	0/1:2,6:8:23.71:24,0,24	0/0:8,0:8:8.98:0,9,126	0/0:17,0:17:33.41:0,33,369	0/1:1,8:9:7.69:8,0,63	0/1:19,2:21:8.89:9,0,512	0/0:26,0:26:56.93:0,57,726	0/0:6,0:6:15.02:0,15,189
chr10	41714628	.	G	GGA	1916.51	PASS	AB=0.905;AC=21;AF=0.375;AN=56;BaseQRankSum=7.131;DP=473;FS=86.092;HRun=0;HaplotypeScore=139.0447;InbreedingCoeff=0.8738;MQ=75.07;MQ0=6;MQRankSum=-6.823;QD=11.62;ReadPosRankSum=-3.685;VQSLOD=-0.1323;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,12:22:26.16:184,26,0	0/0:6,0:6:11.88:0,12,106	0/0:53,0:31:57.92:0,58,943	0/0:42,0:22:41.32:0,41,531	0/0:8,0:8:5.72:0,6,92	0/0:16,0:16:38.93:0,39,432	0/0:18,0:18:36.46:0,36,454	0/0:20,0:19:57.18:0,57,839	1/1:3,10:14:38.54:309,39,0	1/1:1,8:11:33.09:430,33,0	1/1:1,9:12:8.73:80,9,0	0/0:10,0:10:20.97:0,21,241	1/1:3,10:19:31.76:271,32,0	0/0:14,0:14:29.92:0,30,336	1/1:5,14:20:33.27:202,33,0	1/1:4,13:18:33.50:273,34,0	0/0:11,0:11:27.07:0,27,389	1/1:1,2:5:12:140,12,0	0/0:12,0:12:21.05:0,21,292	0/0:16,0:16:33.07:0,33,479	0/0:23,0:23:44.79:0,45,577	1/1:1,6:8:8.91:81,9,0	0/0:8,0:8:14.85:0,15,177	0/0:17,0:17:38.74:0,39,429	1/1:3,8:11:20.12:135,20,0	0/1:17,2:19:27.73:28,0,562	0/0:27,0:27:62.75:0,63,817	0/0:6,0:6:14.98:0,15,202
chr10	41715783	.	TTGTC	T	4802.57	PASS	AC=30;AF=0.556;AN=54;BaseQRankSum=8.309;DP=764;FS=0.000;HRun=0;HaplotypeScore=216.7708;InbreedingCoeff=0.8807;MQ=64.68;MQ0=4;MQRankSum=-4.309;QD=13.16;ReadPosRankSum=3.053;VQSLOD=4.2810;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:38,0:38:29.99:276,30,0	0/0:16,0:16:27.09:0,27,630	./.	0/0:21,0:19:3.01:0,3,47	0/0:40,0:46:13.16:0,13,256	1/1:6,0:25:41.64:373,42,0	1/1:12,0:21:6.01:56,6,0	0/0:47,0:45:39.12:0,39,620	1/1:29,0:29:27.03:251,27,0	1/1:23,0:23:33.04:307,33,0	1/1:17,0:17:14.97:124,15,0	1/1:17,10:27:21.07:326,21,0	1/1:28,0:28:29.78:263,30,0	0/0:25,0:32:3.48:0,3,53	1/1:16,0:16:12.01:112,12,0	1/1:17,0:17:36.04:335,36,0	0/0:30,0:30:45.15:0,45,1027	1/1:15,0:15:6.01:56,6,0	0/0:27,0:30:18.06:0,18,291	0/0:13,0:24:32.78:0,33,494	0/0:35,0:44:15.05:0,15,268	1/1:19,0:19:24.03:224,24,0	1/1:11,15:26:33.07:486,33,0	1/1:11,34:45:90.31:1398,90,0	1/1:19,0:19:24.02:216,24,0	0/0:23,0:37:69.17:0,69,1084	0/0:19,0:33:38.97:0,39,526	0/0:12,0:12:3.01:0,3,60
chr10	41715807	.	CTGTCTGTCTGTCTGT	C	7087.19	PASS	AB=0.837;AC=10;AF=0.179;AN=56;BaseQRankSum=12.240;DP=761;FS=5.487;HRun=0;HaplotypeScore=354.9225;InbreedingCoeff=-0.2116;MQ=50.71;MQ0=11;MQRankSum=-9.613;QD=31.50;ReadPosRankSum=6.525;VQSLOD=2.4576;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:21,10:30:15.26:1148,0,15	0/0:15,0:15:45.15:0,45,2552	0/0:25,0:16:48.16:0,48,1266	0/0:22,0:17:51.05:0,51,1156	0/0:43,0:42:69.77:0,70,2945	0/0:26,0:26:63.21:0,63,1205	0/0:23,0:23:29.91:0,30,836	0/0:49,0:47:99:0,138,6049	0/1:24,0:24:99:435,0,426	0/1:15,11:27:99:1239,0,176	0/1:16,5:21:99:577,0,102	0/0:20,0:20:48.12:0,48,1427	0/1:24,0:24:99:507,0,213	0/0:34,0:34:41.87:0,42,1525	0/1:18,4:22:99:461,0,120	0/1:12,11:23:64.68:1286,0,65	0/0:32,0:32:81.23:0,81,4691	0/1:15,2:17:99:194,0,239	0/0:30,0:23:69.22:0,69,2493	0/0:27,0:26:56.93:0,57,3108	0/0:41,0:41:63.06:0,63,2608	0/1:20,0:20:99:388,0,185	0/0:27,0:27:60.02:0,60,2346	0/0:46,0:46:99:0,126,4791	0/1:9,7:16:56.74:853,0,57	0/0:36,0:36:99:0,108,5837	0/0:33,0:32:75.73:0,76,3763	0/0:7,0:7:18.06:0,18,809
chr10	41715811	.	CTGTCTGTCTGT	C	6323.93	PASS	AB=0.903;AC=10;AF=0.179;AN=56;BaseQRankSum=14.207;DP=758;FS=8.273;HRun=0;HaplotypeScore=304.6152;InbreedingCoeff=-0.2200;MQ=51.28;MQ0=11;MQRankSum=-11.748;QD=28.49;ReadPosRankSum=8.910;VQSLOD=1.9601;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:32,0:31:78.63:811,0,79	0/0:15,0:15:45.15:0,45,1956	0/0:25,0:19:57.19:0,57,1071	0/0:23,0:17:50.65:0,51,906	0/0:43,0:42:69.77:0,70,2228	0/0:25,0:25:10.40:0,10,304	0/0:23,0:23:22.22:0,22,448	0/0:48,0:46:99:0,135,4335	0/1:12,9:21:65.63:716,0,66	0/1:27,1:28:99:863,0,245	0/1:22,0:22:99:384,0,157	0/0:18,0:18:42.14:0,42,897	0/1:12,9:21:39.45:901,0,39	0/0:35,0:35:45.52:0,46,1142	0/1:22,0:22:99:329,0,135	0/1:24,1:25:99:955,0,143	0/0:34,0:34:90.19:0,90,3648	0/1:17,0:17:99:119,0,272	0/0:30,0:23:69.23:0,69,1873	0/0:29,0:28:62.91:0,63,2419	0/0:39,0:39:56.91:0,57,1836	0/1:11,8:19:38.99:634,0,39	0/0:27,0:27:56.92:0,57,1511	0/0:47,0:47:99:0,129,3058	0/1:15,0:15:31.19:612,0,31	0/0:35,0:35:99:0,105,4338	0/0:33,0:32:75:0,75,2810	0/0:7,0:7:18.02:0,18,563
chr10	41716432	.	T	TAAA	6262.35	PASS	AB=0.858;AC=26;AF=0.464;AN=56;BaseQRankSum=11.823;DP=737;FS=3.790;HRun=10;HaplotypeScore=190.6543;InbreedingCoeff=0.7437;MQ=68.30;MQ0=1;MQRankSum=-6.848;QD=15.09;ReadPosRankSum=-2.162;VQSLOD=0.7932;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:14,19:35:56.46:817,56,0	0/0:12,0:12:32.93:0,33,379	0/1:25,0:24:19.93:20,0,412	0/1:19,0:18:3.86:4,0,310	0/1:3,0:26:7.48:57,0,7	0/0:27,0:27:69.17:0,69,839	0/0:29,0:29:81.22:0,81,968	0/0:43,0:43:99:0,99,1203	1/1:7,0:21:37.29:383,37,0	1/1:11,1:40:92.83:976,93,0	1/1:9,0:19:45:449,45,0	0/0:27,0:27:62.34:0,62,325	1/1:4,0:27:57:527,57,0	1/1:5,0:30:31.45:80,31,0	1/1:10,0:41:84.38:784,84,0	1/1:7,17:25:51.13:884,51,0	0/0:32,0:32:50.28:0,50,344	1/1:5,0:12:21.51:214,22,0	0/0:28,0:28:61.16:0,61,801	0/0:20,0:20:45.01:0,45,526	0/0:24,0:26:61.29:0,61,712	1/1:12,0:25:49.98:468,50,0	0/0:19,0:19:40.19:0,40,208	0/0:30,0:30:74.71:0,75,386	1/1:10,0:29:56.97:566,57,0	0/1:32,0:36:32.84:33,0,858	0/0:21,0:21:57.13:0,57,679	0/0:7,0:8:19.42:0,19,253
chr10	41716442	.	AC	A	5580.42	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=16.928;DP=709;FS=4.314;HRun=2;HaplotypeScore=139.4713;InbreedingCoeff=0.9990;MQ=74.46;MQ0=1;MQRankSum=-7.069;QD=15.63;ReadPosRankSum=2.423;VQSLOD=5.1024;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:30,1:31:45.30:254,45,0	0/0:12,0:12:31.77:0,32,410	0/0:29,0:29:46.03:0,46,725	0/0:20,0:21:26.77:0,27,452	0/0:26,0:26:68.62:0,69,543	0/0:24,0:24:72.22:0,72,959	0/0:32,0:32:96.07:0,96,1174	0/0:36,0:36:99:0,108,1395	1/1:19,0:23:36.87:198,37,0	1/1:28,0:32:49.39:316,49,0	1/1:12,0:16:28.74:155,29,0	1/1:0,28:28:69.12:849,69,0	1/1:27,0:28:55.91:261,56,0	0/0:29,0:29:69.15:0,69,568	1/1:39,0:41:77.60:378,78,0	1/1:22,0:23:34.36:151,34,0	1/1:2,29:31:81.24:1027,81,0	1/1:9,0:9:22.91:101,23,0	0/0:28,0:28:78.19:0,78,973	0/0:21,0:21:62.99:0,63,774	0/0:27,0:27:71.99:0,72,895	1/1:16,0:19:37.02:185,37,0	1/1:0,17:17:42.08:539,42,0	1/1:0,28:28:78.25:1005,78,0	1/1:24,0:26:32.70:161,33,0	0/0:33,0:33:54.64:0,55,1126	0/0:24,0:24:69.13:0,69,851	0/0:8,0:8:24.06:0,24,309
chr10	41716758	.	CT	C	3463.26	PASS	AB=0.590;AC=22;AF=0.393;AN=56;BaseQRankSum=7.232;DP=530;FS=5.518;HRun=10;HaplotypeScore=69.7080;InbreedingCoeff=0.8571;MQ=64.89;MQ0=6;MQRankSum=0.819;QD=15.60;ReadPosRankSum=3.577;VQSLOD=4.2458;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:38:99:0,99,1085	0/0:7,0:8:11.90:0,12,114	0/0:6,0:6:8.92:0,9,82	0/0:7,0:5:6.01:0,6,63	0/0:19,0:19:39.11:0,39,431	0/0:19,0:20:47.87:0,48,472	0/0:26,0:26:63.13:0,63,683	0/0:31,0:31:74.99:0,75,790	0/1:3,12:15:0.17:227,0,0	0/1:6,9:15:7.63:201,0,8	1/1:3,7:10:11.44:102,11,0	1/1:3,15:18:22.18:205,22,0	1/1:0,17:17:35.99:313,36,0	0/0:22,0:22:54.11:0,54,584	1/1:4,23:27:47.98:416,48,0	0/0:17,0:17:30.50:0,30,310	1/1:7,27:34:23.82:436,24,0	1/1:6,18:22:50.63:499,51,0	0/0:23,0:24:55.67:0,56,577	0/0:16,0:16:38.54:0,39,385	0/0:25,0:24:57.63:0,58,630	1/1:3,12:15:29.97:257,30,0	1/1:2,10:12:20.73:182,21,0	1/1:1,14:15:38.99:339,39,0	1/1:1,19:20:32.98:286,33,0	0/0:16,0:16:36.10:0,36,398	0/0:23,0:23:32.92:0,33,316	0/0:8,0:8:9.02:0,9,100
chr10	41717778	.	CT	C	10343.69	PASS	AB=0.899;AC=52;AF=0.929;AN=56;BaseQRankSum=2.621;DP=444;FS=0.000;HRun=8;HaplotypeScore=78.1645;InbreedingCoeff=0.4594;MQ=75.08;MQ0=0;MQRankSum=-4.353;QD=23.78;ReadPosRankSum=3.107;VQSLOD=5.5019;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,11:12:30.05:290,30,0	0/0:9,0:9:27.08:0,27,326	0/1:7,1:8:8.89:9,0,177	0/1:9,1:10:31.74:32,0,126	1/1:2,19:21:45.07:434,45,0	1/1:3,20:23:60.09:579,60,0	1/1:1,8:9:24.04:232,24,0	1/1:5,42:47:99:1145,120,0	1/1:0,17:17:42.07:405,42,0	1/1:1,23:24:69.09:660,69,0	1/1:1,15:16:42.06:405,42,0	1/1:2,12:14:33.05:319,33,0	1/1:3,22:25:66.10:637,66,0	1/1:1,16:17:48.06:458,48,0	1/1:2,14:16:42.06:406,42,0	1/1:1,20:21:51.08:493,51,0	1/1:4,14:18:39.03:369,39,0	1/1:1,19:20:48.08:463,48,0	1/1:1,18:19:54.08:518,54,0	1/1:1,10:11:30.05:289,30,0	1/1:1,5:6:15.02:145,15,0	1/1:1,13:14:36.05:347,36,0	1/1:0,4:4:9.01:87,9,0	1/1:0,6:6:12.02:116,12,0	1/1:1,16:17:45.07:434,45,0	1/1:2,16:18:48.07:463,48,0	1/1:0,19:18:54.09:521,54,0	1/1:0,3:3:9.01:87,9,0
chr10	41717830	.	A	AAT	3138.96	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-4.024;DP=406;FS=4.650;HRun=0;HaplotypeScore=81.5069;InbreedingCoeff=0.9370;MQ=65.41;MQ0=0;MQRankSum=-0.455;QD=41.85;ReadPosRankSum=-0.444;VQSLOD=4.8661;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:42.14:0,42,559	0/0:13,0:13:30.10:0,30,399	0/0:5,0:5:9.03:0,9,117	0/0:3,0:3:2.50:0,2,9	1/1:3,25:28:69.24:1179,69,0	0/0:12,0:12:36.12:0,36,474	0/0:7,0:7:21.05:0,21,263	0/0:29,0:29:81.26:0,81,1064	0/0:12,0:12:33.09:0,33,423	0/0:21,0:21:54.16:0,54,694	0/0:22,0:22:57.19:0,57,758	1/1:0,12:12:33.11:570,33,0	0/0:12,0:12:33.11:0,33,440	1/1:3,7:10:24.06:387,24,0	0/0:10,0:10:27.06:0,27,328	0/0:18,0:18:51.17:0,51,679	1/1:0,15:15:42.14:726,42,0	0/0:23,0:23:57.15:0,57,724	0/0:13,0:13:33.11:0,33,438	0/0:30,0:30:87.26:0,87,1126	0/0:7,0:7:21.07:0,21,280	0/0:7,0:7:18.06:0,18,239	1/1:0,7:7:21.07:363,21,0	1/1:2,1:3:8.97:96,9,0	0/0:23,0:23:63.20:0,63,824	0/0:16,0:16:45.12:0,45,567	0/0:24,0:22:60.20:0,60,798	0/0:8,0:8:21:0,21,228
chr10	41717987	.	TTATG	T	388.30	PASS	AB=1.000;AC=7;AF=0.135;AN=52;BaseQRankSum=-3.891;DP=584;FS=0.867;HRun=0;HaplotypeScore=145.5967;InbreedingCoeff=0.1422;MQ=56.49;MQ0=3;MQRankSum=2.241;QD=3.96;ReadPosRankSum=1.973;VQSLOD=2.3856;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:17:14.90:0,15,188	0/1:13,0:13:52.92:126,0,53	./.	./.	0/0:28,0:28:22.06:0,22,175	0/0:23,0:23:14.94:0,15,147	0/0:12,0:12:11.89:0,12,88	0/0:42,0:40:56.34:0,56,387	0/0:16,0:16:27.03:0,27,418	0/0:23,0:22:39.08:0,39,575	0/0:28,0:28:41.83:0,42,462	0/1:18,0:18:99:142,0,114	1/1:6,13:19:2.93:47,3,0	0/1:16,0:16:24.59:25,0,103	0/0:12,0:12:11.73:0,12,87	0/0:28,0:24:26.86:0,27,257	0/0:11,0:11:6:0,6,73	0/0:16,0:17:2.98:0,3,186	0/0:25,0:25:29.31:0,29,242	0/0:38,0:34:23.83:0,24,206	0/0:8,0:8:5.92:0,6,42	0/0:11,0:11:21.01:0,21,291	0/1:19,0:18:0.88:124,0,1	0/1:13,0:13:47.92:48,0,65	0/0:34,0:33:45.01:0,45,534	0/0:26,0:25:41.96:0,42,551	0/0:46,0:41:39.01:0,39,427	0/0:19,0:19:17.93:0,18,200
chr10	41718027	.	GTATCTATC	G	49.58	PASS	AB=1.000;AC=5;AF=0.096;AN=52;BaseQRankSum=0.610;DP=630;FS=0.000;HRun=0;HaplotypeScore=240.8651;InbreedingCoeff=0.6277;MQ=50.23;MQ0=7;MQRankSum=2.985;QD=0.72;ReadPosRankSum=2.254;VQSLOD=2.5729;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:36.02:0,36,714	0/0:9,0:9:14.08:0,14,353	./.	./.	1/1:8,20:28:8.75:131,9,0	0/0:24,0:24:5.78:0,6,77	0/1:21,0:17:0.03:0,0,0	0/0:62,0:60:65.79:0,66,766	0/0:26,0:26:72.23:0,72,1672	0/0:27,0:26:60.15:0,60,1544	0/0:32,0:31:45.15:0,45,857	0/0:20,0:20:33.10:0,33,725	0/0:19,0:19:21.07:0,21,419	1/1:6,0:20:1.36:2,1,0	0/0:6,0:19:9:0,9,195	0/0:26,0:22:36.04:0,36,498	0/0:15,0:15:1.45:0,1,65	0/0:20,0:21:33.95:0,34,498	0/0:21,0:21:30.04:0,30,624	0/0:36,0:31:21.07:0,21,604	0/0:13,0:13:18.04:0,18,335	0/0:16,0:16:33.11:0,33,827	0/0:25,0:24:12.04:0,12,287	0/0:14,0:14:21.05:0,21,457	0/0:32,0:31:60.18:0,60,1264	0/0:23,0:22:51.06:0,51,994	0/0:47,0:43:69.17:0,69,1220	0/0:10,0:10:18.06:0,18,364
chr10	41718132	.	TG	T	21356.07	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=3.094;DP=666;FS=4.000;HRun=2;HaplotypeScore=78.2740;InbreedingCoeff=0.9995;MQ=71.76;MQ0=0;MQRankSum=-9.223;QD=35.42;ReadPosRankSum=5.563;VQSLOD=5.1564;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,22:22:57.19:739,57,0	0/0:14,0:14:36.12:0,36,540	0/0:20,0:20:60.19:0,60,879	0/0:29,0:29:68.76:0,69,944	1/1:0,30:30:87.28:1129,87,0	1/1:0,21:21:60.15:760,60,0	1/1:0,12:12:33.11:428,33,0	1/1:1,29:30:87.25:1090,87,0	1/1:0,23:23:66.21:857,66,0	1/1:0,28:28:84.27:1090,84,0	1/1:0,30:30:78.25:1013,78,0	1/1:0,27:27:66.21:856,66,0	1/1:0,31:31:78.25:1012,78,0	1/1:0,37:37:99:1285,99,0	1/1:0,25:25:66.21:857,66,0	1/1:0,29:29:81.26:1051,81,0	1/1:0,23:23:66.21:856,66,0	1/1:0,21:21:63.20:816,63,0	1/1:0,15:15:45.08:548,45,0	1/1:0,33:33:96.31:1246,96,0	1/1:1,16:17:45.10:565,45,0	1/1:1,22:23:63.20:818,63,0	1/1:0,14:14:42.14:543,42,0	1/1:0,15:15:42.14:545,42,0	1/1:0,33:33:84.27:1091,84,0	1/1:0,16:15:42.13:531,42,0	1/1:1,37:38:99:1281,99,0	1/1:0,10:10:27.09:350,27,0
chr10	41718249	.	A	ACTTC	18692.54	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-5.374;DP=713;FS=0.603;HRun=0;HaplotypeScore=138.6825;InbreedingCoeff=0.9987;MQ=80.70;MQ0=0;MQRankSum=-11.430;QD=61.69;ReadPosRankSum=-1.087;VQSLOD=6.2629;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,16:21:47.99:1091,48,0	0/0:16,0:16:45.15:0,45,844	0/0:17,0:17:42.13:0,42,733	0/0:24,0:24:60.09:0,60,1028	1/1:2,24:27:59.95:1356,60,0	0/0:23,0:23:66.19:0,66,1187	0/0:19,0:19:57.19:0,57,1052	1/1:13,17:33:90.25:2179,90,0	0/0:32,0:32:96.32:0,96,1785	0/0:41,0:40:99:0,117,2189	0/0:27,0:27:81.25:0,81,1467	0/0:24,0:24:72.25:0,72,1360	0/0:25,0:25:75.26:0,75,1408	1/1:4,33:40:99:2520,99,0	0/0:32,0:32:93.30:0,93,1725	1/1:5,22:27:69.24:1768,69,0	0/0:25,0:25:72.20:0,72,1299	0/0:9,0:9:21.07:0,21,392	1/1:5,14:19:54.18:1371,54,0	1/1:3,31:34:99:2457,99,0	1/1:2,7:12:21.07:526,21,0	0/0:26,0:26:66.21:0,66,1221	0/0:23,0:23:66.21:0,66,1221	0/0:18,0:18:51.13:0,51,920	0/0:29,0:29:84.29:0,84,1595	1/1:5,28:33:96.31:2419,96,0	1/1:7,33:40:87.21:2280,87,0	1/1:0,14:17:27.09:727,27,0
chr10	41719125	.	ATGGTCTGGCACT	A	8854.34	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=14.084;DP=708;FS=9.909;HRun=0;HaplotypeScore=243.3105;InbreedingCoeff=0.9988;MQ=83.83;MQ0=0;MQRankSum=-13.740;QD=75.04;ReadPosRankSum=2.979;VQSLOD=3.2349;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,99,5299	0/0:9,0:9:27.09:0,27,1468	0/0:30,0:30:81.24:0,81,3808	0/0:20,0:20:54.19:0,54,2623	0/0:35,0:35:93.32:0,93,5185	0/0:31,0:31:87.30:0,87,5216	0/0:24,0:24:69.24:0,69,3770	0/0:24,0:24:60.21:0,60,3421	0/0:31,0:31:87.28:0,87,4953	1/1:5,24:29:66.20:2214,66,0	1/1:1,19:20:45.15:1603,45,0	0/0:22,0:22:66.23:0,66,3812	0/0:25,0:25:69.24:0,69,4054	0/0:30,0:30:90.28:0,90,5050	1/1:6,32:38:75.26:2694,75,0	0/0:21,0:21:60.21:0,60,3341	0/0:27,0:27:75.26:0,75,4172	1/1:3,9:12:21.07:718,21,0	0/0:25,0:25:57.20:0,57,3215	0/0:20,0:20:54.17:0,54,2993	0/0:44,0:44:99:0,117,6564	0/0:23,0:23:66.23:0,66,3615	0/0:16,0:16:42.14:0,42,2381	0/0:26,0:26:75.26:0,75,4195	1/1:3,16:19:48.16:1626,48,0	0/0:28,0:28:81.28:0,81,4620	0/0:29,0:29:81.26:0,81,4300	0/0:14,0:14:42.14:0,42,2537
chr10	41719241	.	A	AT	2365.69	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-7.146;DP=663;FS=2.768;HRun=7;HaplotypeScore=75.1852;InbreedingCoeff=0.9857;MQ=72.33;MQ0=0;MQRankSum=0.511;QD=27.51;ReadPosRankSum=3.139;VQSLOD=4.5070;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:87.12:0,87,833	0/0:16,0:16:42.06:0,42,406	0/0:12,0:12:20.95:0,21,184	0/0:11,0:11:11.63:0,12,81	0/0:19,0:19:36.03:0,36,342	0/0:26,0:26:72.11:0,72,695	0/0:15,0:15:42.07:0,42,406	0/0:29,0:29:75.10:0,75,720	1/1:0,24:24:66.20:797,66,0	0/0:30,0:30:81.12:0,81,782	0/0:25,0:25:72.10:0,72,689	0/0:30,0:30:90.15:0,90,869	1/1:5,31:36:83.96:1001,84,0	0/0:34,0:34:78.11:0,78,747	0/0:36,0:36:96.13:0,96,921	0/0:28,1:29:50.89:0,51,769	0/0:14,0:14:42.07:0,42,406	0/0:18,0:18:33.04:0,33,318	0/0:22,0:22:54.07:0,54,516	0/0:32,0:32:84.12:0,84,810	0/0:16,0:16:45.07:0,45,435	1/1:4,22:26:60.16:710,60,0	0/0:27,0:27:81.13:0,81,782	0/0:30,0:30:81.09:0,81,769	0/0:14,0:14:39.06:0,39,377	0/0:30,0:30:90.15:0,90,869	0/0:23,0:23:63.03:0,63,584	0/0:8,0:8:24.04:0,24,232
chr10	41719306	.	T	TTTGC	4631.66	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.486;DP=771;FS=7.521;HRun=0;HaplotypeScore=148.2584;InbreedingCoeff=0.9994;MQ=77.13;MQ0=0;MQRankSum=-9.070;QD=63.45;ReadPosRankSum=-1.554;VQSLOD=5.9173;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,105,2011	0/0:13,0:13:39.13:0,39,745	0/0:23,0:23:52.53:0,53,1076	0/0:20,0:20:26.95:0,27,816	1/1:1,31:35:78.27:2056,78,0	0/0:27,0:26:78.27:0,78,1557	0/0:22,0:22:63.20:0,63,1203	0/0:24,0:24:69.21:0,69,1267	0/0:31,0:31:84.27:0,84,1642	0/0:38,0:38:99:0,114,2190	0/0:29,0:29:84.29:0,84,1677	0/0:28,0:28:84.26:0,84,1594	0/0:35,0:35:99:0,102,2020	1/1:1,32:38:93.32:2576,93,0	0/0:37,0:37:93.29:0,93,1784	0/0:25,0:25:72.25:0,72,1438	0/0:17,0:17:51.16:0,51,981	0/0:13,0:13:39.08:0,39,704	0/0:18,0:18:54.18:0,54,1043	0/0:25,0:25:75.23:0,75,1429	0/0:20,0:20:60.20:0,60,1163	0/0:30,0:30:90.31:0,90,1783	0/0:41,0:41:99:0,114,2155	0/0:28,0:28:84.23:0,84,1554	0/0:31,0:31:87.29:0,87,1704	0/0:36,0:36:99:0,105,2002	0/0:30,0:30:90.29:0,90,1760	0/0:21,0:21:63.22:0,63,1258
chr10	41720056	.	TA	T	178.35	PASS	AB=1.000;AC=12;AF=0.222;AN=54;BaseQRankSum=4.424;DP=152;FS=1.357;HRun=1;HaplotypeScore=23.5906;InbreedingCoeff=0.5249;MQ=81.03;MQ0=3;MQRankSum=-2.363;QD=5.75;ReadPosRankSum=-1.612;VQSLOD=-0.1463;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:30.08:0,30,343	0/0:5,0:5:14.07:0,14,147	0/0:9,0:4:2.45:0,2,34	0/0:27,0:11:19.53:0,20,131	1/1:0,4:4:6:62,6,0	0/0:1,0:1:3.01:0,3,35	0/0:2,0:2:6.02:0,6,71	0/0:16,0:16:48.10:0,48,536	0/0:1,0:1:3.01:0,3,35	0/1:7,0:7:5.89:77,0,6	1/1:4,0:4:8.91:60,9,0	0/0:9,0:9:18.05:0,18,212	0/0:3,0:3:9.03:0,9,106	1/1:0,1:1:3.01:39,3,0	1/1:3,0:3:5.10:25,5,0	0/0:3,0:3:9.01:0,9,95	0/0:5,0:5:9.03:0,9,106	0/1:9,0:9:0.72:12,0,1	0/0:5,0:5:15.04:0,15,177	0/0:6,0:6:18.05:0,18,212	./.	0/0:2,0:2:6.02:0,6,71	0/0:4,0:4:12.02:0,12,131	0/0:2,0:2:6.02:0,6,80	1/1:3,0:3:8.72:50,9,0	0/0:1,0:1:3.01:0,3,35	0/0:8,0:8:24.06:0,24,272	0/0:2,0:2:6.01:0,6,74
chr10	41720057	.	A	ATTTTTT	706.37	PASS	AB=1.000;AC=13;AF=0.241;AN=54;BaseQRankSum=1.976;DP=159;FS=0.000;HRun=3;HaplotypeScore=34.8835;InbreedingCoeff=0.5834;MQ=80.15;MQ0=3;MQRankSum=-3.189;QD=20.18;ReadPosRankSum=-1.464;VQSLOD=-0.6323;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:30.07:0,30,514	0/0:5,0:5:15.05:0,15,280	0/0:9,0:4:5.62:0,6,64	0/0:26,0:11:14.68:0,15,128	0/1:5,0:5:12.59:18,0,13	0/0:2,0:2:3.01:0,3,50	0/0:2,0:2:6.02:0,6,129	0/0:16,0:16:48.15:0,48,906	0/0:1,0:1:3.01:0,3,65	1/1:7,0:7:21.05:332,21,0	1/1:4,0:4:9.03:180,9,0	0/0:9,0:9:18.06:0,18,372	0/0:4,0:4:9.03:0,9,194	1/1:1,0:1:2.88:15,3,0	1/1:3,0:3:9.02:142,9,0	0/0:3,0:3:9.02:0,9,155	0/0:5,0:5:9.03:0,9,176	1/1:2,8:11:5.98:85,6,0	0/0:5,0:5:15.05:0,15,290	0/0:6,0:6:18.05:0,18,333	./.	0/0:2,0:2:6.02:0,6,129	0/0:5,0:5:12.02:0,12,219	0/0:2,0:2:6.01:0,6,89	1/1:4,0:4:8.86:94,9,0	0/0:1,0:1:3.01:0,3,65	0/0:8,0:8:24.07:0,24,460	0/0:2,0:2:2.84:0,3,14
chr10	41720454	.	AGT	A	5476.58	PASS	AB=0.978;AC=15;AF=0.268;AN=56;BaseQRankSum=-4.133;DP=924;FS=3.255;HRun=0;HaplotypeScore=200.1540;InbreedingCoeff=0.9158;MQ=62.03;MQ0=6;MQRankSum=3.695;QD=21.06;ReadPosRankSum=-2.400;VQSLOD=4.3406;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:24:24.75:0,25,157	0/0:17,0:17:48.15:0,48,759	0/1:43,1:29:7.15:7,0,668	0/0:40,0:33:38.78:0,39,638	0/0:9,0:20:43.71:0,44,392	0/0:30,0:30:54.28:0,54,1167	0/0:31,0:31:75.21:0,75,1188	1/1:12,28:40:84.16:980,84,0	0/0:4,0:47:70.62:0,71,689	0/0:9,0:37:83.15:0,83,737	0/0:11,0:32:51.17:0,51,411	0/0:44,0:44:99:0,108,1749	0/0:9,0:37:25.13:0,25,375	0/0:7,0:43:99:0,102,898	0/0:11,0:54:89.52:0,90,775	0/0:11,0:47:41.61:0,42,477	0/0:10,0:37:67.75:0,68,586	0/0:3,0:20:39.01:0,39,345	1/1:9,15:23:11.83:472,12,0	1/1:3,23:26:63.20:776,63,0	1/1:9,48:57:99:1326,111,0	0/0:4,0:18:32.21:0,32,236	0/0:19,0:19:51.16:0,51,804	0/0:44,1:45:80.17:0,80,1727	0/0:3,0:21:48.02:0,48,423	1/1:2,25:28:51.80:902,52,0	1/1:6,22:28:63.19:781,63,0	1/1:2,10:12:20.65:233,21,0
chr10	41720788	.	T	TA	2181.97	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-8.088;DP=754;FS=2.414;HRun=1;HaplotypeScore=76.0062;InbreedingCoeff=0.9984;MQ=86.36;MQ0=0;MQRankSum=-1.420;QD=36.98;ReadPosRankSum=1.886;VQSLOD=4.3171;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,102,1348	0/0:13,0:13:39.12:0,39,527	0/0:29,0:29:82.65:0,83,1007	0/0:21,0:21:23.41:0,23,586	1/1:0,28:28:81.27:1168,81,0	0/0:30,0:30:90.25:0,90,1215	0/0:22,0:22:66.20:0,66,875	0/0:40,0:40:99:0,114,1461	0/0:26,0:26:78.22:0,78,1025	0/0:45,0:45:99:0,132,1752	0/0:36,0:36:99:0,108,1384	0/0:22,0:22:66.21:0,66,905	0/0:34,0:34:99:0,102,1366	1/1:0,31:31:78.26:1136,78,0	0/0:29,0:29:87.27:0,87,1183	0/0:35,0:35:99:0,102,1355	0/0:22,0:22:66.17:0,66,856	0/0:13,0:13:39.11:0,39,525	0/0:20,0:20:60.17:0,60,802	0/0:30,0:30:90.29:0,90,1228	0/0:16,0:16:45.13:0,45,595	0/0:20,0:20:52.41:0,52,690	0/0:23,0:23:66.20:0,66,884	0/0:24,0:24:72.21:0,72,955	0/0:28,0:28:84.24:0,84,1097	0/0:34,0:34:99:0,102,1345	0/0:39,0:39:99:0,117,1584	0/0:10,0:10:30.02:0,30,376
chr10	41722498	.	TTTTATTTATTTATTTATTTATTTATTTA	T	2931.06	PASS	AB=1.000;AC=9;AF=0.167;AN=54;BaseQRankSum=5.804;DP=292;FS=15.624;HRun=0;HaplotypeScore=210.7350;InbreedingCoeff=0.6215;MQ=66.71;MQ0=1;MQRankSum=-4.089;QD=44.41;ReadPosRankSum=1.405;VQSLOD=1.6155;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:10:18.06:0,18,1541	0/0:6,0:6:6.02:0,6,479	0/0:6,0:5:1.25:0,1,3	0/0:6,0:5:3.01:0,3,73	0/0:8,0:9:9.02:0,9,441	0/0:6,0:10:21.06:0,21,1312	0/0:2,0:3:6.02:0,6,272	0/0:39,0:39:66.22:0,66,5203	0/0:9,0:9:3.01:0,3,385	1/1:12,4:16:12.03:499,12,0	1/1:5,3:8:6.02:433,6,0	0/0:3,0:3:6.02:0,6,227	0/0:8,0:8:21.06:0,21,1980	0/0:5,0:6:3.01:0,3,205	1/1:14,6:20:12.04:866,12,0	0/0:11,0:12:12.04:0,12,1110	0/0:2,0:10:27.09:0,27,2354	0/1:9,0:9:0:0,0,0	0/0:18,0:17:18.06:0,18,1452	0/0:6,0:6:6.02:0,6,691	0/0:7,0:7:21.07:0,21,1511	0/0:7,0:7:0.47:0,0,1	0/0:7,0:7:6.02:0,6,297	./.	1/1:7,6:13:18.06:1272,18,0	0/0:8,0:8:8.99:0,9,567	0/0:14,0:14:33.10:0,33,2873	0/0:22,0:22:48.16:0,48,4511
chr10	41722951	.	A	AT	1186.88	PASS	AB=0.958;AC=6;AF=0.107;AN=56;BaseQRankSum=-1.171;DP=518;FS=2.906;HRun=8;HaplotypeScore=56.7856;InbreedingCoeff=0.6240;MQ=78.99;MQ0=0;MQRankSum=1.036;QD=17.20;ReadPosRankSum=-0.646;VQSLOD=3.4396;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:42.02:0,42,384	0/0:6,0:6:12:0,12,110	0/1:10,1:10:11.39:11,0,82	0/1:16,0:16:29.58:30,0,153	1/1:3,25:28:75.22:866,75,0	0/0:23,0:23:57.01:0,57,521	0/0:13,0:13:39.02:0,39,357	0/0:34,0:34:87.01:0,87,785	0/0:11,0:11:33.02:0,33,302	0/0:25,0:25:69.04:0,69,632	0/0:20,0:20:51.01:0,51,461	0/0:19,0:19:48.02:0,48,439	0/0:13,0:13:33.01:0,33,302	1/1:1,13:14:36.11:415,36,0	0/0:25,0:25:75.01:0,75,677	0/0:28,0:28:78.02:0,78,705	0/0:18,0:18:48.02:0,48,438	0/0:11,0:11:23.99:0,24,214	0/0:22,0:22:51.02:0,51,467	0/0:14,0:14:39.02:0,39,357	0/0:12,0:12:33.02:0,33,302	0/0:20,0:20:53.92:0,54,477	0/0:25,0:25:69.01:0,69,626	0/0:7,0:7:18:0,18,160	0/0:23,0:23:57.01:0,57,516	0/0:31,0:31:78.03:0,78,710	0/0:24,0:25:65.04:0,65,577	0/0:8,0:8:21.01:0,21,192
chr10	41724442	.	AAGCAAAG	A	1871.64	PASS	AC=6;AF=0.111;AN=54;BaseQRankSum=4.203;DP=459;FS=0.000;HRun=0;HaplotypeScore=69.1734;InbreedingCoeff=0.6102;MQ=29.78;MQ0=182;MQRankSum=-4.026;QD=64.54;ReadPosRankSum=1.939;VQSLOD=3.5262;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:9:3.01:0,3,113	0/0:5,0:4:12.04:0,12,490	./.	0/0:12,0:2:0:0,0,0	0/0:19,0:15:24.08:0,24,821	0/0:13,0:8:18.06:0,18,699	0/0:16,0:9:24.08:0,24,881	0/0:20,0:6:18.06:0,18,709	0/0:20,0:13:3.01:0,3,123	0/0:18,0:14:39.13:0,39,1509	0/0:20,0:12:6.02:0,6,243	1/1:1,12:12:33.11:888,33,0	0/0:26,0:18:20.63:0,21,764	0/0:16,0:9:15.05:0,15,609	0/0:27,0:21:9.03:0,9,367	0/0:16,0:10:14.14:0,14,611	0/0:7,0:2:3.01:0,3,122	0/0:15,0:2:3.01:0,3,123	0/0:19,0:11:33.09:0,33,1216	0/0:19,0:12:36.12:0,36,1385	0/0:31,0:4:6.02:0,6,235	0/0:10,0:6:3.01:0,3,88	1/1:0,10:10:30.10:794,30,0	1/1:0,6:5:12.04:323,12,0	0/0:24,0:18:36.12:0,36,1260	0/0:23,0:17:51.18:0,51,1873	0/0:18,0:14:26.62:0,27,1102	0/0:3,0:1:3.01:0,3,62
chr10	41724500	.	G	GCTGGATCAATTCAACCCC	4697.33	PASS	AC=4;AF=0.080;AN=50;BaseQRankSum=-1.716;DP=606;FS=2.181;HRun=0;HaplotypeScore=190.2237;InbreedingCoeff=0.9237;MQ=30.45;MQ0=187;MQRankSum=-2.588;QD=138.16;ReadPosRankSum=0.011;VQSLOD=4.8987;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:23:21.07:0,21,961	0/0:10,0:9:18.06:0,18,815	./.	./.	1/1:4,6:14:26.66:2063,27,0	0/0:22,0:16:15.04:0,15,372	0/0:28,0:19:9.03:0,9,436	0/0:21,0:12:33.11:0,33,1467	0/0:24,0:17:15.05:0,15,708	0/0:21,0:19:54.17:0,54,2427	0/0:18,0:13:15.05:0,15,591	0/0:26,0:26:53.81:0,54,2412	0/0:27,0:19:33.11:0,33,1544	1/1:12,5:18:42.14:2634,42,0	0/0:32,0:28:39.13:0,39,1921	0/0:23,0:16:21.07:0,21,946	0/0:29,0:21:36.11:0,36,1438	0/0:23,0:15:33.07:0,33,1327	0/0:14,0:8:24.08:0,24,1077	0/0:26,0:19:48.16:0,48,1896	0/0:43,0:21:23.92:0,24,948	0/0:17,0:10:15.05:0,15,773	0/0:20,0:15:33.11:0,33,1481	0/0:22,0:12:27.08:0,27,1009	0/0:24,0:17:18.06:0,18,810	0/0:13,0:9:27.09:0,27,1210	0/0:24,0:18:23.63:0,24,1083	./.
chr10	41725318	.	GA	G	1309.78	PASS	AB=0.708;AC=14;AF=0.250;AN=56;BaseQRankSum=11.120;DP=488;FS=1.934;HRun=10;HaplotypeScore=51.5922;InbreedingCoeff=0.7852;MQ=72.87;MQ0=0;MQRankSum=1.245;QD=9.92;ReadPosRankSum=2.472;VQSLOD=2.2492;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:72.19:0,72,796	0/0:10,0:10:27.07:0,27,299	0/0:12,0:12:26.93:0,27,270	0/0:4,1:5:5.81:0,6,46	0/0:28,0:29:69.02:0,69,744	0/0:24,2:26:11.06:0,11,578	0/0:6,0:6:15.04:0,15,166	0/0:26,0:26:56.98:0,57,605	0/1:2,0:13:11.85:33,0,12	0/0:21,0:21:51.14:0,51,564	0/0:36,0:36:78.21:0,78,863	1/1:1,9:10:26.99:234,27,0	1/1:5,0:23:32.58:96,33,0	0/0:9,1:10:1.02:0,1,240	0/0:14,0:14:33.09:0,33,365	0/0:11,0:11:24.04:0,24,250	1/1:1,22:23:56.99:495,57,0	0/0:16,0:16:48.13:0,48,531	0/0:23,0:23:63.12:0,63,660	0/0:21,0:21:57.15:0,57,627	0/0:14,0:14:36.07:0,36,381	1/1:0,0:15:30.56:90,31,0	1/1:3,17:20:47.99:417,48,0	1/1:0,7:7:15:130,15,0	0/1:18,3:21:0.97:1,0,447	0/0:21,0:22:57.10:0,57,610	0/0:20,1:21:34.12:0,34,604	0/0:9,0:9:27.07:0,27,299
chr10	41726538	.	AAC	A	4371.63	PASS	AB=0.917;AC=13;AF=0.232;AN=56;BaseQRankSum=6.326;DP=1009;FS=14.769;HRun=0;HaplotypeScore=180.7013;InbreedingCoeff=0.7056;MQ=63.58;MQ0=4;MQRankSum=0.282;QD=22.30;ReadPosRankSum=2.963;VQSLOD=4.7532;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:54,1:55:99:0,101,2196	0/1:13,1:14:10.78:11,0,316	0/0:42,1:37:19.06:0,19,705	0/0:38,0:36:74.41:0,74,1231	0/0:40,0:40:99:0,105,1661	0/0:25,0:25:63.20:0,63,1005	0/0:31,1:32:43.35:0,43,1142	0/0:39,2:41:11.50:0,11,1185	0/0:39,0:39:62.93:0,63,1229	1/1:6,36:41:99:1289,105,0	1/1:3,19:22:51.16:644,51,0	0/0:42,1:43:61.44:0,61,1482	0/0:55,0:55:99:0,136,2107	0/0:46,2:48:59.72:0,60,2040	1/1:3,37:39:78.25:984,78,0	0/0:47,0:47:99:0,126,2062	0/0:31,1:32:37.35:0,37,1096	1/1:1,18:20:54:657,54,0	0/0:28,0:27:60.15:0,60,961	0/0:37,0:36:96.30:0,96,1541	0/0:71,0:71:99:0,175,2810	0/0:26,0:26:44.66:0,45,702	0/0:31,0:31:50.63:0,51,764	0/0:46,0:46:99:0,108,1658	1/1:2,22:23:60.19:757,60,0	0/0:36,0:36:99:0,102,1660	0/1:24,2:26:12.42:12,0,876	0/1:7,1:8:16.78:17,0,278
chr10	41726581	.	CACAA	C	7992.23	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=13.111;DP=1032;FS=3.291;HRun=0;HaplotypeScore=209.5865;InbreedingCoeff=0.9983;MQ=62.06;MQ0=3;MQRankSum=-3.304;QD=32.76;ReadPosRankSum=7.750;VQSLOD=4.5513;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:58:99:0,168,3981	0/0:14,0:14:42.14:0,42,1078	0/0:37,0:34:88.58:0,89,2128	0/0:47,0:42:94.28:0,94,2415	0/0:27,0:27:78.24:0,78,1953	0/0:20,0:20:57.15:0,57,1373	0/0:31,0:31:83.09:0,83,2094	0/0:47,0:47:99:0,129,3150	1/1:2,41:43:18.41:1695,18,0	0/0:39,0:39:99:0,111,2929	0/0:23,0:23:65.41:0,65,1583	1/1:3,34:37:59.93:1131,60,0	1/1:3,60:63:99:2297,123,0	0/0:42,0:42:99:0,123,3075	0/0:48,0:48:99:0,120,3021	0/0:53,0:53:99:0,160,4130	0/0:39,0:39:99:0,117,3017	0/0:20,0:20:57.13:0,57,1362	0/0:27,0:27:72.24:0,72,1849	0/0:31,0:31:80.28:0,80,1913	0/0:77,0:77:99:0,222,5418	1/1:0,35:34:31.63:623,32,0	1/1:1,23:24:30.96:571,31,0	1/1:1,41:42:90.31:1675,90,0	0/0:27,0:26:74.27:0,74,1843	0/0:42,0:39:99:0,117,3068	0/0:20,0:19:57.65:0,58,1386	0/0:17,0:17:51.16:0,51,1291
chr10	41727904	.	G	GCACACACA	2009.02	PASS	AB=0.929;AC=33;AF=0.635;AN=52;BaseQRankSum=-0.073;DP=471;FS=4.215;HRun=0;HaplotypeScore=153.7284;InbreedingCoeff=0.5097;MQ=64.57;MQ0=10;MQRankSum=-2.863;QD=6.74;ReadPosRankSum=-2.536;VQSLOD=2.2564;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:14,0:14:0:0,0,0	0/0:6,0:6:12.04:0,12,270	0/0:36,0:22:26.39:0,26,378	0/1:35,0:25:32.60:33,0,373	./.	0/1:12,6:17:0.10:0,0,0	1/1:21,0:17:10.45:120,10,0	1/1:22,0:21:9.03:205,9,0	1/1:12,0:13:9.03:228,9,0	0/0:22,0:22:39.57:0,40,761	0/0:24,0:24:9.03:0,9,183	1/1:18,0:18:4.37:75,4,0	1/1:8,0:12:6.02:133,6,0	1/1:22,0:22:6:85,6,0	0/0:26,0:26:9.03:0,9,170	1/1:15,0:15:15.05:329,15,0	1/1:5,0:9:3.01:70,3,0	0/0:15,0:15:30.10:0,30,691	1/1:13,0:12:15:323,15,0	1/1:10,0:10:3.01:72,3,0	1/1:13,0:12:2.93:41,3,0	1/1:10,0:10:3.01:68,3,0	1/1:10,0:10:3:25,3,0	0/1:15,2:17:0:0,0,0	0/0:21,0:21:36.08:0,36,737	0/1:15,0:15:15.70:244,0,16	1/1:10,0:10:6.02:124,6,0	./.
chr10	41727923	.	CACAGAGAGAGAGAGAGAG	C	1732.57	PASS	AB=1.000;AC=16;AF=0.286;AN=56;BaseQRankSum=-2.431;DP=401;FS=0.647;HRun=0;HaplotypeScore=155.7235;InbreedingCoeff=0.5188;MQ=41.24;MQ0=16;MQRankSum=3.015;QD=9.84;ReadPosRankSum=3.923;VQSLOD=2.5935;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:12,0:10:0.89:2,1,0	0/0:5,0:5:11.99:0,12,247	0/1:23,0:9:15.71:16,0,159	0/0:18,0:9:23.47:0,23,175	0/0:12,0:11:0:0,0,0	0/1:17,0:16:19.18:24,0,19	0/0:20,0:15:19.65:0,20,130	0/0:16,0:15:35.66:0,36,390	0/0:12,0:12:18.04:0,18,676	1/1:23,0:23:52.80:674,53,0	1/1:5,22:27:8.48:190,8,0	0/0:19,0:19:15.05:0,15,448	0/0:9,0:9:4.56:0,5,44	0/0:16,0:16:9:0,9,96	1/1:2,20:23:8.44:329,8,0	0/0:13,0:13:15:0,15,236	0/0:10,0:10:13.29:0,13,282	1/1:19,0:19:28.98:355,29,0	0/0:17,0:13:22.85:0,23,263	0/0:8,0:8:3.46:0,3,25	0/0:9,0:8:2.98:0,3,21	0/0:7,0:6:2.92:0,3,17	0/0:10,0:10:3:0,3,25	1/1:13,0:13:0.20:1,0,0	1/1:19,0:19:37.72:305,38,0	0/0:12,0:12:3.06:0,3,623	0/0:8,0:8:14.93:0,15,523	0/0:4,0:1:2.96:0,3,19
chr10	41727925	.	CAGAGAGAGAGAGAGAG	C	675.69	PASS	AB=0.909;AC=11;AF=0.239;AN=46;BaseQRankSum=2.729;DP=418;FS=13.582;HRun=0;HaplotypeScore=151.1883;InbreedingCoeff=0.4487;MQ=40.05;MQ0=18;MQRankSum=-2.968;QD=5.58;ReadPosRankSum=1.403;VQSLOD=2.2346;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:9:0.47:0,0,1	0/0:5,0:5:3.01:0,3,173	./.	./.	0/0:12,0:11:0:0,0,0	1/1:17,0:16:2.17:52,2,0	0/0:19,2:16:4.51:0,5,13	0/0:23,0:22:22.06:0,22,532	0/0:13,0:13:15.05:0,15,553	1/1:19,3:22:2.95:254,3,0	1/1:27,0:27:2.95:119,3,0	0/0:20,0:20:15.04:0,15,383	0/0:8,0:8:4.23:0,4,26	0/0:15,0:15:3.46:0,3,24	1/1:23,0:23:5.66:240,6,0	0/0:12,0:12:6.01:0,6,112	0/0:11,0:10:12.04:0,12,233	0/1:18,2:20:0.59:124,0,1	0/0:19,0:15:6.12:0,6,143	0/0:9,0:9:0.94:0,1,2	./.	./.	./.	1/1:11,0:10:0.37:1,0,0	0/0:15,4:19:0.94:0,1,2	0/0:15,0:15:27.09:0,27,996	0/0:9,0:10:9.03:0,9,520	0/0:5,0:2:3.01:0,3,141
chr10	41729625	.	CAGGCAGGCAGGA	C	2700.25	PASS	AB=1.000;AC=12;AF=0.214;AN=56;BaseQRankSum=4.180;DP=643;FS=36.086;HRun=0;HaplotypeScore=208.6753;InbreedingCoeff=0.3784;MQ=64.72;MQ0=5;MQRankSum=-5.658;QD=11.02;ReadPosRankSum=-3.409;VQSLOD=0.5160;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:9,32:41:30.03:814,30,0	0/0:8,0:8:15.05:0,15,632	0/0:21,0:13:17.95:0,18,430	0/0:14,0:13:33.10:0,33,1067	0/1:15,0:15:46.94:47,0,123	0/0:18,0:18:17.12:0,17,1123	0/0:27,0:27:8.96:0,9,2260	0/1:11,0:11:32.93:33,0,317	0/0:22,0:22:54.12:0,54,2214	0/0:18,0:18:39.12:0,39,1664	0/0:15,0:15:11.90:0,12,402	0/0:40,0:40:99:0,108,5070	0/0:20,0:20:48.08:0,48,2437	0/1:41,0:41:65.36:65,0,3091	0/0:27,0:27:63.22:0,63,3367	1/1:3,21:24:32.85:1187,33,0	1/1:10,30:40:23.73:629,24,0	0/0:18,0:18:51.03:0,51,1932	0/0:14,0:13:17:0,17,509	0/1:11,0:11:0.91:1,0,827	0/1:52,0:51:80.08:80,0,2037	0/0:29,0:29:51.10:0,51,1854	0/0:16,0:16:27:0,27,1313	0/0:49,0:48:99:0,126,5683	0/0:17,0:17:30.08:0,30,1381	0/1:10,0:10:7.41:7,0,646	0/0:22,0:22:33.66:0,34,2428	0/0:3,0:3:9.03:0,9,356
chr10	41729892	.	T	TA	2914.45	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-12.948;DP=875;FS=3.856;HRun=6;HaplotypeScore=101.5597;InbreedingCoeff=1.0000;MQ=79.91;MQ0=0;MQRankSum=-1.013;QD=30.36;ReadPosRankSum=-0.682;VQSLOD=3.2239;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,138,1388	0/0:18,0:18:51.09:0,51,512	0/0:23,0:23:54.09:0,54,539	0/0:22,0:22:51.52:0,52,499	0/0:27,0:27:81.16:0,81,813	0/0:32,0:32:87.18:0,87,882	0/0:31,0:31:81.17:0,81,820	0/0:38,0:38:99:0,105,1060	0/0:31,0:31:85.06:0,85,852	0/0:48,0:48:99:0,135,1358	0/0:26,0:25:72.15:0,72,728	1/1:3,31:34:81.26:1019,81,0	0/0:33,0:33:90.18:0,90,910	0/0:25,0:25:63.14:0,63,647	0/0:44,0:44:99:0,120,1223	0/0:43,0:43:99:0,129,1315	0/0:42,0:42:99:0,117,1176	0/0:28,0:28:66.14:0,66,673	0/0:21,0:21:48.09:0,48,480	0/0:22,0:22:57.11:0,57,576	0/0:43,0:43:99:0,111,1132	0/0:32,0:32:87.15:0,87,867	1/1:1,19:20:54.17:680,54,0	1/1:3,39:42:99:1359,108,0	0/0:29,0:29:69.14:0,69,699	0/0:33,0:33:90.16:0,90,895	0/0:20,0:20:51.10:0,51,515	0/0:18,0:18:51.06:0,51,508
chr10	41730693	.	A	AACAC	3897.17	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=11.183;DP=798;FS=1.645;HRun=0;HaplotypeScore=134.6865;InbreedingCoeff=0.9990;MQ=75.24;MQ0=0;MQRankSum=-11.906;QD=64.95;ReadPosRankSum=-0.393;VQSLOD=5.2140;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,108,2264	0/0:11,0:11:33.10:0,33,636	0/0:23,0:23:66.15:0,66,1182	0/0:11,0:11:30.10:0,30,547	0/0:30,0:30:84.29:0,84,1746	1/1:1,18:20:60.21:1378,60,0	1/1:2,25:27:75.26:1725,75,0	0/0:32,0:32:96.31:0,96,1932	0/0:27,0:27:78.27:0,78,1635	0/0:30,0:30:90.27:0,90,1750	0/0:22,0:22:66.23:0,66,1362	0/0:29,0:29:84.27:0,84,1708	0/0:44,0:44:99:0,123,2548	0/0:40,0:40:99:0,117,2386	0/0:35,0:35:96.28:0,96,1898	0/0:37,0:37:99:0,111,2283	1/1:2,11:13:39.11:794,39,0	0/0:23,0:23:69.16:0,69,1345	0/0:17,0:17:51.17:0,51,1030	0/0:29,0:29:87.28:0,87,1787	0/0:30,0:30:90.30:0,90,1833	0/0:37,0:37:99:0,108,2265	0/0:30,0:30:87.28:0,87,1765	0/0:40,0:40:99:0,117,2433	0/0:38,0:38:99:0,108,2266	0/0:31,0:31:93.31:0,93,1902	0/0:48,0:48:99:0,144,2966	0/0:8,0:8:24.07:0,24,465
chr10	41730695	.	TG	T	965.05	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=12.493;DP=802;FS=0.000;HRun=2;HaplotypeScore=92.5400;InbreedingCoeff=0.9987;MQ=74.67;MQ0=0;MQRankSum=-11.875;QD=16.08;ReadPosRankSum=0.820;VQSLOD=3.5666;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,111,1621	0/0:10,0:10:30.10:0,30,444	0/0:22,0:22:63.21:0,63,937	0/0:11,0:11:27.07:0,27,382	0/0:32,0:32:93.29:0,93,1340	1/1:3,19:22:62.06:411,62,0	1/1:1,24:26:70.71:457,71,0	0/0:32,0:32:96.31:0,96,1404	0/0:27,0:27:78.26:0,78,1168	0/0:29,0:29:87.27:0,87,1266	0/0:22,0:22:63.21:0,63,944	0/0:31,0:31:93.29:0,93,1353	0/0:42,0:42:99:0,123,1822	0/0:41,0:41:99:0,117,1710	0/0:35,0:35:99:0,105,1551	0/0:40,0:40:99:0,120,1739	1/1:1,11:12:35.56:240,36,0	0/0:21,0:21:63.21:0,63,935	0/0:19,0:19:57.18:0,57,818	0/0:29,0:29:84.28:0,84,1259	0/0:29,0:29:87.28:0,87,1278	0/0:37,0:37:99:0,111,1662	0/0:32,0:32:93.20:0,93,1320	0/0:41,0:41:99:0,120,1751	0/0:38,0:38:99:0,114,1706	0/0:30,0:30:90.30:0,90,1326	0/0:47,0:47:99:0,141,2087	0/0:8,0:8:24.08:0,24,360
chr10	41732706	.	G	GA	5329.32	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-13.208;DP=587;FS=24.932;HRun=10;HaplotypeScore=64.0392;InbreedingCoeff=0.9620;MQ=77.29;MQ0=0;MQRankSum=-2.457;QD=24.11;ReadPosRankSum=-2.109;VQSLOD=3.1913;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:53.91:0,54,440	0/0:6,0:6:14.98:0,15,123	0/0:22,0:22:38.92:0,39,320	0/0:13,0:15:31.03:0,31,231	1/1:2,23:26:62.91:629,63,0	0/0:28,0:28:62.90:0,63,517	0/0:19,0:19:50.93:0,51,419	1/1:6,26:32:75.16:790,75,0	0/0:18,0:18:47.91:0,48,389	0/0:24,0:24:59.90:0,60,493	0/0:13,1:14:6.96:0,7,264	0/0:12,0:12:26.96:0,27,222	0/0:28,0:28:74.91:0,75,616	1/1:2,21:23:26.31:487,26,0	0/0:20,0:21:52.96:0,53,422	0/0:21,0:21:50.92:0,51,416	0/0:22,0:22:62.91:0,63,517	0/0:16,1:17:4.47:0,4,239	1/1:4,23:27:72.17:759,72,0	1/1:6,22:28:32.46:539,32,0	1/1:1,14:15:36.09:384,36,0	0/0:12,0:12:29.96:0,30,246	0/0:17,0:17:47.94:0,48,394	0/0:12,0:13:38:0,38,301	0/0:33,0:33:83.85:0,84,686	1/1:6,24:30:53.40:741,53,0	1/1:5,24:30:65.73:680,66,0	1/1:0,10:10:30.08:320,30,0
chr10	41732962	.	AAGCG	A	2891.04	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=10.370;DP=695;FS=3.431;HRun=0;HaplotypeScore=111.7034;InbreedingCoeff=0.9995;MQ=85.95;MQ0=0;MQRankSum=-3.896;QD=49.00;ReadPosRankSum=0.547;VQSLOD=4.4926;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,111,3004	0/0:9,0:9:27.09:0,27,781	0/0:23,0:23:69.24:0,69,1863	0/0:24,0:23:68.72:0,69,1846	1/1:0,29:29:78.27:1633,78,0	0/0:30,0:30:90.31:0,90,2565	0/0:20,0:20:60.21:0,60,1741	0/0:27,0:27:78.27:0,78,2202	0/0:18,0:18:54.19:0,54,1488	0/0:31,0:31:93.32:0,93,2612	0/0:23,0:23:66.21:0,66,1780	0/0:21,0:21:60.21:0,60,1736	0/0:20,0:20:60.21:0,60,1656	1/1:0,30:30:66.23:1379,66,0	0/0:29,0:29:87.28:0,87,2384	0/0:23,0:23:69.24:0,69,1982	0/0:25,0:25:75.24:0,75,2092	0/0:17,0:17:51.17:0,51,1435	0/0:19,0:19:57.20:0,57,1603	0/0:40,0:40:99:0,120,3289	0/0:23,0:23:69.22:0,69,1839	0/0:25,0:25:75.26:0,75,2126	0/0:27,0:27:78.27:0,78,2249	0/0:28,0:28:84.29:0,84,2391	0/0:21,0:21:63.22:0,63,1786	0/0:28,0:28:84.29:0,84,2430	0/0:31,0:31:93.30:0,93,2604	0/0:17,0:17:51.18:0,51,1473
chr10	41734084	.	A	AT	1502.22	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-8.122;DP=577;FS=14.087;HRun=9;HaplotypeScore=61.1665;InbreedingCoeff=0.9828;MQ=81.08;MQ0=0;MQRankSum=-2.272;QD=25.04;ReadPosRankSum=2.476;VQSLOD=3.3229;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:77.87:0,78,663	0/0:5,0:5:12:0,12,104	0/0:19,0:19:38.79:0,39,328	0/0:14,0:12:18.81:0,19,158	0/0:2,0:21:33.38:0,33,104	0/0:21,0:21:53.96:0,54,465	0/0:25,0:25:71.97:0,72,622	0/0:41,0:41:89.94:0,90,778	0/0:25,1:26:32.79:0,33,509	0/0:21,0:21:56.97:0,57,491	0/0:23,0:23:62.98:0,63,546	1/1:3,18:21:48.13:531,48,0	0/0:26,0:26:71.93:0,72,616	0/0:2,0:14:20.37:0,20,60	0/0:23,0:23:62.97:0,63,543	0/0:14,0:14:41.99:0,42,365	0/0:13,0:13:32.99:0,33,286	0/0:14,0:14:41.95:0,42,357	0/0:13,0:13:26.97:0,27,230	0/0:30,0:30:65.94:0,66,568	0/0:17,0:19:43.98:0,44,362	0/0:13,0:13:35.99:0,36,310	1/1:0,18:18:48.13:531,48,0	1/1:4,16:21:56.77:583,57,0	0/0:29,0:28:80.95:0,81,697	0/0:26,0:26:68.47:0,68,582	0/0:30,0:30:68.93:0,69,595	0/0:7,0:7:21:0,21,182
chr10	41735370	.	T	TG	1055.44	PASS	AB=0.963;AC=7;AF=0.125;AN=56;BaseQRankSum=-2.995;DP=638;FS=0.621;HRun=7;HaplotypeScore=142.1326;InbreedingCoeff=0.9030;MQ=73.39;MQ0=0;MQRankSum=-1.716;QD=14.07;ReadPosRankSum=0.300;VQSLOD=2.1463;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:52.86:0,53,484	0/0:10,0:10:30.05:0,30,290	0/0:29,0:24:40.74:0,41,382	0/0:20,0:19:44.71:0,45,418	0/0:30,0:30:33.27:0,33,104	0/0:26,0:26:22.32:0,22,67	0/0:14,0:14:12.21:0,12,36	0/0:30,0:30:84.08:0,84,790	0/0:25,0:25:66.04:0,66,626	0/0:21,0:21:38.66:0,39,347	0/0:26,0:26:65.59:0,66,572	1/1:1,15:16:44.94:498,45,0	0/0:24,0:24:63.03:0,63,596	0/1:25,1:26:0.42:32,0,0	0/0:20,0:20:41.74:0,42,360	0/0:20,0:20:50.98:0,51,470	0/0:19,0:19:35.75:0,36,196	0/0:12,0:12:24.04:0,24,231	0/0:22,0:22:54.07:0,54,516	0/0:38,0:38:99:0,101,881	0/0:31,0:31:78.13:0,78,696	0/0:26,0:26:62.97:0,63,579	1/1:0,18:18:44.41:478,44,0	1/1:2,12:15:14.05:194,14,0	0/0:33,0:33:80.24:0,80,679	0/0:24,0:24:63.05:0,63,598	0/0:25,0:25:71.91:0,72,677	0/0:13,0:13:36.05:0,36,343
chr10	41735377	.	GT	G	1213.14	PASS	AB=0.893;AC=7;AF=0.125;AN=56;BaseQRankSum=3.302;DP=612;FS=3.951;HRun=2;HaplotypeScore=146.0815;InbreedingCoeff=0.8337;MQ=67.75;MQ0=5;MQRankSum=0.948;QD=12.91;ReadPosRankSum=-0.363;VQSLOD=2.5552;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:43.42:0,43,673	0/0:10,0:10:30.10:0,30,431	0/0:28,0:19:34.46:0,34,572	0/0:19,0:16:44.54:0,45,593	1/1:4,24:28:50.62:653,51,0	1/1:2,24:26:36.01:443,36,0	1/1:3,12:14:17.93:233,18,0	0/0:33,0:32:90.28:0,90,1243	0/0:24,0:24:69.20:0,69,905	0/0:15,0:15:45.11:0,45,621	0/0:25,0:25:63.54:0,64,810	0/0:15,0:15:41.60:0,42,291	0/0:22,0:22:66.12:0,66,819	0/1:22,3:25:15.55:32,0,16	0/0:16,0:16:36.12:0,36,507	0/0:18,0:18:48.58:0,49,651	0/0:16,0:16:33.64:0,34,169	0/0:10,0:10:24.08:0,24,337	0/0:23,0:22:57.65:0,58,786	0/0:38,0:38:93.20:0,93,1262	0/0:30,0:30:81.45:0,81,1025	0/0:25,0:25:56.96:0,57,742	0/0:22,0:22:36.04:0,36,313	0/0:15,0:15:15.17:0,15,96	0/0:31,0:31:77.96:0,78,958	0/0:23,0:23:63.67:0,64,881	0/0:25,0:25:72.67:0,73,983	0/0:12,0:12:36.10:0,36,496
chr10	41735378	.	T	TCTG	1468.82	PASS	AB=0.896;AC=11;AF=0.196;AN=56;BaseQRankSum=6.637;DP=648;FS=1.589;HRun=0;HaplotypeScore=195.5218;InbreedingCoeff=0.4260;MQ=65.16;MQ0=5;MQRankSum=-2.446;QD=7.27;ReadPosRankSum=-3.681;VQSLOD=2.7445;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:21.79:0,22,658	0/0:10,0:10:30.10:0,30,556	0/0:27,0:18:35.18:0,35,724	0/0:19,0:16:44.59:0,45,751	1/1:26,3:29:50.17:1060,50,0	1/1:29,0:29:37.66:274,38,0	1/1:16,0:15:17.42:84,17,0	0/0:32,0:31:90.30:0,90,1544	0/0:24,0:24:68.44:0,68,649	0/0:15,0:15:26.41:0,26,541	0/0:28,0:29:23.08:0,23,905	0/0:22,0:22:11.94:0,12,538	0/0:22,0:22:65.64:0,66,701	0/1:5,20:25:38.63:39,0,39	0/0:16,0:16:34:0,34,568	0/1:22,0:22:13.59:14,0,725	0/0:18,0:18:36.55:0,37,326	0/0:10,0:10:24.08:0,24,442	0/0:23,0:22:17.95:0,18,921	0/0:37,0:37:73.04:0,73,1486	0/0:30,0:30:77.85:0,78,1207	0/0:24,0:24:56.45:0,56,597	0/1:20,0:21:47.78:48,0,457	0/0:17,0:17:16.40:0,16,203	0/0:30,0:30:63.68:0,64,1137	0/1:28,0:28:49.06:49,0,1046	0/1:31,0:32:66.73:67,0,1114	0/0:12,0:12:35.47:0,35,588
chr10	41735382	.	GTCTA	G	1089.25	PASS	AC=6;AF=0.111;AN=54;BaseQRankSum=0.708;DP=675;FS=4.005;HRun=0;HaplotypeScore=199.7731;InbreedingCoeff=0.6471;MQ=61.28;MQ0=9;MQRankSum=2.169;QD=15.13;ReadPosRankSum=1.199;VQSLOD=3.2549;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:23.08:0,23,502	0/0:10,0:10:6.02:0,6,129	./.	0/0:17,0:14:0:0,0,0	0/0:28,0:28:0:0,0,0	0/0:29,0:29:3:0,3,27	0/0:16,0:15:0.89:0,1,2	0/0:35,0:32:0:0,0,0	1/1:16,9:24:21.07:318,21,0	0/0:10,0:19:35.13:0,35,575	0/0:28,0:28:14.65:0,15,232	0/0:22,0:23:5.99:0,6,77	1/1:13,10:23:36.11:525,36,0	0/0:32,0:32:5.94:0,6,50	0/0:14,0:23:9.03:0,9,152	0/0:22,0:22:11.55:0,12,199	0/0:19,0:19:12.02:0,12,166	0/0:11,0:11:5.23:0,5,76	0/0:23,0:22:15.05:0,15,309	0/0:31,0:39:15.05:0,15,266	0/0:29,0:29:12.04:0,12,218	1/1:11,13:24:27.01:380,27,0	0/0:16,0:20:24.08:0,24,476	0/0:17,0:17:8.99:0,9,111	0/0:28,0:33:6.01:0,6,78	0/0:29,0:28:30.10:0,30,635	0/0:31,0:31:24.99:0,25,345	0/0:12,0:16:21.04:0,21,371
chr10	41735412	.	CT	C	84.29	PASS	AB=0.870;AC=2;AF=0.036;AN=56;BaseQRankSum=3.798;DP=681;FS=0.000;HRun=1;HaplotypeScore=166.4516;InbreedingCoeff=-0.0422;MQ=50.68;MQ0=24;MQRankSum=-2.169;QD=2.63;ReadPosRankSum=-0.191;VQSLOD=-0.7179;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:51.15:0,51,725	0/0:7,0:7:21.06:0,21,302	0/0:7,1:2:5.98:0,6,66	0/0:12,0:3:6.02:0,6,86	0/0:27,0:27:41.70:0,42,590	0/0:30,0:30:36.12:0,36,539	0/0:24,0:22:32.39:0,32,539	0/0:36,0:23:69.22:0,69,1011	0/0:27,0:26:63.89:0,64,798	0/0:26,0:24:72.22:0,72,1047	0/0:26,0:26:51.05:0,51,735	0/0:20,0:20:33.10:0,33,489	0/0:27,0:27:67.61:0,68,745	0/0:35,0:35:38.70:0,39,567	0/0:28,0:28:51.15:0,51,715	0/0:22,0:22:45.23:0,45,671	0/1:13,7:20:99:158,0,233	0/1:12,0:12:7.65:8,0,338	0/0:20,0:16:48.16:0,48,714	0/0:43,0:43:99:0,99,1393	0/0:21,0:21:42.61:0,43,631	0/0:28,0:28:62.48:0,62,723	0/0:22,0:22:54.17:0,54,768	0/0:20,0:20:32.79:0,33,424	0/0:32,0:31:54.17:0,54,781	0/0:28,0:27:78.25:0,78,1155	0/0:26,0:26:69.12:0,69,1032	0/0:22,0:22:57.17:0,57,833
chr10	41736221	.	TTAGTGGTACAACCATC	T	20400.67	PASS	AB=0.581;AC=23;AF=0.411;AN=56;BaseQRankSum=16.742;DP=596;FS=0.347;HRun=0;HaplotypeScore=281.6194;InbreedingCoeff=0.9125;MQ=84.97;MQ0=3;MQRankSum=-15.999;QD=91.89;ReadPosRankSum=0.555;VQSLOD=4.0211;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,135,9821	0/0:13,0:13:39.13:0,39,3037	0/0:28,0:28:78.24:0,78,4204	0/0:17,0:17:48.03:0,48,2562	1/1:2,19:21:54.19:1911,54,0	1/1:8,21:29:75.21:3143,75,0	1/1:5,7:11:8.99:304,9,0	1/1:5,17:22:51.14:1844,51,0	0/0:32,0:32:93.31:0,93,6569	0/0:24,0:24:69.24:0,69,4928	0/0:11,0:11:30.10:0,30,1966	0/0:30,0:30:90.31:0,90,6944	0/0:28,0:28:84.29:0,84,5670	1/1:3,15:16:45.15:2120,45,0	0/0:25,0:25:72.25:0,72,5563	0/0:18,0:18:54.19:0,54,3696	1/1:8,8:15:21.54:994,22,0	0/0:12,0:12:33.11:0,33,2620	1/1:4,13:17:39.13:1546,39,0	1/1:2,16:18:48.16:2033,48,0	1/1:8,9:17:24.08:941,24,0	0/0:22,0:22:66.23:0,66,5238	0/0:20,0:20:60.19:0,60,3829	0/0:26,0:26:78.27:0,78,5632	0/0:21,0:21:60.21:0,60,4264	0/1:7,18:25:99:2615,0,413	1/1:4,16:20:51.18:2406,51,0	1/1:3,4:7:12.04:543,12,0
chr10	41736314	.	AGG	A	10758.16	PASS	AB=0.764;AC=22;AF=0.393;AN=56;BaseQRankSum=15.667;DP=584;FS=22.790;HRun=2;HaplotypeScore=95.0883;InbreedingCoeff=0.8647;MQ=79.89;MQ0=0;MQRankSum=-6.592;QD=42.86;ReadPosRankSum=-2.269;VQSLOD=3.0644;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:87.30:0,87,1698	0/0:13,0:13:39.13:0,39,759	0/0:24,0:25:40.21:0,40,1200	0/0:21,0:21:52.36:0,52,853	1/1:0,24:24:63.17:998,63,0	1/1:0,29:29:84.29:1352,84,0	1/1:0,14:14:39.13:627,39,0	1/1:0,34:34:99:1645,102,0	0/0:18,0:18:54.19:0,54,1050	0/0:25,0:25:75.26:0,75,1465	0/0:15,0:15:45.15:0,45,884	0/0:26,0:26:78.25:0,78,1498	0/0:16,0:16:45.15:0,45,884	1/1:1,17:17:51.14:804,51,0	0/0:27,0:27:81.28:0,81,1588	0/0:23,0:23:69.24:0,69,1348	0/1:13,0:13:21.42:21,0,77	0/0:13,0:13:39.13:0,39,763	1/1:0,16:16:48.09:719,48,0	0/1:2,17:19:1.82:795,0,2	1/1:0,13:13:39.09:607,39,0	0/0:16,0:16:48.15:0,48,900	0/0:17,0:17:51.17:0,51,993	0/0:21,0:21:63.22:0,63,1237	0/0:28,0:28:84.29:0,84,1620	1/1:2,39:41:5.81:1761,6,0	1/1:0,23:23:69.24:1116,69,0	1/1:0,7:7:21.03:313,21,0
chr10	41736483	.	ATT	A	6540.62	PASS	AB=0.536;AC=21;AF=0.375;AN=56;BaseQRankSum=15.341;DP=441;FS=14.221;HRun=3;HaplotypeScore=65.8915;InbreedingCoeff=0.9066;MQ=79.74;MQ0=0;MQRankSum=-5.202;QD=38.70;ReadPosRankSum=1.737;VQSLOD=3.4760;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:90.27:0,90,1664	0/0:12,0:12:36.12:0,36,695	0/0:18,0:18:48.16:0,48,924	0/0:8,0:8:21.07:0,21,392	1/1:0,19:19:54.18:822,54,0	1/1:0,10:10:24.08:367,24,0	1/1:1,13:14:33.11:505,33,0	1/1:6,30:36:90.29:1355,90,0	0/0:22,0:22:66.19:0,66,1237	0/0:22,0:22:66.23:0,66,1276	0/0:15,0:15:45.15:0,45,870	0/0:16,0:16:48.16:0,48,921	0/0:14,0:13:36.12:0,36,686	1/1:0,16:16:42.14:643,42,0	0/0:14,0:14:42.14:0,42,802	0/0:16,0:16:48.16:0,48,893	0/0:0,0:7:5.85:0,6,35	0/0:19,0:19:54.19:0,54,1024	1/1:0,11:11:30.10:459,30,0	1/1:2,14:16:39.13:597,39,0	1/1:0,11:11:27.09:413,27,0	0/0:8,0:8:24.08:0,24,464	0/0:17,0:17:51.17:0,51,973	0/0:11,0:11:33.11:0,33,631	0/0:23,0:23:69.24:0,69,1323	0/1:2,13:15:73.71:506,0,74	1/1:0,13:13:33.11:505,33,0	1/1:0,8:8:24.08:367,24,0
chr10	41736606	.	C	CGT	2960.62	PASS	AB=0.629;AC=43;AF=0.827;AN=52;BaseQRankSum=1.575;DP=574;FS=1.685;HRun=0;HaplotypeScore=169.4091;InbreedingCoeff=0.3438;MQ=65.30;MQ0=7;MQRankSum=-4.127;QD=6.37;ReadPosRankSum=1.180;VQSLOD=3.5469;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:32,0:30:6.02:70,6,0	0/0:11,0:12:26.91:0,27,292	0/0:43,0:29:16.80:0,17,196	0/0:25,0:17:22.68:0,23,245	./.	1/1:10,0:10:2.98:21,3,0	1/1:21,0:21:3:26,3,0	1/1:24,0:22:11.68:89,12,0	1/1:20,0:22:3.88:28,4,0	1/1:14,0:13:11.43:84,11,0	./.	0/1:11,14:24:4.74:383,0,5	1/1:25,0:23:21.40:183,21,0	1/1:21,0:22:9.01:92,9,0	1/1:22,0:22:6.01:65,6,0	1/1:23,1:26:11.99:105,12,0	1/1:20,0:19:5.75:50,6,0	1/1:18,0:18:14.73:138,15,0	1/1:10,0:10:9.01:91,9,0	1/1:16,0:16:3:26,3,0	1/1:17,0:16:3.01:38,3,0	1/1:15,0:13:8.99:76,9,0	0/1:9,10:19:7.72:347,0,8	0/1:12,24:39:67.06:844,0,67	1/1:19,0:18:6:67,6,0	1/1:19,0:19:22.75:209,23,0	1/1:20,0:20:5.98:48,6,0	1/1:7,0:9:5.21:31,5,0
chr10	41737570	.	A	AT	6568.72	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-13.338;DP=678;FS=4.161;HRun=9;HaplotypeScore=61.9597;InbreedingCoeff=0.9930;MQ=76.00;MQ0=0;MQRankSum=-0.556;QD=25.26;ReadPosRankSum=-1.845;VQSLOD=5.0020;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:86.93:0,87,752	0/0:12,0:12:29.97:0,30,257	0/0:18,0:18:29.97:0,30,260	0/0:14,0:15:18.27:0,18,184	1/1:2,26:28:72.08:757,72,0	1/1:3,24:27:31.10:571,31,0	1/1:1,19:20:48.13:531,48,0	1/1:8,25:34:77.99:815,78,0	0/0:28,0:28:71.96:0,72,621	0/0:26,0:26:68.96:0,69,594	0/0:18,0:18:44.97:0,45,391	0/0:25,0:25:71.96:0,72,621	0/0:21,0:21:59.96:0,60,517	1/1:1,24:25:63.17:697,63,0	0/0:33,0:33:95.95:0,96,830	0/0:25,0:25:68.98:0,69,599	0/0:37,0:37:92.97:0,93,807	0/0:15,0:16:41.02:0,41,345	1/1:4,18:22:48.09:509,48,0	1/1:3,13:16:33.05:352,33,0	1/1:2,17:19:45.12:498,45,0	0/0:28,0:28:68.95:0,69,595	0/0:18,0:18:47.97:0,48,417	0/0:35,0:35:92.96:0,93,807	0/0:30,0:30:80.94:0,81,699	1/1:4,19:23:11:548,11,0	1/1:3,31:35:90.24:993,90,0	1/1:2,9:11:27.07:299,27,0
chr10	41738147	.	TCTGCTG	T	11230.45	PASS	AB=0.892;AC=42;AF=0.778;AN=54;BaseQRankSum=6.119;DP=650;FS=2.262;HRun=0;HaplotypeScore=165.5695;InbreedingCoeff=0.6996;MQ=65.58;MQ0=2;MQRankSum=-10.974;QD=22.02;ReadPosRankSum=0.838;VQSLOD=4.4723;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:32,8:40:25.18:178,0,25	0/0:8,0:8:18.06:0,18,586	0/0:29,0:24:30.06:0,30,838	0/1:17,0:17:0.52:1,0,373	./.	1/1:10,2:12:9.03:185,9,0	1/1:13,15:28:33.11:688,33,0	1/1:12,10:22:30.07:550,30,0	1/1:12,17:29:42.14:885,42,0	1/1:14,5:19:15.05:315,15,0	1/1:12,2:14:6.02:126,6,0	0/0:39,0:39:87.30:0,87,2756	1/1:7,23:30:66.23:1366,66,0	1/1:13,26:39:69.24:1418,69,0	1/1:12,31:44:69.24:1433,69,0	1/1:12,20:32:54.18:1139,54,0	1/1:9,10:19:18.06:378,18,0	1/1:2,9:11:18.06:353,18,0	1/1:16,5:21:15.02:270,15,0	1/1:8,2:10:6.02:126,6,0	1/1:23,11:34:15.48:294,15,0	1/1:13,0:13:2.98:49,3,0	0/0:14,0:14:6.02:0,6,108	0/0:35,0:36:86.83:0,87,2638	1/1:14,3:17:5.99:126,6,0	1/1:21,3:24:8.07:188,8,0	1/1:7,14:21:33.11:696,33,0	1/1:3,9:12:24.06:465,24,0
chr10	41738620	.	CTTGT	C	3045.32	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=1.978;DP=766;FS=9.888;HRun=0;HaplotypeScore=186.0337;InbreedingCoeff=0.9971;MQ=78.51;MQ0=0;MQRankSum=-3.831;QD=33.84;ReadPosRankSum=2.287;VQSLOD=3.1089;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,120,2910	0/0:16,0:16:45.14:0,45,1094	0/0:26,0:25:41.69:0,42,794	0/0:29,0:29:71.78:0,72,1491	0/0:34,0:34:90.28:0,90,2242	0/0:21,0:21:57.20:0,57,1455	0/0:29,0:29:78.27:0,78,1908	0/0:32,0:32:63.20:0,63,1374	1/1:2,24:26:60.21:1051,60,0	0/0:27,0:27:63.19:0,63,1518	0/0:19,0:19:51.16:0,51,1202	0/0:24,0:24:63.22:0,63,1605	1/1:3,29:32:60.21:1049,60,0	0/0:28,0:28:78.23:0,78,1930	0/0:32,0:32:93.27:0,93,2219	0/0:24,0:24:63.19:0,63,1471	0/0:33,0:33:78.22:0,78,1827	0/0:26,0:26:64.40:0,64,1518	0/0:23,0:23:51.18:0,51,1303	0/0:29,0:29:72.21:0,72,1732	0/0:36,0:36:99:0,99,2372	1/1:4,28:32:66.22:1088,66,0	0/0:23,0:23:63.14:0,63,1423	0/0:32,0:32:96.30:0,96,2307	0/0:29,0:29:75.25:0,75,1824	0/0:28,0:28:69.24:0,69,1660	0/0:24,0:24:72.15:0,72,1612	0/0:8,0:8:18.06:0,18,456
chr10	41740826	.	C	CTTTTTTTTT	6817.38	PASS	AB=0.944;AC=50;AF=0.893;AN=56;BaseQRankSum=2.077;DP=393;FS=0.000;HRun=11;HaplotypeScore=236.7594;InbreedingCoeff=0.5606;MQ=59.08;MQ0=12;MQRankSum=-5.035;QD=18.68;ReadPosRankSum=-3.189;VQSLOD=-0.0790;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:12,0:11:0.79:14,0,1	0/0:11,0:11:26.87:0,27,632	0/0:16,0:14:26.56:0,27,401	0/1:5,0:8:4.45:4,0,113	1/1:31,0:24:36.05:605,36,0	1/1:8,0:8:4.05:32,4,0	1/1:15,0:15:9.85:29,10,0	1/1:24,0:20:37.12:575,37,0	1/1:7,0:7:8.51:28,9,0	1/1:15,0:13:22.76:93,23,0	1/1:8,0:8:12.08:38,12,0	1/1:6,0:5:6.19:26,6,0	1/1:9,0:9:20.12:73,20,0	1/1:15,0:13:26.94:485,27,0	1/1:15,0:15:22.63:76,23,0	1/1:10,0:10:18.73:70,19,0	1/1:7,0:7:9.75:38,10,0	1/1:10,0:9:13.87:59,14,0	1/1:21,0:21:45.14:896,45,0	1/1:6,16:27:12.04:318,12,0	1/1:7,0:6:9.03:136,9,0	1/1:11,0:10:6.65:36,7,0	1/1:11,0:11:7.87:19,8,0	1/1:9,0:8:10.06:38,10,0	1/1:9,0:9:12.72:40,13,0	1/1:26,0:24:68.63:1531,69,0	1/1:31,0:28:44.12:1014,44,0	1/1:11,0:10:24.08:542,24,0
chr10	41742754	.	AACACACACACACACACACACAC	A	3493.79	PASS	AB=0.909;AC=27;AF=0.500;AN=54;BaseQRankSum=6.647;DP=586;FS=0.771;HRun=0;HaplotypeScore=243.1153;InbreedingCoeff=0.1324;MQ=59.75;MQ0=41;MQRankSum=-3.065;QD=10.19;ReadPosRankSum=0.503;VQSLOD=2.5093;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	0/0:7,0:7:15.05:0,15,1038	0/1:59,0:20:2.77:3,0,327	0/0:73,0:29:9.52:0,10,184	0/0:15,0:25:12.04:0,12,476	0/0:16,0:21:18.03:0,18,643	0/0:21,0:29:18.06:0,18,993	0/0:20,0:19:3.01:0,3,149	0/1:7,0:9:21.67:68,0,22	0/1:15,0:16:99:112,0,170	0/0:7,0:7:1.55:0,2,4	1/1:12,0:21:10.28:387,10,0	0/1:16,0:19:99:229,0,117	0/1:9,0:11:6.74:7,0,214	0/1:18,0:16:42.14:121,0,42	1/1:22,0:22:6.02:331,6,0	0/1:18,0:18:42.56:43,0,221	0/0:11,0:9:6.01:0,6,86	0/1:14,0:13:43.95:61,0,44	1/1:10,7:16:0.47:1,0,0	1/1:14,0:13:3.47:26,3,0	0/0:20,0:20:0.21:0,0,1	1/1:19,0:17:0.47:1,0,0	0/1:13,0:15:14.98:40,0,15	1/1:13,0:14:2.97:20,3,0	1/1:10,8:17:27.08:947,27,0	1/1:15,8:23:18.06:790,18,0	1/1:5,0:4:6.02:307,6,0
chr10	41742774	.	CACACACACACACACACACACACAGAGAGAGAG	C	3758.08	PASS	AB=1.000;AC=28;AF=0.519;AN=54;BaseQRankSum=7.090;DP=461;FS=3.704;HRun=0;HaplotypeScore=221.2916;InbreedingCoeff=-0.1130;MQ=39.07;MQ0=54;MQRankSum=-2.696;QD=13.00;ReadPosRankSum=3.693;VQSLOD=2.1229;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/0:7,0:7:18.06:0,18,1262	0/0:24,0:3:9.02:0,9,339	0/0:38,0:5:12.02:0,12,187	0/0:24,0:23:12.04:0,12,476	0/0:23,0:20:21.04:0,21,954	0/0:30,0:25:19.78:0,20,996	0/0:9,0:7:3.01:0,3,149	0/1:14,0:12:27.29:27,0,76	0/1:9,0:9:99:253,0,164	1/1:9,0:9:3.01:65,3,0	0/1:23,0:22:56.57:386,0,57	0/1:21,0:21:99:319,0,164	0/1:10,0:10:15.03:15,0,258	0/1:22,0:19:42.07:166,0,42	1/1:7,13:19:5.94:489,6,0	0/1:21,0:16:25.16:25,0,298	0/1:9,0:7:69.74:70,0,92	0/1:5,0:3:43.95:61,0,44	1/1:12,0:11:0.47:1,0,0	1/1:15,0:6:3.47:26,3,0	1/1:21,0:20:2.73:31,3,0	1/1:21,0:18:0.91:4,1,0	0/1:14,0:13:14.98:40,0,15	1/1:10,0:9:2.84:14,3,0	0/1:14,0:13:99:802,0,115	0/1:13,0:12:50.59:714,0,51	1/1:5,0:2:6.02:251,6,0
chr10	41742776	.	CACACACACACACACACACACAGAGAG	C	3862.17	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=7.395;DP=451;FS=2.545;HRun=0;HaplotypeScore=189.3670;InbreedingCoeff=-0.0283;MQ=37.77;MQ0=51;MQRankSum=-3.218;QD=13.55;ReadPosRankSum=3.603;VQSLOD=2.8247;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:16:0.47:0,0,1	0/0:8,0:8:18.06:0,18,1065	0/0:19,0:3:6.02:0,6,262	0/0:31,0:4:8.98:0,9,88	0/0:25,0:24:15.02:0,15,401	0/0:22,0:19:15.05:0,15,686	0/0:31,0:25:19.77:0,20,849	0/0:10,0:8:3.01:0,3,127	0/1:14,0:12:12.77:99,0,13	0/1:9,0:9:63.13:238,0,63	1/1:9,0:9:3.01:47,3,0	1/1:21,0:20:15.01:510,15,0	0/1:21,0:21:56.48:419,0,56	0/1:10,0:10:15.63:16,0,152	0/1:23,0:20:12.51:170,0,13	1/1:17,0:15:6.02:364,6,0	0/1:21,0:16:43.40:43,0,181	0/1:9,0:7:36.81:52,0,37	0/1:8,0:6:36.07:36,0,108	1/1:10,0:9:0.38:1,0,0	1/1:15,0:6:0.94:2,1,0	1/1:23,0:22:2.52:57,3,0	1/1:7,13:17:1.14:2,1,0	1/1:16,0:15:6.02:97,6,0	1/1:10,0:9:3.01:37,3,0	0/1:11,0:10:60.81:748,0,61	0/1:11,0:11:72.69:628,0,73	0/1:7,0:4:99:297,0,141
chr10	41742778	.	CACACACACACACACACACAGAGAGAGAGAG	C	3811.54	PASS	AB=1.000;AC=29;AF=0.537;AN=54;BaseQRankSum=6.497;DP=438;FS=2.755;HRun=0;HaplotypeScore=198.6078;InbreedingCoeff=0.0879;MQ=37.75;MQ0=50;MQRankSum=-3.372;QD=14.44;ReadPosRankSum=3.563;VQSLOD=2.7715;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:16:0.47:0,0,1	0/0:8,0:8:18.06:0,18,1020	0/0:17,0:2:6.02:0,6,211	./.	0/0:26,0:25:18.02:0,18,391	0/0:22,0:19:18.06:0,18,928	0/0:32,0:26:22.43:0,22,836	0/0:10,0:8:3.01:0,3,105	0/1:13,0:11:69.37:107,0,69	1/1:9,0:9:15.04:432,15,0	1/1:3,6:9:3.01:99,3,0	0/1:16,0:15:42.55:372,0,43	1/1:19,0:19:17.11:508,17,0	0/1:10,0:10:17.12:17,0,142	1/1:9,13:19:2.53:239,3,0	1/1:17,0:15:6.02:411,6,0	0/1:21,0:16:62.01:62,0,148	0/1:8,0:6:1.33:131,0,1	0/1:7,0:6:18:18,0,166	0/0:12,0:11:2.38:0,2,68	1/1:17,0:7:0.47:1,0,0	1/1:23,0:22:2.56:33,3,0	1/1:19,0:16:1.37:2,1,0	1/1:14,0:13:5.99:49,6,0	1/1:11,0:10:2.96:19,3,0	0/1:11,0:10:99:551,0,141	0/1:11,0:11:99:537,0,219	0/1:7,0:4:99:223,0,289
chr10	41742780	.	CACACACACACACACACAGAGAGAGAG	C	3692.94	PASS	AB=1.000;AC=30;AF=0.556;AN=54;BaseQRankSum=6.791;DP=426;FS=4.155;HRun=0;HaplotypeScore=177.8169;InbreedingCoeff=0.1395;MQ=37.91;MQ0=50;MQRankSum=-4.405;QD=14.48;ReadPosRankSum=3.546;VQSLOD=2.6593;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:16:0.47:0,0,1	0/0:8,0:8:18.06:0,18,832	0/0:16,0:2:6.02:0,6,161	./.	0/0:26,0:25:3.85:0,4,200	0/0:23,0:20:18.06:0,18,749	0/0:32,0:26:22.42:0,22,661	0/0:13,0:11:3.01:0,3,84	0/1:13,0:11:50.09:171,0,50	1/1:5,0:5:12.51:324,13,0	1/1:9,0:9:3.01:82,3,0	1/1:17,0:16:2.35:342,2,0	1/1:10,0:19:20.95:663,21,0	0/1:9,0:9:17.25:17,0,59	1/1:19,0:16:2.52:183,3,0	1/1:17,0:15:6.02:372,6,0	0/1:22,0:17:93.12:108,0,93	0/1:8,0:6:0.74:90,0,1	0/1:6,0:5:0.49:0,0,128	0/0:12,0:11:2.47:0,2,37	1/1:18,0:8:0.47:1,0,0	1/1:5,16:20:2.52:91,3,0	1/1:19,0:16:1.14:2,1,0	1/1:13,0:12:0.89:2,1,0	1/1:11,0:10:3.01:37,3,0	0/1:11,0:10:99:535,0,117	0/1:11,0:11:99:448,0,144	0/1:7,0:4:99:224,0,217
chr10	41742796	.	CAGAGAGAGAG	C	1192.28	PASS	AB=0.894;AC=21;AF=0.420;AN=50;BaseQRankSum=4.059;DP=428;FS=41.269;HRun=0;HaplotypeScore=154.4394;InbreedingCoeff=0.5359;MQ=39.43;MQ0=40;MQRankSum=1.263;QD=6.15;ReadPosRankSum=2.666;VQSLOD=1.4799;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:22,1:20:0.47:1,0,0	0/0:7,0:7:3.01:0,3,109	./.	./.	1/1:23,1:23:9.03:154,9,0	0/0:26,0:24:12.04:0,12,413	0/0:33,0:27:15.02:0,15,560	0/0:21,0:19:22.57:0,23,516	0/0:8,6:12:3.90:0,4,58	1/1:2,0:8:17.90:295,18,0	1/1:6,0:9:3.01:82,3,0	0/1:17,0:19:17.72:93,0,18	1/1:16,2:17:9.03:257,9,0	./.	1/1:17,0:16:2.60:70,3,0	1/1:17,0:15:6.02:150,6,0	0/0:21,0:18:18.29:0,18,202	1/1:6,0:5:4.02:160,4,0	0/0:12,0:10:13.96:0,14,318	0/0:15,0:14:2.38:0,2,37	0/0:18,0:10:2.38:0,2,88	1/1:18,1:19:3.01:83,3,0	0/1:17,0:15:0.66:1,0,1	0/1:10,1:12:0:0,0,0	0/0:3,2:12:0:0,0,0	0/0:17,0:16:25.33:0,25,841	0/0:17,0:16:21.54:0,22,611	0/0:10,0:7:14.22:0,14,304
chr10	41743002	.	A	AC	874.68	PASS	AB=0.964;AC=19;AF=0.339;AN=56;BaseQRankSum=15.224;DP=544;FS=216.213;HRun=2;HaplotypeScore=196.3965;InbreedingCoeff=0.2844;MQ=72.02;MQ0=2;MQRankSum=-14.960;QD=3.58;ReadPosRankSum=3.177;VQSLOD=-0.4762;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:20,0:20:15.35:106,0,15	0/0:9,0:9:27.09:0,27,375	0/0:14,0:14:41.90:0,42,521	0/0:20,0:20:60.18:0,60,785	0/0:21,0:21:57.19:0,57,797	0/0:23,0:23:60.17:0,60,798	0/0:24,0:24:69.22:0,69,943	0/0:34,0:34:87.27:0,87,1177	0/1:20,0:20:29.48:54,0,29	0/1:18,0:18:47.77:48,0,301	0/1:19,0:18:2.80:45,0,3	1/1:16,0:16:2.85:56,3,0	0/1:16,0:16:5.12:43,0,5	0/0:20,0:20:60.20:0,60,835	0/1:14,2:16:16.19:77,0,16	1/1:17,0:17:12.27:119,12,0	1/1:17,1:18:11.26:176,11,0	1/1:6,0:6:7.99:35,8,0	0/0:23,0:23:69.22:0,69,933	0/0:32,0:32:96.28:0,96,1319	0/0:21,0:21:63.18:0,63,841	0/1:16,0:16:20.43:72,0,20	1/1:16,0:15:17.26:100,17,0	0/1:11,4:15:24:24,0,44	0/1:31,0:31:25.95:101,0,26	0/0:20,0:20:43.46:0,43,760	0/0:33,0:33:99:0,99,1364	0/0:6,0:6:18.06:0,18,252
chr10	41743400	.	T	TC	1556.32	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.919;DP=633;FS=5.327;HRun=1;HaplotypeScore=66.1167;InbreedingCoeff=0.9956;MQ=89.85;MQ0=0;MQRankSum=-2.602;QD=40.96;ReadPosRankSum=0.103;VQSLOD=4.1252;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,111,1499	0/0:10,0:10:30.10:0,30,419	0/0:26,0:26:78.21:0,78,1002	0/0:25,0:25:68.19:0,68,900	0/0:26,0:26:78.26:0,78,1091	1/1:1,16:17:45.15:719,45,0	1/1:1,20:21:60.20:959,60,0	0/0:31,0:31:84.28:0,84,1174	0/0:21,0:21:60.20:0,60,838	0/0:20,0:20:57.19:0,57,797	0/0:17,0:17:45.15:0,45,629	0/0:24,0:24:69.19:0,69,939	0/0:18,0:18:54.18:0,54,755	0/0:19,0:19:54.12:0,54,685	0/0:42,0:42:99:0,126,1760	0/0:23,0:23:69.20:0,69,930	0/0:19,0:19:57.19:0,57,790	0/0:14,0:14:42.14:0,42,587	0/0:16,0:16:45.15:0,45,629	0/0:18,0:18:54.18:0,54,755	0/0:33,0:33:99:0,99,1366	0/0:19,0:19:57.19:0,57,797	0/0:25,0:25:75.25:0,75,1044	0/0:28,0:28:84.28:0,84,1175	0/0:21,0:21:51.16:0,51,708	0/0:24,0:24:69.23:0,69,965	0/0:31,0:31:93.31:0,93,1299	0/0:7,0:7:18.06:0,18,252
chr10	41744714	.	G	GTT	7106.64	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-14.833;DP=777;FS=0.333;HRun=7;HaplotypeScore=86.2874;InbreedingCoeff=0.9996;MQ=81.79;MQ0=0;MQRankSum=-2.526;QD=41.32;ReadPosRankSum=1.906;VQSLOD=4.4164;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,117,1350	0/0:11,0:11:30.09:0,30,348	0/0:27,0:27:59.34:0,59,720	0/0:20,0:20:39.16:0,39,454	0/0:34,0:34:90.24:0,90,1036	0/0:28,0:28:78.19:0,78,885	0/0:32,0:32:87.19:0,87,979	0/0:32,0:32:87.20:0,87,981	1/1:2,24:27:60.20:979,60,0	0/0:21,0:21:60.18:0,60,699	0/0:22,0:22:63.19:0,63,733	1/1:2,27:29:78.22:1251,78,0	1/1:2,28:30:81.23:1300,81,0	0/0:42,0:42:99:0,117,1340	0/0:35,0:35:90.25:0,90,1048	0/0:28,1:29:28.96:0,29,813	0/0:23,0:23:63.16:0,63,721	0/0:17,0:17:51.15:0,51,592	0/0:20,0:20:54.15:0,54,614	0/0:32,0:32:90.26:0,90,1045	0/0:40,0:40:99:0,114,1328	1/1:2,29:32:82.47:1282,82,0	1/1:2,26:30:78.07:1260,78,0	1/1:1,23:24:63.22:1034,63,0	0/0:20,0:20:51.14:0,51,594	0/0:31,0:31:81.24:0,81,944	0/0:34,0:33:99:0,99,1109	0/0:12,0:12:30.08:0,30,350
chr10	41745257	.	AG	A	4504.43	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=12.798;DP=334;FS=41.768;HRun=1;HaplotypeScore=113.1623;InbreedingCoeff=0.9518;MQ=64.16;MQ0=2;MQRankSum=-13.825;QD=22.75;ReadPosRankSum=-0.289;VQSLOD=2.1996;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,16:20:53.89:450,54,0	0/0:5,0:5:15.01:0,15,167	0/0:19,0:16:21.67:0,22,261	0/0:13,1:11:15.76:0,16,251	1/1:3,11:14:35.76:277,36,0	1/1:2,8:10:26.89:211,27,0	1/1:0,7:7:20.98:176,21,0	1/1:4,13:17:44.96:393,45,0	1/1:4,6:10:29.85:233,30,0	0/0:22,0:22:66.17:0,66,759	0/0:18,0:17:51.15:0,51,612	1/1:1,10:11:32.92:267,33,0	1/1:2,4:6:17.92:140,18,0	1/1:1,5:6:14.99:130,15,0	0/0:20,0:20:60.15:0,60,706	1/1:1,5:6:17.97:151,18,0	1/1:2,3:5:11.93:94,12,0	0/0:17,0:17:51.06:0,51,559	1/1:1,9:10:29.98:268,30,0	1/1:1,20:21:62.69:504,63,0	1/1:0,4:4:8.96:70,9,0	1/1:0,4:4:8.99:76,9,0	1/1:2,14:16:47.83:385,48,0	1/1:1,6:7:9.45:74,9,0	0/0:21,0:21:63.16:0,63,746	1/1:1,9:10:29.99:263,30,0	1/1:1,8:9:26.90:220,27,0	1/1:0,5:5:14.95:122,15,0
chr10	41745261	.	AAAAC	A	5643.18	PASS	AB=0.550;AC=39;AF=0.696;AN=56;BaseQRankSum=12.466;DP=334;FS=54.694;HRun=0;HaplotypeScore=130.3369;InbreedingCoeff=0.8447;MQ=60.70;MQ0=2;MQRankSum=-13.013;QD=27.80;ReadPosRankSum=2.139;VQSLOD=2.3114;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:21:44.02:747,44,0	0/0:5,0:5:15.05:0,15,436	0/0:16,0:13:23.94:0,24,608	0/0:14,0:11:29.31:0,29,664	1/1:12,0:12:26.85:354,27,0	1/1:3,8:11:21.85:244,22,0	1/1:2,7:9:19.53:243,20,0	1/1:9,13:22:32.10:446,32,0	1/1:1,6:7:15:177,15,0	0/0:21,0:21:63.22:0,63,1791	0/0:18,0:17:48.16:0,48,1371	1/1:1,10:11:28.94:330,29,0	1/1:0,4:4:12.04:141,12,0	1/1:5,0:5:12:170,12,0	0/0:20,0:20:60.21:0,60,1617	1/1:6,0:6:15.01:249,15,0	1/1:2,3:5:6.86:102,7,0	0/0:17,0:17:51.09:0,51,1317	1/1:2,9:11:26.93:340,27,0	1/1:0,20:20:60:664,60,0	1/1:1,4:5:6.01:70,6,0	1/1:0,4:4:7.95:103,8,0	1/1:0,14:14:39.02:443,39,0	1/1:2,6:8:8.72:102,9,0	0/0:20,0:20:60.21:0,60,1698	0/1:2,9:11:15.37:304,0,15	1/1:2,8:10:22.50:267,22,0	1/1:2,5:7:13.51:148,14,0
chr10	41745262	.	AAAC	A	4961.52	PASS	AB=1.000;AC=39;AF=0.696;AN=56;BaseQRankSum=12.722;DP=334;FS=55.549;HRun=0;HaplotypeScore=127.3345;InbreedingCoeff=0.8500;MQ=60.73;MQ0=2;MQRankSum=-13.615;QD=24.56;ReadPosRankSum=2.376;VQSLOD=2.7657;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,16:21:48:457,48,0	0/0:5,0:5:15.05:0,15,366	0/0:14,0:13:22.29:0,22,542	0/0:14,0:11:27.46:0,27,568	1/1:2,10:12:26.83:229,27,0	1/1:11,0:11:21.84:234,22,0	1/1:9,0:9:19.52:231,20,0	1/1:22,0:22:33.38:451,33,0	1/1:6,0:6:15.04:168,15,0	0/0:21,0:21:63.22:0,63,1534	0/0:18,0:17:51.14:0,51,1179	1/1:11,0:11:28.95:314,29,0	1/1:4,0:4:12.03:134,12,0	1/1:1,4:5:12.02:132,12,0	0/0:20,0:20:60.21:0,60,1364	1/1:1,5:6:15.01:146,15,0	1/1:5,0:5:6.86:97,7,0	0/0:17,0:17:51.05:0,51,1108	1/1:11,0:11:29.78:339,30,0	1/1:20,0:20:59.99:636,60,0	1/1:5,0:5:6.01:67,6,0	1/1:4,0:4:11.97:118,12,0	1/1:14,0:14:39.02:423,39,0	1/1:8,0:8:8.34:97,8,0	0/0:21,0:21:63.15:0,63,1466	0/1:11,0:11:15.38:289,0,15	1/1:10,0:10:22.49:255,22,0	1/1:7,0:7:13.50:143,13,0
chr10	41745290	.	G	GAT	2764.81	PASS	AB=0.876;AC=12;AF=0.231;AN=52;BaseQRankSum=-8.748;DP=337;FS=12.301;HRun=0;HaplotypeScore=141.1928;InbreedingCoeff=0.4761;MQ=77.21;MQ0=7;MQRankSum=7.383;QD=17.50;ReadPosRankSum=1.715;VQSLOD=3.5610;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:15.02:0,15,164	0/0:5,0:5:12.04:0,12,151	0/1:27,0:18:14.09:42,0,14	0/1:35,2:22:6.92:7,0,71	0/0:10,0:10:13.57:0,14,155	0/0:7,0:7:18.05:0,18,208	0/0:7,0:7:12.04:0,12,151	0/0:36,0:36:44.08:0,44,638	0/0:4,0:4:9.02:0,9,105	1/1:2,12:14:39.13:648,39,0	0/1:6,7:12:7.77:418,0,8	0/0:8,0:8:15.04:0,15,179	0/0:4,0:4:9.03:0,9,113	0/0:5,0:5:3.01:0,3,38	1/1:8,8:16:33.10:521,33,0	0/0:4,0:4:6.02:0,6,76	0/0:3,0:3:6.02:0,6,76	1/1:3,10:13:30.10:499,30,0	0/0:9,0:9:15:0,15,189	0/0:19,0:19:24.05:0,24,287	./.	0/0:3,0:3:3.01:0,3,38	0/0:11,0:11:15.04:0,15,180	./.	1/1:9,13:22:48.16:769,48,0	0/1:11,1:12:26.54:27,0,222	0/0:11,0:11:19.02:0,19,230	0/0:7,0:7:18.03:0,18,189
chr10	41745302	.	TCA	T	441.49	PASS	AB=0.878;AC=7;AF=0.135;AN=52;BaseQRankSum=1.894;DP=328;FS=17.193;HRun=0;HaplotypeScore=138.7618;InbreedingCoeff=-0.1716;MQ=88.38;MQ0=6;MQRankSum=-2.056;QD=2.87;ReadPosRankSum=-3.649;VQSLOD=0.3764;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:15.04:0,15,231	0/0:4,0:4:12.04:0,12,244	0/1:32,0:23:12.53:17,0,13	0/1:54,0:28:27.19:27,0,183	0/1:8,0:8:6.91:7,0,216	0/0:7,0:7:18.06:0,18,293	0/0:5,0:5:12.04:0,12,210	0/1:20,12:32:99:392,0,729	0/0:4,0:4:9.03:0,9,147	0/0:14,0:14:42.13:0,42,539	0/0:15,0:14:42.14:0,42,592	0/0:7,0:7:15.05:0,15,261	0/0:4,0:4:9.03:0,9,157	0/0:2,1:3:3.01:0,3,57	0/0:12,0:14:39.01:0,39,490	0/0:3,0:3:6.02:0,6,115	0/1:3,1:4:24.51:25,0,106	0/0:16,0:16:48.16:0,48,653	0/0:6,1:6:18.05:0,18,295	0/0:14,1:15:24.08:0,24,433	./.	0/0:2,1:3:3.01:0,3,58	0/0:7,0:7:15.05:0,15,265	./.	0/0:23,0:24:60.11:0,60,798	0/1:8,3:11:81.18:81,0,301	0/1:9,1:10:15.85:16,0,290	0/0:7,0:7:18.05:0,18,237
chr10	41745312	.	A	ATATTATATATC	6495.42	PASS	AB=1.000;AC=33;AF=0.660;AN=50;BaseQRankSum=2.006;DP=334;FS=5.511;HRun=0;HaplotypeScore=168.8174;InbreedingCoeff=0.4513;MQ=93.22;MQ0=5;MQRankSum=-7.595;QD=27.18;ReadPosRankSum=-1.933;VQSLOD=3.5738;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:5,4:10:6.02:342,6,0	0/0:4,0:4:12.04:0,12,423	0/1:35,0:24:13.56:14,0,52	0/1:64,0:35:7.59:8,0,186	1/1:6,2:10:2.76:80,3,0	1/1:2,5:7:9:363,9,0	1/1:3,0:3:3.01:112,3,0	1/1:27,0:27:78.17:2296,78,0	1/1:3,1:4:3.01:171,3,0	0/0:16,0:16:48.15:0,48,1281	0/0:13,0:13:39.10:0,39,1146	1/1:3,2:6:5.95:189,6,0	0/1:4,0:4:0.12:42,0,0	0/1:2,0:2:0:0,0,0	0/0:14,0:14:33.10:0,33,1065	./.	1/1:4,0:4:3.01:87,3,0	0/0:18,0:18:51.08:0,51,1403	1/1:9,0:8:20.94:275,21,0	1/1:15,1:16:6.02:207,6,0	./.	1/1:3,0:3:3.01:35,3,0	1/1:5,2:8:2.77:171,3,0	./.	0/0:27,0:27:66.17:0,66,1808	0/1:10,0:10:75.78:570,0,76	1/1:6,3:11:23.98:851,24,0	1/1:2,4:6:12.04:685,12,0
chr10	41745315	.	TGA	T	746	PASS	AB=0.798;AC=11;AF=0.220;AN=50;BaseQRankSum=3.271;DP=331;FS=7.525;HRun=0;HaplotypeScore=141.9644;InbreedingCoeff=0.0293;MQ=92.74;MQ0=4;MQRankSum=-4.342;QD=5.61;ReadPosRankSum=-4.318;VQSLOD=1.3335;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:5,2:7:5.95:0,6,43	0/0:4,0:4:12.04:0,12,243	0/0:33,0:23:13.45:0,13,159	0/1:62,0:37:9.30:9,0,177	0/0:6,4:10:1.93:0,2,29	0/1:6,0:6:12.02:12,0,34	1/1:1,2:3:3.01:47,3,0	0/1:18,9:27:99:441,0,242	0/0:1,2:3:2.98:0,3,21	0/0:17,0:17:51.16:0,51,954	0/0:13,0:13:39.10:0,39,718	0/1:3,3:6:12.01:12,0,16	1/1:2,2:4:3.90:49,4,0	0/1:1,1:2:0:0,0,0	0/0:15,0:15:42.14:0,42,809	./.	0/0:2,2:4:5.99:0,6,59	0/0:19,0:19:54.10:0,54,960	0/1:6,2:7:98.57:136,0,99	0/0:11,4:15:5.98:0,6,76	./.	0/0:2,1:3:3.01:0,3,54	0/0:5,4:9:1.54:0,2,19	./.	0/0:28,0:28:72.24:0,72,1373	0/1:8,4:12:99:167,0,205	0/0:9,1:10:4.91:0,5,180	0/0:4,1:5:11.90:0,12,86
chr10	41745328	.	T	TG	241.38	PASS	AB=0.784;AC=4;AF=0.077;AN=52;BaseQRankSum=2.454;DP=318;FS=9.115;HRun=0;HaplotypeScore=132.5406;InbreedingCoeff=-0.0577;MQ=87.89;MQ0=4;MQRankSum=-3.026;QD=5.36;ReadPosRankSum=-2.732;VQSLOD=2.1205;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:3,1:4:8.76:0,9,96	0/0:4,0:4:12.04:0,12,168	0/0:28,1:22:15.60:0,16,185	0/0:68,0:36:28.98:0,29,301	0/0:8,1:9:6.01:0,6,53	0/0:7,0:7:5.89:0,6,77	0/1:1,2:3:35.83:39,0,36	0/1:20,7:27:99:256,0,539	0/0:2,0:2:5.75:0,6,54	0/0:16,0:16:45.15:0,45,630	0/0:13,0:13:36.12:0,36,503	0/0:3,1:4:3.01:0,3,42	0/0:4,0:4:3.56:0,4,14	0/0:2,0:2:0.02:0,0,0	0/0:15,0:15:42.14:0,42,587	0/0:2,0:2:2.68:0,3,12	0/0:3,1:4:9.03:0,9,126	0/0:18,0:18:51.13:0,51,691	0/1:4,1:4:34.94:35,0,92	0/0:12,2:14:6.02:0,6,84	./.	0/0:2,1:3:5.69:0,6,52	0/0:9,2:10:3.35:0,3,43	./.	0/0:29,0:29:75.22:0,75,1011	0/1:9,1:10:15.61:16,0,347	0/0:10,0:10:21.07:0,21,293	0/0:4,0:4:12.04:0,12,167
chr10	41745349	.	GAGAGGA	G	2736.78	PASS	AB=0.893;AC=20;AF=0.417;AN=48;BaseQRankSum=0.755;DP=319;FS=3.979;HRun=0;HaplotypeScore=118.2479;InbreedingCoeff=0.5076;MQ=80.76;MQ0=7;MQRankSum=-8.499;QD=18.62;ReadPosRankSum=-2.075;VQSLOD=2.6904;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:5:2.74:0,3,12	0/0:4,0:4:9.03:0,9,243	0/0:38,0:19:45.35:0,45,591	0/1:52,0:26:6.47:6,0,385	1/1:9,0:9:1.24:3,1,0	0/1:10,0:9:14.94:40,0,15	0/0:3,0:3:0.47:0,0,1	1/1:7,3:10:18.06:341,18,0	0/0:8,0:8:2.83:0,3,12	0/0:12,0:12:33.11:0,33,510	0/0:16,0:16:45.15:0,45,687	./.	1/1:6,0:6:1.25:3,1,0	1/1:4,0:4:0.47:1,0,0	0/0:15,0:15:41.73:0,42,650	0/1:4,0:4:0:0,0,0	1/1:3,0:3:3.01:38,3,0	0/0:20,0:20:57.17:0,57,826	1/1:1,7:8:19.94:321,20,0	1/1:1,15:16:42.14:957,42,0	./.	0/0:5,0:5:2.74:0,3,12	0/0:15,0:14:3.86:0,4,91	./.	0/0:26,0:26:59.02:0,59,1168	0/1:4,9:13:0.61:716,0,1	1/1:2,7:9:24.08:459,24,0	./.
chr10	41745353	.	GGA	G	1527.66	PASS	AB=0.954;AC=29;AF=0.604;AN=48;BaseQRankSum=3.817;DP=334;FS=1.249;HRun=0;HaplotypeScore=109.2358;InbreedingCoeff=0.5133;MQ=84.01;MQ0=8;MQRankSum=-7.958;QD=7.60;ReadPosRankSum=-3.423;VQSLOD=2.7315;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,0:4:2.04:6,2,0	0/0:3,0:3:9.03:0,9,144	0/0:44,0:21:48.90:0,49,565	0/1:58,2:30:11.87:12,0,301	1/1:8,1:9:3.90:45,4,0	1/1:9,1:9:8.77:118,9,0	0/0:3,0:3:0:0,0,0	1/1:10,2:12:20.97:240,21,0	1/1:6,1:8:2.08:6,2,0	0/0:12,0:12:34.17:0,34,240	0/0:18,0:18:43.61:0,44,295	./.	1/1:6,0:6:0.89:2,1,0	0/1:4,0:4:0.17:0,0,0	0/1:14,1:15:5.18:5,0,270	0/1:4,0:4:0.22:0,0,0	1/1:3,0:3:3.01:38,3,0	0/0:22,0:22:52.71:0,53,344	1/1:7,1:8:20.32:273,20,0	1/1:15,1:16:42.05:418,42,0	./.	1/1:4,0:5:2.99:24,3,0	1/1:13,1:13:4.31:12,4,0	./.	0/0:26,0:26:51.13:0,51,477	0/1:11,2:13:0.96:251,0,1	1/1:7,2:9:23.96:230,24,0	./.
chr10	41745355	.	AAG	A	2837.20	PASS	AB=1.000;AC=27;AF=0.563;AN=48;BaseQRankSum=-2.645;DP=345;FS=5.304;HRun=0;HaplotypeScore=107.5990;InbreedingCoeff=0.5411;MQ=82.82;MQ0=9;MQRankSum=-3.224;QD=16.31;ReadPosRankSum=6.487;VQSLOD=2.8992;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,0:4:2.04:6,2,0	0/0:3,0:3:6.02:0,6,96	0/0:45,0:21:36.71:0,37,390	0/0:62,0:30:18.43:0,18,194	0/0:10,0:10:0.07:0,0,1	0/0:12,0:11:2.20:0,2,5	0/0:3,0:3:0:0,0,0	0/1:14,0:14:19.87:20,0,45	1/1:7,0:8:2.08:6,2,0	1/1:2,10:12:33.10:400,33,0	1/1:2,16:18:42.13:510,42,0	./.	1/1:6,0:6:0.89:2,1,0	0/1:6,0:6:0.17:0,0,0	1/1:4,11:15:33.02:358,33,0	0/1:4,0:4:0.22:0,0,0	1/1:3,0:3:0.47:1,0,0	1/1:3,18:21:48.15:582,48,0	0/0:11,0:11:0.46:0,0,115	1/1:16,0:16:36.89:146,37,0	./.	0/0:5,0:6:2.74:0,3,12	0/0:14,0:13:4.24:0,4,82	./.	1/1:5,21:26:62.67:763,63,0	1/1:12,0:12:27.47:119,27,0	1/1:9,0:9:15.62:64,16,0	./.
chr10	41745448	.	TCAGTGTAGAGGAGGTATTC	T	22786.39	PASS	AB=0.548;AC=35;AF=0.673;AN=52;BaseQRankSum=13.422;DP=332;FS=105.250;HRun=0;HaplotypeScore=181.0048;InbreedingCoeff=0.8659;MQ=87.21;MQ0=0;MQRankSum=-13.043;QD=107.48;ReadPosRankSum=2.223;VQSLOD=1.3960;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,9:13:12.04:553,12,0	0/0:7,0:7:21.07:0,21,1740	0/0:16,0:16:45.15:0,45,3178	0/0:18,0:18:48.16:0,48,3109	1/1:2,13:15:36.12:1723,36,0	1/1:2,8:10:15.05:822,15,0	1/1:2,6:8:12.04:603,12,0	1/1:3,7:10:18.05:724,18,0	1/1:4,8:12:21.07:1153,21,0	0/0:17,0:17:51.18:0,51,4423	0/0:18,0:18:54.19:0,54,4709	1/1:0,11:11:30.10:1646,30,0	1/1:1,14:15:33.11:1809,33,0	1/1:2,13:15:30.10:1646,30,0	0/0:13,0:13:39.13:0,39,3533	1/1:1,11:12:30.10:1646,30,0	./.	0/0:12,0:12:30.10:0,30,2699	1/1:2,11:13:27.09:1266,27,0	1/1:1,17:18:48.16:2590,48,0	1/1:3,3:6:3.90:167,4,0	1/1:1,8:9:21.07:1093,21,0	1/1:2,6:8:18.06:950,18,0	1/1:1,5:6:12.04:654,12,0	0/0:17,0:17:51.18:0,51,4647	0/1:3,14:17:99:2096,0,234	1/1:2,12:14:30.10:1646,30,0	./.
chr10	41747264	.	CTT	C	5939.20	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=3.801;DP=594;FS=5.841;HRun=2;HaplotypeScore=82.7955;InbreedingCoeff=0.9939;MQ=64.08;MQ0=1;MQRankSum=-1.190;QD=43.35;ReadPosRankSum=4.358;VQSLOD=4.7665;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,102,2072	0/0:10,0:10:30.10:0,30,600	0/0:20,0:19:57.15:0,57,1025	0/0:31,0:31:87.30:0,87,1699	1/1:0,11:11:27.09:438,27,0	0/0:28,0:28:84.29:0,84,1706	0/0:12,0:12:36.12:0,36,706	0/0:34,0:34:99:0,102,1969	0/0:22,0:22:60.14:0,60,1175	1/1:0,17:17:48.02:724,48,0	1/1:0,17:17:45.15:732,45,0	0/0:27,0:27:81.25:0,81,1565	0/0:24,0:24:72.25:0,72,1449	1/1:0,23:23:63.22:1026,63,0	1/1:0,28:28:78.27:1266,78,0	0/0:20,0:20:60.16:0,60,1102	0/0:22,0:22:66.21:0,66,1291	1/1:0,19:19:48.16:776,48,0	0/0:21,0:21:63.21:0,63,1228	0/0:32,0:32:96.29:0,96,1859	0/0:29,0:29:87.30:0,87,1756	0/0:4,0:4:12.04:0,12,244	0/0:12,0:12:36.12:0,36,731	0/0:17,0:17:51.16:0,51,999	1/1:0,22:21:60.20:977,60,0	0/0:24,0:24:72.23:0,72,1396	0/0:25,0:25:75.26:0,75,1523	0/0:9,0:9:27.09:0,27,548
chr10	41747654	.	TACACAC	T	1881.81	PASS	AB=0.830;AC=26;AF=0.500;AN=52;BaseQRankSum=7.006;DP=305;FS=13.488;HRun=0;HaplotypeScore=96.9622;InbreedingCoeff=0.6357;MQ=56.95;MQ0=3;MQRankSum=-6.185;QD=16.80;ReadPosRankSum=4.295;VQSLOD=2.0420;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:13,2:16:57.62:111,0,58	0/0:1,0:2:3.01:0,3,43	0/0:22,0:6:12.04:0,12,234	0/0:18,0:7:6.02:0,6,117	0/0:11,0:13:7.74:0,8,196	1/1:13,1:14:27.09:487,27,0	1/1:4,0:4:2.99:23,3,0	0/0:50,0:49:99:0,123,3220	1/1:8,0:8:6.02:120,6,0	1/1:6,0:6:17.58:171,18,0	1/1:2,0:3:6.27:22,6,0	1/1:8,0:8:18.06:325,18,0	1/1:7,1:8:12.04:208,12,0	0/0:12,0:12:23.42:0,23,164	1/1:6,0:7:5.75:82,6,0	1/1:8,1:9:18.05:286,18,0	1/1:6,5:11:3.01:66,3,0	0/1:7,0:9:41.85:59,0,42	0/0:19,0:16:45.15:0,45,1115	0/0:12,0:12:24.08:0,24,743	0/0:8,0:8:15:0,15,304	./.	./.	1/1:6,0:6:6:104,6,0	1/1:2,0:3:1.55:4,2,0	0/0:17,0:17:45.15:0,45,1237	0/0:11,0:11:27.09:0,27,864	0/0:8,0:8:15.05:0,15,499
chr10	41747664	.	CACACACTA	C	2867.66	PASS	AB=0.969;AC=30;AF=0.577;AN=52;BaseQRankSum=7.414;DP=280;FS=27.361;HRun=0;HaplotypeScore=103.5653;InbreedingCoeff=0.3833;MQ=65.68;MQ0=3;MQRankSum=-6.540;QD=18.27;ReadPosRankSum=4.432;VQSLOD=0.8672;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:10,0:13:57.62:125,0,58	0/0:2,0:2:6.02:0,6,110	0/1:21,0:7:15.82:16,0,226	0/1:19,0:10:9.09:9,0,115	0/1:14,0:14:40.19:40,0,138	1/1:3,8:12:27.09:791,27,0	1/1:1,0:1:2.99:23,3,0	0/0:49,0:48:99:0,144,4103	1/1:1,3:4:9.03:208,9,0	1/1:7,0:7:20.86:215,21,0	1/1:4,0:4:6.27:22,6,0	1/1:0,6:7:18.06:520,18,0	1/1:3,3:6:12.04:317,12,0	0/1:11,0:11:45.28:94,0,45	1/1:5,0:5:4.65:50,5,0	1/1:3,0:7:18.05:342,18,0	1/1:11,0:12:3.01:67,3,0	0/1:7,0:7:32.32:32,0,43	0/0:21,0:18:54.18:0,54,1526	0/0:8,0:8:24.08:0,24,743	0/0:8,0:8:18.05:0,18,449	./.	./.	1/1:1,4:5:6:175,6,0	1/1:2,0:2:1.55:4,2,0	0/0:15,0:15:45.15:0,45,1552	0/0:10,0:10:27.09:0,27,994	0/0:9,0:9:15.05:0,15,596
chr10	41747666	.	CACACTA	C	2630.64	PASS	AB=1.000;AC=30;AF=0.600;AN=50;BaseQRankSum=8.280;DP=271;FS=29.797;HRun=0;HaplotypeScore=98.2423;InbreedingCoeff=0.5532;MQ=66.30;MQ0=3;MQRankSum=-6.738;QD=17.77;ReadPosRankSum=5.264;VQSLOD=1.1041;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:13,0:13:45.23:67,0,45	0/0:2,0:2:6.02:0,6,84	0/1:21,0:7:14.86:15,0,133	0/1:17,0:9:8.49:8,0,67	0/1:13,0:13:13:121,0,13	1/1:12,0:12:27.09:456,27,0	./.	0/0:50,0:49:99:0,147,2986	1/1:4,0:4:9.03:131,9,0	1/1:1,4:7:21.07:448,21,0	1/1:4,0:4:9.03:145,9,0	1/1:7,0:7:18.06:301,18,0	1/1:5,0:5:9.03:156,9,0	1/1:10,0:10:17.70:112,18,0	1/1:3,2:5:12.04:249,12,0	1/1:5,0:5:12.04:167,12,0	1/1:12,0:12:3:30,3,0	1/1:5,1:6:15.01:260,15,0	0/0:21,0:18:54.12:0,54,1128	0/0:8,0:8:24.05:0,24,504	0/0:7,0:7:15.05:0,15,315	./.	./.	1/1:5,0:5:5.87:98,6,0	1/1:2,0:2:3.01:52,3,0	0/0:15,0:15:45.15:0,45,1129	0/0:10,0:10:27.09:0,27,757	0/0:9,0:9:15.05:0,15,460
chr10	41747668	.	CACTATATA	C	1642.86	PASS	AB=0.932;AC=24;AF=0.480;AN=50;BaseQRankSum=7.167;DP=259;FS=20.443;HRun=0;HaplotypeScore=107.9820;InbreedingCoeff=0.5141;MQ=67.01;MQ0=3;MQRankSum=-6.860;QD=14.16;ReadPosRankSum=4.408;VQSLOD=0.1839;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:12,0:13:21.64:53,0,22	0/0:2,0:2:6.02:0,6,164	0/1:19,0:7:18.54:19,0,122	0/0:15,0:9:13.04:0,13,124	1/1:6,4:13:24.53:446,25,0	1/1:12,0:12:26.64:180,27,0	./.	0/0:47,0:46:99:0,119,3897	0/1:3,0:4:23.46:23,0,27	0/1:7,0:7:62.25:92,0,62	1/1:4,0:4:7.50:34,7,0	1/1:7,0:7:17.84:129,18,0	1/1:5,0:5:8.97:89,9,0	1/1:0,9:9:18.06:543,18,0	0/0:3,0:3:7.73:0,8,39	1/1:5,0:5:12.03:123,12,0	1/1:10,1:11:5.85:51,6,0	0/0:6,0:6:0.17:0,0,131	0/0:20,0:17:48.16:0,48,1561	0/0:6,0:6:18.06:0,18,323	0/0:8,0:8:15.05:0,15,480	./.	./.	1/1:5,0:5:5.65:41,6,0	1/1:2,0:2:0.89:2,1,0	0/0:15,0:15:42.62:0,43,1496	0/0:10,0:10:27.09:0,27,845	0/0:9,0:9:15.05:0,15,481
chr10	41747670	.	C	CTA	1715.31	PASS	AB=0.713;AC=8;AF=0.182;AN=44;BaseQRankSum=-8.477;DP=263;FS=29.360;HRun=0;HaplotypeScore=82.5373;InbreedingCoeff=0.0233;MQ=68.60;MQ0=4;MQRankSum=6.378;QD=14.54;ReadPosRankSum=-2.572;VQSLOD=1.2283;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:12:2.84:0,3,14	0/0:2,0:2:5.91:0,6,52	0/0:19,0:7:4.40:0,4,19	0/0:18,0:9:2.80:0,3,14	0/0:11,0:13:14.20:0,14,70	0/0:10,0:12:25.60:0,26,126	./.	0/1:28,19:49:31.30:735,0,31	0/0:4,0:4:4.56:0,5,19	0/0:6,0:7:19.92:0,20,99	0/0:2,0:3:0:0,0,0	0/0:7,0:7:17.04:0,17,84	0/0:5,0:5:8.52:0,9,42	0/0:9,0:9:17.04:0,17,84	0/0:3,0:3:5.68:0,6,28	0/0:5,0:5:11.36:0,11,56	./.	0/0:3,0:6:8.52:0,9,42	0/1:11,9:17:85.97:347,0,86	./.	0/1:2,6:8:23.37:131,0,23	./.	./.	0/1:4,0:4:1.03:1,0,14	./.	0/1:7,9:17:38.48:344,0,38	1/1:4,6:10:15.05:239,15,0	0/1:5,4:9:38.77:39,0,47
chr10	41747721	.	TCTGA	T	5569.23	PASS	AC=34;AF=0.630;AN=54;BaseQRankSum=9.236;DP=234;FS=68.043;HRun=0;HaplotypeScore=62.0348;InbreedingCoeff=0.8793;MQ=71.83;MQ0=0;MQRankSum=-7.950;QD=44.91;ReadPosRankSum=2.231;VQSLOD=2.2653;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,10:11:21.07:407,21,0	0/0:3,0:3:9.03:0,9,247	0/0:6,0:5:15.05:0,15,379	0/0:10,0:9:18.63:0,19,525	1/1:2,11:13:24.08:465,24,0	1/1:0,16:16:44.97:753,45,0	1/1:0,1:1:3.01:58,3,0	0/0:38,0:38:99:0,105,2740	1/1:0,6:6:18.06:349,18,0	1/1:0,8:8:24.08:458,24,0	1/1:0,3:3:6.02:116,6,0	1/1:1,4:5:12.04:232,12,0	1/1:2,5:7:18.06:349,18,0	1/1:2,4:6:17.89:196,18,0	1/1:0,6:6:15.05:290,15,0	1/1:2,4:6:15.02:249,15,0	1/1:1,16:17:42.10:775,42,0	1/1:2,8:10:21.07:407,21,0	0/0:15,0:15:42.14:0,42,1111	0/0:5,0:5:15.05:0,15,390	0/0:10,0:10:21.07:0,21,575	./.	1/1:0,4:4:12.04:232,12,0	1/1:0,1:1:3.01:58,3,0	1/1:0,4:4:9.03:174,9,0	0/0:11,0:11:33.11:0,33,883	0/0:7,0:7:17.93:0,18,463	0/0:4,0:4:9.03:0,9,246
chr10	41747833	.	AAT	A	2476.92	PASS	AC=14;AF=0.259;AN=54;BaseQRankSum=-1.462;DP=217;FS=4.778;HRun=0;HaplotypeScore=35.6097;InbreedingCoeff=0.7099;MQ=76.88;MQ0=2;MQRankSum=2.666;QD=27.22;ReadPosRankSum=-0.929;VQSLOD=3.7790;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:7:1.21:0,1,90	0/0:2,0:2:6.02:0,6,103	0/0:14,0:8:15.70:0,16,184	0/0:17,0:5:8.63:0,9,56	0/0:8,0:8:12.04:0,12,198	0/0:5,0:5:9.03:0,9,154	0/0:1,0:1:3.01:0,3,36	1/1:7,42:49:99:1560,123,0	0/0:4,0:4:12.04:0,12,203	0/0:3,0:3:6.02:0,6,103	0/0:5,0:5:15.05:0,15,251	0/0:4,0:4:12.04:0,12,192	0/0:4,0:4:12.04:0,12,200	0/0:4,0:4:9.03:0,9,154	0/0:7,0:7:21.05:0,21,320	0/0:4,0:4:12.04:0,12,203	0/0:17,0:17:39.13:0,39,642	0/0:10,0:10:30.10:0,30,514	1/1:3,13:16:39.12:495,39,0	1/1:0,3:3:6.02:79,6,0	1/1:0,1:1:3.01:39,3,0	0/0:1,0:1:3.01:0,3,51	0/0:2,0:2:6.02:0,6,100	./.	0/0:7,0:7:21.07:0,21,346	1/1:2,7:9:21.07:275,21,0	1/1:2,5:7:9.03:118,9,0	1/1:3,3:6:7.27:82,7,0
chr10	41748357	.	C	CT	5226.45	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-10.121;DP=640;FS=5.685;HRun=1;HaplotypeScore=64.5728;InbreedingCoeff=0.9934;MQ=93.02;MQ0=0;MQRankSum=0.846;QD=41.15;ReadPosRankSum=1.725;VQSLOD=5.4842;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:93.30:0,93,1207	0/0:7,0:7:21.07:0,21,273	0/0:33,0:33:91.84:0,92,1085	0/0:24,0:24:60.16:0,60,760	1/1:0,21:21:57.08:802,57,0	0/0:18,0:18:48.10:0,48,598	0/0:32,0:32:96.31:0,96,1245	0/0:27,0:27:72.22:0,72,913	0/0:21,0:21:60.19:0,60,779	1/1:1,16:17:48.15:694,48,0	1/1:0,9:9:27.09:405,27,0	0/0:27,0:27:75.23:0,75,948	0/0:26,0:26:72.19:0,72,913	1/1:0,22:22:57.19:854,57,0	1/1:0,17:17:51.17:764,51,0	0/0:17,0:16:42.14:0,42,545	0/0:42,0:42:99:0,120,1519	1/1:1,24:25:71.75:1079,72,0	0/0:13,0:13:39.10:0,39,478	0/0:32,0:32:90.29:0,90,1168	0/0:44,0:44:99:0,126,1636	0/0:15,0:15:45.14:0,45,573	0/0:14,0:14:39.13:0,39,506	0/0:31,0:31:93.30:0,93,1207	1/1:0,16:16:42.14:630,42,0	0/0:33,0:33:99:0,99,1273	0/0:21,0:21:60.17:0,60,749	0/0:4,0:4:12.04:0,12,156
chr10	41748538	.	AGC	A	2905.70	PASS	AB=1.000;AC=48;AF=0.889;AN=54;BaseQRankSum=-3.775;DP=375;FS=5.843;HRun=0;HaplotypeScore=57.9351;InbreedingCoeff=-0.1378;MQ=53.58;MQ0=45;MQRankSum=2.819;QD=7.83;ReadPosRankSum=-1.883;VQSLOD=1.8410;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,0:7:8.99:75,9,0	0/1:5,0:5:30.19:39,0,30	1/1:55,0:6:3.87:11,4,0	0/1:72,0:15:31.56:54,0,32	1/1:17,0:17:2.88:18,3,0	1/1:12,1:13:13.29:155,13,0	1/1:8,1:7:18:165,18,0	1/1:20,0:18:47.81:398,48,0	1/1:4,0:4:8.95:69,9,0	1/1:9,0:6:14.99:137,15,0	0/1:6,0:6:17.07:33,0,17	0/1:5,0:5:0.53:43,0,1	1/1:8,0:7:12.32:83,12,0	1/1:15,0:14:21.30:168,21,0	1/1:9,0:9:14.88:112,15,0	1/1:5,0:4:3.89:28,4,0	1/1:11,0:11:6.01:60,6,0	0/1:6,0:6:4.08:95,0,4	1/1:7,0:6:18.01:165,18,0	1/1:19,0:18:35.92:296,36,0	1/1:17,0:17:29.78:240,30,0	./.	1/1:7,0:6:2.94:18,3,0	1/1:7,2:9:11.39:65,11,0	1/1:6,0:6:14.95:123,15,0	1/1:14,0:14:9.36:169,9,0	1/1:7,0:7:14.78:124,15,0	0/1:8,0:6:19.54:79,0,20
chr10	41748555	.	G	GCT	1425.04	PASS	AB=1.000;AC=16;AF=0.296;AN=54;BaseQRankSum=2.148;DP=424;FS=0.607;HRun=0;HaplotypeScore=77.4736;InbreedingCoeff=0.7102;MQ=65.42;MQ0=39;MQRankSum=1.330;QD=7.16;ReadPosRankSum=0.811;VQSLOD=2.5806;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:18.04:0,18,251	0/0:7,0:7:21:0,21,278	0/1:63,0:12:7.71:8,0,253	0/1:78,0:19:33.40:33,0,280	0/0:16,0:16:0.17:0,0,26	1/1:15,0:15:29.82:410,30,0	1/1:9,0:7:10.58:248,11,0	0/0:21,0:20:52.47:0,52,733	1/1:4,0:4:9.03:143,9,0	0/0:8,0:7:21.07:0,21,324	0/0:8,0:8:18.04:0,18,224	1/1:5,1:7:18.06:277,18,0	1/1:5,0:5:11.74:123,12,0	0/0:17,0:16:2.26:0,2,61	0/0:7,0:7:21.07:0,21,302	0/0:7,0:6:12.04:0,12,185	0/0:14,0:14:12.04:0,12,161	0/0:6,0:6:18.06:0,18,257	0/0:12,0:12:33.09:0,33,490	0/0:23,0:22:63.17:0,63,882	0/0:21,0:21:45.04:0,45,665	./.	1/1:11,0:11:12.04:182,12,0	1/1:7,0:7:11.97:187,12,0	0/0:5,0:5:15.04:0,15,210	0/0:13,0:13:33.83:0,34,375	0/0:12,0:12:29.81:0,30,392	0/0:13,0:12:35.43:0,35,480
chr10	41748722	.	C	CT	5571.72	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=17.720;DP=586;FS=0.000;HRun=0;HaplotypeScore=111.8087;InbreedingCoeff=0.9996;MQ=85.51;MQ0=0;MQRankSum=-6.632;QD=32.02;ReadPosRankSum=2.561;VQSLOD=4.4830;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:63.15:0,63,842	0/0:9,0:9:27.09:0,27,377	0/0:25,0:25:71.81:0,72,941	0/0:20,0:20:54.16:0,54,731	0/0:16,0:16:48.16:0,48,669	1/1:2,23:25:75.20:850,75,0	1/1:3,14:17:45.12:537,45,0	0/0:32,0:32:93.29:0,93,1251	1/1:4,13:17:33.17:490,33,0	0/0:25,0:25:75.24:0,75,1020	0/0:13,0:13:39.13:0,39,545	1/1:4,21:25:69.19:815,69,0	1/1:1,25:26:78.20:884,78,0	0/0:36,0:36:99:0,105,1463	0/0:24,0:24:69.22:0,69,948	0/0:13,0:13:33.11:0,33,461	0/0:23,0:23:66.22:0,66,923	0/0:20,0:20:54.09:0,54,705	0/0:18,0:18:54.18:0,54,755	0/0:19,0:19:57.19:0,57,797	0/0:21,0:21:60.20:0,60,836	1/1:2,19:21:62.20:682,62,0	1/1:0,21:21:63.17:725,63,0	1/1:5,17:22:52.93:587,53,0	0/0:20,0:20:57.19:0,57,797	0/0:23,0:23:69.23:0,69,964	0/0:24,0:24:72.23:0,72,991	0/0:10,0:10:30.08:0,30,401
chr10	41748723	.	C	CT	5066.27	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=17.547;DP=597;FS=0.712;HRun=1;HaplotypeScore=116.0028;InbreedingCoeff=0.9996;MQ=84.45;MQ0=0;MQRankSum=-6.158;QD=27.84;ReadPosRankSum=2.169;VQSLOD=4.7694;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:60.13:0,60,757	0/0:9,0:9:27.09:0,27,350	0/0:24,0:24:67.09:0,67,846	0/0:20,0:20:57.16:0,57,709	0/0:16,0:16:45.15:0,45,584	1/1:4,23:27:75.13:771,75,0	1/1:4,14:18:45.97:475,46,0	0/0:35,0:35:90.26:0,90,1119	1/1:6,13:19:48.06:491,48,0	0/0:26,0:26:75.21:0,75,926	0/0:13,0:13:39.13:0,39,506	1/1:4,21:25:69.12:713,69,0	1/1:2,25:27:75.12:766,75,0	0/0:35,0:35:99:0,102,1322	0/0:23,0:23:66.21:0,66,855	0/0:14,0:14:36.11:0,36,454	0/0:23,0:23:69.21:0,69,880	0/0:20,0:20:57.06:0,57,677	0/0:18,0:18:54.17:0,54,688	0/0:19,0:19:57.19:0,57,740	0/0:22,0:22:60.18:0,60,764	1/1:3,19:22:63.11:643,63,0	1/1:0,21:21:62.85:632,63,0	1/1:6,17:23:54.10:576,54,0	0/0:20,0:20:60.17:0,60,762	0/0:24,0:24:69.22:0,69,895	0/0:23,0:23:69.22:0,69,895	0/0:10,0:10:27.09:0,27,350
chr10	41748923	.	G	GCATTA	14632.23	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-16.521;DP=712;FS=0.698;HRun=0;HaplotypeScore=134.1223;InbreedingCoeff=0.9995;MQ=88.56;MQ0=0;MQRankSum=-9.745;QD=76.61;ReadPosRankSum=3.703;VQSLOD=6.8682;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,102,2210	0/0:10,0:10:30.10:0,30,696	0/0:26,0:26:78.17:0,78,1601	0/0:28,0:28:78.08:0,78,1478	0/0:34,0:34:99:0,99,2208	1/1:0,16:19:39.13:1293,39,0	1/1:0,18:18:42.14:1309,42,0	0/0:36,0:36:99:0,105,2317	1/1:1,21:25:57.20:1894,57,0	0/0:27,0:27:78.24:0,78,1657	0/0:23,0:23:66.05:0,66,1342	1/1:0,22:26:54.19:1793,54,0	1/1:1,28:29:75.26:2408,75,0	0/0:30,0:30:90.31:0,90,2049	0/0:41,0:41:99:0,120,2631	0/0:17,0:17:51.13:0,51,1050	0/0:22,0:22:66.20:0,66,1488	0/0:13,0:13:36.08:0,36,787	0/0:31,0:31:90.30:0,90,2027	0/0:39,0:39:99:0,111,2277	0/0:21,0:21:60.21:0,60,1386	1/1:1,24:25:63.22:2044,63,0	1/1:0,26:28:63.22:2041,63,0	1/1:0,20:21:57.20:1850,57,0	0/0:18,0:18:51.18:0,51,1187	0/0:30,0:30:87.27:0,87,1892	0/0:33,0:33:93.26:0,93,1990	0/0:8,0:8:24.08:0,24,556
chr10	41750059	.	TAGATCGCTCCTGAGAGACACAGCC	T	2377.81	PASS	AC=12;AF=0.222;AN=54;BaseQRankSum=6.140;DP=558;FS=1.172;HRun=0;HaplotypeScore=201.6742;InbreedingCoeff=0.8131;MQ=42.37;MQ0=105;MQRankSum=-4.263;QD=37.15;ReadPosRankSum=0.200;VQSLOD=2.7129;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:29:72.25:0,72,6572	0/0:11,0:10:27.09:0,27,2500	0/0:36,0:9:12.02:0,12,653	0/0:34,0:4:12.04:0,12,517	1/1:7,4:7:6.02:393,6,0	0/0:31,0:27:66.23:0,66,6236	0/0:20,0:16:39.13:0,39,2972	0/0:34,0:13:30.10:0,30,2383	0/0:20,0:14:39.13:0,39,3540	1/1:7,7:9:12.04:634,12,0	1/1:2,8:6:15.05:983,15,0	0/0:21,0:16:48.16:0,48,4337	0/0:26,0:22:48.15:0,48,4344	./.	1/1:8,9:4:3.01:197,3,0	0/0:20,0:16:45.15:0,45,3749	0/0:20,0:17:39.13:0,39,3463	1/1:2,3:3:3.01:197,3,0	0/0:23,0:12:33.11:0,33,2434	0/0:10,0:9:18.06:0,18,2012	0/0:28,0:13:36.12:0,36,2441	0/0:14,0:12:30.10:0,30,2643	0/0:13,0:11:18.06:0,18,1148	0/0:22,0:16:30.10:0,30,3102	1/1:4,3:6:3.01:128,3,0	0/0:17,0:13:39.13:0,39,3426	0/0:34,0:24:60.21:0,60,5700	0/0:7,0:5:6.02:0,6,564
chr10	41750415	.	A	AG	671.61	PASS	AC=12;AF=0.300;AN=40;BaseQRankSum=-5.278;DP=133;FS=21.894;HRun=7;HaplotypeScore=26.4764;InbreedingCoeff=0.6742;MQ=33.55;MQ0=24;MQRankSum=-3.092;QD=15.62;ReadPosRankSum=0.749;VQSLOD=1.6336;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,5:7:18.03:204,18,0	0/0:1,0:1:3:0,3,29	./.	./.	0/0:3,0:2:3:0,3,25	0/0:3,0:2:6:0,6,54	0/0:2,0:2:3:0,3,29	1/1:3,4:6:9.03:108,9,0	./.	0/0:9,0:7:21.03:0,21,202	0/0:4,0:4:9.01:0,9,87	./.	0/0:3,0:2:6.01:0,6,58	0/0:2,0:2:6.01:0,6,58	0/0:9,0:6:9.01:0,9,87	./.	0/0:8,0:8:21.03:0,21,201	0/0:11,0:11:23.98:0,24,218	1/1:6,4:4:9.03:109,9,0	./.	./.	./.	0/0:4,0:3:3:0,3,28	0/0:4,0:4:4.72:0,5,21	0/0:13,0:12:27.04:0,27,260	1/1:2,5:6:12.04:145,12,0	1/1:1,7:7:15.05:181,15,0	1/1:0,3:3:6.02:72,6,0
chr10	41750492	.	GA	G	1241	PASS	AB=0.828;AC=14;AF=0.250;AN=56;BaseQRankSum=-2.298;DP=326;FS=3.795;HRun=9;HaplotypeScore=45.2111;InbreedingCoeff=0.7674;MQ=63.37;MQ0=11;MQRankSum=2.684;QD=11.93;ReadPosRankSum=1.612;VQSLOD=2.4970;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:44.79:0,45,485	0/0:9,0:9:27.05:0,27,298	0/1:25,0:8:6.91:7,0,32	0/0:24,0:8:12.64:0,13,131	0/0:16,0:16:48.11:0,48,533	0/0:11,0:11:33.10:0,33,380	0/0:5,0:5:15.04:0,15,172	0/1:9,10:18:4.63:212,0,5	0/0:2,0:2:6.02:0,6,69	0/0:18,0:18:48.12:0,48,538	0/0:19,0:18:45.09:0,45,504	0/0:3,0:3:9.03:0,9,104	0/0:6,0:6:18.05:0,18,208	0/0:4,0:4:12.04:0,12,138	0/0:5,0:5:15.04:0,15,173	0/0:7,0:7:21.06:0,21,242	0/0:19,0:19:48.10:0,48,530	0/0:24,0:23:57.15:0,57,647	1/1:3,6:7:15.01:137,15,0	1/1:1,11:11:24.01:220,24,0	1/1:1,4:4:12.01:110,12,0	0/0:1,0:1:3.01:0,3,31	0/0:7,0:7:21.06:0,21,242	0/0:8,0:8:21.06:0,21,242	0/0:15,0:14:36.11:0,36,415	1/1:2,13:15:36.02:330,36,0	1/1:2,9:11:24.01:220,24,0	1/1:0,8:8:21.01:192,21,0
chr10	41750509	.	T	TA	426.76	PASS	AB=0.972;AC=3;AF=0.054;AN=56;BaseQRankSum=-3.583;DP=392;FS=5.245;HRun=7;HaplotypeScore=57.4713;InbreedingCoeff=0.4765;MQ=67.47;MQ0=7;MQRankSum=-0.423;QD=8.71;ReadPosRankSum=-0.340;VQSLOD=0.6410;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:42.05:0,42,405	0/0:12,0:12:36.06:0,36,348	0/0:33,0:12:3.35:0,3,149	0/1:34,1:14:25.01:25,0,89	0/0:18,0:18:48.07:0,48,463	0/0:10,0:10:27.04:0,27,261	0/0:5,0:5:9.01:0,9,87	0/0:18,0:17:45.07:0,45,434	0/0:3,0:3:6.01:0,6,58	0/0:22,0:22:60.08:0,60,575	0/0:21,0:20:54:0,54,521	0/0:5,0:5:15.02:0,15,145	0/0:12,0:12:36.03:0,36,337	0/0:9,0:9:24.03:0,24,232	0/0:8,0:8:21.02:0,21,197	0/0:11,0:11:33.05:0,33,317	1/1:0,14:14:42.13:507,42,0	0/0:27,0:26:57.09:0,57,550	0/0:11,0:10:27.04:0,27,257	0/0:14,0:14:42.06:0,42,400	0/0:6,0:6:18.03:0,18,174	0/0:2,0:2:6.01:0,6,58	0/0:8,0:8:21.02:0,21,197	0/0:12,0:12:33.05:0,33,318	0/0:16,0:16:45.05:0,45,428	0/0:17,0:17:48.08:0,48,464	0/0:13,0:13:39.06:0,39,377	0/0:9,0:9:27.04:0,27,261
chr10	41750545	.	GA	G	1038.41	PASS	AB=0.900;AC=5;AF=0.089;AN=56;BaseQRankSum=3.302;DP=462;FS=10.667;HRun=8;HaplotypeScore=60.7281;InbreedingCoeff=0.7693;MQ=71.41;MQ0=0;MQRankSum=-0.150;QD=17.02;ReadPosRankSum=1.460;VQSLOD=2.6440;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,27:28:75.12:723,75,0	0/0:12,0:12:36.11:0,36,435	0/0:17,0:15:33.03:0,33,376	0/0:12,0:8:8.80:0,9,106	0/0:23,0:23:66.19:0,66,786	0/0:9,0:9:21.06:0,21,254	0/0:7,0:7:18.06:0,18,217	0/0:28,0:28:75.22:0,75,897	0/0:10,0:10:30.09:0,30,362	0/0:22,0:22:60.18:0,60,719	0/0:19,0:19:54.16:0,54,649	0/0:13,0:13:39.12:0,39,471	0/0:12,0:12:33.10:0,33,393	0/0:15,1:16:19.13:0,19,498	0/0:14,0:14:39.12:0,39,471	1/1:0,15:15:45.07:435,45,0	0/0:22,0:22:57.15:0,57,674	0/0:20,0:20:54.17:0,54,652	0/0:23,0:23:60.17:0,60,707	0/0:19,0:19:54.17:0,54,652	0/0:12,0:12:33.09:0,33,388	0/0:5,0:5:15.05:0,15,181	0/0:14,0:14:42.13:0,42,507	0/0:16,1:17:17.40:0,17,448	0/1:16,2:18:6.86:7,0,463	0/0:28,0:28:75.23:0,75,906	0/0:19,0:19:57.16:0,57,677	0/0:8,0:8:15.05:0,15,181
chr10	41752035	.	C	CA	1618.77	PASS	AB=0.780;AC=27;AF=0.482;AN=56;BaseQRankSum=-4.272;DP=475;FS=3.733;HRun=16;HaplotypeScore=74.0296;InbreedingCoeff=0.4154;MQ=73.65;MQ0=2;MQRankSum=1.521;QD=6.20;ReadPosRankSum=-3.435;VQSLOD=1.8711;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:21:24.21:0,24,68	0/1:5,1:6:10.77:18,0,11	0/0:20,0:12:5.04:0,5,27	0/0:16,0:14:0.82:0,1,12	0/0:10,0:26:25.55:0,26,72	0/1:13,14:27:31.12:156,0,31	0/1:9,1:10:12.63:90,0,13	1/1:14,1:23:20.09:188,20,0	1/1:18,1:20:27.63:272,28,0	0/0:21,1:25:23.04:0,23,117	0/0:21,1:25:6.14:0,6,112	1/1:2,5:7:2.99:24,3,0	1/1:10,1:11:3.76:96,4,0	0/0:7,0:17:14.65:0,15,41	0/0:20,0:20:25.70:0,26,149	0/0:3,0:15:20.30:0,20,57	0/0:4,0:18:26.45:0,26,74	0/0:7,0:10:17.61:0,18,84	0/1:7,2:10:4.86:42,0,5	1/1:27,3:35:51.76:338,52,0	0/1:2,2:9:21.64:26,0,22	1/1:6,4:11:5.22:66,5,0	0/1:8,6:14:46.09:51,0,46	1/1:2,8:10:14.95:115,15,0	0/1:16,0:17:0.10:0,0,83	1/1:18,3:21:10.92:93,11,0	1/1:20,1:22:19.23:190,19,0	1/1:0,0:4:8.52:42,9,0
chr10	41755293	.	ATT	A	12479.94	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-0.412;DP=471;FS=0.900;HRun=9;HaplotypeScore=71.6466;InbreedingCoeff=0.9681;MQ=71.40;MQ0=1;MQRankSum=-5.735;QD=27.92;ReadPosRankSum=2.724;VQSLOD=4.9863;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,21:22:51.08:594,51,0	0/0:6,0:7:18.06:0,18,275	0/0:9,0:9:14.67:0,15,175	0/0:8,0:8:20.28:0,20,296	1/1:3,25:28:63.16:734,63,0	1/1:1,17:18:36.11:420,36,0	1/1:1,9:10:18.05:210,18,0	1/1:5,26:31:78.13:851,78,0	1/1:0,7:7:18.05:210,18,0	1/1:2,21:23:63.16:722,63,0	1/1:3,25:28:63.16:734,63,0	1/1:1,8:9:18.05:210,18,0	1/1:1,15:16:39.11:454,39,0	1/1:1,12:13:30.09:350,30,0	1/1:1,15:16:42.12:489,42,0	1/1:1,10:11:24.07:280,24,0	1/1:0,17:17:42.12:489,42,0	1/1:1,12:12:27.08:314,27,0	1/1:0,14:14:42.12:489,42,0	1/1:3,23:26:60.15:699,60,0	1/1:0,5:5:15.04:175,15,0	1/1:1,13:14:39.11:454,39,0	1/1:1,23:24:54.16:629,54,0	1/1:0,6:6:15.04:175,15,0	1/1:1,20:21:57.17:664,57,0	1/1:1,19:20:54.14:620,54,0	1/1:5,34:39:93.27:1084,93,0	1/1:3,12:16:38.85:431,39,0
chr10	41756436	.	TG	T	6871.67	PASS	AB=0.918;AC=40;AF=0.714;AN=56;BaseQRankSum=8.882;DP=567;FS=12.751;HRun=10;HaplotypeScore=87.9899;InbreedingCoeff=0.6272;MQ=83.26;MQ0=0;MQRankSum=-2.562;QD=15.41;ReadPosRankSum=6.272;VQSLOD=3.7797;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,0:18:22.40:66,22,0	0/1:7,1:8:1.69:2,0,88	0/1:19,1:20:4.87:5,0,232	0/1:20,2:21:59.29:59,0,129	1/1:5,19:24:59.98:520,60,0	1/1:3,16:19:38.99:339,39,0	1/1:1,13:14:29.99:260,30,0	0/0:19,1:21:0.93:0,1,214	1/1:1,18:19:44.97:391,45,0	1/1:4,24:28:68.98:599,69,0	1/1:2,26:28:71.87:615,72,0	1/1:0,20:20:56.98:495,57,0	1/1:4,17:21:50.99:442,51,0	1/1:5,19:24:44.26:386,44,0	1/1:1,17:18:50.99:443,51,0	1/1:0,1:18:31.52:110,32,0	1/1:3,0:24:38.70:114,39,0	1/1:2,4:7:14.03:110,14,0	0/1:19,2:21:10.02:10,0,335	0/0:24,2:26:2:0,2,453	0/0:22,1:23:27.90:0,28,502	1/1:5,27:32:74.98:651,75,0	1/1:1,11:13:28.98:240,29,0	1/1:4,24:28:59.97:521,60,0	1/1:1,19:20:56.99:495,57,0	0/0:22,2:24:9.92:0,10,314	0/0:14,0:14:27.06:0,27,290	0/0:13,0:13:30.03:0,30,309
chr10	41757499	.	TTCTC	T	1772.87	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=12.564;DP=615;FS=3.624;HRun=0;HaplotypeScore=184.2755;InbreedingCoeff=0.9568;MQ=87.34;MQ0=0;MQRankSum=-11.820;QD=14.30;ReadPosRankSum=1.978;VQSLOD=3.4636;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,102,2593	0/0:9,0:9:24:0,24,658	0/0:23,0:23:66.20:0,66,1671	0/0:26,0:26:64.73:0,65,1420	0/0:35,0:35:99:0,99,2619	1/1:8,12:20:42.10:452,42,0	1/1:9,2:11:11.67:98,12,0	0/0:31,0:31:93.31:0,93,2422	1/1:5,7:11:21.05:229,21,0	0/0:28,0:28:84.29:0,84,2248	0/0:24,0:24:72.23:0,72,1911	1/1:9,6:14:23.98:229,24,0	1/1:8,6:14:21.05:220,21,0	0/0:22,0:22:66.23:0,66,1825	0/0:20,0:20:60.21:0,60,1539	0/0:29,0:29:84.29:0,84,2277	0/0:27,0:27:78.24:0,78,2077	0/0:16,0:16:48.16:0,48,1294	0/0:18,0:18:51.18:0,51,1366	0/0:35,0:35:99:0,99,2697	0/0:20,0:20:60.21:0,60,1679	1/1:15,17:32:51.07:495,51,0	1/1:10,8:18:26.99:243,27,0	1/1:1,1:2:1.55:4,2,0	0/0:25,0:25:75.26:0,75,2065	0/0:34,0:34:99:0,102,2845	0/0:29,0:29:87.30:0,87,2376	0/0:5,0:5:12.04:0,12,298
chr10	41757505	.	A	AAG	657.05	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=12.465;DP=552;FS=2.356;HRun=0;HaplotypeScore=155.8936;InbreedingCoeff=0.9409;MQ=90.88;MQ0=0;MQRankSum=-12.138;QD=10.77;ReadPosRankSum=3.934;VQSLOD=3.5593;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:99:0,99,1542	0/0:8,0:8:24.08:0,24,391	0/0:24,0:24:72.19:0,72,1113	0/0:22,0:22:65.76:0,66,872	0/0:33,0:33:99:0,99,1590	1/1:0,12:12:34.97:206,35,0	1/1:1,2:4:8.07:41,8,0	0/0:34,0:34:99:0,102,1532	1/1:0,7:7:19.26:107,19,0	0/0:28,0:28:84.28:0,84,1349	0/0:23,0:23:69.22:0,69,1097	1/1:0,6:6:17.13:90,17,0	1/1:1,6:7:15.34:91,15,0	0/0:23,0:23:69.24:0,69,1125	0/0:17,0:17:51.15:0,51,781	0/0:27,0:27:81.26:0,81,1297	0/0:28,0:28:81.24:0,81,1265	0/0:17,0:17:48.11:0,48,752	0/0:21,0:21:63.20:0,63,1001	0/0:34,0:34:93.32:0,93,1517	0/0:22,0:22:66.18:0,66,1023	1/1:0,17:17:47.28:218,47,0	1/1:0,8:8:21.71:96,22,0	0/0:0,1:1:0.89:0,1,2	0/0:26,0:26:78.24:0,78,1224	0/0:36,0:36:99:0,105,1712	0/0:31,0:31:90.26:0,90,1392	0/0:3,0:3:9.03:0,9,147
chr10	41757511	.	T	TTG	1790.32	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=12.550;DP=567;FS=3.826;HRun=0;HaplotypeScore=157.4450;InbreedingCoeff=0.9500;MQ=91.33;MQ0=0;MQRankSum=-12.402;QD=29.35;ReadPosRankSum=6.353;VQSLOD=5.1085;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:96.31:0,96,1527	0/0:9,0:9:27.09:0,27,440	0/0:25,0:25:75.18:0,75,1099	0/0:23,0:23:57.19:0,57,891	0/0:34,0:34:99:0,99,1606	1/1:0,12:12:36.11:426,36,0	1/1:0,3:3:9.01:94,9,0	0/0:33,0:33:99:0,99,1615	1/1:0,7:7:21.06:239,21,0	0/0:30,0:30:90.31:0,90,1464	0/0:23,0:23:69.22:0,69,1102	1/1:0,6:6:18.05:204,18,0	1/1:1,6:7:20.99:221,21,0	0/0:24,0:24:72.25:0,72,1167	0/0:15,0:15:45.15:0,45,734	0/0:27,0:27:81.28:0,81,1317	0/0:29,0:29:84.29:0,84,1366	0/0:17,0:17:48.14:0,48,757	0/0:23,0:23:63.21:0,63,1006	0/0:35,0:35:99:0,102,1634	0/0:22,0:22:66.23:0,66,1071	1/1:1,17:18:51.12:547,51,0	1/1:0,8:8:24.05:253,24,0	0/0:0,1:1:0.89:0,1,2	0/0:26,0:26:75.26:0,75,1222	0/0:36,0:36:99:0,105,1659	0/0:35,0:35:99:0,105,1646	0/0:4,0:4:12.04:0,12,196
chr10	41757520	.	A	AAACATTTG	7048.88	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=12.747;DP=558;FS=5.505;HRun=0;HaplotypeScore=206.1604;InbreedingCoeff=0.9521;MQ=88.92;MQ0=1;MQRankSum=-12.293;QD=103.66;ReadPosRankSum=6.460;VQSLOD=4.7809;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:78.27:0,78,2339	0/0:11,0:11:33.10:0,33,924	0/0:21,0:21:63.19:0,63,1737	0/0:23,0:23:69.13:0,69,1645	0/0:31,0:31:93.32:0,93,2767	1/1:1,12:13:39.13:1485,39,0	1/1:1,3:4:9.03:316,9,0	0/0:33,0:33:93.31:0,93,2668	1/1:3,6:7:21.07:795,21,0	0/0:30,0:30:90.30:0,90,2575	0/0:27,0:27:81.23:0,81,2308	1/1:1,6:6:18.06:698,18,0	1/1:2,6:8:21.07:820,21,0	0/0:23,0:23:69.22:0,69,1943	0/0:16,0:16:45.15:0,45,1343	0/0:26,0:26:78.25:0,78,2218	0/0:30,0:30:87.30:0,87,2572	0/0:16,0:16:45.13:0,45,1266	0/0:22,0:22:66.23:0,66,1916	0/0:35,0:35:99:0,102,2832	0/0:20,0:20:60.21:0,60,1681	1/1:1,16:18:51.18:1973,51,0	1/1:0,8:8:24.08:918,24,0	1/1:1,0:1:3.01:44,3,0	0/0:28,0:28:81.28:0,81,2386	0/0:30,0:30:90.30:0,90,2627	0/0:35,0:35:99:0,105,2992	0/0:4,0:4:12.04:0,12,363
chr10	41757522	.	AT	A	1007.70	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=12.436;DP=554;FS=3.787;HRun=1;HaplotypeScore=149.6052;InbreedingCoeff=0.9490;MQ=89.09;MQ0=1;MQRankSum=-12.163;QD=14.82;ReadPosRankSum=3.578;VQSLOD=3.8423;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:78.27:0,78,1246	0/0:11,0:11:33.11:0,33,528	0/0:22,0:22:66.22:0,66,1026	0/0:22,0:22:64.77:0,65,990	0/0:31,0:31:93.32:0,93,1483	1/1:1,12:13:38.43:260,38,0	1/1:1,3:4:8.60:50,9,0	0/0:35,0:35:99:0,105,1661	1/1:2,7:7:19.74:121,20,0	0/0:30,0:30:87.28:0,87,1348	0/0:27,0:27:81.28:0,81,1295	1/1:1,6:6:17.79:119,18,0	1/1:3,6:9:23.80:168,24,0	0/0:22,0:22:66.22:0,66,1049	0/0:16,0:16:48.16:0,48,767	0/0:26,0:26:78.25:0,78,1213	0/0:30,0:30:87.28:0,87,1368	0/0:16,0:16:45.15:0,45,712	0/0:21,0:21:63.19:0,63,979	0/0:32,0:32:93.30:0,93,1461	0/0:20,0:20:60.16:0,60,908	1/1:1,17:18:50.38:335,50,0	1/1:0,8:8:23.41:148,23,0	0/0:1,0:1:0.89:0,1,2	0/0:28,0:28:84.29:0,84,1339	0/0:29,0:29:87.30:0,87,1387	0/0:34,0:34:99:0,102,1601	0/0:4,0:4:12.04:0,12,192
chr10	41761675	.	A	AG	1680.63	PASS	AC=36;AF=0.900;AN=40;BaseQRankSum=-1.592;DP=101;FS=0.000;HRun=5;HaplotypeScore=12.1614;InbreedingCoeff=0.2686;MQ=22.20;MQ0=35;MQRankSum=1.390;QD=25.46;ReadPosRankSum=0.682;VQSLOD=1.1482;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	0/0:1,0:1:3.01:0,3,32	./.	./.	./.	1/1:0,1:1:3.01:39,3,0	1/1:2,1:2:3.90:41,4,0	1/1:3,5:6:15.05:197,15,0	0/0:0,0:1:2.60:0,3,10	1/1:0,1:1:3.01:39,3,0	1/1:0,1:1:3.01:39,3,0	1/1:1,2:2:6.02:74,6,0	1/1:1,2:2:6.02:79,6,0	1/1:2,3:5:12.04:154,12,0	1/1:0,5:5:15.05:197,15,0	./.	1/1:1,3:3:9.03:118,9,0	./.	1/1:2,5:6:15.05:196,15,0	1/1:1,1:2:3.01:39,3,0	1/1:1,3:3:8.99:99,9,0	./.	./.	1/1:2,1:1:3.01:39,3,0	1/1:1,3:3:9.03:113,9,0	1/1:0,4:4:12.04:158,12,0	1/1:2,3:3:9.03:118,9,0	1/1:0,3:3:3.01:35,3,0
chr10	41761975	.	GA	G	4993.25	PASS	AB=1.000;AC=31;AF=0.554;AN=56;BaseQRankSum=3.952;DP=352;FS=0.000;HRun=7;HaplotypeScore=58.0745;InbreedingCoeff=0.8790;MQ=72.50;MQ0=0;MQRankSum=-4.586;QD=25.35;ReadPosRankSum=-1.856;VQSLOD=4.4246;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:5:12.04:0,12,151	0/0:4,0:4:12.04:0,12,151	0/0:8,0:7:18.05:0,18,212	0/1:11,0:8:10.72:11,0,37	0/0:17,0:17:42.13:0,42,528	1/1:0,14:14:39.09:398,39,0	1/1:1,11:12:33.07:336,33,0	1/1:5,20:25:60.12:606,60,0	1/1:0,11:11:30.07:306,30,0	0/0:15,0:15:42.13:0,42,518	0/0:15,0:15:36.12:0,36,453	1/1:2,12:14:36.08:367,36,0	1/1:1,15:16:48.09:482,48,0	0/0:13,0:13:36.12:0,36,453	0/0:16,0:16:33.11:0,33,413	0/0:17,0:17:30.10:0,30,377	0/0:19,0:19:51.16:0,51,642	0/0:19,0:19:48.14:0,48,590	1/1:3,17:20:51.12:520,51,0	1/1:0,11:11:30.06:306,30,0	1/1:0,2:2:6.01:61,6,0	1/1:0,3:3:9.02:92,9,0	1/1:3,8:11:27:268,27,0	1/1:0,7:7:21.05:214,21,0	0/0:7,0:7:18.02:0,18,209	1/1:6,14:20:10.35:416,10,0	1/1:1,17:18:54.12:551,54,0	1/1:0,2:2:6.01:61,6,0
chr10	41762019	.	C	CA	10809.24	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-2.131;DP=370;FS=9.116;HRun=1;HaplotypeScore=55.0714;InbreedingCoeff=0.9337;MQ=82.61;MQ0=0;MQRankSum=-5.390;QD=32.46;ReadPosRankSum=3.544;VQSLOD=3.6387;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,0:6:11.99:101,12,0	0/0:7,0:7:21.07:0,21,270	0/0:17,0:18:26.19:0,26,396	0/0:10,0:12:21.92:0,22,276	1/1:0,19:19:54.06:731,54,0	1/1:20,0:20:36.21:399,36,0	1/1:12,0:12:6.29:232,6,0	1/1:9,18:27:75.20:1040,75,0	1/1:7,0:7:17.70:134,18,0	1/1:1,8:9:24.05:307,24,0	1/1:1,11:13:33.02:428,33,0	1/1:10,0:10:29.96:255,30,0	1/1:14,0:14:41.88:345,42,0	1/1:1,11:12:27.09:402,27,0	1/1:1,10:11:21.07:313,21,0	1/1:19,0:19:41.99:365,42,0	1/1:0,21:21:57.19:848,57,0	1/1:2,13:15:36.11:517,36,0	1/1:0,12:12:36.12:529,36,0	1/1:2,6:8:21.06:293,21,0	1/1:0,7:7:15.05:224,15,0	1/1:7,0:7:17.98:151,18,0	1/1:9,0:9:23.97:212,24,0	1/1:8,0:8:20.93:178,21,0	1/1:0,8:8:21.07:304,21,0	1/1:1,22:23:69.21:984,69,0	1/1:0,20:20:57.19:844,57,0	1/1:1,15:16:45.15:670,45,0
chr10	41762020	.	A	AACC	7400.83	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=2.604;DP=367;FS=9.209;HRun=0;HaplotypeScore=83.1134;InbreedingCoeff=0.8725;MQ=81.73;MQ0=0;MQRankSum=-6.497;QD=22.36;ReadPosRankSum=4.593;VQSLOD=4.1441;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,0:5:12.03:135,12,0	0/0:7,0:7:21.05:0,21,355	0/0:16,0:17:38.96:0,39,604	0/0:12,0:12:29.94:0,30,416	1/1:19,0:19:24.55:155,25,0	1/1:5,12:19:57.11:1144,57,0	1/1:7,5:13:32.82:562,33,0	1/1:27,0:27:38.50:321,39,0	1/1:3,4:7:17.75:325,18,0	1/1:8,0:9:19.85:107,20,0	1/1:11,0:12:7.62:88,8,0	1/1:2,8:10:30.10:707,30,0	1/1:6,8:14:42.01:772,42,0	1/1:11,0:11:24.02:101,24,0	1/1:10,0:10:18.75:79,19,0	1/1:0,0:19:42.12:485,42,0	1/1:21,0:21:50.81:213,51,0	1/1:13,0:14:25.15:117,25,0	1/1:12,0:12:32.37:162,32,0	1/1:8,0:8:1.66:105,2,0	1/1:7,0:7:13.39:57,13,0	1/1:3,3:7:18.04:302,18,0	1/1:5,5:11:26.99:403,27,0	1/1:2,5:8:20.98:349,21,0	1/1:8,0:8:18.97:84,19,0	1/1:23,0:23:52.12:250,52,0	1/1:20,0:20:50.71:211,51,0	1/1:17,0:17:40.18:168,40,0
chr10	41763052	.	TG	T	23724.39	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=13.231;DP=809;FS=2.481;HRun=2;HaplotypeScore=124.1183;InbreedingCoeff=0.9940;MQ=75.71;MQ0=2;MQRankSum=-5.189;QD=35.95;ReadPosRankSum=4.491;VQSLOD=4.4513;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,53:54:99:1908,147,0	0/0:8,0:8:24.07:0,24,340	0/0:28,0:21:60.20:0,60,881	0/0:40,0:37:99:0,108,1599	0/0:38,0:38:99:0,111,1661	1/1:1,25:26:72.23:935,72,0	1/1:0,29:29:75.24:974,75,0	1/1:1,31:32:93.25:1151,93,0	1/1:0,34:34:90.29:1168,90,0	1/1:1,27:28:81.26:1051,81,0	1/1:0,28:28:81.26:1046,81,0	1/1:0,26:26:75.24:974,75,0	1/1:0,19:19:51.17:662,51,0	0/0:35,0:35:96.33:0,96,1438	1/1:1,38:39:99:1324,102,0	1/1:0,19:19:57.19:740,57,0	1/1:0,25:25:69.22:892,69,0	1/1:2,10:12:15.14:371,15,0	1/1:1,22:23:63.20:816,63,0	1/1:0,44:44:99:1632,129,0	1/1:1,47:48:99:1752,135,0	1/1:0,30:30:87.28:1123,87,0	1/1:0,35:35:99:1318,102,0	1/1:0,23:23:66.21:857,66,0	1/1:0,21:21:54.17:696,54,0	1/1:2,30:32:90.26:1129,90,0	1/1:0,26:26:75.24:971,75,0	1/1:0,7:7:18.06:234,18,0
chr10	41765482	.	TCCCAG	T	1005.72	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.076;DP=540;FS=0.000;HRun=0;HaplotypeScore=117.8925;InbreedingCoeff=0.9848;MQ=80.83;MQ0=0;MQRankSum=-3.429;QD=50.29;ReadPosRankSum=1.931;VQSLOD=3.6920;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:63.22:0,63,2030	0/0:11,0:11:33.11:0,33,1065	0/0:19,0:19:57.19:0,57,1739	0/0:29,0:29:84.59:0,85,2516	0/0:21,0:21:57.20:0,57,1894	0/0:27,0:27:81.28:0,81,2658	0/0:21,0:21:63.22:0,63,2036	0/0:32,0:32:96.32:0,96,2969	0/0:15,0:15:45.15:0,45,1463	0/0:20,0:20:60.21:0,60,1937	0/0:17,0:17:51.18:0,51,1640	0/0:9,0:9:27.09:0,27,898	0/0:23,0:23:60.19:0,60,1868	0/0:21,0:21:63.22:0,63,2023	0/0:14,0:14:42.14:0,42,1374	0/0:29,0:29:87.28:0,87,2767	1/1:0,20:20:48.16:1101,48,0	0/0:8,0:8:24.08:0,24,739	0/0:16,0:16:48.16:0,48,1501	0/0:25,0:25:75.26:0,75,2472	0/0:25,0:25:75.26:0,75,2473	0/0:7,0:7:18.06:0,18,599	0/0:8,0:8:24.08:0,24,797	0/0:16,0:16:45.14:0,45,1421	0/0:25,0:25:75.25:0,75,2410	0/0:23,0:23:69.24:0,69,2296	0/0:30,0:30:90.30:0,90,2896	0/0:8,0:8:24.08:0,24,773
chr10	41765621	.	A	AGT	9404.57	PASS	AB=0.662;AC=43;AF=0.768;AN=56;BaseQRankSum=8.398;DP=408;FS=2.577;HRun=0;HaplotypeScore=207.5111;InbreedingCoeff=0.1940;MQ=65.40;MQ0=2;MQRankSum=-11.157;QD=26.20;ReadPosRankSum=2.680;VQSLOD=5.5191;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:8,8:16:12.66:260,0,13	0/0:9,0:9:27.09:0,27,440	0/0:17,0:16:39.06:0,39,595	0/0:23,0:19:21.15:0,21,610	1/1:8,16:24:7.91:389,8,0	1/1:6,14:20:5.47:422,5,0	1/1:4,7:11:26.60:311,27,0	0/1:11,7:18:99:327,0,234	0/1:8,8:16:51.51:317,0,52	1/1:7,19:26:16.54:822,17,0	1/1:1,20:20:1.46:301,1,0	0/1:4,8:12:41.03:289,0,41	1/1:0,11:11:33.11:471,33,0	1/1:2,11:13:33:429,33,0	1/1:7,13:20:53.74:596,54,0	0/1:6,14:20:20.59:606,0,21	1/1:3,2:5:12.04:167,12,0	1/1:3,4:7:16.91:245,17,0	0/1:5,4:9:3.04:262,0,3	1/1:4,16:20:50.55:486,51,0	1/1:2,2:4:3.01:61,3,0	0/1:4,3:7:44.79:102,0,45	1/1:2,12:14:30.72:312,31,0	1/1:2,2:4:2.85:41,3,0	1/1:7,10:17:0.63:544,1,0	1/1:4,14:18:42.27:794,42,0	1/1:6,16:22:12.61:635,13,0	1/1:0,4:4:12.04:217,12,0
chr10	41765622	.	C	CATACAT	21455.74	PASS	AB=0.750;AC=49;AF=0.875;AN=56;BaseQRankSum=5.580;DP=407;FS=3.485;HRun=0;HaplotypeScore=186.3162;InbreedingCoeff=0.8605;MQ=65.04;MQ0=2;MQRankSum=-9.288;QD=59.77;ReadPosRankSum=-0.251;VQSLOD=5.0975;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,6:17:26.68:683,27,0	0/0:9,0:9:27.09:0,27,605	0/0:17,0:16:42.12:0,42,800	0/0:21,0:18:16.46:0,16,657	1/1:12,12:24:45.13:1046,45,0	1/1:9,11:20:36.11:963,36,0	1/1:4,6:10:27.09:714,27,0	1/1:11,5:16:44.92:855,45,0	1/1:9,7:16:36.10:885,36,0	1/1:9,17:26:61.89:1731,62,0	1/1:3,17:19:45.14:1042,45,0	1/1:5,7:12:36.09:841,36,0	1/1:2,9:11:33.11:956,33,0	1/1:3,10:13:33.11:942,33,0	1/1:7,13:20:60.18:1537,60,0	1/1:6,12:19:51.16:1371,51,0	1/1:4,2:6:12.04:351,12,0	1/1:4,3:7:18.53:510,19,0	1/1:6,3:9:18.05:473,18,0	1/1:2,15:24:48.45:1224,48,0	0/1:2,1:3:0:0,0,0	1/1:5,1:6:12.03:255,12,0	1/1:2,12:14:39.13:983,39,0	1/1:2,2:4:2.92:87,3,0	1/1:8,9:17:36.12:978,36,0	1/1:6,12:18:40.72:1310,41,0	1/1:9,14:23:51.18:1393,51,0	1/1:3,1:4:12.04:325,12,0
chr10	41765625	.	A	AC	433.08	PASS	AB=0.883;AC=13;AF=0.241;AN=54;BaseQRankSum=-1.636;DP=412;FS=3.237;HRun=0;HaplotypeScore=217.4387;InbreedingCoeff=-0.2420;MQ=65.33;MQ0=2;MQRankSum=-5.538;QD=2.22;ReadPosRankSum=-6.871;VQSLOD=0.8274;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:18,1:19:3.52:0,4,211	0/0:9,0:9:27.09:0,27,378	0/0:17,0:16:45.10:0,45,570	0/0:23,0:19:12.07:0,12,505	0/1:20,3:23:49.52:50,0,348	0/0:23,1:24:12.80:0,13,256	0/1:9,1:10:39.98:40,0,48	0/1:14,2:16:46.88:47,0,329	0/1:15,1:16:0.48:0,0,187	0/1:24,2:26:69.24:69,0,158	0/0:21,1:21:15:0,15,431	0/0:11,1:12:7.86:0,8,210	0/1:9,2:11:49.37:91,0,49	0/1:11,1:12:0.80:1,0,119	0/0:20,0:20:50.62:0,51,396	0/1:19,1:20:8.50:9,0,206	0/0:6,0:6:7.77:0,8,36	0/1:6,1:7:27.77:28,0,49	0/1:8,1:9:25.13:25,0,119	0/0:22,1:23:33.69:0,34,399	./.	0/0:5,0:5:8.38:0,8,72	0/0:14,0:14:35.57:0,36,366	0/0:4,0:4:8.29:0,8,47	0/0:15,0:16:30.95:0,31,175	0/1:15,2:17:66.90:67,0,75	0/1:23,1:24:29.39:29,0,233	0/1:1,3:4:1.07:117,0,1
chr10	41765720	.	TA	T	7461.23	PASS	AB=0.545;AC=39;AF=0.696;AN=56;BaseQRankSum=14.889;DP=375;FS=6.674;HRun=1;HaplotypeScore=113.7627;InbreedingCoeff=0.8453;MQ=78.30;MQ0=0;MQRankSum=-12.058;QD=32.58;ReadPosRankSum=0.536;VQSLOD=4.0973;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,5:5:9.03:125,9,0	0/0:8,0:8:24.08:0,24,377	0/0:16,0:16:41.86:0,42,586	0/0:12,0:12:25.71:0,26,349	1/1:0,30:30:63.21:877,63,0	1/1:0,20:20:46.40:630,46,0	1/1:1,3:4:11.93:140,12,0	1/1:0,14:13:36.12:503,36,0	1/1:0,9:9:15.05:209,15,0	0/0:21,0:21:63.20:0,63,966	0/0:22,0:22:66.19:0,66,1007	1/1:0,5:5:12.04:167,12,0	1/1:1,11:12:27.09:376,27,0	1/1:0,8:8:21.07:293,21,0	0/0:22,0:22:66.19:0,66,996	0/1:1,5:6:29.90:191,0,30	1/1:1,4:5:9.03:125,9,0	0/0:24,0:24:66.15:0,66,1000	1/1:0,7:7:21.07:293,21,0	1/1:1,27:28:84.17:1144,84,0	1/1:0,3:3:6.02:84,6,0	1/1:1,11:12:28.86:380,29,0	1/1:0,15:15:39.13:543,39,0	1/1:0,6:6:9.01:125,9,0	0/0:21,0:21:63.21:0,63,1007	1/1:1,18:19:9.22:706,9,0	1/1:0,16:16:30.10:418,30,0	1/1:0,5:5:11.52:132,12,0
chr10	41765725	.	ACTAGGT	A	11837.52	PASS	AB=0.604;AC=38;AF=0.679;AN=56;BaseQRankSum=14.348;DP=358;FS=11.743;HRun=0;HaplotypeScore=128.7312;InbreedingCoeff=0.7683;MQ=75.81;MQ0=0;MQRankSum=-12.480;QD=55.06;ReadPosRankSum=1.773;VQSLOD=4.8170;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,3:4:9.03:216,9,0	0/0:9,0:9:27.09:0,27,905	0/0:15,0:15:42.12:0,42,1325	0/0:10,0:10:24.05:0,24,672	1/1:4,24:28:63.20:1454,63,0	1/1:3,14:17:39.13:916,39,0	1/1:0,3:3:9.03:210,9,0	1/1:4,8:11:21.07:505,21,0	1/1:6,2:8:12.04:260,12,0	0/0:21,0:21:63.22:0,63,2212	0/0:22,0:22:66.23:0,66,2356	1/1:2,4:6:15.05:358,15,0	1/1:3,9:12:27.09:648,27,0	1/1:1,7:8:21.05:456,21,0	0/0:20,0:20:60.19:0,60,2077	0/1:3,3:6:93.15:224,0,93	1/1:0,4:4:9.03:216,9,0	0/0:25,0:25:72.25:0,72,2494	1/1:4,3:7:9.03:216,9,0	1/1:1,26:27:78.27:1851,78,0	1/1:1,2:3:6.02:140,6,0	1/1:0,11:11:33.11:742,33,0	1/1:2,13:15:39.13:931,39,0	1/1:2,4:6:9.03:216,9,0	0/0:21,0:21:60.21:0,60,2164	0/1:3,17:20:51.02:1237,0,51	1/1:2,11:13:30.10:721,30,0	1/1:0,5:5:15.05:319,15,0
chr10	41765878	.	C	CTAGTAGTAG	5406.07	PASS	AB=0.995;AC=21;AF=0.375;AN=56;BaseQRankSum=-9.069;DP=440;FS=4.578;HRun=0;HaplotypeScore=163.8095;InbreedingCoeff=0.2478;MQ=61.67;MQ0=1;MQRankSum=0.426;QD=19.95;ReadPosRankSum=-1.163;VQSLOD=3.9088;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:13,0:13:35.07:35,0,47	0/0:12,0:12:27.07:0,27,663	0/0:19,0:19:13.07:0,13,588	0/0:20,0:18:25.07:0,25,397	0/1:25,0:25:38.60:39,0,571	0/0:17,0:17:10.32:0,10,363	0/0:6,0:6:6.02:0,6,107	0/1:29,0:29:14.43:14,0,144	0/0:8,0:8:4.03:0,4,161	1/1:12,20:32:57.06:1455,57,0	1/1:5,15:22:21.03:872,21,0	0/0:10,0:10:13.86:0,14,240	0/1:15,0:15:4.82:5,0,57	0/0:11,0:11:13.60:0,14,253	1/1:1,20:23:27.09:1241,27,0	0/0:6,0:6:6.02:0,6,122	0/1:16,0:16:86.85:87,0,310	1/1:5,7:13:9.03:329,9,0	0/1:12,0:12:30:30,0,181	0/0:24,0:24:26.38:0,26,719	1/1:13,0:13:2.97:24,3,0	0/1:7,0:7:4.49:4,0,121	0/1:15,0:15:0.12:0,0,200	0/0:12,0:12:3.01:0,3,62	1/1:4,11:15:24.08:1104,24,0	0/1:20,1:21:99:167,0,572	0/0:18,0:18:24.08:0,24,498	0/0:5,0:5:6.02:0,6,124
chr10	41765888	.	TAGTAGTAGTAGC	T	12623.17	PASS	AB=0.640;AC=37;AF=0.661;AN=56;BaseQRankSum=1.421;DP=452;FS=12.979;HRun=0;HaplotypeScore=152.6054;InbreedingCoeff=0.6522;MQ=55.41;MQ0=1;MQRankSum=-4.470;QD=42.79;ReadPosRankSum=1.713;VQSLOD=4.0573;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:8,3:11:63.42:268,0,63	0/0:11,0:11:27.09:0,27,1424	0/0:21,0:19:37.66:0,38,2106	0/0:19,0:17:35.27:0,35,1411	1/1:4,21:25:45:1274,45,0	1/1:6,13:19:21.07:755,21,0	1/1:1,4:5:6.02:216,6,0	1/1:8,25:33:74.90:1238,75,0	1/1:0,9:9:15.05:539,15,0	0/0:27,0:27:13.17:0,13,1821	0/0:25,0:25:27.06:0,27,1017	1/1:2,9:11:15.05:538,15,0	1/1:1,14:15:6.02:215,6,0	1/1:2,11:13:15.05:538,15,0	0/0:24,0:24:33.11:0,33,1649	1/1:0,4:4:6.02:216,6,0	0/1:5,12:17:91.98:632,0,92	0/0:13,0:13:12.03:0,12,505	1/1:4,13:17:35.84:719,36,0	1/1:4,21:25:45.15:1607,45,0	1/1:3,8:11:5.03:78,5,0	1/1:1,6:7:15.05:519,15,0	1/1:3,12:15:18.06:575,18,0	1/1:4,8:12:6.02:195,6,0	0/0:17,0:17:30.10:0,30,1460	0/1:4,19:23:89.59:1423,0,90	1/1:2,16:18:24.08:863,24,0	1/1:3,2:5:6.02:216,6,0
chr10	41766408	.	TG	T	3995.13	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=9.927;DP=692;FS=3.921;HRun=4;HaplotypeScore=70.8840;InbreedingCoeff=0.9979;MQ=91.38;MQ0=0;MQRankSum=-2.613;QD=33.02;ReadPosRankSum=1.186;VQSLOD=4.4117;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:81.27:0,81,1125	0/0:6,0:6:18.06:0,18,252	0/0:26,0:26:69.23:0,69,937	0/0:31,0:30:69.22:0,69,929	0/0:30,0:30:90.30:0,90,1259	0/0:21,0:21:63.17:0,63,857	0/0:23,0:23:60.20:0,60,840	0/0:28,0:28:72.24:0,72,1007	0/0:23,0:23:69.23:0,69,966	1/1:2,31:33:93.29:1115,93,0	1/1:0,11:11:33.10:396,33,0	0/0:29,0:29:81.26:0,81,1116	0/0:25,0:25:72.24:0,72,1007	0/0:31,0:31:87.29:0,87,1218	1/1:3,40:43:99:1368,114,0	0/0:24,0:24:69.22:0,69,949	0/0:19,0:19:54.18:0,54,750	1/1:0,13:13:36.11:432,36,0	0/0:23,0:23:69.21:0,69,935	0/0:21,0:21:57.19:0,57,798	0/0:34,0:34:96.31:0,96,1325	0/0:32,0:32:87.28:0,87,1202	0/0:20,0:20:60.18:0,60,808	0/0:27,0:27:75.25:0,75,1049	1/1:2,19:21:57.17:684,57,0	0/0:26,1:27:36.22:0,36,915	0/0:31,0:31:90.30:0,90,1260	0/0:11,0:11:33.11:0,33,462
chr10	41766772	.	A	AG	21800.24	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-15.524;DP=719;FS=2.832;HRun=1;HaplotypeScore=60.2812;InbreedingCoeff=0.9979;MQ=78.93;MQ0=0;MQRankSum=-4.071;QD=39.64;ReadPosRankSum=3.929;VQSLOD=5.5220;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,39:43:99:1664,111,0	0/0:12,0:12:33.11:0,33,428	0/0:19,0:20:49.04:0,49,625	0/0:11,0:11:32.43:0,32,349	1/1:0,24:24:63.21:940,63,0	1/1:0,13:13:36.12:540,36,0	1/1:4,22:26:54.18:809,54,0	1/1:3,34:37:99:1482,99,0	1/1:1,24:25:69.23:1034,69,0	0/0:16,0:16:48.16:0,48,623	0/0:18,0:18:51.14:0,51,635	1/1:1,35:36:96.33:1438,96,0	1/1:1,33:34:90.30:1337,90,0	1/1:0,33:33:93.32:1394,93,0	0/0:34,0:34:99:0,99,1285	1/1:1,28:29:75.25:1124,75,0	1/1:2,34:36:76.38:1374,76,0	0/0:30,0:30:84.27:0,84,1090	1/1:1,6:7:21.07:303,21,0	1/1:1,25:26:66.22:989,66,0	1/1:4,40:44:99:1659,111,0	1/1:1,23:24:63.21:944,63,0	1/1:1,18:19:54.18:809,54,0	1/1:1,34:35:99:1529,102,0	0/0:28,0:28:78.25:0,78,1013	1/1:1,29:30:48.32:1218,48,0	1/1:0,23:22:63.21:944,63,0	1/1:0,6:6:18.06:270,18,0
chr10	41767256	.	AG	A	15485.05	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=17.672;DP=754;FS=3.880;HRun=6;HaplotypeScore=173.3028;InbreedingCoeff=0.9946;MQ=90.80;MQ0=0;MQRankSum=-5.159;QD=26.93;ReadPosRankSum=2.324;VQSLOD=2.6992;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,46:48:99:1354,126,0	0/0:9,0:9:27.09:0,27,355	0/0:35,0:35:96.30:0,96,1238	0/0:27,0:26:72.23:0,72,940	1/1:3,24:27:63.16:677,63,0	1/1:3,28:31:81.20:871,81,0	1/1:5,20:25:54.13:580,54,0	1/1:2,30:32:90.20:958,90,0	1/1:2,25:27:72.18:773,72,0	0/0:28,0:27:72.22:0,72,933	0/0:15,0:14:36.12:0,36,469	1/1:5,31:36:87.22:935,87,0	1/1:7,24:31:69.17:741,69,0	1/1:2,27:29:75.19:806,75,0	0/0:28,0:28:81.24:0,81,1038	1/1:4,26:30:75.19:806,75,0	1/1:4,39:43:99:1161,108,0	0/0:15,0:15:45.15:0,45,592	1/1:3,17:20:48.10:509,48,0	1/1:2,16:18:33.08:355,33,0	1/1:1,33:34:94.12:1002,94,0	1/1:2,25:27:69.17:742,69,0	1/1:0,20:20:54.14:580,54,0	1/1:2,22:24:54.13:580,54,0	0/0:22,0:22:60.19:0,60,783	1/1:1,34:35:99:1088,102,0	1/1:2,28:30:78.19:838,78,0	1/1:0,8:8:12.03:129,12,0
chr10	41767511	.	T	TACACACACACACAC	6919.72	PASS	AB=1.000;AC=50;AF=0.926;AN=54;BaseQRankSum=-0.484;DP=560;FS=3.024;HRun=0;HaplotypeScore=261.3531;InbreedingCoeff=0.2508;MQ=60.02;MQ0=8;MQRankSum=-0.107;QD=12.84;ReadPosRankSum=2.487;VQSLOD=3.7451;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:30:12.04:192,12,0	0/0:7,0:7:15.05:0,15,472	1/1:42,0:22:2.96:19,3,0	0/1:29,0:23:8.01:8,0,53	1/1:25,1:26:7.14:134,7,0	1/1:24,0:24:8.95:244,9,0	1/1:22,0:21:3.48:48,3,0	1/1:24,0:23:29.90:331,30,0	1/1:21,0:21:9.50:264,10,0	1/1:10,0:15:22.01:650,22,0	1/1:19,0:18:12.33:400,12,0	1/1:12,0:12:3.01:142,3,0	1/1:15,0:13:24.08:804,24,0	1/1:19,0:20:8.62:292,9,0	./.	1/1:12,0:14:12.04:411,12,0	1/1:25,0:24:29.26:285,29,0	1/1:17,0:17:36:778,36,0	1/1:11,0:9:12.01:226,12,0	1/1:29,0:30:2.99:25,3,0	1/1:17,0:15:9:130,9,0	1/1:17,0:17:8.58:74,9,0	1/1:15,0:14:2.99:24,3,0	0/1:18,0:18:20.71:225,0,21	1/1:10,0:28:0.47:1,0,0	1/1:24,0:23:41.50:766,42,0	1/1:13,0:13:13.87:287,14,0	1/1:6,0:5:6.02:159,6,0
chr10	41767544	.	G	GCA	1414.43	PASS	AB=0.967;AC=29;AF=0.518;AN=56;BaseQRankSum=5.494;DP=554;FS=6.804;HRun=0;HaplotypeScore=194.4906;InbreedingCoeff=0.1057;MQ=39.13;MQ0=20;MQRankSum=-4.465;QD=3.38;ReadPosRankSum=0.642;VQSLOD=2.2230;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:4.59:0,5,22	0/0:9,0:9:27.06:0,27,361	0/0:20,0:8:11.63:0,12,133	0/0:26,0:10:8.97:0,9,169	0/1:23,0:22:2.45:7,0,2	1/1:17,2:19:12.10:90,12,0	1/1:17,5:21:3.45:63,3,0	0/1:32,0:28:43.81:259,0,44	0/1:18,3:20:1.17:38,0,1	0/0:22,0:21:18.38:0,18,496	0/1:17,0:16:5.87:6,0,165	0/1:10,5:14:3.33:29,0,3	1/1:15,3:16:16.80:114,17,0	1/1:16,0:15:7.19:46,7,0	0/0:11,0:11:12.03:0,12,144	1/1:15,1:16:8.98:88,9,0	0/1:29,0:26:50.50:159,0,50	0/1:21,0:21:37.05:37,0,331	0/1:14,0:12:57.08:57,0,88	1/1:23,0:23:2.42:21,2,0	0/1:19,0:16:0.60:16,0,1	0/0:12,3:14:8.45:0,8,28	0/1:16,1:17:1.66:26,0,2	1/1:12,1:13:4.55:28,5,0	0/1:22,0:21:4.15:4,0,106	0/1:36,0:35:96.07:310,0,96	0/1:19,0:19:21.89:129,0,22	1/1:6,0:5:8.79:56,9,0
chr10	41767546	.	ACG	A	1881.65	PASS	AB=0.897;AC=29;AF=0.518;AN=56;BaseQRankSum=4.549;DP=548;FS=7.536;HRun=0;HaplotypeScore=186.5376;InbreedingCoeff=-0.0540;MQ=39.41;MQ0=21;MQRankSum=-6.161;QD=4.27;ReadPosRankSum=-4.983;VQSLOD=0.5677;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:29,3:32:2.92:29,3,0	0/0:9,0:9:27.09:0,27,470	0/0:18,0:7:14.84:0,15,254	0/0:24,0:9:23.63:0,24,365	1/1:22,0:21:9.23:37,9,0	1/1:12,7:19:17.13:150,17,0	0/1:16,6:21:35.95:91,0,36	0/1:28,5:29:5.52:485,0,6	0/1:11,10:20:36.43:48,0,36	0/0:22,0:21:28.69:0,29,906	0/1:18,0:17:0.26:0,0,409	0/1:8,7:14:16.75:59,0,17	1/1:12,6:16:6.13:121,6,0	1/1:16,0:15:12.08:66,12,0	0/0:12,0:12:15.04:0,15,249	0/1:16,0:16:3.88:41,0,4	0/1:27,1:24:90.12:173,0,90	0/1:21,0:21:35.67:36,0,552	0/1:14,0:12:17.23:73,0,17	0/1:23,0:23:14.78:15,0,36	1/1:18,1:16:4.83:17,5,0	0/1:11,4:14:10.70:11,0,48	0/1:11,5:16:22.86:35,0,23	1/1:10,4:13:4.54:28,5,0	0/0:22,0:21:17.25:0,17,215	0/1:32,3:34:99:385,0,145	0/1:18,0:18:65.39:116,0,65	0/1:6,0:5:1.69:39,0,2
chr10	41767548	.	G	GCA	2939.61	PASS	AB=0.838;AC=31;AF=0.554;AN=56;BaseQRankSum=5.108;DP=541;FS=4.027;HRun=0;HaplotypeScore=189.2682;InbreedingCoeff=0.2690;MQ=41.55;MQ0=19;MQRankSum=-4.439;QD=7.56;ReadPosRankSum=1.049;VQSLOD=3.3617;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,13:36:1.97:0,2,19	0/0:10,0:10:30.09:0,30,408	0/0:19,0:8:15.05:0,15,209	0/0:25,0:10:24.96:0,25,329	1/1:10,10:19:0.56:9,1,0	1/1:17,2:19:11.75:71,12,0	1/1:17,5:21:0.84:29,1,0	1/1:18,12:26:52.90:804,53,0	0/1:18,3:20:1.27:32,0,1	0/0:20,0:19:50.96:0,51,671	0/0:16,0:15:22.65:0,23,286	0/1:10,5:14:1.86:25,0,2	1/1:14,3:15:15.51:125,16,0	1/1:8,8:16:8.61:119,9,0	0/0:9,0:9:15.04:0,15,197	1/1:12,5:17:8.97:93,9,0	0/1:19,7:24:51.74:261,0,52	0/1:22,0:22:18.34:18,0,485	1/1:12,3:13:3.63:206,4,0	1/1:11,12:23:8.85:49,9,0	0/0:12,5:14:1.36:0,1,7	0/1:12,3:14:13.26:13,0,18	0/1:11,1:12:1.70:14,0,2	1/1:18,1:18:0.94:3,1,0	0/1:21,0:20:1.15:1,0,137	0/1:22,13:34:38.98:709,0,39	0/1:8,10:18:21.71:405,0,22	1/1:1,4:5:8.99:124,9,0
chr10	41767550	.	ACG	A	2311.21	PASS	AB=0.918;AC=30;AF=0.536;AN=56;BaseQRankSum=6.027;DP=547;FS=7.207;HRun=0;HaplotypeScore=188.0540;InbreedingCoeff=0.1072;MQ=49.19;MQ0=18;MQRankSum=-6.909;QD=5.49;ReadPosRankSum=-2.536;VQSLOD=2.2148;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:36,0:36:15.37:151,15,0	0/0:10,0:10:30.10:0,30,513	0/0:23,0:12:32.85:0,33,466	0/0:26,0:11:27.43:0,27,455	1/1:19,2:20:9.23:37,9,0	1/1:19,0:19:14.44:61,14,0	0/1:21,1:21:36.89:44,0,37	0/1:25,4:26:15.26:515,0,15	0/1:20,1:20:31.18:31,0,32	0/0:20,0:19:51.17:0,51,950	0/0:16,0:15:22.60:0,23,443	0/1:14,1:14:16.45:20,0,16	1/1:16,1:15:4.56:95,5,0	1/1:16,1:16:19.20:102,19,0	0/0:9,0:9:15.05:0,15,271	1/1:18,0:18:11.12:80,11,0	0/1:23,3:24:99:153,0,101	0/1:22,0:22:20.32:20,0,639	0/1:11,6:15:2.20:345,0,2	0/1:20,2:22:11.20:15,0,11	1/1:15,2:14:2.36:14,2,0	0/1:14,0:14:12.34:12,0,50	0/1:11,1:12:14.46:14,0,23	1/1:19,0:18:8.97:72,9,0	0/0:22,0:21:20.27:0,20,279	0/1:30,3:32:99:430,0,101	0/1:16,2:18:67.34:218,0,67	1/1:5,0:5:10.70:68,11,0
chr10	41767552	.	G	GCA	1919.13	PASS	AB=0.981;AC=32;AF=0.571;AN=56;BaseQRankSum=6.014;DP=538;FS=4.560;HRun=0;HaplotypeScore=188.3663;InbreedingCoeff=0.4218;MQ=53.20;MQ0=17;MQRankSum=-6.199;QD=4.92;ReadPosRankSum=1.696;VQSLOD=2.5070;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:35,0:35:8.88:116,9,0	0/0:10,0:10:24.08:0,24,342	0/0:26,0:15:39.03:0,39,464	0/0:25,0:11:28.73:0,29,409	1/1:22,0:21:3.54:32,4,0	1/1:19,0:19:7.76:32,8,0	1/1:21,0:20:0.34:29,0,0	0/1:30,0:27:2.07:364,0,2	0/1:21,1:21:4.02:31,0,4	0/0:20,0:19:51.12:0,51,679	0/0:16,0:15:24.23:0,24,291	0/1:16,0:15:0.28:29,0,0	1/1:17,1:16:6.01:36,6,0	1/1:17,0:16:8.48:54,8,0	0/0:9,0:9:15.05:0,15,215	1/1:14,3:17:9.02:109,9,0	0/1:21,3:21:25.47:220,0,25	0/0:21,0:21:40.96:0,41,555	1/1:16,0:14:3.91:260,4,0	1/1:19,1:20:8.89:71,9,0	0/1:14,0:11:0:1,0,0	0/1:15,0:14:4.34:18,0,4	0/1:11,0:11:1.67:18,0,2	1/1:19,1:19:11.98:98,12,0	0/0:21,0:21:4.86:0,5,219	1/1:31,0:30:7.66:332,8,0	0/1:17,0:17:15.73:170,0,16	1/1:5,0:5:11.82:77,12,0
chr10	41767555	.	C	CA	3441.86	PASS	AB=0.632;AC=28;AF=0.500;AN=56;BaseQRankSum=7.176;DP=536;FS=9.150;HRun=1;HaplotypeScore=178.3132;InbreedingCoeff=0.1375;MQ=54.82;MQ0=17;MQRankSum=-6.418;QD=8.96;ReadPosRankSum=0.715;VQSLOD=0.5681;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:13,22:36:11.96:212,0,12	0/0:9,0:9:24.08:0,24,332	0/0:27,0:16:41.90:0,42,565	0/0:25,0:11:7.65:0,8,392	0/1:8,10:19:2.45:38,0,2	0/1:9,9:18:9.50:112,0,9	1/1:7,13:19:22.19:176,22,0	0/1:8,23:28:93.36:656,0,93	0/1:9,13:21:16.57:34,0,17	0/0:21,0:20:57.18:0,57,770	0/0:15,0:14:24.07:0,24,334	1/1:4,11:15:1.05:114,1,0	0/1:9,8:15:27.88:108,0,28	1/1:6,11:16:8:113,8,0	0/0:11,0:11:18.05:0,18,234	1/1:8,7:15:8.86:97,9,0	0/1:11,13:21:90.88:225,0,91	0/0:22,0:22:52.82:0,53,653	0/1:8,8:15:66.87:293,0,67	1/1:9,12:21:6.42:32,6,0	0/1:3,9:10:0.03:0,0,0	1/1:4,10:13:10.39:70,10,0	1/1:4,6:10:8.20:59,8,0	1/1:5,14:19:12:166,12,0	0/0:22,0:22:10.23:0,10,239	0/1:12,16:29:97.49:585,0,97	0/1:8,10:18:62.30:249,0,62	0/1:1,4:5:8.18:101,0,8
chr10	41767556	.	G	GCACACGCACAC	11530.58	PASS	AB=1.000;AC=41;AF=0.732;AN=56;BaseQRankSum=4.630;DP=543;FS=2.277;HRun=0;HaplotypeScore=235.9838;InbreedingCoeff=0.8294;MQ=55.95;MQ0=16;MQRankSum=-10.335;QD=27.99;ReadPosRankSum=-1.523;VQSLOD=4.2491;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:34,0:34:37.60:519,38,0	0/0:9,0:9:24.08:0,24,728	0/0:28,0:17:45.14:0,45,1036	0/0:25,0:11:31.66:0,32,929	1/1:21,0:20:5.36:82,5,0	1/1:18,0:18:17.04:455,17,0	1/1:20,0:19:15.01:295,15,0	1/1:30,0:28:73.38:1795,73,0	1/1:19,0:22:26.88:431,27,0	0/1:22,0:21:15.43:15,0,1277	0/0:14,0:13:24.55:0,25,661	1/1:17,0:16:16.32:263,16,0	1/1:14,0:15:12.23:282,12,0	1/1:16,0:15:20.57:433,21,0	0/0:12,0:12:21.06:0,21,561	1/1:12,0:14:17.98:601,18,0	1/1:24,0:21:45.08:1114,45,0	0/0:21,0:21:48.14:0,48,1303	1/1:19,0:17:38.96:930,39,0	1/1:15,3:20:14.74:151,15,0	1/1:14,0:11:12.81:81,13,0	1/1:15,0:14:5.53:222,6,0	1/1:12,0:12:6:112,6,0	1/1:21,0:20:20.83:347,21,0	0/0:22,0:22:21.03:0,21,541	1/1:28,1:28:78.09:2238,78,0	1/1:16,2:21:38.66:918,39,0	1/1:5,0:5:12.04:246,12,0
chr10	41767845	.	TA	T	1717.17	PASS	AB=0.563;AC=9;AF=0.161;AN=56;BaseQRankSum=-8.033;DP=570;FS=6.797;HRun=12;HaplotypeScore=97.5463;InbreedingCoeff=0.7522;MQ=70.99;MQ0=0;MQRankSum=3.822;QD=14.68;ReadPosRankSum=2.557;VQSLOD=4.0231;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:9.58:0,10,41	0/0:13,0:13:33.07:0,33,335	0/0:18,0:16:20.79:0,21,219	0/0:14,1:14:0.85:0,1,170	0/0:10,0:23:33.89:0,34,178	0/0:9,0:36:44.11:0,44,232	0/0:6,0:22:28.52:0,29,149	0/0:18,0:19:4.95:0,5,101	0/0:4,0:25:28.41:0,28,143	1/1:4,24:30:69.75:522,70,0	0/1:4,12:18:11:204,0,11	0/0:3,0:18:22.85:0,23,120	0/0:5,0:19:30.60:0,31,161	0/0:12,0:26:34.87:0,35,207	1/1:4,24:28:59.76:464,60,0	0/0:17,0:17:5.66:0,6,17	0/0:25,0:25:54.75:0,55,500	1/1:0,17:17:35.83:279,36,0	0/0:17,0:16:23.74:0,24,158	0/0:8,0:20:23.85:0,24,127	0/0:10,0:10:10.75:0,11,67	0/0:3,0:18:20.42:0,20,136	0/0:4,0:20:25.17:0,25,131	0/0:3,0:14:19.89:0,20,101	1/1:4,20:24:29.31:411,29,0	0/0:8,0:23:38.10:0,38,224	0/0:10,0:19:29.34:0,29,189	0/0:5,0:9:17.62:0,18,117
chr10	41767856	.	AAC	A	1061.91	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=-3.204;DP=565;FS=3.098;HRun=0;HaplotypeScore=97.6789;InbreedingCoeff=0.7681;MQ=71.64;MQ0=0;MQRankSum=-0.797;QD=16.59;ReadPosRankSum=3.622;VQSLOD=3.5388;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,20:22:48.16:643,48,0	0/0:13,0:13:36.11:0,36,557	0/0:20,1:19:13.51:0,14,540	0/0:13,0:12:26.96:0,27,337	0/0:24,0:24:49.84:0,50,483	0/0:32,0:32:51.02:0,51,544	0/0:20,0:20:42.07:0,42,432	0/0:15,0:15:33.05:0,33,366	0/0:23,0:23:30.06:0,30,318	0/0:31,0:31:81.88:0,82,524	0/0:18,0:18:27.73:0,28,310	0/0:19,0:19:30.02:0,30,298	0/0:17,0:17:35.91:0,36,372	0/0:22,0:22:29.99:0,30,297	0/0:27,0:27:67.40:0,67,403	1/1:0,19:19:39.13:523,39,0	0/1:23,0:23:25.56:26,0,180	0/0:20,0:20:46.84:0,47,277	0/0:19,0:18:37:0,37,417	0/0:20,0:20:23.97:0,24,216	0/0:13,0:13:30.02:0,30,342	0/0:23,0:23:53.66:0,54,491	0/0:23,0:23:40.99:0,41,404	0/0:13,0:13:27.06:0,27,292	0/0:26,0:26:69.74:0,70,452	0/0:15,0:15:24.16:0,24,224	0/0:21,0:21:27:0,27,264	0/0:13,0:13:20.73:0,21,204
chr10	41768346	.	A	AGAT	33916.21	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-4.119;DP=691;FS=8.147;HRun=0;HaplotypeScore=107.3202;InbreedingCoeff=0.9964;MQ=71.82;MQ0=0;MQRankSum=-7.058;QD=51.86;ReadPosRankSum=5.296;VQSLOD=6.7685;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,24:29:54.19:1222,54,0	0/0:12,0:12:36.07:0,36,540	0/0:16,0:16:43.84:0,44,600	0/0:9,0:9:18.01:0,18,258	1/1:3,22:26:63.22:1361,63,0	1/1:1,26:28:69.24:1533,69,0	1/1:2,13:15:36.12:815,36,0	1/1:5,23:29:78.18:1481,78,0	1/1:2,24:26:66.23:1481,66,0	1/1:3,31:34:96.29:2027,96,0	1/1:3,25:28:63.22:1393,63,0	1/1:5,24:30:63.22:1425,63,0	1/1:4,28:32:69.24:1563,69,0	1/1:2,25:27:63.22:1413,63,0	1/1:4,26:31:60.21:1347,60,0	1/1:1,25:29:69.24:1534,69,0	1/1:1,19:20:54.19:1222,54,0	1/1:0,13:13:33.11:747,33,0	1/1:8,22:30:75.23:1537,75,0	1/1:3,30:33:78.27:1735,78,0	1/1:2,22:25:51.18:1156,51,0	1/1:0,30:32:84.29:1777,84,0	1/1:2,24:26:54.19:1175,54,0	1/1:0,16:16:33.11:747,33,0	1/1:2,23:25:66.23:1465,66,0	1/1:2,27:30:87.25:1752,87,0	1/1:4,23:26:63.22:1397,63,0	1/1:2,11:13:27.09:611,27,0
chr10	41768603	.	GTA	G	5383.54	PASS	AB=0.931;AC=11;AF=0.196;AN=56;BaseQRankSum=16.586;DP=755;FS=14.425;HRun=0;HaplotypeScore=98.9551;InbreedingCoeff=0.8952;MQ=91.51;MQ0=0;MQRankSum=-1.471;QD=34.96;ReadPosRankSum=3.668;VQSLOD=6.5961;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:84.21:0,84,1482	0/0:10,0:10:30.10:0,30,579	0/0:26,0:26:78.13:0,78,1333	0/0:35,0:35:95.73:0,96,1628	0/0:25,0:25:72.22:0,72,1328	0/0:24,0:24:72.21:0,72,1310	0/0:21,0:21:60.14:0,60,1046	0/0:34,0:34:99:0,102,1871	0/0:20,0:20:57.18:0,57,1045	1/1:0,36:36:99:1575,108,0	1/1:0,25:25:69.23:1046,69,0	0/0:32,0:32:93.28:0,93,1718	0/0:37,0:37:99:0,111,2120	0/0:26,0:26:78.27:0,78,1505	1/1:0,30:30:78.26:1193,78,0	0/0:26,0:26:75.24:0,75,1388	0/0:26,0:26:78.21:0,78,1403	1/1:1,15:16:45.15:688,45,0	0/0:17,0:17:51.15:0,51,943	0/0:30,0:30:90.28:0,90,1652	0/0:35,0:35:99:0,102,1864	0/0:33,0:33:93.30:0,93,1761	0/0:30,0:30:90.26:0,90,1624	0/0:33,0:33:99:0,99,1797	1/1:0,20:20:57.19:872,57,0	0/1:25,2:27:10.60:11,0,1323	0/0:38,0:38:99:0,114,2096	0/0:14,0:14:42.14:0,42,810
chr10	41769217	.	C	CTT	4463.08	PASS	AB=0.992;AC=33;AF=0.589;AN=56;BaseQRankSum=12.534;DP=541;FS=3.582;HRun=8;HaplotypeScore=193.8556;InbreedingCoeff=-0.0800;MQ=75.68;MQ0=0;MQRankSum=-11.068;QD=9.22;ReadPosRankSum=3.463;VQSLOD=0.9462;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:21:29.28:237,29,0	0/0:9,0:9:27.07:0,27,301	0/0:19,0:19:44.90:0,45,445	0/0:18,0:18:42.05:0,42,442	0/1:23,0:24:60.41:84,0,60	0/1:22,0:22:27.24:27,0,89	0/1:14,0:14:6.57:7,0,131	0/1:30,0:30:6.65:7,0,320	0/1:18,0:18:27.29:27,0,159	1/1:12,14:28:64.97:827,65,0	1/1:13,12:25:51.08:723,51,0	0/1:15,0:15:26.31:26,0,64	0/1:19,0:19:37.61:38,0,85	0/1:17,0:17:5.48:5,0,226	1/1:10,20:30:83.91:1091,84,0	1/1:24,0:24:52.54:300,53,0	1/1:11,0:11:8.77:52,9,0	1/1:2,9:11:21.07:310,21,0	0/0:11,0:11:7.83:0,8,186	0/1:27,0:27:36.02:36,0,128	0/1:16,0:16:21.38:21,0,77	0/1:10,0:10:19.52:20,0,75	0/1:21,0:21:32.47:32,0,57	1/1:9,0:9:2.05:29,2,0	1/1:9,4:13:35.37:394,35,0	0/1:31,3:34:99:139,0,147	0/1:27,0:27:25.84:26,0,189	0/1:18,0:18:5.82:6,0,167
chr10	41769223	.	T	TTATTGTTG	25329.35	PASS	AB=1.000;AC=31;AF=0.554;AN=56;BaseQRankSum=8.314;DP=536;FS=2.670;HRun=0;HaplotypeScore=168.4700;InbreedingCoeff=-0.3472;MQ=78.19;MQ0=0;MQRankSum=-12.403;QD=52.12;ReadPosRankSum=9.565;VQSLOD=4.1755;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:5,12:32:30.10:1161,30,0	0/0:10,0:10:27.09:0,27,695	0/0:23,0:23:61.01:0,61,1166	0/0:17,0:17:42.14:0,42,1001	0/1:23,0:23:68.37:1275,0,68	0/1:20,0:20:99:1190,0,113	0/1:13,0:13:99:495,0,165	0/1:24,0:24:99:701,0,376	0/1:18,0:18:99:1010,0,163	0/1:27,0:27:37.14:1242,0,37	1/1:22,0:22:11.49:909,11,0	0/1:15,0:15:92.72:892,0,93	0/1:18,0:18:90.55:1200,0,91	0/1:17,0:17:99:579,0,245	1/1:29,0:29:28.18:2210,28,0	1/1:0,22:29:54.19:2352,54,0	1/1:0,8:13:9.03:393,9,0	0/1:9,0:9:1.11:500,0,1	0/1:11,0:11:87.68:422,0,88	0/1:23,0:23:78.66:1470,0,79	0/1:13,0:13:78.53:536,0,79	0/1:10,0:10:78.12:607,0,78	0/1:20,0:20:99:992,0,128	0/1:9,0:9:6.96:537,0,7	1/1:18,0:18:31.14:882,31,0	0/1:31,0:31:99:2048,0,108	0/1:24,0:24:99:988,0,196	0/1:18,0:18:99:740,0,172
chr10	41769226	.	A	ATTGTTGTTG	44565.95	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-2.976;DP=598;FS=18.261;HRun=0;HaplotypeScore=148.6890;InbreedingCoeff=0.9834;MQ=77.09;MQ0=0;MQRankSum=-10.002;QD=81.77;ReadPosRankSum=3.936;VQSLOD=3.5091;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:25:39.06:1137,39,0	0/0:12,0:12:30.02:0,30,676	0/0:22,0:23:55.05:0,55,1160	0/0:18,0:18:33.08:0,33,854	1/1:4,21:27:57.19:2306,57,0	1/1:4,17:21:48.16:2164,48,0	1/1:4,9:15:21.07:922,21,0	1/1:10,16:31:69.21:2509,69,0	1/1:6,16:24:48.16:2094,48,0	1/1:19,8:27:57.19:2186,57,0	1/1:16,6:22:51.15:1640,51,0	1/1:4,12:17:36.12:1596,36,0	1/1:4,18:22:48.16:2204,48,0	1/1:9,9:19:30.10:1298,30,0	1/1:11,17:28:75.26:3196,75,0	1/1:25,0:25:54.19:2140,54,0	1/1:7,0:7:12.03:385,12,0	1/1:4,5:9:21.07:879,21,0	1/1:4,11:18:48.15:1487,48,0	1/1:2,26:33:63.21:2668,63,0	1/1:5,9:16:24.08:1045,24,0	1/1:3,8:15:30.02:1198,30,0	1/1:4,21:28:42.14:1785,42,0	1/1:1,7:9:21.07:909,21,0	1/1:16,4:20:45.12:1290,45,0	1/1:4,31:35:87.30:3786,87,0	1/1:7,18:33:42.14:1863,42,0	1/1:6,11:19:42.14:1879,42,0
chr10	41770184	.	GAT	G	5337.20	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=12.400;DP=601;FS=5.353;HRun=0;HaplotypeScore=70.8403;InbreedingCoeff=0.9993;MQ=84.18;MQ0=1;MQRankSum=-1.044;QD=39.83;ReadPosRankSum=3.848;VQSLOD=6.4662;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:99:0,99,1800	0/0:9,0:9:27.09:0,27,493	0/0:23,0:23:63.22:0,63,1132	0/0:17,0:17:51.17:0,51,927	0/0:30,0:30:87.30:0,87,1615	1/1:0,21:21:60.20:883,60,0	1/1:2,15:17:42.14:613,42,0	0/0:42,0:42:99:0,114,2063	1/1:0,22:22:60.20:883,60,0	0/0:27,0:27:75.23:0,75,1291	0/0:13,0:13:33.11:0,33,618	1/1:0,18:17:48.16:705,48,0	1/1:1,20:21:57.19:839,57,0	0/0:23,0:23:69.21:0,69,1230	0/0:22,0:22:66.23:0,66,1236	0/0:28,0:28:84.29:0,84,1565	0/0:19,0:19:57.20:0,57,1067	0/0:18,0:18:54.18:0,54,975	0/0:24,0:24:66.20:0,66,1181	0/0:26,0:26:78.27:0,78,1450	0/0:19,0:19:51.15:0,51,922	1/1:0,8:8:24.08:353,24,0	1/1:0,17:17:45.15:662,45,0	1/1:0,10:10:27.09:397,27,0	0/0:21,0:21:63.19:0,63,1147	0/0:25,0:25:75.26:0,75,1390	0/0:34,0:34:96.33:0,96,1797	0/0:14,0:14:42.14:0,42,786
chr10	41771581	.	AACAC	A	2742.60	PASS	AB=1.000;AC=25;AF=0.446;AN=56;BaseQRankSum=5.896;DP=514;FS=3.056;HRun=0;HaplotypeScore=143.4820;InbreedingCoeff=0.5366;MQ=69.89;MQ0=10;MQRankSum=-3.691;QD=10.39;ReadPosRankSum=2.848;VQSLOD=2.8318;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:19.50:0,20,167	0/0:8,0:10:23.82:0,24,450	0/0:29,0:18:8.37:0,8,77	0/0:28,0:22:28.37:0,28,297	0/0:19,0:19:5.65:0,6,336	1/1:10,5:15:32.88:434,33,0	1/1:14,4:18:23.90:356,24,0	0/0:33,0:29:2.63:0,3,22	1/1:11,5:16:30.10:442,30,0	0/0:19,0:18:3.53:0,4,21	0/1:13,0:13:18.92:26,0,19	1/1:13,7:21:32.94:448,33,0	1/1:13,6:19:27.09:395,27,0	0/0:16,0:16:27.51:0,28,395	1/1:15,0:15:8.99:77,9,0	0/1:23,0:23:99:115,0,130	0/0:21,0:21:18.53:0,19,330	0/0:11,0:10:0.94:0,1,2	0/0:13,0:13:2.94:0,3,23	0/0:17,0:17:5.70:0,6,46	0/0:15,0:15:0.42:0,0,1	1/1:6,17:23:12.04:178,12,0	1/1:4,13:17:14.73:193,15,0	1/1:13,1:14:14.64:191,15,0	1/1:29,0:29:6.44:47,6,0	0/1:14,0:14:5.20:5,0,22	0/1:14,0:13:4.34:21,0,4	0/1:13,0:13:0.01:0,0,0
chr10	41771599	.	CACACACAT	C	6074.57	PASS	AB=1.000;AC=45;AF=0.804;AN=56;BaseQRankSum=-0.489;DP=535;FS=10.075;HRun=0;HaplotypeScore=166.4708;InbreedingCoeff=0.1834;MQ=49.96;MQ0=13;MQRankSum=-3.450;QD=12.03;ReadPosRankSum=-5.097;VQSLOD=1.3519;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:18,0:18:34.16:34,0,236	0/0:14,0:14:12.12:0,12,854	0/1:18,0:4:3.07:3,0,16	0/1:21,0:14:28.90:29,0,35	0/1:17,0:17:57.75:58,0,555	1/1:13,0:13:29.98:409,30,0	1/1:25,0:25:46.83:423,47,0	1/1:28,0:23:40.02:377,40,0	1/1:15,0:15:35.90:483,36,0	1/1:19,1:19:33.74:406,34,0	0/0:16,0:16:2.80:0,3,13	1/1:26,0:26:53.13:626,53,0	1/1:21,0:21:42.39:537,42,0	0/1:23,0:23:55.62:56,0,567	1/1:2,20:22:12.04:262,12,0	0/1:25,0:25:79.41:79,0,253	0/1:23,0:23:6.23:6,0,514	1/1:15,0:14:29.54:211,30,0	1/1:11,0:11:19.29:137,19,0	1/1:19,0:19:3.48:34,3,0	1/1:18,0:17:8.06:167,8,0	1/1:20,0:20:17.96:278,18,0	1/1:19,0:19:23.66:315,24,0	1/1:18,0:18:20.81:194,21,0	1/1:0,25:25:6.49:159,6,0	1/1:13,0:13:25.98:211,26,0	1/1:15,1:16:43.24:363,43,0	1/1:16,0:16:17.39:220,17,0
chr10	41771601	.	CACACAT	C	6097.29	PASS	AB=1.000;AC=47;AF=0.839;AN=56;BaseQRankSum=-0.780;DP=534;FS=8.481;HRun=0;HaplotypeScore=153.6848;InbreedingCoeff=0.1436;MQ=49.56;MQ0=13;MQRankSum=-3.374;QD=11.73;ReadPosRankSum=-4.840;VQSLOD=1.7426;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:18,0:18:67.54:68,0,148	0/0:14,0:14:11.85:0,12,627	0/1:18,0:4:0.39:0,0,24	0/1:19,0:12:28.93:29,0,35	0/1:16,0:16:99:102,0,343	1/1:13,0:13:32.97:363,33,0	1/1:25,0:25:46.37:379,46,0	1/1:27,0:22:42.96:392,43,0	1/1:18,0:18:44.87:469,45,0	1/1:19,0:18:50.88:435,51,0	1/1:15,0:15:2.80:13,3,0	1/1:26,0:26:53.44:531,53,0	1/1:22,0:22:45.80:477,46,0	0/1:22,0:22:99:109,0,349	1/1:22,0:22:11.96:164,12,0	0/1:25,0:25:86.97:87,0,122	0/1:23,0:23:8.13:8,0,335	1/1:15,0:14:32.65:231,33,0	1/1:11,0:11:26.16:185,26,0	1/1:3,16:19:5.97:56,6,0	1/1:17,1:17:26.90:210,27,0	1/1:19,0:19:17.96:222,18,0	1/1:19,0:19:23.72:259,24,0	1/1:19,0:19:23.93:204,24,0	1/1:25,0:25:6.02:95,6,0	1/1:12,0:12:29.81:243,30,0	1/1:16,0:16:44.44:375,44,0	1/1:19,0:19:50.76:391,51,0
chr10	41771603	.	CACAT	C	5803.32	PASS	AB=0.992;AC=47;AF=0.839;AN=56;BaseQRankSum=-0.328;DP=539;FS=3.003;HRun=0;HaplotypeScore=142.0694;InbreedingCoeff=0.1255;MQ=49.47;MQ0=13;MQRankSum=-2.512;QD=11.05;ReadPosRankSum=-4.685;VQSLOD=3.0971;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:17,0:17:67.56:68,0,75	0/0:14,0:14:11.45:0,11,432	0/1:17,0:4:0.39:0,0,24	0/1:20,0:12:26.35:26,0,42	0/1:16,0:16:99:105,0,170	1/1:15,0:15:35.95:318,36,0	1/1:24,0:24:45.38:334,45,0	1/1:28,0:23:46.88:427,47,0	1/1:18,0:18:44.85:386,45,0	1/1:20,0:19:53.56:446,54,0	1/1:1,14:15:3.01:57,3,0	1/1:25,0:25:53.58:449,54,0	1/1:23,0:23:51.77:443,52,0	0/1:22,0:22:99:116,0,137	1/1:21,0:21:11.95:122,12,0	0/1:25,0:25:34.36:132,0,34	0/1:24,0:24:11.94:12,0,160	1/1:17,0:16:35.64:255,36,0	1/1:10,0:10:26.16:186,26,0	1/1:17,0:17:5.90:37,6,0	1/1:18,0:17:26.90:210,27,0	1/1:20,0:20:20.94:189,21,0	1/1:19,0:19:23.81:204,24,0	1/1:19,0:19:23.92:190,24,0	1/1:25,0:25:6.02:67,6,0	1/1:13,0:13:32.93:274,33,0	1/1:16,0:16:44.42:337,44,0	1/1:20,0:20:53.75:414,54,0
chr10	41771607	.	TACACACACAC	T	4954.21	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=2.407;DP=551;FS=4.790;HRun=0;HaplotypeScore=188.7600;InbreedingCoeff=0.6821;MQ=49.08;MQ0=13;MQRankSum=-5.213;QD=20.06;ReadPosRankSum=0.173;VQSLOD=3.7739;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:14.53:0,15,530	0/0:14,0:14:27.56:0,28,1120	0/0:16,0:3:3.01:0,3,40	0/0:21,0:11:11.83:0,12,103	0/0:18,0:18:28.32:0,28,1031	1/1:10,5:15:25.55:515,26,0	1/1:19,3:23:35.11:544,35,0	0/0:29,0:24:24.65:0,25,170	1/1:14,6:20:9.30:720,9,0	0/0:22,0:20:30.43:0,30,362	0/0:14,0:14:3.01:0,3,64	1/1:18,6:26:31.24:902,31,0	1/1:18,6:24:45.13:883,45,0	0/0:22,0:22:34.52:0,35,1225	0/1:22,0:22:25.02:102,0,25	0/0:24,0:24:25.80:0,26,678	0/0:26,0:26:25.69:0,26,880	0/1:17,0:16:10.78:11,0,68	0/0:9,0:9:7.58:0,8,115	0/0:16,0:16:5.95:0,6,67	0/0:19,0:18:13.42:0,13,164	1/1:16,4:20:24.08:520,24,0	1/1:15,4:19:20.76:462,21,0	1/1:19,0:20:14.99:254,15,0	1/1:26,0:26:6.30:36,6,0	0/0:14,0:13:14.98:0,15,216	0/1:15,0:15:4.77:5,0,152	0/0:22,0:22:27.54:0,28,404
chr10	41771609	.	C	CAT	72.13	PASS	AB=0.818;AC=2;AF=0.036;AN=56;BaseQRankSum=-0.864;DP=561;FS=7.671;HRun=0;HaplotypeScore=154.2648;InbreedingCoeff=-0.0324;MQ=49.23;MQ0=13;MQRankSum=1.804;QD=1.72;ReadPosRankSum=2.116;VQSLOD=2.1348;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:12.13:0,12,166	0/0:14,0:14:36.02:0,36,410	0/1:14,0:3:0.83:1,0,23	0/0:19,0:9:21.02:0,21,174	0/0:16,0:16:35.95:0,36,312	0/0:16,0:16:39.28:0,39,266	0/0:23,0:23:44:0,44,301	0/0:30,0:25:65.92:0,66,467	0/0:20,0:20:47.08:0,47,313	0/0:21,0:19:50.88:0,51,439	0/0:14,0:14:2.92:0,3,17	0/0:27,0:27:64.94:0,65,462	0/0:25,0:25:56.69:0,57,399	0/0:23,0:23:47.43:0,47,456	0/0:23,0:23:14.54:0,15,87	0/0:24,0:24:33.45:0,33,235	0/1:12,15:28:72.21:146,0,72	0/0:18,0:17:33.10:0,33,241	0/0:10,0:10:23.61:0,24,159	0/0:16,0:16:5.88:0,6,36	0/0:21,0:20:29.91:0,30,236	0/0:24,0:24:20.97:0,21,128	0/0:20,0:20:26.29:0,26,166	0/0:20,0:20:27.22:0,27,200	0/0:26,0:26:5.86:0,6,35	0/0:14,0:13:33.69:0,34,268	0/0:15,0:15:41.46:0,41,302	0/0:22,0:22:53.75:0,54,414
chr10	41772017	.	GCACACACACA	G	7001.56	PASS	AB=0.646;AC=34;AF=0.630;AN=54;BaseQRankSum=-1.094;DP=483;FS=22.976;HRun=0;HaplotypeScore=183.7731;InbreedingCoeff=0.6913;MQ=48.73;MQ0=12;MQRankSum=-2.737;QD=22.30;ReadPosRankSum=1.356;VQSLOD=2.7303;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,29:33:20.71:643,21,0	0/0:13,0:14:39.11:0,39,1733	0/0:16,0:4:3.48:0,3,106	./.	1/1:12,15:27:6.49:185,6,0	0/0:4,0:20:21.74:0,22,99	0/0:10,0:24:17.07:0,17,292	0/1:12,9:21:99:599,0,195	0/0:7,0:19:24.44:0,24,129	1/1:7,12:19:33.09:880,33,0	1/1:9,9:18:12.04:368,12,0	0/1:5,0:16:6.86:7,0,188	0/0:4,0:8:11.05:0,11,79	1/1:7,10:17:6.02:184,6,0	1/1:2,12:14:15.05:460,15,0	1/1:4,8:12:9.03:276,9,0	1/1:3,0:16:21.04:207,21,0	1/1:6,10:16:18.06:552,18,0	1/1:8,3:10:9.03:236,9,0	1/1:6,12:18:15.05:426,15,0	1/1:13,9:22:3.01:92,3,0	0/0:3,0:14:5.83:0,6,22	0/0:7,0:14:11.36:0,11,96	0/0:9,0:24:21.76:0,22,117	1/1:3,12:14:6.02:184,6,0	1/1:10,13:23:36.06:965,36,0	1/1:0,9:9:15.05:460,15,0	1/1:3,4:7:9.03:276,9,0
chr10	41773680	.	C	CT	4562.61	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-13.228;DP=672;FS=0.389;HRun=1;HaplotypeScore=60.3905;InbreedingCoeff=1.0000;MQ=95.99;MQ0=0;MQRankSum=-4.161;QD=41.48;ReadPosRankSum=2.345;VQSLOD=5.3575;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:57.19:0,57,739	0/0:14,0:14:39.13:0,39,506	0/0:36,0:36:99:0,102,1289	0/0:30,0:29:61.31:0,61,930	0/0:19,0:19:57.19:0,57,740	0/0:29,0:29:87.28:0,87,1128	0/0:16,0:16:48.14:0,48,608	0/0:37,0:37:99:0,111,1430	0/0:22,0:22:63.20:0,63,818	1/1:2,28:30:84.25:1235,84,0	1/1:1,14:15:42.14:629,42,0	0/0:21,0:21:63.18:0,63,790	0/0:18,0:18:54.18:0,54,701	0/0:30,0:30:90.28:0,90,1155	1/1:0,18:18:54.18:810,54,0	0/0:27,0:27:81.26:0,81,1051	0/0:18,0:18:48.16:0,48,623	1/1:0,17:17:42.14:630,42,0	0/0:23,0:23:60.19:0,60,779	0/0:29,0:29:87.28:0,87,1130	0/0:21,0:21:63.20:0,63,817	0/0:26,0:26:78.25:0,78,1011	0/0:24,0:24:66.18:0,66,828	0/0:21,0:21:60.19:0,60,779	1/1:0,30:30:84.28:1259,84,0	0/0:28,0:28:81.24:0,81,1024	0/0:34,0:34:99:0,102,1292	0/0:19,0:19:57.19:0,57,740
chr10	41774565	.	AG	A	3520.91	PASS	AB=0.902;AC=39;AF=0.696;AN=56;BaseQRankSum=-2.830;DP=516;FS=9.176;HRun=11;HaplotypeScore=81.0380;InbreedingCoeff=0.0186;MQ=74.40;MQ0=0;MQRankSum=0.528;QD=7.07;ReadPosRankSum=5.847;VQSLOD=1.3229;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:22:6.74:7,0,72	0/1:9,2:11:23.02:40,0,23	0/1:19,1:20:35.06:35,0,159	0/1:19,0:19:4.38:4,0,102	0/1:15,2:18:37.95:38,0,79	1/1:5,7:13:20:153,20,0	1/1:9,15:24:49.87:396,50,0	0/1:17,2:20:38.05:38,0,79	1/1:6,8:14:20.96:172,21,0	1/1:9,8:16:29.91:243,30,0	1/1:12,0:14:16.04:107,16,0	1/1:9,9:20:25.02:184,25,0	1/1:11,13:27:36.73:285,37,0	0/1:26,5:31:36.98:37,0,232	1/1:8,13:24:32.86:239,33,0	0/0:12,0:12:17.48:0,17,130	0/1:22,0:22:8.65:9,0,230	1/1:3,19:25:42.02:313,42,0	0/1:10,2:12:9.55:10,0,102	0/1:11,2:13:37.28:37,0,42	0/1:19,6:24:90.39:90,0,147	1/1:8,1:10:8.02:55,8,0	1/1:5,10:16:32:252,32,0	1/1:4,26:34:71.05:541,71,0	1/1:11,7:19:28.80:227,29,0	0/1:13,0:14:9.47:9,0,103	0/1:12,2:13:0.60:1,0,192	0/0:4,0:6:8.86:0,9,78
chr10	41777073	.	GCCCAC	G	7869.38	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=13.645;DP=616;FS=5.121;HRun=0;HaplotypeScore=119.4993;InbreedingCoeff=0.9994;MQ=77.80;MQ0=0;MQRankSum=-5.397;QD=52.81;ReadPosRankSum=3.129;VQSLOD=5.1527;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,129,4035	0/0:11,0:11:33.11:0,33,1026	0/0:26,0:27:71.36:0,71,1722	0/0:20,0:18:46.91:0,47,1250	0/0:21,0:21:63.22:0,63,1955	1/1:1,12:13:24.08:521,24,0	1/1:3,13:16:33.11:715,33,0	0/0:24,0:24:72.25:0,72,2245	1/1:1,23:24:66.23:1432,66,0	0/0:19,0:19:48.16:0,48,1355	0/0:27,0:27:78.27:0,78,2453	1/1:1,21:22:57.20:1237,57,0	1/1:0,27:27:69.24:1498,69,0	0/0:18,0:18:54.19:0,54,1710	0/0:24,0:24:72.25:0,72,2284	0/0:27,0:27:81.28:0,81,2569	0/0:26,0:26:78.27:0,78,2452	0/0:21,0:21:63.22:0,63,1998	0/0:28,0:28:84.26:0,84,2475	0/0:23,0:23:69.24:0,69,2136	0/0:23,0:23:66.23:0,66,2024	1/1:0,13:13:30.10:651,30,0	1/1:1,17:18:48.16:1032,48,0	1/1:0,16:16:36.59:782,37,0	0/0:19,0:19:54.19:0,54,1712	0/0:25,0:25:75.26:0,75,2249	0/0:30,0:30:90.31:0,90,2820	0/0:11,0:11:33.11:0,33,1045
chr10	41777943	.	T	TG	21351.37	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=8.740;DP=814;FS=0.000;HRun=0;HaplotypeScore=101.7809;InbreedingCoeff=0.9999;MQ=83.87;MQ0=0;MQRankSum=-3.675;QD=43.40;ReadPosRankSum=-0.303;VQSLOD=4.4102;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,43:44:99:1870,117,0	0/0:13,0:13:39.13:0,39,545	0/0:22,0:22:66.19:0,66,863	0/0:24,0:24:58.55:0,59,762	1/1:1,32:33:84.29:1336,84,0	0/0:36,0:36:99:0,102,1424	0/0:28,0:28:78.25:0,78,1075	1/1:1,47:48:99:2185,141,0	0/0:28,0:28:84.27:0,84,1159	1/1:2,30:32:93.27:1453,93,0	1/1:0,19:19:48.16:765,48,0	0/0:24,0:24:72.23:0,72,990	0/0:27,0:27:78.24:0,78,1057	0/0:29,0:29:84.27:0,84,1158	1/1:0,43:43:99:1774,111,0	1/1:1,28:29:81.28:1293,81,0	1/1:0,13:13:39.13:623,39,0	1/1:0,13:13:33.11:527,33,0	1/1:2,23:25:72.25:1145,72,0	1/1:0,42:42:99:1905,120,0	1/1:1,31:32:90.31:1439,90,0	0/0:33,0:33:96.32:0,96,1337	0/0:31,0:31:84.28:0,84,1174	0/0:27,0:27:81.27:0,81,1132	1/1:1,26:27:72.18:1121,72,0	1/1:1,34:35:99:1568,105,0	1/1:0,44:45:99:1869,117,0	1/1:0,12:12:30.10:479,30,0
chr10	41779258	.	ATGTGTGTGTG	A	10607.72	PASS	AB=0.672;AC=30;AF=0.536;AN=56;BaseQRankSum=-4.873;DP=894;FS=4.103;HRun=0;HaplotypeScore=322.9383;InbreedingCoeff=0.1709;MQ=56.19;MQ0=6;MQRankSum=-3.590;QD=15.86;ReadPosRankSum=0.149;VQSLOD=2.9807;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:11,31:43:33.09:950,33,0	0/0:9,0:12:21.03:0,21,694	0/0:41,0:27:24.47:0,24,366	0/0:31,0:15:3.80:0,4,330	1/1:8,23:31:21.04:489,21,0	0/1:11,0:23:10.19:10,0,54	0/0:9,0:22:21.77:0,22,224	0/1:26,0:26:28.18:28,0,178	0/0:14,0:43:31.13:0,31,282	1/1:14,32:48:97.86:2499,98,0	1/1:6,12:18:18.04:450,18,0	0/0:10,0:44:29.95:0,30,219	0/1:10,1:41:33.04:33,0,179	0/1:9,0:42:10.26:10,0,129	1/1:10,34:45:51.31:1859,51,0	1/1:6,25:32:50.93:1491,51,0	0/1:11,0:17:23.48:23,0,54	0/1:13,12:24:99:251,0,168	0/1:7,0:20:99:103,0,156	1/1:10,1:29:36.04:400,36,0	0/1:25,0:50:35.03:42,0,35	0/1:10,0:36:2.61:3,0,166	0/1:11,0:22:4.90:5,0,107	0/0:12,0:32:18.60:0,19,100	1/1:7,32:40:34:968,34,0	0/1:7,2:30:55.65:589,0,56	1/1:12,0:34:32.67:319,33,0	0/1:10,1:12:31.17:85,0,31
chr10	41781874	.	AAAAAAC	A	8075.76	PASS	AB=1.000;AC=22;AF=0.393;AN=56;BaseQRankSum=-0.053;DP=541;FS=7.260;HRun=0;HaplotypeScore=203.1988;InbreedingCoeff=0.8284;MQ=66.49;MQ0=0;MQRankSum=1.431;QD=33.79;ReadPosRankSum=6.769;VQSLOD=3.5819;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:18,6:24:63.12:1139,63,0	0/0:14,0:14:42.13:0,42,1068	0/0:19,0:13:22.43:0,22,232	0/0:18,0:14:0.38:0,0,228	1/1:23,7:30:78.01:1322,78,0	0/0:26,0:25:57.51:0,58,1036	0/0:14,0:14:38.57:0,39,609	1/1:21,0:21:32.38:650,32,0	0/0:17,0:16:27.76:0,28,435	0/0:26,0:26:8.55:0,9,413	0/1:26,0:26:0.17:0,0,381	0/0:11,0:11:20.82:0,21,289	0/0:26,0:26:66.13:0,66,945	0/0:18,0:18:31.75:0,32,396	0/1:20,0:20:14.27:14,0,455	1/1:10,1:11:26.54:538,27,0	0/0:20,0:20:12.13:0,12,292	0/0:12,0:12:20.71:0,21,229	1/1:14,4:18:48.04:872,48,0	1/1:15,10:25:70.99:1167,71,0	1/1:11,1:12:21.90:314,22,0	0/0:25,0:25:54.15:0,54,908	0/0:26,0:26:67.28:0,67,1014	0/0:10,0:10:18.01:0,18,283	0/0:20,0:19:29.33:0,29,437	1/1:19,7:26:55.82:955,56,0	1/1:12,11:23:54.13:1024,54,0	1/1:3,0:3:9:79,9,0
chr10	41781875	.	AAAAAC	A	5475.24	PASS	AB=1.000;AC=22;AF=0.393;AN=56;BaseQRankSum=2.431;DP=540;FS=7.097;HRun=0;HaplotypeScore=202.9295;InbreedingCoeff=0.7964;MQ=65.07;MQ0=0;MQRankSum=0.866;QD=23.40;ReadPosRankSum=5.263;VQSLOD=3.4013;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:23:63.11:822,63,0	0/0:14,0:14:42.12:0,42,942	0/0:18,0:12:17.21:0,17,225	0/0:17,0:13:11.81:0,12,213	1/1:27,2:29:76.58:910,77,0	0/0:26,0:25:64.18:0,64,963	0/0:15,0:15:41.50:0,42,585	1/1:19,1:20:33.17:486,33,0	0/0:17,0:16:27.68:0,28,389	0/0:29,0:29:10.18:0,10,311	0/1:26,0:26:46.50:47,0,246	0/0:11,0:11:7.23:0,7,308	0/0:26,0:26:66.10:0,66,807	0/0:17,0:17:32.11:0,32,335	0/1:21,0:20:26.74:27,0,359	1/1:11,0:11:5.46:331,5,0	0/0:20,0:20:17.16:0,17,440	0/0:12,0:12:17.61:0,18,167	1/1:18,0:18:45.80:557,46,0	1/1:24,1:25:67.92:758,68,0	1/1:11,1:12:21.06:205,21,0	0/0:25,0:25:55.83:0,56,803	0/0:28,0:28:51.32:0,51,871	0/0:9,0:9:18.04:0,18,250	0/0:22,0:21:34.90:0,35,360	1/1:24,0:24:52.44:596,52,0	1/1:22,0:22:53.11:657,53,0	1/1:3,0:3:9:79,9,0
chr10	41781878	.	AAC	A	4747.40	PASS	AB=1.000;AC=31;AF=0.554;AN=56;BaseQRankSum=5.876;DP=536;FS=1.574;HRun=0;HaplotypeScore=179.4883;InbreedingCoeff=0.8318;MQ=63.04;MQ0=1;MQRankSum=-3.667;QD=14.79;ReadPosRankSum=-1.000;VQSLOD=4.6831;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:21:61.12:423,61,0	0/0:15,0:15:45.09:0,45,588	0/0:17,0:11:20.91:0,21,193	0/0:16,0:12:9.32:0,9,167	1/1:29,0:29:74.66:520,75,0	0/0:26,0:25:45.33:0,45,472	0/0:14,0:14:37.81:0,38,341	1/1:22,0:22:40.43:344,40,0	0/0:17,0:16:7.80:0,8,167	1/1:27,1:28:36.32:346,36,0	1/1:27,2:29:63.39:488,63,0	0/0:11,0:11:5.01:0,5,145	0/0:27,0:27:1.91:0,2,238	0/0:16,0:16:10.47:0,10,173	1/1:19,0:18:22.46:199,22,0	1/1:13,0:13:28.38:254,28,0	0/0:23,0:23:17.77:0,18,377	1/1:12,0:12:16.43:132,16,0	1/1:17,0:17:46:332,46,0	1/1:25,0:25:65.17:466,65,0	1/1:9,0:9:19.74:145,20,0	0/0:23,0:23:17.22:0,17,298	0/1:28,0:28:18.32:18,0,261	0/0:10,0:10:12.15:0,12,123	1/1:20,2:21:8.92:216,9,0	1/1:24,0:24:58.36:408,58,0	1/1:19,0:19:52.30:377,52,0	1/1:4,0:3:9:79,9,0
chr10	41781879	.	AC	A	6122.78	PASS	AB=0.964;AC=37;AF=0.661;AN=56;BaseQRankSum=7.640;DP=527;FS=15.461;HRun=1;HaplotypeScore=164.3734;InbreedingCoeff=0.4818;MQ=63.00;MQ0=1;MQRankSum=-7.546;QD=14.65;ReadPosRankSum=-1.055;VQSLOD=3.1023;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:21:62.19:428,62,0	0/0:15,0:15:45.05:0,45,467	0/0:17,0:11:15.80:0,16,151	0/0:16,0:12:7.97:0,8,142	1/1:28,0:28:79.10:579,79,0	0/0:25,0:24:30.43:0,30,311	0/0:14,0:14:8.28:0,8,202	1/1:20,0:20:49.65:399,50,0	0/1:16,2:17:23.20:23,0,93	1/1:21,4:25:57.64:512,58,0	1/1:20,9:29:74.59:678,75,0	0/1:11,0:11:7.39:7,0,72	0/1:26,1:27:98.60:99,0,112	0/1:16,0:16:4.04:4,0,131	1/1:13,6:18:51.54:432,52,0	1/1:12,1:13:35.54:282,36,0	0/0:21,1:22:9.25:0,9,230	1/1:10,1:12:27.66:210,28,0	1/1:17,1:18:47.67:364,48,0	1/1:22,3:25:73.53:524,74,0	1/1:8,0:8:20.82:156,21,0	0/1:21,2:23:6.76:7,0,193	0/1:28,1:29:58.20:58,0,142	0/1:10,0:10:3.71:4,0,67	1/1:18,4:21:44.86:419,45,0	1/1:19,2:21:62.39:478,62,0	1/1:18,1:19:56.26:381,56,0	1/1:4,0:3:9:80,9,0
chr10	41781880	.	C	CA	2434.45	PASS	AB=0.981;AC=36;AF=0.643;AN=56;BaseQRankSum=-1.004;DP=571;FS=0.994;HRun=10;HaplotypeScore=207.0095;InbreedingCoeff=0.1544;MQ=60.70;MQ0=2;MQRankSum=-0.102;QD=4.90;ReadPosRankSum=-0.617;VQSLOD=-0.3849;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:25:36.76:323,37,0	0/0:15,0:15:35.95:0,36,295	0/1:17,0:11:6.96:7,0,64	0/1:16,0:12:15.97:24,0,16	1/1:32,0:33:20.49:297,20,0	0/1:22,3:24:37.62:156,0,38	0/1:12,2:14:49:49,0,49	1/1:22,0:22:20.63:193,21,0	0/1:18,0:17:1.80:2,0,2	0/1:25,0:25:9.60:10,0,30	0/1:31,0:31:15.44:15,0,24	1/1:11,0:11:2.51:6,3,0	0/0:24,0:24:6.94:0,7,28	0/0:16,0:16:7.93:0,8,28	0/0:19,0:18:6.76:0,7,17	1/1:13,0:13:18.50:116,19,0	1/1:22,1:24:39.36:208,39,0	1/1:12,0:12:0.36:6,0,0	1/1:20,0:20:24.16:179,24,0	0/1:30,0:29:12.86:239,0,13	1/1:11,0:11:14.80:101,15,0	1/1:22,1:23:0.52:42,1,0	0/1:30,0:30:15.59:16,0,31	0/1:10,0:10:1.19:1,0,1	0/1:24,0:23:4.58:5,0,39	1/1:27,0:27:25.37:266,25,0	1/1:30,0:30:39.97:340,40,0	0/1:6,0:5:0:0,0,0
chr10	41781883	.	A	AAC	1547.07	PASS	AB=1.000;AC=14;AF=0.250;AN=56;BaseQRankSum=1.803;DP=582;FS=0.000;HRun=0;HaplotypeScore=227.7891;InbreedingCoeff=0.2124;MQ=58.10;MQ0=3;MQRankSum=3.263;QD=5.97;ReadPosRankSum=4.128;VQSLOD=3.0457;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:24,1:25:18.18:204,18,0	0/0:14,0:14:42.12:0,42,602	0/0:18,0:11:2.46:0,2,171	0/0:13,0:9:13.45:0,13,113	0/1:38,0:38:76.95:141,0,77	0/0:26,0:25:58.41:0,58,506	0/0:16,0:16:37.34:0,37,329	0/1:25,0:24:80.95:81,0,121	0/0:17,0:16:29.66:0,30,237	0/0:26,0:26:68.75:0,69,593	0/0:31,0:31:65.33:0,65,556	0/1:11,0:11:14.40:14,0,85	0/0:23,0:23:62.66:0,63,515	0/0:15,0:15:29.72:0,30,239	0/0:20,0:19:56.52:0,57,408	0/1:13,0:13:28.20:86,0,28	1/1:17,7:24:59.39:663,59,0	0/0:12,0:12:29.42:0,29,208	0/1:22,0:21:69.07:121,0,69	0/1:33,0:32:99:115,0,136	1/1:10,0:10:14.34:74,14,0	0/0:22,0:22:59.70:0,60,505	0/0:32,0:32:53.95:0,54,538	0/0:10,0:10:20.82:0,21,173	0/0:25,0:24:56.75:0,57,498	0/1:27,0:27:99:117,0,105	0/1:31,0:31:58.24:99,0,58	0/0:3,0:2:0:0,0,0
chr10	41781884	.	A	AC	3836.43	PASS	AB=0.846;AC=13;AF=0.232;AN=56;BaseQRankSum=-0.977;DP=584;FS=1.139;HRun=0;HaplotypeScore=200.5920;InbreedingCoeff=-0.1072;MQ=56.87;MQ0=3;MQRankSum=3.409;QD=13.90;ReadPosRankSum=8.185;VQSLOD=4.3792;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:13,11:25:19.93:524,20,0	0/0:14,0:14:42.12:0,42,554	0/0:18,0:11:7.52:0,8,165	0/1:12,0:8:3.05:3,0,87	0/1:26,12:38:50.38:636,0,50	0/0:26,0:25:29.05:0,29,449	0/0:16,0:16:25.65:0,26,315	0/1:14,8:22:99:342,0,118	0/0:16,0:15:16.89:0,17,222	0/0:27,0:27:68.78:0,69,585	0/0:30,0:30:67.05:0,67,535	0/1:11,0:11:24.68:25,0,77	0/0:23,0:23:62.54:0,63,493	0/0:14,0:14:32.76:0,33,255	0/0:20,0:19:56.27:0,56,379	0/1:8,5:13:19.58:261,0,20	0/1:23,1:24:23.47:222,0,23	0/0:11,0:12:19.25:0,19,181	0/1:16,8:23:23.03:406,0,23	0/1:30,4:33:68.02:472,0,68	0/1:10,3:13:25.43:164,0,25	0/0:22,0:22:50.21:0,50,444	0/0:31,0:31:71.37:0,71,629	0/0:10,0:10:20.87:0,21,170	0/0:26,0:25:59.67:0,60,489	0/1:22,6:28:99:420,0,121	0/1:26,5:31:99:361,0,186	0/0:3,0:2:2.98:0,3,21
chr10	41781888	.	AAAC	A	1090.52	PASS	AB=0.985;AC=16;AF=0.286;AN=56;BaseQRankSum=-0.519;DP=583;FS=25.109;HRun=0;HaplotypeScore=235.1066;InbreedingCoeff=0.1463;MQ=52.20;MQ0=4;MQRankSum=-1.136;QD=4.83;ReadPosRankSum=1.213;VQSLOD=1.3903;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:16.27:0,16,133	0/0:13,0:13:39.12:0,39,681	0/1:18,0:10:12.14:12,0,71	0/1:11,0:6:13.30:13,0,34	0/0:40,0:40:73.42:0,73,555	0/1:26,0:25:72.61:128,0,73	0/1:16,0:16:68.18:68,0,137	0/0:27,0:24:41.05:0,41,425	1/1:16,0:15:5.91:125,6,0	0/0:26,0:26:55.24:0,55,597	0/0:29,0:29:7.54:0,8,385	1/1:9,0:9:15.31:69,15,0	0/1:20,0:20:55.96:56,0,90	0/1:13,0:13:34.94:69,0,35	0/0:23,0:21:46.96:0,47,530	0/0:11,0:11:12.66:0,13,79	0/1:20,3:23:43.26:279,0,43	0/1:14,0:14:0.71:1,0,174	0/0:23,0:22:28.48:0,28,222	0/0:37,0:36:41.07:0,41,519	0/0:13,0:13:14.04:0,14,117	1/1:21,0:21:21.87:147,22,0	0/1:30,1:31:3.10:279,0,3	0/1:8,0:8:9.91:10,0,11	0/0:25,0:24:55.72:0,56,547	0/0:29,0:29:51.75:0,52,490	0/0:32,0:32:49.09:0,49,521	0/0:3,0:2:3.01:0,3,38
chr10	41781889	.	AAC	A	1861.32	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=-2.459;DP=584;FS=27.387;HRun=0;HaplotypeScore=222.2657;InbreedingCoeff=0.6962;MQ=51.93;MQ0=4;MQRankSum=-0.699;QD=8.78;ReadPosRankSum=-0.862;VQSLOD=1.5953;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:32.78:0,33,265	0/0:13,0:13:39.12:0,39,582	0/1:17,0:9:17.48:17,0,69	0/1:13,0:6:13.21:13,0,36	0/0:40,0:40:97.52:0,98,660	1/1:26,0:25:11.34:254,11,0	0/1:16,0:16:37.58:75,0,38	0/0:26,0:23:59.92:0,60,475	1/1:15,1:15:15.33:153,15,0	0/0:27,0:27:15.89:0,16,415	0/0:30,0:30:38.31:0,38,341	1/1:8,0:8:20.65:131,21,0	1/1:19,1:20:10.04:149,10,0	1/1:12,1:13:9.68:166,10,0	0/0:23,0:21:39.77:0,40,413	0/0:12,0:12:16.14:0,16,119	1/1:23,0:23:26.36:215,26,0	0/0:15,0:15:6.11:0,6,134	0/0:24,0:23:41.59:0,42,305	0/0:36,0:35:66.26:0,66,550	0/0:13,0:13:8.29:0,8,123	1/1:19,2:21:51.42:359,51,0	1/1:28,3:31:45.41:477,45,0	1/1:8,0:8:11.34:55,11,0	0/0:24,0:23:52.36:0,52,406	0/0:28,0:28:63.51:0,64,536	0/0:32,0:32:74.87:0,75,614	0/0:3,0:2:3.01:0,3,37
chr10	41781890	.	AC	A	3760.72	PASS	AB=0.952;AC=26;AF=0.464;AN=56;BaseQRankSum=-3.443;DP=580;FS=16.351;HRun=1;HaplotypeScore=205.2288;InbreedingCoeff=0.5555;MQ=51.86;MQ0=4;MQRankSum=-0.163;QD=12.33;ReadPosRankSum=0.330;VQSLOD=0.7956;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:43.91:0,44,326	0/0:14,0:14:42.10:0,42,476	0/1:14,2:9:23.42:23,0,59	0/1:13,1:6:13.45:13,0,26	0/0:39,0:39:99:0,104,656	1/1:21,5:25:55.16:493,55,0	1/1:15,1:16:28.52:194,29,0	0/0:26,0:23:62.91:0,63,440	1/1:10,6:15:21.63:289,22,0	0/1:25,2:27:39.41:39,0,302	0/1:30,0:30:5.31:5,0,226	1/1:2,6:8:21:247,21,0	1/1:13,7:20:51.06:464,51,0	1/1:10,3:13:27.36:193,27,0	0/1:22,1:21:35.80:36,0,233	0/0:11,0:11:10.09:0,10,111	1/1:21,1:22:58.58:337,59,0	0/1:15,0:15:17.78:18,0,111	0/0:24,0:23:42.76:0,43,325	0/0:35,0:34:71.82:0,72,548	0/0:13,0:13:18.69:0,19,150	1/1:13,8:21:56.68:591,57,0	1/1:20,10:30:63.84:666,64,0	1/1:2,6:8:14.92:151,15,0	0/0:24,0:23:24.05:0,24,285	0/0:29,0:29:56.18:0,56,491	0/0:30,1:31:82.04:0,82,586	0/0:3,0:2:3.01:0,3,33
chr10	41781910	.	AAC	A	6964.92	PASS	AB=0.997;AC=43;AF=0.768;AN=56;BaseQRankSum=6.823;DP=616;FS=22.459;HRun=0;HaplotypeScore=227.5191;InbreedingCoeff=0.1089;MQ=39.17;MQ0=13;MQRankSum=-7.146;QD=12.22;ReadPosRankSum=8.031;VQSLOD=3.1239;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:25:45.51:323,46,0	0/0:16,0:16:45.13:0,45,710	0/0:30,0:11:7.66:0,8,158	0/1:21,0:4:0.60:1,0,26	0/1:36,0:36:45.10:417,0,45	1/1:23,0:22:39.52:342,40,0	1/1:15,0:15:24.56:250,25,0	0/1:33,0:29:52.86:263,0,53	1/1:15,0:14:32.06:219,32,0	1/1:30,0:29:29.27:388,29,0	0/1:26,0:26:0.78:356,0,1	1/1:10,0:10:2.51:133,3,0	1/1:21,1:22:21.69:332,22,0	1/1:15,0:15:20.67:241,21,0	1/1:22,0:20:3.23:290,3,0	1/1:12,0:12:1.63:142,2,0	1/1:23,1:24:58.09:378,58,0	0/1:12,0:12:24.13:91,0,24	0/1:19,0:18:45.15:167,0,45	0/1:34,0:33:37.60:360,0,38	1/1:15,0:15:15.58:169,16,0	0/1:21,0:21:16.10:238,0,16	1/1:33,0:32:21.39:470,21,0	1/1:9,1:10:14.14:170,14,0	1/1:23,2:24:36.86:373,37,0	0/1:35,1:35:5.21:370,0,5	1/1:30,2:32:26.90:449,27,0	1/1:4,0:3:5.90:36,6,0
chr10	41781912	.	CAA	C	14422.01	PASS	AB=1.000;AC=51;AF=0.911;AN=56;BaseQRankSum=3.410;DP=606;FS=0.000;HRun=8;HaplotypeScore=199.7256;InbreedingCoeff=0.6707;MQ=39.17;MQ0=12;MQRankSum=-4.485;QD=25.89;ReadPosRankSum=2.459;VQSLOD=2.6548;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,17:24:55.01:634,55,0	0/0:16,0:16:48.14:0,48,761	0/0:32,0:11:2.43:0,2,215	0/1:21,0:4:5.27:5,0,40	1/1:11,26:37:78.43:955,78,0	1/1:8,18:25:63.04:703,63,0	1/1:4,11:15:40.94:476,41,0	1/1:9,22:27:56.42:679,56,0	1/1:5,10:14:25.54:369,26,0	1/1:6,24:29:72.95:888,73,0	1/1:7,19:26:54.10:629,54,0	1/1:2,8:10:27.07:312,27,0	1/1:12,11:23:35.10:573,35,0	1/1:4,11:15:35.77:393,36,0	1/1:7,14:19:48.15:575,48,0	1/1:3,8:11:5.63:317,6,0	1/1:5,17:22:55.60:698,56,0	1/1:7,6:13:24.07:280,24,0	1/1:5,13:17:17.80:467,18,0	1/1:4,27:30:67.07:881,67,0	1/1:5,8:13:30.19:314,30,0	1/1:8,12:20:45.09:513,45,0	1/1:10,23:32:77.54:908,78,0	1/1:2,7:9:20.97:226,21,0	1/1:5,19:23:60.18:715,60,0	1/1:9,26:34:75.48:904,75,0	1/1:7,24:31:74.98:933,75,0	1/1:0,3:3:6.02:73,6,0
chr10	41781919	.	AAC	A	7040.94	PASS	AB=0.985;AC=42;AF=0.750;AN=56;BaseQRankSum=9.325;DP=612;FS=10.584;HRun=0;HaplotypeScore=224.2574;InbreedingCoeff=0.1282;MQ=43.78;MQ0=15;MQRankSum=-8.700;QD=13.16;ReadPosRankSum=9.024;VQSLOD=3.0182;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:27:32.41:288,0,32	0/0:15,0:15:45.15:0,45,759	0/0:40,0:17:4.87:0,5,262	0/0:22,0:4:1.80:0,2,60	1/1:32,0:32:9.21:415,9,0	1/1:23,0:22:51.42:354,51,0	0/1:16,1:17:4.31:216,0,4	0/1:32,0:29:99:261,0,113	1/1:15,1:15:8.44:198,8,0	1/1:30,0:29:43.39:444,43,0	1/1:22,0:22:52.85:356,53,0	1/1:9,0:9:23.47:156,23,0	1/1:22,1:23:3.20:287,3,0	1/1:16,0:16:0.77:219,1,0	1/1:20,1:19:13.77:311,14,0	0/1:13,1:13:3.63:150,0,4	1/1:22,0:22:44.07:382,44,0	1/1:10,0:10:6:118,6,0	0/1:23,0:21:99:176,0,104	1/1:29,0:29:49.67:421,50,0	0/1:13,0:16:41.55:115,0,42	0/1:20,0:20:10.50:266,0,11	1/1:29,0:29:73.32:514,73,0	1/1:9,0:9:22.12:171,22,0	1/1:23,0:22:58.56:363,59,0	0/1:36,0:34:1.62:347,0,2	1/1:29,1:30:52.86:478,53,0	1/1:3,0:3:5.90:36,6,0
chr10	41781933	.	AAC	A	9614.34	PASS	AB=1.000;AC=31;AF=0.554;AN=56;BaseQRankSum=1.330;DP=660;FS=30.469;HRun=0;HaplotypeScore=219.1623;InbreedingCoeff=0.4921;MQ=54.21;MQ0=14;MQRankSum=-5.076;QD=21.75;ReadPosRankSum=4.749;VQSLOD=3.8382;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,22:23:65.10:883,65,0	0/0:15,0:15:45.15:0,45,867	0/0:53,0:31:79.25:0,79,1157	0/0:25,0:7:17.90:0,18,220	1/1:0,36:36:93.16:1283,93,0	0/0:23,0:22:5.69:0,6,33	0/1:20,0:20:6.09:6,0,13	1/1:2,36:35:99:1377,101,0	0/1:15,0:14:0.08:4,0,0	0/1:32,0:32:31.50:84,0,32	0/0:23,0:23:3.94:0,4,59	0/1:7,0:7:0.30:1,0,0	0/1:21,0:21:7.81:8,0,8	0/1:18,0:18:6.85:7,0,7	0/0:21,0:19:8.28:0,8,49	1/1:0,17:16:42.14:625,42,0	0/0:22,0:22:8.35:0,8,37	0/0:10,0:10:4.84:0,5,39	1/1:0,31:29:87.12:1085,87,0	1/1:1,35:36:90.83:1319,91,0	1/1:3,16:18:33.07:462,33,0	1/1:23,0:23:4.95:52,5,0	0/1:30,0:30:11.58:12,0,43	1/1:9,0:9:2.06:16,2,0	0/0:26,0:25:6.17:0,6,21	1/1:5,31:34:88.74:1213,89,0	1/1:1,26:27:77.06:1090,77,0	1/1:0,2:2:6.02:89,6,0
chr10	41781934	.	AC	A	11637.21	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=6.621;DP=657;FS=5.276;HRun=4;HaplotypeScore=200.7242;InbreedingCoeff=0.9572;MQ=55.54;MQ0=14;MQRankSum=-8.083;QD=20.74;ReadPosRankSum=3.914;VQSLOD=3.2526;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:24,1:23:62.84:338,63,0	0/0:16,0:16:48.15:0,48,634	0/0:54,0:32:83.06:0,83,847	0/0:24,1:8:20.86:0,21,194	1/1:36,0:36:86:463,86,0	1/1:3,19:21:51.10:590,51,0	1/1:2,17:19:48.10:554,48,0	1/1:38,0:35:97.36:564,97,0	1/1:2,13:14:35.98:407,36,0	1/1:5,27:32:89.99:976,90,0	1/1:5,18:23:53.85:563,54,0	1/1:1,7:8:23.97:266,24,0	1/1:4,16:20:53.87:571,54,0	1/1:3,15:18:41.88:459,42,0	1/1:6,14:18:44.98:485,45,0	1/1:17,0:16:40.61:219,41,0	1/1:2,19:22:55.61:610,56,0	1/1:3,7:10:21.04:236,21,0	1/1:31,0:29:82.42:530,82,0	1/1:36,0:36:79.27:486,79,0	1/1:19,0:18:31.90:174,32,0	1/1:2,20:22:56.97:621,57,0	1/1:4,25:29:75.06:839,75,0	1/1:3,6:9:20.96:229,21,0	1/1:7,18:25:54.06:608,54,0	1/1:36,0:34:81.03:447,81,0	1/1:26,0:26:70.45:368,70,0	1/1:2,0:2:5.81:31,6,0
chr10	41782413	.	AC	A	10282.87	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=17.662;DP=727;FS=0.284;HRun=1;HaplotypeScore=182.3663;InbreedingCoeff=0.9968;MQ=77.22;MQ0=0;MQRankSum=-4.348;QD=39.40;ReadPosRankSum=4.312;VQSLOD=4.2424;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,160,2542	0/0:11,0:11:33.11:0,33,527	0/0:21,0:21:14.01:0,14,750	0/0:12,0:12:36.04:0,36,544	0/0:31,0:31:75.26:0,75,1191	1/1:0,19:19:54.14:733,54,0	1/1:0,26:26:72.24:1007,72,0	0/0:36,0:36:99:0,102,1630	1/1:0,26:26:75.25:1049,75,0	0/0:40,0:40:99:0,117,1769	0/0:20,0:20:57.16:0,57,877	1/1:2,28:30:84.26:1144,84,0	1/1:0,34:34:99:1405,102,0	1/1:0,30:30:87.29:1216,87,0	0/0:30,0:30:75.26:0,75,1199	0/0:26,0:26:72.23:0,72,1127	1/1:0,24:24:72.24:1006,72,0	0/0:10,0:10:30.10:0,30,473	0/0:29,0:29:87.28:0,87,1367	0/0:27,0:27:69.22:0,69,1078	0/0:22,0:22:66.20:0,66,1028	1/1:0,29:29:87.16:1150,87,0	1/1:1,17:18:48.12:650,48,0	1/1:0,25:25:66.22:923,66,0	0/0:33,0:33:96.33:0,96,1531	0/0:30,0:30:90.31:0,90,1429	0/0:22,0:22:63.21:0,63,999	0/0:11,0:11:30.10:0,30,480
chr10	41782489	.	C	CATA	18264.85	PASS	AB=1.000;AC=45;AF=0.804;AN=56;BaseQRankSum=7.005;DP=646;FS=2.849;HRun=0;HaplotypeScore=161.0898;InbreedingCoeff=0.4433;MQ=70.15;MQ0=0;MQRankSum=-5.636;QD=29.65;ReadPosRankSum=9.606;VQSLOD=4.3742;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:35,0:35:99:389,0,125	0/0:7,0:7:21.03:0,21,337	0/0:9,0:9:23.93:0,24,336	0/0:14,0:14:38.67:0,39,546	1/1:30,0:30:33.29:440,33,0	1/1:3,19:22:63.13:1299,63,0	1/1:2,13:16:33.11:701,33,0	0/1:45,0:44:99:479,0,300	1/1:4,13:17:51.09:994,51,0	0/1:33,0:33:6.01:392,0,6	1/1:26,0:26:40.41:497,40,0	1/1:3,24:27:69.05:1340,69,0	1/1:4,27:31:87.28:1764,87,0	1/1:4,18:22:66.19:1260,66,0	1/1:31,0:31:53.76:508,54,0	1/1:22,0:22:17.06:437,17,0	1/1:6,19:25:63.13:1301,63,0	1/1:8,0:8:20.70:141,21,0	0/1:25,0:25:44.15:391,0,44	1/1:23,0:23:31.36:414,31,0	0/1:7,0:7:6.21:87,0,6	1/1:5,21:26:75.11:1488,75,0	1/1:4,26:30:81.25:1677,81,0	1/1:3,12:15:35.91:659,36,0	1/1:32,0:32:38.64:521,39,0	1/1:29,0:29:58.88:427,59,0	1/1:28,0:27:5.55:456,6,0	1/1:11,0:11:29.61:203,30,0
chr10	41782491	.	G	GAAT	35817.16	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-2.534;DP=687;FS=3.063;HRun=0;HaplotypeScore=115.0106;InbreedingCoeff=0.9828;MQ=68.46;MQ0=0;MQRankSum=-5.529;QD=54.43;ReadPosRankSum=2.038;VQSLOD=7.1151;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,29:38:84.07:1725,84,0	0/0:7,0:7:18.06:0,18,300	0/0:8,0:8:14.36:0,14,246	0/0:14,0:14:27.05:0,27,394	1/1:2,29:34:83.58:1603,84,0	1/1:22,0:22:66.12:1337,66,0	1/1:17,0:17:42.01:764,42,0	1/1:10,36:46:99:2323,114,0	1/1:18,0:18:51.17:1058,51,0	1/1:3,31:35:99:2175,99,0	1/1:1,23:26:66.14:1441,66,0	1/1:27,0:27:72.17:1418,72,0	1/1:30,0:30:90.29:1838,90,0	1/1:22,0:22:63.14:1235,63,0	1/1:3,30:33:84.15:1774,84,0	1/1:1,21:22:63.22:1426,63,0	1/1:26,0:26:69.18:1432,69,0	1/1:4,6:10:21.07:475,21,0	1/1:3,23:27:78.23:1654,78,0	1/1:3,22:26:75.07:1463,75,0	1/1:1,6:7:15.05:340,15,0	1/1:29,0:29:84.02:1580,84,0	1/1:34,0:34:90.09:1734,90,0	1/1:16,0:16:35.92:678,36,0	1/1:2,30:33:84.29:1902,84,0	1/1:3,28:33:96.30:2031,96,0	1/1:4,26:32:81.17:1731,81,0	1/1:0,13:13:30.10:680,30,0
chr10	41783535	.	A	AAT	2910.93	PASS	AC=16;AF=0.381;AN=42;BaseQRankSum=4.147;DP=285;FS=1.208;HRun=0;HaplotypeScore=68.0278;InbreedingCoeff=0.8770;MQ=69.43;MQ0=1;MQRankSum=-5.264;QD=27.99;ReadPosRankSum=-0.826;VQSLOD=4.0195;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,0:6:2.90:44,3,0	0/0:10,0:10:21.06:0,21,252	0/0:12,0:10:11.78:0,12,96	0/0:11,0:7:5.26:0,5,103	./.	0/0:15,0:15:39.11:0,39,476	0/0:10,0:10:15.05:0,15,188	1/1:8,0:8:8.92:76,9,0	0/0:11,0:11:21.05:0,21,250	1/1:7,18:26:60.20:969,60,0	1/1:2,18:20:48.16:791,48,0	0/0:9,0:9:15.05:0,15,188	0/0:18,0:18:42.12:0,42,511	0/0:13,0:13:21.07:0,21,263	1/1:6,9:15:24.08:396,24,0	./.	0/0:22,0:22:57.18:0,57,711	1/1:1,4:5:12.04:188,12,0	./.	./.	./.	0/0:9,0:9:15.05:0,15,187	0/0:15,0:15:39.12:0,39,487	0/0:10,0:10:12.03:0,12,138	1/1:8,12:20:15.40:568,15,0	./.	1/1:4,0:4:5.99:50,6,0	./.
chr10	41783556	.	AGTGT	A	1643.56	PASS	AB=0.762;AC=25;AF=0.735;AN=34;BaseQRankSum=2.491;DP=263;FS=12.166;HRun=0;HaplotypeScore=90.9169;InbreedingCoeff=0.6474;MQ=53.47;MQ0=8;MQRankSum=-1.572;QD=10.40;ReadPosRankSum=3.275;VQSLOD=1.9455;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	0/0:10,0:10:18.06:0,18,429	./.	0/0:25,0:9:11.99:0,12,233	./.	0/1:11,3:15:63.84:99,0,64	0/0:7,0:15:16.65:0,17,78	./.	1/1:3,4:8:6.01:75,6,0	1/1:11,0:17:18.02:168,18,0	1/1:11,0:14:6.01:56,6,0	1/1:8,4:12:8.61:142,9,0	1/1:13,4:18:17.89:265,18,0	1/1:7,7:15:12.03:169,12,0	1/1:2,0:6:12.01:112,12,0	./.	0/0:25,0:25:23.88:0,24,360	1/1:3,0:3:3:28,3,0	./.	./.	./.	1/1:4,4:8:9.03:142,9,0	1/1:11,4:16:18.52:264,19,0	1/1:3,7:11:6.15:179,6,0	1/1:10,0:13:9.01:84,9,0	./.	./.	./.
chr10	41783578	.	TG	T	149.34	PASS	AB=1.000;AC=17;AF=0.386;AN=44;BaseQRankSum=6.976;DP=264;FS=4.196;HRun=1;HaplotypeScore=70.6247;InbreedingCoeff=0.7618;MQ=49.69;MQ0=12;MQRankSum=-4.811;QD=4.67;ReadPosRankSum=1.729;VQSLOD=0.7691;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/0:12,0:12:36.09:0,36,499	0/0:29,0:9:27.08:0,27,331	0/0:36,0:15:42.13:0,42,552	./.	0/0:19,0:17:35.48:0,35,330	0/0:13,0:13:22.22:0,22,189	1/1:1,1:1:3:28,3,0	0/0:11,0:11:15.93:0,16,193	1/1:6,1:7:16.28:61,16,0	0/1:3,0:3:2.61:7,0,3	0/0:9,0:9:9.07:0,9,84	0/0:16,0:16:28.85:0,29,302	0/0:16,0:16:21.19:0,21,237	1/1:6,0:6:11.87:51,12,0	1/1:1,0:1:2.98:21,3,0	0/0:26,0:26:60.14:0,60,776	1/1:5,0:4:5.22:33,5,0	1/1:1,2:3:5.98:48,6,0	./.	./.	0/0:8,0:8:8.25:0,8,83	0/0:19,0:19:36.11:0,36,372	0/0:17,0:17:25.54:0,26,279	1/1:3,0:3:6.66:21,7,0	1/1:0,2:2:5.94:41,6,0	./.	./.
chr10	41783927	.	C	CTCT	37524.17	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=0.042;DP=778;FS=0.000;HRun=0;HaplotypeScore=139.6306;InbreedingCoeff=0.9858;MQ=80.71;MQ0=0;MQRankSum=-10.876;QD=52.63;ReadPosRankSum=6.051;VQSLOD=6.5607;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,40:47:99:2426,111,0	0/0:8,0:8:18.06:0,18,285	0/0:25,0:25:55.32:0,55,813	0/0:32,0:32:78.24:0,78,1191	1/1:1,26:27:75.17:1546,75,0	1/1:3,28:32:78.27:1704,78,0	1/1:1,29:30:75.26:1640,75,0	1/1:9,23:35:84.27:1686,84,0	1/1:5,23:28:69.24:1508,69,0	1/1:3,31:35:93.32:2007,93,0	1/1:0,19:20:60.16:1263,60,0	1/1:1,39:41:99:2292,105,0	1/1:8,34:43:99:2161,99,0	1/1:3,16:20:45.15:984,45,0	1/1:4,25:29:75.26:1638,75,0	1/1:2,21:24:63.22:1377,63,0	1/1:1,28:33:71.97:1573,72,0	1/1:2,9:11:27.09:589,27,0	1/1:10,17:25:60.19:1246,60,0	1/1:3,24:27:75.21:1592,75,0	1/1:5,20:26:33.11:722,33,0	1/1:1,17:19:42.14:918,42,0	1/1:2,24:27:69.24:1508,69,0	1/1:4,27:33:72.25:1573,72,0	1/1:2,32:34:96.33:2097,96,0	1/1:3,18:22:54.19:1181,54,0	1/1:3,30:36:93.32:2031,93,0	1/1:0,4:6:12.04:262,12,0
chr10	41784176	.	CT	C	951.02	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.969;DP=681;FS=5.051;HRun=1;HaplotypeScore=64.0471;InbreedingCoeff=0.9051;MQ=90.48;MQ0=0;MQRankSum=-1.833;QD=38.04;ReadPosRankSum=0.886;VQSLOD=4.2228;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:84.27:0,84,1316	0/0:11,0:11:33.11:0,33,528	0/0:23,0:23:69.24:0,69,1097	0/0:31,0:31:86.48:0,86,1282	0/0:36,0:36:99:0,102,1623	0/0:18,0:18:54.17:0,54,839	0/0:15,0:15:42.13:0,42,648	0/0:25,0:25:75.24:0,75,1178	0/0:31,0:31:90.31:0,90,1437	0/0:34,0:34:99:0,102,1631	0/0:30,0:30:90.29:0,90,1407	0/0:23,0:23:69.22:0,69,1078	0/0:20,0:20:57.19:0,57,910	0/0:21,0:21:63.21:0,63,1007	0/0:28,0:28:84.29:0,84,1337	0/0:28,0:28:84.29:0,84,1343	1/1:0,25:25:75.25:1046,75,0	0/0:22,0:22:63.21:0,63,997	0/0:25,0:25:75.24:0,75,1154	0/0:26,0:26:78.27:0,78,1244	0/0:26,0:26:78.27:0,78,1233	0/0:26,0:26:78.27:0,78,1247	0/0:20,0:20:60.20:0,60,959	0/0:22,0:22:63.21:0,63,1007	0/0:28,0:28:84.29:0,84,1339	0/0:26,0:26:78.27:0,78,1243	0/0:31,0:31:93.32:0,93,1486	0/0:2,0:2:6.02:0,6,96
chr10	41784771	.	TACACACACACACAC	T	3876.80	PASS	AB=0.744;AC=19;AF=0.339;AN=56;BaseQRankSum=4.591;DP=519;FS=54.668;HRun=0;HaplotypeScore=233.2809;InbreedingCoeff=0.3481;MQ=71.79;MQ0=15;MQRankSum=-6.465;QD=17.46;ReadPosRankSum=-1.982;VQSLOD=0.8803;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:31:30.10:0,30,888	0/0:9,0:9:15.05:0,15,434	0/0:35,0:27:9.03:0,9,113	0/0:25,0:21:6.02:0,6,112	0/0:8,0:13:15.04:0,15,255	0/1:16,1:18:14.38:435,0,14	1/1:13,0:13:12.04:220,12,0	0/0:31,0:31:4.25:0,4,30	1/1:9,6:14:15.05:548,15,0	0/0:24,0:24:43.11:0,43,650	0/1:15,0:19:6.36:6,0,120	0/1:5,8:14:7.18:942,0,7	1/1:10,12:21:21.07:819,21,0	1/1:7,5:12:9.03:199,9,0	0/1:11,0:23:49.92:120,0,50	0/0:12,0:16:9.03:0,9,311	0/1:17,0:22:40.22:203,0,40	0/0:14,0:14:10.05:0,10,264	0/0:6,0:6:6.02:0,6,136	0/0:19,0:23:39.13:0,39,823	0/0:22,0:21:15.04:0,15,281	0/1:8,4:12:7.03:170,0,7	1/1:9,2:10:6.02:136,6,0	1/1:14,1:14:2.88:24,3,0	0/1:13,0:17:53.59:54,0,103	0/0:18,0:19:51.15:0,51,1059	0/0:11,0:15:23.84:0,24,403	0/0:9,0:10:21.04:0,21,362
chr10	41788236	.	GCAATCACGAAAC	G	12999.77	PASS	AB=0.971;AC=19;AF=0.339;AN=56;BaseQRankSum=14.953;DP=713;FS=38.883;HRun=0;HaplotypeScore=284.6812;InbreedingCoeff=0.9038;MQ=76.98;MQ0=0;MQRankSum=-15.896;QD=67.01;ReadPosRankSum=3.503;VQSLOD=3.2088;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:58:99:0,172,9950	0/0:16,0:16:48.14:0,48,2594	0/0:17,0:17:50.94:0,51,2368	0/0:20,0:20:60.21:0,60,3327	0/0:31,0:31:93.32:0,93,5395	1/1:1,14:15:36.12:1383,36,0	1/1:5,4:9:6.02:220,6,0	0/0:30,0:30:90.30:0,90,4781	1/1:3,23:26:57.20:2198,57,0	0/0:41,0:41:99:0,123,7041	0/0:25,0:25:69.24:0,69,3968	1/1:1,18:19:54.19:2074,54,0	1/1:1,18:19:51.18:1966,51,0	1/1:2,9:11:30.06:1061,30,0	0/0:43,0:43:99:0,129,7781	0/0:33,0:33:93.32:0,93,5541	0/0:37,0:37:99:0,111,6515	0/0:14,0:14:42.14:0,42,2255	0/0:18,0:18:54.19:0,54,3244	0/1:33,1:34:19.38:19,0,5221	0/0:37,0:37:99:0,111,6411	1/1:3,15:18:27.09:979,27,0	1/1:1,23:24:54.66:1988,55,0	1/1:5,14:19:30.10:1112,30,0	0/0:28,0:28:84.29:0,84,5249	0/0:30,0:30:90.29:0,90,5283	0/0:34,0:33:99:0,102,6106	0/0:7,0:7:21.07:0,21,1200
chr10	41788343	.	T	TTTAATGTC	14660.40	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-1.770;DP=610;FS=1.677;HRun=0;HaplotypeScore=148.3885;InbreedingCoeff=0.9883;MQ=66.00;MQ0=0;MQRankSum=-15.770;QD=85.73;ReadPosRankSum=-0.294;VQSLOD=5.3494;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,123,3293	0/0:9,0:9:24.08:0,24,651	0/0:23,0:23:33.70:0,34,1301	0/0:23,0:23:48.15:0,48,1243	0/0:20,0:20:48.60:0,49,1196	1/1:9,9:18:45.15:1588,45,0	1/1:9,6:16:36.12:1373,36,0	0/0:45,0:45:99:0,111,2912	1/1:11,5:16:39.08:1239,39,0	0/0:30,0:30:84.29:0,84,2263	0/0:22,0:22:60.21:0,60,1617	1/1:3,13:18:45.12:1753,45,0	1/1:3,8:12:30.10:1289,30,0	1/1:6,12:20:48.16:2005,48,0	0/0:24,0:24:66.21:0,66,1705	0/0:29,0:29:84.26:0,84,2126	1/1:11,10:24:45.15:1906,45,0	0/0:16,0:16:36.11:0,36,920	0/0:20,0:20:48.15:0,48,1118	0/0:21,0:21:57.20:0,57,1545	0/0:39,0:39:99:0,105,2819	1/1:13,12:25:63.16:2128,63,0	1/1:8,5:14:27.06:828,27,0	1/1:5,3:8:15.05:552,15,0	0/0:26,0:26:72.25:0,72,1916	0/0:28,0:28:75.21:0,75,1938	0/0:11,0:11:30.10:0,30,801	0/0:3,0:3:9.03:0,9,225
chr10	41788351	.	C	CTT	1406.28	PASS	AB=0.975;AC=12;AF=0.214;AN=56;BaseQRankSum=13.741;DP=563;FS=4.062;HRun=1;HaplotypeScore=101.0820;InbreedingCoeff=0.1471;MQ=68.20;MQ0=0;MQRankSum=-12.664;QD=10.12;ReadPosRankSum=3.187;VQSLOD=0.8223;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,138,2146	0/0:8,0:8:24.08:0,24,391	0/0:27,0:27:74.61:0,75,1142	0/0:19,0:19:56.55:0,57,856	0/0:20,0:20:51.14:0,51,795	0/1:13,0:13:62.02:214,0,62	0/1:13,0:13:64.02:64,0,260	0/0:47,0:47:99:0,129,2080	0/1:11,0:11:93.86:94,0,164	0/0:29,0:29:87.29:0,87,1383	0/0:20,0:20:60.20:0,60,978	1/1:15,0:15:35.54:235,36,0	0/1:12,1:13:18.95:144,0,19	1/1:16,1:17:38.51:256,39,0	0/0:23,0:23:69.22:0,69,1090	0/0:28,0:28:84.26:0,84,1319	0/1:16,0:16:99:102,0,211	0/0:13,0:13:39.12:0,39,613	0/0:18,0:18:54.16:0,54,806	0/0:22,0:22:60.19:0,60,953	0/0:39,0:39:99:0,117,1822	0/1:21,1:22:99:242,0,257	0/1:10,1:11:94.77:142,0,95	0/1:8,0:8:74.70:78,0,75	0/0:26,0:26:75.26:0,75,1215	0/0:25,0:25:75.26:0,75,1211	0/0:11,0:11:33.11:0,33,530	0/0:3,0:3:9.03:0,9,147
chr10	41788352	.	A	AATGTCC	3771.48	PASS	AB=0.975;AC=12;AF=0.214;AN=56;BaseQRankSum=13.967;DP=564;FS=9.476;HRun=0;HaplotypeScore=135.8382;InbreedingCoeff=0.2131;MQ=68.43;MQ0=0;MQRankSum=-12.265;QD=27.33;ReadPosRankSum=3.043;VQSLOD=3.0418;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,138,3218	0/0:8,0:8:24.08:0,24,614	0/0:29,0:29:53.69:0,54,1506	0/0:19,0:19:21.35:0,21,1157	0/0:20,0:20:48.13:0,48,1098	0/1:13,0:13:41.65:415,0,42	0/1:13,0:13:99:214,0,203	0/0:47,0:47:99:0,132,3040	0/1:10,0:10:60.37:233,0,60	0/0:29,0:29:87.29:0,87,2151	0/0:21,0:21:60.21:0,60,1502	1/1:15,0:15:36.12:619,36,0	0/1:12,1:13:0.88:444,0,1	1/1:16,1:17:39.13:693,39,0	0/0:23,0:23:66.21:0,66,1607	0/0:26,0:26:78.27:0,78,1981	0/1:16,0:16:99:265,0,152	0/0:13,0:13:39.11:0,39,895	0/0:18,0:18:47.14:0,47,1008	0/0:22,0:22:60.16:0,60,1462	0/0:40,0:40:99:0,117,2743	0/1:21,1:22:99:480,0,175	0/1:10,1:11:64.19:218,0,64	0/1:8,0:8:29.94:190,0,30	0/0:26,0:26:75.20:0,75,1817	0/0:25,0:25:75.26:0,75,1892	0/0:11,0:11:33.10:0,33,756	0/0:3,0:3:9.03:0,9,230
chr10	41788501	.	A	ATC	8729.14	PASS	AB=1.000;AC=31;AF=0.554;AN=56;BaseQRankSum=-3.461;DP=614;FS=8.949;HRun=0;HaplotypeScore=126.0781;InbreedingCoeff=0.9192;MQ=88.27;MQ0=7;MQRankSum=-0.751;QD=27.03;ReadPosRankSum=-0.022;VQSLOD=6.0203;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,19:22:20.96:344,21,0	0/0:9,0:9:27.09:0,27,354	0/0:51,0:38:35.20:0,35,744	0/0:74,0:47:26.72:0,27,441	1/1:12,11:22:42.14:720,42,0	0/0:13,0:13:24.08:0,24,345	0/1:14,0:14:0:0,0,0	1/1:12,23:34:81.18:1234,81,0	0/0:22,0:22:18.06:0,18,233	1/1:12,11:24:63.16:983,63,0	1/1:3,16:19:15.05:257,15,0	0/0:19,0:19:48.15:0,48,670	0/0:17,0:17:39.13:0,39,526	0/0:13,0:13:30.10:0,30,406	1/1:13,10:22:39.13:661,39,0	1/1:12,13:25:54.16:891,54,0	0/0:21,0:20:57.14:0,57,721	1/1:6,2:7:9.03:142,9,0	1/1:4,9:13:36.12:610,36,0	1/1:14,12:25:43.03:708,43,0	1/1:4,6:10:3.01:52,3,0	0/0:14,0:14:18.06:0,18,230	0/0:18,0:18:9.03:0,9,118	0/0:19,0:19:14.92:0,15,154	1/1:6,14:19:12.04:206,12,0	1/1:6,20:25:66.17:1051,66,0	1/1:3,21:24:39.13:669,39,0	1/1:2,9:11:12.04:202,12,0
chr10	41788512	.	CCTCT	C	1536.79	PASS	AB=0.948;AC=18;AF=0.346;AN=52;BaseQRankSum=-2.084;DP=589;FS=18.844;HRun=0;HaplotypeScore=151.3562;InbreedingCoeff=0.2975;MQ=70.18;MQ0=17;MQRankSum=0.911;QD=5.63;ReadPosRankSum=3.060;VQSLOD=1.6946;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:21:0:0,0,50	0/0:9,0:9:9.03:0,9,154	0/0:45,0:28:17.77:0,18,173	0/1:57,0:27:3.79:4,0,156	0/0:33,0:32:8.72:0,9,144	1/1:12,2:13:20.99:282,21,0	0/0:2,13:15:0.47:0,0,1	0/0:27,0:26:9.80:0,10,77	1/1:5,11:17:5.93:40,6,0	0/1:24,0:23:69.28:69,0,215	0/0:13,0:13:3.89:0,4,28	1/1:19,0:17:27.05:404,27,0	1/1:11,2:13:24.06:336,24,0	1/1:13,1:14:20.95:276,21,0	0/0:24,0:23:4.34:0,4,28	0/1:27,0:27:42.14:50,0,42	0/1:23,0:21:48.45:179,0,48	0/1:8,0:7:15.10:15,0,87	0/0:19,0:19:24.48:0,24,308	0/0:26,0:24:17.46:0,17,185	0/0:10,0:9:0.47:0,0,1	./.	./.	0/1:5,12:17:42.07:42,0,42	0/1:16,0:14:0:0,0,0	0/0:26,0:25:7.73:0,8,368	0/0:26,0:26:30.82:0,31,373	0/0:10,0:10:6.49:0,6,90
chr10	41788526	.	TCTCTCTCTCC	T	1966.42	PASS	AB=0.998;AC=28;AF=0.500;AN=56;BaseQRankSum=-3.356;DP=589;FS=0.524;HRun=0;HaplotypeScore=182.2029;InbreedingCoeff=-0.2277;MQ=51.54;MQ0=33;MQRankSum=-0.493;QD=4.11;ReadPosRankSum=-1.626;VQSLOD=2.4940;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:23:13.84:0,14,94	0/0:8,0:7:14.28:0,14,287	0/1:28,0:12:16.14:16,0,69	0/1:39,0:11:21.22:21,0,97	0/1:36,0:35:33.55:34,0,289	1/1:15,0:14:1:35,1,0	1/1:19,0:18:0.09:0,0,0	0/1:41,0:39:99:265,0,264	0/0:20,0:20:2.03:0,2,5	1/1:22,4:24:58.56:753,59,0	1/1:10,3:13:2.60:10,3,0	0/1:18,0:15:13.49:46,0,13	0/1:17,0:17:76.55:112,0,77	0/1:18,0:18:54.96:55,0,145	1/1:21,5:25:13.54:126,14,0	0/1:21,0:21:99:155,0,192	0/1:28,0:26:11.39:11,0,1107	0/1:10,0:9:34.36:136,0,34	0/1:13,0:13:74.39:74,0,321	0/1:31,0:26:39.44:39,0,351	0/0:11,0:8:0.81:0,1,2	0/1:14,0:14:0:0,0,0	0/1:16,0:16:0:0,0,0	0/0:19,0:18:0.49:0,0,125	1/1:15,1:12:3.47:26,3,0	0/1:23,1:23:99:182,0,655	0/0:24,0:24:16.75:0,17,705	0/1:9,0:8:14.22:14,0,171
chr10	41788532	.	TCTCC	T	2751.38	PASS	AB=0.986;AC=38;AF=0.679;AN=56;BaseQRankSum=-3.072;DP=575;FS=6.397;HRun=0;HaplotypeScore=149.0010;InbreedingCoeff=-0.2772;MQ=49.65;MQ0=35;MQRankSum=-0.428;QD=4.88;ReadPosRankSum=-4.717;VQSLOD=0.5668;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:23:4.73:61,0,5	0/1:8,0:7:17.57:18,0,77	0/1:22,0:9:24.16:24,0,33	0/1:33,0:8:20.78:21,0,41	0/1:34,0:33:51.25:57,0,51	1/1:16,0:15:10.55:106,11,0	1/1:20,0:19:1.36:3,1,0	1/1:37,1:36:38.44:478,38,0	1/1:20,0:20:1.72:6,2,0	0/1:26,4:28:8.45:418,0,8	1/1:12,0:12:5.40:24,5,0	1/1:20,0:17:26.89:223,27,0	1/1:18,0:18:13.39:165,13,0	1/1:17,0:17:15.62:120,16,0	1/1:25,0:25:13.13:118,13,0	1/1:18,2:20:33.89:329,34,0	0/1:30,0:28:87.52:88,0,199	0/1:9,0:8:33.72:79,0,34	0/1:15,0:15:96.40:104,0,96	0/1:34,0:29:37.85:114,0,38	0/0:11,0:8:0.47:0,0,1	0/1:14,0:13:0:0,0,0	0/1:16,0:16:0:0,0,0	0/1:19,0:18:16.38:37,0,16	1/1:13,1:10:3:25,3,0	0/1:23,0:22:99:219,0,111	0/1:20,0:20:43.51:44,0,134	0/1:8,1:8:14.28:14,0,36
chr10	41788557	.	C	CTGTGTG	988.67	PASS	AB=0.667;AC=15;AF=0.300;AN=50;BaseQRankSum=-3.545;DP=469;FS=17.347;HRun=0;HaplotypeScore=148.0630;InbreedingCoeff=0.6323;MQ=40.16;MQ0=31;MQRankSum=3.458;QD=7.11;ReadPosRankSum=-0.522;VQSLOD=0.9446;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:17:5.32:0,5,26	0/0:6,0:6:10.84:0,11,158	./.	./.	0/0:32,0:32:10.43:0,10,105	1/1:13,0:13:1.82:23,2,0	1/1:16,0:15:2.28:63,2,0	0/0:23,0:18:41.01:0,41,286	1/1:24,0:24:21.06:414,21,0	0/0:23,0:22:61.93:0,62,757	0/0:13,0:13:6.16:0,6,77	1/1:18,0:17:10.30:159,10,0	0/1:9,9:17:14.56:134,0,15	1/1:17,0:17:9.22:177,9,0	0/0:25,0:25:7.02:0,7,37	0/0:16,0:16:17.74:0,18,208	0/0:32,0:29:38.38:0,38,515	0/0:11,0:9:16.62:0,17,179	0/0:16,0:15:31.22:0,31,359	0/0:30,0:26:12.18:0,12,116	0/0:11,0:6:0.47:0,0,1	1/1:15,1:15:3.01:72,3,0	./.	1/1:17,0:16:4.07:105,4,0	0/0:13,0:11:9.92:0,10,199	0/0:15,0:14:34.93:0,35,323	0/0:15,0:15:29.37:0,29,387	0/0:7,0:5:8.98:0,9,107
chr10	41788559	.	CTGTGTGTGTGTGTGTGTGTGTGTG	C	1903.41	PASS	AB=0.805;AC=11;AF=0.212;AN=52;BaseQRankSum=3.101;DP=471;FS=7.545;HRun=0;HaplotypeScore=216.1992;InbreedingCoeff=0.2589;MQ=40.02;MQ0=29;MQRankSum=-3.135;QD=13.13;ReadPosRankSum=-1.549;VQSLOD=1.1528;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:17:6.71:151,7,0	0/0:6,0:6:9.03:0,9,643	./.	0/0:1,0:1:3.01:0,3,199	0/1:16,12:30:8.73:35,0,9	0/0:14,0:14:11.69:0,12,1025	0/0:18,0:17:6.91:0,7,622	0/0:23,0:18:0:0,0,0	0/0:24,0:24:21.07:0,21,2107	0/0:15,0:23:53.67:0,54,1799	0/0:13,0:13:6.02:0,6,302	0/0:17,0:16:15.52:0,16,1217	0/0:20,0:18:22.89:0,23,1708	0/0:18,0:18:18.13:0,18,1630	0/0:14,0:25:2.69:0,3,90	1/1:8,7:15:18.53:1034,19,0	0/0:20,0:30:36.12:0,36,2012	0/0:8,0:9:17.28:0,17,759	0/1:13,3:15:3.18:268,0,3	0/1:20,9:25:24.17:121,0,24	1/1:12,0:6:0.47:1,0,0	0/0:18,0:17:6.02:0,6,585	./.	0/0:21,0:20:8.89:0,9,910	0/0:11,0:11:7.52:0,8,426	0/0:14,0:13:8.75:0,9,53	0/1:13,1:15:67.38:328,0,67	0/1:5,0:5:27.55:102,0,28
chr10	41790318	.	AGT	A	459.09	PASS	AB=0.881;AC=16;AF=0.320;AN=50;BaseQRankSum=-2.283;DP=515;FS=0.946;HRun=0;HaplotypeScore=95.3489;InbreedingCoeff=0.6039;MQ=69.25;MQ0=29;MQRankSum=2.345;QD=3.40;ReadPosRankSum=2.363;VQSLOD=2.0860;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:14,5:18:2.90:16,3,0	1/1:10,0:9:11.89:85,12,0	./.	./.	0/1:11,5:16:0:0,0,0	0/0:29,0:29:14.90:0,15,113	0/0:17,0:15:5.79:0,6,46	0/0:38,0:38:5.94:0,6,41	0/0:15,0:14:4.35:0,4,25	1/1:14,0:14:8.85:61,9,0	1/1:16,0:15:9.91:143,10,0	0/0:13,0:13:8.85:0,9,56	0/0:15,0:15:11.87:0,12,83	0/0:10,0:10:2.94:0,3,18	1/1:19,1:20:6.70:122,7,0	1/1:9,0:8:8.91:61,9,0	0/1:17,0:17:4.83:67,0,5	1/1:14,0:11:8.95:65,9,0	0/0:21,0:21:9.77:0,10,64	0/0:13,0:13:6.01:0,6,68	0/0:25,0:24:5.98:0,6,47	./.	0/0:12,0:11:14.94:0,15,117	0/0:23,0:20:5.99:0,6,49	0/0:16,0:16:14.99:0,15,126	0/0:13,0:12:8.85:0,9,60	0/0:17,0:17:23.97:0,24,211	0/0:9,0:7:3.01:0,3,43
chr10	41790362	.	TGAGAGAGAGAGAGA	T	419.32	PASS	AC=6;AF=0.125;AN=48;BaseQRankSum=2.507;DP=390;FS=14.340;HRun=0;HaplotypeScore=147.4889;InbreedingCoeff=0.3909;MQ=39.85;MQ0=31;MQRankSum=-1.288;QD=10.23;ReadPosRankSum=-0.145;VQSLOD=1.9385;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:15:0.47:1,0,0	0/0:9,0:9:7.84:0,8,266	./.	./.	./.	0/0:27,0:26:16.87:0,17,554	0/0:19,0:18:9.50:0,10,289	0/0:16,0:15:12.04:0,12,540	0/0:10,0:9:1.25:0,1,3	1/1:8,5:12:15.05:505,15,0	1/1:11,0:10:0.47:1,0,0	0/0:12,0:12:1.92:0,2,191	0/0:16,0:15:20.07:0,20,455	0/0:11,0:10:11.21:0,11,214	./.	0/0:21,0:19:25.02:0,25,1262	0/0:18,0:17:13.02:0,13,304	0/0:13,0:7:4.26:0,4,147	0/0:8,0:7:8.24:0,8,207	0/0:9,0:9:6.96:0,7,270	0/0:14,0:13:3.01:0,3,179	0/0:21,0:21:2.68:0,3,84	0/0:12,0:12:11.86:0,12,120	0/0:26,0:19:5.59:0,6,151	0/0:10,1:15:2.92:0,3,17	0/0:12,0:11:19.31:0,19,750	0/0:19,0:19:27.56:0,28,1446	0/0:5,0:3:4.26:0,4,182
chr10	41790490	.	ACAGG	A	3794.42	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=7.772;DP=557;FS=2.238;HRun=0;HaplotypeScore=104.7185;InbreedingCoeff=0.9981;MQ=88.37;MQ0=0;MQRankSum=-3.912;QD=48.65;ReadPosRankSum=2.820;VQSLOD=4.6578;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:90.31:0,90,2376	0/0:8,0:8:24.08:0,24,647	0/0:30,0:30:84.24:0,84,1981	0/0:19,0:19:51.17:0,51,1245	0/0:17,0:17:51.18:0,51,1376	0/0:12,0:12:33.11:0,33,890	0/0:25,0:25:75.26:0,75,2022	0/0:26,0:26:72.24:0,72,1863	0/0:18,0:18:51.15:0,51,1317	1/1:2,21:23:63.21:1165,63,0	1/1:0,15:15:36.12:683,36,0	0/0:24,0:24:66.23:0,66,1736	0/0:25,0:25:69.24:0,69,1817	0/0:22,0:22:66.22:0,66,1648	1/1:0,23:23:60.21:1139,60,0	0/0:15,0:15:42.14:0,42,1112	0/0:19,0:19:54.19:0,54,1431	1/1:1,16:17:45.11:807,45,0	0/0:18,0:18:45.15:0,45,1214	0/0:24,0:24:66.23:0,66,1762	0/0:32,0:32:87.30:0,87,2349	0/0:21,0:21:63.22:0,63,1680	0/0:14,0:14:42.11:0,42,1060	0/0:21,0:21:54.19:0,54,1435	0/0:13,0:13:39.13:0,39,1053	0/0:25,0:25:75.23:0,75,1814	0/0:12,0:12:36.12:0,36,964	0/0:7,0:7:21.07:0,21,543
chr10	41790820	.	T	TG	6929.99	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=-7.783;DP=532;FS=8.421;HRun=8;HaplotypeScore=110.8251;InbreedingCoeff=0.9734;MQ=82.03;MQ0=0;MQRankSum=-2.813;QD=22.57;ReadPosRankSum=1.695;VQSLOD=4.2907;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:69.04:0,69,631	0/0:10,0:10:24.01:0,24,220	0/0:15,0:15:13.96:0,14,217	0/0:16,0:16:29.35:0,29,248	0/0:31,0:31:81.01:0,81,732	1/1:5,25:30:63.12:708,63,0	1/1:3,13:16:33.10:380,33,0	1/1:23,0:23:55.63:333,56,0	1/1:4,25:29:69.21:796,69,0	0/0:23,0:23:63.01:0,63,576	0/0:15,0:15:41.99:0,42,380	1/1:2,13:15:36.11:415,36,0	1/1:2,18:20:45.13:519,45,0	1/1:3,13:16:36.11:413,36,0	0/0:18,0:18:44.98:0,45,406	0/0:14,1:15:4.40:0,4,295	0/0:29,0:29:62.97:0,63,568	0/0:12,0:12:26.99:0,27,241	1/1:12,1:13:26.57:191,27,0	1/1:19,1:20:53.40:377,53,0	1/1:12,1:13:29.73:220,30,0	1/1:2,15:17:42.12:485,42,0	1/1:1,6:7:18.05:208,18,0	1/1:3,25:28:50.77:838,51,0	0/0:17,0:17:45.01:0,45,407	1/1:24,0:24:50.01:323,50,0	1/1:31,0:31:86.27:626,86,0	1/1:5,0:5:14.82:99,15,0
chr10	41790828	.	G	GA	6115.92	PASS	AB=1.000;AC=32;AF=0.571;AN=56;BaseQRankSum=-6.401;DP=529;FS=20.740;HRun=0;HaplotypeScore=115.0945;InbreedingCoeff=0.3898;MQ=83.37;MQ0=0;MQRankSum=-1.463;QD=16.31;ReadPosRankSum=1.566;VQSLOD=5.2989;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:28:52.23:52,0,140	0/0:12,0:12:27.08:0,27,359	0/0:16,0:16:22.31:0,22,419	0/0:18,0:18:35.08:0,35,429	0/0:27,0:27:57.31:0,57,355	1/1:27,0:27:7.80:184,8,0	0/1:16,0:16:40.36:83,0,40	1/1:1,23:24:66.18:908,66,0	1/1:25,0:25:36:203,36,0	0/0:23,0:23:2.75:0,3,74	0/0:15,0:15:7.84:0,8,138	1/1:13,0:13:30.93:116,31,0	0/1:22,0:22:27.47:102,0,27	1/1:16,0:16:7.61:93,8,0	0/1:17,0:17:14.17:14,0,65	0/1:16,0:16:26.63:29,0,27	0/0:27,0:27:72.14:0,72,936	0/1:12,0:12:1.57:2,0,38	1/1:2,12:14:39.08:484,39,0	1/1:2,17:19:54.18:776,54,0	1/1:2,11:13:30.10:431,30,0	1/1:15,0:15:15.63:115,16,0	0/1:9,0:9:33.94:36,0,34	0/1:30,0:30:36.13:184,0,36	0/0:16,0:16:26.66:0,27,111	1/1:0,23:23:63.14:839,63,0	1/1:1,29:31:87.28:1248,87,0	1/1:0,5:5:15.05:218,15,0
chr10	41790873	.	C	CTCAG	1408.24	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-6.946;DP=535;FS=4.566;HRun=0;HaplotypeScore=138.9426;InbreedingCoeff=0.9925;MQ=71.09;MQ0=0;MQRankSum=-3.157;QD=58.68;ReadPosRankSum=0.344;VQSLOD=5.4102;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,108,1984	0/0:8,0:8:24.07:0,24,410	0/0:12,0:12:36.12:0,36,645	0/0:21,0:21:49.98:0,50,860	0/0:22,0:22:60.21:0,60,1101	0/0:22,0:22:45.15:0,45,828	0/0:17,0:17:48.16:0,48,883	0/0:22,0:22:60.20:0,60,1074	0/0:22,0:22:57.20:0,57,1049	0/0:27,0:27:75.26:0,75,1372	0/0:13,0:13:27.09:0,27,487	0/0:11,0:11:24.08:0,24,442	0/0:19,0:19:51.17:0,51,936	0/0:18,0:18:42.14:0,42,767	0/0:19,0:19:48.16:0,48,872	0/0:16,0:16:48.16:0,48,883	1/1:3,21:24:57.20:1503,57,0	0/0:9,0:9:27.09:0,27,478	0/0:30,0:30:84.27:0,84,1499	0/0:21,0:21:54.19:0,54,990	0/0:23,0:23:63.20:0,63,1122	0/0:12,0:12:33.11:0,33,607	0/0:11,0:11:30.10:0,30,552	0/0:19,0:19:51.13:0,51,902	0/0:17,0:17:51.17:0,51,939	0/0:24,0:24:69.21:0,69,1210	0/0:28,0:27:69.24:0,69,1239	0/0:11,0:10:30.05:0,30,486
chr10	41791208	.	GATATATATATATATATATATATATATATATAT	G	1530.87	PASS	AC=18;AF=0.500;AN=36;BaseQRankSum=1.811;DP=222;FS=18.888;HRun=0;HaplotypeScore=159.2541;InbreedingCoeff=0.4613;MQ=78.26;MQ0=4;MQRankSum=-0.949;QD=11.96;ReadPosRankSum=0.328;VQSLOD=1.1365;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,4:11:3.01:38,3,0	./.	./.	0/0:19,0:8:1.25:0,1,5	1/1:17,8:25:2.61:15,3,0	0/0:3,0:2:3.01:0,3,84	0/0:3,0:3:2.99:0,3,23	1/1:28,0:28:3.47:53,3,0	./.	0/0:7,0:7:3.01:0,3,262	./.	./.	./.	./.	0/0:1,0:1:3.01:0,3,118	1/1:6,1:7:3.01:39,3,0	0/0:8,0:11:24.08:0,24,1952	0/0:7,0:6:9:0,9,670	1/1:7,3:11:12.02:739,12,0	1/1:14,2:16:9:158,9,0	0/0:3,0:3:0.47:0,0,1	./.	./.	./.	0/0:4,0:4:3.01:0,3,122	1/1:11,1:12:6.02:341,6,0	1/1:9,0:10:3:25,3,0	1/1:4,4:8:3.01:246,3,0
chr10	41791261	.	TGAGAGAGAGA	T	748	PASS	AB=0.764;AC=10;AF=0.250;AN=40;BaseQRankSum=3.132;DP=286;FS=27.762;HRun=0;HaplotypeScore=75.7281;InbreedingCoeff=0.2693;MQ=42.99;MQ0=31;MQRankSum=-3.969;QD=9.23;ReadPosRankSum=2.035;VQSLOD=0.1214;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:12,2:14:0:0,0,0	./.	./.	0/0:50,0:7:0.47:0,0,1	0/0:17,0:17:3.01:0,3,51	./.	0/0:5,0:5:3.01:0,3,97	0/0:21,0:21:3.28:0,3,8	0/0:5,0:5:6.02:0,6,271	./.	./.	0/0:1,0:1:3.01:0,3,97	0/0:5,0:5:9.03:0,9,404	0/0:2,0:4:12.04:0,12,242	./.	1/1:6,6:13:2.43:38,2,0	0/0:5,0:7:6.02:0,6,103	0/0:8,0:9:2.98:0,3,102	0/1:14,0:16:25.45:135,0,25	0/0:13,0:18:2.97:0,3,20	0/1:3,3:6:0:0,0,0	0/0:6,0:6:9.03:0,9,342	0/0:5,0:5:0:0,0,0	./.	./.	1/1:5,5:12:21.07:538,21,0	0/1:5,1:10:29.18:109,0,29	1/1:8,1:9:3:39,3,0
chr10	41792877	.	CTTG	C	4874.78	PASS	AB=0.564;AC=9;AF=0.161;AN=56;BaseQRankSum=3.596;DP=846;FS=4.829;HRun=0;HaplotypeScore=188.4675;InbreedingCoeff=0.8637;MQ=55.17;MQ0=40;MQRankSum=2.950;QD=38.38;ReadPosRankSum=2.198;VQSLOD=5.0901;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:57:99:0,154,3467	0/0:12,0:12:36.12:0,36,816	0/0:38,0:11:30.06:0,30,615	0/0:49,0:19:51.17:0,51,1054	0/0:23,0:23:66.23:0,66,1441	0/0:20,0:20:57.20:0,57,1292	0/0:33,0:33:90.13:0,90,1766	0/0:22,0:22:54.15:0,54,1169	0/0:24,0:24:66.23:0,66,1492	1/1:5,26:31:63.02:1280,63,0	1/1:3,17:19:48.16:799,48,0	0/0:36,0:36:99:0,102,2311	0/0:40,0:39:99:0,114,2565	0/0:36,0:35:99:0,99,2183	1/1:0,28:28:66.23:1099,66,0	0/0:38,0:37:96.33:0,96,2175	0/0:56,0:56:99:0,160,3555	0/1:5,17:22:99:599,0,188	0/0:11,0:11:30.10:0,30,666	0/0:19,0:19:54.18:0,54,1178	0/0:72,0:72:99:0,196,4277	0/0:22,0:22:57.15:0,57,1226	0/0:30,0:30:84.29:0,84,1856	0/0:38,0:38:99:0,108,2343	1/1:2,24:26:66.23:1098,66,0	0/0:19,0:19:57.19:0,57,1242	0/0:16,0:16:45.15:0,45,1002	0/0:8,0:8:15.05:0,15,322
chr10	41792968	.	TCTC	T	11347.11	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=15.742;DP=743;FS=0.599;HRun=0;HaplotypeScore=112.8011;InbreedingCoeff=0.9998;MQ=67.70;MQ0=1;MQRankSum=-4.191;QD=43.31;ReadPosRankSum=3.668;VQSLOD=5.9860;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,47:48:99:2019,120,0	0/0:16,0:16:48.16:0,48,1088	0/0:23,0:22:62.83:0,63,1219	0/0:23,0:21:54.09:0,54,1192	1/1:1,15:16:45.08:694,45,0	0/0:17,0:16:48.15:0,48,1037	0/0:32,0:32:90.09:0,90,1879	1/1:0,17:17:51.14:789,51,0	0/0:35,0:35:99:0,105,2342	0/0:24,0:24:66.22:0,66,1479	0/0:21,0:21:57.18:0,57,1235	0/0:21,0:21:63.17:0,63,1300	0/0:32,0:32:90.31:0,90,2053	0/0:39,0:39:99:0,114,2549	0/0:42,0:42:99:0,120,2537	1/1:1,36:37:93.32:1571,93,0	0/0:41,0:41:99:0,117,2562	0/0:28,0:28:78.27:0,78,1787	1/1:2,10:10:26.99:393,27,0	1/1:1,23:25:72.25:1226,72,0	1/1:0,47:47:99:1968,117,0	0/0:15,0:15:45.13:0,45,925	0/0:25,0:25:72.25:0,72,1660	0/0:29,0:29:84.28:0,84,1873	0/0:18,0:18:48.16:0,48,1071	1/1:1,24:25:72.25:1207,72,0	1/1:1,20:21:51.17:868,51,0	1/1:0,14:14:36.12:613,36,0
chr10	41795144	.	AC	A	2822.97	PASS	AB=0.670;AC=11;AF=0.196;AN=56;BaseQRankSum=11.308;DP=726;FS=18.837;HRun=1;HaplotypeScore=165.1427;InbreedingCoeff=-0.0316;MQ=46.12;MQ0=55;MQRankSum=-9.821;QD=10.19;ReadPosRankSum=-2.460;VQSLOD=-0.1684;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:12,13:21:99:155,0,191	0/0:6,0:6:18.06:0,18,288	0/0:70,0:19:57.14:0,57,857	0/0:62,0:17:48.11:0,48,690	0/1:8,19:26:64.27:64,0,306	0/0:19,0:18:48.89:0,49,731	0/0:24,0:21:51.17:0,51,815	1/1:13,13:12:19.13:387,19,0	0/0:15,0:15:42.13:0,42,663	0/0:23,0:22:63.21:0,63,1007	0/0:11,0:11:30.09:0,30,458	0/0:23,0:23:56.63:0,57,945	0/0:22,0:22:66.23:0,66,1055	0/0:23,0:23:60.03:0,60,955	0/0:21,0:20:54.18:0,54,863	0/1:15,13:26:99:460,0,331	0/0:28,0:27:66.22:0,66,1052	0/0:24,0:24:63.65:0,64,963	0/1:15,19:21:59.48:674,0,59	0/1:7,12:15:99:145,0,207	0/1:34,29:50:99:176,0,533	0/0:7,0:7:6.02:0,6,93	0/0:16,0:16:12.98:0,13,194	0/0:35,0:35:95.90:0,96,1470	0/0:19,0:18:46.39:0,46,719	0/1:14,14:26:99:576,0,330	0/1:11,11:21:99:313,0,246	0/1:4,1:5:26.53:27,0,177
chr10	41795156	.	A	AT	126.54	PASS	AB=0.937;AC=7;AF=0.125;AN=56;BaseQRankSum=5.013;DP=587;FS=11.547;HRun=0;HaplotypeScore=177.7176;InbreedingCoeff=0.1711;MQ=45.45;MQ0=29;MQRankSum=-4.326;QD=1.49;ReadPosRankSum=-2.958;VQSLOD=1.5977;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:17,2:18:13.70:67,14,0	0/0:6,0:6:18.06:0,18,251	0/0:59,0:21:60.63:0,61,800	0/0:56,0:18:50.50:0,51,593	0/0:18,0:18:8.18:0,8,99	0/0:19,0:18:42.43:0,42,587	0/0:24,0:21:51.14:0,51,698	0/0:9,0:9:26.76:0,27,332	0/1:15,1:16:3.71:4,0,491	0/0:28,0:26:69.11:0,69,905	0/0:10,0:10:25.64:0,26,340	0/0:26,0:26:54.65:0,55,746	0/0:18,0:16:48.11:0,48,642	0/0:16,0:16:39.12:0,39,544	0/0:23,0:23:48.15:0,48,669	0/1:17,5:21:99:142,0,202	0/0:22,1:22:33.39:0,33,692	0/0:22,0:22:60.14:0,60,772	0/0:17,0:16:44.97:0,45,517	0/1:13,0:11:16.49:16,0,38	0/0:32,3:25:5.84:0,6,52	0/0:7,0:7:3:0,3,25	0/0:18,0:18:13.86:0,14,154	0/0:32,0:32:83.78:0,84,1124	0/0:18,1:19:33.62:0,34,462	0/0:16,0:15:42.10:0,42,507	0/1:12,1:12:2.62:3,0,208	0/1:2,0:2:16.98:17,0,31
chr10	41795160	.	ACACATG	A	5587	PASS	AB=0.815;AC=46;AF=0.852;AN=54;BaseQRankSum=-2.900;DP=568;FS=30.029;HRun=0;HaplotypeScore=185.8461;InbreedingCoeff=0.4657;MQ=45.42;MQ0=32;MQRankSum=1.371;QD=11.36;ReadPosRankSum=1.980;VQSLOD=2.7527;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:18:6.59:25,7,0	0/0:6,0:6:15.03:0,15,169	0/1:51,0:15:11.49:11,0,177	0/0:52,0:14:23.25:0,23,213	1/1:18,0:18:0.72:16,1,0	1/1:20,0:19:41.66:575,42,0	1/1:24,0:21:44.44:516,44,0	1/1:8,0:8:12.57:64,13,0	1/1:17,0:17:39.01:510,39,0	1/1:30,0:26:28.59:235,29,0	1/1:10,0:10:6.56:125,7,0	1/1:27,0:27:19.64:406,20,0	1/1:17,0:15:33.03:456,33,0	1/1:16,0:16:28.80:408,29,0	1/1:25,0:25:23.64:261,24,0	1/1:18,0:17:22.20:134,22,0	1/1:24,0:23:22.28:148,22,0	1/1:23,0:23:3.60:115,4,0	1/1:15,0:14:22.77:139,23,0	0/0:12,0:10:2.06:0,2,16	1/1:31,0:22:3.67:26,4,0	./.	0/1:7,10:17:6.43:29,0,6	1/1:33,0:33:55.58:935,56,0	1/1:18,0:18:6.70:45,7,0	1/1:14,0:13:31.77:212,32,0	1/1:14,0:12:20.13:172,20,0	1/1:2,0:1:2.99:23,3,0
chr10	41795162	.	ACATG	A	1946.71	PASS	AB=0.996;AC=30;AF=0.556;AN=54;BaseQRankSum=5.575;DP=545;FS=1.504;HRun=0;HaplotypeScore=180.0777;InbreedingCoeff=0.0215;MQ=44.06;MQ0=35;MQRankSum=-0.673;QD=4.92;ReadPosRankSum=0.510;VQSLOD=2.5013;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:17:0.62:0,1,2	0/0:6,0:6:8.39:0,8,276	0/1:45,0:12:26.09:26,0,347	0/0:47,0:12:28.30:0,28,401	0/1:17,1:18:12.39:15,0,12	1/1:21,0:20:2.48:98,2,0	0/1:24,0:21:48.57:49,0,57	1/1:6,0:6:14.64:111,15,0	0/1:16,0:16:2.74:192,0,3	0/0:30,0:26:8.79:0,9,363	0/1:10,0:10:28.28:28,0,152	0/1:25,0:25:68.25:68,0,78	0/1:16,0:14:2.90:130,0,3	0/1:16,0:16:22.40:36,0,22	0/1:24,0:24:99:140,0,243	1/1:18,0:17:15.15:130,15,0	0/0:24,0:22:13.31:0,13,429	0/1:22,0:21:32.74:33,0,408	1/1:13,1:13:26.94:266,27,0	1/1:12,0:10:0.35:1,0,0	1/1:29,0:21:5.20:32,5,0	./.	0/1:17,0:17:8.53:15,0,9	0/1:33,0:33:52.99:201,0,53	0/0:16,0:16:25.35:0,25,248	1/1:13,1:13:31.95:319,32,0	1/1:13,1:12:21.48:193,21,0	1/1:2,0:1:3:29,3,0
chr10	41795163	.	CAT	C	1180.91	PASS	AB=0.974;AC=26;AF=0.481;AN=54;BaseQRankSum=8.686;DP=537;FS=18.602;HRun=0;HaplotypeScore=169.7177;InbreedingCoeff=0.0509;MQ=44.04;MQ0=35;MQRankSum=-6.081;QD=3.61;ReadPosRankSum=-4.804;VQSLOD=0.1266;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:18,2:17:5.97:45,6,0	0/0:6,0:6:5.11:0,5,233	0/0:42,0:9:7.26:0,7,353	0/0:45,0:12:30.56:0,31,493	0/1:18,0:18:12.69:13,0,16	0/0:21,0:20:34.50:0,35,170	0/1:23,1:21:3.78:4,0,247	0/1:6,0:6:11.80:85,0,12	0/1:16,0:16:26.40:26,0,112	0/1:29,1:26:37.16:37,0,392	0/1:10,0:10:7.13:7,0,165	0/1:25,0:25:7.61:8,0,168	0/1:14,1:13:22.84:23,0,108	0/0:16,0:16:15.55:0,16,161	0/1:22,1:23:36.74:37,0,244	1/1:12,5:16:26.41:199,26,0	0/0:23,1:22:32.41:0,32,390	0/1:20,2:21:68.30:68,0,329	0/1:14,0:13:40.19:168,0,40	1/1:11,0:9:3.66:14,4,0	1/1:26,3:21:6.56:31,7,0	./.	0/1:16,1:17:37.43:37,0,44	0/0:33,0:33:14.71:0,15,285	0/0:15,1:16:24.38:0,24,204	1/1:13,1:13:35.75:344,36,0	1/1:13,1:12:21.39:178,21,0	1/1:2,0:1:3.01:30,3,0
chr10	41795164	.	ATG	A	2349.83	PASS	AB=0.954;AC=33;AF=0.611;AN=54;BaseQRankSum=6.246;DP=517;FS=0.480;HRun=0;HaplotypeScore=160.9993;InbreedingCoeff=-0.0406;MQ=44.11;MQ0=34;MQRankSum=-4.569;QD=6.04;ReadPosRankSum=-6.694;VQSLOD=1.1715;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:10,10:17:3.37:9,3,0	0/1:5,0:5:10.37:10,0,228	0/1:39,1:9:26.12:26,0,304	0/0:44,1:12:28.08:0,28,363	1/1:4,13:17:1.04:41,1,0	0/1:20,2:21:36.32:36,0,76	0/0:22,1:20:4.91:0,5,154	1/1:1,4:5:12.51:186,13,0	0/1:16,1:17:72.89:166,0,73	0/1:30,1:27:15.45:15,0,404	0/1:8,1:9:57.79:58,0,171	0/1:24,1:25:58.46:58,0,65	0/1:12,2:12:33.21:64,0,33	0/0:15,0:15:20.45:0,20,87	0/1:21,1:22:99:139,0,270	1/1:8,7:14:18:168,18,0	0/0:23,0:21:0.21:0,0,420	0/1:22,0:21:89.20:89,0,399	1/1:3,7:9:27.08:394,27,0	1/1:2,9:9:5.60:43,6,0	1/1:20,8:21:5.61:39,6,0	./.	1/1:15,0:15:0.58:26,1,0	0/1:33,0:33:82.66:83,0,136	0/0:15,1:16:23.96:0,24,240	1/1:3,10:12:36.08:525,36,0	1/1:4,9:11:22.80:292,23,0	1/1:1,1:1:3.01:49,3,0
chr10	41795170	.	ACGCAC	A	225.01	PASS	AB=0.922;AC=5;AF=0.093;AN=54;BaseQRankSum=7.300;DP=527;FS=10.169;HRun=0;HaplotypeScore=198.4840;InbreedingCoeff=0.3132;MQ=41.61;MQ0=36;MQRankSum=-6.335;QD=3.52;ReadPosRankSum=-4.352;VQSLOD=0.6944;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:21,1:19:21.52:117,22,0	0/0:8,0:7:18.06:0,18,323	0/0:28,0:5:12.04:0,12,184	0/0:38,0:9:11.29:0,11,183	0/0:18,0:18:0.06:0,0,8	0/0:21,0:20:40.32:0,40,244	0/0:22,0:19:37.50:0,38,290	0/0:7,0:6:10.54:0,11,54	0/0:16,0:16:34.14:0,34,229	0/0:33,0:27:65.80:0,66,1031	0/0:8,0:8:20.74:0,21,308	0/0:21,0:22:38.11:0,38,351	0/0:13,0:11:27.50:0,28,138	0/0:19,0:19:31.54:0,32,235	0/0:25,0:25:44.91:0,45,636	0/1:12,3:15:23.87:118,0,24	0/0:25,0:22:48.55:0,49,842	0/0:23,0:21:51.38:0,51,915	0/0:12,0:11:5.89:0,6,92	0/1:13,0:13:1.22:74,0,1	0/0:28,1:20:0.79:0,1,23	./.	0/0:16,0:16:4.55:0,5,19	0/0:33,0:32:85.61:0,86,775	0/0:18,0:18:29.28:0,29,530	0/0:18,0:17:16.36:0,16,294	0/1:13,1:12:35.57:36,0,66	0/0:3,0:2:5.95:0,6,49
chr10	41795171	.	C	CAG	103.99	PASS	AB=0.978;AC=12;AF=0.222;AN=54;BaseQRankSum=8.690;DP=527;FS=39.825;HRun=0;HaplotypeScore=185.9803;InbreedingCoeff=0.0586;MQ=41.83;MQ0=37;MQRankSum=-7.231;QD=0.62;ReadPosRankSum=-4.851;VQSLOD=-0.6506;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:22,1:19:10.47:25,0,10	0/0:8,0:7:18.04:0,18,247	0/0:26,0:5:12.04:0,12,164	0/0:34,0:9:14.41:0,14,167	1/1:16,0:16:4.31:10,4,0	0/0:21,0:20:22.38:0,22,607	0/0:23,0:20:33.84:0,34,538	0/0:6,0:5:10.05:0,10,62	0/0:16,0:16:24.25:0,24,508	0/0:33,0:27:66.90:0,67,896	0/0:8,0:8:21.01:0,21,291	0/0:23,0:22:38.83:0,39,543	0/0:13,0:11:25.73:0,26,360	0/0:20,0:20:29.93:0,30,464	0/0:27,0:27:44.05:0,44,566	0/1:14,1:15:24.69:75,0,25	0/1:24,2:23:13.16:13,0,629	0/0:23,0:21:50.59:0,51,762	0/1:12,0:11:33.27:33,0,37	0/1:13,0:13:3.76:4,0,37	1/1:25,3:19:5.10:12,5,0	./.	0/0:15,0:16:2.69:0,3,46	0/0:32,0:31:75.86:0,76,1153	0/0:17,1:19:26.48:0,26,385	0/1:18,0:17:41.89:42,0,198	0/1:14,0:12:16.37:16,0,80	0/1:3,0:2:14.99:15,0,20
chr10	41795176	.	ACG	A	2316.41	PASS	AB=1.000;AC=31;AF=0.574;AN=54;BaseQRankSum=0.529;DP=492;FS=2.947;HRun=0;HaplotypeScore=158.4545;InbreedingCoeff=0.4839;MQ=42.04;MQ0=34;MQRankSum=0.571;QD=8.55;ReadPosRankSum=1.629;VQSLOD=3.3088;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:18:4.59:16,5,0	0/0:8,0:7:1.92:0,2,66	0/0:20,0:4:7.72:0,8,50	0/0:26,0:5:4.72:0,5,36	0/0:15,0:15:0.62:0,1,2	1/1:19,0:18:35.87:294,36,0	0/1:23,0:19:26.95:181,0,27	1/1:5,0:4:5.93:40,6,0	1/1:14,0:14:24.99:224,25,0	0/0:29,0:23:44.20:0,44,323	0/0:9,0:8:5.59:0,6,95	1/1:17,5:21:35.37:339,35,0	0/1:13,0:11:44.91:155,0,45	1/1:17,1:18:29.95:275,30,0	0/0:29,0:29:31.30:0,31,364	1/1:15,0:15:16.73:88,17,0	0/0:30,0:27:2.10:0,2,228	0/0:24,0:22:30.50:0,30,333	1/1:6,0:5:0.84:33,1,0	0/1:11,0:11:0.69:8,0,1	1/1:26,0:17:1.03:3,1,0	./.	1/1:14,1:15:2.49:24,2,0	1/1:29,2:30:24.39:554,24,0	0/0:20,0:21:1.70:0,2,252	1/1:14,0:14:13.76:114,14,0	1/1:13,0:11:21.68:122,22,0	1/1:3,0:2:0.77:14,1,0
chr10	41795177	.	C	CAG	115.49	PASS	AB=0.929;AC=10;AF=0.185;AN=54;BaseQRankSum=6.592;DP=481;FS=8.260;HRun=0;HaplotypeScore=164.1915;InbreedingCoeff=0.1154;MQ=42.17;MQ0=35;MQRankSum=-5.116;QD=0.94;ReadPosRankSum=-4.519;VQSLOD=0.3445;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,2:16:3.02:0,3,20	0/0:8,0:7:15.05:0,15,208	0/0:18,0:4:9.03:0,9,141	0/1:24,0:5:1.82:2,0,124	1/1:14,0:14:3.06:7,3,0	0/0:19,0:18:17.20:0,17,204	0/0:25,0:20:6.49:0,6,203	0/0:4,0:3:5.75:0,6,31	0/1:16,0:16:5.10:5,0,212	0/0:28,0:22:53.74:0,54,753	0/0:8,0:7:18.06:0,18,273	0/0:22,0:21:34.43:0,34,214	0/0:13,0:11:32.54:0,33,237	0/0:18,0:18:29.26:0,29,192	0/0:30,0:30:56.21:0,56,801	0/1:14,0:14:10.42:10,0,29	0/0:30,0:27:57.88:0,58,738	0/0:23,0:21:50.67:0,51,776	0/1:5,1:5:12.09:81,0,12	0/1:8,3:11:31.60:32,0,34	1/1:21,3:15:6.23:17,6,0	./.	0/0:15,0:15:2.66:0,3,20	0/0:30,0:29:52.40:0,52,485	0/0:21,0:21:35.47:0,35,511	0/1:12,1:12:65.72:86,0,66	0/0:12,0:10:6.15:0,6,74	0/0:3,0:2:4.61:0,5,18
chr10	41795178	.	GCA	G	272.81	PASS	AB=0.931;AC=22;AF=0.440;AN=50;BaseQRankSum=1.406;DP=491;FS=1.032;HRun=0;HaplotypeScore=161.1492;InbreedingCoeff=0.0826;MQ=41.79;MQ0=36;MQRankSum=0.220;QD=0.97;ReadPosRankSum=1.774;VQSLOD=2.6082;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:16:4.59:16,5,0	0/1:6,1:7:25.70:26,0,28	./.	./.	0/0:14,0:14:0.82:0,1,2	1/1:20,0:19:0.89:2,1,0	0/0:24,0:19:5.81:0,6,56	0/0:6,0:5:2.49:0,2,6	0/1:14,3:17:34.02:80,0,34	0/0:26,0:20:8.51:0,9,71	0/0:9,0:8:4.23:0,4,25	1/1:24,0:23:9.77:73,10,0	0/1:12,1:11:19.61:20,0,101	1/1:19,0:19:5.97:45,6,0	0/1:28,1:31:11.54:12,0,162	1/1:14,0:14:1.81:5,2,0	0/0:30,0:27:9.46:0,9,83	0/0:24,0:22:5.37:0,5,34	0/0:6,0:5:2.69:0,3,8	0/1:11,0:11:1.13:8,0,1	1/1:24,0:15:1.22:4,1,0	./.	0/0:15,0:15:0.43:0,0,1	0/1:26,0:30:41.79:61,0,42	0/1:21,1:22:44.66:45,0,98	0/1:13,0:12:1.26:1,0,6	1/1:12,0:10:1.82:5,2,0	0/0:3,0:2:1.55:0,2,4
chr10	41795180	.	A	AT	208.92	PASS	AB=0.856;AC=9;AF=0.167;AN=54;BaseQRankSum=7.180;DP=500;FS=12.913;HRun=0;HaplotypeScore=166.7911;InbreedingCoeff=0.0431;MQ=41.56;MQ0=34;MQRankSum=-5.960;QD=1.92;ReadPosRankSum=-2.504;VQSLOD=1.1073;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:20,3:17:2.07:23,2,0	0/0:9,0:8:14.97:0,15,165	0/0:14,0:3:6.02:0,6,81	0/0:19,0:4:11.87:0,12,124	0/1:12,2:14:1.82:2,0,5	0/0:21,0:20:36.40:0,36,465	0/0:26,0:21:31.32:0,31,403	0/0:8,0:7:11.53:0,12,62	0/0:18,0:18:38.74:0,39,465	0/0:27,0:20:50.90:0,51,657	0/0:9,0:8:21.03:0,21,251	0/0:25,0:24:36.33:0,36,420	0/0:13,0:11:30.03:0,30,390	0/0:20,0:20:30.07:0,30,384	0/0:30,0:30:57.13:0,57,755	0/1:12,2:14:51.39:51,0,84	0/0:33,1:31:67.09:0,67,841	0/0:24,0:22:49.08:0,49,635	0/1:7,1:8:19.99:52,0,20	0/0:10,1:11:0.17:0,0,22	0/1:21,3:15:0.13:0,0,10	./.	0/0:16,0:16:3.80:0,4,43	0/0:32,0:31:74.05:0,74,854	0/0:22,1:23:39.83:0,40,491	0/1:9,3:11:99:137,0,121	0/1:10,1:9:25.06:25,0,161	0/1:2,1:2:8:42,0,8
chr10	41795194	.	A	AAGG	1714.96	PASS	AB=0.674;AC=15;AF=0.278;AN=54;BaseQRankSum=8.129;DP=464;FS=2.102;HRun=0;HaplotypeScore=130.2464;InbreedingCoeff=0.6433;MQ=42.83;MQ0=35;MQRankSum=-8.795;QD=18.24;ReadPosRankSum=-4.123;VQSLOD=2.9800;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,2:16:16.29:196,16,0	0/0:9,0:8:18.06:0,18,305	./.	0/0:13,0:2:3.01:0,3,45	1/1:1,3:7:11.94:111,12,0	0/0:20,0:19:32.87:0,33,599	0/0:24,0:19:29.80:0,30,546	0/0:8,0:5:12.04:0,12,206	0/0:16,0:16:36.12:0,36,574	0/0:30,0:23:57.19:0,57,976	0/0:9,0:8:24.04:0,24,384	0/0:26,0:25:36.59:0,37,597	0/0:18,0:16:36.12:0,36,631	0/0:19,0:19:27.56:0,28,450	0/0:34,0:33:55.87:0,56,953	1/1:6,3:11:21.05:353,21,0	0/0:31,0:28:66.69:0,67,999	0/0:22,0:20:45.42:0,45,722	0/1:5,1:7:99:176,0,165	1/1:4,2:6:7.74:155,8,0	1/1:13,2:10:4.79:44,5,0	0/0:13,0:13:9.03:0,9,166	0/0:14,0:14:7.34:0,7,113	0/0:31,0:30:72.25:0,72,1232	0/0:26,0:26:46.65:0,47,781	0/1:3,6:11:12.32:595,0,12	0/1:3,1:4:3.86:125,0,4	1/1:3,2:3:9.02:136,9,0
chr10	41795197	.	C	CAAGGGAA	6595.03	PASS	AB=0.955;AC=18;AF=0.346;AN=52;BaseQRankSum=1.839;DP=509;FS=4.155;HRun=0;HaplotypeScore=162.8365;InbreedingCoeff=0.7883;MQ=42.69;MQ0=35;MQRankSum=-10.404;QD=44.26;ReadPosRankSum=-6.190;VQSLOD=2.9456;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:25,2:21:10.71:597,11,0	0/0:10,0:9:18.06:0,18,458	./.	./.	1/1:12,0:12:26.94:422,27,0	0/0:21,0:20:32.88:0,33,823	0/0:25,0:20:24.65:0,25,709	0/1:9,0:6:66.70:67,0,246	0/0:17,0:17:39.09:0,39,808	0/0:31,0:24:63.21:0,63,1527	0/0:9,0:8:24.08:0,24,598	0/0:27,0:26:39.38:0,39,905	0/0:17,0:15:35.87:0,36,873	0/0:20,0:20:32.21:0,32,711	0/0:35,0:34:61.71:0,62,1478	1/1:21,0:21:52.37:1406,52,0	0/0:30,0:27:65.04:0,65,1291	0/0:22,0:20:50.23:0,50,1107	0/1:9,1:10:58.41:533,0,58	1/1:9,2:12:33.02:654,33,0	1/1:21,1:13:20.67:271,21,0	0/0:13,0:13:9.03:0,9,240	0/0:14,0:14:7.74:0,8,165	0/0:31,0:30:74.96:0,75,1749	0/0:25,0:25:46.36:0,46,1169	1/1:19,1:20:35.99:1774,36,0	1/1:10,0:8:17.97:608,18,0	1/1:5,0:3:9.03:262,9,0
chr10	41795680	.	GA	G	456.05	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.106;DP=611;FS=0.000;HRun=7;HaplotypeScore=56.7556;InbreedingCoeff=0.9972;MQ=81.11;MQ0=0;MQRankSum=-2.753;QD=24.00;ReadPosRankSum=1.025;VQSLOD=3.6854;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:78.25:0,78,981	0/0:12,0:12:33.11:0,33,415	0/0:18,0:17:32.49:0,32,441	0/0:17,0:17:30.91:0,31,411	0/0:26,0:26:72.21:0,72,886	0/0:26,0:26:72.23:0,72,906	0/0:20,0:20:57.17:0,57,703	0/0:26,0:26:75.23:0,75,932	0/0:16,0:16:45.14:0,45,566	0/0:19,0:19:45.14:0,45,558	0/0:27,0:27:78.23:0,78,957	0/0:25,0:25:75.22:0,75,919	0/0:18,0:18:51.14:0,51,619	0/0:19,0:19:51.16:0,51,641	0/0:17,0:17:45.14:0,45,566	0/0:13,0:13:39.11:0,39,476	1/1:0,19:19:54.12:551,54,0	0/0:10,0:10:30.10:0,30,375	0/0:16,0:16:42.12:0,42,508	0/0:36,0:36:99:0,105,1307	0/0:14,0:14:36.12:0,36,453	0/0:34,0:34:96.31:0,96,1207	0/0:21,0:21:63.20:0,63,792	0/0:21,0:21:54.17:0,54,679	0/0:33,0:33:96.30:0,96,1196	0/0:36,0:36:99:0,102,1246	0/0:36,0:35:99:0,105,1308	0/0:9,0:9:27.09:0,27,340
chr10	41796678	.	GT	G	6471.64	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=12.175;DP=610;FS=3.261;HRun=6;HaplotypeScore=60.7075;InbreedingCoeff=0.9975;MQ=85.70;MQ0=0;MQRankSum=-4.932;QD=27.31;ReadPosRankSum=0.321;VQSLOD=5.3066;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,26:29:75.15:794,75,0	0/0:9,0:9:27.09:0,27,355	0/0:27,0:27:66.59:0,67,777	0/0:17,0:17:48.06:0,48,575	1/1:0,18:18:54.12:567,54,0	0/0:24,0:24:72.22:0,72,932	0/0:31,0:31:84.27:0,84,1104	1/1:2,35:37:99:1062,102,0	0/0:17,0:17:51.17:0,51,670	0/0:22,0:22:63.20:0,63,826	0/0:23,0:23:66.20:0,66,850	0/0:26,0:26:75.23:0,75,959	0/0:24,0:24:69.21:0,69,879	0/0:24,0:24:69.22:0,69,905	0/0:19,0:19:54.13:0,54,689	1/1:1,18:19:54.14:580,54,0	0/0:17,0:17:48.16:0,48,631	0/0:15,0:15:42.09:0,42,533	1/1:6,17:23:51.10:538,51,0	1/1:1,22:23:63.16:675,63,0	1/1:4,28:32:75.18:806,75,0	0/0:19,0:19:54.18:0,54,709	0/0:20,0:20:60.12:0,60,726	0/0:18,0:18:48.14:0,48,616	0/0:21,0:21:60.20:0,60,789	1/1:1,24:25:72.18:772,72,0	1/1:5,16:21:48.12:516,48,0	1/1:0,10:10:15.04:161,15,0
chr10	41797604	.	G	GA	7914.49	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=7.316;DP=537;FS=0.333;HRun=2;HaplotypeScore=72.4174;InbreedingCoeff=0.9860;MQ=74.70;MQ0=0;MQRankSum=0.689;QD=38.99;ReadPosRankSum=0.093;VQSLOD=5.1675;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,16:16:42.14:604,42,0	0/0:6,0:6:18.06:0,18,223	0/0:14,0:14:13.67:0,14,240	0/0:6,0:6:8.83:0,9,95	1/1:1,23:24:69.19:970,69,0	0/0:26,0:26:72.23:0,72,892	0/0:13,0:13:39.09:0,39,457	1/1:3,22:25:66.19:898,66,0	0/0:19,0:19:54.15:0,54,646	0/0:28,0:28:84.26:0,84,1039	0/0:22,0:22:66.21:0,66,817	0/0:25,0:25:72.21:0,72,878	0/0:27,0:27:78.24:0,78,966	0/0:29,0:29:87.25:0,87,1047	0/0:15,0:15:45.13:0,45,547	1/1:1,14:15:42.14:605,42,0	0/0:25,0:25:72.23:0,72,891	0/0:8,0:8:21.07:0,21,260	1/1:1,17:18:54.18:764,54,0	1/1:1,31:32:90.26:1272,90,0	1/1:1,15:16:39.13:561,39,0	0/0:24,0:24:66.14:0,66,776	0/0:15,0:15:42.13:0,42,520	0/0:13,0:13:33:0,33,375	0/0:19,0:19:45.11:0,45,521	1/1:0,15:15:45.15:647,45,0	1/1:0,27:27:69.23:991,69,0	1/1:0,15:15:42.14:604,42,0
chr10	41797893	.	GACAT	G	5880.39	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=12.039;DP=749;FS=0.000;HRun=0;HaplotypeScore=124.8542;InbreedingCoeff=0.9862;MQ=89.38;MQ0=0;MQRankSum=-3.289;QD=50.69;ReadPosRankSum=3.685;VQSLOD=5.5474;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,141,3943	0/0:11,0:11:33.11:0,33,955	0/0:28,0:28:84.29:0,84,2363	0/0:30,0:30:87.24:0,87,2145	0/0:25,0:25:72.22:0,72,1961	0/0:21,0:21:63.22:0,63,1823	0/0:22,0:22:66.23:0,66,1900	0/0:37,0:37:99:0,108,3048	0/0:36,0:36:99:0,108,3114	1/1:0,26:26:75.26:1545,75,0	1/1:0,18:18:36.12:754,36,0	0/0:32,0:32:96.33:0,96,2779	0/0:35,0:35:99:0,105,3042	0/0:28,0:28:84.28:0,84,2373	1/1:0,33:33:81.23:1654,81,0	0/0:30,0:30:90.30:0,90,2546	0/0:23,0:23:69.24:0,69,2000	1/1:0,9:9:21.07:440,21,0	0/0:23,0:23:69.24:0,69,2010	0/0:29,0:29:87.30:0,87,2507	0/0:37,0:37:99:0,108,3061	0/0:27,0:27:75.25:0,75,2029	0/0:21,0:21:63.22:0,63,1763	0/0:28,0:28:84.27:0,84,2342	1/1:0,30:30:72.25:1487,72,0	0/0:23,1:24:9.30:0,9,1936	0/0:29,0:29:87.30:0,87,2472	0/0:10,0:10:30.10:0,30,869
chr10	41799622	.	A	AC	9222.78	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=1.316;DP=586;FS=0.664;HRun=1;HaplotypeScore=120.7030;InbreedingCoeff=0.9956;MQ=63.87;MQ0=0;MQRankSum=-9.810;QD=39.75;ReadPosRankSum=-0.592;VQSLOD=4.3332;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,15:18:39.13:583,39,0	0/0:8,0:8:24.08:0,24,312	0/0:26,0:23:63.18:0,63,800	0/0:26,0:22:63.20:0,63,805	1/1:1,24:25:72.24:1071,72,0	0/0:19,0:19:48.16:0,48,620	0/0:10,0:10:27.09:0,27,349	1/1:3,39:42:99:1752,117,0	0/0:22,0:22:63.19:0,63,800	0/0:33,0:33:99:0,99,1281	0/0:22,0:22:66.21:0,66,862	0/0:19,0:19:51.15:0,51,647	0/0:15,0:15:45.15:0,45,584	0/0:23,0:23:66.20:0,66,842	0/0:24,0:24:72.23:0,72,934	1/1:4,16:20:60.14:841,60,0	0/0:12,0:12:27.09:0,27,350	0/0:8,0:8:18.06:0,18,240	1/1:4,17:21:51.17:746,51,0	1/1:0,31:30:81.27:1210,81,0	1/1:4,6:10:27.09:390,27,0	0/0:25,0:25:75.24:0,75,973	0/0:27,0:27:72.23:0,72,932	0/0:15,0:15:42.08:0,42,510	0/0:20,0:20:57.19:0,57,750	1/1:6,21:27:36.79:1010,37,0	1/1:2,30:31:96.32:1419,96,0	1/1:0,5:5:15.02:201,15,0
chr10	41799633	.	TTTTG	T	4240.95	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=5.868;DP=587;FS=17.927;HRun=0;HaplotypeScore=182.1863;InbreedingCoeff=0.5786;MQ=63.54;MQ0=2;MQRankSum=-5.237;QD=16.06;ReadPosRankSum=1.535;VQSLOD=3.5817;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:24:34.66:0,35,431	0/0:10,0:10:24.08:0,24,495	0/0:28,0:22:24.07:0,24,413	0/0:27,0:21:3.91:0,4,517	0/0:28,0:28:33.55:0,34,626	0/0:22,0:22:45.15:0,45,1110	0/0:8,0:8:21.06:0,21,441	0/1:47,0:46:69.28:69,0,90	0/0:21,0:21:54:0,54,1164	1/1:13,20:33:69.65:1327,70,0	1/1:9,12:21:48.16:792,48,0	0/0:19,0:19:45.15:0,45,1046	0/0:17,0:17:42.14:0,42,998	0/0:23,0:23:54.18:0,54,1287	1/1:9,13:22:57.17:871,57,0	0/0:21,0:21:45.34:0,45,539	0/0:14,0:14:19.20:0,19,520	1/1:4,5:9:21.07:349,21,0	0/1:19,0:19:15.84:40,0,16	0/1:28,0:27:13.49:31,0,13	1/1:6,0:6:3:27,3,0	0/0:24,0:24:60.21:0,60,1383	0/0:26,0:26:63.20:0,63,1501	0/0:10,0:10:18.06:0,18,347	1/1:9,9:18:39.13:647,39,0	0/1:26,0:26:31.29:31,0,72	1/1:30,0:30:6.47:54,6,0	0/1:5,0:5:1.36:1,0,4
chr10	41799647	.	TTG	T	2865.68	PASS	AB=0.995;AC=23;AF=0.411;AN=56;BaseQRankSum=14.130;DP=584;FS=12.039;HRun=0;HaplotypeScore=170.8918;InbreedingCoeff=0.4540;MQ=57.70;MQ0=2;MQRankSum=-10.405;QD=8.33;ReadPosRankSum=1.525;VQSLOD=2.5889;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:26,1:26:54.59:55,0,81	0/0:8,0:8:24.08:0,24,427	0/0:19,0:12:17.30:0,17,406	0/0:24,0:15:6.25:0,6,446	0/1:28,0:28:67.36:67,0,104	0/0:21,0:21:51.17:0,51,890	0/0:12,0:11:30.08:0,30,443	1/1:37,3:39:93.88:430,94,0	0/0:22,0:22:61.41:0,61,948	0/1:33,0:33:30.95:456,0,31	0/1:26,0:26:99:237,0,143	0/0:21,0:21:57.17:0,57,931	0/0:19,0:19:54.15:0,54,869	0/0:21,0:21:57.19:0,57,999	1/1:20,0:20:17.22:287,17,0	0/1:19,0:19:2.09:2,0,106	0/0:15,0:15:23.31:0,23,490	0/1:15,0:15:90.44:90,0,157	1/1:20,0:18:39.33:167,39,0	1/1:29,0:25:61.92:312,62,0	1/1:3,1:4:10.21:52,10,0	0/0:23,0:23:69.23:0,69,1168	0/0:25,0:25:66.16:0,66,1114	0/0:10,0:10:27.05:0,27,363	0/1:16,0:16:37.62:186,0,38	1/1:29,2:31:76.90:348,77,0	1/1:29,0:29:74.56:328,75,0	1/1:7,0:7:1.98:46,2,0
chr10	41799648	.	TG	T	6820.48	PASS	AB=0.964;AC=22;AF=0.393;AN=56;BaseQRankSum=10.440;DP=580;FS=14.626;HRun=1;HaplotypeScore=147.2799;InbreedingCoeff=0.5389;MQ=57.84;MQ0=2;MQRankSum=-8.186;QD=21.25;ReadPosRankSum=0.116;VQSLOD=3.4757;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:25:10.82:11,0,68	0/0:8,0:8:24.08:0,24,342	0/0:18,1:12:26:0,26,337	0/0:21,2:14:15.21:0,15,366	0/1:26,1:27:66.29:66,0,79	0/0:20,0:20:50.85:0,51,712	0/0:12,0:11:30.06:0,30,364	1/1:11,29:39:99:1446,114,0	0/0:22,0:22:49.54:0,50,751	0/1:32,1:33:30.93:395,0,31	0/1:24,1:25:99:196,0,137	0/0:21,0:21:57.14:0,57,745	0/0:19,0:19:57.14:0,57,734	0/0:21,0:21:57.19:0,57,798	1/1:20,0:20:20.49:267,20,0	0/0:19,0:19:10.70:0,11,101	0/0:15,0:15:18.01:0,18,375	0/1:15,1:16:77.40:77,0,150	1/1:4,16:18:48.07:597,48,0	1/1:1,26:23:69.22:925,69,0	1/1:4,0:4:12.03:146,12,0	0/0:24,0:24:72.21:0,72,969	0/0:26,0:26:66.08:0,66,885	0/0:10,0:10:26.98:0,27,280	0/1:16,1:17:56.12:157,0,56	1/1:8,24:32:96.06:1184,96,0	1/1:5,24:29:87.28:1174,87,0	1/1:2,3:5:14.88:180,15,0
chr10	41799656	.	G	GT	7032.95	PASS	AB=0.939;AC=36;AF=0.643;AN=56;BaseQRankSum=-13.780;DP=582;FS=9.466;HRun=10;HaplotypeScore=140.5218;InbreedingCoeff=0.3970;MQ=57.45;MQ0=2;MQRankSum=7.441;QD=15.16;ReadPosRankSum=0.854;VQSLOD=3.7645;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:27:29.35:0,29,88	0/0:7,0:7:11.96:0,12,96	0/0:20,0:10:17.11:0,17,122	0/1:20,0:10:19.06:19,0,37	0/0:24,0:24:23.24:0,23,78	1/1:0,24:24:54.14:576,54,0	1/1:1,9:10:26.90:270,27,0	0/1:36,0:35:24.84:37,0,25	1/1:6,16:22:23.07:433,23,0	1/1:8,23:31:47.75:692,48,0	1/1:5,22:27:19.48:577,19,0	1/1:2,21:23:51.13:543,51,0	1/1:3,16:19:26.48:482,26,0	1/1:5,18:23:43.35:451,43,0	1/1:2,16:18:45.10:465,45,0	0/1:16,1:17:2.52:3,0,47	1/1:1,13:14:27.07:288,27,0	0/1:4,12:16:1.20:386,0,1	0/1:21,0:19:26.21:29,0,26	0/1:27,0:22:24.27:24,0,35	0/1:4,0:4:0.91:28,0,1	1/1:5,20:25:32.50:551,32,0	1/1:3,25:28:21.72:620,22,0	1/1:1,7:8:15.04:160,15,0	1/1:4,12:16:33.02:334,33,0	0/1:34,0:34:42.09:64,0,42	0/0:33,0:33:3.47:0,3,73	0/0:6,0:6:2.86:0,3,18
chr10	41799658	.	T	TG	1373.59	PASS	AB=0.964;AC=26;AF=0.464;AN=56;BaseQRankSum=-8.947;DP=586;FS=3.390;HRun=0;HaplotypeScore=160.6213;InbreedingCoeff=-0.2847;MQ=57.51;MQ0=2;MQRankSum=7.145;QD=2.94;ReadPosRankSum=6.510;VQSLOD=2.9149;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:27:40.58:0,41,353	0/0:7,0:7:21.03:0,21,242	0/0:21,0:10:22.62:0,23,245	0/0:19,0:9:3.01:0,3,204	0/0:26,0:26:42.36:0,42,453	1/1:24,0:24:34.04:99,34,0	0/1:11,0:10:1.20:19,0,1	0/1:31,4:34:99:206,0,225	0/1:21,0:21:48.71:49,0,88	0/1:31,0:31:62.39:62,0,77	0/1:29,0:29:37.83:38,0,137	1/1:23,0:23:8.64:63,9,0	0/1:19,0:19:30.85:31,0,38	0/1:24,0:24:22.21:22,0,93	1/1:18,0:18:5.96:46,6,0	0/0:18,0:18:45.35:0,45,375	0/1:14,0:14:3.83:42,0,4	0/1:16,0:16:49.03:49,0,53	0/1:18,1:17:67.30:123,0,67	0/1:29,0:23:94.24:94,0,120	1/1:1,3:4:0.48:75,0,0	0/1:23,0:23:43.34:43,0,75	0/1:29,0:29:61.81:66,0,62	0/1:9,0:9:9.93:10,0,36	0/1:15,0:15:20.99:21,0,38	0/1:32,2:34:99:232,0,121	0/1:26,8:34:79.11:122,0,79	0/1:4,2:6:2.34:25,0,2
chr10	41799665	.	TTA	T	6890.09	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=9.082;DP=587;FS=9.486;HRun=0;HaplotypeScore=142.7972;InbreedingCoeff=0.9545;MQ=58.92;MQ0=3;MQRankSum=-10.075;QD=31.04;ReadPosRankSum=-0.682;VQSLOD=6.4816;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,24:25:53.99:669,54,0	0/0:4,0:4:12.04:0,12,200	0/0:20,0:11:26.35:0,26,282	0/0:16,0:6:17.73:0,18,240	1/1:2,26:28:54.04:718,54,0	0/0:25,0:25:57.17:0,57,690	0/0:12,0:11:30.09:0,30,359	1/1:11,16:25:72.20:938,72,0	0/0:21,0:21:57.12:0,57,668	0/0:27,0:27:80.57:0,81,815	0/0:35,0:35:99:0,105,1105	0/0:25,0:25:63.15:0,63,720	0/0:20,0:20:57.17:0,57,703	0/0:22,0:22:54.11:0,54,613	0/0:23,0:23:62.26:0,62,588	1/1:2,14:16:5.27:517,5,0	0/0:14,0:14:30.08:0,30,356	0/0:17,0:17:10.76:0,11,502	1/1:6,13:17:45.12:581,45,0	1/1:3,23:20:60.08:773,60,0	1/1:5,1:6:18.04:214,18,0	0/0:28,0:28:84.12:0,84,961	0/0:29,0:29:75.22:0,75,938	0/0:9,0:9:21.06:0,21,251	0/0:17,0:17:47.62:0,48,470	1/1:4,29:33:42.78:1107,43,0	1/1:12,23:35:93.26:1235,93,0	1/1:3,3:6:6.84:138,7,0
chr10	41799885	.	TA	T	8724.93	PASS	AB=0.519;AC=19;AF=0.339;AN=56;BaseQRankSum=18.573;DP=559;FS=0.000;HRun=1;HaplotypeScore=94.9994;InbreedingCoeff=0.9094;MQ=61.10;MQ0=1;MQRankSum=-0.294;QD=37.45;ReadPosRankSum=0.635;VQSLOD=4.9424;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,22:24:66.22:919,66,0	0/0:5,0:5:15.05:0,15,240	0/0:16,0:14:41.88:0,42,624	0/0:15,0:14:34.55:0,35,518	1/1:0,18:18:42.14:586,42,0	0/0:16,0:16:48.16:0,48,767	0/0:9,0:9:27.09:0,27,432	1/1:0,28:27:72.23:991,72,0	0/0:25,0:25:72.23:0,72,1128	0/0:22,0:22:66.22:0,66,1035	0/0:20,0:20:60.19:0,60,936	0/0:23,0:23:66.21:0,66,1032	0/0:23,0:23:66.21:0,66,1024	0/0:14,0:14:42.14:0,42,671	0/0:29,0:29:87.30:0,87,1391	1/1:2,18:20:9.21:691,9,0	0/0:19,0:19:51.17:0,51,805	0/0:5,0:5:15.05:0,15,229	1/1:0,20:16:48.16:671,48,0	1/1:1,30:31:93.31:1300,93,0	1/1:0,25:25:72.24:1007,72,0	0/0:19,0:19:57.19:0,57,910	0/0:18,0:18:54.18:0,54,853	0/0:21,0:21:54.18:0,54,863	0/0:27,0:27:81.25:0,81,1270	0/1:2,25:27:14.65:966,0,15	1/1:0,29:29:81.27:1132,81,0	1/1:0,11:11:33.11:461,33,0
chr10	41799964	.	G	GA	10171.30	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=4.488;DP=707;FS=7.192;HRun=4;HaplotypeScore=110.4630;InbreedingCoeff=0.9912;MQ=59.15;MQ0=4;MQRankSum=-2.333;QD=34.36;ReadPosRankSum=-0.664;VQSLOD=3.7833;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,23:27:69.02:914,69,0	0/0:3,0:3:9.03:0,9,101	0/0:22,0:20:53.69:0,54,573	0/0:29,0:21:29.67:0,30,558	1/1:5,36:40:99:1362,102,0	0/0:25,0:25:72.21:0,72,816	0/0:20,0:20:45.13:0,45,510	1/1:5,38:39:99:1440,108,0	0/0:29,0:29:81.23:0,81,918	0/0:30,0:30:90.25:0,90,1013	0/0:36,0:36:99:0,105,1181	0/0:23,0:23:63.16:0,63,703	0/0:25,0:25:66.14:0,66,719	0/0:13,0:13:36.09:0,36,399	0/0:34,0:34:99:0,102,1157	1/1:4,30:34:93.31:1263,93,0	0/0:20,0:20:60.17:0,60,680	0/0:13,0:13:36.06:0,36,385	1/1:3,14:15:42.14:575,42,0	1/1:3,28:30:81.27:1106,81,0	1/1:1,19:20:57.19:780,57,0	0/0:23,0:23:69.17:0,69,765	0/0:27,0:27:69.07:0,69,782	0/0:17,0:17:42.10:0,42,466	0/0:21,0:22:48.81:0,49,635	1/1:4,28:32:87.26:1145,87,0	1/1:7,31:38:84.24:1094,84,0	1/1:0,13:13:36.12:492,36,0
chr10	41800017	.	TAGA	T	9205.30	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-4.479;DP=686;FS=1.031;HRun=0;HaplotypeScore=144.8362;InbreedingCoeff=0.9748;MQ=57.53;MQ0=6;MQRankSum=2.668;QD=41.47;ReadPosRankSum=3.125;VQSLOD=5.8791;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:72.20:0,72,1541	0/0:7,0:7:21.07:0,21,469	0/0:11,0:2:6.02:0,6,115	0/0:19,0:7:11.53:0,12,201	0/0:41,0:41:93.32:0,93,2032	1/1:0,26:26:72.25:1174,72,0	1/1:0,21:20:51.17:830,51,0	0/0:29,0:27:60.16:0,60,1275	1/1:2,31:33:87.30:1419,87,0	0/0:29,0:29:78.26:0,78,1705	0/0:31,0:31:90.31:0,90,1999	1/1:1,19:20:57.19:930,57,0	1/1:2,20:22:48.16:783,48,0	1/1:1,16:17:45.15:733,45,0	0/0:35,0:35:99:0,102,2254	0/0:26,0:26:66.23:0,66,1428	0/0:21,0:21:60.21:0,60,1339	0/0:15,0:14:42.09:0,42,826	0/0:15,0:13:36.11:0,36,753	0/0:40,0:34:90.31:0,90,1953	0/0:12,0:12:30.06:0,30,590	1/1:0,28:28:75.26:1223,75,0	1/1:2,31:33:84.07:1367,84,0	1/1:1,21:22:14.35:746,14,0	0/0:20,0:20:60.21:0,60,1340	0/0:31,0:31:87.30:0,87,1896	0/0:36,0:36:66.23:0,66,1431	0/0:16,0:15:42.14:0,42,928
chr10	41801027	.	G	GA	2410.12	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-10.601;DP=690;FS=1.506;HRun=7;HaplotypeScore=63.3771;InbreedingCoeff=0.9687;MQ=62.45;MQ0=0;MQRankSum=0.475;QD=27.70;ReadPosRankSum=0.995;VQSLOD=4.4116;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,27:32:75.03:922,75,0	0/0:8,0:8:24.04:0,24,232	0/0:15,0:11:12.96:0,13,215	0/0:8,0:6:9.01:0,9,87	1/1:3,17:20:45.14:544,45,0	0/0:22,0:21:51.07:0,51,487	0/0:13,0:13:33.05:0,33,318	0/0:28,0:28:69.09:0,69,658	0/0:28,0:27:78.12:0,78,753	0/0:36,0:36:99:0,99,956	0/0:29,0:29:75.11:0,75,724	0/0:23,0:23:66.11:0,66,637	0/0:25,0:25:63.06:0,63,596	0/0:29,0:29:84.14:0,84,811	0/0:37,0:37:99:0,102,979	1/1:2,32:34:90.28:1087,90,0	0/0:22,0:22:51.07:0,51,492	0/0:24,0:24:63.10:0,63,608	0/0:11,0:10:24.04:0,24,232	0/0:36,0:36:99:0,99,949	0/0:19,0:19:54.06:0,54,515	0/0:25,0:25:75.10:0,75,718	0/0:29,0:29:75.11:0,75,724	0/0:16,0:16:48.08:0,48,464	0/0:31,0:31:81.13:0,81,782	0/0:39,0:39:99:0,102,985	0/0:41,0:41:99:0,108,1037	0/0:9,0:9:24.04:0,24,232
chr10	41801720	.	A	AT	7268.90	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=-1.693;DP=555;FS=22.385;HRun=2;HaplotypeScore=74.5349;InbreedingCoeff=0.9389;MQ=66.65;MQ0=3;MQRankSum=-0.586;QD=26.53;ReadPosRankSum=1.406;VQSLOD=3.3333;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:30,1:32:63.75:614,64,0	0/0:5,0:5:15.05:0,15,185	0/1:17,0:9:2.67:3,0,119	0/0:18,0:10:13.94:0,14,142	1/1:32,1:33:86.97:820,87,0	0/0:24,0:24:61.38:0,61,771	0/0:15,0:15:36.56:0,37,450	1/1:5,15:18:45:527,45,0	0/0:15,0:15:42.10:0,42,502	0/0:21,0:21:62.77:0,63,492	0/0:14,0:13:32.63:0,33,243	0/0:18,0:18:54.14:0,54,632	0/0:20,0:20:60.12:0,60,680	0/0:27,0:27:81.16:0,81,924	0/0:20,0:20:53.75:0,54,410	1/1:11,1:12:30.04:287,30,0	1/1:24,0:24:66.74:405,67,0	0/0:21,0:22:58.05:0,58,417	1/1:3,14:16:43.35:548,43,0	1/1:5,30:35:87.21:1187,87,0	1/1:0,6:6:12.04:172,12,0	0/0:7,0:7:18.05:0,18,208	0/0:17,0:17:45.14:0,45,555	0/0:17,0:17:47.90:0,48,550	0/0:21,0:21:56.74:0,57,439	1/1:2,35:37:85.75:1319,86,0	1/1:4,30:34:83.05:1186,83,0	1/1:2,5:7:15.04:200,15,0
chr10	41801722	.	TA	T	2233.95	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=-2.565;DP=553;FS=6.209;HRun=10;HaplotypeScore=90.9608;InbreedingCoeff=0.8986;MQ=67.64;MQ0=3;MQRankSum=-0.210;QD=15.84;ReadPosRankSum=1.918;VQSLOD=4.0461;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:3,0:32:59.81:0,60,284	0/0:5,0:5:15.03:0,15,157	0/1:19,0:10:2.57:3,0,116	0/0:18,0:10:19.77:0,20,159	0/0:1,0:35:79.20:0,79,389	0/0:24,0:25:66:0,66,704	0/0:14,1:15:9.87:0,10,319	0/0:17,0:15:35.49:0,35,243	0/0:16,0:16:45.08:0,45,478	1/1:4,16:21:50.02:422,50,0	1/1:3,10:12:26.99:234,27,0	0/0:18,0:18:51.14:0,51,563	0/0:20,0:20:54.14:0,54,590	0/0:28,0:28:72.16:0,72,771	1/1:3,16:19:44.98:391,45,0	0/0:1,0:12:27.98:0,28,131	1/1:3,22:25:65.56:548,66,0	1/1:4,18:22:40.13:406,40,0	0/0:18,0:17:47.14:0,47,317	0/0:31,0:32:85.22:0,85,535	0/0:6,0:6:11.75:0,12,70	0/0:7,0:7:8.10:0,8,157	0/0:16,0:16:48.11:0,48,522	0/0:17,0:17:44.62:0,45,496	1/1:3,19:22:47.99:417,48,0	0/0:34,1:35:65.16:0,65,524	0/0:33,0:34:90.93:0,91,554	0/0:5,0:6:14.51:0,15,83
chr10	41802506	.	CCT	C	10846.17	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-5.995;DP=456;FS=4.147;HRun=0;HaplotypeScore=68.7777;InbreedingCoeff=0.9519;MQ=80.44;MQ0=0;MQRankSum=-4.804;QD=26.52;ReadPosRankSum=3.246;VQSLOD=5.9474;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:14,16:30:77:939,77,0	0/0:4,0:4:12.01:0,12,179	0/0:16,0:17:28.67:0,29,538	0/0:11,0:10:27.09:0,27,439	1/1:6,15:21:51.15:691,51,0	1/1:16,0:16:9.73:34,10,0	1/1:20,0:20:24.83:85,25,0	1/1:2,14:16:36.06:439,36,0	1/1:7,28:35:99:1318,101,0	1/1:2,12:14:32.96:422,33,0	1/1:3,9:12:27.04:359,27,0	1/1:24,1:25:44.32:187,44,0	1/1:2,17:19:42.14:597,42,0	1/1:15,0:15:30.09:134,30,0	1/1:1,14:15:39.13:555,39,0	1/1:3,14:17:45.11:618,45,0	0/0:15,0:15:20.40:0,20,201	1/1:0,8:8:21.07:299,21,0	1/1:1,12:13:38.95:440,39,0	1/1:2,9:11:14.64:179,15,0	1/1:2,27:29:63.17:873,63,0	1/1:2,8:10:24.08:341,24,0	1/1:6,1:7:10.25:68,10,0	1/1:17,0:17:21.43:131,21,0	1/1:2,7:9:21.07:299,21,0	1/1:3,13:16:42.05:501,42,0	1/1:8,20:28:81.14:1082,81,0	1/1:1,5:6:18.06:256,18,0
chr10	41802507	.	CT	C	7057.20	PASS	AB=0.882;AC=49;AF=0.875;AN=56;BaseQRankSum=-1.542;DP=446;FS=0.000;HRun=1;HaplotypeScore=73.2245;InbreedingCoeff=0.7974;MQ=80.87;MQ0=0;MQRankSum=-4.919;QD=17.05;ReadPosRankSum=3.151;VQSLOD=5.1328;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:25,2:28:76.16:474,76,0	0/0:4,0:4:12.01:0,12,147	0/0:16,1:17:27.14:0,27,435	0/0:11,0:10:27.08:0,27,353	1/1:20,0:20:49.84:301,50,0	1/1:1,13:14:12.04:167,12,0	1/1:0,20:20:30.10:417,30,0	1/1:14,1:15:33.24:208,33,0	1/1:34,1:35:99:603,100,0	1/1:12,1:13:32.11:187,32,0	1/1:9,3:12:26.06:152,26,0	1/1:1,24:25:54.09:725,54,0	1/1:17,1:18:40.94:233,41,0	1/1:0,15:15:36.12:489,36,0	1/1:14,1:15:38.04:218,38,0	1/1:15,1:16:43.84:254,44,0	0/1:13,2:15:27.59:82,0,28	1/1:8,0:8:20.47:117,20,0	1/1:12,0:13:38.01:232,38,0	1/1:9,2:11:14.27:75,14,0	1/1:28,1:29:61.47:354,61,0	1/1:10,0:10:23.40:133,23,0	1/1:1,6:7:11.95:141,12,0	1/1:4,13:17:44.38:553,44,0	1/1:9,0:9:20.47:116,20,0	1/1:13,2:15:41.23:268,41,0	1/1:22,6:28:79.04:459,79,0	1/1:5,1:6:17.55:100,18,0
chr10	41802664	.	G	GA	1813.78	PASS	AB=0.783;AC=7;AF=0.125;AN=56;BaseQRankSum=-8.108;DP=611;FS=5.164;HRun=9;HaplotypeScore=58.8080;InbreedingCoeff=0.4891;MQ=78.43;MQ0=0;MQRankSum=-0.784;QD=17.78;ReadPosRankSum=-1.755;VQSLOD=3.2399;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,20:25:57.15:625,57,0	0/1:7,1:9:7.15:7,0,162	0/0:20,0:18:33.60:0,34,308	0/0:12,0:11:11.13:0,11,124	0/1:10,28:39:8.12:784,0,8	0/0:21,0:21:50.98:0,51,443	0/0:18,0:18:50.94:0,51,434	0/0:26,0:26:19.22:0,19,449	0/0:25,0:26:71.90:0,72,610	0/0:31,1:32:44.79:0,45,613	0/0:24,0:25:64.77:0,65,539	0/0:18,0:18:47.99:0,48,417	0/0:22,0:22:56.98:0,57,495	0/0:27,0:27:77.94:0,78,669	0/0:12,0:12:32.93:0,33,276	1/1:2,20:22:5.06:512,5,0	0/0:2,0:16:26.48:0,26,78	0/1:6,1:7:18.18:18,0,89	0/0:22,1:23:17.75:0,18,375	0/0:38,0:38:58.57:0,59,724	0/0:9,0:9:17.99:0,18,156	0/0:15,0:15:29.98:0,30,260	0/0:30,0:30:86.98:0,87,755	0/0:23,0:23:50.98:0,51,440	0/0:16,1:17:14.81:0,15,357	0/0:37,0:37:98.96:0,99,855	0/0:28,0:28:71.95:0,72,620	0/0:13,0:13:38.99:0,39,338
chr10	41804464	.	T	TA	3818.65	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-14.025;DP=507;FS=4.943;HRun=7;HaplotypeScore=55.5641;InbreedingCoeff=0.9812;MQ=79.90;MQ0=0;MQRankSum=-1.638;QD=29.15;ReadPosRankSum=-0.710;VQSLOD=4.0288;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:63.10:0,63,608	0/0:10,0:10:24.03:0,24,232	0/0:12,0:13:13.82:0,14,185	0/0:14,0:14:14.26:0,14,212	0/0:18,0:19:53.11:0,53,493	0/0:18,0:18:51.08:0,51,492	0/0:18,0:18:51.08:0,51,493	1/1:4,15:19:45.14:544,45,0	0/0:19,0:19:54.09:0,54,521	0/0:17,0:17:45.05:0,45,424	0/0:14,0:14:36.06:0,36,348	0/0:20,0:20:54.08:0,54,521	0/0:21,0:21:57.09:0,57,550	0/0:16,0:16:42.06:0,42,406	0/0:8,0:8:24.04:0,24,231	0/0:23,0:23:63.10:0,63,608	0/0:20,0:20:54.09:0,54,521	0/0:23,0:23:54.07:0,54,521	1/1:4,16:20:48.09:537,48,0	1/1:4,16:20:48.11:564,48,0	1/1:1,11:12:30.09:362,30,0	0/0:19,0:19:54.06:0,54,511	0/0:32,0:32:84.32:0,84,830	0/0:11,0:11:30.04:0,30,288	0/0:17,0:17:39.04:0,39,372	1/1:5,22:27:66.20:797,66,0	1/1:0,29:29:75.23:906,75,0	1/1:0,4:4:9.03:109,9,0
chr10	41806919	.	AGCACGCGC	A	1843.59	PASS	AB=0.971;AC=15;AF=0.268;AN=56;BaseQRankSum=9.490;DP=534;FS=9.399;HRun=0;HaplotypeScore=244.3080;InbreedingCoeff=0.0823;MQ=55.25;MQ0=0;MQRankSum=-9.743;QD=7.37;ReadPosRankSum=-0.438;VQSLOD=0.8470;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:10,9:21:21.41:374,21,0	0/0:13,0:13:39.12:0,39,1309	0/0:9,0:8:18.04:0,18,219	0/1:8,0:6:3.20:3,0,53	1/1:0,14:16:0.47:1,0,0	0/1:20,0:20:10.59:11,0,273	0/0:26,0:26:52.44:0,52,784	0/0:19,0:19:51.13:0,51,1028	0/1:20,0:20:29.02:29,0,284	0/1:27,0:27:16.81:17,0,228	0/0:15,0:15:3.74:0,4,85	0/1:30,0:30:99:140,0,374	0/1:19,0:19:62.62:63,0,336	0/0:23,0:23:3.43:0,3,555	0/1:28,0:28:32.73:33,0,267	1/1:5,4:9:21.07:528,21,0	0/1:15,8:23:52.35:768,0,52	0/0:17,0:16:27.05:0,27,335	0/0:16,0:16:45.05:0,45,926	0/0:19,0:19:32.04:0,32,763	0/0:20,0:20:27.08:0,27,777	0/0:14,0:15:4.92:0,5,245	0/0:24,0:25:23.86:0,24,352	0/0:26,0:26:37.38:0,37,677	0/1:28,0:28:35.29:35,0,138	0/0:21,0:21:62.84:0,63,1380	0/0:7,0:6:8.33:0,8,183	0/0:13,0:13:32.97:0,33,672
chr10	41806936	.	GCACGCACACACACACACACACA	G	10325.58	PASS	AB=1.000;AC=22;AF=0.393;AN=56;BaseQRankSum=8.697;DP=553;FS=1.575;HRun=0;HaplotypeScore=284.4405;InbreedingCoeff=0.1048;MQ=47.27;MQ0=1;MQRankSum=-7.699;QD=29.00;ReadPosRankSum=6.222;VQSLOD=3.1317;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:27:9.27:0,9,511	0/0:10,0:10:27:0,27,1971	0/1:2,0:2:0.82:1,0,236	0/1:7,0:3:0.74:1,0,222	0/0:21,0:21:8.69:0,9,766	0/1:23,0:23:23.93:413,0,24	0/1:25,0:25:99:178,0,170	0/0:20,0:20:45.13:0,45,847	0/1:25,0:25:56.06:671,0,56	1/1:1,25:26:52.47:2128,52,0	1/1:0,13:13:3.17:182,3,0	0/1:33,0:33:28.80:1591,0,29	0/1:18,0:18:39.90:699,0,40	0/1:16,0:16:63.92:296,0,64	1/1:1,27:28:27.09:1514,27,0	0/0:16,0:16:12:0,12,1101	0/1:25,0:25:32.38:32,0,1695	1/1:6,2:19:23.97:799,24,0	0/0:13,0:13:23.62:0,24,507	0/0:19,0:19:20.80:0,21,389	0/0:24,0:23:15.04:0,15,391	0/1:16,0:16:25.96:97,0,26	0/1:24,0:24:92.17:92,0,127	0/1:24,0:24:99:186,0,121	1/1:0,31:32:27.09:1448,27,0	0/0:20,0:20:30.96:0,31,1053	0/0:10,0:9:14.92:0,15,210	0/0:16,0:16:27.05:0,27,626
chr10	41806940	.	GCACACACACACACACACACA	G	11313.09	PASS	AB=0.615;AC=27;AF=0.482;AN=56;BaseQRankSum=5.191;DP=556;FS=5.481;HRun=0;HaplotypeScore=260.0537;InbreedingCoeff=0.7292;MQ=47.28;MQ0=3;MQRankSum=-6.931;QD=35.24;ReadPosRankSum=4.777;VQSLOD=3.2443;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:26:11.14:0,11,515	0/0:12,0:12:27.09:0,27,2141	0/0:4,0:2:3.01:0,3,241	0/0:11,0:3:3.01:0,3,222	0/0:22,0:22:11.50:0,12,944	1/1:7,16:23:15.05:714,15,0	1/1:15,11:26:6.02:321,6,0	0/0:9,0:18:36.11:0,36,749	1/1:8,17:25:20.87:1100,21,0	1/1:25,0:25:14.14:1478,14,0	1/1:13,0:13:3.17:137,3,0	1/1:8,23:31:48.16:2550,48,0	1/1:6,10:17:21.07:1105,21,0	1/1:7,11:18:9.03:486,9,0	1/1:27,0:27:27.09:1106,27,0	0/0:14,0:15:18.06:0,18,1089	0/0:26,0:26:34.98:0,35,1916	1/1:17,0:16:15.02:563,15,0	0/0:9,0:11:1.28:0,1,324	0/0:8,0:19:10.99:0,11,202	0/0:16,0:23:9.02:0,9,171	1/1:5,14:20:3.01:162,3,0	0/1:9,14:24:40.03:201,0,40	1/1:9,14:23:6.02:322,6,0	1/1:32,0:32:27.09:1067,27,0	0/0:9,0:19:32.99:0,33,615	0/0:3,0:10:11.83:0,12,132	0/0:5,0:15:23.91:0,24,339
chr10	41806975	.	C	CAT	202.62	PASS	AB=0.729;AC=5;AF=0.089;AN=56;BaseQRankSum=0.642;DP=586;FS=7.896;HRun=0;HaplotypeScore=187.6991;InbreedingCoeff=0.3210;MQ=63.64;MQ0=4;MQRankSum=-0.054;QD=2.11;ReadPosRankSum=-0.220;VQSLOD=2.0423;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:9,26:36:10.89:50,0,11	0/0:12,0:12:29.98:0,30,319	0/0:34,0:22:49.34:0,49,486	0/0:35,0:22:32.63:0,33,372	1/1:18,3:21:13.78:199,14,0	0/0:21,0:21:29.67:0,30,214	0/0:15,0:15:14.94:0,15,115	0/0:20,0:20:53.72:0,54,420	0/0:18,0:18:23.76:0,24,169	0/0:25,0:25:45:0,45,419	0/0:17,0:17:20.56:0,21,172	0/0:25,0:25:49.14:0,49,346	0/0:13,0:13:25.46:0,25,196	0/0:16,0:16:20.76:0,21,149	0/0:28,0:28:35.99:0,36,316	0/1:6,10:16:41:59,0,41	0/1:23,0:23:13.47:13,0,136	0/0:22,0:21:35.84:0,36,287	0/0:19,0:19:53.77:0,54,444	0/0:17,0:17:19.34:0,19,146	0/0:22,0:22:26.92:0,27,214	0/0:16,0:16:5.97:0,6,45	0/0:18,0:18:11.92:0,12,92	0/0:22,0:22:23.85:0,24,177	0/0:32,0:32:30.90:0,31,276	0/0:15,0:15:33.31:0,33,263	0/0:11,0:11:14.92:0,15,113	0/0:17,0:17:38.81:0,39,294
chr10	41807577	.	A	ACATGGACTTTATTTCT	113696.99	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-4.001;DP=689;FS=2.505;HRun=0;HaplotypeScore=265.9636;InbreedingCoeff=0.9899;MQ=74.25;MQ0=1;MQRankSum=-11.846;QD=180.76;ReadPosRankSum=4.799;VQSLOD=4.9810;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:18,9:28:75.26:5256,75,0	0/0:13,0:13:39.12:0,39,1628	0/0:24,0:24:43.92:0,44,2080	0/0:23,0:23:60.20:0,60,2332	1/1:34,9:43:99:6892,114,0	1/1:13,10:23:69.24:5027,69,0	1/1:17,3:21:57.20:3219,57,0	1/1:46,0:46:99:7468,138,0	1/1:17,10:28:75.26:5193,75,0	1/1:18,15:35:96.33:6599,96,0	1/1:13,7:21:54.19:3494,54,0	1/1:13,13:28:78.27:5696,78,0	1/1:12,8:20:60.21:4168,60,0	1/1:13,7:20:60.21:4158,60,0	1/1:16,12:31:84.29:5740,84,0	1/1:10,10:20:57.18:3654,57,0	1/1:10,6:16:39.13:2766,39,0	1/1:4,1:5:15.05:1077,15,0	1/1:10,1:15:45.10:2156,45,0	1/1:18,21:41:99:7739,114,0	1/1:6,2:11:21.07:1201,21,0	1/1:17,14:32:81.28:5544,81,0	1/1:16,14:32:81.15:5667,81,0	1/1:6,6:14:30.10:1873,30,0	1/1:6,13:21:57.20:4440,57,0	1/1:13,13:30:87.28:5560,87,0	1/1:27,13:41:99:7686,111,0	1/1:1,5:6:18.06:1425,18,0
chr10	41807584	.	T	TC	2161.05	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=0.850;DP=568;FS=1.536;HRun=4;HaplotypeScore=256.5896;InbreedingCoeff=0.9890;MQ=83.57;MQ0=0;MQRankSum=-5.743;QD=26.04;ReadPosRankSum=0.138;VQSLOD=1.3432;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,26:27:53.89:630,54,0	0/0:14,0:14:39.10:0,39,434	0/0:23,0:23:69.16:0,69,745	0/0:27,0:27:72.11:0,72,756	1/1:1,25:26:71.62:768,72,0	0/0:20,0:20:56.72:0,57,491	0/0:13,0:13:35.62:0,36,266	0/0:26,0:26:78.20:0,78,860	0/0:20,0:20:53.87:0,54,491	0/0:30,0:30:84.19:0,84,901	0/0:22,0:22:59.55:0,60,517	0/0:21,0:21:53.83:0,54,499	0/0:14,0:14:41.36:0,41,399	0/0:15,0:15:44.74:0,45,376	0/0:26,0:26:68.87:0,69,629	1/1:0,17:17:44.97:543,45,0	1/1:0,13:13:34.13:381,34,0	0/0:6,0:6:14.98:0,15,154	0/0:12,0:12:36.09:0,36,395	0/0:38,0:38:99:0,103,988	0/0:9,0:9:20.87:0,21,173	0/0:27,0:27:71.65:0,72,644	0/0:27,0:27:77.61:0,78,691	0/0:12,0:12:16.81:0,17,162	0/0:19,0:19:48.94:0,49,476	0/0:29,0:29:87.19:0,87,924	0/0:29,0:29:80.77:0,81,738	0/0:6,0:6:18.05:0,18,195
chr10	41808004	.	T	TA	5505.80	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-15.845;DP=554;FS=10.979;HRun=8;HaplotypeScore=67.3753;InbreedingCoeff=0.9962;MQ=78.46;MQ0=0;MQRankSum=-0.970;QD=28.53;ReadPosRankSum=1.435;VQSLOD=4.6970;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,17:19:44.92:497,45,0	0/0:9,0:9:24.01:0,24,219	0/0:17,0:17:32.18:0,32,313	0/0:13,0:13:24.18:0,24,238	1/1:4,26:30:78.12:869,78,0	0/0:1,0:30:55:0,55,162	0/0:0,0:9:16.30:0,16,48	0/0:28,0:28:75:0,75,674	0/0:0,0:18:34.63:0,35,102	1/1:0,21:21:63.19:727,63,0	1/1:2,27:29:78.19:885,78,0	0/0:0,0:17:32.59:0,33,96	0/0:0,0:24:44.82:0,45,132	0/0:1,0:19:30.56:0,31,90	1/1:5,10:15:27.08:312,27,0	1/1:2,10:12:30.09:346,30,0	1/1:0,20:20:54.16:623,54,0	1/1:3,24:27:57.17:658,57,0	0/0:21,0:21:54.03:0,54,494	0/0:29,0:29:69.01:0,69,626	0/0:14,0:14:39.01:0,39,357	0/0:1,0:25:42.77:0,43,126	0/0:4,0:26:36.66:0,37,108	0/0:0,0:12:20.37:0,20,60	1/1:1,19:20:51.15:589,51,0	0/0:17,0:17:48.01:0,48,434	0/0:22,0:22:51.49:0,51,467	0/0:11,0:11:33.02:0,33,301
chr10	41808125	.	A	AAT	9434.42	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-14.149;DP=559;FS=1.126;HRun=0;HaplotypeScore=63.6395;InbreedingCoeff=0.9998;MQ=93.54;MQ0=1;MQRankSum=-4.469;QD=51.84;ReadPosRankSum=1.668;VQSLOD=5.7929;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,21:20:51.18:1036,51,0	0/0:9,0:9:27.09:0,27,436	0/0:30,0:30:85.16:0,85,1348	0/0:25,0:25:63.16:0,63,952	1/1:1,24:26:60.21:1211,60,0	0/0:26,0:26:78.25:0,78,1234	0/0:19,0:19:54.18:0,54,871	0/0:25,0:25:75.23:0,75,1130	0/0:18,0:18:54.18:0,54,881	1/1:2,23:25:72.25:1423,72,0	1/1:3,17:20:48.16:934,48,0	0/0:16,0:16:45.15:0,45,732	0/0:19,0:19:57.19:0,57,928	0/0:17,0:17:51.17:0,51,831	1/1:0,20:20:48.16:976,48,0	1/1:0,16:16:48.16:976,48,0	1/1:1,12:14:39.13:767,39,0	1/1:0,21:21:54.18:1075,54,0	0/0:21,0:21:63.22:0,63,1027	0/0:20,0:20:60.20:0,60,977	0/0:17,0:17:51.15:0,51,775	0/0:20,0:20:57.19:0,57,930	0/0:22,0:22:66.21:0,66,1047	0/0:11,0:11:33.11:0,33,538	1/1:0,19:19:51.18:1037,51,0	0/0:20,0:20:60.19:0,60,952	0/0:30,0:30:90.29:0,90,1440	0/0:12,0:12:36.10:0,36,556
chr10	41810607	.	TTTTTATTTTACA	T	4841.76	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.648;DP=543;FS=3.659;HRun=0;HaplotypeScore=226.8359;InbreedingCoeff=0.9769;MQ=72.02;MQ0=0;MQRankSum=-8.909;QD=86.46;ReadPosRankSum=3.117;VQSLOD=4.8782;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,10:10:24.08:941,24,0	0/0:3,0:3:9.03:0,9,502	0/0:16,0:16:48.11:0,48,2141	0/0:14,0:14:38.94:0,39,1710	1/1:0,27:27:62.89:2150,63,0	0/0:27,0:27:81.27:0,81,4550	0/0:11,0:11:33.11:0,33,1806	0/0:29,0:29:87.29:0,87,5046	0/0:26,0:26:72.23:0,72,3981	0/0:38,0:38:99:0,114,6772	0/0:21,0:21:63.22:0,63,3790	0/0:12,0:12:30.10:0,30,1883	0/0:24,0:24:69.24:0,69,3903	0/0:14,0:14:39.13:0,39,2079	0/0:30,0:30:90.31:0,90,5491	1/1:0,19:19:45.15:1752,45,0	0/0:10,0:10:30.09:0,30,1532	0/0:9,0:9:21.07:0,21,1208	0/0:13,0:13:39.13:0,39,1919	0/0:23,0:23:69.24:0,69,4374	0/0:11,0:11:33.10:0,33,1874	0/0:20,0:20:60.18:0,60,3331	0/0:18,0:18:51.17:0,51,2747	0/0:16,0:16:45.63:0,46,2650	0/0:20,0:20:57.20:0,57,3301	0/0:31,0:31:93.31:0,93,5499	0/0:30,0:30:90.31:0,90,5117	0/0:21,0:21:63.22:0,63,3363
chr10	41810642	.	T	TTTTTCCTATTTAAGGGATG	64977.05	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=0.168;DP=622;FS=0.375;HRun=0;HaplotypeScore=344.6113;InbreedingCoeff=0.9849;MQ=70.52;MQ0=0;MQRankSum=-15.970;QD=149.72;ReadPosRankSum=-0.177;VQSLOD=4.0011;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:16,2:18:45.15:3215,45,0	0/0:5,0:5:15.05:0,15,767	0/0:24,0:24:9.53:0,10,434	0/0:12,0:12:24.08:0,24,765	1/1:27,5:32:60.16:3381,60,0	1/1:27,5:34:75.26:5237,75,0	1/1:21,0:21:54.18:3087,54,0	0/0:35,0:35:72.24:0,72,2706	1/1:20,10:34:72.25:5619,72,0	1/1:36,7:43:99:6617,99,0	1/1:22,5:29:57.19:3419,57,0	1/1:11,5:16:27.09:1916,27,0	1/1:19,6:25:60.20:4086,60,0	1/1:13,11:25:60.20:4021,60,0	1/1:23,4:28:69.24:5002,69,0	1/1:21,5:26:57.19:3431,57,0	1/1:14,0:14:16.41:1690,16,0	1/1:10,0:10:18.06:1367,18,0	0/0:11,0:11:24.08:0,24,910	0/0:30,0:30:78.27:0,78,3700	0/0:11,0:11:24.08:0,24,1129	1/1:12,7:20:51.18:4049,51,0	1/1:15,8:25:63.22:4369,63,0	1/1:13,0:13:21.07:987,21,0	1/1:13,7:20:51.18:3483,51,0	0/0:25,0:25:57.19:0,57,2725	0/0:23,0:23:48.13:0,48,2173	0/0:12,0:12:24.08:0,24,1238
chr10	41811091	.	CTT	C	1080.07	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.019;DP=777;FS=3.488;HRun=5;HaplotypeScore=148.1896;InbreedingCoeff=0.9451;MQ=88.89;MQ0=0;MQRankSum=-0.617;QD=36.00;ReadPosRankSum=0.550;VQSLOD=2.0976;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,135,2397	0/0:12,0:12:36.11:0,36,624	0/0:33,0:33:76.86:0,77,1324	0/0:27,0:27:78.13:0,78,1229	0/0:36,0:36:74.93:0,75,1345	0/0:29,0:29:84.26:0,84,1470	0/0:18,0:18:54.19:0,54,989	0/0:25,0:25:66.19:0,66,1068	0/0:28,0:28:81.27:0,81,1451	0/0:39,0:39:99:0,105,1786	0/0:30,0:30:87.30:0,87,1541	0/0:23,0:23:69.24:0,69,1260	0/0:28,0:28:75.21:0,75,1307	0/0:33,0:33:99:0,99,1726	0/0:30,0:30:90.30:0,90,1618	0/0:31,0:31:87.30:0,87,1595	1/1:0,30:30:84.28:1175,84,0	0/0:18,0:18:51.17:0,51,934	0/0:32,0:32:87.29:0,87,1566	0/0:36,0:36:99:0,99,1746	0/0:29,0:29:78.26:0,78,1388	0/0:27,0:27:81.26:0,81,1421	0/0:28,0:28:81.27:0,81,1421	0/0:18,0:18:42.14:0,42,763	0/0:16,0:16:42.14:0,42,769	0/0:41,0:41:99:0,117,2118	0/0:30,0:30:78.26:0,78,1401	0/0:3,0:3:9.03:0,9,165
chr10	41811352	.	CGTGAGGCAATTGGCCACATCCCAAACACA	C	36145.68	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=16.941;DP=567;FS=1.646;HRun=0;HaplotypeScore=432.4371;InbreedingCoeff=0.9515;MQ=88.16;MQ0=0;MQRankSum=-15.900;QD=113.67;ReadPosRankSum=9.427;VQSLOD=3.2820;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,14:23:36.12:2675,36,0	0/0:14,0:14:42.14:0,42,5089	0/0:25,0:25:69.18:0,69,4047	0/0:33,0:33:87.24:0,87,5414	1/1:3,15:18:35.70:2180,36,0	1/1:3,10:13:27.09:2094,27,0	1/1:6,11:17:24.08:1784,24,0	0/0:22,0:22:60.20:0,60,5044	1/1:4,17:21:42.14:3217,42,0	1/1:8,9:17:24.08:1420,24,0	1/1:5,6:11:3.01:202,3,0	1/1:6,16:22:36.12:2791,36,0	1/1:9,15:24:38.80:3007,39,0	1/1:9,11:20:27.09:2023,27,0	1/1:7,23:30:57.20:4421,57,0	1/1:7,11:18:24.08:1642,24,0	1/1:5,10:15:27.09:1699,27,0	1/1:5,4:9:5.75:465,6,0	0/0:22,0:22:63.15:0,63,5232	0/0:20,0:20:57.20:0,57,6253	0/0:36,0:36:99:0,108,11670	1/1:3,13:16:30.10:2136,30,0	1/1:4,12:16:30.10:2155,30,0	1/1:4,13:17:16.59:1144,17,0	1/1:5,6:11:15.05:1088,15,0	0/0:32,0:32:87.30:0,87,10400	0/0:39,0:38:99:0,108,12343	0/0:6,0:6:18.06:0,18,2293
chr10	41811851	.	C	CT	17990.06	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=4.384;DP=516;FS=10.924;HRun=1;HaplotypeScore=84.9106;InbreedingCoeff=0.9948;MQ=93.98;MQ0=0;MQRankSum=-10.378;QD=39.37;ReadPosRankSum=4.141;VQSLOD=4.7552;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,26:26:66.22:979,66,0	0/0:10,0:10:30.10:0,30,389	0/0:21,0:21:57.16:0,57,711	0/0:28,0:28:84.23:0,84,1056	1/1:0,33:34:90.26:1316,90,0	1/1:1,18:19:45.15:673,45,0	1/1:0,10:10:30.10:449,30,0	1/1:3,28:31:87.27:1254,87,0	1/1:0,12:12:36.12:539,36,0	1/1:4,23:27:78.18:1112,78,0	1/1:0,13:13:39:509,39,0	1/1:0,10:10:24.08:360,24,0	1/1:1,17:18:45.15:674,45,0	1/1:0,21:21:57.19:854,57,0	1/1:0,19:19:48.16:719,48,0	1/1:1,11:12:30.10:449,30,0	1/1:0,11:11:33.11:494,33,0	1/1:1,8:9:21.07:314,21,0	1/1:2,14:16:45.15:674,45,0	1/1:0,25:25:69.23:1017,69,0	1/1:0,14:14:42.14:629,42,0	1/1:1,9:10:24.08:360,24,0	1/1:2,13:15:36.12:528,36,0	1/1:0,19:19:57.19:854,57,0	1/1:1,14:15:36.12:539,36,0	1/1:0,29:29:84.25:1214,84,0	1/1:1,28:30:78.26:1163,78,0	1/1:2,10:12:21.07:314,21,0
chr10	41812057	.	ATTTTTT	A	4601.50	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=8.125;DP=264;FS=30.349;HRun=8;HaplotypeScore=116.0788;InbreedingCoeff=0.1962;MQ=68.10;MQ0=4;MQRankSum=-6.958;QD=27.39;ReadPosRankSum=5.755;VQSLOD=0.7025;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:2.47:0,2,135	0/0:2,0:2:6.02:0,6,215	0/0:20,0:13:29.99:0,30,372	0/0:26,0:8:9.05:0,9,175	0/0:16,0:16:1.07:0,1,252	1/1:7,0:8:3.87:215,4,0	0/1:2,0:4:0.19:0,0,30	1/1:3,7:10:24.04:337,24,0	0/1:8,0:10:12.54:223,0,13	0/1:8,0:15:64.49:106,0,64	0/1:8,0:11:39.97:111,0,40	1/1:4,0:4:0.32:100,0,0	0/1:7,0:9:50.48:110,0,50	0/1:2,0:4:0.35:41,0,0	0/1:6,0:7:19.16:142,0,19	0/0:5,0:5:4.63:0,5,90	0/0:2,0:2:4.23:0,4,16	0/0:3,0:9:10.64:0,11,131	1/1:1,7:8:21.06:326,21,0	1/1:2,12:14:33.04:550,33,0	1/1:2,0:2:3:25,3,0	0/1:3,0:3:27.88:28,0,32	0/1:4,0:6:4.71:118,0,5	0/0:0,0:1:2.68:0,3,11	1/1:6,0:10:3.44:158,3,0	1/1:0,17:17:51.13:852,51,0	1/1:4,12:16:39.13:712,39,0	1/1:3,7:9:27.07:447,27,0
chr10	41812058	.	TTTTTTTTA	T	6410.41	PASS	AB=1.000;AC=46;AF=0.821;AN=56;BaseQRankSum=3.585;DP=260;FS=35.781;HRun=0;HaplotypeScore=119.3543;InbreedingCoeff=0.4115;MQ=68.22;MQ0=4;MQRankSum=-4.598;QD=30.53;ReadPosRankSum=2.950;VQSLOD=2.8993;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:13,0:13:23.81:117,0,24	0/0:2,0:2:6.02:0,6,222	0/0:20,0:13:5.45:0,5,240	0/0:28,0:8:11.31:0,11,133	0/1:16,0:16:64.83:176,0,65	1/1:2,6:8:21.07:490,21,0	1/1:4,0:4:9.03:126,9,0	1/1:9,0:9:14.35:75,14,0	1/1:4,6:10:27.09:569,27,0	1/1:11,4:15:39.12:667,39,0	1/1:6,5:11:30.10:548,30,0	1/1:1,3:4:12.04:261,12,0	1/1:6,3:9:21.07:367,21,0	1/1:2,1:3:9.03:150,9,0	1/1:2,5:7:18.06:423,18,0	0/1:5,0:5:16.46:44,0,16	1/1:2,0:2:5.99:56,6,0	1/1:9,0:9:20.48:235,20,0	1/1:8,0:8:5.53:58,6,0	1/1:13,0:13:26.84:195,27,0	0/1:2,0:2:0:0,0,0	1/1:1,2:3:6.02:107,6,0	1/1:3,3:6:18.06:335,18,0	1/1:1,0:1:3.01:35,3,0	1/1:5,5:10:30.10:614,30,0	1/1:17,0:17:36.13:288,36,0	1/1:15,0:15:36.32:326,36,0	1/1:10,0:9:21.05:149,21,0
chr10	41812068	.	TTTTTTTA	T	4383.88	PASS	AB=1.000;AC=41;AF=0.759;AN=54;BaseQRankSum=3.401;DP=266;FS=61.117;HRun=0;HaplotypeScore=119.5572;InbreedingCoeff=0.5424;MQ=60.76;MQ0=15;MQRankSum=-2.068;QD=22.71;ReadPosRankSum=5.311;VQSLOD=1.8512;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,6:12:29.98:531,30,0	0/0:3,0:2:6.02:0,6,174	0/0:21,0:10:8.17:0,8,122	0/0:36,0:8:12.17:0,12,83	1/1:4,8:12:33.04:644,33,0	1/1:7,0:7:21.07:397,21,0	1/1:2,0:2:4.23:25,4,0	1/1:9,0:8:4.77:42,5,0	1/1:10,0:10:25.27:427,25,0	0/1:12,0:12:55.49:55,0,62	0/1:11,0:11:0.54:81,0,1	1/1:5,0:5:9.03:179,9,0	1/1:7,0:7:15.05:250,15,0	1/1:3,0:3:9.02:121,9,0	1/1:6,0:6:14.95:116,15,0	1/1:2,2:4:12.04:244,12,0	./.	0/0:9,0:7:8.32:0,8,48	1/1:10,0:9:1.82:46,2,0	1/1:13,0:14:18.19:159,18,0	0/0:2,0:1:2.22:0,2,7	1/1:3,0:2:3.01:59,3,0	1/1:7,0:7:15.10:226,15,0	0/1:1,0:1:0:0,0,0	1/1:13,0:12:5.81:100,6,0	1/1:19,0:18:33.02:252,33,0	1/1:13,0:16:30.82:294,31,0	1/1:9,0:8:20.37:135,20,0
chr10	41812074	.	T	TG	1819.33	PASS	AB=0.802;AC=24;AF=0.462;AN=52;BaseQRankSum=-2.189;DP=250;FS=0.000;HRun=0;HaplotypeScore=101.9283;InbreedingCoeff=0.1415;MQ=50.32;MQ0=21;MQRankSum=-1.673;QD=10.16;ReadPosRankSum=-2.561;VQSLOD=3.1974;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:8,0:11:22.68:23,0,43	0/0:3,0:2:6.02:0,6,78	0/0:24,0:6:5.01:0,5,100	0/1:39,0:8:15.52:16,0,65	0/0:10,0:11:6.06:0,6,83	0/0:6,0:7:9.85:0,10,62	0/0:2,0:2:2.92:0,3,17	1/1:3,4:4:12.02:121,12,0	0/0:8,0:9:1.64:0,2,67	0/1:6,6:12:20.23:218,0,20	0/1:6,2:8:32.18:57,0,32	0/0:5,0:5:11.07:0,11,50	0/1:4,0:6:8.41:8,0,23	0/1:2,0:3:0.85:1,0,21	0/0:5,0:5:13.15:0,13,51	0/1:2,0:4:2.07:32,0,2	./.	0/1:7,1:5:19.39:62,0,19	1/1:4,4:6:14.96:136,15,0	1/1:1,10:10:29.93:255,30,0	1/1:1,1:1:3.01:34,3,0	0/0:3,0:2:2.80:0,3,13	0/1:5,0:6:6.43:6,0,43	./.	0/1:11,3:12:29.87:100,0,30	1/1:5,11:15:41.06:379,41,0	1/1:0,13:13:38.72:352,39,0	1/1:3,7:8:20.82:184,21,0
chr10	41817197	.	GT	G	334.94	PASS	AC=6;AF=0.429;AN=14;BaseQRankSum=2.023;DP=567;FS=0.000;HRun=2;HaplotypeScore=21.8381;MQ=5.88;MQ0=533;MQRankSum=1.115;QD=4.72;ReadPosRankSum=-1.032;VQSLOD=0.0580;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	0/0:11,0:1:3.01:0,3,45	./.	./.	0/0:28,0:3:6.02:0,6,89	./.	./.	./.	./.	1/1:33,1:1:3.01:39,3,0	1/1:21,7:8:18.06:232,18,0	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	0/0:28,0:2:6.02:0,6,90	0/0:17,0:4:9.03:0,9,134	./.	1/1:5,4:4:12.04:155,12,0	./.	./.	./.
chr10	41817569	.	CT	C	45.18	PASS	AC=4;AF=0.087;AN=46;BaseQRankSum=-0.705;DP=169;FS=2.787;HRun=8;HaplotypeScore=47.3636;InbreedingCoeff=0.4892;MQ=75.53;MQ0=6;MQRankSum=0.184;QD=6.45;ReadPosRankSum=-1.309;VQSLOD=-0.1237;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:15.05:0,15,181	0/0:6,0:6:3.01:0,3,36	0/0:11,0:8:4.20:0,4,95	0/0:8,0:6:4.58:0,5,51	0/0:10,0:10:27.08:0,27,321	0/0:4,0:4:8.68:0,9,60	0/0:1,0:1:3:0,3,26	1/1:2,4:5:12.01:116,12,0	0/0:7,0:6:14.29:0,14,102	0/0:11,0:11:21.06:0,21,247	0/0:9,0:9:12.04:0,12,140	0/0:5,0:4:5.81:0,6,44	0/0:5,0:5:11.44:0,11,90	0/0:6,0:5:8.01:0,8,57	0/0:12,0:11:27.08:0,27,320	0/0:10,0:10:21.06:0,21,246	0/0:9,0:9:21.05:0,21,233	0/0:10,0:9:24.04:0,24,263	./.	./.	./.	0/0:3,0:3:6.02:0,6,65	0/0:6,0:6:14.15:0,14,84	0/0:4,0:4:11.40:0,11,79	0/0:10,0:10:21.06:0,21,249	./.	1/1:0,1:1:3:28,3,0	./.
chr10	41817578	.	CT	C	306.41	PASS	AB=1.000;AC=19;AF=0.432;AN=44;BaseQRankSum=-5.168;DP=146;FS=0.000;HRun=12;HaplotypeScore=36.6937;InbreedingCoeff=0.6651;MQ=71.13;MQ0=8;MQRankSum=-1.086;QD=7.66;ReadPosRankSum=1.333;VQSLOD=1.1361;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:5:13.98:0,14,80	0/0:6,0:6:3.01:0,3,30	0/0:11,0:8:2.92:0,3,18	0/0:5,0:3:1.25:0,1,3	0/0:10,0:10:24.70:0,25,109	1/1:1,2:3:5.98:46,6,0	1/1:0,1:1:2.99:23,3,0	1/1:7,0:4:2.96:20,3,0	1/1:2,4:5:8.96:70,9,0	0/0:7,0:7:14.86:0,15,101	0/0:7,0:7:8.95:0,9,68	1/1:2,2:3:2.98:23,3,0	1/1:2,2:4:5.98:46,6,0	1/1:2,3:4:8.96:70,9,0	0/0:12,0:11:20.80:0,21,150	0/0:8,0:7:13.72:0,14,61	0/0:8,0:8:6.01:0,6,61	0/0:8,0:7:14.48:0,14,79	./.	./.	0/1:1,0:1:0:0,0,0	./.	1/1:1,4:5:11.94:93,12,0	1/1:1,3:4:8.96:70,9,0	0/0:7,0:7:17.90:0,18,134	./.	./.	./.
chr10	41817585	.	T	TTC	776.86	PASS	AB=0.773;AC=6;AF=0.136;AN=44;BaseQRankSum=-4.022;DP=127;FS=0.000;HRun=0;HaplotypeScore=31.6747;InbreedingCoeff=0.3771;MQ=56.13;MQ0=12;MQRankSum=-3.553;QD=25.06;ReadPosRankSum=1.196;VQSLOD=3.6891;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:1,5:6:28.38:183,0,28	0/0:6,0:6:3.48:0,3,44	0/1:8,0:5:1.01:1,0,8	0/0:2,0:1:2.90:0,3,16	1/1:0,9:9:27.09:446,27,0	0/0:2,0:2:5.99:0,6,49	0/0:1,0:1:3:0,3,25	0/0:7,0:2:2.04:0,2,6	0/0:5,0:4:8.99:0,9,74	0/0:7,0:6:14.48:0,14,81	0/0:6,0:6:8.88:0,9,57	0/0:4,0:3:5.97:0,6,46	0/0:2,0:2:5.99:0,6,49	0/0:5,0:4:11.97:0,12,95	0/0:12,0:11:23.37:0,23,139	1/1:2,6:7:17.98:265,18,0	0/0:6,0:6:9:0,9,107	0/0:7,0:6:13.65:0,14,58	./.	./.	0/0:1,0:1:2.90:0,3,16	./.	0/0:5,0:5:14.96:0,15,119	0/0:4,0:4:8.99:0,9,74	0/0:6,0:6:17.74:0,18,111	./.	./.	./.
chr10	41818718	.	TC	T	8651.40	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=5.011;DP=589;FS=13.747;HRun=1;HaplotypeScore=96.3426;InbreedingCoeff=0.9969;MQ=48.78;MQ0=33;MQRankSum=-1.240;QD=36.97;ReadPosRankSum=1.015;VQSLOD=3.6832;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,27:28:81.23:1108,81,0	0/0:6,0:6:15.05:0,15,239	0/0:44,0:16:44.79:0,45,556	0/0:42,0:18:48.44:0,48,704	1/1:2,28:27:78.22:1065,78,0	1/1:1,17:17:51.17:711,51,0	1/1:1,8:8:24.08:335,24,0	0/0:23,0:20:60.20:0,60,959	1/1:0,10:9:27.05:354,27,0	0/0:25,0:23:66.22:0,66,1053	0/0:26,0:25:69.23:0,69,1075	1/1:0,9:9:27.09:376,27,0	1/1:0,16:16:45.15:627,45,0	1/1:0,19:18:51.13:687,51,0	0/0:24,0:23:69.17:0,69,1064	1/1:3,24:24:66.22:920,66,0	1/1:5,12:13:36.12:502,36,0	0/0:9,0:9:27.09:0,27,424	0/0:24,0:18:51.17:0,51,815	0/0:33,0:31:90.31:0,90,1432	0/0:20,0:19:54.18:0,54,847	1/1:0,18:18:51.17:711,51,0	1/1:1,20:19:54.18:752,54,0	1/1:0,12:12:36.12:502,36,0	0/0:10,0:9:27.09:0,27,429	0/0:23,0:23:69.24:0,69,1102	0/0:26,0:23:66.23:0,66,1049	0/0:19,0:19:57.19:0,57,884
chr10	41820532	.	TTGTGTGTG	T	1356.26	PASS	AB=0.750;AC=13;AF=0.250;AN=52;BaseQRankSum=3.700;DP=542;FS=12.789;HRun=0;HaplotypeScore=137.4736;InbreedingCoeff=0.7483;MQ=59.68;MQ0=10;MQRankSum=-5.690;QD=10.20;ReadPosRankSum=-0.760;VQSLOD=1.8307;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:34:20.23:0,20,370	0/0:6,0:6:3.01:0,3,91	./.	./.	0/0:14,0:16:18.02:0,18,284	0/0:21,0:27:21.07:0,21,652	0/0:17,0:17:21.07:0,21,721	0/0:22,0:22:2.98:0,3,22	0/0:10,0:10:9.03:0,9,245	0/0:20,0:20:42.10:0,42,1099	0/0:20,0:21:21.07:0,21,639	0/0:9,0:9:15.05:0,15,422	0/0:13,0:19:36.12:0,36,1212	0/0:12,0:14:18.06:0,18,543	0/0:18,0:18:17.93:0,18,613	0/0:15,0:19:27.05:0,27,491	1/1:20,2:21:9.03:183,9,0	0/0:11,0:10:12.04:0,12,290	1/1:12,5:17:12.41:318,12,0	1/1:22,3:25:18.05:290,18,0	1/1:14,3:18:2.72:20,3,0	0/0:21,0:25:27.09:0,27,752	0/0:22,0:27:36.12:0,36,1221	0/0:9,0:12:20.93:0,21,673	0/0:19,0:18:27.09:0,27,905	1/1:15,7:21:11.84:246,12,0	0/1:14,6:20:4.91:315,0,5	1/1:5,2:6:6.02:148,6,0
chr10	41820605	.	TGTAAG	T	607.69	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.785;DP=432;FS=6.389;HRun=0;HaplotypeScore=85.4325;InbreedingCoeff=0.9475;MQ=87.93;MQ0=0;MQRankSum=-4.401;QD=40.51;ReadPosRankSum=1.125;VQSLOD=3.3188;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:78.22:0,78,2311	0/0:8,0:8:21.07:0,21,657	0/0:22,0:21:58.62:0,59,1616	0/0:25,0:25:48.09:0,48,1379	0/0:13,0:13:39.13:0,39,1219	0/0:23,0:22:66.23:0,66,2051	0/0:20,0:20:54.19:0,54,1691	0/0:33,0:33:96.33:0,96,3002	0/0:12,0:12:36.12:0,36,1127	0/0:23,0:23:68.90:0,69,2060	0/0:22,0:22:57.20:0,57,1781	0/0:13,0:13:39.13:0,39,1221	0/0:7,0:7:21.07:0,21,657	0/0:10,0:10:27.09:0,27,846	0/0:6,0:6:18.06:0,18,564	0/0:11,0:11:33.11:0,33,1033	1/1:3,12:15:33.11:702,33,0	0/0:5,0:5:12.04:0,12,376	0/0:9,0:9:21.06:0,21,551	0/0:17,0:17:45.14:0,45,1339	0/0:18,0:18:48.16:0,48,1489	0/0:10,0:10:30.10:0,30,939	0/0:16,0:16:45.15:0,45,1398	0/0:9,0:9:27.09:0,27,845	0/0:9,0:9:27.09:0,27,836	0/0:17,0:17:48.16:0,48,1504	0/0:18,0:17:51.18:0,51,1561	0/0:12,0:12:33.11:0,33,1021
chr10	41821072	.	CGA	C	6836.05	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=15.351;DP=433;FS=0.000;HRun=0;HaplotypeScore=69.3520;InbreedingCoeff=0.9657;MQ=91.45;MQ0=0;MQRankSum=-5.205;QD=37.15;ReadPosRankSum=5.044;VQSLOD=7.0717;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,27:28:69.19:1030,69,0	0/0:8,0:8:24.08:0,24,488	0/0:17,0:17:45.63:0,46,882	0/0:19,0:19:50.89:0,51,840	1/1:0,10:10:21.07:321,21,0	1/1:0,15:15:42.14:643,42,0	1/1:0,15:15:39.13:597,39,0	0/0:34,0:34:99:0,99,1849	1/1:0,16:16:45.15:689,45,0	0/0:14,0:14:42.14:0,42,841	0/0:11,0:11:33.11:0,33,655	1/1:0,17:17:45.15:689,45,0	1/1:1,13:14:30.10:459,30,0	1/1:0,16:16:39.13:597,39,0	0/0:21,0:21:63.18:0,63,1239	1/1:0,7:7:21.07:321,21,0	1/1:0,19:19:39.13:597,39,0	0/0:1,0:1:3.01:0,3,61	0/0:17,0:17:51.18:0,51,1036	0/0:16,0:16:48.16:0,48,951	0/0:25,0:25:75.24:0,75,1473	1/1:0,4:4:9.03:138,9,0	1/1:0,8:8:21.07:321,21,0	1/1:0,15:15:30.06:433,30,0	0/0:8,0:8:24.08:0,24,488	0/0:23,0:23:69.24:0,69,1379	0/0:23,0:23:66.23:0,66,1315	0/0:12,0:12:36.09:0,36,658
chr10	41821250	.	GTTGTTGTTA	G	1644.30	PASS	AB=1.000;AC=17;AF=0.315;AN=54;BaseQRankSum=3.614;DP=282;FS=13.521;HRun=0;HaplotypeScore=115.8915;InbreedingCoeff=0.6152;MQ=74.72;MQ0=1;MQRankSum=-3.672;QD=20.30;ReadPosRankSum=1.668;VQSLOD=2.1579;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,9:11:24.08:516,24,0	0/0:4,0:4:6.02:0,6,144	0/0:15,0:13:24.06:0,24,757	0/0:11,0:10:24.08:0,24,665	1/1:5,14:19:36.03:642,36,0	1/1:10,0:10:11.93:136,12,0	0/0:8,0:8:2.86:0,3,19	0/0:26,0:26:69.21:0,69,1855	1/1:5,0:5:2.74:12,3,0	0/0:18,0:18:14.46:0,14,148	0/0:13,0:13:1.79:0,2,5	0/0:6,0:6:3.93:0,4,27	1/1:7,0:7:3.01:38,3,0	0/0:7,0:7:11.40:0,11,138	1/1:7,0:7:0.94:2,1,0	1/1:1,9:10:18.06:426,18,0	1/1:5,0:5:1.41:3,1,0	0/1:7,0:7:19.61:34,0,20	0/0:14,0:14:35.14:0,35,945	0/0:9,0:9:21.07:0,21,568	0/0:5,0:5:12.04:0,12,322	0/0:6,0:6:7.91:0,8,73	0/0:7,0:7:5.67:0,6,74	./.	0/0:9,0:9:1.88:0,2,21	0/0:12,0:12:28.32:0,28,691	0/0:17,0:17:37.13:0,37,1125	0/0:10,0:10:24.24:0,24,739
chr10	41821259	.	ATTGTTG	A	3597.31	PASS	AB=1.000;AC=35;AF=0.625;AN=56;BaseQRankSum=1.545;DP=251;FS=0.000;HRun=0;HaplotypeScore=87.3093;InbreedingCoeff=0.8326;MQ=65.74;MQ0=2;MQRankSum=0.147;QD=25.88;ReadPosRankSum=3.239;VQSLOD=3.2714;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,0:10:21.47:227,21,0	0/0:3,0:3:6.02:0,6,98	0/0:10,0:8:18.06:0,18,357	0/0:10,0:9:17.93:0,18,279	1/1:15,0:15:27.30:257,27,0	1/1:10,0:10:12.02:165,12,0	1/1:7,0:7:15.05:248,15,0	0/0:28,0:27:71.62:0,72,985	1/1:4,0:4:2.89:19,3,0	1/1:19,0:19:45.11:648,45,0	1/1:0,11:11:33.09:369,33,0	1/1:4,0:4:12.04:165,12,0	1/1:6,0:6:3.01:44,3,0	1/1:5,0:5:5.95:68,6,0	1/1:5,0:5:15.05:232,15,0	1/1:9,0:9:18.06:214,18,0	1/1:5,0:5:15.05:231,15,0	1/1:7,0:7:18.06:241,18,0	0/0:13,0:13:35.61:0,36,501	0/0:8,0:8:21.05:0,21,269	0/0:5,0:5:11.96:0,12,141	1/1:6,0:6:9.03:149,9,0	0/1:6,0:6:0.17:0,0,0	1/1:4,0:4:3.01:34,3,0	1/1:6,0:6:18.06:285,18,0	0/0:9,0:9:19.61:0,20,317	0/0:16,0:16:28.77:0,29,533	0/0:10,0:10:21.92:0,22,362
chr10	41821262	.	GTTGTTGTTATTATTATTATTA	G	4348.06	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-0.015;DP=237;FS=0.000;HRun=0;HaplotypeScore=145.2229;InbreedingCoeff=0.8352;MQ=61.34;MQ0=2;MQRankSum=0.227;QD=35.35;ReadPosRankSum=2.951;VQSLOD=3.8601;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:9,0:9:21:226,21,0	0/0:2,0:2:6.02:0,6,230	0/0:8,0:6:18.06:0,18,357	0/0:9,0:8:17.93:0,18,279	1/1:14,0:15:27.30:257,27,0	1/1:0,9:10:12.04:639,12,0	1/1:5,0:5:15.05:248,15,0	0/0:28,0:27:68.83:0,69,979	1/1:0,0:4:2.94:124,3,0	1/1:0,0:17:45.11:648,45,0	1/1:11,0:11:33.09:369,33,0	1/1:4,0:4:12.04:206,12,0	1/1:0,0:6:3.01:148,3,0	1/1:3,0:3:5.95:68,6,0	1/1:5,0:5:15.05:233,15,0	1/1:9,0:9:18.06:214,18,0	1/1:5,0:5:15.05:238,15,0	1/1:7,0:7:20.28:249,20,0	0/0:13,0:13:39.05:0,39,586	0/0:8,0:8:21.05:0,21,269	0/0:5,0:5:11.96:0,12,245	1/1:3,0:3:9.03:149,9,0	0/0:1,5:6:0.14:0,0,0	1/1:0,4:4:3.01:34,3,0	1/1:6,0:6:18.06:298,18,0	0/0:8,0:8:24.02:0,24,383	0/0:17,0:17:45.06:0,45,722	0/0:10,0:10:30.07:0,30,428
chr10	41821268	.	GTTATTATTATTA	G	957.78	PASS	AB=1.000;AC=21;AF=0.750;AN=28;BaseQRankSum=1.519;DP=223;FS=0.000;HRun=0;HaplotypeScore=113.1148;InbreedingCoeff=0.2971;MQ=54.34;MQ0=2;MQRankSum=-1.735;QD=9.39;ReadPosRankSum=1.085;VQSLOD=1.7894;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:2,0:2:3.01:0,3,97	./.	./.	./.	1/1:10,0:10:12.04:288,12,0	./.	./.	1/1:4,0:4:2.94:55,3,0	1/1:17,0:17:2.84:14,3,0	./.	0/1:4,0:4:0:0,0,0	1/1:6,0:6:3.01:75,3,0	1/1:2,0:2:2.94:18,3,0	./.	./.	0/1:5,0:5:0:0,0,0	./.	1/1:9,3:12:8.99:182,9,0	./.	./.	./.	0/0:5,0:5:0:0,0,0	./.	0/1:6,0:6:0:0,0,0	1/1:7,1:8:3.01:102,3,0	1/1:13,4:17:6.02:204,6,0	1/1:9,2:11:3.01:102,3,0
chr10	41822312	.	A	AC	14940.92	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=4.723;DP=522;FS=4.760;HRun=5;HaplotypeScore=105.9440;InbreedingCoeff=0.9623;MQ=84.23;MQ0=0;MQRankSum=-7.265;QD=31.86;ReadPosRankSum=4.018;VQSLOD=4.6537;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:9,26:35:75.24:980,75,0	0/0:13,0:13:39.10:0,39,418	0/0:22,0:22:39.13:0,39,498	0/0:18,0:18:42.07:0,42,429	1/1:2,24:26:60.20:789,60,0	1/1:5,21:26:57.18:739,57,0	1/1:3,23:26:69.22:908,69,0	1/1:2,16:18:36.08:426,36,0	1/1:1,13:14:42.14:552,42,0	1/1:2,15:17:48.16:629,48,0	1/1:2,13:14:39.13:512,39,0	1/1:1,13:14:39.08:484,39,0	1/1:5,15:20:51.17:671,51,0	1/1:2,13:14:39.13:509,39,0	1/1:2,7:9:24.04:296,24,0	1/1:1,15:15:45.14:581,45,0	1/1:3,23:26:69.22:907,69,0	1/1:1,21:22:48.16:632,48,0	1/1:1,14:15:42.58:533,43,0	1/1:4,15:19:51.17:670,51,0	1/1:5,19:24:48.16:632,48,0	1/1:2,23:25:63.20:822,63,0	1/1:1,12:13:30.10:394,30,0	1/1:0,11:11:27.09:355,27,0	1/1:1,12:13:36.12:470,36,0	1/1:3,19:22:57.18:746,57,0	1/1:1,24:25:48.15:626,48,0	1/1:0,3:3:6.02:79,6,0
chr10	41822378	.	TTTCTGTCA	T	19273.23	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=12.873;DP=520;FS=9.349;HRun=0;HaplotypeScore=171.4460;InbreedingCoeff=0.9868;MQ=73.53;MQ0=0;MQRankSum=-15.912;QD=62.58;ReadPosRankSum=5.037;VQSLOD=4.0185;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,15:18:39.13:1091,39,0	0/0:10,0:10:27.05:0,27,950	0/0:18,0:18:47.65:0,48,1871	0/0:12,0:12:30.10:0,30,1074	1/1:2,9:9:20.98:401,21,0	1/1:3,22:25:60.16:1582,60,0	1/1:4,12:16:36.04:879,36,0	0/0:27,0:27:75.24:0,75,2770	1/1:2,14:16:42.07:1047,42,0	1/1:6,13:19:45.14:1196,45,0	1/1:1,9:9:18.06:503,18,0	1/1:3,22:25:66.23:1845,66,0	1/1:3,24:27:69.17:1751,69,0	1/1:2,21:22:54.19:1510,54,0	1/1:3,19:22:60.20:1621,60,0	1/1:3,17:19:48.12:1236,48,0	1/1:4,12:16:39.09:1027,39,0	1/1:2,7:7:15.03:360,15,0	0/0:20,0:20:51.17:0,51,2034	0/0:27,0:26:66.23:0,66,2812	0/0:21,0:21:48.15:0,48,1916	1/1:2,15:17:45.11:1195,45,0	1/1:4,12:16:39.08:938,39,0	1/1:1,5:6:9.03:252,9,0	1/1:0,12:12:30.10:839,30,0	0/0:31,0:31:84.29:0,84,3646	0/0:33,0:33:72.25:0,72,3165	0/0:13,0:13:33.11:0,33,1451
chr10	41822443	.	A	AT	4739.03	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-11.721;DP=562;FS=0.000;HRun=7;HaplotypeScore=105.0855;InbreedingCoeff=0.9987;MQ=72.55;MQ0=0;MQRankSum=1.578;QD=28.21;ReadPosRankSum=0.149;VQSLOD=4.2856;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:69.10:0,69,666	0/0:9,0:9:27.04:0,27,261	0/0:18,0:18:37.85:0,38,348	0/0:18,0:18:25.93:0,26,256	0/0:21,0:20:54.09:0,54,521	0/0:28,0:28:66.10:0,66,636	0/0:19,0:19:51.06:0,51,486	1/1:7,21:28:57.17:679,57,0	0/0:15,0:15:42.06:0,42,404	0/0:23,0:23:60.03:0,60,563	0/0:8,0:8:24.04:0,24,232	0/0:23,0:23:48.06:0,48,458	0/0:21,0:21:45.07:0,45,434	0/0:20,0:19:42.06:0,42,404	0/0:24,0:24:60.08:0,60,574	0/0:17,0:17:39.06:0,39,376	0/0:17,0:17:51.03:0,51,483	0/0:18,0:18:48.08:0,48,463	1/1:3,19:22:57.16:676,57,0	1/1:2,26:28:75.15:873,75,0	1/1:1,20:21:48.15:580,48,0	0/0:19,0:19:51.08:0,51,492	0/0:16,0:16:36.05:0,36,346	0/0:11,0:11:24.04:0,24,232	0/0:22,0:22:39.06:0,39,376	1/1:6,25:31:52.23:897,52,0	1/1:4,18:22:48.11:563,48,0	1/1:1,15:16:39.12:471,39,0
chr10	41822775	.	A	ATAAT	2203.79	PASS	AB=1.000;AC=36;AF=0.667;AN=54;BaseQRankSum=-3.131;DP=271;FS=13.965;HRun=0;HaplotypeScore=47.9461;InbreedingCoeff=0.3052;MQ=40.76;MQ0=16;MQRankSum=-7.397;QD=11.30;ReadPosRankSum=-4.591;VQSLOD=-0.2956;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:15:11.91:0,12,88	0/0:7,0:8:15.23:0,15,241	./.	0/0:5,0:1:2.97:0,3,20	0/1:11,0:8:9.04:9,0,55	1/1:4,0:5:3.01:78,3,0	1/1:4,0:3:2.94:18,3,0	1/1:25,0:18:50.46:376,50,0	1/1:8,0:7:8.92:93,9,0	1/1:10,0:10:5.56:148,6,0	0/1:8,0:5:11.19:11,0,35	0/1:7,0:7:9.04:9,0,32	1/1:7,0:7:11.84:104,12,0	0/1:8,0:8:9.67:45,0,10	1/1:0,11:12:9.03:257,9,0	0/1:11,0:11:40.89:66,0,41	0/0:22,0:18:21.58:0,22,253	0/1:14,0:13:7.81:8,0,53	1/1:7,0:5:14.96:121,15,0	1/1:12,0:10:23.61:168,24,0	1/1:3,0:1:2.94:18,3,0	1/1:3,0:3:8.82:54,9,0	1/1:4,0:3:5.82:39,6,0	0/0:3,0:1:2.84:0,3,14	0/0:12,0:10:0.90:0,1,109	1/1:10,0:10:23.86:184,24,0	1/1:10,0:11:26.56:266,27,0	1/1:13,0:15:24.05:301,24,0
chr10	41822826	.	T	TAA	2376.56	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-2.862;DP=264;FS=3.946;HRun=8;HaplotypeScore=39.2602;InbreedingCoeff=0.8550;MQ=62.25;MQ0=1;MQRankSum=-4.324;QD=29.34;ReadPosRankSum=-1.027;VQSLOD=2.7387;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:10:21.06:0,21,234	0/0:4,0:4:12.03:0,12,134	0/0:5,0:4:9:0,9,91	0/0:8,0:7:9.02:0,9,100	0/0:12,0:12:33.09:0,33,367	0/0:8,0:8:21.04:0,21,223	0/0:4,0:4:9.02:0,9,100	1/1:10,15:25:48.09:658,48,0	0/0:11,0:11:30.06:0,30,323	0/0:13,0:14:23.97:0,24,319	0/0:13,0:13:36.06:0,36,381	0/0:7,0:7:21.04:0,21,225	0/0:5,0:5:12.01:0,12,125	0/0:4,0:4:6.01:0,6,67	0/0:8,0:8:18.04:0,18,201	0/0:7,0:7:18.04:0,18,201	0/0:23,0:23:54.09:0,54,587	0/0:13,0:13:30.08:0,30,333	1/1:1,6:6:18.05:263,18,0	1/1:1,7:9:23.97:299,24,0	1/1:0,1:3:3.01:48,3,0	0/0:4,0:4:9:0,9,100	0/0:5,0:5:12.01:0,12,124	0/0:1,0:1:3.01:0,3,33	0/0:15,0:15:42.06:0,42,446	1/1:0,7:7:21.07:330,21,0	1/1:4,8:13:24.08:379,24,0	1/1:4,12:16:42.01:589,42,0
chr10	41822971	.	TCAGA	T	6083.11	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=13.879;DP=453;FS=12.446;HRun=0;HaplotypeScore=82.9361;InbreedingCoeff=0.9799;MQ=92.62;MQ0=0;MQRankSum=-8.176;QD=49.86;ReadPosRankSum=-0.125;VQSLOD=4.7130;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:63.22:0,63,1704	0/0:10,0:10:30.10:0,30,810	0/0:23,0:23:62.37:0,62,1626	0/0:22,0:22:52.83:0,53,1246	0/0:15,0:15:45.15:0,45,1232	0/0:27,0:27:81.26:0,81,2160	0/0:12,0:12:36.12:0,36,985	1/1:0,29:29:87.26:1577,87,0	0/0:9,0:9:27.09:0,27,714	0/0:15,0:15:45.15:0,45,1233	0/0:19,0:19:54.18:0,54,1437	0/0:13,0:13:39.13:0,39,1066	0/0:15,0:15:42.14:0,42,1149	0/0:9,0:9:24.08:0,24,648	0/0:17,0:17:48.15:0,48,1256	0/0:13,0:13:39.12:0,39,992	0/0:15,0:15:45.14:0,45,1137	0/0:15,0:15:39.08:0,39,947	1/1:3,17:20:48.07:759,48,0	1/1:1,22:23:66.08:1194,66,0	1/1:0,15:15:33.11:639,33,0	0/0:18,0:18:51.18:0,51,1396	0/0:12,0:12:36.12:0,36,985	0/0:15,0:15:42.14:0,42,1148	0/0:15,0:15:45.15:0,45,1198	1/1:0,12:12:36.12:697,36,0	1/1:0,19:19:57.20:1102,57,0	1/1:0,4:4:6.02:116,6,0
chr10	41823390	.	T	TTGTGTGTGTGTG	13694.91	PASS	AB=1.000;AC=51;AF=0.911;AN=56;BaseQRankSum=-2.116;DP=647;FS=1.340;HRun=0;HaplotypeScore=271.5171;InbreedingCoeff=0.2743;MQ=56.76;MQ0=7;MQRankSum=-1.539;QD=21.74;ReadPosRankSum=1.505;VQSLOD=3.5433;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:34,0:33:20.56:601,21,0	0/0:16,0:17:21.06:0,21,628	0/1:31,0:24:9.44:9,0,25	0/1:31,0:20:0:0,0,0	1/1:32,0:31:8.53:200,9,0	1/1:14,0:14:6.02:137,6,0	0/1:31,0:29:35.46:169,0,35	1/1:36,0:31:51.17:1495,51,0	1/1:16,0:15:6.41:174,6,0	1/1:33,0:33:51.72:1742,52,0	1/1:18,2:22:14.93:811,15,0	1/1:18,0:18:2.37:8,2,0	1/1:20,0:20:24.04:713,24,0	1/1:17,0:17:6.02:228,6,0	1/1:29,0:29:6.58:405,7,0	1/1:19,0:18:18.06:733,18,0	1/1:31,0:31:26.10:1004,26,0	1/1:22,0:21:24.08:988,24,0	1/1:20,0:19:6.49:164,6,0	1/1:28,2:31:11.44:626,11,0	1/1:25,0:23:1.39:91,1,0	1/1:22,0:22:10.69:428,11,0	1/1:20,0:20:14.93:486,15,0	1/1:14,0:14:5.36:175,5,0	1/1:13,0:13:6.01:186,6,0	1/1:20,0:19:20.76:688,21,0	1/1:16,0:14:27.08:1191,27,0	1/1:13,0:13:4.92:241,5,0
chr10	41824894	.	C	CT	7374.27	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-15.643;DP=590;FS=6.959;HRun=7;HaplotypeScore=54.9434;InbreedingCoeff=0.9975;MQ=78.33;MQ0=0;MQRankSum=-0.731;QD=30.73;ReadPosRankSum=2.662;VQSLOD=5.1856;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,29:30:78.24:942,78,0	0/0:9,0:9:24.04:0,24,232	0/0:14,0:14:24.49:0,24,231	0/0:16,0:16:35.73:0,36,307	1/1:3,31:34:90.23:1070,90,0	1/1:1,21:22:63.19:761,63,0	1/1:1,13:14:30.09:362,30,0	0/0:30,0:30:69.10:0,69,666	1/1:1,19:20:51.16:616,51,0	0/0:42,0:42:99:0,120,1156	0/0:20,0:20:51.07:0,51,492	1/1:1,14:15:42.13:506,42,0	1/1:4,18:22:48.15:580,48,0	1/1:0,20:20:57.17:689,57,0	0/0:20,0:20:51.08:0,51,492	1/1:1,21:22:54.17:652,54,0	0/0:21,0:21:60.09:0,60,579	0/0:16,0:16:42.07:0,42,405	0/0:13,0:13:36.05:0,36,343	0/0:37,0:37:93.14:0,93,898	0/0:14,0:14:36.05:0,36,348	1/1:1,13:14:30.09:362,30,0	1/1:1,17:18:48.15:580,48,0	1/1:1,8:9:21.06:254,21,0	0/0:29,0:29:75.11:0,75,724	0/0:35,0:35:90.14:0,90,868	0/0:26,0:26:72.09:0,72,685	0/0:8,0:8:18.03:0,18,173
chr10	41826153	.	GAA	G	16557.58	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=8.428;DP=536;FS=8.722;HRun=6;HaplotypeScore=157.4786;InbreedingCoeff=0.9711;MQ=76.22;MQ0=0;MQRankSum=-8.801;QD=33.72;ReadPosRankSum=5.481;VQSLOD=3.3240;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,16:18:48.13:639,48,0	0/0:9,0:9:24.07:0,24,405	0/0:15,0:15:39.11:0,39,657	0/0:21,0:21:57.17:0,57,947	1/1:1,26:27:57.09:738,57,0	1/1:1,23:24:69.23:920,69,0	1/1:1,8:9:21.07:275,21,0	1/1:2,32:34:96.26:1219,96,0	1/1:2,17:19:54.06:664,54,0	1/1:4,21:25:63.14:839,63,0	1/1:1,26:27:72.23:960,72,0	1/1:4,18:22:51.12:660,51,0	1/1:2,11:13:33.11:435,33,0	1/1:4,18:22:54.17:720,54,0	1/1:3,24:27:72.23:955,72,0	1/1:1,12:13:33.11:440,33,0	1/1:1,22:23:57.17:760,57,0	1/1:0,13:13:33.11:440,33,0	1/1:2,15:17:45.12:597,45,0	1/1:5,27:32:78.23:1040,78,0	1/1:3,9:12:27.09:360,27,0	1/1:3,11:14:33.10:440,33,0	1/1:2,19:21:57.18:760,57,0	1/1:1,7:8:14.90:200,15,0	1/1:0,16:16:48.09:618,48,0	1/1:3,18:21:54.14:720,54,0	1/1:3,28:31:78.23:1040,78,0	1/1:0,3:3:9.03:120,9,0
chr10	41826238	.	TA	T	3134.77	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=4.073;DP=542;FS=0.398;HRun=6;HaplotypeScore=71.2923;InbreedingCoeff=0.9901;MQ=64.73;MQ0=0;MQRankSum=0.118;QD=25.49;ReadPosRankSum=-0.437;VQSLOD=3.4393;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:60.11:0,60,750	0/0:12,0:12:36.12:0,36,474	0/0:11,0:11:30.10:0,30,385	0/0:9,0:9:14.11:0,14,293	0/0:32,0:32:90.25:0,90,1160	0/0:16,0:16:36.12:0,36,474	0/0:12,0:12:33.11:0,33,434	0/0:33,0:33:90.25:0,90,1164	0/0:11,0:11:33.11:0,33,434	1/1:1,25:26:75.16:796,75,0	1/1:7,18:25:60.15:645,60,0	0/0:10,0:10:27.09:0,27,355	0/0:17,0:17:48.16:0,48,631	0/0:24,0:24:66.17:0,66,849	1/1:3,27:30:78.20:838,78,0	0/0:16,0:16:42.14:0,42,550	0/0:24,0:24:66.21:0,66,865	1/1:1,14:15:33.08:355,33,0	0/0:18,0:18:51.17:0,51,666	0/0:22,0:22:57.19:0,57,750	0/0:5,0:5:15.05:0,15,197	0/0:14,0:14:33.11:0,33,434	0/0:24,0:24:69.22:0,69,908	0/0:10,0:10:30.10:0,30,395	1/1:2,25:27:63.15:677,63,0	0/0:34,1:35:73.08:0,73,1296	0/0:34,0:34:90.28:0,90,1169	0/0:7,0:7:21.07:0,21,276
chr10	41826342	.	ACTTTT	A	6282.63	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-10.935;DP=594;FS=0.821;HRun=0;HaplotypeScore=193.1615;InbreedingCoeff=0.9820;MQ=72.39;MQ0=0;MQRankSum=-11.405;QD=45.20;ReadPosRankSum=-2.156;VQSLOD=4.3645;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:69.24:0,69,2061	0/0:18,0:18:51.18:0,51,1520	0/0:18,0:17:42.14:0,42,1171	0/0:9,0:9:18.06:0,18,477	0/0:34,0:34:96.33:0,96,2772	0/0:15,0:14:39.13:0,39,1161	0/0:11,0:11:33.10:0,33,892	1/1:11,29:40:87.25:1599,87,0	0/0:29,0:29:81.28:0,81,2393	0/0:25,0:25:66.23:0,66,1975	0/0:27,0:27:78.22:0,78,2201	0/0:17,0:17:45.15:0,45,1330	0/0:14,0:14:30.10:0,30,889	0/0:24,0:24:66.23:0,66,1928	0/0:23,0:23:60.21:0,60,1770	0/0:29,0:29:81.28:0,81,2389	0/0:24,0:24:63.22:0,63,1809	0/0:15,0:15:36.12:0,36,1079	1/1:4,13:17:39.12:736,39,0	1/1:5,19:24:57.19:1138,57,0	1/1:4,5:9:9.03:180,9,0	0/0:21,0:21:63.22:0,63,1834	0/0:23,0:23:63.22:0,63,1871	0/0:15,0:15:45.09:0,45,1124	0/0:36,0:36:96.30:0,96,2667	1/1:3,24:27:75.24:1432,75,0	1/1:2,16:18:48.16:959,48,0	1/1:0,4:4:12.04:240,12,0
chr10	41826848	.	CA	C	158.02	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=1.623;DP=572;FS=5.554;HRun=1;HaplotypeScore=198.5467;InbreedingCoeff=0.9148;MQ=68.40;MQ0=0;MQRankSum=-1.076;QD=15.80;ReadPosRankSum=-0.832;VQSLOD=3.2525;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:54.18:0,54,784	0/0:13,0:13:39.09:0,39,563	0/0:17,0:17:51.14:0,51,720	0/0:15,0:15:33.09:0,33,502	0/0:16,0:16:21.07:0,21,283	0/0:18,0:18:39.13:0,39,569	0/0:11,0:11:27.08:0,27,378	0/0:23,0:23:69.23:0,69,1058	0/0:13,0:13:30.10:0,30,423	0/0:39,0:39:99:0,117,1793	0/0:22,0:22:66.08:0,66,929	0/0:16,0:16:27.09:0,27,389	0/0:8,0:8:15.05:0,15,212	0/0:30,0:30:72.23:0,72,1019	0/0:24,0:24:72.21:0,72,1100	0/0:21,0:21:45.15:0,45,652	1/1:0,10:10:18.06:249,18,0	0/0:13,0:13:33.11:0,33,515	0/0:22,0:21:63.21:0,63,966	0/0:34,0:34:99:0,102,1571	0/0:14,0:14:42.13:0,42,630	0/0:25,0:25:48.16:0,48,680	0/0:19,0:19:29.91:0,30,416	0/0:11,0:11:9.03:0,9,122	0/0:22,0:22:66.21:0,66,1011	0/0:42,0:42:99:0,126,1846	0/0:44,0:43:99:0,132,1994	0/0:8,0:8:23.99:0,24,301
chr10	41826852	.	AGGGTTCAGCTTGCTGAACCAATGAGTTTTATT	A	24277.23	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=15.118;DP=563;FS=11.786;HRun=0;HaplotypeScore=458.9206;InbreedingCoeff=0.9759;MQ=68.44;MQ0=0;MQRankSum=-13.670;QD=111.88;ReadPosRankSum=8.781;VQSLOD=2.0006;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,11:20:30.10:2516,30,0	0/0:14,0:14:39.13:0,39,5291	0/0:16,0:16:27.09:0,27,1134	0/0:14,0:14:27:0,27,1174	1/1:6,11:17:21.07:1767,21,0	1/1:5,10:15:24.08:2020,24,0	1/1:6,5:11:12.04:1010,12,0	0/0:23,0:23:63.19:0,63,5293	1/1:2,11:13:24.08:2020,24,0	0/0:39,0:39:99:0,114,13882	0/0:22,0:22:66.23:0,66,8561	1/1:6,11:17:18.06:1515,18,0	1/1:2,6:8:12.04:1010,12,0	1/1:13,17:30:42.14:3535,42,0	0/0:22,0:22:63.22:0,63,7134	1/1:9,12:21:30.10:2525,30,0	1/1:7,3:10:12.02:620,12,0	0/0:11,0:11:27.07:0,27,2474	0/0:23,0:22:57.20:0,57,5344	0/0:35,0:35:99:0,99,12246	0/0:13,0:13:36.08:0,36,4037	1/1:8,17:25:42.14:2961,42,0	1/1:8,10:18:23.81:2020,24,0	1/1:7,5:12:9.03:757,9,0	0/0:22,0:22:63.21:0,63,6481	0/0:40,0:40:99:0,108,12594	0/0:44,0:43:99:0,129,14457	0/0:8,0:8:24.08:0,24,3263
chr10	41827805	.	GA	G	12987.60	PASS	AB=1.000;AC=43;AF=0.768;AN=56;BaseQRankSum=10.994;DP=635;FS=1.145;HRun=7;HaplotypeScore=63.6243;InbreedingCoeff=0.8987;MQ=83.04;MQ0=0;MQRankSum=-1.870;QD=26.13;ReadPosRankSum=2.129;VQSLOD=5.6359;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:75.24:0,75,943	0/0:10,0:10:30.07:0,30,354	0/0:17,0:17:42.12:0,42,515	0/1:18,0:18:37.51:38,0,306	0/0:33,0:33:93.27:0,93,1153	1/1:1,21:22:60.14:612,60,0	1/1:1,16:17:42.10:429,42,0	1/1:2,22:24:66.06:637,66,0	1/1:2,22:24:57.13:582,57,0	1/1:3,26:29:72.16:735,72,0	1/1:0,23:23:63.14:642,63,0	1/1:0,19:19:51.11:520,51,0	1/1:1,22:23:60.13:612,60,0	1/1:1,20:21:54.12:551,54,0	1/1:1,28:29:78.18:796,78,0	0/0:24,0:24:69.19:0,69,833	0/0:26,0:26:72.22:0,72,891	1/1:1,9:10:21.05:214,21,0	1/1:0,16:16:48.10:483,48,0	1/1:3,34:37:99:997,99,0	1/1:0,9:9:27.06:275,27,0	1/1:1,11:12:30.07:306,30,0	1/1:2,23:25:69.16:704,69,0	1/1:1,20:21:60.14:612,60,0	1/1:0,29:29:84.19:857,84,0	1/1:1,27:28:78.17:796,78,0	1/1:3,33:36:90.20:918,90,0	1/1:1,24:25:66.15:673,66,0
chr10	41828299	.	CA	C	8620.87	PASS	AB=1.000;AC=51;AF=0.911;AN=56;BaseQRankSum=1.149;DP=601;FS=8.574;HRun=8;HaplotypeScore=88.9109;InbreedingCoeff=0.7717;MQ=71.67;MQ0=1;MQRankSum=-3.220;QD=14.76;ReadPosRankSum=2.493;VQSLOD=4.3792;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,23:25:63.10:608,63,0	0/0:11,0:11:33.10:0,33,399	0/1:11,0:11:6.21:6,0,178	0/0:6,0:6:9.02:0,9,99	1/1:6,26:32:75.11:724,75,0	1/1:1,27:28:81.13:782,81,0	1/1:2,13:15:36.06:348,36,0	1/1:4,0:34:59.07:173,59,0	1/1:1,25:26:72.12:695,72,0	1/1:2,0:41:69.35:210,69,0	1/1:4,0:22:32.59:96,33,0	1/1:1,19:20:57.09:550,57,0	1/1:2,18:20:51.08:492,51,0	1/1:0,21:21:57.09:550,57,0	1/1:2,0:29:48.89:144,49,0	1/1:1,16:17:48.08:464,48,0	1/1:6,20:26:57.08:550,57,0	1/1:0,0:4:8.15:24,8,0	1/1:6,0:22:28.99:85,29,0	1/1:3,0:32:48.88:144,49,0	1/1:1,0:11:20.37:60,20,0	1/1:2,21:23:60.09:579,60,0	1/1:2,21:23:63.10:608,63,0	1/1:1,11:12:33.05:319,33,0	1/1:2,0:22:34.63:102,35,0	1/1:3,0:35:53.58:162,54,0	1/1:2,0:23:28.45:97,28,0	1/1:0,0:9:16.30:48,16,0
chr10	41829238	.	C	CCA	7539.31	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-15.610;DP=784;FS=2.350;HRun=0;HaplotypeScore=91.5410;InbreedingCoeff=0.9635;MQ=72.17;MQ0=3;MQRankSum=-1.648;QD=35.73;ReadPosRankSum=-0.943;VQSLOD=6.7305;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,108,1344	0/0:12,0:12:27.07:0,27,327	0/0:35,0:34:52.86:0,53,904	0/0:27,0:27:59.48:0,59,681	0/0:31,0:31:78.22:0,78,956	0/0:27,0:27:75.24:0,75,947	0/0:18,0:18:51.16:0,51,642	1/1:9,24:33:69.24:1148,69,0	0/0:24,0:24:63.20:0,63,795	0/0:25,0:25:57.17:0,57,708	0/0:27,0:27:69.21:0,69,855	0/0:27,0:27:66.20:0,66,818	0/0:38,0:38:99:0,108,1361	0/0:23,0:23:57.15:0,57,691	0/0:39,0:39:99:0,108,1349	0/0:24,0:24:60.19:0,60,757	0/0:28,0:28:75.24:0,75,946	0/0:16,0:16:30.10:0,30,376	1/1:5,19:23:19.33:844,19,0	1/1:8,24:32:81.26:1290,81,0	1/1:2,26:27:57.19:947,57,0	0/0:34,0:34:87.21:0,87,1065	0/0:23,0:23:57.18:0,57,719	0/0:28,0:28:47.10:0,47,878	0/0:24,0:24:57.17:0,57,707	1/1:5,26:29:2.53:1121,3,0	1/1:7,42:50:99:1790,104,0	1/1:3,10:13:24.08:399,24,0
chr10	41829803	.	AG	A	18209.30	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=4.613;DP=638;FS=3.728;HRun=5;HaplotypeScore=61.7797;InbreedingCoeff=0.9991;MQ=83.74;MQ0=0;MQRankSum=-8.926;QD=30.97;ReadPosRankSum=5.068;VQSLOD=5.3448;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,30:31:84.24:952,84,0	0/0:9,0:9:27.09:0,27,369	0/0:23,0:22:63.66:0,64,842	0/0:18,0:17:44.89:0,45,567	1/1:1,28:29:78.22:883,78,0	1/1:1,22:23:63.18:714,63,0	1/1:2,18:20:42.12:477,42,0	1/1:2,27:29:78.20:867,78,0	1/1:1,21:22:60.17:681,60,0	1/1:0,26:26:78.22:884,78,0	1/1:0,25:25:72.21:817,72,0	1/1:0,19:19:54.15:612,54,0	1/1:0,23:23:63.18:715,63,0	1/1:2,25:27:69.20:783,69,0	1/1:1,20:21:60.17:680,60,0	1/1:0,26:26:69.20:782,69,0	1/1:1,17:18:51.14:579,51,0	1/1:0,17:17:48.05:516,48,0	1/1:0,17:17:51.13:567,51,0	1/1:3,36:39:99:1224,108,0	1/1:0,14:14:36.10:408,36,0	1/1:0,20:20:60.17:681,60,0	1/1:0,22:22:66.19:749,66,0	1/1:0,10:10:27.08:306,27,0	1/1:2,22:24:60.17:681,60,0	1/1:6,22:28:78.22:884,78,0	1/1:1,44:45:99:1395,123,0	1/1:2,11:13:33.09:374,33,0
chr10	41829900	.	C	CA	5279.24	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-14.206;DP=622;FS=0.000;HRun=8;HaplotypeScore=57.7781;InbreedingCoeff=0.9784;MQ=73.49;MQ0=0;MQRankSum=-0.108;QD=30.17;ReadPosRankSum=-0.462;VQSLOD=4.4425;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:48.03:0,48,439	0/0:10,0:10:27.01:0,27,247	0/0:16,0:16:5.66:0,6,282	0/0:10,0:9:20.93:0,21,177	0/0:35,0:35:96.03:0,96,874	0/0:32,0:32:87.04:0,87,796	0/0:9,0:9:24.01:0,24,220	1/1:5,31:36:87.26:1004,87,0	0/0:20,0:20:50.99:0,51,457	0/0:35,1:36:67.42:0,67,869	0/0:25,0:25:72:0,72,649	0/0:16,0:16:42.02:0,42,384	0/0:16,0:16:39:0,39,352	0/0:20,0:20:60.03:0,60,549	0/0:26,0:26:78.02:0,78,709	0/0:23,0:23:63.03:0,63,577	0/0:14,0:14:39.02:0,39,357	0/0:19,0:19:48.02:0,48,439	1/1:4,14:18:42.12:485,42,0	1/1:2,22:24:69.20:796,69,0	1/1:1,14:15:39.12:450,39,0	0/0:29,0:29:75.01:0,75,681	0/0:28,0:28:78.03:0,78,709	0/0:11,0:11:29.99:0,30,269	0/0:34,1:35:66.21:0,66,846	1/1:7,32:39:71.82:1081,72,0	1/1:1,22:23:69.20:791,69,0	1/1:0,19:20:60.01:672,60,0
chr10	41834066	.	CA	C	3891.81	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=15.312;DP=662;FS=2.286;HRun=4;HaplotypeScore=74.5207;InbreedingCoeff=0.9833;MQ=82.04;MQ0=0;MQRankSum=-1.710;QD=36.37;ReadPosRankSum=2.277;VQSLOD=4.0254;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,120,1734	0/0:10,0:10:30.10:0,30,449	0/0:18,0:18:42.02:0,42,552	0/0:18,0:18:9.57:0,10,331	0/0:22,0:22:60.20:0,60,897	0/0:22,0:22:63.20:0,63,924	0/0:19,0:19:57.19:0,57,849	0/0:31,0:31:81.27:0,81,1212	0/0:22,0:22:66.22:0,66,985	1/1:0,31:31:93.30:1207,93,0	1/1:0,14:14:42.14:545,42,0	0/0:20,0:20:60.19:0,60,880	0/0:37,0:37:99:0,111,1622	0/0:22,0:22:60.20:0,60,892	1/1:1,24:25:66.21:857,66,0	0/0:32,0:32:93.31:0,93,1391	0/0:29,0:29:87.28:0,87,1280	1/1:1,17:18:51.16:659,51,0	0/0:32,0:32:90.30:0,90,1323	0/0:28,0:28:78.23:0,78,1108	0/0:43,0:43:99:0,123,1796	0/0:15,0:15:45.15:0,45,672	0/0:13,0:13:39.13:0,39,585	0/0:21,0:21:63.17:0,63,917	1/1:0,19:19:48.16:623,48,0	0/0:19,1:20:21.24:0,21,816	0/0:33,0:32:99:0,99,1461	0/0:5,0:5:15.05:0,15,225
chr10	41835631	.	CA	C	701.46	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=1.838;DP=754;FS=0.856;HRun=1;HaplotypeScore=105.6310;InbreedingCoeff=0.9703;MQ=86.65;MQ0=0;MQRankSum=-4.031;QD=31.88;ReadPosRankSum=1.391;VQSLOD=3.4308;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,102,1593	0/0:4,0:4:12.04:0,12,192	0/0:32,0:32:96.30:0,96,1455	0/0:18,0:18:54.14:0,54,805	0/0:30,0:30:90.27:0,90,1390	0/0:34,0:34:99:0,102,1581	0/0:29,0:29:87.28:0,87,1364	0/0:34,0:34:99:0,99,1456	0/0:31,0:31:93.30:0,93,1462	0/0:32,0:32:96.33:0,96,1518	0/0:28,0:28:84.29:0,84,1340	0/0:24,0:24:72.22:0,72,1102	0/0:22,0:22:66.18:0,66,995	0/0:32,0:32:93.29:0,93,1439	0/0:27,0:27:81.25:0,81,1248	0/0:35,0:35:99:0,105,1652	1/1:0,22:22:57.19:796,57,0	0/0:18,0:17:48.16:0,48,765	0/0:16,0:16:48.16:0,48,768	0/0:32,0:32:96.33:0,96,1532	0/0:28,0:28:78.23:0,78,1213	0/0:21,0:21:60.19:0,60,934	0/0:21,0:21:63.20:0,63,984	0/0:42,0:42:99:0,126,1938	0/0:29,0:29:87.27:0,87,1344	0/0:36,0:36:99:0,108,1691	0/0:27,0:27:81.28:0,81,1291	0/0:15,0:15:42.14:0,42,667
chr10	41836006	.	C	CA	4031.98	PASS	AB=0.931;AC=11;AF=0.196;AN=56;BaseQRankSum=-13.844;DP=621;FS=16.278;HRun=1;HaplotypeScore=71.7048;InbreedingCoeff=0.8926;MQ=92.60;MQ0=0;MQRankSum=-2.534;QD=32.26;ReadPosRankSum=1.360;VQSLOD=2.0711;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,138,1790	0/0:7,0:7:21.07:0,21,273	0/0:33,0:34:88.84:0,89,1129	0/0:29,0:29:75.13:0,75,947	0/0:31,0:31:84.26:0,84,1076	0/0:14,0:14:42.14:0,42,545	0/0:16,0:16:48.14:0,48,609	0/0:22,0:22:66.21:0,66,857	0/0:19,0:19:57.18:0,57,738	1/1:0,15:15:45.15:673,45,0	1/1:0,18:18:51.17:764,51,0	0/0:20,0:20:60.18:0,60,764	0/0:12,0:12:36.12:0,36,465	0/0:24,0:24:72.22:0,72,920	1/1:1,24:25:66.22:989,66,0	0/0:34,0:34:99:0,99,1285	0/0:21,0:21:63.16:0,63,782	1/1:3,12:15:39.10:560,39,0	0/0:12,0:12:36.12:0,36,466	0/0:35,0:35:99:0,99,1281	0/0:26,0:26:72.23:0,72,935	0/0:21,0:21:60.19:0,60,779	0/0:13,0:13:36.12:0,36,464	0/0:16,0:16:48.16:0,48,623	1/1:0,25:25:69.23:1034,69,0	0/1:25,2:27:11.71:12,0,854	0/0:22,0:22:66.17:0,66,813	0/0:21,0:21:63.20:0,63,815
chr10	41836280	.	C	CT	638.02	PASS	AB=0.983;AC=4;AF=0.071;AN=56;BaseQRankSum=-4.410;DP=614;FS=4.030;HRun=7;HaplotypeScore=91.5092;InbreedingCoeff=0.3764;MQ=70.42;MQ0=0;MQRankSum=0.716;QD=7.42;ReadPosRankSum=-3.758;VQSLOD=0.3870;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:48.08:0,48,464	0/0:16,0:16:42.06:0,42,406	0/0:8,0:8:14.89:0,15,131	0/0:11,0:11:12.45:0,12,108	0/0:32,0:32:93.15:0,93,898	0/0:31,0:31:90.14:0,90,865	0/0:14,0:14:42.06:0,42,401	0/1:36,0:36:77.98:78,0,144	0/0:19,0:19:51.08:0,51,492	0/1:27,1:28:59.10:59,0,126	0/0:37,1:38:19.72:0,20,227	0/0:18,0:18:51.07:0,51,486	0/0:21,0:21:60.09:0,60,579	0/0:22,0:22:60.08:0,60,574	0/0:14,0:14:26.81:0,27,93	0/0:21,0:21:60.06:0,60,569	1/1:4,18:22:51.16:616,51,0	0/0:20,0:20:29.87:0,30,175	0/0:29,0:29:45.04:0,45,194	0/0:36,0:36:87.24:0,87,350	0/0:4,0:4:7.85:0,8,30	0/0:21,0:21:54.08:0,54,521	0/0:24,0:24:69.10:0,69,662	0/0:11,0:11:30.05:0,30,290	0/0:30,0:30:75.58:0,76,275	0/0:33,0:33:37.51:0,38,203	0/0:25,0:24:38.51:0,39,208	0/0:12,0:12:1.23:0,1,77
chr10	41837404	.	T	TCCTC	2221.82	PASS	AB=0.994;AC=23;AF=0.442;AN=52;BaseQRankSum=2.873;DP=275;FS=0.540;HRun=0;HaplotypeScore=176.2714;InbreedingCoeff=0.0619;MQ=31.77;MQ0=1;MQRankSum=-1.948;QD=12.55;ReadPosRankSum=-0.816;VQSLOD=3.0620;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:19:2.14:0,2,164	0/1:6,0:6:24.89:25,0,36	./.	./.	0/0:15,0:14:25.37:0,25,141	0/1:16,0:16:40.26:221,0,40	0/1:13,0:13:24.03:24,0,64	0/0:19,0:13:33.10:0,33,162	0/1:10,0:10:9.80:129,0,10	0/1:13,1:14:1.03:161,0,1	1/1:1,5:6:11.96:179,12,0	0/1:15,0:14:35.67:242,0,36	0/1:11,0:11:35.61:133,0,36	0/1:9,0:8:13.10:178,0,13	1/1:8,2:9:0.94:143,1,0	0/1:11,0:11:4.08:4,0,115	0/0:5,0:5:12.65:0,13,72	1/1:4,1:5:14.78:150,15,0	0/0:5,0:5:5.71:0,6,32	0/1:13,0:13:5.73:6,0,141	0/0:4,0:4:5.93:0,6,40	0/1:12,0:12:12.72:161,0,13	1/1:8,0:8:9.03:111,9,0	1/1:3,0:3:3.01:36,3,0	1/1:10,5:15:8.13:482,8,0	0/0:12,0:12:24.15:0,24,154	0/0:15,0:15:37.49:0,37,226	0/0:3,0:3:5.88:0,6,36
chr10	41837424	.	C	CCCTT	4572.57	PASS	AB=1.000;AC=25;AF=0.446;AN=56;BaseQRankSum=0.201;DP=363;FS=2.309;HRun=0;HaplotypeScore=142.6188;InbreedingCoeff=0.5792;MQ=45.54;MQ0=2;MQRankSum=-5.416;QD=24.32;ReadPosRankSum=3.253;VQSLOD=4.4193;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:42.01:0,42,573	0/0:4,0:4:12.04:0,12,202	0/1:13,0:8:40.97:41,0,158	0/0:9,0:7:11.99:0,12,114	0/0:21,0:20:47.95:0,48,629	1/1:16,3:19:47.95:743,48,0	1/1:12,0:12:8.96:117,9,0	0/0:25,0:22:39.08:0,39,439	1/1:1,10:12:12.04:296,12,0	0/1:20,0:20:80.84:193,0,81	0/1:8,0:8:33.94:184,0,34	1/1:10,5:15:33.10:649,33,0	1/1:13,2:15:30.03:555,30,0	1/1:6,3:9:26.61:439,27,0	0/1:13,0:12:68.87:205,0,69	0/0:10,0:10:21.06:0,21,303	0/0:13,0:13:38.69:0,39,425	0/1:7,0:7:45.98:81,0,46	0/0:7,0:7:15.02:0,15,181	0/0:20,0:20:46.84:0,47,547	0/0:8,0:8:21:0,21,248	1/1:1,9:10:15.05:370,15,0	1/1:2,12:15:11.70:235,12,0	1/1:1,7:8:3.01:74,3,0	1/1:11,0:11:24.05:389,24,0	0/0:18,0:18:28.14:0,28,676	0/0:12,0:12:30.10:0,30,488	0/0:5,0:5:14.96:0,15,167
chr10	41837548	.	CA	C	3026.35	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=6.028;DP=559;FS=0.000;HRun=8;HaplotypeScore=68.6543;InbreedingCoeff=0.9968;MQ=77.29;MQ0=1;MQRankSum=0.580;QD=23.28;ReadPosRankSum=-0.265;VQSLOD=3.8553;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:65.79:0,66,771	0/0:8,0:8:21.06:0,21,254	0/0:33,0:30:24.72:0,25,442	0/0:17,0:16:31.63:0,32,330	0/0:30,0:30:72.20:0,72,848	0/0:18,0:18:51.16:0,51,616	0/0:21,0:21:51.11:0,51,600	1/1:1,19:20:57.07:544,57,0	0/0:18,0:18:42.13:0,42,507	0/0:20,0:20:48.14:0,48,568	0/0:13,0:13:36.11:0,36,426	0/0:25,0:24:63.19:0,63,751	0/0:26,0:26:72.20:0,72,846	0/0:23,0:23:60.17:0,60,712	0/0:22,0:21:60.17:0,60,712	0/0:14,0:14:30.09:0,30,362	0/0:23,0:23:63.19:0,63,759	0/0:16,1:17:19.17:0,19,514	1/1:1,10:11:30.05:290,30,0	1/1:4,25:29:69.10:666,69,0	1/1:1,18:19:48.08:464,48,0	0/0:16,0:16:48:0,48,509	0/0:22,0:22:48.15:0,48,579	0/0:23,0:23:63.19:0,63,761	0/0:15,0:15:39.12:0,39,470	1/1:2,22:24:60.05:566,60,0	1/1:1,19:20:51.08:492,51,0	1/1:0,7:7:21.03:203,21,0
chr10	41837787	.	TC	T	6703.93	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=5.096;DP=676;FS=6.859;HRun=1;HaplotypeScore=105.0171;InbreedingCoeff=0.9992;MQ=80.20;MQ0=0;MQRankSum=-5.946;QD=38.09;ReadPosRankSum=-0.904;VQSLOD=4.2315;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,102,1628	0/0:7,0:7:21.04:0,21,309	0/0:19,0:19:50.94:0,51,625	0/0:20,0:20:56.77:0,57,815	0/0:28,0:28:81.28:0,81,1282	0/0:38,0:38:99:0,114,1791	0/0:21,0:21:63.19:0,63,961	1/1:0,30:30:90.26:1207,90,0	0/0:26,0:26:78.20:0,78,1148	0/0:26,0:26:78.21:0,78,1172	0/0:21,0:21:63.20:0,63,971	0/0:29,0:29:87.26:0,87,1317	0/0:18,0:18:51.16:0,51,791	0/0:25,0:25:75.23:0,75,1148	0/0:29,0:29:87.27:0,87,1343	0/0:28,0:28:84.23:0,84,1249	0/0:22,0:22:66.20:0,66,1026	0/0:26,0:26:78.24:0,78,1221	1/1:0,20:20:60.11:749,60,0	1/1:0,31:31:87.05:1162,87,0	1/1:1,23:24:46.96:821,47,0	0/0:21,0:21:57.19:0,57,908	0/0:18,0:18:51.09:0,51,678	0/0:18,0:18:54.18:0,54,862	0/0:25,0:25:69.21:0,69,1076	1/1:0,27:27:81.27:1131,81,0	1/1:0,34:34:87.29:1216,87,0	1/1:0,10:10:30.10:419,30,0
chr10	41839112	.	T	TG	4869.27	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-11.837;DP=590;FS=2.129;HRun=6;HaplotypeScore=61.7495;InbreedingCoeff=0.9906;MQ=76.65;MQ0=0;MQRankSum=-0.410;QD=29.33;ReadPosRankSum=4.678;VQSLOD=5.3947;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:60.47:0,60,801	0/0:10,0:10:30.07:0,30,306	0/0:21,0:21:36.01:0,36,421	0/0:26,0:25:60.10:0,60,598	0/0:19,0:19:45.09:0,45,452	1/1:0,15:15:42.13:528,42,0	1/1:2,26:28:69.22:862,69,0	0/0:22,0:22:57.11:0,57,572	1/1:0,10:10:27.09:340,27,0	0/0:18,0:18:51.11:0,51,520	0/0:19,0:19:42.09:0,42,428	1/1:4,20:24:51.16:642,51,0	1/1:2,9:11:24.08:302,24,0	1/1:3,16:19:48.14:601,48,0	0/0:31,0:31:78.16:0,78,789	0/0:24,0:23:66.62:0,67,674	0/0:26,0:26:69.15:0,69,704	0/0:23,0:23:66.14:0,66,672	0/0:15,0:15:36.08:0,36,367	0/0:16,1:17:10.37:0,10,420	0/0:39,0:40:99:0,108,1100	1/1:2,18:20:48.15:604,48,0	1/1:1,11:12:18.06:224,18,0	1/1:3,24:27:40.77:767,41,0	0/0:28,0:28:57.11:0,57,575	0/0:19,0:19:45.10:0,45,459	0/0:26,0:26:72.16:0,72,735	0/0:7,0:7:21.05:0,21,214
chr10	41841180	.	A	AT	8711.71	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-15.151;DP=679;FS=1.357;HRun=1;HaplotypeScore=61.1894;InbreedingCoeff=0.9995;MQ=74.91;MQ0=0;MQRankSum=0.142;QD=40.15;ReadPosRankSum=2.207;VQSLOD=5.5498;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,114,1461	0/0:14,0:14:42.14:0,42,545	0/0:10,0:10:23.26:0,23,342	0/0:18,0:18:41.04:0,41,474	0/0:27,0:27:81.26:0,81,1051	1/1:0,23:23:63.21:944,63,0	1/1:0,26:26:72.24:1079,72,0	0/0:35,0:35:99:0,102,1291	1/1:2,18:20:51.17:754,51,0	0/0:23,0:23:69.22:0,69,896	0/0:23,0:23:69.22:0,69,895	1/1:0,17:17:45.15:674,45,0	1/1:2,27:29:72.24:1079,72,0	1/1:0,24:24:60.20:899,60,0	0/0:40,0:40:99:0,120,1558	0/0:30,0:30:84.26:0,84,1075	0/0:29,0:29:81.26:0,81,1050	0/0:17,0:17:51.14:0,51,644	0/0:23,0:23:66.19:0,66,830	0/0:34,0:34:99:0,102,1312	0/0:14,0:14:39.13:0,39,506	1/1:0,21:21:63.21:944,63,0	1/1:0,30:30:90.30:1349,90,0	1/1:0,27:27:66.22:989,66,0	0/0:25,0:25:75.23:0,75,961	0/0:25,0:25:75.23:0,75,961	0/0:25,0:25:75.24:0,75,969	0/0:11,0:11:30.08:0,30,373
chr10	41841485	.	G	GA	7808.58	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-16.261;DP=722;FS=4.510;HRun=6;HaplotypeScore=65.0157;InbreedingCoeff=0.9999;MQ=84.10;MQ0=0;MQRankSum=-1.108;QD=32.67;ReadPosRankSum=1.680;VQSLOD=5.2026;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:66.14:0,66,673	0/0:16,0:16:42.09:0,42,428	0/0:17,0:17:33.06:0,33,332	0/0:26,0:26:40.17:0,40,415	0/0:37,0:37:99:0,102,1040	1/1:5,29:34:81.26:1019,81,0	1/1:1,21:21:57.18:717,57,0	0/0:41,0:41:98.68:0,99,971	1/1:1,30:31:87.28:1094,87,0	0/0:26,0:26:78.13:0,78,778	0/0:28,0:28:81.18:0,81,826	1/1:2,19:21:57.18:714,57,0	1/1:3,25:28:75.24:944,75,0	1/1:3,27:30:75.24:944,75,0	0/0:28,0:28:78.17:0,78,791	0/0:34,0:34:96.18:0,96,959	0/0:21,0:21:54.09:0,54,541	0/0:12,0:12:33.07:0,33,336	0/0:18,0:18:51.10:0,51,509	0/0:28,0:28:78.18:0,78,795	0/0:21,0:21:63.14:0,63,643	1/1:2,23:25:69.22:868,69,0	1/1:5,19:24:57.18:717,57,0	1/1:1,23:24:63.20:793,63,0	0/0:26,0:26:75.17:0,75,765	0/0:35,0:35:93.21:0,93,949	0/0:29,0:29:87.20:0,87,888	0/0:15,0:15:39.09:0,39,398
chr10	41842352	.	TATAC	T	2197.67	PASS	AB=0.935;AC=22;AF=0.393;AN=56;BaseQRankSum=8.638;DP=621;FS=1.962;HRun=0;HaplotypeScore=125.9355;InbreedingCoeff=0.4685;MQ=57.78;MQ0=12;MQRankSum=-1.821;QD=7.45;ReadPosRankSum=3.543;VQSLOD=2.8236;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:56.71:0,57,435	0/0:12,0:12:23.03:0,23,221	0/0:38,0:22:53.04:0,53,560	0/0:40,0:29:84.04:0,84,869	0/0:15,0:15:15.92:0,16,207	0/1:15,0:16:3.97:264,0,4	1/1:11,3:17:29.33:307,29,0	0/0:23,0:22:62.18:0,62,502	1/1:2,20:22:6.02:119,6,0	0/0:23,0:23:30.36:0,30,421	0/0:16,0:16:25.13:0,25,239	1/1:14,0:14:32.51:264,33,0	1/1:15,2:18:39.20:418,39,0	1/1:23,0:22:59.04:475,59,0	0/0:32,0:32:13.81:0,14,352	0/1:32,0:31:39.67:40,0,234	0/1:22,0:22:1.01:1,0,140	0/0:14,0:14:22.67:0,23,200	0/0:10,0:10:29.82:0,30,238	0/1:26,0:26:51.99:52,0,261	0/0:49,0:47:93.46:0,93,984	1/1:11,1:11:25.77:230,26,0	1/1:1,16:16:2.38:59,2,0	0/1:4,25:28:0.52:125,0,1	0/1:16,0:16:11.24:11,0,81	0/1:23,0:23:2.71:3,0,420	0/0:17,0:17:21.83:0,22,342	0/1:8,0:7:18.93:19,0,98
chr10	41842354	.	TACACACACACACACAC	T	3634.83	PASS	AB=0.693;AC=14;AF=0.250;AN=56;BaseQRankSum=7.034;DP=626;FS=61.043;HRun=0;HaplotypeScore=230.2114;InbreedingCoeff=0.5625;MQ=55.77;MQ0=14;MQRankSum=-7.563;QD=21.51;ReadPosRankSum=-0.833;VQSLOD=0.8687;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:38:2.98:0,3,22	0/0:8,0:11:8.06:0,8,262	0/0:36,0:20:3.01:0,3,42	0/0:38,0:27:0.47:0,0,1	0/1:10,0:16:17.65:18,0,111	0/0:15,0:15:24.07:0,24,774	0/0:18,0:18:15.01:0,15,597	0/0:23,0:22:21.90:0,22,370	0/0:24,0:24:6.02:0,6,280	1/1:19,4:23:6.61:761,7,0	1/1:13,4:16:5.38:140,5,0	0/0:16,0:16:22.77:0,23,487	0/0:18,0:18:31.52:0,32,950	0/0:25,0:23:36.08:0,36,910	1/1:17,14:31:12.88:940,13,0	0/1:15,2:30:8.78:859,0,9	1/1:11,1:21:9.03:282,9,0	1/1:10,4:14:3.01:131,3,0	0/0:11,0:11:12.04:0,12,303	0/0:17,0:27:30.10:0,30,1046	0/0:48,0:46:72.68:0,73,2289	0/0:12,0:11:9.03:0,9,337	0/0:19,0:18:2.59:0,3,140	0/0:30,0:30:12.04:0,12,561	1/1:5,10:15:12.04:504,12,0	0/0:19,0:23:33.06:0,33,992	0/0:17,0:17:27.09:0,27,946	0/0:6,0:7:6.02:0,6,168
chr10	41843199	.	ACTGTGACTGGAG	A	490.35	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.677;DP=636;FS=4.280;HRun=0;HaplotypeScore=207.7798;InbreedingCoeff=0.9833;MQ=92.21;MQ0=0;MQRankSum=-3.817;QD=37.72;ReadPosRankSum=2.273;VQSLOD=3.1734;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,105,5772	0/0:13,0:13:36.12:0,36,2254	0/0:29,0:29:81.24:0,81,3713	0/0:26,0:26:71.79:0,72,2826	0/0:19,0:19:54.19:0,54,3191	0/0:24,0:24:72.25:0,72,4110	0/0:15,0:15:45.15:0,45,2303	0/0:28,0:28:81.28:0,81,4241	0/0:28,0:28:84.27:0,84,4111	0/0:31,0:31:87.28:0,87,4531	0/0:15,0:15:45.15:0,45,2674	0/0:19,0:19:54.18:0,54,2948	0/0:19,0:19:57.20:0,57,3256	0/0:22,0:22:66.21:0,66,3626	0/0:31,0:31:93.32:0,93,5209	0/0:31,0:31:93.32:0,93,5359	1/1:0,13:13:15.05:579,15,0	0/0:11,0:11:33.11:0,33,1291	0/0:31,0:31:81.25:0,81,4500	0/0:28,0:28:84.29:0,84,4746	0/0:30,0:30:90.31:0,90,5066	0/0:18,0:18:54.19:0,54,3181	0/0:21,0:21:63.22:0,63,3283	0/0:24,0:24:69.22:0,69,4012	0/0:14,0:14:39.13:0,39,2440	0/0:21,0:21:63.22:0,63,3652	0/0:29,0:29:87.30:0,87,4462	0/0:11,0:11:33.10:0,33,1706
chr10	41843454	.	TA	T	3383.52	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=5.203;DP=820;FS=13.579;HRun=3;HaplotypeScore=91.4588;InbreedingCoeff=0.9985;MQ=84.81;MQ0=0;MQRankSum=-1.807;QD=34.53;ReadPosRankSum=3.378;VQSLOD=2.9070;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,47:48:99:1636,132,0	0/0:17,0:17:51.17:0,51,734	0/0:31,0:31:81.19:0,81,1085	0/0:23,0:23:63.18:0,63,843	1/1:0,20:20:60.19:744,60,0	0/0:30,0:30:90.30:0,90,1294	0/0:30,0:30:90.30:0,90,1292	0/0:33,0:33:90.24:0,90,1241	0/0:35,0:35:99:0,105,1475	0/0:43,0:43:99:0,123,1764	0/0:26,0:26:78.22:0,78,1083	0/0:25,0:25:72.23:0,72,1012	0/0:33,0:33:96.31:0,96,1364	0/0:32,0:32:90.26:0,90,1233	0/0:38,0:38:99:0,114,1638	1/1:1,29:30:81.25:1004,81,0	0/0:26,0:26:72.24:0,72,1034	0/0:13,0:13:36.10:0,36,499	0/0:27,0:27:72.22:0,72,1001	0/0:39,0:39:99:0,114,1604	0/0:36,0:36:99:0,108,1548	0/0:18,0:18:51.16:0,51,710	0/0:33,0:33:93.31:0,93,1339	0/0:20,0:20:57.19:0,57,821	0/0:29,0:28:87.29:0,87,1252	0/0:43,0:42:99:0,126,1746	0/0:35,0:35:99:0,102,1431	0/0:7,0:7:21.05:0,21,283
chr10	41843812	.	T	TC	22260.61	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=-13.896;DP=626;FS=0.762;HRun=0;HaplotypeScore=56.9249;InbreedingCoeff=0.9965;MQ=79.99;MQ0=1;MQRankSum=-3.171;QD=44.97;ReadPosRankSum=0.906;VQSLOD=4.9431;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:66.22:0,66,923	0/0:19,0:19:54.16:0,54,738	0/0:19,0:19:48.12:0,48,600	0/0:13,0:12:26.89:0,27,335	0/0:27,0:27:81.27:0,81,1133	1/1:1,22:23:63.21:1007,63,0	1/1:0,15:15:42.14:672,42,0	1/1:1,33:34:99:1502,99,0	1/1:0,22:22:60.20:959,60,0	1/1:0,35:35:99:1656,105,0	1/1:0,32:32:96.33:1535,96,0	1/1:1,16:18:48.16:760,48,0	1/1:0,18:18:54.18:863,54,0	1/1:1,16:17:45.15:720,45,0	1/1:0,15:15:45.15:720,45,0	0/0:13,0:13:39.11:0,39,525	0/0:17,0:17:51.17:0,51,709	1/1:0,16:16:45.15:719,45,0	1/1:4,24:28:81.24:1238,81,0	1/1:1,41:42:99:1775,111,0	1/1:0,12:12:36.12:576,36,0	1/1:0,28:28:84.29:1343,84,0	1/1:1,24:25:66.23:1055,66,0	1/1:0,13:13:39.13:624,39,0	1/1:0,28:28:78.27:1247,78,0	1/1:3,27:30:81.28:1296,81,0	1/1:0,33:33:96.33:1534,96,0	1/1:1,10:11:14.54:461,15,0
chr10	41845685	.	ATC	A	7750.82	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=17.900;DP=690;FS=3.193;HRun=0;HaplotypeScore=99.7729;InbreedingCoeff=0.9975;MQ=89.55;MQ0=0;MQRankSum=-2.225;QD=41.23;ReadPosRankSum=2.395;VQSLOD=6.8317;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:90.31:0,90,1737	0/0:6,0:6:18.06:0,18,348	0/0:31,0:31:84.23:0,84,1491	0/0:22,0:22:58.74:0,59,1122	0/0:39,0:39:99:0,117,2225	0/0:18,0:18:51.17:0,51,976	0/0:14,0:14:42.13:0,42,777	1/1:3,28:31:81.24:1192,81,0	0/0:26,0:26:78.27:0,78,1507	0/0:36,0:36:99:0,102,1971	0/0:29,0:29:84.29:0,84,1623	0/0:31,0:31:93.31:0,93,1763	0/0:20,0:20:60.21:0,60,1146	0/0:30,0:30:90.28:0,90,1668	0/0:17,0:17:51.16:0,51,952	0/0:20,0:20:60.19:0,60,1126	0/0:19,0:19:57.17:0,57,1064	0/0:9,0:9:27.09:0,27,521	1/1:1,19:20:57.18:852,57,0	1/1:0,40:40:99:1607,105,0	1/1:0,22:22:57.19:873,57,0	0/0:24,0:24:72.23:0,72,1322	0/0:31,0:31:93.32:0,93,1796	0/0:18,0:18:54.15:0,54,973	0/0:29,0:29:81.28:0,81,1565	1/1:1,26:27:20.27:1068,20,0	1/1:0,33:33:96.33:1470,96,0	1/1:0,15:15:45.15:689,45,0
chr10	41847357	.	ATT	A	6245.71	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=10.926;DP=546;FS=27.738;HRun=3;HaplotypeScore=127.3572;InbreedingCoeff=0.9879;MQ=82.92;MQ0=0;MQRankSum=-7.536;QD=39.53;ReadPosRankSum=-0.806;VQSLOD=2.9349;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:30.10:0,30,580	0/0:12,0:12:36.12:0,36,696	0/0:21,0:21:42.96:0,43,845	0/0:16,0:16:38.72:0,39,770	0/0:37,0:37:99:0,108,2075	0/0:15,0:15:39.13:0,39,749	0/0:5,0:5:15.05:0,15,290	1/1:4,27:31:81.26:1219,81,0	0/0:19,0:19:54.19:0,54,1027	0/0:36,0:36:99:0,108,2054	0/0:22,0:22:66.23:0,66,1261	0/0:8,0:8:24.08:0,24,444	0/0:14,0:14:42.14:0,42,811	0/0:13,0:13:39.12:0,39,720	0/0:23,0:23:69.24:0,69,1333	0/0:21,0:21:63.22:0,63,1203	0/0:30,0:30:87.30:0,87,1665	0/0:5,0:5:15.03:0,15,256	1/1:3,12:15:33.08:462,33,0	1/1:1,30:31:87.29:1324,87,0	1/1:3,17:20:48.16:716,48,0	0/0:24,0:24:69.22:0,69,1298	0/0:19,0:19:57.19:0,57,1075	0/0:9,0:9:27.09:0,27,521	0/0:29,0:29:87.30:0,87,1668	1/1:3,26:29:78.26:1194,78,0	1/1:2,26:28:75.25:1148,75,0	1/1:0,4:4:12.04:184,12,0
chr10	41848506	.	T	TG	110.71	PASS	AB=0.900;AC=8;AF=0.333;AN=24;BaseQRankSum=0.604;DP=47;FS=1.815;HRun=0;HaplotypeScore=36.6155;InbreedingCoeff=0.3407;MQ=42.36;MQ0=3;MQRankSum=-2.704;QD=6.15;ReadPosRankSum=-0.223;VQSLOD=2.6183;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:4:9.01:0,9,105	./.	./.	./.	./.	./.	./.	0/1:6,2:7:60.60:81,0,61	./.	./.	./.	./.	./.	./.	./.	0/0:3,0:3:6.02:0,6,83	0/0:8,0:7:18.01:0,18,227	0/0:3,0:2:6.02:0,6,71	0/0:3,0:3:5.99:0,6,47	0/1:1,0:1:0:0,0,0	1/1:4,1:5:2.85:33,3,0	./.	./.	./.	0/0:4,0:4:0:0,0,0	1/1:1,1:2:2.90:43,3,0	1/1:1,1:2:2.92:46,3,0	0/0:3,0:2:2.22:0,2,7
chr10	41851565	.	CTCTCT	C	19651.70	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=1.255;DP=638;FS=14.100;HRun=0;HaplotypeScore=164.7131;InbreedingCoeff=0.9639;MQ=76.54;MQ0=66;MQRankSum=-10.741;QD=39.94;ReadPosRankSum=7.625;VQSLOD=3.4728;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,23:24:48.16:1021,48,0	0/0:14,0:14:36.12:0,36,1010	0/0:56,0:44:99:0,114,2507	0/0:76,0:52:99:0,102,2325	1/1:3,25:25:50.15:1084,50,0	1/1:6,17:20:48.16:1022,48,0	1/1:5,10:12:21.07:407,21,0	1/1:5,20:21:60.20:1184,60,0	1/1:3,17:18:48.16:1022,48,0	1/1:14,14:21:51.17:998,51,0	1/1:7,8:10:24.08:463,24,0	1/1:1,15:16:39.13:823,39,0	1/1:1,9:9:27.09:575,27,0	1/1:3,16:17:42.62:895,43,0	1/1:4,11:13:24.08:468,24,0	1/1:4,16:18:39.13:830,39,0	1/1:5,15:18:20.91:616,21,0	1/1:5,4:7:9.03:187,9,0	1/1:9,8:14:39.05:777,39,0	1/1:8,30:36:93.28:1729,93,0	1/1:11,8:14:14.46:231,14,0	1/1:7,19:21:54.19:1141,54,0	1/1:3,9:11:19.74:445,20,0	1/1:6,19:19:33.11:702,33,0	1/1:4,14:17:45.10:884,45,0	1/1:3,22:22:57.18:1121,57,0	1/1:6,10:12:33.11:650,33,0	1/1:1,6:6:18.06:373,18,0
chr10	41851569	.	CT	C	3963.76	PASS	AB=0.909;AC=49;AF=0.875;AN=56;BaseQRankSum=6.469;DP=634;FS=9.715;HRun=2;HaplotypeScore=180.2247;InbreedingCoeff=0.8004;MQ=74.95;MQ0=97;MQRankSum=-10.284;QD=8.02;ReadPosRankSum=7.763;VQSLOD=0.1610;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:23:42.36:197,42,0	0/0:13,0:13:36.12:0,36,540	0/0:54,0:42:99:0,109,1453	0/0:70,3:49:96.06:0,96,1246	1/1:29,0:24:44.70:192,45,0	1/1:21,0:17:42.10:181,42,0	1/1:15,0:10:19.41:152,19,0	1/1:25,0:20:52.93:295,53,0	1/1:21,0:17:41.95:179,42,0	1/1:28,1:19:8.20:182,8,0	1/1:13,1:8:21.40:87,21,0	1/1:15,0:15:34.54:175,35,0	1/1:10,0:9:23.52:92,24,0	1/1:19,0:17:36.76:159,37,0	1/1:16,1:13:21.62:92,22,0	1/1:17,1:15:34.16:149,34,0	1/1:20,0:16:17.32:114,17,0	0/1:9,1:5:25.67:42,0,26	1/1:16,0:13:32.61:187,33,0	1/1:37,1:33:77.59:371,78,0	1/1:17,3:14:13.66:68,14,0	1/1:26,0:20:47.97:246,48,0	1/1:12,0:9:18.17:70,18,0	1/1:26,0:19:29.33:135,29,0	1/1:17,0:16:37.50:155,37,0	1/1:26,0:21:49.24:233,49,0	1/1:17,0:11:29.84:144,30,0	1/1:6,1:6:16.07:67,16,0
chr10	41851570	.	T	TCTC	7993.18	PASS	AB=0.989;AC=29;AF=0.518;AN=56;BaseQRankSum=5.642;DP=644;FS=35.413;HRun=0;HaplotypeScore=182.1313;InbreedingCoeff=0.4980;MQ=72.67;MQ0=105;MQRankSum=-14.374;QD=21.32;ReadPosRankSum=-2.601;VQSLOD=2.8679;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:23:9.94:10,0,192	0/0:13,0:13:36.12:0,36,671	0/0:53,0:42:99:0,113,1706	0/0:70,0:46:99:0,102,1532	0/0:29,0:24:12.65:0,13,231	0/0:20,0:17:9.01:0,9,213	0/1:16,0:11:48.46:96,0,48	1/1:24,0:21:60.15:962,60,0	0/0:21,0:17:18.73:0,19,240	1/1:24,0:18:18.23:755,18,0	1/1:12,0:8:24.07:405,24,0	0/1:15,0:15:26.35:26,0,158	0/0:10,0:9:18.58:0,19,135	0/0:19,0:17:11.98:0,12,204	1/1:15,0:13:24.07:408,24,0	0/0:18,0:15:8.63:0,9,178	0/1:21,0:16:9.75:10,0,150	0/1:10,0:5:5.33:137,0,5	1/1:17,2:17:51.16:855,51,0	1/1:38,0:32:87.27:1476,87,0	1/1:20,0:13:16.56:185,17,0	0/1:26,0:20:43.36:43,0,209	0/0:13,0:9:20.59:0,21,126	0/1:25,0:19:19.55:20,0,96	1/1:16,0:15:42.14:760,42,0	1/1:25,0:21:54.15:932,54,0	1/1:15,1:11:33.11:584,33,0	1/1:8,0:6:18.06:329,18,0
chr10	41851580	.	CTCT	C	6303.73	PASS	AB=0.828;AC=23;AF=0.411;AN=56;BaseQRankSum=11.277;DP=622;FS=33.054;HRun=0;HaplotypeScore=174.7949;InbreedingCoeff=0.7587;MQ=65.08;MQ0=129;MQRankSum=-13.029;QD=24.53;ReadPosRankSum=0.723;VQSLOD=3.1492;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:20:42.14:0,42,815	0/0:13,0:12:33.11:0,33,743	0/0:43,0:32:53.70:0,54,978	0/0:58,2:37:52.28:0,52,1181	0/0:29,0:24:47.92:0,48,908	0/0:21,0:16:45.10:0,45,866	0/1:16,0:8:17.38:17,0,178	1/1:12,15:19:18.26:686,18,0	0/0:22,0:17:45.15:0,45,871	0/1:17,13:16:18.38:586,0,18	1/1:6,8:8:24.07:360,24,0	0/0:16,0:13:28.65:0,29,610	0/0:14,0:9:27.04:0,27,473	0/0:21,0:16:42.14:0,42,841	1/1:10,10:13:24.08:363,24,0	0/0:17,0:14:36.12:0,36,690	0/0:20,0:13:30.05:0,30,524	0/1:8,3:5:52.85:111,0,53	1/1:13,9:16:10.35:512,10,0	1/1:6,30:31:84.26:1293,84,0	1/1:12,7:11:9.76:144,10,0	0/0:27,0:20:11.64:0,12,793	0/0:13,0:8:21.54:0,22,392	0/0:26,0:20:29.97:0,30,499	1/1:3,14:15:42.14:670,42,0	1/1:5,17:16:48.16:774,48,0	1/1:5,10:11:33.09:499,33,0	1/1:2,6:6:18.06:289,18,0
chr10	41851712	.	CT	C	1758.43	PASS	AB=0.806;AC=11;AF=0.196;AN=56;BaseQRankSum=1.088;DP=817;FS=6.709;HRun=2;HaplotypeScore=128.4572;InbreedingCoeff=-0.2401;MQ=43.05;MQ0=127;MQRankSum=-0.905;QD=4.82;ReadPosRankSum=3.869;VQSLOD=0.7450;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:15:38.52:0,39,472	0/0:9,0:8:14.94:0,15,224	0/0:57,0:14:24.72:0,25,384	0/1:94,0:17:26.76:27,0,209	0/0:16,0:15:26.98:0,27,331	0/0:23,1:16:41.70:0,42,495	0/0:21,1:18:49:0,49,676	0/1:20,13:15:99:305,0,222	0/0:28,2:24:27.14:0,27,803	0/1:30,5:24:99:112,0,480	0/1:25,8:22:99:112,0,166	0/0:22,1:19:39.06:0,39,535	0/0:16,0:14:32.90:0,33,453	0/0:21,1:17:46.19:0,46,575	0/0:18,4:14:24.49:0,24,101	0/0:21,0:16:44.14:0,44,622	0/0:44,2:32:40.57:0,41,988	0/1:20,1:14:6.01:6,0,320	0/1:21,8:10:58.79:280,0,59	0/1:18,8:15:99:197,0,144	0/1:13,11:19:99:129,0,157	0/0:33,0:28:69.23:0,69,1024	0/0:37,1:33:76.50:0,76,1104	0/0:25,1:19:27.99:0,28,377	0/0:23,1:14:33.28:0,33,399	0/1:17,17:24:99:551,0,244	0/1:19,10:17:99:156,0,192	0/1:6,1:3:30.51:31,0,73
chr10	41851719	.	CTCTCTCTCTG	C	806.86	PASS	AB=1.000;AC=15;AF=0.288;AN=52;BaseQRankSum=1.399;DP=783;FS=0.000;HRun=0;HaplotypeScore=200.0976;InbreedingCoeff=0.2465;MQ=44.17;MQ0=101;MQRankSum=-0.144;QD=2.93;ReadPosRankSum=-0.706;VQSLOD=2.5905;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:15:14.98:309,15,0	0/0:9,0:8:3.01:0,3,73	./.	0/0:94,0:17:0:0,0,0	./.	0/0:24,0:16:5.60:0,6,59	0/0:24,0:18:17.91:0,18,201	0/0:24,0:17:5.92:0,6,49	0/1:29,0:24:6.88:7,0,169	0/1:26,0:23:6.07:60,0,6	0/0:27,0:20:5.77:0,6,35	0/0:24,0:20:6:0,6,57	0/0:18,0:14:6.37:0,6,103	0/0:25,0:18:12.10:0,12,117	1/1:20,0:14:2.10:5,2,0	1/1:21,0:16:12.04:312,12,0	0/1:45,0:34:14.91:155,0,15	0/1:19,0:14:19.37:19,0,73	0/1:23,0:10:0:0,0,0	0/0:22,0:16:5.07:0,5,23	0/0:26,0:19:2.63:0,3,11	0/0:31,0:29:16.58:0,17,320	0/0:42,0:37:40.61:0,41,474	0/0:28,0:21:9.02:0,9,134	0/0:18,0:13:3.85:0,4,10	0/1:33,0:24:6.95:54,0,7	0/1:29,0:17:2.24:2,0,37	1/1:6,0:3:5.54:24,6,0
chr10	41851729	.	G	GTC	1706.93	PASS	AB=0.911;AC=19;AF=0.339;AN=56;BaseQRankSum=3.604;DP=749;FS=7.286;HRun=0;HaplotypeScore=142.0515;InbreedingCoeff=0.2271;MQ=44.62;MQ0=85;MQRankSum=-1.836;QD=6.14;ReadPosRankSum=-0.390;VQSLOD=2.8086;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:18:46.77:47,0,174	0/0:9,0:9:6.11:0,6,113	0/0:51,0:10:4.34:0,4,37	0/0:88,0:14:5.84:0,6,53	0/0:14,0:14:15.03:0,15,175	0/0:24,0:18:21.07:0,21,273	0/0:27,0:18:14.12:0,14,371	0/1:19,0:13:8.58:9,0,93	0/0:33,0:28:28.51:0,29,557	1/1:22,0:21:29.37:489,29,0	1/1:22,0:19:35.89:431,36,0	0/0:27,0:22:29.99:0,30,339	0/0:20,0:15:27.09:0,27,353	0/0:25,0:20:34.59:0,35,412	1/1:22,0:16:9.03:143,9,0	0/1:19,6:19:99:122,0,176	0/0:40,0:34:51.67:0,52,572	0/1:17,0:13:23.14:109,0,23	0/1:17,0:11:13.55:14,0,39	0/1:14,5:15:18.09:40,0,18	0/1:23,2:20:7.14:37,0,7	0/0:33,0:32:54.10:0,54,670	0/0:43,0:40:59.22:0,59,744	0/0:34,0:27:27.09:0,27,342	1/1:12,0:11:9.02:103,9,0	0/1:20,5:21:12.56:195,0,13	0/1:17,4:13:13.50:96,0,13	1/1:6,2:4:4.57:52,5,0
chr10	41851737	.	CTG	C	290.59	PASS	AB=0.953;AC=7;AF=0.125;AN=56;BaseQRankSum=2.321;DP=702;FS=0.740;HRun=0;HaplotypeScore=142.1867;InbreedingCoeff=0.3734;MQ=43.66;MQ0=83;MQRankSum=-0.583;QD=2.02;ReadPosRankSum=-2.924;VQSLOD=1.7945;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:22:32.07:0,32,425	0/0:10,0:10:8.70:0,9,172	0/0:39,0:6:8.66:0,9,60	0/1:62,0:9:0.85:1,0,18	0/0:18,0:18:20.79:0,21,224	0/0:26,0:20:33.05:0,33,493	0/0:23,0:15:14.03:0,14,550	0/0:17,0:10:26.84:0,27,277	0/0:30,0:24:56.72:0,57,792	0/1:19,1:17:13.79:184,0,14	1/1:22,0:19:1.77:128,2,0	0/0:27,0:22:38.96:0,39,558	0/0:23,0:17:38.88:0,39,561	0/0:25,0:20:39:0,39,570	1/1:22,1:16:8.64:57,9,0	0/0:27,0:21:34.30:0,34,415	0/0:44,1:37:27.27:0,27,794	0/1:14,1:12:37.74:38,0,50	0/0:13,0:7:20.89:0,21,229	0/0:19,0:15:18.02:0,18,229	0/0:20,0:14:12.01:0,12,164	0/0:31,0:29:55.33:0,55,936	0/0:45,0:42:71.22:0,71,1215	0/0:35,0:28:32.95:0,33,514	0/0:8,1:8:2.68:0,3,8	0/0:23,0:18:47.61:0,48,474	0/0:18,0:10:20.98:0,21,294	0/0:8,0:4:5.93:0,6,55
chr10	41851749	.	G	GTC	548.14	PASS	AB=1.000;AC=7;AF=0.135;AN=52;BaseQRankSum=0.933;DP=615;FS=7.668;HRun=0;HaplotypeScore=130.5292;InbreedingCoeff=0.1778;MQ=39.87;MQ0=87;MQRankSum=-0.692;QD=3.75;ReadPosRankSum=0.429;VQSLOD=2.0859;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:25:99:144,0,183	0/0:10,0:10:2.70:0,3,39	./.	./.	0/0:17,0:17:9.02:0,9,103	0/0:26,0:19:21.07:0,21,271	0/0:24,0:14:18.05:0,18,219	0/0:18,0:12:25.63:0,26,170	0/0:27,0:22:43.64:0,44,563	0/1:14,0:11:7.49:7,0,37	0/0:14,0:10:7.69:0,8,54	0/0:29,0:23:19.60:0,20,261	0/0:26,0:20:34.04:0,34,468	0/0:21,0:16:20.99:0,21,226	0/1:16,0:10:0:0,0,0	0/1:28,0:20:15.16:15,0,208	1/1:29,12:33:13.87:491,14,0	0/1:12,0:11:6.63:7,0,93	0/0:13,0:5:8.30:0,8,44	0/0:15,0:11:3.58:0,4,43	0/0:15,0:12:2.96:0,3,19	0/0:30,0:28:37.34:0,37,442	0/0:45,0:42:63.16:0,63,780	0/0:36,0:28:24.08:0,24,310	0/0:4,0:4:4.98:0,5,23	0/0:18,0:13:30.81:0,31,150	0/0:21,0:10:17.68:0,18,119	0/0:10,0:5:8.78:0,9,56
chr10	41851757	.	CTG	C	724.21	PASS	AB=0.904;AC=10;AF=0.192;AN=52;BaseQRankSum=3.269;DP=628;FS=0.669;HRun=0;HaplotypeScore=125.9614;InbreedingCoeff=-0.2288;MQ=37.10;MQ0=106;MQRankSum=-4.459;QD=2.82;ReadPosRankSum=0.274;VQSLOD=2.1965;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:30,2:24:99:133,0,309	0/0:10,0:10:2.68:0,3,57	./.	./.	0/0:19,0:19:12.03:0,12,198	0/0:25,0:16:6.30:0,6,297	0/0:28,0:15:10.67:0,11,80	0/1:14,4:10:74.66:156,0,75	0/1:28,0:22:12.25:12,0,439	0/0:17,0:9:18.07:0,18,126	0/0:16,0:9:8.90:0,9,67	0/0:27,0:21:19.67:0,20,310	0/0:26,0:21:31.76:0,32,536	0/1:22,0:17:18.16:18,0,200	0/0:16,1:7:0:0,0,0	0/1:31,1:23:0.43:0,0,407	0/1:51,1:33:99:123,0,234	0/1:17,0:14:11.22:11,0,90	0/0:14,0:4:11.01:0,11,67	0/0:11,9:9:5.90:0,6,38	0/0:20,2:10:2.98:0,3,21	0/0:27,0:25:41.86:0,42,374	0/0:43,0:41:48.79:0,49,665	0/0:40,1:29:16.23:0,16,399	0/0:8,0:5:5.84:0,6,36	0/1:14,9:11:26.20:286,0,26	0/1:14,7:9:28.72:62,0,29	0/1:10,2:6:53.15:53,0,60
chr10	41851763	.	CTCTCTCTG	C	37.49	PASS	AB=0.927;AC=12;AF=0.261;AN=46;BaseQRankSum=4.554;DP=660;FS=3.331;HRun=0;HaplotypeScore=149.6602;InbreedingCoeff=0.3030;MQ=34.12;MQ0=130;MQRankSum=-3.645;QD=0.16;ReadPosRankSum=0.746;VQSLOD=2.4016;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:34,0:25:15.86:16,0,319	0/1:2,7:9:0:0,0,0	./.	./.	0/0:20,0:19:12.04:0,12,244	0/0:25,0:16:18.05:0,18,357	0/0:29,0:15:3.01:0,3,34	1/1:19,0:10:6.40:56,6,0	0/0:32,0:25:37.60:0,38,556	1/1:19,0:9:6.05:40,6,0	0/0:14,0:7:0:0,0,0	0/0:27,0:19:15.05:0,15,326	0/0:29,0:22:19.05:0,19,611	0/0:26,0:21:21.07:0,21,361	0/0:16,0:7:0:0,0,0	0/1:38,0:24:0.86:1,0,478	0/1:57,0:34:1.09:1,0,276	0/0:24,0:17:4.59:0,5,21	1/1:13,0:3:4.04:16,4,0	./.	./.	0/1:27,0:24:2.42:2,0,330	0/0:41,0:39:37.46:0,37,613	0/0:45,0:31:32.48:0,32,545	./.	0/1:20,0:8:23.94:24,0,37	0/0:20,0:8:3.73:0,4,21	0/0:15,0:7:6.83:0,7,44
chr10	41851765	.	C	CTG	428.59	PASS	AB=0.931;AC=15;AF=0.313;AN=48;BaseQRankSum=5.603;DP=701;FS=28.044;HRun=0;HaplotypeScore=123.5473;InbreedingCoeff=0.0869;MQ=32.97;MQ0=160;MQRankSum=-4.422;QD=1.44;ReadPosRankSum=-0.345;VQSLOD=0.8644;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:40,1:25:87.97:88,0,238	0/0:10,0:9:2.70:0,3,46	./.	./.	0/0:23,0:20:12.04:0,12,178	0/0:28,0:16:20.77:0,21,283	0/0:28,1:15:14.88:0,15,120	0/1:18,0:9:22.37:22,0,46	0/0:32,0:24:44.87:0,45,491	0/1:22,2:10:57.65:96,0,58	0/1:13,3:9:0.02:0,0,0	0/0:26,2:19:20.20:0,20,253	0/1:27,3:23:16.01:16,0,479	0/0:26,0:21:26.66:0,27,323	0/0:14,2:7:1.24:0,1,3	0/0:40,0:24:26.63:0,27,399	0/1:57,6:35:24.83:25,0,229	0/1:21,3:15:71.26:93,0,71	0/1:12,1:3:14.49:52,0,14	./.	./.	0/0:28,0:24:18.01:0,18,332	0/0:41,0:37:50.25:0,50,598	0/0:49,3:31:32.90:0,33,422	1/1:6,2:4:2.64:11,3,0	1/1:22,0:8:19.21:81,19,0	1/1:21,0:8:6.38:51,6,0	0/1:18,0:7:39.44:39,0,46
chr10	41851783	.	CTG	C	191.60	PASS	AB=0.948;AC=11;AF=0.239;AN=46;BaseQRankSum=6.310;DP=1040;FS=1.882;HRun=0;HaplotypeScore=111.0632;InbreedingCoeff=-0.0221;MQ=25.88;MQ0=362;MQRankSum=-1.168;QD=0.48;ReadPosRankSum=-5.907;VQSLOD=0.4572;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:26:12.03:0,12,338	0/1:9,0:7:0:0,0,0	./.	./.	0/0:37,0:20:12.04:0,12,231	0/0:39,0:20:14.96:0,15,289	./.	0/0:28,0:5:14.80:0,15,132	0/0:50,0:23:0.62:0,1,379	0/1:43,0:14:48.86:49,0,169	0/1:18,3:12:0.02:0,0,0	0/0:43,0:24:13.57:0,14,287	0/1:52,0:30:39.20:39,0,526	0/0:46,0:25:18.06:0,18,347	1/1:39,5:12:0.78:2,1,0	0/0:56,0:29:35.28:0,35,690	0/1:85,0:40:6.04:6,0,362	0/1:40,3:19:99:111,0,160	0/0:18,0:3:6.02:0,6,97	./.	./.	0/1:33,0:22:56.90:57,0,209	0/1:48,0:37:36.23:36,0,428	0/0:88,0:39:6.34:0,6,459	0/1:11,7:11:0:0,0,0	0/0:28,0:7:20.85:0,21,292	0/0:27,0:4:2.92:0,3,18	0/0:27,0:11:2.17:0,2,163
chr10	41851863	.	G	GTC	5024.10	PASS	AB=0.831;AC=15;AF=0.268;AN=56;BaseQRankSum=-8.007;DP=1300;FS=0.910;HRun=0;HaplotypeScore=140.2392;InbreedingCoeff=0.5775;MQ=32.92;MQ0=385;MQRankSum=5.601;QD=9.02;ReadPosRankSum=1.811;VQSLOD=4.7360;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:68,0:34:4.21:0,4,45	0/0:9,0:6:15.05:0,15,206	0/0:6,0:4:9.02:0,9,100	0/0:10,0:8:17.45:0,17,171	0/0:36,0:24:2.71:0,3,27	1/1:44,8:35:32.71:575,33,0	1/1:31,20:25:27.09:480,27,0	0/0:42,0:16:48.16:0,48,653	0/1:40,15:29:1.06:640,0,1	0/0:67,0:38:99:0,103,1323	0/0:38,0:28:30.52:0,31,414	0/1:35,16:33:15.94:354,0,16	0/1:46,19:42:60.45:874,0,60	1/1:32,14:27:24.55:427,25,0	0/0:65,0:28:42.01:0,42,576	0/1:49,1:29:32.02:32,0,148	0/0:81,0:45:59.21:0,59,908	0/0:45,0:19:36.12:0,36,491	0/0:38,0:11:22.70:0,23,312	0/0:31,0:24:54.62:0,55,709	0/0:81,0:36:46.10:0,46,594	1/1:31,17:25:15.86:316,16,0	1/1:24,22:28:44.21:779,44,0	0/1:76,16:46:1.48:548,0,1	0/0:37,0:26:38.79:0,39,496	0/0:30,0:19:48.21:0,48,655	0/0:33,0:15:29.31:0,29,377	0/0:25,0:17:30.10:0,30,411
chr10	41851879	.	CTCTCTG	C	317.22	PASS	AB=0.667;AC=5;AF=0.089;AN=56;BaseQRankSum=3.262;DP=997;FS=5.040;HRun=0;HaplotypeScore=202.9589;InbreedingCoeff=0.5479;MQ=45.15;MQ0=166;MQRankSum=-3.300;QD=2.76;ReadPosRankSum=-0.382;VQSLOD=2.5079;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:19,34:39:2.28:65,2,0	0/0:6,0:6:15.05:0,15,511	0/0:19,0:14:41:0,41,664	0/0:26,0:22:32.78:0,33,742	1/1:6,22:23:2.15:65,2,0	0/0:38,0:31:44.79:0,45,1147	0/0:43,0:31:46.10:0,46,1263	0/0:33,0:21:48.06:0,48,1190	0/0:39,0:27:58.43:0,58,1538	0/0:55,0:42:99:0,117,3330	0/0:33,0:27:43.56:0,44,1300	0/0:39,0:30:32.79:0,33,887	0/0:45,0:33:70.79:0,71,1943	0/0:29,0:22:33.58:0,34,890	0/0:44,0:25:45.15:0,45,1448	0/1:17,17:27:99:291,0,103	0/0:60,0:44:85.72:0,86,2108	0/0:30,0:20:40.63:0,41,1124	0/0:32,0:18:48.15:0,48,1040	0/0:30,0:27:66.06:0,66,1804	0/0:50,0:33:51.61:0,52,1458	0/0:30,0:22:22.32:0,22,704	0/0:35,0:27:63.02:0,63,1624	0/0:57,0:38:54.17:0,54,1318	0/0:29,0:26:44.03:0,44,1290	0/0:30,0:25:69.20:0,69,1836	0/0:32,0:24:63.21:0,63,1547	0/0:15,0:11:27.09:0,27,807
chr10	41854349	.	AAC	A	956.70	PASS	AB=0.877;AC=18;AF=0.360;AN=50;BaseQRankSum=-0.291;DP=567;FS=0.691;HRun=0;HaplotypeScore=98.4892;InbreedingCoeff=0.5181;MQ=71.67;MQ0=8;MQRankSum=1.916;QD=4.56;ReadPosRankSum=1.713;VQSLOD=2.0839;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:30:48.01:0,48,517	0/0:1,0:1:3.01:0,3,45	./.	./.	0/1:10,0:10:24.53:25,0,81	1/1:10,0:18:8.99:43,9,0	0/1:14,0:23:16.44:64,0,16	0/0:19,0:19:20.89:0,21,179	1/1:8,7:16:8.86:80,9,0	0/0:26,0:25:19.48:0,19,164	./.	1/1:9,6:16:20.75:194,21,0	1/1:12,5:17:12.50:133,13,0	0/1:7,2:9:25.48:25,0,33	0/0:11,0:16:5.79:0,6,51	0/0:19,0:27:21.03:0,21,251	0/1:32,0:35:35.08:35,0,334	0/0:9,0:18:6.48:0,6,65	0/0:15,0:14:17.63:0,18,183	0/0:16,0:17:6.78:0,7,42	0/0:21,0:23:14.86:0,15,108	1/1:14,4:20:14.70:127,15,0	1/1:12,6:19:14.87:146,15,0	1/1:11,15:25:24.06:264,24,0	0/0:23,0:28:6:0,6,51	0/0:16,0:23:29.64:0,30,274	0/0:21,0:21:11.84:0,12,98	0/0:5,0:5:9.01:0,9,94
chr10	41856000	.	ATTTT	A	9831.45	PASS	AC=22;AF=0.407;AN=54;BaseQRankSum=16.797;DP=486;FS=3.015;HRun=6;HaplotypeScore=115.4966;InbreedingCoeff=0.9975;MQ=54.77;MQ0=1;MQRankSum=-12.542;QD=47.73;ReadPosRankSum=0.825;VQSLOD=3.2571;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:36.12:0,36,986	0/0:16,0:16:48.16:0,48,1313	0/0:17,0:13:30.10:0,30,727	0/0:13,0:8:22.61:0,23,493	0/0:27,0:27:75.26:0,75,2058	0/0:18,0:18:54.19:0,54,1476	0/0:12,0:12:33.11:0,33,904	1/1:2,18:20:39.13:730,39,0	0/0:20,0:20:60.21:0,60,1643	1/1:1,21:22:66.23:1234,66,0	1/1:1,26:27:69.23:1238,69,0	0/0:19,0:19:57.20:0,57,1554	0/0:17,0:17:51.18:0,51,1384	0/0:13,0:13:36.12:0,36,965	1/1:2,23:25:69.24:1272,69,0	0/0:20,0:20:60.21:0,60,1632	0/0:18,0:18:35.22:0,35,1355	1/1:0,7:7:21.07:393,21,0	1/1:3,10:13:30.10:562,30,0	1/1:0,19:19:57.15:1013,57,0	1/1:0,7:7:18.02:245,18,0	0/0:20,0:20:60.19:0,60,1536	0/0:26,0:26:78.27:0,78,2137	0/0:11,0:11:33.11:0,33,903	1/1:0,18:18:42.14:751,42,0	1/1:2,20:22:60.20:1123,60,0	1/1:0,26:26:69.24:1272,69,0	./.
chr10	41856969	.	C	CT	7329.31	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-10.535;DP=472;FS=2.592;HRun=2;HaplotypeScore=45.0607;InbreedingCoeff=0.9929;MQ=83.72;MQ0=0;MQRankSum=-3.771;QD=37.78;ReadPosRankSum=-0.001;VQSLOD=5.0204;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:96.30:0,96,1189	0/0:9,0:9:27.08:0,27,335	0/0:20,0:19:51.15:0,51,620	0/0:18,0:18:41.96:0,42,487	0/0:27,0:27:78.25:0,78,967	0/0:13,0:13:36.10:0,36,434	0/0:14,0:14:39.11:0,39,470	1/1:4,28:32:84.27:1189,84,0	0/0:23,0:23:69.19:0,69,830	1/1:1,12:13:33.11:475,33,0	1/1:0,20:20:54.18:777,54,0	0/0:11,0:11:30.09:0,30,372	0/0:15,0:15:45.14:0,45,558	0/0:15,0:15:45.14:0,45,558	1/1:0,6:6:18.06:259,18,0	0/0:13,0:13:39.11:0,39,471	0/0:20,0:20:60.19:0,60,744	1/1:2,7:9:18.06:259,18,0	1/1:1,20:21:60.17:824,60,0	1/1:1,28:29:78.26:1123,78,0	1/1:0,13:13:30.10:432,30,0	0/0:11,0:11:30.09:0,30,372	0/0:15,0:15:39.12:0,39,483	0/0:21,0:21:63.11:0,63,746	1/1:1,11:12:30.10:432,30,0	1/1:0,22:22:63.18:868,63,0	1/1:0,12:12:36.12:518,36,0	1/1:1,4:5:12.04:173,12,0
chr10	41857167	.	A	AC	9454.33	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=14.807;DP=560;FS=2.864;HRun=0;HaplotypeScore=77.3024;InbreedingCoeff=0.9988;MQ=87.24;MQ0=0;MQRankSum=-8.985;QD=43.17;ReadPosRankSum=2.371;VQSLOD=5.5237;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,156,2098	0/0:8,0:8:24.08:0,24,335	0/0:24,0:23:66.14:0,66,863	0/0:24,0:24:71.85:0,72,870	0/0:30,0:30:81.24:0,81,1095	0/0:24,0:23:66.20:0,66,904	0/0:13,0:13:39.11:0,39,527	1/1:0,22:20:60.17:913,60,0	0/0:23,0:23:66.19:0,66,888	1/1:0,21:20:63.17:948,63,0	1/1:0,23:22:57.19:908,57,0	0/0:15,0:15:45.14:0,45,611	0/0:17,0:17:51.17:0,51,712	0/0:24,0:24:72.23:0,72,983	1/1:0,16:16:48.08:733,48,0	0/0:12,0:12:36.11:0,36,486	0/0:23,0:23:69.23:0,69,962	1/1:0,8:8:24.08:382,24,0	1/1:0,14:13:39.13:620,39,0	1/1:1,19:19:51.17:814,51,0	1/1:0,17:17:48.08:733,48,0	0/0:19,0:19:57.17:0,57,777	0/0:19,0:19:57.19:0,57,797	0/0:13,0:13:39.03:0,39,504	1/1:1,21:22:57.11:879,57,0	1/1:0,31:31:93.20:1425,93,0	1/1:1,17:18:48.16:765,48,0	1/1:0,7:7:21.07:335,21,0
chr10	41857525	.	GA	G	2438.34	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=14.932;DP=721;FS=3.532;HRun=1;HaplotypeScore=96.2363;InbreedingCoeff=0.9728;MQ=53.71;MQ0=32;MQRankSum=6.438;QD=9.68;ReadPosRankSum=1.390;VQSLOD=1.5987;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:34:96.29:0,96,1480	0/0:13,0:13:39.13:0,39,612	0/0:32,0:4:11.99:0,12,163	0/0:22,0:6:15.01:0,15,195	0/0:34,0:33:90.27:0,90,1385	1/1:22,0:22:35.16:226,35,0	1/1:27,1:28:5.15:229,5,0	0/0:28,0:18:54.18:0,54,857	1/1:37,1:38:95.38:442,95,0	0/0:22,0:21:57.18:0,57,870	0/0:17,0:15:36.12:0,36,573	1/1:28,1:29:23.49:247,23,0	1/1:27,0:27:45.27:279,45,0	1/1:31,1:32:57.45:355,57,0	0/0:23,0:23:66.14:0,66,989	0/0:23,0:23:69.22:0,69,1077	0/0:31,0:31:93.32:0,93,1482	0/0:19,0:19:54.10:0,54,784	0/0:19,0:11:30.09:0,30,429	0/0:16,0:16:48.15:0,48,743	0/0:62,0:62:99:0,156,2457	1/1:22,1:23:36.68:288,37,0	1/1:16,1:17:47.32:251,47,0	1/1:36,0:36:60.70:333,61,0	0/0:20,0:18:48.16:0,48,751	0/0:21,0:19:57.19:0,57,886	0/0:20,0:19:51.17:0,51,806	0/0:12,0:12:33.11:0,33,518
chr10	41857526	.	AC	A	7893.69	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=3.301;DP=724;FS=3.056;HRun=4;HaplotypeScore=77.7181;InbreedingCoeff=0.9859;MQ=53.60;MQ0=34;MQRankSum=3.030;QD=31.70;ReadPosRankSum=0.430;VQSLOD=5.3740;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:34:96.30:0,96,1323	0/0:13,0:13:39.13:0,39,545	0/0:34,0:4:9.03:0,9,126	0/0:23,0:6:12.04:0,12,168	0/0:34,0:33:87.26:0,87,1184	1/1:1,21:22:63.19:756,63,0	1/1:5,23:28:60.01:666,60,0	0/0:28,0:18:54.18:0,54,756	1/1:1,37:38:99:1258,105,0	0/0:21,0:20:57.18:0,57,768	0/0:18,0:16:36.12:0,36,503	1/1:1,26:27:72.22:863,72,0	1/1:0,26:26:72.22:863,72,0	1/1:2,30:32:87.27:1042,87,0	0/0:23,0:23:63.14:0,63,857	0/0:23,0:23:66.21:0,66,907	0/0:33,0:32:96.30:0,96,1311	0/0:19,0:19:51.17:0,51,706	0/0:19,0:11:27.09:0,27,378	0/0:16,0:16:45.15:0,45,630	0/0:62,0:62:99:0,153,2120	1/1:2,21:23:63.19:754,63,0	1/1:1,16:17:51.16:610,51,0	1/1:2,34:36:90.28:1080,90,0	0/0:20,0:18:54.16:0,54,723	0/0:22,0:20:57.19:0,57,798	0/0:20,0:19:51.17:0,51,714	0/0:12,0:12:33.07:0,33,408
chr10	41857863	.	T	TA	9585.72	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=7.191;DP=581;FS=2.718;HRun=2;HaplotypeScore=99.0623;InbreedingCoeff=0.9999;MQ=60.22;MQ0=2;MQRankSum=3.420;QD=38.65;ReadPosRankSum=0.518;VQSLOD=4.8228;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:75.22:0,75,915	0/0:12,0:12:36.09:0,36,422	0/0:20,0:14:42.07:0,42,478	0/0:26,0:21:54.16:0,54,650	0/0:19,0:19:57.15:0,57,680	0/0:37,0:37:90.11:0,90,1058	0/0:13,0:13:39.12:0,39,480	1/1:3,30:31:84.24:1136,84,0	0/0:22,0:22:57.18:0,57,705	1/1:2,17:19:48.14:672,48,0	1/1:0,17:17:48.16:684,48,0	0/0:14,0:14:38.85:0,39,458	0/0:22,0:22:60.15:0,60,723	0/0:19,0:19:51.16:0,51,631	1/1:0,18:18:51.17:734,51,0	0/0:24,0:24:69.20:0,69,843	0/0:16,0:16:48.15:0,48,595	1/1:1,25:26:69.23:993,69,0	1/1:0,19:19:57.18:799,57,0	1/1:2,18:20:51.17:734,51,0	1/1:0,19:19:57.19:821,57,0	0/0:18,0:18:45.13:0,45,544	0/0:23,0:22:62.41:0,62,748	0/0:19,0:19:57.18:0,57,706	1/1:0,15:15:45.15:648,45,0	1/1:0,25:25:75.25:1079,75,0	1/1:4,20:24:57.19:812,57,0	1/1:0,13:13:33.11:475,33,0
chr10	41858173	.	GAAGTAAGA	G	6163.58	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=12.983;DP=655;FS=7.601;HRun=0;HaplotypeScore=194.1409;InbreedingCoeff=0.9592;MQ=57.76;MQ0=0;MQRankSum=-13.580;QD=44.66;ReadPosRankSum=0.085;VQSLOD=3.9418;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:49:99:0,144,6054	0/0:11,0:11:33.11:0,33,1455	0/0:31,0:25:71.60:0,72,2706	0/0:24,0:21:54.17:0,54,1922	0/0:28,0:28:84.29:0,84,3793	1/1:0,17:17:21.07:568,21,0	1/1:1,13:13:3.01:54,3,0	0/0:24,0:24:69.24:0,69,3029	1/1:0,12:12:15.05:438,15,0	0/0:30,0:30:84.29:0,84,3632	0/0:15,0:15:45.15:0,45,1891	1/1:0,11:11:27.09:789,27,0	1/1:2,15:18:27.09:777,27,0	1/1:1,13:14:24.08:690,24,0	0/0:25,0:25:72.25:0,72,3070	0/0:34,0:34:99:0,102,4403	0/0:28,0:28:84.29:0,84,3477	0/0:19,0:19:54.19:0,54,2345	0/0:28,0:27:72.72:0,73,3132	0/0:31,0:31:93.32:0,93,3995	0/0:37,0:37:99:0,111,4699	1/1:0,17:17:45.02:1125,45,0	1/1:1,25:26:57.20:1461,57,0	1/1:0,9:9:9.03:263,9,0	0/0:17,0:17:51.16:0,51,2036	0/0:35,0:35:99:0,102,4622	0/0:37,0:37:99:0,108,4541	0/0:13,0:13:39.13:0,39,1757
chr10	41858303	.	ACTACTAACCCAGGGATGGCACCAC	A	12586.03	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=13.002;DP=631;FS=13.340;HRun=0;HaplotypeScore=361.3651;InbreedingCoeff=0.9555;MQ=53.97;MQ0=8;MQRankSum=-12.461;QD=105.76;ReadPosRankSum=6.117;VQSLOD=3.0622;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:59,0:59:99:0,178,17363	0/0:12,0:11:33.11:0,33,3413	0/0:33,0:12:36.10:0,36,1902	0/0:20,0:9:27.09:0,27,962	0/0:17,0:17:51.18:0,51,4831	1/1:1,13:14:27.09:1796,27,0	1/1:1,10:9:18.06:1197,18,0	0/0:20,0:20:57.20:0,57,4724	1/1:0,18:16:21.07:1397,21,0	0/0:27,0:27:81.27:0,81,7479	0/0:19,0:19:54.16:0,54,5076	1/1:3,9:12:9.03:599,9,0	1/1:0,15:15:30.10:1996,30,0	1/1:0,10:10:12.04:798,12,0	0/0:31,0:31:93.32:0,93,9021	0/0:31,0:31:93.31:0,93,8681	0/0:34,0:34:99:0,102,10278	0/0:30,0:30:90.29:0,90,8636	0/0:38,0:31:84.28:0,84,6875	0/0:28,0:28:81.28:0,81,8161	0/0:32,0:32:96.28:0,96,7603	1/1:3,16:19:27.09:1796,27,0	1/1:4,15:19:48.12:2849,48,0	1/1:0,1:1:3.01:158,3,0	0/0:14,0:14:39.13:0,39,3594	0/0:28,0:28:84.29:0,84,8906	0/0:29,0:29:84.26:0,84,7363	0/0:10,0:10:30.10:0,30,2921
chr10	41858491	.	TA	T	5394.92	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=12.778;DP=601;FS=8.574;HRun=7;HaplotypeScore=66.6012;InbreedingCoeff=0.9983;MQ=66.16;MQ0=0;MQRankSum=-3.347;QD=23.56;ReadPosRankSum=4.820;VQSLOD=4.7682;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:92.50:0,92,1165	0/0:11,0:11:33.11:0,33,415	0/0:21,0:21:48.15:0,48,603	0/0:14,0:12:30:0,30,323	0/0:20,0:20:60.19:0,60,751	1/1:2,24:26:66.15:672,66,0	1/1:2,20:22:48.11:489,48,0	0/0:33,0:33:87.28:0,87,1094	1/1:1,37:38:84.65:992,85,0	0/0:29,0:28:78.25:0,78,981	0/0:19,0:19:54.05:0,54,625	1/1:2,18:20:48.10:490,48,0	1/1:2,28:30:75.17:764,75,0	1/1:1,15:16:33.07:336,33,0	0/0:12,0:12:30.10:0,30,377	0/0:24,0:24:66.21:0,66,830	0/0:16,0:16:39.11:0,39,479	0/0:16,0:16:45.14:0,45,564	0/0:16,0:16:42.13:0,42,518	0/0:21,0:21:60.16:0,60,708	0/0:19,0:19:51.16:0,51,641	1/1:2,22:24:51.11:520,51,0	1/1:3,23:26:51.09:520,51,0	1/1:5,22:27:60.13:611,60,0	0/0:10,0:10:27.09:0,27,340	0/0:23,0:23:63.20:0,63,793	0/0:25,0:25:72.23:0,72,906	0/0:6,0:6:18.06:0,18,226
chr10	41858837	.	AT	A	5567.10	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-1.980;DP=608;FS=1.985;HRun=3;HaplotypeScore=77.4527;InbreedingCoeff=0.9996;MQ=69.62;MQ0=0;MQRankSum=1.876;QD=33.34;ReadPosRankSum=-1.508;VQSLOD=4.6652;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:72.24:0,72,1036	0/0:13,0:13:39.08:0,39,519	0/0:17,0:17:42.12:0,42,571	0/0:22,0:22:56.45:0,56,618	0/0:33,0:33:99:0,99,1425	0/0:25,0:25:75.25:0,75,1080	0/0:14,0:14:42.14:0,42,605	1/1:1,32:33:96.30:1190,96,0	0/0:28,0:28:75.23:0,75,1045	0/0:26,0:26:75.25:0,75,1079	0/0:21,0:21:63.20:0,63,889	0/0:23,0:23:69.16:0,69,968	0/0:15,0:15:45.13:0,45,628	0/0:21,0:21:60.19:0,60,845	0/0:16,0:16:48.15:0,48,674	0/0:19,0:19:54.16:0,54,743	0/0:18,0:18:54.16:0,54,744	0/0:13,0:13:36.12:0,36,518	1/1:1,18:19:57.14:687,57,0	1/1:0,20:20:54.17:669,54,0	1/1:0,22:22:60.19:744,60,0	0/0:24,0:24:72.24:0,72,1024	0/0:26,0:26:69.19:0,69,969	0/0:22,0:22:63.20:0,63,889	0/0:20,0:20:60.20:0,60,863	1/1:1,28:29:84.22:1013,84,0	1/1:0,32:32:78.25:967,78,0	1/1:1,11:12:24.08:297,24,0
chr10	41859238	.	G	GAAGCTAAAT	12481.49	PASS	AB=1.000;AC=20;AF=0.357;AN=56;BaseQRankSum=-6.087;DP=645;FS=5.893;HRun=0;HaplotypeScore=160.9747;InbreedingCoeff=0.8502;MQ=79.23;MQ0=0;MQRankSum=-14.779;QD=58.87;ReadPosRankSum=-0.540;VQSLOD=4.2355;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,102,2800	0/0:15,0:15:42.14:0,42,1244	0/0:27,0:27:72.19:0,72,1942	0/0:28,0:28:59.71:0,60,1292	0/0:32,0:32:96.30:0,96,2733	1/1:2,7:15:24.08:1029,24,0	1/1:6,6:13:30.10:1360,30,0	0/0:27,0:27:75.24:0,75,2097	1/1:4,9:19:21.07:968,21,0	0/0:26,0:26:72.21:0,72,1845	0/0:18,0:18:51.16:0,51,1384	1/1:4,9:16:27.04:1210,27,0	1/1:3,14:22:27.09:1220,27,0	1/1:3,18:26:48.16:2270,48,0	0/1:23,0:23:19.15:19,0,1612	0/0:37,0:37:99:0,102,2966	0/1:16,0:16:8.70:9,0,1192	0/0:21,0:21:27.37:0,27,1720	0/0:17,0:17:51.17:0,51,1407	0/0:28,0:28:78.22:0,78,2099	0/0:27,0:27:78.15:0,78,2130	1/1:4,12:22:39.05:1613,39,0	1/1:3,13:23:45.15:2058,45,0	1/1:2,9:16:15.05:725,15,0	0/0:27,0:27:81.26:0,81,2388	0/0:26,0:26:75.24:0,75,2168	0/0:28,0:28:84.26:0,84,2410	0/0:15,0:15:35.92:0,36,1102
chr10	41860193	.	TG	T	9531.36	PASS	AB=1.000;AC=43;AF=0.768;AN=56;BaseQRankSum=9.019;DP=540;FS=0.000;HRun=8;HaplotypeScore=82.7837;InbreedingCoeff=0.9222;MQ=72.12;MQ0=1;MQRankSum=-1.745;QD=23.25;ReadPosRankSum=1.913;VQSLOD=5.3806;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,102,1163	0/0:5,0:5:12.02:0,12,134	0/1:20,0:19:2.54:3,0,317	0/0:21,0:21:15.80:0,16,404	0/0:16,0:15:42.11:0,42,484	1/1:1,20:21:54.09:522,54,0	1/1:5,18:24:53.12:499,53,0	1/1:6,17:23:36.02:347,36,0	1/1:2,16:18:45.07:435,45,0	1/1:3,13:16:39.06:376,39,0	1/1:2,14:16:39.06:377,39,0	1/1:0,13:13:39.06:377,39,0	1/1:3,16:19:45.07:435,45,0	1/1:0,20:20:57.09:550,57,0	1/1:2,18:20:51.08:493,51,0	0/0:22,0:22:60.18:0,60,725	0/0:29,0:29:84.26:0,84,1015	1/1:2,17:19:48.08:463,48,0	1/1:2,18:19:54.09:521,54,0	1/1:3,16:19:54.07:515,54,0	1/1:4,30:34:90.14:869,90,0	1/1:1,10:11:27.04:261,27,0	1/1:1,10:11:30.05:290,30,0	1/1:3,17:20:54.08:521,54,0	1/1:1,22:23:60.10:579,60,0	1/1:3,16:19:48.08:463,48,0	1/1:2,18:20:54.08:521,54,0	1/1:0,4:4:12.02:116,12,0
chr10	41860287	.	TA	T	3194.29	PASS	AB=0.535;AC=13;AF=0.232;AN=56;BaseQRankSum=-0.475;DP=551;FS=10.255;HRun=8;HaplotypeScore=106.4741;InbreedingCoeff=0.9187;MQ=76.54;MQ0=1;MQRankSum=-2.420;QD=22.50;ReadPosRankSum=-0.964;VQSLOD=2.5598;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:75.18:0,75,878	0/0:15,0:15:45.13:0,45,531	0/0:13,0:11:24.07:0,24,285	0/0:31,0:28:62.47:0,62,685	0/0:30,0:30:84.26:0,84,1013	0/0:18,0:18:47.58:0,48,334	0/0:14,0:14:32.55:0,33,213	1/1:4,17:21:47.99:445,48,0	0/0:14,0:13:35.60:0,36,240	0/0:25,0:25:60.18:0,60,725	0/0:25,0:25:69.21:0,69,832	0/0:14,0:14:38.67:0,39,281	0/0:14,0:14:35.66:0,36,262	0/0:21,0:21:62.30:0,62,423	0/0:20,0:20:54.17:0,54,650	0/0:17,0:17:48.14:0,48,572	0/0:22,0:22:48.46:0,48,644	0/0:10,0:10:30.09:0,30,362	1/1:6,14:20:42.06:405,42,0	1/1:2,22:24:63.09:608,63,0	1/1:2,15:17:45.07:435,45,0	0/0:15,0:15:44.61:0,45,318	0/0:17,0:17:47.62:0,48,350	0/0:20,0:20:44.44:0,44,298	0/0:28,0:28:81.23:0,81,958	0/1:3,20:23:6.38:513,0,6	1/1:4,16:20:54.07:516,54,0	1/1:0,17:17:48.08:463,48,0
chr10	41860304	.	C	CA	4785.39	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-1.245;DP=566;FS=0.368;HRun=6;HaplotypeScore=95.3763;InbreedingCoeff=0.9992;MQ=68.84;MQ0=1;MQRankSum=-1.928;QD=30.10;ReadPosRankSum=1.487;VQSLOD=5.0018;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:72.16:0,72,733	0/0:15,0:15:41.83:0,42,410	0/0:18,0:16:27.45:0,27,335	0/0:19,0:16:24.17:0,24,301	0/0:28,0:28:78.18:0,78,796	1/1:0,25:25:69.22:867,69,0	1/1:1,14:15:33.11:415,33,0	0/0:21,0:21:51.11:0,51,520	1/1:1,18:18:39.12:490,39,0	0/0:23,0:23:66.15:0,66,673	0/0:25,0:25:72.08:0,72,713	1/1:4,12:16:30.10:377,30,0	1/1:0,10:10:30.10:377,30,0	1/1:3,19:22:51.16:641,51,0	0/0:21,0:21:60.13:0,60,612	0/0:18,0:18:54.12:0,54,550	0/0:21,0:21:34.17:0,34,527	0/0:13,0:13:33.08:0,33,337	0/0:21,0:21:63.13:0,63,636	0/0:29,0:29:78.17:0,78,795	0/0:16,0:16:42.09:0,42,428	1/1:2,15:17:45.14:564,45,0	1/1:1,18:19:51.16:640,51,0	1/1:3,13:16:33.11:415,33,0	0/0:30,0:30:81.17:0,81,821	0/0:23,0:23:57.12:0,57,577	0/0:22,0:22:66.12:0,66,664	0/0:17,0:17:48.11:0,48,490
chr10	41862645	.	A	AAAAAACCCAAAAAG	12321.61	PASS	AB=0.548;AC=27;AF=0.482;AN=56;BaseQRankSum=1.813;DP=596;FS=5.174;HRun=0;HaplotypeScore=178.7575;InbreedingCoeff=0.8878;MQ=72.18;MQ0=1;MQRankSum=-9.473;QD=46.32;ReadPosRankSum=1.371;VQSLOD=4.1871;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:39.28:0,39,2013	0/0:15,0:15:39.07:0,39,1251	0/0:36,0:27:28.26:0,28,1270	0/0:18,0:13:29.06:0,29,604	0/0:34,0:34:99:0,102,3413	1/1:1,14:27:24.08:1619,24,0	1/1:4,4:17:12.04:771,12,0	0/0:35,0:35:93.26:0,93,2883	1/1:1,10:15:15.05:1036,15,0	1/1:27,0:27:71.83:1353,72,0	1/1:2,0:27:14.57:1266,15,0	1/1:0,5:17:12.04:788,12,0	1/1:2,13:28:23.73:1386,24,0	0/1:3,6:17:9.78:201,0,10	1/1:18,0:18:48.12:1057,48,0	0/0:20,0:20:60.16:0,60,1983	0/0:12,0:12:36.12:0,36,1440	1/1:6,0:5:8.97:117,9,0	0/0:21,0:21:63.20:0,63,2031	0/0:34,0:33:96.25:0,96,3377	0/0:15,0:15:45.13:0,45,1640	1/1:1,10:19:26.98:1105,27,0	1/1:1,6:17:7.41:390,7,0	1/1:0,5:11:12.04:828,12,0	1/1:0,0:19:9.03:403,9,0	0/0:29,0:29:84.15:0,84,2558	0/0:32,0:32:93.29:0,93,3012	0/0:5,0:5:15.05:0,15,599
chr10	41862794	.	CA	C	2659	PASS	AB=0.707;AC=39;AF=0.696;AN=56;BaseQRankSum=-0.930;DP=491;FS=2.506;HRun=13;HaplotypeScore=86.0726;InbreedingCoeff=0.4408;MQ=72.85;MQ0=0;MQRankSum=2.991;QD=6.10;ReadPosRankSum=4.352;VQSLOD=2.7925;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:13.35:0,13,60	0/0:7,0:7:18:0,18,165	0/1:22,0:14:10.17:10,0,88	0/1:19,0:16:5.38:5,0,66	0/0:14,0:15:27.85:0,28,139	1/1:2,16:19:23.44:270,23,0	0/1:4,11:15:2.30:148,0,2	1/1:12,1:35:44.57:142,45,0	0/1:3,10:14:5.32:129,0,5	1/1:4,0:24:40.51:117,41,0	1/1:3,0:28:44.79:131,45,0	0/1:8,11:19:51.74:161,0,52	1/1:5,13:18:29.72:215,30,0	1/1:4,13:17:7.38:156,7,0	1/1:2,0:13:18.33:54,18,0	0/0:15,0:15:41.14:0,41,208	0/0:4,0:4:6.01:0,6,58	1/1:0,0:4:8.15:24,8,0	0/1:6,0:19:6.03:36,0,6	1/1:1,0:19:32.57:94,33,0	1/1:3,0:17:24.43:71,24,0	0/1:6,15:21:35.44:237,0,35	1/1:3,14:19:42.83:296,43,0	1/1:2,13:16:14.63:261,15,0	1/1:3,0:16:22.40:66,22,0	1/1:3,0:21:33.46:97,33,0	1/1:5,0:22:25.30:81,25,0	1/1:10,0:17:14.22:41,14,0
chr10	41862800	.	A	AAAAAAAAC	3553.27	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=-3.503;DP=514;FS=0.000;HRun=0;HaplotypeScore=158.7096;InbreedingCoeff=0.8385;MQ=69.05;MQ0=0;MQRankSum=-5.776;QD=40.84;ReadPosRankSum=-1.186;VQSLOD=3.2458;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,1:19:21.03:717,21,0	0/0:6,0:6:15.05:0,15,362	0/0:20,0:12:21.75:0,22,257	0/1:18,0:15:11.53:12,0,270	1/1:8,5:23:35.91:894,36,0	0/0:20,0:20:57.08:0,57,924	0/0:16,0:16:33.06:0,33,580	0/0:36,0:36:84.23:0,84,1369	0/0:15,0:15:38.96:0,39,578	0/0:25,0:25:60.58:0,61,1009	0/0:28,0:28:72.19:0,72,1269	0/0:18,0:18:42.09:0,42,784	0/0:19,0:19:33.89:0,34,558	0/0:19,0:19:36:0,36,550	0/0:11,0:11:30.06:0,30,530	1/1:4,12:22:48.60:1806,49,0	1/1:4,0:4:6.49:125,6,0	0/0:5,0:5:15.03:0,15,250	0/0:23,0:23:53.67:0,54,760	0/0:19,0:19:54.14:0,54,959	0/0:19,0:19:45.10:0,45,763	0/0:21,0:21:60.12:0,60,1020	0/0:22,0:22:54.12:0,54,938	0/0:17,0:17:51.11:0,51,924	0/0:16,0:16:33.11:0,33,622	0/0:20,0:19:54.17:0,54,973	0/0:23,0:22:39.38:0,39,664	0/0:8,0:8:24.07:0,24,428
chr10	41863034	.	TTGCTAAAC	T	6916.85	PASS	AC=40;AF=0.741;AN=54;BaseQRankSum=4.932;DP=333;FS=58.154;HRun=0;HaplotypeScore=96.3823;InbreedingCoeff=0.8147;MQ=94.26;MQ0=1;MQRankSum=-9.170;QD=33.91;ReadPosRankSum=3.804;VQSLOD=1.9783;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:33.11:0,33,1242	0/0:4,0:4:9.03:0,9,258	0/0:28,0:21:55.43:0,55,1521	0/0:27,0:22:50.30:0,50,1126	0/0:20,0:20:54.19:0,54,1945	1/1:10,0:10:6.02:147,6,0	1/1:6,0:6:15.05:390,15,0	1/1:17,0:17:21.04:331,21,0	1/1:16,0:16:18.06:466,18,0	1/1:10,2:12:30.10:732,30,0	1/1:6,4:10:12.04:312,12,0	1/1:8,0:8:18.06:467,18,0	1/1:9,0:9:12.04:310,12,0	1/1:15,0:15:27.09:701,27,0	1/1:9,4:13:30.10:778,30,0	0/0:15,0:15:39.13:0,39,1371	0/0:14,0:14:42.14:0,42,1360	1/1:5,0:5:6.02:159,6,0	1/1:15,0:15:18.06:393,18,0	./.	1/1:5,0:5:3.01:45,3,0	1/1:6,1:7:9.03:225,9,0	1/1:12,0:12:3.01:78,3,0	1/1:8,0:8:3.01:78,3,0	1/1:5,3:8:15.05:396,15,0	1/1:9,2:10:21.07:428,21,0	1/1:15,0:15:21.07:373,21,0	1/1:2,0:2:6.02:109,6,0
chr10	41863042	.	CTGCT	C	5178.95	PASS	AB=0.567;AC=35;AF=0.648;AN=54;BaseQRankSum=8.806;DP=279;FS=38.038;HRun=0;HaplotypeScore=66.8847;InbreedingCoeff=0.5459;MQ=95.77;MQ0=3;MQRankSum=-8.458;QD=33.85;ReadPosRankSum=4.115;VQSLOD=2.9568;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:36.12:0,36,1001	0/0:4,0:4:9.03:0,9,244	0/0:32,0:20:53.53:0,54,1414	0/0:24,0:19:51.74:0,52,1067	0/0:19,0:19:54.19:0,54,1547	1/1:3,0:8:6.02:97,6,0	1/1:0,5:5:15.05:290,15,0	1/1:0,7:7:21.04:346,21,0	0/1:1,11:12:4.92:324,0,5	1/1:2,8:10:30.09:506,30,0	1/1:4,0:4:12.04:170,12,0	1/1:0,8:8:18.06:347,18,0	1/1:1,4:5:12.04:229,12,0	1/1:0,11:11:27.09:523,27,0	1/1:6,6:12:30.09:457,30,0	0/0:16,0:16:45.15:0,45,1294	0/0:15,0:15:41.87:0,42,1161	0/1:1,2:3:16.91:105,0,17	0/1:1,8:9:3.74:356,0,4	./.	1/1:2,0:2:3.01:63,3,0	1/1:3,1:4:9.03:174,9,0	1/1:1,0:10:3.01:58,3,0	1/1:0,5:5:3.01:58,3,0	1/1:5,0:5:15.05:221,15,0	0/1:4,10:13:1.54:352,0,2	1/1:0,13:13:21.07:402,21,0	0/1:2,4:6:18.27:102,0,18
chr10	41863062	.	AAAAAAAAAAG	A	1626.63	PASS	AB=0.968;AC=10;AF=0.179;AN=56;BaseQRankSum=1.394;DP=458;FS=15.723;HRun=0;HaplotypeScore=154.6252;InbreedingCoeff=0.7296;MQ=62.21;MQ0=7;MQRankSum=-0.840;QD=17.88;ReadPosRankSum=-0.050;VQSLOD=2.0489;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:64.09:0,64,2205	0/0:9,0:9:24.08:0,24,927	0/0:31,0:10:24.02:0,24,493	0/0:26,0:15:20.59:0,21,270	0/0:20,0:20:57.11:0,57,1867	0/0:15,0:15:33.07:0,33,1015	0/0:11,0:11:23.28:0,23,243	0/0:22,0:22:58.53:0,59,1672	0/0:17,0:17:37.97:0,38,915	1/1:8,2:10:20.35:316,20,0	1/1:0,20:20:37.06:429,37,0	0/0:18,0:17:39.06:0,39,883	0/0:14,0:13:23.19:0,23,627	0/0:20,0:20:45.13:0,45,692	1/1:14,2:16:37.29:589,37,0	0/0:16,0:16:45.15:0,45,1546	0/0:16,0:16:42.04:0,42,1025	0/1:7,0:7:16.63:17,0,20	0/0:18,0:18:51.11:0,51,1851	0/0:19,0:19:53.55:0,54,1913	0/0:5,0:5:15.05:0,15,573	0/0:12,0:11:22.21:0,22,605	0/0:13,0:13:19.31:0,19,653	0/0:6,0:6:6.02:0,6,117	1/1:7,2:9:23.86:364,24,0	0/1:27,2:29:80.20:80,0,2457	0/0:27,0:26:63.04:0,63,1458	0/0:10,0:10:21.07:0,21,778
chr10	41863069	.	A	AG	1009.20	PASS	AB=0.884;AC=15;AF=0.268;AN=56;BaseQRankSum=-3.015;DP=446;FS=33.667;HRun=0;HaplotypeScore=80.7060;InbreedingCoeff=0.7246;MQ=62.05;MQ0=6;MQRankSum=3.251;QD=9.70;ReadPosRankSum=2.848;VQSLOD=1.7194;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:59.94:0,60,356	0/0:10,0:10:21.90:0,22,148	0/0:24,0:7:17.93:0,18,158	0/0:21,0:12:10.58:0,11,104	0/0:19,0:19:46.98:0,47,314	1/1:17,0:17:24.89:259,25,0	0/1:5,1:7:0.81:48,0,1	0/0:32,0:32:65.29:0,65,456	1/1:10,1:11:26.88:220,27,0	0/0:12,0:12:32.47:0,32,216	0/0:20,0:20:34.18:0,34,194	0/1:12,2:13:3.30:106,0,3	1/1:11,1:11:3.99:123,4,0	1/1:10,1:11:16.20:141,16,0	0/0:15,0:15:41.82:0,42,245	0/0:16,0:16:38.53:0,39,253	0/0:13,0:13:29.22:0,29,196	0/0:7,0:7:18.71:0,19,124	0/0:23,0:23:61.77:0,62,431	0/0:22,0:22:55.57:0,56,384	0/0:4,0:4:11.89:0,12,88	1/1:3,10:12:0.96:85,1,0	1/1:13,1:14:23.91:195,24,0	0/1:5,0:5:10.91:11,0,11	0/0:11,0:11:28.02:0,28,182	0/0:31,0:31:70.24:0,70,386	0/0:27,0:26:55.57:0,56,336	0/0:11,0:11:18.07:0,18,108
chr10	41863711	.	C	CATCT	1061.88	PASS	AB=0.866;AC=10;AF=0.227;AN=44;BaseQRankSum=-5.578;DP=620;FS=2.145;HRun=0;HaplotypeScore=104.3211;InbreedingCoeff=-0.0679;MQ=36.90;MQ0=162;MQRankSum=2.312;QD=4.76;ReadPosRankSum=1.582;VQSLOD=2.2658;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:14,0:11:0:0,0,0	0/0:8,0:6:18.06:0,18,268	./.	./.	0/0:18,0:9:3.01:0,3,46	0/0:19,0:14:9.03:0,9,137	0/0:16,0:11:15.05:0,15,231	./.	0/0:27,0:22:17.99:0,18,274	0/1:17,0:7:33.93:63,0,34	./.	0/0:24,0:19:2.63:0,3,46	0/0:20,0:17:5.89:0,6,61	0/0:26,0:23:3.01:0,3,46	0/1:26,0:22:33.94:43,0,34	./.	1/1:11,7:17:21.07:487,21,0	0/0:3,0:6:6.01:0,6,56	0/1:20,1:13:33.94:64,0,34	0/1:17,8:19:46.72:56,0,47	0/1:12,6:16:54.43:61,0,54	0/0:12,0:8:6.02:0,6,92	0/0:24,0:17:17.98:0,18,234	0/0:22,0:17:8.92:0,9,138	./.	0/1:31,8:27:99:357,0,559	0/0:30,0:24:15.05:0,15,228	0/1:15,1:9:58.16:58,0,127
chr10	41863757	.	T	TACAGAC	1024.19	PASS	AB=0.756;AC=18;AF=0.391;AN=46;BaseQRankSum=-1.529;DP=457;FS=10.323;HRun=0;HaplotypeScore=89.0386;InbreedingCoeff=0.6187;MQ=41.06;MQ0=57;MQRankSum=-1.114;QD=6.32;ReadPosRankSum=0.874;VQSLOD=1.1552;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:18:24.01:0,24,419	0/0:13,0:11:29.89:0,30,457	0/0:33,0:3:9:0,9,112	0/0:37,0:5:5.69:0,6,53	0/0:19,0:15:15.03:0,15,207	./.	1/1:11,0:10:6.02:74,6,0	1/1:15,0:6:9.03:196,9,0	0/0:17,0:14:9.03:0,9,161	./.	./.	./.	0/0:2,6:7:3.01:0,3,51	0/1:4,11:14:0:0,0,0	0/0:9,0:4:3.01:0,3,38	0/0:20,0:19:39.13:0,39,830	0/0:24,0:21:45.09:0,45,714	0/0:5,0:5:5.96:0,6,96	1/1:7,0:4:5.99:83,6,0	1/1:13,0:13:15.05:262,15,0	1/1:23,1:16:8.98:190,9,0	1/1:9,1:5:6:64,6,0	1/1:12,0:10:9.03:156,9,0	1/1:21,5:15:3.01:66,3,0	./.	0/1:27,2:20:93.15:93,0,377	0/0:16,13:21:8.98:0,9,122	0/0:4,0:4:9.03:0,9,163
chr10	41863767	.	GAC	G	613.09	PASS	AB=0.857;AC=17;AF=0.370;AN=46;BaseQRankSum=0.683;DP=400;FS=10.243;HRun=0;HaplotypeScore=61.1593;InbreedingCoeff=0.6245;MQ=40.34;MQ0=55;MQRankSum=-1.139;QD=5.07;ReadPosRankSum=-0.138;VQSLOD=1.3520;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:21:28.97:0,29,441	0/0:11,0:10:29.88:0,30,377	0/0:29,0:3:9:0,9,111	0/0:34,0:5:5.93:0,6,48	0/0:15,0:13:18.95:0,19,286	./.	1/1:10,0:8:6.02:74,6,0	1/1:7,3:6:9.03:121,9,0	0/0:10,6:13:9.03:0,9,111	./.	./.	./.	0/0:7,0:6:3.01:0,3,35	0/0:15,0:14:2.68:0,3,11	0/0:3,4:2:3:0,3,28	0/0:20,0:19:40.27:0,40,658	0/0:24,0:20:44.96:0,45,636	0/0:4,0:4:8.98:0,9,97	1/1:4,2:3:5.99:60,6,0	1/1:5,1:6:15:150,15,0	1/1:22,3:11:8.99:121,9,0	1/1:6,0:2:6:64,6,0	1/1:9,0:6:9.03:114,9,0	1/1:22,3:13:3.01:41,3,0	./.	0/1:20,4:14:30.59:31,0,312	0/0:21,0:13:8.97:0,9,91	0/0:3,0:3:9.03:0,9,128
chr10	41863862	.	C	CAG	65.57	PASS	AB=0.683;AC=16;AF=0.533;AN=30;BaseQRankSum=2.909;DP=188;FS=12.715;HRun=0;HaplotypeScore=23.9497;InbreedingCoeff=0.4785;MQ=43.36;MQ0=32;MQRankSum=-0.877;QD=1.21;ReadPosRankSum=-1.322;VQSLOD=-0.5065;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	0/0:11,0:9:11.05:0,11,163	0/0:30,0:14:41.77:0,42,437	0/0:23,0:11:5.94:0,6,196	./.	0/1:3,3:3:0:0,0,0	./.	./.	0/0:4,1:4:1.82:0,2,5	1/1:4,0:1:2.99:24,3,0	./.	1/1:6,0:3:2.97:20,3,0	1/1:7,0:2:0.89:2,1,0	0/0:6,3:5:5.67:0,6,34	./.	./.	1/1:4,0:3:5.89:37,6,0	./.	1/1:3,1:2:6:66,6,0	1/1:4,0:2:2.96:19,3,0	1/1:3,2:3:0.89:2,1,0	./.	0/0:6,0:4:3.01:0,3,33	0/1:8,6:9:0:0,0,0	./.	./.	./.	./.
chr10	41863876	.	GAC	G	45.01	PASS	AB=0.973;AC=15;AF=0.341;AN=44;BaseQRankSum=-1.420;DP=310;FS=2.816;HRun=0;HaplotypeScore=50.5229;InbreedingCoeff=0.1893;MQ=33.98;MQ0=43;MQRankSum=1.223;QD=0.34;ReadPosRankSum=2.296;VQSLOD=1.3872;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:5:6.02:0,6,66	0/1:16,0:14:17.20:17,0,151	./.	./.	./.	0/1:11,0:8:0:0,0,0	0/1:16,0:11:12.73:13,0,149	./.	1/1:7,0:5:5.49:34,5,0	0/0:10,0:6:15.03:0,15,150	./.	0/1:12,1:9:29.35:29,0,86	0/0:11,0:6:10.03:0,10,80	1/1:16,0:10:4.41:15,4,0	0/1:14,1:14:19.46:19,0,23	1/1:5,3:7:3.01:32,3,0	0/0:12,0:9:14.91:0,15,130	1/1:4,0:3:1.82:5,2,0	0/1:7,0:5:5.77:6,0,104	0/0:9,1:7:18.04:0,18,191	0/0:15,0:7:6.01:0,6,62	0/0:10,0:7:2.37:0,2,8	0/0:9,0:6:5.90:0,6,65	0/1:19,0:11:0:0,0,0	0/0:17,0:12:8.88:0,9,69	0/0:11,5:7:21.01:0,21,194	0/0:4,4:4:6.01:0,6,62	./.
chr10	41865172	.	G	GGATGC	23209.02	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=9.297;DP=492;FS=8.729;HRun=0;HaplotypeScore=180.1451;InbreedingCoeff=0.9454;MQ=75.33;MQ0=0;MQRankSum=-14.180;QD=63.24;ReadPosRankSum=0.882;VQSLOD=5.4926;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:30.10:0,30,568	0/0:6,0:6:18.06:0,18,365	0/0:22,0:21:42.14:0,42,845	0/0:19,0:20:48.58:0,49,844	0/0:22,0:22:60.18:0,60,1176	1/1:10,12:22:39.13:1157,39,0	1/1:9,7:16:36.12:977,36,0	1/1:15,10:25:57.07:1226,57,0	1/1:6,15:21:45.15:1367,45,0	1/1:10,16:26:54.19:1629,54,0	1/1:4,18:22:51.18:1487,51,0	1/1:5,13:18:42.14:1264,42,0	1/1:6,13:19:39.13:1176,39,0	1/1:7,13:20:45.14:1250,45,0	1/1:2,9:11:27.09:814,27,0	0/0:21,0:21:54.19:0,54,1097	0/0:21,0:21:60.21:0,60,1196	1/1:3,7:10:24.06:657,24,0	1/1:9,5:14:35.57:757,36,0	1/1:7,16:23:57.20:1675,57,0	1/1:6,9:15:30.10:903,30,0	1/1:5,1:6:6.02:180,6,0	1/1:4,12:16:36.12:1083,36,0	1/1:2,6:8:15.05:452,15,0	1/1:1,17:18:48.16:1450,48,0	1/1:10,20:30:72.24:2044,72,0	1/1:9,13:22:54.19:1571,54,0	1/1:4,1:5:3.01:91,3,0
chr10	41865191	.	GA	G	9403.15	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=14.082;DP=482;FS=4.292;HRun=7;HaplotypeScore=206.2499;InbreedingCoeff=0.9926;MQ=65.49;MQ0=0;MQRankSum=-14.602;QD=26.27;ReadPosRankSum=0.412;VQSLOD=2.1465;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:39.12:0,39,490	0/0:9,0:9:27.09:0,27,339	0/0:21,0:19:28.81:0,29,489	0/0:16,0:16:42.12:0,42,508	0/0:19,0:19:51.16:0,51,642	1/1:1,19:20:57.12:575,57,0	1/1:1,11:12:33.07:334,33,0	1/1:3,17:20:51.10:518,51,0	1/1:2,16:18:48.11:489,48,0	1/1:1,25:26:68.79:703,69,0	1/1:2,20:22:57.12:575,57,0	1/1:4,17:21:51.11:520,51,0	1/1:2,15:17:48.11:488,48,0	1/1:0,17:17:51.12:520,51,0	1/1:2,15:17:45.10:458,45,0	0/0:22,0:22:60.18:0,60,741	0/0:23,0:23:63.18:0,63,776	1/1:0,6:6:18.04:184,18,0	1/1:4,8:12:24.05:245,24,0	1/1:3,21:24:60.12:604,60,0	1/1:3,12:15:24.04:240,24,0	1/1:1,8:9:24.05:239,24,0	1/1:4,12:16:33.07:333,33,0	1/1:2,6:8:18.04:182,18,0	1/1:1,17:18:48.11:488,48,0	1/1:2,28:30:84.19:855,84,0	1/1:0,24:24:72.16:730,72,0	1/1:4,2:6:14.93:124,15,0
chr10	41865211	.	T	TAAC	21304.62	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=8.120;DP=529;FS=6.679;HRun=0;HaplotypeScore=179.1410;InbreedingCoeff=0.9865;MQ=56.12;MQ0=0;MQRankSum=-13.754;QD=50.97;ReadPosRankSum=0.498;VQSLOD=6.1281;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:39.13:0,39,614	0/0:9,0:9:24.08:0,24,385	0/0:14,0:13:35.84:0,36,519	0/0:13,0:13:33.09:0,33,491	0/0:20,0:20:54.12:0,54,765	1/1:2,20:23:56.93:1187,57,0	1/1:4,10:14:27.09:593,27,0	1/1:7,24:31:72.24:1576,72,0	1/1:1,18:19:45.15:975,45,0	1/1:6,25:31:60.18:1268,60,0	1/1:6,16:22:48.16:1025,48,0	1/1:4,16:20:45.15:987,45,0	1/1:6,10:16:36.12:777,36,0	1/1:1,19:22:54.19:1184,54,0	1/1:2,19:21:42.14:923,42,0	0/0:19,0:19:57.18:0,57,887	0/0:23,0:23:66.20:0,66,987	1/1:5,3:8:9.03:198,9,0	1/1:0,16:17:51.18:1121,51,0	1/1:2,21:23:63.22:1383,63,0	1/1:4,7:12:21.07:449,21,0	1/1:6,8:14:41.84:721,42,0	1/1:3,15:19:42.14:921,42,0	1/1:1,9:10:18.06:395,18,0	1/1:0,20:20:54.19:1174,54,0	1/1:1,32:37:99:2150,105,0	1/1:3,25:29:75.26:1638,75,0	1/1:0,10:10:30.10:661,30,0
chr10	41865670	.	T	TCA	15075.74	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=-8.562;DP=604;FS=9.331;HRun=0;HaplotypeScore=78.7914;InbreedingCoeff=0.9569;MQ=69.33;MQ0=3;MQRankSum=-3.917;QD=34.74;ReadPosRankSum=2.925;VQSLOD=6.7921;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:27:63.03:0,63,770	0/0:17,0:17:42.13:0,42,530	0/0:35,0:35:69.15:0,69,807	0/0:20,0:20:36.05:0,36,408	0/0:28,0:28:75.23:0,75,933	1/1:1,26:28:69.24:1147,69,0	1/1:5,10:15:21.07:349,21,0	1/1:4,10:14:36.12:586,36,0	1/1:3,21:24:48.16:798,48,0	1/1:5,33:38:96.27:1509,96,0	1/1:4,26:30:72.24:1163,72,0	1/1:4,19:24:45.15:746,45,0	1/1:5,16:22:39.13:647,39,0	1/1:6,12:18:30.10:497,30,0	1/1:4,20:24:54.18:898,54,0	0/0:25,0:25:66.18:0,66,807	0/0:18,0:18:51.14:0,51,628	1/1:3,10:13:30.10:498,30,0	1/1:4,10:14:33.09:499,33,0	1/1:3,16:19:40.95:629,41,0	1/1:1,6:7:9.03:150,9,0	1/1:5,25:30:69.24:1147,69,0	1/1:3,27:30:63.21:1033,63,0	1/1:5,23:26:48.13:798,48,0	1/1:2,28:30:69.24:1147,69,0	1/1:6,6:12:22.28:323,22,0	1/1:4,8:12:32.14:464,32,0	1/1:0,1:1:3.01:50,3,0
chr10	41865888	.	CT	C	9621.61	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=11.885;DP=614;FS=0.304;HRun=2;HaplotypeScore=62.9984;InbreedingCoeff=0.9989;MQ=82.47;MQ0=1;MQRankSum=-0.941;QD=34.99;ReadPosRankSum=4.686;VQSLOD=5.0735;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,14:15:36.12:467,36,0	0/0:8,0:8:24.08:0,24,359	0/0:29,0:26:69.21:0,69,998	0/0:36,0:29:83.84:0,84,1168	1/1:0,34:34:99:1285,99,0	1/1:1,20:21:60.19:779,60,0	1/1:0,19:19:54.18:701,54,0	0/0:28,0:28:84.28:0,84,1259	1/1:0,20:20:57.19:740,57,0	0/0:27,0:27:81.27:0,81,1191	0/0:29,0:29:84.28:0,84,1238	1/1:0,22:22:60.20:779,60,0	1/1:0,16:16:48.16:623,48,0	1/1:0,23:23:57.19:740,57,0	0/0:35,0:35:99:0,102,1508	1/1:0,16:16:48.16:623,48,0	1/1:1,16:17:39.13:506,39,0	0/0:9,0:9:24.08:0,24,358	0/0:17,0:17:51.17:0,51,764	0/0:25,0:25:72.24:0,72,1078	0/0:18,0:18:54.18:0,54,807	1/1:0,24:24:66.21:857,66,0	1/1:0,26:26:60.20:779,60,0	1/1:0,22:22:57.19:740,57,0	0/0:16,0:16:48.16:0,48,719	0/0:19,0:19:57.19:0,57,854	0/0:35,0:35:99:0,105,1545	0/0:8,0:8:21.07:0,21,315
chr10	41866190	.	AG	A	6400.13	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=14.371;DP=731;FS=0.000;HRun=2;HaplotypeScore=69.2366;InbreedingCoeff=0.9990;MQ=85.05;MQ0=0;MQRankSum=-3.228;QD=34.41;ReadPosRankSum=-1.726;VQSLOD=4.3960;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:63.18:0,63,919	0/0:9,0:9:27.09:0,27,405	0/0:26,0:26:72.23:0,72,1059	0/0:22,0:22:57.46:0,57,727	0/0:39,0:39:99:0,117,1728	0/0:24,0:24:72.22:0,72,1039	0/0:19,0:19:57.15:0,57,793	1/1:2,30:32:90.25:1114,90,0	0/0:39,0:39:99:0,117,1710	0/0:37,0:37:99:0,111,1624	0/0:30,0:30:87.26:0,87,1244	0/0:25,0:25:75.24:0,75,1099	0/0:34,0:34:99:0,102,1488	0/0:30,0:30:90.30:0,90,1346	0/0:23,0:23:69.22:0,69,1013	0/0:36,0:36:99:0,108,1598	0/0:17,0:17:51.16:0,51,742	0/0:19,0:19:48.09:0,48,669	1/1:1,23:24:69.15:833,69,0	1/1:0,41:41:99:1341,105,0	1/1:0,15:15:45.15:584,45,0	0/0:21,0:21:63.21:0,63,944	0/0:28,0:28:84.28:0,84,1256	0/0:19,0:19:57.19:0,57,853	0/0:27,0:27:81.27:0,81,1210	1/1:2,25:27:33.24:897,33,0	1/1:0,39:39:99:1359,105,0	1/1:0,8:8:21.07:272,21,0
chr10	41867780	.	T	TAA	15461.24	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=18.638;DP=596;FS=2.990;HRun=1;HaplotypeScore=139.1346;InbreedingCoeff=0.9956;MQ=71.13;MQ0=0;MQRankSum=-7.673;QD=54.06;ReadPosRankSum=3.222;VQSLOD=4.9038;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,33:35:99:1898,102,0	0/0:13,0:13:39.13:0,39,636	0/0:10,0:10:30.08:0,30,445	0/0:11,0:11:33.05:0,33,469	1/1:1,21:22:65.80:1173,66,0	1/1:3,30:33:99:1898,99,0	1/1:2,14:16:48.13:807,48,0	0/0:35,0:35:99:0,99,1593	1/1:3,23:26:69.20:1325,69,0	0/0:27,0:27:72.25:0,72,1174	0/0:18,0:18:54.18:0,54,880	1/1:1,15:16:48.15:921,48,0	1/1:1,15:16:48.15:916,48,0	1/1:2,18:20:60.19:1093,60,0	0/0:24,0:24:66.23:0,66,1072	1/1:0,23:23:69.24:1358,69,0	1/1:2,20:22:60.19:1155,60,0	0/0:11,0:11:30.10:0,30,489	0/0:23,0:23:66.21:0,66,1041	0/0:35,0:35:99:0,105,1663	0/0:21,0:21:63.20:0,63,999	1/1:1,16:17:48.13:872,48,0	1/1:1,21:22:66.23:1258,66,0	1/1:0,17:16:39.13:787,39,0	0/0:16,0:16:45.15:0,45,734	0/0:29,0:29:81.24:0,81,1230	0/0:33,0:33:93.30:0,93,1486	0/0:4,0:4:12.04:0,12,195
chr10	41867783	.	GT	G	9547.15	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=19.864;DP=595;FS=3.009;HRun=2;HaplotypeScore=148.2693;InbreedingCoeff=0.9956;MQ=73.36;MQ0=0;MQRankSum=-8.179;QD=33.50;ReadPosRankSum=3.849;VQSLOD=4.4033;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,35:35:93.28:1137,93,0	0/0:14,0:14:42.12:0,42,605	0/0:12,0:12:36.08:0,36,497	0/0:12,0:12:29.61:0,30,449	1/1:0,21:23:66.17:773,66,0	1/1:3,30:33:96.27:1152,96,0	1/1:1,14:15:44.99:483,45,0	0/0:36,0:36:99:0,102,1449	1/1:0,25:26:71.03:863,71,0	0/0:27,0:27:75.25:0,75,1108	0/0:19,0:19:57.18:0,57,826	1/1:0,15:15:45.14:566,45,0	1/1:1,16:17:51.15:623,51,0	1/1:0,20:20:57.15:663,57,0	0/0:22,0:22:60.20:0,60,900	1/1:0,23:23:69.20:839,69,0	1/1:1,20:21:54.17:675,54,0	0/0:11,0:11:30.10:0,30,450	0/0:21,0:21:63.20:0,63,921	0/0:36,0:36:99:0,108,1597	0/0:19,0:19:57.19:0,57,843	1/1:0,17:17:49.02:554,49,0	1/1:1,21:22:63.17:733,63,0	1/1:0,17:16:39.11:486,39,0	0/0:17,0:17:48.16:0,48,718	0/0:27,0:27:75.25:0,75,1104	0/0:33,0:33:99:0,99,1480	0/0:4,0:4:12.04:0,12,180
chr10	41869371	.	CA	C	10849.51	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=16.777;DP=718;FS=2.333;HRun=1;HaplotypeScore=82.1775;InbreedingCoeff=0.9896;MQ=85.51;MQ0=0;MQRankSum=-3.654;QD=39.03;ReadPosRankSum=0.152;VQSLOD=5.2907;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:58:99:0,172,2733	0/0:12,0:12:36.12:0,36,576	0/0:22,0:22:66.22:0,66,1045	0/0:35,0:35:99:0,105,1664	0/0:23,0:23:69.24:0,69,1101	0/0:24,0:24:69.22:0,69,1079	0/0:25,0:25:75.26:0,75,1197	1/1:0,34:34:96.30:1321,96,0	0/0:26,0:26:78.27:0,78,1235	1/1:0,26:26:78.24:1069,78,0	1/1:1,20:21:57.18:782,57,0	0/0:31,0:31:93.32:0,93,1485	0/0:31,0:31:93.32:0,93,1486	0/0:37,0:37:99:0,111,1767	1/1:0,35:35:99:1469,105,0	0/0:30,0:30:90.31:0,90,1439	0/0:26,0:26:78.25:0,78,1217	1/1:0,5:5:15.05:210,15,0	1/1:0,20:20:60.18:819,60,0	1/1:0,22:22:60.20:839,60,0	1/1:0,31:31:75.25:1049,75,0	0/0:20,0:20:60.19:0,60,935	0/0:16,0:16:44.99:0,45,673	0/0:24,0:24:72.20:0,72,1120	1/1:0,17:17:39.13:546,39,0	1/1:0,30:30:90.30:1254,90,0	1/1:0,34:34:99:1367,99,0	1/1:0,3:3:9.03:126,9,0
chr10	41870039	.	T	TG	4719.68	PASS	AB=0.578;AC=28;AF=0.500;AN=56;BaseQRankSum=5.347;DP=646;FS=15.195;HRun=9;HaplotypeScore=125.4650;InbreedingCoeff=0.8513;MQ=86.60;MQ0=0;MQRankSum=-2.408;QD=14.84;ReadPosRankSum=-1.686;VQSLOD=3.2362;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:71.98:0,72,623	0/0:16,0:16:44.99:0,45,391	0/0:33,0:32:48.68:0,49,367	0/0:19,0:20:29.52:0,30,242	0/0:34,0:35:80.01:0,80,683	1/1:7,11:18:33.07:356,33,0	0/1:8,18:26:1:428,0,1	0/0:28,0:28:43.91:0,44,365	1/1:4,14:18:9.99:325,10,0	1/1:10,12:22:30.02:307,30,0	1/1:18,1:27:11.53:76,12,0	1/1:3,18:21:36.09:398,36,0	1/1:3,16:19:30.05:313,30,0	1/1:4,16:20:45.59:499,46,0	1/1:8,20:29:69.14:743,69,0	0/0:23,0:23:62.96:0,63,542	0/1:5,17:22:10:356,0,10	1/1:5,0:8:5.68:28,6,0	0/0:14,0:14:26.94:0,27,234	0/0:31,0:32:58.97:0,59,496	0/0:35,1:36:53.78:0,54,694	1/1:14,9:23:30.05:311,30,0	1/1:6,7:13:12.03:133,12,0	1/1:13,16:29:16.06:405,16,0	1/1:11,1:23:8.52:43,9,0	0/0:23,0:23:50.98:0,51,443	0/0:22,1:23:14.78:0,15,357	0/0:16,0:16:35.97:0,36,309
chr10	41870632	.	GAGAGAGAGAGAGAGAGAGAGAA	G	2722.50	PASS	AB=0.964;AC=19;AF=0.352;AN=54;BaseQRankSum=2.357;DP=471;FS=6.150;HRun=0;HaplotypeScore=269.2588;InbreedingCoeff=0.4553;MQ=45.03;MQ0=16;MQRankSum=-5.525;QD=13.96;ReadPosRankSum=4.281;VQSLOD=0.9944;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:24:27.06:0,27,453	0/0:6,0:6:14.97:0,15,873	0/0:17,0:6:5.87:0,6,70	0/0:26,0:10:11.15:0,11,223	0/0:24,0:24:23.84:0,24,373	1/1:15,2:16:8.82:303,9,0	1/1:16,0:16:8.88:211,9,0	0/0:26,0:23:26.84:0,27,762	1/1:18,5:22:23.03:536,23,0	0/1:22,0:22:9.93:10,0,589	0/0:15,0:15:18.03:0,18,235	0/1:7,2:9:8.64:257,0,9	1/1:15,4:19:29.76:832,30,0	1/1:5,8:13:14.24:383,14,0	0/1:21,0:21:14.81:15,0,63	0/0:16,0:15:25.15:0,25,310	0/1:6,0:6:30.79:58,0,31	./.	0/0:12,0:12:5.84:0,6,341	0/0:26,0:26:38.34:0,38,596	0/1:12,0:10:10.97:11,0,49	1/1:14,3:17:8.76:165,9,0	0/0:12,2:14:0.28:0,0,1	1/1:17,3:19:2.35:120,2,0	0/0:25,0:25:7.17:0,7,223	0/0:20,0:20:19.41:0,19,814	0/0:14,0:14:11.38:0,11,202	0/0:3,0:2:3.01:0,3,54
chr10	41870640	.	GAGAGAGAGAGAGAA	G	4639.21	PASS	AB=0.947;AC=33;AF=0.611;AN=54;BaseQRankSum=-0.842;DP=452;FS=0.000;HRun=0;HaplotypeScore=207.8827;InbreedingCoeff=0.1633;MQ=35.27;MQ0=18;MQRankSum=-2.940;QD=11.93;ReadPosRankSum=3.213;VQSLOD=3.6825;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:23:49.47:59,0,49	0/0:6,0:6:14.97:0,15,599	0/1:15,0:3:1.79:2,0,40	0/0:23,0:7:12.79:0,13,97	0/0:19,0:19:8.20:0,8,53	1/1:16,0:15:5.36:131,5,0	0/1:14,0:14:4.70:54,0,5	1/1:23,0:21:47.87:328,48,0	0/1:20,0:19:2.03:158,0,2	1/1:19,4:23:55.22:908,55,0	1/1:11,2:13:11.43:93,11,0	0/1:9,0:9:20.90:60,0,21	1/1:22,0:22:10.68:358,11,0	1/1:14,0:14:10.85:130,11,0	1/1:0,20:20:6.02:251,6,0	0/1:14,0:13:47.10:126,0,47	0/0:6,0:6:11.71:0,12,101	./.	1/1:11,2:13:20.88:257,21,0	0/1:20,4:24:15.13:232,0,15	1/1:11,1:10:5.92:42,6,0	0/1:17,0:17:18.98:40,0,19	0/1:15,0:15:0.17:0,0,1	1/1:21,0:20:2.52:44,3,0	0/1:16,9:25:2.09:215,0,2	0/1:15,4:19:42.09:823,0,42	1/1:14,1:15:20.78:327,21,0	0/0:3,0:2:2.74:0,3,12
chr10	41870642	.	GAGAGAGAGAGAA	G	3001.34	PASS	AB=0.995;AC=34;AF=0.630;AN=54;BaseQRankSum=2.187;DP=450;FS=3.256;HRun=0;HaplotypeScore=201.6832;InbreedingCoeff=-0.1536;MQ=34.83;MQ0=20;MQRankSum=-4.526;QD=7.54;ReadPosRankSum=4.408;VQSLOD=2.6254;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:22,2:22:4.15:117,0,4	0/0:6,0:6:14.97:0,15,549	0/0:16,0:3:0.10:0,0,41	0/0:25,0:6:12.31:0,12,93	1/1:17,1:18:2.99:24,3,0	1/1:16,0:15:5.95:104,6,0	0/1:16,0:16:6.31:29,0,6	0/1:20,0:18:44.16:149,0,44	1/1:19,0:19:6.62:112,7,0	0/1:21,0:21:40.99:485,0,41	0/1:14,0:14:32.51:34,0,33	0/1:9,0:9:13.31:33,0,13	1/1:24,0:24:21.15:288,21,0	1/1:14,0:14:10.27:89,10,0	1/1:20,0:20:6.02:183,6,0	1/1:11,3:13:14.22:277,14,0	0/1:6,0:6:10.09:10,0,49	./.	1/1:12,0:12:23.84:242,24,0	0/1:22,0:22:71.53:73,0,72	0/1:12,0:10:3.25:11,0,3	0/1:17,0:17:16.99:26,0,17	0/1:15,0:15:0.13:0,0,0	1/1:21,0:20:2.60:31,3,0	0/1:27,0:27:18.32:98,0,18	0/1:20,0:20:65.38:567,0,65	0/1:14,0:14:21.01:150,0,21	1/1:2,0:2:2.97:20,3,0
chr10	41870652	.	GAA	G	1804.79	PASS	AB=1.000;AC=32;AF=0.615;AN=52;BaseQRankSum=-2.069;DP=431;FS=2.764;HRun=3;HaplotypeScore=158.8295;InbreedingCoeff=0.3671;MQ=33.63;MQ0=22;MQRankSum=-0.871;QD=5.69;ReadPosRankSum=0.358;VQSLOD=0.1262;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:18:6.83:38,7,0	0/0:7,0:7:3.08:0,3,120	0/0:17,0:4:11.98:0,12,98	0/0:31,0:11:17.06:0,17,173	0/1:17,0:17:0:0,0,0	0/0:14,0:13:0.52:0,1,11	1/1:12,0:12:3.72:21,4,0	1/1:20,0:19:50.60:366,51,0	0/1:21,0:21:1.96:43,0,2	1/1:14,3:17:38.78:321,39,0	1/1:8,1:9:5.99:49,6,0	0/1:10,0:10:13.66:23,0,14	0/1:20,0:20:25.57:77,0,26	0/1:15,0:15:6.04:6,0,32	1/1:20,0:20:5.97:45,6,0	1/1:12,0:11:5.83:41,6,0	0/0:5,0:6:3.29:0,3,21	./.	1/1:18,0:14:32.75:238,33,0	1/1:17,3:20:4.86:69,5,0	1/1:11,0:9:2.92:17,3,0	0/0:13,0:13:2.34:0,2,13	0/1:10,0:10:0.17:0,0,0	0/0:18,0:18:2.46:0,2,13	1/1:25,2:27:11.48:86,11,0	1/1:19,2:21:35.93:415,36,0	1/1:15,2:17:11.85:102,12,0	./.
chr10	41870694	.	C	CAG	41.63	PASS	AB=1.000;AC=8;AF=0.143;AN=56;BaseQRankSum=6.647;DP=604;FS=19.089;HRun=0;HaplotypeScore=264.5222;InbreedingCoeff=0.2875;MQ=54.17;MQ0=3;MQRankSum=-5.554;QD=0.39;ReadPosRankSum=-6.700;VQSLOD=0.0360;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:4.50:0,5,259	0/0:8,0:8:24.08:0,24,367	0/0:39,0:32:90.06:0,90,1224	0/0:64,0:44:84.70:0,85,1149	0/0:28,0:28:27.07:0,27,391	0/0:19,0:19:14.46:0,14,209	0/0:19,0:19:6.02:0,6,91	0/0:22,0:22:66.17:0,66,923	0/0:26,0:26:44.23:0,44,656	0/0:17,0:16:35.58:0,36,456	0/1:17,0:17:0.88:1,0,88	0/0:15,0:15:16.99:0,17,314	0/0:22,0:22:27.09:0,27,411	0/0:26,0:26:35.82:0,36,551	0/1:17,0:17:5.18:14,0,5	0/0:17,0:17:17.87:0,18,275	1/1:5,4:9:5.89:89,6,0	0/0:5,0:5:6.02:0,6,92	0/0:19,0:19:52.64:0,53,753	0/1:17,0:17:17.72:18,0,18	1/1:17,3:17:2.04:6,2,0	0/0:21,0:21:14.91:0,15,227	0/0:23,0:23:14.58:0,15,226	0/0:24,0:24:12.40:0,12,185	0/1:27,0:27:30.72:31,0,66	0/0:30,0:30:38.66:0,39,866	0/0:24,0:24:8.03:0,8,207	0/0:3,0:3:8.84:0,9,56
chr10	41870700	.	C	CAT	70.18	PASS	AB=0.983;AC=10;AF=0.179;AN=56;BaseQRankSum=5.365;DP=607;FS=17.615;HRun=0;HaplotypeScore=261.5245;InbreedingCoeff=0.3361;MQ=52.41;MQ0=3;MQRankSum=-5.060;QD=0.54;ReadPosRankSum=-7.966;VQSLOD=-0.3205;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:18.49:0,18,275	0/0:9,0:9:21.07:0,21,321	0/0:41,0:37:89.28:0,89,1299	0/0:64,0:44:90.56:0,91,1137	0/0:28,0:28:33.09:0,33,482	0/0:20,0:20:15.01:0,15,220	0/0:20,0:20:6:0,6,70	0/1:25,0:25:31.56:32,0,602	0/0:25,0:25:17.96:0,18,656	0/0:20,0:19:46.78:0,47,445	0/1:16,0:16:0.10:0,0,109	0/0:17,0:17:17.17:0,17,315	0/0:24,0:24:27.09:0,27,397	0/0:24,0:24:36:0,36,550	0/1:16,0:16:12.15:12,0,46	0/0:16,0:16:18.05:0,18,276	1/1:5,4:9:5.89:90,6,0	0/0:3,0:3:6.02:0,6,92	0/0:16,0:16:35.23:0,35,466	1/1:18,0:18:9.10:30,9,0	1/1:17,0:15:2.04:6,2,0	0/0:22,0:22:14.91:0,15,229	0/0:26,0:26:14.76:0,15,229	0/0:22,0:22:12.40:0,12,185	0/1:27,0:27:30.54:31,0,59	0/0:29,0:29:26.56:0,27,651	0/0:24,0:24:0.73:0,1,133	0/0:3,0:3:4.93:0,5,14
chr10	41870704	.	CAG	C	333.26	PASS	AB=0.920;AC=10;AF=0.179;AN=56;BaseQRankSum=3.043;DP=609;FS=1.353;HRun=0;HaplotypeScore=254.3698;InbreedingCoeff=0.0176;MQ=50.47;MQ0=3;MQRankSum=-5.773;QD=1.87;ReadPosRankSum=0.865;VQSLOD=2.3736;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:25:9:9,0,256	0/0:9,0:9:27.09:0,27,475	0/0:42,0:36:86.05:0,86,1363	0/0:63,0:47:93.85:0,94,1361	0/0:28,0:28:25.15:0,25,80	0/1:21,0:21:2.53:3,0,9	1/1:20,0:20:2.82:8,3,0	0/0:32,0:28:40.37:0,40,509	0/1:24,0:24:36.07:36,0,36	0/1:12,7:18:99:295,0,232	0/1:9,7:16:30.24:30,0,58	0/1:17,0:17:4.76:5,0,24	0/1:22,0:22:11.61:12,0,72	0/0:25,0:25:16.53:0,17,69	0/1:13,1:14:6.16:63,0,6	0/0:15,0:15:18.05:0,18,327	0/0:9,0:9:7.08:0,7,59	0/0:3,0:3:6.02:0,6,92	0/0:14,0:14:9.76:0,10,305	0/0:19,0:19:14.08:0,14,119	0/0:17,1:16:0:0,0,0	0/0:23,0:23:13.23:0,13,64	0/0:27,0:27:2.37:0,2,19	0/0:21,0:21:10.18:0,10,32	0/0:15,12:27:16.98:0,17,123	0/0:28,0:28:66.46:0,66,884	0/0:24,0:24:22.79:0,23,288	0/0:3,0:3:9.03:0,9,123
chr10	41870710	.	CAG	C	3558.17	PASS	AB=0.927;AC=24;AF=0.429;AN=56;BaseQRankSum=-0.002;DP=614;FS=0.986;HRun=0;HaplotypeScore=237.9750;InbreedingCoeff=0.5226;MQ=51.62;MQ0=5;MQRankSum=-0.211;QD=11.19;ReadPosRankSum=5.772;VQSLOD=2.7746;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,3:28:12.51:0,13,58	0/0:10,0:10:30.10:0,30,532	0/0:42,0:37:85.42:0,85,1478	0/0:62,0:49:99:0,103,1625	1/1:0,30:30:32.97:453,33,0	1/1:7,13:20:17.30:236,17,0	1/1:6,14:20:5.91:78,6,0	0/1:27,8:29:99:317,0,288	1/1:6,15:21:42.13:564,42,0	0/0:22,0:21:4.17:0,4,278	0/0:17,0:17:5.61:0,6,63	1/1:3,12:15:23.20:295,23,0	1/1:7,15:22:27.08:356,27,0	1/1:3,17:20:36.09:494,36,0	0/0:15,0:15:0.24:0,0,10	0/0:17,0:17:13.49:0,13,82	0/0:9,0:9:4.56:0,5,59	0/0:3,0:3:3.01:0,3,38	0/1:18,0:17:99:147,0,173	0/0:17,1:18:6.76:0,7,68	0/0:14,2:15:0:0,0,0	1/1:5,14:19:14.87:169,15,0	1/1:3,21:24:11.58:164,12,0	1/1:6,15:21:9.81:161,10,0	0/0:28,0:28:16.93:0,17,101	0/1:25,2:27:99:109,0,281	0/1:25,1:26:12.69:13,0,86	0/0:7,0:7:8.59:0,9,44
chr10	41870712	.	G	GAC	485	PASS	AB=0.963;AC=23;AF=0.411;AN=56;BaseQRankSum=7.493;DP=619;FS=8.060;HRun=0;HaplotypeScore=255.9397;InbreedingCoeff=0.2600;MQ=51.67;MQ0=5;MQRankSum=-4.498;QD=1.57;ReadPosRankSum=0.749;VQSLOD=1.1308;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:29:15.87:44,0,16	0/0:10,0:10:30.10:0,30,459	0/0:41,0:36:79.89:0,80,1334	0/0:63,0:50:82.75:0,83,1477	0/0:31,0:31:28.64:0,29,121	0/1:19,0:19:24.06:24,0,33	0/1:21,0:21:7.07:15,0,7	0/0:33,0:27:10.96:0,11,218	0/0:21,0:21:25.69:0,26,156	0/1:17,5:21:99:103,0,185	0/1:14,3:17:6.49:53,0,6	0/0:16,0:16:4.33:0,4,71	0/1:23,0:23:17.78:33,0,18	0/0:21,0:21:28.18:0,28,135	1/1:12,4:16:11.50:83,11,0	1/1:16,0:16:16.43:56,16,0	0/0:11,0:11:5.69:0,6,57	0/1:3,0:3:3.52:4,0,19	0/1:17,0:16:2.79:3,0,114	1/1:18,0:18:17.85:52,18,0	1/1:16,0:15:2.04:6,2,0	0/0:19,0:19:14.23:0,14,84	0/0:25,0:25:10.49:0,10,46	0/0:20,0:20:11.50:0,11,52	1/1:24,5:29:1.44:78,1,0	0/1:27,0:27:33.71:34,0,121	1/1:28,0:28:18.76:68,19,0	1/1:7,0:7:2.66:6,3,0
chr10	41870714	.	G	GACAGAC	6593.77	PASS	AB=0.881;AC=39;AF=0.696;AN=56;BaseQRankSum=7.120;DP=620;FS=25.877;HRun=0;HaplotypeScore=266.6533;InbreedingCoeff=0.3202;MQ=52.22;MQ0=3;MQRankSum=-3.521;QD=13.35;ReadPosRankSum=5.216;VQSLOD=2.6797;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:14,0:29:14.83:110,0,15	0/0:10,0:10:30.06:0,30,591	0/0:40,0:36:87:0,87,1604	0/0:57,0:49:94.40:0,94,1696	1/1:33,0:33:19.97:73,20,0	0/1:17,0:19:22.75:75,0,23	0/1:18,0:21:0.02:69,0,0	1/1:32,0:28:65.96:867,66,0	0/1:17,0:19:5.80:85,0,6	1/1:18,5:22:11:642,11,0	0/1:15,3:18:8.50:96,0,9	1/1:15,0:16:8.24:46,8,0	1/1:20,0:23:18.61:283,19,0	1/1:18,0:20:24.99:147,25,0	1/1:13,4:17:6.02:162,6,0	1/1:2,0:14:21.02:207,21,0	0/1:10,0:10:13.01:48,0,13	0/0:2,0:2:3:0,3,25	1/1:4,14:18:36.58:796,37,0	1/1:1,13:22:5.80:218,6,0	0/0:13,0:16:0.89:0,1,2	1/1:18,0:19:7.22:47,7,0	0/1:23,0:25:10.05:39,0,10	1/1:20,0:21:9.29:32,9,0	1/1:25,5:30:14.67:183,15,0	1/1:10,9:26:51.67:1534,52,0	1/1:3,21:28:18.04:506,18,0	1/1:0,7:7:9.03:328,9,0
chr10	41871451	.	GT	G	1330.47	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.353;DP=638;FS=4.717;HRun=9;HaplotypeScore=65.0925;InbreedingCoeff=0.9855;MQ=76.04;MQ0=0;MQRankSum=-4.875;QD=18.23;ReadPosRankSum=2.581;VQSLOD=3.9952;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,34:37:67.36:764,67,0	0/0:6,0:6:18.05:0,18,208	0/0:33,0:32:71.10:0,71,766	0/0:18,0:15:26.92:0,27,300	1/1:5,14:19:36:329,36,0	0/0:18,0:18:42.12:0,42,484	0/0:15,0:15:45.10:0,45,505	0/0:32,1:33:56.71:0,57,883	0/0:20,0:20:57.17:0,57,658	0/0:29,0:29:75.21:0,75,856	0/0:19,0:19:48.13:0,48,544	0/0:28,0:28:80.83:0,81,910	0/0:24,0:24:63.17:0,63,716	0/0:15,0:15:42.12:0,42,484	0/0:27,0:27:69.20:0,69,796	1/1:2,15:17:13.41:377,13,0	0/0:31,0:31:87.25:0,87,995	0/0:18,0:17:45.13:0,45,519	0/0:26,0:26:66.18:0,66,753	0/0:28,0:28:81.24:0,81,935	0/0:23,0:23:63.19:0,63,727	0/0:20,2:22:32.69:0,33,613	0/0:23,0:23:60.17:0,60,685	0/0:26,0:25:69.21:0,69,796	0/0:20,0:20:54.16:0,54,623	0/0:23,0:23:66.18:0,66,751	0/0:31,1:32:56.77:0,57,898	0/0:8,0:8:18.05:0,18,207
chr10	41871784	.	AAACC	A	8636.07	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=16.712;DP=562;FS=28.663;HRun=0;HaplotypeScore=115.8569;InbreedingCoeff=0.9985;MQ=88.67;MQ0=0;MQRankSum=-14.453;QD=47.45;ReadPosRankSum=1.980;VQSLOD=3.4818;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,132,3634	0/0:7,0:7:21.07:0,21,578	0/0:23,0:23:69.24:0,69,1849	0/0:25,0:25:68.10:0,68,1555	0/0:16,0:16:45.15:0,45,1241	1/1:0,14:14:39.13:774,39,0	1/1:0,17:17:42.06:778,42,0	0/0:29,0:29:84.28:0,84,2293	1/1:0,19:19:54.19:1064,54,0	0/0:18,0:18:54.18:0,54,1495	0/0:21,0:21:60.21:0,60,1634	1/1:0,18:18:42.14:832,42,0	1/1:0,25:25:72.25:1402,72,0	1/1:0,22:21:57.20:1123,57,0	0/0:28,0:28:84.29:0,84,2425	0/0:35,1:36:46.11:0,46,2889	1/1:0,22:22:48.16:953,48,0	0/0:9,0:9:27.09:0,27,739	0/0:18,0:18:54.18:0,54,1462	0/0:18,0:18:54.19:0,54,1454	0/0:20,0:20:60.21:0,60,1709	1/1:0,13:13:33.11:639,33,0	1/1:0,14:14:33.11:639,33,0	1/1:0,18:18:23.60:433,24,0	0/0:18,0:18:54.19:0,54,1547	0/0:17,0:17:51.17:0,51,1361	0/0:25,0:25:75.26:0,75,2173	0/0:8,0:8:24.08:0,24,696
chr10	41872899	.	T	TA	3037.80	PASS	AB=0.900;AC=11;AF=0.204;AN=54;BaseQRankSum=-8.778;DP=466;FS=5.665;HRun=5;HaplotypeScore=46.9233;InbreedingCoeff=0.8428;MQ=55.74;MQ0=9;MQRankSum=1.038;QD=26.65;ReadPosRankSum=0.720;VQSLOD=2.9881;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:54.13:0,54,575	0/0:11,0:11:30.07:0,30,322	./.	0/0:10,0:2:2.99:0,3,24	0/0:14,0:14:42.11:0,42,451	0/0:19,0:19:51.13:0,51,548	0/0:15,0:15:13.43:0,13,389	0/0:25,0:20:45.11:0,45,483	0/0:11,0:11:27.07:0,27,290	1/1:2,14:16:45.14:585,45,0	1/1:0,11:11:33.06:415,33,0	0/0:17,0:17:45.11:0,45,483	0/0:17,0:17:45.11:0,45,483	0/0:19,0:19:51.11:0,51,539	1/1:3,27:30:72.23:947,72,0	0/0:21,0:21:57.14:0,57,612	0/0:18,0:18:23.26:0,23,341	1/1:5,22:26:63.20:818,63,0	0/0:21,0:20:60.07:0,60,607	0/0:13,0:13:36.09:0,36,387	0/0:11,0:11:33.08:0,33,355	0/0:15,0:15:42.11:0,42,451	0/0:7,0:7:15.04:0,15,161	0/0:25,0:25:69.16:0,69,734	1/1:1,11:12:33.10:421,33,0	0/1:16,2:18:27.84:28,0,427	0/0:20,0:20:57.14:0,57,612	0/0:12,0:12:36.09:0,36,387
chr10	41872949	.	C	CA	1226.64	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-7.428;DP=412;FS=0.000;HRun=10;HaplotypeScore=50.0399;InbreedingCoeff=0.9496;MQ=73.30;MQ0=0;MQRankSum=0.174;QD=20.79;ReadPosRankSum=2.974;VQSLOD=4.3816;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,23:26:38.49:605,38,0	0/0:9,0:9:23.95:0,24,194	0/0:12,0:11:21.60:0,22,154	0/0:10,0:9:14.10:0,14,94	1/1:2,15:19:47.82:477,48,0	0/0:18,0:18:47.94:0,48,394	0/0:18,0:18:41.92:0,42,345	0/0:26,0:26:61.93:0,62,498	0/0:7,0:7:17.98:0,18,148	0/0:6,0:6:11.98:0,12,98	0/0:7,0:7:17.98:0,18,148	0/0:15,0:15:38.95:0,39,320	0/0:12,0:12:12.06:0,12,214	0/0:17,0:17:43.98:0,44,351	0/0:20,0:19:38.93:0,39,317	1/1:3,11:14:26.82:288,27,0	0/0:16,0:16:44.92:0,45,366	0/0:18,0:18:41.94:0,42,345	0/0:22,0:22:47.90:0,48,390	0/0:11,0:11:29.96:0,30,246	0/0:20,0:20:50.92:0,51,416	0/0:12,0:12:29.94:0,30,243	0/0:4,0:4:11.99:0,12,98	0/0:20,0:20:56.92:0,57,468	0/0:12,0:13:29:0,29,228	0/0:12,0:13:31.99:0,32,252	0/0:13,0:15:29:0,29,228	0/0:12,0:12:17.97:0,18,148
chr10	41873109	.	TAATA	T	444.41	PASS	AB=0.727;AC=9;AF=0.265;AN=34;BaseQRankSum=0.567;DP=232;FS=4.492;HRun=0;HaplotypeScore=45.6501;InbreedingCoeff=0.5720;MQ=64.51;MQ0=1;MQRankSum=0.485;QD=8.39;ReadPosRankSum=3.084;VQSLOD=1.1542;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	0/0:2,0:2:2.98:0,3,22	./.	./.	0/1:5,0:8:0:0,0,0	1/1:12,0:19:9.01:84,9,0	./.	0/0:42,0:46:42.09:0,42,623	./.	0/0:7,0:7:9.03:0,9,150	0/0:7,0:7:6.02:0,6,100	./.	1/1:2,0:4:3:28,3,0	./.	0/0:7,0:7:6.02:0,6,91	1/1:6,0:7:3:28,3,0	1/1:4,11:15:27.09:420,27,0	0/0:13,0:13:9.03:0,9,146	0/0:12,0:15:12.04:0,12,213	./.	./.	./.	./.	0/0:6,0:6:0.47:0,0,1	0/0:6,0:6:9.03:0,9,148	0/0:6,0:8:6.02:0,6,104	0/0:6,0:10:6.02:0,6,108	0/0:3,0:5:6.02:0,6,104
chr10	41873145	.	A	AAATG	1223.97	PASS	AB=1.000;AC=14;AF=0.250;AN=56;BaseQRankSum=5.083;DP=229;FS=2.532;HRun=0;HaplotypeScore=42.5569;InbreedingCoeff=0.4385;MQ=65.00;MQ0=2;MQRankSum=-0.404;QD=14.07;ReadPosRankSum=2.011;VQSLOD=2.4419;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:14.90:0,15,113	0/0:4,0:4:12:0,12,104	0/0:4,0:4:6.46:0,6,57	0/0:5,0:5:15.03:0,15,167	0/0:8,0:8:14.86:0,15,111	0/0:8,0:8:14.93:0,15,135	0/0:1,0:1:3:0,3,25	0/0:37,0:36:71.86:0,72,696	0/0:3,0:3:8.99:0,9,77	1/1:1,5:7:21.03:316,21,0	1/1:1,6:10:17.72:224,18,0	0/0:3,0:3:8.99:0,9,76	0/0:4,0:4:9:0,9,83	0/0:4,0:4:9:0,9,78	1/1:6,0:6:17.99:206,18,0	0/0:4,0:4:9.01:0,9,86	0/0:26,0:26:66.02:0,66,635	1/1:0,15:15:9.03:243,9,0	0/1:14,0:12:31.30:31,0,198	0/0:6,0:6:17.98:0,18,152	0/0:3,0:3:5.96:0,6,45	0/0:1,0:1:2.97:0,3,20	0/0:4,0:3:5.99:0,6,50	0/0:5,0:5:8.92:0,9,70	1/1:0,11:12:9.03:241,9,0	0/1:6,0:6:47.62:48,0,92	0/1:12,0:12:42.17:42,0,146	0/1:5,0:5:47.38:47,0,56
chr10	41874195	.	TGAGAGAGAGAGA	T	5687.83	PASS	AC=30;AF=0.556;AN=54;BaseQRankSum=-0.599;DP=476;FS=1.283;HRun=0;HaplotypeScore=195.1841;InbreedingCoeff=0.8073;MQ=54.51;MQ0=16;MQRankSum=-7.754;QD=24.00;ReadPosRankSum=0.856;VQSLOD=3.9897;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:15:24.55:0,25,1244	0/0:8,0:9:24.08:0,24,1098	0/0:24,0:14:3.01:0,3,39	0/0:31,0:11:0.47:0,0,1	0/0:12,0:15:15.05:0,15,755	1/1:8,3:15:24.05:612,24,0	1/1:9,0:9:3.46:25,3,0	1/1:17,0:17:0.47:1,0,0	1/1:10,10:20:27.09:871,27,0	0/0:27,0:26:32.06:0,32,1472	0/0:16,0:16:34.67:0,35,1090	1/1:7,4:11:9.76:220,10,0	1/1:15,8:23:26.21:898,26,0	1/1:7,6:13:6.02:206,6,0	0/0:21,0:21:23.97:0,24,862	0/0:11,0:11:15.05:0,15,696	0/0:9,0:10:9.03:0,9,226	0/0:10,0:10:18.02:0,18,581	1/1:14,0:17:14.72:346,15,0	1/1:10,0:18:9.03:251,9,0	./.	1/1:5,5:10:5.68:208,6,0	1/1:6,7:13:18.53:625,19,0	1/1:11,7:17:6.49:209,6,0	0/0:32,0:33:50.78:0,51,1436	1/1:14,0:19:15.05:380,15,0	1/1:10,0:19:24.08:670,24,0	1/1:9,0:11:5.98:167,6,0
chr10	41874233	.	AGAGT	A	2131.08	PASS	AB=0.998;AC=22;AF=0.393;AN=56;BaseQRankSum=9.297;DP=437;FS=0.418;HRun=0;HaplotypeScore=130.7602;InbreedingCoeff=-0.1503;MQ=51.69;MQ0=13;MQRankSum=-6.783;QD=7.13;ReadPosRankSum=9.016;VQSLOD=1.5314;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:44.77:0,45,601	0/1:7,0:7:1.08:1,0,360	0/0:18,0:13:31.79:0,32,308	0/0:16,0:9:17.16:0,17,198	0/0:18,0:18:41.88:0,42,416	0/1:21,0:20:14.39:14,0,194	0/0:12,0:12:20.69:0,21,170	0/0:18,0:18:47.95:0,48,423	0/1:14,0:14:50.38:50,0,80	1/1:19,2:21:2.60:529,3,0	1/1:18,2:20:28.21:481,28,0	0/1:9,0:9:11.76:12,0,81	0/1:19,0:19:95.80:96,0,129	0/1:12,0:12:10.52:11,0,81	0/1:26,1:26:23.30:84,0,23	0/0:7,0:6:18.02:0,18,325	0/1:12,0:10:1.34:1,0,134	0/1:8,0:8:47.36:48,0,47	0/0:17,0:17:15.41:0,15,283	0/1:15,0:15:13.72:14,0,102	0/0:10,0:10:11.88:0,12,88	0/1:12,0:12:0.08:0,0,104	0/1:10,0:10:41.80:42,0,47	0/1:17,0:16:10.93:11,0,37	1/1:23,7:30:50.57:713,51,0	0/1:15,0:15:38.40:38,0,189	0/1:17,0:17:74.90:91,0,75	0/1:13,0:10:59.63:60,0,106
chr10	41874235	.	AGT	A	1526.48	PASS	AB=0.989;AC=10;AF=0.179;AN=56;BaseQRankSum=3.466;DP=446;FS=0.000;HRun=0;HaplotypeScore=120.6308;InbreedingCoeff=0.5400;MQ=52.32;MQ0=12;MQRankSum=-0.301;QD=11.39;ReadPosRankSum=4.087;VQSLOD=3.4672;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:29.56:0,30,409	0/0:8,0:8:15.13:0,15,278	0/0:21,0:15:37.86:0,38,365	0/0:18,0:11:20.17:0,20,233	0/0:15,0:15:38.77:0,39,331	0/0:21,0:20:39.46:0,39,264	0/0:12,0:12:20.69:0,21,170	0/0:19,0:19:50.95:0,51,449	0/0:14,0:14:24.94:0,25,141	0/1:21,1:22:4.44:447,0,4	1/1:20,0:20:21.48:316,21,0	0/0:9,0:9:10.83:0,11,97	0/0:20,0:20:4.24:0,4,184	0/0:12,0:12:11.43:0,11,99	1/1:5,21:26:20.98:228,21,0	0/0:8,0:7:12.42:0,12,247	0/0:12,0:10:19.62:0,20,144	0/1:8,0:8:2.55:70,0,3	0/0:19,0:19:52.66:0,53,389	0/0:15,0:15:16.55:0,17,130	0/0:14,0:14:20.87:0,21,162	0/0:12,0:12:18.09:0,18,132	0/0:11,0:11:19.35:0,19,114	0/0:17,0:16:8.37:0,8,54	1/1:26,2:28:57.80:580,58,0	0/0:16,0:16:3.79:0,4,234	0/1:17,0:17:5.17:5,0,100	0/1:12,0:10:37.36:37,0,112
chr10	41874691	.	C	CT	3081.31	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-9.184;DP=678;FS=18.206;HRun=8;HaplotypeScore=68.1868;InbreedingCoeff=0.9853;MQ=73.25;MQ0=2;MQRankSum=-0.095;QD=26.79;ReadPosRankSum=0.010;VQSLOD=2.2051;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,101,1096	0/0:12,0:12:36.02:0,36,330	0/0:27,0:22:19.17:0,19,337	0/0:36,0:30:18.88:0,19,438	0/0:25,0:25:69.03:0,69,631	0/0:31,0:31:87.05:0,87,796	0/0:21,0:21:45:0,45,407	0/0:21,0:21:54.03:0,54,494	0/0:17,0:17:33:0,33,302	1/1:6,31:37:93.28:1071,93,0	1/1:2,21:24:60.09:662,60,0	0/0:24,0:24:69.04:0,69,631	0/0:27,0:27:75.03:0,75,682	0/0:26,0:26:69.02:0,69,631	1/1:2,21:23:54.16:623,54,0	0/0:23,0:23:60.01:0,60,545	0/0:39,0:39:99:0,99,899	1/1:0,12:12:27.08:312,27,0	0/0:20,0:20:45.01:0,45,411	0/0:23,0:23:60.03:0,60,549	0/0:12,0:12:30.01:0,30,275	0/0:25,0:25:69.01:0,69,624	0/0:20,0:20:57.03:0,57,522	0/0:20,0:20:48.02:0,48,439	1/1:1,18:19:51.15:589,51,0	0/0:32,1:32:49.39:0,49,702	0/0:31,0:31:78.03:0,78,713	0/0:5,0:5:9.88:0,10,84
chr10	41877717	.	T	TAA	3486.64	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=14.200;DP=615;FS=12.064;HRun=5;HaplotypeScore=105.1609;InbreedingCoeff=0.9780;MQ=61.67;MQ0=0;MQRankSum=-13.658;QD=24.21;ReadPosRankSum=-2.608;VQSLOD=0.9024;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:93.30:0,93,1184	0/0:10,0:10:24.05:0,24,289	0/0:13,0:13:24.03:0,24,285	0/0:15,0:14:36.07:0,36,427	0/0:24,0:24:72.23:0,72,917	0/0:24,0:24:69.22:0,69,879	0/0:21,0:21:57.18:0,57,726	1/1:17,9:24:44.99:490,45,0	0/0:26,0:26:75.21:0,75,929	0/0:21,0:21:54.17:0,54,688	0/0:24,0:24:72.23:0,72,916	0/0:22,0:22:54.17:0,54,687	0/0:33,0:33:96.27:0,96,1191	0/0:21,0:21:57.16:0,57,712	0/0:23,0:23:66.19:0,66,828	0/0:28,0:28:81.22:0,81,989	0/0:16,0:16:42.11:0,42,520	0/0:14,0:14:36.07:0,36,440	1/1:5,7:12:24.06:278,24,0	1/1:8,30:39:99:1165,105,0	1/1:9,6:15:18.05:206,18,0	0/0:37,0:37:99:0,99,1259	0/0:28,0:28:75.22:0,75,940	0/0:16,0:16:39.11:0,39,480	0/0:24,0:24:60.17:0,60,751	1/1:6,19:24:66.15:751,66,0	1/1:10,14:24:47.79:539,48,0	1/1:1,1:2:6:58,6,0
chr10	41877725	.	C	CAA	4366.30	PASS	AB=0.800;AC=13;AF=0.232;AN=56;BaseQRankSum=15.034;DP=600;FS=6.134;HRun=1;HaplotypeScore=99.4356;InbreedingCoeff=0.9159;MQ=62.43;MQ0=0;MQRankSum=-14.182;QD=35.79;ReadPosRankSum=-2.111;VQSLOD=4.2867;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:93.32:0,93,1516	0/0:8,0:8:24.08:0,24,391	0/0:14,0:13:39.09:0,39,523	0/0:16,0:15:39.10:0,39,580	0/0:28,0:28:84.23:0,84,1311	0/0:24,0:24:72.25:0,72,1174	0/0:21,0:21:63.20:0,63,1003	1/1:1,18:18:47.86:549,48,0	0/0:28,0:28:84.28:0,84,1338	0/0:20,0:20:60.20:0,60,978	0/0:26,0:26:78.23:0,78,1239	0/0:23,0:23:66.21:0,66,1029	0/0:32,0:32:96.32:0,96,1542	0/0:19,0:19:57.19:0,57,908	0/0:26,0:26:78.27:0,78,1264	0/0:29,0:29:81.25:0,81,1270	0/0:16,0:16:45.15:0,45,724	0/0:14,0:14:42.12:0,42,654	1/1:1,7:8:21.07:316,21,0	1/1:4,32:36:99:1426,108,0	1/1:6,6:12:23.99:322,24,0	0/0:39,0:39:99:0,117,1880	0/0:26,0:26:78.24:0,78,1224	0/0:14,0:14:39.12:0,39,612	0/0:24,0:24:69.22:0,69,1102	1/1:3,20:22:66.09:932,66,0	1/1:5,14:19:56.98:742,57,0	0/1:3,1:4:6.90:78,0,7
chr10	41878249	.	TA	T	4205.83	PASS	AC=12;AF=0.222;AN=54;BaseQRankSum=16.179;DP=584;FS=2.633;HRun=6;HaplotypeScore=66.7499;InbreedingCoeff=0.9957;MQ=57.47;MQ0=6;MQRankSum=0.994;QD=28.61;ReadPosRankSum=0.033;VQSLOD=4.1957;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:63.20:0,63,829	0/0:11,0:11:33.11:0,33,434	0/0:19,2:9:22.30:0,22,251	0/0:12,0:5:14.72:0,15,161	0/0:36,0:36:99:0,99,1288	0/0:25,0:25:69.19:0,69,864	0/0:26,0:26:72.23:0,72,935	1/1:3,17:15:35.89:357,36,0	0/0:13,0:13:36.12:0,36,474	0/0:27,0:27:75.24:0,75,984	0/0:25,0:25:75.24:0,75,983	0/0:21,0:21:57.16:0,57,721	0/0:26,0:26:78.23:0,78,997	0/0:17,0:17:51.17:0,51,671	0/0:16,0:16:45.14:0,45,579	0/0:15,0:15:45.15:0,45,592	0/0:33,0:33:81.17:0,81,986	0/0:19,0:19:45.15:0,45,591	1/1:0,18:18:51.12:541,51,0	1/1:0,32:32:96.21:1020,96,0	1/1:0,17:17:48.12:516,48,0	0/0:15,0:15:45.15:0,45,592	0/0:21,0:21:60.17:0,60,749	0/0:11,0:11:30.10:0,30,393	0/0:22,0:22:54.17:0,54,699	1/1:2,26:28:77.98:806,78,0	1/1:0,32:32:90.23:967,90,0	./.
chr10	41878959	.	A	AG	3454.74	PASS	AB=0.825;AC=23;AF=0.411;AN=56;BaseQRankSum=16.455;DP=826;FS=17.457;HRun=5;HaplotypeScore=97.5720;InbreedingCoeff=-0.6993;MQ=51.80;MQ0=32;MQRankSum=-14.833;QD=4.79;ReadPosRankSum=6.550;VQSLOD=-0.6532;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:32,10:41:99:264,0,1156	0/1:12,3:13:8.68:9,0,426	0/0:27,0:4:12.04:0,12,168	0/0:20,0:3:9.03:0,9,126	0/1:24,7:30:99:119,0,756	0/1:24,14:36:99:419,0,901	0/0:16,3:16:45.15:0,45,628	0/0:30,0:29:87.29:0,87,1215	0/1:28,6:33:99:139,0,1022	0/1:21,6:27:99:206,0,788	0/1:20,6:23:29.23:29,0,747	0/1:19,11:27:99:300,0,699	0/1:30,3:33:43.77:44,0,1158	0/1:22,8:30:99:291,0,833	0/1:30,11:40:99:366,0,1022	0/1:22,4:25:67.99:68,0,830	0/1:25,7:30:99:153,0,843	0/1:17,3:20:90.01:90,0,525	0/1:14,4:14:99:101,0,380	0/1:28,5:33:94.93:95,0,1054	0/1:34,8:40:99:128,0,1214	0/1:20,5:25:99:121,0,710	0/1:23,9:29:99:110,0,872	0/1:20,5:24:32.40:32,0,716	0/1:22,10:28:99:253,0,745	0/1:27,5:31:98.18:98,0,1008	0/1:53,4:57:19.41:19,0,2022	0/0:7,2:7:21.07:0,21,294
chr10	41879277	.	TG	T	2627.88	PASS	AB=0.939;AC=13;AF=0.232;AN=56;BaseQRankSum=13.198;DP=708;FS=0.000;HRun=3;HaplotypeScore=116.4859;InbreedingCoeff=0.9028;MQ=73.09;MQ0=2;MQRankSum=-10.067;QD=14.60;ReadPosRankSum=-3.103;VQSLOD=2.0919;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,114,1574	0/0:13,0:13:39.12:0,39,543	0/0:26,0:25:71.91:0,72,904	0/0:31,0:28:65.15:0,65,792	0/0:32,0:32:96.14:0,96,1236	0/0:20,0:20:60.15:0,60,791	0/0:29,0:29:87.23:0,87,1175	1/1:33,5:38:99:892,100,0	0/0:23,0:23:69.23:0,69,991	0/0:29,0:29:84.24:0,84,1135	0/0:23,0:23:69.14:0,69,895	0/0:16,0:16:48.14:0,48,671	0/0:24,0:24:72.16:0,72,983	0/0:24,0:24:69.15:0,69,910	0/0:39,0:39:99:0,117,1555	0/0:25,0:25:75.24:0,75,1059	0/0:36,0:36:99:0,108,1513	0/0:10,0:10:30.09:0,30,412	1/1:17,2:19:42.93:325,43,0	1/1:29,3:32:62.40:456,62,0	1/1:17,1:18:20.72:160,21,0	0/0:27,0:27:78.23:0,78,1082	0/0:23,0:23:66.15:0,66,866	0/0:16,0:16:45.14:0,45,630	0/0:20,0:20:60.19:0,60,846	0/1:29,2:31:11.13:480,0,11	1/1:32,1:32:63.61:416,64,0	1/1:8,1:9:14.58:89,15,0
chr10	41879287	.	TGTTGTTGTTG	T	8765.50	PASS	AB=0.537;AC=13;AF=0.232;AN=56;BaseQRankSum=16.860;DP=693;FS=0.356;HRun=0;HaplotypeScore=216.0044;InbreedingCoeff=0.8901;MQ=66.29;MQ0=2;MQRankSum=-10.755;QD=50.38;ReadPosRankSum=-4.355;VQSLOD=3.8199;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,120,5949	0/0:14,0:14:42.14:0,42,2050	0/0:27,0:25:57.57:0,58,3195	0/0:29,0:26:61.58:0,62,2857	0/0:27,0:27:78.26:0,78,3733	0/0:21,0:21:63.22:0,63,3162	0/0:28,0:28:84.26:0,84,3900	1/1:6,29:35:96.03:2062,96,0	0/0:28,0:28:84.26:0,84,4181	0/0:27,0:27:81.28:0,81,4093	0/0:23,0:23:60.18:0,60,2818	0/0:17,0:17:51.17:0,51,2329	0/0:31,0:31:93.32:0,93,4685	0/0:20,0:20:60.21:0,60,3039	0/0:36,0:36:99:0,108,5082	0/0:24,0:24:72.23:0,72,3494	0/0:34,0:34:99:0,102,4995	0/0:10,0:10:30.10:0,30,1320	1/1:1,16:18:51.08:1054,51,0	1/1:1,36:39:80.15:1987,80,0	1/1:0,18:18:11.95:181,12,0	0/0:28,0:28:84.29:0,84,3918	0/0:18,0:18:54.16:0,54,2487	0/0:16,0:16:48.16:0,48,2470	0/0:21,0:21:63.19:0,63,2965	0/1:3,18:22:86.30:1157,0,86	1/1:1,33:34:64.28:1899,64,0	1/1:1,7:8:15.02:426,15,0
chr10	41879924	.	C	CT	546.71	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-5.783;DP=644;FS=0.000;HRun=6;HaplotypeScore=71.3483;InbreedingCoeff=0.9913;MQ=83.29;MQ0=0;MQRankSum=-2.267;QD=32.16;ReadPosRankSum=0.458;VQSLOD=3.8220;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:60.12:0,60,612	0/0:11,0:11:30.07:0,30,306	0/0:20,0:20:43.27:0,43,456	0/0:17,0:17:36.02:0,36,347	0/0:33,0:33:90.17:0,90,904	0/0:23,0:23:60.13:0,60,610	0/0:21,0:21:54.10:0,54,544	0/0:31,0:31:75.13:0,75,751	0/0:26,0:26:75.15:0,75,759	0/0:35,0:35:96.19:0,96,965	0/0:22,0:22:54.11:0,54,548	0/0:25,0:25:72.16:0,72,734	0/0:24,0:24:69.15:0,69,704	0/0:25,0:25:60.12:0,60,611	0/0:28,0:28:72.14:0,72,727	0/0:22,0:22:63.14:0,63,643	1/1:0,17:17:51.16:642,51,0	0/0:16,0:16:47.28:0,47,455	0/0:17,0:17:45.09:0,45,454	0/0:37,0:37:78.16:0,78,796	0/0:24,0:24:66.14:0,66,673	0/0:24,0:24:66.15:0,66,673	0/0:21,0:21:57.12:0,57,581	0/0:15,0:15:42.09:0,42,428	0/0:18,0:18:48.09:0,48,483	0/0:25,0:25:60.13:0,60,612	0/0:32,0:32:90.18:0,90,904	0/0:6,0:6:18.04:0,18,184
chr10	41881157	.	G	GAATT	11155.39	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=11.867;DP=615;FS=15.614;HRun=0;HaplotypeScore=118.1295;InbreedingCoeff=0.9933;MQ=80.08;MQ0=0;MQRankSum=-16.510;QD=72.44;ReadPosRankSum=-4.694;VQSLOD=4.4360;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,105,2016	0/0:10,0:10:30.10:0,30,598	0/0:16,0:16:47.18:0,47,841	0/0:21,0:20:57.16:0,57,1066	0/0:27,0:27:78.27:0,78,1503	0/0:28,0:28:84.29:0,84,1659	0/0:21,0:21:60.17:0,60,1115	1/1:12,24:36:99:2817,105,0	0/0:15,0:15:45.15:0,45,898	0/0:28,0:28:84.29:0,84,1678	0/0:23,0:23:69.22:0,69,1328	0/0:15,0:15:45.14:0,45,864	0/0:26,0:26:78.27:0,78,1558	0/0:29,0:29:87.30:0,87,1726	0/0:29,0:29:84.29:0,84,1678	0/0:25,0:25:75.24:0,75,1463	0/0:21,0:21:60.21:0,60,1198	0/0:10,0:10:27.09:0,27,539	1/1:8,10:18:51.16:1222,51,0	1/1:3,27:30:87.30:2391,87,0	1/1:5,5:10:20.79:304,21,0	0/0:27,0:27:78.27:0,78,1557	0/0:17,0:17:48.16:0,48,959	0/0:16,0:16:45.13:0,45,862	0/0:22,0:22:66.21:0,66,1263	1/1:9,17:26:75.16:1863,75,0	1/1:6,23:30:84.20:2223,84,0	1/1:0,4:4:12.04:335,12,0
chr10	41881169	.	G	GA	4675.45	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=8.418;DP=627;FS=11.952;HRun=4;HaplotypeScore=94.3808;InbreedingCoeff=0.9630;MQ=85.85;MQ0=0;MQRankSum=-10.806;QD=30.56;ReadPosRankSum=-1.701;VQSLOD=3.3801;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:96.26:0,96,1077	0/0:13,0:13:33.06:0,33,353	0/0:23,0:23:31.44:0,31,449	0/0:23,0:22:50.72:0,51,512	0/0:27,0:27:78.20:0,78,865	0/0:30,0:29:78.07:0,78,842	0/0:18,0:18:54.11:0,54,583	1/1:8,28:36:84.23:1078,84,0	0/0:18,0:18:48.12:0,48,534	0/0:28,0:28:84.22:0,84,935	0/0:21,0:21:57.14:0,57,632	0/0:15,0:15:45.13:0,45,510	0/0:26,0:26:69.18:0,69,771	0/0:29,0:29:84.24:0,84,952	0/0:30,0:30:87.25:0,87,985	0/0:21,0:21:60.13:0,60,659	0/0:22,0:22:63.14:0,63,693	0/0:6,0:6:15.04:0,15,170	1/1:3,15:18:48.16:640,48,0	1/1:5,27:32:78.16:1012,78,0	1/1:1,9:10:17.64:197,18,0	0/0:32,0:32:87.20:0,87,955	0/0:17,0:17:48.13:0,48,539	0/0:18,0:18:48.10:0,48,524	0/0:24,0:24:69.13:0,69,757	1/1:5,23:28:38.16:863,38,0	1/1:6,21:27:63.21:844,63,0	1/1:1,1:2:3.01:41,3,0
chr10	41881992	.	T	TTTTG	6979.63	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-4.490;DP=594;FS=1.800;HRun=0;HaplotypeScore=98.8219;InbreedingCoeff=0.9829;MQ=69.99;MQ0=4;MQRankSum=-1.241;QD=45.03;ReadPosRankSum=-1.654;VQSLOD=4.8630;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:58.34:0,58,1095	0/0:5,0:5:12.03:0,12,173	0/0:26,0:20:36.01:0,36,496	0/0:26,0:22:45.13:0,45,659	0/0:26,0:26:69.22:0,69,1089	0/0:25,0:25:57.18:0,57,910	0/0:13,0:13:21.06:0,21,319	1/1:9,21:31:69.12:1212,69,0	0/0:8,0:8:24.07:0,24,371	0/0:30,0:30:81.28:0,81,1323	0/0:32,0:32:63.20:0,63,982	0/0:22,0:22:48.16:0,48,789	0/0:17,0:17:48.13:0,48,720	0/0:19,0:19:45.15:0,45,728	0/0:22,0:22:57.18:0,57,880	0/0:15,0:15:39.13:0,39,624	0/0:17,0:17:39.13:0,39,627	0/0:20,0:21:18.15:0,18,578	1/1:9,11:20:14.53:741,15,0	1/1:8,23:31:69.08:1468,69,0	1/1:1,14:15:36.12:863,36,0	0/0:25,0:25:60.20:0,60,953	0/0:24,0:24:57.17:0,57,913	0/0:12,0:12:33.08:0,33,490	0/0:23,0:23:62.80:0,63,1026	1/1:3,15:18:45.15:1011,45,0	1/1:7,21:30:57.20:1392,57,0	1/1:2,6:8:12.04:293,12,0
chr10	41883086	.	T	TATGTTAGCCAA	22876.99	PASS	AB=0.667;AC=11;AF=0.204;AN=54;BaseQRankSum=-3.767;DP=695;FS=1.896;HRun=0;HaplotypeScore=222.1503;InbreedingCoeff=0.8821;MQ=82.23;MQ0=0;MQRankSum=-17.117;QD=136.17;ReadPosRankSum=-2.240;VQSLOD=4.9255;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:54.17:0,54,1761	0/0:14,0:14:42.14:0,42,1513	0/0:27,0:27:81.27:0,81,2358	0/0:19,0:19:48:0,48,1214	0/0:38,0:38:99:0,108,3733	0/0:39,0:38:99:0,114,3955	0/0:27,0:27:81.28:0,81,2799	1/1:24,12:38:99:5263,111,0	0/0:27,0:27:81.28:0,81,2831	0/0:37,0:37:99:0,111,3811	0/0:32,0:32:96.31:0,96,3264	0/0:16,0:16:45.14:0,45,1538	0/0:23,0:23:69.24:0,69,2402	0/0:23,0:23:63.20:0,63,2086	0/0:33,0:33:96.33:0,96,3363	0/0:30,0:30:84.29:0,84,2958	0/0:20,0:20:57.20:0,57,2055	0/0:11,0:11:30.10:0,30,956	1/1:6,8:16:48.15:2099,48,0	1/1:16,20:39:99:5378,105,0	1/1:4,2:9:15.05:743,15,0	0/0:20,0:20:57.20:0,57,2040	0/0:29,0:29:87.28:0,87,2946	0/0:18,0:18:48.12:0,48,1529	0/0:26,0:26:78.27:0,78,2716	0/1:13,11:26:33.62:3740,0,34	1/1:13,24:39:99:5655,111,0	./.
chr10	41883796	.	T	TG	1508	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=3.450;DP=320;FS=2.778;HRun=7;HaplotypeScore=52.8670;InbreedingCoeff=0.9070;MQ=83.30;MQ0=1;MQRankSum=-2.140;QD=18.85;ReadPosRankSum=-1.737;VQSLOD=2.9681;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:24.03:0,24,232	0/0:3,0:3:6.01:0,6,58	0/0:27,1:21:22.73:0,23,256	0/0:24,0:18:25.28:0,25,294	0/0:10,0:10:21.03:0,21,203	0/0:20,0:20:57.09:0,57,550	0/0:13,0:13:39.06:0,39,377	1/1:7,8:15:27.01:284,27,0	0/0:11,0:11:24.01:0,24,232	0/0:14,0:14:36.05:0,36,347	0/0:11,0:11:21.03:0,21,203	0/0:5,0:5:12.01:0,12,116	0/0:8,0:8:15:0,15,138	0/0:13,0:13:30.05:0,30,289	0/0:13,0:13:30.05:0,30,290	0/0:9,0:9:15.01:0,15,140	0/0:4,0:4:9.01:0,9,87	0/0:3,0:3:9:0,9,81	1/1:3,1:4:6.02:72,6,0	1/1:8,8:16:18.06:217,18,0	1/1:0,11:11:24.07:290,24,0	0/0:10,0:10:18.01:0,18,167	0/0:12,0:12:24.03:0,24,232	0/0:5,0:5:9.01:0,9,86	0/0:12,0:12:24.03:0,24,231	1/1:4,10:14:30.05:346,30,0	1/1:4,10:14:29.19:344,29,0	1/1:2,4:6:12.04:145,12,0
chr10	41883825	.	GGGGA	G	948.14	PASS	AB=0.990;AC=16;AF=0.286;AN=56;BaseQRankSum=4.164;DP=332;FS=5.804;HRun=0;HaplotypeScore=63.8679;InbreedingCoeff=0.3466;MQ=51.95;MQ0=26;MQRankSum=-3.195;QD=8.62;ReadPosRankSum=-0.970;VQSLOD=0.8730;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:11,0:11:29.25:29,0,503	0/0:1,0:1:3.01:0,3,84	0/0:51,0:16:42.56:0,43,857	0/0:47,0:10:26.88:0,27,651	0/0:10,0:9:27.06:0,27,552	0/0:18,3:17:41.82:0,42,912	0/0:13,0:8:18.06:0,18,410	1/1:17,0:17:25:249,25,0	0/1:14,1:15:68.99:69,0,589	0/0:11,0:11:33.11:0,33,836	0/0:6,0:6:14.98:0,15,307	0/0:7,1:8:4.05:0,4,344	0/0:4,0:4:12.04:0,12,227	0/1:9,0:9:34.17:34,0,531	0/0:8,0:8:16.08:0,16,438	0/0:7,0:7:17.91:0,18,322	0/0:6,0:4:12.04:0,12,266	0/0:1,0:1:3.01:0,3,87	1/1:6,0:5:14.87:105,15,0	0/1:7,0:7:9:45,0,9	0/1:9,0:8:20.49:75,0,20	0/1:9,0:8:49.88:55,0,50	0/0:7,1:8:17.90:0,18,447	0/0:6,5:11:11.59:0,12,226	0/0:9,0:8:21.05:0,21,483	1/1:11,1:12:7.74:248,8,0	1/1:12,0:11:4.35:140,4,0	1/1:3,0:3:8.89:71,9,0
chr10	41883827	.	GGA	G	2004.64	PASS	AB=0.946;AC=19;AF=0.339;AN=56;BaseQRankSum=2.782;DP=327;FS=6.990;HRun=0;HaplotypeScore=52.1293;InbreedingCoeff=0.5212;MQ=51.81;MQ0=26;MQRankSum=-2.029;QD=17.13;ReadPosRankSum=-1.964;VQSLOD=1.8758;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:12,0:12:32.90:33,0,312	0/0:1,0:1:3.01:0,3,47	0/0:48,1:14:22.32:0,22,511	0/0:46,0:9:24.08:0,24,418	0/0:10,0:9:22.31:0,22,322	0/0:21,0:17:41.90:0,42,605	0/0:12,0:8:18.04:0,18,260	1/1:10,5:15:43.02:572,43,0	0/1:15,1:16:66.89:67,0,380	0/0:11,0:11:33.11:0,33,564	0/0:6,0:6:15.05:0,15,222	0/1:7,1:8:15.63:16,0,220	0/0:4,0:4:11.53:0,12,141	0/1:9,0:9:8.56:9,0,335	0/0:8,0:8:21.07:0,21,317	0/0:7,0:7:15.05:0,15,219	0/0:6,0:4:12.04:0,12,181	0/0:1,0:1:3.01:0,3,58	1/1:6,1:6:15.50:198,16,0	1/1:3,4:7:9.90:110,10,0	1/1:3,5:7:15.05:229,15,0	0/1:8,1:8:30.54:31,0,31	0/0:8,0:8:17.95:0,18,298	0/0:11,0:11:11.90:0,12,146	0/0:8,0:7:18.06:0,18,303	1/1:5,6:11:33.11:461,33,0	1/1:6,6:11:27.05:359,27,0	1/1:2,1:3:9.03:115,9,0
chr10	41883876	.	AAATTGG	A	3057.67	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=7.420;DP=355;FS=6.251;HRun=0;HaplotypeScore=76.0765;InbreedingCoeff=0.5673;MQ=68.76;MQ0=13;MQRankSum=-5.676;QD=22.32;ReadPosRankSum=-0.788;VQSLOD=1.9277;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:8:24.08:0,24,805	0/0:3,0:3:9.03:0,9,305	0/0:19,0:14:42.07:0,42,1237	0/0:44,0:23:68.88:0,69,2113	0/0:14,0:14:41.81:0,42,1246	0/1:23,0:22:0.71:1,0,1324	0/0:11,0:10:19.31:0,19,608	1/1:0,20:20:57.67:1360,58,0	0/0:12,0:12:18.83:0,19,887	0/1:15,0:15:74.75:75,0,1054	0/1:11,0:11:13.16:13,0,756	0/0:6,0:6:11.32:0,11,461	0/1:8,0:8:0.46:0,0,659	0/0:12,0:12:27.09:0,27,874	0/0:13,0:13:33.11:0,33,1141	0/0:13,0:13:16.28:0,16,870	0/0:6,0:5:15.05:0,15,426	0/0:4,0:3:4.20:0,4,191	1/1:0,7:7:21.07:454,21,0	1/1:1,11:12:6.02:109,6,0	1/1:0,7:7:0.47:1,0,0	0/0:19,0:22:48.12:0,48,1561	0/1:7,0:7:10.18:10,0,294	0/0:15,0:14:24.55:0,25,698	0/0:15,0:15:15.49:0,15,1008	1/1:0,7:7:21.07:523,21,0	1/1:2,11:12:23.57:479,24,0	1/1:1,6:7:9.03:213,9,0
chr10	41884144	.	A	AAACAAAGACGG	15318	PASS	AC=12;AF=0.222;AN=54;BaseQRankSum=-5.155;DP=539;FS=3.532;HRun=0;HaplotypeScore=167.7065;InbreedingCoeff=0.9722;MQ=88.37;MQ0=0;MQRankSum=-14.332;QD=119.67;ReadPosRankSum=-2.258;VQSLOD=4.8761;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,117,4129	0/0:2,0:2:6.02:0,6,212	0/0:28,0:28:75.21:0,75,2286	0/0:19,0:19:54.18:0,54,1679	0/0:21,0:21:54.18:0,54,1784	0/0:26,0:26:75.26:0,75,2568	0/0:13,0:13:33.11:0,33,1107	1/1:14,5:23:54.61:1914,55,0	0/0:12,0:12:33.10:0,33,1077	0/0:24,0:24:66.23:0,66,2231	0/0:20,0:20:57.18:0,57,1841	0/0:20,0:20:54.19:0,54,1855	0/0:20,0:20:60.18:0,60,1898	0/0:25,0:25:75.26:0,75,2449	0/0:24,0:24:66.23:0,66,2194	0/0:20,0:20:57.19:0,57,1866	0/0:15,0:15:45.13:0,45,1410	0/0:9,0:9:27.07:0,27,820	1/1:16,15:33:87.29:3896,87,0	1/1:5,19:27:69.24:3803,69,0	1/1:3,2:8:12.04:541,12,0	0/0:18,0:18:48.16:0,48,1694	0/0:14,0:14:42.14:0,42,1478	0/0:19,0:19:51.17:0,51,1662	0/0:21,0:21:60.18:0,60,1987	1/1:6,5:12:36.11:1807,36,0	1/1:10,14:24:63.22:3357,63,0	./.
chr10	41884378	.	T	TA	1959.99	PASS	AC=12;AF=0.222;AN=54;BaseQRankSum=5.801;DP=487;FS=16.847;HRun=8;HaplotypeScore=103.7526;InbreedingCoeff=0.9364;MQ=70.52;MQ0=1;MQRankSum=-7.644;QD=19.41;ReadPosRankSum=-3.453;VQSLOD=1.7352;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:26:26.48:0,26,384	0/0:9,0:9:24.01:0,24,220	0/0:31,0:25:57.67:0,58,495	0/0:23,0:18:9.81:0,10,240	0/0:30,0:29:57.88:0,58,519	0/0:11,0:11:24.79:0,25,222	0/0:13,0:13:33.01:0,33,302	1/1:7,16:23:54.40:562,54,0	0/0:9,0:9:24.01:0,24,220	0/0:18,0:18:37.10:0,37,341	0/0:30,0:30:89.95:0,90,811	0/0:14,0:14:32.86:0,33,288	0/0:18,0:18:34.63:0,35,318	0/0:6,0:6:12:0,12,110	0/0:23,0:23:66.01:0,66,597	0/0:19,0:19:48.02:0,48,438	0/0:20,0:20:42.02:0,42,383	0/0:24,0:24:66.03:0,66,604	1/1:5,10:15:30.40:369,30,0	1/1:4,9:13:21.06:234,21,0	1/1:3,6:9:18.05:198,18,0	0/0:11,0:11:27.01:0,27,247	0/0:15,0:15:23.92:0,24,219	0/0:13,0:13:29.99:0,30,267	0/0:22,0:22:57:0,57,515	1/1:4,16:21:2.03:471,2,0	1/1:7,13:20:36.98:303,37,0	./.
chr10	41884398	.	CAAAAA	C	2180.57	PASS	AB=0.839;AC=11;AF=0.204;AN=54;BaseQRankSum=7.320;DP=532;FS=10.011;HRun=5;HaplotypeScore=154.0075;InbreedingCoeff=0.5324;MQ=59.24;MQ0=14;MQRankSum=-6.313;QD=13.71;ReadPosRankSum=-1.630;VQSLOD=-0.6458;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:60.67:0,61,1413	0/0:7,0:7:18.05:0,18,485	0/0:49,0:20:14.08:0,14,899	0/1:53,0:24:27.34:27,0,373	0/0:24,0:23:57.15:0,57,1500	0/0:13,0:12:6.77:0,7,703	0/0:12,0:12:36.09:0,36,767	0/1:21,7:29:7.14:650,0,7	0/0:10,0:10:30.10:0,30,725	0/0:20,0:20:57.66:0,58,1670	0/0:32,0:32:96.25:0,96,2619	0/0:13,0:13:31.91:0,32,761	0/0:18,0:18:52.69:0,53,1053	0/0:7,0:7:16.85:0,17,326	0/0:18,0:18:54.19:0,54,1674	0/0:17,0:17:48.05:0,48,1308	0/0:25,0:25:49.97:0,50,1282	0/0:25,0:25:75.08:0,75,2145	1/1:17,3:21:1.11:306,1,0	1/1:4,1:6:12.03:149,12,0	1/1:5,2:6:1.61:86,2,0	0/0:8,0:8:24.06:0,24,515	0/0:13,0:14:27.02:0,27,492	0/0:13,0:13:31.09:0,31,732	0/0:18,0:18:54.11:0,54,1274	0/1:11,8:21:15.25:617,0,15	1/1:5,10:16:39.67:496,40,0	./.
chr10	41884400	.	AAAAC	A	990.76	PASS	AB=0.975;AC=13;AF=0.241;AN=54;BaseQRankSum=8.036;DP=530;FS=19.985;HRun=0;HaplotypeScore=147.9112;InbreedingCoeff=-0.1387;MQ=59.15;MQ0=17;MQRankSum=-8.672;QD=5.24;ReadPosRankSum=-3.032;VQSLOD=0.0820;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:39.50:0,40,970	0/0:8,0:8:18.04:0,18,356	0/0:58,0:20:30.57:0,31,644	0/0:58,0:24:4.91:0,5,185	0/0:23,0:22:54.17:0,54,1138	0/1:12,1:12:39.95:40,0,338	0/0:10,0:10:11.08:0,11,325	0/1:30,0:29:99:245,0,226	0/0:10,0:10:5.20:0,5,290	0/0:21,0:21:60.67:0,61,1307	0/0:29,0:29:83.73:0,84,1871	0/1:11,1:12:16.98:17,0,343	0/1:17,1:18:99:101,0,416	0/1:7,0:7:50.73:51,0,113	0/0:18,0:18:54.15:0,54,1235	0/0:17,0:17:45.14:0,45,1007	0/1:26,0:26:48.37:48,0,584	0/0:25,0:25:69.21:0,69,1611	0/1:22,0:20:77.27:77,0,203	1/1:6,0:6:8.93:64,9,0	0/1:7,0:6:19.83:20,0,26	0/0:8,0:8:18.01:0,18,245	0/0:12,0:12:17.97:0,18,250	0/1:12,1:13:99:105,0,337	0/0:18,0:18:51.09:0,51,896	0/1:20,0:20:64.34:227,0,64	0/1:15,0:15:9.06:149,0,9	./.
chr10	41884404	.	C	CAA	4200.09	PASS	AB=0.611;AC=19;AF=0.352;AN=54;BaseQRankSum=-2.762;DP=535;FS=7.290;HRun=8;HaplotypeScore=124.8925;InbreedingCoeff=0.8704;MQ=56.53;MQ0=22;MQRankSum=0.412;QD=33.07;ReadPosRankSum=1.509;VQSLOD=2.6587;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:29.17:0,29,438	0/0:7,0:7:15.04:0,15,166	0/0:62,0:18:34.02:0,34,319	0/0:66,0:24:15.82:0,16,116	0/0:22,0:21:48.10:0,48,522	1/1:6,6:12:28.67:469,29,0	1/1:4,8:12:33.10:497,33,0	0/0:25,0:31:52.05:0,52,568	1/1:2,8:10:27.09:427,27,0	0/0:22,0:22:57.15:0,57,634	0/0:28,0:28:74.67:0,75,802	1/1:3,9:12:24.08:380,24,0	1/1:9,7:17:38.81:583,39,0	1/1:2,5:7:15.02:211,15,0	0/0:18,0:18:51.09:0,51,541	0/0:16,0:16:45.10:0,45,486	1/1:1,25:26:48.16:762,48,0	0/0:25,0:25:55.67:0,56,678	0/0:19,0:20:39.48:0,39,386	0/0:4,0:5:2.98:0,3,23	0/0:3,0:4:7.25:0,7,60	1/1:3,3:6:12.04:190,12,0	0/1:4,7:11:14.49:209,0,14	1/1:4,9:13:30.10:473,30,0	0/0:19,0:19:36.08:0,36,399	0/0:10,0:18:34.89:0,35,264	0/0:4,0:14:35.98:0,36,348	./.
chr10	41884429	.	C	CAA	1234.35	PASS	AB=1.000;AC=7;AF=0.130;AN=54;BaseQRankSum=-0.532;DP=543;FS=8.720;HRun=0;HaplotypeScore=132.5942;InbreedingCoeff=0.7762;MQ=54.97;MQ0=30;MQRankSum=1.781;QD=8.34;ReadPosRankSum=3.164;VQSLOD=2.9464;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:10,15:26:46.83:651,47,0	0/0:5,0:5:12.04:0,12,181	0/1:88,0:9:7.96:8,0,91	0/0:82,0:25:30.57:0,31,236	1/1:5,4:19:37.67:320,38,0	0/0:12,0:12:33.03:0,33,327	0/0:14,0:14:39.09:0,39,441	0/0:26,0:26:72.18:0,72,886	0/0:10,0:10:30.06:0,30,329	0/0:28,0:28:72.71:0,73,1099	0/0:18,0:18:28.28:0,28,678	0/0:11,0:11:23.98:0,24,241	0/0:17,0:17:34.47:0,34,398	0/0:8,0:8:21.03:0,21,217	0/0:10,0:10:30.10:0,30,471	1/1:5,8:14:25.55:400,26,0	0/0:28,0:28:70.07:0,70,977	0/0:25,0:25:69.18:0,69,1088	0/0:20,0:19:52.19:0,52,587	0/0:2,0:2:3.01:0,3,36	0/0:3,0:3:9.03:0,9,112	0/0:12,0:12:17.88:0,18,258	0/0:7,0:7:15.01:0,15,147	0/0:13,0:13:29.99:0,30,282	0/0:18,0:18:48.11:0,48,735	0/0:13,0:12:32.22:0,32,337	0/0:13,0:12:35.52:0,36,408	./.
chr10	41884430	.	C	CA	2736.41	PASS	AB=0.795;AC=33;AF=0.635;AN=52;BaseQRankSum=9.606;DP=542;FS=2.182;HRun=9;HaplotypeScore=117.8319;InbreedingCoeff=0.6460;MQ=55.96;MQ0=30;MQRankSum=-5.642;QD=8.55;ReadPosRankSum=3.261;VQSLOD=2.0218;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:27:48.63:256,49,0	0/0:5,0:5:11.99:0,12,102	0/0:90,1:11:1.72:0,2,30	0/1:82,0:26:18.47:24,0,18	1/1:15,0:18:34.87:184,35,0	1/1:5,7:12:21.05:223,21,0	1/1:3,12:15:33.08:357,33,0	1/1:24,0:24:7.83:39,8,0	1/1:3,7:10:21.05:228,21,0	0/0:27,0:27:62.71:0,63,521	0/0:18,0:18:27.87:0,28,235	0/1:8,3:11:9.83:102,0,10	1/1:7,10:18:25.14:473,25,0	1/1:3,5:8:18.04:188,18,0	0/0:11,0:11:20.98:0,21,182	1/1:12,0:16:31.62:184,32,0	0/0:26,0:26:58.20:0,58,387	0/0:25,0:25:68.81:0,69,582	1/1:19,0:18:19.81:90,20,0	./.	1/1:3,0:3:2.22:7,2,0	0/1:4,7:12:17.28:125,0,17	1/1:5,2:7:2.15:89,2,0	1/1:0,11:11:21.02:218,21,0	0/0:17,0:17:22.21:0,22,306	1/1:12,0:11:11.86:40,12,0	1/1:13,0:12:24.05:101,24,0	./.
chr10	41884439	.	AC	A	1013.66	PASS	AB=0.973;AC=14;AF=0.269;AN=52;BaseQRankSum=8.395;DP=477;FS=0.531;HRun=1;HaplotypeScore=107.5719;InbreedingCoeff=0.5125;MQ=53.31;MQ0=26;MQRankSum=-7.364;QD=4.80;ReadPosRankSum=-1.887;VQSLOD=-0.3666;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:56.07:0,56,274	0/0:5,0:5:11.86:0,12,112	0/1:67,5:10:2.10:2,0,129	0/1:58,3:19:3.88:4,0,69	0/1:18,0:17:21.47:21,0,56	0/0:9,0:9:0.35:0,0,38	0/0:14,0:14:2.23:0,2,91	1/1:7,8:15:39.47:385,39,0	0/0:7,0:7:16.05:0,16,66	0/0:27,0:27:72.45:0,72,752	0/0:14,0:14:35.52:0,36,317	0/0:10,0:10:0.98:0,1,132	0/0:18,0:18:29.87:0,30,190	0/1:8,0:8:6.61:7,0,44	0/0:9,0:9:27.03:0,27,277	0/0:18,0:18:37.60:0,38,220	0/0:30,0:30:38.95:0,39,365	0/0:25,0:25:68.95:0,69,724	1/1:5,9:13:16.95:265,17,0	./.	1/1:0,1:1:3.01:30,3,0	0/0:11,0:11:26.85:0,27,170	0/0:6,0:6:7.41:0,7,84	0/0:13,0:13:24.55:0,25,126	0/0:19,0:19:30.18:0,30,429	1/1:2,5:6:17.96:170,18,0	1/1:2,10:11:31.62:291,32,0	./.
chr10	41884441	.	AAAAAAAACC	A	2364.95	PASS	AC=12;AF=0.222;AN=54;BaseQRankSum=7.063;DP=473;FS=2.889;HRun=0;HaplotypeScore=152.1445;InbreedingCoeff=0.9060;MQ=53.38;MQ0=24;MQRankSum=-7.762;QD=44.62;ReadPosRankSum=1.020;VQSLOD=3.7178;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:66.65:0,67,2690	0/0:5,0:5:12:0,12,475	0/0:70,0:9:22.89:0,23,709	0/0:62,0:19:40.11:0,40,670	0/0:18,0:17:39.60:0,40,1415	0/0:9,0:9:24.04:0,24,841	0/0:14,0:14:33.09:0,33,1372	1/1:9,6:15:43.71:710,44,0	0/0:7,0:7:21.07:0,21,925	0/0:26,0:26:70.79:0,71,3074	0/0:13,0:13:36.08:0,36,1385	0/0:10,0:10:27.09:0,27,1103	0/0:18,0:18:51.18:0,51,2215	0/0:8,0:8:21.07:0,21,653	0/0:9,0:9:27.09:0,27,1224	0/0:18,0:18:48.16:0,48,1978	0/0:31,0:31:84.28:0,84,3319	0/0:26,0:26:72.24:0,72,3120	1/1:5,9:13:13.39:668,13,0	1/1:1,1:2:2.94:18,3,0	1/1:0,1:1:3.01:73,3,0	0/0:11,0:11:30.10:0,30,1309	0/0:6,0:6:18.06:0,18,741	0/0:13,0:13:27.09:0,27,1013	0/0:17,0:17:51.03:0,51,1903	1/1:3,5:7:15.94:369,16,0	1/1:4,9:12:32.32:697,32,0	./.
chr10	41885517	.	A	AAGAATT	3446.85	PASS	AC=14;AF=0.700;AN=20;BaseQRankSum=-2.749;DP=177;FS=56.887;HRun=0;HaplotypeScore=45.9858;InbreedingCoeff=0.8898;MQ=79.89;MQ0=45;MQRankSum=-6.848;QD=42.03;ReadPosRankSum=-0.707;VQSLOD=1.3135;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	0/0:9,1:10:24.08:0,24,555	0/0:16,0:16:42.14:0,42,904	0/0:10,0:10:27.06:0,27,573	1/1:3,12:13:21.07:738,21,0	./.	./.	./.	./.	1/1:2,6:6:18.06:635,18,0	1/1:4,8:10:18.06:561,18,0	./.	./.	./.	./.	./.	1/1:5,0:2:3.01:106,3,0	./.	./.	./.	./.	1/1:8,4:10:15.05:437,15,0	1/1:6,7:12:12.04:354,12,0	./.	1/1:5,9:13:18.06:616,18,0	./.	./.	./.
chr10	41885696	.	CT	C	1110.04	PASS	AB=0.586;AC=12;AF=0.300;AN=40;BaseQRankSum=0.448;DP=498;FS=0.000;HRun=7;HaplotypeScore=41.9331;InbreedingCoeff=0.1550;MQ=29.01;MQ0=136;MQRankSum=-1.193;QD=5.72;ReadPosRankSum=0.413;VQSLOD=-0.6736;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:27:27.09:0,27,339	0/0:7,0:3:3.01:0,3,38	./.	./.	0/0:26,0:12:3.01:0,3,38	0/1:4,21:22:13.65:187,0,14	1/1:7,9:9:20.99:200,21,0	./.	0/1:3,19:20:4.63:272,0,5	0/0:22,0:13:39.12:0,39,491	0/0:21,0:6:0:0,0,0	0/1:5,19:23:48.34:186,0,48	0/1:6,13:15:51.35:157,0,51	0/1:8,13:20:70.69:71,0,119	0/0:17,0:14:20.98:0,21,225	0/0:22,0:20:33.07:0,33,384	0/0:31,0:21:18.02:0,18,209	0/0:19,0:8:9.03:0,9,113	./.	./.	./.	0/1:8,8:8:25.68:78,0,26	1/1:9,15:8:3.01:31,3,0	1/1:1,26:24:6.01:61,6,0	./.	0/0:8,0:4:12.04:0,12,151	0/0:10,0:3:6.02:0,6,75	./.
chr10	41885843	.	G	GC	312.88	PASS	AB=0.900;AC=7;AF=0.152;AN=46;BaseQRankSum=7.962;DP=624;FS=61.688;HRun=0;HaplotypeScore=92.6662;InbreedingCoeff=0.0549;MQ=60.40;MQ0=5;MQRankSum=-6.616;QD=1.61;ReadPosRankSum=0.154;VQSLOD=-0.7516;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:51,9:59:99:190,0,1554	0/0:12,0:12:36.11:0,36,478	0/0:37,0:29:70.60:0,71,985	0/0:25,0:19:32.55:0,33,609	0/0:35,0:35:66.22:0,66,914	0/0:30,1:30:0.31:0,0,564	0/0:30,2:30:30.36:0,30,992	./.	0/0:27,4:28:9.44:0,9,706	0/0:25,0:25:75.24:0,75,1034	0/0:21,0:20:51.17:0,51,708	0/0:24,2:24:39.12:0,39,524	0/1:29,2:31:23.44:23,0,806	0/1:18,2:19:23.56:24,0,269	0/0:25,3:26:39.12:0,39,528	0/0:29,2:29:57.09:0,57,796	0/1:38,6:42:76.61:77,0,1312	0/0:26,1:25:18.22:0,18,804	1/1:0,3:2:6.02:96,6,0	./.	./.	0/0:21,0:21:57.19:0,57,784	0/0:20,0:19:51.17:0,51,694	0/1:32,4:36:26.37:26,0,810	0/0:17,1:17:39.13:0,39,544	0/0:2,2:2:6.02:0,6,84	./.	./.
chr10	41885935	.	A	AT	3622.97	PASS	AB=0.842;AC=23;AF=0.460;AN=50;BaseQRankSum=4.803;DP=1213;FS=5.512;HRun=1;HaplotypeScore=131.8902;InbreedingCoeff=-0.6936;MQ=34.78;MQ0=149;MQRankSum=-6.433;QD=3.64;ReadPosRankSum=2.211;VQSLOD=0.4391;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:48,15:54:99:289,0,934	0/1:20,4:17:99:136,0,344	./.	./.	0/1:40,6:33:63.75:64,0,595	0/1:40,5:37:84.79:85,0,836	0/1:32,5:21:94.56:95,0,483	./.	0/1:48,8:43:73.48:73,0,1078	0/1:74,11:50:99:174,0,1480	0/1:44,11:42:99:289,0,907	0/0:45,3:41:51.69:0,52,1119	0/1:37,6:40:46.93:47,0,873	0/1:36,4:34:22.02:22,0,705	0/1:44,7:41:28.25:28,0,809	0/0:42,6:40:42.73:0,43,1001	0/1:44,19:57:99:536,0,914	0/1:37,5:33:99:104,0,704	1/1:8,7:8:8.89:255,9,0	0/1:25,10:21:99:256,0,217	0/1:11,10:20:99:219,0,116	0/0:51,6:40:12.98:0,13,1104	0/1:64,6:56:7.45:7,0,1337	0/1:53,9:57:99:157,0,1112	0/1:41,9:39:99:258,0,823	0/1:30,13:29:99:363,0,609	0/1:14,7:10:70.68:71,0,106	0/1:21,6:18:95.31:95,0,348
chr10	41885936	.	T	TAA	585.83	PASS	AB=0.736;AC=4;AF=0.080;AN=50;BaseQRankSum=-2.845;DP=1216;FS=5.744;HRun=7;HaplotypeScore=164.4577;InbreedingCoeff=-0.0256;MQ=34.65;MQ0=153;MQRankSum=-1.768;QD=6.37;ReadPosRankSum=-1.107;VQSLOD=-0.3632;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:63,0:54:84.31:0,84,905	0/0:25,0:18:36.52:0,37,365	./.	./.	0/0:46,0:33:35.11:0,35,546	0/0:43,0:37:66.20:0,66,726	0/0:36,0:21:42.48:0,42,462	./.	0/0:58,0:44:96.92:0,97,1069	0/0:85,0:51:99:0,133,1498	0/0:53,0:42:85.58:0,86,895	0/0:46,0:41:88.50:0,88,1008	0/0:42,0:40:73.98:0,74,844	0/0:40,0:34:61.40:0,61,700	0/0:50,0:40:73.13:0,73,830	0/0:48,0:40:78.24:0,78,909	0/0:61,0:55:90.15:0,90,981	0/0:39,0:33:65.77:0,66,690	0/1:10,3:8:8.59:82,0,9	0/1:23,11:21:99:257,0,183	0/1:14,7:20:90.30:272,0,90	0/0:56,0:40:93.37:0,93,1055	0/0:68,0:55:99:0,115,1299	0/0:60,0:56:96.13:0,96,1045	0/0:48,0:39:80.35:0,80,829	0/0:42,0:29:70.28:0,70,658	0/1:12,9:10:82.28:82,0,91	0/0:26,0:18:36.31:0,36,367
chr10	41886059	.	GAAAATTTATT	G	654.01	PASS	AB=0.925;AC=8;AF=0.174;AN=46;BaseQRankSum=5.443;DP=573;FS=0.000;HRun=0;HaplotypeScore=76.2132;InbreedingCoeff=-0.0975;MQ=31.69;MQ0=121;MQRankSum=-0.889;QD=3.59;ReadPosRankSum=1.814;VQSLOD=1.0594;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:14:3.01:0,3,164	0/0:5,0:4:9.03:0,9,441	./.	0/0:15,0:4:6.49:0,6,259	0/0:31,0:22:8.87:0,9,268	0/1:34,1:19:62.02:62,0,979	0/1:26,1:5:80.08:80,0,158	./.	0/0:32,0:23:36.12:0,36,1753	0/0:24,0:14:42.14:0,42,2216	0/0:21,0:15:9.03:0,9,416	0/0:31,0:26:39.13:0,39,2134	0/1:27,2:19:99:150,0,772	0/1:31,3:26:99:237,0,605	0/0:40,0:28:36.12:0,36,1770	0/0:23,0:18:18.06:0,18,947	0/1:21,3:11:73.55:74,0,432	1/1:13,1:7:2.90:16,3,0	0/0:16,0:3:9:0,9,248	./.	./.	0/0:17,0:8:3.01:0,3,164	0/0:22,0:17:9.03:0,9,457	0/0:25,0:13:9.03:0,9,382	0/0:19,0:10:6.02:0,6,255	0/1:6,2:7:99:157,0,563	0/0:4,0:1:3.01:0,3,164	./.
chr10	41888841	.	TACATCTGTTAA	T	8613.79	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=8.113;DP=604;FS=103.757;HRun=0;HaplotypeScore=216.2130;InbreedingCoeff=0.9707;MQ=79.06;MQ0=0;MQRankSum=-13.425;QD=59.82;ReadPosRankSum=1.497;VQSLOD=1.5417;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:87.30:0,87,4639	0/0:25,0:25:60.21:0,60,3334	0/0:16,0:16:48.16:0,48,2274	0/0:25,0:25:66.21:0,66,2727	0/0:28,0:28:84.29:0,84,4218	1/1:2,10:12:30.10:1037,30,0	1/1:5,13:18:24.08:831,24,0	0/0:40,0:40:99:0,108,5222	1/1:5,16:21:27.09:935,27,0	0/0:28,0:28:81.28:0,81,4527	0/0:19,0:19:54.19:0,54,2896	1/1:0,14:14:30.10:1039,30,0	1/1:3,14:18:36.12:1246,36,0	1/1:0,12:12:21.07:727,21,0	0/0:22,0:22:66.23:0,66,3486	0/0:24,0:24:63.22:0,63,3330	0/0:26,0:26:75.26:0,75,3722	0/0:21,0:22:51.18:0,51,2683	0/0:21,0:21:51.18:0,51,2315	0/0:25,0:25:69.19:0,69,3333	0/0:23,0:23:57.20:0,57,2836	1/1:1,17:18:48.16:1662,48,0	1/1:2,14:16:29.76:1038,30,0	1/1:5,10:15:3.01:98,3,0	0/0:31,0:31:87.30:0,87,4460	0/0:18,0:18:51.18:0,51,2562	0/0:26,0:26:72.25:0,72,3365	0/0:9,0:9:24.08:0,24,1183
chr10	41888894	.	TTA	T	7448.37	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=13.225;DP=640;FS=13.019;HRun=0;HaplotypeScore=127.6426;InbreedingCoeff=0.9994;MQ=84.21;MQ0=0;MQRankSum=-2.762;QD=40.48;ReadPosRankSum=1.634;VQSLOD=5.9106;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,108,2019	0/0:21,0:21:60.21:0,60,1157	0/0:26,0:26:66.23:0,66,1232	0/0:22,0:22:54.18:0,54,979	0/0:27,0:27:81.28:0,81,1541	0/0:14,0:14:39.12:0,39,719	0/0:17,0:17:42.14:0,42,778	1/1:4,34:38:99:1513,102,0	0/0:18,0:18:39.13:0,39,752	0/0:24,0:24:66.23:0,66,1252	0/0:20,0:20:57.20:0,57,1080	0/0:21,0:21:45.15:0,45,830	0/0:21,0:21:54.18:0,54,1017	0/0:17,0:17:27.09:0,27,501	0/0:26,0:26:75.24:0,75,1389	0/0:20,0:20:60.21:0,60,1158	0/0:25,0:25:72.25:0,72,1389	0/0:12,0:12:33.10:0,33,603	1/1:1,10:11:30.10:459,30,0	1/1:0,33:33:90.31:1377,90,0	1/1:1,30:31:69.23:1056,69,0	0/0:20,0:20:54.18:0,54,1009	0/0:28,0:28:72.25:0,72,1346	0/0:18,0:18:36.12:0,36,694	0/0:22,0:22:66.23:0,66,1219	1/1:1,27:28:26.30:1161,26,0	1/1:0,30:30:87.30:1331,87,0	1/1:0,13:13:36.12:551,36,0
chr10	41889217	.	CTCAATGAA	C	5834.65	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=13.682;DP=708;FS=4.090;HRun=0;HaplotypeScore=194.7876;InbreedingCoeff=0.9665;MQ=94.13;MQ0=0;MQRankSum=-12.757;QD=50.30;ReadPosRankSum=-0.737;VQSLOD=4.4318;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,144,6117	0/0:20,0:20:54.19:0,54,2266	0/0:32,0:32:75.26:0,75,3013	0/0:35,0:35:84.25:0,84,3021	0/0:29,0:29:81.26:0,81,3364	0/0:21,0:21:60.21:0,60,2421	0/0:33,0:33:90.31:0,90,3791	1/1:15,10:25:39.11:899,39,0	0/0:20,0:20:48.16:0,48,2067	0/0:28,0:28:78.27:0,78,3319	0/0:31,0:31:90.31:0,90,3843	0/0:31,0:31:81.28:0,81,3449	0/0:29,0:29:84.29:0,84,3553	0/0:23,0:23:66.23:0,66,2728	0/0:40,0:40:99:0,105,4548	0/0:17,0:17:45.15:0,45,1897	0/0:29,0:29:81.26:0,81,3401	0/0:17,0:17:51.18:0,51,2101	1/1:1,13:14:39.13:1060,39,0	1/1:3,8:11:21.07:573,21,0	1/1:7,12:19:24.06:553,24,0	0/0:31,0:31:81.28:0,81,3211	0/0:32,0:32:93.32:0,93,3842	0/0:19,0:19:51.18:0,51,2123	0/0:24,0:24:72.25:0,72,2898	1/1:8,21:29:69.24:1813,69,0	1/1:3,13:16:33.11:855,33,0	1/1:1,1:2:3.01:82,3,0
chr10	41889251	.	C	CTG	6312.11	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=0.224;DP=761;FS=0.356;HRun=0;HaplotypeScore=112.5685;InbreedingCoeff=0.9985;MQ=86.51;MQ0=1;MQRankSum=-10.118;QD=42.08;ReadPosRankSum=-3.961;VQSLOD=4.6469;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:61,0:61:99:0,181,2604	0/0:14,0:14:39.12:0,39,550	0/0:34,0:34:73.52:0,74,1068	0/0:19,0:19:40.64:0,41,620	0/0:29,0:29:84.23:0,84,1190	0/0:22,0:22:66.21:0,66,951	0/0:27,0:27:78.25:0,78,1127	1/1:5,27:34:93.15:1556,93,0	0/0:28,0:28:84.28:0,84,1234	0/0:28,0:28:81.27:0,81,1190	0/0:32,0:32:96.27:0,96,1350	0/0:29,0:29:84.28:0,84,1237	0/0:35,0:35:99:0,102,1479	0/0:26,0:26:72.23:0,72,1038	0/0:41,0:41:99:0,120,1764	0/0:24,0:24:72.24:0,72,1058	0/0:29,0:29:84.28:0,84,1237	0/0:17,0:17:48.16:0,48,701	1/1:7,9:16:42.02:660,42,0	1/1:0,18:20:48.16:897,48,0	1/1:0,25:26:51.17:953,51,0	0/0:38,0:38:99:0,108,1540	0/0:34,0:34:99:0,99,1457	0/0:18,0:18:51.17:0,51,747	0/0:26,0:26:78.24:0,78,1124	1/1:7,18:26:63.03:1013,63,0	1/1:3,19:21:48.16:898,48,0	1/1:0,6:6:18.06:336,18,0
chr10	41889568	.	TAA	T	4333.73	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=15.827;DP=655;FS=8.742;HRun=9;HaplotypeScore=102.4443;InbreedingCoeff=0.9671;MQ=80.45;MQ0=0;MQRankSum=-10.905;QD=29.89;ReadPosRankSum=-3.048;VQSLOD=3.6572;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:49:99:0,135,2028	0/0:10,0:10:30.10:0,30,492	0/0:22,0:23:49.91:0,50,699	0/0:18,0:18:38.48:0,38,662	0/0:28,0:28:78.27:0,78,1280	0/0:26,0:25:75.26:0,75,1224	0/0:15,0:15:39.12:0,39,606	1/1:2,20:22:55.92:662,56,0	0/0:19,0:19:51.16:0,51,814	0/0:30,0:30:80.97:0,81,1265	0/0:24,0:24:65.03:0,65,1039	0/0:27,0:27:75.24:0,75,1199	0/0:27,0:27:78.25:0,78,1255	0/0:22,0:22:63.22:0,63,1031	0/0:26,0:26:75.26:0,75,1231	0/0:25,0:25:72.23:0,72,1135	0/0:32,0:32:87.30:0,87,1428	0/0:5,0:5:3.01:0,3,49	1/1:5,18:23:60.16:689,60,0	1/1:4,19:23:66.10:728,66,0	1/1:6,11:18:36.03:399,36,0	0/0:31,0:31:90.31:0,90,1477	0/0:28,0:28:72.21:0,72,1142	0/0:24,0:25:62.69:0,63,963	0/0:20,0:20:60.17:0,60,897	1/1:5,16:21:54.12:610,54,0	1/1:4,27:31:90.25:1036,90,0	1/1:1,6:7:18.05:210,18,0
chr10	41889601	.	GTGA	G	6721.77	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=16.264;DP=692;FS=0.347;HRun=0;HaplotypeScore=111.6963;InbreedingCoeff=0.9992;MQ=75.79;MQ0=0;MQRankSum=-14.217;QD=43.09;ReadPosRankSum=-1.480;VQSLOD=5.5794;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,132,2968	0/0:14,0:14:42.14:0,42,934	0/0:20,0:20:60.08:0,60,1137	0/0:24,0:24:54.18:0,54,1151	0/0:29,0:29:87.30:0,87,1972	0/0:25,0:24:69.22:0,69,1520	0/0:11,0:11:30.10:0,30,649	1/1:7,26:33:75.26:1235,75,0	0/0:22,0:22:63.20:0,63,1344	0/0:46,0:46:99:0,132,2928	0/0:28,0:28:78.27:0,78,1698	0/0:26,0:26:78.25:0,78,1649	0/0:24,0:24:72.25:0,72,1614	0/0:21,0:21:60.21:0,60,1322	0/0:24,0:24:69.22:0,69,1479	0/0:27,0:27:75.26:0,75,1678	0/0:30,0:30:90.31:0,90,2036	0/0:10,0:10:27.09:0,27,612	1/1:1,16:17:48.16:799,48,0	1/1:1,23:24:63.21:1036,63,0	1/1:4,11:15:27.09:449,27,0	0/0:30,0:30:87.28:0,87,1909	0/0:29,0:29:84.29:0,84,1884	0/0:23,0:23:66.21:0,66,1414	0/0:28,0:28:84.27:0,84,1804	1/1:3,21:24:66.22:1056,66,0	1/1:0,35:35:99:1747,105,0	1/1:0,8:8:24.08:400,24,0
chr10	41891929	.	AATATATAT	A	3015.68	PASS	AB=0.858;AC=29;AF=0.580;AN=50;BaseQRankSum=4.913;DP=243;FS=1.745;HRun=0;HaplotypeScore=100.7031;InbreedingCoeff=0.0981;MQ=62.86;MQ0=1;MQRankSum=-5.219;QD=15.39;ReadPosRankSum=3.028;VQSLOD=2.5152;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,0:3:2.14:59,2,0	0/0:2,0:2:3.01:0,3,114	./.	0/0:13,0:7:2.60:0,3,13	0/1:5,0:8:6.34:45,0,6	1/1:6,6:11:21.05:456,21,0	1/1:7,0:7:17.99:180,18,0	0/1:27,0:27:27.23:27,0,49	1/1:8,3:11:24.02:351,24,0	0/0:10,0:10:11.92:0,12,91	0/1:10,0:15:87.35:87,0,95	1/1:4,2:6:9.03:194,9,0	0/1:6,0:6:10.45:84,0,10	1/1:6,2:8:15.03:267,15,0	0/0:4,0:4:2.92:0,3,17	0/0:5,0:5:2.49:0,2,5	1/1:13,4:17:30.07:482,30,0	./.	0/1:13,0:15:18.75:108,0,19	0/1:9,0:11:4:66,0,4	0/0:2,0:2:2.67:0,3,14	1/1:1,1:2:3.01:72,3,0	1/1:4,1:5:6:95,6,0	./.	0/1:5,0:7:14.50:99,0,15	0/1:9,0:14:34.43:238,0,34	1/1:12,0:17:6.03:254,6,0	0/1:5,0:5:0:0,0,0
chr10	41891950	.	GTATATATATA	G	2924.68	PASS	AB=0.800;AC=31;AF=0.861;AN=36;BaseQRankSum=2.378;DP=127;FS=10.172;HRun=0;HaplotypeScore=85.3385;InbreedingCoeff=0.2689;MQ=64.80;MQ0=5;MQRankSum=-3.129;QD=32.86;ReadPosRankSum=2.807;VQSLOD=2.3795;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:3,0:4:15.69:16,0,20	0/0:1,0:1:3.01:0,3,153	./.	0/0:17,0:7:2.93:0,3,34	1/1:3,0:4:3.48:63,3,0	1/1:4,6:9:18.06:509,18,0	1/1:3,0:3:5.75:47,6,0	./.	1/1:2,3:5:14.88:318,15,0	./.	1/1:5,0:5:6.02:138,6,0	1/1:1,2:3:6.02:170,6,0	./.	1/1:2,2:4:9.03:206,9,0	./.	./.	1/1:15,0:19:15.04:297,15,0	./.	1/1:9,0:9:8.86:153,9,0	1/1:3,0:3:6.02:110,6,0	./.	1/1:0,1:1:3.01:84,3,0	1/1:0,1:1:3.01:85,3,0	./.	1/1:3,0:3:6.02:138,6,0	1/1:7,0:7:15.05:348,15,0	1/1:8,0:8:15.05:349,15,0	./.
chr10	41891956	.	AT	A	222.08	PASS	AB=0.938;AC=24;AF=0.522;AN=46;BaseQRankSum=5.228;DP=120;FS=5.260;HRun=1;HaplotypeScore=63.8969;InbreedingCoeff=0.3407;MQ=69.22;MQ0=6;MQRankSum=-4.719;QD=3.17;ReadPosRankSum=5.465;VQSLOD=0.0694;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:3,0:3:4.33:0,4,25	0/0:2,0:2:5.99:0,6,70	./.	0/0:19,0:7:2.91:0,3,20	0/0:3,0:3:1.50:0,2,35	1/1:10,0:9:10.64:27,11,0	0/0:3,0:3:5.32:0,5,69	0/0:9,0:8:20.77:0,21,78	0/1:5,0:5:6.18:6,0,15	0/0:1,0:1:2.97:0,3,20	1/1:5,0:5:4.44:14,4,0	1/1:2,0:2:3.63:9,4,0	0/0:1,0:1:3.01:0,3,38	1/1:3,0:3:3.26:8,3,0	1/1:2,0:2:2.48:19,2,0	./.	0/1:12,6:18:4.11:208,0,4	./.	0/1:5,0:4:2.78:3,0,6	0/1:3,0:3:0.18:1,0,0	0/0:1,0:1:2.60:0,3,10	1/1:1,0:1:1.55:4,2,0	1/1:1,0:1:1.82:5,2,0	./.	1/1:2,0:2:4.44:14,4,0	1/1:6,0:6:8.01:21,8,0	1/1:7,0:6:1.94:15,2,0	./.
chr10	41891959	.	TATATATATATATATATA	T	5459.53	PASS	AB=1.000;AC=30;AF=0.625;AN=48;BaseQRankSum=2.832;DP=131;FS=1.972;HRun=0;HaplotypeScore=81.6079;InbreedingCoeff=0.4591;MQ=64.48;MQ0=6;MQRankSum=-1.436;QD=58.70;ReadPosRankSum=2.334;VQSLOD=4.2979;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:3,0:3:9.03:0,9,216	0/0:2,0:2:6.02:0,6,315	0/0:2,0:2:3.01:0,3,53	0/0:18,0:6:2.95:0,3,54	0/0:3,0:3:4.17:0,4,20	1/1:10,0:9:1.11:505,1,0	0/1:2,0:2:13.67:14,0,15	1/1:12,0:11:33.11:679,33,0	1/1:5,0:5:14.49:291,14,0	0/0:2,0:2:6.02:0,6,127	1/1:5,0:5:6.02:211,6,0	1/1:2,0:2:6.02:175,6,0	0/0:1,0:1:3.01:0,3,65	1/1:3,0:3:9.01:200,9,0	0/0:2,0:2:6.02:0,6,114	./.	0/1:20,0:20:99:328,0,205	./.	1/1:6,2:7:18.06:536,18,0	1/1:2,2:4:9.03:322,9,0	1/1:2,0:2:6.02:119,6,0	1/1:1,0:1:3.01:87,3,0	1/1:1,0:1:3.01:89,3,0	./.	1/1:2,0:2:6.02:212,6,0	1/1:2,5:7:21.07:849,21,0	1/1:4,5:7:21.07:843,21,0	./.
chr10	41891975	.	TA	T	1593.51	PASS	AC=12;AF=0.222;AN=54;BaseQRankSum=1.604;DP=164;FS=10.482;HRun=2;HaplotypeScore=60.2377;InbreedingCoeff=0.7144;MQ=67.93;MQ0=5;MQRankSum=0.730;QD=24.14;ReadPosRankSum=1.117;VQSLOD=2.3033;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:5:13.89:0,14,124	0/0:4,0:4:12.04:0,12,164	0/0:3,0:3:5.97:0,6,51	0/0:15,0:6:5.96:0,6,80	0/0:4,0:4:11.71:0,12,130	0/0:7,0:7:19.43:0,19,93	0/0:3,0:3:9.03:0,9,118	1/1:0,26:20:60.19:764,60,0	0/0:5,0:5:14.25:0,14,108	0/0:3,0:3:9.03:0,9,124	0/0:7,0:7:10.09:0,10,91	0/0:4,0:4:11.51:0,12,103	0/0:1,0:1:3.01:0,3,40	0/0:5,0:5:14.52:0,15,143	0/0:3,0:3:9.03:0,9,119	0/0:1,0:1:3.01:0,3,40	0/0:14,0:14:35.05:0,35,289	0/0:1,0:1:3.01:0,3,40	1/1:10,0:9:23.93:252,24,0	1/1:2,4:6:12.92:152,13,0	1/1:0,4:4:12.04:153,12,0	0/0:1,0:1:2.80:0,3,13	0/0:3,0:3:8.75:0,9,77	0/0:1,0:1:3.01:0,3,39	0/0:5,0:5:13.09:0,13,117	1/1:5,5:10:26.68:241,27,0	1/1:5,5:8:23.74:205,24,0	./.
chr10	41891976	.	A	AT	1453.72	PASS	AC=12;AF=0.222;AN=54;BaseQRankSum=1.477;DP=172;FS=10.482;HRun=1;HaplotypeScore=61.8432;InbreedingCoeff=0.7163;MQ=70.03;MQ0=5;MQRankSum=0.270;QD=21.70;ReadPosRankSum=1.012;VQSLOD=2.6155;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:5:15:0,15,163	0/0:4,0:4:12.04:0,12,162	0/0:3,0:3:5.97:0,6,51	0/0:16,0:7:6.01:0,6,75	0/0:5,0:5:12.03:0,12,145	0/0:7,0:7:20.96:0,21,176	0/0:4,0:4:9.03:0,9,119	1/1:27,0:21:60.19:764,60,0	0/0:5,0:5:15.02:0,15,155	0/0:3,0:3:9.03:0,9,120	0/0:7,0:7:11.95:0,12,120	0/0:5,0:5:12.02:0,12,132	0/0:1,0:1:3.01:0,3,40	0/0:6,0:6:15.03:0,15,172	0/0:3,0:3:9.03:0,9,120	0/0:2,0:2:3.01:0,3,40	0/0:14,0:14:35.89:0,36,341	0/0:1,0:1:3.01:0,3,40	1/1:2,8:9:21.17:245,21,0	1/1:6,0:6:12.04:158,12,0	1/1:4,0:4:12.04:153,12,0	0/0:2,0:2:3:0,3,26	0/0:3,0:3:9.01:0,9,91	0/0:1,0:1:3.01:0,3,40	0/0:5,0:5:14.95:0,15,146	1/1:10,0:10:19.50:171,20,0	1/1:10,0:8:16.80:135,17,0	./.
chr10	41892984	.	A	AAAGAAT	9067.16	PASS	AB=0.556;AC=13;AF=0.232;AN=56;BaseQRankSum=13.220;DP=522;FS=0.407;HRun=0;HaplotypeScore=119.7140;InbreedingCoeff=0.9032;MQ=81.32;MQ0=0;MQRankSum=-14.457;QD=83.96;ReadPosRankSum=2.103;VQSLOD=6.1522;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:60.21:0,60,1534	0/0:7,0:7:21.07:0,21,537	0/0:21,0:21:63.18:0,63,1428	0/0:13,0:13:30.10:0,30,732	0/0:28,0:28:84.29:0,84,2123	0/0:33,0:33:99:0,99,2515	0/0:19,0:19:57.20:0,57,1420	1/1:6,14:20:51.07:1476,51,0	0/0:21,0:21:63.19:0,63,1482	0/0:30,0:30:81.27:0,81,2018	0/0:24,0:24:72.25:0,72,1845	0/0:11,0:11:33.11:0,33,846	0/0:24,0:24:69.22:0,69,1648	0/0:25,0:25:75.26:0,75,1874	0/0:19,0:19:57.20:0,57,1461	0/0:18,0:18:48.16:0,48,1230	0/0:12,0:12:29.65:0,30,767	0/0:14,0:14:42.14:0,42,1005	1/1:0,3:5:11.87:306,12,0	1/1:1,23:24:72.25:2271,72,0	1/1:1,5:6:14.99:485,15,0	0/0:20,0:20:57.15:0,57,1457	0/0:27,0:27:78.27:0,78,1999	0/0:14,0:14:42.14:0,42,1076	0/0:13,0:13:39.13:0,39,985	0/1:5,20:25:7.85:1926,0,8	1/1:0,20:19:60.21:1924,60,0	1/1:1,7:8:21.07:679,21,0
chr10	41892985	.	C	CA	3139.25	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=16.458;DP=546;FS=2.750;HRun=1;HaplotypeScore=101.7659;InbreedingCoeff=0.9933;MQ=79.08;MQ0=0;MQRankSum=-14.580;QD=23.96;ReadPosRankSum=-0.284;VQSLOD=3.5531;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:60.19:0,60,772	0/0:7,0:7:21.07:0,21,272	0/0:21,0:21:57.07:0,57,701	0/0:12,0:12:15.09:0,15,295	0/0:28,0:28:84.26:0,84,1076	0/0:33,0:33:99:0,99,1286	0/0:19,0:19:57.19:0,57,740	1/1:16,14:31:78.09:768,78,0	0/0:20,0:20:60.18:0,60,762	0/0:31,0:31:87.27:0,87,1097	0/0:24,0:24:72.23:0,72,935	0/0:11,0:11:33.11:0,33,429	0/0:25,0:25:69.19:0,69,864	0/0:25,0:25:75.24:0,75,973	0/0:19,0:19:57.19:0,57,740	0/0:18,0:18:54.15:0,54,673	0/0:13,0:13:32.89:0,33,428	0/0:14,0:14:42.14:0,42,544	1/1:3,3:6:18.03:180,18,0	1/1:3,23:26:73.31:671,73,0	1/1:4,5:9:21.01:190,21,0	0/0:20,0:20:57.12:0,57,740	0/0:27,0:27:81.25:0,81,1037	0/0:14,0:14:42.14:0,42,545	0/0:13,0:13:39.13:0,39,505	1/1:8,20:28:39.09:666,39,0	1/1:3,20:22:69.09:658,69,0	1/1:1,7:8:21.03:204,21,0
chr10	41895217	.	TA	T	6232.08	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=7.150;DP=540;FS=0.354;HRun=1;HaplotypeScore=93.3324;InbreedingCoeff=0.9945;MQ=84.43;MQ0=0;MQRankSum=-3.817;QD=36.88;ReadPosRankSum=1.710;VQSLOD=5.1283;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:75.26:0,75,1197	0/0:7,0:7:21.05:0,21,311	0/0:31,0:30:87.05:0,87,1284	0/0:29,0:22:66.19:0,66,1007	0/0:24,0:24:72.25:0,72,1150	1/1:0,22:22:57.15:774,57,0	1/1:0,18:18:45.15:628,45,0	0/0:25,0:25:75.26:0,75,1199	1/1:0,15:15:45.15:629,45,0	0/0:21,0:21:63.21:0,63,1006	0/0:29,0:29:87.27:0,87,1343	1/1:0,15:15:39.13:545,39,0	1/1:0,17:17:51.03:661,51,0	1/1:0,18:18:48.16:671,48,0	0/0:13,0:13:39.11:0,39,597	0/0:19,0:19:51.17:0,51,815	0/0:19,0:18:54.14:0,54,811	0/0:12,0:12:36.12:0,36,561	0/0:18,0:18:51.17:0,51,815	0/0:16,0:16:48.16:0,48,767	0/0:11,0:11:33.11:0,33,524	1/1:0,23:23:60.16:817,60,0	1/1:0,26:26:72.20:984,72,0	1/1:0,15:15:39.53:523,40,0	0/0:15,0:15:45.10:0,45,646	0/0:27,0:27:81.27:0,81,1274	0/0:25,0:25:60.20:0,60,959	0/0:4,0:4:12.04:0,12,185
chr10	41895230	.	GGTGTTTGTGT	G	3826.19	PASS	AB=0.978;AC=18;AF=0.321;AN=56;BaseQRankSum=10.082;DP=533;FS=5.658;HRun=0;HaplotypeScore=185.9235;InbreedingCoeff=0.8106;MQ=73.45;MQ0=7;MQRankSum=-1.253;QD=22.12;ReadPosRankSum=5.073;VQSLOD=1.6854;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:56.99:0,57,1171	0/0:10,0:10:30.09:0,30,1105	0/0:35,0:26:74.97:0,75,755	0/0:32,0:20:40.18:0,40,466	0/0:28,0:28:68.24:0,68,1213	1/1:19,2:21:49.42:481,49,0	0/1:21,1:21:25.29:302,0,25	0/0:25,0:25:56.04:0,56,660	1/1:11,2:14:32.98:432,33,0	0/0:20,0:20:50.47:0,50,841	0/0:26,0:26:61.11:0,61,685	1/1:14,0:14:32.94:268,33,0	1/1:15,1:17:41.58:433,42,0	1/1:16,1:16:32.92:338,33,0	0/0:13,0:13:33.08:0,33,843	0/0:25,0:25:50.33:0,50,767	0/1:14,0:13:30.58:116,0,31	0/0:13,0:13:37.27:0,37,806	0/0:18,0:17:45.01:0,45,762	0/0:15,0:15:45.06:0,45,1039	0/0:18,0:18:48.11:0,48,1473	1/1:13,4:17:38.50:487,38,0	1/1:21,0:21:50.93:533,51,0	1/1:12,3:15:25.99:435,26,0	0/0:11,0:11:33:0,33,727	0/0:21,0:21:60.07:0,60,1172	0/0:26,0:26:63.12:0,63,1611	0/0:1,0:1:3.01:0,3,124
chr10	41895233	.	GTT	G	2786.92	PASS	AB=0.959;AC=25;AF=0.446;AN=56;BaseQRankSum=9.539;DP=549;FS=3.292;HRun=3;HaplotypeScore=116.4693;InbreedingCoeff=0.6741;MQ=71.01;MQ0=9;MQRankSum=-3.417;QD=11.02;ReadPosRankSum=2.597;VQSLOD=0.7535;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:33.20:0,33,505	0/1:14,0:14:19.26:19,0,305	0/0:34,0:25:74.97:0,75,755	0/0:30,0:19:40.18:0,40,446	0/0:28,0:28:65.10:0,65,579	1/1:21,0:21:50.67:386,51,0	1/1:22,0:21:34.94:289,35,0	0/0:26,0:25:58.93:0,59,604	1/1:14,0:14:29.93:240,30,0	0/0:21,0:21:27.60:0,28,420	0/1:20,7:27:0.29:0,0,425	1/1:14,0:14:32.94:269,33,0	1/1:17,0:17:41.58:305,42,0	1/1:15,0:14:32.90:264,33,0	0/0:12,0:12:18.64:0,19,260	0/0:25,0:25:50.17:0,50,460	1/1:14,0:13:29.85:228,30,0	0/1:15,0:15:18.53:19,0,132	0/1:23,0:21:22.62:23,0,314	0/0:17,0:17:45.79:0,46,446	0/0:20,0:20:26.31:0,26,369	1/1:17,0:17:41.77:324,42,0	1/1:22,0:21:46.08:398,46,0	1/1:16,0:16:27.49:220,27,0	0/0:12,0:12:12:0,12,270	0/0:23,0:23:19.27:0,19,546	0/0:27,0:27:63.06:0,63,662	0/1:2,0:2:11.76:16,0,12
chr10	41895235	.	T	TTG	435.38	PASS	AB=0.951;AC=19;AF=0.396;AN=48;BaseQRankSum=-3.112;DP=573;FS=1.129;HRun=0;HaplotypeScore=137.5911;InbreedingCoeff=-0.0132;MQ=68.35;MQ0=11;MQRankSum=1.704;QD=1.45;ReadPosRankSum=-4.494;VQSLOD=1.0875;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:24:10.70:39,0,11	0/0:14,0:14:6.53:0,7,46	./.	./.	1/1:24,7:31:3.01:44,3,0	0/0:22,0:22:2.84:0,3,14	0/1:22,0:21:8.08:14,0,8	1/1:30,0:29:5.55:26,6,0	0/0:15,0:15:5.63:0,6,28	1/1:19,0:19:0.47:1,0,0	0/0:28,0:28:5.02:0,5,19	./.	0/0:16,0:16:5.68:0,6,27	0/0:15,0:14:2.84:0,3,14	0/1:11,0:12:8.15:14,0,8	1/1:18,9:28:3.01:44,3,0	./.	0/1:10,0:15:6.44:6,0,52	0/1:21,0:19:37.90:64,0,38	0/1:16,4:20:6.26:68,0,6	0/1:18,0:19:3.41:75,0,3	0/0:17,0:17:5.68:0,6,28	0/0:22,0:21:5.59:0,6,26	0/0:18,0:18:1.36:0,1,32	0/0:13,0:13:0.88:0,1,2	0/1:26,0:26:12.62:31,0,13	0/1:22,8:31:51.91:76,0,52	1/1:2,0:2:5.99:66,6,0
chr10	41896024	.	AC	A	6065.59	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=13.323;DP=636;FS=0.000;HRun=2;HaplotypeScore=61.3502;InbreedingCoeff=0.9987;MQ=81.22;MQ0=0;MQRankSum=-3.718;QD=35.06;ReadPosRankSum=-0.766;VQSLOD=4.7832;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:57.18:0,57,832	0/0:17,0:17:51.17:0,51,763	0/0:20,0:20:54.11:0,54,778	0/0:15,0:15:24.95:0,25,517	0/0:25,0:25:72.24:0,72,1076	0/0:25,0:25:75.25:0,75,1118	0/0:23,0:23:66.22:0,66,988	1/1:0,27:27:81.21:995,81,0	0/0:13,0:13:36.10:0,36,518	0/0:29,0:29:87.26:0,87,1244	0/0:22,0:22:66.21:0,66,962	0/0:18,0:18:54.18:0,54,806	0/0:21,0:21:63.19:0,63,904	0/0:24,0:24:69.23:0,69,1033	0/0:32,0:32:96.32:0,96,1420	0/0:32,0:32:96.28:0,96,1378	0/0:22,0:22:66.21:0,66,964	0/0:17,0:17:51.17:0,51,762	1/1:2,29:31:87.20:1043,87,0	1/1:1,34:35:87.18:1088,87,0	1/1:0,9:9:27.09:350,27,0	0/0:27,0:27:78.25:0,78,1141	0/0:26,1:27:36.28:0,36,994	0/0:9,0:9:24.08:0,24,359	0/0:26,0:26:78.26:0,78,1166	1/1:0,25:25:75.22:956,75,0	1/1:0,36:36:99:1323,102,0	1/1:0,10:10:24.08:311,24,0
chr10	41897001	.	G	GA	48.01	PASS	AB=0.700;AC=1;AF=0.019;AN=54;BaseQRankSum=1.774;DP=742;FS=5.143;HRun=1;HaplotypeScore=92.6734;InbreedingCoeff=-0.0175;MQ=51.66;MQ0=27;MQRankSum=-2.972;QD=6.86;ReadPosRankSum=-2.142;VQSLOD=-0.1356;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:57:99:0,135,1718	0/0:8,0:8:24.08:0,24,310	0/0:58,0:10:26.94:0,27,301	0/0:47,1:3:9.03:0,9,108	0/0:33,0:33:63.12:0,63,781	0/0:23,0:23:45.09:0,45,550	0/0:30,1:30:57.15:0,57,720	0/1:4,3:5:26.77:122,0,27	0/0:27,0:27:60.17:0,60,752	0/0:26,0:24:72.22:0,72,911	0/0:31,0:31:69.70:0,70,896	0/0:23,0:23:48.12:0,48,581	0/0:25,0:25:63.20:0,63,817	0/0:27,0:27:60.04:0,60,767	0/0:36,0:36:75.06:0,75,916	0/0:19,0:19:47.97:0,48,610	0/0:31,0:27:54.16:0,54,684	0/0:23,0:23:57.17:0,57,737	0/0:14,0:11:24.08:0,24,311	0/0:26,0:26:72.17:0,72,896	0/0:26,1:23:27.16:0,27,526	0/0:25,0:25:60.19:0,60,778	0/0:25,0:24:66.19:0,66,826	0/0:26,0:26:51.09:0,51,645	0/0:19,0:19:54.18:0,54,700	0/0:29,0:28:81.22:0,81,1030	0/0:16,0:16:42.03:0,42,503	./.
chr10	41897684	.	TAC	T	3178.76	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-4.340;DP=632;FS=0.448;HRun=0;HaplotypeScore=147.5789;InbreedingCoeff=0.9891;MQ=65.81;MQ0=4;MQRankSum=3.400;QD=35.32;ReadPosRankSum=1.704;VQSLOD=5.3240;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,38:40:99:1560,102,0	0/0:13,0:13:39.13:0,39,741	0/0:27,0:22:13.82:0,14,808	0/0:15,0:12:26.45:0,26,429	1/1:1,19:19:42.14:614,42,0	0/0:23,0:21:57.17:0,57,1059	0/0:15,0:14:36.12:0,36,693	0/0:17,0:14:36.09:0,36,602	0/0:22,0:21:60.19:0,60,1124	0/0:19,0:19:57.17:0,57,1035	0/0:11,0:11:33.10:0,33,603	0/0:23,0:21:63.21:0,63,1181	0/0:19,0:19:51.15:0,51,947	0/0:25,0:23:69.24:0,69,1331	0/0:24,0:24:72.25:0,72,1389	1/1:1,29:30:75.25:1148,75,0	0/0:22,0:22:63.19:0,63,1168	0/0:36,0:36:99:0,105,1902	0/0:22,0:22:63.20:0,63,1172	0/0:41,0:38:99:0,102,1921	0/0:23,0:23:60.21:0,60,1152	0/0:12,0:12:36.12:0,36,690	0/0:21,0:20:54.19:0,54,1039	0/0:16,0:16:42.14:0,42,811	0/0:21,0:21:57.18:0,57,1047	0/0:31,0:31:78.26:0,78,1453	0/0:33,0:29:87.28:0,87,1631	0/0:6,0:6:18.06:0,18,347
chr10	41898011	.	AGGGGAG	A	3864.92	PASS	AC=14;AF=0.259;AN=54;BaseQRankSum=3.957;DP=389;FS=13.940;HRun=0;HaplotypeScore=94.5126;InbreedingCoeff=0.8994;MQ=47.67;MQ0=31;MQRankSum=-10.558;QD=33.61;ReadPosRankSum=0.598;VQSLOD=2.4436;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:24:48.16:0,48,1542	0/0:4,0:3:6.02:0,6,206	0/0:9,0:4:2.90:0,3,16	./.	0/0:13,0:11:18.06:0,18,618	0/0:11,0:11:15.05:0,15,487	0/0:13,0:12:33.11:0,33,978	1/1:3,8:10:24.08:481,24,0	0/0:17,0:17:42.22:0,42,1252	0/0:10,0:8:24.08:0,24,822	0/0:5,0:5:12.04:0,12,404	0/0:14,0:13:27.09:0,27,798	0/0:15,0:15:33.11:0,33,993	0/0:16,0:14:30.10:0,30,950	0/0:13,0:13:26.97:0,27,838	0/0:15,0:14:36.12:0,36,1150	0/0:22,0:22:48.16:0,48,1501	0/0:18,0:17:39.13:0,39,1275	1/1:5,11:13:32.99:553,33,0	1/1:4,18:19:33.11:730,33,0	1/1:6,9:13:7.60:122,8,0	0/0:14,0:11:30.09:0,30,935	0/0:15,0:14:36.07:0,36,1046	0/0:4,0:4:12.04:0,12,333	0/0:15,0:12:33.11:0,33,1034	1/1:5,13:16:39.13:859,39,0	1/1:5,23:27:45.18:988,45,0	1/1:2,2:3:6.02:133,6,0
chr10	41898121	.	A	AAG	5912.60	PASS	AB=0.794;AC=32;AF=0.571;AN=56;BaseQRankSum=13.151;DP=485;FS=1.167;HRun=0;HaplotypeScore=90.3021;InbreedingCoeff=0.8433;MQ=78.41;MQ0=1;MQRankSum=-2.543;QD=21.42;ReadPosRankSum=-2.277;VQSLOD=4.8005;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:78.22:0,78,1121	0/0:14,0:14:39.11:0,39,574	0/0:19,0:17:39.60:0,40,558	0/0:15,0:13:23.26:0,23,295	0/0:23,0:23:69.22:0,69,1035	1/1:7,0:7:15.56:53,16,0	1/1:9,0:10:22.31:116,22,0	1/1:5,28:32:86.34:1324,86,0	1/1:17,0:17:34.91:120,35,0	0/0:15,0:15:45.15:0,45,671	0/0:22,0:22:63.20:0,63,943	1/1:19,0:19:9.52:119,10,0	1/1:19,0:19:39.98:149,40,0	1/1:17,0:17:29.39:127,29,0	0/0:17,0:17:51.17:0,51,780	0/0:18,0:18:54.17:0,54,807	1/1:18,0:18:28.88:148,29,0	0/0:9,0:9:21.07:0,21,322	1/1:4,8:14:32.78:492,33,0	1/1:4,20:23:57.05:926,57,0	1/1:0,7:7:15.05:286,15,0	0/1:10,0:10:1.94:28,0,2	1/1:16,0:15:23.59:96,24,0	1/1:11,0:11:4.82:44,5,0	0/0:28,0:28:74.30:0,74,1230	0/1:9,21:30:64.90:961,0,65	1/1:5,13:19:44.95:753,45,0	1/1:1,3:4:9.03:173,9,0
chr10	41898486	.	C	CGGGAAG	21677.70	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=14.855;DP=437;FS=3.191;HRun=0;HaplotypeScore=158.2351;InbreedingCoeff=0.9694;MQ=102.27;MQ0=0;MQRankSum=-15.579;QD=80.59;ReadPosRankSum=3.898;VQSLOD=6.1817;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,132,3154	0/0:9,0:9:27.07:0,27,636	0/0:36,0:36:69.73:0,70,2105	0/0:24,0:24:57.19:0,57,1591	0/0:32,0:32:87.30:0,87,2230	1/1:0,10:13:33.11:995,33,0	1/1:1,7:8:24.05:662,24,0	1/1:1,11:14:38.91:1088,39,0	1/1:0,10:11:33.11:991,33,0	1/1:1,6:7:21.07:592,21,0	1/1:2,12:15:38.69:1098,39,0	1/1:3,11:14:40.38:1130,40,0	1/1:5,21:26:75.03:2108,75,0	1/1:4,10:14:38.71:1057,39,0	1/1:2,24:26:78.02:2219,78,0	0/0:23,0:23:69.22:0,69,1686	1/1:3,7:10:27.04:744,27,0	1/1:2,1:3:9.03:217,9,0	1/1:0,7:7:21.07:633,21,0	1/1:0,17:17:51.18:1536,51,0	1/1:3,4:7:14.96:317,15,0	1/1:1,13:15:42.14:1266,42,0	1/1:2,12:14:33.06:982,33,0	1/1:1,5:6:12.04:361,12,0	1/1:0,18:18:54.19:1649,54,0	1/1:2,10:12:36.12:1033,36,0	1/1:0,7:7:21.07:633,21,0	1/1:0,4:4:12.04:368,12,0
chr10	41898487	.	T	TTGC	16561.33	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=17.531;DP=540;FS=4.082;HRun=0;HaplotypeScore=222.3671;InbreedingCoeff=0.9950;MQ=93.51;MQ0=0;MQRankSum=-16.918;QD=44.52;ReadPosRankSum=1.647;VQSLOD=5.4429;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,126,2295	0/0:8,0:8:24.08:0,24,447	0/0:35,0:35:97.85:0,98,1600	0/0:26,0:26:67.87:0,68,1167	0/0:32,0:32:96.28:0,96,1695	1/1:6,10:16:45.08:670,45,0	1/1:4,7:11:33.09:554,33,0	1/1:12,11:23:60.19:1006,60,0	1/1:1,10:11:33.11:555,33,0	1/1:9,6:15:39.09:599,39,0	1/1:9,12:22:54.18:873,54,0	1/1:8,11:19:54.14:886,54,0	1/1:5,21:27:81.24:1395,81,0	1/1:9,10:19:57.14:927,57,0	1/1:7,24:31:93.30:1557,93,0	0/0:24,0:24:69.24:0,69,1268	1/1:7,7:13:25.25:439,25,0	1/1:5,1:6:18:246,18,0	1/1:5,7:12:36.07:557,36,0	1/1:7,17:24:72.24:1145,72,0	1/1:8,4:11:23.94:359,24,0	1/1:9,14:23:60.20:1033,60,0	1/1:3,12:15:39.11:617,39,0	1/1:5,5:10:24.08:385,24,0	1/1:9,18:27:75.15:1208,75,0	1/1:7,10:17:42.12:662,42,0	1/1:5,7:12:36.12:591,36,0	1/1:2,4:6:18.06:296,18,0
chr10	41900304	.	C	CTT	17282.31	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=4.939;DP=590;FS=3.089;HRun=1;HaplotypeScore=117.4972;InbreedingCoeff=0.9972;MQ=74.78;MQ0=0;MQRankSum=-5.115;QD=52.37;ReadPosRankSum=2.747;VQSLOD=4.9643;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:87.28:0,87,1388	0/0:12,0:12:36.12:0,36,587	0/0:10,0:10:25.14:0,25,285	0/0:16,0:15:35.37:0,35,444	0/0:17,0:17:51.17:0,51,831	1/1:0,22:22:63.22:1278,63,0	1/1:1,24:26:66.18:1276,66,0	0/0:26,0:26:72.22:0,72,1107	1/1:0,19:20:45.15:913,45,0	1/1:1,23:25:66.20:1267,66,0	1/1:1,14:16:39.09:747,39,0	1/1:0,20:20:53.96:1095,54,0	1/1:1,28:29:81.28:1644,81,0	1/1:0,19:20:51.18:1035,51,0	1/1:1,36:38:99:2132,105,0	0/0:36,1:37:47.44:0,47,1651	1/1:0,19:20:57.15:1088,57,0	1/1:0,11:11:24.08:487,24,0	0/0:13,0:13:39.12:0,39,608	0/0:15,0:15:42.13:0,42,661	0/0:27,0:27:81.25:0,81,1271	1/1:0,15:16:45.07:831,45,0	1/1:0,23:23:69.11:1277,69,0	1/1:0,22:23:57.15:1116,57,0	1/1:0,20:20:60.08:1095,60,0	0/0:27,0:27:78.26:0,78,1251	0/0:26,0:26:75.22:0,75,1171	0/0:5,0:5:15.01:0,15,194
chr10	41901408	.	C	CCTCTCTAACT	36767.22	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-2.767;DP=623;FS=0.000;HRun=0;HaplotypeScore=197.2402;InbreedingCoeff=0.9996;MQ=87.19;MQ0=0;MQRankSum=-19.750;QD=107.82;ReadPosRankSum=-1.554;VQSLOD=4.6107;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,108,3389	0/0:10,0:10:27.09:0,27,871	0/0:34,0:33:83.95:0,84,2441	0/0:24,0:24:46.39:0,46,1351	0/0:16,0:16:48.16:0,48,1431	1/1:13,19:32:81.27:3632,81,0	1/1:14,7:21:48.16:1677,48,0	0/0:30,0:30:81.27:0,81,2327	1/1:7,17:25:63.22:3256,63,0	1/1:12,5:17:48.16:2246,48,0	1/1:12,8:20:51.17:1976,51,0	1/1:10,15:25:60.20:2647,60,0	1/1:9,24:35:96.33:4680,96,0	1/1:7,12:19:54.18:2573,54,0	1/1:9,16:27:69.23:2903,69,0	0/0:18,0:18:51.18:0,51,1579	1/1:7,15:24:51.17:2381,51,0	1/1:10,6:16:39.13:1655,39,0	0/0:13,0:13:33.11:0,33,1012	0/0:16,0:16:42.14:0,42,1309	0/0:23,0:23:57.20:0,57,1792	1/1:8,10:18:51.17:1627,51,0	1/1:11,14:26:63.14:2649,63,0	1/1:10,8:18:30.10:989,30,0	1/1:6,11:18:45.15:1877,45,0	0/0:35,0:35:93.31:0,93,2840	0/0:15,0:15:42.14:0,42,1353	0/0:10,0:10:27.09:0,27,874
chr10	41901413	.	C	CTA	4674.40	PASS	AB=0.976;AC=27;AF=0.482;AN=56;BaseQRankSum=17.647;DP=559;FS=6.575;HRun=0;HaplotypeScore=185.9456;InbreedingCoeff=0.7490;MQ=91.86;MQ0=0;MQRankSum=-17.370;QD=16.63;ReadPosRankSum=4.984;VQSLOD=4.4359;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,114,1805	0/0:9,0:9:27.09:0,27,440	0/0:37,0:36:98.04:0,98,1462	0/0:23,0:23:57.38:0,57,767	0/0:18,0:18:51.16:0,51,807	1/1:27,0:27:40.95:467,41,0	1/1:14,0:14:17.97:152,18,0	0/0:27,0:27:81.27:0,81,1297	1/1:22,0:22:19.95:381,20,0	0/1:12,0:12:86.12:86,0,111	1/1:17,0:17:2.11:211,2,0	1/1:19,0:19:38.93:321,39,0	1/1:29,0:29:58.84:586,59,0	1/1:17,2:19:41.94:384,42,0	0/1:24,0:24:29:352,0,29	0/0:18,0:18:51.04:0,51,831	1/1:17,0:17:20.94:349,21,0	0/1:12,1:13:29.97:182,0,30	0/0:12,0:12:36.08:0,36,529	0/0:16,0:16:48.14:0,48,732	0/0:21,0:21:57.19:0,57,929	1/1:16,0:16:29.99:349,30,0	1/1:21,0:21:41.94:360,42,0	1/1:16,1:17:18.88:189,19,0	1/1:14,0:14:11.01:304,11,0	0/0:33,0:33:99:0,99,1547	0/0:15,0:15:45.14:0,45,705	0/0:9,0:9:27.09:0,27,440
chr10	41901462	.	TG	T	1187.94	PASS	AB=0.952;AC=48;AF=0.889;AN=54;BaseQRankSum=1.691;DP=431;FS=2.196;HRun=11;HaplotypeScore=124.5430;InbreedingCoeff=0.2249;MQ=76.57;MQ0=0;MQRankSum=-4.305;QD=2.82;ReadPosRankSum=3.840;VQSLOD=0.1423;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:14,12:26:26.76:221,27,0	0/0:4,0:4:3.01:0,3,32	0/1:16,3:19:8.85:9,0,80	0/1:16,1:17:19.62:20,0,105	1/1:5,5:11:14.01:104,14,0	1/1:19,0:19:22.39:65,22,0	1/1:18,0:18:13.99:41,14,0	1/1:14,0:14:2.77:8,3,0	1/1:12,0:12:20.37:59,20,0	1/1:17,0:17:11.14:31,11,0	0/1:8,0:8:0:0,0,0	1/1:19,0:19:26.46:77,26,0	1/1:23,0:23:28.51:83,29,0	1/1:16,0:16:20.36:59,20,0	1/1:21,0:21:15.94:59,16,0	1/1:3,16:20:12.23:251,12,0	1/1:10,0:10:14.53:43,15,0	0/1:18,0:18:12.53:13,0,19	1/1:15,0:15:4.90:13,5,0	1/1:12,0:12:1.55:4,2,0	1/1:19,0:19:2.78:8,3,0	1/1:12,0:12:14.26:41,14,0	1/1:18,0:18:6.08:18,6,0	1/1:15,0:15:6.35:27,6,0	1/1:13,0:13:7.77:21,8,0	1/1:21,0:21:7.14:20,7,0	1/1:9,0:9:4.35:11,4,0	./.
chr10	41901468	.	GGGGGGC	G	5815.48	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=0.605;DP=399;FS=3.697;HRun=0;HaplotypeScore=121.5917;InbreedingCoeff=0.4534;MQ=76.30;MQ0=0;MQRankSum=-9.206;QD=22.03;ReadPosRankSum=5.158;VQSLOD=4.4534;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:47.95:0,48,1001	0/0:3,0:3:9.03:0,9,262	0/0:18,0:18:33.07:0,33,727	0/0:15,0:15:34.23:0,34,669	0/0:11,0:11:24.08:0,24,526	1/1:8,12:20:42.01:764,42,0	1/1:10,7:17:26.91:450,27,0	0/1:13,0:13:5.98:17,0,6	1/1:2,10:12:14.36:616,14,0	0/1:15,0:15:17.83:30,0,18	1/1:8,0:8:5.54:44,6,0	1/1:3,16:19:45.08:906,45,0	1/1:2,15:17:42.12:889,42,0	1/1:2,15:17:33.05:655,33,0	0/1:18,0:18:12.31:12,0,29	0/0:21,0:21:46.02:0,46,1024	1/1:12,0:12:28.97:225,29,0	0/1:14,0:14:9.91:10,0,47	0/1:15,0:15:30.04:30,0,49	0/1:8,0:8:11.48:17,0,11	0/0:15,0:15:3.11:0,3,33	1/1:0,11:11:24.04:456,24,0	1/1:5,10:15:12.47:211,12,0	1/1:1,15:16:23.16:419,23,0	0/1:17,0:17:30.01:65,0,30	0/0:13,0:13:6.46:0,6,86	0/0:11,0:11:17.86:0,18,147	0/0:7,0:7:8.16:0,8,84
chr10	41901469	.	GGGGGC	G	5187.83	PASS	AB=1.000;AC=40;AF=0.714;AN=56;BaseQRankSum=4.276;DP=401;FS=1.760;HRun=0;HaplotypeScore=118.0006;InbreedingCoeff=0.6131;MQ=76.43;MQ0=0;MQRankSum=-9.249;QD=16.79;ReadPosRankSum=1.682;VQSLOD=4.7533;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:53.74:0,54,838	0/0:3,0:3:9.03:0,9,221	0/0:18,0:18:30.08:0,30,598	0/0:15,0:15:25.45:0,25,520	0/0:12,0:12:27.07:0,27,441	1/1:18,0:18:42.02:477,42,0	1/1:15,1:16:27:327,27,0	1/1:12,0:12:12.37:93,12,0	1/1:12,0:12:33.55:398,34,0	1/1:14,1:15:30.71:231,31,0	1/1:8,0:8:8.95:70,9,0	1/1:20,0:20:48.09:569,48,0	1/1:17,0:17:45.12:550,45,0	1/1:17,0:17:33.05:394,33,0	1/1:18,0:18:37.57:259,38,0	0/0:21,0:21:46.06:0,46,811	1/1:4,9:13:38.96:560,39,0	0/1:14,0:14:11.09:90,0,11	1/1:16,0:16:16.18:107,16,0	1/1:8,0:8:5.92:39,6,0	1/1:16,0:16:2.92:19,3,0	1/1:11,0:11:24.03:274,24,0	1/1:15,0:15:11.99:132,12,0	1/1:16,0:16:23.80:263,24,0	1/1:16,1:17:31.49:218,31,0	0/1:11,0:11:2.69:67,0,3	0/1:12,0:12:21.67:33,0,22	0/1:7,0:7:17.44:17,0,24
chr10	41901470	.	GGGGC	G	6212.04	PASS	AB=1.000;AC=45;AF=0.804;AN=56;BaseQRankSum=2.063;DP=394;FS=7.292;HRun=0;HaplotypeScore=106.7086;InbreedingCoeff=0.8265;MQ=77.78;MQ0=0;MQRankSum=-8.087;QD=19.66;ReadPosRankSum=0.653;VQSLOD=3.6853;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:56.48:0,56,661	0/0:3,0:3:9.03:0,9,182	0/0:18,0:18:27.04:0,27,475	0/1:16,0:16:6.49:6,0,444	0/0:12,0:12:27.02:0,27,336	1/1:18,0:18:42.01:413,42,0	1/1:16,0:16:27.02:268,27,0	1/1:11,1:12:17.86:167,18,0	1/1:12,0:12:36.06:364,36,0	1/1:9,5:14:36.05:482,36,0	1/1:5,3:8:8.95:70,9,0	1/1:19,0:19:48.07:487,48,0	1/1:17,0:17:45.11:467,45,0	1/1:17,0:17:33.04:335,33,0	1/1:9,9:18:41.90:534,42,0	0/0:21,0:21:46.17:0,46,622	1/1:13,0:13:38.94:363,39,0	1/1:1,13:14:18.06:302,18,0	1/1:9,3:12:29.79:276,30,0	1/1:2,5:7:8.94:90,9,0	1/1:15,1:16:5.89:65,6,0	1/1:11,0:11:24.01:233,24,0	1/1:14,0:14:11.97:114,12,0	1/1:16,0:16:23.96:229,24,0	1/1:12,5:17:39.01:453,39,0	1/1:8,3:11:24.21:253,24,0	1/1:11,1:12:21.70:185,22,0	1/1:6,0:6:8.13:57,8,0
chr10	41901471	.	GGGC	G	5341.45	PASS	AB=1.000;AC=45;AF=0.804;AN=56;BaseQRankSum=3.071;DP=376;FS=8.314;HRun=0;HaplotypeScore=95.6136;InbreedingCoeff=0.7926;MQ=77.26;MQ0=0;MQRankSum=-7.763;QD=17.86;ReadPosRankSum=-0.036;VQSLOD=3.8913;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:51.50:0,52,447	0/0:3,0:3:9.03:0,9,145	0/0:17,0:17:25.85:0,26,379	0/1:15,0:15:7.91:8,0,357	0/0:12,0:12:26.37:0,26,234	1/1:15,0:15:41.92:347,42,0	1/1:10,0:10:29.96:251,30,0	1/1:11,2:13:20.99:201,21,0	1/1:14,0:14:41.95:351,42,0	1/1:14,0:14:35.97:314,36,0	1/1:8,0:8:8.95:70,9,0	1/1:18,0:18:47.95:403,48,0	1/1:16,0:16:44.99:384,45,0	1/1:15,0:15:32.96:276,33,0	1/1:17,0:17:41.49:347,41,0	0/0:21,0:21:45.41:0,45,439	1/1:14,0:14:41.88:342,42,0	1/1:14,0:14:1.54:144,2,0	1/1:9,3:12:29.90:260,30,0	1/1:7,0:7:8.94:67,9,0	1/1:5,10:15:6.01:73,6,0	1/1:11,0:11:23.91:191,24,0	1/1:11,0:11:11.96:96,12,0	1/1:15,0:15:23.93:193,24,0	1/1:16,1:17:38.96:338,39,0	1/1:7,3:10:26.98:269,27,0	1/1:11,2:13:32.96:316,33,0	1/1:5,0:5:12:103,12,0
chr10	41902835	.	AAC	A	1159.72	PASS	AB=0.770;AC=25;AF=0.521;AN=48;BaseQRankSum=-2.444;DP=565;FS=0.000;HRun=0;HaplotypeScore=102.1256;InbreedingCoeff=0.4935;MQ=54.68;MQ0=28;MQRankSum=0.773;QD=4.36;ReadPosRankSum=0.810;VQSLOD=2.7052;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:30:17.74:0,18,166	0/0:7,0:7:5.77:0,6,89	./.	./.	0/0:18,0:25:9.83:0,10,65	1/1:13,8:22:11.86:112,12,0	1/1:14,6:20:11.69:131,12,0	1/1:17,0:18:5.68:28,6,0	1/1:13,0:14:9.02:98,9,0	0/0:14,0:16:14.33:0,14,104	0/0:15,0:21:8.66:0,9,63	1/1:12,0:14:14.66:113,15,0	0/1:15,6:20:3.57:115,0,4	1/1:8,4:12:11.24:117,11,0	0/0:20,0:30:5.83:0,6,51	0/0:11,0:21:8.67:0,9,60	0/1:16,7:23:14.84:146,0,15	0/0:14,0:20:27.44:0,27,253	0/1:7,0:7:0:0,0,0	1/1:17,1:29:13.43:64,13,0	./.	0/1:4,8:14:23.96:157,0,24	1/1:8,6:16:8.86:80,9,0	0/1:12,1:19:30.31:60,0,30	0/0:15,0:17:5.99:0,6,52	1/1:11,0:12:2.84:14,3,0	1/1:13,0:21:19.64:94,20,0	./.
chr10	41902904	.	T	TA	5156.90	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-3.451;DP=592;FS=5.841;HRun=4;HaplotypeScore=101.2854;InbreedingCoeff=0.9963;MQ=68.32;MQ0=2;MQRankSum=-1.010;QD=34.38;ReadPosRankSum=-0.621;VQSLOD=4.3686;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:18:48.04:0,48,511	0/0:17,0:17:51.15:0,51,578	0/0:14,0:14:37.91:0,38,401	0/0:23,0:23:53.13:0,53,556	0/0:32,0:32:87.22:0,87,965	0/0:20,0:19:42.10:0,42,466	0/0:11,0:11:33.07:0,33,362	1/1:2,27:29:75.20:982,75,0	0/0:18,0:18:54.13:0,54,592	0/0:20,0:20:57.07:0,57,603	0/0:14,0:14:36:0,36,408	0/0:21,0:21:60.17:0,60,679	0/0:20,0:20:48.13:0,48,544	0/0:17,0:17:48.12:0,48,532	0/0:25,0:24:51:0,51,564	0/0:20,0:21:53.17:0,53,574	0/0:31,0:30:84.19:0,84,927	0/0:21,0:21:57.16:0,57,645	1/1:1,13:13:39.08:510,39,0	1/1:2,30:32:90.30:1222,90,0	1/1:1,14:14:39.13:532,39,0	0/0:29,0:29:78.22:0,78,884	0/0:29,0:29:75.18:0,75,829	0/0:15,0:15:45.11:0,45,500	0/0:25,0:25:72.19:0,72,805	1/1:3,15:18:14.12:564,14,0	1/1:5,24:29:63.21:854,63,0	1/1:1,12:13:36.12:492,36,0
chr10	41903019	.	TA	T	4233.80	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=1.492;DP=593;FS=3.157;HRun=1;HaplotypeScore=127.5603;InbreedingCoeff=0.9696;MQ=44.05;MQ0=40;MQRankSum=-4.195;QD=32.07;ReadPosRankSum=-0.377;VQSLOD=4.4306;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,105,1589	0/0:14,0:14:42.13:0,42,634	0/0:45,0:6:13.23:0,13,133	0/0:30,0:2:5.98:0,6,49	0/0:23,0:23:69.18:0,69,1043	0/0:19,0:19:48.16:0,48,736	0/0:12,0:11:18.06:0,18,280	1/1:1,32:33:75.22:1023,75,0	0/0:15,0:15:42.07:0,42,627	0/0:29,0:27:75.20:0,75,1114	0/0:26,0:25:66.04:0,66,938	0/0:21,0:21:39.05:0,39,548	0/0:20,0:18:45.07:0,45,648	0/0:17,0:16:42.07:0,42,616	0/0:24,0:24:54.11:0,54,810	0/0:32,0:32:93.30:0,93,1428	0/0:14,0:13:30.07:0,30,436	0/0:8,0:8:21.03:0,21,301	1/1:0,12:9:24.55:335,25,0	1/1:0,20:20:51.07:665,51,0	1/1:0,9:9:18.06:251,18,0	0/0:30,0:30:84.19:0,84,1252	0/0:21,0:20:42.14:0,42,655	0/0:8,0:7:14.90:0,15,175	0/0:17,0:16:38.96:0,39,503	1/1:0,20:20:60.12:791,60,0	1/1:0,26:25:57.19:794,57,0	1/1:0,12:12:27.09:374,27,0
chr10	41903440	.	CTT	C	5762.52	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=8.710;DP=600;FS=0.000;HRun=3;HaplotypeScore=80.9408;InbreedingCoeff=0.9892;MQ=86.88;MQ0=1;MQRankSum=-1.524;QD=39.74;ReadPosRankSum=-0.243;VQSLOD=4.3047;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:63.17:0,63,1178	0/0:14,0:14:42.14:0,42,778	0/0:21,0:20:50.86:0,51,829	0/0:22,0:22:59.03:0,59,1077	0/0:23,0:23:69.20:0,69,1207	0/0:27,0:27:81.26:0,81,1493	0/0:13,0:13:36.11:0,36,649	1/1:0,36:36:99:1585,108,0	0/0:25,0:25:75.23:0,75,1347	0/0:19,0:19:57.19:0,57,1072	0/0:14,0:14:39.12:0,39,720	0/0:34,0:34:99:0,99,1855	0/0:29,0:29:87.28:0,87,1603	0/0:24,0:24:72.25:0,72,1375	0/0:25,0:25:75.25:0,75,1405	0/0:21,0:21:63.20:0,63,1156	0/0:23,0:23:69.24:0,69,1310	0/0:21,0:21:57.20:0,57,1088	1/1:1,10:11:30.10:449,30,0	1/1:0,17:17:39.13:595,39,0	1/1:1,24:25:63.21:964,63,0	0/0:23,0:23:66.23:0,66,1275	0/0:21,0:21:57.18:0,57,995	0/0:14,0:14:42.14:0,42,811	0/0:21,0:21:60.20:0,60,1128	1/1:0,20:20:57.15:841,57,0	1/1:1,31:32:78.26:1191,78,0	1/1:0,4:4:9.03:138,9,0
chr10	41903878	.	T	TCAAA	38289.87	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-3.036;DP=643;FS=0.000;HRun=0;HaplotypeScore=119.8911;InbreedingCoeff=0.9938;MQ=68.10;MQ0=0;MQRankSum=-7.908;QD=64.79;ReadPosRankSum=3.802;VQSLOD=6.8431;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,38:42:99:2668,105,0	0/0:11,0:11:33.08:0,33,553	0/0:26,0:24:50.87:0,51,858	0/0:15,0:15:39.11:0,39,646	1/1:2,22:24:66.22:1610,66,0	1/1:6,20:27:66.23:1648,66,0	1/1:6,21:29:81.28:2062,81,0	1/1:14,15:27:69.22:1663,69,0	1/1:6,8:14:30.10:794,30,0	1/1:3,26:30:81.28:2125,81,0	1/1:1,16:19:48.12:1178,48,0	1/1:3,23:26:69.23:1783,69,0	1/1:4,22:26:75.26:1950,75,0	1/1:5,16:23:54.19:1374,54,0	1/1:3,17:22:51.17:1296,51,0	1/1:3,16:19:48.16:1259,48,0	1/1:2,24:28:72.25:1920,72,0	1/1:4,12:17:30.10:799,30,0	1/1:7,10:16:42.12:1060,42,0	1/1:2,14:16:39.13:997,39,0	1/1:2,22:25:60.21:1534,60,0	1/1:7,25:32:87.30:2203,87,0	1/1:7,20:28:69.24:1678,69,0	1/1:1,18:19:48.16:1228,48,0	1/1:0,26:25:72.25:1919,72,0	1/1:2,17:21:57.18:1425,57,0	1/1:2,22:25:66.23:1716,66,0	1/1:0,5:5:15.05:400,15,0
chr10	41904171	.	T	TCCCAGTTA	10463.22	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-6.137;DP=480;FS=2.050;HRun=0;HaplotypeScore=125.9562;InbreedingCoeff=0.9868;MQ=88.65;MQ0=0;MQRankSum=-10.873;QD=99.65;ReadPosRankSum=0.176;VQSLOD=5.6240;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,102,2493	0/0:4,0:4:12.04:0,12,336	0/0:28,0:27:75.25:0,75,1803	0/0:23,0:22:15.56:0,16,941	0/0:22,0:22:63.22:0,63,1617	0/0:27,0:27:75.24:0,75,1918	0/0:15,0:15:39.09:0,39,955	1/1:9,10:24:60.19:2222,60,0	0/0:12,0:12:33.11:0,33,838	0/0:21,0:21:53.85:0,54,1413	0/0:18,0:18:48.16:0,48,1343	0/0:15,0:14:39.10:0,39,995	0/0:7,0:7:21.07:0,21,587	0/0:23,0:23:66.21:0,66,1779	0/0:15,0:15:42.14:0,42,1150	0/0:16,0:16:45.15:0,45,1228	1/1:10,9:18:54.13:2123,54,0	0/0:13,0:13:32.40:0,32,783	1/1:7,7:15:27.09:1041,27,0	1/1:3,10:14:39.13:1608,39,0	1/1:5,4:9:18.06:788,18,0	0/0:20,0:20:57.15:0,57,1426	0/0:23,0:23:54.19:0,54,1444	0/0:20,0:20:42.14:0,42,1124	0/0:14,0:14:39.13:0,39,1068	1/1:2,8:10:24.08:1037,24,0	1/1:2,7:9:24.08:986,24,0	1/1:0,5:5:15.05:658,15,0
chr10	41904222	.	AAAAC	A	1070.94	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=-0.288;DP=572;FS=2.159;HRun=0;HaplotypeScore=125.7478;InbreedingCoeff=0.2083;MQ=59.53;MQ0=25;MQRankSum=-1.464;QD=3.62;ReadPosRankSum=-1.331;VQSLOD=2.5221;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:33,0:32:54.03:284,54,0	0/0:7,0:7:21.05:0,21,426	0/0:74,0:17:20.69:0,21,254	0/1:88,0:30:17.19:17,0,351	1/1:3,12:15:26.92:434,27,0	0/0:14,0:14:21.21:0,21,107	0/0:18,0:18:6.80:0,7,36	0/1:21,0:20:36.14:36,0,176	0/0:12,0:12:17.43:0,17,67	0/0:22,0:22:21.17:0,21,201	0/0:16,0:16:34.45:0,34,247	0/0:14,0:14:17.86:0,18,129	0/0:8,0:8:9.74:0,10,26	0/0:16,0:16:11.73:0,12,213	0/0:15,0:15:9.34:0,9,59	1/1:9,2:11:25.58:233,26,0	1/1:15,0:15:5.24:85,5,0	0/0:15,0:15:23.24:0,23,158	0/1:10,0:10:43.22:52,0,43	0/1:10,0:9:24.33:24,0,68	0/1:9,0:9:2.70:3,0,57	0/1:17,0:16:31.72:32,0,80	0/1:23,0:23:13.68:14,0,228	0/0:20,0:20:12.61:0,13,192	0/0:13,0:13:17.83:0,18,131	0/1:26,0:26:12.24:12,0,224	0/1:18,0:18:20.37:20,0,88	0/0:12,0:12:32.17:0,32,220
chr10	41904223	.	AAAC	A	2615.46	PASS	AB=0.995;AC=27;AF=0.482;AN=56;BaseQRankSum=-3.137;DP=567;FS=13.061;HRun=0;HaplotypeScore=113.7032;InbreedingCoeff=0.1197;MQ=60.59;MQ0=25;MQRankSum=-1.019;QD=6.52;ReadPosRankSum=-1.090;VQSLOD=2.0204;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,32:33:52.49:933,52,0	0/0:7,0:7:21.05:0,21,396	0/0:72,0:18:19.60:0,20,248	0/1:90,0:29:9.03:9,0,291	1/1:15,0:15:32.43:271,32,0	0/1:14,0:14:2.81:56,0,3	1/1:18,0:18:27.96:139,28,0	0/1:21,0:20:57.93:67,0,58	1/1:11,0:11:9.73:56,10,0	0/1:21,0:22:22.72:23,0,50	0/0:16,0:16:17.59:0,18,136	0/1:15,0:15:1.19:1,0,47	1/1:8,0:8:9.11:51,9,0	0/0:16,0:16:5.17:0,5,113	0/0:15,0:15:5.92:0,6,16	1/1:4,7:11:32.58:416,33,0	1/1:2,11:13:24.08:357,24,0	0/0:15,0:15:15.43:0,15,46	0/1:10,0:10:3.49:52,0,3	0/1:10,0:9:24.33:43,0,24	0/1:9,0:9:8.24:8,0,11	0/1:15,1:15:14.36:112,0,14	0/1:22,0:22:53.11:53,0,97	0/1:20,0:20:13.88:14,0,48	0/0:13,0:13:12.95:0,13,46	0/1:25,0:25:58.98:59,0,63	0/1:18,0:18:26.99:78,0,27	0/0:12,0:12:15.36:0,15,79
chr10	41904224	.	AAC	A	4770.96	PASS	AB=0.988;AC=47;AF=0.839;AN=56;BaseQRankSum=-0.353;DP=558;FS=8.025;HRun=0;HaplotypeScore=100.0675;InbreedingCoeff=0.3236;MQ=60.95;MQ0=24;MQRankSum=-0.410;QD=9.90;ReadPosRankSum=4.626;VQSLOD=3.8692;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:33,0:32:53.86:471,54,0	0/0:7,0:7:21.05:0,21,319	0/0:69,0:18:13.37:0,13,194	0/1:87,0:28:31.25:31,0,242	1/1:14,1:15:32.78:254,33,0	1/1:8,5:13:23.01:289,23,0	1/1:3,15:18:33.09:420,33,0	1/1:19,2:20:16.65:208,17,0	1/1:9,2:11:28.70:275,29,0	1/1:20,1:21:40.28:231,40,0	0/1:15,1:16:17.62:78,0,18	1/1:15,0:15:5.25:44,5,0	1/1:8,0:8:23.99:247,24,0	0/1:16,0:16:32.20:87,0,32	1/1:14,1:15:7.37:27,7,0	1/1:11,0:11:32.90:274,33,0	1/1:11,1:13:23.91:183,24,0	1/1:15,0:15:19.44:68,19,0	1/1:9,1:10:17.10:123,17,0	0/1:10,0:9:0.32:83,0,0	1/1:8,1:9:15.34:67,15,0	1/1:6,10:15:16.77:305,17,0	1/1:19,3:22:10.45:248,10,0	1/1:17,2:19:30.95:180,31,0	1/1:13,0:13:12.03:42,12,0	0/1:25,0:25:7.63:187,0,8	1/1:18,0:18:22.43:252,22,0	1/1:11,1:12:11.60:96,12,0
chr10	41904225	.	AC	A	7213.83	PASS	AB=1.000;AC=51;AF=0.911;AN=56;BaseQRankSum=-0.564;DP=557;FS=2.350;HRun=2;HaplotypeScore=87.2578;InbreedingCoeff=0.7422;MQ=60.18;MQ0=21;MQRankSum=-0.629;QD=15.06;ReadPosRankSum=3.798;VQSLOD=4.8788;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:33,0:32:49.99:351,50,0	0/0:7,0:7:21:0,21,220	0/0:69,2:21:20.55:0,21,252	0/1:84,0:27:19.56:20,0,149	1/1:15,0:15:32.08:186,32,0	1/1:12,2:14:32.62:241,33,0	1/1:17,2:19:32.34:196,32,0	1/1:7,14:20:40.24:438,40,0	1/1:9,2:11:29.17:202,29,0	1/1:2,18:20:50.86:525,51,0	1/1:4,11:15:15.64:293,16,0	1/1:2,13:15:17.79:201,18,0	1/1:3,4:8:23.79:182,24,0	1/1:10,5:16:29.74:381,30,0	1/1:2,13:15:9.03:116,9,0	1/1:10,1:11:32.37:202,32,0	1/1:13,0:13:22.84:127,23,0	1/1:0,15:15:24.08:302,24,0	1/1:8,3:12:28.92:247,29,0	1/1:5,3:8:23.84:218,24,0	1/1:2,7:9:17.92:183,18,0	1/1:15,1:15:29.97:212,30,0	1/1:8,13:21:42.13:452,42,0	1/1:5,14:19:35.96:399,36,0	1/1:0,13:13:18.05:215,18,0	1/1:2,22:25:28.37:570,28,0	1/1:12,5:18:42.71:370,43,0	1/1:2,10:12:35.95:386,36,0
chr10	41904283	.	CCAA	C	1024.80	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=-2.318;DP=359;FS=7.542;HRun=0;HaplotypeScore=100.1730;InbreedingCoeff=0.7231;MQ=57.72;MQ0=6;MQRankSum=2.979;QD=10.05;ReadPosRankSum=4.260;VQSLOD=2.4799;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:36.19:0,36,371	0/0:5,0:5:9.03:0,9,168	0/0:28,0:17:32.80:0,33,460	0/0:30,0:19:3.41:0,3,314	0/0:8,0:8:18.05:0,18,300	1/1:6,5:9:6.02:91,6,0	1/1:14,2:16:17.93:246,18,0	0/0:20,0:20:2.78:0,3,268	1/1:8,2:10:11.78:178,12,0	0/0:10,0:10:30.09:0,30,585	0/0:11,0:11:27.04:0,27,426	1/1:6,2:6:1.25:33,1,0	1/1:2,3:5:6.02:82,6,0	1/1:5,3:8:6.02:92,6,0	0/0:9,0:9:15.05:0,15,319	0/1:10,0:10:21.91:22,0,219	0/0:19,0:19:39.05:0,39,600	0/0:15,0:15:27.05:0,27,423	0/0:14,0:13:33.04:0,33,430	0/0:4,0:4:8.41:0,8,45	0/0:9,0:9:17.71:0,18,112	1/1:8,2:8:12.04:179,12,0	1/1:6,1:7:5.50:129,6,0	1/1:16,1:15:11.95:160,12,0	0/0:10,0:10:20.89:0,21,235	0/0:14,0:14:29.94:0,30,333	0/0:12,0:12:19.80:0,20,251	0/0:9,0:9:18.95:0,19,287
chr10	41904292	.	A	AG	373.12	PASS	AB=0.899;AC=19;AF=0.339;AN=56;BaseQRankSum=0.946;DP=343;FS=3.314;HRun=0;HaplotypeScore=94.8245;InbreedingCoeff=0.6033;MQ=52.61;MQ0=11;MQRankSum=1.909;QD=2.83;ReadPosRankSum=2.095;VQSLOD=2.4696;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:34.60:0,35,221	0/0:5,0:5:9.03:0,9,121	0/0:26,0:11:30.92:0,31,356	0/1:25,0:12:6.97:7,0,239	0/0:10,0:9:18.06:0,18,229	1/1:7,4:9:5.27:41,5,0	0/1:9,7:16:7.41:76,0,7	0/1:15,0:15:2.44:2,0,120	1/1:7,4:11:9.84:103,10,0	0/0:12,0:12:35.98:0,36,438	0/0:12,0:12:30.04:0,30,384	1/1:5,4:7:0.12:36,0,0	1/1:4,2:6:6.31:24,6,0	1/1:4,2:6:5.80:32,6,0	0/0:9,0:9:15.05:0,15,209	0/0:7,1:8:1.14:0,1,93	0/0:20,0:20:42.14:0,42,574	0/0:14,0:14:27.09:0,27,377	0/0:12,0:11:28.86:0,29,186	0/0:4,0:4:3.72:0,4,9	0/0:9,0:9:9.36:0,9,44	1/1:3,7:8:8.85:73,9,0	1/1:5,3:8:7.35:66,7,0	1/1:5,10:13:14.31:88,14,0	0/0:13,0:12:26.99:0,27,326	0/0:14,0:14:13.65:0,14,142	0/0:8,0:8:17.06:0,17,112	0/0:7,0:7:18.17:0,18,129
chr10	41904295	.	A	AGCGCGCGC	1829.46	PASS	AB=0.973;AC=18;AF=0.321;AN=56;BaseQRankSum=1.346;DP=360;FS=9.617;HRun=0;HaplotypeScore=140.4344;InbreedingCoeff=0.2957;MQ=50.63;MQ0=12;MQRankSum=-6.078;QD=11.43;ReadPosRankSum=-1.651;VQSLOD=1.4165;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:27:26.87:458,27,0	0/0:4,0:4:6.02:0,6,126	0/0:21,0:7:6.02:0,6,138	0/0:22,0:10:5.87:0,6,39	0/0:9,0:8:12.03:0,12,237	0/0:16,0:14:6:0,6,54	0/0:14,0:13:21.04:0,21,217	0/1:13,0:13:41.11:261,0,41	0/0:12,0:12:8.98:0,9,79	0/0:12,0:12:27.02:0,27,327	0/0:13,0:13:18.06:0,18,299	0/1:12,0:9:4.87:12,0,5	0/1:8,0:8:37.73:38,0,61	0/0:7,0:7:6.01:0,6,65	0/0:11,0:11:9.92:0,10,135	0/1:8,0:8:34.10:47,0,34	0/0:23,0:23:33.03:0,33,672	0/0:14,0:14:27.09:0,27,484	1/1:14,0:13:13.47:142,13,0	0/0:4,0:4:0:0,0,0	0/1:8,2:11:0.06:0,0,0	0/1:11,0:9:37.89:38,0,98	0/1:10,0:10:39.21:39,0,87	0/1:16,0:14:78.23:78,0,86	0/0:15,0:14:23.84:0,24,354	1/1:13,2:15:21.06:573,21,0	1/1:8,0:8:6.02:106,6,0	1/1:6,1:7:8.49:210,8,0
chr10	41904304	.	GCA	G	250.44	PASS	AB=0.976;AC=15;AF=0.300;AN=50;BaseQRankSum=0.282;DP=374;FS=11.794;HRun=0;HaplotypeScore=104.7405;InbreedingCoeff=0.3497;MQ=44.68;MQ0=17;MQRankSum=1.762;QD=1.84;ReadPosRankSum=0.335;VQSLOD=1.4143;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:23:5.68:28,6,0	./.	./.	./.	0/0:9,0:8:11.79:0,12,103	0/0:15,0:14:5.67:0,6,36	1/1:15,1:15:8.96:74,9,0	0/0:17,0:16:15.63:0,16,95	0/0:16,0:16:5.97:0,6,46	0/1:16,0:16:48.22:53,0,48	1/1:7,4:11:3.01:33,3,0	0/0:11,0:10:6.63:0,7,41	0/0:9,0:10:6.01:0,6,69	0/0:8,0:10:8.49:0,8,49	1/1:9,0:9:5.94:49,6,0	1/1:3,0:4:2.84:14,3,0	0/0:23,0:23:26.98:0,27,278	0/1:18,0:18:61.74:70,0,62	0/0:12,0:11:5.93:0,6,40	0/0:8,0:7:2.99:0,3,24	0/1:15,0:14:0.08:0,0,0	0/0:14,0:12:4.60:0,5,29	0/0:9,0:11:8.54:0,9,51	0/0:21,0:18:8.98:0,9,76	0/1:13,2:13:71.01:71,0,83	0/0:13,0:14:16.51:0,17,101	0/1:9,0:9:0:0,0,0	0/0:7,0:7:8.95:0,9,76
chr10	41905497	.	TTGTG	T	10116.97	PASS	AB=0.737;AC=35;AF=0.625;AN=56;BaseQRankSum=8.394;DP=752;FS=13.115;HRun=0;HaplotypeScore=181.1958;InbreedingCoeff=0.9045;MQ=54.80;MQ0=6;MQRankSum=-5.860;QD=21.25;ReadPosRankSum=3.702;VQSLOD=3.8526;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:26:30.10:0,30,551	0/0:9,0:9:24.08:0,24,570	0/0:23,0:15:21.07:0,21,445	0/0:26,0:13:20.90:0,21,360	1/1:9,21:31:60.11:897,60,0	1/1:9,22:31:63.21:1004,63,0	1/1:13,24:36:54.18:868,54,0	0/1:18,0:27:61.69:169,0,62	1/1:9,20:28:54.18:878,54,0	0/0:54,0:53:99:0,120,2769	0/0:22,0:22:42.13:0,42,935	1/1:5,12:17:27.09:439,27,0	1/1:9,12:22:39.12:605,39,0	1/1:10,18:28:54.18:878,54,0	0/0:29,0:29:69.16:0,69,1481	0/0:5,0:27:66.21:0,66,1132	1/1:9,0:21:30.03:279,30,0	0/0:27,0:26:57.10:0,57,1209	1/1:5,0:14:24.50:224,24,0	1/1:7,0:39:66:599,66,0	1/1:11,0:23:6.01:56,6,0	1/1:4,19:23:42.10:654,42,0	1/1:3,19:22:38.81:634,39,0	1/1:9,33:42:60.17:948,60,0	0/0:32,0:33:71.98:0,72,1575	1/1:10,0:38:60:541,60,0	1/1:5,0:22:33.02:303,33,0	1/1:1,0:6:15.02:140,15,0
chr10	41905667	.	A	AGTGTGTGT	15227.51	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=0.943;DP=826;FS=7.515;HRun=0;HaplotypeScore=242.2269;InbreedingCoeff=0.8596;MQ=56.90;MQ0=3;MQRankSum=-5.419;QD=22.93;ReadPosRankSum=-1.626;VQSLOD=3.1449;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:35:35.97:0,36,865	0/0:7,0:8:21.07:0,21,507	0/0:42,0:29:3.36:0,3,430	0/0:46,0:37:9.06:0,9,420	1/1:13,0:37:29.14:340,29,0	1/1:6,2:42:30.10:1040,30,0	1/1:8,1:26:18.06:556,18,0	1/1:9,13:31:62.86:1254,63,0	1/1:33,0:36:51.02:977,51,0	1/1:11,0:45:80.20:1335,80,0	1/1:7,0:27:15.47:240,15,0	1/1:7,12:22:14.98:556,15,0	1/1:8,0:28:11.97:419,12,0	1/1:6,2:23:23.86:848,24,0	1/1:10,0:38:3.64:629,4,0	0/0:29,0:30:61.25:0,61,1760	1/1:5,0:16:23.97:198,24,0	1/1:6,0:19:27.01:435,27,0	1/1:5,4:12:21.06:545,21,0	1/1:6,15:28:12.04:441,12,0	1/1:19,22:51:11.84:309,12,0	1/1:2,2:24:19.97:774,20,0	1/1:8,1:29:12.51:442,13,0	1/1:31,0:35:17.17:336,17,0	1/1:6,0:34:39.12:800,39,0	1/1:10,19:35:72.15:1985,72,0	1/1:8,8:16:12.03:502,12,0	1/1:6,0:6:14.99:266,15,0
chr10	41905905	.	A	AAG	2175.98	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-6.207;DP=733;FS=19.170;HRun=0;HaplotypeScore=134.2401;InbreedingCoeff=0.9952;MQ=73.32;MQ0=1;MQRankSum=-2.132;QD=41.06;ReadPosRankSum=0.333;VQSLOD=3.2905;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,26:28:72.25:1246,72,0	0/0:17,0:17:45.15:0,45,604	0/0:19,0:19:51.03:0,51,668	0/0:10,0:10:18.04:0,18,223	0/0:44,0:44:99:0,120,1623	0/0:28,0:28:78.26:0,78,1055	0/0:26,0:26:75.24:0,75,1000	0/0:33,0:33:99:0,99,1312	0/0:26,0:26:66.21:0,66,877	0/0:45,0:45:99:0,129,1745	0/0:23,0:23:63.21:0,63,851	0/0:28,0:28:84.28:0,84,1135	0/0:30,0:29:84.27:0,84,1121	0/0:24,0:24:66.21:0,66,879	0/0:19,0:19:54.18:0,54,731	1/1:2,22:24:60.21:1051,60,0	0/0:31,0:31:78.23:0,78,1035	0/0:20,0:19:42.14:0,42,566	0/0:23,0:23:60.19:0,60,798	0/0:45,0:45:99:0,126,1668	0/0:12,0:12:36.10:0,36,470	0/0:32,0:32:87.28:0,87,1161	0/0:26,0:26:75.19:0,75,978	0/0:25,0:25:72.22:0,72,955	0/0:30,0:30:75.25:0,75,1009	0/0:34,0:34:84.25:0,84,1106	0/0:21,0:21:60.20:0,60,811	0/0:9,0:9:27.09:0,27,363
chr10	41907363	.	T	TA	13703.76	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=8.716;DP=522;FS=6.744;HRun=1;HaplotypeScore=152.5064;InbreedingCoeff=0.9759;MQ=84.24;MQ0=0;MQRankSum=-7.597;QD=28.97;ReadPosRankSum=4.029;VQSLOD=4.3485;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,16:19:48.57:485,49,0	0/0:10,0:10:30.08:0,30,375	0/0:26,0:26:63.04:0,63,808	0/0:13,0:13:36.11:0,36,451	1/1:4,19:24:55.79:544,56,0	1/1:9,15:24:67.58:635,68,0	1/1:1,7:8:20.81:182,21,0	1/1:2,15:20:60.11:608,60,0	1/1:3,14:17:47.07:465,47,0	1/1:3,18:24:72.09:795,72,0	1/1:2,18:21:60.15:682,60,0	1/1:4,17:21:63.15:692,63,0	1/1:2,21:23:68.99:739,69,0	1/1:1,21:22:66.06:682,66,0	1/1:4,20:24:67.89:683,68,0	1/1:5,10:15:36.80:362,37,0	1/1:2,11:13:36.09:391,36,0	1/1:0,15:15:45.12:510,45,0	1/1:2,17:22:64.53:662,65,0	1/1:3,22:28:74.69:762,75,0	1/1:0,9:9:27.07:301,27,0	1/1:1,13:14:41.92:429,42,0	1/1:1,12:13:38.66:378,39,0	1/1:2,12:14:27.73:318,28,0	1/1:7,11:18:52.90:513,53,0	1/1:4,22:28:84.16:918,84,0	1/1:6,26:32:87.83:890,88,0	1/1:1,3:4:8.75:76,9,0
chr10	41907365	.	G	GGAT	26832.66	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=6.952;DP=557;FS=14.245;HRun=0;HaplotypeScore=134.0869;InbreedingCoeff=0.9879;MQ=82.64;MQ0=0;MQRankSum=-8.627;QD=52.82;ReadPosRankSum=2.897;VQSLOD=6.3024;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,16:20:51.17:1014,51,0	0/0:10,0:10:30.10:0,30,525	0/0:24,0:24:60.18:0,60,1016	0/0:15,0:15:36.12:0,36,588	1/1:4,20:24:63.20:1227,63,0	1/1:10,16:26:68.58:1185,69,0	1/1:3,7:10:30.10:565,30,0	1/1:17,15:32:84.27:1552,84,0	1/1:4,14:18:51.13:953,51,0	1/1:10,18:28:77.26:1523,77,0	1/1:3,18:21:57.20:1158,57,0	1/1:4,18:22:63.17:1218,63,0	1/1:4,21:25:69.22:1383,69,0	1/1:2,20:23:69.22:1288,69,0	1/1:4,20:24:69.22:1338,69,0	1/1:3,11:14:42.10:793,42,0	1/1:3,11:14:36.12:705,36,0	1/1:2,15:17:45.15:900,45,0	1/1:6,17:22:59.92:1173,60,0	1/1:4,22:26:69.24:1401,69,0	1/1:3,9:12:27.09:534,27,0	1/1:3,13:16:48.16:963,48,0	1/1:3,13:16:48.15:919,48,0	1/1:1,12:13:27.09:530,27,0	1/1:8,11:19:51.14:936,51,0	1/1:6,22:28:82.75:1562,83,0	1/1:8,25:33:93.30:1780,93,0	1/1:1,3:4:12.04:234,12,0
chr10	41908118	.	G	GT	185.11	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.200;DP=578;FS=0.773;HRun=1;HaplotypeScore=80.6402;InbreedingCoeff=0.8027;MQ=79.68;MQ0=0;MQRankSum=1.717;QD=10.89;ReadPosRankSum=-2.910;VQSLOD=0.6623;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,159,1812	0/0:10,0:10:26.87:0,27,291	0/0:23,0:23:35.84:0,36,431	0/0:23,0:22:41.27:0,41,496	1/1:4,13:17:13.20:272,13,0	0/0:16,0:16:48.15:0,48,604	0/0:29,0:28:86.37:0,86,982	0/0:11,0:11:25.50:0,25,217	0/0:22,0:22:62.72:0,63,692	0/0:20,0:20:59.72:0,60,457	0/0:22,0:22:53.27:0,53,387	0/0:18,0:18:51.12:0,51,616	0/0:24,0:24:72.20:0,72,887	0/0:19,0:19:51.09:0,51,596	0/0:28,0:28:74.64:0,75,567	0/0:31,0:31:90.19:0,90,1075	0/0:37,0:38:99:0,101,754	0/0:15,0:15:41.81:0,42,318	0/0:9,0:9:6.58:0,7,111	0/0:12,0:12:17.94:0,18,154	0/0:17,0:17:16.57:0,17,207	0/0:17,0:17:51.12:0,51,603	0/0:7,0:7:21.03:0,21,240	0/0:31,0:31:93.26:0,93,1157	0/0:24,0:25:59.69:0,60,452	0/0:12,0:12:31.53:0,32,220	0/0:22,0:22:8.69:0,9,130	0/0:6,0:6:12.90:0,13,113
chr10	41908119	.	TC	T	2740.92	PASS	AB=0.932;AC=14;AF=0.250;AN=56;BaseQRankSum=4.428;DP=583;FS=4.724;HRun=10;HaplotypeScore=72.4887;InbreedingCoeff=0.7811;MQ=78.68;MQ0=0;MQRankSum=0.330;QD=15.75;ReadPosRankSum=4.501;VQSLOD=4.1968;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,141,1516	0/0:10,0:10:26.98:0,27,263	0/0:22,0:22:37.84:0,38,352	0/0:22,0:22:23.37:0,23,327	0/0:17,0:17:24.72:0,25,160	0/0:16,0:16:45.12:0,45,498	0/0:28,2:29:22.88:0,23,691	0/0:9,0:11:11.65:0,12,68	0/0:20,2:22:2.01:0,2,467	1/1:3,17:20:50.97:439,51,0	1/1:4,17:21:41.97:364,42,0	0/0:17,1:18:22.07:0,22,472	0/0:24,0:24:66.17:0,66,722	0/1:16,3:19:0.99:1,0,432	1/1:2,26:28:68.98:599,69,0	0/0:30,1:31:61.15:0,61,880	1/1:4,34:38:92.97:807,93,0	1/1:2,12:15:35.03:292,35,0	0/0:9,0:11:11.36:0,11,58	0/0:10,0:12:12.50:0,12,70	0/0:12,0:17:21.28:0,21,134	0/0:18,0:18:45.09:0,45,479	0/1:8,0:8:5.89:6,0,148	0/0:30,1:31:61.18:0,61,903	1/1:5,20:25:47.97:416,48,0	0/0:4,1:13:3.27:0,3,146	0/0:8,0:24:30.85:0,31,167	0/0:6,0:6:11.88:0,12,85
chr10	41909081	.	A	AGTGTGTGTGTGTGTGTGTGTGT	15385.10	PASS	AB=1.000;AC=49;AF=0.875;AN=56;BaseQRankSum=-0.759;DP=637;FS=0.000;HRun=0;HaplotypeScore=356.3699;InbreedingCoeff=0.4391;MQ=63.97;MQ0=8;MQRankSum=-2.953;QD=26.48;ReadPosRankSum=0.212;VQSLOD=2.3712;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:24:0.96:136,0,1	0/0:10,0:10:24.07:0,24,1205	0/0:44,0:26:23.82:0,24,699	0/1:38,0:26:1.80:2,0,358	1/1:15,0:15:2.99:25,3,0	1/1:23,0:23:6:210,6,0	1/1:31,0:31:27.48:567,27,0	1/1:30,0:28:51.09:1519,51,0	1/1:19,0:18:12.04:801,12,0	1/1:27,0:27:47.78:1690,48,0	1/1:16,0:15:0.94:2,1,0	1/1:21,0:21:5.98:47,6,0	1/1:14,0:13:15.05:1101,15,0	1/1:24,0:24:18.51:543,19,0	1/1:31,0:31:12:534,12,0	1/1:26,0:24:14.85:485,15,0	1/1:18,0:17:23.92:635,24,0	1/1:14,0:14:21.48:1161,21,0	1/1:21,0:21:39.05:1816,39,0	1/1:14,8:24:3:148,3,0	1/1:26,0:26:12.46:355,12,0	1/1:20,0:20:6.02:257,6,0	1/1:24,0:24:3.01:190,3,0	0/1:28,0:27:7.70:223,0,8	1/1:21,0:19:6.96:223,7,0	1/1:18,0:17:33.46:1231,33,0	1/1:23,0:22:28.57:1057,29,0	1/1:2,0:4:6.02:428,6,0
chr10	41909748	.	AAAACAAACAAAC	A	8957.92	PASS	AB=0.634;AC=29;AF=0.518;AN=56;BaseQRankSum=3.747;DP=669;FS=3.623;HRun=0;HaplotypeScore=264.9932;InbreedingCoeff=0.6407;MQ=63.11;MQ0=2;MQRankSum=-11.193;QD=22.23;ReadPosRankSum=6.285;VQSLOD=3.2637;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:18,8:26:8.08:410,8,0	0/0:6,0:6:15.05:0,15,840	0/0:27,0:20:15.05:0,15,687	0/0:34,0:28:27.09:0,27,900	0/1:9,1:25:80.94:81,0,170	1/1:9,13:22:30.10:1045,30,0	1/1:12,14:26:19.23:724,19,0	0/0:19,0:31:37.92:0,38,451	1/1:9,11:20:15.05:523,15,0	0/0:12,0:30:64.44:0,64,1332	0/0:6,0:16:36.12:0,36,999	1/1:3,16:19:30.10:1045,30,0	1/1:10,16:26:36.12:1252,36,0	1/1:10,17:27:36.12:1254,36,0	0/0:7,0:27:48.16:0,48,1234	1/1:12,16:28:25.58:939,26,0	0/1:9,0:19:6.48:6,0,103	0/0:12,0:18:21.04:0,21,484	0/1:11,0:23:7.12:7,0,146	0/0:10,0:32:16.15:0,16,374	0/0:9,0:22:18.70:0,19,198	1/1:8,12:20:23.87:474,24,0	1/1:3,10:13:24.08:826,24,0	1/1:8,8:16:11.39:314,11,0	0/0:6,0:22:42.14:0,42,1074	0/1:13,0:43:10.15:10,0,385	0/1:20,0:41:23.14:23,0,109	1/1:4,0:9:9.34:24,9,0
chr10	41910532	.	AT	A	3176.37	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=5.994;DP=455;FS=4.351;HRun=7;HaplotypeScore=92.8280;InbreedingCoeff=0.9534;MQ=66.96;MQ0=1;MQRankSum=3.126;QD=23.19;ReadPosRankSum=3.365;VQSLOD=3.8700;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,32:35:93.07:929,93,0	0/0:15,0:15:42.13:0,42,528	0/0:18,0:13:12.41:0,12,167	0/0:10,0:10:14.78:0,15,180	0/0:0,0:18:48.58:0,49,273	0/0:18,0:18:45.14:0,45,566	0/0:21,0:21:48.14:0,48,582	0/0:19,0:19:37.49:0,37,631	0/0:16,0:16:48.15:0,48,604	1/1:4,14:18:28.03:375,28,0	1/1:0,18:18:51.12:520,51,0	0/0:14,0:14:33.10:0,33,411	0/0:22,0:22:57.18:0,57,717	0/0:21,0:21:63.17:0,63,755	1/1:2,11:13:27.04:275,27,0	1/1:5,7:12:21.04:214,21,0	0/0:15,0:15:42.09:0,42,510	1/1:2,18:20:54.08:540,54,0	0/0:15,0:15:42.09:0,42,488	0/0:14,0:14:39.12:0,39,490	0/0:5,0:5:15.05:0,15,189	0/0:7,0:7:21.07:0,21,264	0/0:13,0:13:33.01:0,33,382	0/0:11,0:11:27.09:0,27,339	1/1:2,19:21:51.11:520,51,0	0/0:12,1:13:2.48:0,2,328	0/0:15,0:15:39.11:0,39,477	0/0:17,0:17:45.10:0,45,525
chr10	41910556	.	TTGTGTGTGTGTG	T	2713.10	PASS	AB=0.599;AC=16;AF=0.308;AN=52;BaseQRankSum=0.941;DP=566;FS=3.499;HRun=0;HaplotypeScore=217.9951;InbreedingCoeff=0.7175;MQ=53.58;MQ0=7;MQRankSum=-6.436;QD=16.25;ReadPosRankSum=2.249;VQSLOD=2.6024;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:41:55.51:0,56,1047	0/0:20,0:20:39.13:0,39,1705	0/0:13,0:7:3.01:0,3,39	./.	0/0:26,0:28:39.50:0,40,1400	1/1:14,7:21:11.87:324,12,0	1/1:17,0:18:9.84:114,10,0	0/0:25,0:24:30.35:0,30,599	0/1:7,16:22:90.66:832,0,91	0/0:19,0:20:34.67:0,35,1334	0/0:24,0:25:23.86:0,24,919	1/1:7,13:20:12.04:414,12,0	1/1:10,11:21:18.06:605,18,0	1/1:13,6:18:9.03:239,9,0	0/0:14,0:17:27.56:0,28,960	0/1:5,0:14:16.76:17,0,302	0/0:18,0:18:27.06:0,27,1000	0/0:24,0:26:41.42:0,41,1299	0/0:20,0:20:15.94:0,16,591	0/0:15,0:28:27.09:0,27,1050	0/0:11,0:11:12.04:0,12,400	./.	1/1:11,6:17:6.02:205,6,0	1/1:6,7:14:9.02:145,9,0	0/0:20,0:23:27.09:0,27,1163	0/0:19,0:21:36.70:0,37,1135	0/0:16,0:25:18.06:0,18,672	0/0:4,0:11:15.05:0,15,737
chr10	41910906	.	TTATC	T	4151.86	PASS	AB=0.850;AC=31;AF=0.620;AN=50;BaseQRankSum=11.344;DP=562;FS=6.810;HRun=0;HaplotypeScore=98.8851;InbreedingCoeff=0.7927;MQ=64.21;MQ0=8;MQRankSum=-0.662;QD=14.93;ReadPosRankSum=0.850;VQSLOD=2.7557;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:24:6.01:56,6,0	1/1:5,6:11:9.03:140,9,0	./.	./.	1/1:11,11:22:29.96:399,30,0	0/0:20,0:20:42.13:0,42,924	0/0:18,0:18:18.03:0,18,309	0/0:45,0:44:14.96:0,15,126	1/1:6,8:14:15.05:228,15,0	1/1:10,13:22:39.12:580,39,0	1/1:7,16:24:42.14:636,42,0	1/1:6,5:11:6.02:82,6,0	1/1:9,8:17:15.05:234,15,0	1/1:9,10:19:21.07:328,21,0	1/1:7,12:19:15.05:234,15,0	1/1:7,0:14:10.57:88,11,0	1/1:9,0:19:6.01:56,6,0	0/1:14,3:17:31.20:202,0,31	./.	0/0:28,0:28:51.13:0,51,1101	0/0:10,0:10:15.05:0,15,354	0/0:12,0:12:18.06:0,18,425	1/1:4,6:10:5.89:93,6,0	1/1:5,4:9:9.03:140,9,0	1/1:6,16:23:45.08:654,45,0	0/0:31,0:31:66.19:0,66,1328	0/0:40,0:40:6.44:0,6,1370	0/0:25,0:25:51.17:0,51,1149
chr10	41911105	.	A	AT	9642.41	PASS	AB=0.588;AC=31;AF=0.554;AN=56;BaseQRankSum=-14.638;DP=629;FS=5.304;HRun=8;HaplotypeScore=58.0885;InbreedingCoeff=0.9212;MQ=76.55;MQ0=0;MQRankSum=0.556;QD=27.63;ReadPosRankSum=-1.667;VQSLOD=4.8870;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,108,958	0/0:10,0:10:30.02:0,30,275	0/0:13,0:13:14.66:0,15,100	0/0:12,0:12:18.01:0,18,165	0/0:30,0:31:52.51:0,53,640	1/1:5,18:23:26.69:561,27,0	1/1:5,22:28:44.58:749,45,0	1/1:4,27:31:81.19:905,81,0	1/1:3,22:25:63.19:727,63,0	0/0:31,0:31:71.29:0,71,658	0/0:23,0:23:59.78:0,60,522	0/1:6,14:20:34.26:402,0,34	1/1:0,23:23:69.21:796,69,0	1/1:1,19:20:48.14:554,48,0	0/0:26,0:26:75.03:0,75,682	0/0:27,0:27:78.04:0,78,714	0/0:27,0:27:65.95:0,66,596	0/0:14,0:15:41.06:0,41,363	1/1:3,12:15:39.10:439,39,0	1/1:4,25:29:75.18:848,75,0	1/1:0,16:15:48.14:554,48,0	1/1:1,19:20:54.08:594,54,0	1/1:5,18:23:54.16:623,54,0	1/1:1,21:23:60.01:672,60,0	0/0:23,0:23:69:0,69,621	1/1:3,16:19:20.70:492,21,0	1/1:2,22:24:47.93:554,48,0	1/1:1,9:10:15.04:173,15,0
chr10	41912858	.	AT	A	12574.59	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-1.830;DP=657;FS=7.612;HRun=10;HaplotypeScore=78.3321;InbreedingCoeff=0.9882;MQ=74.50;MQ0=0;MQRankSum=-6.777;QD=20.65;ReadPosRankSum=3.765;VQSLOD=5.6837;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,37:40:99:885,102,0	0/0:15,0:15:42.09:0,42,453	0/0:13,0:13:25.78:0,26,208	0/0:19,0:20:40.56:0,41,333	1/1:4,25:29:65.96:573,66,0	1/1:0,21:21:53.99:469,54,0	1/1:0,20:20:50.99:443,51,0	1/1:9,24:33:70.95:596,71,0	1/1:1,25:26:71.97:625,72,0	1/1:5,18:23:53.92:458,54,0	1/1:3,25:28:68.98:599,69,0	1/1:4,14:18:41.93:357,42,0	1/1:5,25:30:65.96:572,66,0	1/1:4,15:19:47.95:410,48,0	1/1:4,25:29:65.95:570,66,0	1/1:1,15:16:41.98:364,42,0	1/1:8,34:42:92.97:807,93,0	1/1:4,16:21:47.01:397,47,0	1/1:3,11:14:32.96:282,33,0	1/1:1,21:22:62.99:547,63,0	1/1:8,19:27:33.90:469,34,0	1/1:4,12:16:32.99:287,33,0	1/1:2,18:20:53.99:469,54,0	1/1:1,35:36:74.95:651,75,0	1/1:2,24:26:62.98:547,63,0	1/1:1,29:30:80.96:703,81,0	1/1:2,15:17:44.99:391,45,0	1/1:1,4:5:12:104,12,0
chr10	41912944	.	A	AACACACAC	13421.99	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=1.041;DP=712;FS=0.915;HRun=0;HaplotypeScore=234.1153;InbreedingCoeff=0.7468;MQ=57.02;MQ0=13;MQRankSum=-0.891;QD=21.82;ReadPosRankSum=1.877;VQSLOD=3.9003;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:34,1:40:5.98:857,6,0	0/0:6,0:6:9.03:0,9,197	0/0:51,0:22:5.09:0,5,217	0/0:40,0:27:21.72:0,22,291	1/1:18,1:25:33.09:549,33,0	1/1:17,3:20:36.12:972,36,0	1/1:2,16:21:5.98:86,6,0	1/1:30,0:29:47.30:618,47,0	1/1:3,4:13:3.01:97,3,0	1/1:27,0:28:51.06:879,51,0	1/1:13,0:15:18.26:264,18,0	1/1:19,0:26:29.69:483,30,0	1/1:20,0:22:30.08:466,30,0	1/1:15,0:16:17.58:231,18,0	1/1:22,0:29:25.84:422,26,0	1/1:23,0:27:43.46:950,43,0	1/1:17,0:19:18.06:358,18,0	1/1:23,0:24:27.07:476,27,0	1/1:15,0:16:17.49:296,17,0	1/1:16,0:27:51.14:830,51,0	1/1:38,0:44:44.29:634,44,0	1/1:19,0:22:26.55:425,27,0	1/1:13,0:17:21.41:358,21,0	1/1:26,0:34:21.07:392,21,0	1/1:23,0:33:47.88:774,48,0	1/1:17,0:28:66.18:1134,66,0	1/1:25,0:30:57.06:805,57,0	1/1:1,0:5:3.01:65,3,0
chr10	41913568	.	G	GTGTATA	15580.46	PASS	AB=1.000;AC=30;AF=0.536;AN=56;BaseQRankSum=1.986;DP=669;FS=2.036;HRun=0;HaplotypeScore=193.1384;InbreedingCoeff=0.8610;MQ=61.77;MQ0=1;MQRankSum=-12.061;QD=43.52;ReadPosRankSum=-0.283;VQSLOD=4.6357;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:51.17:0,51,1045	0/0:9,0:9:21.04:0,21,355	0/1:17,0:14:8.58:9,0,452	0/1:19,0:17:6.37:6,0,125	0/0:30,0:30:69.19:0,69,1315	1/1:10,17:27:51.15:1449,51,0	1/1:20,5:25:32.76:559,33,0	0/0:40,0:40:81.23:0,81,1471	1/1:8,12:20:45.14:1261,45,0	1/1:9,29:39:99:2735,99,0	1/1:16,9:25:39.12:1145,39,0	1/1:11,13:24:42.13:1162,42,0	1/1:15,14:30:54.17:1587,54,0	1/1:13,12:25:44.96:1244,45,0	1/1:8,17:25:39.13:1256,39,0	0/0:34,0:34:81.24:0,81,1662	0/0:25,0:25:60.15:0,60,1201	1/1:5,2:7:9.02:220,9,0	0/0:30,0:29:51.17:0,51,1040	0/0:32,0:32:66:0,66,1296	0/0:17,0:17:39.10:0,39,745	1/1:5,7:12:21.06:576,21,0	1/1:10,10:20:33.10:886,33,0	1/1:12,5:17:20.82:407,21,0	1/1:16,10:26:39.12:1077,39,0	0/0:23,0:23:41.19:0,41,1073	0/0:35,0:35:78.25:0,78,1611	0/0:10,0:10:9.01:0,9,154
chr10	41913596	.	G	GTA	6092.34	PASS	AB=1.000;AC=28;AF=0.500;AN=56;BaseQRankSum=13.287;DP=591;FS=3.505;HRun=0;HaplotypeScore=167.8494;InbreedingCoeff=0.8220;MQ=56.62;MQ0=1;MQRankSum=-4.066;QD=19.97;ReadPosRankSum=-3.448;VQSLOD=4.2496;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:66.07:0,66,765	0/0:6,0:6:12.04:0,12,150	0/0:12,0:12:10.82:0,11,114	0/0:15,0:12:21.40:0,21,199	0/0:23,0:23:57.15:0,57,685	1/1:25,0:25:57.06:553,57,0	1/1:17,0:17:19.09:321,19,0	0/0:37,0:37:90.21:0,90,1017	1/1:21,0:21:42.04:411,42,0	0/1:31,0:31:80.88:351,0,81	1/1:13,0:13:33.04:323,33,0	1/1:23,0:23:5.07:346,5,0	0/1:19,0:19:7.49:225,0,7	1/1:18,0:18:36.93:360,37,0	1/1:28,0:28:63.05:597,63,0	0/0:28,0:28:78.17:0,78,918	1/1:5,23:28:57.17:939,57,0	1/1:9,0:9:20.67:192,21,0	0/0:25,0:24:57.09:0,57,640	0/0:35,0:35:81.21:0,81,983	0/0:12,0:12:36.10:0,36,433	1/1:12,0:12:21.03:211,21,0	1/1:24,0:24:57.07:566,57,0	1/1:11,0:11:14.61:159,15,0	1/1:26,0:26:47.06:538,47,0	0/0:29,0:29:30.48:0,30,885	0/0:34,0:34:84.22:0,84,1010	0/0:2,0:2:6.02:0,6,75
chr10	41913606	.	A	ATG	5062.14	PASS	AB=0.985;AC=28;AF=0.500;AN=56;BaseQRankSum=16.528;DP=607;FS=6.390;HRun=0;HaplotypeScore=162.8986;InbreedingCoeff=0.7170;MQ=58.51;MQ0=3;MQRankSum=-6.997;QD=14.63;ReadPosRankSum=2.645;VQSLOD=4.6592;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:69.62:0,70,1021	0/0:4,0:4:12.04:0,12,183	0/0:20,0:17:20.24:0,20,318	0/0:14,0:12:32.98:0,33,351	0/0:26,0:26:73.39:0,73,970	1/1:23,0:23:29.45:142,29,0	0/1:20,0:20:21.06:61,0,21	0/0:37,0:37:99:0,108,1535	1/1:19,0:19:20:115,20,0	1/1:14,16:30:39.19:791,39,0	1/1:3,16:19:33.11:537,33,0	0/1:23,0:23:4.93:76,0,5	0/1:16,0:16:26.87:52,0,27	1/1:17,0:17:20.50:106,21,0	1/1:4,25:31:63.21:1022,63,0	0/0:26,0:26:78.26:0,78,1179	1/1:23,0:23:56.90:494,57,0	1/1:1,13:14:24.05:369,24,0	0/0:25,0:24:60.18:0,60,888	0/0:33,0:33:99:0,99,1358	0/0:14,0:14:42.11:0,42,596	1/1:12,0:12:13.57:68,14,0	1/1:28,0:28:32.19:170,32,0	1/1:9,0:9:11.48:67,11,0	1/1:4,26:30:60.18:987,60,0	0/1:30,2:32:6.37:6,0,1177	0/0:33,0:33:96.23:0,96,1357	0/0:2,0:2:6.02:0,6,92
chr10	41913608	.	A	ATG	9609.28	PASS	AB=0.857;AC=31;AF=0.554;AN=56;BaseQRankSum=10.225;DP=613;FS=4.006;HRun=0;HaplotypeScore=142.1297;InbreedingCoeff=0.7536;MQ=57.69;MQ0=3;MQRankSum=-8.438;QD=25.83;ReadPosRankSum=1.449;VQSLOD=5.8951;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:50.47:0,50,767	0/0:4,0:4:12.04:0,12,153	0/1:22,0:19:8.50:8,0,265	0/0:13,0:11:20.11:0,20,225	0/0:26,0:26:72.12:0,72,815	1/1:3,20:24:57.19:951,57,0	1/1:4,16:21:21.14:583,21,0	0/0:38,0:38:86.98:0,87,965	1/1:3,16:19:42.14:700,42,0	1/1:30,0:30:57.11:837,57,0	1/1:19,0:19:33.11:540,33,0	1/1:5,17:23:21.92:607,22,0	0/1:4,12:16:7.73:410,0,8	1/1:4,13:17:37.01:601,37,0	1/1:29,0:30:63.21:1020,63,0	0/0:26,0:26:66.18:0,66,811	1/1:24,0:24:38.05:475,38,0	1/1:14,0:14:1.93:323,2,0	0/0:24,0:23:45.11:0,45,525	0/0:34,0:34:92.90:0,93,1080	0/0:14,0:14:38.80:0,39,413	1/1:0,13:13:21.07:350,21,0	1/1:2,26:29:57.19:951,57,0	1/1:2,8:10:14.41:248,14,0	1/1:30,0:30:60.20:989,60,0	0/1:31,0:31:14.57:15,0,848	0/0:33,0:33:87.21:0,87,1040	0/0:2,0:2:6.02:0,6,76
chr10	41916173	.	TA	T	475.89	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.665;DP=710;FS=0.000;HRun=9;HaplotypeScore=68.6672;InbreedingCoeff=0.9606;MQ=72.76;MQ0=0;MQRankSum=-2.574;QD=22.66;ReadPosRankSum=0.412;VQSLOD=4.3137;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,1:20:23.69:0,24,526	0/0:19,0:19:57.17:0,57,658	0/0:16,0:16:32.91:0,33,338	0/0:13,0:13:11.01:0,11,277	0/0:38,0:38:99:0,105,1192	0/0:38,0:38:99:0,102,1177	0/0:20,0:21:47.97:0,48,534	0/0:29,0:29:75.20:0,75,840	0/0:22,0:22:60.18:0,60,692	0/0:30,0:31:84.23:0,84,956	0/0:30,0:30:81.24:0,81,935	0/0:24,1:25:44.74:0,45,766	0/0:34,1:35:74.82:0,75,1095	0/0:21,0:21:48.13:0,48,546	0/0:27,0:27:75.22:0,75,865	0/0:26,0:26:54.16:0,54,623	1/1:0,21:21:63.02:571,63,0	0/0:22,0:22:54.14:0,54,612	0/0:23,0:23:42.12:0,42,485	0/0:43,0:43:99:0,110,1290	0/0:16,0:16:42.12:0,42,484	0/0:26,0:26:72.20:0,72,821	0/0:22,0:22:63.19:0,63,727	0/0:17,0:18:47.96:0,48,523	0/0:34,1:35:70.06:0,70,1039	0/0:23,0:23:63.17:0,63,711	0/0:39,0:39:99:0,108,1199	0/0:11,0:11:33.10:0,33,381
chr10	41916841	.	T	TCA	29341.90	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-12.484;DP=668;FS=3.759;HRun=0;HaplotypeScore=63.2524;InbreedingCoeff=0.9927;MQ=83.13;MQ0=4;MQRankSum=-7.571;QD=50.94;ReadPosRankSum=3.787;VQSLOD=6.0723;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:51.17:0,51,781	0/0:13,0:13:39.13:0,39,597	0/0:24,0:24:69.22:0,69,1026	0/0:17,0:18:46.95:0,47,659	1/1:1,33:34:96.33:1848,96,0	1/1:1,26:28:78.27:1503,78,0	1/1:1,21:22:51.17:985,51,0	1/1:6,26:31:87.29:1609,87,0	1/1:0,27:27:69.24:1333,69,0	1/1:3,32:35:99:1901,99,0	1/1:3,17:20:51.17:979,51,0	1/1:0,20:19:57.20:1099,57,0	1/1:2,21:23:57.20:1101,57,0	1/1:2,29:30:78.27:1505,78,0	1/1:1,27:28:63.22:1217,63,0	0/0:19,0:19:57.19:0,57,873	1/1:1,26:27:78.27:1500,78,0	1/1:2,11:14:30.10:579,30,0	1/1:1,15:16:48.14:892,48,0	1/1:2,27:29:78.27:1506,78,0	1/1:0,13:13:39.13:753,39,0	1/1:3,29:32:84.29:1623,84,0	1/1:1,24:25:69.24:1333,69,0	1/1:1,19:20:51.17:985,51,0	1/1:1,34:35:99:1971,102,0	1/1:1,20:21:63.22:1207,63,0	1/1:1,33:34:87.30:1681,87,0	1/1:0,6:6:12.04:232,12,0
chr10	41917423	.	GCA	G	148.24	PASS	AB=0.958;AC=7;AF=0.125;AN=56;BaseQRankSum=-0.614;DP=706;FS=5.006;HRun=0;HaplotypeScore=153.6610;InbreedingCoeff=0.3612;MQ=62.29;MQ0=7;MQRankSum=0.104;QD=1.27;ReadPosRankSum=1.025;VQSLOD=2.5809;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:43,1:43:10.91:11,0,302	0/1:11,0:11:20.52:21,0,279	0/0:34,0:23:3.01:0,3,45	0/0:25,0:12:3.01:0,3,36	1/1:10,0:10:4.74:20,5,0	0/0:23,0:22:36.25:0,36,396	0/0:25,0:25:38.25:0,38,329	0/0:30,0:29:26.81:0,27,217	0/1:23,3:26:62.31:62,0,134	0/0:18,0:18:32.81:0,33,286	0/0:21,0:21:12.44:0,12,96	0/0:21,0:21:24.25:0,24,420	0/0:33,1:34:25.71:0,26,551	0/0:32,0:32:55.29:0,55,578	0/0:18,0:18:11.98:0,12,98	0/0:39,1:40:27.57:0,28,317	1/1:26,0:26:25.50:165,25,0	0/0:20,0:20:11.33:0,11,120	0/0:20,0:19:29.08:0,29,233	0/0:26,0:26:44.74:0,45,444	0/0:45,0:45:29.09:0,29,503	0/0:20,0:20:36.19:0,36,370	0/0:22,0:22:23.59:0,24,254	0/0:38,0:37:78.86:0,79,754	0/0:13,0:13:14.97:0,15,122	0/0:26,0:25:33.14:0,33,319	0/0:33,0:33:60.34:0,60,594	0/0:5,0:4:6.12:0,6,42
chr10	41917454	.	CAT	C	3495.99	PASS	AB=1.000;AC=32;AF=0.571;AN=56;BaseQRankSum=-6.293;DP=751;FS=11.684;HRun=0;HaplotypeScore=154.3440;InbreedingCoeff=-0.3222;MQ=56.68;MQ0=10;MQRankSum=1.717;QD=5.15;ReadPosRankSum=-5.944;VQSLOD=0.2063;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:51,0:49:45.63:178,0,46	0/1:10,0:10:9.23:9,0,300	0/0:21,0:10:20.16:0,20,206	0/0:22,0:11:19.33:0,19,241	1/1:14,0:14:14.28:90,14,0	0/1:29,0:28:80.13:122,0,80	0/1:27,0:27:22.94:161,0,23	0/1:31,0:30:49.24:201,0,49	1/1:26,0:26:7.66:168,8,0	0/1:23,0:23:28.66:73,0,29	1/1:25,0:25:29.46:229,29,0	0/1:25,0:25:62.04:121,0,62	0/1:25,0:25:40.45:40,0,129	0/1:40,0:40:63.09:211,0,63	0/0:29,0:29:1.44:0,1,5	0/1:32,0:32:0.28:203,0,0	1/1:5,24:29:32.95:363,33,0	0/1:20,0:20:5.10:84,0,5	0/1:22,0:22:46.23:68,0,46	0/1:32,0:32:16.06:185,0,16	0/1:46,0:46:61.96:193,0,62	0/1:19,0:19:42.94:43,0,59	1/1:26,0:26:19.01:185,19,0	0/1:41,0:41:92.58:157,0,93	0/1:13,0:13:1.09:39,0,1	1/1:28,0:26:0.33:150,0,0	0/1:38,0:38:91.08:157,0,91	1/1:7,0:6:6.40:64,6,0
chr10	41917456	.	TAC	T	8909.16	PASS	AB=0.969;AC=44;AF=0.786;AN=56;BaseQRankSum=-0.944;DP=748;FS=28.962;HRun=0;HaplotypeScore=138.7403;InbreedingCoeff=0.3292;MQ=57.31;MQ0=9;MQRankSum=-0.528;QD=12.86;ReadPosRankSum=5.687;VQSLOD=2.5769;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:17,33:48:41.28:494,41,0	0/0:10,0:10:23.23:0,23,295	0/0:19,1:10:26.91:0,27,353	0/0:25,0:14:41.48:0,41,528	1/1:16,0:16:4.74:20,5,0	0/1:29,1:29:7.53:433,0,8	1/1:28,0:28:34.28:497,34,0	1/1:28,1:28:18.08:417,18,0	1/1:4,22:26:36.58:446,37,0	0/1:22,1:23:25.77:408,0,26	1/1:24,0:24:17.55:396,18,0	1/1:23,3:26:31.83:452,32,0	0/1:24,1:25:24.76:157,0,25	1/1:39,1:40:39.86:711,40,0	1/1:29,0:29:5.25:25,5,0	1/1:6,26:32:57.05:712,57,0	1/1:28,0:28:25.68:165,26,0	0/1:20,0:20:11.02:37,0,11	1/1:20,1:21:31.89:274,32,0	1/1:32,0:32:44.78:510,45,0	0/1:44,1:45:11.21:485,0,11	1/1:19,1:20:17.54:228,18,0	1/1:23,3:26:43.11:556,43,0	1/1:41,1:42:11.54:548,12,0	1/1:11,1:12:2.13:9,2,0	1/1:25,0:24:39.69:505,40,0	0/1:35,2:37:4.14:350,0,4	1/1:7,0:6:5.07:73,5,0
chr10	41917458	.	C	CACAT	2927.19	PASS	AB=0.943;AC=23;AF=0.411;AN=56;BaseQRankSum=-10.202;DP=749;FS=1.841;HRun=0;HaplotypeScore=189.5231;InbreedingCoeff=-0.2640;MQ=57.94;MQ0=8;MQRankSum=0.492;QD=5.39;ReadPosRankSum=-3.132;VQSLOD=1.8196;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:47:56.94:0,57,510	0/0:9,0:9:27.04:0,27,385	0/0:21,0:13:27.92:0,28,409	0/0:24,0:15:41.49:0,41,596	0/0:16,0:16:14.75:0,15,94	0/1:29,0:28:99:134,0,143	0/1:26,0:26:39.64:183,0,40	0/1:29,0:28:99:141,0,108	0/0:26,0:26:43.91:0,44,354	1/1:23,1:25:11.13:383,11,0	1/1:23,1:24:8.84:324,9,0	0/1:25,0:26:99:133,0,119	0/1:24,0:25:19.79:20,0,162	0/1:39,0:40:99:140,0,181	1/1:0,28:31:12.51:279,13,0	0/0:32,0:32:62.72:0,63,571	0/0:29,0:29:32.29:0,32,363	0/1:7,9:20:44.18:178,0,44	0/1:20,0:20:76.27:78,0,76	0/1:32,0:32:72.11:120,0,72	0/1:45,0:45:99:126,0,166	0/1:20,0:20:76.98:77,0,126	0/1:26,0:26:80.45:122,0,80	0/1:43,0:44:99:158,0,210	0/1:4,9:14:11.03:227,0,11	0/1:23,0:23:14.78:224,0,15	0/1:37,0:37:43.12:43,0,236	0/1:6,0:6:11.24:11,0,32
chr10	41917703	.	A	AT	17409.88	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-10.565;DP=772;FS=17.295;HRun=8;HaplotypeScore=75.4655;InbreedingCoeff=0.9988;MQ=71.72;MQ0=1;MQRankSum=-2.149;QD=26.83;ReadPosRankSum=1.124;VQSLOD=3.6250;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,104,956	0/0:16,0:16:42.02:0,42,384	0/0:17,0:16:28.89:0,29,234	0/0:18,0:17:35.97:0,36,321	1/1:2,1:17:21.46:142,21,0	1/1:2,28:30:75.22:865,75,0	1/1:4,23:27:69.21:796,69,0	1/1:14,34:48:99:1154,102,0	1/1:5,20:26:56.96:623,57,0	1/1:7,35:42:99:1196,105,0	1/1:5,27:32:75.18:845,75,0	1/1:3,29:32:53.77:870,54,0	1/1:4,25:30:78.06:876,78,0	1/1:4,21:25:60.18:693,60,0	1/1:1,20:21:54.16:623,54,0	0/0:36,0:36:95.96:0,96,863	1/1:3,0:24:48.29:245,48,0	1/1:1,14:15:39.12:450,39,0	1/1:9,21:32:68.87:755,69,0	1/1:2,21:23:33.19:616,33,0	1/1:3,20:23:57.17:658,57,0	1/1:1,34:36:93.07:1038,93,0	1/1:1,25:26:69.30:759,69,0	1/1:0,29:29:84.25:969,84,0	1/1:3,30:33:84.25:970,84,0	1/1:4,29:33:62.76:952,63,0	1/1:2,29:32:81.24:935,81,0	1/1:1,10:11:33.10:380,33,0
chr10	41918312	.	T	TA	8061.78	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-15.770;DP=596;FS=0.320;HRun=8;HaplotypeScore=57.5662;InbreedingCoeff=0.9963;MQ=76.33;MQ0=0;MQRankSum=-1.847;QD=27.61;ReadPosRankSum=3.317;VQSLOD=5.3233;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:87.02:0,87,786	0/0:13,0:13:32.99:0,33,297	0/0:17,0:17:27.38:0,27,329	0/0:14,0:13:26.53:0,27,270	0/0:2,0:24:42.19:0,42,138	1/1:6,24:29:69.21:796,69,0	1/1:3,22:25:51.15:589,51,0	0/0:31,0:31:78:0,78,700	1/1:3,18:21:57.15:645,57,0	1/1:4,26:30:81.24:933,81,0	1/1:1,25:26:72.21:830,72,0	1/1:0,19:19:45.13:519,45,0	1/1:4,32:36:78.21:888,78,0	1/1:1,13:14:36.08:403,36,0	1/1:0,17:17:42.12:485,42,0	0/0:24,0:24:66.02:0,66,599	0/0:1,0:25:48.89:0,49,144	1/1:4,10:14:24.07:277,24,0	0/0:23,0:23:57.02:0,57,522	0/0:28,0:28:66.02:0,66,599	0/0:10,0:10:24:0,24,216	1/1:1,12:13:36.11:415,36,0	1/1:1,14:15:33.10:381,33,0	1/1:1,5:6:15.04:173,15,0	1/1:1,25:26:63.19:727,63,0	0/0:27,0:27:69.03:0,69,631	0/0:31,0:31:87.03:0,87,790	0/0:7,0:7:21.01:0,21,192
chr10	41918626	.	AT	A	11857.72	PASS	AB=1.000;AC=47;AF=0.839;AN=56;BaseQRankSum=9.498;DP=601;FS=1.630;HRun=9;HaplotypeScore=91.2378;InbreedingCoeff=0.8465;MQ=76.78;MQ0=0;MQRankSum=-1.834;QD=22.37;ReadPosRankSum=0.730;VQSLOD=5.3051;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:12,1:13:5.66:0,6,318	0/0:17,0:17:48.14:0,48,554	0/0:12,1:12:14.98:0,15,225	0/1:17,0:14:9.33:9,0,74	1/1:2,26:28:74.93:675,75,0	1/1:2,26:28:75.03:686,75,0	1/1:2,9:11:27.01:247,27,0	1/1:6,31:37:90.02:815,90,0	1/1:1,20:21:57.03:522,57,0	1/1:1,28:29:84.02:760,84,0	1/1:3,20:23:48.01:439,48,0	1/1:2,26:28:69.02:632,69,0	1/1:4,26:30:72.03:659,72,0	1/1:0,23:23:63.03:577,63,0	1/1:0,18:18:51.03:467,51,0	0/0:28,0:28:78.23:0,78,900	1/1:3,14:17:42.01:384,42,0	1/1:3,12:15:36:329,36,0	1/1:4,11:15:33:299,33,0	1/1:1,22:24:62.01:547,62,0	1/1:0,11:13:34.09:287,34,0	1/1:0,23:23:63.02:577,63,0	1/1:1,16:17:42.02:384,42,0	1/1:1,13:14:36.01:330,36,0	1/1:1,22:23:60.03:549,60,0	1/1:6,23:29:69:622,69,0	1/1:2,34:36:89.88:823,90,0	1/1:2,9:11:26.95:238,27,0
chr10	41921203	.	AG	A	590.20	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-0.780;DP=659;FS=0.784;HRun=7;HaplotypeScore=88.8859;InbreedingCoeff=0.9689;MQ=85.63;MQ0=0;MQRankSum=-2.947;QD=20.35;ReadPosRankSum=1.187;VQSLOD=3.0160;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,99,1218	0/0:10,0:10:30.08:0,30,364	0/0:21,0:21:50.68:0,51,554	0/0:22,0:22:51.14:0,51,620	1/1:5,24:29:68.98:685,69,0	0/0:18,0:18:42.13:0,42,515	0/0:24,0:24:68.89:0,69,833	0/0:21,0:21:42.09:0,42,476	0/0:18,0:18:52.38:0,52,612	0/0:30,0:30:78.22:0,78,965	0/0:21,0:21:60.19:0,60,754	0/0:22,0:22:66.18:0,66,771	0/0:28,0:28:74.16:0,74,920	0/0:28,0:28:70.76:0,71,839	0/0:34,0:34:99:0,99,1207	0/0:25,0:25:75.23:0,75,930	0/0:19,0:19:54.15:0,54,663	0/0:12,0:12:30.10:0,30,377	0/0:30,0:30:72.19:0,72,838	0/0:31,0:31:74.87:0,75,879	0/0:22,0:22:44.94:0,45,625	0/0:12,0:12:33.10:0,33,403	0/0:34,0:34:88.55:0,89,1063	0/0:16,0:16:35.08:0,35,381	0/0:26,0:26:72.23:0,72,906	0/0:28,0:28:67.14:0,67,800	0/0:37,0:37:97.14:0,97,1135	0/0:5,0:5:12.04:0,12,147
chr10	41921807	.	GTGTGTGTGTGTGTGTGTGTA	G	1087.06	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=2.147;DP=614;FS=0.000;HRun=0;HaplotypeScore=263.4249;InbreedingCoeff=0.8860;MQ=49.56;MQ0=31;MQRankSum=-1.365;QD=19.07;ReadPosRankSum=-1.337;VQSLOD=2.0030;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:33,0:31:20.36:274,20,0	0/0:10,0:9:24.05:0,24,866	0/0:16,0:9:14.83:0,15,296	0/0:23,0:6:15.02:0,15,211	0/0:18,0:15:24.06:0,24,870	0/0:34,0:34:51.14:0,51,3126	0/0:33,0:32:69.64:0,70,2269	0/0:27,0:24:60.04:0,60,865	0/0:17,0:16:33.55:0,34,1653	0/0:27,0:24:20.91:0,21,1639	0/0:11,0:10:5.90:0,6,72	0/0:27,0:26:60.18:0,60,3446	0/0:20,0:20:39.53:0,40,1908	0/0:22,0:22:54.66:0,55,3749	0/0:15,0:15:9.22:0,9,942	1/1:2,22:24:18.53:931,19,0	0/0:18,0:18:12.88:0,13,979	0/0:20,0:19:42.79:0,43,1135	0/0:15,0:13:34.97:0,35,992	0/0:21,0:21:33.08:0,33,793	0/0:33,0:30:55.33:0,55,1845	0/0:19,0:19:33.08:0,33,1821	0/0:23,0:21:57.13:0,57,2546	0/0:32,0:30:66.21:0,66,3634	0/0:19,0:19:45.61:0,46,1342	0/0:21,0:20:57.11:0,57,2039	0/0:22,0:22:48.13:0,48,1468	0/0:14,0:12:33.05:0,33,608
chr10	41921825	.	GTATGTA	G	2316.59	PASS	AB=0.985;AC=17;AF=0.315;AN=54;BaseQRankSum=9.318;DP=588;FS=0.452;HRun=0;HaplotypeScore=141.1914;InbreedingCoeff=0.2068;MQ=49.88;MQ0=27;MQRankSum=-3.027;QD=8.39;ReadPosRankSum=-2.580;VQSLOD=2.1773;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:22:3.36:24,3,0	0/1:12,0:11:6.92:7,0,547	./.	0/0:9,0:3:3:0,3,50	0/0:18,0:15:5.38:0,5,103	0/0:35,0:36:57.64:0,58,1163	0/1:24,0:26:37.48:37,0,679	0/0:28,0:24:45.42:0,45,993	0/0:17,0:17:30.10:0,30,643	0/1:27,0:26:0.75:843,0,1	0/0:2,10:12:0.71:0,1,2	0/0:26,0:25:53.51:0,54,1290	0/0:19,0:20:6.30:0,6,643	0/0:21,0:21:45.29:0,45,1373	1/1:13,1:13:29.58:437,30,0	0/1:24,0:24:21.17:115,0,21	0/1:18,0:18:5.37:5,0,394	1/1:22,0:23:18.95:415,19,0	0/0:19,0:13:29.22:0,29,542	0/0:24,0:24:33.03:0,33,570	0/1:31,0:27:3.99:4,0,661	0/0:21,0:22:2.45:0,2,786	0/0:21,0:20:54.16:0,54,1096	0/0:30,0:28:48.37:0,48,1313	1/1:15,1:17:26.73:420,27,0	0/1:25,0:24:75.63:76,0,846	0/1:19,0:19:77.78:78,0,352	0/1:13,0:11:19.76:20,0,277
chr10	41921829	.	GTA	G	1189.88	PASS	AB=1.000;AC=13;AF=0.241;AN=54;BaseQRankSum=10.661;DP=588;FS=2.801;HRun=0;HaplotypeScore=110.9398;InbreedingCoeff=0.4861;MQ=50.31;MQ0=26;MQRankSum=-0.608;QD=6.23;ReadPosRankSum=-1.626;VQSLOD=2.7722;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:19:17.42:0,17,112	0/0:12,0:11:14.93:0,15,554	./.	0/0:9,0:3:5.05:0,5,63	0/0:16,0:13:17.14:0,17,127	0/0:36,0:36:40.99:0,41,990	0/0:27,0:26:55.79:0,56,828	0/0:29,0:26:61.49:0,61,1260	0/0:15,0:15:36.12:0,36,652	1/1:26,1:25:10.36:459,10,0	0/0:11,1:11:0:0,0,0	0/0:26,0:25:42.43:0,42,1024	0/1:19,0:19:8.53:9,0,569	0/0:21,0:21:34.58:0,35,983	1/1:15,0:14:29.12:241,29,0	0/0:24,0:24:10.74:0,11,92	0/0:19,0:19:14.92:0,15,415	1/1:22,1:22:23.63:265,24,0	0/0:21,0:15:45.09:0,45,761	0/0:24,0:24:36.12:0,36,677	0/1:32,0:28:0.83:1,0,667	0/0:22,0:22:44.45:0,44,760	0/0:22,0:21:53.49:0,53,915	0/0:30,0:28:43.28:0,43,1170	1/1:15,2:17:32.57:278,33,0	0/1:28,0:27:38.28:38,0,867	0/1:18,0:18:43.80:44,0,384	0/1:12,0:11:20.70:21,0,336
chr10	41922559	.	TAA	T	2902.69	PASS	AB=0.691;AC=31;AF=0.554;AN=56;BaseQRankSum=2.755;DP=514;FS=1.953;HRun=16;HaplotypeScore=77.7854;InbreedingCoeff=0.7130;MQ=75.42;MQ0=3;MQRankSum=-0.046;QD=9.33;ReadPosRankSum=2.069;VQSLOD=1.9176;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,0:21:30.29:132,30,0	0/0:6,0:7:18.05:0,18,223	0/0:42,0:25:35.21:0,35,364	0/0:31,0:14:4.66:0,5,109	1/1:6,0:33:44.58:188,45,0	0/0:22,0:24:51.12:0,51,620	0/1:8,1:11:5.27:5,0,153	1/1:13,11:25:25.98:265,26,0	0/0:8,1:12:6.29:0,6,249	0/1:5,10:17:3.63:103,0,4	1/1:6,14:24:22.83:212,23,0	0/0:11,0:15:30:0,30,311	0/0:13,0:13:31.81:0,32,298	0/0:13,1:14:11:0,11,392	1/1:2,6:11:5.64:120,6,0	1/1:0,0:14:32.93:140,33,0	1/1:4,19:28:34.98:386,35,0	1/1:3,16:21:6.67:306,7,0	0/1:12,8:21:5.24:166,0,5	1/1:10,17:31:3:269,3,0	1/1:3,4:7:5.95:50,6,0	0/0:7,0:10:26.40:0,26,269	0/0:18,0:20:28.76:0,29,276	0/0:14,0:14:12.32:0,12,408	1/1:4,11:16:22.76:186,23,0	1/1:1,8:11:29.45:224,29,0	1/1:3,12:17:32.64:304,33,0	1/1:0,2:2:5.99:50,6,0
chr10	41923769	.	TA	T	3040.93	PASS	AB=0.957;AC=15;AF=0.278;AN=54;BaseQRankSum=9.952;DP=462;FS=9.540;HRun=6;HaplotypeScore=63.7182;InbreedingCoeff=0.9024;MQ=80.73;MQ0=2;MQRankSum=0.794;QD=18.32;ReadPosRankSum=-1.693;VQSLOD=2.2926;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:51.17:0,51,671	0/0:7,0:7:21.05:0,21,257	0/0:27,1:19:31.36:0,31,380	0/1:43,1:29:0.73:1,0,375	0/0:23,0:23:63.18:0,63,798	0/0:21,0:21:63.17:0,63,809	0/0:8,0:8:24.06:0,24,301	1/1:5,33:38:97.11:1024,97,0	0/0:13,0:13:39.12:0,39,499	0/0:22,0:22:57.08:0,57,726	0/0:35,0:35:99:0,102,1341	0/0:10,0:10:24.03:0,24,283	0/0:9,0:9:27.09:0,27,354	0/0:13,0:13:39.13:0,39,513	0/0:5,0:5:12.04:0,12,158	0/0:9,0:9:21.04:0,21,259	0/0:24,0:24:69.22:0,69,907	0/0:12,0:12:29.93:0,30,370	1/1:1,13:14:39.10:418,39,0	1/1:0,21:21:57.14:609,57,0	1/1:1,5:6:12.03:129,12,0	0/0:2,0:2:3.01:0,3,39	0/0:16,0:16:45.15:0,45,591	./.	0/0:20,0:20:57.15:0,57,718	1/1:3,11:14:33.08:355,33,0	1/1:3,19:22:51.09:534,51,0	1/1:0,6:6:15.04:161,15,0
chr10	41924320	.	TTCTCTCTCTC	T	1541.66	PASS	AB=0.881;AC=19;AF=0.380;AN=50;BaseQRankSum=2.920;DP=556;FS=2.298;HRun=0;HaplotypeScore=156.7926;InbreedingCoeff=0.5504;MQ=54.87;MQ0=13;MQRankSum=-3.431;QD=7.91;ReadPosRankSum=-0.644;VQSLOD=2.4172;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:22:14.39:0,14,343	./.	0/0:22,0:11:0.47:0,0,1	./.	0/0:25,0:26:18.06:0,18,456	1/1:17,1:22:9:139,9,0	1/1:20,2:23:5.75:147,6,0	0/0:24,0:23:3.48:0,3,89	0/1:13,5:19:5.91:365,0,6	0/0:20,0:19:18.06:0,18,334	0/0:10,0:10:3.90:0,4,52	1/1:18,1:22:15.02:314,15,0	1/1:21,2:22:9.03:183,9,0	1/1:9,3:12:6.02:177,6,0	0/1:13,0:15:8.69:9,0,377	0/0:18,0:24:29.72:0,30,517	0/0:17,0:18:36.57:0,37,1294	0/1:8,0:8:14.65:15,0,179	0/0:22,0:23:27.45:0,27,739	0/0:18,0:18:5.93:0,6,66	0/0:26,0:25:12.04:0,12,435	1/1:10,6:16:5.93:130,6,0	1/1:12,8:20:3.01:55,3,0	1/1:7,7:14:6.02:177,6,0	0/0:28,0:29:21.06:0,21,359	0/0:17,0:17:18.06:0,18,609	0/0:24,0:24:18.07:0,18,610	./.
chr10	41924368	.	CTGTA	C	2252.38	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=6.663;DP=555;FS=4.144;HRun=0;HaplotypeScore=113.9938;InbreedingCoeff=0.8309;MQ=55.75;MQ0=13;MQRankSum=-2.229;QD=20.11;ReadPosRankSum=1.378;VQSLOD=3.5125;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:44.59:0,45,816	0/0:3,0:3:6.02:0,6,97	0/0:20,0:18:52.37:0,52,929	0/0:18,0:16:47.31:0,47,782	1/1:18,0:18:39.13:604,39,0	0/0:15,0:15:30.16:0,30,435	0/0:26,0:25:48.02:0,48,712	1/1:16,0:14:27.09:413,27,0	0/0:25,0:25:65.37:0,65,948	0/0:24,0:23:49.72:0,50,885	0/0:21,0:20:43.70:0,44,693	0/0:25,0:25:60.13:0,60,880	0/0:23,0:23:46.40:0,46,707	0/0:19,0:19:45.96:0,46,766	0/0:24,0:24:47.99:0,48,730	0/0:38,0:38:67.38:0,67,1078	0/0:22,0:22:52.38:0,52,859	0/0:12,0:12:30.06:0,30,418	1/1:16,0:16:18.06:268,18,0	0/0:4,11:14:0.89:0,1,2	1/1:20,0:19:23.29:334,23,0	0/0:23,0:23:48.16:0,48,770	0/0:21,0:20:36.11:0,36,554	0/0:17,0:17:21.36:0,21,335	0/0:23,0:22:38.62:0,39,593	0/1:15,0:15:74.72:350,0,75	1/1:19,1:17:26.17:381,26,0	1/1:7,0:5:6.02:86,6,0
chr10	41925653	.	AT	A	13068.84	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=8.515;DP=732;FS=4.744;HRun=8;HaplotypeScore=74.8243;InbreedingCoeff=0.9729;MQ=87.85;MQ0=0;MQRankSum=-2.691;QD=24.80;ReadPosRankSum=2.466;VQSLOD=5.7930;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,44:46:99:1072,111,0	0/0:19,0:19:46.13:0,46,609	0/0:24,0:24:54.09:0,54,608	0/0:30,0:30:51.71:0,52,714	0/0:31,0:31:84.26:0,84,1015	1/1:1,23:23:62.94:608,63,0	1/1:4,25:29:72.11:695,72,0	1/1:10,23:33:69.08:660,69,0	1/1:1,26:27:75.12:724,75,0	0/0:30,0:30:81.24:0,81,971	0/0:11,0:11:30.09:0,30,362	1/1:0,25:25:72.12:695,72,0	1/1:5,30:35:84.12:811,84,0	1/1:1,26:27:72.12:695,72,0	0/0:22,0:22:66.20:0,66,797	1/1:1,25:26:69.11:666,69,0	1/1:1,21:22:60.09:579,60,0	0/0:14,0:14:36.11:0,36,435	1/1:3,25:28:75.09:716,75,0	1/1:0,25:25:69.10:665,69,0	1/1:2,26:28:69.11:666,69,0	1/1:1,25:26:66.10:637,66,0	1/1:1,22:23:62.99:607,63,0	1/1:1,42:43:99:1043,108,0	0/0:24,0:24:72.22:0,72,870	1/1:3,32:35:62.96:891,63,0	1/1:1,23:24:63.09:607,63,0	1/1:0,1:1:3:29,3,0
chr10	41926286	.	A	ATT	8766.64	PASS	AB=0.565;AC=47;AF=0.839;AN=56;BaseQRankSum=-4.503;DP=625;FS=21.423;HRun=9;HaplotypeScore=99.9755;InbreedingCoeff=0.8452;MQ=77.70;MQ0=2;MQRankSum=-5.055;QD=15.68;ReadPosRankSum=3.753;VQSLOD=1.7154;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,0:38:41.43:220,41,0	0/0:9,0:9:21.02:0,21,215	0/0:18,0:19:6.06:0,6,232	0/0:14,0:14:32.81:0,33,307	0/0:24,0:24:37.33:0,37,139	1/1:0,11:11:27.09:416,27,0	1/1:3,26:31:75.21:1128,75,0	1/1:2,0:27:62.12:237,62,0	1/1:2,17:20:44.64:655,45,0	1/1:5,0:30:57.22:210,57,0	1/1:4,0:27:51.11:178,51,0	1/1:3,15:19:35.36:491,35,0	1/1:3,16:19:48.16:722,48,0	1/1:5,19:23:45.15:688,45,0	1/1:4,0:27:44.92:154,45,0	1/1:2,0:29:54.90:188,55,0	1/1:2,0:23:42.42:145,42,0	1/1:2,0:11:19.96:68,20,0	1/1:3,0:20:40.80:168,41,0	1/1:7,0:29:26.32:167,26,0	0/1:3,0:13:8.96:46,0,9	1/1:1,15:16:41.97:541,42,0	1/1:3,23:28:59.43:860,59,0	1/1:2,22:24:57.19:878,57,0	1/1:4,0:24:37.43:128,37,0	1/1:3,0:34:72.76:272,73,0	1/1:4,0:28:44.79:154,45,0	1/1:0,0:6:14.97:51,15,0
chr10	41926295	.	T	TA	1713.29	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=-5.767;DP=595;FS=3.749;HRun=2;HaplotypeScore=105.9293;InbreedingCoeff=0.2982;MQ=81.45;MQ0=2;MQRankSum=-1.888;QD=4.69;ReadPosRankSum=3.956;VQSLOD=1.0008;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:37,0:37:38.81:138,0,39	0/0:8,0:8:24.07:0,24,286	0/0:17,0:17:27.59:0,28,386	0/0:16,0:16:32.11:0,32,378	1/1:0,17:17:51.02:641,51,0	0/0:12,0:11:25.17:0,25,117	0/0:30,0:30:69.42:0,69,356	0/1:28,0:28:2.91:85,0,3	0/0:21,0:21:43.41:0,43,242	0/1:29,0:29:75.74:76,0,87	1/1:24,0:24:12.96:138,13,0	0/0:15,0:15:28.81:0,29,163	0/0:22,0:23:47.33:0,47,315	0/0:21,0:20:31.58:0,32,184	1/1:24,0:24:15.89:102,16,0	0/1:30,0:30:47.46:82,0,47	1/1:24,0:24:0.13:87,0,0	0/1:12,0:12:31.91:32,0,37	1/1:17,0:17:8.84:73,9,0	0/1:26,0:25:30.21:102,0,30	0/1:11,0:11:16.29:37,0,16	0/0:16,0:16:38.78:0,39,197	0/0:27,0:27:53.89:0,54,292	0/0:24,0:24:58.56:0,59,284	1/1:21,0:21:9.84:81,10,0	0/1:32,0:32:25.02:82,0,25	0/1:27,0:27:25.35:98,0,25	1/1:6,0:6:14.03:49,14,0
chr10	41927313	.	AG	A	2664.09	PASS	AB=0.749;AC=10;AF=0.179;AN=56;BaseQRankSum=13.749;DP=639;FS=2.626;HRun=1;HaplotypeScore=134.9181;InbreedingCoeff=0.0244;MQ=43.21;MQ0=31;MQRankSum=-11.378;QD=13.52;ReadPosRankSum=-4.820;VQSLOD=1.1969;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:57.66:0,58,759	0/0:7,0:7:15.05:0,15,189	0/0:42,0:12:33.10:0,33,403	0/0:47,0:11:33.09:0,33,399	0/0:30,0:30:57.17:0,57,742	0/1:20,10:26:99:453,0,199	0/1:16,5:20:99:164,0,279	0/0:26,0:26:75.71:0,76,988	0/1:14,9:21:99:411,0,144	0/0:28,0:27:81.26:0,81,1093	0/0:15,0:15:26.16:0,26,326	0/1:9,9:18:99:228,0,140	0/1:14,2:15:99:283,0,132	0/1:9,12:20:50.26:383,0,50	0/0:18,0:18:41.72:0,42,505	0/0:26,0:26:50.97:0,51,592	0/0:24,0:22:51.16:0,51,647	0/0:16,0:15:36.12:0,36,503	0/0:17,0:17:51.17:0,51,674	0/0:29,0:29:66.66:0,67,844	0/0:20,0:19:32.92:0,33,433	1/1:7,13:18:36.35:435,36,0	0/1:20,12:27:99:395,0,154	0/1:12,4:15:63.33:63,0,74	0/0:21,0:21:35.61:0,36,451	0/0:23,0:23:69.21:0,69,926	0/0:15,0:15:33.78:0,34,448	0/0:12,0:11:31.29:0,31,366
chr10	41927316	.	G	GA	2541.44	PASS	AB=0.878;AC=11;AF=0.196;AN=56;BaseQRankSum=14.348;DP=644;FS=5.293;HRun=1;HaplotypeScore=139.2749;InbreedingCoeff=0.1852;MQ=43.64;MQ0=30;MQRankSum=-12.462;QD=12.71;ReadPosRankSum=-2.513;VQSLOD=1.6612;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:57.18:0,57,725	0/0:8,0:8:15.05:0,15,191	0/0:42,0:13:38.94:0,39,440	0/0:47,0:12:33.09:0,33,398	0/0:28,0:28:55.54:0,56,645	0/1:24,6:26:79.73:521,0,80	0/1:18,3:20:99:174,0,144	0/0:27,0:27:78.71:0,79,963	0/1:20,4:22:82.96:374,0,83	0/0:28,0:27:81.13:0,81,916	0/0:13,0:13:20.13:0,20,265	0/1:18,0:18:87.74:208,0,88	0/1:9,7:15:55.57:222,0,56	1/1:20,2:22:8.69:401,9,0	0/0:19,0:19:45.03:0,45,557	0/0:27,0:27:41.40:0,41,441	0/0:24,0:22:50.26:0,50,562	0/0:17,0:16:39.08:0,39,466	0/0:18,0:18:51.07:0,51,584	0/0:32,0:32:72.68:0,73,889	0/0:19,0:18:32.57:0,33,394	1/1:21,0:19:31.39:391,31,0	0/1:29,2:27:76.04:348,0,76	0/1:16,1:16:48.78:60,0,49	0/0:20,0:20:32.51:0,33,418	0/0:23,0:23:65:0,65,770	0/0:16,0:16:35.59:0,36,405	0/0:10,0:9:24.95:0,25,289
chr10	41927319	.	AG	A	4510.79	PASS	AB=0.687;AC=15;AF=0.268;AN=56;BaseQRankSum=14.738;DP=633;FS=9.460;HRun=1;HaplotypeScore=131.1845;InbreedingCoeff=0.7559;MQ=45.91;MQ0=26;MQRankSum=-13.643;QD=23.74;ReadPosRankSum=-0.625;VQSLOD=3.6822;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:57.66:0,58,757	0/0:8,0:8:18.06:0,18,226	0/0:41,0:14:42.05:0,42,506	0/0:49,0:14:39.11:0,39,459	0/0:26,0:26:60.19:0,60,794	1/1:16,15:28:67.08:868,67,0	1/1:8,11:19:44.02:584,44,0	0/0:29,0:29:84.58:0,85,1051	1/1:10,12:22:10.09:516,10,0	0/0:28,0:27:76.19:0,76,911	0/0:13,0:13:20.14:0,20,263	0/1:7,9:16:99:245,0,100	1/1:10,6:15:38.96:510,39,0	1/1:4,17:21:44.79:582,45,0	0/0:22,0:22:53.78:0,54,670	0/0:26,0:26:47.98:0,48,579	0/0:25,0:23:45.74:0,46,592	0/0:17,0:16:36.12:0,36,502	0/0:18,0:18:52.70:0,53,627	0/0:32,0:32:75.70:0,76,970	0/0:18,0:17:32.92:0,33,433	1/1:5,15:19:46.49:584,46,0	0/1:14,15:27:2.07:545,0,2	0/1:11,5:15:17.37:76,0,17	0/0:19,0:19:32.56:0,33,414	0/0:22,0:22:66.13:0,66,880	0/0:16,0:16:38:0,38,496	0/0:10,0:9:24.51:0,25,301
chr10	41927320	.	G	GA	4463.85	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=14.096;DP=639;FS=7.440;HRun=1;HaplotypeScore=134.1540;InbreedingCoeff=0.9026;MQ=46.02;MQ0=25;MQRankSum=-14.007;QD=23.13;ReadPosRankSum=-2.047;VQSLOD=3.7909;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:51.33:0,51,681	0/0:9,0:9:18.06:0,18,228	0/0:41,0:14:40.01:0,40,492	0/0:50,0:15:39.11:0,39,462	0/0:27,0:27:58.58:0,59,712	1/1:24,3:28:71.05:860,71,0	1/1:17,2:20:47.82:467,48,0	0/0:29,0:29:79.76:0,80,955	1/1:18,3:22:24.49:500,24,0	0/0:28,0:27:56.98:0,57,711	0/0:13,0:13:20.11:0,20,265	0/1:17,0:17:33.10:246,0,33	1/1:10,7:16:41.98:445,42,0	1/1:19,1:21:47.93:574,48,0	0/0:22,0:22:54.03:0,54,645	0/0:26,0:26:41.40:0,41,444	0/0:25,0:23:39.31:0,39,543	0/0:17,0:16:36.06:0,36,429	0/0:18,0:18:43.55:0,44,510	0/0:32,0:32:69.39:0,69,884	0/0:18,0:17:32.55:0,33,380	1/1:20,0:19:46.96:584,47,0	1/1:21,7:27:24.42:664,24,0	1/1:11,4:15:9.15:124,9,0	0/0:19,0:19:32.16:0,32,417	0/0:22,0:22:63.22:0,63,728	0/0:17,0:17:35.25:0,35,444	0/0:9,0:9:21.52:0,22,249
chr10	41927345	.	TG	T	5848.44	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=14.793;DP=561;FS=11.541;HRun=3;HaplotypeScore=101.3137;InbreedingCoeff=0.9972;MQ=62.80;MQ0=2;MQRankSum=-10.200;QD=32.31;ReadPosRankSum=1.437;VQSLOD=3.9238;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,1:22:63.17:0,63,882	0/0:9,0:9:27.09:0,27,388	0/0:28,0:22:44.39:0,44,794	0/0:33,1:20:48.12:0,48,613	0/0:23,0:23:66.21:0,66,928	1/1:0,26:26:72.23:891,72,0	1/1:3,15:18:45.02:520,45,0	0/0:24,0:24:69.23:0,69,992	1/1:2,21:23:66.67:806,67,0	0/0:22,0:22:66.20:0,66,905	0/0:10,0:10:30.09:0,30,415	1/1:0,16:16:42.13:520,42,0	1/1:0,17:17:48.15:594,48,0	1/1:1,20:21:57.18:705,57,0	0/0:19,0:19:57.18:0,57,804	0/0:23,0:23:57.19:0,57,818	0/0:22,0:21:63.21:0,63,903	0/0:14,0:14:39.09:0,39,523	0/0:19,0:19:54.16:0,54,742	0/0:31,0:31:93.27:0,93,1281	0/0:15,0:15:42.13:0,42,588	1/1:0,22:22:63.20:779,63,0	1/1:2,20:22:51.15:631,51,0	1/1:1,15:16:33.10:403,33,0	0/0:19,0:19:57.18:0,57,802	0/0:22,0:22:66.20:0,66,904	0/0:19,0:19:57.19:0,57,817	0/0:5,0:5:15.05:0,15,216
chr10	41927441	.	TTAG	T	2176.71	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.997;DP=712;FS=5.479;HRun=0;HaplotypeScore=105.6050;InbreedingCoeff=0.9989;MQ=87.50;MQ0=0;MQRankSum=-4.817;QD=41.07;ReadPosRankSum=1.753;VQSLOD=5.2208;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,23:24:63.21:1045,63,0	0/0:8,0:8:24.08:0,24,568	0/0:30,0:30:90.06:0,90,1902	0/0:27,0:27:58.44:0,58,1614	0/0:30,0:30:90.30:0,90,2051	0/0:18,0:18:54.19:0,54,1274	0/0:24,0:24:69.24:0,69,1630	0/0:32,0:32:96.33:0,96,2219	0/0:29,0:29:81.28:0,81,1865	0/0:24,0:24:72.25:0,72,1676	0/0:17,0:17:51.18:0,51,1199	0/0:29,0:29:84.29:0,84,1961	0/0:23,0:23:66.23:0,66,1525	0/0:31,0:31:84.29:0,84,1983	0/0:30,0:30:90.31:0,90,1967	1/1:0,29:29:72.25:1254,72,0	0/0:27,0:27:81.28:0,81,1862	0/0:14,0:14:39.13:0,39,922	0/0:28,0:28:84.27:0,84,1857	0/0:31,0:31:87.30:0,87,1962	0/0:25,0:25:72.25:0,72,1656	0/0:21,0:21:63.22:0,63,1469	0/0:23,0:23:66.23:0,66,1540	0/0:36,0:36:96.33:0,96,2262	0/0:24,0:23:63.21:0,63,1418	0/0:31,0:31:90.30:0,90,2021	0/0:30,0:28:87.30:0,87,2021	0/0:17,0:17:51.18:0,51,1205
chr10	41929342	.	A	AT	5162.73	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-13.090;DP=540;FS=11.937;HRun=4;HaplotypeScore=50.8404;InbreedingCoeff=0.9992;MQ=87.21;MQ0=0;MQRankSum=-1.352;QD=35.61;ReadPosRankSum=2.074;VQSLOD=4.4299;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:48.10:0,48,531	0/0:10,0:10:27.06:0,27,297	0/0:20,0:20:46.83:0,47,466	0/0:17,0:17:38.17:0,38,418	0/0:33,0:33:96.20:0,96,1064	1/1:1,22:23:63.21:861,63,0	1/1:1,12:13:33.11:451,33,0	0/0:18,0:18:48.11:0,48,521	1/1:0,20:21:57.19:774,57,0	0/0:32,0:32:87.25:0,87,986	0/0:22,0:22:66.17:0,66,739	1/1:1,11:12:30.10:410,30,0	1/1:1,17:18:45.15:615,45,0	1/1:0,20:20:57.19:779,57,0	0/0:12,0:12:36.10:0,36,408	0/0:14,0:14:39.11:0,39,442	0/0:25,0:25:66.17:0,66,737	0/0:12,0:12:33.09:0,33,374	0/0:25,0:25:72.20:0,72,816	0/0:31,0:31:93.25:0,93,1045	0/0:12,0:12:36.10:0,36,408	1/1:2,11:13:30.10:410,30,0	1/1:1,14:15:39.13:533,39,0	1/1:1,9:10:24.08:328,24,0	0/0:27,0:27:81.23:0,81,918	0/0:26,0:26:72.16:0,72,784	0/0:22,0:22:63.18:0,63,713	0/0:19,0:19:48.14:0,48,544
chr10	41930331	.	TCC	T	8723.36	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=17.968;DP=697;FS=2.201;HRun=3;HaplotypeScore=109.9501;InbreedingCoeff=0.9997;MQ=87.50;MQ0=0;MQRankSum=-2.621;QD=39.12;ReadPosRankSum=4.574;VQSLOD=4.6250;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:90.27:0,90,1700	0/0:17,0:17:51.17:0,51,985	0/0:23,0:23:69.24:0,69,1295	0/0:25,0:25:72.21:0,72,1302	0/0:31,0:31:90.31:0,90,1730	1/1:2,37:39:96.33:1470,96,0	1/1:1,21:22:54.18:827,54,0	0/0:38,0:38:99:0,111,2063	1/1:0,21:21:48.16:735,48,0	0/0:35,0:35:99:0,105,2029	0/0:19,0:18:54.19:0,54,1043	1/1:0,22:22:66.22:1011,66,0	1/1:1,18:19:48.16:735,48,0	1/1:1,22:23:60.20:919,60,0	0/0:24,0:24:72.24:0,72,1348	0/0:26,0:26:78.27:0,78,1495	0/0:25,0:25:75.26:0,75,1449	0/0:16,0:16:48.16:0,48,925	0/0:22,0:22:66.23:0,66,1252	0/0:32,1:33:44.36:0,44,1615	0/0:24,0:24:72.25:0,72,1391	1/1:0,31:31:81.27:1233,81,0	1/1:2,20:22:54.18:827,54,0	1/1:0,24:24:63.21:965,63,0	0/0:16,0:16:48.15:0,48,866	0/0:26,0:26:78.27:0,78,1502	0/0:31,0:31:93.32:0,93,1787	0/0:12,0:12:24.08:0,24,464
chr10	41930624	.	CT	C	8458.67	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=15.044;DP=747;FS=2.505;HRun=3;HaplotypeScore=70.6447;InbreedingCoeff=0.9998;MQ=89.54;MQ0=0;MQRankSum=-6.027;QD=36.94;ReadPosRankSum=3.834;VQSLOD=5.4438;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:60,0:60:99:0,181,2861	0/0:19,0:19:57.19:0,57,911	0/0:29,0:29:84.01:0,84,1221	0/0:27,0:27:78.23:0,78,1181	0/0:26,0:26:78.27:0,78,1241	1/1:0,12:12:30.10:419,30,0	1/1:0,23:23:63.21:880,63,0	0/0:29,0:29:87.28:0,87,1350	1/1:0,22:22:54.18:753,54,0	0/0:22,0:22:63.21:0,63,986	0/0:30,0:30:90.29:0,90,1414	1/1:0,30:30:81.27:1132,81,0	1/1:0,31:31:84.28:1172,84,0	1/1:0,28:28:72.24:1001,72,0	0/0:27,0:27:81.25:0,81,1247	0/0:31,0:31:93.30:0,93,1460	0/0:34,0:34:99:0,102,1605	0/0:12,0:12:33.07:0,33,499	0/0:20,0:20:60.20:0,60,959	0/0:29,0:29:87.30:0,87,1387	0/0:32,0:32:93.29:0,93,1431	1/1:0,31:31:78.26:1089,78,0	1/1:0,20:20:57.66:797,58,0	1/1:0,32:32:87.29:1215,87,0	0/0:28,0:28:84.27:0,84,1320	0/0:21,0:21:63.21:0,63,987	0/0:31,0:31:93.32:0,93,1486	0/0:11,0:11:33.11:0,33,527
chr10	41932303	.	CACTCTAACCA	C	11201.33	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=8.191;DP=509;FS=12.015;HRun=0;HaplotypeScore=168.1426;InbreedingCoeff=0.9916;MQ=83.86;MQ0=0;MQRankSum=-15.119;QD=72.74;ReadPosRankSum=5.214;VQSLOD=3.6170;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:24.08:0,24,1083	0/0:11,0:11:33.11:0,33,1619	0/0:19,0:18:52.99:0,53,1928	0/0:20,0:18:45.15:0,45,1395	0/0:35,0:35:99:0,102,4097	1/1:2,27:29:78.27:2515,78,0	1/1:0,13:13:27.09:915,27,0	0/0:27,0:27:72.25:0,72,2645	1/1:0,15:15:39.13:1321,39,0	0/0:19,0:19:54.19:0,54,2320	0/0:15,0:15:45.15:0,45,1784	1/1:3,8:11:24.08:804,24,0	1/1:4,15:19:42.14:1382,42,0	1/1:2,16:18:42.14:1395,42,0	0/0:22,0:22:38.85:0,39,1370	0/0:10,0:10:27.08:0,27,1128	0/0:16,0:15:33.11:0,33,1412	0/0:5,0:5:15.05:0,15,570	0/0:16,0:16:48.15:0,48,1744	0/0:23,0:23:69.24:0,69,2755	0/0:18,0:18:48.14:0,48,1785	1/1:3,16:19:45.14:1393,45,0	1/1:4,17:22:33.09:1071,33,0	1/1:1,7:8:12.04:407,12,0	0/0:26,0:26:51.17:0,51,1822	0/0:17,0:17:48.16:0,48,1892	0/0:30,0:30:74.30:0,74,2681	0/0:13,0:13:39.13:0,39,1459
chr10	41932304	.	ACTCTAACC	A	8148.82	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=13.446;DP=500;FS=15.125;HRun=0;HaplotypeScore=158.3143;InbreedingCoeff=0.9281;MQ=83.67;MQ0=0;MQRankSum=-14.896;QD=48.22;ReadPosRankSum=4.836;VQSLOD=3.8734;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:27.09:0,27,1040	0/0:11,0:11:33.11:0,33,1411	0/0:19,0:18:52.99:0,53,1739	0/0:19,0:17:45.15:0,45,1288	0/0:34,0:34:99:0,102,3812	1/1:27,2:29:78.25:1865,78,0	1/1:13,0:13:27.09:640,27,0	0/0:27,0:27:75.26:0,75,2624	1/1:15,0:15:39.13:925,39,0	0/0:20,0:20:55.42:0,55,1970	0/0:15,0:15:43.85:0,44,1456	1/1:11,0:11:24.08:561,24,0	1/1:15,2:17:42.14:1047,42,0	1/1:18,0:18:42.14:1030,42,0	0/1:23,0:23:5.90:6,0,1127	0/0:10,0:10:27.08:0,27,932	0/0:16,0:15:33.11:0,33,1241	0/0:5,0:5:15.05:0,15,486	0/0:16,0:16:48.15:0,48,1666	0/0:24,0:24:72.25:0,72,2653	0/0:18,0:18:48.14:0,48,1701	1/1:17,0:17:45.15:975,45,0	1/1:18,1:19:33.11:815,33,0	1/1:7,0:7:12.04:285,12,0	0/0:25,0:25:49.20:0,49,1520	0/0:16,0:16:48.16:0,48,1761	0/0:29,0:29:74.55:0,75,2507	0/0:13,0:13:39.13:0,39,1374
chr10	41932312	.	CA	C	3860.63	PASS	AB=1.000;AC=35;AF=0.625;AN=56;BaseQRankSum=-0.427;DP=550;FS=7.915;HRun=11;HaplotypeScore=126.3125;InbreedingCoeff=0.8600;MQ=79.52;MQ0=0;MQRankSum=-2.932;QD=10.88;ReadPosRankSum=6.398;VQSLOD=1.9476;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:3,0:19:17.04:0,17,85	0/0:11,1:12:4.64:0,5,239	0/1:16,0:15:27.86:28,0,138	0/0:20,0:18:14.95:0,15,142	1/1:6,33:39:74.74:615,75,0	1/1:29,0:29:50.32:177,50,0	1/1:13,0:13:22.46:77,22,0	1/1:4,21:25:58.70:467,59,0	1/1:16,0:16:32.32:112,32,0	0/0:13,0:28:55.38:0,55,347	0/0:5,0:23:57.36:0,57,300	1/1:13,0:13:18.32:61,18,0	1/1:18,0:18:26.72:94,27,0	1/1:17,1:18:29.62:103,30,0	0/0:9,0:30:28.95:0,29,163	0/0:1,0:11:22.73:0,23,114	0/0:3,0:19:22.76:0,23,115	0/0:1,0:4:8.66:0,9,50	1/1:7,5:15:3.62:161,4,0	1/1:6,23:29:27.88:436,28,0	1/1:2,18:20:38.93:319,39,0	1/1:17,0:17:27.28:95,27,0	1/1:20,0:20:21.95:75,22,0	1/1:8,0:8:11.80:40,12,0	0/0:11,0:28:31.28:0,31,169	1/1:5,16:22:40.69:311,41,0	1/1:2,23:25:50.67:418,51,0	1/1:0,12:12:32.96:271,33,0
chr10	41932604	.	G	GT	16344.72	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-6.575;DP=674;FS=3.989;HRun=3;HaplotypeScore=72.3720;InbreedingCoeff=0.9975;MQ=83.64;MQ0=0;MQRankSum=-3.714;QD=37.32;ReadPosRankSum=4.035;VQSLOD=5.3597;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:72.18:0,72,839	0/0:13,0:13:36.11:0,36,431	0/0:24,0:24:68.42:0,68,788	0/0:18,0:18:48.14:0,48,568	1/1:1,28:29:75.21:1028,75,0	1/1:2,20:22:60.20:840,60,0	1/1:1,11:12:33.11:462,33,0	1/1:3,46:49:99:1907,138,0	1/1:2,21:24:63.21:866,63,0	0/0:32,0:32:87.27:0,87,1043	0/0:25,0:25:69.19:0,69,815	1/1:1,20:21:54.18:756,54,0	1/1:3,31:35:84.10:1173,84,0	1/1:1,31:32:84.28:1176,84,0	0/0:21,0:21:63.18:0,63,743	0/0:21,0:21:63.16:0,63,724	0/0:24,0:24:66.15:0,66,764	0/0:6,0:6:15.05:0,15,180	1/1:2,16:18:48.15:658,48,0	1/1:0,38:38:99:1592,114,0	1/1:1,19:20:57.19:798,57,0	1/1:0,20:20:60.11:795,60,0	1/1:2,23:25:63.21:881,63,0	1/1:0,10:10:27.09:378,27,0	0/0:26,0:26:69.02:0,69,769	1/1:3,30:33:54.28:1145,54,0	1/1:1,37:37:99:1386,99,0	1/1:0,12:12:36.12:504,36,0
chr10	41935753	.	T	TACAC	4985.57	PASS	AB=0.729;AC=39;AF=0.780;AN=50;BaseQRankSum=0.439;DP=578;FS=9.337;HRun=0;HaplotypeScore=127.3069;InbreedingCoeff=-0.1186;MQ=62.18;MQ0=12;MQRankSum=-2.135;QD=9.51;ReadPosRankSum=-0.716;VQSLOD=3.3310;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:25,7:37:2.73:18,3,0	0/0:6,0:6:0:0,0,0	./.	./.	0/1:11,1:15:0:0,0,0	0/1:12,3:19:37.79:99,0,38	1/1:15,6:25:11.64:206,12,0	1/1:24,0:23:8.76:106,9,0	1/1:13,4:19:20.98:349,21,0	0/1:13,0:23:72.64:73,0,179	0/1:10,0:15:41.38:41,0,74	0/1:12,8:26:13.15:210,0,13	1/1:13,10:28:18.83:236,19,0	1/1:21,4:25:30.56:564,31,0	0/1:13,0:24:28.89:29,0,102	1/1:7,12:21:17.80:366,18,0	1/1:9,6:20:23.73:403,24,0	1/1:14,0:18:16.72:85,17,0	1/1:16,5:23:25.53:432,26,0	1/1:7,6:16:5.75:83,6,0	1/1:37,2:39:16.06:226,16,0	1/1:17,3:20:12.03:236,12,0	1/1:8,5:13:6.02:142,6,0	0/1:14,6:21:16.98:490,0,17	0/1:7,0:13:12.96:13,0,63	1/1:21,0:21:28.65:382,29,0	0/1:10,4:16:26.97:199,0,27	./.
chr10	41935848	.	AC	A	8354.06	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=11.066;DP=714;FS=9.720;HRun=1;HaplotypeScore=96.5634;InbreedingCoeff=0.9993;MQ=64.75;MQ0=0;MQRankSum=-0.637;QD=37.13;ReadPosRankSum=0.963;VQSLOD=4.4909;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:96.31:0,96,1507	0/0:8,0:8:24.07:0,24,359	0/0:23,2:22:60.20:0,60,886	0/0:33,1:29:74.83:0,75,954	0/0:19,0:19:39.13:0,39,622	1/1:0,25:25:72.24:1007,72,0	1/1:0,31:31:81.27:1133,81,0	0/0:39,0:39:99:0,117,1805	1/1:2,27:29:49:1080,49,0	0/0:23,0:23:66.22:0,66,1039	0/0:15,0:15:39.13:0,39,615	1/1:0,25:25:72.24:1007,72,0	1/1:1,23:24:63.17:859,63,0	1/1:0,35:35:99:1383,99,0	0/0:25,0:25:72.25:0,72,1150	0/0:35,0:35:99:0,102,1627	0/0:22,0:22:66.22:0,66,1027	0/0:24,0:24:72.25:0,72,1143	0/0:19,0:19:57.17:0,57,867	0/0:14,0:14:36.12:0,36,574	0/0:61,0:61:99:0,148,2346	1/1:0,19:19:42.14:587,42,0	1/1:0,17:17:42.14:586,42,0	1/1:1,19:20:51.17:713,51,0	0/0:16,0:16:48.16:0,48,766	0/0:30,0:30:90.28:0,90,1393	0/0:30,0:29:90.20:0,90,1403	0/0:9,0:9:24.08:0,24,383
chr10	41936118	.	ATTTTTTGGTTTTT	A	9638.59	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=-1.207;DP=482;FS=4.030;HRun=0;HaplotypeScore=228.4855;InbreedingCoeff=0.8893;MQ=68.56;MQ0=3;MQRankSum=-8.351;QD=60.62;ReadPosRankSum=4.943;VQSLOD=4.5216;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:45.14:0,45,2619	0/0:4,0:4:9.03:0,9,568	0/0:32,0:17:40.09:0,40,1313	0/0:22,0:14:36.29:0,36,1056	0/0:20,0:20:24.41:0,24,785	1/1:4,15:19:30.10:1150,30,0	1/1:2,9:11:15.05:534,15,0	0/1:24,0:24:19.91:20,0,1063	1/1:0,15:15:33.11:1265,33,0	0/0:20,0:20:47.17:0,47,1816	0/0:23,0:23:60.16:0,60,2381	1/1:4,14:18:27.09:1035,27,0	1/1:1,19:20:42.14:1610,42,0	1/1:0,9:9:15.05:575,15,0	0/0:13,0:13:27.09:0,27,1206	0/0:12,0:12:30.09:0,30,1447	0/0:28,0:28:57.20:0,57,2247	0/0:10,0:10:21.07:0,21,997	0/0:21,0:21:17.33:0,17,697	0/0:25,0:24:51.42:0,51,1042	0/0:6,0:6:11.40:0,11,247	1/1:2,14:16:39.13:1495,39,0	1/1:1,20:21:42.18:1610,42,0	1/1:2,4:6:8.93:345,9,0	0/0:14,0:14:24.08:0,24,1085	0/0:24,0:24:33.71:0,34,898	0/0:25,0:25:67.01:0,67,996	0/0:7,0:8:21.06:0,21,340
chr10	41936124	.	TG	T	6186.66	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=5.491;DP=468;FS=7.072;HRun=2;HaplotypeScore=143.4939;InbreedingCoeff=0.9110;MQ=69.81;MQ0=3;MQRankSum=-6.333;QD=16.59;ReadPosRankSum=4.850;VQSLOD=4.8910;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:45.11:0,45,597	0/0:5,0:5:14.75:0,15,148	0/0:33,0:18:38.86:0,39,361	0/0:25,1:17:35.01:0,35,317	1/1:6,12:19:43.48:324,43,0	1/1:17,0:16:27.45:124,27,0	1/1:9,0:9:13.95:70,14,0	1/1:16,6:22:41.77:338,42,0	1/1:15,0:15:30.19:137,30,0	1/1:1,20:21:59.07:627,59,0	1/1:0,22:22:62.86:706,63,0	1/1:15,0:15:24.70:112,25,0	1/1:19,0:19:38.42:174,38,0	1/1:9,0:9:13.72:62,14,0	1/1:0,13:13:27.09:343,27,0	0/0:11,1:12:5.04:0,5,354	1/1:26,1:27:59.83:481,60,0	1/1:1,9:10:17.72:229,18,0	1/1:7,7:15:33.52:260,34,0	1/1:8,16:24:48.95:381,49,0	1/1:6,0:6:5.68:39,6,0	1/1:15,0:15:35.68:162,36,0	1/1:20,0:20:38.42:174,38,0	1/1:5,0:5:8.14:37,8,0	1/1:0,14:15:24.08:309,24,0	1/1:8,13:21:59.08:499,59,0	1/1:10,15:25:56.83:447,57,0	1/1:3,5:8:17.97:151,18,0
chr10	41936125	.	GGT	G	5295.63	PASS	AB=1.000;AC=43;AF=0.768;AN=56;BaseQRankSum=7.128;DP=460;FS=11.231;HRun=0;HaplotypeScore=151.2520;InbreedingCoeff=0.8337;MQ=70.01;MQ0=3;MQRankSum=-6.665;QD=14.75;ReadPosRankSum=6.878;VQSLOD=3.6261;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:46.02:0,46,816	0/0:5,0:5:15.05:0,15,274	0/0:35,0:18:28.33:0,28,509	0/0:26,0:17:40.36:0,40,406	1/1:19,0:19:29.49:276,29,0	1/1:15,0:14:29.56:186,30,0	1/1:9,0:9:14.79:94,15,0	1/1:21,0:21:33.69:310,34,0	1/1:15,0:15:32.52:205,33,0	1/1:21,0:21:7.22:148,7,0	1/1:22,0:22:32.39:174,32,0	1/1:14,0:14:26.60:167,27,0	1/1:19,0:19:41.38:260,41,0	1/1:9,0:9:14.77:93,15,0	1/1:13,0:13:18.64:55,19,0	0/0:12,0:12:33.54:0,34,547	1/1:1,25:26:59.37:892,59,0	0/1:10,0:10:6.57:22,0,7	1/1:15,0:15:30.98:279,31,0	1/1:25,0:24:44.26:416,44,0	0/0:6,0:6:0.82:0,1,2	1/1:14,0:14:38.41:242,38,0	1/1:20,0:20:41.36:260,41,0	1/1:5,0:5:8.77:56,9,0	1/1:15,0:15:17.76:53,18,0	1/1:21,0:21:53.26:496,53,0	1/1:23,0:23:36.79:460,37,0	1/1:8,0:8:14.07:153,14,0
chr10	41936132	.	TTTTTTG	T	7054.49	PASS	AB=1.000;AC=26;AF=0.464;AN=56;BaseQRankSum=14.391;DP=492;FS=0.000;HRun=0;HaplotypeScore=191.6058;InbreedingCoeff=0.4269;MQ=68.95;MQ0=3;MQRankSum=-14.229;QD=24.16;ReadPosRankSum=4.211;VQSLOD=4.1210;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:44.55:0,45,1253	0/0:5,0:5:15.05:0,15,490	0/0:34,0:19:36.12:0,36,739	0/0:26,0:17:35.93:0,36,612	1/1:18,1:19:24.36:594,24,0	0/1:19,0:18:28.81:289,0,29	0/1:12,0:12:46.23:112,0,46	1/1:21,2:23:33.41:429,33,0	1/1:15,0:15:33.09:363,33,0	0/0:20,0:20:41.97:0,42,1055	0/0:23,0:23:57.20:0,57,1322	0/1:16,0:16:9.78:264,0,10	0/1:21,0:21:9.57:416,0,10	1/1:9,0:9:15.04:166,15,0	0/0:14,0:14:33.11:0,33,737	0/0:12,0:12:33.11:0,33,936	0/0:25,0:25:60.20:0,60,1018	0/0:10,0:10:21.07:0,21,535	1/1:17,0:17:38.99:573,39,0	1/1:27,0:26:45.95:767,46,0	1/1:8,0:8:2.90:18,3,0	1/1:15,0:15:7.83:398,8,0	0/1:25,0:25:90.62:408,0,91	0/1:6,0:7:32.79:85,0,33	0/0:14,0:14:24.08:0,24,551	0/1:24,0:24:20.27:784,0,20	1/1:21,2:23:60.03:1066,60,0	0/1:12,0:12:2.42:324,0,2
chr10	41936133	.	TTTTTG	T	5469.15	PASS	AB=0.951;AC=27;AF=0.482;AN=56;BaseQRankSum=14.379;DP=494;FS=1.271;HRun=0;HaplotypeScore=190.0857;InbreedingCoeff=0.4874;MQ=68.75;MQ0=3;MQRankSum=-14.024;QD=18.60;ReadPosRankSum=4.363;VQSLOD=4.2544;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:43.87:0,44,1081	0/0:5,0:5:15.05:0,15,423	0/0:34,0:19:38.92:0,39,588	0/0:26,0:17:25.51:0,26,492	1/1:10,11:21:28.11:438,28,0	0/1:19,0:18:28.79:222,0,29	0/1:12,0:12:46.61:85,0,47	1/1:20,3:23:35.74:391,36,0	1/1:15,0:15:33:289,33,0	0/0:21,0:21:44.88:0,45,907	0/0:23,0:23:57.16:0,57,1073	0/1:16,0:16:9.78:204,0,10	1/1:21,0:21:6.18:329,6,0	0/1:10,0:10:4.88:114,0,5	0/0:14,0:14:33.11:0,33,611	0/0:11,0:11:33.10:0,33,791	0/0:25,0:25:60.17:0,60,759	0/0:10,0:10:21.07:0,21,443	1/1:11,6:17:38.90:466,39,0	1/1:12,15:26:49.56:617,50,0	1/1:8,0:8:9.36:59,9,0	1/1:15,0:15:26.03:330,26,0	0/1:25,0:25:57.37:315,0,57	0/1:7,0:7:32.72:65,0,33	0/0:14,0:14:24.08:0,24,450	0/1:11,12:23:11.06:562,0,11	1/1:9,14:23:54.16:735,54,0	1/1:7,5:12:5.21:247,5,0
chr10	41936134	.	TTTTG	T	4122.03	PASS	AB=1.000;AC=26;AF=0.464;AN=56;BaseQRankSum=14.453;DP=490;FS=2.325;HRun=0;HaplotypeScore=187.4473;InbreedingCoeff=0.4352;MQ=69.56;MQ0=3;MQRankSum=-13.156;QD=13.97;ReadPosRankSum=4.533;VQSLOD=2.9087;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:44.84:0,45,920	0/0:5,0:5:15.05:0,15,358	0/0:34,0:20:31.10:0,31,518	0/0:25,0:17:16.98:0,17,415	1/1:21,1:22:37.11:378,37,0	0/1:19,0:18:29.07:157,0,29	0/1:12,0:12:46.63:58,0,47	1/1:21,1:22:27.02:279,27,0	1/1:15,0:15:32.62:216,33,0	0/0:19,0:19:44.81:0,45,740	0/0:22,0:22:57.07:0,57,858	0/1:16,0:16:10.01:145,0,10	1/1:21,0:21:5.78:236,6,0	0/1:11,0:11:26.80:79,0,27	0/0:14,0:14:32.90:0,33,484	0/0:11,0:11:33.08:0,33,658	0/0:25,0:25:59.90:0,60,521	0/0:10,0:10:21.07:0,21,354	1/1:16,2:18:35.44:362,35,0	1/1:23,2:24:33.19:450,33,0	1/1:8,0:8:5.66:40,6,0	1/1:15,0:15:25.64:245,26,0	0/1:25,0:25:57.61:223,0,58	0/1:7,0:7:32.74:45,0,33	0/0:12,0:12:23.87:0,24,345	0/1:22,0:22:7.93:426,0,8	1/1:23,0:23:43.90:569,44,0	0/1:14,0:14:2.07:216,0,2
chr10	41936149	.	AGCAG	A	7840.73	PASS	AB=0.511;AC=15;AF=0.268;AN=56;BaseQRankSum=4.283;DP=467;FS=12.244;HRun=0;HaplotypeScore=175.1408;InbreedingCoeff=0.9059;MQ=74.77;MQ0=0;MQRankSum=-11.597;QD=51.58;ReadPosRankSum=0.065;VQSLOD=5.1820;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:36.12:0,36,1005	0/0:7,0:7:21.07:0,21,608	0/0:16,0:12:33.11:0,33,830	0/0:22,0:21:53.74:0,54,1236	1/1:0,24:24:48.63:918,49,0	0/0:25,0:24:72.25:0,72,1930	0/0:13,0:13:30.10:0,30,752	1/1:0,20:20:60.18:1217,60,0	0/0:16,0:16:45.15:0,45,1264	0/0:16,0:16:48.16:0,48,1387	0/0:21,0:21:60.21:0,60,1737	0/0:14,0:14:39.13:0,39,1014	0/0:19,0:19:51.17:0,51,1264	0/0:13,0:13:36.12:0,36,1001	0/0:17,0:17:45.15:0,45,1290	0/0:17,0:17:51.18:0,51,1439	0/0:21,0:21:54.19:0,54,1566	0/0:7,0:7:21.07:0,21,608	1/1:0,18:18:51.15:993,51,0	1/1:1,24:24:57.15:1098,57,0	1/1:0,6:6:15.05:244,15,0	0/0:16,0:16:48.16:0,48,1146	0/0:24,0:24:63.11:0,63,1652	0/0:6,0:6:18.06:0,18,506	0/0:10,0:10:24.08:0,24,681	0/1:1,23:24:14.75:1325,0,15	1/1:0,24:24:66.23:1355,66,0	1/1:0,11:11:33.11:691,33,0
chr10	41937403	.	A	AATGTATGT	11865.75	PASS	AB=1.000;AC=40;AF=0.714;AN=56;BaseQRankSum=-3.177;DP=716;FS=12.779;HRun=0;HaplotypeScore=275.9492;InbreedingCoeff=0.7986;MQ=61.21;MQ0=4;MQRankSum=1.769;QD=20.89;ReadPosRankSum=2.734;VQSLOD=2.2104;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:29.06:0,29,542	0/0:8,0:8:15.05:0,15,385	0/0:21,0:15:15:0,15,197	0/0:22,0:17:15.44:0,15,182	0/0:33,0:33:43.01:0,43,719	1/1:22,0:22:41.69:379,42,0	1/1:25,0:25:25.85:200,26,0	1/1:65,0:65:63.54:1384,64,0	1/1:24,0:24:10.17:226,10,0	1/1:44,0:44:46.51:801,47,0	1/1:21,0:21:34.01:318,34,0	1/1:23,0:23:45.85:524,46,0	1/1:32,0:31:59.87:493,60,0	0/1:25,0:25:12.09:297,0,12	1/1:40,0:40:22.07:323,22,0	0/0:30,0:30:39.06:0,39,816	0/0:15,0:15:21:0,21,255	0/1:15,0:15:20.08:228,0,20	1/1:13,0:12:21.03:472,21,0	1/1:35,7:42:72.16:1912,72,0	1/1:27,0:27:15.05:439,15,0	1/1:29,0:29:70.59:851,71,0	1/1:36,0:36:71.80:617,72,0	1/1:18,0:18:30.04:247,30,0	1/1:19,0:19:30.87:190,31,0	1/1:18,4:22:15.25:1050,15,0	1/1:11,4:15:24.04:715,24,0	1/1:11,0:10:8.99:200,9,0
chr10	41937423	.	TATGC	T	6981.67	PASS	AB=0.904;AC=31;AF=0.554;AN=56;BaseQRankSum=-4.685;DP=765;FS=20.977;HRun=0;HaplotypeScore=279.8615;InbreedingCoeff=0.0376;MQ=51.77;MQ0=4;MQRankSum=1.191;QD=10.68;ReadPosRankSum=-5.630;VQSLOD=2.0707;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:26.23:0,26,342	0/0:12,0:12:33.04:0,33,600	0/0:18,0:8:15.89:0,16,204	0/0:22,0:11:16.95:0,17,202	0/1:31,0:31:18.99:19,0,381	0/1:22,0:22:1.24:246,0,1	1/1:17,3:20:12.49:188,12,0	0/1:18,52:70:99:1305,0,251	0/1:18,1:19:3.86:173,0,4	1/1:41,1:42:12.06:516,12,0	0/1:23,1:24:22.13:202,0,22	1/1:18,1:19:20.15:299,20,0	1/1:39,1:39:14.40:301,14,0	0/1:25,2:27:42.11:208,0,42	0/1:36,1:37:60.49:194,0,60	0/0:23,0:23:24.80:0,25,298	0/0:13,0:13:0.83:0,1,182	1/1:15,2:17:4.94:240,5,0	0/1:16,1:16:35.71:299,0,36	0/1:49,3:52:40.66:583,0,41	0/1:10,20:30:71.99:98,0,72	1/1:34,2:36:24.83:567,25,0	1/1:36,2:38:17.53:417,18,0	1/1:20,0:20:18.58:226,19,0	1/1:22,0:22:12.50:123,12,0	0/1:28,3:31:99:412,0,111	0/1:26,1:27:99:208,0,128	0/1:13,0:12:17.02:159,0,17
chr10	41937427	.	C	CATGT	3734.96	PASS	AB=0.959;AC=17;AF=0.304;AN=56;BaseQRankSum=-9.267;DP=757;FS=4.761;HRun=0;HaplotypeScore=316.6165;InbreedingCoeff=0.3187;MQ=51.01;MQ0=4;MQRankSum=-3.164;QD=10.09;ReadPosRankSum=-8.351;VQSLOD=0.8941;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:23.02:0,23,321	0/0:11,0:11:33.11:0,33,547	0/1:18,0:7:4.20:4,0,23	0/0:18,0:8:5.66:0,6,32	0/0:30,0:30:32.94:0,33,222	0/0:22,0:22:19.81:0,20,249	0/1:20,0:20:11.11:11,0,124	1/1:68,0:68:84.43:1157,84,0	0/0:18,0:18:23.44:0,23,224	0/0:39,0:39:40.99:0,41,568	0/1:23,0:23:2.38:2,0,206	0/0:19,0:19:19.54:0,20,277	0/0:41,0:40:31.59:0,32,423	0/0:26,0:26:40.23:0,40,377	0/0:35,0:35:40.98:0,41,506	0/0:22,0:22:37.85:0,38,510	0/1:12,0:12:13.10:13,0,33	0/1:17,0:17:39.02:39,0,50	0/1:17,0:16:14.36:289,0,14	1/1:49,7:56:49.33:793,49,0	0/1:27,0:27:18.48:100,0,18	0/1:37,0:37:49.13:49,0,339	0/0:39,0:39:33.16:0,33,481	0/0:19,0:19:14.74:0,15,208	0/0:23,0:23:13.32:0,13,254	1/1:17,13:31:18.37:558,18,0	0/1:13,16:31:0.76:351,0,1	1/1:13,0:12:19.82:368,20,0
chr10	41937438	.	GCATGTATA	G	9819.18	PASS	AB=0.955;AC=28;AF=0.500;AN=56;BaseQRankSum=-14.709;DP=757;FS=8.049;HRun=0;HaplotypeScore=318.5728;InbreedingCoeff=-0.5789;MQ=50.58;MQ0=3;MQRankSum=-3.634;QD=13.69;ReadPosRankSum=-8.819;VQSLOD=1.1665;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:21,0:21:6.15:301,0,6	0/0:13,0:13:39.12:0,39,1361	0/0:12,0:4:9.02:0,9,137	0/0:14,0:4:7:0,7,50	1/1:0,30:30:42.07:873,42,0	0/1:17,1:18:99:219,0,271	0/1:18,0:18:99:563,0,111	0/1:67,0:67:99:494,0,702	0/1:18,1:19:99:360,0,193	0/1:35,5:41:99:721,0,457	0/1:22,4:26:99:317,0,269	0/1:22,1:23:99:177,0,280	0/1:33,5:37:99:482,0,398	0/1:23,3:26:99:348,0,457	0/1:32,0:32:99:237,0,536	1/1:21,0:21:38.82:829,39,0	1/1:7,3:10:18.05:347,18,0	0/1:13,1:14:36.47:353,0,36	0/1:19,0:19:99:117,0,398	0/1:61,0:61:99:233,0,815	0/1:29,0:29:99:116,0,229	0/1:37,2:39:99:956,0,474	0/1:34,3:37:99:492,0,472	0/1:17,1:18:99:146,0,191	0/1:19,4:23:99:377,0,218	0/1:35,0:35:99:316,0,824	0/1:38,0:38:99:374,0,547	0/1:14,0:14:71.89:72,0,117
chr10	41937439	.	CATGTATAT	C	5957.62	PASS	AB=1.000;AC=28;AF=0.500;AN=56;BaseQRankSum=-11.700;DP=758;FS=10.794;HRun=0;HaplotypeScore=333.3234;InbreedingCoeff=-0.4604;MQ=50.55;MQ0=3;MQRankSum=-5.925;QD=8.45;ReadPosRankSum=-4.635;VQSLOD=1.7016;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:6,15:21:17.92:429,18,0	0/0:13,0:13:36.12:0,36,1384	0/0:11,0:3:6.02:0,6,128	0/0:15,0:4:6.01:0,6,59	1/1:30,0:30:38.92:632,39,0	0/1:19,0:19:99:105,0,534	0/1:18,0:18:99:389,0,232	0/1:68,0:68:43.52:44,0,1599	0/1:18,0:18:99:208,0,396	0/1:41,0:41:99:426,0,1117	0/1:26,0:26:99:148,0,476	0/1:23,0:23:64.15:64,0,658	0/1:38,0:37:99:266,0,861	0/1:26,0:26:99:231,0,828	0/1:32,0:32:99:137,0,951	1/1:1,20:21:38.82:1062,39,0	1/1:10,0:10:14.95:217,15,0	0/1:14,0:14:99:197,0,122	0/1:19,0:19:13.89:14,0,688	0/1:62,0:62:15.85:16,0,1369	0/1:27,0:27:34.94:35,0,311	0/1:40,0:40:99:602,0,929	0/1:37,0:37:99:255,0,971	0/1:18,0:18:63.74:64,0,422	0/1:23,0:23:99:243,0,517	0/1:35,0:35:30.89:31,0,1261	0/1:39,0:39:99:143,0,834	0/0:14,0:14:11.93:0,12,323
chr10	41937539	.	T	TTATG	19847.19	PASS	AB=0.993;AC=42;AF=0.750;AN=56;BaseQRankSum=2.713;DP=826;FS=0.338;HRun=0;HaplotypeScore=186.0900;InbreedingCoeff=0.2605;MQ=57.03;MQ0=1;MQRankSum=-7.996;QD=25.84;ReadPosRankSum=-1.919;VQSLOD=4.2830;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:12:9.03:191,9,0	0/0:16,0:16:36.12:0,36,592	0/1:14,0:10:0.56:1,0,85	0/0:10,0:8:5.81:0,6,63	0/0:31,0:31:78.24:0,78,1230	1/1:8,10:18:27.09:646,27,0	1/1:1,12:13:33.11:807,33,0	0/1:71,0:68:99:339,0,718	1/1:8,16:25:42.14:1010,42,0	1/1:38,0:38:90.73:1766,91,0	1/1:29,0:29:57.18:1192,57,0	1/1:9,21:30:63.22:1530,63,0	1/1:10,29:40:81.28:1930,81,0	1/1:9,24:36:72.14:1731,72,0	1/1:43,0:45:81.22:1757,81,0	1/1:28,0:28:20.62:928,21,0	1/1:3,11:15:33.11:808,33,0	1/1:5,0:7:8.66:103,9,0	0/1:25,0:24:60.63:61,0,366	0/1:66,0:66:99:787,0,1213	0/1:32,0:34:14.42:14,0,723	1/1:14,6:20:21.07:494,21,0	1/1:7,16:24:27.09:642,27,0	1/1:1,9:10:21.07:494,21,0	1/1:43,0:43:75.22:1584,75,0	0/1:46,0:46:99:313,0,834	0/1:49,0:48:99:207,0,1116	0/1:28,0:28:99:511,0,484
chr10	41937560	.	T	TA	1342.46	PASS	AB=0.886;AC=21;AF=0.375;AN=56;BaseQRankSum=16.966;DP=759;FS=8.036;HRun=0;HaplotypeScore=201.6413;InbreedingCoeff=-0.1738;MQ=61.31;MQ0=1;MQRankSum=-3.174;QD=2.62;ReadPosRankSum=11.051;VQSLOD=0.5643;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:8,3:11:21.89:22,0,22	0/0:13,0:13:39.13:0,39,545	0/0:12,0:8:14.70:0,15,170	0/0:14,0:11:21.04:0,21,253	0/0:30,0:30:87.21:0,87,1176	0/1:13,0:13:1.98:2,0,78	0/1:15,0:15:1.06:1,0,144	0/0:56,1:54:72.49:0,72,1595	0/1:19,0:19:20.52:21,0,137	0/1:24,19:43:64.56:297,0,65	0/1:16,19:35:29.41:174,0,29	0/1:30,0:29:4.72:5,0,196	0/1:38,0:39:27.32:27,0,275	0/1:36,0:36:1.78:2,0,237	1/1:20,29:48:24.45:354,24,0	0/1:15,16:31:14.94:149,0,15	0/1:16,0:16:2.74:3,0,142	0/1:5,1:6:1.18:1,0,46	0/0:17,1:17:11.78:0,12,529	0/1:36,14:50:12.03:12,0,1275	0/0:35,0:35:72.16:0,72,935	0/1:10,0:10:10.35:10,0,88	0/0:22,0:22:4.36:0,4,188	0/1:13,0:13:10.02:10,0,129	1/1:11,26:37:43.47:343,43,0	0/1:29,4:33:5.67:6,0,914	0/0:42,4:45:78.67:0,79,1420	0/1:18,8:26:62.09:62,0,596
chr10	41937561	.	T	TG	52.85	PASS	AB=0.666;AC=6;AF=0.107;AN=56;BaseQRankSum=15.348;DP=758;FS=2.989;HRun=0;HaplotypeScore=210.3463;InbreedingCoeff=-0.1053;MQ=60.61;MQ0=1;MQRankSum=-12.222;QD=0.26;ReadPosRankSum=5.965;VQSLOD=2.5559;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:8,3:11:14.76:15,0,22	0/0:13,0:13:39.13:0,39,545	0/0:12,0:8:15.05:0,15,190	0/0:13,0:10:21.02:0,21,250	0/0:30,0:30:90.28:0,90,1226	0/0:13,0:13:33.03:0,33,332	0/0:16,0:16:44.99:0,45,448	0/0:56,1:54:99:0,130,1697	0/0:19,0:19:53.68:0,54,514	0/1:24,19:43:35.90:36,0,220	0/1:15,19:34:13.15:13,0,124	0/0:31,0:30:84.07:0,84,830	0/0:38,0:38:99:0,105,1009	0/0:36,0:36:97.52:0,98,911	0/1:22,29:50:40.15:40,0,93	0/1:15,16:31:4.71:5,0,85	0/0:16,0:16:44.92:0,45,433	0/0:5,1:6:11.60:0,12,98	0/0:17,1:17:41.88:0,42,579	0/0:36,14:50:79.65:0,80,1377	0/0:36,0:36:63.26:0,63,885	0/0:10,0:10:26.70:0,27,240	0/0:22,0:22:41.63:0,42,429	0/0:13,0:13:32.77:0,33,322	0/1:10,26:36:16.67:63,0,17	0/0:29,4:33:63.53:0,64,1010	0/0:40,4:43:95.85:0,96,1340	0/0:18,8:26:20.78:0,21,588
chr10	41937563	.	A	ATG	4335.94	PASS	AB=0.842;AC=17;AF=0.304;AN=56;BaseQRankSum=13.525;DP=758;FS=0.000;HRun=0;HaplotypeScore=207.5939;InbreedingCoeff=0.5900;MQ=61.29;MQ0=0;MQRankSum=-9.679;QD=11.85;ReadPosRankSum=0.234;VQSLOD=4.5667;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,3:12:13.22:141,13,0	0/0:13,0:13:39.11:0,39,573	0/0:12,0:8:11.82:0,12,144	0/0:13,0:10:20.96:0,21,285	0/0:28,0:28:81.28:0,81,1237	0/0:14,0:14:33.11:0,33,497	0/0:16,0:16:48.14:0,48,666	0/0:55,1:53:89.25:0,89,1613	0/0:20,0:20:50.84:0,51,753	1/1:23,20:43:43.60:868,44,0	1/1:15,19:34:69.12:635,69,0	0/0:31,0:30:87.28:0,87,1277	0/0:39,0:39:99:0,102,1485	0/0:36,0:36:94.91:0,95,1388	1/1:21,29:49:85.73:906,86,0	1/1:15,16:31:43.65:458,44,0	0/0:16,0:16:45.14:0,45,629	0/1:5,1:6:8.31:30,0,8	0/0:16,1:17:9.29:0,9,580	0/1:36,14:50:99:170,0,1346	0/0:34,0:34:60.41:0,60,979	0/0:10,0:10:23.82:0,24,345	0/0:23,0:23:41.80:0,42,614	0/0:14,0:14:29.66:0,30,452	1/1:11,26:37:80.54:844,81,0	0/1:28,4:32:58.81:59,0,982	0/1:41,4:44:5.01:5,0,1217	0/1:18,8:26:99:220,0,549
chr10	41937727	.	TA	T	8893.06	PASS	AB=0.625;AC=49;AF=0.875;AN=56;BaseQRankSum=0.539;DP=640;FS=0.664;HRun=11;HaplotypeScore=112.3805;InbreedingCoeff=0.8723;MQ=70.20;MQ0=1;MQRankSum=-3.969;QD=15.12;ReadPosRankSum=3.176;VQSLOD=4.8568;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,0:20:34.62:100,35,0	0/0:13,0:13:36.08:0,36,378	0/0:23,0:21:16.03:0,16,241	0/0:14,0:14:26.75:0,27,248	1/1:3,23:26:50.87:412,51,0	1/1:5,13:18:6.96:263,7,0	1/1:1,11:12:26.95:222,27,0	1/1:6,33:39:89.78:729,90,0	1/1:3,21:24:56.89:465,57,0	1/1:3,0:34:59.70:174,60,0	1/1:3,0:25:39.35:113,39,0	1/1:3,16:19:44.94:369,45,0	1/1:2,32:34:92.89:763,93,0	1/1:1,28:29:74.89:615,75,0	1/1:4,0:34:43.92:143,44,0	1/1:4,0:23:32.58:94,33,0	1/1:2,10:12:23.96:197,24,0	1/1:2,0:13:18.33:53,18,0	1/1:4,17:21:52.74:424,53,0	1/1:6,18:24:44.85:362,45,0	0/1:2,3:5:0.62:41,0,1	1/1:3,28:32:85.89:688,86,0	1/1:1,24:26:70.95:572,71,0	1/1:0,13:14:32:251,32,0	1/1:0,0:17:32.78:95,33,0	1/1:3,25:31:77.46:589,77,0	1/1:2,32:34:95.88:788,96,0	1/1:3,17:20:44.93:369,45,0
chr10	41938102	.	GGAGACTCCGCACACATGTGTGCAT	G	27114.77	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=14.136;DP=421;FS=25.511;HRun=0;HaplotypeScore=262.2976;InbreedingCoeff=0.9424;MQ=79.10;MQ0=1;MQRankSum=-14.513;QD=115.38;ReadPosRankSum=5.479;VQSLOD=2.8540;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,26:26:51.13:2947,51,0	0/0:4,0:4:12.04:0,12,1118	0/0:14,0:14:39.09:0,39,1051	0/0:16,0:16:45.15:0,45,1761	1/1:0,14:14:27.06:1495,27,0	1/1:0,18:18:36.12:2316,36,0	1/1:0,8:8:9.03:538,9,0	0/0:27,0:27:81.28:0,81,6931	1/1:0,17:17:39.13:2615,39,0	1/1:0,13:13:35.88:1546,36,0	1/1:0,16:16:30.10:1925,30,0	1/1:0,9:9:21.07:1379,21,0	1/1:0,13:13:33.11:2131,33,0	1/1:0,12:12:24.08:1566,24,0	1/1:0,14:14:24.08:1619,24,0	1/1:0,14:14:30.57:1989,31,0	1/1:1,12:12:21.07:1358,21,0	1/1:0,5:5:9.03:607,9,0	0/0:23,0:23:69.24:0,69,5941	0/0:14,0:14:42.12:0,42,3903	0/0:32,0:32:96.33:0,96,9551	1/1:0,7:7:12.04:726,12,0	1/1:0,11:11:17.97:1153,18,0	1/1:0,15:15:14.60:1003,15,0	1/1:0,10:10:3.01:202,3,0	0/0:16,0:16:48.16:0,48,5129	0/0:27,0:26:81.26:0,81,7403	0/0:13,0:13:39.13:0,39,4330
chr10	41938856	.	G	GA	19726.61	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-2.289;DP=635;FS=12.452;HRun=2;HaplotypeScore=142.2657;InbreedingCoeff=0.9874;MQ=64.37;MQ0=0;MQRankSum=-5.641;QD=36.40;ReadPosRankSum=4.530;VQSLOD=2.7805;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,36:37:93.26:1314,93,0	0/0:7,0:7:21.03:0,21,233	0/0:25,0:25:61.41:0,61,721	0/0:26,0:24:60.14:0,60,720	1/1:0,19:19:45.15:640,45,0	1/1:1,11:12:27.09:388,27,0	1/1:1,27:28:66.22:949,66,0	1/1:9,23:31:84.20:1139,84,0	1/1:1,27:28:81.27:1163,81,0	1/1:0,16:16:45.15:645,45,0	1/1:1,6:7:12:150,12,0	1/1:1,22:23:63.21:907,63,0	1/1:1,26:27:75.25:1080,75,0	1/1:0,27:27:69.23:994,69,0	1/1:0,27:27:75.25:1079,75,0	1/1:1,23:24:63.21:906,63,0	0/0:35,0:35:90.12:0,90,1047	1/1:4,27:31:66.22:950,66,0	1/1:1,17:18:51.13:694,51,0	1/1:1,11:12:21.03:278,21,0	1/1:4,25:29:72.20:1007,72,0	1/1:0,20:20:60.20:864,60,0	1/1:0,16:16:35.68:495,36,0	1/1:0,32:32:69.23:994,69,0	1/1:0,11:11:27.09:389,27,0	1/1:3,19:22:63.21:903,63,0	1/1:0,35:35:99:1504,105,0	1/1:4,5:9:21.07:298,21,0
chr10	41938889	.	GTCT	G	5778.13	PASS	AB=0.512;AC=13;AF=0.232;AN=56;BaseQRankSum=-2.006;DP=612;FS=3.332;HRun=0;HaplotypeScore=172.0286;InbreedingCoeff=0.9303;MQ=62.31;MQ0=0;MQRankSum=-10.346;QD=39.85;ReadPosRankSum=-2.286;VQSLOD=5.3515;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,99,2074	0/0:9,0:9:27.09:0,27,593	0/0:18,0:18:42.95:0,43,784	0/0:21,0:20:51.17:0,51,1052	0/0:22,0:22:57.20:0,57,1279	0/0:11,0:11:30.10:0,30,690	0/0:31,0:31:84.27:0,84,1864	1/1:8,32:39:99:1901,117,0	0/0:27,0:27:78.27:0,78,1754	0/0:15,0:15:42.14:0,42,969	0/0:17,0:17:48.10:0,48,1106	0/0:25,0:25:72.25:0,72,1520	0/0:24,0:24:69.22:0,69,1535	0/0:23,0:23:63.20:0,63,1377	0/0:20,0:20:57.19:0,57,1237	0/0:27,0:27:66.17:0,66,1377	0/0:37,0:37:69.42:0,69,435	0/0:26,0:26:75.26:0,75,1688	1/1:5,8:13:33.09:518,33,0	1/1:1,11:12:23.99:378,24,0	1/1:7,15:22:26.93:347,27,0	0/0:21,0:21:63.20:0,63,1402	0/0:19,0:19:50.77:0,51,1171	0/0:21,0:21:60.21:0,60,1353	0/0:16,0:16:42.14:0,42,963	0/1:1,21:22:3.01:982,0,3	1/1:2,27:29:87.20:1396,87,0	1/1:1,6:7:15.05:256,15,0
chr10	41938890	.	T	TC	1152.38	PASS	AB=0.935;AC=8;AF=0.143;AN=56;BaseQRankSum=2.678;DP=613;FS=1.135;HRun=1;HaplotypeScore=165.4131;InbreedingCoeff=0.5468;MQ=62.34;MQ0=0;MQRankSum=-4.255;QD=8.17;ReadPosRankSum=-2.244;VQSLOD=0.1794;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,102,1271	0/0:9,0:9:24.08:0,24,311	0/0:18,0:18:33.06:0,33,378	0/0:20,0:19:51.16:0,51,638	0/0:21,0:21:57.18:0,57,738	0/0:12,0:12:30.10:0,30,389	0/0:31,0:31:84.24:0,84,1060	0/1:34,6:39:12.09:310,0,12	0/0:28,0:28:78.25:0,78,1011	0/0:15,0:15:45.14:0,45,572	0/0:17,0:17:48.16:0,48,623	0/0:26,0:26:69.22:0,69,895	0/0:24,0:24:69.21:0,69,882	0/0:24,0:24:63.19:0,63,802	0/0:20,0:20:57.19:0,57,739	0/0:24,0:24:66.16:0,66,833	1/1:37,0:37:98.38:753,98,0	0/0:27,0:27:75.24:0,75,973	1/1:11,1:12:1.59:101,2,0	0/0:12,0:12:5.92:0,6,16	1/1:20,2:22:3.94:79,4,0	0/0:21,0:21:63.19:0,63,802	0/0:19,0:19:51.17:0,51,661	0/0:21,0:21:60.19:0,60,779	0/0:16,0:16:42.14:0,42,545	0/0:22,0:22:19.10:0,19,80	0/1:30,0:30:22.38:44,0,22	0/0:6,0:7:4.43:0,4,11
chr10	41938891	.	C	CG	1398.05	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=0.550;DP=616;FS=4.615;HRun=0;HaplotypeScore=162.3913;InbreedingCoeff=0.3405;MQ=62.53;MQ0=0;MQRankSum=-4.276;QD=12.60;ReadPosRankSum=-0.499;VQSLOD=4.3714;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,102,1351	0/0:9,0:9:27.05:0,27,356	0/0:18,0:19:42.19:0,42,488	0/0:21,0:20:54.17:0,54,711	0/0:22,0:22:57.19:0,57,796	0/0:12,0:12:33.09:0,33,442	0/0:30,0:30:84.26:0,84,1156	0/1:39,0:39:73.78:74,0,109	0/0:28,0:28:78.26:0,78,1089	0/0:14,0:14:42.14:0,42,588	0/0:17,0:17:48.16:0,48,671	0/0:26,0:26:72.22:0,72,985	0/0:24,0:24:69.22:0,69,948	0/0:25,0:25:66.18:0,66,885	0/0:20,0:20:57.19:0,57,795	0/0:25,0:25:66.17:0,66,893	1/1:0,36:37:99:1410,99,0	0/0:27,0:27:75.25:0,75,1048	0/1:12,0:12:14.50:14,0,31	0/0:12,0:12:15.21:0,15,48	0/1:22,0:22:17.89:22,0,18	0/0:21,0:21:63.20:0,63,864	0/0:19,0:19:51.17:0,51,711	0/0:22,0:22:60.20:0,60,838	0/0:16,0:16:42.14:0,42,587	0/0:22,0:22:47.03:0,47,179	0/0:30,0:30:57.18:0,57,176	0/0:7,0:7:11.10:0,11,35
chr10	41939199	.	T	TC	3775.31	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=13.831;DP=525;FS=5.413;HRun=0;HaplotypeScore=112.3950;InbreedingCoeff=0.9828;MQ=86.56;MQ0=0;MQRankSum=-8.476;QD=21.21;ReadPosRankSum=-1.662;VQSLOD=4.4589;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:96.28:0,96,1319	0/0:10,0:10:30.10:0,30,419	0/0:30,0:30:81.15:0,81,1030	0/0:25,0:25:65.49:0,65,926	1/1:11,5:16:41.65:416,42,0	0/0:16,0:16:48.16:0,48,670	0/0:23,0:23:69.22:0,69,948	1/1:2,20:21:59.32:424,59,0	0/0:32,0:32:93.27:0,93,1274	1/1:3,6:9:17.91:179,18,0	1/1:2,1:3:8.59:46,9,0	0/0:20,0:20:60.20:0,60,839	0/0:21,0:21:63.18:0,63,861	0/0:32,0:32:96.32:0,96,1341	1/1:19,9:28:82.30:763,82,0	0/0:20,0:20:60.19:0,60,824	0/0:28,0:28:81.13:0,81,1078	1/1:19,7:26:65.76:651,66,0	1/1:0,5:5:13.15:90,13,0	1/1:1,6:7:17.27:102,17,0	1/1:2,13:15:36.81:230,37,0	0/0:23,0:23:63.17:0,63,855	0/0:10,0:10:24.04:0,24,313	0/0:24,0:24:72.24:0,72,1006	1/1:10,3:13:31.58:218,32,0	1/1:2,11:13:31.87:225,32,0	1/1:2,13:15:43.33:295,43,0	1/1:5,0:5:14.95:135,15,0
chr10	41939202	.	TC	T	2584.55	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=14.905;DP=516;FS=11.963;HRun=1;HaplotypeScore=111.9284;InbreedingCoeff=0.9609;MQ=86.90;MQ0=0;MQRankSum=-10.898;QD=15.11;ReadPosRankSum=-1.815;VQSLOD=2.0735;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:93.32:0,93,1486	0/0:10,0:10:30.10:0,30,479	0/0:31,0:31:86.47:0,86,1332	0/0:27,0:26:60.20:0,60,989	1/1:9,6:15:39.74:301,40,0	0/0:15,0:15:45.10:0,45,686	0/0:23,0:23:69.24:0,69,1095	1/1:1,21:21:56.77:325,57,0	0/0:33,0:33:96.31:0,96,1502	1/1:3,5:8:14.61:114,15,0	1/1:2,1:3:6.96:23,7,0	0/0:20,0:20:60.20:0,60,959	0/0:21,0:21:63.21:0,63,1004	0/0:31,0:31:93.32:0,93,1484	1/1:17,10:27:74.02:601,74,0	0/0:20,0:20:60.20:0,60,959	0/0:28,0:28:84.27:0,84,1318	1/1:18,7:25:69.37:549,69,0	1/1:0,5:5:4.71:54,5,0	1/1:0,6:6:12.74:71,13,0	1/1:3,12:15:32.32:161,32,0	0/0:22,0:22:60.14:0,60,923	0/0:10,0:10:27.09:0,27,429	0/0:23,0:23:69.22:0,69,1079	1/1:9,3:12:25.61:148,26,0	1/1:2,11:13:28.56:160,29,0	1/1:2,13:15:31.05:169,31,0	1/1:5,0:5:14.97:135,15,0
chr10	41939679	.	C	CT	1353.16	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=8.771;DP=431;FS=31.466;HRun=0;HaplotypeScore=129.3147;InbreedingCoeff=0.9160;MQ=86.99;MQ0=1;MQRankSum=-9.317;QD=10.25;ReadPosRankSum=-1.057;VQSLOD=1.9946;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:84.17:0,84,951	0/0:10,0:10:27.01:0,27,334	0/0:34,0:32:64.34:0,64,791	0/0:32,0:30:60.75:0,61,601	0/0:16,0:16:48.08:0,48,564	1/1:10,0:10:21.11:109,21,0	1/1:10,0:10:16.87:82,17,0	0/0:27,0:27:47.99:0,48,575	1/1:7,1:8:13.20:88,13,0	1/1:10,1:11:23.30:118,23,0	1/1:13,2:15:35.70:298,36,0	1/1:8,0:8:0.43:10,0,0	1/1:6,1:7:15.84:92,16,0	1/1:7,1:8:12.85:67,13,0	1/1:4,0:4:6.11:19,6,0	0/0:19,0:19:57.17:0,57,707	0/0:23,0:23:63.17:0,63,848	1/1:2,0:2:5.74:31,6,0	0/0:14,0:14:36.03:0,36,450	0/0:16,0:16:42.14:0,42,573	0/0:29,0:29:60.19:0,60,797	1/1:11,1:12:30.66:193,31,0	1/1:10,2:12:17.23:158,17,0	1/1:6,0:6:7.91:55,8,0	1/1:18,1:19:35.30:254,35,0	0/0:18,0:18:45.05:0,45,571	0/0:14,0:14:36.01:0,36,438	0/0:11,0:11:33.11:0,33,461
chr10	41939683	.	CT	C	1477.14	PASS	AB=1.000;AC=18;AF=0.321;AN=56;BaseQRankSum=-5.945;DP=436;FS=19.274;HRun=7;HaplotypeScore=128.8577;InbreedingCoeff=0.2513;MQ=87.08;MQ0=1;MQRankSum=3.995;QD=8.90;ReadPosRankSum=0.528;VQSLOD=0.5489;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,24:29:51.11:519,51,0	0/0:9,0:9:24.04:0,24,272	0/0:33,0:31:61.80:0,62,638	0/0:32,0:32:39.63:0,40,416	1/1:2,16:18:47.93:449,48,0	0/1:10,0:10:7.21:7,0,17	0/1:14,0:14:14.61:15,0,34	0/0:26,0:26:41.98:0,42,455	0/1:9,0:9:9.42:23,0,9	0/1:12,0:12:10.22:25,0,10	0/1:15,0:15:16.82:50,0,17	0/1:9,0:9:9.97:10,0,19	0/1:8,0:8:8.78:9,0,19	0/1:8,0:8:4.70:5,0,17	0/1:6,0:6:8.50:9,0,9	1/1:2,16:18:48.11:489,48,0	0/0:26,2:28:8.02:0,8,678	1/1:3,0:3:5.41:26,5,0	0/0:15,0:15:25.47:0,25,405	0/0:14,0:14:39.04:0,39,425	0/0:30,0:30:57.03:0,57,656	0/0:12,0:12:10.04:0,10,35	0/0:12,0:12:18.91:0,19,81	0/1:7,0:7:1.26:17,0,1	0/0:19,0:19:2.84:0,3,51	0/0:16,0:16:36.11:0,36,443	0/0:11,0:11:27.01:0,27,322	0/0:11,0:11:33.11:0,33,413
chr10	41939861	.	CT	C	2541.15	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=13.748;DP=335;FS=30.462;HRun=1;HaplotypeScore=210.9306;InbreedingCoeff=0.8437;MQ=86.96;MQ0=0;MQRankSum=-13.205;QD=12.10;ReadPosRankSum=5.080;VQSLOD=0.2213;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:90.28:0,90,1411	0/0:9,0:9:27.09:0,27,431	0/0:17,0:17:51.15:0,51,743	0/0:26,0:26:74.49:0,74,1013	0/0:26,0:26:75.24:0,75,1172	1/1:0,5:5:5.97:44,6,0	1/1:5,12:17:32.70:232,33,0	1/1:7,4:11:18.35:131,18,0	1/1:2,11:13:32.81:240,33,0	1/1:0,5:5:14.86:108,15,0	1/1:0,7:7:8.70:63,9,0	1/1:4,10:14:35.68:261,36,0	1/1:3,5:8:20.65:141,21,0	1/1:4,14:18:37.12:258,37,0	1/1:3,5:8:18.35:130,18,0	0/0:17,0:17:51.17:0,51,815	1/1:2,5:7:14.08:109,14,0	1/1:2,3:5:6.92:49,7,0	1/1:5,5:10:23.44:170,23,0	1/1:4,6:10:14.85:103,15,0	1/1:3,18:21:9.78:88,10,0	1/1:0,8:8:8.94:65,9,0	1/1:0,2:2:2.98:21,3,0	1/1:3,7:10:6.75:45,7,0	1/1:1,9:10:16.09:106,16,0	1/1:2,4:6:14.87:108,15,0	1/1:3,10:13:30.18:213,30,0	1/1:0,2:2:5.97:45,6,0
chr10	41939864	.	CT	C	2304.01	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=13.580;DP=297;FS=26.955;HRun=1;HaplotypeScore=185.6607;InbreedingCoeff=0.8306;MQ=89.68;MQ0=0;MQRankSum=-13.245;QD=13.63;ReadPosRankSum=5.899;VQSLOD=1.1318;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,105,1603	0/0:9,0:9:27.08:0,27,408	0/0:14,0:14:42.06:0,42,638	0/0:27,0:27:80.84:0,81,1102	0/0:26,0:26:72.25:0,72,1151	1/1:0,5:5:5.97:44,6,0	1/1:0,12:15:32.09:208,32,0	1/1:0,4:4:11.79:82,12,0	1/1:0,11:12:32.72:230,33,0	1/1:0,5:5:14.73:102,15,0	1/1:0,7:7:11.66:82,12,0	1/1:0,10:12:35.64:247,36,0	1/1:0,5:7:20.13:124,20,0	1/1:0,14:15:35.66:248,36,0	1/1:0,5:6:17.77:121,18,0	0/0:17,0:17:51.16:0,51,789	1/1:0,5:5:14.89:107,15,0	1/1:0,3:3:5.97:45,6,0	1/1:0,5:7:20.92:163,21,0	1/1:0,6:6:11.91:84,12,0	1/1:0,18:18:9.77:86,10,0	1/1:0,8:8:8.97:72,9,0	1/1:0,2:2:2.98:21,3,0	1/1:0,7:7:5.83:42,6,0	1/1:0,9:9:12.64:81,13,0	1/1:0,4:4:11.94:90,12,0	1/1:0,10:10:23.77:169,24,0	1/1:0,2:2:5.97:45,6,0
chr10	41939911	.	G	GGT	15142.95	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=11.690;DP=500;FS=19.733;HRun=0;HaplotypeScore=179.7296;InbreedingCoeff=0.9709;MQ=70.76;MQ0=0;MQRankSum=-13.288;QD=39.13;ReadPosRankSum=-0.568;VQSLOD=3.5201;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,108,1625	0/0:8,0:8:24.08:0,24,367	0/0:16,0:16:39.09:0,39,551	0/0:21,0:21:46.66:0,47,600	0/0:16,0:16:45.13:0,45,647	1/1:0,8:8:21.07:404,21,0	1/1:7,18:26:54.18:1010,54,0	1/1:5,14:19:54.12:930,54,0	1/1:2,21:23:60.21:1147,60,0	1/1:2,9:11:33.07:597,33,0	1/1:1,14:15:20.97:403,21,0	1/1:1,26:27:63.22:1212,63,0	1/1:1,16:17:45.15:842,45,0	1/1:1,24:27:66.70:1243,67,0	1/1:3,18:21:48.04:880,48,0	0/0:15,0:15:45.15:0,45,689	1/1:1,8:10:24.01:418,24,0	1/1:1,8:10:21.07:404,21,0	1/1:5,13:16:42.14:789,42,0	1/1:1,13:14:24.08:439,24,0	1/1:3,37:40:45.62:799,46,0	1/1:4,14:19:15.05:288,15,0	1/1:0,7:7:9.50:170,10,0	1/1:1,22:23:41.88:759,42,0	1/1:3,12:17:36.12:681,36,0	1/1:6,12:18:51.17:920,51,0	1/1:0,13:14:33.11:635,33,0	1/1:0,3:3:9.03:173,9,0
chr10	41940741	.	TA	T	13494	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=15.580;DP=580;FS=0.774;HRun=1;HaplotypeScore=150.2452;InbreedingCoeff=0.9980;MQ=59.19;MQ0=1;MQRankSum=-1.340;QD=30.32;ReadPosRankSum=3.996;VQSLOD=4.6480;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:69.24:0,69,1102	0/0:9,0:9:27.09:0,27,432	0/0:31,0:26:61.21:0,61,1101	0/0:20,0:18:51.17:0,51,791	0/0:28,0:28:84.29:0,84,1341	1/1:3,18:21:56.82:672,57,0	1/1:0,14:14:42.13:504,42,0	1/1:6,25:18:39.72:458,40,0	1/1:2,19:21:48.62:577,49,0	1/1:3,22:23:63.19:754,63,0	1/1:1,25:26:66.20:790,66,0	1/1:2,19:21:56.33:683,56,0	1/1:0,26:26:72.22:863,72,0	1/1:0,15:15:36.11:431,36,0	1/1:2,16:18:51.61:600,52,0	0/0:23,0:23:69.21:0,69,1058	1/1:1,28:28:46.32:801,46,0	1/1:0,23:23:57.13:667,57,0	1/1:2,13:13:36.11:432,36,0	1/1:2,19:20:54.10:626,54,0	1/1:1,15:16:42.60:505,43,0	1/1:1,14:15:35.69:431,36,0	1/1:0,19:19:54.16:644,54,0	1/1:0,13:13:39.12:468,39,0	1/1:2,21:23:63.66:756,64,0	1/1:0,17:17:51.16:611,51,0	1/1:1,29:30:84.26:1006,84,0	1/1:0,6:6:18.06:216,18,0
chr10	41941137	.	AATGTGTTCGAGATT	A	33304.06	PASS	AB=0.660;AC=41;AF=0.732;AN=56;BaseQRankSum=14.926;DP=518;FS=3.291;HRun=0;HaplotypeScore=243.5939;InbreedingCoeff=0.7125;MQ=47.54;MQ0=0;MQRankSum=-13.034;QD=89.05;ReadPosRankSum=5.838;VQSLOD=4.1523;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:72.23:0,72,4352	0/0:10,0:10:30.10:0,30,2010	0/0:31,0:29:84.29:0,84,4659	0/0:25,0:23:66.22:0,66,3335	0/0:36,0:36:96.32:0,96,5850	1/1:0,24:24:63.22:2650,63,0	1/1:4,13:17:36.12:1533,36,0	1/1:9,19:27:57.15:1733,57,0	1/1:1,11:12:24.08:1022,24,0	1/1:0,14:14:39.12:1402,39,0	1/1:5,10:15:30.10:1279,30,0	1/1:1,14:15:36.12:1527,36,0	1/1:3,16:19:48.16:2046,48,0	1/1:1,14:15:36.12:1532,36,0	1/1:2,17:19:42.14:1791,42,0	0/0:17,0:17:51.16:0,51,3235	0/1:4,5:9:86.20:653,0,86	0/1:6,3:9:60.33:372,0,60	1/1:3,9:11:27.08:1049,27,0	1/1:2,31:33:84.23:3136,84,0	1/1:6,6:12:9.03:384,9,0	1/1:1,7:8:14.97:424,15,0	1/1:4,16:20:42.14:1788,42,0	1/1:2,6:8:15.05:640,15,0	1/1:2,19:20:51.18:2167,51,0	1/1:2,20:22:60.16:2249,60,0	1/1:4,28:32:74.94:3196,75,0	0/1:3,7:10:99:733,0,135
chr10	41941478	.	TGAGCACGTG	T	3215.28	PASS	AB=0.535;AC=5;AF=0.089;AN=56;BaseQRankSum=6.411;DP=623;FS=0.622;HRun=0;HaplotypeScore=221.4566;InbreedingCoeff=0.7789;MQ=74.62;MQ0=1;MQRankSum=-9.639;QD=42.87;ReadPosRankSum=2.201;VQSLOD=3.3974;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,20:28:36.08:1030,36,0	0/0:11,0:11:33.11:0,33,1405	0/0:34,0:31:78.04:0,78,2553	0/0:27,0:25:69.16:0,69,2426	1/1:1,23:24:30.10:919,30,0	0/0:21,0:21:60.21:0,60,2342	0/0:23,0:23:69.24:0,69,2614	0/0:30,0:30:81.27:0,81,2884	0/0:23,0:23:60.21:0,60,2188	0/0:17,0:17:51.18:0,51,2003	0/0:14,0:14:36.12:0,36,1306	0/0:13,0:13:39.13:0,39,1515	0/0:32,0:32:90.31:0,90,3381	0/0:20,0:20:57.20:0,57,2213	0/0:33,0:33:93.32:0,93,3657	0/1:3,20:23:68.98:1396,0,69	0/0:16,0:16:48.16:0,48,1878	0/0:13,0:12:30.10:0,30,1107	0/0:16,0:16:42.14:0,42,1541	0/0:26,0:26:75.25:0,75,2859	0/0:34,0:34:96.33:0,96,3565	0/0:11,0:11:33.10:0,33,1137	0/0:20,0:20:60.19:0,60,2238	0/0:40,0:39:99:0,105,4160	0/0:16,0:16:45.15:0,45,1769	0/0:27,0:27:78.27:0,78,2920	0/0:23,0:23:66.23:0,66,2519	0/0:8,0:8:24.07:0,24,889
chr10	41941944	.	AT	A	10465.66	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=10.795;DP=528;FS=6.756;HRun=8;HaplotypeScore=50.2576;InbreedingCoeff=0.9788;MQ=61.02;MQ0=1;MQRankSum=-1.782;QD=24.00;ReadPosRankSum=0.333;VQSLOD=5.3437;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:66.19:0,66,785	0/0:9,0:9:18.06:0,18,217	0/0:7,0:7:12.03:0,12,136	0/0:6,0:5:9.03:0,9,109	0/0:27,0:27:78.23:0,78,931	1/1:4,18:22:54.08:522,54,0	1/1:5,17:22:45.06:435,45,0	1/1:8,20:28:57.04:539,57,0	1/1:3,10:13:27.04:261,27,0	1/1:2,23:25:69.11:666,69,0	1/1:2,21:23:57.09:551,57,0	1/1:2,17:19:48.08:464,48,0	1/1:1,25:26:72.11:695,72,0	1/1:4,15:19:39.06:377,39,0	1/1:2,7:9:21.03:203,21,0	0/0:18,0:18:51.16:0,51,616	1/1:0,19:19:51.08:492,51,0	1/1:0,10:10:30.05:290,30,0	1/1:3,19:22:57.07:546,57,0	1/1:0,32:32:93.15:898,93,0	1/1:1,13:14:36.05:348,36,0	1/1:3,15:18:42.06:406,42,0	1/1:0,16:16:48.08:463,48,0	1/1:0,13:13:36.06:348,36,0	1/1:4,14:18:33.04:319,33,0	1/1:3,25:28:75.10:717,75,0	1/1:2,19:21:57.09:550,57,0	1/1:3,16:19:39.06:377,39,0
chr10	41942175	.	A	AT	13921.82	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-10.161;DP=510;FS=1.060;HRun=3;HaplotypeScore=41.1185;InbreedingCoeff=0.9540;MQ=58.28;MQ0=25;MQRankSum=-0.005;QD=34.21;ReadPosRankSum=0.045;VQSLOD=4.7131;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:21:56.38:0,56,650	0/0:14,0:14:42.13:0,42,504	0/0:22,0:4:6.02:0,6,72	0/0:13,0:3:6.01:0,6,63	0/0:15,0:15:39.12:0,39,467	1/1:0,19:19:45.15:630,45,0	1/1:0,21:21:51.17:708,51,0	1/1:5,29:29:78.25:1076,78,0	1/1:3,19:22:51.17:708,51,0	1/1:2,17:19:45.13:610,45,0	1/1:0,14:14:36.12:504,36,0	1/1:1,18:19:51.17:714,51,0	1/1:0,25:25:69.23:966,69,0	1/1:1,11:13:27.08:361,27,0	1/1:1,24:24:72.24:1008,72,0	0/0:18,0:18:54.17:0,54,648	1/1:3,10:13:30.10:420,30,0	1/1:1,7:8:18.06:252,18,0	1/1:5,14:15:36.11:487,36,0	1/1:1,19:20:54.14:727,54,0	1/1:0,12:12:27.09:378,27,0	1/1:1,20:21:51.17:714,51,0	1/1:1,18:19:51.17:714,51,0	1/1:1,16:16:36.12:504,36,0	1/1:0,13:13:27.09:378,27,0	1/1:0,13:13:39.09:508,39,0	1/1:0,27:27:72.24:1008,72,0	1/1:1,13:14:39.13:546,39,0
chr10	41942878	.	A	AC	5043.43	PASS	AB=0.991;AC=46;AF=0.821;AN=56;BaseQRankSum=-4.498;DP=480;FS=3.373;HRun=2;HaplotypeScore=69.9937;InbreedingCoeff=0.3728;MQ=66.09;MQ0=6;MQRankSum=0.505;QD=11.26;ReadPosRankSum=0.356;VQSLOD=3.0790;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:11,0:11:17.70:38,0,18	0/0:10,0:10:24.07:0,24,295	0/0:14,0:10:17.49:0,17,130	0/0:6,0:5:6.01:0,6,62	0/1:27,1:28:14.13:133,0,14	1/1:25,0:25:15.86:106,16,0	1/1:9,0:9:9.35:57,9,0	1/1:29,0:25:24.95:154,25,0	1/1:12,0:12:9.94:60,10,0	1/1:0,34:34:99:1195,101,0	1/1:2,24:26:54.07:657,54,0	1/1:16,0:16:20.58:127,21,0	1/1:13,0:13:10.20:100,10,0	1/1:12,0:12:6.31:55,6,0	1/1:0,14:14:39.13:513,39,0	1/1:17,0:17:17.84:121,18,0	1/1:21,0:21:2.52:58,3,0	1/1:1,12:13:30.10:389,30,0	0/1:14,0:13:4.32:84,0,4	1/1:24,1:25:1.38:142,1,0	1/1:5,0:5:6.49:46,6,0	0/1:12,0:12:8.58:9,0,10	1/1:22,1:23:21.57:168,22,0	1/1:10,0:10:8.62:68,9,0	1/1:0,15:15:39.13:513,39,0	1/1:28,0:28:20.94:87,21,0	1/1:24,0:24:2.63:55,3,0	1/1:11,1:12:12.24:112,12,0
chr10	41943222	.	GA	G	10473.20	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=8.474;DP=555;FS=4.320;HRun=9;HaplotypeScore=72.8535;InbreedingCoeff=0.9848;MQ=61.52;MQ0=2;MQRankSum=0.731;QD=22.47;ReadPosRankSum=2.259;VQSLOD=5.9174;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,13:16:33.01:302,33,0	0/0:13,0:13:36.07:0,36,394	0/0:19,0:18:38.78:0,39,423	0/0:10,0:8:12.04:0,12,139	0/0:46,0:47:99:0,135,1522	1/1:1,21:22:63.03:577,63,0	1/1:1,10:11:24.01:220,24,0	1/1:3,30:32:87.04:795,87,0	1/1:2,18:20:51.03:467,51,0	1/1:5,29:34:90.04:822,90,0	1/1:5,15:20:42.01:384,42,0	1/1:0,11:11:30.02:275,30,0	1/1:4,19:23:54.02:494,54,0	1/1:1,13:14:27.01:247,27,0	1/1:3,9:12:21.01:192,21,0	1/1:0,15:15:42.02:384,42,0	1/1:3,16:19:42.01:384,42,0	1/1:2,11:13:33.02:302,33,0	1/1:3,8:11:24.01:220,24,0	1/1:5,17:22:16.40:404,16,0	1/1:1,9:10:27.01:247,27,0	1/1:0,21:21:60.03:549,60,0	1/1:1,23:24:60.03:549,60,0	1/1:0,14:14:39.02:357,39,0	1/1:1,19:21:56.06:500,56,0	1/1:4,28:32:84.01:758,84,0	1/1:7,27:34:78.02:714,78,0	1/1:0,14:14:36.02:329,36,0
chr10	41943900	.	TGTG	T	672.38	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.350;DP=714;FS=2.060;HRun=0;HaplotypeScore=178.7692;InbreedingCoeff=0.9991;MQ=76.66;MQ0=0;MQRankSum=0.280;QD=35.39;ReadPosRankSum=0.612;VQSLOD=3.9635;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,135,3067	0/0:12,0:12:33.11:0,33,752	0/0:22,0:22:45.57:0,46,1145	0/0:20,0:20:48.12:0,48,1049	0/0:27,0:27:81.28:0,81,1868	0/0:23,0:23:69.24:0,69,1589	0/0:28,0:28:84.29:0,84,1938	0/0:22,0:22:63.22:0,63,1453	0/0:31,0:31:93.32:0,93,2104	0/0:23,0:23:66.23:0,66,1497	0/0:27,0:27:81.28:0,81,1868	0/0:22,0:22:60.21:0,60,1384	0/0:31,0:31:90.29:0,90,2029	0/0:28,0:28:84.25:0,84,1888	0/0:30,0:30:84.25:0,84,1874	0/0:37,0:37:99:0,105,2402	1/1:1,18:19:45.15:767,45,0	0/0:13,0:13:36.12:0,36,830	0/0:19,0:19:48.16:0,48,1062	0/0:20,0:20:60.21:0,60,1384	0/0:63,0:63:99:0,187,4287	0/0:17,0:17:51.18:0,51,1169	0/0:25,0:25:72.25:0,72,1637	0/0:27,0:27:81.28:0,81,1866	0/0:26,0:26:78.27:0,78,1781	0/0:25,0:25:75.26:0,75,1731	0/0:20,0:19:60.21:0,60,1383	0/0:10,0:10:30.10:0,30,691
chr10	41944026	.	GA	G	2837.63	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=7.784;DP=564;FS=7.898;HRun=9;HaplotypeScore=65.1459;InbreedingCoeff=0.9152;MQ=76.32;MQ0=1;MQRankSum=-0.596;QD=17.52;ReadPosRankSum=0.649;VQSLOD=3.4836;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:2,1:20:9.63:0,10,146	0/0:4,0:4:9.03:0,9,104	0/0:26,0:21:32.98:0,33,322	0/1:17,0:12:0.59:1,0,194	0/0:29,0:29:21.07:0,21,722	0/0:22,0:22:53.73:0,54,589	0/0:26,0:26:65.87:0,66,737	1/1:5,25:30:75.04:686,75,0	0/0:26,0:26:66.20:0,66,761	0/0:28,0:28:72.20:0,72,821	0/0:21,1:22:29.69:0,30,587	0/0:19,0:19:54.15:0,54,608	0/0:28,0:28:72.21:0,72,831	0/0:15,0:15:42.12:0,42,485	0/0:27,0:27:72.21:0,72,831	0/0:8,0:27:51.26:0,51,279	1/1:1,9:10:24:220,24,0	0/0:14,0:13:30.09:0,30,346	1/1:0,9:9:27.01:247,27,0	1/1:8,34:42:86.99:796,87,0	1/1:6,2:8:6:55,6,0	0/0:21,0:21:58.39:0,58,635	0/0:18,0:18:39.08:0,39,416	0/0:15,0:15:39.11:0,39,449	0/0:15,0:15:42.12:0,42,476	1/1:4,18:22:19.40:432,19,0	1/1:3,15:18:48.02:437,48,0	1/1:0,6:6:18.01:165,18,0
chr10	41944402	.	GA	G	1239.46	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.098;DP=585;FS=13.434;HRun=8;HaplotypeScore=71.1530;InbreedingCoeff=0.9898;MQ=85.96;MQ0=0;MQRankSum=-1.118;QD=24.30;ReadPosRankSum=1.361;VQSLOD=3.4089;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,16:17:48.08:463,48,0	0/0:5,0:5:15.05:0,15,181	0/0:19,0:19:38.59:0,39,423	0/0:19,0:19:32.20:0,32,447	0/0:15,0:15:36.11:0,36,433	0/0:36,0:36:99:0,99,1173	0/0:15,0:15:36.11:0,36,435	0/0:45,0:45:99:0,105,1226	0/0:21,0:21:57.17:0,57,689	0/0:20,0:20:57.17:0,57,688	0/0:15,0:15:42.13:0,42,507	0/0:19,0:19:57.17:0,57,679	0/0:27,0:27:72.22:0,72,865	0/0:18,0:18:45.14:0,45,542	0/0:26,0:26:75.20:0,75,873	1/1:1,33:34:92.86:898,93,0	0/0:10,0:10:27.08:0,27,326	0/0:16,0:16:45.10:0,45,527	0/0:28,0:31:77.68:0,78,871	0/0:20,0:20:54.15:0,54,642	0/0:24,0:24:69.21:0,69,833	0/0:16,0:16:39.11:0,39,461	0/0:11,0:11:24.07:0,24,290	0/0:23,0:23:66.20:0,66,794	0/0:11,0:11:33.10:0,33,397	0/0:25,0:25:75.23:0,75,906	0/0:34,0:33:90.28:0,90,1086	0/0:13,0:13:39.12:0,39,471
chr10	41945056	.	A	AT	7706.29	PASS	AB=0.820;AC=29;AF=0.518;AN=56;BaseQRankSum=-14.191;DP=565;FS=5.116;HRun=10;HaplotypeScore=52.4685;InbreedingCoeff=0.7296;MQ=72.81;MQ0=0;MQRankSum=-0.232;QD=22.53;ReadPosRankSum=-2.401;VQSLOD=4.9349;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,40:41:99:1215,114,0	0/0:10,0:10:26.96:0,27,222	0/0:11,0:11:0.06:0,0,101	0/1:10,1:11:17.64:18,0,68	0/0:29,0:30:73.93:0,74,594	0/0:15,0:15:44.95:0,45,369	0/1:14,1:15:2.03:2,0,192	1/1:11,30:41:59.51:809,60,0	0/0:28,0:28:71.91:0,72,591	1/1:4,16:20:45.05:453,45,0	1/1:5,16:22:1.63:400,2,0	0/0:18,0:18:47.94:0,48,394	0/0:27,0:27:71.84:0,72,579	0/0:12,0:12:29.96:0,30,246	1/1:3,24:27:50.48:729,50,0	1/1:3,22:25:60.15:640,60,0	0/0:22,0:24:63.99:0,64,504	1/1:5,9:14:27.07:288,27,0	0/1:6,10:17:13.37:266,0,13	1/1:3,16:19:45.07:467,45,0	1/1:3,13:16:14.47:359,14,0	0/0:19,0:19:53.92:0,54,440	0/0:12,0:12:4.18:0,4,196	0/0:17,0:17:50.93:0,51,416	1/1:1,15:16:42.11:448,42,0	1/1:3,24:27:50.48:716,50,0	1/1:1,23:24:63.16:671,63,0	1/1:0,7:7:21.05:224,21,0
chr10	41945339	.	A	AT	22364.97	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-12.311;DP=673;FS=0.842;HRun=2;HaplotypeScore=55.7446;InbreedingCoeff=0.9991;MQ=98.78;MQ0=0;MQRankSum=-9.325;QD=39.44;ReadPosRankSum=5.186;VQSLOD=4.9633;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,35:37:87.29:1253,87,0	0/0:10,0:10:27.08:0,27,335	0/0:31,0:31:87.24:0,87,1043	0/0:37,0:37:96.24:0,96,1156	0/0:28,0:28:84.26:0,84,1040	1/1:1,28:29:84.28:1210,84,0	1/1:1,20:21:57.19:821,57,0	1/1:4,31:35:96.27:1336,96,0	1/1:1,27:28:78.26:1123,78,0	1/1:0,25:25:75.23:1060,75,0	1/1:1,17:18:42.14:605,42,0	1/1:0,28:28:78.26:1123,78,0	1/1:0,23:23:60.20:864,60,0	1/1:1,31:32:84.75:1211,85,0	1/1:0,21:21:60.20:864,60,0	1/1:1,29:30:90.30:1288,90,0	1/1:1,24:25:75.25:1079,75,0	1/1:1,8:9:24.08:346,24,0	1/1:2,18:20:54.15:755,54,0	1/1:1,16:17:48.16:691,48,0	1/1:1,21:22:60.20:864,60,0	1/1:1,20:21:60.16:841,60,0	1/1:0,17:17:51.17:734,51,0	1/1:0,16:16:48.16:691,48,0	1/1:0,17:17:45.15:648,45,0	1/1:0,24:24:72.23:1016,72,0	1/1:1,33:34:81.18:1166,81,0	1/1:0,18:18:54.18:777,54,0
chr10	41945601	.	TAC	T	2179.57	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=12.252;DP=639;FS=0.000;HRun=0;HaplotypeScore=104.9773;InbreedingCoeff=0.9465;MQ=66.85;MQ0=23;MQRankSum=-3.445;QD=11.91;ReadPosRankSum=2.252;VQSLOD=3.1530;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:57.88:0,58,873	0/0:8,0:7:13.15:0,13,163	0/0:56,0:31:71.99:0,72,1024	0/0:50,0:34:71.86:0,72,911	0/0:20,0:20:54.05:0,54,820	1/1:31,0:31:42.01:390,42,0	1/1:16,0:16:17.95:155,18,0	0/0:31,0:31:75:0,75,1046	1/1:16,0:16:27.04:257,27,0	0/0:26,0:26:69.22:0,69,1061	0/0:19,0:19:45.12:0,45,646	1/1:15,1:16:15.02:141,15,0	1/1:25,0:25:42.06:398,42,0	1/1:20,2:22:42.07:403,42,0	0/0:16,0:16:45.13:0,45,616	0/0:20,0:20:54.18:0,54,785	0/0:21,0:19:51.13:0,51,687	0/0:15,0:15:23.82:0,24,377	0/0:25,0:22:44.76:0,45,681	0/0:23,0:22:57.16:0,57,813	0/0:16,0:16:36.11:0,36,488	1/1:13,0:13:15.02:142,15,0	1/1:25,0:24:29.12:400,29,0	0/1:19,0:19:0.14:99,0,0	0/0:26,0:25:57.19:0,57,861	0/0:29,0:28:72.16:0,72,1100	0/0:16,0:16:35.88:0,36,498	0/0:8,1:9:24.03:0,24,321
chr10	41945609	.	CACCA	C	5179.35	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=5.022;DP=665;FS=1.414;HRun=0;HaplotypeScore=117.8790;InbreedingCoeff=0.9770;MQ=56.92;MQ0=35;MQRankSum=-2.498;QD=27.70;ReadPosRankSum=6.550;VQSLOD=4.5729;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:61.17:0,61,1212	0/0:7,0:6:14.97:0,15,223	0/0:56,0:26:72.16:0,72,1098	0/0:60,0:31:78.53:0,79,1163	0/0:21,0:21:57.13:0,57,1087	1/1:1,27:31:42.14:825,42,0	1/1:2,14:19:17.84:338,18,0	0/0:31,0:31:90.12:0,90,1398	1/1:0,14:15:27.09:543,27,0	0/0:25,0:25:75.25:0,75,1593	0/0:21,0:19:40.78:0,41,703	1/1:1,13:14:15.05:311,15,0	1/1:2,23:25:42.14:872,42,0	1/1:2,19:22:42.14:834,42,0	0/0:17,0:17:45.15:0,45,808	0/0:22,0:22:57.20:0,57,1248	0/0:25,0:23:55.03:0,55,836	0/0:15,0:14:23.82:0,24,500	0/0:23,0:19:44.96:0,45,816	0/0:25,0:24:60.14:0,60,1108	0/0:18,0:17:36.12:0,36,706	1/1:1,12:14:15.05:292,15,0	1/1:6,20:27:50.42:937,50,0	1/1:4,13:18:7.15:228,7,0	0/0:27,0:26:60.10:0,60,1132	0/0:28,0:26:75.21:0,75,1472	0/0:16,0:16:38.92:0,39,633	0/0:11,0:11:25.68:0,26,470
chr10	41945611	.	C	CCA	4263.19	PASS	AB=0.710;AC=20;AF=0.357;AN=56;BaseQRankSum=-10.554;DP=678;FS=2.236;HRun=0;HaplotypeScore=106.5778;InbreedingCoeff=0.2784;MQ=55.88;MQ0=35;MQRankSum=2.754;QD=12.39;ReadPosRankSum=-1.690;VQSLOD=4.5881;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:18,10:30:22.76:428,23,0	0/0:5,0:6:1.01:0,1,41	0/0:57,0:26:6.02:0,6,66	0/0:61,0:30:11.81:0,12,123	0/0:20,0:21:23.90:0,24,249	0/0:31,0:31:39.77:0,40,195	0/0:19,0:19:16.87:0,17,84	1/1:27,7:34:23.99:322,24,0	0/0:15,0:15:25.57:0,26,125	0/1:14,12:27:26.93:447,0,27	0/1:15,7:21:2.16:120,0,2	0/0:14,0:14:14.20:0,14,70	0/0:25,0:25:39.77:0,40,195	0/0:22,0:22:39.53:0,40,190	0/1:10,6:18:49.05:165,0,49	0/1:8,14:22:86.28:500,0,86	1/1:18,5:21:24.05:317,24,0	1/1:8,7:14:12.04:183,12,0	0/1:15,7:19:1.32:225,0,1	0/1:14,10:24:67.64:311,0,68	1/1:7,12:18:21.07:320,21,0	0/0:14,0:14:14.16:0,14,69	0/0:29,0:28:46.36:0,46,253	0/0:16,0:18:13.96:0,14,69	0/1:14,15:28:39.03:292,0,39	0/1:19,8:27:6.58:296,0,7	0/1:13,2:15:15.33:168,0,15	0/1:5,6:12:4.42:170,0,4
chr10	41946154	.	C	CTCTCTCTCTCT	3230.05	PASS	AB=0.996;AC=22;AF=0.393;AN=56;BaseQRankSum=1.337;DP=581;FS=2.978;HRun=0;HaplotypeScore=184.6035;InbreedingCoeff=0.3517;MQ=52.99;MQ0=50;MQRankSum=-4.547;QD=10.45;ReadPosRankSum=-4.211;VQSLOD=1.8526;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:26:31.81:0,32,379	0/0:4,0:3:9.03:0,9,114	0/0:14,0:4:9.03:0,9,114	0/0:22,0:13:14.62:0,15,190	0/0:32,0:30:55.69:0,56,680	0/1:28,0:24:36.89:164,0,37	0/1:18,0:11:18.29:335,0,18	0/0:43,0:42:0.03:0,0,782	1/1:19,0:15:18.98:400,19,0	0/1:24,0:22:47.68:48,0,251	0/0:17,0:16:31.21:0,31,485	1/1:17,0:17:27.47:409,27,0	1/1:14,0:17:20.35:576,20,0	1/1:17,0:17:26.92:559,27,0	0/1:19,0:13:2.49:2,0,278	0/1:23,0:19:99:126,0,307	0/1:11,0:11:3.72:4,0,120	0/0:9,0:6:6.02:0,6,101	0/1:27,0:25:99:397,0,231	0/0:27,0:27:20.65:0,21,480	0/0:16,0:13:18.06:0,18,224	1/1:5,16:18:8.67:59,9,0	1/1:23,0:16:8.12:44,8,0	1/1:17,0:15:15.52:201,16,0	0/0:21,0:19:36.10:0,36,444	0/0:23,0:21:30.33:0,30,404	0/1:23,0:22:93.36:93,0,398	0/0:15,0:9:12.02:0,12,135
chr10	41946164	.	C	CT	703.55	PASS	AB=0.752;AC=12;AF=0.214;AN=56;BaseQRankSum=5.270;DP=546;FS=7.237;HRun=1;HaplotypeScore=91.2757;InbreedingCoeff=-0.0863;MQ=45.03;MQ0=56;MQRankSum=-4.105;QD=3.11;ReadPosRankSum=-0.679;VQSLOD=-0.6141;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:21:28.83:0,29,413	0/0:6,0:5:12.04:0,12,152	0/0:11,0:3:9.03:0,9,114	0/0:20,0:9:15.52:0,16,191	0/0:29,0:27:61.73:0,62,741	0/1:20,11:26:56.38:56,0,233	0/1:10,9:12:99:109,0,127	0/0:43,0:42:71.37:0,71,1156	0/1:6,15:17:99:116,0,159	0/0:20,0:18:44.16:0,44,532	0/0:19,0:18:41.45:0,41,521	0/1:9,9:17:99:129,0,126	0/1:14,3:16:99:157,0,248	0/1:9,11:18:97.66:144,0,98	0/0:18,0:12:30.09:0,30,373	0/1:21,1:18:1.84:2,0,376	0/0:10,0:10:14.98:0,15,191	0/0:11,0:8:5.23:0,5,45	0/1:23,0:21:4.06:4,0,541	0/0:22,0:22:30.40:0,30,478	0/0:18,0:14:26.92:0,27,329	1/1:15,3:15:6.41:40,6,0	0/1:5,17:15:26.89:33,0,27	0/1:12,3:13:59.51:60,0,169	0/0:19,0:17:42.12:0,42,520	0/0:18,0:16:42.13:0,42,524	0/0:19,0:18:48.14:0,48,586	0/0:12,0:4:12.02:0,12,138
chr10	41948539	.	TGC	T	26338.34	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-0.583;DP=765;FS=1.722;HRun=0;HaplotypeScore=96.8059;InbreedingCoeff=0.9970;MQ=83.30;MQ0=5;MQRankSum=-9.175;QD=37.31;ReadPosRankSum=5.167;VQSLOD=7.0848;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,33:36:87.29:1280,87,0	0/0:12,0:12:33.11:0,33,592	0/0:23,0:23:63.21:0,63,1106	0/0:24,0:24:66.23:0,66,1201	1/1:1,34:34:84.28:1237,84,0	1/1:1,19:20:51.17:751,51,0	1/1:0,27:27:75.25:1104,75,0	1/1:2,30:32:87.29:1277,87,0	1/1:1,29:30:72.24:1060,72,0	1/1:0,46:46:99:1983,135,0	1/1:1,18:19:51.17:751,51,0	1/1:1,34:35:90.30:1325,90,0	1/1:1,31:31:81.27:1193,81,0	1/1:1,25:26:60.20:883,60,0	1/1:0,24:24:60.20:884,60,0	1/1:1,20:20:48.16:707,48,0	1/1:2,24:26:63.21:927,63,0	1/1:1,8:9:18.06:265,18,0	1/1:2,17:19:51.17:750,51,0	1/1:0,40:40:96.32:1414,96,0	1/1:1,26:27:63.21:928,63,0	1/1:1,28:28:69.23:1016,69,0	1/1:1,40:40:99:1546,105,0	1/1:4,24:28:63.21:927,63,0	1/1:1,21:22:57.19:839,57,0	1/1:1,35:36:99:1524,105,0	1/1:1,28:29:75.25:1104,75,0	1/1:0,17:17:45.15:663,45,0
chr10	41948922	.	T	TCATA	18419.56	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=1.273;DP=682;FS=1.801;HRun=0;HaplotypeScore=138.9333;InbreedingCoeff=0.9398;MQ=58.93;MQ0=12;MQRankSum=-2.258;QD=31.81;ReadPosRankSum=0.892;VQSLOD=5.1122;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:33:56.88:0,57,892	0/0:13,0:13:39.13:0,39,649	0/0:20,0:13:12.04:0,12,202	0/0:17,0:8:9.03:0,9,152	1/1:27,0:27:36.07:799,36,0	1/1:24,0:24:56.60:1109,57,0	1/1:20,0:19:42.14:1014,42,0	1/1:36,0:31:42.10:790,42,0	1/1:30,0:30:67.10:1025,67,0	1/1:7,27:35:84.29:1997,84,0	1/1:8,19:27:30.10:646,30,0	1/1:13,0:13:29.24:489,29,0	1/1:27,0:27:55.92:1025,56,0	1/1:20,0:20:49.83:825,50,0	1/1:7,24:32:24.08:597,24,0	0/0:20,0:20:45.15:0,45,760	1/1:20,0:23:36.10:668,36,0	1/1:7,0:8:13.60:270,14,0	1/1:9,14:22:45.15:1035,45,0	1/1:16,20:37:42.14:910,42,0	1/1:3,14:19:15.05:373,15,0	1/1:26,0:26:50.38:926,50,0	1/1:23,0:23:50.21:984,50,0	1/1:19,2:21:5.87:320,6,0	1/1:5,19:25:18.06:417,18,0	1/1:27,0:27:45.62:954,46,0	1/1:15,24:40:15.05:341,15,0	1/1:14,0:14:39.13:906,39,0
chr10	41948935	.	CATA	C	7868.50	PASS	AB=0.931;AC=30;AF=0.536;AN=56;BaseQRankSum=7.951;DP=689;FS=7.362;HRun=0;HaplotypeScore=173.4656;InbreedingCoeff=0.4057;MQ=51.36;MQ0=15;MQRankSum=-2.394;QD=16.29;ReadPosRankSum=4.012;VQSLOD=3.9852;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:28.75:0,29,1122	0/0:14,0:14:42.14:0,42,844	0/0:11,0:4:12.04:0,12,168	0/0:13,0:4:9.03:0,9,126	1/1:22,10:32:35.95:422,36,0	1/1:18,6:24:57.17:719,57,0	1/1:15,7:20:44.82:513,45,0	0/1:45,0:32:99:198,0,566	1/1:15,11:26:69.21:918,69,0	0/1:35,0:34:99:361,0,619	0/1:25,0:25:99:168,0,461	1/1:9,7:16:33.10:446,33,0	1/1:17,12:30:60.16:756,60,0	1/1:12,13:25:51.13:643,51,0	0/0:30,0:30:36.12:0,36,524	0/0:24,0:24:66.22:0,66,1209	1/1:22,0:22:31.14:281,31,0	0/1:6,3:9:56.61:108,0,57	0/1:24,0:22:99:237,0,339	0/1:43,0:43:99:204,0,857	0/0:22,0:22:30.06:0,30,466	1/1:16,9:25:51.01:646,51,0	1/1:15,9:24:51.14:611,51,0	1/1:11,4:15:12.74:182,13,0	0/0:27,0:27:13.60:0,14,431	0/1:25,0:25:99:159,0,161	0/0:34,0:33:24.08:0,24,379	0/1:9,7:15:99:294,0,156
chr10	41948938	.	A	ACAT	7686.53	PASS	AB=0.954;AC=35;AF=0.625;AN=56;BaseQRankSum=14.002;DP=662;FS=5.011;HRun=0;HaplotypeScore=172.1300;InbreedingCoeff=0.1550;MQ=51.33;MQ0=15;MQRankSum=-1.162;QD=13.46;ReadPosRankSum=6.919;VQSLOD=4.1321;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:28:68.57:0,69,1207	0/0:15,0:15:42.08:0,42,772	0/0:11,0:4:12.04:0,12,223	0/0:12,0:3:9.03:0,9,167	1/1:17,0:31:36.05:398,36,0	1/1:18,0:24:51.77:564,52,0	1/1:16,0:20:43.12:436,43,0	0/1:31,0:28:99:180,0,723	1/1:20,0:25:53.31:517,53,0	0/1:35,0:34:99:654,0,129	0/1:24,0:24:99:315,0,213	1/1:11,0:16:26.83:270,27,0	1/1:22,0:31:52.16:481,52,0	1/1:16,0:26:40.42:369,40,0	0/1:28,0:28:99:201,0,143	0/0:25,0:25:72.23:0,72,1205	1/1:15,0:20:19.81:344,20,0	0/1:7,0:9:37.76:75,0,38	0/1:22,0:22:99:322,0,188	0/1:36,0:37:99:402,0,580	0/1:20,0:21:99:118,0,194	1/1:17,0:25:45.73:497,46,0	1/1:18,0:24:44.06:411,44,0	1/1:13,0:14:17.84:185,18,0	0/1:27,0:27:99:149,0,191	1/1:2,1:24:20.39:375,20,0	0/1:29,0:28:92.15:92,0,155	0/1:15,0:15:6.41:331,0,6
chr10	41948941	.	AC	A	3557.48	PASS	AB=0.939;AC=24;AF=0.429;AN=56;BaseQRankSum=9.197;DP=670;FS=1.153;HRun=1;HaplotypeScore=167.6782;InbreedingCoeff=-0.0019;MQ=51.49;MQ0=16;MQRankSum=0.781;QD=7.52;ReadPosRankSum=3.668;VQSLOD=1.0978;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:75.50:0,76,1106	0/0:16,0:16:45.15:0,45,709	0/0:11,0:4:12.04:0,12,178	0/0:11,0:3:9.02:0,9,108	0/1:32,3:35:65.63:191,0,66	0/1:20,3:23:4.42:272,0,4	1/1:20,1:19:33.86:337,34,0	0/1:33,8:28:76.36:76,0,775	1/1:19,4:23:40.11:274,40,0	0/1:38,0:37:99:351,0,671	0/0:25,0:25:5.29:0,5,566	0/1:16,2:18:39.20:105,0,39	0/1:27,4:31:93.20:253,0,93	1/1:23,2:25:11.89:210,12,0	0/0:28,0:28:39.04:0,39,531	0/0:25,0:25:72.25:0,72,1131	1/1:17,2:19:39.58:388,40,0	0/1:9,1:10:53.97:54,0,136	0/1:23,0:22:99:149,0,402	0/1:38,0:38:72.88:73,0,1102	0/0:23,0:23:38.63:0,39,540	0/1:22,4:26:10.83:207,0,11	1/1:23,2:25:17.71:298,18,0	0/1:14,0:14:27.08:79,0,27	0/1:27,0:27:2.64:3,0,507	0/1:20,0:20:40.72:41,0,279	0/0:28,0:27:26.57:0,27,356	0/1:15,1:15:99:197,0,142
chr10	41948945	.	ACATAC	A	5837.12	PASS	AB=0.911;AC=26;AF=0.464;AN=56;BaseQRankSum=10.035;DP=673;FS=12.838;HRun=0;HaplotypeScore=198.2203;InbreedingCoeff=0.5287;MQ=51.45;MQ0=17;MQRankSum=-2.993;QD=14.85;ReadPosRankSum=-1.513;VQSLOD=3.4228;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:33:71.13:0,71,1889	0/0:16,0:16:45.63:0,46,1300	0/0:7,0:1:3.01:0,3,46	0/0:9,0:2:6.02:0,6,77	1/1:25,7:34:40.72:340,41,0	1/1:16,4:22:53.72:539,54,0	1/1:14,1:19:44.58:402,45,0	0/1:43,0:30:49.06:49,0,1101	1/1:14,10:25:62.86:900,63,0	0/1:37,0:36:93.83:94,0,2004	0/0:21,0:21:20.79:0,21,1332	1/1:13,6:20:29.81:368,30,0	1/1:20,9:31:76.22:851,76,0	1/1:13,9:26:65.49:771,65,0	0/0:29,0:29:42.14:0,42,1324	0/0:24,0:24:72.25:0,72,2074	0/1:21,0:21:42.55:43,0,299	0/1:7,0:10:47.55:48,0,205	0/1:22,0:20:70.58:71,0,805	0/0:40,0:40:43.79:0,44,2683	0/0:24,0:24:41.81:0,42,1291	1/1:17,9:26:44.56:469,45,0	1/1:17,5:26:51.57:606,52,0	1/1:10,2:13:14.49:108,14,0	0/0:29,0:29:51.17:0,51,1402	0/0:20,0:20:32.89:0,33,911	0/0:28,0:27:27.09:0,27,873	0/1:9,0:15:99:179,0,360
chr10	41948949	.	AC	A	2007.21	PASS	AB=0.823;AC=11;AF=0.196;AN=56;BaseQRankSum=8.513;DP=661;FS=17.353;HRun=1;HaplotypeScore=170.6220;InbreedingCoeff=-0.0530;MQ=51.83;MQ0=17;MQRankSum=-7.473;QD=8.19;ReadPosRankSum=-1.814;VQSLOD=-0.6361;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:30:61.56:0,62,1120	0/0:15,0:15:42.61:0,43,665	0/0:8,0:2:4.78:0,5,25	0/0:9,0:2:3.01:0,3,40	0/1:19,17:36:97.57:246,0,98	0/1:18,3:21:99:142,0,133	0/1:17,3:18:37.43:37,0,125	0/0:41,0:28:79.61:0,80,1156	0/1:21,4:25:99:389,0,119	0/0:36,0:35:99:0,105,1549	0/0:21,0:21:47.63:0,48,740	0/1:17,3:20:48.77:158,0,49	0/1:27,5:32:72.88:373,0,73	1/1:17,9:26:12.89:392,13,0	0/0:27,0:27:42.14:0,42,667	0/0:25,0:25:75.26:0,75,1181	0/0:23,0:23:32.28:0,32,471	0/0:10,0:10:12.87:0,13,171	0/0:20,0:18:54.18:0,54,813	0/0:42,0:42:98.05:0,98,1516	0/0:23,0:23:41.76:0,42,667	0/1:21,3:24:99:145,0,117	0/1:18,10:28:99:261,0,132	0/1:9,4:13:15.61:16,0,40	0/0:29,0:29:54.17:0,54,820	0/0:16,0:16:45.13:0,45,580	0/0:26,0:25:27.09:0,27,430	0/0:15,0:14:18.03:0,18,245
chr10	41952717	.	TAGA	T	1975.79	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.093;DP=671;FS=1.990;HRun=0;HaplotypeScore=91.8243;InbreedingCoeff=0.9953;MQ=84.89;MQ0=0;MQRankSum=-4.246;QD=40.32;ReadPosRankSum=2.838;VQSLOD=5.0184;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,26:28:66.23:1125,66,0	0/0:16,0:16:42.14:0,42,926	0/0:27,0:28:75.52:0,76,1589	0/0:23,0:23:63.22:0,63,1396	0/0:21,0:21:57.20:0,57,1315	0/0:23,0:23:69.24:0,69,1591	0/0:22,0:22:66.21:0,66,1478	0/0:36,0:36:96.32:0,96,2150	0/0:28,0:28:84.27:0,84,1892	0/0:24,0:24:69.24:0,69,1583	0/0:24,0:24:72.25:0,72,1661	0/0:20,0:20:60.21:0,60,1384	0/0:31,0:31:93.32:0,93,2144	0/0:19,0:19:54.19:0,54,1245	0/0:35,0:35:99:0,102,2349	1/1:0,21:21:57.20:972,57,0	0/0:26,0:26:72.23:0,72,1590	0/0:9,0:9:27.09:0,27,622	0/0:15,0:15:45.15:0,45,1038	0/0:26,0:26:75.24:0,75,1664	0/0:27,0:27:81.26:0,81,1821	0/0:27,0:27:78.27:0,78,1797	0/0:28,0:28:84.27:0,84,1773	0/0:19,0:19:57.03:0,57,1260	0/0:22,0:22:63.22:0,63,1436	0/0:34,0:34:99:0,102,2357	0/0:30,0:30:90.31:0,90,2050	0/0:9,0:9:18.05:0,18,415
chr10	41955173	.	AG	A	702.21	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.585;DP=655;FS=14.426;HRun=1;HaplotypeScore=61.5369;InbreedingCoeff=0.9957;MQ=86.52;MQ0=1;MQRankSum=-2.938;QD=31.92;ReadPosRankSum=1.652;VQSLOD=2.0270;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:57.19:0,57,911	0/0:7,0:7:21.07:0,21,336	0/0:22,0:22:62.81:0,63,953	0/0:21,0:21:60.17:0,60,915	0/0:27,0:27:81.28:0,81,1295	0/0:26,0:26:78.25:0,78,1213	0/0:16,0:16:48.16:0,48,757	0/0:34,0:34:99:0,102,1591	0/0:25,0:25:75.24:0,75,1176	0/0:29,0:29:87.29:0,87,1350	0/0:33,0:33:99:0,99,1580	0/0:17,0:17:51.17:0,51,815	0/0:27,0:27:81.28:0,81,1285	0/0:25,0:25:75.24:0,75,1176	0/0:23,0:23:69.22:0,69,1063	0/0:17,0:17:51.16:0,51,789	1/1:0,22:20:57.19:797,57,0	0/0:16,0:16:48.15:0,48,743	0/0:20,0:20:60.20:0,60,960	0/0:45,0:45:99:0,135,2083	0/0:32,0:32:93.32:0,93,1487	0/0:22,0:22:66.19:0,66,1007	0/0:33,0:33:96.31:0,96,1505	0/0:23,0:23:66.21:0,66,1031	0/0:21,0:21:63.21:0,63,1007	0/0:18,0:18:54.17:0,54,833	0/0:23,0:23:69.24:0,69,1102	0/0:11,0:11:33.11:0,33,527
chr10	41955978	.	AGAGTGT	A	1679.80	PASS	AB=0.866;AC=14;AF=0.250;AN=56;BaseQRankSum=-0.900;DP=538;FS=0.493;HRun=0;HaplotypeScore=138.7843;InbreedingCoeff=0.5883;MQ=63.72;MQ0=21;MQRankSum=-5.105;QD=8.32;ReadPosRankSum=0.158;VQSLOD=2.6583;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:19:2.22:7,2,0	0/0:2,0:2:6.01:0,6,125	0/0:30,0:20:56.75:0,57,567	0/0:19,0:11:22.62:0,23,217	0/0:24,0:24:54.73:0,55,439	0/1:24,0:24:33.90:34,0,337	0/0:16,0:16:33.86:0,34,281	0/0:23,0:21:53.98:0,54,489	0/0:16,0:16:38.91:0,39,390	1/1:0,18:18:41.61:408,42,0	0/1:1,16:19:0.02:0,0,0	0/0:17,0:16:32.81:0,33,363	0/0:12,0:12:32.27:0,32,303	0/0:17,0:16:44.59:0,45,465	1/1:1,19:19:9.01:167,9,0	0/1:25,0:23:3.35:3,0,120	1/1:26,0:28:74.49:640,74,0	0/1:19,1:20:36.85:339,0,37	0/0:17,0:16:29.90:0,30,374	0/0:23,0:22:54.01:0,54,639	0/0:18,0:17:32.95:0,33,321	0/0:17,0:17:34.03:0,34,299	0/0:17,0:17:32.99:0,33,406	0/0:30,0:30:71.82:0,72,950	1/1:2,21:25:6:242,6,0	0/0:21,0:21:60.05:0,60,679	0/0:14,0:14:9.87:0,10,334	0/0:3,0:3:5.99:0,6,50
chr10	41955980	.	AGT	A	976.29	PASS	AB=0.963;AC=37;AF=0.771;AN=48;BaseQRankSum=1.875;DP=554;FS=8.286;HRun=0;HaplotypeScore=114.2574;InbreedingCoeff=0.0635;MQ=62.07;MQ0=24;MQRankSum=-1.387;QD=2.13;ReadPosRankSum=-0.766;VQSLOD=1.6001;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:20:2.80:13,3,0	0/0:3,0:3:3.47:0,3,26	./.	./.	1/1:20,5:26:20.85:194,21,0	1/1:18,1:24:8.69:60,9,0	0/1:15,0:17:0.02:0,0,0	./.	1/1:14,4:18:9.02:96,9,0	1/1:18,0:18:2.43:13,2,0	0/1:19,0:19:0.01:0,0,0	0/1:15,2:16:40.98:52,0,41	1/1:9,2:12:3.01:32,3,0	0/1:18,1:18:18.18:43,0,18	1/1:20,0:19:5.68:28,6,0	1/1:24,0:24:9.61:53,10,0	1/1:28,0:27:5.68:28,6,0	0/1:19,0:19:7.59:8,0,18	0/0:19,0:17:0:0,0,0	1/1:17,5:22:11.99:128,12,0	1/1:21,0:19:5.98:47,6,0	1/1:17,0:18:5.81:34,6,0	0/1:17,0:17:30.63:31,0,87	0/1:31,0:31:14.66:15,0,173	1/1:25,0:25:11.32:55,11,0	1/1:19,3:22:6:57,6,0	1/1:7,6:14:11.86:110,12,0	./.
chr10	41955981	.	GTGT	G	251.67	PASS	AB=1.000;AC=8;AF=0.143;AN=56;BaseQRankSum=8.752;DP=563;FS=22.391;HRun=0;HaplotypeScore=124.1347;InbreedingCoeff=0.4048;MQ=61.57;MQ0=24;MQRankSum=-3.755;QD=1.76;ReadPosRankSum=-0.094;VQSLOD=0.4882;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,0:22:3.01:38,3,0	0/0:3,0:3:7.27:0,7,111	0/0:30,0:20:57.17:0,57,711	0/0:18,0:10:29.84:0,30,334	0/1:26,0:26:10.48:10,0,198	0/0:24,0:24:18.13:0,18,243	0/0:16,0:16:32.61:0,33,219	0/0:25,0:22:54.13:0,54,671	0/0:18,0:18:15.22:0,15,184	0/0:19,0:19:25.04:0,25,339	0/1:21,0:21:0.01:0,0,0	0/0:18,0:17:12.67:0,13,172	0/0:12,0:12:22.33:0,22,228	0/0:19,0:18:31.06:0,31,286	0/1:20,0:19:20.10:30,0,20	1/1:2,21:23:13.42:238,13,0	0/0:28,0:27:22.62:0,23,510	0/0:19,0:19:31.72:0,32,524	0/0:19,0:17:45.06:0,45,534	0/0:23,0:22:53.11:0,53,579	0/0:23,0:21:39.56:0,40,486	0/0:18,0:18:20.89:0,21,204	0/0:17,0:17:27.62:0,28,202	0/0:33,0:33:58.19:0,58,490	0/1:25,0:25:23.24:63,0,23	0/0:20,0:20:53.28:0,53,642	0/0:15,0:15:24.38:0,24,308	0/0:3,0:3:6.02:0,6,77
chr10	41956201	.	GT	G	7820.67	PASS	AB=0.867;AC=51;AF=0.911;AN=56;BaseQRankSum=-0.126;DP=530;FS=26.840;HRun=11;HaplotypeScore=67.7776;InbreedingCoeff=0.7078;MQ=73.87;MQ0=0;MQRankSum=-5.366;QD=15.30;ReadPosRankSum=3.412;VQSLOD=3.6410;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,26:30:68.91:566,69,0	0/0:7,0:7:18.03:0,18,184	0/1:11,2:13:25.24:25,0,163	0/0:12,0:12:23.46:0,23,216	1/1:3,0:26:42.77:124,43,0	1/1:4,15:20:43.91:351,44,0	1/1:0,21:22:65.67:529,66,0	1/1:6,26:32:74.84:607,75,0	1/1:4,9:13:4.17:190,4,0	1/1:1,0:22:38.48:113,38,0	1/1:3,0:20:23.94:70,24,0	1/1:1,14:15:26.95:222,27,0	1/1:2,16:18:12.97:313,13,0	1/1:3,19:21:50.92:419,51,0	1/1:2,0:24:36.66:108,37,0	1/1:2,23:25:59.93:493,60,0	1/1:0,22:23:61.97:499,62,0	1/1:2,0:12:20.37:60,20,0	1/1:6,20:26:42.99:468,43,0	1/1:5,16:21:47.93:394,48,0	1/1:1,11:14:31.27:251,31,0	1/1:3,15:18:44.92:369,45,0	1/1:1,13:14:35.95:296,36,0	1/1:3,20:24:58.97:474,59,0	1/1:2,0:19:30.55:90,31,0	1/1:4,20:25:61.92:496,62,0	1/1:0,9:9:23.97:197,24,0	1/1:0,4:4:11.99:99,12,0
chr10	41957650	.	CATGATGATG	C	6531.62	PASS	AC=48;AF=0.923;AN=52;BaseQRankSum=1.753;DP=850;FS=0.000;HRun=0;HaplotypeScore=277.6044;InbreedingCoeff=0.4825;MQ=68.64;MQ0=18;MQRankSum=-3.006;QD=9.29;ReadPosRankSum=0.247;VQSLOD=2.8447;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:35:0.47:1,0,0	0/0:9,0:13:12.51:0,13,214	./.	0/0:61,0:34:0.47:0,0,1	1/1:17,0:23:2.74:63,3,0	1/1:15,5:20:12.04:237,12,0	1/1:23,8:31:6.01:145,6,0	./.	1/1:26,17:43:21.06:421,21,0	1/1:33,0:35:20.94:325,21,0	1/1:19,0:24:8.26:124,8,0	1/1:22,20:42:44.81:777,45,0	1/1:18,21:39:29.70:588,30,0	1/1:15,11:27:17.73:311,18,0	1/1:30,0:39:39.82:656,40,0	1/1:17,0:33:17.92:341,18,0	1/1:23,0:27:10.99:144,11,0	1/1:9,6:15:6.02:162,6,0	1/1:21,0:23:9.03:189,9,0	1/1:21,0:27:20.86:347,21,0	1/1:34,0:36:8.62:102,9,0	1/1:26,0:38:7.60:73,8,0	1/1:13,4:20:21.07:359,21,0	1/1:30,0:38:6.02:126,6,0	1/1:14,0:24:17.98:182,18,0	1/1:18,0:23:18.20:320,18,0	1/1:20,0:29:26.68:490,27,0	1/1:6,0:8:3.01:50,3,0
chr10	41957710	.	AACG	A	6010.83	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=6.798;DP=806;FS=5.633;HRun=0;HaplotypeScore=202.1952;InbreedingCoeff=0.9656;MQ=52.27;MQ0=22;MQRankSum=-0.168;QD=17.42;ReadPosRankSum=-0.595;VQSLOD=3.9661;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:76.16:0,76,983	0/0:11,0:11:30.06:0,30,527	0/0:32,0:14:42.07:0,42,756	0/0:24,0:12:25.94:0,26,485	0/0:19,0:19:29.69:0,30,317	0/0:28,0:28:74.74:0,75,1359	0/0:40,0:39:87.26:0,87,1708	1/1:12,18:27:50.94:616,51,0	0/0:41,0:41:86.49:0,86,1490	1/1:5,32:37:99:1359,99,0	1/1:3,17:20:17.93:193,18,0	0/0:44,0:44:81.04:0,81,1438	0/0:41,0:41:74.96:0,75,1307	0/0:30,0:29:62.56:0,63,1022	1/1:5,27:32:29.79:305,30,0	0/0:33,0:33:65.50:0,66,761	1/1:4,17:21:11.97:150,12,0	1/1:17,0:16:33.01:419,33,0	1/1:15,18:31:53.67:546,54,0	1/1:3,31:34:74.52:716,75,0	1/1:7,34:39:14.94:184,15,0	0/0:22,0:22:32.56:0,33,579	0/0:19,0:19:39.11:0,39,691	0/0:34,0:34:57.72:0,58,1012	1/1:7,15:22:14.96:165,15,0	1/1:4,17:21:56.18:777,56,0	1/1:5,27:32:41.95:535,42,0	1/1:2,3:5:3.01:44,3,0
chr10	41958760	.	G	GGAA	824.67	PASS	AB=0.800;AC=33;AF=0.971;AN=34;BaseQRankSum=-0.625;DP=38;FS=3.160;HRun=0;HaplotypeScore=11.2237;InbreedingCoeff=-0.1389;MQ=116.09;MQ0=0;MQRankSum=-2.069;QD=24.25;ReadPosRankSum=-0.144;VQSLOD=2.5993;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,0:3:2.97:20,3,0	./.	1/1:2,0:3:5.99:72,6,0	0/1:3,0:4:8.66:9,0,39	1/1:1,0:2:5.23:50,5,0	1/1:1,0:1:3.01:50,3,0	1/1:0,2:2:6.02:118,6,0	1/1:2,0:2:3.01:55,3,0	./.	1/1:1,1:2:6.02:94,6,0	./.	./.	./.	1/1:0,1:1:3.01:55,3,0	1/1:4,0:4:6.01:75,6,0	./.	1/1:2,0:2:2.98:22,3,0	./.	1/1:1,0:1:3.01:40,3,0	1/1:1,0:1:3:25,3,0	1/1:3,0:3:9:128,9,0	./.	1/1:1,0:1:3.01:53,3,0	./.	1/1:1,0:1:2.98:21,3,0	./.	1/1:1,0:1:2.99:24,3,0	./.
chr10	41959587	.	CAGAG	C	3968.39	PASS	AC=32;AF=0.615;AN=52;BaseQRankSum=-1.980;DP=313;FS=14.221;HRun=0;HaplotypeScore=75.9065;InbreedingCoeff=0.8214;MQ=75.63;MQ0=5;MQRankSum=0.112;QD=26.46;ReadPosRankSum=3.164;VQSLOD=1.9882;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	0/0:4,0:4:5.97:0,6,93	0/0:27,0:21:19.52:0,20,158	0/0:38,0:18:22.97:0,23,347	1/1:1,0:5:5.94:40,6,0	1/1:1,6:7:15.05:249,15,0	1/1:3,11:14:20.99:316,21,0	0/0:29,0:28:33.43:0,33,401	1/1:1,9:10:18.06:299,18,0	1/1:5,5:10:15.05:248,15,0	1/1:4,13:17:27.09:444,27,0	1/1:1,9:10:18.06:300,18,0	1/1:2,6:8:18.06:282,18,0	1/1:4,8:12:18.06:299,18,0	1/1:1,5:6:12.04:200,12,0	1/1:8,0:8:3:28,3,0	0/0:7,0:7:3.01:0,3,47	1/1:0,8:8:24.08:399,24,0	0/0:10,0:10:16.18:0,16,147	0/0:18,0:18:11.87:0,12,103	./.	1/1:1,6:7:11.93:165,12,0	1/1:1,11:12:24.08:398,24,0	1/1:2,3:5:8.94:150,9,0	1/1:2,9:11:9.03:150,9,0	0/0:7,0:7:11.95:0,12,144	0/0:15,0:14:7.78:0,8,82	0/0:2,0:2:2.98:0,3,22
chr10	41959597	.	GAGAGAGAGAGAGAC	G	47.90	PASS	AC=2;AF=0.037;AN=54;BaseQRankSum=2.373;DP=377;FS=0.000;HRun=0;HaplotypeScore=134.2981;InbreedingCoeff=0.3630;MQ=59.78;MQ0=18;MQRankSum=-1.660;QD=6.84;ReadPosRankSum=0.885;VQSLOD=2.0618;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/0:4,0:4:9.03:0,9,338	0/0:40,0:18:17.90:0,18,446	0/0:69,0:18:36.98:0,37,717	0/0:7,0:7:2.19:0,2,126	0/0:8,0:8:15.05:0,15,485	0/0:15,0:15:27.09:0,27,894	0/0:32,0:30:69.16:0,69,1664	0/0:10,0:10:24.01:0,24,695	0/0:12,0:12:26.98:0,27,515	0/0:18,0:18:27.09:0,27,681	0/0:12,0:12:18.06:0,18,588	0/0:10,0:10:16.38:0,16,463	0/0:11,0:11:18.06:0,18,558	0/0:6,0:6:15.05:0,15,521	1/1:1,6:7:3.01:125,3,0	0/0:9,0:9:12.04:0,12,505	0/0:8,0:8:24.08:0,24,856	0/0:10,0:7:16.26:0,16,213	0/0:15,0:15:15.60:0,16,229	0/0:7,0:7:15.05:0,15,530	0/0:8,0:8:18.01:0,18,512	0/0:13,0:13:24.03:0,24,711	0/0:5,0:5:1.48:0,1,283	0/0:9,0:9:9.03:0,9,321	0/0:10,0:10:24.04:0,24,904	0/0:17,0:16:22.17:0,22,361	0/0:2,0:2:2.98:0,3,22
chr10	41959609	.	GAC	G	215.16	PASS	AB=0.962;AC=14;AF=0.250;AN=56;BaseQRankSum=1.826;DP=430;FS=13.877;HRun=0;HaplotypeScore=84.1747;InbreedingCoeff=-0.0686;MQ=50.22;MQ0=27;MQRankSum=-1.215;QD=0.80;ReadPosRankSum=-2.342;VQSLOD=0.3683;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,0:5:2.96:19,3,0	0/0:3,0:3:5.98:0,6,78	0/1:51,0:17:20.77:21,0,139	0/1:95,0:19:7.69:8,0,168	0/1:7,0:7:24.68:25,0,31	0/0:10,0:10:15.02:0,15,75	0/0:15,0:15:17.15:0,17,106	0/1:28,0:26:82.99:83,0,262	0/0:12,0:12:13.66:0,14,67	0/0:10,0:10:20.71:0,21,107	0/0:18,0:18:18.87:0,19,67	0/0:12,0:12:10.91:0,11,35	0/1:9,0:9:15.37:25,0,15	0/0:11,0:11:11.99:0,12,51	0/0:6,0:6:11.36:0,11,52	1/1:6,0:6:2.94:18,3,0	0/0:11,0:11:17.84:0,18,158	0/0:9,0:9:22.57:0,23,91	0/1:11,1:8:14.60:68,0,15	0/1:15,2:17:38.92:39,0,70	0/1:9,0:9:1.12:1,0,121	0/0:9,0:9:12.82:0,13,69	0/0:16,0:16:16.23:0,16,63	0/0:6,0:6:5.35:0,5,38	0/0:9,0:9:5.71:0,6,18	0/1:10,2:12:12.86:13,0,216	0/1:17,1:17:42.73:43,0,83	0/0:3,0:3:5.48:0,5,32
chr10	41960720	.	CTATT	C	4915.70	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=12.330;DP=747;FS=0.875;HRun=0;HaplotypeScore=123.5191;InbreedingCoeff=0.9998;MQ=86.07;MQ0=0;MQRankSum=-3.586;QD=41.31;ReadPosRankSum=3.884;VQSLOD=5.4249;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,59:58:99:2254,117,0	0/0:12,0:12:36.12:0,36,1007	0/0:31,0:31:87.04:0,87,2013	0/0:21,0:21:60.02:0,60,1324	1/1:0,36:36:81.27:1526,81,0	0/0:29,0:29:84.27:0,84,2212	0/0:25,0:25:75.25:0,75,2007	0/0:23,0:23:66.21:0,66,1706	0/0:14,0:14:42.14:0,42,1139	0/0:33,0:33:96.32:0,96,2577	0/0:20,0:20:60.20:0,60,1620	0/0:28,0:28:84.29:0,84,2335	0/0:28,0:28:78.21:0,78,1816	0/0:26,0:26:78.23:0,78,1957	0/0:36,0:35:99:0,108,2884	1/1:0,24:24:56.80:1135,57,0	0/0:22,0:22:66.20:0,66,1745	0/0:19,0:19:57.20:0,57,1579	0/0:19,0:19:57.18:0,57,1416	0/0:38,0:38:99:0,111,2999	0/0:37,0:36:99:0,111,2999	0/0:26,0:26:78.27:0,78,2172	0/0:22,0:22:66.13:0,66,1640	0/0:26,0:26:75.25:0,75,2029	0/0:24,0:24:72.24:0,72,1916	0/0:22,0:22:66.21:0,66,1684	0/0:37,0:37:99:0,111,2887	0/0:10,0:10:30.10:0,30,771
chr10	41960993	.	A	AT	5305.21	PASS	AB=0.590;AC=15;AF=0.268;AN=56;BaseQRankSum=-14.337;DP=618;FS=1.574;HRun=6;HaplotypeScore=55.5253;InbreedingCoeff=0.9025;MQ=80.61;MQ0=0;MQRankSum=0.183;QD=29.47;ReadPosRankSum=-2.040;VQSLOD=4.6810;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:78.14:0,78,784	0/0:9,0:9:24.05:0,24,245	0/0:20,0:20:30.99:0,31,349	0/0:10,0:10:18.02:0,18,177	0/0:20,1:21:13.37:0,13,452	0/0:22,0:22:66.13:0,66,666	0/0:22,0:22:66.15:0,66,673	1/1:4,36:40:99:1306,105,0	0/0:19,0:19:33.07:0,33,337	0/0:36,0:36:87.12:0,87,875	0/0:25,0:25:60.13:0,60,612	0/0:22,0:22:63.12:0,63,634	0/0:23,0:23:66.15:0,66,673	0/0:22,0:22:66.13:0,66,665	0/0:25,0:25:69.14:0,69,697	0/0:15,0:15:42.09:0,42,429	1/1:3,14:17:39.12:491,39,0	0/0:11,0:11:30.07:0,30,306	1/1:4,17:21:51.16:641,51,0	1/1:2,25:27:69.18:847,69,0	1/1:1,13:14:36.12:453,36,0	0/0:26,0:26:66.15:0,66,673	0/0:34,0:34:90.20:0,90,918	0/0:20,0:20:54.12:0,54,550	0/0:29,0:29:81.18:0,81,826	0/1:7,16:23:37.68:512,0,38	1/1:5,22:27:63.20:792,63,0	1/1:0,11:11:21.07:264,21,0
chr10	41962888	.	ATGTGTG	A	1045.30	PASS	AC=18;AF=0.346;AN=52;BaseQRankSum=4.564;DP=681;FS=7.991;HRun=0;HaplotypeScore=154.4830;InbreedingCoeff=0.8141;MQ=65.92;MQ0=11;MQRankSum=-7.020;QD=5.71;ReadPosRankSum=-0.734;VQSLOD=1.7543;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:57:63.14:0,63,1388	0/0:13,0:12:18.05:0,18,421	./.	./.	0/0:23,0:26:30.07:0,30,664	1/1:13,4:18:9.03:163,9,0	1/1:9,1:14:6.02:84,6,0	0/0:45,0:44:8.02:0,8,83	1/1:15,4:20:9.65:183,10,0	0/0:25,0:27:24.04:0,24,322	0/0:11,0:12:8.66:0,9,110	1/1:21,5:26:12.04:223,12,0	1/1:14,0:14:5.75:72,6,0	1/1:21,3:23:9.03:181,9,0	0/0:15,0:19:17.74:0,18,242	0/0:16,0:20:21.07:0,21,608	0/0:16,0:22:17.08:0,17,252	0/0:10,0:15:14.12:0,14,168	0/0:21,0:21:5.05:0,5,60	0/0:25,0:25:30.09:0,30,589	0/0:36,0:34:42.10:0,42,824	1/1:14,5:20:9.03:138,9,0	1/1:17,2:19:6.02:121,6,0	1/1:19,7:25:3:60,3,0	0/0:18,0:28:29.68:0,30,391	0/0:31,0:30:30.98:0,31,580	0/0:21,0:21:30.97:0,31,666	0/0:10,0:13:9.03:0,9,115
chr10	41964427	.	GGTGTGT	G	742.50	PASS	AB=0.882;AC=9;AF=0.173;AN=52;BaseQRankSum=1.629;DP=594;FS=11.846;HRun=0;HaplotypeScore=135.4483;InbreedingCoeff=0.1021;MQ=57.23;MQ0=18;MQRankSum=-2.530;QD=4.10;ReadPosRankSum=0.351;VQSLOD=2.0083;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:29,15:44:12.52:89,0,13	0/0:5,0:8:10.26:0,10,105	./.	./.	0/0:27,0:28:20.25:0,20,517	0/0:24,0:24:5.15:0,5,15	0/0:18,0:19:14.39:0,14,100	0/0:26,0:24:8.80:0,9,57	0/0:5,0:7:0.30:0,0,4	0/0:28,0:26:31.24:0,31,533	0/0:11,0:11:4.24:0,4,47	0/0:21,0:21:13.52:0,14,338	0/1:15,0:16:8.99:45,0,9	0/1:18,0:19:3.74:4,0,190	0/0:19,0:22:18.53:0,19,468	1/1:15,11:26:4.07:288,4,0	0/0:27,0:28:24.80:0,25,371	0/0:15,0:14:18.05:0,18,313	0/0:16,0:16:8.93:0,9,70	0/1:15,0:17:11.40:119,0,11	0/0:12,0:12:0.47:0,0,1	0/0:18,0:19:8.81:0,9,43	0/0:19,0:20:16.44:0,16,201	0/0:28,0:29:26.68:0,27,400	0/0:24,0:23:18.06:0,18,484	0/1:22,0:20:31.09:65,0,31	0/1:19,0:23:2.57:221,0,3	0/1:9,0:10:17.74:40,0,18
chr10	41964476	.	ATG	A	4134.75	PASS	AB=1.000;AC=39;AF=0.722;AN=54;BaseQRankSum=-1.936;DP=598;FS=8.410;HRun=0;HaplotypeScore=99.0688;InbreedingCoeff=0.6721;MQ=55.02;MQ0=19;MQRankSum=1.371;QD=10.80;ReadPosRankSum=1.785;VQSLOD=2.8427;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:47:61.06:0,61,844	0/0:7,0:7:14.52:0,15,149	0/0:39,0:11:33.11:0,33,487	0/0:41,0:19:47.73:0,48,587	0/0:27,0:27:51.61:0,52,767	1/1:9,18:26:2.29:36,2,0	1/1:20,1:20:33.10:411,33,0	1/1:7,17:21:48.15:599,48,0	1/1:5,9:14:5.58:63,6,0	1/1:22,0:21:27.90:295,28,0	1/1:13,0:13:12.02:140,12,0	1/1:9,11:20:2.99:39,3,0	1/1:7,13:20:8.97:82,9,0	1/1:4,12:16:0.07:86,0,0	0/0:18,0:18:6.71:0,7,75	0/0:18,1:19:10.29:0,10,311	1/1:21,2:23:5.44:449,5,0	1/1:12,1:12:17.97:209,18,0	1/1:6,7:12:17.73:229,18,0	1/1:9,8:17:9.02:96,9,0	./.	1/1:11,15:26:2.91:25,3,0	1/1:5,9:14:8.80:113,9,0	1/1:8,21:27:10.57:116,11,0	0/1:25,0:24:32.61:344,0,33	1/1:4,10:13:27.06:324,27,0	1/1:6,15:21:12.04:144,12,0	1/1:10,1:11:27.09:337,27,0
chr10	41964478	.	G	GTGTGTA	1739.99	PASS	AB=0.964;AC=20;AF=0.370;AN=54;BaseQRankSum=-0.695;DP=588;FS=6.297;HRun=0;HaplotypeScore=139.6367;InbreedingCoeff=0.1803;MQ=55.45;MQ0=17;MQRankSum=1.297;QD=6.35;ReadPosRankSum=1.106;VQSLOD=2.0387;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:46:60.67:0,61,1170	0/0:7,0:7:15.05:0,15,319	0/0:39,0:11:33.11:0,33,662	0/0:41,0:20:51.06:0,51,714	0/0:28,0:28:52.20:0,52,896	0/1:26,0:25:4.52:17,0,5	0/1:20,0:19:2.40:135,0,2	1/1:22,0:20:11.95:382,12,0	0/0:13,0:13:5.90:0,6,62	1/1:21,0:20:0.70:191,1,0	1/1:13,0:13:11.64:92,12,0	0/0:20,0:20:12:0,12,113	0/1:19,0:19:1.11:1,0,22	0/0:16,0:16:10.57:0,11,102	0/1:8,9:18:5.42:325,0,5	0/0:21,0:21:29.26:0,29,698	0/1:23,0:23:99:124,0,119	0/1:12,0:12:26.23:81,0,26	1/1:14,0:13:7.68:70,8,0	0/1:16,0:16:10.31:10,0,42	./.	0/0:25,0:25:2.96:0,3,24	0/0:12,0:12:8.93:0,9,99	0/0:27,0:26:1.62:0,2,119	0/1:25,0:24:23:197,0,23	1/1:13,0:12:0.32:173,0,0	0/1:21,0:21:9.48:9,0,65	0/1:11,0:11:0.30:91,0,0
chr10	41965371	.	CCAGGCTGGTTCCA	C	13673.86	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=16.480;DP=681;FS=108.656;HRun=0;HaplotypeScore=247.7356;InbreedingCoeff=0.9798;MQ=82.54;MQ0=0;MQRankSum=-16.432;QD=75.97;ReadPosRankSum=4.693;VQSLOD=1.8941;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,129,7624	0/0:7,0:7:21.07:0,21,1242	0/0:20,0:20:60.16:0,60,3139	0/0:23,0:23:60.08:0,60,2614	0/0:27,0:27:81.28:0,81,4974	1/1:0,10:10:21.07:829,21,0	1/1:0,29:29:66.23:2423,66,0	0/0:31,0:31:81:0,81,4626	1/1:0,19:19:42.14:1667,42,0	0/0:38,0:38:99:0,108,6374	0/0:17,0:17:48.15:0,48,2833	1/1:0,23:23:39.13:1557,39,0	1/1:1,22:23:45.15:1730,45,0	1/1:1,23:24:60.21:2386,60,0	0/0:46,0:46:99:0,135,8485	0/0:43,0:43:99:0,120,7522	0/0:33,0:33:99:0,99,6173	0/0:15,0:15:45.15:0,45,2720	0/0:17,0:17:45.13:0,45,2626	0/0:22,0:22:66.23:0,66,4042	0/0:37,0:37:99:0,111,6389	1/1:0,25:25:45.15:1680,45,0	1/1:0,9:9:18.06:684,18,0	1/1:1,17:18:17.66:718,18,0	0/0:28,0:28:84.27:0,84,5192	0/0:26,0:26:78.22:0,78,4390	0/0:23,0:23:60.21:0,60,3919	0/0:2,0:2:6.02:0,6,374
chr10	41965718	.	T	TG	19474.79	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-13.805;DP=732;FS=3.712;HRun=5;HaplotypeScore=67.7524;InbreedingCoeff=0.9957;MQ=92.81;MQ0=0;MQRankSum=-6.912;QD=33.35;ReadPosRankSum=3.222;VQSLOD=5.4390;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:69.13:0,69,729	0/0:8,0:8:21.03:0,21,215	0/0:28,0:28:72.08:0,72,735	0/0:32,0:32:62.81:0,63,621	0/0:24,0:24:69.13:0,69,717	1/1:0,32:32:90.29:1183,90,0	1/1:1,26:27:78.25:1026,78,0	1/1:4,29:34:90.26:1147,90,0	1/1:2,29:31:78.25:1020,78,0	1/1:4,20:24:60.20:788,60,0	1/1:2,20:22:60.19:780,60,0	1/1:1,21:22:54.18:710,54,0	1/1:3,26:29:75.24:977,75,0	1/1:1,40:41:99:1303,99,0	1/1:1,29:30:78.25:1025,78,0	0/0:29,0:29:84.21:0,84,903	1/1:3,21:24:57.15:750,57,0	1/1:4,9:13:27.09:353,27,0	1/1:4,22:26:66.21:861,66,0	1/1:3,30:33:84.15:1061,84,0	1/1:5,18:23:45.12:575,45,0	1/1:0,30:30:81.26:1054,81,0	1/1:4,21:25:57.03:730,57,0	1/1:4,32:36:84.27:1105,84,0	1/1:1,16:17:45.15:592,45,0	1/1:0,37:37:99:1367,108,0	1/1:1,22:23:66.21:868,66,0	1/1:0,5:5:15.05:197,15,0
chr10	41968193	.	CAG	C	340.68	PASS	AB=0.960;AC=14;AF=0.250;AN=56;BaseQRankSum=4.515;DP=702;FS=37.540;HRun=0;HaplotypeScore=142.3806;InbreedingCoeff=-0.3285;MQ=55.91;MQ0=17;MQRankSum=2.896;QD=1.01;ReadPosRankSum=0.866;VQSLOD=1.0968;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:34:31.10:0,31,385	0/0:6,0:6:17.99:0,18,181	0/0:26,0:12:27.57:0,28,201	0/0:31,0:13:6.92:0,7,127	0/1:4,20:24:26.56:37,0,27	0/1:27,0:27:31.31:31,0,195	0/1:27,0:27:30.03:30,0,182	0/0:61,0:56:65.93:0,66,802	0/1:18,0:18:43.56:44,0,109	0/0:17,0:17:35.75:0,36,583	0/0:4,0:3:8.70:0,9,117	0/1:30,0:30:99:108,0,180	0/1:20,1:21:43.71:44,0,113	0/1:27,1:25:23.53:24,0,256	0/0:26,0:26:50.09:0,50,823	0/0:32,0:32:43.02:0,43,755	0/0:33,0:33:18.34:0,18,332	0/0:17,0:16:34.10:0,34,434	0/1:26,0:26:12.26:12,0,337	0/1:21,0:21:76.24:76,0,76	0/1:37,1:36:19.28:19,0,192	0/0:16,0:16:0.72:0,1,207	0/1:14,0:11:1.95:2,0,118	0/1:31,0:31:11.83:12,0,336	0/0:25,0:25:39.89:0,40,714	0/0:36,0:35:8.44:0,8,489	0/1:28,0:26:14.14:46,0,14	0/1:4,0:4:3:3,0,29
chr10	41968195	.	GAC	G	3674.03	PASS	AB=0.820;AC=31;AF=0.596;AN=52;BaseQRankSum=-5.177;DP=688;FS=0.519;HRun=0;HaplotypeScore=130.6719;InbreedingCoeff=0.0067;MQ=55.97;MQ0=16;MQRankSum=-0.475;QD=6.68;ReadPosRankSum=0.038;VQSLOD=3.2398;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:37:19.17:0,19,107	0/1:7,0:7:18.40:18,0,40	./.	./.	0/1:25,0:25:9.62:10,0,96	1/1:15,11:28:26.91:282,27,0	1/1:12,13:27:28.93:270,29,0	1/1:56,3:55:18.78:182,19,0	0/1:9,8:17:2.12:210,0,2	0/1:14,0:17:0.40:0,0,239	0/0:4,0:3:9.02:0,9,90	1/1:14,15:30:5.34:458,5,0	1/1:7,12:20:32.71:328,33,0	0/1:13,12:23:24.65:180,0,25	0/1:23,3:26:58.41:58,0,297	0/0:21,1:32:8.86:0,9,387	1/1:25,8:33:25.58:234,26,0	0/0:16,0:15:9.57:0,10,178	0/1:20,4:24:8.63:154,0,9	0/1:17,4:21:24.30:149,0,24	0/1:19,17:34:4.37:149,0,4	0/1:10,6:16:24.81:139,0,25	1/1:9,5:11:8.91:100,9,0	0/1:17,10:30:7.17:284,0,7	0/1:24,2:26:75.23:75,0,298	0/1:28,7:34:30.29:207,0,30	1/1:26,2:26:18.14:146,18,0	1/1:3,1:4:5.05:40,5,0
chr10	41968199	.	C	CAG	2809.90	PASS	AB=0.962;AC=19;AF=0.339;AN=56;BaseQRankSum=-0.018;DP=673;FS=11.292;HRun=0;HaplotypeScore=131.9561;InbreedingCoeff=-0.3270;MQ=54.26;MQ0=16;MQRankSum=-4.481;QD=5.98;ReadPosRankSum=-2.345;VQSLOD=2.3852;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:40,0:39:71.12:71,0,334	0/0:4,0:4:8.96:0,9,89	0/0:19,0:7:10.79:0,11,106	0/0:25,0:9:7.27:0,7,85	0/0:25,0:25:14.98:0,15,154	0/0:27,0:27:52.23:0,52,350	0/1:27,1:27:47.88:48,0,277	0/1:61,0:56:81.34:541,0,81	0/1:16,1:17:17.57:18,0,167	0/1:17,0:17:27.86:90,0,28	0/0:4,0:3:7.79:0,8,31	0/0:30,0:30:51.07:0,51,480	0/1:17,0:17:6.22:6,0,222	0/0:26,0:23:46.88:0,47,356	0/1:24,0:24:33.01:239,0,33	0/1:30,0:30:52.09:52,0,473	1/1:28,5:33:57:511,57,0	0/1:16,0:14:76.93:111,0,77	0/1:19,0:19:21.24:285,0,21	0/1:20,0:21:64.78:72,0,65	0/1:35,2:35:21.88:182,0,22	0/1:15,1:16:17.18:17,0,209	0/0:13,0:10:23.17:0,23,154	0/0:29,1:30:21.27:0,21,472	0/1:27,0:27:91.47:166,0,91	0/1:32,1:33:81.47:342,0,81	0/1:12,17:27:15.70:171,0,16	0/1:5,0:5:3.13:51,0,3
chr10	41968423	.	G	GA	13340.07	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-13.882;DP=679;FS=12.492;HRun=8;HaplotypeScore=60.5977;InbreedingCoeff=0.9950;MQ=63.69;MQ0=5;MQRankSum=-0.634;QD=26.84;ReadPosRankSum=-0.835;VQSLOD=4.3722;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,138,1261	0/0:15,0:15:42.02:0,42,384	0/0:29,0:12:27.66:0,28,214	0/0:27,0:13:14.48:0,14,256	0/0:33,2:35:55.42:0,55,761	1/1:1,20:21:26.73:561,27,0	1/1:1,17:18:36.11:415,36,0	1/1:5,25:30:77.49:842,77,0	1/1:1,10:11:24.07:277,24,0	1/1:2,20:22:60.13:677,60,0	1/1:2,17:19:48.14:548,48,0	1/1:2,20:21:51.15:589,51,0	1/1:5,21:26:60.18:693,60,0	1/1:0,17:17:36.11:415,36,0	1/1:4,16:21:44.82:514,45,0	0/0:25,0:25:69.02:0,69,626	1/1:8,28:36:75.22:865,75,0	1/1:2,24:26:66.20:762,66,0	1/1:2,25:26:66.56:743,67,0	1/1:2,16:18:48.14:552,48,0	1/1:4,25:29:59.89:692,60,0	1/1:2,19:21:57.13:638,57,0	1/1:3,15:18:39.12:450,39,0	1/1:3,33:36:90.27:1039,90,0	1/1:3,25:28:54.15:614,54,0	1/1:4,23:26:69.21:796,69,0	1/1:0,9:9:24.07:277,24,0	1/1:2,13:15:33.10:381,33,0
chr10	41969128	.	CA	C	12071.77	PASS	AB=1.000;AC=45;AF=0.804;AN=56;BaseQRankSum=10.888;DP=701;FS=2.094;HRun=9;HaplotypeScore=94.0350;InbreedingCoeff=0.9305;MQ=87.93;MQ0=0;MQRankSum=-2.019;QD=21.83;ReadPosRankSum=2.795;VQSLOD=5.4007;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:39,3:42:40.95:0,41,1223	0/0:13,0:13:33.10:0,33,381	0/1:24,0:24:1.72:2,0,357	0/0:28,0:27:26.15:0,26,271	0/0:44,0:44:99:0,108,1224	1/1:3,16:19:45.02:412,45,0	1/1:0,23:23:60.03:549,60,0	1/1:4,23:27:69.04:631,69,0	1/1:4,18:22:48:439,48,0	1/1:6,27:33:78.02:710,78,0	1/1:1,22:23:63.03:577,63,0	1/1:4,11:15:33.01:302,33,0	1/1:2,23:25:69.04:631,69,0	1/1:3,25:28:50.54:634,51,0	1/1:5,23:28:69.03:632,69,0	0/0:20,0:21:56.99:0,57,628	1/1:0,18:18:51.03:467,51,0	1/1:6,13:19:36.01:329,36,0	1/1:1,14:15:42.01:380,42,0	1/1:7,26:33:72.03:659,72,0	1/1:1,24:25:69.04:631,69,0	1/1:3,28:31:75.02:686,75,0	1/1:5,29:34:78.02:714,78,0	1/1:1,34:35:90.05:824,90,0	1/1:3,13:16:33.02:302,33,0	1/1:1,25:26:75.02:681,75,0	1/1:1,27:28:81.04:741,81,0	1/1:1,5:6:15.01:137,15,0
chr10	41969455	.	ACTTT	A	3086.96	PASS	AB=0.980;AC=18;AF=0.321;AN=56;BaseQRankSum=10.763;DP=666;FS=12.860;HRun=0;HaplotypeScore=134.4721;InbreedingCoeff=0.9028;MQ=63.74;MQ0=5;MQRankSum=0.813;QD=13.54;ReadPosRankSum=-0.407;VQSLOD=2.5667;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:77.85:0,78,715	0/0:16,0:16:44.62:0,45,378	0/0:22,0:16:13.39:0,13,217	0/0:31,0:14:18.59:0,19,188	0/0:21,0:23:54.83:0,55,457	1/1:11,0:11:20.96:170,21,0	1/1:24,0:24:38.90:502,39,0	0/0:34,0:34:74.79:0,75,817	1/1:20,1:20:43.77:356,44,0	0/0:28,0:28:77.61:0,78,720	0/0:14,0:14:36.02:0,36,327	1/1:23,1:24:57.72:644,58,0	1/1:21,1:22:42.89:348,43,0	1/1:20,1:21:38.02:329,38,0	0/0:29,0:29:72:0,72,786	0/0:28,0:28:51.80:0,52,533	0/0:25,0:25:59.17:0,59,561	0/1:23,0:24:2.94:3,0,569	0/0:21,0:21:48.75:0,49,451	0/0:17,0:16:18.41:0,18,258	0/0:29,0:29:62.87:0,63,532	1/1:21,0:21:53.02:411,53,0	0/1:22,0:21:0.06:0,0,0	1/1:38,0:38:63.25:526,63,0	0/0:34,0:34:83.44:0,83,752	0/0:20,0:20:51.01:0,51,463	0/0:26,0:24:54.55:0,55,542	0/0:11,0:9:9.91:0,10,123
chr10	41969456	.	CTT	C	3590.40	PASS	AB=0.756;AC=18;AF=0.321;AN=56;BaseQRankSum=10.340;DP=661;FS=15.415;HRun=3;HaplotypeScore=111.1570;InbreedingCoeff=0.9076;MQ=62.30;MQ0=5;MQRankSum=1.380;QD=15.75;ReadPosRankSum=-0.787;VQSLOD=-0.1873;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:67.24:0,67,609	0/0:16,0:16:44.62:0,45,378	0/0:21,0:15:13.84:0,14,219	0/0:30,0:13:18.64:0,19,188	0/0:23,0:23:54.83:0,55,457	1/1:11,0:11:20.96:170,21,0	1/1:24,0:24:60.38:533,60,0	0/0:33,0:33:74.77:0,75,817	1/1:18,3:20:53.69:476,54,0	0/0:27,1:28:77.61:0,78,695	0/0:14,0:14:36.02:0,36,329	1/1:25,0:25:65.48:567,65,0	1/1:22,0:22:47.68:421,48,0	1/1:18,3:21:47.57:400,48,0	0/0:28,1:29:72.07:0,72,718	0/0:29,0:29:13.47:0,13,497	0/0:25,0:25:59.16:0,59,515	0/1:23,0:23:2.84:3,0,421	0/0:21,0:21:56.07:0,56,466	0/0:17,0:16:31.19:0,31,272	0/0:29,0:29:62.87:0,63,532	1/1:21,0:21:53.32:466,53,0	0/1:1,21:21:0:0,0,0	1/1:36,2:38:65.83:554,66,0	0/0:31,0:31:83.44:0,83,752	0/0:19,0:19:50.97:0,51,460	0/0:25,0:23:67.73:0,68,569	0/0:11,0:9:17.22:0,17,137
chr10	41969458	.	TTCTCTCTCTCTCTCTC	T	734.63	PASS	AB=1.000;AC=10;AF=0.200;AN=50;BaseQRankSum=0.373;DP=675;FS=0.000;HRun=0;HaplotypeScore=278.8417;InbreedingCoeff=0.5151;MQ=60.76;MQ0=8;MQRankSum=-1.013;QD=6.23;ReadPosRankSum=0.799;VQSLOD=2.2045;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:34:27.09:0,27,1782	0/0:17,0:17:8.68:0,9,265	./.	0/0:29,0:12:0:0,0,0	0/0:22,0:22:21.05:0,21,461	./.	0/0:25,0:25:39.12:0,39,1485	0/0:34,0:34:0:0,0,0	0/0:21,0:20:21.06:0,21,944	0/0:28,0:28:6.02:0,6,338	0/0:14,0:14:9.02:0,9,290	0/0:26,0:26:30.57:0,31,1361	0/0:22,0:22:24.05:0,24,986	0/0:21,0:21:25:0,25,985	0/0:31,0:30:21.53:0,22,825	0/0:32,0:32:18.04:0,18,834	0/0:28,0:28:16.28:0,16,694	0/0:23,0:23:27.09:0,27,1526	1/1:15,5:20:7.43:174,7,0	1/1:15,0:15:3.02:176,3,0	0/1:27,0:27:14.98:15,0,25	0/0:24,0:24:15.02:0,15,598	0/0:25,0:24:2.94:0,3,179	0/0:37,0:37:36.11:0,36,1313	./.	0/1:19,0:19:39.92:40,0,139	1/1:22,1:23:11.86:335,12,0	1/1:8,3:9:3.01:131,3,0
chr10	41970203	.	CT	C	701.30	PASS	AB=0.747;AC=4;AF=0.071;AN=56;BaseQRankSum=-4.772;DP=573;FS=4.582;HRun=12;HaplotypeScore=96.9071;InbreedingCoeff=0.3865;MQ=63.06;MQ0=4;MQRankSum=0.343;QD=8.55;ReadPosRankSum=1.230;VQSLOD=3.0145;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,34:43:57.25:608,57,0	0/0:6,0:6:6.01:0,6,61	0/0:10,0:8:15.01:0,15,139	0/0:13,0:13:5.02:0,5,61	0/0:23,0:23:53.98:0,54,532	0/0:4,0:21:40.56:0,41,229	0/0:3,0:19:40.41:0,40,218	0/0:36,3:38:11.42:0,11,646	0/0:6,0:10:5.68:0,6,29	0/0:6,0:17:40.91:0,41,259	0/0:8,0:18:22.97:0,23,124	0/0:4,0:16:16.80:0,17,82	0/0:8,0:19:18.88:0,19,94	0/0:4,0:18:25.69:0,26,134	0/0:5,0:16:25.54:0,26,150	0/1:4,13:18:9.11:197,0,9	0/0:33,0:34:71.95:0,72,706	0/0:7,1:21:5.48:0,5,125	0/0:16,0:14:24.05:0,24,243	0/0:22,0:22:51.01:0,51,489	0/0:21,0:23:38.25:0,38,414	0/0:9,0:28:42.61:0,43,215	0/0:9,0:18:15.42:0,15,106	0/0:4,0:27:41.32:0,41,205	0/0:2,0:15:28.41:0,28,143	0/1:17,2:21:7.28:7,0,209	0/0:19,1:19:15.88:0,16,337	0/0:18,1:19:27.78:0,28,433
chr10	41972480	.	CT	C	5951.12	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=9.696;DP=516;FS=3.665;HRun=2;HaplotypeScore=124.8023;InbreedingCoeff=0.9970;MQ=73.70;MQ0=1;MQRankSum=-5.751;QD=34.80;ReadPosRankSum=1.947;VQSLOD=4.4933;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:51.17:0,51,764	0/0:7,0:7:21.07:0,21,315	0/0:16,0:11:26.83:0,27,365	0/0:34,1:28:19.11:0,19,654	0/0:30,0:30:87.29:0,87,1295	1/1:0,31:31:93.30:1206,93,0	1/1:0,25:25:69.22:895,69,0	0/0:24,0:24:66.22:0,66,989	1/1:0,14:14:39.13:506,39,0	0/0:17,0:17:48.16:0,48,703	0/0:21,0:21:60.19:0,60,863	1/1:0,13:13:36.12:467,36,0	1/1:0,18:18:48.16:622,48,0	1/1:0,20:20:54.18:700,54,0	0/0:19,0:19:51.16:0,51,744	0/0:19,0:19:57.19:0,57,852	0/0:19,0:19:42.13:0,42,608	0/0:11,0:11:24.05:0,24,337	0/0:13,0:13:36.12:0,36,538	0/0:19,0:19:51.17:0,51,763	0/0:9,0:9:27.05:0,27,377	1/1:0,22:22:57.19:739,57,0	1/1:0,15:15:42.14:545,42,0	1/1:0,13:13:21.07:272,21,0	0/0:22,0:21:54.17:0,54,789	0/0:16,0:16:48.16:0,48,719	0/0:18,0:18:54.18:0,54,807	0/0:13,0:13:36.12:0,36,540
chr10	41972501	.	T	TTCTC	2226.15	PASS	AB=0.938;AC=17;AF=0.315;AN=54;BaseQRankSum=-7.259;DP=541;FS=19.194;HRun=0;HaplotypeScore=183.0511;InbreedingCoeff=0.6969;MQ=63.16;MQ0=16;MQRankSum=1.838;QD=11.24;ReadPosRankSum=-4.542;VQSLOD=1.0558;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:17:2.73:0,3,34	0/0:4,0:4:3.01:0,3,45	1/1:27,0:16:2.03:5,2,0	./.	0/0:20,0:26:18.40:0,18,154	0/0:27,0:27:27.02:0,27,247	0/0:20,0:20:9.01:0,9,84	1/1:32,0:30:25.35:187,25,0	0/0:12,0:12:12.01:0,12,111	0/0:17,0:17:11.20:0,11,76	0/0:17,0:17:18.48:0,18,162	0/0:15,0:15:11.71:0,12,87	0/0:14,0:14:6.01:0,6,56	0/0:21,0:20:23.06:0,23,201	0/0:18,0:18:18.49:0,18,168	1/1:23,0:23:18.06:359,18,0	0/0:17,0:17:21.06:0,21,297	0/0:10,0:9:9.01:0,9,84	1/1:22,0:21:9.03:148,9,0	1/1:27,0:27:23.81:412,24,0	1/1:6,0:6:3.01:63,3,0	0/0:24,0:24:6.28:0,6,79	0/0:13,0:13:18.02:0,18,167	0/0:11,0:10:3:0,3,28	0/0:24,0:23:18.02:0,18,167	0/1:14,1:15:10.08:300,0,10	1/1:24,0:24:33.07:574,33,0	1/1:16,5:19:18.06:359,18,0
chr10	41972504	.	TCTCTCTCTC	T	2368.82	PASS	AB=0.785;AC=9;AF=0.161;AN=56;BaseQRankSum=10.390;DP=552;FS=13.757;HRun=0;HaplotypeScore=219.6372;InbreedingCoeff=-0.1952;MQ=61.60;MQ0=18;MQRankSum=-9.353;QD=15.69;ReadPosRankSum=3.997;VQSLOD=0.9094;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:20:48.16:0,48,1219	0/0:5,0:5:15.05:0,15,429	0/0:26,0:15:41.72:0,42,485	0/0:34,0:18:41.56:0,42,478	0/0:28,0:28:78.26:0,78,1420	0/1:18,9:27:99:567,0,110	0/1:15,4:19:99:207,0,100	0/0:32,0:30:83.68:0,84,1946	0/1:7,4:11:79.67:242,0,80	0/0:19,0:19:54.18:0,54,1197	0/0:18,0:17:48.16:0,48,1094	0/1:12,2:15:85.14:207,0,85	0/1:11,2:13:91.23:112,0,91	0/1:12,7:19:78.71:471,0,79	0/0:18,0:18:41.93:0,42,625	0/0:26,0:25:48.43:0,48,1503	0/0:17,0:17:45.15:0,45,1519	0/0:11,0:10:21.07:0,21,444	0/0:22,0:21:62.67:0,63,1303	0/0:28,0:28:54.18:0,54,1636	0/0:6,0:6:9.03:0,9,213	0/1:17,5:22:99:263,0,116	0/1:7,6:13:54.43:370,0,54	0/1:9,2:10:37.02:69,0,37	0/0:27,0:25:57.19:0,57,1143	0/0:16,0:16:46.97:0,47,1553	0/0:25,0:25:63.21:0,63,1873	0/0:22,0:19:48.16:0,48,1324
chr10	41972539	.	CTCTCT	C	1887.22	PASS	AB=0.995;AC=19;AF=0.339;AN=56;BaseQRankSum=5.762;DP=443;FS=48.659;HRun=0;HaplotypeScore=165.9282;InbreedingCoeff=0.1012;MQ=63.78;MQ0=22;MQRankSum=-4.381;QD=8.35;ReadPosRankSum=5.139;VQSLOD=0.8337;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:30.55:0,31,371	0/0:5,0:5:15.05:0,15,244	0/0:18,0:10:27.06:0,27,308	0/0:21,0:14:21.24:0,21,238	0/1:22,0:22:99:145,0,237	0/1:14,0:14:97.62:180,0,98	0/1:14,0:14:48.84:49,0,173	0/0:22,0:22:58.96:0,59,861	0/1:10,0:10:70.68:71,0,112	1/1:21,0:18:37.49:346,37,0	0/1:16,1:13:55.72:108,0,56	0/1:10,0:10:73.07:73,0,89	0/1:8,0:8:27.80:28,0,132	0/1:18,0:17:99:146,0,120	1/1:15,6:19:26.86:475,27,0	0/0:20,0:19:34.64:0,35,498	0/0:16,0:16:30.10:0,30,742	1/1:10,0:8:13.36:117,13,0	0/0:12,0:12:33.05:0,33,505	0/0:24,0:24:53.99:0,54,883	0/0:3,0:3:3.01:0,3,55	0/1:10,0:10:66.93:73,0,67	0/1:17,0:16:99:110,0,116	0/1:10,0:9:11.27:11,0,55	1/1:24,0:21:23.79:139,24,0	0/0:14,0:14:42.13:0,42,803	0/0:21,0:21:47.92:0,48,854	0/0:21,0:18:42.14:0,42,842
chr10	41972541	.	CTCT	C	1844.91	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=4.315;DP=438;FS=53.503;HRun=0;HaplotypeScore=154.8960;InbreedingCoeff=0.2756;MQ=64.41;MQ0=19;MQRankSum=-5.134;QD=8.54;ReadPosRankSum=4.032;VQSLOD=1.3272;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:30.09:0,30,238	0/0:5,0:5:15.05:0,15,196	0/0:19,0:11:30.07:0,30,353	0/0:21,0:14:20.70:0,21,238	0/1:22,0:22:53.47:53,0,254	0/1:14,0:14:58.09:58,0,101	0/1:14,0:14:7.23:7,0,187	0/0:21,0:21:56.85:0,57,654	0/1:11,0:11:14.64:15,0,117	1/1:18,2:17:51.09:597,51,0	1/1:15,2:13:24.03:299,24,0	0/1:10,0:10:18.46:18,0,90	0/1:8,0:8:0.73:1,0,132	0/1:18,0:17:37.63:38,0,123	1/1:21,0:19:30.05:321,30,0	0/0:19,0:18:34.10:0,34,309	0/0:16,0:16:29.18:0,29,492	1/1:6,5:9:15.04:196,15,0	0/0:12,0:12:32.97:0,33,386	0/0:23,0:23:51.45:0,51,643	0/0:4,0:4:3:0,3,28	0/1:10,0:10:17.21:17,0,69	0/1:17,0:16:28.80:29,0,118	0/0:9,0:9:2.35:0,2,65	1/1:12,11:20:24.03:379,24,0	0/0:13,0:13:39.11:0,39,542	0/0:22,0:22:47.75:0,48,583	0/0:18,0:18:42.14:0,42,667
chr10	41972543	.	CT	C	863.86	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-0.972;DP=450;FS=24.870;HRun=6;HaplotypeScore=159.2562;InbreedingCoeff=0.9327;MQ=63.82;MQ0=19;MQRankSum=-0.146;QD=9.93;ReadPosRankSum=4.898;VQSLOD=0.3810;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:26.27:0,26,129	0/0:5,0:5:12.04:0,12,149	0/0:19,0:11:30.07:0,30,334	0/0:21,0:14:21.04:0,21,238	0/0:20,0:20:40.08:0,40,368	0/0:16,0:16:26.18:0,26,168	0/0:14,0:14:20.37:0,20,233	0/0:23,0:23:48.02:0,48,531	0/0:12,0:12:21.47:0,21,158	1/1:9,11:17:38.96:387,39,0	1/1:9,6:11:14.86:117,15,0	0/0:12,0:11:21.92:0,22,145	0/0:12,0:12:26.39:0,26,219	0/0:18,0:17:33.27:0,33,197	1/1:10,10:18:26.80:219,27,0	0/0:20,0:19:27.61:0,28,120	0/0:16,0:16:23.56:0,24,279	1/1:9,1:8:14.75:116,15,0	0/0:13,0:13:27.78:0,28,294	0/0:23,0:23:51.81:0,52,488	0/0:4,0:4:0.89:0,1,2	0/0:13,0:13:25.92:0,26,167	0/0:20,0:19:24.90:0,25,171	0/0:11,0:10:11.43:0,11,80	1/1:16,6:19:23.55:195,24,0	0/0:13,0:13:29.73:0,30,334	0/0:22,0:22:37.09:0,37,341	0/0:18,0:18:42.09:0,42,467
chr10	41972576	.	CACAT	C	2521.58	PASS	AB=0.982;AC=26;AF=0.481;AN=54;BaseQRankSum=2.972;DP=440;FS=32.421;HRun=0;HaplotypeScore=163.2651;InbreedingCoeff=-0.2035;MQ=53.80;MQ0=17;MQRankSum=-2.744;QD=7.98;ReadPosRankSum=6.086;VQSLOD=1.4183;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:48.13:0,48,1032	0/0:5,0:5:15.05:0,15,404	0/0:28,0:13:36.05:0,36,597	0/0:24,0:12:17.28:0,17,523	0/0:23,0:23:35.91:0,36,620	0/1:14,1:15:30.22:40,0,30	0/1:13,0:13:49.44:49,0,72	0/1:14,0:14:99:148,0,132	0/1:10,1:11:26.95:112,0,27	1/1:17,0:16:38.16:386,38,0	0/1:18,0:14:24.95:89,0,25	0/1:10,0:9:4.96:21,0,5	1/1:16,2:18:10.09:331,10,0	1/1:13,0:13:3:26,3,0	0/1:23,1:22:48.95:79,0,49	0/0:14,0:14:31.56:0,32,637	0/1:14,0:14:28.04:103,0,28	0/1:10,0:10:34.91:71,0,35	0/1:7,0:6:37.97:69,0,38	0/1:22,1:21:7.54:268,0,8	./.	0/1:16,0:16:5.99:113,0,6	0/1:22,0:22:16:40,0,16	1/1:7,2:9:2.69:27,3,0	0/1:17,1:16:28.22:102,0,28	0/1:12,0:12:31.98:165,0,32	0/1:15,0:14:31.35:31,0,75	1/1:15,2:16:15.09:419,15,0
chr10	41972580	.	TACAC	T	5027.91	PASS	AB=0.750;AC=41;AF=0.759;AN=54;BaseQRankSum=-0.600;DP=451;FS=20.563;HRun=0;HaplotypeScore=157.4262;InbreedingCoeff=0.7033;MQ=51.61;MQ0=19;MQRankSum=-3.106;QD=15.66;ReadPosRankSum=3.672;VQSLOD=3.0114;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:42.14:0,42,951	0/0:5,0:5:15.05:0,15,375	0/0:26,1:12:17.80:0,18,375	0/0:23,0:11:18.95:0,19,446	0/0:25,0:25:20.66:0,21,460	1/1:8,7:15:6.02:102,6,0	1/1:8,5:13:5.99:102,6,0	1/1:6,8:14:21.03:326,21,0	1/1:8,4:12:11.97:171,12,0	0/1:14,7:20:0.32:632,0,0	1/1:15,5:16:12.98:206,13,0	1/1:3,7:9:3.01:51,3,0	1/1:10,9:19:27.64:475,28,0	1/1:6,6:12:3.01:51,3,0	1/1:14,8:20:9.03:153,9,0	0/0:16,0:16:26.57:0,27,579	1/1:6,12:18:6.32:173,6,0	1/1:5,3:8:9.03:153,9,0	1/1:3,6:8:17.93:213,18,0	1/1:20,3:21:39.12:632,39,0	./.	1/1:11,6:17:15.05:256,15,0	1/1:10,10:20:6.02:91,6,0	1/1:5,4:9:2.70:51,3,0	1/1:12,4:15:12.04:205,12,0	1/1:9,2:12:25.32:388,25,0	1/1:5,9:13:2.09:50,2,0	1/1:15,2:16:33.11:546,33,0
chr10	41972594	.	C	CG	35.46	PASS	AB=0.934;AC=23;AF=0.426;AN=54;BaseQRankSum=1.529;DP=440;FS=6.746;HRun=0;HaplotypeScore=144.0376;InbreedingCoeff=0.5009;MQ=40.58;MQ0=28;MQRankSum=4.971;QD=0.18;ReadPosRankSum=6.605;VQSLOD=1.2809;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:41.94:0,42,582	0/0:5,0:5:15.05:0,15,210	0/0:20,0:6:17.89:0,18,224	0/0:19,0:7:18.95:0,19,254	0/0:23,0:23:20.92:0,21,267	1/1:14,0:13:1.63:3,2,0	1/1:12,0:11:0.05:10,0,0	0/0:14,0:13:13.13:0,13,91	0/0:9,0:9:4.01:0,4,37	0/0:21,4:24:36.08:0,36,415	1/1:17,2:17:3.07:6,3,0	1/1:13,0:12:0.69:1,1,0	0/0:19,0:18:14.52:0,15,73	1/1:12,0:12:0.89:2,1,0	0/1:19,2:19:0.47:1,0,0	0/0:14,0:14:26.80:0,27,377	0/0:17,0:17:13.31:0,13,115	1/1:9,0:7:1.59:30,2,0	0/0:12,0:11:24.80:0,25,274	1/1:26,0:24:15.25:88,15,0	./.	1/1:13,0:13:4.43:8,4,0	1/1:17,0:17:0.63:1,1,0	1/1:10,0:8:0.89:2,1,0	0/0:16,2:16:6.60:0,7,90	0/1:15,1:15:11.63:12,0,127	0/0:11,0:10:7.27:0,7,84	0/1:17,1:16:4.08:4,0,10
chr10	41972598	.	CGAGAGAGAGAGAGAGA	C	376.61	PASS	AB=0.905;AC=7;AF=0.167;AN=42;BaseQRankSum=4.943;DP=459;FS=32.997;HRun=0;HaplotypeScore=198.4078;InbreedingCoeff=0.3355;MQ=38.89;MQ0=30;MQRankSum=-2.996;QD=3.62;ReadPosRankSum=-0.629;VQSLOD=1.4139;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:5.96:0,6,45	0/0:6,0:6:4.83:0,5,67	./.	./.	0/1:15,9:25:0:0,0,0	./.	./.	0/0:21,0:20:13.76:0,14,113	0/0:8,0:8:2.96:0,3,19	0/1:26,0:25:5.27:5,0,547	0/0:19,0:17:3.09:0,3,98	./.	0/1:20,0:19:1.16:213,0,1	./.	0/0:23,0:21:4.41:0,4,26	1/1:14,0:13:6.26:156,6,0	0/0:17,0:17:9.03:0,9,262	0/0:10,0:7:3:0,3,25	0/0:15,0:14:11.53:0,12,503	0/0:29,0:27:18.91:0,19,382	./.	0/0:14,0:14:2.99:0,3,23	1/1:19,0:19:3.01:105,3,0	0/0:10,0:8:0.47:0,0,1	0/0:20,0:18:7.24:0,7,472	0/0:18,0:14:21.06:0,21,671	0/0:13,0:12:8.95:0,9,286	0/0:18,0:16:9.48:0,9,274
chr10	41972652	.	AGAGAGAGAGG	A	4530.65	PASS	AB=1.000;AC=41;AF=0.732;AN=56;BaseQRankSum=-2.990;DP=498;FS=1.626;HRun=0;HaplotypeScore=155.1981;InbreedingCoeff=0.2152;MQ=58.69;MQ0=33;MQRankSum=-0.881;QD=10.76;ReadPosRankSum=1.400;VQSLOD=3.9745;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:43.55:0,44,322	0/1:6,0:6:0.12:0,0,93	0/0:38,0:15:30.11:0,30,299	0/1:40,0:15:10.60:11,0,152	0/0:20,0:20:15:0,15,130	1/1:16,0:15:17.38:143,17,0	1/1:16,0:15:26.84:210,27,0	1/1:16,0:16:34.31:316,34,0	1/1:8,0:8:14.89:112,15,0	1/1:28,1:29:63.27:846,63,0	1/1:22,2:22:34.73:278,35,0	1/1:9,0:9:20.89:170,21,0	1/1:12,0:10:23.80:281,24,0	1/1:7,0:7:3:26,3,0	1/1:17,1:18:23.46:217,23,0	0/1:18,0:17:54.71:55,0,312	1/1:20,0:20:8.66:168,9,0	1/1:11,0:9:15.78:136,16,0	0/1:15,0:13:58.77:59,0,390	0/1:32,0:30:17.91:43,0,18	1/1:22,0:22:35.91:289,36,0	1/1:17,0:17:32.94:271,33,0	1/1:13,0:13:23.99:251,24,0	1/1:15,0:12:23.88:199,24,0	0/1:18,0:16:99:144,0,174	0/1:21,0:16:99:232,0,145	0/1:9,0:8:32:32,0,211	0/1:9,0:9:42.99:43,0,56
chr10	41972654	.	AGAGAGAGG	A	5022.35	PASS	AB=1.000;AC=42;AF=0.750;AN=56;BaseQRankSum=-3.573;DP=501;FS=0.000;HRun=0;HaplotypeScore=141.6258;InbreedingCoeff=0.2386;MQ=62.19;MQ0=32;MQRankSum=-0.197;QD=11.82;ReadPosRankSum=1.573;VQSLOD=3.7428;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:43.55:0,44,322	0/1:5,0:5:31.28:31,0,92	0/0:38,0:15:30.11:0,30,299	0/1:43,0:18:4.79:5,0,185	0/0:20,0:20:14.99:0,15,130	1/1:16,0:15:17.71:143,18,0	1/1:17,0:16:29.84:234,30,0	1/1:19,0:19:40.63:372,41,0	1/1:8,0:8:14.89:112,15,0	1/1:7,21:28:69.80:881,70,0	1/1:18,3:19:34.59:277,35,0	1/1:10,0:10:20.89:170,21,0	1/1:13,0:11:26.80:278,27,0	1/1:7,0:7:3:26,3,0	1/1:14,2:16:23.47:260,23,0	0/1:19,0:18:23.84:24,0,336	1/1:21,0:21:29.62:250,30,0	1/1:11,0:9:15.98:137,16,0	0/1:15,0:13:86.90:87,0,184	1/1:9,23:30:8.73:55,9,0	1/1:23,0:23:38.90:314,39,0	1/1:17,0:17:35.94:297,36,0	1/1:13,0:13:23.99:237,24,0	1/1:14,0:12:23.87:199,24,0	0/1:18,0:16:61.34:186,0,61	0/1:21,0:16:37.71:264,0,38	0/1:10,0:9:76.96:77,0,112	0/1:8,0:8:11.14:106,0,11
chr10	41974042	.	AT	A	14010.22	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=2.441;DP=706;FS=8.416;HRun=8;HaplotypeScore=90.7634;InbreedingCoeff=0.9872;MQ=78.89;MQ0=0;MQRankSum=-4.332;QD=25.71;ReadPosRankSum=3.268;VQSLOD=5.1548;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,139,1650	0/0:8,0:8:21.06:0,21,254	0/0:27,0:27:54.23:0,54,658	0/0:20,0:18:36.05:0,36,411	0/0:25,0:25:69.21:0,69,833	1/1:1,27:28:78.13:753,78,0	1/1:2,20:22:60.10:579,60,0	1/1:3,29:32:87.14:840,87,0	1/1:1,27:28:75.12:724,75,0	1/1:3,23:26:69.11:666,69,0	1/1:1,20:21:57.09:550,57,0	1/1:2,26:28:72.11:695,72,0	1/1:1,21:22:57.09:550,57,0	1/1:0,25:25:69.11:666,69,0	1/1:2,24:26:66.10:637,66,0	0/0:29,2:31:29.30:0,29,902	1/1:1,27:28:81.13:782,81,0	1/1:2,24:26:72.11:695,72,0	1/1:1,18:19:54.06:511,54,0	1/1:2,30:32:84.13:811,84,0	1/1:4,22:26:63.10:608,63,0	1/1:3,20:23:57.09:550,57,0	1/1:1,19:20:48.08:464,48,0	1/1:2,24:26:69.11:666,69,0	1/1:1,22:23:66.10:637,66,0	1/1:0,27:27:81.13:782,81,0	1/1:2,29:31:78.12:753,78,0	1/1:2,4:6:8.97:87,9,0
chr10	41977122	.	G	GGT	2520.01	PASS	AB=0.851;AC=38;AF=0.679;AN=56;BaseQRankSum=-1.444;DP=596;FS=3.459;HRun=0;HaplotypeScore=112.9484;InbreedingCoeff=0.2982;MQ=70.01;MQ0=6;MQRankSum=-1.444;QD=4.96;ReadPosRankSum=-0.268;VQSLOD=2.5903;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:32,0:32:22.71:192,23,0	0/0:6,0:6:2.83:0,3,14	0/1:24,0:22:0:0,0,0	0/1:16,0:12:0:0,0,0	0/1:15,0:25:38.14:40,0,38	1/1:19,0:19:9.03:133,9,0	1/1:10,8:18:18.06:260,18,0	1/1:21,0:20:11.97:104,12,0	0/1:28,2:31:19.91:205,0,20	0/0:20,0:19:5:0,5,32	0/0:19,0:21:15.72:0,16,223	0/1:13,9:22:20.70:122,0,21	1/1:13,11:24:12.04:179,12,0	1/1:10,8:19:18.06:268,18,0	0/0:16,0:16:18.04:0,18,189	0/1:19,4:26:51.63:158,0,52	1/1:22,1:28:8.02:54,8,0	0/1:21,1:22:14.24:14,0,253	1/1:9,0:8:12.01:118,12,0	1/1:11,0:16:0.67:22,1,0	1/1:23,0:21:14.98:160,15,0	1/1:15,8:25:3.01:45,3,0	1/1:21,0:21:8.92:65,9,0	0/1:15,9:25:17.69:164,0,18	0/0:25,0:25:23.93:0,24,235	1/1:19,0:22:14.97:141,15,0	1/1:15,0:27:20.96:174,21,0	1/1:10,0:10:8.96:69,9,0
chr10	41978286	.	T	TG	24958.09	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-16.558;DP=735;FS=3.761;HRun=0;HaplotypeScore=64.7981;InbreedingCoeff=0.9999;MQ=86.36;MQ0=0;MQRankSum=-6.036;QD=44.41;ReadPosRankSum=2.325;VQSLOD=5.2662;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,132,1825	0/0:17,0:17:51.17:0,51,712	0/0:24,0:23:61.90:0,62,793	0/0:26,0:25:66.18:0,66,883	0/0:41,0:41:99:0,123,1668	1/1:0,32:32:93.32:1486,93,0	1/1:0,29:29:81.28:1292,81,0	1/1:1,29:30:87.27:1361,87,0	1/1:1,18:19:51.17:815,51,0	1/1:0,40:40:99:1913,120,0	1/1:0,23:23:66.23:1055,66,0	1/1:0,24:24:72.25:1150,72,0	1/1:0,34:34:84.29:1342,84,0	1/1:0,16:16:42.14:670,42,0	1/1:2,20:22:54.18:863,54,0	0/0:20,0:20:60.20:0,60,839	1/1:2,24:26:72.25:1151,72,0	1/1:1,11:12:33.11:527,33,0	1/1:0,20:20:60.20:955,60,0	1/1:0,30:30:84.29:1343,84,0	1/1:0,32:32:96.33:1534,96,0	1/1:0,16:16:36.12:575,36,0	1/1:2,29:31:84.20:1342,84,0	1/1:1,31:32:84.29:1342,84,0	1/1:0,24:24:72.25:1151,72,0	1/1:1,28:29:81.25:1269,81,0	1/1:2,18:20:57.19:909,57,0	1/1:2,19:21:57.19:911,57,0
chr10	41979277	.	GT	G	5191.25	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=14.838;DP=629;FS=0.743;HRun=2;HaplotypeScore=68.6780;InbreedingCoeff=0.9688;MQ=87.52;MQ0=0;MQRankSum=-4.160;QD=33.71;ReadPosRankSum=-1.648;VQSLOD=4.3183;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:36:99:0,105,1528	0/0:15,0:15:45.13:0,45,634	0/0:26,0:26:68.40:0,68,1028	0/0:18,0:18:45.15:0,45,667	0/0:18,0:18:54.17:0,54,788	0/0:13,0:13:39.13:0,39,584	0/0:18,0:18:54.16:0,54,769	1/1:2,30:32:87.25:1089,87,0	0/0:20,0:20:57.19:0,57,853	0/0:33,0:33:90.29:0,90,1328	0/0:20,0:20:57.14:0,57,809	0/0:22,0:22:66.22:0,66,973	0/0:22,0:22:66.18:0,66,962	0/0:19,0:19:57.18:0,57,834	0/0:31,0:31:93.32:0,93,1393	0/0:12,0:12:36.12:0,36,539	0/0:39,0:39:99:0,117,1689	0/0:14,0:14:42.14:0,42,624	1/1:0,21:21:63.20:817,63,0	1/1:2,31:33:78.25:999,78,0	1/1:0,11:11:33.11:428,33,0	0/0:26,0:26:78.26:0,78,1147	0/0:24,0:24:72.24:0,72,1077	0/0:22,0:22:66.21:0,66,967	0/0:26,0:26:78.25:0,78,1147	1/1:1,15:16:3.25:535,3,0	1/1:2,22:24:57.18:740,57,0	1/1:0,17:17:45.15:584,45,0
chr10	41979661	.	G	GA	148.55	PASS	AB=0.974;AC=8;AF=0.143;AN=56;BaseQRankSum=10.624;DP=805;FS=0.000;HRun=4;HaplotypeScore=143.6397;InbreedingCoeff=-0.0138;MQ=80.90;MQ0=0;MQRankSum=-0.238;QD=0.83;ReadPosRankSum=1.484;VQSLOD=-0.3059;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,141,1578	0/0:11,0:11:33.09:0,33,374	0/0:28,0:28:69.12:0,69,749	0/0:19,0:19:28.49:0,28,490	0/0:25,0:25:75.21:0,75,845	0/0:26,0:26:75.20:0,75,841	0/0:36,0:36:99:0,99,1094	0/1:32,1:33:39.28:57,0,39	0/0:37,0:37:99:0,108,1224	0/0:28,0:28:78.22:0,78,878	0/0:18,0:18:54.11:0,54,591	0/0:40,0:40:99:0,111,1251	0/0:41,0:41:99:0,123,1384	0/0:29,0:29:84.21:0,84,932	0/0:43,0:43:99:0,126,1426	0/0:37,0:37:99:0,102,1146	0/0:25,0:25:72.16:0,72,791	0/0:26,0:26:72.17:0,72,803	0/1:21,0:21:25.59:26,0,33	0/1:26,1:27:25.98:26,0,96	0/1:22,1:23:26.97:40,0,27	0/0:18,0:18:51.14:0,51,577	0/0:29,0:29:72.20:0,72,814	0/0:31,0:31:87.25:0,87,986	0/0:28,0:28:84.24:0,84,951	0/1:33,0:33:13.45:13,0,132	0/1:39,2:41:55.56:109,0,56	1/1:1,0:1:0.89:2,1,0
chr10	41980223	.	CA	C	9048.18	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=9.968;DP=549;FS=0.346;HRun=7;HaplotypeScore=53.7948;InbreedingCoeff=0.9941;MQ=82.91;MQ0=0;MQRankSum=-2.262;QD=26.85;ReadPosRankSum=2.825;VQSLOD=5.4051;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,26:26:75.17:765,75,0	0/0:7,0:7:21.07:0,21,264	0/0:16,0:16:29.94:0,30,336	0/0:17,0:16:14.45:0,14,196	0/0:22,0:22:63.19:0,63,779	1/1:2,24:26:63.14:643,63,0	1/1:0,20:20:45.10:459,45,0	0/0:37,0:37:84.26:0,84,1044	1/1:0,20:20:57.13:581,57,0	1/1:1,16:17:48.11:489,48,0	1/1:1,21:22:54.11:548,54,0	1/1:2,18:20:54.10:543,54,0	1/1:2,16:18:48.11:490,48,0	1/1:2,15:17:39.09:398,39,0	1/1:1,28:29:78.18:796,78,0	1/1:2,19:21:54:551,54,0	1/1:0,14:14:42.10:429,42,0	1/1:0,9:9:24.05:245,24,0	0/0:28,0:28:75.19:0,75,918	0/0:15,0:15:39.12:0,39,491	0/0:15,0:15:42.13:0,42,528	1/1:1,15:16:45.10:459,45,0	1/1:1,16:17:48.11:490,48,0	1/1:2,20:22:57.13:582,57,0	1/1:1,22:23:57.13:582,57,0	0/0:23,0:23:60.19:0,60,755	0/0:27,0:27:75.24:0,75,943	0/0:5,0:5:15.05:0,15,189
chr10	41980581	.	CA	C	3714.88	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=13.194;DP=554;FS=2.725;HRun=8;HaplotypeScore=52.8005;InbreedingCoeff=0.9273;MQ=76.04;MQ0=0;MQRankSum=0.647;QD=22.24;ReadPosRankSum=-0.319;VQSLOD=3.7354;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:57.15:0,57,665	0/0:7,0:7:18.05:0,18,217	0/1:12,0:11:3.23:3,0,108	0/0:10,1:11:15.05:0,15,140	0/0:30,0:30:90.26:0,90,1073	0/0:34,0:34:99:0,102,1232	0/0:23,0:23:69.21:0,69,834	1/1:7,28:35:84.12:805,84,0	0/0:14,0:14:42.11:0,42,485	0/0:29,0:29:81.22:0,81,956	0/0:22,0:22:57.13:0,57,672	0/0:12,0:12:36.11:0,36,435	0/0:15,0:15:39.12:0,39,470	0/0:23,0:23:60.17:0,60,713	0/0:24,0:24:69.20:0,69,825	0/0:16,0:16:48.13:0,48,564	0/0:22,1:23:40.23:0,40,767	0/0:19,0:19:45.12:0,45,531	1/1:2,15:17:45.05:427,45,0	1/1:0,19:20:56.12:527,56,0	1/1:0,21:21:57.09:551,57,0	0/0:11,0:11:27.08:0,27,326	0/0:11,0:11:30.09:0,30,362	0/0:30,0:30:90.28:0,90,1087	0/0:14,0:14:42.13:0,42,503	1/1:4,22:26:32.84:591,33,0	1/1:2,27:29:72.11:695,72,0	1/1:0,7:7:12.02:116,12,0
chr10	41981091	.	G	GT	14866.01	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=14.015;DP=605;FS=15.261;HRun=1;HaplotypeScore=169.8074;InbreedingCoeff=0.9945;MQ=83.02;MQ0=0;MQRankSum=-8.150;QD=28.48;ReadPosRankSum=4.839;VQSLOD=2.9126;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,13:14:39.09:411,39,0	0/0:14,0:14:42.14:0,42,587	0/0:24,0:24:63.19:0,63,862	0/0:15,0:15:42.12:0,42,576	0/0:30,0:30:90.28:0,90,1237	1/1:2,25:27:67.10:788,67,0	1/1:1,17:19:53.44:546,53,0	1/1:3,17:20:59.24:541,59,0	1/1:3,20:23:28.54:587,29,0	1/1:4,36:40:99:1237,114,0	1/1:3,15:18:41.27:525,41,0	1/1:1,23:24:58.87:705,59,0	1/1:2,15:18:41.27:513,41,0	1/1:4,26:30:73.94:829,74,0	1/1:3,22:25:73.67:713,74,0	1/1:2,25:27:77.52:822,78,0	1/1:1,12:14:17.68:292,18,0	1/1:1,11:12:36.05:371,36,0	1/1:7,7:14:24.15:323,24,0	1/1:2,18:20:46.82:559,47,0	1/1:4,25:31:73.71:848,74,0	1/1:4,23:27:64.69:714,65,0	1/1:1,15:16:48.08:484,48,0	1/1:0,8:8:18.04:190,18,0	1/1:3,25:28:70.92:864,71,0	1/1:0,19:24:69.76:729,70,0	1/1:0,28:28:84.14:844,84,0	1/1:4,11:15:45.02:430,45,0
chr10	41981092	.	G	GT	13291.41	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=13.577;DP=604;FS=12.971;HRun=0;HaplotypeScore=176.4030;InbreedingCoeff=0.9974;MQ=83.05;MQ0=0;MQRankSum=-7.518;QD=25.51;ReadPosRankSum=3.274;VQSLOD=3.4969;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,13:14:39.04:375,39,0	0/0:14,0:14:42.14:0,42,586	0/0:24,0:24:69.19:0,69,914	0/0:15,0:15:42.12:0,42,578	0/0:30,0:30:87.29:0,87,1211	1/1:3,25:28:78.51:727,79,0	1/1:2,17:19:56.98:515,57,0	1/1:3,17:20:55.39:452,55,0	1/1:4,19:23:59.43:551,59,0	1/1:4,36:40:99:1106,116,0	1/1:3,15:18:50.41:468,50,0	1/1:3,23:26:69.03:651,69,0	1/1:2,15:18:54.04:507,54,0	1/1:4,26:30:86.92:785,87,0	1/1:2,22:24:69.25:620,69,0	1/1:2,25:27:78.54:754,79,0	1/1:3,12:15:32.87:304,33,0	1/1:1,11:12:33.05:321,33,0	1/1:6,7:13:29.64:251,30,0	1/1:2,18:20:54.48:494,54,0	1/1:7,25:32:80.12:731,80,0	1/1:4,23:27:75.22:652,75,0	1/1:1,15:16:47.99:436,48,0	1/1:0,8:8:18.01:171,18,0	1/1:2,25:27:74.75:736,75,0	1/1:5,19:24:63.16:599,63,0	1/1:0,28:28:83.99:762,84,0	1/1:1,11:12:35.99:324,36,0
chr10	41981095	.	G	GTCT	3177.56	PASS	AB=0.995;AC=35;AF=0.625;AN=56;BaseQRankSum=8.949;DP=635;FS=9.247;HRun=0;HaplotypeScore=241.4059;InbreedingCoeff=0.1782;MQ=80.82;MQ0=0;MQRankSum=5.217;QD=6.06;ReadPosRankSum=7.722;VQSLOD=0.5340;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:15,0:15:15.91:78,0,16	0/0:14,0:14:42.14:0,42,780	0/0:23,0:23:62.70:0,63,1100	0/0:15,0:15:42.14:0,42,770	0/0:30,0:30:90.31:0,90,1665	1/1:31,0:31:17.64:162,18,0	1/1:18,1:19:33.15:226,33,0	0/0:29,0:29:6.28:0,6,67	0/1:26,0:26:44.14:112,0,44	1/1:39,0:39:55.17:352,55,0	1/1:20,0:20:3.29:135,3,0	0/1:29,0:29:26.53:101,0,27	0/1:19,0:19:31.23:95,0,31	0/1:32,0:32:1.06:133,0,1	1/1:25,0:25:24.35:199,24,0	1/1:26,0:26:43.68:202,44,0	0/1:16,0:16:14.49:47,0,14	1/1:13,0:13:22.19:100,22,0	0/1:11,0:11:3.66:63,0,4	1/1:21,0:21:25.97:159,26,0	0/1:32,2:34:33.34:234,0,33	0/1:28,0:28:18.24:233,0,18	0/1:18,0:18:6.20:72,0,6	1/1:8,0:8:7.79:37,8,0	1/1:26,0:26:48.86:204,49,0	1/1:22,1:23:21.85:206,22,0	0/1:33,0:33:10.05:122,0,10	1/1:12,0:12:14.47:89,14,0
chr10	41981671	.	CT	C	7020.38	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=12.782;DP=623;FS=3.214;HRun=2;HaplotypeScore=59.6425;InbreedingCoeff=0.9989;MQ=83.13;MQ0=0;MQRankSum=-1.064;QD=36.00;ReadPosRankSum=0.407;VQSLOD=5.3117;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,117,1732	0/0:8,0:8:24.08:0,24,360	0/0:14,0:14:33.09:0,33,468	0/0:22,0:22:57.16:0,57,801	0/0:18,0:18:54.18:0,54,809	0/0:25,0:25:75.21:0,75,1099	0/0:24,0:24:72.24:0,72,1060	1/1:3,26:29:78.24:998,78,0	0/0:28,0:28:81.27:0,81,1213	0/0:16,0:16:48.16:0,48,700	0/0:18,0:18:54.16:0,54,770	0/0:28,0:28:84.27:0,84,1237	0/0:22,0:22:63.20:0,63,922	0/0:25,0:25:75.25:0,75,1124	0/0:26,0:26:78.26:0,78,1168	0/0:23,0:23:66.22:0,66,989	0/0:22,0:22:63.21:0,63,941	0/0:10,0:10:30.10:0,30,450	1/1:1,22:23:66.21:856,66,0	1/1:1,13:14:39.13:506,39,0	1/1:0,51:51:99:1753,135,0	0/0:9,0:9:24.08:0,24,360	0/0:15,0:15:45.14:0,45,654	0/0:17,0:17:51.17:0,51,764	0/0:19,0:19:57.17:0,57,831	1/1:1,28:29:84.26:1076,84,0	1/1:0,40:40:99:1480,114,0	1/1:0,9:9:27.09:351,27,0
chr10	41982363	.	G	GA	5184.65	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-12.568;DP=604;FS=7.463;HRun=9;HaplotypeScore=77.5930;InbreedingCoeff=0.9826;MQ=76.37;MQ0=0;MQRankSum=-1.654;QD=24.69;ReadPosRankSum=0.510;VQSLOD=5.4010;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:71.98:0,72,625	0/0:11,0:11:29.99:0,30,260	0/0:17,0:18:26.44:0,26,248	0/0:14,0:15:6.73:0,7,229	0/0:32,1:33:50.79:0,51,670	1/1:1,26:28:78:830,78,0	1/1:4,25:28:46.14:737,46,0	0/0:1,0:24:40.47:0,40,122	1/1:6,19:24:28.09:538,28,0	0/0:18,0:18:47.99:0,48,415	0/0:19,0:19:50.98:0,51,442	1/1:1,14:15:39.06:418,39,0	1/1:4,27:31:66.12:730,66,0	1/1:5,14:19:16.06:405,16,0	0/0:25,0:25:68.99:0,69,599	0/0:24,0:24:59.96:0,60,517	0/0:25,2:27:38.80:0,39,565	0/0:13,0:14:29.02:0,29,240	0/0:1,0:15:24.23:0,24,70	0/0:2,0:23:40.73:0,41,120	0/0:1,0:24:44.82:0,45,132	1/1:6,20:26:57.15:630,57,0	1/1:2,14:16:42.11:465,42,0	1/1:5,16:21:39.11:431,39,0	0/0:16,0:16:41.98:0,42,365	0/0:5,0:24:36.66:0,37,108	0/0:1,0:22:36.67:0,37,108	0/0:0,0:12:24.44:0,24,72
chr10	41982509	.	CACAT	C	1697.92	PASS	AB=0.990;AC=30;AF=0.600;AN=50;BaseQRankSum=-0.950;DP=912;FS=8.183;HRun=0;HaplotypeScore=112.2522;InbreedingCoeff=0.2037;MQ=29.99;MQ0=239;MQRankSum=2.723;QD=2.71;ReadPosRankSum=-0.841;VQSLOD=1.4249;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:51,0:40:65.05:102,0,65	0/0:22,0:14:10.14:0,10,194	./.	./.	1/1:38,0:30:23.93:189,24,0	1/1:30,1:26:6.91:115,7,0	1/1:37,0:26:25.57:206,26,0	0/0:44,0:16:34.31:0,34,258	0/1:27,0:12:13.71:24,0,14	0/1:48,0:26:27.48:27,0,130	1/1:26,0:15:11.96:94,12,0	0/1:24,0:14:14.03:52,0,14	0/1:34,2:21:23.58:213,0,24	0/1:31,1:17:8.97:77,0,9	1/1:33,0:21:17.60:116,18,0	0/1:51,0:39:38.38:117,0,38	1/1:35,0:25:8.78:149,9,0	1/1:28,0:16:3.50:88,3,0	0/0:13,0:8:8.98:0,9,72	0/0:31,0:20:29.47:0,29,227	0/0:86,0:50:8.59:0,9,172	./.	1/1:19,0:9:3.48:37,3,0	1/1:39,3:33:20.99:205,21,0	1/1:31,0:16:6.08:30,6,0	0/0:43,0:21:0.98:0,1,179	0/1:21,0:14:1.81:2,0,77	1/1:17,0:6:2.96:19,3,0
chr10	41982519	.	C	CAT	287.28	PASS	AB=0.963;AC=8;AF=0.160;AN=50;BaseQRankSum=1.237;DP=971;FS=7.163;HRun=0;HaplotypeScore=107.8202;InbreedingCoeff=0.1033;MQ=26.35;MQ0=297;MQRankSum=2.396;QD=1.06;ReadPosRankSum=-0.382;VQSLOD=1.5372;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:50,5:40:48.09:76,0,48	0/0:31,0:15:17.85:0,18,204	./.	./.	0/1:37,0:28:0.46:21,0,0	0/0:30,0:24:9.65:0,10,86	0/0:33,0:20:13.57:0,14,94	0/0:50,0:14:38.64:0,39,272	0/0:36,0:14:7.97:0,8,48	0/0:50,0:24:12.64:0,13,305	1/1:26,0:14:3.65:35,4,0	0/0:27,0:14:6.08:0,6,46	0/0:42,0:25:27.01:0,27,258	0/0:36,0:17:9.01:0,9,101	0/1:33,1:21:6.41:66,0,6	0/1:47,2:37:53.62:95,0,54	0/0:43,0:25:29.53:0,30,201	0/1:32,1:18:37.63:38,0,97	0/0:14,0:7:8.73:0,9,73	0/0:32,0:21:29.77:0,30,223	0/0:86,0:45:19.61:0,20,196	./.	0/0:20,0:9:5.99:0,6,50	0/0:40,0:28:8.70:0,9,55	0/1:35,1:19:14.89:82,0,15	0/0:49,0:20:28.09:0,28,224	0/0:19,0:11:9.79:0,10,65	0/0:24,0:7:2.92:0,3,17
chr10	41982573	.	CAT	C	1353.82	PASS	AB=0.983;AC=33;AF=0.660;AN=50;BaseQRankSum=-2.854;DP=927;FS=47.846;HRun=0;HaplotypeScore=88.9096;InbreedingCoeff=-0.1935;MQ=27.54;MQ0=281;MQRankSum=2.391;QD=1.55;ReadPosRankSum=-1.574;VQSLOD=-0.2443;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:52,0:36:14.80:119,15,0	0/1:32,0:14:18.75:22,0,19	./.	./.	1/1:37,0:30:14.67:118,15,0	0/1:30,3:26:13.99:75,0,14	0/1:38,0:19:5.42:17,0,5	0/1:47,0:14:10.59:11,0,101	1/1:26,0:8:3.26:10,3,0	0/1:40,0:19:29.32:74,0,29	1/1:27,0:14:11.98:97,12,0	1/1:27,0:14:4.06:17,4,0	0/1:40,3:26:6.27:77,0,6	0/1:39,1:19:11.05:101,0,11	1/1:35,0:21:5.57:46,6,0	1/1:46,0:30:9.17:55,9,0	0/1:41,0:23:5.32:152,0,5	1/1:32,0:16:9.31:160,9,0	0/0:12,0:8:9.47:0,9,54	0/0:21,0:10:2.60:0,3,10	0/1:85,0:43:22.95:59,0,23	0/1:31,0:18:8.68:28,0,9	./.	0/1:38,2:30:20.17:20,0,22	1/1:36,0:20:11.83:89,12,0	0/1:38,0:17:5.73:6,0,105	0/1:24,0:18:9.25:98,0,9	1/1:23,0:7:5.99:49,6,0
chr10	41982575	.	TACACACACACACACAC	T	1116.70	PASS	AB=1.000;AC=12;AF=0.231;AN=52;BaseQRankSum=-1.186;DP=933;FS=7.125;HRun=0;HaplotypeScore=149.8990;InbreedingCoeff=0.2322;MQ=28.56;MQ0=271;MQRankSum=5.876;QD=3.70;ReadPosRankSum=1.245;VQSLOD=2.1647;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:36:17.99:0,18,146	0/0:33,0:15:4.23:0,4,29	./.	./.	0/0:37,0:31:8.80:0,9,75	0/1:32,0:25:33.55:269,0,34	1/1:38,0:19:5.90:71,6,0	0/0:48,0:16:29.74:0,30,253	0/1:26,0:9:2.19:2,0,4	0/0:41,0:21:32.60:0,33,293	0/0:29,0:16:14.97:0,15,121	0/1:28,0:16:28.17:28,0,32	0/1:44,0:27:25.05:247,0,25	0/1:40,0:20:5.69:194,0,6	0/0:34,0:21:8.94:0,9,70	0/0:44,0:30:3.87:0,4,26	0/0:42,0:24:31.12:0,31,204	0/0:32,0:15:26.76:0,27,207	0/0:16,0:12:15.79:0,16,192	0/0:21,0:10:2.69:0,3,45	0/0:83,0:42:16.42:0,16,183	1/1:28,0:17:16.21:154,16,0	1/1:11,10:14:0.38:1,0,0	0/1:45,0:35:13.36:289,0,13	0/0:36,0:20:11.99:0,12,104	0/0:38,0:18:26.91:0,27,398	0/0:23,0:18:20.71:0,21,146	0/0:22,0:7:5.99:0,6,49
chr10	41982591	.	C	CAT	1833.45	PASS	AB=0.949;AC=13;AF=0.232;AN=56;BaseQRankSum=-0.887;DP=877;FS=20.137;HRun=0;HaplotypeScore=92.7962;InbreedingCoeff=0.5127;MQ=34.99;MQ0=185;MQRankSum=4.920;QD=6.43;ReadPosRankSum=2.267;VQSLOD=1.7498;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:44:28.44:0,28,218	0/0:28,0:12:11.96:0,12,93	0/0:6,0:4:9.02:0,9,98	0/0:10,0:7:20.85:0,21,190	0/0:40,0:36:35.56:0,36,284	1/1:30,0:25:6.85:367,7,0	1/1:38,0:25:11.51:220,12,0	0/0:35,0:23:53.21:0,53,374	0/1:23,0:9:6.22:43,0,6	0/0:35,0:22:28.62:0,29,297	0/0:27,0:18:23.77:0,24,185	0/1:19,10:21:26.85:28,0,27	0/1:44,0:32:49.10:413,0,49	0/1:37,0:21:6.16:327,0,6	0/0:28,0:23:17.74:0,18,137	0/0:42,0:32:21.32:0,21,148	0/0:39,0:26:40.97:0,41,280	0/0:31,0:19:37.15:0,37,252	0/0:19,0:15:35.59:0,36,258	0/0:19,0:12:11.63:0,12,118	0/0:71,0:35:18.41:0,18,162	1/1:23,0:18:8.07:216,8,0	0/1:17,0:12:0.19:0,0,0	1/1:42,0:36:6.65:379,7,0	0/0:33,0:21:24.44:0,24,205	0/0:34,0:21:44.45:0,44,361	0/0:18,0:16:18.20:0,18,122	0/0:21,0:6:8.99:0,9,74
chr10	41983506	.	TA	T	5325.50	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=16.682;DP=708;FS=0.000;HRun=1;HaplotypeScore=87.9149;InbreedingCoeff=0.9983;MQ=88.08;MQ0=0;MQRankSum=-3.814;QD=38.59;ReadPosRankSum=-1.774;VQSLOD=4.4714;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,135,2124	0/0:11,0:11:33.11:0,33,527	0/0:29,0:29:87.23:0,87,1306	0/0:23,0:23:59.35:0,59,935	0/0:38,0:38:99:0,114,1802	0/0:13,0:13:39.13:0,39,623	0/0:22,0:22:66.23:0,66,1055	1/1:0,30:30:90.26:1200,90,0	0/0:32,0:32:96.33:0,96,1532	0/0:27,0:27:78.26:0,78,1226	0/0:27,0:27:81.28:0,81,1281	0/0:21,0:21:63.19:0,63,961	0/0:21,0:21:60.19:0,60,926	0/0:31,0:31:93.32:0,93,1480	0/0:30,0:30:90.28:0,90,1399	0/0:34,0:34:99:0,102,1608	0/0:35,0:35:99:0,105,1653	0/0:17,0:17:51.17:0,51,807	1/1:0,22:22:63.18:835,63,0	1/1:0,11:11:27.09:377,27,0	1/1:0,31:31:77.83:1068,78,0	0/0:32,0:32:96.31:0,96,1508	0/0:27,0:27:78.27:0,78,1231	0/0:37,0:37:99:0,111,1674	0/0:18,0:18:51.16:0,51,785	1/1:0,19:19:57.19:797,57,0	1/1:0,19:19:57.19:797,57,0	1/1:0,6:6:18.06:252,18,0
chr10	41983897	.	ACT	A	3512.34	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=9.788;DP=541;FS=17.864;HRun=0;HaplotypeScore=133.8865;InbreedingCoeff=0.9971;MQ=64.55;MQ0=11;MQRankSum=-4.372;QD=25.64;ReadPosRankSum=2.030;VQSLOD=3.2365;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:34:50.98:0,51,759	0/0:12,0:12:36.12:0,36,609	0/0:34,0:20:53.73:0,54,775	0/0:22,0:10:19.84:0,20,273	0/0:37,0:37:90.20:0,90,1306	1/1:3,13:16:33.04:397,33,0	1/1:2,8:10:23.99:276,24,0	0/0:29,0:29:78.27:0,78,1286	1/1:2,10:12:30.02:356,30,0	0/0:20,0:20:51.17:0,51,841	0/0:25,0:25:57.03:0,57,791	1/1:5,20:25:54.09:669,54,0	1/1:0,16:16:45.08:550,45,0	1/1:5,15:20:38.92:415,39,0	0/0:18,0:18:29.85:0,30,409	0/0:9,0:9:24.08:0,24,402	0/0:21,0:21:57.20:0,57,975	0/0:17,0:17:36.12:0,36,614	0/0:15,0:15:39.13:0,39,667	0/0:10,0:10:27.09:0,27,463	0/0:22,0:22:51.17:0,51,861	1/1:0,10:10:29.84:277,30,0	1/1:3,10:13:32.88:335,33,0	1/1:1,14:15:20.98:237,21,0	0/0:32,0:32:81.05:0,81,1153	0/0:26,0:25:63.21:0,63,1060	0/0:9,0:9:27.08:0,27,407	0/0:11,0:11:33.04:0,33,452
chr10	41983917	.	AGTGTGT	A	3109.91	PASS	AB=0.958;AC=35;AF=0.673;AN=52;BaseQRankSum=8.448;DP=600;FS=4.812;HRun=0;HaplotypeScore=180.8718;InbreedingCoeff=0.7145;MQ=52.12;MQ0=40;MQRankSum=-7.204;QD=8.57;ReadPosRankSum=0.953;VQSLOD=2.6783;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:37:8.65:109,9,0	0/0:12,0:13:30.09:0,30,802	./.	./.	1/1:11,0:33:5.59:83,6,0	1/1:9,2:11:5.94:43,6,0	1/1:7,2:10:5.99:104,6,0	0/0:27,0:26:32.45:0,32,674	1/1:8,7:15:8.46:275,8,0	1/1:10,8:17:27.95:417,28,0	1/1:8,17:24:6.02:123,6,0	1/1:17,6:22:27.09:502,27,0	1/1:11,6:17:18.05:333,18,0	1/1:5,9:17:17.78:249,18,0	1/1:3,13:17:12.04:227,12,0	1/1:4,0:9:12.04:161,12,0	0/0:25,0:26:48.12:0,48,1054	1/1:9,1:18:9.03:146,9,0	0/0:20,0:19:18.16:0,18,393	0/0:13,0:11:17.91:0,18,460	0/0:34,0:35:48.34:0,48,1333	1/1:5,12:17:5.96:103,6,0	1/1:6,7:14:2.82:61,3,0	1/1:13,9:24:11.66:151,12,0	1/1:10,14:24:9.03:185,9,0	0/1:22,1:21:25.40:25,0,804	0/0:12,0:12:24.08:0,24,722	0/0:7,0:6:3.01:0,3,98
chr10	41984442	.	TC	T	992.62	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.696;DP=705;FS=5.577;HRun=2;HaplotypeScore=88.7427;InbreedingCoeff=0.9958;MQ=72.06;MQ0=0;MQRankSum=-0.446;QD=35.45;ReadPosRankSum=-0.014;VQSLOD=3.8324;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,132,1914	0/0:13,0:13:39.13:0,39,584	0/0:26,0:25:47.24:0,47,777	0/0:26,0:26:36.99:0,37,873	1/1:0,28:28:84.27:1088,84,0	0/0:24,0:24:66.22:0,66,985	0/0:22,0:22:66.13:0,66,938	0/0:27,0:27:62.27:0,62,1127	0/0:28,0:28:84.28:0,84,1258	0/0:27,0:27:75.25:0,75,1122	0/0:16,0:16:48.15:0,48,700	0/0:19,0:19:57.18:0,57,833	0/0:27,0:27:81.26:0,81,1194	0/0:21,0:21:63.20:0,63,922	0/0:32,0:32:93.32:0,93,1393	0/0:34,0:34:99:0,102,1455	0/0:33,0:33:99:0,99,1482	0/0:21,0:21:63.19:0,63,917	0/0:21,0:21:60.20:0,60,897	0/0:28,0:28:81.25:0,81,1174	0/0:20,0:20:57.18:0,57,833	0/0:19,0:19:57.17:0,57,814	0/0:24,0:24:72.23:0,72,1059	0/0:23,0:23:66.22:0,66,988	0/0:27,0:27:81.24:0,81,1157	0/0:35,0:35:99:0,105,1552	0/0:33,0:33:96.31:0,96,1416	0/0:7,0:7:21.05:0,21,275
chr10	41984548	.	T	TC	6481.92	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=4.799;DP=678;FS=8.040;HRun=2;HaplotypeScore=72.0332;InbreedingCoeff=0.9943;MQ=76.01;MQ0=0;MQRankSum=-1.775;QD=41.02;ReadPosRankSum=-2.473;VQSLOD=3.9112;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,147,1909	0/0:11,0:11:33.11:0,33,429	0/0:20,0:20:57.17:0,57,724	0/0:24,0:24:63.25:0,63,817	0/0:26,0:26:75.21:0,75,944	0/0:20,0:20:60.20:0,60,779	0/0:28,0:28:78.25:0,78,1013	1/1:1,25:26:69.23:1031,69,0	0/0:24,0:24:72.22:0,72,920	0/0:23,0:23:66.21:0,66,857	0/0:23,0:23:69.21:0,69,882	0/0:24,0:24:72.23:0,72,935	0/0:36,0:36:99:0,102,1322	0/0:17,0:17:51.17:0,51,662	0/0:33,0:33:99:0,99,1270	0/0:36,0:36:99:0,105,1364	0/0:22,0:22:63.19:0,63,804	0/0:22,0:22:63.20:0,63,816	1/1:1,26:27:78.26:1165,78,0	1/1:1,18:19:54.14:784,54,0	1/1:1,31:32:87.29:1304,87,0	0/0:16,0:16:48.16:0,48,623	0/0:17,0:17:45.15:0,45,584	0/0:20,0:20:57.19:0,57,740	0/0:28,0:28:84.26:0,84,1078	1/1:0,18:18:54.18:804,54,0	1/1:0,29:29:81.27:1214,81,0	1/1:2,5:7:12.04:180,12,0
chr10	41986293	.	C	CA	6601.21	PASS	AB=0.531;AC=13;AF=0.232;AN=56;BaseQRankSum=18.159;DP=779;FS=13.479;HRun=1;HaplotypeScore=112.2907;InbreedingCoeff=0.8958;MQ=86.99;MQ0=0;MQRankSum=-8.745;QD=39.53;ReadPosRankSum=-0.638;VQSLOD=2.9557;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,126,1603	0/0:4,0:4:12.02:0,12,140	0/0:26,0:26:62.51:0,63,932	0/0:29,0:29:72.12:0,72,873	0/0:34,0:34:93.30:0,93,1207	0/0:30,0:30:87.28:0,87,1130	0/0:36,0:36:99:0,108,1358	1/1:4,25:30:84.24:1227,84,0	0/0:41,0:41:99:0,123,1583	0/0:23,0:23:66.21:0,66,847	0/0:22,0:22:60.19:0,60,779	0/0:35,0:35:99:0,102,1309	0/0:29,0:29:81.25:0,81,1036	0/0:34,0:34:99:0,99,1285	0/0:31,0:31:84.27:0,84,1091	0/0:23,0:23:69.22:0,69,896	0/0:38,0:38:99:0,111,1426	0/0:26,0:25:75.18:0,75,939	1/1:1,17:18:48.15:696,48,0	1/1:0,21:21:63.17:918,63,0	1/1:1,27:28:72.24:1079,72,0	0/0:28,0:28:84.22:0,84,1033	0/0:22,0:22:66.21:0,66,857	0/0:37,0:37:99:0,105,1363	0/0:20,0:20:60.20:0,60,779	0/1:4,30:34:17.57:1243,0,18	1/1:0,23:23:69.23:1034,69,0	1/1:2,11:13:27.09:404,27,0
chr10	41986623	.	T	TATTATTATTATGATG	10277.32	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=-1.476;DP=454;FS=17.018;HRun=0;HaplotypeScore=189.7300;InbreedingCoeff=0.8780;MQ=67.98;MQ0=1;MQRankSum=-11.440;QD=60.45;ReadPosRankSum=-2.646;VQSLOD=3.1132;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,0:19:19.67:140,20,0	0/0:7,0:7:18.06:0,18,716	0/0:13,0:13:36.08:0,36,1034	0/0:9,0:9:23.66:0,24,505	0/0:21,0:21:63.22:0,63,2535	0/0:19,0:19:57.14:0,57,1755	0/0:12,0:12:33.08:0,33,918	1/1:46,0:40:99:3096,115,0	0/0:17,0:17:51.16:0,51,1464	0/0:31,0:31:87.26:0,87,2995	0/0:19,0:19:54.13:0,54,1614	0/0:10,0:10:30.09:0,30,758	0/0:19,0:19:57.20:0,57,1907	0/0:11,0:11:27.09:0,27,968	0/0:13,0:13:39.12:0,39,1137	1/1:1,0:11:14.59:84,15,0	0/1:11,0:11:66.54:107,0,67	0/0:22,0:22:60.06:0,60,1842	1/1:5,6:20:51.05:1925,51,0	1/1:1,8:15:23.94:1016,24,0	1/1:3,0:3:5.99:50,6,0	0/0:18,0:18:51.12:0,51,1611	0/0:12,0:12:33.09:0,33,1299	0/0:9,0:9:21.07:0,21,827	0/0:22,0:22:63.15:0,63,1803	1/1:1,10:21:57.04:2445,57,0	1/1:0,7:21:14.76:1038,15,0	1/1:0,1:3:6.02:376,6,0
chr10	41986635	.	A	ATGATG	2441.66	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=7.705;DP=431;FS=12.502;HRun=0;HaplotypeScore=123.9626;InbreedingCoeff=0.5356;MQ=66.05;MQ0=1;MQRankSum=-8.163;QD=14.28;ReadPosRankSum=-2.996;VQSLOD=1.5882;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:17,0:17:19.17:328,0,19	0/0:7,0:7:21.05:0,21,403	0/0:14,0:14:41.50:0,41,752	0/1:8,0:8:0.87:1,0,319	0/0:19,0:19:57.20:0,57,1301	0/0:15,0:15:45.06:0,45,535	0/0:10,0:10:9.96:0,10,272	1/1:46,0:40:21.79:361,22,0	0/0:17,0:17:25.91:0,26,505	0/0:30,0:30:47.26:0,47,822	0/0:21,0:21:6.82:0,7,485	0/0:7,0:7:20.93:0,21,223	0/0:18,0:18:26.11:0,26,568	0/1:13,0:13:39.03:39,0,262	0/0:15,0:15:20.78:0,21,396	1/1:10,0:10:17.57:318,18,0	1/1:4,5:9:3.03:324,3,0	0/0:21,0:21:13.04:0,13,586	0/1:17,0:17:35.08:238,0,35	1/1:7,0:7:15.04:237,15,0	1/1:1,0:1:3:25,3,0	0/0:17,0:17:26.10:0,26,546	0/0:16,0:16:22.89:0,23,468	0/0:10,0:10:20.45:0,20,242	0/0:23,0:23:43.88:0,44,701	0/1:17,0:17:8.98:296,0,9	1/1:21,0:21:8.22:323,8,0	1/1:5,0:5:12.01:136,12,0
chr10	41987153	.	ACTCTCT	A	1556.02	PASS	AB=1.000;AC=26;AF=0.619;AN=42;BaseQRankSum=3.095;DP=315;FS=6.260;HRun=0;HaplotypeScore=85.2948;InbreedingCoeff=0.6079;MQ=66.57;MQ0=7;MQRankSum=-2.164;QD=7.70;ReadPosRankSum=-2.205;VQSLOD=1.0910;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:4,0:4:9.02:0,9,170	0/1:26,0:14:0:0,0,0	0/1:23,0:9:12.52:13,0,20	0/0:7,0:7:12.04:0,12,285	1/1:11,4:15:21.05:387,21,0	1/1:13,3:16:15.02:233,15,0	1/1:36,0:36:6.91:90,7,0	./.	0/0:6,0:6:6.02:0,6,125	0/0:5,0:9:9.02:0,9,195	1/1:3,5:8:3.01:61,3,0	1/1:7,1:8:9.01:145,9,0	1/1:8,3:11:18.04:301,18,0	0/0:8,0:8:9.03:0,9,229	./.	1/1:4,0:8:0.58:1,1,0	0/0:16,0:14:9.46:0,9,239	1/1:17,0:17:12.04:170,12,0	./.	./.	./.	./.	1/1:5,0:5:3.01:48,3,0	0/0:13,0:13:14.78:0,15,332	1/1:7,0:7:3.01:42,3,0	1/1:12,0:12:9.03:134,9,0	1/1:10,0:10:6.02:84,6,0
chr10	41987172	.	CTCTCTCTCTCTCTCTGTATATATATA	C	2895.20	PASS	AB=1.000;AC=17;AF=0.340;AN=50;BaseQRankSum=5.711;DP=241;FS=6.018;HRun=0;HaplotypeScore=141.0080;InbreedingCoeff=0.2969;MQ=50.80;MQ0=8;MQRankSum=-2.987;QD=24.96;ReadPosRankSum=1.437;VQSLOD=2.3246;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:8:3.01:0,3,69	0/0:3,0:3:9.03:0,9,488	0/0:13,0:3:5.91:0,6,39	0/1:16,0:6:23.02:23,0,145	0/0:6,0:6:12.04:0,12,711	0/1:14,0:14:48.10:48,0,274	0/0:12,0:12:24.04:0,24,488	0/1:30,0:30:99:605,0,110	./.	0/0:7,0:7:9.30:0,9,656	0/0:10,0:10:12.04:0,12,548	0/0:7,0:7:3:0,3,25	0/1:5,0:5:15.57:16,0,112	0/1:10,0:10:27.15:27,0,273	0/0:4,0:4:8.66:0,9,563	./.	0/0:8,0:8:8.52:0,9,544	0/0:12,0:10:21.07:0,21,1090	1/1:3,4:8:15.04:861,15,0	1/1:6,0:6:3:25,3,0	1/1:4,0:4:2.48:23,2,0	0/0:5,0:5:3:0,3,99	./.	0/0:5,0:5:8.98:0,9,167	0/0:10,0:10:14.68:0,15,876	1/1:1,0:3:6.02:294,6,0	1/1:1,11:12:9.03:626,9,0	1/1:1,5:7:9.03:507,9,0
chr10	41987186	.	CTGTATATATATATA	C	2606.91	PASS	AB=0.942;AC=20;AF=0.500;AN=40;BaseQRankSum=4.133;DP=173;FS=1.007;HRun=0;HaplotypeScore=80.2030;InbreedingCoeff=0.3852;MQ=46.63;MQ0=6;MQRankSum=-4.659;QD=26.07;ReadPosRankSum=2.863;VQSLOD=2.1021;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:6:3:0,3,27	0/0:1,0:1:2.99:0,3,24	./.	0/1:8,0:2:3.47:3,0,14	0/0:4,0:4:5.99:0,6,48	1/1:11,0:11:6.25:240,6,0	0/1:7,0:7:0.47:13,0,0	1/1:2,17:19:56.35:796,56,0	./.	0/0:5,0:5:6.68:0,7,118	0/0:8,0:8:2.99:0,3,24	1/1:6,0:6:3.01:52,3,0	1/1:3,0:3:6.02:156,6,0	1/1:4,0:4:9.03:240,9,0	0/0:3,0:3:4.83:0,5,45	./.	0/0:9,0:9:15.05:0,15,704	0/1:13,0:12:70.81:71,0,141	1/1:5,0:5:14.84:385,15,0	./.	./.	./.	./.	./.	0/0:11,0:11:5.81:0,6,17	0/1:4,0:4:27.39:220,0,27	1/1:11,0:11:9.03:253,9,0	1/1:6,1:7:9.03:320,9,0
chr10	41987188	.	GTATATATATATA	G	2007.41	PASS	AB=0.842;AC=20;AF=0.625;AN=32;BaseQRankSum=4.196;DP=167;FS=1.387;HRun=0;HaplotypeScore=76.6993;InbreedingCoeff=0.3535;MQ=46.40;MQ0=6;MQRankSum=-3.952;QD=22.56;ReadPosRankSum=1.366;VQSLOD=2.2486;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:7:6.01:0,6,100	./.	./.	./.	0/0:2,0:4:0:0,0,0	1/1:5,2:10:9.88:211,10,0	./.	1/1:19,0:19:18.40:416,18,0	./.	0/0:1,0:5:1.71:0,2,74	1/1:6,0:6:2.60:10,3,0	1/1:5,1:6:3.01:55,3,0	1/1:2,1:3:6.02:156,6,0	1/1:0,3:4:8.99:228,9,0	0/0:2,0:2:0.89:0,1,2	./.	0/0:8,0:8:15.05:0,15,689	0/1:7,0:11:76.71:77,0,97	1/1:5,0:5:11.69:319,12,0	./.	./.	./.	./.	./.	./.	0/1:5,0:4:27.47:177,0,27	1/1:11,0:11:9.03:212,9,0	1/1:7,0:7:9.03:263,9,0
chr10	41988196	.	TACACACACACACACACACACACACACACACACAC	T	9228.85	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=6.102;DP=577;FS=28.583;HRun=0;HaplotypeScore=411.5334;InbreedingCoeff=0.7143;MQ=52.77;MQ0=16;MQRankSum=-5.785;QD=47.82;ReadPosRankSum=2.639;VQSLOD=1.5002;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:27:39.13:0,39,2194	0/0:8,0:8:21.07:0,21,2689	0/0:11,0:2:3.01:0,3,195	0/1:16,0:5:4.73:5,0,152	0/0:15,0:15:33.11:0,33,4109	0/0:17,0:28:36.12:0,36,3686	0/0:22,0:22:51.18:0,51,4743	0/1:25,0:24:2.69:22,0,3	0/0:15,0:15:30.10:0,30,3869	0/0:7,0:18:42.14:0,42,2771	0/0:8,0:15:27.09:0,27,1477	0/0:6,0:19:21.96:0,22,2522	0/0:18,0:18:29.93:0,30,3223	0/0:9,0:16:30.10:0,30,3377	0/0:12,0:20:36.12:0,36,1816	0/0:8,0:20:39.11:0,39,2016	0/0:24,0:23:43.79:0,44,5063	0/0:13,0:17:24.53:0,25,1280	1/1:11,9:20:26.86:497,27,0	1/1:10,20:30:24.08:2085,24,0	0/1:10,0:8:0:0,0,0	0/0:12,0:21:11.63:0,12,1784	0/0:12,0:20:20.90:0,21,2094	0/0:18,0:22:50.58:0,51,6945	0/0:10,0:23:36.12:0,36,1957	1/1:17,17:33:0.63:2445,1,0	1/1:18,26:43:42.14:3653,42,0	1/1:6,8:14:6.02:522,6,0
chr10	41993430	.	A	AGAAAGATACGGTACATGTGCATGT	13593.45	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=9.698;DP=540;FS=9.991;HRun=0;HaplotypeScore=324.8982;InbreedingCoeff=0.9168;MQ=75.21;MQ0=0;MQRankSum=-12.940;QD=152.74;ReadPosRankSum=-4.447;VQSLOD=3.0076;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:63.19:0,63,3400	0/0:12,0:12:33.11:0,33,2045	0/0:21,0:18:49.04:0,49,2174	0/0:29,0:25:1.34:0,1,1874	0/0:25,0:25:69.24:0,69,3901	0/0:28,0:26:81.26:0,81,4396	0/0:16,0:16:45.15:0,45,2785	1/1:26,0:25:72.25:5076,72,0	0/0:13,0:13:36.11:0,36,1948	0/0:32,0:32:96.32:0,96,5008	0/0:23,0:23:66.21:0,66,3902	0/0:15,0:15:45.14:0,45,2383	0/0:13,0:13:39.13:0,39,2463	0/0:16,0:16:45.15:0,45,2968	0/0:22,0:22:63.22:0,63,3794	0/0:19,0:19:54.19:0,54,3147	0/0:32,0:32:94.21:0,94,5722	0/0:26,0:26:72.25:0,72,4039	1/1:6,1:8:24.08:1522,24,0	1/1:23,6:29:71.94:3454,72,0	0/1:6,0:6:0.04:1,0,0	0/0:21,0:21:63.22:0,63,3441	0/0:17,0:17:48.15:0,48,2577	0/0:11,0:11:24.08:0,24,1583	0/0:38,0:38:99:0,114,6501	1/1:3,2:6:15.05:1319,15,0	1/1:7,1:9:24.08:1623,24,0	1/1:5,0:5:14.97:599,15,0
chr10	41993605	.	AAGAC	A	6552.70	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=15.316;DP=655;FS=18.612;HRun=0;HaplotypeScore=113.1617;InbreedingCoeff=0.9992;MQ=84.34;MQ0=0;MQRankSum=-5.654;QD=46.47;ReadPosRankSum=-0.434;VQSLOD=4.1604;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:75.22:0,75,1882	0/0:15,0:15:39.13:0,39,1003	0/0:27,0:27:69.22:0,69,1649	0/0:15,0:15:37.36:0,37,776	0/0:34,0:34:99:0,99,2531	0/0:26,0:26:75.26:0,75,1892	0/0:17,0:17:48.15:0,48,1159	1/1:1,29:30:87.28:1520,87,0	0/0:21,0:21:60.21:0,60,1515	0/0:39,0:39:99:0,111,2814	0/0:21,0:21:54.17:0,54,1345	0/0:18,0:18:48.15:0,48,1159	0/0:29,0:29:81.28:0,81,2065	0/0:23,0:23:69.24:0,69,1784	0/0:35,0:35:93.32:0,93,2311	0/0:23,0:23:69.24:0,69,1775	0/0:18,0:18:48.16:0,48,1226	0/0:29,0:29:81.25:0,81,2032	1/1:2,16:18:48.15:795,48,0	1/1:0,25:25:66.23:1159,66,0	1/1:1,18:19:45.15:778,45,0	0/0:28,0:28:81.28:0,81,2067	0/0:23,0:23:69.24:0,69,1771	0/0:15,0:15:45.15:0,45,1152	0/0:30,0:30:84.29:0,84,2098	1/1:0,21:21:63.22:1130,63,0	1/1:2,15:17:45.15:795,45,0	1/1:2,9:11:21.07:376,21,0
chr10	41994128	.	TG	T	250.18	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-4.687;DP=610;FS=0.000;HRun=11;HaplotypeScore=179.6951;InbreedingCoeff=0.7838;MQ=73.08;MQ0=1;MQRankSum=2.666;QD=10.42;ReadPosRankSum=-1.512;VQSLOD=0.7477;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:41:68.18:0,68,301	0/0:2,0:2:3.01:0,3,32	0/0:40,0:35:18.44:0,18,304	0/0:13,0:11:11.25:0,11,102	0/0:21,0:21:21.26:0,21,100	0/0:18,0:18:30.19:0,30,134	0/0:25,0:25:49.46:0,49,220	0/0:16,0:16:22.58:0,23,104	0/0:20,0:20:38.34:0,38,168	0/0:29,0:29:54.82:0,55,235	0/0:19,0:19:34.74:0,35,142	0/0:16,0:16:32.93:0,33,146	0/0:19,0:19:35.73:0,36,159	0/0:20,0:20:35.54:0,36,159	0/0:36,0:36:81.46:0,81,344	0/0:34,0:34:65.80:0,66,292	1/1:3,21:24:41.95:345,42,0	0/0:21,0:21:45.53:0,46,186	0/0:11,0:11:16.31:0,16,71	0/0:20,0:20:35.58:0,36,156	0/0:21,0:21:13.13:0,13,60	0/0:26,0:26:43.91:0,44,195	0/0:23,0:23:45.81:0,46,205	0/0:15,0:15:22.30:0,22,105	0/0:23,0:23:50.95:0,51,208	0/0:16,0:16:36.02:0,36,157	0/0:28,0:27:62.97:0,63,276	0/0:11,0:11:19.15:0,19,85
chr10	41994137	.	G	GGAA	21083.68	PASS	AB=1.000;AC=49;AF=0.875;AN=56;BaseQRankSum=-2.406;DP=600;FS=10.610;HRun=0;HaplotypeScore=137.0891;InbreedingCoeff=0.7771;MQ=73.14;MQ0=1;MQRankSum=-7.607;QD=39.78;ReadPosRankSum=4.070;VQSLOD=6.0710;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,31:35:83.93:1589,84,0	0/0:2,0:2:3.01:0,3,49	0/0:42,0:37:91.70:0,92,1200	0/1:14,0:11:15.95:16,0,240	1/1:3,14:18:42.11:751,42,0	1/1:2,12:14:39.09:761,39,0	1/1:3,25:29:63.19:1270,63,0	1/1:1,17:23:63.09:1033,63,0	1/1:1,13:16:42.13:869,42,0	1/1:2,0:28:79.31:767,79,0	1/1:1,0:16:42.05:402,42,0	1/1:2,14:16:39.13:803,39,0	1/1:2,12:16:42.13:866,42,0	1/1:1,13:18:42.14:835,42,0	1/1:1,0:36:99:924,99,0	1/1:4,29:34:81.25:1627,81,0	0/0:26,0:26:56.95:0,57,609	1/1:0,0:20:51.07:499,51,0	1/1:8,4:13:33.97:499,34,0	1/1:2,17:24:60.05:948,60,0	1/1:7,9:19:39.04:592,39,0	1/1:3,21:25:57.09:1097,57,0	1/1:1,19:24:54.15:1050,54,0	1/1:1,12:14:30.10:590,30,0	1/1:1,0:22:57.06:532,57,0	1/1:4,13:20:57.10:990,57,0	1/1:4,17:25:72.18:1348,72,0	1/1:1,7:9:24.03:427,24,0
chr10	41994190	.	C	CT	3113.23	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=7.031;DP=542;FS=0.866;HRun=8;HaplotypeScore=115.9209;InbreedingCoeff=0.9743;MQ=71.14;MQ0=0;MQRankSum=-10.308;QD=24.91;ReadPosRankSum=-3.690;VQSLOD=1.5028;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:25:50.95:0,51,457	0/0:5,0:5:15.01:0,15,137	0/0:15,0:15:37.22:0,37,318	0/0:14,0:14:15.75:0,16,159	0/0:26,0:26:65.98:0,66,595	0/0:15,0:15:39:0,39,352	0/0:20,0:20:30.01:0,30,275	1/1:6,15:21:54.14:601,54,0	0/0:17,0:17:44.99:0,45,404	0/0:25,0:25:66.02:0,66,602	0/0:20,0:20:57.02:0,57,516	0/0:13,0:13:30:0,30,269	0/0:20,0:20:48.02:0,48,439	0/0:15,0:15:30:0,30,271	0/0:36,0:36:90.02:0,90,818	0/0:27,0:27:63.03:0,63,577	0/0:22,0:22:60.03:0,60,549	0/0:23,0:23:54.02:0,54,494	1/1:4,13:18:50.97:557,51,0	1/1:8,16:24:51.04:554,51,0	1/1:3,4:7:6.02:69,6,0	0/0:24,0:24:57:0,57,518	0/0:17,0:17:42.02:0,42,382	0/0:15,0:15:35.97:0,36,321	0/0:22,0:22:60.03:0,60,549	1/1:3,21:24:41.74:733,42,0	1/1:5,15:20:48.14:552,48,0	1/1:4,7:11:21.06:242,21,0
chr10	41994213	.	CA	C	2915.20	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=13.764;DP=543;FS=12.106;HRun=7;HaplotypeScore=97.2388;InbreedingCoeff=0.9760;MQ=68.59;MQ0=0;MQRankSum=-8.837;QD=23.90;ReadPosRankSum=-3.792;VQSLOD=1.5254;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:63.18:0,63,771	0/0:6,0:6:18.06:0,18,226	0/0:14,0:14:10.80:0,11,311	0/0:13,0:14:7.99:0,8,254	0/0:24,0:24:66.21:0,66,830	0/0:19,0:19:54.13:0,54,662	0/0:12,0:12:33.11:0,33,415	1/1:3,18:21:54.12:550,54,0	0/0:18,0:18:54.13:0,54,661	0/0:24,0:24:66.21:0,66,830	0/0:22,0:22:57.18:0,57,717	0/0:15,0:15:36.12:0,36,452	0/0:24,0:24:69.22:0,69,866	0/0:17,0:17:39.12:0,39,490	0/0:29,0:29:69.22:0,69,868	0/0:28,0:28:72.20:0,72,888	0/0:28,0:28:72.22:0,72,893	0/0:16,0:16:39.12:0,39,489	1/1:4,11:15:36.07:365,36,0	1/1:0,16:16:42.09:428,42,0	1/1:0,12:12:27.06:275,27,0	0/0:25,0:25:60.19:0,60,753	0/0:16,0:16:42.12:0,42,517	0/0:16,0:16:42.13:0,42,528	0/0:29,0:29:78.25:0,78,981	1/1:3,25:28:16.97:700,17,0	1/1:4,17:21:51.11:520,51,0	1/1:0,9:9:27.06:274,27,0
chr10	41994943	.	T	TTTCTTGTCA	21515.25	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-4.253;DP=784;FS=1.010;HRun=0;HaplotypeScore=207.9741;InbreedingCoeff=0.9993;MQ=78.41;MQ0=0;MQRankSum=-17.270;QD=109.21;ReadPosRankSum=-3.174;VQSLOD=4.6089;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,102,2994	0/0:11,0:11:33.11:0,33,934	0/0:33,0:33:81.27:0,81,2192	0/0:25,0:25:57.20:0,57,1633	0/0:37,0:37:99:0,108,3084	0/0:36,0:36:96.30:0,96,2631	0/0:26,0:26:69.18:0,69,1811	1/1:20,10:34:93.29:3733,93,0	0/0:23,0:23:63.22:0,63,1861	0/0:33,0:33:93.31:0,93,2559	0/0:23,0:23:54.19:0,54,1594	0/0:26,0:26:72.25:0,72,2135	0/0:39,0:39:99:0,111,3249	0/0:30,0:30:87.28:0,87,2468	0/0:33,0:33:96.33:0,96,2827	0/0:34,0:34:99:0,99,2807	0/0:21,0:21:57.18:0,57,1613	0/0:14,0:14:33.11:0,33,947	1/1:12,11:27:72.25:2922,72,0	1/1:10,20:32:84.25:3571,84,0	1/1:10,10:21:48.16:1929,48,0	0/0:29,0:29:75.26:0,75,2264	0/0:18,0:18:54.18:0,54,1477	0/0:32,0:32:93.27:0,93,2558	0/0:29,0:29:84.29:0,84,2505	1/1:9,27:40:23.41:4760,23,0	1/1:12,19:33:81.28:3473,81,0	1/1:2,7:10:27.09:1128,27,0
chr10	41997129	.	TG	T	5534.38	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=8.119;DP=541;FS=2.155;HRun=1;HaplotypeScore=67.7627;InbreedingCoeff=0.9994;MQ=92.46;MQ0=0;MQRankSum=-5.984;QD=40.69;ReadPosRankSum=-1.394;VQSLOD=4.9263;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:69.19:0,69,1071	0/0:11,0:11:30.10:0,30,480	0/0:30,0:30:87.29:0,87,1366	0/0:22,0:22:63.21:0,63,972	0/0:18,0:18:54.17:0,54,838	0/0:23,0:23:62.97:0,63,1005	0/0:15,0:15:45.15:0,45,719	1/1:0,28:28:84.28:1174,84,0	0/0:20,0:20:60.20:0,60,959	0/0:11,0:11:33.10:0,33,504	0/0:21,0:21:63.20:0,63,984	0/0:20,0:20:57.17:0,57,859	0/0:16,0:16:48.16:0,48,754	0/0:34,0:34:99:0,102,1630	0/0:19,0:19:57.19:0,57,901	0/0:14,0:14:42.14:0,42,669	0/0:22,0:22:66.18:0,66,1024	0/0:15,0:15:45.12:0,45,690	1/1:0,27:27:81.25:1107,81,0	1/1:0,19:19:54.18:755,54,0	1/1:0,9:9:24.08:336,24,0	0/0:14,0:14:39.11:0,39,578	0/0:13,0:13:39.10:0,39,596	0/0:26,0:26:77.71:0,78,1174	0/0:18,0:18:44.83:0,45,713	1/1:0,16:16:45.13:610,45,0	1/1:0,27:27:81.27:1132,81,0	1/1:0,10:10:30.10:419,30,0
chr10	41997683	.	GA	G	3084.81	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=9.793;DP=554;FS=5.295;HRun=9;HaplotypeScore=59.7892;InbreedingCoeff=0.9260;MQ=75.42;MQ0=0;MQRankSum=-0.258;QD=22.19;ReadPosRankSum=0.069;VQSLOD=4.3635;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:75.20:0,75,848	0/0:10,1:11:2.63:0,3,284	0/0:14,0:14:27.02:0,27,275	0/0:11,1:11:2.07:0,2,226	0/0:26,0:26:75.21:0,75,855	0/0:21,1:22:38.72:0,39,690	0/0:19,0:19:45.10:0,45,492	1/1:8,26:34:78:707,78,0	0/0:28,0:28:75.21:0,75,855	0/0:17,0:17:51.14:0,51,577	0/0:20,0:20:57.17:0,57,658	0/0:13,0:13:30.09:0,30,346	0/0:23,1:24:35.72:0,36,665	0/0:20,0:20:54.16:0,54,623	0/0:18,0:18:45.12:0,45,510	0/0:15,1:16:14.65:0,15,414	0/0:27,2:29:17.26:0,17,695	0/0:9,0:9:21.06:0,21,242	1/1:1,9:10:26.99:237,27,0	1/1:3,21:24:41.47:552,41,0	1/1:2,19:21:57.03:522,57,0	0/0:14,0:15:41.96:0,42,465	0/0:21,1:22:26.73:0,27,541	0/0:24,0:24:66.20:0,66,761	0/0:29,1:30:56.77:0,57,891	1/1:0,14:14:39.01:357,39,0	1/1:2,25:27:72.04:659,72,0	1/1:0,9:9:27.01:247,27,0
chr10	41998084	.	G	GCACA	3861.16	PASS	AB=0.902;AC=44;AF=0.846;AN=52;BaseQRankSum=-0.053;DP=591;FS=2.410;HRun=0;HaplotypeScore=148.3115;InbreedingCoeff=0.1815;MQ=58.42;MQ0=34;MQRankSum=-1.795;QD=8.74;ReadPosRankSum=-2.832;VQSLOD=2.5462;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:15,2:29:9.03:163,9,0	0/0:9,0:9:21.06:0,21,306	./.	./.	0/1:16,0:16:5.71:6,0,7	0/1:24,0:23:4:55,0,4	1/1:19,0:18:6.75:50,7,0	1/1:29,0:27:26.98:177,27,0	1/1:10,0:10:12.03:201,12,0	0/1:6,9:17:11.77:622,0,12	1/1:3,5:9:3.01:72,3,0	1/1:17,0:17:5.91:102,6,0	1/1:11,0:11:13.20:139,13,0	1/1:16,0:14:13.76:156,14,0	1/1:9,10:19:17.46:310,17,0	1/1:5,0:14:6:103,6,0	1/1:29,0:28:9.38:43,9,0	1/1:12,10:22:9.74:518,10,0	1/1:20,0:18:28.54:200,29,0	1/1:15,0:15:5.88:67,6,0	0/0:22,0:17:0.48:0,0,2	1/1:8,0:8:5.71:63,6,0	1/1:14,0:13:3.01:38,3,0	0/1:31,0:27:28.29:94,0,28	1/1:13,10:26:14.54:244,15,0	1/1:18,0:17:1.52:120,2,0	1/1:19,0:19:15.68:165,16,0	1/1:9,0:9:15:152,15,0
chr10	41998110	.	A	AC	1682.18	PASS	AB=0.681;AC=17;AF=0.304;AN=56;BaseQRankSum=-1.836;DP=627;FS=23.341;HRun=1;HaplotypeScore=111.7818;InbreedingCoeff=-0.1050;MQ=43.80;MQ0=79;MQRankSum=-1.597;QD=6.52;ReadPosRankSum=0.474;VQSLOD=-0.6685;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:38.14:0,38,440	0/0:16,0:15:42.11:0,42,524	0/0:53,0:7:18.92:0,19,214	0/0:64,0:7:15.03:0,15,176	0/1:4,3:20:5.59:6,0,30	0/1:14,9:21:99:120,0,267	0/1:14,11:19:65.28:65,0,184	0/1:18,13:25:99:291,0,319	1/1:4,4:8:9.92:110,10,0	0/0:19,0:16:34.41:0,34,310	0/0:12,0:12:18.94:0,19,231	0/1:10,4:12:99:100,0,153	0/1:2,7:7:23.79:153,0,24	0/1:5,13:17:8.66:262,0,9	0/0:19,0:19:11.69:0,12,90	0/0:15,0:14:12.18:0,12,138	0/0:34,0:33:61.70:0,62,721	0/0:23,0:22:25.87:0,26,213	0/1:17,9:20:99:106,0,371	0/1:8,5:10:16.73:36,0,17	0/0:30,4:22:9.30:0,9,95	0/1:4,4:8:27.74:38,0,28	0/0:10,9:17:11.42:0,11,132	0/1:17,7:18:90.50:112,0,90	0/0:28,0:28:39.36:0,39,446	0/1:10,6:15:99:167,0,247	0/1:4,5:7:99:109,0,105	1/1:3,7:7:12.04:175,12,0
chr10	41998695	.	AG	A	5066.35	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=12.451;DP=785;FS=4.268;HRun=2;HaplotypeScore=74.0814;InbreedingCoeff=0.9979;MQ=88.90;MQ0=0;MQRankSum=-0.873;QD=39.58;ReadPosRankSum=3.037;VQSLOD=5.4660;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:84.29:0,84,1343	0/0:6,0:6:18.05:0,18,265	0/0:35,0:35:98.99:0,99,1443	0/0:24,0:24:69.14:0,69,990	0/0:25,0:25:72.25:0,72,1149	0/0:24,0:24:72.25:0,72,1151	0/0:26,0:26:78.27:0,78,1245	0/0:35,0:34:99:0,102,1587	0/0:32,0:32:96.27:0,96,1459	1/1:1,27:28:84.28:1165,84,0	1/1:0,21:21:60.20:839,60,0	0/0:29,0:29:87.30:0,87,1389	0/0:35,0:35:99:0,102,1630	0/0:34,0:34:99:0,102,1631	1/1:0,35:35:99:1384,99,0	0/0:35,0:35:99:0,102,1608	0/0:31,0:31:81.24:0,81,1264	1/1:0,13:13:33.11:461,33,0	0/0:27,0:27:78.25:0,78,1204	0/0:38,0:38:99:0,114,1822	0/0:32,0:32:96.33:0,96,1535	0/0:31,0:31:90.29:0,90,1413	0/0:24,0:24:69.24:0,69,1100	0/0:19,0:19:57.17:0,57,883	1/1:0,31:31:87.29:1217,87,0	0/0:28,1:29:45.32:0,45,1281	0/0:47,0:46:99:0,138,2196	0/0:10,0:10:30.10:0,30,479
chr10	41999620	.	GA	G	4177.55	PASS	AB=1.000;AC=25;AF=0.446;AN=56;BaseQRankSum=3.973;DP=576;FS=2.986;HRun=11;HaplotypeScore=78.9022;InbreedingCoeff=0.9234;MQ=68.77;MQ0=2;MQRankSum=-1.564;QD=14.71;ReadPosRankSum=-0.904;VQSLOD=3.9856;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,31:35:83.89:690,84,0	0/0:10,0:10:27.06:0,27,281	0/1:15,0:10:3.64:4,0,82	0/0:16,0:11:15.78:0,16,174	1/1:3,25:28:41.83:543,42,0	0/0:10,0:10:27.07:0,27,288	0/0:25,0:25:66.17:0,66,703	1/1:32,0:32:6.85:328,7,0	1/1:4,16:20:35.96:296,36,0	0/0:9,0:27:51.92:0,52,303	0/0:4,0:18:33.19:0,33,180	0/0:13,0:14:29.90:0,30,295	0/0:16,0:16:39.06:0,39,403	0/0:9,0:9:21.05:0,21,224	0/0:6,0:28:52.74:0,53,271	1/1:2,14:16:41.94:345,42,0	1/1:4,16:20:41.94:345,42,0	0/0:3,0:13:34.42:0,34,206	1/1:23,1:24:51.27:406,51,0	1/1:27,0:27:64.29:395,64,0	1/1:13,0:13:28.78:173,29,0	0/0:25,1:26:41.51:0,42,639	0/0:20,0:20:48.11:0,48,505	0/0:25,2:27:41.47:0,41,638	0/0:3,0:33:82.93:0,83,457	1/1:23,0:23:34.01:350,34,0	1/1:24,1:25:20.34:267,20,0	1/1:6,0:6:8.08:37,8,0
chr10	42000319	.	C	CAA	6473.55	PASS	AB=0.542;AC=29;AF=0.518;AN=56;BaseQRankSum=-6.743;DP=515;FS=0.794;HRun=10;HaplotypeScore=69.7541;InbreedingCoeff=0.8801;MQ=66.64;MQ0=3;MQRankSum=1.286;QD=25.29;ReadPosRankSum=-2.744;VQSLOD=4.1276;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:78.12:0,78,786	0/0:12,0:12:30:0,30,288	0/0:14,0:10:1.32:0,1,107	0/0:9,0:6:9.57:0,10,74	0/0:30,0:33:82.44:0,82,840	1/1:2,20:22:54.18:805,54,0	1/1:1,1:7:12.99:80,13,0	1/1:11,25:37:72.78:829,73,0	0/0:14,0:14:36.03:0,36,355	0/0:22,0:22:45.07:0,45,457	0/0:22,0:22:54.01:0,54,534	0/1:2,11:13:12.48:206,0,12	1/1:1,9:10:15.05:224,15,0	1/1:3,13:16:18.06:269,18,0	0/0:19,0:19:48.05:0,48,481	0/0:13,0:13:24.02:0,24,244	0/0:28,0:28:56.74:0,57,612	0/0:15,0:15:23.94:0,24,233	1/1:3,12:16:39.09:541,39,0	1/1:2,19:22:53.46:646,53,0	1/1:0,11:11:18.06:268,18,0	1/1:2,9:11:28.82:357,29,0	1/1:4,9:16:22.78:261,23,0	1/1:1,9:12:23.94:325,24,0	0/0:26,0:27:53.79:0,54,601	1/1:4,22:26:35.62:791,36,0	1/1:4,19:23:11.18:515,11,0	1/1:3,10:13:24.08:358,24,0
chr10	42001114	.	G	GCA	2592.89	PASS	AB=0.795;AC=10;AF=0.185;AN=54;BaseQRankSum=-9.503;DP=721;FS=1.723;HRun=0;HaplotypeScore=160.6864;InbreedingCoeff=0.0306;MQ=58.32;MQ0=19;MQRankSum=3.807;QD=10.05;ReadPosRankSum=1.156;VQSLOD=3.3475;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:24:8.52:0,9,42	0/0:18,0:21:32.75:0,33,323	./.	0/0:25,0:6:2.80:0,3,13	0/1:12,0:33:0.01:0,0,0	0/1:14,9:23:14.88:207,0,15	0/1:20,9:30:99:287,0,220	0/0:29,0:27:5.95:0,6,36	0/0:17,0:41:52.26:0,52,246	0/0:12,0:27:27.66:0,28,135	0/0:0,0:8:3.55:0,4,15	0/1:14,7:23:58.95:158,0,59	1/1:18,18:37:36.78:666,37,0	0/1:17,12:28:26.55:450,0,27	0/0:16,0:34:36.93:0,37,181	0/0:15,0:39:57.29:0,57,281	0/0:23,0:25:10.98:0,11,364	0/0:7,0:10:2.84:0,3,14	0/0:12,0:13:2.12:0,2,13	0/0:9,0:20:23.76:0,24,123	0/0:24,0:39:25.40:0,25,125	0/1:21,12:34:23.21:454,0,23	0/1:8,0:9:31.81:82,0,32	0/1:21,16:38:78.95:428,0,79	0/0:15,0:37:37.87:0,38,183	0/0:13,0:20:19.17:0,19,97	0/0:7,0:20:28.38:0,28,140	0/0:2,0:8:20.05:0,20,117
chr10	42002869	.	ATCTCTC	A	612.18	PASS	AB=1.000;AC=14;AF=0.350;AN=40;BaseQRankSum=1.093;DP=515;FS=11.937;HRun=0;HaplotypeScore=105.0604;InbreedingCoeff=0.3762;MQ=60.56;MQ0=37;MQRankSum=2.706;QD=3.92;ReadPosRankSum=1.248;VQSLOD=1.3654;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:26:6.02:0,6,94	0/0:8,0:8:3.01:0,3,58	./.	./.	1/1:25,0:23:9.01:132,9,0	0/1:16,0:16:0.05:0,0,0	1/1:12,0:9:3.01:60,3,0	0/0:37,0:34:9.02:0,9,143	./.	0/0:17,0:16:14.07:0,14,272	./.	1/1:14,0:11:3.01:54,3,0	1/1:16,0:15:6.02:105,6,0	1/1:18,0:18:12.04:206,12,0	0/0:17,0:16:6.01:0,6,101	0/0:19,0:17:8.70:0,9,162	0/0:16,0:11:3.01:0,3,48	0/0:14,0:12:21.03:0,21,315	0/0:27,0:23:18.06:0,18,418	./.	0/1:20,0:17:52.50:53,0,143	./.	./.	0/1:18,0:15:6.42:98,0,6	0/0:25,0:24:5.97:0,6,89	0/1:16,0:14:39.82:40,0,201	0/0:19,0:18:12.04:0,12,188	./.
chr10	42002919	.	CTGTGTGTGTGTGTG	C	243.53	PASS	AB=0.884;AC=5;AF=0.132;AN=38;BaseQRankSum=1.892;DP=433;FS=10.855;HRun=0;HaplotypeScore=115.7196;InbreedingCoeff=0.1483;MQ=29.78;MQ0=87;MQRankSum=0.280;QD=3.48;ReadPosRankSum=-0.839;VQSLOD=1.6692;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	0/0:7,0:6:3.01:0,3,114	./.	./.	0/0:14,9:19:2.60:0,3,25	0/0:28,0:27:6.02:0,6,240	0/0:19,0:10:2.24:0,2,4	0/0:22,0:17:8.91:0,9,71	1/1:6,10:14:8.98:208,9,0	0/0:10,0:10:14.40:0,14,358	./.	0/0:15,0:12:2.97:0,3,20	0/0:10,0:10:3.11:0,3,116	0/0:12,0:12:6.44:0,6,122	./.	0/0:15,0:13:3.91:0,4,60	0/0:15,0:6:0:0,0,0	./.	0/1:14,0:14:45.37:110,0,45	./.	0/0:22,0:16:2.98:0,3,22	0/1:21,0:19:0:0,0,0	./.	./.	0/0:16,0:16:2.62:0,3,24	0/1:12,0:11:20.26:20,0,130	0/0:13,0:10:8.91:0,9,93	0/0:12,0:4:1.55:0,2,4
chr10	42004479	.	GATGTTTACATGA	G	10303.07	PASS	AB=0.647;AC=33;AF=0.611;AN=54;BaseQRankSum=9.977;DP=403;FS=4.977;HRun=0;HaplotypeScore=170.5661;InbreedingCoeff=0.8437;MQ=77.30;MQ0=3;MQRankSum=-12.394;QD=47.26;ReadPosRankSum=0.313;VQSLOD=4.5223;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:51.17:0,51,2651	0/0:4,0:4:12.04:0,12,644	0/0:32,0:25:72.12:0,72,3372	0/0:35,0:19:51.17:0,51,2246	0/0:4,3:7:0.47:0,0,1	1/1:14,0:14:35.73:730,36,0	1/1:12,0:12:26.91:435,27,0	1/1:9,14:23:46.37:1512,46,0	1/1:11,4:15:30.10:1112,30,0	0/0:15,0:15:45.15:0,45,2206	0/0:12,0:12:30.10:0,30,1600	1/1:16,0:16:26.01:713,26,0	1/1:10,0:10:26.84:605,27,0	1/1:17,0:17:38.85:569,39,0	0/0:22,0:22:63.20:0,63,3246	1/1:12,9:21:27.09:1026,27,0	1/1:11,0:11:18.03:358,18,0	0/0:14,0:14:33.11:0,33,1657	1/1:1,4:5:8.06:203,8,0	1/1:8,9:17:26.99:658,27,0	./.	1/1:6,0:6:14.24:153,14,0	1/1:11,0:11:23.13:275,23,0	1/1:8,0:8:11.97:167,12,0	0/0:19,0:19:54.19:0,54,2776	0/1:5,6:11:99:940,0,154	1/1:11,9:20:24.08:734,24,0	1/1:0,1:1:3.01:114,3,0
chr10	42004480	.	AT	A	2414.32	PASS	AB=0.769;AC=33;AF=0.635;AN=52;BaseQRankSum=13.432;DP=368;FS=6.740;HRun=1;HaplotypeScore=125.5988;InbreedingCoeff=0.8591;MQ=79.15;MQ0=3;MQRankSum=-12.035;QD=12.98;ReadPosRankSum=0.228;VQSLOD=2.3768;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:51.16:0,51,786	0/0:4,0:4:12.04:0,12,187	0/0:31,0:24:58.94:0,59,994	0/0:34,1:19:49.41:0,49,771	./.	1/1:2,5:12:35.58:247,36,0	1/1:2,4:9:26.69:181,27,0	1/1:14,2:17:41.15:262,41,0	1/1:4,0:15:29.32:177,29,0	0/0:15,0:15:45.10:0,45,670	0/0:12,0:12:30.10:0,30,479	1/1:2,10:15:36.75:255,37,0	1/1:0,5:9:26.68:179,27,0	1/1:0,13:15:38.09:238,38,0	0/0:22,0:22:63.20:0,63,981	1/1:9,0:17:26.30:151,26,0	1/1:1,3:6:17.81:121,18,0	0/0:14,0:14:33.11:0,33,521	1/1:4,0:4:5.82:33,6,0	1/1:9,8:17:22.99:149,23,0	./.	1/1:0,3:5:14.83:101,15,0	1/1:0,6:9:23.63:153,24,0	1/1:0,4:7:11.83:76,12,0	0/0:19,0:19:54.18:0,54,861	0/1:7,2:10:18.89:136,0,19	1/1:9,7:18:22.70:143,23,0	1/1:1,0:1:2.92:17,3,0
chr10	42004482	.	GTTT	G	2972.40	PASS	AB=0.833;AC=34;AF=0.630;AN=54;BaseQRankSum=13.900;DP=364;FS=3.502;HRun=3;HaplotypeScore=132.7181;InbreedingCoeff=0.8383;MQ=78.16;MQ0=3;MQRankSum=-12.556;QD=15.81;ReadPosRankSum=0.620;VQSLOD=0.3723;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:51.09:0,51,1196	0/0:4,0:4:12.04:0,12,296	0/0:30,0:23:68.97:0,69,1544	0/0:38,0:19:49.41:0,49,1138	0/1:4,0:5:0:0,0,0	1/1:6,5:11:32.82:267,33,0	1/1:4,4:8:23.85:197,24,0	1/1:15,0:17:41.08:283,41,0	1/1:15,0:15:29.80:216,30,0	0/0:14,0:14:42.14:0,42,1017	0/0:12,0:12:30.10:0,30,724	1/1:4,10:14:41.14:317,41,0	1/1:4,5:9:26.88:220,27,0	1/1:2,13:15:38.75:325,39,0	0/0:23,0:23:66.21:0,66,1532	1/1:17,0:17:26.81:193,27,0	1/1:3,3:6:17.92:150,18,0	0/0:14,0:14:33.11:0,33,813	1/1:4,0:4:5.93:40,6,0	1/1:9,0:17:23.33:156,23,0	./.	1/1:2,3:5:14.96:148,15,0	1/1:3,6:9:23.89:212,24,0	1/1:3,4:7:11.94:102,12,0	0/0:19,0:19:54.14:0,54,1276	0/1:8,0:10:44.18:162,0,44	1/1:11,0:18:23.81:168,24,0	1/1:1,0:1:2.98:21,3,0
chr10	42004486	.	ACATG	A	3115.78	PASS	AB=1.000;AC=35;AF=0.648;AN=54;BaseQRankSum=13.513;DP=364;FS=3.002;HRun=0;HaplotypeScore=136.7510;InbreedingCoeff=0.8074;MQ=74.64;MQ0=4;MQRankSum=-12.031;QD=16.66;ReadPosRankSum=0.863;VQSLOD=3.6244;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:42.52:0,43,1193	0/0:4,0:4:12.04:0,12,315	0/0:28,0:21:58:0,58,1381	0/0:38,0:18:40.04:0,40,817	1/1:5,0:5:0.47:1,0,0	1/1:6,2:11:23.57:267,24,0	1/1:3,2:7:11.69:130,12,0	1/1:17,0:17:21.14:359,21,0	1/1:15,0:15:30.05:292,30,0	0/0:14,0:14:42.14:0,42,989	0/0:13,0:13:30.07:0,30,748	1/1:4,7:14:11.97:259,12,0	1/1:4,2:9:21.08:257,21,0	1/1:2,9:15:20.31:214,20,0	0/0:22,0:22:63.20:0,63,1545	1/1:17,0:17:27.04:260,27,0	1/1:2,1:5:12.92:162,13,0	0/0:14,0:14:33.06:0,33,666	1/1:4,0:4:3.95:30,4,0	1/1:17,0:17:26.22:232,26,0	./.	1/1:3,0:5:10.80:124,11,0	1/1:3,2:9:14.69:155,15,0	1/1:3,2:7:7.78:72,8,0	0/0:20,0:20:53.89:0,54,1273	0/1:11,0:11:54.36:244,0,54	1/1:18,0:18:24.04:233,24,0	1/1:1,0:1:3:29,3,0
chr10	42004490	.	GA	G	1321.70	PASS	AB=1.000;AC=32;AF=0.593;AN=54;BaseQRankSum=11.484;DP=393;FS=2.900;HRun=2;HaplotypeScore=141.9110;InbreedingCoeff=0.6813;MQ=68.69;MQ0=5;MQRankSum=-8.916;QD=6.26;ReadPosRankSum=1.164;VQSLOD=0.8908;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:46.61:0,47,404	0/0:4,0:4:8.39:0,8,93	0/0:29,0:20:50.32:0,50,609	0/0:36,0:15:3.10:0,3,323	0/0:5,0:5:0.89:0,1,2	1/1:16,0:16:23.87:108,24,0	1/1:11,0:11:8.48:27,8,0	1/1:17,0:17:23.22:220,23,0	1/1:15,0:15:29.34:177,29,0	0/0:15,0:15:35.94:0,36,298	0/0:14,0:14:21.45:0,21,174	1/1:15,0:15:7.44:46,7,0	0/1:10,0:10:5:27,0,5	1/1:16,0:16:12.79:42,13,0	0/0:20,1:21:36.64:0,37,423	1/1:18,0:18:24.32:147,24,0	1/1:6,1:7:0.07:36,0,0	0/0:13,0:13:24.99:0,25,146	1/1:5,0:5:5.64:24,6,0	1/1:18,0:18:23.90:155,24,0	./.	1/1:7,0:7:9.46:39,9,0	1/1:9,1:10:11.83:62,12,0	1/1:8,1:9:8.31:50,8,0	0/0:20,0:20:45.25:0,45,315	0/1:18,0:18:10.92:194,0,11	1/1:18,0:18:22.55:142,23,0	1/1:1,0:1:2.92:17,3,0
chr10	42004491	.	A	AG	2590.64	PASS	AB=0.857;AC=34;AF=0.607;AN=56;BaseQRankSum=10.960;DP=438;FS=13.122;HRun=1;HaplotypeScore=160.8389;InbreedingCoeff=0.7846;MQ=66.02;MQ0=5;MQRankSum=-9.386;QD=10.20;ReadPosRankSum=-0.820;VQSLOD=0.2019;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:24:50.89:0,51,501	0/0:2,0:3:9:0,9,104	0/0:29,0:20:50.29:0,50,604	0/0:35,0:15:3.10:0,3,319	0/0:8,1:9:0.12:0,0,1	1/1:14,3:17:30.38:239,30,0	1/1:7,5:12:14.94:142,15,0	1/1:21,1:22:30.34:333,30,0	1/1:7,11:18:35.36:263,35,0	0/0:7,0:15:39.42:0,39,394	0/0:5,0:13:23.93:0,24,229	1/1:14,3:18:24.65:160,25,0	1/1:10,3:13:25.59:175,26,0	1/1:15,4:19:17.31:154,17,0	0/0:11,0:21:54.69:0,55,562	1/1:13,8:21:30.37:189,30,0	1/1:6,1:7:11.74:63,12,0	0/0:3,0:14:29.88:0,30,257	1/1:5,1:6:8.96:108,9,0	1/1:19,1:20:19.12:144,19,0	0/1:4,0:3:0:0,0,0	1/1:8,3:11:26.45:203,26,0	1/1:11,4:14:14.53:103,15,0	1/1:8,1:9:8.61:80,9,0	0/0:9,0:20:50.75:0,51,440	0/1:12,8:20:9.42:338,0,9	1/1:19,2:21:10.33:81,10,0	1/1:1,0:1:2.92:17,3,0
chr10	42004810	.	T	TTTTAC	28562.51	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=2.059;DP=426;FS=0.000;HRun=0;HaplotypeScore=120.2011;InbreedingCoeff=0.8425;MQ=88.62;MQ0=0;MQRankSum=-10.834;QD=77.20;ReadPosRankSum=3.852;VQSLOD=6.3940;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,17:22:54.18:1574,54,0	0/0:7,0:7:21.06:0,21,410	0/0:28,0:28:72.21:0,72,1356	0/0:21,0:21:39.02:0,39,845	1/1:1,1:3:6.02:167,6,0	1/1:4,16:21:57.20:1710,57,0	1/1:4,17:21:60.21:1816,60,0	1/1:12,17:35:96.25:2501,96,0	1/1:3,6:11:24.08:735,24,0	1/1:3,10:13:39.13:1215,39,0	1/1:1,4:5:9.03:281,9,0	1/1:6,17:23:66.23:1980,66,0	1/1:10,10:20:57.20:1619,57,0	1/1:4,20:24:69.24:2143,69,0	1/1:7,17:24:60.19:1795,60,0	1/1:1,12:13:39.13:1217,39,0	1/1:3,13:16:48.16:1492,48,0	1/1:3,8:11:24.08:740,24,0	1/1:3,9:12:33.11:1012,33,0	1/1:3,5:8:18.06:538,18,0	1/1:2,6:9:18.06:538,18,0	1/1:3,3:6:12.04:342,12,0	1/1:5,1:6:6.02:143,6,0	1/1:5,5:10:20.74:542,21,0	1/1:6,15:21:57.20:1617,57,0	1/1:5,10:15:42.14:1247,42,0	1/1:4,16:20:51.17:1576,51,0	1/1:1,0:1:2.99:23,3,0
chr10	42004846	.	TGC	T	1859.37	PASS	AB=0.973;AC=25;AF=0.446;AN=56;BaseQRankSum=-0.871;DP=487;FS=1.411;HRun=0;HaplotypeScore=185.4517;InbreedingCoeff=-0.2211;MQ=65.09;MQ0=5;MQRankSum=-1.443;QD=5.30;ReadPosRankSum=0.999;VQSLOD=3.1259;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,7:19:14.97:140,15,0	0/1:6,0:5:4.43:4,0,209	0/0:33,0:24:65.85:0,66,587	0/0:37,1:24:26.43:0,26,471	0/1:5,0:5:11.56:33,0,12	0/1:17,1:18:47.09:50,0,47	0/0:22,0:22:7.31:0,7,99	0/1:37,0:37:19.08:461,0,19	0/0:14,0:14:14.94:0,15,142	1/1:15,2:17:21.18:257,21,0	0/1:8,3:11:8.96:137,0,9	0/1:24,0:24:19.26:19,0,58	0/1:24,0:23:50.57:51,0,72	0/1:17,0:17:20.97:32,0,21	1/1:24,2:26:3.76:281,4,0	0/1:20,1:21:26.28:26,0,107	0/1:16,0:16:7.92:8,0,145	1/1:10,1:11:7.69:123,8,0	0/1:12,0:12:46.40:120,0,46	0/1:9,0:9:2.56:3,0,69	0/1:14,0:14:29.47:29,0,89	0/0:4,0:4:7:0,7,24	0/1:7,0:7:6.59:13,0,7	0/0:18,0:18:5.69:0,6,31	0/1:18,2:20:32.75:108,0,33	0/1:14,1:15:54.23:116,0,54	0/1:21,0:21:15.30:15,0,200	0/0:7,0:7:17.53:0,18,107
chr10	42004876	.	CA	C	1045.86	PASS	AB=0.973;AC=26;AF=0.464;AN=56;BaseQRankSum=8.984;DP=652;FS=1.508;HRun=2;HaplotypeScore=186.6583;InbreedingCoeff=0.3327;MQ=51.62;MQ0=13;MQRankSum=0.971;QD=2.65;ReadPosRankSum=6.545;VQSLOD=-0.1252;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:19,1:20:5.22:18,5,0	0/0:7,0:6:17.42:0,17,228	0/0:45,0:23:63.20:0,63,817	0/0:52,0:31:91.58:0,92,1131	0/0:13,0:13:5.49:0,5,30	1/1:28,0:28:19.28:205,19,0	1/1:22,2:24:7.78:54,8,0	0/1:33,0:32:13.14:13,0,24	0/1:22,0:22:0.02:33,0,0	0/0:30,0:29:12.56:0,13,79	0/0:22,0:22:7.74:0,8,28	0/1:19,2:21:2.46:48,0,2	0/1:25,3:27:13.29:170,0,13	1/1:19,1:20:18.81:132,19,0	0/0:30,0:29:28.51:0,29,106	1/1:17,0:17:19.26:67,19,0	0/1:25,0:25:0.83:1,0,70	0/0:17,0:17:2.82:0,3,37	0/1:20,1:20:35.87:36,0,82	0/1:15,0:15:2.98:3,0,8	0/1:22,1:23:2.02:17,0,2	1/1:14,0:14:6.29:72,6,0	1/1:12,1:13:20.48:152,20,0	1/1:28,1:29:12.24:171,12,0	0/0:20,0:20:19.75:0,20,61	0/1:31,0:31:19.22:19,0,26	0/0:22,0:22:9.33:0,9,129	0/1:10,0:10:18.49:18,0,31
chr10	42004877	.	AAC	A	10153.17	PASS	AB=0.916;AC=48;AF=0.857;AN=56;BaseQRankSum=1.125;DP=645;FS=10.736;HRun=0;HaplotypeScore=158.5235;InbreedingCoeff=0.4467;MQ=52.52;MQ0=13;MQRankSum=0.473;QD=18.60;ReadPosRankSum=1.526;VQSLOD=4.4374;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:18,2:20:38.84:352,39,0	0/1:7,0:6:3.67:4,0,235	0/0:44,0:23:60.16:0,60,930	0/0:54,0:33:75.10:0,75,1227	1/1:1,12:13:23.83:199,24,0	1/1:19,0:27:51.62:445,52,0	1/1:18,1:23:6.74:234,7,0	1/1:29,4:32:45.53:869,46,0	1/1:19,2:22:18.64:246,19,0	1/1:23,7:29:81.16:999,81,0	1/1:16,6:22:51.09:615,51,0	1/1:12,0:20:6.12:144,6,0	1/1:14,1:26:14.22:236,14,0	1/1:14,0:19:40.15:316,40,0	1/1:15,15:29:74.93:890,75,0	1/1:14,2:16:28.85:194,29,0	1/1:20,3:24:24.82:374,25,0	1/1:8,8:17:45.06:535,45,0	0/1:18,1:18:9.09:259,0,9	1/1:15,1:16:22.49:368,22,0	1/1:23,1:24:42.62:492,43,0	1/1:11,0:14:35.45:363,35,0	1/1:1,5:13:16.75:91,17,0	1/1:16,0:29:38.73:296,39,0	1/1:12,8:20:39.41:559,39,0	1/1:28,1:30:48.52:837,49,0	0/1:21,0:21:77.45:206,0,77	0/1:6,4:10:30.83:31,0,36
chr10	42004879	.	C	CA	3860.44	PASS	AB=0.958;AC=36;AF=0.643;AN=56;BaseQRankSum=-0.915;DP=650;FS=11.200;HRun=2;HaplotypeScore=170.2854;InbreedingCoeff=0.3457;MQ=52.92;MQ0=13;MQRankSum=2.029;QD=8.32;ReadPosRankSum=-1.318;VQSLOD=-0.2770;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:21:15.33:132,15,0	0/0:7,0:6:18.05:0,18,220	0/0:47,0:25:72.21:0,72,919	0/0:53,0:33:91.20:0,91,1116	1/1:12,0:12:6.79:104,7,0	1/1:22,6:28:45.45:414,45,0	1/1:21,3:24:35.81:321,36,0	0/1:35,0:34:10.51:146,0,11	1/1:23,0:23:16:105,16,0	0/0:31,0:30:3.16:0,3,83	0/1:21,0:21:23.65:24,0,57	1/1:10,7:18:16.93:198,17,0	0/1:14,11:26:8.54:375,0,9	1/1:13,5:18:36.77:376,37,0	0/0:29,0:28:18.44:0,18,125	1/1:16,0:16:22.56:132,23,0	1/1:24,1:25:9.03:144,9,0	0/1:16,0:16:25.45:25,0,27	0/1:20,0:19:51.06:51,0,51	1/1:16,0:16:20.40:153,20,0	1/1:25,0:25:14.01:154,14,0	1/1:11,3:14:19.56:223,20,0	1/1:8,6:14:12.75:226,13,0	1/1:18,11:29:10.87:331,11,0	0/0:19,0:19:15.89:0,16,67	0/1:29,1:30:2.36:128,0,2	0/1:22,0:22:32.46:32,0,73	0/1:10,0:10:18.99:63,0,19
chr10	42004886	.	ACT	A	1949.42	PASS	AB=0.993;AC=25;AF=0.446;AN=56;BaseQRankSum=-1.067;DP=659;FS=9.080;HRun=0;HaplotypeScore=176.1815;InbreedingCoeff=-0.3510;MQ=61.42;MQ0=9;MQRankSum=2.052;QD=4.02;ReadPosRankSum=5.243;VQSLOD=1.9871;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:20,0:20:65.79:66,0,67	0/1:7,0:7:19.54:20,0,277	0/0:45,0:28:78.19:0,78,1342	0/0:53,0:37:76.48:0,76,1574	0/1:13,0:13:19.76:20,0,64	0/1:30,0:30:17.88:18,0,152	0/0:23,0:23:2.46:0,2,167	0/1:37,0:36:99:174,0,167	0/1:23,0:23:14.17:14,0,239	0/1:30,1:31:37:260,0,37	1/1:19,2:21:24.26:259,24,0	0/0:21,0:21:10.19:0,10,156	0/1:23,0:23:16.43:16,0,143	0/1:20,0:20:17.22:17,0,63	1/1:28,0:27:19.54:242,20,0	0/1:16,0:16:14.11:14,0,161	0/1:25,0:25:64.42:64,0,185	1/1:17,0:17:11.34:175,11,0	0/1:16,0:15:70.86:71,0,97	0/1:19,0:19:58.88:59,0,148	0/1:27,0:27:99:127,0,99	0/1:14,1:15:36.54:104,0,37	0/0:18,0:18:25.98:0,26,144	0/1:30,0:30:7.02:7,0,147	0/1:17,0:17:0.92:153,0,1	0/1:28,1:29:30.45:216,0,30	0/1:21,0:21:21.20:21,0,340	0/0:13,0:13:27.30:0,27,208
chr10	42005104	.	T	TG	4143.02	PASS	AB=1.000;AC=49;AF=0.875;AN=56;BaseQRankSum=5.665;DP=254;FS=9.692;HRun=1;HaplotypeScore=235.3973;InbreedingCoeff=0.6084;MQ=93.93;MQ0=0;MQRankSum=-8.048;QD=20.21;ReadPosRankSum=3.012;VQSLOD=2.5202;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:11:18.91:186,19,0	0/0:11,0:11:30.10:0,30,390	0/0:23,0:23:69.18:0,69,828	0/0:15,0:15:42.11:0,42,509	1/1:3,0:3:8.99:78,9,0	1/1:13,0:13:22.58:205,23,0	1/1:6,0:6:13.92:171,14,0	1/1:9,0:9:20.85:251,21,0	1/1:14,0:14:33.06:402,33,0	1/1:9,0:9:16.98:175,17,0	1/1:8,0:8:14.03:113,14,0	1/1:11,0:11:22.31:252,22,0	1/1:7,0:7:11.79:215,12,0	1/1:12,2:14:21.78:329,22,0	1/1:9,3:12:4.62:171,5,0	0/1:7,0:7:2.08:56,0,2	1/1:7,3:10:4.87:68,5,0	1/1:4,0:4:8.99:90,9,0	1/1:6,0:6:6.64:97,7,0	1/1:15,0:15:39.94:424,40,0	1/1:3,0:3:3:25,3,0	1/1:3,0:3:9:91,9,0	1/1:4,2:6:11.90:118,12,0	1/1:11,0:11:14.54:161,15,0	1/1:6,0:6:15.02:161,15,0	1/1:8,0:8:15.43:198,15,0	1/1:6,0:6:6.58:69,7,0	1/1:3,0:3:0.98:37,1,0
chr10	42006147	.	T	TA	2858.30	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-11.180;DP=659;FS=2.747;HRun=2;HaplotypeScore=59.6595;InbreedingCoeff=0.9985;MQ=81.81;MQ0=0;MQRankSum=-1.438;QD=35.29;ReadPosRankSum=-0.710;VQSLOD=3.7131;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:66.19:0,66,804	0/0:8,0:8:24.08:0,24,297	0/0:21,0:21:44.66:0,45,621	0/0:14,0:14:41.34:0,41,423	1/1:2,28:29:78.22:1100,78,0	0/0:24,0:24:72.23:0,72,893	0/0:22,0:22:57.18:0,57,706	0/0:22,0:22:60.18:0,60,733	1/1:3,16:19:45.15:648,45,0	0/0:28,0:28:84.25:0,84,1020	0/0:23,0:23:66.21:0,66,818	0/0:27,0:27:81.24:0,81,991	0/0:30,0:30:87.26:0,87,1065	0/0:30,0:30:90.28:0,90,1116	0/0:32,0:32:96.30:0,96,1190	1/1:0,32:32:87.29:1253,87,0	0/0:19,0:19:54.17:0,54,669	0/0:15,0:15:45.14:0,45,558	0/0:20,0:20:54.15:0,54,646	0/0:35,0:35:99:0,102,1250	0/0:20,0:20:57.16:0,57,692	0/0:31,0:31:81.25:0,81,1004	0/0:19,0:19:51.14:0,51,618	0/0:22,0:22:66.21:0,66,817	0/0:21,0:21:63.18:0,63,767	0/0:32,0:32:93.28:0,93,1141	0/0:31,0:31:93.28:0,93,1138	0/0:8,0:8:24.07:0,24,292
chr10	42007919	.	ATG	A	7338.14	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=13.204;DP=677;FS=2.350;HRun=0;HaplotypeScore=83.6186;InbreedingCoeff=0.9944;MQ=92.70;MQ0=1;MQRankSum=-3.214;QD=44.21;ReadPosRankSum=0.535;VQSLOD=5.9885;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:72.21:0,72,1328	0/0:12,0:12:36.12:0,36,731	0/0:32,0:32:88.77:0,89,1573	0/0:27,0:25:59.30:0,59,1091	0/0:29,0:29:81.28:0,81,1612	0/0:25,0:25:75.23:0,75,1438	0/0:18,0:18:54.14:0,54,989	1/1:0,38:38:99:1732,111,0	0/0:30,0:30:90.26:0,90,1714	0/0:29,0:29:84.27:0,84,1635	0/0:27,0:27:81.23:0,81,1533	0/0:20,0:20:60.19:0,60,1181	0/0:26,0:26:78.23:0,78,1497	0/0:21,0:21:63.20:0,63,1242	0/0:26,0:26:78.25:0,78,1547	0/0:19,0:19:57.18:0,57,1121	0/0:24,0:24:72.25:0,72,1444	0/0:19,0:19:57.17:0,57,1084	1/1:0,25:25:75.16:1108,75,0	1/1:0,25:25:63.22:1026,63,0	1/1:0,26:26:66.23:1076,66,0	0/0:29,0:29:87.23:0,87,1583	0/0:25,0:25:75.23:0,75,1412	0/0:22,0:22:66.23:0,66,1305	0/0:27,0:27:81.25:0,81,1563	1/1:0,27:27:81.25:1272,81,0	1/1:0,21:21:57.19:929,57,0	1/1:0,4:4:12.04:195,12,0
chr10	42009893	.	T	TA	5247.44	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=1.799;DP=400;FS=8.232;HRun=0;HaplotypeScore=65.7423;InbreedingCoeff=0.9309;MQ=64.66;MQ0=1;MQRankSum=-1.554;QD=27.76;ReadPosRankSum=-0.432;VQSLOD=4.7066;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:43:0,43,299	0/0:8,0:8:24.08:0,24,335	0/0:8,0:7:12.72:0,13,153	0/0:5,0:5:12.04:0,12,168	1/1:0,20:20:60.18:722,60,0	0/0:15,0:15:41.90:0,42,204	0/0:7,0:7:13.29:0,13,117	1/1:12,37:49:99:1290,110,0	1/1:2,10:12:30.09:355,30,0	0/0:17,0:17:51.17:0,51,713	0/0:20,0:20:54.18:0,54,744	0/0:5,0:5:5.75:0,6,30	0/0:7,0:7:16.18:0,16,104	0/0:9,0:9:20.13:0,20,107	0/0:7,0:7:21.06:0,21,279	1/1:1,13:14:31.86:394,32,0	0/0:28,0:27:70.92:0,71,410	0/0:20,0:20:56:0,56,752	1/1:4,19:23:58.13:718,58,0	1/1:5,15:20:47.79:561,48,0	1/1:2,1:3:3.01:36,3,0	0/0:4,0:4:11.50:0,12,61	0/0:12,0:12:25.60:0,26,131	0/0:5,0:5:11.28:0,11,55	0/0:15,0:15:45.15:0,45,626	1/1:3,17:20:48.10:577,48,0	1/1:6,11:16:29.11:338,29,0	1/1:3,8:11:20.34:257,20,0
chr10	42009894	.	T	TA	7854.95	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=2.516;DP=400;FS=6.272;HRun=6;HaplotypeScore=55.5616;InbreedingCoeff=0.9380;MQ=64.69;MQ0=1;MQRankSum=-2.260;QD=28.88;ReadPosRankSum=-1.567;VQSLOD=4.8275;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,14:18:36.11:448,36,0	0/0:8,0:8:24.05:0,24,245	0/0:8,0:7:17.28:0,17,135	0/0:5,0:5:15.01:0,15,145	1/1:20,0:20:60.19:748,60,0	1/1:0,15:15:45.14:566,45,0	1/1:3,4:7:9.03:113,9,0	1/1:49,0:49:99:1389,120,0	1/1:11,0:11:30.09:375,30,0	0/0:17,0:17:42.09:0,42,428	0/0:20,0:20:51.10:0,51,512	1/1:0,5:5:6.02:75,6,0	1/1:1,6:7:15.05:189,15,0	1/1:0,9:9:21.07:264,21,0	0/0:7,0:7:21.04:0,21,208	1/1:14,0:14:33.10:412,33,0	0/0:27,0:27:14.63:0,15,193	0/0:21,0:21:48:0,48,468	1/1:23,0:23:60.17:725,60,0	1/1:19,0:19:48.14:587,48,0	1/1:2,0:2:6:60,6,0	1/1:0,5:5:12.04:151,12,0	1/1:1,11:12:27:319,27,0	1/1:0,5:5:12.04:151,12,0	0/0:15,0:15:42.10:0,42,428	1/1:20,0:20:48.14:584,48,0	1/1:19,0:19:38.99:412,39,0	1/1:11,0:11:24.53:286,25,0
chr10	42011323	.	A	ATTGTTG	1292.32	PASS	AB=1.000;AC=20;AF=0.357;AN=56;BaseQRankSum=-3.931;DP=762;FS=1.205;HRun=0;HaplotypeScore=216.9309;InbreedingCoeff=0.0713;MQ=66.47;MQ0=9;MQRankSum=-3.258;QD=2.96;ReadPosRankSum=-0.376;VQSLOD=2.7098;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:55.81:0,56,714	0/0:9,0:9:21.07:0,21,398	0/0:36,0:19:3:0,3,25	0/0:27,0:16:0.47:0,0,1	1/1:17,12:29:14.13:261,14,0	0/1:24,0:24:3.28:3,0,33	0/0:18,0:18:0.47:0,0,1	1/1:28,0:28:3.73:16,4,0	1/1:24,0:25:11.70:227,12,0	0/1:36,0:36:91.33:91,0,204	0/1:28,0:28:6.67:7,0,119	0/1:27,0:26:3.73:4,0,183	0/0:29,0:29:12.18:0,12,264	0/0:22,0:22:18.24:0,18,315	0/1:43,0:43:43.28:43,0,521	1/1:27,15:44:24.29:621,24,0	0/0:9,0:28:12.35:0,12,292	0/1:19,0:19:46.16:46,0,180	0/0:28,0:27:7.28:0,7,24	0/0:34,0:31:10.47:0,10,51	0/0:38,0:37:12.24:0,12,57	0/1:25,0:24:2.09:2,0,69	0/1:20,0:20:1.26:5,0,1	0/1:16,0:16:10.47:10,0,35	0/1:22,0:22:86.42:86,0,143	0/1:22,0:22:9.92:10,0,70	0/1:29,0:29:16.85:17,0,48	0/0:19,0:19:3.61:0,4,59
chr10	42011326	.	G	GTT	9154.56	PASS	AB=0.575;AC=31;AF=0.554;AN=56;BaseQRankSum=1.989;DP=752;FS=5.751;HRun=2;HaplotypeScore=147.7796;InbreedingCoeff=0.9146;MQ=65.67;MQ0=9;MQRankSum=-1.805;QD=22.33;ReadPosRankSum=1.358;VQSLOD=3.2696;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:38,0:38:46.19:535,46,0	0/0:9,0:9:27.09:0,27,393	0/0:36,0:19:57.08:0,57,760	0/0:26,0:15:38.89:0,39,515	0/0:28,0:28:56.99:0,57,769	1/1:23,0:23:14.88:181,15,0	1/1:17,0:17:9.03:124,9,0	1/1:3,23:28:75.15:997,75,0	0/0:25,0:25:23.97:0,24,513	0/0:35,0:35:96.58:0,97,1232	0/0:27,0:27:75.22:0,75,1029	1/1:26,0:25:20.73:180,21,0	1/1:24,0:24:29.40:271,29,0	1/1:22,0:22:39.49:349,39,0	0/0:42,0:42:99:0,120,1707	0/0:45,0:45:35.97:0,36,813	0/0:29,0:29:53.97:0,54,582	0/0:18,0:18:46.68:0,47,599	1/1:2,25:26:78.11:1113,78,0	1/1:2,32:31:89.89:1377,90,0	1/1:4,35:38:39.12:699,39,0	1/1:24,0:23:59.92:757,60,0	1/1:20,0:20:20.73:228,21,0	1/1:16,0:16:17.85:212,18,0	0/0:22,0:22:62.96:0,63,813	0/1:6,17:23:25.88:764,0,26	1/1:5,26:31:50.61:910,51,0	1/1:1,17:18:26.46:458,26,0
chr10	42011328	.	TGTTGTTGTTG	T	9332.35	PASS	AB=0.918;AC=25;AF=0.446;AN=56;BaseQRankSum=-4.962;DP=744;FS=2.406;HRun=0;HaplotypeScore=226.7173;InbreedingCoeff=0.4828;MQ=65.68;MQ0=9;MQRankSum=0.758;QD=23.10;ReadPosRankSum=0.781;VQSLOD=4.3220;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:2,0:36:99:270,0,1060	0/0:10,0:10:30.10:0,30,1252	0/0:36,0:19:57.08:0,57,858	0/0:26,0:15:38.64:0,39,542	0/0:28,0:28:68.73:0,69,1269	1/1:1,18:21:18.03:391,18,0	1/1:0,17:17:9.03:257,9,0	1/1:26,0:26:24.60:953,25,0	0/0:25,0:25:51.17:0,51,1256	0/0:33,0:33:95:0,95,2446	0/0:25,0:25:75.03:0,75,1519	1/1:1,19:25:26.85:626,27,0	1/1:1,20:25:38.05:1042,38,0	1/1:1,14:23:45.15:1074,45,0	0/0:42,0:42:99:0,126,3975	0/0:44,0:44:84.76:0,85,2365	0/0:30,0:30:60.20:0,60,1246	0/0:19,0:19:37.62:0,38,1240	0/1:26,0:25:99:870,0,112	0/1:33,0:30:99:942,0,396	0/1:40,0:39:99:120,0,502	1/1:1,20:23:62.20:1018,62,0	1/1:0,17:20:23.41:434,23,0	1/1:1,13:16:18.53:374,19,0	0/0:22,0:22:48.95:0,49,1546	0/1:24,0:25:99:669,0,772	0/1:28,0:28:99:266,0,956	0/1:17,0:18:25.30:25,0,535
chr10	42011361	.	TGTTGTC	T	4781.63	PASS	AB=0.994;AC=29;AF=0.518;AN=56;BaseQRankSum=5.986;DP=759;FS=21.876;HRun=0;HaplotypeScore=242.2262;InbreedingCoeff=-0.1009;MQ=52.05;MQ0=10;MQRankSum=2.263;QD=7.65;ReadPosRankSum=-4.947;VQSLOD=1.7875;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:44,0:44:99:146,0,844	0/0:13,0:12:35.94:0,36,630	0/0:17,0:7:14.29:0,14,98	0/0:22,0:8:10.61:0,11,100	0/0:21,0:21:3.66:0,4,196	1/1:15,1:16:29.36:230,29,0	1/1:24,0:24:9.14:136,9,0	0/1:42,0:40:66.26:66,0,236	0/0:22,0:22:9.66:0,10,423	0/1:31,0:30:99:270,0,500	0/1:16,0:15:91.37:91,0,136	1/1:24,5:28:32.92:467,33,0	1/1:27,4:31:67.72:627,68,0	1/1:26,8:34:82.36:846,82,0	0/1:38,0:38:99:293,0,734	0/0:39,0:39:67.53:0,68,1076	0/1:32,0:32:8.93:9,0,304	0/1:15,0:15:99:126,0,184	0/1:20,0:19:41.65:42,0,291	0/1:31,0:28:99:138,0,472	0/1:44,0:42:99:137,0,599	1/1:34,3:36:33.28:377,33,0	0/1:20,2:22:9.30:130,0,9	1/1:19,1:20:21.01:175,21,0	0/1:22,0:22:99:269,0,250	0/1:27,0:27:99:101,0,433	0/1:30,0:30:91.38:91,0,777	0/1:20,0:20:14.13:14,0,518
chr10	42011364	.	TGTC	T	4896.86	PASS	AB=0.961;AC=29;AF=0.518;AN=56;BaseQRankSum=7.160;DP=753;FS=15.522;HRun=0;HaplotypeScore=206.0025;InbreedingCoeff=-0.1033;MQ=52.01;MQ0=11;MQRankSum=1.948;QD=7.92;ReadPosRankSum=-1.072;VQSLOD=3.1429;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:42,1:43:99:158,0,522	0/0:14,0:13:38.87:0,39,441	0/0:16,0:7:20.30:0,20,154	0/0:21,0:8:9.32:0,9,122	0/0:16,0:16:0:0,0,121	1/1:17,0:16:29.32:193,29,0	1/1:21,2:23:9.13:133,9,0	0/1:38,4:40:66.50:67,0,228	0/0:24,0:24:14.12:0,14,314	0/1:36,0:35:89.61:418,0,90	0/1:13,1:13:7.98:150,0,8	1/1:26,2:27:32.72:366,33,0	1/1:30,2:32:69.45:499,69,0	1/1:30,4:34:85.32:688,85,0	0/1:39,0:39:89.54:420,0,90	0/0:44,0:44:56.40:0,56,798	0/1:32,0:32:99:109,0,183	0/1:14,0:14:13.05:156,0,13	0/1:20,1:20:38.90:39,0,218	0/1:24,5:26:99:139,0,251	0/1:39,1:38:99:156,0,319	1/1:32,4:35:33.28:335,33,0	0/1:21,0:21:7.14:131,0,7	1/1:20,0:20:21.02:154,21,0	0/1:21,0:21:19.24:305,0,19	0/1:28,0:28:99:153,0,193	0/1:26,2:28:99:115,0,384	0/1:17,3:20:14.63:15,0,280
chr10	42011370	.	T	TGTC	789.06	PASS	AB=0.983;AC=16;AF=0.286;AN=56;BaseQRankSum=6.626;DP=760;FS=41.850;HRun=0;HaplotypeScore=227.8952;InbreedingCoeff=-0.4027;MQ=53.05;MQ0=9;MQRankSum=6.173;QD=1.81;ReadPosRankSum=4.664;VQSLOD=1.3701;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:44,0:44:99:102,0,493	0/0:13,0:13:39.11:0,39,600	0/0:15,0:8:20.93:0,21,267	0/0:22,0:13:39.11:0,39,577	0/1:15,0:15:52.01:52,0,275	0/1:16,0:15:27.94:38,0,28	0/1:22,0:22:25.61:26,0,103	0/0:45,0:43:11.79:0,12,635	0/1:16,9:25:24.50:24,0,565	0/0:33,0:32:80.28:0,80,839	0/0:13,0:12:32.88:0,33,339	0/1:27,0:26:74.98:75,0,125	0/1:33,0:33:39.32:39,0,230	0/1:35,0:35:80.89:81,0,125	0/0:47,0:47:99:0,117,1313	0/0:46,0:46:42.68:0,43,1289	0/0:33,0:33:69.15:0,69,1072	0/0:14,0:14:39.36:0,39,390	0/0:20,0:20:14.69:0,15,358	0/1:29,0:26:77.76:78,0,184	0/1:38,0:37:93.52:94,0,243	0/1:33,0:32:45.42:115,0,45	0/1:21,0:21:25.45:25,0,123	0/1:19,0:19:19.20:19,0,55	0/0:24,0:24:59.52:0,60,584	0/1:28,0:28:49.08:49,0,294	0/1:31,0:31:98.21:98,0,414	0/1:19,0:19:33.48:33,0,165
chr10	42011384	.	T	TTGA	12938.06	PASS	AB=0.984;AC=32;AF=0.571;AN=56;BaseQRankSum=1.766;DP=748;FS=3.198;HRun=0;HaplotypeScore=193.7743;InbreedingCoeff=0.8723;MQ=55.75;MQ0=6;MQRankSum=-1.671;QD=28.37;ReadPosRankSum=1.442;VQSLOD=5.0053;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:37,3:40:56.96:1195,57,0	0/0:12,0:12:27.08:0,27,374	0/0:27,0:20:31.79:0,32,435	0/0:32,0:24:66.63:0,67,779	0/0:17,0:17:35.08:0,35,376	1/1:12,0:11:24.06:417,24,0	1/1:21,0:21:33.94:504,34,0	1/1:34,0:33:66.14:967,66,0	0/0:25,0:25:53.54:0,54,631	0/0:32,0:32:78.03:0,78,793	0/0:16,0:16:35.86:0,36,342	1/1:26,1:26:41.17:899,41,0	1/1:36,1:37:62.15:970,62,0	1/1:31,2:34:80.69:1149,81,0	0/0:48,0:48:99:0,111,1102	0/0:43,0:43:95.72:0,96,1202	0/1:28,0:28:4.12:4,0,256	0/0:15,0:15:26.87:0,27,231	1/1:20,0:20:19.04:439,19,0	1/1:22,0:22:54.49:924,54,0	1/1:32,3:34:63.07:1061,63,0	1/1:35,0:35:81.17:1241,81,0	1/1:21,0:21:27.07:459,27,0	1/1:19,1:20:21.03:319,21,0	0/0:25,0:25:60.94:0,61,602	0/1:29,1:30:24.91:1004,0,25	1/1:25,4:29:69.09:997,69,0	1/1:10,1:11:21.07:390,21,0
chr10	42011760	.	TGCTC	T	1318.31	PASS	AB=0.850;AC=12;AF=0.214;AN=56;BaseQRankSum=7.800;DP=746;FS=7.646;HRun=0;HaplotypeScore=198.0754;InbreedingCoeff=-0.2739;MQ=56.15;MQ0=0;MQRankSum=-7.273;QD=4.12;ReadPosRankSum=-7.373;VQSLOD=-0.6350;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:68.57:0,69,2598	0/0:9,0:9:27.08:0,27,671	0/0:32,0:23:59.07:0,59,1206	0/0:41,0:27:69.63:0,70,1459	0/0:28,0:28:84.25:0,84,2235	0/1:16,2:18:99:120,0,636	0/1:10,6:16:73.29:73,0,539	0/1:25,9:34:99:269,0,1515	0/0:27,0:27:78.27:0,78,2130	0/0:34,0:34:99:0,102,2389	0/0:12,0:12:36.05:0,36,844	0/0:31,0:31:30.83:0,31,1250	0/1:25,4:29:26.68:27,0,1432	0/1:24,6:30:99:129,0,1329	0/0:30,0:30:90.31:0,90,2387	0/0:30,0:30:90.30:0,90,2405	0/0:34,0:34:99:0,99,2566	0/0:23,0:23:68.90:0,69,1799	0/0:10,0:9:14.18:0,14,461	0/1:22,6:25:99:183,0,564	0/1:22,4:26:64.30:64,0,863	0/1:22,0:22:56.27:56,0,725	0/1:20,4:24:68.56:69,0,668	0/1:22,9:31:99:109,0,766	0/0:35,0:35:99:0,105,2812	0/1:29,5:34:99:248,0,1534	0/1:24,4:28:99:122,0,998	0/0:8,0:8:24.01:0,24,565
chr10	42011761	.	G	GCTCCATTC	15255.58	PASS	AB=0.969;AC=20;AF=0.357;AN=56;BaseQRankSum=7.315;DP=744;FS=2.272;HRun=0;HaplotypeScore=205.1890;InbreedingCoeff=0.1586;MQ=55.25;MQ0=0;MQRankSum=-12.969;QD=41.57;ReadPosRankSum=-2.537;VQSLOD=3.9153;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:58.76:0,59,1546	0/0:9,0:9:13.11:0,13,570	0/0:33,0:24:47.05:0,47,896	0/0:43,0:26:50.30:0,50,1136	0/0:28,0:28:78.26:0,78,2040	1/1:17,0:17:9.31:1045,9,0	0/1:16,0:16:53.43:310,0,53	0/1:32,0:32:99:403,0,101	0/0:27,0:27:78.23:0,78,1995	0/0:32,0:32:78.26:0,78,2036	0/0:12,0:12:30.08:0,30,721	0/1:32,0:32:36.54:1588,0,37	0/1:29,0:29:66.39:1703,0,66	0/1:28,0:28:16.85:1208,0,17	0/0:30,0:30:87.25:0,87,2144	0/0:30,0:30:87.27:0,87,2174	0/0:35,0:35:94.19:0,94,2319	0/0:24,0:24:69.15:0,69,1671	0/1:10,0:9:7.42:283,0,7	1/1:28,0:25:3.74:1327,4,0	0/1:26,0:26:9.82:440,0,10	0/1:14,9:25:23.90:773,0,24	1/1:24,0:24:27.85:1582,28,0	1/1:30,0:30:30.37:1138,30,0	0/0:35,0:35:99:0,102,2612	0/1:34,0:34:99:1929,0,120	1/1:28,0:28:0.10:1331,0,0	0/1:8,0:8:54.96:195,0,55
chr10	42011764	.	C	CCATT	8768.86	PASS	AB=0.788;AC=17;AF=0.304;AN=56;BaseQRankSum=13.526;DP=740;FS=1.758;HRun=0;HaplotypeScore=173.7614;InbreedingCoeff=-0.2647;MQ=54.44;MQ0=0;MQRankSum=-11.286;QD=21.87;ReadPosRankSum=-1.698;VQSLOD=4.5272;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:37,0:37:20.66:21,0,731	0/0:8,0:8:13.11:0,13,408	0/0:33,0:24:49.06:0,49,789	0/0:41,0:26:64.24:0,64,949	0/0:29,0:29:84.25:0,84,1550	0/1:9,8:17:69.85:577,0,70	0/1:14,2:16:84.77:162,0,85	0/1:31,0:31:99:224,0,209	0/0:28,0:28:81.25:0,81,1547	0/0:28,0:28:81.26:0,81,1512	0/0:10,0:10:30.09:0,30,563	0/1:18,14:32:53.86:979,0,54	0/1:16,14:30:33.39:970,0,33	0/1:22,6:28:73.14:691,0,73	0/0:31,0:31:93.25:0,93,1641	0/0:30,0:30:90.25:0,90,1646	0/0:38,0:38:99:0,111,1928	0/0:25,0:25:70.66:0,71,1342	0/1:10,2:11:81.11:203,0,81	1/1:13,14:24:50.34:807,50,0	0/1:22,4:26:21.64:313,0,22	0/1:17,8:25:84.11:451,0,84	0/1:10,14:24:31.22:867,0,31	0/1:20,10:30:18.99:598,0,19	0/0:37,0:37:99:0,111,2017	0/1:20,14:34:99:1066,0,214	0/1:13,11:24:19.68:735,0,20	0/1:6,2:8:99:105,0,143
chr10	42011768	.	T	TCCTC	8122.37	PASS	AB=0.765;AC=15;AF=0.268;AN=56;BaseQRankSum=15.778;DP=728;FS=1.830;HRun=0;HaplotypeScore=174.7102;InbreedingCoeff=-0.3661;MQ=52.81;MQ0=1;MQRankSum=-14.013;QD=22.56;ReadPosRankSum=3.267;VQSLOD=4.6808;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:98.14:0,98,1712	0/0:8,0:8:21.07:0,21,397	0/0:29,0:22:45.51:0,46,741	0/0:39,0:25:55.17:0,55,882	0/0:29,0:29:84.27:0,84,1510	0/1:9,8:17:99:561,0,153	0/1:15,2:17:99:154,0,246	0/1:30,0:30:99:312,0,517	0/0:30,0:30:81.26:0,81,1496	0/0:27,0:27:78.26:0,78,1407	0/0:12,0:12:30.09:0,30,537	0/1:19,14:33:99:845,0,275	0/1:19,14:33:99:918,0,268	0/1:17,7:24:99:542,0,307	0/0:29,0:29:81.28:0,81,1520	0/0:31,0:31:93.26:0,93,1600	0/0:37,0:37:99:0,108,1922	0/0:26,0:26:78.08:0,78,1323	0/1:10,2:11:99:186,0,173	0/1:11,14:22:48.84:720,0,49	0/1:22,4:26:99:297,0,214	0/1:18,7:25:99:406,0,231	0/1:9,14:23:88.77:814,0,89	0/1:19,10:29:88.76:580,0,89	0/0:36,0:36:99:0,108,1976	0/1:20,14:34:99:976,0,458	0/1:14,10:24:99:713,0,187	0/1:6,2:8:98.58:99,0,269
chr10	42011776	.	C	CCCTTCCTC	20720.82	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-0.921;DP=755;FS=13.931;HRun=0;HaplotypeScore=203.1804;InbreedingCoeff=0.9871;MQ=51.75;MQ0=1;MQRankSum=-14.391;QD=53.40;ReadPosRankSum=-2.424;VQSLOD=3.2784;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:84.20:0,84,1996	0/0:8,0:8:21.05:0,21,493	0/0:24,0:19:35.61:0,36,596	0/0:32,0:25:35.66:0,36,682	0/0:29,0:29:72.22:0,72,1715	1/1:17,0:17:44.74:1341,45,0	1/1:18,0:18:16.77:469,17,0	1/1:33,0:33:62.88:1101,63,0	0/0:30,0:30:75.24:0,75,1857	0/0:31,0:30:66.21:0,66,1546	0/0:12,0:12:30.07:0,30,672	1/1:25,9:35:56.97:1955,57,0	1/1:35,0:35:63.17:2161,63,0	1/1:23,0:23:51.02:1532,51,0	0/0:32,0:32:72.22:0,72,1740	0/0:28,0:28:81.24:0,81,1923	0/0:40,0:40:75.65:0,76,2227	0/0:28,0:28:63.14:0,63,1478	1/1:13,0:12:26.96:438,27,0	1/1:30,0:27:45.05:1623,45,0	1/1:26,0:26:41.62:940,42,0	1/1:29,0:29:35.91:1017,36,0	1/1:26,0:26:53.38:1907,53,0	1/1:30,0:30:53.58:1646,54,0	0/0:38,0:39:79.87:0,80,2257	1/1:36,0:36:8.79:2460,9,0	1/1:29,0:29:60.01:1820,60,0	1/1:8,0:8:14.92:311,15,0
chr10	42014237	.	T	TTATCTATC	8520.68	PASS	AB=1.000;AC=27;AF=0.563;AN=48;BaseQRankSum=-8.860;DP=600;FS=4.058;HRun=0;HaplotypeScore=171.0946;InbreedingCoeff=0.8071;MQ=54.04;MQ0=0;MQRankSum=0.228;QD=25.98;ReadPosRankSum=-4.369;VQSLOD=3.7893;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:31:17.55:0,18,325	0/0:4,0:11:0.79:0,1,136	./.	./.	1/1:18,11:34:30.10:1007,30,0	1/1:12,12:25:27.09:1065,27,0	0/1:17,0:17:23.75:176,0,24	0/0:20,0:20:3:0,3,26	1/1:6,9:20:21.07:852,21,0	1/1:14,11:29:42.10:1121,42,0	1/1:13,0:40:74.89:650,75,0	1/1:10,9:19:12.04:485,12,0	0/0:21,0:21:33.10:0,33,742	1/1:1,6:9:12.04:486,12,0	1/1:14,0:34:32.92:268,33,0	1/1:17,0:25:21.07:729,21,0	1/1:19,0:19:12.02:296,12,0	1/1:4,0:8:5.99:49,6,0	0/0:18,0:25:18.03:0,18,250	0/0:10,0:32:42.14:0,42,751	./.	0/0:21,0:21:39.08:0,39,849	1/1:10,8:20:15.05:606,15,0	./.	1/1:14,11:29:18.06:731,18,0	0/0:10,0:31:51:0,51,799	0/0:14,0:31:30.09:0,30,511	0/0:9,0:18:21.07:0,21,391
chr10	42014476	.	TG	T	2661.05	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.417;DP=660;FS=3.444;HRun=2;HaplotypeScore=65.3383;InbreedingCoeff=0.9992;MQ=75.57;MQ0=0;MQRankSum=0.582;QD=34.56;ReadPosRankSum=2.551;VQSLOD=4.0955;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:87.21:0,87,1247	0/0:14,0:14:42.14:0,42,629	0/0:23,0:22:66.19:0,66,932	0/0:22,0:21:63.17:0,63,876	1/1:1,35:36:99:1324,102,0	0/0:36,0:36:99:0,105,1565	0/0:17,0:17:51.17:0,51,764	0/0:24,0:24:69.22:0,69,1000	1/1:0,23:23:66.21:857,66,0	0/0:31,0:31:84.28:0,84,1259	0/0:18,0:18:54.18:0,54,792	0/0:22,0:22:63.21:0,63,942	0/0:29,0:29:84.23:0,84,1190	0/0:15,0:15:45.15:0,45,673	0/0:39,0:39:99:0,117,1711	1/1:0,18:18:48.16:623,48,0	0/0:19,0:19:57.19:0,57,795	0/0:15,0:15:45.15:0,45,671	0/0:18,0:18:48.14:0,48,682	0/0:24,0:24:72.23:0,72,1059	0/0:31,0:31:90.29:0,90,1328	0/0:23,0:23:69.23:0,69,1029	0/0:26,0:26:75.25:0,75,1123	0/0:21,0:21:60.19:0,60,878	0/0:25,0:25:75.25:0,75,1122	0/0:22,0:22:66.21:0,66,968	0/0:30,0:30:90.30:0,90,1342	0/0:8,0:8:24.02:0,24,312
chr10	42014969	.	AT	A	7387.81	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=2.475;DP=559;FS=6.280;HRun=8;HaplotypeScore=62.8048;InbreedingCoeff=0.9878;MQ=66.89;MQ0=1;MQRankSum=-0.856;QD=24.38;ReadPosRankSum=1.055;VQSLOD=5.6904;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,9:9:24.04:231,24,0	0/0:11,0:11:33.10:0,33,398	0/0:21,0:14:36.07:0,36,416	0/0:12,0:12:21.45:0,21,229	0/0:31,0:31:81.22:0,81,955	1/1:1,17:18:42.07:406,42,0	1/1:1,10:11:27.04:261,27,0	1/1:5,27:32:81.12:782,81,0	0/0:26,0:26:78.24:0,78,942	0/0:20,0:20:54.17:0,54,652	0/0:23,0:23:54.17:0,54,652	1/1:0,13:13:33.05:319,33,0	1/1:3,17:20:51.08:492,51,0	1/1:1,13:14:36.06:348,36,0	0/0:18,0:18:54.15:0,54,641	0/0:25,0:25:72.21:0,72,859	0/0:2,0:24:54.75:0,55,288	0/0:13,0:13:36.11:0,36,432	1/1:7,10:17:7.56:264,8,0	1/1:3,27:30:81.13:781,81,0	1/1:2,16:18:42.06:406,42,0	1/1:2,17:19:48.07:463,48,0	1/1:2,25:27:75.12:724,75,0	1/1:0,14:15:27.32:362,27,0	0/0:31,0:31:87.27:0,87,1050	1/1:3,25:28:41.86:682,42,0	1/1:0,21:21:63.10:608,63,0	1/1:0,10:10:27.04:261,27,0
chr10	42015077	.	C	CT	4452.27	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=14.459;DP=598;FS=5.118;HRun=1;HaplotypeScore=67.6728;InbreedingCoeff=0.9973;MQ=79.79;MQ0=0;MQRankSum=-1.771;QD=44.97;ReadPosRankSum=2.807;VQSLOD=4.4797;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:15:42.10:0,42,549	0/0:12,0:12:36.12:0,36,504	0/0:19,0:19:54.17:0,54,723	0/0:11,0:11:30.10:0,30,408	1/1:2,23:25:66.22:1050,66,0	0/0:26,0:26:78.25:0,78,1074	0/0:13,0:13:39.13:0,39,546	0/0:42,0:42:99:0,126,1732	1/1:0,23:23:66.23:1054,66,0	0/0:25,0:25:75.25:0,75,1045	0/0:26,0:26:78.26:0,78,1090	0/0:19,0:19:57.16:0,57,776	0/0:17,0:17:51.16:0,51,696	0/0:18,0:18:54.18:0,54,752	0/0:22,0:22:66.20:0,66,890	1/1:0,27:27:78.27:1245,78,0	1/1:0,24:24:69.24:1102,69,0	0/0:6,0:6:18.06:0,18,252	0/0:24,0:24:69.22:0,69,965	0/0:20,0:20:60.17:0,60,818	0/0:14,0:14:42.14:0,42,587	0/0:28,0:28:84.25:0,84,1126	0/0:24,0:24:72.22:0,72,986	0/0:27,0:27:43.69:0,44,1013	0/0:21,0:21:63.19:0,63,862	0/0:30,0:30:87.28:0,87,1202	0/0:30,0:29:90.30:0,90,1259	0/0:9,0:9:27.09:0,27,378
chr10	42015781	.	CAA	C	2153.85	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.909;DP=495;FS=3.402;HRun=3;HaplotypeScore=56.6765;InbreedingCoeff=0.9979;MQ=84.38;MQ0=1;MQRankSum=0.303;QD=38.46;ReadPosRankSum=3.129;VQSLOD=3.2965;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:54.19:0,54,1043	0/0:14,0:14:42.14:0,42,812	0/0:21,0:21:54.14:0,54,1006	0/0:13,0:13:36.12:0,36,675	1/1:0,22:22:60.20:918,60,0	0/0:21,0:21:63.22:0,63,1217	0/0:14,0:14:42.14:0,42,812	0/0:28,0:28:81.28:0,81,1545	1/1:0,13:13:36.12:551,36,0	0/0:22,0:22:63.22:0,63,1214	0/0:24,0:24:72.25:0,72,1391	0/0:14,0:14:42.14:0,42,812	0/0:20,0:20:60.21:0,60,1159	0/0:16,0:16:48.16:0,48,927	0/0:18,0:18:54.19:0,54,1044	1/1:0,21:20:54.18:827,54,0	0/0:14,0:13:42.12:0,42,776	0/0:8,0:8:21.07:0,21,389	0/0:16,0:16:48.16:0,48,928	0/0:27,0:27:81.25:0,81,1475	0/0:14,0:14:39.13:0,39,754	0/0:12,0:12:33.11:0,33,630	0/0:14,0:14:42.14:0,42,812	0/0:9,0:9:27.09:0,27,522	0/0:17,0:17:48.16:0,48,913	0/0:23,0:23:69.24:0,69,1334	0/0:26,0:26:78.25:0,78,1473	0/0:15,0:15:45.15:0,45,869
chr10	42016169	.	TTGATGTACTATGACC	T	719.31	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.518;DP=635;FS=1.507;HRun=0;HaplotypeScore=249.1123;InbreedingCoeff=0.9905;MQ=82.85;MQ0=0;MQRankSum=-3.242;QD=65.39;ReadPosRankSum=1.383;VQSLOD=3.3648;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:48.16:0,48,2921	0/0:12,0:12:36.12:0,36,2449	0/0:26,0:26:78.25:0,78,4892	0/0:29,0:29:51.43:0,51,4177	0/0:27,0:27:81.28:0,81,5748	0/0:30,0:30:84.29:0,84,6124	0/0:18,0:18:45.15:0,45,3304	0/0:42,0:42:99:0,111,7503	0/0:15,0:15:45.15:0,45,3101	0/0:20,0:20:60.21:0,60,4289	0/0:22,0:22:63.22:0,63,4384	0/0:25,0:25:72.25:0,72,5115	0/0:21,0:21:60.21:0,60,4110	0/0:28,0:28:84.29:0,84,5984	0/0:26,0:26:78.27:0,78,5622	0/0:33,0:33:96.33:0,96,6519	1/1:2,9:11:18.06:810,18,0	0/0:10,0:10:27.09:0,27,2024	0/0:13,0:13:39.11:0,39,2482	0/0:35,0:35:99:0,105,6684	0/0:28,0:28:81.28:0,81,5597	0/0:14,0:14:42.14:0,42,3074	0/0:27,0:27:75.26:0,75,5357	0/0:13,0:13:36.12:0,36,2674	0/0:22,0:22:63.22:0,63,4728	0/0:37,0:37:99:0,111,8047	0/0:17,0:17:51.18:0,51,3673	0/0:14,0:14:39.11:0,39,2472
chr10	42017236	.	CAA	C	858.72	PASS	AB=0.694;AC=11;AF=0.196;AN=56;BaseQRankSum=-0.168;DP=485;FS=5.617;HRun=16;HaplotypeScore=69.4497;InbreedingCoeff=0.5846;MQ=59.38;MQ0=8;MQRankSum=1.686;QD=6.46;ReadPosRankSum=2.945;VQSLOD=-0.0619;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:29:48.29:0,48,487	0/0:7,0:7:14.16:0,14,119	0/0:33,0:12:3.21:0,3,53	0/0:22,0:4:5.79:0,6,36	0/0:19,0:19:47.95:0,48,534	0/0:11,0:16:28.75:0,29,289	0/0:3,0:7:13.77:0,14,124	1/1:10,13:22:22.71:199,23,0	0/0:10,0:10:15.01:0,15,175	0/0:22,0:26:51.82:0,52,455	0/0:9,0:19:41.18:0,41,377	0/0:8,0:11:8.97:0,9,79	0/0:13,0:12:28.80:0,29,301	0/0:13,1:14:13.34:0,13,337	0/0:9,0:16:18.04:0,18,203	0/0:18,0:16:38.30:0,38,387	0/0:5,0:12:21.46:0,21,208	0/0:4,0:4:8.96:0,9,63	0/1:9,5:14:1.60:81,0,2	0/1:9,9:18:24.39:126,0,24	1/1:4,4:11:3.97:116,4,0	0/0:11,0:12:20.43:0,20,242	0/0:9,0:13:19.86:0,20,181	0/0:22,0:24:29.13:0,29,271	0/0:15,0:19:26.33:0,26,243	0/1:11,7:21:25.97:136,0,26	1/1:16,13:28:21.64:276,22,0	1/1:9,4:12:10.88:86,11,0
chr10	42017365	.	CGT	C	188.66	PASS	AB=0.921;AC=18;AF=0.563;AN=32;BaseQRankSum=3.593;DP=485;FS=0.000;HRun=0;HaplotypeScore=82.8310;InbreedingCoeff=-0.0276;MQ=72.70;MQ0=11;MQRankSum=-1.209;QD=0.91;ReadPosRankSum=1.772;VQSLOD=1.4269;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:0:0,0,0	0/1:3,0:4:2.14:2,0,90	./.	./.	./.	1/1:14,0:14:5.84:46,6,0	1/1:20,0:20:2.99:23,3,0	./.	1/1:2,0:3:2.84:14,3,0	0/0:12,0:12:5.91:0,6,44	0/1:16,2:18:20.01:20,0,119	./.	0/0:10,0:10:0:0,0,0	./.	0/1:13,0:13:8.19:8,0,11	0/0:17,0:17:2.96:0,3,19	./.	0/1:14,1:15:22.19:22,0,26	./.	0/1:23,0:22:3.83:23,0,4	./.	./.	./.	1/1:35,0:35:2.97:22,3,0	0/1:14,2:16:43.12:43,0,156	1/1:21,0:20:8.44:40,8,0	1/1:25,0:23:3:29,3,0	./.
chr10	42017398	.	GTGTGTGTGTGTGTGTGTT	G	2000.58	PASS	AB=0.954;AC=21;AF=0.375;AN=56;BaseQRankSum=4.178;DP=490;FS=17.726;HRun=0;HaplotypeScore=211.9992;InbreedingCoeff=0.3017;MQ=48.76;MQ0=17;MQRankSum=0.109;QD=6.52;ReadPosRankSum=-4.664;VQSLOD=0.0450;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:32:7.47:7,0,1430	0/0:9,0:9:27.08:0,27,1212	0/0:14,0:7:9.06:0,9,105	0/0:20,0:6:8.18:0,8,158	0/0:16,0:16:38.97:0,39,923	0/1:24,0:24:7.78:8,0,1352	0/1:18,0:18:36.24:36,0,605	1/1:24,0:22:5.30:364,5,0	0/0:10,0:9:24.01:0,24,360	0/0:16,0:15:44.16:0,44,1469	0/0:18,0:18:38.64:0,39,1662	0/0:11,0:9:18.53:0,19,588	0/1:12,0:12:84.77:85,0,413	0/0:10,0:10:18.06:0,18,565	0/0:14,0:14:32.99:0,33,965	0/0:12,0:12:29.96:0,30,557	0/1:21,0:19:3.04:3,0,329	0/0:16,0:16:10.66:0,11,1195	1/1:10,0:9:20.89:162,21,0	1/1:6,15:20:5.81:192,6,0	1/1:19,0:17:23.69:209,24,0	0/1:13,0:13:21.84:22,0,742	0/1:14,0:14:39.82:40,0,658	0/1:34,0:34:10.92:11,0,1591	0/0:17,0:17:36.17:0,36,2223	1/1:3,18:20:47.72:733,48,0	0/1:9,21:28:11.28:112,0,11	1/1:13,0:12:26.67:202,27,0
chr10	42018593	.	GTA	G	434.56	PASS	AB=0.993;AC=16;AF=0.286;AN=56;BaseQRankSum=2.257;DP=521;FS=37.436;HRun=0;HaplotypeScore=130.5388;InbreedingCoeff=-0.0611;MQ=69.76;MQ0=10;MQRankSum=-0.029;QD=1.75;ReadPosRankSum=4.075;VQSLOD=0.8248;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:18,0:18:0.34:0,0,39	0/0:8,0:8:24.08:0,24,472	0/0:36,0:25:47.19:0,47,1049	0/0:41,0:23:9.78:0,10,686	0/0:12,0:12:14.28:0,14,115	0/1:7,0:7:12.86:13,0,41	0/0:21,0:21:16.01:0,16,162	0/1:23,1:24:56.44:74,0,56	0/0:8,2:10:6.17:0,6,55	0/0:22,0:22:45.60:0,46,932	0/0:16,0:16:45.14:0,45,683	0/1:26,0:26:28.86:29,0,143	0/1:11,0:11:34.06:34,0,62	0/0:17,0:17:8.48:0,8,214	0/0:27,0:27:81.14:0,81,1119	0/1:11,0:11:3.96:4,0,50	0/1:23,0:23:16.87:59,0,17	0/0:10,0:10:9:0,9,84	0/1:14,0:13:34.70:48,0,35	0/0:24,0:23:36.94:0,37,220	1/1:25,0:25:30.11:115,30,0	0/1:16,0:16:10.29:10,0,88	0/0:14,0:14:11.83:0,12,145	0/1:27,0:27:24.38:24,0,195	0/0:15,0:15:8.99:0,9,84	0/1:22,1:23:48.63:100,0,49	1/1:17,0:17:4:77,4,0	0/1:6,0:6:2.68:3,0,35
chr10	42018597	.	GCC	G	5308.85	PASS	AB=0.990;AC=44;AF=0.786;AN=56;BaseQRankSum=-4.131;DP=564;FS=9.283;HRun=5;HaplotypeScore=116.3714;InbreedingCoeff=0.2093;MQ=65.86;MQ0=43;MQRankSum=0.926;QD=11.11;ReadPosRankSum=3.376;VQSLOD=1.0573;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:17:5.57:31,6,0	0/0:9,0:9:1.17:0,1,133	0/0:34,0:24:35.57:0,36,463	0/0:41,0:23:24.84:0,25,257	0/1:14,0:13:3.31:61,0,3	1/1:11,0:7:1.33:107,1,0	1/1:25,0:24:10.96:211,11,0	1/1:5,15:18:47.58:366,48,0	1/1:13,0:11:4.30:74,4,0	1/1:15,6:20:21.63:257,22,0	1/1:18,0:16:35.53:258,36,0	0/1:26,0:24:20.60:294,0,21	0/1:16,0:13:6.85:162,0,7	0/1:20,0:19:52.85:148,0,53	1/1:22,5:26:65.81:597,66,0	1/1:13,0:13:0.08:84,0,0	1/1:21,3:23:52.83:464,53,0	1/1:0,10:10:9.03:118,9,0	1/1:16,1:12:27.33:227,27,0	1/1:3,20:22:1.56:15,2,0	1/1:29,0:27:44.92:367,45,0	1/1:18,0:18:6.86:197,7,0	0/1:14,1:15:4.47:59,0,4	0/1:28,0:28:10.07:254,0,10	1/1:3,15:16:9.03:120,9,0	1/1:7,22:23:56.83:477,57,0	1/1:15,1:15:35.34:266,35,0	1/1:9,0:6:11.98:98,12,0
chr10	42018599	.	CCCCACA	C	3651.11	PASS	AB=0.997;AC=32;AF=0.571;AN=56;BaseQRankSum=-5.924;DP=575;FS=1.441;HRun=0;HaplotypeScore=149.3409;InbreedingCoeff=-0.1711;MQ=60.08;MQ0=58;MQRankSum=0.897;QD=7.57;ReadPosRankSum=1.140;VQSLOD=2.6898;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:1,17:18:5.82:49,6,0	0/0:11,0:10:24.04:0,24,351	0/0:33,0:22:36.38:0,36,495	0/0:37,0:19:23.99:0,24,260	0/1:16,0:14:56.74:57,0,79	0/1:14,0:9:99:99,0,134	0/1:24,0:23:98.55:99,0,340	1/1:19,0:17:47.41:366,47,0	0/1:13,0:11:44.78:45,0,110	0/1:22,0:20:99:146,0,448	0/1:19,0:16:99:127,0,198	0/1:26,0:24:99:241,0,345	0/1:18,0:15:43.84:44,0,399	0/1:22,0:20:91.60:92,0,462	0/1:26,0:25:99:176,0,236	0/1:13,0:13:48.79:49,0,232	0/1:23,0:22:99:129,0,256	0/0:12,0:10:9.02:0,9,93	1/1:16,0:11:24.40:249,24,0	1/1:23,0:21:7.88:32,8,0	1/1:30,0:27:41.90:342,42,0	0/1:19,0:19:99:132,0,328	0/1:16,0:15:42.72:43,0,294	0/1:27,0:27:99:203,0,400	0/1:18,0:16:2.34:2,0,54	1/1:31,0:24:31.77:508,32,0	1/1:18,0:15:35.76:324,36,0	1/1:9,0:4:11.98:98,12,0
chr10	42018639	.	ACACACACC	A	2901.34	PASS	AB=1.000;AC=20;AF=0.357;AN=56;BaseQRankSum=-7.394;DP=633;FS=12.399;HRun=0;HaplotypeScore=176.3987;InbreedingCoeff=0.3510;MQ=57.70;MQ0=29;MQRankSum=-1.010;QD=9.33;ReadPosRankSum=0.046;VQSLOD=1.7659;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:72.85:0,73,744	0/0:11,0:11:23.87:0,24,517	0/0:27,0:17:47.99:0,48,482	0/0:22,0:14:32.67:0,33,370	0/1:29,0:29:99:187,0,247	0/0:16,0:13:38.87:0,39,775	0/0:33,0:32:69.37:0,69,1206	1/1:23,0:21:59.97:528,60,0	0/1:20,0:18:99:115,0,174	0/1:28,0:25:99:165,0,939	0/0:14,0:12:0.57:0,1,367	0/0:27,0:26:53.90:0,54,975	0/0:19,0:19:48.54:0,49,1075	0/0:21,0:20:54.06:0,54,1076	0/0:32,0:32:43.54:0,44,622	0/1:19,0:19:89.71:90,0,340	0/1:30,0:29:99:127,0,610	0/1:14,0:12:40.26:40,0,213	1/1:15,0:14:9.82:299,10,0	1/1:14,2:15:20.95:180,21,0	1/1:47,0:43:30.93:502,31,0	0/0:18,0:17:36.07:0,36,846	0/0:18,0:18:39.06:0,39,683	0/0:27,0:27:63.06:0,63,1343	0/1:27,0:26:99:167,0,263	0/1:24,0:23:2.25:432,0,2	1/1:3,10:12:8.61:188,9,0	1/1:6,0:3:8.97:71,9,0
chr10	42018645	.	ACC	A	4760.44	PASS	AB=1.000;AC=33;AF=0.589;AN=56;BaseQRankSum=-3.074;DP=579;FS=1.686;HRun=4;HaplotypeScore=105.1647;InbreedingCoeff=0.9083;MQ=61.79;MQ0=14;MQRankSum=-0.888;QD=14.34;ReadPosRankSum=1.062;VQSLOD=1.3445;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:80.89:0,81,684	0/1:11,0:11:3.98:4,0,76	0/0:26,0:17:50.78:0,51,483	0/0:19,0:14:28.28:0,28,322	1/1:27,0:27:15.20:229,15,0	0/0:15,0:15:44.76:0,45,401	0/0:29,0:28:39.44:0,39,486	1/1:26,0:25:71.97:634,72,0	1/1:18,0:18:16.09:179,16,0	1/1:27,0:25:21.88:384,22,0	1/1:9,1:8:11.99:116,12,0	0/0:24,0:23:45.28:0,45,445	0/0:15,0:15:30.02:0,30,337	0/0:21,0:21:40.60:0,41,483	1/1:4,22:26:21.06:262,21,0	1/1:19,0:19:7.55:157,8,0	1/1:24,0:24:56.89:499,57,0	1/1:12,0:11:23.91:230,24,0	1/1:3,12:14:33.04:304,33,0	1/1:11,0:10:14.95:119,15,0	1/1:48,0:45:70.44:666,70,0	0/0:17,0:16:35.89:0,36,339	0/0:19,0:19:32.84:0,33,291	0/0:23,0:23:54.02:0,54,576	1/1:25,0:25:50.75:457,51,0	1/1:17,0:16:41.99:375,42,0	1/1:12,0:11:8.96:75,9,0	1/1:4,0:3:8.97:71,9,0
chr10	42018934	.	AG	A	6082.93	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=10.107;DP=623;FS=8.909;HRun=1;HaplotypeScore=62.3492;InbreedingCoeff=0.9983;MQ=74.66;MQ0=0;MQRankSum=1.895;QD=35.78;ReadPosRankSum=2.718;VQSLOD=4.7377;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:57.16:0,57,827	0/0:11,0:11:33.10:0,33,480	0/0:16,0:16:45.13:0,45,609	0/0:11,0:11:33.09:0,33,478	0/0:33,0:33:96.25:0,96,1395	1/1:0,30:30:69.23:964,69,0	1/1:0,18:18:51.17:713,51,0	0/0:33,0:33:99:0,99,1460	0/0:18,0:18:54.13:0,54,759	0/0:35,0:35:99:0,105,1571	0/0:14,0:14:42.14:0,42,635	1/1:0,19:19:45.15:629,45,0	1/1:0,30:30:87.29:1216,87,0	1/1:0,12:12:30.10:419,30,0	0/0:32,0:32:96.29:0,96,1406	0/0:24,0:24:72.22:0,72,1056	0/0:9,0:9:27.05:0,27,366	0/0:18,0:18:54.15:0,54,793	0/0:27,0:27:81.23:0,81,1156	0/0:36,0:36:99:0,105,1563	0/0:14,0:14:42.14:0,42,640	1/1:0,29:29:81.07:1058,81,0	1/1:0,25:25:60.20:832,60,0	1/1:0,7:7:18.06:252,18,0	0/0:33,0:33:99:0,99,1494	0/0:27,0:27:81.27:0,81,1221	0/0:31,0:31:90.26:0,90,1311	0/0:12,0:12:36.12:0,36,551
chr10	42019586	.	A	AG	993.18	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=0.467;DP=695;FS=6.112;HRun=8;HaplotypeScore=154.7192;InbreedingCoeff=0.9995;MQ=88.80;MQ0=0;MQRankSum=-4.194;QD=20.69;ReadPosRankSum=-0.300;VQSLOD=1.9695;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,26:29:66.20:762,66,0	0/0:13,0:13:36.01:0,36,329	0/0:34,0:34:75.72:0,76,638	0/0:26,0:26:30.36:0,30,276	0/0:26,0:26:60.01:0,60,549	0/0:25,0:26:67.96:0,68,586	0/0:17,0:17:41.97:0,42,366	0/0:29,0:29:56.99:0,57,521	0/0:26,0:26:69.02:0,69,631	0/0:20,0:20:48.02:0,48,439	0/0:16,0:17:41.06:0,41,363	0/0:28,0:28:78.01:0,78,701	0/0:27,0:27:67.38:0,67,599	0/0:30,0:30:79.27:0,79,705	0/0:42,0:42:99:0,108,988	0/0:19,0:19:51.03:0,51,467	1/1:13,0:19:42.90:353,43,0	0/0:18,0:18:42.01:0,42,384	0/0:21,0:21:47.24:0,47,431	0/0:31,0:31:48.43:0,48,604	0/0:30,0:30:81.03:0,81,741	0/0:20,0:20:56.90:0,57,501	0/0:24,0:24:63.50:0,64,571	0/0:23,0:23:60.02:0,60,541	0/0:24,0:25:53.02:0,53,466	0/0:22,0:22:60.02:0,60,549	0/0:40,0:38:99:0,102,928	0/0:13,0:13:33.01:0,33,302
chr10	42019596	.	TA	T	440.12	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.747;DP=688;FS=3.117;HRun=1;HaplotypeScore=145.6056;InbreedingCoeff=0.9995;MQ=88.21;MQ0=0;MQRankSum=-2.469;QD=25.89;ReadPosRankSum=-1.228;VQSLOD=3.2370;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:69.21:0,69,1063	0/0:14,0:14:42.14:0,42,666	0/0:34,1:35:76.95:0,77,1341	0/0:22,0:22:35.26:0,35,766	0/0:24,0:24:66.21:0,66,1031	0/0:26,0:26:78.27:0,78,1242	0/0:15,0:15:45.14:0,45,694	0/0:32,0:32:96.31:0,96,1511	0/0:28,0:28:84.26:0,84,1307	0/0:21,0:21:60.20:0,60,939	0/0:17,0:17:45.15:0,45,712	0/0:29,0:29:87.30:0,87,1388	0/0:25,0:25:75.19:0,75,1100	0/0:28,0:28:84.27:0,84,1304	0/0:39,0:39:99:0,117,1847	0/0:20,0:20:57.19:0,57,911	1/1:6,11:17:47.49:535,47,0	0/0:16,0:16:48.16:0,48,765	0/0:27,0:27:75.24:0,75,1171	0/0:28,0:28:84.29:0,84,1340	0/0:32,0:32:90.31:0,90,1432	0/0:21,0:21:63.20:0,63,968	0/0:23,0:23:69.21:0,69,1053	0/0:27,0:27:81.24:0,81,1241	0/0:22,0:22:66.22:0,66,1051	0/0:22,0:22:66.23:0,66,1055	0/0:40,0:39:99:0,117,1794	0/0:12,0:12:33.11:0,33,525
chr10	42021319	.	T	TA	11969.69	PASS	AB=1.000;AC=33;AF=0.589;AN=56;BaseQRankSum=-2.662;DP=641;FS=6.967;HRun=6;HaplotypeScore=70.9154;InbreedingCoeff=0.9500;MQ=68.79;MQ0=0;MQRankSum=-2.532;QD=31.09;ReadPosRankSum=-0.303;VQSLOD=5.1676;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,29:29:81.26:1019,81,0	0/0:10,0:10:30.07:0,30,306	0/0:16,0:14:24:0,24,302	0/1:12,0:12:2.88:3,0,172	0/0:43,0:43:99:0,117,1192	1/1:3,24:27:69.22:868,69,0	1/1:2,20:22:45.14:566,45,0	1/1:3,29:32:87.12:1000,87,0	0/0:22,0:22:57.10:0,57,573	0/0:20,0:20:54.12:0,54,551	0/0:23,0:23:66.13:0,66,666	1/1:1,20:21:57.18:711,57,0	1/1:3,19:22:51.15:629,51,0	1/1:2,13:15:39.12:491,39,0	0/0:21,0:21:60.14:0,60,612	0/0:24,0:24:72.16:0,72,735	0/0:26,0:26:69.15:0,69,703	0/0:20,0:20:51.11:0,51,518	1/1:1,15:16:48.15:597,48,0	1/1:3,30:33:87.28:1087,87,0	1/1:0,16:16:42.13:528,42,0	1/1:2,18:20:48.11:586,48,0	1/1:4,23:27:66.21:830,66,0	1/1:1,27:28:72.23:906,72,0	0/0:31,0:31:87.19:0,87,887	1/1:2,29:31:87.28:1093,87,0	1/1:2,26:28:66.21:830,66,0	1/1:0,6:6:18.06:226,18,0
chr10	42021776	.	G	GGGA	19983.98	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=19.601;DP=641;FS=15.910;HRun=0;HaplotypeScore=167.2509;InbreedingCoeff=0.9970;MQ=76.17;MQ0=0;MQRankSum=-19.488;QD=51.77;ReadPosRankSum=-0.333;VQSLOD=4.9188;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,24:33:72.20:1521,72,0	0/0:5,0:5:15.05:0,15,264	0/0:27,0:27:81.26:0,81,1366	0/0:18,0:18:48.12:0,48,789	0/0:24,0:24:72.25:0,72,1255	1/1:2,17:20:54.12:1128,54,0	1/1:5,12:19:42.14:909,42,0	1/1:11,17:28:72.25:1559,72,0	0/0:22,0:22:63.19:0,63,1051	0/0:36,0:36:99:0,108,1895	0/0:25,0:25:72.25:0,72,1266	1/1:3,22:27:63.22:1387,63,0	1/1:3,17:20:57.15:1212,57,0	1/1:1,23:24:69.24:1514,69,0	0/0:30,0:30:87.30:0,87,1531	0/0:26,0:26:78.27:0,78,1359	1/1:4,7:11:24.08:468,24,0	0/0:18,0:18:54.14:0,54,920	1/1:5,9:17:48.12:979,48,0	1/1:7,22:29:65.76:1154,66,0	1/1:7,11:19:30.02:621,30,0	1/1:6,33:40:99:2137,99,0	1/1:2,17:20:45.10:894,45,0	1/1:3,12:15:23.75:537,24,0	0/0:24,0:24:72.25:0,72,1270	1/1:2,24:30:84.21:1749,84,0	1/1:0,17:18:51.18:1137,51,0	1/1:0,16:16:48.16:1078,48,0
chr10	42022376	.	T	TG	15550.95	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=-1.185;DP=711;FS=0.294;HRun=4;HaplotypeScore=121.1110;InbreedingCoeff=0.9954;MQ=75.31;MQ0=0;MQRankSum=-1.968;QD=35.26;ReadPosRankSum=2.222;VQSLOD=3.5830;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,57:60:99:1883,138,0	0/0:13,0:13:39.11:0,39,442	0/0:16,0:16:33.09:0,33,372	0/0:15,0:15:28.32:0,28,334	0/0:37,0:37:99:0,108,1213	1/1:0,32:32:90.30:1231,90,0	1/1:1,19:20:54.18:737,54,0	1/1:2,19:21:54.17:724,54,0	0/0:32,0:32:87.25:0,87,986	0/0:30,0:30:84.23:0,84,945	0/0:17,0:17:48.10:0,48,522	1/1:0,21:21:60.20:821,60,0	1/1:2,35:37:99:1435,105,0	1/1:3,31:34:93.29:1253,93,0	0/0:31,0:31:87.23:0,87,977	0/0:26,0:26:72.19:0,72,807	0/0:21,0:21:57.16:0,57,646	0/0:9,0:9:27.06:0,27,296	1/1:6,20:26:60.19:801,60,0	1/1:3,25:28:72.24:980,72,0	1/1:1,26:27:72.24:983,72,0	1/1:0,18:18:54.18:738,54,0	1/1:1,21:22:54.18:738,54,0	1/1:4,26:30:78.26:1067,78,0	0/0:23,0:23:63.17:0,63,707	1/1:2,28:30:84.21:1095,84,0	1/1:4,24:27:66.22:902,66,0	1/1:1,6:7:12.04:164,12,0
chr10	42022633	.	CA	C	6980.06	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=13.416;DP=701;FS=6.108;HRun=1;HaplotypeScore=85.3550;InbreedingCoeff=0.9992;MQ=86.21;MQ0=0;MQRankSum=-7.256;QD=39.44;ReadPosRankSum=3.559;VQSLOD=5.4728;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,111,1750	0/0:15,0:15:45.15:0,45,720	0/0:24,0:24:68.42:0,68,1050	0/0:22,0:22:66.19:0,66,976	0/0:34,0:34:99:0,102,1628	1/1:0,20:20:60.20:838,60,0	1/1:0,20:20:57.19:797,57,0	0/0:26,0:26:78.25:0,78,1203	0/0:21,0:21:63.21:0,63,1004	0/0:32,0:32:93.31:0,93,1450	0/0:25,0:25:75.24:0,75,1176	1/1:1,19:20:60.19:818,60,0	1/1:0,23:23:60.07:838,60,0	1/1:0,21:21:54.18:755,54,0	0/0:38,0:38:99:0,114,1771	0/0:25,0:25:75.24:0,75,1177	0/0:27,0:27:81.25:0,81,1269	0/0:11,0:11:30.09:0,30,456	0/0:19,0:19:57.16:0,57,864	0/0:36,0:36:99:0,105,1651	0/0:36,0:36:99:0,108,1723	1/1:0,26:26:78.26:1090,78,0	1/1:0,17:17:51.17:712,51,0	1/1:0,30:30:81.27:1132,81,0	0/0:29,0:29:87.30:0,87,1388	0/0:26,0:26:78.26:0,78,1227	0/0:34,0:34:98.95:0,99,1577	0/0:7,0:7:21.07:0,21,336
chr10	42024415	.	TTATATA	T	4915.64	PASS	AB=0.925;AC=22;AF=0.393;AN=56;BaseQRankSum=-2.444;DP=521;FS=24.758;HRun=0;HaplotypeScore=168.5038;InbreedingCoeff=0.1127;MQ=69.15;MQ0=7;MQRankSum=-0.391;QD=15.03;ReadPosRankSum=4.551;VQSLOD=2.7851;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:33,6:40:99:521,0,170	0/0:14,0:14:36.12:0,36,1084	0/0:18,0:13:33.58:0,34,909	0/0:30,0:21:26.12:0,26,551	0/0:3,0:3:6.02:0,6,145	0/1:16,0:16:38.74:39,0,60	0/1:18,1:18:0.12:245,0,0	1/1:6,21:27:58.86:1137,59,0	0/0:2,0:2:3.01:0,3,48	0/0:20,0:20:54.17:0,54,1494	0/0:30,0:29:66.23:0,66,1893	0/1:12,1:13:35.32:277,0,35	0/1:21,1:21:87.67:496,0,88	0/1:14,0:14:51.89:52,0,96	0/0:38,0:38:96.29:0,96,2543	0/0:5,0:4:6.02:0,6,125	1/1:12,0:14:11.93:124,12,0	0/0:15,0:15:36.11:0,36,829	0/1:8,1:9:21.92:209,0,22	0/1:13,3:16:1.53:60,0,2	1/1:26,2:28:12.45:175,12,0	1/1:16,1:17:26.12:502,26,0	0/1:22,2:24:20.92:87,0,21	1/1:11,2:12:7.46:153,7,0	0/0:19,0:19:36.12:0,36,985	0/1:22,2:24:99:556,0,190	0/1:18,5:23:77.38:173,0,77	0/1:8,0:8:68.79:109,0,69
chr10	42024418	.	T	TACAC	2967.99	PASS	AB=0.725;AC=28;AF=0.500;AN=56;BaseQRankSum=4.584;DP=516;FS=16.250;HRun=0;HaplotypeScore=172.4759;InbreedingCoeff=0.6599;MQ=63.99;MQ0=7;MQRankSum=-7.754;QD=10.83;ReadPosRankSum=0.372;VQSLOD=2.3932;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:7.28:0,7,104	0/0:15,0:15:37.68:0,38,713	0/0:17,0:12:32.77:0,33,570	0/0:25,0:16:26.95:0,27,411	0/0:2,0:2:6.02:0,6,97	1/1:2,14:16:6.81:128,7,0	1/1:16,0:17:3.73:70,4,0	1/1:24,0:24:3.20:116,3,0	0/0:1,0:1:3.01:0,3,48	0/0:18,0:18:54.17:0,54,920	0/0:29,0:28:66.22:0,66,1131	1/1:10,1:13:9.63:145,10,0	1/1:17,7:24:31.29:565,31,0	1/1:6,9:16:13.78:316,14,0	0/0:43,0:43:95.86:0,96,1243	0/0:5,0:4:6.01:0,6,74	0/0:14,0:14:12.03:0,12,135	0/0:16,0:16:36.11:0,36,626	1/1:8,1:10:11.06:124,11,0	1/1:5,8:15:4.14:46,4,0	1/1:28,1:29:8.94:73,9,0	0/1:13,2:15:11.20:14,0,11	0/1:6,17:25:12.68:64,0,13	1/1:12,2:13:0.25:19,0,0	0/0:19,0:19:36.12:0,36,639	1/1:16,8:26:50.17:839,50,0	1/1:7,13:20:12.10:321,12,0	1/1:3,3:8:17.24:326,17,0
chr10	42024420	.	TATATAC	T	2504.17	PASS	AB=1.000;AC=18;AF=0.321;AN=56;BaseQRankSum=-1.720;DP=504;FS=32.735;HRun=0;HaplotypeScore=174.8150;InbreedingCoeff=-0.3429;MQ=61.56;MQ0=7;MQRankSum=1.499;QD=7.83;ReadPosRankSum=0.937;VQSLOD=0.7559;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:40,0:40:99:226,0,464	0/0:15,0:15:40.92:0,41,1006	0/0:17,0:12:33.57:0,34,645	0/0:22,0:13:26.67:0,27,398	0/0:2,0:2:6.02:0,6,96	0/1:17,0:17:12.77:13,0,132	0/1:17,0:16:99:125,0,123	0/1:24,0:24:52.09:654,0,52	0/0:1,0:1:2.99:0,3,24	0/0:18,0:18:51.18:0,51,1367	0/0:29,0:28:66.13:0,66,1729	0/1:13,0:13:99:150,0,112	0/1:24,0:23:99:260,0,313	0/1:15,0:15:23.39:23,0,241	0/0:42,0:42:90.28:0,90,2224	0/0:4,0:3:6.01:0,6,75	1/1:2,11:13:12.04:195,12,0	0/0:15,0:15:33.11:0,33,632	0/1:9,0:9:98.62:99,0,100	0/1:15,0:15:30.63:31,0,104	0/1:25,0:25:49.33:62,0,49	0/1:14,0:14:14.90:297,0,15	0/1:24,0:24:53.35:53,0,60	0/1:13,0:12:34.19:77,0,34	0/0:19,0:19:36.12:0,36,834	0/1:27,0:27:99:253,0,522	0/1:21,0:21:95.38:95,0,191	0/1:9,0:9:55:55,0,220
chr10	42024424	.	T	TCAC	2029.99	PASS	AB=0.926;AC=25;AF=0.463;AN=54;BaseQRankSum=2.906;DP=589;FS=3.858;HRun=0;HaplotypeScore=208.7662;InbreedingCoeff=0.1731;MQ=53.57;MQ0=7;MQRankSum=-1.294;QD=4.47;ReadPosRankSum=0.169;VQSLOD=2.1438;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:45,0:45:62.40:62,0,133	0/0:14,0:15:39.10:0,39,615	0/0:15,0:10:27.08:0,27,354	0/0:20,0:10:20.17:0,20,264	0/0:1,0:1:2.99:0,3,24	1/1:20,0:20:12.86:117,13,0	0/1:22,0:21:7.52:150,0,8	0/1:32,0:32:18.92:19,0,110	./.	0/1:6,0:19:18.78:19,0,200	0/0:13,0:29:6.32:0,6,394	1/1:17,0:17:8.29:108,8,0	1/1:31,0:30:19.82:203,20,0	1/1:20,0:20:4.31:140,4,0	0/1:13,1:42:99:282,0,347	0/0:3,0:2:3.01:0,3,39	0/0:13,0:13:10.40:0,10,60	0/0:9,0:16:22.22:0,22,363	0/1:12,0:11:35.43:63,0,35	1/1:18,0:18:10.23:112,10,0	0/1:32,0:32:3.36:44,0,3	0/1:20,0:20:7.18:20,0,7	0/1:31,0:31:0.91:66,0,1	0/1:18,0:17:2.32:19,0,2	0/0:7,0:22:3.52:0,4,215	1/1:35,0:35:23.63:445,24,0	0/1:28,0:27:6.19:160,0,6	1/1:12,0:12:16.39:173,16,0
chr10	42024748	.	A	AT	14641.68	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=6.438;DP=594;FS=6.173;HRun=4;HaplotypeScore=89.4765;InbreedingCoeff=0.9898;MQ=84.56;MQ0=0;MQRankSum=-4.383;QD=33.89;ReadPosRankSum=1.195;VQSLOD=5.1822;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,21:24:54.18:738,54,0	0/0:12,0:12:36.10:0,36,408	0/0:20,0:20:29.57:0,30,466	0/0:21,0:21:44.04:0,44,457	1/1:5,22:27:74.04:938,74,0	1/1:1,22:23:57.19:780,57,0	1/1:1,8:9:9.03:123,9,0	1/1:6,28:34:84.25:1113,84,0	1/1:3,13:16:42.14:547,42,0	0/0:27,0:27:75.21:0,75,850	0/0:19,0:19:54.15:0,54,613	1/1:1,21:22:48.16:650,48,0	1/1:0,29:29:66.22:903,66,0	1/1:1,27:28:78.26:1066,78,0	0/0:30,0:30:87.25:0,87,986	1/1:1,16:17:48.25:584,48,0	1/1:2,13:17:39.13:516,39,0	0/0:10,0:10:27.08:0,27,306	1/1:3,12:15:39.13:533,39,0	1/1:1,27:28:81.11:1017,81,0	1/1:1,13:14:36.12:492,36,0	1/1:0,13:13:39.13:532,39,0	1/1:4,27:31:72.24:984,72,0	1/1:0,10:10:30.10:410,30,0	0/0:23,0:23:57.16:0,57,644	1/1:1,22:23:32.18:827,32,0	1/1:1,33:34:96.32:1313,96,0	1/1:0,18:18:42.14:574,42,0
chr10	42025278	.	AC	A	9587.04	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=1.185;DP=690;FS=4.003;HRun=9;HaplotypeScore=153.9639;InbreedingCoeff=0.9781;MQ=78.09;MQ0=1;MQRankSum=-0.159;QD=20.10;ReadPosRankSum=4.173;VQSLOD=3.4941;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,46:52:99:1234,135,0	0/0:8,0:8:21.06:0,21,242	0/0:18,0:19:19.92:0,20,301	0/0:28,0:28:49.09:0,49,534	1/1:4,0:37:65.37:193,65,0	1/1:1,25:26:75.04:685,75,0	1/1:0,23:23:69.04:631,69,0	0/0:27,1:28:51.14:0,51,579	1/1:1,0:21:36.67:108,37,0	1/1:5,29:34:89.99:811,90,0	1/1:4,14:18:39.01:356,39,0	1/1:2,22:24:60.03:549,60,0	1/1:1,24:25:69.04:631,69,0	1/1:1,25:26:75.03:686,75,0	1/1:3,31:34:87.04:796,87,0	1/1:2,0:34:61.11:180,61,0	1/1:3,30:34:89.08:802,89,0	1/1:0,9:9:21.01:192,21,0	0/0:9,0:9:18.05:0,18,208	0/0:27,0:27:49.99:0,50,700	0/0:26,0:26:69.08:0,69,734	1/1:3,22:25:60.03:546,60,0	1/1:2,14:16:39.02:357,39,0	1/1:2,20:22:54.02:494,54,0	1/1:1,14:16:38.03:335,38,0	0/0:24,2:26:5.23:0,5,559	0/0:31,0:30:81.04:0,81,892	0/0:11,0:11:21.06:0,21,242
chr10	42025554	.	G	GTA	11099.55	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=17.658;DP=514;FS=12.295;HRun=0;HaplotypeScore=165.9023;InbreedingCoeff=0.9909;MQ=88.89;MQ0=0;MQRankSum=-17.202;QD=33.84;ReadPosRankSum=3.767;VQSLOD=6.2999;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,13:15:39.10:441,39,0	0/0:10,0:10:30.10:0,30,489	0/0:28,0:28:74.99:0,75,1152	0/0:25,0:25:54.53:0,55,962	1/1:0,20:24:60.17:698,60,0	1/1:0,18:20:57.18:689,57,0	1/1:1,18:18:51.16:644,51,0	1/1:5,13:18:45.15:652,45,0	1/1:0,12:12:36.11:435,36,0	0/0:43,0:43:99:0,123,1977	0/0:25,0:25:75.25:0,75,1203	1/1:0,15:16:48.14:566,48,0	1/1:0,14:15:45.13:525,45,0	1/1:0,18:19:57.13:652,57,0	0/0:26,0:26:78.25:0,78,1248	1/1:0,22:22:66.21:805,66,0	1/1:0,5:5:12.04:141,12,0	0/0:8,0:8:24.04:0,24,362	1/1:1,12:13:39.13:544,39,0	1/1:0,22:23:63.19:745,63,0	1/1:0,5:6:15.04:172,15,0	1/1:0,20:19:54.16:621,54,0	1/1:1,17:18:48.14:575,48,0	1/1:0,10:10:27.07:299,27,0	0/0:21,0:21:60.19:0,60,955	1/1:1,19:20:60.18:767,60,0	1/1:4,22:26:72.20:857,72,0	1/1:0,7:7:21.07:273,21,0
chr10	42025555	.	ACCCCTT	A	15532.48	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=17.294;DP=509;FS=10.333;HRun=0;HaplotypeScore=187.9562;InbreedingCoeff=0.9930;MQ=88.48;MQ0=0;MQRankSum=-17.469;QD=47.94;ReadPosRankSum=3.235;VQSLOD=4.1601;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,13:14:36.12:609,36,0	0/0:10,0:10:30.10:0,30,1065	0/0:27,0:27:78.20:0,78,2684	0/0:25,0:25:74.55:0,75,2250	1/1:4,20:24:63.12:989,63,0	1/1:1,18:19:57.18:966,57,0	1/1:1,18:18:54.02:828,54,0	1/1:0,18:18:53.55:838,54,0	1/1:0,12:12:36.12:628,36,0	0/0:42,0:42:99:0,123,4583	0/0:26,0:26:78.27:0,78,2934	1/1:1,15:16:48.16:820,48,0	1/1:1,14:15:45.15:766,45,0	1/1:1,18:19:57.19:957,57,0	0/0:26,0:26:78.27:0,78,2944	1/1:0,22:22:66.23:1159,66,0	1/1:0,5:5:15.01:225,15,0	0/0:8,0:8:21.07:0,21,764	1/1:1,12:13:38.34:683,38,0	1/1:1,22:23:66.18:1103,66,0	1/1:1,5:6:15.05:253,15,0	1/1:0,20:19:57.11:927,57,0	1/1:1,17:18:54.01:817,54,0	1/1:0,10:10:27.09:444,27,0	0/0:21,0:21:63.22:0,63,2353	1/1:0,19:19:57.20:1047,57,0	1/1:3,22:25:66.85:1090,67,0	1/1:0,7:7:21.07:385,21,0
chr10	42025560	.	T	TA	7651.08	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=17.938;DP=522;FS=12.408;HRun=0;HaplotypeScore=172.1054;InbreedingCoeff=0.9903;MQ=85.94;MQ0=0;MQRankSum=-16.989;QD=22.64;ReadPosRankSum=2.596;VQSLOD=4.4742;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:14:38.92:322,39,0	0/0:9,0:9:27.09:0,27,378	0/0:26,0:26:72.22:0,72,981	0/0:23,0:23:53.56:0,54,788	1/1:25,0:25:59.70:457,60,0	1/1:19,0:19:56.93:483,57,0	1/1:19,0:18:47.89:388,48,0	1/1:18,0:18:45.03:405,45,0	1/1:12,0:12:35.95:296,36,0	0/0:44,0:44:99:0,126,1728	0/0:27,0:27:78.26:0,78,1090	1/1:18,0:18:50.93:440,51,0	1/1:15,3:18:47.63:373,48,0	1/1:19,1:20:59.79:466,60,0	0/0:27,0:27:81.27:0,81,1132	1/1:23,0:23:68.73:554,69,0	1/1:7,0:7:11.98:99,12,0	0/0:7,0:7:18.06:0,18,252	1/1:12,0:12:36.04:331,36,0	1/1:25,0:25:68.83:550,69,0	1/1:6,0:6:14.95:117,15,0	1/1:21,0:20:59.82:474,60,0	1/1:17,0:17:47.77:360,48,0	1/1:10,0:10:26.87:202,27,0	0/0:21,0:21:63.19:0,63,862	1/1:19,2:21:63.01:553,63,0	1/1:22,0:22:62.80:504,63,0	1/1:11,0:11:32.97:280,33,0
chr10	42025724	.	ATCTATCTTTCTT	A	6870.96	PASS	AB=1.000;AC=26;AF=0.464;AN=56;BaseQRankSum=5.941;DP=613;FS=0.841;HRun=0;HaplotypeScore=216.5955;InbreedingCoeff=0.6687;MQ=52.30;MQ0=7;MQRankSum=-4.349;QD=22.83;ReadPosRankSum=-1.222;VQSLOD=3.9614;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:18:14.87:234,15,0	0/0:13,0:13:39.11:0,39,1884	0/0:24,0:13:24.08:0,24,547	0/0:17,0:13:39:0,39,762	0/0:31,0:31:76.66:0,77,979	1/1:16,0:16:14.20:68,14,0	1/1:10,0:10:2.40:13,2,0	1/1:4,36:40:99:1395,108,0	0/0:27,0:27:51.13:0,51,864	0/0:31,0:31:78.26:0,78,3204	0/0:25,0:25:72.25:0,72,3312	0/1:21,0:19:99:236,0,259	1/1:19,0:18:16.13:80,16,0	0/1:22,0:21:99:213,0,331	0/0:26,0:26:63.21:0,63,3065	0/0:21,0:21:21.07:0,21,381	0/1:14,0:14:35.93:64,0,36	0/0:22,0:21:57.19:0,57,2223	1/1:1,10:11:27.04:618,27,0	1/1:3,22:25:44.79:992,45,0	0/1:11,0:11:8.39:136,0,8	1/1:21,0:21:20.02:117,20,0	0/0:29,0:28:24.82:0,25,332	0/0:12,0:10:6.02:0,6,96	0/0:34,0:34:87.24:0,87,3462	1/1:4,22:26:63.15:1464,63,0	1/1:0,32:32:24.08:803,24,0	1/1:1,12:13:12.04:439,12,0
chr10	42025728	.	ATCTT	A	5454.26	PASS	AB=1.000;AC=37;AF=0.661;AN=56;BaseQRankSum=12.786;DP=592;FS=1.325;HRun=0;HaplotypeScore=145.6313;InbreedingCoeff=0.6789;MQ=50.93;MQ0=7;MQRankSum=-6.442;QD=13.37;ReadPosRankSum=3.683;VQSLOD=4.6780;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:20:14.15:102,14,0	0/0:13,0:13:36:0,36,765	0/0:21,0:10:24.01:0,24,248	0/0:18,0:14:32.20:0,32,420	1/1:4,26:30:44.10:757,44,0	1/1:2,0:17:17.96:159,18,0	1/1:2,0:11:5.93:45,6,0	0/1:36,0:36:51.13:328,0,51	1/1:2,24:26:48.12:814,48,0	0/0:29,0:29:58.83:0,59,1425	0/0:26,0:26:75.18:0,75,1463	1/1:12,8:18:36.03:444,36,0	1/1:2,0:18:17.27:168,17,0	1/1:12,8:20:45.03:546,45,0	0/0:23,0:23:60.18:0,60,1356	1/1:0,17:17:21:340,21,0	1/1:14,0:14:3.01:35,3,0	0/0:22,0:21:57:0,57,995	1/1:10,0:10:8.11:135,8,0	0/1:24,0:24:27.87:162,0,28	1/1:11,0:11:8.77:73,9,0	1/1:1,0:20:26.72:223,27,0	1/1:3,26:28:23.50:393,24,0	1/1:1,12:11:6.02:107,6,0	0/0:32,0:32:78.17:0,78,1317	0/1:23,0:23:58.55:295,0,59	1/1:32,0:31:23.95:214,24,0	1/1:13,0:13:12.01:112,12,0
chr10	42025732	.	TTCTTTCTATCTATCTA	T	1214.37	PASS	AB=1.000;AC=14;AF=0.250;AN=56;BaseQRankSum=7.134;DP=587;FS=0.502;HRun=0;HaplotypeScore=261.0937;InbreedingCoeff=0.1581;MQ=50.65;MQ0=8;MQRankSum=-5.301;QD=5.33;ReadPosRankSum=2.588;VQSLOD=2.2744;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:21:14.89:183,0,15	0/0:12,0:12:36.11:0,36,2379	0/0:19,0:9:27.03:0,27,559	0/0:20,0:16:41.23:0,41,868	0/0:28,0:29:60.93:0,61,1759	0/0:16,0:15:18.06:0,18,321	0/0:9,0:9:6.02:0,6,93	0/1:36,0:36:99:238,0,590	0/0:26,0:26:48.10:0,48,1708	0/0:30,0:30:87.25:0,87,4328	0/0:25,0:25:75.22:0,75,4222	0/1:20,0:18:85.85:86,0,818	0/0:18,0:17:19:0,19,340	0/1:21,0:20:49.83:50,0,1011	0/0:23,0:23:66.20:0,66,3925	0/0:18,0:18:24.08:0,24,809	1/1:1,13:14:3.01:140,3,0	0/0:23,0:22:66.04:0,66,2854	0/1:10,0:10:48.49:48,0,133	0/1:23,0:23:99:188,0,244	0/1:13,0:13:35.85:54,0,36	0/0:19,0:19:8.99:0,9,388	0/0:26,0:25:24.83:0,25,887	0/0:12,0:11:6.02:0,6,244	0/0:34,0:34:96.30:0,96,4650	0/1:22,0:22:99:157,0,281	1/1:32,0:31:23.62:155,24,0	1/1:14,0:13:11.85:79,12,0
chr10	42025860	.	TG	T	3487.09	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-2.623;DP=674;FS=0.863;HRun=2;HaplotypeScore=102.5336;InbreedingCoeff=0.9969;MQ=65.56;MQ0=1;MQRankSum=2.070;QD=34.53;ReadPosRankSum=1.482;VQSLOD=3.6337;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:16:45.14:0,45,635	0/0:17,0:17:51.17:0,51,763	0/0:16,0:16:39.10:0,39,508	0/0:10,0:10:18.05:0,18,233	1/1:0,40:40:99:1424,117,0	0/0:27,0:26:69.22:0,69,1014	0/0:15,0:15:36.12:0,36,538	0/0:31,0:29:87.27:0,87,1263	1/1:0,28:28:72.23:934,72,0	0/0:28,0:28:84.26:0,84,1206	0/0:19,0:19:57.19:0,57,854	0/0:23,0:22:66.20:0,66,947	0/0:22,0:22:66.18:0,66,958	0/0:27,0:27:75.25:0,75,1117	0/0:24,0:24:69.20:0,69,992	1/1:0,33:33:87.28:1129,87,0	0/0:11,0:11:33.11:0,33,487	0/0:11,0:11:33.07:0,33,463	0/0:24,0:24:72.15:0,72,1029	0/0:46,0:46:99:0,138,2005	0/0:30,0:30:78.25:0,78,1144	0/0:17,0:17:48.12:0,48,692	0/0:24,0:24:72.23:0,72,1049	0/0:20,0:19:54.18:0,54,808	0/0:33,0:33:96.33:0,96,1436	0/0:26,0:26:78.24:0,78,1125	0/0:31,0:30:93.31:0,93,1389	0/0:23,0:23:66.22:0,66,987
chr10	42026714	.	A	AGTGTGT	20217.42	PASS	AB=1.000;AC=35;AF=0.625;AN=56;BaseQRankSum=3.153;DP=793;FS=1.099;HRun=0;HaplotypeScore=222.5988;InbreedingCoeff=0.9505;MQ=62.94;MQ0=7;MQRankSum=-12.486;QD=40.19;ReadPosRankSum=-3.551;VQSLOD=4.0695;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:23,8:30:37.66:1057,38,0	0/0:10,0:10:24.08:0,24,510	0/1:47,0:35:1.67:2,0,924	0/0:49,0:39:41.62:0,42,734	0/0:29,0:28:55.53:0,56,335	1/1:10,12:26:42.14:1206,42,0	1/1:18,6:25:51.15:1407,51,0	1/1:26,10:38:38.48:1083,38,0	0/0:28,0:27:31.76:0,32,230	0/0:37,0:37:99:0,99,2083	0/0:23,0:24:63.21:0,63,1272	1/1:8,20:29:57.20:1883,57,0	1/1:10,11:23:42.14:1393,42,0	1/1:10,9:24:31.68:971,32,0	0/0:38,0:39:81.26:0,81,1654	0/0:31,0:31:52.99:0,53,348	1/1:10,0:22:25.10:487,25,0	0/0:16,0:16:24.40:0,24,479	1/1:11,11:25:48.15:1215,48,0	1/1:10,17:28:51.18:1670,51,0	1/1:16,0:33:18.06:341,18,0	1/1:14,17:31:42.14:1372,42,0	1/1:6,11:19:27.09:894,27,0	1/1:14,5:19:16.55:439,17,0	0/0:26,0:27:66.21:0,66,1349	1/1:15,15:31:63.20:1845,63,0	1/1:10,22:32:69.24:2270,69,0	1/1:6,5:11:21.07:683,21,0
chr10	42026721	.	G	GTA	4661.24	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=11.854;DP=814;FS=12.341;HRun=0;HaplotypeScore=215.2775;InbreedingCoeff=-0.0173;MQ=60.26;MQ0=7;MQRankSum=-10.136;QD=10.20;ReadPosRankSum=9.928;VQSLOD=2.3022;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:28:13.10:59,0,13	0/0:9,0:9:27.08:0,27,391	0/0:56,0:40:94.88:0,95,1296	0/0:52,0:41:88.45:0,88,1056	1/1:2,31:32:72.15:1386,72,0	0/1:22,0:22:21.18:57,0,21	0/1:27,0:27:26.27:26,0,92	0/0:39,0:38:3.46:0,3,462	1/1:0,24:23:54.19:1037,54,0	0/0:38,0:38:99:0,114,1655	0/0:25,0:25:75.15:0,75,1031	0/1:28,0:28:46.97:90,0,47	0/1:24,0:24:26.08:58,0,26	0/1:23,0:23:4.89:37,0,5	0/0:43,0:43:99:0,111,1435	1/1:0,32:33:75.26:1442,75,0	0/1:20,0:20:32.34:61,0,32	0/0:16,0:16:44.61:0,45,509	0/1:26,0:26:49.84:50,0,243	0/1:27,0:26:4.82:94,0,5	0/0:38,0:37:14.75:0,15,173	0/1:28,0:28:53.35:71,0,53	0/1:22,0:22:20.44:52,0,20	1/1:18,0:18:0.69:20,1,0	0/0:29,0:29:81.17:0,81,1106	0/1:36,0:33:23.59:24,0,267	0/1:36,0:34:94.47:97,0,94	0/0:12,0:12:3.91:0,4,65
chr10	42026828	.	T	TATAG	1706.96	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=1.132;DP=747;FS=1.022;HRun=0;HaplotypeScore=246.3499;InbreedingCoeff=-0.0942;MQ=53.62;MQ0=7;MQRankSum=-1.829;QD=2.98;ReadPosRankSum=-2.230;VQSLOD=1.9717;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:35,0:35:52.19:52,0,89	0/1:16,0:16:99:122,0,261	0/0:37,0:28:20.92:0,21,467	0/0:27,0:21:32.93:0,33,408	1/1:30,0:30:3.34:25,3,0	0/0:23,0:23:8.84:0,9,59	1/1:17,0:17:2.06:23,2,0	1/1:35,0:32:11.89:97,12,0	1/1:33,0:33:10.97:106,11,0	0/0:45,0:45:30.15:0,30,1281	0/1:28,0:28:2.05:2,0,387	0/1:27,0:27:18.33:106,0,18	0/1:28,0:26:39.03:70,0,39	0/0:23,0:22:15.78:0,16,118	0/1:40,0:40:99:113,0,184	1/1:24,0:24:3.48:37,3,0	0/1:13,0:13:29.99:30,0,51	0/1:9,0:9:11.41:11,0,111	0/1:21,0:20:60.05:60,0,90	1/1:17,21:37:14.52:310,15,0	0/1:21,0:21:1.95:75,0,2	0/1:27,0:27:59.44:63,0,59	0/1:22,0:22:32.92:33,0,47	0/1:25,0:25:13.37:23,0,13	0/1:30,0:30:8.09:8,0,466	0/1:26,0:26:43.15:43,0,119	1/1:23,4:27:31.17:471,31,0	0/0:20,0:20:14.99:0,15,317
chr10	42026838	.	TAGAC	T	6422.93	PASS	AB=0.995;AC=34;AF=0.607;AN=56;BaseQRankSum=0.126;DP=703;FS=18.659;HRun=0;HaplotypeScore=224.5049;InbreedingCoeff=0.4044;MQ=50.32;MQ0=11;MQRankSum=-1.906;QD=13.16;ReadPosRankSum=0.547;VQSLOD=3.1403;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:25,6:31:41.80:396,42,0	0/0:16,0:16:47.06:0,47,651	0/0:31,0:17:32.19:0,32,432	0/0:22,0:13:20.69:0,21,276	0/1:28,0:28:9.76:215,0,10	1/1:14,5:19:38.90:365,39,0	1/1:13,1:14:27.37:220,27,0	1/1:28,0:24:50.18:388,50,0	1/1:35,0:35:77.04:536,77,0	0/0:46,0:46:94.11:0,94,1357	0/0:28,0:28:35.93:0,36,358	1/1:20,6:26:56.33:505,56,0	1/1:13,10:21:46.24:414,46,0	1/1:15,6:20:47.23:502,47,0	0/0:39,0:39:41.73:0,42,482	1/1:33,0:32:47.96:425,48,0	1/1:12,1:13:16.89:148,17,0	0/1:9,0:9:43.09:43,0,77	0/1:20,0:19:99:269,0,117	0/1:36,0:35:85.66:86,0,179	0/1:20,0:20:35.71:180,0,36	1/1:20,4:25:56.92:530,57,0	1/1:12,6:18:46.34:398,46,0	1/1:21,2:23:19.72:161,20,0	0/0:33,0:33:38.39:0,38,378	0/1:24,1:25:99:383,0,175	0/1:24,0:23:75.79:201,0,76	0/1:17,0:17:58.83:59,0,478
chr10	42026848	.	GATAGATAC	G	7048.33	PASS	AB=1.000;AC=39;AF=0.696;AN=56;BaseQRankSum=-9.020;DP=713;FS=30.206;HRun=0;HaplotypeScore=271.2693;InbreedingCoeff=-0.3080;MQ=48.81;MQ0=12;MQRankSum=1.447;QD=10.57;ReadPosRankSum=-5.800;VQSLOD=1.3604;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:30:17.71:487,18,0	0/1:16,0:16:59:59,0,541	0/1:24,0:9:9:39,0,9	0/1:22,0:10:20.15:20,0,21	0/1:27,0:27:99:198,0,136	1/1:17,5:21:34.80:459,35,0	1/1:14,1:15:23.95:242,24,0	1/1:22,0:19:30.90:195,31,0	0/1:33,0:33:17.55:299,0,18	0/1:48,0:48:99:307,0,309	0/1:28,0:28:64.31:73,0,64	1/1:17,6:22:39.05:548,39,0	1/1:15,10:23:41.54:605,42,0	1/1:24,0:24:44.78:795,45,0	0/0:46,0:46:5.06:0,5,416	0/1:36,0:35:99:240,0,274	1/1:13,1:14:18.42:176,18,0	1/1:9,0:9:1.97:89,2,0	0/1:16,0:15:99:104,0,332	0/1:33,0:32:58.88:59,0,336	0/1:21,0:21:99:179,0,211	1/1:22,0:22:49.97:652,50,0	1/1:12,6:18:38.79:473,39,0	1/1:29,2:31:29.56:283,30,0	0/1:39,0:39:99:100,0,132	0/1:25,0:25:99:220,0,601	0/1:23,0:22:99:110,0,272	0/1:21,0:20:39:39,0,1111
chr10	42026852	.	GATAC	G	7309.46	PASS	AB=1.000;AC=42;AF=0.750;AN=56;BaseQRankSum=-7.016;DP=709;FS=17.566;HRun=0;HaplotypeScore=237.9373;InbreedingCoeff=-0.3132;MQ=48.33;MQ0=14;MQRankSum=0.972;QD=10.31;ReadPosRankSum=-7.597;VQSLOD=0.9207;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:27,6:33:47.84:451,48,0	0/1:16,0:16:80.89:81,0,184	0/1:25,0:5:9:39,0,9	0/1:22,0:9:13.46:20,0,13	0/1:27,0:27:8.64:215,0,9	1/1:22,0:21:40.47:372,40,0	1/1:15,0:15:27.81:226,28,0	1/1:23,0:20:41.67:299,42,0	1/1:35,0:35:71.02:485,71,0	0/1:40,0:40:56.90:374,0,57	0/1:27,0:27:20.83:132,0,21	1/1:24,0:23:44.46:410,44,0	1/1:27,0:25:42.72:391,43,0	1/1:17,7:24:47.62:519,48,0	0/1:43,0:43:75.99:76,0,138	1/1:38,0:37:50.77:446,51,0	1/1:16,0:16:23.39:194,23,0	1/1:8,0:8:20.82:150,21,0	0/1:13,0:12:99:130,0,140	0/1:32,0:31:99:109,0,174	0/1:21,0:21:27.23:247,0,27	1/1:16,5:21:53.92:503,54,0	1/1:19,0:19:41.51:364,42,0	1/1:32,0:32:31.70:258,32,0	0/1:36,0:36:3.15:188,0,3	0/1:25,0:25:99:379,0,157	0/1:23,0:22:78.26:154,0,78	0/1:22,0:21:97.70:98,0,471
chr10	42026948	.	AGT	A	11265.38	PASS	AB=1.000;AC=33;AF=0.589;AN=56;BaseQRankSum=7.137;DP=831;FS=0.638;HRun=0;HaplotypeScore=179.6658;InbreedingCoeff=0.9548;MQ=53.63;MQ0=10;MQRankSum=-1.477;QD=22.31;ReadPosRankSum=3.686;VQSLOD=5.3296;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:14,16:30:57.13:691,57,0	0/0:13,0:13:33.07:0,33,483	0/0:35,0:18:29.54:0,30,472	0/0:40,0:28:47.19:0,47,620	0/0:31,0:31:46.53:0,47,1095	1/1:12,10:22:44.27:555,44,0	1/1:4,20:24:36.12:458,36,0	1/1:12,29:39:76.90:1027,77,0	0/0:18,0:18:33.11:0,33,523	0/0:36,0:35:61.13:0,61,1432	0/0:26,0:26:63.17:0,63,958	1/1:6,28:34:63.20:791,63,0	1/1:5,33:38:72.16:916,72,0	1/1:3,20:23:33.10:420,33,0	0/0:37,0:37:64.35:0,64,1539	0/0:29,0:28:39.29:0,39,842	0/1:27,0:27:1.94:2,0,111	0/0:15,0:15:36.59:0,37,574	1/1:3,11:12:32.94:390,33,0	1/1:2,13:15:27.09:344,27,0	1/1:7,56:63:84.02:1069,84,0	1/1:3,21:24:48.15:610,48,0	1/1:1,22:23:38.84:496,39,0	1/1:20,18:38:81.69:1008,82,0	0/0:44,0:43:99:0,114,1773	1/1:4,29:33:81.14:965,81,0	1/1:17,16:32:72.19:876,72,0	1/1:5,18:23:51.16:648,51,0
chr10	42027078	.	C	CAGATAGAT	8419.89	PASS	AB=0.791;AC=43;AF=0.796;AN=54;BaseQRankSum=3.345;DP=766;FS=13.199;HRun=0;HaplotypeScore=244.4656;InbreedingCoeff=0.4908;MQ=50.04;MQ0=16;MQRankSum=-2.689;QD=12.46;ReadPosRankSum=-0.793;VQSLOD=2.1574;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:26:24.41:195,24,0	0/0:18,0:18:18.06:0,18,350	./.	0/1:29,0:21:0:0,0,0	0/1:21,0:21:0:0,0,1	0/0:20,0:17:18:0,18,341	0/0:15,0:14:15.05:0,15,339	1/1:39,0:28:3.01:41,3,0	1/1:17,0:17:9.03:311,9,0	1/1:25,0:43:59.94:602,60,0	1/1:7,0:17:20.97:181,21,0	1/1:16,9:25:13.86:492,14,0	1/1:20,14:34:24.02:762,24,0	1/1:20,6:25:21.07:755,21,0	0/1:21,0:39:36.72:221,0,37	1/1:35,0:35:26.61:231,27,0	1/1:23,0:21:14.99:237,15,0	1/1:13,0:19:21.42:171,21,0	1/1:8,2:10:6.02:163,6,0	1/1:8,10:18:15.03:511,15,0	1/1:29,5:34:11.01:115,11,0	0/1:15,0:31:39.86:239,0,40	1/1:14,9:23:12.02:341,12,0	1/1:33,1:35:16.96:269,17,0	0/1:18,0:53:99:499,0,124	1/1:20,6:22:24.07:628,24,0	1/1:11,8:19:12.02:389,12,0	1/1:5,9:16:27.09:1067,27,0
chr10	42027178	.	A	ATG	4084.70	PASS	AB=0.940;AC=36;AF=0.643;AN=56;BaseQRankSum=3.411;DP=725;FS=11.060;HRun=0;HaplotypeScore=205.4745;InbreedingCoeff=0.6500;MQ=43.43;MQ0=38;MQRankSum=0.223;QD=8.67;ReadPosRankSum=-1.302;VQSLOD=2.3112;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:38,1:34:10.45:209,10,0	0/0:22,0:22:48.11:0,48,575	0/0:54,0:16:23.17:0,23,204	0/0:52,0:11:20.26:0,20,210	1/1:22,0:23:2.84:23,3,0	1/1:17,0:16:14.97:207,15,0	1/1:16,0:15:19.12:291,19,0	0/1:34,1:21:50.11:124,0,50	1/1:26,0:28:20.98:214,21,0	0/0:27,0:25:60.66:0,61,766	0/0:22,0:22:10.43:0,10,185	1/1:22,1:22:23.05:186,23,0	1/1:27,2:27:22.40:262,22,0	1/1:32,1:31:39.97:392,40,0	0/0:31,0:31:66.21:0,66,847	1/1:26,0:26:15.03:158,15,0	1/1:4,18:21:27.62:455,28,0	0/0:15,0:15:33.08:0,33,414	1/1:16,0:7:14.95:154,15,0	0/1:18,1:18:0.93:214,0,1	1/1:35,2:35:23.29:321,23,0	1/1:18,0:17:14.46:119,14,0	0/1:17,1:18:9.86:99,0,10	1/1:31,1:29:9.65:108,10,0	0/0:31,0:31:60.78:0,61,786	1/1:29,0:27:50.76:425,51,0	1/1:3,0:3:2.68:11,3,0	0/1:7,1:8:15.09:115,0,15
chr10	42027182	.	G	GTA	1358.61	PASS	AB=0.998;AC=23;AF=0.411;AN=56;BaseQRankSum=4.068;DP=713;FS=0.983;HRun=0;HaplotypeScore=214.5830;InbreedingCoeff=-0.1281;MQ=41.61;MQ0=35;MQRankSum=0.881;QD=2.93;ReadPosRankSum=-2.822;VQSLOD=2.4852;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:37,0:32:45.64:46,0,66	0/0:22,0:22:54.14:0,54,776	0/0:49,0:14:15.27:0,15,324	0/0:50,0:10:30.06:0,30,379	1/1:11,12:24:5.84:52,6,0	0/1:20,0:18:15.36:76,0,15	0/1:15,0:14:22.66:107,0,23	0/1:34,0:20:0.74:1,0,261	1/1:7,20:28:21.14:275,21,0	0/0:28,0:26:69.16:0,69,990	0/0:21,0:21:13.61:0,14,245	0/1:23,0:23:23.57:24,0,106	0/1:27,0:25:58.06:58,0,89	0/1:31,0:30:65.33:65,0,104	0/0:33,0:33:72.11:0,72,1058	1/1:7,19:26:0.39:196,0,0	0/1:22,0:21:7.12:216,0,7	0/0:14,0:14:39:0,39,540	0/1:15,0:7:0.10:33,0,0	0/1:21,0:20:54.54:79,0,55	0/1:37,0:34:20.54:118,0,21	0/1:19,0:18:8.67:9,0,61	0/1:16,0:16:32.10:32,0,55	1/1:31,0:28:1.11:43,1,0	0/0:30,0:30:65.25:0,65,999	0/1:27,0:25:65.80:66,0,99	0/0:3,0:3:1.24:0,1,3	0/1:9,0:8:25.61:26,0,57
chr10	42027197	.	T	TGTGA	351.80	PASS	AB=1.000;AC=10;AF=0.179;AN=56;BaseQRankSum=6.942;DP=675;FS=7.419;HRun=0;HaplotypeScore=244.8771;InbreedingCoeff=0.4362;MQ=39.70;MQ0=27;MQRankSum=-4.853;QD=2.67;ReadPosRankSum=2.984;VQSLOD=1.1661;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:30:12.46:0,12,202	0/0:20,0:20:47.45:0,47,720	0/0:29,0:10:21:0,21,275	0/0:38,0:5:14.97:0,15,230	1/1:28,0:27:1.89:4,2,0	0/0:22,0:20:2.13:0,2,34	0/0:18,0:16:9.60:0,10,78	0/0:29,0:17:27.90:0,28,275	1/1:20,5:25:16.40:287,16,0	0/0:26,0:26:65.79:0,66,944	0/0:19,0:19:11.69:0,12,174	0/1:21,0:20:11.15:11,0,209	0/0:29,0:25:24.28:0,24,215	0/0:31,0:29:45.77:0,46,498	0/0:34,0:34:65.86:0,66,998	1/1:24,1:25:11.02:168,11,0	0/1:23,0:22:4.57:5,0,188	0/0:12,0:12:32.29:0,32,473	0/0:13,0:7:11.46:0,11,111	0/0:21,0:18:12.45:0,12,157	0/0:38,0:33:24.44:0,24,171	0/0:18,0:16:11.48:0,11,147	0/0:15,0:15:4.17:0,4,60	0/0:36,0:32:4.27:0,4,67	0/0:33,0:33:45.78:0,46,912	0/0:29,0:27:4.08:0,4,301	0/1:4,0:4:0.08:1,0,0	0/1:6,0:5:1.66:2,0,84
chr10	42027201	.	T	TGC	428.59	PASS	AB=0.975;AC=17;AF=0.304;AN=56;BaseQRankSum=7.158;DP=681;FS=30.231;HRun=0;HaplotypeScore=234.2470;InbreedingCoeff=0.0373;MQ=39.98;MQ0=23;MQRankSum=-2.853;QD=1.29;ReadPosRankSum=-0.742;VQSLOD=1.2514;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:34,0:31:5.81:78,6,0	0/1:21,0:21:73.22:73,0,514	0/0:24,0:8:21.06:0,21,272	0/0:34,0:5:15.05:0,15,226	0/0:31,0:30:0.23:0,0,0	0/0:21,1:20:2.94:0,3,18	0/0:17,0:15:1.02:0,1,16	0/1:28,0:20:44.47:62,0,44	0/1:26,0:26:4.90:22,0,5	0/0:27,0:27:60.71:0,61,799	0/0:19,0:19:0.20:0,0,141	1/1:19,2:20:6.73:58,7,0	0/1:29,1:26:5.88:6,0,45	0/1:34,1:33:1.37:1,0,150	0/0:33,0:33:21.54:0,22,810	1/1:23,0:23:1.65:40,2,0	0/1:21,1:21:76.78:77,0,88	0/0:12,0:12:17.26:0,17,372	0/1:13,0:7:7.63:8,0,17	0/0:21,1:19:2.67:0,3,40	0/1:37,1:33:17.32:34,0,17	0/0:20,0:18:8.46:0,8,54	0/0:15,1:15:6:0,6,59	0/0:37,0:33:1.81:0,2,4	0/0:34,0:34:34.74:0,35,781	0/1:27,1:26:0.75:68,0,1	0/1:6,0:6:11.98:12,0,28	0/1:7,1:7:1.23:34,0,1
chr10	42027209	.	C	CGTGTGT	4095.42	PASS	AB=0.835;AC=47;AF=0.904;AN=52;BaseQRankSum=-0.651;DP=660;FS=1.016;HRun=0;HaplotypeScore=237.2778;InbreedingCoeff=0.2688;MQ=38.55;MQ0=17;MQRankSum=0.455;QD=6.87;ReadPosRankSum=-1.404;VQSLOD=1.7216;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:25:16.39:184,0,16	0/0:15,0:18:23.82:0,24,411	./.	./.	1/1:36,0:35:4.37:26,4,0	1/1:24,0:22:5.95:48,6,0	1/1:19,0:17:8.11:84,8,0	1/1:23,0:20:32.28:297,32,0	1/1:29,0:30:20.34:116,20,0	1/1:27,1:28:27.03:456,27,0	0/1:7,15:26:0:1,0,0	1/1:19,0:18:7.47:59,7,0	1/1:29,0:25:14.13:80,14,0	1/1:30,0:28:28.69:205,29,0	1/1:24,3:28:17.93:195,18,0	1/1:22,0:22:2.94:20,3,0	0/1:23,0:24:72.05:242,0,72	1/1:10,1:12:11.20:184,11,0	1/1:11,0:6:6.02:116,6,0	1/1:19,0:16:11.96:190,12,0	1/1:40,0:35:6.31:85,6,0	1/1:21,0:19:12.01:135,12,0	1/1:15,0:14:8.86:72,9,0	1/1:36,0:32:6.74:68,7,0	1/1:27,3:32:32.26:490,32,0	1/1:29,0:27:33.77:398,34,0	1/1:7,0:7:12.79:179,13,0	1/1:7,0:6:11.07:167,11,0
chr10	42027886	.	ATGTTTTACCT	A	2344.37	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.503;DP=665;FS=2.726;HRun=0;HaplotypeScore=200.2602;InbreedingCoeff=0.9997;MQ=86.48;MQ0=0;MQRankSum=-8.318;QD=60.11;ReadPosRankSum=0.611;VQSLOD=3.2839;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,28:39:72.25:2439,72,0	0/0:12,0:12:36.12:0,36,1823	0/0:20,0:20:54.17:0,54,2269	0/0:25,0:25:63.38:0,63,2642	0/0:27,0:27:81.26:0,81,4222	0/0:25,0:25:75.26:0,75,3885	0/0:26,0:26:72.25:0,72,3749	0/0:24,0:24:72.24:0,72,3532	0/0:24,0:24:72.23:0,72,3486	0/0:22,0:22:63.22:0,63,3179	0/0:24,0:24:72.25:0,72,3808	0/0:22,0:22:66.23:0,66,3452	0/0:33,0:33:99:0,99,5064	0/0:22,0:22:66.23:0,66,3464	0/0:26,0:26:78.25:0,78,4039	0/0:22,0:22:66.23:0,66,3521	0/0:13,0:15:42.14:0,42,2143	0/0:13,0:13:39.13:0,39,1885	0/0:24,0:24:72.25:0,72,3713	0/0:26,0:26:78.27:0,78,4204	0/0:37,0:37:99:0,102,5132	0/0:21,0:21:63.22:0,63,3360	0/0:27,0:27:81.28:0,81,4306	0/0:38,0:38:99:0,114,5997	0/0:18,0:18:54.16:0,54,2770	0/0:24,0:24:72.25:0,72,3738	0/0:14,0:14:42.14:0,42,2267	0/0:15,0:15:45.11:0,45,2002
chr10	42028412	.	CT	C	10570.56	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=1.983;DP=541;FS=6.253;HRun=2;HaplotypeScore=66.9924;InbreedingCoeff=0.9903;MQ=88.18;MQ0=0;MQRankSum=-3.444;QD=33.56;ReadPosRankSum=5.041;VQSLOD=4.8892;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,20:22:48.16:621,48,0	0/0:6,0:6:18.05:0,18,247	0/0:24,0:24:69.10:0,69,896	0/0:23,0:24:72.05:0,72,984	0/0:34,0:34:99:0,102,1408	1/1:1,23:24:69.22:893,69,0	1/1:0,20:20:57.19:740,57,0	1/1:0,27:27:81.20:980,81,0	0/0:11,0:11:30.09:0,30,428	0/0:26,0:26:75.16:0,75,1063	0/0:14,0:14:42.13:0,42,604	1/1:0,21:21:60.20:778,60,0	1/1:0,16:16:42.03:545,42,0	1/1:0,21:21:54.18:701,54,0	0/0:27,0:27:81.25:0,81,1173	0/0:19,0:19:57.18:0,57,818	0/0:21,0:21:63.17:0,63,899	0/0:9,0:9:27.09:0,27,395	1/1:1,19:20:51.15:644,51,0	1/1:2,20:22:54.17:693,54,0	1/1:1,11:12:30.10:389,30,0	1/1:0,15:15:36.12:462,36,0	1/1:0,15:15:32.95:425,33,0	1/1:1,13:14:36.12:467,36,0	0/0:11,0:11:27.09:0,27,405	1/1:1,26:27:36.25:909,36,0	1/1:1,35:36:93.30:1206,93,0	1/1:0,3:3:9.03:117,9,0
chr10	42028676	.	TA	T	13476.34	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=17.348;DP=626;FS=2.111;HRun=1;HaplotypeScore=100.9222;InbreedingCoeff=0.9996;MQ=85.54;MQ0=0;MQRankSum=-2.515;QD=36.13;ReadPosRankSum=2.269;VQSLOD=4.9974;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,27:27:72.23:935,72,0	0/0:13,0:13:39.13:0,39,621	0/0:25,0:25:72.18:0,72,1042	0/0:20,0:20:56.64:0,57,827	0/0:28,0:28:84.27:0,84,1320	1/1:0,29:29:81.26:1052,81,0	1/1:0,22:22:60.20:779,60,0	1/1:2,29:30:87.28:1118,87,0	0/0:13,0:13:39.12:0,39,600	0/0:25,0:25:75.24:0,75,1176	0/0:23,0:23:69.24:0,69,1095	1/1:0,24:24:69.22:896,69,0	1/1:0,30:30:84.27:1090,84,0	1/1:0,17:17:45.15:584,45,0	0/0:31,0:31:93.30:0,93,1461	0/0:24,0:24:72.20:0,72,1102	0/0:18,0:18:54.16:0,54,832	0/0:11,0:11:31.33:0,31,457	1/1:0,16:16:48.13:607,48,0	1/1:1,20:21:57.10:702,57,0	1/1:0,28:28:84.27:1090,84,0	1/1:0,20:20:57.19:740,57,0	1/1:1,18:19:54.17:694,54,0	1/1:0,22:21:60.20:778,60,0	0/0:22,0:22:66.20:0,66,1029	1/1:1,23:24:24.23:816,24,0	1/1:0,32:32:90.29:1168,90,0	1/1:0,11:11:33.11:428,33,0
chr10	42030103	.	C	CAA	5278.70	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=4.194;DP=725;FS=9.554;HRun=10;HaplotypeScore=126.1519;InbreedingCoeff=0.9975;MQ=80.74;MQ0=0;MQRankSum=-3.278;QD=23.05;ReadPosRankSum=-2.999;VQSLOD=2.5227;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,27:33:69.10:944,69,0	0/0:13,0:14:35.76:0,36,335	0/0:26,0:29:50.82:0,51,465	0/0:14,0:13:20.77:0,21,178	0/0:34,0:34:84.15:0,84,854	0/0:26,0:29:71.26:0,71,674	0/0:23,0:23:50.96:0,51,516	1/1:15,13:29:47.57:590,48,0	0/0:36,0:36:78.11:0,78,793	0/0:42,0:44:98.62:0,99,1033	0/0:33,0:35:83.63:0,84,881	0/0:19,0:19:57.10:0,57,571	0/0:23,0:24:56.82:0,57,628	0/0:20,0:21:47.54:0,48,545	0/0:30,0:31:80.55:0,81,857	0/0:35,0:37:80.58:0,81,850	1/1:3,1:24:25.41:190,25,0	0/0:12,0:12:30.03:0,30,295	1/1:7,9:18:33.10:448,33,0	1/1:8,19:32:66.85:791,67,0	1/1:5,8:14:17.55:232,18,0	0/0:27,0:28:61.31:0,61,686	0/0:18,0:21:35.24:0,35,451	0/0:21,0:21:60.11:0,60,608	0/0:21,0:22:56.83:0,57,561	1/1:8,17:27:53.62:716,54,0	1/1:9,27:38:60.92:857,61,0	1/1:3,11:14:36.08:511,36,0
chr10	42031171	.	AGG	A	4326.61	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=10.414;DP=699;FS=4.136;HRun=4;HaplotypeScore=84.2022;InbreedingCoeff=0.9998;MQ=87.14;MQ0=0;MQRankSum=-2.892;QD=41.21;ReadPosRankSum=2.169;VQSLOD=4.1570;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,144,2648	0/0:10,0:10:30.10:0,30,561	0/0:27,0:27:78.27:0,78,1442	0/0:20,0:21:38.25:0,38,854	0/0:44,0:44:99:0,132,2456	0/0:23,0:23:69.24:0,69,1285	0/0:24,0:24:72.25:0,72,1349	0/0:28,0:28:81.24:0,81,1399	0/0:20,0:20:60.18:0,60,1059	1/1:0,26:26:78.26:1149,78,0	1/1:1,24:25:72.24:1058,72,0	0/0:29,0:29:87.30:0,87,1614	0/0:29,0:29:84.29:0,84,1573	0/0:28,0:28:78.27:0,78,1461	1/1:2,23:25:60.20:883,60,0	0/0:34,0:34:96.33:0,96,1791	0/0:23,0:23:69.24:0,69,1292	1/1:0,13:13:36.12:530,36,0	0/0:23,0:23:66.20:0,66,1141	0/0:27,0:27:78.25:0,78,1426	0/0:19,0:19:54.17:0,54,981	0/0:32,0:32:90.25:0,90,1596	0/0:16,0:16:48.16:0,48,890	0/0:16,0:16:48.12:0,48,863	1/1:0,16:16:48.16:707,48,0	0/0:32,0:32:90.29:0,90,1625	0/0:30,0:30:81.26:0,81,1485	0/0:11,0:11:33.11:0,33,618
chr10	42031710	.	TACACACACACAC	T	1391.35	PASS	AC=14;AF=0.269;AN=52;BaseQRankSum=1.780;DP=527;FS=5.749;HRun=0;HaplotypeScore=199.4427;InbreedingCoeff=0.8378;MQ=53.14;MQ0=15;MQRankSum=-1.686;QD=12.42;ReadPosRankSum=-0.195;VQSLOD=1.9827;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:26:54.19:0,54,2510	0/0:7,0:7:12.93:0,13,636	0/0:33,0:15:17.99:0,18,584	0/0:20,0:9:6.02:0,6,288	0/0:25,0:25:27.09:0,27,1148	1/1:9,4:13:15.04:373,15,0	1/1:8,14:22:6.02:205,6,0	0/0:30,0:28:53.85:0,54,2237	0/0:22,0:22:30.57:0,31,1275	0/0:15,0:15:21.07:0,21,988	0/0:18,0:18:36.59:0,37,1750	1/1:8,8:18:14.81:441,15,0	1/1:7,4:11:14.77:295,15,0	./.	0/0:11,0:11:15.05:0,15,683	0/0:23,0:22:13.56:0,14,1705	0/0:12,0:12:25.61:0,26,1000	0/0:13,0:13:27.09:0,27,1268	0/0:15,0:13:30.10:0,30,1206	0/0:39,0:35:19.76:0,20,668	0/0:11,0:14:3.45:0,3,21	1/1:5,5:12:6.02:95,6,0	1/1:12,8:20:9.50:146,10,0	1/1:9,4:13:1.72:4,2,0	0/0:17,0:17:18.06:0,18,953	0/0:22,0:22:45.15:0,45,1503	0/0:26,0:24:33.11:0,33,1214	./.
chr10	42031764	.	GAGAGAGAGAAAGAGAGAGAGAA	G	2837.79	PASS	AB=0.974;AC=27;AF=0.500;AN=54;BaseQRankSum=-2.134;DP=515;FS=2.046;HRun=0;HaplotypeScore=262.2509;InbreedingCoeff=-0.1103;MQ=43.71;MQ0=14;MQRankSum=-1.491;QD=7.35;ReadPosRankSum=-3.990;VQSLOD=1.9792;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:28:54.22:54,0,1641	0/0:15,0:15:33.06:0,33,2232	0/0:6,0:3:9.03:0,9,275	0/0:7,0:3:7.58:0,8,145	1/1:36,0:36:0.47:1,0,0	0/0:17,0:17:9.42:0,9,1300	0/1:19,0:19:95.30:95,0,188	1/1:19,0:17:3.14:121,3,0	0/1:16,0:16:4.89:83,0,5	0/1:12,0:11:35.43:35,0,252	0/1:14,0:14:57.87:58,0,150	0/1:22,0:20:59.07:59,0,523	0/0:23,0:23:42.14:0,42,1778	0/1:24,0:24:31.97:32,0,1367	0/1:14,0:14:13.65:14,0,131	0/1:20,0:19:95.38:95,0,114	0/0:27,0:27:37.46:0,37,3162	0/1:12,0:12:23.44:23,0,372	0/1:12,0:11:4.81:292,0,5	1/1:25,3:23:3.90:52,4,0	1/1:9,0:9:3.01:50,3,0	0/1:24,0:23:99:125,0,346	1/1:25,0:24:8.41:47,8,0	0/0:13,0:13:1.56:0,2,237	./.	1/1:7,14:21:51.38:1233,51,0	0/1:13,13:24:24.31:363,0,24	1/1:3,0:2:3.01:164,3,0
chr10	42031770	.	GAGAAAGAGAGAGAGAA	G	4576.41	PASS	AB=0.980;AC=35;AF=0.625;AN=56;BaseQRankSum=-2.219;DP=498;FS=14.045;HRun=0;HaplotypeScore=215.2058;InbreedingCoeff=0.0795;MQ=47.37;MQ0=13;MQRankSum=-1.877;QD=10.79;ReadPosRankSum=-5.045;VQSLOD=1.0739;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:28:99:231,0,771	0/0:16,0:16:35.35:0,35,1711	0/0:10,0:5:14.08:0,14,228	0/0:10,0:4:10.37:0,10,101	1/1:3,33:36:0.47:1,0,0	0/1:20,0:20:99:141,0,755	0/1:15,0:16:85.42:137,0,85	1/1:16,0:14:5.36:178,5,0	1/1:16,0:16:8.39:84,8,0	1/1:12,0:12:25.81:316,26,0	1/1:12,0:12:7.27:83,7,0	0/1:20,0:19:99:143,0,332	0/1:22,0:23:96.43:96,0,952	0/1:21,0:21:99:144,0,861	0/1:13,0:13:13.65:14,0,52	1/1:21,1:21:32.28:348,32,0	0/0:25,0:25:16.07:0,16,2057	0/1:11,0:11:75.35:237,0,75	1/1:8,0:8:19.22:392,19,0	1/1:26,0:21:6.91:102,7,0	1/1:9,0:9:3.01:50,3,0	0/1:23,0:23:99:262,0,161	1/1:23,0:22:9.02:47,9,0	0/0:13,0:13:0.98:0,1,160	0/1:19,0:18:0:0,0,0	1/1:19,1:20:56.91:1142,57,0	0/1:23,0:21:4.40:311,0,4	1/1:3,0:2:3.01:115,3,0
chr10	42031772	.	GAA	G	3511.30	PASS	AB=0.979;AC=44;AF=0.846;AN=52;BaseQRankSum=4.482;DP=496;FS=5.001;HRun=3;HaplotypeScore=149.4744;InbreedingCoeff=0.5827;MQ=49.02;MQ0=13;MQRankSum=-0.901;QD=8.69;ReadPosRankSum=-0.405;VQSLOD=0.0336;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:28,1:27:55.16:482,55,0	0/0:16,0:16:29.98:0,30,364	0/0:13,0:6:14.17:0,14,109	0/0:11,0:5:6.92:0,7,66	./.	1/1:19,1:20:31.08:252,31,0	1/1:14,2:16:14.64:118,15,0	1/1:16,0:14:7.15:133,7,0	1/1:15,0:15:8.37:60,8,0	1/1:10,3:13:31.10:278,31,0	1/1:11,2:14:11.90:131,12,0	1/1:18,2:18:16.80:106,17,0	1/1:21,2:23:34.08:364,34,0	1/1:22,0:22:19.73:152,20,0	1/1:7,7:14:9.44:72,9,0	1/1:22,0:21:32.45:256,32,0	0/1:24,0:24:26.68:27,0,144	1/1:10,1:11:29.64:216,30,0	1/1:2,0:8:15.75:106,16,0	1/1:25,0:21:6.71:52,7,0	1/1:9,0:9:3:25,3,0	1/1:18,6:23:29.04:235,29,0	0/1:22,1:22:0.01:0,0,0	1/1:11,1:12:2.37:8,2,0	./.	1/1:18,0:20:47.38:329,47,0	1/1:17,1:18:14.09:94,14,0	1/1:3,0:2:2.90:16,3,0
chr10	42031778	.	GAGAGAGAA	G	2968.62	PASS	AB=0.993;AC=36;AF=0.667;AN=54;BaseQRankSum=-0.061;DP=462;FS=1.395;HRun=0;HaplotypeScore=175.5326;InbreedingCoeff=0.2522;MQ=54.05;MQ0=10;MQRankSum=-1.707;QD=8.51;ReadPosRankSum=-4.594;VQSLOD=1.1280;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:25:99:181,0,144	0/0:14,0:14:34.06:0,34,1188	0/0:18,0:8:23.94:0,24,475	0/0:13,0:7:15.85:0,16,258	./.	0/1:20,0:20:99:134,0,268	0/1:16,0:16:13.01:102,0,13	1/1:9,0:7:11.94:95,12,0	1/1:7,0:7:5.96:48,6,0	1/1:14,1:15:28.17:377,28,0	1/1:20,1:21:8.68:147,9,0	0/1:19,0:18:99:111,0,172	0/1:23,0:23:99:135,0,372	0/1:23,0:23:99:173,0,392	1/1:12,3:15:5.65:62,6,0	1/1:15,0:14:11.53:92,12,0	0/0:22,0:22:55.06:0,55,1242	1/1:12,0:12:15.34:196,15,0	1/1:6,0:6:11.99:166,12,0	1/1:14,0:13:6.88:53,7,0	1/1:4,0:4:5.99:49,6,0	0/1:21,0:21:40.25:184,0,40	1/1:24,0:23:11.60:65,12,0	0/0:12,0:12:3.01:0,3,89	0/1:17,1:17:0:0,0,0	1/1:19,0:19:39.43:522,39,0	1/1:17,1:17:10.58:194,11,0	1/1:3,0:2:3.01:56,3,0
chr10	42031780	.	GAGAGAA	G	2503.66	PASS	AB=1.000;AC=37;AF=0.685;AN=54;BaseQRankSum=1.297;DP=458;FS=3.358;HRun=0;HaplotypeScore=165.4263;InbreedingCoeff=0.3225;MQ=55.87;MQ0=8;MQRankSum=-1.401;QD=7.30;ReadPosRankSum=-3.660;VQSLOD=1.7367;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:24:1.02:138,0,1	0/0:14,0:14:34.06:0,34,1019	0/0:19,0:9:27.03:0,27,529	0/0:14,0:8:14.34:0,14,284	./.	0/1:21,0:21:99:117,0,152	1/1:16,0:16:5.07:60,5,0	1/1:9,0:7:11.98:116,12,0	1/1:5,0:5:5.99:49,6,0	1/1:14,2:16:35.51:383,36,0	1/1:21,0:21:8.43:136,8,0	0/1:19,0:18:55.57:56,0,133	0/1:23,0:23:70.08:70,0,193	0/1:23,0:23:99:108,0,267	1/1:13,3:16:5.98:91,6,0	1/1:12,0:11:11.56:92,12,0	0/0:21,0:21:54.48:0,54,962	1/1:12,0:12:10.59:177,11,0	1/1:6,0:6:11.88:132,12,0	1/1:12,0:12:6.88:52,7,0	1/1:4,0:4:5.99:49,6,0	0/1:22,0:22:22.05:122,0,22	1/1:24,0:23:11.98:65,12,0	0/0:13,0:13:3.01:0,3,66	0/1:18,0:17:0:0,0,0	1/1:18,0:18:41.96:467,42,0	1/1:18,0:17:10.57:152,11,0	1/1:3,0:2:3.01:42,3,0
chr10	42031784	.	GAA	G	3577.84	PASS	AB=1.000;AC=40;AF=0.769;AN=52;BaseQRankSum=2.644;DP=464;FS=2.084;HRun=3;HaplotypeScore=140.1387;InbreedingCoeff=0.6416;MQ=59.94;MQ0=7;MQRankSum=-1.361;QD=11.11;ReadPosRankSum=-1.434;VQSLOD=-0.0418;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:24:54.56:457,55,0	0/0:14,0:14:32.78:0,33,618	0/0:23,0:13:32.15:0,32,468	0/0:18,0:12:20.81:0,21,297	./.	1/1:22,0:22:6.79:213,7,0	1/1:14,0:14:16.98:131,17,0	1/1:14,0:12:32.95:288,33,0	1/1:7,0:7:11.98:99,12,0	1/1:3,14:17:42.24:365,42,0	1/1:21,0:21:25.23:229,25,0	0/1:16,0:15:44.32:70,0,44	1/1:22,0:22:32.02:218,32,0	0/1:22,0:22:49.45:140,0,49	1/1:17,0:17:20.98:176,21,0	1/1:9,0:8:11.93:93,12,0	0/0:22,0:22:57.09:0,57,851	1/1:10,0:10:26.84:208,27,0	1/1:6,0:6:11.77:77,12,0	1/1:11,0:11:12.88:103,13,0	1/1:4,0:4:5.99:50,6,0	1/1:23,0:23:27.22:183,27,0	1/1:25,0:24:11.13:64,11,0	0/0:14,0:14:2.89:0,3,17	./.	1/1:18,0:18:41.63:308,42,0	1/1:17,0:17:11.87:87,12,0	1/1:3,0:2:2.92:17,3,0
chr10	42031786	.	A	AAG	4014.18	PASS	AB=1.000;AC=32;AF=0.593;AN=54;BaseQRankSum=-0.716;DP=467;FS=2.509;HRun=0;HaplotypeScore=141.5053;InbreedingCoeff=0.5270;MQ=60.74;MQ0=5;MQRankSum=0.938;QD=12.99;ReadPosRankSum=-1.415;VQSLOD=3.4887;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:22:44.78:561,45,0	0/0:14,0:14:32.55:0,33,412	0/0:25,0:15:39.81:0,40,425	0/0:18,0:12:19.64:0,20,235	./.	1/1:22,0:22:45.14:643,45,0	1/1:14,0:14:20.90:323,21,0	1/1:15,0:13:8.63:83,9,0	1/1:7,0:7:2.99:24,3,0	0/1:18,0:18:30.44:33,0,30	0/1:21,0:21:13.49:40,0,13	1/1:17,0:16:24.08:358,24,0	1/1:22,0:22:36.58:495,37,0	1/1:20,2:22:45.02:707,45,0	0/1:16,0:16:6.96:20,0,7	1/1:9,0:8:2.98:22,3,0	0/0:24,0:24:53.84:0,54,660	0/1:10,0:10:0.64:1,0,2	0/0:6,0:6:6.65:0,7,26	0/1:11,0:11:0.04:0,0,0	1/1:5,0:5:2.99:24,3,0	1/1:22,0:22:36.09:507,36,0	1/1:10,15:25:11.66:125,12,0	1/1:3,11:14:3.01:50,3,0	0/1:17,0:17:0:0,0,0	0/0:18,0:18:14.79:0,15,70	0/0:17,0:17:4.66:0,5,22	0/0:2,0:2:2.04:0,2,6
chr10	42033370	.	GCA	G	2656.74	PASS	AB=0.863;AC=20;AF=0.385;AN=52;BaseQRankSum=-0.396;DP=605;FS=1.732;HRun=0;HaplotypeScore=186.5488;InbreedingCoeff=0.6734;MQ=58.86;MQ0=13;MQRankSum=-1.954;QD=11.16;ReadPosRankSum=1.334;VQSLOD=3.3556;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:14,27:41:12.67:536,13,0	0/1:9,1:10:11:11,0,300	0/0:49,0:27:21.07:0,21,315	0/0:40,0:33:38.53:0,39,470	./.	1/1:9,11:20:23.95:256,24,0	1/1:9,6:16:14.91:154,15,0	0/0:33,0:32:45.40:0,45,498	0/0:32,0:30:32.90:0,33,228	0/0:23,0:23:32.62:0,33,298	0/0:18,0:19:11.75:0,12,71	1/1:9,7:16:29.90:320,30,0	1/1:5,15:20:27.06:305,27,0	1/1:8,11:19:27.55:323,28,0	0/0:21,0:23:16.87:0,17,105	0/0:16,0:15:14.76:0,15,97	0/1:11,1:12:41.81:42,0,323	0/0:9,0:9:5.56:0,6,68	0/0:18,0:16:20.17:0,20,166	0/0:19,0:17:14.82:0,15,125	0/1:14,0:10:0.23:0,0,0	0/1:7,11:18:20.77:236,0,21	1/1:6,11:17:33.09:371,33,0	1/1:17,15:31:26.87:296,27,0	0/0:30,0:31:17.40:0,17,116	0/0:26,0:24:44.43:0,44,409	0/0:11,1:11:3.73:0,4,113	./.
chr10	42033388	.	ACACTTTCTCTCTCTCTCTCTCT	A	2376.94	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=4.550;DP=519;FS=1.615;HRun=0;HaplotypeScore=285.5953;InbreedingCoeff=0.1685;MQ=36.68;MQ0=46;MQRankSum=-1.962;QD=7.59;ReadPosRankSum=-0.774;VQSLOD=2.3355;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:38,0:33:4.06:187,4,0	0/0:10,0:10:7.86:0,8,1006	0/0:22,0:7:21.07:0,21,368	0/0:17,0:14:38.58:0,39,379	0/1:11,0:9:0:0,0,0	1/1:14,4:16:16.44:115,16,0	1/1:11,0:7:13.83:64,14,0	0/0:29,0:25:47.40:0,47,569	0/1:29,0:25:74.47:423,0,74	0/1:19,0:18:99:294,0,244	0/0:18,0:17:5.63:0,6,16	1/1:13,0:13:23.95:144,24,0	1/1:20,0:18:26.15:395,26,0	1/1:18,0:18:20.14:250,20,0	0/0:18,0:18:9.80:0,10,94	0/0:14,0:11:6.14:0,6,29	0/0:18,0:15:11.37:0,11,420	0/1:10,0:8:23.98:24,0,55	0/1:20,0:17:99:173,0,288	0/0:18,0:16:9.14:0,9,40	0/0:13,0:7:3.74:0,4,12	0/1:15,0:12:24.05:91,0,24	0/1:19,0:18:99:119,0,126	0/1:30,0:28:77.65:78,0,146	0/0:29,0:29:10.12:0,10,40	0/1:24,0:21:79.12:79,0,698	0/1:10,0:8:99:110,0,290	0/1:6,0:3:1.62:8,0,2
chr10	42033390	.	ACTTTCTCTCTCTCTCTCT	A	1869.79	PASS	AB=0.977;AC=22;AF=0.393;AN=56;BaseQRankSum=6.771;DP=523;FS=7.891;HRun=0;HaplotypeScore=256.4254;InbreedingCoeff=0.1463;MQ=34.50;MQ0=46;MQRankSum=-4.409;QD=6.40;ReadPosRankSum=4.059;VQSLOD=1.3893;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:33:38.81:0,39,131	0/0:10,0:10:16.21:0,16,680	0/0:18,0:6:17.99:0,18,161	0/0:14,0:11:5.54:0,6,91	1/1:6,5:9:0.47:1,0,0	0/0:18,0:16:4.01:0,4,40	0/0:11,0:7:10.32:0,10,39	0/0:28,0:24:37.97:0,38,264	1/1:22,3:24:27.22:581,27,0	0/1:21,0:21:34.69:298,0,35	1/1:14,0:17:3.34:53,3,0	0/1:14,0:13:1.79:2,0,80	0/1:20,0:18:35.91:220,0,36	0/1:20,0:19:89.48:108,0,89	0/1:19,0:21:18.62:49,0,19	1/1:13,1:11:13.53:87,14,0	0/0:16,0:14:24.83:0,25,180	0/1:10,0:8:15.94:55,0,16	0/1:16,0:14:99:220,0,154	1/1:20,0:19:10.48:68,10,0	0/0:12,0:6:3.48:0,3,12	0/0:16,0:12:13.69:0,14,53	0/0:19,0:18:21.27:0,21,204	0/0:29,0:28:23.92:0,24,245	1/1:29,0:34:2.06:76,2,0	0/1:24,0:21:98.69:99,0,335	0/1:11,0:9:99:113,0,172	0/1:6,0:3:1.83:8,0,2
chr10	42033393	.	TTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	T	1654.59	PASS	AB=0.946;AC=20;AF=0.385;AN=52;BaseQRankSum=3.371;DP=448;FS=15.724;HRun=0;HaplotypeScore=293.4659;InbreedingCoeff=-0.0627;MQ=34.68;MQ0=48;MQRankSum=-1.258;QD=6.32;ReadPosRankSum=-0.646;VQSLOD=0.4434;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:31,5:31:5.89:79,6,0	0/0:10,0:10:24.06:0,24,1523	./.	0/0:13,0:10:3.01:0,3,76	1/1:8,0:6:0.47:1,0,0	0/0:14,2:16:2.92:0,3,51	1/1:11,0:7:3.01:49,3,0	0/0:22,0:18:17.95:0,18,277	0/1:19,0:15:48.29:523,0,48	0/1:15,0:14:99:222,0,288	0/0:16,0:14:5.72:0,6,159	1/1:9,1:11:3:26,3,0	1/1:15,3:17:4.44:314,4,0	0/1:15,1:19:57.86:316,0,58	0/1:17,0:17:9.25:9,0,134	0/0:10,0:7:7.83:0,8,73	0/0:14,0:12:15.05:0,15,632	0/1:6,0:5:5.49:5,0,90	0/1:16,0:12:16.43:16,0,308	0/0:19,0:17:11.58:0,12,48	0/0:11,0:5:2.92:0,3,8	./.	0/0:12,3:18:4.86:0,5,287	0/1:19,4:23:17.11:17,0,257	0/1:29,0:29:9.10:9,0,75	0/1:16,0:13:99:103,0,1136	0/1:11,0:9:99:111,0,476	0/0:5,0:2:3.48:0,3,40
chr10	42033418	.	TCTCTCTCTCTCTCTCTCTCTCTCACACACA	T	3493.78	PASS	AB=0.923;AC=17;AF=0.327;AN=52;BaseQRankSum=3.085;DP=373;FS=10.839;HRun=0;HaplotypeScore=253.4527;InbreedingCoeff=-0.0964;MQ=33.42;MQ0=49;MQRankSum=-1.717;QD=14.87;ReadPosRankSum=2.339;VQSLOD=0.9912;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:6:1.34:0,1,5	0/0:9,0:9:21.53:0,22,1107	./.	./.	0/0:13,0:8:8.75:0,9,210	0/0:12,0:10:8.34:0,8,313	0/0:8,0:3:3.01:0,3,111	0/1:10,0:7:8.44:12,0,8	0/1:23,0:19:99:301,0,212	0/1:9,11:19:34.64:1020,0,35	0/1:19,0:17:82.15:82,0,186	0/0:7,0:6:2.95:0,3,20	0/1:12,0:9:99:174,0,345	0/1:9,0:8:99:147,0,226	0/1:7,15:22:48.27:149,0,48	0/0:11,0:9:13.23:0,13,233	0/0:17,0:14:33.54:0,34,994	1/1:9,0:7:8.99:189,9,0	0/1:13,0:10:39.80:359,0,40	0/1:27,0:25:0.04:60,0,0	0/0:9,0:3:1.25:0,1,4	0/0:10,0:6:3.01:0,3,111	0/0:12,0:11:5.26:0,5,282	0/0:18,0:15:3.94:0,4,214	1/1:16,15:31:5.20:162,5,0	0/1:19,0:18:99:587,0,383	0/1:15,0:14:99:183,0,210	1/1:4,0:2:2.97:69,3,0
chr10	42033420	.	TCTCTCTCTCTCTCTCTCTCTCACACACACACACACA	T	2728.44	PASS	AB=0.957;AC=13;AF=0.250;AN=52;BaseQRankSum=-0.880;DP=376;FS=0.000;HRun=0;HaplotypeScore=279.9177;InbreedingCoeff=-0.1163;MQ=33.59;MQ0=49;MQRankSum=-4.051;QD=17.83;ReadPosRankSum=1.144;VQSLOD=1.9498;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:8:4.50:0,5,132	0/0:9,0:9:17.86:0,18,1189	./.	./.	0/0:17,0:11:7.97:0,8,504	0/0:14,0:12:11.29:0,11,812	0/0:9,0:3:3.01:0,3,197	0/1:9,0:6:12.03:70,0,12	0/1:21,0:17:13.12:13,0,525	0/1:19,0:18:99:164,0,382	0/0:17,0:15:6.20:0,6,304	0/0:10,0:8:3.01:0,3,79	0/1:12,0:9:99:107,0,768	0/1:11,0:9:58.83:59,0,424	0/0:21,0:21:11.37:0,11,110	0/0:14,0:12:19.31:0,19,1055	0/0:17,0:14:14.64:0,15,1415	0/1:7,0:5:46.83:47,0,77	0/1:12,0:9:22.48:654,0,22	1/1:14,12:24:6.32:161,6,0	0/0:8,0:3:0.51:0,1,2	0/0:10,0:6:3.01:0,3,207	0/0:14,0:13:4.74:0,5,341	0/0:20,0:17:3.46:0,3,196	0/0:27,0:28:5.75:0,6,63	0/1:18,0:16:99:1190,0,278	0/1:5,9:13:99:271,0,170	1/1:4,0:2:2.90:132,3,0
chr10	42033440	.	TCACACACACACACACA	T	2253.62	PASS	AB=0.907;AC=14;AF=0.259;AN=54;BaseQRankSum=2.619;DP=460;FS=4.514;HRun=0;HaplotypeScore=214.6281;InbreedingCoeff=0.4155;MQ=36.50;MQ0=44;MQRankSum=-3.471;QD=14.73;ReadPosRankSum=1.485;VQSLOD=2.3507;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:22:30.10:0,30,1046	0/0:10,0:10:17.50:0,18,1071	0/0:2,0:1:3.01:0,3,61	0/0:3,0:1:3.01:0,3,218	0/0:25,0:19:29.71:0,30,1823	0/0:18,0:15:14.39:0,14,860	0/0:20,0:15:26.58:0,27,1437	0/1:15,4:12:99:207,0,427	0/0:18,0:15:17.79:0,18,642	0/1:18,0:18:7.30:7,0,396	0/0:9,0:13:1.20:0,1,159	0/0:18,0:15:21.07:0,21,1244	0/0:16,0:13:29.83:0,30,1352	0/0:16,0:14:12.04:0,12,501	0/1:18,0:19:0.01:0,0,0	0/0:16,0:14:36.12:0,36,2144	0/0:16,0:14:21.07:0,21,1154	0/0:7,0:9:18.59:0,19,393	0/1:14,3:15:99:382,0,331	1/1:21,0:20:9.46:193,9,0	./.	0/0:14,0:10:6.02:0,6,336	0/0:20,0:20:18.06:0,18,1129	0/0:29,0:26:3.83:0,4,195	1/1:26,0:26:0.71:1,1,0	1/1:8,10:17:26.19:1352,26,0	1/1:11,0:11:3.01:123,3,0	1/1:2,1:1:3.01:133,3,0
chr10	42034176	.	AT	A	2144.99	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=12.459;DP=613;FS=0.450;HRun=6;HaplotypeScore=80.7521;InbreedingCoeff=0.9964;MQ=75.44;MQ0=0;MQRankSum=-0.356;QD=24.37;ReadPosRankSum=2.242;VQSLOD=3.6566;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:75.24:0,75,987	0/0:12,0:12:36.12:0,36,474	0/0:17,0:17:45.13:0,45,544	0/0:8,0:8:18.18:0,18,233	1/1:4,36:40:99:1015,99,0	0/0:27,0:27:78.25:0,78,1026	0/0:22,0:22:60.19:0,60,785	0/0:28,0:28:81.26:0,81,1066	1/1:2,20:22:54.12:559,54,0	0/0:28,0:28:84.26:0,84,1091	0/0:26,0:26:75.24:0,75,987	0/0:17,0:17:51.15:0,51,645	0/0:22,0:22:57.18:0,57,737	0/0:16,0:16:45.15:0,45,591	0/0:27,0:27:78.25:0,78,1025	1/1:2,24:26:69.15:714,69,0	0/0:9,0:9:24.08:0,24,315	0/0:16,0:16:48.16:0,48,631	0/0:21,0:21:60.18:0,60,776	0/0:29,0:29:87.26:0,87,1115	0/0:19,0:18:51.17:0,51,670	0/0:18,0:18:45.15:0,45,592	0/0:20,0:20:57.19:0,57,750	0/0:21,0:21:57.17:0,57,736	0/0:24,0:23:69.22:0,69,908	0/0:29,0:29:84.27:0,84,1105	0/0:31,0:31:87.27:0,87,1126	0/0:13,0:13:39.11:0,39,499
chr10	42034422	.	TCA	T	2915.97	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=6.641;DP=559;FS=0.958;HRun=0;HaplotypeScore=74.9331;InbreedingCoeff=0.9674;MQ=70.45;MQ0=0;MQRankSum=-1.382;QD=31.35;ReadPosRankSum=2.445;VQSLOD=5.4810;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:42.14:0,42,689	0/0:15,1:16:6.55:0,7,670	0/0:19,0:19:54.11:0,54,829	0/0:15,0:15:41.14:0,41,616	0/0:36,0:36:99:0,108,1812	0/0:16,0:16:48.15:0,48,783	0/0:21,0:21:54.18:0,54,907	0/0:28,0:28:69.24:0,69,1163	0/0:20,1:21:15.58:0,16,818	1/1:1,21:22:63.20:811,63,0	1/1:2,26:28:66.21:850,66,0	0/0:15,0:15:36.12:0,36,607	0/0:25,0:25:75.26:0,75,1254	0/0:15,0:15:42.14:0,42,709	1/1:0,21:21:57.19:734,57,0	0/0:19,0:19:54.17:0,54,884	0/0:13,0:13:33.11:0,33,556	1/1:0,5:5:12.04:154,12,0	0/0:23,0:23:45.15:0,45,760	0/0:30,0:30:84.29:0,84,1401	0/0:11,0:11:30.10:0,30,502	0/0:9,0:9:27.09:0,27,456	0/0:18,0:18:48.16:0,48,810	0/0:21,0:21:63.21:0,63,1045	1/1:3,14:17:42.14:541,42,0	0/0:32,0:32:75.26:0,75,1264	0/0:32,0:32:81.24:0,81,1273	0/0:15,0:15:45.15:0,45,759
chr10	42034840	.	TG	T	9777.20	PASS	AB=1.000;AC=46;AF=0.821;AN=56;BaseQRankSum=4.939;DP=655;FS=2.757;HRun=6;HaplotypeScore=90.4953;InbreedingCoeff=0.4867;MQ=87.07;MQ0=0;MQRankSum=-6.675;QD=16.38;ReadPosRankSum=5.831;VQSLOD=4.4937;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,33:33:87.22:935,87,0	0/0:7,0:7:21.06:0,21,263	0/0:28,0:28:56.34:0,56,732	0/0:23,0:22:46.13:0,46,550	1/1:35,0:35:70.72:235,71,0	1/1:0,28:28:72.18:774,72,0	1/1:2,13:15:33.08:355,33,0	0/1:27,0:27:41.76:42,0,43	0/1:21,0:21:22.40:77,0,22	1/1:3,28:31:84.20:893,84,0	1/1:1,21:22:60.09:630,60,0	1/1:1,12:13:30.08:322,30,0	1/1:2,21:23:51.12:548,51,0	1/1:2,24:26:66.17:709,66,0	1/1:0,20:20:54.14:580,54,0	1/1:25,0:25:22.42:136,22,0	0/1:15,0:15:6.57:7,0,116	1/1:1,8:9:21.05:226,21,0	0/1:24,0:24:55.73:56,0,56	1/1:36,0:36:50.40:236,50,0	1/1:16,0:16:1.19:48,1,0	1/1:2,23:25:66.08:684,66,0	1/1:4,27:31:57.14:613,57,0	1/1:1,15:16:42.11:451,42,0	1/1:2,30:32:84.21:903,84,0	1/1:30,0:30:23.04:106,23,0	1/1:29,0:29:5.77:121,6,0	1/1:15,0:15:29.37:92,29,0
chr10	42034846	.	GA	G	8361.39	PASS	AB=1.000;AC=41;AF=0.732;AN=56;BaseQRankSum=6.519;DP=658;FS=0.435;HRun=6;HaplotypeScore=95.8881;InbreedingCoeff=0.3567;MQ=83.99;MQ0=0;MQRankSum=-6.990;QD=14.32;ReadPosRankSum=8.708;VQSLOD=3.2836;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:39,0:39:29.08:115,0,29	0/0:9,0:9:24.05:0,24,284	0/0:25,0:25:63.08:0,63,722	0/0:21,0:20:40.77:0,41,546	1/1:0,33:33:99:1047,99,0	1/1:29,0:29:23.52:117,24,0	1/1:13,0:13:17.85:50,18,0	1/1:3,24:27:72.11:734,72,0	1/1:3,19:22:54.13:579,54,0	0/1:31,0:31:38.91:72,0,39	1/1:22,0:22:15.77:94,16,0	0/1:14,0:14:25.69:33,0,26	0/1:24,0:24:35.01:57,0,35	1/1:25,0:25:41.01:123,41,0	0/1:22,0:22:14:51,0,14	1/1:0,26:26:63.15:669,63,0	0/0:19,0:19:45.34:0,45,544	1/1:8,0:8:14.54:49,15,0	1/1:2,21:23:63.11:656,63,0	1/1:2,34:36:99:1048,99,0	1/1:1,14:15:36.09:386,36,0	0/1:25,0:25:7.35:76,0,7	0/1:30,0:30:28.73:74,0,29	1/1:16,0:16:5.89:69,6,0	1/1:31,0:31:32.95:138,33,0	1/1:1,29:30:87.22:934,87,0	1/1:2,27:29:69.17:740,69,0	1/1:0,14:14:42.11:451,42,0
chr10	42037344	.	T	TA	5022.64	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-2.376;DP=373;FS=0.000;HRun=8;HaplotypeScore=44.4975;InbreedingCoeff=0.9336;MQ=65.49;MQ0=0;MQRankSum=0.153;QD=23.47;ReadPosRankSum=0.690;VQSLOD=5.0446;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:61.82:0,62,555	0/0:7,0:7:17.98:0,18,158	0/0:11,0:11:5.08:0,5,103	0/0:4,0:4:3:0,3,28	0/0:18,0:18:45.01:0,45,412	0/0:10,0:10:27.01:0,27,247	0/0:10,0:10:30.02:0,30,275	1/1:0,24:24:72.20:820,72,0	0/0:8,0:8:24:0,24,215	1/1:3,1:19:42.72:225,43,0	1/1:1,0:15:34.09:173,34,0	0/0:11,0:11:33.02:0,33,302	0/0:9,0:9:23.99:0,24,215	0/0:9,0:9:27.01:0,27,247	1/1:1,0:12:28.44:145,28,0	0/0:7,0:7:21.01:0,21,192	1/1:2,29:30:84.25:969,84,0	1/1:4,0:26:56.82:289,57,0	1/1:0,14:14:42.12:485,42,0	1/1:4,18:22:57.17:655,57,0	1/1:1,3:4:9.03:104,9,0	0/0:2,0:2:6:0,6,55	0/0:12,0:12:36.02:0,36,330	0/0:11,0:11:30:0,30,269	1/1:0,0:15:36.93:188,37,0	1/1:1,10:11:30.09:346,30,0	1/1:2,10:12:27.08:312,27,0	1/1:0,9:9:27.08:312,27,0
chr10	42037658	.	CA	C	2051.11	PASS	AB=0.900;AC=17;AF=0.304;AN=56;BaseQRankSum=10.233;DP=423;FS=16.322;HRun=9;HaplotypeScore=51.5188;InbreedingCoeff=0.9207;MQ=76.35;MQ0=0;MQRankSum=1.672;QD=19.72;ReadPosRankSum=1.830;VQSLOD=2.5112;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:57.17:0,57,656	0/0:6,0:6:18.05:0,18,208	0/1:8,1:9:7.21:7,0,136	0/0:9,0:9:18.03:0,18,182	0/0:3,0:18:43.09:0,43,247	1/1:0,16:16:41.92:384,42,0	1/1:0,11:11:30.02:275,30,0	0/0:35,1:36:65.78:0,66,986	0/0:2,0:13:28.41:0,28,144	0/0:17,0:17:39.09:0,39,432	0/0:16,0:16:45.13:0,45,519	1/1:1,8:9:24.01:219,24,0	1/1:1,12:13:36.02:330,36,0	1/1:0,6:6:15.01:137,15,0	0/0:11,0:11:33.02:0,33,356	0/0:1,0:8:17.04:0,17,87	0/0:21,0:21:51.15:0,51,588	0/0:13,0:13:33.10:0,33,381	0/0:22,0:22:60.18:0,60,692	0/0:18,0:18:51.15:0,51,589	0/0:16,0:16:48.10:0,48,524	1/1:0,9:9:24.01:220,24,0	1/1:1,15:16:42.02:384,42,0	1/1:2,13:15:33.01:302,33,0	0/0:16,0:16:48.14:0,48,554	0/0:19,0:19:51.14:0,51,580	0/0:18,0:18:45.12:0,45,511	0/0:21,0:21:54.16:0,54,623
chr10	42038430	.	A	AG	3413.46	PASS	AB=0.896;AC=30;AF=0.536;AN=56;BaseQRankSum=10.464;DP=620;FS=147.463;HRun=0;HaplotypeScore=98.8732;InbreedingCoeff=-0.4441;MQ=56.83;MQ0=24;MQRankSum=9.690;QD=6.05;ReadPosRankSum=9.329;VQSLOD=1.0651;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:22,23:44:99:148,0,119	0/0:10,0:10:29.16:0,29,193	0/1:36,0:8:4.45:4,0,99	0/0:29,0:5:2.25:0,2,51	0/1:40,0:40:46.89:47,0,184	1/1:14,0:14:11.23:144,11,0	1/1:18,0:18:12.84:246,13,0	0/1:16,17:33:99:254,0,140	0/1:11,0:11:10.41:10,0,105	0/1:24,1:23:99:120,0,140	0/1:19,0:18:30.45:30,0,58	0/1:13,0:13:38.82:46,0,39	1/1:20,0:20:3.63:245,4,0	1/1:22,0:22:33.13:327,33,0	0/1:13,0:13:65.44:93,0,65	0/1:21,0:21:76.17:200,0,76	0/0:17,0:16:14.95:0,15,62	0/1:16,0:14:53.13:74,0,53	0/1:10,8:17:47.01:145,0,47	0/1:19,19:38:99:231,0,123	0/1:15,0:15:11.19:105,0,11	0/1:16,0:15:27.07:85,0,27	0/1:21,0:20:5.10:144,0,5	1/1:18,0:18:40.59:297,41,0	0/1:23,0:23:99:128,0,199	0/1:10,15:25:76.82:201,0,77	0/1:13,15:27:13.14:13,0,106	0/1:15,0:15:75.23:75,0,90
chr10	42038433	.	A	AGAAC	10694.32	PASS	AB=0.946;AC=40;AF=0.714;AN=56;BaseQRankSum=-4.036;DP=614;FS=36.932;HRun=0;HaplotypeScore=123.4564;InbreedingCoeff=0.1776;MQ=62.31;MQ0=22;MQRankSum=6.484;QD=20.69;ReadPosRankSum=6.236;VQSLOD=2.4757;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:44,0:44:1.94:470,2,0	0/0:10,0:10:21.11:0,21,227	0/0:39,0:11:16.09:0,16,202	0/0:30,0:8:11.87:0,12,119	0/1:23,14:42:76.37:360,0,76	1/1:12,0:12:22.11:365,22,0	1/1:17,0:17:30.75:655,31,0	0/1:31,0:32:8.32:660,0,8	0/1:13,0:13:10.06:150,0,10	1/1:12,0:22:1.17:460,1,0	1/1:4,9:16:13.29:197,13,0	0/1:12,0:12:57.10:203,0,57	1/1:19,0:19:2.63:794,3,0	1/1:24,0:24:41.36:878,41,0	1/1:14,0:14:6.53:293,7,0	1/1:22,0:22:17.38:557,17,0	0/0:18,0:17:20.99:0,21,205	0/1:17,0:16:31.08:250,0,31	0/1:17,0:16:26.13:412,0,26	1/1:32,0:31:28.53:611,29,0	1/1:15,0:15:24.59:372,25,0	0/1:17,0:16:45.13:241,0,45	1/1:21,0:20:35.61:394,36,0	1/1:19,0:19:51.89:855,52,0	0/1:23,0:24:24.26:525,0,24	1/1:25,0:26:23.60:660,24,0	1/1:27,0:26:6.02:118,6,0	1/1:7,0:8:0.57:214,1,0
chr10	42038744	.	C	CA	8621.82	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-4.228;DP=551;FS=12.034;HRun=9;HaplotypeScore=93.9514;InbreedingCoeff=0.9701;MQ=72.47;MQ0=0;MQRankSum=-3.018;QD=16.68;ReadPosRankSum=3.794;VQSLOD=3.9578;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,18:23:53.17:578,53,0	0/0:7,0:7:11.99:0,12,104	0/0:12,0:12:23.01:0,23,185	0/0:14,0:13:29.39:0,29,218	1/1:4,32:36:75.20:829,75,0	1/1:2,0:23:51.13:255,51,0	1/1:3,0:18:36.93:185,37,0	1/1:7,1:31:56.04:282,56,0	1/1:2,14:16:33.09:365,33,0	1/1:4,18:22:51.12:554,51,0	1/1:1,10:11:27.07:299,27,0	1/1:1,1:17:42.61:213,43,0	1/1:2,0:21:53.93:268,54,0	1/1:2,1:23:42.78:232,43,0	1/1:3,20:23:54.15:597,54,0	1/1:2,19:21:60.13:651,60,0	1/1:2,20:23:50.97:545,51,0	1/1:2,15:17:39.09:423,39,0	1/1:5,0:20:38.91:208,39,0	1/1:2,0:23:43.68:265,44,0	1/1:1,0:6:12.35:60,12,0	1/1:2,2:23:51.11:266,51,0	1/1:0,0:22:56.95:291,57,0	1/1:1,0:12:27.38:133,27,0	1/1:4,16:20:42.11:465,42,0	1/1:3,1:22:51.92:292,52,0	1/1:4,0:30:57.26:292,57,0	1/1:0,0:12:14.38:73,14,0
chr10	42039057	.	GT	G	356.40	PASS	AB=1.000;AC=20;AF=0.385;AN=52;BaseQRankSum=4.201;DP=212;FS=2.983;HRun=2;HaplotypeScore=70.4153;InbreedingCoeff=0.5275;MQ=68.83;MQ0=0;MQRankSum=-5.229;QD=3.36;ReadPosRankSum=-0.525;VQSLOD=0.0649;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:8,2:10:11.42:77,11,0	./.	0/0:21,0:11:23.73:0,24,304	0/0:17,0:9:19.48:0,19,172	0/1:2,0:2:13.31:19,0,13	1/1:7,0:7:3.83:20,4,0	1/1:9,0:9:11.53:90,12,0	0/0:14,0:14:25.96:0,26,154	0/0:4,0:4:11.78:0,12,91	0/0:8,0:8:24.04:0,24,319	0/0:2,0:2:6.02:0,6,90	0/1:14,0:14:11.58:25,0,12	1/1:14,0:14:8.18:42,8,0	1/1:14,0:14:9.84:41,10,0	0/0:10,0:10:30.10:0,30,449	0/0:6,0:6:17.64:0,18,115	0/0:4,0:4:12.04:0,12,180	0/0:4,0:4:12.02:0,12,159	0/0:3,0:3:8.11:0,8,46	0/0:3,0:3:8.77:0,9,52	0/0:4,0:4:11.69:0,12,71	1/1:7,0:7:6.29:38,6,0	1/1:12,0:12:3.06:95,3,0	1/1:1,2:3:6.02:68,6,0	0/0:6,0:6:18.06:0,18,270	0/1:11,0:11:5.08:5,0,99	0/1:3,0:3:14.02:14,0,28	./.
chr10	42039059	.	TC	T	433.35	PASS	AB=0.824;AC=17;AF=0.327;AN=52;BaseQRankSum=5.371;DP=194;FS=2.968;HRun=2;HaplotypeScore=63.5772;InbreedingCoeff=0.7098;MQ=71.05;MQ0=0;MQRankSum=-4.886;QD=5.49;ReadPosRankSum=0.532;VQSLOD=0.7392;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,0:9:9.38:71,9,0	./.	0/0:18,1:11:23.83:0,24,280	0/0:16,1:9:12.83:0,13,172	0/0:1,0:1:3.01:0,3,44	1/1:6,0:6:3.83:19,4,0	1/1:7,2:9:8.13:106,8,0	0/0:12,0:12:33.09:0,33,440	0/0:4,0:4:12.04:0,12,174	0/0:7,0:7:18.05:0,18,250	0/0:2,0:2:6.02:0,6,89	0/1:11,3:14:11.28:60,0,11	1/1:10,2:12:8.49:52,8,0	1/1:8,5:13:12.44:67,12,0	0/0:10,0:10:30.10:0,30,447	0/0:6,0:6:18.06:0,18,259	0/0:4,0:4:12.04:0,12,180	0/0:4,0:4:9.03:0,9,133	0/0:3,0:3:8.24:0,8,93	0/0:3,0:3:9.03:0,9,130	0/0:4,0:4:12.04:0,12,172	1/1:3,2:5:9.76:66,10,0	1/1:6,2:8:12.03:101,12,0	1/1:3,0:3:6.02:68,6,0	0/0:6,0:6:18.06:0,18,266	0/0:10,0:10:27.07:0,27,357	0/0:3,0:3:6.02:0,6,78	./.
chr10	42039074	.	T	TCCC	859.56	PASS	AB=0.625;AC=9;AF=0.205;AN=44;BaseQRankSum=2.733;DP=110;FS=0.000;HRun=5;HaplotypeScore=47.7242;InbreedingCoeff=0.4492;MQ=70.54;MQ0=0;MQRankSum=-3.527;QD=22.04;ReadPosRankSum=2.367;VQSLOD=-0.4848;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:5,0:3:8.04:0,8,82	0/0:8,0:6:6.41:0,6,59	0/0:1,0:1:3.01:0,3,44	1/1:0,0:3:3.01:53,3,0	0/0:4,0:4:3.19:0,3,15	0/0:6,0:6:12.47:0,12,138	0/0:3,0:3:9.01:0,9,122	0/0:4,0:4:6.02:0,6,102	0/0:1,0:1:3:0,3,25	0/1:4,6:10:3.34:250,0,3	1/1:2,7:9:17.93:263,18,0	1/1:6,5:12:15.05:319,15,0	0/0:5,0:5:12.01:0,12,150	0/0:5,0:5:12.04:0,12,211	0/0:3,0:3:3.01:0,3,53	0/0:1,0:1:2.99:0,3,24	0/0:2,0:2:3.48:0,3,30	0/0:3,0:3:5.99:0,6,50	./.	1/1:2,3:5:4.27:104,4,0	./.	./.	0/0:4,0:4:12.02:0,12,180	0/0:2,0:2:6.02:0,6,75	0/0:2,0:2:2.68:0,3,11	./.
chr10	42039532	.	TCCC	T	2349.65	PASS	AB=0.937;AC=23;AF=0.442;AN=52;BaseQRankSum=-2.593;DP=269;FS=1.563;HRun=3;HaplotypeScore=84.7663;InbreedingCoeff=-0.3429;MQ=55.34;MQ0=1;MQRankSum=-2.020;QD=10.88;ReadPosRankSum=-2.551;VQSLOD=-0.6345;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:19,0:19:91.84:274,0,92	./.	0/1:18,0:10:0.36:0,0,349	0/0:17,0:13:23.26:0,23,463	0/1:6,7:13:22.30:25,0,22	0/1:11,0:11:62.70:63,0,84	0/1:18,2:20:99:323,0,150	0/1:9,2:12:56.55:218,0,57	1/1:3,7:10:21.06:291,21,0	0/1:7,0:7:20.05:20,0,135	1/1:7,0:7:18.53:154,19,0	0/1:11,0:11:49.50:50,0,138	0/1:6,0:6:66.72:95,0,67	0/1:9,0:9:69.23:100,0,69	0/1:6,0:6:20.83:143,0,21	0/1:3,5:8:57:182,0,57	0/0:17,0:17:13.46:0,13,975	0/0:2,0:2:5.06:0,5,21	0/0:3,0:3:4.28:0,4,74	0/1:11,0:11:85.26:85,0,99	0/0:2,0:2:0.78:0,1,35	0/1:17,0:17:89.66:140,0,90	0/1:13,0:13:85.55:86,0,121	0/1:9,0:9:4.52:81,0,5	1/1:4,0:4:12.03:127,12,0	0/0:12,0:12:36.11:0,36,452	0/1:4,0:4:49.82:50,0,65	./.
chr10	42039535	.	C	CTCT	9563.11	PASS	AB=0.944;AC=47;AF=0.904;AN=52;BaseQRankSum=-2.750;DP=304;FS=5.322;HRun=0;HaplotypeScore=74.5424;InbreedingCoeff=0.4503;MQ=62.24;MQ0=1;MQRankSum=-5.404;QD=36.92;ReadPosRankSum=2.571;VQSLOD=5.1884;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,19:23:47.89:950,48,0	./.	0/0:24,0:14:0.20:0,0,290	0/0:20,0:16:11.47:0,11,298	1/1:9,4:13:6.49:99,6,0	1/1:5,6:11:13.72:317,14,0	1/1:11,11:22:44.66:838,45,0	1/1:7,5:12:27.07:559,27,0	1/1:9,3:12:24.07:453,24,0	1/1:0,8:9:24.07:463,24,0	1/1:1,7:8:19.31:370,19,0	1/1:6,5:11:11.62:264,12,0	1/1:0,6:6:18.06:394,18,0	1/1:5,6:11:19.31:399,19,0	1/1:0,7:8:18.06:395,18,0	1/1:8,2:10:27.03:450,27,0	0/1:16,1:17:20.53:21,0,627	1/1:1,2:3:6.02:132,6,0	1/1:1,2:3:9.01:156,9,0	1/1:0,13:13:27.09:594,27,0	1/1:0,3:3:6.02:104,6,0	1/1:4,13:19:30.10:632,30,0	1/1:2,12:15:24.08:499,24,0	1/1:2,7:9:4.75:128,5,0	1/1:0,4:4:12.04:263,12,0	1/1:0,12:13:39.13:820,39,0	1/1:0,4:4:12.04:264,12,0	./.
chr10	42040901	.	G	GAC	1616.95	PASS	AB=0.864;AC=14;AF=0.280;AN=50;BaseQRankSum=-8.184;DP=495;FS=0.000;HRun=0;HaplotypeScore=112.8700;InbreedingCoeff=-0.0914;MQ=58.31;MQ0=15;MQRankSum=3.447;QD=6.08;ReadPosRankSum=-1.535;VQSLOD=2.8228;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:21,0:31:0.14:0,0,0	0/0:7,0:7:15.48:0,15,153	./.	./.	0/0:10,0:14:11.36:0,11,56	0/1:17,4:21:14.92:186,0,15	0/1:18,4:22:14.88:207,0,15	0/0:14,0:14:2.87:0,3,15	0/1:6,0:9:3.26:3,0,9	0/0:5,0:17:11.36:0,11,56	0/0:3,0:9:0:0,0,0	0/1:13,3:16:21.05:122,0,21	0/1:12,2:13:5.45:175,0,5	0/1:12,7:21:48.14:288,0,48	0/0:4,0:19:9.80:0,10,38	0/0:8,0:17:16.95:0,17,82	0/0:15,0:18:2.84:0,3,14	0/0:6,0:8:5.68:0,6,28	0/1:16,0:15:4.91:5,0,48	0/0:15,0:15:10.98:0,11,49	0/1:39,0:35:30.25:30,0,45	1/1:7,8:17:11.48:303,11,0	0/1:11,6:15:23.92:81,0,24	0/1:16,8:24:32.96:348,0,33	./.	0/1:18,0:18:2.96:3,0,72	0/0:11,0:11:11.01:0,11,50	0/0:16,0:16:28:0,28,140
chr10	42040937	.	CACAG	C	1755.81	PASS	AB=0.984;AC=16;AF=0.286;AN=56;BaseQRankSum=4.493;DP=529;FS=9.920;HRun=0;HaplotypeScore=165.9398;InbreedingCoeff=0.5131;MQ=46.22;MQ0=17;MQRankSum=-5.699;QD=9.44;ReadPosRankSum=0.294;VQSLOD=2.1305;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:11.67:0,12,76	0/0:12,0:12:34.66:0,35,520	0/0:26,0:4:8.51:0,9,43	0/0:25,0:2:4.99:0,5,24	0/0:18,0:18:20.94:0,21,167	0/0:18,0:18:29.92:0,30,612	0/0:22,0:22:50.88:0,51,644	0/1:12,0:12:13.79:114,0,14	0/1:14,1:15:21.23:21,0,141	0/1:17,0:17:20.51:21,0,36	0/0:13,0:13:13.52:0,14,112	0/0:18,0:18:40.17:0,40,644	0/0:16,0:15:29.31:0,29,467	0/0:31,0:31:67.99:0,68,1060	0/1:22,0:22:28.72:53,0,29	0/0:15,0:15:4.32:0,4,147	0/0:14,0:14:17.66:0,18,178	0/0:11,0:11:9.05:0,9,112	1/1:3,14:19:48.43:412,48,0	1/1:13,0:13:16.72:120,17,0	1/1:34,0:33:24.03:288,24,0	0/0:23,0:21:37.77:0,38,647	0/0:17,0:17:23.78:0,24,488	0/0:25,0:25:54.21:0,54,992	0/0:9,0:8:1.62:0,2,35	1/1:20,0:21:38.85:358,39,0	1/1:14,0:15:36.43:268,36,0	1/1:15,0:18:0.46:283,0,0
chr10	42040941	.	GA	G	376.72	PASS	AB=0.847;AC=10;AF=0.179;AN=56;BaseQRankSum=3.399;DP=523;FS=6.090;HRun=1;HaplotypeScore=154.7848;InbreedingCoeff=0.1992;MQ=46.50;MQ0=16;MQRankSum=1.323;QD=2.88;ReadPosRankSum=0.779;VQSLOD=-0.1619;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:26:7.80:0,8,137	0/0:11,0:11:33.11:0,33,508	0/0:34,0:6:14.40:0,14,155	0/0:31,0:5:8.06:0,8,101	0/0:16,0:16:20.59:0,21,266	0/0:18,0:18:27.45:0,27,376	0/0:22,0:22:49.85:0,50,726	0/1:10,0:10:15.66:16,0,33	0/0:14,0:14:22.21:0,22,299	0/0:18,0:17:29.93:0,30,320	0/0:12,0:12:14.08:0,14,199	0/0:18,0:18:40.69:0,41,591	0/0:16,0:15:29.29:0,29,380	0/0:31,0:31:62.96:0,63,911	0/0:22,0:22:14.72:0,15,135	0/0:14,0:14:26.64:0,27,332	0/0:15,0:15:33.04:0,33,493	0/0:12,0:12:30.03:0,30,404	0/1:15,4:19:54.26:54,0,94	1/1:8,5:13:16.32:103,16,0	1/1:23,5:27:0.40:60,0,0	0/0:21,0:19:36.65:0,37,547	0/0:16,0:16:25.68:0,26,360	0/0:23,0:23:47.65:0,48,715	0/1:10,0:10:1.94:2,0,96	0/1:15,5:20:61.59:97,0,62	0/1:10,4:14:52.68:53,0,67	0/1:9,8:17:8.79:133,0,9
chr10	42040960	.	T	TTGTGTG	4204.75	PASS	AB=1.000;AC=51;AF=0.944;AN=54;BaseQRankSum=0.102;DP=597;FS=4.655;HRun=0;HaplotypeScore=206.3932;InbreedingCoeff=0.3530;MQ=47.19;MQ0=18;MQRankSum=-2.585;QD=7.67;ReadPosRankSum=-1.354;VQSLOD=2.4470;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:29:12.93:121,13,0	0/0:13,0:13:21.07:0,21,384	1/1:36,0:10:0.47:1,0,0	./.	1/1:21,0:21:3.01:49,3,0	1/1:17,0:19:11.98:135,12,0	1/1:17,8:27:9.50:148,10,0	1/1:18,0:17:23.88:278,24,0	1/1:17,0:16:3.01:45,3,0	1/1:18,2:19:22.43:494,22,0	1/1:11,1:13:15.04:259,15,0	1/1:16,0:18:3.90:40,4,0	1/1:12,0:17:3.45:79,3,0	1/1:27,0:29:11.54:239,12,0	1/1:22,5:29:42.11:715,42,0	0/1:12,0:12:0:0,0,0	1/1:10,0:16:9.03:208,9,0	1/1:7,7:17:7.66:288,8,0	1/1:25,0:24:16.92:148,17,0	1/1:22,0:22:2.66:26,3,0	1/1:23,0:22:6.44:62,6,0	1/1:25,0:24:5.05:55,5,0	1/1:19,0:20:5.09:49,5,0	1/1:23,0:24:8.05:97,8,0	1/1:5,6:15:24.08:381,24,0	1/1:22,1:21:17.47:193,17,0	1/1:15,0:15:5.66:60,6,0	1/1:15,0:15:5.92:32,6,0
chr10	42041239	.	CTAA	C	3676.99	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=11.204;DP=558;FS=0.000;HRun=0;HaplotypeScore=80.2762;InbreedingCoeff=0.9955;MQ=67.75;MQ0=0;MQRankSum=0.094;QD=40.86;ReadPosRankSum=2.785;VQSLOD=4.2803;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,111,2401	0/0:10,0:10:30.10:0,30,605	0/0:16,0:16:30.08:0,30,586	0/0:14,0:14:36.12:0,36,757	0/0:27,0:27:78.27:0,78,1721	0/0:20,0:20:60.21:0,60,1305	0/0:22,0:22:66.23:0,66,1418	0/0:28,0:28:81.26:0,81,1711	0/0:27,0:27:72.23:0,72,1546	1/1:2,31:32:90.29:1412,90,0	1/1:0,12:12:33.11:530,33,0	0/0:17,0:17:45.15:0,45,980	0/0:24,0:24:72.25:0,72,1556	0/0:12,0:12:33.11:0,33,728	1/1:0,14:14:36.12:578,36,0	0/0:19,0:19:51.18:0,51,1125	0/0:29,0:29:81.28:0,81,1788	1/1:3,18:21:45.15:723,45,0	0/0:27,0:27:78.27:0,78,1723	0/0:23,0:23:60.18:0,60,1242	0/0:13,0:13:39.13:0,39,860	0/0:20,0:20:60.21:0,60,1277	0/0:14,0:14:33.11:0,33,699	0/0:13,0:13:39.13:0,39,857	1/1:1,9:10:27.09:434,27,0	0/0:21,1:22:14.99:0,15,1276	0/0:16,0:16:48.16:0,48,1047	0/0:16,0:16:48.16:0,48,1036
chr10	42042377	.	A	ACACACACA	9185.51	PASS	AB=1.000;AC=49;AF=0.875;AN=56;BaseQRankSum=0.520;DP=587;FS=21.784;HRun=0;HaplotypeScore=204.9457;InbreedingCoeff=0.3952;MQ=52.69;MQ0=12;MQRankSum=-2.466;QD=16.09;ReadPosRankSum=2.481;VQSLOD=2.3837;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:25:17.97:222,18,0	0/0:9,0:9:24.07:0,24,566	0/1:37,0:16:3.13:3,0,71	0/1:23,0:9:12.16:23,0,12	1/1:36,0:35:7.63:210,8,0	1/1:22,0:22:17.96:377,18,0	1/1:28,0:27:24.16:434,24,0	1/1:20,0:20:23.64:286,24,0	1/1:8,7:16:3.43:83,3,0	1/1:26,0:24:35.74:702,36,0	1/1:20,0:20:17.36:192,17,0	1/1:20,0:20:24.05:582,24,0	1/1:22,0:22:24.08:684,24,0	1/1:26,0:23:17.94:537,18,0	1/1:10,0:10:3.01:72,3,0	1/1:23,0:23:24.08:772,24,0	1/1:22,0:22:18.06:648,18,0	0/1:9,0:9:3.92:150,0,4	1/1:31,0:26:41.90:778,42,0	1/1:33,0:31:14.98:424,15,0	0/0:7,0:7:2.96:0,3,19	1/1:16,0:16:5.89:92,6,0	1/1:16,0:16:8.03:55,8,0	1/1:17,0:17:10.51:268,11,0	1/1:21,0:21:15.04:309,15,0	1/1:23,0:23:35.79:558,36,0	1/1:20,0:18:29.85:609,30,0	1/1:8,0:8:6:117,6,0
chr10	42043741	.	AGT	A	4828.58	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=14.692;DP=675;FS=5.005;HRun=0;HaplotypeScore=97.8090;InbreedingCoeff=0.9855;MQ=78.70;MQ0=4;MQRankSum=-2.617;QD=28.40;ReadPosRankSum=-1.679;VQSLOD=5.9834;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,117,1841	0/0:6,0:6:15.05:0,15,246	0/0:33,0:26:43.57:0,44,639	0/0:46,0:34:61.57:0,62,927	0/0:13,0:13:30.10:0,30,489	0/0:18,0:18:48.15:0,48,750	0/0:27,0:27:72.18:0,72,1063	1/1:10,39:48:99:1406,117,0	0/0:23,0:23:57.19:0,57,915	0/0:21,0:21:51.17:0,51,826	0/0:12,0:12:30.10:0,30,492	0/0:30,0:30:87.28:0,87,1387	0/0:24,0:24:69.24:0,69,1117	0/0:27,0:27:75.26:0,75,1219	0/0:25,0:25:63.22:0,63,1033	0/0:27,0:27:69.20:0,69,1075	0/0:25,0:25:72.21:0,72,1127	0/0:21,0:21:48.14:0,48,749	1/1:10,11:21:48.15:592,48,0	1/1:1,5:6:12.04:149,12,0	1/1:14,38:52:99:1418,117,0	0/0:12,0:12:30.10:0,30,492	0/0:14,0:14:39.13:0,39,632	0/0:33,0:33:78.25:0,78,1241	0/0:19,0:19:51.17:0,51,827	1/1:5,15:20:48.15:595,48,0	1/1:3,14:17:42.13:521,42,0	1/1:3,2:5:12.04:148,12,0
chr10	42043815	.	CTCTT	C	6704.84	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=13.657;DP=574;FS=2.835;HRun=0;HaplotypeScore=100.9911;InbreedingCoeff=0.9984;MQ=66.46;MQ0=0;MQRankSum=-5.214;QD=45.92;ReadPosRankSum=0.139;VQSLOD=5.2824;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,126,3260	0/0:7,0:7:21.06:0,21,513	0/0:27,0:27:77.88:0,78,1752	0/0:33,0:33:90.21:0,90,2065	0/0:18,0:18:54.18:0,54,1399	0/0:19,0:19:57.15:0,57,1476	0/0:21,0:21:63.13:0,63,1526	1/1:0,25:25:75.17:1276,75,0	0/0:20,0:20:57.18:0,57,1393	0/0:22,0:22:66.23:0,66,1745	0/0:14,0:14:36.06:0,36,801	0/0:22,0:22:63.13:0,63,1493	0/0:19,0:19:54.19:0,54,1440	0/0:21,0:21:60.19:0,60,1451	0/0:19,0:19:57.18:0,57,1480	0/0:21,0:21:54.18:0,54,1375	0/0:32,0:32:96.28:0,96,2497	0/0:9,0:9:27.04:0,27,557	1/1:2,19:21:54.05:855,54,0	1/1:1,8:9:24.08:418,24,0	1/1:6,30:36:83.80:1462,84,0	0/0:12,0:12:36.10:0,36,863	0/0:16,0:16:48.15:0,48,1217	0/0:22,0:22:66.23:0,66,1752	0/0:12,0:12:33.11:0,33,891	1/1:3,19:22:63.18:1085,63,0	1/1:3,21:24:63.17:1096,63,0	1/1:0,9:9:27.09:512,27,0
chr10	42043964	.	TA	T	1387.80	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=3.829;DP=341;FS=0.527;HRun=8;HaplotypeScore=64.3877;InbreedingCoeff=0.8858;MQ=69.03;MQ0=1;MQRankSum=-1.678;QD=16.14;ReadPosRankSum=-4.613;VQSLOD=2.7077;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:51.09:0,51,510	0/0:5,0:5:15.05:0,15,181	0/0:4,0:4:3.01:0,3,36	0/0:8,0:6:8.86:0,9,83	0/0:19,0:19:49.63:0,50,488	0/0:20,0:20:45.06:0,45,440	0/0:6,0:6:8.99:0,9,76	1/1:26,13:38:90.41:705,90,0	0/0:8,0:8:15.04:0,15,174	0/0:14,0:14:36.10:0,36,425	0/0:18,0:18:45.13:0,45,528	0/0:7,0:7:18.03:0,18,180	0/0:13,0:13:23.74:0,24,225	0/0:13,0:13:36.07:0,36,366	0/0:6,0:6:18.05:0,18,211	0/0:5,0:5:12.03:0,12,139	0/0:20,0:20:48:0,48,473	0/0:8,0:8:24.07:0,24,290	1/1:7,6:13:32.94:284,33,0	1/1:1,5:6:15.02:145,15,0	1/1:1,0:1:2.94:18,3,0	0/0:11,0:11:21.04:0,21,214	0/0:16,0:16:39.05:0,39,386	0/0:8,0:8:11.99:0,12,121	0/0:20,0:20:51.14:0,51,598	1/1:8,1:9:14.83:112,15,0	1/1:8,4:11:23.55:167,24,0	1/1:0,6:6:15.02:145,15,0
chr10	42043971	.	A	AGAT	1947.27	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=0.319;DP=334;FS=1.769;HRun=0;HaplotypeScore=76.4588;InbreedingCoeff=0.8746;MQ=66.15;MQ0=1;MQRankSum=-2.039;QD=23.46;ReadPosRankSum=-4.041;VQSLOD=2.6623;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:53.39:0,53,918	0/0:5,0:5:15.05:0,15,260	0/0:3,0:3:3.01:0,3,36	0/0:8,0:5:8.86:0,9,121	0/0:19,0:19:52.73:0,53,893	0/0:17,0:17:48.16:0,48,826	0/0:6,0:6:11.39:0,11,136	1/1:15,16:37:76.42:1050,76,0	0/0:7,0:7:15.05:0,15,236	0/0:14,0:14:42.14:0,42,763	0/0:15,0:15:45.15:0,45,832	0/0:8,0:8:20.43:0,20,312	0/0:12,0:12:26.88:0,27,417	0/0:17,0:17:39.13:0,39,672	0/0:6,0:6:18.06:0,18,311	0/0:6,0:6:17.51:0,18,245	0/0:18,0:18:48.16:0,48,851	0/0:10,0:10:30.07:0,30,495	1/1:7,7:14:30.84:380,31,0	1/1:5,0:5:9.22:45,9,0	1/1:0,1:1:3.01:69,3,0	0/0:9,0:9:24.07:0,24,403	0/0:17,0:17:39.13:0,39,693	0/0:8,0:8:12:0,12,183	0/0:21,0:21:58.73:0,59,1045	1/1:3,2:7:9.94:184,10,0	1/1:5,5:11:21.52:372,22,0	1/1:6,0:6:9.82:30,10,0
chr10	42043973	.	GATAT	G	3637.78	PASS	AB=0.857;AC=19;AF=0.365;AN=52;BaseQRankSum=-3.003;DP=340;FS=3.236;HRun=0;HaplotypeScore=77.7341;InbreedingCoeff=0.7767;MQ=65.65;MQ0=1;MQRankSum=1.388;QD=29.82;ReadPosRankSum=4.386;VQSLOD=3.2416;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,20:25:32.37:702,32,0	0/0:5,0:5:12.04:0,12,293	./.	./.	0/0:5,0:20:43.09:0,43,292	1/1:2,15:17:42.14:714,42,0	1/1:0,4:5:9.02:130,9,0	0/0:40,0:39:87.27:0,87,1510	0/0:4,0:8:5.79:0,6,37	0/0:14,0:14:30.10:0,30,731	0/0:14,0:16:41.72:0,42,924	1/1:0,7:7:18.06:306,18,0	1/1:0,9:11:24.07:366,24,0	1/1:4,13:17:30.10:511,30,0	0/0:5,0:6:11.83:0,12,213	0/1:5,1:6:42.04:42,0,69	0/0:3,0:18:36.37:0,36,163	0/0:10,0:10:27.09:0,27,630	0/0:14,0:14:24.08:0,24,423	0/0:5,0:5:6.02:0,6,88	0/0:2,0:2:2.74:0,3,51	1/1:2,7:9:18.06:306,18,0	1/1:3,14:17:30.10:510,30,0	1/1:3,5:8:3.01:51,3,0	0/0:22,0:23:62.58:0,63,1321	0/0:6,0:6:15.03:0,15,213	0/0:11,0:10:21.05:0,21,336	0/0:9,0:9:2.96:0,3,19
chr10	42044597	.	C	CGTGTGTATGT	4224.54	PASS	AB=0.706;AC=15;AF=0.268;AN=56;BaseQRankSum=-1.867;DP=629;FS=6.081;HRun=0;HaplotypeScore=217.5169;InbreedingCoeff=0.7656;MQ=63.50;MQ0=14;MQRankSum=-3.495;QD=22.84;ReadPosRankSum=-5.780;VQSLOD=1.9880;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:21.23:0,21,466	0/0:10,0:10:20.60:0,21,248	0/0:29,0:19:30.28:0,30,456	0/0:32,0:18:33.63:0,34,281	0/0:17,0:24:22.80:0,23,209	0/0:25,0:25:53.80:0,54,594	0/0:25,0:25:0.19:0,0,378	1/1:35,0:34:86.93:1126,87,0	0/1:14,0:24:61.24:61,0,116	0/0:23,0:25:3.55:0,4,878	0/0:18,0:19:33.02:0,33,584	0/0:23,0:22:41.65:0,42,670	0/0:23,0:23:35.99:0,36,544	0/0:23,0:23:47.46:0,47,593	0/0:22,0:22:57.04:0,57,1035	0/0:10,0:15:17.32:0,17,161	0/0:9,0:22:19.95:0,20,439	0/0:27,0:26:50.35:0,50,1092	1/1:8,10:21:45.29:870,45,0	1/1:10,13:28:6.01:292,6,0	1/1:18,0:17:23.89:205,24,0	0/0:15,0:13:29.97:0,30,460	0/0:18,0:17:32.95:0,33,632	0/0:22,0:22:2.56:0,3,324	0/0:13,0:15:36.08:0,36,844	1/1:33,0:33:81.15:1041,81,0	1/1:5,7:17:11.88:438,12,0	1/1:3,0:5:6.49:192,6,0
chr10	42044626	.	GTGTGTGTGTGTA	G	2788.02	PASS	AB=0.976;AC=14;AF=0.250;AN=56;BaseQRankSum=9.676;DP=572;FS=1.688;HRun=0;HaplotypeScore=186.8951;InbreedingCoeff=0.2797;MQ=54.40;MQ0=13;MQRankSum=-6.909;QD=11.62;ReadPosRankSum=1.916;VQSLOD=2.5480;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:32,0:32:80.34:80,0,730	0/0:9,0:9:27.07:0,27,1010	0/0:22,0:14:33.04:0,33,439	0/0:27,0:13:32.39:0,32,551	0/1:22,0:21:38.38:38,0,842	0/1:17,1:18:17.06:438,0,17	0/1:27,0:27:28:234,0,28	0/0:25,0:23:69.20:0,69,2257	0/1:22,0:22:42.76:43,0,843	0/0:23,0:23:68.01:0,68,2745	0/0:22,0:22:48.11:0,48,1989	0/1:21,1:21:0.53:409,0,1	1/1:18,0:18:27.07:460,27,0	0/1:17,2:19:4.92:364,0,5	0/0:20,0:20:51.02:0,51,2525	0/0:13,0:13:0.08:0,0,778	0/0:27,0:26:45.57:0,46,1856	0/0:27,0:27:72.86:0,73,3254	0/0:15,0:15:42.09:0,42,1636	0/0:23,0:21:33.01:0,33,865	0/0:17,0:16:13.73:0,14,229	0/1:16,0:14:32.72:198,0,33	1/1:18,2:19:24.08:528,24,0	1/1:24,0:24:9.50:165,10,0	0/0:15,0:15:42.13:0,42,2080	0/0:29,0:29:82.45:0,82,2760	0/0:13,0:13:23.91:0,24,843	0/0:5,0:5:10.81:0,11,225
chr10	42044628	.	GTGTGTGTGTA	G	4873.77	PASS	AB=0.906;AC=19;AF=0.339;AN=56;BaseQRankSum=7.198;DP=553;FS=1.658;HRun=0;HaplotypeScore=159.5692;InbreedingCoeff=0.6102;MQ=56.96;MQ0=13;MQRankSum=-6.345;QD=20.06;ReadPosRankSum=1.160;VQSLOD=4.2517;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:33:99:103,0,413	0/0:9,0:9:27.07:0,27,827	0/0:23,0:15:12.74:0,13,401	0/0:27,0:13:27.75:0,28,458	0/1:21,0:20:41.39:41,0,621	1/1:3,16:19:24.08:753,24,0	0/1:3,23:26:1.73:504,0,2	0/0:27,0:25:72.14:0,72,1848	0/1:22,0:22:42.78:43,0,644	0/0:21,0:21:63.18:0,63,2241	0/0:21,0:21:45.10:0,45,1658	1/1:4,19:22:20.35:675,20,0	1/1:3,14:17:24.08:804,24,0	1/1:2,11:13:15.05:452,15,0	0/0:19,0:19:47.89:0,48,2062	0/1:13,0:13:23.83:24,0,602	0/0:26,0:26:45.99:0,46,1543	0/0:27,0:27:71.20:0,71,2735	0/0:13,0:13:36.05:0,36,1149	0/0:20,0:18:32.98:0,33,712	0/0:17,0:16:13.74:0,14,203	1/1:2,12:12:12.04:398,12,0	1/1:2,19:20:24:735,24,0	1/1:2,19:21:12.04:343,12,0	0/0:15,0:15:42.12:0,42,1746	0/0:28,0:28:81.20:0,81,2231	0/0:11,0:11:24.05:0,24,685	0/0:5,0:5:10.55:0,11,198
chr10	42044632	.	GTGTGTA	G	2829.01	PASS	AB=0.968;AC=20;AF=0.357;AN=56;BaseQRankSum=9.525;DP=538;FS=6.963;HRun=0;HaplotypeScore=132.9334;InbreedingCoeff=0.6626;MQ=60.24;MQ0=12;MQRankSum=-5.290;QD=12.30;ReadPosRankSum=1.036;VQSLOD=2.1353;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:23,4:27:35.86:339,0,36	0/0:7,0:7:21.04:0,21,430	0/0:23,0:16:33.20:0,33,398	0/0:24,0:16:24.50:0,25,367	0/1:21,0:20:69.33:69,0,267	1/1:17,0:17:24.08:391,24,0	1/1:25,0:25:20.57:271,21,0	0/0:27,0:25:74.94:0,75,1030	0/1:23,0:23:88.67:89,0,285	0/0:23,0:23:69.14:0,69,1422	0/0:20,0:20:45.10:0,45,1086	1/1:22,0:21:20.95:361,21,0	1/1:14,0:14:24.08:422,24,0	1/1:13,0:13:15.05:253,15,0	0/0:18,0:18:44.72:0,45,1341	0/1:15,0:15:66.72:67,0,280	0/0:29,0:28:53.81:0,54,1011	0/0:26,0:26:69.61:0,70,1737	0/0:17,0:17:48.05:0,48,824	0/0:21,0:19:35.98:0,36,527	0/0:16,0:16:13.65:0,14,152	1/1:13,0:11:12.04:208,12,0	1/1:21,0:20:23.98:393,24,0	1/1:19,0:19:11.93:174,12,0	0/0:15,0:15:42.09:0,42,1110	0/0:25,0:25:73.98:0,74,1299	0/0:11,0:11:24.50:0,25,404	0/0:5,0:5:9.47:0,9,144
chr10	42045478	.	TAAGA	T	2007.43	PASS	AB=0.861;AC=21;AF=0.404;AN=52;BaseQRankSum=-3.121;DP=546;FS=4.427;HRun=0;HaplotypeScore=122.6937;InbreedingCoeff=0.4330;MQ=48.69;MQ0=16;MQRankSum=2.430;QD=7.72;ReadPosRankSum=-0.223;VQSLOD=2.6261;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:22:7.77:73,8,0	0/1:3,4:7:64.73:124,0,65	./.	./.	0/0:24,0:24:9.86:0,10,289	1/1:16,0:16:15:131,15,0	0/0:11,0:10:5.81:0,6,34	0/0:27,0:18:8.85:0,9,56	0/0:19,0:19:24.51:0,25,412	1/1:19,15:32:6.35:641,6,0	1/1:11,8:18:21.07:295,21,0	1/1:11,0:10:3:26,3,0	1/1:13,0:13:5.66:52,6,0	1/1:15,0:14:8.99:74,9,0	1/1:8,13:21:14.35:315,14,0	0/0:24,0:23:20.55:0,21,125	0/0:17,0:18:9.42:0,9,95	0/0:18,0:14:17.89:0,18,350	0/0:17,0:15:6.02:0,6,83	0/0:33,0:30:21.89:0,22,170	0/0:12,0:11:8.16:0,8,40	0/1:27,0:26:14.90:62,0,15	0/1:23,0:23:93.03:98,0,93	0/1:24,0:24:17.61:39,0,18	0/1:13,13:26:17.82:257,0,18	0/0:28,0:27:25.73:0,26,316	0/0:25,0:24:20.81:0,21,253	0/0:12,0:10:5.65:0,6,81
chr10	42045512	.	AGAAAGAAAGAAAGAAG	A	1852.75	PASS	AB=1.000;AC=21;AF=0.404;AN=52;BaseQRankSum=-2.419;DP=564;FS=0.668;HRun=0;HaplotypeScore=248.2458;InbreedingCoeff=0.1855;MQ=49.67;MQ0=18;MQRankSum=-2.885;QD=5.58;ReadPosRankSum=-7.652;VQSLOD=0.5969;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:23:54.43:54,0,113	0/0:10,0:10:27.04:0,27,895	./.	./.	0/1:26,0:26:86.15:86,0,1398	1/1:4,14:18:15.05:670,15,0	1/1:23,0:21:17.14:532,17,0	1/1:24,0:14:11.08:117,11,0	0/1:20,0:20:57.93:58,0,1747	0/0:33,0:32:85.67:0,86,2278	0/0:16,0:16:42:0,42,1049	1/1:11,0:11:3.01:38,3,0	1/1:15,0:15:5.99:76,6,0	0/0:14,0:13:9.03:0,9,113	0/0:21,0:22:30.37:0,30,999	0/0:20,0:19:21.54:0,22,1182	0/0:17,0:17:15.02:0,15,410	0/0:19,0:16:23.43:0,23,1124	0/1:24,0:17:62.75:63,0,480	0/1:30,0:27:10.42:10,0,1083	0/1:17,0:16:21.86:22,0,246	1/1:24,0:23:10.14:218,10,0	0/0:26,0:26:2.54:0,3,232	0/0:28,0:28:5.98:0,6,72	0/0:23,0:23:39.09:0,39,1419	0/1:34,0:32:47.78:48,0,1794	0/1:30,0:29:5.31:5,0,1311	0/1:11,0:10:28.15:28,0,297
chr10	42045516	.	AGAAAGAAAGAAG	A	2582.81	PASS	AB=1.000;AC=30;AF=0.556;AN=54;BaseQRankSum=0.215;DP=560;FS=2.636;HRun=0;HaplotypeScore=202.7721;InbreedingCoeff=0.1506;MQ=51.07;MQ0=19;MQRankSum=-4.377;QD=6.24;ReadPosRankSum=-7.057;VQSLOD=0.6601;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:24:15.80:126,0,16	0/0:11,0:11:30.03:0,30,613	1/1:6,0:1:2.04:6,2,0	./.	0/1:24,0:24:99:158,0,881	1/1:17,0:17:15.05:441,15,0	1/1:23,0:21:30.47:337,30,0	1/1:25,0:15:35.03:226,35,0	0/1:20,0:20:64.49:64,0,1156	0/0:36,0:35:59.91:0,60,1492	0/0:15,0:15:22.54:0,23,637	1/1:12,1:13:3.01:108,3,0	1/1:3,11:14:6.02:215,6,0	1/1:14,0:13:8.17:35,8,0	0/0:22,0:22:13.63:0,14,616	0/0:21,0:20:15.64:0,16,847	0/1:17,0:17:35:35,0,203	0/0:19,0:16:24.02:0,24,907	0/1:20,0:13:64.14:64,0,299	0/1:28,0:25:69.57:70,0,601	0/1:17,0:16:45.55:46,0,102	1/1:4,21:24:35.65:488,36,0	1/1:26,0:26:5.63:81,6,0	1/1:26,0:27:7.93:30,8,0	0/0:21,0:21:42.07:0,42,928	0/1:32,0:30:99:113,0,1048	0/1:29,0:28:95:95,0,750	0/1:11,0:10:27.80:28,0,202
chr10	42045520	.	AGAAAGAAG	A	3772.69	PASS	AB=1.000;AC=32;AF=0.571;AN=56;BaseQRankSum=0.435;DP=567;FS=4.019;HRun=0;HaplotypeScore=164.1323;InbreedingCoeff=0.1322;MQ=52.46;MQ0=17;MQRankSum=-4.581;QD=8.54;ReadPosRankSum=-6.653;VQSLOD=0.3745;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:7,19:25:2.04:266,2,0	0/0:11,0:11:30.02:0,30,383	1/1:9,0:2:2.04:6,2,0	0/0:3,0:1:3.01:0,3,36	0/1:24,0:24:99:232,0,453	1/1:17,0:17:15.05:303,15,0	1/1:24,0:22:34:381,34,0	1/1:27,0:17:42.26:276,42,0	0/1:20,0:20:99:127,0,613	0/0:37,0:36:44.16:0,44,841	0/0:14,0:14:5:0,5,328	1/1:1,13:14:3.01:62,3,0	1/1:14,0:14:6.02:125,6,0	1/1:2,12:13:11.87:257,12,0	0/1:22,0:22:10.44:10,0,256	0/0:4,0:21:11.28:0,11,487	0/1:18,0:18:41.41:41,0,190	0/0:17,0:14:23.91:0,24,618	0/1:18,0:12:66.78:67,0,124	0/1:27,0:25:99:121,0,263	0/1:17,0:16:43.40:64,0,43	1/1:24,0:23:35.65:352,36,0	1/1:8,18:26:23.53:449,24,0	1/1:4,22:26:8.82:174,9,0	0/0:21,0:21:41.99:0,42,492	0/1:33,0:31:99:218,0,509	0/1:32,0:31:99:215,0,343	0/1:10,0:9:27.16:27,0,109
chr10	42045524	.	A	AG	1834.71	PASS	AB=0.885;AC=14;AF=0.250;AN=56;BaseQRankSum=6.295;DP=554;FS=0.000;HRun=1;HaplotypeScore=120.5412;InbreedingCoeff=0.3019;MQ=52.31;MQ0=15;MQRankSum=-8.025;QD=7.91;ReadPosRankSum=-0.454;VQSLOD=0.3594;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:24:32.93:33,0,47	0/0:11,0:11:29.89:0,30,318	0/0:10,0:3:2.44:0,2,7	0/0:3,0:2:3.01:0,3,39	0/0:24,0:24:68.79:0,69,714	0/0:15,1:16:12.10:0,12,41	0/0:22,2:22:49.98:0,50,545	0/1:16,10:18:19.46:194,0,19	0/0:19,0:19:34.99:0,35,530	0/0:35,1:35:55.82:0,56,900	0/0:15,0:15:44.58:0,45,421	0/0:14,0:14:2.37:0,2,8	0/0:11,0:11:4.72:0,5,16	0/0:13,1:13:10.24:0,10,42	0/1:20,1:21:46.28:46,0,166	0/0:22,0:21:6.41:0,6,72	0/0:16,1:17:26.63:0,27,260	0/0:15,1:14:24.08:0,24,307	1/1:15,6:16:5.86:307,6,0	1/1:22,4:24:28.40:337,28,0	0/1:14,3:16:56.79:113,0,57	0/0:21,2:22:25.63:0,26,222	0/1:21,1:22:16.96:17,0,113	0/0:25,0:25:7.98:0,8,54	0/0:22,0:22:41.71:0,42,408	0/1:27,7:32:99:325,0,193	1/1:24,5:28:27.94:521,28,0	1/1:8,2:9:11.95:111,12,0
chr10	42045525	.	G	GA	1174.66	PASS	AB=0.939;AC=14;AF=0.250;AN=56;BaseQRankSum=5.928;DP=555;FS=18.270;HRun=3;HaplotypeScore=125.4909;InbreedingCoeff=0.3260;MQ=52.59;MQ0=14;MQRankSum=-6.373;QD=5.09;ReadPosRankSum=-0.063;VQSLOD=-0.5659;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:23,2:24:26.11:26,0,32	0/0:12,0:12:29.80:0,30,278	0/0:11,1:5:3.38:0,3,11	0/0:3,0:2:6:0,6,61	0/0:24,0:24:57.86:0,58,287	0/0:16,0:16:11.40:0,11,35	0/0:24,0:22:30.48:0,30,227	0/1:28,0:20:5.82:6,0,48	0/0:20,0:20:47.66:0,48,215	0/0:36,0:35:80.89:0,81,904	0/0:15,0:15:40.51:0,41,409	0/0:14,0:14:2.22:0,2,7	0/0:11,0:11:4.42:0,4,13	0/0:14,0:13:9.17:0,9,35	0/0:21,0:21:2.71:0,3,183	1/1:21,0:20:15.80:63,16,0	0/0:17,0:17:21.01:0,21,207	0/0:15,0:13:26.97:0,27,298	0/1:19,2:16:10.70:86,0,11	1/1:19,7:24:45.38:422,45,0	0/1:16,1:16:13.45:13,0,61	0/0:23,0:22:24.93:0,25,143	0/1:20,0:20:5.31:5,0,53	0/0:25,0:25:7.29:0,7,35	0/0:22,0:22:44.62:0,45,391	0/1:28,6:32:69.97:259,0,70	1/1:23,6:28:6.82:380,7,0	1/1:9,1:9:8.46:77,8,0
chr10	42045529	.	GA	G	1548.97	PASS	AB=0.894;AC=21;AF=0.375;AN=56;BaseQRankSum=11.466;DP=550;FS=0.000;HRun=3;HaplotypeScore=122.1967;InbreedingCoeff=0.2774;MQ=54.18;MQ0=12;MQRankSum=-10.124;QD=5.08;ReadPosRankSum=3.069;VQSLOD=0.4832;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:23,2:24:14.49:14,0,29	0/0:12,0:12:33.10:0,33,432	0/0:12,0:5:12.99:0,13,124	0/0:4,0:3:6.02:0,6,86	0/0:24,0:24:62.74:0,63,578	1/1:15,1:16:9.75:29,10,0	0/0:22,1:21:50.77:0,51,413	0/1:10,15:18:26.20:227,0,26	0/0:20,2:22:18.77:0,19,509	0/0:35,1:35:99:0,101,1276	0/0:15,0:15:45.09:0,45,554	1/1:14,0:14:2.04:6,2,0	0/1:12,0:12:5.14:5,0,19	0/1:14,0:13:6.93:7,0,26	0/1:20,3:23:7.02:7,0,351	0/0:19,2:21:5.31:0,5,221	0/0:17,0:17:30.06:0,30,365	0/0:13,0:11:27.09:0,27,386	1/1:11,7:16:7.85:267,8,0	1/1:22,4:24:13.77:174,14,0	0/1:13,3:15:64.15:79,0,64	0/0:23,0:22:10.73:0,11,199	0/1:19,0:19:9.89:10,0,48	0/1:24,0:24:3.21:3,0,29	0/0:23,0:23:48.13:0,48,599	0/1:24,10:32:99:353,0,143	1/1:23,6:28:34.37:476,34,0	1/1:8,2:9:11.61:67,12,0
chr10	42045530	.	A	AAGG	3092.51	PASS	AB=0.956;AC=15;AF=0.268;AN=56;BaseQRankSum=5.588;DP=551;FS=0.000;HRun=0;HaplotypeScore=131.8614;InbreedingCoeff=0.2956;MQ=54.21;MQ0=11;MQRankSum=-8.741;QD=12.52;ReadPosRankSum=0.061;VQSLOD=3.1671;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:24:29.46:29,0,108	0/0:12,0:12:33.11:0,33,560	0/0:12,0:5:12.45:0,12,131	0/0:4,0:3:6.02:0,6,96	0/0:23,0:23:63.10:0,63,939	0/0:16,0:16:14.93:0,15,110	0/0:22,0:21:51.13:0,51,788	1/1:25,0:18:28.35:304,28,0	0/1:22,0:22:24.70:25,0,736	0/0:36,0:35:77.91:0,78,1666	0/0:15,0:15:45.04:0,45,717	0/0:14,0:14:2.98:0,3,22	0/0:14,0:14:8.97:0,9,70	0/0:14,0:13:11.96:0,12,98	0/1:22,0:22:33.64:34,0,515	0/1:19,1:20:23.50:24,0,42	0/0:17,0:17:29.95:0,30,380	0/0:13,0:11:27.09:0,27,451	0/1:14,2:14:10.59:393,0,11	1/1:19,7:24:43.65:466,44,0	0/1:16,0:15:82.68:102,0,83	0/0:23,0:22:27.09:0,27,336	0/0:19,0:19:5.91:0,6,160	0/0:25,0:25:8.98:0,9,76	0/0:25,0:25:48.16:0,48,810	0/1:29,6:33:99:799,0,138	1/1:24,6:29:47.62:919,48,0	1/1:8,2:9:11.63:175,12,0
chr10	42047452	.	TA	T	9572	PASS	AB=0.941;AC=50;AF=0.893;AN=56;BaseQRankSum=4.683;DP=507;FS=9.459;HRun=10;HaplotypeScore=61.0146;InbreedingCoeff=0.5641;MQ=69.94;MQ0=0;MQRankSum=-0.818;QD=19.90;ReadPosRankSum=1.070;VQSLOD=5.5436;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,18:21:47.99:417,48,0	0/1:13,2:15:13:13,0,326	0/1:13,0:10:5.35:5,0,51	0/0:12,0:10:2.65:0,3,37	1/1:2,19:21:53.62:461,54,0	1/1:3,23:26:68.98:599,69,0	1/1:5,10:15:26.98:234,27,0	1/1:1,24:25:71.89:609,72,0	1/1:1,20:21:56.99:495,57,0	1/1:0,28:28:83.64:707,84,0	1/1:3,26:29:71.93:618,72,0	1/1:0,12:12:32.99:286,33,0	1/1:1,13:14:29.99:260,30,0	1/1:4,17:21:41.98:365,42,0	1/1:2,9:11:23.99:208,24,0	1/1:1,10:11:29.99:260,30,0	0/0:14,0:14:33.07:0,33,355	1/1:1,9:10:23.98:208,24,0	1/1:6,11:17:32.74:283,33,0	1/1:3,16:19:44.97:391,45,0	1/1:3,11:14:32.99:286,33,0	1/1:2,16:18:47.99:417,48,0	1/1:3,15:18:41.99:365,42,0	1/1:5,16:21:44.97:391,45,0	1/1:0,12:12:26.99:234,27,0	1/1:5,28:33:83.68:705,84,0	1/1:5,28:33:83.98:729,84,0	1/1:0,3:3:3:26,3,0
chr10	42048103	.	GA	G	6055.40	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=13.712;DP=537;FS=3.376;HRun=8;HaplotypeScore=50.7457;InbreedingCoeff=0.9743;MQ=74.93;MQ0=0;MQRankSum=0.265;QD=25.88;ReadPosRankSum=-1.671;VQSLOD=4.9893;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:36.11:0,36,434	0/0:10,0:10:21.04:0,21,234	0/0:16,0:16:24.53:0,25,276	0/0:10,0:10:15.04:0,15,175	1/1:1,40:41:99:1091,114,0	0/0:28,0:28:75.23:0,75,905	0/0:16,0:16:45.12:0,45,531	1/1:6,33:39:96.10:918,96,0	1/1:1,13:14:27.04:261,27,0	0/0:25,0:25:72.22:0,72,870	0/0:32,0:32:96.29:0,96,1160	0/0:13,0:13:39.12:0,39,470	0/0:17,0:17:48.13:0,48,569	0/0:11,1:12:4.14:0,4,333	0/0:18,0:18:51.16:0,51,616	1/1:0,11:11:33.05:319,33,0	0/0:14,0:14:36.11:0,36,434	0/0:14,0:14:42.13:0,42,504	1/1:0,20:20:60.06:571,60,0	1/1:1,27:28:81.13:781,81,0	1/1:2,10:12:30.05:290,30,0	0/0:13,0:13:39.12:0,39,471	0/0:23,0:23:48.13:0,48,568	0/0:7,0:7:21.05:0,21,242	0/0:20,0:20:53.83:0,54,628	1/1:1,25:26:75.12:724,75,0	1/1:4,28:32:81.12:782,81,0	1/1:0,11:11:33.05:319,33,0
chr10	42051754	.	C	CTG	3754.84	PASS	AB=0.951;AC=28;AF=0.500;AN=56;BaseQRankSum=-0.338;DP=733;FS=0.978;HRun=0;HaplotypeScore=161.0722;InbreedingCoeff=0.1684;MQ=56.58;MQ0=7;MQRankSum=-3.992;QD=7.60;ReadPosRankSum=-5.232;VQSLOD=2.5347;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:8.68:0,9,161	0/0:17,0:17:29.67:0,30,329	0/0:24,0:14:1.05:0,1,124	0/0:23,0:20:35.94:0,36,410	0/0:37,0:37:49.77:0,50,612	0/1:28,0:28:6.05:6,0,153	0/1:27,0:26:43.17:43,0,117	1/1:41,0:40:73.65:993,74,0	0/0:20,0:20:19.34:0,19,257	1/1:12,21:34:48.95:618,49,0	0/1:20,2:22:30.88:31,0,31	0/1:27,0:28:37.62:38,0,207	0/1:23,0:23:50.80:51,0,84	0/0:23,0:23:4.55:0,5,122	1/1:23,6:29:9.02:122,9,0	0/0:16,0:16:10.29:0,10,133	0/1:26,0:25:13.23:29,0,13	1/1:3,7:10:2.45:49,2,0	1/1:16,10:24:30.86:392,31,0	0/1:14,20:34:38.99:40,0,39	0/0:14,20:32:2.29:0,2,6	0/1:25,0:25:2.54:3,0,62	0/1:24,0:24:78.49:78,0,172	0/1:28,0:28:14.98:15,0,76	1/1:5,12:17:5.31:58,5,0	1/1:14,21:35:57.31:798,57,0	1/1:14,10:23:2.96:48,3,0	1/1:11,2:12:24.08:344,24,0
chr10	42051758	.	G	GTGTGTGTGTC	2415.09	PASS	AB=0.974;AC=28;AF=0.500;AN=56;BaseQRankSum=2.000;DP=719;FS=13.774;HRun=0;HaplotypeScore=240.0027;InbreedingCoeff=0.0107;MQ=53.20;MQ0=8;MQRankSum=1.147;QD=4.63;ReadPosRankSum=-2.102;VQSLOD=0.2899;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:46,0:46:26.60:250,27,0	0/0:16,0:16:21.21:0,21,623	0/0:21,0:11:5.20:0,5,140	0/0:22,0:17:29.02:0,29,383	0/0:40,0:40:53.63:0,54,719	0/1:31,0:31:16.49:110,0,16	1/1:26,0:25:6.20:113,6,0	0/0:39,0:38:20.03:0,20,329	0/1:19,0:19:88.97:89,0,267	0/1:32,0:32:99:106,0,204	0/1:19,0:19:21.90:22,0,44	1/1:28,0:28:11.52:388,12,0	0/1:21,0:21:7.15:213,0,7	1/1:22,0:22:5.84:49,6,0	0/1:29,0:29:16.86:47,0,17	0/1:16,0:16:99:153,0,166	0/1:14,12:25:16.34:292,0,16	0/0:10,0:10:5.26:0,5,51	0/1:22,0:20:89.05:89,0,133	0/1:35,0:35:30.45:39,0,30	0/0:35,0:33:3.03:0,3,29	1/1:22,0:21:7.21:54,7,0	1/1:24,0:24:28.88:267,29,0	0/1:29,0:29:5.84:111,0,6	1/1:16,0:16:2.84:66,3,0	0/1:35,0:35:99:110,0,237	1/1:24,0:23:0.24:23,0,0	0/0:14,0:13:16.39:0,16,98
chr10	42051759	.	T	TGT	3584.46	PASS	AB=0.955;AC=28;AF=0.500;AN=56;BaseQRankSum=-0.095;DP=715;FS=0.471;HRun=0;HaplotypeScore=156.2565;InbreedingCoeff=0.1684;MQ=52.31;MQ0=9;MQRankSum=-1.376;QD=7.45;ReadPosRankSum=-2.480;VQSLOD=2.8534;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:8.68:0,9,161	0/0:16,0:16:29.67:0,30,329	0/0:21,0:11:1.05:0,1,124	0/0:21,0:16:35.94:0,36,410	0/0:40,0:40:40.61:0,41,600	0/1:31,0:31:6.05:6,0,153	0/1:25,0:25:43.18:43,0,117	1/1:38,0:38:59.47:866,59,0	0/0:19,0:19:19.34:0,19,257	1/1:32,0:32:51.83:633,52,0	0/1:7,10:19:30.88:31,0,31	0/1:28,0:28:37.62:38,0,208	0/1:20,0:20:50.79:51,0,84	0/0:22,0:22:4.55:0,5,122	1/1:29,0:29:9.02:122,9,0	0/0:15,0:15:10.29:0,10,133	0/1:25,0:24:13.23:29,0,13	1/1:10,0:10:2.45:49,2,0	1/1:21,0:19:24.88:340,25,0	0/1:34,0:35:38.99:40,0,39	0/0:35,0:32:2.29:0,2,6	0/1:22,0:21:2.48:2,0,62	0/1:25,0:25:78.49:78,0,172	0/1:29,0:29:14.98:15,0,76	1/1:18,0:18:5.31:58,5,0	1/1:35,0:35:55.09:791,55,0	1/1:23,0:22:2.96:48,3,0	1/1:14,0:13:24.08:344,24,0
chr10	42051762	.	G	GTGTGTC	2498.21	PASS	AB=0.930;AC=25;AF=0.446;AN=56;BaseQRankSum=0.542;DP=698;FS=12.857;HRun=0;HaplotypeScore=200.3503;InbreedingCoeff=0.1427;MQ=51.24;MQ0=10;MQRankSum=0.064;QD=5.53;ReadPosRankSum=0.579;VQSLOD=1.7312;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:43,0:43:41.15:111,0,41	0/0:14,0:14:30.09:0,30,577	0/0:18,0:8:5.20:0,5,142	0/0:20,0:13:35.39:0,35,440	0/0:38,0:38:50.78:0,51,733	0/1:16,11:31:49.47:175,0,49	1/1:26,0:25:21.85:238,22,0	0/0:38,0:37:68.87:0,69,429	0/1:19,0:19:18.95:19,0,312	0/1:32,0:32:75.78:198,0,76	0/1:19,0:19:20.07:20,0,43	1/1:23,5:28:11.39:502,11,0	0/1:18,1:19:2.84:352,0,3	1/1:12,10:22:3.41:48,3,0	0/1:10,0:28:15.34:105,0,15	0/1:13,0:13:64.55:65,0,168	0/1:22,0:21:9.68:140,0,10	0/0:9,0:9:4.30:0,4,28	0/1:21,0:19:9.28:9,0,193	0/1:35,0:35:7.98:8,0,97	0/0:38,0:35:8.92:0,9,69	1/1:22,0:21:7.23:110,7,0	1/1:26,1:27:28.16:334,28,0	1/1:27,1:28:15.04:183,15,0	1/1:17,0:17:2.52:60,3,0	0/0:32,0:32:60.40:0,60,306	0/0:22,0:21:15.17:0,15,116	0/0:17,0:16:22.30:0,22,108
chr10	42051764	.	G	GTGTC	1537.73	PASS	AB=0.946;AC=16;AF=0.286;AN=56;BaseQRankSum=3.256;DP=692;FS=4.123;HRun=0;HaplotypeScore=184.4187;InbreedingCoeff=-0.2775;MQ=51.00;MQ0=11;MQRankSum=2.141;QD=4.08;ReadPosRankSum=3.804;VQSLOD=2.5010;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:40,0:42:99:103,0,102	0/0:12,0:12:30.09:0,30,495	0/0:17,0:6:12:0,12,165	0/0:20,0:13:35.89:0,36,430	0/0:37,0:37:47.17:0,47,748	0/1:30,0:30:37.93:106,0,38	0/1:25,0:25:16.38:96,0,16	0/0:37,0:36:22.77:0,23,234	0/0:18,0:18:6.67:0,7,316	0/1:30,0:30:76.90:77,0,119	0/1:18,0:18:27.94:28,0,64	0/1:29,1:30:10.19:301,0,10	0/1:18,1:19:19.50:288,0,19	1/1:21,1:22:1.70:67,2,0	0/1:27,0:27:12.13:52,0,12	0/1:15,0:15:12.99:13,0,168	0/1:23,0:22:8.83:93,0,9	0/0:8,0:8:0.68:0,1,16	0/0:21,0:19:3.54:0,4,170	0/0:35,0:35:11.25:0,11,131	0/0:40,0:37:14.58:0,15,111	0/1:11,11:22:12.87:84,0,13	0/1:28,0:28:60.03:236,0,60	0/1:16,11:28:48.30:122,0,48	0/1:16,0:16:24.67:25,0,39	0/0:31,0:31:21.95:0,22,202	0/0:22,0:21:17.38:0,17,139	0/0:17,0:15:17.76:0,18,107
chr10	42051768	.	A	ATGTGTGTGTG	4734.22	PASS	AB=1.000;AC=46;AF=0.852;AN=54;BaseQRankSum=-0.749;DP=685;FS=1.384;HRun=0;HaplotypeScore=222.9731;InbreedingCoeff=0.4397;MQ=49.15;MQ0=11;MQRankSum=0.643;QD=7.90;ReadPosRankSum=-0.244;VQSLOD=3.6839;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:45,0:45:12.22:275,0,12	0/0:11,0:12:13.87:0,14,514	0/0:17,0:8:2.96:0,3,20	./.	0/0:21,0:35:2.51:0,3,7	1/1:28,0:28:12:142,12,0	1/1:23,0:22:26.72:206,27,0	1/1:37,0:36:21.17:174,21,0	1/1:9,10:21:3.01:149,3,0	1/1:29,0:31:47.45:465,47,0	1/1:16,0:16:5.36:52,5,0	1/1:30,0:30:25.34:290,25,0	1/1:18,0:18:20.09:219,20,0	1/1:20,0:20:5.67:34,6,0	1/1:23,0:25:9.02:124,9,0	1/1:7,6:15:6.02:240,6,0	1/1:26,0:25:18.28:472,18,0	1/1:8,0:8:2.84:9,3,0	1/1:19,0:18:20.64:254,21,0	1/1:36,0:36:11.92:204,12,0	1/1:40,0:37:25.51:195,26,0	1/1:22,0:21:8.91:53,9,0	1/1:29,0:29:23.43:275,23,0	1/1:25,0:25:12.06:63,12,0	1/1:15,0:17:8.83:131,9,0	1/1:29,0:29:42.55:403,43,0	1/1:21,0:20:24.21:253,24,0	0/1:17,0:14:0.55:51,0,1
chr10	42052439	.	T	TA	5822.47	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-15.149;DP=624;FS=1.509;HRun=7;HaplotypeScore=66.6682;InbreedingCoeff=0.9958;MQ=81.58;MQ0=0;MQRankSum=-2.383;QD=30.33;ReadPosRankSum=-0.749;VQSLOD=5.0183;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:96.09:0,96,911	0/0:7,0:7:18.02:0,18,174	0/0:17,0:17:35.79:0,36,312	0/0:18,0:18:17.56:0,18,245	0/0:34,0:34:96.13:0,96,921	0/0:22,0:21:48.06:0,48,458	0/0:17,0:17:42.06:0,42,406	1/1:6,24:30:72.21:858,72,0	0/0:19,0:19:51.08:0,51,492	0/0:5,0:31:46.55:0,47,139	0/0:2,0:18:32.59:0,33,96	0/0:21,0:21:45.06:0,45,435	0/0:18,0:18:45.07:0,45,435	0/0:11,0:11:33.05:0,33,319	0/0:4,0:25:36.66:0,37,108	0/0:22,0:22:60.10:0,60,579	0/0:24,0:24:63.09:0,63,608	0/0:2,0:15:24.44:0,24,72	1/1:2,22:24:69.20:820,69,0	1/1:7,33:40:99:1215,102,0	1/1:3,15:18:36.11:435,36,0	0/0:18,0:18:51.08:0,51,493	0/0:24,0:24:69.11:0,69,666	0/0:20,0:20:48.07:0,48,463	0/0:1,0:14:22.41:0,22,66	1/1:5,32:38:92.35:1154,92,0	1/1:4,24:28:72.22:870,72,0	1/1:0,14:14:39.12:471,39,0
chr10	42052905	.	TA	T	3491.75	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=4.726;DP=468;FS=2.822;HRun=9;HaplotypeScore=55.5449;InbreedingCoeff=0.9928;MQ=80.19;MQ0=0;MQRankSum=-0.918;QD=23.12;ReadPosRankSum=2.544;VQSLOD=4.6537;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,21:23:40.36:526,40,0	0/0:11,0:11:24.07:0,24,277	0/0:10,0:10:27.04:0,27,293	0/0:14,0:14:33.09:0,33,373	0/0:31,0:31:59.85:0,60,921	1/1:0,22:22:57.03:522,57,0	1/1:0,11:11:30.02:275,30,0	0/0:21,0:21:54.15:0,54,616	0/0:15,0:15:39.12:0,39,450	0/0:2,0:21:55.73:0,56,314	0/0:3,0:28:71.62:0,72,392	1/1:0,10:10:30.02:275,30,0	1/1:4,15:19:39.01:357,39,0	1/1:2,10:12:27.01:247,27,0	0/0:2,0:14:28.41:0,28,144	0/0:14,0:14:39.10:0,39,441	1/1:2,14:16:42.02:384,42,0	0/0:0,0:8:14.20:0,14,72	0/0:9,0:9:24.07:0,24,277	0/0:20,0:20:57.17:0,57,656	0/0:8,0:8:24.07:0,24,277	1/1:1,10:11:24.01:220,24,0	1/1:1,21:22:60.03:549,60,0	1/1:0,5:5:15.01:137,15,0	0/0:1,0:12:31.43:0,31,167	0/0:26,0:26:75.21:0,75,857	0/0:31,0:31:81.24:0,81,934	0/0:23,0:23:63.17:0,63,716
chr10	42060017	.	AG	A	1119.09	PASS	AC=26;AF=0.722;AN=36;BaseQRankSum=1.844;DP=106;FS=0.000;HRun=6;HaplotypeScore=13.1342;InbreedingCoeff=0.6438;MQ=21.92;MQ0=41;MQRankSum=1.306;QD=16.70;ReadPosRankSum=1.177;VQSLOD=1.2941;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,3:3:9.02:97,9,0	./.	./.	./.	1/1:2,3:3:6.02:64,6,0	1/1:1,4:4:9.02:97,9,0	./.	1/1:5,6:7:18.05:193,18,0	./.	0/0:8,0:8:24.08:0,24,314	0/0:7,0:3:6.02:0,6,79	./.	1/1:0,4:4:12.03:128,12,0	1/1:0,1:1:3.01:32,3,0	0/0:2,0:1:3.01:0,3,39	./.	1/1:3,2:2:6.02:64,6,0	0/0:3,0:2:6.02:0,6,79	1/1:1,1:1:3.01:32,3,0	1/1:1,5:5:15.04:161,15,0	./.	1/1:1,4:4:12.03:129,12,0	1/1:3,2:2:6.02:64,6,0	./.	0/0:4,0:4:9.03:0,9,113	1/1:0,4:4:9.02:97,9,0	1/1:2,3:3:9.02:96,9,0	./.
chr10	42060108	.	AAG	A	1474.80	PASS	AB=0.984;AC=26;AF=0.464;AN=56;BaseQRankSum=3.169;DP=347;FS=6.393;HRun=0;HaplotypeScore=70.2480;InbreedingCoeff=0.0226;MQ=58.93;MQ0=32;MQRankSum=-5.341;QD=5.52;ReadPosRankSum=5.267;VQSLOD=1.3031;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:9:10.08:0,10,83	0/0:10,0:10:30.05:0,30,370	0/1:30,1:8:4.50:4,0,27	0/1:29,0:15:20.18:37,0,20	0/0:24,0:23:28.12:0,28,245	0/1:9,0:8:11.82:12,0,16	0/1:8,0:6:3.38:3,0,20	0/1:20,0:16:53.06:53,0,96	0/0:4,0:4:10.61:0,11,44	1/1:14,0:14:29.82:231,30,0	1/1:16,1:17:30.69:342,31,0	1/1:6,0:5:4.14:11,4,0	0/1:10,0:10:31.74:32,0,34	0/1:7,0:7:5.20:5,0,36	1/1:7,1:8:20.85:169,21,0	0/0:5,0:5:10.91:0,11,47	0/1:8,0:5:1.60:2,0,19	1/1:11,0:9:20.06:139,20,0	0/1:13,0:10:11.80:12,0,51	0/1:11,1:12:5.86:54,0,6	0/0:4,0:2:5.90:0,6,40	0/0:5,0:4:3.11:0,3,44	0/0:12,0:12:1.66:0,2,79	0/1:9,0:6:12.41:12,0,36	1/1:15,1:16:41.81:363,42,0	0/1:18,1:18:51.60:64,0,52	0/1:12,1:13:15.26:93,0,15	0/1:6,0:5:6.27:6,0,14
chr10	42060109	.	AG	A	1621.42	PASS	AB=0.961;AC=18;AF=0.321;AN=56;BaseQRankSum=-0.615;DP=344;FS=6.654;HRun=1;HaplotypeScore=65.7716;InbreedingCoeff=0.2805;MQ=59.26;MQ0=32;MQRankSum=-1.699;QD=7.91;ReadPosRankSum=0.007;VQSLOD=0.4854;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:10:22.33:0,22,127	0/0:10,0:10:30.04:0,30,301	0/1:29,3:8:15.43:20,0,15	0/1:28,1:15:14.73:28,0,15	0/1:23,2:24:44.88:45,0,150	0/0:9,0:8:5.70:0,6,32	0/0:8,0:6:10.47:0,10,46	0/1:20,1:17:5.71:6,0,151	0/1:4,0:4:2.60:4,0,3	1/1:9,3:12:29.89:279,30,0	1/1:7,9:16:42:456,42,0	0/0:6,0:5:7.66:0,8,21	0/1:10,0:10:11.54:12,0,42	0/0:7,0:7:4.83:0,5,50	1/1:3,5:8:20.98:221,21,0	0/0:5,0:5:1.58:0,2,6	0/0:7,0:4:5.48:0,5,31	1/1:7,4:9:20.77:216,21,0	0/0:13,0:10:22.95:0,23,123	0/0:11,0:11:0.47:0,0,63	0/0:4,0:2:5.92:0,6,42	0/0:5,0:4:6.87:0,7,51	0/0:12,0:12:17.74:0,18,108	0/1:9,0:6:9.16:9,0,39	1/1:5,10:15:42.02:478,42,0	0/0:19,0:18:23.37:0,23,162	0/1:12,1:13:24.40:24,0,64	0/0:6,0:5:10.29:0,10,50
chr10	42060134	.	CA	C	2241.87	PASS	AB=0.674;AC=41;AF=0.732;AN=56;BaseQRankSum=-0.246;DP=384;FS=2.839;HRun=13;HaplotypeScore=83.7541;InbreedingCoeff=0.5227;MQ=72.46;MQ0=5;MQRankSum=-2.166;QD=7.68;ReadPosRankSum=1.808;VQSLOD=3.0583;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,8:11:17.85:131,18,0	0/0:12,0:12:30.04:0,30,287	0/0:38,0:18:9.20:0,9,136	0/1:31,0:19:8.44:8,0,23	0/0:15,0:29:66.80:0,67,412	1/1:4,2:6:7.99:50,8,0	0/1:2,7:9:5.33:129,0,5	1/1:6,17:24:23.55:327,24,0	0/0:5,0:7:17.62:0,18,121	1/1:5,0:12:12.20:35,12,0	1/1:12,0:18:8.06:23,8,0	1/1:2,6:7:14.91:109,15,0	0/1:2,8:10:2.35:148,0,2	1/1:3,4:8:11.88:87,12,0	1/1:5,0:7:4.04:12,4,0	0/0:3,0:6:17.36:0,17,101	1/1:1,5:6:14.91:109,15,0	1/1:6,0:12:10.16:29,10,0	1/1:6,13:20:18.93:262,19,0	1/1:5,6:11:17.85:131,18,0	1/1:1,3:4:5.93:44,6,0	1/1:2,6:7:17.90:131,18,0	1/1:6,5:14:17.96:105,18,0	0/1:2,6:8:8.25:110,0,8	1/1:9,0:19:18.75:54,19,0	1/1:10,8:19:25.85:181,26,0	0/1:10,6:17:9.40:95,0,9	1/1:2,6:8:14.90:109,15,0
chr10	42060885	.	TA	T	1680.29	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=7.327;DP=518;FS=6.744;HRun=6;HaplotypeScore=53.2811;InbreedingCoeff=0.9937;MQ=84.90;MQ0=0;MQRankSum=-1.564;QD=25.85;ReadPosRankSum=1.331;VQSLOD=3.7341;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:75.23:0,75,971	0/0:7,0:7:21.07:0,21,276	0/0:18,0:18:42.12:0,42,530	0/0:15,0:15:24.16:0,24,422	0/0:29,0:29:84.27:0,84,1104	0/0:25,0:25:75.24:0,75,987	0/0:16,0:16:42.14:0,42,553	0/0:34,0:34:92.89:0,93,1161	0/0:21,0:21:63.20:0,63,829	1/1:2,12:14:36.09:387,36,0	1/1:2,14:16:45.11:477,45,0	0/0:14,0:14:39.13:0,39,513	0/0:21,0:21:54.16:0,54,694	0/0:19,0:19:51.17:0,51,671	1/1:1,15:16:45.11:484,45,0	0/0:12,0:12:27.09:0,27,355	0/0:21,0:21:57.15:0,57,718	1/1:1,7:8:14.56:217,15,0	0/0:28,0:28:75.24:0,75,987	0/0:23,0:23:66.21:0,66,868	0/0:15,0:15:45.13:0,45,576	0/0:18,0:18:54.13:0,54,654	0/0:21,0:21:63.18:0,63,797	0/0:21,0:21:57.17:0,57,736	1/1:1,10:11:27.07:290,27,0	0/0:10,0:10:30.10:0,30,395	0/0:29,0:29:87.25:0,87,1114	0/0:11,0:11:33.11:0,33,434
chr10	42062589	.	T	TACACAC	4165.65	PASS	AB=1.000;AC=47;AF=0.904;AN=52;BaseQRankSum=1.631;DP=562;FS=0.000;HRun=0;HaplotypeScore=182.7123;InbreedingCoeff=0.2668;MQ=60.26;MQ0=11;MQRankSum=-2.548;QD=8.77;ReadPosRankSum=-1.360;VQSLOD=2.5431;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:32,0:30:4.52:45,5,0	0/0:13,0:13:20.73:0,21,288	./.	./.	1/1:11,8:24:3.01:39,3,0	1/1:12,0:11:5.60:66,6,0	1/1:21,0:20:16.88:321,17,0	1/1:28,0:27:37.44:402,37,0	1/1:15,1:16:12.03:290,12,0	1/1:15,0:15:22.32:477,22,0	1/1:11,2:13:2.85:25,3,0	1/1:20,0:19:12.01:165,12,0	1/1:14,0:15:23.53:374,24,0	1/1:19,0:20:14.94:190,15,0	1/1:12,0:13:11.90:200,12,0	1/1:11,9:26:25.91:505,26,0	1/1:25,0:30:5.11:264,5,0	1/1:14,0:12:19.53:237,20,0	1/1:13,0:11:8.98:106,9,0	1/1:22,0:22:2.49:24,2,0	1/1:24,0:22:6.03:43,6,0	1/1:28,0:25:10.58:102,11,0	0/0:22,0:20:0.46:0,0,1	1/1:28,0:28:3.01:31,3,0	1/1:16,1:15:2.62:47,3,0	1/1:20,0:19:15.89:180,16,0	1/1:16,0:14:1.78:23,2,0	0/1:6,0:5:11.55:12,0,31
chr10	42062626	.	T	TCA	3886.84	PASS	AB=0.685;AC=40;AF=0.714;AN=56;BaseQRankSum=1.861;DP=673;FS=6.318;HRun=0;HaplotypeScore=138.9234;InbreedingCoeff=0.5521;MQ=59.24;MQ0=16;MQRankSum=-3.127;QD=7.40;ReadPosRankSum=3.679;VQSLOD=2.9525;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:17,22:37:0:0,0,0	0/0:12,0:12:17.86:0,18,227	0/0:41,0:16:35.73:0,36,385	0/0:49,0:23:50.45:0,50,583	0/0:25,0:25:36.99:0,37,470	1/1:7,13:20:6.02:67,6,0	1/1:9,17:25:15.03:191,15,0	1/1:31,0:30:12.58:349,13,0	0/1:20,0:20:15.03:15,0,353	1/1:7,12:18:34.34:501,34,0	0/1:5,14:19:0:0,0,0	1/1:3,20:22:15.01:187,15,0	1/1:7,14:21:17.93:282,18,0	1/1:6,16:22:8.81:124,9,0	1/1:4,9:12:6.02:98,6,0	0/0:21,0:21:24.75:0,25,254	1/1:9,22:32:23.44:433,23,0	0/1:9,6:14:30.71:45,0,31	1/1:5,10:16:33.11:495,33,0	1/1:13,12:26:3:40,3,0	1/1:14,19:29:0.47:1,0,0	1/1:15,12:27:2.88:50,3,0	0/1:7,15:20:0.33:0,0,0	0/1:8,20:28:0.02:0,0,0	1/1:7,8:14:5.05:56,5,0	1/1:13,19:29:52.04:696,52,0	1/1:8,7:13:3.01:37,3,0	1/1:8,0:8:15.05:221,15,0
chr10	42062789	.	TGAGA	T	1148.64	PASS	AB=0.852;AC=20;AF=0.385;AN=52;BaseQRankSum=1.277;DP=477;FS=0.000;HRun=0;HaplotypeScore=95.1191;InbreedingCoeff=0.3883;MQ=60.96;MQ0=4;MQRankSum=2.501;QD=5.02;ReadPosRankSum=3.242;VQSLOD=1.7866;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:13,12:25:15.05:234,15,0	0/0:5,0:5:5.75:0,6,83	./.	./.	0/1:19,1:27:22.79:23,0,298	0/1:8,1:14:25.68:35,0,26	0/0:8,0:14:13.72:0,14,61	0/0:29,0:29:18.53:0,19,381	0/1:8,2:15:31.91:77,0,32	0/0:24,0:24:25.90:0,26,483	0/1:14,0:14:0:0,0,0	1/1:5,10:16:27.08:395,27,0	0/1:10,0:12:13.15:13,0,205	1/1:11,7:19:12.04:187,12,0	0/0:8,0:8:2.98:0,3,64	0/0:21,0:21:26.83:0,27,527	1/1:16,0:19:3.47:29,3,0	0/0:11,0:10:10.28:0,10,189	0/0:9,0:9:12.51:0,13,269	0/0:17,0:22:8.93:0,9,67	0/0:7,0:7:6.02:0,6,127	0/1:18,1:20:41.90:42,0,541	1/1:8,2:11:6.02:94,6,0	1/1:5,7:13:12.04:187,12,0	1/1:22,0:23:0.89:2,1,0	0/0:15,0:24:45.15:0,45,892	0/0:12,0:22:20.87:0,21,235	0/0:5,0:5:7.77:0,8,47
chr10	42063373	.	G	GA	5551.60	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-3.383;DP=582;FS=1.212;HRun=4;HaplotypeScore=102.4633;InbreedingCoeff=0.9990;MQ=59.29;MQ0=4;MQRankSum=-3.382;QD=29.07;ReadPosRankSum=1.698;VQSLOD=4.4037;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,11:14:27.38:328,27,0	0/0:7,0:7:21.04:0,21,229	0/0:29,0:18:41.78:0,42,484	0/0:32,0:23:45.82:0,46,570	0/0:20,0:20:48.12:0,48,541	1/1:7,18:25:61.33:761,61,0	1/1:2,18:20:48.04:590,48,0	0/0:33,0:33:87.25:0,87,986	0/0:23,0:23:45.13:0,45,510	0/0:18,0:18:48.13:0,48,545	0/0:14,0:14:35.94:0,36,399	1/1:1,16:17:45.06:573,45,0	1/1:8,22:30:66.15:862,66,0	1/1:2,19:21:51.08:655,51,0	0/0:26,0:26:72.19:0,72,801	0/0:21,0:21:45.13:0,45,510	1/1:1,13:14:39.09:508,39,0	0/0:16,0:16:39.07:0,39,428	0/0:23,0:23:54.12:0,54,588	0/0:22,0:22:63.15:0,63,702	0/0:32,0:29:69.15:0,69,782	1/1:3,13:16:36.08:471,36,0	1/1:0,15:15:37.32:474,37,0	1/1:3,16:18:28.46:329,28,0	0/0:21,0:21:51.14:0,51,579	0/0:22,0:22:57.15:0,57,637	0/0:19,0:17:54.14:0,54,602	0/0:13,0:13:30.09:0,30,340
chr10	42063382	.	CTGTG	C	2238.58	PASS	AB=0.786;AC=24;AF=0.429;AN=56;BaseQRankSum=1.541;DP=617;FS=9.858;HRun=0;HaplotypeScore=145.3733;InbreedingCoeff=0.4320;MQ=57.34;MQ0=12;MQRankSum=-3.050;QD=6.27;ReadPosRankSum=0.849;VQSLOD=2.2937;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:18:14.76:0,15,241	0/0:8,0:8:12.04:0,12,285	0/0:27,0:16:0:0,0,0	0/0:28,0:18:0:0,0,0	1/1:11,7:18:18.52:247,19,0	1/1:14,10:25:14.80:231,15,0	0/1:15,4:19:13.86:192,0,14	0/0:35,0:33:12:0,12,109	0/1:13,9:22:0.47:130,0,0	0/0:17,0:24:41.81:0,42,644	0/0:11,0:14:17.80:0,18,319	1/1:12,4:16:8.94:87,9,0	1/1:18,9:28:26.34:437,26,0	0/1:20,3:23:1.71:167,0,2	0/0:22,0:25:45.10:0,45,725	1/1:11,7:19:12.04:189,12,0	0/1:13,2:16:1.57:99,0,2	0/0:14,0:19:33.98:0,34,428	0/1:17,1:23:37.93:150,0,38	0/1:15,0:22:8.03:8,0,62	0/1:31,1:39:18.96:19,0,107	1/1:10,3:15:14.99:160,15,0	1/1:14,5:19:11.89:152,12,0	1/1:17,3:20:8.94:110,9,0	0/0:12,0:23:24.08:0,24,447	0/1:16,1:26:46.78:47,0,129	0/0:13,0:20:39.74:0,40,206	0/0:9,0:14:8.23:0,8,37
chr10	42063819	.	CTT	C	14964.75	PASS	AB=0.514;AC=29;AF=0.518;AN=56;BaseQRankSum=15.203;DP=621;FS=6.180;HRun=3;HaplotypeScore=80.0771;InbreedingCoeff=0.9491;MQ=72.86;MQ0=0;MQRankSum=-4.236;QD=40.67;ReadPosRankSum=3.120;VQSLOD=4.3948;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:54.19:0,54,1033	0/0:11,0:11:33.10:0,33,576	0/0:21,0:21:57.55:0,58,1021	0/0:34,0:34:73.28:0,73,1703	0/0:24,0:24:72.22:0,72,1292	1/1:0,37:37:99:1561,102,0	1/1:1,13:14:36.12:551,36,0	1/1:2,39:41:99:1659,114,0	0/0:24,0:24:72.25:0,72,1390	0/0:25,0:25:75.25:0,75,1418	0/0:11,0:11:33.11:0,33,631	1/1:0,19:19:57.19:873,57,0	1/1:2,24:26:60.20:909,60,0	1/1:0,21:21:57.19:872,57,0	0/0:10,0:10:27.09:0,27,522	0/0:19,0:19:57.20:0,57,1101	0/0:14,0:14:42.13:0,42,779	0/0:18,0:18:54.14:0,54,1004	1/1:0,17:17:48.15:710,48,0	1/1:0,30:30:78.26:1194,78,0	1/1:0,35:35:99:1515,99,0	1/1:1,19:20:54.18:827,54,0	1/1:0,28:28:72.24:1102,72,0	1/1:0,16:16:45.15:687,45,0	0/0:23,0:23:69.23:0,69,1301	0/1:1,17:18:3.84:669,0,4	1/1:1,33:34:87.30:1331,87,0	1/1:1,11:12:33.11:505,33,0
chr10	42063955	.	A	ATTCT	37341.85	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-7.885;DP=653;FS=1.387;HRun=0;HaplotypeScore=82.6762;InbreedingCoeff=0.9923;MQ=77.71;MQ0=2;MQRankSum=-7.721;QD=61.52;ReadPosRankSum=4.859;VQSLOD=6.5475;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,18:20:45.15:1193,45,0	0/0:12,0:12:30.10:0,30,560	0/0:14,0:14:33.11:0,33,592	0/0:20,0:20:42.14:0,42,707	1/1:2,35:38:96.20:2378,96,0	1/1:0,32:33:78.19:2080,78,0	1/1:3,10:14:21.07:559,21,0	1/1:8,26:36:96.32:2323,96,0	1/1:1,27:29:72.20:1859,72,0	1/1:1,21:21:63.20:1537,63,0	1/1:1,31:32:72.25:1919,72,0	1/1:2,17:21:48.12:1220,48,0	1/1:0,18:20:36.12:959,36,0	1/1:3,19:22:57.15:1459,57,0	1/1:0,14:15:36.12:954,36,0	1/1:1,18:21:51.09:1240,51,0	1/1:2,12:15:30.07:736,30,0	1/1:0,12:13:33.11:842,33,0	1/1:3,14:18:42.13:1028,42,0	1/1:2,23:28:69.19:1779,69,0	1/1:1,9:10:15.05:400,15,0	1/1:2,21:24:63.17:1580,63,0	1/1:2,36:39:96.24:2433,96,0	1/1:1,17:19:45.11:1140,45,0	1/1:2,22:24:57.20:1514,57,0	1/1:3,31:34:96.33:2517,96,0	1/1:1,35:38:84.29:2240,84,0	1/1:3,18:20:57.19:1452,57,0
chr10	42064721	.	ACC	A	4302.45	PASS	AB=0.587;AC=33;AF=0.589;AN=56;BaseQRankSum=-2.430;DP=495;FS=6.808;HRun=12;HaplotypeScore=87.0862;InbreedingCoeff=0.5058;MQ=82.78;MQ0=1;MQRankSum=-2.282;QD=13.12;ReadPosRankSum=5.933;VQSLOD=3.2961;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,22:26:45.09:458,45,0	0/0:10,0:10:21.05:0,21,273	0/0:46,0:33:47.93:0,48,515	0/0:19,0:16:16.58:0,17,178	1/1:1,0:19:44.34:213,44,0	1/1:4,13:19:47.30:432,47,0	1/1:5,10:15:27:259,27,0	0/0:13,0:25:26.63:0,27,127	1/1:0,0:17:35.68:154,36,0	0/0:2,0:15:21.05:0,21,86	0/1:2,2:12:29.49:44,0,29	1/1:1,11:12:33.06:336,33,0	1/1:5,16:21:35.96:351,36,0	1/1:2,18:21:47.90:471,48,0	0/1:3,0:12:6.04:6,0,41	1/1:0,0:23:57.64:250,58,0	1/1:2,0:24:54.88:238,55,0	0/0:3,0:14:21.93:0,22,116	0/1:8,2:13:45.27:45,0,48	0/1:3,1:10:16.41:16,0,24	0/1:3,1:11:38.74:70,0,39	1/1:7,10:17:4.93:237,5,0	1/1:1,18:19:47.68:484,48,0	1/1:2,10:15:20.24:229,20,0	0/0:4,1:18:22.46:0,22,78	0/1:4,0:12:1.87:2,0,53	0/0:3,1:18:5.44:0,5,119	0/1:0,1:10:7.55:8,0,47
chr10	42065982	.	TGAGAGA	T	981.09	PASS	AC=14;AF=0.269;AN=52;BaseQRankSum=-0.101;DP=729;FS=7.540;HRun=0;HaplotypeScore=154.3720;InbreedingCoeff=0.7051;MQ=50.59;MQ0=38;MQRankSum=-1.344;QD=6.96;ReadPosRankSum=2.746;VQSLOD=1.8544;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:38:36.59:0,37,907	0/0:9,0:15:3.35:0,3,45	./.	./.	0/0:24,0:24:11.07:0,11,124	0/0:31,0:30:9.03:0,9,160	0/0:19,0:15:11.98:0,12,176	0/0:30,0:29:27.56:0,28,592	0/0:20,0:22:16.77:0,17,319	1/1:20,6:30:36.07:571,36,0	1/1:12,8:22:2.80:16,3,0	0/0:21,0:21:23.60:0,24,443	0/0:16,0:16:6.02:0,6,158	0/0:27,0:27:3.01:0,3,76	1/1:10,4:15:11.77:174,12,0	0/0:27,0:28:19.67:0,20,247	1/1:7,0:12:9.02:109,9,0	1/1:12,0:12:9.03:175,9,0	0/0:31,0:30:30.10:0,30,519	0/0:42,0:42:18.02:0,18,295	0/0:21,0:20:5.74:0,6,122	0/0:32,0:31:11.78:0,12,114	0/0:21,0:21:8.69:0,9,108	1/1:27,0:27:0.26:1,0,0	1/1:15,7:23:6.01:91,6,0	0/0:25,0:25:22.62:0,23,407	0/0:9,0:9:9.03:0,9,154	0/0:9,0:10:6.02:0,6,159
chr10	42065987	.	G	GAGAGAGAGAGAA	3626.42	PASS	AB=1.000;AC=24;AF=0.429;AN=56;BaseQRankSum=1.129;DP=705;FS=0.000;HRun=0;HaplotypeScore=193.8500;InbreedingCoeff=0.3684;MQ=50.47;MQ0=35;MQRankSum=-0.669;QD=8.26;ReadPosRankSum=-2.631;VQSLOD=2.1532;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:40,0:39:43.43:43,0,81	0/0:14,0:14:33:0,33,429	0/0:42,0:6:2.99:0,3,24	0/1:59,0:6:1.03:1,0,8	0/1:26,0:26:0.58:93,0,1	1/1:9,20:30:9:253,9,0	1/1:18,0:14:15.59:287,16,0	0/1:30,0:29:99:328,0,236	0/1:22,0:22:11.85:303,0,12	0/0:30,0:29:72.09:0,72,1062	0/0:22,0:22:29.91:0,30,241	1/1:20,0:20:26.83:563,27,0	1/1:4,12:19:6.02:267,6,0	1/1:6,20:30:3.01:179,3,0	0/0:15,0:15:24.01:0,24,238	1/1:27,0:27:6.91:217,7,0	0/0:11,0:11:17.86:0,18,251	0/0:14,0:14:21.87:0,22,274	0/1:27,0:26:99:269,0,296	0/0:40,0:40:44.97:0,45,281	0/0:20,0:19:14.75:0,15,103	1/1:7,23:34:14.98:122,15,0	1/1:21,0:21:31.26:281,31,0	0/0:10,16:26:1.93:0,2,10	0/0:23,0:23:44.91:0,45,389	0/1:24,0:24:99:310,0,141	0/1:10,0:10:30.53:110,0,31	0/0:9,0:8:11.47:0,11,76
chr10	42065989	.	G	GAGAGAGAGAGAA	4888.92	PASS	AB=0.869;AC=27;AF=0.482;AN=56;BaseQRankSum=-5.577;DP=710;FS=4.099;HRun=0;HaplotypeScore=194.3728;InbreedingCoeff=0.4856;MQ=50.89;MQ0=32;MQRankSum=-2.556;QD=10.61;ReadPosRankSum=-4.127;VQSLOD=2.9686;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:39:40.31:0,40,324	0/0:15,0:15:33:0,33,427	0/0:34,0:6:2.99:0,3,23	0/1:55,0:5:0.86:1,0,15	1/1:5,0:32:3.88:63,4,0	0/1:30,0:29:4.66:211,0,5	0/1:17,0:13:13.27:13,0,95	1/1:31,0:30:43.78:798,44,0	0/1:7,0:25:1.03:311,0,1	0/0:30,0:29:69.07:0,69,1032	0/0:22,0:22:29.93:0,30,245	0/1:18,0:20:64.05:358,0,64	1/1:16,0:17:6.02:228,6,0	1/1:26,0:26:3.01:143,3,0	0/0:16,0:16:24.01:0,24,239	1/1:9,0:30:18.77:293,19,0	0/0:11,0:11:17.85:0,18,248	0/0:11,0:11:23.97:0,24,330	1/1:6,20:29:50.79:795,51,0	1/1:39,1:40:15.99:267,16,0	1/1:21,0:20:20.51:139,21,0	0/1:35,0:35:23:23,0,46	0/0:22,0:22:15.66:0,16,114	0/0:25,0:25:5.04:0,5,42	0/0:23,0:23:44.91:0,45,392	1/1:7,14:27:47.49:1004,47,0	0/1:5,5:13:8.57:127,0,9	1/1:11,0:10:15.40:116,15,0
chr10	42065991	.	G	GAGAGAGAGAA	3751.27	PASS	AB=0.960;AC=19;AF=0.339;AN=56;BaseQRankSum=-5.191;DP=691;FS=1.478;HRun=0;HaplotypeScore=180.9370;InbreedingCoeff=0.0427;MQ=49.88;MQ0=32;MQRankSum=-2.905;QD=9.77;ReadPosRankSum=0.429;VQSLOD=2.5992;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:38:13.87:0,14,151	0/0:15,0:15:36:0,36,428	0/0:29,0:4:2.99:0,3,23	0/1:53,0:5:0.86:1,0,15	0/0:31,0:31:0.42:0,0,105	0/1:28,0:27:25.10:159,0,25	0/1:17,0:13:12.05:12,0,95	0/1:31,0:30:31.68:622,0,32	0/1:23,0:23:24.21:327,0,24	0/0:31,0:30:78.04:0,78,1053	0/0:23,0:23:32.92:0,33,266	0/1:21,0:21:75.09:205,0,75	1/1:17,0:17:6.02:197,6,0	1/1:25,0:25:3.01:105,3,0	0/0:14,0:14:24:0,24,239	0/1:29,0:29:70.90:220,0,71	0/0:10,0:10:17.85:0,18,221	0/0:11,0:11:26.96:0,27,332	1/1:28,0:27:18.68:603,19,0	0/1:15,24:39:99:145,0,110	0/1:20,0:20:11.85:102,0,12	0/0:34,0:33:19.84:0,20,128	0/0:22,0:22:22.14:0,22,123	0/0:24,0:24:5.24:0,5,44	0/0:23,0:23:47.91:0,48,417	1/1:28,0:28:28.05:851,28,0	0/1:13,0:13:44.95:104,0,45	0/1:10,0:9:21.07:98,0,21
chr10	42065995	.	G	GAGAA	1930.97	PASS	AB=0.971;AC=14;AF=0.250;AN=56;BaseQRankSum=2.088;DP=654;FS=0.000;HRun=0;HaplotypeScore=134.6873;InbreedingCoeff=-0.3355;MQ=48.47;MQ0=28;MQRankSum=-0.808;QD=5.76;ReadPosRankSum=1.372;VQSLOD=2.5808;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:11,21:36:9.72:859,0,10	0/0:16,0:16:38.95:0,39,348	0/0:21,0:3:2.99:0,3,24	0/0:49,0:7:4.96:0,5,57	0/1:31,0:31:93.61:94,0,107	0/1:24,0:23:35.87:70,0,36	0/1:17,0:13:25.97:210,0,26	0/0:34,0:32:18.24:0,18,439	0/1:23,0:23:85.24:132,0,85	0/0:30,0:29:84.02:0,84,818	0/0:24,0:24:38.87:0,39,314	0/1:21,0:21:42.23:165,0,42	0/1:16,0:16:13.95:103,0,14	0/1:24,0:24:18.91:50,0,19	0/0:13,0:13:24:0,24,219	0/1:28,0:28:68.36:68,0,98	0/0:11,0:11:17.85:0,18,140	0/0:11,0:11:29.96:0,30,273	0/1:24,0:23:64.98:65,0,197	0/0:32,0:32:52.74:0,53,358	0/0:20,0:19:20.94:0,21,179	0/1:30,0:29:21.25:21,0,77	0/1:22,0:22:46.32:153,0,46	0/0:24,0:24:7.48:0,7,57	0/0:24,0:24:47.90:0,48,402	0/1:24,0:24:52.51:53,0,241	0/1:14,0:14:43.44:43,0,66	0/0:10,0:9:20.74:0,21,145
chr10	42067442	.	C	CT	4876.87	PASS	AB=0.913;AC=19;AF=0.339;AN=56;BaseQRankSum=-12.941;DP=575;FS=1.166;HRun=8;HaplotypeScore=54.5142;InbreedingCoeff=0.9135;MQ=87.44;MQ0=0;MQRankSum=-3.324;QD=24.63;ReadPosRankSum=-0.229;VQSLOD=5.2862;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:56.99:0,57,510	0/0:8,0:8:21.01:0,21,192	0/0:27,0:27:47.88:0,48,417	0/0:19,0:20:9.96:0,10,296	1/1:4,29:33:90.12:989,90,0	0/0:33,0:33:87.01:0,87,790	0/0:16,0:16:35.98:0,36,320	0/0:21,0:21:60.01:0,60,538	1/1:3,15:18:42.12:485,42,0	1/1:3,16:19:23.62:487,24,0	1/1:3,19:22:54.12:608,54,0	0/0:17,0:17:48.02:0,48,439	0/0:18,0:18:47.99:0,48,429	0/0:15,0:15:42.02:0,42,384	1/1:0,16:16:42.12:485,42,0	1/1:1,16:17:45.13:519,45,0	1/1:3,18:21:45.13:519,45,0	1/1:2,6:8:15.04:173,15,0	0/1:19,2:21:12.24:12,0,400	0/0:36,0:36:93.01:0,93,842	0/0:14,0:14:39.02:0,39,357	0/0:19,0:19:57.03:0,57,521	0/0:32,0:32:92.18:0,92,849	0/0:19,0:19:54.03:0,54,494	1/1:3,20:23:33.17:599,33,0	0/0:31,0:31:87.04:0,87,796	0/0:22,0:22:60.03:0,60,549	0/0:7,0:7:21.01:0,21,192
chr10	42067887	.	A	AT	1855.82	PASS	AB=0.920;AC=12;AF=0.214;AN=56;BaseQRankSum=-9.684;DP=616;FS=12.628;HRun=10;HaplotypeScore=74.1915;InbreedingCoeff=0.7860;MQ=70.61;MQ0=0;MQRankSum=1.494;QD=14.28;ReadPosRankSum=0.629;VQSLOD=2.4757;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:45:99:0,122,987	0/0:12,0:12:23.94:0,24,197	0/0:16,0:17:31.25:0,31,217	0/0:11,0:9:14.47:0,14,107	0/0:33,0:33:80.87:0,81,662	0/0:24,0:24:65.91:0,66,542	0/0:16,0:17:40.97:0,41,326	0/0:27,0:27:44.84:0,45,364	0/0:16,0:16:27.99:0,28,350	1/1:7,19:26:38.51:613,39,0	1/1:0,15:15:42.07:435,42,0	0/0:13,0:13:32.95:0,33,271	0/0:24,0:24:62.87:0,63,512	0/0:23,0:23:53.92:0,54,443	1/1:3,19:21:32.50:551,32,0	0/0:21,0:21:53.88:0,54,437	0/0:22,0:22:53.92:0,54,443	1/1:0,5:5:12.03:128,12,0	0/1:20,2:22:16.05:16,0,297	0/0:39,0:40:91.88:0,92,745	0/0:24,0:24:59.92:0,60,493	0/0:31,0:31:75.77:0,76,617	0/0:30,0:30:77.90:0,78,640	0/0:26,0:26:59.28:0,59,472	1/1:2,14:16:8.40:283,8,0	0/1:22,2:24:1.10:1,0,397	0/0:28,0:28:68.83:0,69,561	0/0:2,0:2:5.99:0,6,49
chr10	42068146	.	CAGCTATCTATCTATCT	C	39245.85	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=8.412;DP=504;FS=0.000;HRun=0;HaplotypeScore=230.1528;InbreedingCoeff=0.8755;MQ=81.03;MQ0=0;MQRankSum=-11.484;QD=89.40;ReadPosRankSum=6.932;VQSLOD=3.7115;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,24:27:45.07:1899,45,0	0/0:11,0:11:33.11:0,33,2261	0/0:30,0:31:86.57:0,87,4804	0/0:23,0:23:43:0,43,2190	1/1:0,23:23:42.13:2005,42,0	1/1:0,24:24:63.22:3013,63,0	1/1:1,17:18:27.09:1292,27,0	1/1:2,17:19:51.16:1688,51,0	1/1:0,29:29:51.18:2443,51,0	1/1:0,6:6:15.05:614,15,0	1/1:0,8:8:18.40:492,18,0	1/1:0,25:25:57.20:2730,57,0	1/1:2,31:34:72.25:3446,72,0	1/1:1,18:19:33.11:1581,33,0	1/1:0,10:10:30.10:1437,30,0	1/1:2,19:21:24.08:1149,24,0	1/1:0,22:22:21.07:1006,21,0	1/1:1,0:1:3.01:67,3,0	1/1:0,11:11:33.09:1040,33,0	1/1:0,20:20:57.16:2390,57,0	1/1:0,14:14:15.05:718,15,0	1/1:1,25:26:51.18:2443,51,0	1/1:2,21:23:36.12:1723,36,0	1/1:1,13:14:27.05:1162,27,0	1/1:0,2:2:6.02:287,6,0	1/1:0,15:15:42.14:1759,42,0	1/1:1,24:25:51.18:2435,51,0	1/1:0,3:3:9.03:426,9,0
chr10	42070050	.	GT	G	14989.63	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=14.913;DP=721;FS=2.262;HRun=1;HaplotypeScore=71.9897;InbreedingCoeff=0.9983;MQ=88.89;MQ0=0;MQRankSum=-2.430;QD=38.93;ReadPosRankSum=1.138;VQSLOD=5.5422;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:50:99:0,150,2351	0/0:6,0:6:18.06:0,18,288	0/0:25,0:25:75.19:0,75,1112	0/0:26,0:26:69.09:0,69,1010	0/0:28,0:28:84.29:0,84,1342	1/1:0,27:27:78.26:1090,78,0	1/1:0,28:28:75.25:1049,75,0	1/1:0,42:42:99:1675,126,0	0/0:22,0:22:66.19:0,66,1007	0/0:35,0:35:99:0,105,1651	0/0:14,0:14:42.13:0,42,647	1/1:0,25:25:72.24:1005,72,0	1/1:0,12:13:35.85:469,36,0	1/1:0,32:32:93.31:1300,93,0	0/0:22,0:22:66.19:0,66,991	0/0:32,0:31:96.31:0,96,1510	0/0:34,0:34:99:0,102,1605	0/0:24,0:24:72.25:0,72,1150	1/1:1,19:20:55.05:725,55,0	1/1:0,28:28:81.24:1111,81,0	1/1:0,28:28:72.24:1007,72,0	1/1:0,20:20:60.20:839,60,0	1/1:0,25:25:66.22:922,66,0	1/1:0,32:32:93.31:1300,93,0	0/0:17,0:17:51.16:0,51,792	1/1:1,25:26:52.24:990,52,0	1/1:1,31:32:87.29:1215,87,0	1/1:0,7:7:21.07:293,21,0
chr10	42071126	.	TC	T	5040.15	PASS	AB=0.917;AC=42;AF=0.750;AN=56;BaseQRankSum=1.466;DP=322;FS=18.006;HRun=1;HaplotypeScore=65.5903;InbreedingCoeff=0.7646;MQ=68.11;MQ0=1;MQRankSum=2.304;QD=20.83;ReadPosRankSum=1.132;VQSLOD=3.6927;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:45.12:0,45,631	0/0:9,0:9:27.06:0,27,363	0/1:4,1:5:6.38:6,0,83	0/0:7,0:5:12.03:0,12,157	0/0:24,0:24:56.78:0,57,225	1/1:16,0:15:37.99:188,38,0	1/1:8,0:8:13.37:68,13,0	1/1:26,0:26:67.53:507,68,0	0/0:7,0:7:17.22:0,17,63	1/1:4,8:12:36.12:488,36,0	1/1:0,11:11:33.11:458,33,0	1/1:7,0:7:15.53:78,16,0	1/1:4,0:4:11.30:78,11,0	1/1:11,0:11:26.78:143,27,0	1/1:1,6:7:21.06:276,21,0	0/1:10,0:10:23.35:38,0,23	0/0:18,0:18:54.17:0,54,763	1/1:2,16:18:48.14:648,48,0	1/1:12,0:12:31.80:196,32,0	1/1:22,0:22:56.03:292,56,0	1/1:3,0:3:8.27:37,8,0	1/1:2,0:2:5.84:41,6,0	1/1:6,0:6:11.96:47,12,0	1/1:5,0:5:9.19:73,9,0	1/1:2,16:18:54.17:723,54,0	1/1:16,1:17:49.33:377,49,0	1/1:12,1:13:21.62:165,22,0	1/1:9,0:9:19.73:112,20,0
chr10	42071191	.	AC	A	3909.28	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-3.328;DP=428;FS=14.073;HRun=5;HaplotypeScore=96.1385;InbreedingCoeff=0.9645;MQ=60.10;MQ0=7;MQRankSum=1.031;QD=29.62;ReadPosRankSum=1.343;VQSLOD=2.6272;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:81.10:0,81,1071	0/0:11,0:11:33.08:0,33,429	0/0:17,0:7:21.07:0,21,287	0/0:12,0:6:3.11:0,3,152	1/1:3,22:25:60.17:680,60,0	0/0:24,0:23:66.20:0,66,883	0/0:13,0:13:33.09:0,33,434	0/0:23,0:23:48.10:0,48,599	1/1:0,8:8:24.07:272,24,0	1/1:0,23:23:69.20:782,69,0	1/1:3,14:17:42.12:475,42,0	0/0:14,0:14:39.13:0,39,533	0/0:13,0:13:36.11:0,36,476	0/0:18,0:18:54.18:0,54,736	1/1:0,11:11:33.09:374,33,0	1/1:0,19:19:51.14:579,51,0	0/0:15,0:15:45.15:0,45,613	1/1:4,10:14:30.09:340,30,0	0/0:16,0:14:42.09:0,42,533	0/0:10,0:10:30.06:0,30,389	0/0:8,0:8:24.08:0,24,328	0/0:11,0:11:30.10:0,30,410	0/0:15,0:15:45.15:0,45,614	0/0:9,0:9:24.08:0,24,328	1/1:2,13:15:36.10:406,36,0	0/0:19,0:19:57.19:0,57,779	0/0:17,0:17:39.13:0,39,533	0/0:4,0:4:12.04:0,12,161
chr10	42071279	.	CAAAA	C	3965.34	PASS	AB=0.634;AC=28;AF=0.500;AN=56;BaseQRankSum=4.787;DP=459;FS=12.193;HRun=13;HaplotypeScore=109.8474;InbreedingCoeff=0.7181;MQ=74.91;MQ0=0;MQRankSum=-1.601;QD=15.67;ReadPosRankSum=4.122;VQSLOD=0.3703;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:28:66.18:0,66,1472	0/0:7,0:8:24.08:0,24,537	0/0:12,0:14:8.70:0,9,352	0/1:12,0:11:7.44:7,0,165	0/0:17,0:19:51.11:0,51,989	1/1:2,20:22:42.11:614,42,0	1/1:0,16:16:45.13:658,45,0	0/1:6,0:28:3.06:29,0,3	0/0:12,0:12:33.11:0,33,723	0/0:8,0:18:44.93:0,45,536	0/0:4,0:19:48.03:0,48,550	1/1:4,13:17:33.07:483,33,0	1/1:2,9:11:21.04:307,21,0	1/1:2,14:16:39.07:546,39,0	0/0:4,0:12:23.99:0,24,278	0/0:11,0:11:21.07:0,21,485	0/0:2,0:25:62.52:0,63,412	0/0:5,0:23:56.91:0,57,662	0/1:2,0:18:6.94:7,0,29	1/1:1,0:20:3.60:34,4,0	0/1:1,1:13:6.34:56,0,6	1/1:2,7:9:21.05:307,21,0	1/1:2,10:12:21.01:307,21,0	1/1:1,15:16:30.07:439,30,0	0/0:5,0:17:47.95:0,48,557	1/1:4,2:16:18.44:120,18,0	1/1:3,0:20:14.92:40,15,0	1/1:2,0:6:3.73:10,4,0
chr10	42071873	.	CA	C	5441.16	PASS	AB=0.904;AC=49;AF=0.875;AN=56;BaseQRankSum=9.381;DP=676;FS=0.000;HRun=1;HaplotypeScore=392.8737;InbreedingCoeff=0.0275;MQ=50.70;MQ0=0;MQRankSum=-0.146;QD=8.11;ReadPosRankSum=9.403;VQSLOD=1.3409;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:2,24:26:16.92:30,0,17	1/1:17,0:17:9.88:119,10,0	1/1:3,0:2:2.99:23,3,0	0/0:5,0:2:3:0,3,27	1/1:42,0:42:56.56:294,57,0	1/1:18,0:18:11:123,11,0	0/1:15,0:15:20.77:83,0,21	0/1:35,0:35:99:323,0,104	1/1:33,0:33:59.54:320,60,0	1/1:34,0:34:70.43:436,70,0	1/1:27,0:27:44.77:224,45,0	1/1:35,0:35:14.78:205,15,0	1/1:37,0:37:54.61:344,55,0	1/1:22,0:22:20.29:173,20,0	1/1:39,0:39:59.21:321,59,0	1/1:34,0:34:56.83:293,57,0	1/1:10,0:10:2.79:98,3,0	1/1:5,0:5:5.87:35,6,0	0/1:21,0:20:27.01:151,0,27	1/1:36,0:36:35.92:236,36,0	1/1:24,0:24:8.29:112,8,0	0/1:25,0:25:20.93:143,0,21	1/1:29,0:29:37.17:263,37,0	1/1:13,0:13:13.28:62,13,0	1/1:19,0:19:36.76:196,37,0	1/1:33,0:33:84.11:406,84,0	1/1:35,0:35:60.54:390,61,0	1/1:4,0:4:8.36:40,8,0
chr10	42072774	.	CTA	C	1479.75	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=5.549;DP=428;FS=13.563;HRun=0;HaplotypeScore=82.4471;InbreedingCoeff=0.9741;MQ=90.53;MQ0=1;MQRankSum=-4.753;QD=39.99;ReadPosRankSum=0.664;VQSLOD=4.3937;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:57.16:0,57,1063	0/0:9,0:9:27.09:0,27,522	0/0:24,0:24:68.58:0,69,1179	0/0:11,0:11:33.11:0,33,596	1/1:2,14:16:45.15:687,45,0	0/0:19,0:19:54.19:0,54,1043	0/0:8,0:8:24.08:0,24,463	0/0:43,0:42:99:0,126,2367	1/1:0,9:9:27.04:386,27,0	0/0:19,0:19:57.20:0,57,1101	0/0:16,0:16:42.13:0,42,760	0/0:8,0:8:21.07:0,21,397	0/0:10,0:10:27.09:0,27,521	0/0:13,0:13:39.13:0,39,753	0/0:13,0:13:30.10:0,30,579	1/1:0,12:12:36.12:549,36,0	0/0:20,0:20:60.21:0,60,1158	0/0:14,0:14:39.13:0,39,740	0/0:15,0:15:42.14:0,42,812	0/0:25,0:25:72.25:0,72,1390	0/0:13,0:13:36.10:0,36,660	0/0:17,0:17:48.16:0,48,926	0/0:5,0:4:12.04:0,12,231	0/0:4,0:4:12.04:0,12,232	0/0:9,0:9:24.08:0,24,455	0/0:15,0:15:45.10:0,45,830	0/0:23,0:23:60.21:0,60,1150	0/0:19,0:19:54.19:0,54,1027
chr10	42072812	.	G	GAC	16332	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-9.571;DP=413;FS=20.290;HRun=0;HaplotypeScore=44.5887;InbreedingCoeff=0.9801;MQ=90.15;MQ0=1;MQRankSum=-4.844;QD=47.62;ReadPosRankSum=1.506;VQSLOD=3.7375;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:45.13:0,45,624	0/0:4,0:4:12.04:0,12,172	0/0:19,0:19:11.44:0,11,605	0/0:15,0:15:35.81:0,36,434	1/1:1,15:16:42.14:767,42,0	1/1:0,23:23:60.21:1099,60,0	1/1:0,9:9:24.08:440,24,0	1/1:1,29:31:87.29:1549,87,0	1/1:3,7:10:27.09:494,27,0	1/1:2,12:14:36.12:660,36,0	1/1:0,16:16:45.15:822,45,0	1/1:0,9:9:24.08:440,24,0	1/1:0,11:11:30.10:550,30,0	1/1:0,15:16:45.15:825,45,0	1/1:0,15:15:36.12:660,36,0	1/1:1,11:12:33.11:603,33,0	0/0:17,0:17:48.16:0,48,687	1/1:1,10:11:27.09:494,27,0	1/1:2,13:16:42.14:740,42,0	1/1:0,17:17:51.17:925,51,0	1/1:1,14:15:36.12:660,36,0	1/1:1,12:13:33.11:603,33,0	1/1:1,8:8:18.06:330,18,0	1/1:0,11:11:27.09:495,27,0	1/1:0,11:11:24.08:439,24,0	1/1:0,15:15:45.15:814,45,0	1/1:0,25:25:66.23:1210,66,0	1/1:2,16:18:39.13:714,39,0
chr10	42073203	.	GGCAGGAATC	G	15113.31	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=17.666;DP=631;FS=3.900;HRun=0;HaplotypeScore=206.7323;InbreedingCoeff=0.9810;MQ=75.43;MQ0=0;MQRankSum=-17.292;QD=80.39;ReadPosRankSum=6.774;VQSLOD=4.8110;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,126,4733	0/0:12,0:12:36.12:0,36,1563	0/0:16,0:16:47.95:0,48,1898	0/0:16,0:16:42.42:0,42,1718	1/1:0,40:40:99:2968,99,0	0/0:30,0:30:90.30:0,90,3470	0/0:21,0:21:63.22:0,63,2873	0/0:26,0:26:75.26:0,75,3058	1/1:0,21:21:51.18:1651,51,0	1/1:2,34:36:99:3099,105,0	1/1:0,22:22:57.20:1744,57,0	0/0:13,0:13:39.13:0,39,1664	0/0:20,0:20:57.18:0,57,2433	0/0:20,0:20:57.19:0,57,2589	1/1:0,16:16:45.15:1459,45,0	1/1:1,33:34:87.30:2827,87,0	0/0:19,0:19:57.20:0,57,2469	1/1:0,3:3:6.02:195,6,0	0/0:25,0:25:75.24:0,75,2890	0/0:29,0:29:84.23:0,84,2816	0/0:21,0:21:63.22:0,63,2645	0/0:25,0:25:72.24:0,72,2451	0/0:23,0:23:63.22:0,63,2361	0/0:21,0:21:63.21:0,63,2777	1/1:0,16:16:36.12:1170,36,0	0/0:30,0:30:90.27:0,90,3360	0/0:27,0:27:78.27:0,78,3165	0/0:6,0:6:18.06:0,18,835
chr10	42073872	.	T	TG	802.33	PASS	AB=0.853;AC=6;AF=0.107;AN=56;BaseQRankSum=5.540;DP=758;FS=5.729;HRun=0;HaplotypeScore=138.7412;InbreedingCoeff=-0.1201;MQ=64.32;MQ0=0;MQRankSum=-4.743;QD=5.31;ReadPosRankSum=-4.041;VQSLOD=1.9780;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:26:20.29:20,0,286	0/0:17,0:17:51.17:0,51,708	0/0:38,0:26:68.67:0,69,887	0/0:36,0:27:67.41:0,67,890	0/0:40,0:40:99:0,117,1623	0/0:26,0:26:66.01:0,66,892	0/0:22,0:22:54.18:0,54,753	0/0:43,0:42:99:0,120,1604	0/0:17,0:17:39.12:0,39,525	0/1:28,2:30:83.07:83,0,985	0/1:17,5:22:97.51:98,0,624	0/0:25,0:25:62.80:0,63,848	0/0:26,0:26:66.21:0,66,906	0/0:23,0:23:63.20:0,63,857	0/1:15,8:23:99:311,0,520	0/0:33,0:33:72.23:0,72,990	0/0:24,0:24:66.22:0,66,922	0/1:11,2:13:58.27:58,0,383	0/0:32,0:31:93.26:0,93,1263	0/0:40,0:40:99:0,114,1540	0/0:17,0:17:51.17:0,51,711	0/0:23,0:23:60.20:0,60,837	0/0:28,0:28:73.46:0,73,940	0/0:21,0:21:59.37:0,59,780	0/1:25,12:36:99:357,0,913	0/0:41,0:41:99:0,117,1601	0/0:29,0:29:78.13:0,78,1061	0/0:6,0:6:18.06:0,18,251
chr10	42073878	.	T	TTTGTTGTTGTTA	2692.41	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=2.775;DP=784;FS=5.750;HRun=0;HaplotypeScore=302.8056;InbreedingCoeff=0.1253;MQ=60.14;MQ0=1;MQRankSum=-7.171;QD=16.12;ReadPosRankSum=-4.161;VQSLOD=1.3295;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:10,25:36:5.93:196,6,0	0/0:17,0:17:48.12:0,48,1312	0/0:34,0:22:16.48:0,16,473	0/0:41,0:29:69.08:0,69,1173	0/0:41,0:41:99:0,108,2500	0/0:29,0:29:54.17:0,54,1306	0/0:22,0:22:30.09:0,30,582	0/0:42,0:41:85.48:0,85,1568	0/0:15,0:16:21.54:0,22,625	0/1:30,0:30:99:400,0,945	0/1:24,0:24:99:361,0,523	0/0:26,0:26:56.97:0,57,1146	0/0:28,0:28:60.12:0,60,1393	0/0:22,0:22:48.15:0,48,1261	0/1:24,0:24:99:713,0,309	0/0:33,0:33:54.28:0,54,1589	0/0:27,0:27:62.65:0,63,1411	0/1:15,0:15:99:326,0,187	0/0:32,0:31:81.19:0,81,1644	0/0:40,0:40:99:0,102,2197	0/0:17,0:17:33.06:0,33,635	0/0:23,0:23:56.86:0,57,1475	0/0:28,0:28:57.64:0,58,1217	0/0:22,0:22:47.78:0,48,1027	0/1:37,0:35:99:827,0,721	0/0:41,0:41:87.09:0,87,2084	0/0:30,0:30:69.36:0,69,1523	0/0:6,0:6:15.05:0,15,504
chr10	42073896	.	ATTGTTG	A	13138.67	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-5.482;DP=761;FS=8.497;HRun=0;HaplotypeScore=170.6534;InbreedingCoeff=0.9835;MQ=51.17;MQ0=3;MQRankSum=-4.185;QD=26.49;ReadPosRankSum=1.020;VQSLOD=3.7673;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:14.42:0,14,200	0/0:5,0:15:30.41:0,30,189	0/0:24,0:14:23.87:0,24,327	0/0:41,0:25:26.73:0,27,296	1/1:10,32:42:83.56:1186,84,0	1/1:9,20:29:24.08:506,24,0	1/1:5,15:20:9.03:191,9,0	1/1:19,18:36:54.07:714,54,0	1/1:1,16:17:21.07:431,21,0	0/0:35,0:35:59.60:0,60,1214	0/0:24,0:24:60.07:0,60,1042	1/1:6,17:23:33.11:690,33,0	1/1:9,20:30:24.08:509,24,0	1/1:4,25:29:36.12:763,36,0	0/0:21,0:21:57.12:0,57,1028	1/1:4,28:32:41.82:882,42,0	0/0:24,0:24:45.14:0,45,1217	0/0:14,0:14:19:0,19,305	1/1:9,18:26:54.05:949,54,0	1/1:12,30:42:75.04:1316,75,0	1/1:15,0:14:35.80:455,36,0	1/1:5,20:24:45.11:879,45,0	1/1:9,17:26:34.68:703,35,0	1/1:19,4:24:44.82:614,45,0	0/0:38,0:36:86.96:0,87,1581	1/1:8,28:36:75.13:1211,75,0	1/1:10,25:35:39.13:819,39,0	1/1:0,7:7:15.05:318,15,0
chr10	42074301	.	CTCTCTCTCTCTCTCTCTT	C	670.67	PASS	AB=1.000;AC=18;AF=0.333;AN=54;BaseQRankSum=-0.572;DP=546;FS=22.843;HRun=0;HaplotypeScore=210.3867;InbreedingCoeff=0.2776;MQ=50.55;MQ0=20;MQRankSum=2.994;QD=2.59;ReadPosRankSum=-5.470;VQSLOD=-0.0937;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:30.47:0,30,1763	0/0:10,0:10:21.52:0,22,964	0/1:18,0:7:0.56:1,0,13	0/0:21,0:3:2.92:0,3,17	0/1:21,0:20:11.69:12,0,947	0/1:19,0:19:31.85:32,0,86	0/1:23,0:23:29.23:29,0,173	0/1:33,0:29:34.01:34,0,1109	0/1:24,0:22:6.56:7,0,629	0/0:34,0:31:65.95:0,66,3960	0/0:16,0:15:11.09:0,11,47	1/1:16,0:15:8.43:100,8,0	1/1:22,0:22:4.65:61,5,0	1/1:11,0:11:6.95:80,7,0	0/0:11,0:11:10.27:0,10,346	0/0:20,0:20:23.73:0,24,1246	0/0:23,0:22:42.14:0,42,2638	0/0:12,0:11:24.07:0,24,1360	0/0:10,0:8:17.95:0,18,929	0/1:27,0:27:4.01:4,0,593	0/0:21,0:21:11.44:0,11,285	0/1:17,0:16:39.55:40,0,64	1/1:11,0:11:17.94:143,18,0	1/1:8,9:17:6.02:296,6,0	0/0:16,0:15:12.28:0,12,218	0/0:26,0:24:32.71:0,33,1684	0/0:27,0:26:26.80:0,27,1514	./.
chr10	42074305	.	CTCTCTCTCTCTCTT	C	1360.73	PASS	AB=1.000;AC=23;AF=0.426;AN=54;BaseQRankSum=-3.630;DP=530;FS=4.792;HRun=0;HaplotypeScore=177.6819;InbreedingCoeff=0.3414;MQ=49.36;MQ0=15;MQRankSum=3.638;QD=4.49;ReadPosRankSum=-6.621;VQSLOD=0.4617;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:11.59:0,12,1290	0/0:10,0:10:21.51:0,22,687	0/0:22,0:6:1.38:0,1,19	0/0:21,0:3:5.80:0,6,32	0/1:20,0:20:28.95:29,0,682	1/1:19,0:19:32.40:305,32,0	1/1:22,0:22:25.37:243,25,0	0/1:29,0:28:88.38:88,0,520	0/1:24,0:22:29.11:29,0,334	0/0:33,0:31:47.12:0,47,2943	0/0:13,0:12:10.68:0,11,46	1/1:16,0:15:5.37:90,5,0	1/1:4,19:23:5.59:185,6,0	1/1:10,0:10:6:51,6,0	0/0:9,0:9:9.91:0,10,242	0/0:20,0:20:17.09:0,17,676	0/0:25,0:24:27.62:0,28,1912	0/0:12,0:11:24.07:0,24,994	0/0:9,0:7:9.92:0,10,666	0/1:25,0:25:15.44:15,0,436	0/1:18,0:18:8.11:8,0,150	1/1:16,0:15:18.87:152,19,0	1/1:11,0:11:14.95:119,15,0	1/1:16,0:16:6.02:203,6,0	0/0:15,0:14:11.86:0,12,116	0/1:27,0:25:14.13:14,0,1037	0/1:27,0:26:13:13,0,996	./.
chr10	42074319	.	TTC	T	2501.02	PASS	AB=0.973;AC=30;AF=0.556;AN=54;BaseQRankSum=1.564;DP=505;FS=18.404;HRun=0;HaplotypeScore=104.6740;InbreedingCoeff=0.3758;MQ=56.30;MQ0=9;MQRankSum=2.711;QD=7.09;ReadPosRankSum=0.811;VQSLOD=2.1258;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:29,1:30:18.85:19,0,85	0/0:8,0:8:16.09:0,16,187	0/1:31,1:13:54.25:54,0,126	0/0:38,0:14:1.51:0,2,149	0/1:16,2:18:12.55:268,0,13	1/1:18,0:18:0.46:1,0,0	0/0:21,0:21:4.36:0,4,41	1/1:12,17:28:46.66:527,47,0	1/1:21,2:21:32.19:303,32,0	0/0:29,0:27:71.51:0,72,860	0/0:14,0:13:24.05:0,24,319	1/1:13,0:12:0.65:4,1,0	1/1:20,0:20:5.49:26,5,0	0/0:5,0:5:3:0,3,25	0/0:12,0:12:18.06:0,18,258	1/1:19,1:20:17.92:194,18,0	1/1:23,2:25:43.46:460,43,0	0/0:12,0:12:27.05:0,27,356	0/1:11,0:9:48.90:78,0,49	1/1:22,0:22:20.02:306,20,0	1/1:16,0:16:2.46:12,2,0	0/1:10,0:9:0.01:0,0,0	1/1:10,0:10:1.41:3,1,0	1/1:9,0:9:5.64:27,6,0	0/0:12,0:12:15.05:0,15,228	0/1:22,0:20:69.71:292,0,70	1/1:15,0:24:5.56:96,6,0	./.
chr10	42074398	.	CCAAGA	C	1845.34	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=4.680;DP=613;FS=3.340;HRun=0;HaplotypeScore=99.1036;InbreedingCoeff=0.9095;MQ=49.73;MQ0=61;MQRankSum=-2.396;QD=27.14;ReadPosRankSum=2.563;VQSLOD=3.4084;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:25:63.22:0,63,1914	0/0:9,0:9:27.09:0,27,808	0/0:29,0:3:9.03:0,9,276	0/0:22,0:2:6.02:0,6,184	1/1:2,29:27:27.09:559,27,0	0/0:21,0:21:57.20:0,57,1689	0/0:26,0:21:39.13:0,39,1162	0/0:28,0:18:48.16:0,48,1401	1/1:1,21:21:39.13:807,39,0	0/0:18,0:16:48.16:0,48,1417	0/0:29,0:28:78.27:0,78,2345	0/0:23,0:22:45.15:0,45,1381	0/0:23,0:22:44.79:0,45,1374	0/0:23,0:20:42.14:0,42,1289	0/0:23,0:23:63.22:0,63,1937	1/1:2,13:15:29.73:621,30,0	0/0:30,0:29:72.25:0,72,2208	0/0:16,0:14:39.13:0,39,1177	0/0:16,0:12:36.12:0,36,1106	0/0:33,0:32:90.31:0,90,2725	0/0:23,0:21:48.16:0,48,1475	0/0:11,0:11:27.09:0,27,825	0/0:10,0:10:27.09:0,27,810	0/0:25,0:22:45.15:0,45,1363	0/0:15,0:11:33.11:0,33,991	0/0:28,0:27:75.26:0,75,2265	0/0:34,0:32:90.31:0,90,2747	0/0:2,0:2:6.02:0,6,184
chr10	42074755	.	C	CGT	2375.29	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-1.543;DP=390;FS=0.000;HRun=0;HaplotypeScore=90.4383;InbreedingCoeff=0.9271;MQ=56.46;MQ0=14;MQRankSum=1.310;QD=27.62;ReadPosRankSum=1.337;VQSLOD=4.7341;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:20:27.09:0,27,385	0/0:7,0:7:18.05:0,18,235	0/0:16,0:11:20.99:0,21,392	0/0:18,0:14:18.13:0,18,504	0/0:22,0:20:30.08:0,30,410	1/1:8,5:13:21.07:364,21,0	1/1:8,1:8:21.07:357,21,0	0/0:25,0:23:66.22:0,66,981	0/0:11,0:10:14.95:0,15,219	0/0:10,0:10:27.06:0,27,320	0/0:10,0:9:9.03:0,9,120	1/1:6,1:7:15.05:224,15,0	1/1:7,0:7:21.05:291,21,0	1/1:2,3:5:3.01:49,3,0	0/0:18,0:18:9.03:0,9,134	0/0:12,0:12:22.99:0,23,252	0/0:15,0:15:39.13:0,39,551	0/0:8,0:8:18.05:0,18,229	0/0:15,0:15:35.63:0,36,433	0/0:29,0:26:49.24:0,49,634	0/0:16,0:16:17.42:0,17,253	1/1:12,3:13:32.80:529,33,0	1/1:9,7:16:30.10:519,30,0	1/1:9,5:12:15:240,15,0	0/0:14,0:14:14.96:0,15,202	0/0:18,0:18:53.91:0,54,697	0/0:10,0:9:20.04:0,20,258	0/0:8,0:5:14.08:0,14,180
chr10	42074756	.	GCTCTCTCTCT	G	508.62	PASS	AB=0.900;AC=9;AF=0.173;AN=52;BaseQRankSum=2.089;DP=468;FS=16.731;HRun=0;HaplotypeScore=149.7801;InbreedingCoeff=0.5550;MQ=52.46;MQ0=15;MQRankSum=-2.675;QD=5.24;ReadPosRankSum=0.442;VQSLOD=1.8704;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:25:0:0,0,0	0/0:7,0:7:15.05:0,15,488	0/0:16,0:11:9.02:0,9,193	0/0:18,0:14:3.01:0,3,65	0/0:26,0:24:6.02:0,6,259	0/0:23,0:20:12.51:0,13,511	0/0:10,0:9:9.03:0,9,358	0/0:28,0:24:18.06:0,18,704	0/1:19,0:18:0.11:0,0,0	1/1:4,4:10:15.05:413,15,0	./.	0/0:10,0:9:3.90:0,4,43	0/0:9,0:8:6.02:0,6,190	./.	1/1:5,12:18:3:30,3,0	0/0:17,0:17:18.05:0,18,471	0/0:17,0:17:17.53:0,18,412	1/1:6,2:8:6.02:181,6,0	0/0:18,0:17:21.05:0,21,733	0/0:34,0:29:27.54:0,28,608	0/0:18,0:18:9.03:0,9,294	0/0:19,0:17:26.95:0,27,705	0/0:22,0:21:21.54:0,22,829	0/0:15,0:13:0.84:0,1,105	0/1:8,5:14:0:0,0,0	0/0:22,0:22:54.18:0,54,2087	0/0:12,0:13:20.10:0,20,618	0/0:11,0:8:6.02:0,6,181
chr10	42074788	.	TCTCTC	T	117.48	PASS	AB=1.000;AC=12;AF=0.222;AN=54;BaseQRankSum=5.213;DP=425;FS=0.000;HRun=0;HaplotypeScore=113.3001;InbreedingCoeff=0.1650;MQ=35.34;MQ0=26;MQRankSum=-1.465;QD=0.80;ReadPosRankSum=2.218;VQSLOD=2.0057;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:18:0:0,0,0	0/0:9,0:9:17.14:0,17,305	0/0:2,0:1:3:0,3,27	./.	0/0:19,0:17:6.02:0,6,95	0/1:22,0:18:0.50:1,0,211	0/0:14,0:9:8.75:0,9,176	0/0:25,0:12:36.05:0,36,489	0/0:20,0:18:5.61:0,6,49	0/1:17,0:14:99:128,0,175	1/1:8,1:9:0.47:1,0,0	0/1:10,0:9:2.04:2,0,20	0/0:10,0:8:17.21:0,17,184	0/0:9,0:8:2.52:0,3,39	1/1:19,2:21:2.78:42,3,0	0/0:22,0:22:17.93:0,18,164	0/0:8,0:8:16.59:0,17,188	0/1:7,0:6:43.53:44,0,67	0/0:15,0:12:28.65:0,29,500	0/0:25,0:20:15.50:0,15,89	0/0:10,0:8:6.02:0,6,111	0/1:22,0:20:1.59:2,0,222	0/0:28,0:26:22.37:0,22,329	0/0:12,0:10:2.20:0,2,32	1/1:16,1:16:0.47:2,0,0	0/0:20,0:20:51.95:0,52,954	0/0:18,0:16:22.16:0,22,395	0/0:12,0:6:9.03:0,9,129
chr10	42076899	.	TCACACACACA	T	2287.11	PASS	AB=0.777;AC=12;AF=0.231;AN=52;BaseQRankSum=-0.619;DP=517;FS=42.146;HRun=0;HaplotypeScore=181.0974;InbreedingCoeff=0.3983;MQ=44.12;MQ0=26;MQRankSum=-0.611;QD=13.53;ReadPosRankSum=-0.018;VQSLOD=1.5054;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:43:63.65:0,64,2048	0/0:7,0:7:12.04:0,12,340	./.	./.	0/0:22,0:22:5.35:0,5,264	0/0:7,0:14:3.46:0,3,24	0/0:19,4:19:0.47:0,0,1	0/0:15,0:13:23.90:0,24,532	0/0:24,0:22:23.74:0,24,635	1/1:9,7:19:17.26:648,17,0	0/1:9,9:17:0:0,0,0	0/1:20,2:21:40.04:286,0,40	1/1:14,0:19:26.66:651,27,0	0/1:10,9:20:43.87:76,0,44	1/1:25,0:25:4.57:349,5,0	0/0:25,0:24:27.43:0,27,1121	0/0:19,0:17:7.84:0,8,263	0/0:9,0:9:1.83:0,2,15	0/0:4,0:3:5.91:0,6,150	0/0:17,0:17:20.74:0,21,865	0/0:14,0:11:9.03:0,9,371	0/0:10,2:22:2.90:0,3,17	1/1:18,0:18:2.95:70,3,0	0/0:19,1:30:9.32:0,9,63	0/1:21,0:24:33.51:353,0,34	0/0:30,0:28:51.17:0,51,1499	0/0:10,0:10:12.04:0,12,340	0/0:13,0:12:30.10:0,30,1081
chr10	42077863	.	C	CA	29914.80	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-9.593;DP=739;FS=14.900;HRun=1;HaplotypeScore=74.6042;InbreedingCoeff=0.9943;MQ=83.12;MQ0=0;MQRankSum=-8.743;QD=43.99;ReadPosRankSum=4.582;VQSLOD=3.1352;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,33:34:96.33:1535,96,0	0/0:16,0:16:48.16:0,48,671	0/0:22,0:22:63.18:0,63,856	0/0:21,0:21:54.11:0,54,681	1/1:2,44:46:99:2050,129,0	1/1:0,22:22:57.19:911,57,0	1/1:1,23:24:66.23:1055,66,0	1/1:2,46:48:99:2146,138,0	1/1:0,37:37:99:1631,102,0	1/1:2,29:31:93.32:1486,93,0	1/1:2,41:43:99:1679,105,0	1/1:0,21:21:54.18:864,54,0	1/1:0,22:22:66.23:1055,66,0	1/1:0,19:19:54.18:863,54,0	1/1:0,35:35:99:1583,99,0	1/1:1,21:22:60.20:959,60,0	1/1:3,15:18:45.15:719,45,0	1/1:0,9:9:18.06:288,18,0	1/1:0,22:22:66.22:1052,66,0	1/1:2,27:29:84.29:1341,84,0	1/1:4,17:21:48.14:736,48,0	1/1:1,25:26:72.25:1151,72,0	1/1:1,36:37:96.19:1535,96,0	1/1:0,17:17:48.16:767,48,0	1/1:0,19:19:57.19:911,57,0	1/1:2,33:35:99:1636,105,0	1/1:4,32:36:99:1673,105,0	1/1:0,6:6:18.06:288,18,0
chr10	42077927	.	GTGC	G	7092.40	PASS	AB=0.561;AC=13;AF=0.232;AN=56;BaseQRankSum=10.196;DP=760;FS=24.374;HRun=0;HaplotypeScore=149.7950;InbreedingCoeff=0.9091;MQ=78.38;MQ0=0;MQRankSum=-11.394;QD=42.22;ReadPosRankSum=-0.479;VQSLOD=3.9275;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,108,2418	0/0:16,0:16:48.16:0,48,1100	0/0:26,0:26:78.17:0,78,1654	0/0:36,0:36:99:0,99,2094	0/0:39,0:39:99:0,117,2645	0/0:29,0:29:84.29:0,84,1937	0/0:20,0:20:51.18:0,51,1174	1/1:7,23:30:69.19:1075,69,0	0/0:39,0:39:99:0,108,2491	0/0:43,0:43:99:0,123,2796	0/0:23,0:23:69.24:0,69,1590	0/0:29,0:29:84.29:0,84,1929	0/0:22,0:22:66.23:0,66,1519	0/0:23,0:23:66.23:0,66,1520	0/0:39,0:39:99:0,111,2548	0/0:30,0:30:87.28:0,87,1958	0/0:22,0:22:63.22:0,63,1452	0/0:12,0:12:30.10:0,30,691	1/1:3,14:17:42.14:716,42,0	1/1:1,27:28:75.26:1273,75,0	1/1:5,24:29:66.66:1092,67,0	0/0:19,0:19:57.20:0,57,1290	0/0:43,0:43:99:0,126,2832	0/0:22,0:22:63.22:0,63,1443	0/0:23,0:23:63.22:0,63,1446	0/1:5,18:23:6:947,0,6	1/1:1,37:38:99:1836,108,0	1/1:0,3:3:9.03:153,9,0
chr10	42078223	.	AT	A	2322.41	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=9.857;DP=610;FS=7.168;HRun=8;HaplotypeScore=61.6606;InbreedingCoeff=0.9533;MQ=71.44;MQ0=0;MQRankSum=1.607;QD=24.71;ReadPosRankSum=0.760;VQSLOD=4.4476;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,108,1256	0/0:11,0:11:33.09:0,33,387	0/0:12,0:10:27.04:0,27,286	0/0:15,1:15:3.45:0,3,202	1/1:1,38:39:99:1092,114,0	0/0:23,0:23:69.20:0,69,823	0/0:9,0:9:24.06:0,24,278	0/0:42,0:42:99:0,102,1232	1/1:1,15:16:45.07:435,45,0	0/0:29,0:29:78.16:0,78,887	0/0:26,0:27:66.20:0,66,788	0/0:22,0:22:55.97:0,56,646	0/0:20,0:20:60.18:0,60,715	0/0:13,0:13:39.12:0,39,471	0/0:15,0:15:45.12:0,45,523	1/1:2,18:20:51.08:492,51,0	1/1:2,17:19:48.08:463,48,0	0/0:15,0:15:39.08:0,39,455	0/0:19,0:19:54.16:0,54,642	0/0:35,0:35:90.24:0,90,1054	0/0:15,0:15:33.10:0,33,398	0/0:12,0:12:30.09:0,30,362	0/0:31,0:31:84.20:0,84,976	0/0:9,0:9:24.07:0,24,290	0/0:32,0:32:93.24:0,93,1088	0/0:23,0:22:60.15:0,60,687	0/0:37,0:37:99:0,108,1287	0/0:8,0:8:21.06:0,21,248
chr10	42078359	.	GAAAC	G	4165.71	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=3.538;DP=518;FS=0.640;HRun=0;HaplotypeScore=127.5922;InbreedingCoeff=0.6643;MQ=61.78;MQ0=10;MQRankSum=-1.488;QD=10.26;ReadPosRankSum=2.913;VQSLOD=3.1580;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:33:92.82:0,93,1272	0/0:10,0:10:15.03:0,15,230	0/0:31,0:10:20.01:0,20,210	0/0:37,0:15:27.96:0,28,258	1/1:7,8:15:2.49:54,2,0	1/1:22,0:22:15.03:165,15,0	1/1:20,0:20:8.90:109,9,0	1/1:21,0:20:53.85:453,54,0	1/1:18,0:18:37.12:275,37,0	1/1:12,0:12:31.70:242,32,0	1/1:17,0:17:2.94:18,3,0	1/1:11,0:11:6.48:64,6,0	1/1:15,0:15:12.03:137,12,0	1/1:8,0:8:2.91:36,3,0	1/1:15,0:15:5.91:75,6,0	1/1:16,2:18:33.36:311,33,0	1/1:17,0:17:33.35:300,33,0	1/1:14,0:14:29.44:227,29,0	1/1:21,0:21:47.75:406,48,0	1/1:31,0:31:29.78:288,30,0	1/1:9,0:9:8.72:72,9,0	1/1:21,0:20:2.23:10,2,0	1/1:18,0:18:14.91:172,15,0	1/1:27,0:27:2.95:36,3,0	1/1:12,0:12:9.03:113,9,0	1/1:21,0:20:47.81:392,48,0	1/1:19,0:19:15.98:174,16,0	1/1:4,0:4:3.01:37,3,0
chr10	42078361	.	AACAAACACACACACACAC	A	8939.09	PASS	AB=0.794;AC=37;AF=0.661;AN=56;BaseQRankSum=1.303;DP=519;FS=1.708;HRun=0;HaplotypeScore=196.7030;InbreedingCoeff=0.4779;MQ=60.30;MQ0=12;MQRankSum=-1.168;QD=24.36;ReadPosRankSum=0.833;VQSLOD=4.0963;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:38:99:0,102,4700	0/0:7,0:7:15.03:0,15,775	0/0:31,0:10:21.08:0,21,295	0/0:35,0:13:20.91:0,21,372	0/0:13,0:13:9.03:0,9,536	1/1:2,20:22:15.05:752,15,0	1/1:1,17:19:9.03:441,9,0	1/1:20,0:19:53.92:543,54,0	0/1:20,0:20:99:119,0,1164	0/1:1,0:12:99:112,0,211	0/1:1,0:17:8.96:9,0,127	1/1:0,11:12:9.03:390,9,0	1/1:1,13:14:12.04:607,12,0	1/1:0,7:8:5.92:153,6,0	0/0:1,0:15:9.03:0,9,282	0/1:18,0:18:68.72:69,0,1142	1/1:11,0:16:35.89:783,36,0	0/1:13,0:14:51.76:52,0,797	1/1:19,2:21:47.75:738,48,0	1/1:3,29:32:32.78:1054,33,0	1/1:9,0:9:8.79:83,9,0	1/1:2,19:20:8.62:165,9,0	1/1:1,16:17:15.52:740,16,0	1/1:1,26:28:2.76:154,3,0	0/0:1,0:12:9.03:0,9,314	1/1:1,19:19:53.92:986,54,0	1/1:1,18:20:17.56:837,18,0	1/1:0,4:4:3.01:154,3,0
chr10	42078363	.	CAA	C	3807.47	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=2.871;DP=510;FS=2.058;HRun=3;HaplotypeScore=116.2151;InbreedingCoeff=0.6794;MQ=59.91;MQ0=14;MQRankSum=-0.934;QD=9.57;ReadPosRankSum=2.015;VQSLOD=0.6686;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:38:63.67:0,64,930	0/0:7,0:7:14.86:0,15,153	0/0:31,0:10:20.03:0,20,210	0/0:35,0:13:27.37:0,27,257	1/1:11,1:12:4.16:62,4,0	1/1:20,0:20:14.84:104,15,0	1/1:18,0:18:8.95:67,9,0	1/1:21,0:19:53.85:453,54,0	1/1:17,3:20:50.93:484,51,0	1/1:12,0:12:31.67:228,32,0	1/1:17,0:17:2.88:18,3,0	1/1:12,0:12:8.85:57,9,0	1/1:13,0:13:11.90:86,12,0	1/1:8,0:8:2.78:22,3,0	1/1:14,0:14:5.78:47,6,0	1/1:14,3:17:41.71:382,42,0	1/1:17,0:16:19.92:227,20,0	1/1:13,0:13:20.85:197,21,0	1/1:21,0:20:48.15:366,48,0	1/1:29,0:29:29.63:205,30,0	1/1:9,0:9:8.73:72,9,0	1/1:22,0:21:2.97:18,3,0	1/1:18,0:17:14.75:107,15,0	1/1:28,0:28:2.97:22,3,0	1/1:12,0:12:8.98:71,9,0	1/1:21,0:19:47.74:361,48,0	1/1:19,0:19:17.46:126,17,0	1/1:5,0:5:3.87:25,4,0
chr10	42078365	.	A	AAC	454.80	PASS	AB=1.000;AC=13;AF=0.271;AN=48;BaseQRankSum=-5.197;DP=519;FS=2.098;HRun=0;HaplotypeScore=133.0663;InbreedingCoeff=0.0840;MQ=58.44;MQ0=16;MQRankSum=2.825;QD=2.32;ReadPosRankSum=-3.283;VQSLOD=1.8964;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:36,5:40:8.56:300,9,0	1/1:5,2:8:9.03:121,9,0	./.	./.	0/0:17,0:17:5.11:0,5,23	0/1:20,0:20:17.82:18,0,27	0/0:18,0:18:8.22:0,8,39	./.	0/1:21,0:21:26.04:65,0,26	0/0:13,0:13:2.25:0,2,12	0/0:17,0:17:0:0,0,0	0/1:12,0:12:5.26:24,0,5	0/1:13,0:13:5.06:5,0,31	0/0:8,0:8:2.84:0,3,14	0/0:14,0:14:5.68:0,6,28	0/1:19,0:19:12.47:12,0,32	0/0:17,0:16:14.33:0,14,75	0/0:13,0:13:5.31:0,5,22	0/0:20,0:19:8.52:0,9,42	0/0:30,0:29:17.04:0,17,84	./.	1/1:21,0:20:2.92:17,3,0	0/0:18,0:17:11.35:0,11,56	0/0:28,0:28:2.79:0,3,14	0/0:11,0:11:8.52:0,9,42	0/1:22,0:19:8.92:9,0,19	0/1:19,0:19:18.28:18,0,38	0/0:5,0:5:2.43:0,2,13
chr10	42078729	.	C	CT	1512.91	PASS	AB=0.952;AC=7;AF=0.125;AN=56;BaseQRankSum=-4.159;DP=518;FS=0.000;HRun=9;HaplotypeScore=55.1728;InbreedingCoeff=0.7641;MQ=74.26;MQ0=0;MQRankSum=-0.161;QD=18.23;ReadPosRankSum=-0.169;VQSLOD=3.3953;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:77.77:0,78,654	0/0:6,0:6:15:0,15,130	0/1:19,1:17:40.36:40,0,78	0/0:14,0:12:1.97:0,2,68	1/1:2,23:25:63.64:698,64,0	0/0:18,0:18:44.98:0,45,390	0/0:15,1:16:8.83:0,9,305	0/0:29,0:29:74.96:0,75,648	1/1:3,11:14:30.08:332,30,0	0/0:25,0:25:71.98:0,72,622	0/0:22,0:22:41.59:0,42,518	0/0:14,0:14:41.99:0,42,365	0/0:15,0:15:41.89:0,42,355	0/0:15,0:16:40.97:0,41,337	0/0:19,0:19:35.99:0,36,312	1/1:2,21:24:50.19:591,50,0	0/0:18,0:20:41.02:0,41,344	0/0:16,0:16:44.99:0,45,391	0/0:6,0:15:33.33:0,33,184	0/0:20,0:20:53.98:0,54,469	0/0:11,0:11:32.97:0,33,281	0/0:21,0:21:49.23:0,49,419	0/0:13,0:13:32.97:0,33,282	0/0:16,0:16:44.99:0,45,391	0/0:18,0:18:50.96:0,51,437	0/0:26,0:26:68.95:0,69,589	0/0:17,0:17:44.99:0,45,391	0/0:16,0:16:35.97:0,36,308
chr10	42078855	.	ATGTGTGTGTG	A	991.25	PASS	AB=0.943;AC=21;AF=0.500;AN=42;BaseQRankSum=2.825;DP=398;FS=0.000;HRun=0;HaplotypeScore=117.2971;InbreedingCoeff=0.4030;MQ=68.43;MQ0=11;MQRankSum=-2.615;QD=6.65;ReadPosRankSum=1.397;VQSLOD=1.9101;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:16.61:0,17,436	0/0:7,0:7:9.03:0,9,378	./.	./.	./.	1/1:15,1:18:6.02:163,6,0	1/1:10,1:11:6.02:98,6,0	0/0:18,0:18:12.04:0,12,256	1/1:5,0:9:0.47:1,0,0	0/1:16,0:16:0.68:23,0,1	./.	1/1:13,0:14:6.02:168,6,0	1/1:12,4:16:12:266,12,0	1/1:5,3:8:3.01:73,3,0	1/1:10,0:10:3.01:85,3,0	1/1:10,0:12:3.01:71,3,0	0/1:12,0:13:18.42:18,0,76	0/1:8,1:9:78.82:79,0,157	0/0:12,0:11:7.84:0,8,167	0/0:27,0:27:5.36:0,5,31	./.	1/1:11,2:12:2.94:86,3,0	./.	0/0:13,0:11:0:0,0,0	./.	0/0:14,0:13:11.06:0,11,186	0/0:7,0:7:3.01:0,3,49	0/0:4,0:3:8.97:0,9,95
chr10	42078893	.	GTGTGTGTGTGAGAC	G	1614.32	PASS	AB=1.000;AC=24;AF=0.480;AN=50;BaseQRankSum=1.487;DP=283;FS=2.931;HRun=0;HaplotypeScore=82.6793;InbreedingCoeff=0.2550;MQ=37.50;MQ0=23;MQRankSum=-2.051;QD=10.03;ReadPosRankSum=1.950;VQSLOD=0.9250;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:14:16.61:0,17,380	0/0:4,0:4:9.92:0,10,374	0/0:8,0:3:9.03:0,9,152	0/0:18,0:5:13.48:0,13,99	0/0:13,0:12:0.47:0,0,1	1/1:9,0:9:6.83:214,7,0	1/1:15,0:14:4.29:122,4,0	0/1:23,0:21:99:197,0,226	1/1:9,0:8:3.82:16,4,0	1/1:4,0:3:8.94:68,9,0	./.	1/1:3,4:6:6.02:200,6,0	1/1:9,0:8:14.30:316,14,0	1/1:9,0:9:1.93:90,2,0	1/1:1,7:7:3.01:123,3,0	0/1:11,0:9:5.47:60,0,5	0/1:15,0:15:53.18:53,0,310	0/1:7,0:7:99:120,0,139	0/1:9,0:9:98.45:98,0,131	0/1:15,0:13:4.89:5,0,17	0/0:5,0:5:0:0,0,0	1/1:9,1:9:2.87:84,3,0	./.	0/0:8,0:5:0:0,0,0	./.	0/0:6,0:5:11.67:0,12,146	0/0:8,0:7:5.97:0,6,46	0/0:4,0:4:9.44:0,9,72
chr10	42078899	.	GTGTGAGAC	G	1543.67	PASS	AB=0.936;AC=35;AF=0.700;AN=50;BaseQRankSum=1.421;DP=289;FS=0.000;HRun=0;HaplotypeScore=69.2536;InbreedingCoeff=0.1062;MQ=35.95;MQ0=25;MQRankSum=-1.572;QD=7.49;ReadPosRankSum=0.457;VQSLOD=1.3310;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:17,0:14:6.08:6,0,43	0/1:4,0:4:11.01:11,0,142	0/0:11,0:4:12.04:0,12,186	0/0:26,0:5:13.48:0,13,99	0/1:13,0:12:0:0,0,0	1/1:9,0:9:6.62:102,7,0	1/1:14,0:13:2.31:52,2,0	1/1:22,0:19:50.39:336,50,0	1/1:9,0:8:2.88:15,3,0	1/1:3,0:2:5.93:40,6,0	./.	1/1:7,0:6:6.02:106,6,0	1/1:10,0:9:13.27:166,13,0	1/1:10,0:9:2.49:37,2,0	1/1:8,0:7:3.01:62,3,0	0/1:11,0:9:5.44:33,0,5	0/1:12,0:13:55.44:55,0,168	0/1:7,0:7:30.86:61,0,31	1/1:10,0:10:5.93:226,6,0	1/1:5,9:12:3.01:38,3,0	0/0:5,0:5:0:0,0,0	1/1:9,0:9:2.56:57,3,0	./.	0/0:6,0:3:0:0,0,0	./.	0/1:2,3:4:15.29:102,0,15	1/1:8,0:7:7.18:70,7,0	1/1:3,0:3:8.98:101,9,0
chr10	42078905	.	GAC	G	1200.68	PASS	AB=0.958;AC=38;AF=0.792;AN=48;BaseQRankSum=1.230;DP=296;FS=2.529;HRun=0;HaplotypeScore=62.5085;InbreedingCoeff=0.2465;MQ=35.34;MQ0=27;MQRankSum=0.469;QD=6.03;ReadPosRankSum=-0.406;VQSLOD=2.5407;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:16,2:15:14.72:108,15,0	0/1:5,0:5:12.40:12,0,25	0/0:13,0:4:12:0,12,114	0/0:30,0:5:3.61:0,4,68	0/0:14,1:14:0:0,0,0	1/1:3,7:10:0.68:54,1,0	1/1:4,9:13:2.42:10,2,0	1/1:16,6:19:53.65:473,54,0	1/1:9,0:8:2.63:14,3,0	1/1:3,0:2:5.93:40,6,0	./.	1/1:7,0:6:5.84:34,6,0	1/1:7,4:10:11.03:74,11,0	1/1:9,2:9:2.04:6,2,0	1/1:7,0:7:2.94:18,3,0	1/1:12,0:10:4.79:22,5,0	0/1:14,0:14:4.40:4,0,112	0/1:5,0:5:7.78:33,0,8	1/1:3,8:10:26.95:243,27,0	1/1:11,2:12:0.47:1,0,0	0/1:4,1:5:0:0,0,0	1/1:5,4:9:2.87:34,3,0	./.	./.	./.	1/1:4,0:3:5.92:39,6,0	1/1:2,6:7:7.78:62,8,0	1/1:2,0:2:5.91:38,6,0
chr10	42079296	.	GACAA	G	17313.24	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=8.672;DP=461;FS=0.490;HRun=0;HaplotypeScore=88.2256;InbreedingCoeff=0.9693;MQ=82.11;MQ0=0;MQRankSum=-5.658;QD=45.09;ReadPosRankSum=3.344;VQSLOD=5.0622;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:51.15:0,51,1258	0/0:8,0:8:21.07:0,21,550	0/0:18,0:18:39.13:0,39,1005	0/0:11,0:11:18.53:0,19,425	1/1:1,25:26:38.79:709,39,0	1/1:0,9:9:27.09:474,27,0	1/1:1,10:11:27.09:491,27,0	1/1:5,22:27:66.16:1093,66,0	1/1:1,12:13:30.10:529,30,0	1/1:0,20:20:57.20:1019,57,0	1/1:1,16:17:42.14:743,42,0	1/1:0,18:18:54.19:981,54,0	1/1:1,17:17:48.16:872,48,0	1/1:0,21:21:60.21:1090,60,0	1/1:1,23:24:66.22:1166,66,0	1/1:1,23:24:63.22:1146,63,0	0/0:23,0:23:69.24:0,69,1800	1/1:1,10:11:27.09:491,27,0	1/1:0,12:12:36.09:557,36,0	1/1:0,22:21:54.19:979,54,0	1/1:1,8:9:21.07:382,21,0	1/1:0,11:11:24.08:436,24,0	1/1:1,8:9:18.06:327,18,0	1/1:0,16:16:39.13:709,39,0	1/1:0,21:21:48.16:873,48,0	1/1:1,11:12:35.71:610,36,0	1/1:1,30:31:84.29:1526,84,0	1/1:0,2:2:6.02:109,6,0
chr10	42080587	.	ACCACACACAC	A	949.88	PASS	AB=1.000;AC=8;AF=0.143;AN=56;BaseQRankSum=5.008;DP=554;FS=3.028;HRun=0;HaplotypeScore=173.1000;InbreedingCoeff=0.7017;MQ=69.42;MQ0=19;MQRankSum=-1.314;QD=9.69;ReadPosRankSum=-2.840;VQSLOD=2.4415;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:26:7.22:7,0,340	0/0:5,0:5:11.99:0,12,183	0/0:34,0:14:14.92:0,15,162	0/0:50,0:20:20.68:0,21,195	1/1:11,3:14:26.83:244,27,0	0/0:22,0:22:37.50:0,37,849	0/0:21,0:19:55.47:0,55,817	0/0:19,0:18:52.13:0,52,452	1/1:13,7:20:54.76:598,55,0	0/0:12,0:12:36.04:0,36,1081	0/0:13,0:13:36.97:0,37,1009	0/0:15,0:15:41.93:0,42,1126	0/0:11,0:10:26.99:0,27,563	0/0:22,0:19:44.81:0,45,754	0/0:20,0:20:48.02:0,48,1061	1/1:2,18:21:11.85:226,12,0	0/0:28,0:27:68.83:0,69,1260	0/0:22,0:20:47.92:0,48,1133	0/0:8,0:8:21.45:0,21,178	0/0:16,0:15:22.96:0,23,311	0/0:29,0:28:54.13:0,54,727	0/0:20,0:20:58.83:0,59,1330	0/0:17,0:17:36.02:0,36,901	0/0:30,0:30:75.28:0,75,1524	0/0:16,0:16:35.96:0,36,1152	0/1:16,0:16:24.07:24,0,490	0/0:17,0:17:32.45:0,32,450	0/0:7,0:7:20.95:0,21,345
chr10	42080588	.	C	CCA	472.31	PASS	AB=0.951;AC=16;AF=0.381;AN=42;BaseQRankSum=-3.584;DP=563;FS=2.627;HRun=0;HaplotypeScore=116.8066;InbreedingCoeff=0.1113;MQ=68.80;MQ0=19;MQRankSum=1.391;QD=2.36;ReadPosRankSum=-1.117;VQSLOD=2.1079;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:26:2.84:0,3,14	./.	./.	./.	./.	0/0:23,0:23:7.81:0,8,59	0/0:22,0:20:5:0,5,39	./.	0/0:18,0:18:5.68:0,6,28	0/1:13,0:13:39.15:66,0,39	0/1:14,0:14:12.04:99,0,12	1/1:19,0:19:2.99:24,3,0	0/0:8,0:9:5.68:0,6,28	0/1:21,0:19:8.13:38,0,8	1/1:17,1:20:9.01:109,9,0	0/0:21,0:21:5.68:0,6,28	0/0:21,0:28:11.36:0,11,56	0/1:17,5:20:22.62:75,0,23	./.	./.	0/0:28,0:29:0:0,0,0	0/0:21,0:21:8.80:0,9,77	1/1:12,5:17:6.02:76,6,0	1/1:32,1:33:6:60,6,0	0/1:14,2:16:17.69:38,0,18	0/1:14,0:16:17.79:18,0,26	0/0:15,0:17:5.68:0,6,28	1/1:7,0:7:0.89:2,1,0
chr10	42081493	.	C	CA	1942.69	PASS	AB=0.917;AC=15;AF=0.268;AN=56;BaseQRankSum=-0.976;DP=593;FS=1.370;HRun=12;HaplotypeScore=171.4587;InbreedingCoeff=0.8549;MQ=60.34;MQ0=15;MQRankSum=-3.509;QD=12.45;ReadPosRankSum=-0.541;VQSLOD=1.6523;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:19:53.20:357,53,0	0/1:9,1:11:3.76:4,0,71	0/0:38,0:12:1.06:0,1,17	0/0:39,0:16:4.25:0,4,17	0/0:27,0:29:62.32:0,62,493	0/0:16,0:15:30.25:0,30,219	0/0:14,0:14:26.47:0,26,186	0/0:29,0:27:48.04:0,48,356	0/0:8,0:10:14.36:0,14,127	1/1:35,0:31:53.14:353,53,0	1/1:25,1:26:61.96:428,62,0	0/0:10,0:10:26.76:0,27,194	0/0:23,0:23:27.27:0,27,248	0/0:17,0:16:30.18:0,30,217	1/1:22,0:22:53.53:364,54,0	0/0:24,0:24:51.19:0,51,362	1/1:2,17:19:27.04:262,27,0	1/1:5,0:5:11.60:77,12,0	0/0:28,0:26:48.59:0,49,341	0/0:36,0:36:79.15:0,79,562	0/0:9,0:9:11.72:0,12,87	0/0:18,0:17:39.16:0,39,285	0/0:16,0:16:32.66:0,33,240	0/0:15,0:16:17.77:0,18,130	1/1:18,1:19:44.94:292,45,0	0/0:23,0:22:46.30:0,46,342	0/0:32,0:32:80.30:0,80,593	0/0:8,0:8:14.84:0,15,109
chr10	42081496	.	A	AC	4341.67	PASS	AB=0.998;AC=29;AF=0.518;AN=56;BaseQRankSum=-8.818;DP=602;FS=9.763;HRun=0;HaplotypeScore=166.7498;InbreedingCoeff=-0.1766;MQ=54.63;MQ0=19;MQRankSum=1.021;QD=9.26;ReadPosRankSum=-3.805;VQSLOD=3.6615;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,18:19:54.17:689,54,0	0/0:10,0:10:28.53:0,29,285	0/0:39,0:9:20.52:0,21,141	0/0:42,0:18:30.77:0,31,220	0/1:28,1:28:28.62:29,0,133	0/0:16,0:15:3.90:0,4,80	0/1:14,0:14:26.97:27,0,35	0/1:30,0:27:89.02:154,0,89	0/1:10,0:10:17.90:56,0,18	1/1:20,15:31:50.86:785,51,0	1/1:9,16:25:71.21:823,71,0	0/1:12,0:12:1.06:1,0,55	0/0:24,0:24:6.11:0,6,96	0/1:18,0:17:28.94:69,0,29	1/1:10,12:22:45.64:600,46,0	0/1:21,0:21:23.64:24,0,85	0/1:20,0:20:7.78:27,0,8	1/1:2,3:5:14.90:133,15,0	0/1:31,0:27:88.79:89,0,111	0/1:36,0:36:40.20:40,0,209	0/1:8,0:8:9.75:10,0,34	0/1:18,0:17:27.15:27,0,73	0/1:15,0:15:19.58:20,0,71	0/1:15,0:15:41.99:48,0,42	1/1:12,11:23:34.73:581,35,0	0/1:23,0:21:78.32:80,0,78	0/1:32,0:32:2.80:3,0,200	0/1:8,0:8:25.33:28,0,25
chr10	42081517	.	A	AAC	8744.81	PASS	AB=0.810;AC=43;AF=0.768;AN=56;BaseQRankSum=3.369;DP=683;FS=1.517;HRun=0;HaplotypeScore=187.8210;InbreedingCoeff=0.3941;MQ=38.62;MQ0=33;MQRankSum=-2.690;QD=17.45;ReadPosRankSum=3.017;VQSLOD=5.1782;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:13,10:22:50.36:547,50,0	0/0:9,0:9:5.57:0,6,98	0/0:77,0:10:2.47:0,2,146	0/0:72,0:12:8.49:0,8,102	1/1:18,0:27:33.34:368,33,0	1/1:6,16:20:39.02:608,39,0	1/1:2,11:13:30.99:483,31,0	1/1:7,0:21:35.66:318,36,0	1/1:7,0:9:20.70:137,21,0	0/1:27,0:32:99:260,0,147	0/1:18,0:26:99:195,0,145	1/1:9,3:12:29.59:373,30,0	1/1:3,21:27:51.14:789,51,0	1/1:4,7:11:21.04:345,21,0	0/1:22,0:24:29.83:184,0,30	1/1:13,0:22:42.11:373,42,0	0/0:23,0:23:53.81:0,54,671	0/1:5,0:7:8.11:135,0,8	1/1:15,0:26:65.23:430,65,0	1/1:18,0:35:44.74:593,45,0	1/1:5,0:9:5.15:88,5,0	1/1:1,19:20:35.81:486,36,0	1/1:6,13:21:43.16:604,43,0	1/1:3,13:16:18.05:296,18,0	0/1:16,0:22:79.30:194,0,79	1/1:14,0:23:47.57:384,48,0	1/1:15,0:28:17.01:388,17,0	1/1:2,0:7:18.01:168,18,0
chr10	42081529	.	CA	C	4219.15	PASS	AB=0.807;AC=26;AF=0.464;AN=56;BaseQRankSum=6.809;DP=662;FS=6.193;HRun=5;HaplotypeScore=188.7724;InbreedingCoeff=0.2258;MQ=37.15;MQ0=25;MQRankSum=-6.245;QD=12.48;ReadPosRankSum=3.208;VQSLOD=2.6122;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:21:23.01:0,23,214	0/0:13,0:13:38.47:0,38,418	0/0:86,0:11:18.28:0,18,186	0/0:71,0:8:0.15:0,0,12	0/0:26,0:25:45.47:0,45,393	0/1:21,2:21:28.34:112,0,28	0/1:11,1:13:28.42:39,0,28	1/1:14,6:17:47.79:389,48,0	0/0:12,0:12:33.05:0,33,302	0/1:9,14:29:17.68:323,0,18	0/1:9,8:22:12.73:264,0,13	0/1:10,2:12:12.20:69,0,12	0/0:22,0:22:2.72:0,3,105	1/1:13,0:12:4.13:47,4,0	0/1:8,5:26:3.58:239,0,4	0/0:22,0:22:47.59:0,48,459	0/0:24,0:24:50.02:0,50,675	0/1:2,5:9:0.11:133,0,0	1/1:12,8:20:44.84:384,45,0	1/1:15,16:32:49.54:631,50,0	1/1:7,1:7:2.98:48,3,0	0/0:23,0:23:0.85:0,1,107	0/1:17,3:20:14.78:131,0,15	0/1:12,0:12:8.04:22,0,8	0/1:9,8:23:45.97:297,0,46	1/1:16,9:23:20.36:388,20,0	1/1:6,17:24:68.84:564,69,0	1/1:4,2:6:17.64:139,18,0
chr10	42081531	.	AAC	A	7172.26	PASS	AB=0.963;AC=25;AF=0.446;AN=56;BaseQRankSum=4.966;DP=662;FS=0.363;HRun=0;HaplotypeScore=184.5874;InbreedingCoeff=0.6315;MQ=37.18;MQ0=24;MQRankSum=-6.636;QD=25.34;ReadPosRankSum=3.148;VQSLOD=5.5574;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:19:26.91:0,27,270	0/0:14,0:14:41.57:0,42,593	0/0:88,0:12:21.31:0,21,269	0/0:73,0:8:2:0,2,41	0/0:23,0:22:44.80:0,45,530	0/1:22,0:20:26.52:27,0,180	0/0:14,0:14:1.73:0,2,214	1/1:12,7:19:53.75:676,54,0	0/0:14,0:14:35.90:0,36,456	1/1:29,1:30:8.88:729,9,0	1/1:20,1:22:1.33:524,1,0	0/0:12,0:12:3.55:0,4,140	0/0:22,0:22:47.75:0,48,438	0/0:13,0:12:4.89:0,5,138	1/1:22,2:25:16.71:561,17,0	0/0:20,0:20:53.19:0,53,648	0/0:25,0:25:65.37:0,65,1072	1/1:9,1:10:9.77:303,10,0	1/1:12,7:19:50.89:642,51,0	1/1:25,8:34:46.38:1117,46,0	1/1:6,3:8:3.01:83,3,0	0/0:23,0:23:48.59:0,49,396	0/0:18,0:18:8.44:0,8,153	0/1:10,0:10:2.21:2,0,78	0/1:21,3:24:42.50:617,0,43	1/1:21,7:26:29.26:708,29,0	1/1:20,4:24:72.05:955,72,0	1/1:4,2:6:18:229,18,0
chr10	42081533	.	C	CAA	4024.02	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=9.392;DP=647;FS=2.175;HRun=3;HaplotypeScore=197.3601;InbreedingCoeff=0.9140;MQ=42.74;MQ0=23;MQRankSum=-7.152;QD=16.84;ReadPosRankSum=5.508;VQSLOD=1.0061;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:17:15.18:0,15,366	0/0:15,0:15:35.83:0,36,543	0/0:91,0:17:41.51:0,42,428	0/0:73,0:9:8.55:0,9,97	0/0:15,0:14:36.02:0,36,496	0/0:26,0:24:44.43:0,44,550	0/0:14,0:14:38.84:0,39,483	0/1:19,0:19:4.92:165,0,5	0/0:15,0:15:35.93:0,36,497	1/1:22,6:27:46.08:710,46,0	1/1:15,4:19:43.07:468,43,0	0/0:13,0:13:35.99:0,36,417	0/0:21,0:21:50.68:0,51,693	0/0:12,0:12:27.07:0,27,380	1/1:12,12:24:47.23:609,47,0	0/0:16,0:16:31.31:0,31,522	0/0:25,0:25:63.20:0,63,964	1/1:8,2:10:24.51:243,25,0	1/1:18,0:18:28.78:177,29,0	1/1:32,0:32:32.98:430,33,0	1/1:10,0:9:6.38:22,6,0	0/0:23,0:23:51.16:0,51,766	0/0:21,0:21:37.75:0,38,436	0/0:10,0:10:15.52:0,16,215	1/1:16,4:20:53.82:565,54,0	1/1:27,0:25:25.76:238,26,0	1/1:26,0:26:38.65:332,39,0	1/1:6,0:6:14.53:67,15,0
chr10	42081540	.	CCAA	C	6275.80	PASS	AB=1.000;AC=30;AF=0.536;AN=56;BaseQRankSum=8.547;DP=650;FS=3.102;HRun=0;HaplotypeScore=186.5713;InbreedingCoeff=0.8028;MQ=51.43;MQ0=18;MQRankSum=-10.657;QD=17.53;ReadPosRankSum=6.304;VQSLOD=4.6535;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:14:18.22:0,18,92	0/0:14,0:14:36.20:0,36,751	0/0:92,0:21:43.62:0,44,602	0/1:69,0:12:51.09:54,0,51	0/1:15,0:14:10.33:152,0,10	0/0:25,0:24:59.97:0,60,867	0/0:13,0:13:39.01:0,39,575	1/1:12,7:19:52.30:495,52,0	1/1:14,0:15:7.29:193,7,0	1/1:9,16:26:48.47:640,48,0	1/1:8,13:21:45.36:461,45,0	0/0:13,0:13:38.34:0,38,645	0/0:23,0:23:53.94:0,54,885	0/0:15,0:15:39.03:0,39,554	1/1:22,4:27:53.47:439,53,0	1/1:16,0:16:1.31:172,1,0	0/0:27,0:27:66.98:0,67,1092	1/1:3,5:9:26.81:284,27,0	1/1:11,7:19:52.52:489,53,0	1/1:12,20:32:81.59:818,82,0	1/1:8,1:9:5.78:49,6,0	0/0:24,0:24:53.27:0,53,902	0/0:21,0:21:45.06:0,45,581	0/0:10,0:10:16.61:0,17,236	1/1:10,9:20:49.99:479,50,0	1/1:9,15:25:67.95:664,68,0	1/1:5,19:27:67.81:710,68,0	1/1:5,2:7:20.53:178,21,0
chr10	42081541	.	CAAA	C	3184.51	PASS	AB=0.892;AC=26;AF=0.464;AN=56;BaseQRankSum=7.756;DP=645;FS=0.381;HRun=12;HaplotypeScore=196.2285;InbreedingCoeff=0.5442;MQ=51.72;MQ0=18;MQRankSum=-9.012;QD=8.92;ReadPosRankSum=8.045;VQSLOD=-0.5522;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:15:14.30:0,14,109	0/0:13,0:14:39.13:0,39,705	0/0:83,0:21:18.68:0,19,534	0/1:65,0:12:37.43:37,0,69	1/1:4,11:14:30.05:378,30,0	0/0:24,0:23:54.17:0,54,919	0/0:13,0:13:27.05:0,27,423	0/1:18,0:19:10.60:118,0,11	1/1:3,12:15:36.08:445,36,0	0/1:25,0:26:6.34:184,0,6	0/1:18,0:21:18.76:177,0,19	0/0:12,0:13:36.10:0,36,623	0/0:22,0:23:48.15:0,48,765	0/0:15,0:15:33.10:0,33,537	1/1:14,5:27:6.32:169,6,0	1/1:3,13:16:36.10:455,36,0	0/0:26,0:27:60.15:0,60,978	1/1:7,0:9:14.42:123,14,0	0/1:19,1:20:25.16:145,0,25	1/1:30,0:32:25.63:307,26,0	0/1:4,0:9:13.49:13,0,14	0/0:24,0:24:45.11:0,45,757	0/0:20,0:20:39.05:0,39,572	0/0:10,0:11:15:0,15,261	1/1:17,0:20:23.79:189,24,0	1/1:26,0:25:34.48:275,34,0	1/1:26,0:27:46.85:339,47,0	1/1:7,0:7:1.97:36,2,0
chr10	42082266	.	CAAA	C	9718.91	PASS	AB=0.542;AC=39;AF=0.696;AN=56;BaseQRankSum=5.669;DP=646;FS=0.382;HRun=12;HaplotypeScore=122.3335;InbreedingCoeff=0.8940;MQ=69.99;MQ0=6;MQRankSum=0.583;QD=22.50;ReadPosRankSum=4.028;VQSLOD=3.4749;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:2,0:18:11.21:0,11,24	0/0:12,1:15:1.20:0,1,610	0/0:47,0:18:27.68:0,28,296	0/0:30,0:19:8.67:0,9,202	0/0:24,0:26:70.07:0,70,1201	1/1:1,0:15:26.48:161,26,0	1/1:5,0:26:37.64:222,38,0	1/1:5,27:33:74.40:898,74,0	0/0:20,0:20:51.15:0,51,899	1/1:2,22:25:64.76:818,65,0	1/1:5,31:36:84.12:1039,84,0	1/1:2,0:14:25.14:157,25,0	1/1:1,0:12:20.40:125,20,0	1/1:0,0:10:23.54:144,24,0	1/1:5,19:24:57.09:695,57,0	0/0:28,0:31:81.19:0,81,1353	0/0:24,0:25:56.80:0,57,946	1/1:1,7:8:18.06:227,18,0	1/1:1,19:20:60:675,60,0	1/1:1,33:34:96.08:1145,96,0	1/1:0,13:13:27.09:341,27,0	0/1:4,0:26:0.66:151,0,1	1/1:1,0:26:41.82:294,42,0	1/1:2,0:16:20.59:126,21,0	1/1:1,24:25:60.19:758,60,0	1/1:4,18:23:57.08:683,57,0	1/1:2,28:30:60.18:758,60,0	1/1:1,11:12:24.05:303,24,0
chr10	42082918	.	A	AT	4817.07	PASS	AB=0.920;AC=11;AF=0.196;AN=56;BaseQRankSum=-4.942;DP=673;FS=3.782;HRun=4;HaplotypeScore=69.1687;InbreedingCoeff=0.8786;MQ=61.03;MQ0=1;MQRankSum=0.459;QD=31.90;ReadPosRankSum=1.206;VQSLOD=5.4991;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,105,1191	0/0:20,0:20:60.16:0,60,670	0/0:13,0:13:30.02:0,30,307	0/0:8,0:7:18.05:0,18,198	0/0:22,0:22:66.19:0,66,749	0/0:32,0:32:81.21:0,81,909	0/0:25,0:25:68.84:0,69,761	0/0:30,0:30:84.24:0,84,952	0/0:27,0:27:81.22:0,81,909	1/1:2,28:30:84.28:1148,84,0	1/1:0,18:18:54.18:737,54,0	0/0:25,0:25:75.21:0,75,850	0/0:27,0:27:81.20:0,81,899	0/0:20,0:20:57.16:0,57,647	1/1:2,33:35:93.31:1272,93,0	0/0:26,0:26:78.22:0,78,885	0/0:25,0:25:72.20:0,72,816	1/1:1,24:25:38.25:908,38,0	0/0:23,0:23:60.16:0,60,675	0/0:24,0:24:69.20:0,69,783	0/0:24,0:24:72.19:0,72,804	0/0:24,0:24:69.20:0,69,782	0/0:31,0:30:90.26:0,90,1020	0/0:18,0:18:51.13:0,51,569	1/1:0,20:20:54.18:739,54,0	0/1:21,2:23:12.90:13,0,646	0/0:35,0:35:99:0,102,1156	0/0:3,0:3:9.03:0,9,102
chr10	42083462	.	GAAC	G	12648.84	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=17.034;DP=771;FS=6.155;HRun=0;HaplotypeScore=125.6561;InbreedingCoeff=0.9977;MQ=75.38;MQ0=0;MQRankSum=-1.774;QD=30.70;ReadPosRankSum=6.427;VQSLOD=4.6654;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,40:53:99:1475,102,0	0/0:15,0:15:33.11:0,33,675	0/0:33,0:32:38.43:0,38,766	0/0:32,0:31:54.18:0,54,1015	0/0:31,0:31:72.24:0,72,1435	1/1:0,28:28:72.24:1041,72,0	1/1:5,20:25:54.14:757,54,0	0/0:33,0:33:57.19:0,57,1123	0/0:35,0:35:93.30:0,93,1861	1/1:6,20:26:63.18:858,63,0	1/1:5,22:27:63.04:817,63,0	1/1:5,18:23:42.14:607,42,0	1/1:5,17:22:45.07:604,45,0	1/1:4,28:33:78.10:1034,78,0	1/1:7,27:34:75.17:1038,75,0	0/0:28,1:29:34.93:0,35,1492	1/1:9,23:32:69.20:998,69,0	1/1:1,12:13:21.07:304,21,0	0/0:26,0:26:60.21:0,60,1213	0/0:21,0:21:48.62:0,49,946	0/0:41,0:41:99:0,114,2274	1/1:3,19:22:54.14:757,54,0	1/1:3,11:14:26.94:367,27,0	1/1:3,38:41:99:1495,105,0	1/1:4,15:19:36.08:497,36,0	0/0:23,1:24:16.83:0,17,1073	0/0:24,0:24:57.20:0,57,1165	0/0:15,0:15:39.13:0,39,766
chr10	42087205	.	CT	C	4491.95	PASS	AB=0.941;AC=20;AF=0.357;AN=56;BaseQRankSum=13.456;DP=582;FS=2.415;HRun=9;HaplotypeScore=54.3222;InbreedingCoeff=0.8810;MQ=65.36;MQ0=0;MQRankSum=-1.200;QD=20.99;ReadPosRankSum=0.007;VQSLOD=5.4281;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,18:19:51.03:467,51,0	0/0:15,0:15:42.12:0,42,485	0/0:9,0:9:17.99:0,18,190	0/1:8,0:8:0.74:1,0,79	0/0:33,2:35:35.33:0,35,892	0/0:24,0:24:63.19:0,63,724	0/0:22,0:22:60.15:0,60,680	1/1:6,28:34:78.03:710,78,0	0/0:21,0:21:54.16:0,54,623	0/0:33,0:33:81.23:0,81,925	0/0:26,0:26:75.20:0,75,848	0/0:19,0:19:54.16:0,54,623	0/0:20,0:20:57.15:0,57,639	0/0:15,0:15:42.12:0,42,479	0/0:25,0:24:72.20:0,72,821	0/0:23,0:23:60.16:0,60,681	1/1:0,18:18:51.03:467,51,0	0/1:13,2:15:12.80:13,0,373	1/1:2,11:13:32.99:296,33,0	1/1:1,25:26:75.01:679,75,0	1/1:2,12:14:30.01:275,30,0	0/0:31,0:31:84.20:0,84,944	0/0:20,0:20:51.14:0,51,579	0/0:10,0:10:30.09:0,30,346	0/0:20,0:20:54.15:0,54,614	1/1:2,26:28:46.43:679,46,0	1/1:2,28:30:72.04:659,72,0	1/1:0,9:9:27.01:247,27,0
chr10	42088080	.	GTCTGTC	G	924.33	PASS	AB=0.559;AC=13;AF=0.241;AN=54;BaseQRankSum=5.857;DP=636;FS=1.870;HRun=0;HaplotypeScore=177.8445;InbreedingCoeff=0.8345;MQ=71.41;MQ0=7;MQRankSum=-5.053;QD=6.90;ReadPosRankSum=-0.090;VQSLOD=2.4211;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:36.09:0,36,1090	0/0:7,0:7:21.07:0,21,632	0/0:45,0:22:21.20:0,21,858	0/0:65,0:42:14.02:0,14,707	0/0:23,0:23:60.19:0,60,1753	1/1:6,18:24:6.02:130,6,0	1/1:2,15:17:3.01:65,3,0	0/0:26,0:26:60.20:0,60,1653	0/0:17,0:17:39.13:0,39,1189	0/0:26,0:26:69.24:0,69,2137	0/0:18,0:18:33.11:0,33,963	1/1:6,12:18:15.02:313,15,0	1/1:7,14:21:18.03:386,18,0	1/1:3,11:14:3.01:65,3,0	0/0:30,0:30:33.27:0,33,1776	0/0:30,0:30:66.20:0,66,1962	0/0:19,0:19:36.12:0,36,1087	0/0:16,0:16:42.14:0,42,1278	0/0:11,0:11:27.09:0,27,866	0/0:28,0:28:36.10:0,36,1015	0/0:19,0:19:15.05:0,15,506	0/1:4,15:19:0.02:0,0,0	1/1:8,13:20:5.99:122,6,0	./.	0/0:11,0:11:27.08:0,27,737	0/0:29,0:28:72.15:0,72,2021	0/0:22,0:22:31.35:0,31,966	0/0:11,0:11:24.08:0,24,809
chr10	42088117	.	C	CA	338.50	PASS	AB=0.910;AC=5;AF=0.089;AN=56;BaseQRankSum=6.186;DP=717;FS=0.000;HRun=0;HaplotypeScore=157.4360;InbreedingCoeff=-0.1039;MQ=55.83;MQ0=20;MQRankSum=-1.240;QD=2.97;ReadPosRankSum=-0.743;VQSLOD=2.9659;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:21.07:0,21,292	0/0:10,0:10:30.10:0,30,419	0/0:64,0:15:30.65:0,31,400	0/0:78,0:24:27.72:0,28,424	0/0:27,0:27:69.20:0,69,929	0/0:27,0:27:36.12:0,36,503	0/0:15,0:15:18.04:0,18,234	0/0:34,0:32:93.31:0,93,1284	0/0:15,0:15:42.14:0,42,587	0/0:29,0:29:84.26:0,84,1156	0/0:14,0:14:39.13:0,39,545	0/0:20,0:19:33.11:0,33,461	0/0:12,0:12:21.03:0,21,271	0/0:15,0:15:12.04:0,12,167	0/0:33,0:33:90.30:0,90,1247	0/0:35,0:35:96.29:0,96,1321	0/0:24,0:24:25.90:0,26,326	0/0:20,0:20:57.19:0,57,796	0/1:8,3:10:99:113,0,264	0/1:30,0:30:6.54:7,0,174	0/1:16,7:23:99:134,0,144	0/0:24,0:24:30.10:0,30,418	0/0:16,0:16:17.93:0,18,251	0/0:20,0:20:2.91:0,3,42	0/0:16,0:16:42.13:0,42,569	0/1:36,0:36:99:171,0,598	0/1:14,0:14:27.37:27,0,158	0/0:15,0:14:24.08:0,24,336
chr10	42088123	.	GTCTCTGTCTCTGTCTC	G	3139.38	PASS	AB=0.534;AC=13;AF=0.241;AN=54;BaseQRankSum=4.962;DP=716;FS=2.566;HRun=0;HaplotypeScore=267.1128;InbreedingCoeff=0.8697;MQ=54.08;MQ0=14;MQRankSum=-4.167;QD=17.34;ReadPosRankSum=-0.313;VQSLOD=2.5265;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:5,34:39:0:0,0,0	0/0:9,0:9:24.07:0,24,1202	0/0:56,0:14:10.84:0,11,187	0/0:73,0:19:20.12:0,20,228	0/0:27,0:27:63.22:0,63,2652	0/0:28,0:28:45.15:0,45,1581	0/0:15,0:15:21.07:0,21,832	1/1:34,0:32:56.68:785,57,0	0/0:16,0:16:42.14:0,42,1782	0/0:30,0:30:69.22:0,69,2573	0/0:16,0:16:42.14:0,42,2105	0/0:20,0:19:30.10:0,30,1320	0/0:11,0:11:18.06:0,18,764	0/0:14,0:14:9.03:0,9,413	0/0:36,0:36:93.32:0,93,3945	0/0:34,0:34:96.31:0,96,4386	0/0:24,0:24:11.07:0,11,216	0/0:22,0:22:63.19:0,63,2673	1/1:10,0:10:17.11:435,17,0	1/1:2,26:28:5.95:155,6,0	1/1:22,0:22:19.26:453,19,0	0/0:27,0:27:39.13:0,39,1373	0/0:17,0:17:18.06:0,18,526	0/0:22,0:22:10.78:0,11,238	0/0:17,0:17:45.15:0,45,1358	1/1:6,28:34:9.07:1226,9,0	1/1:4,10:14:6.02:255,6,0	./.
chr10	42088135	.	GTCTC	G	200.97	PASS	AB=1.000;AC=10;AF=0.185;AN=54;BaseQRankSum=5.469;DP=689;FS=1.964;HRun=0;HaplotypeScore=171.0004;InbreedingCoeff=0.3676;MQ=48.94;MQ0=9;MQRankSum=-3.366;QD=1.30;ReadPosRankSum=-2.826;VQSLOD=2.1174;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:0:0,0,0	0/0:8,0:8:21.07:0,21,545	0/0:40,0:7:15.35:0,15,171	0/0:76,0:14:25.30:0,25,287	0/0:29,0:29:81.09:0,81,1814	0/0:26,0:26:51.17:0,51,1215	0/0:15,0:15:24:0,24,492	0/1:27,0:25:6.71:7,0,105	0/0:17,0:17:51.15:0,51,1142	0/0:32,0:32:84.19:0,84,1790	0/0:17,0:17:48.14:0,48,1114	0/0:22,0:21:42.07:0,42,863	0/0:14,0:14:33.11:0,33,664	0/0:15,0:15:15.03:0,15,307	0/0:40,0:40:99:0,108,2293	0/0:34,0:34:99:0,99,2388	1/1:3,22:25:2.68:121,3,0	0/0:23,0:23:65.44:0,65,1455	0/1:11,0:11:19.73:20,0,124	1/1:26,0:26:3:30,3,0	0/1:26,0:26:41.11:41,0,77	0/0:31,0:31:51.17:0,51,1139	0/0:14,0:14:21:0,21,415	0/0:21,0:21:13.64:0,14,317	0/0:19,0:19:48.11:0,48,1017	0/1:29,0:29:74.94:75,0,307	1/1:10,0:10:5.90:43,6,0	./.
chr10	42088197	.	TTGTG	T	1562.31	PASS	AB=0.866;AC=30;AF=0.600;AN=50;BaseQRankSum=2.501;DP=668;FS=5.992;HRun=0;HaplotypeScore=186.6814;InbreedingCoeff=0.2126;MQ=63.50;MQ0=14;MQRankSum=-1.174;QD=3.45;ReadPosRankSum=-0.996;VQSLOD=1.6371;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:33:19.59:0,20,132	0/0:8,0:8:12.03:0,12,193	./.	./.	0/1:20,10:31:39.78:192,0,40	1/1:22,0:18:3:28,3,0	1/1:17,0:19:3:28,3,0	0/1:29,0:27:7.27:13,0,7	1/1:15,9:24:15.05:232,15,0	0/0:20,0:22:8.50:0,8,65	0/0:13,0:18:13.82:0,14,73	1/1:13,0:24:11.95:102,12,0	1/1:10,0:15:5.59:55,6,0	1/1:16,0:16:2.97:9,3,0	0/1:21,2:30:64.43:64,0,92	1/1:19,12:32:26.59:353,27,0	0/0:26,0:26:22.41:0,22,671	0/1:14,2:21:12.92:81,0,13	./.	1/1:26,0:31:20.03:167,20,0	0/1:39,1:40:22.05:79,0,22	0/1:25,0:28:23.53:24,0,45	0/1:17,0:20:0.52:39,0,1	1/1:28,0:29:0.73:2,1,0	0/0:14,1:17:6.20:0,6,38	1/1:18,2:20:8.78:133,9,0	0/1:13,1:14:7.87:76,0,8	1/1:3,1:4:3.01:46,3,0
chr10	42088480	.	TG	T	7879.42	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=13.749;DP=773;FS=5.992;HRun=3;HaplotypeScore=76.0996;InbreedingCoeff=0.9991;MQ=80.39;MQ0=0;MQRankSum=-1.753;QD=33.53;ReadPosRankSum=3.998;VQSLOD=5.3908;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:87.24:0,87,1211	0/0:9,0:9:27.09:0,27,389	0/0:23,0:23:69.18:0,69,935	0/0:28,0:28:66.20:0,66,882	0/0:31,0:31:90.28:0,90,1275	1/1:0,38:38:90.28:1116,90,0	1/1:2,28:30:75.24:930,75,0	0/0:36,0:36:99:0,105,1479	0/0:24,0:24:69.23:0,69,991	0/0:40,0:40:99:0,117,1666	0/0:17,0:17:48.16:0,48,691	1/1:0,31:31:90.28:1116,90,0	1/1:1,22:23:60.19:744,60,0	1/1:0,34:34:99:1265,102,0	0/0:43,0:43:99:0,129,1857	0/0:44,0:44:99:0,129,1856	0/0:27,0:27:81.27:0,81,1166	0/0:14,0:14:42.11:0,42,584	0/0:19,0:19:54.18:0,54,777	0/0:21,0:21:60.20:0,60,863	0/0:47,0:47:99:0,135,1943	1/1:1,33:34:96.30:1185,96,0	1/1:1,24:25:68.82:855,69,0	1/1:1,19:20:54.17:670,54,0	0/0:21,0:21:60.20:0,60,858	0/0:24,0:24:72.24:0,72,1031	0/0:32,0:32:90.27:0,90,1272	0/0:7,0:7:21.07:0,21,302
chr10	42089500	.	GACAC	G	1061.94	PASS	AB=0.908;AC=33;AF=0.750;AN=44;BaseQRankSum=3.267;DP=477;FS=2.401;HRun=0;HaplotypeScore=86.5771;InbreedingCoeff=0.1684;MQ=64.99;MQ0=9;MQRankSum=-2.457;QD=3.31;ReadPosRankSum=1.067;VQSLOD=1.6684;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:26:5.95:46,6,0	0/0:4,0:4:0.47:0,0,1	./.	./.	0/0:14,0:15:11.78:0,12,221	0/1:13,1:15:27.37:37,0,27	0/1:43,1:43:28.59:29,0,116	./.	0/1:4,0:5:18.88:19,0,102	0/1:10,0:10:0.14:1,0,0	1/1:8,4:12:3.01:46,3,0	1/1:10,0:11:6.01:74,6,0	1/1:9,3:12:3.01:46,3,0	1/1:12,1:13:3.01:46,3,0	1/1:13,1:15:6.01:74,6,0	0/0:19,0:19:15.05:0,15,337	1/1:12,0:13:3:28,3,0	0/1:9,1:11:3.45:82,0,3	./.	./.	1/1:33,0:32:0.47:1,0,0	1/1:12,0:12:3:28,3,0	1/1:14,0:14:3.01:46,3,0	1/1:20,9:28:8.45:263,8,0	1/1:13,1:19:18.02:185,18,0	1/1:11,0:12:6.45:50,6,0	1/1:12,0:12:10.26:86,10,0	./.
chr10	42089814	.	CATCT	C	2038.33	PASS	AB=0.911;AC=22;AF=0.440;AN=50;BaseQRankSum=4.825;DP=608;FS=1.524;HRun=0;HaplotypeScore=120.4218;InbreedingCoeff=0.6659;MQ=69.32;MQ0=1;MQRankSum=1.391;QD=7.36;ReadPosRankSum=0.984;VQSLOD=2.7507;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:12,9:21:15.05:226,15,0	0/0:5,0:11:4.79:0,5,58	./.	./.	1/1:13,7:20:14.86:200,15,0	0/0:24,0:32:2.94:0,3,45	0/1:15,0:15:0:0,0,0	./.	1/1:19,0:28:12.01:112,12,0	0/0:30,0:30:39.13:0,39,785	0/0:17,0:16:15.05:0,15,291	0/0:14,0:21:6.02:0,6,95	0/0:24,0:25:8.88:0,9,126	0/0:12,0:15:6.02:0,6,98	0/0:24,0:24:33.11:0,33,734	0/1:18,5:23:99:151,0,361	0/0:15,0:15:2.96:0,3,19	0/0:17,0:17:17.55:0,18,329	1/1:10,6:16:18.03:246,18,0	1/1:24,8:31:11.97:153,12,0	1/1:18,8:26:9.03:135,9,0	0/0:16,0:22:2.92:0,3,52	0/0:16,0:22:6:0,6,99	0/0:14,0:14:5.23:0,5,55	1/1:17,0:25:12.01:112,12,0	1/1:17,10:27:30.10:444,30,0	1/1:19,11:30:24.08:361,24,0	1/1:14,0:14:6.02:77,6,0
chr10	42089861	.	CT	C	87.84	PASS	AB=0.750;AC=1;AF=0.018;AN=56;BaseQRankSum=2.725;DP=573;FS=0.000;HRun=1;HaplotypeScore=97.9210;InbreedingCoeff=-0.0347;MQ=57.97;MQ0=18;MQRankSum=-0.033;QD=5.86;ReadPosRankSum=-0.983;VQSLOD=-0.0560;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,1:23:0.25:0,0,425	0/0:11,0:11:20.40:0,20,262	0/0:18,0:7:15.01:0,15,187	0/0:12,0:8:8.73:0,9,86	0/0:31,0:31:73.47:0,73,955	0/0:27,0:27:33.11:0,33,476	0/0:14,0:13:29.67:0,30,426	0/0:43,0:33:99:0,99,1340	0/0:18,0:18:28.98:0,29,407	0/0:30,0:30:90.30:0,90,1364	0/0:17,0:16:45.15:0,45,681	0/0:21,0:21:38.72:0,39,529	0/0:17,0:17:35.76:0,36,529	0/0:15,0:15:36.12:0,36,517	0/0:23,0:22:66.22:0,66,1013	0/0:20,0:20:52.42:0,52,709	0/1:10,5:15:99:162,0,126	0/0:15,0:14:5.98:0,6,517	0/0:13,0:11:27.35:0,27,258	0/0:27,0:26:53.60:0,54,691	0/0:26,0:26:56.59:0,57,723	0/0:21,0:21:42:0,42,608	0/0:23,0:23:45.11:0,45,640	0/0:13,0:13:27.03:0,27,400	0/0:15,0:15:22.96:0,23,316	0/0:32,0:32:85.56:0,86,984	0/0:25,0:25:53.63:0,54,570	0/0:8,0:6:17.23:0,17,199
chr10	42090227	.	G	GT	5756.41	PASS	AB=0.605;AC=17;AF=0.304;AN=56;BaseQRankSum=4.608;DP=641;FS=1.456;HRun=9;HaplotypeScore=104.2202;InbreedingCoeff=0.9118;MQ=69.32;MQ0=0;MQRankSum=-8.205;QD=25.03;ReadPosRankSum=-2.545;VQSLOD=3.6032;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,27:34:81.19:874,81,0	0/0:10,0:10:26.97:0,27,228	0/0:13,0:13:32.99:0,33,286	0/0:10,0:9:17.99:0,18,155	0/0:31,0:31:71.94:0,72,619	0/0:1,0:22:38.70:0,39,114	0/0:4,0:19:18.33:0,18,54	1/1:9,19:29:48.12:715,48,0	0/0:17,0:17:41.92:0,42,354	0/0:39,0:39:99:0,105,909	0/0:23,0:23:56.97:0,57,494	0/0:3,0:11:16.29:0,16,48	0/0:2,0:28:48.89:0,49,143	0/0:1,0:18:34.63:0,35,102	0/0:28,0:28:77.56:0,78,657	0/0:24,0:24:62.97:0,63,547	0/1:8,14:23:17.45:452,0,17	0/0:17,0:17:47.97:0,48,413	1/1:8,9:17:36.10:398,36,0	1/1:5,20:25:66.17:724,66,0	1/1:5,8:13:24.03:245,24,0	0/0:1,0:23:44.81:0,45,132	0/0:3,0:31:52.66:0,53,155	0/0:0,0:12:24.44:0,24,72	0/0:35,0:35:92.93:0,93,798	1/1:8,27:35:67.19:955,67,0	1/1:15,18:33:73.93:774,74,0	1/1:4,17:21:57.13:620,57,0
chr10	42090270	.	CATCT	C	8951.75	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=6.725;DP=661;FS=11.881;HRun=0;HaplotypeScore=140.0658;InbreedingCoeff=0.9973;MQ=71.26;MQ0=0;MQRankSum=-10.552;QD=40.51;ReadPosRankSum=-1.053;VQSLOD=4.2192;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,28:36:63.22:1117,63,0	0/0:12,0:12:36.12:0,36,880	0/0:25,0:25:66.23:0,66,1641	0/0:17,0:17:48.15:0,48,1107	0/0:31,0:31:84.29:0,84,2177	0/0:31,0:31:84.27:0,84,2073	0/0:15,0:15:33.11:0,33,816	1/1:3,32:35:96.31:1649,96,0	0/0:21,0:21:63.22:0,63,1571	0/0:35,0:35:99:0,99,2535	0/0:25,0:25:69.24:0,69,1764	0/0:15,0:15:45.15:0,45,1143	0/0:21,0:21:60.21:0,60,1559	0/0:23,0:23:66.23:0,66,1714	0/0:26,0:26:72.25:0,72,1820	0/0:28,0:28:78.27:0,78,1999	1/1:6,16:22:35.65:614,36,0	0/0:12,0:12:33.11:0,33,857	1/1:1,12:13:36.11:594,36,0	1/1:3,25:28:66.23:1172,66,0	1/1:2,9:11:15.05:270,15,0	0/0:20,0:20:60.21:0,60,1550	0/0:26,0:26:72.25:0,72,1838	0/0:17,0:17:45.15:0,45,1109	0/0:40,0:40:99:0,114,2844	1/1:6,30:36:99:1718,99,0	1/1:0,26:26:66.23:1186,66,0	1/1:3,11:14:36.12:633,36,0
chr10	42091260	.	G	GCCT	8998.88	PASS	AB=0.939;AC=17;AF=0.315;AN=54;BaseQRankSum=-15.588;DP=651;FS=1.131;HRun=0;HaplotypeScore=134.9558;InbreedingCoeff=0.8973;MQ=94.01;MQ0=1;MQRankSum=-4.318;QD=42.05;ReadPosRankSum=2.259;VQSLOD=6.0211;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:66.23:0,66,1061	0/0:13,0:13:30.10:0,30,482	0/0:28,0:30:84.11:0,84,1219	0/0:31,0:31:5.99:0,6,961	1/1:5,25:31:63.22:1391,63,0	0/0:32,0:32:93.32:0,93,1495	0/0:20,0:20:51.16:0,51,792	0/0:35,0:35:93.29:0,93,1427	1/1:2,25:27:69.24:1495,69,0	1/1:6,14:20:48.16:1038,48,0	1/1:5,16:21:33.11:720,33,0	0/0:21,0:21:63.20:0,63,985	0/0:19,0:19:54.18:0,54,855	0/0:25,0:25:72.25:0,72,1150	1/1:6,17:25:48.16:1032,48,0	1/1:2,22:24:60.21:1324,60,0	0/0:17,0:17:51.17:0,51,814	1/1:0,11:11:30.10:662,30,0	0/0:24,0:24:66.23:0,66,1061	0/0:30,0:30:84.27:0,84,1320	0/0:29,0:28:84.27:0,84,1324	0/0:22,0:22:60.20:0,60,963	0/0:15,0:15:33.10:0,33,505	0/0:22,0:22:63.21:0,63,1013	1/1:3,20:24:60.21:1286,60,0	0/1:29,2:31:51.26:51,0,1124	0/0:29,0:29:78.27:0,78,1253	./.
chr10	42094966	.	CT	C	6205.84	PASS	AB=0.870;AC=33;AF=0.589;AN=56;BaseQRankSum=-9.160;DP=637;FS=0.000;HRun=11;HaplotypeScore=98.3013;InbreedingCoeff=0.9032;MQ=79.99;MQ0=1;MQRankSum=-0.317;QD=14.53;ReadPosRankSum=3.964;VQSLOD=5.1226;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,37:41:98.84:813,99,0	0/0:5,0:5:12.03:0,12,128	0/1:17,3:20:15.23:15,0,245	0/0:10,1:11:5.27:0,5,238	1/1:5,28:34:29.81:590,30,0	0/0:5,0:22:33.17:0,33,179	0/0:5,0:21:27.86:0,28,145	1/1:9,18:27:21.92:387,22,0	1/1:2,20:22:56.93:468,57,0	1/1:0,0:21:33.84:105,34,0	1/1:2,0:25:42.76:123,43,0	0/0:6,0:15:17.34:0,17,108	0/0:2,0:18:17.93:0,18,88	0/0:6,0:25:34.30:0,34,191	1/1:0,0:14:26.48:76,26,0	1/1:2,25:27:74.91:616,75,0	0/0:18,0:20:44.81:0,45,445	1/1:1,0:20:36.67:106,37,0	1/1:3,21:26:35.01:472,35,0	1/1:5,32:38:82.88:671,83,0	1/1:2,17:20:37.98:301,38,0	0/0:6,0:25:56.90:0,57,294	0/0:10,0:27:35.40:0,35,188	0/0:2,0:21:31.36:0,31,166	1/1:4,0:27:44.80:130,45,0	1/1:3,18:22:55.96:446,56,0	1/1:3,21:24:56.91:468,57,0	1/1:1,17:18:50.94:419,51,0
chr10	42097298	.	TA	T	12969.79	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=11.176;DP=616;FS=0.649;HRun=4;HaplotypeScore=66.9689;InbreedingCoeff=0.9956;MQ=78.70;MQ0=0;MQRankSum=-1.866;QD=32.26;ReadPosRankSum=2.702;VQSLOD=5.4270;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,26:29:63.19:756,63,0	0/0:5,0:5:12.04:0,12,168	0/0:14,0:14:42.05:0,42,511	0/0:20,0:20:57.03:0,57,669	0/0:29,0:29:84.28:0,84,1175	1/1:0,21:21:63.19:756,63,0	1/1:0,24:24:63.19:756,63,0	1/1:1,28:29:84.21:964,84,0	0/0:15,0:15:45.07:0,45,575	0/0:24,0:24:69.22:0,69,951	0/0:32,0:32:93.30:0,93,1285	1/1:0,22:22:54.17:648,54,0	1/1:1,18:19:51.16:612,51,0	1/1:1,17:18:51.16:612,51,0	0/0:17,0:17:45.15:0,45,629	0/0:22,0:22:66.22:0,66,924	1/1:0,29:29:81.25:972,81,0	0/0:15,0:15:39.13:0,39,540	1/1:4,20:24:57.15:669,57,0	1/1:1,30:31:90.19:1061,90,0	1/1:0,21:21:51.16:612,51,0	1/1:1,32:33:93.24:1100,93,0	1/1:0,19:19:51.16:612,51,0	1/1:0,19:19:54.17:648,54,0	0/0:21,0:21:63.21:0,63,882	1/1:1,23:24:69.21:827,69,0	1/1:0,17:17:48.15:576,48,0	1/1:0,23:23:66.20:792,66,0
chr10	42097664	.	G	GA	2674.45	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=11.526;DP=533;FS=7.696;HRun=10;HaplotypeScore=68.7055;InbreedingCoeff=0.9026;MQ=74.33;MQ0=2;MQRankSum=-0.274;QD=17.71;ReadPosRankSum=0.957;VQSLOD=4.3011;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:50.89:0,51,418	0/0:6,0:6:14.97:0,15,123	0/0:16,1:16:9.60:0,10,121	0/0:14,0:11:10.73:0,11,70	0/0:26,0:27:52.85:0,53,416	1/1:8,24:32:30.80:548,31,0	1/1:2,9:11:15.04:160,15,0	0/0:26,0:26:53.90:0,54,441	0/0:10,0:10:26.96:0,27,222	0/0:26,1:27:24.64:0,25,410	0/0:21,0:20:41.93:0,42,345	1/1:1,13:15:5.11:245,5,0	1/1:8,16:25:60.15:634,60,0	1/1:5,6:11:15.04:158,15,0	0/0:22,0:22:29.89:0,30,394	0/0:25,0:25:60.40:0,60,493	0/0:10,0:10:26.32:0,26,202	0/0:12,0:12:32.81:0,33,259	0/0:22,0:21:50.90:0,51,413	0/0:26,1:27:32.55:0,33,454	0/0:11,0:11:29.95:0,30,246	1/1:3,18:22:52.98:520,53,0	1/1:6,17:25:2.14:382,2,0	1/1:0,8:10:23.73:220,24,0	0/0:27,0:27:40.19:0,40,531	0/0:16,0:16:32.92:0,33,267	0/0:21,0:21:59.69:0,60,492	0/0:14,1:16:5.98:0,6,245
chr10	42100271	.	AAAAC	A	8207.94	PASS	AB=0.621;AC=31;AF=0.554;AN=56;BaseQRankSum=1.973;DP=572;FS=3.282;HRun=0;HaplotypeScore=120.1505;InbreedingCoeff=0.9120;MQ=58.32;MQ0=2;MQRankSum=-1.952;QD=23.86;ReadPosRankSum=1.003;VQSLOD=4.8186;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,12:22:7.86:632,8,0	0/0:5,0:5:9.03:0,9,216	0/0:24,0:14:9.03:0,9,182	0/0:25,0:14:12.03:0,12,170	1/1:3,26:29:72.05:1043,72,0	0/0:25,0:25:51.16:0,51,1115	0/0:17,0:17:24.05:0,24,472	1/1:17,12:29:36.06:499,36,0	1/1:8,8:16:21.07:337,21,0	1/1:9,14:23:42.14:673,42,0	1/1:7,13:20:32.94:442,33,0	0/0:13,0:13:27.09:0,27,648	0/0:12,0:12:24.08:0,24,574	0/0:11,0:11:18.06:0,18,431	1/1:6,10:16:24.03:386,24,0	1/1:1,10:11:24.08:386,24,0	0/0:15,0:25:21.05:0,21,291	0/1:7,11:18:3.30:216,0,3	1/1:19,9:27:30.06:432,30,0	1/1:16,18:33:48.05:688,48,0	1/1:6,6:12:15.05:241,15,0	0/0:26,0:26:48.16:0,48,1136	0/0:19,0:19:33.11:0,33,726	0/0:25,0:26:54.19:0,54,1263	1/1:10,20:30:45.15:723,45,0	1/1:10,14:25:18.52:692,19,0	1/1:10,14:24:33.11:530,33,0	1/1:1,6:7:18.06:289,18,0
chr10	42102059	.	T	TTCTCTCTC	1416.17	PASS	AB=0.972;AC=33;AF=0.688;AN=48;BaseQRankSum=-2.209;DP=556;FS=9.892;HRun=0;HaplotypeScore=162.1009;InbreedingCoeff=0.1608;MQ=63.08;MQ0=9;MQRankSum=-0.499;QD=3.22;ReadPosRankSum=-2.107;VQSLOD=1.9174;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:17,0:16:0:1,0,0	0/1:8,0:12:15.15:19,0,15	./.	0/1:26,0:17:0:0,0,0	0/1:36,0:35:0:0,0,0	0/0:26,0:26:4.86:0,5,78	0/1:17,0:17:10.73:24,0,11	1/1:33,0:33:16.10:83,16,0	1/1:19,0:18:14.44:145,14,0	1/1:23,0:22:21:451,21,0	1/1:11,0:11:2.97:20,3,0	0/1:17,0:17:54.54:55,0,59	1/1:13,0:13:2.99:24,3,0	0/0:13,0:13:2.50:0,2,9	1/1:25,0:25:13.90:182,14,0	1/1:20,0:19:5.95:115,6,0	0/1:21,0:21:11.93:13,0,12	1/1:9,0:9:5.99:61,6,0	1/1:22,0:20:15.60:184,16,0	./.	./.	0/1:11,0:11:0:0,0,0	./.	0/0:7,0:7:2.94:0,3,18	1/1:23,9:36:3.01:31,3,0	1/1:21,0:21:10.24:68,10,0	0/1:22,0:21:33.10:33,0,47	1/1:28,0:28:8.01:37,8,0
chr10	42102083	.	CTCTCTCTCTCTCTG	C	236.17	PASS	AB=1.000;AC=11;AF=0.229;AN=48;BaseQRankSum=-4.095;DP=448;FS=6.357;HRun=0;HaplotypeScore=133.5008;InbreedingCoeff=-0.0652;MQ=41.77;MQ0=19;MQRankSum=-1.233;QD=1.41;ReadPosRankSum=-3.470;VQSLOD=0.7812;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:17:3.01:0,3,71	0/0:12,0:12:12.93:0,13,510	./.	0/1:13,0:6:0:0,0,0	0/0:24,0:23:5.88:0,6,36	0/0:23,0:22:7.69:0,8,337	0/1:20,0:18:12.73:13,0,130	0/1:22,0:21:95.71:96,0,344	0/0:17,0:16:20.47:0,20,423	0/0:26,0:25:10.71:0,11,1542	0/0:10,0:10:2.03:0,2,6	0/1:15,0:15:10.36:72,0,10	0/0:14,0:13:12.51:0,13,321	1/1:3,5:7:3.01:118,3,0	0/1:19,0:19:6.40:6,0,489	0/0:15,0:14:15.47:0,15,526	0/1:14,0:14:2.95:3,0,379	0/0:10,0:10:11.69:0,12,273	0/1:19,0:15:7.67:8,0,476	0/0:8,0:6:0.47:0,0,1	./.	./.	./.	0/0:9,0:9:4.89:0,5,58	0/0:36,0:36:15.02:0,15,496	0/0:16,0:15:0.09:0,0,374	0/1:26,0:23:25.69:26,0,405	0/1:12,0:12:15.37:15,0,127
chr10	42102085	.	CTCTCTCTCTCTG	C	333.75	PASS	AB=1.000;AC=15;AF=0.300;AN=50;BaseQRankSum=-4.672;DP=426;FS=2.886;HRun=0;HaplotypeScore=116.8055;InbreedingCoeff=-0.0028;MQ=40.68;MQ0=21;MQRankSum=-2.426;QD=1.60;ReadPosRankSum=-3.738;VQSLOD=1.3303;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:17:3.01:0,3,47	0/0:12,0:12:12.93:0,13,439	./.	0/1:11,0:5:0:0,0,0	0/0:24,0:23:5.88:0,6,36	0/0:23,0:22:7.70:0,8,272	0/1:19,0:17:13.14:13,0,102	0/1:21,0:19:99:116,0,247	0/1:17,0:16:3.06:3,0,279	0/1:27,0:26:2.39:2,0,1278	0/0:11,0:10:3:0,3,29	1/1:13,2:15:14.81:152,15,0	0/0:14,0:13:12.50:0,12,222	1/1:7,0:6:3.01:103,3,0	0/1:18,0:18:6.41:6,0,408	0/0:14,0:13:12.98:0,13,412	0/1:13,0:13:2.97:3,0,298	0/0:10,0:10:7.85:0,8,226	0/1:16,0:13:10.18:10,0,379	0/0:8,0:6:0:0,0,0	0/1:11,0:10:0:0,0,0	./.	./.	0/0:7,1:8:5.04:0,5,42	0/0:35,0:35:15:0,15,404	0/0:14,0:13:1.59:0,2,288	0/1:23,0:20:35.20:35,0,330	0/1:10,0:10:16.74:17,0,89
chr10	42102095	.	CTG	C	1072.99	PASS	AB=1.000;AC=28;AF=0.583;AN=48;BaseQRankSum=-3.902;DP=371;FS=11.408;HRun=0;HaplotypeScore=72.2359;InbreedingCoeff=0.2030;MQ=37.20;MQ0=17;MQRankSum=-3.998;QD=4.42;ReadPosRankSum=-2.227;VQSLOD=0.9111;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:14:2.99:23,3,0	0/0:12,0:12:10.75:0,11,80	./.	./.	0/0:22,1:22:8.86:0,9,58	0/0:17,2:18:0.87:0,1,15	1/1:18,0:16:4.34:28,4,0	1/1:23,0:21:53.36:361,53,0	0/1:15,0:14:48.52:72,0,49	0/1:28,0:27:6.46:6,0,330	1/1:10,0:9:2.97:20,3,0	1/1:13,1:14:14.98:138,15,0	1/1:12,0:11:11.68:84,12,0	1/1:7,0:6:2.96:19,3,0	0/1:17,0:17:26.10:26,0,109	0/1:16,0:15:59.91:66,0,60	1/1:10,0:10:4.95:51,5,0	0/1:9,0:9:19.38:19,0,98	0/1:9,0:6:10.28:52,0,10	0/0:8,0:6:0:0,0,0	0/0:8,0:7:0:0,0,0	./.	./.	0/0:6,0:6:4.59:0,5,24	0/0:32,0:32:18.44:0,18,168	1/1:12,0:11:22.62:121,23,0	1/1:20,0:18:6.43:68,6,0	1/1:7,0:7:11.09:66,11,0
chr10	42102136	.	T	TGCGC	807.83	PASS	AB=0.862;AC=15;AF=0.278;AN=54;BaseQRankSum=2.019;DP=407;FS=2.374;HRun=0;HaplotypeScore=99.6262;InbreedingCoeff=0.4522;MQ=56.01;MQ0=7;MQRankSum=0.028;QD=5.42;ReadPosRankSum=-1.875;VQSLOD=1.9834;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:20.51:0,21,343	0/0:13,0:13:27.09:0,27,434	0/0:5,0:4:5.87:0,6,69	0/1:8,0:5:13.31:19,0,13	0/0:22,0:21:36.12:0,36,552	0/0:5,11:15:0.47:0,0,1	1/1:21,0:20:26.96:451,27,0	0/0:29,0:25:25.89:0,26,499	0/0:11,0:11:17.97:0,18,321	0/0:32,0:31:69.20:0,69,1093	0/0:9,0:9:15.04:0,15,216	1/1:16,0:15:15.05:248,15,0	0/1:5,0:12:0:0,0,0	1/1:7,0:7:6.78:170,7,0	0/0:19,0:19:39.12:0,39,624	0/0:13,0:13:33.11:0,33,529	0/1:7,0:8:1.95:2,0,160	0/0:12,0:12:27.09:0,27,428	0/0:18,0:15:20.45:0,20,266	0/1:8,0:6:1.01:1,0,43	0/0:13,0:11:2.34:0,2,47	1/1:6,0:17:8.15:24,8,0	0/0:6,0:6:0:0,0,0	0/1:1,8:10:0:0,0,0	0/0:19,0:19:36.11:0,36,572	0/1:22,0:22:35.24:35,0,449	0/1:19,0:19:5.18:5,0,240	./.
chr10	42103466	.	ACTT	A	835.32	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.211;DP=581;FS=1.923;HRun=0;HaplotypeScore=77.6023;InbreedingCoeff=0.9945;MQ=74.64;MQ0=0;MQRankSum=-0.400;QD=36.32;ReadPosRankSum=1.024;VQSLOD=4.3489;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:48.10:0,48,1023	0/0:10,0:10:27.09:0,27,598	0/0:12,0:12:24.07:0,24,489	0/0:9,0:9:27.09:0,27,558	0/0:31,0:30:90.31:0,90,1995	0/0:31,0:31:90.30:0,90,1953	0/0:11,0:11:30.10:0,30,669	0/0:27,0:27:63.20:0,63,1258	0/0:21,0:21:63.22:0,63,1403	0/0:24,0:24:66.23:0,66,1471	0/0:21,0:21:60.19:0,60,1298	0/0:18,0:18:54.19:0,54,1193	0/0:16,0:16:42.14:0,42,936	0/0:21,0:21:60.21:0,60,1338	0/0:21,0:21:48.15:0,48,1030	0/0:12,0:12:36.10:0,36,723	1/1:3,20:23:57.19:930,57,0	0/0:12,0:12:36.08:0,36,757	0/0:18,0:18:45.14:0,45,951	0/0:40,0:40:99:0,117,2545	0/0:12,0:12:36.11:0,36,764	0/0:31,0:31:87.28:0,87,1842	0/0:25,0:25:72.22:0,72,1520	0/0:10,0:10:30.10:0,30,670	0/0:29,0:29:78.26:0,78,1697	0/0:34,0:34:99:0,99,2211	0/0:26,0:26:78.27:0,78,1739	0/0:19,0:18:57.20:0,57,1273
chr10	42104216	.	C	CTG	24106.38	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-10.466;DP=818;FS=1.190;HRun=0;HaplotypeScore=94.0279;InbreedingCoeff=0.9994;MQ=78.50;MQ0=3;MQRankSum=-4.438;QD=46.63;ReadPosRankSum=3.257;VQSLOD=6.1125;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,45:48:99:2200,120,0	0/0:19,0:19:54.17:0,54,756	0/0:28,0:28:77.99:0,78,1001	0/0:17,0:16:24.33:0,24,401	0/0:40,0:40:99:0,105,1467	1/1:2,30:35:78.27:1430,78,0	1/1:0,20:20:51.17:935,51,0	1/1:6,30:36:90.29:1620,90,0	0/0:30,0:30:90.30:0,90,1290	0/0:41,0:41:99:0,123,1730	0/0:22,0:22:63.18:0,63,866	1/1:0,27:27:75.26:1375,75,0	1/1:0,22:22:57.20:1045,57,0	1/1:0,26:25:72.25:1320,72,0	0/0:32,0:32:84.28:0,84,1204	0/0:30,0:30:87.28:0,87,1229	1/1:3,42:45:99:1925,105,0	0/0:14,0:14:39.13:0,39,549	1/1:2,27:29:78.27:1420,78,0	1/1:3,37:40:99:1978,108,0	1/1:2,44:46:99:2145,117,0	1/1:1,30:31:78.27:1429,78,0	1/1:0,18:18:51.17:935,51,0	1/1:4,25:29:72.25:1320,72,0	0/0:28,0:28:81.27:0,81,1160	1/1:2,26:28:38.28:1387,38,0	1/1:2,23:25:66.23:1203,66,0	1/1:1,9:10:24.08:440,24,0
chr10	42104572	.	GA	G	11547.01	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=0.608;DP=568;FS=2.853;HRun=10;HaplotypeScore=59.8417;InbreedingCoeff=0.9655;MQ=62.17;MQ0=0;MQRankSum=-0.556;QD=21.34;ReadPosRankSum=2.758;VQSLOD=5.9572;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,30:36:89.97:781,90,0	0/0:15,0:15:45.12:0,45,498	0/0:7,1:7:11.62:0,12,106	0/0:4,0:4:8.93:0,9,72	1/1:3,27:30:77.97:677,78,0	1/1:1,21:22:62.99:547,63,0	1/1:2,20:22:50.99:443,51,0	1/1:7,26:33:77.96:673,78,0	1/1:5,17:22:44.97:391,45,0	1/1:1,18:19:53.99:469,54,0	1/1:3,18:21:53.99:469,54,0	1/1:2,14:16:41.99:365,42,0	1/1:0,24:24:65.99:573,66,0	1/1:0,19:19:53.99:469,54,0	1/1:3,19:22:53.98:469,54,0	1/1:1,17:18:44.98:391,45,0	1/1:2,0:27:48.89:144,49,0	1/1:2,13:15:38.99:339,39,0	1/1:2,11:13:32.99:287,33,0	1/1:3,32:35:92.96:807,93,0	1/1:1,13:14:38.99:339,39,0	1/1:1,21:22:56.98:495,57,0	1/1:1,13:14:38.99:339,39,0	1/1:2,13:15:32.99:287,33,0	1/1:3,20:23:56.99:495,57,0	1/1:1,11:12:32.99:287,33,0	1/1:5,26:31:74.88:651,75,0	1/1:2,14:16:41.97:365,42,0
chr10	42106247	.	T	TAATAATAATAA	5866.55	PASS	AC=30;AF=0.577;AN=52;BaseQRankSum=-3.039;DP=299;FS=21.272;HRun=0;HaplotypeScore=93.1190;InbreedingCoeff=0.8066;MQ=40.38;MQ0=9;MQRankSum=-4.978;QD=35.77;ReadPosRankSum=-0.885;VQSLOD=2.6675;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,4:8:9.50:307,10,0	0/0:9,0:8:21.07:0,21,569	0/0:5,0:3:6.02:0,6,137	0/0:6,0:4:5.72:0,6,82	0/0:14,0:14:24.33:0,24,435	1/1:13,0:8:15.05:481,15,0	1/1:4,0:4:6.02:226,6,0	1/1:24,0:15:21.06:319,21,0	0/0:7,0:6:3.42:0,3,26	0/0:24,0:16:9.17:0,9,384	0/0:11,0:11:17.99:0,18,271	1/1:8,0:8:6.49:226,6,0	1/1:8,0:5:3.01:89,3,0	1/1:6,0:4:6.02:160,6,0	0/0:16,0:11:21.06:0,21,401	0/0:12,0:12:21.03:0,21,357	1/1:11,0:10:27.07:546,27,0	0/0:8,0:12:20.93:0,21,347	1/1:6,3:5:9:230,9,0	1/1:11,11:23:36.75:1451,37,0	./.	1/1:6,0:6:11.05:185,11,0	1/1:8,0:8:9.03:366,9,0	./.	0/0:13,0:13:30.10:0,30,623	1/1:5,8:12:23.98:715,24,0	1/1:5,3:5:5.98:183,6,0	1/1:7,0:7:14.94:382,15,0
chr10	42106250	.	T	TAA	2077.62	PASS	AB=0.864;AC=42;AF=0.808;AN=52;BaseQRankSum=-1.179;DP=323;FS=0.000;HRun=14;HaplotypeScore=71.8824;InbreedingCoeff=0.1713;MQ=43.11;MQ0=9;MQRankSum=-1.733;QD=6.86;ReadPosRankSum=-0.148;VQSLOD=0.1450;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:8,0:6:0.85:20,0,1	0/0:9,0:9:11.85:0,12,100	0/1:8,0:4:3.22:3,0,14	0/0:6,0:5:3.46:0,3,23	1/1:11,7:18:19.08:169,19,0	1/1:12,0:8:11.87:85,12,0	1/1:3,0:3:5.90:38,6,0	1/1:24,0:15:9.05:60,9,0	1/1:5,0:7:5.78:40,6,0	1/1:22,5:22:34.18:294,34,0	1/1:6,2:12:11.88:87,12,0	1/1:7,0:7:3.17:36,3,0	1/1:8,0:5:3:26,3,0	1/1:7,0:5:5.20:29,5,0	1/1:8,13:19:20.08:202,20,0	1/1:8,3:13:17.32:151,17,0	1/1:13,0:12:11.81:104,12,0	1/1:9,3:13:24.04:295,24,0	1/1:8,0:4:2.99:24,3,0	1/1:21,0:19:19.39:215,19,0	./.	1/1:6,0:6:5.87:41,6,0	1/1:7,0:7:8.87:57,9,0	./.	0/1:6,8:16:7.74:128,0,8	0/1:14,0:10:36.36:36,0,43	0/1:9,0:5:6.31:19,0,6	0/1:5,0:10:4.69:52,0,5
chr10	42106251	.	A	AATAATAAAAT	5529.75	PASS	AB=1.000;AC=28;AF=0.538;AN=52;BaseQRankSum=-2.134;DP=328;FS=20.055;HRun=0;HaplotypeScore=96.5251;InbreedingCoeff=0.6651;MQ=42.38;MQ0=12;MQRankSum=-4.219;QD=33.72;ReadPosRankSum=1.177;VQSLOD=3.0690;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,0:6:11.92:239,12,0	0/0:10,0:9:21.07:0,21,560	0/0:9,0:4:6.02:0,6,123	0/0:9,0:5:8.39:0,8,110	0/0:18,0:16:29.82:0,30,463	1/1:13,0:8:15.01:505,15,0	1/1:3,0:3:5.98:238,6,0	0/1:27,0:16:20.53:402,0,21	0/0:9,0:7:3:0,3,25	0/0:28,0:22:28.35:0,28,495	0/0:12,0:11:17.93:0,18,271	1/1:7,0:7:8.77:249,9,0	1/1:8,0:5:3:95,3,0	1/1:8,0:5:9:186,9,0	0/0:23,0:19:23.43:0,23,436	0/0:13,0:13:19.80:0,20,357	1/1:12,0:11:27.08:648,27,0	0/0:12,0:12:23.09:0,23,420	1/1:10,0:5:5.97:158,6,0	1/1:17,4:19:28.37:1340,28,0	./.	1/1:7,0:7:14.49:209,14,0	1/1:7,0:7:9.03:378,9,0	./.	0/0:17,0:17:30.10:0,30,647	0/1:14,0:10:35:474,0,35	1/1:9,0:5:4.26:139,4,0	1/1:10,0:10:6.89:271,7,0
chr10	42106252	.	A	ATAATAAAAT	5475.02	PASS	AB=0.859;AC=26;AF=0.481;AN=54;BaseQRankSum=-0.890;DP=338;FS=11.964;HRun=0;HaplotypeScore=87.7436;InbreedingCoeff=0.4015;MQ=44.66;MQ0=13;MQRankSum=-5.149;QD=31.29;ReadPosRankSum=2.520;VQSLOD=3.6607;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,0:5:11.72:196,12,0	0/0:10,0:9:24.06:0,24,568	0/0:11,0:6:6.02:0,6,145	0/0:9,0:5:8.98:0,9,118	0/0:19,0:17:29.54:0,30,451	0/1:3,9:10:6.07:574,0,6	0/1:1,2:3:10.30:273,0,10	0/1:27,0:15:43.18:354,0,43	0/0:9,0:7:3:0,3,25	0/0:27,0:21:18.32:0,18,495	0/0:12,0:11:14.47:0,14,257	1/1:1,7:9:2.33:275,2,0	1/1:2,2:6:3:117,3,0	1/1:3,4:9:8.97:208,9,0	0/0:25,0:20:23.55:0,24,424	0/0:12,0:12:22.77:0,23,367	1/1:10,0:11:27.08:648,27,0	0/0:12,0:12:22.43:0,22,423	1/1:8,0:3:2.93:121,3,0	1/1:18,0:16:17.85:1137,18,0	./.	1/1:5,0:7:14.82:236,15,0	1/1:0,7:12:12.04:457,12,0	1/1:5,0:4:2.97:121,3,0	0/0:17,0:17:33.10:0,33,637	0/1:14,0:10:99:425,0,104	0/1:7,0:3:13.96:115,0,14	0/1:10,0:10:25.15:218,0,25
chr10	42106780	.	TACAC	T	2848.08	PASS	AB=0.774;AC=27;AF=0.500;AN=54;BaseQRankSum=-1.242;DP=551;FS=6.344;HRun=0;HaplotypeScore=130.5942;InbreedingCoeff=0.5718;MQ=53.95;MQ0=21;MQRankSum=0.349;QD=9.37;ReadPosRankSum=2.787;VQSLOD=2.4739;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:24,16:40:14.51:436,15,0	0/0:4,0:4:6.02:0,6,143	0/0:49,0:21:9.03:0,9,112	0/0:47,0:21:5.99:0,6,70	0/1:14,0:13:0:0,0,0	0/1:7,5:12:0.55:77,0,1	1/1:9,4:13:14.80:204,15,0	1/1:20,1:18:3:29,3,0	0/0:21,0:27:15.21:0,15,162	0/0:22,0:20:26.53:0,27,432	0/0:7,0:7:2.61:0,3,23	1/1:9,12:22:32.70:407,33,0	1/1:8,8:17:17.58:364,18,0	0/1:10,0:11:5.42:25,0,5	0/0:11,0:18:6.41:0,6,130	0/0:7,0:13:6.02:0,6,91	0/0:26,0:25:28.43:0,28,679	0/0:13,0:15:20.22:0,20,278	1/1:12,3:15:9.03:142,9,0	0/1:2,4:8:6.52:42,0,7	1/1:33,16:48:27.06:383,27,0	0/1:7,2:12:16:39,0,16	1/1:6,3:10:6.49:96,6,0	1/1:5,6:12:9.02:123,9,0	0/0:6,0:8:6.02:0,6,100	1/1:11,7:16:27.02:374,27,0	1/1:13,8:22:21.06:293,21,0	./.
chr10	42107169	.	GGA	G	226.74	PASS	AB=0.985;AC=15;AF=0.278;AN=54;BaseQRankSum=-2.995;DP=608;FS=0.000;HRun=0;HaplotypeScore=155.3922;InbreedingCoeff=0.3010;MQ=68.80;MQ0=17;MQRankSum=1.681;QD=1.09;ReadPosRankSum=0.987;VQSLOD=2.2584;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:36:11.91:0,12,108	0/0:5,0:5:0:0,0,0	./.	0/0:41,0:18:0:0,0,0	1/1:23,1:23:10.32:82,10,0	0/0:25,0:24:6.80:0,7,43	0/1:23,0:23:8.94:36,0,9	0/1:27,0:26:0:0,0,0	1/1:26,0:26:10.06:105,10,0	0/0:17,0:17:16.13:0,16,204	0/0:14,0:13:8.20:0,8,92	1/1:13,0:13:0.86:3,1,0	0/1:15,0:15:48.73:49,0,76	0/0:18,0:18:2.60:0,3,31	0/0:27,0:27:5.45:0,5,58	0/1:22,1:23:6.81:23,0,7	0/0:11,0:11:1.79:0,2,15	0/0:14,0:13:8.96:0,9,77	0/0:20,0:20:8.99:0,9,79	0/0:25,2:27:9.02:0,9,89	0/0:26,0:25:24.01:0,24,229	1/1:17,0:17:3.01:30,3,0	0/0:22,0:22:0.63:0,1,33	1/1:12,0:12:2.22:31,2,0	0/0:19,1:20:5.30:0,5,32	0/1:27,1:27:5.11:5,0,174	0/0:14,0:14:15.01:0,15,145	0/0:25,0:25:4.35:0,4,314
chr10	42107200	.	G	GAC	959.97	PASS	AB=0.956;AC=11;AF=0.196;AN=56;BaseQRankSum=2.444;DP=649;FS=35.692;HRun=0;HaplotypeScore=174.1960;InbreedingCoeff=-0.1789;MQ=45.87;MQ0=20;MQRankSum=-0.294;QD=3.97;ReadPosRankSum=-0.534;VQSLOD=1.3646;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:14,26:37:32.89:109,0,33	0/0:7,0:7:11.82:0,12,97	0/0:15,0:4:8.72:0,9,76	0/0:34,0:11:1.78:0,2,76	0/0:36,0:35:19.84:0,20,158	0/0:23,0:19:0.93:0,1,69	0/0:25,0:23:5.27:0,5,83	0/1:31,0:30:99:216,0,154	0/0:22,0:22:18.41:0,18,137	0/0:20,0:20:22.12:0,22,285	0/0:28,0:27:7.19:0,7,99	0/0:18,0:17:17.25:0,17,116	0/0:22,0:22:35.99:0,36,220	0/0:23,0:23:8.59:0,9,93	0/0:29,0:29:20.14:0,20,186	0/0:19,0:19:26.48:0,26,241	1/1:14,0:13:2.50:70,3,0	0/1:19,0:18:13.83:14,0,69	0/1:12,0:12:58.28:97,0,58	0/1:24,0:23:67.16:67,0,99	0/1:31,0:30:99:165,0,180	0/0:23,0:22:2.79:0,3,80	0/0:29,0:29:17.16:0,17,164	0/0:15,0:15:6.03:0,6,50	0/0:19,0:19:2.18:0,2,45	0/1:27,0:26:99:170,0,109	0/1:17,0:17:29.13:127,0,29	0/1:27,0:27:65.58:66,0,287
chr10	42107214	.	G	GAC	2865.08	PASS	AB=0.928;AC=22;AF=0.393;AN=56;BaseQRankSum=-1.371;DP=685;FS=29.411;HRun=0;HaplotypeScore=183.1503;InbreedingCoeff=0.1596;MQ=53.23;MQ0=15;MQRankSum=-1.038;QD=7.18;ReadPosRankSum=0.206;VQSLOD=1.6127;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:36,0:33:7.17:197,0,7	0/0:9,0:9:17.82:0,18,149	0/0:20,0:10:19.33:0,19,201	0/0:43,0:22:25.81:0,26,263	0/0:36,0:35:11.05:0,11,88	0/1:25,0:21:10.25:124,0,10	0/1:11,12:23:11.36:99,0,11	1/1:32,0:31:73.54:568,74,0	0/0:27,0:27:7.56:0,8,56	0/0:21,0:21:41.27:0,41,337	0/0:32,0:31:7.22:0,7,105	0/1:20,0:19:27.92:67,0,28	0/1:23,0:23:3.48:179,0,3	0/0:4,16:21:2.48:0,2,39	0/0:27,0:27:8.37:0,8,117	0/1:20,0:20:9.23:9,0,85	1/1:14,0:13:5.30:106,5,0	0/0:16,0:15:7.76:0,8,47	1/1:18,0:18:21:262,21,0	1/1:25,0:24:10.23:280,10,0	0/1:32,0:32:84.62:282,0,85	0/1:11,13:24:4:4,0,15	1/1:32,0:32:6.01:144,6,0	0/0:15,0:15:2.32:0,2,12	0/0:19,0:19:4.22:0,4,49	0/1:27,0:26:6.92:296,0,7	1/1:21,0:21:1.22:270,1,0	0/1:24,0:24:99:148,0,243
chr10	42107220	.	C	CAG	793.18	PASS	AB=0.777;AC=16;AF=0.286;AN=56;BaseQRankSum=1.644;DP=702;FS=4.367;HRun=0;HaplotypeScore=193.9509;InbreedingCoeff=0.5823;MQ=54.66;MQ0=14;MQRankSum=-2.197;QD=2.82;ReadPosRankSum=-0.374;VQSLOD=2.6968;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:31:23.82:0,24,271	0/0:10,0:10:23.92:0,24,325	0/0:24,0:14:32.37:0,32,418	0/0:45,0:23:33.81:0,34,384	1/1:9,29:38:0.75:5,1,0	0/1:26,0:22:16:16,0,161	0/0:22,0:20:1.68:0,2,5	0/0:38,0:37:86.81:0,87,1058	1/1:6,22:28:10.63:102,11,0	1/1:4,18:23:47.07:586,47,0	0/1:6,26:31:0.12:2,0,0	0/0:19,0:18:20.59:0,21,231	0/0:23,0:23:19.03:0,19,348	0/0:21,0:21:0.34:0,0,0	0/1:6,23:29:0.20:1,0,0	1/1:9,14:23:9.03:79,9,0	0/0:14,0:13:16.58:0,17,223	1/1:1,15:15:9.03:128,9,0	0/0:22,0:22:47.51:0,48,584	0/0:25,0:24:44.88:0,45,606	0/0:31,0:31:59.98:0,60,808	0/0:24,1:25:9.83:0,10,97	0/1:29,0:29:25.55:26,0,218	0/1:16,0:16:0.30:1,0,0	0/1:4,16:20:0:3,0,0	0/0:23,0:22:60.11:0,60,774	0/0:23,0:23:60.20:0,60,795	0/0:23,0:23:53.24:0,53,632
chr10	42116737	.	TA	T	2392.51	PASS	AC=28;AF=0.538;AN=52;BaseQRankSum=-5.973;DP=189;FS=1.332;HRun=8;HaplotypeScore=47.9184;InbreedingCoeff=0.7409;MQ=65.63;MQ0=18;MQRankSum=-1.077;QD=19.94;ReadPosRankSum=-0.111;VQSLOD=3.2677;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:22,1:23:62.99:590,63,0	0/0:3,0:3:8.99:0,9,92	0/0:11,0:8:4.22:0,4,104	0/0:4,0:2:1.55:0,2,4	0/0:10,0:10:24.07:0,24,275	1/1:8,0:8:21.03:201,21,0	1/1:6,1:7:18.02:171,18,0	1/1:14,7:19:48.07:459,48,0	0/0:4,0:2:6.02:0,6,72	0/0:8,0:6:18.01:0,18,200	0/0:4,0:3:3.01:0,3,35	./.	1/1:6,1:6:12.02:116,12,0	1/1:3,0:2:6.01:55,6,0	0/0:5,0:5:12.04:0,12,144	0/0:1,0:1:3.01:0,3,36	1/1:10,0:7:17.22:136,17,0	0/0:8,0:5:15.05:0,15,176	1/1:6,0:4:12.02:116,12,0	1/1:2,0:2:6.01:57,6,0	0/0:2,0:1:2.97:0,3,20	1/1:2,0:2:3:28,3,0	1/1:1,0:1:3:29,3,0	./.	0/0:6,0:6:15.05:0,15,179	1/1:11,2:11:30.04:289,30,0	1/1:6,1:6:17.86:157,18,0	1/1:9,1:8:18.03:174,18,0
chr10	42116744	.	A	AT	1722.08	PASS	AB=0.929;AC=30;AF=0.556;AN=54;BaseQRankSum=-3.224;DP=203;FS=5.747;HRun=0;HaplotypeScore=58.3245;InbreedingCoeff=0.4307;MQ=67.68;MQ0=11;MQRankSum=-2.705;QD=11.18;ReadPosRankSum=2.452;VQSLOD=3.8028;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:19,3:23:52.68:411,53,0	0/0:4,0:4:11.99:0,12,130	0/0:14,0:10:9.65:0,10,151	0/0:4,0:2:3.84:0,4,21	0/0:10,0:10:2.06:0,2,135	1/1:6,2:8:15.97:147,16,0	1/1:4,3:7:17.78:124,18,0	1/1:12,10:20:28.20:237,28,0	0/0:4,0:2:5.84:0,6,41	0/0:7,0:6:18.01:0,18,192	0/1:4,0:3:3.53:37,0,4	./.	1/1:8,0:7:6.84:67,7,0	1/1:2,2:3:5.95:42,6,0	0/1:5,0:5:1.94:2,0,67	0/0:1,0:1:2.88:0,3,15	1/1:3,6:8:20.80:257,21,0	0/1:9,0:6:2.59:3,0,89	0/1:9,1:8:6.05:67,0,6	1/1:2,1:3:1.05:36,1,0	0/0:2,0:2:5.19:0,5,27	0/1:1,1:2:1.98:16,0,2	1/1:1,0:1:2.98:22,3,0	0/0:3,0:2:2.22:0,2,7	0/1:8,0:8:11.24:11,0,63	1/1:8,6:13:20.24:183,20,0	1/1:6,2:7:11.83:97,12,0	1/1:8,1:9:18.37:132,18,0
chr10	42116747	.	AT	A	1476.41	PASS	AB=0.892;AC=35;AF=0.648;AN=54;BaseQRankSum=-3.172;DP=200;FS=0.986;HRun=1;HaplotypeScore=59.2426;InbreedingCoeff=0.4096;MQ=70.57;MQ0=8;MQRankSum=-0.236;QD=9.34;ReadPosRankSum=1.056;VQSLOD=1.2247;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:21,3:24:52.47:396,52,0	0/0:4,0:4:9.03:0,9,129	0/1:15,0:11:5.70:6,0,223	0/0:4,0:2:0.82:0,1,3	0/0:10,0:10:9.79:0,10,34	1/1:5,3:8:23.45:149,23,0	1/1:3,4:7:4.85:80,5,0	0/1:11,10:20:31.14:180,0,31	0/0:4,0:2:3.85:0,4,10	0/0:5,0:4:8.39:0,8,32	1/1:4,0:3:0.73:8,1,0	./.	1/1:6,2:7:4.25:67,4,0	1/1:1,3:3:8.92:72,9,0	0/0:5,0:5:7.65:0,8,20	0/0:1,0:1:1.82:0,2,5	1/1:8,0:8:0.98:33,1,0	0/0:8,1:6:10.40:0,10,43	1/1:9,1:8:7.58:77,8,0	1/1:1,3:4:11.53:83,12,0	1/1:1,0:2:5.67:28,6,0	1/1:0,2:2:5.55:29,6,0	1/1:1,0:1:2.97:20,3,0	1/1:0,2:2:2.68:11,3,0	0/1:8,0:8:11.40:24,0,11	1/1:7,6:13:7.25:158,7,0	1/1:5,3:7:4.80:80,5,0	1/1:8,1:9:20.77:139,21,0
chr10	42116748	.	T	TTA	2166.14	PASS	AB=0.902;AC=20;AF=0.370;AN=54;BaseQRankSum=0.743;DP=217;FS=15.826;HRun=0;HaplotypeScore=68.6815;InbreedingCoeff=0.6421;MQ=70.55;MQ0=8;MQRankSum=-1.717;QD=25.79;ReadPosRankSum=-0.440;VQSLOD=2.8148;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:24:35.99:0,36,109	0/0:5,0:5:9.02:0,9,146	0/1:15,0:12:4.79:5,0,174	0/0:5,0:2:0.74:0,1,5	1/1:3,10:13:27.09:543,27,0	0/0:8,0:8:12.44:0,12,31	0/0:7,0:7:9.92:0,10,36	0/0:18,0:20:36.81:0,37,178	1/1:3,2:3:9.03:175,9,0	1/1:2,4:5:11.97:200,12,0	1/1:3,3:5:9.03:179,9,0	./.	0/0:8,0:7:10.41:0,10,37	0/1:4,0:3:1.68:4,0,2	1/1:0,5:5:15.05:296,15,0	1/1:3,1:4:9.03:148,9,0	0/0:3,0:8:19.95:0,20,100	1/1:3,6:6:18.04:324,18,0	0/0:7,0:9:12.43:0,12,31	0/1:4,0:4:4.39:26,0,4	0/1:1,0:2:0.12:4,0,0	0/0:2,0:2:3.11:0,3,8	0/0:1,0:1:1.55:0,2,4	0/0:2,0:2:1.55:0,2,4	1/1:3,7:10:24.08:440,24,0	0/0:12,0:14:21.17:0,21,77	0/0:8,0:7:12.55:0,13,44	0/0:8,0:9:10.58:0,11,27
chr10	42116767	.	G	GGAA	3173.11	PASS	AB=0.941;AC=17;AF=0.304;AN=56;BaseQRankSum=3.415;DP=287;FS=17.400;HRun=0;HaplotypeScore=81.8076;InbreedingCoeff=0.8354;MQ=78.61;MQ0=1;MQRankSum=-6.343;QD=37.78;ReadPosRankSum=0.085;VQSLOD=3.1221;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:81.07:0,81,1306	0/0:6,0:6:15.03:0,15,276	0/0:19,0:17:22.28:0,22,454	0/0:10,0:5:10.39:0,10,169	1/1:7,8:16:39.07:685,39,0	0/0:8,0:8:21.04:0,21,354	0/0:11,0:11:30.04:0,30,513	0/0:27,0:27:72.06:0,72,1098	1/1:1,3:5:15.05:274,15,0	1/1:7,2:8:21.06:359,21,0	1/1:1,6:7:18.89:383,19,0	0/0:4,0:4:12.04:0,12,214	0/0:8,0:8:24.08:0,24,441	0/0:8,0:8:24.08:0,24,437	1/1:4,5:10:27.02:473,27,0	1/1:0,5:5:15.05:363,15,0	0/0:2,0:10:20.42:0,20,126	1/1:4,2:6:14.78:203,15,0	0/0:15,0:15:45.12:0,45,768	0/0:7,0:7:18.05:0,18,318	0/0:3,0:3:6.02:0,6,110	0/0:4,0:4:12.04:0,12,219	0/0:2,0:2:6.02:0,6,106	0/0:3,0:3:6.02:0,6,98	1/1:1,8:10:27.08:606,27,0	0/1:15,1:16:30.61:31,0,600	0/0:11,0:11:29.98:0,30,499	0/0:16,0:16:38.96:0,39,519
chr10	42117095	.	CAGA	C	8036.60	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=16.362;DP=664;FS=0.000;HRun=0;HaplotypeScore=108.2497;InbreedingCoeff=0.9989;MQ=76.77;MQ0=0;MQRankSum=-4.542;QD=42.30;ReadPosRankSum=4.136;VQSLOD=6.3433;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:75.26:0,75,1720	0/0:14,0:14:42.14:0,42,968	0/0:14,0:14:39:0,39,736	0/0:16,0:16:41.95:0,42,775	0/0:31,0:31:81.28:0,81,1809	1/1:2,21:23:60.21:1021,60,0	1/1:1,22:23:54.18:919,54,0	0/0:26,0:26:69.22:0,69,1469	0/0:40,0:40:99:0,117,2563	0/0:31,0:31:93.32:0,93,2099	0/0:15,0:15:45.11:0,45,987	1/1:1,21:22:63.15:1036,63,0	1/1:2,24:26:60.21:1022,60,0	1/1:1,33:34:93.18:1517,93,0	0/0:24,0:24:69.21:0,69,1502	0/0:22,0:22:66.23:0,66,1506	0/0:22,0:22:63.21:0,63,1059	0/0:9,0:9:24.08:0,24,553	0/0:22,0:22:66.20:0,66,1432	0/0:20,0:20:60.21:0,60,1376	0/0:28,0:28:84.27:0,84,1843	1/1:1,16:17:39.60:665,40,0	1/1:2,12:14:36.04:578,36,0	1/1:0,31:31:76.14:1279,76,0	0/0:25,0:25:75.21:0,75,1679	0/0:42,0:42:99:0,120,2693	0/0:40,0:40:99:0,120,2740	0/0:7,0:7:21.07:0,21,484
chr10	42118176	.	TCTTA	T	8933.75	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=7.676;DP=711;FS=1.881;HRun=0;HaplotypeScore=128.1353;InbreedingCoeff=0.9990;MQ=80.18;MQ0=0;MQRankSum=-2.634;QD=44.01;ReadPosRankSum=2.025;VQSLOD=5.5658;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,150,3848	0/0:14,0:14:42.14:0,42,1078	0/0:18,0:18:36.07:0,36,686	0/0:18,0:18:29.97:0,30,569	0/0:30,0:30:87.24:0,87,2237	1/1:4,22:26:51.17:938,51,0	1/1:0,30:30:75.26:1380,75,0	0/0:35,0:35:90.29:0,90,2182	0/0:23,0:23:69.22:0,69,1757	0/0:39,0:39:99:0,102,2442	0/0:27,0:27:78.25:0,78,1948	1/1:2,16:18:42.14:768,42,0	1/1:5,21:26:60.21:1103,60,0	1/1:0,27:27:57.20:1048,57,0	0/0:35,0:35:99:0,102,2620	0/0:19,0:19:57.20:0,57,1494	0/0:16,0:16:45.15:0,45,1132	0/0:7,0:7:21.07:0,21,555	0/0:18,0:18:48.13:0,48,1029	0/0:41,0:41:99:0,114,2950	0/0:31,0:31:84.25:0,84,2046	1/1:2,25:27:75.26:1379,75,0	1/1:1,20:21:54.19:993,54,0	1/1:0,28:28:72.25:1325,72,0	0/0:16,0:16:45.15:0,45,1189	0/0:30,0:30:90.30:0,90,2280	0/0:30,0:30:87.30:0,87,2256	0/0:11,0:11:27.08:0,27,650
chr10	42118962	.	TAA	T	6153.26	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=12.412;DP=579;FS=5.642;HRun=4;HaplotypeScore=68.9803;InbreedingCoeff=0.9975;MQ=77.01;MQ0=2;MQRankSum=-1.941;QD=38.70;ReadPosRankSum=4.897;VQSLOD=4.0694;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:69.24:0,69,1320	0/0:7,0:7:21.07:0,21,383	0/0:17,0:17:51.16:0,51,821	0/0:12,0:12:33.11:0,33,637	0/0:34,0:34:99:0,99,1856	1/1:0,25:25:60.19:918,60,0	1/1:1,14:15:30.10:459,30,0	0/0:26,0:26:72.20:0,72,1240	0/0:19,0:19:54.19:0,54,1043	0/0:30,0:30:87.29:0,87,1622	0/0:30,0:30:87.28:0,87,1587	1/1:0,10:10:27.09:413,27,0	1/1:1,21:22:57.19:873,57,0	1/1:0,22:22:60.20:919,60,0	0/0:15,0:15:45.15:0,45,870	0/0:29,0:29:87.28:0,87,1594	0/0:27,0:27:78.25:0,78,1469	0/0:20,0:20:60.21:0,60,1124	0/0:19,0:19:54.17:0,54,982	0/0:29,0:29:81.21:0,81,1486	0/0:11,0:11:27.09:0,27,503	1/1:0,24:23:63.21:964,63,0	1/1:1,25:26:69.23:1056,69,0	1/1:0,15:14:36.12:551,36,0	0/0:20,0:20:57.20:0,57,1094	0/0:21,0:21:60.21:0,60,1159	0/0:25,0:25:75.26:0,75,1439	0/0:6,0:6:18.05:0,18,315
chr10	42120279	.	C	CA	7258.24	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=0.921;DP=666;FS=2.279;HRun=3;HaplotypeScore=123.9191;InbreedingCoeff=0.9948;MQ=82.65;MQ0=0;MQRankSum=-3.672;QD=38.81;ReadPosRankSum=4.225;VQSLOD=3.5671;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,126,1497	0/0:18,0:18:54.14:0,54,625	0/0:24,0:23:62.84:0,63,660	0/0:21,0:21:51.15:0,51,604	1/1:2,29:31:81.27:1133,81,0	0/0:25,0:25:72.18:0,72,827	0/0:21,0:21:60.18:0,60,720	0/0:39,0:39:99:0,114,1338	1/1:0,19:19:57.19:797,57,0	1/1:3,27:30:84.28:1173,84,0	1/1:1,19:20:57.10:754,57,0	0/0:15,0:15:39.11:0,39,456	0/0:24,0:24:63.15:0,63,731	0/0:21,0:21:60.18:0,60,720	1/1:0,26:26:74.95:1050,75,0	1/1:0,21:21:57.19:798,57,0	0/0:16,0:16:48.13:0,48,563	1/1:0,18:18:51.17:714,51,0	0/0:30,0:30:78.14:0,78,907	0/0:25,0:25:72.22:0,72,863	0/0:24,0:24:69.16:0,69,790	0/0:27,0:27:78.23:0,78,926	0/0:32,0:32:90.23:0,90,1062	0/0:16,0:16:42.12:0,42,492	1/1:2,20:22:60.20:840,60,0	0/0:24,0:24:63.15:0,63,715	0/0:29,0:29:81.23:0,81,957	0/0:4,0:4:12.04:0,12,144
chr10	42120505	.	GA	G	839.39	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.915;DP=618;FS=2.430;HRun=1;HaplotypeScore=97.8935;InbreedingCoeff=0.9956;MQ=89.23;MQ0=0;MQRankSum=-4.066;QD=33.58;ReadPosRankSum=-2.060;VQSLOD=2.9063;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:51.15:0,51,769	0/0:8,0:8:24.08:0,24,384	0/0:23,0:23:63.21:0,63,1002	0/0:24,0:24:72.16:0,72,1049	0/0:36,0:36:99:0,103,650	0/0:22,0:22:64.42:0,64,391	0/0:15,0:15:43.87:0,44,263	0/0:29,0:29:87.27:0,87,1345	0/0:14,0:14:40.81:0,41,237	0/0:32,0:32:89.18:0,89,501	0/0:21,0:21:57.40:0,57,360	0/0:24,0:24:43.55:0,44,387	0/0:21,0:21:35.99:0,36,378	0/0:22,0:22:39.65:0,40,354	0/0:19,0:19:29.74:0,30,285	0/0:25,0:25:70.61:0,71,414	1/1:0,25:25:72.23:934,72,0	0/0:15,0:15:31.05:0,31,192	0/0:21,0:21:57.18:0,57,865	0/0:26,0:26:78.27:0,78,1247	0/0:19,0:19:57.11:0,57,853	0/0:25,0:25:48.29:0,48,412	0/0:24,0:24:36.67:0,37,324	0/0:16,0:16:47.02:0,47,293	0/0:28,0:28:75.81:0,76,439	0/0:25,0:25:75.24:0,75,1176	0/0:33,0:33:99:0,99,1553	0/0:9,0:9:27.09:0,27,432
chr10	42121195	.	GA	G	4749.82	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=11.300;DP=694;FS=2.682;HRun=10;HaplotypeScore=67.4856;InbreedingCoeff=0.9996;MQ=86.31;MQ0=0;MQRankSum=-0.459;QD=20.74;ReadPosRankSum=1.673;VQSLOD=5.9344;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,18:19:47.98:417,48,0	0/0:10,0:10:27.07:0,27,299	0/0:26,0:25:53.95:0,54,548	0/0:28,0:28:34.69:0,35,559	0/0:45,1:46:94.26:0,94,1261	0/0:20,0:21:62.99:0,63,668	0/0:15,0:15:36.10:0,36,398	1/1:6,33:39:98.95:856,99,0	0/0:22,0:22:60.16:0,60,663	0/0:44,1:45:82.23:0,82,1128	0/0:32,1:33:70.02:0,70,975	0/0:19,0:19:48.13:0,48,531	0/0:26,1:27:49.15:0,49,770	0/0:25,0:25:69.17:0,69,754	0/0:29,0:30:71.24:0,71,816	0/0:15,0:15:42.07:0,42,451	1/1:1,14:15:38.99:339,39,0	0/0:11,0:11:30.08:0,30,331	1/1:5,15:20:44.97:391,45,0	1/1:7,36:43:71.78:852,72,0	1/1:3,16:19:44.99:391,45,0	0/0:29,0:29:72.15:0,72,766	0/0:24,0:24:60.16:0,60,664	0/0:12,0:12:33.09:0,33,365	0/0:23,1:25:36.93:0,37,608	1/1:4,21:25:32.81:514,33,0	1/1:6,30:36:59.51:679,60,0	1/1:1,12:13:35.99:313,36,0
chr10	42121834	.	A	ATGT	11585.89	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=14.341;DP=648;FS=0.323;HRun=0;HaplotypeScore=100.4411;InbreedingCoeff=0.9991;MQ=83.96;MQ0=0;MQRankSum=-5.041;QD=59.41;ReadPosRankSum=2.759;VQSLOD=6.2808;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:66.21:0,66,1030	0/0:8,0:8:24.08:0,24,400	0/0:21,0:21:60.20:0,60,975	0/0:20,0:20:42.18:0,42,793	1/1:5,21:26:63.17:1358,63,0	0/0:30,0:30:81.28:0,81,1346	0/0:22,0:22:54.18:0,54,896	0/0:21,0:21:54.18:0,54,897	1/1:3,18:22:57.20:1290,57,0	1/1:2,36:38:99:2402,114,0	1/1:2,25:28:75.17:1602,75,0	0/0:21,0:21:60.18:0,60,946	0/0:18,0:18:54.14:0,54,846	0/0:22,0:22:60.19:0,60,959	1/1:2,25:26:69.24:1563,69,0	1/1:2,23:25:69.24:1551,69,0	0/0:19,0:19:51.17:0,51,846	1/1:0,8:8:24.08:544,24,0	0/0:23,0:23:60.20:0,60,994	0/0:33,0:33:99:0,99,1599	0/0:22,0:22:60.21:0,60,1000	0/0:22,0:22:60.19:0,60,972	0/0:28,0:28:78.27:0,78,1299	0/0:17,0:17:51.17:0,51,849	1/1:1,20:21:57.20:1276,57,0	0/0:38,0:38:99:0,105,1672	0/0:36,0:36:99:0,105,1672	0/0:9,0:9:27.09:0,27,450
chr10	42122331	.	G	GA	4797.75	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-12.110;DP=532;FS=2.144;HRun=7;HaplotypeScore=59.5164;InbreedingCoeff=0.9960;MQ=85.40;MQ0=0;MQRankSum=-4.111;QD=29.62;ReadPosRankSum=0.135;VQSLOD=5.2727;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,29:32:72.22:870,72,0	0/0:6,0:6:15.02:0,15,145	0/0:18,0:18:44.78:0,45,391	0/0:22,0:22:32.96:0,33,303	0/0:18,0:18:51.08:0,51,492	0/0:17,0:17:45.02:0,45,425	0/0:17,0:17:45.03:0,45,423	1/1:6,21:27:60.16:701,60,0	0/0:12,0:12:30.02:0,30,282	0/0:24,0:24:66.10:0,66,636	0/0:27,0:27:72.11:0,72,695	0/0:19,0:19:51:0,51,480	0/0:14,0:14:36.03:0,36,341	0/0:18,0:18:48.07:0,48,459	0/0:24,0:23:69.06:0,69,655	0/0:21,0:21:60.02:0,60,563	0/0:26,0:26:37.10:0,37,226	0/0:7,0:7:20.90:0,21,172	1/1:1,20:21:60.16:703,60,0	1/1:2,16:18:48:528,48,0	1/1:2,12:15:32.97:377,33,0	0/0:15,0:15:45.07:0,45,434	0/0:19,0:19:45.07:0,45,433	0/0:31,0:30:90.11:0,90,858	0/0:15,0:15:39.06:0,39,376	1/1:1,20:21:60.17:714,60,0	1/1:1,19:20:51.16:616,51,0	1/1:0,8:8:24.07:290,24,0
chr10	42122418	.	T	TCA	687.16	PASS	AB=0.958;AC=30;AF=0.577;AN=52;BaseQRankSum=3.074;DP=467;FS=5.817;HRun=0;HaplotypeScore=98.9725;InbreedingCoeff=0.4208;MQ=59.16;MQ0=9;MQRankSum=0.736;QD=2.24;ReadPosRankSum=-0.497;VQSLOD=1.6572;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:29:11.95:100,12,0	0/0:13,0:13:26.59:0,27,228	./.	./.	1/1:13,0:12:2.99:24,3,0	1/1:12,4:18:2.80:43,3,0	0/1:11,3:15:4.62:38,0,5	0/1:12,0:11:0:0,0,0	1/1:13,0:13:0.47:1,0,0	1/1:29,0:27:15.34:129,15,0	1/1:26,0:23:5.93:41,6,0	0/0:8,0:11:8.84:0,9,71	1/1:15,0:15:3:26,3,0	0/0:10,0:10:3.01:0,3,32	1/1:16,0:14:5.09:19,5,0	1/1:17,0:15:2.66:11,3,0	1/1:28,0:29:23.81:185,24,0	1/1:9,0:9:2.19:13,2,0	0/0:15,0:14:3:0,3,32	0/0:9,0:11:1.72:0,2,79	0/0:14,0:13:9.44:0,9,72	1/1:12,0:12:3:25,3,0	0/1:13,0:13:18.23:18,0,26	0/0:39,0:40:41.53:0,42,353	1/1:27,0:24:17.99:167,18,0	0/0:15,0:15:2.28:0,2,24	0/1:13,0:14:5.12:5,0,66	0/0:7,0:7:10.93:0,11,126
chr10	42122935	.	ACTAC	A	6530.89	PASS	AB=0.926;AC=17;AF=0.304;AN=56;BaseQRankSum=14.664;DP=594;FS=8.934;HRun=0;HaplotypeScore=105.1351;InbreedingCoeff=0.9064;MQ=91.79;MQ0=1;MQRankSum=-3.425;QD=38.87;ReadPosRankSum=2.315;VQSLOD=5.0097;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,111,2801	0/0:11,0:11:33.11:0,33,871	0/0:26,0:26:72.25:0,72,1739	0/0:27,0:27:72.16:0,72,1549	1/1:3,22:25:60.05:976,60,0	0/0:21,0:21:57.18:0,57,1440	0/0:12,0:12:36.11:0,36,884	0/0:33,0:33:78.27:0,78,1995	1/1:2,16:18:45.15:828,45,0	1/1:1,27:27:75.23:1314,75,0	1/1:0,16:16:42.06:701,42,0	0/0:17,0:17:51.15:0,51,1226	0/0:16,0:16:45.15:0,45,1174	0/0:20,0:20:60.21:0,60,1569	1/1:0,13:13:30.10:552,30,0	1/1:0,14:14:36.12:662,36,0	0/0:21,0:21:63.20:0,63,1570	1/1:0,14:14:39.13:717,39,0	0/0:20,0:20:57.20:0,57,1426	0/0:30,0:30:84.29:0,84,2172	0/0:29,0:29:81.25:0,81,2058	0/0:19,0:19:57.20:0,57,1497	0/0:19,0:19:57.07:0,57,1224	0/0:21,0:21:63.22:0,63,1663	1/1:0,15:15:45.08:753,45,0	0/1:23,2:25:27.46:27,0,1633	0/0:43,0:43:99:0,117,2972	0/0:3,0:3:9.03:0,9,204
chr10	42123143	.	G	GTT	6438.01	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-13.852;DP=572;FS=2.063;HRun=9;HaplotypeScore=84.0704;InbreedingCoeff=0.9766;MQ=80.71;MQ0=0;MQRankSum=-2.017;QD=36.37;ReadPosRankSum=1.934;VQSLOD=5.1984;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:48.11:0,48,510	0/0:7,0:7:21.05:0,21,224	0/0:16,0:16:24.22:0,24,279	0/0:15,0:15:10.86:0,11,154	1/1:4,28:33:81.05:1085,81,0	0/0:22,0:22:54.11:0,54,575	0/0:19,0:19:51.08:0,51,524	0/0:34,0:34:78.08:0,78,802	1/1:0,16:16:39.13:600,39,0	1/1:8,30:39:89.73:1281,90,0	1/1:0,24:25:72.24:1108,72,0	0/0:23,0:23:57.10:0,57,599	0/0:13,0:13:30.05:0,30,311	0/0:17,0:17:48.12:0,48,511	1/1:0,17:17:42.14:646,42,0	1/1:2,6:9:20.56:286,21,0	0/0:25,0:25:66.10:0,66,683	1/1:4,3:7:9.03:139,9,0	0/0:15,0:15:39.09:0,39,414	0/0:26,0:26:63.12:0,63,660	0/0:23,0:23:63.12:0,63,659	0/0:36,0:36:90.19:0,90,950	0/0:17,0:17:45.11:0,45,479	0/0:18,0:17:48.10:0,48,511	1/1:0,30:30:84.29:1293,84,0	0/0:21,0:21:57.14:0,57,607	0/0:23,0:23:66.13:0,66,693	0/0:5,0:5:12.03:0,12,128
chr10	42123341	.	GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGGT	G	461.63	PASS	AB=0.949;AC=8;AF=0.143;AN=56;BaseQRankSum=3.192;DP=402;FS=24.721;HRun=0;HaplotypeScore=203.0549;InbreedingCoeff=0.0039;MQ=45.43;MQ0=44;MQRankSum=3.573;QD=4.09;ReadPosRankSum=-3.249;VQSLOD=0.3934;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:26:58.44:0,58,3512	0/0:5,0:4:4.83:0,5,202	0/0:7,0:1:3.01:0,3,45	0/0:12,0:1:2.90:0,3,16	0/1:17,0:14:38.07:38,0,1188	0/0:15,0:15:20.54:0,21,1112	0/0:18,0:18:30.08:0,30,1324	0/0:15,0:15:42.14:0,42,2035	0/1:16,0:14:93.39:93,0,354	0/1:23,0:19:99:125,0,2751	0/0:10,0:10:15.05:0,15,1272	0/0:15,0:14:14.07:0,14,707	0/0:15,0:13:11.75:0,12,1061	0/0:19,0:18:34.44:0,34,1302	0/1:19,0:17:20.30:20,0,843	0/1:9,7:14:99:245,0,117	1/1:9,0:8:5.50:62,6,0	0/1:13,0:12:9.54:10,0,818	0/0:10,0:10:29.59:0,30,1896	0/0:9,0:8:9.03:0,9,835	0/0:17,0:15:30.10:0,30,1204	0/0:11,0:10:12.04:0,12,396	0/0:24,0:22:21.92:0,22,1341	0/0:18,0:18:35.11:0,35,2137	0/0:8,0:6:3.01:0,3,167	0/0:11,0:6:18.06:0,18,897	0/0:10,0:10:21.07:0,21,814	0/0:10,0:4:12.04:0,12,1003
chr10	42123370	.	AGGTG	A	3078.79	PASS	AB=0.875;AC=30;AF=0.536;AN=56;BaseQRankSum=2.076;DP=504;FS=11.063;HRun=0;HaplotypeScore=112.1028;InbreedingCoeff=0.6736;MQ=61.60;MQ0=17;MQRankSum=2.748;QD=10.92;ReadPosRankSum=5.660;VQSLOD=1.7356;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:34:88.66:0,89,2013	0/0:9,0:9:15.05:0,15,359	0/0:22,0:10:23.10:0,23,431	0/0:20,0:9:27.09:0,27,610	1/1:21,0:21:22.04:232,22,0	1/1:15,0:15:41.84:334,42,0	1/1:20,0:20:56.61:454,57,0	0/0:26,0:26:72.60:0,73,1745	1/1:13,0:12:6.42:116,6,0	1/1:29,0:29:34.61:361,35,0	0/1:12,0:12:27.98:30,0,28	1/1:15,0:15:38.51:338,39,0	1/1:14,0:13:35.25:288,35,0	1/1:27,0:27:51.48:489,51,0	0/1:19,0:18:23.96:123,0,24	0/1:11,0:11:9.35:19,0,9	1/1:9,0:8:1.20:19,1,0	1/1:10,0:10:19.32:115,19,0	0/0:20,0:20:56.62:0,57,1145	0/0:16,0:16:34.65:0,35,700	0/0:31,0:30:75.26:0,75,1776	1/1:1,0:17:2.92:17,3,0	0/1:0,17:17:0.04:0,0,1	1/1:18,0:18:41.51:334,42,0	1/1:14,0:14:2.88:15,3,0	0/0:14,0:11:33.08:0,33,713	0/0:14,0:14:36.12:0,36,849	0/0:14,0:14:39.13:0,39,899
chr10	42123371	.	GGT	G	2552.67	PASS	AB=1.000;AC=25;AF=0.463;AN=54;BaseQRankSum=-3.054;DP=497;FS=9.144;HRun=0;HaplotypeScore=99.8256;InbreedingCoeff=0.6225;MQ=62.01;MQ0=15;MQRankSum=3.018;QD=11.29;ReadPosRankSum=2.517;VQSLOD=2.9858;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:34:87.77:0,88,1336	0/0:9,0:9:15.05:0,15,240	0/0:22,0:10:12.57:0,13,295	0/0:20,0:9:26.98:0,27,387	1/1:20,1:21:45.15:625,45,0	1/1:15,0:15:2.19:5,2,0	1/1:20,0:20:4.53:10,5,0	0/0:26,0:26:66.23:0,66,1130	1/1:12,0:12:24.08:337,24,0	1/1:4,24:28:68.96:904,69,0	1/1:1,11:12:6.02:67,6,0	0/1:15,0:15:6.03:22,0,6	1/1:14,0:13:4.19:13,4,0	0/1:27,0:27:3.40:3,0,15	0/1:19,0:18:4.73:350,0,5	1/1:11,0:11:2.29:28,2,0	1/1:2,7:8:2.97:39,3,0	1/1:9,0:9:21.07:287,21,0	0/0:19,0:19:50.63:0,51,742	0/0:14,0:15:30.08:0,30,436	0/0:31,0:30:75.25:0,75,1175	./.	0/0:17,0:17:0.40:0,0,1	0/0:18,0:18:1.21:0,1,3	1/1:1,13:14:3.01:42,3,0	0/0:12,0:10:30.08:0,30,457	0/0:14,0:14:36.12:0,36,566	0/0:14,0:14:39.13:0,39,601
chr10	42123727	.	GAA	G	3670.44	PASS	AB=0.971;AC=18;AF=0.321;AN=56;BaseQRankSum=12.582;DP=617;FS=5.324;HRun=11;HaplotypeScore=123.8122;InbreedingCoeff=0.8824;MQ=68.36;MQ0=1;MQRankSum=-2.354;QD=17.56;ReadPosRankSum=1.460;VQSLOD=2.3959;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:75.23:0,75,1111	0/0:12,0:14:33.82:0,34,413	0/1:15,1:14:2.89:3,0,221	0/1:14,0:13:4.46:4,0,283	1/1:5,21:26:57.01:585,57,0	0/0:25,0:25:66.22:0,66,997	0/0:19,0:19:51.14:0,51,707	0/0:25,0:27:54.13:0,54,702	1/1:2,19:21:45.09:477,45,0	1/1:12,18:30:53.66:588,54,0	1/1:7,9:16:27.10:246,27,0	0/0:4,0:22:53.88:0,54,501	0/0:7,0:30:65.94:0,66,633	0/0:7,0:25:56.94:0,57,565	1/1:8,17:25:29.49:371,29,0	1/1:0,14:16:35.78:417,36,0	0/0:6,0:37:68.85:0,69,288	1/1:3,21:24:45.08:478,45,0	0/0:16,0:19:36.58:0,37,512	0/0:26,0:29:80.21:0,80,1096	0/0:8,0:9:27.07:0,27,377	0/0:2,0:17:39.03:0,39,366	0/0:4,0:21:48.08:0,48,474	0/0:2,0:21:63.01:0,63,584	1/1:2,18:21:42.05:501,42,0	0/0:24,0:26:69.93:0,70,933	0/0:28,0:30:80.56:0,81,1099	0/0:9,0:9:21.04:0,21,280
chr10	42123937	.	GA	G	7658.63	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=17.843;DP=700;FS=8.555;HRun=1;HaplotypeScore=80.6631;InbreedingCoeff=0.9902;MQ=85.40;MQ0=0;MQRankSum=-4.053;QD=39.07;ReadPosRankSum=3.534;VQSLOD=5.2912;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,166,2562	0/0:13,0:13:39.13:0,39,621	0/0:26,0:26:78.04:0,78,1102	0/0:24,0:24:69.17:0,69,1069	1/1:0,26:26:75.25:1048,75,0	0/0:20,0:20:60.17:0,60,911	0/0:17,0:17:45.14:0,45,696	0/0:30,0:30:87.27:0,87,1310	1/1:0,26:26:66.22:907,66,0	1/1:0,35:35:99:1467,105,0	1/1:0,15:15:45.15:629,45,0	0/0:24,0:24:72.21:0,72,1080	0/0:30,0:30:90.31:0,90,1436	0/0:23,0:23:69.22:0,69,1073	1/1:0,27:27:81.27:1133,81,0	1/1:0,24:24:66.22:923,66,0	0/0:20,0:20:60.20:0,60,950	1/1:0,13:13:30.10:419,30,0	0/0:23,0:23:69.23:0,69,1095	0/0:28,0:28:84.29:0,84,1343	0/0:27,0:27:81.25:0,81,1245	0/0:25,0:25:75.26:0,75,1199	0/0:29,0:29:84.29:0,84,1329	0/0:24,0:24:72.23:0,72,1128	1/1:0,30:30:81.27:1133,81,0	0/0:31,1:32:54.36:0,54,1445	0/0:31,0:30:93.27:0,93,1436	0/0:3,0:3:9.03:0,9,144
chr10	42124139	.	AT	A	18387.49	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-0.540;DP=613;FS=8.800;HRun=2;HaplotypeScore=75.8084;InbreedingCoeff=0.9856;MQ=100.38;MQ0=0;MQRankSum=-12.548;QD=34.31;ReadPosRankSum=6.371;VQSLOD=4.4013;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,37:37:96.31:1246,96,0	0/0:12,0:12:36.11:0,36,520	0/0:36,0:36:99:0,102,1419	0/0:29,0:29:84.20:0,84,1142	1/1:0,13:13:36.07:448,36,0	1/1:0,21:21:48.16:623,48,0	1/1:0,27:27:75.24:974,75,0	1/1:1,22:23:66.20:842,66,0	1/1:0,28:28:78.25:1009,78,0	1/1:1,14:15:42.13:535,42,0	1/1:2,9:11:24.08:311,24,0	1/1:1,17:18:48.16:623,48,0	1/1:1,24:25:63.20:817,63,0	1/1:1,34:35:90.29:1168,90,0	1/1:0,21:21:63.20:818,63,0	1/1:0,29:29:81.26:1052,81,0	1/1:0,47:47:99:1792,138,0	1/1:0,10:10:27.09:351,27,0	1/1:1,13:14:39.13:506,39,0	1/1:0,15:15:39.06:483,39,0	1/1:1,31:32:84.27:1090,84,0	1/1:0,15:15:23.66:311,24,0	1/1:1,7:8:21.07:272,21,0	1/1:1,33:34:87.28:1129,87,0	1/1:0,17:17:45.15:584,45,0	1/1:0,12:12:36.12:467,36,0	1/1:4,21:25:60.19:779,60,0	1/1:0,4:4:12.04:156,12,0
chr10	42125309	.	A	AT	4698.32	PASS	AB=0.611;AC=15;AF=0.268;AN=56;BaseQRankSum=-8.396;DP=715;FS=6.017;HRun=9;HaplotypeScore=77.9751;InbreedingCoeff=0.9059;MQ=84.06;MQ0=0;MQRankSum=0.275;QD=25.81;ReadPosRankSum=2.544;VQSLOD=5.5306;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,129,1111	0/0:13,0:13:26.99:0,27,234	0/0:26,0:27:58.76:0,59,466	0/0:21,0:22:50.93:0,51,434	1/1:4,26:31:72.19:797,72,0	0/0:26,0:26:71.98:0,72,625	0/0:17,0:17:35.98:0,36,313	0/0:25,0:26:58.98:0,59,497	1/1:3,16:19:41.90:460,42,0	1/1:3,30:33:87.22:953,87,0	1/1:2,13:15:42.11:458,42,0	0/0:20,0:20:28.84:0,29,417	0/0:30,0:30:68.96:0,69,599	0/0:26,0:26:68.97:0,69,599	1/1:2,24:26:66.18:730,66,0	1/1:4,18:22:28.10:538,28,0	0/0:35,0:35:86.97:0,87,755	0/1:4,7:11:25.05:198,0,25	0/0:22,0:22:50.90:0,51,433	0/0:33,0:33:68.98:0,69,599	0/0:25,0:25:65.98:0,66,573	0/0:22,0:22:59.97:0,60,521	0/0:22,0:22:50.95:0,51,439	0/0:36,0:36:89.97:0,90,781	1/1:4,21:25:51.14:564,51,0	0/0:34,1:35:41.79:0,42,592	0/0:34,0:34:64.81:0,65,730	0/0:11,0:11:14.73:0,15,130
chr10	42125460	.	A	ACATAAAGATAATTT	76234.95	PASS	AB=0.946;AC=35;AF=0.625;AN=56;BaseQRankSum=-5.133;DP=750;FS=22.667;HRun=0;HaplotypeScore=246.3259;InbreedingCoeff=0.9237;MQ=81.69;MQ0=0;MQRankSum=-20.928;QD=150.96;ReadPosRankSum=2.306;VQSLOD=3.4730;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:90.31:0,90,3507	0/0:13,0:13:36.12:0,36,1421	0/0:30,0:30:87.28:0,87,3125	0/0:27,0:27:72.17:0,72,2599	1/1:14,23:38:99:6011,102,0	1/1:13,14:28:75.26:4613,75,0	1/1:8,8:18:48.16:2939,48,0	0/0:36,0:35:99:0,99,3414	1/1:14,13:29:78.27:4553,78,0	1/1:14,19:35:99:6454,99,0	1/1:11,20:33:84.29:5248,84,0	1/1:13,7:23:54.19:3546,54,0	1/1:17,13:33:87.30:5300,87,0	1/1:12,17:33:84.29:5279,84,0	1/1:9,8:21:48.16:3041,48,0	1/1:8,14:23:66.23:4332,66,0	1/1:11,5:16:36.12:1948,36,0	1/1:10,4:15:35.67:1775,36,0	0/0:22,0:22:57.20:0,57,2022	0/0:26,0:26:72.25:0,72,2868	0/0:12,0:12:36.12:0,36,1476	1/1:13,20:34:99:6097,99,0	1/1:12,18:32:91.25:5539,91,0	1/1:10,6:17:42.14:2637,42,0	1/1:20,19:42:99:6597,111,0	0/1:33,2:35:99:325,0,3583	0/0:26,0:26:78.27:0,78,3056	0/0:20,0:20:60.18:0,60,2276
chr10	42127778	.	C	CA	12315.74	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=10.708;DP=696;FS=0.000;HRun=6;HaplotypeScore=96.8110;InbreedingCoeff=0.9617;MQ=55.42;MQ0=22;MQRankSum=5.848;QD=31.26;ReadPosRankSum=2.514;VQSLOD=4.8033;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,126,1285	0/0:10,0:10:30.07:0,30,306	0/0:16,0:4:3.01:0,3,31	0/0:21,0:13:7.30:0,7,105	1/1:4,34:38:93.21:1134,93,0	1/1:3,21:24:57.18:717,57,0	1/1:6,19:25:45.14:566,45,0	0/0:19,0:18:48.08:0,48,482	1/1:4,15:19:42.13:524,42,0	1/1:4,30:34:90.29:1132,90,0	1/1:1,28:29:81.22:1001,81,0	1/1:3,17:20:48.15:604,48,0	1/1:0,21:21:60.19:755,60,0	1/1:1,17:18:51.16:641,51,0	1/1:3,26:28:69.22:868,69,0	1/1:1,16:17:39.12:491,39,0	0/0:37,0:37:96.18:0,96,970	1/1:1,17:18:45.14:566,45,0	0/0:26,0:25:75.11:0,75,743	0/0:36,0:36:99:0,102,1040	0/0:29,0:28:81.15:0,81,816	1/1:1,24:25:66.21:830,66,0	1/1:5,25:30:75.24:941,75,0	1/1:0,22:22:60.19:755,60,0	1/1:2,23:25:63.20:792,63,0	0/0:30,0:30:81:0,81,802	0/0:26,0:26:66.14:0,66,673	0/0:5,0:5:15.03:0,15,153
chr10	42127893	.	CA	C	13756.07	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=20.446;DP=679;FS=0.580;HRun=2;HaplotypeScore=129.6740;InbreedingCoeff=0.9841;MQ=72.89;MQ0=0;MQRankSum=-3.951;QD=38.32;ReadPosRankSum=3.525;VQSLOD=4.3544;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,120,1893	0/0:10,0:10:30.05:0,30,429	0/0:27,0:27:78.24:0,78,1199	0/0:34,0:32:95.90:0,96,1405	1/1:0,16:16:42.13:550,42,0	1/1:0,19:19:57.19:796,57,0	1/1:0,30:30:78.26:1090,78,0	0/0:36,0:36:99:0,105,1639	1/1:0,24:24:66.22:922,66,0	1/1:0,26:26:78.26:1084,78,0	1/1:0,19:19:45.15:614,45,0	1/1:0,22:22:63.21:880,63,0	1/1:0,29:29:84.28:1167,84,0	1/1:0,19:19:57.19:796,57,0	1/1:0,28:28:78.26:1080,78,0	1/1:0,22:22:60.20:839,60,0	0/0:28,2:30:6.43:0,6,1256	1/1:2,16:18:37.63:674,38,0	0/0:15,0:15:45.13:0,45,677	0/0:37,0:37:99:0,111,1751	0/0:33,0:33:99:0,99,1537	1/1:0,17:17:48.16:668,48,0	1/1:0,19:19:48.16:669,48,0	1/1:0,31:31:87.29:1216,87,0	1/1:0,20:20:51.17:711,51,0	0/0:25,0:25:75.24:0,75,1175	0/0:28,0:28:84.29:0,84,1332	0/0:5,0:5:15.05:0,15,237
chr10	42128214	.	A	ACTGTTC	31665.23	PASS	AB=0.958;AC=33;AF=0.589;AN=56;BaseQRankSum=12.980;DP=678;FS=0.288;HRun=0;HaplotypeScore=172.4717;InbreedingCoeff=0.9254;MQ=67.72;MQ0=0;MQRankSum=-20.582;QD=83.11;ReadPosRankSum=-2.211;VQSLOD=5.2918;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,157,3682	0/0:11,0:11:33.11:0,33,760	0/0:16,0:16:48.15:0,48,1019	0/0:22,0:22:63.18:0,63,1337	1/1:6,6:12:21.07:488,21,0	1/1:6,20:26:75.26:2550,75,0	1/1:17,16:37:87.30:2852,87,0	0/0:34,0:34:93.29:0,93,2090	1/1:6,18:24:66.22:2174,66,0	1/1:9,14:23:69.23:2319,69,0	1/1:6,9:15:33.10:980,33,0	1/1:8,14:22:60.21:2030,60,0	1/1:4,22:26:78.27:2729,78,0	1/1:10,19:29:78.27:2573,78,0	1/1:10,15:25:69.24:2319,69,0	1/1:7,21:28:81.28:2848,81,0	0/0:32,0:32:96.33:0,96,2285	1/1:7,4:11:33.03:881,33,0	0/0:24,0:24:63.17:0,63,1457	0/0:29,0:29:78.25:0,78,1826	0/0:49,0:49:99:0,141,3343	1/1:5,17:22:63.22:2173,63,0	1/1:4,10:14:39.13:1218,39,0	1/1:5,14:19:40.08:1400,40,0	1/1:10,15:25:63.22:2090,63,0	0/1:22,1:23:41.77:42,0,1398	0/0:16,0:16:48.14:0,48,1065	0/0:9,0:9:27.09:0,27,649
chr10	42128301	.	A	AC	17251.94	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=0.459;DP=758;FS=2.674;HRun=1;HaplotypeScore=102.6486;InbreedingCoeff=0.9999;MQ=78.04;MQ0=0;MQRankSum=-5.866;QD=39.75;ReadPosRankSum=4.322;VQSLOD=5.0082;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,129,1638	0/0:14,0:14:39.10:0,39,487	0/0:29,0:29:75.23:0,75,956	0/0:20,0:20:57.17:0,57,723	1/1:4,30:34:84.28:1259,84,0	1/1:0,21:21:54.05:755,54,0	1/1:1,27:28:66.11:937,66,0	0/0:39,0:39:99:0,114,1455	1/1:2,26:28:78.26:1167,78,0	1/1:0,32:32:96.30:1407,96,0	1/1:2,30:32:90.13:1278,90,0	1/1:2,25:27:75.12:1070,75,0	1/1:1,22:23:69.23:1021,69,0	1/1:3,21:24:66.11:922,66,0	1/1:4,26:30:81.21:1175,81,0	1/1:2,31:33:93.31:1391,93,0	0/0:24,0:24:72.23:0,72,935	1/1:1,20:21:57.19:841,57,0	0/0:20,0:19:54.12:0,54,648	0/0:38,0:38:99:0,114,1429	0/0:35,0:35:99:0,105,1340	1/1:1,28:29:75.25:1124,75,0	1/1:1,21:22:57.19:854,57,0	1/1:1,23:24:69.17:1006,69,0	1/1:2,24:25:72.18:1045,72,0	0/0:25,0:25:72.23:0,72,935	0/0:27,0:27:81.26:0,81,1052	0/0:10,0:10:30.10:0,30,389
chr10	42129834	.	AT	A	8497.43	PASS	AB=0.531;AC=15;AF=0.268;AN=56;BaseQRankSum=6.057;DP=607;FS=4.104;HRun=2;HaplotypeScore=66.4119;InbreedingCoeff=0.8979;MQ=88.69;MQ0=0;MQRankSum=-1.661;QD=39.34;ReadPosRankSum=-1.029;VQSLOD=5.0236;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:0,46:46:99:1804,129,0	0/0:8,0:8:24.08:0,24,384	0/0:18,0:18:38.46:0,38,719	0/0:25,0:25:72.15:0,72,1017	0/0:22,0:22:66.21:0,66,1030	0/0:22,0:22:66.23:0,66,1055	0/0:21,0:21:63.20:0,63,977	1/1:0,42:42:99:1756,126,0	0/0:18,0:18:51.16:0,51,791	0/0:24,0:24:72.25:0,72,1149	0/0:21,0:21:63.21:0,63,1007	0/0:21,0:21:63.21:0,63,1002	0/0:23,0:23:69.20:0,69,1051	0/0:26,0:26:78.27:0,78,1242	0/0:21,0:21:63.21:0,63,1005	0/0:14,0:14:42.14:0,42,671	0/0:31,0:31:93.30:0,93,1462	0/0:14,0:14:42.10:0,42,638	1/1:0,21:21:63.21:881,63,0	1/1:0,22:22:60.20:839,60,0	1/1:0,25:25:66.22:923,66,0	0/0:16,0:16:48.16:0,48,762	0/0:10,0:10:30.10:0,30,473	0/0:17,0:17:51.17:0,51,808	0/0:19,0:19:57.19:0,57,911	0/1:2,15:17:44.81:578,0,45	1/1:0,40:40:99:1589,114,0	1/1:0,3:3:9.03:126,9,0
chr10	42131759	.	A	AT	6200.27	PASS	AB=0.929;AC=17;AF=0.304;AN=56;BaseQRankSum=-8.622;DP=666;FS=6.467;HRun=4;HaplotypeScore=85.9581;InbreedingCoeff=0.9384;MQ=89.86;MQ0=0;MQRankSum=-5.308;QD=30.85;ReadPosRankSum=1.306;VQSLOD=5.1221;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,114,1278	0/0:10,0:10:30.09:0,30,340	0/0:27,0:27:78.21:0,78,870	0/0:28,0:28:73.41:0,73,800	1/1:0,23:23:69.19:923,69,0	0/0:27,0:27:81.23:0,81,919	0/0:22,0:22:66.16:0,66,735	0/0:27,0:27:69.20:0,69,783	1/1:2,22:24:63.21:862,63,0	1/1:0,26:26:78.24:1048,78,0	1/1:1,19:20:45.10:573,45,0	0/0:26,0:26:75.21:0,75,851	0/0:24,0:24:66.19:0,66,748	0/0:17,0:17:51.15:0,51,578	1/1:2,24:26:57.19:780,57,0	1/1:1,23:24:66.22:903,66,0	0/0:17,0:17:30.04:0,30,290	1/1:0,8:8:21.07:287,21,0	0/0:14,0:14:33.09:0,33,374	0/0:34,0:34:99:0,99,1123	0/0:23,0:23:66.19:0,66,748	0/0:23,0:23:69.20:0,69,783	0/0:24,0:24:63.18:0,63,714	0/0:32,0:32:90.24:0,90,1010	1/1:1,23:24:60.20:821,60,0	0/1:24,2:26:3.92:4,0,705	0/0:30,0:30:78.22:0,78,885	0/0:18,0:18:42.11:0,42,475
chr10	42131766	.	TAGAGATCCAGTG	T	603.20	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.861;DP=675;FS=3.524;HRun=0;HaplotypeScore=258.3707;InbreedingCoeff=0.9872;MQ=91.24;MQ0=0;MQRankSum=-4.110;QD=30.16;ReadPosRankSum=0.150;VQSLOD=2.3213;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,114,7136	0/0:10,0:10:30.10:0,30,1679	0/0:27,0:27:78.27:0,78,4045	0/0:31,0:31:90.31:0,90,4483	0/0:24,0:24:72.25:0,72,4065	0/0:29,0:29:87.30:0,87,4331	0/0:22,0:22:66.21:0,66,3409	0/0:29,0:29:87.29:0,87,4877	0/0:24,0:24:69.24:0,69,4107	0/0:26,0:26:78.27:0,78,4733	0/0:21,0:21:54.19:0,54,3297	0/0:25,0:25:72.25:0,72,3649	0/0:25,0:25:72.25:0,72,3870	0/0:20,0:20:57.20:0,57,2720	0/0:25,0:25:63.22:0,63,3710	0/0:25,0:25:75.12:0,75,4282	1/1:3,17:20:18.06:694,18,0	0/0:8,0:8:21.07:0,21,1184	0/0:12,0:12:33.11:0,33,1804	0/0:34,0:34:99:0,102,6275	0/0:23,0:23:69.24:0,69,4316	0/0:27,0:27:81.26:0,81,4090	0/0:22,0:22:66.21:0,66,3335	0/0:31,0:31:90.31:0,90,4456	0/0:22,0:22:60.21:0,60,3332	0/0:27,0:27:81.28:0,81,5015	0/0:29,0:29:87.30:0,87,5196	0/0:16,0:16:48.16:0,48,2797
chr10	42133102	.	TTTTTTCTAGTGTGA	T	11125.84	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=14.355;DP=564;FS=21.189;HRun=0;HaplotypeScore=221.9603;InbreedingCoeff=0.9771;MQ=84.96;MQ0=0;MQRankSum=-14.414;QD=76.20;ReadPosRankSum=5.218;VQSLOD=2.7859;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:48.16:0,48,3282	0/0:11,0:11:33.11:0,33,2250	0/0:28,0:28:75.26:0,75,4119	0/0:13,0:13:29.69:0,30,1760	0/0:30,0:30:87.27:0,87,4793	1/1:2,24:26:57.20:2335,57,0	1/1:1,10:11:18.06:737,18,0	0/0:24,0:24:66.21:0,66,3600	0/0:15,0:15:42.14:0,42,2632	0/0:28,0:28:78.26:0,78,4818	0/0:27,0:27:75.24:0,75,4438	1/1:9,8:17:21.07:860,21,0	1/1:4,20:24:54.19:2115,54,0	1/1:6,22:28:63.22:2581,63,0	0/0:29,0:29:78.27:0,78,5259	0/0:28,0:28:75.24:0,75,4841	0/0:20,0:20:48.16:0,48,3124	0/0:9,0:9:24.08:0,24,1403	0/0:27,0:27:78.27:0,78,4798	0/0:31,0:31:84.29:0,84,5414	0/0:10,0:10:27.08:0,27,1539	1/1:3,10:13:21.03:757,21,0	1/1:4,13:17:36.12:1475,36,0	1/1:5,5:10:8.99:266,9,0	0/0:25,0:25:66.23:0,66,3586	0/0:16,0:16:45.15:0,45,2992	0/0:28,0:28:81.28:0,81,5243	0/0:3,0:3:9.03:0,9,620
chr10	42134177	.	TGATAGATA	T	3425.18	PASS	AC=12;AF=0.240;AN=50;BaseQRankSum=-7.722;DP=565;FS=2.051;HRun=0;HaplotypeScore=193.6385;InbreedingCoeff=0.8380;MQ=55.16;MQ0=1;MQRankSum=-5.355;QD=29.28;ReadPosRankSum=-1.041;VQSLOD=2.9065;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:20:20.97:0,21,207	0/0:10,0:10:21.07:0,21,787	./.	./.	0/0:38,0:38:54.15:0,54,1191	0/0:16,0:16:6.01:0,6,124	0/0:19,0:23:9.03:0,9,269	./.	0/0:22,0:22:48.16:0,48,1199	0/0:27,0:27:57.18:0,57,1376	0/0:32,0:32:57.15:0,57,1253	0/0:21,0:21:18.05:0,18,484	0/0:12,0:21:18.05:0,18,356	0/0:21,0:20:15.05:0,15,468	0/0:20,0:20:39.13:0,39,969	0/0:15,0:15:36.12:0,36,870	0/0:7,0:13:8.98:0,9,73	0/0:8,0:7:12.04:0,12,277	1/1:11,9:20:26.11:590,26,0	1/1:17,17:34:45.15:1034,45,0	1/1:11,5:16:3.01:75,3,0	0/0:17,0:23:6.02:0,6,148	0/0:26,0:30:10.80:0,11,254	0/0:12,0:12:5.05:0,5,103	0/0:28,0:28:51.16:0,51,1225	1/1:10,4:14:12.04:300,12,0	1/1:9,17:26:44.72:1126,45,0	1/1:7,0:7:12.04:300,12,0
chr10	42134184	.	TA	T	150.78	PASS	AB=0.867;AC=3;AF=0.054;AN=56;BaseQRankSum=9.562;DP=560;FS=4.163;HRun=1;HaplotypeScore=144.1490;InbreedingCoeff=-0.0618;MQ=54.89;MQ0=2;MQRankSum=-6.191;QD=2.60;ReadPosRankSum=-0.084;VQSLOD=-0.4560;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:19:25.54:0,26,293	0/0:11,0:11:33.11:0,33,520	0/0:16,0:14:42.11:0,42,602	0/0:7,0:4:12.04:0,12,184	0/0:36,0:36:99:0,105,1600	0/0:15,0:15:27.09:0,27,410	0/0:21,0:21:27.09:0,27,414	0/0:21,1:22:60.20:0,60,917	0/0:23,0:23:66.21:0,66,1024	0/0:27,0:27:81.28:0,81,1275	0/0:31,0:31:93.32:0,93,1449	0/0:24,0:24:32.13:0,32,435	0/0:21,0:21:27.09:0,27,420	0/0:19,0:18:27.09:0,27,409	0/0:21,0:21:57.17:0,57,875	0/0:16,0:16:48.15:0,48,739	0/0:12,0:12:18.79:0,19,234	0/0:9,0:8:21.07:0,21,329	0/1:18,0:18:69.21:69,0,336	0/1:34,0:34:99:105,0,695	0/0:14,0:14:11.26:0,11,180	0/0:21,0:21:21.07:0,21,325	0/0:34,0:34:39:0,39,595	0/0:16,0:16:14.64:0,15,195	0/0:28,0:28:81.25:0,81,1232	0/0:12,0:12:21.49:0,21,361	0/0:26,0:26:12.94:0,13,341	0/1:2,4:6:73.68:76,0,74
chr10	42134204	.	TA	T	7634.03	PASS	AB=0.788;AC=21;AF=0.375;AN=56;BaseQRankSum=8.290;DP=578;FS=5.207;HRun=1;HaplotypeScore=131.5122;InbreedingCoeff=0.5697;MQ=58.23;MQ0=4;MQRankSum=1.150;QD=25.62;ReadPosRankSum=8.547;VQSLOD=4.1985;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:23:34.47:0,34,373	0/0:10,0:10:30.10:0,30,474	0/0:20,0:15:14.94:0,15,548	0/0:15,0:10:24.51:0,25,300	1/1:0,30:30:87.29:1216,87,0	0/0:17,0:17:3.69:0,4,148	0/1:12,9:21:99:122,0,164	0/0:29,0:29:80.48:0,80,1171	1/1:0,29:29:81.27:1133,81,0	1/1:1,27:28:84.28:1171,84,0	1/1:0,30:30:84.28:1175,84,0	0/0:24,0:24:8.84:0,9,109	0/1:8,15:23:99:199,0,198	0/0:15,0:14:8.32:0,8,108	1/1:0,20:20:54.18:755,54,0	1/1:0,16:16:48.16:671,48,0	0/0:12,0:12:18.79:0,19,229	1/1:0,7:6:15.05:210,15,0	0/0:19,0:19:39.73:0,40,513	0/0:30,0:30:47.76:0,48,602	0/0:15,0:15:14.77:0,15,219	0/1:12,7:19:50.72:51,0,123	0/1:33,4:37:21.47:21,0,361	0/1:16,0:16:29.86:30,0,127	1/1:0,22:22:63.21:881,63,0	0/0:13,0:13:26.24:0,26,402	0/0:28,0:28:26.39:0,26,438	0/0:9,0:9:11.68:0,12,177
chr10	42134205	.	A	AGATAGATAGATAGAT	5187.33	PASS	AB=0.975;AC=21;AF=0.375;AN=56;BaseQRankSum=-5.457;DP=590;FS=2.873;HRun=0;HaplotypeScore=269.2975;InbreedingCoeff=0.0891;MQ=59.19;MQ0=4;MQRankSum=1.026;QD=14.25;ReadPosRankSum=-3.076;VQSLOD=2.7820;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:21:30.10:0,30,751	0/0:10,0:10:27.09:0,27,792	0/0:21,0:15:6.73:0,7,434	0/0:16,0:12:20.70:0,21,261	0/1:30,0:30:99:195,0,974	1/1:8,0:18:3.01:198,3,0	0/1:21,0:21:23.61:214,0,24	0/0:29,0:29:46.10:0,46,690	0/1:29,0:29:99:345,0,1047	0/1:27,0:28:99:186,0,1253	0/1:30,0:30:99:303,0,911	1/1:9,16:27:27.09:1792,27,0	1/1:24,0:24:20.94:293,21,0	1/1:8,7:16:15.05:1084,15,0	0/1:20,0:20:99:176,0,766	0/1:17,0:17:86.73:87,0,782	0/0:12,0:12:24.08:0,24,509	0/1:7,0:6:71.76:72,0,85	0/0:19,0:19:51.04:0,51,1038	0/0:30,0:30:60.20:0,60,1337	0/0:15,0:15:21.07:0,21,366	0/1:19,0:19:11.79:125,0,12	0/1:23,0:37:35.18:49,0,35	1/1:6,0:17:2.84:42,3,0	0/1:23,0:23:29.72:30,0,1226	0/0:14,0:14:30.09:0,30,559	0/0:28,0:28:69.17:0,69,1721	0/0:9,0:9:24.08:0,24,414
chr10	42134794	.	A	ACTTT	28077.72	PASS	AB=1.000;AC=35;AF=0.625;AN=56;BaseQRankSum=-14.753;DP=678;FS=7.087;HRun=0;HaplotypeScore=100.1460;InbreedingCoeff=0.9129;MQ=68.59;MQ0=1;MQRankSum=-1.887;QD=63.96;ReadPosRankSum=5.156;VQSLOD=6.9756;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,135,2431	0/0:8,0:8:24.08:0,24,441	0/1:10,0:9:16.54:17,0,106	0/0:12,0:12:7.80:0,8,260	1/1:2,26:28:78.27:1952,78,0	1/1:7,20:27:72.25:1819,72,0	1/1:1,25:27:69.24:1839,69,0	0/0:30,0:30:81.25:0,81,1420	1/1:3,23:27:69.24:1759,69,0	1/1:3,25:28:81.27:2081,81,0	1/1:3,25:29:78.20:1931,78,0	1/1:6,30:37:78.21:2017,78,0	1/1:3,20:24:57.07:1469,57,0	1/1:3,32:36:96.33:2435,96,0	1/1:1,31:36:99:2592,99,0	1/1:2,21:24:63.22:1660,63,0	1/1:1,19:20:54.19:1440,54,0	1/1:1,11:12:30.10:800,30,0	0/0:28,0:28:78.20:0,78,1341	0/0:19,0:19:54.19:0,54,1008	0/0:30,0:30:84.25:0,84,1494	1/1:3,13:17:39.13:993,39,0	1/1:1,14:17:33.11:877,33,0	1/1:1,23:24:57.20:1519,57,0	1/1:2,14:15:33.11:878,33,0	0/0:27,0:27:78.26:0,78,1426	0/0:26,0:26:69.24:0,69,1251	0/0:10,0:10:18.62:0,19,393
chr10	42135022	.	A	AAAACACAC	3055.69	PASS	AB=0.937;AC=20;AF=0.370;AN=54;BaseQRankSum=1.144;DP=321;FS=6.639;HRun=0;HaplotypeScore=86.6595;InbreedingCoeff=-0.0501;MQ=53.70;MQ0=11;MQRankSum=-4.096;QD=16.70;ReadPosRankSum=-1.534;VQSLOD=1.6848;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:24:75.34:108,0,75	./.	0/0:25,0:11:20.86:0,21,328	0/0:29,0:11:19.79:0,20,270	1/1:3,0:5:12.04:219,12,0	0/0:14,0:14:23.91:0,24,185	0/0:9,0:9:11.97:0,12,95	0/1:36,0:34:99:519,0,289	0/1:12,0:12:56.85:195,0,57	1/1:9,0:8:6.02:207,6,0	0/1:5,0:6:15.94:142,0,16	0/0:10,0:10:20.91:0,21,159	0/0:4,0:4:8.97:0,9,70	0/0:7,0:7:8.98:0,9,72	1/1:4,0:4:6.02:213,6,0	0/1:9,0:8:32.87:298,0,33	0/0:12,0:11:8.78:0,9,65	0/1:11,0:11:36.82:37,0,126	0/1:18,0:16:99:333,0,103	0/1:6,0:6:35.95:36,0,41	0/1:10,0:10:13.93:145,0,14	0/0:7,0:7:17.91:0,18,137	0/0:8,0:7:5.98:0,6,45	0/0:11,0:11:15.43:0,15,152	0/1:6,3:12:58.82:178,0,59	0/1:9,2:12:90.71:287,0,91	1/1:5,0:5:6.02:209,6,0	0/1:4,0:3:16.96:99,0,17
chr10	42135024	.	A	AACACAC	4483.64	PASS	AB=0.579;AC=37;AF=0.685;AN=54;BaseQRankSum=-1.071;DP=359;FS=0.000;HRun=0;HaplotypeScore=92.4833;InbreedingCoeff=0.5490;MQ=52.93;MQ0=14;MQRankSum=-3.714;QD=18.30;ReadPosRankSum=-2.203;VQSLOD=3.8405;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:28:15.04:240,15,0	./.	0/0:29,0:12:13.06:0,13,233	0/0:29,0:10:2.04:0,2,182	1/1:5,0:5:12.04:287,12,0	0/0:6,0:16:4.43:0,4,8	0/0:6,0:10:1.77:0,2,3	1/1:45,0:41:36.49:774,36,0	1/1:10,0:12:12.04:274,12,0	1/1:3,1:7:9.03:223,9,0	1/1:6,0:7:9.03:218,9,0	0/0:2,0:9:5.32:0,5,10	0/0:2,0:4:1.77:0,2,3	0/0:4,0:7:4.78:0,5,53	1/1:0,0:3:6.02:157,6,0	1/1:5,0:9:12.04:288,12,0	1/1:12,1:17:5.85:145,6,0	1/1:12,0:12:9.03:229,9,0	1/1:15,4:18:18.06:491,18,0	1/1:7,0:7:6.02:141,6,0	1/1:9,0:13:9.03:193,9,0	0/0:6,0:7:3.07:0,3,7	1/1:2,0:7:1.30:14,1,0	0/1:3,0:11:1.74:18,0,2	1/1:11,0:12:9.03:228,9,0	1/1:10,0:12:15.05:329,15,0	1/1:2,0:8:6.49:158,6,0	1/1:1,0:5:3.01:79,3,0
chr10	42135153	.	T	TTTA	356.62	PASS	AC=10;AF=0.417;AN=24;BaseQRankSum=-3.470;DP=177;FS=2.350;HRun=0;HaplotypeScore=32.5502;InbreedingCoeff=0.4937;MQ=68.05;MQ0=5;MQRankSum=-1.021;QD=5.17;ReadPosRankSum=-0.531;VQSLOD=1.5776;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:8:0:0,0,0	./.	./.	./.	0/0:6,0:8:8.93:0,9,63	0/0:4,0:5:5.95:0,6,42	./.	1/1:31,0:26:3.01:39,3,0	0/0:8,0:8:6.02:0,6,78	./.	0/0:3,0:5:2.98:0,3,21	1/1:3,0:3:6.01:82,6,0	./.	0/0:3,0:3:3.01:0,3,39	./.	./.	./.	0/0:9,0:9:2.98:0,3,21	1/1:8,1:9:3.01:57,3,0	./.	./.	./.	./.	./.	./.	./.	1/1:12,2:12:6.02:109,6,0	1/1:7,5:10:9.03:172,9,0
chr10	42136461	.	TTGTGTGTGTGTG	T	1600.88	PASS	AC=16;AF=0.308;AN=52;BaseQRankSum=6.242;DP=595;FS=25.905;HRun=0;HaplotypeScore=192.3271;InbreedingCoeff=0.7838;MQ=59.84;MQ0=16;MQRankSum=-6.038;QD=8.99;ReadPosRankSum=0.571;VQSLOD=0.9996;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:32:3.48:0,3,140	0/0:11,0:11:9.03:0,9,330	./.	./.	0/0:13,0:13:18.06:0,18,913	1/1:19,6:25:9.03:289,9,0	1/1:23,4:26:12.04:412,12,0	0/0:29,0:28:32.14:0,32,791	0/0:20,0:21:30.55:0,31,1099	0/0:27,0:26:48.13:0,48,1548	0/0:24,0:24:33.09:0,33,1085	1/1:15,1:15:3:103,3,0	1/1:18,4:21:6.02:206,6,0	1/1:15,4:17:6.01:150,6,0	0/0:18,0:18:18.06:0,18,862	0/0:8,0:11:15.05:0,15,607	0/0:26,0:28:29.89:0,30,490	0/0:11,0:11:11.07:0,11,333	0/0:20,0:20:12.31:0,12,335	0/0:15,0:16:18.06:0,18,796	0/0:23,0:26:36.12:0,36,1486	1/1:17,4:21:6.02:206,6,0	1/1:21,3:24:6.02:199,6,0	1/1:18,4:22:6.02:206,6,0	0/0:21,0:21:23.78:0,24,918	0/0:25,0:25:36.12:0,36,1218	0/0:24,0:24:37.01:0,37,1366	0/0:5,0:4:6.02:0,6,188
chr10	42138209	.	T	TA	7308.93	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-14.557;DP=699;FS=1.400;HRun=2;HaplotypeScore=64.7560;InbreedingCoeff=0.9608;MQ=78.06;MQ0=0;MQRankSum=-1.000;QD=38.27;ReadPosRankSum=0.606;VQSLOD=5.4067;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:57.15:0,57,691	0/0:14,0:14:39.12:0,39,483	0/0:19,0:19:57.18:0,57,699	0/0:20,0:20:38.71:0,39,627	1/1:3,30:33:90.22:1242,90,0	0/0:25,0:25:75.22:0,75,916	0/0:15,0:15:39.12:0,39,484	0/0:37,0:37:99:0,105,1280	1/1:0,27:27:66.22:951,66,0	1/1:3,24:27:72.21:1014,72,0	1/1:0,15:15:42.10:582,42,0	0/0:19,0:19:51.15:0,51,620	0/0:35,0:35:96.30:0,96,1190	0/0:28,0:28:84.26:0,84,1041	1/1:0,31:31:90.27:1274,90,0	1/1:0,23:23:63.21:907,63,0	0/0:31,0:31:66.37:0,66,1054	1/1:0,9:9:27.09:389,27,0	0/0:28,0:28:81.25:0,81,1004	0/0:42,0:42:99:0,120,1470	0/0:22,0:22:63.20:0,63,781	0/0:23,0:23:63.19:0,63,767	0/0:25,0:25:75.24:0,75,929	0/0:28,0:27:75.24:0,75,930	1/1:1,25:26:66.22:951,66,0	0/0:27,2:29:0.82:0,1,891	0/0:30,0:30:87.24:0,87,1051	0/0:18,0:18:54.15:0,54,656
chr10	42138798	.	G	GA	4200.19	PASS	AB=0.576;AC=15;AF=0.268;AN=56;BaseQRankSum=-0.008;DP=644;FS=4.385;HRun=9;HaplotypeScore=94.9907;InbreedingCoeff=0.9311;MQ=74.83;MQ0=0;MQRankSum=-0.531;QD=24.85;ReadPosRankSum=1.027;VQSLOD=3.9488;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:50.94:0,51,434	0/0:14,0:14:32.97:0,33,283	0/0:19,0:19:26.90:0,27,225	0/0:7,0:7:14.99:0,15,130	0/0:37,0:37:95.88:0,96,821	1/1:10,22:32:52.11:783,52,0	1/1:2,26:28:60.16:664,60,0	0/0:41,0:41:99:0,102,875	0/0:27,0:27:71.97:0,72,625	0/0:28,0:28:80.98:0,81,701	0/0:19,0:19:50.99:0,51,443	1/1:4,16:20:45.11:489,45,0	1/1:2,16:18:20.24:410,20,0	0/1:5,13:19:4.15:395,0,4	0/0:25,0:25:68.97:0,69,599	0/0:20,0:20:53.95:0,54,465	0/0:23,0:23:62.96:0,63,543	0/0:21,0:21:47.97:0,48,416	0/0:25,0:25:51.87:0,52,445	0/0:35,0:35:83.94:0,84,723	0/0:22,0:21:53.97:0,54,469	1/1:0,19:19:48.13:531,48,0	1/1:4,17:21:51.14:564,51,0	1/1:1,11:12:33.09:365,33,0	0/0:22,1:23:29.76:0,30,481	0/0:28,0:28:74.98:0,75,651	0/0:28,0:28:56.94:0,57,491	0/0:13,0:13:35.98:0,36,312
chr10	42139566	.	G	GT	11925.06	PASS	AB=0.586;AC=48;AF=0.857;AN=56;BaseQRankSum=-10.853;DP=616;FS=4.809;HRun=9;HaplotypeScore=67.8295;InbreedingCoeff=0.7349;MQ=81.17;MQ0=1;MQRankSum=-3.842;QD=23.34;ReadPosRankSum=5.595;VQSLOD=5.4063;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:3,32:35:58.17:870,58,0	0/0:14,0:14:38.99:0,39,338	0/0:53,0:41:50.90:0,51,443	0/0:36,0:29:39.50:0,39,332	1/1:11,21:33:42.93:671,43,0	1/1:1,15:16:36.10:398,36,0	1/1:3,15:18:41.93:436,42,0	1/1:6,18:24:7.97:498,8,0	1/1:7,14:22:9.88:320,10,0	1/1:3,13:16:36.09:390,36,0	1/1:5,14:19:39.02:404,39,0	1/1:2,23:25:60.12:650,60,0	1/1:3,16:19:45.12:498,45,0	1/1:2,16:18:22.18:472,22,0	1/1:2,20:22:50.29:563,50,0	1/1:0,24:25:66.01:711,66,0	1/1:3,22:25:34.11:604,34,0	1/1:2,8:10:18.05:199,18,0	1/1:5,12:17:38.94:411,39,0	1/1:4,18:24:30.77:533,31,0	1/1:1,18:19:36.10:398,36,0	1/1:4,17:20:48.13:531,48,0	1/1:1,20:21:45.12:498,45,0	0/1:2,6:8:4.99:178,0,5	1/1:4,17:21:42.11:463,42,0	1/1:4,18:22:31.10:571,31,0	1/1:3,18:21:44.81:479,45,0	0/1:3,6:9:4.99:178,0,5
chr10	42139979	.	AAGAGAGAGAGAGAGAGAGAG	A	1845.10	PASS	AB=1.000;AC=10;AF=0.192;AN=52;BaseQRankSum=4.543;DP=477;FS=4.023;HRun=0;HaplotypeScore=228.4133;InbreedingCoeff=0.6241;MQ=69.83;MQ0=5;MQRankSum=-4.549;QD=19.63;ReadPosRankSum=1.598;VQSLOD=2.0122;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:18.06:0,18,1314	0/0:6,0:6:12.04:0,12,783	./.	0/0:23,0:12:0:0,0,0	0/0:22,0:21:24.08:0,24,1646	0/0:15,0:15:15.05:0,15,910	0/0:19,0:19:18.06:0,18,1320	0/1:22,0:22:16.81:53,0,17	0/0:24,0:24:29.61:0,30,2083	0/0:17,0:16:33.10:0,33,1610	0/0:13,0:13:12.04:0,12,679	0/0:11,0:14:15.04:0,15,531	0/0:11,0:11:18.06:0,18,777	0/0:16,0:16:24.07:0,24,1020	0/0:22,0:23:36.09:0,36,2078	0/0:15,0:15:21.07:0,21,1238	0/0:20,0:19:34.91:0,35,2002	0/0:15,0:16:15.05:0,15,876	0/1:16,0:16:15.67:30,0,16	1/1:10,6:16:3.01:159,3,0	./.	0/0:19,0:18:21.06:0,21,1002	0/0:15,0:15:27.09:0,27,1378	0/0:15,0:23:39.61:0,40,2278	0/0:14,0:14:12.04:0,12,789	1/1:12,7:19:8.66:337,9,0	1/1:8,7:15:18.06:935,18,0	1/1:3,3:6:9.03:478,9,0
chr10	42144263	.	GT	G	4323.19	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=11.141;DP=460;FS=2.024;HRun=2;HaplotypeScore=47.5496;InbreedingCoeff=0.9713;MQ=76.14;MQ0=0;MQRankSum=-1.214;QD=36.03;ReadPosRankSum=3.202;VQSLOD=5.2123;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,114,1665	0/0:6,0:6:18.05:0,18,251	0/0:23,1:22:60.15:0,60,851	0/0:16,0:16:48.14:0,48,690	1/1:0,11:11:27.05:332,27,0	0/0:21,0:21:60.20:0,60,880	0/0:9,0:9:27.09:0,27,404	0/0:35,0:35:99:0,102,1504	1/1:0,16:16:48.16:623,48,0	1/1:0,11:11:33.06:410,33,0	1/1:0,4:4:9.03:117,9,0	0/0:19,0:19:57.19:0,57,853	0/0:18,0:18:54.17:0,54,790	0/0:12,0:12:36.11:0,36,522	1/1:0,20:20:51.17:662,51,0	1/1:0,13:13:39.13:506,39,0	1/1:0,19:19:57.19:739,57,0	1/1:0,14:14:42.14:545,42,0	0/0:17,0:17:51.16:0,51,746	0/0:9,0:9:27.09:0,27,401	0/0:38,0:38:99:0,108,1617	0/0:6,0:6:18.06:0,18,270	0/0:9,0:9:27.09:0,27,403	0/0:21,0:21:63.20:0,63,921	1/1:1,11:12:30.10:389,30,0	0/0:13,0:13:39.13:0,39,583	0/0:25,0:25:75.24:0,75,1105	0/0:2,0:2:6.02:0,6,90
chr10	42144559	.	AT	A	276.01	PASS	AC=2;AF=0.038;AN=52;BaseQRankSum=5.017;DP=298;FS=43.889;HRun=2;HaplotypeScore=34.4728;InbreedingCoeff=0.8116;MQ=68.75;MQ0=0;MQRankSum=-4.429;QD=19.72;ReadPosRankSum=-1.768;VQSLOD=0.6627;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:42.14:0,42,629	0/0:7,0:7:21.07:0,21,314	./.	0/0:6,0:7:13.09:0,13,128	0/0:22,0:22:63.20:0,63,924	0/0:16,0:16:45.15:0,45,664	0/0:6,0:6:18.06:0,18,270	0/0:34,0:34:99:0,102,1494	0/0:5,0:5:15.05:0,15,225	0/0:9,0:9:24.08:0,24,360	0/0:16,0:16:42.14:0,42,629	0/0:6,0:6:18.05:0,18,250	0/0:7,0:7:21.06:0,21,295	0/0:11,0:11:33.11:0,33,495	0/0:10,0:10:24.08:0,24,360	0/0:9,0:9:27.09:0,27,405	1/1:1,13:13:30.05:370,30,0	0/0:12,0:12:33.11:0,33,495	0/0:25,0:25:63.20:0,63,924	0/0:14,0:14:39.13:0,39,585	0/0:10,0:10:24.08:0,24,360	0/0:2,0:2:6.02:0,6,90	./.	0/0:4,0:4:12.04:0,12,180	0/0:10,0:10:30.09:0,30,431	0/0:14,0:14:42.14:0,42,630	0/0:5,0:5:15.05:0,15,225	0/0:9,0:9:21.07:0,21,308
chr10	42144567	.	AT	A	259.71	PASS	AC=2;AF=0.037;AN=54;BaseQRankSum=4.743;DP=294;FS=28.114;HRun=1;HaplotypeScore=34.1683;InbreedingCoeff=0.7018;MQ=71.91;MQ0=0;MQRankSum=-4.178;QD=17.31;ReadPosRankSum=-0.594;VQSLOD=1.9180;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:48.15:0,48,733	0/0:8,0:8:24.05:0,24,358	0/0:2,0:2:3.01:0,3,48	0/0:7,0:7:12.36:0,12,116	0/0:22,0:22:63.21:0,63,998	0/0:16,0:16:48.15:0,48,730	0/0:8,0:8:24.08:0,24,384	0/0:35,0:35:99:0,105,1617	0/0:4,0:4:12.04:0,12,173	0/0:9,0:9:27.09:0,27,432	0/0:13,0:13:36.12:0,36,576	0/0:6,0:6:18.05:0,18,265	0/0:6,0:6:18.06:0,18,288	0/0:11,0:11:33.11:0,33,509	0/0:8,0:8:24.08:0,24,384	0/0:8,0:8:24.08:0,24,384	1/1:0,15:14:27.04:353,27,0	0/0:10,0:10:30.10:0,30,480	0/0:20,0:20:57.18:0,57,859	0/0:12,0:12:36.12:0,36,576	0/0:10,0:10:24.08:0,24,384	0/0:2,0:2:6.02:0,6,96	./.	0/0:4,0:4:12.04:0,12,192	0/0:9,0:9:27.09:0,27,432	0/0:17,0:17:51.17:0,51,805	0/0:6,0:6:18.05:0,18,265	0/0:10,0:10:21.07:0,21,335
chr10	42144933	.	AT	A	649.24	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.813;DP=429;FS=4.025;HRun=5;HaplotypeScore=50.8831;InbreedingCoeff=0.7285;MQ=63.69;MQ0=0;MQRankSum=0.825;QD=22.39;ReadPosRankSum=0.480;VQSLOD=2.6292;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,102,1376	0/0:5,0:5:15.05:0,15,205	0/0:8,0:8:9.86:0,10,160	0/0:11,0:9:24.08:0,24,328	1/1:2,27:28:66.18:744,66,0	0/0:23,0:23:69.22:0,69,927	0/0:8,0:8:24.08:0,24,327	0/0:28,0:28:78.25:0,78,1053	0/0:14,0:14:39.13:0,39,534	0/0:22,0:21:63.20:0,63,849	0/0:21,0:21:57.17:0,57,746	0/0:12,0:12:27.08:0,27,355	0/0:8,0:8:24.08:0,24,328	0/0:13,0:13:39.12:0,39,517	0/0:19,0:19:51.17:0,51,697	0/0:24,0:24:66.20:0,66,885	0/0:13,0:13:36.12:0,36,492	0/0:6,0:6:18.04:0,18,229	0/0:11,0:10:27.09:0,27,369	0/0:5,0:5:12.04:0,12,158	0/0:7,0:7:15.05:0,15,205	0/0:1,0:1:3.01:0,3,40	0/0:10,0:8:21.07:0,21,285	0/0:3,0:3:9.03:0,9,121	0/0:22,0:22:60.20:0,60,821	0/0:24,0:24:66.22:0,66,903	0/0:27,0:27:69.23:0,69,944	0/0:18,0:17:45.15:0,45,615
chr10	42145453	.	C	CCT	251.70	PASS	AB=0.500;AC=19;AF=0.792;AN=24;BaseQRankSum=0.886;DP=51;FS=0.000;HRun=0;HaplotypeScore=110.7395;InbreedingCoeff=0.3382;MQ=28.05;MQ0=0;MQRankSum=2.396;QD=5.47;ReadPosRankSum=-1.215;VQSLOD=2.9875;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	1/1:0,5:5:8.66:58,9,0	./.	./.	0/1:0,5:6:0.23:0,0,1	./.	./.	./.	./.	1/1:0,5:5:14.91:109,15,0	1/1:0,5:5:2.07:7,2,0	./.	1/1:0,3:3:2.87:15,3,0	./.	./.	./.	./.	./.	./.	1/1:0,4:4:2.80:13,3,0	./.	0/0:0,2:2:0.22:0,0,1	1/1:0,5:5:6.66:27,7,0	1/1:0,1:1:2.74:12,3,0	1/1:0,9:9:9.42:48,9,0	0/0:0,1:1:2.74:0,3,12	./.	1/1:0,3:3:5.96:44,6,0
chr10	42145455	.	CAAG	C	256.20	PASS	AC=18;AF=0.750;AN=24;BaseQRankSum=0.702;DP=51;FS=0.000;HRun=0;HaplotypeScore=111.7857;InbreedingCoeff=0.3914;MQ=28.05;MQ0=0;MQRankSum=-0.214;QD=6.92;ReadPosRankSum=1.129;VQSLOD=2.5505;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	1/1:0,5:5:12.63:49,13,0	./.	./.	0/0:0,6:6:0.74:0,1,1	./.	./.	./.	./.	1/1:0,5:5:14.69:90,15,0	0/0:0,5:5:0.38:0,0,1	./.	1/1:0,3:3:5.37:46,5,0	./.	./.	./.	./.	./.	./.	1/1:0,4:4:2.22:7,2,0	./.	1/1:0,2:2:5.05:49,5,0	1/1:0,5:5:2.66:8,3,0	1/1:0,1:1:1.82:5,2,0	1/1:0,9:9:11.49:46,11,0	0/0:0,1:1:2.37:0,2,8	./.	1/1:0,3:3:5.88:35,6,0
chr10	42145464	.	G	GA	745.74	PASS	AC=24;AF=1.000;AN=24;DP=51;FS=0.000;HRun=0;HaplotypeScore=106.6828;InbreedingCoeff=0.1124;MQ=28.05;MQ0=0;QD=15.22;VQSLOD=5.3632;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	1/1:0,5:5:14.93:116,15,0	./.	./.	1/1:0,6:6:0.10:1,0,0	./.	./.	./.	./.	1/1:0,5:5:14.99:127,15,0	1/1:0,5:5:5.84:35,6,0	./.	1/1:0,3:3:5.98:63,6,0	./.	./.	./.	./.	./.	./.	1/1:0,4:4:2.97:20,3,0	./.	1/1:0,2:2:5.51:50,6,0	1/1:0,5:5:9.38:61,9,0	1/1:0,1:1:2.96:19,3,0	1/1:0,9:9:23.99:262,24,0	1/1:0,1:1:2.88:15,3,0	./.	1/1:0,3:3:5.99:50,6,0
chr10	42147251	.	CT	C	13867.05	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-0.485;DP=646;FS=6.497;HRun=8;HaplotypeScore=84.5458;InbreedingCoeff=0.9982;MQ=62.05;MQ0=1;MQRankSum=0.508;QD=23.31;ReadPosRankSum=4.747;VQSLOD=5.3554;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,17:18:42.06:405,42,0	0/0:9,0:9:24.07:0,24,290	0/0:20,0:19:48.12:0,48,547	0/0:21,0:18:32.29:0,32,350	1/1:6,27:33:63.08:608,63,0	1/1:4,31:35:87.14:840,87,0	1/1:2,10:12:24.04:232,24,0	1/1:6,29:31:77.86:707,78,0	1/1:0,25:26:74.15:701,74,0	1/1:7,37:44:99:1037,108,0	1/1:0,21:20:60.10:579,60,0	1/1:2,17:19:48.07:463,48,0	1/1:4,17:21:42.06:405,42,0	1/1:3,15:18:30.05:290,30,0	1/1:0,22:22:66.11:637,66,0	1/1:2,21:23:51.08:493,51,0	1/1:0,22:22:54.09:522,54,0	1/1:0,19:19:48.08:463,48,0	1/1:5,14:18:42.06:406,42,0	1/1:3,29:32:84.08:801,84,0	1/1:1,16:17:48.08:464,48,0	1/1:2,18:20:45.07:434,45,0	1/1:1,19:20:57.09:548,57,0	1/1:1,16:17:38.94:376,39,0	1/1:2,20:22:50.85:492,51,0	1/1:2,26:28:77.88:717,78,0	1/1:4,29:33:75.12:724,75,0	1/1:1,18:19:54.09:521,54,0
chr10	42147378	.	GTTT	G	4785.05	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-7.412;DP=509;FS=0.400;HRun=11;HaplotypeScore=99.5170;InbreedingCoeff=0.9813;MQ=56.16;MQ0=5;MQRankSum=2.932;QD=29.54;ReadPosRankSum=6.624;VQSLOD=3.7325;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:12:36.12:0,36,558	0/0:7,0:7:18.06:0,18,364	0/0:11,0:6:9.03:0,9,153	0/0:11,0:10:15.05:0,15,257	1/1:1,20:19:45.14:591,45,0	0/0:4,0:20:51.17:0,51,747	0/0:2,0:9:18.06:0,18,270	0/0:10,0:30:81.26:0,81,1179	1/1:2,9:11:26.59:354,27,0	1/1:0,23:24:26.01:791,26,0	1/1:0,18:18:36.08:473,36,0	0/0:10,0:19:36.12:0,36,553	0/0:4,0:14:21.05:0,21,267	0/0:6,0:14:21.06:0,21,266	1/1:5,12:18:42.10:552,42,0	1/1:4,14:18:33.07:434,33,0	1/1:4,14:18:42.10:552,42,0	1/1:3,15:19:20.33:486,20,0	0/0:9,0:18:42.14:0,42,646	0/0:5,0:30:90.30:0,90,1317	0/0:2,0:12:27.09:0,27,406	0/0:7,0:21:57.18:0,57,797	0/0:8,0:26:49.21:0,49,678	0/0:6,0:11:20.08:0,20,233	1/1:0,15:15:42.14:552,42,0	0/0:4,1:31:47.86:0,48,1190	0/0:5,0:25:54.18:0,54,792	0/0:2,0:11:18.06:0,18,259
chr10	42148301	.	ACATCCCTG	A	477.14	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.033;DP=646;FS=1.502;HRun=0;HaplotypeScore=166.9575;InbreedingCoeff=0.9751;MQ=58.26;MQ0=4;MQRankSum=-4.329;QD=43.38;ReadPosRankSum=0.865;VQSLOD=3.6217;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:72.25:0,72,3027	0/0:9,0:9:15.05:0,15,641	0/0:21,0:9:27.07:0,27,942	0/0:23,0:10:24.08:0,24,885	0/0:25,0:25:75.26:0,75,3230	0/0:23,0:22:60.21:0,60,2582	0/0:15,0:15:42.14:0,42,1747	0/0:29,0:29:69.24:0,69,2841	0/0:28,0:28:75.24:0,75,3047	0/0:32,0:32:90.31:0,90,3844	0/0:23,0:23:69.22:0,69,2808	0/0:23,0:23:66.23:0,66,2847	0/0:23,0:23:66.23:0,66,2776	0/0:24,0:24:69.22:0,69,2770	0/0:26,0:26:75.26:0,75,3229	0/0:21,0:21:54.17:0,54,2183	1/1:3,8:11:21.07:569,21,0	0/0:22,0:22:57.19:0,57,2280	0/0:18,0:13:30.10:0,30,1244	0/0:36,0:36:99:0,105,4444	0/0:24,0:24:66.23:0,66,2847	0/0:26,0:26:69.22:0,69,2865	0/0:30,0:30:75.26:0,75,3233	0/0:10,0:10:24.08:0,24,991	0/0:26,0:26:66.23:0,66,2816	0/0:24,0:24:60.21:0,60,2583	0/0:23,0:22:66.23:0,66,2815	0/0:19,0:19:54.19:0,54,2321
chr10	42149200	.	TC	T	490.91	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=1.272;DP=613;FS=2.052;HRun=1;HaplotypeScore=85.0500;InbreedingCoeff=0.9956;MQ=77.70;MQ0=0;MQRankSum=-0.917;QD=28.88;ReadPosRankSum=0.547;VQSLOD=3.4693;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:63.13:0,63,868	0/0:8,0:8:24.08:0,24,343	0/0:21,1:20:48.77:0,49,709	0/0:23,0:23:56.77:0,57,791	0/0:36,0:36:99:0,105,1463	0/0:21,0:21:60.15:0,60,801	0/0:21,0:21:63.18:0,63,862	0/0:24,0:24:72.22:0,72,981	0/0:19,0:19:49.05:0,49,687	0/0:32,0:32:93.25:0,93,1276	0/0:30,0:30:83.80:0,84,1106	0/0:18,0:18:54.17:0,54,751	0/0:29,0:29:87.24:0,87,1169	0/0:24,0:24:72.14:0,72,932	0/0:29,0:29:87.25:0,87,1187	0/0:21,0:21:63.18:0,63,864	1/1:0,17:17:42.14:586,42,0	0/0:8,0:8:24.02:0,24,297	0/0:29,0:29:87.26:0,87,1182	0/0:25,0:25:75.14:0,75,991	0/0:11,0:11:33.08:0,33,434	0/0:19,0:19:57.16:0,57,777	0/0:14,0:14:39.08:0,39,515	0/0:20,0:20:60.15:0,60,800	0/0:24,0:24:72.23:0,72,1011	0/0:23,0:23:66.21:0,66,910	0/0:30,0:29:87.21:0,87,1163	0/0:15,0:15:45.15:0,45,642
chr10	42149585	.	G	GA	6018.60	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-14.563;DP=633;FS=1.500;HRun=6;HaplotypeScore=59.4414;InbreedingCoeff=0.9951;MQ=82.46;MQ0=0;MQRankSum=-1.239;QD=31.84;ReadPosRankSum=2.025;VQSLOD=5.4265;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,123,1230	0/0:11,0:11:33.07:0,33,336	0/0:16,0:16:39.09:0,39,398	0/0:21,0:20:53.95:0,54,510	1/1:6,27:33:78.21:963,78,0	0/0:29,0:29:81.17:0,81,819	0/0:14,0:14:39.09:0,39,397	0/0:28,0:28:72.13:0,72,717	1/1:1,18:19:48.15:604,48,0	1/1:1,25:26:75.24:944,75,0	1/1:1,18:19:54.17:679,54,0	0/0:17,0:17:48.10:0,48,483	0/0:30,0:30:78.12:0,78,777	0/0:21,0:21:63.11:0,63,630	1/1:3,19:22:48.15:602,48,0	1/1:1,21:22:57.18:717,57,0	1/1:1,23:24:57.18:717,57,0	1/1:1,3:4:12.04:151,12,0	0/0:19,0:19:54.12:0,54,551	0/0:28,0:28:78.16:0,78,789	0/0:20,1:21:50.20:0,50,518	0/0:19,0:19:54.10:0,54,543	0/0:24,0:24:69.14:0,69,696	0/0:19,0:19:51.11:0,51,520	1/1:2,18:20:51.16:642,51,0	0/0:28,1:29:40.42:0,40,721	0/0:32,0:32:84.19:0,84,857	0/0:20,0:20:51.12:0,51,520
chr10	42149725	.	A	AACACACAC	8009.34	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=-4.453;DP=723;FS=13.343;HRun=0;HaplotypeScore=188.9895;InbreedingCoeff=0.8991;MQ=67.08;MQ0=4;MQRankSum=-11.510;QD=32.04;ReadPosRankSum=-3.204;VQSLOD=3.1557;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:35:7.33:0,7,1943	0/0:11,0:11:30.01:0,30,565	0/0:46,0:35:42.82:0,43,1048	0/1:63,0:46:14.76:15,0,597	0/0:24,0:24:63.18:0,63,1508	1/1:4,15:21:27.09:1130,27,0	1/1:3,13:18:24.08:932,24,0	0/0:28,0:28:54.15:0,54,1044	0/0:21,0:21:57.17:0,57,1348	0/0:25,0:25:15.09:0,15,1460	0/0:17,0:18:54.15:0,54,1220	1/1:1,15:16:27.09:1114,27,0	1/1:7,19:29:36.12:1419,36,0	1/1:2,13:17:27.09:1022,27,0	0/0:26,0:26:53.92:0,54,1348	0/0:22,0:22:57.16:0,57,1304	1/1:3,0:18:15.05:474,15,0	0/0:11,0:11:27.08:0,27,652	0/0:25,0:24:42.07:0,42,967	0/0:23,0:23:54.19:0,54,1410	0/0:62,0:62:99:0,153,3356	1/1:4,15:23:21.92:908,22,0	1/1:4,15:22:14.60:530,15,0	1/1:2,17:21:15.05:466,15,0	0/0:16,0:16:33.07:0,33,675	0/0:31,0:31:78.25:0,78,1892	0/0:25,0:25:75.12:0,75,1587	0/0:23,0:23:60.21:0,60,1518
chr10	42150791	.	CTTTA	C	1061.98	PASS	AB=0.917;AC=13;AF=0.342;AN=38;BaseQRankSum=-1.571;DP=287;FS=0.000;HRun=0;HaplotypeScore=49.3871;InbreedingCoeff=0.5577;MQ=62.70;MQ0=1;MQRankSum=2.241;QD=8.17;ReadPosRankSum=1.110;VQSLOD=1.8272;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,14:24:30.10:469,30,0	0/0:4,0:4:3.01:0,3,44	./.	./.	0/0:8,0:11:3.01:0,3,52	0/0:4,0:3:3.01:0,3,60	./.	1/1:37,0:37:6.02:93,6,0	0/0:3,0:9:21.07:0,21,359	0/0:15,0:15:12.03:0,12,241	0/0:14,0:14:6.02:0,6,142	0/0:10,0:10:6.01:0,6,58	0/0:10,0:10:3.01:0,3,60	0/0:9,0:9:9.03:0,9,150	./.	./.	0/0:18,0:16:15.48:0,15,180	0/0:13,0:13:12.02:0,12,195	1/1:11,5:16:15.05:235,15,0	./.	./.	./.	0/0:9,0:9:3.01:0,3,49	./.	0/1:10,1:11:31.87:32,0,268	1/1:9,3:12:9.03:141,9,0	1/1:10,3:13:6.02:94,6,0	1/1:9,7:16:9.03:141,9,0
chr10	42150807	.	AT	A	31.14	PASS	AB=0.686;AC=4;AF=0.077;AN=52;BaseQRankSum=1.467;DP=223;FS=4.209;HRun=3;HaplotypeScore=30.8926;InbreedingCoeff=0.0758;MQ=51.40;MQ0=4;MQRankSum=-1.106;QD=3.11;ReadPosRankSum=1.935;VQSLOD=-0.1933;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:22:14.21:0,14,139	0/0:3,0:3:9.03:0,9,127	0/0:2,0:1:3.01:0,3,42	./.	0/0:5,0:5:6.01:0,6,67	0/0:2,3:4:3.01:0,3,43	1/1:1,1:2:3.01:37,3,0	0/0:32,0:32:86.05:0,86,1213	0/0:7,0:7:20.99:0,21,191	0/0:8,0:8:24.08:0,24,341	0/0:8,0:8:24.08:0,24,338	0/1:1,3:4:32.98:65,0,33	0/0:5,0:5:3.01:0,3,43	0/1:3,1:4:28.08:28,0,77	0/0:2,0:2:3.01:0,3,42	0/0:1,0:1:3.01:0,3,42	0/0:20,0:17:38.93:0,39,476	0/0:13,0:13:30.10:0,30,422	0/0:14,0:12:23.38:0,23,265	0/0:6,0:6:15.04:0,15,184	0/0:2,0:2:3.01:0,3,42	0/0:1,0:1:3.01:0,3,42	0/0:2,0:2:3.01:0,3,43	./.	0/0:12,0:12:21.54:0,22,300	0/0:12,0:12:25.49:0,25,331	0/0:13,0:13:21.98:0,22,275	0/0:16,0:15:13.45:0,13,172
chr10	42150819	.	AT	A	160.02	PASS	AB=0.759;AC=1;AF=0.023;AN=44;BaseQRankSum=1.080;DP=212;FS=1.346;HRun=3;HaplotypeScore=34.9216;InbreedingCoeff=-0.0892;MQ=49.35;MQ0=5;MQRankSum=-1.740;QD=7.27;ReadPosRankSum=1.471;VQSLOD=0.6561;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:23:13.22:0,13,92	0/0:3,0:3:9.03:0,9,119	./.	./.	0/0:8,0:8:2.68:0,3,24	0/0:5,0:4:3.01:0,3,43	0/0:2,0:2:3.01:0,3,41	0/0:28,0:27:71.04:0,71,1006	0/0:9,0:9:27.01:0,27,273	0/0:7,0:7:15.05:0,15,214	0/0:5,0:5:9.03:0,9,128	0/0:4,0:4:6.02:0,6,86	0/0:4,0:4:3.01:0,3,43	0/0:5,0:5:9.03:0,9,129	0/0:3,0:3:3.01:0,3,42	./.	0/1:15,7:18:92.18:233,0,92	0/0:11,0:11:27.09:0,27,376	0/0:14,0:12:23.41:0,23,267	0/0:6,0:6:18.06:0,18,233	./.	./.	0/0:2,0:2:6.02:0,6,84	./.	0/0:13,0:13:18.53:0,19,249	0/0:9,0:9:19.47:0,19,251	0/0:8,0:8:9.96:0,10,111	0/0:14,0:13:16.46:0,16,212
chr10	42150833	.	T	TA	34.39	PASS	AB=0.830;AC=6;AF=0.125;AN=48;BaseQRankSum=4.589;DP=245;FS=27.143;HRun=0;HaplotypeScore=42.0386;InbreedingCoeff=0.0701;MQ=48.48;MQ0=10;MQRankSum=-3.376;QD=0.65;ReadPosRankSum=2.910;VQSLOD=-0.3057;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:24:39.91:0,40,362	0/0:3,0:3:9.03:0,9,125	./.	./.	0/0:10,0:10:11.62:0,12,124	1/1:5,1:5:3.01:34,3,0	0/0:4,0:3:5.98:0,6,62	0/0:27,0:25:72.18:0,72,956	0/0:9,0:8:23.95:0,24,223	0/0:7,0:6:18.06:0,18,252	0/0:5,0:5:12.04:0,12,167	0/0:7,0:7:15.04:0,15,194	0/1:4,3:7:21.55:22,0,98	0/1:6,2:8:51.82:52,0,71	0/0:4,0:4:5.38:0,5,50	0/0:5,0:5:9.03:0,9,126	0/1:25,1:22:9.70:10,0,262	0/0:9,0:9:16.14:0,16,225	0/0:14,0:14:36.34:0,36,369	0/0:9,0:9:27.09:0,27,375	./.	0/0:2,0:2:6.02:0,6,83	0/1:5,1:6:31.03:31,0,152	./.	0/0:17,0:17:39.08:0,39,505	0/0:9,0:9:26.96:0,27,311	0/0:10,0:10:20.64:0,21,232	0/0:10,0:9:11.90:0,12,101
chr10	42151546	.	AGGG	A	5668.02	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=18.291;DP=649;FS=10.887;HRun=3;HaplotypeScore=170.2268;InbreedingCoeff=0.9846;MQ=86.61;MQ0=0;MQRankSum=-17.411;QD=31.84;ReadPosRankSum=1.745;VQSLOD=2.0086;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:51.18:0,51,1257	0/0:10,0:10:30.10:0,30,717	0/0:31,0:31:88.84:0,89,2052	0/0:23,0:23:66.22:0,66,1569	0/0:37,0:37:99:0,111,2685	1/1:1,19:20:60.18:722,60,0	1/1:3,14:17:38.81:442,39,0	0/0:25,0:25:75.26:0,75,1832	0/0:27,0:27:81.28:0,81,1996	0/0:24,0:24:72.25:0,72,1771	0/0:33,0:33:99:0,99,2439	1/1:3,24:27:81.21:970,81,0	1/1:2,20:22:66.20:793,66,0	1/1:1,15:16:48.09:543,48,0	0/0:31,0:31:93.32:0,93,2286	0/0:26,0:26:78.23:0,78,1765	1/1:0,11:11:27.06:313,27,0	0/0:14,0:14:42.14:0,42,1019	0/0:28,0:28:84.29:0,84,2069	0/0:23,0:23:69.24:0,69,1701	0/0:26,0:26:78.27:0,78,1892	1/1:0,25:26:69.17:820,69,0	1/1:2,27:29:84.20:1003,84,0	1/1:2,8:10:6.48:62,6,0	0/0:23,0:23:69.24:0,69,1694	0/0:25,0:25:75.25:0,75,1802	0/0:34,0:33:99:0,102,2504	0/0:12,0:12:36.12:0,36,888
chr10	42151550	.	ATAG	A	5553.27	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=18.906;DP=646;FS=9.990;HRun=0;HaplotypeScore=172.4555;InbreedingCoeff=0.9742;MQ=87.50;MQ0=0;MQRankSum=-17.393;QD=31.92;ReadPosRankSum=1.425;VQSLOD=4.9792;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:54.19:0,54,1329	0/0:10,0:10:30.10:0,30,739	0/0:32,0:31:69.48:0,69,1790	0/0:25,0:25:58.29:0,58,1627	0/0:38,0:38:99:0,114,2779	1/1:1,19:20:60.18:720,60,0	1/1:2,14:16:37:436,37,0	0/0:24,0:24:72.24:0,72,1720	0/0:29,0:29:87.27:0,87,2073	0/0:24,0:24:69.24:0,69,1699	0/0:33,0:33:99:0,99,2385	1/1:3,24:27:80.60:953,81,0	1/1:2,20:22:65.39:754,65,0	1/1:1,15:16:47.14:523,47,0	0/0:31,0:31:93.32:0,93,2246	0/0:24,0:24:72.25:0,72,1771	1/1:1,11:12:29.88:320,30,0	0/0:13,0:13:39.08:0,39,858	0/0:28,0:28:84.25:0,84,1896	0/0:24,0:24:72.23:0,72,1726	0/0:24,0:24:72.25:0,72,1775	1/1:1,23:24:68.24:799,68,0	1/1:2,27:29:86.28:1012,86,0	1/1:0,8:8:3.48:37,3,0	0/0:24,0:24:72.23:0,72,1726	0/0:24,0:24:72.24:0,72,1713	0/0:34,0:33:99:0,99,2434	0/0:12,0:12:36.12:0,36,887
chr10	42154132	.	C	CA	132.92	PASS	AC=18;AF=0.750;AN=24;BaseQRankSum=2.240;DP=106;FS=5.893;HRun=0;HaplotypeScore=14.3145;InbreedingCoeff=0.4267;MQ=128.73;MQ0=17;MQRankSum=-2.939;QD=6.04;ReadPosRankSum=-3.579;VQSLOD=1.4906;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/0:2,0:2:6.02:0,6,84	0/0:30,0:22:63.13:0,63,816	0/0:28,0:14:36.12:0,36,500	./.	./.	1/1:1,0:1:3:25,3,0	1/1:3,0:2:3:27,3,0	1/1:2,0:2:2.99:24,3,0	./.	./.	./.	1/1:1,0:1:3:25,3,0	1/1:3,0:3:3:25,3,0	./.	1/1:3,0:3:3.01:37,3,0	./.	./.	1/1:3,2:1:3:25,3,0	./.	./.	1/1:3,0:3:3:25,3,0	./.	./.	./.	./.	1/1:1,0:1:2.99:24,3,0	./.
chr10	42159581	.	G	GA	172.15	PASS	AB=1.000;AC=8;AF=0.571;AN=14;BaseQRankSum=4.004;DP=68;FS=0.000;HRun=7;HaplotypeScore=49.1456;MQ=86.25;MQ0=5;MQRankSum=-2.589;QD=5.94;ReadPosRankSum=-0.627;VQSLOD=-0.5626;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/1:10,0:5:1.91:2,0,11	0/1:12,0:6:0:0,0,0	./.	./.	./.	./.	1/1:0,1:1:3.01:36,3,0	./.	./.	./.	./.	./.	./.	1/1:0,2:2:6.02:72,6,0	0/0:17,1:17:2.53:0,3,311	0/0:19,1:20:15.03:0,15,428	./.	./.	./.	./.	./.	1/1:0,4:4:12.04:145,12,0	./.	./.	./.	./.
chr10	42162411	.	AGG	A	1233.13	PASS	AB=0.771;AC=16;AF=0.286;AN=56;BaseQRankSum=5.029;DP=502;FS=9.064;HRun=4;HaplotypeScore=108.5544;InbreedingCoeff=0.7651;MQ=75.08;MQ0=8;MQRankSum=-0.014;QD=8.62;ReadPosRankSum=3.085;VQSLOD=-0.2676;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:35.62:0,36,267	0/0:6,0:6:18.05:0,18,306	0/0:37,0:29:84.08:0,84,1075	0/0:34,0:23:49.49:0,49,491	0/0:26,0:25:49.18:0,49,443	1/1:11,0:11:23.73:173,24,0	1/1:27,0:27:29.47:350,29,0	0/0:28,0:28:77.76:0,78,652	0/0:13,0:13:32.90:0,33,351	0/0:17,0:17:36.49:0,36,380	0/0:9,0:9:26.82:0,27,244	1/1:17,0:17:11.62:158,12,0	1/1:8,0:8:11.52:107,12,0	1/1:14,0:14:24.50:209,25,0	0/0:20,0:18:40.57:0,41,410	0/0:20,0:20:30.02:0,30,303	0/1:4,22:26:43:108,0,43	0/0:20,0:19:46.57:0,47,424	0/0:20,0:19:47.93:0,48,457	0/0:17,0:17:41.64:0,42,320	0/0:26,0:26:3.01:0,3,40	1/1:11,0:11:17.95:144,18,0	0/1:13,0:12:47.04:84,0,47	1/1:16,0:15:11.60:96,12,0	0/0:11,0:10:26.92:0,27,237	0/0:14,0:13:35.99:0,36,342	0/0:16,0:16:8.62:0,9,77	0/0:6,0:6:18.01:0,18,201
chr10	42162414	.	G	GGTGTATGT	4701.44	PASS	AB=0.975;AC=29;AF=0.518;AN=56;BaseQRankSum=0.813;DP=578;FS=5.643;HRun=0;HaplotypeScore=197.6967;InbreedingCoeff=0.0238;MQ=64.52;MQ0=9;MQRankSum=-3.978;QD=10.78;ReadPosRankSum=-5.063;VQSLOD=1.7363;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:23:26.87:267,27,0	0/0:6,0:6:15.05:0,15,373	0/0:33,0:25:69.08:0,69,868	0/0:31,0:20:38.28:0,38,310	0/1:28,0:26:89.07:89,0,231	0/0:13,0:13:17.40:0,17,152	0/1:29,0:29:72.90:73,0,193	1/1:35,0:35:91.18:945,91,0	0/1:18,0:18:71.06:149,0,71	0/1:15,0:15:79.60:123,0,80	0/1:13,0:13:99:123,0,102	0/1:23,0:23:70.96:71,0,137	0/1:16,0:16:93.83:426,0,94	0/0:20,0:20:15.63:0,16,135	0/1:24,0:22:11.94:12,0,198	0/1:12,0:23:99:174,0,164	0/0:25,0:25:10.30:0,10,153	0/1:20,0:19:87.21:87,0,222	1/1:21,0:19:48.33:598,48,0	1/1:6,9:21:6.48:215,6,0	1/1:30,0:30:6.01:98,6,0	0/0:14,0:14:20.93:0,21,165	0/1:17,0:16:87.69:88,0,147	0/1:18,0:17:52.47:52,0,61	0/1:12,0:11:68.50:68,0,92	1/1:15,0:14:8.46:296,8,0	1/1:24,0:24:14.03:437,14,0	1/1:9,0:9:23.94:310,24,0
chr10	42162417	.	G	GTA	1573.54	PASS	AB=0.860;AC=14;AF=0.250;AN=56;BaseQRankSum=1.092;DP=601;FS=2.700;HRun=0;HaplotypeScore=171.1748;InbreedingCoeff=0.3396;MQ=60.49;MQ0=10;MQRankSum=-2.909;QD=7.02;ReadPosRankSum=-0.811;VQSLOD=2.8745;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:28:1.80:154,2,0	0/0:6,0:6:18.04:0,18,253	0/0:33,0:23:69.08:0,69,780	0/0:34,0:19:41.08:0,41,422	0/0:29,0:27:34.79:0,35,320	0/0:14,0:14:20.93:0,21,175	0/0:29,0:29:33.07:0,33,308	1/1:39,0:39:33.56:628,34,0	0/0:19,0:19:6.93:0,7,121	0/0:14,0:14:19.31:0,19,181	0/0:14,0:14:6.08:0,6,157	0/0:22,0:22:11.42:0,11,151	0/1:17,0:17:24.54:25,0,112	0/0:20,0:20:8:0,8,127	0/0:26,0:24:20.86:0,21,276	0/0:23,0:23:8.33:0,8,173	0/0:29,0:29:14.84:0,15,134	0/0:21,0:20:40.38:0,40,311	1/1:21,0:19:20.52:322,21,0	0/1:17,0:17:15.08:60,0,15	0/1:7,22:31:16.46:43,0,16	0/0:16,0:16:20.95:0,21,169	0/0:17,0:16:16.63:0,17,198	0/1:19,0:18:0.60:1,0,82	0/0:11,0:10:2.70:0,3,85	0/1:18,0:16:32.11:231,0,32	0/1:7,14:22:17.90:143,0,18	1/1:10,0:10:17.15:133,17,0
chr10	42165942	.	TA	T	2427.26	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=7.646;DP=706;FS=2.838;HRun=2;HaplotypeScore=89.2425;InbreedingCoeff=0.9832;MQ=84.63;MQ0=0;MQRankSum=-2.250;QD=31.52;ReadPosRankSum=0.822;VQSLOD=3.3988;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,132,1953	0/0:4,0:4:12.04:0,12,180	0/0:24,0:24:62.71:0,63,886	0/0:21,0:21:52:0,52,677	1/1:1,26:27:69.22:896,69,0	0/0:21,0:21:63.20:0,63,925	0/0:29,0:29:87.25:0,87,1257	0/0:37,0:37:99:0,111,1614	1/1:0,24:24:63.20:818,63,0	0/0:27,0:27:78.26:0,78,1151	0/0:24,0:24:69.22:0,69,1010	0/0:29,0:29:87.27:0,87,1265	0/0:35,0:35:99:0,105,1547	0/0:22,0:22:66.22:0,66,989	0/0:22,0:22:66.22:0,66,980	1/1:2,24:26:66.21:856,66,0	0/0:28,0:28:84.28:0,84,1253	0/0:10,0:10:27.09:0,27,405	0/0:28,0:27:81.27:0,81,1214	0/0:28,0:28:78.26:0,78,1167	0/0:31,0:31:90.30:0,90,1348	0/0:18,0:18:54.17:0,54,789	0/0:26,0:26:78.26:0,78,1159	0/0:25,0:25:75.25:0,75,1119	0/0:22,0:22:66.21:0,66,970	0/0:35,0:35:99:0,102,1522	0/0:32,0:32:93.28:0,93,1350	0/0:6,0:6:15.05:0,15,225
chr10	42166861	.	CAT	C	17806.74	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=15.155;DP=737;FS=5.524;HRun=0;HaplotypeScore=90.5868;InbreedingCoeff=0.9851;MQ=85.80;MQ0=1;MQRankSum=-5.594;QD=41.03;ReadPosRankSum=2.488;VQSLOD=6.7948;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,32:33:75.25:1148,75,0	0/0:12,0:12:36.11:0,36,661	0/0:26,0:26:66.11:0,66,1276	0/0:23,0:23:60.67:0,61,1117	1/1:2,37:39:99:1598,105,0	0/0:26,0:26:72.25:0,72,1381	0/0:27,0:26:78.25:0,78,1473	1/1:1,32:33:96.24:1330,96,0	1/1:1,28:29:81.28:1240,81,0	1/1:1,28:29:84.27:1260,84,0	1/1:0,18:18:45.07:650,45,0	0/0:19,0:19:57.20:0,57,1091	0/0:36,0:36:99:0,102,1948	0/0:33,0:33:93.31:0,93,1726	1/1:0,35:35:93.32:1424,93,0	1/1:3,33:36:99:1510,99,0	0/0:29,0:28:87.28:0,87,1644	1/1:1,8:9:24.08:367,24,0	1/1:0,23:23:69.22:1018,69,0	1/1:0,44:43:99:1792,120,0	1/1:0,27:27:66.22:1010,66,0	0/0:31,0:31:93.31:0,93,1746	0/0:25,0:25:75.26:0,75,1437	0/0:16,0:16:48.16:0,48,917	1/1:0,18:18:51.17:781,51,0	1/1:1,27:28:81.26:1211,81,0	1/1:0,31:31:90.31:1378,90,0	1/1:0,2:2:6.02:92,6,0
chr10	42167965	.	CAGAGAGAGAGGGGGGGGAGAGAGAG	C	6978.38	PASS	AB=1.000;AC=25;AF=0.463;AN=54;BaseQRankSum=4.063;DP=470;FS=0.000;HRun=0;HaplotypeScore=263.8987;InbreedingCoeff=0.4514;MQ=55.81;MQ0=35;MQRankSum=-4.558;QD=25.38;ReadPosRankSum=5.100;VQSLOD=3.1583;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:12:0.76:0,1,37	0/0:5,0:5:15.05:0,15,1075	0/1:19,0:10:0.64:1,0,360	0/0:22,0:15:11.42:0,11,378	1/1:18,0:18:7.29:130,7,0	0/0:20,0:20:30.02:0,30,618	0/0:23,0:22:21.05:0,21,450	1/1:14,0:13:12.04:247,12,0	1/1:6,0:6:9.03:299,9,0	1/1:27,3:26:69.20:2300,69,0	1/1:12,1:13:18.53:577,19,0	0/0:9,0:9:12.04:0,12,265	0/0:16,0:16:6.01:0,6,105	0/0:22,0:21:18.52:0,19,457	1/1:21,5:26:10.75:1315,11,0	1/1:17,0:19:1.67:342,2,0	0/1:22,0:13:99:131,0,965	1/1:2,0:2:3.01:94,3,0	0/1:11,0:9:10.01:70,0,10	1/1:33,0:32:12.63:207,13,0	./.	0/0:10,0:10:6.48:0,6,131	0/0:12,0:12:7.67:0,8,139	0/0:18,0:16:6.02:0,6,119	1/1:11,2:13:17.77:661,18,0	0/1:19,0:14:63.90:373,0,64	0/1:25,0:23:99:232,0,300	0/0:11,0:10:3.01:0,3,65
chr10	42167970	.	AGAGAGGGGGGG	A	6306.98	PASS	AB=0.984;AC=33;AF=0.611;AN=54;BaseQRankSum=6.330;DP=440;FS=0.000;HRun=0;HaplotypeScore=173.9270;InbreedingCoeff=0.4644;MQ=54.77;MQ0=36;MQRankSum=-6.739;QD=20.75;ReadPosRankSum=4.215;VQSLOD=3.7929;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:5,7:11:2.56:0,3,40	0/1:5,0:5:5.44:5,0,582	0/1:16,0:9:2.11:2,0,333	0/0:19,0:13:12.51:0,13,378	1/1:18,0:17:6.34:146,6,0	0/0:19,0:19:10.77:0,11,544	0/0:21,0:20:21.05:0,21,450	1/1:11,0:10:12.04:268,12,0	1/1:6,0:5:9.03:196,9,0	1/1:31,0:25:69.20:1610,69,0	1/1:13,0:12:18.53:430,19,0	0/0:9,0:9:12.04:0,12,254	0/0:14,0:14:5.24:0,5,103	0/0:20,0:19:18.48:0,18,433	1/1:24,0:23:11.02:736,11,0	1/1:18,0:16:1.69:372,2,0	0/1:20,0:14:99:116,0,417	1/1:2,0:2:3.01:74,3,0	1/1:11,0:9:12.04:249,12,0	1/1:29,0:28:11.26:203,11,0	./.	0/0:10,0:10:6.48:0,6,131	0/1:12,0:12:54.14:54,0,133	0/1:18,0:16:56.31:56,0,110	1/1:13,0:13:17.90:481,18,0	1/1:19,0:14:33.11:666,33,0	1/1:24,0:22:36.59:637,37,0	1/1:11,0:10:2.04:6,2,0
chr10	42167972	.	AGAGGGGGGG	A	6403.19	PASS	AB=1.000;AC=34;AF=0.630;AN=54;BaseQRankSum=5.904;DP=428;FS=0.000;HRun=0;HaplotypeScore=159.0215;InbreedingCoeff=0.3803;MQ=53.56;MQ0=37;MQRankSum=-6.394;QD=20.20;ReadPosRankSum=4.718;VQSLOD=4.0004;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:10:2.66:0,3,41	0/1:5,0:5:21.18:21,0,531	0/1:16,0:9:1.80:2,0,333	0/0:18,0:12:12.51:0,13,377	1/1:17,0:16:5.87:146,6,0	0/1:19,0:19:7.16:7,0,532	0/0:20,0:19:21.05:0,21,450	1/1:10,0:9:12.04:268,12,0	1/1:6,0:5:9.03:189,9,0	1/1:31,0:25:69.20:1527,69,0	1/1:13,0:12:18.06:420,18,0	0/0:9,0:9:12.04:0,12,253	0/0:13,0:13:5.05:0,5,103	0/0:19,0:18:18.48:0,18,432	1/1:22,0:21:11.38:667,11,0	1/1:18,0:16:1.71:363,2,0	0/1:25,0:16:83.49:83,0,329	1/1:2,0:2:3.01:74,3,0	1/1:6,4:8:12.04:291,12,0	1/1:27,2:28:9.97:238,10,0	./.	0/0:10,0:10:6.48:0,6,131	0/1:10,0:10:24.45:24,0,129	0/1:17,0:15:41.40:41,0,159	1/1:13,0:12:17.90:444,18,0	1/1:16,3:14:33.11:745,33,0	1/1:22,2:22:36.12:845,36,0	1/1:11,0:10:2.22:7,2,0
chr10	42167974	.	AGGGGGGG	A	6466.22	PASS	AB=0.921;AC=34;AF=0.630;AN=54;BaseQRankSum=6.795;DP=409;FS=2.759;HRun=8;HaplotypeScore=142.2406;InbreedingCoeff=0.3863;MQ=51.16;MQ0=39;MQRankSum=-4.897;QD=21.13;ReadPosRankSum=5.764;VQSLOD=0.7995;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:2.66:0,3,41	0/1:5,0:5:24.32:24,0,470	0/1:16,0:9:1.47:1,0,333	0/0:15,0:10:12.51:0,13,377	1/1:4,12:16:5.95:146,6,0	0/1:14,0:15:24.06:24,0,551	0/0:22,0:21:27.58:0,28,561	1/1:3,4:6:12.04:268,12,0	1/1:2,3:5:9.03:210,9,0	1/1:12,17:25:69.20:1556,69,0	1/1:4,8:12:18.06:427,18,0	0/0:7,0:7:15.52:0,16,305	0/1:14,0:14:31.98:32,0,115	0/0:17,0:16:13.41:0,13,528	1/1:9,11:19:11.39:685,11,0	1/1:11,5:16:1.70:409,2,0	0/1:11,0:15:71.03:71,0,281	1/1:1,1:2:3.01:74,3,0	1/1:7,0:6:12.04:258,12,0	1/1:5,25:28:9.84:218,10,0	./.	0/0:8,0:8:8.77:0,9,136	0/0:10,1:11:9.70:0,10,147	0/1:14,0:12:29.69:30,0,150	1/1:6,7:12:17.90:423,18,0	1/1:6,8:13:33.11:771,33,0	1/1:3,20:22:36.12:831,36,0	1/1:2,7:8:2.37:8,2,0
chr10	42167975	.	G	GA	983.33	PASS	AB=0.963;AC=30;AF=0.577;AN=52;BaseQRankSum=3.157;DP=397;FS=3.984;HRun=1;HaplotypeScore=145.7337;InbreedingCoeff=0.6573;MQ=51.38;MQ0=41;MQRankSum=-4.914;QD=4.06;ReadPosRankSum=5.009;VQSLOD=0.6400;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,0:8:2.89:18,3,0	0/0:5,0:5:10.57:0,11,165	0/0:15,0:8:14.60:0,15,150	0/0:15,0:10:11.25:0,11,161	1/1:15,0:14:5.96:46,6,0	0/1:15,0:15:0.75:1,0,121	0/0:24,0:21:24.51:0,25,191	1/1:5,0:4:11.37:61,11,0	1/1:5,0:4:0.93:20,1,0	1/1:28,2:24:41.44:271,41,0	1/1:11,1:11:17.13:122,17,0	0/0:9,0:9:7.34:0,7,48	0/0:15,0:14:6.81:0,7,30	0/0:18,1:17:16.61:0,17,137	1/1:19,0:18:15.86:120,16,0	1/1:16,0:14:11.64:103,12,0	0/1:23,2:15:15.50:16,0,69	1/1:2,0:2:2.92:17,3,0	1/1:6,0:4:3.03:10,3,0	1/1:29,1:28:8.31:50,8,0	./.	0/0:8,0:8:5.78:0,6,49	0/0:12,0:12:8.30:0,8,41	0/0:15,0:12:13.79:0,14,89	1/1:10,1:10:16.83:92,17,0	1/1:17,1:13:22.47:127,22,0	1/1:23,1:22:14.42:97,14,0	./.
chr10	42167982	.	GA	G	173.34	PASS	AB=0.965;AC=22;AF=0.393;AN=56;BaseQRankSum=1.980;DP=414;FS=2.675;HRun=1;HaplotypeScore=153.3969;InbreedingCoeff=0.2097;MQ=34.93;MQ0=42;MQRankSum=-0.980;QD=0.70;ReadPosRankSum=1.885;VQSLOD=-0.7333;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:12,0:11:0.13:0,0,0	0/0:5,0:5:10.44:0,10,153	0/0:11,0:4:5.99:0,6,51	0/0:10,0:5:11.96:0,12,99	1/1:14,0:13:0.89:3,1,0	1/1:8,3:10:8.60:61,9,0	0/1:18,3:18:37.97:38,0,88	0/0:10,0:8:10.70:0,11,45	1/1:5,0:4:1.97:6,2,0	0/0:26,0:20:7.34:0,7,56	1/1:12,0:11:3.38:21,3,0	0/1:9,1:10:23.87:28,0,24	0/1:18,0:17:9.49:9,0,59	0/1:17,2:18:17:17,0,31	0/1:18,0:17:4.41:11,0,4	1/1:13,0:11:2.34:13,2,0	0/1:23,1:14:1.67:92,0,2	0/0:1,0:1:0.47:0,0,1	0/0:13,0:11:15.89:0,16,94	0/1:33,0:31:3.19:3,0,20	0/1:14,0:10:0.01:0,0,0	0/1:12,0:12:0.11:0,0,18	0/0:19,0:18:12.88:0,13,115	0/0:14,0:11:10.76:0,11,64	1/1:11,0:10:3.99:11,4,0	0/0:21,0:16:17.57:0,18,112	0/0:26,0:24:2.01:0,2,37	0/0:11,0:10:5.87:0,6,35
chr10	42168010	.	G	GA	448.71	PASS	AB=0.881;AC=9;AF=0.161;AN=56;BaseQRankSum=8.045;DP=581;FS=2.705;HRun=1;HaplotypeScore=198.2954;InbreedingCoeff=0.1696;MQ=37.09;MQ0=40;MQRankSum=-5.796;QD=3.90;ReadPosRankSum=-0.283;VQSLOD=-0.0665;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,0:10:0.39:2,0,0	0/0:4,0:4:11.87:0,12,130	0/0:45,0:8:18.05:0,18,219	0/0:62,0:8:18.05:0,18,216	0/0:38,0:38:17.86:0,18,323	0/0:10,0:10:22.62:0,23,272	0/0:20,0:18:39.08:0,39,452	0/0:26,0:19:54.06:0,54,647	0/1:16,0:15:27.19:27,0,140	0/1:21,3:23:99:253,0,433	0/1:16,3:19:48.71:49,0,200	0/0:14,0:14:27.97:0,28,345	0/0:21,0:20:43.14:0,43,447	0/0:17,0:16:27.03:0,27,316	1/1:19,6:24:16.82:174,17,0	0/0:22,0:22:12.59:0,13,95	0/0:21,0:12:14.70:0,15,201	0/1:3,1:4:27.57:28,0,32	0/0:13,0:13:35.12:0,35,336	0/0:28,0:28:3.55:0,4,124	0/0:12,0:11:8.53:0,9,83	0/0:17,0:17:24.05:0,24,290	0/0:21,0:20:37.20:0,37,412	0/0:18,0:15:5.62:0,6,155	0/1:14,3:17:50.71:51,0,197	0/0:24,0:24:59.68:0,60,674	0/0:24,0:24:40.60:0,41,558	0/0:7,0:7:12.04:0,12,152
chr10	42168016	.	AAG	A	5002.67	PASS	AB=0.968;AC=41;AF=0.732;AN=56;BaseQRankSum=-0.035;DP=584;FS=11.244;HRun=0;HaplotypeScore=186.7604;InbreedingCoeff=0.1238;MQ=38.89;MQ0=36;MQRankSum=0.378;QD=11.24;ReadPosRankSum=-1.638;VQSLOD=3.5766;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,1:9:8.03:73,8,0	0/0:3,0:3:8.75:0,9,87	0/0:55,0:13:26.70:0,27,337	0/0:81,0:14:25.81:0,26,249	1/1:14,18:32:45.01:471,45,0	1/1:11,0:10:15.93:65,16,0	0/1:20,0:19:40.92:41,0,70	1/1:20,3:18:33.10:405,33,0	0/1:11,5:16:9.80:226,0,10	1/1:12,10:22:51.16:622,51,0	1/1:8,11:19:35.77:328,36,0	0/1:14,0:14:19.97:30,0,20	0/1:19,0:19:41.98:45,0,42	0/1:16,0:16:29.54:37,0,30	1/1:7,17:24:50.57:389,51,0	1/1:3,15:19:38.38:314,38,0	0/1:21,0:15:15.59:55,0,16	1/1:3,0:4:1.44:35,1,0	1/1:7,0:7:11.76:105,12,0	1/1:16,10:26:43.56:345,44,0	1/1:11,0:11:18.08:146,18,0	1/1:18,0:18:4.74:44,5,0	0/1:20,0:20:31.43:31,0,86	0/1:17,0:17:29.19:29,0,32	1/1:7,9:16:32.85:339,33,0	1/1:16,5:21:22.24:420,22,0	1/1:20,5:25:28.61:373,29,0	0/1:7,0:7:15.62:35,0,16
chr10	42168020	.	G	GAGAA	2325.18	PASS	AB=1.000;AC=18;AF=0.321;AN=56;BaseQRankSum=-4.394;DP=622;FS=6.207;HRun=0;HaplotypeScore=222.5042;InbreedingCoeff=0.5977;MQ=39.89;MQ0=37;MQRankSum=3.218;QD=13.29;ReadPosRankSum=2.507;VQSLOD=2.1945;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:8.73:0,9,43	0/0:3,0:3:8.93:0,9,99	0/0:70,0:17:15.58:0,16,436	0/0:92,0:19:35.56:0,36,436	0/0:32,0:32:49.73:0,50,431	0/1:11,0:10:13.91:103,0,14	1/1:20,1:20:5.35:397,5,0	0/0:21,0:15:41.92:0,42,370	0/1:17,0:17:0.81:1,0,220	0/0:22,0:21:37.44:0,37,464	0/0:18,0:18:44.19:0,44,343	1/1:16,0:16:41.12:289,41,0	1/1:19,0:20:25.21:371,25,0	1/1:16,1:18:38.81:360,39,0	0/0:25,0:25:21.99:0,22,299	0/0:23,0:23:43.82:0,44,312	0/0:22,0:16:1.72:0,2,277	0/1:2,0:2:0.97:1,0,25	0/1:8,0:8:28.86:29,0,102	0/0:28,0:28:28.88:0,29,266	0/0:10,0:11:20.28:0,20,153	1/1:17,0:18:44.44:360,44,0	1/1:19,2:20:9.37:366,9,0	1/1:18,2:19:10.78:232,11,0	0/0:17,0:17:30.56:0,31,264	0/0:21,0:21:11.62:0,12,352	0/0:24,0:24:3.32:0,3,279	0/0:6,0:6:1.56:0,2,64
chr10	42168055	.	GAGGGGT	G	5662.11	PASS	AB=0.909;AC=21;AF=0.375;AN=56;BaseQRankSum=11.853;DP=749;FS=38.555;HRun=0;HaplotypeScore=346.9769;InbreedingCoeff=-0.6044;MQ=56.68;MQ0=5;MQRankSum=-11.073;QD=11.87;ReadPosRankSum=-3.001;VQSLOD=2.6792;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:7,2:9:99:291,0,189	0/0:4,0:4:12.04:0,12,433	0/0:72,0:38:90.01:0,90,2380	0/0:107,0:43:59.34:0,59,1607	0/1:38,6:44:99:518,0,1947	0/1:22,1:23:99:217,0,1764	0/1:22,1:22:99:138,0,1427	0/0:23,0:22:66.19:0,66,1872	0/1:21,1:22:99:301,0,1275	0/1:38,0:38:99:399,0,2514	0/1:24,0:24:99:187,0,1393	0/1:15,5:20:99:291,0,1450	0/1:23,6:29:99:315,0,2217	0/1:16,8:24:99:484,0,1459	0/0:29,0:29:63:0,63,1823	0/1:25,4:29:99:277,0,1822	0/1:16,2:18:99:326,0,478	0/1:2,0:2:69.53:70,0,102	0/0:13,0:13:30.87:0,31,1080	0/1:35,3:38:99:508,0,1880	0/1:7,1:8:82.05:82,0,529	0/0:23,0:23:14.34:0,14,1896	0/1:15,6:21:99:355,0,1258	0/1:20,0:19:99:133,0,1143	0/1:28,0:28:99:268,0,1672	0/1:21,1:22:99:199,0,1293	0/1:29,1:30:99:213,0,1980	0/1:4,1:5:91.40:91,0,267
chr10	42168057	.	GGGGT	G	1966.43	PASS	AB=0.965;AC=20;AF=0.357;AN=56;BaseQRankSum=13.819;DP=737;FS=25.749;HRun=0;HaplotypeScore=324.8708;InbreedingCoeff=-0.5609;MQ=58.45;MQ0=6;MQRankSum=-10.205;QD=3.57;ReadPosRankSum=-2.906;VQSLOD=0.7836;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:9,0:9:99:131,0,147	0/0:4,0:4:12.04:0,12,348	0/0:76,0:40:61.40:0,61,2143	0/1:99,2:42:2.19:2,0,1430	0/1:44,0:44:99:108,0,1798	0/1:23,0:23:34.55:35,0,1422	0/1:23,0:21:51.19:51,0,1163	0/0:22,0:21:66.17:0,66,1619	0/1:21,0:21:57.40:57,0,1130	0/1:27,10:37:99:411,0,2045	0/1:16,7:23:99:188,0,1187	0/1:20,0:19:91.86:92,0,1152	0/1:29,0:29:89.76:90,0,1806	0/1:24,0:24:99:171,0,1212	0/0:29,0:29:63.04:0,63,1542	0/1:29,0:29:70.64:71,0,1559	0/1:16,0:16:66.34:66,0,430	0/0:1,0:1:3.01:0,3,87	0/0:14,0:14:38.95:0,39,992	0/1:38,0:38:99:133,0,1707	0/1:8,0:8:12.14:12,0,480	0/0:21,1:22:14.29:0,14,1571	0/1:19,0:19:99:121,0,1003	0/0:18,0:17:8.23:0,8,941	0/1:19,9:28:99:278,0,1349	0/1:22,0:22:38.36:38,0,1043	0/1:30,0:30:34.04:34,0,1690	0/1:5,0:5:32.21:32,0,229
chr10	42168068	.	GA	G	5447.88	PASS	AB=0.717;AC=23;AF=0.411;AN=56;BaseQRankSum=4.890;DP=819;FS=33.157;HRun=3;HaplotypeScore=286.2826;InbreedingCoeff=-0.6947;MQ=56.84;MQ0=13;MQRankSum=-7.671;QD=9.46;ReadPosRankSum=-4.903;VQSLOD=0.1401;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:3,8:11:55.85:266,0,56	0/0:7,0:7:21.07:0,21,299	0/0:83,1:38:79.04:0,79,1036	0/0:100,2:37:38.67:0,39,711	0/1:29,19:48:99:382,0,749	0/1:17,8:25:99:128,0,688	0/1:14,13:25:99:217,0,425	0/1:23,10:33:99:220,0,731	0/1:12,8:20:99:203,0,388	0/1:24,15:38:99:366,0,836	0/1:15,8:23:99:185,0,474	0/1:14,10:23:99:264,0,534	0/1:19,11:29:99:248,0,729	0/1:16,10:25:99:264,0,508	0/0:31,0:31:44.76:0,45,525	0/1:19,13:32:99:393,0,579	0/1:9,7:17:99:236,0,147	0/1:1,3:3:34.11:60,0,34	0/0:14,2:16:7.63:0,8,535	0/1:23,18:41:99:502,0,631	0/1:5,5:10:89.98:90,0,144	0/1:21,2:22:6.07:6,0,664	0/1:13,12:24:99:247,0,459	0/1:16,5:20:40.80:41,0,331	0/1:17,13:30:99:359,0,593	0/1:12,13:25:99:394,0,440	0/1:25,10:35:99:324,0,809	0/1:4,2:5:52.92:53,0,101
chr10	42168069	.	A	AAAGAGAAAGAGAAGAG	27350.59	PASS	AB=0.995;AC=41;AF=0.732;AN=56;BaseQRankSum=-0.407;DP=827;FS=15.357;HRun=0;HaplotypeScore=415.4584;InbreedingCoeff=0.1624;MQ=56.74;MQ0=14;MQRankSum=-6.281;QD=43.21;ReadPosRankSum=2.393;VQSLOD=2.4301;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:11:8.47:390,8,0	0/0:7,0:7:21.07:0,21,737	0/0:81,0:37:52.84:0,53,943	0/0:103,0:37:30.43:0,30,698	1/1:49,0:49:99:1909,108,0	0/1:25,0:25:99:364,0,304	0/1:28,0:26:99:416,0,161	1/1:37,0:37:99:1546,102,0	1/1:20,0:20:57.14:1188,57,0	1/1:39,0:38:99:3557,109,0	1/1:23,0:23:60.16:1846,60,0	0/1:24,0:23:86.83:796,0,87	0/1:30,0:29:99:798,0,134	0/1:26,0:25:71.03:1211,0,71	1/1:16,15:35:28.30:927,28,0	1/1:31,0:31:87.29:1673,87,0	0/1:16,0:16:48.64:269,0,49	1/1:4,0:3:8.24:88,8,0	1/1:16,0:16:36.12:795,36,0	1/1:40,0:40:79.88:1755,80,0	1/1:11,0:10:18.06:294,18,0	0/1:22,0:22:99:623,0,124	0/1:27,0:26:99:980,0,170	0/1:21,0:20:99:115,0,118	1/1:30,0:30:78.19:2423,78,0	1/1:26,0:26:66.07:1139,66,0	1/1:34,0:35:59.40:1924,59,0	1/1:6,0:5:15.04:326,15,0
chr10	42168074	.	G	GA	7035.55	PASS	AB=0.714;AC=16;AF=0.286;AN=56;BaseQRankSum=-3.787;DP=840;FS=8.548;HRun=2;HaplotypeScore=280.2022;InbreedingCoeff=-0.3546;MQ=55.94;MQ0=16;MQRankSum=-1.399;QD=16.79;ReadPosRankSum=4.948;VQSLOD=3.8041;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:11,2:13:54.52:55,0,296	0/0:8,0:8:24.08:0,24,297	0/0:80,0:32:64.09:0,64,755	0/0:104,0:36:25.97:0,26,708	0/1:28,22:50:99:712,0,606	0/0:28,0:28:75.21:0,75,908	0/0:29,0:27:66.11:0,66,784	0/1:28,14:41:99:591,0,558	0/1:12,9:21:99:391,0,189	0/1:18,23:40:99:981,0,176	0/1:10,12:22:99:449,0,137	0/0:23,0:22:66.21:0,66,811	0/0:34,0:33:93.23:0,93,1108	0/0:26,0:25:65.63:0,66,747	0/1:27,8:35:43.29:290,0,43	0/1:15,14:29:99:585,0,353	0/0:15,0:15:39.08:0,39,470	0/1:4,1:4:34.38:34,0,63	0/1:4,9:13:3.12:390,0,3	0/1:20,17:37:99:647,0,511	0/1:7,4:10:68.16:68,0,129	0/0:23,0:22:56.71:0,57,664	0/0:26,0:25:71.96:0,72,866	0/0:22,0:21:19.68:0,20,302	0/1:18,13:31:99:466,0,367	0/1:17,11:28:99:397,0,475	0/1:14,21:35:99:825,0,336	0/1:4,2:5:21.95:154,0,22
chr10	42168097	.	GAAA	G	5538.80	PASS	AB=0.887;AC=24;AF=0.429;AN=56;BaseQRankSum=6.268;DP=818;FS=3.168;HRun=7;HaplotypeScore=272.5855;InbreedingCoeff=-0.7158;MQ=47.40;MQ0=16;MQRankSum=-8.819;QD=8.40;ReadPosRankSum=1.671;VQSLOD=-0.6283;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:13,1:14:9.90:10,0,356	0/0:10,0:10:30.10:0,30,665	0/0:62,2:23:37.26:0,37,689	0/0:75,0:20:41.66:0,42,674	0/1:44,2:46:99:268,0,887	0/1:27,0:27:99:312,0,293	0/1:28,2:28:99:180,0,470	0/1:34,8:41:99:319,0,668	0/1:19,3:22:99:216,0,358	0/1:40,8:47:99:301,0,746	0/1:15,3:18:99:174,0,372	0/1:16,8:23:99:301,0,347	0/1:29,10:38:99:401,0,668	0/1:18,8:25:99:298,0,366	0/1:29,7:36:99:263,0,271	0/1:31,3:34:99:413,0,689	0/1:12,2:15:99:219,0,213	0/1:6,0:5:0.60:1,0,95	0/1:19,0:18:81.71:82,0,204	0/1:34,5:39:99:482,0,747	0/0:10,0:9:26.94:0,27,290	0/1:18,5:22:99:351,0,219	0/1:20,4:23:99:187,0,422	0/1:21,3:23:58.61:59,0,221	0/1:20,7:27:99:242,0,665	0/1:26,1:27:11.05:11,0,730	0/1:33,3:36:99:429,0,600	0/1:13,0:12:20.05:20,0,214
chr10	42168098	.	A	AG	1973.24	PASS	AB=0.901;AC=22;AF=0.393;AN=56;BaseQRankSum=8.948;DP=812;FS=2.984;HRun=1;HaplotypeScore=258.2719;InbreedingCoeff=-0.6561;MQ=47.57;MQ0=15;MQRankSum=-10.414;QD=3.11;ReadPosRankSum=0.066;VQSLOD=-0.4376;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:13,1:14:0.49:0,0,107	0/0:10,0:10:30.10:0,30,419	0/0:63,0:23:50.89:0,51,579	0/0:74,0:20:37.93:0,38,511	0/1:35,11:46:99:129,0,257	0/1:18,10:28:46.71:281,0,47	0/1:24,4:26:88.53:89,0,102	0/1:42,0:41:87.78:88,0,166	0/1:18,4:22:97.04:126,0,97	0/1:47,0:46:99:167,0,117	0/1:18,0:18:24.56:25,0,89	0/1:24,0:23:63.48:63,0,77	0/1:37,1:37:57.18:57,0,174	0/1:25,1:25:63.20:105,0,63	0/1:36,0:36:43.39:43,0,46	0/1:27,7:34:99:119,0,174	0/1:13,2:15:46.32:96,0,46	0/0:7,0:6:8.68:0,9,35	0/1:14,4:17:45.62:46,0,54	0/1:30,8:38:99:139,0,161	0/0:10,0:9:21.80:0,22,84	0/1:18,6:23:18.34:121,0,18	0/1:25,0:24:62.69:64,0,63	0/1:19,3:21:37.14:37,0,50	0/1:27,0:27:2.16:2,0,131	0/1:24,2:27:80.68:81,0,131	0/1:26,11:37:99:220,0,128	0/1:11,1:12:30.32:30,0,72
chr10	42168100	.	A	AG	268.21	PASS	AB=0.831;AC=10;AF=0.179;AN=56;BaseQRankSum=6.247;DP=808;FS=2.010;HRun=0;HaplotypeScore=266.5984;InbreedingCoeff=-0.2035;MQ=48.59;MQ0=14;MQRankSum=-6.821;QD=0.96;ReadPosRankSum=3.077;VQSLOD=2.3475;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:13,1:14:27.47:0,27,458	0/0:10,0:10:30.10:0,30,419	0/0:59,0:21:43.37:0,43,527	0/0:69,1:19:44.88:0,45,492	0/1:38,11:49:0.42:0,0,1017	0/1:18,10:28:99:162,0,381	0/1:25,4:27:20.46:20,0,533	0/0:40,0:40:66.02:0,66,1074	0/1:16,4:20:10.76:11,0,428	0/0:47,0:46:68.37:0,68,1108	0/0:18,0:18:40.51:0,41,471	0/0:24,0:23:44.13:0,44,541	0/0:37,1:37:69.38:0,69,927	0/0:26,0:25:50.85:0,51,546	0/0:35,0:35:34.88:0,35,378	0/1:27,7:34:21.41:21,0,769	0/1:13,2:15:27.09:27,0,312	0/0:7,0:6:17.77:0,18,176	0/1:14,4:17:12.56:13,0,426	0/1:31,8:39:32.06:32,0,808	0/0:11,0:10:30.08:0,30,395	0/0:20,4:23:32.58:0,33,407	0/0:25,0:24:53.21:0,53,585	0/0:21,2:22:23.26:0,23,369	0/0:29,0:29:66.89:0,67,830	0/0:24,2:26:9.68:0,10,791	0/1:25,11:36:99:104,0,634	0/1:11,1:12:15.34:15,0,381
chr10	42168968	.	TATG	T	7993.26	PASS	AC=34;AF=0.654;AN=52;BaseQRankSum=-6.870;DP=735;FS=4.956;HRun=0;HaplotypeScore=124.8312;InbreedingCoeff=0.9439;MQ=64.60;MQ0=0;MQRankSum=0.773;QD=15.80;ReadPosRankSum=3.713;VQSLOD=4.0285;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:26:3.01:0,3,43	0/0:9,0:17:18.06:0,18,235	./.	./.	1/1:17,16:33:30.07:393,30,0	1/1:13,16:29:30.10:393,30,0	1/1:8,13:21:18.06:236,18,0	0/0:26,0:26:18.06:0,18,239	1/1:14,18:32:33.11:432,33,0	1/1:26,17:43:51.14:640,51,0	1/1:6,10:16:27.04:327,27,0	1/1:11,14:25:45.10:569,45,0	1/1:14,29:43:63.20:825,63,0	1/1:10,21:31:30.10:393,30,0	1/1:15,19:34:57.18:745,57,0	1/1:26,26:52:66.21:865,66,0	1/1:12,0:20:14.70:96,15,0	1/1:6,11:17:30.05:374,30,0	0/0:11,0:17:21.07:0,21,291	0/0:21,0:28:24.07:0,24,329	0/0:12,0:18:18.06:0,18,235	1/1:16,23:39:48.07:604,48,0	1/1:13,12:25:27.03:354,27,0	1/1:11,13:24:27.09:354,27,0	1/1:9,13:22:30.10:393,30,0	0/0:19,0:32:39.10:0,39,490	0/0:17,0:40:50.72:0,51,674	0/0:1,0:4:6.02:0,6,78
chr10	42170216	.	TACACACACACACAC	T	2187.67	PASS	AB=0.922;AC=24;AF=0.429;AN=56;BaseQRankSum=5.398;DP=557;FS=0.907;HRun=0;HaplotypeScore=235.9881;InbreedingCoeff=0.3809;MQ=52.08;MQ0=13;MQRankSum=-4.002;QD=8.65;ReadPosRankSum=0.740;VQSLOD=2.6486;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:20:0.71:0,1,1	0/0:7,0:7:15.05:0,15,883	0/0:30,0:9:0.89:0,1,2	0/0:34,0:11:6.39:0,6,57	0/0:10,4:14:0.47:0,0,1	0/0:23,0:22:2.78:0,3,73	0/0:22,0:21:3.48:0,3,82	0/0:26,0:25:3.48:0,3,64	1/1:13,9:23:8.69:313,9,0	1/1:10,6:16:18.06:626,18,0	1/1:5,7:12:0.12:1,0,0	0/0:31,0:31:4.66:0,5,270	0/1:22,0:22:12.81:13,0,260	0/1:34,0:34:1.15:1,0,150	0/0:12,5:17:0:0,0,0	0/1:6,5:11:99:112,0,140	0/0:19,0:20:24.08:0,24,967	1/1:4,3:6:3.01:111,3,0	1/1:13,0:15:6.02:195,6,0	1/1:12,0:18:1.51:4,2,0	0/1:13,0:12:0:0,0,0	0/0:20,0:20:5.76:0,6,163	0/0:27,0:27:3.01:0,3,64	0/0:11,0:11:0:0,0,0	1/1:9,11:19:0.47:1,0,0	1/1:16,0:22:18.06:585,18,0	1/1:22,0:25:9.03:270,9,0	1/1:14,0:13:3.01:98,3,0
chr10	42170252	.	CACACACACGT	C	1790.38	PASS	AB=0.901;AC=18;AF=0.333;AN=54;BaseQRankSum=6.907;DP=523;FS=0.000;HRun=0;HaplotypeScore=175.5853;InbreedingCoeff=-0.1947;MQ=37.66;MQ0=27;MQRankSum=-5.464;QD=6.76;ReadPosRankSum=4.310;VQSLOD=2.5071;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:32:21.20:0,21,218	0/1:10,0:10:0.66:1,0,591	0/0:48,0:5:8.67:0,9,75	0/0:41,0:7:18.06:0,18,250	0/0:11,0:11:6.49:0,6,63	1/1:2,14:15:1.15:100,1,0	0/0:3,16:18:0.89:0,1,3	0/0:18,0:16:43.23:0,43,424	0/1:20,0:20:72.60:73,0,149	0/1:19,0:19:99:158,0,286	0/0:13,0:13:8.06:0,8,83	0/1:4,18:22:18.21:456,0,18	0/1:5,19:24:23.46:714,0,23	1/1:3,22:25:5.97:130,6,0	0/0:15,0:14:3.01:0,3,37	0/1:18,0:18:27.89:28,0,139	0/1:24,0:24:16.32:16,0,200	0/1:6,0:5:11.83:12,0,64	0/1:10,0:9:38.04:38,0,136	0/1:17,0:17:0.14:0,0,1	./.	0/0:4,14:18:1.66:0,2,6	0/1:0,18:18:0:0,0,0	0/0:3,9:12:2.98:0,3,31	0/0:20,0:19:3:0,3,29	0/1:17,0:17:99:139,0,240	0/1:12,0:11:41.80:42,0,255	0/1:7,0:4:22.09:22,0,55
chr10	42170258	.	CACGT	C	959.35	PASS	AB=1.000;AC=14;AF=0.250;AN=56;BaseQRankSum=1.750;DP=542;FS=3.528;HRun=0;HaplotypeScore=169.1309;InbreedingCoeff=0.5312;MQ=41.15;MQ0=24;MQRankSum=-2.969;QD=6.11;ReadPosRankSum=0.867;VQSLOD=2.8560;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:33:20.45:0,20,218	0/1:10,0:10:51.58:52,0,191	0/0:47,0:5:8.67:0,9,75	0/0:42,0:10:23.85:0,24,329	0/0:14,0:14:9.02:0,9,91	1/1:16,0:15:2.16:40,2,0	0/0:19,0:18:0.47:0,0,1	0/0:22,0:20:52.25:0,52,517	0/0:22,0:22:9.08:0,9,199	0/0:19,0:19:27.37:0,27,312	0/0:14,0:14:11.45:0,11,112	1/1:22,0:22:3.35:154,3,0	1/1:23,0:23:26.81:315,27,0	1/1:26,0:26:6.01:69,6,0	0/0:15,0:14:2.98:0,3,37	0/0:17,0:17:5.89:0,6,86	1/1:2,21:23:27.09:476,27,0	0/0:6,0:5:8.99:0,9,94	0/0:13,0:12:30.73:0,31,263	1/1:19,0:19:0.12:0,0,0	0/0:10,0:10:3.01:0,3,31	0/0:18,0:18:1.97:0,2,6	0/1:18,0:18:0:0,0,0	0/0:12,0:12:2.87:0,3,31	0/0:22,0:21:6.39:0,6,45	0/0:19,0:19:46.41:0,46,390	0/0:12,0:11:31.95:0,32,305	0/0:7,0:4:8.61:0,9,74
chr10	42170260	.	CGT	C	517.18	PASS	AB=1.000;AC=12;AF=0.222;AN=54;BaseQRankSum=3.126;DP=544;FS=0.763;HRun=0;HaplotypeScore=164.9402;InbreedingCoeff=0.5768;MQ=41.26;MQ0=21;MQRankSum=-2.609;QD=3.80;ReadPosRankSum=1.185;VQSLOD=2.6536;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:34:20.43:0,20,218	0/1:8,0:8:12.71:13,0,123	0/0:47,1:6:11.68:0,12,119	0/0:42,0:10:23.80:0,24,329	0/0:14,0:14:8.98:0,9,90	1/1:15,0:15:2.56:27,3,0	0/1:19,0:18:0:0,0,0	0/0:22,0:21:55.25:0,55,547	0/0:21,0:21:20.92:0,21,225	0/0:20,0:20:32.46:0,32,341	0/0:15,0:15:11.74:0,12,112	1/1:20,1:21:13.95:101,14,0	1/1:21,2:23:23.92:218,24,0	1/1:23,3:26:6:55,6,0	0/0:16,0:15:2.98:0,3,37	0/0:17,0:17:7.60:0,8,100	1/1:23,0:23:26.98:257,27,0	0/0:5,0:5:9.03:0,9,106	0/0:13,0:12:31.25:0,31,291	0/0:21,0:21:2.73:0,3,42	0/0:9,0:9:3.01:0,3,31	0/0:16,2:18:1.98:0,2,6	./.	0/0:10,2:12:2.90:0,3,31	0/0:23,0:22:5.92:0,6,45	0/0:19,0:19:48.06:0,48,468	0/0:12,0:11:32.99:0,33,321	0/0:6,0:4:9.01:0,9,88
chr10	42170272	.	T	TGC	2825.96	PASS	AB=1.000;AC=18;AF=0.333;AN=54;BaseQRankSum=-5.258;DP=570;FS=27.855;HRun=0;HaplotypeScore=168.5491;InbreedingCoeff=0.5810;MQ=42.18;MQ0=18;MQRankSum=1.743;QD=15.44;ReadPosRankSum=0.501;VQSLOD=1.8740;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,27:36:23.83:389,24,0	0/0:7,0:7:18.02:0,18,192	0/0:58,0:7:5.17:0,5,74	0/0:51,1:10:24.43:0,24,245	0/1:19,0:19:13.36:13,0,34	0/0:13,0:13:2.21:0,2,7	0/0:19,0:19:8.99:0,9,74	1/1:8,19:27:56.81:752,57,0	0/0:22,0:22:5.54:0,6,120	0/1:20,0:20:27.68:28,0,142	0/0:14,0:14:11.33:0,11,56	0/0:22,0:22:11.68:0,12,91	0/0:23,0:23:32.55:0,33,266	0/0:30,0:30:6.01:0,6,59	0/0:16,0:16:2.92:0,3,17	0/0:17,0:17:14.47:0,14,78	0/0:24,0:24:20.35:0,20,165	0/0:4,0:4:8.70:0,9,50	1/1:1,10:11:31.64:464,32,0	1/1:3,18:22:5.08:29,5,0	1/1:3,7:10:3.01:53,3,0	0/0:16,0:16:6:0,6,57	./.	0/0:13,0:13:3:0,3,41	0/0:21,0:21:2.29:0,2,21	1/1:1,18:19:46.02:678,46,0	1/1:3,10:12:35.46:468,35,0	1/1:1,2:3:9.03:134,9,0
chr10	42170282	.	CAGAGAGAGAGAGAG	C	727.89	PASS	AB=0.964;AC=20;AF=0.455;AN=44;BaseQRankSum=4.316;DP=519;FS=13.421;HRun=0;HaplotypeScore=204.3591;InbreedingCoeff=0.3207;MQ=43.61;MQ0=16;MQRankSum=-1.383;QD=3.62;ReadPosRankSum=3.514;VQSLOD=1.8966;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	0/0:4,0:6:9.03:0,9,238	./.	./.	./.	1/1:12,0:12:0.47:1,0,0	0/0:19,0:19:15.05:0,15,946	0/0:24,0:22:4.83:0,5,43	1/1:18,2:20:3.01:97,3,0	1/1:12,0:15:9.03:293,9,0	1/1:12,0:12:2.98:21,3,0	0/0:23,0:25:9.03:0,9,327	0/0:23,0:25:15.52:0,16,587	1/1:22,0:25:2.13:85,2,0	./.	1/1:9,2:13:3.01:99,3,0	0/0:23,0:23:9.50:0,10,255	0/0:6,0:6:0.89:0,1,2	0/1:15,0:16:1.31:52,0,1	0/1:21,0:21:0.08:18,0,0	0/0:11,0:10:2.99:0,3,24	0/0:13,0:15:5.99:0,6,160	./.	1/1:10,1:14:2.74:35,3,0	1/1:11,0:16:1.40:3,1,0	0/1:19,0:21:43.87:101,0,44	0/1:14,0:12:55.06:55,0,72	0/0:3,0:3:2.99:0,3,23
chr10	42171295	.	CT	C	7994.31	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=8.958;DP=614;FS=6.055;HRun=10;HaplotypeScore=66.6066;InbreedingCoeff=0.9811;MQ=77.19;MQ0=4;MQRankSum=-1.618;QD=19.84;ReadPosRankSum=3.845;VQSLOD=5.8103;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,24:31:46.59:527,47,0	1/1:1,13:14:35.99:313,36,0	0/0:24,1:15:12.69:0,13,189	0/0:29,0:25:39.33:0,39,315	1/1:5,23:28:32.54:499,33,0	0/0:21,0:21:60.13:0,60,640	0/0:11,2:13:7.03:0,7,306	1/1:11,13:24:48.77:407,49,0	1/1:7,14:21:38.98:339,39,0	1/1:0,25:25:74.97:648,75,0	1/1:2,24:26:62.05:544,62,0	0/0:17,0:17:47.94:0,48,483	0/0:29,0:29:55.76:0,56,819	0/0:25,0:25:37.86:0,38,623	1/1:3,29:32:83.98:729,84,0	1/1:0,24:24:53.99:469,54,0	1/1:3,6:9:17.99:156,18,0	1/1:1,9:10:23.99:208,24,0	1/1:5,15:20:44.95:386,45,0	1/1:5,23:28:62.87:531,63,0	1/1:0,17:17:44.99:391,45,0	0/0:17,0:17:42.09:0,42,449	0/0:11,0:11:30.04:0,30,318	0/0:23,0:24:72.01:0,72,768	1/1:2,15:17:35.98:313,36,0	1/1:6,26:32:77.97:676,78,0	1/1:2,32:34:74.97:651,75,0	1/1:1,10:11:23.98:208,24,0
chr10	42173442	.	T	TGGG	6368.84	PASS	AB=0.684;AC=33;AF=0.589;AN=56;BaseQRankSum=6.431;DP=415;FS=15.333;HRun=7;HaplotypeScore=73.2513;InbreedingCoeff=0.8703;MQ=59.11;MQ0=18;MQRankSum=-6.861;QD=25.89;ReadPosRankSum=-1.575;VQSLOD=1.3108;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,13:18:36.10:658,36,0	0/0:5,0:5:15.05:0,15,205	0/0:23,0:15:39.13:0,39,523	0/0:17,0:9:16.68:0,17,219	1/1:10,6:15:18.06:373,18,0	0/0:20,0:20:30.05:0,30,409	0/0:12,0:10:27.09:0,27,367	1/1:9,4:11:15.04:232,15,0	1/1:6,8:14:24.08:466,24,0	0/1:7,5:13:22.88:252,0,23	1/1:10,7:15:24.08:497,24,0	0/0:16,0:15:42.13:0,42,557	0/0:15,0:14:39.10:0,39,532	0/0:13,0:13:23.65:0,24,327	1/1:7,9:16:21.07:407,21,0	1/1:3,9:13:27.06:461,27,0	1/1:2,0:24:65.74:507,66,0	1/1:6,3:6:12.04:249,12,0	1/1:10,7:17:27.06:483,27,0	1/1:8,1:9:3.01:57,3,0	1/1:3,5:8:9.03:186,9,0	0/0:9,0:9:18.05:0,18,246	0/0:11,0:11:24.08:0,24,327	0/0:28,0:27:63.18:0,63,841	1/1:10,10:19:27.05:494,27,0	1/1:16,4:18:30.08:531,30,0	1/1:5,6:10:18.06:369,18,0	1/1:3,2:5:9:147,9,0
chr10	42173649	.	G	GAA	8774.54	PASS	AB=1.000;AC=33;AF=0.589;AN=56;BaseQRankSum=-0.815;DP=478;FS=12.745;HRun=9;HaplotypeScore=71.0516;InbreedingCoeff=0.9064;MQ=77.24;MQ0=1;MQRankSum=-1.381;QD=26.83;ReadPosRankSum=-0.170;VQSLOD=3.1143;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:34:75.11:723,75,0	0/0:9,0:9:18.04:0,18,192	0/1:22,0:16:9.39:9,0,154	0/0:27,0:20:32.31:0,32,291	1/1:2,21:23:60.02:809,60,0	0/0:21,0:20:63.16:0,63,670	0/0:6,0:6:15.03:0,15,160	1/1:9,0:27:56.53:521,57,0	1/1:1,12:16:43.33:579,43,0	1/1:2,13:15:39.12:579,39,0	1/1:1,19:22:66.17:951,66,0	0/0:12,0:12:30.03:0,30,306	0/0:18,0:18:48.10:0,48,511	0/0:9,0:9:27.07:0,27,287	1/1:0,22:22:60.20:916,60,0	1/1:0,16:16:39.13:600,39,0	0/0:35,0:35:90.10:0,90,985	1/1:7,14:20:32.91:450,33,0	1/1:5,1:13:14.78:159,15,0	1/1:1,2:23:59.52:541,60,0	1/1:1,1:9:24.05:257,24,0	0/0:2,0:2:6.02:0,6,64	0/0:7,0:7:21.05:0,21,222	0/0:4,0:4:12.03:0,12,128	1/1:2,12:15:38.62:563,39,0	1/1:3,1:22:50.91:554,51,0	1/1:2,0:17:39.06:373,39,0	1/1:0,1:10:18.03:190,18,0
chr10	42173751	.	GC	G	5475.06	PASS	AB=0.938;AC=33;AF=0.589;AN=56;BaseQRankSum=-5.664;DP=447;FS=0.482;HRun=10;HaplotypeScore=61.7155;InbreedingCoeff=0.8825;MQ=74.52;MQ0=0;MQRankSum=-0.373;QD=17.83;ReadPosRankSum=3.806;VQSLOD=5.5209;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,36:43:88.53:782,89,0	0/0:6,0:6:15.04:0,15,166	0/0:13,0:12:26.98:0,27,266	0/1:14,1:13:0.97:1,0,171	1/1:6,15:22:56.01:472,56,0	0/0:18,0:18:22.44:0,22,150	0/0:4,0:13:11.53:0,12,70	1/1:7,15:22:41.94:360,42,0	1/1:0,10:10:26.99:234,27,0	1/1:3,15:19:44.02:370,44,0	1/1:9,9:18:38.92:330,39,0	0/0:15,0:16:25.36:0,25,168	0/0:5,0:6:2.84:0,3,14	0/0:5,0:12:5.68:0,6,29	1/1:3,22:25:53.99:469,54,0	1/1:4,8:12:29.99:260,30,0	0/0:8,0:28:66.34:0,66,440	1/1:3,12:15:38.98:338,39,0	1/1:6,10:16:29.99:260,30,0	1/1:5,10:15:38.98:338,39,0	1/1:1,24:25:47.83:416,48,0	0/0:1,0:7:8.80:0,9,53	0/0:10,0:10:7.10:0,7,46	0/0:3,0:10:11.50:0,12,58	1/1:0,13:14:29.03:240,29,0	1/1:1,8:9:20.99:182,21,0	1/1:1,15:16:29.99:260,30,0	1/1:2,8:11:20.03:162,20,0
chr10	42174687	.	T	TA	8412.51	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=-14.962;DP=616;FS=3.953;HRun=10;HaplotypeScore=81.6513;InbreedingCoeff=0.9341;MQ=79.39;MQ0=0;MQRankSum=-2.421;QD=22.99;ReadPosRankSum=-2.603;VQSLOD=4.6048;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,22:27:48.05:488,48,0	0/0:6,0:6:11.98:0,12,99	0/0:16,0:18:1.47:0,1,212	0/0:11,0:12:19.47:0,19,133	1/1:5,19:24:54.03:540,54,0	0/0:33,0:33:83.88:0,84,690	0/0:16,0:17:43.96:0,44,351	1/1:8,26:35:80.89:821,81,0	1/1:3,15:18:39.10:416,39,0	1/1:4,27:31:81.17:846,81,0	1/1:10,10:20:8.36:271,8,0	0/0:18,0:18:41.92:0,42,342	0/0:18,0:18:47.91:0,48,390	0/0:23,0:23:53.92:0,54,443	1/1:3,18:22:48.07:499,48,0	1/1:1,18:19:51.13:544,51,0	0/0:24,0:24:59.91:0,60,493	1/1:1,9:11:5.27:245,5,0	1/1:3,20:23:60.12:623,60,0	1/1:6,28:35:56.45:773,56,0	1/1:3,13:16:33.08:352,33,0	0/0:28,0:28:68.88:0,69,564	0/0:31,0:31:59.86:0,60,493	0/0:20,0:22:57.97:0,58,450	1/1:4,24:28:35.51:583,36,0	1/1:1,19:21:56.95:580,57,0	1/1:4,26:30:66.17:704,66,0	1/1:2,4:6:12.03:128,12,0
chr10	42175343	.	ATATATATATG	A	441.35	PASS	AB=1.000;AC=19;AF=0.731;AN=26;BaseQRankSum=-1.972;DP=82;FS=0.000;HRun=0;HaplotypeScore=32.0827;InbreedingCoeff=-0.2444;MQ=66.49;MQ0=6;MQRankSum=1.083;QD=5.88;ReadPosRankSum=-2.528;VQSLOD=0.0188;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	0/1:8,0:3:0:0,0,0	./.	./.	./.	1/1:8,0:5:0.16:16,0,0	1/1:1,0:1:3:25,3,0	1/1:4,0:4:6:51,6,0	./.	./.	0/1:5,0:5:0:0,0,0	0/1:3,0:3:14.51:19,0,15	0/1:4,0:4:14.12:14,0,47	./.	1/1:5,17:21:9.03:260,9,0	0/1:7,0:6:29.58:61,0,30	0/1:3,0:2:10.30:19,0,10	./.	./.	./.	./.	./.	0/1:7,0:7:12.92:13,0,156	./.	1/1:2,0:2:2.96:24,3,0	1/1:1,0:1:3.01:32,3,0
chr10	42175347	.	ATATATG	A	532.59	PASS	AB=1.000;AC=23;AF=0.885;AN=26;BaseQRankSum=-0.446;DP=76;FS=2.649;HRun=0;HaplotypeScore=22.4340;InbreedingCoeff=0.0940;MQ=54.05;MQ0=6;MQRankSum=-0.446;QD=8.45;ReadPosRankSum=-0.520;VQSLOD=0.7164;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:1,0:1:3:0,3,25	./.	./.	./.	./.	./.	1/1:7,0:4:5.92:39,6,0	1/1:1,0:1:3:25,3,0	1/1:4,0:4:6:51,6,0	./.	./.	1/1:0,5:5:3.01:69,3,0	1/1:4,0:4:8.01:52,8,0	1/1:3,0:3:2.97:20,3,0	./.	1/1:21,0:20:9.03:130,9,0	1/1:7,0:6:13.22:100,13,0	1/1:3,0:2:5.96:45,6,0	./.	./.	./.	./.	./.	0/1:5,0:5:10.36:24,0,10	./.	1/1:2,0:2:5.95:43,6,0	1/1:1,0:1:2.99:24,3,0
chr10	42175742	.	TC	T	876.86	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.688;DP=597;FS=0.729;HRun=4;HaplotypeScore=64.2866;InbreedingCoeff=0.9949;MQ=79.57;MQ0=0;MQRankSum=0.178;QD=30.24;ReadPosRankSum=1.733;VQSLOD=3.8321;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:93.29:0,93,1282	0/0:9,0:9:27.09:0,27,378	0/0:17,0:17:48.15:0,48,633	0/0:17,0:17:47.30:0,47,573	0/0:25,0:25:72.24:0,72,1007	0/0:38,0:38:99:0,111,1482	0/0:27,0:27:75.13:0,75,1002	0/0:36,0:36:99:0,108,1496	0/0:18,0:18:54.11:0,54,732	0/0:22,0:22:60.19:0,60,810	0/0:23,0:23:69.20:0,69,931	0/0:21,0:21:60.19:0,60,823	0/0:34,0:34:99:0,102,1408	0/0:28,0:28:75.25:0,75,1047	0/0:19,0:19:51.17:0,51,713	0/0:20,0:20:57.19:0,57,792	1/1:0,29:29:81.25:972,81,0	0/0:9,0:9:27.09:0,27,371	0/0:19,0:19:54.15:0,54,707	0/0:25,0:25:72.23:0,72,991	0/0:9,0:9:24.08:0,24,336	0/0:16,0:16:42.14:0,42,587	0/0:20,0:20:60.20:0,60,838	0/0:20,0:20:60.20:0,60,840	0/0:16,0:16:48.15:0,48,656	0/0:14,0:14:42.14:0,42,588	0/0:26,0:26:72.23:0,72,991	0/0:9,0:9:27.09:0,27,378
chr10	42175903	.	TCACACA	T	1349.19	PASS	AC=14;AF=0.280;AN=50;BaseQRankSum=-0.945;DP=514;FS=0.000;HRun=0;HaplotypeScore=129.5389;InbreedingCoeff=0.6951;MQ=72.11;MQ0=15;MQRankSum=0.516;QD=10.14;ReadPosRankSum=0.797;VQSLOD=2.4732;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:18:3.01:0,3,50	0/0:9,0:9:12.04:0,12,328	0/0:45,0:30:33.68:0,34,733	0/0:32,0:23:46.66:0,47,1053	0/0:21,0:20:30.05:0,30,635	./.	1/1:26,3:30:42.11:768,42,0	0/0:35,0:30:63.21:0,63,1303	0/0:5,0:11:0:0,0,0	0/0:19,0:18:42.13:0,42,865	0/0:13,0:12:6.02:0,6,96	1/1:5,12:17:3.01:52,3,0	1/1:24,0:24:9.03:138,9,0	0/0:20,0:20:0:0,0,0	0/0:11,0:25:2.99:0,3,24	0/0:20,0:20:39.13:0,39,961	1/1:17,0:14:26.18:207,26,0	0/0:3,0:3:3.01:0,3,58	0/0:9,0:9:18.06:0,18,358	0/0:25,0:25:19.33:0,19,239	./.	1/1:5,11:16:2.89:50,3,0	1/1:15,0:15:3.01:34,3,0	1/1:14,0:13:12.04:257,12,0	0/0:5,0:8:6.01:0,6,76	0/0:10,0:18:51.09:0,51,828	0/0:12,0:12:24.08:0,24,501	./.
chr10	42175916	.	CACACACAGAG	C	1512.60	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=-0.748;DP=515;FS=8.237;HRun=0;HaplotypeScore=147.7237;InbreedingCoeff=0.5614;MQ=50.60;MQ0=28;MQRankSum=0.369;QD=7.96;ReadPosRankSum=0.559;VQSLOD=2.1413;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:17:3.48:0,3,51	0/0:5,0:5:11.97:0,12,341	0/0:29,0:14:33.68:0,34,733	0/0:25,0:16:47.77:0,48,1064	0/0:18,0:17:30.05:0,30,652	0/1:26,0:26:7.70:8,0,40	1/1:27,2:27:42.13:834,42,0	0/0:35,0:30:72.11:0,72,1384	0/1:13,0:11:0.04:0,0,1	0/0:18,0:17:45.12:0,45,925	0/0:13,0:12:6.02:0,6,96	1/1:20,0:20:3.25:64,3,0	1/1:5,21:27:18.01:256,18,0	0/0:6,16:21:0:0,0,0	0/0:23,0:20:2.99:0,3,25	0/0:18,0:18:39.13:0,39,1003	1/1:17,0:14:6.06:163,6,0	0/1:4,0:3:10.78:11,0,52	0/0:9,0:9:18.06:0,18,358	0/0:25,0:25:19.31:0,19,240	0/0:11,0:8:0:0,0,0	1/1:22,0:22:2.48:49,2,0	1/1:2,0:17:3.01:34,3,0	1/1:15,0:9:12.04:257,12,0	0/0:13,0:11:6.01:0,6,76	0/0:22,0:22:47.13:0,47,832	0/0:14,0:14:29.62:0,30,594	0/0:7,0:3:1.25:0,1,3
chr10	42175971	.	AGG	A	4749.31	PASS	AB=1.000;AC=51;AF=0.944;AN=54;BaseQRankSum=-2.015;DP=630;FS=9.664;HRun=3;HaplotypeScore=142.7135;InbreedingCoeff=0.0907;MQ=41.32;MQ0=56;MQRankSum=3.796;QD=7.79;ReadPosRankSum=5.929;VQSLOD=0.7613;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:25:17.32:182,17,0	0/1:6,0:6:11.93:12,0,50	1/1:5,0:1:0.47:1,0,0	0/1:32,0:5:8.19:8,0,14	1/1:10,18:28:2.94:18,3,0	1/1:32,2:31:24.43:219,24,0	1/1:32,0:29:2.84:14,3,0	1/1:17,12:27:53.03:436,53,0	1/1:18,0:16:5.29:119,5,0	1/1:17,0:17:19.90:294,20,0	./.	1/1:20,0:18:20.70:157,21,0	1/1:31,3:32:47.22:359,47,0	1/1:31,2:28:20.03:156,20,0	1/1:30,0:26:18.64:238,19,0	1/1:19,0:19:35.01:256,35,0	1/1:24,0:20:28.56:212,29,0	1/1:6,0:5:11.98:107,12,0	0/1:21,0:18:9.62:220,0,10	1/1:12,15:26:28.40:213,28,0	1/1:14,0:12:8.46:93,8,0	1/1:35,1:36:19.14:145,19,0	1/1:17,1:18:4.03:49,4,0	1/1:25,0:18:19.80:155,20,0	1/1:22,0:22:11.46:223,11,0	1/1:18,0:17:38.13:328,38,0	1/1:23,0:22:47.27:370,47,0	1/1:11,0:7:20.94:168,21,0
chr10	42175973	.	GGA	G	62.74	PASS	AB=0.967;AC=14;AF=0.280;AN=50;BaseQRankSum=0.676;DP=622;FS=4.066;HRun=0;HaplotypeScore=157.5758;InbreedingCoeff=0.3082;MQ=41.66;MQ0=57;MQRankSum=-2.937;QD=0.29;ReadPosRankSum=2.252;VQSLOD=2.2390;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:25:3.24:0,3,22	0/0:6,0:6:6.02:0,6,95	0/0:5,0:1:0:0,0,0	0/0:36,1:7:10.75:0,11,91	./.	0/1:29,3:29:15.80:18,0,16	./.	0/1:24,0:22:0.10:0,0,0	0/0:18,0:16:2.43:0,2,8	0/0:17,0:17:7.94:0,8,45	0/0:18,0:16:2.99:0,3,24	0/1:19,1:18:0.07:0,0,0	1/1:35,0:33:7.92:99,8,0	1/1:31,1:27:1.96:5,2,0	0/0:31,0:27:5.51:0,6,44	0/1:18,0:18:1.79:12,0,2	0/0:25,0:21:3.34:0,3,24	1/1:6,0:5:2.72:17,3,0	0/0:21,0:18:5.91:0,6,30	1/1:25,0:24:0.32:1,0,0	0/0:15,0:13:9.84:0,10,70	0/0:31,4:35:0.44:0,0,2	0/0:16,3:19:0.12:0,0,19	0/0:24,0:17:2.97:0,3,20	0/0:22,0:22:0.62:0,1,2	0/0:17,0:16:5.26:0,5,21	1/1:21,1:21:3.22:24,3,0	./.
chr10	42175986	.	G	GACAGACAGAC	8698.71	PASS	AB=1.000;AC=31;AF=0.574;AN=54;BaseQRankSum=-5.986;DP=679;FS=13.231;HRun=0;HaplotypeScore=202.4631;InbreedingCoeff=0.3224;MQ=50.44;MQ0=53;MQRankSum=-1.809;QD=18.24;ReadPosRankSum=-0.904;VQSLOD=3.0383;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:31:40.74:0,41,780	0/0:7,0:7:16.28:0,16,351	0/0:27,0:16:35.35:0,35,660	0/0:50,0:12:20.65:0,21,406	1/1:25,0:25:9.03:173,9,0	1/1:31,0:29:35.54:1099,36,0	./.	0/1:33,0:31:62.40:62,0,135	1/1:23,0:21:42.03:666,42,0	0/1:22,0:22:66.22:66,0,192	0/1:15,0:15:16.92:17,0,17	1/1:22,0:20:36.04:871,36,0	1/1:34,0:33:45.12:1199,45,0	1/1:28,0:25:32.71:864,33,0	0/1:31,0:29:8.58:9,0,223	1/1:20,0:20:38.79:825,39,0	1/1:21,0:19:26.88:544,27,0	0/1:7,0:6:26.51:27,0,43	0/0:17,0:14:28.31:0,28,256	0/1:25,0:24:51.37:51,0,179	0/0:15,0:13:16.84:0,17,132	1/1:28,0:29:23.79:686,24,0	1/1:23,0:23:23.82:488,24,0	1/1:24,0:20:30.10:990,30,0	0/1:21,0:21:14.92:15,0,163	0/0:15,0:14:29.64:0,30,265	0/1:26,0:25:29.20:29,0,283	0/1:15,0:11:18.65:19,0,118
chr10	42178301	.	CACTAGAA	C	8864.11	PASS	AB=0.761;AC=12;AF=0.222;AN=54;BaseQRankSum=15.839;DP=741;FS=0.745;HRun=0;HaplotypeScore=176.3778;InbreedingCoeff=0.8228;MQ=75.89;MQ0=1;MQRankSum=-14.972;QD=48.17;ReadPosRankSum=-1.598;VQSLOD=4.5386;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:96.29:0,96,3516	0/0:9,0:9:21.07:0,21,736	0/1:20,0:20:0.53:1,0,351	0/0:14,0:14:23.87:0,24,679	0/0:24,0:24:63.22:0,63,2412	0/0:32,0:32:90.31:0,90,3404	0/0:22,0:22:66.21:0,66,2331	1/1:10,18:28:54.17:1258,54,0	0/0:18,0:18:48.15:0,48,1765	0/0:26,0:26:75.26:0,75,2866	0/0:28,0:28:75.26:0,75,2855	0/0:32,0:32:84.27:0,84,3157	0/0:34,0:34:90.31:0,90,3426	0/0:34,0:34:96.33:0,96,3650	0/0:41,0:41:99:0,114,4393	0/0:36,0:36:99:0,99,3768	0/0:21,0:21:60.21:0,60,2319	0/0:16,0:16:42.14:0,42,1595	1/1:7,15:22:45.10:959,45,0	1/1:3,41:44:99:2698,111,0	1/1:6,4:9:12:242,12,0	0/0:35,0:35:93.32:0,93,3501	0/0:41,0:41:99:0,117,4260	0/0:23,0:23:56.96:0,57,2128	0/0:35,0:35:93.32:0,93,3597	0/1:2,21:23:52.84:1415,0,53	1/1:5,32:37:93.32:2292,93,0	./.
chr10	42180143	.	CATATATATAT	C	4513.74	PASS	AB=0.780;AC=23;AF=0.821;AN=28;BaseQRankSum=1.931;DP=210;FS=0.000;HRun=0;HaplotypeScore=80.6146;InbreedingCoeff=0.3726;MQ=57.45;MQ0=1;MQRankSum=-2.036;QD=29.50;ReadPosRankSum=0.772;VQSLOD=4.0933;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,2:5:3.01:90,3,0	./.	./.	./.	./.	./.	0/0:3,0:3:3.01:0,3,43	0/1:23,9:32:8.39:352,0,8	./.	1/1:2,7:9:18.06:521,18,0	1/1:6,7:13:15.05:442,15,0	./.	./.	./.	1/1:3,3:6:6.02:174,6,0	./.	0/0:7,0:7:3.01:0,3,133	1/1:6,4:10:6.02:181,6,0	1/1:11,2:13:6.02:181,6,0	1/1:4,4:8:12.04:361,12,0	./.	./.	./.	./.	1/1:6,14:20:33.11:994,33,0	1/1:8,4:12:9.03:245,9,0	1/1:4,6:10:15.05:452,15,0	1/1:8,6:15:18.06:522,18,0
chr10	42181641	.	AAT	A	570.95	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=5.897;DP=335;FS=0.975;HRun=0;HaplotypeScore=38.8740;InbreedingCoeff=0.8444;MQ=71.51;MQ0=1;MQRankSum=0.931;QD=23.79;ReadPosRankSum=1.628;VQSLOD=3.9121;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:36.12:0,36,674	0/0:4,0:4:12.01:0,12,176	0/0:6,0:4:12.02:0,12,142	0/0:10,0:7:4.68:0,5,63	1/1:0,8:8:18.06:272,18,0	0/0:17,0:17:51.17:0,51,937	0/0:5,0:5:15.05:0,15,286	0/0:35,0:35:99:0,102,1895	1/1:1,8:9:6.36:279,6,0	0/0:15,0:15:45.15:0,45,844	0/0:10,0:10:30.09:0,30,529	0/0:13,0:13:39.12:0,39,669	0/0:13,0:13:39.13:0,39,752	0/0:8,0:8:24.08:0,24,475	0/0:8,0:8:21.07:0,21,378	1/1:0,7:7:9.03:147,9,0	0/0:24,0:23:72.25:0,72,1397	0/0:14,0:14:42.14:0,42,795	0/0:25,0:25:72.23:0,72,1283	0/0:8,0:8:24.08:0,24,449	0/0:5,0:5:15.05:0,15,256	0/0:5,0:5:15.04:0,15,212	0/0:11,0:11:33.11:0,33,594	0/0:4,0:4:12.04:0,12,214	0/0:17,0:16:51.17:0,51,947	0/0:13,0:13:39.12:0,39,740	0/0:22,0:22:66.23:0,66,1301	0/0:7,0:7:21.07:0,21,341
chr10	42182531	.	G	GA	2586.10	PASS	AB=0.917;AC=7;AF=0.125;AN=56;BaseQRankSum=-10.930;DP=690;FS=1.918;HRun=9;HaplotypeScore=69.8905;InbreedingCoeff=0.8251;MQ=74.81;MQ0=0;MQRankSum=0.309;QD=22.89;ReadPosRankSum=0.459;VQSLOD=4.4991;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:86.93:0,87,746	0/0:11,0:12:32.03:0,32,266	0/0:18,0:18:23.91:0,24,203	0/0:13,0:13:1.78:0,2,167	1/1:4,38:43:85.04:1136,85,0	0/0:25,0:26:68.02:0,68,579	0/0:15,0:15:35.97:0,36,309	0/0:27,0:27:58.99:0,59,501	1/1:4,25:29:78.21:860,78,0	0/0:27,0:27:77.97:0,78,673	0/0:20,0:20:56.99:0,57,495	0/0:30,0:30:86.97:0,87,755	0/0:23,0:23:56.97:0,57,493	0/0:24,0:24:71.99:0,72,625	0/0:37,0:37:98.92:0,99,847	1/1:6,24:29:66.18:730,66,0	0/0:19,0:19:44.98:0,45,391	0/0:13,0:13:29.98:0,30,260	0/0:33,0:33:74.94:0,75,646	0/0:26,0:26:71.97:0,72,621	0/1:10,1:11:3.21:3,0,200	0/0:25,0:26:65:0,65,552	0/0:34,0:34:92.96:0,93,803	0/0:19,0:19:56.99:0,57,495	0/0:19,0:19:44.99:0,45,391	0/0:36,0:36:98.97:0,99,860	0/0:30,0:30:86.97:0,87,751	0/0:16,0:15:41.98:0,42,365
chr10	42185311	.	TAA	T	2319.32	PASS	AB=0.561;AC=18;AF=0.321;AN=56;BaseQRankSum=-2.018;DP=424;FS=2.956;HRun=13;HaplotypeScore=57.7584;InbreedingCoeff=0.8091;MQ=58.08;MQ0=25;MQRankSum=0.339;QD=14.14;ReadPosRankSum=0.742;VQSLOD=2.2804;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,14:22:56.53:510,57,0	0/0:7,0:7:17.98:0,18,210	0/0:23,0:9:16.86:0,17,200	0/0:15,0:4:5.96:0,6,46	0/0:5,0:17:38.18:0,38,197	0/0:11,0:12:32.57:0,33,398	0/0:15,0:15:36.02:0,36,456	1/1:6,9:12:27.02:256,27,0	0/1:2,1:11:29.38:29,0,49	0/0:6,1:21:11.85:0,12,135	0/1:5,2:20:16.32:16,0,90	0/0:14,0:15:29.48:0,29,313	0/0:13,0:12:27.09:0,27,391	0/0:12,0:10:24.03:0,24,297	0/0:7,0:15:17.94:0,18,71	0/0:3,0:13:24.95:0,25,86	0/0:12,0:13:32.06:0,32,372	0/0:1,0:9:20.43:0,20,79	1/1:4,6:8:18.01:174,18,0	1/1:5,12:18:26.97:311,27,0	1/1:4,11:14:24.02:233,24,0	0/0:9,0:9:20.56:0,21,265	0/0:17,0:18:44.55:0,45,550	0/0:14,0:14:39.08:0,39,466	0/0:7,0:13:25.43:0,25,98	1/1:6,10:16:23.72:237,24,0	1/1:4,17:21:47.79:448,48,0	1/1:3,11:13:33.02:313,33,0
chr10	42185444	.	TC	T	2083.14	PASS	AB=1.000;AC=25;AF=0.446;AN=56;BaseQRankSum=0.679;DP=363;FS=13.455;HRun=10;HaplotypeScore=52.0814;InbreedingCoeff=0.6878;MQ=75.05;MQ0=0;MQRankSum=-0.283;QD=9.18;ReadPosRankSum=4.795;VQSLOD=0.5850;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:14:29.25:0,29,198	0/0:4,0:4:9.01:0,9,91	0/1:21,0:19:10.44:10,0,173	0/1:16,0:15:31.34:31,0,101	1/1:3,3:6:11.85:93,12,0	1/1:8,9:17:23.95:208,24,0	1/1:8,9:17:17.91:151,18,0	0/0:6,0:11:11.51:0,12,65	1/1:6,11:17:26.94:233,27,0	0/0:10,0:10:24.04:0,24,243	0/0:4,0:4:12:0,12,109	1/1:11,11:22:23.90:208,24,0	1/1:7,10:17:20.95:182,21,0	1/1:7,5:12:8.93:78,9,0	0/0:18,0:18:44.99:0,45,422	1/1:6,13:19:29.94:260,30,0	0/0:14,0:14:33.01:0,33,309	0/0:12,0:12:27.05:0,27,284	0/0:8,0:9:11.82:0,12,93	0/0:4,0:7:3.44:0,3,20	0/0:8,0:13:5.85:0,6,47	1/1:4,6:10:14.98:130,15,0	1/1:6,9:15:26.95:228,27,0	1/1:17,17:34:53.86:467,54,0	0/1:4,0:4:12.19:12,0,56	0/0:3,0:3:5.96:0,6,46	0/0:13,0:13:26.66:0,27,215	0/0:4,0:4:5.58:0,6,33
chr10	42188730	.	CAAAAAA	C	13776.09	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=2.742;DP=644;FS=2.063;HRun=15;HaplotypeScore=167.7356;InbreedingCoeff=0.9874;MQ=73.56;MQ0=2;MQRankSum=-15.444;QD=34.44;ReadPosRankSum=8.084;VQSLOD=1.6170;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,11:18:26.88:501,27,0	0/0:8,0:8:24.08:0,24,685	0/0:28,0:22:36.59:0,37,837	0/0:22,0:21:44.98:0,45,682	1/1:7,0:38:63.19:745,63,0	0/0:13,0:24:54.18:0,54,1117	0/0:9,0:23:45.15:0,45,984	1/1:8,15:23:44.90:809,45,0	1/1:4,0:18:33.02:391,33,0	1/1:6,32:38:93.18:1695,93,0	1/1:3,21:24:47.94:890,48,0	0/0:12,0:24:45.15:0,45,1048	0/0:15,0:24:66.15:0,66,1352	0/0:8,0:22:39.13:0,39,810	1/1:8,24:32:69.06:1280,69,0	1/1:5,0:35:75.14:889,75,0	0/0:2,0:9:15.05:0,15,290	1/1:2,4:6:8.98:167,9,0	1/1:2,8:10:23.97:413,24,0	1/1:5,30:35:84.10:1522,84,0	1/1:7,7:14:17.86:313,18,0	0/0:10,0:21:54.17:0,54,1071	0/0:14,0:25:60.18:0,60,1279	0/0:5,0:13:30.10:0,30,618	1/1:1,30:31:69.21:1280,69,0	1/1:4,23:27:69.14:1252,69,0	1/1:9,31:41:30.27:1249,30,0	1/1:1,6:10:26.66:379,27,0
chr10	42189181	.	GCT	G	518.67	PASS	AB=0.974;AC=26;AF=0.565;AN=46;BaseQRankSum=3.777;DP=557;FS=5.642;HRun=0;HaplotypeScore=130.4955;InbreedingCoeff=0.3056;MQ=64.94;MQ0=22;MQRankSum=-1.259;QD=1.53;ReadPosRankSum=1.259;VQSLOD=2.2917;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:22:8.87:59,9,0	0/0:10,0:9:14.89:0,15,159	./.	./.	0/0:29,0:29:29.98:0,30,265	0/0:18,0:19:15.61:0,16,162	0/1:28,0:28:7.31:7,0,101	./.	0/0:23,0:21:15:0,15,146	1/1:23,0:24:14.20:70,14,0	./.	0/1:28,0:26:8.50:8,0,248	0/1:21,0:19:16.02:33,0,16	0/1:18,0:18:6.33:6,0,146	0/1:31,0:30:0:0,0,0	0/0:23,0:22:18:0,18,159	1/1:12,4:15:2.84:14,3,0	./.	1/1:12,0:14:5.68:28,6,0	1/1:16,2:21:14.85:112,15,0	1/1:14,0:15:2.84:14,3,0	0/1:14,0:14:15.06:15,0,42	0/0:13,0:12:0.70:0,1,81	0/1:15,0:15:6.44:6,0,139	0/1:9,0:10:0:0,0,0	1/1:15,2:19:23.61:188,24,0	1/1:13,1:16:14.68:94,15,0	1/1:19,0:19:2.84:14,3,0
chr10	42189209	.	TCTCTCTCTCTCTCTCACACA	T	886.15	PASS	AB=0.971;AC=9;AF=0.167;AN=54;BaseQRankSum=4.913;DP=577;FS=1.769;HRun=0;HaplotypeScore=232.5114;InbreedingCoeff=0.2639;MQ=38.48;MQ0=89;MQRankSum=-3.032;QD=6.33;ReadPosRankSum=-2.644;VQSLOD=2.3522;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:24:30.05:0,30,570	0/0:13,0:9:18.53:0,19,1321	./.	0/0:10,0:1:3.01:0,3,41	0/0:31,0:29:34.29:0,34,2220	0/0:23,0:22:30.10:0,30,1885	0/0:21,0:18:28.04:0,28,1542	0/0:27,0:24:66.15:0,66,1209	0/0:25,0:22:15.50:0,15,1363	0/1:18,0:18:3.10:825,0,3	0/1:24,1:21:16.81:17,0,48	0/0:31,0:28:37.01:0,37,2370	0/1:26,0:16:20.30:20,0,845	0/0:19,0:18:33.11:0,33,2020	0/1:29,4:27:51.19:51,0,108	0/0:24,0:21:29.72:0,30,1670	0/0:20,0:13:17.08:0,17,540	1/1:5,0:2:2.68:11,3,0	0/0:14,0:13:27.05:0,27,461	0/0:25,0:21:28.90:0,29,914	0/0:18,0:11:9.87:0,10,150	0/0:15,0:12:15.04:0,15,659	0/0:20,0:17:17.90:0,18,1077	0/0:21,0:17:26.86:0,27,1489	1/1:13,1:13:6.23:86,6,0	0/1:19,0:17:6.98:7,0,1568	0/0:20,0:17:35.22:0,35,854	0/0:25,0:15:39.08:0,39,751
chr10	42189211	.	TCTCTCTCTCTCTCACACA	T	1210.05	PASS	AB=0.960;AC=11;AF=0.212;AN=52;BaseQRankSum=4.962;DP=565;FS=2.498;HRun=0;HaplotypeScore=224.4745;InbreedingCoeff=0.3271;MQ=37.98;MQ0=90;MQRankSum=-2.465;QD=7.52;ReadPosRankSum=-2.531;VQSLOD=2.1419;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:22:24.70:0,25,401	0/0:13,0:9:18.12:0,18,1171	./.	./.	0/0:30,0:28:33.98:0,34,1935	0/0:22,0:21:30.10:0,30,1638	0/0:21,0:18:28.04:0,28,1312	0/0:27,0:23:57.15:0,57,930	0/0:25,0:22:15.48:0,15,1183	1/1:5,13:18:42.94:1047,43,0	0/1:24,2:21:19.17:39,0,19	0/0:31,0:28:36.95:0,37,2055	0/1:26,0:16:25.86:26,0,640	0/0:18,0:17:33.10:0,33,1745	0/1:29,5:28:62.79:63,0,90	0/0:24,0:21:29.52:0,30,1462	0/0:20,0:13:17.08:0,17,447	1/1:5,0:2:2.68:11,3,0	0/0:14,0:13:18.91:0,19,242	0/0:25,0:21:25.76:0,26,688	0/1:18,0:11:14.89:15,0,76	0/0:14,0:11:12.04:0,12,531	0/0:20,0:17:17.98:0,18,895	0/0:20,0:17:23.99:0,24,1281	1/1:13,2:14:6.23:112,6,0	0/1:19,0:17:45.83:46,0,1251	0/0:18,0:15:35.15:0,35,611	0/0:24,0:14:29.52:0,30,572
chr10	42189223	.	TCACACA	T	390.91	PASS	AC=8;AF=0.160;AN=50;BaseQRankSum=4.261;DP=542;FS=3.613;HRun=0;HaplotypeScore=173.8537;InbreedingCoeff=0.6724;MQ=35.94;MQ0=92;MQRankSum=-3.326;QD=6.74;ReadPosRankSum=-0.779;VQSLOD=2.7272;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:20:8.87:0,9,109	0/0:14,0:10:21.06:0,21,314	./.	./.	0/0:30,0:29:12.47:0,12,269	0/0:20,0:18:15.02:0,15,223	0/0:19,0:17:9.95:0,10,138	0/0:26,0:21:42.14:0,42,772	0/0:28,0:24:15.03:0,15,292	1/1:17,0:17:30.97:434,31,0	0/0:21,4:20:0.70:0,1,2	0/0:32,0:29:10.39:0,10,204	1/1:21,0:12:10.73:61,11,0	0/0:16,0:15:20.27:0,20,361	0/0:29,2:25:0.98:0,1,3	0/0:25,0:22:21.66:0,22,350	0/0:20,0:11:9.90:0,10,117	1/1:6,0:2:2.68:11,3,0	0/0:13,0:12:17.78:0,18,207	0/0:24,0:19:14.52:0,15,138	./.	0/0:15,0:12:3.01:0,3,45	0/0:21,0:18:5.97:0,6,45	0/0:19,0:16:12.29:0,12,254	1/1:13,1:13:2.74:12,3,0	0/0:23,0:21:50.56:0,51,625	0/0:18,0:15:17.35:0,17,113	0/0:23,0:11:26.02:0,26,479
chr10	42189240	.	CACACACAGAGAGAGAG	C	1613.06	PASS	AB=1.000;AC=17;AF=0.327;AN=52;BaseQRankSum=3.188;DP=544;FS=11.048;HRun=0;HaplotypeScore=214.4784;InbreedingCoeff=0.1892;MQ=34.85;MQ0=91;MQRankSum=-5.941;QD=6.50;ReadPosRankSum=0.412;VQSLOD=1.3661;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:20:8.93:0,9,303	0/0:17,0:13:22.30:0,22,522	./.	./.	0/0:27,0:26:12.69:0,13,271	0/1:19,0:17:14.81:15,0,231	0/0:16,0:14:9.95:0,10,139	0/0:29,0:24:10.15:0,10,876	0/1:26,0:22:99:119,0,265	1/1:17,0:17:42.14:839,42,0	0/0:24,0:21:2.04:0,2,5	0/1:24,0:21:46.30:46,0,190	1/1:21,0:13:15.05:395,15,0	0/1:18,0:17:22.97:23,0,340	1/1:29,3:28:0.39:31,0,0	0/1:24,0:21:99:169,0,310	0/0:22,0:13:15.51:0,16,470	1/1:5,0:1:2.68:11,3,0	0/0:11,0:11:27.58:0,28,512	0/0:27,0:22:12.02:0,12,129	0/0:16,0:8:5.61:0,6,72	0/0:15,0:12:3.01:0,3,45	0/0:21,0:18:5.47:0,5,44	0/0:18,0:14:9.81:0,10,249	1/1:16,1:16:6.49:100,6,0	0/1:22,0:20:17.06:17,0,1032	0/1:21,0:18:7.81:8,0,337	0/0:23,0:11:26.02:0,26,772
chr10	42189244	.	CACAGAGAGAGAG	C	1507.27	PASS	AB=1.000;AC=19;AF=0.380;AN=50;BaseQRankSum=2.883;DP=523;FS=5.763;HRun=0;HaplotypeScore=187.8515;InbreedingCoeff=0.1619;MQ=34.30;MQ0=90;MQRankSum=-3.142;QD=5.73;ReadPosRankSum=1.518;VQSLOD=2.3900;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:21:8.62:0,9,198	0/0:16,0:12:16.25:0,16,232	./.	./.	0/0:27,0:26:12.48:0,12,79	0/1:18,0:16:14:51,0,14	0/0:14,0:12:6.85:0,7,40	0/0:29,0:24:15.10:0,15,397	0/1:24,0:20:54.97:118,0,55	1/1:16,0:16:39.71:444,40,0	0/0:25,0:20:1.75:0,2,4	0/1:23,0:20:46.33:82,0,46	1/1:11,10:13:15.05:501,15,0	0/1:17,0:16:65.20:65,0,85	1/1:32,0:27:0.58:32,1,0	0/1:24,0:21:99:178,0,102	0/0:20,0:11:14.43:0,14,317	1/1:5,0:1:2.94:18,3,0	0/0:12,0:11:6.51:0,7,210	1/1:25,0:20:2.22:7,2,0	0/0:15,0:8:5.21:0,5,23	./.	0/0:19,0:17:2.37:0,2,10	0/0:16,0:13:6.43:0,6,60	1/1:16,0:14:6.49:75,6,0	0/1:20,0:19:54.57:55,0,489	0/1:21,0:18:36.73:37,0,119	0/0:24,0:11:28.78:0,29,438
chr10	42189246	.	CAGAGAGAGAGAG	C	1255.85	PASS	AB=0.923;AC=21;AF=0.457;AN=46;BaseQRankSum=0.345;DP=527;FS=10.272;HRun=0;HaplotypeScore=190.7409;InbreedingCoeff=0.2985;MQ=34.89;MQ0=89;MQRankSum=-1.761;QD=4.69;ReadPosRankSum=0.400;VQSLOD=2.0140;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:23:6.02:0,6,193	0/0:9,0:11:10.28:0,10,190	./.	./.	0/0:27,0:26:0.88:0,1,2	1/1:9,9:16:5.75:63,6,0	0/0:6,8:12:0.94:0,1,2	0/0:29,0:24:2.10:0,2,254	1/1:24,0:20:6.02:145,6,0	0/1:17,0:17:24.18:202,0,24	0/0:25,0:20:1.75:0,2,4	1/1:13,9:19:2.54:103,3,0	1/1:19,1:12:15.05:445,15,0	1/1:8,9:16:3.01:101,3,0	1/1:31,0:27:0.53:15,1,0	0/1:23,0:20:25.87:244,0,26	0/0:21,0:12:9.03:0,9,298	./.	0/0:11,0:12:15.52:0,16,223	./.	0/0:15,0:8:5.38:0,5,45	./.	0/1:12,8:18:0.03:0,0,0	1/1:14,1:13:3.44:16,3,0	1/1:16,0:14:6.39:40,6,0	0/1:22,0:20:18.81:19,0,534	0/1:19,0:18:1.02:1,0,177	0/0:23,0:11:12.04:0,12,343
chr10	42189274	.	GAGAGAGAGAGAGACAA	G	1367.76	PASS	AB=0.987;AC=16;AF=0.286;AN=56;BaseQRankSum=4.570;DP=541;FS=12.484;HRun=0;HaplotypeScore=199.9044;InbreedingCoeff=0.1959;MQ=42.43;MQ0=68;MQRankSum=-3.052;QD=5.01;ReadPosRankSum=-5.119;VQSLOD=0.2842;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:24:6.01:0,6,255	0/0:10,0:9:15.44:0,15,302	0/0:15,0:7:19.73:0,20,273	0/1:24,0:7:2.66:3,0,89	1/1:23,2:24:22.46:134,22,0	0/0:14,0:13:23.97:0,24,328	0/0:23,0:22:42.02:0,42,696	0/0:30,0:29:51.96:0,52,958	1/1:17,0:15:17.71:278,18,0	0/1:14,0:14:9.54:10,0,149	1/1:26,0:22:36.21:204,36,0	0/0:18,0:16:5.85:0,6,260	0/1:26,0:20:18.78:19,0,317	0/0:18,0:16:3.63:0,4,262	0/1:29,0:28:66.45:154,0,66	0/1:17,3:17:1.06:446,0,1	0/0:21,0:12:23.97:0,24,546	0/0:3,0:3:3.01:0,3,107	0/1:15,0:14:8.15:8,0,227	0/1:25,0:21:6.41:178,0,6	0/1:11,0:7:2.83:3,0,63	0/0:16,0:14:29.81:0,30,298	0/0:18,0:15:23.15:0,23,307	0/0:14,0:10:8.08:0,8,153	0/1:19,0:18:90.97:91,0,98	0/0:16,0:15:37.55:0,38,1096	0/1:22,0:20:3.67:4,0,428	0/0:22,0:9:26.68:0,27,715
chr10	42189276	.	GAGAGAGAGAGACAA	G	1616.86	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=5.707;DP=538;FS=9.536;HRun=0;HaplotypeScore=187.7563;InbreedingCoeff=0.2369;MQ=43.32;MQ0=59;MQRankSum=-3.994;QD=6.22;ReadPosRankSum=-4.609;VQSLOD=-0.3537;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:25:6.02:0,6,204	0/0:9,0:8:14.97:0,15,274	0/0:18,0:8:22.70:0,23,271	0/0:28,0:9:2.86:0,3,117	1/1:9,16:24:22.68:135,23,0	0/0:14,0:13:22.75:0,23,277	0/0:22,0:22:42.02:0,42,673	0/0:30,0:29:50.20:0,50,707	1/1:6,11:15:17.71:313,18,0	0/1:15,0:15:54.71:87,0,55	1/1:24,0:21:36.62:205,37,0	0/1:17,0:16:7.21:7,0,209	0/1:27,0:21:99:104,0,340	0/1:17,0:15:9.68:10,0,259	0/1:26,0:26:13.99:156,0,14	1/1:17,2:16:14.14:487,14,0	0/0:21,0:12:23.97:0,24,512	0/0:4,0:4:2.02:0,2,83	0/0:15,0:14:6.47:0,6,194	0/1:23,0:20:4.65:178,0,5	0/1:10,0:7:3.36:3,0,38	0/0:16,0:14:29.81:0,30,298	0/0:18,0:16:26.34:0,26,326	0/0:14,0:10:8.10:0,8,135	0/1:18,0:18:34.27:100,0,34	0/0:17,0:16:20.41:0,20,787	0/1:22,0:20:4.61:5,0,291	0/0:21,0:9:26.88:0,27,581
chr10	42189282	.	GAGAGACAA	G	1938.11	PASS	AB=0.992;AC=24;AF=0.429;AN=56;BaseQRankSum=8.178;DP=520;FS=7.755;HRun=0;HaplotypeScore=161.0064;InbreedingCoeff=0.4207;MQ=48.21;MQ0=46;MQRankSum=-3.638;QD=6.59;ReadPosRankSum=-0.838;VQSLOD=2.0855;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:24:5.01:0,5,55	0/0:8,0:7:14.63:0,15,154	0/0:21,0:11:28.53:0,29,323	0/0:31,0:12:8.40:0,8,205	1/1:23,0:22:23.55:136,24,0	0/0:16,0:15:26.94:0,27,354	0/0:23,0:23:45.03:0,45,681	0/1:27,0:26:28.44:28,0,211	1/1:16,0:14:17.71:192,18,0	1/1:12,1:13:1.03:237,1,0	1/1:21,2:20:37.36:207,37,0	0/0:15,0:14:3.95:0,4,207	0/1:27,0:23:63.64:64,0,438	0/1:18,0:16:4.55:5,0,308	1/1:23,3:26:39.77:267,40,0	1/1:19,0:16:7.54:250,8,0	0/0:20,0:12:26.98:0,27,403	0/0:4,0:4:2.01:0,2,26	0/1:13,0:12:52.69:53,0,64	0/1:19,0:17:0.39:193,0,0	1/1:8,0:6:5.67:36,6,0	0/0:16,0:15:32.82:0,33,350	0/0:16,0:15:26.29:0,26,304	0/0:10,0:8:8.97:0,9,140	1/1:15,3:18:17.11:131,17,0	0/1:18,1:18:96:169,0,96	1/1:25,0:23:0.89:157,1,0	0/0:18,0:9:5.41:0,5,130
chr10	42189284	.	GAGACAA	G	1880.13	PASS	AB=0.971;AC=21;AF=0.375;AN=56;BaseQRankSum=8.395;DP=513;FS=6.560;HRun=0;HaplotypeScore=153.3665;InbreedingCoeff=0.4297;MQ=51.57;MQ0=37;MQRankSum=-3.722;QD=7.15;ReadPosRankSum=-0.917;VQSLOD=2.0633;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:24:2.39:0,2,9	0/0:8,0:7:6.98:0,7,120	0/0:22,0:12:31.41:0,31,338	0/0:32,0:13:7.90:0,8,203	1/1:22,0:21:23.62:137,24,0	0/0:16,0:15:27:0,27,374	0/0:23,0:23:45.03:0,45,681	0/1:28,0:27:32.24:32,0,182	1/1:14,0:13:17.71:164,18,0	0/1:14,0:14:4.63:138,0,5	1/1:24,0:22:40.41:224,40,0	0/0:13,0:12:14.41:0,14,211	0/0:27,0:24:14.27:0,14,507	0/0:18,0:16:13.02:0,13,321	1/1:25,0:25:37.17:221,37,0	1/1:18,0:15:14.97:213,15,0	0/0:21,0:13:29.99:0,30,393	0/0:4,0:4:1.50:0,2,7	0/1:13,1:13:63.90:92,0,64	0/1:16,2:17:0.39:193,0,0	1/1:8,0:6:5.81:47,6,0	0/0:16,0:15:32.82:0,33,350	0/0:15,0:14:26.04:0,26,303	0/0:9,0:8:9.03:0,9,141	1/1:15,0:15:15.70:117,16,0	0/1:20,0:20:51.72:252,0,52	0/1:25,1:24:11.90:213,0,12	0/1:17,0:9:27.47:27,0,69
chr10	42189286	.	GACAA	G	2165.14	PASS	AB=0.951;AC=25;AF=0.446;AN=56;BaseQRankSum=7.536;DP=500;FS=1.634;HRun=0;HaplotypeScore=141.6222;InbreedingCoeff=0.4293;MQ=52.85;MQ0=22;MQRankSum=-4.465;QD=7.71;ReadPosRankSum=-2.076;VQSLOD=2.4810;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:24:0.39:1,0,0	0/0:8,0:7:2.44:0,2,85	0/0:22,0:12:30.96:0,31,337	0/0:32,0:13:8.16:0,8,204	1/1:22,0:21:24.04:137,24,0	0/0:16,0:15:27:0,27,374	0/0:24,0:24:48.04:0,48,733	0/1:27,0:27:32.76:33,0,179	1/1:14,0:13:17.71:136,18,0	0/1:13,0:13:10.45:89,0,10	1/1:21,0:20:40.88:225,41,0	0/0:14,0:14:26.32:0,26,320	0/0:25,0:24:45.32:0,45,583	0/0:18,0:16:23.07:0,23,337	1/1:22,0:22:33.50:197,34,0	1/1:19,0:17:22.61:179,23,0	0/0:20,0:13:29.88:0,30,339	1/1:4,0:4:3.48:12,3,0	0/1:12,1:12:63.94:99,0,64	1/1:17,0:17:0.38:193,0,0	1/1:1,6:6:5.85:71,6,0	0/0:15,0:15:32.82:0,33,350	0/0:16,0:15:29.02:0,29,353	0/0:9,0:8:9.03:0,9,141	1/1:15,0:15:15.04:114,15,0	0/1:17,3:20:31.64:498,0,32	0/1:23,3:24:11.52:252,0,12	0/1:17,0:12:25.52:121,0,26
chr10	42189290	.	A	AAG	6770.97	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=1.818;DP=496;FS=1.538;HRun=0;HaplotypeScore=120.7671;InbreedingCoeff=0.9409;MQ=57.47;MQ0=14;MQRankSum=-1.704;QD=24.27;ReadPosRankSum=-1.614;VQSLOD=5.1657;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,20:23:11.94:176,12,0	0/0:8,0:7:11.95:0,12,118	0/0:23,0:13:29.14:0,29,320	0/0:35,0:16:21.51:0,22,238	1/1:19,3:21:29.74:358,30,0	0/0:16,0:15:27:0,27,313	0/0:22,0:22:51.05:0,51,606	1/1:9,20:29:57.12:866,57,0	1/1:11,2:13:18.04:202,18,0	1/1:13,0:13:32.29:376,32,0	1/1:4,13:16:39.12:471,39,0	0/0:14,0:14:26.96:0,27,293	0/0:23,0:22:48.16:0,48,621	0/0:17,0:15:24.04:0,24,293	1/1:12,8:20:53.94:695,54,0	1/1:7,8:14:30.05:379,30,0	0/0:18,0:13:26.98:0,27,295	1/1:2,3:5:3.01:51,3,0	1/1:9,9:18:33.09:490,33,0	1/1:6,14:21:51.04:641,51,0	1/1:7,0:6:5.93:65,6,0	0/0:15,0:15:35.77:0,36,323	0/0:18,0:17:29.66:0,30,294	0/0:8,0:7:8.93:0,9,116	1/1:9,5:14:39.11:541,39,0	1/1:6,14:21:52.46:791,52,0	1/1:13,14:26:26.60:301,27,0	1/1:11,3:12:24.06:369,24,0
chr10	42189609	.	AGTGTGTGT	A	4438.27	PASS	AC=22;AF=0.440;AN=50;BaseQRankSum=5.848;DP=533;FS=0.000;HRun=0;HaplotypeScore=149.9147;InbreedingCoeff=0.8815;MQ=55.54;MQ0=10;MQRankSum=-7.514;QD=20.27;ReadPosRankSum=0.169;VQSLOD=3.9298;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:35:42.14:0,42,1291	0/0:5,0:5:6.02:0,6,246	./.	./.	1/1:14,0:29:32.98:470,33,0	1/1:7,11:18:24.08:573,24,0	1/1:24,5:29:3.60:552,4,0	0/0:36,0:36:18.06:0,18,436	1/1:15,0:25:24.08:410,24,0	0/0:16,0:16:24.95:0,25,658	0/0:18,0:20:6.01:0,6,101	1/1:11,2:13:8.70:145,9,0	1/1:10,7:17:24.08:561,24,0	1/1:10,8:19:21.07:485,21,0	0/0:18,0:18:10.75:0,11,329	1/1:3,0:13:24.08:428,24,0	0/0:13,0:26:21.96:0,22,373	0/0:15,0:14:20.24:0,20,448	0/0:14,0:13:13.86:0,14,413	0/0:17,0:22:21.06:0,21,575	0/0:12,0:15:8.99:0,9,231	1/1:11,8:20:18.06:424,18,0	1/1:8,5:14:11.93:241,12,0	1/1:12,6:18:6.02:150,6,0	0/0:21,0:19:12.98:0,13,375	0/0:16,0:14:24.08:0,24,694	0/0:13,0:20:18.53:0,19,556	./.
chr10	42190327	.	AT	A	11013.86	PASS	AB=1.000;AC=33;AF=0.589;AN=56;BaseQRankSum=18.629;DP=590;FS=3.496;HRun=1;HaplotypeScore=97.7896;InbreedingCoeff=0.8999;MQ=85.98;MQ0=0;MQRankSum=-2.490;QD=31.74;ReadPosRankSum=-0.889;VQSLOD=4.3359;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,7:11:29.88:308,30,0	0/0:16,0:16:45.10:0,45,598	0/0:21,0:22:47.73:0,48,778	0/1:16,0:16:27.48:27,0,339	1/1:0,31:31:89.97:1029,90,0	0/0:33,0:33:99:0,99,1370	0/0:22,0:22:66.15:0,66,865	1/1:0,31:31:89.98:1040,90,0	1/1:1,16:17:48.16:620,48,0	1/1:9,18:27:74.28:849,74,0	1/1:5,17:22:57.05:680,57,0	0/0:23,0:23:69.22:0,69,984	0/0:25,0:25:75.21:0,75,1035	0/0:28,0:28:84.27:0,84,1204	1/1:0,26:27:74.45:938,74,0	1/1:1,30:31:88.84:1129,89,0	0/0:15,0:15:42.09:0,42,589	1/1:0,6:7:15.05:192,15,0	1/1:1,12:13:39:434,39,0	1/1:8,12:20:55.67:573,56,0	1/1:0,13:13:39.04:467,39,0	0/0:18,0:18:54.08:0,54,703	0/0:28,0:28:84.23:0,84,1151	0/0:13,0:13:39.10:0,39,531	1/1:0,24:24:57.10:698,57,0	1/1:0,29:29:87.02:1012,87,0	1/1:2,25:27:70.85:979,71,0	1/1:0,1:1:3.01:39,3,0
chr10	42195431	.	C	CTG	9317.90	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-16.352;DP=813;FS=1.769;HRun=0;HaplotypeScore=90.0898;InbreedingCoeff=0.9680;MQ=87.75;MQ0=0;MQRankSum=-3.236;QD=45.45;ReadPosRankSum=-2.842;VQSLOD=4.7497;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,102,1380	0/0:13,0:13:39.12:0,39,512	0/0:30,0:30:63.20:0,63,833	0/0:27,0:27:54.10:0,54,672	0/0:39,0:39:99:0,105,1403	0/0:42,0:42:99:0,120,1607	0/0:17,0:17:48.16:0,48,649	1/1:4,39:43:99:1983,117,0	0/0:22,0:22:63.21:0,63,850	0/0:21,0:21:54.18:0,54,731	0/0:36,0:36:99:0,105,1403	0/0:32,0:32:81.27:0,81,1096	0/0:43,0:43:99:0,111,1502	0/0:28,0:28:78.24:0,78,1040	0/0:33,0:33:87.29:0,87,1175	0/0:32,0:32:90.30:0,90,1218	0/0:22,0:22:60.20:0,60,812	0/0:14,0:14:42.12:0,42,551	1/1:6,16:22:48.16:819,48,0	1/1:0,28:28:78.27:1367,78,0	1/1:3,25:28:69.24:1210,69,0	0/0:28,0:28:81.25:0,81,1074	0/0:26,0:26:78.26:0,78,1052	0/0:29,0:29:75.25:0,75,1012	0/0:39,0:39:99:0,114,1542	1/1:3,25:29:3.07:1258,3,0	1/1:3,32:36:99:1734,99,0	1/1:1,18:19:54.19:947,54,0
chr10	42195957	.	TAATTGGTGTTGTCCAGCTGACTCCAACAGCATCTCC	T	20264.47	PASS	AC=28;AF=0.538;AN=52;BaseQRankSum=16.949;DP=851;FS=2.062;HRun=0;HaplotypeScore=671.0446;InbreedingCoeff=0.9210;MQ=79.97;MQ0=0;MQRankSum=-7.438;QD=47.79;ReadPosRankSum=1.174;VQSLOD=-0.5001;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:15,19:34:3.01:153,3,0	0/0:20,0:20:57.20:0,57,6800	0/0:34,0:34:86.20:0,86,5186	0/0:16,0:16:48.16:0,48,3015	1/1:12,28:40:33.11:1659,33,0	0/0:30,0:30:84.29:0,84,9988	0/0:49,0:49:99:0,129,13413	./.	1/1:9,20:29:12.04:1067,12,0	1/1:9,33:42:96.05:2870,96,0	1/1:6,16:22:21.07:956,21,0	0/0:43,0:43:99:0,120,14298	0/0:41,0:41:99:0,120,12635	0/0:48,0:48:99:0,141,17307	1/1:11,28:39:12.04:1066,12,0	1/1:12,29:41:27.07:2284,27,0	0/0:27,0:27:81.23:0,81,8908	1/1:8,0:8:6.02:312,6,0	1/1:10,17:27:51.10:1177,51,0	1/1:7,27:34:30.10:1601,30,0	1/1:22,0:22:15.05:556,15,0	0/0:30,0:30:87.30:0,87,10385	0/0:34,0:34:99:0,102,12028	0/0:35,0:35:99:0,105,11622	1/1:5,15:20:3.01:229,3,0	1/1:9,28:37:71.72:2787,72,0	1/1:4,25:29:39.13:3547,39,0	./.
chr10	42197001	.	A	ACAAG	7421.35	PASS	AC=24;AF=0.444;AN=54;BaseQRankSum=13.070;DP=480;FS=2.890;HRun=0;HaplotypeScore=142.5621;InbreedingCoeff=0.9648;MQ=96.85;MQ0=0;MQRankSum=-12.936;QD=59.85;ReadPosRankSum=1.462;VQSLOD=6.7676;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,15:19:57.20:1296,57,0	0/0:11,0:11:33.11:0,33,686	0/0:29,0:29:87.30:0,87,1810	0/0:22,0:22:62.97:0,63,1101	0/0:33,0:33:99:0,99,2058	0/0:34,0:34:99:0,99,1996	0/0:18,0:18:54.19:0,54,1108	1/1:3,0:3:6.02:105,6,0	0/0:21,0:21:63.22:0,63,1308	1/1:1,9:10:27.09:635,27,0	1/1:1,5:6:18.06:398,18,0	0/0:29,0:29:87.30:0,87,1813	0/0:25,0:25:72.25:0,72,1497	0/0:27,0:27:81.28:0,81,1689	1/1:2,15:17:48.64:1092,49,0	0/0:25,0:25:72.23:0,72,1407	0/0:18,0:18:45.94:0,46,1045	1/1:1,4:5:10.81:275,11,0	1/1:1,2:3:9.01:167,9,0	1/1:3,12:15:40.02:877,40,0	1/1:6,3:9:12.04:247,12,0	0/0:23,0:23:66.23:0,66,1340	0/0:27,0:27:81.28:0,81,1697	0/0:14,0:14:42.10:0,42,838	1/1:4,6:10:30.10:639,30,0	1/1:3,11:14:42.14:988,42,0	1/1:5,8:13:30.07:702,30,0	./.
chr10	42197004	.	A	AGAACGAACAG	25152.80	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=16.754;DP=571;FS=0.667;HRun=0;HaplotypeScore=217.9156;InbreedingCoeff=0.9713;MQ=89.61;MQ0=0;MQRankSum=-17.945;QD=113.81;ReadPosRankSum=0.036;VQSLOD=4.9454;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,15:26:66.15:2817,66,0	0/0:11,0:11:33.07:0,33,987	0/0:30,0:30:90.30:0,90,2926	0/0:21,0:21:44.65:0,45,1711	0/0:34,0:34:99:0,102,3278	0/0:33,0:33:99:0,99,3295	0/0:17,0:17:48.16:0,48,1645	1/1:25,0:25:72.25:3145,72,0	0/0:20,0:20:60.19:0,60,2016	1/1:9,9:18:51.18:2315,51,0	1/1:7,5:12:33.11:1373,33,0	0/0:29,0:29:87.30:0,87,2944	0/0:24,0:24:72.25:0,72,2478	0/0:27,0:27:81.28:0,81,2744	1/1:6,15:22:66.23:3175,66,0	0/0:22,0:22:66.20:0,66,2039	0/0:17,0:17:46.64:0,47,1642	1/1:7,4:11:33.06:1190,33,0	1/1:2,2:4:12.04:583,12,0	1/1:9,12:26:53.87:2488,54,0	1/1:8,3:16:22.63:941,23,0	0/0:21,0:21:63.22:0,63,2081	0/0:27,0:27:81.26:0,81,2729	0/0:17,0:17:45.15:0,45,1417	1/1:9,6:15:42.14:1643,42,0	1/1:12,11:23:62.55:2703,63,0	1/1:12,8:21:59.98:2630,60,0	1/1:2,0:2:3.01:150,3,0
chr10	42197593	.	AAC	A	1389.32	PASS	AB=0.852;AC=29;AF=0.537;AN=54;BaseQRankSum=2.578;DP=678;FS=0.682;HRun=0;HaplotypeScore=116.5506;InbreedingCoeff=0.3004;MQ=59.97;MQ0=13;MQRankSum=2.873;QD=3.37;ReadPosRankSum=2.588;VQSLOD=2.3231;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:26,12:40:24.54:132,0,25	0/1:11,1:13:14.62:15,0,124	./.	0/0:54,0:25:0:0,0,0	1/1:10,6:17:8.81:66,9,0	0/1:21,0:26:24.85:30,0,25	1/1:19,0:27:17.04:102,17,0	0/0:29,0:28:11.90:0,12,84	0/1:15,2:17:50.53:51,0,85	1/1:19,1:21:8.48:58,8,0	1/1:15,0:14:5.83:38,6,0	1/1:14,0:19:5.53:37,6,0	1/1:16,0:34:20.83:130,21,0	1/1:9,0:15:11.12:52,11,0	1/1:14,7:21:9.68:185,10,0	1/1:10,10:19:21.05:228,21,0	1/1:14,12:30:29.88:252,30,0	0/1:15,0:15:12.03:38,0,12	0/0:15,0:15:7.54:0,8,65	0/0:21,0:21:7:0,7,37	0/0:32,0:28:14.88:0,15,137	0/1:24,0:28:5.55:41,0,6	0/0:14,0:25:2.58:0,3,10	1/1:25,0:30:2.71:14,3,0	0/1:13,8:22:16.01:96,0,16	0/0:20,0:19:32.61:0,33,267	0/0:22,0:21:15.88:0,16,132	0/0:9,0:8:2.97:0,3,20
chr10	42198011	.	AT	A	4891.37	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=13.490;DP=669;FS=1.081;HRun=7;HaplotypeScore=63.1987;InbreedingCoeff=0.9996;MQ=79.93;MQ0=0;MQRankSum=-2.067;QD=24.34;ReadPosRankSum=2.095;VQSLOD=5.2314;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:90.27:0,90,1117	0/0:14,0:14:42.12:0,42,512	0/0:17,0:17:39.11:0,39,465	0/0:20,0:20:47.67:0,48,530	1/1:4,26:30:63.13:642,63,0	0/0:29,0:29:69.18:0,69,850	0/0:27,0:27:78.23:0,78,962	0/0:40,0:40:99:0,105,1288	1/1:4,24:28:57.13:581,57,0	1/1:1,21:22:63.13:638,63,0	1/1:1,20:21:57.13:581,57,0	0/0:21,0:21:63.19:0,63,781	0/0:18,0:18:48.14:0,48,591	0/0:18,0:18:51.16:0,51,642	1/1:0,15:15:42.10:428,42,0	1/1:3,30:33:81.18:826,81,0	0/0:28,0:28:78.25:0,78,981	1/1:1,22:23:60.14:612,60,0	0/0:22,0:22:54.17:0,54,679	0/0:37,0:37:99:0,99,1232	0/0:21,0:21:51.16:0,51,635	0/0:22,0:22:60.18:0,60,742	0/0:26,0:26:72.22:0,72,893	0/0:20,0:20:60.18:0,60,742	1/1:5,24:29:57.12:582,57,0	0/0:23,0:23:66.21:0,66,830	0/0:23,0:23:66.15:0,66,777	0/0:9,0:9:24.08:0,24,302
chr10	42198933	.	G	GA	7233.72	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-14.856;DP=700;FS=0.322;HRun=3;HaplotypeScore=66.9780;InbreedingCoeff=0.9677;MQ=87.33;MQ0=0;MQRankSum=-4.263;QD=38.48;ReadPosRankSum=-2.720;VQSLOD=4.0333;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:78.25:0,78,1011	0/0:11,0:11:33.11:0,33,428	0/0:23,0:23:69.20:0,69,863	0/0:26,0:26:74.72:0,75,917	0/0:39,0:39:99:0,114,1446	0/0:31,0:31:87.27:0,87,1115	0/0:30,0:30:87.27:0,87,1114	1/1:2,38:40:99:1642,114,0	0/0:27,0:27:75.23:0,75,958	0/0:24,0:24:72.23:0,72,935	0/0:20,0:20:57.19:0,57,739	0/0:23,0:23:69.22:0,69,896	0/0:28,0:28:81.24:0,81,1021	0/0:16,0:16:45.15:0,45,582	0/0:33,0:33:96.31:0,96,1246	0/0:31,0:31:93.30:0,93,1207	0/0:15,0:15:45.15:0,45,582	0/0:20,0:20:60.17:0,60,758	1/1:5,22:27:69.23:1031,69,0	1/1:0,35:35:99:1475,99,0	1/1:1,21:22:48.16:719,48,0	0/0:25,0:25:72.20:0,72,903	0/0:21,0:21:60.19:0,60,778	0/0:12,0:12:36.12:0,36,465	0/0:29,0:29:87.28:0,87,1130	1/1:3,29:32:51.32:1241,51,0	1/1:1,30:31:72.62:1080,73,0	1/1:0,1:1:3.01:45,3,0
chr10	42199590	.	G	GA	9630.52	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=-2.292;DP=746;FS=0.302;HRun=9;HaplotypeScore=87.5077;InbreedingCoeff=0.9907;MQ=77.56;MQ0=1;MQRankSum=-2.621;QD=21.07;ReadPosRankSum=0.101;VQSLOD=5.1666;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,48:55:99:1433,132,0	0/0:15,0:15:11.84:0,12,332	0/0:21,0:21:50.95:0,51,436	0/0:10,0:10:14.99:0,15,130	1/1:5,24:29:84.18:894,84,0	0/0:17,0:17:41.96:0,42,361	0/0:25,0:25:53.97:0,54,469	1/1:3,30:34:70.04:983,70,0	1/1:3,26:30:69.02:742,69,0	1/1:5,2:33:80.58:461,81,0	1/1:2,0:15:31.46:165,31,0	0/0:27,0:28:71.01:0,71,605	0/0:39,0:39:99:0,102,878	0/0:20,0:20:56.99:0,57,494	1/1:2,0:35:82.54:418,83,0	1/1:9,27:36:72.19:797,72,0	0/0:26,0:26:65.97:0,66,573	1/1:7,1:28:59.81:308,60,0	1/1:6,16:22:25.06:492,25,0	1/1:8,23:32:68.76:653,69,0	1/1:3,20:23:48.13:531,48,0	0/0:24,0:24:56.97:0,57,495	0/0:30,0:31:58.95:0,59,495	0/0:32,0:33:89.02:0,89,761	1/1:3,0:24:39.77:199,40,0	1/1:3,20:24:56.99:612,57,0	1/1:6,25:31:72.19:796,72,0	1/1:0,4:5:14.87:147,15,0
chr10	42199821	.	GT	G	5926.59	PASS	AC=12;AF=0.222;AN=54;BaseQRankSum=12.057;DP=824;FS=2.178;HRun=5;HaplotypeScore=85.0511;InbreedingCoeff=0.9996;MQ=88.57;MQ0=0;MQRankSum=-5.751;QD=32.04;ReadPosRankSum=-1.387;VQSLOD=4.7022;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,135,1820	0/0:8,0:8:24.08:0,24,328	0/0:33,0:33:93.28:0,93,1195	0/0:31,0:31:65.70:0,66,962	0/0:36,0:36:99:0,108,1455	0/0:22,0:22:57.19:0,57,778	0/0:28,0:28:75.25:0,75,1026	1/1:0,41:41:99:1343,123,0	0/0:41,0:41:99:0,123,1662	0/0:26,0:26:78.26:0,78,1065	0/0:24,0:24:69.23:0,69,944	0/0:27,0:27:81.23:0,81,1088	0/0:33,0:33:96.31:0,96,1296	0/0:34,0:34:96.29:0,96,1281	0/0:44,0:44:99:0,129,1748	0/0:40,0:40:99:0,114,1495	0/0:24,0:24:69.21:0,69,913	0/0:26,0:26:75.20:0,75,994	1/1:0,23:23:69.19:773,69,0	1/1:2,34:36:96.27:1089,96,0	1/1:2,19:21:54.15:612,54,0	0/0:30,0:30:84.26:0,84,1127	0/0:32,0:32:96.29:0,96,1273	0/0:28,0:28:72.24:0,72,984	0/0:26,0:26:78.25:0,78,1052	1/1:1,29:30:87.25:986,87,0	1/1:0,34:34:99:1123,99,0	./.
chr10	42201543	.	A	ATTCAATGCTCTT	1196.71	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=0.916;DP=640;FS=7.506;HRun=0;HaplotypeScore=212.0924;InbreedingCoeff=0.9689;MQ=90.35;MQ0=0;MQRankSum=-5.143;QD=92.05;ReadPosRankSum=-1.367;VQSLOD=2.1665;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,5:13:27.09:1291,27,0	0/0:11,0:11:33.11:0,33,1241	0/0:21,0:21:54.08:0,54,1562	0/0:28,0:28:77.29:0,77,2224	0/0:23,0:23:63.17:0,63,2067	0/0:20,0:20:60.21:0,60,2209	0/0:26,0:26:66.23:0,66,2416	0/0:28,0:28:75.25:0,75,2635	0/0:16,0:16:48.16:0,48,1730	0/0:29,0:29:87.30:0,87,3178	0/0:19,0:19:57.18:0,57,2045	0/0:28,0:28:78.26:0,78,2747	0/0:22,0:22:66.21:0,66,2340	0/0:29,0:29:84.28:0,84,3041	0/0:37,0:37:99:0,105,3809	0/0:20,0:20:60.21:0,60,2114	0/0:21,0:21:63.22:0,63,2272	0/0:18,0:18:54.17:0,54,1884	0/0:13,0:13:36.11:0,36,1135	0/0:30,0:30:87.28:0,87,3055	0/0:18,0:18:51.16:0,51,1708	0/0:14,0:14:42.14:0,42,1580	0/0:29,0:29:87.30:0,87,3125	0/0:29,0:29:87.28:0,87,3128	0/0:26,0:26:75.25:0,75,2630	0/0:32,0:32:93.32:0,93,3393	0/0:36,0:36:99:0,105,3674	0/0:4,0:4:12.04:0,12,413
chr10	42202940	.	C	CAGAGAGAGAAAG	6552.80	PASS	AB=0.994;AC=28;AF=0.500;AN=56;BaseQRankSum=1.428;DP=759;FS=7.409;HRun=0;HaplotypeScore=266.6791;InbreedingCoeff=0.5102;MQ=58.93;MQ0=6;MQRankSum=-5.998;QD=14.76;ReadPosRankSum=-4.567;VQSLOD=1.3049;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:29:0.47:2,0,0	0/0:4,0:6:15.01:0,15,201	0/0:32,0:25:41.79:0,42,358	0/0:34,0:20:18.90:0,19,242	1/1:26,0:25:41.14:347,41,0	0/0:34,0:38:55.61:0,56,916	0/1:24,0:26:36.71:37,0,827	1/1:40,0:40:58.55:861,59,0	1/1:40,0:39:81.42:690,81,0	0/1:23,0:28:99:269,0,188	0/1:21,0:22:99:151,0,462	0/0:18,0:24:44.97:0,45,686	0/0:26,0:39:76.91:0,77,873	0/0:19,0:25:53.86:0,54,565	0/1:26,0:27:99:326,0,472	1/1:5,19:29:6:306,6,0	0/0:21,0:30:65.24:0,65,788	0/1:18,0:18:99:100,0,212	1/1:19,0:19:49.15:737,49,0	1/1:28,0:28:35.02:267,35,0	1/1:24,0:23:36.31:283,36,0	0/0:27,0:28:68.83:0,69,786	0/0:26,0:28:62.90:0,63,662	0/0:29,0:29:50.99:0,51,1032	0/1:19,0:19:99:169,0,535	1/1:33,0:32:70.24:1361,70,0	1/1:12,15:30:22.34:500,22,0	1/1:4,0:4:4.81:147,5,0
chr10	42202944	.	G	GAGAGAA	4884.90	PASS	AB=1.000;AC=26;AF=0.464;AN=56;BaseQRankSum=1.915;DP=746;FS=10.274;HRun=0;HaplotypeScore=197.5237;InbreedingCoeff=0.5225;MQ=57.51;MQ0=10;MQRankSum=-5.541;QD=12.09;ReadPosRankSum=-3.158;VQSLOD=2.7945;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,22:30:5.91:59,6,0	0/0:8,0:8:18:0,18,203	0/0:30,0:21:41.77:0,42,357	0/0:32,0:17:18.77:0,19,242	1/1:27,0:26:41.14:349,41,0	0/0:36,0:36:74.72:0,75,858	0/0:26,0:26:11.75:0,12,732	1/1:36,0:36:11.74:747,12,0	1/1:40,0:39:61.52:629,62,0	0/1:25,0:25:99:261,0,135	0/1:21,0:21:99:147,0,163	0/0:23,0:22:44.97:0,45,483	0/0:41,0:41:86.57:0,87,718	0/0:25,0:25:53.86:0,54,483	0/1:29,0:29:99:319,0,188	1/1:24,0:24:8.96:130,9,0	0/0:32,0:31:65.91:0,66,567	0/1:15,0:15:44.39:100,0,44	1/1:20,0:20:23.08:417,23,0	1/1:30,0:30:13.17:241,13,0	1/1:24,0:22:14.77:258,15,0	0/0:30,0:30:71.47:0,71,735	0/0:28,0:28:65.90:0,66,626	0/0:31,0:31:53.97:0,54,790	0/1:19,0:19:99:170,0,159	1/1:30,0:29:63.18:741,63,0	0/1:27,0:25:5.60:272,0,6	1/1:6,0:6:3.76:44,4,0
chr10	42205459	.	G	GCC	938.96	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-7.746;DP=506;FS=9.460;HRun=7;HaplotypeScore=60.2144;InbreedingCoeff=0.9836;MQ=90.51;MQ0=0;MQRankSum=-1.598;QD=36.11;ReadPosRankSum=1.173;VQSLOD=2.6590;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,23:26:63.22:1034,63,0	0/0:10,0:10:30.09:0,30,350	0/0:25,0:25:61.36:0,61,687	0/0:20,0:20:46.91:0,47,507	0/0:20,0:20:54.14:0,54,619	0/0:21,0:21:60.16:0,60,688	0/0:15,0:15:39.11:0,39,454	0/0:21,0:21:54.14:0,54,620	0/0:15,0:15:42.11:0,42,478	0/0:17,0:17:45.12:0,45,524	0/0:24,0:24:69.20:0,69,802	0/0:18,0:18:51.15:0,51,594	0/0:14,0:14:42.12:0,42,489	0/0:17,0:17:42.11:0,42,489	0/0:16,0:16:42.12:0,42,489	0/0:17,0:17:48.12:0,48,539	0/0:23,0:23:63.17:0,63,723	0/0:16,0:16:45.13:0,45,524	0/0:26,0:26:66.19:0,66,769	0/0:23,0:23:69.18:0,69,784	0/0:14,0:14:39.12:0,39,454	0/0:15,0:15:42.12:0,42,489	0/0:20,0:20:54.14:0,54,619	0/0:14,0:13:39.12:0,39,455	0/0:15,0:15:45.13:0,45,524	0/0:18,0:18:48.14:0,48,559	0/0:21,0:21:63.19:0,63,734	0/0:5,0:5:15.04:0,15,175
chr10	42205865	.	C	CCACCCACTCCATCCAGCCA	4523.21	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=1.470;DP=458;FS=1.829;HRun=0;HaplotypeScore=228.0138;InbreedingCoeff=0.8340;MQ=75.03;MQ0=0;MQRankSum=-7.562;QD=70.68;ReadPosRankSum=-1.465;VQSLOD=4.4772;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:36.12:0,36,1407	0/0:1,0:1:3.01:0,3,92	0/0:14,0:14:15.05:0,15,444	0/0:9,0:9:11.97:0,12,326	0/0:11,0:11:18.06:0,18,831	0/0:11,0:11:12.04:0,12,409	0/0:33,0:33:57.17:0,57,2326	0/0:16,0:16:21.07:0,21,683	0/0:11,0:11:27.09:0,27,1182	1/1:8,6:14:29.98:1432,30,0	0/0:6,7:14:0.84:0,1,2	0/0:27,0:27:63.22:0,63,2630	0/0:19,0:19:47.33:0,47,1961	0/0:27,0:27:33.11:0,33,1335	1/1:15,3:19:30.10:1462,30,0	0/0:18,0:18:39.13:0,39,1854	0/0:34,0:33:84.29:0,84,3742	1/1:19,0:19:24.08:1494,24,0	0/0:7,0:7:12.04:0,12,312	0/0:11,0:11:14.94:0,15,755	0/0:32,0:32:69.24:0,69,2762	0/0:11,0:11:15.04:0,15,530	0/0:13,0:13:30.10:0,30,1223	0/0:15,0:15:33.11:0,33,1312	1/1:7,5:12:6.02:134,6,0	0/0:15,0:15:33.11:0,33,1554	0/0:17,0:17:30.09:0,30,1180	0/0:5,0:5:9.03:0,9,408
chr10	42207114	.	AGAAGGAAG	A	1323.28	PASS	AB=0.929;AC=18;AF=0.360;AN=50;BaseQRankSum=4.529;DP=344;FS=20.356;HRun=0;HaplotypeScore=96.9831;InbreedingCoeff=0.6399;MQ=60.03;MQ0=0;MQRankSum=-3.137;QD=12.14;ReadPosRankSum=-1.079;VQSLOD=0.7540;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:18:32.84:0,33,448	0/0:4,0:4:9.03:0,9,176	./.	./.	1/1:26,0:26:41.66:475,42,0	1/1:5,7:12:6.02:152,6,0	0/1:7,0:7:18.77:162,0,19	0/0:25,0:25:33.09:0,33,504	1/1:16,0:16:21:111,21,0	0/0:17,0:17:30.08:0,30,745	0/0:13,0:13:18.05:0,18,412	0/1:5,0:6:7.16:7,0,19	1/1:4,5:9:3.01:76,3,0	0/0:5,0:5:3.88:0,4,27	0/0:13,0:13:18.06:0,18,412	1/1:16,0:16:37.67:295,38,0	0/0:18,0:18:18.83:0,19,143	0/0:8,0:8:12.04:0,12,264	./.	0/0:15,0:15:20.93:0,21,298	0/0:25,0:25:24.08:0,24,408	1/1:2,2:4:3.01:73,3,0	1/1:4,7:11:1.74:74,2,0	1/1:2,0:2:3.01:69,3,0	0/0:9,0:9:24.08:0,24,724	0/0:12,0:12:18.06:0,18,378	0/0:14,0:14:30.09:0,30,524	0/0:8,0:8:11.99:0,12,184
chr10	42207146	.	GGA	G	188.11	PASS	AB=0.836;AC=7;AF=0.135;AN=52;BaseQRankSum=8.611;DP=281;FS=24.858;HRun=0;HaplotypeScore=71.0973;InbreedingCoeff=-0.0083;MQ=51.75;MQ0=7;MQRankSum=-2.673;QD=2.16;ReadPosRankSum=6.533;VQSLOD=-0.2473;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:22:60.49:0,60,873	0/0:5,0:4:9.03:0,9,180	./.	./.	0/1:16,7:21:72.42:72,0,76	0/1:9,0:8:3.67:4,0,37	0/0:7,0:7:11.28:0,11,123	0/0:27,0:24:66.12:0,66,1034	0/1:13,6:19:99:100,0,164	0/0:11,0:11:30.10:0,30,552	0/0:5,0:5:15.05:0,15,270	0/0:4,0:4:6.10:0,6,49	1/1:5,0:5:1.82:5,2,0	0/0:3,0:3:8.90:0,9,61	0/0:9,0:9:27.09:0,27,479	0/1:16,7:23:98.87:99,0,146	0/0:10,0:10:26.43:0,26,196	0/1:7,1:8:19.34:19,0,296	0/0:3,0:3:7.27:0,7,90	0/0:10,0:10:30.07:0,30,463	0/0:22,0:22:24.03:0,24,405	0/0:6,0:6:10.63:0,11,171	0/0:8,0:8:0.12:0,0,40	0/0:1,0:1:2.80:0,3,13	0/0:10,0:10:30.10:0,30,573	0/0:7,0:7:21.07:0,21,390	0/0:13,0:13:36.04:0,36,555	0/0:8,0:8:23.86:0,24,232
chr10	42207148	.	AAGGG	A	1472.82	PASS	AB=1.000;AC=26;AF=0.542;AN=48;BaseQRankSum=-0.770;DP=278;FS=9.157;HRun=0;HaplotypeScore=75.2910;InbreedingCoeff=-0.0545;MQ=51.31;MQ0=9;MQRankSum=-0.943;QD=6.49;ReadPosRankSum=3.936;VQSLOD=0.4898;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:22:23.54:0,24,198	0/0:6,0:5:3:0,3,27	./.	./.	0/1:22,0:20:25:143,0,25	0/1:9,0:8:10.91:11,0,12	0/0:8,0:7:8.62:0,9,55	1/1:16,8:21:14.80:105,15,0	0/1:19,0:19:99:154,0,180	0/1:10,0:10:36.86:37,0,175	0/1:5,0:5:15.95:16,0,78	1/1:4,0:4:3:26,3,0	0/1:6,0:6:5.87:6,0,21	./.	0/1:8,0:8:58.94:59,0,70	0/1:24,0:24:99:146,0,158	0/1:9,0:9:0:0,0,0	0/1:8,0:8:36.20:36,0,54	./.	1/1:5,5:10:17.84:162,18,0	1/1:7,16:22:6.02:99,6,0	0/0:6,0:6:4.07:0,4,97	0/1:8,0:8:3.91:4,0,21	0/0:2,0:2:1.25:0,1,3	0/1:11,0:11:52.91:53,0,173	1/1:7,0:7:6.01:57,6,0	1/1:12,0:12:17.95:204,18,0	1/1:8,0:8:24:305,24,0
chr10	42207723	.	AAATCTACTTC	A	5672.56	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=11.595;DP=665;FS=2.344;HRun=0;HaplotypeScore=201.2679;InbreedingCoeff=0.9878;MQ=72.80;MQ0=0;MQRankSum=-12.241;QD=76.66;ReadPosRankSum=0.753;VQSLOD=4.6943;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:90.31:0,90,4519	0/0:5,0:5:12.04:0,12,636	0/0:16,0:16:29.74:0,30,1034	0/0:14,0:14:33.11:0,33,1010	1/1:2,27:29:66.23:2151,66,0	0/0:32,0:32:93.32:0,93,4840	0/0:18,0:18:54.17:0,54,2690	0/0:32,0:32:90.31:0,90,4600	1/1:2,18:20:54.19:1742,54,0	0/0:33,0:33:99:0,99,5084	0/0:22,0:22:63.22:0,63,3145	0/0:22,0:22:63.22:0,63,3280	0/0:32,0:32:93.32:0,93,4738	0/0:17,0:17:51.18:0,51,2619	0/0:37,0:37:99:0,111,5541	1/1:4,21:25:54.19:1779,54,0	0/0:21,0:21:57.18:0,57,2761	0/0:25,0:25:72.25:0,72,3784	0/0:33,0:33:99:0,99,4835	0/0:33,0:33:99:0,99,5060	0/0:8,0:8:24.08:0,24,1270	0/0:17,0:17:51.18:0,51,2615	0/0:21,0:21:63.22:0,63,3337	0/0:24,0:24:69.24:0,69,3515	0/0:23,0:23:69.24:0,69,3571	0/0:33,0:33:96.33:0,96,4938	0/0:32,0:32:96.33:0,96,4952	0/0:9,0:9:27.09:0,27,1309
chr10	42209539	.	AT	A	2271.75	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=11.041;DP=614;FS=1.423;HRun=8;HaplotypeScore=58.6363;InbreedingCoeff=0.9944;MQ=78.21;MQ0=0;MQRankSum=-5.739;QD=23.66;ReadPosRankSum=2.381;VQSLOD=4.4904;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,12:13:36.06:348,36,0	0/0:6,0:6:15.05:0,15,181	0/0:17,0:17:35.88:0,36,365	0/0:9,0:9:25.28:0,25,265	1/1:2,30:32:87.14:840,87,0	0/0:25,0:25:72.17:0,72,842	0/0:19,0:19:45.13:0,45,533	0/0:34,0:34:81.25:0,81,979	1/1:1,22:23:57.09:550,57,0	0/0:37,0:37:99:0,99,1171	0/0:27,0:27:75.23:0,75,906	0/0:16,0:16:48.15:0,48,580	0/0:20,0:20:57.17:0,57,689	0/0:26,0:26:72.21:0,72,857	0/0:19,0:19:54.17:0,54,652	1/1:3,25:28:72.11:694,72,0	0/0:24,0:24:72.21:0,72,859	0/0:22,0:22:60.18:0,60,725	0/0:33,0:33:84.26:0,84,1015	0/0:41,0:41:99:0,111,1317	0/0:11,0:11:33.10:0,33,399	0/0:21,0:21:63.18:0,63,750	0/0:21,0:21:60.16:0,60,703	0/0:19,0:19:57.17:0,57,688	0/0:19,0:19:54.16:0,54,643	0/0:24,0:24:63.18:0,63,751	0/0:19,0:18:54.03:0,54,609	0/0:9,0:9:24.06:0,24,277
chr10	42210102	.	C	CA	1538.61	PASS	AB=1.000;AC=7;AF=0.130;AN=54;BaseQRankSum=-6.618;DP=584;FS=5.659;HRun=9;HaplotypeScore=74.1384;InbreedingCoeff=0.8241;MQ=78.89;MQ0=0;MQRankSum=-0.630;QD=16.91;ReadPosRankSum=1.062;VQSLOD=3.8088;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:15,2:17:8.81:0,9,305	0/0:9,0:9:23.99:0,24,208	0/1:21,0:19:8.55:9,0,164	0/0:12,0:12:31.96:0,32,253	1/1:3,23:27:68.90:704,69,0	0/0:22,0:22:56.96:0,57,495	0/0:17,1:18:14.79:0,15,353	0/0:33,0:33:80.97:0,81,701	1/1:3,14:17:33.09:365,33,0	0/0:28,0:27:77.97:0,78,674	0/0:16,0:16:44.99:0,45,390	0/0:17,0:18:47:0,47,393	0/0:26,0:26:71.98:0,72,625	0/0:18,0:18:41.98:0,42,365	0/0:21,0:21:50.99:0,51,442	1/1:4,19:26:59.66:607,60,0	0/0:34,0:34:78.43:0,78,677	0/0:17,0:17:36.06:0,36,330	0/0:18,0:18:47.98:0,48,417	0/0:28,0:28:65.96:0,66,573	0/0:6,0:7:14.02:0,14,110	0/0:16,0:16:35.96:0,36,313	0/0:31,0:31:74.96:0,75,651	0/0:11,0:11:23.77:0,24,208	0/0:22,2:24:20.78:0,21,407	0/0:23,0:23:62.98:0,63,547	0/0:45,0:45:99:0,114,982	./.
chr10	42212173	.	TTC	T	1527.16	PASS	AB=0.858;AC=15;AF=0.268;AN=56;BaseQRankSum=-1.039;DP=505;FS=10.875;HRun=0;HaplotypeScore=160.6470;InbreedingCoeff=0.6859;MQ=64.84;MQ0=9;MQRankSum=-1.036;QD=8.30;ReadPosRankSum=-1.702;VQSLOD=2.3622;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:33.11:0,33,535	0/0:8,0:8:21.04:0,21,291	0/0:43,0:19:7.38:0,7,133	0/1:67,1:32:21.44:21,0,211	0/0:19,0:19:51.17:0,51,709	0/0:19,0:19:31.69:0,32,651	0/1:22,2:23:17.10:17,0,591	1/1:7,13:20:48.13:561,48,0	0/0:19,0:19:45.14:0,45,616	0/0:17,0:17:42.14:0,42,626	0/0:12,0:12:30.08:0,30,400	0/0:14,0:13:39.11:0,39,517	0/0:16,0:16:45.15:0,45,625	0/0:16,0:16:42.10:0,42,600	0/0:13,0:13:27.09:0,27,393	0/0:20,0:20:54.17:0,54,762	0/0:11,0:11:21.03:0,21,280	0/0:9,0:8:19.57:0,20,252	1/1:11,6:17:27.07:317,27,0	1/1:4,9:12:15.01:159,15,0	1/1:2,5:7:17.92:164,18,0	0/0:15,0:15:38.99:0,39,525	0/0:15,0:15:33.09:0,33,456	0/0:17,0:17:30.10:0,30,429	0/0:22,0:22:58.74:0,59,818	0/1:6,6:12:58.57:289,0,59	1/1:7,2:9:8.99:93,9,0	1/1:10,3:12:8.99:94,9,0
chr10	42212198	.	T	TC	10471.27	PASS	AB=0.805;AC=52;AF=0.929;AN=56;BaseQRankSum=-4.183;DP=463;FS=0.000;HRun=2;HaplotypeScore=168.1448;InbreedingCoeff=0.3742;MQ=57.50;MQ0=12;MQRankSum=-0.429;QD=24.41;ReadPosRankSum=2.621;VQSLOD=4.6390;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:16:31.77:292,32,0	1/1:0,6:6:18.06:257,18,0	0/0:34,0:16:13.49:0,13,195	0/1:74,1:26:19.28:19,0,224	1/1:2,13:15:35.84:503,36,0	1/1:2,13:16:45.13:609,45,0	1/1:8,10:17:15.44:436,15,0	1/1:11,19:30:54.18:754,54,0	1/1:2,16:17:45.15:637,45,0	1/1:2,13:15:44.89:611,45,0	1/1:2,7:9:11.94:171,12,0	1/1:2,15:16:42.14:585,42,0	1/1:0,12:12:36.12:512,36,0	1/1:2,11:13:36.11:508,36,0	1/1:1,9:10:27.07:353,27,0	1/1:3,20:21:57.66:816,58,0	1/1:6,9:15:27.09:380,27,0	0/1:2,4:6:0.50:117,0,1	1/1:7,9:15:36.12:497,36,0	1/1:5,4:8:12.04:159,12,0	1/1:1,5:5:6.02:79,6,0	1/1:2,11:13:27.08:367,27,0	1/1:7,7:14:30.06:393,30,0	1/1:5,9:15:17.16:222,17,0	1/1:1,21:22:60.02:780,60,0	1/1:3,8:11:24.08:332,24,0	1/1:2,1:2:3.01:40,3,0	1/1:3,1:3:3.01:41,3,0
chr10	42212199	.	C	CT	5959.13	PASS	AB=0.976;AC=47;AF=0.839;AN=56;BaseQRankSum=-0.729;DP=469;FS=6.497;HRun=1;HaplotypeScore=189.3924;InbreedingCoeff=0.0841;MQ=55.86;MQ0=12;MQRankSum=-0.232;QD=13.67;ReadPosRankSum=6.661;VQSLOD=4.2466;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,12:15:30.30:490,30,0	1/1:6,0:6:17.96:151,18,0	0/0:33,0:16:17.25:0,17,268	0/1:75,0:25:23.65:24,0,247	1/1:15,0:15:35.49:274,35,0	1/1:16,0:16:44.65:366,45,0	0/1:17,0:16:20.96:161,0,21	0/1:31,0:31:7.39:344,0,7	1/1:19,0:18:44.41:344,44,0	1/1:16,0:16:43.09:306,43,0	1/1:10,0:10:11.96:94,12,0	1/1:18,0:17:35.19:321,35,0	1/1:13,0:13:35.88:285,36,0	1/1:13,0:13:35.74:280,36,0	1/1:10,0:10:23.47:177,23,0	1/1:23,0:21:55.86:444,56,0	0/1:15,1:16:13.89:188,0,14	0/1:5,0:5:1.04:51,0,1	1/1:17,0:16:16.53:286,17,0	1/1:8,0:7:11.93:93,12,0	1/1:7,0:6:5.94:40,6,0	1/1:14,0:14:22.67:201,23,0	1/1:14,0:15:28.61:224,29,0	0/1:14,2:16:26.29:101,0,26	1/1:22,0:22:59.62:462,60,0	1/1:11,0:11:11.25:170,11,0	1/1:4,0:3:8.91:67,9,0	0/1:4,0:3:11.07:15,0,11
chr10	42212200	.	CT	C	1315.30	PASS	AB=0.997;AC=41;AF=0.732;AN=56;BaseQRankSum=4.141;DP=463;FS=6.833;HRun=1;HaplotypeScore=202.7763;InbreedingCoeff=0.2245;MQ=58.19;MQ0=14;MQRankSum=-2.779;QD=3.83;ReadPosRankSum=7.881;VQSLOD=-0.0635;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:21.74:0,22,145	1/1:6,0:6:13.62:59,14,0	0/1:33,1:17:27.13:27,0,158	0/0:73,3:25:22.75:0,23,261	1/1:16,0:16:27.66:111,28,0	1/1:16,0:16:23.76:87,24,0	0/1:16,0:15:4.39:4,0,79	0/0:29,0:28:10.60:0,11,90	1/1:19,0:18:21.55:114,22,0	0/1:15,0:16:21.93:41,0,22	1/1:8,1:9:9.58:34,10,0	0/1:18,0:17:11.46:77,0,11	1/1:13,0:13:18.72:88,19,0	0/1:13,0:13:10.10:48,0,10	1/1:12,0:12:21.71:113,22,0	1/1:23,0:21:20.60:104,21,0	0/1:14,0:15:28.67:35,0,29	0/1:5,0:5:0.64:1,0,17	0/1:15,0:14:16.06:24,0,16	1/1:8,0:7:9.35:36,9,0	1/1:7,0:6:3.87:11,4,0	1/1:15,0:15:19.32:76,19,0	1/1:15,0:15:25.24:134,25,0	1/1:15,0:15:9.56:54,10,0	1/1:22,0:22:44.81:182,45,0	0/1:10,0:10:7:16,0,7	1/1:3,0:2:1.82:5,2,0	1/1:2,0:1:1.25:3,1,0
chr10	42212208	.	CCCT	C	12484.06	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-3.798;DP=415;FS=1.682;HRun=0;HaplotypeScore=162.3762;InbreedingCoeff=0.7615;MQ=60.51;MQ0=13;MQRankSum=-2.414;QD=40.01;ReadPosRankSum=5.528;VQSLOD=5.4935;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,4:13:19.11:183,19,0	1/1:0,6:6:18.06:326,18,0	0/0:32,1:15:20.19:0,20,369	0/0:67,0:25:29.81:0,30,494	1/1:0,15:15:29.93:529,30,0	1/1:0,12:13:36.12:648,36,0	1/1:1,7:9:18.06:327,18,0	1/1:0,23:24:57.09:942,57,0	1/1:1,16:17:45.15:799,45,0	1/1:2,10:13:39.08:625,39,0	1/1:3,4:8:12.04:215,12,0	1/1:1,14:16:45.15:780,45,0	1/1:0,14:14:36.12:652,36,0	1/1:1,9:10:27.09:465,27,0	1/1:0,14:14:36.12:566,36,0	1/1:0,23:21:60.20:1065,60,0	1/1:0,13:14:39.12:658,39,0	1/1:1,2:3:8.52:117,9,0	1/1:1,11:12:36.12:637,36,0	1/1:1,4:5:12.04:217,12,0	1/1:2,4:6:8.98:127,9,0	1/1:2,8:11:24.04:399,24,0	1/1:1,12:14:21.07:353,21,0	1/1:0,11:13:20.83:334,21,0	1/1:4,18:22:57.19:976,57,0	1/1:0,8:8:24.08:435,24,0	1/1:1,1:3:3.01:55,3,0	1/1:0,1:1:3.01:55,3,0
chr10	42212233	.	CCT	C	99.96	PASS	AB=0.942;AC=10;AF=0.179;AN=56;BaseQRankSum=-4.180;DP=408;FS=34.340;HRun=0;HaplotypeScore=177.0530;InbreedingCoeff=-0.0179;MQ=52.14;MQ0=16;MQRankSum=0.750;QD=0.68;ReadPosRankSum=-0.753;VQSLOD=1.2777;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:13,3:16:18.33:0,18,213	0/0:5,0:5:4.05:0,4,113	0/1:24,0:8:2.94:3,0,47	0/1:42,0:12:6.93:7,0,138	0/0:14,0:14:21.84:0,22,256	0/0:18,2:18:13.72:0,14,451	0/0:11,2:11:14.50:0,14,186	0/1:23,1:22:8.40:8,0,647	0/0:23,0:20:48.02:0,48,531	0/0:13,0:12:14.16:0,14,380	0/0:7,1:8:4.26:0,4,42	0/0:18,0:17:36.07:0,36,442	0/0:13,2:13:26.30:0,26,332	0/0:8,1:9:18.02:0,18,222	0/0:20,0:20:17.57:0,18,400	0/0:22,0:20:44.92:0,45,528	0/1:17,0:17:2.66:3,0,517	0/1:4,0:4:11.75:12,0,83	0/1:8,1:8:15.11:15,0,196	0/0:6,0:6:9.03:0,9,111	0/0:7,0:5:4.25:0,4,39	0/1:12,2:14:61.60:62,0,195	0/0:13,3:16:24.08:0,24,310	0/0:13,0:12:15.78:0,16,165	0/0:21,0:21:30.86:0,31,538	0/1:6,2:8:50.03:50,0,192	1/1:3,2:4:8.05:71,8,0	0/0:2,0:1:3.01:0,3,37
chr10	42214378	.	CATCT	C	3728.16	PASS	AB=0.745;AC=23;AF=0.460;AN=50;BaseQRankSum=1.825;DP=614;FS=4.038;HRun=0;HaplotypeScore=135.7878;InbreedingCoeff=0.7069;MQ=59.85;MQ0=10;MQRankSum=-1.550;QD=11.95;ReadPosRankSum=3.649;VQSLOD=3.2103;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:19,0:27:0.83:16,0,1	0/0:10,0:10:15.05:0,15,329	./.	./.	1/1:12,16:28:39.02:549,39,0	0/0:8,0:24:33.10:0,33,576	0/0:12,0:17:3.64:0,4,118	./.	1/1:10,16:26:33.11:509,33,0	0/0:17,0:28:39.09:0,39,613	0/0:25,0:25:45.15:0,45,1051	0/0:11,0:19:18.06:0,18,314	0/0:14,0:27:33.11:0,33,570	0/0:10,0:18:15.04:0,15,234	1/1:11,11:22:27.09:417,27,0	1/1:8,4:12:12.04:185,12,0	0/0:15,0:16:24.08:0,24,556	0/1:13,5:19:78.07:168,0,78	1/1:8,0:11:12.01:110,12,0	1/1:17,0:33:15.47:134,15,0	1/1:12,0:10:2.59:27,3,0	0/0:11,0:27:33.11:0,33,575	0/0:16,0:23:24.08:0,24,423	0/0:9,0:9:5.90:0,6,138	1/1:20,17:38:45.15:676,45,0	0/1:15,0:32:99:306,0,109	1/1:18,13:31:30.10:463,30,0	1/1:5,0:18:18.02:168,18,0
chr10	42215456	.	A	ACACACG	7208.83	PASS	AB=0.558;AC=15;AF=0.268;AN=56;BaseQRankSum=-4.583;DP=776;FS=1.372;HRun=0;HaplotypeScore=175.2795;InbreedingCoeff=0.8945;MQ=65.07;MQ0=2;MQRankSum=-9.777;QD=28.05;ReadPosRankSum=-3.842;VQSLOD=3.5534;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:14,52:67:0:0,0,0	0/0:15,0:15:36.12:0,36,795	0/0:37,0:34:79.89:0,80,1414	0/0:30,0:25:60.14:0,60,1288	0/0:26,0:26:66.23:0,66,1493	0/0:19,0:19:45.14:0,45,973	0/0:25,0:25:66.12:0,66,1325	1/1:21,5:26:72.11:1801,72,0	0/0:20,0:20:48.15:0,48,1042	0/0:21,0:21:51.17:0,51,1091	0/0:19,0:19:51.14:0,51,1106	0/0:36,0:36:96.31:0,96,2094	0/0:16,0:16:45.15:0,45,974	0/0:37,0:37:93.24:0,93,1925	0/0:30,0:30:42.14:0,42,926	0/0:15,0:15:33.10:0,33,704	0/0:37,0:37:99:0,101,2103	0/0:37,0:37:74.64:0,75,1466	1/1:15,4:19:45.04:1005,45,0	1/1:18,15:33:13.92:285,14,0	1/1:29,12:38:2.63:18,3,0	0/0:27,0:27:72.25:0,72,1629	0/0:20,0:20:57.20:0,57,1284	0/0:29,0:29:81.28:0,81,1781	0/0:23,0:22:33.11:0,33,747	1/1:20,24:43:89.39:3346,89,0	1/1:10,6:16:4.19:471,4,0	1/1:5,5:10:9.03:282,9,0
chr10	42215463	.	C	CACACAT	4487	PASS	AB=0.983;AC=8;AF=0.143;AN=56;BaseQRankSum=10.352;DP=752;FS=1.951;HRun=0;HaplotypeScore=185.1657;InbreedingCoeff=0.3424;MQ=60.71;MQ0=4;MQRankSum=-10.958;QD=29.33;ReadPosRankSum=-1.965;VQSLOD=4.5822;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:59,0:59:3.01:0,3,46	0/0:13,0:13:36.12:0,36,917	0/0:34,0:28:82.70:0,83,1455	0/0:33,0:24:60.46:0,60,1436	0/0:23,0:23:69.24:0,69,1730	0/0:17,0:17:48.16:0,48,1184	0/0:24,0:24:69.15:0,69,1539	0/1:31,0:29:99:1066,0,169	0/0:19,0:19:48.59:0,49,1256	0/0:22,0:21:56.56:0,57,1340	0/0:18,0:18:51.14:0,51,1238	0/0:37,0:37:99:0,99,2431	0/0:16,0:16:48.15:0,48,1129	0/0:37,0:37:99:0,105,2352	0/0:25,0:25:42.14:0,42,1016	0/0:13,0:13:39.12:0,39,881	0/0:36,0:36:99:0,101,2402	0/0:37,0:37:74.57:0,75,1609	1/1:21,0:19:8.37:692,8,0	1/1:27,0:27:9.91:157,10,0	0/0:41,2:40:17.67:0,18,225	0/0:25,0:25:72.25:0,72,1838	0/0:19,0:19:57.20:0,57,1437	0/0:28,0:28:84.29:0,84,2070	0/0:21,0:20:33.11:0,33,843	0/1:44,1:44:38.72:2124,0,39	0/1:20,1:21:99:284,0,138	0/1:8,0:8:51.56:165,0,52
chr10	42215491	.	CGCACACACATGCACACAT	C	839.64	PASS	AB=0.629;AC=9;AF=0.161;AN=56;BaseQRankSum=4.632;DP=693;FS=5.828;HRun=0;HaplotypeScore=286.9375;InbreedingCoeff=0.5218;MQ=49.79;MQ0=15;MQRankSum=-1.301;QD=7.24;ReadPosRankSum=-0.607;VQSLOD=1.1316;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:8.77:0,9,221	0/0:13,0:13:21.07:0,21,917	0/0:27,0:7:6.96:0,7,144	0/0:31,0:12:19.40:0,19,385	0/0:19,0:19:36.12:0,36,1688	0/0:20,0:20:39.13:0,39,2233	0/0:31,0:31:63.19:0,63,2310	0/0:39,0:37:75.26:0,75,2039	0/0:23,0:23:57.20:0,57,2565	0/1:9,13:20:99:704,0,100	1/1:10,0:10:3.01:94,3,0	0/0:30,0:30:60.21:0,60,2516	0/0:17,0:17:39.13:0,39,1867	0/0:31,0:31:72.23:0,72,3725	1/1:9,20:29:0.78:2,1,0	0/0:15,0:15:42.14:0,42,2096	0/0:27,0:27:42.14:0,42,2198	1/1:15,20:35:2.29:145,2,0	0/0:17,0:13:21.95:0,22,568	0/0:19,0:19:5.63:0,6,128	0/0:54,0:53:43.32:0,43,1089	0/0:18,0:17:15.05:0,15,479	0/0:11,0:11:18.06:0,18,754	0/0:28,0:28:63.22:0,63,3216	1/1:6,14:20:0.89:2,1,0	0/0:34,0:33:32.06:0,32,1044	0/0:18,0:18:30.85:0,31,696	0/0:6,0:6:12.04:0,12,263
chr10	42215556	.	GCA	G	6327.54	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=11.982;DP=713;FS=13.994;HRun=0;HaplotypeScore=111.9785;InbreedingCoeff=0.9923;MQ=66.26;MQ0=15;MQRankSum=-5.560;QD=28.25;ReadPosRankSum=2.627;VQSLOD=5.9565;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,24:33:54.65:718,55,0	0/0:7,0:7:18.06:0,18,312	0/0:38,0:25:67.77:0,68,1110	0/0:45,0:31:86.55:0,87,1377	0/0:27,0:27:78.25:0,78,1322	0/0:25,0:25:69.24:0,69,1191	0/0:31,0:31:87.30:0,87,1507	1/1:4,30:33:83.63:1073,84,0	0/0:21,0:21:60.14:0,60,975	0/0:24,0:24:69.13:0,69,1086	0/0:24,0:24:60.20:0,60,1039	0/0:25,0:25:66.70:0,67,1123	0/0:15,0:15:42.14:0,42,721	0/0:39,0:39:99:0,102,1754	0/0:24,0:24:29.58:0,30,485	0/0:20,0:20:54.18:0,54,915	0/0:25,0:25:66.21:0,66,1115	0/0:21,0:20:39.13:0,39,671	1/1:8,15:18:11.55:559,12,0	1/1:1,21:22:60.20:799,60,0	1/1:5,54:58:99:1557,117,0	0/0:12,0:11:33.11:0,33,571	0/0:21,0:21:63.22:0,63,1090	0/0:25,0:25:69.24:0,69,1195	0/0:20,0:20:36.08:0,36,622	1/1:3,24:25:69.21:903,69,0	1/1:2,12:14:30.10:398,30,0	1/1:3,8:11:24.08:320,24,0
chr10	42217506	.	T	TTC	2101.33	PASS	AB=0.896;AC=41;AF=0.788;AN=52;BaseQRankSum=-0.629;DP=643;FS=6.270;HRun=0;HaplotypeScore=110.0631;InbreedingCoeff=-0.1608;MQ=70.28;MQ0=11;MQRankSum=1.068;QD=3.81;ReadPosRankSum=-1.426;VQSLOD=1.7205;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:20:1.53:0,2,4	1/1:9,4:14:9.20:133,9,0	./.	./.	1/1:36,0:36:2.89:22,3,0	1/1:17,4:21:14.99:177,15,0	0/1:12,3:15:52.94:76,0,53	1/1:38,0:38:2.97:20,3,0	1/1:27,0:27:11.72:105,12,0	1/1:16,3:19:12:153,12,0	0/1:18,0:18:0.03:0,0,0	1/1:12,5:19:9.02:133,9,0	0/1:16,9:26:1.20:203,0,1	1/1:17,0:17:11.96:109,12,0	1/1:21,4:30:6.01:70,6,0	1/1:24,0:23:2.15:24,2,0	1/1:10,1:12:3.47:26,3,0	1/1:9,0:8:3.01:37,3,0	0/1:16,3:18:16.75:131,0,17	1/1:24,5:29:5.68:88,6,0	0/1:24,1:26:52.77:64,0,53	0/1:27,4:31:47.90:109,0,48	0/1:24,0:24:14.40:51,0,14	0/1:17,0:17:22.97:95,0,23	1/1:26,0:25:6.02:84,6,0	1/1:12,3:16:16.17:134,16,0	0/1:22,5:27:29.66:158,0,30	1/1:8,0:6:3.94:25,4,0
chr10	42219318	.	G	GA	6838.20	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-15.769;DP=710;FS=0.320;HRun=4;HaplotypeScore=62.2390;InbreedingCoeff=0.9985;MQ=79.91;MQ0=0;MQRankSum=-1.543;QD=36.76;ReadPosRankSum=0.729;VQSLOD=4.9732;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,126,1417	0/0:9,0:9:24.07:0,24,272	0/0:16,0:16:44.32:0,44,467	0/0:21,0:21:48.08:0,48,515	0/0:30,0:30:78.21:0,78,875	0/0:27,0:27:72.20:0,72,816	0/0:25,0:25:75.20:0,75,841	1/1:2,21:23:63.20:847,63,0	0/0:21,0:21:60.17:0,60,681	0/0:23,0:23:66.18:0,66,742	0/0:17,0:17:39.11:0,39,442	0/0:34,0:34:96.27:0,96,1088	0/0:37,0:37:99:0,102,1137	0/0:30,0:30:84.24:0,84,952	0/0:20,0:20:60.16:0,60,671	0/0:36,0:36:99:0,99,1123	0/0:25,0:25:72.21:0,72,816	0/0:22,0:22:66.17:0,66,736	1/1:3,26:29:87.28:1176,87,0	1/1:1,30:31:87.29:1190,87,0	1/1:3,25:28:72.24:985,72,0	0/0:24,0:24:66.19:0,66,749	0/0:17,0:17:48.14:0,48,544	0/0:25,0:25:72.21:0,72,816	0/0:22,0:22:54.15:0,54,612	1/1:5,27:32:19.20:1040,19,0	1/1:2,24:26:69.23:944,69,0	1/1:0,17:17:48.16:657,48,0
chr10	42220347	.	C	CT	367.05	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-4.902;DP=636;FS=5.548;HRun=8;HaplotypeScore=70.8249;InbreedingCoeff=0.9900;MQ=78.86;MQ0=0;MQRankSum=-3.636;QD=20.39;ReadPosRankSum=1.017;VQSLOD=3.7758;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,15:18:17.67:457,18,0	0/0:11,0:11:30.01:0,30,275	0/0:16,0:16:32:0,32,271	0/0:16,0:16:36:0,36,322	0/0:28,0:28:84.03:0,84,764	0/0:22,0:22:54.02:0,54,494	0/0:15,0:15:42.02:0,42,384	0/0:37,0:37:78.01:0,78,711	0/0:18,0:18:42.01:0,42,384	0/0:19,0:19:51.02:0,51,464	0/0:23,0:23:57.01:0,57,517	0/0:17,0:17:42.02:0,42,384	0/0:28,0:28:72.01:0,72,654	0/0:13,0:13:39.01:0,39,352	0/0:20,0:20:60.01:0,60,540	0/0:20,0:20:51.02:0,51,467	0/0:29,0:29:75.03:0,75,686	0/0:17,0:17:48.02:0,48,439	0/0:36,0:36:90.01:0,90,820	0/0:36,0:36:99:0,102,929	0/0:23,0:23:60.02:0,60,549	0/0:27,0:27:62.93:0,63,561	0/0:31,0:31:81.03:0,81,741	0/0:19,0:19:48.02:0,48,439	0/0:28,0:28:72.03:0,72,659	0/0:20,0:20:51.03:0,51,467	0/0:36,0:36:96.04:0,96,879	0/0:13,0:13:39.02:0,39,357
chr10	42221570	.	C	CA	6375.42	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=17.967;DP=657;FS=5.740;HRun=0;HaplotypeScore=116.2443;InbreedingCoeff=0.9959;MQ=81.22;MQ0=0;MQRankSum=-16.762;QD=40.35;ReadPosRankSum=1.828;VQSLOD=4.4806;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,15:15:45.15:638,45,0	0/0:19,0:19:57.18:0,57,780	0/0:25,0:25:72.11:0,72,935	0/0:19,0:19:51.16:0,51,694	0/0:30,0:30:90.29:0,90,1239	0/0:26,0:26:78.26:0,78,1085	0/0:14,0:14:42.14:0,42,588	1/1:0,18:19:57.17:819,57,0	0/0:28,0:28:84.28:0,84,1173	0/0:29,0:29:87.29:0,87,1216	0/0:24,0:24:69.21:0,69,947	0/0:23,0:23:69.22:0,69,948	0/0:27,0:27:75.23:0,75,1028	0/0:23,0:23:66.22:0,66,922	0/0:28,0:28:78.25:0,78,1072	0/0:29,0:29:87.27:0,87,1184	0/0:31,0:31:90.30:0,90,1255	0/0:11,0:11:33.07:0,33,436	1/1:0,6:8:21.05:283,21,0	1/1:3,38:41:99:1626,112,0	1/1:1,4:5:15.03:193,15,0	0/0:39,0:39:99:0,114,1575	0/0:21,0:21:63.19:0,63,863	0/0:14,0:14:42.14:0,42,586	0/0:39,0:39:99:0,117,1635	1/1:0,34:36:99:1572,108,0	1/1:3,22:25:73.99:939,74,0	1/1:0,7:7:21.07:306,21,0
chr10	42221572	.	A	ACAGT	14329.09	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=19.489;DP=698;FS=13.383;HRun=0;HaplotypeScore=150.4209;InbreedingCoeff=0.9945;MQ=77.74;MQ0=0;MQRankSum=-19.535;QD=72.01;ReadPosRankSum=-0.417;VQSLOD=5.8008;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,15:19:48.14:1243,48,0	0/0:19,0:19:54.19:0,54,1132	0/0:24,0:25:75.19:0,75,1453	0/0:16,0:16:45.12:0,45,874	0/0:30,0:30:90.26:0,90,1770	0/0:25,0:25:75.26:0,75,1572	0/0:14,0:14:42.14:0,42,880	1/1:15,18:32:93.28:2520,93,0	0/0:27,0:27:81.28:0,81,1684	0/0:30,0:30:87.29:0,87,1783	0/0:26,0:26:75.24:0,75,1512	0/0:24,0:24:69.24:0,69,1447	0/0:26,0:26:72.21:0,72,1432	0/0:23,0:23:66.21:0,66,1344	0/0:27,0:27:75.26:0,75,1572	0/0:30,0:30:87.28:0,87,1785	0/0:30,0:30:90.28:0,90,1827	0/0:10,0:10:27.09:0,27,566	1/1:7,6:13:33.10:845,33,0	1/1:5,38:43:99:3119,123,0	1/1:1,4:5:12.04:324,12,0	0/0:39,0:39:99:0,117,2370	0/0:23,0:23:66.21:0,66,1344	0/0:15,0:15:45.11:0,45,864	0/0:40,0:40:99:0,120,2437	1/1:6,34:40:99:3178,114,0	1/1:12,22:34:93.20:2280,93,0	1/1:4,7:11:30.10:820,30,0
chr10	42221798	.	A	AAAC	5178.63	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=-5.883;DP=717;FS=2.384;HRun=0;HaplotypeScore=102.1182;InbreedingCoeff=0.9072;MQ=70.01;MQ0=3;MQRankSum=0.363;QD=28.77;ReadPosRankSum=1.572;VQSLOD=4.7060;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:46,0:46:80.61:940,81,0	0/0:5,0:5:9.03:0,9,126	0/1:27,0:20:3.49:3,0,105	0/0:32,0:31:42.98:0,43,578	0/0:33,0:33:72.24:0,72,1009	0/0:34,0:34:78.26:0,78,1091	0/0:19,0:19:42.14:0,42,590	0/0:44,0:44:72.22:0,72,954	0/0:35,0:35:75.25:0,75,1050	1/1:10,24:34:72.12:1327,72,0	1/1:5,11:16:39.13:742,39,0	0/0:23,0:23:42.13:0,42,575	0/0:32,0:32:84.24:0,84,1132	0/0:31,0:31:78.25:0,78,1072	1/1:8,28:36:78.27:1565,78,0	0/0:31,0:31:63.21:0,63,883	0/0:16,0:17:18.11:0,18,485	1/1:3,7:11:18.06:361,18,0	0/0:16,0:16:24.33:0,24,335	0/0:25,0:25:63.21:0,63,883	0/0:38,0:38:75.24:0,75,1038	0/0:22,0:22:51.17:0,51,714	0/0:11,0:11:18.05:0,18,233	0/0:25,0:25:48.15:0,48,657	1/1:2,6:9:12.04:241,12,0	0/0:26,0:26:66.20:0,66,889	0/0:30,0:29:75.21:0,75,1003	0/0:8,0:8:24.08:0,24,337
chr10	42221818	.	A	ACAACT	3215.74	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=7.448;DP=712;FS=3.459;HRun=0;HaplotypeScore=138.5842;InbreedingCoeff=0.1642;MQ=68.82;MQ0=3;MQRankSum=0.370;QD=20.61;ReadPosRankSum=5.195;VQSLOD=3.4588;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:4,41:50:79.75:2583,80,0	0/0:5,0:5:15.05:0,15,283	0/0:23,0:16:4.05:0,4,490	0/0:29,0:28:68.09:0,68,1033	0/0:29,0:29:87.30:0,87,1763	0/0:36,0:36:99:0,99,1983	0/0:18,0:18:54.18:0,54,1079	0/0:46,0:46:99:0,129,2304	0/0:30,0:30:87.30:0,87,1767	0/1:29,0:29:99:261,0,107	0/1:15,0:15:63.20:119,0,63	0/0:17,0:17:45.15:0,45,940	0/0:36,0:36:99:0,102,2047	0/0:31,0:31:93.32:0,93,1837	0/1:40,0:40:99:274,0,394	0/0:29,0:29:87.28:0,87,1655	0/0:19,0:19:50.96:0,51,963	0/1:11,0:11:65.60:75,0,66	0/0:20,0:20:54.48:0,54,1027	0/0:27,0:27:78.25:0,78,1549	0/0:36,0:36:99:0,105,2054	0/0:21,0:21:63.22:0,63,1269	0/0:10,0:10:27.08:0,27,482	0/0:22,0:22:63.22:0,63,1236	0/1:11,0:11:39.57:40,0,74	0/0:27,0:27:78.27:0,78,1569	0/0:34,0:33:99:0,102,1914	0/0:11,0:11:33.11:0,33,642
chr10	42222141	.	TA	T	600.87	PASS	AB=0.900;AC=11;AF=0.220;AN=50;BaseQRankSum=3.857;DP=274;FS=0.730;HRun=10;HaplotypeScore=35.9808;InbreedingCoeff=0.7157;MQ=81.70;MQ0=2;MQRankSum=0.711;QD=13.97;ReadPosRankSum=1.725;VQSLOD=2.9679;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:39.11:0,39,431	./.	0/0:21,0:10:9.78:0,10,58	0/0:33,0:13:7.94:0,8,77	0/0:3,0:11:25.73:0,26,147	0/0:14,0:14:34.27:0,34,353	0/0:3,0:3:9.02:0,9,100	0/0:26,0:26:56.95:0,57,589	0/0:0,0:1:2.84:0,3,14	1/1:0,7:7:21:182,21,0	1/1:0,5:5:11.99:104,12,0	0/0:3,0:3:9.02:0,9,100	0/0:3,0:3:9.02:0,9,100	0/0:5,0:5:15.03:0,15,159	1/1:0,2:2:6:52,6,0	0/0:1,0:5:11.52:0,12,69	0/0:27,0:27:72.19:0,72,796	1/1:1,6:7:12:104,12,0	0/0:13,0:13:33.08:0,33,358	0/0:2,0:2:6.02:0,6,66	./.	0/0:1,0:1:3.01:0,3,33	0/0:3,0:3:9.02:0,9,100	./.	1/1:0,13:13:35.99:313,36,0	0/1:8,1:9:1.99:2,0,208	0/0:10,0:10:23.96:0,24,222	0/0:33,0:33:96.18:0,96,1016
chr10	42222298	.	TC	T	585.17	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.623;DP=389;FS=4.958;HRun=5;HaplotypeScore=43.6937;InbreedingCoeff=0.9739;MQ=64.11;MQ0=5;MQRankSum=1.952;QD=21.67;ReadPosRankSum=1.252;VQSLOD=2.6055;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,25:27:60.17:680,60,0	0/0:7,0:7:21.07:0,21,287	0/0:14,0:9:20.07:0,20,285	0/0:14,0:12:27.09:0,27,355	0/0:18,0:18:54.17:0,54,721	0/0:12,0:12:36.12:0,36,492	0/0:13,0:13:39.13:0,39,530	0/0:33,0:31:81.24:0,81,1062	0/0:17,0:17:51.17:0,51,698	0/0:16,0:15:45.15:0,45,604	0/0:10,0:10:30.10:0,30,397	0/0:9,0:9:27.09:0,27,365	0/0:8,0:8:21.07:0,21,284	0/0:10,0:10:27.08:0,27,348	0/0:11,0:11:33.09:0,33,423	0/0:7,0:7:21.07:0,21,287	0/0:18,0:18:51.17:0,51,696	0/0:8,0:8:24.02:0,24,290	0/0:11,0:11:30.10:0,30,409	0/0:12,0:12:36.12:0,36,492	0/0:20,0:20:57.19:0,57,777	0/0:13,0:13:39.12:0,39,519	0/0:14,0:14:39.13:0,39,532	0/0:8,0:8:24.08:0,24,328	0/0:10,0:10:30.10:0,30,409	0/0:19,0:19:57.19:0,57,778	0/0:18,0:18:54.16:0,54,721	0/0:12,0:12:33.11:0,33,451
chr10	42223813	.	C	CGGTAAGAAT	880.49	PASS	AB=0.625;AC=1;AF=0.018;AN=56;BaseQRankSum=-1.520;DP=671;FS=0.000;HRun=0;HaplotypeScore=173.1410;InbreedingCoeff=-0.0245;MQ=57.12;MQ0=7;MQRankSum=-4.589;QD=58.70;ReadPosRankSum=-2.050;VQSLOD=2.9102;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:6,8:13:99:955,0,110	0/0:14,0:14:36.12:0,36,1045	0/0:20,0:14:3.25:0,3,608	0/0:18,0:11:18.05:0,18,401	0/0:42,0:42:99:0,120,3392	0/0:25,0:25:57.20:0,57,1600	0/0:18,0:18:48.10:0,48,1246	0/0:32,0:31:72.24:0,72,1970	0/0:26,0:26:66.21:0,66,1843	0/0:33,0:33:90.31:0,90,2610	0/0:37,0:37:99:0,102,2873	0/0:17,0:17:42.14:0,42,1201	0/0:22,0:22:57.20:0,57,1655	0/0:24,0:24:63.22:0,63,1829	0/0:26,0:26:66.23:0,66,1880	0/0:21,0:21:57.14:0,57,1527	0/0:21,0:20:48.16:0,48,1347	0/0:19,0:19:51.18:0,51,1481	0/0:25,0:20:39.13:0,39,1087	0/0:27,0:27:72.25:0,72,2035	0/0:22,0:21:60.21:0,60,1724	0/0:21,0:21:45.15:0,45,1245	0/0:22,0:22:42.14:0,42,1219	0/0:16,0:16:45.15:0,45,1266	0/0:28,0:28:75.21:0,75,2041	0/0:25,0:25:60.21:0,60,1742	0/0:41,0:37:99:0,99,2740	0/0:14,0:13:39.13:0,39,1132
chr10	42224114	.	G	GT	4571.89	PASS	AB=0.575;AC=13;AF=0.250;AN=52;BaseQRankSum=-13.418;DP=608;FS=8.475;HRun=6;HaplotypeScore=49.9127;InbreedingCoeff=0.8925;MQ=54.44;MQ0=22;MQRankSum=-2.675;QD=27.21;ReadPosRankSum=-0.351;VQSLOD=4.5963;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:48.10:0,48,489	0/0:9,0:9:24.03:0,24,236	./.	./.	0/0:34,0:33:99:0,99,1010	0/0:26,0:26:69.15:0,69,703	0/0:15,0:15:42.09:0,42,428	1/1:3,25:25:63.11:739,63,0	0/0:14,0:14:39.08:0,39,392	0/0:34,0:34:96.16:0,96,964	0/0:30,0:30:84.10:0,84,825	0/0:7,0:7:15.03:0,15,153	0/0:27,0:27:75.16:0,75,758	0/0:23,0:22:57.11:0,57,574	0/0:19,0:19:57.12:0,57,575	0/0:27,0:26:72.12:0,72,719	0/0:23,0:22:54.12:0,54,550	0/0:25,0:23:66.15:0,66,673	1/1:8,18:17:48.11:585,48,0	1/1:2,30:32:69.22:868,69,0	1/1:0,7:7:18.06:226,18,0	0/0:21,0:21:63.10:0,63,623	0/0:21,0:21:63.11:0,63,629	0/0:16,0:16:45.05:0,45,443	0/0:20,0:20:54.11:0,54,545	0/1:6,17:23:31.62:569,0,32	1/1:3,31:34:81.26:1018,81,0	1/1:3,15:18:45.14:566,45,0
chr10	42224710	.	A	ATT	1016.79	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-1.912;DP=605;FS=1.602;HRun=7;HaplotypeScore=68.1549;InbreedingCoeff=0.9172;MQ=61.72;MQ0=8;MQRankSum=-0.908;QD=39.11;ReadPosRankSum=0.380;VQSLOD=3.3010;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,25:26:71.69:1112,72,0	0/0:7,0:7:21.06:0,21,245	0/0:30,0:16:32.55:0,33,419	0/0:26,0:12:7.14:0,7,260	0/0:26,0:26:78.23:0,78,908	0/0:30,0:30:81.21:0,81,934	0/0:19,0:19:54.10:0,54,594	0/0:28,0:26:69.18:0,69,794	0/0:21,0:21:60.16:0,60,689	0/0:21,0:21:60.14:0,60,685	0/0:18,0:18:48.13:0,48,559	0/0:16,0:16:42.12:0,42,489	0/0:21,0:21:63.17:0,63,723	0/0:18,0:18:48.13:0,48,559	0/0:21,0:21:57.15:0,57,654	0/0:12,0:12:33.09:0,33,384	0/0:27,0:27:72.19:0,72,827	0/0:15,0:15:27.07:0,27,315	0/0:19,0:19:45.10:0,45,507	0/0:26,0:26:75.22:0,75,874	0/0:24,0:24:63.14:0,63,711	0/0:20,0:20:54.14:0,54,618	0/0:26,0:26:63.13:0,63,720	0/0:23,0:22:57.12:0,57,640	0/0:20,0:20:51.12:0,51,573	0/0:18,0:17:51.14:0,51,587	0/0:25,0:24:66.19:0,66,769	0/0:21,0:21:42.05:0,42,461
chr10	42225958	.	A	ATCT	12426.90	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=13.755;DP=755;FS=0.303;HRun=0;HaplotypeScore=117.5458;InbreedingCoeff=0.9995;MQ=58.91;MQ0=5;MQRankSum=-6.051;QD=50.52;ReadPosRankSum=-2.110;VQSLOD=6.3896;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,26:32:57.73:1446,58,0	0/0:13,0:13:36.11:0,36,564	0/0:23,0:19:48.09:0,48,675	0/0:20,0:19:54.17:0,54,823	0/0:24,0:24:69.18:0,69,1051	0/0:32,0:32:90.22:0,90,1365	0/0:18,0:18:51.16:0,51,809	1/1:8,26:33:90.20:1662,90,0	0/0:25,0:25:66.19:0,66,1028	0/0:35,0:35:99:0,102,1558	0/0:21,0:21:57.18:0,57,897	0/0:18,0:18:51.12:0,51,803	0/0:26,0:26:69.24:0,69,1125	0/0:33,0:33:96.33:0,96,1561	0/0:44,0:43:99:0,117,1882	0/0:21,0:21:51.17:0,51,828	0/0:25,0:25:60.20:0,60,977	0/0:22,0:22:24.08:0,24,585	1/1:3,14:16:28.05:885,28,0	1/1:3,27:30:57.16:1400,57,0	1/1:5,28:32:78.27:1742,78,0	0/0:26,0:26:66.21:0,66,1052	0/0:39,0:39:99:0,108,1659	0/0:20,0:20:51.17:0,51,832	0/0:23,0:23:63.20:0,63,1005	1/1:3,32:35:33.33:2032,33,0	1/1:5,34:38:82.36:2189,82,0	1/1:4,17:20:48.16:1072,48,0
chr10	42231392	.	CAG	C	488.27	PASS	AB=0.926;AC=28;AF=0.538;AN=52;BaseQRankSum=2.037;DP=587;FS=9.758;HRun=0;HaplotypeScore=77.9271;InbreedingCoeff=0.1876;MQ=57.58;MQ0=21;MQRankSum=0.442;QD=1.32;ReadPosRankSum=-1.071;VQSLOD=0.5180;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:29:5.54:26,6,0	0/0:11,0:10:2.68:0,3,11	./.	./.	0/0:19,0:19:3.86:0,4,60	1/1:23,0:22:8.15:46,8,0	1/1:19,0:19:9.96:94,10,0	0/0:29,0:28:1.25:0,1,3	0/1:13,0:13:29.52:30,0,55	0/0:21,0:20:11.96:0,12,114	0/0:16,0:16:2.99:0,3,24	0/0:12,0:11:6:0,6,53	1/1:18,1:19:6.81:52,7,0	0/0:20,0:20:10.24:0,10,79	0/0:14,0:14:9.47:0,9,108	1/1:12,0:22:11.26:56,11,0	0/1:29,0:29:29.55:30,0,206	0/1:19,0:19:8.81:9,0,95	0/1:22,0:22:5.08:5,0,21	1/1:19,0:21:5.70:38,6,0	0/1:8,0:8:0.02:0,0,0	1/1:17,0:17:5.81:33,6,0	1/1:23,0:22:1.34:27,1,0	0/1:11,15:26:8.94:84,0,9	1/1:20,0:20:7.95:36,8,0	0/1:25,0:25:11.41:11,0,45	0/1:17,7:24:14.69:55,0,15	1/1:11,0:10:2.80:13,3,0
chr10	42232840	.	GCTCT	G	478.10	PASS	AB=0.972;AC=14;AF=0.269;AN=52;BaseQRankSum=5.350;DP=614;FS=7.169;HRun=0;HaplotypeScore=124.5964;InbreedingCoeff=0.3729;MQ=69.39;MQ0=18;MQRankSum=-3.020;QD=2.33;ReadPosRankSum=0.063;VQSLOD=1.5939;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:36,0:35:2.87:28,3,0	0/0:7,0:7:5.93:0,6,41	0/0:43,0:18:3.01:0,3,40	0/0:37,0:25:10.48:0,10,81	0/0:21,0:21:2.99:0,3,24	0/0:26,0:23:34.09:0,34,449	0/0:16,0:20:29.37:0,29,363	./.	0/1:20,0:18:18.89:20,0,19	0/0:6,0:6:6.49:0,6,121	0/0:19,0:18:13.36:0,13,172	1/1:7,11:18:6.01:75,6,0	0/1:21,0:24:20.22:20,0,468	1/1:9,13:24:8.17:248,8,0	0/0:25,0:24:3:0,3,54	0/1:22,0:22:12.17:66,0,12	0/0:10,0:20:12.04:0,12,243	0/0:10,0:10:13.56:0,14,192	0/0:23,0:23:2.13:0,2,5	0/0:15,0:15:2.82:0,3,20	0/1:20,0:20:0:0,0,0	0/0:20,0:20:30.31:0,30,525	0/0:20,0:18:15.41:0,15,189	0/0:17,0:19:6.27:0,6,290	0/0:28,0:25:6.48:0,6,95	./.	1/1:27,0:27:15.02:139,15,0	1/1:13,0:11:3:28,3,0
chr10	42232847	.	CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTT	C	1374.36	PASS	AB=0.993;AC=7;AF=0.125;AN=56;BaseQRankSum=3.771;DP=612;FS=14.110;HRun=0;HaplotypeScore=360.4203;InbreedingCoeff=0.1600;MQ=61.74;MQ0=22;MQRankSum=-1.224;QD=8.92;ReadPosRankSum=-0.868;VQSLOD=0.6582;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:17,21:37:2.27:244,2,0	0/0:9,0:9:12.03:0,12,871	0/0:36,0:11:3.01:0,3,76	0/0:33,0:21:7.70:0,8,429	0/0:23,0:23:6:0,6,105	0/0:28,0:25:59.79:0,60,4919	0/0:21,0:21:49.02:0,49,3270	0/1:34,0:34:99:141,0,171	0/0:19,0:17:27.09:0,27,1787	0/0:9,0:9:16.30:0,16,1838	0/0:18,0:17:20.59:0,21,1382	0/0:20,0:19:18.05:0,18,1116	0/0:23,0:23:39.13:0,39,3570	0/0:26,0:26:33.78:0,34,2650	0/0:24,0:23:40.89:0,41,1998	0/0:21,0:20:29.12:0,29,1513	0/0:17,0:17:12.04:0,12,1701	0/0:11,0:11:30.10:0,30,2802	0/0:20,0:19:15.35:0,15,141	0/1:17,0:17:0.01:20,0,0	0/1:24,0:22:14.35:14,0,36	0/0:20,0:20:35.45:0,35,3654	0/0:23,0:21:25.01:0,25,2214	0/0:21,0:20:24.08:0,24,2773	0/0:26,0:23:39.05:0,39,1860	0/0:10,0:10:11.97:0,12,130	0/1:26,1:27:60:901,0,60	0/1:14,0:12:33.08:179,0,33
chr10	42232849	.	CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTT	C	1829.56	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=5.415;DP=603;FS=24.067;HRun=0;HaplotypeScore=333.7983;InbreedingCoeff=0.6978;MQ=60.96;MQ0=22;MQRankSum=-0.987;QD=11.36;ReadPosRankSum=-0.618;VQSLOD=0.8607;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:37,0:36:2.35:209,2,0	0/0:9,0:9:12.03:0,12,796	0/0:35,0:10:3.01:0,3,54	0/0:32,0:20:8.42:0,8,258	0/0:23,0:23:3.01:0,3,55	0/0:29,0:26:65.78:0,66,5020	0/0:21,0:21:40.02:0,40,2888	1/1:23,9:32:24.48:281,24,0	0/0:19,0:17:27.09:0,27,1561	0/0:8,0:8:16.30:0,16,1716	0/0:18,0:17:20.96:0,21,1236	0/0:20,0:19:12.04:0,12,945	0/0:22,0:22:39.07:0,39,3246	0/0:27,0:27:33.37:0,33,2677	0/0:24,0:23:40.48:0,40,2064	0/0:21,0:20:25.80:0,26,1277	0/0:15,0:15:12.04:0,12,1597	0/0:11,0:11:30.10:0,30,2624	0/0:18,0:17:4.62:0,5,12	1/1:11,6:17:0.68:66,1,0	1/1:11,12:21:3.85:22,4,0	0/0:19,0:19:35.85:0,36,3371	0/0:23,0:21:22.01:0,22,2010	0/0:21,0:20:24.07:0,24,2550	0/0:27,0:24:39.04:0,39,1875	1/1:10,0:10:3:28,3,0	1/1:14,14:28:13.39:1151,13,0	1/1:7,7:12:3.01:231,3,0
chr10	42232869	.	CTCTCTCTCTT	C	1797.51	PASS	AB=0.992;AC=26;AF=0.500;AN=52;BaseQRankSum=4.333;DP=525;FS=1.069;HRun=0;HaplotypeScore=143.2503;InbreedingCoeff=0.3825;MQ=51.13;MQ0=24;MQRankSum=0.360;QD=5.99;ReadPosRankSum=-1.900;VQSLOD=2.5008;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:21:3.01:71,3,0	0/0:7,0:7:12.01:0,12,228	./.	0/0:28,0:9:5.98:0,6,48	./.	0/0:28,0:26:32.72:0,33,1115	0/0:22,0:22:22.26:0,22,763	1/1:15,0:15:25.48:197,25,0	1/1:19,2:19:38.83:383,39,0	0/0:13,0:13:35.75:0,36,654	0/1:20,0:19:22.59:23,0,375	0/1:23,0:22:0.20:0,0,188	0/0:18,0:18:36.03:0,36,961	0/0:25,0:25:33.64:0,34,440	0/1:25,0:24:42.91:43,0,416	1/1:17,3:19:30.50:424,30,0	0/1:17,0:17:9.13:9,0,592	0/1:13,0:14:12.52:13,0,605	1/1:12,0:9:13.73:99,14,0	0/1:12,0:12:0.24:0,0,0	1/1:16,0:14:2.97:20,3,0	0/0:24,0:24:13.84:0,14,1008	0/1:19,0:17:10.53:11,0,544	0/0:21,0:20:31.92:0,32,849	0/1:23,0:20:95.48:95,0,323	1/1:13,0:13:23.44:160,23,0	1/1:18,0:18:15.05:356,15,0	1/1:9,0:8:3.01:71,3,0
chr10	42232877	.	CTT	C	1551.74	PASS	AB=1.000;AC=28;AF=0.538;AN=52;BaseQRankSum=5.805;DP=482;FS=0.945;HRun=3;HaplotypeScore=88.2483;InbreedingCoeff=0.1157;MQ=52.46;MQ0=21;MQRankSum=-0.143;QD=4.82;ReadPosRankSum=-1.101;VQSLOD=-0.7031;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:21:2.88:15,3,0	0/1:7,0:7:9.02:9,0,76	0/0:19,0:4:8.96:0,9,76	0/0:22,0:4:11.82:0,12,83	./.	0/1:25,0:24:22.72:23,0,320	0/0:17,0:17:4.76:0,5,258	1/1:9,0:9:25.74:199,26,0	1/1:22,0:21:44.72:344,45,0	0/0:15,0:15:24.09:0,24,296	0/1:20,0:19:17.07:17,0,206	0/0:21,0:20:3.74:0,4,123	0/0:14,1:15:27.51:0,28,275	0/1:25,0:25:43.77:44,0,113	0/1:24,0:24:66.08:66,0,270	1/1:17,0:16:29.49:220,29,0	0/1:18,0:18:6.14:6,0,197	0/1:14,0:14:54.96:55,0,121	1/1:2,9:9:26.85:205,27,0	./.	1/1:14,0:12:2.97:20,3,0	0/0:25,0:25:8.57:0,9,446	0/1:17,0:16:50.19:50,0,192	0/1:21,0:20:9.91:10,0,260	0/1:19,0:16:92.49:92,0,204	1/1:0,13:13:35.65:257,36,0	1/1:15,0:15:14.40:77,14,0	1/1:8,0:7:2.88:15,3,0
chr10	42234032	.	GACAACA	G	4855.65	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=12.540;DP=660;FS=14.333;HRun=0;HaplotypeScore=132.0112;InbreedingCoeff=0.9714;MQ=65.71;MQ0=2;MQRankSum=-9.824;QD=31.95;ReadPosRankSum=-1.519;VQSLOD=3.7589;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,25:35:48.16:991,48,0	0/0:19,0:19:54.19:0,54,1786	0/0:25,0:18:22.63:0,23,596	0/0:23,0:20:30.10:0,30,875	0/0:35,0:36:81.21:0,81,2473	0/0:32,0:33:78.21:0,78,2428	0/0:27,0:28:63.13:0,63,1842	1/1:8,8:16:23.81:361,24,0	0/0:22,0:22:60.14:0,60,1852	0/0:20,0:21:51.11:0,51,1414	0/0:27,0:27:54.14:0,54,1531	0/0:18,0:18:42.09:0,42,1176	0/0:28,0:28:54.19:0,54,1786	0/0:21,0:21:54.19:0,54,1763	0/0:26,0:27:63.07:0,63,1712	0/0:24,0:25:60.14:0,60,1792	0/0:25,0:25:60.21:0,60,1948	0/0:25,0:24:54.14:0,54,1575	1/1:5,11:16:33.09:636,33,0	1/1:1,25:27:54.05:1089,54,0	1/1:5,9:14:6.02:127,6,0	0/0:23,0:23:57.18:0,57,1801	0/0:23,0:23:60.12:0,60,1722	0/0:33,0:33:79.51:0,80,2583	0/0:25,0:25:51.18:0,51,1639	1/1:5,11:16:33.07:636,33,0	1/1:5,17:22:39.13:825,39,0	1/1:0,5:5:9.03:190,9,0
chr10	42234247	.	TTC	T	126.13	PASS	AB=0.983;AC=16;AF=0.333;AN=48;BaseQRankSum=2.258;DP=586;FS=4.461;HRun=0;HaplotypeScore=116.3205;InbreedingCoeff=0.2512;MQ=52.43;MQ0=27;MQRankSum=0.036;QD=0.55;ReadPosRankSum=-1.932;VQSLOD=1.7859;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:6.36:0,6,72	./.	./.	./.	0/0:23,1:23:1.72:0,2,4	0/1:28,0:28:1.12:1,0,49	0/0:11,0:10:1.25:0,1,5	0/1:27,0:27:2.66:3,0,31	1/1:12,0:12:0.98:26,1,0	0/1:27,0:26:3.99:4,0,63	./.	0/1:24,2:25:6.77:52,0,7	1/1:20,0:20:12.34:48,12,0	1/1:22,2:25:2.11:56,2,0	0/0:19,0:19:11.12:0,11,72	0/0:19,0:18:0.89:0,1,2	0/0:22,0:22:16.83:0,17,162	0/0:14,0:14:7.81:0,8,36	0/0:12,0:10:0:0,0,0	0/0:23,0:21:0:0,0,0	0/0:19,0:17:1.72:0,2,4	0/1:9,0:9:0:0,0,0	0/1:14,0:14:0.05:0,0,0	0/1:24,0:23:8.56:38,0,9	0/0:20,0:19:7.44:0,7,33	1/1:11,0:11:1.99:11,2,0	0/0:17,0:17:6.57:0,7,37	0/1:6,0:5:0:0,0,0
chr10	42234289	.	CTG	C	445.01	PASS	AB=0.987;AC=23;AF=0.411;AN=56;BaseQRankSum=2.590;DP=552;FS=66.590;HRun=0;HaplotypeScore=131.6602;InbreedingCoeff=-0.3534;MQ=43.14;MQ0=50;MQRankSum=0.507;QD=0.99;ReadPosRankSum=0.155;VQSLOD=-0.1835;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:23:8.96:0,9,103	0/0:2,0:1:2.97:0,3,20	1/1:37,0:2:0.47:1,0,0	0/1:76,0:8:0.42:0,0,25	0/1:23,0:23:6.66:28,0,7	0/1:18,1:19:35.17:35,0,167	0/1:18,0:17:4.03:4,0,187	0/0:23,0:21:45.93:0,46,216	0/1:16,0:15:2.33:19,0,2	0/1:16,0:14:18.94:19,0,172	0/0:13,1:12:22.99:0,23,174	0/1:20,0:19:69.26:69,0,108	0/1:26,0:25:82.71:83,0,167	0/1:22,1:23:28.86:29,0,144	0/0:14,1:15:13.84:0,14,159	0/1:20,0:19:1.35:35,0,1	0/1:19,0:18:7.77:8,0,170	0/1:11,1:12:13.48:13,0,114	0/0:9,0:5:0.58:0,1,22	0/1:12,0:12:11.14:18,0,11	0/1:15,0:12:8.51:38,0,9	0/0:14,0:13:14.53:0,15,115	0/1:18,0:17:8.51:9,0,133	0/1:25,1:24:87.27:87,0,142	0/1:14,0:13:26.46:26,0,56	0/1:13,0:13:8.56:9,0,91	0/1:22,1:23:38.87:39,0,164	1/1:5,0:3:2.98:21,3,0
chr10	42234304	.	CCTCT	C	2214.53	PASS	AB=0.833;AC=13;AF=0.241;AN=54;BaseQRankSum=3.185;DP=594;FS=10.233;HRun=0;HaplotypeScore=144.8846;InbreedingCoeff=0.8487;MQ=47.74;MQ0=45;MQRankSum=-5.620;QD=19.09;ReadPosRankSum=-2.085;VQSLOD=2.4460;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:23,1:23:7.02:306,7,0	0/0:5,0:4:12.02:0,12,182	0/0:45,0:4:4.83:0,5,51	0/0:86,0:12:11.63:0,12,132	0/0:23,0:23:35.46:0,35,500	0/0:20,0:20:34.33:0,34,698	0/0:21,0:21:47.94:0,48,870	1/1:9,10:17:27.08:412,27,0	0/0:16,0:15:28.95:0,29,431	0/0:14,0:13:35.29:0,35,539	0/0:17,0:15:36.05:0,36,687	0/0:20,0:20:38.15:0,38,620	0/0:30,0:29:58.58:0,59,1043	0/0:25,0:25:26.80:0,27,585	0/0:18,0:18:42.10:0,42,690	0/0:21,0:20:30.74:0,31,464	0/0:16,0:15:28.32:0,28,463	0/0:12,0:12:30.01:0,30,512	1/1:8,2:7:11.97:153,12,0	1/1:3,9:12:13.21:147,13,0	0/1:12,3:14:7.83:126,0,8	0/0:21,0:20:28.06:0,28,556	0/0:20,0:18:35.95:0,36,658	0/0:24,0:23:38.80:0,39,740	0/0:19,0:18:33.11:0,33,560	1/1:6,7:13:36.10:565,36,0	1/1:18,5:23:50.87:686,51,0	./.
chr10	42234361	.	C	CACAT	5153.28	PASS	AB=0.809;AC=16;AF=0.286;AN=56;BaseQRankSum=-10.079;DP=647;FS=7.678;HRun=0;HaplotypeScore=153.5317;InbreedingCoeff=0.7564;MQ=55.22;MQ0=4;MQRankSum=1.867;QD=22.02;ReadPosRankSum=1.615;VQSLOD=4.3132;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:18:11.90:0,12,103	0/0:14,0:14:30.03:0,30,360	0/0:48,0:20:8.99:0,9,103	0/0:38,0:21:2.99:0,3,23	0/0:15,0:26:39.79:0,40,336	1/1:10,15:26:27.09:642,27,0	1/1:12,14:26:27.09:642,27,0	0/0:12,0:20:17.77:0,18,136	0/0:9,0:14:15.48:0,15,138	0/0:35,0:36:87.21:0,87,1276	0/0:18,0:18:30.07:0,30,415	1/1:8,14:24:30.10:697,30,0	1/1:18,15:34:24.08:561,24,0	1/1:13,15:29:26.59:575,27,0	0/0:23,0:23:36.11:0,36,543	0/0:7,0:15:24.27:0,24,219	0/1:12,0:12:6.90:7,0,174	0/0:22,0:22:48.16:0,48,748	0/0:13,0:16:9.01:0,9,84	0/0:7,0:13:21.38:0,21,177	0/0:11,0:17:18.25:0,18,165	1/1:12,22:33:44.43:1053,44,0	0/1:8,13:21:23.25:475,0,23	1/1:10,16:28:21.07:500,21,0	0/0:25,0:25:57.16:0,57,850	0/0:8,0:19:27.92:0,28,270	0/0:16,0:25:32.06:0,32,299	0/0:3,0:4:3:0,3,28
chr10	42234417	.	C	CA	984.47	PASS	AB=0.779;AC=11;AF=0.196;AN=56;BaseQRankSum=8.270;DP=637;FS=5.999;HRun=1;HaplotypeScore=126.7237;InbreedingCoeff=-0.2439;MQ=55.97;MQ0=8;MQRankSum=-7.416;QD=4.78;ReadPosRankSum=-1.282;VQSLOD=-0.0943;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:9,3:12:30.90:35,0,31	0/0:20,0:20:57.19:0,57,793	0/0:36,0:17:47.94:0,48,626	0/0:36,0:25:53.81:0,54,648	0/1:18,3:24:58.15:58,0,343	0/0:26,0:26:63.19:0,63,863	0/0:28,0:28:75.23:0,75,1025	0/1:16,6:20:99:191,0,486	0/1:11,7:20:99:115,0,117	0/0:37,1:38:60.04:0,60,1404	0/0:23,0:23:69.23:0,69,962	0/0:18,0:18:48.16:0,48,667	0/0:28,0:28:63.21:0,63,872	0/0:15,0:15:33.11:0,33,458	0/0:23,0:23:60.19:0,60,824	0/1:12,7:21:99:248,0,145	0/0:19,0:19:54.18:0,54,751	0/0:26,0:26:78.26:0,78,1073	0/1:14,2:14:99:135,0,299	0/1:14,5:18:19.96:20,0,152	0/1:15,2:11:29.69:30,0,192	0/0:26,0:26:78.26:0,78,1088	0/0:20,0:20:55.74:0,56,759	0/0:23,1:24:54.16:0,54,735	0/0:25,0:25:71.95:0,72,986	0/1:21,2:22:84.13:84,0,602	0/1:17,8:24:99:177,0,324	0/1:1,1:3:35.93:40,0,36
chr10	42236764	.	A	ATG	8374.42	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-7.469;DP=489;FS=12.946;HRun=0;HaplotypeScore=62.2537;InbreedingCoeff=0.9376;MQ=72.07;MQ0=2;MQRankSum=0.375;QD=35.04;ReadPosRankSum=0.218;VQSLOD=6.0463;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,28:37:1.78:1076,2,0	0/0:6,0:6:18.06:0,18,229	0/0:12,0:12:24.07:0,24,289	0/0:12,0:10:14.55:0,15,166	1/1:2,24:25:60.21:1002,60,0	0/0:18,0:18:45.13:0,45,555	0/0:11,0:11:21.03:0,21,239	1/1:4,25:30:78.23:1247,78,0	1/1:5,16:21:3.94:615,4,0	0/0:24,0:24:51.16:0,51,640	0/0:24,0:24:63.19:0,63,788	0/0:9,0:9:24.08:0,24,306	0/0:21,0:21:54.17:0,54,688	0/0:10,0:10:30.08:0,30,369	0/0:13,0:13:39.11:0,39,483	1/1:2,12:16:27.09:452,27,0	0/0:19,0:19:48.15:0,48,611	0/0:16,0:16:42.13:0,42,534	1/1:7,14:21:42.14:693,42,0	1/1:6,23:29:63.21:1039,63,0	1/1:1,5:6:12.04:201,12,0	0/0:9,0:9:27.09:0,27,344	0/0:16,0:16:42.13:0,42,534	0/0:13,0:13:36.04:0,36,423	0/0:17,0:17:42.13:0,42,532	1/1:1,18:18:51.17:854,51,0	1/1:4,20:25:51.17:846,51,0	1/1:1,7:8:21.07:351,21,0
chr10	42238190	.	T	TTC	2332.33	PASS	AB=1.000;AC=42;AF=0.750;AN=56;BaseQRankSum=2.953;DP=609;FS=5.017;HRun=0;HaplotypeScore=117.8399;InbreedingCoeff=0.3535;MQ=74.62;MQ0=18;MQRankSum=1.177;QD=4.71;ReadPosRankSum=0.276;VQSLOD=2.8108;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:18:9.45:76,9,0	0/0:8,0:8:5.99:0,6,48	1/1:39,0:21:0.41:1,0,0	0/0:49,0:30:2.26:0,2,10	1/1:30,0:29:14.98:125,15,0	1/1:23,0:23:20.71:152,21,0	1/1:20,0:20:18.40:146,18,0	1/1:52,0:51:26.53:169,27,0	1/1:16,0:16:8.99:76,9,0	0/1:14,0:13:16.20:55,0,16	0/1:14,0:14:11.71:37,0,12	1/1:18,0:18:14.74:108,15,0	1/1:11,0:19:5.99:50,6,0	1/1:16,0:16:8.98:72,9,0	1/1:15,0:15:14.99:126,15,0	1/1:24,0:24:16.28:135,16,0	0/0:23,0:21:5.11:0,5,140	0/1:12,0:12:65.24:67,0,65	1/1:20,0:20:9.80:69,10,0	1/1:26,0:25:14.23:117,14,0	1/1:16,0:16:14.99:129,15,0	1/1:21,0:21:14.95:122,15,0	0/0:13,10:23:2.20:0,2,7	1/1:25,0:23:1.31:151,1,0	0/1:14,0:14:46.83:73,0,47	1/1:25,0:25:9.23:213,9,0	1/1:18,0:18:28.95:220,29,0	0/0:11,0:8:5.96:0,6,44
chr10	42238223	.	TCACACACA	T	1797.43	PASS	AB=0.985;AC=10;AF=0.200;AN=50;BaseQRankSum=-1.057;DP=499;FS=37.780;HRun=0;HaplotypeScore=147.7324;InbreedingCoeff=0.0308;MQ=47.43;MQ0=20;MQRankSum=0.368;QD=8.85;ReadPosRankSum=-4.317;VQSLOD=-0.4455;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:21,1:21:13.73:278,0,14	0/0:6,0:6:9.03:0,9,309	./.	./.	0/1:27,0:26:62.08:139,0,62	0/0:20,0:19:21.54:0,22,613	0/0:22,0:21:11.96:0,12,315	0/0:22,0:20:0:0,0,0	0/0:12,0:12:2.78:0,3,13	0/0:11,0:10:14.72:0,15,301	0/0:17,0:16:8.79:0,9,185	0/0:17,0:17:24.08:0,24,700	0/0:15,0:15:11.99:0,12,299	0/0:15,0:15:9.03:0,9,272	0/1:28,0:27:2.20:2,0,350	0/1:21,0:21:28.18:28,0,156	0/0:20,0:18:21.04:0,21,534	0/0:14,0:14:18.06:0,18,347	1/1:13,4:17:11.86:269,12,0	0/1:23,0:23:57.15:579,0,57	0/1:20,0:17:4.49:177,0,4	0/0:19,0:19:3.01:0,3,51	0/0:23,0:23:24.82:0,25,756	0/0:26,0:23:32.92:0,33,785	0/0:19,0:19:20.73:0,21,373	0/1:21,0:23:99:192,0,112	0/1:21,0:21:19.83:268,0,20	./.
chr10	42241056	.	GC	G	3026.12	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=2.983;DP=810;FS=2.623;HRun=1;HaplotypeScore=101.8490;InbreedingCoeff=0.9943;MQ=85.73;MQ0=0;MQRankSum=-2.065;QD=35.60;ReadPosRankSum=2.212;VQSLOD=3.7880;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,150,2321	0/0:11,0:11:33.10:0,33,504	0/0:29,0:29:86.86:0,87,1309	0/0:24,0:24:69.21:0,69,1069	1/1:0,25:25:72.24:998,72,0	0/0:31,0:31:93.32:0,93,1478	0/0:39,0:39:99:0,117,1862	0/0:27,0:27:81.26:0,81,1250	1/1:0,29:29:81.27:1128,81,0	0/0:48,0:47:99:0,144,2280	0/0:21,0:21:60.19:0,60,933	0/0:32,0:32:96.31:0,96,1508	0/0:27,0:27:81.26:0,81,1269	0/0:36,0:36:99:0,108,1701	0/0:40,0:40:99:0,120,1887	1/1:0,31:31:75.25:1043,75,0	0/0:38,0:38:99:0,114,1812	0/0:21,0:21:63.21:0,63,1006	0/0:27,0:27:81.27:0,81,1262	0/0:24,0:24:72.25:0,72,1148	0/0:38,0:38:99:0,111,1771	0/0:26,0:26:78.27:0,78,1241	0/0:30,0:30:90.29:0,90,1398	0/0:30,0:30:90.29:0,90,1412	0/0:27,0:27:81.26:0,81,1271	0/0:21,0:21:63.21:0,63,1007	0/0:23,0:23:69.12:0,69,937	0/0:5,0:5:15.05:0,15,239
chr10	42241574	.	G	GAA	5278.20	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-2.584;DP=688;FS=10.647;HRun=9;HaplotypeScore=88.0702;InbreedingCoeff=0.9940;MQ=69.17;MQ0=1;MQRankSum=-2.633;QD=26.39;ReadPosRankSum=-2.993;VQSLOD=3.0777;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,0:40:78.08:704,78,0	0/0:12,0:12:30.06:0,30,319	0/0:18,0:19:11.85:0,12,273	0/0:14,0:15:29.03:0,29,257	0/0:39,0:39:99:0,102,1061	0/0:17,0:17:51.09:0,51,526	0/0:19,0:19:42.08:0,42,447	1/1:6,0:29:58.70:236,59,0	0/0:25,0:25:57.09:0,57,597	0/0:35,0:35:78.12:0,78,812	0/0:19,0:19:51.12:0,51,543	0/0:33,0:33:78.14:0,78,822	0/0:36,0:36:99:0,102,1060	0/0:28,0:28:81.20:0,81,862	0/0:33,0:33:81.16:0,81,854	0/0:30,0:30:78.14:0,78,822	0/0:15,0:15:36.08:0,36,383	0/0:20,0:19:42.08:0,42,447	1/1:5,18:23:54.15:785,54,0	1/1:3,22:26:66.14:934,66,0	1/1:3,14:16:36.12:554,36,0	0/0:16,0:16:39.02:0,39,401	0/0:20,0:21:56.84:0,57,578	0/0:23,0:23:60.14:0,60,638	0/0:32,0:32:75.14:0,75,791	1/1:10,21:32:39.75:912,40,0	1/1:4,16:20:57.18:839,57,0	1/1:3,7:12:23.56:314,24,0
chr10	42241788	.	GA	G	3947.48	PASS	AB=0.920;AC=17;AF=0.304;AN=56;BaseQRankSum=12.029;DP=594;FS=16.262;HRun=10;HaplotypeScore=70.9027;InbreedingCoeff=0.9036;MQ=74.61;MQ0=0;MQRankSum=-1.106;QD=18.62;ReadPosRankSum=-0.066;VQSLOD=2.7757;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,30:34:71.95:625,72,0	0/0:6,0:6:15.92:0,16,160	0/1:21,2:22:20.11:20,0,221	0/0:21,0:19:33.40:0,33,332	0/0:32,0:32:81.20:0,81,881	0/0:11,0:11:30.08:0,30,332	0/0:15,0:15:30.08:0,30,332	1/1:8,23:31:71.92:615,72,0	0/0:19,1:20:28.09:0,28,538	0/0:27,0:27:66.18:0,66,730	0/0:15,0:15:39.09:0,39,418	0/0:17,1:18:22.02:0,22,448	0/0:25,0:25:63.16:0,63,688	0/0:10,0:10:27.06:0,27,290	0/0:26,1:28:39.94:0,40,643	0/0:20,0:20:54.15:0,54,597	0/0:36,1:38:73.02:0,73,999	0/0:23,0:23:48.13:0,48,530	1/1:2,9:11:26.95:227,27,0	1/1:2,26:28:71.94:619,72,0	1/1:2,15:17:41.99:365,42,0	0/0:18,1:19:22.07:0,22,464	0/0:21,0:21:45.09:0,45,485	0/0:17,0:16:45.12:0,45,497	0/0:16,0:16:13.06:0,13,372	1/1:2,24:26:41.80:592,42,0	1/1:4,34:38:89.98:781,90,0	1/1:0,4:4:12:104,12,0
chr10	42242278	.	GT	G	8160.16	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=13.225;DP=681;FS=7.484;HRun=2;HaplotypeScore=67.0983;InbreedingCoeff=0.9967;MQ=88.73;MQ0=0;MQRankSum=-3.350;QD=34.72;ReadPosRankSum=-1.045;VQSLOD=4.5695;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,51:53:99:1781,138,0	0/0:6,0:6:15.05:0,15,225	0/0:29,0:29:78.08:0,78,1073	0/0:22,0:22:60.07:0,60,743	0/0:23,0:23:69.23:0,69,1033	0/0:19,0:19:57.15:0,57,810	0/0:24,0:24:69.23:0,69,1034	1/1:1,29:30:87.25:1096,87,0	0/0:15,0:15:45.14:0,45,654	0/0:22,0:22:60.20:0,60,900	0/0:15,0:15:45.15:0,45,674	0/0:26,0:26:75.24:0,75,1104	0/0:24,0:24:72.24:0,72,1078	0/0:24,0:24:72.21:0,72,1036	0/0:26,0:26:75.25:0,75,1123	0/0:23,0:23:69.23:0,69,1034	0/0:22,0:22:66.22:0,66,988	0/0:24,0:24:69.17:0,69,986	1/1:0,22:22:63.20:815,63,0	1/1:0,22:22:63.20:817,63,0	1/1:2,33:35:93.30:1205,93,0	0/0:21,0:21:63.20:0,63,918	0/0:19,0:19:54.18:0,54,807	0/0:36,0:36:99:0,108,1619	0/0:26,0:26:78.24:0,78,1147	1/1:5,26:31:81.26:1045,81,0	1/1:0,34:34:86.98:1128,87,0	1/1:0,8:8:21.07:273,21,0
chr10	42245155	.	CTAAGT	C	12359.05	PASS	AB=0.534;AC=21;AF=0.375;AN=56;BaseQRankSum=18.214;DP=705;FS=6.359;HRun=0;HaplotypeScore=152.4554;InbreedingCoeff=0.9372;MQ=84.19;MQ0=0;MQRankSum=-17.265;QD=44.46;ReadPosRankSum=-0.417;VQSLOD=4.6656;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,30:34:45.15:942,45,0	0/0:11,0:11:33.11:0,33,1021	0/0:30,0:30:78.26:0,78,2175	0/0:20,0:20:60.12:0,60,1494	1/1:1,23:24:48.16:1004,48,0	0/0:24,0:24:72.25:0,72,2198	0/0:23,0:23:66.21:0,66,1920	1/1:5,23:28:69.19:1331,69,0	1/1:1,32:33:78.27:1632,78,0	0/0:26,0:26:78.27:0,78,2368	0/0:28,0:28:81.28:0,81,2438	0/0:22,0:22:66.23:0,66,2024	0/0:34,0:34:99:0,102,3114	0/0:22,0:22:63.22:0,63,1951	0/0:29,0:29:87.30:0,87,2625	1/1:0,23:23:57.04:1193,57,0	0/0:36,0:36:99:0,102,3021	0/0:15,0:15:42.14:0,42,1245	1/1:3,13:16:39.08:747,39,0	1/1:2,32:34:78.27:1632,78,0	1/1:4,15:19:29.22:627,29,0	0/0:30,0:30:84.27:0,84,2455	0/0:30,0:30:87.28:0,87,2627	0/0:20,0:20:60.21:0,60,1790	0/0:27,0:27:81.28:0,81,2449	0/1:4,27:31:5.88:1491,0,6	1/1:0,30:30:69.24:1445,69,0	1/1:0,6:6:15.05:314,15,0
chr10	42246233	.	CA	C	10600.20	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=15.601;DP=744;FS=9.106;HRun=2;HaplotypeScore=70.3011;InbreedingCoeff=0.9997;MQ=86.75;MQ0=0;MQRankSum=-6.455;QD=35.69;ReadPosRankSum=0.566;VQSLOD=4.8940;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,33:35:87.28:1130,87,0	0/0:9,0:9:27.09:0,27,405	0/0:21,0:21:57.18:0,57,798	0/0:28,0:28:84.28:0,84,1203	1/1:0,26:26:78.25:1012,78,0	0/0:35,0:35:99:0,105,1569	0/0:34,0:34:99:0,102,1481	1/1:0,36:36:99:1385,108,0	1/1:0,24:24:60.20:779,60,0	0/0:25,0:25:75.25:0,75,1098	0/0:26,0:26:78.26:0,78,1153	0/0:27,0:27:78.24:0,78,1147	0/0:27,0:27:78.26:0,78,1169	0/0:38,0:38:99:0,114,1691	0/0:32,0:32:93.28:0,93,1360	1/1:0,26:26:66.21:857,66,0	0/0:26,0:26:78.25:0,78,1149	0/0:21,0:21:63.18:0,63,920	1/1:2,22:24:62.94:818,63,0	1/1:2,30:32:84.27:1091,84,0	1/1:0,28:28:81.26:1052,81,0	0/0:24,0:24:72.23:0,72,1054	0/0:32,0:32:93.31:0,93,1373	0/0:21,0:21:60.20:0,60,898	0/0:21,0:21:60.20:0,60,899	1/1:0,24:24:72.22:922,72,0	1/1:0,32:32:93.30:1206,93,0	1/1:0,10:10:27.09:349,27,0
chr10	42249175	.	CA	C	3570.53	PASS	AB=0.684;AC=37;AF=0.661;AN=56;BaseQRankSum=-6.042;DP=556;FS=3.947;HRun=14;HaplotypeScore=74.1905;InbreedingCoeff=0.3662;MQ=51.60;MQ0=31;MQRankSum=1.768;QD=7.55;ReadPosRankSum=3.617;VQSLOD=3.0283;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,17:32:42.87:268,43,0	0/0:6,0:6:12.01:0,12,109	0/0:5,0:1:3:0,3,28	0/0:7,0:4:4.24:0,4,32	0/0:13,1:23:18.50:0,18,191	1/1:7,17:24:40.77:250,41,0	0/1:9,9:17:23.79:103,0,24	1/1:7,15:24:37.60:252,38,0	0/0:9,0:16:5.62:0,6,110	1/1:11,14:24:20.55:143,21,0	1/1:6,6:12:16.80:109,17,0	1/1:5,17:26:15.56:168,16,0	0/1:9,10:19:58.18:98,0,58	1/1:6,12:20:33.72:212,34,0	1/1:8,15:24:16.44:218,16,0	0/0:8,0:23:37.24:0,37,210	0/1:26,3:26:9.20:9,0,214	0/1:10,5:10:16.05:50,0,16	0/1:8,13:20:34.86:188,0,35	1/1:9,11:20:11.99:210,12,0	1/1:5,5:10:10.96:68,11,0	1/1:10,8:18:20.74:144,21,0	1/1:10,7:20:5.22:154,5,0	1/1:9,14:23:32.38:226,32,0	0/1:8,12:18:1.08:138,0,1	0/1:4,10:15:37.31:153,0,37	1/1:5,21:26:30.25:295,30,0	1/1:6,7:12:18.93:115,19,0
chr10	42249458	.	C	CA	4280.54	PASS	AB=0.689;AC=45;AF=0.804;AN=56;BaseQRankSum=-1.943;DP=505;FS=0.000;HRun=13;HaplotypeScore=67.8748;InbreedingCoeff=0.4119;MQ=78.55;MQ0=3;MQRankSum=-0.443;QD=9.64;ReadPosRankSum=-0.849;VQSLOD=3.8585;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,9:12:9.01:84,9,0	0/0:6,0:7:16.92:0,17,109	0/0:29,0:19:6.72:0,7,77	0/1:20,0:16:4.61:5,0,32	1/1:7,1:23:22.67:197,23,0	0/1:9,13:23:2.29:254,0,2	1/1:4,9:16:12.25:187,12,0	1/1:8,4:30:35.79:406,36,0	1/1:3,0:11:19.97:103,20,0	0/1:9,11:21:19.84:244,0,20	1/1:6,16:22:22.39:334,22,0	1/1:4,11:15:12.01:111,12,0	1/1:0,21:21:30.02:275,30,0	1/1:4,10:15:11.84:94,12,0	0/1:6,13:20:0.40:169,0,0	1/1:3,0:20:31.43:164,31,0	0/0:21,0:23:39.07:0,39,255	1/1:4,7:9:6.01:56,6,0	1/1:7,4:22:49.59:334,50,0	1/1:3,1:17:34.55:198,35,0	1/1:3,0:13:25.71:138,26,0	0/1:3,8:11:11.57:47,0,12	1/1:7,10:20:2.04:206,2,0	1/1:2,13:15:4.71:133,5,0	1/1:6,2:9:8.15:96,8,0	1/1:4,2:21:25.24:220,25,0	1/1:9,1:27:28.07:142,28,0	1/1:3,2:7:11.25:84,11,0
chr10	42250789	.	T	TAC	39.30	PASS	AB=1.000;AC=12;AF=0.400;AN=30;BaseQRankSum=-0.355;DP=455;FS=4.876;HRun=0;HaplotypeScore=80.6676;InbreedingCoeff=0.3932;MQ=72.23;MQ0=11;MQRankSum=-0.426;QD=0.27;ReadPosRankSum=-2.061;VQSLOD=0.9808;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	0/0:14,0:14:5.84:0,6,61	0/1:17,0:16:0:0,0,0	./.	./.	./.	1/1:18,0:18:0.47:1,0,0	./.	1/1:9,5:14:5.75:55,6,0	0/1:10,0:10:0:0,0,0	1/1:16,1:17:4.98:60,5,0	0/0:25,0:27:12.46:0,12,69	0/0:22,0:22:11.92:0,12,103	0/1:21,0:21:0:0,0,0	0/1:14,0:14:7.67:13,0,8	./.	0/0:9,0:14:8.52:0,9,42	0/1:30,0:30:0:0,0,0	./.	./.	0/0:22,0:20:3.21:0,3,12	./.	./.	0/0:9,0:11:2.84:0,3,14	0/1:1,0:1:0:0,0,0
chr10	42251206	.	CAA	C	2856.21	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-3.689;DP=462;FS=2.668;HRun=11;HaplotypeScore=68.3990;InbreedingCoeff=0.9284;MQ=59.48;MQ0=4;MQRankSum=-0.604;QD=20.11;ReadPosRankSum=0.222;VQSLOD=2.9671;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,14:16:34.50:380,35,0	0/0:8,0:8:21.07:0,21,323	0/0:4,0:4:12.04:0,12,177	0/0:7,0:2:5.38:0,5,54	0/0:8,0:33:61.89:0,62,281	0/0:4,0:14:36.05:0,36,343	0/0:4,0:17:30.05:0,30,299	1/1:7,23:30:66.10:702,66,0	0/0:0,0:14:27.45:0,27,94	0/0:9,0:9:24.08:0,24,369	0/0:16,0:15:42.05:0,42,561	0/0:4,0:15:33.06:0,33,347	0/0:2,0:17:36.50:0,37,353	0/0:2,0:15:21.03:0,21,201	0/0:10,0:12:29.07:0,29,387	0/0:4,0:22:42.92:0,43,162	0/0:20,0:20:54.15:0,54,787	0/0:15,0:14:33.10:0,33,487	1/1:9,16:22:29.38:482,29,0	1/1:0,16:16:42.08:447,42,0	1/1:4,13:18:33.60:360,34,0	0/0:6,0:15:30.02:0,30,296	0/0:5,0:20:29.85:0,30,250	0/0:3,0:17:33.04:0,33,311	0/0:26,0:27:71.65:0,72,965	1/1:5,13:17:39.08:415,39,0	1/1:3,11:14:7.04:235,7,0	1/1:2,1:3:2.99:32,3,0
chr10	42252293	.	ACCTACTT	A	9639.90	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=10.002;DP=717;FS=2.503;HRun=0;HaplotypeScore=169.4363;InbreedingCoeff=0.7267;MQ=62.39;MQ0=0;MQRankSum=-3.190;QD=23.63;ReadPosRankSum=-2.169;VQSLOD=4.2631;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:8,24:32:24.92:594,25,0	0/0:11,0:11:30.10:0,30,928	0/0:22,0:21:30.04:0,30,490	0/0:22,0:20:25.58:0,26,562	0/1:25,0:25:99:397,0,684	0/0:37,0:37:78.22:0,78,2254	0/0:20,0:20:45.14:0,45,1181	1/1:24,21:45:60.03:721,60,0	0/1:22,0:22:99:148,0,636	1/1:10,16:26:48.11:811,48,0	1/1:4,20:24:42.14:764,42,0	0/0:28,0:28:69.24:0,69,2316	0/0:29,0:29:72.25:0,72,2027	0/0:29,0:29:69.22:0,69,1934	1/1:5,24:29:36.12:809,36,0	0/1:26,0:25:99:637,0,518	0/0:29,0:29:75.26:0,75,2353	1/1:6,9:15:3.01:38,3,0	1/1:8,11:19:14.15:596,14,0	1/1:4,25:29:69.23:1259,69,0	1/1:6,10:16:3.01:37,3,0	0/0:25,0:25:54.19:0,54,1620	0/0:36,0:36:96.33:0,96,3065	0/0:20,0:20:51.17:0,51,1480	1/1:10,14:24:27.09:631,27,0	1/1:10,23:33:66.19:1285,66,0	1/1:10,24:34:30.10:701,30,0	1/1:3,6:9:9.03:210,9,0
chr10	42253132	.	AT	A	7974.40	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=2.404;DP=505;FS=3.466;HRun=1;HaplotypeScore=69.3327;InbreedingCoeff=0.9984;MQ=70.42;MQ0=0;MQRankSum=-0.689;QD=37.62;ReadPosRankSum=0.165;VQSLOD=5.1968;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,11:14:36.11:481,36,0	0/0:14,0:13:33.09:0,33,482	0/0:14,0:14:42.09:0,42,563	0/0:9,0:9:24.05:0,24,322	1/1:4,30:30:75.20:1002,75,0	0/0:18,0:18:51.17:0,51,780	0/0:8,0:8:21.07:0,21,321	1/1:0,31:31:90.26:1193,90,0	1/1:0,13:13:39.13:544,39,0	0/0:23,0:23:69.23:0,69,1055	0/0:29,0:28:63.13:0,63,909	0/0:9,0:9:27.05:0,27,349	0/0:20,0:20:60.20:0,60,918	0/0:22,0:22:66.22:0,66,996	0/0:20,0:20:57.19:0,57,870	1/1:1,15:16:48.16:670,48,0	0/0:19,0:19:48.16:0,48,732	0/0:17,0:17:48.14:0,48,703	1/1:5,13:18:54.13:713,54,0	1/1:3,17:20:57.18:780,57,0	1/1:0,9:9:24.08:335,24,0	0/0:11,0:11:30.10:0,30,445	0/0:21,0:19:48.08:0,48,692	0/0:11,0:11:33.08:0,33,460	0/0:28,0:28:69.23:0,69,1052	1/1:1,20:21:63.20:865,63,0	1/1:3,21:24:72.22:972,72,0	1/1:0,12:11:30.10:419,30,0
chr10	42253385	.	G	GA	3774.03	PASS	AB=0.729;AC=40;AF=0.769;AN=52;BaseQRankSum=2.902;DP=538;FS=11.148;HRun=1;HaplotypeScore=155.8140;InbreedingCoeff=0.0851;MQ=34.27;MQ0=19;MQRankSum=-1.836;QD=7.62;ReadPosRankSum=-1.471;VQSLOD=-0.5351;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,7:11:2.98:23,3,0	0/0:7,0:7:21.07:0,21,294	./.	./.	1/1:14,18:28:11.99:164,12,0	1/1:11,8:19:6.71:116,7,0	1/1:13,6:15:9.03:141,9,0	0/1:32,2:18:82.54:83,0,496	1/1:5,15:18:9.08:139,9,0	0/1:16,8:24:99:267,0,513	1/1:15,6:19:6.02:95,6,0	1/1:9,8:17:5.36:138,5,0	1/1:16,7:21:11.63:185,12,0	1/1:6,8:11:2.58:47,3,0	0/0:18,16:32:20.86:0,21,292	1/1:4,17:20:8.60:131,9,0	0/1:20,5:22:19.01:19,0,535	1/1:2,6:7:17.27:238,17,0	0/1:5,4:8:88.59:171,0,89	1/1:17,10:25:8.61:140,9,0	1/1:8,1:6:1.25:4,1,0	1/1:11,5:16:12.04:190,12,0	1/1:10,9:17:18.06:271,18,0	0/1:5,12:16:0:1,0,0	1/1:18,10:26:11.93:143,12,0	0/1:14,13:22:99:385,0,209	0/1:21,13:34:99:277,0,594	0/1:7,10:13:8.81:406,0,9
chr10	42253447	.	GTAGATAGA	G	1723.71	PASS	AB=0.779;AC=17;AF=0.386;AN=44;BaseQRankSum=-2.811;DP=562;FS=0.000;HRun=0;HaplotypeScore=134.0723;InbreedingCoeff=0.3153;MQ=28.43;MQ0=38;MQRankSum=-1.994;QD=7.49;ReadPosRankSum=-2.153;VQSLOD=2.1654;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:11,3:7:6.02:79,6,0	0/0:2,0:7:0:0,0,0	./.	./.	./.	1/1:10,8:15:9.03:118,9,0	1/1:10,1:9:3.01:76,3,0	1/1:45,0:23:21.04:270,21,0	0/0:23,0:19:8.94:0,9,207	0/0:23,0:35:29.48:0,29,912	0/0:30,0:32:0:0,0,0	0/0:14,0:14:3.01:0,3,47	1/1:12,11:18:5.62:116,6,0	0/0:5,9:8:0:0,0,0	0/0:22,0:23:15.52:0,16,291	0/0:28,0:27:11.94:0,12,148	0/0:15,0:12:18.53:0,19,718	0/0:14,0:13:14.90:0,15,274	0/1:10,1:10:61.79:182,0,62	./.	./.	1/1:8,8:11:2.97:20,3,0	0/1:10,5:13:0:0,0,0	./.	0/0:27,0:21:0.39:0,0,1	0/1:19,10:27:71.09:697,0,71	0/1:18,15:28:69.36:239,0,69	0/1:10,3:10:64.28:64,0,102
chr10	42253477	.	AGATAGAT	A	554.84	PASS	AB=0.970;AC=12;AF=0.240;AN=50;BaseQRankSum=1.928;DP=579;FS=1.828;HRun=0;HaplotypeScore=155.7897;InbreedingCoeff=-0.1490;MQ=28.59;MQ0=40;MQRankSum=-4.427;QD=2.35;ReadPosRankSum=1.495;VQSLOD=2.8596;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:10:5.03:0,5,27	0/0:10,0:7:3.01:0,3,42	0/0:15,0:1:3.01:0,3,42	./.	./.	0/0:25,0:20:3.63:0,4,45	0/1:14,0:8:25.21:25,0,75	0/0:47,0:19:32.71:0,33,359	0/0:21,0:18:8.26:0,8,122	0/1:38,0:35:64.24:64,0,708	0/0:28,0:25:0.27:0,0,1	0/0:14,0:8:2.99:0,3,45	1/1:21,0:16:1.15:31,1,0	0/1:18,0:13:20.16:20,0,36	0/0:26,0:24:9.03:0,9,182	0/1:21,0:21:1.08:107,0,1	0/0:18,0:13:18.73:0,19,709	0/1:15,0:13:1.31:1,0,243	0/1:8,0:5:56.05:56,0,61	0/0:18,0:16:2.83:0,3,44	0/0:11,0:7:3.01:0,3,42	0/0:19,0:16:5.99:0,6,64	0/0:17,0:16:3.17:0,3,42	./.	0/1:17,13:24:0.11:0,0,1	0/1:29,0:20:99:253,0,199	0/1:28,0:20:68.13:102,0,68	0/1:14,0:14:16.44:16,0,186
chr10	42253481	.	AGAT	A	469.67	PASS	AB=1.000;AC=11;AF=0.212;AN=52;BaseQRankSum=3.986;DP=590;FS=0.000;HRun=0;HaplotypeScore=149.1748;InbreedingCoeff=-0.0582;MQ=28.91;MQ0=42;MQRankSum=-4.015;QD=1.93;ReadPosRankSum=1.990;VQSLOD=2.6435;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:16,1:10:8.82:0,9,84	0/0:11,0:8:6.02:0,6,84	0/0:18,0:1:3.01:0,3,42	./.	./.	0/0:25,0:20:7.51:0,8,84	0/0:14,0:8:1.71:0,2,77	0/0:47,0:21:44.49:0,44,567	0/1:21,0:18:49.77:50,0,59	0/1:37,0:34:63.34:63,0,691	0/1:28,0:25:0.20:0,0,1	0/0:14,0:8:2.93:0,3,19	0/1:21,0:16:8.31:8,0,15	0/1:19,0:14:35.83:40,0,36	0/0:26,0:24:8.91:0,9,130	1/1:6,15:21:17.91:274,18,0	0/0:19,0:14:19.12:0,19,441	0/0:16,0:13:1.97:0,2,203	0/1:9,0:5:40.01:40,0,46	0/0:20,0:18:18:0,18,229	0/0:11,0:8:3.01:0,3,42	0/0:19,0:16:6.02:0,6,83	0/0:18,0:17:8.34:0,8,126	0/0:13,0:11:3:0,3,42	0/1:30,0:24:0.08:0,0,1	0/1:29,0:20:85.43:85,0,286	0/1:28,0:20:38.15:38,0,116	0/0:14,0:14:9:0,9,224
chr10	42253505	.	GTAGATAGA	G	1360.94	PASS	AB=0.879;AC=21;AF=0.438;AN=48;BaseQRankSum=-2.050;DP=567;FS=2.589;HRun=0;HaplotypeScore=170.3153;InbreedingCoeff=0.4838;MQ=32.57;MQ0=44;MQRankSum=-3.573;QD=4.73;ReadPosRankSum=-3.648;VQSLOD=1.8676;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:9:0:0,0,0	0/0:6,0:7:12.04:0,12,289	./.	./.	1/1:24,2:25:12.14:186,12,0	1/1:17,15:27:14.92:178,15,0	./.	0/0:50,0:18:3.01:0,3,31	1/1:15,1:14:11.54:133,12,0	0/1:19,0:24:12.36:359,0,12	1/1:23,0:23:6.45:95,6,0	./.	1/1:16,2:14:6.76:41,7,0	1/1:13,5:13:5.91:148,6,0	0/1:20,0:22:2.12:2,0,5	1/1:21,1:22:3.85:76,4,0	0/1:19,0:15:9.63:85,0,10	0/1:14,0:11:39.23:39,0,110	0/0:13,0:8:13.30:0,13,84	0/0:29,0:27:37.66:0,38,182	0/0:11,0:8:7.69:0,8,28	1/1:17,4:17:11.85:181,12,0	0/0:14,0:21:26.87:0,27,213	0/0:13,0:15:2.99:0,3,24	0/1:19,0:25:0.03:0,0,1	0/0:22,0:15:13.74:0,14,84	0/0:29,0:21:13.62:0,14,61	0/0:9,0:9:15.54:0,16,64
chr10	42253507	.	A	AGAT	693.89	PASS	AB=0.968;AC=11;AF=0.212;AN=52;BaseQRankSum=0.230;DP=570;FS=0.000;HRun=0;HaplotypeScore=159.8020;InbreedingCoeff=0.3201;MQ=33.14;MQ0=44;MQRankSum=-0.255;QD=4.28;ReadPosRankSum=-1.210;VQSLOD=2.3157;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:10:2.74:0,3,12	1/1:8,0:7:11.92:86,12,0	0/0:14,0:1:3.01:0,3,46	./.	1/1:20,5:24:9.03:180,9,0	0/0:32,0:27:7.78:0,8,94	./.	0/0:49,0:17:51.13:0,51,725	0/1:13,3:14:12.08:126,0,12	0/0:24,0:23:49.92:0,50,555	0/0:23,0:23:8.13:0,8,57	0/0:15,0:12:3.01:0,3,46	0/0:17,1:14:1.07:0,1,2	0/1:16,0:13:21.99:35,0,22	0/0:24,0:22:1.50:0,2,5	1/1:23,2:24:20.49:310,20,0	0/1:20,0:17:46.68:47,0,115	0/0:17,0:13:6.99:0,7,275	0/0:12,0:9:27.07:0,27,340	0/0:29,0:27:45.05:0,45,499	0/0:11,0:8:9.01:0,9,87	0/1:21,0:17:36.66:55,0,37	0/0:23,0:22:26.87:0,27,270	0/0:17,0:15:2.98:0,3,30	0/1:30,0:25:0.16:0,0,1	0/0:23,0:16:42.12:0,42,573	0/0:28,0:21:32.90:0,33,392	0/0:9,0:9:14.98:0,15,151
chr10	42253511	.	A	AGAT	617.39	PASS	AB=0.930;AC=8;AF=0.160;AN=50;BaseQRankSum=0.656;DP=568;FS=0.820;HRun=0;HaplotypeScore=163.0394;InbreedingCoeff=0.1574;MQ=34.07;MQ0=46;MQRankSum=-0.783;QD=4.12;ReadPosRankSum=-0.754;VQSLOD=2.5091;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:10:2.80:0,3,13	1/1:7,0:6:11.92:86,12,0	./.	./.	0/0:27,0:26:14.60:0,15,128	0/1:30,1:27:57.94:60,0,58	./.	0/0:50,0:17:48.15:0,48,708	0/1:16,0:14:1.85:2,0,2	0/1:25,1:25:99:399,0,306	0/1:17,6:23:8.44:128,0,8	0/0:15,0:12:3.01:0,3,46	0/0:17,0:15:1.04:0,1,2	0/0:16,0:13:4.72:0,5,28	0/0:24,2:24:2.17:0,2,8	0/0:25,0:24:3.54:0,4,58	0/0:19,0:15:20.33:0,20,252	0/1:15,3:14:60.98:61,0,273	0/0:12,0:9:27.07:0,27,352	0/0:30,0:28:50.89:0,51,550	0/0:11,0:8:9.01:0,9,85	0/0:18,0:16:3.93:0,4,47	0/0:24,0:23:31.12:0,31,352	0/0:17,0:15:2.98:0,3,29	0/1:29,0:24:0.16:0,0,1	0/0:23,0:16:32.37:0,32,522	0/0:27,0:21:31.66:0,32,383	0/0:9,0:9:17.98:0,18,184
chr10	42253540	.	GATA	G	605.50	PASS	AB=0.864;AC=9;AF=0.161;AN=56;BaseQRankSum=5.930;DP=575;FS=4.672;HRun=0;HaplotypeScore=158.4945;InbreedingCoeff=-0.2267;MQ=46.64;MQ0=22;MQRankSum=0.131;QD=3.11;ReadPosRankSum=6.795;VQSLOD=1.9528;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:16:18.06:0,18,230	0/0:7,0:7:15.05:0,15,265	0/0:9,0:7:21.06:0,21,262	0/0:8,0:4:8.51:0,9,87	0/0:25,0:24:1.53:0,2,293	0/0:31,0:29:16.84:0,17,320	0/0:14,0:11:8.82:0,9,116	0/0:48,0:34:97.12:0,97,596	0/0:13,0:11:11.97:0,12,120	0/1:27,0:26:9.31:9,0,674	0/0:23,0:23:33.76:0,34,442	0/0:13,0:12:6.02:0,6,78	0/0:16,0:14:15.72:0,16,227	0/1:13,0:13:15.69:16,0,30	0/0:28,0:26:28.37:0,28,403	0/0:23,0:22:36.89:0,37,407	0/0:18,0:14:6.19:0,6,189	0/0:17,0:14:27.04:0,27,377	0/1:10,3:11:66.50:66,0,90	0/1:20,11:30:66.09:298,0,66	0/1:9,4:10:17.11:73,0,17	0/0:22,0:21:21.07:0,21,481	0/1:22,0:22:19.94:20,0,159	0/0:19,0:17:1.30:0,1,71	0/0:25,0:23:29.89:0,30,390	0/1:21,4:20:73.98:74,0,159	0/1:21,6:23:87:87,0,148	0/1:17,6:22:97.89:98,0,187
chr10	42253544	.	GA	G	103.29	PASS	AB=0.815;AC=6;AF=0.107;AN=56;BaseQRankSum=7.214;DP=571;FS=3.904;HRun=1;HaplotypeScore=145.8562;InbreedingCoeff=-0.1411;MQ=47.79;MQ0=20;MQRankSum=0.417;QD=0.83;ReadPosRankSum=2.786;VQSLOD=-0.6090;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,1:15:18.06:0,18,260	0/0:7,0:7:15.03:0,15,166	0/0:10,0:8:24.08:0,24,339	0/0:7,0:4:8.94:0,9,105	0/0:24,0:23:25.53:0,26,400	0/0:33,0:31:33.41:0,33,488	0/0:13,0:11:9.03:0,9,132	0/0:48,0:36:76.04:0,76,729	0/0:12,0:10:12.04:0,12,179	0/0:28,0:27:56.96:0,57,859	0/0:23,0:23:39.81:0,40,618	0/0:11,0:10:3.01:0,3,44	0/0:17,0:15:18.74:0,19,302	0/0:14,0:13:6.57:0,7,89	0/0:29,0:27:31.45:0,31,521	0/0:22,0:21:18.39:0,18,394	0/0:20,0:16:16.56:0,17,267	0/1:15,1:13:5.01:5,0,333	0/1:10,3:11:15.15:15,0,113	0/1:22,10:30:99:126,0,143	0/1:9,4:10:21.42:32,0,21	0/0:21,0:20:44.65:0,45,627	0/0:22,0:22:36.13:0,36,353	0/0:16,3:17:7.58:0,8,92	0/0:22,0:22:36.12:0,36,531	0/0:20,4:19:4.36:0,4,218	0/1:21,6:23:15.43:15,0,187	0/1:17,6:22:27.88:28,0,194
chr10	42253595	.	A	AT	6773.47	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-5.290;DP=584;FS=19.052;HRun=8;HaplotypeScore=69.9268;InbreedingCoeff=0.9737;MQ=66.91;MQ0=0;MQRankSum=-1.554;QD=26.05;ReadPosRankSum=0.474;VQSLOD=3.3841;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,18:20:45.08:495,45,0	0/0:4,0:4:11.99:0,12,105	0/0:12,0:11:30.02:0,30,275	0/0:14,0:14:26.95:0,27,236	1/1:1,18:19:23.64:512,24,0	0/0:27,0:25:45.02:0,45,412	0/0:15,0:14:30:0,30,274	1/1:11,30:41:93.25:1047,93,0	1/1:4,14:17:5.63:319,6,0	0/0:32,1:34:60.46:0,60,792	0/0:30,0:30:81.02:0,81,736	0/0:12,0:10:12.01:0,12,110	0/0:23,0:21:39.01:0,39,357	0/0:17,0:17:32.04:0,32,281	0/0:26,0:26:60.02:0,60,545	1/1:2,29:31:50.21:617,50,0	0/0:14,0:14:36.01:0,36,325	0/0:18,0:17:36.01:0,36,329	1/1:2,8:11:26.88:271,27,0	1/1:7,30:37:62.83:977,63,0	1/1:0,9:10:29.92:326,30,0	0/0:23,0:23:57.02:0,57,522	0/0:20,0:20:44.96:0,45,407	0/0:9,0:9:24.01:0,24,220	0/0:25,0:25:54.01:0,54,490	1/1:0,25:24:66.20:761,66,0	1/1:2,20:23:63.19:723,63,0	1/1:1,21:22:63.19:727,63,0
chr10	42256248	.	CTG	C	2846.91	PASS	AB=1.000;AC=37;AF=0.685;AN=54;BaseQRankSum=-1.807;DP=537;FS=0.000;HRun=0;HaplotypeScore=85.2484;InbreedingCoeff=0.7517;MQ=62.35;MQ0=18;MQRankSum=1.804;QD=8.20;ReadPosRankSum=1.907;VQSLOD=3.0249;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:23:17.94:140,18,0	0/0:11,0:11:6.81:0,7,94	0/0:40,0:26:6.10:0,6,119	0/0:32,0:15:5.98:0,6,47	0/0:29,0:29:20.98:0,21,187	1/1:25,0:24:26.88:207,27,0	0/1:22,0:21:42.93:147,0,43	1/1:19,15:33:43.60:361,44,0	0/0:12,0:12:10.51:0,11,71	1/1:9,0:14:14.75:95,15,0	1/1:5,0:15:2.92:18,3,0	1/1:19,0:19:17.66:139,18,0	1/1:25,0:23:13.72:183,14,0	1/1:23,0:23:33.79:303,34,0	1/1:17,0:17:29.83:230,30,0	0/0:12,0:12:8.95:0,9,75	0/0:18,0:17:29.66:0,30,217	1/1:18,0:17:23.59:164,24,0	1/1:16,0:16:20.78:162,21,0	./.	1/1:19,0:18:21.38:160,21,0	1/1:15,0:15:8.99:74,9,0	0/0:15,0:14:2.74:0,3,16	1/1:12,0:12:11.97:96,12,0	1/1:10,0:10:11.91:86,12,0	1/1:12,0:12:20.77:163,21,0	1/1:13,0:11:23.95:191,24,0	1/1:14,0:14:14.91:119,15,0
chr10	42256273	.	TGTGAGAGAGAGAGA	T	2044.44	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=-5.947;DP=496;FS=25.216;HRun=0;HaplotypeScore=162.3049;InbreedingCoeff=-0.1820;MQ=47.92;MQ0=21;MQRankSum=2.567;QD=5.93;ReadPosRankSum=-0.101;VQSLOD=1.0144;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:27:49.15:49,0,128	0/0:13,0:13:6.94:0,7,129	0/0:13,0:8:6.06:0,6,119	0/0:14,0:3:5.98:0,6,47	0/0:24,0:24:24.03:0,24,507	1/1:20,0:19:26.15:205,26,0	0/1:24,0:23:99:117,0,101	0/1:28,0:26:83.20:305,0,83	0/0:16,0:16:18.12:0,18,598	0/1:13,0:13:61.90:62,0,634	0/1:13,0:13:11.70:12,0,164	0/1:18,0:18:88.51:89,0,140	1/1:17,2:18:16.44:480,16,0	0/1:24,0:23:99:142,0,387	0/1:20,0:19:66.31:66,0,797	0/0:14,0:14:18.96:0,19,573	0/0:22,0:20:53.58:0,54,1134	0/1:15,0:13:98.60:99,0,468	0/1:12,0:12:99:102,0,287	0/0:16,0:16:9.28:0,9,155	0/1:25,0:23:99:100,0,421	1/1:16,0:16:8.99:74,9,0	0/0:5,13:17:2.74:0,3,16	1/1:12,0:12:11.97:96,12,0	0/1:10,0:10:49.42:49,0,228	0/1:16,0:15:64.56:65,0,736	0/1:16,0:14:58.24:58,0,608	0/1:12,0:11:49.54:50,0,143
chr10	42256275	.	TGAGA	T	1015.15	PASS	AB=0.826;AC=22;AF=0.458;AN=48;BaseQRankSum=-0.674;DP=482;FS=10.628;HRun=0;HaplotypeScore=105.0331;InbreedingCoeff=0.5159;MQ=47.66;MQ0=20;MQRankSum=-0.298;QD=4.14;ReadPosRankSum=-0.935;VQSLOD=1.2782;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:26:5.68:61,6,0	0/1:8,0:12:0:0,0,0	./.	./.	0/0:26,0:26:5.99:0,6,92	0/0:17,0:16:0:0,0,0	1/1:24,0:23:5.72:80,6,0	0/0:27,0:25:0:0,0,0	0/0:17,0:17:12.26:0,12,203	0/0:13,0:13:12.05:0,12,119	0/0:13,0:13:3.01:0,3,50	1/1:17,0:17:5.89:88,6,0	1/1:18,0:17:8.55:81,9,0	1/1:24,0:23:13.51:199,14,0	0/0:20,0:19:6.41:0,6,175	0/0:16,0:16:12.49:0,12,225	1/1:22,0:20:16.41:180,16,0	0/0:13,0:11:12.04:0,12,172	1/1:13,0:13:5.23:52,5,0	0/1:16,0:16:2.63:67,0,3	1/1:25,0:23:12.33:97,12,0	./.	./.	0/1:10,0:12:0:0,0,0	0/0:10,0:10:4.83:0,5,56	0/1:9,7:15:22.55:195,0,23	1/1:15,0:13:6.88:65,7,0	0/0:10,0:9:1.25:0,1,3
chr10	42257684	.	A	AT	1471.56	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=-8.291;DP=530;FS=0.000;HRun=9;HaplotypeScore=50.7896;InbreedingCoeff=0.8704;MQ=70.11;MQ0=0;MQRankSum=0.256;QD=21.02;ReadPosRankSum=-2.761;VQSLOD=3.0379;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:44.98:0,45,391	0/0:11,1:12:26.96:0,27,234	0/1:13,0:13:2.36:2,0,126	0/0:5,0:5:8.10:0,8,98	1/1:0,19:19:51.10:551,51,0	0/0:11,0:11:30.88:0,31,263	0/0:15,0:15:38.99:0,39,339	0/0:28,0:28:59.96:0,60,518	1/1:2,17:19:42.11:465,42,0	0/0:22,0:22:56.98:0,57,492	0/0:26,0:26:67.98:0,68,575	0/0:15,0:15:38.99:0,39,339	0/0:20,0:20:53.99:0,54,469	0/0:14,0:14:35.96:0,36,307	0/0:23,0:24:65.01:0,65,553	1/1:1,18:19:54.15:597,54,0	0/0:14,0:14:41.99:0,42,365	0/0:19,0:19:53.98:0,54,469	0/0:22,0:22:46.99:0,47,396	0/0:27,0:27:71.94:0,72,620	0/0:18,0:18:44.99:0,45,391	0/0:12,0:12:29.99:0,30,260	0/0:16,0:16:38.97:0,39,339	0/0:17,0:17:47.95:0,48,410	0/0:26,2:28:41.79:0,42,592	0/0:19,0:19:41.98:0,42,365	0/0:32,0:32:86.96:0,87,751	0/0:27,0:27:80.98:0,81,703
chr10	42258998	.	CTG	C	531.38	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=6.386;DP=651;FS=4.788;HRun=0;HaplotypeScore=73.9615;InbreedingCoeff=0.6455;MQ=70.91;MQ0=3;MQRankSum=-0.868;QD=12.96;ReadPosRankSum=0.016;VQSLOD=2.8105;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,18:20:48.16:624,48,0	0/0:8,0:8:18.06:0,18,302	0/0:20,0:17:26.49:0,26,352	0/1:21,0:10:8.68:9,0,91	0/0:27,0:27:63.22:0,63,1053	0/0:21,0:21:60.21:0,60,1016	0/0:27,0:27:75.24:0,75,1229	0/0:31,0:31:78.27:0,78,1320	0/0:25,0:25:72.23:0,72,1189	0/0:26,0:26:66.22:0,66,1098	0/0:28,0:28:72.25:0,72,1202	0/0:16,0:16:45.15:0,45,761	0/0:18,0:18:48.16:0,48,805	0/0:25,0:25:72.22:0,72,1163	0/0:28,0:28:69.22:0,69,1139	0/0:31,0:31:69.24:0,69,1162	0/0:35,0:35:84.26:0,84,1394	0/0:13,0:13:39.13:0,39,633	0/0:18,0:18:51.17:0,51,860	0/0:28,0:28:75.26:0,75,1268	0/0:35,0:34:87.29:0,87,1449	0/0:29,0:29:81.26:0,81,1343	0/0:24,0:24:66.21:0,66,1095	0/0:16,0:16:45.15:0,45,766	0/0:30,0:30:81.28:0,81,1358	0/0:26,0:26:75.25:0,75,1250	0/0:21,0:21:60.19:0,60,967	0/0:4,0:4:9.03:0,9,118
chr10	42259601	.	TGGG	T	4151.24	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-8.158;DP=464;FS=38.746;HRun=11;HaplotypeScore=86.8068;InbreedingCoeff=0.9150;MQ=78.71;MQ0=1;MQRankSum=-2.859;QD=31.93;ReadPosRankSum=3.456;VQSLOD=0.3437;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:28:25.20:0,25,56	0/0:2,0:2:2.99:0,3,24	0/0:24,0:18:40.95:0,41,512	0/0:14,0:12:17.72:0,18,213	0/0:14,0:18:11.53:0,12,292	0/0:11,0:17:23.43:0,23,181	0/0:18,0:22:34.10:0,34,390	1/1:2,9:11:27.06:339,27,0	0/0:14,0:17:37.24:0,37,401	0/0:20,0:22:23.28:0,23,171	0/0:6,0:7:2.99:0,3,23	0/0:22,0:26:49.12:0,49,436	0/0:13,0:18:51.21:0,51,507	0/0:8,0:13:26.98:0,27,272	0/0:18,0:19:35.99:0,36,381	0/0:12,0:17:27.65:0,28,197	0/0:9,0:9:15.03:0,15,247	0/0:4,0:9:25.77:0,26,215	1/1:1,14:15:42.01:510,42,0	1/1:2,22:24:69.16:883,69,0	1/1:1,14:15:33.10:434,33,0	0/0:10,0:14:25.98:0,26,219	0/0:11,0:15:16.21:0,16,141	0/0:7,0:15:34.21:0,34,378	0/0:6,0:8:10.22:0,10,75	1/1:1,19:20:60.18:771,60,0	1/1:4,25:28:75.23:979,75,0	1/1:2,14:16:18.04:237,18,0
chr10	42280369	.	G	GA	4775.70	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=-15.210;DP=729;FS=1.969;HRun=8;HaplotypeScore=82.0950;InbreedingCoeff=0.9243;MQ=71.08;MQ0=0;MQRankSum=0.229;QD=25.40;ReadPosRankSum=1.721;VQSLOD=5.6109;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,31:36:84.25:963,84,0	0/0:10,0:10:24.01:0,24,220	0/0:20,0:20:15.46:0,15,195	0/1:11,0:11:2.42:2,0,112	0/0:39,0:39:99:0,111,993	0/0:26,0:26:72.04:0,72,659	0/0:24,0:24:69.01:0,69,626	0/0:37,0:37:96.49:0,96,870	0/0:33,0:33:89.95:0,90,809	1/1:4,20:24:60.18:693,60,0	1/1:6,25:31:35.72:665,36,0	0/0:22,0:22:57.01:0,57,517	0/0:19,0:19:50.99:0,51,454	0/0:31,0:31:78.02:0,78,708	1/1:1,31:32:87.09:984,87,0	0/0:24,0:24:60.02:0,60,549	0/0:23,0:23:66.03:0,66,604	1/1:2,22:23:11.26:637,11,0	0/0:16,0:16:36.22:0,36,311	0/0:40,0:40:99:0,106,961	0/0:21,0:21:63.02:0,63,570	0/0:22,0:22:54.01:0,54,489	0/0:37,0:37:87.03:0,87,796	0/0:20,0:20:59.99:0,60,541	1/1:2,27:29:72.21:831,72,0	0/0:24,1:25:28.33:0,28,502	0/0:37,0:37:99:0,101,896	0/0:15,0:15:45.02:0,45,412
chr10	42282411	.	GGGT	G	43.69	PASS	AB=0.940;AC=8;AF=0.143;AN=56;BaseQRankSum=6.497;DP=303;FS=29.769;HRun=0;HaplotypeScore=52.1968;InbreedingCoeff=-0.1489;MQ=74.93;MQ0=0;MQRankSum=0.612;QD=0.52;ReadPosRankSum=5.550;VQSLOD=0.1320;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:31.07:0,31,298	0/0:7,0:7:14.97:0,15,147	0/0:16,0:11:14.24:0,14,228	0/0:6,0:6:5.81:0,6,63	0/0:11,0:11:21:0,21,127	0/0:10,0:10:23.90:0,24,227	0/0:16,0:16:36.06:0,36,396	0/0:19,1:18:32.87:0,33,343	0/1:10,0:10:3.15:3,0,25	0/1:5,1:6:5.33:5,0,81	0/0:7,0:7:3.22:0,3,116	0/0:7,0:7:5.92:0,6,95	0/0:7,0:7:18.05:0,18,259	0/0:11,0:11:32.60:0,33,363	0/1:10,0:10:12.56:13,0,114	0/0:14,0:14:11.95:0,12,58	0/1:23,0:23:58.95:59,0,238	0/1:18,0:18:42.61:43,0,99	0/0:6,0:6:18:0,18,184	0/0:5,0:5:14.73:0,15,135	0/0:18,0:18:26.71:0,27,256	0/1:8,0:8:0.45:0,0,131	0/0:6,0:6:15.49:0,15,181	0/0:9,0:9:21.01:0,21,266	0/1:2,2:4:15.92:32,0,16	0/0:9,0:9:20.94:0,21,191	0/1:5,0:5:2.93:3,0,89	0/0:10,0:10:20.88:0,21,197
chr10	42287779	.	AGAGAGAGAGAGAGAG	A	1565.26	PASS	AB=0.881;AC=5;AF=0.089;AN=56;BaseQRankSum=7.123;DP=585;FS=4.446;HRun=0;HaplotypeScore=245.4851;InbreedingCoeff=0.2985;MQ=51.00;MQ0=13;MQRankSum=-7.677;QD=26.09;ReadPosRankSum=1.011;VQSLOD=2.3951;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:19,0:18:92.42:467,0,92	0/1:4,0:4:2.94:225,0,3	0/0:19,0:9:27.05:0,27,456	0/0:34,0:12:34.14:0,34,533	0/1:8,10:18:23.55:558,0,24	0/0:32,0:32:73.96:0,74,1130	0/0:18,0:17:40.10:0,40,980	0/0:23,0:23:60.14:0,60,1351	1/1:19,0:19:1.45:426,1,0	0/0:21,0:21:46.04:0,46,825	0/0:12,0:12:8.16:0,8,294	0/0:20,0:20:22.27:0,22,852	0/0:23,0:22:18.52:0,19,826	0/0:17,0:15:21.06:0,21,791	0/0:20,0:20:59.84:0,60,2073	0/0:16,0:14:25.70:0,26,381	0/0:27,0:27:62.76:0,63,1460	0/0:13,0:13:33.66:0,34,961	0/0:22,0:22:62.50:0,62,1973	0/0:26,0:26:68.30:0,68,2601	0/0:28,0:28:52.20:0,52,2159	0/0:29,0:29:59.91:0,60,968	0/0:13,0:12:21.32:0,21,814	0/0:18,0:17:26.35:0,26,822	0/0:26,0:26:65.52:0,66,2148	0/0:32,0:32:94.80:0,95,3156	0/0:24,0:24:71.70:0,72,2756	0/0:12,0:11:32.50:0,33,939
chr10	42287783	.	AGAGAGAGAGAG	A	1607.53	PASS	AB=0.982;AC=8;AF=0.143;AN=56;BaseQRankSum=8.990;DP=570;FS=7.550;HRun=0;HaplotypeScore=207.9357;InbreedingCoeff=0.0670;MQ=54.38;MQ0=12;MQRankSum=-8.337;QD=15.92;ReadPosRankSum=1.430;VQSLOD=1.4205;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:19,0:18:41.51:330,0,42	0/1:4,0:4:17.94:149,0,18	0/0:20,0:11:32.12:0,32,445	0/0:33,0:15:38.71:0,39,472	0/1:18,0:18:40.50:326,0,41	0/0:31,0:31:70.35:0,70,794	0/0:20,0:19:44.54:0,45,732	0/0:24,0:24:64.35:0,64,862	1/1:6,10:16:5.26:706,5,0	0/1:19,0:20:89.79:90,0,200	0/1:9,0:9:18.08:18,0,77	0/0:18,0:18:13.24:0,13,491	0/0:21,0:20:12.51:0,13,541	0/0:14,0:12:15.02:0,15,428	0/0:17,0:17:50.78:0,51,1167	0/1:14,0:13:59.45:124,0,59	0/0:27,0:27:62.67:0,63,754	0/0:11,0:11:26.73:0,27,560	0/0:24,0:24:67.70:0,68,1331	0/0:27,0:27:70.50:0,70,1618	0/0:29,0:29:54.53:0,55,1373	0/0:28,0:28:62.45:0,62,737	0/0:11,0:10:22.15:0,22,590	0/0:18,0:17:26.21:0,26,609	0/0:27,0:27:68.38:0,68,1262	0/0:32,0:32:90.44:0,90,1996	0/0:23,0:23:68.58:0,69,1740	0/0:14,0:13:37.87:0,38,614
chr10	42287787	.	AGAGAGAG	A	1206.51	PASS	AB=0.927;AC=8;AF=0.143;AN=56;BaseQRankSum=9.293;DP=563;FS=3.107;HRun=0;HaplotypeScore=171.6440;InbreedingCoeff=0.0507;MQ=56.68;MQ0=11;MQRankSum=-8.206;QD=11.95;ReadPosRankSum=2.259;VQSLOD=2.2300;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:19,0:18:38.60:215,0,39	0/1:4,0:4:17.94:93,0,18	0/0:19,0:12:34.65:0,35,430	0/0:29,0:16:45.52:0,46,578	0/1:20,0:20:77.07:161,0,77	0/0:32,0:32:73.21:0,73,607	0/0:20,0:19:44.08:0,44,528	0/0:21,0:21:57.46:0,57,429	1/1:16,0:16:4.97:428,5,0	0/1:17,3:20:99:195,0,111	0/1:9,2:11:63.12:63,0,66	0/0:18,0:18:13.21:0,13,292	0/0:21,0:20:12.51:0,13,338	0/0:15,0:13:9.03:0,9,205	0/0:18,0:18:37.76:0,38,403	0/1:9,2:9:45.16:187,0,45	0/0:25,0:25:42.19:0,42,224	0/0:10,0:10:26.65:0,27,264	0/0:26,0:26:69.98:0,70,641	0/0:29,0:29:69.81:0,70,698	0/0:28,0:28:6.34:0,6,611	0/0:27,0:27:59.94:0,60,534	0/0:13,0:12:25.59:0,26,433	0/0:18,0:17:29.11:0,29,418	0/0:25,0:25:44:0,44,393	0/0:28,0:28:72.11:0,72,833	0/0:24,0:24:68.31:0,68,795	0/0:15,0:14:40.37:0,40,314
chr10	42287794	.	G	GAGAGAGAA	8451.34	PASS	AB=1.000;AC=39;AF=0.696;AN=56;BaseQRankSum=-8.097;DP=512;FS=26.296;HRun=0;HaplotypeScore=152.9529;InbreedingCoeff=-0.1051;MQ=61.55;MQ0=7;MQRankSum=0.340;QD=18.25;ReadPosRankSum=-0.725;VQSLOD=2.6122;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:19,0:18:90.08:180,0,90	0/1:6,0:6:58.10:86,0,58	0/0:20,0:14:34.64:0,35,328	0/0:29,0:18:46.59:0,47,472	0/1:22,0:22:72.37:235,0,72	1/1:28,0:28:77.88:731,78,0	1/1:19,0:18:40.61:394,41,0	1/1:22,0:22:62.86:536,63,0	0/1:20,0:20:99:175,0,181	0/1:23,0:23:77.05:418,0,77	1/1:16,0:16:44.08:377,44,0	1/1:0,10:12:11.80:224,12,0	1/1:0,11:13:9.03:406,9,0	1/1:2,11:14:6.02:211,6,0	0/1:15,0:15:99:134,0,210	0/1:9,0:9:14.10:110,0,14	0/1:24,0:24:27.83:358,0,28	0/1:10,0:10:68.78:92,0,69	1/1:23,0:23:8.24:441,8,0	0/1:26,0:26:13:452,0,13	0/1:20,0:20:4.21:358,0,4	1/1:22,0:22:65.79:642,66,0	1/1:13,0:13:30.91:254,31,0	1/1:13,0:13:29.99:412,30,0	0/1:20,0:20:68.86:304,0,69	1/1:19,0:19:25.69:397,26,0	0/1:19,0:19:93.92:244,0,94	1/1:11,0:11:32.93:281,33,0
chr10	42289017	.	C	CGAG	1530.37	PASS	AB=0.551;AC=9;AF=0.161;AN=56;BaseQRankSum=16.323;DP=697;FS=4.413;HRun=0;HaplotypeScore=124.5348;InbreedingCoeff=0.1084;MQ=73.26;MQ0=4;MQRankSum=0.114;QD=6.96;ReadPosRankSum=6.217;VQSLOD=2.2956;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,102,1988	0/0:12,0:12:36.09:0,36,608	0/0:27,0:23:54.14:0,54,869	0/0:38,0:28:3.22:0,3,642	0/1:5,2:34:63.92:385,0,64	0/0:22,0:22:63.21:0,63,1136	0/0:24,0:24:72.22:0,72,1233	0/0:44,0:44:99:0,129,2237	0/1:6,1:32:99:523,0,126	0/1:10,0:37:99:143,0,265	0/1:6,0:30:99:104,0,176	0/0:16,0:16:48.16:0,48,879	0/0:18,0:18:54.17:0,54,960	0/0:19,0:19:57.19:0,57,1016	1/1:0,0:18:29.94:104,30,0	0/1:3,0:16:4.79:278,0,5	0/0:27,0:27:75.14:0,75,1279	0/1:2,0:23:47.10:67,0,47	0/0:18,0:18:54.10:0,54,876	0/0:34,0:34:99:0,99,1727	0/0:10,0:10:27.06:0,27,432	0/0:20,0:20:57.20:0,57,1046	0/0:18,0:18:51.17:0,51,903	0/0:27,0:27:75.26:0,75,1323	0/1:6,0:29:73.81:74,0,189	0/0:25,0:25:66.08:0,66,1245	0/0:21,0:21:63.20:0,63,1126	0/0:14,0:14:39.13:0,39,711
chr10	42290908	.	T	TA	8713.20	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-13.613;DP=544;FS=20.555;HRun=8;HaplotypeScore=51.9411;InbreedingCoeff=0.9943;MQ=70.89;MQ0=0;MQRankSum=-2.080;QD=26.98;ReadPosRankSum=0.494;VQSLOD=3.1996;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:39.02:0,39,357	0/0:10,0:10:27.01:0,27,247	0/0:14,0:12:24.56:0,25,215	0/0:18,0:16:16.05:0,16,231	1/1:7,27:34:59.59:869,60,0	0/0:15,0:15:36.02:0,36,329	0/0:14,0:14:27.01:0,27,247	1/1:7,19:26:57.17:658,57,0	1/1:2,10:12:23.90:256,24,0	1/1:0,26:25:78.23:900,78,0	1/1:2,21:23:54.12:608,54,0	0/0:13,0:13:39.01:0,39,352	0/0:15,0:15:39.01:0,39,353	0/0:22,0:22:63.03:0,63,577	1/1:1,16:17:45.13:519,45,0	1/1:0,6:6:18.05:208,18,0	0/0:31,0:31:78:0,78,707	1/1:2,14:16:16.85:416,17,0	1/1:1,17:18:51.12:567,51,0	1/1:5,17:22:45.13:520,45,0	1/1:0,11:11:24.07:277,24,0	0/0:11,0:11:27:0,27,244	0/0:29,0:29:84.04:0,84,769	0/0:12,0:12:33.02:0,33,302	1/1:7,18:25:48.14:554,48,0	1/1:4,27:31:78.23:899,78,0	1/1:3,35:38:93.23:1058,93,0	1/1:4,14:18:36.09:404,36,0
chr10	42291321	.	CATATATATAT	C	212.64	PASS	AB=1.000;AC=7;AF=0.167;AN=42;BaseQRankSum=1.789;DP=196;FS=0.000;HRun=0;HaplotypeScore=59.4388;InbreedingCoeff=0.3684;MQ=98.78;MQ0=4;MQRankSum=-2.653;QD=3.17;ReadPosRankSum=0.579;VQSLOD=0.9184;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,12:20:5.76:161,6,0	1/1:4,0:8:15.02:143,15,0	1/1:17,0:12:2.04:6,2,0	0/1:22,0:14:14.06:14,0,31	0/0:2,0:3:2.60:0,3,10	0/0:8,0:8:9:0,9,132	./.	0/0:14,0:14:26.69:0,27,676	0/0:5,0:5:5.99:0,6,50	0/0:3,0:3:6.02:0,6,208	0/0:7,0:7:3.01:0,3,103	0/0:4,0:4:9.03:0,9,374	0/0:9,0:9:9.03:0,9,301	0/0:2,0:2:6.02:0,6,251	0/0:7,0:7:6.49:0,6,274	./.	0/0:5,0:12:30.53:0,31,1008	0/0:12,0:12:25.44:0,25,830	0/0:4,0:4:3.01:0,3,120	./.	./.	./.	0/0:3,0:3:3.01:0,3,77	0/0:3,0:3:2.99:0,3,24	0/0:3,0:3:6.02:0,6,235	./.	./.	0/0:6,0:8:15.02:0,15,402
chr10	42291351	.	CATAT	C	198.75	PASS	AB=0.906;AC=8;AF=0.160;AN=50;BaseQRankSum=1.667;DP=157;FS=4.182;HRun=0;HaplotypeScore=38.6419;InbreedingCoeff=0.1092;MQ=61.57;MQ0=3;MQRankSum=-1.832;QD=5.37;ReadPosRankSum=0.141;VQSLOD=1.1647;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:21:7.79:0,8,230	1/1:4,0:4:5.29:14,5,0	./.	0/1:9,0:5:0.39:7,0,0	0/0:4,0:4:9.03:0,9,136	0/0:8,0:8:2.74:0,3,12	./.	0/0:19,0:20:46.40:0,46,834	0/0:1,0:1:3.01:0,3,49	0/1:2,3:5:88.83:102,0,89	0/0:2,4:6:3:0,3,25	0/0:5,0:5:8.99:0,9,172	0/0:2,0:3:8.66:0,9,92	0/0:6,0:6:6.91:0,7,122	0/0:3,0:3:6.48:0,6,78	0/0:1,0:1:3.01:0,3,49	0/0:19,0:18:45.15:0,45,921	0/1:14,0:14:75.13:99,0,75	0/0:2,0:2:6.02:0,6,129	0/0:1,0:1:3.01:0,3,46	0/0:1,0:1:3.01:0,3,49	./.	0/0:5,0:5:5.75:0,6,61	1/1:1,0:1:0.47:1,0,0	0/1:4,0:4:11.46:84,0,11	0/0:2,0:2:6.02:0,6,105	0/0:2,0:2:6.02:0,6,91	0/0:8,0:8:21.07:0,21,400
chr10	42294001	.	GCATA	G	4706.10	PASS	AB=0.911;AC=17;AF=0.315;AN=54;BaseQRankSum=12.016;DP=866;FS=0.409;HRun=0;HaplotypeScore=140.7525;InbreedingCoeff=0.3370;MQ=75.49;MQ0=1;MQRankSum=-0.110;QD=13.15;ReadPosRankSum=0.120;VQSLOD=4.5837;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:42.14:0,42,983	0/1:12,2:14:75.15:75,0,252	./.	0/0:23,0:22:3.01:0,3,30	0/0:30,0:29:60.21:0,60,1364	0/0:21,1:22:7.57:0,8,1154	0/0:17,0:17:30.10:0,30,606	0/0:32,0:32:12.04:0,12,258	1/1:21,28:49:63.21:979,63,0	1/1:29,33:63:99:1521,102,0	1/1:12,4:16:9.03:140,9,0	0/0:32,0:32:48.16:0,48,1103	0/0:42,1:43:31.68:0,32,1694	0/0:37,0:37:51.18:0,51,1185	1/1:23,33:57:90.19:1367,90,0	0/0:31,0:31:60.19:0,60,1315	0/0:15,0:15:18.06:0,18,424	0/1:6,3:9:25.85:118,0,26	0/1:24,1:25:31.55:32,0,268	0/0:33,0:33:16.62:0,17,1353	0/0:28,0:54:55.43:0,55,948	0/0:37,2:39:4.58:0,5,1028	0/1:20,1:21:13.48:13,0,673	0/1:20,1:21:16.52:17,0,578	1/1:15,14:30:26.68:382,27,0	0/1:38,2:40:23.96:24,0,1365	0/0:29,0:29:39.12:0,39,861	0/1:12,1:13:37.56:38,0,132
chr10	42294902	.	AT	A	4329.70	PASS	AB=0.913;AC=17;AF=0.304;AN=56;BaseQRankSum=13.528;DP=555;FS=6.009;HRun=9;HaplotypeScore=54.8825;InbreedingCoeff=0.9319;MQ=82.64;MQ0=0;MQRankSum=-1.979;QD=21.12;ReadPosRankSum=1.642;VQSLOD=5.6346;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:51.14:0,51,578	0/0:8,0:8:6.47:0,6,207	0/0:17,0:17:13.80:0,14,333	0/0:14,0:15:38.11:0,38,352	1/1:1,31:32:90.01:816,90,0	0/0:21,0:21:57.17:0,57,655	0/0:12,0:12:33.10:0,33,381	0/0:28,0:28:66.18:0,66,746	1/1:1,15:16:39.02:357,39,0	1/1:2,30:32:87.04:796,87,0	1/1:3,25:28:62.86:555,63,0	0/0:13,0:13:36.09:0,36,405	0/0:13,0:13:33.10:0,33,380	0/0:21,0:21:57.17:0,57,658	1/1:5,21:26:28.36:515,28,0	1/1:1,23:24:66.04:604,66,0	0/0:15,0:15:39.12:0,39,450	1/1:0,5:5:15.01:137,15,0	0/0:19,0:19:54.15:0,54,614	0/0:26,0:26:69.19:0,69,787	0/0:15,0:15:42.11:0,42,475	0/0:26,0:26:75.22:0,75,865	0/0:20,0:20:54.15:0,54,614	0/0:6,0:6:18.05:0,18,208	1/1:0,21:21:60.03:549,60,0	0/1:19,2:21:0.45:0,0,492	0/0:33,0:33:84.25:0,84,969	0/0:22,0:24:55.30:0,55,715
chr10	42295003	.	GTT	G	2281.55	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=8.536;DP=564;FS=1.461;HRun=12;HaplotypeScore=72.9538;InbreedingCoeff=0.8708;MQ=74.00;MQ0=0;MQRankSum=-0.496;QD=18.11;ReadPosRankSum=3.374;VQSLOD=2.9844;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,22:28:65.60:634,66,0	1/1:2,6:8:18.03:183,18,0	0/0:14,0:12:11.97:0,12,152	0/1:15,0:14:25.62:26,0,104	1/1:3,31:34:78.10:793,78,0	0/0:3,0:16:27.03:0,27,256	0/0:4,0:8:12.02:0,12,130	0/0:34,0:37:86.21:0,86,1129	1/1:6,16:22:42.05:427,42,0	0/0:24,0:24:57.02:0,57,819	0/0:22,0:25:59.15:0,59,773	0/0:17,0:18:50.64:0,51,700	0/0:22,0:24:71.72:0,72,1024	0/0:21,0:23:59.66:0,60,820	0/0:15,0:17:47.64:0,48,663	1/1:5,14:19:39.06:397,39,0	0/0:23,0:23:63.16:0,63,869	0/0:3,0:6:18.01:0,18,197	0/0:22,0:25:56.52:0,57,710	0/0:32,0:34:84.24:0,84,1164	0/0:11,0:13:35.08:0,35,447	0/0:15,0:15:33.11:0,33,491	0/0:16,0:19:45.15:0,45,654	0/0:11,0:12:32.60:0,33,456	0/0:23,0:26:63.20:0,63,900	0/0:15,0:15:39.11:0,39,538	0/0:29,0:29:69.19:0,69,951	0/0:12,0:14:32.57:0,33,516
chr10	42295257	.	T	TACAC	5313.32	PASS	AB=0.944;AC=21;AF=0.375;AN=56;BaseQRankSum=11.177;DP=561;FS=2.705;HRun=0;HaplotypeScore=105.9586;InbreedingCoeff=0.8800;MQ=64.60;MQ0=2;MQRankSum=-6.579;QD=27.25;ReadPosRankSum=0.364;VQSLOD=4.6287;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,1:29:19.87:342,20,0	1/1:1,0:10:13.45:212,13,0	0/0:35,0:27:47.90:0,48,576	0/0:33,0:28:12.46:0,12,525	1/1:11,0:11:12.04:208,12,0	0/0:26,0:26:72.23:0,72,1140	0/0:27,0:27:75.22:0,75,1167	0/0:26,0:26:66.18:0,66,923	1/1:21,0:21:27.68:516,28,0	1/1:6,19:25:54.10:1062,54,0	1/1:2,13:18:21.07:476,21,0	0/0:21,0:21:51.16:0,51,861	0/0:16,0:16:36.09:0,36,516	0/0:20,0:20:51.17:0,51,850	1/1:4,21:25:52.06:1299,52,0	1/1:10,0:10:6.70:176,7,0	0/0:16,0:16:42.14:0,42,685	1/1:3,3:7:6.02:153,6,0	0/0:17,0:17:27.07:0,27,401	0/0:15,0:16:33.11:0,33,538	0/0:23,0:23:57.19:0,57,885	0/0:21,0:21:59.87:0,60,915	0/0:16,0:16:36.12:0,36,594	0/0:25,0:25:69.22:0,69,1147	1/1:4,17:22:33.11:841,33,0	0/1:16,1:17:27.99:28,0,643	0/0:20,0:19:48.16:0,48,775	0/0:7,0:7:21.07:0,21,368
chr10	42295264	.	A	ACACACAC	4331.21	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=12.218;DP=563;FS=0.922;HRun=0;HaplotypeScore=138.9078;InbreedingCoeff=0.5622;MQ=60.60;MQ0=5;MQRankSum=-5.419;QD=23.54;ReadPosRankSum=3.417;VQSLOD=4.6499;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:34,0:34:49.87:393,0,50	0/1:10,0:10:20.77:236,0,21	0/0:37,0:24:59.42:0,59,767	0/0:34,0:27:37.19:0,37,799	1/1:3,6:9:12.04:332,12,0	0/0:26,0:26:75.25:0,75,1595	0/0:27,0:27:78.26:0,78,1622	0/0:29,0:28:78.24:0,78,1323	1/1:3,16:26:30.10:981,30,0	0/1:22,0:22:35.10:690,0,35	1/1:17,0:17:21.06:269,21,0	0/0:18,0:18:54.18:0,54,1342	0/0:14,0:14:39.13:0,39,750	0/0:19,0:19:54.18:0,54,1213	1/1:23,0:24:52.04:591,52,0	1/1:0,11:11:9.03:358,9,0	0/0:16,0:16:45.15:0,45,981	0/1:7,0:7:2.83:139,0,3	0/0:16,0:16:42.11:0,42,688	0/0:17,0:17:42.14:0,42,857	0/0:22,0:22:60.19:0,60,1141	0/0:19,0:20:60.18:0,60,1207	0/0:15,0:15:39.13:0,39,861	0/0:23,0:23:69.24:0,69,1663	0/1:24,0:24:68.16:341,0,68	0/0:20,0:20:19.62:0,20,886	0/0:17,0:17:51.17:0,51,1115	0/0:8,0:8:21.07:0,21,543
chr10	42302649	.	C	CA	968.20	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=6.467;DP=584;FS=4.502;HRun=7;HaplotypeScore=73.2287;InbreedingCoeff=0.9426;MQ=53.60;MQ0=17;MQRankSum=-0.713;QD=14.67;ReadPosRankSum=2.408;VQSLOD=3.5530;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:22:42.06:0,42,405	0/0:6,0:6:18.03:0,18,172	0/0:18,0:9:14.92:0,15,132	0/0:18,0:5:15.02:0,15,143	1/1:4,33:29:51.14:602,51,0	0/0:18,0:18:48.08:0,48,463	0/0:4,0:4:6.01:0,6,58	0/0:32,0:26:60.04:0,60,565	1/1:2,16:17:24.07:290,24,0	0/0:36,0:28:81.12:0,81,775	0/0:26,0:21:29.78:0,30,274	0/0:13,0:13:33:0,33,309	0/0:17,0:17:51.08:0,51,492	0/0:13,0:13:36.04:0,36,341	0/0:12,0:12:18.02:0,18,174	1/1:0,11:11:18.06:217,18,0	0/0:23,0:23:60.10:0,60,579	0/0:17,0:15:23.92:0,24,206	0/0:21,0:15:39.05:0,39,372	0/0:28,0:29:77.16:0,77,730	0/0:16,0:16:36.05:0,36,348	0/0:24,0:24:56.90:0,57,527	0/0:27,0:27:74.99:0,75,703	0/0:16,0:16:48.08:0,48,463	0/0:19,0:16:29.35:0,29,288	0/0:24,0:24:69.09:0,69,660	0/0:43,0:43:99:0,123,1160	0/0:21,0:21:57.09:0,57,550
chr10	42304501	.	G	GGGGGAGGGTGGTAGT	1171.72	PASS	AC=14;AF=0.269;AN=52;BaseQRankSum=2.581;DP=362;FS=23.917;HRun=0;HaplotypeScore=124.1409;InbreedingCoeff=0.7326;MQ=54.95;MQ0=12;MQRankSum=-3.592;QD=50.94;ReadPosRankSum=-2.025;VQSLOD=0.8948;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:4,2:4:6.02:435,6,0	1/1:2,0:2:3:54,3,0	0/0:15,0:9:18.03:0,18,712	0/0:13,0:8:14.26:0,14,375	./.	0/0:21,0:20:45.11:0,45,1605	0/0:13,0:12:30.06:0,30,1048	0/0:20,0:16:36.12:0,36,1553	0/0:1,2:1:0:0,0,0	1/1:3,0:3:3.42:153,3,0	1/1:2,1:5:2.91:218,3,0	0/0:15,0:15:33.07:0,33,1321	0/0:18,0:18:42.14:0,42,1738	0/0:21,0:19:54.18:0,54,2254	1/1:3,0:2:2.98:65,3,0	./.	0/0:35,0:34:84.28:0,84,3326	1/1:0,1:1:3.01:219,3,0	0/0:18,0:11:21.07:0,21,899	0/0:20,0:19:51.18:0,51,2074	0/0:34,0:33:77.99:0,78,3054	0/0:16,0:15:39.07:0,39,1364	0/0:10,0:10:27.05:0,27,914	0/0:19,0:19:51.16:0,51,2007	1/1:1,1:2:3.01:173,3,0	0/0:16,0:15:36.11:0,36,1411	0/0:18,0:18:48.13:0,48,1550	0/0:8,0:8:21.06:0,21,783
chr10	42304959	.	C	CGT	728.09	PASS	AB=0.894;AC=25;AF=0.543;AN=46;BaseQRankSum=-5.867;DP=539;FS=7.683;HRun=0;HaplotypeScore=112.7895;InbreedingCoeff=0.4774;MQ=65.69;MQ0=11;MQRankSum=4.706;QD=2.60;ReadPosRankSum=-2.584;VQSLOD=1.1401;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:38:5.67:0,6,28	0/0:7,0:7:5.68:0,6,28	./.	./.	0/0:16,0:16:2.84:0,3,14	1/1:19,0:19:9:81,9,0	1/1:21,0:23:3:26,3,0	1/1:25,0:24:1.77:4,2,0	./.	0/0:33,0:32:14.20:0,14,70	0/0:15,0:15:11.36:0,11,56	1/1:8,0:15:8.87:93,9,0	1/1:9,1:15:6:52,6,0	1/1:8,5:13:3.01:44,3,0	0/0:21,0:21:11.36:0,11,55	0/0:21,0:21:11.36:0,11,56	1/1:13,7:22:12.04:164,12,0	./.	0/1:17,0:15:0:0,0,0	1/1:15,2:17:6.02:88,6,0	0/1:34,0:34:0:0,0,0	1/1:10,3:14:6.02:88,6,0	0/1:11,0:15:0:0,0,0	1/1:13,2:20:12.02:140,12,0	0/0:11,0:11:11.36:0,11,56	./.	0/1:16,1:19:22.79:61,0,23	0/1:7,2:9:25.79:38,0,26
chr10	42304989	.	TGTGTGTGTGTGTGTGTGTGTGG	T	3920.93	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=10.530;DP=520;FS=17.471;HRun=0;HaplotypeScore=265.7131;InbreedingCoeff=0.4945;MQ=50.91;MQ0=19;MQRankSum=-4.047;QD=24.97;ReadPosRankSum=1.435;VQSLOD=1.0363;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:43,0:41:46.11:46,0,1033	0/1:8,0:8:40.96:41,0,181	0/0:21,0:11:26.17:0,26,960	0/0:25,0:13:36.32:0,36,779	0/1:27,0:27:73.57:74,0,562	0/0:18,0:17:31.25:0,31,1235	0/0:23,0:21:43.92:0,44,1579	0/0:17,0:15:41.95:0,42,2056	0/0:12,0:12:21.07:0,21,567	1/1:15,5:18:47.79:1185,48,0	1/1:8,4:12:21.02:811,21,0	0/0:17,0:17:23.76:0,24,1479	0/0:16,0:16:28.04:0,28,1713	0/0:14,0:13:21.04:0,21,1390	1/1:11,3:14:24.04:881,24,0	0/1:14,0:14:62.25:62,0,489	0/0:25,0:25:44.48:0,44,2520	0/1:6,0:6:25.56:26,0,40	0/0:12,0:11:30.25:0,30,1230	0/0:18,0:17:48.16:0,48,3178	0/0:30,0:30:57.94:0,58,3677	0/0:24,0:24:51.72:0,52,2874	0/0:14,0:14:22.97:0,23,1194	0/0:25,0:21:42.13:0,42,3466	1/1:10,3:12:21.04:797,21,0	0/0:20,0:19:38.17:0,38,3071	0/0:18,0:18:48.15:0,48,2946	0/0:13,0:13:36.11:0,36,2278
chr10	42304997	.	TGTGTGTGTGTGTGG	T	4623.94	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=12.539;DP=501;FS=6.101;HRun=0;HaplotypeScore=203.7347;InbreedingCoeff=0.9679;MQ=59.35;MQ0=16;MQRankSum=-2.758;QD=32.56;ReadPosRankSum=2.437;VQSLOD=3.1715;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:26,3:28:31.80:622,32,0	1/1:5,1:6:11.32:286,11,0	0/0:31,0:20:38.83:0,39,535	0/0:30,0:20:36.77:0,37,492	1/1:20,2:22:39.44:489,39,0	0/0:16,0:15:26.96:0,27,588	0/0:22,0:20:39.84:0,40,750	0/0:15,0:13:38.72:0,39,1037	1/1:12,0:12:17.94:144,18,0	1/1:20,0:18:53.30:832,53,0	1/1:13,0:13:21.02:506,21,0	0/0:19,0:19:28.40:0,28,883	0/0:14,0:14:22:0,22,886	0/0:15,0:14:24.04:0,24,896	1/1:13,0:13:21.03:512,21,0	1/1:7,3:10:27.05:708,27,0	0/0:20,0:20:33.06:0,33,1405	1/1:5,0:5:4.26:36,4,0	0/0:11,0:10:26.28:0,26,646	0/0:20,0:19:54.04:0,54,1672	0/0:28,0:28:54.08:0,54,2174	0/0:23,0:23:52.16:0,52,1672	0/0:19,0:19:38.16:0,38,684	0/0:26,0:23:45.09:0,45,2127	1/1:12,0:11:18.04:487,18,0	0/0:20,0:19:35.13:0,35,1575	0/0:15,0:15:39.09:0,39,1515	0/0:14,0:14:39.06:0,39,1313
chr10	42305015	.	CAG	C	4676.53	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=13.705;DP=495;FS=37.067;HRun=0;HaplotypeScore=126.3163;InbreedingCoeff=0.9636;MQ=85.73;MQ0=4;MQRankSum=-7.539;QD=29.41;ReadPosRankSum=3.922;VQSLOD=3.5963;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,22:23:44.59:434,45,0	1/1:0,9:9:14.97:198,15,0	0/0:43,0:34:93.69:0,94,1665	0/0:45,0:36:95.97:0,96,1637	1/1:0,26:26:45.08:656,45,0	0/0:9,0:9:24.08:0,24,462	0/0:18,0:17:48.16:0,48,893	0/0:22,0:21:60.21:0,60,1154	1/1:1,10:11:29.90:369,30,0	1/1:1,26:27:81.25:1174,81,0	1/1:0,16:16:30.06:425,30,0	0/0:15,0:15:33.10:0,33,578	0/0:13,0:13:30.09:0,30,548	0/0:17,0:17:39.13:0,39,744	1/1:0,17:17:38.86:478,39,0	1/1:0,11:11:27.02:377,27,0	0/0:14,0:14:30.10:0,30,578	1/1:1,4:5:12.01:159,12,0	0/0:9,0:8:24.08:0,24,433	0/0:18,0:17:51.09:0,51,944	0/0:20,0:20:48.16:0,48,918	0/0:17,0:17:42.96:0,43,800	0/0:17,0:17:44.38:0,44,867	0/0:15,0:15:36.12:0,36,679	1/1:0,14:14:35.82:406,36,0	0/0:15,1:16:2.40:0,2,813	0/0:15,0:15:42.11:0,42,761	0/0:13,0:13:36.12:0,36,695
chr10	42305854	.	A	ATTT	3490.90	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=11.514;DP=533;FS=24.705;HRun=8;HaplotypeScore=89.2476;InbreedingCoeff=0.9929;MQ=81.00;MQ0=0;MQRankSum=-2.519;QD=20.66;ReadPosRankSum=2.400;VQSLOD=0.1762;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:25:48.11:730,48,0	1/1:8,0:8:21.07:321,21,0	0/0:17,0:16:15.33:0,15,404	0/0:27,0:26:48.51:0,49,564	1/1:1,11:13:33.05:571,33,0	0/0:17,0:17:45.13:0,45,590	0/0:18,0:18:45.07:0,45,559	0/0:27,0:27:63.14:0,63,784	1/1:3,16:19:42.14:843,42,0	1/1:17,0:17:20.36:56,20,0	1/1:24,0:24:46.61:189,47,0	0/0:17,0:17:45.12:0,45,576	0/0:20,0:20:57.17:0,57,733	0/0:21,0:21:57.15:0,57,733	1/1:16,0:16:33.98:113,34,0	1/1:2,16:19:24.08:485,24,0	0/0:21,0:21:57.14:0,57,731	1/1:18,0:18:32.49:115,32,0	0/0:24,0:24:51.05:0,51,617	0/0:27,0:27:78.18:0,78,970	0/0:22,0:22:60.15:0,60,763	0/0:21,0:21:60.19:0,60,788	0/0:25,0:25:66.19:0,66,851	0/0:6,0:6:15.05:0,15,197	1/1:10,0:10:20.13:66,20,0	0/0:20,0:20:51.36:0,51,663	0/0:23,0:23:60.17:0,60,788	0/0:11,0:11:30.09:0,30,394
chr10	42305862	.	T	TTG	5145.83	PASS	AB=1.000;AC=18;AF=0.321;AN=56;BaseQRankSum=5.611;DP=538;FS=10.000;HRun=0;HaplotypeScore=73.9915;InbreedingCoeff=0.8082;MQ=79.58;MQ0=0;MQRankSum=-2.886;QD=30.09;ReadPosRankSum=3.445;VQSLOD=6.2980;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,0:23:51.09:599,51,0	1/1:0,0:10:21.07:255,21,0	0/0:14,0:13:34.57:0,35,500	0/0:26,0:27:67.47:0,67,760	0/1:13,0:13:18.53:19,0,46	0/0:16,0:16:48.14:0,48,682	0/0:17,0:17:51.15:0,51,707	0/0:27,0:27:75.22:0,75,1028	0/1:19,0:19:25.67:26,0,26	1/1:0,19:19:57.16:974,57,0	1/1:0,21:23:60.19:1104,60,0	0/0:20,0:20:60.10:0,60,760	0/0:20,0:20:60.19:0,60,859	0/0:23,0:23:66.18:0,66,908	1/1:0,18:18:45.15:853,45,0	1/1:15,0:15:5.27:9,5,0	0/0:21,0:21:60.18:0,60,857	1/1:1,16:18:42.14:795,42,0	0/0:20,0:20:60.15:0,60,812	0/0:28,0:28:84.24:0,84,1167	0/0:21,0:21:63.20:0,63,896	0/0:22,0:22:63.19:0,63,900	0/0:28,0:28:75.22:0,75,1042	0/0:7,0:7:18.04:0,18,243	1/1:1,11:13:27.09:512,27,0	0/0:21,1:22:9.28:0,9,812	0/0:22,0:22:63.20:0,63,901	0/0:11,0:11:33.08:0,33,461
chr10	42306059	.	AT	A	4770.06	PASS	AB=0.556;AC=19;AF=0.339;AN=56;BaseQRankSum=13.576;DP=565;FS=1.108;HRun=9;HaplotypeScore=53.8658;InbreedingCoeff=0.9198;MQ=87.70;MQ0=0;MQRankSum=-1.405;QD=22.61;ReadPosRankSum=2.390;VQSLOD=5.6779;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,34:39:90.03:824,90,0	1/1:0,9:9:27.01:247,27,0	0/0:16,0:16:42.10:0,42,466	0/0:21,2:22:38.19:0,38,474	1/1:2,26:28:75.03:686,75,0	0/0:23,0:23:66.16:0,66,748	0/0:21,0:21:51.14:0,51,579	0/0:29,0:29:66.20:0,66,762	1/1:2,17:19:45.01:412,45,0	1/1:1,22:23:63.02:572,63,0	1/1:4,25:29:63.01:576,63,0	0/0:17,0:17:51.15:0,51,589	0/0:15,0:15:45.12:0,45,511	0/0:19,0:19:51.15:0,51,589	1/1:2,15:17:45.02:412,45,0	1/1:2,25:27:66.03:604,66,0	0/0:20,0:20:54.16:0,54,623	0/1:2,8:10:30.06:190,0,30	0/0:27,0:27:72.21:0,72,824	0/0:22,0:22:63.18:0,63,719	0/0:20,0:20:48.13:0,48,543	0/0:18,0:18:51.15:0,51,587	0/0:17,0:17:48.13:0,48,546	0/0:13,0:13:39.12:0,39,450	1/1:0,10:10:27.01:247,27,0	0/0:21,0:22:63.01:0,63,698	0/0:24,0:23:57.17:0,57,657	0/0:8,0:8:24.07:0,24,277
chr10	42306430	.	AACCTTTTTCTCCCAGGCAACATG	A	1493.88	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.114;DP=456;FS=2.956;HRun=0;HaplotypeScore=262.3148;InbreedingCoeff=0.9388;MQ=96.68;MQ0=0;MQRankSum=-4.930;QD=124.49;ReadPosRankSum=1.055;VQSLOD=3.4611;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,10:10:21.07:1213,21,0	1/1:0,2:2:6.02:391,6,0	0/0:28,0:28:84.26:0,84,5267	0/0:19,0:19:56.56:0,57,3346	0/0:22,0:22:66.21:0,66,5526	0/0:20,0:20:60.14:0,60,4574	0/0:14,0:14:42.14:0,42,3421	0/0:20,0:20:57.17:0,57,3867	0/0:16,0:16:48.16:0,48,4423	0/0:18,0:18:54.18:0,54,5080	0/0:8,0:8:24.07:0,24,1982	0/0:14,0:14:42.14:0,42,4157	0/0:14,0:14:42.07:0,42,3773	0/0:13,0:13:39.13:0,39,3784	0/0:23,0:23:69.23:0,69,6254	0/0:15,0:15:45.15:0,45,4436	0/0:17,0:17:51.14:0,51,3657	0/0:16,0:16:48.16:0,48,4666	0/0:14,0:14:42.14:0,42,3268	0/0:21,0:21:63.20:0,63,5898	0/0:15,0:15:41.71:0,42,3916	0/0:14,0:14:42.10:0,42,3939	0/0:29,0:29:87.28:0,87,7348	0/0:12,0:12:36.12:0,36,3468	0/0:11,0:11:33.11:0,33,3417	0/0:22,0:22:66.20:0,66,6388	0/0:21,0:20:63.18:0,63,5976	0/0:8,0:8:24.08:0,24,2670
chr10	42306992	.	A	AAC	1639.20	PASS	AB=0.809;AC=25;AF=0.463;AN=54;BaseQRankSum=0.042;DP=488;FS=6.337;HRun=0;HaplotypeScore=99.2778;InbreedingCoeff=0.4924;MQ=63.86;MQ0=5;MQRankSum=-2.816;QD=6.66;ReadPosRankSum=-4.399;VQSLOD=1.5830;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:22,3:25:99:162,0,106	1/1:6,0:9:8.95:71,9,0	0/0:21,0:19:3.01:0,3,32	./.	0/0:10,0:18:14.20:0,14,70	0/0:22,0:26:32.58:0,33,303	0/0:16,0:17:23.60:0,24,227	1/1:28,0:28:11.54:134,12,0	0/0:12,0:20:23.80:0,24,123	1/1:18,0:18:18.47:190,18,0	1/1:17,1:19:3:26,3,0	0/0:14,0:16:23.89:0,24,246	0/0:11,0:12:11.53:0,12,105	0/1:9,1:11:24.30:24,0,151	1/1:10,1:15:6:52,6,0	0/0:2,0:14:28.41:0,28,140	0/0:9,0:15:17.04:0,17,84	1/1:13,0:13:12.63:107,13,0	0/1:9,6:14:12.10:244,0,12	1/1:15,12:27:21.05:316,21,0	0/1:11,6:18:50.72:121,0,51	0/0:18,0:22:32.55:0,33,295	0/0:17,0:16:9.02:0,9,99	0/0:19,0:21:29.89:0,30,303	1/1:17,0:17:6.02:81,6,0	1/1:9,2:11:6.91:89,7,0	1/1:5,5:12:9.03:136,9,0	0/1:6,2:8:54.30:78,0,54
chr10	42307870	.	AT	A	656.19	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.240;DP=633;FS=3.067;HRun=2;HaplotypeScore=66.4781;InbreedingCoeff=0.9951;MQ=88.73;MQ0=0;MQRankSum=-5.670;QD=26.25;ReadPosRankSum=-1.272;VQSLOD=3.0003;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,13:13:33.11:428,33,0	1/1:2,10:12:27.09:350,27,0	0/0:30,0:30:84.28:0,84,1237	0/0:16,0:16:48.16:0,48,719	0/0:33,0:33:93.30:0,93,1374	0/0:26,0:26:78.26:0,78,1169	0/0:13,0:13:39.13:0,39,583	0/0:22,0:22:60.18:0,60,846	0/0:28,0:28:81.25:0,81,1176	0/0:37,0:37:99:0,111,1623	0/0:26,0:26:78.26:0,78,1166	0/0:20,0:20:60.20:0,60,899	0/0:27,0:27:81.27:0,81,1205	0/0:24,0:24:72.24:0,72,1079	0/0:29,0:29:87.29:0,87,1303	0/0:15,0:15:45.15:0,45,675	0/0:17,0:17:51.17:0,51,763	0/0:10,0:10:21.07:0,21,309	0/0:21,0:21:60.14:0,60,873	0/0:24,0:24:72.22:0,72,1057	0/0:15,0:15:45.15:0,45,671	0/0:24,0:24:72.24:0,72,1060	0/0:29,0:29:87.29:0,87,1286	0/0:27,0:27:81.26:0,81,1192	0/0:22,0:22:66.22:0,66,989	0/0:24,0:24:72.24:0,72,1079	0/0:42,0:42:99:0,123,1842	0/0:7,0:7:21.07:0,21,311
chr10	42307886	.	CTCAGGCAGACTGTGA	C	1522	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.881;DP=607;FS=0.000;HRun=0;HaplotypeScore=243.9312;InbreedingCoeff=0.9669;MQ=88.59;MQ0=0;MQRankSum=-5.891;QD=80.11;ReadPosRankSum=0.369;VQSLOD=3.1333;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,4:9:12.04:547,12,0	1/1:2,8:10:24.08:1091,24,0	0/0:27,0:27:78.27:0,78,4541	0/0:22,0:22:58.04:0,58,2985	0/0:25,0:25:75.26:0,75,5141	0/0:28,0:28:78.25:0,78,5205	0/0:15,0:15:42.14:0,42,2954	0/0:21,0:21:60.20:0,60,3794	0/0:27,0:27:78.27:0,78,5622	0/0:35,0:35:99:0,105,7605	0/0:25,0:25:72.25:0,72,4676	0/0:21,0:21:60.21:0,60,4386	0/0:27,0:27:81.26:0,81,5237	0/0:24,0:24:72.25:0,72,4973	0/0:30,0:30:90.31:0,90,6654	0/0:16,0:16:48.16:0,48,3363	0/0:13,0:13:39.13:0,39,2594	0/0:10,0:10:30.10:0,30,1896	0/0:23,0:23:69.24:0,69,4869	0/0:23,0:23:69.24:0,69,5026	0/0:19,0:19:57.20:0,57,3760	0/0:22,0:22:66.23:0,66,4834	0/0:26,0:26:75.26:0,75,5029	0/0:25,0:25:72.25:0,72,4963	0/0:18,0:18:54.19:0,54,3676	0/0:23,0:23:69.24:0,69,4893	0/0:39,0:39:99:0,114,8214	0/0:4,0:4:12.04:0,12,811
chr10	42307996	.	C	CCTAACTTAAGTTCTTT	3709.14	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-1.040;DP=629;FS=0.000;HRun=0;HaplotypeScore=334.4620;InbreedingCoeff=0.9897;MQ=88.61;MQ0=0;MQRankSum=-7.532;QD=168.60;ReadPosRankSum=-1.534;VQSLOD=2.5503;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,7:17:45.10:2720,45,0	1/1:3,2:5:15.05:989,15,0	0/0:19,0:19:57.15:0,57,1893	0/0:27,0:27:69.19:0,69,2409	0/0:30,0:30:90.26:0,90,3566	0/0:30,0:30:84.24:0,84,3113	0/0:19,0:19:51.16:0,51,2051	0/0:36,0:36:99:0,99,3805	0/0:24,0:24:60.18:0,60,2542	0/0:27,0:27:75.26:0,75,3226	0/0:18,0:18:54.14:0,54,2192	0/0:18,0:18:51.16:0,51,2143	0/0:27,0:27:81.28:0,81,3633	0/0:25,0:25:72.20:0,72,2846	0/0:27,0:27:72.20:0,72,2993	0/0:16,0:16:45.15:0,45,2097	0/0:25,0:25:69.21:0,69,2729	0/0:17,0:17:45.15:0,45,1893	0/0:28,0:28:78.22:0,78,2979	0/0:32,0:32:84.29:0,84,3700	0/0:32,0:32:87.30:0,87,3833	0/0:19,0:19:54.19:0,54,2500	0/0:21,0:21:60.21:0,60,2778	0/0:25,0:25:72.25:0,72,3194	0/0:15,0:15:45.15:0,45,2027	0/0:19,0:19:57.19:0,57,2385	0/0:24,0:24:72.25:0,72,3067	0/0:7,0:7:21.07:0,21,948
chr10	42308933	.	T	TTCTC	288.31	PASS	AB=1.000;AC=5;AF=0.104;AN=48;BaseQRankSum=5.750;DP=505;FS=23.398;HRun=0;HaplotypeScore=112.8116;InbreedingCoeff=0.4344;MQ=83.40;MQ0=9;MQRankSum=-2.178;QD=5.77;ReadPosRankSum=-1.080;VQSLOD=0.8722;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:13,0:13:37.10:55,0,37	0/1:8,0:7:4.54:106,0,5	0/0:42,0:27:22.16:0,22,289	0/0:61,0:34:28:0,28,428	./.	0/0:24,0:24:45.57:0,46,637	0/0:15,0:15:39.04:0,39,490	0/0:20,0:20:39.05:0,39,455	./.	1/1:21,0:21:7.33:150,7,0	./.	0/0:12,0:12:33.08:0,33,475	0/0:13,0:13:33.09:0,33,486	0/0:13,0:13:27.07:0,27,419	./.	0/0:7,13:20:0.47:0,0,1	0/0:4,0:11:17.99:0,18,159	0/1:8,0:8:3.96:89,0,4	0/0:13,0:12:23.95:0,24,269	0/0:18,0:18:29.92:0,30,324	0/0:15,0:15:27.94:0,28,359	0/0:14,0:14:33.04:0,33,460	0/0:25,0:26:69.21:0,69,1079	0/0:14,0:14:33.06:0,33,447	0/0:13,0:13:2.68:0,3,11	0/0:18,0:18:33.07:0,33,489	0/0:13,0:13:27.06:0,27,353	0/0:22,0:22:42.04:0,42,513
chr10	42308947	.	C	CTCTCTATCTATCTA	2065.81	PASS	AB=1.000;AC=12;AF=0.231;AN=52;BaseQRankSum=3.603;DP=545;FS=3.277;HRun=0;HaplotypeScore=186.7110;InbreedingCoeff=0.6250;MQ=69.20;MQ0=16;MQRankSum=-1.754;QD=19.31;ReadPosRankSum=-3.230;VQSLOD=2.2390;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:13,0:12:32.57:33,0,275	0/1:10,0:9:16.54:17,0,93	0/0:51,0:22:44.55:0,45,652	0/0:73,0:33:33.75:0,34,844	./.	0/0:24,0:24:56.56:0,57,1745	0/0:16,0:16:42.14:0,42,1067	0/0:24,0:24:72.16:0,72,1484	./.	1/1:2,0:23:54.15:1555,54,0	1/1:4,7:18:0.91:2,1,0	0/0:12,0:12:36.12:0,36,1169	0/0:13,0:13:36.12:0,36,1090	0/0:16,0:16:42.13:0,42,1279	1/1:3,1:20:6.02:94,6,0	0/0:18,0:18:7.33:0,7,51	0/0:13,0:14:4.07:0,4,469	1/1:2,0:5:9.03:466,9,0	0/0:11,0:10:29.99:0,30,688	0/0:18,0:18:30.10:0,30,662	0/0:14,0:14:30.10:0,30,835	0/0:15,0:15:39.11:0,39,1171	0/0:25,0:25:72.25:0,72,2666	0/0:17,0:18:42.13:0,42,1172	1/1:3,0:18:5.99:50,6,0	0/0:16,0:16:37.69:0,38,1142	0/0:12,0:12:30.07:0,30,733	0/0:16,0:15:42.14:0,42,1068
chr10	42308978	.	T	TCTCACACACA	2554.17	PASS	AB=0.989;AC=20;AF=0.370;AN=54;BaseQRankSum=2.614;DP=527;FS=5.620;HRun=0;HaplotypeScore=158.9969;InbreedingCoeff=0.2427;MQ=49.56;MQ0=28;MQRankSum=-4.151;QD=10.51;ReadPosRankSum=-5.276;VQSLOD=0.5260;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:18,0:17:7.74:109,0,8	1/1:8,0:7:10.12:60,10,0	0/0:40,0:8:20.60:0,21,185	0/1:43,0:8:9.16:9,0,89	./.	0/0:23,0:23:47.62:0,48,1029	0/0:14,0:12:24.01:0,24,341	0/1:26,0:25:99:385,0,236	1/1:12,0:12:2.82:100,3,0	0/1:18,0:18:24.44:24,0,213	0/0:25,0:24:23.02:0,23,354	0/0:13,0:13:33.03:0,33,551	0/0:10,0:11:29.94:0,30,565	0/0:18,0:17:45.04:0,45,852	0/0:17,0:20:17.97:0,18,237	1/1:13,0:13:1:165,1,0	0/1:22,0:22:7.87:499,0,8	0/0:11,0:11:3.92:0,4,225	1/1:15,0:12:25.75:341,26,0	0/0:6,10:23:2.95:0,3,24	1/1:16,0:15:2.36:373,2,0	0/0:23,0:22:54.06:0,54,1062	0/0:28,0:29:67.94:0,68,1227	0/0:24,0:23:51.03:0,51,966	0/1:18,0:19:26.95:27,0,144	0/1:16,0:15:99:246,0,132	1/1:9,0:10:19.97:240,20,0	0/1:6,0:6:12.53:147,0,13
chr10	42309326	.	CATAGT	C	5238.68	PASS	AB=0.941;AC=11;AF=0.196;AN=56;BaseQRankSum=10.544;DP=494;FS=0.000;HRun=0;HaplotypeScore=96.7518;InbreedingCoeff=0.8857;MQ=87.28;MQ0=0;MQRankSum=-8.035;QD=48.51;ReadPosRankSum=3.320;VQSLOD=5.0220;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:51.18:0,51,1551	0/0:9,0:9:24.08:0,24,742	0/0:14,0:14:36.11:0,36,975	0/0:22,0:22:56.58:0,57,1334	0/0:19,0:19:51.18:0,51,1559	0/0:10,0:10:27.09:0,27,833	0/0:22,0:22:66.21:0,66,1921	0/0:22,0:22:63.21:0,63,1865	0/0:17,0:17:48.16:0,48,1496	1/1:2,26:28:78.27:1633,78,0	1/1:3,9:12:33.11:670,33,0	0/0:13,0:13:39.13:0,39,1207	0/0:25,0:25:75.26:0,75,2340	0/0:19,0:19:51.16:0,51,1522	1/1:0,19:19:54.14:1107,54,0	0/0:16,0:16:48.16:0,48,1446	0/0:24,0:24:66.23:0,66,2065	1/1:1,9:10:27.05:532,27,0	0/0:17,0:17:45.15:0,45,1361	0/0:18,0:17:48.16:0,48,1455	0/0:14,0:14:42.14:0,42,1306	0/0:14,0:14:42.14:0,42,1315	0/0:17,0:17:51.18:0,51,1542	0/0:15,0:15:42.10:0,42,1241	1/1:1,22:23:60.21:1279,60,0	0/1:15,1:16:18.73:19,0,1237	0/0:32,0:32:87.30:0,87,2680	0/0:6,0:6:18.06:0,18,423
chr10	42309398	.	T	TA	11717.27	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-5.379;DP=597;FS=9.624;HRun=10;HaplotypeScore=77.1072;InbreedingCoeff=0.8908;MQ=80.27;MQ0=0;MQRankSum=-5.432;QD=20.85;ReadPosRankSum=3.712;VQSLOD=5.4628;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,1:26:44.85:235,45,0	1/1:1,0:11:10.02:109,10,0	0/0:21,0:21:34.76:0,35,261	0/0:14,0:14:29.73:0,30,233	1/1:9,36:45:6.76:818,7,0	1/1:1,16:17:39.10:416,39,0	1/1:5,20:25:32.50:551,32,0	1/1:6,21:27:60.06:595,60,0	1/1:3,18:21:20.47:423,20,0	1/1:14,23:37:78.18:819,78,0	1/1:1,21:23:47.99:492,48,0	1/1:4,10:14:11.04:305,11,0	1/1:5,17:22:39.09:416,39,0	1/1:2,15:17:39.10:414,39,0	1/1:5,16:21:51.06:528,51,0	1/1:3,13:16:40.65:420,41,0	1/1:4,2:29:59.96:317,60,0	1/1:3,7:10:21.05:224,21,0	1/1:4,13:18:16.64:341,17,0	1/1:5,21:26:11.58:501,12,0	1/1:2,11:13:27.07:288,27,0	1/1:3,17:20:42.07:436,42,0	1/1:2,19:22:54.36:543,54,0	1/1:0,11:11:33.08:352,33,0	1/1:6,16:22:57.12:591,57,0	1/1:3,24:27:60.13:631,60,0	1/1:5,19:24:29.49:519,29,0	1/1:2,15:17:42.02:433,42,0
chr10	42310336	.	C	CT	918.10	PASS	AB=0.976;AC=10;AF=0.192;AN=52;BaseQRankSum=5.231;DP=427;FS=7.286;HRun=9;HaplotypeScore=54.4618;InbreedingCoeff=0.6093;MQ=71.96;MQ0=2;MQRankSum=0.190;QD=9.56;ReadPosRankSum=0.450;VQSLOD=1.5181;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:17:0.47:1,0,0	./.	0/0:15,0:9:17.70:0,18,140	0/0:25,0:15:12.20:0,12,142	1/1:11,15:26:49.79:614,50,0	0/0:16,0:16:38.97:0,39,336	0/0:5,0:5:9:0,9,78	0/0:38,0:38:95.92:0,96,821	1/1:2,10:12:27.07:298,27,0	0/0:12,0:12:3.58:0,4,76	0/1:19,1:20:11.57:12,0,155	0/0:13,0:13:32.99:0,33,287	0/0:8,0:8:17.98:0,18,156	0/0:11,0:11:29.99:0,30,260	0/0:14,0:14:4.44:0,4,90	1/1:1,4:5:12.03:132,12,0	0/0:21,0:21:59.95:0,60,513	0/0:27,0:27:56.35:0,56,251	0/0:17,0:17:44.65:0,45,372	0/0:17,0:17:28.30:0,28,317	./.	0/0:11,0:11:23.97:0,24,205	0/0:12,0:12:32.95:0,33,277	0/0:1,0:1:3:0,3,26	0/1:16,0:16:2.61:3,0,135	0/0:23,0:23:62.71:0,63,530	0/0:17,0:17:44.99:0,45,391	0/0:12,0:12:29.99:0,30,260
chr10	42311619	.	T	TAC	2491.69	PASS	AB=0.777;AC=36;AF=0.667;AN=54;BaseQRankSum=-4.038;DP=625;FS=1.909;HRun=0;HaplotypeScore=104.5050;InbreedingCoeff=0.4272;MQ=54.60;MQ0=18;MQRankSum=-0.675;QD=5.59;ReadPosRankSum=-1.114;VQSLOD=3.0227;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:32,0:31:7.67:54,8,0	1/1:7,0:7:1.36:3,1,0	0/1:40,0:22:0:0,0,0	./.	1/1:8,9:17:6.47:133,6,0	0/0:31,0:31:34.85:0,35,554	0/1:14,1:16:10.06:10,0,279	1/1:29,0:29:30.83:277,31,0	1/1:12,15:27:15.05:228,15,0	1/1:23,0:24:10.36:85,10,0	1/1:17,0:17:5.89:50,6,0	0/0:10,0:21:25.39:0,25,121	0/0:25,0:29:62.71:0,63,621	0/0:8,0:19:16.70:0,17,78	1/1:19,0:17:5.95:48,6,0	1/1:10,8:18:7.04:133,7,0	0/1:14,17:31:1.04:423,0,1	1/1:14,0:14:1.41:3,1,0	1/1:5,4:9:11.84:118,12,0	0/1:9,17:29:57.30:292,0,57	1/1:11,2:25:6.15:113,6,0	0/1:16,6:22:61.77:62,0,214	0/0:18,0:18:25.36:0,25,248	0/0:20,0:21:23.39:0,23,224	1/1:18,0:18:8.99:91,9,0	1/1:12,10:22:6.98:227,7,0	0/1:8,6:12:24.64:82,0,25	1/1:10,2:12:3.21:234,3,0
chr10	42313801	.	A	AAG	680.09	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-5.031;DP=261;FS=2.345;HRun=0;HaplotypeScore=29.6061;InbreedingCoeff=0.7944;MQ=74.19;MQ0=0;MQRankSum=-2.252;QD=42.51;ReadPosRankSum=0.396;VQSLOD=4.3266;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,9:10:27.09:472,27,0	1/1:0,6:6:18.06:327,18,0	0/0:6,0:6:14.17:0,14,190	0/0:3,0:3:8.99:0,9,90	0/0:19,0:19:48.15:0,48,666	0/0:8,0:8:21.07:0,21,299	0/0:7,0:7:21.06:0,21,283	0/0:28,0:28:84.25:0,84,1136	0/0:4,0:4:12.04:0,12,171	0/0:9,0:9:27.09:0,27,384	0/0:13,0:13:30.09:0,30,410	0/0:5,0:5:15.05:0,15,213	0/0:1,0:1:3.01:0,3,43	0/0:3,0:3:9.02:0,9,113	0/0:6,0:6:18.05:0,18,240	0/0:9,0:9:21.07:0,21,299	0/0:17,0:17:51.17:0,51,724	0/0:13,0:13:39.13:0,39,555	0/0:19,0:19:51.16:0,51,708	0/0:7,0:7:21.06:0,21,283	0/0:5,0:5:15.03:0,15,180	0/0:4,0:4:12.03:0,12,156	0/0:11,0:11:30.10:0,30,426	0/0:4,0:4:12.04:0,12,171	0/0:9,0:9:27.09:0,27,385	0/0:13,0:13:39.12:0,39,525	0/0:15,0:15:45.15:0,45,641	0/0:7,0:7:18.06:0,18,256
chr10	42314706	.	GTAAA	G	2622.32	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.458;DP=628;FS=5.244;HRun=0;HaplotypeScore=102.9579;InbreedingCoeff=0.9986;MQ=76.98;MQ0=0;MQRankSum=-5.465;QD=42.99;ReadPosRankSum=1.632;VQSLOD=3.8915;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,50:50:99:2218,119,0	1/1:1,10:11:30.10:525,30,0	0/0:28,0:28:81.14:0,81,1869	0/0:18,0:18:44.07:0,44,952	0/0:21,0:21:63.22:0,63,1677	0/0:26,0:26:78.27:0,78,2081	0/0:13,0:13:39.13:0,39,1041	0/0:28,0:28:84.29:0,84,2194	0/0:17,0:17:51.18:0,51,1357	0/0:29,0:29:84.29:0,84,2195	0/0:21,0:21:60.21:0,60,1600	0/0:14,0:14:42.14:0,42,1115	0/0:17,0:17:48.14:0,48,1219	0/0:23,0:23:66.21:0,66,1703	0/0:20,0:20:48.16:0,48,1280	0/0:16,0:16:42.14:0,42,1121	0/0:24,0:24:69.16:0,69,1624	0/0:18,0:18:48.16:0,48,1280	0/0:21,0:21:60.21:0,60,1586	0/0:30,0:30:87.28:0,87,2256	0/0:25,0:25:66.23:0,66,1739	0/0:35,0:35:99:0,102,2722	0/0:28,0:28:78.27:0,78,2057	0/0:22,0:22:63.18:0,63,1564	0/0:28,0:28:81.28:0,81,2161	0/0:24,0:24:66.23:0,66,1728	0/0:13,0:13:39.10:0,39,976	0/0:8,0:8:24.08:0,24,639
chr10	42315735	.	CA	C	3096.41	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=12.356;DP=692;FS=1.667;HRun=8;HaplotypeScore=66.6396;InbreedingCoeff=0.9984;MQ=76.86;MQ0=0;MQRankSum=-2.570;QD=24.77;ReadPosRankSum=1.518;VQSLOD=4.5650;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,105,1244	0/0:13,0:13:39.12:0,39,471	0/0:22,0:22:41.78:0,42,453	0/0:15,0:15:19.24:0,19,342	0/0:30,0:30:84.25:0,84,1003	0/0:23,0:22:63.18:0,63,751	0/0:13,0:13:36.11:0,36,435	0/0:34,0:34:85.49:0,85,1007	0/0:20,1:21:31.21:0,31,659	1/1:3,30:33:87.13:840,87,0	1/1:1,18:19:51.08:491,51,0	0/0:28,0:28:81.23:0,81,966	0/0:29,0:29:78.24:0,78,942	0/0:27,0:27:72.22:0,72,870	1/1:3,26:29:75.11:724,75,0	0/0:24,0:24:48.14:0,48,570	0/0:23,0:23:66.20:0,66,797	1/1:0,19:19:51.08:492,51,0	0/0:17,0:17:42.13:0,42,507	0/0:20,0:20:51.16:0,51,615	0/0:27,0:27:75.20:0,75,881	0/0:26,0:26:69.20:0,69,823	0/0:21,0:21:57.15:0,57,675	0/0:25,0:25:72.22:0,72,870	1/1:0,25:25:75.12:724,75,0	0/0:40,1:41:82.34:0,82,1256	0/0:33,0:33:90.20:0,90,1046	0/0:17,0:17:51.16:0,51,616
chr10	42316452	.	TCACA	T	2495.27	PASS	AB=0.764;AC=37;AF=0.712;AN=52;BaseQRankSum=4.600;DP=493;FS=0.000;HRun=0;HaplotypeScore=99.1390;InbreedingCoeff=0.2933;MQ=64.19;MQ0=9;MQRankSum=-3.591;QD=7.30;ReadPosRankSum=0.522;VQSLOD=2.3854;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:21.05:0,21,365	./.	0/0:26,0:22:1.82:0,2,5	0/0:31,0:16:0:0,0,0	1/1:11,0:16:4.97:23,5,0	0/1:21,0:27:40.92:106,0,41	1/1:3,0:7:11.68:111,12,0	1/1:25,3:27:8.97:92,9,0	1/1:10,0:21:24.03:224,24,0	0/1:11,5:16:22.06:104,0,22	1/1:11,3:14:9.02:122,9,0	1/1:8,0:17:15.02:158,15,0	1/1:5,3:8:3.01:47,3,0	1/1:6,0:14:21.02:195,21,0	1/1:6,8:13:18.53:283,19,0	1/1:9,0:17:12.01:112,12,0	0/0:29,0:30:59.87:0,60,1137	1/1:9,12:19:24.08:376,24,0	./.	0/1:17,3:21:7.63:197,0,8	0/1:7,8:15:4.49:85,0,4	1/1:5,0:10:6.01:56,6,0	1/1:11,0:15:6.01:56,6,0	1/1:15,0:14:4.71:26,5,0	1/1:12,2:18:15.03:192,15,0	0/1:8,4:12:26.43:36,0,26	1/1:9,5:13:2.91:46,3,0	0/0:7,0:7:5.99:0,6,49
chr10	42317400	.	AT	A	675.43	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=4.801;DP=387;FS=6.313;HRun=8;HaplotypeScore=42.2334;InbreedingCoeff=0.9210;MQ=72.73;MQ0=0;MQRankSum=0.439;QD=19.87;ReadPosRankSum=1.378;VQSLOD=3.1032;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:69.17:0,69,813	0/0:7,0:7:21.06:0,21,253	0/0:8,0:8:14.72:0,15,159	0/0:11,0:11:15.04:0,15,169	1/1:3,20:23:57.08:550,57,0	0/0:16,0:16:48.13:0,48,569	0/0:8,0:8:18.05:0,18,212	0/0:40,0:40:96.28:0,96,1144	1/1:1,4:5:9.01:87,9,0	0/0:12,0:12:33.10:0,33,398	0/0:18,0:18:48.15:0,48,576	0/0:8,0:8:21.06:0,21,252	0/0:9,0:9:27.07:0,27,314	0/0:10,0:10:27.08:0,27,326	0/0:13,0:13:39.11:0,39,457	1/1:0,6:6:18.03:174,18,0	0/0:17,0:17:51.16:0,51,615	0/0:20,0:20:45.12:0,45,526	0/0:11,0:11:26.95:0,27,303	0/0:24,0:24:72.21:0,72,856	0/0:4,0:4:12.04:0,12,144	0/0:5,0:5:12.04:0,12,144	0/0:5,0:5:15.05:0,15,180	0/0:5,0:5:12.04:0,12,144	0/0:25,0:25:69.20:0,69,821	0/0:20,0:20:48.11:0,48,563	0/0:14,0:14:42.13:0,42,506	0/0:19,0:19:48.15:0,48,576
chr10	42317418	.	A	AT	1805.11	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-9.379;DP=379;FS=8.098;HRun=9;HaplotypeScore=40.0348;InbreedingCoeff=0.8990;MQ=65.79;MQ0=0;MQRankSum=0.534;QD=22.01;ReadPosRankSum=1.202;VQSLOD=4.0132;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:56.92:0,57,483	0/0:8,0:8:24:0,24,208	0/0:11,0:11:20.46:0,20,158	0/0:5,0:6:13.01:0,13,68	0/0:24,1:25:26.79:0,27,456	0/0:19,0:19:21.58:0,22,341	0/0:5,0:5:15:0,15,130	0/0:38,1:39:83.38:0,83,715	0/0:3,0:3:9:0,9,78	1/1:1,14:15:42.08:445,42,0	1/1:2,13:15:33.09:365,33,0	0/0:6,0:6:14.99:0,15,130	0/0:12,0:12:32.99:0,33,286	0/0:11,0:11:23.97:0,24,205	1/1:2,9:11:21.06:232,21,0	0/0:10,0:10:26.99:0,27,234	0/0:20,0:20:56.96:0,57,489	1/1:2,17:19:22.16:472,22,0	0/0:14,0:14:26.97:0,27,234	0/0:23,0:23:53.95:0,54,465	0/0:3,0:3:9:0,9,78	0/0:4,0:4:9:0,9,78	0/0:4,0:4:12:0,12,104	0/0:4,0:4:2.98:0,3,22	1/1:7,15:22:42.11:465,42,0	0/0:14,0:14:26.98:0,27,234	0/0:18,0:18:50.99:0,51,442	0/0:14,0:14:38.99:0,39,339
chr10	42318763	.	CGT	C	381.24	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=4.680;DP=518;FS=0.827;HRun=0;HaplotypeScore=100.3906;InbreedingCoeff=0.8272;MQ=58.93;MQ0=4;MQRankSum=0.106;QD=9.30;ReadPosRankSum=-2.092;VQSLOD=3.1538;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:30,1:31:35.91:358,36,0	1/1:3,7:10:8.82:137,9,0	0/0:5,0:2:2.88:0,3,15	0/0:8,0:6:1.11:0,1,3	0/0:17,0:17:28.81:0,29,268	0/0:12,0:12:29.85:0,30,393	0/0:20,0:20:46.83:0,47,634	0/0:19,0:19:35.59:0,36,379	0/0:17,0:17:43.41:0,43,527	0/0:28,0:28:47.67:0,48,863	0/0:26,0:26:43.83:0,44,488	0/0:20,0:20:47.89:0,48,738	0/0:10,0:10:24.95:0,25,356	0/0:20,0:20:48.40:0,48,727	0/0:11,0:11:23.47:0,23,280	0/0:12,0:12:35.21:0,35,360	0/0:27,0:27:55.66:0,56,830	0/0:16,0:15:29.09:0,29,373	0/0:11,0:10:23.19:0,23,179	0/0:28,0:28:43.06:0,43,510	0/0:26,0:25:43.83:0,44,474	0/0:18,0:18:47.87:0,48,701	0/0:18,0:17:37.03:0,37,660	0/0:28,0:27:50.92:0,51,1016	0/0:19,0:19:35.80:0,36,500	0/0:22,0:22:53.14:0,53,674	0/0:19,0:19:44.11:0,44,419	0/0:19,0:19:49.67:0,50,533
chr10	42318772	.	GCA	G	1206.96	PASS	AB=0.853;AC=21;AF=0.404;AN=52;BaseQRankSum=2.219;DP=530;FS=0.567;HRun=0;HaplotypeScore=101.9959;InbreedingCoeff=0.4072;MQ=56.26;MQ0=7;MQRankSum=0.033;QD=4.99;ReadPosRankSum=1.760;VQSLOD=2.9012;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:21.66:0,22,192	1/1:9,0:9:1.13:3,1,0	./.	./.	0/1:5,10:18:20.85:156,0,21	0/0:11,0:11:14.77:0,15,202	0/1:17,2:19:9.45:9,0,230	0/1:20,0:19:18.73:106,0,19	0/1:13,2:15:40.99:41,0,142	0/0:17,0:30:64.83:0,65,498	0/0:16,0:32:19.08:0,19,104	0/0:20,0:19:36.08:0,36,471	0/1:9,0:9:1.56:2,0,187	0/1:19,0:19:8.38:8,0,353	0/0:9,0:12:8.41:0,8,48	1/1:7,8:15:18.05:200,18,0	0/0:13,0:31:34.26:0,34,327	0/0:12,0:15:3.48:0,3,29	1/1:5,4:9:11.42:102,11,0	1/1:13,13:27:17.80:154,18,0	1/1:14,13:25:9.02:100,9,0	0/0:20,0:20:21.02:0,21,270	0/0:19,0:19:9.24:0,9,437	0/0:26,4:29:23.57:0,24,606	0/0:12,0:22:11.74:0,12,89	1/1:13,10:23:25.28:251,25,0	0/1:5,10:15:4.05:118,0,4	1/1:10,6:16:12.03:133,12,0
chr10	42320044	.	A	AAGATGTGAAAAAGATGGG	2796.66	PASS	AB=0.714;AC=35;AF=0.972;AN=36;BaseQRankSum=-1.733;DP=40;FS=0.000;HRun=0;HaplotypeScore=21.3914;InbreedingCoeff=-0.1735;MQ=138.96;MQ0=0;MQRankSum=-1.408;QD=75.59;ReadPosRankSum=-0.866;VQSLOD=2.5173;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,0:1:2.97:20,3,0	1/1:3,0:3:8.98:136,9,0	1/1:3,1:6:15.05:1119,15,0	0/1:3,0:5:15.92:298,0,16	./.	./.	1/1:1,0:1:3.01:42,3,0	1/1:3,0:3:9.03:217,9,0	./.	1/1:1,0:1:3:28,3,0	./.	./.	./.	./.	1/1:3,0:3:2.97:20,3,0	1/1:1,0:1:2.98:21,3,0	./.	./.	1/1:1,0:1:2.98:22,3,0	1/1:1,0:1:3.01:138,3,0	1/1:1,0:1:3.01:41,3,0	1/1:1,0:1:3.01:92,3,0	1/1:1,0:1:3.01:71,3,0	./.	1/1:2,0:2:6.02:206,6,0	1/1:2,0:2:3.01:114,3,0	1/1:1,0:1:3.01:91,3,0	1/1:3,0:3:9.03:205,9,0
chr10	42320384	.	C	CA	971.41	PASS	AB=0.829;AC=15;AF=0.268;AN=56;BaseQRankSum=6.704;DP=557;FS=5.083;HRun=10;HaplotypeScore=77.6496;InbreedingCoeff=0.5515;MQ=68.36;MQ0=1;MQRankSum=-0.252;QD=6.43;ReadPosRankSum=-3.961;VQSLOD=1.1077;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:29.81:0,30,89	0/0:18,0:18:14.41:0,14,37	0/0:16,0:15:20.63:0,21,169	0/1:16,0:15:1.11:1,0,97	1/1:6,1:28:4.41:100,4,0	0/1:10,0:10:1.22:1,0,170	0/0:22,1:24:26.98:0,27,417	0/0:22,0:23:43.94:0,44,351	1/1:3,0:10:8.69:47,9,0	1/1:4,15:19:38.63:341,39,0	0/1:5,13:18:19.86:248,0,20	0/0:17,1:19:14.98:0,15,316	0/0:17,0:17:44.93:0,45,366	0/0:17,0:17:41.95:0,42,345	0/1:4,14:18:1.94:111,0,2	0/1:13,0:13:8.09:32,0,8	0/0:29,0:29:71.01:0,71,585	1/1:2,7:9:4.11:116,4,0	0/0:22,0:20:41.54:0,42,344	0/0:28,0:30:75.50:0,76,602	0/0:16,0:17:28.99:0,29,227	0/0:23,0:24:70.96:0,71,572	0/0:14,1:15:0.97:0,1,214	0/0:20,0:20:50.90:0,51,415	1/1:3,6:10:14.87:139,15,0	0/0:21,0:21:50.92:0,51,416	0/0:29,0:32:78.96:0,79,627	0/0:14,0:15:40.99:0,41,326
chr10	42320392	.	AAAG	A	1075.62	PASS	AB=1.000;AC=10;AF=0.179;AN=56;BaseQRankSum=6.562;DP=542;FS=13.488;HRun=0;HaplotypeScore=90.5797;InbreedingCoeff=0.2954;MQ=64.63;MQ0=1;MQRankSum=1.451;QD=6.44;ReadPosRankSum=-2.401;VQSLOD=1.1287;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:44,4:48:82.77:496,83,0	1/1:15,3:18:32.20:239,32,0	0/0:16,0:15:35.81:0,36,450	0/0:12,0:11:20.45:0,20,255	0/1:27,0:27:73.92:74,0,94	0/0:11,0:11:4.87:0,5,468	0/0:22,0:22:66.16:0,66,1152	0/0:23,0:23:56.15:0,56,983	0/0:9,0:9:8.89:0,9,58	0/1:25,0:25:90.20:223,0,90	0/0:17,0:17:17.22:0,17,189	0/0:19,0:19:56.17:0,56,959	0/0:15,0:15:45.13:0,45,854	0/0:14,0:14:42.09:0,42,718	0/1:16,0:16:11.57:12,0,82	0/1:12,0:12:20.59:21,0,91	0/0:29,0:29:78.57:0,79,1344	0/1:9,0:9:21.68:22,0,30	0/0:21,0:19:54.12:0,54,922	0/0:27,0:27:78.79:0,79,1385	0/0:13,0:13:39.03:0,39,545	0/0:26,0:26:78.19:0,78,1383	0/0:15,0:15:42.10:0,42,718	0/0:21,0:21:57.15:0,57,1080	0/1:12,0:12:4.44:146,0,4	0/0:19,0:19:57.13:0,57,988	0/0:31,0:31:84.21:0,84,1541	0/0:15,0:15:42.12:0,42,829
chr10	42320393	.	AAG	A	2393.58	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=8.371;DP=549;FS=22.111;HRun=0;HaplotypeScore=77.2876;InbreedingCoeff=0.5624;MQ=64.58;MQ0=1;MQRankSum=2.635;QD=12.87;ReadPosRankSum=-1.838;VQSLOD=1.2912;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,40:48:99:1313,107,0	1/1:4,14:18:38.80:457,39,0	0/0:16,0:15:35.44:0,35,393	0/0:12,0:11:20.59:0,21,205	0/1:27,0:27:5.72:120,0,6	0/0:11,0:11:26.61:0,27,418	0/0:24,0:24:72.01:0,72,999	0/0:25,0:25:62.71:0,63,871	0/0:9,0:9:7.40:0,7,38	1/1:26,0:26:39.38:337,39,0	0/1:17,0:17:9.45:9,0,52	0/0:19,0:19:56.74:0,57,793	0/0:16,0:16:48.14:0,48,731	0/0:14,0:14:42.13:0,42,619	0/1:17,0:17:18.03:43,0,18	0/1:12,0:12:48.05:111,0,48	0/0:29,0:29:79.02:0,79,1137	0/1:9,0:9:3.07:22,0,3	0/0:21,0:19:54.14:0,54,782	0/0:27,0:27:62.71:0,63,1137	0/0:14,0:14:41.89:0,42,496	0/0:26,0:26:78.06:0,78,1147	0/0:15,0:15:42.11:0,42,595	0/0:20,0:20:57.13:0,57,874	1/1:12,0:12:22.99:159,23,0	0/0:19,0:19:57.11:0,57,826	0/0:31,0:31:83.87:0,84,1241	0/0:15,0:15:41.96:0,42,660
chr10	42320394	.	AG	A	2484.76	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=11.479;DP=550;FS=19.613;HRun=1;HaplotypeScore=68.3337;InbreedingCoeff=0.9637;MQ=63.72;MQ0=1;MQRankSum=0.199;QD=12.55;ReadPosRankSum=-1.664;VQSLOD=0.6670;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:44,4:48:99:794,107,0	1/1:17,1:18:38.49:272,38,0	0/0:16,0:15:25.83:0,26,325	0/0:11,0:10:12.24:0,12,143	1/1:25,2:27:40.87:289,41,0	0/0:11,0:11:29.23:0,29,340	0/0:25,0:25:71.49:0,71,827	0/0:25,0:25:62.92:0,63,716	1/1:9,0:9:3.62:12,4,0	1/1:27,0:27:73.51:544,74,0	1/1:18,0:18:22.60:176,23,0	0/0:20,0:20:56.39:0,56,638	0/0:16,0:16:48.10:0,48,575	0/0:14,0:14:42.13:0,42,525	1/1:17,0:17:13.46:125,13,0	1/1:12,0:12:14:160,14,0	0/0:28,0:28:78.15:0,78,942	1/1:9,0:9:16.43:90,16,0	0/0:20,0:18:54.15:0,54,650	0/0:27,0:27:62.68:0,63,916	0/0:14,0:14:37.88:0,38,422	0/0:26,0:26:74.62:0,75,918	0/0:15,0:15:42.01:0,42,472	0/0:20,0:20:60.15:0,60,727	1/1:13,0:13:30.72:237,31,0	0/0:19,0:19:57.12:0,57,682	0/0:30,0:30:78.85:0,79,980	0/0:15,0:15:40.93:0,41,521
chr10	42324471	.	GAA	G	936.33	PASS	AB=0.980;AC=6;AF=0.107;AN=56;BaseQRankSum=7.462;DP=607;FS=0.000;HRun=10;HaplotypeScore=94.7308;InbreedingCoeff=0.6629;MQ=79.58;MQ0=0;MQRankSum=-4.255;QD=10.76;ReadPosRankSum=1.463;VQSLOD=1.5217;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,25:28:66.16:736,66,0	1/1:1,10:11:30:318,30,0	0/0:27,0:22:47.46:0,47,516	0/1:23,1:21:6.85:7,0,273	0/0:23,0:24:65.71:0,66,998	0/0:23,0:23:66.22:0,66,1044	0/0:12,0:12:33.11:0,33,524	0/0:30,0:29:69.22:0,69,1070	0/0:23,0:23:66.16:0,66,966	0/0:22,0:22:59.66:0,60,460	0/0:25,0:25:63:0,63,577	0/0:3,1:18:7.49:0,7,111	0/0:19,0:20:53.63:0,54,791	0/0:2,0:15:27.45:0,27,94	0/0:23,0:23:29.61:0,30,428	0/0:23,0:23:63.21:0,63,980	0/0:18,0:18:44.64:0,45,675	0/1:24,0:24:4.60:5,0,431	0/0:23,0:23:57.16:0,57,823	0/0:31,0:32:89.67:0,90,1228	0/0:11,0:11:24.07:0,24,357	0/0:24,0:25:60.17:0,60,879	0/0:23,0:24:62.66:0,63,888	0/0:10,0:10:24.05:0,24,336	0/0:22,0:22:52.05:0,52,494	0/0:24,0:24:60.20:0,60,952	0/0:22,0:22:54.15:0,54,792	0/0:22,0:22:60.18:0,60,905
chr10	42324955	.	CT	C	396.71	PASS	AB=0.921;AC=7;AF=0.125;AN=56;BaseQRankSum=3.960;DP=551;FS=1.293;HRun=11;HaplotypeScore=78.5409;InbreedingCoeff=0.4679;MQ=72.02;MQ0=0;MQRankSum=0.105;QD=5.59;ReadPosRankSum=1.937;VQSLOD=1.8198;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,13:16:38.95:320,39,0	1/1:1,7:9:20:154,20,0	0/1:10,1:11:2.25:2,0,89	0/1:14,1:15:47.39:47,0,103	0/0:7,0:24:54.85:0,55,299	0/0:15,1:16:11.38:0,11,313	0/0:14,0:14:30.08:0,30,320	0/0:25,1:28:51.39:0,51,489	0/0:2,0:21:48.42:0,48,247	0/0:19,0:20:23.31:0,23,438	0/0:18,0:19:47.95:0,48,494	0/0:13,0:15:32.76:0,33,308	0/0:16,0:17:44.94:0,45,456	0/0:16,3:19:1.83:0,2,423	0/0:33,0:33:87.20:0,87,915	0/0:2,0:15:37.07:0,37,191	0/0:29,0:31:86.86:0,87,876	0/0:22,0:22:48.09:0,48,500	0/0:24,2:25:7.77:0,8,466	0/0:24,1:26:35.33:0,35,559	0/0:16,2:18:1.82:0,2,417	0/0:17,0:19:41.88:0,42,411	0/0:19,1:20:29.49:0,29,519	0/0:26,0:26:72.18:0,72,768	0/0:11,0:12:29.89:0,30,289	0/1:18,2:20:4.14:4,0,371	0/0:25,1:26:34.66:0,35,602	0/0:12,0:12:13.42:0,13,263
chr10	42326705	.	A	AG	7909.95	PASS	AB=0.769;AC=55;AF=0.982;AN=56;BaseQRankSum=0.009;DP=444;FS=1.590;HRun=0;HaplotypeScore=159.2262;InbreedingCoeff=-0.0272;MQ=63.36;MQ0=0;MQRankSum=-2.576;QD=17.82;ReadPosRankSum=1.766;VQSLOD=6.5285;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:14,4:18:32.55:299,33,0	1/1:2,6:8:23.11:141,23,0	1/1:6,2:8:1.70:71,2,0	0/1:7,3:9:55.78:56,0,63	1/1:3,13:16:39.27:254,39,0	1/1:13,12:24:52.23:394,52,0	1/1:1,9:10:25.64:145,26,0	1/1:5,15:20:44.47:351,44,0	1/1:9,5:14:35.16:290,35,0	1/1:6,15:20:52.88:431,53,0	1/1:5,18:23:63.57:478,64,0	1/1:7,9:16:32.78:252,33,0	1/1:7,11:18:47.50:308,47,0	1/1:5,14:19:54.04:344,54,0	1/1:5,17:22:50.06:344,50,0	1/1:3,12:14:40.16:258,40,0	1/1:6,8:14:34.33:227,34,0	1/1:9,5:14:23.75:194,24,0	1/1:4,6:10:20.85:168,21,0	1/1:6,14:20:57.04:406,57,0	1/1:6,9:15:20.13:123,20,0	1/1:8,6:14:37.60:308,38,0	1/1:7,9:16:46.67:381,47,0	1/1:3,4:7:13.44:80,13,0	1/1:3,18:21:59.94:372,60,0	1/1:10,9:19:56.61:559,57,0	1/1:10,12:22:57.78:467,58,0	1/1:6,3:9:23.77:206,24,0
chr10	42326834	.	TACAC	T	91.53	PASS	AB=0.868;AC=4;AF=0.087;AN=46;BaseQRankSum=2.446;DP=432;FS=12.952;HRun=0;HaplotypeScore=126.8224;InbreedingCoeff=0.3825;MQ=57.12;MQ0=13;MQRankSum=-2.920;QD=2.13;ReadPosRankSum=-0.245;VQSLOD=1.9184;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	0/0:3,9:12:0:0,0,0	0/1:16,0:15:27.91:28,0,263	0/0:21,0:21:15.99:0,16,319	0/0:19,0:17:15.05:0,15,314	0/1:9,4:14:5.80:15,0,6	0/0:13,0:14:20.76:0,21,244	./.	0/0:8,0:7:6:0,6,61	0/0:10,0:9:14.79:0,15,243	0/0:7,0:7:12.04:0,12,229	0/0:18,0:18:6:0,6,75	1/1:7,5:13:14.91:155,15,0	0/0:14,0:18:32.84:0,33,500	0/0:16,0:16:6.01:0,6,70	0/0:15,0:15:12.93:0,13,244	0/0:12,0:13:26.81:0,27,467	0/0:37,0:38:41.88:0,42,805	0/0:16,0:16:21.07:0,21,435	0/0:17,0:18:27.09:0,27,551	0/0:25,0:28:56.93:0,57,1201	0/0:11,0:11:10.56:0,11,149	0/0:12,0:12:5.92:0,6,242	0/0:15,0:14:21.07:0,21,478	0/0:7,0:7:7.98:0,8,186
chr10	42326870	.	C	CACCA	717.91	PASS	AB=0.874;AC=10;AF=0.185;AN=54;BaseQRankSum=2.165;DP=577;FS=6.792;HRun=0;HaplotypeScore=113.4190;InbreedingCoeff=0.5761;MQ=45.43;MQ0=44;MQRankSum=0.359;QD=5.84;ReadPosRankSum=0.400;VQSLOD=1.3918;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:24:0:0,0,0	0/1:8,0:8:0:0,0,0	0/0:22,0:5:9.02:0,9,108	0/0:32,0:4:5.85:0,6,50	0/0:25,0:25:35.76:0,36,397	0/0:19,0:15:35.54:0,36,458	0/0:22,0:20:46.93:0,47,598	0/0:24,0:20:54.85:0,55,544	0/0:17,0:17:22.85:0,23,245	1/1:14,0:11:23.50:387,24,0	./.	0/0:9,0:8:15:0,15,162	0/0:17,0:14:23.77:0,24,387	0/0:18,0:16:35.48:0,35,424	1/1:1,17:19:6.02:122,6,0	0/0:18,0:17:29.84:0,30,312	0/1:24,0:24:99:150,0,350	1/1:1,12:17:6.02:81,6,0	0/0:13,0:10:21.02:0,21,293	0/0:20,0:17:51.09:0,51,641	0/0:52,0:47:71.57:0,72,899	0/0:18,0:17:32.88:0,33,465	0/0:27,0:26:57.10:0,57,745	0/0:36,0:35:84.05:0,84,1217	0/1:3,8:12:52.28:115,0,52	0/0:25,0:19:50.29:0,50,601	0/0:11,0:10:33.09:0,33,423	0/0:11,0:11:22.02:0,22,331
chr10	42327167	.	CTT	C	4327.92	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=10.897;DP=634;FS=13.342;HRun=4;HaplotypeScore=80.0248;InbreedingCoeff=0.9999;MQ=92.03;MQ0=1;MQRankSum=-3.750;QD=37.31;ReadPosRankSum=3.525;VQSLOD=3.5120;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:75.24:0,75,1359	0/0:14,0:14:39.10:0,39,685	0/0:31,0:30:84.52:0,85,1397	0/0:26,0:25:38.72:0,39,959	0/0:21,0:21:57.15:0,57,1031	0/0:27,0:27:75.26:0,75,1383	0/0:20,0:20:57.20:0,57,1063	0/0:25,0:25:72.24:0,72,1313	0/0:19,0:19:57.20:0,57,1053	1/1:0,26:26:78.26:1147,78,0	1/1:1,20:21:54.18:795,54,0	0/0:16,0:16:48.16:0,48,876	0/0:21,0:21:63.22:0,63,1162	0/0:15,0:15:45.15:0,45,835	1/1:1,19:20:48.07:707,48,0	0/0:18,0:18:54.19:0,54,1003	0/0:22,0:22:63.20:0,63,1141	1/1:0,24:23:57.19:839,57,0	0/0:28,0:28:81.27:0,81,1467	0/0:19,0:19:57.20:0,57,1063	0/0:22,0:22:63.22:0,63,1180	0/0:25,0:25:75.26:0,75,1400	0/0:24,0:24:72.25:0,72,1334	0/0:20,0:20:57.18:0,57,1030	1/1:0,25:25:57.19:839,57,0	0/0:38,0:38:99:0,114,2114	0/0:30,0:30:87.30:0,87,1624	0/0:11,0:11:33.11:0,33,618
chr10	42327431	.	C	CT	8871.45	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-15.844;DP=671;FS=0.638;HRun=4;HaplotypeScore=66.4616;InbreedingCoeff=0.9998;MQ=84.10;MQ0=0;MQRankSum=-6.520;QD=36.36;ReadPosRankSum=3.957;VQSLOD=5.0111;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,38:38:99:1516,111,0	1/1:0,13:13:36.12:491,36,0	0/0:35,0:32:77.99:0,78,833	0/0:25,0:24:51.69:0,52,549	1/1:4,27:31:75.14:980,75,0	0/0:30,0:30:87.25:0,87,986	0/0:19,0:19:51.14:0,51,578	0/0:29,0:29:69.08:0,69,741	1/1:2,14:16:39.13:534,39,0	1/1:1,35:36:99:1418,105,0	1/1:1,20:21:60.20:821,60,0	0/0:29,0:29:78.19:0,78,865	0/0:18,0:18:51.13:0,51,568	0/0:27,0:27:72.20:0,72,817	1/1:1,28:29:69.23:943,69,0	1/1:0,19:19:51.17:698,51,0	0/0:13,0:13:33.07:0,33,361	1/1:2,14:16:39.13:533,39,0	0/0:28,0:28:66.16:0,66,737	0/0:29,0:29:84.21:0,84,933	0/0:19,0:19:54.12:0,54,590	0/0:23,0:23:66.16:0,66,728	0/0:24,0:24:69.20:0,69,782	0/0:17,0:17:48.14:0,48,544	1/1:1,24:25:69.23:938,69,0	0/0:26,0:26:75.21:0,75,851	0/0:25,0:25:72.20:0,72,816	0/0:11,0:11:30.08:0,30,340
chr10	42328061	.	TTGACTC	T	174.65	PASS	AB=0.609;AC=1;AF=0.018;AN=56;BaseQRankSum=2.961;DP=557;FS=0.000;HRun=0;HaplotypeScore=111.8185;InbreedingCoeff=-0.0184;MQ=81.34;MQ0=0;MQRankSum=-3.409;QD=12.47;ReadPosRankSum=1.021;VQSLOD=2.0524;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:51.18:0,51,1768	0/0:15,0:15:45.15:0,45,1549	0/0:17,0:17:51.13:0,51,1316	0/0:13,0:13:30.10:0,30,828	0/0:23,0:23:66.23:0,66,2198	0/0:25,0:25:69.22:0,69,2190	0/0:14,0:14:39.13:0,39,1263	0/0:31,0:31:93.31:0,93,3146	0/0:20,0:20:60.21:0,60,2068	0/0:27,0:27:75.26:0,75,2571	0/0:31,0:30:93.31:0,93,3133	0/0:15,0:15:45.15:0,45,1590	0/0:20,0:20:57.20:0,57,1927	0/0:16,0:16:48.16:0,48,1602	0/0:20,0:20:57.18:0,57,1837	0/0:17,0:17:51.18:0,51,1784	0/1:5,9:14:90.96:249,0,91	0/0:8,0:8:24.08:0,24,837	0/0:20,0:20:45.15:0,45,1473	0/0:28,0:28:81.28:0,81,2722	0/0:13,0:13:39.12:0,39,1170	0/0:24,0:24:66.23:0,66,2251	0/0:25,0:25:75.23:0,75,2370	0/0:11,0:11:30.09:0,30,944	0/0:19,0:19:57.20:0,57,1824	0/0:25,0:25:75.26:0,75,2639	0/0:38,0:38:99:0,102,3331	0/0:7,0:7:21.07:0,21,742
chr10	42328148	.	A	ATT	95.24	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.187;DP=588;FS=6.286;HRun=0;HaplotypeScore=78.5130;InbreedingCoeff=0.9968;MQ=79.91;MQ0=0;MQRankSum=-3.823;QD=3.40;ReadPosRankSum=0.522;VQSLOD=1.3738;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:0,0:18:34.93:126,35,0	1/1:0,0:10:24.95:90,25,0	0/0:28,0:28:77.37:0,77,1170	0/0:25,1:26:64.22:0,64,1049	0/0:23,0:23:69.24:0,69,1125	0/0:24,0:24:69.22:0,69,1101	0/0:22,0:22:66.21:0,66,1052	0/0:31,0:31:90.29:0,90,1411	0/0:28,0:28:81.26:0,81,1287	0/0:23,0:23:69.23:0,69,1100	0/0:23,0:23:69.24:0,69,1118	0/0:16,0:16:48.16:0,48,779	0/0:24,0:24:72.25:0,72,1161	0/0:13,0:13:39.12:0,39,609	0/0:18,0:18:54.15:0,54,850	0/0:20,0:20:57.19:0,57,929	0/0:23,0:23:51.17:0,51,831	0/0:13,0:13:32.90:0,33,518	0/0:23,0:23:69.24:0,69,1119	0/0:30,0:30:90.31:0,90,1464	0/0:29,0:29:84.20:0,84,1334	0/0:18,0:18:54.17:0,54,855	0/0:20,0:20:60.20:0,60,959	0/0:15,0:15:41.44:0,41,684	0/0:8,0:8:24.06:0,24,365	0/0:20,0:20:60.20:0,60,958	0/0:33,0:33:99:0,99,1585	0/0:9,0:9:24.08:0,24,391
chr10	42329412	.	A	AT	1234.75	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=2.611;DP=585;FS=2.004;HRun=8;HaplotypeScore=60.5403;InbreedingCoeff=0.9882;MQ=84.64;MQ0=0;MQRankSum=-3.495;QD=22.45;ReadPosRankSum=0.020;VQSLOD=4.0456;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,38:40:81.24:935,81,0	1/1:1,12:15:38.88:422,39,0	0/0:20,1:21:37.02:0,37,307	0/0:19,0:19:20.98:0,21,238	0/0:29,0:30:86.08:0,86,774	0/0:23,0:23:66.01:0,66,599	0/0:16,0:16:39.01:0,39,357	0/0:26,0:26:48:0,48,439	0/0:17,0:17:39.01:0,39,357	0/0:24,0:24:60.02:0,60,547	0/0:24,0:24:63.03:0,63,576	0/0:22,0:22:45.01:0,45,411	0/0:14,0:14:36.01:0,36,329	0/0:26,0:26:75.04:0,75,686	0/0:29,0:29:84.03:0,84,764	0/0:10,0:10:27.01:0,27,247	0/0:22,1:23:28.42:0,28,514	0/0:10,0:10:30.02:0,30,274	0/0:19,0:19:44.05:0,44,387	0/0:28,0:28:78.04:0,78,714	0/0:5,0:5:15.01:0,15,137	0/0:17,0:17:42.02:0,42,384	0/0:27,0:27:66.02:0,66,603	0/0:16,0:16:48.03:0,48,439	0/0:16,0:16:42.01:0,42,384	0/0:22,0:22:57.03:0,57,522	0/0:32,0:31:87.04:0,87,796	0/0:14,0:14:39.01:0,39,357
chr10	42362081	.	CGT	C	1946.93	PASS	AB=0.923;AC=21;AF=0.389;AN=54;BaseQRankSum=2.602;DP=565;FS=0.527;HRun=0;HaplotypeScore=76.4580;InbreedingCoeff=0.4048;MQ=63.30;MQ0=16;MQRankSum=1.741;QD=6.60;ReadPosRankSum=0.106;VQSLOD=3.1062;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:31:5.74:0,6,37	0/0:9,0:9:2.80:0,3,26	0/0:31,0:17:5.85:0,6,54	./.	0/0:7,0:22:13.90:0,14,68	0/1:21,2:23:85.27:85,0,243	0/1:18,4:23:11.43:11,0,360	1/1:26,13:41:38.49:420,38,0	0/0:6,0:16:5.92:0,6,43	0/0:13,0:25:24.53:0,25,191	0/0:10,0:13:2.61:0,3,12	0/0:11,0:10:15.05:0,15,210	0/0:13,0:13:3.31:0,3,284	0/1:20,1:19:17.69:18,0,384	0/0:7,0:13:5.49:0,5,35	0/0:4,0:8:3:0,3,26	1/1:7,12:20:26.74:262,27,0	0/0:19,0:17:19.94:0,20,166	1/1:11,1:13:1.72:80,2,0	1/1:11,15:27:33.86:390,34,0	1/1:15,12:30:32.61:268,33,0	0/0:17,0:16:24.06:0,24,344	0/1:18,1:19:32.58:33,0,346	0/1:29,0:29:20.12:20,0,639	0/0:6,0:19:10.05:0,10,50	1/1:9,13:22:35.19:346,35,0	1/1:7,8:18:11.70:96,12,0	1/1:3,3:6:9.03:101,9,0
chr10	42364489	.	G	GGCAC	2384.54	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=-6.253;DP=569;FS=4.904;HRun=0;HaplotypeScore=94.7415;InbreedingCoeff=0.6716;MQ=74.88;MQ0=0;MQRankSum=1.405;QD=27.41;ReadPosRankSum=1.017;VQSLOD=3.2385;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:13,31:47:30.63:1880,31,0	1/1:5,8:13:21.07:522,21,0	0/0:20,0:14:14.20:0,14,153	0/0:14,0:13:1.97:0,2,34	0/0:24,0:24:47.78:0,48,747	0/0:10,0:10:18.05:0,18,274	0/0:29,0:29:75.15:0,75,1074	0/0:12,0:12:6.02:0,6,101	0/0:14,0:14:36.09:0,36,554	0/0:31,0:31:72.23:0,72,1147	0/0:25,0:25:69.21:0,69,1113	0/0:20,0:20:33.11:0,33,554	0/0:15,0:15:33.10:0,33,531	0/0:19,0:19:54.13:0,54,809	0/0:19,0:19:45.12:0,45,707	0/0:17,0:17:42.10:0,42,627	0/1:27,0:27:99:111,0,459	0/0:15,0:15:45.11:0,45,682	0/0:23,0:23:48.13:0,48,715	0/0:26,0:26:45.09:0,45,655	0/0:21,0:21:27.08:0,27,420	0/0:22,0:22:51.15:0,51,807	0/0:18,0:18:48.14:0,48,782	0/0:14,0:14:36.08:0,36,577	0/0:23,0:23:60.18:0,60,985	0/0:28,0:28:72.23:0,72,1163	0/0:13,0:13:30.09:0,30,480	0/0:10,0:10:18.04:0,18,277
chr10	42365804	.	GTGTGTGTGTATGTGGCA	G	1704.86	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=5.392;DP=1057;FS=21.860;HRun=0;HaplotypeScore=416.6777;InbreedingCoeff=0.9180;MQ=56.00;MQ0=25;MQRankSum=-5.648;QD=25.45;ReadPosRankSum=-2.076;VQSLOD=0.5264;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:60.35:0,60,2817	0/0:16,0:16:33.11:0,33,1445	0/0:72,0:17:17.70:0,18,345	0/0:61,0:21:22.36:0,22,360	1/1:13,2:15:3.01:134,3,0	0/0:23,0:23:45.15:0,45,2161	0/0:34,0:34:75.18:0,75,2751	0/0:47,0:46:67.16:0,67,1937	1/1:23,3:24:20.14:737,20,0	0/0:50,0:49:87.26:0,87,3857	0/0:21,0:21:36.12:0,36,1427	0/0:42,0:42:75.15:0,75,2868	0/0:36,0:36:78.06:0,78,4283	0/0:46,0:46:71.98:0,72,3192	0/0:40,0:40:63.02:0,63,2810	1/1:22,4:26:13.17:962,13,0	0/0:34,0:34:75.20:0,75,3075	0/0:39,0:38:38.62:0,39,3548	0/0:36,0:31:54.10:0,54,1640	0/0:24,0:24:45.15:0,45,1949	0/0:120,0:119:99:0,222,10897	0/0:29,0:28:45.15:0,45,2311	0/0:16,0:15:26.30:0,26,1222	0/0:66,0:66:99:0,126,5744	0/0:16,0:16:30.10:0,30,1657	0/0:35,0:34:60.20:0,60,2291	0/0:31,0:31:60.18:0,60,2758	0/0:16,0:16:39.09:0,39,1733
chr10	42365821	.	A	ATGTG	1322.95	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=7.387;DP=1011;FS=11.332;HRun=0;HaplotypeScore=224.9323;InbreedingCoeff=0.9340;MQ=55.39;MQ0=12;MQRankSum=-5.124;QD=18.37;ReadPosRankSum=-5.074;VQSLOD=1.3729;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:37:61.43:0,61,1010	0/0:17,0:17:36.12:0,36,581	0/0:46,0:21:42.06:0,42,613	0/0:62,0:28:54.53:0,55,809	1/1:9,5:15:3:67,3,0	0/0:20,0:20:48.12:0,48,787	0/0:37,0:37:73.20:0,73,1228	0/0:50,0:49:99:0,108,1771	1/1:18,9:27:36.64:807,37,0	0/0:40,0:40:87.23:0,87,1470	0/0:19,0:19:38.95:0,39,607	0/0:46,0:46:99:0,102,1676	0/0:38,0:38:96.19:0,96,1637	0/0:42,0:42:71.82:0,72,1150	0/0:33,0:33:72.69:0,73,1158	1/1:20,6:29:29.08:582,29,0	0/0:34,0:34:75.20:0,75,1257	0/0:41,0:40:41.62:0,42,1252	0/0:28,0:26:57.11:0,57,902	0/0:23,0:23:59.96:0,60,929	0/0:123,0:122:99:0,259,4387	0/0:23,0:23:47.75:0,48,794	0/0:19,0:19:42.60:0,43,692	0/0:65,0:65:99:0,141,2210	0/0:18,0:18:42.14:0,42,731	0/0:28,0:28:75.24:0,75,1281	0/0:31,0:31:78.09:0,78,1326	0/0:16,0:16:42.14:0,42,729
chr10	42365848	.	G	GGT	1083.74	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=2.072;DP=1033;FS=1.530;HRun=0;HaplotypeScore=241.7836;InbreedingCoeff=0.9949;MQ=55.93;MQ0=13;MQRankSum=-3.515;QD=24.08;ReadPosRankSum=-1.672;VQSLOD=3.6345;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:17,14:31:54.16:789,54,0	1/1:5,9:14:27.09:416,27,0	0/0:42,0:15:21.06:0,21,263	0/0:66,0:32:56.55:0,57,695	0/0:20,0:19:30.28:0,30,354	0/0:20,0:20:48.14:0,48,597	0/0:49,0:49:99:0,104,1295	0/0:48,0:45:84.23:0,84,1040	0/0:28,0:28:64.39:0,64,752	0/0:42,0:42:93.27:0,93,1165	0/0:16,0:16:30.09:0,30,376	0/0:47,0:47:99:0,114,1396	0/0:43,0:43:99:0,99,1258	0/0:36,0:36:72.03:0,72,889	0/0:31,0:31:57.17:0,57,711	0/0:32,0:31:87.25:0,87,1063	0/0:30,0:30:75.19:0,75,924	0/0:43,0:42:92.24:0,92,1107	0/0:24,0:22:53.53:0,54,650	0/0:26,0:26:75.23:0,75,941	0/0:125,0:124:99:0,247,3078	0/0:28,0:28:60.16:0,60,763	0/0:21,0:21:54.07:0,54,686	0/0:69,0:69:99:0,135,1718	0/0:23,0:23:51.12:0,51,627	0/0:36,0:36:99:0,102,1295	0/0:25,0:25:60.17:0,60,748	0/0:18,0:18:21.36:0,21,476
chr10	42365868	.	ATG	A	20942.45	PASS	AB=0.856;AC=52;AF=0.929;AN=56;BaseQRankSum=-6.860;DP=1062;FS=3.015;HRun=0;HaplotypeScore=184.8479;InbreedingCoeff=0.5195;MQ=56.97;MQ0=30;MQRankSum=5.220;QD=20.53;ReadPosRankSum=4.677;VQSLOD=5.1075;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,24:35:22.49:668,22,0	1/1:5,9:13:27.01:300,27,0	0/0:42,0:10:15.04:0,15,188	0/1:60,0:19:1.75:2,0,63	1/1:6,17:22:39.04:483,39,0	1/1:3,14:17:39.12:483,39,0	1/1:12,35:47:83.93:1015,84,0	0/1:31,21:46:27.49:898,0,27	1/1:2,30:33:62.98:731,63,0	1/1:14,32:43:79.31:1131,79,0	1/1:4,15:19:2.73:342,3,0	1/1:7,39:46:99:1337,108,0	1/1:10,30:39:93.29:1149,93,0	1/1:2,29:31:57.18:706,57,0	1/1:11,27:34:25.17:602,25,0	1/1:7,24:32:45.56:610,46,0	1/1:7,24:31:60.19:740,60,0	1/1:13,28:40:7.44:787,7,0	1/1:13,17:22:28.61:521,29,0	1/1:6,22:29:62.99:740,63,0	1/1:36,83:116:99:2156,169,0	1/1:6,29:36:60.02:719,60,0	1/1:2,20:22:45.11:541,45,0	1/1:11,64:76:99:1785,144,0	1/1:3,20:23:41.36:520,41,0	1/1:9,28:36:78.07:937,78,0	1/1:5,17:21:36.11:446,36,0	1/1:2,16:18:46.20:592,46,0
chr10	42365952	.	ATG	A	6699.79	PASS	AB=0.875;AC=29;AF=0.518;AN=56;BaseQRankSum=5.518;DP=1121;FS=1.042;HRun=0;HaplotypeScore=185.1208;InbreedingCoeff=0.6031;MQ=48.37;MQ0=76;MQRankSum=-1.836;QD=11.15;ReadPosRankSum=0.663;VQSLOD=4.2919;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:29:0.16:22,0,0	1/1:9,0:14:3.89:71,4,0	0/0:94,0:12:12.04:0,12,180	0/0:94,0:11:15.04:0,15,224	0/0:18,0:29:39.05:0,39,470	0/0:30,0:29:47.18:0,47,742	0/0:43,1:43:54.13:0,54,1324	0/1:52,17:60:4.99:480,0,5	0/0:16,0:26:41.97:0,42,431	1/1:25,23:43:16.29:760,16,0	1/1:14,5:18:11.97:116,12,0	0/1:40,3:38:20.12:20,0,1084	0/1:27,1:28:5.65:6,0,660	0/0:42,0:41:62.31:0,62,1069	1/1:13,19:31:38.52:442,39,0	0/0:11,0:24:51:0,51,507	0/0:38,1:39:52.31:0,52,1240	1/1:8,9:16:34.07:426,34,0	1/1:41,7:19:15.92:288,16,0	1/1:16,11:25:39.12:469,39,0	1/1:57,56:102:99:2017,135,0	0/1:28,2:29:18.17:18,0,704	0/0:26,1:27:2.20:0,2,797	0/0:65,2:67:29.69:0,30,1840	1/1:9,9:16:23.80:270,24,0	0/1:17,9:22:3.08:434,0,3	1/1:7,7:14:30.07:348,30,0	1/1:4,13:17:44.97:513,45,0
chr10	42365979	.	A	ATG	4671.15	PASS	AB=0.800;AC=19;AF=0.339;AN=56;BaseQRankSum=9.389;DP=966;FS=7.661;HRun=0;HaplotypeScore=193.6354;InbreedingCoeff=0.8471;MQ=47.00;MQ0=40;MQRankSum=-9.363;QD=21.04;ReadPosRankSum=-2.693;VQSLOD=4.0393;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,0:19:30.75:252,31,0	1/1:13,1:17:5.17:271,5,0	0/0:94,0:11:19.57:0,20,189	0/0:105,1:10:13.96:0,14,117	1/1:9,19:28:30.10:494,30,0	0/0:17,0:17:42.12:0,42,525	0/0:49,0:49:99:0,117,1470	0/0:42,0:36:73.77:0,74,974	1/1:10,14:23:36.12:599,36,0	1/1:21,23:41:96.31:1537,96,0	1/1:4,8:12:6.02:101,6,0	0/0:36,0:34:52.24:0,52,857	0/0:22,0:22:28.27:0,28,512	0/0:33,0:33:75.23:0,75,943	1/1:10,18:27:20.94:322,21,0	1/1:11,12:23:6.54:635,7,0	0/0:28,0:28:53.25:0,53,852	0/1:9,3:12:15.75:228,0,16	0/0:22,0:16:7.62:0,8,334	0/0:19,0:19:57.17:0,57,718	0/0:109,0:105:99:0,250,3107	0/0:24,0:24:60.14:0,60,737	0/0:22,0:22:60.19:0,60,772	0/0:56,0:56:99:0,135,1719	1/1:5,7:12:15.05:232,15,0	0/0:28,1:29:10.96:0,11,662	0/0:15,0:15:39.13:0,39,502	0/0:15,0:15:36.12:0,36,463
chr10	42366006	.	G	GGT	1610.23	PASS	AB=0.762;AC=10;AF=0.179;AN=56;BaseQRankSum=3.729;DP=956;FS=0.000;HRun=0;HaplotypeScore=196.4759;InbreedingCoeff=0.5098;MQ=48.45;MQ0=41;MQRankSum=-4.796;QD=11.75;ReadPosRankSum=-1.382;VQSLOD=3.0856;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:15,0:20:13.53:16,0,14	0/1:12,0:14:3.12:33,0,3	0/0:107,0:14:8.99:0,9,88	0/0:105,0:9:7.62:0,8,87	0/0:26,0:26:18.04:0,18,204	0/0:18,0:18:42.07:0,42,482	0/0:54,0:55:99:0,114,1330	0/0:36,0:32:35.03:0,35,522	0/0:21,0:21:42.03:0,42,453	1/1:27,18:43:41.91:1117,42,0	0/1:6,5:11:18.98:109,0,19	0/0:29,0:28:63.13:0,63,732	0/0:22,0:22:38.56:0,39,450	0/0:32,0:30:57.11:0,57,653	1/1:15,8:23:11.95:178,12,0	0/0:20,0:20:26.60:0,27,344	0/0:23,0:23:51.13:0,51,594	0/1:8,4:12:14.71:238,0,15	0/0:16,0:14:21.06:0,21,246	0/0:25,0:26:27.14:0,27,535	0/0:117,0:116:99:0,225,2619	0/0:26,0:25:12.81:0,13,543	0/0:23,0:23:48.14:0,48,574	0/0:56,0:56:99:0,128,1499	1/1:4,5:10:6.01:73,6,0	0/0:24,0:24:60.01:0,60,703	0/0:19,0:18:45.14:0,45,546	0/0:12,0:12:18.05:0,18,216
chr10	42366025	.	AGTGT	A	1265.16	PASS	AB=0.902;AC=9;AF=0.161;AN=56;BaseQRankSum=4.828;DP=936;FS=0.000;HRun=0;HaplotypeScore=191.3261;InbreedingCoeff=0.5789;MQ=46.02;MQ0=45;MQRankSum=-0.482;QD=11.82;ReadPosRankSum=-0.735;VQSLOD=2.8533;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:17,3:18:9.88:110,0,10	0/1:7,1:8:7.64:44,0,8	0/0:86,0:7:8.60:0,9,123	0/0:102,0:8:3.01:0,3,65	1/1:5,21:27:23.88:405,24,0	0/0:23,0:23:54.15:0,54,1188	0/0:52,0:52:99:0,114,2566	0/0:52,0:38:73.40:0,73,1563	1/1:10,9:18:30.08:478,30,0	0/0:39,0:38:82.71:0,83,1613	0/0:14,0:15:30.09:0,30,660	0/0:27,0:25:56.11:0,56,1401	0/0:23,0:23:54.17:0,54,1290	0/0:30,0:28:50.83:0,51,1156	0/1:17,1:18:8.41:8,0,478	1/1:5,9:14:7.85:372,8,0	0/0:24,0:24:56.92:0,57,1199	0/0:17,0:16:31:0,31,730	0/0:15,0:11:14.97:0,15,196	0/0:19,0:20:44.93:0,45,987	0/0:118,0:114:99:0,222,4863	0/0:21,0:20:48.15:0,48,1144	0/0:20,0:20:30.07:0,30,638	0/0:66,0:66:99:0,126,2848	0/0:12,0:12:13.60:0,14,298	0/0:29,0:30:77.26:0,77,1647	0/0:19,0:17:45.02:0,45,881	0/0:10,0:10:18.06:0,18,447
chr10	42366139	.	G	GGT	1995.45	PASS	AB=0.977;AC=37;AF=0.740;AN=50;BaseQRankSum=-1.753;DP=1041;FS=2.378;HRun=0;HaplotypeScore=162.4189;InbreedingCoeff=0.2443;MQ=38.07;MQ0=187;MQRankSum=1.316;QD=2.48;ReadPosRankSum=0.532;VQSLOD=2.9051;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:21:8.90:99,9,0	1/1:16,0:12:1.72:5,2,0	./.	./.	1/1:24,0:20:5.42:23,5,0	1/1:28,0:22:11.48:74,11,0	1/1:39,0:35:14.41:147,14,0	1/1:62,0:39:1.25:3,1,0	1/1:22,1:21:5.98:188,6,0	0/1:59,0:37:0.07:0,0,15	0/0:11,0:13:2.27:0,2,13	0/1:35,1:28:23.82:105,0,24	0/1:30,0:25:4.55:63,0,5	1/1:41,1:40:8.85:90,9,0	0/0:34,0:25:2.74:0,3,14	1/1:27,0:24:9.07:111,9,0	1/1:32,0:30:5.58:182,6,0	0/0:25,0:21:8.52:0,9,42	./.	1/1:23,4:22:2.82:44,3,0	0/1:125,3:97:66.10:338,0,66	1/1:18,1:12:12.03:148,12,0	1/1:20,0:16:5.75:45,6,0	1/1:44,2:45:24.01:286,24,0	0/0:26,0:22:1.89:0,2,13	0/1:52,1:34:8.07:43,0,8	1/1:19,5:18:9.03:133,9,0	1/1:13,0:10:1.55:4,2,0
chr10	42367564	.	TTC	T	1520.82	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.750;DP=726;FS=12.961;HRun=0;HaplotypeScore=97.2601;InbreedingCoeff=0.9721;MQ=87.12;MQ0=3;MQRankSum=-5.074;QD=28.69;ReadPosRankSum=1.901;VQSLOD=4.9585;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,30:37:84.27:1069,84,0	1/1:0,16:15:45.14:573,45,0	0/0:45,0:35:32.76:0,33,940	0/0:75,0:57:81.53:0,82,1453	0/0:34,0:34:93.32:0,93,1553	0/0:28,0:28:81.28:0,81,1338	0/0:18,1:19:9.96:0,10,715	0/0:40,0:40:99:0,105,1684	0/0:23,0:23:63.22:0,63,1051	0/0:21,1:22:18.99:0,19,859	0/0:36,0:36:90.27:0,90,1414	0/0:25,0:25:72.25:0,72,1191	0/0:18,0:18:48.16:0,48,796	0/0:17,0:17:48.15:0,48,774	0/0:15,0:15:39.13:0,39,650	0/0:23,0:23:51.17:0,51,841	0/0:15,0:15:42.14:0,42,697	0/0:18,0:18:42.12:0,42,656	0/0:16,0:16:39:0,39,616	0/0:25,0:25:63.22:0,63,1054	0/0:30,0:30:75.26:0,75,1246	0/0:27,0:27:72.22:0,72,1155	0/0:31,0:31:81.28:0,81,1332	0/0:20,0:20:48.16:0,48,803	0/0:16,0:16:36.12:0,36,577	0/0:12,0:12:33.11:0,33,552	0/0:29,0:29:84.29:0,84,1399	0/0:14,0:14:33.10:0,33,526
chr10	42370150	.	TGC	T	1164.19	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=9.116;DP=555;FS=1.444;HRun=0;HaplotypeScore=77.7153;InbreedingCoeff=0.7806;MQ=68.76;MQ0=2;MQRankSum=-3.236;QD=16.17;ReadPosRankSum=1.992;VQSLOD=3.6639;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,37:38:66.22:1009,66,0	1/1:1,9:10:20.95:266,21,0	0/1:23,0:19:17.83:18,0,621	0/0:26,0:19:35.81:0,36,620	0/0:26,0:26:78.19:0,78,1316	0/0:21,0:21:62.91:0,63,1099	0/0:17,0:17:45.09:0,45,727	0/0:22,0:22:66.03:0,66,1079	0/0:17,0:17:48.15:0,48,881	0/0:29,0:29:87.28:0,87,1563	0/0:20,0:20:56.22:0,56,997	0/0:18,0:18:51.13:0,51,894	0/0:17,0:17:51.04:0,51,907	0/0:13,0:13:38.87:0,39,701	0/0:14,0:14:42.05:0,42,715	0/0:18,0:18:48.11:0,48,854	0/0:12,0:12:35.86:0,36,619	0/0:26,0:26:75.17:0,75,1290	0/0:27,0:27:66.85:0,67,1127	0/0:18,0:18:45.14:0,45,783	0/0:18,0:18:53.77:0,54,846	0/0:9,0:9:27.09:0,27,520	0/0:26,0:26:78.20:0,78,1318	0/0:12,0:12:33.11:0,33,617	0/0:18,0:18:51.13:0,51,904	0/0:20,0:20:60.07:0,60,989	0/0:24,0:24:72.14:0,72,1269	0/0:15,0:15:45.11:0,45,826
chr10	42371786	.	TC	T	700	PASS	AB=0.730;AC=13;AF=0.241;AN=54;BaseQRankSum=-2.413;DP=319;FS=1.098;HRun=9;HaplotypeScore=69.9033;InbreedingCoeff=0.3556;MQ=38.92;MQ0=1;MQRankSum=1.724;QD=6.09;ReadPosRankSum=-0.012;VQSLOD=0.7569;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,12:16:23.94:204,24,0	1/1:0,1:1:3:27,3,0	0/0:15,0:8:16.96:0,17,146	0/0:9,0:5:14.97:0,15,145	0/1:10,0:15:0.28:5,0,0	0/0:12,0:11:15.01:0,15,111	0/0:17,0:17:15.33:0,15,162	0/0:9,0:9:8.94:0,9,73	0/0:4,0:10:1.77:0,2,22	0/1:10,6:15:23.56:179,0,24	0/1:9,7:16:7.40:23,0,7	0/0:12,0:11:8.46:0,8,71	0/0:14,0:14:27.02:0,27,244	0/0:10,0:10:6.23:0,6,34	1/1:4,6:9:0.42:91,0,0	0/0:12,0:13:2.93:0,3,27	1/1:5,9:14:17.68:189,18,0	0/1:6,5:11:33.67:86,0,34	0/0:6,0:6:13.75:0,14,75	0/0:10,0:8:2.40:0,2,9	0/0:17,0:17:5.21:0,5,26	0/0:15,0:14:16.44:0,16,123	0/0:6,0:5:8.98:0,9,89	0/0:12,1:13:12.36:0,12,136	0/1:11,4:14:3.40:46,0,3	0/0:9,0:8:17.35:0,17,103	0/0:5,0:5:6.16:0,6,30	./.
chr10	42371788	.	C	CT	93.55	PASS	AB=0.874;AC=12;AF=0.222;AN=54;BaseQRankSum=4.107;DP=338;FS=1.104;HRun=0;HaplotypeScore=77.7647;InbreedingCoeff=-0.2590;MQ=39.80;MQ0=1;MQRankSum=-2.309;QD=0.65;ReadPosRankSum=3.630;VQSLOD=1.3790;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:18:29.44:0,29,148	0/0:1,0:1:2.92:0,3,17	0/0:17,0:9:17.91:0,18,190	0/0:8,0:5:14.55:0,15,151	0/1:17,0:17:13.45:13,0,21	0/1:11,1:11:4.76:5,0,143	0/0:15,3:18:16.34:0,16,206	0/0:10,0:10:9.37:0,9,79	0/1:8,3:10:11.99:12,0,22	0/1:16,3:18:31.71:32,0,128	0/0:15,1:16:11.58:0,12,68	0/0:12,1:12:11.12:0,11,102	0/0:13,2:15:18.10:0,18,266	0/1:8,2:10:5.40:5,0,31	0/0:11,0:10:20.09:0,20,124	0/1:12,2:14:35.72:49,0,36	0/0:15,0:15:22.71:0,23,136	0/1:11,1:12:20.85:21,0,109	0/1:4,2:6:30.44:33,0,30	0/1:9,1:8:2.33:2,0,17	0/1:18,0:18:7.93:8,0,30	0/0:13,2:14:19.32:0,19,154	0/0:6,0:5:8.81:0,9,102	0/0:13,0:13:11.87:0,12,165	0/0:15,0:14:12.15:0,12,76	0/1:8,2:9:30.14:30,0,67	0/1:4,1:5:10.79:21,0,11	./.
chr10	42371809	.	T	TAC	901.73	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-0.784;DP=366;FS=6.900;HRun=0;HaplotypeScore=77.6543;InbreedingCoeff=0.7357;MQ=57.01;MQ0=1;MQRankSum=-0.335;QD=26.52;ReadPosRankSum=-0.270;VQSLOD=4.5036;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:10,23:33:60.12:975,60,0	1/1:0,1:1:3.01:36,3,0	0/0:24,0:14:19.58:0,20,244	0/0:17,0:12:30.77:0,31,341	0/0:17,0:17:33.11:0,33,419	0/0:14,0:14:30.08:0,30,367	0/0:18,0:18:27.09:0,27,343	0/0:5,0:5:12.04:0,12,152	0/0:10,0:10:15.05:0,15,191	0/0:21,0:21:60.19:0,60,753	0/0:8,0:8:12.04:0,12,152	0/0:7,0:7:15.05:0,15,190	0/0:10,0:10:30.10:0,30,381	0/0:8,0:8:12.04:0,12,152	0/0:14,0:14:30.08:0,30,367	0/0:10,0:10:27.07:0,27,330	0/0:19,0:19:42.13:0,42,534	0/0:15,0:15:36.12:0,36,457	0/0:5,0:5:12.04:0,12,150	0/0:6,0:6:18.06:0,18,228	0/0:25,0:25:42.09:0,42,515	0/0:17,0:17:23.84:0,24,278	0/0:14,0:14:34.51:0,35,455	0/0:18,0:18:39.11:0,39,491	0/0:11,0:11:24.08:0,24,305	0/0:10,0:10:21.06:0,21,257	0/0:7,0:7:12.04:0,12,153	0/0:1,0:1:3.01:0,3,38
chr10	42372614	.	C	CAT	12429	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-12.045;DP=478;FS=2.468;HRun=0;HaplotypeScore=55.0399;InbreedingCoeff=0.9857;MQ=70.59;MQ0=2;MQRankSum=0.042;QD=37.66;ReadPosRankSum=2.099;VQSLOD=6.9587;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,24:32:66.23:1112,66,0	1/1:0,5:5:12.04:204,12,0	0/0:18,0:15:21.78:0,22,237	0/0:20,0:11:9.93:0,10,114	1/1:4,22:25:42.14:714,42,0	0/0:19,0:19:48.14:0,48,609	0/0:11,0:11:21.05:0,21,258	1/1:7,29:36:87.30:1466,87,0	1/1:2,13:15:33.11:561,33,0	1/1:1,13:14:36.12:600,36,0	1/1:6,19:25:55.43:921,55,0	0/0:16,0:16:39.11:0,39,493	0/0:12,0:12:33.09:0,33,415	0/0:17,0:17:51.17:0,51,663	1/1:0,14:14:30.10:510,30,0	1/1:1,11:13:33.11:554,33,0	1/1:3,14:16:39.13:663,39,0	1/1:0,12:12:27.09:459,27,0	1/1:6,8:15:27.07:418,27,0	1/1:3,17:20:48.16:816,48,0	1/1:6,14:20:42.14:698,42,0	0/0:7,0:7:21.07:0,21,272	0/0:18,0:18:54.16:0,54,685	0/0:10,0:10:30.08:0,30,376	1/1:1,22:23:57.20:970,57,0	1/1:1,16:17:45.15:749,45,0	1/1:2,13:15:33.11:554,33,0	1/1:0,11:11:27.09:459,27,0
chr10	42375310	.	CG	C	10153.36	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=14.568;DP=685;FS=9.103;HRun=3;HaplotypeScore=67.3093;InbreedingCoeff=1.0000;MQ=83.33;MQ0=1;MQRankSum=-3.962;QD=34.30;ReadPosRankSum=-0.679;VQSLOD=4.7503;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,117,1684	0/0:13,0:13:36.12:0,36,518	0/0:19,0:19:51.15:0,51,677	0/0:19,0:19:51.16:0,51,697	0/0:28,0:28:78.26:0,78,1122	0/0:19,0:19:54.18:0,54,777	0/0:15,0:15:45.14:0,45,631	1/1:2,29:31:78.19:937,78,0	0/0:29,0:29:78.26:0,78,1122	1/1:0,33:33:93.26:1127,93,0	1/1:1,29:30:81.25:1004,81,0	0/0:28,0:28:81.27:0,81,1164	0/0:26,0:26:75.25:0,75,1079	0/0:27,0:27:75.24:0,75,1060	1/1:0,17:17:48.15:595,48,0	0/0:23,0:22:60.19:0,60,845	0/0:32,0:32:90.25:0,90,1239	1/1:0,25:25:72.21:878,72,0	1/1:0,12:12:36.11:446,36,0	1/1:1,31:32:93.29:1152,93,0	1/1:0,18:18:54.17:669,54,0	0/0:29,0:29:87.28:0,87,1233	0/0:23,0:23:69.23:0,69,992	0/0:19,0:19:57.19:0,57,821	1/1:1,27:28:78.25:967,78,0	1/1:2,27:29:78.24:966,78,0	1/1:2,25:27:75.24:929,75,0	1/1:0,14:14:39.12:483,39,0
chr10	42375375	.	A	AAT	2193.74	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=-8.613;DP=645;FS=10.154;HRun=0;HaplotypeScore=88.9571;InbreedingCoeff=0.8306;MQ=71.64;MQ0=1;MQRankSum=-0.674;QD=28.49;ReadPosRankSum=-0.687;VQSLOD=4.7131;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:96.29:0,96,1229	0/0:12,0:12:33.11:0,33,429	0/0:8,0:8:12.04:0,12,155	0/1:16,0:15:16.46:16,0,106	1/1:1,24:26:69.17:1124,69,0	0/0:19,0:19:54.18:0,54,702	0/0:15,0:15:42.14:0,42,545	0/0:36,0:36:90.29:0,90,1170	1/1:3,16:19:42.14:692,42,0	0/0:34,0:34:90.27:0,90,1139	0/0:33,0:33:81.24:0,81,1025	0/0:23,0:23:54.14:0,54,680	0/0:22,0:22:57.19:0,57,741	0/0:26,0:26:75.24:0,75,962	0/0:21,0:21:54.15:0,54,676	1/1:2,14:15:30.10:510,30,0	0/0:28,0:28:75.22:0,75,958	0/0:21,0:21:51.13:0,51,644	0/0:17,0:17:48.13:0,48,598	0/0:32,0:32:84.26:0,84,1065	0/0:12,0:12:33.10:0,33,416	0/0:30,0:30:78.20:0,78,960	0/0:23,0:23:63.19:0,63,803	0/0:21,0:21:57.17:0,57,727	0/0:27,0:27:69.22:0,69,897	0/0:30,0:30:87.25:0,87,1093	0/0:31,0:31:78.24:0,78,1001	0/0:9,0:9:24.08:0,24,312
chr10	42376304	.	GCA	G	13471.42	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=14.783;DP=727;FS=9.464;HRun=0;HaplotypeScore=91.5466;InbreedingCoeff=0.9987;MQ=73.98;MQ0=2;MQRankSum=-3.129;QD=30.34;ReadPosRankSum=2.841;VQSLOD=6.2841;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,26:30:69.22:887,69,0	1/1:2,7:9:21.07:270,21,0	0/0:28,1:27:30.84:0,31,984	0/0:25,0:23:53.86:0,54,802	1/1:3,30:33:78.25:997,78,0	0/0:40,0:40:83.74:0,84,1590	0/0:24,0:24:63.20:0,63,1034	1/1:7,23:30:69.03:830,69,0	1/1:2,25:27:63.20:810,63,0	1/1:3,26:29:75.19:941,75,0	1/1:2,22:24:42.14:539,42,0	0/0:30,0:30:72.23:0,72,1183	0/0:27,1:28:36.72:0,37,1175	0/0:32,0:32:90.31:0,90,1501	1/1:1,18:19:48.16:617,48,0	1/1:1,27:28:81.26:1042,81,0	1/1:3,22:24:48.16:617,48,0	1/1:2,15:17:42.14:540,42,0	1/1:0,18:18:54.17:688,54,0	1/1:3,26:29:69.22:885,69,0	1/1:4,17:21:39.13:501,39,0	0/0:27,0:27:69.23:0,69,1145	0/0:28,0:28:81.28:0,81,1346	0/0:20,0:20:54.16:0,54,876	1/1:3,33:36:93.30:1196,93,0	1/1:5,24:29:72.17:878,72,0	1/1:4,26:30:75.24:964,75,0	1/1:1,8:9:21.07:270,21,0
chr10	42377701	.	C	CT	3630.06	PASS	AB=0.797;AC=25;AF=0.446;AN=56;BaseQRankSum=-5.635;DP=456;FS=2.445;HRun=11;HaplotypeScore=61.9581;InbreedingCoeff=0.4998;MQ=62.47;MQ0=3;MQRankSum=-1.614;QD=14.35;ReadPosRankSum=-2.464;VQSLOD=3.3844;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,1:30:63.02:346,63,0	0/1:8,2:10:33.98:34,0,136	0/1:9,0:7:13.34:13,0,35	0/1:9,0:7:31.91:32,0,54	1/1:6,11:18:1.24:314,1,0	0/0:11,0:12:31.92:0,32,238	0/0:10,0:11:18.97:0,19,126	1/1:7,21:28:63.01:593,63,0	0/1:5,8:13:2.20:162,0,2	0/0:6,0:19:24.42:0,24,71	0/0:5,0:23:26.45:0,26,77	0/0:15,0:15:29.82:0,30,230	0/1:11,1:12:4.49:4,0,142	0/0:14,0:14:35.86:0,36,278	0/0:3,0:12:16.29:0,16,47	1/1:5,6:12:20.62:178,21,0	0/1:7,15:22:24.62:320,0,25	0/0:4,0:13:20.37:0,20,59	0/1:5,7:14:10.74:236,0,11	1/1:10,8:18:12.65:279,13,0	1/1:2,7:9:18.04:183,18,0	0/0:9,0:10:21.78:0,22,150	0/0:23,0:23:47.76:0,48,367	0/0:19,0:20:40.59:0,41,307	0/0:3,0:27:44.80:0,45,129	1/1:6,9:16:9.60:246,10,0	1/1:6,15:20:42.04:416,42,0	1/1:2,9:11:27.05:274,27,0
chr10	42378306	.	TCACACACACACACACACA	T	1594.81	PASS	AB=0.800;AC=8;AF=0.154;AN=52;BaseQRankSum=5.043;DP=522;FS=0.000;HRun=0;HaplotypeScore=240.0059;InbreedingCoeff=0.3513;MQ=57.84;MQ0=8;MQRankSum=-3.256;QD=14.90;ReadPosRankSum=0.889;VQSLOD=2.2489;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:26:15.06:0,15,315	0/0:12,0:12:24.02:0,24,1144	0/0:34,0:22:30.10:0,30,1060	0/0:37,0:23:42.56:0,43,1569	./.	0/0:24,0:25:39.11:0,39,1435	0/0:17,0:17:25.86:0,26,863	0/1:27,0:25:28.27:28,0,156	1/1:6,12:22:6.01:177,6,0	0/0:15,0:14:31.65:0,32,1196	0/0:12,0:11:18.06:0,18,672	0/0:12,0:22:14.64:0,15,576	0/0:19,0:19:45.14:0,45,2037	0/0:15,0:16:24.05:0,24,586	0/0:22,0:20:29.81:0,30,1447	1/1:9,10:21:15.05:532,15,0	0/0:20,0:20:54.19:0,54,2516	0/0:14,0:14:27.09:0,27,1149	0/0:9,0:9:8.68:0,9,73	0/0:8,0:8:0:0,0,0	./.	0/0:9,0:9:15.05:0,15,767	0/0:15,0:15:24.08:0,24,805	0/0:34,0:34:54.15:0,54,2049	0/0:19,0:19:35.79:0,36,1297	0/1:7,0:12:99:414,0,237	0/1:11,0:13:99:389,0,150	0/1:5,0:9:99:189,0,373
chr10	42378341	.	CAGAGAGAG	C	69.59	PASS	AB=1.000;AC=3;AF=0.060;AN=50;BaseQRankSum=-0.167;DP=502;FS=0.000;HRun=0;HaplotypeScore=160.3377;InbreedingCoeff=0.4547;MQ=44.63;MQ0=11;MQRankSum=-1.268;QD=1.18;ReadPosRankSum=0.519;VQSLOD=2.7027;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:27:8.68:0,9,288	0/0:8,0:8:8.99:0,9,142	./.	./.	0/0:22,0:20:12.04:0,12,346	0/0:23,0:23:18.36:0,18,166	0/0:16,0:16:19.88:0,20,328	0/0:17,0:16:28.34:0,28,685	0/0:28,0:28:22.74:0,23,570	0/0:25,0:24:60.14:0,60,1727	0/0:15,0:14:13.38:0,13,288	0/0:24,0:23:18.06:0,18,436	1/1:15,8:23:8.49:123,8,0	0/0:22,0:21:36.12:0,36,1136	0/0:29,0:27:24.02:0,24,825	0/0:23,0:22:14.84:0,15,419	0/0:23,0:22:30.99:0,31,1048	0/0:12,0:12:19.62:0,20,478	0/0:8,0:6:12.04:0,12,247	0/0:9,0:7:0.47:0,0,1	./.	0/0:16,0:16:27.09:0,27,787	0/0:13,0:11:3.37:0,3,8	0/1:36,0:36:41.08:41,0,104	0/0:24,0:23:17.98:0,18,605	0/0:14,0:13:17.75:0,18,441	0/0:13,0:10:11.57:0,12,351	0/0:10,0:9:12.04:0,12,369
chr10	42380627	.	CAAAACA	C	8146.31	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=13.617;DP=641;FS=2.531;HRun=0;HaplotypeScore=143.7663;InbreedingCoeff=0.9162;MQ=65.27;MQ0=4;MQRankSum=-10.904;QD=21.90;ReadPosRankSum=1.157;VQSLOD=4.5239;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:27:15.05:190,15,0	1/1:3,4:7:5.75:119,6,0	0/0:32,0:27:13.57:0,14,237	0/0:29,0:19:6.02:0,6,148	1/1:8,0:32:45.06:575,45,0	0/0:21,0:21:48.16:0,48,1514	0/0:29,0:29:60.19:0,60,1708	1/1:15,4:19:12.02:146,12,0	1/1:4,0:16:18.04:232,18,0	1/1:12,17:29:51.17:1013,51,0	1/1:8,10:18:30.02:529,30,0	0/0:16,0:16:30.10:0,30,972	0/0:20,0:20:30.10:0,30,908	0/0:21,0:21:39.12:0,39,1055	1/1:12,18:30:30.10:600,30,0	1/1:9,0:23:33.07:439,33,0	0/0:38,0:38:60.21:0,60,1875	1/1:9,7:15:14.96:237,15,0	1/1:14,10:22:30.09:569,30,0	1/1:10,15:25:36.12:690,36,0	1/1:11,2:13:3.01:32,3,0	0/0:14,0:14:27.09:0,27,838	0/0:22,0:22:30.10:0,30,968	0/0:27,0:27:62.43:0,62,1768	1/1:3,16:19:39.13:788,39,0	1/1:12,14:26:44.94:834,45,0	1/1:17,26:43:51.18:1029,51,0	1/1:1,4:5:6.02:122,6,0
chr10	42381958	.	AG	A	996.04	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.710;DP=659;FS=7.930;HRun=1;HaplotypeScore=60.8010;InbreedingCoeff=0.9441;MQ=87.65;MQ0=0;MQRankSum=-0.708;QD=35.57;ReadPosRankSum=1.512;VQSLOD=3.5794;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,156,2443	0/0:9,0:9:27.08:0,27,404	0/0:22,0:22:60.13:0,60,913	0/0:24,0:24:64.10:0,64,1006	0/0:31,0:31:90.31:0,90,1439	0/0:17,0:17:51.16:0,51,792	0/0:21,0:21:63.21:0,63,1007	0/0:28,0:28:84.28:0,84,1321	0/0:19,0:19:57.19:0,57,911	0/0:24,0:24:72.25:0,72,1151	0/0:17,0:17:51.17:0,51,815	0/0:30,0:30:90.28:0,90,1393	0/0:28,0:28:84.27:0,84,1320	0/0:11,0:11:33.11:0,33,528	0/0:34,0:34:99:0,102,1628	0/0:25,0:25:75.24:0,75,1175	1/1:0,28:28:78.26:1091,78,0	0/0:14,0:14:42.14:0,42,671	0/0:31,0:31:93.28:0,93,1420	0/0:15,0:15:45.14:0,45,697	0/0:31,0:31:93.30:0,93,1463	0/0:22,0:22:66.23:0,66,1053	0/0:32,0:32:96.33:0,96,1532	0/0:20,0:20:60.20:0,60,959	0/0:30,0:30:90.27:0,90,1390	0/0:17,0:17:51.17:0,51,793	0/0:23,0:23:69.24:0,69,1103	0/0:4,0:4:9.03:0,9,144
chr10	42382033	.	CTATT	C	141.94	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.243;DP=590;FS=0.000;HRun=0;HaplotypeScore=95.2068;InbreedingCoeff=0.8742;MQ=85.72;MQ0=1;MQRankSum=-1.174;QD=23.66;ReadPosRankSum=-0.361;VQSLOD=3.2582;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,129,3391	1/1:0,6:6:12.04:228,12,0	0/0:16,0:16:45.15:0,45,1185	0/0:23,0:23:58.90:0,59,1485	0/0:31,0:30:87.30:0,87,2333	0/0:22,0:22:63.22:0,63,1689	0/0:17,0:17:48.16:0,48,1285	0/0:29,0:29:84.29:0,84,2257	0/0:15,0:15:45.15:0,45,1215	0/0:13,0:13:39.13:0,39,1043	0/0:21,0:21:60.21:0,60,1606	0/0:24,0:24:72.25:0,72,1846	0/0:26,0:26:78.26:0,78,2036	0/0:20,0:20:57.20:0,57,1493	0/0:23,0:23:66.23:0,66,1747	0/0:20,0:20:60.20:0,60,1566	0/0:21,0:21:57.20:0,57,1539	0/0:15,0:15:45.15:0,45,1174	0/0:28,0:28:81.28:0,81,2152	0/0:24,0:24:72.25:0,72,1872	0/0:25,0:24:69.22:0,69,1757	0/0:19,0:19:57.20:0,57,1492	0/0:29,0:29:81.27:0,81,2086	0/0:18,0:18:54.17:0,54,1363	0/0:17,0:17:51.18:0,51,1321	0/0:14,0:14:42.14:0,42,1099	0/0:28,0:28:81.26:0,81,2131	0/0:2,0:2:6.02:0,6,162
chr10	42382127	.	C	CAT	8377.44	PASS	AB=0.637;AC=20;AF=0.357;AN=56;BaseQRankSum=-14.366;DP=457;FS=30.987;HRun=0;HaplotypeScore=52.0943;InbreedingCoeff=0.5639;MQ=68.54;MQ0=3;MQRankSum=1.842;QD=35.20;ReadPosRankSum=-1.041;VQSLOD=3.3803;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:96.31:0,96,1210	0/0:11,0:11:27:0,27,340	0/1:11,0:11:8.45:8,0,65	0/0:11,0:9:5.67:0,6,65	0/0:27,0:27:72.22:0,72,895	0/0:18,0:18:51.10:0,51,599	0/0:9,0:9:24.08:0,24,303	1/1:2,24:26:72.25:1194,72,0	0/0:9,0:9:24.08:0,24,302	0/1:5,18:24:32.22:841,0,32	1/1:3,12:15:36.12:596,36,0	0/0:13,0:13:36.12:0,36,454	0/0:15,0:15:33.11:0,33,416	0/0:7,0:7:18.06:0,18,227	1/1:2,16:18:39.13:648,39,0	0/0:9,0:9:24.08:0,24,303	0/0:11,0:11:27.09:0,27,337	1/1:1,12:13:36.12:588,36,0	0/1:6,8:14:10.77:372,0,11	0/1:6,17:24:99:782,0,123	0/1:4,12:16:68.41:553,0,68	0/0:13,0:13:33.11:0,33,416	0/0:19,0:19:48.15:0,48,606	0/0:9,0:9:15.03:0,15,175	1/1:3,20:23:21.80:815,22,0	0/1:3,11:14:1.76:484,0,2	1/1:1,24:24:60.21:997,60,0	1/1:1,12:13:30.10:498,30,0
chr10	42383227	.	ACT	A	124.20	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.131;DP=426;FS=4.761;HRun=0;HaplotypeScore=61.5952;InbreedingCoeff=0.6353;MQ=74.65;MQ0=16;MQRankSum=1.518;QD=10.35;ReadPosRankSum=-0.619;VQSLOD=2.4687;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:33.09:0,33,600	0/0:9,0:9:18.05:0,18,329	0/0:47,0:22:57.43:0,57,909	0/0:41,0:23:2.36:0,2,731	0/0:14,0:13:29.10:0,29,529	0/0:20,0:20:54.17:0,54,949	0/0:14,0:14:30.09:0,30,531	0/0:22,0:21:54.18:0,54,990	0/0:10,0:10:27.09:0,27,501	0/0:17,0:17:42.14:0,42,740	0/0:14,0:13:33.11:0,33,581	0/0:8,0:8:24.08:0,24,443	0/0:17,0:17:51.16:0,51,895	0/0:12,0:12:24.07:0,24,418	0/0:17,0:16:45.15:0,45,819	0/0:7,0:7:18.06:0,18,329	1/1:0,12:12:15.05:212,15,0	0/0:1,0:1:3.01:0,3,56	0/0:14,0:14:36.07:0,36,563	0/0:21,0:21:51.17:0,51,955	0/0:4,0:4:6.02:0,6,112	0/0:16,0:16:45.15:0,45,834	0/0:15,0:15:39.09:0,39,725	0/0:13,0:12:30.10:0,30,562	0/0:18,0:18:30.06:0,30,469	0/0:11,0:11:33.11:0,33,608	0/0:7,0:7:15.05:0,15,281	0/0:11,0:10:18.06:0,18,320
chr10	42383260	.	A	AC	622.81	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=-0.814;DP=636;FS=4.848;HRun=1;HaplotypeScore=71.6573;InbreedingCoeff=0.3940;MQ=58.36;MQ0=9;MQRankSum=-1.145;QD=5.51;ReadPosRankSum=-1.730;VQSLOD=-0.1482;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:76.14:0,76,471	0/0:6,0:6:14.62:0,15,100	0/0:41,0:13:32.13:0,32,259	0/0:27,0:7:8.96:0,9,73	0/0:38,0:32:68.48:0,68,430	0/0:24,0:23:47.39:0,47,323	0/0:18,0:18:44.72:0,45,368	0/0:34,0:33:90.36:0,90,680	0/0:13,0:12:28.38:0,28,199	0/1:28,0:28:4.93:333,0,5	1/1:11,14:25:5.18:81,5,0	0/0:19,0:19:40.85:0,41,311	0/0:13,0:13:20.96:0,21,173	0/0:14,0:13:32.89:0,33,265	0/1:21,0:19:57.82:142,0,58	0/0:21,0:20:44.41:0,44,291	0/0:20,0:20:56.74:0,57,448	1/1:1,3:4:2.96:19,3,0	0/0:22,0:21:51.99:0,52,355	0/0:42,0:42:95.99:0,96,612	0/0:7,0:7:5.74:0,6,38	0/0:8,0:8:20.09:0,20,141	0/0:22,0:23:56.72:0,57,424	0/0:22,0:21:38.60:0,39,252	0/1:35,0:35:62.90:172,0,63	0/0:39,0:39:59.52:0,60,555	0/0:27,0:24:54.05:0,54,374	0/0:7,0:7:12.56:0,13,78
chr10	42384372	.	TGA	T	301.50	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.849;DP=645;FS=0.000;HRun=0;HaplotypeScore=80.1257;InbreedingCoeff=0.9783;MQ=80.67;MQ0=0;MQRankSum=-5.655;QD=23.19;ReadPosRankSum=3.402;VQSLOD=4.1165;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:96.33:0,96,1909	0/0:9,0:9:24.08:0,24,487	0/0:20,0:20:60.18:0,60,1116	0/0:16,0:16:45.15:0,45,845	0/0:31,0:31:93.32:0,93,1868	0/0:21,0:21:60.21:0,60,1217	0/0:27,0:27:81.28:0,81,1632	0/0:24,0:24:72.25:0,72,1453	0/0:24,0:24:72.23:0,72,1427	0/0:32,0:32:93.32:0,93,1881	0/0:28,0:28:81.28:0,81,1640	0/0:18,0:18:54.19:0,54,1091	0/0:22,0:22:66.23:0,66,1338	0/0:17,0:17:51.17:0,51,1024	0/0:27,0:27:78.27:0,78,1572	0/0:30,0:30:90.31:0,90,1813	1/1:0,13:13:36.02:396,36,0	0/0:7,0:7:21.03:0,21,362	0/0:18,0:18:54.18:0,54,1045	0/0:37,0:37:99:0,108,2174	0/0:31,0:31:93.32:0,93,1875	0/0:23,0:23:69.24:0,69,1400	0/0:17,0:17:47.90:0,48,940	0/0:22,0:22:66.23:0,66,1330	0/0:26,0:26:78.27:0,78,1558	0/0:36,0:36:99:0,108,2066	0/0:31,0:31:93.31:0,93,1835	0/0:6,0:6:15:0,15,242
chr10	42384375	.	TTCA	T	131.62	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.412;DP=646;FS=1.263;HRun=0;HaplotypeScore=94.2920;InbreedingCoeff=0.9866;MQ=80.62;MQ0=0;MQRankSum=-5.013;QD=10.12;ReadPosRankSum=3.020;VQSLOD=3.3428;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:99:0,99,2341	0/0:9,0:9:27.09:0,27,643	0/0:21,0:21:63.13:0,63,1417	0/0:15,0:15:45.15:0,45,1042	0/0:30,0:30:90.27:0,90,2106	0/0:21,0:21:60.21:0,60,1451	0/0:27,0:27:81.28:0,81,1972	0/0:22,0:22:66.23:0,66,1603	0/0:24,0:24:72.25:0,72,1761	0/0:32,0:32:93.31:0,93,2221	0/0:28,0:28:81.28:0,81,1944	0/0:19,0:19:57.19:0,57,1306	0/0:22,0:22:66.23:0,66,1602	0/0:20,0:20:60.21:0,60,1462	0/0:26,0:26:78.25:0,78,1874	0/0:32,0:32:96.33:0,96,2303	1/1:0,13:13:29.85:226,30,0	0/0:7,0:7:21.07:0,21,517	0/0:18,0:18:54.19:0,54,1310	0/0:37,0:37:99:0,111,2662	0/0:31,0:31:93.05:0,93,2231	0/0:23,0:23:69.24:0,69,1676	0/0:16,0:16:45.63:0,46,1109	0/0:23,0:23:69.24:0,69,1698	0/0:27,0:27:78.18:0,78,1837	0/0:33,0:33:99:0,99,2414	0/0:30,0:30:90.31:0,90,2193	0/0:7,0:7:18.06:0,18,442
chr10	42384381	.	TTC	T	248.14	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.691;DP=665;FS=0.000;HRun=0;HaplotypeScore=83.3768;InbreedingCoeff=0.9894;MQ=78.80;MQ0=0;MQRankSum=-4.167;QD=19.09;ReadPosRankSum=2.363;VQSLOD=3.6884;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,108,2144	0/0:10,0:10:30.06:0,30,552	0/0:20,0:20:51.08:0,51,1109	0/0:14,0:14:42.14:0,42,850	0/0:32,0:32:84.29:0,84,1689	0/0:21,0:21:63.22:0,63,1277	0/0:28,0:28:84.25:0,84,1664	0/0:25,0:25:75.26:0,75,1513	0/0:25,0:25:75.26:0,75,1519	0/0:28,0:28:84.29:0,84,1703	0/0:29,0:29:84.14:0,84,1471	0/0:19,0:19:57.20:0,57,1153	0/0:22,0:22:66.21:0,66,1304	0/0:20,0:20:60.21:0,60,1217	0/0:26,0:26:78.26:0,78,1533	0/0:30,0:30:90.31:0,90,1823	1/1:0,13:13:30.09:343,30,0	0/0:10,0:10:27.05:0,27,504	0/0:24,0:24:72.25:0,72,1422	0/0:38,0:38:99:0,111,2128	0/0:32,0:32:96.31:0,96,1912	0/0:23,0:23:66.23:0,66,1338	0/0:18,0:18:50.89:0,51,976	0/0:24,0:24:72.25:0,72,1462	0/0:25,0:25:75.21:0,75,1481	0/0:35,0:35:99:0,105,2084	0/0:31,0:31:93.32:0,93,1883	0/0:7,0:7:17.73:0,18,335
chr10	42384663	.	AGG	A	9216.90	PASS	AB=0.726;AC=17;AF=0.304;AN=56;BaseQRankSum=5.459;DP=921;FS=5.566;HRun=2;HaplotypeScore=308.0090;InbreedingCoeff=-0.4362;MQ=61.93;MQ0=0;MQRankSum=-13.010;QD=14.38;ReadPosRankSum=5.188;VQSLOD=2.2177;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:48,11:59:99:132,0,1343	0/1:14,7:21:99:281,0,315	0/0:39,0:39:98.05:0,98,1805	0/0:46,1:43:99:0,101,1902	0/1:28,18:46:99:445,0,932	0/0:14,0:14:42.14:0,42,802	0/0:26,0:26:78.27:0,78,1550	0/1:34,38:72:99:1569,0,1387	0/1:24,9:33:99:334,0,878	0/1:23,21:44:99:930,0,1129	0/1:19,17:36:99:573,0,647	0/0:20,0:20:60.21:0,60,1216	0/0:23,0:23:69.22:0,69,1336	0/0:19,0:19:57.20:0,57,1142	0/1:24,17:41:99:654,0,790	0/1:16,9:24:99:431,0,467	0/1:21,10:31:99:230,0,706	0/1:8,4:12:21.70:22,0,455	0/1:20,14:33:99:532,0,899	0/1:27,17:44:99:723,0,746	0/0:17,0:17:17.92:0,18,250	0/0:23,0:23:55.34:0,55,1266	0/0:27,0:27:81.21:0,81,1567	0/0:23,0:23:63.69:0,64,1218	0/1:29,16:45:99:627,0,1383	0/1:23,21:44:99:779,0,1202	0/1:25,16:41:99:702,0,990	0/1:8,5:13:99:253,0,387
chr10	42384681	.	A	AGACG	12242.31	PASS	AB=0.852;AC=18;AF=0.321;AN=56;BaseQRankSum=15.362;DP=829;FS=27.457;HRun=0;HaplotypeScore=383.7581;InbreedingCoeff=-0.4737;MQ=60.88;MQ0=0;MQRankSum=-13.690;QD=20.93;ReadPosRankSum=3.626;VQSLOD=3.8088;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:35,15:51:99:1330,0,423	0/1:15,5:20:99:750,0,295	0/0:43,0:43:85.58:0,86,1470	0/0:40,0:31:71.21:0,71,1101	0/1:30,9:39:99:652,0,613	0/0:13,0:13:36.12:0,36,697	0/0:21,0:21:60.16:0,60,1063	0/1:63,0:63:99:629,0,2049	0/1:20,12:32:99:1071,0,518	0/1:29,8:37:99:787,0,1195	0/1:29,2:31:99:290,0,813	0/0:20,0:20:54.19:0,54,1037	0/0:24,0:24:72.22:0,72,1318	0/0:15,0:15:42.14:0,42,812	0/1:31,9:40:99:931,0,843	0/1:18,7:24:99:677,0,531	0/1:25,5:30:99:552,0,322	0/1:8,1:9:99:127,0,164	0/1:24,3:27:99:522,0,600	0/1:32,8:40:99:1032,0,830	0/1:14,0:14:58.67:59,0,63	0/0:19,0:19:54.04:0,54,949	0/0:23,0:23:66.19:0,66,1177	0/0:25,0:25:66.18:0,66,1162	0/1:21,9:30:99:711,0,763	0/1:35,5:40:99:780,0,1180	0/1:29,11:40:99:1160,0,796	0/1:16,1:17:99:183,0,437
chr10	42384694	.	CAGA	C	2222.73	PASS	AB=0.804;AC=17;AF=0.304;AN=56;BaseQRankSum=16.128;DP=655;FS=32.426;HRun=0;HaplotypeScore=305.0124;InbreedingCoeff=-0.4212;MQ=65.17;MQ0=0;MQRankSum=-12.256;QD=5.50;ReadPosRankSum=6.331;VQSLOD=1.3414;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:16,16:32:99:300,0,755	0/1:6,5:11:99:145,0,370	0/0:41,0:38:88.57:0,89,1859	0/0:33,1:26:38.65:0,39,941	0/1:23,9:32:92.85:93,0,979	0/0:14,0:14:42.10:0,42,901	0/0:16,0:16:45.11:0,45,954	0/0:35,1:36:79.48:0,79,2262	0/1:12,12:24:99:309,0,608	0/1:23,8:31:99:220,0,1376	0/1:26,2:28:10.38:10,0,922	0/0:18,0:18:54.19:0,54,1224	0/0:21,0:21:63.22:0,63,1401	0/0:11,0:11:33.11:0,33,730	0/1:25,9:34:99:204,0,1188	0/1:11,8:19:99:209,0,687	0/1:13,5:18:94.34:94,0,521	0/1:5,1:6:26.94:27,0,192	0/1:18,2:19:22.05:22,0,982	0/1:23,8:31:99:128,0,1410	0/1:9,0:9:5.32:5,0,60	0/0:15,0:15:21.55:0,22,911	0/0:18,0:18:48.12:0,48,1045	0/0:22,0:22:60.21:0,60,1335	0/1:19,8:27:99:214,0,878	0/1:25,5:30:83.35:83,0,1140	0/1:25,13:38:99:308,0,1360	0/1:13,1:14:9.97:10,0,768
chr10	42384699	.	GATAAA	G	181.08	PASS	AB=0.963;AC=11;AF=0.196;AN=56;BaseQRankSum=15.132;DP=645;FS=37.515;HRun=0;HaplotypeScore=328.8823;InbreedingCoeff=-0.2552;MQ=66.07;MQ0=0;MQRankSum=-11.642;QD=0.72;ReadPosRankSum=7.864;VQSLOD=0.8644;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:33:39.43:39,0,1171	0/1:11,0:11:35.76:36,0,515	0/0:42,0:38:98.92:0,99,2685	0/0:36,0:22:51.60:0,52,1215	0/0:27,0:27:46.03:0,46,1311	0/0:14,0:14:42.14:0,42,1322	0/0:14,0:14:42.13:0,42,1281	0/0:36,0:36:93.32:0,93,3124	0/1:23,0:23:41.54:42,0,796	0/1:30,0:30:32.06:32,0,1925	0/0:25,0:25:42.98:0,43,1045	0/0:19,0:19:57.20:0,57,1830	0/0:21,0:21:63.22:0,63,2032	0/0:11,0:11:33.11:0,33,1067	0/0:35,0:35:1.02:0,1,1588	0/1:20,0:20:14.12:14,0,967	0/0:20,0:20:3.89:0,4,780	0/0:7,0:7:1.30:0,1,353	0/1:17,0:17:5.52:6,0,1321	0/0:32,0:32:43.33:0,43,1716	0/1:6,5:11:83.63:84,0,103	0/0:15,0:15:11.98:0,12,1234	0/0:17,0:17:48.16:0,48,1531	0/0:21,0:21:57.20:0,57,1889	0/1:28,0:28:7.70:8,0,1271	0/1:24,1:25:42.67:43,0,1586	0/1:38,0:38:13.80:14,0,1900	0/1:14,0:14:1.92:2,0,1074
chr10	42384709	.	CTCGG	C	4590.43	PASS	AB=0.795;AC=19;AF=0.339;AN=56;BaseQRankSum=15.023;DP=577;FS=81.928;HRun=0;HaplotypeScore=277.6461;InbreedingCoeff=-0.5014;MQ=63.31;MQ0=0;MQRankSum=-12.556;QD=11.80;ReadPosRankSum=0.085;VQSLOD=1.4862;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:14,17:31:99:503,0,604	0/1:6,5:11:99:242,0,213	0/0:34,0:28:59.63:0,60,1555	0/0:32,0:16:40.91:0,41,654	0/1:16,9:25:99:166,0,471	0/1:14,0:14:4.89:5,0,794	0/0:12,0:12:33.11:0,33,748	0/0:30,1:31:50.48:0,50,1821	0/1:11,11:22:99:560,0,311	0/1:16,8:24:99:399,0,805	0/1:23,2:25:29.65:30,0,288	0/0:19,0:19:51.18:0,51,1236	0/0:18,0:18:50.42:0,50,1067	0/0:7,0:7:21.07:0,21,426	0/1:21,9:30:99:354,0,615	0/1:13,8:21:99:321,0,437	0/1:11,7:18:99:238,0,316	0/1:5,1:6:41.38:41,0,225	0/1:16,3:18:77.01:77,0,676	0/1:17,8:25:99:230,0,407	0/1:10,2:12:35.51:97,0,36	0/1:13,1:14:11.88:12,0,586	0/0:16,0:16:41.94:0,42,964	0/0:19,0:19:54.16:0,54,1149	0/1:17,8:25:99:451,0,468	0/1:14,5:19:99:222,0,477	0/1:22,13:35:99:596,0,666	0/1:12,1:13:45.94:46,0,508
chr10	42384712	.	GGAGAGAGAGAGAGAGAGAGAGAGAGA	G	2725.47	PASS	AB=0.969;AC=17;AF=0.315;AN=54;BaseQRankSum=5.804;DP=586;FS=29.448;HRun=0;HaplotypeScore=499.8666;InbreedingCoeff=0.2005;MQ=60.21;MQ0=0;MQRankSum=-6.085;QD=10.40;ReadPosRankSum=0.283;VQSLOD=0.1023;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:35,0:35:31.29:31,0,1684	0/1:11,0:11:10.50:11,0,119	0/0:32,0:26:3.01:0,3,33	./.	0/0:27,0:27:15.52:0,16,1501	0/0:16,0:16:18.05:0,18,1106	0/0:11,0:11:13.29:0,13,913	0/0:28,0:28:6.13:0,6,22	0/1:22,0:22:5.81:6,0,664	0/0:24,0:25:28.91:0,29,1083	0/0:20,0:25:3.28:0,3,338	0/0:21,0:21:27.09:0,27,2553	0/0:19,0:20:26.58:0,27,1654	0/0:9,0:9:6.02:0,6,561	0/1:29,0:31:30.03:30,0,838	0/1:22,0:21:4.72:5,0,942	0/1:19,0:19:7.08:7,0,55	0/0:6,0:6:6.02:0,6,418	1/1:16,2:17:1.96:395,2,0	1/1:24,1:25:8.98:422,9,0	1/1:11,0:11:3.16:13,3,0	0/0:11,0:11:14.08:0,14,851	0/0:16,0:16:24.08:0,24,1747	0/0:19,0:20:27.09:0,27,1838	0/0:24,0:26:5.34:0,5,1073	1/1:17,1:18:1.19:198,1,0	1/1:28,5:34:14.99:1180,15,0	0/1:13,3:16:99:582,0,458
chr10	42387085	.	C	CTG	163.01	PASS	AB=1.000;AC=20;AF=0.476;AN=42;BaseQRankSum=-2.471;DP=572;FS=1.740;HRun=0;HaplotypeScore=89.4926;InbreedingCoeff=0.3283;MQ=68.33;MQ0=20;MQRankSum=0.200;QD=0.55;ReadPosRankSum=-1.336;VQSLOD=1.7832;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:17:1.55:0,2,4	0/0:7,0:8:2.35:0,2,13	./.	./.	./.	0/1:16,0:17:8.11:17,0,8	0/1:24,0:23:0:1,0,0	./.	./.	0/1:19,0:19:0:1,0,0	./.	1/1:20,0:20:14.78:129,15,0	1/1:12,0:12:2.92:8,3,0	1/1:16,0:22:3:26,3,0	0/1:24,0:27:0.10:0,0,0	0/0:16,0:19:5.68:0,6,28	0/1:24,0:27:0:0,0,0	0/0:19,0:15:2.68:0,3,11	./.	0/0:14,0:14:2.99:0,3,24	0/0:52,0:47:0.85:0,1,2	1/1:12,1:12:5.99:54,6,0	1/1:14,0:14:2.98:22,3,0	1/1:36,6:45:2.04:6,2,0	0/1:12,0:13:0:0,0,0	0/1:20,0:20:0:1,0,0	0/1:18,0:18:0:0,0,0	0/0:10,0:11:2.95:0,3,19
chr10	42387886	.	TG	T	2315.96	PASS	AB=0.652;AC=50;AF=0.962;AN=52;BaseQRankSum=0.483;DP=353;FS=20.985;HRun=3;HaplotypeScore=147.6309;InbreedingCoeff=-0.0455;MQ=28.86;MQ0=16;MQRankSum=-1.318;QD=6.95;ReadPosRankSum=0.357;VQSLOD=-0.3740;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:8,9:16:6.85:53,0,7	1/1:1,11:12:29.19:130,29,0	./.	./.	1/1:4,12:16:12.67:57,13,0	1/1:5,11:16:25.91:108,26,0	1/1:2,6:7:13.66:60,14,0	1/1:9,20:26:50.49:241,50,0	1/1:6,6:11:15.28:66,15,0	1/1:2,11:13:31.52:197,32,0	1/1:4,9:11:17.26:64,17,0	1/1:3,8:11:20.60:87,21,0	1/1:3,11:14:28.11:118,28,0	1/1:1,11:12:15.30:74,15,0	1/1:4,10:13:24.81:103,25,0	1/1:4,7:11:14.65:56,15,0	1/1:2,10:11:20.28:99,20,0	0/1:6,7:11:42.24:65,0,42	1/1:6,9:12:22.66:139,23,0	1/1:4,9:13:17.08:66,17,0	1/1:3,4:5:8.12:36,8,0	1/1:1,6:7:15.62:62,16,0	1/1:2,8:10:15:57,15,0	1/1:1,5:6:4.77:18,5,0	1/1:1,13:14:31.15:135,31,0	1/1:4,15:18:35.90:219,36,0	1/1:3,9:11:16.35:77,16,0	1/1:5,2:7:5.64:27,6,0
chr10	42387894	.	G	GT	6463.91	PASS	AB=0.614;AC=50;AF=0.962;AN=52;BaseQRankSum=-0.004;DP=341;FS=16.323;HRun=1;HaplotypeScore=168.3764;InbreedingCoeff=-0.0441;MQ=29.06;MQ0=11;MQRankSum=-1.332;QD=20.26;ReadPosRankSum=-0.211;VQSLOD=3.2871;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:7,9:14:6.42:181,0,6	1/1:2,11:13:38.76:318,39,0	./.	./.	1/1:2,13:15:35.56:254,36,0	1/1:6,12:18:49.78:399,50,0	1/1:0,6:5:14.94:113,15,0	1/1:14,20:31:85.99:767,86,0	1/1:0,6:6:17.82:129,18,0	1/1:4,11:14:41.95:415,42,0	1/1:5,9:14:26.77:212,27,0	1/1:1,8:9:26.74:195,27,0	1/1:2,11:13:38.63:281,39,0	1/1:2,11:13:18.11:224,18,0	1/1:1,10:11:32.60:233,33,0	1/1:1,7:8:23.35:173,23,0	1/1:1,10:11:26.44:174,26,0	0/1:3,7:9:18.01:183,0,18	1/1:3,9:10:26.97:272,27,0	1/1:2,9:11:31.67:206,32,0	1/1:2,4:5:11.18:74,11,0	1/1:2,6:8:23.88:220,24,0	1/1:2,8:10:25.88:187,26,0	1/1:3,5:7:8.32:50,8,0	1/1:5,13:17:50.36:399,50,0	1/1:5,15:19:53.52:501,54,0	1/1:1,9:10:28.57:201,29,0	1/1:2,2:4:9:102,9,0
chr10	42388586	.	TCACACACACA	T	943.36	PASS	AB=0.847;AC=12;AF=0.250;AN=48;BaseQRankSum=3.442;DP=498;FS=3.479;HRun=0;HaplotypeScore=152.4179;InbreedingCoeff=0.3622;MQ=67.73;MQ0=9;MQRankSum=-3.084;QD=7.31;ReadPosRankSum=1.078;VQSLOD=2.5903;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:12.07:0,12,122	0/0:8,0:8:15.05:0,15,593	./.	./.	0/0:8,0:11:5.59:0,6,67	0/0:23,0:22:22.01:0,22,844	0/0:24,0:27:9.03:0,9,289	0/0:16,0:16:5.30:0,5,54	0/0:7,0:10:8.94:0,9,75	1/1:11,4:14:4.68:167,5,0	1/1:9,1:10:8.99:151,9,0	0/0:16,0:16:19.37:0,19,422	0/0:13,0:12:12:0,12,371	0/0:11,0:17:8.64:0,9,284	1/1:9,8:17:9.03:247,9,0	0/1:3,0:7:18.24:18,0,56	0/0:19,0:21:44.49:0,44,1538	0/1:18,0:21:69.64:128,0,70	./.	0/1:12,2:14:73.41:73,0,106	0/1:23,0:22:23.38:23,0,36	0/0:7,0:17:5.98:0,6,247	0/0:17,0:17:14.16:0,14,584	0/0:20,0:35:11.87:0,12,441	./.	0/0:21,0:21:8.38:0,8,71	1/1:9,2:20:18:286,18,0	0/0:3,0:3:2.04:0,2,6
chr10	42389498	.	CT	C	4607.55	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=13.996;DP=553;FS=5.288;HRun=10;HaplotypeScore=72.0487;InbreedingCoeff=0.9769;MQ=70.58;MQ0=0;MQRankSum=-1.550;QD=21.14;ReadPosRankSum=2.789;VQSLOD=5.9717;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,13:15:35.03:292,35,0	0/0:5,0:5:15.04:0,15,166	0/0:16,0:16:24.46:0,24,249	0/0:9,0:9:18.88:0,19,180	1/1:1,20:21:29.81:488,30,0	0/0:22,0:22:50.97:0,51,544	0/0:10,0:10:30.08:0,30,332	0/0:35,0:35:78.20:0,78,856	1/1:1,21:22:50.98:443,51,0	1/1:3,19:23:56:475,56,0	1/1:4,16:20:41.98:365,42,0	0/0:9,0:9:27.07:0,27,299	0/0:24,0:24:60.14:0,60,646	0/0:11,1:12:10.03:0,10,331	1/1:2,29:31:77.98:677,78,0	1/1:2,12:14:35.99:313,36,0	1/1:3,23:26:65.98:573,66,0	1/1:1,8:9:23.98:208,24,0	0/0:21,0:22:47.92:0,48,490	0/0:30,0:30:75.20:0,75,829	0/0:11,0:11:33.09:0,33,365	0/0:24,0:25:66:0,66,703	0/0:28,0:28:72.17:0,72,777	0/0:12,0:13:24.38:0,24,287	1/1:4,32:36:62.79:774,63,0	0/0:16,1:17:10.04:0,10,338	0/0:41,1:41:79.23:0,79,1102	0/0:4,0:4:12:0,12,115
chr10	42389833	.	G	GTAGA	10105.66	PASS	AB=0.984;AC=26;AF=0.464;AN=56;BaseQRankSum=7.827;DP=753;FS=5.902;HRun=0;HaplotypeScore=173.7968;InbreedingCoeff=0.8387;MQ=65.71;MQ0=2;MQRankSum=-5.481;QD=25.46;ReadPosRankSum=-2.796;VQSLOD=3.3816;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:29:42.92:115,0,43	0/0:10,0:10:15.03:0,15,223	0/0:25,0:19:41.16:0,41,641	0/0:23,0:20:44.33:0,44,749	0/0:26,0:26:41.93:0,42,514	0/0:25,0:25:63.22:0,63,1125	0/0:21,0:21:57.16:0,57,958	1/1:40,0:40:96:982,96,0	0/1:31,0:31:28.83:29,0,451	1/1:47,0:47:99:1268,118,0	1/1:33,0:33:30.09:510,30,0	0/0:27,0:27:81.22:0,81,1341	0/0:28,0:28:75.26:0,75,1330	0/0:24,0:25:66.22:0,66,1153	1/1:29,0:29:30.10:593,30,0	0/0:31,0:31:81.01:0,81,753	0/0:28,0:28:11.56:0,12,281	1/1:12,0:12:12.04:241,12,0	1/1:19,0:19:53.84:599,54,0	1/1:19,20:39:42.14:1015,42,0	1/1:17,0:17:38.96:618,39,0	0/0:24,0:24:66.21:0,66,1156	0/0:27,0:27:63.17:0,63,1086	0/0:36,0:36:99:0,105,1839	1/1:23,0:23:21.07:413,21,0	1/1:34,0:34:69.52:1662,70,0	1/1:37,0:38:99:1872,99,0	1/1:5,0:5:10.42:189,10,0
chr10	42389837	.	ATAGG	A	672.20	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=1.893;DP=740;FS=1.427;HRun=0;HaplotypeScore=199.0836;InbreedingCoeff=0.3621;MQ=63.12;MQ0=2;MQRankSum=1.088;QD=5.90;ReadPosRankSum=-2.248;VQSLOD=2.4968;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:29:3.18:3,0,74	0/0:10,0:10:30.10:0,30,550	0/0:24,0:18:33.13:0,33,711	0/0:22,0:19:42.16:0,42,967	0/0:27,0:27:36.73:0,37,660	0/0:25,0:25:66.23:0,66,1583	0/0:21,0:21:60.17:0,60,1223	0/1:36,0:36:3.81:4,0,285	0/0:28,0:28:27.72:0,28,792	0/0:46,0:46:9.76:0,10,453	0/0:32,0:32:12.06:0,12,152	0/0:29,0:29:80.99:0,81,1989	0/0:26,0:26:75.26:0,75,1800	0/0:24,0:24:66.23:0,66,1522	0/0:29,0:29:26.95:0,27,263	0/0:30,0:30:54.83:0,55,927	1/1:15,14:29:51.54:762,52,0	0/0:12,0:12:12:0,12,115	0/1:19,0:19:11.73:12,0,161	0/0:37,0:37:17.06:0,17,401	0/0:20,0:20:23.96:0,24,296	0/0:23,0:23:69.24:0,69,1619	0/0:26,0:26:69.19:0,69,1510	0/0:38,0:38:99:0,111,2454	0/0:21,0:21:17.99:0,18,207	0/0:35,0:35:28.56:0,29,630	0/0:36,0:36:70.39:0,70,679	0/0:5,0:5:5.48:0,5,63
chr10	42389840	.	G	GATA	4755.44	PASS	AB=0.895;AC=23;AF=0.411;AN=56;BaseQRankSum=10.305;DP=729;FS=0.000;HRun=0;HaplotypeScore=173.5889;InbreedingCoeff=0.5792;MQ=60.99;MQ0=2;MQRankSum=-3.324;QD=12.65;ReadPosRankSum=1.022;VQSLOD=4.5538;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:28:56.46:56,0,70	0/0:10,0:10:27.48:0,27,284	0/0:24,0:17:48.16:0,48,821	0/0:23,0:18:47.36:0,47,919	0/0:28,0:28:70.38:0,70,587	0/0:23,0:23:66.23:0,66,1219	0/0:22,0:22:63.18:0,63,1086	0/1:40,0:40:99:183,0,101	0/1:27,0:27:6.99:7,0,416	1/1:44,0:44:45.51:584,46,0	1/1:31,0:31:29.80:284,30,0	0/0:30,0:30:90.29:0,90,1589	0/0:26,0:26:75.26:0,75,1395	0/0:22,0:22:66.23:0,66,1221	1/1:25,0:25:30.09:357,30,0	0/0:32,0:32:92.72:0,93,754	0/0:28,0:28:8.10:0,8,199	1/1:12,0:12:12.04:148,12,0	1/1:15,3:18:22.68:269,23,0	1/1:22,11:33:1.27:532,1,0	0/1:12,7:19:14.29:278,0,14	0/0:23,0:23:69.22:0,69,1242	0/0:24,0:24:72.20:0,72,1270	0/0:38,0:38:99:0,114,2070	1/1:19,0:19:21.06:248,21,0	0/1:25,13:38:99:760,0,211	1/1:20,16:36:15.45:951,15,0	1/1:4,1:5:6.49:99,6,0
chr10	42389841	.	G	GA	1147.74	PASS	AB=0.812;AC=14;AF=0.250;AN=56;BaseQRankSum=11.216;DP=746;FS=0.397;HRun=0;HaplotypeScore=165.7111;InbreedingCoeff=0.3561;MQ=60.55;MQ0=2;MQRankSum=-6.997;QD=4.65;ReadPosRankSum=4.399;VQSLOD=3.4278;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:8.54:0,9,63	0/0:10,0:10:29.63:0,30,275	0/0:24,0:17:48.16:0,48,657	0/0:24,0:19:54.16:0,54,734	0/0:29,0:29:31.32:0,31,326	0/0:23,0:23:66.22:0,66,923	0/0:21,0:21:63.18:0,63,859	0/0:40,0:40:0.66:0,1,345	0/0:26,0:26:41.89:0,42,301	0/0:45,0:45:11.95:0,12,237	0/1:33,0:33:6.94:7,0,51	0/0:32,0:32:90.29:0,90,1236	0/0:28,0:28:78.24:0,78,1069	0/0:22,0:22:66.22:0,66,922	1/1:30,0:30:22.44:80,22,0	0/0:32,0:32:65.79:0,66,395	0/0:28,0:28:53.02:0,53,249	1/1:12,0:12:10.28:38,10,0	0/1:15,3:18:34.08:34,0,123	1/1:22,11:33:15.35:231,15,0	0/1:11,7:19:69.82:97,0,70	0/0:23,0:23:69.23:0,69,964	0/0:25,0:25:69.23:0,69,964	0/0:37,0:37:99:0,111,1552	1/1:21,0:21:5.19:40,5,0	0/1:25,13:38:99:352,0,161	0/1:20,16:36:97.82:403,0,98	0/1:6,1:7:16.61:34,0,17
chr10	42389842	.	T	TAGATAGAC	10426.74	PASS	AB=0.852;AC=25;AF=0.446;AN=56;BaseQRankSum=7.597;DP=764;FS=8.635;HRun=0;HaplotypeScore=235.4023;InbreedingCoeff=0.8037;MQ=61.05;MQ0=2;MQRankSum=-6.872;QD=27.22;ReadPosRankSum=0.361;VQSLOD=3.3116;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:32,0:33:37.10:419,0,37	0/1:4,0:11:65.89:602,0,66	0/0:25,0:18:43.98:0,44,535	0/0:26,0:21:44.09:0,44,503	0/0:29,0:29:11.92:0,12,518	0/0:23,0:23:66.12:0,66,1396	0/0:21,0:21:60.09:0,60,1031	1/1:41,0:41:57.59:645,58,0	0/0:26,0:26:17.84:0,18,601	1/1:6,38:48:99:1832,108,0	1/1:2,30:34:27.09:1130,27,0	0/0:32,0:33:93.17:0,93,1698	0/0:28,0:28:84.13:0,84,1665	0/0:23,0:23:63.06:0,63,1144	1/1:1,29:32:30.10:1308,30,0	0/0:33,0:33:54.70:0,55,912	0/0:27,0:27:60.05:0,60,923	1/1:0,11:14:12.04:528,12,0	1/1:16,0:16:41.96:364,42,0	1/1:32,0:32:37.38:330,37,0	1/1:19,0:19:36.84:348,37,0	0/0:23,0:23:66.14:0,66,1449	0/0:25,0:25:66.05:0,66,1067	0/0:38,0:38:99:0,111,2145	1/1:1,18:22:21.07:910,21,0	1/1:37,0:37:37.80:902,38,0	1/1:36,0:36:99:979,99,0	0/1:7,0:7:1.37:130,0,1
chr10	42389959	.	GATAGATAGATAGATA	G	2572.14	PASS	AB=0.787;AC=20;AF=0.357;AN=56;BaseQRankSum=10.825;DP=670;FS=5.672;HRun=0;HaplotypeScore=266.0860;InbreedingCoeff=0.7765;MQ=61.81;MQ0=1;MQRankSum=-7.566;QD=9.42;ReadPosRankSum=-3.844;VQSLOD=1.5604;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:33,0:32:14.49:166,14,0	0/0:15,0:14:36.08:0,36,1115	0/0:19,0:15:11.93:0,12,151	0/0:18,0:15:15.04:0,15,184	1/1:4,22:26:5.71:214,6,0	0/0:21,0:21:45.14:0,45,1588	0/0:20,0:20:35.45:0,35,577	0/0:31,0:31:63.19:0,63,834	1/1:9,27:36:12.04:496,12,0	1/1:36,0:36:48.50:695,49,0	1/1:16,0:16:12.97:127,13,0	0/0:28,0:28:75.25:0,75,3568	0/0:32,0:32:75.25:0,75,2542	0/0:22,0:22:54.18:0,54,2066	1/1:37,0:37:30.07:312,30,0	1/1:23,0:23:20.78:221,21,0	0/1:7,20:27:60.59:309,0,61	0/1:13,0:13:23.45:23,0,159	0/0:21,0:21:57.19:0,57,1169	0/0:25,0:25:57.19:0,57,1591	0/0:18,0:18:21.03:0,21,346	0/0:22,0:22:51.17:0,51,1536	0/0:22,0:22:22.02:0,22,762	0/0:26,0:26:53.50:0,54,1614	1/1:20,0:20:14.38:156,14,0	0/0:22,0:22:43.70:0,44,924	0/0:35,0:35:63.20:0,63,1369	1/1:6,0:6:3.01:58,3,0
chr10	42389963	.	GATAGATAGATA	G	5989.39	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=8.557;DP=655;FS=5.978;HRun=0;HaplotypeScore=207.0570;InbreedingCoeff=0.5655;MQ=60.93;MQ0=2;MQRankSum=-7.196;QD=17.77;ReadPosRankSum=-3.254;VQSLOD=3.1319;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:5,31:35:14.57:467,15,0	0/0:15,0:14:36.08:0,36,986	0/0:16,0:13:11.85:0,12,151	0/0:17,0:14:15.04:0,15,184	1/1:23,0:23:5.63:124,6,0	0/0:20,0:20:45.14:0,45,1320	0/1:18,0:18:31.41:31,0,520	0/0:30,0:30:78.24:0,78,1016	1/1:35,0:35:12.04:313,12,0	1/1:9,26:35:72.25:1735,72,0	1/1:2,13:15:15.97:468,16,0	0/0:28,0:28:78.26:0,78,2886	0/0:32,0:32:75.25:0,75,2339	0/0:20,0:20:57.19:0,57,1735	1/1:7,32:39:30.10:1005,30,0	1/1:1,20:21:20.73:706,21,0	0/1:26,0:26:30.80:199,0,31	0/1:14,0:14:57.51:190,0,58	0/0:24,0:23:63.21:0,63,1273	0/1:27,0:27:52.69:53,0,1365	0/0:16,0:16:21.03:0,21,298	0/0:22,0:22:14.50:0,15,1527	0/1:20,0:20:99:138,0,603	0/0:24,0:24:53.50:0,54,1457	1/1:2,19:21:14.41:503,14,0	0/0:19,0:19:43.43:0,43,749	0/0:34,0:34:63.20:0,63,1423	1/1:7,0:7:3.01:58,3,0
chr10	42389971	.	GATA	G	3174.53	PASS	AB=1.000;AC=27;AF=0.482;AN=56;BaseQRankSum=11.874;DP=640;FS=4.451;HRun=0;HaplotypeScore=136.8087;InbreedingCoeff=0.5804;MQ=57.33;MQ0=3;MQRankSum=-5.011;QD=8.89;ReadPosRankSum=-3.900;VQSLOD=2.1771;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:35,0:34:14.79:171,15,0	0/0:16,0:15:38.11:0,38,542	0/0:11,0:7:11.53:0,12,151	0/0:12,0:9:15.04:0,15,184	1/1:22,0:22:5.58:85,6,0	0/0:20,0:20:45.14:0,45,681	0/1:21,0:21:99:152,0,511	0/0:37,0:36:99:0,105,1320	1/1:28,0:28:12.02:135,12,0	1/1:31,0:31:72.18:920,72,0	1/1:13,0:13:14.80:192,15,0	0/0:31,0:31:35.66:0,36,1401	0/0:30,0:30:75.24:0,75,1125	0/0:23,0:23:66.22:0,66,1104	1/1:33,0:33:30.07:329,30,0	1/1:20,0:20:20.86:201,21,0	1/1:26,0:26:18.02:246,18,0	1/1:6,8:14:16.85:192,17,0	0/0:28,0:27:40.45:0,40,924	0/1:26,0:26:99:120,0,747	0/0:15,0:15:21.03:0,21,272	0/1:24,0:24:99:155,0,666	0/1:20,0:20:99:223,0,426	0/0:26,0:26:53.50:0,54,747	1/1:20,0:20:14.86:152,15,0	0/1:20,0:20:61.49:61,0,522	0/0:34,0:34:63.17:0,63,892	1/1:4,0:4:3.01:49,3,0
chr10	42389974	.	A	AATAG	4466.29	PASS	AB=0.920;AC=30;AF=0.600;AN=50;BaseQRankSum=-6.179;DP=643;FS=3.842;HRun=0;HaplotypeScore=141.3461;InbreedingCoeff=0.5549;MQ=56.33;MQ0=3;MQRankSum=5.409;QD=10.53;ReadPosRankSum=-3.036;VQSLOD=3.3121;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:10.89:0,11,61	1/1:9,7:15:6.02:140,6,0	./.	./.	1/1:22,0:22:6.02:108,6,0	1/1:12,9:21:9.03:210,9,0	1/1:15,0:22:6.81:42,7,0	0/1:39,0:38:0:0,0,0	0/1:27,0:27:5.07:124,0,5	0/1:26,0:26:20.46:20,0,225	0/0:14,0:14:9.44:0,9,37	0/0:28,0:29:5.33:0,5,666	1/1:14,18:33:36:834,36,0	0/0:22,0:22:30.10:0,30,460	0/0:32,0:32:24.90:0,25,140	0/0:20,0:20:20.65:0,21,138	1/1:20,0:25:4.56:68,5,0	0/0:10,0:13:4:0,4,47	1/1:22,5:27:21.06:415,21,0	1/1:16,9:25:24.08:507,24,0	./.	1/1:11,12:23:39.13:814,39,0	1/1:16,0:22:3.67:8,4,0	1/1:13,13:27:18.06:420,18,0	0/0:19,0:19:13.35:0,13,81	1/1:12,1:27:25.10:298,25,0	0/1:17,15:32:21.27:395,0,21	1/1:0,4:8:3.01:63,3,0
chr10	42391470	.	CTT	C	2344.60	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=-2.263;DP=548;FS=12.454;HRun=2;HaplotypeScore=100.0526;InbreedingCoeff=0.8239;MQ=69.79;MQ0=6;MQRankSum=1.343;QD=23.68;ReadPosRankSum=-3.473;VQSLOD=0.3383;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:20:57.19:0,57,970	1/1:12,0:12:30.01:406,30,0	0/0:38,0:31:92.34:0,92,1630	0/0:25,0:19:53:0,53,902	1/1:16,1:17:35.20:430,35,0	0/0:18,0:18:6.16:0,6,735	0/0:19,0:20:44.38:0,44,639	0/0:24,0:23:67.84:0,68,1111	1/1:19,7:26:48.09:554,48,0	0/0:24,0:24:64.77:0,65,1102	0/0:16,0:16:36.07:0,36,524	0/1:14,0:14:27.58:28,0,601	0/0:7,0:7:9.03:0,9,123	0/0:20,0:20:60.16:0,60,1022	0/0:29,0:29:71.39:0,71,921	1/1:24,6:29:75.75:1091,76,0	0/0:25,0:25:73.38:0,73,839	0/0:12,0:12:25.94:0,26,319	0/0:18,0:18:51.15:0,51,819	0/0:19,0:19:48.58:0,49,692	0/0:22,0:22:47.35:0,47,714	0/0:15,0:15:23.67:0,24,539	0/0:14,0:14:35.95:0,36,580	0/0:32,0:32:66.21:0,66,1087	0/0:12,0:11:24.02:0,24,311	0/0:12,0:12:36.08:0,36,566	0/0:17,0:17:43.93:0,44,617	0/0:8,0:8:12.22:0,12,266
chr10	42391574	.	AGCCAGAGAATGT	A	11453.87	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=15.204;DP=637;FS=0.796;HRun=0;HaplotypeScore=229.5370;InbreedingCoeff=0.9937;MQ=92.75;MQ0=0;MQRankSum=-13.483;QD=75.35;ReadPosRankSum=-0.653;VQSLOD=4.2308;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,111,6009	0/0:14,0:14:39.13:0,39,2392	0/0:29,0:29:75.26:0,75,3631	0/0:31,0:31:90.31:0,90,4830	0/0:24,0:24:72.25:0,72,4232	0/0:15,0:15:45.15:0,45,2688	0/0:24,0:24:72.25:0,72,3920	1/1:8,27:35:84.27:2707,84,0	0/0:23,0:23:69.24:0,69,4044	0/0:23,0:23:69.24:0,69,4228	0/0:26,0:26:78.27:0,78,4691	0/0:21,0:21:63.22:0,63,3767	0/0:24,0:24:72.25:0,72,4451	0/0:21,0:21:63.22:0,63,3915	0/0:27,0:27:78.27:0,78,4624	0/0:38,0:38:99:0,114,6952	1/1:5,21:26:51.18:1955,51,0	0/0:14,0:14:42.14:0,42,2484	1/1:5,7:12:18.06:695,18,0	1/1:2,17:18:45.15:1343,45,0	1/1:5,7:12:12.92:227,13,0	0/0:28,0:28:81.28:0,81,4895	0/0:24,0:24:72.25:0,72,4286	0/0:22,0:22:63.15:0,63,3425	0/0:18,0:18:48.16:0,48,2932	1/1:2,13:15:39.13:1440,39,0	1/1:1,24:25:63.22:2351,63,0	1/1:1,7:8:21.07:736,21,0
chr10	42391915	.	C	CAGT	19139.36	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-12.291;DP=717;FS=0.585;HRun=0;HaplotypeScore=105.8909;InbreedingCoeff=0.9855;MQ=85.99;MQ0=0;MQRankSum=-5.090;QD=54.37;ReadPosRankSum=-0.286;VQSLOD=6.7559;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,0:42:99:1578,102,0	1/1:4,8:12:30.10:649,30,0	0/0:25,0:25:72.19:0,72,1173	0/0:27,0:27:69.21:0,69,1128	1/1:4,31:35:81.28:1866,81,0	0/0:19,0:19:54.18:0,54,914	0/0:24,0:24:69.22:0,69,1145	1/1:2,32:35:99:2351,105,0	1/1:1,24:25:66.23:1520,66,0	0/0:29,0:29:81.28:0,81,1382	0/0:22,0:22:66.23:0,66,1126	0/0:29,0:29:87.30:0,87,1478	0/0:26,0:26:75.22:0,75,1238	0/0:15,0:15:45.14:0,45,741	0/0:37,0:37:99:0,99,1656	1/1:3,26:29:63.02:1452,63,0	1/1:0,19:19:48.16:1105,48,0	0/0:17,0:17:42.12:0,42,688	1/1:6,15:21:57.20:1263,57,0	1/1:1,24:25:57.20:1312,57,0	1/1:2,27:33:78.27:1750,78,0	0/0:19,0:19:51.16:0,51,840	0/0:26,0:26:75.22:0,75,1225	0/0:23,0:23:66.17:0,66,1067	0/0:27,0:27:81.28:0,81,1375	1/1:2,30:35:54.15:2154,54,0	1/1:5,28:34:87.30:1999,87,0	1/1:1,4:5:6.02:138,6,0
chr10	42392584	.	A	AACAC	6320.04	PASS	AB=0.932;AC=31;AF=0.554;AN=56;BaseQRankSum=11.696;DP=725;FS=17.980;HRun=0;HaplotypeScore=211.4094;InbreedingCoeff=0.6858;MQ=50.43;MQ0=15;MQRankSum=-9.743;QD=14.70;ReadPosRankSum=-2.595;VQSLOD=2.9719;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:13,3:52:14.98:275,15,0	1/1:11,0:17:24.21:292,24,0	0/0:20,0:12:1.70:0,2,119	0/0:20,0:11:5.85:0,6,64	1/1:21,4:25:8.07:77,8,0	0/0:35,0:35:75.24:0,75,1228	0/0:23,0:23:54.14:0,54,805	1/1:32,0:30:26.35:459,26,0	1/1:15,10:23:39.57:642,40,0	1/1:28,0:28:41.51:491,42,0	0/1:13,0:15:8.31:73,0,8	0/0:26,0:26:61.43:0,61,959	0/0:20,0:20:57.18:0,57,942	0/0:27,0:27:54.14:0,54,819	0/0:14,0:14:1.17:0,1,38	1/1:14,9:23:49.49:937,49,0	1/1:24,4:28:10.40:390,10,0	0/1:17,0:18:29.73:71,0,30	1/1:20,3:22:24.44:364,24,0	1/1:26,6:33:23.61:341,24,0	1/1:21,0:17:9.03:150,9,0	0/0:27,0:27:72.21:0,72,1145	0/0:31,0:32:90.18:0,90,1404	0/0:50,0:50:99:0,108,1740	0/1:28,0:29:20.37:20,0,47	1/1:18,9:25:51.16:1013,51,0	1/1:11,4:17:38.92:579,39,0	1/1:10,1:11:13.71:146,14,0
chr10	42392594	.	CACAT	C	2420.41	PASS	AB=0.977;AC=22;AF=0.393;AN=56;BaseQRankSum=8.246;DP=745;FS=33.779;HRun=0;HaplotypeScore=236.1790;InbreedingCoeff=-0.1228;MQ=48.21;MQ0=20;MQRankSum=-5.193;QD=5.39;ReadPosRankSum=-6.606;VQSLOD=-0.4266;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:47,0:46:13.76:14,0,176	0/1:19,0:18:66.98:67,0,82	0/0:25,0:11:1.77:0,2,148	0/0:24,0:7:8.79:0,9,92	0/1:21,0:21:9.35:38,0,9	0/0:35,0:35:86.95:0,87,1838	0/0:24,0:24:66.13:0,66,1328	0/1:32,0:30:80.29:257,0,80	0/1:24,0:22:31.89:124,0,32	0/1:23,8:29:86.26:546,0,86	1/1:9,4:13:3.31:156,3,0	0/0:27,0:26:69.12:0,69,1445	0/0:24,0:23:66.19:0,66,1526	0/0:28,0:28:66.16:0,66,1507	1/1:18,1:19:15.45:136,15,0	0/1:23,0:22:73.57:190,0,74	0/1:29,0:27:99:142,0,122	0/1:19,3:22:29.79:192,0,30	0/1:19,0:18:82.56:121,0,83	0/1:31,0:30:23.65:68,0,24	1/1:28,1:26:4.42:28,4,0	0/0:27,0:27:78.22:0,78,1837	0/0:35,0:35:99:0,101,2304	0/0:46,0:46:99:0,113,2648	1/1:31,2:33:19.44:211,19,0	0/1:30,0:26:99:146,0,252	0/1:17,0:17:45.95:82,0,46	0/1:9,0:9:52.48:76,0,52
chr10	42392596	.	CAT	C	3088.62	PASS	AB=0.987;AC=27;AF=0.482;AN=56;BaseQRankSum=8.809;DP=749;FS=23.495;HRun=0;HaplotypeScore=214.5679;InbreedingCoeff=0.3688;MQ=48.14;MQ0=21;MQRankSum=-6.012;QD=6.91;ReadPosRankSum=-6.608;VQSLOD=0.6676;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:46,0:45:8.25:8,0,139	0/1:18,0:17:24.42:71,0,24	0/0:26,1:11:1.76:0,2,123	0/0:27,0:6:11.74:0,12,117	0/1:21,0:21:0.93:39,0,1	0/0:34,0:34:86.93:0,87,1377	0/0:24,0:24:69.12:0,69,1031	0/1:29,0:27:36.84:300,0,37	1/1:24,0:22:8.48:140,8,0	1/1:31,0:29:11.48:355,11,0	1/1:13,0:13:18.13:131,18,0	0/0:27,0:26:54.77:0,55,1061	0/0:25,0:24:63.96:0,64,1111	0/0:25,0:25:66.16:0,66,1140	1/1:16,4:20:36.45:379,36,0	1/1:23,0:22:3.49:176,3,0	0/1:25,3:27:23.61:136,0,24	1/1:18,4:22:11.18:377,11,0	0/1:19,0:18:7.02:163,0,7	1/1:33,0:32:10.60:192,11,0	1/1:29,0:25:9.82:73,10,0	0/0:28,0:28:81.20:0,81,1381	0/0:38,0:38:93.97:0,94,1723	0/0:46,0:46:99:0,116,1987	1/1:27,6:33:34.08:421,34,0	0/1:31,0:27:55.37:153,0,55	0/1:17,0:17:0.20:85,0,0	0/1:9,0:9:7.61:81,0,8
chr10	42392598	.	T	TACAC	6406.11	PASS	AB=0.927;AC=31;AF=0.554;AN=56;BaseQRankSum=14.752;DP=747;FS=15.395;HRun=0;HaplotypeScore=226.6283;InbreedingCoeff=0.5794;MQ=46.24;MQ0=20;MQRankSum=-12.104;QD=14.43;ReadPosRankSum=-2.190;VQSLOD=2.5732;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:40,0:40:79.17:100,0,79	1/1:10,8:17:27.63:528,28,0	0/0:27,0:11:16.24:0,16,190	0/0:26,0:4:9.01:0,9,89	1/1:16,5:21:0.73:2,1,0	0/0:34,0:34:72.19:0,72,1112	0/0:24,0:24:60.17:0,60,954	1/1:30,0:28:3.41:520,3,0	1/1:14,10:22:41.93:677,42,0	1/1:23,0:30:47.89:475,48,0	0/1:10,0:14:8.42:52,0,8	0/0:27,0:26:57.18:0,57,937	0/0:25,0:24:66.21:0,66,1071	0/0:25,0:25:63.20:0,63,1042	0/1:21,0:21:24.88:55,0,25	1/1:14,9:22:41.94:743,42,0	1/1:24,5:27:38.50:422,38,0	0/1:20,0:22:26.15:76,0,26	1/1:14,3:16:36.72:479,37,0	1/1:26,7:32:17.59:195,18,0	1/1:28,1:25:6.78:50,7,0	0/0:28,0:28:72.21:0,72,1149	0/0:38,0:38:99:0,102,1541	0/0:47,0:47:99:0,105,1694	0/1:31,0:33:31.66:70,0,32	1/1:23,9:28:66.04:1104,66,0	1/1:10,7:17:30.98:587,31,0	1/1:7,2:9:19.35:272,19,0
chr10	42392633	.	T	TACAC	9067.52	PASS	AB=0.590;AC=30;AF=0.536;AN=56;BaseQRankSum=3.513;DP=838;FS=2.946;HRun=0;HaplotypeScore=228.7087;InbreedingCoeff=0.6970;MQ=48.61;MQ0=25;MQRankSum=-3.940;QD=21.34;ReadPosRankSum=-1.723;VQSLOD=3.9045;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:36:42.13:0,42,685	1/1:5,0:13:18.06:314,18,0	0/0:67,0:16:27.66:0,28,334	0/0:52,0:13:15.82:0,16,252	1/1:10,12:22:11.86:248,12,0	0/0:33,0:33:85.16:0,85,1405	0/0:26,0:26:60.17:0,60,953	1/1:12,22:33:78.12:1277,78,0	1/1:18,6:23:32.08:752,32,0	0/1:15,0:38:61.65:226,0,62	1/1:8,0:18:22.46:103,22,0	0/0:26,0:25:60.19:0,60,982	0/0:27,0:27:60.20:0,60,1018	0/0:30,0:30:72.20:0,72,1155	0/1:4,0:23:15.02:116,0,15	1/1:8,9:17:21.07:528,21,0	1/1:14,9:23:9.13:607,9,0	0/1:7,0:20:64.58:129,0,65	1/1:12,4:14:29.96:488,30,0	1/1:7,20:29:38.46:860,38,0	1/1:12,24:37:23.46:469,23,0	0/0:36,0:36:87.28:0,87,1452	0/0:34,0:34:74.88:0,75,1151	0/0:45,0:45:89.47:0,89,1447	0/1:12,0:40:32.59:224,0,33	1/1:23,17:38:89.08:1848,89,0	1/1:6,7:13:21.07:427,21,0	1/1:2,6:8:18.06:452,18,0
chr10	42392724	.	T	TG	7822.06	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=7.312;DP=578;FS=1.452;HRun=6;HaplotypeScore=75.2613;InbreedingCoeff=0.9980;MQ=77.88;MQ0=0;MQRankSum=-2.822;QD=32.46;ReadPosRankSum=-0.825;VQSLOD=4.7474;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:48.10:0,48,490	1/1:0,6:6:18.06:226,18,0	0/0:12,0:12:26.26:0,26,246	0/0:18,0:18:35.97:0,36,337	1/1:2,23:25:69.22:859,69,0	0/0:34,0:34:90.20:0,90,918	0/0:19,0:19:51.11:0,51,520	1/1:2,28:30:84.21:1014,84,0	1/1:1,15:15:39.12:490,39,0	0/0:30,0:29:87.20:0,87,888	0/0:18,0:18:48.08:0,48,481	0/0:19,0:19:51.11:0,51,520	0/0:13,0:13:39.09:0,39,397	0/0:16,0:16:39.08:0,39,398	0/0:25,0:25:57.11:0,57,574	1/1:0,16:16:48.15:604,48,0	1/1:0,17:17:36.12:453,36,0	0/0:19,0:18:48.07:0,48,479	1/1:0,25:26:78.20:959,78,0	1/1:2,26:28:72.23:906,72,0	1/1:7,6:13:21.04:238,21,0	0/0:31,0:31:78.14:0,78,781	0/0:27,0:27:75.17:0,75,765	0/0:13,0:12:33.07:0,33,336	0/0:17,0:17:45.10:0,45,459	1/1:5,25:30:75.24:942,75,0	1/1:2,19:21:57.18:717,57,0	1/1:0,13:13:33.11:414,33,0
chr10	42393285	.	TTGTTTGTTTCTGTTCTGTTC	T	18161.85	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=15.613;DP=692;FS=0.000;HRun=0;HaplotypeScore=365.6461;InbreedingCoeff=0.9485;MQ=78.42;MQ0=1;MQRankSum=-10.033;QD=70.12;ReadPosRankSum=1.357;VQSLOD=3.5147;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:90.20:0,90,7432	1/1:2,7:9:12.51:671,13,0	0/0:36,0:30:84.29:0,84,4206	0/0:53,0:47:99:0,119,4927	1/1:10,32:42:84.21:3323,84,0	0/0:30,0:30:90.29:0,90,7583	0/0:23,0:23:66.23:0,66,4763	1/1:15,17:32:51.14:722,51,0	1/1:4,16:20:30.10:1676,30,0	0/0:32,0:32:87.30:0,87,7482	0/0:31,0:31:93.31:0,93,7894	0/0:28,0:28:78.27:0,78,6484	0/0:26,0:26:72.25:0,72,5930	0/0:21,0:21:57.19:0,57,4007	0/0:28,0:28:81.28:0,81,7263	1/1:1,16:17:27.09:1509,27,0	1/1:3,9:12:9.03:503,9,0	0/0:14,0:14:39.13:0,39,3257	1/1:9,16:25:48.15:1626,48,0	1/1:5,20:25:54.06:2233,54,0	1/1:4,7:11:6.02:335,6,0	0/0:23,0:23:69.24:0,69,5968	0/0:17,0:17:48.16:0,48,4454	0/0:20,0:20:51.18:0,51,4123	0/0:18,0:18:54.19:0,54,4696	1/1:7,30:37:87.27:3237,87,0	1/1:4,20:24:40.49:2159,40,0	1/1:1,4:5:3.01:168,3,0
chr10	42394794	.	A	ATGTG	4660.51	PASS	AC=48;AF=0.960;AN=50;BaseQRankSum=-0.554;DP=584;FS=42.764;HRun=0;HaplotypeScore=106.5432;InbreedingCoeff=0.3022;MQ=54.72;MQ0=9;MQRankSum=-0.470;QD=9.73;ReadPosRankSum=-1.384;VQSLOD=2.0509;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:39:5.06:48,5,0	1/1:6,0:7:4.24:27,4,0	./.	./.	1/1:6,1:15:6.02:107,6,0	1/1:21,2:25:19.73:286,20,0	1/1:18,10:33:14.65:294,15,0	1/1:29,0:28:28.81:307,29,0	1/1:6,0:9:6.02:98,6,0	1/1:20,6:26:27.09:590,27,0	1/1:3,4:8:6.02:143,6,0	1/1:14,6:25:11.83:227,12,0	1/1:9,6:15:12.04:284,12,0	./.	1/1:8,9:18:15.05:357,15,0	1/1:17,0:20:3.01:52,3,0	0/0:25,0:25:42.10:0,42,615	1/1:21,10:37:6.64:85,7,0	1/1:19,0:16:4.82:36,5,0	1/1:12,0:12:2.87:23,3,0	1/1:39,0:39:23.78:338,24,0	1/1:7,5:14:9.03:214,9,0	1/1:4,4:9:3.01:71,3,0	1/1:13,17:30:25.06:515,25,0	1/1:7,6:14:6.02:143,6,0	1/1:12,0:16:20.96:200,21,0	1/1:6,0:5:6.02:79,6,0	1/1:9,0:8:12.02:137,12,0
chr10	42395348	.	T	TA	2921.77	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-9.570;DP=564;FS=5.257;HRun=8;HaplotypeScore=54.8939;InbreedingCoeff=0.9441;MQ=73.58;MQ0=0;MQRankSum=0.347;QD=26.81;ReadPosRankSum=2.354;VQSLOD=4.4569;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,21:23:60.14:678,60,0	1/1:0,7:7:15.04:173,15,0	0/0:10,0:10:8.99:0,9,81	0/0:14,0:14:16.83:0,17,127	1/1:2,28:30:87.25:997,87,0	0/0:24,0:24:69.04:0,69,631	0/0:18,0:18:48.01:0,48,435	0/0:26,0:26:65.99:0,66,595	1/1:1,10:11:2.63:284,3,0	0/0:25,0:25:66.03:0,66,604	0/0:25,0:25:56.99:0,57,515	0/0:20,0:20:60.01:0,60,541	0/0:17,0:17:48.02:0,48,439	0/0:17,0:17:48.02:0,48,435	0/0:27,0:27:75.02:0,75,682	1/1:5,14:19:33.10:381,33,0	1/1:0,19:19:51.15:589,51,0	0/0:15,0:14:39.02:0,39,357	0/0:23,0:23:46.53:0,47,482	0/0:17,0:16:39.02:0,39,357	0/0:15,0:15:36.01:0,36,329	0/0:26,0:26:78:0,78,700	0/0:38,0:38:92.99:0,93,842	0/0:22,0:22:54.01:0,54,490	0/0:18,0:18:42:0,42,378	0/0:22,0:22:60.03:0,60,549	0/0:27,0:25:71.99:0,72,646	0/0:9,0:9:27.01:0,27,247
chr10	42395591	.	AG	A	420.72	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.673;DP=611;FS=8.165;HRun=6;HaplotypeScore=87.7714;InbreedingCoeff=0.9432;MQ=63.21;MQ0=2;MQRankSum=-2.266;QD=21.04;ReadPosRankSum=0.497;VQSLOD=2.4036;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,18:20:48.12:516,48,0	0/0:10,0:10:30.10:0,30,393	0/0:23,0:19:47.78:0,48,572	0/0:20,0:15:26.85:0,27,339	0/0:26,0:26:75.23:0,75,962	0/0:22,0:21:53.66:0,54,741	0/0:19,0:19:57.16:0,57,720	0/0:30,0:30:78.83:0,79,963	0/0:24,0:24:69.20:0,69,869	0/0:27,0:27:75.18:0,75,950	0/0:22,0:22:63.20:0,63,822	0/0:15,0:15:42.14:0,42,552	0/0:19,0:19:57.18:0,57,747	0/0:31,0:31:90.24:0,90,1142	0/0:21,0:21:51.14:0,51,642	0/0:20,0:20:57.19:0,57,749	0/0:24,0:23:69.22:0,69,907	0/0:12,0:12:33.11:0,33,434	0/0:13,0:13:36.12:0,36,469	0/0:19,0:19:51.16:0,51,655	0/0:15,0:14:33.09:0,33,419	0/0:24,0:24:69.22:0,69,907	0/0:38,0:38:99:0,105,1368	0/0:38,0:38:82.69:0,83,1184	0/0:25,0:25:75.23:0,75,973	0/0:26,0:26:75.24:0,75,982	0/0:23,0:22:51.17:0,51,670	0/0:4,0:4:9.03:0,9,118
chr10	42395678	.	AGAAG	A	5769.92	PASS	AB=0.854;AC=21;AF=0.375;AN=56;BaseQRankSum=5.943;DP=596;FS=7.346;HRun=0;HaplotypeScore=150.3927;InbreedingCoeff=0.0127;MQ=49.33;MQ0=2;MQRankSum=-5.425;QD=14.21;ReadPosRankSum=-0.061;VQSLOD=4.1238;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:28:99:268,0,261	0/0:4,0:4:9.48:0,9,98	0/0:7,0:4:11.98:0,12,188	0/0:7,0:3:5.91:0,6,89	0/1:24,0:24:70.84:138,0,71	0/0:26,0:26:78.09:0,78,1511	0/0:12,0:12:11.40:0,11,450	1/1:44,0:38:41.30:472,41,0	0/1:18,0:18:45.18:116,0,45	0/1:24,10:33:99:548,0,512	0/1:19,8:26:99:595,0,345	0/0:20,0:20:56.41:0,56,1167	0/0:18,0:18:54.13:0,54,1188	0/0:30,0:30:89.91:0,90,1626	0/1:19,11:29:99:621,0,384	0/1:25,0:25:99:201,0,123	0/1:10,2:11:8.41:189,0,8	0/1:7,8:15:53.58:434,0,54	0/1:21,0:20:20.86:172,0,21	1/1:32,2:29:23.36:432,23,0	0/1:4,7:10:1.74:167,0,2	0/0:21,0:21:63.08:0,63,1260	0/0:26,0:26:78.13:0,78,1668	0/0:18,0:18:38.84:0,39,846	0/1:18,13:31:99:644,0,318	1/1:10,11:20:31.59:539,32,0	0/1:23,0:17:80.99:81,0,99	1/1:7,1:8:5.29:153,5,0
chr10	42395723	.	GAAA	G	1009.88	PASS	AB=0.812;AC=10;AF=0.179;AN=56;BaseQRankSum=10.525;DP=605;FS=6.743;HRun=3;HaplotypeScore=164.3476;InbreedingCoeff=-0.1143;MQ=49.49;MQ0=6;MQRankSum=-6.851;QD=4.95;ReadPosRankSum=5.511;VQSLOD=-0.3016;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:92.44:0,92,1846	0/0:8,0:8:23.40:0,23,221	0/0:13,0:7:20.94:0,21,292	0/0:13,0:9:26.81:0,27,470	0/1:15,13:28:9.14:253,0,9	0/0:26,0:26:78.23:0,78,1726	0/0:20,0:20:57.10:0,57,1182	0/0:23,0:20:36.36:0,36,248	0/1:12,4:16:35.70:92,0,36	0/0:38,0:37:99:0,99,2060	0/0:23,0:22:60.20:0,60,1234	0/0:15,0:15:45.13:0,45,1010	0/0:19,0:19:57.20:0,57,1321	0/0:27,0:27:81.26:0,81,1932	0/0:33,0:32:84.28:0,84,1609	0/1:10,12:22:2.02:246,0,2	0/1:10,1:10:16.15:16,0,133	0/0:16,0:16:39.05:0,39,678	0/1:12,3:15:67.82:111,0,68	0/1:30,7:32:81.48:188,0,81	0/1:15,1:15:40.52:41,0,84	0/0:19,0:19:57.19:0,57,1276	0/0:23,0:22:66.21:0,66,1469	0/0:23,0:23:60.66:0,61,1369	0/0:30,0:30:66.22:0,66,1245	0/1:20,5:24:99:114,0,233	0/1:19,6:19:55.49:55,0,98	0/1:7,2:8:38.57:39,0,63
chr10	42397385	.	C	CCTGGGTT	11475.92	PASS	AC=24;AF=0.462;AN=52;BaseQRankSum=4.152;DP=466;FS=1.968;HRun=0;HaplotypeScore=135.6972;InbreedingCoeff=0.9532;MQ=47.67;MQ0=10;MQRankSum=-12.585;QD=63.76;ReadPosRankSum=-2.812;VQSLOD=4.2748;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:30:63.16:0,63,1496	1/1:2,4:7:15.05:580,15,0	./.	./.	1/1:10,8:19:35.99:982,36,0	0/0:16,0:16:39.13:0,39,967	0/0:18,0:18:36.12:0,36,891	1/1:18,5:17:33.11:1166,33,0	1/1:7,4:9:21.07:777,21,0	0/0:34,0:32:78.26:0,78,1843	0/0:14,0:14:39.13:0,39,932	0/0:20,0:20:39.12:0,39,865	0/0:14,0:14:33.02:0,33,681	0/0:13,0:13:27.05:0,27,614	0/0:19,0:19:51.13:0,51,1187	1/1:7,7:14:36.12:1200,36,0	1/1:16,4:20:0.30:478,0,0	0/0:23,0:23:51.13:0,51,1104	1/1:10,10:17:42.14:1616,42,0	1/1:4,8:12:36.12:1257,36,0	1/1:6,5:11:18.06:522,18,0	0/0:21,0:21:45.15:0,45,1115	0/0:15,0:15:32.92:0,33,779	0/0:22,0:22:45.15:0,45,1105	0/0:22,0:22:57.20:0,57,1391	1/1:8,12:19:42.14:1544,42,0	1/1:7,8:14:27.09:888,27,0	1/1:3,5:4:12.04:465,12,0
chr10	42397420	.	A	AC	758.30	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=-2.267;DP=473;FS=5.815;HRun=7;HaplotypeScore=102.6280;InbreedingCoeff=0.5914;MQ=59.26;MQ0=11;MQRankSum=0.911;QD=13.79;ReadPosRankSum=-2.473;VQSLOD=2.8219;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:16,22:38:80.91:852,81,0	0/0:6,0:6:14.60:0,15,84	0/1:16,0:5:4.91:5,0,64	0/0:15,0:7:10.06:0,10,61	0/0:23,0:22:31.52:0,32,193	0/0:18,0:18:29.05:0,29,321	0/0:15,0:15:36.01:0,36,338	0/0:29,0:28:60.90:0,61,341	0/0:11,0:10:22.45:0,22,118	0/0:23,0:21:52.14:0,52,455	0/0:17,0:17:42.04:0,42,397	0/0:15,0:15:31.99:0,32,274	0/0:10,0:10:25.22:0,25,218	0/0:16,0:16:33.04:0,33,314	0/0:21,0:21:48.04:0,48,453	0/0:11,0:11:28.05:0,28,146	0/0:12,0:12:23.66:0,24,121	0/0:22,0:22:44.87:0,45,418	0/0:20,0:18:44.12:0,44,221	0/0:15,0:15:34.89:0,35,200	0/0:8,0:8:15.93:0,16,82	0/0:17,0:17:36:0,36,334	0/0:21,0:21:31.76:0,32,329	0/0:17,0:17:44.96:0,45,406	0/0:16,0:16:39.02:0,39,364	0/0:22,1:23:17.21:0,17,240	0/0:15,0:14:29.75:0,30,151	0/0:2,0:2:2.84:0,3,14
chr10	42397427	.	CA	C	2389.01	PASS	AB=0.947;AC=25;AF=0.446;AN=56;BaseQRankSum=7.388;DP=480;FS=2.665;HRun=8;HaplotypeScore=96.4373;InbreedingCoeff=0.8830;MQ=65.32;MQ0=9;MQRankSum=-5.680;QD=11.95;ReadPosRankSum=-0.114;VQSLOD=3.1023;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:76.02:0,76,537	1/1:2,5:7:6:58,6,0	0/0:18,0:7:17.35:0,17,149	0/1:17,0:10:6.90:7,0,80	1/1:10,12:21:24.01:231,24,0	0/0:18,0:18:42.05:0,42,455	0/0:13,0:13:36.07:0,36,415	1/1:10,21:30:59.95:544,60,0	1/1:2,12:13:18:173,18,0	0/0:21,0:20:37.36:0,37,435	0/0:17,0:17:42.12:0,42,491	0/0:15,0:15:33.10:0,33,390	0/0:11,0:11:24.05:0,24,265	0/0:16,0:16:36.08:0,36,407	0/0:22,0:22:58.38:0,58,668	1/1:2,11:13:21.03:202,21,0	1/1:3,11:14:21.02:200,21,0	0/0:21,0:21:54.11:0,54,605	1/1:5,16:20:50.90:456,51,0	1/1:6,8:14:17.88:158,18,0	1/1:3,6:9:8.85:86,9,0	0/0:18,0:18:39.06:0,39,439	0/0:22,0:22:48.06:0,48,523	0/0:20,0:20:45.11:0,45,515	0/0:14,0:14:36.11:0,36,431	1/1:11,10:21:13.47:263,13,0	1/1:5,10:14:21.02:201,21,0	1/1:0,1:1:3:29,3,0
chr10	42399129	.	AT	A	5411.06	PASS	AC=22;AF=0.500;AN=44;BaseQRankSum=15.387;DP=427;FS=5.681;HRun=2;HaplotypeScore=132.9246;InbreedingCoeff=0.9692;MQ=88.94;MQ0=0;MQRankSum=-15.401;QD=32.40;ReadPosRankSum=0.615;VQSLOD=4.0903;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	0/0:11,0:11:33.11:0,33,495	0/0:28,0:27:76.12:0,76,1086	0/0:26,0:25:35.57:0,36,775	1/1:0,22:22:32.86:421,33,0	0/0:21,0:21:63.20:0,63,924	0/0:28,0:28:81.27:0,81,1213	1/1:1,10:11:27.05:350,27,0	1/1:0,18:18:54.18:697,54,0	./.	./.	0/0:25,0:25:75.21:0,75,1098	0/0:24,0:24:72.24:0,72,1077	0/0:14,0:14:42.14:0,42,629	./.	1/1:0,16:16:42.14:544,42,0	1/1:0,16:16:42.11:538,42,0	./.	1/1:0,11:11:33.10:419,33,0	1/1:0,16:16:39.13:505,39,0	1/1:0,16:16:29.52:388,30,0	0/0:22,0:22:63.21:0,63,943	0/0:30,0:30:84.27:0,84,1238	0/0:30,0:30:87.25:0,87,1277	./.	1/1:0,17:17:51.17:662,51,0	1/1:0,23:23:66.21:848,66,0	1/1:0,1:1:3.01:39,3,0
chr10	42399270	.	TTGTGTGTGTGTG	T	661.86	PASS	AB=0.833;AC=9;AF=0.225;AN=40;BaseQRankSum=3.935;DP=427;FS=0.000;HRun=0;HaplotypeScore=176.4094;InbreedingCoeff=0.5174;MQ=68.98;MQ0=16;MQRankSum=-4.039;QD=6.55;ReadPosRankSum=-0.947;VQSLOD=2.1792;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	0/0:6,0:6:6.02:0,6,241	./.	./.	1/1:11,5:17:2.22:7,2,0	0/0:19,0:18:9.01:0,9,118	0/0:16,0:18:6.49:0,6,96	0/0:17,0:17:12:0,12,171	1/1:9,4:12:15.05:392,15,0	./.	./.	0/0:16,0:16:12.03:0,12,193	0/0:8,0:9:3.01:0,3,36	0/0:16,0:17:6.02:0,6,97	./.	1/1:8,7:14:12.04:277,12,0	1/1:20,0:30:3.01:84,3,0	./.	0/0:27,0:26:13.28:0,13,170	0/0:21,0:23:25.59:0,26,263	0/0:19,0:15:12.04:0,12,161	0/0:20,0:23:21.07:0,21,351	0/0:20,0:23:12.03:0,12,191	0/0:30,0:29:27.09:0,27,419	./.	0/0:19,0:18:2.55:0,3,36	0/1:20,0:23:28.54:29,0,139	0/0:11,0:11:7.56:0,8,68
chr10	42399948	.	GGGTGTGGTCCTGTTGGAGTA	G	4923.73	PASS	AB=0.571;AC=11;AF=0.196;AN=56;BaseQRankSum=10.912;DP=715;FS=13.863;HRun=0;HaplotypeScore=323.3119;InbreedingCoeff=0.8723;MQ=54.68;MQ0=15;MQRankSum=-4.203;QD=43.96;ReadPosRankSum=-0.261;VQSLOD=2.4789;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,27:29:21.07:887,21,0	0/0:14,0:14:39.13:0,39,2632	0/0:25,0:7:15.05:0,15,848	0/0:28,0:7:18.06:0,18,984	0/0:27,0:27:63.20:0,63,4013	0/0:33,0:33:84.29:0,84,5778	0/0:27,0:27:75.22:0,75,3751	0/0:40,0:40:99:0,102,4063	0/0:24,0:24:63.22:0,63,4624	1/1:5,20:25:51.17:1635,51,0	1/1:3,15:18:27.09:767,27,0	0/0:35,0:35:96.33:0,96,7025	0/0:32,0:32:81.28:0,81,5408	0/0:29,0:29:84.29:0,84,5953	1/1:4,15:19:15.05:792,15,0	0/0:29,0:29:87.30:0,87,5705	0/0:28,0:28:72.25:0,72,4939	0/1:2,6:8:67.12:160,0,67	0/0:12,0:9:21.05:0,21,1037	0/0:24,0:24:66.23:0,66,4895	0/0:43,0:42:99:0,117,8945	0/0:20,0:20:54.19:0,54,4324	0/0:20,0:20:60.21:0,60,4460	0/0:47,0:47:99:0,141,10770	1/1:0,13:13:15.05:684,15,0	0/0:30,0:30:84.29:0,84,5840	0/0:28,0:28:78.27:0,78,5923	0/0:8,0:8:24.08:0,24,2147
chr10	42400088	.	G	GCTC	7321	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=15.581;DP=583;FS=6.662;HRun=0;HaplotypeScore=94.4263;InbreedingCoeff=0.9834;MQ=49.21;MQ0=14;MQRankSum=-14.599;QD=36.79;ReadPosRankSum=0.056;VQSLOD=4.9803;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:15:21.03:317,21,0	0/0:7,0:7:21.06:0,21,314	0/0:21,0:6:18.06:0,18,279	0/0:23,0:8:23.95:0,24,352	1/1:3,18:21:24.08:527,24,0	0/0:19,0:19:54.17:0,54,841	0/0:27,0:27:66.22:0,66,1056	0/0:39,0:39:99:0,99,1523	1/1:7,15:22:45.07:867,45,0	1/1:30,0:30:81.28:1333,81,0	1/1:13,0:13:15.05:257,15,0	0/0:31,0:31:87.24:0,87,1343	0/0:31,0:31:90.31:0,90,1443	0/0:25,0:25:75.26:0,75,1192	1/1:22,0:22:42.14:698,42,0	1/1:6,24:30:78.27:1656,78,0	1/1:6,6:13:15.02:285,15,0	1/1:11,0:11:27.09:429,27,0	0/0:13,0:11:33.11:0,33,531	0/0:12,0:12:36.12:0,36,575	0/0:30,0:30:87.30:0,87,1386	0/0:18,0:18:48.16:0,48,765	0/0:17,0:17:42.12:0,42,628	0/0:29,0:29:72.23:0,72,1134	1/1:22,0:22:57.19:952,57,0	0/0:19,0:19:39.13:0,39,626	0/0:20,0:19:60.20:0,60,956	0/0:3,0:3:9.03:0,9,145
chr10	42400091	.	C	CCTA	8215.02	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=15.213;DP=600;FS=6.452;HRun=0;HaplotypeScore=94.9912;InbreedingCoeff=0.9912;MQ=48.31;MQ0=22;MQRankSum=-14.420;QD=40.27;ReadPosRankSum=1.177;VQSLOD=6.0932;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,14:20:21.07:450,21,0	0/0:8,0:8:21.06:0,21,332	0/0:26,0:6:18.06:0,18,299	0/0:25,0:8:24.08:0,24,389	1/1:20,0:20:24.08:392,24,0	0/0:19,0:19:54.17:0,54,893	0/0:26,0:26:69.19:0,69,1138	0/0:38,0:38:99:0,102,1654	1/1:21,0:21:24.33:575,24,0	1/1:3,28:31:84.29:1919,84,0	1/1:3,12:14:15.05:343,15,0	0/0:30,0:30:90.29:0,90,1489	0/0:33,0:33:96.29:0,96,1581	0/0:25,0:25:75.26:0,75,1267	1/1:4,18:22:45.15:1031,45,0	1/1:30,0:30:81.12:1198,81,0	1/1:11,0:11:21.05:317,21,0	1/1:0,11:11:27.09:621,27,0	0/0:14,0:11:33.11:0,33,563	0/0:13,0:13:39.12:0,39,631	0/0:33,0:33:90.29:0,90,1464	0/0:19,0:19:48.16:0,48,816	0/0:16,0:16:45.12:0,45,689	0/0:28,0:28:81.24:0,81,1301	1/1:2,20:23:60.21:1368,60,0	0/0:18,0:18:39.13:0,39,665	0/0:20,0:19:60.21:0,60,1015	0/0:5,0:5:15.02:0,15,201
chr10	42400508	.	TC	T	6409.16	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=11.682;DP=561;FS=13.385;HRun=7;HaplotypeScore=81.2512;InbreedingCoeff=0.9995;MQ=88.37;MQ0=0;MQRankSum=-2.749;QD=25.33;ReadPosRankSum=1.975;VQSLOD=4.4093;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:78.18:0,78,961	0/0:13,0:13:36.10:0,36,439	0/0:33,0:33:87.18:0,87,1040	0/0:16,0:16:41.95:0,42,509	1/1:1,31:32:77.90:765,78,0	0/0:15,0:15:42.10:0,42,489	0/0:24,0:24:63.18:0,63,776	1/1:8,27:35:78.16:789,78,0	1/1:0,16:16:42.10:428,42,0	0/0:13,0:13:36.11:0,36,443	0/0:20,0:20:57.18:0,57,717	0/0:12,0:12:36.12:0,36,453	0/0:18,0:18:51.16:0,51,635	0/0:10,0:10:30.08:0,30,364	0/0:16,0:16:48.15:0,48,593	1/1:0,14:14:39.09:398,39,0	1/1:4,25:29:63.14:642,63,0	0/0:9,0:9:24.03:0,24,279	1/1:4,16:20:48.10:483,48,0	1/1:3,23:26:69.11:694,69,0	1/1:2,13:15:39.09:398,39,0	0/0:19,0:19:51.13:0,51,613	0/0:21,0:21:60.18:0,60,742	0/0:22,0:22:57.17:0,57,705	0/0:19,0:19:57.17:0,57,703	1/1:2,21:23:62.50:619,63,0	1/1:2,20:22:60.14:611,60,0	1/1:0,21:21:57.13:581,57,0
chr10	42401184	.	G	GGTGTGTGTGT	3808.79	PASS	AB=0.774;AC=23;AF=0.411;AN=56;BaseQRankSum=1.798;DP=729;FS=0.530;HRun=0;HaplotypeScore=224.4082;InbreedingCoeff=0.3253;MQ=56.35;MQ0=23;MQRankSum=-5.536;QD=9.16;ReadPosRankSum=-1.678;VQSLOD=2.4304;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:33:24.45:0,24,467	0/0:1,0:12:7.43:0,7,206	0/1:51,0:13:10.01:10,0,53	0/0:51,0:16:1.89:0,2,37	0/1:27,0:27:20.78:21,0,475	1/1:20,5:26:5.66:196,6,0	1/1:16,7:31:15.52:452,16,0	0/0:32,0:31:29.98:0,30,552	0/0:28,0:30:58.38:0,58,1510	0/1:16,0:24:2.55:134,0,3	0/1:9,0:20:14.65:69,0,15	1/1:13,7:25:18.06:699,18,0	1/1:19,6:29:30.90:1127,31,0	1/1:11,10:25:12.35:481,12,0	0/1:8,0:32:17.74:131,0,18	0/0:31,0:31:42.96:0,43,1256	0/0:17,0:22:42.14:0,42,1112	0/1:7,0:15:13.24:37,0,13	0/1:15,0:15:54.37:54,0,320	0/0:17,0:18:24.08:0,24,644	0/0:26,0:26:32.90:0,33,930	1/1:10,5:20:6.49:205,6,0	1/1:14,6:23:5.37:105,5,0	0/1:16,7:27:0:1,0,0	0/1:10,0:22:63.13:87,0,63	0/0:19,0:21:30.08:0,30,728	0/0:27,0:26:53.84:0,54,1422	0/0:9,0:9:9.03:0,9,271
chr10	42402668	.	G	GTA	431.43	PASS	AB=0.877;AC=9;AF=0.161;AN=56;BaseQRankSum=5.997;DP=542;FS=2.305;HRun=0;HaplotypeScore=117.9035;InbreedingCoeff=-0.1839;MQ=44.19;MQ0=13;MQRankSum=1.939;QD=2.36;ReadPosRankSum=3.232;VQSLOD=2.2072;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:39,0:39:23.23:110,0,23	0/0:7,0:7:5.99:0,6,49	0/0:36,0:12:33.12:0,33,299	0/0:28,0:7:14.11:0,14,150	0/0:22,0:20:5.83:0,6,50	0/0:22,0:19:17.66:0,18,144	0/1:13,0:13:5.42:5,0,56	0/0:26,0:24:64.02:0,64,520	0/0:14,0:14:11.19:0,11,95	0/1:15,13:29:99:202,0,218	0/1:18,1:20:10.02:114,0,10	0/0:9,0:9:8.70:0,9,60	0/1:13,0:13:1.85:2,0,78	0/0:15,0:14:7.28:0,7,69	0/1:6,0:15:17.62:18,0,39	0/0:20,0:19:3.34:0,3,121	0/0:16,0:16:26.01:0,26,179	0/1:9,8:17:5.85:6,0,71	0/0:11,0:11:29.84:0,30,235	0/0:23,0:22:20.95:0,21,169	0/0:19,0:19:7.55:0,8,154	0/0:19,0:19:13.41:0,13,199	0/0:13,0:12:11.97:0,12,95	0/1:18,0:18:29.25:29,0,76	0/1:19,0:19:25.86:73,0,26	0/0:20,0:18:47.53:0,48,353	0/0:30,0:29:48.56:0,49,379	0/0:9,0:9:18.66:0,19,122
chr10	42404866	.	TACACACACATACACACACACACATACACAC	T	1408.62	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=-2.933;DP=718;FS=24.756;HRun=0;HaplotypeScore=361.4522;InbreedingCoeff=0.6271;MQ=51.96;MQ0=34;MQRankSum=1.007;QD=13.95;ReadPosRankSum=3.582;VQSLOD=0.4114;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:28:36.13:409,36,0	0/0:11,0:9:2.97:0,3,105	0/0:34,0:6:8.85:0,9,62	0/0:34,0:7:1.28:0,1,60	0/0:19,0:19:15.91:0,16,122	0/0:33,0:31:21.42:0,21,170	0/0:33,0:30:39.97:0,40,795	0/0:33,0:30:32.67:0,33,417	0/0:36,0:34:18.90:0,19,392	0/1:14,0:11:72.62:402,0,73	0/0:1,0:10:1.88:0,2,2	0/0:30,0:29:40.47:0,40,3078	0/0:21,0:20:44.58:0,45,2299	0/0:27,0:27:45.26:0,45,3180	1/1:21,0:21:26.45:430,26,0	0/0:31,0:31:21.02:0,21,686	0/0:40,0:40:88.53:0,89,3566	1/1:9,0:9:20.98:268,21,0	0/0:19,0:16:36.89:0,37,1603	0/0:29,0:27:21.95:0,22,339	0/0:63,0:59:30.38:0,30,264	0/0:18,0:18:27.57:0,28,1305	0/0:20,0:19:21:0,21,830	0/0:32,0:32:50.61:0,51,1821	1/1:1,27:28:2.25:50,2,0	0/0:19,0:18:0.43:0,0,1203	0/0:20,0:20:12.91:0,13,97	0/0:4,0:4:6.67:0,7,699
chr10	42404876	.	T	TAC	4602.52	PASS	AB=0.910;AC=37;AF=0.804;AN=46;BaseQRankSum=-5.204;DP=684;FS=23.244;HRun=0;HaplotypeScore=127.4644;InbreedingCoeff=0.1363;MQ=51.69;MQ0=34;MQRankSum=2.031;QD=8.94;ReadPosRankSum=2.424;VQSLOD=2.9933;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:27:2.99:24,3,0	./.	./.	./.	./.	1/1:35,0:33:2.98:22,3,0	1/1:37,0:34:27.77:439,28,0	1/1:27,0:24:13.90:422,14,0	1/1:33,0:31:3.76:17,4,0	0/1:13,0:10:0.10:1,0,0	./.	0/1:32,0:30:37.38:397,0,37	0/1:20,0:19:22.95:269,0,23	1/1:27,0:27:29.57:387,30,0	0/0:20,0:20:5.26:0,5,22	1/1:26,0:26:8.24:84,8,0	1/1:37,1:37:4.09:652,4,0	1/1:9,0:9:1.33:3,1,0	0/1:14,0:13:5.80:259,0,6	1/1:29,0:27:2.99:24,3,0	0/0:20,39:56:3.01:0,3,37	1/1:21,0:21:19.53:428,20,0	0/1:8,13:21:15.01:45,0,15	1/1:34,0:34:48.70:577,49,0	1/1:28,0:28:2.22:7,2,0	1/1:20,0:19:34.29:361,34,0	1/1:17,0:17:2.90:17,3,0	1/1:5,0:5:10.30:167,10,0
chr10	42404884	.	CACACAT	C	3775.39	PASS	AB=0.957;AC=33;AF=0.635;AN=52;BaseQRankSum=-2.827;DP=675;FS=1.779;HRun=0;HaplotypeScore=162.7148;InbreedingCoeff=-0.0542;MQ=51.91;MQ0=34;MQRankSum=2.136;QD=6.57;ReadPosRankSum=1.284;VQSLOD=2.3584;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:32,0:32:40.99:321,41,0	1/1:9,0:7:8.94:66,9,0	./.	./.	0/1:4,16:20:0.14:0,0,1	0/1:33,0:31:0.48:6,0,0	0/1:38,0:35:11.86:211,0,12	0/1:26,0:22:37.57:169,0,38	1/1:7,26:31:4.83:94,5,0	1/1:15,0:18:23.79:295,24,0	0/0:9,0:9:0:0,0,1	0/1:34,0:32:99:186,0,206	0/1:21,0:20:99:133,0,183	0/1:28,1:29:99:176,0,221	1/1:23,0:22:6.96:126,7,0	1/1:4,22:27:9.01:141,9,0	1/1:33,1:37:62.10:651,62,0	1/1:8,0:8:17.89:136,18,0	0/1:17,0:16:42.92:186,0,43	1/1:4,22:24:4.89:45,5,0	0/1:60,0:54:15.70:27,0,16	0/1:19,0:19:73.21:73,0,193	0/0:23,0:21:1.10:0,1,91	0/1:36,0:35:99:196,0,189	0/0:28,0:28:1.36:0,1,3	1/1:5,14:18:34.74:404,35,0	0/0:3,14:17:3.22:0,3,13	1/1:6,0:5:14.94:133,15,0
chr10	42404888	.	CAT	C	4572.70	PASS	AB=0.992;AC=44;AF=0.846;AN=52;BaseQRankSum=-0.566;DP=655;FS=10.531;HRun=0;HaplotypeScore=132.4082;InbreedingCoeff=0.0135;MQ=51.90;MQ0=33;MQRankSum=1.997;QD=7.33;ReadPosRankSum=-0.305;VQSLOD=3.8778;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:31,0:30:53.73:413,54,0	1/1:12,0:10:0.92:72,1,0	./.	./.	0/1:20,0:20:0.18:0,0,1	1/1:7,24:29:5.23:50,5,0	1/1:39,0:36:49.74:431,50,0	0/1:22,0:18:31.29:170,0,31	1/1:31,0:29:5.85:42,6,0	1/1:21,0:19:30.79:365,31,0	1/1:11,0:11:1.39:22,1,0	1/1:32,0:30:20.85:310,21,0	1/1:19,1:20:0.11:195,0,0	1/1:27,0:27:22.06:258,22,0	1/1:25,0:24:31.29:251,31,0	1/1:25,0:25:8.81:59,9,0	1/1:38,0:37:55.11:481,55,0	1/1:8,0:8:20.57:146,21,0	0/1:18,0:17:50.63:148,0,51	1/1:26,0:24:5:35,5,0	0/1:60,0:54:3.42:126,0,3	0/1:18,1:19:24.50:188,0,25	0/1:19,0:17:15.99:97,0,16	1/1:36,0:35:16.23:295,16,0	1/1:28,0:28:2.80:17,3,0	1/1:19,0:18:33.69:297,34,0	0/0:16,0:16:2.83:0,3,14	1/1:6,0:5:14.86:104,15,0
chr10	42406456	.	G	GTGGC	6682.92	PASS	AB=0.912;AC=13;AF=0.232;AN=56;BaseQRankSum=-11.713;DP=714;FS=3.755;HRun=0;HaplotypeScore=108.8839;InbreedingCoeff=0.8930;MQ=80.10;MQ0=1;MQRankSum=-3.209;QD=35.55;ReadPosRankSum=0.690;VQSLOD=4.5893;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,20:26:33.11:830,33,0	0/0:15,0:15:33.11:0,33,607	0/0:21,0:21:46.39:0,46,728	0/0:13,0:14:15.07:0,15,393	0/0:33,0:33:93.22:0,93,1493	0/0:28,0:28:81.25:0,81,1403	0/0:16,0:16:42.13:0,42,742	0/0:34,0:34:81.25:0,81,1391	0/0:39,0:39:99:0,108,1938	1/1:7,21:29:66.21:1561,66,0	1/1:7,22:29:36.12:949,36,0	0/0:29,0:29:87.30:0,87,1582	0/0:29,0:29:78.24:0,78,1362	0/0:34,0:34:99:0,99,1802	1/1:5,29:35:72.25:1858,72,0	0/0:28,0:28:81.28:0,81,1490	0/0:15,0:15:42.12:0,42,740	1/1:2,10:12:18.06:475,18,0	0/0:8,0:8:21.06:0,21,356	0/0:30,0:30:78.25:0,78,1402	0/0:22,0:21:60.21:0,60,1104	0/0:43,0:43:99:0,117,1964	0/0:28,0:28:75.24:0,75,1324	0/0:17,0:17:51.17:0,51,927	1/1:5,18:26:33.11:871,33,0	0/1:28,3:31:99:139,0,1319	0/0:37,0:37:99:0,105,1859	0/0:6,0:6:18.06:0,18,331
chr10	42407550	.	T	TGATA	9083.66	PASS	AC=34;AF=0.654;AN=52;BaseQRankSum=-7.309;DP=632;FS=11.830;HRun=0;HaplotypeScore=112.8413;InbreedingCoeff=0.9317;MQ=61.31;MQ0=3;MQRankSum=0.805;QD=22.60;ReadPosRankSum=-1.579;VQSLOD=3.6515;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:33:52.70:0,53,787	0/0:12,0:12:15.05:0,15,227	./.	./.	1/1:14,0:26:29.22:362,29,0	1/1:8,17:25:24.08:567,24,0	1/1:17,2:21:7.85:209,8,0	1/1:33,0:33:18.02:291,18,0	1/1:4,12:17:30.10:689,30,0	1/1:18,0:28:13.40:181,13,0	1/1:8,7:17:18.06:420,18,0	0/0:20,0:20:15.05:0,15,234	0/0:21,0:22:42.14:0,42,624	0/0:32,0:32:57.19:0,57,877	1/1:18,9:27:20.98:495,21,0	1/1:5,13:18:21.07:496,21,0	0/0:26,0:26:42.03:0,42,390	1/1:16,0:21:12.04:207,12,0	1/1:11,4:15:12.04:284,12,0	1/1:11,21:34:66.23:1520,66,0	1/1:17,0:18:2.98:22,3,0	0/0:16,0:16:21.07:0,21,321	0/0:12,0:12:30.09:0,30,440	0/0:15,0:15:30.10:0,30,462	1/1:17,20:40:54.19:1275,54,0	1/1:14,11:26:42.14:935,42,0	1/1:12,18:30:39.13:921,39,0	1/1:0,0:6:12.04:209,12,0
chr10	42407565	.	TA	T	785.82	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.179;DP=635;FS=5.960;HRun=1;HaplotypeScore=104.8366;InbreedingCoeff=0.9945;MQ=56.91;MQ0=8;MQRankSum=1.387;QD=35.72;ReadPosRankSum=2.458;VQSLOD=3.4851;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:91.01:0,91,1367	0/0:10,0:10:27.08:0,27,406	0/0:20,0:13:39.11:0,39,556	0/0:13,0:8:22.63:0,23,311	0/0:25,0:25:53.25:0,53,602	0/0:24,0:24:45.11:0,45,552	0/0:17,0:17:48.15:0,48,695	0/0:44,0:44:99:0,132,2005	0/0:20,0:20:51.12:0,51,612	0/0:22,0:22:60:0,60,893	0/0:17,0:17:39.10:0,39,501	0/0:18,0:18:54.16:0,54,794	0/0:22,0:22:64.46:0,64,993	0/0:33,0:33:99:0,99,1504	0/0:25,0:25:66.19:0,66,888	0/0:18,0:18:36.08:0,36,429	1/1:0,22:22:63.21:881,63,0	0/0:24,0:24:57.17:0,57,804	0/0:19,0:15:45.11:0,45,574	0/0:37,0:37:99:0,108,1253	0/0:15,0:15:33.07:0,33,462	0/0:17,0:17:51.16:0,51,769	0/0:14,0:14:39.13:0,39,618	0/0:16,0:16:48.16:0,48,753	0/0:37,0:37:96.21:0,96,1129	0/0:31,0:31:93.26:0,93,1220	0/0:28,0:28:69.15:0,69,813	0/0:11,0:11:27.07:0,27,335
chr10	42408287	.	G	GT	2194	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-0.851;DP=666;FS=0.496;HRun=6;HaplotypeScore=65.9781;InbreedingCoeff=0.9886;MQ=78.65;MQ0=0;MQRankSum=-5.193;QD=30.05;ReadPosRankSum=2.720;VQSLOD=4.3352;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,35:39:93.30:1170,93,0	1/1:1,11:12:33.11:412,33,0	0/0:16,0:16:42.09:0,42,426	0/0:16,0:16:41.56:0,42,393	0/0:42,0:42:99:0,108,1101	0/0:32,0:32:81.17:0,81,826	0/0:22,0:22:60.12:0,60,605	0/0:45,0:45:99:0,105,1071	0/0:23,0:23:66.12:0,66,665	0/0:32,0:32:87.19:0,87,888	0/0:26,0:26:75.13:0,75,745	0/0:22,0:22:66.15:0,66,673	0/0:22,0:22:63.13:0,63,636	0/0:20,0:20:60.14:0,60,612	0/0:22,0:22:63.13:0,63,636	0/0:19,0:19:57.12:0,57,575	1/1:1,21:22:60.19:755,60,0	0/0:21,0:21:63.12:0,63,634	0/0:13,0:13:30.07:0,30,306	0/0:24,0:24:69.16:0,69,704	0/0:20,0:20:54.12:0,54,551	0/0:25,0:25:69.16:0,69,703	0/0:27,0:27:75.17:0,75,765	0/0:16,0:16:42.09:0,42,428	0/0:27,0:27:78.18:0,78,796	0/0:23,1:24:31.41:0,31,635	0/0:30,0:30:84.14:0,84,836	0/0:7,0:7:12.02:0,12,122
chr10	42408413	.	AGT	A	4439.65	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=11.980;DP=668;FS=1.741;HRun=0;HaplotypeScore=84.4367;InbreedingCoeff=0.9515;MQ=62.71;MQ0=6;MQRankSum=1.420;QD=30.41;ReadPosRankSum=2.176;VQSLOD=6.3862;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,31:35:81.26:1042,81,0	1/1:0,5:5:15.05:193,15,0	0/0:28,0:15:33.05:0,33,503	0/0:24,0:16:41.93:0,42,541	0/0:29,0:29:84.29:0,84,1385	1/1:2,22:23:48.16:618,48,0	1/1:5,26:31:72.16:926,72,0	0/0:40,0:40:96.33:0,96,1582	1/1:3,20:23:60.19:772,60,0	0/0:24,0:24:63.19:0,63,1014	0/0:22,0:22:63.21:0,63,1036	0/0:21,0:21:54.18:0,54,907	0/0:26,0:26:66.23:0,66,1112	0/0:33,0:33:96.33:0,96,1613	0/0:23,0:22:63.22:0,63,1063	0/0:15,1:16:9.55:0,10,720	1/1:2,25:27:69.22:888,69,0	0/0:26,0:26:37.41:0,37,1165	0/0:16,0:16:45.14:0,45,726	0/0:28,0:27:63.20:0,63,1024	0/0:21,0:21:57.18:0,57,905	0/0:17,0:17:48.16:0,48,810	0/0:27,0:27:63.22:0,63,1050	0/0:10,0:9:24.07:0,24,379	0/0:37,0:37:96.30:0,96,1563	0/0:30,0:30:81.27:0,81,1344	0/0:20,0:20:60.19:0,60,967	0/0:1,0:1:3.01:0,3,51
chr10	42408966	.	CCT	C	3118.22	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=10.835;DP=761;FS=0.453;HRun=0;HaplotypeScore=98.1231;InbreedingCoeff=0.9985;MQ=81.65;MQ0=0;MQRankSum=-3.779;QD=40.50;ReadPosRankSum=1.036;VQSLOD=5.2926;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:61,0:61:99:0,181,3362	0/0:15,0:15:42.14:0,42,795	0/0:22,0:22:66.20:0,66,1207	0/0:21,0:21:57.19:0,57,1023	0/0:33,0:33:99:0,99,1910	1/1:0,21:21:60.20:918,60,0	1/1:0,24:24:66.22:1011,66,0	0/0:30,0:30:84.28:0,84,1589	1/1:0,32:32:87.30:1332,87,0	0/0:26,0:26:72.24:0,72,1351	0/0:23,0:23:69.18:0,69,1262	0/0:46,0:46:99:0,138,2599	0/0:24,0:24:69.24:0,69,1318	0/0:19,0:19:48.14:0,48,860	0/0:33,0:33:96.32:0,96,1794	0/0:29,0:29:87.30:0,87,1681	0/0:23,0:23:66.21:0,66,1240	0/0:20,0:20:54.19:0,54,1043	0/0:26,0:26:78.27:0,78,1486	0/0:31,0:31:93.32:0,93,1780	0/0:50,0:50:99:0,150,2863	0/0:19,0:19:54.17:0,54,1010	0/0:31,0:31:93.30:0,93,1732	0/0:32,0:32:96.33:0,96,1854	0/0:14,0:14:42.14:0,42,810	0/0:23,0:23:69.23:0,69,1298	0/0:26,0:26:78.27:0,78,1498	0/0:7,0:7:21.07:0,21,406
chr10	42409315	.	A	AT	3944.19	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-12.671;DP=653;FS=3.419;HRun=7;HaplotypeScore=61.0378;InbreedingCoeff=0.9993;MQ=83.38;MQ0=0;MQRankSum=-2.305;QD=31.81;ReadPosRankSum=1.767;VQSLOD=3.9127;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,9:10:27.08:326,27,0	1/1:2,12:14:36.11:435,36,0	0/0:21,0:21:53.25:0,53,500	0/0:17,0:17:45.04:0,45,423	0/0:36,0:36:99:0,99,931	1/1:0,28:28:81.25:979,81,0	1/1:4,19:23:57.17:689,57,0	0/0:43,0:43:99:0,105,1014	1/1:4,24:28:69.21:827,69,0	0/0:16,0:16:39.06:0,39,376	0/0:23,0:23:69.11:0,69,666	0/0:24,0:24:69.10:0,69,661	0/0:29,0:29:78.10:0,78,747	0/0:29,0:29:87.13:0,87,834	0/0:21,0:21:57.09:0,57,550	0/0:18,0:18:48.08:0,48,464	1/1:1,20:21:57.17:689,57,0	0/0:15,0:15:39.02:0,39,368	0/0:16,0:16:42.06:0,42,406	0/0:45,0:45:99:0,129,1246	0/0:29,0:29:75.11:0,75,724	0/0:17,0:17:51.08:0,51,492	0/0:25,0:25:69.10:0,69,661	0/0:22,0:22:66.09:0,66,632	0/0:23,0:23:63.08:0,63,601	0/0:21,0:21:54.07:0,54,517	0/0:28,0:28:78.11:0,78,746	0/0:11,0:11:24.02:0,24,232
chr10	42410115	.	C	CAT	26697.83	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-14.825;DP=705;FS=6.888;HRun=0;HaplotypeScore=73.2923;InbreedingCoeff=0.9995;MQ=80.59;MQ0=6;MQRankSum=-4.659;QD=51.15;ReadPosRankSum=3.260;VQSLOD=5.8658;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,42:42:99:2070,102,0	1/1:1,9:10:27.09:522,27,0	0/0:23,0:23:62.73:0,63,802	0/0:21,0:21:46.26:0,46,619	1/1:2,27:29:78.27:1555,78,0	1/1:0,25:24:63.22:1278,63,0	1/1:0,19:19:48.16:975,48,0	1/1:0,42:43:99:2368,126,0	1/1:1,19:20:51.18:1035,51,0	1/1:0,28:27:78.25:1547,78,0	1/1:1,24:26:72.25:1442,72,0	0/0:22,0:22:66.14:0,66,988	0/0:26,0:26:72.19:0,72,1110	0/0:24,0:24:72.20:0,72,1120	1/1:0,26:26:63.22:1279,63,0	1/1:0,17:17:39.13:792,39,0	1/1:1,34:34:78.27:1583,78,0	1/1:0,23:23:60.21:1217,60,0	1/1:0,32:32:96.31:1890,96,0	1/1:1,27:28:75.26:1516,75,0	1/1:2,26:29:66.18:1299,66,0	0/0:18,0:18:54.12:0,54,824	0/0:30,0:30:90.31:0,90,1463	0/0:19,0:19:54.18:0,54,867	1/1:0,20:20:48.16:975,48,0	1/1:0,25:26:78.22:1475,78,0	1/1:2,26:29:69.20:1395,69,0	1/1:0,12:12:24.08:487,24,0
chr10	42479385	.	AACC	A	16008.07	PASS	AC=38;AF=0.704;AN=54;BaseQRankSum=10.911;DP=574;FS=8.954;HRun=0;HaplotypeScore=101.6087;InbreedingCoeff=0.9942;MQ=88.96;MQ0=0;MQRankSum=-6.299;QD=40.84;ReadPosRankSum=3.294;VQSLOD=6.2592;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,41:41:99:1786,111,0	1/1:0,7:7:12.04:200,12,0	0/0:31,1:32:68.57:0,69,1859	0/0:24,0:24:57.41:0,57,1363	1/1:2,14:16:36.08:548,36,0	1/1:1,19:20:51.17:838,51,0	1/1:1,26:27:66.23:1099,66,0	1/1:2,24:26:69.17:1060,69,0	1/1:0,25:25:63.22:1049,63,0	0/0:17,0:17:48.16:0,48,1087	0/0:10,0:10:27.09:0,27,600	1/1:1,13:14:39.13:649,39,0	1/1:1,18:19:44.96:749,45,0	1/1:0,13:13:36.12:600,36,0	0/0:31,0:31:90.31:0,90,2038	1/1:0,15:15:39.13:650,39,0	1/1:1,33:34:78.27:1287,78,0	0/0:23,0:23:60.21:0,60,1360	1/1:0,15:15:45.15:738,45,0	1/1:0,21:21:60.16:936,60,0	1/1:1,22:23:57.19:913,57,0	1/1:1,11:12:27.09:427,27,0	1/1:1,19:20:57.19:928,57,0	1/1:0,17:17:27.09:450,27,0	0/0:19,0:19:54.19:0,54,1210	0/0:26,0:26:72.25:0,72,1616	1/1:1,26:27:66.10:1099,66,0	./.
chr10	42479734	.	CA	C	13866.41	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=6.352;DP=711;FS=1.833;HRun=7;HaplotypeScore=77.7134;InbreedingCoeff=0.9942;MQ=79.30;MQ0=0;MQRankSum=-1.907;QD=26.67;ReadPosRankSum=4.188;VQSLOD=5.5010;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,41:43:99:1224,120,0	1/1:0,6:6:12.03:122,12,0	0/0:29,0:30:74.81:0,75,870	0/0:20,0:20:42.13:0,42,516	1/1:0,25:25:63.14:641,63,0	1/1:3,16:19:45.10:459,45,0	1/1:1,18:19:48.11:490,48,0	1/1:5,26:31:78.14:781,78,0	1/1:1,21:22:60.13:612,60,0	0/0:24,0:24:66.21:0,66,821	0/0:18,0:18:45.13:0,45,546	1/1:3,28:31:81.18:826,81,0	1/1:1,24:25:69.16:704,69,0	1/1:3,35:38:90.20:918,90,0	0/0:38,0:38:99:0,108,1334	1/1:2,31:33:84.19:857,84,0	1/1:1,28:29:78.18:796,78,0	0/0:20,0:20:60.19:0,60,755	1/1:4,22:26:66.14:673,66,0	1/1:1,17:18:51.11:519,51,0	1/1:1,27:28:69.16:704,69,0	1/1:1,19:20:57.13:581,57,0	1/1:1,27:28:68.55:703,69,0	1/1:1,27:28:81.18:826,81,0	0/0:23,0:23:69.22:0,69,868	0/0:17,1:18:23.55:0,24,606	1/1:2,40:42:99:1194,117,0	1/1:2,7:9:26.26:236,26,0
chr10	42480101	.	A	AGAATGCTTGCC	19814.25	PASS	AB=0.650;AC=54;AF=0.964;AN=56;BaseQRankSum=-3.192;DP=223;FS=19.220;HRun=0;HaplotypeScore=196.3589;InbreedingCoeff=-0.0617;MQ=57.33;MQ0=0;MQRankSum=-2.118;QD=88.85;ReadPosRankSum=-1.310;VQSLOD=3.2998;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:15:32.75:1299,33,0	1/1:3,0:3:6.02:124,6,0	0/1:2,1:6:11.42:555,0,11	0/1:4,0:6:33.76:304,0,34	1/1:7,0:7:15.05:441,15,0	1/1:7,0:7:21.07:776,21,0	1/1:10,0:10:30.10:1144,30,0	1/1:10,0:10:23.86:561,24,0	1/1:11,0:11:29.79:1063,30,0	1/1:11,0:11:10.22:932,10,0	1/1:7,0:7:21.07:700,21,0	1/1:5,0:5:15.04:351,15,0	1/1:18,0:18:27.69:1613,28,0	1/1:9,0:9:20.38:882,20,0	1/1:6,0:6:18.06:751,18,0	1/1:11,0:11:17.44:1047,17,0	1/1:11,0:11:17.18:685,17,0	1/1:4,0:4:9.03:457,9,0	1/1:9,0:9:14.38:680,14,0	1/1:4,0:4:12.01:403,12,0	1/1:9,0:9:21.07:785,21,0	1/1:8,0:8:24.07:791,24,0	1/1:2,0:2:6.02:154,6,0	1/1:3,0:3:9.03:377,9,0	1/1:8,0:8:17.66:934,18,0	1/1:13,0:13:27.07:1070,27,0	1/1:8,0:8:21.07:795,21,0	1/1:1,0:1:3.01:142,3,0
chr10	42480199	.	A	AG	348.22	PASS	AB=0.850;AC=9;AF=0.180;AN=50;BaseQRankSum=3.425;DP=196;FS=1.565;HRun=1;HaplotypeScore=43.5619;InbreedingCoeff=-0.0300;MQ=43.02;MQ0=7;MQRankSum=-0.682;QD=7.11;ReadPosRankSum=-0.828;VQSLOD=0.4337;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:4,3:7:29.11:29,0,121	0/1:2,5:6:20.73:204,0,21	./.	./.	0/0:9,0:9:24.06:0,24,296	0/0:13,0:13:36.05:0,36,443	0/0:11,0:10:27.09:0,27,348	0/1:11,0:9:51.06:51,0,158	0/0:14,0:14:42.14:0,42,540	0/0:11,0:11:32.98:0,33,386	0/0:17,0:16:47.90:0,48,528	0/0:5,0:5:15.05:0,15,194	0/0:5,0:5:15.05:0,15,193	0/0:10,0:9:24.08:0,24,307	0/0:3,0:3:8.96:0,9,96	0/0:2,0:2:5.95:0,6,57	0/1:6,6:10:56.65:157,0,57	0/0:7,0:6:12.50:0,13,145	0/0:3,0:3:8.97:0,9,81	0/1:4,0:4:1.94:2,0,7	./.	0/0:7,0:7:15.03:0,15,178	0/0:6,0:6:18.06:0,18,231	0/0:6,0:6:15.05:0,15,194	0/0:13,0:11:29.02:0,29,315	0/1:5,0:5:16.62:17,0,29	0/1:2,0:2:1.86:2,0,17	1/1:1,0:1:1.25:3,1,0
chr10	42480408	.	T	TAC	52.87	PASS	AB=0.824;AC=6;AF=0.107;AN=56;BaseQRankSum=4.035;DP=551;FS=8.565;HRun=0;HaplotypeScore=84.2602;InbreedingCoeff=0.5770;MQ=72.52;MQ0=23;MQRankSum=-0.384;QD=0.91;ReadPosRankSum=-1.850;VQSLOD=0.5883;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:69.66:0,70,1014	0/0:8,0:8:21.06:0,21,296	0/0:68,0:28:80.96:0,81,1171	0/0:64,0:25:59.59:0,60,727	0/0:11,0:11:20.93:0,21,239	0/1:5,6:11:1.02:38,0,1	1/1:20,0:20:0.24:20,0,0	0/0:21,0:20:53.18:0,53,743	1/1:15,0:15:14.62:105,15,0	0/0:14,0:14:42.14:0,42,660	0/0:6,0:6:15.01:0,15,203	0/0:10,0:10:4.76:0,5,248	0/0:18,0:18:45.14:0,45,701	0/0:25,0:25:69.13:0,69,1056	0/0:17,0:17:33.11:0,33,518	0/0:13,0:11:27:0,27,372	0/0:21,0:21:41.95:0,42,582	0/0:16,0:15:24.08:0,24,366	0/1:12,0:12:5.54:6,0,443	0/0:9,0:9:8.46:0,8,352	0/0:31,0:31:48.37:0,48,632	0/0:14,0:14:39.13:0,39,626	0/0:15,0:15:42.13:0,42,642	0/0:34,0:34:90.30:0,90,1418	0/0:12,0:12:33.10:0,33,519	0/0:16,0:16:44.74:0,45,602	0/0:11,0:11:29.77:0,30,367	0/0:6,0:6:14.92:0,15,197
chr10	42480409	.	T	TCACA	1117.13	PASS	AB=1.000;AC=28;AF=0.519;AN=54;BaseQRankSum=1.947;DP=599;FS=11.472;HRun=0;HaplotypeScore=127.0752;InbreedingCoeff=0.4908;MQ=69.52;MQ0=23;MQRankSum=-1.905;QD=3.42;ReadPosRankSum=-2.722;VQSLOD=1.3179;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:3.08:0,3,61	0/0:8,0:8:6.45:0,6,51	0/1:68,0:28:0:0,0,0	./.	1/1:13,0:13:7.27:128,7,0	1/1:14,0:14:3.01:43,3,0	1/1:26,0:26:3.14:149,3,0	1/1:19,0:18:6.85:76,7,0	1/1:20,0:20:17.73:179,18,0	0/1:12,0:16:33.34:33,0,46	0/0:2,0:6:6.01:0,6,56	0/1:10,0:10:10.92:11,0,40	0/0:18,0:18:21.05:0,21,302	0/0:26,0:26:24.07:0,24,347	0/0:8,0:17:9.01:0,9,84	1/1:20,0:18:2.95:53,3,0	0/0:21,0:21:20.83:0,21,193	0/0:5,0:14:15.02:0,15,140	1/1:16,0:16:11.87:189,12,0	1/1:10,0:10:3.01:39,3,0	1/1:23,13:40:3.48:71,3,0	0/0:15,0:15:21.06:0,21,303	0/0:15,0:15:9.50:0,10,140	0/0:34,0:34:33.04:0,33,441	0/1:14,0:15:7.72:8,0,97	1/1:14,4:22:14.95:174,15,0	1/1:9,2:11:2.80:70,3,0	1/1:4,2:6:3.01:70,3,0
chr10	42480450	.	CACAT	C	794.81	PASS	AB=0.905;AC=7;AF=0.125;AN=56;BaseQRankSum=1.984;DP=575;FS=0.000;HRun=0;HaplotypeScore=96.6916;InbreedingCoeff=0.2575;MQ=61.48;MQ0=10;MQRankSum=-0.005;QD=5.93;ReadPosRankSum=2.252;VQSLOD=1.7880;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:3,30:33:14.71:54,0,15	0/0:5,0:5:2.84:0,3,9	0/0:30,0:20:39.56:0,40,503	0/0:22,0:12:35.92:0,36,327	0/0:16,0:16:29.96:0,30,248	0/1:17,0:17:2.51:164,0,3	0/1:23,0:23:33.29:190,0,33	0/0:24,0:23:68.61:0,69,670	0/1:25,0:24:96.65:97,0,267	0/0:17,0:17:25.76:0,26,358	0/0:10,0:10:20.95:0,21,168	0/0:16,0:16:42.03:0,42,570	0/0:13,0:12:36.01:0,36,730	0/0:22,0:22:53.90:0,54,846	0/0:17,0:17:32.93:0,33,268	0/0:27,0:25:41.82:0,42,370	1/1:3,22:24:24.51:417,25,0	0/0:21,0:20:18.08:0,18,268	0/0:18,0:18:49.70:0,50,522	0/0:12,0:11:27.01:0,27,305	0/0:54,0:53:86.61:0,87,897	0/0:14,0:14:39.05:0,39,659	0/1:11,0:11:5.95:6,0,281	0/0:38,0:38:84.10:0,84,1384	0/0:13,0:13:2.62:0,3,130	0/0:28,0:28:77.06:0,77,884	0/0:15,0:14:32.56:0,33,328	0/0:9,0:9:23.97:0,24,283
chr10	42480452	.	CAT	C	820.20	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=4.403;DP=564;FS=8.096;HRun=0;HaplotypeScore=79.1306;InbreedingCoeff=0.6331;MQ=62.66;MQ0=8;MQRankSum=-1.014;QD=5.13;ReadPosRankSum=2.681;VQSLOD=1.8537;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:33,0:33:5.99:51,6,0	1/1:0,4:4:6.02:79,6,0	0/0:29,0:21:42.56:0,43,529	0/0:20,0:12:35.92:0,36,327	0/0:16,0:16:23.95:0,24,195	1/1:17,0:17:28.64:236,29,0	1/1:22,1:23:16.68:249,17,0	0/0:24,0:23:62.45:0,62,543	0/1:25,0:24:55.30:147,0,55	0/0:17,0:17:27.84:0,28,283	0/1:10,0:10:3.09:3,0,102	0/0:16,0:16:38.99:0,39,394	0/0:15,0:14:41.99:0,42,541	0/0:19,0:19:17.79:0,18,546	0/0:18,0:18:9.38:0,9,198	0/0:29,0:27:47.88:0,48,388	1/1:25,0:24:24.44:208,24,0	0/1:23,0:22:17.11:17,0,204	0/0:22,0:22:55.71:0,56,478	0/0:12,0:11:20.99:0,21,192	0/0:49,0:48:83.73:0,84,713	0/0:14,0:14:36.01:0,36,402	0/0:8,0:8:18.02:0,18,223	0/0:35,0:35:71.58:0,72,811	0/0:12,0:12:2.09:0,2,113	0/0:26,0:26:68.64:0,69,667	0/0:14,0:13:32.79:0,33,279	0/0:9,0:9:23.97:0,24,224
chr10	42480829	.	TGG	T	3749.02	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=14.257;DP=607;FS=1.978;HRun=2;HaplotypeScore=96.1338;InbreedingCoeff=0.9946;MQ=72.18;MQ0=0;MQRankSum=-13.753;QD=38.26;ReadPosRankSum=0.822;VQSLOD=3.8098;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,13:15:14.53:469,15,0	1/1:0,6:6:18.03:259,18,0	0/0:22,0:22:63.21:0,63,1215	0/0:18,0:17:50.49:0,50,859	0/0:34,0:34:99:0,102,2027	1/1:3,22:25:66.21:1004,66,0	1/1:0,20:20:48.16:755,48,0	0/0:38,0:38:99:0,114,2278	1/1:4,15:19:48.16:750,48,0	0/0:21,0:21:63.22:0,63,1277	0/0:22,0:22:66.23:0,66,1341	0/0:24,0:24:72.25:0,72,1452	0/0:23,0:23:69.24:0,69,1402	0/0:19,0:19:57.20:0,57,1157	0/0:31,0:31:93.32:0,93,1885	0/0:17,0:17:51.16:0,51,1001	1/1:1,12:13:33.11:512,33,0	0/0:24,0:24:69.19:0,69,1357	0/0:18,0:18:54.17:0,54,1052	0/0:35,0:35:99:0,102,2063	0/0:14,0:14:42.14:0,42,842	0/0:15,0:15:45.15:0,45,913	0/0:21,0:21:60.21:0,60,1219	0/0:30,0:30:90.26:0,90,1703	0/0:18,0:18:54.17:0,54,1048	0/0:29,0:29:87.30:0,87,1760	0/0:25,0:25:75.26:0,75,1520	0/0:11,0:11:33.11:0,33,666
chr10	42480834	.	GA	G	3109.61	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=14.939;DP=612;FS=0.867;HRun=2;HaplotypeScore=84.8091;InbreedingCoeff=0.9979;MQ=68.95;MQ0=0;MQRankSum=-14.122;QD=32.06;ReadPosRankSum=-0.258;VQSLOD=3.2609;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,15:15:35.83:404,36,0	1/1:0,6:6:17.27:197,17,0	0/0:22,0:22:66.19:0,66,956	0/0:16,0:15:45.14:0,45,642	0/0:34,0:34:99:0,102,1524	1/1:0,24:24:69.22:861,69,0	1/1:1,20:21:63.19:768,63,0	0/0:38,0:38:99:0,111,1664	1/1:0,17:17:48.15:592,48,0	0/0:21,0:21:63.21:0,63,940	0/0:25,0:25:75.25:0,75,1122	0/0:24,0:24:72.23:0,72,1057	0/0:23,0:23:69.23:0,69,1032	0/0:22,0:22:63.20:0,63,919	0/0:34,0:34:96.30:0,96,1398	0/0:19,0:19:57.19:0,57,849	1/1:2,12:14:39.12:475,39,0	0/0:25,0:25:75.21:0,75,1099	0/0:20,0:19:57.19:0,57,832	0/0:36,0:36:99:0,105,1571	0/0:15,0:15:45.14:0,45,654	0/0:14,0:14:42.14:0,42,630	0/0:21,0:21:63.21:0,63,942	0/0:27,0:27:81.27:0,81,1209	0/0:15,0:15:45.15:0,45,674	0/0:28,0:28:81.27:0,81,1195	0/0:26,0:26:78.24:0,78,1124	0/0:10,0:10:30.10:0,30,450
chr10	42481809	.	T	TA	9166.89	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=-17.050;DP=606;FS=6.128;HRun=8;HaplotypeScore=68.4487;InbreedingCoeff=0.9414;MQ=80.77;MQ0=0;MQRankSum=-1.838;QD=27.28;ReadPosRankSum=-1.376;VQSLOD=5.0000;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:90.07:0,90,800	0/0:14,0:14:39.02:0,39,357	0/0:20,0:20:39.37:0,39,337	0/1:11,0:11:0.51:1,0,167	1/1:2,32:34:93.28:1073,93,0	0/0:28,0:28:78:0,78,713	0/0:19,0:19:47.67:0,48,417	1/1:9,31:40:68.75:1001,69,0	0/0:18,0:18:53.52:0,54,463	1/1:1,20:22:63.17:716,63,0	1/1:4,16:20:48.10:539,48,0	0/0:22,0:22:54:0,54,485	0/0:26,0:26:78.03:0,78,710	0/0:15,0:15:11.43:0,11,273	1/1:2,20:22:54.16:623,54,0	1/1:1,15:16:45.13:519,45,0	0/0:22,0:22:60.16:0,60,533	1/1:1,12:13:27.08:312,27,0	1/1:7,17:24:57.16:651,57,0	1/1:3,27:30:58.39:872,58,0	1/1:1,7:8:18.05:207,18,0	0/0:18,0:18:45.02:0,45,412	0/0:24,0:24:63.03:0,63,577	0/0:11,0:11:24.01:0,24,220	1/1:4,27:31:26.31:811,26,0	1/1:2,24:26:72.21:831,72,0	1/1:4,33:37:65.04:947,65,0	1/1:0,2:2:6.01:64,6,0
chr10	42484271	.	CATTAGA	C	6008.72	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=14.670;DP=691;FS=2.558;HRun=0;HaplotypeScore=161.4932;InbreedingCoeff=0.9981;MQ=83.99;MQ0=0;MQRankSum=-14.542;QD=60.69;ReadPosRankSum=1.547;VQSLOD=5.3569;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,22:23:45.15:1105,45,0	1/1:1,8:9:21.07:515,21,0	0/0:25,0:25:69.19:0,69,2156	0/0:19,0:19:51.16:0,51,1561	0/0:18,0:18:54.19:0,54,1920	1/1:0,19:19:51.18:1252,51,0	1/1:0,11:11:30.10:736,30,0	0/0:46,0:46:99:0,135,4426	1/1:1,22:24:69.24:1689,69,0	0/0:42,0:42:99:0,120,4269	0/0:15,0:15:45.15:0,45,1612	0/0:29,0:29:87.30:0,87,3067	0/0:38,0:38:99:0,111,3775	0/0:29,0:29:87.28:0,87,3060	0/0:29,0:29:84.29:0,84,3079	0/0:31,0:31:93.32:0,93,3311	1/1:1,12:13:30.10:712,30,0	0/0:22,0:22:66.23:0,66,2375	0/0:16,0:16:45.14:0,45,1450	0/0:23,0:23:69.23:0,69,2384	0/0:39,0:39:99:0,117,4063	0/0:27,0:27:81.26:0,81,2826	0/0:26,0:26:78.27:0,78,2767	0/0:24,0:24:72.25:0,72,2603	0/0:25,0:25:75.25:0,75,2655	0/0:33,0:33:99:0,99,3544	0/0:29,0:29:81.28:0,81,2888	0/0:7,0:7:21.07:0,21,769
chr10	42484642	.	AT	A	2273.88	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.512;DP=823;FS=2.316;HRun=1;HaplotypeScore=88.3027;InbreedingCoeff=0.9707;MQ=82.86;MQ0=1;MQRankSum=-2.085;QD=35.53;ReadPosRankSum=2.608;VQSLOD=4.0313;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:65,0:65:99:0,196,3067	0/0:13,0:13:39.11:0,39,597	0/0:24,0:24:69.12:0,69,1009	0/0:23,0:23:65.15:0,65,902	1/1:0,28:28:81.20:1108,81,0	0/0:27,0:27:81.26:0,81,1259	0/0:30,0:30:90.26:0,90,1367	0/0:28,0:28:84.26:0,84,1280	0/0:21,0:21:63.21:0,63,1004	0/0:29,0:29:87.27:0,87,1327	0/0:21,0:21:63.20:0,63,975	0/0:35,0:35:99:0,105,1625	0/0:39,0:39:99:0,117,1869	0/0:31,0:31:93.32:0,93,1482	0/0:36,0:36:99:0,108,1680	1/1:1,35:36:93.14:1288,93,0	0/0:53,0:53:99:0,160,2516	0/0:11,0:11:33.11:0,33,527	0/0:28,0:28:84.23:0,84,1250	0/0:16,0:16:48.16:0,48,767	0/0:46,0:45:99:0,135,2123	0/0:29,0:29:87.28:0,87,1367	0/0:21,0:21:63.19:0,63,951	0/0:46,0:46:99:0,132,2061	0/0:31,0:31:93.30:0,93,1462	0/0:28,0:28:84.29:0,84,1342	0/0:25,0:25:75.21:0,75,1127	0/0:3,0:3:9.03:0,9,135
chr10	42485218	.	CG	C	10111.39	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=6.262;DP=754;FS=2.774;HRun=6;HaplotypeScore=85.1027;InbreedingCoeff=0.9920;MQ=83.44;MQ0=0;MQRankSum=-2.864;QD=28.32;ReadPosRankSum=1.952;VQSLOD=5.4938;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,102,1309	0/0:13,0:13:36.12:0,36,474	0/0:33,0:33:75.07:0,75,916	0/0:24,0:24:48.07:0,48,599	1/1:1,27:28:75.19:805,75,0	0/0:2,0:16:34.50:0,35,177	0/0:3,0:27:54.63:0,55,280	1/1:0,23:23:69.17:741,69,0	0/0:1,0:26:72:0,72,379	1/1:2,34:36:99:1088,102,0	1/1:1,24:25:69.13:728,69,0	0/0:41,0:41:99:0,114,1482	0/0:31,0:31:84.25:0,84,1076	0/0:30,0:30:87.17:0,87,1108	1/1:2,36:38:93.23:999,93,0	1/1:3,29:32:81.20:870,81,0	0/0:38,0:38:99:0,102,1316	1/1:2,15:17:45.11:483,45,0	1/1:3,21:24:63.13:666,63,0	1/1:2,28:30:84.20:894,84,0	1/1:0,18:18:51.13:548,51,0	0/0:34,0:34:99:0,99,1271	0/0:24,0:24:69.22:0,69,906	0/0:21,0:22:63.06:0,63,789	1/1:2,27:29:72.18:774,72,0	1/1:3,19:22:57.14:612,57,0	1/1:1,28:29:75.19:806,75,0	1/1:0,6:6:9.02:97,9,0
chr10	42487105	.	T	TAAGTCGTATGA	19345.58	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-6.963;DP=677;FS=8.411;HRun=0;HaplotypeScore=202.1900;InbreedingCoeff=0.9998;MQ=79.51;MQ0=0;MQRankSum=-16.850;QD=131.60;ReadPosRankSum=1.021;VQSLOD=4.8707;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,12:33:75.26:4120,75,0	1/1:5,10:16:36.08:1917,36,0	0/0:20,0:20:57.18:0,57,1612	0/0:21,0:21:51.09:0,51,1442	0/0:29,0:29:81.28:0,81,2829	1/1:9,10:22:51.14:2735,51,0	1/1:7,12:22:60.21:3248,60,0	0/0:31,0:31:87.26:0,87,2649	1/1:3,20:24:63.22:3584,63,0	0/0:23,0:23:69.24:0,69,2375	0/0:23,0:23:69.22:0,69,2272	0/0:24,0:24:66.21:0,66,2161	0/0:33,0:33:93.30:0,93,3138	0/0:29,0:29:84.29:0,84,2923	0/0:29,0:29:84.26:0,84,2774	0/0:18,0:18:54.19:0,54,1913	1/1:14,12:30:69.24:3742,69,0	0/0:11,0:11:30.10:0,30,1030	0/0:14,0:14:42.08:0,42,1231	0/0:30,0:30:87.30:0,87,3010	0/0:30,0:30:90.29:0,90,2996	0/0:35,0:35:99:0,99,3339	0/0:19,0:19:54.19:0,54,1784	0/0:19,0:19:54.16:0,54,1749	0/0:22,0:22:66.20:0,66,2063	0/0:29,0:29:87.30:0,87,3034	0/0:28,0:28:78.25:0,78,2601	0/0:13,0:13:39.13:0,39,1391
chr10	42488183	.	CAT	C	4745.20	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=12.266;DP=771;FS=2.897;HRun=0;HaplotypeScore=88.8455;InbreedingCoeff=0.9985;MQ=91.77;MQ0=0;MQRankSum=-2.509;QD=45.19;ReadPosRankSum=3.753;VQSLOD=6.2824;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,52:52:99:2348,144,0	1/1:0,12:12:36.12:587,36,0	0/0:31,0:31:90.31:0,90,1820	0/0:32,0:32:82.12:0,82,1781	0/0:18,0:18:54.19:0,54,1086	0/0:23,0:23:66.23:0,66,1340	0/0:31,0:31:93.32:0,93,1888	0/0:25,0:25:75.26:0,75,1524	0/0:21,0:21:63.22:0,63,1280	0/0:32,0:32:96.33:0,96,1918	0/0:23,0:23:69.24:0,69,1401	0/0:26,0:26:78.27:0,78,1557	0/0:34,0:34:99:0,99,1995	0/0:31,0:31:93.31:0,93,1852	0/0:30,0:30:90.31:0,90,1801	0/0:32,0:32:96.33:0,96,1950	1/1:0,41:41:99:1810,111,0	0/0:24,0:24:72.25:0,72,1442	0/0:23,0:23:69.23:0,69,1367	0/0:29,0:29:87.30:0,87,1764	0/0:50,0:50:99:0,148,2968	0/0:26,0:26:78.27:0,78,1584	0/0:20,0:20:60.21:0,60,1219	0/0:18,0:18:54.19:0,54,1095	0/0:27,0:27:81.26:0,81,1593	0/0:26,0:26:78.27:0,78,1585	0/0:27,0:26:81.28:0,81,1627	0/0:7,0:7:21.07:0,21,426
chr10	42488541	.	ACTGTGTCTTGG	A	2034.58	PASS	AC=10;AF=0.185;AN=54;BaseQRankSum=5.110;DP=688;FS=11.721;HRun=0;HaplotypeScore=230.2713;InbreedingCoeff=0.8665;MQ=69.10;MQ0=0;MQRankSum=-5.286;QD=14.64;ReadPosRankSum=1.403;VQSLOD=1.4919;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:78.25:0,78,3569	0/0:11,0:11:18.06:0,18,878	0/0:18,0:17:18.06:0,18,480	0/0:19,0:19:30.10:0,30,1073	0/0:24,0:24:18.06:0,18,939	0/0:20,0:20:21.06:0,21,904	0/0:28,0:28:54.17:0,54,2435	1/1:40,0:40:4.23:49,4,0	0/0:21,0:21:51.18:0,51,2351	0/0:23,0:23:15.05:0,15,757	0/0:16,0:16:12.04:0,12,626	0/0:27,0:27:42.14:0,42,2255	0/0:26,0:26:51.12:0,51,2188	0/0:23,0:23:36.12:0,36,1917	0/0:27,0:27:48.15:0,48,2260	0/0:25,0:25:54.17:0,54,2730	0/0:46,0:46:99:0,111,5724	0/0:21,0:21:42.14:0,42,1884	1/1:21,2:22:6:111,6,0	1/1:19,6:25:12.35:407,12,0	0/0:31,5:35:1.36:0,1,2	0/0:22,0:22:18.06:0,18,955	0/0:17,0:17:12.04:0,12,623	0/0:25,0:25:42.14:0,42,2179	0/0:22,0:22:30.06:0,30,1079	1/1:11,5:16:12.03:269,12,0	1/1:19,16:35:42.14:1353,42,0	./.
chr10	42489488	.	G	GCACA	2260.36	PASS	AB=0.753;AC=30;AF=0.600;AN=50;BaseQRankSum=-0.804;DP=553;FS=8.903;HRun=0;HaplotypeScore=108.2260;InbreedingCoeff=0.3463;MQ=66.39;MQ0=16;MQRankSum=0.379;QD=6.91;ReadPosRankSum=-4.084;VQSLOD=0.2224;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:25:5.97:67,6,0	1/1:5,0:5:3.01:52,3,0	./.	./.	0/0:12,0:21:9.01:0,9,83	0/1:14,3:20:32.62:84,0,33	1/1:21,6:32:11.64:224,12,0	1/1:20,0:20:26.93:344,27,0	1/1:10,2:17:5.71:32,6,0	1/1:11,0:11:2.74:12,3,0	1/1:13,0:19:8.23:37,8,0	0/0:17,0:17:12.04:0,12,172	0/0:23,0:25:45.15:0,45,665	0/0:12,0:13:8.59:0,9,244	0/1:8,0:14:29.93:44,0,30	0/0:7,0:16:21.02:0,21,195	./.	0/1:14,0:18:43.91:44,0,263	1/1:13,0:13:12.04:174,12,0	1/1:13,1:15:5.75:69,6,0	0/1:21,1:31:3.47:3,0,67	0/0:23,0:24:8.53:0,9,236	1/1:11,5:18:11.50:166,12,0	0/0:31,0:34:42.10:0,42,560	0/1:13,0:21:26.43:26,0,104	0/1:7,5:13:22.66:356,0,23	1/1:15,11:30:32.14:678,32,0	1/1:1,0:1:2.98:22,3,0
chr10	42489529	.	C	CCACAT	121.21	PASS	AB=1.000;AC=6;AF=0.107;AN=56;BaseQRankSum=6.678;DP=539;FS=1.702;HRun=0;HaplotypeScore=124.7414;InbreedingCoeff=0.4444;MQ=63.56;MQ0=6;MQRankSum=2.071;QD=1.44;ReadPosRankSum=0.223;VQSLOD=2.4844;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:31:1.54:44,2,0	1/1:1,1:9:8.13:82,8,0	0/0:28,0:19:46.63:0,47,751	0/0:20,0:13:29.29:0,29,472	0/0:24,0:24:39.07:0,39,681	0/0:28,0:28:47.97:0,48,942	0/1:18,0:19:2.26:2,0,366	0/0:19,0:19:48.09:0,48,848	0/0:19,0:19:39.07:0,39,682	0/0:19,0:17:50.57:0,51,835	0/0:15,0:15:24.07:0,24,361	0/0:13,0:13:33.11:0,33,659	0/0:29,0:29:78.25:0,78,1589	0/0:13,0:13:39.11:0,39,740	0/0:14,0:14:29.96:0,30,356	0/0:12,0:12:30.10:0,30,491	0/0:1,0:11:2.94:0,3,18	0/0:22,0:22:66.06:0,66,1087	0/0:21,0:21:51.68:0,52,931	0/0:17,0:17:17.53:0,18,272	0/0:17,0:16:20.42:0,20,333	0/0:20,0:20:48.16:0,48,915	0/0:18,0:18:21.30:0,21,512	0/0:28,0:28:78.24:0,78,1502	0/0:22,0:22:42.02:0,42,723	0/0:21,0:21:17.23:0,17,714	0/1:23,0:23:99:102,0,437	0/0:4,0:4:2.96:0,3,57
chr10	42489777	.	GT	G	615.66	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=4.540;DP=537;FS=0.000;HRun=8;HaplotypeScore=64.3550;InbreedingCoeff=0.9578;MQ=77.08;MQ0=0;MQRankSum=-4.252;QD=18.66;ReadPosRankSum=0.892;VQSLOD=3.4472;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,10:15:30.04:290,30,0	1/1:1,3:4:9.01:87,9,0	0/0:20,0:20:47.92:0,48,492	0/0:11,0:11:20.90:0,21,198	0/0:28,0:28:66.20:0,66,797	0/0:28,0:28:69.45:0,69,419	0/0:16,0:16:43.75:0,44,253	0/0:30,1:31:52.24:0,52,875	0/0:20,0:20:10.10:0,10,250	0/0:24,0:24:60.16:0,60,700	0/0:16,0:17:48.01:0,48,558	0/0:22,0:22:60.17:0,60,713	0/0:26,0:26:69.19:0,69,812	0/0:17,0:17:48.15:0,48,578	0/0:24,0:24:66.20:0,66,790	0/0:22,0:22:60.08:0,60,691	1/1:1,13:14:39.06:377,39,0	0/0:16,0:16:48.15:0,48,580	0/0:22,0:22:53.33:0,53,622	0/0:24,0:24:69.21:0,69,834	0/0:16,0:16:39.12:0,39,471	0/0:18,0:18:43.31:0,43,561	0/0:18,0:18:42.13:0,42,507	0/0:14,0:14:33.10:0,33,399	0/0:20,0:20:51.16:0,51,616	0/0:19,0:19:51.16:0,51,616	0/0:21,0:21:57.15:0,57,673	0/0:10,0:10:18.06:0,18,217
chr10	42489864	.	G	GCAAACAGGTCAC	55467.69	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-1.686;DP=688;FS=0.299;HRun=0;HaplotypeScore=217.7631;InbreedingCoeff=0.9937;MQ=66.27;MQ0=0;MQRankSum=-18.329;QD=129.90;ReadPosRankSum=-5.704;VQSLOD=3.6945;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,17:30:69.19:3406,69,0	1/1:6,8:15:42.14:2240,42,0	0/0:13,0:14:32.49:0,32,889	0/0:12,0:12:24.08:0,24,747	1/1:15,12:34:60.17:2485,60,0	0/0:37,0:37:99:0,108,3892	0/0:19,0:19:57.19:0,57,1942	1/1:26,9:41:99:5217,111,0	0/0:25,0:25:69.24:0,69,2484	1/1:14,21:42:99:6440,123,0	1/1:7,7:21:42.10:1777,42,0	0/0:32,0:32:87.30:0,87,3238	0/0:28,0:28:78.25:0,78,2775	0/0:19,0:19:54.18:0,54,1874	1/1:10,18:28:81.23:4374,81,0	1/1:14,16:31:87.30:4900,87,0	1/1:6,4:10:30.10:1417,30,0	1/1:6,3:10:18.06:1087,18,0	1/1:16,5:24:72.20:3081,72,0	1/1:9,13:28:69.11:2863,69,0	1/1:9,3:17:24.08:1253,24,0	0/0:23,0:23:63.22:0,63,2373	0/0:17,0:17:48.16:0,48,1575	0/0:35,0:35:99:0,102,3519	1/1:8,15:24:66.23:3818,66,0	1/1:15,16:33:99:5441,99,0	1/1:11,18:34:90.31:4924,90,0	1/1:0,4:5:12.04:743,12,0
chr10	42492067	.	T	TG	5822.65	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-15.490;DP=736;FS=5.135;HRun=5;HaplotypeScore=74.0265;InbreedingCoeff=0.9990;MQ=94.24;MQ0=0;MQRankSum=-3.585;QD=34.66;ReadPosRankSum=-0.556;VQSLOD=4.7223;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,126,1354	0/0:9,0:9:27.07:0,27,290	0/0:39,0:39:89.90:0,90,948	0/0:26,0:26:63.58:0,64,638	0/0:24,0:24:66.16:0,66,709	0/0:37,0:36:99:0,111,1193	0/0:14,0:14:42.11:0,42,451	1/1:2,27:29:84.26:1088,84,0	0/0:29,0:29:81.17:0,81,854	0/0:29,0:29:87.22:0,87,935	0/0:19,0:19:54.11:0,54,564	0/0:28,0:28:75.19:0,75,806	0/0:16,0:16:42.10:0,42,450	0/0:28,0:28:75.19:0,75,806	0/0:31,0:31:81.20:0,81,870	0/0:33,0:33:93.22:0,93,992	0/0:21,0:21:57.12:0,57,604	0/0:18,0:18:54.14:0,54,580	1/1:2,18:20:57.11:711,57,0	1/1:1,25:26:66.21:868,66,0	1/1:3,33:36:89.05:1253,89,0	0/0:37,0:37:99:0,102,1096	0/0:38,0:38:99:0,108,1160	0/0:26,0:26:75.19:0,75,806	0/0:22,0:22:48.11:0,48,516	1/1:2,24:26:39.98:876,40,0	1/1:2,20:22:57.19:750,57,0	1/1:2,7:9:21.07:276,21,0
chr10	42492440	.	A	AC	380.64	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=1.530;DP=656;FS=0.000;HRun=2;HaplotypeScore=64.1722;InbreedingCoeff=0.9917;MQ=82.22;MQ0=0;MQRankSum=-1.597;QD=29.28;ReadPosRankSum=0.671;VQSLOD=3.0940;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,117,1449	0/0:13,0:13:39.12:0,39,473	0/0:31,0:31:77.20:0,77,926	0/0:26,0:24:69.21:0,69,836	0/0:21,0:21:57.18:0,57,701	0/0:24,0:24:66.21:0,66,818	0/0:25,0:25:75.24:0,75,930	0/0:35,0:35:96.29:0,96,1169	0/0:23,0:23:69.20:0,69,843	0/0:19,0:19:48.14:0,48,586	0/0:14,0:14:42.13:0,42,518	0/0:37,0:37:99:0,111,1363	0/0:26,0:26:78.25:0,78,967	0/0:26,0:26:72.20:0,72,866	0/0:28,0:28:84.26:0,84,1041	1/1:1,12:13:33.11:475,33,0	0/0:15,0:15:45.14:0,45,558	0/0:17,0:17:48.15:0,48,595	0/0:22,0:22:57.16:0,57,684	0/0:25,0:25:72.23:0,72,889	0/0:23,0:23:69.22:0,69,855	0/0:22,0:22:60.19:0,60,740	0/0:24,0:24:66.19:0,66,805	0/0:23,0:23:69.17:0,69,838	0/0:21,0:21:60.17:0,60,730	0/0:24,0:24:69.22:0,69,855	0/0:33,0:32:96.28:0,96,1176	0/0:6,0:6:18.06:0,18,223
chr10	42492666	.	CT	C	173.76	PASS	AB=0.919;AC=15;AF=0.268;AN=56;BaseQRankSum=4.033;DP=612;FS=1.596;HRun=16;HaplotypeScore=191.0211;InbreedingCoeff=-0.0336;MQ=57.41;MQ0=14;MQRankSum=-5.118;QD=0.62;ReadPosRankSum=-3.637;VQSLOD=-0.0301;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:16,0:21:5.07:5,0,19	0/0:9,0:9:22.39:0,22,113	0/0:41,0:13:0.07:0,0,30	0/1:45,0:14:3.63:12,0,4	0/0:35,0:36:38.84:0,39,217	0/1:17,1:17:38.88:39,0,77	0/1:15,1:15:14.59:15,0,54	0/0:35,0:34:25.05:0,25,150	0/1:16,1:17:18.38:18,0,112	0/0:32,1:33:22.82:0,23,184	0/0:18,0:20:44.65:0,45,217	0/0:18,0:19:39.17:0,39,283	0/0:11,1:13:10.94:0,11,192	0/1:10,1:10:32.46:32,0,87	0/0:9,1:10:7.57:0,8,99	1/1:5,4:9:17.95:107,18,0	1/1:14,0:19:2.33:37,2,0	0/1:16,3:19:15.99:16,0,134	0/1:24,0:23:15.65:16,0,36	0/1:24,4:29:12.07:12,0,169	0/0:9,0:8:8.04:0,8,33	0/1:13,2:14:6.07:6,0,162	0/0:21,0:21:44.94:0,45,374	0/0:20,0:21:52.35:0,52,394	0/0:23,1:24:28.72:0,29,176	0/1:31,2:30:12.49:12,0,121	0/0:33,1:34:46.12:0,46,203	0/0:4,0:4:3.15:0,3,12
chr10	42492668	.	T	TTC	2355.11	PASS	AB=0.984;AC=19;AF=0.339;AN=56;BaseQRankSum=0.886;DP=631;FS=4.327;HRun=0;HaplotypeScore=203.0267;InbreedingCoeff=-0.1793;MQ=57.42;MQ0=16;MQRankSum=-1.847;QD=6.18;ReadPosRankSum=-1.155;VQSLOD=3.2106;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:18:39.76:0,40,330	0/0:8,0:8:19.70:0,20,129	0/0:46,0:13:25.86:0,26,210	0/0:50,0:15:15.01:0,15,127	0/1:29,8:36:76.28:458,0,76	0/1:18,0:17:33.86:73,0,34	0/1:17,0:16:9.41:83,0,9	0/1:37,0:36:15.65:260,0,16	0/1:17,0:17:32.31:32,0,76	1/1:33,0:33:6.36:188,6,0	0/1:20,0:20:22.72:23,0,41	0/0:19,0:19:48.79:0,49,554	0/0:16,0:16:42.01:0,42,485	0/0:11,0:10:27.54:0,28,322	0/1:10,0:10:15.69:16,0,35	0/1:10,0:10:39.35:54,0,39	0/0:22,0:19:3.50:0,3,212	0/1:19,0:19:84.52:106,0,85	0/1:24,0:23:22.06:198,0,22	0/1:28,2:30:99:227,0,127	1/1:9,1:9:14.44:89,14,0	0/0:17,0:16:42.05:0,42,462	0/0:20,0:20:57.07:0,57,739	0/0:21,0:21:39.19:0,39,682	0/1:25,0:25:4.36:189,0,4	0/1:36,0:32:99:167,0,100	0/1:34,0:33:27.45:311,0,27	0/1:4,0:4:9.11:50,0,9
chr10	42492669	.	T	TC	3595.02	PASS	AB=0.858;AC=20;AF=0.357;AN=56;BaseQRankSum=-3.297;DP=635;FS=4.016;HRun=0;HaplotypeScore=192.9735;InbreedingCoeff=0.0174;MQ=57.08;MQ0=18;MQRankSum=4.409;QD=9.88;ReadPosRankSum=2.233;VQSLOD=3.7628;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:17:37.62:0,38,277	0/0:8,0:8:8.93:0,9,44	0/0:48,0:13:26.02:0,26,203	0/0:52,0:15:21.34:0,21,172	0/1:35,0:36:31.62:200,0,32	0/1:18,1:17:54.70:55,0,81	0/1:16,0:15:22.61:52,0,23	0/1:25,10:34:39.52:440,0,40	0/0:17,0:17:15.04:0,15,160	1/1:32,1:33:55.66:337,56,0	1/1:19,1:20:1.53:78,2,0	0/0:19,0:19:44.27:0,44,529	0/0:16,0:16:43.31:0,43,474	0/0:12,0:11:29.65:0,30,318	0/1:10,0:10:8.97:37,0,9	0/1:10,0:10:50.21:65,0,50	0/0:22,0:19:47.16:0,47,322	0/1:18,0:18:33.54:125,0,34	0/1:12,13:24:65.97:334,0,66	0/1:21,9:30:99:373,0,184	1/1:4,5:8:12.63:145,13,0	0/0:17,0:16:44.42:0,44,449	0/0:20,0:20:60.10:0,60,710	0/0:22,0:22:56.99:0,57,628	1/1:24,1:25:10.94:235,11,0	0/1:22,16:34:99:435,0,218	0/1:19,16:34:83.51:615,0,84	0/1:3,1:4:18.78:70,0,19
chr10	42492670	.	T	TC	302.37	PASS	AB=0.732;AC=2;AF=0.036;AN=56;BaseQRankSum=5.452;DP=638;FS=4.701;HRun=0;HaplotypeScore=205.2280;InbreedingCoeff=-0.0512;MQ=56.79;MQ0=18;MQRankSum=-5.963;QD=6.57;ReadPosRankSum=-0.473;VQSLOD=2.8403;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:17:22.97:0,23,268	0/1:5,4:9:32.27:117,0,32	0/0:48,0:12:19.59:0,20,163	0/0:53,0:15:4.12:0,4,68	0/1:26,11:36:99:274,0,225	0/0:19,0:17:22.42:0,22,166	0/0:17,0:16:7.91:0,8,132	0/0:37,0:35:57.18:0,57,298	0/0:17,0:17:6.06:0,6,211	0/0:33,0:33:56.87:0,57,322	0/0:20,0:20:52.44:0,52,250	0/0:20,0:20:44.44:0,44,531	0/0:16,0:16:46.24:0,46,498	0/0:12,0:11:29.66:0,30,319	0/0:10,0:10:27.85:0,28,147	0/0:10,0:10:29.07:0,29,196	0/0:20,0:17:46.76:0,47,337	0/0:18,0:18:42.11:0,42,278	0/0:25,0:24:27.23:0,27,179	0/0:30,0:30:45.27:0,45,288	0/0:10,0:9:14.57:0,15,64	0/0:17,0:16:47.39:0,47,471	0/0:20,0:20:60.10:0,60,714	0/0:22,0:22:59.08:0,59,657	0/0:23,0:23:34.01:0,34,248	0/0:38,0:34:48.88:0,49,259	0/0:35,0:34:57.20:0,57,272	0/0:4,0:4:11.02:0,11,50
chr10	42492695	.	TTG	T	1452.85	PASS	AB=0.942;AC=19;AF=0.339;AN=56;BaseQRankSum=13.734;DP=624;FS=0.741;HRun=0;HaplotypeScore=209.8672;InbreedingCoeff=0.1085;MQ=50.88;MQ0=18;MQRankSum=-12.782;QD=4.58;ReadPosRankSum=1.453;VQSLOD=2.9579;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:14:17.17:55,17,0	1/1:11,0:11:1.53:37,2,0	0/0:48,0:15:22.43:0,22,562	0/0:56,0:14:15.36:0,15,181	0/1:39,0:38:47.05:116,0,47	1/1:8,9:15:34.24:411,34,0	0/1:12,6:18:25.92:343,0,26	0/1:32,1:31:49.07:49,0,164	0/1:8,8:15:78.61:285,0,79	0/0:30,0:30:84.29:0,84,1533	0/0:20,0:20:54.18:0,54,988	0/0:17,0:17:46.01:0,46,686	0/0:19,0:19:57.17:0,57,966	0/0:14,0:13:39.05:0,39,687	0/0:13,0:13:39.13:0,39,696	0/1:12,0:10:24.36:25,0,24	0/1:20,0:17:4.39:49,0,4	0/0:15,0:15:45.13:0,45,787	0/1:26,0:23:23.47:23,0,208	0/1:28,0:27:3.89:42,0,4	0/1:10,0:9:30.46:30,0,31	0/0:16,0:16:45.15:0,45,802	0/0:19,0:19:56.77:0,57,968	0/0:20,0:20:60.12:0,60,1039	0/0:20,0:20:60.19:0,60,1069	0/1:39,1:35:76.20:93,0,76	0/1:29,0:28:50.12:50,0,50	1/1:3,0:3:4.46:17,4,0
chr10	42492696	.	TG	T	7609.01	PASS	AB=0.689;AC=26;AF=0.464;AN=56;BaseQRankSum=15.483;DP=615;FS=6.382;HRun=1;HaplotypeScore=176.5583;InbreedingCoeff=0.6989;MQ=51.15;MQ0=18;MQRankSum=-15.023;QD=24.87;ReadPosRankSum=1.781;VQSLOD=4.5133;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,11:13:36.11:470,36,0	1/1:1,10:11:16.10:374,16,0	0/0:49,0:15:37.04:0,37,487	0/0:53,0:13:17.29:0,17,154	1/1:5,34:38:68.85:1185,69,0	1/1:12,5:15:41.65:384,42,0	1/1:11,7:18:15.63:351,16,0	0/1:15,14:27:68.71:589,0,69	0/1:13,3:15:17.28:219,0,17	0/0:30,0:30:84.27:0,84,1232	0/0:21,0:21:60.17:0,60,852	0/0:17,0:17:46.42:0,46,499	0/0:19,0:19:56.07:0,56,749	0/0:15,0:14:24.82:0,25,546	0/0:13,0:13:39.12:0,39,558	0/1:3,9:10:12.85:276,0,13	1/1:8,10:15:37.53:411,38,0	0/0:15,0:15:45.09:0,45,620	0/1:13,13:22:99:384,0,119	1/1:4,24:27:59.53:949,60,0	1/1:5,3:8:11.46:99,11,0	0/0:15,0:15:45.03:0,45,620	0/0:19,1:20:41.24:0,41,771	0/0:20,0:20:60.11:0,60,831	0/0:21,0:21:63.17:0,63,877	1/1:10,30:35:33.14:1061,33,0	1/1:6,22:27:49.89:779,50,0	1/1:2,1:3:8.75:78,9,0
chr10	42492703	.	TTGG	T	3189.83	PASS	AB=0.966;AC=21;AF=0.375;AN=56;BaseQRankSum=11.762;DP=622;FS=5.540;HRun=0;HaplotypeScore=211.4119;InbreedingCoeff=0.2300;MQ=49.78;MQ0=14;MQRankSum=-12.911;QD=9.97;ReadPosRankSum=-1.062;VQSLOD=2.4921;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,10:17:36.11:513,36,0	0/1:12,1:12:32.63:84,0,33	0/0:40,0:16:38.29:0,38,649	0/0:46,0:13:19.24:0,19,268	1/1:38,2:40:17.66:562,18,0	1/1:15,3:16:39.69:352,40,0	0/1:20,1:20:44.29:226,0,44	0/1:29,1:28:99:240,0,291	0/1:14,2:15:68.66:114,0,69	0/0:29,0:29:84.28:0,84,1769	0/0:22,0:22:63.17:0,63,1290	0/0:16,0:16:35.72:0,36,857	0/0:21,0:21:63.21:0,63,1285	0/0:16,0:15:45.15:0,45,898	0/0:12,0:12:36.12:0,36,735	0/1:13,0:10:20.35:38,0,20	1/1:11,9:18:38.46:505,38,0	0/0:15,0:15:45.15:0,45,941	0/1:25,0:20:52.71:53,0,428	0/1:30,0:29:57.37:162,0,57	0/1:8,0:7:28.57:36,0,29	0/0:17,0:17:48.16:0,48,1007	0/0:20,0:20:60.21:0,60,1260	0/0:22,0:22:63.21:0,63,1295	0/0:23,0:23:69.24:0,69,1462	0/1:36,2:33:99:283,0,105	1/1:28,1:27:0.86:195,1,0	1/1:2,0:2:0.79:14,1,0
chr10	42492706	.	G	GTTTTTTTGTT	3533.30	PASS	AB=0.973;AC=20;AF=0.357;AN=56;BaseQRankSum=8.858;DP=612;FS=13.057;HRun=0;HaplotypeScore=291.3602;InbreedingCoeff=0.0028;MQ=49.55;MQ0=11;MQRankSum=-10.907;QD=9.76;ReadPosRankSum=-3.931;VQSLOD=-0.1160;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:13,6:21:23.17:298,0,23	0/1:13,0:12:38.19:38,0,131	0/0:35,0:15:16.98:0,17,445	0/1:42,0:14:21.33:21,0,125	0/1:38,0:39:50.55:335,0,51	0/1:16,0:15:47.05:102,0,47	1/1:19,0:18:21.26:390,21,0	1/1:28,0:26:1.44:445,1,0	0/1:16,0:15:49.23:49,0,111	0/0:29,0:29:59.86:0,60,1435	0/0:22,0:22:45.08:0,45,1143	0/0:17,0:17:31.92:0,32,808	0/0:22,0:22:60.12:0,60,1308	0/0:17,0:16:36.97:0,37,809	0/0:11,0:11:24.08:0,24,685	0/1:13,0:10:29.27:59,0,29	1/1:19,0:17:15.47:548,15,0	0/0:15,0:15:31.64:0,32,742	0/1:23,0:18:52.95:131,0,53	0/1:28,0:27:99:274,0,189	1/1:9,0:8:0.12:49,0,0	0/0:16,0:16:48.15:0,48,1189	0/0:20,0:20:54.15:0,54,1355	0/0:22,0:22:57.15:0,57,1452	0/0:23,0:23:65.58:0,66,1533	0/1:38,0:33:99:198,0,202	0/1:30,0:28:4.59:524,0,5	0/1:6,0:6:12.13:70,0,12
chr10	42492708	.	T	TTTC	1107.70	PASS	AB=0.982;AC=17;AF=0.304;AN=56;BaseQRankSum=13.110;DP=617;FS=35.752;HRun=0;HaplotypeScore=226.5547;InbreedingCoeff=-0.0800;MQ=49.79;MQ0=11;MQRankSum=-11.925;QD=3.25;ReadPosRankSum=2.201;VQSLOD=1.5630;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:22:4.38:4,0,167	0/1:13,0:12:6.50:76,0,6	0/1:33,0:14:5.68:6,0,426	0/0:38,0:13:15.51:0,16,245	0/1:40,0:40:69.95:70,0,98	1/1:17,0:16:0.66:83,1,0	0/1:21,0:20:69.73:86,0,70	0/1:30,0:28:6.69:7,0,312	0/1:17,0:16:36.99:37,0,128	0/0:31,0:31:87.24:0,87,1335	0/0:21,0:21:60.17:0,60,935	0/0:17,0:17:49.97:0,50,771	0/0:21,0:21:63.20:0,63,1044	0/0:17,0:16:45.12:0,45,717	0/0:12,0:12:33.09:0,33,511	0/1:13,0:10:21.97:22,0,66	0/0:20,0:18:26.71:0,27,231	0/0:15,0:15:45.08:0,45,678	0/1:23,0:18:1.65:2,0,378	0/1:27,2:28:61.11:265,0,61	0/1:9,0:8:19.29:23,0,19	0/0:16,0:16:48.16:0,48,818	0/0:20,0:20:60.16:0,60,985	0/0:24,0:24:63.16:0,63,1010	0/0:23,0:23:66.23:0,66,1121	0/1:35,2:32:69.68:213,0,70	0/1:27,4:29:4.89:320,0,5	1/1:6,0:6:5.34:48,5,0
chr10	42492709	.	T	TTG	7054.37	PASS	AB=0.642;AC=19;AF=0.339;AN=56;BaseQRankSum=10.386;DP=619;FS=1.966;HRun=0;HaplotypeScore=195.5472;InbreedingCoeff=0.0772;MQ=51.00;MQ0=10;MQRankSum=-12.214;QD=21.06;ReadPosRankSum=1.892;VQSLOD=5.2189;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:20,1:22:41.01:319,41,0	0/1:4,9:12:15.55:447,0,16	0/0:32,0:15:8:0,8,409	0/0:37,0:13:6.25:0,6,209	0/1:17,18:40:26.11:1018,0,26	1/1:8,9:16:27.61:521,28,0	0/1:7,11:20:86.29:486,0,86	0/1:17,13:30:99:590,0,176	0/1:10,8:17:74.12:302,0,74	0/0:31,0:31:87.27:0,87,1243	0/0:21,0:21:60.17:0,60,841	0/0:17,0:17:45.42:0,45,688	0/0:21,0:21:63.20:0,63,933	0/0:16,0:15:45.12:0,45,649	0/0:11,0:11:33.09:0,33,466	0/1:4,9:10:32.04:296,0,32	1/1:16,0:18:2.64:182,3,0	0/0:15,0:15:45.08:0,45,616	0/1:17,8:20:99:277,0,310	0/1:13,15:28:60.43:746,0,60	0/1:2,7:8:49.39:200,0,49	0/0:16,0:16:48.16:0,48,734	0/0:20,0:20:60.16:0,60,889	0/0:24,0:24:66.13:0,66,936	0/0:23,0:23:66.22:0,66,1007	0/1:19,20:34:9.70:911,0,10	0/1:14,16:29:22.72:610,0,23	1/1:5,1:6:12.76:150,13,0
chr10	42493765	.	TTCTCTCTCTCTC	T	496.34	PASS	AB=0.857;AC=10;AF=0.263;AN=38;BaseQRankSum=2.118;DP=537;FS=6.039;HRun=0;HaplotypeScore=174.6817;InbreedingCoeff=0.3664;MQ=73.84;MQ0=6;MQRankSum=-0.391;QD=5.01;ReadPosRankSum=1.406;VQSLOD=2.4587;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:12,5:16:2.61:90,3,0	./.	./.	0/0:36,0:23:0.89:0,1,2	./.	1/1:21,2:23:6.02:165,6,0	1/1:11,0:11:0.47:1,0,0	./.	1/1:11,3:13:12.04:293,12,0	0/0:27,0:26:12.93:0,13,379	./.	0/0:15,0:15:3.76:0,4,60	0/0:22,0:22:6.91:0,7,163	0/0:17,0:17:15.52:0,16,538	0/0:20,0:20:3.01:0,3,72	./.	0/1:12,0:19:26.96:27,0,49	0/1:14,0:14:37.86:38,0,63	0/0:25,0:24:15.77:0,16,413	0/0:25,0:25:0.75:0,1,3	0/0:12,0:12:3.01:0,3,47	./.	./.	0/0:20,0:20:9.03:0,9,238	0/0:19,0:19:9:0,9,157	0/0:18,0:17:15.03:0,15,437	0/0:23,0:22:23.20:0,23,511	./.
chr10	42493819	.	CTGTGTGTGTGTCTGTGTG	C	1320.50	PASS	AB=1.000;AC=27;AF=0.643;AN=42;BaseQRankSum=3.922;DP=328;FS=6.165;HRun=0;HaplotypeScore=119.8251;InbreedingCoeff=0.5174;MQ=36.93;MQ0=44;MQRankSum=-3.543;QD=7.10;ReadPosRankSum=-0.355;VQSLOD=1.8479;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:20:8.30:23,8,0	1/1:2,0:4:3.01:127,3,0	./.	./.	./.	1/1:9,0:18:5.38:134,5,0	1/1:6,0:4:6.05:27,6,0	0/0:14,0:12:8.43:0,8,39	1/1:6,0:12:6.75:101,7,0	1/1:6,7:11:11.56:303,12,0	./.	0/1:18,0:16:4.35:4,0,469	0/0:10,0:10:17.55:0,18,755	0/0:17,0:16:9.01:0,9,363	./.	1/1:2,0:5:4.26:128,4,0	1/1:18,0:16:22.52:142,23,0	1/1:11,2:12:22.55:433,23,0	0/0:13,0:10:4.16:0,4,104	1/1:6,0:6:4.07:12,4,0	0/1:6,0:3:0.59:1,0,3	0/0:12,0:12:8.37:0,8,496	0/0:15,0:12:18.06:0,18,1052	0/1:19,0:18:3.89:4,0,898	./.	1/1:8,0:7:1.68:11,2,0	1/1:8,0:5:2.94:18,3,0	./.
chr10	42494341	.	TA	T	6321.80	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=14.867;DP=719;FS=4.378;HRun=9;HaplotypeScore=85.0903;InbreedingCoeff=0.9906;MQ=75.29;MQ0=0;MQRankSum=-1.320;QD=23.33;ReadPosRankSum=0.350;VQSLOD=5.5015;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:90.23:0,90,1009	1/1:2,14:16:36.01:329,36,0	0/0:14,1:15:8.58:0,9,319	0/0:14,0:14:27.53:0,28,342	0/0:31,0:31:87.23:0,87,991	1/1:4,28:32:81.03:741,81,0	1/1:4,19:23:54.02:494,54,0	1/1:2,19:21:57:512,57,0	1/1:2,17:19:51.03:466,51,0	0/0:46,0:46:99:0,126,1454	0/0:25,0:25:72.18:0,72,808	0/0:33,0:33:90.25:0,90,1027	0/0:36,0:36:93.27:0,93,1065	0/0:26,0:26:75.21:0,75,856	0/0:41,0:41:99:0,117,1329	1/1:2,14:16:39.02:357,39,0	0/0:18,0:18:48.14:0,48,554	0/0:17,0:17:48.12:0,48,541	1/1:1,17:18:51.01:462,51,0	1/1:4,36:40:96.03:879,96,0	1/1:1,10:11:24.01:220,24,0	0/0:34,0:34:84.25:0,84,969	0/0:38,0:39:99:0,108,1218	0/0:12,0:12:36.11:0,36,415	0/0:28,0:28:78.22:0,78,893	1/1:1,28:29:84.03:763,84,0	1/1:3,32:34:90.04:824,90,0	1/1:0,11:11:30.02:275,30,0
chr10	42495629	.	TTTGA	T	13185.92	PASS	AB=0.542;AC=24;AF=0.429;AN=56;BaseQRankSum=17.017;DP=708;FS=2.869;HRun=0;HaplotypeScore=119.9942;InbreedingCoeff=0.8466;MQ=87.89;MQ0=0;MQRankSum=-5.330;QD=45.94;ReadPosRankSum=1.697;VQSLOD=5.7031;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,111,2791	1/1:0,14:14:35.65:671,36,0	0/0:37,0:36:99:0,102,2413	0/0:30,0:30:68.50:0,68,1611	1/1:1,18:19:42.14:760,42,0	1/1:0,16:16:45.15:832,45,0	1/1:0,26:26:69.24:1267,69,0	1/1:2,36:38:99:1895,108,0	1/1:2,27:29:69.24:1264,69,0	0/0:46,0:46:99:0,135,3427	0/0:21,0:21:60.21:0,60,1571	0/0:21,0:21:60.21:0,60,1556	0/0:18,0:18:48.16:0,48,1280	0/0:31,0:31:84.29:0,84,2240	0/0:34,0:34:99:0,99,2583	0/1:2,22:24:19.84:1003,0,20	0/0:19,0:19:54.17:0,54,1384	0/0:17,0:17:51.12:0,51,1242	1/1:0,19:19:57.14:968,57,0	1/1:0,27:27:72.20:1241,72,0	1/1:1,25:26:66.22:1185,66,0	0/0:41,0:41:99:0,117,2884	0/0:16,0:16:48.13:0,48,1168	0/0:26,0:26:66.23:0,66,1754	0/0:26,0:26:75.24:0,75,1886	0/1:4,14:18:99:703,0,112	1/1:1,25:26:66.23:1229,66,0	1/1:0,5:5:9.03:168,9,0
chr10	42496357	.	GTTTC	G	978.09	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.792;DP=810;FS=1.844;HRun=0;HaplotypeScore=151.8023;InbreedingCoeff=0.9960;MQ=74.69;MQ0=0;MQRankSum=-3.538;QD=37.62;ReadPosRankSum=-0.107;VQSLOD=3.3886;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,141,3491	0/0:7,0:7:21.07:0,21,567	0/0:23,0:22:50.33:0,50,1199	0/0:18,0:18:50.74:0,51,1014	1/1:1,25:26:57.20:1073,57,0	0/0:27,0:27:72.20:0,72,1764	0/0:26,0:26:77.62:0,78,1944	0/0:39,0:39:99:0,114,2700	0/0:35,0:35:99:0,105,2644	0/0:54,0:54:99:0,160,3961	0/0:24,0:24:72.23:0,72,1755	0/0:21,0:21:63.19:0,63,1518	0/0:33,0:33:96.20:0,96,2398	0/0:32,0:32:96.28:0,96,2387	0/0:44,0:44:99:0,126,3287	0/0:27,0:27:75.13:0,75,1822	0/0:19,0:19:51.16:0,51,1250	0/0:20,0:20:60.17:0,60,1504	0/0:22,0:22:60.68:0,61,1492	0/0:40,0:40:99:0,120,2982	0/0:37,0:37:99:0,105,2712	0/0:28,0:28:78.25:0,78,1942	0/0:16,0:16:48.16:0,48,1224	0/0:27,0:27:78.20:0,78,1877	0/0:23,0:22:69.22:0,69,1739	0/0:40,0:40:99:0,108,2767	0/0:29,0:29:87.25:0,87,2174	0/0:19,0:19:51.15:0,51,1286
chr10	42496559	.	C	CCTTGCTTG	21067.56	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-4.122;DP=728;FS=1.414;HRun=0;HaplotypeScore=168.4547;InbreedingCoeff=0.9901;MQ=68.69;MQ0=1;MQRankSum=-14.453;QD=54.02;ReadPosRankSum=0.396;VQSLOD=4.8590;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,0:46:80.92:689,81,0	1/1:3,7:10:21.07:800,21,0	0/0:18,0:19:42.13:0,42,976	0/0:18,0:18:39.12:0,39,920	1/1:15,22:42:57.19:2059,57,0	1/1:7,17:27:42.14:1763,42,0	1/1:6,11:25:30.10:1269,30,0	1/1:14,8:28:42.12:1255,42,0	1/1:3,15:21:42.14:1778,42,0	0/0:36,0:36:93.14:0,93,2070	0/0:26,0:26:69.22:0,69,1753	0/0:29,0:29:81.28:0,81,2144	0/0:34,0:34:99:0,102,2670	0/0:27,0:27:75.26:0,75,1908	0/0:31,0:31:87.27:0,87,2073	1/1:5,13:23:39.13:1652,39,0	1/1:8,0:26:53.94:452,54,0	0/0:23,0:23:63.19:0,63,1528	1/1:7,5:16:27.08:796,27,0	1/1:12,27:43:81.24:3116,81,0	1/1:8,2:11:9.03:290,9,0	0/0:22,0:22:54.17:0,54,1346	0/0:23,0:23:54.17:0,54,1293	0/0:18,0:18:48.16:0,48,1239	0/0:32,0:32:93.27:0,93,2188	1/1:8,19:31:69.23:2615,69,0	1/1:7,18:30:45.15:1883,45,0	1/1:7,3:10:18.06:651,18,0
chr10	42496651	.	T	TATTC	13315.97	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-2.348;DP=656;FS=19.177;HRun=0;HaplotypeScore=108.6766;InbreedingCoeff=0.9741;MQ=67.25;MQ0=7;MQRankSum=-2.164;QD=37.94;ReadPosRankSum=-1.949;VQSLOD=3.2202;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:16,22:36:84.27:1859,84,0	1/1:5,4:9:12.04:291,12,0	0/0:21,0:17:14.93:0,15,188	0/0:14,0:13:5.97:0,6,52	1/1:10,2:28:50.02:493,50,0	1/1:11,0:16:38.96:487,39,0	1/1:4,0:17:23.98:350,24,0	1/1:14,14:30:51.15:864,51,0	1/1:2,0:13:15.04:235,15,0	0/0:39,0:39:84.26:0,84,1325	0/0:28,0:28:66.21:0,66,1029	0/0:17,0:17:39.13:0,39,637	0/0:31,0:31:66.18:0,66,997	0/0:25,0:25:63.22:0,63,1028	0/0:26,0:26:54.17:0,54,854	1/1:24,0:24:35.94:439,36,0	1/1:13,20:32:87.30:2018,87,0	0/0:20,0:20:48.16:0,48,762	1/1:12,2:14:27.07:483,27,0	1/1:21,26:46:99:2557,114,0	1/1:3,13:16:30.10:731,30,0	0/0:23,0:23:51.14:0,51,798	0/0:15,0:15:36.11:0,36,565	0/0:16,0:16:36.11:0,36,565	0/0:30,0:29:51.16:0,51,809	1/1:15,10:23:48.16:1048,48,0	1/1:16,10:26:51.16:1094,51,0	1/1:4,7:11:15.05:366,15,0
chr10	42497562	.	ATCT	A	14103.36	PASS	AC=28;AF=0.519;AN=54;BaseQRankSum=20.446;DP=710;FS=0.918;HRun=0;HaplotypeScore=151.8794;InbreedingCoeff=0.9775;MQ=84.84;MQ0=0;MQRankSum=-13.016;QD=39.84;ReadPosRankSum=1.297;VQSLOD=5.4949;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,22:23:57.19:948,57,0	1/1:0,8:8:18.06:300,18,0	0/0:26,0:26:72.25:0,72,1529	0/0:27,1:27:65.30:0,65,1534	1/1:1,31:32:75.09:1245,75,0	1/1:2,25:27:72.25:1197,72,0	1/1:2,18:20:39.13:648,39,0	1/1:2,32:34:96.26:1492,96,0	1/1:1,23:24:54.18:898,54,0	0/0:31,0:31:81.28:0,81,1821	0/0:23,0:23:54.19:0,54,1220	0/0:29,0:29:84.28:0,84,1857	0/0:30,0:30:90.30:0,90,1942	0/0:37,0:37:99:0,108,2410	0/0:34,0:34:99:0,99,2184	1/1:2,19:21:42.14:698,42,0	1/1:0,17:17:45.15:749,45,0	0/0:17,0:17:48.16:0,48,1063	1/1:2,24:26:69.21:1116,69,0	1/1:2,33:35:75.26:1248,75,0	1/1:1,20:21:45.15:749,45,0	0/0:21,0:21:60.21:0,60,1339	0/0:26,0:26:75.26:0,75,1683	0/0:30,0:30:84.29:0,84,1898	0/0:23,0:23:66.23:0,66,1492	1/1:2,23:25:3.94:1019,4,0	1/1:1,40:41:99:1797,108,0	./.
chr10	42498117	.	A	ATGC	854.62	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=1.857;DP=431;FS=22.108;HRun=0;HaplotypeScore=80.6906;InbreedingCoeff=0.4147;MQ=89.35;MQ0=1;MQRankSum=-1.294;QD=8.55;ReadPosRankSum=1.121;VQSLOD=1.0809;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:32,0:32:29.49:520,29,0	0/1:6,0:6:4.93:58,0,5	0/0:27,0:23:22.91:0,23,257	0/0:41,0:36:26.97:0,27,303	0/1:18,0:18:13.90:14,0,19	0/0:19,0:19:2.90:0,3,16	0/0:18,0:18:0:0,0,0	0/0:22,0:22:3.93:0,4,134	0/0:9,0:9:1.80:0,2,13	0/0:6,0:6:12.03:0,12,155	0/0:7,0:7:8.97:0,9,71	0/0:13,0:13:26.99:0,27,324	0/0:7,0:7:12.03:0,12,154	0/0:22,0:22:45.09:0,45,566	0/0:8,0:8:15.03:0,15,195	1/1:14,0:14:2.94:18,3,0	1/1:3,20:23:18.06:364,18,0	0/0:10,0:10:11.21:0,11,170	0/0:12,0:12:5.59:0,6,43	0/0:14,0:15:2.99:0,3,24	0/0:23,0:23:11.89:0,12,84	0/0:5,0:5:12.04:0,12,171	0/0:9,0:9:12.04:0,12,171	0/0:16,0:16:42.14:0,42,598	0/0:9,0:9:12.04:0,12,171	0/0:15,0:15:30.44:0,30,248	0/0:17,0:17:40.82:0,41,433	0/1:7,0:7:24.02:24,0,104
chr10	42498143	.	GGTGATA	G	1995.78	PASS	AB=0.938;AC=30;AF=0.536;AN=56;BaseQRankSum=8.557;DP=327;FS=39.909;HRun=0;HaplotypeScore=62.9617;InbreedingCoeff=0.6200;MQ=46.37;MQ0=21;MQRankSum=-7.502;QD=10.73;ReadPosRankSum=-0.829;VQSLOD=0.0255;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:19,0:19:7.08:16,0,7	1/1:5,0:5:12.02:144,12,0	0/0:26,0:7:0.04:0,0,143	0/0:29,0:10:17.80:0,18,510	1/1:2,7:9:3.01:37,3,0	1/1:1,10:11:3.01:43,3,0	1/1:1,12:13:3.01:52,3,0	1/1:5,11:16:34.31:478,34,0	1/1:0,6:6:6.02:112,6,0	0/0:6,0:6:15.04:0,15,336	0/0:5,0:4:5.82:0,6,194	0/0:10,0:10:24.08:0,24,719	0/0:7,0:7:21.07:0,21,528	0/0:16,0:15:42.14:0,42,1187	0/0:5,0:4:12.04:0,12,321	1/1:1,11:11:2.59:53,3,0	1/1:21,0:21:3.14:10,3,0	0/1:6,0:7:18.19:18,0,312	1/1:3,4:7:14.14:156,14,0	1/1:1,10:11:2.97:20,3,0	1/1:6,9:13:0.89:2,1,0	0/0:5,0:5:15.05:0,15,416	0/0:7,0:7:21.07:0,21,528	0/0:18,0:18:54.19:0,54,1486	0/0:7,0:6:18.06:0,18,504	1/1:12,0:12:24.04:279,24,0	1/1:15,0:15:42.89:511,43,0	1/1:6,1:7:20.07:255,20,0
chr10	42498146	.	GATA	G	1020.65	PASS	AB=0.792;AC=28;AF=0.519;AN=54;BaseQRankSum=8.960;DP=301;FS=46.863;HRun=0;HaplotypeScore=49.1361;InbreedingCoeff=0.6285;MQ=45.45;MQ0=23;MQRankSum=-6.451;QD=6.71;ReadPosRankSum=-0.895;VQSLOD=0.5985;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:4,10:14:3.41:112,0,3	1/1:5,0:5:10.56:91,11,0	0/0:25,0:5:0.04:0,0,144	0/0:27,0:9:4.29:0,4,427	1/1:7,0:7:3.01:37,3,0	1/1:10,0:10:2.84:14,3,0	1/1:12,0:12:2.94:18,3,0	1/1:12,0:12:32.66:270,33,0	1/1:6,0:6:5.93:41,6,0	0/0:5,0:5:15.04:0,15,268	0/0:4,0:3:6.02:0,6,146	0/0:11,0:10:24.08:0,24,584	0/0:8,0:7:21.07:0,21,458	0/0:16,0:15:45.13:0,45,991	0/0:5,0:4:12.04:0,12,272	1/1:12,0:11:2.96:35,3,0	1/1:20,0:20:18.07:211,18,0	0/1:7,0:7:62.02:62,0,254	1/1:6,0:6:12.98:87,13,0	1/1:10,1:11:2.97:20,3,0	./.	0/0:5,0:5:15.05:0,15,340	0/0:7,0:7:21.07:0,21,438	0/0:18,0:18:54.18:0,54,1229	0/0:7,0:6:18.06:0,18,401	1/1:8,0:8:9.53:65,10,0	1/1:14,0:15:12.24:45,12,0	1/1:7,0:7:15.04:101,15,0
chr10	42498217	.	T	TA	466.59	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-6.485;DP=339;FS=15.835;HRun=8;HaplotypeScore=69.8852;InbreedingCoeff=0.8703;MQ=61.96;MQ0=5;MQRankSum=3.997;QD=18.66;ReadPosRankSum=-1.250;VQSLOD=2.0950;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:63.02:0,63,575	0/0:10,0:10:27.01:0,27,247	0/0:16,0:9:20.89:0,21,176	0/0:7,0:6:5.94:0,6,53	0/0:24,0:24:57.02:0,57,521	0/0:11,0:13:32.05:0,32,281	0/0:12,0:12:30.01:0,30,274	0/0:28,0:27:66.01:0,66,597	0/0:14,0:14:42.02:0,42,384	1/1:1,3:4:9.03:104,9,0	1/1:0,5:5:15.04:173,15,0	0/0:6,0:6:18.01:0,18,165	0/0:7,0:7:15:0,15,137	0/0:12,0:12:36.02:0,36,329	1/1:1,2:3:6.02:69,6,0	0/0:9,0:9:24.01:0,24,220	0/0:18,0:17:48.02:0,48,439	1/1:2,2:4:6.02:69,6,0	0/0:29,0:28:53.21:0,53,474	0/0:17,0:17:48.02:0,48,439	0/0:11,0:10:8.99:0,9,82	0/0:8,0:8:21.01:0,21,192	0/0:9,0:9:27.01:0,27,247	0/0:8,0:8:24.01:0,24,219	1/1:1,8:8:18.05:208,18,0	0/0:17,0:17:45.01:0,45,411	0/0:11,0:11:30.01:0,30,274	0/0:3,0:3:9:0,9,82
chr10	42498426	.	C	CCATGGGTCT	31025.30	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-10.124;DP=461;FS=16.161;HRun=0;HaplotypeScore=104.6894;InbreedingCoeff=0.9665;MQ=82.58;MQ0=0;MQRankSum=-15.275;QD=100.08;ReadPosRankSum=0.767;VQSLOD=4.4842;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,14:21:39.13:1814,39,0	1/1:1,3:4:9.03:374,9,0	0/0:15,0:15:42.12:0,42,1065	0/0:20,0:21:55.44:0,55,1614	1/1:1,19:22:45.15:2176,45,0	1/1:3,21:28:54.19:2639,54,0	1/1:6,10:18:33.11:1360,33,0	1/1:11,19:35:99:3867,99,0	1/1:1,12:17:33.11:1610,33,0	0/0:7,0:7:21.06:0,21,545	0/0:12,0:12:36.12:0,36,1115	0/0:8,0:8:24.08:0,24,721	0/0:16,0:16:42.13:0,42,1235	0/0:10,0:10:30.10:0,30,931	0/0:11,0:11:33.11:0,33,1024	1/1:5,21:32:59.67:2699,60,0	1/1:2,4:7:9.03:387,9,0	0/0:13,0:13:33.11:0,33,1023	1/1:11,9:18:57.20:2458,57,0	1/1:7,16:25:51.18:2400,51,0	1/1:6,6:13:21.07:993,21,0	0/0:8,0:8:21.06:0,21,584	0/0:6,0:6:18.06:0,18,536	0/0:20,0:20:60.20:0,60,1795	0/0:4,0:4:12.04:0,12,365	1/1:3,33:37:15.20:4730,15,0	1/1:3,24:28:63.22:3078,63,0	1/1:0,3:3:9.03:440,9,0
chr10	42498592	.	CT	C	6715.36	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=12.094;DP=531;FS=31.075;HRun=9;HaplotypeScore=64.5708;InbreedingCoeff=0.9892;MQ=67.39;MQ0=3;MQRankSum=-3.587;QD=23.16;ReadPosRankSum=1.341;VQSLOD=3.3313;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,30:33:53.56:662,54,0	1/1:2,10:12:32.89:289,33,0	0/0:31,0:20:21.30:0,21,381	0/0:25,0:19:21.45:0,21,241	1/1:1,31:32:84.03:769,84,0	1/1:1,18:19:42.02:384,42,0	1/1:1,11:12:33.02:302,33,0	1/1:5,24:29:71.95:646,72,0	1/1:2,13:15:39.01:356,39,0	0/0:19,0:19:45.12:0,45,511	0/0:12,0:12:36.10:0,36,407	0/0:10,0:10:27.08:0,27,311	0/0:23,0:23:66.20:0,66,762	0/0:18,0:18:51.15:0,51,588	0/0:14,0:14:42.12:0,42,485	1/1:1,15:16:39.02:357,39,0	1/1:0,18:18:51.03:467,51,0	0/0:13,0:13:36.11:0,36,415	1/1:2,12:13:33.02:302,33,0	1/1:1,20:21:54.02:494,54,0	1/1:0,12:12:36.02:330,36,0	0/0:21,0:20:54.16:0,54,622	0/0:18,0:18:51.14:0,51,580	0/0:15,0:15:45.13:0,45,519	0/0:21,0:21:60.16:0,60,682	1/1:3,24:27:8.81:590,9,0	1/1:1,23:24:66.04:603,66,0	1/1:0,6:6:18.01:165,18,0
chr10	42498814	.	A	AC	14418.64	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=12.466;DP=668;FS=2.457;HRun=1;HaplotypeScore=94.3948;InbreedingCoeff=0.9966;MQ=60.36;MQ0=1;MQRankSum=0.170;QD=39.29;ReadPosRankSum=1.732;VQSLOD=5.3236;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,32:33:90.30:1348,90,0	1/1:0,12:12:36.12:539,36,0	0/0:26,0:23:66:0,66,798	0/0:30,0:27:66.93:0,67,847	1/1:2,13:15:18.06:270,18,0	1/1:1,18:19:48.16:719,48,0	1/1:1,33:34:90.30:1348,90,0	1/1:2,24:22:60.07:823,60,0	1/1:0,23:23:69.23:1034,69,0	0/0:26,0:26:78.25:0,78,1013	0/0:12,0:12:29.71:0,30,353	0/0:27,0:27:78.25:0,78,1013	0/0:28,0:28:84.27:0,84,1091	0/0:27,0:27:81.25:0,81,1036	0/0:26,0:26:78.25:0,78,1012	1/1:0,17:17:48.16:720,48,0	1/1:0,36:36:99:1528,102,0	0/0:24,0:24:66.19:0,66,838	1/1:4,11:14:39.13:584,39,0	1/1:0,19:19:39.13:583,39,0	1/1:2,61:63:99:2653,178,0	0/0:17,0:17:45.11:0,45,554	0/0:13,0:13:36.12:0,36,466	0/0:29,0:29:87.24:0,87,1097	0/0:16,0:15:42.14:0,42,545	1/1:1,30:31:93.24:1326,93,0	1/1:1,18:19:48.16:719,48,0	1/1:0,5:5:15.05:225,15,0
chr10	42499148	.	T	TG	10555.93	PASS	AB=0.875;AC=31;AF=0.554;AN=56;BaseQRankSum=12.971;DP=669;FS=1.800;HRun=1;HaplotypeScore=107.8124;InbreedingCoeff=0.9266;MQ=55.61;MQ0=2;MQRankSum=-4.330;QD=28.30;ReadPosRankSum=0.555;VQSLOD=4.6930;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,31:36:66.18:963,66,0	1/1:1,11:12:21.07:315,21,0	0/0:23,0:18:51.06:0,51,609	0/0:24,0:18:54.11:0,54,661	1/1:2,20:22:30.10:450,30,0	1/1:3,30:32:54.18:798,54,0	1/1:2,11:13:24.08:360,24,0	1/1:1,21:22:51.17:758,51,0	1/1:0,26:27:63.20:922,63,0	0/0:23,0:22:63.20:0,63,806	0/0:20,0:20:60.16:0,60,750	0/0:29,0:29:87.28:0,87,1129	0/0:26,0:26:72.20:0,72,921	0/0:33,0:33:93.28:0,93,1178	0/0:32,0:32:96.30:0,96,1232	1/1:3,18:20:39.09:559,39,0	1/1:3,18:21:39.13:584,39,0	0/1:18,3:19:32.48:32,0,605	1/1:3,19:21:56.17:822,56,0	1/1:2,26:25:33.11:493,33,0	1/1:0,11:11:27.09:405,27,0	0/0:17,0:17:51.17:0,51,662	0/0:20,0:20:60.20:0,60,779	0/0:18,0:18:48.16:0,48,622	0/0:31,0:31:87.28:0,87,1129	1/1:1,30:30:90.26:1324,90,0	1/1:3,35:38:90.26:1322,90,0	1/1:0,14:13:30.10:449,30,0
chr10	42499935	.	T	TTAA	7802.91	PASS	AC=28;AF=0.519;AN=54;BaseQRankSum=10.175;DP=523;FS=4.894;HRun=0;HaplotypeScore=75.8060;InbreedingCoeff=0.9227;MQ=48.20;MQ0=10;MQRankSum=-14.455;QD=31.59;ReadPosRankSum=-2.653;VQSLOD=4.1621;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,9:15:17.64:292,18,0	1/1:1,5:6:12.04:261,12,0	0/0:14,0:10:30.10:0,30,455	0/0:17,0:13:36.12:0,36,578	1/1:3,21:21:30.06:572,30,0	1/1:6,22:27:39.12:799,39,0	1/1:2,10:12:30.10:646,30,0	1/1:8,15:18:48.08:884,48,0	1/1:3,20:23:21.06:432,21,0	0/0:28,0:27:81.26:0,81,1314	0/0:25,0:25:72.21:0,72,1134	0/0:13,0:12:6.69:0,7,477	0/0:18,0:16:48.16:0,48,806	0/0:9,0:10:3.69:0,4,422	0/0:18,0:18:49.41:0,49,803	1/1:3,10:13:9.03:203,9,0	1/1:1,8:8:15.05:337,15,0	0/0:22,0:21:54.17:0,54,865	1/1:3,6:9:24.08:535,24,0	1/1:3,27:29:42.07:828,42,0	./.	0/0:36,0:34:99:0,102,1699	0/0:25,0:24:72.22:0,72,1160	0/0:20,0:20:60.20:0,60,992	0/0:26,0:26:78.27:0,78,1301	1/1:8,16:23:57.19:1203,57,0	1/1:3,18:19:33.05:743,33,0	1/1:1,3:3:3.01:68,3,0
chr10	42500168	.	A	AT	10435.65	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-10.427;DP=679;FS=4.671;HRun=5;HaplotypeScore=69.0933;InbreedingCoeff=0.9871;MQ=54.14;MQ0=2;MQRankSum=4.290;QD=28.67;ReadPosRankSum=0.191;VQSLOD=5.1192;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,38:39:93.30:1224,93,0	1/1:2,5:7:12.04:158,12,0	0/0:21,0:11:29.75:0,30,301	0/0:27,0:13:21.49:0,21,365	1/1:1,27:28:51.12:644,51,0	1/1:1,28:29:63.20:829,63,0	1/1:2,14:16:30.10:395,30,0	1/1:3,21:23:58.25:779,58,0	1/1:2,21:24:52.57:708,53,0	0/0:27,0:27:78.20:0,78,837	0/0:34,0:34:90.23:0,90,967	0/0:15,0:16:46.36:0,46,486	0/0:21,0:21:57.14:0,57,613	0/0:26,0:29:74.65:0,75,770	0/0:20,0:23:60.15:0,60,645	1/1:1,15:20:41.86:586,42,0	1/1:2,29:31:74.12:1020,74,0	0/0:18,0:18:48.12:0,48,516	1/1:2,15:16:45.15:592,45,0	1/1:7,35:42:90.21:1132,90,0	1/1:1,20:21:45.15:592,45,0	0/0:25,0:25:72.18:0,72,774	0/0:28,0:28:78.19:0,78,838	0/0:19,0:21:50.76:0,51,535	0/0:25,0:25:75.18:0,75,798	1/1:5,20:26:33.96:794,34,0	1/1:2,27:29:66.21:868,66,0	1/1:1,3:3:9.03:115,9,0
chr10	42500504	.	T	TAGA	17018.98	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=9.331;DP=623;FS=1.000;HRun=0;HaplotypeScore=114.1072;InbreedingCoeff=0.9933;MQ=53.84;MQ0=0;MQRankSum=-11.386;QD=53.18;ReadPosRankSum=-2.403;VQSLOD=6.3458;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,20:23:66.18:1456,66,0	1/1:2,5:7:18.06:400,18,0	0/0:21,0:18:42.14:0,42,705	0/0:15,0:13:35.99:0,36,574	1/1:5,32:37:81.11:1650,81,0	1/1:3,26:29:72.25:1632,72,0	1/1:0,14:13:39.13:898,39,0	1/1:6,28:33:84.25:1747,84,0	1/1:1,17:18:42.14:966,42,0	0/0:24,0:24:72.25:0,72,1228	0/0:32,0:32:96.31:0,96,1611	0/0:24,0:24:69.22:0,69,1148	0/0:29,0:29:87.30:0,87,1484	0/0:27,0:27:81.27:0,81,1354	0/0:23,0:23:69.21:0,69,1125	1/1:3,20:22:57.16:1265,57,0	1/1:1,12:13:21.07:480,21,0	0/0:22,0:22:39.57:0,40,951	1/1:5,11:15:42.13:922,42,0	1/1:4,24:30:72.25:1607,72,0	1/1:3,10:13:21.07:481,21,0	0/0:18,0:18:54.16:0,54,869	0/0:28,0:28:78.27:0,78,1331	0/0:19,0:18:25.33:0,25,792	0/0:21,0:21:60.21:0,60,1024	1/1:4,18:21:60.21:1381,60,0	1/1:3,31:33:84.24:1858,84,0	1/1:1,5:6:12.04:277,12,0
chr10	42501867	.	AT	A	6528.47	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=17.584;DP=573;FS=6.565;HRun=9;HaplotypeScore=113.0447;InbreedingCoeff=0.9877;MQ=53.59;MQ0=11;MQRankSum=-0.336;QD=21.62;ReadPosRankSum=1.725;VQSLOD=4.5187;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,15:19:36.01:329,36,0	1/1:1,11:12:30.01:274,30,0	0/0:23,0:4:12.03:0,12,133	0/0:20,1:7:18.05:0,18,207	1/1:3,26:29:63:570,63,0	1/1:2,19:21:54.03:494,54,0	1/1:3,12:15:21:190,21,0	1/1:6,17:19:45.02:411,45,0	1/1:3,9:12:27.48:248,27,0	0/0:29,0:29:75.21:0,75,856	0/0:18,0:19:50.20:0,50,608	0/0:22,0:21:60.18:0,60,692	0/0:21,0:21:60.13:0,60,669	0/0:22,0:22:60.16:0,60,682	0/0:24,0:24:69.20:0,69,788	1/1:2,17:19:48.02:439,48,0	1/1:5,17:22:57.88:513,58,0	0/0:13,0:13:35.83:0,36,382	1/1:2,16:16:45.02:410,45,0	1/1:2,25:27:66:603,66,0	1/1:2,17:19:51.02:463,51,0	0/0:16,0:16:41.91:0,42,484	0/0:24,0:24:65.97:0,66,729	0/0:23,0:23:63.17:0,63,717	0/0:14,0:14:27.08:0,27,312	1/1:3,14:17:10.40:349,10,0	1/1:2,30:32:90.05:823,90,0	1/1:0,17:17:45.02:412,45,0
chr10	42502117	.	CT	C	8016.17	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=15.500;DP=650;FS=4.323;HRun=7;HaplotypeScore=74.5370;InbreedingCoeff=0.9893;MQ=57.82;MQ0=19;MQRankSum=-1.855;QD=23.44;ReadPosRankSum=-0.620;VQSLOD=4.9085;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,31:32:84.19:855,84,0	1/1:0,15:15:42.10:428,42,0	0/0:33,0:9:15.03:0,15,168	0/0:31,1:11:11.29:0,11,228	1/1:0,20:20:57.13:580,57,0	1/1:5,21:25:60.13:612,60,0	1/1:0,15:15:39.08:396,39,0	1/1:5,29:25:51.07:503,51,0	1/1:3,19:22:57.12:581,57,0	0/0:28,0:28:78.23:0,78,959	0/0:23,0:23:69.22:0,69,868	0/0:18,0:18:45.14:0,45,566	0/0:21,0:21:54.16:0,54,666	0/0:17,0:17:51.14:0,51,616	0/0:21,0:21:57.17:0,57,707	1/1:1,10:11:27.06:275,27,0	1/1:4,19:23:37.71:531,38,0	0/0:29,0:29:69.21:0,69,852	1/1:3,19:20:45.08:452,45,0	1/1:1,24:25:63.13:642,63,0	1/1:4,15:19:42.09:428,42,0	0/0:17,0:17:45.14:0,45,555	0/0:27,0:27:72.23:0,72,902	0/0:14,0:14:36.12:0,36,453	0/0:28,0:27:75.24:0,75,943	1/1:6,25:31:37.37:684,37,0	1/1:4,29:33:72.15:734,72,0	1/1:2,12:14:13.15:314,13,0
chr10	42502228	.	T	TGTG	15500.36	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=17.695;DP=537;FS=10.418;HRun=0;HaplotypeScore=143.6931;InbreedingCoeff=0.9843;MQ=60.03;MQ0=3;MQRankSum=-16.893;QD=60.31;ReadPosRankSum=0.118;VQSLOD=5.8544;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,15:17:45.15:1035,45,0	1/1:4,8:12:36.11:766,36,0	0/0:24,0:21:63.22:0,63,1124	0/0:19,0:17:50.53:0,51,860	1/1:2,26:28:71.07:1614,71,0	1/1:2,21:22:69.24:1529,69,0	1/1:1,10:11:27.09:618,27,0	1/1:4,11:13:27.09:571,27,0	1/1:2,16:18:54.17:1139,54,0	0/0:25,0:25:75.25:0,75,1360	0/0:20,0:20:60.18:0,60,1058	0/0:25,0:25:75.26:0,75,1393	0/0:19,0:19:57.20:0,57,1063	0/0:17,0:17:51.17:0,51,917	0/0:30,0:30:90.27:0,90,1642	1/1:2,9:11:33.11:762,33,0	1/1:0,7:8:24.08:555,24,0	0/0:20,0:20:54.16:0,54,963	1/1:5,16:19:25.22:1230,25,0	1/1:4,19:23:62.04:1416,62,0	1/1:0,4:4:6.02:142,6,0	0/0:32,0:32:96.32:0,96,1756	0/0:17,0:17:51.15:0,51,917	0/0:19,0:19:57.20:0,57,1063	0/0:13,0:13:39.12:0,39,696	1/1:8,19:27:76.11:1630,76,0	1/1:7,24:31:93.30:2017,93,0	1/1:0,6:7:21.07:476,21,0
chr10	42502232	.	C	CA	9319.33	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=18.338;DP=539;FS=20.455;HRun=0;HaplotypeScore=140.8149;InbreedingCoeff=0.9764;MQ=59.77;MQ0=3;MQRankSum=-16.837;QD=36.55;ReadPosRankSum=1.489;VQSLOD=2.8886;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,18:18:42.12:592,42,0	1/1:0,9:9:24.08:344,24,0	0/0:23,0:20:60.19:0,60,799	0/0:18,0:16:25.11:0,25,549	1/1:0,29:29:70.58:1031,71,0	1/1:0,24:23:69.23:977,69,0	1/1:0,11:11:30.03:403,30,0	1/1:1,13:11:24.08:354,24,0	1/1:0,17:17:48.15:659,48,0	0/0:28,0:28:81.26:0,81,1104	0/0:20,0:20:57.19:0,57,795	0/0:25,0:25:75.25:0,75,1047	0/0:20,0:20:60.17:0,60,802	0/0:17,0:17:51.16:0,51,696	0/0:31,0:31:93.13:0,93,1255	1/1:1,9:10:30.08:409,30,0	1/1:1,7:7:21.07:300,21,0	0/0:19,0:19:54.17:0,54,736	1/1:3,20:19:60.10:832,60,0	1/1:0,24:24:63.20:875,63,0	1/1:1,4:5:3.68:72,4,0	0/0:34,0:34:99:0,102,1373	0/0:17,0:17:51.17:0,51,711	0/0:19,0:19:53.94:0,54,752	0/0:13,0:13:39.12:0,39,529	1/1:0,27:27:81.24:1125,81,0	1/1:2,27:29:78.22:1080,78,0	1/1:1,6:7:20.90:268,21,0
chr10	42503425	.	A	AT	9825.65	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-13.016;DP=630;FS=18.691;HRun=7;HaplotypeScore=52.4409;InbreedingCoeff=0.9916;MQ=55.30;MQ0=25;MQRankSum=3.665;QD=29.51;ReadPosRankSum=1.082;VQSLOD=3.1958;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,20:25:25.22:587,25,0	1/1:0,12:12:36.11:435,36,0	0/0:55,0:19:37.29:0,37,331	0/0:36,0:13:17.21:0,17,192	1/1:1,25:26:72.22:868,72,0	1/1:2,24:26:69.21:834,69,0	1/1:0,13:13:39.12:471,39,0	1/1:9,26:34:65.99:863,66,0	1/1:0,21:21:57.17:689,57,0	0/0:33,0:33:93.13:0,93,893	0/0:23,0:23:66.11:0,66,637	0/0:14,0:14:36.06:0,36,348	0/0:14,0:13:30.05:0,30,290	0/0:16,0:16:48.04:0,48,453	0/0:17,0:17:51.08:0,51,492	1/1:0,14:14:39.12:471,39,0	1/1:3,24:27:43.23:788,43,0	0/0:22,1:23:23.85:0,24,507	1/1:11,12:18:32.97:377,33,0	1/1:4,26:30:78.24:942,78,0	1/1:1,14:15:42.13:507,42,0	0/0:21,0:21:54.08:0,54,521	0/0:17,0:17:48.08:0,48,463	0/0:13,0:13:30.05:0,30,290	0/0:15,0:15:45.06:0,45,430	1/1:2,22:24:40.22:756,40,0	1/1:4,25:29:69.21:832,69,0	1/1:1,12:13:10.17:406,10,0
chr10	42503541	.	C	CTTTT	10836.86	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=1.262;DP=553;FS=4.864;HRun=8;HaplotypeScore=91.6598;InbreedingCoeff=0.9960;MQ=57.46;MQ0=2;MQRankSum=-2.496;QD=34.29;ReadPosRankSum=-2.774;VQSLOD=2.6471;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:12,13:24:50.39:1132,50,0	1/1:4,9:14:27.09:614,27,0	0/0:13,0:12:27.02:0,27,351	0/0:16,0:13:27.02:0,27,338	1/1:9,0:38:74.81:1028,75,0	1/1:2,0:21:45.06:540,45,0	1/1:3,0:12:20.90:235,21,0	1/1:9,8:19:33.11:585,33,0	1/1:3,0:14:24.03:278,24,0	0/0:20,0:20:54.14:0,54,798	0/0:26,0:26:66.20:0,66,978	0/0:18,0:18:48.10:0,48,684	0/0:19,0:19:45.12:0,45,681	0/0:9,0:9:24.08:0,24,361	0/0:13,0:13:39.13:0,39,590	1/1:1,0:10:18.06:224,18,0	1/1:7,0:33:64.38:379,64,0	0/0:23,0:24:44.33:0,44,840	1/1:8,13:25:54.03:994,54,0	1/1:9,15:26:69.21:1482,69,0	1/1:3,4:8:20.98:295,21,0	0/0:17,0:17:44.72:0,45,660	0/0:34,0:34:90.22:0,90,1315	0/0:11,0:11:27.09:0,27,409	0/0:17,0:17:48.15:0,48,706	1/1:9,15:24:45.13:924,45,0	1/1:5,22:32:75.25:1645,75,0	1/1:4,6:12:21.07:481,21,0
chr10	42504577	.	A	AT	10050.74	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=10.621;DP=586;FS=12.532;HRun=8;HaplotypeScore=116.5286;InbreedingCoeff=0.9856;MQ=72.74;MQ0=0;MQRankSum=-5.697;QD=25.71;ReadPosRankSum=0.408;VQSLOD=3.5174;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,27:35:83.97:946,84,0	1/1:2,6:8:19.30:211,19,0	0/0:19,0:19:39.71:0,40,339	0/0:9,0:8:8.98:0,9,76	1/1:9,23:32:72.06:768,72,0	1/1:4,23:27:66.03:742,66,0	1/1:1,14:15:39.12:450,39,0	1/1:11,23:34:47.74:788,48,0	1/1:2,21:23:57.17:658,57,0	1/1:6,22:28:66.20:762,66,0	1/1:3,13:15:24.07:273,24,0	0/0:16,0:16:48.03:0,48,439	0/0:21,0:21:54.02:0,54,494	0/0:32,0:32:90.04:0,90,823	1/1:2,13:15:39.12:450,39,0	0/0:20,0:20:57.03:0,57,521	1/1:0,15:15:42.12:476,42,0	1/1:4,8:11:30.05:331,30,0	1/1:9,13:22:42.12:485,42,0	1/1:5,25:30:69.21:796,69,0	1/1:6,8:14:18.05:208,18,0	0/0:31,0:32:86.08:0,86,775	0/0:28,0:28:84.03:0,84,763	0/0:18,0:18:44.93:0,45,396	1/1:4,16:20:36.11:415,36,0	1/1:3,13:16:38.19:471,38,0	1/1:5,18:23:57.16:649,57,0	1/1:0,5:5:15.04:173,15,0
chr10	42504630	.	C	CT	8424.90	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=4.879;DP=561;FS=11.499;HRun=8;HaplotypeScore=118.7863;InbreedingCoeff=0.9879;MQ=69.85;MQ0=0;MQRankSum=-3.019;QD=25.45;ReadPosRankSum=-0.250;VQSLOD=3.4491;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,25:31:60.18:691,60,0	1/1:2,3:5:11.98:115,12,0	0/0:12,0:13:23.01:0,23,192	0/0:9,0:9:17.34:0,17,148	1/1:4,30:34:78.21:883,78,0	0/0:26,0:26:69.01:0,69,627	0/0:15,0:15:36.01:0,36,324	1/1:8,25:33:75.22:866,75,0	0/0:23,0:23:66.04:0,66,604	1/1:9,14:23:26.68:544,27,0	1/1:1,18:18:45.09:504,45,0	0/0:21,0:21:51.02:0,51,466	0/0:13,0:13:36.02:0,36,329	0/0:29,0:29:71.99:0,72,650	1/1:3,19:22:57.16:650,57,0	0/0:18,0:18:48.02:0,48,439	1/1:3,0:9:20.04:110,20,0	1/1:1,11:11:30.09:345,30,0	1/1:7,15:22:48.13:546,48,0	1/1:4,27:31:69.16:779,69,0	1/1:2,11:13:24.07:277,24,0	0/0:20,0:20:53.40:0,53,475	0/0:29,0:29:77.91:0,78,692	0/0:14,0:14:36.02:0,36,329	1/1:3,23:26:66.15:745,66,0	1/1:4,11:14:11.63:375,12,0	1/1:5,20:25:57.16:647,57,0	1/1:0,10:10:30.09:346,30,0
chr10	42505135	.	GA	G	2190.94	PASS	AB=0.748;AC=12;AF=0.214;AN=56;BaseQRankSum=4.384;DP=815;FS=2.746;HRun=1;HaplotypeScore=295.8762;InbreedingCoeff=-0.0798;MQ=62.65;MQ0=0;MQRankSum=-8.979;QD=7.14;ReadPosRankSum=-3.199;VQSLOD=-0.6133;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:24,8:32:0.52:1,0,402	0/1:11,7:18:56.84:57,0,284	0/0:28,0:27:81.22:0,81,1244	0/0:36,0:34:91.79:0,92,1440	0/0:14,9:23:6.83:0,7,71	0/0:22,8:29:50.97:0,51,761	0/1:23,8:31:0.93:1,0,295	0/1:30,33:63:99:1137,0,1128	0/0:27,14:41:44.66:0,45,554	0/1:28,10:38:99:317,0,874	0/0:18,7:25:27.06:0,27,423	0/0:30,0:30:87.28:0,87,1365	0/0:30,0:30:90.31:0,90,1439	0/0:34,0:34:99:0,102,1628	0/0:27,8:34:17.97:0,18,235	0/0:21,1:22:36.09:0,36,450	0/0:4,3:7:3.01:0,3,48	0/1:3,4:7:97.59:103,0,98	0/1:17,4:20:99:107,0,664	0/0:26,7:32:23.86:0,24,353	0/1:8,10:16:33.13:33,0,107	0/0:28,0:28:84.29:0,84,1340	0/0:30,0:30:90.29:0,90,1415	0/0:37,0:37:99:0,108,1726	0/0:26,13:39:38.58:0,39,542	0/1:20,13:32:99:448,0,681	0/1:37,6:43:47.41:47,0,836	1/1:0,3:3:6.02:84,6,0
chr10	42505138	.	A	ATGTATGTACACCCGCATGTG	59764.93	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=3.012;DP=893;FS=12.244;HRun=0;HaplotypeScore=442.0495;InbreedingCoeff=0.9528;MQ=60.20;MQ0=0;MQRankSum=-18.926;QD=93.97;ReadPosRankSum=-1.177;VQSLOD=3.9177;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:29,5:34:42.43:2080,42,0	1/1:11,7:18:33.09:2001,33,0	0/0:27,0:26:72.23:0,72,2788	0/0:39,0:36:92.77:0,93,3452	1/1:17,4:31:5.37:224,5,0	1/1:27,2:29:66.21:2865,66,0	1/1:20,9:34:48.14:2406,48,0	1/1:65,0:65:99:9849,172,0	1/1:25,18:43:84.29:5885,84,0	1/1:27,13:47:12.55:6506,13,0	1/1:16,7:28:12.51:885,13,0	0/0:32,0:32:58.51:0,59,3583	0/0:32,0:32:93.27:0,93,4474	0/0:32,0:32:84.29:0,84,4007	1/1:21,9:37:53.06:2571,53,0	1/1:9,14:35:42.14:3215,42,0	1/1:7,1:13:12.04:530,12,0	1/1:10,0:10:18.06:1269,18,0	1/1:13,5:21:48.15:2503,48,0	1/1:18,14:36:25.97:1786,26,0	1/1:18,0:16:14.90:665,15,0	0/0:28,0:28:81.28:0,81,3754	0/0:29,0:29:78.27:0,78,3961	0/0:38,0:38:99:0,99,4850	1/1:30,12:50:54.58:3390,55,0	1/1:29,6:34:87.23:4992,87,0	1/1:21,18:44:78.27:5670,78,0	1/1:4,0:4:9.03:474,9,0
chr10	42505145	.	T	TACAC	8044.24	PASS	AB=0.950;AC=25;AF=0.446;AN=56;BaseQRankSum=15.233;DP=788;FS=15.854;HRun=0;HaplotypeScore=323.8391;InbreedingCoeff=-0.0053;MQ=60.33;MQ0=0;MQRankSum=-14.061;QD=15.62;ReadPosRankSum=4.524;VQSLOD=3.1329;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:25,2:28:79.81:491,0,80	0/1:15,0:15:47.19:287,0,47	0/0:28,0:26:78.24:0,78,1503	0/0:45,0:38:61.03:0,61,1696	1/1:25,0:25:1.21:85,1,0	1/1:17,9:25:38.76:877,39,0	0/1:25,0:25:99:213,0,144	0/1:44,10:54:99:762,0,1773	0/1:39,0:39:8.57:688,0,9	0/1:42,0:42:99:409,0,1340	1/1:21,0:21:11.01:343,11,0	0/0:33,0:33:84.86:0,85,1802	0/0:36,0:36:99:0,102,2085	0/0:33,0:33:96.33:0,96,1966	0/1:25,0:25:99:286,0,165	1/1:34,1:35:32.76:677,33,0	1/1:12,0:12:2.98:87,3,0	0/1:7,1:8:68.64:69,0,189	0/1:13,0:12:99:208,0,339	1/1:27,0:27:19.92:575,20,0	0/1:16,3:17:55.75:88,0,56	0/0:31,0:31:90.31:0,90,1874	0/0:28,0:28:84.29:0,84,1744	0/0:35,0:35:99:0,105,2200	0/1:38,0:38:93.09:606,0,93	0/1:27,6:32:99:676,0,652	0/1:30,0:30:99:618,0,213	0/0:4,0:4:9.03:0,9,139
chr10	42505174	.	G	GGT	7584.89	PASS	AB=0.656;AC=39;AF=0.696;AN=56;BaseQRankSum=12.099;DP=831;FS=3.667;HRun=0;HaplotypeScore=319.9372;InbreedingCoeff=0.8461;MQ=49.19;MQ0=7;MQRankSum=-8.566;QD=14.20;ReadPosRankSum=-3.573;VQSLOD=3.7637;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,22:31:24.02:307,24,0	1/1:3,9:12:9.03:147,9,0	0/0:42,0:26:42.13:0,42,509	0/0:57,0:31:44.27:0,44,562	1/1:17,1:33:20.23:183,20,0	1/1:5,14:20:23.14:336,23,0	1/1:5,15:20:18.04:270,18,0	1/1:30,15:44:32.09:1162,32,0	1/1:12,25:37:38.76:582,39,0	0/1:20,0:42:23.59:581,0,24	1/1:11,0:30:26.99:239,27,0	0/0:35,0:35:93.26:0,93,1138	0/0:37,0:38:99:0,108,1301	0/0:29,0:31:83.90:0,84,970	1/1:11,0:34:53.86:445,54,0	1/1:28,0:35:5.94:41,6,0	1/1:6,0:12:14.37:112,14,0	1/1:5,1:11:17.39:196,17,0	1/1:12,5:15:36.09:534,36,0	1/1:7,14:21:10.28:193,10,0	1/1:10,8:16:11.75:170,12,0	0/0:33,0:33:84.26:0,84,1042	0/0:25,0:26:56.68:0,57,657	0/0:34,0:34:87.23:0,87,1061	1/1:17,0:40:23.70:209,24,0	1/1:11,25:35:3.89:1102,4,0	1/1:15,13:29:31.36:530,31,0	1/1:2,5:7:15.05:245,15,0
chr10	42505205	.	ATG	A	10371.20	PASS	AB=1.000;AC=39;AF=0.696;AN=56;BaseQRankSum=9.715;DP=871;FS=6.092;HRun=0;HaplotypeScore=235.0946;InbreedingCoeff=0.9008;MQ=48.02;MQ0=14;MQRankSum=-2.804;QD=19.24;ReadPosRankSum=-0.348;VQSLOD=4.2881;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,28:37:20.77:269,21,0	1/1:5,5:10:12.04:154,12,0	0/0:59,0:30:70.36:0,70,1021	0/0:59,0:31:69.11:0,69,1039	1/1:16,20:35:48.61:616,49,0	1/1:1,22:23:27.09:346,27,0	1/1:10,15:25:36.57:446,37,0	1/1:29,16:44:96.07:1098,96,0	1/1:17,20:36:43.07:700,43,0	1/1:18,17:34:72.19:890,72,0	1/1:8,21:29:54.38:692,54,0	0/0:39,0:39:99:0,105,1693	0/0:42,0:42:99:0,111,1813	0/0:31,0:31:87.25:0,87,1370	1/1:11,28:37:75.14:908,75,0	1/1:6,13:19:11.86:143,12,0	0/1:13,0:13:80.21:80,0,89	1/1:3,10:13:23.91:302,24,0	1/1:13,6:17:36:376,36,0	1/1:16,15:30:60.46:701,60,0	1/1:4,21:23:18.01:214,18,0	0/0:40,0:40:99:0,108,1746	0/0:24,0:24:66.21:0,66,1063	0/0:38,0:38:66.43:0,66,1400	1/1:13,20:30:36.08:462,36,0	1/1:12,28:37:93.29:1177,93,0	1/1:10,13:22:51.11:606,51,0	1/1:1,6:7:15.05:189,15,0
chr10	42505368	.	C	CAGA	25018.47	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-1.971;DP=731;FS=4.630;HRun=0;HaplotypeScore=111.7204;InbreedingCoeff=0.9988;MQ=78.86;MQ0=0;MQRankSum=-7.576;QD=50.54;ReadPosRankSum=2.811;VQSLOD=7.3331;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,24:25:69.24:1493,69,0	1/1:0,8:9:24.08:520,24,0	0/0:25,0:25:62.56:0,63,906	0/0:23,0:23:48.60:0,49,759	1/1:3,24:27:66.23:1427,66,0	1/1:3,19:22:54.19:1168,54,0	1/1:2,14:16:42.14:909,42,0	1/1:8,15:25:63.19:1271,63,0	1/1:3,38:44:99:2338,108,0	1/1:1,35:36:99:2234,105,0	1/1:3,21:24:57.20:1222,57,0	0/0:32,0:32:81.28:0,81,1266	0/0:45,0:45:99:0,120,1877	0/0:34,0:34:96.30:0,96,1458	1/1:9,22:34:60.21:1299,60,0	1/1:5,11:17:33.11:714,33,0	1/1:3,19:22:51.18:1104,51,0	1/1:1,10:11:30.10:649,30,0	1/1:5,15:19:42.14:909,42,0	1/1:6,32:37:90.31:1941,90,0	1/1:8,20:28:54.18:1142,54,0	0/0:41,0:41:99:0,105,1639	0/0:21,0:21:60.20:0,60,939	0/0:15,0:15:45.15:0,45,704	1/1:3,19:23:48.12:993,48,0	1/1:6,29:36:81.23:1654,81,0	1/1:6,24:30:75.21:1578,75,0	1/1:0,7:7:21.07:455,21,0
chr10	42506065	.	C	CTA	12782.06	PASS	AC=38;AF=0.704;AN=54;BaseQRankSum=15.091;DP=528;FS=13.211;HRun=0;HaplotypeScore=133.4111;InbreedingCoeff=0.9898;MQ=81.43;MQ0=0;MQRankSum=-13.577;QD=34.45;ReadPosRankSum=2.287;VQSLOD=6.2732;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,26:27:36.11:603,36,0	1/1:0,11:12:24.08:434,24,0	0/0:26,0:26:75.11:0,75,1049	0/0:18,0:18:39.10:0,39,575	1/1:1,23:26:30.09:532,30,0	1/1:0,20:20:42.07:735,42,0	1/1:2,16:18:36.12:664,36,0	1/1:0,26:26:75.03:994,75,0	1/1:1,24:26:48.16:870,48,0	1/1:0,24:24:60.15:1004,60,0	1/1:0,22:23:39.13:711,39,0	0/0:17,0:17:51.17:0,51,826	0/0:17,0:17:48.16:0,48,773	0/0:19,0:19:57.19:0,57,926	1/1:1,18:19:45.15:832,45,0	1/1:0,19:20:48.16:883,48,0	1/1:0,9:9:24.08:453,24,0	1/1:0,7:7:15.05:279,15,0	1/1:0,14:14:36.11:629,36,0	1/1:3,19:22:36.12:650,36,0	1/1:1,21:23:11.99:177,12,0	0/0:24,0:24:72.24:0,72,1149	0/0:21,0:21:62.78:0,63,932	0/0:13,0:13:39.12:0,39,613	1/1:0,10:11:18.06:332,18,0	1/1:0,20:21:57.16:1032,57,0	1/1:1,22:23:54.12:966,54,0	./.
chr10	42506326	.	GT	G	2213.50	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=7.705;DP=629;FS=5.524;HRun=10;HaplotypeScore=99.4685;InbreedingCoeff=0.9610;MQ=68.64;MQ0=0;MQRankSum=-0.259;QD=19.08;ReadPosRankSum=0.420;VQSLOD=3.8073;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:75.06:0,75,799	0/0:6,0:6:15.04:0,15,166	0/0:20,0:20:25.36:0,25,350	0/0:13,1:14:16.37:0,16,165	1/1:5,24:29:32.80:513,33,0	1/1:3,30:33:83.98:728,84,0	1/1:2,13:15:8.81:305,9,0	0/0:25,1:27:33.93:0,34,578	1/1:2,14:16:40.81:344,41,0	0/0:23,1:24:34.07:0,34,591	0/0:28,0:28:75.20:0,75,828	0/0:17,0:17:48.13:0,48,531	0/0:19,1:20:31.12:0,31,571	0/0:18,0:19:53.97:0,54,570	0/0:23,0:24:63:0,63,671	1/1:3,20:23:56.98:495,57,0	0/0:19,0:19:27.54:0,28,463	0/0:18,1:19:25.08:0,25,501	0/0:33,2:34:32.19:0,32,785	0/0:22,2:24:7.99:0,8,506	0/0:13,0:13:30.07:0,30,324	0/0:31,0:32:78.04:0,78,836	0/0:30,0:32:92.92:0,93,991	0/0:17,0:17:42.11:0,42,464	0/0:18,0:18:45.04:0,45,471	0/0:32,1:34:61.02:0,61,883	0/0:27,0:27:72.18:0,72,784	0/0:12,0:12:23.48:0,23,223
chr10	42506691	.	T	TA	10133.32	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=14.018;DP=526;FS=3.984;HRun=6;HaplotypeScore=177.8274;InbreedingCoeff=0.9770;MQ=71.41;MQ0=0;MQRankSum=-14.741;QD=27.39;ReadPosRankSum=1.189;VQSLOD=2.5608;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,16:18:42.77:511,43,0	1/1:3,6:9:18.06:226,18,0	0/0:18,0:18:42.08:0,42,421	0/0:12,0:12:27.01:0,27,264	1/1:5,27:32:66.21:829,66,0	1/1:4,17:21:48.12:586,48,0	1/1:4,12:16:39.06:457,39,0	1/1:10,13:23:48.10:573,48,0	1/1:2,15:17:39.12:490,39,0	1/1:3,22:25:69.22:865,69,0	1/1:6,18:24:51.12:623,51,0	0/0:15,0:15:42.10:0,42,429	0/0:17,0:17:48.11:0,48,490	0/0:16,0:16:39.09:0,39,398	1/1:3,18:21:45.14:565,45,0	1/1:2,0:20:47.99:439,48,0	1/1:4,11:15:36.01:423,36,0	1/1:3,7:10:18.06:225,18,0	1/1:4,12:16:42.09:510,42,0	1/1:3,19:22:51.16:641,51,0	1/1:1,3:4:6.02:75,6,0	0/0:26,0:26:69.14:0,69,697	0/0:36,0:36:99:0,99,1002	0/0:16,0:16:30.06:0,30,306	1/1:3,17:20:48.15:603,48,0	1/1:6,25:31:69.18:845,69,0	1/1:7,12:18:39.08:472,39,0	1/1:0,7:7:15.01:172,15,0
chr10	42507670	.	G	GT	221.48	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=1.897;DP=606;FS=3.860;HRun=8;HaplotypeScore=159.8913;InbreedingCoeff=0.6395;MQ=70.34;MQ0=5;MQRankSum=1.600;QD=5.99;ReadPosRankSum=-0.606;VQSLOD=0.0639;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,105,960	0/0:12,0:12:30:0,30,270	0/0:27,0:16:23.94:0,24,174	0/1:25,0:14:13.28:13,0,82	0/0:24,0:23:60.01:0,60,544	0/0:10,0:10:27.01:0,27,247	0/0:12,0:12:32.94:0,33,287	0/0:33,0:33:83.23:0,83,736	0/0:13,0:13:32.99:0,33,297	0/0:30,0:31:74.06:0,74,665	0/0:23,0:23:63.03:0,63,576	0/0:13,0:13:39.02:0,39,357	0/0:13,0:13:36.01:0,36,329	0/0:16,0:16:41.24:0,41,364	0/0:21,0:21:57.03:0,57,522	1/1:3,9:12:27.08:312,27,0	0/0:37,0:37:99:0,99,906	0/0:21,0:21:54.02:0,54,492	0/0:30,0:29:62.24:0,62,556	0/0:30,0:30:84.03:0,84,764	0/0:31,1:32:43.39:0,43,645	0/0:21,0:21:59.77:0,60,533	0/0:19,0:19:57.01:0,57,516	0/0:9,0:9:20.99:0,21,188	0/0:28,0:28:84.05:0,84,768	0/0:27,0:27:66.02:0,66,600	0/0:20,0:20:50.98:0,51,458	0/0:6,0:6:12.01:0,12,110
chr10	42508322	.	GTCTC	G	395.52	PASS	AB=0.970;AC=5;AF=0.093;AN=54;BaseQRankSum=2.392;DP=588;FS=6.791;HRun=0;HaplotypeScore=121.8408;InbreedingCoeff=0.2410;MQ=56.72;MQ0=9;MQRankSum=1.752;QD=4.44;ReadPosRankSum=2.303;VQSLOD=1.7113;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:21:13.01:0,13,167	0/0:9,0:9:3.90:0,4,55	./.	0/0:32,0:15:8.86:0,9,114	0/0:28,0:28:5.97:0,6,88	0/0:11,0:17:3.01:0,3,52	0/0:23,0:21:5.53:0,6,32	0/0:35,0:35:32.44:0,32,428	0/0:13,0:16:13.02:0,13,345	0/0:23,0:24:42.14:0,42,879	0/0:19,0:19:8.24:0,8,102	0/0:13,0:19:14.72:0,15,342	0/0:11,0:10:14.01:0,14,322	0/0:18,0:18:30.08:0,30,621	0/0:21,0:24:14.77:0,15,165	1/1:12,10:23:30.09:453,30,0	0/1:27,2:30:43.52:44,0,738	0/0:16,0:16:14.64:0,15,135	0/0:23,0:20:8.51:0,9,142	0/1:12,0:11:0:0,0,0	0/0:17,0:16:2.99:0,3,24	0/0:15,0:18:9.03:0,9,165	0/0:14,0:14:9.03:0,9,157	0/0:27,1:29:2.99:0,3,963	0/0:19,0:20:14.99:0,15,177	0/0:27,0:26:19.44:0,19,358	0/1:24,0:24:5.23:5,0,210	0/0:17,0:17:3.48:0,3,71
chr10	42508410	.	GTC	G	2810.46	PASS	AC=34;AF=0.630;AN=54;BaseQRankSum=11.124;DP=460;FS=1.046;HRun=0;HaplotypeScore=127.9461;InbreedingCoeff=0.7789;MQ=66.73;MQ0=8;MQRankSum=-7.400;QD=13.78;ReadPosRankSum=1.453;VQSLOD=3.7719;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,18:21:21.07:273,21,0	1/1:0,2:2:3.01:39,3,0	0/0:38,0:20:41.41:0,41,595	0/0:65,0:38:29.93:0,30,561	1/1:2,15:17:2.92:31,3,0	1/1:1,9:9:8.96:90,9,0	1/1:4,9:12:3.01:31,3,0	1/1:5,8:11:24.06:293,24,0	1/1:6,3:9:0.59:61,1,0	1/1:1,19:18:49.03:585,49,0	./.	0/0:17,0:17:48.16:0,48,809	0/0:15,0:14:39.13:0,39,654	0/0:16,0:16:42.14:0,42,713	1/1:3,8:11:3.01:39,3,0	0/0:10,0:10:23.67:0,24,365	0/0:16,0:15:42.14:0,42,697	1/1:0,10:10:11.98:135,12,0	1/1:5,7:10:18.06:226,18,0	1/1:3,10:12:15.05:189,15,0	1/1:3,10:12:5.81:78,6,0	0/0:19,0:19:54.18:0,54,907	0/0:18,0:18:54.17:0,54,892	0/0:32,0:32:75.24:0,75,1242	1/1:2,5:7:3.01:37,3,0	1/1:5,13:18:42.53:515,43,0	1/1:2,11:13:27.09:351,27,0	1/1:1,1:2:3.01:39,3,0
chr10	42508430	.	G	GTC	673.31	PASS	AB=1.000;AC=31;AF=0.574;AN=54;BaseQRankSum=8.268;DP=398;FS=0.863;HRun=0;HaplotypeScore=114.1262;InbreedingCoeff=0.5774;MQ=46.88;MQ0=26;MQRankSum=-3.609;QD=3.54;ReadPosRankSum=-0.551;VQSLOD=2.5915;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:24:5.32:41,5,0	0/1:1,0:1:0:0,0,0	0/0:22,0:9:12.04:0,12,148	0/0:25,0:11:8.81:0,9,71	1/1:11,4:15:3:29,3,0	1/1:14,0:11:0.89:2,1,0	1/1:12,0:10:0.47:1,0,0	0/1:9,0:5:0:0,0,0	1/1:8,0:10:0.46:1,0,0	1/1:18,1:15:39.10:466,39,0	0/1:6,0:6:0:0,0,0	0/0:17,0:17:41.74:0,42,554	0/0:15,0:15:36.10:0,36,454	0/0:18,0:18:36.10:0,36,462	1/1:11,0:10:3.01:34,3,0	0/1:10,0:10:0.17:0,0,0	0/0:19,0:13:27.07:0,27,343	1/1:7,2:8:6.02:93,6,0	1/1:5,0:3:1.25:3,1,0	1/1:12,0:10:3:25,3,0	./.	0/0:24,0:24:42.14:0,42,561	0/0:18,0:18:48.16:0,48,631	0/0:37,0:34:78.26:0,78,1037	1/1:4,1:5:3.01:50,3,0	1/1:11,0:11:6.06:40,6,0	0/1:12,0:10:0.25:35,0,0	1/1:2,0:1:0.47:1,0,0
chr10	42508452	.	GTC	G	180.43	PASS	AB=0.889;AC=10;AF=0.200;AN=50;BaseQRankSum=2.745;DP=390;FS=1.421;HRun=0;HaplotypeScore=102.3070;InbreedingCoeff=0.3289;MQ=37.71;MQ0=39;MQRankSum=-3.160;QD=1.54;ReadPosRankSum=-1.618;VQSLOD=2.0235;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:24:0.04:0,0,0	./.	./.	./.	0/0:20,0:18:1.82:0,2,5	0/0:13,0:9:0:0,0,0	0/1:17,0:13:0.07:0,0,0	0/0:10,0:6:14.81:0,15,130	1/1:11,0:9:1.18:3,1,0	0/1:14,4:14:43.08:122,0,43	0/0:8,3:10:2.50:0,2,9	0/0:12,0:11:24.03:0,24,318	0/0:10,0:10:28.94:0,29,384	0/0:18,0:17:33.01:0,33,437	1/1:12,8:18:3.81:40,4,0	0/0:12,0:12:0:0,0,1	0/0:21,0:15:26.81:0,27,365	0/1:9,5:10:34.68:90,0,35	0/0:3,0:3:5.96:0,6,68	0/0:12,0:10:2.52:0,3,10	0/0:17,0:13:3.01:0,3,41	0/0:24,0:23:33.07:0,33,475	0/0:14,0:14:27.89:0,28,396	0/0:44,0:39:72.72:0,73,1189	1/1:3,5:7:3.01:32,3,0	0/0:8,0:8:6.02:0,6,78	0/0:11,0:8:2.22:0,2,7	0/0:5,0:4:3.17:0,3,8
chr10	42508468	.	C	CTG	791.71	PASS	AB=0.901;AC=11;AF=0.212;AN=52;BaseQRankSum=-2.133;DP=401;FS=4.884;HRun=0;HaplotypeScore=84.2268;InbreedingCoeff=0.3348;MQ=37.48;MQ0=45;MQRankSum=-5.223;QD=8.70;ReadPosRankSum=-0.691;VQSLOD=2.9360;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,5:16:3.59:0,4,25	0/0:3,2:5:3.48:0,3,33	./.	./.	0/0:17,0:15:8.09:0,8,44	0/1:12,0:8:0.01:0,0,2	0/0:13,0:9:2.29:0,2,10	1/1:23,0:21:35.58:555,36,0	0/0:12,0:10:0.47:0,0,1	0/0:16,0:13:36.26:0,36,326	0/0:13,0:12:5.79:0,6,37	0/0:10,0:9:6.67:0,7,50	0/0:13,0:12:21.01:0,21,156	0/0:17,0:16:10.23:0,10,104	0/0:20,0:18:14.48:0,14,123	0/0:10,0:10:2.13:0,2,15	0/0:24,0:18:8.77:0,9,172	0/0:15,0:10:14.77:0,15,117	1/1:4,1:4:11.97:128,12,0	0/1:14,2:14:2.02:62,0,2	1/1:13,3:11:3.01:36,3,0	0/0:24,0:23:21.11:0,21,214	0/0:16,0:15:13.19:0,13,101	0/0:50,0:45:46.06:0,46,469	0/0:13,0:11:8.85:0,9,80	0/1:5,0:5:29.70:98,0,30	0/1:3,5:6:13.36:32,0,13	0/1:6,0:4:11.91:21,0,12
chr10	42508491	.	TCA	T	848.13	PASS	AB=0.974;AC=19;AF=0.365;AN=52;BaseQRankSum=3.478;DP=524;FS=2.904;HRun=0;HaplotypeScore=115.2006;InbreedingCoeff=0.3230;MQ=39.25;MQ0=46;MQRankSum=4.004;QD=3.70;ReadPosRankSum=-1.949;VQSLOD=2.2009;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:22:5.99:0,6,49	1/1:8,0:8:7.75:80,8,0	./.	./.	0/0:25,0:23:18.64:0,19,164	1/1:16,0:12:13.32:100,13,0	1/1:16,0:12:11.70:81,12,0	0/0:33,0:30:5.70:0,6,68	1/1:15,0:13:16.11:106,16,0	0/0:31,0:28:55.35:0,55,430	0/0:14,0:13:9.01:0,9,95	0/0:16,0:15:0.01:0,0,91	0/1:18,0:17:33.19:33,0,40	0/0:21,0:20:23.87:0,24,210	1/1:21,2:23:26.82:248,27,0	0/0:16,0:16:11.99:0,12,100	0/1:19,2:15:18.86:54,0,19	0/1:16,1:12:18.29:19,0,18	0/0:11,0:8:11.49:0,11,89	0/0:22,0:22:16.13:0,16,175	0/1:25,1:20:16.02:41,0,16	0/1:22,0:22:0.86:1,0,131	0/1:13,0:11:19.79:20,0,57	0/0:46,0:41:11.23:0,11,216	1/1:19,3:20:11.98:218,12,0	0/0:16,0:16:26.52:0,27,247	0/0:12,0:10:5.50:0,5,55	0/1:8,0:7:20.56:21,0,32
chr10	42508993	.	A	AAC	741.83	PASS	AB=0.852;AC=14;AF=0.269;AN=52;BaseQRankSum=-2.804;DP=578;FS=1.840;HRun=0;HaplotypeScore=116.7611;InbreedingCoeff=0.1971;MQ=62.27;MQ0=19;MQRankSum=1.878;QD=3.88;ReadPosRankSum=-2.998;VQSLOD=2.2929;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:26,3:30:23.11:79,0,23	0/1:9,4:14:75.40:156,0,75	./.	./.	0/0:7,0:12:2.69:0,3,13	0/0:10,0:13:10.74:0,11,49	0/0:16,0:20:11.34:0,11,56	1/1:16,0:16:2.97:20,3,0	0/0:10,0:15:10.42:0,10,54	0/0:9,0:15:14:0,14,66	0/0:12,0:17:11.23:0,11,54	0/0:14,0:15:12.03:0,12,129	0/0:22,0:22:17.84:0,18,164	0/0:14,0:15:11.46:0,11,127	0/0:13,0:20:18.60:0,19,88	0/0:11,0:23:17:0,17,83	0/0:11,0:17:11.83:0,12,57	0/0:12,0:15:11.02:0,11,50	1/1:16,2:18:3.01:44,3,0	0/1:19,4:23:20.11:121,0,20	0/1:25,4:29:45.11:74,0,45	0/0:23,0:26:23.54:0,24,195	0/1:13,0:14:23.64:24,0,116	0/0:32,0:33:38.92:0,39,393	0/0:14,0:15:2.84:0,3,14	0/1:15,1:21:39.34:181,0,39	1/1:9,4:14:12.84:151,13,0	1/1:8,1:10:3.01:44,3,0
chr10	42509443	.	TG	T	6729.37	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=16.792;DP=550;FS=5.958;HRun=8;HaplotypeScore=134.5184;InbreedingCoeff=0.9994;MQ=76.66;MQ0=0;MQRankSum=-7.387;QD=24.56;ReadPosRankSum=1.489;VQSLOD=3.4579;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,18:23:60.05:568,60,0	1/1:1,11:12:33.05:319,33,0	0/0:22,0:22:39.86:0,40,510	0/0:26,0:25:39.25:0,39,510	1/1:8,10:18:50.94:470,51,0	0/0:16,0:16:48.14:0,48,568	0/0:17,0:17:48.15:0,48,577	1/1:4,21:26:66.09:632,66,0	0/0:14,0:14:42.13:0,42,506	1/1:7,19:26:59.99:560,60,0	1/1:3,17:20:50.95:469,51,0	0/0:15,0:15:42.13:0,42,507	0/0:20,0:20:60.18:0,60,719	0/0:24,1:25:40.22:0,40,755	1/1:4,13:17:42.07:405,42,0	0/0:3,0:15:31.69:0,32,182	0/0:7,0:37:83.21:0,83,421	1/1:4,9:13:29.96:271,30,0	1/1:1,8:9:24.04:232,24,0	1/1:7,15:22:48.05:461,48,0	1/1:4,9:13:30.05:289,30,0	0/0:24,0:24:60.11:0,60,693	0/0:24,0:24:60.15:0,60,690	0/0:21,0:21:48.10:0,48,552	1/1:4,15:19:48.07:463,48,0	1/1:1,22:23:69.11:668,69,0	1/1:5,17:21:63.10:605,63,0	1/1:1,10:11:33.05:316,33,0
chr10	42509451	.	GT	G	1242.99	PASS	AB=0.952;AC=20;AF=0.357;AN=56;BaseQRankSum=16.469;DP=557;FS=1.517;HRun=1;HaplotypeScore=156.0872;InbreedingCoeff=0.2120;MQ=70.68;MQ0=0;MQRankSum=-7.251;QD=4.32;ReadPosRankSum=4.446;VQSLOD=0.5248;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:23,3:26:39.13:151,0,39	1/1:12,0:12:5.48:49,5,0	0/0:17,0:17:50.68:0,51,585	0/0:20,0:19:35.32:0,35,586	1/1:13,6:19:16.36:207,16,0	0/0:17,0:17:48.11:0,48,633	0/0:18,0:18:54.14:0,54,710	0/1:28,0:28:56.77:57,0,123	0/0:17,0:17:51.13:0,51,670	0/1:24,1:25:68.96:69,0,86	0/1:21,2:23:0.76:138,0,1	0/0:15,0:15:45.11:0,45,609	0/0:22,0:22:66.19:0,66,887	0/0:26,0:26:69.78:0,70,971	1/1:14,1:15:12.12:124,12,0	0/0:17,0:17:43.08:0,43,305	0/0:35,0:35:93.66:0,94,568	0/1:12,0:12:18.19:23,0,18	0/1:10,0:10:21.19:21,0,27	0/1:21,1:22:35.86:83,0,36	1/1:9,1:10:21.08:84,21,0	0/0:22,0:22:54.91:0,55,810	0/0:24,0:24:66:0,66,817	0/0:19,0:18:47.90:0,48,618	0/1:21,1:22:66.73:71,0,67	0/1:25,1:26:32.82:124,0,33	0/1:22,4:26:24.55:185,0,25	1/1:12,0:12:4.02:39,4,0
chr10	42509503	.	T	TTCAC	14425.28	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=1.315;DP=604;FS=0.000;HRun=0;HaplotypeScore=109.8068;InbreedingCoeff=0.9790;MQ=68.49;MQ0=1;MQRankSum=-4.205;QD=46.23;ReadPosRankSum=1.509;VQSLOD=5.1909;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,25:30:20.71:1125,21,0	1/1:0,6:6:17.95:407,18,0	0/0:25,0:24:44.26:0,44,659	0/0:21,0:20:45.36:0,45,704	1/1:3,16:19:41.98:780,42,0	0/0:20,0:20:57.15:0,57,910	0/0:15,0:15:33.07:0,33,481	1/1:6,21:29:69.17:1281,69,0	0/0:20,0:20:60.05:0,60,1010	1/1:4,29:33:90.28:1969,90,0	1/1:3,25:28:74.74:1386,75,0	0/0:29,0:29:81.22:0,81,1301	0/0:25,0:25:75.20:0,75,1238	0/0:26,0:26:75.20:0,75,1166	1/1:16,8:24:60.07:1037,60,0	0/0:20,0:20:48.09:0,48,714	0/0:22,0:22:63.18:0,63,1063	1/1:5,10:17:21.07:538,21,0	1/1:10,3:13:30.05:451,30,0	1/1:1,23:24:59.83:1216,60,0	1/1:1,8:9:12.04:312,12,0	0/0:24,0:24:72.19:0,72,1166	0/0:27,0:27:81.20:0,81,1260	0/0:18,0:17:51.11:0,51,791	1/1:2,18:20:42.14:1092,42,0	1/1:15,12:27:66.20:1466,66,0	1/1:3,25:30:48.08:1245,48,0	1/1:2,1:3:6.02:119,6,0
chr10	42509774	.	G	GGCTCTAGTT	30826.41	PASS	AC=28;AF=0.519;AN=54;BaseQRankSum=-6.067;DP=606;FS=1.764;HRun=0;HaplotypeScore=157.6804;InbreedingCoeff=0.9975;MQ=94.75;MQ0=0;MQRankSum=-18.061;QD=104.14;ReadPosRankSum=-2.682;VQSLOD=4.7226;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,12:19:48.08:1761,48,0	1/1:1,8:11:26.84:1190,27,0	0/0:40,0:40:99:0,108,2873	0/0:25,0:25:69.20:0,69,1911	1/1:9,7:16:39.09:1476,39,0	0/0:12,0:12:33.11:0,33,1023	0/0:25,0:25:72.19:0,72,2014	1/1:20,11:37:99:3966,99,0	0/0:27,0:27:75.26:0,75,2328	1/1:11,12:26:69.24:2921,69,0	1/1:5,12:18:42.01:1601,42,0	0/0:19,0:19:57.20:0,57,1741	0/0:21,0:21:63.22:0,63,1902	0/0:25,0:25:75.26:0,75,2254	1/1:6,24:33:84.24:3725,84,0	0/0:20,0:20:60.21:0,60,1857	0/0:32,0:32:96.32:0,96,2800	1/1:0,5:8:15.05:668,15,0	1/1:5,5:12:36.12:1290,36,0	1/1:1,17:19:45.07:1728,45,0	1/1:9,8:18:36.12:1620,36,0	0/0:21,0:21:63.19:0,63,1764	0/0:15,0:15:42.14:0,42,1298	0/0:28,0:28:84.28:0,84,2522	1/1:4,14:18:51.13:2209,51,0	1/1:4,9:19:54.17:2026,54,0	1/1:17,20:42:99:4645,108,0	./.
chr10	42510853	.	AACACAC	A	1809.26	PASS	AB=0.902;AC=17;AF=0.327;AN=52;BaseQRankSum=3.827;DP=648;FS=2.901;HRun=0;HaplotypeScore=189.2615;InbreedingCoeff=0.5490;MQ=53.82;MQ0=13;MQRankSum=-5.850;QD=7.35;ReadPosRankSum=-0.494;VQSLOD=2.7649;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:34:27.01:0,27,550	0/0:2,0:2:6:0,6,70	./.	0/0:20,0:11:0:0,0,0	1/1:20,0:35:2.94:43,3,0	1/1:19,0:18:3.15:26,3,0	./.	0/0:35,0:33:21:0,21,292	0/0:17,0:17:3.47:0,3,28	1/1:9,10:21:27.55:455,28,0	1/1:11,7:18:8.98:143,9,0	0/0:21,0:20:36.11:0,36,1004	0/0:32,0:32:54.19:0,54,1564	0/0:22,0:24:33.11:0,33,939	1/1:20,10:33:14.35:228,14,0	1/1:11,0:29:30.10:417,30,0	0/0:10,0:10:5.90:0,6,71	0/1:7,5:12:12.92:13,0,36	0/0:14,0:15:6.91:0,7,116	0/1:20,0:20:75.14:75,0,477	0/0:42,0:41:77.16:0,77,1355	0/0:15,0:16:23.11:0,23,448	0/0:24,0:24:39.13:0,39,1076	0/0:41,0:42:65.41:0,65,1859	1/1:17,14:31:17.55:551,18,0	0/1:28,0:26:33.36:33,0,647	0/0:28,0:28:30.57:0,31,584	0/0:5,0:5:3.01:0,3,59
chr10	42510883	.	C	CATATATAT	315.37	PASS	AB=1.000;AC=10;AF=0.179;AN=56;BaseQRankSum=3.555;DP=609;FS=5.311;HRun=0;HaplotypeScore=222.4668;InbreedingCoeff=0.3597;MQ=53.15;MQ0=16;MQRankSum=-3.031;QD=4.20;ReadPosRankSum=-0.600;VQSLOD=1.9465;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:31:43.80:0,44,1056	0/0:4,0:4:12.01:0,12,262	0/0:31,0:16:42.12:0,42,955	0/0:31,0:14:36.04:0,36,860	0/0:23,0:23:20.90:0,21,309	1/1:10,0:9:2.97:70,3,0	1/1:9,0:9:3.01:71,3,0	0/0:29,0:27:71.55:0,72,1102	1/1:6,6:12:5.51:133,6,0	0/1:18,0:18:17.06:17,0,902	0/0:18,0:18:30.01:0,30,685	0/0:25,0:24:69.17:0,69,1867	0/0:23,0:23:69.22:0,69,1877	0/0:22,0:22:66.20:0,66,1608	0/0:23,0:23:44.82:0,45,1036	0/0:28,0:28:21.15:0,21,931	0/1:5,0:4:19.27:119,0,19	0/1:17,0:17:34.09:34,0,488	0/0:14,0:13:36.06:0,36,579	0/0:22,0:22:12.52:0,13,1320	0/0:50,0:48:99:0,123,3100	0/0:12,0:12:30.10:0,30,755	0/0:19,0:19:54.17:0,54,1484	0/0:47,0:47:99:0,102,2719	0/0:31,0:31:20.89:0,21,1376	0/0:23,0:23:65.96:0,66,1571	0/0:27,0:26:69.97:0,70,1509	0/1:4,0:4:9.72:10,0,163
chr10	42511409	.	T	TTCTCTC	10280.93	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=-0.496;DP=507;FS=14.217;HRun=0;HaplotypeScore=149.2714;InbreedingCoeff=0.8922;MQ=63.41;MQ0=13;MQRankSum=-5.142;QD=34.50;ReadPosRankSum=-3.350;VQSLOD=3.1033;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:22:35.91:662,36,0	0/0:5,0:5:13.86:0,14,159	0/0:21,0:12:17.90:0,18,218	0/0:22,0:13:23.42:0,23,456	0/1:24,0:29:6.03:222,0,6	0/0:26,0:26:51.15:0,51,758	0/0:15,0:15:24.38:0,24,310	1/1:32,0:32:81.10:1317,81,0	0/0:15,0:15:33.58:0,34,495	1/1:17,0:17:38.97:699,39,0	1/1:14,0:14:6.90:112,7,0	0/0:13,0:13:36.12:0,36,777	0/0:15,0:15:42.11:0,42,867	0/0:12,0:12:30.10:0,30,670	1/1:14,0:15:30.52:589,31,0	1/1:16,0:20:17.66:198,18,0	0/0:11,0:11:18.06:0,18,239	1/1:2,0:3:6.02:93,6,0	1/1:15,0:13:33.07:807,33,0	1/1:17,6:20:51.13:1112,51,0	1/1:11,1:13:14.97:346,15,0	0/0:15,0:15:45.11:0,45,815	0/0:17,0:17:51.15:0,51,1003	0/0:21,0:21:57.16:0,57,1095	1/1:13,0:13:6.02:156,6,0	1/1:9,9:21:60.19:1686,60,0	1/1:19,7:29:66.12:1642,66,0	1/1:4,4:9:21.07:639,21,0
chr10	42511411	.	C	CTCTCTCTCTCTCTA	9147.55	PASS	AB=0.823;AC=30;AF=0.536;AN=56;BaseQRankSum=0.356;DP=521;FS=8.811;HRun=0;HaplotypeScore=227.6227;InbreedingCoeff=0.7756;MQ=60.21;MQ0=13;MQRankSum=-5.819;QD=27.72;ReadPosRankSum=-2.379;VQSLOD=2.3656;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:21:19.41:244,19,0	0/0:5,0:5:13.86:0,14,383	0/0:21,0:10:6.30:0,6,248	0/0:21,0:12:30.94:0,31,538	0/1:14,0:30:99:259,0,164	0/0:26,0:26:26.95:0,27,1104	0/1:16,0:16:26.45:26,0,469	1/1:37,0:29:60.32:913,60,0	0/0:15,0:15:12.60:0,13,792	1/1:0,12:23:57.12:1773,57,0	1/1:1,9:18:4.47:305,4,0	0/0:13,0:13:36.12:0,36,1195	0/0:15,0:15:42.14:0,42,1488	0/0:12,0:12:33.10:0,33,1174	1/1:16,3:17:39.08:1254,39,0	1/1:15,0:23:30.44:861,30,0	0/0:10,0:10:18.06:0,18,371	1/1:3,0:3:6.02:161,6,0	1/1:14,0:13:36.08:764,36,0	1/1:23,0:20:16.06:421,16,0	1/1:14,0:13:8.42:96,8,0	0/0:15,0:15:45.14:0,45,1277	0/0:17,0:17:51.16:0,51,1562	0/0:20,0:21:60.19:0,60,1844	1/1:2,10:19:6.02:420,6,0	1/1:23,0:20:50.90:625,51,0	1/1:30,0:28:32.52:753,33,0	1/1:9,0:9:20.98:273,21,0
chr10	42511413	.	CTA	C	1529.71	PASS	AB=0.890;AC=17;AF=0.304;AN=56;BaseQRankSum=0.391;DP=517;FS=4.794;HRun=0;HaplotypeScore=154.8832;InbreedingCoeff=-0.1376;MQ=61.06;MQ0=13;MQRankSum=-1.420;QD=5.08;ReadPosRankSum=-0.275;VQSLOD=2.9123;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:18,5:22:62.43:163,0,62	1/1:1,4:5:15.05:229,15,0	0/0:22,0:11:20.18:0,20,234	0/0:21,0:12:28.13:0,28,425	0/1:33,0:32:84.01:84,0,119	0/0:26,0:26:47.46:0,47,530	0/0:16,0:16:26.87:0,27,263	0/1:24,12:28:99:421,0,235	0/0:14,0:14:36.06:0,36,394	0/1:18,0:18:61.02:61,0,66	0/1:14,0:14:10.59:11,0,19	0/0:12,0:12:36.12:0,36,644	0/0:15,0:15:42.14:0,42,777	0/0:12,0:12:33.11:0,33,587	0/1:16,4:18:53.33:98,0,53	0/1:23,1:23:13.06:13,0,67	0/0:10,0:10:17.81:0,18,145	0/1:3,0:3:7.51:34,0,8	0/1:12,6:14:97.36:179,0,97	0/1:21,4:22:99:102,0,328	0/0:11,2:12:14.26:0,14,163	0/0:16,0:16:48.15:0,48,790	0/0:17,0:17:51.17:0,51,830	0/0:22,0:22:52.73:0,53,958	1/1:19,0:17:0.73:6,1,0	0/1:21,2:20:99:125,0,318	0/1:26,5:29:99:107,0,507	0/1:7,2:9:58.41:58,0,80
chr10	42511445	.	C	CTA	635.50	PASS	AB=0.978;AC=11;AF=0.196;AN=56;BaseQRankSum=8.397;DP=520;FS=11.148;HRun=0;HaplotypeScore=173.1082;InbreedingCoeff=-0.2719;MQ=52.17;MQ0=10;MQRankSum=-6.396;QD=2.93;ReadPosRankSum=-3.761;VQSLOD=1.0439;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:22:99:152,0,142	0/0:10,0:10:30.04:0,30,323	0/0:28,0:5:4.79:0,5,51	0/0:15,0:6:14.92:0,15,209	0/1:22,10:32:40.33:161,0,40	0/0:23,0:23:36.77:0,37,480	0/0:14,0:14:2.53:0,3,199	0/0:28,0:28:13.39:0,13,642	0/0:17,0:17:33.25:0,33,277	0/1:17,0:17:28.78:29,0,422	0/1:16,0:16:27.19:27,0,225	0/0:14,0:14:39.02:0,39,538	0/0:16,0:16:45.15:0,45,680	0/0:14,0:14:42.14:0,42,639	0/1:21,0:21:77.52:78,0,292	0/0:22,0:21:20.69:0,21,243	0/0:10,0:10:15.91:0,16,105	0/0:3,0:3:3.12:0,3,79	0/1:15,0:14:83.94:84,0,135	0/0:38,0:36:15.37:0,15,663	0/1:14,0:14:16.94:17,0,210	0/0:13,0:13:39.12:0,39,572	0/0:15,0:15:45.14:0,45,660	0/0:22,0:22:60.19:0,60,891	0/1:16,0:16:20.52:21,0,175	0/1:27,0:27:46.32:46,0,369	0/1:31,0:31:99:114,0,482	0/1:6,0:6:19.52:54,0,20
chr10	42511448	.	TC	T	2025.61	PASS	AB=1.000;AC=18;AF=0.321;AN=56;BaseQRankSum=3.370;DP=522;FS=19.197;HRun=7;HaplotypeScore=160.4901;InbreedingCoeff=0.7611;MQ=54.14;MQ0=10;MQRankSum=2.277;QD=9.12;ReadPosRankSum=1.769;VQSLOD=0.5068;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:21,0:21:11.59:117,0,12	1/1:10,0:10:26.16:156,26,0	0/0:26,2:5:7.42:0,7,48	0/0:16,0:7:15:0,15,158	1/1:18,14:32:41.84:421,42,0	0/0:23,0:24:30.89:0,31,251	0/0:13,0:14:17.82:0,18,134	0/1:26,0:26:50.83:100,0,51	0/0:14,0:15:30.17:0,30,194	0/0:17,0:17:46.50:0,46,559	0/0:17,0:17:22.14:0,22,250	0/0:14,0:14:30.97:0,31,366	0/0:15,1:16:42.13:0,42,527	0/0:14,0:14:42.13:0,42,524	0/0:20,0:20:43.99:0,44,460	0/0:22,0:21:32.47:0,32,331	0/0:10,0:10:16.09:0,16,112	0/0:3,0:3:9.03:0,9,113	1/1:12,0:12:0.40:75,0,0	1/1:42,0:42:82.31:494,82,0	1/1:13,0:13:26.64:149,27,0	0/0:13,0:13:39.10:0,39,476	0/0:17,0:17:48.11:0,48,581	0/0:22,0:22:56.87:0,57,690	0/0:18,0:18:26.94:0,27,255	1/1:27,0:27:23.78:278,24,0	1/1:32,0:32:64.23:378,64,0	1/1:7,0:7:8.15:56,8,0
chr10	42511455	.	CT	C	5745.57	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=2.860;DP=489;FS=25.148;HRun=1;HaplotypeScore=133.0970;InbreedingCoeff=0.9642;MQ=58.32;MQ0=7;MQRankSum=0.318;QD=28.03;ReadPosRankSum=-1.164;VQSLOD=2.8455;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,18:19:49.31:490,49,0	1/1:1,8:9:27.09:368,27,0	0/0:24,0:6:8.09:0,8,90	0/0:15,0:7:17.58:0,18,205	1/1:29,0:29:28.15:98,28,0	0/0:20,0:20:32.50:0,32,240	0/0:9,0:9:26.22:0,26,150	1/1:0,23:23:57.05:627,57,0	0/0:10,0:10:23.67:0,24,159	0/0:19,0:19:56.99:0,57,719	0/0:18,0:18:8.88:0,9,282	0/0:12,0:12:29.37:0,29,403	0/0:16,0:16:45.13:0,45,614	0/0:15,0:15:45.12:0,45,582	0/0:20,0:20:49.06:0,49,627	0/0:19,0:19:30.60:0,31,421	0/0:10,0:10:20.97:0,21,226	0/0:4,0:4:9.03:0,9,131	1/1:0,12:12:30.03:340,30,0	1/1:1,43:44:99:1417,120,0	1/1:1,10:11:27.56:377,28,0	0/0:14,0:14:39.13:0,39,567	0/0:19,0:19:51.08:0,51,706	0/0:20,0:20:56.91:0,57,798	0/0:19,0:19:23.97:0,24,307	1/1:0,26:26:78.16:973,78,0	1/1:0,27:27:66.22:911,66,0	1/1:1,4:5:12.01:145,12,0
chr10	42511499	.	C	CATATAT	482.39	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=4.493;DP=502;FS=1.893;HRun=0;HaplotypeScore=178.7616;InbreedingCoeff=0.2734;MQ=57.10;MQ0=5;MQRankSum=-4.814;QD=8.77;ReadPosRankSum=-0.157;VQSLOD=2.9315;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:45.15:0,45,1009	0/0:8,0:8:24.07:0,24,494	0/0:10,0:2:3.01:0,3,63	0/0:25,0:8:11.18:0,11,59	0/0:33,0:33:50.26:0,50,688	0/1:23,0:23:61.46:63,0,61	0/1:9,0:9:10.86:41,0,11	0/0:43,0:43:96.27:0,96,1857	0/1:10,0:10:20.97:83,0,21	0/0:22,0:22:59:0,59,912	0/0:19,0:20:51.07:0,51,760	0/0:7,0:7:18.06:0,18,407	0/0:11,0:11:27.08:0,27,544	0/0:10,0:10:30.09:0,30,625	0/0:27,0:27:63.17:0,63,993	0/0:13,0:13:21.01:0,21,368	1/1:0,11:13:12.04:414,12,0	0/0:5,0:5:12.04:0,12,191	0/0:17,0:16:42.12:0,42,861	0/0:43,0:43:99:0,108,2372	0/0:16,0:16:33.06:0,33,695	0/0:9,0:9:21.05:0,21,413	0/0:10,0:10:24.08:0,24,543	0/0:13,0:13:27.09:0,27,574	0/0:15,0:15:39.12:0,39,625	0/0:35,0:34:89.98:0,90,1905	0/0:28,0:28:66.16:0,66,1239	0/0:4,0:4:3.01:0,3,68
chr10	42511503	.	TATAC	T	3619.50	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-2.976;DP=508;FS=3.663;HRun=0;HaplotypeScore=147.9804;InbreedingCoeff=0.8923;MQ=58.51;MQ0=7;MQRankSum=0.180;QD=29.67;ReadPosRankSum=1.133;VQSLOD=3.3298;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:47.53:0,48,1084	0/0:8,0:8:21.06:0,21,473	0/0:13,0:3:5.95:0,6,59	0/0:33,0:11:0.87:0,1,29	1/1:12,20:32:27.25:387,27,0	0/0:23,0:23:27.15:0,27,88	0/0:10,0:10:9.03:0,9,30	0/0:45,0:45:96.29:0,96,1966	0/0:10,0:10:13.25:0,13,43	1/1:7,15:22:54.18:899,54,0	1/1:12,9:21:39.10:623,39,0	0/0:7,0:7:21.07:0,21,498	0/0:11,0:11:27.09:0,27,639	0/0:10,0:10:24.08:0,24,599	1/1:5,21:26:51.17:833,51,0	0/0:11,0:11:18.06:0,18,401	0/0:13,0:13:15.52:0,16,255	1/1:1,4:5:12.04:204,12,0	0/0:17,0:16:45.15:0,45,1030	0/0:40,0:40:99:0,102,2351	0/0:15,0:15:29.42:0,29,717	0/0:7,0:7:18.06:0,18,421	0/0:9,0:9:27.08:0,27,615	0/0:12,0:12:21.07:0,21,524	1/1:4,12:16:42.14:674,42,0	0/0:35,1:35:42.38:0,42,1925	0/0:28,0:28:48.16:0,48,1098	0/0:4,0:4:9.03:0,9,169
chr10	42511505	.	TAC	T	1400.80	PASS	AB=1.000;AC=14;AF=0.250;AN=56;BaseQRankSum=8.878;DP=508;FS=35.440;HRun=0;HaplotypeScore=138.7213;InbreedingCoeff=0.5538;MQ=59.01;MQ0=8;MQRankSum=-1.097;QD=8.59;ReadPosRankSum=2.931;VQSLOD=1.5741;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:47.19:0,47,872	0/0:8,0:8:24.08:0,24,444	0/0:18,0:4:6.02:0,6,87	0/0:38,0:12:4.30:0,4,87	0/1:32,0:32:31.07:31,0,279	1/1:2,21:23:39.59:536,40,0	1/1:4,6:10:12.04:171,12,0	0/0:45,0:45:99:0,129,2029	1/1:3,7:10:20.10:294,20,0	0/1:21,0:21:26.12:161,0,26	0/1:22,0:22:99:114,0,121	0/0:7,0:7:21.05:0,21,371	0/0:10,0:10:27.09:0,27,520	0/0:10,0:10:30.10:0,30,542	0/1:25,0:25:99:108,0,113	0/0:11,0:11:21.07:0,21,386	0/0:12,0:12:14.53:0,15,111	1/1:5,0:5:10.71:44,11,0	0/0:17,0:16:45.14:0,45,835	0/0:39,0:39:99:0,111,2074	0/0:14,0:14:33.11:0,33,618	0/0:7,0:7:21.07:0,21,387	0/0:9,0:9:27.08:0,27,488	0/0:12,0:12:30.08:0,30,503	1/1:15,0:15:26.31:122,26,0	0/0:36,0:35:91.44:0,91,1745	0/0:27,0:27:69.19:0,69,1157	0/0:4,0:4:9.03:0,9,150
chr10	42511530	.	CAT	C	7059.08	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=-0.039;DP=520;FS=5.211;HRun=0;HaplotypeScore=117.0199;InbreedingCoeff=0.9111;MQ=63.64;MQ0=10;MQRankSum=-3.005;QD=22.20;ReadPosRankSum=-1.331;VQSLOD=4.6674;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,12:17:39.12:481,39,0	1/1:3,5:8:21.05:253,21,0	0/1:23,0:6:1.16:1,0,5	0/0:51,0:20:20.01:0,20,169	1/1:7,26:33:54.25:641,54,0	1/1:5,24:29:63.57:734,64,0	1/1:3,4:7:6:56,6,0	1/1:11,34:45:55.08:1204,55,0	1/1:4,5:9:15.05:191,15,0	0/0:23,0:23:60.03:0,60,942	0/0:18,1:19:45.15:0,45,746	0/0:7,0:7:15.02:0,15,222	0/0:11,0:11:27.09:0,27,444	0/0:11,0:11:27.08:0,27,408	0/0:23,0:23:48.16:0,48,799	1/1:3,12:15:24.08:305,24,0	0/0:12,0:12:8.92:0,9,150	0/0:6,0:6:18.06:0,18,284	1/1:11,9:20:45.13:555,45,0	1/1:16,15:31:51.16:648,51,0	1/1:4,7:9:12.04:153,12,0	0/0:3,0:3:9.02:0,9,122	0/0:14,0:14:33.10:0,33,510	0/0:6,0:6:9.03:0,9,151	0/0:15,0:15:35.48:0,35,552	1/1:18,20:36:33.99:937,34,0	1/1:10,16:25:60.17:747,60,0	1/1:1,4:5:12.04:152,12,0
chr10	42512980	.	T	TG	1392.44	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=11.330;DP=620;FS=3.231;HRun=2;HaplotypeScore=64.3303;InbreedingCoeff=0.8958;MQ=69.30;MQ0=0;MQRankSum=-1.696;QD=15.82;ReadPosRankSum=2.968;VQSLOD=3.8101;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:78.08:0,78,886	0/0:13,0:13:36.01:0,36,405	0/0:19,0:18:48.11:0,48,554	0/1:13,0:13:4.72:5,0,302	0/0:35,0:35:99:0,99,1213	1/1:30,1:31:50.99:456,51,0	1/1:11,0:11:17.99:153,18,0	0/0:39,0:39:99:0,114,1340	1/1:16,0:16:38.98:336,39,0	0/0:26,0:26:75.23:0,75,921	0/0:25,0:25:75.18:0,75,873	0/0:19,0:19:57.18:0,57,704	0/0:20,0:20:57.13:0,57,655	0/0:26,0:26:75.18:0,75,868	0/0:19,0:19:57.17:0,57,693	0/0:19,0:19:56.41:0,56,381	1/1:1,16:17:42.14:604,42,0	0/0:18,0:18:32.52:0,33,496	0/0:16,0:16:45.13:0,45,534	0/0:36,0:36:99:0,105,1198	0/0:21,0:21:63.07:0,63,734	0/0:24,0:24:69.19:0,69,821	0/0:24,0:24:72.16:0,72,846	0/0:16,0:16:45.13:0,45,545	0/0:25,0:25:64.72:0,65,774	0/0:32,0:32:96.28:0,96,1159	0/0:25,0:24:72.20:0,72,869	0/0:9,0:9:24.04:0,24,269
chr10	42512982	.	G	GGA	2232.16	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=10.184;DP=633;FS=1.098;HRun=0;HaplotypeScore=75.7313;InbreedingCoeff=0.9947;MQ=71.85;MQ0=0;MQRankSum=-3.939;QD=28.62;ReadPosRankSum=2.891;VQSLOD=4.9475;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:84.06:0,84,1189	0/0:12,0:12:36.02:0,36,508	0/0:22,0:20:51.12:0,51,708	0/0:14,0:14:21.65:0,22,390	0/0:34,0:34:99:0,99,1568	1/1:2,29:33:54.08:1016,54,0	1/1:0,10:11:18.06:361,18,0	0/0:40,0:40:99:0,120,1745	1/1:2,14:17:42.14:819,42,0	0/0:27,0:27:75.24:0,75,1199	0/0:26,0:26:75.21:0,75,1123	0/0:20,0:20:57.19:0,57,917	0/0:20,0:20:57.14:0,57,824	0/0:25,0:25:75.22:0,75,1137	0/0:19,0:19:57.18:0,57,900	0/0:1,0:19:57.03:0,57,506	1/1:17,0:17:20:196,20,0	0/0:17,0:17:51.07:0,51,755	0/0:16,0:16:48.14:0,48,725	0/0:36,0:36:99:0,108,1564	0/0:24,0:24:69.05:0,69,979	0/0:24,0:24:69.20:0,69,1045	0/0:26,0:26:75.19:0,75,1125	0/0:16,0:16:45.14:0,45,705	0/0:23,0:24:70.41:0,70,999	0/0:32,0:32:96.31:0,96,1512	0/0:25,0:24:75.22:0,75,1147	0/0:8,0:8:24.04:0,24,338
chr10	42513084	.	GA	G	2115.76	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.884;DP=674;FS=0.000;HRun=2;HaplotypeScore=88.7134;InbreedingCoeff=0.9971;MQ=77.81;MQ0=0;MQRankSum=-3.195;QD=32.55;ReadPosRankSum=0.610;VQSLOD=3.3567;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:75.21:0,75,1064	0/0:13,0:13:39.12:0,39,566	0/0:30,0:30:90.11:0,90,1238	0/0:27,0:27:69.20:0,69,998	0/0:25,0:25:72.24:0,72,1077	1/1:0,27:27:72.23:935,72,0	1/1:0,19:19:54.18:701,54,0	0/0:33,0:33:99:0,99,1415	1/1:0,19:19:48.16:623,48,0	0/0:35,0:35:99:0,99,1464	0/0:26,0:26:75.22:0,75,1067	0/0:19,0:19:57.19:0,57,854	0/0:23,0:23:69.23:0,69,1031	0/0:33,0:33:99:0,99,1464	0/0:15,0:15:45.15:0,45,675	0/0:21,0:21:60.20:0,60,897	0/0:23,0:23:69.19:0,69,1009	0/0:13,0:13:39.08:0,39,556	0/0:22,0:22:63.20:0,63,926	0/0:30,0:30:90.28:0,90,1309	0/0:20,0:20:60.19:0,60,878	0/0:27,0:27:81.27:0,81,1195	0/0:19,0:19:54.17:0,54,791	0/0:27,0:27:81.25:0,81,1174	0/0:25,0:25:75.21:0,75,1098	0/0:35,0:35:99:0,99,1468	0/0:36,0:36:99:0,108,1574	0/0:7,0:7:18.05:0,18,250
chr10	42516386	.	TGG	T	10725.20	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=16.444;DP=680;FS=0.000;HRun=2;HaplotypeScore=123.3084;InbreedingCoeff=0.9735;MQ=64.41;MQ0=2;MQRankSum=0.738;QD=22.30;ReadPosRankSum=3.279;VQSLOD=3.2237;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:54,0:53:99:1211,130,0	1/1:17,0:17:25.93:375,26,0	0/0:16,0:14:21.26:0,21,727	0/0:14,0:11:32.55:0,33,461	0/0:23,0:23:69.24:0,69,1370	1/1:23,0:22:56.89:465,57,0	1/1:21,0:21:6.90:333,7,0	1/1:36,0:36:62.07:570,62,0	1/1:20,0:20:53.89:443,54,0	1/1:22,0:22:65.47:480,65,0	1/1:22,0:22:7.95:373,8,0	0/0:29,0:29:87.27:0,87,1684	0/0:25,0:25:75.26:0,75,1524	0/0:20,0:20:60.21:0,60,1207	1/1:32,0:32:83.81:674,84,0	1/1:26,0:26:71.85:582,72,0	1/1:0,24:24:72.25:1174,72,0	1/1:13,0:13:38.94:330,39,0	1/1:24,0:23:42.10:439,42,0	1/1:36,0:36:98.81:811,99,0	1/1:26,0:26:68.86:559,69,0	0/0:23,0:23:69.24:0,69,1382	0/0:25,0:25:72.25:0,72,1462	0/0:24,0:24:72.25:0,72,1463	1/1:17,0:17:50.87:404,51,0	1/1:33,0:33:95.44:710,95,0	1/1:26,0:26:74.88:624,75,0	1/1:9,0:9:20.96:170,21,0
chr10	42516387	.	GGA	G	20771.76	PASS	AB=0.941;AC=39;AF=0.696;AN=56;BaseQRankSum=10.917;DP=667;FS=1.007;HRun=0;HaplotypeScore=86.4776;InbreedingCoeff=0.9274;MQ=64.68;MQ0=2;MQRankSum=1.164;QD=42.83;ReadPosRankSum=1.611;VQSLOD=6.3140;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,52:51:99:2446,151,0	1/1:0,16:16:48.16:783,48,0	0/1:15,1:14:7.71:8,0,645	0/0:14,0:11:33.08:0,33,544	0/0:23,0:23:69.21:0,69,1330	1/1:1,22:22:57.19:930,57,0	1/1:0,18:18:48.16:783,48,0	1/1:0,35:35:99:1521,105,0	1/1:0,20:20:54.18:881,54,0	1/1:0,22:22:66.23:1076,66,0	1/1:0,20:20:51.17:832,51,0	0/0:28,0:28:84.29:0,84,1690	0/0:25,0:25:75.26:0,75,1523	0/0:20,0:20:60.21:0,60,1216	1/1:0,32:32:84.29:1370,84,0	1/1:0,26:26:72.25:1174,72,0	1/1:24,0:24:71.87:589,72,0	1/1:0,13:13:39.13:636,39,0	1/1:0,23:22:66.21:1050,66,0	1/1:0,35:35:99:1614,99,0	1/1:0,26:26:69.24:1125,69,0	0/0:23,0:23:69.23:0,69,1353	0/0:25,0:25:72.25:0,72,1462	0/0:24,0:24:72.25:0,72,1463	1/1:0,17:17:51.17:832,51,0	1/1:0,32:32:96.33:1563,96,0	1/1:0,26:26:75.26:1217,75,0	1/1:0,9:9:21.07:343,21,0
chr10	42518724	.	CT	C	1221.97	PASS	AB=0.917;AC=9;AF=0.161;AN=56;BaseQRankSum=-0.270;DP=627;FS=0.946;HRun=11;HaplotypeScore=105.5806;InbreedingCoeff=0.8153;MQ=66.38;MQ0=3;MQRankSum=-0.355;QD=11.31;ReadPosRankSum=0.120;VQSLOD=3.1721;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,1:29:37.24:0,37,627	1/1:2,6:9:23.01:178,23,0	0/0:33,0:15:16.48:0,16,136	0/0:25,0:14:13.25:0,13,139	0/1:30,3:33:19.74:20,0,419	1/1:3,16:19:44.94:369,45,0	1/1:4,21:25:56.93:468,57,0	0/0:27,1:30:21.42:0,21,467	1/1:3,18:22:43.98:351,44,0	0/0:20,1:21:36.39:0,36,571	0/0:18,0:18:42.07:0,42,436	0/0:13,0:13:27.06:0,27,282	0/0:13,1:14:14.44:0,14,350	0/0:11,0:11:18.35:0,18,175	0/0:18,1:19:17.45:0,17,384	0/0:18,0:18:45.10:0,45,468	0/0:31,1:32:53.05:0,53,750	0/0:13,0:13:30.03:0,30,301	0/0:28,0:29:59.92:0,60,597	0/0:32,0:32:72.02:0,72,731	0/0:13,0:13:30.04:0,30,308	0/0:23,1:24:51.69:0,52,628	0/0:27,2:29:7.88:0,8,549	0/0:17,0:17:42.09:0,42,434	0/0:19,1:20:8.39:0,8,282	0/0:27,0:27:60.88:0,61,654	0/0:28,1:29:13.48:0,13,529	0/0:23,0:23:41.43:0,41,390
chr10	42518740	.	CT	C	5431.88	PASS	AB=0.796;AC=33;AF=0.589;AN=56;BaseQRankSum=2.271;DP=614;FS=3.423;HRun=11;HaplotypeScore=82.9552;InbreedingCoeff=0.7454;MQ=59.60;MQ0=8;MQRankSum=-0.700;QD=13.45;ReadPosRankSum=1.714;VQSLOD=5.2824;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,21:29:56.87:468,57,0	0/0:7,0:10:20.50:0,20,140	0/0:31,1:10:3.68:0,4,58	0/0:22,0:11:6.60:0,7,63	1/1:8,21:29:42.39:345,42,0	0/0:18,1:19:20.43:0,20,402	0/0:30,1:30:38.44:0,38,582	1/1:12,20:31:59.85:489,60,0	0/1:19,2:22:1.39:1,0,342	1/1:6,16:22:45.07:390,45,0	0/1:5,15:20:19.04:275,0,19	0/0:11,1:12:5.43:0,5,263	0/0:17,0:18:41.96:0,42,423	0/1:8,1:9:3.59:4,0,170	1/1:3,14:16:26.96:222,27,0	1/1:5,11:17:34.91:276,35,0	1/1:10,26:37:73.86:590,74,0	1/1:5,10:14:26.93:221,27,0	1/1:9,17:26:44.90:367,45,0	1/1:5,20:25:44.89:369,45,0	1/1:1,8:10:23.01:178,23,0	0/0:19,2:21:11.43:0,11,319	0/0:26,0:26:51.07:0,51,525	0/0:18,0:18:48.04:0,48,489	1/1:6,18:25:34.80:276,35,0	1/1:10,16:27:49.90:391,50,0	1/1:6,22:28:1.94:429,2,0	1/1:9,5:14:17.91:141,18,0
chr10	42519161	.	T	TTC	1650.08	PASS	AB=0.987;AC=43;AF=0.860;AN=50;BaseQRankSum=1.468;DP=619;FS=3.523;HRun=0;HaplotypeScore=136.2088;InbreedingCoeff=0.1357;MQ=68.02;MQ0=4;MQRankSum=-1.945;QD=2.92;ReadPosRankSum=-0.536;VQSLOD=2.3198;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:20:2.99:24,3,0	0/0:2,0:4:2.84:0,3,14	1/1:31,0:28:0.47:1,0,0	0/1:27,0:20:0:0,0,0	1/1:22,0:23:14.96:119,15,0	0/1:22,0:22:36.84:37,0,57	1/1:20,0:20:5.98:47,6,0	1/1:43,0:41:23.09:145,23,0	0/1:19,0:19:16.18:16,0,72	1/1:30,1:30:8.37:199,8,0	1/1:15,0:15:5.87:40,6,0	1/1:20,0:19:9.33:64,9,0	1/1:21,1:21:13.26:101,13,0	0/1:18,0:16:1.05:45,0,1	1/1:24,3:26:8.86:59,9,0	1/1:19,0:19:17.03:136,17,0	1/1:16,1:17:15.17:181,15,0	1/1:12,0:11:5.99:50,6,0	1/1:29,0:29:3.44:21,3,0	./.	./.	1/1:23,0:23:16.22:125,16,0	1/1:19,0:19:11.98:98,12,0	./.	1/1:34,0:34:8.94:68,9,0	1/1:22,0:22:9.02:57,9,0	0/1:27,0:27:2.45:90,0,2	1/1:21,0:21:7.27:37,7,0
chr10	42519201	.	CTGTGTGTGTGTG	C	1934	PASS	AB=0.829;AC=12;AF=0.273;AN=44;BaseQRankSum=-3.208;DP=447;FS=6.542;HRun=0;HaplotypeScore=147.3781;InbreedingCoeff=-0.0820;MQ=34.30;MQ0=42;MQRankSum=-3.624;QD=8.87;ReadPosRankSum=-2.033;VQSLOD=1.8775;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:4,0:3:2.22:0,2,7	./.	./.	0/0:15,0:14:21.04:0,21,854	0/0:21,0:21:6.76:0,7,146	0/0:23,0:16:11.69:0,12,231	0/1:23,2:20:18.38:331,0,18	0/0:19,0:20:24.55:0,25,507	0/1:25,0:20:37.76:38,0,735	0/0:10,0:10:5.97:0,6,119	0/1:20,0:21:19.78:20,0,123	0/1:15,0:16:99:105,0,121	0/1:11,0:12:21.46:21,0,145	0/1:25,0:22:0:0,0,0	0/1:13,0:16:68.50:76,0,68	0/0:20,0:21:30.57:0,31,878	0/0:9,0:7:12.04:0,12,247	0/1:7,4:11:1.77:609,0,2	./.	./.	0/0:17,0:17:14.71:0,15,196	0/0:11,0:10:3.44:0,3,22	./.	0/0:17,0:16:5.93:0,6,120	0/1:10,7:14:99:272,0,160	0/1:16,2:16:66.48:195,0,66	1/1:6,5:11:14.98:399,15,0
chr10	42519241	.	GTC	G	30.95	PASS	AB=0.818;AC=4;AF=0.077;AN=52;BaseQRankSum=3.132;DP=454;FS=5.571;HRun=0;HaplotypeScore=119.9027;InbreedingCoeff=0.1100;MQ=38.32;MQ0=52;MQRankSum=-3.489;QD=0.94;ReadPosRankSum=0.182;VQSLOD=2.1054;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:11:5.16:0,5,105	0/0:3,0:2:3.01:0,3,36	./.	0/0:9,0:2:3.01:0,3,43	0/0:15,0:11:24.05:0,24,377	0/0:19,0:18:15.94:0,16,268	0/0:20,0:13:24.08:0,24,424	0/0:31,0:21:57.38:0,57,943	0/0:26,0:26:17.65:0,18,318	0/1:18,2:12:49.03:79,0,49	0/0:4,0:4:3.01:0,3,52	0/0:26,0:22:12.04:0,12,170	0/0:16,0:13:18.58:0,19,318	0/0:25,0:23:12.89:0,13,177	0/0:11,4:14:0:0,0,0	0/0:25,0:17:24.02:0,24,344	0/0:22,0:21:54.14:0,54,822	0/1:5,3:6:38.40:38,0,56	0/0:24,0:19:52.24:0,52,715	0/0:20,0:19:21.07:0,21,373	0/0:19,0:16:8.81:0,9,159	./.	0/0:10,0:8:2.70:0,3,53	0/0:18,0:17:2.71:0,3,52	1/1:3,2:5:0.47:1,0,0	0/0:18,0:14:26.88:0,27,387	0/0:19,0:18:27.26:0,27,431	0/0:12,0:11:23.81:0,24,336
chr10	42519261	.	GTC	G	2700.91	PASS	AB=0.919;AC=26;AF=0.464;AN=56;BaseQRankSum=-1.599;DP=502;FS=5.103;HRun=0;HaplotypeScore=122.2338;InbreedingCoeff=0.3421;MQ=38.87;MQ0=39;MQRankSum=-3.493;QD=9.28;ReadPosRankSum=2.242;VQSLOD=2.7623;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,6:13:5.86:82,6,0	0/0:3,0:2:3.01:0,3,37	0/0:19,0:2:5.75:0,6,52	0/0:37,0:3:8.05:0,8,70	0/1:14,0:12:9.57:95,0,10	0/0:19,0:18:14.84:0,15,124	0/1:20,0:18:14.23:14,0,80	1/1:16,22:32:69.41:718,69,0	0/0:31,0:31:0.52:0,1,83	0/1:9,1:7:27.50:38,0,28	0/0:6,0:6:5.95:0,6,43	0/1:24,0:22:5.91:6,0,60	0/1:17,0:15:17.12:17,0,58	0/0:22,0:22:3.15:0,3,31	0/0:11,1:13:0:0,0,0	1/1:15,7:14:23.79:275,24,0	0/0:26,0:25:24.46:0,24,175	0/1:7,0:7:5.62:6,0,48	1/1:5,16:19:29.09:468,29,0	1/1:7,16:22:20.97:253,21,0	1/1:6,8:13:8.68:123,9,0	0/1:15,0:13:0:0,0,0	0/0:14,0:12:3.01:0,3,36	0/0:20,0:19:2.64:0,3,35	0/1:3,1:6:0.03:0,0,0	1/1:5,8:11:24.04:289,24,0	1/1:6,11:17:27.39:309,27,0	1/1:5,8:11:18.83:177,19,0
chr10	42519267	.	CTG	C	1464.24	PASS	AB=0.985;AC=29;AF=0.518;AN=56;BaseQRankSum=2.123;DP=521;FS=11.079;HRun=0;HaplotypeScore=131.3056;InbreedingCoeff=0.4601;MQ=39.72;MQ0=30;MQRankSum=-0.017;QD=4.14;ReadPosRankSum=5.068;VQSLOD=2.0317;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:15:5.65:32,6,0	0/0:1,0:4:5.98:0,6,47	0/0:19,0:2:3.01:0,3,44	0/0:35,0:3:8.86:0,9,63	0/0:16,0:14:17.03:0,17,155	1/1:18,0:18:0.37:1,0,0	1/1:13,6:17:17.88:174,18,0	0/1:39,0:34:99:196,0,115	1/1:31,0:31:11.56:84,12,0	0/0:16,0:12:23.14:0,23,217	0/0:6,0:6:6.49:0,6,91	0/1:22,2:22:25.81:92,0,26	1/1:16,1:15:16.75:123,17,0	1/1:25,0:25:5.58:33,6,0	0/0:16,0:15:2.90:0,3,16	0/1:20,0:15:0.79:96,0,1	1/1:26,0:26:2.04:204,2,0	0/0:8,0:7:9.03:0,9,121	0/1:21,0:21:5.01:138,0,5	1/1:25,0:24:20.34:117,20,0	1/1:14,0:14:8.33:47,8,0	0/1:16,0:14:0:0,0,0	0/0:18,0:15:2.71:0,3,12	0/0:20,2:21:2.37:0,2,12	0/0:6,0:6:2.99:0,3,23	1/1:14,0:12:21.13:121,21,0	1/1:15,0:15:18.99:133,19,0	1/1:13,0:11:7.58:46,8,0
chr10	42519283	.	GTGTGTCTGTC	G	4640.45	PASS	AB=0.824;AC=31;AF=0.554;AN=56;BaseQRankSum=-4.159;DP=541;FS=1.913;HRun=0;HaplotypeScore=163.9831;InbreedingCoeff=0.2326;MQ=42.58;MQ0=28;MQRankSum=-2.468;QD=12.51;ReadPosRankSum=-2.337;VQSLOD=3.7235;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:16:6.02:80,6,0	0/0:5,0:4:6.02:0,6,203	0/0:21,0:4:6.02:0,6,92	0/0:37,0:4:8.78:0,9,61	0/0:14,0:13:20.09:0,20,523	1/1:3,0:18:0.30:1,0,0	0/1:17,0:20:58.36:58,0,122	1/1:35,0:30:2.47:272,2,0	0/1:2,0:30:2.95:6,0,3	0/1:19,0:16:71.09:71,0,324	0/1:9,0:9:57.33:57,0,131	0/1:4,15:19:4.50:472,0,5	1/1:2,14:15:18.53:556,19,0	1/1:3,22:25:5.66:187,6,0	0/1:22,0:21:35.59:104,0,36	0/0:20,0:15:24.04:0,24,623	0/0:26,0:25:9.69:0,10,642	0/1:8,0:8:47.81:48,0,189	1/1:20,1:19:3.18:426,3,0	1/1:25,0:24:30.28:429,30,0	1/1:14,0:14:11.81:137,12,0	0/1:2,17:17:0.02:0,0,0	0/0:2,18:19:2.69:0,3,12	0/0:6,21:26:1.80:0,2,11	0/1:7,0:7:17.91:18,0,53	1/1:13,1:13:38.88:691,39,0	1/1:15,0:15:24.71:666,25,0	1/1:17,0:15:7.70:360,8,0
chr10	42519285	.	GTGTCTGTC	G	4210.29	PASS	AB=1.000;AC=36;AF=0.643;AN=56;BaseQRankSum=-2.987;DP=548;FS=0.655;HRun=0;HaplotypeScore=159.6627;InbreedingCoeff=0.3352;MQ=42.76;MQ0=28;MQRankSum=-3.597;QD=10.05;ReadPosRankSum=-2.219;VQSLOD=3.2702;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:4,12:16:5.99:48,6,0	0/0:5,0:4:6.02:0,6,157	0/0:22,0:5:5.99:0,6,66	0/0:40,0:7:8.70:0,9,102	0/0:14,0:13:12.04:0,12,367	1/1:17,0:17:0.47:1,0,0	0/1:21,0:21:20.47:20,0,51	1/1:33,0:28:26.82:211,27,0	1/1:28,0:28:11.28:76,11,0	0/1:20,0:17:99:177,0,112	0/1:10,0:10:73.28:146,0,73	1/1:19,0:19:17.84:346,18,0	1/1:15,0:15:18.53:362,19,0	1/1:25,0:25:5.64:117,6,0	0/1:23,0:22:13.72:176,0,14	0/0:22,0:17:26.94:0,27,470	0/0:26,0:25:17.90:0,18,312	0/1:8,0:8:67.73:68,0,117	1/1:22,1:21:29.77:420,30,0	1/1:18,8:25:27.24:381,27,0	1/1:13,1:14:8.81:90,9,0	0/1:19,0:17:0.03:0,0,0	0/1:20,0:19:0:1,0,0	1/1:27,0:26:0.21:0,0,0	0/1:7,0:7:18.15:43,0,18	1/1:10,4:13:33.07:628,33,0	1/1:7,8:15:27.01:563,27,0	1/1:16,1:15:2.08:333,2,0
chr10	42519287	.	GTC	G	2275.81	PASS	AB=0.997;AC=32;AF=0.571;AN=56;BaseQRankSum=0.253;DP=546;FS=15.019;HRun=0;HaplotypeScore=137.9232;InbreedingCoeff=-0.0193;MQ=42.99;MQ0=27;MQRankSum=0.817;QD=5.50;ReadPosRankSum=-0.026;VQSLOD=2.5106;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:4.83:0,5,17	0/0:5,0:4:2.13:0,2,5	0/0:22,0:5:5.99:0,6,56	0/0:42,0:9:0.61:0,1,96	0/1:14,0:13:20.09:20,0,145	1/1:16,0:16:0.37:1,0,0	1/1:24,0:22:37.44:263,37,0	0/1:33,0:28:8.10:8,0,254	1/1:28,0:28:11.65:82,12,0	0/1:21,0:19:26.04:161,0,26	0/1:10,0:10:24.68:75,0,25	0/1:18,0:18:18.31:68,0,18	1/1:15,0:15:17.34:95,17,0	1/1:22,0:22:5.69:31,6,0	1/1:22,0:21:19.83:143,20,0	1/1:21,1:18:26.93:334,27,0	1/1:3,23:25:26.95:542,27,0	0/1:7,0:7:26.27:26,0,47	0/1:22,1:21:82.06:87,0,82	0/1:26,0:25:18.48:106,0,18	0/1:16,0:16:10.29:10,0,13	0/1:19,0:17:0.03:0,0,0	0/0:20,0:19:2.78:0,3,34	0/0:27,0:26:2.59:0,3,20	1/1:7,0:7:3.67:26,4,0	1/1:14,0:13:6.94:148,7,0	0/1:15,0:15:8.31:90,0,8	0/1:16,0:14:12.31:114,0,12
chr10	42519470	.	G	GT	4913.57	PASS	AB=0.594;AC=20;AF=0.357;AN=56;BaseQRankSum=-6.607;DP=597;FS=4.258;HRun=8;HaplotypeScore=65.6234;InbreedingCoeff=0.8426;MQ=63.51;MQ0=4;MQRankSum=0.668;QD=22.64;ReadPosRankSum=1.864;VQSLOD=5.6132;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,135,1228	0/0:13,0:13:33.02:0,33,302	0/0:22,0:14:31.06:0,31,243	0/0:17,0:11:12.18:0,12,134	0/0:31,0:31:63.09:0,63,617	1/1:2,18:20:45.13:519,45,0	1/1:3,17:19:48.14:554,48,0	1/1:5,14:17:36.07:401,36,0	1/1:3,10:13:27.08:312,27,0	0/0:19,0:19:41.98:0,42,375	0/0:18,0:18:42:0,42,380	0/0:20,0:20:54.01:0,54,489	0/0:20,0:18:45:0,45,405	0/0:18,0:18:36.01:0,36,328	0/0:16,0:16:33:0,33,302	0/0:17,0:16:30:0,30,274	1/1:43,0:43:64.82:486,65,0	0/0:28,0:28:75.01:0,75,681	0/1:7,8:15:21.81:276,0,22	1/1:4,15:19:42.08:470,42,0	0/1:2,13:15:15.34:340,0,15	0/0:20,0:20:51.02:0,51,467	0/0:19,0:19:39:0,39,352	0/0:31,0:30:84.05:0,84,769	0/0:19,0:19:51.01:0,51,467	1/1:4,16:20:48.14:552,48,0	1/1:1,15:16:45.13:519,45,0	1/1:1,16:17:42.12:485,42,0
chr10	42519478	.	T	TC	1867.29	PASS	AB=1.000;AC=12;AF=0.214;AN=56;BaseQRankSum=8.043;DP=572;FS=3.049;HRun=1;HaplotypeScore=74.3406;InbreedingCoeff=0.0686;MQ=62.92;MQ0=5;MQRankSum=-0.381;QD=8.57;ReadPosRankSum=2.984;VQSLOD=1.3146;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,135,1706	0/0:11,0:11:33.11:0,33,426	0/0:23,0:16:32.95:0,33,330	0/0:16,0:10:11.36:0,11,164	0/0:31,0:31:78.07:0,78,918	0/1:22,0:22:48.62:101,0,49	0/1:21,0:20:48.15:91,0,48	0/1:17,0:15:42.15:48,0,42	0/1:11,0:11:1.14:54,0,1	0/0:18,0:18:39.04:0,39,457	0/0:16,0:16:39.13:0,39,502	0/0:20,0:20:60.15:0,60,731	0/0:17,0:16:45.09:0,45,548	0/0:16,0:16:39.08:0,39,471	0/0:13,0:13:36.10:0,36,451	0/0:11,0:11:30.10:0,30,388	1/1:2,37:39:87.29:1230,87,0	0/0:28,0:28:81.09:0,81,1004	0/1:15,0:15:43.11:43,0,93	0/1:19,0:19:38.34:77,0,38	0/1:17,0:17:57.43:57,0,97	0/0:18,0:18:54.12:0,54,661	0/0:16,0:16:39.12:0,39,491	0/0:30,0:29:87.27:0,87,1110	0/0:19,0:19:57.17:0,57,710	0/1:20,0:19:3.40:108,0,3	0/1:18,0:18:23.32:139,0,23	0/1:19,0:19:11.09:77,0,11
chr10	42519709	.	C	CCT	215.92	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=-0.267;DP=551;FS=3.639;HRun=0;HaplotypeScore=115.1505;InbreedingCoeff=0.7596;MQ=71.54;MQ0=0;MQRankSum=0.245;QD=6.17;ReadPosRankSum=-0.849;VQSLOD=2.6750;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:87.21:0,87,1108	0/0:12,0:12:36.12:0,36,468	0/1:25,0:19:0.95:1,0,235	0/0:40,0:30:43.40:0,43,483	0/0:20,0:20:48.14:0,48,602	0/0:29,0:29:67.78:0,68,854	0/0:24,0:24:60.17:0,60,752	0/0:32,0:32:78.25:0,78,1000	0/0:7,0:7:21.06:0,21,258	0/0:23,0:23:63.18:0,63,794	0/0:13,0:13:39.08:0,39,463	0/0:19,0:19:57.15:0,57,710	0/0:16,0:16:45.14:0,45,571	0/0:14,0:14:39.13:0,39,507	0/0:17,0:17:51.13:0,51,621	1/1:1,9:10:18.06:306,18,0	0/0:17,0:17:42.13:0,42,532	0/0:22,0:22:54.08:0,54,648	0/0:16,0:16:42.12:0,42,531	0/0:16,0:16:45.13:0,45,555	0/0:26,0:26:66.19:0,66,841	0/0:9,0:9:21.06:0,21,261	0/0:16,0:16:42.09:0,42,501	0/0:18,0:18:45.13:0,45,569	0/0:15,0:15:45.14:0,45,573	0/0:17,0:17:48.14:0,48,598	0/0:19,0:19:51.15:0,51,648	0/0:22,0:22:66.20:0,66,838
chr10	42521815	.	ATC	A	4615.11	PASS	AB=1.000;AC=51;AF=0.911;AN=56;BaseQRankSum=-1.177;DP=546;FS=2.804;HRun=0;HaplotypeScore=124.6485;InbreedingCoeff=0.3178;MQ=68.61;MQ0=8;MQRankSum=1.771;QD=8.56;ReadPosRankSum=3.288;VQSLOD=4.2676;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,15:24:6.02:73,6,0	0/0:7,0:7:12.04:0,12,173	0/1:26,0:14:15.41:15,0,191	0/1:47,0:24:0.33:0,0,250	1/1:19,0:19:1.77:25,2,0	1/1:6,10:15:3.01:37,3,0	1/1:11,4:14:21.04:226,21,0	1/1:9,22:31:65.92:670,66,0	1/1:4,13:17:6.02:73,6,0	1/1:26,0:25:41.18:414,41,0	1/1:17,1:18:30.53:285,31,0	1/1:19,0:17:17.90:135,18,0	1/1:18,0:18:20.85:153,21,0	1/1:19,0:19:26.77:185,27,0	1/1:19,1:20:23.64:169,24,0	0/1:25,0:24:22.42:163,0,22	1/1:21,2:22:18.20:137,18,0	1/1:12,0:12:13.95:74,14,0	1/1:5,12:17:38.97:412,39,0	1/1:2,15:17:12.01:120,12,0	1/1:8,11:16:12.04:145,12,0	1/1:20,0:20:11.96:97,12,0	1/1:14,0:14:11.83:84,12,0	1/1:18,0:17:14.03:82,14,0	1/1:13,0:13:23.34:178,23,0	1/1:6,14:19:38.88:416,39,0	1/1:4,17:21:15.04:173,15,0	1/1:2,2:4:6.49:74,6,0
chr10	42521831	.	CTG	C	2873.48	PASS	AB=0.993;AC=44;AF=0.786;AN=56;BaseQRankSum=-1.501;DP=523;FS=9.525;HRun=0;HaplotypeScore=138.3071;InbreedingCoeff=0.0546;MQ=61.23;MQ0=17;MQRankSum=1.883;QD=5.65;ReadPosRankSum=-2.859;VQSLOD=2.2691;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:20:11.48:66,11,0	0/1:7,0:7:10.10:10,0,84	0/1:19,0:8:8.40:8,0,137	0/1:44,0:22:27.30:27,0,94	0/0:14,0:13:17.83:0,18,132	1/1:12,0:11:2.84:14,3,0	1/1:15,0:14:13.56:66,14,0	1/1:25,0:25:14.45:158,14,0	1/1:14,0:14:8.75:56,9,0	0/1:28,0:27:1.99:132,0,2	0/1:20,0:20:7.87:67,0,8	1/1:4,18:20:19.31:274,19,0	1/1:2,15:17:21.07:313,21,0	1/1:0,19:19:27.09:408,27,0	0/1:27,0:27:0.14:0,0,60	0/1:19,0:17:11.78:12,0,35	0/1:18,0:17:12.09:12,0,35	0/1:13,1:14:46.54:47,0,49	1/1:14,0:14:14.89:102,15,0	1/1:21,0:19:11.29:64,11,0	1/1:20,0:17:14.24:76,14,0	1/1:1,16:16:12.04:180,12,0	1/1:3,14:14:11.39:182,11,0	1/1:13,6:18:20.98:228,21,0	0/1:14,0:14:13.75:63,0,14	1/1:19,0:18:44.60:276,45,0	1/1:19,0:19:17.09:91,17,0	1/1:7,0:7:14.63:97,15,0
chr10	42521845	.	CTG	C	2111.90	PASS	AB=0.970;AC=37;AF=0.661;AN=56;BaseQRankSum=-5.481;DP=509;FS=40.476;HRun=0;HaplotypeScore=151.0653;InbreedingCoeff=-0.0605;MQ=52.26;MQ0=21;MQRankSum=-2.147;QD=4.55;ReadPosRankSum=-4.833;VQSLOD=-0.0989;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:19:2.66:61,0,3	1/1:6,0:6:7.89:72,8,0	0/0:9,0:2:5.93:0,6,74	0/1:21,0:7:4.10:4,0,54	1/1:18,1:18:16:113,16,0	1/1:21,0:19:9.03:92,9,0	1/1:16,0:15:8.99:74,9,0	1/1:15,0:14:17.77:126,18,0	0/1:15,0:15:22.84:53,0,23	0/1:29,0:27:99:200,0,139	0/1:19,0:19:40.18:40,0,79	0/1:26,0:24:17.19:60,0,17	0/1:21,0:21:26.20:31,0,26	0/1:19,0:19:3.48:23,0,3	0/1:23,4:27:39.61:40,0,138	0/1:22,0:20:20.30:20,0,249	0/1:21,3:22:16.02:90,0,16	0/1:13,1:14:49.67:50,0,70	1/1:12,0:12:22.78:151,23,0	1/1:25,0:23:17.73:137,18,0	1/1:17,0:15:11.79:88,12,0	1/1:17,0:16:6.53:43,7,0	0/0:18,0:15:4.26:0,4,11	0/0:18,0:17:11.94:0,12,77	0/1:11,0:11:18.48:18,0,43	1/1:19,0:18:51.16:409,51,0	1/1:15,0:15:20.59:141,21,0	1/1:9,0:8:17.93:142,18,0
chr10	42521853	.	CTCTG	C	2976.08	PASS	AB=0.987;AC=47;AF=0.839;AN=56;BaseQRankSum=-2.356;DP=462;FS=4.867;HRun=0;HaplotypeScore=145.3047;InbreedingCoeff=-0.1660;MQ=45.48;MQ0=21;MQRankSum=0.127;QD=6.44;ReadPosRankSum=-2.164;VQSLOD=2.2820;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:17:4.32:86,4,0	1/1:3,0:3:3:27,3,0	0/1:10,0:2:14.01:16,0,14	0/1:25,0:3:12.82:13,0,13	0/1:20,0:19:5.93:6,0,54	1/1:22,0:20:6.65:60,7,0	1/1:15,0:14:0.03:1,0,0	1/1:9,0:8:14.07:75,14,0	0/1:12,0:12:25.53:39,0,26	0/1:27,1:26:29.47:473,0,29	1/1:16,1:16:7.55:121,8,0	0/1:22,1:22:52.82:111,0,53	1/1:20,1:21:0.51:178,1,0	1/1:20,0:20:1.36:150,1,0	1/1:25,0:25:27:225,27,0	0/1:20,0:18:60.35:60,0,223	0/1:21,1:20:5.26:135,0,5	1/1:14,0:14:30.14:254,30,0	1/1:10,0:10:15.32:115,15,0	1/1:18,0:16:20.59:161,21,0	1/1:15,0:13:6:51,6,0	1/1:16,0:15:17.30:110,17,0	1/1:16,0:13:5.20:30,5,0	0/1:18,0:17:34.57:35,0,56	1/1:7,0:7:11.86:113,12,0	1/1:16,0:15:36.29:306,36,0	1/1:10,0:10:11.64:79,12,0	1/1:8,0:7:12.26:84,12,0
chr10	42521855	.	CTG	C	3675.97	PASS	AB=0.944;AC=48;AF=0.857;AN=56;BaseQRankSum=-2.103;DP=458;FS=9.978;HRun=0;HaplotypeScore=133.0201;InbreedingCoeff=-0.1825;MQ=46.40;MQ0=22;MQRankSum=-0.313;QD=8.03;ReadPosRankSum=-2.029;VQSLOD=2.2771;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:18,0:14:2.72:81,0,3	1/1:3,0:3:3:25,3,0	0/1:11,1:3:14.02:14,0,14	0/1:30,0:5:12.02:15,0,12	0/1:20,0:19:25.97:26,0,73	1/1:21,0:19:16.61:139,17,0	1/1:15,0:14:5.03:30,5,0	1/1:9,0:9:16.86:100,17,0	0/1:11,1:12:15.57:53,0,16	0/1:26,2:26:33.23:415,0,33	1/1:18,0:17:0.28:124,0,0	1/1:21,1:21:14.31:198,14,0	1/1:20,1:21:20.49:269,20,0	1/1:19,0:19:25.17:196,25,0	1/1:18,6:24:29.30:226,29,0	0/1:14,6:18:99:109,0,148	1/1:23,0:21:19.94:187,20,0	1/1:11,2:13:27.79:210,28,0	1/1:9,0:9:18.35:149,18,0	1/1:19,0:17:23.72:186,24,0	1/1:14,0:12:6:51,6,0	1/1:16,0:15:20.74:171,21,0	1/1:14,0:11:5.15:31,5,0	0/1:17,0:16:35.72:36,0,38	1/1:7,1:8:14.98:129,15,0	1/1:15,0:14:36.75:294,37,0	1/1:9,0:9:11.69:78,12,0	1/1:8,0:7:17.81:133,18,0
chr10	42521863	.	CTCTG	C	3228.29	PASS	AB=0.992;AC=47;AF=0.839;AN=56;BaseQRankSum=-2.878;DP=487;FS=8.102;HRun=0;HaplotypeScore=144.5877;InbreedingCoeff=-0.2060;MQ=49.97;MQ0=22;MQRankSum=0.824;QD=6.63;ReadPosRankSum=-3.050;VQSLOD=1.1661;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:17:8.46:94,8,0	1/1:4,0:4:6:52,6,0	0/1:16,0:4:9.59:10,0,10	0/1:39,0:10:6.55:13,0,7	0/1:23,0:22:19.89:25,0,20	1/1:21,0:19:8.35:84,8,0	1/1:19,0:18:5.29:48,5,0	1/1:11,0:10:3.85:80,4,0	0/1:13,0:13:22.52:61,0,23	1/1:26,2:26:18.75:502,19,0	1/1:20,0:19:7.11:171,7,0	0/1:24,0:23:49.48:133,0,49	1/1:20,0:20:5.93:183,6,0	1/1:19,0:19:0.06:153,0,0	1/1:21,2:23:23.98:175,24,0	0/1:19,1:18:54.89:135,0,55	0/1:22,0:20:0.36:161,0,0	1/1:11,1:12:13.64:199,14,0	0/1:11,0:10:13.31:87,0,13	1/1:20,0:18:21.67:169,22,0	1/1:16,0:13:8.95:70,9,0	1/1:13,0:13:15.92:107,16,0	1/1:13,0:10:5.29:35,5,0	0/1:16,0:15:33.83:34,0,55	1/1:9,0:9:15.33:139,15,0	1/1:16,0:15:31.30:271,31,0	1/1:7,0:7:11.76:84,12,0	1/1:10,0:9:12.83:89,13,0
chr10	42521865	.	CTG	C	4287.12	PASS	AB=0.989;AC=49;AF=0.875;AN=56;BaseQRankSum=-2.609;DP=494;FS=8.852;HRun=0;HaplotypeScore=131.7899;InbreedingCoeff=-0.1386;MQ=52.41;MQ0=23;MQRankSum=-0.252;QD=8.68;ReadPosRankSum=-2.298;VQSLOD=3.3772;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:17:12.24:99,12,0	1/1:4,0:4:8.99:75,9,0	0/1:18,0:5:0.42:22,0,0	0/1:43,0:14:30.19:34,0,30	0/1:23,0:22:17.51:64,0,18	1/1:22,0:20:19.28:165,19,0	1/1:18,0:17:10.76:80,11,0	0/1:10,0:9:6.89:75,0,7	0/1:11,1:12:13.31:61,0,13	1/1:28,0:26:51.86:500,52,0	1/1:20,0:19:16.58:192,17,0	1/1:24,0:23:20.30:247,20,0	1/1:21,0:21:23.56:311,24,0	1/1:18,0:18:24.87:202,25,0	1/1:21,1:22:23.27:170,23,0	1/1:21,1:20:24.12:255,24,0	1/1:23,0:21:22.46:219,22,0	1/1:13,0:13:14.40:180,14,0	0/1:11,0:10:10.19:129,0,10	1/1:20,0:18:21.39:169,21,0	1/1:16,0:13:8.95:70,9,0	1/1:12,0:12:21.06:170,21,0	1/1:13,0:10:8.17:59,8,0	0/1:15,0:14:33.65:34,0,38	1/1:8,1:9:15.46:130,15,0	1/1:16,0:15:35.88:289,36,0	1/1:8,0:8:14.71:103,15,0	1/1:11,0:10:24.36:188,24,0
chr10	42522202	.	C	CT	127.62	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-0.186;DP=454;FS=13.475;HRun=2;HaplotypeScore=63.3465;InbreedingCoeff=0.9209;MQ=83.19;MQ0=1;MQRankSum=-0.022;QD=21.27;ReadPosRankSum=-0.540;VQSLOD=2.1731;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:87.25:0,87,1063	1/1:0,6:6:15.05:216,15,0	0/0:21,1:18:29.10:0,29,492	0/0:18,0:15:10.08:0,10,325	0/0:13,0:13:27.08:0,27,335	0/0:22,0:22:54.17:0,54,667	0/0:17,0:17:39.12:0,39,483	0/0:27,0:27:69.21:0,69,845	0/0:14,0:14:33.09:0,33,396	0/0:21,0:21:57.18:0,57,706	0/0:13,0:13:33.10:0,33,408	0/0:10,0:10:30.09:0,30,372	0/0:11,0:11:33.10:0,33,409	0/0:13,0:13:33.10:0,33,409	0/0:21,0:21:48.10:0,48,566	0/0:12,0:12:36.11:0,36,445	0/0:25,0:25:69.04:0,69,805	0/0:11,0:11:33.10:0,33,409	0/0:17,0:17:42.12:0,42,510	0/0:17,0:17:48.15:0,48,595	0/0:19,0:18:48.15:0,48,595	0/0:6,0:6:15.05:0,15,186	0/0:13,0:13:36.11:0,36,446	0/0:12,0:12:27.04:0,27,317	0/0:15,0:15:42.13:0,42,521	0/0:17,0:17:51.14:0,51,610	0/0:15,0:15:42.12:0,42,507	0/0:14,0:14:33.09:0,33,397
chr10	42522216	.	T	TA	1112.31	PASS	AB=0.962;AC=20;AF=0.357;AN=56;BaseQRankSum=3.115;DP=481;FS=26.158;HRun=9;HaplotypeScore=73.2289;InbreedingCoeff=0.0929;MQ=88.02;MQ0=3;MQRankSum=-2.537;QD=3.92;ReadPosRankSum=1.873;VQSLOD=-0.1467;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:30:14.25:14,0,127	0/0:5,0:5:5.19:0,5,21	0/0:31,0:23:23.59:0,24,194	0/1:28,0:21:5.58:6,0,70	1/1:4,8:13:17.06:139,17,0	1/1:4,20:24:13.08:372,13,0	1/1:4,19:23:36.10:398,36,0	0/0:22,0:22:14.29:0,14,227	0/1:2,12:14:4.99:178,0,5	0/0:19,0:19:35.10:0,35,301	0/0:9,0:9:14.94:0,15,124	0/1:9,0:9:10.53:11,0,16	0/1:15,0:15:30.38:30,0,45	0/1:15,0:15:22.16:22,0,26	0/0:20,0:20:53.92:0,54,456	0/1:15,0:15:20.96:21,0,49	0/0:19,0:19:34.97:0,35,208	0/0:9,0:11:23.02:0,23,188	0/0:14,0:14:15.74:0,16,158	0/1:20,0:20:32.49:32,0,50	0/1:24,0:23:2.41:2,0,67	1/1:6,0:6:7.13:21,7,0	0/0:13,0:13:1.67:0,2,126	0/1:18,0:18:2.02:2,0,57	0/0:13,0:13:32.71:0,33,257	0/0:18,0:18:21.79:0,22,206	0/1:17,0:17:19.88:20,0,64	0/1:11,0:11:14.84:15,0,32
chr10	42522225	.	A	AG	2003.22	PASS	AB=0.796;AC=26;AF=0.481;AN=54;BaseQRankSum=-2.110;DP=537;FS=26.159;HRun=10;HaplotypeScore=88.9319;InbreedingCoeff=0.1100;MQ=87.64;MQ0=5;MQRankSum=-1.247;QD=5.52;ReadPosRankSum=2.116;VQSLOD=0.2320;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:18,19:38:2.42:216,2,0	./.	0/0:44,0:29:16.87:0,17,174	0/0:33,1:23:8.08:0,8,81	0/1:15,0:15:8.57:9,0,72	0/1:26,0:26:22.51:66,0,23	0/1:22,0:22:15.46:50,0,15	1/1:17,7:25:18.01:175,18,0	0/1:17,0:17:24.29:24,0,47	0/0:19,0:19:32.87:0,33,261	0/0:8,0:8:11.95:0,12,95	0/1:4,8:12:12.57:83,0,13	1/1:5,9:14:10.18:171,10,0	0/1:4,9:13:1.86:169,0,2	0/0:20,0:20:41.92:0,42,344	0/1:7,13:21:13.24:213,0,13	0/0:3,0:18:20.37:0,20,60	0/0:12,0:12:32.78:0,33,247	0/1:15,2:18:11.88:65,0,12	1/1:9,6:16:20.33:196,20,0	1/1:11,13:24:9.02:95,9,0	1/1:5,4:9:9.02:95,9,0	0/1:11,3:14:16.44:99,0,16	0/1:5,15:21:9.78:82,0,10	0/0:16,0:16:29.80:0,30,225	0/1:18,2:20:37.42:53,0,37	1/1:9,16:25:20.96:209,21,0	0/1:4,8:12:9.58:112,0,10
chr10	42522845	.	C	CATCT	11046.09	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-13.843;DP=680;FS=23.333;HRun=0;HaplotypeScore=106.9957;InbreedingCoeff=0.9977;MQ=70.70;MQ0=0;MQRankSum=-4.121;QD=69.91;ReadPosRankSum=2.012;VQSLOD=4.4807;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,102,1870	0/0:8,0:8:24.08:0,24,439	0/0:12,0:12:33.11:0,33,546	0/0:14,0:14:29.86:0,30,530	0/0:25,0:25:66.23:0,66,1215	0/0:35,0:35:99:0,105,1959	0/0:25,0:25:69.18:0,69,1191	0/0:23,0:23:66.22:0,66,1187	0/0:28,0:28:72.22:0,72,1273	1/1:3,24:27:81.28:2136,81,0	1/1:3,16:19:51.18:1346,51,0	0/0:18,0:18:51.17:0,51,952	0/0:26,0:26:69.22:0,69,1256	0/0:20,0:20:57.20:0,57,1048	1/1:2,30:32:84.29:2235,84,0	1/1:0,30:30:87.30:2318,87,0	0/0:35,0:35:99:0,105,1786	1/1:2,12:14:32.93:879,33,0	0/0:16,0:16:42.13:0,42,750	0/0:36,0:36:90.31:0,90,1673	0/0:36,0:36:99:0,102,1770	0/0:26,0:26:72.23:0,72,1286	0/0:23,0:23:59.91:0,60,1019	0/0:31,0:31:87.26:0,87,1559	1/1:8,27:36:81.28:2132,81,0	0/0:21,0:21:60.19:0,60,1090	0/0:21,0:21:54.15:0,54,935	0/0:7,0:7:18.06:0,18,336
chr10	42524929	.	C	CT	21775.89	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=4.147;DP=646;FS=4.695;HRun=2;HaplotypeScore=111.2177;InbreedingCoeff=0.9981;MQ=80.69;MQ0=1;MQRankSum=-8.445;QD=35.52;ReadPosRankSum=5.269;VQSLOD=4.5557;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,12:13:27.09:388,27,0	1/1:0,13:13:30.08:432,30,0	0/0:20,0:20:51.10:0,51,590	0/0:13,0:13:33.10:0,33,403	1/1:0,36:36:99:1314,99,0	1/1:1,26:27:72.17:1010,72,0	1/1:0,17:17:33.07:451,33,0	1/1:6,35:40:91.10:1398,91,0	1/1:0,25:25:63.21:905,63,0	1/1:1,24:24:69.23:993,69,0	1/1:2,23:25:69:916,69,0	1/1:2,16:19:51.06:706,51,0	1/1:3,22:25:63.21:906,63,0	1/1:1,19:21:51.16:716,51,0	1/1:1,22:23:66.22:942,66,0	1/1:0,21:20:51.17:730,51,0	1/1:0,17:17:42.14:604,42,0	1/1:1,12:13:27.09:386,27,0	1/1:6,20:25:60.03:807,60,0	1/1:0,25:25:68.98:915,69,0	1/1:3,25:28:69.23:990,69,0	1/1:1,19:20:51.06:701,51,0	1/1:2,30:33:84.13:1196,84,0	1/1:1,15:16:33.11:474,33,0	1/1:3,21:24:69.22:971,69,0	1/1:1,35:36:99:1477,105,0	1/1:4,29:33:72.09:972,72,0	1/1:0,11:11:33.11:475,33,0
chr10	42524931	.	TA	T	9054.43	PASS	AB=1.000;AC=51;AF=0.911;AN=56;BaseQRankSum=6.112;DP=641;FS=1.064;HRun=1;HaplotypeScore=154.9104;InbreedingCoeff=0.6819;MQ=81.35;MQ0=1;MQRankSum=-7.367;QD=14.92;ReadPosRankSum=10.135;VQSLOD=3.7773;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:14:6.02:127,6,0	1/1:14,0:14:10.49:159,10,0	0/0:19,0:19:54.15:0,54,793	0/0:15,0:15:42.10:0,42,599	1/1:35,0:35:68.87:599,69,0	1/1:27,0:27:48.37:398,48,0	1/1:17,0:17:20.94:174,21,0	1/1:38,0:37:79.82:719,80,0	1/1:25,0:25:41.75:331,42,0	1/1:25,0:24:48.89:428,49,0	1/1:26,0:26:25.29:389,25,0	1/1:18,0:18:28.12:307,28,0	1/1:24,0:24:23.35:327,23,0	1/1:21,0:21:25.79:273,26,0	1/1:22,0:23:64.58:401,65,0	1/1:21,0:20:50.17:313,50,0	1/1:17,0:17:40.97:240,41,0	1/1:13,1:14:6.12:145,6,0	1/1:22,2:23:16.58:391,17,0	1/1:25,0:25:40.83:414,41,0	1/1:28,0:28:21.08:342,21,0	0/1:20,0:20:7.25:255,0,7	1/1:33,1:34:54:443,54,0	1/1:15,0:15:5.14:154,5,0	1/1:22,1:23:68.04:453,68,0	1/1:36,0:36:83.49:679,83,0	1/1:30,2:32:48.08:399,48,0	1/1:11,0:11:32.31:191,32,0
chr10	42528992	.	A	AT	5472.34	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-12.707;DP=488;FS=2.160;HRun=6;HaplotypeScore=46.3825;InbreedingCoeff=0.9934;MQ=78.20;MQ0=0;MQRankSum=-0.678;QD=31.27;ReadPosRankSum=0.260;VQSLOD=5.1187;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,19:20:51.16:642,51,0	0/0:7,0:7:21.05:0,21,214	0/0:11,0:11:14.91:0,15,134	0/0:14,0:14:19.27:0,19,159	0/0:23,0:23:63.14:0,63,643	0/0:25,0:25:69.13:0,69,691	0/0:12,0:12:24.04:0,24,245	1/1:3,29:33:90.14:1095,90,0	0/0:13,0:13:30.07:0,30,306	0/0:24,0:24:66.15:0,66,673	0/0:17,0:17:48.11:0,48,489	0/0:18,0:18:54.12:0,54,551	0/0:19,0:19:54.12:0,54,550	0/0:13,0:13:36.08:0,36,367	0/0:13,0:13:33.07:0,33,336	0/0:11,0:11:30.07:0,30,305	0/0:28,0:28:84.14:0,84,835	0/0:12,0:12:33.07:0,33,337	1/1:5,15:20:45.14:566,45,0	1/1:1,18:19:51.16:641,51,0	1/1:3,6:9:18.06:226,18,0	0/0:10,0:10:30.05:0,30,299	0/0:13,0:13:33.07:0,33,337	0/0:15,0:15:39.06:0,39,390	0/0:15,0:15:42.09:0,42,428	1/1:1,32:33:96.31:1208,96,0	1/1:0,21:20:42.13:528,42,0	1/1:0,20:20:45.14:566,45,0
chr10	42529216	.	TTTC	T	554.50	PASS	AB=0.970;AC=15;AF=0.268;AN=56;BaseQRankSum=6.460;DP=377;FS=28.601;HRun=0;HaplotypeScore=80.3044;InbreedingCoeff=-0.1503;MQ=77.25;MQ0=1;MQRankSum=-1.860;QD=2.98;ReadPosRankSum=4.187;VQSLOD=0.0132;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:26:99:107,0,134	0/0:5,0:5:12.03:0,12,141	0/0:29,0:22:41.83:0,42,490	0/0:25,0:14:17.01:0,17,210	0/1:16,0:16:38.74:39,0,78	0/0:18,0:18:41.74:0,42,592	0/0:15,0:15:41.17:0,41,496	0/1:23,0:23:18.67:19,0,261	0/0:10,0:10:14.80:0,15,258	0/0:12,0:12:25.49:0,25,105	0/0:14,0:14:27.74:0,28,130	0/0:10,0:10:29.67:0,30,238	0/0:15,0:15:23.66:0,24,179	0/0:8,0:8:17.69:0,18,151	0/1:9,1:10:6.88:7,0,98	0/0:13,0:13:38.92:0,39,518	0/1:18,0:18:5.92:6,0,75	0/1:13,1:14:47.98:48,0,142	0/1:13,0:12:10.80:11,0,93	1/1:7,0:7:15.95:65,16,0	0/1:5,0:5:12.09:12,0,33	0/1:5,0:5:8.14:8,0,85	0/0:8,0:8:20.17:0,20,208	0/0:9,0:9:24.82:0,25,214	0/1:8,1:9:17:62,0,17	0/1:21,1:22:11.40:222,0,11	0/1:9,1:10:19.32:96,0,19	0/1:8,0:8:13.06:13,0,51
chr10	42529219	.	CTTT	C	2071.50	PASS	AB=0.662;AC=18;AF=0.321;AN=56;BaseQRankSum=-1.893;DP=386;FS=27.335;HRun=15;HaplotypeScore=80.6405;InbreedingCoeff=0.5746;MQ=79.80;MQ0=1;MQRankSum=-1.108;QD=11.91;ReadPosRankSum=4.352;VQSLOD=0.0261;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:6,19:26:18.85:388,0,19	0/0:5,0:7:16.60:0,17,209	0/0:33,0:26:41.39:0,41,439	0/0:26,0:15:30.71:0,31,278	1/1:3,0:16:29.32:176,29,0	0/0:15,0:16:39.08:0,39,608	0/0:14,0:15:27.09:0,27,450	0/1:12,10:23:3.97:228,0,4	0/0:9,0:10:25.81:0,26,297	0/0:1,0:12:14.50:0,14,34	0/0:3,0:13:9.85:0,10,25	0/0:4,0:11:29.91:0,30,237	0/0:5,0:14:19.19:0,19,143	0/0:6,0:9:20.98:0,21,209	0/0:6,0:10:10.27:0,10,46	0/0:12,0:13:27.09:0,27,471	1/1:7,0:21:43.31:239,43,0	0/1:8,0:13:12.99:13,0,71	0/1:6,7:12:1.75:187,0,2	1/1:0,6:6:18.05:202,18,0	0/1:3,2:5:1.47:29,0,1	0/0:3,0:5:7.53:0,8,50	0/0:5,0:8:17.98:0,18,185	0/0:4,0:9:23.92:0,24,205	0/1:4,0:9:8.58:16,0,9	1/1:6,16:23:43.10:520,43,0	1/1:4,7:11:13.95:196,14,0	1/1:2,6:8:5.94:67,6,0
chr10	42529290	.	A	AT	3131.33	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-0.114;DP=274;FS=17.456;HRun=7;HaplotypeScore=34.0533;InbreedingCoeff=0.9117;MQ=58.33;MQ0=5;MQRankSum=1.465;QD=26.31;ReadPosRankSum=2.109;VQSLOD=1.9691;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:16:35.79:0,36,312	1/1:2,5:6:12.04:145,12,0	0/0:11,0:7:20.40:0,20,182	0/0:3,0:2:2.99:0,3,29	1/1:1,9:10:27.08:322,27,0	1/1:1,11:12:33.10:399,33,0	1/1:1,8:9:21.06:254,21,0	0/0:24,0:22:60.06:0,60,567	1/1:1,7:8:21.06:254,21,0	1/1:7,6:13:4.12:331,4,0	1/1:2,5:7:18.06:217,18,0	0/0:11,0:11:30.05:0,30,290	0/0:11,0:11:27.04:0,27,261	0/0:9,0:9:21.03:0,21,203	1/1:2,4:6:15.05:181,15,0	1/1:3,4:7:12.04:145,12,0	1/1:2,15:16:42.13:500,42,0	1/1:2,8:10:11.54:205,12,0	0/0:8,0:6:15.02:0,15,141	0/0:4,0:4:12.02:0,12,116	0/0:5,0:5:15.02:0,15,145	0/0:5,0:5:12.01:0,12,116	0/0:4,0:4:9.01:0,9,87	0/0:8,0:8:17.95:0,18,161	1/1:3,10:13:33.10:398,33,0	0/0:18,0:17:48.08:0,48,464	0/0:7,0:7:17.94:0,18,174	0/0:9,0:8:20.40:0,20,182
chr10	42530239	.	CCATA	C	800.65	PASS	AB=0.551;AC=1;AF=0.018;AN=56;BaseQRankSum=7.094;DP=955;FS=10.395;HRun=0;HaplotypeScore=160.0654;InbreedingCoeff=-0.0185;MQ=60.47;MQ0=0;MQRankSum=-0.389;QD=29.65;ReadPosRankSum=0.950;VQSLOD=2.8538;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:41:82.22:0,82,2049	0/0:16,0:16:36.12:0,36,846	0/0:32,0:20:18.69:0,19,610	0/0:23,0:18:30.54:0,31,847	0/0:35,0:35:93.26:0,93,2018	0/0:36,0:35:90.26:0,90,2038	0/0:20,0:20:54.14:0,54,1133	0/0:37,0:37:90.28:0,90,2035	0/0:40,0:40:93.30:0,93,2193	0/0:60,0:60:99:0,160,3689	0/0:29,0:29:81.27:0,81,1870	0/0:48,0:48:99:0,129,3126	0/0:38,0:38:93.26:0,93,2058	0/0:44,0:44:99:0,117,2735	0/0:53,0:53:99:0,144,3395	0/1:5,22:27:85.17:875,0,85	0/0:28,0:28:67.47:0,67,1604	0/0:15,0:15:42.13:0,42,981	0/0:20,0:20:51.12:0,51,1083	0/0:41,0:41:99:0,102,2452	0/0:52,0:52:99:0,141,3288	0/0:28,0:28:60.07:0,60,1404	0/0:36,0:36:99:0,99,2302	0/0:30,0:30:65.99:0,66,1464	0/0:30,0:30:75.12:0,75,1761	0/0:33,0:33:87.26:0,87,1947	0/0:43,0:43:99:0,105,2522	0/0:18,0:18:48.16:0,48,1204
chr10	42530776	.	G	GCCC	511.71	PASS	AB=0.956;AC=7;AF=0.125;AN=56;BaseQRankSum=7.094;DP=477;FS=2.556;HRun=0;HaplotypeScore=120.6990;InbreedingCoeff=0.2194;MQ=75.39;MQ0=6;MQRankSum=-5.345;QD=4.74;ReadPosRankSum=2.541;VQSLOD=2.4889;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:15:36.97:0,37,600	0/0:11,0:11:33.10:0,33,584	0/0:43,0:18:54.17:0,54,875	0/0:38,0:16:29.51:0,30,336	0/1:33,2:35:36.96:258,0,37	0/0:23,0:23:6.21:0,6,219	0/0:19,0:19:30.67:0,31,339	0/0:22,0:21:63.19:0,63,978	0/0:17,0:17:7.94:0,8,215	0/1:16,1:17:63.33:65,0,63	0/1:19,0:20:2.58:105,0,3	0/0:7,0:7:21.07:0,21,364	0/0:12,0:11:30.10:0,30,529	0/0:14,0:14:39.12:0,39,671	0/1:14,1:15:30.02:79,0,30	0/0:16,0:16:48.15:0,48,809	0/0:14,0:14:36.10:0,36,543	1/1:6,0:6:13.51:87,14,0	0/0:12,0:12:33.11:0,33,579	0/0:23,0:23:60.64:0,61,980	0/0:7,0:7:21.05:0,21,332	0/0:14,0:15:42.13:0,42,710	0/0:14,0:14:27.06:0,27,396	0/0:5,0:5:12.04:0,12,206	0/1:15,0:15:50.20:50,0,66	0/0:12,0:12:33.03:0,33,526	0/0:19,0:19:6.02:0,6,99	0/0:8,0:9:15.03:0,15,216
chr10	42530777	.	A	ACCC	4983.17	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=0.261;DP=492;FS=12.504;HRun=5;HaplotypeScore=114.0176;InbreedingCoeff=0.9435;MQ=74.22;MQ0=6;MQRankSum=-4.731;QD=29.49;ReadPosRankSum=-0.452;VQSLOD=1.7817;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:16:30.94:0,31,330	0/0:10,0:10:30.10:0,30,436	0/0:47,0:18:39.04:0,39,444	0/0:41,0:16:13.69:0,14,172	1/1:28,7:35:90.26:1459,90,0	1/1:22,0:23:26.14:175,26,0	1/1:18,0:20:47.28:364,47,0	0/0:24,0:23:43.87:0,44,447	1/1:19,0:20:40.54:329,41,0	1/1:14,2:16:38.87:610,39,0	1/1:17,2:19:47.92:682,48,0	0/0:7,0:7:18.50:0,19,196	0/0:12,0:11:30.04:0,30,297	0/0:14,0:14:36.05:0,36,372	1/1:14,1:15:39.12:553,39,0	0/0:15,0:15:39.49:0,39,379	0/0:14,0:14:31.66:0,32,285	1/1:5,1:6:18.06:328,18,0	0/0:12,0:12:26.76:0,27,262	0/0:23,0:23:49.01:0,49,503	0/0:7,0:7:12.01:0,12,114	0/0:15,0:16:39:0,39,389	0/0:16,0:16:18.03:0,18,201	0/0:6,0:6:9.01:0,9,86	1/1:13,2:15:30.10:482,30,0	0/0:14,0:14:30.02:0,30,338	0/0:19,0:19:2.98:0,3,22	0/0:9,0:9:9.45:0,9,72
chr10	42530781	.	C	CAAAAA	2457.15	PASS	AB=0.892;AC=30;AF=0.536;AN=56;BaseQRankSum=-6.615;DP=523;FS=1.378;HRun=0;HaplotypeScore=157.0209;InbreedingCoeff=0.5812;MQ=68.67;MQ0=7;MQRankSum=1.287;QD=8.22;ReadPosRankSum=-3.865;VQSLOD=2.0027;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:17:21.90:276,22,0	0/0:12,0:12:36.07:0,36,540	0/0:44,0:15:38.66:0,39,386	0/1:50,0:18:36.03:36,0,139	0/0:34,0:34:89.35:0,89,1194	0/0:23,0:23:41.34:0,41,761	0/0:20,0:20:57.04:0,57,911	1/1:23,0:22:42.87:430,43,0	0/0:21,0:21:53.94:0,54,796	0/0:16,0:16:44.84:0,45,629	0/0:19,0:19:50.83:0,51,848	1/1:9,0:10:4.20:93,4,0	1/1:17,0:16:22.25:147,22,0	1/1:18,0:18:0.63:162,1,0	0/0:13,0:13:39:0,39,664	1/1:19,0:19:2.81:100,3,0	0/1:14,0:14:6.80:113,0,7	0/0:6,0:6:18.06:0,18,270	1/1:10,0:10:17.71:207,18,0	1/1:22,0:22:18.55:335,19,0	1/1:6,0:6:4.58:46,5,0	0/1:23,0:24:29.50:168,0,29	0/1:7,0:20:35.24:35,0,42	1/1:6,0:6:9.80:80,10,0	0/0:16,0:16:35.88:0,36,461	1/1:15,0:15:24.85:297,25,0	1/1:0,2:19:2.85:60,3,0	1/1:8,0:8:6.07:72,6,0
chr10	42531591	.	AC	A	2156.76	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=3.214;DP=506;FS=19.905;HRun=9;HaplotypeScore=67.3119;InbreedingCoeff=0.9528;MQ=76.89;MQ0=0;MQRankSum=-1.222;QD=20.16;ReadPosRankSum=0.695;VQSLOD=2.4203;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:19:21.56:0,22,134	0/0:2,0:6:11.56:0,12,78	0/0:20,0:20:42.98:0,43,460	0/0:20,0:19:13.51:0,14,291	0/0:17,0:17:48.13:0,48,543	1/1:3,15:18:45.01:412,45,0	1/1:5,19:24:54.02:493,54,0	0/0:8,0:23:38.12:0,38,236	1/1:4,14:18:42.02:383,42,0	0/0:19,0:19:54.15:0,54,614	0/0:23,0:23:63.18:0,63,720	0/0:10,0:10:30.09:0,30,346	0/0:19,0:19:54.15:0,54,610	0/0:15,0:15:36.09:0,36,402	0/0:22,0:22:60.17:0,60,686	1/1:1,20:21:54.03:494,54,0	1/1:3,23:26:60.03:549,60,0	0/0:16,0:16:45.11:0,45,498	0/0:8,0:16:34.95:0,35,241	0/0:8,0:19:43.44:0,43,307	0/0:6,0:14:20.21:0,20,131	0/0:16,0:16:42.10:0,42,465	0/0:21,0:21:54.16:0,54,621	0/0:17,1:19:4.67:0,5,326	0/0:18,0:18:33.07:0,33,358	0/0:6,0:16:31.57:0,32,182	0/0:4,0:23:46.14:0,46,281	0/0:3,0:8:17.38:0,17,127
chr10	42533214	.	G	GT	27220.60	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-9.651;DP=672;FS=1.869;HRun=0;HaplotypeScore=59.5250;InbreedingCoeff=0.9148;MQ=90.87;MQ0=0;MQRankSum=-11.404;QD=43.90;ReadPosRankSum=5.693;VQSLOD=4.9367;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,43:44:99:1918,120,0	1/1:1,7:8:21.07:335,21,0	0/0:28,0:28:79.79:0,80,1048	0/0:22,0:24:60.20:0,60,832	1/1:1,27:28:72.25:1151,72,0	1/1:0,18:18:45.15:719,45,0	1/1:0,32:32:87.30:1391,87,0	1/1:2,23:25:72.23:1123,72,0	1/1:1,18:19:48.16:768,48,0	1/1:0,22:22:66.23:1055,66,0	1/1:1,19:20:57.19:911,57,0	1/1:0,24:24:72.25:1151,72,0	1/1:0,23:24:57.19:904,57,0	1/1:1,21:22:63.21:1007,63,0	1/1:2,25:27:78.25:1224,78,0	1/1:1,19:20:57.19:912,57,0	1/1:0,30:30:81.28:1295,81,0	1/1:0,14:14:42.14:671,42,0	1/1:3,15:18:48.16:767,48,0	1/1:0,18:18:42.14:672,42,0	1/1:0,43:43:99:2014,126,0	1/1:0,16:16:48.16:767,48,0	1/1:1,21:22:57.19:911,57,0	1/1:0,46:46:99:2110,132,0	1/1:0,23:23:63.21:1007,63,0	1/1:2,22:24:66.22:1044,66,0	1/1:1,31:31:84.29:1343,84,0	1/1:0,1:1:3.01:48,3,0
chr10	42533332	.	TC	T	760.31	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.356;DP=661;FS=1.688;HRun=3;HaplotypeScore=62.6365;InbreedingCoeff=0.9694;MQ=87.25;MQ0=0;MQRankSum=-1.679;QD=30.41;ReadPosRankSum=0.629;VQSLOD=3.4205;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,126,1714	0/0:5,0:5:15.05:0,15,215	0/0:28,0:28:83.27:0,83,1091	0/0:18,0:18:48.10:0,48,638	0/0:36,0:36:99:0,105,1492	0/0:25,0:25:75.23:0,75,1044	0/0:22,0:22:60.20:0,60,863	0/0:25,0:25:72.21:0,72,985	0/0:14,0:14:42.12:0,42,585	0/0:36,0:36:96.22:0,96,1310	0/0:20,0:20:60.19:0,60,839	0/0:21,0:21:60.19:0,60,842	0/0:21,0:21:57.18:0,57,802	0/0:16,0:16:48.16:0,48,691	0/0:24,0:24:69.20:0,69,972	0/0:16,0:16:48.15:0,48,673	1/1:1,24:25:69.22:855,69,0	0/0:18,0:18:54.18:0,54,770	0/0:25,0:25:72.17:0,72,963	0/0:29,0:29:84.25:0,84,1157	0/0:31,0:31:84.24:0,84,1154	0/0:20,0:20:57.16:0,57,779	0/0:27,0:27:78.25:0,78,1105	0/0:28,0:28:84.23:0,84,1168	0/0:28,0:28:78.24:0,78,1102	0/0:30,0:30:90.30:0,90,1295	0/0:24,0:23:43.90:0,44,923	0/0:5,0:5:15.05:0,15,213
chr10	42534360	.	G	GT	1401.49	PASS	AB=0.529;AC=5;AF=0.089;AN=56;BaseQRankSum=-8.803;DP=600;FS=4.464;HRun=8;HaplotypeScore=57.4325;InbreedingCoeff=0.8661;MQ=74.90;MQ0=0;MQRankSum=-0.271;QD=28.03;ReadPosRankSum=2.762;VQSLOD=4.2823;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,102,918	0/0:4,0:4:12.01:0,12,110	0/0:16,0:16:9.99:0,10,197	0/0:14,0:14:24.91:0,25,223	0/0:29,0:29:81.04:0,81,741	1/1:1,21:22:63.19:727,63,0	0/1:1,8:9:0.39:250,0,0	0/0:33,0:33:78.02:0,78,714	1/1:1,18:19:48.14:554,48,0	0/0:29,0:29:66.03:0,66,608	0/0:20,0:20:54.01:0,54,489	0/0:17,0:17:51.01:0,51,462	0/0:13,0:13:36.02:0,36,329	0/0:15,0:15:39.01:0,39,353	0/0:28,0:28:78.04:0,78,714	0/0:22,0:22:60:0,60,539	0/0:2,0:24:42.78:0,43,125	0/0:20,0:20:38.99:0,39,350	0/0:23,0:23:57:0,57,513	0/0:36,0:36:99:0,99,897	0/0:14,0:14:42.02:0,42,384	0/0:24,0:24:72.04:0,72,659	0/0:25,0:25:57:0,57,515	0/0:23,0:23:63.01:0,63,570	0/0:20,0:20:60.03:0,60,549	0/0:27,0:27:63.02:0,63,577	0/0:27,0:27:78.04:0,78,714	0/0:9,0:9:27.01:0,27,247
chr10	42535200	.	ACT	A	289.30	PASS	AB=0.913;AC=15;AF=0.288;AN=52;BaseQRankSum=3.882;DP=583;FS=4.996;HRun=0;HaplotypeScore=70.8273;InbreedingCoeff=0.2511;MQ=70.50;MQ0=4;MQRankSum=1.144;QD=1.33;ReadPosRankSum=2.081;VQSLOD=1.1925;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:7.56:0,8,71	0/0:12,0:12:5.99:0,6,68	./.	0/0:39,0:26:0:0,0,0	1/1:20,0:20:2.84:14,3,0	0/0:15,0:15:6.89:0,7,70	0/0:21,0:22:9.97:0,10,257	0/0:38,0:38:3.02:0,3,6	0/0:20,0:20:15.02:0,15,178	0/0:16,0:17:10.27:0,10,110	0/0:21,0:21:12.02:0,12,139	0/0:9,0:17:9.01:0,9,95	0/0:11,0:21:6.01:0,6,69	0/0:12,0:13:3:0,3,26	0/0:24,0:24:14.51:0,15,145	0/1:20,1:21:14.14:14,0,145	0/1:19,1:20:22.22:22,0,217	0/1:11,3:15:43.26:93,0,43	1/1:16,2:18:5.80:46,6,0	1/1:18,1:19:3.01:32,3,0	1/1:26,3:29:3:32,3,0	0/0:26,0:26:9.01:0,9,93	0/0:17,0:17:6.01:0,6,68	0/1:20,1:20:5.09:5,0,279	0/0:14,0:14:6.01:0,6,69	0/1:20,0:21:18.95:36,0,19	1/1:28,4:30:14.87:142,15,0	./.
chr10	42535751	.	A	AGATAGATTGATT	14822.28	PASS	AB=1.000;AC=46;AF=0.821;AN=56;BaseQRankSum=4.235;DP=623;FS=0.000;HRun=0;HaplotypeScore=252.4835;InbreedingCoeff=0.2348;MQ=60.39;MQ0=7;MQRankSum=-4.011;QD=25.64;ReadPosRankSum=-3.013;VQSLOD=3.3650;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:37,0:38:94.41:1493,94,0	1/1:10,0:10:16.32:224,16,0	0/0:22,0:15:45.14:0,45,911	0/0:23,0:20:53.45:0,53,953	1/1:34,0:34:40.19:325,40,0	1/1:20,0:19:54.12:843,54,0	1/1:12,0:11:27.09:385,27,0	1/1:35,0:33:87.57:1424,88,0	1/1:24,0:24:57.16:1034,57,0	1/1:25,0:25:27.83:558,28,0	1/1:7,0:23:44.29:342,44,0	0/1:11,0:11:99:177,0,177	0/1:23,0:23:99:495,0,526	0/1:17,0:17:99:415,0,397	1/1:15,0:15:21.32:236,21,0	1/1:16,0:16:20.52:395,21,0	1/1:14,0:14:24.20:364,24,0	1/1:9,0:9:3.58:109,4,0	1/1:23,0:21:51.13:1008,51,0	1/1:19,0:19:52.39:835,52,0	1/1:15,0:15:40.36:675,40,0	0/1:24,0:24:77.67:78,0,525	0/1:35,0:35:99:202,0,865	0/1:17,0:17:43.86:44,0,332	1/1:42,0:42:48.90:661,49,0	1/1:4,0:31:73.37:1368,73,0	1/1:0,21:30:5.96:368,6,0	1/1:16,0:16:48.14:765,48,0
chr10	42535780	.	AATTG	A	2010.62	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=5.603;DP=591;FS=6.932;HRun=0;HaplotypeScore=145.8871;InbreedingCoeff=0.9949;MQ=69.11;MQ0=0;MQRankSum=-7.172;QD=37.23;ReadPosRankSum=1.557;VQSLOD=3.8602;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:93.26:0,93,2144	1/1:0,10:10:26.76:409,27,0	0/0:23,0:22:53.50:0,54,1099	0/0:24,0:21:48.15:0,48,1005	0/0:19,0:19:45.09:0,45,1014	1/1:1,16:17:39.13:675,39,0	1/1:2,8:10:18.06:305,18,0	0/0:30,0:30:66.23:0,66,1566	1/1:2,15:17:45.15:781,45,0	0/0:25,0:25:72.25:0,72,1787	0/0:23,0:23:48.09:0,48,1105	0/0:10,0:10:30.09:0,30,690	0/0:23,0:23:66.23:0,66,1656	0/0:17,0:17:48.13:0,48,1104	0/0:18,0:18:54.10:0,54,1281	0/0:15,0:15:42.14:0,42,1055	0/0:14,0:14:39.13:0,39,1004	0/0:15,0:15:39.13:0,39,1005	0/0:15,0:13:33.06:0,33,790	0/0:22,0:22:63.19:0,63,1529	0/0:21,0:21:54.19:0,54,1382	0/0:25,0:25:66.21:0,66,1586	0/0:31,0:31:78.27:0,78,1923	0/0:19,0:19:54.18:0,54,1291	0/0:35,0:35:81.28:0,81,2086	0/0:29,0:29:81.24:0,81,1978	0/0:26,0:26:18.06:0,18,459	0/0:24,0:24:63.22:0,63,1566
chr10	42536557	.	A	ATGTGTGTGTG	8545.19	PASS	AB=1.000;AC=46;AF=0.885;AN=52;BaseQRankSum=0.713;DP=474;FS=6.848;HRun=0;HaplotypeScore=169.5324;InbreedingCoeff=0.3386;MQ=52.19;MQ0=8;MQRankSum=0.947;QD=21.20;ReadPosRankSum=1.649;VQSLOD=3.6840;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:23:12.04:369,12,0	1/1:2,0:4:3.01:118,3,0	0/0:23,0:10:3.01:0,3,89	0/0:35,0:18:3.01:0,3,61	1/1:20,0:19:18.53:451,19,0	1/1:22,0:21:5.97:225,6,0	0/1:24,0:24:2.78:419,0,3	1/1:26,0:26:13.86:378,14,0	1/1:17,0:19:19.58:706,20,0	1/1:15,0:15:18.06:539,18,0	1/1:16,0:13:6.02:185,6,0	1/1:14,1:17:6.02:239,6,0	1/1:8,3:12:12.04:593,12,0	1/1:13,2:18:6.02:199,6,0	1/1:20,0:20:15.05:392,15,0	1/1:14,0:15:5.97:149,6,0	1/1:16,0:16:12.04:364,12,0	1/1:12,0:12:9.03:211,9,0	1/1:18,0:18:8.39:187,8,0	./.	0/1:14,0:14:0.05:0,0,0	1/1:6,4:10:9.03:437,9,0	1/1:7,0:9:2.93:49,3,0	1/1:7,1:8:9.01:305,9,0	1/1:11,0:9:6.02:104,6,0	1/1:24,0:24:26.45:837,26,0	1/1:22,0:24:32.95:1087,33,0	./.
chr10	42537247	.	G	GTATA	4248.60	PASS	AB=0.786;AC=23;AF=0.426;AN=54;BaseQRankSum=-0.033;DP=464;FS=4.649;HRun=0;HaplotypeScore=96.0761;InbreedingCoeff=0.8426;MQ=56.67;MQ0=1;MQRankSum=-3.058;QD=26.23;ReadPosRankSum=0.001;VQSLOD=4.4059;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:63.22:0,63,1088	1/1:0,10:11:24.08:606,24,0	1/1:7,0:5:2.22:7,2,0	0/0:3,0:2:3.01:0,3,52	1/1:10,0:22:8.06:112,8,0	1/1:4,7:11:15.05:379,15,0	1/1:2,3:8:14.41:189,14,0	0/0:27,0:27:45.13:0,45,726	1/1:2,12:15:33.11:810,33,0	1/1:5,0:14:33.10:572,33,0	1/1:7,0:12:9.03:159,9,0	0/0:15,0:15:39.13:0,39,669	0/0:21,0:22:57.17:0,57,933	0/0:22,0:21:54.17:0,54,891	1/1:8,0:16:15.05:264,15,0	1/1:4,10:16:32.90:744,33,0	./.	0/1:8,0:10:32.74:141,0,33	0/0:18,0:16:42.11:0,42,694	0/0:18,0:18:48.15:0,48,786	0/0:20,0:21:54.16:0,54,880	0/0:16,0:16:17.15:0,17,644	0/0:26,0:26:69.20:0,69,1123	0/0:19,0:19:54.18:0,54,927	1/1:6,0:13:15.05:264,15,0	0/0:23,0:22:60.09:0,60,971	0/0:18,0:18:51.16:0,51,843	0/0:13,0:13:39.12:0,39,626
chr10	42537256	.	TATAC	T	35.85	PASS	AB=0.931;AC=5;AF=0.089;AN=56;BaseQRankSum=3.700;DP=445;FS=10.587;HRun=0;HaplotypeScore=106.0885;InbreedingCoeff=0.2177;MQ=57.07;MQ0=1;MQRankSum=-1.573;QD=0.92;ReadPosRankSum=-0.297;VQSLOD=1.4223;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,1:23:66.21:0,66,1782	0/0:11,0:11:26.12:0,26,484	0/1:4,0:3:3.55:4,0,68	0/0:3,0:2:5.85:0,6,97	0/0:21,0:19:14.90:0,15,239	0/0:11,0:11:24.07:0,24,421	0/0:9,0:9:18.04:0,18,322	0/0:25,0:25:75.19:0,75,1628	0/0:14,0:14:36.11:0,36,681	0/0:12,0:12:36.08:0,36,620	0/0:14,0:12:15.02:0,15,226	0/0:16,0:16:42.13:0,42,1113	0/0:22,0:22:65.67:0,66,1589	0/0:20,0:20:60.17:0,60,1541	0/0:16,0:16:21.04:0,21,345	0/0:18,0:18:45.11:0,45,786	1/1:10,0:9:2.98:22,3,0	0/1:10,1:9:37.43:37,0,191	0/0:14,0:14:42.14:0,42,1171	0/0:18,0:18:51.16:0,51,1362	0/0:21,0:21:63.08:0,63,1506	0/0:17,0:17:45.06:0,45,1248	0/0:26,0:26:75.22:0,75,1930	0/0:22,0:22:66.17:0,66,1646	0/0:11,0:11:15.05:0,15,296	0/0:24,0:23:69:0,69,1669	0/0:18,0:18:54.19:0,54,1491	0/1:12,2:14:77.54:78,0,902
chr10	42537261	.	A	ATATATATATATG	419.06	PASS	AB=1.000;AC=7;AF=0.130;AN=54;BaseQRankSum=6.981;DP=448;FS=0.000;HRun=0;HaplotypeScore=164.9748;InbreedingCoeff=0.1117;MQ=57.58;MQ0=1;MQRankSum=-6.644;QD=5.37;ReadPosRankSum=-0.875;VQSLOD=2.5671;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:69.24:0,69,2586	0/0:13,0:13:30.10:0,30,504	0/0:4,0:3:6.01:0,6,77	0/0:3,0:2:6.02:0,6,149	0/1:21,0:19:60.22:60,0,145	0/0:11,0:11:24.08:0,24,417	0/0:10,0:10:17.76:0,18,418	0/0:27,0:27:78.23:0,78,2236	0/0:15,0:15:33.08:0,33,555	0/1:12,0:12:92.29:92,0,201	0/1:13,0:11:28.95:29,0,159	0/0:14,0:14:42.13:0,42,1452	0/0:21,0:21:63.22:0,63,2307	0/0:19,0:19:57.18:0,57,2000	0/1:13,0:13:99:141,0,129	0/0:16,0:16:13.97:0,14,671	./.	0/1:9,0:7:64.26:99,0,64	0/0:16,0:16:48.12:0,48,1643	0/0:18,0:18:51.16:0,51,1758	0/0:22,0:22:63.22:0,63,2217	0/0:16,0:16:44.92:0,45,1618	0/0:27,0:27:75.20:0,75,2531	0/0:22,0:22:66.23:0,66,2251	1/1:10,0:10:7.44:127,7,0	0/0:24,0:23:69.23:0,69,2270	0/0:21,0:21:60.19:0,60,2028	0/0:14,0:14:42.14:0,42,1439
chr10	42540197	.	ATTCTTTGTATAGTCC	A	9283.51	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=13.090;DP=591;FS=11.380;HRun=0;HaplotypeScore=226.1049;InbreedingCoeff=0.9873;MQ=55.24;MQ0=12;MQRankSum=-11.943;QD=87.58;ReadPosRankSum=2.418;VQSLOD=3.1623;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:93.32:0,93,6319	0/0:13,0:12:36.12:0,36,2559	0/0:21,0:12:27.09:0,27,1551	0/0:20,0:15:42.14:0,42,2478	1/1:4,16:20:39.13:1670,39,0	0/0:16,0:16:45.15:0,45,3161	0/0:19,0:19:45.13:0,45,2472	0/0:31,0:27:75.24:0,75,4579	0/0:14,0:14:42.14:0,42,3071	1/1:4,21:25:60.21:2638,60,0	1/1:2,18:20:54.19:2237,54,0	0/0:18,0:18:54.17:0,54,3535	0/0:17,0:17:45.15:0,45,3292	0/0:18,0:18:51.18:0,51,3675	1/1:2,15:16:30.10:1349,30,0	0/0:25,0:25:66.23:0,66,4533	0/0:30,0:30:87.26:0,87,5626	1/1:1,9:9:9.03:337,9,0	0/0:25,0:14:42.10:0,42,2673	0/0:33,0:33:99:0,99,7010	0/0:19,0:19:57.20:0,57,4068	0/0:25,0:25:75.26:0,75,5233	0/0:29,0:29:81.28:0,81,5349	0/0:13,0:13:36.12:0,36,2489	1/1:4,10:14:24.08:1052,24,0	0/0:19,0:19:57.20:0,57,4199	0/0:29,0:29:87.28:0,87,5589	0/0:16,0:16:48.16:0,48,3450
chr10	42540882	.	ATG	A	8969.37	PASS	AB=0.571;AC=20;AF=0.357;AN=56;BaseQRankSum=13.045;DP=614;FS=2.875;HRun=0;HaplotypeScore=73.0830;InbreedingCoeff=0.8442;MQ=52.28;MQ0=25;MQRankSum=1.748;QD=37.53;ReadPosRankSum=3.275;VQSLOD=7.2139;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:23:42.14:0,42,851	1/1:0,14:14:39.09:599,39,0	0/0:3,0:1:2.04:0,2,6	0/0:6,0:3:9:0,9,134	1/1:2,24:25:66.22:1011,66,0	1/1:1,27:27:63.21:1015,63,0	1/1:2,24:21:48.16:783,48,0	0/0:42,0:35:99:0,102,1959	1/1:0,20:20:45.15:723,45,0	1/1:2,28:27:81.28:1317,81,0	1/1:0,28:28:75.13:1126,75,0	0/0:18,0:18:48.16:0,48,950	0/0:21,0:20:54.02:0,54,955	0/0:21,0:21:54.15:0,54,972	1/1:0,16:16:42.14:677,42,0	1/1:1,11:11:27.09:440,27,0	0/0:23,0:21:45.15:0,45,913	0/1:7,10:16:67.74:407,0,68	0/0:27,0:17:51.18:0,51,1020	0/0:34,0:33:93.22:0,93,1838	0/0:25,0:24:54.06:0,54,1033	0/0:38,0:37:96.32:0,96,1891	0/0:13,0:12:33.11:0,33,654	0/0:16,0:16:48.16:0,48,942	0/1:1,21:22:0.47:870,0,0	0/0:23,1:22:17.27:0,17,1222	0/0:34,0:33:87.30:0,87,1765	0/0:4,0:4:12.04:0,12,244
chr10	42542215	.	C	CT	1020.92	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-6.574;DP=600;FS=3.091;HRun=8;HaplotypeScore=57.5134;InbreedingCoeff=0.9915;MQ=61.94;MQ0=2;MQRankSum=-0.406;QD=26.18;ReadPosRankSum=0.094;VQSLOD=4.3723;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:40,1:41:79.41:0,79,976	1/1:0,10:10:30.09:346,30,0	0/0:21,0:13:32.63:0,33,275	0/0:17,0:13:27.87:0,28,243	0/0:33,0:32:78.04:0,78,714	0/0:17,0:17:51.03:0,51,467	0/0:18,0:18:45.01:0,45,407	0/0:37,0:37:99:0,101,894	0/0:21,0:21:45.02:0,45,412	0/0:33,0:32:84.03:0,84,766	0/0:21,0:21:48.02:0,48,439	0/0:12,0:12:33.02:0,33,302	0/0:15,0:16:44.06:0,44,390	0/0:10,0:10:27.01:0,27,247	0/0:15,0:15:42.02:0,42,384	0/0:7,0:7:18:0,18,164	1/1:3,26:29:69.21:796,69,0	0/0:21,0:21:53.88:0,54,476	0/0:24,0:23:54.02:0,54,491	0/0:25,0:25:66.02:0,66,599	0/0:9,0:9:27.01:0,27,247	0/0:20,0:20:37.21:0,37,470	0/0:29,0:29:72.04:0,72,659	0/0:27,0:27:66.02:0,66,604	0/0:30,0:29:60.02:0,60,549	0/0:24,0:24:45.08:0,45,556	0/0:20,0:20:45.01:0,45,411	0/0:13,0:13:20.87:0,21,175
chr10	42543663	.	TG	T	823.33	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.101;DP=794;FS=5.360;HRun=1;HaplotypeScore=75.2701;InbreedingCoeff=0.9969;MQ=82.35;MQ0=0;MQRankSum=-3.294;QD=37.42;ReadPosRankSum=0.525;VQSLOD=4.1432;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:59,0:59:99:0,178,2798	0/0:10,0:10:30.10:0,30,480	0/0:34,0:34:99:0,102,1593	0/0:27,0:25:60.22:0,60,1067	0/0:26,0:26:78.27:0,78,1247	0/0:27,0:27:78.27:0,78,1245	0/0:25,0:25:75.24:0,75,1173	0/0:32,0:32:96.31:0,96,1508	0/0:24,0:24:72.25:0,72,1151	0/0:32,0:32:96.33:0,96,1532	0/0:25,0:25:75.26:0,75,1188	0/0:29,0:29:87.28:0,87,1364	0/0:40,0:40:99:0,120,1904	0/0:32,0:32:96.33:0,96,1533	0/0:40,0:40:99:0,120,1892	0/0:26,0:26:78.27:0,78,1241	1/1:0,22:22:66.22:918,66,0	0/0:11,0:11:30.08:0,30,456	0/0:24,0:24:72.21:0,72,1098	0/0:36,0:36:99:0,108,1724	0/0:51,0:51:99:0,151,2386	0/0:26,0:26:75.24:0,75,1173	0/0:16,0:16:45.15:0,45,716	0/0:35,0:35:99:0,102,1624	0/0:18,0:17:54.17:0,54,841	0/0:26,0:26:78.27:0,78,1246	0/0:32,0:32:96.33:0,96,1534	0/0:9,0:9:24.01:0,24,320
chr10	42544973	.	GCA	G	2230.86	PASS	AB=0.844;AC=31;AF=0.574;AN=54;BaseQRankSum=3.088;DP=527;FS=2.203;HRun=0;HaplotypeScore=125.9192;InbreedingCoeff=0.2445;MQ=66.20;MQ0=9;MQRankSum=-2.270;QD=6.47;ReadPosRankSum=0.586;VQSLOD=3.1108;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:31:10.12:127,10,0	1/1:4,6:10:14.23:164,14,0	./.	0/0:33,0:19:0:0,0,0	0/1:9,0:13:18.11:18,0,124	0/0:23,0:23:8.21:0,8,72	0/0:17,0:29:11.91:0,12,92	0/1:22,0:21:0:0,0,0	0/0:15,0:13:17.16:0,17,124	0/1:12,4:16:99:109,0,137	0/1:9,1:10:27.11:27,0,39	1/1:11,8:20:23.90:246,24,0	0/1:12,7:22:8.14:160,0,8	1/1:9,11:22:26.91:279,27,0	0/1:15,0:15:9.10:9,0,269	1/1:11,0:19:22.73:112,23,0	1/1:7,19:27:56.82:592,57,0	0/0:14,0:14:26.96:0,27,311	1/1:9,0:16:17.47:83,17,0	1/1:9,0:16:14.20:70,14,0	0/0:26,0:25:2.68:0,3,11	1/1:11,4:17:9.02:99,9,0	0/1:10,2:14:30.31:96,0,30	0/1:15,6:21:30.13:118,0,30	0/0:15,1:16:1.06:0,1,148	1/1:14,0:19:8.99:43,9,0	1/1:2,0:7:8.42:42,8,0	0/1:3,0:6:8.16:8,0,16
chr10	42545550	.	C	CA	734.84	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-7.371;DP=586;FS=3.762;HRun=9;HaplotypeScore=58.9743;InbreedingCoeff=0.8971;MQ=87.97;MQ0=0;MQRankSum=-4.475;QD=25.34;ReadPosRankSum=0.701;VQSLOD=4.4437;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:86.97:0,87,755	0/0:4,0:4:6:0,6,52	0/0:26,0:26:62.94:0,63,541	0/0:20,0:21:31.78:0,32,261	0/0:21,0:21:56.97:0,57,491	0/0:22,0:22:62.98:0,63,547	0/0:14,0:14:38.99:0,39,339	0/0:27,0:27:74.97:0,75,649	0/0:19,0:20:56.02:0,56,475	0/0:28,0:28:71.96:0,72,622	0/0:19,0:19:44.97:0,45,391	0/0:10,0:10:26.96:0,27,230	0/0:18,0:18:41.98:0,42,365	0/0:20,0:21:41.94:0,42,365	0/0:9,0:9:23.97:0,24,205	0/0:17,0:17:29.94:0,30,257	1/1:1,28:29:75.20:830,75,0	0/0:14,0:14:38.99:0,39,339	0/0:21,1:22:20.79:0,21,409	0/0:22,0:22:53.94:0,54,461	0/0:28,0:29:74.96:0,75,647	0/0:25,0:25:56.98:0,57,495	0/0:23,0:23:62.95:0,63,543	0/0:20,0:20:59.99:0,60,521	0/0:30,0:30:74.97:0,75,651	0/0:25,0:25:59.98:0,60,521	0/0:29,0:29:77.98:0,78,677	0/0:9,0:9:26.99:0,27,234
chr10	42548078	.	AGT	A	1944.62	PASS	AB=0.899;AC=22;AF=0.393;AN=56;BaseQRankSum=8.353;DP=646;FS=14.228;HRun=0;HaplotypeScore=89.4158;InbreedingCoeff=0.1384;MQ=71.20;MQ0=10;MQRankSum=-0.138;QD=5.02;ReadPosRankSum=3.006;VQSLOD=1.3113;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:54.08:0,54,746	0/0:10,0:10:21.06:0,21,301	0/1:55,0:31:3.01:3,0,55	0/0:48,0:24:3.18:0,3,21	1/1:12,11:23:29.82:319,30,0	0/1:12,1:15:9.98:10,0,276	0/1:15,4:19:12.94:13,0,255	0/1:19,0:19:5.76:6,0,223	0/0:23,2:25:17.11:0,17,678	0/0:24,0:24:36.10:0,36,481	0/1:7,1:8:25.01:25,0,79	0/0:15,0:16:10.83:0,11,292	0/1:14,3:18:21.09:21,0,280	0/1:14,3:18:69.08:69,0,294	1/1:6,15:23:47.80:505,48,0	0/1:19,2:21:0.97:1,0,385	1/1:10,0:28:42.20:209,42,0	1/1:7,13:20:31.27:371,31,0	0/0:15,0:13:18.02:0,18,215	0/0:12,0:13:6.94:0,7,258	0/1:41,8:50:99:203,0,576	0/0:16,0:16:18.06:0,18,269	0/1:11,1:12:10.05:10,0,250	0/0:31,2:33:22.97:0,23,740	1/1:8,10:20:26.15:295,26,0	0/0:15,0:14:21.07:0,21,322	0/1:26,4:30:50.97:51,0,593	0/1:6,1:7:15.99:16,0,192
chr10	42548394	.	GT	G	1223.01	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.503;DP=621;FS=2.273;HRun=1;HaplotypeScore=73.6169;InbreedingCoeff=0.9767;MQ=91.52;MQ0=0;MQRankSum=-4.899;QD=34.94;ReadPosRankSum=1.254;VQSLOD=3.7777;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,34:35:76.55:1318,77,0	0/0:6,0:6:18.06:0,18,288	0/0:37,0:37:99:0,111,1683	0/0:27,0:27:75.25:0,75,1187	0/0:28,0:28:78.74:0,79,1241	0/0:19,0:19:57.18:0,57,887	0/0:13,0:13:39.13:0,39,620	0/0:24,0:24:55.26:0,55,1086	0/0:26,0:26:78.22:0,78,1172	0/0:20,0:20:60.20:0,60,947	0/0:24,0:24:69.20:0,69,1050	0/0:17,0:17:51.14:0,51,767	0/0:18,0:18:54.18:0,54,861	0/0:28,0:28:84.29:0,84,1336	0/0:22,0:22:66.23:0,66,1052	0/0:17,0:17:51.17:0,51,815	0/0:24,0:24:72.23:0,72,1126	0/0:15,0:15:42.14:0,42,671	0/0:26,0:26:75.22:0,75,1171	0/0:21,0:21:63.17:0,63,936	0/0:24,0:24:72.22:0,72,1126	0/0:22,0:22:66.20:0,66,1026	0/0:20,0:20:54.16:0,54,834	0/0:28,0:28:81.28:0,81,1291	0/0:29,0:29:87.27:0,87,1360	0/0:18,0:18:51.14:0,51,750	0/0:28,0:28:84.29:0,84,1328	0/0:5,0:5:15.05:0,15,239
chr10	42549154	.	AC	A	10511.63	PASS	AC=52;AF=0.963;AN=54;BaseQRankSum=-2.956;DP=343;FS=0.000;HRun=4;HaplotypeScore=35.3688;InbreedingCoeff=0.8624;MQ=57.97;MQ0=2;MQRankSum=-0.936;QD=32.85;ReadPosRankSum=1.871;VQSLOD=4.6474;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,22:25:66.20:792,66,0	1/1:0,4:4:12.04:144,12,0	./.	0/0:9,3:3:8.99:0,9,84	1/1:3,16:19:54.17:648,54,0	1/1:0,11:11:33.10:396,33,0	1/1:0,8:8:18.06:216,18,0	1/1:1,13:14:21.06:252,21,0	1/1:1,12:13:36.11:431,36,0	1/1:0,9:9:27.08:323,27,0	1/1:1,9:10:27.08:322,27,0	1/1:1,9:10:30.09:360,30,0	1/1:1,12:13:39.12:468,39,0	1/1:0,8:8:24.07:288,24,0	1/1:1,10:11:30.09:360,30,0	1/1:0,14:14:42.13:504,42,0	1/1:0,20:20:54.17:648,54,0	1/1:1,8:9:24.07:288,24,0	1/1:1,6:7:18.03:203,18,0	1/1:1,12:13:39.11:456,39,0	1/1:1,12:13:36.11:432,36,0	1/1:0,15:15:45.14:540,45,0	1/1:1,7:8:21.06:252,21,0	1/1:0,20:20:54.17:648,54,0	1/1:1,10:11:33.10:395,33,0	1/1:0,7:7:21.06:252,21,0	1/1:1,20:21:60.18:715,60,0	1/1:1,5:6:15.05:180,15,0
chr10	42549249	.	TA	T	6222.91	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-0.926;DP=444;FS=58.598;HRun=11;HaplotypeScore=63.2243;InbreedingCoeff=0.8700;MQ=62.83;MQ0=2;MQRankSum=-2.013;QD=14.40;ReadPosRankSum=3.443;VQSLOD=0.6057;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,26:29:71.90:591,72,0	1/1:0,0:9:18.33:54,18,0	0/0:8,0:8:7.28:0,7,135	0/0:3,0:3:8.95:0,9,74	1/1:3,19:22:56.93:468,57,0	1/1:2,18:20:50.94:419,51,0	1/1:2,11:13:26.96:222,27,0	1/1:4,0:23:31.28:95,31,0	1/1:1,16:17:47.94:394,48,0	1/1:3,13:16:9.95:288,10,0	1/1:3,14:17:12.94:313,13,0	1/1:2,15:17:44.94:369,45,0	1/1:1,10:10:23.97:197,24,0	1/1:0,10:10:29.97:246,30,0	1/1:0,17:17:44.95:369,45,0	1/1:1,0:9:17.25:65,17,0	1/1:3,1:14:23.37:85,23,0	1/1:0,11:11:29.97:246,30,0	1/1:2,0:14:21.68:63,22,0	1/1:4,0:31:46.83:135,47,0	1/1:1,0:14:24.44:71,24,0	1/1:0,15:15:41.95:345,42,0	1/1:3,15:17:24.40:324,24,0	1/1:3,11:14:32.95:271,33,0	1/1:2,14:16:35.95:296,36,0	1/1:3,1:24:41.69:136,42,0	1/1:2,0:17:30.55:88,31,0	1/1:2,0:14:25.39:73,25,0
chr10	42549423	.	A	AG	1271.89	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-7.772;DP=663;FS=5.458;HRun=3;HaplotypeScore=64.8138;InbreedingCoeff=0.9643;MQ=86.78;MQ0=0;MQRankSum=-4.006;QD=33.47;ReadPosRankSum=0.646;VQSLOD=4.0295;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,120,1426	1/1:1,3:4:9.03:126,9,0	0/0:19,0:19:33.85:0,34,514	0/0:27,0:27:66.38:0,66,709	0/0:21,0:21:57.17:0,57,684	0/0:24,0:24:69.21:0,69,828	0/0:33,0:33:87:0,87,1043	0/0:40,0:40:99:0,105,1232	0/0:30,0:30:87.27:0,87,1043	0/0:24,0:24:69.21:0,69,828	0/0:15,0:15:39.08:0,39,442	0/0:27,0:27:78.24:0,78,936	0/0:20,0:20:60.18:0,60,720	0/0:22,0:22:66.20:0,66,792	0/0:29,0:29:81.25:0,81,972	0/0:17,0:17:51.16:0,51,612	1/1:2,32:34:90.30:1260,90,0	0/0:13,0:13:39.12:0,39,467	0/0:26,0:26:75.21:0,75,886	0/0:13,0:13:36.11:0,36,432	0/0:41,0:41:99:0,120,1408	0/0:15,0:15:39.11:0,39,457	0/0:9,0:9:27.04:0,27,308	0/0:33,0:33:93.27:0,93,1103	0/0:16,0:16:45.14:0,45,540	0/0:36,0:36:99:0,102,1215	0/0:27,0:27:81.23:0,81,960	0/0:6,0:6:18.06:0,18,216
chr10	42550419	.	A	AG	1301.55	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=0.397;DP=710;FS=4.249;HRun=2;HaplotypeScore=70.7610;InbreedingCoeff=0.9933;MQ=89.81;MQ0=0;MQRankSum=-3.211;QD=35.18;ReadPosRankSum=2.074;VQSLOD=4.2566;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,108,1338	1/1:0,12:12:27.09:386,27,0	0/0:28,0:28:77.05:0,77,924	0/0:25,0:25:66.16:0,66,776	0/0:29,0:29:84.26:0,84,1041	0/0:24,0:24:69.22:0,69,855	0/0:26,0:26:75.22:0,75,916	0/0:30,0:30:78.23:0,78,946	0/0:29,0:29:87.27:0,87,1078	0/0:25,0:25:66.20:0,66,808	0/0:18,0:18:51.16:0,51,632	0/0:29,0:29:87.27:0,87,1078	0/0:34,0:34:77.14:0,77,1133	0/0:21,0:21:57.17:0,57,694	0/0:33,0:33:96.30:0,96,1190	0/0:20,0:20:60.19:0,60,744	1/1:0,25:25:72.24:1037,72,0	0/0:8,0:8:21.07:0,21,260	0/0:23,0:23:54.17:0,54,669	0/0:29,0:29:72.22:0,72,892	0/0:32,0:32:93.28:0,93,1140	0/0:29,0:29:84.26:0,84,1040	0/0:20,0:20:60.18:0,60,728	0/0:18,0:18:54.15:0,54,656	0/0:28,0:28:68.67:0,69,854	0/0:35,0:35:99:0,105,1291	0/0:37,0:37:99:0,108,1338	0/0:6,0:6:18.06:0,18,223
chr10	42551305	.	AGT	A	487.60	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.939;DP=654;FS=1.738;HRun=0;HaplotypeScore=85.1688;InbreedingCoeff=0.9989;MQ=85.52;MQ0=0;MQRankSum=-7.142;QD=21.20;ReadPosRankSum=-0.306;VQSLOD=3.9721;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,22:23:49.94:582,50,0	0/0:14,0:14:42.14:0,42,842	0/0:30,0:30:54.29:0,54,1625	0/0:21,0:21:63.22:0,63,1252	0/0:20,0:20:60.19:0,60,1143	0/0:18,0:18:54.19:0,54,1072	0/0:22,0:22:66.23:0,66,1341	0/0:35,0:35:99:0,105,2040	0/0:16,0:16:48.14:0,48,937	0/0:27,0:27:81.28:0,81,1642	0/0:17,0:17:51.17:0,51,1006	0/0:27,0:27:81.26:0,81,1540	0/0:19,0:19:57.20:0,57,1157	0/0:25,0:25:72.25:0,72,1437	0/0:21,0:21:63.20:0,63,1244	0/0:14,0:14:42.14:0,42,831	0/0:27,0:27:81.25:0,81,1569	0/0:17,0:17:48.16:0,48,975	0/0:18,0:18:54.19:0,54,1064	0/0:33,0:33:99:0,99,1991	0/0:31,0:31:90.31:0,90,1829	0/0:31,0:31:93.30:0,93,1816	0/0:20,0:20:60.21:0,60,1217	0/0:28,0:27:84.27:0,84,1656	0/0:30,0:30:90.31:0,90,1800	0/0:30,0:30:90.29:0,90,1769	0/0:31,0:31:93.32:0,93,1876	0/0:9,0:9:27.09:0,27,548
chr10	42551308	.	CCCTG	C	799.30	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.729;DP=655;FS=2.902;HRun=0;HaplotypeScore=112.1336;InbreedingCoeff=0.9994;MQ=85.67;MQ0=0;MQRankSum=-7.645;QD=34.75;ReadPosRankSum=-0.553;VQSLOD=3.7356;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,22:23:63.21:894,63,0	0/0:14,0:14:42.14:0,42,1201	0/0:30,0:30:90.31:0,90,2500	0/0:22,0:22:66.23:0,66,1759	0/0:18,0:18:54.19:0,54,1560	0/0:18,0:18:54.19:0,54,1531	0/0:23,0:23:69.24:0,69,1950	0/0:32,0:32:96.32:0,96,2690	0/0:17,0:17:51.18:0,51,1467	0/0:27,0:27:81.28:0,81,2321	0/0:19,0:19:54.19:0,54,1521	0/0:26,0:26:78.27:0,78,2223	0/0:21,0:21:63.21:0,63,1674	0/0:24,0:24:72.25:0,72,2071	0/0:21,0:21:63.22:0,63,1789	0/0:13,0:13:39.13:0,39,1115	0/0:25,0:25:75.23:0,75,2018	0/0:17,0:17:48.16:0,48,1353	0/0:17,0:17:51.18:0,51,1461	0/0:33,0:33:99:0,99,2735	0/0:31,0:31:93.32:0,93,2657	0/0:31,0:31:93.30:0,93,2519	0/0:24,0:24:69.22:0,69,1857	0/0:27,0:26:81.28:0,81,2333	0/0:31,0:31:90.30:0,90,2505	0/0:28,0:28:84.29:0,84,2399	0/0:33,0:33:99:0,99,2691	0/0:10,0:10:30.10:0,30,850
chr10	42552059	.	G	GT	926.59	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=0.421;DP=578;FS=2.679;HRun=3;HaplotypeScore=56.3842;InbreedingCoeff=0.9984;MQ=80.78;MQ0=0;MQRankSum=-4.438;QD=34.32;ReadPosRankSum=0.429;VQSLOD=4.1305;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:54.15:0,54,635	1/1:1,9:10:27.09:378,27,0	0/0:19,0:17:42.03:0,42,453	0/0:22,0:21:50.36:0,50,545	0/0:28,0:28:78.23:0,78,926	0/0:26,0:26:75.23:0,75,900	0/0:18,0:18:54.13:0,54,615	0/0:44,0:44:99:0,111,1239	0/0:16,0:16:48.15:0,48,576	0/0:23,0:23:66.20:0,66,792	0/0:20,0:20:57.12:0,57,649	0/0:15,0:15:45.14:0,45,540	0/0:20,0:20:60.16:0,60,697	0/0:12,0:12:36.10:0,36,421	0/0:16,0:16:48.14:0,48,566	0/0:12,0:12:30.08:0,30,349	1/1:1,16:17:48.16:670,48,0	0/0:12,0:12:36.11:0,36,431	0/0:31,0:31:84.23:0,84,986	0/0:32,0:32:90.24:0,90,1047	0/0:10,0:10:27.08:0,27,324	0/0:21,0:21:63.15:0,63,722	0/0:19,0:19:54.17:0,54,647	0/0:19,0:19:54.15:0,54,636	0/0:34,0:34:99:0,99,1179	0/0:31,0:31:93.28:0,93,1106	0/0:22,0:21:63.15:0,63,729	0/0:11,0:11:33.10:0,33,394
chr10	42552878	.	CGTTTT	C	739.40	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.468;DP=542;FS=0.863;HRun=0;HaplotypeScore=132.3300;InbreedingCoeff=0.9381;MQ=78.94;MQ0=0;MQRankSum=-5.110;QD=28.44;ReadPosRankSum=3.059;VQSLOD=3.0843;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:76.07:0,76,1692	1/1:1,5:6:14.95:215,15,0	0/0:24,0:21:50.27:0,50,994	0/0:21,0:19:37.88:0,38,631	0/0:26,0:26:78.13:0,78,1923	0/0:26,0:26:66.04:0,66,1470	0/0:10,0:10:27.02:0,27,604	0/0:36,0:36:99:0,108,2312	0/0:16,0:16:48.09:0,48,1169	0/0:25,0:26:74.32:0,74,1344	0/0:24,0:24:72.15:0,72,1246	0/0:17,0:17:38.91:0,39,605	0/0:12,0:12:24.04:0,24,590	0/0:20,0:20:39.08:0,39,830	0/0:19,0:19:48.13:0,48,935	0/0:17,0:17:42.10:0,42,935	1/1:2,18:20:39.10:643,39,0	0/0:14,0:14:33.08:0,33,663	0/0:16,0:16:45.12:0,45,1051	0/0:23,0:23:65.95:0,66,1415	0/0:15,0:15:45.08:0,45,1033	0/0:12,0:12:32.98:0,33,582	0/0:28,0:28:66.06:0,66,1232	0/0:15,0:15:33.04:0,33,797	0/0:17,0:17:48.11:0,48,947	0/0:29,0:29:87.13:0,87,1785	0/0:24,0:25:75.03:0,75,1702	0/0:2,0:2:6.02:0,6,121
chr10	42552879	.	GT	G	1079.41	PASS	AB=0.619;AC=13;AF=0.232;AN=56;BaseQRankSum=-3.880;DP=572;FS=1.517;HRun=14;HaplotypeScore=106.9556;InbreedingCoeff=0.8268;MQ=75.58;MQ0=0;MQRankSum=-0.994;QD=8.64;ReadPosRankSum=5.727;VQSLOD=2.9578;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,2:27:10.89:0,11,348	1/1:6,0:6:8.10:23,8,0	0/0:21,2:19:7.57:0,8,182	0/0:22,0:18:21.93:0,22,136	0/0:23,0:26:51.85:0,52,420	0/0:12,0:28:43.17:0,43,256	0/0:5,0:11:15.92:0,16,89	0/0:14,0:38:62.65:0,63,357	0/0:6,0:15:34.53:0,35,204	0/1:10,15:26:37.70:205,0,38	1/1:7,14:23:45.41:291,45,0	0/0:11,0:20:17.36:0,17,97	0/0:5,0:14:24.40:0,24,130	0/0:4,0:19:27.12:0,27,132	1/1:4,15:19:38.67:267,39,0	0/0:4,0:18:31.35:0,31,161	1/1:20,0:20:26.47:76,26,0	1/1:3,11:14:29.73:205,30,0	0/0:6,0:17:29.16:0,29,160	0/0:8,0:28:52.76:0,53,283	0/0:11,0:15:36.51:0,37,225	0/0:5,0:16:29.35:0,29,157	0/0:10,0:31:41.38:0,41,242	0/0:2,0:16:25.57:0,26,129	1/1:6,11:17:7.68:194,8,0	0/0:22,0:31:49.57:0,50,280	0/0:18,0:28:47.27:0,47,246	0/0:4,0:4:6.68:0,7,34
chr10	42553225	.	AG	A	1244.86	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.997;DP=604;FS=2.177;HRun=1;HaplotypeScore=78.5484;InbreedingCoeff=0.9695;MQ=73.33;MQ0=0;MQRankSum=-3.520;QD=35.57;ReadPosRankSum=0.723;VQSLOD=3.7284;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:90.31:0,90,1429	1/1:1,7:8:24.08:323,24,0	0/0:14,0:14:39.03:0,39,507	0/0:15,0:15:32.48:0,32,472	0/0:42,0:42:99:0,114,976	0/0:34,0:34:94.86:0,95,1465	0/0:18,0:18:54.17:0,54,831	0/0:30,0:30:83.67:0,84,1292	0/0:18,0:18:54.15:0,54,809	0/0:28,0:28:80.90:0,81,674	0/0:24,0:24:68.87:0,69,559	0/0:25,0:25:75.23:0,75,1149	0/0:21,0:21:63.21:0,63,1003	0/0:23,0:23:69.20:0,69,1052	0/0:21,0:21:53.94:0,54,442	0/0:12,0:12:36.12:0,36,573	1/1:0,27:27:75.25:1043,75,0	0/0:21,0:21:53.90:0,54,438	0/0:14,0:14:42.13:0,42,649	0/0:23,0:23:69.24:0,69,1096	0/0:19,0:19:57.18:0,57,883	0/0:18,0:18:54.16:0,54,832	0/0:22,0:22:63.06:0,63,895	0/0:25,0:25:75.19:0,75,1096	0/0:17,0:17:44.94:0,45,366	0/0:27,0:27:78.25:0,78,1194	0/0:23,0:23:65.23:0,65,979	0/0:3,0:3:9.03:0,9,142
chr10	42553226	.	G	GT	4370.82	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-10.538;DP=607;FS=0.774;HRun=7;HaplotypeScore=68.3644;InbreedingCoeff=0.9844;MQ=72.59;MQ0=0;MQRankSum=0.936;QD=28.38;ReadPosRankSum=1.091;VQSLOD=5.5184;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:90.14:0,90,869	0/0:8,0:8:17.92:0,18,59	0/0:13,0:13:27.01:0,27,252	0/0:15,0:15:17.28:0,17,227	1/1:5,38:43:76.71:1084,77,0	0/0:33,0:34:86.17:0,86,817	0/0:19,0:19:48.07:0,48,463	0/0:30,0:31:77.15:0,77,730	0/0:18,0:18:48.08:0,48,463	1/1:4,23:27:69.21:830,69,0	1/1:2,22:24:63.19:753,63,0	0/0:25,0:25:69.10:0,69,661	0/0:21,0:21:63.10:0,63,608	0/0:23,0:23:63.10:0,63,608	1/1:1,20:21:51.16:616,51,0	0/0:13,0:13:36.06:0,36,348	0/0:27,0:27:55.51:0,56,173	1/1:1,21:22:51.16:616,51,0	0/0:13,0:13:39.06:0,39,377	0/0:23,0:23:69.11:0,69,666	0/0:20,0:20:54.08:0,54,522	0/0:18,0:18:51.08:0,51,492	0/0:22,0:22:57.06:0,57,539	0/0:25,0:25:63.08:0,63,602	1/1:2,15:17:39.12:471,39,0	0/0:27,0:27:72.10:0,72,689	0/0:23,0:23:57.08:0,57,550	0/0:3,0:3:9.01:0,9,87
chr10	42553463	.	TC	T	1159.52	PASS	AB=0.948;AC=24;AF=0.429;AN=56;BaseQRankSum=5.129;DP=434;FS=9.188;HRun=10;HaplotypeScore=75.9170;InbreedingCoeff=0.5823;MQ=67.40;MQ0=18;MQRankSum=-1.646;QD=5.32;ReadPosRankSum=5.163;VQSLOD=0.5749;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:14,9:23:20.97:164,21,0	1/1:6,0:6:6.78:40,7,0	0/0:20,0:9:13.74:0,14,117	0/0:27,0:17:22.13:0,22,194	1/1:8,12:19:29.79:218,30,0	0/1:16,0:16:6.79:12,0,7	1/1:8,11:17:24.98:158,25,0	0/0:30,0:30:7.06:0,7,245	1/1:16,0:16:2.79:20,3,0	1/1:9,6:11:14.94:121,15,0	1/1:10,0:9:2.84:20,3,0	0/0:17,0:17:24.01:0,24,240	0/0:4,0:4:8.96:0,9,68	0/1:11,1:12:8.03:8,0,122	1/1:3,23:24:65.57:484,66,0	0/0:14,0:14:22.37:0,22,202	0/1:12,0:13:6.17:6,0,65	1/1:12,3:14:5.96:44,6,0	0/0:17,0:15:23.95:0,24,234	0/0:14,0:14:18.02:0,18,175	0/0:15,0:13:11.87:0,12,112	0/1:15,1:15:13.57:14,0,79	0/0:11,0:11:9.01:0,9,90	0/0:21,1:23:15.97:0,16,334	1/1:6,2:8:5.94:43,6,0	0/0:8,0:7:9.01:0,9,97	0/0:14,0:14:20.97:0,21,178	0/0:1,1:1:1.25:0,1,3
chr10	42553471	.	CCCT	C	1957.87	PASS	AB=0.935;AC=15;AF=0.268;AN=56;BaseQRankSum=4.060;DP=456;FS=0.544;HRun=0;HaplotypeScore=93.8041;InbreedingCoeff=0.7487;MQ=58.20;MQ0=28;MQRankSum=-4.251;QD=14.29;ReadPosRankSum=5.026;VQSLOD=3.3327;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:27,2:26:38.26:197,0,38	1/1:4,0:4:2.44:21,2,0	0/0:19,0:7:10.20:0,10,124	0/0:23,0:12:21.03:0,21,253	1/1:22,1:22:30.06:412,30,0	0/0:24,0:24:22.57:0,23,213	0/0:20,0:18:24.85:0,25,140	0/0:27,0:26:46.09:0,46,430	0/0:21,0:21:14.62:0,15,111	1/1:19,1:15:29.61:254,30,0	1/1:4,5:7:3.22:46,3,0	0/0:13,0:13:23.86:0,24,358	0/0:7,0:7:20.89:0,21,224	0/0:12,0:12:16.66:0,17,210	1/1:28,1:27:75.03:975,75,0	0/0:13,0:13:25.37:0,25,281	0/0:12,0:12:0.41:0,0,85	1/1:6,9:13:14.84:142,15,0	0/0:20,0:16:38.87:0,39,385	0/0:14,0:14:19.62:0,20,226	0/0:15,0:13:12.98:0,13,191	0/0:16,0:15:15.36:0,15,157	0/0:9,0:9:14.93:0,15,128	0/0:25,0:25:37.97:0,38,451	1/1:4,4:7:6.01:89,6,0	0/0:9,0:6:14.98:0,15,207	0/0:13,0:12:20.99:0,21,232	0/0:7,0:6:16.18:0,16,124
chr10	42553472	.	C	CT	1547.06	PASS	AB=0.988;AC=29;AF=0.518;AN=56;BaseQRankSum=3.729;DP=472;FS=11.918;HRun=0;HaplotypeScore=108.3089;InbreedingCoeff=0.0484;MQ=58.00;MQ0=28;MQRankSum=-2.223;QD=4.37;ReadPosRankSum=3.492;VQSLOD=2.8131;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:28,4:29:3.85:116,0,4	1/1:3,0:4:7.20:59,7,0	0/0:19,0:7:9.57:0,10,111	0/0:23,0:12:20.90:0,21,211	1/1:24,0:23:5.24:55,5,0	1/1:3,21:25:24.08:329,24,0	1/1:15,2:15:30.45:387,30,0	0/1:27,0:26:23.33:23,0,202	1/1:3,20:23:14.45:200,14,0	0/1:20,1:16:36.01:59,0,36	0/0:9,0:7:0.88:0,1,2	0/0:13,0:13:23.37:0,23,212	0/1:8,0:8:8.96:50,0,9	0/1:14,0:14:15.26:15,0,110	1/1:28,1:27:3.96:114,4,0	0/0:13,0:13:0.57:0,1,140	0/1:13,0:13:51.10:102,0,51	0/1:15,0:13:0.50:1,0,25	0/1:20,0:16:43.95:44,0,180	0/0:14,0:14:14.72:0,15,156	0/1:13,0:11:7.90:8,0,41	0/1:19,0:18:9.10:9,0,92	0/1:9,0:9:6.77:7,0,78	0/0:27,0:27:37.32:0,37,375	1/1:8,0:7:4.43:14,4,0	0/1:12,0:9:25.18:25,0,31	0/1:14,0:13:3.51:4,0,105	1/1:7,0:6:13.10:95,13,0
chr10	42553484	.	TCTCACACACA	T	3624.43	PASS	AB=1.000;AC=14;AF=0.250;AN=56;BaseQRankSum=2.664;DP=487;FS=8.922;HRun=0;HaplotypeScore=141.0719;InbreedingCoeff=0.7196;MQ=54.20;MQ0=24;MQRankSum=-3.769;QD=25.00;ReadPosRankSum=3.733;VQSLOD=2.5612;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:33:6.70:0,7,1880	0/1:3,0:3:3.48:3,0,90	0/1:18,0:6:6.45:6,0,85	0/0:23,0:9:12.92:0,13,280	1/1:9,1:30:23.76:214,24,0	0/0:28,0:28:39.09:0,39,1565	0/0:16,0:15:35.95:0,36,752	0/0:23,0:22:62.94:0,63,2014	0/0:25,0:25:38.59:0,39,1442	1/1:8,16:20:35.50:684,35,0	1/1:14,0:11:6.93:221,7,0	0/0:17,0:17:14.51:0,15,623	0/0:14,0:14:36.12:0,36,1445	0/0:14,0:14:32.98:0,33,1216	1/1:7,25:32:68.41:1738,68,0	0/0:7,0:7:15.03:0,15,491	0/0:9,0:9:15.02:0,15,390	1/1:8,4:11:17.99:465,18,0	0/0:17,0:13:29.90:0,30,724	0/0:14,0:14:15.19:0,15,265	0/0:15,0:13:12.03:0,12,340	0/0:18,0:17:26.69:0,27,956	0/0:9,0:9:6.02:0,6,274	0/0:24,0:24:0.13:0,0,540	1/1:9,2:10:9.03:292,9,0	0/0:16,0:13:33.01:0,33,1039	0/0:10,0:9:12.04:0,12,498	0/0:7,0:6:15.05:0,15,679
chr10	42553486	.	T	TCA	2879.28	PASS	AB=0.742;AC=34;AF=0.630;AN=54;BaseQRankSum=-6.053;DP=508;FS=1.371;HRun=0;HaplotypeScore=113.7971;InbreedingCoeff=0.3967;MQ=55.42;MQ0=24;MQRankSum=5.376;QD=8.44;ReadPosRankSum=-1.906;VQSLOD=3.2346;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:37,0:36:47.93:442,48,0	1/1:3,0:3:3:26,3,0	./.	0/0:25,0:9:8.97:0,9,76	0/0:31,0:30:5.68:0,6,28	0/1:27,2:29:11.55:182,0,12	1/1:15,1:15:9.01:111,9,0	1/1:22,0:21:21.10:298,21,0	1/1:24,3:27:14.18:322,14,0	0/0:21,0:19:16.35:0,16,78	0/0:11,0:11:8.64:0,9,47	0/1:9,9:18:15.44:83,0,15	1/1:15,0:15:38.24:382,38,0	1/1:15,0:15:15.98:211,16,0	0/0:32,0:32:48.29:0,48,237	1/1:7,0:7:9:94,9,0	1/1:10,0:10:17.45:122,17,0	0/0:12,0:12:12.68:0,13,60	1/1:16,0:12:11.67:123,12,0	0/1:4,0:17:18.49:30,0,18	1/1:11,5:15:3.90:48,4,0	0/1:21,0:20:9.78:134,0,10	1/1:5,3:9:5.38:39,5,0	0/1:15,13:29:37.33:37,0,40	0/0:11,0:10:8.52:0,9,42	1/1:15,0:12:19.12:141,19,0	0/1:4,1:10:11.56:110,0,12	1/1:6,0:6:13.07:130,13,0
chr10	42553514	.	A	ACACACACACACATG	866.86	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=1.077;DP=502;FS=5.153;HRun=0;HaplotypeScore=203.2476;InbreedingCoeff=0.8473;MQ=69.02;MQ0=7;MQRankSum=-1.500;QD=50.99;ReadPosRankSum=0.104;VQSLOD=2.6088;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:35.98:0,36,1088	1/1:2,0:3:3.01:209,3,0	0/0:25,0:16:29.37:0,29,548	0/0:25,0:18:27:0,27,736	0/0:33,0:32:36.11:0,36,628	0/0:28,0:28:20.51:0,21,827	0/0:13,0:13:33.07:0,33,499	0/0:24,0:24:65.88:0,66,1344	0/0:23,0:23:51.53:0,52,1038	0/0:17,0:17:48.12:0,48,998	0/0:12,0:9:15.05:0,15,362	0/0:18,0:18:27.56:0,28,551	0/0:15,0:15:16.57:0,17,914	0/0:16,0:16:36.78:0,37,992	0/0:34,0:34:63.22:0,63,1875	0/0:6,0:6:18.06:0,18,293	1/1:1,9:14:12.04:761,12,0	0/0:13,0:11:30.10:0,30,572	0/0:9,0:9:14.61:0,15,267	0/0:22,0:22:30.13:0,30,503	0/0:12,0:12:21.07:0,21,353	0/0:19,0:19:39.56:0,40,870	0/0:12,0:12:30.09:0,30,515	0/0:23,0:23:21.07:0,21,519	0/0:12,0:11:24.08:0,24,530	0/0:18,0:17:45.06:0,45,803	0/0:18,0:18:39.11:0,39,626	0/0:8,0:8:24.03:0,24,527
chr10	42554141	.	TA	T	13934.14	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-3.558;DP=534;FS=1.820;HRun=6;HaplotypeScore=57.5367;InbreedingCoeff=0.9099;MQ=82.69;MQ0=1;MQRankSum=-7.715;QD=27.65;ReadPosRankSum=4.135;VQSLOD=5.3362;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,30:34:93.21:989,93,0	1/1:0,6:6:15.04:161,15,0	0/0:19,0:19:39.12:0,39,497	0/0:11,0:11:9.31:0,9,281	1/1:1,22:22:60.15:641,60,0	1/1:0,17:17:48.12:516,48,0	1/1:3,13:16:36.09:387,36,0	1/1:3,32:35:93.18:978,93,0	1/1:0,11:11:27.07:290,27,0	1/1:0,25:25:69.17:741,69,0	1/1:2,10:12:27.06:288,27,0	1/1:1,21:22:60.15:645,60,0	1/1:2,16:18:45.11:483,45,0	1/1:0,21:21:51.13:548,51,0	1/1:3,30:33:84.21:902,84,0	1/1:0,15:15:45.11:484,45,0	1/1:0,22:22:66.17:709,66,0	1/1:0,12:12:36.09:387,36,0	1/1:1,13:14:39.05:399,39,0	1/1:4,22:26:48.11:516,48,0	1/1:0,11:11:27.07:290,27,0	1/1:2,11:13:30.07:322,30,0	1/1:4,17:21:48.10:508,48,0	1/1:1,15:16:42.11:451,42,0	1/1:0,19:19:54.14:580,54,0	1/1:2,19:21:54.11:570,54,0	1/1:3,35:38:99:1096,102,0	1/1:0,2:2:5.97:52,6,0
chr10	42554972	.	T	TG	1305.85	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.737;DP=755;FS=4.555;HRun=0;HaplotypeScore=79.2591;InbreedingCoeff=0.9997;MQ=81.65;MQ0=0;MQRankSum=-3.445;QD=36.27;ReadPosRankSum=0.849;VQSLOD=3.3916;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,129,1800	1/1:0,11:11:30.10:469,30,0	0/0:24,0:23:66.19:0,66,884	0/0:22,0:21:50.62:0,51,665	0/0:28,0:28:78.26:0,78,1091	0/0:29,0:28:84.27:0,84,1158	0/0:22,0:22:66.21:0,66,907	0/0:35,0:35:99:0,105,1447	0/0:26,0:26:78.26:0,78,1091	0/0:33,0:33:96.32:0,96,1334	0/0:18,0:18:51.05:0,51,647	0/0:29,0:29:87.28:0,87,1202	0/0:30,0:30:87.28:0,87,1198	0/0:29,0:29:87.29:0,87,1217	0/0:41,0:41:99:0,117,1619	0/0:24,0:24:72.23:0,72,990	1/1:1,24:25:60.20:958,60,0	0/0:19,0:19:54.18:0,54,755	0/0:18,0:18:48.16:0,48,669	0/0:28,0:28:81.26:0,81,1116	0/0:41,0:41:99:0,117,1620	0/0:31,0:31:93.30:0,93,1283	0/0:18,0:18:54.18:0,54,755	0/0:29,0:29:87.29:0,87,1217	0/0:31,0:31:93.17:0,93,1215	0/0:22,0:22:63.17:0,63,853	0/0:35,0:34:99:0,105,1468	0/0:14,0:14:42.14:0,42,587
chr10	42555231	.	CGTTTTTTTTTT	C	1450.80	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=4.939;DP=640;FS=0.000;HRun=0;HaplotypeScore=220.2352;InbreedingCoeff=0.9493;MQ=68.99;MQ0=3;MQRankSum=-4.491;QD=60.45;ReadPosRankSum=4.726;VQSLOD=2.7417;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,114,3991	1/1:0,14:14:36.79:1253,37,0	0/0:37,0:17:48.08:0,48,1141	0/0:23,0:15:40.47:0,40,511	0/0:26,0:26:74.35:0,74,1496	0/0:29,0:29:84.20:0,84,3567	0/0:14,0:14:36.03:0,36,1435	0/0:32,0:32:87.27:0,87,2787	0/0:25,0:25:75.01:0,75,3126	0/0:31,0:32:90.11:0,90,1361	0/0:26,0:26:68.56:0,69,1278	0/0:28,0:28:75.22:0,75,3046	0/0:18,0:19:54.17:0,54,2442	0/0:17,0:17:45.11:0,45,1629	0/0:23,0:23:66.19:0,66,1058	0/0:21,0:21:57.15:0,57,1739	1/1:0,10:10:9.03:312,9,0	0/0:7,0:7:21.04:0,21,365	0/0:19,0:19:57:0,57,1496	0/0:26,0:26:78.20:0,78,2629	0/0:11,0:12:24.07:0,24,683	0/0:21,0:22:66.19:0,66,2603	0/0:32,0:33:99:0,99,3592	0/0:22,0:22:63.22:0,63,3007	0/0:22,0:21:63.16:0,63,1045	0/0:26,0:28:81.28:0,81,2911	0/0:26,0:25:69.22:0,69,2332	0/0:4,0:4:11.71:0,12,284
chr10	42555702	.	AG	A	1497.56	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=11.475;DP=679;FS=1.118;HRun=6;HaplotypeScore=74.0937;InbreedingCoeff=0.7831;MQ=76.00;MQ0=0;MQRankSum=-1.727;QD=22.02;ReadPosRankSum=0.751;VQSLOD=2.8146;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:81.21:0,81,1032	1/1:0,22:22:63.16:676,63,0	0/0:23,0:23:37.23:0,37,683	0/1:10,0:10:16.08:16,0,132	0/0:25,0:25:72.20:0,72,913	0/0:16,0:16:36.12:0,36,473	0/0:22,0:22:57.17:0,57,736	0/0:28,0:28:72.23:0,72,929	0/0:15,0:15:42.11:0,42,523	0/0:28,0:28:72.23:0,72,935	0/0:22,0:22:63.19:0,63,813	0/0:19,0:19:57.16:0,57,721	0/0:26,0:26:78.22:0,78,983	0/0:23,0:23:69.22:0,69,891	0/0:17,0:17:48.14:0,48,617	0/0:28,0:28:84.27:0,84,1105	1/1:4,32:36:87.22:935,87,0	0/0:14,0:14:33.04:0,33,398	0/0:26,0:26:66.20:0,66,855	0/0:28,0:28:84.27:0,84,1102	0/0:25,0:25:72.21:0,72,930	0/0:23,0:23:60.18:0,60,774	0/0:27,0:27:78.22:0,78,995	0/0:38,0:38:99:0,102,1327	0/0:34,0:34:93.25:0,93,1177	0/0:31,0:31:81.24:0,81,1037	0/0:33,0:33:96.31:0,96,1260	0/0:7,0:7:21.07:0,21,276
chr10	42556979	.	A	AT	828.48	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=-2.008;DP=596;FS=1.533;HRun=6;HaplotypeScore=62.4442;InbreedingCoeff=0.7823;MQ=87.84;MQ0=0;MQRankSum=0.321;QD=17.26;ReadPosRankSum=-0.135;VQSLOD=3.3348;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:81.16:0,81,817	1/1:0,8:8:24.08:301,24,0	0/1:21,0:21:13.81:14,0,307	0/0:25,0:25:49.04:0,49,462	0/0:24,0:24:54.12:0,54,551	0/0:21,0:21:63.13:0,63,636	0/0:18,0:18:48.11:0,48,490	0/0:25,0:25:66.14:0,66,668	0/0:24,0:24:60.11:0,60,605	0/0:17,0:17:45.10:0,45,458	0/0:14,0:14:39.07:0,39,391	0/0:26,0:26:72.14:0,72,723	0/0:23,0:23:63.13:0,63,636	0/0:21,0:21:63.14:0,63,643	0/0:25,0:25:63.12:0,63,630	0/0:27,0:27:75.17:0,75,764	1/1:0,18:18:51.16:642,51,0	0/0:15,0:15:42.09:0,42,427	0/0:25,0:25:69.15:0,69,704	0/0:29,0:29:81.17:0,81,820	0/0:8,0:8:21.04:0,21,211	0/0:27,0:27:66.11:0,66,657	0/0:19,0:17:39.08:0,39,398	0/0:23,0:23:63.14:0,63,643	0/0:21,0:21:60.11:0,60,599	0/0:22,0:22:60.13:0,60,612	0/0:35,0:35:99:0,105,1055	0/0:6,0:6:18.04:0,18,183
chr10	42557228	.	C	CTGTGTGTG	3640.24	PASS	AB=0.932;AC=40;AF=0.741;AN=54;BaseQRankSum=-1.777;DP=585;FS=0.918;HRun=0;HaplotypeScore=166.4823;InbreedingCoeff=0.5336;MQ=63.02;MQ0=7;MQRankSum=-1.577;QD=7.88;ReadPosRankSum=-1.690;VQSLOD=1.7925;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:38,0:37:5.92:113,6,0	1/1:5,0:5:3.01:71,3,0	./.	0/1:31,0:21:0:0,0,0	1/1:18,0:18:5.33:83,5,0	1/1:17,0:18:12.04:380,12,0	1/1:31,7:38:2.24:23,2,0	1/1:26,0:24:12.01:171,12,0	1/1:11,0:15:3.95:76,4,0	0/0:12,0:13:2.90:0,3,16	0/1:19,0:22:39.73:40,0,60	0/1:18,3:21:0.02:0,0,0	1/1:19,0:18:6.49:176,6,0	1/1:18,0:20:14.96:399,15,0	0/0:16,0:17:17.84:0,18,316	0/0:16,0:23:17.63:0,18,206	1/1:17,0:18:12.45:202,12,0	0/0:12,0:16:14.73:0,15,170	1/1:15,3:16:12.04:333,12,0	1/1:24,0:23:15.07:264,15,0	1/1:18,0:18:5.50:125,6,0	0/1:18,0:18:0:0,0,0	1/1:20,0:19:2.86:70,3,0	1/1:21,0:21:11.80:270,12,0	0/0:14,0:24:20.51:0,21,171	1/1:21,0:19:18.87:477,19,0	1/1:15,6:22:13.93:335,14,0	1/1:5,0:5:3.01:32,3,0
chr10	42557271	.	TAC	T	358.21	PASS	AB=0.990;AC=14;AF=0.250;AN=56;BaseQRankSum=2.490;DP=424;FS=17.742;HRun=0;HaplotypeScore=102.2621;InbreedingCoeff=-0.1545;MQ=44.44;MQ0=13;MQRankSum=-0.938;QD=2.08;ReadPosRankSum=-2.483;VQSLOD=0.1230;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:18,0:17:30.84:31,0,158	0/1:4,0:4:12.04:39,0,12	0/0:25,0:8:24.08:0,24,382	0/0:35,0:11:32.45:0,32,424	0/1:14,0:14:26.47:26,0,164	0/1:15,0:15:0.28:0,0,149	0/0:20,1:19:18.06:0,18,298	0/0:11,0:10:26.88:0,27,403	0/0:10,1:11:11.22:0,11,107	0/0:11,1:12:11.99:0,12,442	0/0:13,0:13:2.86:0,3,340	0/0:16,0:15:8.76:0,9,102	0/1:9,0:8:7.15:7,0,69	0/1:12,0:12:47.75:57,0,48	0/0:16,0:14:21.70:0,22,387	0/0:15,0:15:28.62:0,29,358	0/1:12,2:14:76.14:76,0,129	0/0:14,1:15:11.22:0,11,386	0/0:12,0:11:28.91:0,29,439	0/1:20,0:19:91.42:91,0,257	0/1:15,0:15:46.60:47,0,115	0/0:14,4:18:13.19:0,13,170	0/1:15,0:13:27.98:28,0,173	0/1:22,0:22:30.16:30,0,192	0/0:21,0:21:35.95:0,36,563	0/1:11,0:9:13:13,0,286	0/0:10,1:11:13.09:0,13,149	1/1:1,2:3:8.91:64,9,0
chr10	42557297	.	G	GGAGAGA	5850.16	PASS	AB=0.900;AC=44;AF=0.846;AN=52;BaseQRankSum=-1.710;DP=465;FS=1.271;HRun=0;HaplotypeScore=167.3392;InbreedingCoeff=0.4097;MQ=47.47;MQ0=14;MQRankSum=-2.384;QD=14.27;ReadPosRankSum=-0.623;VQSLOD=4.1580;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:18:21.44:380,21,0	0/1:8,0:8:13.97:14,0,37	./.	./.	0/0:16,0:16:10.16:0,10,82	1/1:20,0:20:12.96:249,13,0	1/1:25,0:25:29.83:411,30,0	1/1:22,0:19:15.23:102,15,0	1/1:13,0:12:9.03:212,9,0	1/1:22,0:22:34.08:547,34,0	0/1:5,9:15:0.54:1,0,1	1/1:18,0:19:25.09:331,25,0	1/1:15,0:16:36.52:734,37,0	1/1:14,0:14:8.65:128,9,0	1/1:8,3:11:14.88:445,15,0	1/1:12,0:14:19.89:275,20,0	0/1:13,0:12:15.72:25,0,16	1/1:13,0:15:22.76:360,23,0	1/1:18,0:17:13.95:113,14,0	1/1:17,0:16:8.48:69,8,0	0/1:13,0:13:0.01:0,0,0	1/1:20,0:20:17.31:244,17,0	1/1:12,0:12:9.13:52,9,0	1/1:19,0:18:5.60:18,6,0	1/1:22,0:22:22.79:325,23,0	1/1:20,0:18:19.30:454,19,0	1/1:22,0:22:25.38:362,25,0	0/0:5,0:1:0.47:0,0,1
chr10	42557332	.	AAG	A	102.13	PASS	AB=1.000;AC=4;AF=0.071;AN=56;BaseQRankSum=2.695;DP=596;FS=1.973;HRun=0;HaplotypeScore=150.1718;InbreedingCoeff=0.2903;MQ=57.89;MQ0=28;MQRankSum=4.450;QD=1.42;ReadPosRankSum=-0.919;VQSLOD=2.7512;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:24:48.12:0,48,619	0/0:13,0:13:7.56:0,8,95	0/1:38,0:16:9.91:10,0,373	0/0:51,0:21:10.31:0,10,409	1/1:7,10:17:20.83:191,21,0	0/0:25,0:25:8.10:0,8,515	0/0:30,0:30:60.17:0,60,839	0/0:41,0:39:52.51:0,53,1096	0/0:18,0:18:42.13:0,42,600	0/0:24,0:24:65.22:0,65,931	0/0:17,0:17:33.02:0,33,396	0/0:17,0:17:6.18:0,6,63	0/0:17,0:19:15.60:0,16,167	0/0:17,0:17:3.34:0,3,26	0/0:12,0:12:26.69:0,27,362	0/0:15,0:15:27.09:0,27,412	0/0:14,0:13:14.90:0,15,111	0/0:17,0:17:28.03:0,28,397	0/0:18,0:16:36.58:0,37,540	0/0:17,0:15:21.06:0,21,310	0/1:17,0:17:3.73:4,0,379	0/0:24,0:25:11.99:0,12,105	0/0:4,0:10:5.79:0,6,25	0/0:21,0:20:2.95:0,3,25	0/0:21,0:21:2.62:0,3,475	0/0:24,0:23:66.22:0,66,1004	0/0:23,0:23:44.43:0,44,552	0/0:9,0:7:18.02:0,18,233
chr10	42559502	.	CACACACATATGCACAT	C	2845.86	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=7.192;DP=963;FS=2.671;HRun=0;HaplotypeScore=460.1801;InbreedingCoeff=0.8407;MQ=56.04;MQ0=4;MQRankSum=-6.148;QD=14.90;ReadPosRankSum=-4.693;VQSLOD=0.0062;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:35:60.90:0,61,2363	0/0:12,0:12:30.10:0,30,1295	0/0:40,0:22:38.83:0,39,775	0/0:41,0:28:44.09:0,44,825	0/0:31,0:31:66.11:0,66,2546	0/0:32,0:32:11.70:0,12,156	0/0:29,0:29:42.08:0,42,862	0/0:31,0:30:48.15:0,48,1062	0/0:33,0:33:9.70:0,10,177	1/1:4,42:46:62.57:1066,63,0	1/1:5,17:22:14.84:100,15,0	0/0:38,0:38:18.55:0,19,311	0/0:41,0:41:8.91:0,9,408	0/1:42,0:41:4.50:4,0,492	1/1:39,0:39:86.27:766,86,0	0/0:50,0:50:25.44:0,25,555	0/0:51,0:50:99:0,123,5193	1/1:14,0:14:27.05:605,27,0	0/0:18,0:17:5.08:0,5,126	0/0:35,0:35:11.19:0,11,248	0/0:67,0:68:46.91:0,47,955	0/0:47,0:47:21.05:0,21,357	0/0:26,0:26:15.05:0,15,349	0/0:39,0:39:21.33:0,21,410	1/1:28,0:28:56.50:479,56,0	0/0:38,0:37:37.06:0,37,664	0/0:25,0:25:16.88:0,17,469	0/0:11,0:11:21.06:0,21,482
chr10	42559526	.	TATGCACATACACAA	T	19810.82	PASS	AB=0.874;AC=35;AF=0.648;AN=54;BaseQRankSum=-10.354;DP=932;FS=10.764;HRun=0;HaplotypeScore=384.5603;InbreedingCoeff=0.4342;MQ=53.01;MQ0=7;MQRankSum=2.937;QD=27.94;ReadPosRankSum=7.050;VQSLOD=1.9694;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:66.27:0,66,1745	0/0:13,0:13:33.11:0,33,912	0/0:44,0:26:38.58:0,39,738	0/0:39,0:27:52.54:0,53,829	0/0:26,0:26:55.19:0,55,1068	1/1:22,0:22:38.08:931,38,0	1/1:19,0:19:16.74:354,17,0	1/1:17,0:16:16.19:123,16,0	1/1:32,0:32:50.12:1345,50,0	0/1:47,0:47:99:222,0,279	0/1:21,0:21:18.90:19,0,42	1/1:38,0:37:66.36:1776,66,0	1/1:50,0:50:96.52:2401,97,0	1/1:40,0:38:69.57:1660,70,0	0/1:33,0:33:22.40:22,0,193	1/1:47,0:47:99:2493,108,0	0/0:48,0:48:99:0,126,3046	0/1:10,0:10:55.58:125,0,56	1/1:15,0:13:35.95:820,36,0	0/1:8,37:45:5.68:89,0,6	1/1:74,0:69:99:2860,130,0	0/1:12,38:50:35.03:111,0,35	1/1:7,22:27:7.51:57,8,0	1/1:41,0:41:26.48:1736,26,0	./.	1/1:10,30:39:60.37:1231,60,0	1/1:25,0:25:29.08:1116,29,0	0/1:14,0:14:45.87:319,0,46
chr10	42559534	.	T	TAC	16945.90	PASS	AB=1.000;AC=38;AF=0.679;AN=56;BaseQRankSum=1.521;DP=918;FS=2.059;HRun=0;HaplotypeScore=247.5206;InbreedingCoeff=0.5472;MQ=52.74;MQ0=7;MQRankSum=3.442;QD=23.54;ReadPosRankSum=4.405;VQSLOD=5.3894;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:72.69:0,73,983	0/0:14,0:14:39.12:0,39,519	0/0:43,0:22:47.82:0,48,609	0/0:39,0:25:54.14:0,54,698	0/0:25,0:25:48.16:0,48,659	1/1:27,0:27:44.98:763,45,0	1/1:18,0:18:33.08:475,33,0	1/1:10,0:9:4.85:48,5,0	1/1:29,7:37:72.25:1226,72,0	0/1:49,0:49:99:108,0,276	0/1:24,0:24:17.98:18,0,35	1/1:35,0:34:84.14:1374,84,0	1/1:51,0:51:99:2031,122,0	1/1:37,0:36:69.24:1158,69,0	0/1:29,0:29:10.35:10,0,106	1/1:52,0:52:99:1844,115,0	0/0:44,0:44:99:0,126,1658	0/1:11,0:11:65.24:122,0,65	1/1:15,0:13:36.12:616,36,0	1/1:43,0:43:12.03:206,12,0	1/1:72,0:67:99:2378,148,0	0/1:46,0:46:12.91:287,0,13	1/1:26,0:24:9.03:153,9,0	1/1:48,0:48:99:1723,105,0	0/1:18,0:18:0.01:0,0,0	1/1:37,0:36:65.60:1001,66,0	1/1:21,0:21:57.17:941,57,0	1/1:13,0:13:27.09:463,27,0
chr10	42559539	.	A	AC	8158.79	PASS	AB=0.865;AC=31;AF=0.554;AN=56;BaseQRankSum=10.029;DP=912;FS=3.696;HRun=1;HaplotypeScore=264.5569;InbreedingCoeff=0.4136;MQ=52.76;MQ0=4;MQRankSum=3.024;QD=12.61;ReadPosRankSum=10.002;VQSLOD=3.3045;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:69.13:0,69,993	0/0:14,0:14:42.13:0,42,570	0/0:42,0:20:51.14:0,51,656	0/0:41,0:24:66.10:0,66,825	0/0:25,0:25:60.05:0,60,759	1/1:6,21:27:0.38:363,0,0	0/1:20,5:25:86.88:189,0,87	0/1:7,0:6:18.49:40,0,18	0/1:17,24:41:51.37:570,0,51	0/1:49,0:49:22.16:22,0,354	0/0:24,0:24:15.80:0,16,129	1/1:8,29:36:55.27:709,55,0	1/1:7,46:54:54.33:970,54,0	1/1:7,28:33:28.79:572,29,0	0/0:8,21:29:17.34:0,17,173	1/1:14,35:49:50.30:935,50,0	0/0:45,0:45:99:0,129,1726	0/1:9,2:11:18.68:19,0,113	1/1:3,12:14:18.10:326,18,0	1/1:37,5:42:7.63:106,8,0	1/1:18,52:66:45.54:1143,46,0	0/1:39,7:46:18.78:147,0,19	1/1:22,3:23:8.03:82,8,0	1/1:15,32:47:15.41:790,15,0	0/0:2,13:15:2.96:0,3,19	0/1:30,5:34:40.55:433,0,41	1/1:2,18:20:56.94:493,57,0	1/1:1,10:11:27.02:250,27,0
chr10	42559540	.	A	AT	8371.69	PASS	AB=0.866;AC=32;AF=0.571;AN=56;BaseQRankSum=9.525;DP=918;FS=4.163;HRun=0;HaplotypeScore=265.5557;InbreedingCoeff=0.7294;MQ=52.67;MQ0=6;MQRankSum=3.684;QD=14.09;ReadPosRankSum=9.689;VQSLOD=4.4009;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:30:69.43:0,69,1009	0/0:14,0:14:42.13:0,42,572	0/0:41,0:20:51.16:0,51,677	0/0:41,0:24:66.08:0,66,806	0/0:27,0:27:63.74:0,64,749	1/1:7,21:28:19.14:382,19,0	1/1:21,5:26:0.10:322,0,0	0/0:8,0:6:17.71:0,18,127	1/1:15,24:39:26.29:602,26,0	0/0:49,0:49:4.59:0,5,404	0/0:24,0:24:15.51:0,16,111	1/1:8,29:36:66.97:760,67,0	1/1:9,46:55:81.91:1036,82,0	1/1:7,27:33:47.17:594,47,0	0/0:8,21:29:17.34:0,17,172	1/1:14,35:49:15.35:850,15,0	0/0:44,0:44:99:0,123,1683	0/1:10,2:12:15.67:16,0,146	1/1:3,12:14:30.20:361,30,0	1/1:37,5:42:7.56:106,8,0	1/1:18,53:66:54.70:1139,55,0	1/1:39,7:46:4.10:151,4,0	1/1:22,3:23:8.03:82,8,0	1/1:16,32:48:62.22:838,62,0	0/0:2,13:15:2.74:0,3,12	0/1:30,5:34:21.51:434,0,22	1/1:2,18:20:35.58:449,36,0	1/1:1,10:11:27.02:250,27,0
chr10	42559629	.	T	TACACACAC	2036.35	PASS	AB=0.968;AC=29;AF=0.558;AN=52;BaseQRankSum=-3.851;DP=855;FS=12.754;HRun=0;HaplotypeScore=254.7818;InbreedingCoeff=-0.0622;MQ=52.06;MQ0=21;MQRankSum=-1.352;QD=3.52;ReadPosRankSum=-7.506;VQSLOD=-0.3600;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:31:73.94:74,0,170	0/1:13,0:13:37.86:108,0,38	./.	./.	0/1:25,0:28:61.49:61,0,81	0/0:27,0:27:24.13:0,24,481	0/1:18,0:18:2.38:2,0,76	1/1:29,0:27:5.12:21,5,0	0/1:37,0:38:63.58:64,0,328	1/1:32,0:31:39.96:594,40,0	1/1:20,0:20:12.48:181,12,0	0/1:34,0:35:45.55:46,0,92	0/0:24,0:35:9.59:0,10,106	0/1:20,0:30:28.12:41,0,28	1/1:22,13:34:5.94:220,6,0	0/0:17,0:34:17.88:0,18,384	0/1:20,0:21:36.02:36,0,246	1/1:15,1:15:6:146,6,0	0/1:16,0:17:50.01:50,0,148	0/0:22,0:29:22.68:0,23,482	0/1:80,0:83:99:215,0,345	0/1:28,0:30:7.56:8,0,103	1/1:15,0:16:8.98:73,9,0	0/0:33,0:51:29.21:0,29,424	1/1:20,0:19:13.89:174,14,0	0/1:30,0:32:48.09:48,0,145	0/1:15,0:17:38.66:39,0,53	1/1:9,0:9:1.55:4,2,0
chr10	42561652	.	TAC	T	1337.73	PASS	AB=0.827;AC=29;AF=0.604;AN=48;BaseQRankSum=2.528;DP=512;FS=8.202;HRun=0;HaplotypeScore=70.2112;InbreedingCoeff=0.0913;MQ=63.18;MQ0=12;MQRankSum=1.705;QD=3.73;ReadPosRankSum=1.559;VQSLOD=1.1154;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:7.99:0,8,74	0/1:8,1:9:23.61:24,0,53	./.	./.	0/0:8,0:13:13.08:0,13,107	0/1:19,1:21:11.59:12,0,201	0/0:20,0:20:23.86:0,24,329	./.	0/0:13,0:14:9:0,9,95	1/1:13,4:16:10.99:121,11,0	1/1:4,4:8:3.01:33,3,0	1/1:9,7:16:9.02:98,9,0	1/1:16,4:20:6.02:65,6,0	0/1:13,8:22:35.66:56,0,36	1/1:14,5:19:9.02:98,9,0	0/1:11,1:22:14.61:15,0,130	0/0:9,0:9:6:0,6,51	0/1:6,7:13:19.05:145,0,19	0/1:13,0:12:30.97:31,0,33	1/1:13,7:21:14.87:144,15,0	1/1:28,4:40:20.70:183,21,0	1/1:11,6:18:3:25,3,0	1/1:10,0:10:2.74:12,3,0	0/1:19,5:27:3.39:119,0,3	1/1:14,5:19:11.01:90,11,0	0/1:17,5:22:9.93:95,0,10	0/1:14,5:21:21.20:132,0,21	./.
chr10	42561695	.	A	ACACA	112.72	PASS	AB=0.949;AC=10;AF=0.192;AN=52;BaseQRankSum=-1.333;DP=609;FS=0.000;HRun=0;HaplotypeScore=122.0880;InbreedingCoeff=0.2734;MQ=71.31;MQ0=15;MQRankSum=0.601;QD=0.72;ReadPosRankSum=-0.601;VQSLOD=2.1718;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:23,5:31:0:0,0,0	0/0:12,0:12:9.02:0,9,121	1/1:31,0:20:0.47:1,0,0	0/0:32,0:27:2.92:0,3,8	1/1:17,0:17:6.02:114,6,0	0/1:17,0:17:8.34:8,0,170	0/0:27,0:27:20.79:0,21,303	./.	0/1:17,0:16:6.59:7,0,40	0/0:19,0:18:9.48:0,9,85	0/0:10,0:10:3:0,3,28	0/0:22,0:22:9.01:0,9,84	0/0:23,0:23:5.88:0,6,56	0/0:19,0:19:8.96:0,9,102	0/0:18,0:18:8.99:0,9,84	0/1:24,0:24:22.96:23,0,60	1/1:20,0:20:3.71:73,4,0	0/0:18,0:18:14.99:0,15,140	0/0:20,0:19:3.47:0,3,29	0/0:23,0:23:14.80:0,15,139	0/0:60,0:58:18.28:0,18,168	0/0:17,0:16:1.41:0,1,2	0/0:16,0:16:3.01:0,3,38	0/0:26,0:26:21.01:0,21,191	0/0:15,0:15:6.48:0,6,57	0/0:28,0:28:9.36:0,9,78	0/0:22,0:21:24.50:0,25,242	./.
chr10	42562127	.	AT	A	5238.69	PASS	AB=0.806;AC=32;AF=0.571;AN=56;BaseQRankSum=1.381;DP=473;FS=3.722;HRun=10;HaplotypeScore=57.9006;InbreedingCoeff=0.8437;MQ=82.32;MQ0=0;MQRankSum=-1.722;QD=20.54;ReadPosRankSum=1.778;VQSLOD=5.9874;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,21:22:62.99:547,63,0	1/1:0,7:7:21:182,21,0	0/1:13,0:11:1.43:1,0,121	0/0:18,0:18:28.87:0,29,289	0/0:29,0:29:81.20:0,81,880	0/0:21,1:23:33.95:0,34,571	0/0:18,0:18:45.12:0,45,498	1/1:2,23:25:68.96:594,69,0	0/0:12,0:12:3.25:0,3,232	0/0:22,1:23:34.07:0,34,592	0/0:17,0:17:51.13:0,51,558	1/1:2,8:10:20.99:182,21,0	1/1:4,13:17:35.97:312,36,0	1/1:2,8:10:23.98:208,24,0	0/0:18,0:18:48.11:0,48,516	1/1:3,9:12:26.98:234,27,0	0/0:27,0:27:72.15:0,72,776	0/0:15,0:15:11.50:0,11,339	0/1:4,6:11:10.15:139,0,10	1/1:3,22:25:65.98:573,66,0	1/1:1,11:12:32.99:287,33,0	1/1:0,13:13:38.99:339,39,0	1/1:1,15:17:47.03:397,47,0	1/1:1,14:15:5.81:279,6,0	0/0:17,1:18:25.08:0,25,505	1/1:8,17:25:50.98:443,51,0	1/1:1,15:16:44.99:391,45,0	1/1:0,5:5:15:130,15,0
chr10	42562145	.	A	AT	1925.45	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-9.875;DP=473;FS=0.000;HRun=8;HaplotypeScore=66.3722;InbreedingCoeff=0.9911;MQ=73.14;MQ0=0;MQRankSum=-4.424;QD=29.17;ReadPosRankSum=1.040;VQSLOD=3.8434;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:66:0,66,597	0/0:7,0:7:18.01:0,18,165	0/0:12,0:10:23.93:0,24,202	0/0:10,0:10:20.97:0,21,181	0/0:30,0:30:75.03:0,75,683	1/1:3,14:18:48.11:540,48,0	1/1:1,15:16:45.13:519,45,0	0/0:33,0:33:74.97:0,75,668	1/1:1,6:7:21.05:232,21,0	0/0:20,0:20:42:0,42,384	0/0:18,0:18:36:0,36,329	0/0:10,0:10:24.01:0,24,220	0/0:16,0:16:32.97:0,33,291	0/0:10,0:10:21:0,21,192	0/0:14,0:14:42.02:0,42,384	0/0:10,0:10:24.01:0,24,219	1/1:1,24:25:69.20:795,69,0	0/0:12,0:12:33.01:0,33,302	0/0:11,0:11:24:0,24,220	0/0:29,0:30:66.22:0,66,719	0/0:11,0:11:33.02:0,33,302	0/0:16,0:16:42.02:0,42,384	0/0:19,0:19:53.98:0,54,486	0/0:16,0:16:33.01:0,33,302	0/0:22,0:22:65.98:0,66,592	0/0:24,0:24:66.01:0,66,596	0/0:21,0:21:57.01:0,57,515	0/0:8,0:8:23.98:0,24,212
chr10	42562319	.	GGT	G	245.24	PASS	AB=0.923;AC=13;AF=0.310;AN=42;BaseQRankSum=0.426;DP=562;FS=4.550;HRun=0;HaplotypeScore=94.0958;InbreedingCoeff=0.5096;MQ=69.83;MQ0=8;MQRankSum=0.477;QD=1.74;ReadPosRankSum=-1.179;VQSLOD=1.2476;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:31:5.80:0,6,40	0/0:6,0:5:9.02:0,9,113	./.	./.	0/0:26,0:26:11.80:0,12,135	0/0:31,0:30:4.67:0,5,51	0/0:30,0:30:6.46:0,6,52	./.	0/0:16,0:16:5.96:0,6,44	0/0:17,0:17:0.89:0,1,2	./.	0/0:20,0:23:11.97:0,12,100	0/0:21,0:22:18.01:0,18,162	0/0:9,0:12:6.01:0,6,66	1/1:19,6:24:12.03:128,12,0	0/1:11,1:12:19.96:20,0,100	1/1:21,0:26:5.68:28,6,0	1/1:16,2:19:8.86:78,9,0	1/1:22,0:22:2.84:14,3,0	./.	0/0:22,0:23:2.22:0,2,8	0/0:11,0:13:3:0,3,26	0/0:15,0:18:5.01:0,5,51	0/0:17,0:23:6.01:0,6,70	1/1:20,1:22:3.48:33,3,0	./.	1/1:7,0:13:17.52:84,18,0	./.
chr10	42563360	.	CGTGTGTGTGT	C	4759.84	PASS	AB=0.768;AC=27;AF=0.500;AN=54;BaseQRankSum=2.366;DP=551;FS=13.580;HRun=0;HaplotypeScore=197.7787;InbreedingCoeff=0.3520;MQ=61.00;MQ0=9;MQRankSum=-6.187;QD=15.26;ReadPosRankSum=-1.069;VQSLOD=2.9616;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:32:17.63:0,18,185	1/1:3,0:10:17.99:367,18,0	./.	0/0:22,0:15:3.01:0,3,41	0/0:21,0:25:26.66:0,27,410	1/1:14,5:19:6.02:178,6,0	1/1:8,6:15:9.50:269,10,0	0/0:23,0:22:9.03:0,9,171	1/1:7,7:15:20.65:585,21,0	1/1:16,6:22:21.02:543,21,0	1/1:10,7:18:18.06:516,18,0	0/0:12,0:20:27.09:0,27,440	0/1:10,2:20:18.37:212,0,18	0/1:13,0:16:44.73:45,0,66	1/1:16,9:29:26.68:620,27,0	1/1:7,2:19:30.06:357,30,0	1/1:13,2:14:9.01:177,9,0	0/1:15,2:17:20.87:169,0,21	0/0:20,0:22:8.61:0,9,97	0/0:28,0:34:1.21:0,1,68	0/0:25,0:25:15.05:0,15,259	0/1:9,0:17:10.59:11,0,110	0/0:14,0:15:16.91:0,17,110	0/1:13,0:17:15.23:15,0,102	1/1:11,5:18:22.89:587,23,0	0/1:20,0:25:63.09:63,0,138	0/1:9,0:17:27.46:45,0,27	0/0:5,0:7:2.60:0,3,10
chr10	42564823	.	GACAC	G	273.01	PASS	AB=0.941;AC=4;AF=0.071;AN=56;BaseQRankSum=2.714;DP=857;FS=0.000;HRun=0;HaplotypeScore=238.3401;InbreedingCoeff=0.3116;MQ=56.90;MQ0=14;MQRankSum=-2.604;QD=5.25;ReadPosRankSum=-3.750;VQSLOD=1.8081;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:63,0:63:99:0,165,2926	0/0:19,0:19:51.17:0,51,1218	0/0:34,0:12:26.81:0,27,403	0/0:66,0:19:22.58:0,23,406	1/1:12,0:12:2.98:21,3,0	0/0:28,0:28:53.77:0,54,881	0/0:26,0:26:29.72:0,30,419	0/0:38,0:33:91.93:0,92,1213	0/0:33,0:33:54.04:0,54,931	0/1:26,4:30:99:337,0,828	0/0:15,3:18:24.01:0,24,412	0/0:35,0:35:91.71:0,92,1546	0/0:34,0:34:95.25:0,95,1523	0/0:28,0:28:80.98:0,81,1369	0/0:35,12:47:37.46:0,37,1021	0/0:42,0:42:81.26:0,81,1442	0/0:38,0:38:99:0,110,1994	0/1:10,0:10:15.70:16,0,221	0/0:24,0:24:53.48:0,53,834	0/0:28,0:28:46.40:0,46,821	0/0:24,0:24:54.40:0,54,843	0/0:29,0:29:71.67:0,72,1233	0/0:28,0:28:68.77:0,69,1293	0/0:46,0:45:99:0,124,2376	0/0:14,4:18:26.28:0,26,271	0/0:25,0:25:74.61:0,75,1265	0/0:30,0:30:72.06:0,72,1208	0/0:4,0:4:12.04:0,12,224
chr10	42564827	.	C	CAGAGAG	2006.11	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=-1.985;DP=868;FS=28.758;HRun=0;HaplotypeScore=276.5276;InbreedingCoeff=0.3848;MQ=55.86;MQ0=14;MQRankSum=-5.918;QD=5.24;ReadPosRankSum=-3.238;VQSLOD=0.8733;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:59,0:59:1.74:0,2,1216	0/0:19,0:19:42.10:0,42,828	0/0:38,0:13:3:0,3,27	0/1:64,0:17:0.04:0,0,0	1/1:14,0:14:6.04:30,6,0	0/0:28,0:28:30.09:0,30,361	0/1:25,0:25:2.14:6,0,2	0/1:39,0:34:28.41:62,0,28	0/0:33,0:33:23.39:0,23,434	1/1:34,1:35:64.91:907,65,0	1/1:17,2:19:9.02:130,9,0	0/0:34,0:34:30.79:0,31,695	0/0:32,0:32:1.53:0,2,491	0/0:28,0:28:13.42:0,13,479	1/1:40,5:46:33.08:362,33,0	0/0:43,0:43:16.43:0,16,409	0/0:36,0:36:41.09:0,41,779	1/1:11,0:11:17.38:168,17,0	0/1:24,0:24:47.09:47,0,147	0/0:31,0:31:2.98:0,3,194	0/0:27,0:27:23.81:0,24,312	0/1:30,0:30:37.26:37,0,531	0/1:28,0:28:46.83:47,0,593	0/0:43,0:42:48.26:0,48,1171	1/1:15,3:18:19.13:273,19,0	0/1:28,0:28:99:115,0,252	0/0:30,0:30:7.81:0,8,359	0/0:4,0:4:9.03:0,9,108
chr10	42564845	.	GAGAC	G	5207.32	PASS	AB=0.987;AC=39;AF=0.696;AN=56;BaseQRankSum=1.057;DP=875;FS=43.689;HRun=0;HaplotypeScore=233.2241;InbreedingCoeff=-0.0135;MQ=52.36;MQ0=16;MQRankSum=-0.563;QD=7.03;ReadPosRankSum=-6.706;VQSLOD=0.5142;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:59,0:59:99:239,0,831	0/0:19,0:19:54.12:0,54,1200	0/0:44,0:12:24.01:0,24,256	0/0:71,0:11:0.38:0,0,73	1/1:19,0:19:3.01:46,3,0	1/1:25,0:25:30.13:200,30,0	1/1:25,0:25:4.33:55,4,0	1/1:38,0:33:34.16:378,34,0	1/1:37,0:37:44.48:318,44,0	0/1:32,3:35:70.91:504,0,71	1/1:18,0:18:17.30:172,17,0	0/1:37,0:37:99:138,0,494	0/1:27,0:27:99:129,0,351	0/1:25,0:25:99:119,0,298	0/1:41,1:42:33.21:406,0,33	1/1:37,0:37:44.18:198,44,0	0/1:26,0:26:22.72:23,0,549	1/1:11,0:11:23.20:181,23,0	1/1:30,0:29:51.64:469,52,0	1/1:33,0:33:37.92:199,38,0	1/1:31,0:31:38.85:179,39,0	0/1:30,0:30:99:166,0,376	0/1:28,0:28:81.89:82,0,426	0/1:46,0:45:99:114,0,778	0/1:20,1:21:5.79:260,0,6	1/1:29,0:29:66.55:396,67,0	1/1:28,0:28:45.49:202,45,0	1/1:4,0:4:8.10:34,8,0
chr10	42564847	.	GAC	G	9546.68	PASS	AB=0.982;AC=42;AF=0.750;AN=56;BaseQRankSum=-7.854;DP=861;FS=35.564;HRun=0;HaplotypeScore=193.0079;InbreedingCoeff=0.1785;MQ=52.66;MQ0=15;MQRankSum=-0.136;QD=13.06;ReadPosRankSum=-7.630;VQSLOD=2.0610;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:58,1:59:99:409,0,139	0/0:19,0:19:54.12:0,54,894	0/0:42,0:12:24.22:0,24,263	0/0:69,0:13:7.80:0,8,110	1/1:3,17:20:2.69:45,3,0	1/1:1,24:25:30.07:456,30,0	1/1:0,25:25:5.37:88,5,0	1/1:8,30:33:42.62:861,43,0	1/1:2,35:37:45.10:684,45,0	1/1:33,1:34:33.22:421,33,0	1/1:15,2:17:20.26:154,20,0	0/1:33,0:33:66.25:198,0,66	0/1:26,0:26:69.47:216,0,69	0/1:23,1:24:22.39:207,0,22	1/1:40,1:41:29.31:351,29,0	1/1:1,34:35:48.16:730,48,0	0/1:25,0:25:39.53:40,0,93	1/1:11,0:11:22.16:155,22,0	1/1:3,25:27:39.75:674,40,0	1/1:1,32:33:40.41:550,40,0	1/1:3,28:31:46.37:663,46,0	0/1:30,0:30:45.43:209,0,45	0/1:28,2:30:62.31:194,0,62	0/1:45,1:45:99:184,0,138	1/1:22,0:22:21.80:204,22,0	1/1:3,26:29:75.31:944,75,0	1/1:1,28:29:51:772,51,0	1/1:0,3:3:9.03:137,9,0
chr10	42564849	.	C	CAGAG	7571.95	PASS	AB=1.000;AC=46;AF=0.821;AN=56;BaseQRankSum=0.721;DP=855;FS=3.570;HRun=0;HaplotypeScore=225.1924;InbreedingCoeff=0.4077;MQ=52.70;MQ0=13;MQRankSum=-2.124;QD=10.46;ReadPosRankSum=-4.119;VQSLOD=3.1809;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:56,0:57:12.63:478,0,13	0/0:19,0:19:54.16:0,54,859	0/0:44,0:12:19:0,19,365	0/0:67,0:15:13.84:0,14,196	1/1:20,0:20:3.46:25,3,0	1/1:24,0:24:16.45:45,16,0	1/1:26,0:26:1:25,1,0	1/1:38,0:34:54.03:593,54,0	1/1:36,0:36:29.11:94,29,0	1/1:33,1:34:84.08:1118,84,0	1/1:15,2:17:15.93:152,16,0	1/1:33,0:33:23.99:537,24,0	0/1:25,0:25:7.37:307,0,7	0/1:24,0:24:6.22:322,0,6	1/1:35,6:41:53.97:594,54,0	1/1:34,0:34:30.57:84,31,0	1/1:26,0:26:0.06:165,0,0	1/1:11,0:11:27.20:298,27,0	1/1:29,0:28:37.95:584,38,0	1/1:32,0:32:32.52:197,33,0	1/1:30,0:30:31.06:162,31,0	1/1:29,0:29:10.05:319,10,0	0/1:30,0:30:2.31:134,0,2	1/1:44,0:43:0.87:317,1,0	1/1:21,3:24:27.87:311,28,0	1/1:28,0:28:52.40:588,52,0	1/1:28,0:28:27.57:110,28,0	1/1:4,0:4:4.80:12,5,0
chr10	42565296	.	GTATATATATATATATATATATATATATA	G	715.67	PASS	AC=8;AF=0.80;AN=10;BaseQRankSum=-0.386;DP=115;FS=0.000;HRun=0;HaplotypeScore=86.2452;MQ=95.75;MQ0=0;MQRankSum=0.849;QD=23.09;ReadPosRankSum=1.466;VQSLOD=1.2689;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	./.	1/1:9,0:8:3:29,3,0	./.	./.	./.	./.	./.	./.	1/1:4,3:8:12.03:667,12,0	1/1:6,0:6:9:97,9,0	./.	./.	./.	./.	./.	0/0:9,0:9:10.85:0,11,720	1/1:6,0:8:0.47:1,0,0	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.
chr10	42570737	.	GTT	G	5213.54	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-0.673;DP=707;FS=1.885;HRun=11;HaplotypeScore=120.1946;InbreedingCoeff=0.9634;MQ=65.45;MQ0=1;MQRankSum=-0.584;QD=25.43;ReadPosRankSum=2.802;VQSLOD=4.4861;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,38:40:93.21:990,93,0	0/0:9,0:9:24.06:0,24,265	0/0:16,0:16:27.06:0,27,371	0/0:10,0:11:2.10:0,2,21	1/1:3,30:34:89.94:936,90,0	0/0:1,0:14:29.94:0,30,103	0/0:4,0:33:62.90:0,63,252	0/0:39,0:38:96.22:0,96,1039	0/0:1,1:25:24.01:0,24,165	1/1:4,32:36:93.02:968,93,0	1/1:2,28:30:66.09:758,66,0	0/0:0,0:26:44.96:0,45,430	0/0:6,0:29:54.04:0,54,539	0/0:2,0:26:60.05:0,60,584	1/1:1,19:20:57.13:607,57,0	0/0:2,0:17:33.05:0,33,316	0/0:28,0:30:68.88:0,69,1118	1/1:5,17:22:41.33:445,41,0	0/0:22,0:22:34.48:0,34,526	0/0:33,0:33:90.25:0,90,1011	0/0:21,0:21:54.15:0,54,629	0/0:12,0:18:48.03:0,48,461	0/0:11,0:26:72.06:0,72,680	0/0:4,0:19:39.05:0,39,385	1/1:5,17:22:48.09:511,48,0	0/0:35,0:37:82.64:0,83,954	0/0:31,0:32:82.66:0,83,965	0/0:19,0:19:45.13:0,45,518
chr10	42572452	.	AC	A	307.21	PASS	AB=0.974;AC=5;AF=0.089;AN=56;BaseQRankSum=-1.465;DP=554;FS=5.138;HRun=9;HaplotypeScore=94.8042;InbreedingCoeff=0.3505;MQ=72.50;MQ0=7;MQRankSum=-1.090;QD=3.99;ReadPosRankSum=-2.278;VQSLOD=0.2675;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,11:11:33.02:302,33,0	0/0:10,0:9:12:0,12,33	0/0:25,0:22:49.54:0,50,472	0/1:22,2:22:8.76:9,0,358	0/0:25,0:25:58.76:0,59,395	0/0:21,0:21:59.85:0,60,375	0/0:11,0:12:21.28:0,21,154	0/1:25,0:21:29.08:65,0,29	0/0:17,0:18:39.34:0,39,242	0/0:16,0:16:39.11:0,39,442	0/0:21,0:21:57.14:0,57,635	0/0:31,0:31:67.35:0,67,423	0/0:26,0:26:54.88:0,55,362	0/0:18,0:19:37.04:0,37,261	0/0:26,0:26:66.17:0,66,743	0/0:26,0:25:57.48:0,57,358	0/0:9,0:9:25.20:0,25,157	0/0:10,0:10:24.03:0,24,254	0/1:17,0:17:11.29:52,0,11	0/0:29,0:28:38.70:0,39,109	0/0:13,1:13:14.26:0,14,40	0/0:11,0:11:25.40:0,25,150	0/0:23,0:23:62.76:0,63,397	0/0:30,0:30:82.16:0,82,521	0/0:21,0:21:54.14:0,54,606	0/0:21,0:20:20.72:0,21,122	0/0:26,0:26:19.36:0,19,83	0/0:6,0:7:8.15:0,8,23
chr10	42572460	.	C	CACA	6504.29	PASS	AB=0.848;AC=17;AF=0.304;AN=56;BaseQRankSum=-13.337;DP=561;FS=22.270;HRun=0;HaplotypeScore=101.2216;InbreedingCoeff=0.6753;MQ=68.91;MQ0=7;MQRankSum=-1.326;QD=36.13;ReadPosRankSum=-1.061;VQSLOD=3.5453;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:15,0:15:13.79:14,0,230	1/1:0,6:9:18.06:405,18,0	0/0:29,0:25:75.10:0,75,993	0/0:24,0:22:3.24:0,3,600	0/0:23,0:23:60.71:0,61,490	0/0:25,0:25:37.73:0,38,425	0/0:12,0:12:29.86:0,30,228	1/1:1,22:24:63.61:1126,64,0	0/0:16,0:16:39.69:0,40,298	0/0:18,0:18:51.16:0,51,856	0/0:24,0:24:69.19:0,69,1102	0/0:25,0:25:64.26:0,64,472	0/0:21,0:21:34.04:0,34,427	0/0:19,0:19:23.08:0,23,334	0/0:26,0:26:75.24:0,75,1276	0/0:23,0:22:57.93:0,58,429	0/1:12,0:12:15.11:15,0,144	0/0:8,0:8:24.07:0,24,415	1/1:0,14:16:40.06:679,40,0	1/1:1,26:29:63.11:1380,63,0	1/1:1,12:13:21.07:482,21,0	0/0:12,0:12:5.18:0,5,161	0/0:23,0:23:62.91:0,63,470	0/0:34,0:34:2.74:0,3,537	0/0:19,0:19:54.17:0,54,945	0/1:4,17:23:29.53:1052,0,30	1/1:0,23:24:51.17:1140,51,0	1/1:2,4:7:11.06:212,11,0
chr10	42573673	.	TACACACACAC	T	5682.77	PASS	AB=0.742;AC=33;AF=0.589;AN=56;BaseQRankSum=7.949;DP=772;FS=1.056;HRun=0;HaplotypeScore=240.9296;InbreedingCoeff=0.4486;MQ=57.18;MQ0=14;MQRankSum=-4.904;QD=10.56;ReadPosRankSum=3.218;VQSLOD=3.5791;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:41:2.43:151,0,2	1/1:7,3:9:5.75:102,6,0	0/0:51,0:22:11.90:0,12,162	0/0:52,0:28:12.04:0,12,236	1/1:17,9:27:18.39:282,18,0	1/1:9,0:25:12.10:475,12,0	1/1:15,0:30:9.66:150,10,0	0/1:32,4:36:47.89:231,0,48	1/1:9,0:24:4.45:113,4,0	0/0:20,0:32:57.20:0,57,1552	0/0:16,0:16:23.28:0,23,732	1/1:11,0:21:5.11:227,5,0	0/1:8,0:26:7.03:235,0,7	1/1:13,0:38:37.16:574,37,0	0/0:23,0:32:62.34:0,62,1542	1/1:14,14:30:16.57:399,17,0	0/1:16,0:32:2.60:3,0,131	0/0:14,0:18:30.02:0,30,730	1/1:11,5:16:10.44:323,10,0	1/1:20,13:34:29.78:452,30,0	1/1:19,26:43:2.64:19,3,0	1/1:14,0:24:11.04:188,11,0	0/1:7,1:16:30.93:115,0,31	0/0:15,0:14:2.98:0,3,22	0/0:16,0:16:24.01:0,24,534	0/1:13,12:26:31.22:710,0,31	1/1:11,12:25:20.60:849,21,0	0/1:9,0:9:0.15:86,0,0
chr10	42574046	.	AACAC	A	1759.43	PASS	AC=12;AF=0.222;AN=54;BaseQRankSum=-0.510;DP=528;FS=2.086;HRun=0;HaplotypeScore=100.7418;InbreedingCoeff=0.7279;MQ=60.89;MQ0=8;MQRankSum=1.672;QD=15.57;ReadPosRankSum=2.151;VQSLOD=3.4929;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:18.33:0,18,230	0/0:2,0:4:3.01:0,3,52	./.	0/0:27,0:19:3.01:0,3,43	0/0:9,0:21:23.44:0,23,387	0/0:5,0:17:23.82:0,24,360	0/0:13,0:21:19.96:0,20,391	0/0:37,0:38:45.11:0,45,727	0/0:15,0:19:29.48:0,29,433	1/1:14,10:26:23.30:350,23,0	1/1:6,12:19:12.05:293,12,0	0/0:9,0:9:5.09:0,5,116	0/0:8,0:21:15.03:0,15,212	0/0:6,0:6:12.03:0,12,182	1/1:10,11:21:11.42:320,11,0	0/0:7,0:14:5.78:0,6,101	0/0:13,0:13:12.04:0,12,186	1/1:5,9:14:8.38:339,8,0	0/0:14,0:15:15.89:0,16,224	0/0:8,0:16:5.14:0,5,62	0/0:24,0:28:40.79:0,41,731	0/0:11,0:19:21.33:0,21,254	0/0:7,0:13:0.68:0,1,42	0/0:16,0:32:28.91:0,29,391	1/1:5,4:10:3.32:81,3,0	1/1:9,11:22:40.15:541,40,0	0/0:6,0:15:15.05:0,15,299	0/0:7,0:7:7.84:0,8,100
chr10	42574369	.	T	TTATA	4057.10	PASS	AC=28;AF=0.875;AN=32;BaseQRankSum=-3.149;DP=190;FS=1.449;HRun=0;HaplotypeScore=42.0711;InbreedingCoeff=0.5141;MQ=97.01;MQ0=2;MQRankSum=-3.905;QD=34.38;ReadPosRankSum=1.776;VQSLOD=3.5428;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,0:9:3:25,3,0	./.	0/0:13,0:13:5.76:0,6,88	0/0:13,0:12:8.31:0,8,203	./.	1/1:4,0:4:6.02:104,6,0	./.	1/1:16,0:15:29.99:462,30,0	1/1:7,0:7:5.99:50,6,0	1/1:5,5:10:21.03:445,21,0	1/1:1,7:8:18.06:431,18,0	./.	./.	./.	1/1:1,9:10:27.09:679,27,0	1/1:3,0:3:3.01:46,3,0	1/1:8,0:8:5.91:51,6,0	1/1:4,13:17:33.11:809,33,0	1/1:5,0:5:5.97:47,6,0	./.	./.	./.	./.	./.	1/1:1,5:6:12.04:300,12,0	1/1:5,7:12:24.08:586,24,0	./.	1/1:2,0:2:2.99:23,3,0
chr10	42576267	.	A	AACT	23998.13	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=15.127;DP=704;FS=0.000;HRun=0;HaplotypeScore=174.0706;InbreedingCoeff=0.9898;MQ=81.01;MQ0=2;MQRankSum=-9.228;QD=48.09;ReadPosRankSum=0.511;VQSLOD=5.5789;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,30:39:99:1879,105,0	1/1:3,7:10:27.09:495,27,0	0/0:33,0:33:79.59:0,80,1331	0/0:23,0:22:39.15:0,39,800	1/1:5,19:24:54.10:952,54,0	1/1:9,25:34:88.54:1738,89,0	1/1:9,22:31:73.67:1317,74,0	1/1:9,20:29:86.66:1574,87,0	1/1:5,20:25:69.23:1325,69,0	0/0:28,0:28:81.28:0,81,1430	0/0:25,0:25:75.26:0,75,1321	1/1:3,15:18:51.17:965,51,0	1/1:4,24:28:76.68:1458,77,0	1/1:8,23:29:73.61:1341,74,0	0/0:31,0:31:90.31:0,90,1579	1/1:0,21:21:63.22:1213,63,0	1/1:1,18:19:48.16:929,48,0	0/0:12,0:12:33.09:0,33,552	1/1:11,12:23:59.36:1101,59,0	1/1:5,22:27:62.03:1186,62,0	1/1:3,16:18:42.14:798,42,0	1/1:14,30:44:99:2199,123,0	1/1:6,19:25:69.07:1227,69,0	1/1:5,10:15:24.63:489,25,0	0/0:22,0:22:63.19:0,63,1082	0/0:31,0:31:93.32:0,93,1641	1/1:12,18:29:87.27:1644,87,0	1/1:3,3:6:9.03:168,9,0
chr10	42576268	.	A	AC	6050.80	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=17.482;DP=666;FS=0.980;HRun=0;HaplotypeScore=200.0331;InbreedingCoeff=0.9776;MQ=82.47;MQ0=2;MQRankSum=-11.872;QD=13.10;ReadPosRankSum=3.070;VQSLOD=5.7308;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:34,2:36:71.02:470,71,0	1/1:10,0:10:25.71:137,26,0	0/0:33,0:33:62.41:0,62,1089	0/0:22,0:21:57.12:0,57,736	1/1:22,0:22:8.36:197,8,0	1/1:27,7:34:65.35:442,65,0	1/1:25,0:25:60.67:336,61,0	1/1:21,0:22:36.52:275,37,0	1/1:22,1:23:42.11:377,42,0	0/0:28,0:28:81.27:0,81,1133	0/0:25,0:25:75.25:0,75,1046	1/1:18,0:18:47.44:261,47,0	1/1:26,0:26:68.95:366,69,0	1/1:26,1:28:45.41:378,45,0	0/0:31,0:31:93.30:0,93,1283	1/1:21,0:21:60.38:342,60,0	1/1:19,0:19:45.41:226,45,0	0/0:12,0:12:33.09:0,33,442	1/1:15,0:17:37.08:209,37,0	1/1:24,0:24:57.36:297,57,0	1/1:17,0:17:40.22:233,40,0	1/1:41,3:44:99:622,111,0	1/1:24,0:24:42.31:301,42,0	1/1:14,0:14:24.08:129,24,0	0/0:22,0:22:63.20:0,63,867	0/0:31,0:31:93.31:0,93,1301	1/1:22,5:27:77.49:413,77,0	1/1:6,0:6:8.50:42,9,0
chr10	42576269	.	G	GT	15318.20	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=16.683;DP=693;FS=3.094;HRun=0;HaplotypeScore=177.8849;InbreedingCoeff=0.9990;MQ=80.94;MQ0=2;MQRankSum=-9.656;QD=31.39;ReadPosRankSum=0.056;VQSLOD=4.3084;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,30:37:96.93:1144,97,0	1/1:2,7:9:27.06:297,27,0	0/0:34,0:34:74.45:0,74,1101	0/0:20,0:19:54.17:0,54,735	1/1:2,19:21:54.13:625,54,0	1/1:8,25:33:93.24:1078,93,0	1/1:5,22:27:75.14:775,75,0	1/1:8,20:28:84.13:879,84,0	1/1:3,20:24:72.07:801,72,0	0/0:28,0:28:81.27:0,81,1133	0/0:28,0:28:75.25:0,75,1041	1/1:7,15:22:63.07:713,63,0	1/1:5,24:29:84.06:953,84,0	1/1:9,23:30:83.73:970,84,0	0/0:31,0:31:93.30:0,93,1283	1/1:2,21:23:66.17:774,66,0	1/1:2,18:20:54:607,54,0	0/0:11,0:11:30.10:0,30,419	1/1:10,12:22:57.10:675,57,0	1/1:4,22:26:69.19:800,69,0	1/1:2,16:17:42.12:494,42,0	1/1:10,30:40:99:1392,117,0	1/1:4,19:23:66.04:730,66,0	1/1:5,10:15:32.81:405,33,0	0/0:22,0:22:63.21:0,63,881	0/0:31,0:31:93.31:0,93,1301	1/1:12,20:30:81.23:951,81,0	1/1:4,3:7:21.04:256,21,0
chr10	42576777	.	TTCTCTCTCTCTCTCTCTCTC	T	819.15	PASS	AB=0.682;AC=9;AF=0.161;AN=56;BaseQRankSum=2.177;DP=469;FS=2.792;HRun=0;HaplotypeScore=215.1366;InbreedingCoeff=0.6002;MQ=74.37;MQ0=11;MQRankSum=-0.377;QD=10.78;ReadPosRankSum=0.707;VQSLOD=2.5961;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:21:18.06:0,18,427	0/0:5,0:5:3.01:0,3,42	0/0:23,0:18:1.25:0,1,3	0/0:36,0:21:6.02:0,6,82	0/0:15,0:15:9.03:0,9,214	0/0:13,0:13:18.06:0,18,394	0/0:21,0:21:27.08:0,27,657	0/0:28,0:28:10.50:0,10,106	0/0:15,0:18:12.04:0,12,439	0/0:9,0:9:8.90:0,9,124	0/0:6,0:5:3.01:0,3,90	1/1:7,6:13:8.77:311,9,0	0/1:8,7:14:0.94:154,0,1	1/1:10,0:9:11.94:201,12,0	0/0:18,0:20:21.04:0,21,760	0/0:24,0:29:42.13:0,42,1292	0/0:20,0:20:18.06:0,18,373	0/0:10,0:9:9.01:0,9,237	0/0:18,0:17:9.57:0,10,145	0/0:14,0:14:15.87:0,16,301	0/0:28,0:27:18.06:0,18,480	1/1:17,0:17:3.01:120,3,0	0/0:9,0:9:0:0,0,0	1/1:20,0:18:5.75:170,6,0	0/0:10,0:10:9.03:0,9,238	0/0:15,0:12:20.10:0,20,609	0/0:14,0:14:11.07:0,11,343	0/0:8,0:6:6.02:0,6,91
chr10	42576811	.	C	CA	68.82	PASS	AB=0.873;AC=3;AF=0.054;AN=56;BaseQRankSum=3.294;DP=470;FS=20.315;HRun=0;HaplotypeScore=63.6391;InbreedingCoeff=-0.0788;MQ=46.51;MQ0=41;MQRankSum=-1.058;QD=1.86;ReadPosRankSum=0.147;VQSLOD=0.5699;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:23:39.13:0,39,539	0/0:7,0:7:12.04:0,12,166	0/0:34,0:2:5.38:0,5,49	0/0:56,0:6:5.77:0,6,80	0/0:10,0:10:15.05:0,15,204	0/0:13,0:13:24.08:0,24,331	0/0:22,0:20:47.74:0,48,642	0/0:14,0:14:36.12:0,36,498	0/0:15,0:15:24.08:0,24,330	0/0:8,0:6:17.42:0,17,216	0/0:8,0:8:9.03:0,9,124	0/0:14,0:13:7.04:0,7,152	0/1:13,0:12:3.24:3,0,186	0/1:13,3:15:99:122,0,238	0/0:22,0:21:44.97:0,45,558	0/0:35,0:35:65.66:0,66,788	0/0:18,0:17:28.85:0,29,526	0/0:16,0:13:33.09:0,33,437	0/0:8,0:7:18.95:0,19,252	0/0:13,0:13:24.33:0,24,254	0/0:25,0:26:36.38:0,36,534	0/1:4,2:7:34.35:34,0,112	0/0:6,3:8:14.78:0,15,177	0/0:8,5:12:1.53:0,2,78	0/0:10,0:9:12.04:0,12,166	0/0:17,0:15:45.14:0,45,608	0/0:10,0:9:21.07:0,21,290	0/0:7,0:5:12.04:0,12,165
chr10	42577085	.	TCA	T	1054.82	PASS	AB=0.904;AC=28;AF=0.519;AN=54;BaseQRankSum=5.950;DP=574;FS=3.569;HRun=0;HaplotypeScore=81.1240;InbreedingCoeff=0.0575;MQ=65.97;MQ0=8;MQRankSum=0.190;QD=2.79;ReadPosRankSum=0.454;VQSLOD=1.3463;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:5.59:0,6,199	0/1:11,0:11:27.52:28,0,67	./.	0/0:27,0:15:0:0,0,0	1/1:7,0:12:5.68:28,6,0	0/1:16,0:15:0.50:34,0,0	1/1:21,9:30:8.78:97,9,0	0/0:22,0:22:5.94:0,6,40	1/1:23,7:31:11.73:111,12,0	0/1:13,2:15:19.86:55,0,20	0/0:17,0:17:15:0,15,181	1/1:21,8:28:15.04:163,15,0	1/1:11,11:23:20.89:209,21,0	0/1:11,3:14:23.46:173,0,23	0/1:20,1:21:14.47:14,0,176	0/0:24,0:24:3:0,3,26	1/1:14,0:24:5.42:28,5,0	0/0:24,0:24:34.60:0,35,435	0/1:14,0:13:8.78:9,0,58	0/1:11,2:13:49.99:50,0,96	0/1:24,6:30:8.58:9,0,160	1/1:6,9:15:6.49:66,6,0	1/1:9,0:16:8.52:42,9,0	0/1:12,0:25:0.01:64,0,0	0/0:16,0:16:15.68:0,16,178	0/1:20,0:19:6.77:7,0,132	0/1:9,2:11:17.86:18,0,122	0/1:4,0:4:15.24:15,0,80
chr10	42577702	.	G	GTC	1347.19	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-6.870;DP=813;FS=5.733;HRun=0;HaplotypeScore=92.1893;InbreedingCoeff=0.9907;MQ=58.21;MQ0=144;MQRankSum=1.175;QD=17.50;ReadPosRankSum=0.033;VQSLOD=2.8743;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:37:87.20:0,87,1063	0/0:13,0:12:27.04:0,27,312	0/0:55,0:30:24.22:0,24,255	0/0:62,0:30:28.11:0,28,247	0/0:36,0:33:68.99:0,69,759	1/1:9,15:19:18.06:300,18,0	1/1:7,17:21:33.11:550,33,0	0/0:34,0:27:57.12:0,57,652	1/1:11,17:18:39.13:638,39,0	0/0:36,0:32:78.18:0,78,924	0/0:23,0:21:48.14:0,48,599	0/0:25,0:18:42.05:0,42,497	0/0:20,0:16:45.11:0,45,551	0/0:14,0:10:21.02:0,21,249	0/0:36,0:28:66.08:0,66,774	0/0:15,0:12:33.03:0,33,384	0/0:29,0:21:54.10:0,54,648	0/0:19,0:14:33.11:0,33,418	0/0:32,0:19:45.14:0,45,572	0/0:38,0:34:60.19:0,60,760	0/0:25,0:22:48.14:0,48,599	0/0:26,0:23:54.05:0,54,611	0/0:22,0:20:39.02:0,39,444	0/0:26,0:19:45.14:0,45,572	0/0:21,0:17:27.09:0,27,342	0/0:34,0:29:75.23:0,75,943	0/0:33,0:27:66.06:0,66,794	0/0:13,0:11:18.06:0,18,224
chr10	42582068	.	TATCATCATCATCATCATC	T	2696.63	PASS	AB=0.929;AC=18;AF=0.321;AN=56;BaseQRankSum=3.346;DP=316;FS=12.565;HRun=0;HaplotypeScore=160.1129;InbreedingCoeff=0.3879;MQ=53.68;MQ0=4;MQRankSum=-0.138;QD=18.22;ReadPosRankSum=-2.387;VQSLOD=1.5645;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:21.08:0,21,238	1/1:3,0:3:3.01:39,3,0	0/0:15,0:13:23.94:0,24,568	0/1:11,0:7:2.23:7,0,2	0/0:10,0:10:17.98:0,18,269	0/1:13,0:13:99:101,0,187	0/1:5,0:5:34.42:49,0,34	0/1:9,26:35:67.66:925,0,68	0/0:10,0:10:24.37:0,24,416	0/0:6,0:7:7.84:0,8,111	0/0:7,0:7:9.03:0,9,266	0/0:2,0:11:6.02:0,6,252	0/0:10,0:10:27.09:0,27,886	0/0:6,0:6:9.03:0,9,516	0/0:12,0:12:18.52:0,19,334	0/1:10,0:10:28.85:111,0,29	0/1:22,0:22:37.09:37,0,2132	0/0:16,0:16:25.82:0,26,644	1/1:21,0:18:41.11:917,41,0	1/1:3,6:9:2.97:20,3,0	1/1:4,0:4:12.01:138,12,0	0/0:9,0:9:3.01:0,3,106	0/0:10,0:10:24.08:0,24,611	0/0:10,0:10:18.06:0,18,660	0/0:12,0:11:20.93:0,21,496	0/0:6,0:6:11.47:0,11,154	1/1:11,0:11:8.96:260,9,0	1/1:4,0:4:9.03:268,9,0
chr10	42582080	.	CATCATCATCATCATCATCATT	C	2975.33	PASS	AB=1.000;AC=18;AF=0.321;AN=56;BaseQRankSum=2.942;DP=277;FS=10.783;HRun=0;HaplotypeScore=157.4418;InbreedingCoeff=0.3925;MQ=50.41;MQ0=6;MQRankSum=0.320;QD=24.19;ReadPosRankSum=-1.470;VQSLOD=1.9361;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:30.27:0,30,488	1/1:2,0:2:3.01:39,3,0	0/0:11,0:9:23.94:0,24,568	0/1:6,0:2:2.23:7,0,2	0/0:12,0:12:23.94:0,24,458	0/1:10,0:10:29.30:29,0,346	0/1:4,0:4:45.82:46,0,84	0/1:28,0:28:67.66:925,0,68	0/0:10,0:10:27.35:0,27,645	0/0:3,0:3:7.84:0,8,111	0/0:6,0:6:9.03:0,9,332	0/0:10,0:10:6.02:0,6,297	0/0:10,0:10:27.09:0,27,983	0/0:4,0:4:9.03:0,9,637	0/0:11,0:11:18.52:0,19,406	0/1:10,0:10:28.85:151,0,29	0/1:21,0:21:45.17:45,0,2733	0/0:13,0:13:28.91:0,29,864	1/1:4,15:15:45.07:1142,45,0	1/1:7,0:7:2.97:20,3,0	1/1:4,0:4:12.01:138,12,0	0/0:8,0:8:3.01:0,3,129	0/0:9,0:9:24.08:0,24,713	0/0:8,0:9:18.06:0,18,724	0/0:12,0:11:20.96:0,21,569	0/0:9,0:8:17.41:0,17,218	1/1:1,8:9:8.96:341,9,0	1/1:3,0:3:9.03:268,9,0
chr10	42582083	.	CATCATCATCATCATCATTATT	C	2023.56	PASS	AB=0.964;AC=22;AF=0.393;AN=56;BaseQRankSum=3.754;DP=268;FS=0.000;HRun=0;HaplotypeScore=156.6699;InbreedingCoeff=0.0653;MQ=50.45;MQ0=7;MQRankSum=-0.248;QD=12.49;ReadPosRankSum=2.461;VQSLOD=2.3175;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:16,0:16:20.94:21,0,405	1/1:1,0:1:2.97:20,3,0	0/0:9,0:7:15.02:0,15,372	0/0:4,0:2:2.74:0,3,12	0/0:11,0:11:23.94:0,24,482	0/1:11,0:11:83.94:84,0,422	0/1:4,0:4:88.95:92,0,89	0/1:27,0:27:70.74:377,0,71	0/1:10,0:10:2.61:3,0,603	0/1:3,0:3:13.86:14,0,44	0/1:5,0:5:3.02:3,0,320	0/0:10,0:10:6.02:0,6,272	0/0:10,0:10:30.05:0,30,894	0/0:3,0:3:9.03:0,9,645	0/1:10,0:10:21.13:21,0,306	0/1:2,7:9:11:170,0,11	0/0:20,0:20:57.06:0,57,3023	0/1:14,0:14:25.13:25,0,896	1/1:20,0:15:31.81:802,32,0	0/1:7,0:7:0:0,0,0	1/1:4,0:4:5.96:44,6,0	0/0:8,0:8:5.98:0,6,164	0/0:10,0:10:27.09:0,27,615	0/0:8,0:8:17.98:0,18,626	0/0:13,0:12:7.91:0,8,480	0/1:9,0:8:22.43:22,0,150	1/1:9,0:9:6.02:284,6,0	1/1:3,0:3:8.99:207,9,0
chr10	42582095	.	CATCATT	C	1146.13	PASS	AB=1.000;AC=26;AF=0.520;AN=50;BaseQRankSum=-0.863;DP=227;FS=3.936;HRun=0;HaplotypeScore=84.9371;InbreedingCoeff=-0.2962;MQ=49.46;MQ0=6;MQRankSum=-1.692;QD=6.23;ReadPosRankSum=0.536;VQSLOD=0.9274;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:11:14.85:126,15,0	./.	0/0:2,0:1:3.01:0,3,47	./.	0/1:8,0:8:19.37:19,0,129	0/1:10,0:10:73.09:93,0,73	0/1:2,0:2:20.87:21,0,22	0/1:34,0:32:84.82:85,0,93	1/1:9,0:9:0.01:125,0,0	0/1:2,0:2:15.99:20,0,16	0/1:4,0:4:23.98:24,0,49	0/0:9,0:9:2.84:0,3,14	0/1:10,0:10:64.82:105,0,65	0/0:3,0:3:8.79:0,9,52	0/1:5,0:5:39.45:55,0,39	1/1:7,0:7:3.01:42,3,0	0/0:20,0:20:15.33:0,15,885	0/1:13,0:13:53.48:53,0,143	1/1:19,0:17:7.90:192,8,0	./.	0/0:1,0:1:0:0,0,0	1/1:0,5:5:3.01:71,3,0	0/1:9,0:9:15.73:74,0,16	0/1:7,0:7:9.38:34,0,9	0/1:11,0:10:16.33:16,0,146	0/1:7,0:6:25.04:53,0,25	1/1:8,0:8:5.99:67,6,0	0/1:3,0:3:3.08:15,0,3
chr10	42582960	.	T	TA	554.82	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-5.493;DP=655;FS=2.866;HRun=9;HaplotypeScore=65.6582;InbreedingCoeff=0.9553;MQ=75.37;MQ0=0;MQRankSum=-1.501;QD=17.90;ReadPosRankSum=0.336;VQSLOD=3.7764;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,24:31:17.09:645,17,0	0/0:0,0:11:20.37:0,20,60	0/0:23,0:23:46.96:0,47,386	0/0:8,0:7:11.98:0,12,103	0/0:24,0:24:65.97:0,66,570	0/0:40,0:40:98.95:0,99,855	0/0:25,0:25:59.97:0,60,521	0/0:28,0:28:71.97:0,72,625	0/0:21,0:21:59.98:0,60,521	0/0:26,0:26:62.33:0,62,525	0/0:23,0:23:47.92:0,48,404	0/0:32,0:32:83.96:0,84,726	0/0:20,0:20:50.96:0,51,438	0/0:16,0:16:44.99:0,45,390	0/0:20,0:19:56.99:0,57,495	0/0:18,0:18:47.99:0,48,417	0/0:30,0:30:68.96:0,69,599	0/0:27,0:27:71.93:0,72,612	0/0:22,0:22:50.96:0,51,440	0/0:28,0:28:71.77:0,72,598	0/0:14,0:14:41.96:0,42,356	0/0:31,0:31:80.94:0,81,699	0/0:14,0:14:38.95:0,39,329	0/0:18,0:18:53.97:0,54,465	0/0:28,0:28:77.98:0,78,677	0/0:28,1:29:50.75:0,51,657	0/0:30,0:30:71.95:0,72,620	0/0:18,0:18:44.99:0,45,390
chr10	42585219	.	A	AGT	755.17	PASS	AB=0.979;AC=28;AF=0.519;AN=54;BaseQRankSum=1.419;DP=884;FS=7.343;HRun=0;HaplotypeScore=140.7563;InbreedingCoeff=0.0481;MQ=46.53;MQ0=68;MQRankSum=-2.176;QD=1.30;ReadPosRankSum=-1.554;VQSLOD=1.9183;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:32:11.99:0,12,120	1/1:7,0:6:2.73:25,3,0	./.	0/1:50,0:20:0:0,0,0	0/0:25,0:23:6.57:0,7,56	0/1:19,1:18:12.53:13,0,27	0/1:48,0:32:58.52:162,0,59	1/1:29,0:23:8.31:48,8,0	1/1:39,0:35:10.96:62,11,0	0/1:29,0:23:29.31:29,0,63	1/1:16,0:14:3.01:45,3,0	0/0:35,0:31:13.98:0,14,232	0/1:23,0:20:3.21:3,0,72	0/0:51,0:40:16.44:0,16,222	0/1:41,1:38:28.78:105,0,29	1/1:29,0:23:0.25:20,0,0	1/1:37,1:35:12.85:106,13,0	0/1:22,0:18:36.57:37,0,56	0/0:38,0:15:2.39:0,2,31	0/1:18,0:17:0:0,0,0	1/1:77,0:46:0.47:1,0,0	0/0:15,0:16:5.85:0,6,47	0/1:15,1:15:36.62:37,0,58	0/0:53,0:49:29.95:0,30,318	0/1:22,2:24:52.22:119,0,52	0/1:22,1:19:28.12:87,0,28	0/1:18,0:14:1.60:2,0,4	1/1:8,0:8:0.29:3,0,0
chr10	42585245	.	TGTGTGTGC	T	747.74	PASS	AB=0.981;AC=21;AF=0.404;AN=52;BaseQRankSum=1.681;DP=806;FS=6.393;HRun=0;HaplotypeScore=145.5390;InbreedingCoeff=0.1529;MQ=30.16;MQ0=79;MQRankSum=-3.929;QD=1.84;ReadPosRankSum=-3.887;VQSLOD=1.0667;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:37:11.78:0,12,156	1/1:8,0:7:5.62:49,6,0	./.	./.	0/0:23,0:22:10.50:0,11,101	0/1:22,0:18:20.04:25,0,20	0/1:61,0:35:22.33:22,0,91	1/1:28,0:16:1.86:159,2,0	1/1:36,0:30:1.60:38,2,0	0/0:33,0:26:20.04:0,20,417	0/0:17,0:11:3.01:0,3,38	0/0:42,0:38:2.94:0,3,373	0/0:24,0:19:6.27:0,6,84	0/0:46,0:36:1.40:0,1,360	0/1:39,0:32:6.02:6,0,39	0/1:24,3:21:5.83:89,0,6	0/1:29,1:24:22:180,0,22	0/1:27,0:16:21.57:22,0,157	0/1:24,0:13:15.06:107,0,15	1/1:10,2:11:3:25,3,0	1/1:72,1:38:2.99:25,3,0	0/0:15,0:15:5.93:0,6,102	0/0:15,0:15:9.01:0,9,163	0/0:45,0:37:29.92:0,30,670	0/0:34,0:30:13.17:0,13,258	0/0:33,0:25:27.20:0,27,363	1/1:11,0:7:8.73:70,9,0	1/1:7,0:6:1.64:84,2,0
chr10	42585249	.	TGTGC	T	703.98	PASS	AB=0.991;AC=25;AF=0.481;AN=52;BaseQRankSum=2.903;DP=769;FS=3.039;HRun=0;HaplotypeScore=126.8077;InbreedingCoeff=-0.0052;MQ=29.63;MQ0=79;MQRankSum=-3.256;QD=1.43;ReadPosRankSum=-4.243;VQSLOD=1.1722;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:45,2:36:11.91:0,12,97	1/1:8,0:7:5.99:50,6,0	./.	./.	0/0:23,0:22:9.59:0,10,87	0/1:22,0:18:4.80:69,0,5	0/1:59,2:33:57.88:62,0,58	1/1:28,0:13:7.52:92,8,0	0/1:35,0:29:13.44:25,0,13	0/1:30,1:24:12.40:12,0,340	0/0:17,0:11:3.01:0,3,37	0/0:41,0:37:0.50:0,0,310	0/1:23,0:18:42.43:42,0,58	0/0:42,1:33:14.47:0,14,309	0/1:36,0:30:26.13:26,0,34	1/1:27,0:21:9.27:65,9,0	0/1:29,0:23:8.11:169,0,8	0/1:24,1:14:54.57:55,0,115	0/1:20,0:11:19.84:49,0,20	1/1:12,0:11:3:25,3,0	1/1:64,3:34:3:25,3,0	0/1:15,0:15:21.13:21,0,53	0/0:15,0:15:9.01:0,9,144	0/0:42,0:34:29.93:0,30,546	0/1:36,0:32:6.80:7,0,189	0/0:33,0:27:18.51:0,19,313	1/1:11,0:7:4.16:29,4,0	1/1:7,0:6:6.38:40,6,0
chr10	42585251	.	TGC	T	879.45	PASS	AB=0.988;AC=28;AF=0.538;AN=52;BaseQRankSum=2.607;DP=740;FS=5.807;HRun=0;HaplotypeScore=119.3175;InbreedingCoeff=-0.0931;MQ=29.22;MQ0=75;MQRankSum=-2.910;QD=1.47;ReadPosRankSum=-3.809;VQSLOD=0.8273;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:35:11.65:0,12,73	1/1:8,0:7:5.99:50,6,0	./.	./.	0/1:21,0:20:9.10:9,0,49	0/1:22,0:18:4.40:70,0,4	0/1:57,3:32:29.56:89,0,30	1/1:27,0:13:3.22:121,3,0	0/1:35,0:29:3.54:49,0,4	0/1:31,0:24:36.05:36,0,200	0/0:18,0:12:2.96:0,3,19	0/1:40,0:36:18.68:19,0,193	0/1:23,0:18:2.94:3,0,50	0/1:42,0:32:0.65:1,0,220	0/1:34,1:29:16.47:59,0,16	1/1:26,0:20:9.14:56,9,0	0/1:27,1:22:3.96:182,0,4	0/1:25,0:14:69.27:69,0,98	0/1:17,1:11:16.68:64,0,17	1/1:11,0:10:3:25,3,0	1/1:63,0:32:2.98:25,3,0	0/0:15,0:15:4.83:0,5,39	0/0:13,1:14:9.01:0,9,113	0/0:39,1:32:29.85:0,30,354	0/1:34,0:30:6.81:7,0,115	0/1:34,0:26:2.28:2,0,196	1/1:9,0:5:8.72:59,9,0	1/1:7,0:6:1.71:33,2,0
chr10	42585265	.	TGA	T	491.45	PASS	AB=0.978;AC=24;AF=0.480;AN=50;BaseQRankSum=1.504;DP=707;FS=6.983;HRun=0;HaplotypeScore=105.0959;InbreedingCoeff=-0.3340;MQ=25.89;MQ0=91;MQRankSum=-0.176;QD=0.97;ReadPosRankSum=1.269;VQSLOD=1.5219;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:33:2.88:0,3,25	1/1:9,0:8:2.78:13,3,0	./.	./.	1/1:10,5:13:5.58:46,6,0	0/0:24,2:20:2.76:0,3,79	0/1:58,0:27:20.72:30,0,21	0/1:23,2:10:58.34:91,0,58	0/1:37,0:29:23.05:23,0,121	0/1:34,0:26:49.89:50,0,136	1/1:17,0:12:2.74:12,3,0	0/1:32,1:27:58.34:60,0,58	1/1:18,0:14:1.46:48,1,0	0/1:37,0:25:18.22:28,0,18	0/0:25,0:21:2.49:0,2,9	0/1:25,0:18:19.56:32,0,20	0/1:20,3:16:6.48:64,0,6	0/1:27,0:13:9.15:9,0,68	0/1:22,0:9:10.69:11,0,57	./.	0/0:67,0:26:0.47:0,0,1	0/1:15,0:15:6.55:7,0,16	0/0:12,0:12:2.98:0,3,22	0/1:35,0:27:19.82:20,0,63	0/1:32,0:28:11.44:11,0,38	0/1:37,0:30:34.95:35,0,245	1/1:6,0:3:5.91:38,6,0	0/0:6,0:5:7.03:0,7,23
chr10	42585267	.	AGT	A	793.40	PASS	AB=0.900;AC=22;AF=0.458;AN=48;BaseQRankSum=-3.774;DP=708;FS=7.843;HRun=0;HaplotypeScore=105.7531;InbreedingCoeff=0.1040;MQ=25.72;MQ0=91;MQRankSum=0.078;QD=1.74;ReadPosRankSum=-0.243;VQSLOD=1.4229;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:39,2:32:0.01:0,0,0	0/0:9,0:8:0.47:0,0,1	./.	./.	0/1:14,0:12:0.01:0,0,0	0/0:26,0:20:14.59:0,15,224	0/1:57,4:29:9.86:10,0,33	0/1:23,1:9:25.51:72,0,26	0/0:41,1:33:6.94:0,7,147	0/1:26,6:25:72.17:194,0,72	1/1:12,5:12:3.01:37,3,0	0/1:30,3:27:7.69:25,0,8	0/1:13,4:14:35.76:97,0,36	1/1:32,4:24:6.47:64,6,0	0/1:23,5:22:0:0,0,0	1/1:22,3:18:2.49:17,2,0	0/0:26,0:17:8.36:0,8,43	0/0:26,1:13:10.59:0,11,69	0/0:22,0:10:11.45:0,11,84	./.	./.	1/1:10,4:14:3.01:37,3,0	1/1:12,0:12:3:25,3,0	0/1:33,2:27:7.04:122,0,7	1/1:25,5:26:6.02:75,6,0	0/1:28,8:29:65.57:152,0,66	0/0:5,0:3:1.25:0,1,3	0/0:6,0:5:4.50:0,5,17
chr10	42585281	.	TGA	T	790.54	PASS	AB=0.987;AC=31;AF=0.620;AN=50;BaseQRankSum=-0.555;DP=675;FS=1.752;HRun=0;HaplotypeScore=97.5608;InbreedingCoeff=0.1493;MQ=24.00;MQ0=96;MQRankSum=-1.530;QD=1.64;ReadPosRankSum=0.829;VQSLOD=2.0004;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:32:0.25:0,0,1	0/1:10,0:8:7.21:10,0,7	./.	./.	0/0:13,0:11:0.37:0,0,1	0/0:27,0:21:12.53:0,13,292	0/1:56,0:27:5.46:5,0,11	0/1:21,0:8:1.15:57,0,1	0/0:40,0:29:19.65:0,20,203	1/1:38,0:29:13.32:237,13,0	1/1:15,0:12:2.74:12,3,0	1/1:30,0:20:6.67:37,7,0	0/1:14,0:12:33.57:63,0,34	1/1:34,0:23:9.14:53,9,0	0/1:32,0:24:0:0,0,0	1/1:23,0:16:11.22:69,11,0	0/1:26,0:17:24.60:48,0,25	0/1:24,0:12:23.52:24,0,75	0/1:20,1:8:0.32:0,0,48	1/1:18,0:16:2.80:13,3,0	0/0:60,1:26:0.47:0,0,1	1/1:12,0:12:2.48:11,2,0	./.	1/1:35,0:26:8.76:39,9,0	1/1:25,1:22:5.48:24,5,0	0/1:28,1:22:4.01:173,0,4	1/1:8,1:5:5.70:29,6,0	1/1:6,0:5:5.05:21,5,0
chr10	42585283	.	AGT	A	827.79	PASS	AB=0.853;AC=21;AF=0.500;AN=42;BaseQRankSum=-3.121;DP=670;FS=0.000;HRun=0;HaplotypeScore=98.0270;InbreedingCoeff=0.2565;MQ=23.84;MQ0=96;MQRankSum=-1.966;QD=2.55;ReadPosRankSum=-1.086;VQSLOD=1.9544;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:36,3:33:0:0,0,0	0/0:5,5:8:0.47:0,0,1	./.	./.	./.	0/0:23,0:17:18.51:0,19,199	0/0:53,0:25:0.32:0,0,3	1/1:16,4:8:11.88:144,12,0	0/0:40,0:28:11.33:0,11,139	0/1:29,8:29:2.41:282,0,2	./.	1/1:28,1:20:1.12:5,1,0	0/1:13,2:13:34.96:39,0,35	1/1:35,0:24:0.42:1,0,0	./.	1/1:19,5:17:5.93:73,6,0	0/0:24,2:17:8.02:0,8,42	0/1:22,2:12:13.16:13,0,76	0/0:22,1:9:8.23:0,8,64	1/1:12,5:15:2.80:13,3,0	./.	1/1:12,1:13:2.96:25,3,0	./.	1/1:34,1:26:2.64:12,3,0	0/0:21,4:21:2.63:0,3,12	0/1:18,10:21:14.32:300,0,14	0/0:5,3:4:0.89:0,1,2	1/1:4,2:5:5.97:45,6,0
chr10	42585297	.	TGC	T	767.58	PASS	AB=0.989;AC=29;AF=0.659;AN=44;BaseQRankSum=0.214;DP=549;FS=3.476;HRun=0;HaplotypeScore=76.5574;InbreedingCoeff=0.2209;MQ=23.28;MQ0=77;MQRankSum=-2.845;QD=1.98;ReadPosRankSum=-1.619;VQSLOD=1.1697;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:24:0.07:0,0,0	0/0:9,0:7:0:0,0,0	./.	./.	./.	0/0:24,1:18:8.99:0,9,282	1/1:37,0:15:1.40:4,1,0	1/1:11,0:4:11.96:93,12,0	0/0:31,0:22:11.16:0,11,179	1/1:33,0:25:9.99:229,10,0	./.	1/1:27,0:14:6.54:27,7,0	0/1:14,0:10:5.12:58,0,5	1/1:25,2:18:0.71:12,1,0	0/1:29,0:23:0:0,0,0	1/1:15,1:11:6.02:73,6,0	1/1:20,0:10:5.54:28,6,0	0/1:24,0:12:63.21:63,0,72	0/1:15,0:8:3.58:4,0,32	1/1:11,1:12:3:26,3,0	./.	1/1:14,1:13:2.96:25,3,0	./.	1/1:24,1:16:2.74:13,3,0	0/1:24,1:20:0.14:0,0,0	0/1:23,1:21:24.40:189,0,24	0/0:8,0:5:2.94:0,3,18	1/1:5,0:4:5.97:45,6,0
chr10	42585305	.	TGA	T	283.45	PASS	AB=0.974;AC=15;AF=0.357;AN=42;BaseQRankSum=2.651;DP=628;FS=0.000;HRun=0;HaplotypeScore=85.0449;InbreedingCoeff=-0.0638;MQ=22.53;MQ0=95;MQRankSum=-1.774;QD=1.03;ReadPosRankSum=0.426;VQSLOD=1.0553;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:22:0.35:0,0,1	./.	./.	./.	./.	0/0:21,1:16:17.68:0,18,142	0/0:41,0:18:0.30:0,0,1	0/1:11,0:7:9.61:10,0,91	0/0:36,0:24:11.86:0,12,97	0/1:43,1:32:58.99:59,0,206	./.	0/1:33,1:21:20.78:24,0,21	0/1:16,3:16:44.63:45,0,97	0/0:32,0:21:1.74:0,2,7	0/1:32,0:25:0:0,0,0	1/1:18,0:11:6.02:73,6,0	0/1:23,0:12:14.02:24,0,14	0/1:28,0:14:14.48:38,0,14	0/1:18,1:9:27.59:28,0,183	1/1:13,0:11:3.01:43,3,0	./.	0/0:15,1:12:0.39:0,0,1	./.	0/0:28,0:16:0.47:0,0,1	0/0:25,0:19:0.36:0,0,1	0/1:27,0:21:11.92:12,0,180	0/0:10,0:6:5.91:0,6,58	1/1:6,0:4:5.96:44,6,0
chr10	42585307	.	AGT	A	182.69	PASS	AB=0.970;AC=17;AF=0.405;AN=42;BaseQRankSum=1.812;DP=640;FS=13.320;HRun=0;HaplotypeScore=85.1950;InbreedingCoeff=0.1975;MQ=22.51;MQ0=99;MQRankSum=-1.321;QD=0.62;ReadPosRankSum=0.866;VQSLOD=0.5638;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:20:0.02:0,0,0	./.	./.	./.	./.	0/0:22,0:17:1.77:0,2,7	0/1:43,0:19:0.01:0,0,0	0/1:14,2:9:33.81:60,0,34	0/0:35,0:24:6.24:0,6,30	0/0:46,0:31:6.90:0,7,274	./.	0/0:36,0:23:5:0,5,45	0/0:22,0:17:7.11:0,7,165	0/0:32,0:21:2.80:0,3,7	0/1:30,1:25:0.13:0,0,0	1/1:15,1:10:5.88:37,6,0	0/0:25,0:14:2.21:0,2,34	1/1:25,1:13:7.42:58,7,0	0/1:16,0:9:8.44:8,0,199	1/1:10,5:12:2.97:26,3,0	./.	1/1:14,0:10:0.46:1,0,0	./.	0/1:28,0:17:0.03:0,0,0	0/1:26,0:20:0.14:0,0,0	0/1:23,4:20:99:100,0,135	0/0:8,2:6:6.02:0,6,84	0/1:8,0:5:0.96:1,0,41
chr10	42585315	.	TGTGTGA	T	32.83	PASS	AB=0.990;AC=15;AF=0.326;AN=46;BaseQRankSum=1.519;DP=765;FS=5.905;HRun=0;HaplotypeScore=105.9765;InbreedingCoeff=0.0838;MQ=21.46;MQ0=128;MQRankSum=-0.601;QD=0.09;ReadPosRankSum=-1.822;VQSLOD=1.2182;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:34,0:24:0.41:0,0,0	./.	./.	./.	./.	0/0:23,0:15:15.83:0,16,273	0/1:47,0:19:0.19:0,0,0	0/1:25,0:12:3.38:3,0,117	0/0:40,0:25:11.86:0,12,153	0/1:51,0:34:1.11:1,0,414	./.	0/0:35,1:21:5.19:0,5,39	0/1:25,1:19:23.08:23,0,223	0/0:39,0:25:2.35:0,2,25	0/1:31,0:23:0:0,0,0	0/0:23,0:14:6.39:0,6,43	0/0:21,2:12:4.98:0,5,36	1/1:29,0:14:7.66:43,8,0	0/1:19,0:11:4.73:5,0,159	0/1:17,0:14:34.89:46,0,35	0/0:103,0:44:1.72:0,2,4	1/1:18,1:13:0.36:0,0,0	0/1:12,1:13:0:0,0,0	0/0:32,1:20:0.47:0,0,1	0/0:26,0:21:0.47:0,0,1	0/1:33,0:21:2.57:3,0,308	0/0:13,0:7:7.38:0,7,75	0/1:9,0:6:10.27:10,0,75
chr10	42585319	.	TGA	T	164.95	PASS	AB=0.998;AC=11;AF=0.239;AN=46;BaseQRankSum=1.020;DP=784;FS=4.407;HRun=0;HaplotypeScore=97.8939;InbreedingCoeff=0.0836;MQ=21.17;MQ0=136;MQRankSum=-0.703;QD=0.56;ReadPosRankSum=-1.182;VQSLOD=1.4545;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:23:0.05:0,0,1	./.	./.	./.	./.	0/0:21,0:14:13.47:0,13,49	0/1:52,1:22:0.09:0,0,0	0/1:28,0:13:15.38:15,0,60	0/0:41,0:24:11.28:0,11,68	0/1:54,0:35:48.36:48,0,351	./.	0/0:37,0:21:0.42:0,0,45	0/1:27,0:20:26.01:26,0,156	0/0:41,0:27:4.58:0,5,27	0/1:31,0:23:0:0,0,0	0/0:25,0:16:0.03:0,0,1	0/0:25,0:13:8.46:0,8,74	1/1:25,1:12:16.31:124,16,0	0/0:19,0:11:15.63:0,16,191	0/1:19,0:16:7.87:8,0,15	0/0:106,0:45:1.72:0,2,4	0/0:20,0:14:0.36:0,0,0	0/1:13,0:12:0:0,0,0	0/0:34,1:21:0.47:0,0,1	0/0:25,0:20:0.36:0,0,1	0/1:33,0:20:42.79:43,0,197	0/0:13,0:7:6.90:0,7,74	0/1:9,0:6:10.25:10,0,63
chr10	42585328	.	G	GTA	41.93	PASS	AB=0.970;AC=13;AF=0.271;AN=48;BaseQRankSum=0.230;DP=929;FS=4.236;HRun=0;HaplotypeScore=114.3016;InbreedingCoeff=0.2840;MQ=21.04;MQ0=160;MQRankSum=-0.646;QD=0.11;ReadPosRankSum=0.990;VQSLOD=1.4467;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:36,0:22:0.47:1,0,0	0/0:6,0:2:0:0,0,0	./.	./.	./.	0/0:23,0:17:14.86:0,15,72	0/0:69,0:31:2.78:0,3,18	0/0:34,0:11:29.64:0,30,326	0/0:52,0:31:14.54:0,15,113	0/0:62,0:40:79.22:0,79,711	./.	0/1:42,1:25:44.63:49,0,45	0/1:28,2:21:75.09:75,0,157	0/0:51,0:36:8.22:0,8,76	0/1:35,0:25:0:0,0,0	0/0:34,0:23:5.96:0,6,63	0/0:32,0:19:6.73:0,7,116	0/0:29,0:14:8.98:0,9,49	0/0:19,0:8:12.48:0,12,127	0/0:19,0:16:4.24:0,4,50	1/1:139,0:55:0.46:1,0,0	1/1:25,0:18:0.94:1,1,0	0/1:13,1:13:0:0,0,0	0/1:40,0:25:0:0,0,0	1/1:26,0:21:0.44:1,0,0	0/0:42,0:25:58.71:0,59,469	0/0:15,0:8:6.82:0,7,92	0/0:9,0:5:3.01:0,3,46
chr10	42585331	.	TGA	T	202.77	PASS	AB=0.975;AC=11;AF=0.239;AN=46;BaseQRankSum=-0.545;DP=962;FS=3.009;HRun=0;HaplotypeScore=113.1565;InbreedingCoeff=0.0575;MQ=21.43;MQ0=165;MQRankSum=-0.624;QD=0.57;ReadPosRankSum=-3.108;VQSLOD=1.1440;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:37,0:23:0.14:0,0,0	./.	./.	./.	./.	0/0:25,0:19:17.33:0,17,245	0/0:73,0:32:1.58:0,2,5	0/1:31,3:11:9.34:115,0,9	0/0:51,0:30:17.51:0,18,222	0/0:61,0:39:18.57:0,19,802	./.	0/1:43,2:27:38.62:39,0,78	0/0:31,0:22:11.68:0,12,201	0/1:51,1:37:33.19:33,0,49	0/1:37,0:26:0:0,0,0	0/0:32,2:23:5.90:0,6,39	0/0:35,1:21:4.39:0,4,115	0/1:28,1:15:43.58:47,0,44	0/1:20,1:8:51.59:52,0,122	0/0:14,5:16:3.95:0,4,38	0/0:147,2:61:1.72:0,2,4	0/0:25,1:19:0.94:0,1,1	0/1:14,0:13:0:0,0,0	1/1:39,2:26:2.98:22,3,0	0/0:25,0:20:0.36:0,0,1	0/1:43,0:26:5.24:5,0,473	0/0:13,2:8:7.79:0,8,82	0/0:10,0:6:6:0,6,82
chr10	42585333	.	A	AGT	749.71	PASS	AB=0.955;AC=20;AF=0.435;AN=46;BaseQRankSum=-0.093;DP=998;FS=2.688;HRun=0;HaplotypeScore=121.3741;InbreedingCoeff=-0.1271;MQ=21.70;MQ0=171;MQRankSum=0.274;QD=0.96;ReadPosRankSum=-2.345;VQSLOD=2.1325;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:31,6:23:0.47:1,0,0	./.	./.	./.	./.	0/0:26,0:20:12.86:0,13,132	0/1:74,3:37:12.34:12,0,17	0/0:28,0:11:26.18:0,26,107	0/0:47,3:30:4.02:0,4,105	0/1:58,8:41:99:433,0,307	./.	0/1:42,4:28:19.65:99,0,20	0/1:29,6:24:16.40:16,0,131	0/1:47,8:40:20.89:128,0,21	0/1:37,1:28:0:0,0,0	0/1:35,0:24:0.01:0,0,0	0/1:37,0:22:16.94:17,0,97	0/1:31,0:17:53.91:54,0,54	0/1:23,0:9:24.90:25,0,64	1/1:19,0:17:1.55:4,2,0	0/1:146,0:60:0.01:0,0,0	0/0:25,4:22:0.47:0,0,1	0/1:14,2:15:0:0,0,0	1/1:42,2:27:3.01:46,3,0	0/1:28,0:23:0.01:0,0,0	0/1:41,0:24:27.61:28,0,279	0/0:14,0:8:3.81:0,4,36	0/0:10,0:6:5.85:0,6,52
chr10	42585357	.	TGA	T	589.65	PASS	AB=0.988;AC=15;AF=0.300;AN=50;BaseQRankSum=1.157;DP=1196;FS=1.231;HRun=0;HaplotypeScore=148.8663;InbreedingCoeff=-0.0502;MQ=24.28;MQ0=198;MQRankSum=-1.949;QD=1.21;ReadPosRankSum=-0.613;VQSLOD=2.0865;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:25:3.32:0,3,26	./.	./.	./.	0/1:30,0:24:0.94:1,0,67	0/0:28,0:22:1.33:0,1,50	0/0:81,0:39:2.90:0,3,20	0/1:54,0:13:36.49:36,0,41	0/0:57,0:37:10.23:0,10,147	0/1:73,0:49:99:238,0,361	1/1:27,2:23:2.74:12,3,0	0/0:67,4:51:1.27:0,1,362	0/0:44,1:31:9.48:0,9,185	0/0:62,2:47:20.74:0,21,272	1/1:44,0:34:0.89:2,1,0	0/1:38,0:25:0.03:0,0,1	0/1:44,0:32:36.22:36,0,302	0/1:36,1:21:69.76:70,0,84	0/0:33,1:15:12.12:0,12,130	0/0:28,1:24:1.12:0,1,36	0/0:155,0:68:1.72:0,2,4	0/1:39,2:31:10.21:10,0,129	0/0:24,1:24:9.49:0,9,139	0/0:59,0:42:9.02:0,9,172	1/1:26,0:20:2.93:19,3,0	0/1:54,0:34:99:285,0,135	0/1:16,0:9:1.40:1,0,59	0/0:8,0:5:6.02:0,6,100
chr10	42585359	.	AGT	A	1357.67	PASS	AB=0.897;AC=15;AF=0.313;AN=48;BaseQRankSum=-0.716;DP=1194;FS=2.094;HRun=0;HaplotypeScore=147.0258;InbreedingCoeff=0.0332;MQ=24.58;MQ0=196;MQRankSum=-2.437;QD=2.44;ReadPosRankSum=0.146;VQSLOD=2.6948;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:25:5.87:0,6,92	./.	./.	./.	0/0:25,4:24:8.90:0,9,110	1/1:26,1:21:3.58:33,4,0	0/1:81,3:39:0.33:0,0,0	0/1:54,2:16:54.54:75,0,55	0/1:53,3:36:19.61:20,0,154	0/1:59,13:49:99:564,0,126	1/1:23,5:23:3.01:37,3,0	0/0:71,0:51:23.99:0,24,443	0/1:42,3:31:11.13:11,0,181	0/0:65,0:49:10.46:0,10,310	./.	0/1:32,6:25:0.24:0,0,0	0/0:45,0:32:23.92:0,24,451	0/1:29,5:20:31.98:156,0,32	0/1:34,1:16:24.95:25,0,64	0/0:22,8:25:2.88:0,3,37	0/0:152,1:68:1.25:0,1,3	0/0:39,2:31:9.86:0,10,147	0/0:25,1:25:8.91:0,9,145	0/0:57,1:42:9.02:0,9,148	1/1:21,5:20:2.87:35,3,0	0/1:31,24:35:66.71:534,0,67	0/0:13,3:9:6.67:0,7,54	0/0:8,0:5:6.02:0,6,85
chr10	42585409	.	TGA	T	222.91	PASS	AB=0.978;AC=9;AF=0.173;AN=52;BaseQRankSum=4.111;DP=885;FS=1.564;HRun=0;HaplotypeScore=178.3980;InbreedingCoeff=0.5328;MQ=34.04;MQ0=100;MQRankSum=-7.346;QD=1.64;ReadPosRankSum=-2.640;VQSLOD=2.1604;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:31:14.64:0,15,242	0/1:13,1:13:3.49:30,0,3	./.	./.	0/0:19,0:19:20.94:0,21,352	0/0:27,0:24:11.65:0,12,407	0/0:52,0:35:27.08:0,27,479	0/1:35,0:19:73.92:93,0,74	0/1:41,0:30:5.42:5,0,271	0/0:52,0:40:82.85:0,83,1390	0/0:19,0:17:18.05:0,18,312	0/0:61,0:51:64.93:0,65,1121	0/0:27,0:22:13.97:0,14,400	0/0:46,1:40:18.87:0,19,614	0/0:23,0:17:2.58:0,3,57	1/1:29,0:20:6.43:37,6,0	0/0:44,0:32:49.05:0,49,1007	0/0:27,1:20:29.79:0,30,518	0/0:22,0:8:17.94:0,18,149	0/0:34,1:31:3.22:0,3,6	0/0:94,1:51:0.34:0,0,1	0/0:26,0:22:39.56:0,40,659	0/0:23,0:22:33.29:0,33,514	0/0:57,1:47:59.99:0,60,1019	0/0:21,0:19:12.02:0,12,196	0/0:30,0:26:57.14:0,57,735	1/1:8,1:8:10.66:108,11,0	1/1:8,0:6:11.92:89,12,0
chr10	42585411	.	AGT	A	504.28	PASS	AB=0.846;AC=13;AF=0.250;AN=52;BaseQRankSum=0.890;DP=833;FS=4.543;HRun=0;HaplotypeScore=171.3471;InbreedingCoeff=0.6231;MQ=34.85;MQ0=92;MQRankSum=-6.855;QD=2.01;ReadPosRankSum=-1.517;VQSLOD=2.1964;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,1:28:14.89:0,15,227	0/1:6,7:13:3.18:56,0,3	./.	./.	0/0:17,1:19:21.07:0,21,335	0/0:24,0:21:24.97:0,25,387	0/0:50,0:34:29.98:0,30,435	1/1:24,7:18:29.88:350,30,0	0/0:37,0:28:0.64:0,1,230	0/0:50,0:40:86.35:0,86,1288	0/0:17,0:15:18.06:0,18,290	0/0:58,0:49:65.26:0,65,971	0/0:25,2:23:25.94:0,26,381	0/1:42,1:37:0.55:1,0,495	0/0:21,0:15:2.77:0,3,49	1/1:14,13:18:5.59:72,6,0	0/0:39,1:28:53.75:0,54,839	0/0:25,0:18:32.47:0,32,487	0/0:20,1:8:2.96:0,3,19	1/1:15,18:29:0.39:1,0,0	0/1:79,7:48:0.13:0,0,0	0/0:27,0:23:39.13:0,39,619	0/0:23,0:22:30.10:0,30,479	0/0:57,0:47:60.20:0,60,969	0/0:19,1:19:15.04:0,15,243	0/0:26,0:22:42.07:0,42,615	1/1:5,4:8:11.70:117,12,0	1/1:7,1:6:5.67:48,6,0
chr10	42585425	.	TGC	T	275.76	PASS	AB=0.986;AC=12;AF=0.214;AN=56;BaseQRankSum=5.033;DP=724;FS=0.651;HRun=0;HaplotypeScore=169.3353;InbreedingCoeff=0.3281;MQ=39.95;MQ0=47;MQRankSum=-7.695;QD=1.56;ReadPosRankSum=-3.416;VQSLOD=1.9609;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:28:21.51:0,22,258	0/1:14,1:14:0.41:41,0,0	0/1:16,0:5:5.46:6,0,5	0/0:17,0:2:2.90:0,3,16	0/0:19,0:19:21.07:0,21,377	0/0:21,0:20:24.78:0,25,428	0/0:52,0:36:44.97:0,45,639	0/1:23,0:18:52.52:148,0,53	0/0:26,1:22:14.47:0,14,304	0/0:41,0:35:72.40:0,72,1373	0/0:13,0:11:18.06:0,18,321	0/0:48,2:47:42.45:0,42,998	0/0:25,0:24:10.55:0,11,462	0/0:36,1:33:22.98:0,23,633	0/0:16,0:14:2.77:0,3,57	0/1:24,0:17:6.20:28,0,6	0/0:34,0:25:56.65:0,57,944	0/0:21,0:17:19.56:0,20,492	0/1:18,0:7:22.05:22,0,66	1/1:26,0:25:0.39:1,0,0	0/1:43,1:30:0.26:0,0,0	0/0:24,0:24:38.93:0,39,627	0/0:22,0:21:24.09:0,24,581	0/0:54,0:48:68.94:0,69,1156	0/0:20,0:20:4.83:0,5,275	0/0:23,0:21:45.97:0,46,686	1/1:8,0:8:0.57:103,1,0	1/1:2,0:2:6:55,6,0
chr10	42585445	.	A	AGT	10051.60	PASS	AB=0.786;AC=44;AF=0.786;AN=56;BaseQRankSum=-4.685;DP=756;FS=0.855;HRun=0;HaplotypeScore=161.7552;InbreedingCoeff=0.3325;MQ=41.21;MQ0=32;MQRankSum=2.976;QD=15.83;ReadPosRankSum=0.485;VQSLOD=4.7195;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,19:33:27.09:442,27,0	1/1:6,3:9:6.50:134,7,0	0/0:44,0:11:25.12:0,25,248	0/0:51,0:8:8.32:0,8,107	1/1:11,7:18:6.02:100,6,0	1/1:14,8:21:21.07:348,21,0	1/1:31,18:39:45.62:727,46,0	0/1:15,8:20:38.86:335,0,39	1/1:13,12:23:12.04:201,12,0	1/1:19,14:28:52.06:797,52,0	1/1:9,6:13:12.04:201,12,0	1/1:24,25:45:39.12:588,39,0	1/1:11,16:26:52.03:803,52,0	1/1:12,17:28:9.96:682,10,0	1/1:13,5:17:15.05:245,15,0	1/1:12,13:21:12.90:172,13,0	1/1:16,12:23:37.68:604,38,0	1/1:13,8:18:33.74:485,34,0	0/1:16,3:11:4.09:255,0,4	0/0:17,7:24:0.89:0,1,2	0/1:41,9:41:0:0,0,0	1/1:8,15:21:22.32:354,22,0	1/1:2,17:18:33.11:552,33,0	1/1:13,32:42:75.24:1213,75,0	1/1:10,13:22:23.75:361,24,0	0/1:13,7:18:42.63:388,0,43	0/1:5,1:6:14.64:39,0,15	0/1:1,1:2:5.67:29,0,6
chr10	42585454	.	GTGGCT	G	643.77	PASS	AB=0.888;AC=10;AF=0.179;AN=56;BaseQRankSum=2.940;DP=771;FS=14.288;HRun=0;HaplotypeScore=213.1577;InbreedingCoeff=0.2373;MQ=42.97;MQ0=36;MQRankSum=-6.743;QD=3.95;ReadPosRankSum=-3.049;VQSLOD=0.9420;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:34:29.80:0,30,638	0/1:7,4:11:52.93:57,0,53	0/0:62,0:11:29.83:0,30,616	0/0:63,0:10:26.64:0,27,441	0/0:16,0:15:12.02:0,12,211	0/0:22,0:20:26.18:0,26,427	0/0:51,1:42:48.64:0,49,1033	0/1:17,4:20:99:248,0,594	0/0:27,0:25:32.81:0,33,461	0/0:30,0:26:2.82:0,3,853	0/0:13,0:12:15.03:0,15,204	0/1:44,0:39:36.89:37,0,730	0/0:28,0:26:32.31:0,32,1019	0/0:33,0:32:56.58:0,57,1160	0/0:18,0:17:24.95:0,25,529	0/0:26,0:23:17.42:0,17,309	0/0:25,0:22:11.85:0,12,705	0/1:16,0:15:15.73:16,0,475	0/1:10,1:8:39.13:39,0,170	0/0:13,8:21:0.47:0,0,26	0/1:45,4:43:0.13:0,0,2	0/0:21,0:19:23.91:0,24,424	0/0:23,0:23:39.13:0,39,814	0/0:43,0:40:58.24:0,58,1745	0/0:26,0:25:29.67:0,30,556	0/0:21,0:19:40.94:0,41,866	1/1:2,4:6:16.25:251,16,0	1/1:1,1:2:6.02:137,6,0
chr10	42585455	.	TGGCTA	T	488.23	PASS	AB=0.982;AC=12;AF=0.214;AN=56;BaseQRankSum=1.606;DP=761;FS=4.256;HRun=0;HaplotypeScore=212.0433;InbreedingCoeff=0.1404;MQ=43.03;MQ0=35;MQRankSum=-4.720;QD=2.31;ReadPosRankSum=-4.218;VQSLOD=1.2314;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:34:24.41:0,24,573	0/1:10,0:11:53.75:54,0,64	0/0:61,0:11:30.01:0,30,599	0/0:62,2:10:23.70:0,24,409	0/0:17,0:16:12.04:0,12,205	0/1:21,0:19:1:1,0,248	0/0:52,1:42:26.14:0,26,659	0/1:20,0:20:99:143,0,447	0/0:24,2:24:31.50:0,31,316	0/1:30,0:26:26.42:26,0,566	0/0:11,0:10:9.16:0,9,80	0/1:44,1:40:82.05:82,0,738	0/0:27,0:25:3.25:0,3,689	0/0:32,1:32:44.84:0,45,989	0/0:17,0:16:24.95:0,25,450	0/0:24,1:23:17.18:0,17,240	0/0:22,0:19:5.83:0,6,422	0/1:16,0:14:55.02:55,0,293	0/1:11,0:8:21.90:22,0,127	0/0:21,1:22:5.73:0,6,35	0/1:48,2:43:0.27:0,0,2	0/0:19,1:18:11.19:0,11,265	0/0:24,0:24:42.04:0,42,737	0/0:39,3:40:39.33:0,39,1402	0/0:26,0:25:26.18:0,26,479	0/0:22,0:19:33.08:0,33,689	1/1:5,0:5:11.97:149,12,0	1/1:2,0:2:6.02:101,6,0
chr10	42585456	.	GGCT	G	215.22	PASS	AB=0.929;AC=11;AF=0.196;AN=56;BaseQRankSum=4.603;DP=739;FS=19.403;HRun=0;HaplotypeScore=198.2937;InbreedingCoeff=0.2136;MQ=43.34;MQ0=34;MQRankSum=-5.055;QD=1.20;ReadPosRankSum=-2.101;VQSLOD=1.0927;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,1:34:29.74:0,30,501	0/1:11,0:11:21.05:21,0,101	0/0:64,0:11:29.54:0,30,511	0/0:65,0:10:23.70:0,24,371	0/0:14,0:14:15.05:0,15,237	0/0:18,1:17:25.95:0,26,345	0/0:40,9:40:51.71:0,52,953	0/1:20,0:20:86.05:86,0,595	0/0:25,1:24:32.82:0,33,434	0/0:23,3:23:9.36:0,9,683	0/0:9,1:9:12.02:0,12,153	0/1:42,2:40:22.73:23,0,682	0/0:24,3:25:46.44:0,46,770	0/0:31,1:31:53.56:0,54,924	0/0:14,1:15:24.95:0,25,430	0/0:20,3:22:15.98:0,16,280	0/1:18,2:19:1.49:1,0,545	0/1:13,2:14:36.13:36,0,369	0/1:11,0:8:24.68:25,0,152	0/0:22,0:22:1.98:0,2,29	0/1:34,10:44:0.30:0,0,1	0/0:18,0:17:20.93:0,21,292	0/0:21,0:23:42.14:0,42,747	0/0:40,1:39:58.23:0,58,1272	0/0:24,1:24:29.96:0,30,503	0/0:17,1:15:41.49:0,41,719	1/1:5,0:5:9.49:96,9,0	1/1:2,0:2:6.02:67,6,0
chr10	42585460	.	AGT	A	1599.78	PASS	AB=0.832;AC=23;AF=0.426;AN=54;BaseQRankSum=-1.504;DP=773;FS=15.286;HRun=0;HaplotypeScore=190.3000;InbreedingCoeff=0.3351;MQ=42.96;MQ0=31;MQRankSum=-2.105;QD=4.29;ReadPosRankSum=-1.571;VQSLOD=1.9310;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:34:24.06:0,24,360	1/1:6,0:13:6.18:23,6,0	0/0:67,0:11:5.21:0,5,31	0/0:75,0:11:7.61:0,8,39	0/0:14,0:13:13.13:0,13,122	1/1:12,4:15:15.04:174,15,0	1/1:26,20:40:24.20:428,24,0	0/1:18,0:24:36.10:36,0,79	1/1:14,12:24:28.71:291,29,0	0/1:22,4:22:29.49:115,0,29	1/1:6,1:7:3.01:36,3,0	0/0:50,0:45:20.81:0,21,255	0/0:27,0:25:9.14:0,9,245	0/0:31,0:31:42.73:0,43,473	0/0:19,0:19:1.93:0,2,5	1/1:11,11:23:17.41:213,17,0	1/1:11,12:22:17.92:297,18,0	0/1:11,4:15:16.61:84,0,17	0/0:12,0:8:2.94:0,3,18	0/1:10,0:22:0:0,0,0	0/1:38,0:48:0.44:0,0,8	0/0:21,1:20:21.06:0,21,250	0/1:21,1:24:9.10:9,0,250	0/0:43,0:41:54.10:0,54,615	0/1:20,2:21:22.71:23,0,25	0/1:19,1:18:41.86:42,0,103	0/1:4,0:5:0:0,0,0	./.
chr10	42585478	.	T	TGC	802.93	PASS	AB=1.000;AC=14;AF=0.259;AN=54;BaseQRankSum=1.302;DP=869;FS=9.669;HRun=0;HaplotypeScore=177.2436;InbreedingCoeff=-0.0094;MQ=39.82;MQ0=42;MQRankSum=4.050;QD=2.52;ReadPosRankSum=-0.658;VQSLOD=1.9971;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:41:30.73:0,31,511	0/0:11,0:11:14.82:0,15,104	0/0:98,0:14:35.91:0,36,315	0/0:100,0:14:29.07:0,29,236	0/0:13,0:12:13.44:0,13,69	0/0:16,0:14:10.14:0,10,130	0/0:56,0:43:16.98:0,17,283	0/0:26,0:25:62.58:0,63,555	0/1:29,0:24:6.84:7,0,166	0/0:29,0:26:2.55:0,3,138	0/1:6,0:6:5.47:5,0,12	0/1:47,0:40:11.55:12,0,96	1/1:11,22:30:9.09:626,9,0	0/1:32,0:31:65.91:66,0,109	1/1:27,0:26:9.90:27,10,0	0/0:25,0:23:14.98:0,15,174	0/0:29,0:27:0.16:0,0,224	0/1:20,0:19:33.40:33,0,41	0/0:11,0:6:14.45:0,14,105	0/0:17,0:17:11.96:0,12,97	0/0:69,0:65:26.62:0,27,201	0/1:26,0:24:53.43:57,0,53	0/1:20,0:20:10.32:10,0,97	0/1:36,0:34:55.92:56,0,157	0/1:18,0:18:4.05:4,0,14	0/1:23,0:20:49.10:49,0,108	0/0:5,0:5:6.80:0,7,40	./.
chr10	42585480	.	TGC	T	1133.73	PASS	AB=0.995;AC=17;AF=0.315;AN=54;BaseQRankSum=3.328;DP=871;FS=6.342;HRun=0;HaplotypeScore=175.6448;InbreedingCoeff=-0.2865;MQ=40.39;MQ0=43;MQRankSum=-3.979;QD=2.21;ReadPosRankSum=-2.117;VQSLOD=1.8938;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:40:37.73:0,38,606	0/0:11,0:11:8.24:0,8,37	0/1:101,0:14:26.67:27,0,137	0/1:96,0:14:55.48:55,0,71	0/1:12,0:11:44.45:44,0,83	0/1:16,0:14:44.96:63,0,45	0/1:54,1:43:99:127,0,110	0/0:27,0:26:46.18:0,46,452	0/1:27,0:23:55.37:81,0,55	0/1:31,0:28:11.70:268,0,12	1/1:6,0:6:8.86:63,9,0	0/0:47,0:40:13.89:0,14,411	0/0:32,0:29:3.31:0,3,428	0/0:31,0:30:53.46:0,53,799	0/1:27,0:26:17.53:18,0,43	0/1:24,0:22:70.37:74,0,70	0/1:29,0:27:94.64:105,0,95	0/1:17,1:18:53.46:128,0,53	0/0:12,0:7:14.80:0,15,110	0/0:18,0:18:9.84:0,10,72	0/0:72,1:68:35.41:0,35,266	0/0:26,1:25:25.14:0,25,377	0/1:20,0:20:0.39:0,0,356	0/0:37,0:35:66.31:0,66,987	0/1:19,0:19:38:38,0,54	0/1:25,0:22:80.30:188,0,80	0/1:5,0:5:8.78:9,0,11	./.
chr10	42585482	.	C	CGT	1643.91	PASS	AB=1.000;AC=15;AF=0.278;AN=54;BaseQRankSum=1.774;DP=876;FS=13.541;HRun=0;HaplotypeScore=185.3662;InbreedingCoeff=0.7058;MQ=40.97;MQ0=40;MQRankSum=1.183;QD=8.39;ReadPosRankSum=1.138;VQSLOD=2.5021;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:41:51.85:0,52,601	0/0:11,0:11:15.02:0,15,153	0/0:99,0:12:27.84:0,28,294	0/0:94,0:15:15.69:0,16,165	1/1:7,4:10:22.37:277,22,0	0/0:16,0:14:21.05:0,21,242	0/0:56,0:45:56.31:0,56,664	0/0:29,0:29:37.32:0,37,702	0/0:27,0:24:29.87:0,30,359	1/1:28,1:28:17.42:389,17,0	1/1:6,0:6:6.01:73,6,0	0/0:44,0:37:31.43:0,31,367	0/1:30,0:28:17.73:93,0,18	0/0:29,0:28:51.10:0,51,589	1/1:28,0:27:28.43:211,28,0	0/0:24,0:22:26.75:0,27,324	0/0:30,0:28:37.26:0,37,511	0/1:17,0:17:9.79:151,0,10	0/0:15,0:10:22.60:0,23,237	0/0:18,0:18:15.01:0,15,163	0/0:77,0:72:35.61:0,36,405	0/1:28,0:27:4.58:5,0,252	0/0:19,0:19:30.07:0,30,339	0/0:36,0:36:31.24:0,31,695	1/1:20,0:20:19.01:143,19,0	1/1:25,0:23:39.74:486,40,0	0/0:5,0:5:6:0,6,58	./.
chr10	42589241	.	G	GA	3768.24	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-4.030;DP=597;FS=0.838;HRun=7;HaplotypeScore=68.7560;InbreedingCoeff=0.9852;MQ=73.71;MQ0=0;MQRankSum=0.680;QD=31.67;ReadPosRankSum=0.979;VQSLOD=3.6168;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:42.06:0,42,406	0/0:6,0:6:15.02:0,15,145	0/0:10,0:10:9.29:0,9,198	0/0:13,0:13:26.06:0,26,204	0/0:23,0:23:54.08:0,54,521	0/0:20,0:20:45.07:0,45,435	0/0:18,0:18:51.07:0,51,487	0/0:36,0:36:90.12:0,90,864	0/0:18,0:18:48.06:0,48,458	0/0:22,0:22:60.09:0,60,576	0/0:33,0:33:87.12:0,87,834	1/1:0,12:13:33.10:398,33,0	1/1:2,24:26:75.23:906,75,0	1/1:2,19:21:57.17:689,57,0	0/0:29,0:29:75.10:0,75,719	0/0:20,0:20:54.08:0,54,522	0/0:25,0:25:69.11:0,69,665	0/0:20,0:20:60.08:0,60,573	0/0:21,0:21:57.09:0,57,550	0/0:30,0:30:87.13:0,87,835	0/0:12,0:12:30.04:0,30,289	1/1:1,16:17:48.15:580,48,0	1/1:5,26:31:69.21:834,69,0	1/1:0,11:11:30.09:362,30,0	0/0:30,0:30:78.09:0,78,746	0/0:26,0:26:72.09:0,72,685	0/0:36,0:36:99:0,108,1036	0/0:13,0:13:39.06:0,39,377
chr10	42590003	.	AC	A	4205.84	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-7.239;DP=552;FS=4.600;HRun=9;HaplotypeScore=93.7884;InbreedingCoeff=0.9579;MQ=82.87;MQ0=1;MQRankSum=-2.283;QD=18.37;ReadPosRankSum=6.062;VQSLOD=3.5685;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,0:35:59.07:174,59,0	0/0:1,0:6:8.64:0,9,47	0/0:36,1:28:36.85:0,37,358	0/0:27,0:20:4.59:0,5,188	0/0:11,0:11:13.89:0,14,152	1/1:1,17:18:45.02:412,45,0	1/1:6,20:26:57.03:520,57,0	0/0:14,0:23:37.51:0,38,230	1/1:1,20:21:54.03:494,54,0	0/0:14,0:14:32.31:0,32,320	0/0:15,0:15:27.51:0,28,286	1/1:3,23:26:60.03:547,60,0	1/1:3,21:24:54.03:494,54,0	1/1:0,17:17:36.02:329,36,0	0/0:21,0:21:46.29:0,46,508	0/0:2,0:14:19.44:0,19,105	0/0:30,0:30:62.33:0,62,622	0/0:14,0:14:33.07:0,33,357	0/0:9,0:17:32.24:0,32,248	0/0:5,0:13:26.10:0,26,179	0/0:3,0:17:25.86:0,26,147	1/1:4,17:21:54.01:494,54,0	1/1:3,7:10:15:138,15,0	1/1:6,25:31:66.03:604,66,0	0/0:15,0:14:36.10:0,36,410	0/0:20,0:20:44.33:0,44,447	0/0:1,0:13:19.92:0,20,101	0/0:7,0:13:11.36:0,11,58
chr10	42591213	.	ATGAG	A	3089.10	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=0.090;DP=676;FS=15.695;HRun=0;HaplotypeScore=139.1871;InbreedingCoeff=0.9992;MQ=83.83;MQ0=0;MQRankSum=-3.523;QD=42.90;ReadPosRankSum=1.078;VQSLOD=3.5543;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,111,2777	0/0:9,0:9:27.08:0,27,682	0/0:21,0:21:45.19:0,45,1416	0/0:20,0:20:27.94:0,28,1059	0/0:33,0:33:93.32:0,93,2496	1/1:0,17:17:42.14:794,42,0	1/1:1,24:25:51.17:985,51,0	0/0:26,0:26:69.22:0,69,1722	1/1:1,29:30:75.26:1453,75,0	0/0:31,0:31:90.31:0,90,2407	0/0:38,0:37:99:0,114,3121	0/0:28,0:28:84.27:0,84,2187	0/0:25,0:25:75.26:0,75,2054	0/0:21,0:21:60.21:0,60,1626	0/0:20,0:20:60.21:0,60,1643	0/0:24,0:24:69.22:0,69,1779	0/0:27,0:27:81.28:0,81,2177	0/0:28,0:28:81.24:0,81,2101	0/0:13,0:13:36.12:0,36,983	0/0:26,0:26:75.26:0,75,2029	0/0:14,0:14:42.14:0,42,1111	0/0:22,0:22:66.20:0,66,1748	0/0:24,0:24:69.24:0,69,1857	0/0:17,0:17:51.18:0,51,1383	0/0:15,0:15:45.15:0,45,1233	0/0:31,0:31:93.32:0,93,2537	0/0:36,0:35:99:0,108,2885	0/0:15,0:15:45.15:0,45,1232
chr10	42591263	.	AT	A	4929.15	PASS	AB=0.909;AC=17;AF=0.304;AN=56;BaseQRankSum=-6.578;DP=642;FS=13.459;HRun=8;HaplotypeScore=103.2461;InbreedingCoeff=0.8841;MQ=62.87;MQ0=0;MQRankSum=-1.585;QD=22.61;ReadPosRankSum=2.142;VQSLOD=3.9277;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,35:38:93.14:898,93,0	0/0:12,0:12:33.10:0,33,398	0/0:11,0:11:9.54:0,10,196	0/0:4,0:4:7.26:0,7,75	0/0:23,0:23:54.16:0,54,642	0/0:22,0:22:60.18:0,60,725	0/0:22,0:22:57.16:0,57,677	0/0:16,0:16:48.14:0,48,570	0/0:32,0:32:81.24:0,81,966	0/0:32,0:32:90.23:0,90,1070	0/0:27,0:26:69.20:0,69,824	1/1:2,14:16:36.05:348,36,0	1/1:3,18:21:54.08:522,54,0	1/1:1,24:25:66.10:637,66,0	0/0:25,0:25:72.22:0,72,870	0/0:24,0:24:63.19:0,63,759	1/1:1,25:26:75.12:724,75,0	0/1:18,2:20:33.14:33,0,390	0/0:22,2:24:8.25:0,8,667	0/0:28,0:28:72.22:0,72,863	0/0:21,0:21:63.19:0,63,761	1/1:1,24:25:66.11:637,66,0	1/1:5,25:30:72.11:695,72,0	1/1:2,15:17:45.07:435,45,0	0/0:12,0:12:30.09:0,30,362	0/0:28,0:28:75.20:0,75,873	0/0:42,0:41:99:0,120,1447	0/0:19,0:19:54.17:0,54,652
chr10	42592795	.	G	GAAAAA	8792.69	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-1.291;DP=682;FS=7.192;HRun=9;HaplotypeScore=162.9730;InbreedingCoeff=0.8504;MQ=73.94;MQ0=4;MQRankSum=-2.016;QD=14.32;ReadPosRankSum=4.104;VQSLOD=1.2121;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:40,0:40:82.63:401,83,0	1/1:3,4:8:12.04:307,12,0	0/0:34,0:26:26.34:0,26,344	0/0:31,0:25:20.17:0,20,348	1/1:1,0:18:46.23:208,46,0	1/1:23,0:23:41.30:199,41,0	1/1:24,0:24:39.99:173,40,0	1/1:3,23:34:89.98:1535,90,0	1/1:20,0:20:33.70:178,34,0	1/1:9,0:20:47.38:291,47,0	1/1:5,0:15:32.79:167,33,0	1/1:30,0:30:55.27:273,55,0	1/1:25,0:25:49.54:235,50,0	1/1:43,0:43:65.40:302,65,0	1/1:6,0:24:22.09:205,22,0	1/1:5,10:18:24.04:565,24,0	1/1:2,0:24:39.42:224,39,0	1/1:3,0:26:53.57:223,54,0	1/1:23,1:25:48.05:658,48,0	1/1:3,8:16:18.03:344,18,0	1/1:4,4:11:3.01:85,3,0	1/1:27,0:27:47.15:253,47,0	1/1:24,0:24:38.73:187,39,0	1/1:35,0:35:68.08:316,68,0	1/1:5,0:17:28.71:185,29,0	1/1:4,0:29:59.28:322,59,0	1/1:6,16:29:32.75:789,33,0	1/1:3,3:6:6.02:170,6,0
chr10	42592800	.	A	AAAG	12895.77	PASS	AB=1.000;AC=39;AF=0.696;AN=56;BaseQRankSum=-2.926;DP=672;FS=13.080;HRun=0;HaplotypeScore=119.2968;InbreedingCoeff=0.1395;MQ=72.59;MQ0=4;MQRankSum=-3.526;QD=22.47;ReadPosRankSum=12.962;VQSLOD=2.2081;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,40:41:90.20:1866,90,0	0/1:7,0:7:13.06:33,0,13	0/0:39,0:27:48.12:0,48,656	0/0:37,0:28:43.09:0,43,613	1/1:18,0:18:18.55:55,19,0	1/1:1,20:21:45.15:960,45,0	1/1:0,22:22:45.15:961,45,0	0/1:37,0:37:99:116,0,245	1/1:1,18:19:36.12:760,36,0	1/1:19,0:19:23.01:108,23,0	1/1:14,0:13:16.11:46,16,0	1/1:2,28:31:60.20:1273,60,0	1/1:1,21:23:54.18:1150,54,0	1/1:4,39:43:72.22:1511,72,0	0/1:25,0:25:60.42:60,0,101	1/1:17,0:17:9.94:84,10,0	0/1:27,0:27:47.23:69,0,47	0/1:26,0:26:10.31:50,0,10	0/0:22,0:21:2.05:0,2,253	0/1:13,0:13:3.92:43,0,4	0/1:10,0:10:1.59:2,0,42	1/1:1,24:25:57.01:1031,57,0	1/1:2,19:22:42.61:896,43,0	1/1:0,33:33:75.26:1601,75,0	0/1:17,0:17:0.81:56,0,1	0/1:28,0:28:41.72:42,0,52	0/1:30,0:29:12.83:117,0,13	0/1:6,0:6:6.17:6,0,62
chr10	42593271	.	GACTGACGA	G	6299.19	PASS	AB=0.548;AC=15;AF=0.268;AN=56;BaseQRankSum=11.347;DP=583;FS=24.061;HRun=0;HaplotypeScore=159.4017;InbreedingCoeff=0.8939;MQ=86.85;MQ0=0;MQRankSum=-11.221;QD=53.38;ReadPosRankSum=-1.205;VQSLOD=3.0226;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,147,6197	1/1:0,7:7:18.06:516,18,0	0/0:24,0:24:69.01:0,69,2434	0/0:31,0:31:77.71:0,78,2751	0/0:11,0:11:27.09:0,27,791	0/0:16,0:16:48.16:0,48,2041	0/0:31,0:31:93.26:0,93,3843	1/1:4,19:23:57.17:1407,57,0	0/0:23,0:23:69.24:0,69,3074	0/0:13,0:13:33.11:0,33,1288	0/0:12,0:12:30.09:0,30,1060	0/0:29,0:29:84.29:0,84,3474	0/0:26,0:26:75.24:0,75,3077	0/0:14,0:14:39.13:0,39,1607	0/0:25,0:24:69.22:0,69,2910	0/1:3,14:17:91.99:1016,0,92	0/0:48,0:48:99:0,141,6134	0/0:21,0:21:63.22:0,63,2732	1/1:3,10:13:30.09:742,30,0	1/1:1,12:13:27.09:726,27,0	1/1:2,20:22:21.50:489,21,0	0/0:10,0:10:27.08:0,27,953	0/0:6,0:6:18.05:0,18,661	0/0:46,0:45:99:0,138,6034	0/0:9,0:9:27.09:0,27,1017	0/0:18,0:18:51.17:0,51,1949	1/1:3,16:19:42.14:1145,42,0	1/1:1,3:4:9.03:258,9,0
chr10	42594059	.	T	TA	18463.14	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-2.635;DP=626;FS=19.166;HRun=6;HaplotypeScore=79.5418;InbreedingCoeff=0.9963;MQ=77.73;MQ0=0;MQRankSum=-7.587;QD=30.93;ReadPosRankSum=4.512;VQSLOD=3.2274;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,23:25:63.20:793,63,0	1/1:3,10:13:27.09:340,27,0	0/0:18,0:18:38.40:0,38,359	0/0:11,0:11:20.72:0,21,170	1/1:1,30:31:84.27:1057,84,0	1/1:2,20:22:57.18:717,57,0	1/1:4,16:20:45.14:566,45,0	1/1:6,27:33:81.23:991,81,0	1/1:4,21:25:60.15:737,60,0	1/1:3,31:35:93.27:1137,93,0	1/1:1,19:20:57.18:717,57,0	1/1:2,21:23:60.19:753,60,0	1/1:3,18:21:48.15:603,48,0	1/1:4,10:14:27.09:340,27,0	1/1:0,23:23:63.14:793,63,0	1/1:1,17:18:51.16:642,51,0	1/1:4,20:24:48.15:604,48,0	1/1:2,19:21:51.16:642,51,0	1/1:4,20:24:60.18:734,60,0	1/1:3,21:24:63.20:793,63,0	1/1:2,27:29:75.24:944,75,0	1/1:2,14:16:38.95:449,39,0	1/1:0,26:26:63.20:793,63,0	1/1:2,12:14:33.11:415,33,0	1/1:1,27:28:75.24:944,75,0	1/1:4,23:27:63.20:793,63,0	1/1:3,27:30:60.19:755,60,0	1/1:0,11:11:33.11:415,33,0
chr10	42594762	.	T	TC	6736.48	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-15.262;DP=567;FS=0.000;HRun=3;HaplotypeScore=59.8041;InbreedingCoeff=0.9902;MQ=86.01;MQ0=0;MQRankSum=-1.843;QD=39.39;ReadPosRankSum=4.242;VQSLOD=4.7802;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:69.11:0,69,782	0/0:14,0:14:42.12:0,42,495	0/0:15,0:15:42.12:0,42,491	0/0:21,0:21:47.93:0,48,545	1/1:0,27:27:81.27:1132,81,0	0/0:16,0:16:48.14:0,48,566	0/0:21,0:21:60.15:0,60,686	0/0:32,0:32:87.24:0,87,1013	0/0:10,0:10:30.09:0,30,360	1/1:1,26:28:75.25:1045,75,0	1/1:0,24:24:72.24:1008,72,0	0/0:18,0:18:51.16:0,51,612	0/0:23,0:23:66.20:0,66,792	0/0:25,0:25:75.22:0,75,889	1/1:2,18:20:51.17:714,51,0	0/0:18,0:18:54.17:0,54,648	1/1:0,15:15:36.12:504,36,0	1/1:0,12:12:36.12:504,36,0	0/0:19,0:19:54.13:0,54,625	0/0:32,0:32:90.28:0,90,1080	0/0:21,0:21:60.17:0,60,707	0/0:16,0:16:45.14:0,45,540	0/0:20,0:20:57.16:0,57,672	0/0:19,0:19:57.16:0,57,671	1/1:0,19:19:57.19:798,57,0	1/1:1,25:26:75.23:1031,75,0	0/0:28,0:28:81.25:0,81,972	0/0:3,0:3:9.03:0,9,107
chr10	42595184	.	AGAGAAAGAG	A	21003.95	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=0.837;DP=672;FS=4.962;HRun=0;HaplotypeScore=233.5292;InbreedingCoeff=0.8996;MQ=66.61;MQ0=11;MQRankSum=-5.453;QD=40.47;ReadPosRankSum=7.215;VQSLOD=3.6020;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,20:29:18.06:476,18,0	1/1:5,0:5:11.94:244,12,0	0/0:63,0:34:48.92:0,49,814	0/0:88,0:49:69.13:0,69,1375	1/1:23,0:23:62.91:1050,63,0	1/1:6,13:19:27.09:702,27,0	1/1:2,12:14:18.06:480,18,0	1/1:19,0:19:24.06:397,24,0	1/1:4,18:22:29.77:837,30,0	1/1:21,0:21:54.14:1392,54,0	1/1:17,0:17:39.12:804,39,0	1/1:9,20:29:30.10:852,30,0	1/1:5,24:29:45.05:1261,45,0	1/1:2,18:20:42.14:1193,42,0	1/1:32,0:31:63.19:1606,63,0	1/1:17,0:17:33.11:863,33,0	1/1:16,0:16:16.98:437,17,0	1/1:14,0:14:26.92:424,27,0	1/1:11,0:11:21.03:474,21,0	1/1:25,0:25:50.72:1028,51,0	1/1:12,0:12:20.95:303,21,0	1/1:4,19:23:50.95:1135,51,0	1/1:6,21:27:39.08:974,39,0	1/1:13,15:28:7.23:320,7,0	1/1:18,0:18:41.99:1091,42,0	1/1:23,0:22:51.12:1275,51,0	1/1:23,0:23:48.05:1128,48,0	1/1:3,0:3:9.03:256,9,0
chr10	42595202	.	GGAGAAAGA	G	11761.88	PASS	AB=0.887;AC=35;AF=0.625;AN=56;BaseQRankSum=10.516;DP=674;FS=3.200;HRun=0;HaplotypeScore=250.3177;InbreedingCoeff=-0.2701;MQ=69.24;MQ0=14;MQRankSum=-8.017;QD=24.40;ReadPosRankSum=13.482;VQSLOD=2.1892;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:25:99:195,0,137	1/1:5,2:7:15.13:179,15,0	0/0:70,0:42:97.32:0,97,1580	0/0:117,0:62:99:0,119,2393	0/1:8,15:23:0.98:528,0,1	1/1:13,0:13:26.35:325,26,0	0/1:13,0:13:21.11:208,0,21	0/1:19,0:19:8.28:284,0,8	0/1:21,0:21:60.49:381,0,60	1/1:12,14:26:13.30:981,13,0	1/1:5,10:15:5.78:461,6,0	0/1:21,0:21:8.85:401,0,9	0/1:28,0:28:99:577,0,110	0/1:20,0:20:35.76:559,0,36	1/1:7,18:24:30.67:1099,31,0	0/1:8,5:13:24.78:584,0,25	0/1:13,6:19:99:235,0,124	0/1:13,3:16:92.31:194,0,92	1/1:5,5:10:3.64:322,4,0	0/1:14,11:25:9.92:618,0,10	0/1:6,2:8:2.74:133,0,3	0/1:20,0:20:61.20:443,0,61	0/1:23,0:23:40.60:387,0,41	0/1:26,0:27:99:120,0,258	0/1:10,11:21:5.70:739,0,6	1/1:10,13:22:7.31:883,7,0	1/1:7,11:18:25.06:731,25,0	1/1:0,3:3:9.03:193,9,0
chr10	42595308	.	G	GA	11341.54	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=-2.086;DP=678;FS=5.821;HRun=3;HaplotypeScore=104.3419;InbreedingCoeff=0.9714;MQ=74.60;MQ0=5;MQRankSum=-0.663;QD=35.44;ReadPosRankSum=2.242;VQSLOD=4.8514;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:86.63:0,87,1015	1/1:0,10:10:27.09:378,27,0	0/0:58,0:36:49.23:0,49,695	0/0:75,0:48:58.82:0,59,976	1/1:1,17:18:42.10:563,42,0	0/0:24,0:24:66.20:0,66,791	0/0:17,0:17:41.16:0,41,474	1/1:2,26:28:71.91:919,72,0	0/0:13,0:13:36.07:0,36,406	1/1:5,27:33:81.27:1131,81,0	1/1:4,16:20:45.15:630,45,0	0/0:27,0:27:69.21:0,69,827	0/0:14,0:14:39.12:0,39,468	0/0:24,0:24:66.20:0,66,791	1/1:2,22:24:60.20:840,60,0	1/1:1,16:17:45.15:630,45,0	1/1:2,19:21:51.17:714,51,0	1/1:0,12:13:32.44:497,32,0	1/1:2,11:13:1.96:424,2,0	1/1:2,26:28:75.25:1050,75,0	1/1:1,15:16:30.43:492,30,0	0/0:21,0:21:54.16:0,54,648	0/0:30,0:30:80.95:0,81,971	0/0:23,0:23:57.17:0,57,683	1/1:0,15:15:45.15:630,45,0	1/1:0,25:25:75.24:1028,75,0	1/1:0,20:20:51.64:713,52,0	1/1:1,18:19:45.41:703,45,0
chr10	42595386	.	G	GGA	3878.10	PASS	AB=0.976;AC=24;AF=0.429;AN=56;BaseQRankSum=4.204;DP=599;FS=10.550;HRun=0;HaplotypeScore=148.3394;InbreedingCoeff=0.5001;MQ=68.57;MQ0=25;MQRankSum=-3.257;QD=15.57;ReadPosRankSum=-1.996;VQSLOD=2.4082;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:21,0:21:14.38:84,0,14	0/1:5,1:6:24.73:83,0,25	0/0:69,0:31:44.06:0,44,540	0/0:93,0:42:3.71:0,4,288	1/1:17,3:20:22.88:297,23,0	0/0:17,0:17:38.85:0,39,462	0/0:20,0:20:36.06:0,36,443	1/1:15,0:15:39.12:580,39,0	0/0:14,0:15:24.45:0,24,339	0/0:25,0:23:65.82:0,66,673	0/0:8,0:8:10.27:0,10,108	0/0:14,0:14:5.15:0,5,48	1/1:19,0:19:9.02:40,9,0	0/1:17,0:16:5.65:45,0,6	0/0:19,0:19:33.09:0,33,404	1/1:20,0:20:49.59:556,50,0	0/0:13,0:12:19.08:0,19,250	0/0:10,0:9:0.25:0,0,182	1/1:9,4:13:26.99:384,27,0	1/1:10,2:12:30.04:401,30,0	1/1:9,6:14:27.09:407,27,0	0/1:26,0:26:35.56:55,0,36	0/1:18,0:18:16.91:17,0,19	0/1:14,0:14:15.19:33,0,15	0/0:24,0:24:41.87:0,42,531	0/0:23,0:22:61.72:0,62,738	1/1:19,3:24:30.18:503,30,0	1/1:5,4:9:24.08:393,24,0
chr10	42595395	.	G	GA	1174.60	PASS	AB=0.935;AC=18;AF=0.321;AN=56;BaseQRankSum=7.343;DP=608;FS=0.897;HRun=1;HaplotypeScore=142.1075;InbreedingCoeff=0.1389;MQ=64.38;MQ0=38;MQRankSum=-2.222;QD=4.91;ReadPosRankSum=-0.464;VQSLOD=-0.0162;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:24:7.99:8,0,398	0/1:7,2:8:27.07:117,0,27	0/0:58,0:24:50.23:0,50,622	0/0:79,0:30:19.98:0,20,413	0/1:20,0:20:58.50:82,0,59	0/0:21,0:21:41.80:0,42,513	0/0:19,0:19:37.31:0,37,476	0/1:24,0:24:99:130,0,178	0/0:15,0:15:27.12:0,27,352	0/0:29,0:26:70.86:0,71,848	0/0:8,0:8:10.75:0,11,130	0/1:15,1:15:30.97:31,0,58	0/1:20,0:18:4.88:5,0,328	0/1:17,2:15:49.05:49,0,165	0/0:19,2:21:43.56:0,44,448	1/1:14,5:19:38.90:344,39,0	0/1:9,4:12:55.98:56,0,260	0/0:9,1:9:2.32:0,2,239	0/1:11,1:11:36.20:36,0,70	1/1:12,2:12:12.65:145,13,0	1/1:15,0:14:22.53:114,23,0	0/0:26,0:27:2.26:0,2,92	0/0:17,0:17:8.72:0,9,58	0/0:13,0:12:12.79:0,13,71	0/0:23,1:24:45.57:0,46,561	0/0:26,0:23:66.14:0,66,859	0/1:24,0:24:37.65:163,0,38	1/1:9,0:8:19.92:72,20,0
chr10	42595397	.	G	GGGGAGA	4696.42	PASS	AB=0.863;AC=27;AF=0.482;AN=56;BaseQRankSum=4.997;DP=627;FS=0.821;HRun=0;HaplotypeScore=174.6633;InbreedingCoeff=0.4784;MQ=63.66;MQ0=39;MQRankSum=-3.006;QD=14.86;ReadPosRankSum=-2.299;VQSLOD=3.7292;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:25,2:26:60.13:734,60,0	0/1:10,0:9:4.14:132,0,4	0/0:59,0:24:29.13:0,29,373	0/0:79,0:27:10.85:0,11,251	0/1:19,0:21:58.67:175,0,59	0/0:12,0:21:41.01:0,41,441	0/0:13,0:19:31.82:0,32,316	0/1:27,0:27:27.64:369,0,28	0/0:10,0:15:26.11:0,26,237	0/0:26,0:27:68.94:0,69,684	0/0:8,0:8:9.07:0,9,72	0/1:4,1:18:3.90:4,0,9	1/1:20,0:18:47.41:445,47,0	1/1:18,0:15:33.95:563,34,0	0/0:15,0:21:40.28:0,40,440	1/1:18,0:18:39.92:336,40,0	0/1:14,0:13:43.89:44,0,116	0/0:9,0:8:19.35:0,19,165	0/1:17,0:16:4.31:237,0,4	1/1:15,0:13:31.31:327,31,0	1/1:16,0:15:32.47:295,32,0	0/1:7,0:28:28.71:94,0,29	1/1:3,0:17:2.73:53,3,0	1/1:5,0:12:4.75:58,5,0	0/0:15,0:23:35:0,35,421	0/0:25,0:24:59.74:0,60,605	1/1:24,0:24:2.15:543,2,0	1/1:10,0:9:23.99:288,24,0
chr10	42595594	.	TC	T	4898	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=11.151;DP=636;FS=0.706;HRun=6;HaplotypeScore=63.3073;InbreedingCoeff=0.9984;MQ=75.59;MQ0=0;MQRankSum=-0.665;QD=29.68;ReadPosRankSum=3.099;VQSLOD=5.5287;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,129,1662	0/0:10,0:10:27.09:0,27,354	0/0:21,0:21:54.16:0,54,691	0/0:18,0:18:41.90:0,42,499	1/1:1,19:20:57.14:612,57,0	0/0:15,0:15:42.14:0,42,552	0/0:27,0:27:75.23:0,75,970	0/0:36,0:36:99:0,99,1177	0/0:24,0:24:63.18:0,63,800	1/1:1,23:24:69.17:741,69,0	1/1:0,13:13:33.08:355,33,0	0/0:23,0:22:66.21:0,66,863	0/0:29,0:29:81.23:0,81,1031	0/0:22,0:22:60.19:0,60,776	1/1:1,30:31:78.20:838,78,0	0/0:31,0:31:87.28:0,87,1144	1/1:0,19:19:57.14:612,57,0	1/1:0,7:7:18.05:193,18,0	0/0:18,0:18:37.32:0,37,456	0/0:21,0:21:60.15:0,60,757	0/0:30,0:30:84.27:0,84,1095	0/0:18,0:18:48.13:0,48,613	0/0:23,0:23:57.19:0,57,750	0/0:19,0:19:57.18:0,57,747	1/1:2,24:26:72.18:774,72,0	1/1:1,24:25:72.18:774,72,0	0/0:22,0:22:57.17:0,57,735	0/0:18,0:18:51.16:0,51,655
chr10	42596073	.	GT	G	2534.11	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=6.828;DP=704;FS=2.741;HRun=3;HaplotypeScore=72.0987;InbreedingCoeff=1.0000;MQ=65.41;MQ0=0;MQRankSum=0.951;QD=32.49;ReadPosRankSum=2.879;VQSLOD=4.1993;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,126,1725	0/0:13,0:13:39.12:0,39,543	0/0:27,0:26:71.77:0,72,1014	0/0:17,0:17:51.03:0,51,681	0/0:22,0:22:66.21:0,66,932	1/1:0,24:24:69.22:855,69,0	1/1:1,25:26:72.23:892,72,0	0/0:31,0:31:84.27:0,84,1179	1/1:1,27:28:75.24:929,75,0	0/0:30,0:30:87.29:0,87,1243	0/0:28,0:28:81.23:0,81,1139	0/0:23,0:23:66.21:0,66,933	0/0:22,0:22:63.17:0,63,877	0/0:23,0:23:69.21:0,69,957	0/0:20,0:20:57.18:0,57,802	0/0:23,0:23:69.22:0,69,974	0/0:27,0:27:81.26:0,81,1132	0/0:13,0:14:41.97:0,42,574	0/0:20,0:20:60.20:0,60,864	0/0:49,0:49:99:0,141,1973	0/0:30,0:30:87.25:0,87,1197	0/0:27,0:27:81.26:0,81,1147	0/0:26,0:26:78.25:0,78,1105	0/0:25,0:25:69.22:0,69,976	0/0:23,0:22:69.21:0,69,957	0/0:30,0:30:90.25:0,90,1257	0/0:19,0:19:54.18:0,54,777	0/0:14,0:14:42.06:0,42,558
chr10	42596257	.	GACCAATCACT	G	8925.03	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=14.391;DP=521;FS=8.414;HRun=0;HaplotypeScore=163.6071;InbreedingCoeff=0.9667;MQ=78.96;MQ0=0;MQRankSum=-14.102;QD=69.19;ReadPosRankSum=-0.080;VQSLOD=4.1633;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:69.24:0,69,3585	0/0:5,0:5:15.05:0,15,780	0/0:18,0:18:50.74:0,51,2111	0/0:24,0:24:72.24:0,72,3157	1/1:3,18:21:44.60:1043,45,0	0/0:17,0:17:51.18:0,51,2594	0/0:23,0:23:66.23:0,66,3492	0/0:30,0:30:81.27:0,81,3754	0/0:15,0:15:45.15:0,45,2261	1/1:1,20:21:60.21:1894,60,0	1/1:2,13:15:30.10:857,30,0	0/0:18,0:18:54.19:0,54,2772	0/0:11,0:11:30.10:0,30,1585	0/0:16,0:16:48.16:0,48,2353	1/1:2,14:16:39.13:1173,39,0	0/0:21,0:21:60.21:0,60,3133	1/1:2,9:11:21.07:692,21,0	1/1:1,2:3:3.01:40,3,0	0/0:23,0:23:63.22:0,63,3208	0/0:24,0:24:72.23:0,72,3578	0/0:25,0:25:69.19:0,69,3330	0/0:24,0:24:72.25:0,72,3813	0/0:22,0:22:63.22:0,63,3261	0/0:32,0:32:93.31:0,93,4604	1/1:0,20:20:54.14:1397,54,0	1/1:3,19:22:57.20:1830,57,0	0/0:10,0:10:27.09:0,27,1412	0/0:10,0:10:30.10:0,30,1589
chr10	42596735	.	TCTCTC	T	5867.10	PASS	AB=0.932;AC=44;AF=0.815;AN=54;BaseQRankSum=-1.474;DP=594;FS=34.321;HRun=0;HaplotypeScore=137.0427;InbreedingCoeff=0.5311;MQ=79.62;MQ0=66;MQRankSum=-3.444;QD=13.21;ReadPosRankSum=5.583;VQSLOD=2.5257;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:32,0:17:21.06:362,21,0	0/1:9,0:6:1.22:66,0,1	0/0:69,0:43:65.10:0,65,1054	0/0:72,0:34:42.06:0,42,832	0/1:20,0:20:0.24:0,0,0	1/1:17,0:9:9.03:170,9,0	1/1:22,0:14:21.07:396,21,0	1/1:11,23:33:63.04:922,63,0	1/1:10,0:5:3.01:56,3,0	1/1:26,0:26:36.94:432,37,0	0/1:12,0:12:0:0,0,0	1/1:13,0:8:15.03:207,15,0	1/1:15,0:9:15.01:213,15,0	1/1:21,0:12:12.03:190,12,0	./.	1/1:19,0:8:12.04:225,12,0	0/1:12,0:11:12.68:41,0,13	1/1:7,0:7:8.20:78,8,0	1/1:8,15:21:36.06:562,36,0	1/1:8,6:10:8.94:94,9,0	1/1:28,0:17:24.07:420,24,0	0/1:5,11:13:0:0,0,0	1/1:16,0:7:9.03:171,9,0	1/1:18,0:13:26.88:443,27,0	0/1:18,0:18:0:0,0,0	1/1:20,0:19:39.20:323,39,0	1/1:17,0:11:21.03:357,21,0	1/1:5,0:5:9.01:138,9,0
chr10	42596740	.	CCT	C	1703.16	PASS	AB=1.000;AC=25;AF=0.500;AN=50;BaseQRankSum=8.539;DP=585;FS=11.428;HRun=0;HaplotypeScore=128.9840;InbreedingCoeff=-0.0055;MQ=74.06;MQ0=71;MQRankSum=-4.178;QD=4.80;ReadPosRankSum=9.115;VQSLOD=0.9620;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:15:20.27:20,0,169	0/0:8,0:5:6.74:0,7,67	0/0:63,0:37:84.30:0,84,1361	0/0:71,0:33:56.70:0,57,964	./.	0/1:16,0:8:7.54:21,0,8	0/1:22,0:14:36.29:36,0,111	0/1:37,0:36:32.61:33,0,429	0/1:8,0:3:3.31:3,0,41	1/1:6,17:23:55.70:678,56,0	./.	0/1:14,0:8:0.72:1,0,77	0/1:16,0:10:4.21:4,0,68	0/0:20,0:11:2.43:0,2,228	./.	0/1:20,0:9:15.50:16,0,88	1/1:9,3:11:14.63:144,15,0	1/1:6,1:7:9:118,9,0	0/1:25,0:23:18.48:18,0,233	0/0:13,0:9:7.22:0,7,131	0/1:27,0:15:32.53:33,0,114	0/0:18,0:15:9.03:0,9,140	1/1:16,0:7:7.73:28,8,0	0/1:20,0:15:38.07:38,0,64	1/1:7,11:17:8.99:99,9,0	1/1:7,12:18:45.03:541,45,0	0/1:19,0:12:29.42:29,0,86	0/1:6,0:6:1.77:2,0,124
chr10	42596750	.	CCTCT	C	3062.13	PASS	AB=0.992;AC=29;AF=0.537;AN=54;BaseQRankSum=4.496;DP=542;FS=29.720;HRun=0;HaplotypeScore=124.2850;InbreedingCoeff=-0.1067;MQ=60.63;MQ0=77;MQRankSum=-0.865;QD=8.80;ReadPosRankSum=9.421;VQSLOD=0.6157;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:11:28.66:72,0,29	0/1:7,0:4:7.26:11,0,7	0/0:52,0:26:68.29:0,68,1305	0/0:65,0:27:51.51:0,52,965	0/0:7,16:22:1.55:0,2,4	0/1:15,0:7:34.95:35,0,43	1/1:20,0:11:3.68:95,4,0	0/1:36,0:35:99:122,0,399	0/1:9,0:4:10.44:10,0,14	1/1:1,17:19:56.78:1105,57,0	0/0:3,9:13:0:0,0,0	0/1:12,0:6:15.03:22,0,15	0/1:14,0:8:28.20:28,0,30	1/1:13,0:4:8.57:45,9,0	0/0:4,5:8:2.43:0,2,6	0/1:17,0:6:4.94:50,0,5	1/1:5,1:10:8.60:136,9,0	0/1:5,1:9:10.97:182,0,11	0/1:23,0:20:86.59:87,0,136	1/1:12,0:8:2.81:14,3,0	1/1:24,0:12:12.09:134,12,0	0/0:18,0:15:2.97:0,3,20	1/1:20,0:11:8.66:50,9,0	0/1:19,0:14:11.14:86,0,11	./.	1/1:3,12:16:32.19:825,32,0	0/1:19,0:12:29.18:73,0,29	0/1:4,0:4:28.28:37,0,28
chr10	42596753	.	CT	C	3562.11	PASS	AB=0.765;AC=34;AF=0.630;AN=54;BaseQRankSum=3.823;DP=543;FS=35.624;HRun=2;HaplotypeScore=109.1044;InbreedingCoeff=-0.0544;MQ=54.38;MQ0=80;MQRankSum=1.813;QD=9.28;ReadPosRankSum=6.463;VQSLOD=-0.7277;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:11,15:9:4.70:195,0,5	1/1:2,4:3:1.12:35,1,0	0/0:48,0:22:46.39:0,46,557	0/0:61,0:23:41.92:0,42,472	0/0:24,0:22:0.11:0,0,0	0/1:2,13:7:23.94:93,0,24	1/1:6,14:11:5.18:234,5,0	0/1:37,0:35:99:338,0,220	0/1:4,5:4:12.87:30,0,13	1/1:20,0:19:56.50:473,56,0	0/0:13,0:13:0.47:0,0,1	1/1:6,7:7:8.84:111,9,0	0/1:8,6:8:6.31:98,0,6	1/1:6,8:5:12.04:142,12,0	1/1:9,0:8:0.33:0,0,0	0/1:10,8:6:3.88:130,0,4	1/1:11,0:10:8.38:73,8,0	0/1:10,0:10:25.70:87,0,26	0/1:23,0:20:65.17:271,0,65	1/1:13,0:9:5.49:46,5,0	1/1:8,18:14:24.05:273,24,0	0/1:19,0:16:5.49:5,0,14	1/1:9,11:11:8.78:103,9,0	0/1:9,11:15:21.68:218,0,22	./.	1/1:17,0:16:29.61:314,30,0	0/1:10,10:13:17.33:213,0,17	0/1:2,2:4:12.81:78,0,13
chr10	42596812	.	C	CAT	16502.43	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-3.777;DP=481;FS=19.602;HRun=0;HaplotypeScore=69.0379;InbreedingCoeff=0.8865;MQ=74.19;MQ0=9;MQRankSum=-5.359;QD=39.57;ReadPosRankSum=2.815;VQSLOD=4.6439;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:17:27.09:425,27,0	1/1:6,0:6:18.06:270,18,0	0/0:22,0:17:50.95:0,51,725	0/0:42,0:23:46.70:0,47,763	1/1:20,0:20:54.18:849,54,0	1/1:13,0:13:30.09:464,30,0	1/1:23,0:23:60.08:897,60,0	1/1:21,0:21:59:971,59,0	1/1:17,0:17:48.09:724,48,0	1/1:21,0:21:60.21:1098,60,0	1/1:15,0:15:39.12:611,39,0	1/1:16,0:16:39.13:598,39,0	1/1:5,1:4:9.03:146,9,0	1/1:14,1:15:36.12:600,36,0	1/1:0,12:13:3.01:61,3,0	1/1:14,0:14:39.13:628,39,0	1/1:12,0:12:36.10:497,36,0	1/1:13,0:13:36.08:491,36,0	1/1:14,0:14:39.13:634,39,0	1/1:25,0:25:65.94:1067,66,0	1/1:20,1:19:42.14:655,42,0	1/1:15,0:15:39.12:624,39,0	1/1:12,0:13:27.09:430,27,0	1/1:18,0:18:43.86:625,44,0	1/1:14,0:13:39.12:606,39,0	1/1:20,0:19:54.18:908,54,0	1/1:19,0:19:57.18:883,57,0	1/1:16,0:16:48.16:740,48,0
chr10	42597166	.	G	GA	4796.89	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=12.132;DP=491;FS=40.125;HRun=4;HaplotypeScore=71.8402;InbreedingCoeff=0.9932;MQ=88.73;MQ0=0;MQRankSum=-0.971;QD=35.01;ReadPosRankSum=3.492;VQSLOD=2.2136;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:93.25:0,93,1045	0/0:8,0:8:24.07:0,24,272	0/0:20,0:20:56.92:0,57,588	0/0:16,0:16:36.05:0,36,381	1/1:2,23:25:60.20:817,60,0	0/0:22,0:22:60.17:0,60,680	0/0:18,0:18:45.13:0,45,510	0/0:39,0:38:93.24:0,93,1040	0/0:16,0:16:42.12:0,42,476	1/1:1,15:16:45.15:615,45,0	1/1:2,15:17:33.11:451,33,0	0/0:12,0:12:27.06:0,27,297	0/0:19,0:19:54.15:0,54,613	0/0:14,0:14:42.10:0,42,467	1/1:2,16:18:45.15:616,45,0	0/0:23,0:23:69.20:0,69,783	1/1:1,13:14:36.12:492,36,0	1/1:1,15:16:45.15:615,45,0	0/0:10,0:10:21.04:0,21,229	0/0:22,0:22:57.15:0,57,636	0/0:18,0:18:51.14:0,51,579	0/0:9,0:9:27.08:0,27,306	0/0:10,0:10:27.08:0,27,306	0/0:19,0:19:54.11:0,54,598	1/1:1,12:13:33.11:451,33,0	1/1:0,18:18:54.18:739,54,0	0/0:23,0:23:63.18:0,63,714	0/0:4,0:4:12.03:0,12,136
chr10	42597864	.	AT	A	9426.26	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=10.756;DP=816;FS=15.292;HRun=2;HaplotypeScore=94.0841;InbreedingCoeff=0.9880;MQ=73.46;MQ0=1;MQRankSum=-2.971;QD=35.84;ReadPosRankSum=-0.578;VQSLOD=3.1233;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:17:48.16:0,48,719	1/1:1,18:19:54.18:701,54,0	0/0:34,0:33:99:0,99,1418	0/0:19,0:19:50.99:0,51,680	0/0:28,0:28:80.88:0,81,1191	0/0:26,0:26:78.25:0,78,1147	0/0:21,0:21:63.21:0,63,942	1/1:1,42:43:99:1621,126,0	0/0:35,0:35:99:0,105,1554	0/0:50,0:50:99:0,151,2246	0/0:28,0:28:81.27:0,81,1214	0/0:32,0:32:93.28:0,93,1315	0/0:39,0:39:99:0,117,1711	0/0:33,0:33:96.31:0,96,1419	0/0:37,0:37:99:0,111,1663	1/1:2,37:39:99:1325,102,0	0/0:10,0:10:30.10:0,30,450	0/0:5,0:5:8.02:0,8,133	1/1:0,18:18:54.17:688,54,0	1/1:3,48:51:99:1703,132,0	1/1:1,32:32:96.31:1246,96,0	0/0:25,0:25:75.21:0,75,1063	0/0:26,0:26:75.25:0,75,1124	0/0:19,0:19:57.17:0,57,832	0/0:33,0:33:96.32:0,96,1420	0/0:35,0:35:99:0,102,1529	1/1:0,35:35:93.30:1208,93,0	1/1:0,25:25:72.23:935,72,0
chr10	42598554	.	A	AT	5190.97	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-12.615;DP=678;FS=12.080;HRun=5;HaplotypeScore=129.8889;InbreedingCoeff=0.9994;MQ=90.37;MQ0=0;MQRankSum=-2.067;QD=33.71;ReadPosRankSum=-1.199;VQSLOD=2.6278;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,104,1084	1/1:1,10:12:24.08:310,24,0	0/0:30,0:30:77.32:0,77,762	0/0:24,0:24:43.78:0,44,505	0/0:21,0:21:35.38:0,35,585	0/0:33,0:33:87.18:0,87,911	0/0:25,0:25:63.10:0,63,656	1/1:0,28:28:81.20:981,81,0	0/0:23,0:23:63.11:0,63,652	0/0:27,0:27:75.17:0,75,789	0/0:28,0:28:72.16:0,72,757	0/0:27,0:27:75.18:0,75,800	0/0:36,0:36:93.21:0,93,990	0/0:26,0:26:78.16:0,78,819	0/0:32,0:32:84.17:0,84,885	1/1:2,20:22:54.18:710,54,0	0/0:22,0:22:63.11:0,63,658	0/0:14,0:14:39.10:0,39,418	1/1:0,14:14:42.09:506,42,0	1/1:1,20:21:60.12:751,60,0	1/1:1,12:13:27.09:355,27,0	0/0:23,0:23:66.15:0,66,700	0/0:21,0:21:60.12:0,60,634	0/0:29,0:29:78.17:0,78,829	0/0:20,0:20:54.13:0,54,580	0/0:23,0:23:54.11:0,54,572	1/1:1,30:31:81.26:1064,81,0	1/1:0,13:13:39.13:513,39,0
chr10	42599644	.	T	TTATA	8973.04	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=11.097;DP=758;FS=7.649;HRun=0;HaplotypeScore=133.8828;InbreedingCoeff=0.9809;MQ=64.30;MQ0=0;MQRankSum=-9.744;QD=44.87;ReadPosRankSum=-5.230;VQSLOD=3.8099;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:72.20:0,72,1219	1/1:0,10:10:24.08:522,24,0	0/0:26,0:22:13.62:0,14,463	0/0:12,0:11:7.34:0,7,174	0/0:25,0:25:72.19:0,72,1194	0/0:18,0:18:45.15:0,45,770	0/0:26,0:27:63.20:0,63,1068	1/1:32,30:65:99:2993,135,0	0/0:23,0:23:57.20:0,57,987	0/0:42,0:42:99:0,114,1943	0/0:27,0:27:75.26:0,75,1292	0/0:35,0:35:96.33:0,96,1670	0/0:27,0:27:63.21:0,63,1070	0/0:33,0:33:90.31:0,90,1565	0/0:33,0:33:84.26:0,84,1434	1/1:3,24:27:60.21:1457,60,0	0/0:29,0:29:78.21:0,78,1298	0/0:19,0:19:42.13:0,42,688	1/1:7,10:17:33.08:780,33,0	1/1:6,18:27:56.98:1157,57,0	1/1:3,13:17:27.09:578,27,0	0/0:31,0:31:81.27:0,81,1378	0/0:34,0:34:90.30:0,90,1535	0/0:29,0:29:72.21:0,72,1195	0/0:31,0:31:84.28:0,84,1433	0/0:26,0:26:72.24:0,72,1228	1/1:3,24:27:45.15:1086,45,0	1/1:1,6:10:18.06:399,18,0
chr10	42599852	.	GCACACA	G	2233.68	PASS	AB=0.706;AC=28;AF=0.519;AN=54;BaseQRankSum=7.363;DP=639;FS=5.338;HRun=0;HaplotypeScore=186.1706;InbreedingCoeff=0.1886;MQ=53.28;MQ0=9;MQRankSum=-8.102;QD=5.00;ReadPosRankSum=0.836;VQSLOD=1.9072;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:20,15:36:5.61:96,6,0	0/1:4,6:12:32.30:90,0,32	0/0:7,0:3:0.47:0,0,1	./.	1/1:14,5:19:9.23:116,9,0	0/1:7,0:19:13.86:73,0,14	0/1:20,0:33:4.44:13,0,4	1/1:22,0:21:14.33:90,14,0	1/1:6,0:16:11.63:167,12,0	0/1:14,0:35:99:132,0,111	0/0:12,0:15:2.69:0,3,23	0/0:38,0:39:51.76:0,52,945	0/0:17,0:17:25.48:0,25,450	0/0:29,0:31:19.51:0,20,683	0/1:18,0:24:46.82:173,0,47	1/1:11,2:19:15.04:247,15,0	1/1:12,0:30:12.01:147,12,0	0/1:12,0:19:39.95:222,0,40	0/1:18,1:21:7.91:98,0,8	1/1:15,2:20:23.81:335,24,0	0/1:31,15:46:2.08:2,0,55	0/0:19,0:20:29.47:0,29,482	0/0:12,0:12:6.86:0,7,293	0/0:40,0:41:77.19:0,77,1725	0/1:12,0:23:36.75:93,0,37	0/1:15,0:23:27.84:91,0,28	1/1:6,9:15:6.32:121,6,0	1/1:6,1:7:6.02:103,6,0
chr10	42600363	.	TA	T	7333.56	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=14.188;DP=763;FS=3.465;HRun=2;HaplotypeScore=74.1464;InbreedingCoeff=0.9994;MQ=81.10;MQ0=0;MQRankSum=-2.040;QD=35.09;ReadPosRankSum=-0.043;VQSLOD=5.1624;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,129,1865	1/1:1,10:11:24.08:312,24,0	0/0:27,0:27:60.73:0,61,960	0/0:29,0:29:37.18:0,37,897	0/0:29,0:29:87.28:0,87,1281	0/0:34,0:34:96.31:0,96,1417	0/0:28,0:28:81.27:0,81,1214	1/1:0,50:50:99:1904,150,0	0/0:24,0:24:69.22:0,69,993	0/0:35,0:35:96.26:0,96,1364	0/0:16,0:16:48.15:0,48,695	0/0:41,0:41:99:0,123,1799	0/0:25,0:25:72.24:0,72,1079	0/0:20,0:20:60.20:0,60,896	0/0:33,0:33:96.32:0,96,1420	1/1:1,29:30:27.25:851,27,0	0/0:22,0:22:66.22:0,66,983	0/0:30,0:30:87.23:0,87,1253	1/1:0,21:21:63.20:811,63,0	1/1:0,27:27:72.23:928,72,0	1/1:0,31:31:87.28:1130,87,0	0/0:35,0:35:99:0,102,1503	0/0:13,0:13:39.13:0,39,582	0/0:23,0:23:69.23:0,69,1033	0/0:19,0:19:54.18:0,54,808	0/0:28,0:28:75.25:0,75,1106	1/1:1,28:29:78.25:1008,78,0	1/1:0,10:10:30.10:389,30,0
chr10	42601556	.	AGTGTGT	A	1058.15	PASS	AB=0.863;AC=20;AF=0.417;AN=48;BaseQRankSum=3.360;DP=614;FS=24.992;HRun=0;HaplotypeScore=131.4454;InbreedingCoeff=0.4793;MQ=74.10;MQ0=20;MQRankSum=-1.239;QD=4.17;ReadPosRankSum=-1.398;VQSLOD=0.9224;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:28:5.10:0,5,83	./.	./.	./.	0/0:10,3:12:0:0,0,0	1/1:16,0:16:6:74,6,0	1/1:20,2:23:5.88:81,6,0	0/0:26,0:24:15.02:0,15,244	1/1:20,3:25:12.04:223,12,0	1/1:22,0:19:4.72:100,5,0	./.	0/0:23,0:25:34.32:0,34,737	0/0:16,0:18:12.04:0,12,215	0/0:21,0:20:21.05:0,21,491	1/1:19,1:21:8.68:128,9,0	1/1:15,0:21:14.88:208,15,0	1/1:23,2:26:5.08:285,5,0	1/1:26,0:25:0.88:2,1,0	0/0:19,0:19:15.05:0,15,382	0/0:17,0:15:2.92:0,3,94	0/0:34,0:43:9.03:0,9,242	0/1:20,1:25:29.98:30,0,394	0/0:12,0:13:6.02:0,6,103	0/1:29,0:31:23.44:23,0,404	1/1:7,4:11:2.61:60,3,0	0/0:21,0:21:3.01:0,3,35	0/0:16,0:19:3.48:0,3,56	0/0:1,0:1:3.01:0,3,51
chr10	42602490	.	G	GT	1142.81	PASS	AC=24;AF=0.857;AN=28;BaseQRankSum=-2.372;DP=85;FS=0.000;HRun=2;HaplotypeScore=18.2166;InbreedingCoeff=0.3224;MQ=44.41;MQ0=20;MQRankSum=-2.372;QD=23.81;ReadPosRankSum=1.327;VQSLOD=3.2146;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:13,0:2:3.01:0,3,33	0/0:8,0:1:2.96:0,3,19	./.	./.	1/1:2,2:3:3.01:45,3,0	./.	1/1:0,2:2:6.02:89,6,0	1/1:0,2:2:3.01:45,3,0	1/1:0,3:3:9.03:133,9,0	./.	1/1:1,2:2:6.02:88,6,0	1/1:0,3:2:6.02:89,6,0	./.	./.	./.	./.	./.	./.	1/1:1,1:1:3.01:44,3,0	1/1:3,4:6:8.89:116,9,0	1/1:0,5:5:12:142,12,0	./.	1/1:3,9:9:21.07:312,21,0	1/1:0,2:2:6.02:89,6,0	1/1:0,3:2:3.01:44,3,0	./.
chr10	42602680	.	GGA	G	687.86	PASS	AB=0.820;AC=12;AF=0.240;AN=50;BaseQRankSum=4.773;DP=292;FS=5.179;HRun=0;HaplotypeScore=88.3732;InbreedingCoeff=-0.1261;MQ=31.28;MQ0=57;MQRankSum=-4.459;QD=5.88;ReadPosRankSum=0.364;VQSLOD=2.1451;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:18:38.91:0,39,499	0/0:6,0:5:2.99:0,3,24	./.	./.	0/0:15,1:13:26.95:0,27,256	0/0:8,0:6:12.32:0,12,157	0/0:12,0:5:14.97:0,15,184	./.	0/0:9,0:5:14.88:0,15,109	0/1:8,4:7:38.26:132,0,38	0/1:12,4:10:20.99:109,0,21	0/0:13,0:8:20.95:0,21,270	0/0:10,0:8:17.96:0,18,221	0/0:15,0:12:23.41:0,23,464	0/1:6,3:8:34.79:81,0,35	0/1:5,3:7:54.70:69,0,55	0/0:6,2:2:1.25:0,1,3	0/1:8,0:5:16.59:17,0,107	1/1:3,1:1:3.01:40,3,0	0/0:7,1:6:2.99:0,3,24	0/1:7,1:7:18.16:18,0,189	0/0:10,0:5:9.70:0,10,135	0/0:14,0:10:23.79:0,24,356	0/0:22,0:17:41.87:0,42,502	0/1:12,2:11:61.66:62,0,126	0/1:7,5:10:99:204,0,110	0/1:11,4:12:28.79:29,0,96	0/1:10,1:7:3.04:67,0,3
chr10	42603094	.	TACATACATACACACACACAC	T	518.19	PASS	AB=1.000;AC=8;AF=0.143;AN=56;BaseQRankSum=7.103;DP=504;FS=9.691;HRun=0;HaplotypeScore=239.6297;InbreedingCoeff=0.0558;MQ=71.69;MQ0=15;MQRankSum=-6.454;QD=3.55;ReadPosRankSum=-0.782;VQSLOD=1.2509;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:16:20.76:0,21,296	0/0:3,0:3:3.01:0,3,255	0/0:22,0:19:50.35:0,50,675	0/0:33,0:32:81.19:0,81,1672	1/1:0,18:19:5.89:256,6,0	0/1:19,0:19:35.10:35,0,560	0/0:23,0:22:49.05:0,49,902	0/0:26,0:26:69.21:0,69,1143	0/1:24,0:24:99:105,0,664	0/0:17,0:16:48.14:0,48,811	0/1:22,0:20:85.49:85,0,358	0/0:12,0:11:30.07:0,30,1079	0/0:12,0:12:30.09:0,30,847	0/0:8,0:8:24.08:0,24,755	0/1:29,0:29:77.75:78,0,719	0/0:14,0:13:36.11:0,36,1009	0/0:23,0:23:44.74:0,45,891	0/1:22,0:21:34.37:34,0,363	0/0:16,0:14:39.08:0,39,1064	0/0:11,0:10:24.08:0,24,1003	0/0:26,0:23:48.16:0,48,1915	0/0:11,0:11:21.07:0,21,618	0/0:15,0:15:18.06:0,18,551	0/0:24,0:21:42.13:0,42,942	0/1:11,0:11:59.83:60,0,134	0/0:16,0:15:18.90:0,19,483	0/0:21,0:18:46.03:0,46,1713	0/0:6,0:6:18.06:0,18,640
chr10	42603102	.	TACACACACACACACAC	T	2214.80	PASS	AB=0.778;AC=16;AF=0.320;AN=50;BaseQRankSum=6.022;DP=508;FS=12.981;HRun=0;HaplotypeScore=193.3037;InbreedingCoeff=0.4235;MQ=61.74;MQ0=20;MQRankSum=-4.359;QD=10.96;ReadPosRankSum=0.788;VQSLOD=2.0083;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:6,0:6:3.01:0,3,222	./.	./.	1/1:19,0:19:6.02:175,6,0	0/1:12,8:20:5.47:336,0,5	0/0:22,0:20:0.99:0,1,2	0/0:22,0:22:8.96:0,9,80	0/1:14,8:22:27.06:361,0,27	1/1:18,0:17:1.50:52,2,0	1/1:13,6:19:6.02:242,6,0	0/0:12,0:13:21.53:0,22,811	0/0:10,0:12:15.05:0,15,509	0/0:11,0:11:12.02:0,12,437	1/1:15,12:28:15.04:552,15,0	0/0:15,0:15:15.05:0,15,736	0/1:21,0:23:18.10:18,0,170	0/1:13,6:18:61.84:249,0,62	0/0:15,0:13:15.32:0,15,629	0/0:13,0:12:18.04:0,18,830	0/0:29,0:26:21.07:0,21,1213	0/0:11,0:11:5.72:0,6,238	0/0:12,0:12:6.02:0,6,230	0/0:27,0:29:26.85:0,27,1157	1/1:6,9:15:5.86:261,6,0	1/1:10,7:16:6.01:125,6,0	0/0:16,0:16:24.08:0,24,1013	0/0:8,0:6:12.04:0,12,411
chr10	42603341	.	G	GCTTGAAGAA	42587.70	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-5.534;DP=548;FS=3.634;HRun=0;HaplotypeScore=119.4826;InbreedingCoeff=0.9429;MQ=83.17;MQ0=0;MQRankSum=-11.034;QD=85.52;ReadPosRankSum=2.775;VQSLOD=5.0935;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,30:41:84.29:3603,84,0	1/1:0,7:11:21.07:886,21,0	0/0:21,0:21:63.17:0,63,1594	0/0:29,0:28:75.22:0,75,2026	1/1:0,14:18:42.10:906,42,0	1/1:0,9:13:27.09:1362,27,0	1/1:0,20:31:60.21:2534,60,0	1/1:0,13:33:99:3373,99,0	1/1:0,14:20:45.15:2180,45,0	1/1:1,13:21:57.18:2314,57,0	1/1:0,10:12:32.94:531,33,0	1/1:1,14:20:39.13:1808,39,0	1/1:0,8:16:20.99:893,21,0	1/1:0,16:24:42.14:1951,42,0	1/1:0,17:25:48.16:2186,48,0	1/1:0,20:22:54.19:2636,54,0	1/1:2,11:18:27.09:1281,27,0	1/1:1,5:10:21.07:1056,21,0	1/1:0,7:19:57.11:2047,57,0	1/1:1,18:23:54.19:1817,54,0	1/1:0,5:8:15.05:580,15,0	1/1:1,6:13:24.05:735,24,0	1/1:0,7:12:17.58:529,18,0	1/1:0,7:13:9.03:280,9,0	1/1:0,10:14:27.09:1362,27,0	1/1:1,20:31:78.23:3367,78,0	1/1:1,17:21:39.13:1615,39,0	1/1:0,6:8:15.05:757,15,0
chr10	42603617	.	TTTGCTTGC	T	5783.43	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=11.155;DP=822;FS=5.491;HRun=0;HaplotypeScore=216.5803;InbreedingCoeff=0.9985;MQ=60.20;MQ0=0;MQRankSum=-12.596;QD=41.31;ReadPosRankSum=2.692;VQSLOD=4.3945;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,138,5456	0/0:15,0:15:42.14:0,42,1661	0/0:32,0:28:59.01:0,59,1752	0/0:32,0:28:72.25:0,72,2668	0/0:32,0:32:78.27:0,78,3118	0/0:23,0:23:66.23:0,66,2684	0/0:32,0:32:66.21:0,66,2599	0/0:29,0:29:48.16:0,48,1876	0/0:29,0:29:75.26:0,75,3036	0/0:40,0:40:99:0,111,4289	0/0:20,0:20:51.18:0,51,2132	1/1:11,17:28:45.15:1146,45,0	1/1:2,19:21:45.15:1148,45,0	1/1:3,23:26:60.21:1542,60,0	0/0:36,0:36:93.29:0,93,3562	0/0:41,0:41:99:0,114,4621	0/0:41,0:40:99:0,114,4582	0/0:28,0:28:66.18:0,66,2586	0/0:21,0:21:45.15:0,45,1612	0/0:30,0:30:72.25:0,72,2889	0/0:41,0:41:99:0,99,3983	1/1:5,18:23:41.92:804,42,0	1/1:3,11:14:20.86:513,21,0	1/1:8,20:28:26.92:630,27,0	0/0:32,0:32:90.29:0,90,3620	0/0:43,0:43:99:0,120,4842	0/0:22,0:22:45.15:0,45,1878	0/0:8,0:8:24.08:0,24,911
chr10	42604327	.	ATGTGTGTGTGTG	A	5548.75	PASS	AB=0.659;AC=31;AF=0.596;AN=52;BaseQRankSum=9.651;DP=629;FS=17.652;HRun=0;HaplotypeScore=214.6296;InbreedingCoeff=0.3014;MQ=66.16;MQ0=8;MQRankSum=-8.825;QD=13.73;ReadPosRankSum=-0.470;VQSLOD=2.3559;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,2:30:29.02:0,29,293	1/1:3,0:8:2.80:7,3,0	./.	0/0:47,0:28:8.98:0,9,81	1/1:2,0:16:6.02:116,6,0	0/1:12,13:25:1.95:298,0,2	1/1:17,11:28:8.23:539,8,0	0/0:28,0:27:32.97:0,33,404	0/1:10,9:20:10.08:536,0,10	1/1:10,0:21:12.04:334,12,0	1/1:5,0:19:8.24:99,8,0	1/1:10,9:20:8.10:467,8,0	0/1:12,13:26:27.29:779,0,27	0/1:15,11:26:17.79:263,0,18	1/1:5,0:18:12.04:333,12,0	0/1:12,0:29:45.38:59,0,45	1/1:5,0:19:6.02:168,6,0	1/1:6,0:16:3.01:84,3,0	0/0:14,0:14:6.01:0,6,145	0/0:9,0:14:14.61:0,15,399	0/0:27,0:42:42.04:0,42,863	0/1:10,15:25:10.09:298,0,10	1/1:8,8:15:2.84:103,3,0	0/1:19,16:36:99:395,0,162	1/1:4,0:19:18.06:503,18,0	1/1:5,0:16:6.02:168,6,0	0/0:8,0:21:15.05:0,15,488	./.
chr10	42604858	.	CTCT	C	1997.46	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=10.180;DP=658;FS=2.048;HRun=0;HaplotypeScore=98.3263;InbreedingCoeff=0.9645;MQ=87.58;MQ0=1;MQRankSum=-3.180;QD=37.69;ReadPosRankSum=0.710;VQSLOD=4.6299;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,99,2046	0/0:4,0:4:12.04:0,12,262	0/0:20,0:20:8.04:0,8,880	0/0:31,0:30:60.21:0,60,1228	0/0:35,0:35:99:0,102,2173	1/1:0,12:12:30.10:475,30,0	1/1:1,20:21:57.19:904,57,0	0/0:31,0:31:70.48:0,70,1488	1/1:1,19:20:48.16:761,48,0	0/0:27,0:27:72.25:0,72,1541	0/0:21,0:21:51.18:0,51,1112	0/0:27,0:27:75.26:0,75,1619	0/0:18,0:18:51.16:0,51,1073	0/0:23,0:23:66.23:0,66,1443	0/0:21,0:21:63.22:0,63,1377	0/0:17,0:17:51.18:0,51,1115	0/0:20,0:20:60.21:0,60,1295	0/0:21,0:21:60.21:0,60,1309	0/0:24,0:24:57.16:0,57,1161	0/0:32,0:32:87.29:0,87,1820	0/0:36,0:36:99:0,108,2315	0/0:21,0:21:54.17:0,54,1120	0/0:17,0:17:51.16:0,51,1074	0/0:16,0:16:45.15:0,45,982	0/0:22,0:22:63.22:0,63,1377	0/0:31,0:31:84.28:0,84,1779	0/0:33,0:33:99:0,99,2165	0/0:21,0:21:60.16:0,60,1169
chr10	42604977	.	A	AT	6064.26	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-13.323;DP=608;FS=1.170;HRun=3;HaplotypeScore=65.7593;InbreedingCoeff=0.9982;MQ=66.60;MQ0=1;MQRankSum=0.801;QD=35.26;ReadPosRankSum=-0.790;VQSLOD=5.0445;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,105,1260	1/1:0,12:12:20.89:294,21,0	0/0:12,0:11:24.07:0,24,288	0/0:17,0:13:33.10:0,33,384	0/0:26,0:26:57.17:0,57,679	0/0:27,0:27:75.22:0,75,887	0/0:18,0:18:51.16:0,51,611	1/1:3,30:33:87.26:1180,87,0	0/0:21,0:21:57.16:0,57,669	0/0:28,0:28:81.25:0,81,971	0/0:20,0:20:54.16:0,54,646	0/0:20,0:20:57.17:0,57,684	0/0:21,0:21:54.15:0,54,636	0/0:19,0:19:54.16:0,54,646	0/0:25,0:25:75.22:0,75,886	1/1:1,19:20:39.12:546,39,0	0/0:26,0:26:75.20:0,75,875	0/0:14,0:14:39.12:0,39,467	1/1:0,20:20:60.19:821,60,0	1/1:4,26:30:72.24:997,72,0	1/1:0,14:14:42.14:588,42,0	0/0:10,0:10:21.06:0,21,252	0/0:28,0:28:75.21:0,75,888	0/0:22,0:21:66.20:0,66,792	0/0:23,0:23:69.21:0,69,827	0/0:23,0:23:66.20:0,66,791	1/1:1,23:24:69.23:966,69,0	1/1:1,18:19:48.16:672,48,0
chr10	42605218	.	C	CTTTTTT	9049.76	PASS	AB=0.549;AC=30;AF=0.536;AN=56;BaseQRankSum=14.799;DP=656;FS=0.639;HRun=3;HaplotypeScore=171.4797;InbreedingCoeff=0.8607;MQ=79.09;MQ0=0;MQRankSum=-9.404;QD=26.16;ReadPosRankSum=-4.513;VQSLOD=-0.1627;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:64,0:64:99:0,180,3762	1/1:0,0:10:12.44:37,12,0	0/0:28,0:28:63.09:0,63,1281	0/0:25,0:25:23.80:0,24,789	1/1:21,0:28:72.40:973,72,0	0/0:19,0:19:57.18:0,57,1209	0/0:26,0:26:75.14:0,75,1418	1/1:10,0:35:18.49:227,18,0	0/0:23,0:23:69.20:0,69,1429	1/1:19,9:30:77.79:1715,78,0	1/1:5,17:27:54.03:1345,54,0	0/0:22,0:22:60.14:0,60,1231	0/0:22,0:22:63.19:0,63,1335	0/0:29,0:29:81.24:0,81,1641	1/1:9,7:18:50.90:1103,51,0	1/1:1,0:19:37.56:117,38,0	1/1:5,1:14:15.05:440,15,0	1/1:2,8:12:21.07:650,21,0	0/1:4,0:21:13.30:120,0,13	1/1:2,0:23:40.28:141,40,0	1/1:3,0:23:24.32:90,24,0	0/0:19,0:19:57.18:0,57,1211	0/0:12,0:12:36.12:0,36,786	0/0:21,0:21:60.20:0,60,1312	1/1:12,2:21:41.84:758,42,0	1/1:15,7:23:59.83:1180,60,0	0/1:4,0:24:8.25:45,0,8	1/1:0,0:18:33.30:109,33,0
chr10	42605327	.	TCCGGG	T	20518.59	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=-14.621;DP=723;FS=2.797;HRun=0;HaplotypeScore=185.5045;InbreedingCoeff=0.9975;MQ=79.09;MQ0=0;MQRankSum=-8.114;QD=52.48;ReadPosRankSum=3.057;VQSLOD=5.3485;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:59,0:59:99:0,169,5134	1/1:0,7:7:15.05:326,15,0	0/0:15,0:15:44.94:0,45,1208	0/0:24,0:24:66.14:0,66,1757	1/1:1,32:33:81.28:1747,81,0	0/0:13,0:13:36.12:0,36,864	0/0:28,0:28:77.70:0,78,1665	1/1:4,42:46:99:2583,126,0	0/0:25,0:25:69.05:0,69,1560	1/1:0,21:21:63.20:1323,63,0	1/1:0,30:30:84.29:1822,84,0	0/0:29,0:29:84.26:0,84,2438	0/0:30,0:30:84.11:0,84,2507	0/0:39,0:39:99:0,111,3317	1/1:4,26:30:66.23:1407,66,0	1/1:1,27:28:60.21:1303,60,0	1/1:1,26:27:54.19:1172,54,0	1/1:1,18:19:39.13:847,39,0	1/1:4,19:23:51.16:1006,51,0	1/1:0,24:24:69.24:1497,69,0	1/1:1,33:34:69.24:1471,69,0	0/0:22,0:22:66.23:0,66,2043	0/0:25,0:25:66.21:0,66,2003	0/0:23,0:23:63.17:0,63,1879	1/1:0,21:21:51.18:1106,51,0	1/1:2,16:18:48.16:1020,48,0	1/1:0,22:22:63.22:1368,63,0	1/1:0,8:8:24.08:521,24,0
chr10	42605355	.	A	AT	9207.51	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-13.247;DP=693;FS=3.494;HRun=4;HaplotypeScore=153.0146;InbreedingCoeff=0.9942;MQ=83.00;MQ0=0;MQRankSum=2.662;QD=36.39;ReadPosRankSum=6.121;VQSLOD=2.8386;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,48:51:99:1825,135,0	0/0:7,0:7:12.03:0,12,136	0/0:21,0:21:59.39:0,59,625	0/0:29,0:29:60.09:0,60,641	0/0:27,0:27:69.19:0,69,774	1/1:0,17:17:48.16:656,48,0	1/1:2,17:19:45.15:616,45,0	0/0:40,0:40:96.23:0,96,1072	1/1:1,24:25:72.24:980,72,0	0/0:17,0:17:39.11:0,39,442	0/0:27,0:27:81.22:0,81,908	1/1:3,23:26:66.22:903,66,0	1/1:2,22:24:63.21:862,63,0	1/1:2,29:31:90.29:1213,90,0	0/0:30,0:30:78.22:0,78,884	0/0:25,0:25:63.16:0,63,705	0/0:32,0:32:77.64:0,78,857	0/0:23,0:23:54.09:0,54,598	0/0:21,0:21:51.14:0,51,577	0/0:24,0:24:66.15:0,66,734	0/0:35,0:35:87.25:0,87,986	1/1:1,21:22:54.14:717,54,0	1/1:1,18:19:54.18:738,54,0	1/1:1,18:19:51.17:698,51,0	0/0:23,0:23:60.14:0,60,658	0/0:25,0:25:69.19:0,69,783	0/0:24,0:24:69.20:0,69,783	0/0:10,0:10:18.05:0,18,204
chr10	42606626	.	AT	A	134.39	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.979;DP=582;FS=6.753;HRun=8;HaplotypeScore=58.9314;InbreedingCoeff=0.9890;MQ=77.85;MQ0=0;MQRankSum=0.268;QD=14.93;ReadPosRankSum=0.325;VQSLOD=3.3196;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:72.09:0,72,848	1/1:0,8:9:26.03:228,26,0	0/0:18,0:18:42.10:0,42,490	0/0:11,0:11:17.84:0,18,182	0/0:39,0:39:99:0,108,1304	0/0:24,0:24:63.17:0,63,740	0/0:24,0:24:63.19:0,63,756	0/0:23,0:23:57.16:0,57,669	0/0:18,0:18:54.17:0,54,652	0/0:24,0:24:69.21:0,69,834	0/0:22,0:22:63.19:0,63,760	0/0:17,0:17:51.15:0,51,609	0/0:16,0:16:42.11:0,42,495	0/0:15,0:15:45.13:0,45,532	0/0:15,0:15:36.11:0,36,435	0/0:23,0:23:60.18:0,60,725	0/0:23,0:23:57.13:0,57,672	0/0:18,0:18:48.11:0,48,563	0/0:24,0:24:36.62:0,37,651	0/0:20,0:20:54.17:0,54,651	0/0:17,0:17:45.14:0,45,544	0/0:23,0:23:60.15:0,60,696	0/0:22,0:22:60.17:0,60,705	0/0:11,0:11:27.08:0,27,326	0/0:16,0:16:42.13:0,42,507	0/0:27,0:27:72.21:0,72,857	0/0:25,0:25:66.13:0,66,774	0/0:33,0:33:93.29:0,93,1124
chr10	42607080	.	G	GCGAAC	4616.58	PASS	AB=0.818;AC=12;AF=0.214;AN=56;BaseQRankSum=10.274;DP=586;FS=8.952;HRun=0;HaplotypeScore=148.7507;InbreedingCoeff=0.0913;MQ=86.01;MQ0=0;MQRankSum=-10.980;QD=22.97;ReadPosRankSum=-2.370;VQSLOD=3.5954;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,105,2282	1/1:5,5:10:21.63:462,22,0	0/0:26,0:26:78.16:0,78,1437	0/0:20,0:20:51.14:0,51,1038	0/0:17,0:17:6.10:0,6,557	0/0:23,0:23:63.13:0,63,1369	0/0:24,0:24:72.16:0,72,1448	0/1:25,3:28:99:438,0,151	0/0:30,0:30:90.29:0,90,2006	0/0:22,0:21:21.20:0,21,713	0/0:15,0:15:22.13:0,22,453	0/0:14,0:14:42.13:0,42,932	0/0:18,0:18:54.11:0,54,1107	0/0:21,0:21:60.14:0,60,1282	0/0:34,0:34:31.16:0,31,1133	0/1:9,5:14:25.96:444,0,26	0/0:21,0:21:63.21:0,63,830	0/0:12,0:12:9.10:0,9,323	0/1:19,3:22:72.89:386,0,73	1/1:10,18:28:0.49:1159,0,0	0/1:15,6:21:42.72:298,0,43	0/0:18,0:18:54.12:0,54,1061	0/0:19,0:19:54.17:0,54,1190	0/0:15,0:15:42.14:0,42,977	0/1:27,0:27:4.74:5,0,796	0/1:21,0:21:19:19,0,597	0/1:8,12:20:14.35:842,0,14	0/1:4,6:10:10.26:564,0,10
chr10	42607081	.	T	TGC	1304.39	PASS	AB=0.746;AC=9;AF=0.161;AN=56;BaseQRankSum=10.449;DP=592;FS=11.727;HRun=0;HaplotypeScore=123.5977;InbreedingCoeff=-0.0079;MQ=87.51;MQ0=0;MQRankSum=-10.384;QD=8.42;ReadPosRankSum=1.582;VQSLOD=2.9405;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,102,1559	0/1:5,5:10:63.01:153,0,63	0/0:28,0:28:74.65:0,75,1012	0/0:21,0:21:50.66:0,51,719	0/0:16,0:16:44.78:0,45,363	0/0:23,0:23:66.19:0,66,959	0/0:23,0:23:69.22:0,69,1024	0/1:26,3:29:96.24:96,0,275	0/0:30,0:30:90.29:0,90,1354	0/0:22,0:21:59.51:0,60,442	0/0:15,0:15:38.69:0,39,287	0/0:14,0:14:42.14:0,42,642	0/0:17,0:17:51.16:0,51,743	0/0:21,0:21:60.17:0,60,869	0/0:34,0:34:96.81:0,97,772	0/1:9,5:14:70.62:112,0,71	0/0:21,0:21:44.83:0,45,406	0/0:12,0:12:8.79:0,9,173	0/1:20,3:23:99:123,0,233	0/1:12,17:29:65.41:407,0,65	0/1:14,6:20:38.75:39,0,75	0/0:18,0:18:54.16:0,54,781	0/0:20,0:20:54.18:0,54,816	0/0:15,0:15:42.14:0,42,643	0/0:28,0:28:76.03:0,76,566	0/0:23,0:23:56.24:0,56,417	0/1:8,12:20:52.89:311,0,53	1/1:4,6:10:2.85:202,3,0
chr10	42607187	.	ACACACACACACACACACACACACAC	A	108.19	PASS	AB=0.821;AC=4;AF=0.074;AN=54;BaseQRankSum=-3.022;DP=447;FS=5.096;HRun=0;HaplotypeScore=215.1522;InbreedingCoeff=0.0505;MQ=53.50;MQ0=30;MQRankSum=0.130;QD=2.08;ReadPosRankSum=-1.938;VQSLOD=2.4021;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:26:24.40:0,24,1414	0/0:12,0:11:12.04:0,12,498	0/0:19,0:8:3.01:0,3,58	0/1:22,0:11:0.84:1,0,162	0/0:23,0:19:15.05:0,15,390	0/0:17,0:17:6.02:0,6,305	0/0:26,0:26:12.04:0,12,691	0/0:22,0:20:18.06:0,18,443	0/0:18,0:17:1.29:0,1,149	0/0:14,0:13:21.07:0,21,696	0/0:15,0:13:3.01:0,3,126	0/0:14,0:14:9.19:0,9,1975	0/0:15,0:14:11.89:0,12,929	0/0:11,0:11:9.03:0,9,697	0/0:20,0:17:12.04:0,12,458	0/0:13,0:12:14.88:0,15,787	0/1:8,10:18:37.86:181,0,38	0/0:17,0:16:5.99:0,6,122	0/0:6,0:6:2.99:0,3,24	0/0:12,0:10:12.04:0,12,360	./.	0/0:9,0:9:3.48:0,3,220	0/0:10,0:10:18.99:0,19,1418	0/0:19,0:18:8.11:0,8,695	0/0:14,0:11:9.03:0,9,261	1/1:12,0:8:1.25:3,1,0	0/0:21,0:21:27.09:0,27,792	0/0:12,0:11:18.06:0,18,522
chr10	42607199	.	ACACACACACACAC	A	3130.93	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=0.558;DP=491;FS=9.921;HRun=0;HaplotypeScore=126.7515;InbreedingCoeff=0.4715;MQ=43.27;MQ0=58;MQRankSum=-5.541;QD=10.80;ReadPosRankSum=-0.571;VQSLOD=1.9282;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:29:38.57:39,0,794	0/1:13,0:12:92.70:171,0,93	0/0:22,0:3:3.01:0,3,31	0/0:28,0:6:5.99:0,6,98	1/1:11,16:20:15.05:335,15,0	0/0:22,0:22:4.70:0,5,20	0/0:24,0:24:7.52:0,8,113	1/1:26,0:23:47.75:472,48,0	0/0:19,0:18:3.21:0,3,40	1/1:16,1:13:23.66:319,24,0	1/1:15,0:11:2.98:22,3,0	0/0:16,0:16:9.18:0,9,659	0/0:17,0:15:11.93:0,12,321	0/0:10,0:10:9.03:0,9,240	1/1:20,0:17:11.87:162,12,0	0/1:11,0:9:11.38:11,0,32	0/1:19,0:19:38.83:77,0,39	1/1:20,0:16:6.02:151,6,0	1/1:6,0:6:11.94:109,12,0	1/1:13,0:9:12.04:261,12,0	0/1:8,0:8:0:0,0,0	0/0:12,0:11:3.48:0,3,95	0/0:13,0:13:17.02:0,17,537	0/0:18,0:17:7.51:0,8,237	1/1:13,1:9:9.03:227,9,0	1/1:18,0:6:6.01:66,6,0	1/1:20,0:18:27.04:517,27,0	1/1:13,0:11:18.06:378,18,0
chr10	42607201	.	ACACACACACAC	A	4713.32	PASS	AB=0.938;AC=33;AF=0.589;AN=56;BaseQRankSum=0.743;DP=492;FS=10.240;HRun=0;HaplotypeScore=112.0879;InbreedingCoeff=0.3653;MQ=43.13;MQ0=59;MQRankSum=-6.271;QD=13.28;ReadPosRankSum=1.014;VQSLOD=2.4607;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:28:39.73:40,0,588	0/1:3,10:12:70.54:291,0,71	0/0:23,0:3:3.01:0,3,31	0/0:29,0:6:5.99:0,6,75	1/1:26,1:20:15.05:245,15,0	0/1:23,0:23:7.72:35,0,8	0/1:23,0:23:30.20:30,0,49	1/1:27,0:23:48.09:585,48,0	0/1:18,0:17:15.78:17,0,16	1/1:16,1:13:24.08:417,24,0	1/1:6,10:12:3.01:58,3,0	0/0:16,0:16:8.37:0,8,451	0/0:17,0:15:11.93:0,12,221	0/0:11,0:11:9.03:0,9,165	1/1:4,16:17:12.04:339,12,0	1/1:11,0:9:14.24:101,14,0	0/1:19,0:19:34.15:64,0,34	1/1:7,13:16:6.02:182,6,0	1/1:6,0:6:12.04:148,12,0	1/1:4,9:9:12.04:361,12,0	0/1:8,0:8:0:0,0,0	0/0:10,0:9:3.48:0,3,76	0/0:13,0:13:16.93:0,17,381	0/0:18,0:17:7.67:0,8,162	1/1:9,5:9:9.03:284,9,0	1/1:18,0:5:6.01:67,6,0	1/1:4,16:18:27.09:846,27,0	1/1:2,11:11:18.06:606,18,0
chr10	42607203	.	ACACACACAC	A	4025.29	PASS	AB=1.000;AC=33;AF=0.589;AN=56;BaseQRankSum=2.390;DP=493;FS=9.887;HRun=0;HaplotypeScore=106.0560;InbreedingCoeff=0.3625;MQ=43.20;MQ0=60;MQRankSum=-6.524;QD=11.37;ReadPosRankSum=1.361;VQSLOD=1.6843;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:28:40.50:41,0,419	0/1:13,0:12:49.70:194,0,50	0/0:23,0:3:3.01:0,3,31	0/0:30,0:6:5.99:0,6,70	1/1:27,0:20:15.05:211,15,0	0/1:22,0:22:44.45:78,0,44	0/1:24,0:24:37.71:90,0,38	1/1:26,0:22:48.15:606,48,0	0/1:18,0:17:5.57:40,0,6	1/1:7,10:13:24.08:412,24,0	1/1:16,0:12:3.01:38,3,0	0/0:16,0:16:8.23:0,8,271	0/0:17,0:15:11.92:0,12,123	0/0:11,0:11:9.02:0,9,90	1/1:20,0:17:12.04:234,12,0	1/1:10,1:9:15.05:233,15,0	0/1:19,0:19:37.82:48,0,38	1/1:20,0:16:6.02:136,6,0	1/1:7,0:6:12.04:150,12,0	1/1:13,0:9:12.04:245,12,0	0/1:8,0:8:0:0,0,0	0/0:10,0:9:3.01:0,3,52	0/0:14,0:14:13.34:0,13,228	0/0:18,0:17:7.65:0,8,88	1/1:13,0:8:9.03:205,9,0	1/1:18,0:5:6.01:68,6,0	1/1:20,0:18:27.09:587,27,0	1/1:13,0:11:18.06:412,18,0
chr10	42607205	.	ACACACAC	A	3688.24	PASS	AB=1.000;AC=33;AF=0.589;AN=56;BaseQRankSum=2.222;DP=483;FS=9.815;HRun=0;HaplotypeScore=95.3407;InbreedingCoeff=0.3235;MQ=42.56;MQ0=63;MQRankSum=-6.315;QD=10.63;ReadPosRankSum=1.289;VQSLOD=1.5225;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:28:43.22:43,0,275	0/1:13,0:11:32.54:152,0,33	0/0:20,0:2:3.01:0,3,31	0/0:31,0:5:5.99:0,6,71	1/1:26,0:19:15.05:197,15,0	0/1:22,0:22:44.45:84,0,44	0/1:23,0:23:19.66:100,0,20	1/1:25,0:21:48.15:608,48,0	0/1:17,0:16:3.19:44,0,3	1/1:17,0:13:24.08:352,24,0	1/1:16,0:12:3.01:38,3,0	0/0:16,0:16:2.34:0,2,106	0/0:17,0:15:8.50:0,8,26	0/0:11,0:11:6.11:0,6,18	1/1:20,0:16:12.04:187,12,0	1/1:4,7:9:15.05:354,15,0	0/1:19,0:19:33.98:34,0,38	1/1:20,0:16:6.02:108,6,0	1/1:6,0:5:12.04:151,12,0	1/1:13,0:9:12.04:202,12,0	0/1:8,0:7:0:0,0,0	0/0:10,0:9:3:0,3,29	0/0:13,0:13:7.65:0,8,108	0/0:18,0:17:5.85:0,6,17	1/1:13,0:8:9.03:163,9,0	1/1:15,0:2:6.01:67,6,0	1/1:20,0:18:27.09:476,27,0	1/1:13,0:11:18.06:328,18,0
chr10	42607206	.	CACACACCA	C	2357.58	PASS	AB=0.953;AC=28;AF=0.500;AN=56;BaseQRankSum=5.151;DP=483;FS=8.283;HRun=0;HaplotypeScore=102.5463;InbreedingCoeff=0.1337;MQ=42.38;MQ0=64;MQRankSum=-6.272;QD=7.10;ReadPosRankSum=3.749;VQSLOD=1.2087;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:28:99:159,0,261	0/1:13,0:11:59.56:141,0,60	0/0:19,0:1:3.01:0,3,69	0/0:31,0:5:12.04:0,12,210	1/1:26,0:19:7.63:63,8,0	0/1:2,19:21:36.85:170,0,37	1/1:6,16:23:3.47:241,3,0	0/0:26,0:21:10.38:0,10,106	1/1:3,14:16:9.82:142,10,0	1/1:17,0:13:7.40:149,7,0	0/1:16,0:12:0.28:0,0,68	0/1:16,0:16:5.45:5,0,224	0/0:17,0:15:16.94:0,17,125	0/1:11,0:11:2.78:3,0,71	1/1:20,0:16:11.52:140,12,0	1/1:11,0:9:15.02:156,15,0	0/1:20,0:19:40.37:40,0,72	0/1:20,0:16:29.08:95,0,29	0/0:6,0:5:0.87:0,1,2	1/1:12,0:9:11.83:166,12,0	0/0:9,0:8:0:0,0,0	0/0:10,0:9:3.01:0,3,41	0/1:13,0:13:21.15:21,0,217	0/0:18,0:17:10.20:0,10,70	0/1:13,0:8:47.90:139,0,48	0/0:15,0:2:2.50:0,2,9	1/1:20,0:18:2.30:384,2,0	1/1:13,0:11:18.06:306,18,0
chr10	42607210	.	CACCA	C	2616.87	PASS	AB=0.928;AC=36;AF=0.643;AN=56;BaseQRankSum=2.271;DP=476;FS=11.760;HRun=0;HaplotypeScore=87.0119;InbreedingCoeff=0.2614;MQ=42.40;MQ0=66;MQRankSum=-1.919;QD=7.39;ReadPosRankSum=5.985;VQSLOD=0.5660;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:27:38.51:216,0,39	0/1:13,0:11:10.91:66,0,11	0/0:19,0:2:5.96:0,6,51	0/0:31,0:7:18:0,18,192	1/1:26,0:19:2.90:17,3,0	0/1:21,0:21:36.85:73,0,37	1/1:23,0:23:14.79:129,15,0	0/0:24,0:19:2.96:0,3,20	1/1:17,0:16:6.38:73,6,0	1/1:18,0:13:7.41:76,7,0	0/0:15,0:11:2.91:0,3,25	0/1:4,12:17:74.04:373,0,74	1/1:3,12:13:11.91:242,12,0	1/1:2,8:10:12:206,12,0	1/1:21,0:16:8.04:58,8,0	1/1:11,0:9:14.98:125,15,0	0/1:18,0:17:13.45:13,0,38	1/1:18,0:14:6:53,6,0	0/0:6,0:6:4.61:0,5,20	1/1:12,0:9:9:79,9,0	0/0:10,0:9:0:0,0,0	1/1:4,6:8:2.79:32,3,0	1/1:12,1:13:32.75:334,33,0	1/1:3,15:17:9.03:186,9,0	0/1:12,0:7:25.22:66,0,25	0/0:16,0:3:5.47:0,5,25	1/1:19,0:17:24:209,24,0	1/1:13,0:11:18:157,18,0
chr10	42607211	.	AC	A	2030.22	PASS	AB=0.905;AC=41;AF=0.732;AN=56;BaseQRankSum=3.529;DP=473;FS=1.649;HRun=2;HaplotypeScore=79.6489;InbreedingCoeff=0.2478;MQ=42.42;MQ0=65;MQRankSum=-4.580;QD=5.13;ReadPosRankSum=4.777;VQSLOD=0.9030;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:25,4:27:23.21:100,0,23	0/1:13,0:11:24.04:28,0,24	0/0:19,0:2:6.02:0,6,70	0/0:29,1:7:12:0,12,140	1/1:24,2:19:15.05:190,15,0	0/1:21,0:21:2.70:3,0,46	1/1:20,3:23:4.63:31,5,0	1/1:4,20:19:51.16:648,51,0	0/1:16,1:16:2.62:3,0,3	1/1:18,0:13:23.43:226,23,0	1/1:14,0:10:3.01:38,3,0	0/1:17,0:17:33.12:33,0,64	1/1:15,0:13:7.31:21,7,0	1/1:10,0:10:5.97:18,6,0	1/1:21,0:16:11.62:102,12,0	1/1:10,1:9:14.51:89,15,0	0/0:17,0:17:5.37:0,5,47	1/1:17,1:14:5.48:24,5,0	0/1:2,5:6:19.53:157,0,20	1/1:12,0:9:11.40:77,11,0	1/1:1,8:8:2.84:38,3,0	0/0:10,0:8:2.37:0,2,8	0/1:12,1:13:4.77:5,0,33	1/1:18,0:17:5.96:19,6,0	1/1:10,2:7:8.34:38,8,0	1/1:1,15:3:8.99:84,9,0	1/1:17,2:17:25.48:142,25,0	1/1:12,1:11:16.79:77,17,0
chr10	42607213	.	CA	C	942.74	PASS	AB=0.987;AC=38;AF=0.679;AN=56;BaseQRankSum=6.178;DP=475;FS=1.723;HRun=1;HaplotypeScore=82.8312;InbreedingCoeff=0.2141;MQ=42.46;MQ0=66;MQRankSum=-5.280;QD=2.44;ReadPosRankSum=5.969;VQSLOD=-0.7089;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:26:10.80:78,0,11	0/1:14,0:12:9.85:10,0,27	0/0:20,0:2:6.02:0,6,84	0/0:29,0:6:12.04:0,12,169	1/1:27,0:20:14.88:105,15,0	0/1:21,0:21:10.09:10,0,40	1/1:22,1:23:4.01:15,4,0	1/1:24,0:19:26.58:269,27,0	0/1:17,0:16:0.68:6,0,1	1/1:18,0:13:20.86:120,21,0	1/1:14,0:10:2.97:20,3,0	0/1:15,1:17:32.60:33,0,55	1/1:14,1:13:9.25:32,9,0	1/1:9,1:10:10.45:47,10,0	0/1:22,0:17:11.53:40,0,12	1/1:11,0:9:10.89:38,11,0	0/0:16,0:15:5.99:0,6,45	1/1:18,0:14:4.07:13,4,0	0/1:9,0:8:32.14:61,0,32	1/1:12,0:9:9.44:39,9,0	1/1:9,0:8:2.84:14,3,0	0/0:10,0:8:2.92:0,3,20	0/0:13,0:13:21.37:0,21,115	1/1:18,0:17:7.34:28,7,0	0/1:12,0:7:9.88:10,0,16	1/1:16,0:3:3.78:14,4,0	1/1:19,0:17:20:72,20,0	1/1:13,0:11:12.22:38,12,0
chr10	42607578	.	TTGTGTGTGTGTGTGTGTGTGTG	T	8128.99	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=7.006;DP=556;FS=1.846;HRun=0;HaplotypeScore=303.3110;InbreedingCoeff=0.8667;MQ=66.88;MQ0=12;MQRankSum=-6.248;QD=62.05;ReadPosRankSum=0.443;VQSLOD=4.0227;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:31:44.14:0,44,1857	0/0:5,0:9:18.06:0,18,312	0/0:22,0:13:6.02:0,6,116	0/0:21,0:15:6.02:0,6,240	0/0:24,0:24:27.09:0,27,2186	0/0:11,0:13:15.01:0,15,311	0/0:16,0:17:21.07:0,21,788	0/0:12,0:15:18.06:0,18,551	0/0:8,0:15:24.08:0,24,766	1/1:12,15:26:42.11:1939,42,0	1/1:7,8:16:26.95:800,27,0	0/0:11,0:16:29.68:0,30,1367	0/0:22,0:22:48.16:0,48,3440	0/0:21,0:23:51.16:0,51,3998	1/1:8,17:25:48.16:2555,48,0	0/0:5,0:18:30.10:0,30,2404	1/1:13,0:17:3.01:154,3,0	1/1:8,0:7:3.01:63,3,0	0/0:17,0:22:36.12:0,36,1113	0/0:6,0:9:17.27:0,17,407	0/0:37,0:37:33.05:0,33,792	0/0:17,0:17:33.11:0,33,2362	0/0:16,0:16:27.08:0,27,2121	0/0:28,0:27:63.22:0,63,5094	1/1:4,3:7:6.02:327,6,0	1/1:15,13:29:42.14:2291,42,0	0/0:18,0:29:46.81:0,47,1333	0/0:9,0:15:21.07:0,21,838
chr10	42608719	.	T	TATAC	9845.24	PASS	AB=1.000;AC=31;AF=0.554;AN=56;BaseQRankSum=3.091;DP=808;FS=0.000;HRun=0;HaplotypeScore=220.1278;InbreedingCoeff=0.8999;MQ=56.64;MQ0=5;MQRankSum=-2.749;QD=22.95;ReadPosRankSum=1.126;VQSLOD=4.1078;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:31,0:31:99:181,0,343	1/1:11,0:11:3.01:32,3,0	0/0:49,0:29:49.56:0,50,938	0/0:35,0:24:39.12:0,39,644	0/0:41,0:41:38.10:0,38,478	0/0:23,0:23:36.88:0,37,804	0/0:12,0:12:30.09:0,30,458	1/1:31,0:29:54.12:648,54,0	0/0:30,0:30:72.18:0,72,1135	1/1:15,28:43:99:2105,108,0	1/1:6,18:24:29.95:337,30,0	0/0:27,0:27:63.20:0,63,1045	0/0:41,0:41:99:0,99,1496	0/0:36,0:36:99:0,105,1710	1/1:8,26:34:29.57:639,30,0	1/1:29,0:29:26.66:352,27,0	1/1:15,1:17:18.02:230,18,0	1/1:16,2:18:36.09:563,36,0	1/1:21,0:21:26.40:298,26,0	1/1:30,0:30:47.82:710,48,0	1/1:23,0:23:29.88:343,30,0	0/0:25,0:25:39.74:0,40,392	0/0:30,0:30:72.05:0,72,1188	0/0:29,0:29:69.11:0,69,1093	1/1:9,31:40:32.61:637,33,0	1/1:8,24:34:75.23:1611,75,0	1/1:32,0:32:66.18:966,66,0	1/1:10,0:10:15.04:194,15,0
chr10	42608727	.	CATAA	C	7197.82	PASS	AB=0.898;AC=29;AF=0.518;AN=56;BaseQRankSum=-0.381;DP=743;FS=0.000;HRun=0;HaplotypeScore=220.2181;InbreedingCoeff=0.7016;MQ=53.54;MQ0=7;MQRankSum=-4.375;QD=19.35;ReadPosRankSum=0.932;VQSLOD=4.3385;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:31:76.12:0,76,888	1/1:1,10:11:1.88:55,2,0	0/0:45,0:28:56.64:0,57,1375	0/0:29,0:19:20.34:0,20,1029	0/0:37,0:37:50.32:0,50,512	0/0:21,0:21:58.88:0,59,1126	0/0:12,0:12:36.08:0,36,596	0/1:21,10:29:42.63:896,0,43	0/0:27,0:27:75.98:0,76,1591	1/1:32,6:38:5.17:1094,5,0	1/1:19,2:21:27.33:383,27,0	0/0:26,0:26:69.18:0,69,1401	0/0:42,0:42:97.01:0,97,1650	0/0:40,0:40:99:0,111,2248	1/1:26,3:29:5.26:178,5,0	1/1:0,23:23:18.68:365,19,0	1/1:2,13:15:10.04:248,10,0	1/1:11,4:15:27.43:433,27,0	1/1:12,4:16:6.93:308,7,0	1/1:22,3:25:39.64:656,40,0	1/1:19,2:21:26.08:356,26,0	0/1:23,0:23:98.31:98,0,508	0/0:30,0:30:78.25:0,78,1627	0/0:30,0:30:78.13:0,78,1720	1/1:33,3:36:10.59:222,11,0	0/1:28,2:30:10.74:822,0,11	1/1:25,4:28:67.74:942,68,0	1/1:9,0:8:15:142,15,0
chr10	42608735	.	CATAA	C	1323.64	PASS	AB=0.997;AC=22;AF=0.393;AN=56;BaseQRankSum=-2.834;DP=714;FS=4.868;HRun=0;HaplotypeScore=242.9347;InbreedingCoeff=-0.2195;MQ=51.22;MQ0=7;MQRankSum=0.525;QD=2.80;ReadPosRankSum=-4.886;VQSLOD=1.3493;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:20,11:29:23.02:222,23,0	1/1:10,0:10:0.67:3,1,0	0/0:47,0:29:65.23:0,65,1013	0/0:24,0:17:47.99:0,48,652	0/1:35,0:35:0.12:146,0,0	0/1:16,1:17:28.19:28,0,493	0/1:14,0:14:24.52:25,0,216	0/1:39,0:37:37.60:222,0,38	0/1:25,0:25:30.88:31,0,778	0/1:36,0:36:99:149,0,466	1/1:18,0:18:0.27:3,0,0	0/0:26,0:26:4.46:0,4,622	0/1:39,0:39:99:192,0,600	0/1:41,0:41:99:101,0,997	0/0:28,0:28:22.22:0,22,284	0/0:23,0:23:1.38:0,1,8	0/1:15,0:15:3.28:3,0,6	0/1:12,0:12:32.63:33,0,114	0/1:17,0:17:18.65:19,0,23	0/0:25,0:25:3.28:0,3,10	0/1:16,0:16:0.82:1,0,2	0/1:20,0:20:99:133,0,206	0/1:32,0:32:63.64:64,0,866	0/0:31,0:31:65.63:0,66,975	0/0:28,0:28:22.44:0,22,246	0/1:28,0:28:53.95:54,0,382	0/1:28,0:27:21.19:46,0,21	0/0:9,0:8:6.98:0,7,31
chr10	42608765	.	TATAC	T	2656.10	PASS	AB=0.986;AC=27;AF=0.482;AN=56;BaseQRankSum=11.760;DP=658;FS=27.591;HRun=0;HaplotypeScore=268.0079;InbreedingCoeff=0.3019;MQ=45.51;MQ0=8;MQRankSum=-9.750;QD=6.76;ReadPosRankSum=-8.373;VQSLOD=-0.2808;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:30:99:155,0,159	1/1:10,0:10:8.58:86,9,0	0/0:24,0:12:20.93:0,21,399	0/0:10,0:6:18:0,18,251	1/1:33,0:33:12.84:178,13,0	0/1:20,0:20:59.39:59,0,494	0/0:12,0:12:15.05:0,15,250	0/0:38,0:35:40.74:0,41,757	0/1:35,0:35:99:245,0,763	0/1:29,1:30:99:257,0,618	1/1:14,0:14:11.28:77,11,0	0/0:25,0:25:45.71:0,46,565	0/0:32,0:32:39.59:0,40,614	0/0:36,0:35:34.17:0,34,901	0/1:29,2:31:99:183,0,242	1/1:21,0:21:5.76:68,6,0	1/1:18,0:18:13.36:125,13,0	0/1:11,0:11:47.85:48,0,158	0/1:20,0:20:99:206,0,150	1/1:12,8:20:14.60:142,15,0	1/1:16,1:17:7.98:91,8,0	0/0:21,0:21:21.49:0,21,440	0/0:29,0:28:54.60:0,55,732	0/0:37,0:38:59.06:0,59,749	0/1:24,1:26:99:156,0,206	0/1:21,0:21:95.53:96,0,461	1/1:18,5:22:46.99:540,47,0	1/1:10,0:10:18.64:140,19,0
chr10	42608767	.	TAC	T	175.36	PASS	AB=0.970;AC=13;AF=0.232;AN=56;BaseQRankSum=4.463;DP=633;FS=8.196;HRun=0;HaplotypeScore=256.8809;InbreedingCoeff=0.0240;MQ=45.38;MQ0=7;MQRankSum=-3.695;QD=0.77;ReadPosRankSum=-6.528;VQSLOD=-0.1003;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:29:22.21:0,22,393	1/1:11,0:11:3.94:26,4,0	0/0:19,0:8:21:0,21,306	0/0:9,0:5:12.03:0,12,154	0/1:32,0:32:3.95:4,0,24	0/0:19,0:19:40.03:0,40,492	0/0:12,0:12:15.05:0,15,227	0/1:27,10:35:99:183,0,738	0/0:34,0:34:74.36:0,74,836	0/0:28,0:28:57.80:0,58,701	1/1:14,0:14:1.71:12,2,0	0/0:26,0:26:26.83:0,27,451	0/0:31,0:31:38.10:0,38,485	0/0:35,0:34:53.06:0,53,847	0/1:31,0:31:32.74:33,0,198	0/0:18,0:18:4.74:0,5,17	0/1:17,0:17:6.55:7,0,19	0/1:12,0:12:0.02:0,0,185	0/0:20,0:20:11.70:0,12,252	0/0:20,0:20:2.08:0,2,23	0/1:15,1:16:11.78:12,0,18	0/0:19,0:19:20.77:0,21,358	0/0:28,0:27:38.86:0,39,550	0/0:37,0:37:33.05:0,33,617	0/1:26,0:26:3.62:4,0,207	0/0:19,0:19:31.48:0,31,456	0/1:20,0:20:20.29:20,0,57	0/1:12,0:11:10.26:10,0,72
chr10	42608769	.	CACAT	C	2307.26	PASS	AB=1.000;AC=16;AF=0.308;AN=52;BaseQRankSum=-7.283;DP=646;FS=15.438;HRun=0;HaplotypeScore=273.1130;InbreedingCoeff=0.5544;MQ=44.90;MQ0=7;MQRankSum=6.538;QD=9.42;ReadPosRankSum=7.630;VQSLOD=1.1185;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:9.61:0,10,75	0/0:11,0:11:5.25:0,5,41	./.	./.	0/0:32,0:32:6.47:0,6,53	0/1:19,0:19:0.08:1,0,0	0/0:16,0:16:3.01:0,3,37	0/0:44,0:42:38.13:0,38,417	0/0:36,0:36:3.55:0,4,21	0/0:27,0:27:13.37:0,13,97	0/0:15,0:15:10.07:0,10,57	1/1:13,13:26:27.09:417,27,0	1/1:14,0:30:2.98:21,3,0	1/1:21,14:34:30.10:463,30,0	0/0:30,0:30:22.09:0,22,110	0/0:18,0:19:3.89:0,4,36	0/0:17,0:17:0.82:0,1,2	0/1:13,0:13:1.70:2,0,90	0/0:7,0:21:9.65:0,10,56	0/1:20,0:20:0:0,0,0	0/0:17,0:18:0:0,0,2	1/1:9,10:19:30.10:463,30,0	1/1:15,12:26:23.91:370,24,0	1/1:19,17:36:44.73:694,45,0	0/0:26,0:26:30.95:0,31,194	0/0:19,0:19:11.32:0,11,74	0/1:20,0:20:36.55:37,0,39	0/0:11,0:11:4.17:0,4,25
chr10	42608801	.	T	TATAC	6541.38	PASS	AB=0.962;AC=28;AF=0.500;AN=56;BaseQRankSum=2.870;DP=493;FS=0.000;HRun=0;HaplotypeScore=181.9883;InbreedingCoeff=0.7881;MQ=46.92;MQ0=7;MQRankSum=-6.675;QD=28.44;ReadPosRankSum=1.879;VQSLOD=4.6892;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:31:50.89:0,51,718	1/1:10,0:10:12.04:231,12,0	0/0:9,0:3:3.01:0,3,45	0/0:8,0:3:6.02:0,6,114	0/0:28,0:28:20.97:0,21,319	0/0:10,0:10:21.07:0,21,296	0/0:10,0:10:9.03:0,9,133	0/1:36,0:35:99:686,0,609	0/0:24,0:24:45.14:0,45,575	1/1:13,2:15:45.15:885,45,0	1/1:7,1:8:12.04:198,12,0	0/0:22,0:22:48.16:0,48,666	0/0:23,0:23:18.05:0,18,260	0/0:26,0:25:50.86:0,51,612	1/1:9,3:12:30.10:573,30,0	1/1:11,0:11:12.49:142,12,0	1/1:18,0:18:15.97:347,16,0	0/1:11,1:12:13.40:279,0,13	1/1:18,0:15:40.23:551,40,0	1/1:13,0:13:9.03:155,9,0	1/1:21,0:21:17.42:251,17,0	0/0:18,0:18:48.15:0,48,655	0/0:16,0:16:35.91:0,36,434	0/0:36,0:36:90.12:0,90,1194	1/1:15,1:16:36.12:646,36,0	1/1:14,0:14:36.10:545,36,0	1/1:18,0:18:44.60:710,45,0	1/1:8,0:7:21.07:343,21,0
chr10	42609780	.	C	CACACACACAG	8039.26	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=-9.023;DP=1051;FS=5.537;HRun=0;HaplotypeScore=345.8565;InbreedingCoeff=0.8868;MQ=60.35;MQ0=13;MQRankSum=-12.099;QD=30.34;ReadPosRankSum=-5.354;VQSLOD=2.7872;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:96.23:0,96,2528	0/0:9,0:9:12.03:0,12,134	0/0:76,0:48:52.97:0,53,880	0/0:90,0:57:65.64:0,66,1283	0/0:17,0:17:21.06:0,21,234	0/0:22,0:22:30.07:0,30,558	0/1:39,0:39:7.11:7,0,971	0/0:39,0:39:63.21:0,63,744	0/0:45,0:45:99:0,99,1132	0/0:36,0:36:77.84:0,78,1177	0/0:26,0:25:45.13:0,45,713	1/1:13,31:44:42.14:2113,42,0	1/1:14,23:41:36.46:1402,36,0	1/1:20,24:45:48.16:2238,48,0	0/0:48,0:47:96.33:0,96,1532	0/0:41,0:40:72.19:0,72,851	0/0:30,0:29:57.16:0,57,693	0/0:37,0:36:23.48:0,23,866	0/0:22,0:21:32.47:0,32,370	0/0:31,0:31:57.09:0,57,597	0/0:62,0:62:99:0,117,1428	1/1:11,16:27:21.07:1058,21,0	1/1:8,15:24:14.96:752,15,0	1/1:22,20:44:11.59:469,12,0	0/0:26,0:26:57.19:0,57,902	0/0:40,0:40:81.67:0,82,1324	0/0:38,0:38:75.08:0,75,824	0/0:6,0:6:9.03:0,9,136
chr10	42609790	.	G	GAC	15032.60	PASS	AB=0.849;AC=40;AF=0.714;AN=56;BaseQRankSum=-2.744;DP=1032;FS=7.514;HRun=0;HaplotypeScore=194.1291;InbreedingCoeff=0.1142;MQ=60.91;MQ0=15;MQRankSum=-0.123;QD=18.27;ReadPosRankSum=7.915;VQSLOD=3.5717;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:49:76:0,76,1095	1/1:3,4:7:12.04:194,12,0	0/0:74,0:47:67.08:0,67,711	0/0:84,0:53:43.39:0,43,639	1/1:6,14:21:1.28:316,1,0	0/1:12,9:21:99:215,0,118	1/1:8,33:41:11.49:1186,11,0	1/1:14,26:43:72.95:1204,73,0	1/1:8,37:45:56.92:1414,57,0	1/1:33,0:33:87.18:926,87,0	1/1:28,0:27:8.78:425,9,0	0/1:43,0:43:87.89:133,0,88	0/1:36,0:36:81:91,0,81	0/1:43,0:43:99:132,0,125	1/1:46,0:45:96.21:1068,96,0	1/1:7,27:34:32.84:1029,33,0	1/1:4,26:29:21.27:835,21,0	1/1:33,0:31:65.67:722,66,0	0/1:10,11:19:0.28:483,0,0	1/1:8,20:29:45.15:726,45,0	0/1:20,44:65:42.95:1334,0,43	0/1:27,0:27:44.52:45,0,104	0/1:26,0:26:26.71:27,0,90	0/1:43,0:42:27.77:28,0,38	1/1:27,0:27:57.16:652,57,0	1/1:40,0:40:96.19:999,96,0	1/1:12,22:34:17.81:764,18,0	0/1:1,5:6:26.82:88,0,27
chr10	42609792	.	C	CAT	12693.57	PASS	AB=1.000;AC=25;AF=0.446;AN=56;BaseQRankSum=-1.463;DP=1021;FS=0.911;HRun=0;HaplotypeScore=200.2294;InbreedingCoeff=0.0232;MQ=61.21;MQ0=15;MQRankSum=5.144;QD=21.12;ReadPosRankSum=12.993;VQSLOD=3.4557;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,120,1597	0/1:6,0:6:30.92:84,0,31	0/0:74,0:47:99:0,120,1501	0/0:83,0:52:99:0,116,1415	0/1:21,0:21:82.79:144,0,83	0/1:20,0:20:80.07:80,0,244	0/1:42,0:42:94.76:517,0,95	0/1:42,0:42:99:394,0,162	0/1:44,0:44:17.94:630,0,18	1/1:2,33:36:99:1725,99,0	1/1:1,27:27:17.22:782,17,0	0/0:43,0:44:24.59:0,25,312	0/0:33,0:34:10.94:0,11,247	0/0:42,0:43:33.13:0,33,365	1/1:4,41:44:96.27:1850,96,0	0/1:36,0:35:88.86:432,0,89	0/1:30,0:29:26.58:377,0,27	1/1:5,27:32:55.89:1203,56,0	0/1:18,0:16:75.03:191,0,75	0/1:30,0:30:59.93:303,0,60	0/1:64,0:64:99:570,0,318	0/0:24,0:24:21.94:0,22,255	0/0:24,0:25:25.79:0,26,244	0/0:43,0:42:0.25:0,0,159	1/1:1,25:28:57.20:1093,57,0	1/1:0,38:38:99:1966,114,0	0/1:33,0:33:99:313,0,179	0/1:6,0:6:36.80:40,0,37
chr10	42610515	.	AGCAT	A	1324.03	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.396;DP=716;FS=3.685;HRun=0;HaplotypeScore=116.1668;InbreedingCoeff=0.9959;MQ=81.73;MQ0=0;MQRankSum=-2.561;QD=42.71;ReadPosRankSum=1.124;VQSLOD=4.1998;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,123,3251	0/0:14,0:14:39.07:0,39,937	0/0:29,0:29:77.05:0,77,1931	0/0:20,0:18:48.16:0,48,1210	0/0:22,0:22:63.22:0,63,1724	0/0:20,0:20:60.19:0,60,1539	0/0:41,0:41:99:0,117,3188	0/0:24,0:24:72.25:0,72,1943	0/0:22,0:22:66.23:0,66,1802	0/0:31,0:31:90.30:0,90,2410	0/0:20,0:20:54.19:0,54,1471	0/0:29,0:29:84.29:0,84,2267	0/0:27,0:27:81.26:0,81,2119	0/0:24,0:24:69.24:0,69,1847	0/0:25,0:25:75.24:0,75,1990	0/0:18,0:18:51.18:0,51,1390	1/1:1,29:31:78.21:1419,78,0	0/0:23,0:22:69.21:0,69,1801	0/0:24,0:24:72.23:0,72,1807	0/0:24,0:24:69.24:0,69,1890	0/0:38,0:38:99:0,111,2845	0/0:24,0:24:72.23:0,72,1914	0/0:23,0:23:69.24:0,69,1890	0/0:48,0:48:99:0,141,3829	0/0:22,0:22:66.23:0,66,1808	0/0:20,0:20:60.21:0,60,1646	0/0:22,0:22:66.23:0,66,1786	0/0:9,0:9:21.07:0,21,574
chr10	42611183	.	A	AT	222.40	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-2.516;DP=489;FS=8.580;HRun=1;HaplotypeScore=78.0179;InbreedingCoeff=0.9639;MQ=83.55;MQ0=0;MQRankSum=-1.187;QD=27.80;ReadPosRankSum=-0.250;VQSLOD=2.5073;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:81.26:0,81,1050	1/1:0,8:8:21.07:315,21,0	0/0:16,0:16:42.05:0,42,496	0/0:16,0:16:45.08:0,45,534	0/0:19,0:19:57.19:0,57,739	0/0:20,0:20:60.20:0,60,778	0/0:14,0:14:42.11:0,42,517	0/0:34,0:34:96.14:0,96,1139	0/0:17,0:17:51.17:0,51,662	0/0:17,0:17:51.17:0,51,680	0/0:24,0:24:69.22:0,69,888	0/0:19,0:19:51.17:0,51,662	0/0:14,0:14:42.14:0,42,545	0/0:14,0:14:36.10:0,36,452	0/0:12,0:12:36.12:0,36,467	0/0:15,0:15:45.15:0,45,583	0/0:17,0:17:48.10:0,48,590	0/0:15,0:15:42.06:0,42,496	0/0:18,0:18:54.08:0,54,632	0/0:22,0:22:60.18:0,60,764	0/0:5,0:5:12.04:0,12,156	0/0:21,0:21:60.19:0,60,775	0/0:21,0:21:54.18:0,54,700	0/0:14,0:14:42.13:0,42,532	0/0:22,0:22:57.19:0,57,740	0/0:21,0:21:63.18:0,63,804	0/0:17,0:17:51.17:0,51,659	0/0:8,0:8:24.08:0,24,311
chr10	42611214	.	C	CAAAAA	11134.59	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-5.511;DP=539;FS=0.372;HRun=9;HaplotypeScore=122.4843;InbreedingCoeff=0.9718;MQ=77.13;MQ0=0;MQRankSum=-5.872;QD=33.84;ReadPosRankSum=-2.556;VQSLOD=2.1012;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,0:34:64.28:267,64,0	1/1:2,0:3:9.03:159,9,0	0/0:20,0:19:27.51:0,28,658	0/0:18,0:17:29.75:0,30,414	1/1:6,0:25:54.05:543,54,0	0/0:18,0:18:51.15:0,51,820	0/0:16,0:16:42.12:0,42,671	1/1:14,14:32:71.03:1471,71,0	0/0:17,0:17:39.04:0,39,642	1/1:4,0:18:41.46:599,41,0	1/1:1,1:26:71.74:1056,72,0	0/0:4,0:19:32.88:0,33,161	0/0:3,0:16:9.41:0,9,95	0/0:4,0:12:20.39:0,20,114	1/1:3,0:12:15.05:258,15,0	1/1:1,1:15:33.11:591,33,0	1/1:2,0:18:44.14:429,44,0	1/1:4,0:20:45.15:723,45,0	1/1:8,10:23:57.16:1235,57,0	1/1:6,12:22:54.18:1308,54,0	1/1:2,4:9:12:262,12,0	0/0:6,0:27:49.70:0,50,184	0/0:7,0:30:49.27:0,49,224	0/0:3,0:16:29.89:0,30,111	1/1:1,0:19:36.08:576,36,0	1/1:9,0:24:42.09:626,42,0	1/1:5,5:23:36.46:767,36,0	1/1:2,3:5:12.04:264,12,0
chr10	42612061	.	TCACACACACACA	T	2274.24	PASS	AB=0.727;AC=13;AF=0.250;AN=52;BaseQRankSum=4.760;DP=564;FS=8.559;HRun=0;HaplotypeScore=196.6021;InbreedingCoeff=0.7989;MQ=65.77;MQ0=11;MQRankSum=-5.543;QD=15.37;ReadPosRankSum=-2.564;VQSLOD=1.0775;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:33:24.08:0,24,893	0/0:11,0:10:12.04:0,12,641	./.	./.	0/0:13,0:16:12.04:0,12,238	0/0:12,0:13:18.06:0,18,708	0/0:26,0:30:28.34:0,28,902	0/0:17,0:17:4.26:0,4,53	0/0:11,0:13:14.78:0,15,547	1/1:19,0:19:6.94:132,7,0	1/1:10,5:15:7.24:287,7,0	0/0:12,0:17:24.08:0,24,513	0/0:7,0:9:18.06:0,18,453	0/0:9,0:10:18.06:0,18,477	1/1:9,8:17:20.96:659,21,0	0/0:25,0:25:17.87:0,18,763	0/1:15,0:23:0.41:0,0,32	1/1:24,5:29:3.01:103,3,0	0/0:16,0:16:15.05:0,15,365	0/0:12,0:18:21.06:0,21,319	0/0:29,0:28:27.08:0,27,545	0/0:21,0:21:21.07:0,21,582	0/0:18,0:18:21.07:0,21,630	0/0:19,0:24:20.87:0,21,550	1/1:10,8:18:24.08:774,24,0	1/1:16,9:26:12.35:483,12,0	0/0:17,0:21:18.95:0,19,441	0/0:7,0:12:10.45:0,10,175
chr10	42612524	.	GGA	G	1199.07	PASS	AB=0.991;AC=25;AF=0.446;AN=56;BaseQRankSum=12.183;DP=540;FS=9.345;HRun=0;HaplotypeScore=100.7295;InbreedingCoeff=-0.2700;MQ=80.49;MQ0=2;MQRankSum=-2.946;QD=2.92;ReadPosRankSum=10.411;VQSLOD=-0.4645;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:72:0,72,850	1/1:5,0:5:5.06:21,5,0	0/0:31,0:23:22.70:0,23,398	0/1:18,0:17:19.31:19,0,117	0/0:8,0:8:14.83:0,15,116	0/0:10,0:10:26.24:0,26,291	0/0:24,0:24:49.60:0,50,742	0/1:13,0:13:12.22:12,0,64	0/0:13,0:13:35.21:0,35,439	0/1:10,0:10:10.39:10,0,87	0/1:18,1:19:40.41:50,0,40	0/1:22,0:22:17.19:67,0,17	0/1:15,1:16:43.50:62,0,43	1/1:27,0:26:5.27:146,5,0	0/1:26,0:26:20.55:99,0,21	0/0:19,0:19:45.91:0,46,260	1/1:35,0:35:6.31:158,6,0	0/1:23,0:23:50.44:66,0,50	0/1:18,0:18:26.99:27,0,70	0/1:20,1:21:31.68:96,0,32	0/1:25,0:25:13.93:87,0,14	1/1:14,1:15:30.06:101,30,0	0/1:11,0:11:25.16:27,0,25	0/1:24,0:23:66.49:72,0,66	0/1:16,0:16:38.94:72,0,39	0/1:30,0:30:52.58:68,0,53	0/1:24,0:23:74.35:74,0,93	0/1:11,0:11:26.53:35,0,27
chr10	42612526	.	AGG	A	8883.29	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-1.113;DP=542;FS=21.211;HRun=11;HaplotypeScore=76.9745;InbreedingCoeff=0.9500;MQ=79.83;MQ0=2;MQRankSum=-1.610;QD=23.19;ReadPosRankSum=6.915;VQSLOD=2.3048;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:45.15:0,45,676	1/1:1,4:5:6.01:64,6,0	0/0:31,0:23:25.91:0,26,413	0/0:18,0:16:22.97:0,23,248	0/0:7,0:12:11.56:0,12,98	0/0:12,0:13:23.47:0,23,262	0/0:22,0:24:51.61:0,52,630	1/1:5,8:13:4.29:196,4,0	0/0:16,0:16:36.09:0,36,479	1/1:3,7:10:18.01:191,18,0	1/1:6,12:18:39.09:414,39,0	1/1:3,18:21:48.11:511,48,0	1/1:4,11:15:27:275,27,0	1/1:2,26:27:60.13:639,60,0	1/1:2,22:24:60.14:639,60,0	0/0:3,0:18:35.44:0,35,136	1/1:3,31:34:84.20:894,84,0	1/1:3,18:22:50.84:523,51,0	1/1:4,12:16:36.08:383,36,0	1/1:4,18:23:47.81:488,48,0	1/1:3,21:24:57.14:605,57,0	1/1:1,14:15:39.10:415,39,0	1/1:2,9:11:21.05:224,21,0	1/1:5,19:24:51.12:543,51,0	1/1:3,12:15:36.08:382,36,0	1/1:4,27:31:78.14:818,78,0	1/1:7,17:23:42.07:445,42,0	1/1:2,7:10:23.79:235,24,0
chr10	42613292	.	C	CA	17190.68	PASS	AC=46;AF=0.852;AN=54;BaseQRankSum=-10.359;DP=508;FS=5.189;HRun=0;HaplotypeScore=53.8011;InbreedingCoeff=0.9639;MQ=70.68;MQ0=0;MQRankSum=-2.746;QD=42.87;ReadPosRankSum=2.005;VQSLOD=5.4091;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,27:27:75.26:1198,75,0	1/1:0,3:3:9.03:144,9,0	./.	0/0:16,0:15:26.24:0,26,364	1/1:0,16:16:42.14:672,42,0	0/0:20,0:20:57.16:0,57,760	0/0:40,0:40:99:0,117,1615	1/1:1,21:22:63.17:956,63,0	0/0:31,0:31:87.25:0,87,1195	1/1:0,12:12:36.12:573,36,0	1/1:0,10:10:24.08:384,24,0	1/1:0,18:18:54.18:863,54,0	1/1:0,18:18:54.18:856,54,0	1/1:0,14:14:30.09:480,30,0	1/1:1,16:17:33.11:527,33,0	1/1:0,4:4:12.04:192,12,0	1/1:2,41:43:99:1726,108,0	1/1:0,21:21:54.18:863,54,0	1/1:0,19:19:57.19:904,57,0	1/1:0,5:5:15.05:240,15,0	1/1:0,55:55:99:2396,151,0	1/1:0,16:16:48.16:766,48,0	1/1:0,9:9:23.85:383,24,0	1/1:0,30:30:75.26:1198,75,0	1/1:0,10:10:27.09:432,27,0	1/1:0,18:18:54.18:864,54,0	1/1:1,6:7:15.05:240,15,0	1/1:0,7:7:21.07:336,21,0
chr10	42613686	.	C	CT	9132.05	PASS	AB=0.722;AC=41;AF=0.732;AN=56;BaseQRankSum=-10.553;DP=570;FS=7.445;HRun=8;HaplotypeScore=59.9079;InbreedingCoeff=0.6429;MQ=74.97;MQ0=7;MQRankSum=-0.338;QD=19.27;ReadPosRankSum=0.516;VQSLOD=4.4755;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:93.03:0,93,846	1/1:0,4:4:9.03:104,9,0	0/1:55,1:20:0.23:0,0,212	0/1:52,0:32:6.15:6,0,175	0/0:19,0:19:47.77:0,48,423	0/0:10,0:10:30:0,30,269	0/0:23,0:23:63.01:0,63,569	1/1:6,20:26:54.09:575,54,0	0/0:12,0:12:30:0,30,270	1/1:3,25:28:75.22:864,75,0	0/1:2,19:21:0.76:482,0,1	1/1:0,17:17:36.11:415,36,0	1/1:1,17:19:51.15:581,51,0	1/1:2,14:16:30.09:346,30,0	1/1:1,16:17:42.12:485,42,0	1/1:0,10:10:24.07:277,24,0	0/1:3,10:13:24.79:247,0,25	0/1:4,16:20:15.70:341,0,16	1/1:2,18:20:51.11:552,51,0	1/1:1,12:14:38.86:397,39,0	1/1:5,9:15:20.89:222,21,0	1/1:3,18:21:45.08:574,45,0	1/1:1,14:15:33.10:380,33,0	1/1:1,18:19:45.13:519,45,0	1/1:4,11:15:27.08:309,27,0	1/1:2,22:24:63.13:694,63,0	1/1:2,20:22:48.14:554,48,0	1/1:0,8:8:18.05:208,18,0
chr10	42614266	.	TC	T	14907.79	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=7.895;DP=671;FS=19.180;HRun=6;HaplotypeScore=73.5392;InbreedingCoeff=0.9994;MQ=88.58;MQ0=0;MQRankSum=-7.526;QD=27.92;ReadPosRankSum=4.471;VQSLOD=3.2891;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,27:28:72.18:772,72,0	1/1:3,9:12:27.06:290,27,0	0/0:26,0:26:75.21:0,75,921	0/0:26,0:26:66.17:0,66,842	1/1:1,18:19:48.12:515,48,0	0/0:30,0:30:90.29:0,90,1184	0/0:31,0:31:93.30:0,93,1223	1/1:5,27:32:81.15:841,81,0	0/0:24,0:24:63.20:0,63,809	1/1:2,23:25:69.15:732,69,0	1/1:0,22:22:63.16:675,63,0	1/1:2,29:31:81.20:870,81,0	1/1:0,19:19:54.14:580,54,0	1/1:2,19:21:60.13:635,60,0	1/1:2,30:32:90.23:967,90,0	1/1:1,20:21:60.15:645,60,0	1/1:3,18:21:57.12:603,57,0	1/1:2,18:20:57.14:610,57,0	1/1:4,14:17:39.09:418,39,0	1/1:0,12:12:30.07:322,30,0	1/1:3,42:45:99:1116,105,0	1/1:1,20:21:54.14:580,54,0	1/1:1,14:15:42.11:451,42,0	1/1:1,40:41:93.23:996,93,0	1/1:0,18:18:48.12:516,48,0	1/1:3,30:33:87.22:935,87,0	1/1:1,17:18:51.13:548,51,0	1/1:1,9:10:27.07:290,27,0
chr10	42614343	.	C	CCA	2746.14	PASS	AB=0.944;AC=41;AF=0.759;AN=54;BaseQRankSum=1.421;DP=601;FS=14.578;HRun=0;HaplotypeScore=157.2377;InbreedingCoeff=0.4592;MQ=61.05;MQ0=8;MQRankSum=-2.309;QD=5.81;ReadPosRankSum=0.979;VQSLOD=2.7043;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:14:0.30:0,0,1	1/1:8,0:8:5.99:49,6,0	0/0:30,0:21:3:0,3,25	0/1:40,0:26:0:0,0,0	1/1:25,0:25:9.02:105,9,0	0/0:11,0:11:5.93:0,6,58	0/0:32,0:37:43.99:0,44,400	1/1:20,0:20:14.94:131,15,0	0/0:15,0:16:26.90:0,27,278	1/1:17,1:17:10.34:204,10,0	1/1:10,3:13:8.86:127,9,0	1/1:22,0:24:17.96:151,18,0	1/1:26,0:24:26.92:241,27,0	1/1:18,0:18:9.02:112,9,0	1/1:16,8:26:33.55:448,34,0	1/1:14,0:15:5.85:56,6,0	1/1:26,0:27:23.91:214,24,0	0/1:11,1:12:18.27:106,0,18	1/1:17,0:15:3:28,3,0	1/1:10,0:10:5.02:28,5,0	1/1:29,0:26:5.02:86,5,0	./.	1/1:21,0:20:3.01:44,3,0	1/1:43,0:46:14.71:141,15,0	0/1:9,1:10:21.02:102,0,21	1/1:27,2:29:23.33:259,23,0	1/1:24,1:25:25.88:227,26,0	1/1:8,0:7:3.48:39,3,0
chr10	42614397	.	G	GCC	3063.52	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=7.377;DP=455;FS=0.508;HRun=8;HaplotypeScore=118.6451;InbreedingCoeff=0.9021;MQ=78.49;MQ0=1;MQRankSum=-6.665;QD=8.68;ReadPosRankSum=1.333;VQSLOD=0.3831;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,10:17:28.94:397,29,0	1/1:6,0:6:11.12:41,11,0	0/0:27,0:27:62.98:0,63,633	0/0:14,0:9:12.49:0,12,113	1/1:3,6:11:16.69:207,17,0	0/0:18,0:18:45.11:0,45,501	0/0:26,0:26:57.13:0,57,635	1/1:22,0:22:11.03:38,11,0	0/0:16,0:16:36.07:0,36,401	1/1:18,0:18:18.88:82,19,0	1/1:8,0:8:16.94:82,17,0	1/1:25,0:24:41.21:220,41,0	1/1:13,0:12:24.78:142,25,0	1/1:18,0:18:33.62:168,34,0	1/1:25,0:25:39.48:180,39,0	1/1:21,0:21:53.76:494,54,0	1/1:25,0:24:55.69:303,56,0	1/1:15,0:15:29.52:115,30,0	1/1:16,0:16:18.03:58,18,0	1/1:8,0:8:12.88:53,13,0	1/1:24,0:24:35.26:147,35,0	1/1:12,0:12:18.21:86,18,0	1/1:9,0:9:10.45:41,10,0	1/1:26,0:26:33.80:194,34,0	1/1:9,0:9:13.15:77,13,0	1/1:14,0:14:13.08:47,13,0	1/1:9,0:9:11.08:59,11,0	1/1:2,0:2:4.07:12,4,0
chr10	42614405	.	C	CAA	14261.21	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=-7.132;DP=433;FS=0.000;HRun=0;HaplotypeScore=68.6122;InbreedingCoeff=0.9547;MQ=83.69;MQ0=1;MQRankSum=-4.868;QD=46.30;ReadPosRankSum=2.429;VQSLOD=6.2269;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:6.62:0,7,166	1/1:2,5:7:18.06:335,18,0	0/0:25,0:25:66.13:0,66,932	0/0:16,0:11:26.99:0,27,350	0/0:8,0:8:15.84:0,16,158	0/0:16,0:16:48.16:0,48,777	0/0:25,0:25:69.22:0,69,1082	1/1:1,14:16:42.13:751,42,0	0/0:16,0:16:45.14:0,45,701	1/1:3,13:16:45.15:827,45,0	1/1:0,7:8:24.08:450,24,0	1/1:4,17:21:57.20:1065,57,0	1/1:3,10:12:36.12:651,36,0	1/1:0,14:14:42.14:795,42,0	1/1:6,17:23:63.20:1137,63,0	1/1:4,1:20:54.05:687,54,0	1/1:0,25:24:60.21:1137,60,0	1/1:0,18:18:45.15:852,45,0	1/1:1,19:20:57.19:1026,57,0	1/1:1,7:8:21.07:381,21,0	1/1:1,22:24:51.33:949,51,0	1/1:1,10:12:30.53:532,31,0	1/1:0,10:10:20.98:336,21,0	1/1:0,19:19:42.82:778,43,0	1/1:3,6:9:24.08:441,24,0	1/1:0,13:15:42.13:731,42,0	1/1:2,5:7:15.05:284,15,0	1/1:0,3:3:6.02:114,6,0
chr10	42615976	.	AG	A	15948.25	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=11.385;DP=675;FS=6.343;HRun=2;HaplotypeScore=79.3869;InbreedingCoeff=0.9990;MQ=93.25;MQ0=0;MQRankSum=-6.015;QD=34.52;ReadPosRankSum=3.544;VQSLOD=5.2821;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,114,1686	1/1:1,7:8:20.98:251,21,0	0/0:32,0:32:94.79:0,95,1268	0/0:30,0:29:82.77:0,83,1091	0/0:30,0:30:87.29:0,87,1302	0/0:29,0:29:87.27:0,87,1264	0/0:36,0:36:99:0,108,1595	1/1:1,30:31:84.21:1044,84,0	0/0:18,0:18:54.18:0,54,809	1/1:1,21:22:60.17:762,60,0	1/1:0,16:16:45.10:561,45,0	1/1:2,20:22:60.19:778,60,0	1/1:0,26:26:72.23:931,72,0	1/1:0,19:19:51.17:660,51,0	1/1:0,33:32:78.25:1011,78,0	1/1:0,23:23:66.21:856,66,0	1/1:0,33:33:93.26:1184,93,0	1/1:0,22:22:51.17:660,51,0	1/1:0,17:17:51.15:647,51,0	1/1:0,17:17:45.15:584,45,0	1/1:2,26:28:75.24:974,75,0	1/1:2,19:21:45.15:584,45,0	1/1:0,15:15:36.12:467,36,0	1/1:0,31:31:90.29:1168,90,0	1/1:1,21:22:57.19:740,57,0	1/1:0,26:26:78.24:998,78,0	1/1:1,20:21:57.18:737,57,0	1/1:0,9:9:27.09:351,27,0
chr10	42616103	.	ATGTGTG	A	407.11	PASS	AC=2;AF=0.040;AN=50;BaseQRankSum=1.587;DP=641;FS=16.834;HRun=0;HaplotypeScore=173.1301;InbreedingCoeff=0.4737;MQ=60.19;MQ0=11;MQRankSum=-2.985;QD=13.57;ReadPosRankSum=0.681;VQSLOD=1.7742;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:15.05:0,15,255	0/0:11,0:11:6.02:0,6,129	./.	./.	1/1:16,12:29:29.54:500,30,0	0/0:21,0:22:32.70:0,33,881	0/0:26,0:27:36.99:0,37,935	0/0:37,0:37:27.88:0,28,356	0/0:14,0:14:20.76:0,21,500	0/0:30,0:28:33.16:0,33,479	0/0:15,0:15:9.03:0,9,167	0/0:22,0:22:12.04:0,12,233	0/0:17,0:17:5.87:0,6,139	0/0:14,0:14:9.50:0,10,184	0/0:25,0:24:9.03:0,9,182	0/0:20,0:20:20.96:0,21,383	0/0:25,0:23:9.03:0,9,224	0/0:12,0:11:11.14:0,11,151	0/0:25,0:24:21.07:0,21,434	0/0:27,0:27:12.04:0,12,260	./.	0/0:16,0:16:9.03:0,9,232	0/0:25,0:24:10.85:0,11,205	0/0:23,0:23:2.45:0,2,69	0/0:30,0:29:18.06:0,18,335	0/0:31,0:31:42.66:0,43,667	0/0:19,0:18:5.96:0,6,117	0/0:11,0:11:15.05:0,15,401
chr10	42616106	.	T	TGTGTATGTATGA	11859.89	PASS	AB=1.000;AC=41;AF=0.732;AN=56;BaseQRankSum=-0.144;DP=671;FS=0.884;HRun=0;HaplotypeScore=212.6925;InbreedingCoeff=0.4771;MQ=58.53;MQ0=12;MQRankSum=-5.890;QD=21.88;ReadPosRankSum=1.085;VQSLOD=3.3704;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:41,0:40:27.07:662,27,0	1/1:11,0:11:6.02:181,6,0	0/0:21,0:17:41.71:0,42,968	0/0:33,0:24:68.66:0,69,1413	0/1:30,0:29:99:631,0,225	0/0:25,0:25:47.90:0,48,1097	0/0:30,0:30:70.50:0,70,1811	1/1:38,0:38:68.51:1683,69,0	0/0:20,0:20:47.92:0,48,1085	1/1:31,0:29:60.79:1568,61,0	1/1:16,0:15:14.33:295,14,0	1/1:22,0:22:9.03:273,9,0	0/1:19,0:19:17.71:84,0,18	0/1:16,0:16:4.67:312,0,5	1/1:25,0:24:21.01:354,21,0	1/1:22,0:22:21.35:441,21,0	1/1:25,0:23:13.53:340,14,0	1/1:13,0:12:17.60:139,18,0	1/1:24,0:23:66.15:1305,66,0	1/1:29,0:29:14.66:320,15,0	1/1:16,0:16:3.01:65,3,0	0/1:20,0:20:48.08:250,0,48	0/1:27,0:26:9.21:238,0,9	1/1:23,0:23:5.82:141,6,0	1/1:30,0:29:18.06:453,18,0	1/1:31,0:31:50.31:1555,50,0	1/1:4,13:21:6.49:217,6,0	1/1:11,0:11:7.47:351,7,0
chr10	42616108	.	T	TGTATGTATGA	11855.53	PASS	AB=0.951;AC=37;AF=0.661;AN=56;BaseQRankSum=-0.497;DP=673;FS=2.453;HRun=0;HaplotypeScore=195.8322;InbreedingCoeff=0.2771;MQ=58.29;MQ0=13;MQRankSum=-6.227;QD=21.75;ReadPosRankSum=2.244;VQSLOD=3.7941;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:39,0:38:24.04:674,24,0	1/1:11,0:11:6.02:195,6,0	0/0:19,0:15:41.71:0,42,968	0/0:33,0:24:68.56:0,69,1412	0/1:30,0:29:99:634,0,105	0/0:25,0:25:53.83:0,54,1189	0/0:31,0:31:77.16:0,77,1848	1/1:39,0:39:39.88:1634,40,0	0/0:20,0:20:48.06:0,48,1074	1/1:31,0:29:57.41:1579,57,0	1/1:18,0:16:14.72:313,15,0	0/1:22,0:22:7.93:289,0,8	0/1:19,0:19:1.14:106,0,1	1/1:4,12:18:8.93:391,9,0	1/1:27,0:26:21.89:357,22,0	1/1:21,0:21:21.30:511,21,0	0/1:25,0:23:9.06:199,0,9	0/1:13,0:12:5.20:137,0,5	1/1:23,0:22:66.12:1262,66,0	0/1:28,0:28:60.27:228,0,60	1/1:16,0:16:3.01:65,3,0	0/1:5,14:23:58.91:304,0,59	0/1:28,0:27:9.89:266,0,10	1/1:23,0:23:5.75:135,6,0	1/1:29,0:28:18.06:495,18,0	1/1:30,0:30:66.46:1593,66,0	1/1:21,0:20:6.49:208,6,0	0/1:11,0:11:69.96:282,0,70
chr10	42616109	.	G	GTA	4143.44	PASS	AB=0.944;AC=37;AF=0.661;AN=56;BaseQRankSum=9.235;DP=675;FS=1.876;HRun=0;HaplotypeScore=145.3779;InbreedingCoeff=0.2558;MQ=57.24;MQ0=13;MQRankSum=-5.157;QD=7.56;ReadPosRankSum=2.708;VQSLOD=3.6593;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:41,1:41:41.75:343,42,0	1/1:11,1:12:6.01:70,6,0	0/0:18,0:14:41.13:0,41,385	0/0:33,0:24:57.39:0,57,601	1/1:32,0:31:46.84:306,47,0	0/0:25,0:25:34.09:0,34,456	0/0:31,0:31:74.94:0,75,740	0/1:36,0:36:56.85:495,0,57	0/0:20,0:20:47.63:0,48,448	1/1:29,2:29:37.31:495,37,0	1/1:15,2:15:14.95:143,15,0	0/1:22,1:23:2.96:86,0,3	0/1:18,0:18:10.07:38,0,10	1/1:17,1:18:9:89,9,0	1/1:24,2:25:26.96:246,27,0	1/1:19,4:23:21.04:243,21,0	0/1:26,0:24:12.15:49,0,12	0/1:12,0:12:15.03:42,0,15	1/1:4,19:22:21.37:367,21,0	0/1:11,15:26:45.83:46,0,80	1/1:16,0:16:2.98:22,3,0	0/1:23,0:23:32.92:65,0,33	0/1:24,3:26:3.94:90,0,4	1/1:24,0:24:3.01:30,3,0	1/1:24,5:28:18.05:215,18,0	1/1:31,1:32:28.45:522,28,0	1/1:20,0:19:5.83:40,6,0	0/1:11,0:11:65.09:103,0,65
chr10	42616110	.	T	TATGTATGA	11845.55	PASS	AB=0.867;AC=36;AF=0.643;AN=56;BaseQRankSum=-1.685;DP=684;FS=3.601;HRun=0;HaplotypeScore=185.1456;InbreedingCoeff=0.1329;MQ=56.90;MQ0=14;MQRankSum=-5.336;QD=21.23;ReadPosRankSum=3.454;VQSLOD=3.8469;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:43,0:42:39.09:814,39,0	1/1:2,9:12:6.02:229,6,0	0/0:18,0:14:42.07:0,42,969	0/0:33,0:24:68.56:0,69,1412	0/1:32,0:31:25.33:637,0,25	0/0:24,0:24:54.17:0,54,1186	0/0:31,0:31:80.14:0,80,1853	0/1:36,0:36:19.40:1524,0,19	0/0:20,0:20:48.11:0,48,1113	1/1:32,0:30:38.96:1610,39,0	1/1:17,0:14:0.12:328,0,0	0/1:5,18:28:3.96:355,0,4	0/1:4,11:18:39.62:129,0,40	1/1:18,0:18:5.24:311,5,0	1/1:28,0:27:7.94:356,8,0	1/1:23,0:23:16.15:579,16,0	0/1:25,0:23:36.39:127,0,36	0/1:13,0:12:12.28:114,0,12	1/1:22,0:21:63.01:1212,63,0	0/1:23,0:23:91.25:201,0,91	1/1:16,0:16:3.01:65,3,0	0/1:23,0:23:72.96:228,0,73	0/1:6,20:28:7.02:312,0,7	1/1:3,16:26:2.02:136,2,0	1/1:29,0:28:18.06:539,18,0	1/1:32,0:32:78.96:1625,79,0	1/1:20,0:19:6.46:135,6,0	0/1:13,0:13:99:278,0,115
chr10	42616112	.	T	TATGA	2982.44	PASS	AB=0.951;AC=29;AF=0.518;AN=56;BaseQRankSum=8.602;DP=681;FS=31.549;HRun=0;HaplotypeScore=164.3616;InbreedingCoeff=-0.1448;MQ=56.06;MQ0=15;MQRankSum=-4.902;QD=5.64;ReadPosRankSum=7.029;VQSLOD=1.1528;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:42,1:42:99:179,0,141	0/1:11,1:12:14.94:93,0,15	0/0:19,0:14:40.54:0,41,625	0/0:31,0:22:61.29:0,61,967	0/1:32,0:31:54.64:55,0,260	0/0:25,0:25:57.61:0,58,892	0/0:31,0:31:77.78:0,78,1303	0/1:35,0:35:99:188,0,190	0/0:20,0:20:48.34:0,48,815	0/1:32,2:32:36.01:404,0,36	1/1:16,1:15:17.58:185,18,0	0/1:25,1:26:21.75:127,0,22	0/1:16,0:16:27.49:27,0,36	1/1:18,1:19:9.02:131,9,0	0/1:25,2:26:35.19:204,0,35	1/1:19,4:23:23.11:371,23,0	0/0:26,0:24:8.93:0,9,87	0/1:7,0:14:45.83:46,0,57	0/1:20,0:19:54.35:117,0,54	0/1:23,0:23:18.97:19,0,160	1/1:16,0:16:2.22:7,2,0	0/1:23,0:23:91.25:91,0,92	0/1:25,3:27:23.80:151,0,24	1/1:23,0:23:2.16:35,2,0	1/1:25,5:29:17.98:343,18,0	0/1:31,0:32:99:352,0,103	1/1:21,0:20:0.66:26,1,0	0/1:13,0:13:2.42:2,0,249
chr10	42616114	.	T	TATGA	6692.21	PASS	AB=0.957;AC=28;AF=0.500;AN=56;BaseQRankSum=8.518;DP=671;FS=14.541;HRun=0;HaplotypeScore=148.6835;InbreedingCoeff=-0.3545;MQ=53.67;MQ0=16;MQRankSum=-4.784;QD=12.30;ReadPosRankSum=7.404;VQSLOD=2.9169;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:42,0:41:99:439,0,132	0/1:13,0:13:81.51:100,0,82	0/0:19,0:13:32.82:0,33,619	0/0:30,0:20:53.41:0,53,825	1/1:31,0:30:36.25:466,36,0	0/0:25,0:25:57.62:0,58,897	0/0:33,0:33:80.79:0,81,1355	0/1:33,0:33:99:875,0,197	0/0:20,0:20:48.34:0,48,813	0/1:34,0:32:99:827,0,165	0/1:18,0:15:33.89:268,0,34	0/1:25,0:25:46.75:149,0,47	0/1:16,0:16:37.77:38,0,59	0/1:19,0:19:11.98:167,0,12	0/1:8,15:24:37.22:258,0,37	1/1:8,13:24:3.79:483,4,0	0/1:10,13:23:26.84:27,0,88	0/1:14,0:13:49.99:115,0,50	0/1:19,0:18:17.44:587,0,17	0/1:21,0:21:54.70:55,0,167	1/1:6,8:16:3.01:43,3,0	0/1:23,0:23:88.31:88,0,129	0/1:28,0:27:55.66:160,0,56	1/1:24,0:24:2.16:49,2,0	1/1:7,20:30:18.06:395,18,0	0/1:31,0:31:99:922,0,103	0/1:21,0:20:34.31:34,0,41	0/1:11,0:11:99:146,0,226
chr10	42619041	.	ATG	A	1875.10	PASS	AB=0.596;AC=11;AF=0.196;AN=56;BaseQRankSum=3.437;DP=798;FS=49.566;HRun=0;HaplotypeScore=190.2469;InbreedingCoeff=0.9061;MQ=55.62;MQ0=11;MQRankSum=2.177;QD=10.30;ReadPosRankSum=0.367;VQSLOD=1.6702;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:88.47:0,88,1373	0/0:8,0:8:12.03:0,12,180	0/0:33,0:18:44.91:0,45,618	0/0:31,0:11:28.64:0,29,316	0/0:28,0:28:42.09:0,42,707	0/0:28,0:28:57.18:0,57,930	0/0:22,0:22:45.14:0,45,722	0/0:23,0:23:57.14:0,57,928	0/0:29,0:29:69.21:0,69,1108	0/0:42,0:41:66.95:0,67,1472	0/0:22,0:21:23.80:0,24,340	0/1:8,19:28:5.01:171,0,5	1/1:4,23:27:41.67:533,42,0	1/1:5,18:23:18.02:231,18,0	0/0:29,0:29:74.80:0,75,1115	0/0:25,0:25:41.70:0,42,669	0/0:32,0:32:59.17:0,59,901	0/0:15,0:15:33.11:0,33,550	0/0:22,0:21:51.15:0,51,782	0/0:32,0:32:57.64:0,58,846	0/0:37,0:37:66.19:0,66,1034	1/1:8,28:36:27.02:347,27,0	1/1:7,21:28:33.10:425,33,0	1/1:15,25:40:27.09:347,27,0	0/0:36,0:36:69.44:0,69,1118	0/0:30,0:30:53.11:0,53,884	0/0:35,0:35:88.28:0,88,1425	0/0:16,0:16:30.09:0,30,450
chr10	42619052	.	TGC	T	817.17	PASS	AB=0.988;AC=13;AF=0.232;AN=56;BaseQRankSum=10.033;DP=808;FS=81.680;HRun=0;HaplotypeScore=201.0627;InbreedingCoeff=0.7353;MQ=52.07;MQ0=22;MQRankSum=0.680;QD=3.48;ReadPosRankSum=-2.018;VQSLOD=-0.4303;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,1:37:85.18:0,85,1631	0/1:9,0:9:7.93:8,0,210	0/0:47,1:16:44.73:0,45,795	0/0:41,0:13:32.60:0,33,418	0/0:25,0:25:42.09:0,42,839	0/0:21,0:21:54.19:0,54,1093	0/0:22,0:22:59.63:0,60,950	0/0:26,0:25:75.10:0,75,1285	0/0:25,0:25:69.22:0,69,1319	0/1:39,0:38:29.04:29,0,1629	0/0:21,0:20:26.56:0,27,438	0/1:26,1:27:1.21:77,0,1	1/1:27,1:28:46.19:288,46,0	1/1:25,1:26:22.93:118,23,0	0/0:29,0:29:70.54:0,71,1294	0/0:26,0:26:27.78:0,28,763	0/0:32,0:32:52.04:0,52,1064	0/0:12,0:12:27.79:0,28,621	0/0:24,0:22:66.05:0,66,1069	0/0:35,0:35:57.64:0,58,950	0/0:38,0:36:47.52:0,48,1116	1/1:35,0:35:25.70:142,26,0	1/1:29,0:29:34.26:173,34,0	1/1:42,0:41:20.65:164,21,0	0/0:36,0:36:72.19:0,72,1311	0/0:26,0:26:4.43:0,4,959	0/0:35,0:35:57.54:0,58,1627	0/0:14,0:14:30.01:0,30,492
chr10	42619065	.	GTATA	G	2335.27	PASS	AB=0.953;AC=22;AF=0.393;AN=56;BaseQRankSum=-1.139;DP=784;FS=31.935;HRun=0;HaplotypeScore=219.0311;InbreedingCoeff=-0.2292;MQ=47.73;MQ0=25;MQRankSum=-0.318;QD=4.57;ReadPosRankSum=-3.782;VQSLOD=0.8540;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:42:22.32:0,22,485	0/1:10,0:10:2.89:22,0,3	0/0:38,0:8:24.08:0,24,413	0/0:37,0:9:23.52:0,24,299	1/1:19,2:23:5.13:125,5,0	0/0:22,0:22:48.16:0,48,764	0/0:22,0:22:48.14:0,48,776	0/1:28,2:28:64.08:226,0,64	0/0:22,0:22:47.84:0,48,780	0/1:38,5:41:99:510,0,116	0/0:17,2:19:5.54:0,6,47	0/1:25,0:26:27.52:149,0,28	0/1:22,1:24:38.20:145,0,38	0/1:24,0:26:66.47:158,0,66	0/1:31,0:31:99:123,0,171	0/1:25,0:25:38.43:38,0,136	0/0:35,0:35:72.23:0,72,1174	0/1:11,0:11:28.73:50,0,29	0/1:19,1:19:48.02:86,0,48	0/0:31,3:35:1.40:0,1,257	0/1:39,0:37:99:139,0,120	1/1:30,0:30:6.49:62,6,0	0/1:27,0:29:19.53:108,0,20	1/1:41,0:41:11.92:67,12,0	0/1:28,3:31:15.76:16,0,109	0/1:22,3:25:99:334,0,132	0/1:29,2:31:99:138,0,124	0/1:13,0:13:4.27:4,0,81
chr10	42619069	.	ATG	A	424.99	PASS	AB=0.992;AC=9;AF=0.173;AN=52;BaseQRankSum=-3.637;DP=774;FS=11.572;HRun=0;HaplotypeScore=205.1184;InbreedingCoeff=0.4592;MQ=47.24;MQ0=25;MQRankSum=3.272;QD=2.78;ReadPosRankSum=1.268;VQSLOD=1.7872;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:41,1:41:0.50:104,0,1	0/0:10,0:10:2.40:0,2,24	./.	./.	0/0:23,0:22:6.28:0,6,39	1/1:12,10:22:12.03:134,12,0	1/1:12,10:22:17.88:201,18,0	0/0:28,0:26:10.43:0,10,94	1/1:12,9:22:11.67:114,12,0	0/0:41,0:39:3.14:0,3,166	0/0:13,0:20:5.49:0,5,24	0/1:21,0:22:3.64:4,0,18	0/1:23,0:23:3.94:4,0,17	0/0:25,0:25:13.61:0,14,117	0/0:27,0:30:19.90:0,20,117	0/0:24,0:25:9.74:0,10,115	0/0:15,0:40:39:0,39,360	0/0:9,0:12:1.82:0,2,5	0/0:13,0:18:6.73:0,7,42	0/0:28,0:37:26.72:0,27,168	0/0:41,0:38:13.07:0,13,101	0/0:28,0:28:2.98:0,3,22	0/0:31,0:30:4.71:0,5,57	0/0:42,0:41:1.76:0,2,4	0/0:20,0:32:8.97:0,9,69	0/0:23,0:23:29.43:0,29,214	0/0:29,0:30:8.88:0,9,59	0/0:7,0:13:12:0,12,104
chr10	42619720	.	T	TGG	123.53	PASS	AB=0.977;AC=9;AF=0.161;AN=56;BaseQRankSum=0.599;DP=520;FS=3.960;HRun=9;HaplotypeScore=127.4895;InbreedingCoeff=0.2361;MQ=77.53;MQ0=1;MQRankSum=-2.386;QD=0.93;ReadPosRankSum=-3.301;VQSLOD=-0.5000;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:14,7:21:9.03:138,9,0	0/0:10,0:10:3.74:0,4,11	0/0:24,0:23:26.35:0,26,299	0/0:15,0:15:18.26:0,18,209	1/1:16,0:16:2.99:23,3,0	0/0:25,0:25:63.15:0,63,670	0/0:24,0:24:60.12:0,60,628	0/0:19,0:19:14.09:0,14,52	0/0:18,0:18:42.09:0,42,438	0/1:21,0:21:9.19:19,0,9	0/1:22,0:22:12.86:16,0,13	0/0:15,0:15:3:0,3,7	0/0:15,0:15:1.75:0,2,5	0/0:20,0:20:5.67:0,6,15	0/0:21,0:21:10.30:0,10,31	0/0:18,0:18:1.11:0,1,5	0/0:33,0:33:5.33:0,5,33	0/0:14,0:13:11.01:0,11,29	0/1:12,0:13:15.73:16,0,40	0/0:19,0:19:14.26:0,14,53	0/0:14,0:14:4.63:0,5,16	0/0:17,0:17:3.36:0,3,8	0/1:20,0:21:5.82:36,0,6	0/0:8,0:8:2.65:0,3,7	0/0:22,0:22:13.42:0,13,51	0/1:19,0:19:6.06:6,0,10	0/0:19,0:19:19.84:0,20,67	0/0:17,0:17:17.61:0,18,67
chr10	42619728	.	GGT	G	3965.36	PASS	AB=1.000;AC=42;AF=0.750;AN=56;BaseQRankSum=3.462;DP=416;FS=1.528;HRun=0;HaplotypeScore=65.8898;InbreedingCoeff=0.7023;MQ=77.87;MQ0=1;MQRankSum=-3.863;QD=12.71;ReadPosRankSum=-0.384;VQSLOD=3.0558;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:23.80:0,24,205	1/1:6,1:7:4.78:50,5,0	0/0:19,0:18:44.75:0,45,546	0/0:13,0:13:30.17:0,30,372	1/1:13,0:13:15.72:120,16,0	0/0:23,0:23:66.23:0,66,1115	0/0:23,0:23:66.10:0,66,1009	1/1:20,4:24:60.01:615,60,0	0/0:14,0:14:42.12:0,42,665	1/1:11,2:13:23.63:235,24,0	1/1:14,0:14:5.66:110,6,0	1/1:13,0:13:7.79:29,8,0	1/1:10,0:10:8.12:38,8,0	1/1:15,0:15:15.58:58,16,0	1/1:16,0:16:23.29:97,23,0	0/1:17,0:17:80.75:111,0,81	0/1:23,0:23:53.30:83,0,53	1/1:15,1:15:26.59:161,27,0	1/1:7,4:11:30.49:346,30,0	1/1:3,11:14:32.94:398,33,0	1/1:6,7:13:6.02:85,6,0	1/1:6,0:6:8.02:36,8,0	1/1:13,1:14:19.89:140,20,0	1/1:10,0:10:7.79:29,8,0	1/1:17,1:18:31.52:251,32,0	1/1:9,2:11:20.70:193,21,0	1/1:6,11:17:30.10:422,30,0	1/1:3,14:17:27.04:359,27,0
chr10	42619729	.	GT	G	5031.95	PASS	AB=0.941;AC=43;AF=0.768;AN=56;BaseQRankSum=2.964;DP=407;FS=1.547;HRun=1;HaplotypeScore=55.1288;InbreedingCoeff=0.8578;MQ=78.40;MQ0=1;MQRankSum=-3.238;QD=16.61;ReadPosRankSum=-1.384;VQSLOD=4.5301;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:22.38:0,22,144	1/1:1,6:7:5.95:59,6,0	0/0:19,0:18:42.46:0,42,464	0/0:12,1:13:30.15:0,30,322	1/1:13,0:13:26.92:219,27,0	0/0:23,0:23:66.20:0,66,861	0/0:23,0:23:66.09:0,66,812	1/1:18,4:22:59.56:487,60,0	0/0:14,0:14:42.12:0,42,532	1/1:8,4:12:23.91:218,24,0	1/1:11,4:15:31.97:282,32,0	1/1:0,12:12:9.03:125,9,0	1/1:1,9:10:8.49:102,8,0	1/1:1,14:15:18.06:250,18,0	1/1:1,15:16:26.51:346,27,0	0/1:15,1:16:0.58:242,0,1	1/1:19,2:21:36.13:358,36,0	1/1:2,14:15:30.01:372,30,0	1/1:9,2:11:31.89:219,32,0	1/1:11,2:13:32.52:214,33,0	1/1:10,1:11:5.88:36,6,0	1/1:0,5:5:9.03:124,9,0	1/1:2,12:14:20.27:225,20,0	1/1:0,10:10:9.03:125,9,0	1/1:12,7:19:47.71:467,48,0	1/1:4,7:11:21.39:212,21,0	1/1:11,6:17:29.48:186,29,0	1/1:15,2:17:26.39:164,26,0
chr10	42620475	.	T	TACACACACACACACAC	8121	PASS	AB=0.857;AC=40;AF=0.800;AN=50;BaseQRankSum=2.146;DP=748;FS=3.154;HRun=0;HaplotypeScore=291.3076;InbreedingCoeff=0.5275;MQ=49.61;MQ0=13;MQRankSum=-5.592;QD=14.63;ReadPosRankSum=-3.247;VQSLOD=2.8597;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	1/1:6,0:14:6.02:179,6,0	0/0:24,0:6:9.03:0,9,249	0/0:33,0:15:9.03:0,9,227	1/1:16,0:16:6:65,6,0	0/1:23,0:23:12.10:12,0,723	0/0:32,0:32:45.95:0,46,1496	1/1:32,0:32:45.03:1275,45,0	0/0:26,0:28:46.75:0,47,1826	1/1:17,0:33:49.28:1078,49,0	./.	1/1:13,0:35:18.10:480,18,0	1/1:17,0:36:8.51:285,9,0	1/1:19,0:38:0.45:1,0,0	1/1:13,0:30:3.01:89,3,0	1/1:11,0:22:9.92:468,10,0	1/1:15,3:24:6.49:446,6,0	0/1:12,0:20:19.25:233,0,19	1/1:21,0:20:23.13:381,23,0	1/1:13,0:20:9.03:259,9,0	1/1:36,0:35:10.45:150,10,0	./.	1/1:13,0:25:0.94:2,1,0	1/1:19,0:40:4.94:143,5,0	1/1:13,0:26:9.03:186,9,0	1/1:17,0:31:48.13:1374,48,0	1/1:23,0:24:17.30:654,17,0	1/1:6,0:6:9.03:360,9,0
chr10	42622673	.	GA	G	5446.82	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=6.898;DP=690;FS=11.225;HRun=3;HaplotypeScore=87.2281;InbreedingCoeff=0.9959;MQ=83.84;MQ0=0;MQRankSum=-2.860;QD=33.01;ReadPosRankSum=0.888;VQSLOD=4.3959;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,156,2181	0/0:8,0:8:24.08:0,24,345	0/0:22,0:22:57.54:0,58,737	0/0:18,0:18:23.69:0,24,551	0/0:19,0:19:57.17:0,57,786	0/0:22,0:22:60.20:0,60,864	0/0:27,0:27:78.25:0,78,1106	0/0:27,0:27:78.23:0,78,1101	0/0:18,0:18:54.15:0,54,739	1/1:0,31:31:90.27:1103,90,0	1/1:1,23:24:66.20:812,66,0	0/0:29,0:29:84.27:0,84,1188	0/0:22,0:22:63.20:0,63,890	0/0:31,0:31:84.27:0,84,1193	1/1:1,26:27:63.20:781,63,0	0/0:31,0:31:93.30:0,93,1307	0/0:33,0:33:90.30:0,90,1294	1/1:1,27:28:69.22:855,69,0	0/0:19,0:19:57.16:0,57,769	0/0:21,0:21:60.19:0,60,845	0/0:28,0:28:84.27:0,84,1191	0/0:22,0:22:63.20:0,63,889	0/0:16,0:16:48.16:0,48,691	0/0:27,0:27:78.20:0,78,1078	1/1:1,19:20:54.17:669,54,0	1/1:1,34:35:99:1227,102,0	0/0:28,0:28:84.27:0,84,1192	0/0:5,0:5:15.05:0,15,216
chr10	42622818	.	A	AC	1439.48	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.756;DP=626;FS=8.452;HRun=1;HaplotypeScore=66.6440;InbreedingCoeff=0.9996;MQ=90.65;MQ0=0;MQRankSum=-4.059;QD=41.13;ReadPosRankSum=1.061;VQSLOD=3.9867;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,35:35:96.33:1534,96,0	0/0:14,0:14:39.13:0,39,545	0/0:28,0:27:69.15:0,69,909	0/0:33,0:32:77.78:0,78,990	0/0:15,0:15:45.15:0,45,629	0/0:26,0:26:75.23:0,75,1031	0/0:21,0:21:63.20:0,63,864	0/0:29,0:29:81.27:0,81,1128	0/0:13,0:13:39.13:0,39,546	0/0:20,0:20:60.18:0,60,821	0/0:14,0:14:39.13:0,39,545	0/0:20,0:20:60.19:0,60,822	0/0:19,0:19:57.17:0,57,779	0/0:23,0:23:69.23:0,69,960	0/0:26,0:26:78.26:0,78,1091	0/0:27,0:27:81.23:0,81,1081	0/0:26,0:26:78.26:0,78,1091	0/0:26,0:26:78.26:0,78,1091	0/0:19,0:19:57.18:0,57,775	0/0:18,0:18:54.17:0,54,738	0/0:30,0:30:87.29:0,87,1217	0/0:16,0:16:42.13:0,42,569	0/0:13,0:13:39.13:0,39,542	0/0:36,0:36:99:0,108,1508	0/0:16,0:15:48.16:0,48,671	0/0:23,0:23:69.22:0,69,949	0/0:22,0:22:66.20:0,66,905	0/0:16,0:16:39.13:0,39,545
chr10	42624806	.	A	AAAATAAAT	4697.36	PASS	AB=1.000;AC=33;AF=0.688;AN=48;BaseQRankSum=3.514;DP=264;FS=10.870;HRun=0;HaplotypeScore=85.2252;InbreedingCoeff=0.6517;MQ=70.69;MQ0=0;MQRankSum=-5.248;QD=23.84;ReadPosRankSum=-4.322;VQSLOD=1.8831;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:14:12.59:89,13,0	1/1:5,0:5:14.94:205,15,0	0/0:10,0:9:21.05:0,21,452	0/0:13,0:11:24.07:0,24,603	0/1:11,0:11:19.44:106,0,19	0/0:15,0:15:36.12:0,36,978	0/0:9,0:9:9.01:0,9,176	1/1:48,0:47:52.57:949,53,0	0/0:7,0:7:21.07:0,21,525	0/0:5,0:5:2.79:0,3,13	1/1:9,0:9:5.41:87,5,0	1/1:5,0:5:3.01:36,3,0	1/1:3,0:5:5.70:194,6,0	./.	1/1:4,0:4:4.90:112,5,0	./.	1/1:6,12:18:15.52:535,16,0	1/1:13,1:14:20.80:619,21,0	1/1:10,0:10:4.30:30,4,0	1/1:5,2:7:12.04:355,12,0	0/0:2,0:2:0.47:0,0,1	1/1:9,0:9:9.46:75,9,0	./.	./.	1/1:4,7:12:12.93:350,13,0	1/1:4,1:5:6.49:220,6,0	1/1:10,0:10:17.96:241,18,0	1/1:6,4:11:13.39:495,13,0
chr10	42625598	.	CTGGTGTACTTGGGG	C	271.17	PASS	AB=0.900;AC=3;AF=0.056;AN=54;BaseQRankSum=7.490;DP=1116;FS=0.648;HRun=0;HaplotypeScore=336.3664;InbreedingCoeff=0.0873;MQ=43.80;MQ0=86;MQRankSum=-0.673;QD=2.22;ReadPosRankSum=3.004;VQSLOD=1.8162;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:44:59.59:0,60,946	0/0:26,0:21:50.80:0,51,572	./.	0/0:58,0:2:0:0,0,0	0/0:40,0:34:42.54:0,43,564	0/0:20,0:20:51.16:0,51,1057	0/0:50,0:46:90.15:0,90,1487	0/0:61,0:51:99:0,113,1334	0/0:34,0:34:93.30:0,93,2421	0/0:55,0:50:38.39:0,38,967	0/0:24,0:22:18.93:0,19,390	0/0:53,0:49:89.53:0,90,1219	0/0:49,0:37:70.55:0,71,859	0/0:46,0:40:55.57:0,56,699	0/1:41,0:36:29.78:30,0,431	0/0:48,0:42:83.71:0,84,981	0/0:27,0:23:45.59:0,46,603	0/0:29,0:25:3.81:0,4,226	0/0:31,0:14:33.05:0,33,465	0/0:33,0:26:40.17:0,40,453	0/0:66,0:55:90.34:0,90,1222	0/0:44,0:40:75:0,75,1060	0/0:31,0:27:38.06:0,38,490	0/0:35,0:30:51.98:0,52,751	0/1:32,0:27:7.95:8,0,312	0/1:28,21:46:99:328,0,356	0/0:24,0:20:41.18:0,41,501	0/0:13,0:9:15.05:0,15,211
chr10	42626388	.	GAGGAAGGAAGGAAGGA	G	5837.17	PASS	AB=0.822;AC=25;AF=0.481;AN=52;BaseQRankSum=7.430;DP=599;FS=4.863;HRun=0;HaplotypeScore=261.0668;InbreedingCoeff=0.4820;MQ=62.46;MQ0=6;MQRankSum=-7.317;QD=18.83;ReadPosRankSum=0.299;VQSLOD=3.3359;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:31,0:37:99:194,0,125	0/1:3,0:8:8.92:82,0,9	./.	./.	1/1:9,3:11:6.02:160,6,0	0/0:23,0:23:36.11:0,36,2180	0/0:26,0:26:45.15:0,45,2490	0/0:21,0:21:12:0,12,203	0/0:22,0:22:30.10:0,30,1951	1/1:24,0:24:6.02:241,6,0	1/1:11,0:11:12.04:471,12,0	1/1:14,10:24:9.03:391,9,0	1/1:13,9:22:3.01:130,3,0	0/1:12,12:22:49.31:617,0,49	0/1:22,0:22:11.73:378,0,12	0/0:14,0:19:27.09:0,27,1064	0/0:16,0:22:42.14:0,42,1545	0/1:27,0:28:99:248,0,127	0/0:16,0:16:6.02:0,6,178	0/0:16,0:28:54.17:0,54,1131	0/0:31,0:30:15.05:0,15,432	1/1:13,11:24:21.07:871,21,0	1/1:11,8:19:9.03:371,9,0	1/1:19,2:21:1.67:128,2,0	1/1:12,0:12:9.03:330,9,0	1/1:22,0:22:29.90:1226,30,0	0/0:13,0:21:33.11:0,33,1195	0/0:8,0:8:14.25:0,14,268
chr10	42626566	.	A	AAATG	11833.25	PASS	AB=1.000;AC=27;AF=0.482;AN=56;BaseQRankSum=-6.182;DP=727;FS=12.894;HRun=0;HaplotypeScore=166.2544;InbreedingCoeff=0.8176;MQ=67.31;MQ0=4;MQRankSum=-2.854;QD=27.91;ReadPosRankSum=-1.976;VQSLOD=3.5097;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:40:63.06:0,63,583	0/0:4,0:10:2.85:0,3,28	0/1:26,0:23:3.07:3,0,122	0/0:13,0:12:2.98:0,3,21	0/0:10,0:20:8.60:0,9,66	0/0:28,0:27:45.14:0,45,673	0/0:20,0:21:30.10:0,30,452	0/0:18,0:23:0:0,0,0	0/0:30,0:30:60.18:0,60,895	1/1:14,24:39:75.26:1743,75,0	1/1:17,16:33:42.10:943,42,0	1/1:22,1:40:48.16:810,48,0	1/1:20,1:32:39.13:694,39,0	1/1:20,1:33:63.21:1071,63,0	1/1:8,23:32:57.20:1352,57,0	0/0:12,0:27:27.03:0,27,252	1/1:23,0:24:32.31:486,32,0	1/1:9,9:17:27.09:641,27,0	0/0:11,0:15:3:0,3,28	0/0:11,0:23:10.83:0,11,89	0/0:6,0:14:8.44:0,8,55	1/1:14,0:32:34.40:908,34,0	1/1:17,0:26:24.08:447,24,0	1/1:21,2:25:24.05:400,24,0	1/1:10,20:32:54.18:1240,54,0	1/1:10,18:28:51.16:1097,51,0	0/0:10,0:27:35.72:0,36,318	0/0:3,0:12:6.01:0,6,56
chr10	42627165	.	A	AT	684.62	PASS	AC=12;AF=0.240;AN=50;BaseQRankSum=2.493;DP=466;FS=14.014;HRun=9;HaplotypeScore=53.7728;InbreedingCoeff=0.8342;MQ=33.15;MQ0=147;MQRankSum=-2.208;QD=7.13;ReadPosRankSum=-2.224;VQSLOD=-0.1442;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:13:20.98:0,21,182	0/0:7,0:7:21:0,21,182	0/0:17,0:3:2.97:0,3,21	./.	0/0:26,0:26:14.37:0,14,119	0/0:16,0:9:17.98:0,18,156	0/0:9,0:3:9:0,9,78	0/0:20,0:11:29.99:0,30,260	0/0:21,0:16:35.98:0,36,312	0/0:28,0:24:62.86:0,63,536	0/0:19,0:19:11.98:0,12,104	1/1:2,14:8:6.02:66,6,0	1/1:0,13:8:15.04:166,15,0	1/1:3,11:7:3.01:33,3,0	0/0:10,0:8:17.99:0,18,156	0/0:19,0:15:38.99:0,39,338	0/0:10,0:5:14.95:0,15,123	0/0:7,0:3:9:0,9,78	0/0:16,0:9:26.46:0,26,211	0/0:23,0:23:47.96:0,48,416	./.	1/1:4,17:21:24:250,24,0	1/1:3,19:22:24.06:265,24,0	1/1:2,8:3:6.02:66,6,0	0/0:22,0:22:38.76:0,39,338	0/0:25,0:19:35.19:0,35,294	0/0:23,1:11:23.99:0,24,209	./.
chr10	42628013	.	A	AT	2124.76	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-5.314;DP=404;FS=0.483;HRun=8;HaplotypeScore=52.1277;InbreedingCoeff=0.9455;MQ=89.09;MQ0=0;MQRankSum=-2.672;QD=25.60;ReadPosRankSum=-0.393;VQSLOD=4.0225;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:54.01:0,54,494	0/0:3,0:3:9:0,9,82	0/0:15,0:15:30.23:0,30,343	0/0:22,0:22:28.46:0,28,427	0/0:15,0:15:39.02:0,39,357	0/0:18,0:18:51.03:0,51,467	0/0:13,0:13:30:0,30,275	0/0:19,0:19:51.02:0,51,463	0/0:16,0:16:48.03:0,48,439	1/1:2,13:15:39.12:450,39,0	1/1:2,12:14:2.62:284,3,0	0/0:12,0:12:36.02:0,36,329	0/0:16,0:16:45:0,45,405	0/0:10,0:10:30.02:0,30,275	1/1:1,8:10:26.91:291,27,0	0/0:16,0:16:42.01:0,42,384	0/0:10,0:10:27.01:0,27,247	1/1:1,12:13:30.09:345,30,0	0/0:17,0:17:39:0,39,350	0/0:16,0:16:48.03:0,48,439	0/0:13,0:13:39.02:0,39,357	0/0:16,0:16:39.02:0,39,357	0/0:11,0:11:33.02:0,33,302	0/0:20,0:20:57.03:0,57,522	1/1:2,13:15:36.11:415,36,0	1/1:1,15:16:45.13:519,45,0	0/0:15,0:15:42.02:0,42,384	0/0:6,0:6:15.01:0,15,137
chr10	42628206	.	C	CA	522.21	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=-0.517;DP=485;FS=1.951;HRun=7;HaplotypeScore=72.5932;InbreedingCoeff=0.6511;MQ=72.20;MQ0=0;MQRankSum=-1.570;QD=15.36;ReadPosRankSum=-0.841;VQSLOD=3.5416;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,19:23:51.16:615,51,0	0/0:12,0:12:33.05:0,33,319	0/1:10,0:10:8.34:8,0,138	0/0:11,0:11:17.17:0,17,138	0/0:29,0:29:78.12:0,78,753	0/0:17,0:17:51.08:0,51,493	0/0:8,0:8:21.03:0,21,203	0/0:27,0:27:66.07:0,66,632	0/0:13,0:13:36.06:0,36,348	0/0:20,0:20:48.06:0,48,461	0/0:15,0:15:42.07:0,42,406	0/0:25,0:25:69.11:0,69,666	0/0:13,0:13:33.05:0,33,319	0/0:19,0:19:48.07:0,48,463	0/0:14,0:14:39.06:0,39,377	0/0:18,0:18:51.08:0,51,492	0/0:29,0:29:84.11:0,84,805	0/0:9,0:9:18.03:0,18,174	0/0:11,0:11:30.03:0,30,283	0/0:26,0:26:75.12:0,75,724	0/0:8,0:8:18.03:0,18,174	0/0:9,0:9:21.03:0,21,203	0/0:28,0:28:75.12:0,75,724	0/0:7,0:7:18.03:0,18,174	0/0:24,0:24:63.09:0,63,603	0/0:19,0:19:47.65:0,48,432	0/0:30,0:30:75.08:0,75,724	0/0:10,0:10:15.02:0,15,145
chr10	42628245	.	A	ATT	8269.44	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=7.075;DP=540;FS=0.000;HRun=7;HaplotypeScore=90.5533;InbreedingCoeff=0.9576;MQ=76.51;MQ0=0;MQRankSum=-3.863;QD=20.88;ReadPosRankSum=1.344;VQSLOD=3.1170;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,0:19:1.38:81,1,0	1/1:0,0:9:22.56:80,23,0	0/0:17,0:18:39.09:0,39,440	0/0:10,0:10:24.07:0,24,280	0/0:29,0:29:86.95:0,87,968	0/0:23,0:23:69.21:0,69,803	0/0:13,0:13:39.12:0,39,454	1/1:8,0:37:73.67:290,74,0	0/0:16,0:16:48.13:0,48,548	1/1:3,0:21:54.08:517,54,0	1/1:2,1:19:48.08:474,48,0	1/1:3,23:28:63.22:1034,63,0	1/1:2,13:16:38.48:539,38,0	1/1:3,15:19:44.74:703,45,0	1/1:2,2:18:45.01:455,45,0	1/1:0,0:20:47.41:167,47,0	0/0:33,0:33:93.19:0,93,1037	1/1:2,0:14:26.92:261,27,0	1/1:2,0:13:30.78:124,31,0	1/1:0,0:23:50.10:187,50,0	1/1:0,0:8:19.96:70,20,0	1/1:1,11:12:30.10:482,30,0	1/1:2,19:21:54.18:886,54,0	1/1:1,8:9:21.07:345,21,0	1/1:5,1:28:66.07:650,66,0	1/1:2,0:23:66.07:660,66,0	1/1:2,0:21:42.42:149,42,0	1/1:2,0:16:28.33:115,28,0
chr10	42629081	.	GT	G	4304.31	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=7.310;DP=433;FS=1.454;HRun=11;HaplotypeScore=71.5663;InbreedingCoeff=0.8861;MQ=61.46;MQ0=0;MQRankSum=0.686;QD=19.74;ReadPosRankSum=-0.964;VQSLOD=5.5099;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,22:26:30.95:461,31,0	1/1:2,10:12:0.98:214,1,0	0/0:5,0:4:6.01:0,6,63	0/0:2,0:2:3.01:0,3,32	0/0:18,0:19:53.94:0,54,546	0/0:25,0:27:68.87:0,69,694	0/0:9,0:9:24.06:0,24,256	1/1:11,27:37:77.88:640,78,0	0/0:6,0:6:15.03:0,15,153	0/0:20,0:20:54.11:0,54,560	0/0:27,1:28:56.56:0,57,806	1/1:0,11:11:32.96:271,33,0	1/1:1,11:12:29.96:246,30,0	1/1:0,10:10:29.97:246,30,0	0/0:11,0:11:33.08:0,33,352	1/1:1,10:11:29.95:246,30,0	0/0:27,0:27:66.96:0,67,277	0/0:11,0:11:27.07:0,27,288	1/1:7,17:24:50.91:419,51,0	1/1:0,13:14:37.99:301,38,0	1/1:0,7:7:17.98:148,18,0	1/1:0,8:9:12.58:183,13,0	1/1:0,8:8:23.97:197,24,0	1/1:0,1:1:2.99:24,3,0	0/0:28,2:30:34.76:0,35,758	0/0:18,2:20:7.95:0,8,484	1/1:1,17:18:15.99:338,16,0	1/1:2,15:17:44.95:369,45,0
chr10	42629083	.	T	TG	926.06	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-6.607;DP=427;FS=9.572;HRun=0;HaplotypeScore=83.9861;InbreedingCoeff=0.7239;MQ=62.67;MQ0=0;MQRankSum=1.698;QD=35.62;ReadPosRankSum=2.089;VQSLOD=2.7471;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:65.51:0,66,489	0/0:12,0:12:35.77:0,36,280	0/0:6,0:5:11.97:0,12,133	0/0:2,0:2:3.01:0,3,42	0/0:20,0:20:42.35:0,42,666	0/0:26,0:26:64.73:0,65,926	0/0:9,0:9:27.08:0,27,360	0/0:33,0:32:98.37:0,98,741	0/0:7,0:7:21.03:0,21,244	0/0:21,0:21:60.18:0,60,792	0/0:28,0:28:84.24:0,84,1130	0/0:11,0:11:32.74:0,33,233	0/0:12,0:12:32.73:0,33,231	0/0:10,0:10:29.76:0,30,211	0/0:11,0:11:33.11:0,33,460	0/0:11,0:11:32.76:0,33,239	1/1:0,26:26:75.25:1021,75,0	0/0:11,0:11:33.08:0,33,422	0/0:23,0:23:68.41:0,68,513	0/0:14,0:14:41.64:0,42,298	0/0:7,0:7:17.86:0,18,127	0/0:9,0:9:22.23:0,22,167	0/0:8,0:8:23.81:0,24,169	0/0:1,0:1:2.50:0,2,9	0/0:30,0:30:85.62:0,86,1125	0/0:20,0:20:59.64:0,60,744	0/0:18,0:17:47.65:0,48,358	0/0:17,0:17:50.63:0,51,367
chr10	42629838	.	T	TTTTG	7060.38	PASS	AB=1.000;AC=18;AF=0.321;AN=56;BaseQRankSum=6.839;DP=728;FS=10.266;HRun=0;HaplotypeScore=129.4073;InbreedingCoeff=0.8259;MQ=63.53;MQ0=1;MQRankSum=-0.862;QD=29.92;ReadPosRankSum=0.312;VQSLOD=4.5313;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:12,21:35:57.19:1373,57,0	1/1:8,0:8:15.05:256,15,0	0/0:25,0:18:14.92:0,15,184	0/0:30,0:26:20:0,20,243	0/0:36,0:36:72.10:0,72,997	0/0:25,0:25:60.19:0,60,953	0/0:38,0:38:75.21:0,75,1118	0/1:47,0:47:20.89:755,0,21	0/0:32,0:33:78.25:0,78,1220	0/0:27,0:27:57.18:0,57,884	0/0:23,0:23:48.16:0,48,782	0/0:22,0:22:42.14:0,42,670	0/0:13,0:13:30.08:0,30,436	0/0:16,0:16:42.12:0,42,630	0/0:33,0:33:84.26:0,84,1320	1/1:24,0:24:45.15:801,45,0	1/1:6,23:32:56.87:1328,57,0	0/0:26,0:26:60.03:0,60,793	0/1:21,0:21:21.62:395,0,22	1/1:25,0:25:51.17:898,51,0	1/1:16,0:16:21.07:357,21,0	0/0:37,0:37:87.29:0,87,1388	0/0:26,0:26:63.15:0,63,995	0/0:27,0:27:57.17:0,57,874	0/0:27,0:27:57.15:0,57,835	0/0:28,0:28:66.22:0,66,1045	1/1:22,0:22:39.13:684,39,0	1/1:5,0:5:12.04:213,12,0
chr10	42629854	.	G	GTTTC	9098.45	PASS	AB=1.000;AC=20;AF=0.357;AN=56;BaseQRankSum=11.939;DP=746;FS=20.151;HRun=0;HaplotypeScore=129.7819;InbreedingCoeff=0.8377;MQ=64.66;MQ0=2;MQRankSum=-0.999;QD=32.26;ReadPosRankSum=2.326;VQSLOD=3.1600;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:40,0:40:99:877,0,190	1/1:0,8:9:17.93:396,18,0	0/0:29,0:18:37.41:0,37,480	0/0:29,0:26:56.79:0,57,716	0/1:36,0:36:56.01:56,0,548	0/0:27,0:27:72.19:0,72,1224	0/0:41,0:41:99:0,111,1668	1/1:5,37:46:99:1776,122,0	0/0:30,0:30:84.24:0,84,1485	0/0:31,0:31:83.88:0,84,1313	0/0:19,0:19:54.15:0,54,956	0/0:23,0:23:66.09:0,66,980	0/0:15,0:15:45.06:0,45,670	0/0:17,0:17:48.13:0,48,825	0/0:31,0:31:93.20:0,93,1635	1/1:1,25:26:45.03:1139,45,0	1/1:29,0:28:36.83:860,37,0	0/0:29,0:29:77.67:0,78,1197	1/1:5,17:22:50.26:807,50,0	1/1:2,25:27:65.89:1364,66,0	1/1:2,13:16:21.07:533,21,0	0/0:38,0:38:99:0,105,1775	0/0:27,0:27:75.19:0,75,1272	0/0:25,0:25:72.16:0,72,1181	0/0:25,0:25:75.16:0,75,1195	0/0:27,0:27:78.24:0,78,1356	1/1:2,21:25:39.13:985,39,0	1/1:0,6:6:12.04:304,12,0
chr10	42632016	.	C	CT	6794.48	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-14.533;DP=828;FS=2.266;HRun=2;HaplotypeScore=75.9137;InbreedingCoeff=0.9999;MQ=85.01;MQ0=0;MQRankSum=-2.188;QD=38.83;ReadPosRankSum=2.698;VQSLOD=5.5213;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,108,1339	0/0:18,0:18:54.16:0,54,657	0/0:30,0:30:73.63:0,74,853	0/0:26,0:26:75.18:0,75,884	0/0:31,0:31:81.25:0,81,1003	0/0:31,0:31:90.27:0,90,1102	0/0:28,0:28:81.25:0,81,1004	0/0:32,0:32:87.23:0,87,1027	0/0:42,0:42:99:0,126,1562	0/0:28,0:28:78.24:0,78,965	0/0:15,0:15:45.13:0,45,548	1/1:1,32:33:96.32:1383,96,0	1/1:1,25:26:75.18:1055,75,0	1/1:1,32:33:84.28:1208,84,0	0/0:44,0:44:99:0,132,1613	0/0:32,0:32:96.30:0,96,1190	0/0:30,0:30:87.26:0,87,1065	0/0:31,0:31:81.25:0,81,1004	0/0:21,0:21:60.18:0,60,731	0/0:34,0:34:96.29:0,96,1178	0/0:36,0:36:99:0,102,1265	1/1:3,17:20:51.17:735,51,0	1/1:3,31:34:93.31:1335,93,0	1/1:0,29:28:75.25:1080,75,0	0/0:31,0:31:93.29:0,93,1153	0/0:37,0:37:99:0,111,1367	0/0:30,0:30:87.27:0,87,1075	0/0:10,0:10:30.09:0,30,372
chr10	42633160	.	ATCAAAGCCTTGGGTGGATATCT	A	927.39	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.191;DP=703;FS=0.000;HRun=0;HaplotypeScore=378.4654;InbreedingCoeff=0.9914;MQ=83.08;MQ0=0;MQRankSum=-4.048;QD=44.16;ReadPosRankSum=-0.599;VQSLOD=1.3491;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,141,12967	0/0:11,0:11:33.09:0,33,3021	0/0:18,0:18:45.11:0,45,2605	0/0:24,0:25:63.22:0,63,4044	1/1:6,15:21:18.06:1018,18,0	0/0:18,0:18:51.18:0,51,4661	0/0:21,0:21:51.16:0,51,4510	0/0:40,0:40:99:0,108,7040	0/0:19,0:19:51.18:0,51,4648	0/0:19,0:19:51.18:0,51,4602	0/0:22,0:22:63.22:0,63,5743	0/0:29,0:29:78.25:0,78,6757	0/0:33,0:33:96.33:0,96,9256	0/0:27,0:27:75.26:0,75,6995	0/0:38,0:38:99:0,111,10308	0/0:19,0:19:57.20:0,57,5624	0/0:30,0:30:81.28:0,81,7549	0/0:25,0:25:75.26:0,75,7262	0/0:21,0:21:54.19:0,54,3761	0/0:32,0:30:84.29:0,84,8057	0/0:34,0:34:99:0,99,9159	0/0:16,0:16:48.16:0,48,4548	0/0:17,0:17:42.14:0,42,4302	0/0:29,0:29:84.29:0,84,7897	0/0:24,0:24:63.22:0,63,5668	0/0:30,0:30:87.30:0,87,7482	0/0:23,0:23:66.23:0,66,6307	0/0:12,0:12:33.11:0,33,3141
chr10	42633488	.	G	GA	2578.20	PASS	AC=20;AF=0.370;AN=54;BaseQRankSum=2.992;DP=507;FS=6.453;HRun=9;HaplotypeScore=84.3514;InbreedingCoeff=0.8605;MQ=47.23;MQ0=27;MQRankSum=-4.895;QD=13.36;ReadPosRankSum=-1.424;VQSLOD=3.2597;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,15:21:39.05:408,39,0	1/1:4,5:9:15.04:166,15,0	./.	0/0:7,0:1:3:0,3,26	1/1:12,12:21:36.03:361,36,0	0/0:16,0:16:29.73:0,30,255	0/0:13,0:13:8.79:0,9,186	1/1:9,6:13:11.52:132,12,0	0/0:19,0:19:38.85:0,39,338	0/0:21,0:20:35.02:0,35,353	0/0:19,0:16:26.26:0,26,233	0/0:23,0:22:11.52:0,12,99	0/0:13,0:13:1.53:0,2,136	0/0:20,0:19:23.96:0,24,208	0/0:26,0:27:16.72:0,17,179	1/1:12,16:26:10.75:315,11,0	0/0:30,0:29:32.85:0,33,285	0/0:19,0:19:23.88:0,24,208	1/1:8,11:17:39.02:403,39,0	1/1:11,14:22:29.84:299,30,0	1/1:1,2:3:2.74:33,3,0	0/0:12,0:12:11.98:0,12,104	0/0:20,0:16:17.74:0,18,153	0/0:11,0:9:11.81:0,12,90	0/0:15,0:15:11.92:0,12,102	0/0:23,0:20:29.88:0,30,248	1/1:14,12:23:38.33:362,38,0	1/1:12,8:18:9.95:302,10,0
chr10	42633500	.	A	AC	336.92	PASS	AC=2;AF=0.037;AN=54;BaseQRankSum=2.014;DP=538;FS=4.478;HRun=2;HaplotypeScore=81.6576;InbreedingCoeff=0.6918;MQ=44.36;MQ0=38;MQRankSum=-1.300;QD=14.04;ReadPosRankSum=-0.951;VQSLOD=2.6786;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:14,8:22:34.72:431,35,0	0/0:9,0:9:20.48:0,20,129	./.	0/0:7,0:1:3.01:0,3,31	0/0:25,0:22:45.01:0,45,336	0/0:15,0:15:37.64:0,38,339	0/0:14,0:14:38.84:0,39,408	0/0:22,0:20:41.75:0,42,301	0/0:20,0:20:44.51:0,45,414	0/0:18,0:17:38.06:0,38,275	0/0:21,0:19:28.09:0,28,278	0/0:19,0:18:19.72:0,20,119	0/0:14,0:11:19.90:0,20,144	0/0:20,0:17:32.27:0,32,216	0/0:27,0:27:1.67:0,2,142	0/0:27,0:25:51.40:0,51,381	0/0:30,0:30:47.97:0,48,497	0/0:21,0:19:20.72:0,21,187	0/0:20,0:17:39.35:0,39,309	0/0:29,0:24:40.01:0,40,245	0/0:7,0:7:14.52:0,15,86	0/0:13,0:13:29.31:0,29,227	0/0:23,0:18:30.76:0,31,214	0/0:12,0:11:23.01:0,23,140	0/0:20,0:20:23.42:0,23,180	0/0:26,0:22:36.04:0,36,374	0/0:24,0:21:42.96:0,43,244	0/0:21,0:17:42:0,42,246
chr10	42633502	.	CAA	C	650.97	PASS	AB=0.889;AC=14;AF=0.250;AN=56;BaseQRankSum=0.064;DP=547;FS=3.625;HRun=15;HaplotypeScore=85.8904;InbreedingCoeff=0.0807;MQ=44.48;MQ0=38;MQRankSum=-4.371;QD=2.66;ReadPosRankSum=0.538;VQSLOD=-0.5228;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:23:1.21:1,0,105	0/1:6,2:8:10.87:40,0,11	0/0:5,0:1:0:0,0,0	0/0:6,0:1:1.25:0,1,3	0/0:18,2:23:4.69:0,5,82	0/0:16,0:15:27.01:0,27,291	0/0:13,0:15:41.38:0,41,437	1/1:8,12:19:23.95:232,24,0	0/0:18,0:18:23.92:0,24,259	0/0:14,0:16:13.75:0,14,166	0/0:16,0:19:22.91:0,23,288	0/0:19,0:18:4.89:0,5,85	0/0:13,0:10:2.98:0,3,22	0/1:20,0:17:9.90:10,0,68	0/0:11,0:28:25.80:0,26,148	0/0:27,1:27:15.54:0,16,374	0/0:29,0:30:43.93:0,44,525	0/1:21,0:20:8.94:9,0,95	0/1:17,3:17:15.02:65,0,15	0/1:18,11:24:8.36:156,0,8	0/0:7,0:7:9.85:0,10,39	1/1:4,9:13:20.94:184,21,0	0/1:16,6:18:43.25:43,0,107	0/1:13,0:11:8.05:8,0,84	0/1:22,0:23:6.36:6,0,52	0/0:28,0:24:13.13:0,13,202	0/1:21,4:23:49.26:49,0,67	0/0:21,0:17:18.94:0,19,83
chr10	42633514	.	A	AAG	2992.93	PASS	AB=0.915;AC=28;AF=0.519;AN=54;BaseQRankSum=1.748;DP=522;FS=4.001;HRun=0;HaplotypeScore=80.9949;InbreedingCoeff=0.4455;MQ=45.36;MQ0=35;MQRankSum=-1.994;QD=9.12;ReadPosRankSum=3.324;VQSLOD=3.2717;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:20:32.69:254,33,0	1/1:2,7:9:17.95:210,18,0	./.	0/0:4,0:1:1.25:0,1,3	0/0:26,0:23:22.08:0,22,292	0/0:13,0:13:1.48:0,1,232	0/0:18,0:18:53.37:0,53,526	1/1:28,0:24:24.98:235,25,0	0/0:15,0:15:33.06:0,33,358	0/0:14,0:13:19.79:0,20,220	0/0:21,0:17:24.16:0,24,318	0/1:4,12:18:10.71:125,0,11	1/1:6,6:9:5.89:63,6,0	1/1:6,12:16:20.87:229,21,0	0/0:23,0:23:31.64:0,32,189	0/1:25,0:24:99:140,0,161	0/1:28,0:28:49.77:50,0,422	0/1:17,0:15:1.96:2,0,139	0/1:16,0:14:12.95:98,0,13	1/1:17,12:24:36.01:411,36,0	1/1:3,6:10:11.97:186,12,0	0/1:12,0:12:29.05:29,0,91	1/1:12,8:16:1.48:249,1,0	1/1:4,12:14:8.48:202,8,0	0/0:22,0:22:2.80:0,3,103	0/0:32,0:29:53.93:0,54,487	1/1:10,12:19:14.61:328,15,0	1/1:8,11:16:23.97:371,24,0
chr10	42633515	.	AAAG	A	926.75	PASS	AB=0.916;AC=11;AF=0.196;AN=56;BaseQRankSum=-4.149;DP=505;FS=5.022;HRun=0;HaplotypeScore=85.3081;InbreedingCoeff=0.2929;MQ=45.62;MQ0=33;MQRankSum=-2.493;QD=6.26;ReadPosRankSum=-2.286;VQSLOD=1.6945;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:20:5.36:0,5,397	0/0:9,0:9:15.06:0,15,142	0/1:3,0:1:0:0,0,0	0/0:4,0:1:2.90:0,3,16	0/0:26,0:24:48.29:0,48,366	0/0:13,0:12:13.88:0,14,163	0/0:19,0:19:24.33:0,24,348	0/0:28,0:24:2.54:0,3,51	0/1:16,0:16:69.82:84,0,70	1/1:13,1:13:7.69:169,8,0	0/1:21,0:17:4.53:5,0,313	0/0:18,0:17:4.24:0,4,178	0/0:9,0:6:3.01:0,3,41	0/0:16,0:13:8.04:0,8,162	0/1:23,0:23:80.90:145,0,81	0/0:25,0:23:34.20:0,34,377	0/0:29,0:28:27.83:0,28,382	1/1:16,1:15:0.82:108,1,0	0/0:15,0:13:13.21:0,13,71	0/0:29,0:23:19.72:0,20,219	0/0:9,0:9:15.03:0,15,182	0/0:11,0:11:11.80:0,12,64	0/0:21,0:16:1.94:0,2,246	0/0:15,0:13:16.15:0,16,163	0/1:6,16:22:10.26:77,0,10	1/1:12,20:28:34.28:478,34,0	0/0:22,0:19:20.89:0,21,281	0/0:17,0:14:24.01:0,24,298
chr10	42633516	.	AAG	A	792.39	PASS	AB=0.954;AC=12;AF=0.214;AN=56;BaseQRankSum=-0.158;DP=511;FS=0.479;HRun=0;HaplotypeScore=80.1802;InbreedingCoeff=0.0627;MQ=46.08;MQ0=33;MQRankSum=-4.198;QD=3.54;ReadPosRankSum=-0.542;VQSLOD=2.0935;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:19:41.77:0,42,382	0/0:10,0:10:6.06:0,6,102	0/0:3,0:1:0:0,0,0	0/0:4,0:1:2.37:0,2,8	0/0:28,0:26:29.98:0,30,293	0/0:12,0:11:21:0,21,174	0/0:19,0:19:40.12:0,40,396	0/1:28,0:24:11.89:66,0,12	0/1:16,0:16:94.09:94,0,105	0/1:13,1:13:0.73:113,0,1	0/0:24,0:20:14.17:0,14,339	0/0:19,0:18:22.26:0,22,205	0/0:9,0:6:3.01:0,3,33	0/1:16,1:14:8.50:9,0,166	0/1:22,1:23:50.94:51,0,60	0/0:23,0:21:26.69:0,27,317	0/0:29,0:28:49.35:0,49,462	0/1:15,2:15:1.96:98,0,2	0/0:18,0:16:3.21:0,3,60	0/1:29,0:24:42.60:43,0,122	0/0:9,0:9:15.02:0,15,154	0/1:10,1:11:11.22:42,0,11	0/0:21,0:16:10.43:0,10,208	0/1:14,1:13:3.97:4,0,106	0/1:21,1:22:19.36:67,0,19	1/1:31,1:28:14.76:352,15,0	0/0:22,0:19:20.65:0,21,194	0/0:16,0:13:24:0,24,237
chr10	42633517	.	AG	A	467.36	PASS	AB=0.978;AC=8;AF=0.143;AN=56;BaseQRankSum=-1.560;DP=496;FS=3.634;HRun=1;HaplotypeScore=74.5474;InbreedingCoeff=0.0614;MQ=46.41;MQ0=31;MQRankSum=-2.837;QD=3.44;ReadPosRankSum=-2.335;VQSLOD=-0.7353;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:17:45.63:0,46,344	0/0:10,0:10:18.74:0,19,117	0/0:3,0:1:0:0,0,0	0/0:4,0:1:2.04:0,2,6	0/0:23,3:24:16.82:0,17,194	0/0:12,0:11:8.62:0,9,149	0/0:19,0:19:23.16:0,23,357	0/0:27,0:24:2.62:0,3,71	0/1:16,0:16:91.94:92,0,95	0/1:14,0:13:8.66:79,0,9	0/0:23,0:19:28.89:0,29,302	0/0:19,0:18:22.82:0,23,158	0/0:9,0:6:2.98:0,3,22	0/0:17,0:14:6.55:0,7,127	0/1:19,1:20:19.17:19,0,47	0/0:20,0:19:34.86:0,35,268	0/0:25,0:24:56.97:0,57,488	0/1:17,0:15:8.84:65,0,9	0/0:18,0:16:5.47:0,5,67	0/0:29,0:24:7.65:0,8,147	0/0:9,0:9:14.98:0,15,126	0/0:11,0:11:6.36:0,6,76	0/0:22,0:17:32.13:0,32,211	0/1:15,0:13:19.03:19,0,64	0/1:20,2:22:19.62:43,0,20	1/1:32,0:28:2.76:278,3,0	0/0:22,0:19:30.26:0,30,182	0/0:16,0:13:23.89:0,24,186
chr10	42633559	.	A	AAAGG	4572.39	PASS	AB=1.000;AC=18;AF=0.321;AN=56;BaseQRankSum=-3.298;DP=553;FS=14.981;HRun=0;HaplotypeScore=102.7760;InbreedingCoeff=0.8131;MQ=60.13;MQ0=10;MQRankSum=-2.624;QD=20.23;ReadPosRankSum=-1.941;VQSLOD=3.3871;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:47.90:0,48,361	1/1:17,0:17:44.89:447,45,0	0/0:10,0:9:17.98:0,18,168	0/0:7,0:5:2.78:0,3,37	0/0:30,0:30:77.92:0,78,918	0/1:13,0:13:11.29:11,0,203	0/0:23,0:23:68.91:0,69,704	1/1:39,0:39:99:922,108,0	0/0:12,0:12:32.83:0,33,334	0/0:17,0:17:49.64:0,50,514	0/0:26,0:26:78:0,78,843	0/0:15,0:15:33.65:0,34,272	0/0:12,0:12:20.34:0,20,178	0/0:20,0:20:44.44:0,44,325	0/0:15,0:15:26.89:0,27,304	1/1:17,4:21:50.94:754,51,0	0/1:20,0:18:26.71:27,0,210	0/0:14,0:14:35.90:0,36,326	1/1:21,0:15:34.21:308,34,0	1/1:26,0:22:51.01:513,51,0	1/1:17,0:17:39.01:404,39,0	0/0:16,0:16:48:0,48,571	0/0:21,0:19:44.03:0,44,286	0/0:19,0:18:40.07:0,40,272	0/0:20,0:20:41.97:0,42,390	0/0:26,0:26:66.06:0,66,802	1/1:24,0:22:56.89:523,57,0	1/1:28,0:27:65.16:664,65,0
chr10	42634821	.	TA	T	2610.88	PASS	AB=0.706;AC=12;AF=0.214;AN=56;BaseQRankSum=0.140;DP=642;FS=1.223;HRun=10;HaplotypeScore=121.5548;InbreedingCoeff=0.8058;MQ=81.04;MQ0=0;MQRankSum=2.911;QD=15.27;ReadPosRankSum=6.093;VQSLOD=3.1947;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:29:45.37:0,45,235	0/0:5,0:11:28.23:0,28,159	0/1:25,4:27:58.33:58,0,265	0/0:19,1:20:5.24:0,5,247	0/0:7,0:30:69.77:0,70,390	0/0:19,1:20:25.02:0,25,475	0/0:23,0:23:63.14:0,63,674	0/0:20,0:26:56.69:0,57,314	0/0:27,1:30:34.36:0,34,670	0/0:24,0:24:57.15:0,57,630	0/0:25,1:26:39.95:0,40,650	1/1:1,13:14:29.99:260,30,0	1/1:2,33:35:80.97:703,81,0	1/1:4,15:19:29.99:260,30,0	0/0:25,2:27:49.14:0,49,762	0/0:6,0:18:40.32:0,40,217	0/0:35,1:36:76.22:0,76,1069	0/0:10,0:10:27.07:0,27,298	0/0:13,0:13:34.80:0,35,204	0/0:20,0:33:73.41:0,73,419	0/0:7,0:12:11.24:0,11,59	1/1:6,24:30:71.96:625,72,0	1/1:1,18:20:53.02:449,53,0	0/1:3,20:24:1.26:436,0,1	0/0:19,0:19:40.94:0,41,567	0/0:25,0:26:74.71:0,75,767	0/0:21,0:30:61.99:0,62,321	0/0:4,0:7:14.76:0,15,101
chr10	42635221	.	G	GA	970.98	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-3.482;DP=668;FS=9.181;HRun=5;HaplotypeScore=81.4259;InbreedingCoeff=0.9997;MQ=90.24;MQ0=0;MQRankSum=-3.953;QD=32.37;ReadPosRankSum=0.848;VQSLOD=3.8001;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:66.14:0,66,709	0/0:13,0:13:39.08:0,39,411	0/0:26,0:26:60.12:0,60,632	0/0:26,0:26:56.98:0,57,642	1/1:1,29:30:81.26:1066,81,0	0/0:36,0:36:99:0,102,1087	0/0:21,0:21:60.13:0,60,636	0/0:34,0:34:87.20:0,87,921	0/0:27,0:27:72.17:0,72,766	0/0:33,0:33:87.22:0,87,935	0/0:15,0:15:42.11:0,42,451	0/0:14,0:14:36.09:0,36,387	0/0:23,0:23:69.16:0,69,734	0/0:18,0:18:54.14:0,54,580	0/0:29,0:29:87.20:0,87,927	0/0:23,0:23:66.17:0,66,709	0/0:23,0:23:69.17:0,69,741	0/0:22,0:22:63.16:0,63,676	0/0:32,0:32:80.46:0,80,855	0/0:29,0:29:69.16:0,69,733	0/0:20,0:20:57.14:0,57,613	0/0:23,0:23:63.16:0,63,677	0/0:21,0:21:57.13:0,57,604	0/0:17,0:17:48.12:0,48,516	0/0:17,0:17:51.10:0,51,532	0/0:21,0:21:54.13:0,54,581	0/0:34,0:34:87.21:0,87,934	0/0:16,0:16:48.12:0,48,516
chr10	42636039	.	TA	T	9039.74	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=16.716;DP=488;FS=2.386;HRun=3;HaplotypeScore=62.9910;InbreedingCoeff=0.9834;MQ=64.88;MQ0=0;MQRankSum=-0.529;QD=37.05;ReadPosRankSum=3.440;VQSLOD=5.4254;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:90.28:0,90,1347	0/0:7,0:7:21.07:0,21,321	0/0:7,0:7:19.30:0,19,247	0/0:3,0:2:5.99:0,6,83	1/1:0,16:16:48.02:586,48,0	0/0:24,0:24:72.21:0,72,1053	0/0:20,0:20:60.19:0,60,897	0/0:31,0:31:90.26:0,90,1273	0/0:9,0:9:27.09:0,27,412	1/1:1,24:25:75.19:987,75,0	1/1:0,23:23:63.12:826,63,0	1/1:0,14:14:33.11:460,33,0	1/1:0,16:16:39.13:545,39,0	1/1:0,11:11:24.04:313,24,0	1/1:0,17:17:48.16:671,48,0	0/0:21,0:21:63.15:0,63,876	1/1:0,21:21:57.19:796,57,0	1/1:0,14:14:42.14:586,42,0	0/0:21,0:21:60.18:0,60,854	0/0:21,0:21:63.17:0,63,898	0/0:8,0:8:24.08:0,24,364	1/1:0,10:10:30.01:375,30,0	1/1:0,17:17:48.06:624,48,0	1/1:0,12:12:33.11:461,33,0	1/1:0,24:24:60.20:836,60,0	1/1:0,24:24:72.22:972,72,0	0/0:25,0:25:75.25:0,75,1130	0/0:17,0:17:51.15:0,51,757
chr10	42636211	.	A	ATTC	8145.16	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-2.201;DP=645;FS=2.629;HRun=0;HaplotypeScore=120.4286;InbreedingCoeff=0.9996;MQ=98.79;MQ0=0;MQRankSum=-2.555;QD=51.23;ReadPosRankSum=2.394;VQSLOD=6.6022;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,35:40:90.31:1963,90,0	0/0:12,0:12:33.07:0,33,494	0/0:34,0:34:74.28:0,74,1135	0/0:35,0:35:78.18:0,78,1188	0/0:22,0:22:63.21:0,63,992	0/0:19,0:19:48.16:0,48,759	0/0:27,0:27:78.23:0,78,1210	0/0:27,0:27:60.20:0,60,948	0/0:15,0:15:42.14:0,42,666	0/0:28,0:28:84.28:0,84,1310	0/0:20,0:20:54.18:0,54,851	1/1:1,19:21:60.14:1262,60,0	1/1:3,15:18:45.09:933,45,0	1/1:1,16:17:51.12:1067,51,0	0/0:19,0:19:54.17:0,54,831	0/0:26,0:26:78.25:0,78,1214	0/0:25,0:25:66.19:0,66,1000	0/0:13,0:13:36.12:0,36,570	0/0:21,0:21:57.14:0,57,851	0/0:28,0:28:75.21:0,75,1161	0/0:29,0:29:81.28:0,81,1274	1/1:1,10:12:30.10:628,30,0	1/1:2,16:18:42.14:917,42,0	1/1:7,25:33:63.21:1376,63,0	0/0:26,0:26:63.15:0,63,910	0/0:26,0:26:75.26:0,75,1189	0/0:24,0:24:66.22:0,66,1042	0/0:10,0:10:27.09:0,27,428
chr10	42636351	.	GGTGAAGGCTTCCCATTAGAA	G	9213.42	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=11.844;DP=588;FS=11.772;HRun=0;HaplotypeScore=328.0073;InbreedingCoeff=0.9898;MQ=84.08;MQ0=0;MQRankSum=-10.223;QD=95.97;ReadPosRankSum=3.733;VQSLOD=3.3253;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,126,10546	0/0:6,0:6:18.06:0,18,1323	0/0:14,0:14:36.12:0,36,2283	0/0:26,0:26:62.97:0,63,3827	0/0:25,0:25:63.22:0,63,4820	0/0:18,0:18:51.18:0,51,4422	0/0:25,0:25:72.25:0,72,5567	0/0:21,0:21:60.21:0,60,4446	0/0:19,0:19:57.20:0,57,4951	1/1:3,14:17:33.11:1869,33,0	1/1:7,6:13:12.04:680,12,0	0/0:23,0:23:66.23:0,66,5417	0/0:18,0:18:48.16:0,48,4348	0/0:21,0:21:60.21:0,60,5199	1/1:4,13:17:30.10:1699,30,0	0/0:17,0:17:48.16:0,48,4249	0/0:35,0:35:99:0,105,9085	1/1:3,8:11:18.06:1020,18,0	0/0:14,0:14:39.13:0,39,2552	0/0:19,0:19:54.17:0,54,3364	0/0:44,0:44:99:0,129,11381	0/0:21,0:21:60.19:0,60,4839	0/0:19,0:19:45.15:0,45,3662	0/0:30,0:30:90.31:0,90,8241	1/1:5,13:17:33.11:1869,33,0	1/1:6,14:20:42.14:2077,42,0	0/0:25,0:25:72.25:0,72,6208	0/0:8,0:8:24.08:0,24,2320
chr10	42636709	.	C	CTTGCCTT	20349.54	PASS	AB=1.000;AC=42;AF=0.750;AN=56;BaseQRankSum=16.644;DP=532;FS=4.994;HRun=0;HaplotypeScore=271.8668;InbreedingCoeff=0.5355;MQ=92.22;MQ0=0;MQRankSum=-16.680;QD=49.39;ReadPosRankSum=7.338;VQSLOD=3.9058;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:31,0:31:33.34:1462,33,0	1/1:9,0:9:27.09:621,27,0	0/0:38,0:38:99:0,114,2582	0/0:24,0:24:72.07:0,72,1550	1/1:24,0:24:50.53:996,51,0	0/0:19,0:19:57.20:0,57,1526	0/0:22,0:22:63.22:0,63,1750	0/1:19,0:19:54.23:611,0,54	0/0:17,0:17:51.16:0,51,1366	1/1:16,0:16:48.16:966,48,0	1/1:21,0:22:58.41:1201,58,0	1/1:24,0:24:22.50:1113,22,0	1/1:24,0:24:45.50:1378,46,0	1/1:18,0:18:0.67:743,1,0	1/1:24,1:25:45.10:1382,45,0	1/1:8,7:15:41.82:1202,42,0	0/1:12,0:12:59.85:394,0,60	0/1:4,0:4:14.95:123,0,15	0/1:18,0:18:26.72:694,0,27	1/1:18,0:18:2.11:928,2,0	1/1:10,0:10:16.67:194,17,0	1/1:15,0:15:45.15:1011,45,0	1/1:14,0:14:35.54:696,36,0	1/1:16,0:16:33.42:491,33,0	1/1:22,0:22:56.77:1088,57,0	1/1:23,0:23:42.09:1268,42,0	1/1:31,0:31:62.18:1717,62,0	1/1:2,0:2:3.90:70,4,0
chr10	42636712	.	G	GCCTTCTGATGTCCA	81629.45	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-4.658;DP=658;FS=6.780;HRun=0;HaplotypeScore=225.0382;InbreedingCoeff=0.9732;MQ=84.99;MQ0=0;MQRankSum=-16.169;QD=152.86;ReadPosRankSum=4.067;VQSLOD=4.4791;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:17,17:37:99:6082,102,0	1/1:3,8:11:33.11:2312,33,0	0/0:39,0:39:99:0,102,3797	0/0:24,0:24:65.97:0,66,2134	1/1:17,14:33:71.71:3927,72,0	0/0:20,0:20:60.18:0,60,2284	0/0:23,0:23:69.24:0,69,2737	1/1:20,3:31:90.25:4033,90,0	0/0:18,0:18:54.17:0,54,2101	1/1:14,9:24:72.25:4328,72,0	1/1:4,18:26:60.16:3909,60,0	1/1:17,12:33:84.25:5024,84,0	1/1:16,13:30:87.26:5614,87,0	1/1:10,10:21:57.12:3327,57,0	1/1:15,18:36:93.27:5681,93,0	1/1:16,0:23:66.23:4079,66,0	1/1:4,7:14:27.09:1795,27,0	1/1:5,1:7:18.06:1045,18,0	1/1:9,6:19:54.17:2796,54,0	1/1:9,13:22:60.16:3738,60,0	1/1:6,3:13:23.99:952,24,0	1/1:8,15:24:57.19:3774,57,0	1/1:8,9:17:45.07:2541,45,0	1/1:8,10:19:33.40:1680,33,0	1/1:11,13:27:69.11:3941,69,0	1/1:10,18:30:81.26:4993,81,0	1/1:10,20:35:90.27:5830,90,0	1/1:1,1:2:5.98:232,6,0
chr10	42637681	.	TG	T	7736.16	PASS	AB=0.533;AC=17;AF=0.304;AN=56;BaseQRankSum=7.092;DP=693;FS=15.427;HRun=2;HaplotypeScore=101.3453;InbreedingCoeff=0.9425;MQ=85.87;MQ0=0;MQRankSum=-6.235;QD=36.15;ReadPosRankSum=1.265;VQSLOD=3.3167;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,108,1552	0/0:6,0:6:18.06:0,18,269	0/0:20,0:20:60.18:0,60,862	0/0:26,0:26:73.77:0,74,1052	1/1:1,22:23:63.14:796,63,0	0/0:33,0:33:96.23:0,96,1391	0/0:36,0:36:99:0,105,1495	1/1:1,32:33:96.29:1218,96,0	0/0:31,0:31:90.28:0,90,1307	0/0:33,0:33:99:0,99,1481	0/0:16,0:16:45.15:0,45,673	0/0:24,0:24:72.24:0,72,1057	0/0:21,0:21:63.17:0,63,919	0/0:33,0:33:99:0,99,1459	0/0:31,0:31:90.24:0,90,1250	0/1:2,14:16:2.83:464,0,3	1/1:0,25:25:72.23:935,72,0	0/0:18,0:18:54.13:0,54,764	1/1:0,22:22:66.19:840,66,0	1/1:0,22:22:66.15:835,66,0	1/1:1,49:50:99:1830,141,0	0/0:15,0:15:42.14:0,42,629	0/0:23,0:23:69.23:0,69,1033	0/0:18,0:18:54.12:0,54,744	0/0:21,0:21:63.20:0,63,926	0/0:37,0:37:99:0,111,1643	1/1:1,16:17:45.15:584,45,0	1/1:0,6:6:18.06:234,18,0
chr10	42638035	.	TACACACACACATACAC	T	4587.40	PASS	AB=0.939;AC=30;AF=0.556;AN=54;BaseQRankSum=-2.938;DP=597;FS=5.219;HRun=0;HaplotypeScore=244.3840;InbreedingCoeff=0.4187;MQ=68.78;MQ0=20;MQRankSum=0.163;QD=11.38;ReadPosRankSum=3.151;VQSLOD=3.1878;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:39,0:39:25.16:455,25,0	0/0:9,0:9:15.04:0,15,482	0/0:39,0:27:40.31:0,40,378	0/0:33,0:16:24.06:0,24,263	0/0:18,0:18:21.01:0,21,304	0/0:18,0:18:35.28:0,35,1295	0/0:22,0:22:44.81:0,45,797	1/1:25,0:25:38.65:278,39,0	0/0:24,0:24:63.05:0,63,1789	0/1:19,0:17:66.92:67,0,270	0/1:11,0:11:33.91:34,0,105	1/1:18,0:18:35.92:330,36,0	1/1:14,0:14:32.83:347,33,0	1/1:13,0:16:32.99:461,33,0	0/1:24,0:24:38.59:39,0,191	0/0:29,0:29:9.02:0,9,94	1/1:34,0:35:21.28:408,21,0	0/1:15,0:16:42.19:42,0,291	1/1:18,0:18:24.51:286,25,0	1/1:10,2:12:17.98:256,18,0	1/1:32,0:31:14.27:471,14,0	0/1:16,0:17:15.37:165,0,15	0/1:3,0:11:0:0,0,0	1/1:37,1:39:53.70:448,54,0	0/1:20,0:20:65.04:65,0,171	0/1:16,0:15:94.84:165,0,95	1/1:2,18:19:5.22:270,5,0	./.
chr10	42638037	.	CACACACACAT	C	6010.78	PASS	AB=1.000;AC=37;AF=0.685;AN=54;BaseQRankSum=1.915;DP=593;FS=7.973;HRun=0;HaplotypeScore=179.8284;InbreedingCoeff=0.8641;MQ=66.38;MQ0=20;MQRankSum=-0.509;QD=14.55;ReadPosRankSum=3.963;VQSLOD=3.1909;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:39,0:39:80.77:640,81,0	0/0:9,0:9:15.04:0,15,251	0/0:37,0:25:40.07:0,40,378	0/0:32,0:15:24.73:0,25,265	0/0:21,0:21:20.82:0,21,165	0/0:18,0:18:36.05:0,36,904	0/0:25,0:25:45.04:0,45,556	1/1:25,0:25:38.65:278,39,0	0/0:24,0:24:63.03:0,63,1228	0/1:19,0:17:5.69:231,0,6	1/1:10,1:11:14.66:148,15,0	1/1:18,0:18:38.92:328,39,0	1/1:14,0:14:32.83:310,33,0	1/1:16,0:16:35.78:324,36,0	1/1:21,3:24:41.07:536,41,0	1/1:30,0:30:9.50:117,10,0	1/1:34,0:34:64.46:534,64,0	1/1:16,0:16:17.46:196,17,0	1/1:16,0:16:35.89:297,36,0	1/1:11,0:11:17.98:196,18,0	1/1:32,0:31:41.85:485,42,0	1/1:17,0:17:26.16:199,26,0	0/0:12,0:11:0.47:0,0,1	1/1:36,0:36:53.79:432,54,0	1/1:19,0:19:34.35:319,34,0	1/1:16,0:15:35.43:289,35,0	1/1:20,0:18:5.70:151,6,0	./.
chr10	42638039	.	CACACACAT	C	5750.86	PASS	AB=1.000;AC=36;AF=0.667;AN=54;BaseQRankSum=1.531;DP=576;FS=6.816;HRun=0;HaplotypeScore=158.3958;InbreedingCoeff=0.8034;MQ=63.20;MQ0=20;MQRankSum=-1.893;QD=14.38;ReadPosRankSum=3.088;VQSLOD=3.3895;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:37,0:37:80.77:640,81,0	0/0:7,0:7:15.01:0,15,147	0/0:35,0:23:34.30:0,34,371	0/0:30,0:13:23.18:0,23,261	0/0:21,0:21:20.97:0,21,195	0/0:18,0:18:36.03:0,36,744	0/0:27,0:27:45.56:0,46,499	1/1:22,0:22:38.65:278,39,0	0/0:24,0:24:63.03:0,63,1004	0/1:19,0:17:5.17:217,0,5	1/1:11,0:11:11.55:104,12,0	1/1:17,0:17:38.91:320,39,0	1/1:14,0:14:32.83:296,33,0	1/1:16,0:16:35.03:295,35,0	1/1:24,0:24:20.30:398,20,0	1/1:2,27:29:9.03:233,9,0	1/1:33,0:33:63.56:520,64,0	0/1:16,0:16:4.67:156,0,5	1/1:15,0:15:35.93:300,36,0	1/1:11,0:11:17.98:182,18,0	1/1:31,0:30:53.90:497,54,0	1/1:17,0:17:26.45:204,26,0	0/0:12,0:11:0.47:0,0,1	1/1:35,0:35:53.81:433,54,0	1/1:19,0:19:35.90:293,36,0	1/1:15,0:14:32.68:264,33,0	1/1:19,0:17:6.17:123,6,0	./.
chr10	42638045	.	CAT	C	5695.12	PASS	AB=1.000;AC=39;AF=0.722;AN=54;BaseQRankSum=2.337;DP=548;FS=9.953;HRun=0;HaplotypeScore=106.0285;InbreedingCoeff=0.8458;MQ=56.22;MQ0=23;MQRankSum=-1.091;QD=13.79;ReadPosRankSum=1.871;VQSLOD=3.8465;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:36,0:36:81.94:642,82,0	0/0:6,0:6:13.06:0,13,85	0/0:29,0:18:34.64:0,35,372	0/0:28,0:11:24.06:0,24,263	0/0:20,0:20:20.97:0,21,192	0/0:17,0:17:36.71:0,37,361	0/1:29,0:29:2.04:2,0,343	1/1:2,13:15:38.65:278,39,0	0/0:22,0:22:51.42:0,51,490	1/1:13,9:20:42.21:357,42,0	1/1:11,0:11:20.31:149,20,0	1/1:17,1:18:38.91:320,39,0	1/1:10,1:11:32.80:255,33,0	1/1:16,1:16:33.52:243,34,0	1/1:26,0:26:2.84:297,3,0	1/1:27,1:28:8.78:54,9,0	1/1:26,0:26:66.15:526,66,0	1/1:14,0:14:36.11:264,36,0	1/1:13,0:13:36.40:302,36,0	1/1:11,0:10:17.92:140,18,0	1/1:30,0:28:65.87:533,66,0	1/1:17,0:17:25.77:200,26,0	0/0:10,0:9:0.47:0,0,1	1/1:34,0:34:53.87:432,54,0	1/1:17,0:17:41.87:336,42,0	1/1:18,0:17:33.63:324,34,0	1/1:20,0:18:6.49:41,6,0	./.
chr10	42638047	.	TACACACACAC	T	649.20	PASS	AB=1.000;AC=20;AF=0.417;AN=48;BaseQRankSum=6.192;DP=574;FS=7.937;HRun=0;HaplotypeScore=191.5593;InbreedingCoeff=0.1850;MQ=53.56;MQ0=25;MQRankSum=-3.662;QD=2.30;ReadPosRankSum=2.760;VQSLOD=1.9790;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:5.80:0,6,46	0/0:4,0:7:12.02:0,12,170	./.	./.	0/0:15,7:22:3.34:0,3,29	0/0:16,0:16:23.94:0,24,769	0/0:30,0:30:23.98:0,24,320	./.	0/0:22,0:23:30.10:0,30,833	0/0:22,0:20:10.22:0,10,87	0/1:14,0:14:29.60:30,0,43	1/1:20,0:19:2.73:26,3,0	1/1:11,0:11:3.01:68,3,0	1/1:17,0:16:10.28:102,10,0	0/1:33,0:33:99:201,0,206	1/1:28,0:28:9.38:66,9,0	0/1:27,0:27:17.20:42,0,17	0/1:16,0:17:5.38:5,0,118	0/1:13,0:13:0.20:0,0,0	1/1:13,0:12:3.01:67,3,0	0/0:32,0:30:2.97:0,3,48	0/1:18,0:18:8.31:8,0,11	0/0:10,0:9:0.47:0,0,1	0/1:33,0:33:0.08:1,0,0	0/1:17,0:17:35.52:46,0,36	0/0:19,0:18:0.38:0,0,22	1/1:21,0:18:3.70:130,4,0	./.
chr10	42638270	.	AGAAAGGAAAG	A	1442.63	PASS	AB=1.000;AC=21;AF=0.389;AN=54;BaseQRankSum=-2.405;DP=610;FS=12.108;HRun=0;HaplotypeScore=268.6155;InbreedingCoeff=0.5595;MQ=73.36;MQ0=12;MQRankSum=-1.739;QD=5.94;ReadPosRankSum=-0.515;VQSLOD=0.9672;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:26:9.03:163,9,0	0/0:8,0:8:0.89:0,1,2	0/0:34,0:27:0:0,0,0	./.	1/1:26,0:26:6.21:24,6,0	0/0:16,0:16:15.05:0,15,526	0/0:22,0:22:12.03:0,12,248	0/0:25,0:23:0:0,0,0	0/0:35,0:35:54.15:0,54,1241	0/0:21,0:21:3.84:0,4,20	0/0:10,0:10:7.76:0,8,77	0/0:14,0:14:4.78:0,5,23	0/0:11,0:11:8.16:0,8,44	0/0:17,0:17:1.88:0,2,8	0/0:23,0:23:10.12:0,10,52	1/1:25,8:33:3.01:87,3,0	0/1:20,0:20:99:158,0,257	1/1:15,0:15:4.76:116,5,0	1/1:22,0:19:6.02:140,6,0	1/1:16,13:29:18.06:377,18,0	1/1:20,0:20:8.93:66,9,0	0/0:11,0:11:1.35:0,1,3	0/0:11,0:11:0.89:0,1,2	1/1:15,0:15:8.96:131,9,0	0/0:28,0:28:17.03:0,17,96	0/0:22,0:22:11.59:0,12,70	1/1:18,8:25:7.33:258,7,0	1/1:2,7:9:3.01:87,3,0
chr10	42638301	.	GAA	G	1729.55	PASS	AB=0.833;AC=12;AF=0.231;AN=52;BaseQRankSum=8.880;DP=523;FS=8.713;HRun=3;HaplotypeScore=191.5625;InbreedingCoeff=-0.3113;MQ=43.39;MQ0=21;MQRankSum=-9.626;QD=9.01;ReadPosRankSum=2.627;VQSLOD=-0.1287;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:28:81.23:0,81,1241	0/0:9,0:9:21.07:0,21,316	./.	./.	0/0:20,0:19:23.33:0,23,430	0/0:19,0:19:57.19:0,57,943	0/0:22,0:21:56.58:0,57,951	0/0:31,0:23:66.22:0,66,1009	0/0:32,0:31:90.31:0,90,1558	0/1:12,3:14:99:116,0,184	0/1:10,2:11:99:101,0,209	0/1:14,2:16:99:133,0,367	0/1:10,3:13:79.05:79,0,323	0/1:15,2:17:99:158,0,308	0/1:13,6:19:99:234,0,307	0/0:30,0:30:61.95:0,62,1018	0/0:21,0:21:4.78:0,5,552	0/1:8,1:13:99:120,0,111	0/0:18,0:11:32.99:0,33,466	0/0:30,0:30:60.01:0,60,882	0/0:18,0:18:51.17:0,51,799	0/1:15,4:19:99:201,0,323	0/1:10,4:14:99:191,0,165	0/1:8,3:11:56.48:56,0,201	0/1:18,6:24:99:277,0,364	0/1:15,4:19:99:211,0,325	0/0:20,0:19:23.94:0,24,539	0/0:12,0:12:10.79:0,11,222
chr10	42638302	.	AAAG	A	2597.47	PASS	AB=0.896;AC=14;AF=0.269;AN=52;BaseQRankSum=8.114;DP=515;FS=5.715;HRun=0;HaplotypeScore=192.3638;InbreedingCoeff=-0.3791;MQ=43.48;MQ0=22;MQRankSum=-10.106;QD=11.70;ReadPosRankSum=2.769;VQSLOD=2.6414;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:28:81.27:0,81,1220	0/0:8,0:8:21.07:0,21,311	./.	./.	0/1:21,0:20:16.34:16,0,238	0/0:19,0:19:57.19:0,57,978	0/0:23,0:23:64.34:0,64,999	0/0:33,0:25:75.25:0,75,1103	0/0:31,0:30:90.31:0,90,1767	0/1:11,2:12:99:174,0,107	0/1:10,2:11:99:174,0,128	0/1:14,2:16:99:185,0,223	0/1:12,0:12:99:115,0,189	0/1:11,5:16:99:265,0,192	0/1:17,2:19:99:379,0,157	0/0:30,0:30:56.56:0,57,943	0/1:21,0:21:13.02:13,0,453	0/1:9,0:9:59.85:84,0,60	0/0:18,0:11:32.92:0,33,435	0/0:30,0:30:50.26:0,50,800	0/0:18,0:18:51.17:0,51,747	0/1:16,3:19:99:294,0,194	0/1:10,3:13:96.85:326,0,97	0/1:9,2:11:53.09:53,0,124	0/1:19,3:22:99:392,0,208	0/1:15,3:18:99:277,0,184	0/0:19,0:18:8.13:0,8,495	0/0:12,0:12:5.42:0,5,208
chr10	42638315	.	GGA	G	1033.28	PASS	AB=0.858;AC=14;AF=0.250;AN=56;BaseQRankSum=10.417;DP=558;FS=13.661;HRun=0;HaplotypeScore=188.7598;InbreedingCoeff=-0.3314;MQ=43.27;MQ0=23;MQRankSum=-9.498;QD=4.38;ReadPosRankSum=-3.133;VQSLOD=1.5910;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:29:69.48:0,69,1227	0/0:7,0:9:18.50:0,18,314	0/0:17,0:4:12.04:0,12,184	0/0:30,0:6:6.91:0,7,89	0/1:20,0:19:12.57:13,0,531	0/0:19,0:19:57.19:0,57,958	0/0:23,0:22:41.61:0,42,982	0/0:37,0:29:86.93:0,87,1212	0/0:27,0:26:78.23:0,78,1371	0/1:15,3:16:80.25:80,0,315	0/1:10,2:11:54.43:54,0,263	0/1:15,2:17:37.21:37,0,398	0/1:9,3:12:87.76:88,0,319	0/1:12,2:14:40.35:40,0,372	0/1:15,5:20:99:152,0,391	0/0:28,0:28:56.32:0,56,923	0/1:20,0:21:99:112,0,456	0/1:8,2:10:40.68:41,0,190	0/0:21,0:13:39.02:0,39,546	0/0:29,0:29:54.54:0,55,786	0/0:15,0:15:45.15:0,45,705	0/1:19,4:23:99:155,0,498	0/1:9,4:13:99:106,0,141	0/1:8,2:10:4.48:4,0,234	0/1:18,6:24:99:199,0,412	0/1:18,4:22:99:104,0,425	0/0:20,0:19:28.14:0,28,562	0/0:15,0:15:20.20:0,20,341
chr10	42639647	.	ATG	A	1991.99	PASS	AB=0.882;AC=16;AF=0.286;AN=56;BaseQRankSum=-0.251;DP=753;FS=19.597;HRun=0;HaplotypeScore=156.1241;InbreedingCoeff=0.4123;MQ=59.13;MQ0=16;MQRankSum=2.038;QD=6.99;ReadPosRankSum=-1.448;VQSLOD=1.7039;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:40,0:39:24.91:70,0,25	0/0:5,0:5:11.66:0,12,112	0/0:33,0:16:6.02:0,6,79	0/0:27,0:20:2.80:0,3,13	0/0:24,0:26:12.92:0,13,267	0/0:34,1:36:44.31:0,44,1129	0/1:18,5:23:3.82:4,0,373	0/1:18,6:20:0.92:138,0,1	0/0:28,2:29:11.22:0,11,600	0/0:38,0:38:13.60:0,14,471	0/0:25,0:25:11.28:0,11,420	0/0:18,0:19:9.43:0,9,69	0/0:9,0:26:8.99:0,9,90	0/1:19,0:19:4.35:4,0,71	0/0:33,0:33:14.54:0,15,707	0/1:11,8:18:45.49:228,0,45	0/1:30,0:30:77.96:264,0,78	0/0:15,0:14:7.65:0,8,301	1/1:18,4:20:12.01:121,12,0	1/1:12,9:23:41.78:444,42,0	1/1:27,7:34:16.57:293,17,0	0/0:13,0:35:2.94:0,3,18	0/0:7,0:20:6.56:0,7,37	0/0:19,0:33:6:0,6,66	0/0:32,0:31:27.07:0,27,373	0/0:28,0:28:27.10:0,27,537	1/1:17,8:25:11.74:284,12,0	1/1:12,8:19:12.99:316,13,0
chr10	42639679	.	GTC	G	4215.11	PASS	AB=0.955;AC=30;AF=0.536;AN=56;BaseQRankSum=5.006;DP=686;FS=12.918;HRun=0;HaplotypeScore=155.5818;InbreedingCoeff=-0.1532;MQ=52.63;MQ0=18;MQRankSum=0.996;QD=7.46;ReadPosRankSum=-2.466;VQSLOD=3.6131;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:36,7:41:19.34:552,19,0	0/1:7,0:7:53.82:55,0,54	0/0:12,0:8:10.28:0,10,139	0/0:17,0:12:10.21:0,10,132	0/1:31,1:28:34.86:274,0,35	0/0:33,0:33:83.75:0,84,1440	0/0:29,0:28:55.70:0,56,720	0/1:28,0:23:0.61:1,0,271	0/0:29,0:28:65.02:0,65,953	0/1:30,3:33:99:338,0,140	0/1:23,0:23:99:178,0,150	1/1:18,0:18:18.73:133,19,0	1/1:24,0:24:2.33:144,2,0	1/1:23,1:23:18.81:198,19,0	0/1:34,2:35:99:294,0,247	0/1:22,0:21:52.65:298,0,53	0/1:5,26:31:37.51:617,0,38	0/1:15,1:15:99:99,0,105	0/1:13,0:11:3.01:3,0,120	0/1:32,0:32:52.45:52,0,317	0/1:29,0:29:35.96:36,0,131	1/1:25,0:25:29.51:228,30,0	1/1:16,0:16:21.90:161,22,0	1/1:24,0:23:2.70:181,3,0	0/1:22,0:21:80.60:81,0,124	0/1:24,1:24:99:174,0,117	0/1:26,0:23:50.08:50,0,154	0/1:16,0:15:42.99:69,0,43
chr10	42639695	.	GTCTA	G	9267.71	PASS	AB=0.983;AC=34;AF=0.607;AN=56;BaseQRankSum=-3.128;DP=712;FS=6.624;HRun=0;HaplotypeScore=185.4063;InbreedingCoeff=0.0867;MQ=65.27;MQ0=4;MQRankSum=-2.783;QD=15.98;ReadPosRankSum=-2.707;VQSLOD=3.3505;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:34,6:40:54.11:801,54,0	1/1:4,2:6:18.05:285,18,0	0/0:21,0:20:57.10:0,57,683	0/0:20,0:17:50.84:0,51,589	0/1:29,0:28:11.84:583,0,12	0/0:31,0:31:87.20:0,87,1753	0/0:30,0:30:66.14:0,66,1035	1/1:35,0:32:43.84:440,44,0	0/0:30,0:30:81.14:0,81,1533	0/1:35,1:36:20.11:938,0,20	0/1:25,0:25:99:355,0,113	1/1:18,0:18:29.03:306,29,0	1/1:21,0:21:17.14:449,17,0	1/1:23,0:22:13.18:297,13,0	0/1:39,0:38:99:665,0,222	0/1:19,3:22:35.51:605,0,36	1/1:32,2:33:59.18:526,59,0	0/1:15,1:16:12.23:263,0,12	1/1:12,0:11:0.26:22,0,0	0/1:42,0:42:10.77:159,0,11	0/1:22,0:22:33.34:33,0,39	1/1:27,0:27:49.78:688,50,0	1/1:15,0:15:20.01:380,20,0	1/1:24,0:23:23.29:481,23,0	0/1:26,0:25:22.12:442,0,22	0/1:29,0:28:35.59:480,0,36	0/1:26,0:26:18.27:58,0,18	0/1:13,0:13:11.13:11,0,34
chr10	42639773	.	AGTGT	A	8955.01	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=11.970;DP=1104;FS=0.690;HRun=0;HaplotypeScore=214.9525;InbreedingCoeff=0.9997;MQ=55.43;MQ0=22;MQRankSum=-1.342;QD=30.15;ReadPosRankSum=2.744;VQSLOD=4.6179;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,25:33:46.92:954,47,0	1/1:1,12:13:27.09:512,27,0	0/0:45,0:18:45.14:0,45,1005	0/0:30,0:18:48.08:0,48,1112	0/0:44,0:44:99:0,129,3283	0/0:27,0:26:69.18:0,69,1813	0/0:33,0:33:87.30:0,87,2224	1/1:2,34:21:60.19:1067,60,0	0/0:55,0:55:99:0,160,4142	0/0:75,0:75:99:0,214,5482	0/0:28,0:26:69.20:0,69,1746	0/0:35,0:34:83.83:0,84,2216	0/0:49,0:49:99:0,134,3351	0/0:39,0:39:96.31:0,96,2497	0/0:57,0:56:99:0,153,3875	1/1:1,43:44:78.05:1480,78,0	0/0:32,0:32:84.29:0,84,2242	0/0:29,0:29:84.06:0,84,1954	1/1:0,20:18:51.03:855,51,0	1/1:4,41:45:63.17:1158,63,0	1/1:12,50:62:87.30:1651,87,0	0/0:44,0:44:99:0,123,3113	0/0:33,0:33:93.30:0,93,2406	0/0:39,0:39:81.11:0,81,2143	0/0:44,0:44:99:0,111,2771	0/0:69,0:68:99:0,202,5187	1/1:1,31:32:44.99:768,45,0	1/1:0,10:10:27.09:510,27,0
chr10	42640163	.	ATGTATGTGTGTGTGTG	A	20351.80	PASS	AB=0.857;AC=25;AF=0.446;AN=56;BaseQRankSum=10.115;DP=1087;FS=16.135;HRun=0;HaplotypeScore=480.8328;InbreedingCoeff=0.9020;MQ=58.33;MQ0=8;MQRankSum=-11.506;QD=40.30;ReadPosRankSum=3.116;VQSLOD=2.1690;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:60,0:61:99:0,132,4664	0/0:17,0:17:51.13:0,51,3032	0/0:32,0:24:35.36:0,35,867	0/0:40,0:37:75.43:0,75,1735	0/0:28,0:27:62.93:0,63,2882	0/0:43,0:43:99:0,108,5725	0/0:35,0:34:96.17:0,96,3866	0/0:53,0:51:99:0,150,3635	0/0:37,0:36:87.19:0,87,4443	1/1:4,43:46:99:3524,123,0	1/1:4,36:37:30.48:1019,30,0	1/1:2,44:46:54.19:2439,54,0	1/1:1,45:49:56.98:2443,57,0	1/1:3,35:39:35.43:1387,35,0	1/1:5,62:67:63.08:2631,63,0	0/0:56,0:56:99:0,102,2358	1/1:1,25:26:24.08:1025,24,0	0/1:10,2:12:99:303,0,147	0/0:33,0:30:84.02:0,84,1424	0/0:42,0:42:89.59:0,90,2862	0/0:75,0:73:99:0,147,4345	1/1:4,29:34:21.33:856,21,0	1/1:1,25:28:9.49:407,9,0	1/1:2,41:43:5.76:280,6,0	1/1:2,30:32:15.52:589,16,0	1/1:1,40:40:99:3449,106,0	0/0:17,0:17:42.10:0,42,1453	0/0:13,0:13:26.79:0,27,685
chr10	42640167	.	ATGTG	A	8382.89	PASS	AB=0.737;AC=41;AF=0.732;AN=56;BaseQRankSum=8.318;DP=1086;FS=1.322;HRun=0;HaplotypeScore=342.9287;InbreedingCoeff=0.6661;MQ=56.91;MQ0=10;MQRankSum=-6.845;QD=9.55;ReadPosRankSum=1.695;VQSLOD=3.1936;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:36,19:58:18.37:1242,18,0	0/0:21,0:21:53.89:0,54,921	0/0:30,0:21:3.01:0,3,37	0/0:35,0:31:8.17:0,8,168	0/1:10,2:28:57.72:58,0,108	0/0:44,0:44:81.19:0,81,1690	0/0:35,0:36:53.84:0,54,976	1/1:53,3:54:9.06:622,9,0	0/0:39,0:39:63.13:0,63,1235	1/1:46,0:45:58.05:535,58,0	1/1:41,0:37:17.83:151,18,0	1/1:45,0:45:50.84:434,51,0	1/1:48,0:48:48.96:402,49,0	1/1:37,0:37:29.64:257,30,0	1/1:63,0:63:53.96:482,54,0	1/1:15,1:52:54.06:522,54,0	1/1:25,0:25:17.11:166,17,0	0/1:14,0:14:10.69:11,0,78	1/1:29,8:34:20.92:236,21,0	1/1:12,30:42:50.72:818,51,0	1/1:37,41:76:50.23:944,50,0	1/1:30,0:30:14.65:131,15,0	1/1:28,0:28:8.67:70,9,0	1/1:42,0:41:5.78:55,6,0	1/1:31,0:31:9.01:84,9,0	1/1:40,0:39:63.40:546,63,0	1/1:5,12:17:29.13:438,29,0	0/1:6,11:17:2.06:178,0,2
chr10	42641049	.	ATGTGTGTG	A	1435.64	PASS	AB=0.909;AC=23;AF=0.479;AN=48;BaseQRankSum=5.289;DP=735;FS=36.481;HRun=0;HaplotypeScore=193.0699;InbreedingCoeff=0.4236;MQ=63.71;MQ0=6;MQRankSum=-5.271;QD=3.99;ReadPosRankSum=0.318;VQSLOD=1.3636;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:33,0:36:2.99:23,3,0	1/1:10,0:12:9.03:167,9,0	./.	./.	0/0:17,0:18:5.92:0,6,59	0/0:20,0:19:22.25:0,22,214	0/1:22,0:25:38.69:39,0,379	0/1:28,0:27:1.82:20,0,2	1/1:23,1:26:8.81:106,9,0	0/1:34,1:34:62.17:67,0,62	1/1:19,1:21:3.01:56,3,0	0/0:29,0:29:42.14:0,42,1282	0/0:24,0:31:17.27:0,17,480	0/0:26,0:26:21.03:0,21,755	1/1:27,4:31:15.04:320,15,0	1/1:29,0:35:11.18:63,11,0	0/0:29,0:28:4.21:0,4,89	0/0:19,0:17:6.02:0,6,145	./.	1/1:24,3:27:8.23:156,8,0	./.	0/0:21,0:27:21.06:0,21,575	0/0:22,0:23:27.09:0,27,919	0/0:31,0:31:36.58:0,37,1135	1/1:20,6:27:9.03:205,9,0	0/1:27,4:31:99:191,0,103	1/1:14,1:15:3.01:75,3,0	0/1:7,1:9:99:118,0,124
chr10	42641164	.	CTTG	C	2470.88	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=3.372;DP=734;FS=18.117;HRun=0;HaplotypeScore=128.2794;InbreedingCoeff=0.9781;MQ=75.67;MQ0=14;MQRankSum=0.148;QD=10.98;ReadPosRankSum=1.487;VQSLOD=2.3269;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,22:34:20.20:256,20,0	1/1:3,8:10:6.02:88,6,0	0/0:49,0:41:72.17:0,72,1061	0/0:59,0:47:68.95:0,69,851	0/0:22,0:22:50.75:0,51,584	0/0:16,0:16:42.07:0,42,677	0/0:34,0:35:65.97:0,66,997	1/1:9,19:28:53.99:525,54,0	0/0:28,0:28:57.08:0,57,926	0/0:21,0:21:51.08:0,51,788	0/0:14,0:14:27.89:0,28,334	0/0:26,0:26:69.11:0,69,1073	0/0:24,0:24:66.08:0,66,1038	0/0:28,0:28:75.19:0,75,1258	0/0:31,0:31:69.08:0,69,1155	1/1:17,4:21:32.74:392,33,0	0/0:17,0:16:47.99:0,48,808	0/0:15,0:15:39.06:0,39,678	1/1:20,0:18:24.02:261,24,0	1/1:3,18:21:20.92:235,21,0	1/1:53,4:52:20.23:362,20,0	0/0:19,0:19:42.03:0,42,538	0/0:21,0:21:54.03:0,54,830	0/0:42,0:42:99:0,102,1739	0/0:20,0:20:30.96:0,31,714	0/0:22,0:22:54.12:0,54,872	1/1:18,4:22:38.87:419,39,0	1/1:8,2:10:14.89:144,15,0
chr10	42641197	.	G	GTGTGT	2441.58	PASS	AB=0.919;AC=19;AF=0.339;AN=56;BaseQRankSum=6.265;DP=679;FS=10.442;HRun=0;HaplotypeScore=164.2631;InbreedingCoeff=-0.1189;MQ=50.35;MQ0=43;MQRankSum=-3.360;QD=6.39;ReadPosRankSum=-1.168;VQSLOD=2.0366;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:34:99:112,0,171	0/1:12,0:11:2.71:45,0,3	0/0:41,0:13:35.85:0,36,397	0/0:32,0:8:9.08:0,9,228	0/0:10,0:18:33.11:0,33,479	0/0:8,0:17:31.77:0,32,308	0/0:27,0:38:0.46:0,0,544	0/1:16,0:14:97.34:111,0,97	0/1:15,1:29:67.46:67,0,347	0/1:21,0:21:99:230,0,373	0/1:11,0:16:14.08:14,0,145	0/0:27,0:26:48.16:0,48,675	0/0:22,0:21:58.38:0,58,866	0/0:27,0:27:54.18:0,54,772	0/1:27,1:28:99:322,0,400	0/1:24,2:27:0.93:423,0,1	0/1:24,0:22:67.87:68,0,320	0/1:15,0:12:33.19:33,0,251	0/1:9,0:7:17.89:18,0,39	0/1:15,0:15:5.86:84,0,6	0/1:30,0:49:81.84:82,0,88	0/0:14,0:14:41.44:0,41,513	0/0:19,0:19:36.07:0,36,507	0/0:41,0:41:86.97:0,87,1358	0/1:17,0:17:73.24:73,0,339	0/1:24,0:24:99:140,0,537	1/1:11,8:21:25.30:386,25,0	1/1:6,7:15:18.61:401,19,0
chr10	42641229	.	TGTGTGG	T	2648.64	PASS	AB=0.981;AC=16;AF=0.286;AN=56;BaseQRankSum=-0.145;DP=685;FS=5.545;HRun=0;HaplotypeScore=158.2632;InbreedingCoeff=-0.0913;MQ=63.94;MQ0=11;MQRankSum=-2.395;QD=8.00;ReadPosRankSum=-0.360;VQSLOD=2.3452;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:34:65.91:0,66,1216	0/0:7,0:7:9.03:0,9,235	0/0:33,0:18:39.94:0,40,418	0/0:32,0:20:33.96:0,34,457	0/1:12,0:12:22:129,0,22	0/0:21,0:21:41.89:0,42,687	0/0:34,0:34:74.76:0,75,1551	0/0:22,0:21:60.47:0,60,749	0/0:29,0:29:38.96:0,39,684	0/1:24,0:21:99:224,0,509	0/1:20,0:20:99:232,0,106	0/1:27,1:27:44.82:80,0,45	1/1:28,1:28:0.29:397,0,0	0/1:19,1:20:6.89:96,0,7	0/1:30,0:30:99:267,0,419	0/0:27,0:27:41.98:0,42,770	0/1:30,0:28:99:125,0,606	0/1:21,0:17:99:107,0,306	0/0:18,0:16:41.96:0,42,418	0/0:15,0:14:26.76:0,27,366	0/0:45,0:42:48.41:0,48,579	0/1:23,0:24:25.13:329,0,25	0/1:15,2:16:15.95:314,0,16	1/1:40,1:40:35.15:259,35,0	0/1:20,0:20:83.87:84,0,428	0/1:15,0:15:99:169,0,331	0/0:18,0:18:33.06:0,33,622	0/0:18,0:18:41.99:0,42,775
chr10	42641231	.	TGTGG	T	4260.45	PASS	AB=0.949;AC=19;AF=0.339;AN=56;BaseQRankSum=-1.681;DP=664;FS=3.356;HRun=0;HaplotypeScore=133.3263;InbreedingCoeff=0.3049;MQ=67.29;MQ0=10;MQRankSum=-1.904;QD=13.48;ReadPosRankSum=1.050;VQSLOD=4.3948;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:66.32:0,66,909	0/0:7,0:7:9.03:0,9,159	0/0:34,0:19:42.93:0,43,443	0/0:35,0:23:42.89:0,43,496	0/1:12,0:12:23.91:48,0,24	0/0:22,0:22:44.87:0,45,557	0/0:35,0:35:77.63:0,78,1246	0/0:22,0:21:62.99:0,63,679	0/0:26,0:26:38.98:0,39,490	0/1:24,0:21:99:224,0,266	0/1:19,0:19:27.88:252,0,28	0/1:4,20:23:2.65:111,0,3	1/1:20,6:25:62.88:746,63,0	1/1:1,18:19:11.98:185,12,0	0/1:30,0:30:99:315,0,221	0/0:24,0:24:42.46:0,42,616	0/1:29,0:27:99:153,0,338	0/1:20,0:17:99:147,0,181	0/0:17,0:15:41.92:0,42,365	0/0:15,0:14:26.97:0,27,315	0/0:41,0:38:42.38:0,42,427	1/1:20,2:23:58.24:619,58,0	1/1:15,2:16:37.71:426,38,0	1/1:2,35:37:36.12:729,36,0	0/1:21,0:21:99:138,0,201	0/1:15,0:15:99:169,0,162	0/0:19,0:19:36.01:0,36,474	0/0:17,0:17:44.88:0,45,572
chr10	42641726	.	GA	G	3178.61	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=12.873;DP=582;FS=2.174;HRun=9;HaplotypeScore=66.0939;InbreedingCoeff=0.9791;MQ=79.20;MQ0=0;MQRankSum=-0.690;QD=21.92;ReadPosRankSum=3.066;VQSLOD=4.6414;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:68.99:0,69,754	0/0:6,0:6:15.04:0,15,173	0/0:16,0:16:42.99:0,43,422	0/0:12,0:12:23.19:0,23,211	1/1:4,23:27:66.03:604,66,0	0/0:24,0:24:69.20:0,69,788	0/0:12,0:14:35.77:0,36,375	0/0:34,1:35:56.77:0,57,899	0/0:25,0:26:57:0,57,638	1/1:1,18:19:51.02:467,51,0	1/1:2,15:17:42.01:384,42,0	0/0:18,1:19:8.64:0,9,345	0/0:20,0:20:51.14:0,51,577	0/0:16,0:17:51.02:0,51,568	1/1:3,21:24:60.03:549,60,0	0/0:23,0:24:63.02:0,63,707	0/0:23,0:23:63.19:0,63,727	1/1:0,10:10:30.02:275,30,0	0/0:15,0:16:32.93:0,33,361	0/0:30,1:32:56.65:0,57,887	0/0:12,0:12:33.10:0,33,381	0/0:31,1:33:69.90:0,70,1029	0/0:15,1:16:11.63:0,12,377	0/0:19,0:19:51.09:0,51,564	1/1:5,21:26:60.02:549,60,0	1/1:2,20:22:60.03:549,60,0	0/0:28,0:28:84.25:0,84,969	0/0:14,0:14:42.05:0,42,450
chr10	42642536	.	ATGTGTGTG	A	2279.40	PASS	AB=0.625;AC=17;AF=0.304;AN=56;BaseQRankSum=-2.313;DP=506;FS=10.512;HRun=0;HaplotypeScore=147.2094;InbreedingCoeff=0.6929;MQ=57.99;MQ0=12;MQRankSum=-1.710;QD=14.90;ReadPosRankSum=0.027;VQSLOD=2.2809;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:18,3:21:20.73:323,21,0	1/1:4,1:4:6.02:123,6,0	0/0:11,0:11:5.97:0,6,69	0/0:22,0:16:9.03:0,9,198	0/0:18,0:17:15.52:0,16,475	0/0:17,0:17:19.31:0,19,292	0/0:12,0:12:18.06:0,18,349	1/1:19,9:26:27.03:516,27,0	0/0:13,0:23:6.02:0,6,138	0/0:22,0:22:39.13:0,39,1151	0/0:16,0:14:21.07:0,21,681	0/0:16,0:20:6.91:0,7,175	0/0:18,0:18:19.80:0,20,481	0/0:15,0:15:8.63:0,9,299	0/0:24,0:23:36.12:0,36,975	0/1:6,9:15:63.87:64,0,68	0/0:17,0:16:39.13:0,39,1142	0/0:13,0:13:9.03:0,9,274	1/1:13,0:14:12.23:247,12,0	1/1:20,3:22:7.47:726,7,0	1/1:24,1:22:2.88:76,3,0	0/0:18,0:18:2.16:0,2,190	0/0:15,0:15:18.06:0,18,525	0/0:24,0:25:18.03:0,18,384	0/0:15,0:15:24.08:0,24,796	0/0:30,0:30:57.20:0,57,1650	1/1:2,6:8:2.65:74,3,0	1/1:12,1:13:7.79:311,8,0
chr10	42642538	.	G	GTT	2587.99	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-3.784;DP=506;FS=17.216;HRun=1;HaplotypeScore=116.6992;InbreedingCoeff=0.8619;MQ=57.26;MQ0=12;MQRankSum=3.320;QD=21.04;ReadPosRankSum=3.164;VQSLOD=0.4811;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:50.58:0,51,438	0/0:5,0:4:9:0,9,83	0/0:10,0:9:27.02:0,27,275	0/0:22,0:16:48:0,48,505	0/0:18,0:17:28.08:0,28,222	0/0:18,0:18:41.95:0,42,390	0/0:12,0:12:33.29:0,33,263	0/0:27,0:25:74.86:0,75,627	0/0:25,0:24:32.77:0,33,253	1/1:15,8:24:8.78:532,9,0	1/1:17,0:15:33.84:442,34,0	0/0:20,0:20:22.53:0,23,200	0/0:17,0:17:9.36:0,9,80	0/0:15,0:15:2.25:0,2,23	1/1:23,0:22:25.36:580,25,0	0/0:15,0:15:14.80:0,15,118	0/0:17,0:16:15.13:0,15,119	1/1:2,11:14:7.27:100,7,0	0/0:15,0:15:35.28:0,35,314	0/0:23,0:22:60.01:0,60,593	0/0:24,0:21:32.83:0,33,271	0/0:18,0:18:11.90:0,12,95	0/0:15,0:15:8.97:0,9,85	0/0:26,0:26:26.29:0,26,192	1/1:14,0:14:30.48:383,30,0	1/1:8,22:31:9.07:726,9,0	0/0:8,0:8:8.81:0,9,71	0/0:12,0:11:23.37:0,23,206
chr10	42644222	.	G	GAA	4977.18	PASS	AB=0.767;AC=18;AF=0.321;AN=56;BaseQRankSum=-3.652;DP=705;FS=18.511;HRun=11;HaplotypeScore=146.6292;InbreedingCoeff=0.8559;MQ=72.31;MQ0=1;MQRankSum=-2.873;QD=19.37;ReadPosRankSum=0.041;VQSLOD=2.0620;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,3:49:82.78:414,83,0	0/1:1,0:8:11.12:33,0,11	0/1:18,0:18:6.18:6,0,266	0/0:20,0:20:27.31:0,27,263	0/0:21,0:29:27.65:0,28,420	0/0:18,0:18:41.90:0,42,407	0/0:21,0:25:50.21:0,50,492	0/0:22,0:24:41.56:0,42,428	0/0:21,0:21:46.70:0,47,457	0/0:1,0:26:65.80:0,66,286	0/0:2,0:13:27.43:0,27,119	1/1:6,17:25:42.14:592,42,0	1/1:2,19:22:35.56:463,36,0	1/1:4,13:19:35.09:450,35,0	0/0:2,0:23:54.89:0,55,239	0/0:21,0:26:59.17:0,59,574	1/1:7,23:34:41.27:832,41,0	0/0:1,0:34:87.30:0,87,377	0/0:15,0:18:35.23:0,35,286	0/0:23,0:26:23.82:0,24,300	0/0:18,0:19:47.77:0,48,448	1/1:7,16:23:42.01:509,42,0	1/1:3,16:19:25.88:330,26,0	1/1:2,36:40:93.31:1347,93,0	0/0:3,0:33:76.77:0,77,333	0/0:9,0:37:66.65:0,67,278	0/0:40,0:44:83.29:0,83,873	0/0:11,0:11:20.94:0,21,204
chr10	42644958	.	CA	C	15424.05	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=12.464;DP=688;FS=2.402;HRun=2;HaplotypeScore=69.6369;InbreedingCoeff=0.9997;MQ=86.76;MQ0=0;MQRankSum=-3.483;QD=36.12;ReadPosRankSum=3.616;VQSLOD=5.5194;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:0,43:43:99:1554,120,0	1/1:0,11:11:27.07:350,27,0	0/0:30,0:30:84.18:0,84,1149	0/0:15,0:15:42.11:0,42,603	1/1:0,29:29:87.28:1130,87,0	0/0:21,0:21:63.20:0,63,924	0/0:19,0:19:57.17:0,57,815	1/1:3,32:35:93.29:1194,93,0	0/0:21,0:21:63.21:0,63,944	1/1:0,26:26:78.22:984,78,0	1/1:0,25:25:66.21:844,66,0	0/0:26,0:26:72.23:0,72,1057	0/0:21,0:21:63.20:0,63,924	0/0:20,0:20:60.20:0,60,899	1/1:0,35:35:99:1364,105,0	1/1:2,17:19:51.17:662,51,0	0/0:26,0:26:78.26:0,78,1166	1/1:0,22:22:60.20:779,60,0	1/1:0,23:23:69.21:881,69,0	1/1:0,32:32:87.28:1125,87,0	1/1:0,33:33:87.28:1130,87,0	0/0:26,0:26:78.26:0,78,1168	0/0:23,0:23:69.23:0,69,1033	0/0:13,0:13:39.13:0,39,585	1/1:0,16:16:39.13:506,39,0	1/1:0,35:35:99:1363,105,0	1/1:0,31:31:93.30:1208,93,0	1/1:1,11:12:27.09:350,27,0
chr10	42645446	.	TC	T	3016.83	PASS	AB=0.612;AC=22;AF=0.393;AN=56;BaseQRankSum=20.675;DP=769;FS=0.000;HRun=2;HaplotypeScore=232.2717;InbreedingCoeff=0.2628;MQ=57.13;MQ0=1;MQRankSum=-18.184;QD=8.04;ReadPosRankSum=6.020;VQSLOD=0.9401;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:19,18:37:17.38:222,0,17	0/1:3,5:8:0.17:75,0,0	0/0:38,0:30:84.36:0,84,1238	0/0:40,0:37:99:0,110,1551	1/1:5,15:20:21.01:201,21,0	0/0:33,0:33:99:0,99,1478	0/0:36,0:36:99:0,105,1540	0/1:16,10:26:99:125,0,145	0/0:28,0:28:81.26:0,81,1179	0/1:7,24:31:8.60:305,0,9	0/1:4,11:15:58.35:97,0,58	0/0:38,0:38:99:0,111,1659	0/0:37,0:37:99:0,108,1604	0/0:32,0:32:96.32:0,96,1417	1/1:8,31:39:6.32:356,6,0	1/1:11,27:38:66.82:504,67,0	0/0:26,0:26:75.25:0,75,1115	0/1:5,8:13:22.34:91,0,22	0/1:4,4:7:16.25:49,0,16	0/1:3,20:23:12.95:214,0,13	1/1:23,5:28:3.54:116,4,0	0/0:30,0:30:87.29:0,87,1300	0/0:24,0:24:72.24:0,72,1070	0/0:32,0:32:96.32:0,96,1424	0/1:7,19:26:63.13:188,0,63	0/1:7,22:29:36.21:246,0,36	1/1:9,13:22:18.11:271,18,0	1/1:1,11:12:12.39:145,12,0
chr10	42645449	.	ATCCATCCATCC	A	20683.17	PASS	AB=0.692;AC=26;AF=0.464;AN=56;BaseQRankSum=21.830;DP=795;FS=6.047;HRun=0;HaplotypeScore=338.0360;InbreedingCoeff=0.5752;MQ=57.47;MQ0=1;MQRankSum=-18.233;QD=52.23;ReadPosRankSum=5.642;VQSLOD=3.6973;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:22,18:40:26.85:1464,27,0	1/1:2,5:7:18.06:503,18,0	0/0:40,0:32:96.32:0,96,4219	0/0:40,0:37:99:0,101,4626	1/1:6,15:21:50.95:1221,51,0	0/0:34,0:34:99:0,102,5524	0/0:37,0:37:99:0,108,5255	0/1:19,10:29:99:815,0,219	0/0:28,0:28:84.26:0,84,4088	0/1:8,24:32:36.11:2015,0,36	1/1:4,11:15:27.49:777,27,0	0/0:37,0:37:99:0,111,5966	0/0:36,0:36:99:0,108,5827	0/0:34,0:34:99:0,102,5304	1/1:11,31:42:99:2652,99,0	1/1:12,27:39:59.44:2539,59,0	0/0:24,0:24:72.25:0,72,3743	0/1:8,8:16:50.49:592,0,50	0/1:8,4:11:75.97:338,0,76	1/1:3,20:23:60.20:1591,60,0	0/1:20,5:25:3.64:466,0,4	0/0:31,0:31:90.30:0,90,4731	0/0:24,0:24:72.25:0,72,3470	0/0:34,0:34:99:0,102,5040	1/1:8,19:27:59.67:1646,60,0	0/1:9,22:31:73.61:1829,0,74	1/1:12,13:25:5.97:1239,6,0	1/1:1,11:12:36.12:996,36,0
chr10	42645972	.	C	CGTGT	3775.08	PASS	AB=0.874;AC=41;AF=0.788;AN=52;BaseQRankSum=-1.419;DP=665;FS=6.574;HRun=0;HaplotypeScore=148.2205;InbreedingCoeff=0.2398;MQ=63.32;MQ0=4;MQRankSum=1.265;QD=7.15;ReadPosRankSum=-0.395;VQSLOD=2.2322;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:32:4.37:4,0,63	1/1:12,0:14:2.33:12,2,0	./.	./.	1/1:21,0:21:3.01:31,3,0	0/1:15,0:20:3.49:3,0,60	0/0:29,0:32:40.56:0,41,492	1/1:23,0:23:10.78:107,11,0	0/0:27,0:27:7.18:0,7,265	0/1:28,0:29:56.73:109,0,57	1/1:14,5:20:2.89:70,3,0	1/1:13,3:22:2.71:70,3,0	1/1:13,4:18:13.40:284,13,0	1/1:20,3:25:12.04:280,12,0	1/1:26,3:32:27.16:360,27,0	1/1:14,9:27:4.50:80,4,0	0/0:14,0:26:2.99:0,3,75	1/1:15,7:23:22.79:459,23,0	1/1:29,0:28:17.97:227,18,0	1/1:11,2:15:2.90:70,3,0	1/1:36,0:36:21.06:312,21,0	1/1:13,0:13:6.02:114,6,0	1/1:9,0:12:5.75:81,6,0	0/1:16,6:30:48.15:275,0,48	1/1:17,3:24:11.07:107,11,0	0/1:16,8:26:16.45:416,0,16	1/1:22,3:27:8.99:142,9,0	1/1:4,0:7:9.03:161,9,0
chr10	42648428	.	G	GA	18161.18	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=10.487;DP=779;FS=1.477;HRun=1;HaplotypeScore=112.1724;InbreedingCoeff=0.9978;MQ=87.48;MQ0=0;MQRankSum=-1.836;QD=41.56;ReadPosRankSum=1.427;VQSLOD=4.6065;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,47:48:99:2113,141,0	1/1:1,16:17:45.62:676,46,0	0/0:25,0:25:69.21:0,69,875	0/0:29,0:29:81.25:0,81,1032	1/1:3,22:25:69.18:1004,69,0	0/0:21,0:21:60.19:0,60,777	0/0:27,0:27:81.25:0,81,1037	1/1:0,26:26:78.25:1148,78,0	0/0:28,0:28:84.27:0,84,1090	1/1:0,29:29:87.26:1263,87,0	1/1:1,22:23:66.18:964,66,0	0/0:29,0:29:87.28:0,87,1122	0/0:27,0:27:81.24:0,81,1034	0/0:31,0:31:93.28:0,93,1191	1/1:0,23:23:63.21:944,63,0	1/1:2,19:21:18.23:771,18,0	0/0:39,0:39:99:0,114,1462	1/1:1,27:28:78.26:1169,78,0	1/1:1,22:23:69.23:1034,69,0	1/1:1,30:31:87.29:1304,87,0	1/1:1,43:44:99:1844,123,0	0/0:30,0:30:84.25:0,84,1062	0/0:29,0:29:84.27:0,84,1091	0/0:27,0:27:78.25:0,78,1013	1/1:0,32:32:87.29:1304,87,0	1/1:2,26:28:81.25:1184,81,0	1/1:3,30:33:78.26:1169,78,0	1/1:0,6:6:18.06:270,18,0
chr10	42649732	.	A	AC	1239.48	PASS	AB=1.000;AC=11;AF=0.204;AN=54;BaseQRankSum=-3.130;DP=362;FS=3.507;HRun=2;HaplotypeScore=49.6813;InbreedingCoeff=0.8053;MQ=68.32;MQ0=1;MQRankSum=-2.271;QD=13.19;ReadPosRankSum=0.067;VQSLOD=2.4676;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:6:17.78:0,18,125	0/0:2,0:2:5.94:0,6,45	0/0:16,0:12:13.73:0,14,186	0/1:13,0:9:25.22:25,0,99	0/0:14,0:14:32.94:0,33,305	0/0:13,0:13:38.94:0,39,352	0/0:16,0:16:39.93:0,40,396	0/0:10,0:8:20.90:0,21,163	0/0:15,0:15:27.43:0,27,232	1/1:18,0:17:38.79:316,39,0	1/1:16,0:16:44.42:321,44,0	0/0:21,0:21:40.19:0,40,332	0/0:13,0:13:24.47:0,24,222	0/0:13,0:13:30.01:0,30,276	1/1:18,0:17:34.96:276,35,0	0/0:10,0:8:16.13:0,16,119	0/0:17,0:17:26.94:0,27,180	1/1:10,0:10:26.83:200,27,0	0/0:10,0:10:20.92:0,21,168	0/0:11,0:11:29.88:0,30,243	0/0:6,0:6:3:0,3,26	0/0:14,0:14:29.39:0,29,246	0/0:21,0:21:50.38:0,50,476	0/0:13,0:13:30.04:0,30,317	./.	1/1:2,15:19:35.33:276,35,0	0/0:8,0:8:17.63:0,18,123	0/0:6,0:6:8.17:0,8,53
chr10	42650066	.	TACATACATAC	T	6706.54	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=13.613;DP=830;FS=14.114;HRun=0;HaplotypeScore=240.3799;InbreedingCoeff=0.9290;MQ=56.15;MQ0=5;MQRankSum=-7.294;QD=29.67;ReadPosRankSum=-3.610;VQSLOD=2.3018;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,31:36:20.94:488,21,0	1/1:1,7:8:6.02:76,6,0	0/0:32,0:23:47.51:0,48,1363	0/0:43,0:21:38.99:0,39,1006	0/0:22,0:22:57.20:0,57,2690	0/0:28,0:28:79.15:0,79,3670	0/0:26,0:26:69.24:0,69,3135	1/1:11,30:41:90.29:2300,90,0	0/0:39,0:39:99:0,105,4668	0/0:47,0:45:99:0,120,5484	0/0:19,0:19:42.13:0,42,1781	0/0:30,0:30:78.27:0,78,3525	0/0:33,0:33:81.26:0,81,3450	0/0:29,0:29:72.25:0,72,3100	0/0:27,0:27:75.26:0,75,3480	1/1:6,20:26:15.05:470,15,0	0/0:31,0:30:90.31:0,90,3902	0/0:18,0:18:51.18:0,51,2356	1/1:4,14:17:5.65:738,6,0	1/1:4,31:35:45.08:1000,45,0	1/1:7,24:31:3.01:37,3,0	0/0:26,0:26:63.22:0,63,2531	0/0:37,0:37:87.30:0,87,3963	0/0:39,0:39:87.30:0,87,3974	0/0:38,0:38:75.23:0,75,3090	0/0:40,0:39:99:0,102,4913	1/1:1,19:20:39.13:1222,39,0	1/1:2,9:11:12.04:376,12,0
chr10	42650821	.	CT	C	12313	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=17.830;DP=792;FS=4.328;HRun=6;HaplotypeScore=95.6634;InbreedingCoeff=0.9912;MQ=83.53;MQ0=0;MQRankSum=-0.456;QD=28.37;ReadPosRankSum=1.521;VQSLOD=5.2215;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,52:54:99:1515,141,0	1/1:0,12:12:36.09:387,36,0	0/0:23,0:23:57.11:0,57,678	0/0:20,1:21:19.37:0,19,549	0/0:24,0:24:69.22:0,69,907	0/0:27,0:27:75.23:0,75,971	0/0:31,0:31:81.25:0,81,1050	1/1:6,24:30:72.16:766,72,0	0/0:27,0:27:81.26:0,81,1065	1/1:2,33:35:99:1064,99,0	1/1:0,27:27:75.19:805,75,0	0/0:25,0:25:72.23:0,72,947	0/0:30,0:30:87.28:0,87,1135	0/0:35,0:35:99:0,99,1273	1/1:1,38:39:99:1129,105,0	1/1:2,25:27:78.18:830,78,0	0/0:25,0:25:75.21:0,75,957	1/1:2,24:26:66.16:709,66,0	1/1:2,19:21:57.11:595,57,0	1/1:0,27:27:69.17:741,69,0	1/1:4,45:49:99:1322,123,0	0/0:33,0:33:90.25:0,90,1128	0/0:19,0:19:57.17:0,57,735	0/0:38,0:38:99:0,108,1420	1/1:0,29:29:78.20:838,78,0	1/1:2,24:26:69.16:742,69,0	1/1:1,26:27:72.18:772,72,0	1/1:1,4:5:9.02:97,9,0
chr10	42652801	.	TGG	T	8593.41	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=10.917;DP=687;FS=5.827;HRun=3;HaplotypeScore=83.0513;InbreedingCoeff=0.9831;MQ=91.67;MQ0=0;MQRankSum=-7.134;QD=40.92;ReadPosRankSum=1.096;VQSLOD=4.2334;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,46:46:99:1838,120,0	1/1:0,10:10:30.10:459,30,0	0/0:31,0:30:90.28:0,90,1613	0/0:31,0:31:88.16:0,88,1615	0/0:32,0:32:96.31:0,96,1820	0/0:20,0:20:60.21:0,60,1159	0/0:25,0:25:72.25:0,72,1381	1/1:2,32:34:96.31:1449,96,0	0/0:14,0:14:42.14:0,42,811	0/0:34,0:34:99:0,102,1898	0/0:18,0:18:54.18:0,54,1013	0/0:26,0:26:78.27:0,78,1507	0/0:21,0:21:63.22:0,63,1211	0/0:23,0:23:63.21:0,63,1186	0/0:25,0:25:72.25:0,72,1378	1/1:1,15:16:45.15:689,45,0	0/0:32,0:32:93.32:0,93,1797	0/0:9,0:9:24.08:0,24,464	1/1:0,16:16:48.15:713,48,0	1/1:0,19:19:54.18:827,54,0	1/1:1,36:37:93.32:1424,93,0	0/0:27,0:27:78.27:0,78,1487	0/0:18,0:18:51.17:0,51,985	0/0:24,0:24:69.24:0,69,1333	0/0:33,0:33:99:0,99,1893	0/0:31,1:32:50.37:0,50,1743	1/1:1,29:30:72.24:1103,72,0	1/1:0,2:2:6.02:92,6,0
chr10	42653825	.	GT	G	3043.36	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=10.358;DP=483;FS=4.105;HRun=10;HaplotypeScore=68.5701;InbreedingCoeff=0.9193;MQ=73.36;MQ0=0;MQRankSum=-0.168;QD=17.69;ReadPosRankSum=0.034;VQSLOD=4.3028;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,16:18:44.03:370,44,0	1/1:0,3:3:9:78,9,0	0/0:18,0:15:11.71:0,12,182	0/0:15,0:15:2.88:0,3,207	0/0:13,0:13:36.10:0,36,397	0/0:25,0:26:66.01:0,66,711	0/0:17,0:17:51.13:0,51,556	1/1:7,30:37:89.95:777,90,0	0/0:24,0:24:63.12:0,63,683	0/0:18,0:18:36.09:0,36,392	0/0:8,0:8:21.06:0,21,232	0/0:15,0:15:42.09:0,42,446	0/0:25,1:26:43.11:0,43,690	0/0:13,0:13:36.09:0,36,390	0/0:18,0:18:45.12:0,45,498	1/1:3,19:22:14.80:357,15,0	0/0:21,0:21:51.09:0,51,543	0/0:12,0:12:30.08:0,30,332	1/1:8,17:25:8.70:371,9,0	1/1:1,13:14:35.98:312,36,0	1/1:3,14:17:5.81:279,6,0	0/0:10,0:10:24.06:0,24,266	0/0:5,0:5:12.03:0,12,133	0/0:13,1:15:16.02:0,16,383	0/0:12,0:12:21.06:0,21,232	0/0:25,0:25:51.14:0,51,564	1/1:3,21:24:59.98:521,60,0	1/1:5,7:12:20.99:182,21,0
chr10	42653998	.	ATG	A	268.48	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=-3.644;DP=330;FS=0.000;HRun=0;HaplotypeScore=84.2056;InbreedingCoeff=-0.0004;MQ=61.67;MQ0=6;MQRankSum=1.276;QD=2.17;ReadPosRankSum=-3.045;VQSLOD=0.9110;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:8,5:13:12.04:148,12,0	0/1:6,0:6:10.13:10,0,14	0/0:14,0:7:5.96:0,6,44	0/0:13,0:7:6.47:0,6,57	0/0:4,0:4:5.99:0,6,48	0/0:15,0:15:42.07:0,42,580	0/0:11,0:11:18.01:0,18,220	0/1:28,0:28:88.06:103,0,88	0/0:9,0:9:18.03:0,18,245	0/0:12,0:12:25.90:0,26,158	0/0:11,0:11:20.26:0,20,121	0/0:7,0:7:6:0,6,52	0/0:7,0:7:9:0,9,86	0/0:7,0:7:9:0,9,77	0/0:12,0:12:11.58:0,12,74	0/1:11,0:11:9.03:9,0,73	0/0:15,0:14:13.97:0,14,130	0/0:14,0:14:26.01:0,26,145	0/1:16,0:15:7.37:7,0,22	0/1:17,0:17:23.22:88,0,23	0/1:14,0:14:9.13:9,0,23	0/0:2,0:2:2.99:0,3,24	0/0:8,0:8:9:0,9,79	0/0:4,0:4:3:0,3,26	0/0:10,0:10:11.38:0,11,75	0/0:20,0:19:42.89:0,43,253	0/0:10,0:10:16.26:0,16,66	0/1:19,0:19:28.79:29,0,69
chr10	42654000	.	G	GT	1593.53	PASS	AB=0.530;AC=9;AF=0.161;AN=56;BaseQRankSum=3.778;DP=329;FS=9.541;HRun=1;HaplotypeScore=79.3988;InbreedingCoeff=0.6083;MQ=64.63;MQ0=6;MQRankSum=-5.169;QD=20.70;ReadPosRankSum=2.922;VQSLOD=3.0996;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:17.21:0,17,128	0/0:7,0:7:18.03:0,18,214	0/0:14,0:7:15.04:0,15,178	0/0:16,0:9:19:0,19,224	0/0:5,0:5:2.05:0,2,40	0/0:15,0:15:45.15:0,45,581	0/0:10,0:10:27.04:0,27,330	0/0:28,0:28:82.10:0,82,913	0/0:9,0:9:27.09:0,27,348	1/1:1,11:12:15.75:385,16,0	0/1:1,10:11:3.78:184,0,4	0/0:6,0:6:8.61:0,9,65	0/0:6,0:7:11.83:0,12,128	0/0:8,0:8:14.83:0,15,156	1/1:0,11:11:15:158,15,0	0/0:11,0:11:30.08:0,30,370	0/0:15,0:14:11.58:0,12,244	0/1:3,10:13:6.74:335,0,7	0/0:16,0:15:45.14:0,45,567	0/0:16,0:16:35.68:0,36,349	0/0:14,0:14:31.90:0,32,375	0/0:2,0:2:6:0,6,62	0/0:8,0:8:17.63:0,18,170	0/0:4,0:4:5.81:0,6,52	0/1:0,10:10:3.27:117,0,3	1/1:7,13:19:41.48:568,41,0	0/0:10,0:10:30.10:0,30,385	0/0:19,0:19:57.06:0,57,668
chr10	42654001	.	TG	T	567.55	PASS	AB=0.976;AC=9;AF=0.161;AN=56;BaseQRankSum=5.230;DP=322;FS=13.021;HRun=1;HaplotypeScore=79.4073;InbreedingCoeff=0.5074;MQ=64.68;MQ0=6;MQRankSum=-4.063;QD=7.57;ReadPosRankSum=3.817;VQSLOD=-0.4898;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:9.56:0,10,84	0/0:7,0:7:19.74:0,20,224	0/0:14,0:7:20.90:0,21,245	0/0:17,0:10:19.04:0,19,243	0/0:5,0:5:8.06:0,8,97	0/0:15,0:15:45.15:0,45,709	0/0:9,0:9:27.05:0,27,384	0/0:28,0:28:67.49:0,67,813	0/0:9,0:9:27.09:0,27,402	1/1:12,0:12:12.33:196,12,0	0/1:9,0:9:11.26:45,0,11	0/0:6,0:6:9.03:0,9,116	0/0:7,0:7:12.04:0,12,173	0/0:8,0:8:15.05:0,15,209	1/1:11,0:11:12.90:57,13,0	0/0:11,0:11:27.96:0,28,362	0/0:15,0:14:18.92:0,19,270	0/1:12,1:13:18.79:148,0,19	0/0:16,0:15:44.69:0,45,533	0/0:15,0:15:30.87:0,31,312	0/0:12,0:12:30.34:0,30,364	0/0:2,0:2:6.02:0,6,84	0/0:7,0:7:18.06:0,18,239	0/0:4,0:4:6.02:0,6,77	0/1:10,0:10:15.64:24,0,16	1/1:17,3:19:9.92:248,10,0	0/0:10,0:10:30.09:0,30,406	0/0:19,0:19:56.70:0,57,702
chr10	42654004	.	G	GTA	1565.10	PASS	AB=1.000;AC=20;AF=0.357;AN=56;BaseQRankSum=5.131;DP=314;FS=16.802;HRun=0;HaplotypeScore=81.1770;InbreedingCoeff=0.5544;MQ=62.90;MQ0=6;MQRankSum=-5.324;QD=14.36;ReadPosRankSum=2.365;VQSLOD=2.1708;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:17.83:0,18,123	0/0:7,0:7:17.23:0,17,162	0/0:13,0:6:8.32:0,8,97	0/0:18,0:10:0.74:0,1,160	1/1:5,0:5:2.20:11,2,0	0/0:15,0:15:45.09:0,45,597	0/0:9,0:9:24.05:0,24,319	0/0:25,0:25:73.65:0,74,829	0/0:8,0:8:24.05:0,24,319	1/1:8,5:13:32.18:329,32,0	1/1:2,7:9:20.95:238,21,0	0/1:6,0:6:15.16:24,0,15	0/1:7,0:7:4.36:4,0,58	0/1:7,0:7:9.24:9,0,39	1/1:7,4:11:12.04:160,12,0	0/0:10,0:10:27.02:0,27,292	0/0:14,0:13:19.46:0,19,165	1/1:6,7:13:3.69:293,4,0	0/0:15,0:13:39.09:0,39,499	0/0:16,0:16:35.41:0,35,383	0/0:13,0:13:33.01:0,33,358	0/0:2,0:2:2.99:0,3,24	0/1:7,0:7:22.66:23,0,36	1/1:3,0:3:2.92:17,3,0	1/1:3,6:9:14.94:178,15,0	1/1:11,8:18:38.78:464,39,0	0/0:11,0:11:32.73:0,33,394	0/0:19,0:19:54.10:0,54,707
chr10	42655099	.	ATGTGTGTGTGTGTG	A	1913.68	PASS	AB=0.953;AC=10;AF=0.192;AN=52;BaseQRankSum=1.384;DP=636;FS=0.769;HRun=0;HaplotypeScore=238.8360;InbreedingCoeff=0.5645;MQ=50.15;MQ0=12;MQRankSum=-3.807;QD=14.72;ReadPosRankSum=-2.688;VQSLOD=2.2573;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:29:30.57:0,31,857	0/0:12,0:16:24.97:0,25,1054	./.	./.	0/0:16,0:15:6.02:0,6,356	0/0:21,0:22:42.13:0,42,2309	0/0:35,0:38:62.67:0,63,2522	0/0:41,0:38:45.11:0,45,1017	0/0:18,0:20:39.61:0,40,2081	0/1:26,3:28:99:1058,0,164	1/1:5,7:12:2.97:20,3,0	0/0:21,0:24:33.11:0,33,1685	0/0:25,0:25:30.08:0,30,1432	0/0:22,0:25:24.08:0,24,1223	1/1:12,15:27:6.02:82,6,0	0/0:17,0:17:14.51:0,15,539	0/0:15,0:20:32.77:0,33,1340	0/1:10,0:9:34.62:153,0,35	0/0:16,0:15:28.91:0,29,973	0/0:29,0:27:27.07:0,27,1003	0/0:30,0:28:9.03:0,9,416	0/0:32,0:33:63.22:0,63,3229	0/0:21,0:19:39.13:0,39,1991	0/0:24,0:23:38.96:0,39,1942	1/1:8,15:23:1.24:86,1,0	1/1:19,9:28:24.01:657,24,0	0/0:19,0:19:30.57:0,31,1053	0/0:5,0:10:15.01:0,15,495
chr10	42655256	.	A	ACATTAGAGGCA	1295.78	PASS	AB=0.750;AC=22;AF=0.917;AN=24;BaseQRankSum=-0.985;DP=27;FS=2.644;HRun=0;HaplotypeScore=31.1937;InbreedingCoeff=-0.2730;MQ=193.18;MQ0=0;MQRankSum=-1.121;QD=49.84;ReadPosRankSum=0.102;VQSLOD=3.0475;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/1:6,1:9:99:478,0,120	0/1:4,0:6:16.26:383,0,16	./.	./.	1/1:1,0:1:3.01:47,3,0	./.	1/1:1,0:1:3.01:71,3,0	1/1:1,0:1:3.01:52,3,0	./.	./.	1/1:1,0:1:3.01:69,3,0	1/1:1,0:1:3.01:72,3,0	1/1:2,0:2:5.98:46,6,0	1/1:1,0:1:2.99:24,3,0	./.	./.	1/1:1,0:1:2.99:23,3,0	./.	./.	./.	./.	1/1:1,0:1:3.01:69,3,0	./.	./.	1/1:1,0:1:3.01:46,3,0	./.
chr10	42655324	.	C	CG	5766.44	PASS	AB=0.964;AC=50;AF=0.893;AN=56;BaseQRankSum=-2.663;DP=363;FS=51.828;HRun=0;HaplotypeScore=100.3541;InbreedingCoeff=0.2841;MQ=71.49;MQ0=0;MQRankSum=-10.944;QD=16.20;ReadPosRankSum=6.535;VQSLOD=3.3818;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,25:26:72.24:1021,72,0	1/1:0,6:6:18.06:265,18,0	0/0:6,0:6:10.11:0,10,72	0/1:10,0:11:3.41:3,0,82	1/1:15,0:15:22.57:131,23,0	1/1:12,0:12:21.42:100,21,0	1/1:16,0:16:0.24:50,0,0	1/1:0,23:23:68.99:895,69,0	1/1:10,0:10:13.62:62,14,0	0/1:18,0:18:24.53:37,0,25	1/1:13,0:13:26.96:126,27,0	1/1:13,0:13:13.82:79,14,0	1/1:15,0:15:15.24:92,15,0	1/1:18,0:18:16.78:92,17,0	1/1:11,0:11:13.26:63,13,0	1/1:1,11:12:35.91:478,36,0	1/1:9,0:9:10.18:45,10,0	1/1:8,0:8:10.57:38,11,0	1/1:2,9:11:30.09:413,30,0	1/1:0,15:15:41.88:564,42,0	1/1:0,9:9:24.08:351,24,0	1/1:18,0:18:40.06:198,40,0	1/1:15,0:15:15.78:91,16,0	1/1:9,0:9:10.07:51,10,0	0/1:15,0:15:3.97:47,0,4	0/1:16,0:16:2.90:43,0,3	1/1:0,5:5:15.05:218,15,0	1/1:1,5:6:15.05:214,15,0
chr10	42656072	.	GACAACCA	G	18464.22	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=18.958;DP=642;FS=5.619;HRun=0;HaplotypeScore=175.4668;InbreedingCoeff=0.9727;MQ=88.12;MQ0=0;MQRankSum=-18.932;QD=64.79;ReadPosRankSum=0.073;VQSLOD=4.3466;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,21:25:45.15:1211,45,0	1/1:2,12:14:30.10:804,30,0	0/0:33,0:33:99:0,99,3416	0/0:22,0:22:66.23:0,66,2525	0/0:32,0:32:93.32:0,93,3806	0/0:19,0:19:57.20:0,57,2220	0/0:29,0:29:84.27:0,84,3324	1/1:3,21:24:63.18:1552,63,0	0/0:23,0:23:66.23:0,66,2589	1/1:1,22:23:66.20:1595,66,0	1/1:0,18:18:54.18:1331,54,0	0/0:29,0:29:84.29:0,84,3195	0/0:31,0:31:93.30:0,93,3698	0/0:23,0:23:66.23:0,66,2704	1/1:2,11:13:27.09:727,27,0	1/1:3,20:23:51.18:1373,51,0	0/0:27,0:27:78.27:0,78,3161	1/1:0,6:6:18.06:485,18,0	1/1:1,17:18:51.18:1339,51,0	1/1:1,32:33:90.31:2404,90,0	1/1:1,8:9:4.73:159,5,0	0/0:20,0:20:60.21:0,60,2142	0/0:32,0:32:93.32:0,93,3751	0/0:37,0:37:99:0,108,4204	1/1:0,22:22:63.22:1689,63,0	1/1:4,22:26:66.22:1697,66,0	1/1:1,26:27:69.24:1858,69,0	1/1:0,4:4:9.03:242,9,0
chr10	42657305	.	A	ATAT	6451.48	PASS	AC=16;AF=0.296;AN=54;BaseQRankSum=17.823;DP=739;FS=3.529;HRun=0;HaplotypeScore=157.7542;InbreedingCoeff=0.9986;MQ=88.34;MQ0=0;MQRankSum=-14.128;QD=33.96;ReadPosRankSum=-1.327;VQSLOD=4.8597;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,12:32:50.14:760,50,0	1/1:0,16:21:54.80:945,55,0	0/0:37,0:37:99:0,105,1942	0/0:33,0:33:90.25:0,90,1576	0/0:30,0:30:87.28:0,87,1582	0/0:20,0:20:57.16:0,57,993	0/0:31,0:31:93.32:0,93,1710	1/1:0,7:19:48.76:694,49,0	0/0:27,0:27:81.28:0,81,1504	0/0:32,0:32:96.33:0,96,1783	0/0:13,0:13:39.12:0,39,695	0/0:28,0:28:81.26:0,81,1472	0/0:36,0:36:99:0,108,2002	0/0:35,0:35:99:0,105,1927	0/0:37,0:37:99:0,111,2033	1/1:0,19:34:81.03:1383,81,0	0/0:25,0:25:75.26:0,75,1398	0/0:23,0:23:69.20:0,69,1222	1/1:2,5:15:34.25:477,34,0	1/1:0,20:28:53.14:1101,53,0	1/1:1,5:19:18.02:320,18,0	0/0:35,0:35:99:0,105,1950	0/0:22,0:22:63.22:0,63,1156	0/0:23,0:23:66.23:0,66,1230	0/0:20,0:20:60.21:0,60,1114	0/0:41,0:41:99:0,123,2266	1/1:0,11:21:53.35:770,53,0	./.
chr10	42657306	.	G	GGAGGA	9924.81	PASS	AB=0.741;AC=13;AF=0.232;AN=56;BaseQRankSum=14.806;DP=785;FS=2.015;HRun=0;HaplotypeScore=202.3283;InbreedingCoeff=0.4537;MQ=85.12;MQ0=0;MQRankSum=-17.067;QD=42.05;ReadPosRankSum=0.583;VQSLOD=5.0088;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:31,12:42:11.52:1460,0,12	1/1:8,15:24:13.79:1469,14,0	0/0:36,0:36:99:0,102,1947	0/0:32,0:32:90.27:0,90,1738	0/0:30,0:30:84.29:0,84,1799	0/0:20,0:20:51.17:0,51,1041	0/0:31,0:31:81.26:0,81,1698	0/1:22,7:29:20.43:1372,0,20	0/0:27,0:27:78.25:0,78,1636	0/0:33,0:33:96.32:0,96,1992	0/0:13,0:13:39.13:0,39,823	0/0:29,0:29:75.24:0,75,1570	0/0:37,0:37:99:0,102,2193	0/0:34,0:34:99:0,102,2195	0/0:37,0:37:99:0,105,2197	0/1:20,19:39:37.19:1673,0,37	0/0:25,0:25:75.23:0,75,1585	0/0:21,0:21:63.22:0,63,1350	0/1:11,5:16:42.45:562,0,42	1/1:15,20:35:44.98:1713,45,0	1/1:17,5:22:6.46:458,6,0	0/0:37,0:37:99:0,102,2154	0/0:23,0:23:57.20:0,57,1237	0/0:23,0:23:69.21:0,69,1418	0/0:20,0:20:54.19:0,54,1173	0/0:41,0:41:99:0,120,2510	0/1:14,11:26:46.74:1056,0,47	1/1:2,0:2:6.02:163,6,0
chr10	42657695	.	C	CATTT	1045.20	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-3.792;DP=777;FS=0.000;HRun=0;HaplotypeScore=124.1347;InbreedingCoeff=0.9991;MQ=93.69;MQ0=0;MQRankSum=-1.379;QD=52.26;ReadPosRankSum=0.470;VQSLOD=4.7066;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:61,0:61:99:0,169,3042	0/0:13,0:13:39.11:0,39,668	0/0:37,0:37:95.81:0,96,1685	0/0:33,0:33:80.38:0,80,1360	1/1:2,18:20:48.08:1140,48,0	0/0:27,0:27:66.23:0,66,1199	0/0:25,0:25:63.20:0,63,1113	0/0:37,0:37:93.32:0,93,1683	0/0:27,0:27:78.25:0,78,1381	0/0:28,0:28:78.26:0,78,1388	0/0:18,0:18:39.10:0,39,649	0/0:32,0:32:90.29:0,90,1595	0/0:28,0:28:84.29:0,84,1519	0/0:35,0:35:99:0,102,1855	0/0:27,0:27:69.22:0,69,1218	0/0:27,0:27:72.23:0,72,1274	0/0:30,0:30:81.28:0,81,1469	0/0:14,0:13:42.14:0,42,746	0/0:33,0:33:84.27:0,84,1450	0/0:14,0:14:33.11:0,33,598	0/0:50,0:50:99:0,148,2668	0/0:17,0:17:45.15:0,45,818	0/0:24,0:24:69.24:0,69,1237	0/0:32,0:32:90.29:0,90,1602	0/0:28,0:28:81.28:0,81,1467	0/0:29,0:29:81.28:0,81,1473	0/0:21,0:21:57.20:0,57,1037	0/0:10,0:10:30.10:0,30,544
chr10	42657872	.	CACACACACAA	C	2683.17	PASS	AB=1.000;AC=31;AF=0.554;AN=56;BaseQRankSum=5.822;DP=749;FS=60.285;HRun=0;HaplotypeScore=215.5447;InbreedingCoeff=0.8119;MQ=65.69;MQ0=16;MQRankSum=-2.398;QD=7.56;ReadPosRankSum=1.077;VQSLOD=0.6548;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:45,0:44:11.99:205,12,0	0/1:3,0:3:8.96:9,0,54	0/0:54,0:29:25.22:0,25,241	0/0:61,0:36:37:0,37,318	1/1:20,0:20:11.61:223,12,0	0/0:23,0:23:60.16:0,60,2001	0/0:26,0:26:66.62:0,67,1643	1/1:30,0:26:26.33:190,26,0	0/0:32,0:32:61.09:0,61,1437	1/1:22,0:22:37.14:330,37,0	1/1:14,0:14:2.97:20,3,0	0/0:26,0:26:51.59:0,52,1439	0/0:26,0:26:57.77:0,58,1747	0/0:25,0:25:51.10:0,51,1482	1/1:27,0:26:11.82:198,12,0	1/1:8,13:21:12.04:367,12,0	0/0:34,0:32:64:0,64,2061	1/1:9,0:9:16.77:141,17,0	1/1:19,0:19:18.71:163,19,0	1/1:21,1:22:12.04:229,12,0	1/1:35,0:35:34.01:366,34,0	0/0:27,0:27:38.86:0,39,1121	0/0:20,0:20:48.10:0,48,1252	0/0:40,0:39:87.16:0,87,2664	1/1:31,0:31:2.05:23,2,0	1/1:24,0:22:29.73:250,30,0	1/1:19,1:19:2.74:91,3,0	1/1:5,8:13:3.01:92,3,0
chr10	42657874	.	CACACACAAACACACACAA	C	2382.31	PASS	AB=0.763;AC=12;AF=0.214;AN=56;BaseQRankSum=5.048;DP=747;FS=10.750;HRun=0;HaplotypeScore=302.9048;InbreedingCoeff=0.6681;MQ=65.43;MQ0=18;MQRankSum=-0.157;QD=13.54;ReadPosRankSum=-0.839;VQSLOD=0.8739;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:45,0:44:57.93:58,0,139	0/0:3,0:3:9.03:0,9,294	0/0:54,0:29:46.43:0,46,672	0/0:60,0:35:31.23:0,31,753	0/0:22,0:22:13.16:0,13,553	0/0:24,0:24:69.22:0,69,3816	0/0:26,0:26:74.25:0,74,3166	0/0:28,0:24:33.26:0,33,382	0/0:32,0:32:72.37:0,72,2964	1/1:3,21:23:56.48:821,56,0	1/1:0,16:16:3.01:102,3,0	0/0:24,0:24:57.64:0,58,2766	0/0:26,0:26:54.84:0,55,3295	0/0:24,0:24:57.18:0,57,2759	1/1:3,25:27:11.80:524,12,0	0/0:19,0:19:18.97:0,19,280	0/0:35,0:33:93.27:0,93,4323	1/1:8,1:9:20.99:343,21,0	0/0:20,0:19:39.46:0,39,713	0/0:22,0:22:9.02:0,9,344	0/0:37,0:37:66.53:0,67,1250	0/0:26,0:26:0.72:0,1,2364	0/0:20,0:20:48.16:0,48,2412	0/0:41,0:40:93.22:0,93,5137	0/1:3,28:31:8.75:99,0,9	1/1:12,11:21:40.53:606,41,0	0/0:18,0:17:15.16:0,15,121	0/0:10,0:10:6:0,6,61
chr10	42657882	.	AACACACACAAAC	A	2077.04	PASS	AB=1.000;AC=25;AF=0.446;AN=56;BaseQRankSum=5.968;DP=720;FS=46.551;HRun=0;HaplotypeScore=230.5084;InbreedingCoeff=0.5258;MQ=62.71;MQ0=21;MQRankSum=-2.177;QD=6.15;ReadPosRankSum=0.376;VQSLOD=1.3168;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,31:41:12.04:280,12,0	0/0:4,0:4:2.83:0,3,81	0/0:43,0:19:25.22:0,25,241	0/0:55,0:31:36.99:0,37,318	0/1:24,0:24:99:151,0,112	0/0:25,0:25:65.92:0,66,2543	0/0:27,0:27:70.10:0,70,1979	1/1:20,0:15:17.67:171,18,0	0/0:29,0:29:62.10:0,62,1727	1/1:23,0:22:13.84:316,14,0	1/1:16,0:16:3.01:33,3,0	0/0:23,0:23:54.60:0,55,1791	0/0:24,0:24:57.09:0,57,2119	0/0:22,0:21:45.25:0,45,1732	1/1:26,0:25:11.95:249,12,0	1/1:18,0:18:15.02:207,15,0	0/0:37,0:35:71.85:0,72,2699	1/1:9,0:9:17.65:156,18,0	0/1:18,0:17:95.40:101,0,95	0/1:18,0:19:11.37:72,0,11	0/1:41,0:40:99:173,0,188	0/0:25,0:25:27.64:0,28,1530	0/0:23,0:23:62.28:0,62,1773	0/0:45,0:44:89.36:0,89,3495	1/1:30,0:30:2.58:36,3,0	1/1:23,0:21:26.25:244,26,0	0/1:19,0:18:19.18:41,0,19	1/1:10,0:10:3.01:47,3,0
chr10	42657884	.	CACACACAA	C	3130.84	PASS	AB=0.781;AC=30;AF=0.536;AN=56;BaseQRankSum=5.431;DP=719;FS=36.359;HRun=0;HaplotypeScore=186.4841;InbreedingCoeff=0.7625;MQ=61.80;MQ0=22;MQRankSum=-1.682;QD=9.15;ReadPosRankSum=-0.618;VQSLOD=1.2609;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:43,0:41:11.04:150,11,0	0/1:4,0:4:15.36:34,0,15	0/0:42,0:18:25.22:0,25,240	0/0:54,0:30:36.59:0,37,316	1/1:24,0:24:6.22:355,6,0	0/0:25,0:25:65.99:0,66,1845	0/0:26,0:26:70.02:0,70,1411	1/1:18,0:13:26.57:192,27,0	0/0:30,0:30:59.47:0,59,1303	1/1:23,0:22:36.73:317,37,0	1/1:16,0:16:2.37:8,2,0	0/0:23,0:23:57.61:0,58,1332	0/0:23,0:23:58.13:0,58,1541	0/0:22,0:21:48.87:0,49,1310	1/1:26,0:25:11.93:146,12,0	1/1:18,0:18:11.76:234,12,0	0/0:37,0:35:28.16:0,28,1563	1/1:9,0:9:17.65:130,18,0	1/1:7,11:17:28.92:368,29,0	1/1:5,14:19:11.49:314,11,0	1/1:42,0:41:50.21:724,50,0	0/0:25,0:25:48:0,48,1152	0/0:23,0:23:21.04:0,21,1281	0/0:47,0:46:99:0,106,2543	1/1:31,0:31:2.04:10,2,0	1/1:23,0:21:29.09:250,29,0	0/1:4,14:18:7.03:53,0,7	1/1:10,0:10:3.01:59,3,0
chr10	42657886	.	CACACAA	C	2717.10	PASS	AB=0.980;AC=25;AF=0.446;AN=56;BaseQRankSum=6.552;DP=717;FS=29.267;HRun=0;HaplotypeScore=167.8914;InbreedingCoeff=0.5787;MQ=60.95;MQ0=22;MQRankSum=-2.049;QD=7.94;ReadPosRankSum=-1.176;VQSLOD=0.9266;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:41,0:39:10.64:113,11,0	1/1:4,0:4:8.43:103,8,0	0/0:41,0:17:25.06:0,25,235	0/0:53,0:29:37:0,37,318	0/1:20,4:24:6.41:407,0,6	0/0:25,0:25:65.39:0,65,1490	0/0:26,0:26:72.62:0,73,1231	1/1:19,0:14:22.26:197,22,0	0/0:29,0:29:57.49:0,57,1059	1/1:23,0:22:43.52:356,44,0	0/1:16,0:16:0:0,0,0	0/0:24,0:24:57.01:0,57,1061	0/0:23,0:23:58.52:0,59,1230	0/0:21,0:20:48.18:0,48,1088	1/1:26,0:25:11.55:93,12,0	0/1:18,0:18:17.33:164,0,17	0/0:37,0:35:31.83:0,32,1377	1/1:13,0:13:19.68:136,20,0	1/1:16,0:15:10.13:247,10,0	1/1:18,0:18:5.07:174,5,0	0/1:42,0:41:4.78:457,0,5	0/0:26,0:26:51:0,51,1002	0/0:23,0:23:52.38:0,52,1103	0/0:47,0:46:99:0,106,2106	0/1:31,0:31:0.26:1,0,0	1/1:22,0:20:41.69:344,42,0	0/1:18,0:17:14.94:39,0,15	0/1:11,0:11:31.57:83,0,32
chr10	42657892	.	AAC	A	377.79	PASS	AB=0.965;AC=18;AF=0.333;AN=54;BaseQRankSum=6.387;DP=723;FS=0.618;HRun=0;HaplotypeScore=137.3267;InbreedingCoeff=-0.2511;MQ=56.67;MQ0=23;MQRankSum=-2.239;QD=1.01;ReadPosRankSum=0.907;VQSLOD=2.5641;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:39,0:37:8.62:60,9,0	1/1:4,0:4:2.37:8,2,0	./.	0/0:45,0:24:2.98:0,3,21	0/1:25,0:25:37.30:37,0,52	0/1:23,2:26:28.95:29,0,579	0/0:25,0:26:18.96:0,19,394	0/0:22,0:17:7.57:0,8,40	0/1:26,1:27:26.93:27,0,277	0/1:23,0:22:7.24:7,0,19	0/0:16,0:16:2.68:0,3,11	0/1:23,2:25:31.75:32,0,356	0/1:23,1:24:63.13:63,0,312	0/1:21,0:20:6.08:6,0,311	0/0:27,0:26:6.15:0,6,40	0/1:17,1:18:27.65:46,0,28	0/0:26,0:36:39.33:0,39,512	0/0:14,0:14:3.11:0,3,11	0/1:17,0:15:33.12:46,0,33	0/1:21,0:21:11.39:11,0,98	0/0:48,0:47:28.26:0,28,227	0/1:22,4:26:30.43:30,0,326	0/0:22,0:23:36.11:0,36,508	0/1:46,3:49:99:113,0,729	0/0:32,0:32:2.50:0,2,9	0/0:22,0:20:9.70:0,10,55	0/1:16,0:15:4.54:5,0,31	0/1:11,0:11:4.13:4,0,35
chr10	42658811	.	CTGTGTGTGTGTG	C	586.50	PASS	AB=0.731;AC=15;AF=0.313;AN=48;BaseQRankSum=3.681;DP=449;FS=10.121;HRun=0;HaplotypeScore=146.7620;InbreedingCoeff=0.4379;MQ=41.04;MQ0=32;MQRankSum=-4.257;QD=4.34;ReadPosRankSum=0.262;VQSLOD=1.8307;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:20:21.07:0,21,1003	0/0:7,0:6:0:0,0,0	./.	./.	0/0:16,0:16:3.01:0,3,140	0/0:16,0:16:9.50:0,10,343	0/0:22,0:19:10.86:0,11,390	0/0:17,0:16:0:0,0,0	0/0:22,0:21:27.16:0,27,1027	1/1:12,0:14:3.01:84,3,0	./.	0/0:18,0:16:8.85:0,9,449	0/0:17,0:17:21.07:0,21,850	0/0:18,0:18:12.04:0,12,550	0/1:10,0:19:0:0,0,0	0/1:18,7:23:12.26:87,0,12	0/0:28,0:25:30.10:0,30,1182	1/1:11,0:10:3.01:84,3,0	0/0:12,0:12:1.25:0,1,3	1/1:6,6:11:3.01:99,3,0	1/1:15,0:12:0.47:1,0,0	0/0:11,0:11:0.47:0,0,1	0/0:15,0:13:9.03:0,9,420	0/0:38,0:33:36.59:0,37,1593	./.	1/1:11,0:12:3.01:87,3,0	0/1:12,6:17:5.13:169,0,5	1/1:4,1:4:3.01:102,3,0
chr10	42659158	.	A	ATGTACCTTAAC	35553.73	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=-3.405;DP=588;FS=4.977;HRun=0;HaplotypeScore=164.4476;InbreedingCoeff=0.9668;MQ=75.96;MQ0=0;MQRankSum=-16.898;QD=111.45;ReadPosRankSum=-1.750;VQSLOD=4.7505;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,13:28:63.22:3366,63,0	1/1:3,4:9:12.04:682,12,0	0/0:23,0:23:51.17:0,51,1574	0/0:10,0:11:30.10:0,30,877	1/1:10,13:28:63.21:2481,63,0	0/0:22,0:22:66.23:0,66,2187	0/0:17,0:17:42.14:0,42,1251	1/1:27,4:35:96.31:3893,96,0	0/0:31,0:31:90.31:0,90,3051	1/1:8,21:32:87.77:4374,88,0	1/1:5,5:15:24.08:1128,24,0	0/0:20,0:20:60.21:0,60,1844	0/0:18,0:18:48.13:0,48,1433	0/0:23,0:23:66.23:0,66,2105	1/1:3,17:22:60.20:3140,60,0	1/1:5,15:21:54.19:2836,54,0	0/0:32,0:32:93.30:0,93,3054	1/1:3,4:10:12.04:582,12,0	1/1:5,7:17:48.16:1891,48,0	1/1:2,5:10:30.05:1134,30,0	1/1:9,7:19:39.13:1666,39,0	0/0:18,0:18:48.16:0,48,1556	0/0:22,0:22:48.16:0,48,1509	0/0:32,0:32:81.28:0,81,2690	1/1:12,5:19:39.13:1755,39,0	1/1:8,11:22:57.19:2808,57,0	1/1:12,15:30:75.26:3648,75,0	1/1:0,1:1:3.01:170,3,0
chr10	42659524	.	C	CTA	432.28	PASS	AB=0.961;AC=6;AF=0.107;AN=56;BaseQRankSum=7.768;DP=513;FS=4.059;HRun=0;HaplotypeScore=98.8517;InbreedingCoeff=-0.0471;MQ=45.38;MQ0=33;MQRankSum=0.022;QD=3.35;ReadPosRankSum=2.286;VQSLOD=1.7677;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:19:21.71:0,22,173	0/0:8,0:8:14.13:0,14,85	0/0:15,0:2:2.90:0,3,16	0/0:41,0:9:11.63:0,12,101	0/0:15,0:14:17.63:0,18,136	0/0:17,0:16:32.90:0,33,265	0/0:23,0:22:45.82:0,46,372	0/0:26,0:24:56.22:0,56,432	0/0:12,0:12:17.88:0,18,172	0/1:18,8:25:99:108,0,232	0/1:11,0:11:3.74:52,0,4	0/0:14,0:13:29.94:0,30,263	0/0:13,0:12:29.90:0,30,254	0/0:11,0:11:26.94:0,27,219	0/1:28,0:28:38.02:38,0,177	0/0:9,0:9:3.29:0,3,90	0/0:19,0:18:12.75:0,13,247	0/1:22,0:22:99:116,0,175	0/0:12,0:11:30.39:0,30,256	0/0:12,0:11:29.89:0,30,240	0/0:23,0:23:36.42:0,36,298	0/0:15,0:14:26.79:0,27,216	0/0:15,0:15:23.83:0,24,194	0/0:31,0:30:73.85:0,74,620	0/1:21,0:21:39.61:90,0,40	0/1:21,0:21:66.58:152,0,67	0/0:15,0:15:41.80:0,42,322	0/0:17,0:10:26.74:0,27,192
chr10	42661012	.	CAG	C	5408.64	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=13.993;DP=742;FS=2.063;HRun=0;HaplotypeScore=90.8455;InbreedingCoeff=0.9983;MQ=71.87;MQ0=0;MQRankSum=-0.468;QD=37.82;ReadPosRankSum=2.978;VQSLOD=6.8882;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,138,2469	0/0:12,0:12:30.10:0,30,550	0/0:25,0:24:66.21:0,66,1162	0/0:19,0:19:45.05:0,45,670	0/0:31,0:31:90.29:0,90,1608	0/0:17,0:16:48.16:0,48,878	0/0:29,0:29:78.25:0,78,1390	0/0:45,0:45:99:0,120,2129	0/0:37,0:37:99:0,105,1860	1/1:2,22:25:66.19:924,66,0	1/1:0,19:19:48.16:687,48,0	0/0:23,0:23:63.20:0,63,1124	0/0:17,0:17:48.16:0,48,873	0/0:27,0:27:78.25:0,78,1399	1/1:0,31:31:90.30:1289,90,0	0/0:32,0:32:93.31:0,93,1674	0/0:29,0:28:84.29:0,84,1532	1/1:2,19:21:51.17:731,51,0	0/0:21,0:21:54.66:0,55,965	0/0:29,0:29:75.26:0,75,1365	0/0:43,0:43:99:0,123,2228	0/0:19,0:19:51.17:0,51,935	0/0:16,0:16:48.14:0,48,805	0/0:41,0:41:99:0,123,2235	1/1:1,20:21:48.16:688,48,0	1/1:0,26:26:78.23:1090,78,0	0/0:30,0:30:84.29:0,84,1530	0/0:7,0:7:18.06:0,18,330
chr10	42661186	.	AACACACACACAC	A	4287.04	PASS	AB=0.668;AC=14;AF=0.269;AN=52;BaseQRankSum=8.822;DP=711;FS=0.000;HRun=0;HaplotypeScore=229.4015;InbreedingCoeff=0.7727;MQ=63.86;MQ0=16;MQRankSum=-9.538;QD=18.48;ReadPosRankSum=2.359;VQSLOD=3.6683;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:44:46.36:0,46,843	0/0:7,0:17:30.10:0,30,1398	./.	./.	0/1:12,0:29:39.83:40,0,89	0/0:14,0:14:21.07:0,21,982	0/0:27,0:29:48.61:0,49,1870	0/0:21,0:19:12.04:0,12,398	0/0:22,0:24:37.01:0,37,1896	0/0:22,0:23:54.07:0,54,1783	0/0:22,0:22:28.34:0,28,1195	1/1:9,17:26:38.29:1211,38,0	1/1:10,12:23:14.73:488,15,0	1/1:11,18:31:24.08:718,24,0	0/0:17,0:31:12.04:0,12,367	0/0:14,0:27:24.97:0,25,313	1/1:13,13:26:7.84:152,8,0	0/0:29,0:31:60.40:0,60,2248	0/0:18,0:16:15.03:0,15,529	0/0:13,0:13:24.07:0,24,919	0/0:22,0:27:30.10:0,30,1245	1/1:7,18:29:24.08:690,24,0	1/1:14,13:29:24.53:612,25,0	0/1:21,14:36:6.33:376,0,6	0/0:19,0:22:39.13:0,39,1739	0/0:24,0:24:36.49:0,36,1178	0/0:16,0:17:30.10:0,30,1319	0/0:5,0:5:6.02:0,6,308
chr10	42661951	.	TTGTG	T	4337.89	PASS	AB=0.861;AC=18;AF=0.321;AN=56;BaseQRankSum=-4.516;DP=840;FS=2.326;HRun=0;HaplotypeScore=263.1076;InbreedingCoeff=0.4991;MQ=59.39;MQ0=4;MQRankSum=5.631;QD=13.19;ReadPosRankSum=5.438;VQSLOD=4.2904;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:38:23.97:0,24,234	0/0:17,0:22:37.64:0,38,521	0/0:33,0:21:3.01:0,3,33	0/0:24,0:18:6.02:0,6,144	0/0:21,0:25:26.29:0,26,281	0/0:38,0:40:98.26:0,98,2015	0/0:22,0:22:45.13:0,45,1020	0/0:44,0:44:60.44:0,60,712	0/0:23,0:25:43.51:0,44,1109	0/0:33,0:42:44.26:0,44,411	0/0:15,0:32:55.46:0,55,278	1/1:10,21:33:63.20:962,63,0	1/1:9,15:24:50.84:785,51,0	1/1:11,12:22:39.16:561,39,0	0/1:21,1:34:28.06:28,0,369	0/0:36,0:38:49.49:0,49,568	0/1:14,1:24:3.57:4,0,164	0/0:14,0:24:34.42:0,34,235	0/0:33,0:31:41.86:0,42,485	0/1:25,0:25:10.06:10,0,224	0/0:37,0:37:5.77:0,6,83	1/1:14,14:29:39.13:609,39,0	1/1:8,10:19:15.05:242,15,0	1/1:14,25:40:63.20:998,63,0	0/1:18,2:28:76.99:77,0,159	0/0:22,0:31:48.84:0,49,403	0/1:27,0:29:4.69:5,0,297	0/1:19,0:18:57.24:57,0,94
chr10	42662041	.	AGT	A	6651.24	PASS	AB=0.769;AC=15;AF=0.268;AN=56;BaseQRankSum=21.192;DP=1157;FS=61.554;HRun=0;HaplotypeScore=447.2083;InbreedingCoeff=-0.3512;MQ=52.32;MQ0=1;MQRankSum=-18.455;QD=9.09;ReadPosRankSum=-3.726;VQSLOD=2.5867;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:22,5:27:61.01:61,0,906	0/1:9,11:20:99:385,0,209	0/0:45,0:39:92.77:0,93,1439	0/0:37,1:35:75.25:0,75,1207	0/1:19,25:44:99:763,0,515	0/0:38,0:38:96.33:0,96,1638	0/0:25,0:25:65.88:0,66,1131	0/1:48,13:60:99:404,0,1580	0/0:37,0:37:81.83:0,82,1698	0/1:62,31:93:99:993,0,2073	0/1:39,15:54:99:383,0,1406	0/0:37,0:37:99:0,105,1790	0/0:34,0:34:93.32:0,93,1594	0/0:37,0:36:90.31:0,90,1543	0/1:37,18:55:99:567,0,1342	0/1:52,11:63:99:289,0,1756	0/0:18,0:18:48.16:0,48,823	0/0:25,1:26:24.29:0,24,989	0/1:21,6:27:94.50:95,0,755	0/1:32,26:58:99:905,0,838	0/1:43,3:46:0.91:1,0,1733	0/0:29,0:29:75.26:0,75,1285	0/0:28,0:28:78.27:0,78,1338	0/0:32,0:32:81.28:0,81,1388	0/1:29,15:44:99:440,0,1071	0/1:56,17:73:99:486,0,2046	0/1:26,19:45:99:625,0,1005	0/1:14,8:22:99:254,0,516
chr10	42662058	.	TTG	T	6916.55	PASS	AB=0.658;AC=11;AF=0.196;AN=56;BaseQRankSum=-2.182;DP=1178;FS=15.971;HRun=0;HaplotypeScore=407.9185;InbreedingCoeff=0.0468;MQ=52.36;MQ0=1;MQRankSum=-0.973;QD=17.16;ReadPosRankSum=-1.770;VQSLOD=3.8909;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:9,21:30:2.40:494,0,2	0/1:11,7:18:99:230,0,316	0/0:54,0:48:98.46:0,98,1413	0/0:36,0:30:57.27:0,57,986	0/1:25,20:45:99:472,0,447	0/0:42,0:42:93.30:0,93,1543	0/0:29,0:29:72.25:0,72,1215	0/1:23,40:63:99:1319,0,317	0/0:38,0:38:81.83:0,82,1698	0/0:37,0:89:99:0,215,2450	0/0:18,0:50:99:0,111,1152	0/0:45,0:45:99:0,135,2258	0/0:39,0:39:99:0,108,1838	0/0:46,0:46:99:0,126,2004	0/0:23,0:55:99:0,111,1172	0/1:14,42:56:99:1111,0,148	0/0:6,0:20:46.40:0,46,416	0/0:2,0:36:69.04:0,69,615	0/1:15,15:29:99:479,0,430	0/1:27,20:47:99:615,0,568	1/1:10,38:48:95.28:1247,95,0	0/0:28,0:28:69.24:0,69,1180	0/0:30,0:30:78.25:0,78,1304	0/0:28,0:28:69.24:0,69,1175	0/0:17,0:41:90.12:0,90,1022	0/0:23,0:69:99:0,171,1860	0/1:28,13:41:99:464,0,650	0/1:9,16:25:99:486,0,295
chr10	42662084	.	GTA	G	3123.30	PASS	AB=0.821;AC=13;AF=0.232;AN=56;BaseQRankSum=16.827;DP=1128;FS=40.010;HRun=0;HaplotypeScore=323.8033;InbreedingCoeff=-0.2883;MQ=51.58;MQ0=1;MQRankSum=-14.887;QD=5.54;ReadPosRankSum=0.779;VQSLOD=1.5016;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:31,1:32:0.58:1,0,1035	0/1:12,7:19:99:214,0,452	0/0:57,0:45:99:0,129,1978	0/0:39,0:26:64.83:0,65,1082	0/1:28,15:43:99:388,0,1152	0/0:40,0:40:96.33:0,96,1848	0/0:33,0:33:90.25:0,90,1544	0/0:47,2:49:52.32:0,52,2107	0/0:41,0:41:99:0,104,1867	0/1:72,16:88:99:438,0,3290	0/1:39,10:49:99:178,0,1816	0/0:47,0:47:99:0,138,2573	0/0:44,0:44:99:0,120,2152	0/0:42,0:42:99:0,123,2240	0/1:44,9:53:99:289,0,1389	0/1:45,5:50:99:109,0,1708	0/0:16,0:16:45.58:0,46,757	0/0:37,0:37:73.74:0,74,1386	0/1:23,8:29:99:165,0,718	0/1:28,13:41:99:431,0,1143	0/0:44,1:45:91.53:0,92,1984	0/0:27,0:27:72.18:0,72,1252	0/0:22,0:22:66.23:0,66,1256	0/0:25,0:25:63.20:0,63,1161	0/1:27,11:38:99:302,0,1157	0/1:47,6:53:99:146,0,2162	0/1:23,12:35:99:419,0,791	0/1:25,7:32:99:194,0,1070
chr10	42662224	.	AATGTATGT	A	6233.60	PASS	AB=0.717;AC=10;AF=0.179;AN=56;BaseQRankSum=8.591;DP=834;FS=25.798;HRun=0;HaplotypeScore=239.8113;InbreedingCoeff=0.7555;MQ=55.38;MQ0=4;MQRankSum=-12.488;QD=40.74;ReadPosRankSum=1.545;VQSLOD=3.2037;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:41:63.22:0,63,2199	0/0:14,0:14:36.12:0,36,1476	0/0:27,0:22:21.07:0,21,779	0/0:32,0:30:32.60:0,33,936	0/0:26,0:26:51.18:0,51,2050	0/0:30,0:30:63.19:0,63,2396	0/0:26,0:26:60.21:0,60,2341	0/0:47,0:47:84.25:0,84,2816	0/0:23,0:24:57.18:0,57,2193	1/1:15,13:28:48.16:1202,48,0	1/1:7,16:23:36.12:886,36,0	0/0:38,0:38:84.27:0,84,3280	0/0:27,0:28:72.23:0,72,2877	0/0:40,0:40:87.30:0,87,3588	1/1:12,21:33:63.22:1618,63,0	0/0:37,0:38:90.28:0,90,3451	0/0:16,0:39:60.21:0,60,2126	0/1:13,3:16:91.89:219,0,92	0/0:23,0:19:30.10:0,30,1243	0/0:29,0:30:54.17:0,54,2045	0/0:35,0:37:59.37:0,59,1970	0/0:36,0:37:84.27:0,84,3218	0/0:31,0:31:60.21:0,60,2329	0/0:25,0:26:48.15:0,48,1821	1/1:10,14:24:39.13:1002,39,0	0/1:8,20:29:41.72:1307,0,42	0/0:33,0:33:87.30:0,87,3490	0/0:14,0:14:36.12:0,36,1499
chr10	42662302	.	CTT	C	1558.08	PASS	AB=0.791;AC=20;AF=0.417;AN=48;BaseQRankSum=5.554;DP=541;FS=3.614;HRun=19;HaplotypeScore=104.5719;InbreedingCoeff=0.5442;MQ=54.33;MQ0=18;MQRankSum=3.708;QD=5.88;ReadPosRankSum=6.545;VQSLOD=-0.5719;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:20,0:42:36.61:37,0,79	1/1:3,4:7:12.10:85,12,0	0/0:17,0:8:1.21:0,1,12	0/1:12,0:9:1.42:1,0,21	0/1:7,2:23:15.60:16,0,33	0/0:21,1:22:9.37:0,9,279	0/0:19,0:21:3.69:0,4,178	1/1:18,13:32:47.11:326,47,0	0/0:21,0:20:42.67:0,43,385	0/0:18,0:18:0:0,0,0	./.	0/0:22,0:22:26.09:0,26,250	0/0:16,0:16:19.83:0,20,242	0/0:23,0:21:25.77:0,26,196	./.	1/1:16,14:30:49.69:345,50,0	0/0:25,0:26:47.18:0,47,324	./.	1/1:8,10:18:27.19:205,27,0	1/1:5,15:23:38.26:256,38,0	1/1:4,9:13:23.04:167,23,0	0/0:19,0:21:33.92:0,34,237	0/0:13,0:12:2.39:0,2,99	0/1:22,0:23:0.83:1,0,223	./.	0/0:20,0:20:0:0,0,0	1/1:15,10:26:32.17:230,32,0	1/1:7,3:9:1.90:56,2,0
chr10	42663160	.	GCATT	G	12693.99	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-2.278;DP=754;FS=1.388;HRun=0;HaplotypeScore=155.3270;InbreedingCoeff=0.9996;MQ=71.49;MQ0=0;MQRankSum=-2.056;QD=34.03;ReadPosRankSum=2.762;VQSLOD=5.0433;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,11:19:36.10:570,36,0	1/1:4,10:14:30.10:497,30,0	0/0:22,0:22:30.09:0,30,581	0/0:21,0:20:30.10:0,30,687	0/0:11,0:39:92.44:0,92,1481	0/0:28,0:28:54.18:0,54,1328	0/0:28,0:28:72.23:0,72,1678	1/1:16,12:27:36.11:567,36,0	0/0:33,0:33:75.26:0,75,1844	0/0:14,0:39:86.40:0,86,1529	0/0:9,0:28:68.25:0,68,1098	1/1:7,19:26:54.18:896,54,0	1/1:10,22:33:63.22:1043,63,0	1/1:5,23:28:57.19:943,57,0	0/0:7,0:34:72.20:0,72,1219	1/1:10,21:31:72.22:1123,72,0	0/0:21,0:21:45.15:0,45,1102	0/0:5,0:17:27.09:0,27,475	1/1:3,12:15:33.11:539,33,0	1/1:4,27:31:81.20:1284,81,0	1/1:3,19:22:48.16:796,48,0	1/1:9,22:31:54.14:865,54,0	1/1:2,28:30:78.27:1282,78,0	1/1:7,21:28:54.18:896,54,0	0/0:8,0:24:45.14:0,45,749	0/0:15,0:46:99:0,105,1851	1/1:5,15:20:45.15:746,45,0	1/1:3,13:17:39.13:647,39,0
chr10	42663236	.	AAG	A	1297.29	PASS	AB=0.545;AC=3;AF=0.054;AN=56;BaseQRankSum=5.619;DP=768;FS=0.000;HRun=0;HaplotypeScore=108.4303;InbreedingCoeff=0.8066;MQ=85.50;MQ0=0;MQRankSum=-3.625;QD=30.89;ReadPosRankSum=2.560;VQSLOD=5.3182;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,18:18:48.16:707,48,0	0/0:11,0:11:33.11:0,33,618	0/0:23,0:23:66.20:0,66,1179	0/0:27,0:27:69.22:0,69,1183	0/0:32,0:32:84.29:0,84,1548	0/0:27,0:27:81.26:0,81,1468	0/0:32,0:32:90.31:0,90,1675	0/0:34,0:34:99:0,99,1842	0/0:31,0:31:90.29:0,90,1645	0/0:28,0:28:84.29:0,84,1573	0/0:26,0:26:72.23:0,72,1309	0/0:32,0:32:96.33:0,96,1777	0/0:29,0:29:78.27:0,78,1458	0/0:26,0:26:66.23:0,66,1220	0/0:38,0:38:99:0,108,1959	0/1:4,20:24:2.02:697,0,2	0/0:24,0:24:69.24:0,69,1270	0/0:19,0:19:51.17:0,51,931	0/0:12,0:12:36.08:0,36,630	0/0:40,0:40:99:0,117,2157	0/0:27,0:27:78.27:0,78,1425	0/0:33,0:33:96.33:0,96,1790	0/0:26,0:26:75.26:0,75,1370	0/0:26,0:26:72.25:0,72,1330	0/0:38,0:38:99:0,105,1950	0/0:35,0:35:99:0,105,1966	0/0:31,0:31:93.32:0,93,1741	0/0:19,0:19:54.19:0,54,999
chr10	42663524	.	GGAA	G	759.03	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.346;DP=698;FS=6.050;HRun=0;HaplotypeScore=135.0781;InbreedingCoeff=0.9994;MQ=91.92;MQ0=0;MQRankSum=-5.710;QD=36.14;ReadPosRankSum=-2.779;VQSLOD=3.4903;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,114,2558	0/0:13,0:13:36.12:0,36,822	0/0:34,0:34:70.75:0,71,1894	0/0:27,0:27:66.24:0,66,1371	1/1:1,20:21:51.17:854,51,0	0/0:21,0:21:63.22:0,63,1440	0/0:19,0:19:57.20:0,57,1315	0/0:13,0:13:30.10:0,30,692	0/0:23,0:23:69.24:0,69,1558	0/0:24,0:24:72.24:0,72,1607	0/0:21,0:21:57.20:0,57,1276	0/0:26,0:26:75.24:0,75,1663	0/0:31,0:31:93.31:0,93,1986	0/0:21,0:21:60.21:0,60,1330	0/0:28,0:28:75.26:0,75,1691	0/0:33,0:33:99:0,99,2274	0/0:34,0:34:96.33:0,96,2205	0/0:17,0:17:51.17:0,51,1152	0/0:20,0:20:60.20:0,60,1295	0/0:35,0:35:99:0,102,2268	0/0:18,0:18:51.17:0,51,1152	0/0:31,0:31:93.32:0,93,2114	0/0:25,0:25:75.22:0,75,1513	0/0:27,0:27:78.27:0,78,1707	0/0:26,0:26:75.26:0,75,1694	0/0:26,0:26:75.26:0,75,1696	0/0:25,0:25:75.25:0,75,1662	0/0:20,0:20:60.21:0,60,1384
chr10	42663533	.	GT	G	641.32	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.908;DP=707;FS=1.813;HRun=1;HaplotypeScore=107.4557;InbreedingCoeff=0.9999;MQ=91.10;MQ0=0;MQRankSum=-4.941;QD=25.65;ReadPosRankSum=-2.139;VQSLOD=3.0553;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,126,1979	0/0:13,0:13:39.13:0,39,623	0/0:36,0:36:99:0,102,1605	0/0:24,0:24:55.16:0,55,847	1/1:0,25:25:57.08:736,57,0	0/0:24,0:24:72.16:0,72,1095	0/0:23,0:23:69.24:0,69,1103	0/0:14,0:14:42.14:0,42,670	0/0:22,0:22:66.23:0,66,1053	0/0:27,0:27:81.27:0,81,1271	0/0:19,0:19:57.19:0,57,911	0/0:27,0:27:75.26:0,75,1198	0/0:31,0:31:90.29:0,90,1411	0/0:20,0:20:60.20:0,60,956	0/0:24,0:24:72.23:0,72,1128	0/0:34,0:34:99:0,102,1631	0/0:34,0:34:99:0,99,1556	0/0:17,0:17:51.17:0,51,810	0/0:17,0:17:51.15:0,51,789	0/0:33,0:33:96.31:0,96,1509	0/0:20,0:20:60.19:0,60,936	0/0:32,0:32:96.33:0,96,1534	0/0:24,0:24:72.25:0,72,1150	0/0:28,0:28:84.23:0,84,1280	0/0:27,0:27:78.24:0,78,1197	0/0:23,0:23:69.24:0,69,1104	0/0:25,0:25:75.25:0,75,1185	0/0:21,0:21:63.20:0,63,978
chr10	42663943	.	G	GGTGTGT	2761.69	PASS	AB=0.946;AC=37;AF=0.712;AN=52;BaseQRankSum=-1.856;DP=574;FS=0.000;HRun=0;HaplotypeScore=147.8183;InbreedingCoeff=0.3760;MQ=60.98;MQ0=10;MQRankSum=-0.169;QD=6.61;ReadPosRankSum=-1.236;VQSLOD=2.5267;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:43,0:45:27.21:347,27,0	1/1:2,4:8:3.01:86,3,0	./.	./.	0/0:34,0:34:8.96:0,9,87	0/0:12,0:17:8.90:0,9,129	0/0:14,0:21:8.90:0,9,125	1/1:32,0:32:18.43:183,18,0	0/0:11,0:19:12.04:0,12,157	1/1:24,0:24:13.36:92,13,0	1/1:6,0:6:1.55:4,2,0	1/1:20,0:21:11.95:193,12,0	1/1:11,0:11:8.95:84,9,0	1/1:24,0:24:9:99,9,0	0/1:16,0:16:10.22:10,0,25	1/1:18,0:18:6.02:185,6,0	0/0:19,0:18:15.02:0,15,250	0/1:13,0:13:21:21,0,28	0/1:20,0:20:45.42:197,0,45	1/1:15,0:14:9.03:184,9,0	0/1:27,9:42:50.03:130,0,50	1/1:14,0:14:14.99:180,15,0	1/1:10,0:10:6.02:99,6,0	1/1:27,0:29:14.96:195,15,0	0/1:22,0:22:3.97:97,0,4	1/1:14,0:14:1.71:26,2,0	1/1:15,0:16:12.04:218,12,0	1/1:15,0:15:21.50:298,22,0
chr10	42663959	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGCGCGTGC	T	1241.70	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.327;DP=579;FS=11.199;HRun=0;HaplotypeScore=356.4224;InbreedingCoeff=0.8140;MQ=46.98;MQ0=16;MQRankSum=-3.252;QD=37.63;ReadPosRankSum=1.555;VQSLOD=0.8589;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:38:57.18:0,57,6199	0/0:10,0:10:15.05:0,15,1253	0/0:14,0:6:12.04:0,12,304	0/0:19,0:10:20.09:0,20,695	1/1:8,25:33:23.88:1335,24,0	0/0:21,0:20:33.31:0,33,3418	0/0:26,0:26:52.12:0,52,3540	0/0:30,0:28:80.14:0,80,4092	0/0:21,0:21:33.10:0,33,2607	0/0:27,0:26:75.24:0,75,4484	0/0:15,0:15:9.03:0,9,477	0/0:22,0:22:25.02:0,25,1552	0/0:11,0:11:10.62:0,11,864	0/0:25,0:25:27.09:0,27,1508	0/0:18,0:17:21.06:0,21,1220	0/0:16,0:16:21.11:0,21,1748	0/0:20,0:19:46.01:0,46,3946	0/0:16,0:15:40.95:0,41,2427	0/0:14,0:14:42.14:0,42,3482	0/0:14,0:13:18.04:0,18,1822	0/0:39,0:38:40.64:0,41,2558	0/0:16,0:16:21.07:0,21,2149	0/0:12,0:11:12.04:0,12,871	0/0:29,0:29:14.79:0,15,1457	0/0:24,0:24:36.12:0,36,3188	0/0:20,0:20:57.20:0,57,3331	0/0:13,0:13:30.10:0,30,2122	0/0:15,0:14:41.81:0,42,4067
chr10	42663985	.	TGCGC	T	2285.76	PASS	AB=0.996;AC=28;AF=0.500;AN=56;BaseQRankSum=7.131;DP=497;FS=8.464;HRun=0;HaplotypeScore=122.7149;InbreedingCoeff=0.2849;MQ=47.53;MQ0=10;MQRankSum=-5.815;QD=7.14;ReadPosRankSum=-2.986;VQSLOD=1.3569;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:32,0:32:53.10:53,0,879	0/1:12,0:12:26.12:26,0,274	0/0:9,0:5:0.04:0,0,125	0/0:6,0:4:7.84:0,8,80	1/1:25,0:25:18.04:191,18,0	0/0:20,0:19:33.04:0,33,510	0/0:22,0:22:38.31:0,38,572	0/0:17,0:15:1.38:0,1,161	0/0:21,0:21:28.27:0,28,433	1/1:23,1:24:52.37:557,52,0	1/1:15,0:15:3:25,3,0	0/1:18,0:18:15.58:16,0,16	0/1:10,0:10:7.39:68,0,7	1/1:19,0:19:1.06:41,1,0	1/1:10,3:13:9.03:147,9,0	0/0:13,0:14:21.54:0,22,351	0/0:19,0:19:48.58:0,49,793	1/1:14,0:12:7.81:176,8,0	0/0:15,0:18:23.03:0,23,656	0/1:12,0:12:3.87:4,0,300	0/0:31,0:30:4.86:0,5,374	1/1:18,0:19:3.45:145,3,0	1/1:12,0:11:5.99:49,6,0	0/1:28,0:28:5.15:39,0,5	1/1:19,1:21:18.56:256,19,0	1/1:17,1:18:52.79:635,53,0	0/1:8,0:8:29.95:30,0,159	0/1:17,0:15:7.63:8,0,547
chr10	42663989	.	CGT	C	38.01	PASS	AB=0.956;AC=7;AF=0.125;AN=56;BaseQRankSum=6.764;DP=474;FS=2.006;HRun=0;HaplotypeScore=120.2452;InbreedingCoeff=0.1170;MQ=50.15;MQ0=7;MQRankSum=-2.880;QD=0.38;ReadPosRankSum=1.122;VQSLOD=2.5153;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,1:32:48.61:0,49,883	0/0:11,0:11:23.57:0,24,323	0/0:10,0:6:17.22:0,17,209	0/0:6,0:4:9.02:0,9,119	1/1:25,0:25:9.46:44,9,0	0/0:18,0:18:35.24:0,35,462	0/0:23,0:23:47.41:0,47,570	0/0:12,0:11:28.50:0,29,309	0/0:18,0:18:28.84:0,29,394	0/0:21,0:20:7.18:0,7,48	0/0:16,0:16:3.01:0,3,39	0/0:17,1:18:5.97:0,6,46	0/1:9,1:10:9.77:20,0,10	0/0:15,1:16:5.79:0,6,37	0/1:14,0:13:6.05:6,0,18	0/0:14,0:14:21.07:0,21,339	0/0:19,0:19:51.11:0,51,744	0/1:14,0:12:1.25:1,0,12	0/0:19,0:19:53.36:0,53,729	0/0:13,0:13:24.05:0,24,346	0/0:29,0:28:35.95:0,36,451	0/1:17,3:20:37.60:38,0,72	0/0:9,3:11:2.67:0,3,24	0/0:27,0:27:5.83:0,6,54	0/1:18,0:18:49.11:49,0,81	0/0:17,0:17:3.76:0,4,70	0/0:7,0:7:15.05:0,15,222	0/0:15,0:13:36.51:0,37,514
chr10	42663995	.	TGCGCGC	T	1777.83	PASS	AB=0.963;AC=14;AF=0.269;AN=52;BaseQRankSum=8.992;DP=473;FS=22.364;HRun=0;HaplotypeScore=133.5101;InbreedingCoeff=0.4809;MQ=58.09;MQ0=5;MQRankSum=-7.557;QD=11.32;ReadPosRankSum=2.881;VQSLOD=1.1752;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:68.26:0,68,2133	0/0:13,0:13:24.93:0,25,804	0/0:13,0:10:28.89:0,29,573	0/0:8,0:6:10.76:0,11,176	0/1:28,0:28:30.30:30,0,122	0/0:22,0:22:41.38:0,41,1199	0/0:22,0:22:53.56:0,54,1517	0/0:11,0:10:29.84:0,30,736	0/0:20,0:20:45.13:0,45,1250	1/1:24,0:23:47.06:742,47,0	./.	0/0:15,1:16:6.01:0,6,58	1/1:9,1:10:0.82:91,1,0	0/0:17,1:18:2.04:0,2,6	1/1:13,0:12:5.77:71,6,0	0/0:14,0:14:26.88:0,27,785	0/0:18,0:18:51.01:0,51,1598	1/1:11,0:10:5.60:101,6,0	0/0:20,0:20:54.02:0,54,1507	0/0:13,0:13:27.09:0,27,873	0/0:27,0:27:36.12:0,36,1073	0/1:14,3:17:52.80:179,0,53	./.	0/1:25,0:25:12.42:12,0,26	0/1:13,0:13:7.99:43,0,8	1/1:16,0:16:35.31:671,35,0	0/0:7,0:7:15.05:0,15,384	0/0:15,0:14:39.13:0,39,1230
chr10	42663999	.	CGCGCGTGCGT	C	3438.43	PASS	AB=1.000;AC=14;AF=0.269;AN=52;BaseQRankSum=9.485;DP=485;FS=11.494;HRun=0;HaplotypeScore=152.5612;InbreedingCoeff=0.6562;MQ=63.09;MQ0=4;MQRankSum=-4.881;QD=26.05;ReadPosRankSum=1.332;VQSLOD=2.7196;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:69.24:0,69,2667	0/0:12,0:12:29.69:0,30,855	0/0:14,0:10:29.43:0,29,662	0/0:12,0:10:27.08:0,27,440	0/1:28,0:28:99:170,0,202	0/0:22,0:22:44.28:0,44,1454	0/0:25,0:25:53.86:0,54,1685	0/0:11,0:11:30.10:0,30,772	0/0:22,0:22:51.14:0,51,1464	1/1:1,23:23:68.90:1326,69,0	./.	0/0:20,0:20:6.02:0,6,150	1/1:12,0:12:5.95:97,6,0	0/0:17,0:17:2.92:0,3,17	1/1:3,11:13:9.03:188,9,0	0/0:14,0:14:27.09:0,27,1034	0/0:19,0:19:54.14:0,54,1921	1/1:0,10:10:6.02:196,6,0	0/0:20,0:20:54.18:0,54,1774	0/0:14,0:14:30.10:0,30,1065	0/0:27,0:27:36.12:0,36,1151	0/1:16,0:16:69.33:175,0,69	./.	0/0:26,0:26:4.70:0,5,84	1/1:0,11:11:6.01:122,6,0	1/1:1,16:17:50.56:1164,51,0	0/0:7,0:7:15.05:0,15,423	0/0:14,0:13:39.13:0,39,1548
chr10	42664001	.	C	CGT	524.29	PASS	AB=0.869;AC=13;AF=0.250;AN=52;BaseQRankSum=5.410;DP=490;FS=3.938;HRun=0;HaplotypeScore=116.7545;InbreedingCoeff=0.6529;MQ=65.47;MQ0=3;MQRankSum=-3.101;QD=3.72;ReadPosRankSum=-0.203;VQSLOD=2.4668;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:69.01:0,69,997	0/0:12,0:12:27.06:0,27,405	0/0:15,0:11:29.11:0,29,378	0/0:13,0:11:20.75:0,21,193	0/0:28,0:28:32.95:0,33,314	0/0:22,0:22:42.01:0,42,594	0/0:25,0:25:53.74:0,54,760	0/0:15,0:15:36.10:0,36,484	0/0:22,0:22:51.03:0,51,658	0/1:24,0:23:6.20:130,0,6	./.	1/1:2,16:18:6.49:111,6,0	1/1:4,8:12:6.02:77,6,0	0/1:6,11:17:0.01:0,0,0	0/0:12,0:12:1.04:0,1,6	0/0:13,0:13:26.30:0,26,348	0/0:20,0:20:51.13:0,51,752	0/0:10,0:9:2.70:0,3,7	0/0:20,0:20:54.02:0,54,725	0/0:14,0:14:30.09:0,30,435	0/0:27,0:27:39.10:0,39,546	1/1:14,2:16:12:243,12,0	./.	1/1:6,19:27:5.72:77,6,0	1/1:11,0:11:2.04:6,2,0	0/1:16,0:16:1.66:25,0,2	0/0:7,0:7:15.05:0,15,213	0/0:14,0:13:39.13:0,39,579
chr10	42666860	.	A	AAAATAAAATT	2798.93	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=5.083;DP=431;FS=11.596;HRun=0;HaplotypeScore=124.7557;InbreedingCoeff=0.5009;MQ=66.62;MQ0=0;MQRankSum=-7.676;QD=22.76;ReadPosRankSum=-1.576;VQSLOD=1.8557;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:60.17:0,60,1698	0/0:5,0:5:15.03:0,15,294	0/0:18,0:10:19.42:0,19,329	0/0:23,0:11:4.06:0,4,196	0/0:37,0:37:99:0,105,2807	0/0:24,0:24:69.15:0,69,1901	0/0:11,0:11:29.98:0,30,573	0/0:30,0:30:90.25:0,90,2152	0/0:9,0:9:27.08:0,27,787	0/1:15,0:15:99:237,0,131	0/1:8,0:8:27.92:301,0,28	1/1:6,0:6:14.98:157,15,0	1/1:2,12:18:14.67:786,15,0	1/1:4,3:11:6.02:209,6,0	0/0:6,0:6:14.75:0,15,96	0/0:15,0:15:42.13:0,42,1256	0/0:26,0:26:72.10:0,72,1702	0/1:16,0:16:37.91:355,0,38	0/0:18,0:18:51.16:0,51,1350	0/0:20,0:20:57.15:0,57,1529	0/0:14,0:14:38.30:0,38,847	1/1:5,0:5:9.02:110,9,0	1/1:2,6:10:8.99:334,9,0	1/1:6,0:6:14.90:139,15,0	0/1:15,0:15:99:228,0,155	0/1:13,0:13:99:128,0,154	0/0:23,0:22:60.09:0,60,1288	0/0:9,0:9:27.09:0,27,888
chr10	42666863	.	AATT	A	1142.82	PASS	AB=0.738;AC=8;AF=0.143;AN=56;BaseQRankSum=5.114;DP=423;FS=18.407;HRun=0;HaplotypeScore=69.9974;InbreedingCoeff=-0.1790;MQ=64.45;MQ0=0;MQRankSum=-7.897;QD=13.60;ReadPosRankSum=-1.605;VQSLOD=1.0284;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:63.22:0,63,1515	0/0:6,0:6:18.06:0,18,427	0/0:17,0:9:20.84:0,21,458	0/0:20,0:9:16.22:0,16,208	0/0:36,0:36:99:0,108,2606	0/0:24,0:24:72.25:0,72,1750	0/0:11,0:11:33.11:0,33,797	0/0:32,0:32:96.33:0,96,2295	0/0:11,0:11:33.11:0,33,768	0/1:8,6:14:99:233,0,532	0/1:3,6:9:99:298,0,172	0/1:5,1:6:36.21:36,0,326	0/0:14,0:14:15.01:0,15,168	0/0:6,0:6:6.02:0,6,94	0/0:7,0:7:21.07:0,21,495	0/0:15,0:15:45.15:0,45,1087	0/0:26,0:26:78.24:0,78,1819	0/1:5,10:15:99:242,0,322	0/0:18,0:18:54.02:0,54,1237	0/0:21,0:21:60.21:0,60,1443	0/0:14,0:14:9.41:0,9,902	0/1:3,2:5:42.21:42,0,187	0/0:8,0:8:9.03:0,9,105	0/1:5,1:6:78.66:79,0,172	0/1:11,5:16:99:223,0,742	0/1:10,3:13:99:124,0,683	0/0:22,0:21:66.23:0,66,1556	0/0:9,0:9:27.09:0,27,666
chr10	42667795	.	G	GTTCCTT	22392.26	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=15.785;DP=649;FS=6.832;HRun=0;HaplotypeScore=158.3250;InbreedingCoeff=0.9990;MQ=82.35;MQ0=0;MQRankSum=-19.891;QD=80.55;ReadPosRankSum=-5.196;VQSLOD=4.3480;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:58:99:0,166,3728	0/0:10,0:10:30.10:0,30,709	0/0:27,0:27:66.22:0,66,1474	0/0:18,0:19:51.15:0,51,1122	1/1:5,16:23:48.12:1258,48,0	0/0:29,0:29:87.30:0,87,2057	0/0:24,0:24:72.25:0,72,1681	0/0:36,0:36:99:0,102,2354	0/0:21,0:21:60.21:0,60,1416	1/1:6,14:22:66.21:2116,66,0	1/1:0,14:15:36.04:1030,36,0	1/1:8,16:27:63.18:2009,63,0	1/1:7,11:20:45.15:1420,45,0	1/1:13,17:31:81.28:2661,81,0	1/1:4,26:31:81.28:2766,81,0	0/0:25,0:25:75.26:0,75,1774	0/0:26,0:26:69.22:0,69,1583	1/1:2,8:11:21.07:722,21,0	0/0:19,0:19:37.88:0,38,1147	0/0:21,0:21:63.22:0,63,1490	0/0:26,0:26:78.27:0,78,1800	1/1:3,17:20:57.20:1865,57,0	1/1:6,12:18:51.17:1611,51,0	1/1:4,11:15:30.10:846,30,0	1/1:5,16:20:57.15:1820,57,0	1/1:5,17:24:69.22:2268,69,0	0/0:22,0:22:66.19:0,66,1511	0/0:8,0:8:24.08:0,24,565
chr10	42668128	.	C	CA	12905.03	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=21.524;DP=713;FS=10.435;HRun=0;HaplotypeScore=145.2505;InbreedingCoeff=0.9993;MQ=84.96;MQ0=1;MQRankSum=-3.199;QD=40.71;ReadPosRankSum=6.784;VQSLOD=2.6537;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,117,1631	0/0:13,0:13:39.13:0,39,546	0/0:32,0:32:87.29:0,87,1208	0/0:22,0:22:57.18:0,57,768	1/1:1,27:28:54.18:862,54,0	0/0:21,0:21:63.20:0,63,863	0/0:18,0:18:54.18:0,54,755	0/0:35,0:34:99:0,102,1425	0/0:25,0:25:75.25:0,75,1049	1/1:1,21:22:63.19:982,63,0	1/1:0,10:10:21.07:335,21,0	1/1:0,29:29:81.27:1264,81,0	1/1:1,29:30:87.27:1359,87,0	1/1:1,24:25:69.23:1073,69,0	1/1:0,31:31:87.29:1350,87,0	0/0:30,0:30:90.26:0,90,1207	0/0:29,0:29:84.28:0,84,1174	1/1:2,19:21:60.20:941,60,0	0/0:20,0:20:60.20:0,60,833	0/0:37,0:37:99:0,108,1510	0/0:36,0:36:99:0,105,1448	1/1:0,11:11:30.10:466,30,0	1/1:0,28:28:66.23:1054,66,0	1/1:0,20:20:42.14:670,42,0	1/1:1,34:34:81.27:1279,81,0	1/1:0,27:27:81.26:1270,81,0	0/0:25,0:23:75.25:0,75,1049	0/0:14,0:14:33.11:0,33,461
chr10	42668899	.	GA	G	7397.06	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=18.949;DP=826;FS=3.929;HRun=2;HaplotypeScore=98.6101;InbreedingCoeff=0.9993;MQ=85.97;MQ0=0;MQRankSum=-3.206;QD=36.44;ReadPosRankSum=1.158;VQSLOD=5.0978;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:81.27:0,81,1214	1/1:2,8:10:27.07:336,27,0	0/0:32,0:32:90.28:0,90,1300	0/0:22,1:23:22.85:0,23,720	0/0:31,0:31:93.30:0,93,1355	0/0:27,0:27:81.26:0,81,1184	0/0:19,0:19:57.19:0,57,850	0/0:33,0:32:99:0,99,1423	0/0:35,0:35:99:0,102,1488	1/1:3,34:37:99:1338,105,0	1/1:0,20:20:57.18:738,57,0	0/0:38,0:38:99:0,114,1706	0/0:36,0:36:99:0,108,1579	0/0:27,0:27:75.25:0,75,1097	1/1:0,38:38:99:1439,111,0	0/0:39,0:39:99:0,117,1753	0/0:18,0:18:54.16:0,54,780	1/1:0,28:28:81.26:1052,81,0	0/0:21,0:21:60.20:0,60,894	0/0:35,0:35:99:0,102,1528	0/0:39,0:39:99:0,114,1688	0/0:22,0:22:63.20:0,63,925	0/0:36,0:36:99:0,102,1506	0/0:30,0:30:90.30:0,90,1344	1/1:1,30:31:84.27:1091,84,0	1/1:2,37:39:99:1402,111,0	0/0:33,0:33:99:0,99,1419	0/0:21,0:21:60.16:0,60,849
chr10	42669544	.	C	CA	2159.26	PASS	AB=1.000;AC=16;AF=0.286;AN=56;BaseQRankSum=-6.584;DP=528;FS=0.461;HRun=9;HaplotypeScore=70.6101;InbreedingCoeff=0.8500;MQ=63.30;MQ0=2;MQRankSum=0.892;QD=14.79;ReadPosRankSum=0.638;VQSLOD=3.7689;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,107,933	1/1:1,3:5:8.86:80,9,0	0/1:10,0:6:2.88:3,0,21	0/1:13,0:9:2.48:2,0,20	0/0:22,1:23:18.98:0,19,382	0/0:24,0:25:58.01:0,58,474	0/0:17,1:18:8.80:0,9,305	0/0:33,0:33:67.84:0,68,560	0/0:13,0:14:35.01:0,35,289	1/1:8,11:19:36.03:374,36,0	1/1:3,12:15:33.05:352,33,0	0/0:15,0:16:31.98:0,32,260	0/0:19,0:19:38.96:0,39,338	0/0:17,0:18:41.01:0,41,344	1/1:6,12:18:33.09:365,33,0	0/0:16,0:16:32.96:0,33,284	0/0:27,0:27:62.95:0,63,546	1/1:7,20:27:39.11:431,39,0	0/0:21,0:21:53.93:0,54,460	0/0:26,0:26:65.97:0,66,573	0/0:19,0:19:47.96:0,48,412	0/0:9,1:10:8.96:0,9,75	0/0:11,0:11:26.98:0,27,230	0/0:8,0:8:17.48:0,17,136	1/1:7,20:27:45.12:497,45,0	1/1:4,8:12:24.03:248,24,0	0/0:24,1:25:24.19:0,24,436	0/0:10,0:10:29.99:0,30,260
chr10	42669561	.	G	GA	2706.64	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-10.423;DP=534;FS=10.462;HRun=8;HaplotypeScore=67.8564;InbreedingCoeff=0.9814;MQ=62.48;MQ0=2;MQRankSum=0.904;QD=25.53;ReadPosRankSum=1.803;VQSLOD=4.1178;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:93.19:0,93,820	0/0:6,0:6:18.01:0,18,165	0/0:8,0:4:9:0,9,82	0/0:12,0:11:24.73:0,25,208	1/1:1,18:19:54.16:623,54,0	0/0:25,0:24:46.22:0,46,557	0/0:23,0:23:54:0,54,488	0/0:33,0:33:83.95:0,84,746	0/0:13,0:13:27.01:0,27,247	0/0:15,0:15:42.01:0,42,381	0/0:18,0:18:50.98:0,51,455	1/1:1,15:16:36.11:416,36,0	1/1:2,16:18:45.13:519,45,0	1/1:2,20:22:48.14:554,48,0	0/0:17,0:17:45.02:0,45,412	0/0:13,0:13:36.01:0,36,325	0/0:26,0:26:63.02:0,63,577	0/0:23,0:23:51:0,51,460	0/0:27,0:27:66.02:0,66,603	0/0:29,0:29:78.03:0,78,713	0/0:21,0:21:57.03:0,57,522	1/1:1,4:5:12.03:134,12,0	1/1:4,11:15:30.08:346,30,0	1/1:1,10:11:27.08:312,27,0	0/0:25,0:25:63.01:0,63,571	0/0:19,0:19:57.01:0,57,515	0/0:22,0:22:57.02:0,57,521	0/0:12,0:12:33.02:0,33,302
chr10	42670814	.	T	TCC	5222.96	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=2.656;DP=711;FS=4.021;HRun=7;HaplotypeScore=101.3234;InbreedingCoeff=0.9995;MQ=79.80;MQ0=0;MQRankSum=-2.396;QD=37.31;ReadPosRankSum=4.736;VQSLOD=4.3196;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,105,1184	0/0:10,0:10:24.04:0,24,266	0/0:21,0:21:39.04:0,39,427	0/0:24,0:23:56.89:0,57,600	0/0:19,0:19:54.16:0,54,629	0/0:26,0:26:72.18:0,72,818	0/0:19,0:19:48.12:0,48,549	0/0:33,0:33:57.05:0,57,629	0/0:29,0:29:75.21:0,75,873	0/0:31,0:31:84.22:0,84,968	0/0:19,0:19:52.02:0,52,586	1/1:2,16:21:52.64:765,53,0	1/1:6,20:28:63.21:1021,63,0	1/1:4,30:35:72.25:1174,72,0	0/0:26,0:26:72.18:0,72,808	0/0:24,0:24:66.17:0,66,757	0/0:33,0:33:84.22:0,84,968	0/0:30,0:30:73.85:0,74,901	0/0:20,0:20:42.10:0,42,479	0/0:23,0:23:63.13:0,63,703	0/0:41,0:41:99:0,99,1105	1/1:1,19:20:51.17:837,51,0	1/1:1,14:15:42.14:689,42,0	1/1:2,18:21:45.15:738,45,0	0/0:23,0:23:66.18:0,66,759	0/0:25,0:25:60.16:0,60,699	0/0:28,0:28:72.20:0,72,838	0/0:20,0:20:51.13:0,51,583
chr10	42671242	.	CTTT	C	5189.05	PASS	AB=0.622;AC=28;AF=0.500;AN=56;BaseQRankSum=7.920;DP=518;FS=0.000;HRun=13;HaplotypeScore=114.0093;InbreedingCoeff=0.8696;MQ=62.70;MQ0=1;MQRankSum=-4.219;QD=20.35;ReadPosRankSum=5.456;VQSLOD=3.5701;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:42:99:0,114,1849	1/1:0,11:12:28.42:362,28,0	0/0:7,0:5:12:0,12,172	0/0:9,0:8:12.03:0,12,178	0/1:4,11:15:0.20:231,0,0	0/0:11,0:13:30.08:0,30,520	0/0:23,0:28:72.14:0,72,1146	0/0:16,0:37:81.96:0,82,629	0/0:19,0:25:51.14:0,51,844	1/1:6,10:17:22.33:289,22,0	1/1:0,8:8:6.59:105,7,0	1/1:1,13:14:30.06:362,30,0	1/1:4,16:20:39.07:472,39,0	1/1:1,15:16:33.06:400,33,0	1/1:5,20:25:45.06:545,45,0	0/0:14,0:16:36.11:0,36,615	0/0:19,0:22:57.12:0,57,915	1/1:6,13:20:37.41:471,37,0	0/0:18,0:22:56.86:0,57,516	0/0:9,0:14:29.45:0,29,248	0/0:2,0:7:13.21:0,13,97	1/1:4,11:17:24.79:280,25,0	1/1:1,14:16:23.66:273,24,0	1/1:1,11:13:25.43:325,25,0	1/1:4,17:21:26.94:327,27,0	1/1:9,24:33:45.33:733,45,0	0/0:10,0:18:49.10:0,49,439	0/1:4,1:8:12.51:13,0,166
chr10	42671533	.	TA	T	4407.03	PASS	AB=0.817;AC=40;AF=0.714;AN=56;BaseQRankSum=8.217;DP=594;FS=12.216;HRun=13;HaplotypeScore=97.7893;InbreedingCoeff=0.8362;MQ=69.15;MQ0=2;MQRankSum=-1.261;QD=10.25;ReadPosRankSum=2.595;VQSLOD=3.0112;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:55.16:0,55,309	1/1:1,7:9:16.94:115,17,0	0/1:24,1:21:3.80:4,0,142	0/0:15,0:11:15.02:0,15,145	1/1:4,0:20:24.40:71,24,0	0/0:23,0:25:50.72:0,51,450	0/0:17,0:19:35.71:0,36,313	1/1:6,17:24:40.72:288,41,0	0/0:26,0:26:69.05:0,69,644	1/1:6,15:21:44.71:328,45,0	1/1:2,9:11:26.84:197,27,0	1/1:1,0:15:25.69:75,26,0	1/1:2,0:22:33.65:97,34,0	1/1:1,0:14:22.40:66,22,0	1/1:7,22:30:64.65:465,65,0	0/0:26,1:27:29.83:0,30,230	0/0:24,1:25:34.79:0,35,192	1/1:7,15:22:41.73:306,42,0	0/1:7,5:12:37.48:88,0,37	1/1:10,27:37:41.90:467,42,0	1/1:2,10:12:8.99:195,9,0	1/1:3,0:27:36.64:107,37,0	1/1:3,0:16:22.39:65,22,0	1/1:6,0:22:26.08:77,26,0	1/1:7,14:21:44.64:327,45,0	1/1:6,27:33:77.46:565,77,0	1/1:7,18:25:47.67:350,48,0	1/1:4,7:11:20.84:153,21,0
chr10	42672763	.	C	CATCT	7362.69	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-12.180;DP=708;FS=1.357;HRun=0;HaplotypeScore=116.7643;InbreedingCoeff=0.9964;MQ=81.55;MQ0=0;MQRankSum=-4.425;QD=72.18;ReadPosRankSum=3.155;VQSLOD=7.2055;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,32:40:99:2762,99,0	0/0:6,0:6:18.06:0,18,360	0/0:26,0:26:75.25:0,75,1437	0/0:19,0:19:45.15:0,45,821	0/0:26,0:26:72.25:0,72,1437	0/0:25,0:25:69.22:0,69,1342	0/0:25,0:25:72.25:0,72,1434	0/0:21,0:21:60.20:0,60,1146	0/0:26,0:26:78.27:0,78,1553	0/0:26,0:26:75.24:0,75,1430	0/0:20,0:20:57.20:0,57,1122	0/0:33,0:33:96.33:0,96,1912	0/0:34,0:34:96.33:0,96,1886	0/0:33,0:33:99:0,99,1908	0/0:35,0:35:99:0,99,1976	1/1:2,31:36:99:2766,99,0	1/1:3,21:26:66.23:1835,66,0	0/0:26,0:26:72.23:0,72,1387	0/0:17,0:16:51.17:0,51,963	0/0:20,0:20:57.20:0,57,1104	0/0:29,0:29:84.29:0,84,1660	0/0:24,0:24:69.20:0,69,1306	0/0:13,0:13:39.13:0,39,777	0/0:34,0:34:99:0,99,1962	0/0:29,0:29:87.28:0,87,1667	0/0:31,0:31:90.28:0,90,1726	0/0:20,0:20:60.20:0,60,1164	0/0:8,0:8:24.08:0,24,479
chr10	42673231	.	G	GT	5529.93	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-16.352;DP=737;FS=0.000;HRun=7;HaplotypeScore=80.6346;InbreedingCoeff=1.0000;MQ=83.50;MQ0=0;MQRankSum=-5.651;QD=29.73;ReadPosRankSum=2.722;VQSLOD=5.1712;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:84.13:0,84,810	1/1:0,13:13:39.12:471,39,0	0/0:25,0:24:60.05:0,60,566	0/0:29,0:29:54.02:0,54,503	0/0:31,0:31:78.09:0,78,742	0/0:24,0:24:66.10:0,66,637	0/0:21,0:21:54.07:0,54,516	0/0:31,0:31:78.12:0,78,753	0/0:34,0:34:96.13:0,96,921	1/1:5,29:33:61.28:1010,61,0	1/1:1,29:30:81.25:978,81,0	0/0:40,0:40:99:0,102,967	0/0:27,0:27:81.13:0,81,780	0/0:21,0:21:60.09:0,60,579	1/1:4,29:34:87.13:1029,87,0	0/0:27,0:27:75.11:0,75,718	0/0:22,0:22:54.07:0,54,516	1/1:4,21:27:43.24:604,43,0	0/0:18,0:18:51.08:0,51,492	0/0:27,0:27:75.10:0,75,720	0/0:21,0:21:57.07:0,57,543	0/0:36,0:36:96.13:0,96,921	0/0:23,0:23:66.10:0,66,636	0/0:13,0:13:39.06:0,39,377	1/1:1,27:28:69.21:834,69,0	1/1:1,19:20:51.14:603,51,0	0/0:35,0:34:99:0,99,948	0/0:15,0:15:45.07:0,45,435
chr10	42673562	.	CT	C	3742.04	PASS	AB=0.848;AC=47;AF=0.839;AN=56;BaseQRankSum=7.373;DP=592;FS=0.483;HRun=13;HaplotypeScore=104.9039;InbreedingCoeff=0.3896;MQ=74.06;MQ0=0;MQRankSum=-1.253;QD=6.71;ReadPosRankSum=6.089;VQSLOD=2.4973;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,20:33:50.06:345,50,0	1/1:4,1:9:14.05:54,14,0	0/1:17,0:15:6.35:6,0,85	0/1:14,0:14:17.54:18,0,55	0/0:23,0:23:44.18:0,44,377	0/1:20,4:25:18.77:19,0,442	0/0:11,0:11:5.18:0,5,199	1/1:16,7:23:14.70:109,15,0	0/1:15,3:18:1.54:2,0,292	1/1:8,0:23:15.07:62,15,0	1/1:7,1:30:37.56:122,38,0	1/1:2,0:15:18.33:54,18,0	1/1:1,0:20:36.67:108,37,0	1/1:1,0:20:32.59:96,33,0	1/1:2,0:23:34.47:100,34,0	1/1:4,15:19:15.56:277,16,0	1/1:4,23:28:67.26:475,67,0	1/1:3,1:21:35.56:116,36,0	0/1:7,16:25:22.69:310,0,23	1/1:8,25:35:38.21:381,38,0	1/1:2,6:8:14.90:109,15,0	1/1:1,0:24:42.76:125,43,0	1/1:3,0:29:44.79:131,45,0	1/1:0,0:13:24.44:72,24,0	1/1:2,0:31:50.90:147,51,0	1/1:2,1:21:39.64:128,40,0	1/1:6,17:24:43.72:312,44,0	1/1:6,3:9:8.91:66,9,0
chr10	42674034	.	T	TCCC	4294.67	PASS	AB=0.557;AC=21;AF=0.375;AN=56;BaseQRankSum=4.871;DP=709;FS=0.928;HRun=7;HaplotypeScore=112.3088;InbreedingCoeff=0.9437;MQ=75.27;MQ0=0;MQRankSum=-3.028;QD=15.45;ReadPosRankSum=2.120;VQSLOD=1.2392;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,0:51:48.34:114,48,0	1/1:0,11:11:21.07:435,21,0	0/0:22,0:21:50.80:0,51,626	0/0:22,0:21:35.28:0,35,478	1/1:2,0:20:44.82:346,45,0	0/0:41,0:41:99:0,120,1621	0/0:30,0:30:87.19:0,87,1100	0/0:28,0:27:54.12:0,54,710	0/0:23,0:23:60.17:0,60,802	0/0:22,0:22:51.14:0,51,693	0/0:15,0:15:35.43:0,35,437	1/1:3,17:20:27.09:560,27,0	1/1:4,17:22:23.66:497,24,0	1/1:5,21:28:33.01:636,33,0	0/0:31,0:31:87.23:0,87,1137	0/1:7,0:34:2.75:59,0,3	1/1:3,0:24:19.61:45,20,0	0/0:22,0:22:48.51:0,49,729	0/0:26,0:26:72.23:0,72,968	0/0:23,0:23:60.18:0,60,802	0/0:36,0:36:96.25:0,96,1242	1/1:4,11:17:30.10:618,30,0	1/1:7,13:21:11.83:247,12,0	1/1:7,21:29:38.94:737,39,0	0/0:22,0:22:63.17:0,63,825	0/0:30,0:30:81.17:0,81,1080	0/0:27,0:27:78.20:0,78,999	0/0:11,0:11:30.10:0,30,409
chr10	42675562	.	CACATCCAGGGCT	C	1325.58	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.731;DP=814;FS=1.060;HRun=0;HaplotypeScore=273.7541;InbreedingCoeff=0.9844;MQ=90.25;MQ0=0;MQRankSum=-6.166;QD=88.37;ReadPosRankSum=1.359;VQSLOD=3.2157;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:81.28:0,81,4826	1/1:0,15:15:39.13:1420,39,0	0/0:38,0:38:99:0,114,5673	0/0:24,0:24:69.21:0,69,3374	0/0:33,0:33:99:0,99,5965	0/0:16,0:16:48.16:0,48,2747	0/0:29,0:29:87.30:0,87,4876	0/0:40,0:40:99:0,117,6573	0/0:27,0:27:81.28:0,81,5005	0/0:42,0:42:99:0,126,7063	0/0:21,0:21:63.22:0,63,3815	0/0:32,0:32:93.32:0,93,5892	0/0:33,0:33:99:0,99,5810	0/0:32,0:32:93.32:0,93,5546	0/0:49,0:49:99:0,148,9026	0/0:42,0:42:99:0,123,7319	0/0:28,0:28:84.29:0,84,4769	0/0:26,0:26:75.21:0,75,4167	0/0:20,0:20:60.20:0,60,3159	0/0:37,0:37:99:0,108,6720	0/0:43,0:43:99:0,126,7413	0/0:30,0:30:90.31:0,90,5183	0/0:22,0:22:66.21:0,66,3681	0/0:30,0:30:87.30:0,87,5311	0/0:29,0:29:87.30:0,87,5356	0/0:27,0:27:81.26:0,81,4267	0/0:16,0:16:48.16:0,48,2911	0/0:5,0:5:15.05:0,15,954
chr10	42676201	.	G	GGA	12313.25	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-17.578;DP=770;FS=1.642;HRun=0;HaplotypeScore=95.4703;InbreedingCoeff=0.9984;MQ=80.82;MQ0=7;MQRankSum=-1.707;QD=44.45;ReadPosRankSum=4.143;VQSLOD=6.6303;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,39:44:99:1980,108,0	0/0:8,0:8:18.06:0,18,257	0/0:23,0:23:49.08:0,49,736	0/0:27,0:27:70.08:0,70,954	0/0:38,0:38:99:0,108,1506	0/0:27,0:27:72.24:0,72,1031	0/0:22,0:22:63.20:0,63,885	0/0:44,0:44:99:0,120,1684	0/0:17,0:17:48.14:0,48,668	0/0:29,0:29:87.28:0,87,1216	0/0:24,0:24:66.22:0,66,943	1/1:2,26:27:66.23:1210,66,0	1/1:1,23:23:63.22:1153,63,0	1/1:1,23:25:57.20:1045,57,0	0/0:36,0:36:99:0,102,1442	1/1:2,28:30:69.12:1261,69,0	1/1:2,23:25:60.21:1100,60,0	0/0:23,0:23:48.66:0,49,802	0/0:25,0:25:69.23:0,69,986	0/0:33,0:33:93.31:0,93,1331	0/0:31,0:31:84.28:0,84,1201	1/1:2,31:33:84.29:1540,84,0	1/1:0,29:29:75.26:1375,75,0	1/1:0,33:34:90.31:1650,90,0	0/0:18,0:18:51.17:0,51,730	0/0:32,0:32:96.32:0,96,1372	0/0:28,0:28:81.26:0,81,1141	0/0:8,0:8:24.08:0,24,344
chr10	42677280	.	TCTGA	T	525.08	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.855;DP=852;FS=0.000;HRun=0;HaplotypeScore=149.6896;InbreedingCoeff=0.9955;MQ=91.92;MQ0=0;MQRankSum=-2.371;QD=47.73;ReadPosRankSum=0.667;VQSLOD=4.3176;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,108,2847	1/1:0,11:11:33.11:620,33,0	0/0:33,0:33:93.30:0,93,2357	0/0:40,0:40:84.34:0,84,2604	0/0:28,0:28:78.27:0,78,2067	0/0:26,0:26:72.25:0,72,1940	0/0:37,0:37:99:0,111,2926	0/0:26,0:26:75.26:0,75,2014	0/0:28,0:28:78.27:0,78,2083	0/0:35,0:35:99:0,105,2803	0/0:12,0:12:33.11:0,33,904	0/0:41,0:41:99:0,123,3196	0/0:27,0:27:81.26:0,81,2149	0/0:37,0:37:99:0,108,2957	0/0:45,0:45:99:0,129,3407	0/0:39,0:39:99:0,117,3165	0/0:42,0:42:99:0,123,3364	0/0:25,0:25:69.24:0,69,1849	0/0:26,0:26:72.25:0,72,1973	0/0:29,0:29:84.29:0,84,2301	0/0:46,0:46:99:0,132,3615	0/0:32,0:32:90.03:0,90,2379	0/0:21,0:21:60.21:0,60,1638	0/0:29,0:29:84.29:0,84,2260	0/0:16,0:16:48.12:0,48,1197	0/0:35,0:35:99:0,102,2690	0/0:39,0:39:99:0,111,2973	0/0:9,0:9:21.07:0,21,575
chr10	42678182	.	CA	C	676.64	PASS	AB=0.978;AC=9;AF=0.161;AN=56;BaseQRankSum=14.186;DP=610;FS=2.642;HRun=3;HaplotypeScore=78.9916;InbreedingCoeff=0.5238;MQ=86.38;MQ0=0;MQRankSum=-2.088;QD=4.80;ReadPosRankSum=4.063;VQSLOD=0.6855;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:84.26:0,84,1220	0/0:5,0:5:15.05:0,15,223	0/0:28,0:28:75.20:0,75,1025	0/0:17,0:17:50.55:0,51,619	0/0:39,0:39:99:0,114,1541	0/0:21,0:21:60.20:0,60,896	0/0:18,0:18:54.18:0,54,806	0/0:23,0:23:69.21:0,69,994	0/0:21,0:21:63.20:0,63,914	0/1:26,1:27:5.78:124,0,6	1/1:21,1:22:2.47:147,2,0	0/0:21,0:21:63.18:0,63,883	0/0:24,0:24:69.21:0,69,988	0/0:16,1:17:21.67:0,22,605	1/1:19,1:20:3.17:167,3,0	0/0:16,0:16:48.13:0,48,674	0/0:21,0:21:63.17:0,63,886	0/1:17,0:17:2.93:96,0,3	0/0:14,0:14:42.13:0,42,607	0/0:35,0:35:99:0,105,1485	0/0:17,0:17:48.14:0,48,685	0/0:19,0:19:57.18:0,57,831	0/0:26,0:26:75.18:0,75,1010	0/0:14,0:14:42.14:0,42,616	1/1:22,0:22:3.25:139,3,0	0/1:32,1:33:14.93:136,0,15	0/0:33,0:32:96.17:0,96,1280	0/0:11,0:11:30.10:0,30,438
chr10	42678183	.	AC	A	4083.18	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=9.847;DP=614;FS=4.418;HRun=6;HaplotypeScore=68.3535;InbreedingCoeff=0.9878;MQ=86.22;MQ0=0;MQRankSum=-2.763;QD=28.75;ReadPosRankSum=2.977;VQSLOD=4.5042;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:81.26:0,81,1066	0/0:5,0:5:15.05:0,15,197	0/0:28,0:28:72.22:0,72,901	0/0:17,0:17:46.70:0,47,576	0/0:40,0:40:99:0,108,1385	0/0:21,0:21:63.18:0,63,801	0/0:18,0:18:54.18:0,54,711	0/0:23,0:23:66.20:0,66,851	0/0:21,0:21:63.18:0,63,799	1/1:4,24:28:78.19:833,78,0	1/1:3,19:22:57.14:611,57,0	0/0:21,0:21:60.17:0,60,771	0/0:24,0:24:69.21:0,69,893	0/0:17,0:17:10.37:0,10,475	1/1:3,17:20:54.13:577,54,0	0/0:16,0:16:45.14:0,45,576	0/0:21,0:21:60.20:0,60,790	1/1:2,15:17:45.11:484,45,0	0/0:16,0:16:42.06:0,42,517	0/0:35,0:35:96.31:0,96,1263	0/0:17,0:17:45.15:0,45,592	0/0:19,0:19:57.19:0,57,749	0/0:25,0:25:66.21:0,66,856	0/0:15,0:15:45.06:0,45,553	1/1:2,20:22:57.14:612,57,0	1/1:4,29:33:90.22:967,90,0	0/0:32,0:31:84.26:0,84,1088	0/0:11,0:11:30.10:0,30,395
chr10	42678247	.	A	AT	7717.14	PASS	AB=0.588;AC=27;AF=0.482;AN=56;BaseQRankSum=-8.729;DP=580;FS=20.333;HRun=9;HaplotypeScore=66.6683;InbreedingCoeff=0.9250;MQ=84.05;MQ0=0;MQRankSum=-4.326;QD=24.58;ReadPosRankSum=-2.131;VQSLOD=3.1502;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:56.94:0,57,490	1/1:0,7:7:11.99:119,12,0	0/0:24,0:24:58.91:0,59,489	0/0:14,0:13:32.99:0,33,285	1/1:9,29:38:82.20:1115,82,0	0/0:19,0:19:53.99:0,54,469	0/0:24,0:24:56.95:0,57,490	1/1:9,22:31:60.16:657,60,0	0/0:22,0:22:53.97:0,54,469	1/1:6,10:16:36.09:391,36,0	1/1:4,24:28:52.48:796,52,0	0/0:19,0:19:53.98:0,54,468	0/0:24,0:24:59.98:0,60,521	0/0:20,0:20:50.97:0,51,442	1/1:3,15:18:48.09:517,48,0	0/0:14,0:14:38.98:0,39,335	0/0:17,0:17:47.98:0,48,416	0/1:6,14:20:17.80:433,0,18	1/1:5,13:18:39.11:431,39,0	1/1:4,20:25:56.87:572,57,0	1/1:3,16:19:42.11:465,42,0	0/0:10,0:10:23.99:0,24,208	0/0:14,0:14:32.95:0,33,278	0/0:22,0:21:56.98:0,57,495	1/1:8,14:22:48.12:518,48,0	1/1:10,11:21:36.09:390,36,0	1/1:7,23:29:66.14:714,66,0	1/1:2,19:21:54.15:597,54,0
chr10	42678352	.	A	AT	6431.47	PASS	AB=0.875;AC=15;AF=0.268;AN=56;BaseQRankSum=-15.174;DP=644;FS=1.101;HRun=1;HaplotypeScore=69.0465;InbreedingCoeff=0.9040;MQ=78.63;MQ0=0;MQRankSum=-0.205;QD=38.51;ReadPosRankSum=-1.326;VQSLOD=4.8979;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,105,1346	0/1:6,1:7:23.90:24,0,213	0/0:30,0:30:87.24:0,87,1094	0/0:21,0:22:60.07:0,60,715	1/1:0,16:16:48.16:719,48,0	0/0:28,0:28:84.26:0,84,1075	0/0:18,0:18:54.14:0,54,670	0/0:18,0:18:51.17:0,51,662	0/0:24,0:24:72.22:0,72,919	1/1:0,32:33:96.29:1393,96,0	1/1:1,12:13:30.10:450,30,0	0/0:30,0:30:81.26:0,81,1051	0/0:26,0:26:72.23:0,72,935	0/0:16,0:16:42.14:0,42,543	1/1:0,29:29:78.26:1169,78,0	0/0:23,0:23:66.20:0,66,843	0/0:31,0:31:93.30:0,93,1205	1/1:0,19:19:45.15:674,45,0	0/0:12,0:12:33.11:0,33,429	0/0:27,0:27:81.26:0,81,1051	0/0:37,0:37:99:0,108,1398	0/0:12,0:12:36.12:0,36,467	0/0:23,0:23:69.21:0,69,881	0/0:24,0:24:66.20:0,66,843	1/1:0,20:20:57.19:855,57,0	1/1:3,27:30:81.22:1147,81,0	0/0:35,0:35:99:0,99,1268	0/0:4,0:4:12.04:0,12,156
chr10	42678905	.	T	TTTG	2240.93	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=5.861;DP=613;FS=17.684;HRun=0;HaplotypeScore=119.7704;InbreedingCoeff=0.9494;MQ=62.68;MQ0=16;MQRankSum=-4.358;QD=17.37;ReadPosRankSum=-3.406;VQSLOD=1.7595;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:20.66:0,21,285	0/0:5,0:4:6.02:0,6,89	0/0:39,0:27:42.08:0,42,568	0/0:26,0:19:30.34:0,30,409	0/0:32,0:32:44.81:0,45,624	0/0:32,0:32:72.21:0,72,1001	0/0:18,0:18:54.15:0,54,759	0/0:26,0:26:51.16:0,51,738	0/0:18,0:18:48.14:0,48,659	0/0:33,0:33:63.20:0,63,918	0/0:19,0:18:15.05:0,15,222	1/1:2,12:12:15.03:301,15,0	1/1:15,12:23:26.96:379,27,0	1/1:9,9:15:18:270,18,0	0/0:21,0:20:48.08:0,48,662	0/0:36,0:36:93.30:0,93,1345	0/0:23,0:23:65.20:0,65,873	0/0:12,0:12:24.08:0,24,350	0/0:16,0:14:21.04:0,21,292	0/0:19,0:19:47.83:0,48,612	0/0:12,0:12:19.21:0,19,259	1/1:6,14:19:26.92:302,27,0	1/1:2,11:11:12:175,12,0	1/1:22,14:28:57.09:998,57,0	0/0:15,0:15:32.94:0,33,412	0/0:22,0:22:42.14:0,42,624	0/0:33,0:33:37.91:0,38,404	0/0:6,0:6:9.03:0,9,134
chr10	42678917	.	G	GGAGAGAGA	4315.91	PASS	AB=0.926;AC=28;AF=0.500;AN=56;BaseQRankSum=-2.500;DP=640;FS=0.000;HRun=0;HaplotypeScore=192.4498;InbreedingCoeff=0.5382;MQ=53.98;MQ0=22;MQRankSum=-5.013;QD=11.86;ReadPosRankSum=-4.033;VQSLOD=2.6527;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:3.01:0,3,49	1/1:6,0:5:5.49:173,5,0	0/0:30,0:15:5.22:0,5,33	0/0:24,0:13:2.84:0,3,14	1/1:24,0:23:9.92:73,10,0	0/0:30,0:33:63.21:0,63,1210	0/0:22,0:23:12.14:0,12,705	1/1:33,0:33:38.67:452,39,0	0/0:16,0:19:41.99:0,42,788	1/1:33,0:31:24.20:374,24,0	1/1:21,0:18:11.58:76,12,0	0/0:14,0:12:4.38:0,4,93	0/0:20,0:16:19.41:0,19,312	0/0:18,0:15:6.33:0,6,99	1/1:25,0:23:14.17:103,14,0	0/1:35,0:35:77.55:78,0,455	0/1:24,0:24:9.74:10,0,510	1/1:10,0:10:6.46:132,6,0	1/1:23,2:24:33.09:947,33,0	1/1:22,1:32:36.29:658,36,0	1/1:9,0:14:0.23:34,0,0	0/0:19,0:17:11.94:0,12,139	0/1:14,0:12:8.32:8,0,89	0/0:34,0:30:23.51:0,24,646	0/0:16,0:16:0.47:0,0,1	1/1:22,0:21:21.48:396,21,0	1/1:12,15:30:25.80:795,26,0	0/1:7,0:12:8.02:8,0,8
chr10	42678946	.	GAA	G	4534.15	PASS	AB=0.991;AC=29;AF=0.518;AN=56;BaseQRankSum=5.682;DP=733;FS=21.845;HRun=3;HaplotypeScore=128.8501;InbreedingCoeff=0.2100;MQ=55.58;MQ0=15;MQRankSum=0.981;QD=8.72;ReadPosRankSum=-3.306;VQSLOD=-0.0510;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:1,22:23:3.01:46,3,0	0/1:10,0:9:1.01:1,0,163	0/0:32,0:17:40.24:0,40,388	0/0:33,0:15:28.73:0,29,265	0/1:31,0:29:9.96:140,0,10	0/0:38,0:38:23.09:0,23,1167	0/0:17,0:17:13.39:0,13,621	0/1:45,0:45:15.44:15,0,840	0/0:20,0:20:28.78:0,29,628	0/1:34,0:33:99:210,0,148	1/1:22,0:20:9.72:182,10,0	1/1:12,5:16:24.57:243,25,0	1/1:23,5:27:50.16:604,50,0	1/1:16,4:19:26.66:264,27,0	1/1:32,0:29:26.83:206,27,0	0/1:25,1:26:82.57:339,0,83	0/1:31,2:33:50.48:467,0,50	0/1:11,0:11:15.32:66,0,15	0/0:17,0:15:12.41:0,12,469	0/1:31,0:30:13.44:13,0,422	0/1:25,0:25:21.27:21,0,287	1/1:15,3:16:32.98:303,33,0	1/1:15,3:17:20.55:195,21,0	1/1:30,19:46:95.16:942,95,0	0/1:11,0:24:4.87:17,0,5	0/1:23,0:22:93.79:258,0,94	0/0:34,0:33:66.33:0,66,577	0/0:20,0:20:1.86:0,2,280
chr10	42678948	.	A	AAG	1850.95	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=1.529;DP=734;FS=1.838;HRun=0;HaplotypeScore=142.5801;InbreedingCoeff=0.5853;MQ=56.08;MQ0=14;MQRankSum=0.410;QD=7.74;ReadPosRankSum=-3.680;VQSLOD=2.7941;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:2.68:0,3,11	0/0:10,0:9:18.01:0,18,201	0/0:32,0:17:38.81:0,39,404	0/0:35,0:17:32.39:0,32,337	1/1:29,0:27:7.98:35,8,0	0/0:40,0:40:90.26:0,90,1079	0/0:19,0:19:42.11:0,42,494	0/0:46,0:46:74.84:0,75,917	0/0:20,0:20:46.69:0,47,544	1/1:14,17:30:46.78:647,47,0	1/1:7,13:18:33.02:393,33,0	0/0:17,0:16:4.36:0,4,18	0/1:26,0:25:17.73:18,0,51	0/1:20,0:19:13.41:17,0,13	1/1:16,17:31:6.02:76,6,0	0/0:27,0:27:4.19:0,4,143	0/0:33,0:33:29.91:0,30,182	1/1:2,9:11:9.03:132,9,0	0/0:16,0:14:32.82:0,33,335	0/0:31,0:30:48.32:0,48,462	0/0:26,0:27:4.99:0,5,412	0/1:19,0:18:20.88:37,0,21	0/0:17,0:16:6.46:0,6,26	0/0:49,0:46:38.97:0,39,160	1/1:24,1:25:2.99:23,3,0	1/1:10,14:23:42.14:654,42,0	0/0:33,0:32:38.42:0,38,511	0/0:20,0:20:25.75:0,26,328
chr10	42678950	.	G	GAGAGAGAGAGAA	176.68	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=4.711;DP=742;FS=1.746;HRun=0;HaplotypeScore=269.6737;InbreedingCoeff=0.3958;MQ=56.74;MQ0=12;MQRankSum=-4.580;QD=1.65;ReadPosRankSum=-3.872;VQSLOD=1.7213;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:6.01:0,6,119	0/0:10,0:9:21.03:0,21,398	0/0:28,0:17:30.10:0,30,574	0/0:36,0:19:41.88:0,42,648	1/1:13,16:28:18.10:111,18,0	0/0:40,0:40:99:0,99,2544	0/0:19,0:19:48.14:0,48,1319	0/0:47,0:47:32.98:0,33,1712	0/0:20,0:20:51.16:0,51,1395	0/0:31,0:30:37.96:0,38,494	0/0:21,0:19:0.45:0,0,3	0/0:17,0:16:14.28:0,14,246	0/0:26,0:25:40.92:0,41,762	0/0:21,0:20:20.76:0,21,287	0/0:34,0:31:2.75:0,3,25	0/0:28,0:28:36.07:0,36,959	0/0:32,0:32:62.43:0,62,1334	0/0:11,0:11:8.64:0,9,55	0/1:16,0:14:23.33:23,0,523	0/0:31,0:30:16.34:0,16,773	0/0:27,0:27:23.13:0,23,869	0/0:21,0:20:18.72:0,19,295	0/0:15,0:15:17.51:0,18,287	0/0:51,0:48:58.56:0,59,1285	0/1:26,0:26:0.22:1,0,0	0/0:26,0:25:30.67:0,31,197	0/1:35,0:34:99:154,0,827	0/0:20,0:20:29.30:0,29,580
chr10	42683006	.	AG	A	5611.51	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=10.005;DP=841;FS=5.498;HRun=3;HaplotypeScore=82.8804;InbreedingCoeff=0.9998;MQ=84.91;MQ0=0;MQRankSum=-0.777;QD=33.80;ReadPosRankSum=-1.849;VQSLOD=4.4948;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:58:99:0,172,2443	0/0:20,0:20:60.20:0,60,863	0/0:21,0:21:57.13:0,57,742	0/0:30,0:30:60.58:0,61,962	0/0:32,0:32:96.31:0,96,1362	0/0:15,0:15:42.13:0,42,586	0/0:24,0:24:69.21:0,69,957	1/1:0,39:39:99:1426,117,0	0/0:38,0:38:99:0,108,1500	0/0:46,0:46:99:0,129,1821	0/0:20,0:20:54.16:0,54,741	0/0:36,0:36:99:0,102,1409	0/0:50,0:50:99:0,144,2033	0/0:39,0:39:99:0,114,1624	0/0:53,0:53:99:0,147,2055	0/0:35,0:35:93.31:0,93,1339	0/0:19,0:19:57.19:0,57,821	0/0:17,0:17:51.16:0,51,709	1/1:0,36:36:99:1289,108,0	1/1:0,20:20:60.19:740,60,0	1/1:0,34:34:84.26:1041,84,0	0/0:17,0:17:51.16:0,51,716	0/0:25,0:25:75.25:0,75,1077	0/0:24,0:24:66.19:0,66,912	0/0:28,0:28:84.27:0,84,1190	0/0:28,0:28:78.26:0,78,1122	1/1:1,27:28:63.20:781,63,0	1/1:0,9:9:27.08:335,27,0
chr10	42683405	.	AGT	A	8873.16	PASS	AC=20;AF=0.370;AN=54;BaseQRankSum=16.215;DP=745;FS=0.620;HRun=0;HaplotypeScore=88.4360;InbreedingCoeff=0.9989;MQ=76.39;MQ0=0;MQRankSum=-2.529;QD=30.70;ReadPosRankSum=4.834;VQSLOD=6.6845;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,43:50:99:1467,114,0	1/1:0,15:16:45.15:578,45,0	0/0:21,0:21:42.13:0,42,672	0/0:20,0:19:36.02:0,36,560	0/0:20,0:20:54.18:0,54,892	0/0:23,0:23:57.19:0,57,958	0/0:25,0:25:63.22:0,63,1063	0/0:24,0:24:58.08:0,58,961	0/0:22,0:22:57.19:0,57,942	0/0:35,0:35:93.31:0,93,1547	0/0:21,1:22:18.58:0,19,871	1/1:7,27:34:78.25:998,78,0	1/1:7,27:34:78.09:1004,78,0	1/1:5,24:29:66.21:849,66,0	0/0:35,0:35:96.33:0,96,1615	1/1:1,16:17:36.12:463,36,0	1/1:1,31:32:81.26:1042,81,0	0/0:21,0:21:57.20:0,57,962	0/0:23,0:23:54.18:0,54,886	0/0:27,0:27:72.25:0,72,1215	0/0:41,0:41:99:0,105,1746	1/1:3,23:26:66.21:849,66,0	1/1:3,20:23:57.19:733,57,0	1/1:2,26:28:69.22:888,69,0	0/0:21,0:21:60.21:0,60,1013	0/0:40,0:40:93.32:0,93,1565	0/0:34,0:34:87.30:0,87,1452	./.
chr10	42684286	.	AAAAG	A	9645.19	PASS	AB=0.615;AC=23;AF=0.411;AN=56;BaseQRankSum=16.681;DP=689;FS=6.162;HRun=0;HaplotypeScore=120.8200;InbreedingCoeff=0.9090;MQ=71.98;MQ0=2;MQRankSum=-1.186;QD=34.82;ReadPosRankSum=0.762;VQSLOD=4.8476;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:93.20:0,93,2139	0/0:10,0:10:27.05:0,27,555	0/0:30,0:22:39.10:0,39,834	0/0:31,0:25:15.76:0,16,662	0/0:26,0:26:51.17:0,51,1224	0/0:20,0:20:48.16:0,48,1153	0/0:16,0:16:42.14:0,42,981	1/1:4,21:25:63.18:973,63,0	0/0:36,0:36:90.27:0,90,1973	1/1:8,27:35:84.21:1333,84,0	1/1:2,22:24:66.01:975,66,0	0/0:34,0:34:90.29:0,90,2108	0/0:22,0:22:60.21:0,60,1465	0/0:25,0:25:63.20:0,63,1495	1/1:0,24:24:57.19:951,57,0	0/0:25,0:25:66.22:0,66,1522	0/0:24,0:24:63.18:0,63,1399	0/1:6,10:16:29.39:345,0,29	1/1:4,8:12:24.02:349,24,0	1/1:4,27:31:69.24:1152,69,0	1/1:4,15:19:36.12:596,36,0	0/0:26,0:26:66.22:0,66,1533	0/0:33,0:33:81.28:0,81,1966	0/0:20,0:20:54.19:0,54,1339	1/1:6,24:30:51.16:850,51,0	1/1:3,28:31:78.21:1212,78,0	1/1:4,22:26:47.82:810,48,0	1/1:0,4:4:6.02:101,6,0
chr10	42684705	.	AACACACACACACACAC	A	4569.03	PASS	AB=0.792;AC=11;AF=0.204;AN=54;BaseQRankSum=8.512;DP=650;FS=42.154;HRun=0;HaplotypeScore=284.5286;InbreedingCoeff=0.7702;MQ=56.41;MQ0=11;MQRankSum=-5.534;QD=34.61;ReadPosRankSum=-0.537;VQSLOD=2.6390;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:25:24.08:0,24,1481	0/0:9,0:11:15.52:0,16,573	./.	0/0:37,0:15:9.03:0,9,210	0/0:12,0:13:14.16:0,14,186	0/0:15,0:17:21.07:0,21,710	0/0:18,0:28:24.89:0,25,846	0/0:26,0:26:32.59:0,33,740	0/0:16,0:18:6.02:0,6,162	1/1:17,9:26:27.05:865,27,0	1/1:12,1:13:2.96:20,3,0	0/0:21,0:27:24.08:0,24,777	0/0:10,0:13:15.05:0,15,563	0/0:17,0:24:24.08:0,24,808	1/1:18,21:39:62.74:2147,63,0	0/0:26,0:34:48.12:0,48,2378	0/0:11,0:23:30.08:0,30,1752	0/1:14,5:19:99:381,0,187	0/0:18,0:17:7.89:0,8,131	0/0:19,0:25:30.02:0,30,779	0/0:28,0:28:27.09:0,27,925	0/0:16,0:24:27.09:0,27,889	0/0:14,0:15:12.04:0,12,521	0/0:20,0:33:30.10:0,30,1316	1/1:9,8:17:18.06:674,18,0	1/1:13,5:18:15.04:483,15,0	0/0:10,0:17:14.54:0,15,273	0/0:23,0:25:38.80:0,39,1078
chr10	42685018	.	TTCTCTCTC	T	1976.86	PASS	AB=0.816;AC=12;AF=0.222;AN=54;BaseQRankSum=2.018;DP=584;FS=19.780;HRun=0;HaplotypeScore=162.0554;InbreedingCoeff=0.7173;MQ=69.81;MQ0=11;MQRankSum=-7.814;QD=13.63;ReadPosRankSum=0.664;VQSLOD=1.6566;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:38.99:0,39,606	0/0:9,0:9:12.51:0,13,182	0/0:24,0:16:6.02:0,6,68	0/0:50,0:22:4.72:0,5,51	0/1:16,0:15:25.14:25,0,397	0/0:22,0:20:39.12:0,39,1061	0/0:21,0:25:38.61:0,39,1017	0/0:33,0:32:21.05:0,21,305	0/0:18,0:17:36.11:0,36,924	0/0:26,0:26:36.10:0,36,793	./.	1/1:10,13:24:18.06:415,18,0	1/1:10,9:19:15.05:351,15,0	1/1:11,22:33:33.01:830,33,0	0/0:19,0:19:17.86:0,18,404	0/0:22,0:22:33.11:0,33,908	0/0:23,0:23:39.10:0,39,632	0/0:20,0:20:26.98:0,27,572	0/0:15,0:15:24.08:0,24,580	0/0:17,0:17:12.50:0,12,271	0/0:18,0:17:18.06:0,18,433	0/1:5,6:12:4.60:175,0,5	1/1:7,5:12:6.02:121,6,0	1/1:12,17:29:9.03:229,9,0	0/0:19,0:19:24.54:0,25,383	0/0:20,0:19:33.10:0,33,876	0/0:16,0:16:30.09:0,30,766	0/0:18,0:17:19.31:0,19,508
chr10	42685053	.	TCG	T	2589.35	PASS	AB=0.955;AC=27;AF=0.482;AN=56;BaseQRankSum=4.935;DP=539;FS=0.989;HRun=0;HaplotypeScore=128.1469;InbreedingCoeff=0.3989;MQ=51.03;MQ0=10;MQRankSum=0.364;QD=8.35;ReadPosRankSum=-2.222;VQSLOD=3.1695;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:18,2:21:54.94:157,0,55	1/1:10,1:12:23.59:192,24,0	0/0:5,0:1:3:0,3,29	0/1:27,0:8:3.38:3,0,25	0/1:19,0:18:53.79:54,0,111	0/0:25,0:24:37.64:0,38,585	0/0:30,0:30:64.78:0,65,760	1/1:13,0:13:13.12:144,13,0	0/0:18,0:17:23.09:0,23,504	1/1:22,0:22:21.17:294,21,0	1/1:10,0:10:17.93:141,18,0	0/0:22,0:21:15.78:0,16,149	0/0:18,0:18:31.53:0,32,220	0/0:32,0:32:27.76:0,28,166	0/1:16,0:16:12.34:13,0,12	0/1:21,1:22:50.82:178,0,51	0/1:19,4:23:17.46:323,0,17	0/0:16,0:16:0.05:0,0,1	1/1:11,0:11:3.32:23,3,0	1/1:18,1:19:7.45:197,7,0	1/1:15,0:12:15.90:122,16,0	0/0:22,0:22:35.97:0,36,256	0/0:11,0:11:20.08:0,20,141	0/0:30,0:28:20.32:0,20,132	1/1:22,0:22:31.16:247,31,0	1/1:22,0:22:2.83:331,3,0	1/1:20,2:22:6.40:240,6,0	0/1:14,0:13:19.07:124,0,19
chr10	42685057	.	TCG	T	2414.93	PASS	AB=0.970;AC=23;AF=0.411;AN=56;BaseQRankSum=5.267;DP=536;FS=4.267;HRun=0;HaplotypeScore=130.7007;InbreedingCoeff=0.4441;MQ=52.27;MQ0=6;MQRankSum=0.965;QD=9.58;ReadPosRankSum=-0.723;VQSLOD=2.8774;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:19,2:21:71.95:156,0,72	1/1:10,0:10:23.87:194,24,0	0/0:4,0:1:3.01:0,3,58	0/0:29,0:13:14.64:0,15,294	0/0:21,0:20:18.83:0,19,171	0/0:21,0:21:51.08:0,51,899	0/0:32,0:32:90.22:0,90,1560	1/1:17,0:17:13.88:169,14,0	0/0:19,0:18:28.94:0,29,733	1/1:22,0:22:25.86:311,26,0	1/1:11,0:11:19.39:182,19,0	0/0:22,0:21:32.35:0,32,428	0/0:19,0:19:45.06:0,45,636	0/0:33,0:33:59.65:0,60,722	0/1:16,0:16:12.34:14,0,12	0/1:20,0:20:53.53:135,0,54	0/1:19,3:22:32.24:272,0,32	0/0:17,0:17:0.46:0,0,2	0/1:10,0:10:14.50:15,0,24	1/1:19,0:19:5.53:176,6,0	1/1:13,0:10:15.90:123,16,0	0/0:24,0:24:42.10:0,42,700	0/0:14,0:14:26.95:0,27,416	0/0:29,0:27:27.04:0,27,398	1/1:18,0:18:25.17:198,25,0	0/1:21,0:21:1.48:303,0,1	1/1:20,0:20:7.86:243,8,0	0/1:12,0:12:19.85:119,0,20
chr10	42685066	.	C	CTT	3638.29	PASS	AB=1.000;AC=26;AF=0.464;AN=56;BaseQRankSum=7.415;DP=488;FS=24.052;HRun=1;HaplotypeScore=119.1789;InbreedingCoeff=0.8947;MQ=56.43;MQ0=3;MQRankSum=-1.238;QD=17.66;ReadPosRankSum=-1.960;VQSLOD=-0.4697;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:39:0,39,496	0/0:10,0:10:27.09:0,27,392	0/1:7,0:4:2.87:3,0,44	0/1:19,0:14:0.19:0,0,310	0/0:16,0:16:20.98:0,21,235	0/0:21,0:21:54.11:0,54,800	0/0:30,0:30:87.23:0,87,1336	1/1:18,0:18:53.78:487,54,0	0/0:16,0:16:36.12:0,36,579	1/1:15,0:15:41.88:378,42,0	1/1:12,0:12:29.93:312,30,0	0/0:22,0:21:35.71:0,36,508	0/0:23,0:23:48.14:0,48,709	0/0:27,0:27:62.70:0,63,946	1/1:0,14:15:9.03:174,9,0	0/0:21,0:21:38.63:0,39,593	0/0:18,0:18:49.24:0,49,607	1/1:0,16:17:9.03:136,9,0	1/1:5,0:5:14.87:105,15,0	1/1:18,0:18:47.58:328,48,0	1/1:9,0:7:17.88:137,18,0	0/0:23,0:23:45.15:0,45,717	0/0:14,0:14:30.10:0,30,480	0/0:24,0:22:27.09:0,27,429	1/1:13,0:13:29.74:246,30,0	1/1:28,0:28:72.30:670,72,0	1/1:16,2:18:47.55:426,48,0	1/1:12,0:12:35.49:237,35,0
chr10	42685340	.	CAT	C	3469.22	PASS	AB=0.977;AC=31;AF=0.554;AN=56;BaseQRankSum=7.645;DP=481;FS=6.998;HRun=0;HaplotypeScore=118.1721;InbreedingCoeff=0.2512;MQ=57.90;MQ0=3;MQRankSum=-2.202;QD=10.51;ReadPosRankSum=4.939;VQSLOD=2.7206;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:17,22:39:57.14:700,57,0	1/1:3,6:9:20.10:237,20,0	0/0:11,0:8:21.05:0,21,280	0/1:7,0:6:0.12:0,0,88	0/0:27,0:27:51.08:0,51,683	0/0:28,0:28:75.24:0,75,1218	0/0:24,0:24:57.15:0,57,899	0/0:35,0:33:52.32:0,52,370	0/0:15,0:15:27.09:0,27,436	0/1:8,0:8:3.38:70,0,3	0/1:8,0:8:3.19:29,0,3	1/1:18,2:19:20.15:225,20,0	0/1:20,3:23:10.61:185,0,11	0/1:16,3:18:20.72:123,0,21	0/1:7,0:7:15.79:25,0,16	1/1:3,19:22:66.21:848,66,0	1/1:1,16:17:18.06:231,18,0	0/1:8,0:8:5.14:61,0,5	0/0:11,0:11:0.29:0,0,81	0/1:25,0:25:70.61:71,0,119	0/1:9,0:10:23.09:45,0,23	1/1:12,2:14:16.04:133,16,0	1/1:7,1:8:6.86:62,7,0	1/1:14,1:15:13.26:65,13,0	1/1:17,0:17:3.06:54,3,0	0/1:17,0:17:3.42:116,0,3	1/1:26,0:26:24.13:140,24,0	0/1:11,0:11:50.37:50,0,88
chr10	42685349	.	A	ATG	2076.33	PASS	AB=1.000;AC=20;AF=0.357;AN=56;BaseQRankSum=-0.014;DP=496;FS=28.276;HRun=0;HaplotypeScore=135.9848;InbreedingCoeff=0.4081;MQ=56.16;MQ0=5;MQRankSum=4.331;QD=8.41;ReadPosRankSum=0.886;VQSLOD=1.7336;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:35,0:35:25.37:25,0,179	0/0:12,0:12:25.53:0,26,135	0/0:12,0:9:23.96:0,24,284	0/0:9,0:4:8.75:0,9,92	0/0:26,0:26:51.64:0,52,774	0/0:29,0:29:84.21:0,84,1176	0/0:27,0:27:75.12:0,75,969	0/1:32,0:30:53.82:54,0,104	0/0:13,0:13:29.82:0,30,433	0/0:10,0:10:21.73:0,22,242	0/1:7,0:6:3.10:3,0,60	1/1:4,20:23:28.48:616,28,0	1/1:4,16:20:23.79:454,24,0	1/1:9,12:20:14.57:281,15,0	0/1:6,0:6:0.19:0,0,76	0/0:26,0:26:66.98:0,67,325	0/0:17,0:17:16.60:0,17,75	0/0:7,0:7:16.86:0,17,178	0/1:12,0:11:7.83:8,0,38	0/1:22,0:23:34.15:34,0,129	0/1:12,0:12:14:14,0,39	1/1:5,12:17:9.33:324,9,0	1/1:3,8:11:9.01:148,9,0	1/1:3,13:16:16.87:293,17,0	0/0:15,0:15:6.31:0,6,175	0/0:14,0:15:27.93:0,28,317	0/0:31,0:31:17.27:0,17,74	0/1:11,0:11:4.66:5,0,59
chr10	42685351	.	ATG	A	3911.08	PASS	AB=0.964;AC=32;AF=0.571;AN=56;BaseQRankSum=3.182;DP=524;FS=0.852;HRun=0;HaplotypeScore=135.6217;InbreedingCoeff=0.2029;MQ=54.31;MQ0=5;MQRankSum=-1.639;QD=9.85;ReadPosRankSum=4.418;VQSLOD=3.5724;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:34,0:34:14.92:275,15,0	0/1:15,0:15:23.57:95,0,24	0/0:11,0:8:15.37:0,15,172	0/1:9,0:4:1.71:2,0,46	0/0:29,0:29:50.65:0,51,548	0/0:30,0:30:84.09:0,84,1378	0/0:28,0:28:76.03:0,76,1118	1/1:30,2:30:35.80:219,36,0	0/0:13,0:13:29.68:0,30,437	0/1:10,1:11:30.94:222,0,31	0/1:6,0:6:3.08:78,0,3	0/1:24,0:23:12.07:12,0,76	0/1:20,0:20:37.75:38,0,58	0/1:23,0:22:18.01:18,0,103	1/1:8,0:11:2.39:102,2,0	1/1:26,0:26:53.42:413,53,0	1/1:17,0:17:17.75:118,18,0	0/1:8,0:8:4.21:167,0,4	1/1:10,2:11:14.28:100,14,0	1/1:9,13:22:42.16:456,42,0	1/1:6,7:13:23.96:287,24,0	0/1:17,0:17:21.61:22,0,27	0/1:11,0:11:7.78:8,0,29	0/0:16,0:16:14.89:0,15,77	1/1:12,1:21:8.84:199,9,0	0/1:9,0:22:66.63:323,0,67	1/1:2,29:31:53.77:569,54,0	0/1:5,6:11:0.87:189,0,1
chr10	42685355	.	ATATG	A	3702.57	PASS	AB=1.000;AC=31;AF=0.554;AN=56;BaseQRankSum=3.617;DP=514;FS=12.232;HRun=0;HaplotypeScore=148.1076;InbreedingCoeff=0.2663;MQ=53.69;MQ0=7;MQRankSum=-2.936;QD=9.69;ReadPosRankSum=2.935;VQSLOD=2.5908;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:34,0:34:7.33:335,7,0	1/1:15,0:15:20.16:226,20,0	0/0:10,0:6:17.81:0,18,168	0/1:9,0:4:0.77:1,0,43	0/1:29,0:29:31.78:32,0,164	0/0:30,0:30:87.15:0,87,1873	0/0:26,0:26:72.15:0,72,1578	1/1:24,3:25:31.43:292,31,0	0/0:16,0:16:33.51:0,34,634	0/1:10,0:10:60.50:61,0,76	0/1:7,0:6:14.80:29,0,15	0/0:24,0:23:38.54:0,39,485	0/1:18,0:18:14.72:15,0,307	0/1:24,0:23:11.82:12,0,244	0/1:10,0:10:24.51:25,0,54	1/1:26,0:26:24.79:523,25,0	1/1:17,0:17:6.55:119,7,0	0/1:8,0:8:55.97:58,0,56	1/1:12,1:11:14.04:177,14,0	1/1:19,2:21:41.70:588,42,0	1/1:12,1:13:12.16:292,12,0	0/1:17,0:17:0.66:1,0,224	0/0:11,0:11:12.44:0,12,126	0/0:15,0:15:19.40:0,19,240	0/1:19,0:19:39.69:40,0,48	0/1:18,0:18:4.88:5,0,156	1/1:32,0:32:46.16:641,46,0	1/1:14,0:14:18.49:234,18,0
chr10	42685357	.	ATGTG	A	2957.40	PASS	AB=1.000;AC=20;AF=0.357;AN=56;BaseQRankSum=2.975;DP=516;FS=15.176;HRun=0;HaplotypeScore=153.2714;InbreedingCoeff=0.7537;MQ=53.28;MQ0=8;MQRankSum=-3.110;QD=12.43;ReadPosRankSum=3.822;VQSLOD=2.4841;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:16,17:34:39.13:617,39,0	1/1:3,12:15:27.05:417,27,0	0/0:10,0:6:5.99:0,6,83	0/0:11,0:4:3.01:0,3,58	1/1:6,0:30:21.50:197,21,0	0/0:29,0:30:65.96:0,66,1500	0/0:25,0:25:54.19:0,54,1316	0/1:27,0:25:2.38:137,0,2	0/0:13,0:15:30.29:0,30,602	0/0:11,0:11:12.04:0,12,187	0/0:8,0:7:2.99:0,3,24	0/0:25,0:24:42.14:0,42,827	0/0:20,0:20:33.10:0,33,609	0/0:24,0:23:27.07:0,27,477	0/0:10,0:10:8.95:0,9,108	1/1:5,21:26:57.16:904,57,0	1/1:9,5:14:12.04:197,12,0	0/0:8,0:8:6.02:0,6,111	0/1:13,0:11:13.63:46,0,14	1/1:22,0:22:42.63:262,43,0	1/1:13,0:13:5.15:91,5,0	0/0:17,0:17:21.07:0,21,411	0/0:11,0:11:15.04:0,15,233	0/0:16,0:16:27.07:0,27,480	0/0:19,0:19:11.99:0,12,119	0/0:18,0:18:39.51:0,40,442	1/1:31,0:31:33.90:217,34,0	1/1:13,0:13:16.74:76,17,0
chr10	42685467	.	C	CTT	5671.16	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-3.178;DP=548;FS=17.361;HRun=9;HaplotypeScore=97.9793;InbreedingCoeff=0.9706;MQ=78.08;MQ0=1;MQRankSum=-0.451;QD=23.43;ReadPosRankSum=0.722;VQSLOD=2.6722;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:78.63:0,79,831	0/0:12,0:12:36.08:0,36,375	0/0:14,0:14:23.70:0,24,205	0/0:14,0:13:29.41:0,29,286	0/0:30,0:30:78.18:0,78,829	0/0:30,0:30:90.21:0,90,949	0/0:16,0:16:39.05:0,39,405	0/0:26,0:26:62.73:0,63,349	0/0:19,1:20:4.92:0,5,464	1/1:5,16:21:48.15:718,48,0	1/1:2,13:16:43.58:555,44,0	1/1:3,0:19:41.92:356,42,0	1/1:7,0:20:37.21:308,37,0	1/1:2,0:24:48.49:478,48,0	1/1:4,6:13:17.85:219,18,0	0/0:21,0:20:50.69:0,51,537	0/0:21,0:21:56.95:0,57,568	1/1:3,16:20:45.15:685,45,0	0/0:13,0:13:31.17:0,31,187	0/0:24,0:24:57.53:0,58,311	0/0:10,0:10:24.37:0,24,107	1/1:4,0:24:42.91:427,43,0	1/1:6,0:22:38.91:323,39,0	1/1:3,0:29:66.37:565,66,0	1/1:1,13:15:21.07:306,21,0	1/1:2,16:18:48.16:732,48,0	0/0:19,0:19:40.04:0,40,190	0/0:3,0:3:8.39:0,8,40
chr10	42685476	.	T	TA	3656.82	PASS	AB=1.000;AC=25;AF=0.446;AN=56;BaseQRankSum=0.974;DP=570;FS=4.133;HRun=5;HaplotypeScore=95.8190;InbreedingCoeff=0.5142;MQ=81.67;MQ0=1;MQRankSum=-1.195;QD=10.95;ReadPosRankSum=1.092;VQSLOD=1.3519;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:29:11.38:11,0,68	0/1:14,0:14:7.49:18,0,7	0/0:18,0:18:30.76:0,31,264	0/0:16,0:15:35.90:0,36,331	0/0:29,0:29:87.13:0,87,899	0/0:32,0:32:93.16:0,93,958	0/0:17,0:17:48.09:0,48,487	1/1:3,27:30:81.16:930,81,0	0/0:21,0:21:56.90:0,57,558	0/0:21,0:21:60.64:0,61,385	0/0:15,0:15:23.66:0,24,147	1/1:17,0:17:26.36:79,26,0	0/1:20,0:20:32.78:33,0,34	0/1:26,0:26:2.84:78,0,3	0/0:11,0:11:15.80:0,16,117	1/1:24,0:23:6.67:136,7,0	0/1:23,0:23:14.11:69,0,14	0/0:19,0:19:43.46:0,43,210	1/1:5,9:14:33.98:398,34,0	1/1:4,24:28:62.98:710,63,0	1/1:1,10:11:27.09:344,27,0	0/1:25,0:25:46.59:47,0,57	0/1:21,0:21:26.55:42,0,27	1/1:28,0:28:17.25:96,17,0	0/0:15,0:15:25.64:0,26,137	0/0:22,0:21:50.10:0,50,281	1/1:2,19:21:45.04:551,45,0	1/1:0,3:3:9.03:114,9,0
chr10	42686851	.	C	CAT	28297.55	PASS	AB=0.533;AC=43;AF=0.768;AN=56;BaseQRankSum=1.253;DP=721;FS=2.078;HRun=0;HaplotypeScore=111.5077;InbreedingCoeff=0.9225;MQ=81.21;MQ0=0;MQRankSum=-3.260;QD=48.87;ReadPosRankSum=0.926;VQSLOD=5.7182;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,25:26:72.25:1344,72,0	1/1:0,16:16:39.13:730,39,0	0/0:13,0:14:33.05:0,33,395	0/0:23,0:23:47.16:0,47,594	0/0:31,0:31:84.27:0,84,1216	0/0:28,0:28:81.24:0,81,1153	0/0:19,0:19:51.17:0,51,750	1/1:1,33:35:99:1780,102,0	0/0:27,0:27:78.20:0,78,1068	1/1:0,29:29:87.30:1613,87,0	1/1:3,24:27:66.22:1198,66,0	1/1:2,17:20:45.15:842,45,0	1/1:0,33:33:90.31:1685,90,0	1/1:1,26:27:63.22:1179,63,0	1/1:1,35:36:96.33:1791,96,0	1/1:2,36:39:99:1854,99,0	1/1:1,18:19:45.15:843,45,0	1/1:2,12:14:30.10:560,30,0	1/1:1,23:26:72.23:1277,72,0	1/1:2,33:35:99:1854,99,0	1/1:0,27:28:75.26:1404,75,0	1/1:1,27:30:75.26:1404,75,0	1/1:1,25:28:72.21:1347,72,0	0/1:2,13:16:5.03:635,0,5	1/1:2,20:24:60.20:1093,60,0	1/1:1,27:28:81.28:1504,81,0	1/1:0,32:32:93.32:1740,93,0	1/1:0,11:11:33.11:618,33,0
chr10	42687694	.	TC	T	5131.45	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=13.280;DP=704;FS=1.125;HRun=3;HaplotypeScore=68.1820;InbreedingCoeff=0.9996;MQ=83.29;MQ0=0;MQRankSum=-1.235;QD=32.27;ReadPosRankSum=3.576;VQSLOD=5.1665;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:96.24:0,96,1333	0/0:9,0:9:27.09:0,27,383	0/0:23,0:23:66.11:0,66,911	0/0:22,0:22:60.20:0,60,862	0/0:30,0:30:87.29:0,87,1248	0/0:30,0:30:87.29:0,87,1253	0/0:36,0:36:99:0,102,1449	0/0:31,0:31:84.26:0,84,1162	0/0:19,0:19:57.19:0,57,811	0/0:38,0:38:99:0,111,1579	0/0:17,0:17:45.14:0,45,629	1/1:1,22:23:60.19:744,60,0	1/1:0,25:24:72.23:892,72,0	1/1:1,34:35:93.29:1153,93,0	0/0:26,0:26:72.23:0,72,1018	0/0:34,0:34:99:0,102,1469	0/0:13,0:13:39.10:0,39,540	0/0:10,0:10:30.10:0,30,432	0/0:20,0:20:54.17:0,54,759	0/0:25,0:25:72.23:0,72,1017	0/0:35,0:35:99:0,105,1492	1/1:1,20:21:54.17:670,54,0	1/1:0,33:33:90.28:1115,90,0	1/1:0,22:22:45.14:558,45,0	0/0:18,0:18:51.16:0,51,717	0/0:42,0:42:99:0,126,1815	0/0:23,0:23:69.22:0,69,975	0/0:11,0:11:33.11:0,33,468
chr10	42687893	.	TTTC	T	5026.06	PASS	AB=1.000;AC=39;AF=0.696;AN=56;BaseQRankSum=2.069;DP=643;FS=3.019;HRun=0;HaplotypeScore=124.7171;InbreedingCoeff=0.5578;MQ=67.50;MQ0=5;MQRankSum=-0.922;QD=10.28;ReadPosRankSum=-3.574;VQSLOD=3.8314;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:51,0:51:40.03:40,0,538	0/1:6,0:6:23.77:59,0,24	0/0:29,0:14:16.01:0,16,229	0/1:29,0:19:8.78:9,0,169	0/0:20,0:20:60.17:0,60,1091	0/0:23,0:23:66.18:0,66,1184	0/0:16,0:16:37.88:0,38,592	1/1:39,2:40:67.96:528,68,0	0/0:28,0:28:84.22:0,84,1381	1/1:21,0:20:56.63:375,57,0	1/1:28,1:28:54.66:381,55,0	1/1:14,2:16:26.64:229,27,0	1/1:28,0:28:29.15:180,29,0	1/1:16,2:18:30.75:236,31,0	1/1:27,0:26:52.90:319,53,0	0/1:30,0:30:66.37:66,0,319	0/0:38,0:38:32.55:0,33,636	0/1:21,0:21:12.55:226,0,13	1/1:13,2:15:31.44:258,31,0	1/1:20,3:23:55.38:462,55,0	1/1:8,0:7:2.94:18,3,0	1/1:17,2:19:33.27:305,33,0	1/1:19,0:19:27.52:165,28,0	1/1:15,3:18:18.16:139,18,0	1/1:18,0:18:23.99:143,24,0	1/1:28,1:29:79.44:585,79,0	1/1:17,1:18:30.29:216,30,0	1/1:3,1:4:8.89:86,9,0
chr10	42687894	.	TTC	T	9549.49	PASS	AB=1.000;AC=42;AF=0.750;AN=56;BaseQRankSum=-0.097;DP=647;FS=1.138;HRun=0;HaplotypeScore=99.1956;InbreedingCoeff=0.6114;MQ=67.46;MQ0=5;MQRankSum=-1.107;QD=18.02;ReadPosRankSum=-4.373;VQSLOD=3.9942;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:52,0:52:99:269,0,125	1/1:7,0:7:7.64:104,8,0	0/0:29,0:14:18.88:0,19,202	0/1:30,0:19:13.79:14,0,148	0/0:20,0:20:59.97:0,60,875	0/0:23,0:23:66.17:0,66,969	0/0:16,0:16:19.97:0,20,443	1/1:29,12:40:84.87:845,85,0	0/0:29,0:29:60.50:0,60,1123	1/1:1,20:20:59.94:751,60,0	1/1:2,27:28:62.61:646,63,0	1/1:2,14:16:27.04:355,27,0	1/1:2,26:28:29.77:430,30,0	1/1:2,16:18:33.04:436,33,0	1/1:0,27:26:54.18:821,54,0	0/1:30,0:30:73.41:191,0,73	0/1:38,0:38:3.08:3,0,220	1/1:16,5:21:31.33:452,31,0	1/1:13,3:16:37.56:380,38,0	1/1:18,5:23:59.95:610,60,0	1/1:0,8:7:3.01:46,3,0	1/1:13,7:20:55.28:633,55,0	1/1:1,18:19:29.89:405,30,0	1/1:6,11:17:20.93:273,21,0	1/1:1,17:18:26.96:381,27,0	1/1:3,26:29:82.96:927,83,0	1/1:6,12:18:38.65:457,39,0	1/1:1,3:4:9.03:121,9,0
chr10	42687895	.	TC	T	8372.98	PASS	AB=0.969;AC=46;AF=0.821;AN=56;BaseQRankSum=6.481;DP=642;FS=9.550;HRun=1;HaplotypeScore=94.2218;InbreedingCoeff=0.7666;MQ=67.55;MQ0=5;MQRankSum=-0.355;QD=15.45;ReadPosRankSum=-2.621;VQSLOD=3.2687;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:48,5:53:99:774,107,0	1/1:6,1:7:19.79:170,20,0	0/0:27,1:14:16.34:0,16,156	0/1:30,0:19:9.50:10,0,132	0/0:20,0:20:56.92:0,57,660	0/0:23,0:23:69.17:0,69,806	0/1:14,1:15:2.79:3,0,324	1/1:38,3:40:72.71:711,73,0	0/0:29,0:29:60.42:0,60,912	1/1:20,1:20:59.96:530,60,0	1/1:28,1:28:62.54:492,63,0	1/1:16,0:16:26.96:228,27,0	1/1:26,0:26:29.81:258,30,0	1/1:18,0:18:32.90:271,33,0	1/1:27,0:26:53.99:475,54,0	1/1:27,3:30:68.37:543,68,0	1/1:38,0:38:50.50:266,51,0	1/1:15,6:21:52.70:488,53,0	1/1:16,0:16:31.53:271,32,0	1/1:21,2:23:59.88:503,60,0	1/1:8,0:7:3:26,3,0	1/1:20,0:20:56.94:495,57,0	1/1:18,1:19:29.91:251,30,0	1/1:14,3:17:21:197,21,0	1/1:17,1:18:27.01:253,27,0	1/1:27,2:29:83.12:705,83,0	1/1:13,3:16:38.99:376,39,0	1/1:4,0:4:8.99:77,9,0
chr10	42688686	.	CAAA	C	4985.07	PASS	AB=0.657;AC=32;AF=0.571;AN=56;BaseQRankSum=-5.301;DP=569;FS=0.000;HRun=15;HaplotypeScore=106.0766;InbreedingCoeff=0.3483;MQ=75.49;MQ0=1;MQRankSum=-2.896;QD=11.25;ReadPosRankSum=3.568;VQSLOD=2.2535;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:11,4:36:99:110,0,173	0/0:2,0:9:13.47:0,13,82	0/0:19,0:19:20.98:0,21,249	0/1:16,0:14:0.51:1,0,124	0/0:7,0:23:51.17:0,51,719	0/1:10,1:12:6.56:7,0,354	0/0:18,0:23:57.11:0,57,858	1/1:11,17:28:31.39:514,31,0	0/0:18,0:22:66.18:0,66,1026	1/1:11,17:29:47.76:519,48,0	1/1:3,9:13:22.43:266,22,0	0/1:9,1:25:7.47:7,0,138	0/1:7,2:23:12.38:47,0,12	0/1:4,2:18:29.63:75,0,30	1/1:5,22:29:24.32:449,24,0	0/0:6,0:15:18.21:0,18,126	0/1:8,3:30:62.52:63,0,95	0/1:4,14:20:1.89:350,0,2	1/1:6,11:19:37.39:404,37,0	1/1:2,9:13:29.74:288,30,0	1/1:1,15:18:44.81:472,45,0	0/1:6,1:17:26.18:50,0,26	0/0:7,0:14:9.22:0,9,37	0/1:6,1:29:21.65:39,0,22	1/1:5,12:19:19.32:338,19,0	1/1:7,12:20:32.81:354,33,0	1/1:5,16:22:39.65:451,40,0	1/1:0,5:7:16.47:183,16,0
chr10	42689005	.	GGTGTGTGTGTGTGTGTGTGT	G	1508.36	PASS	AB=1.000;AC=10;AF=0.192;AN=52;BaseQRankSum=3.813;DP=528;FS=5.397;HRun=0;HaplotypeScore=267.1946;InbreedingCoeff=0.6692;MQ=61.83;MQ0=14;MQRankSum=-1.583;QD=11.97;ReadPosRankSum=0.138;VQSLOD=1.9679;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:26:30.10:0,30,1426	0/0:7,0:8:15.05:0,15,436	0/1:34,0:27:9.17:9,0,976	0/1:21,0:12:2.15:2,0,489	0/0:22,0:21:15.05:0,15,679	0/0:21,0:21:36.12:0,36,2763	0/0:32,0:31:47.40:0,47,3698	0/0:29,0:29:42.12:0,42,1891	0/0:15,0:15:21.07:0,21,1596	0/0:20,0:21:48.16:0,48,2412	0/0:12,0:11:6.49:0,6,347	1/1:11,1:17:18.06:473,18,0	1/1:10,3:16:18.06:723,18,0	1/1:7,9:24:9.03:411,9,0	0/0:23,0:21:33.11:0,33,1769	0/0:14,0:13:24.08:0,24,1420	0/0:15,0:15:36.12:0,36,2128	0/0:17,0:17:39.13:0,39,1917	0/0:22,0:20:21.07:0,21,1016	0/0:17,0:17:15.52:0,16,892	0/0:10,0:8:9.03:0,9,610	./.	./.	1/1:9,4:14:2.92:36,3,0	0/0:19,0:18:33.11:0,33,1753	0/0:26,0:24:51.18:0,51,2953	0/0:26,0:24:42.13:0,42,2743	0/0:4,0:4:6.02:0,6,374
chr10	42689043	.	T	TGAGAGAGA	3036.52	PASS	AB=0.997;AC=28;AF=0.519;AN=54;BaseQRankSum=8.780;DP=501;FS=41.445;HRun=0;HaplotypeScore=168.6888;InbreedingCoeff=-0.1133;MQ=43.24;MQ0=18;MQRankSum=1.532;QD=8.27;ReadPosRankSum=-1.507;VQSLOD=1.0984;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:23:6.24:6,0,54	0/1:5,0:5:2.35:120,0,2	./.	0/0:10,0:2:0.89:0,1,2	0/0:16,6:23:4.69:0,5,13	0/0:25,0:25:60.14:0,60,1255	0/0:42,0:41:64.91:0,65,1619	0/1:17,0:16:57.89:58,0,479	0/0:14,0:14:33.11:0,33,794	0/1:23,0:23:99:452,0,139	1/1:14,0:13:9.46:127,9,0	0/1:12,0:10:8.67:49,0,9	1/1:20,0:17:12.71:179,13,0	1/1:36,0:33:25.95:316,26,0	0/1:22,0:21:73.09:329,0,73	1/1:16,0:13:3.98:151,4,0	0/1:15,0:15:32.63:33,0,250	0/1:20,0:20:53.43:388,0,53	0/1:10,0:8:58.37:58,0,127	0/1:14,0:14:46.01:46,0,155	0/0:9,0:7:5.64:0,6,92	1/1:14,0:13:4.56:37,5,0	1/1:11,0:11:9.41:95,9,0	1/1:23,0:21:3.93:179,4,0	0/1:19,0:16:5.75:97,0,6	0/1:28,0:26:99:290,0,347	0/1:20,0:19:99:141,0,447	0/1:4,0:2:14.96:48,0,15
chr10	42689045	.	T	TGAGAGA	4510.87	PASS	AB=0.981;AC=32;AF=0.593;AN=54;BaseQRankSum=6.242;DP=504;FS=38.028;HRun=0;HaplotypeScore=158.0908;InbreedingCoeff=0.0399;MQ=44.53;MQ0=18;MQRankSum=3.837;QD=11.39;ReadPosRankSum=0.261;VQSLOD=2.7174;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:26:3.64:12,4,0	1/1:6,0:6:0.97:89,1,0	./.	0/0:13,0:5:3.37:0,3,17	0/1:23,0:21:1.09:32,0,1	0/0:25,0:25:58.71:0,59,1021	0/0:40,0:39:67.54:0,68,1115	0/1:18,0:17:99:170,0,202	0/0:15,0:15:33.41:0,33,497	0/1:22,0:22:73.84:431,0,74	1/1:14,0:13:11.34:217,11,0	1/1:13,0:11:7.97:76,8,0	1/1:20,0:17:13.93:279,14,0	1/1:36,0:33:25.33:533,25,0	0/1:22,0:21:1.29:456,0,1	0/1:18,0:15:5.61:132,0,6	0/1:13,0:13:6.11:63,0,6	0/1:20,0:20:23.67:453,0,24	0/1:10,0:8:68.82:71,0,69	0/1:10,4:14:44.67:45,0,90	0/0:7,0:5:5.86:0,6,57	1/1:14,0:13:6.02:98,6,0	1/1:11,0:11:15.04:261,15,0	1/1:24,0:22:14.40:284,14,0	0/1:20,0:17:4.24:116,0,4	0/1:28,0:26:99:449,0,172	0/1:19,0:17:99:129,0,218	1/1:5,0:3:6.02:116,6,0
chr10	42689715	.	A	ACATGAGTC	41554.03	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-9.936;DP=642;FS=33.447;HRun=0;HaplotypeScore=126.3665;InbreedingCoeff=0.9923;MQ=67.14;MQ0=0;MQRankSum=-14.027;QD=82.78;ReadPosRankSum=2.159;VQSLOD=3.0328;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,16:26:32.36:1318,32,0	1/1:4,12:18:42.14:1854,42,0	0/0:25,0:25:72.25:0,72,1990	0/0:27,0:27:72.25:0,72,1914	0/0:23,0:22:57.19:0,57,1441	0/0:20,0:20:57.17:0,57,1572	0/0:24,0:24:57.20:0,57,1573	1/1:7,22:34:93.32:3358,93,0	0/0:21,0:21:60.21:0,60,1645	1/1:5,12:20:54.07:2156,54,0	1/1:1,12:13:27.09:1161,27,0	1/1:5,28:42:66.23:2924,66,0	1/1:4,23:29:81.28:3508,81,0	1/1:4,23:31:57.20:2538,57,0	1/1:5,23:30:54.19:2397,54,0	1/1:3,14:19:42.14:1793,42,0	1/1:6,20:28:48.16:2138,48,0	1/1:3,18:24:42.14:1771,42,0	1/1:5,11:20:54.18:1874,54,0	1/1:4,12:18:33.07:1340,33,0	1/1:10,12:30:36.12:1508,36,0	1/1:2,5:8:15.05:651,15,0	1/1:6,10:17:30.10:1284,30,0	1/1:3,10:20:15.05:652,15,0	1/1:3,17:22:51.18:2253,51,0	1/1:2,20:26:69.24:2735,69,0	1/1:1,16:18:36.12:1510,36,0	1/1:2,5:7:21.07:829,21,0
chr10	42689869	.	AGAAGGAAG	A	1289.40	PASS	AB=0.954;AC=12;AF=0.231;AN=52;BaseQRankSum=0.154;DP=532;FS=14.230;HRun=0;HaplotypeScore=137.6129;InbreedingCoeff=0.1272;MQ=65.30;MQ0=7;MQRankSum=-3.180;QD=5.91;ReadPosRankSum=-1.429;VQSLOD=1.7987;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:38:2.82:0,3,19	./.	./.	0/1:24,0:18:0:0,0,0	0/0:24,0:23:18.06:0,18,332	0/0:11,0:23:20.95:0,21,169	0/0:21,0:21:2.37:0,2,8	0/0:27,0:26:5.63:0,6,30	0/1:12,12:24:0.26:333,0,0	0/0:20,0:20:21:0,21,187	0/0:22,0:21:17.95:0,18,272	0/1:28,0:28:63.91:196,0,64	0/1:31,0:31:51.84:165,0,52	0/1:18,0:18:17.98:32,0,18	0/0:23,0:23:21.05:0,21,412	0/1:11,0:11:42.14:53,0,42	1/1:25,0:25:3.01:53,3,0	0/0:9,0:9:5.97:0,6,45	0/0:9,0:8:8.95:0,9,67	0/0:11,0:11:11.33:0,11,75	0/0:17,0:16:18.57:0,19,128	0/1:14,0:14:25.94:226,0,26	1/1:18,0:18:11.17:116,11,0	0/1:24,0:24:11.84:254,0,12	0/0:13,0:13:12.03:0,12,284	0/0:17,0:16:15:0,15,298	0/0:7,0:6:11.91:0,12,108	0/0:5,0:5:1.62:0,2,12
chr10	42689913	.	GGAAGGAAGGAAA	G	2984.63	PASS	AB=0.998;AC=29;AF=0.518;AN=56;BaseQRankSum=1.276;DP=515;FS=1.927;HRun=0;HaplotypeScore=157.1953;InbreedingCoeff=-0.1222;MQ=53.80;MQ0=22;MQRankSum=2.764;QD=7.42;ReadPosRankSum=-5.434;VQSLOD=0.8961;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:7,22:28:5.13:74,5,0	1/1:4,0:4:8.95:68,9,0	0/0:5,0:2:6.01:0,6,58	0/0:7,0:6:8.28:0,8,104	0/0:34,0:32:89.55:0,90,1198	0/0:26,0:26:57.03:0,57,785	0/0:21,0:20:56.44:0,56,764	1/1:18,0:11:19.77:163,20,0	0/0:20,0:20:4.63:0,5,284	0/1:21,0:20:99:189,0,134	0/1:17,0:16:60.58:61,0,270	0/1:28,1:29:67.87:78,0,68	0/1:27,0:27:4.03:4,0,41	1/1:3,21:24:4.79:96,5,0	0/1:17,0:16:99:133,0,431	1/1:19,0:18:47.49:531,47,0	1/1:19,0:19:1.82:5,2,0	0/1:9,0:9:5.13:104,0,5	0/1:10,0:7:36.18:52,0,36	0/1:20,0:15:83.21:99,0,83	0/1:17,0:16:82.24:82,0,117	1/1:22,0:22:39.45:424,39,0	0/1:12,0:12:56.87:115,0,57	0/1:29,0:29:3.73:333,0,4	0/1:21,0:21:99:162,0,273	0/1:21,0:19:99:252,0,353	0/1:10,0:9:74.53:75,0,115	0/1:6,0:6:23.92:55,0,24
chr10	42689917	.	GGAAGGAAA	G	5442.61	PASS	AB=1.000;AC=40;AF=0.714;AN=56;BaseQRankSum=2.653;DP=533;FS=0.000;HRun=0;HaplotypeScore=127.7532;InbreedingCoeff=0.3830;MQ=54.02;MQ0=21;MQRankSum=-1.571;QD=12.81;ReadPosRankSum=-2.567;VQSLOD=3.3695;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:26:5.88:36,6,0	1/1:4,0:4:8.95:68,9,0	0/0:8,0:3:8.93:0,9,75	0/0:9,0:6:8.28:0,8,104	0/0:41,0:39:99:0,110,1011	0/0:27,0:27:61.27:0,61,578	0/0:23,0:22:47:0,47,625	1/1:16,0:10:24.11:149,24,0	0/1:19,0:19:99:204,0,144	1/1:22,0:21:30.70:280,31,0	0/1:15,0:14:71.88:72,0,121	1/1:5,25:30:15.05:317,15,0	1/1:4,22:26:11.82:253,12,0	1/1:23,0:23:5.71:131,6,0	0/1:17,0:16:99:136,0,210	1/1:20,0:19:50.26:435,50,0	1/1:0,18:18:3.01:73,3,0	1/1:11,0:11:17.40:147,17,0	1/1:9,0:7:9.85:91,10,0	1/1:21,0:16:25.33:166,25,0	1/1:17,0:15:10.12:164,10,0	1/1:22,0:22:52.13:665,52,0	1/1:12,2:14:35.96:443,36,0	1/1:28,1:29:68.79:845,69,0	0/1:23,0:23:99:169,0,150	0/1:24,0:22:99:341,0,159	0/1:12,0:11:6.56:138,0,7	1/1:6,0:6:16.73:119,17,0
chr10	42689921	.	GGAAA	G	5468.47	PASS	AB=1.000;AC=45;AF=0.804;AN=56;BaseQRankSum=7.384;DP=541;FS=4.826;HRun=0;HaplotypeScore=101.5744;InbreedingCoeff=0.5507;MQ=54.20;MQ0=20;MQRankSum=-2.910;QD=12.02;ReadPosRankSum=-0.753;VQSLOD=3.6507;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:26:5.86:36,6,0	1/1:4,0:4:11.55:77,12,0	0/0:9,0:3:8.93:0,9,75	0/0:11,0:8:14.19:0,14,150	0/0:42,0:40:91.40:0,91,825	0/1:28,0:28:53.05:53,0,345	0/0:24,0:23:47.43:0,47,540	1/1:14,0:8:21.64:141,22,0	0/1:21,0:21:49.13:49,0,191	1/1:22,0:21:56.88:583,57,0	1/1:15,0:14:24.59:140,25,0	1/1:30,0:30:14.95:130,15,0	1/1:26,0:26:11.92:99,12,0	1/1:22,0:22:5.91:63,6,0	0/1:19,0:17:14.18:166,0,14	1/1:21,0:20:56.25:459,56,0	1/1:18,0:18:3:28,3,0	1/1:11,0:11:18.44:149,18,0	1/1:7,1:6:17.96:188,18,0	1/1:4,16:16:38.47:279,38,0	1/1:17,0:15:40.95:362,41,0	1/1:22,0:22:55.11:534,55,0	1/1:14,0:14:37.85:312,38,0	1/1:29,0:29:69.12:596,69,0	1/1:23,0:23:7.81:195,8,0	1/1:26,0:24:35.53:451,36,0	1/1:11,1:11:26.87:220,27,0	1/1:6,0:6:17.91:157,18,0
chr10	42689930	.	G	GAAGA	2501.99	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=1.837;DP=567;FS=0.921;HRun=0;HaplotypeScore=127.5142;InbreedingCoeff=0.9092;MQ=57.21;MQ0=14;MQRankSum=-0.875;QD=20.68;ReadPosRankSum=-2.123;VQSLOD=3.2423;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:2.97:0,3,35	0/0:4,0:4:11.44:0,11,82	0/0:15,0:4:8.77:0,9,140	0/0:17,0:12:11.15:0,11,352	0/0:45,0:44:93.78:0,94,1723	0/0:27,0:27:63.22:0,63,1186	0/0:26,0:25:75.23:0,75,1327	0/0:15,0:12:26.67:0,27,178	0/0:22,0:22:45.14:0,45,785	1/1:26,0:25:57.76:575,58,0	1/1:14,2:15:31.06:331,31,0	0/0:30,0:30:20.81:0,21,180	0/0:26,0:25:17.88:0,18,199	0/0:25,0:25:14.91:0,15,117	1/1:19,1:19:38.96:461,39,0	0/0:20,0:19:56.89:0,57,491	0/0:19,0:19:6.02:0,6,77	1/1:8,0:8:17.98:152,18,0	0/0:9,0:7:17.71:0,18,129	0/0:20,0:17:28.50:0,28,243	0/0:18,0:16:29.95:0,30,214	0/0:20,0:20:43.77:0,44,398	0/0:14,0:14:35.92:0,36,325	0/0:31,0:31:64.48:0,64,503	1/1:24,1:25:39.66:439,40,0	1/1:25,1:25:71.92:730,72,0	0/0:12,0:11:29.74:0,30,222	0/0:7,0:7:18.33:0,18,155
chr10	42689977	.	GAAGAAAAGAA	G	4672.67	PASS	AB=1.000;AC=28;AF=0.500;AN=56;BaseQRankSum=1.608;DP=666;FS=10.662;HRun=0;HaplotypeScore=206.7750;InbreedingCoeff=0.6804;MQ=58.45;MQ0=12;MQRankSum=1.293;QD=15.47;ReadPosRankSum=-0.470;VQSLOD=2.1656;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:72.20:0,72,2803	0/1:9,0:9:4.22:4,0,81	0/0:42,0:17:5.40:0,5,49	0/0:82,0:29:4.18:0,4,100	0/1:37,0:36:9.73:10,0,122	0/0:28,0:28:63.21:0,63,2177	0/0:14,0:14:27.02:0,27,757	1/1:22,0:16:15.02:140,15,0	0/0:18,0:18:39.11:0,39,1484	1/1:7,18:24:44.98:606,45,0	1/1:3,10:13:14.71:105,15,0	0/0:30,0:30:27.09:0,27,824	0/0:22,0:22:18.35:0,18,883	0/0:30,0:30:32.88:0,33,835	1/1:5,15:20:9.03:273,9,0	0/1:22,0:22:26.62:27,0,81	0/1:15,0:15:17.11:44,0,17	1/1:9,0:9:17.07:216,17,0	1/1:16,1:15:15.05:301,15,0	1/1:12,0:12:14.98:203,15,0	1/1:14,2:16:27.05:366,27,0	0/0:17,0:17:18.47:0,18,336	0/0:21,0:21:32.98:0,33,671	0/0:23,0:22:28.72:0,29,386	1/1:10,17:26:12.04:224,12,0	1/1:8,25:33:77.82:1176,78,0	1/1:13,4:16:39.05:733,39,0	1/1:7,1:8:17.83:245,18,0
chr10	42690000	.	GAAA	G	363.75	PASS	AB=0.932;AC=7;AF=0.125;AN=56;BaseQRankSum=4.149;DP=641;FS=1.210;HRun=4;HaplotypeScore=151.0290;InbreedingCoeff=0.0076;MQ=50.59;MQ0=16;MQRankSum=-2.886;QD=3.16;ReadPosRankSum=4.476;VQSLOD=-0.0475;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:34:90.12:0,90,1785	0/1:8,2:10:65.19:87,0,65	0/0:38,0:7:15.41:0,15,192	0/0:74,0:16:21.40:0,21,205	0/0:34,0:33:51.65:0,52,462	0/0:26,0:26:75.26:0,75,1655	0/0:13,0:13:39.12:0,39,747	0/0:34,0:25:9.05:0,9,834	0/0:19,0:19:57.15:0,57,1170	0/0:21,0:20:25.62:0,26,462	0/0:12,0:12:4.08:0,4,245	0/0:24,0:24:27.09:0,27,574	0/0:21,0:21:54.18:0,54,1075	0/0:32,0:32:33.48:0,33,713	0/1:18,0:18:35.39:35,0,111	0/1:15,4:19:66.30:145,0,66	1/1:11,1:12:0.13:99,0,0	0/0:9,0:8:20.86:0,21,170	0/0:15,0:14:21.05:0,21,537	0/0:7,0:7:21.04:0,21,299	0/0:20,0:20:50.99:0,51,661	0/0:15,0:15:33.08:0,33,531	0/0:22,0:22:46.24:0,46,783	0/0:24,0:23:54.38:0,54,831	0/0:23,0:22:6.02:0,6,189	0/1:37,0:37:24.51:25,0,994	0/1:19,0:18:95.58:96,0,329	0/0:8,0:8:6.12:0,6,235
chr10	42690003	.	AAGAAAAG	A	1784.31	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=4.152;DP=636;FS=6.150;HRun=0;HaplotypeScore=181.5761;InbreedingCoeff=0.0634;MQ=51.74;MQ0=17;MQRankSum=-0.704;QD=10.14;ReadPosRankSum=4.436;VQSLOD=2.1824;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:35:96.26:0,96,2627	0/0:10,0:10:18.41:0,18,217	0/0:36,0:5:14.71:0,15,179	0/0:70,0:15:14.97:0,15,167	1/1:0,32:31:81.13:1512,81,0	0/0:26,0:26:78.27:0,78,2326	0/0:14,0:14:39.12:0,39,960	0/0:36,0:27:69.09:0,69,953	0/0:21,0:21:63.22:0,63,1729	0/1:23,0:22:29.40:29,0,350	0/0:11,0:11:17.95:0,18,220	0/0:23,0:23:30.03:0,30,642	0/0:21,0:21:52.68:0,53,942	0/0:30,0:30:36.11:0,36,752	0/1:18,0:18:96.90:97,0,126	0/0:17,0:17:20.35:0,20,415	0/0:12,0:12:17.88:0,18,149	0/0:9,0:8:13.30:0,13,90	0/1:15,0:14:16.74:17,0,337	0/0:7,0:7:8.48:0,8,85	0/0:21,0:21:39.69:0,40,458	0/0:15,0:15:30.45:0,30,432	0/0:21,0:21:42.56:0,43,744	0/0:24,0:23:41.43:0,41,528	0/1:22,0:21:20.98:21,0,197	0/1:37,0:37:99:104,0,670	0/1:19,0:18:99:137,0,250	0/1:10,0:10:12.19:12,0,192
chr10	42690005	.	GAA	G	735.85	PASS	AB=0.891;AC=6;AF=0.107;AN=56;BaseQRankSum=6.161;DP=636;FS=0.525;HRun=4;HaplotypeScore=142.1585;InbreedingCoeff=0.2691;MQ=51.90;MQ0=18;MQRankSum=-1.662;QD=8.27;ReadPosRankSum=4.992;VQSLOD=-0.1262;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:34:93.10:0,93,921	0/1:8,2:10:48.73:49,0,86	0/0:36,0:5:14.86:0,15,156	0/0:66,0:15:7.39:0,7,118	1/1:32,0:31:74.49:682,74,0	0/0:28,0:28:84.26:0,84,1433	0/0:14,0:14:42.12:0,42,666	0/0:35,0:26:69.21:0,69,1030	0/0:21,0:21:63.20:0,63,1066	0/0:24,0:23:48.16:0,48,598	0/0:12,0:12:21.06:0,21,317	0/0:23,0:23:27.55:0,28,425	0/0:21,0:21:54.18:0,54,813	0/0:30,0:30:35.98:0,36,541	0/1:18,0:18:5.59:6,0,118	0/1:13,4:17:63.19:63,0,122	0/1:11,1:12:11.42:63,0,11	0/0:9,0:8:15.83:0,16,152	0/0:15,0:14:34.29:0,34,572	0/0:7,0:7:20.93:0,21,279	0/0:21,0:21:48.61:0,49,698	0/0:16,0:16:25.10:0,25,374	0/0:22,0:22:42.56:0,43,611	0/0:22,0:22:37.81:0,38,559	0/0:24,0:23:22.20:0,22,355	0/0:37,0:37:57.08:0,57,1073	0/0:17,0:16:16.69:0,17,477	0/0:10,0:10:22.14:0,22,309
chr10	42690020	.	GAAAAGA	G	1768.57	PASS	AB=0.857;AC=11;AF=0.196;AN=56;BaseQRankSum=3.731;DP=637;FS=8.267;HRun=0;HaplotypeScore=175.5139;InbreedingCoeff=-0.1683;MQ=61.13;MQ0=17;MQRankSum=-3.007;QD=8.67;ReadPosRankSum=-1.042;VQSLOD=1.9297;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:39:99:0,117,3373	0/0:12,0:12:32.97:0,33,520	0/0:37,0:11:13.33:0,13,503	0/0:55,0:17:29.61:0,30,427	0/0:30,0:29:2.39:0,2,660	0/0:27,0:27:81.28:0,81,2429	0/0:16,0:16:45.14:0,45,1259	0/0:39,0:32:20.60:0,21,589	0/0:19,0:19:57.17:0,57,1642	0/0:21,0:21:41.33:0,41,966	0/0:10,0:10:21.07:0,21,522	0/1:9,15:24:41.51:42,0,228	0/1:23,0:23:99:680,0,242	0/1:11,14:25:85.81:86,0,216	0/0:21,0:21:25.74:0,26,507	0/1:20,0:20:65.50:65,0,269	0/0:17,0:17:26.94:0,27,811	0/0:8,0:7:18.02:0,18,392	0/1:22,0:21:14.92:15,0,352	0/1:7,0:7:37.59:38,0,76	0/0:22,0:22:11.86:0,12,356	0/1:5,8:13:0.24:280,0,0	0/1:7,15:22:99:141,0,144	0/1:20,1:20:69.15:428,0,69	0/0:22,0:21:37.64:0,38,769	0/0:37,0:37:91.83:0,92,2100	0/1:19,0:18:99:113,0,173	0/1:8,0:8:29.04:29,0,112
chr10	42690025	.	GA	G	3463.49	PASS	AB=0.960;AC=23;AF=0.411;AN=56;BaseQRankSum=3.710;DP=628;FS=32.409;HRun=9;HaplotypeScore=120.5491;InbreedingCoeff=0.9160;MQ=63.36;MQ0=13;MQRankSum=-3.538;QD=14.37;ReadPosRankSum=0.862;VQSLOD=1.6965;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:40:99:0,115,1266	0/0:11,0:11:33.10:0,33,379	0/0:37,0:11:2.30:0,2,224	0/0:48,0:19:30.04:0,30,272	0/0:26,0:25:45.13:0,45,518	0/0:27,0:27:78.23:0,78,900	0/0:16,0:16:45.11:0,45,500	1/1:9,30:34:87.01:788,87,0	0/0:22,0:22:60.15:0,60,671	0/0:19,0:19:42.12:0,42,484	0/0:10,0:10:21.06:0,21,242	0/1:23,1:24:0.17:40,0,0	1/1:8,15:23:23.75:314,24,0	1/1:21,2:23:9.84:75,10,0	0/0:22,0:22:33.08:0,33,367	0/0:21,0:21:54.12:0,54,523	0/0:19,0:19:48.13:0,48,542	0/0:8,0:8:21.03:0,21,228	1/1:1,19:19:54.03:494,54,0	1/1:0,9:9:24.01:219,24,0	1/1:1,22:23:48.01:439,48,0	1/1:10,2:12:21:187,21,0	1/1:20,2:22:9.24:93,9,0	1/1:12,9:20:15.92:184,16,0	0/0:21,0:20:39.12:0,39,448	0/0:37,1:38:74.83:0,75,1111	1/1:0,17:16:48.03:439,48,0	1/1:1,7:8:21.01:192,21,0
chr10	42690026	.	A	AAAAG	2986.45	PASS	AB=1.000;AC=18;AF=0.321;AN=56;BaseQRankSum=4.215;DP=631;FS=18.556;HRun=0;HaplotypeScore=149.1439;InbreedingCoeff=0.5001;MQ=63.42;MQ0=13;MQRankSum=-3.273;QD=12.24;ReadPosRankSum=-4.038;VQSLOD=0.6782;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:41:99:0,103,1711	0/0:11,0:11:32.57:0,33,374	0/0:37,0:11:6.83:0,7,285	0/0:48,0:19:21.66:0,22,305	0/0:27,0:26:55.46:0,55,823	0/0:28,0:28:81.27:0,81,1433	0/0:17,0:17:45.14:0,45,749	0/1:40,0:35:99:130,0,366	0/0:22,0:22:63.19:0,63,1058	0/0:19,0:19:42.14:0,42,703	0/0:10,0:10:21.07:0,21,390	1/1:21,4:25:26.98:470,27,0	1/1:19,4:23:59.62:788,60,0	1/1:18,5:23:24.01:477,24,0	0/0:22,0:22:33.09:0,33,504	0/0:20,0:20:59.72:0,60,697	0/0:19,0:19:52.02:0,52,619	0/0:9,0:9:20.90:0,21,286	0/1:20,0:19:70.79:71,0,188	0/1:10,0:10:11.87:101,0,12	0/1:23,0:23:62.53:63,0,225	1/1:12,0:12:24.05:344,24,0	1/1:19,2:21:21.60:365,22,0	1/1:20,2:21:34.86:310,35,0	0/0:21,0:20:39.13:0,39,638	0/0:35,0:35:99:0,102,1780	0/1:17,0:16:23.67:24,0,184	0/1:8,0:8:41.24:41,0,94
chr10	42691200	.	C	CGT	645.88	PASS	AB=0.929;AC=23;AF=0.500;AN=46;BaseQRankSum=-0.583;DP=659;FS=1.131;HRun=0;HaplotypeScore=105.7229;InbreedingCoeff=0.1646;MQ=61.00;MQ0=12;MQRankSum=-1.158;QD=1.70;ReadPosRankSum=1.028;VQSLOD=1.3937;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:24:5.75:0,6,62	0/0:7,0:7:3:0,3,32	./.	./.	0/0:22,0:23:2.84:0,3,14	0/0:21,0:21:2.84:0,3,14	0/0:27,0:30:5.42:0,5,28	./.	0/0:24,0:28:8.49:0,8,42	0/1:10,0:9:0:0,0,0	1/1:22,0:22:3:25,3,0	0/1:25,0:25:19.65:20,0,25	1/1:21,2:29:6.02:52,6,0	1/1:21,4:25:2.60:44,3,0	0/1:24,1:25:34.90:35,0,55	1/1:17,0:25:6.87:75,7,0	0/0:26,0:26:5.74:0,6,64	0/1:35,1:35:41.70:107,0,42	./.	0/0:17,0:16:5.94:0,6,63	0/1:53,4:57:0:0,0,0	1/1:16,0:16:5.99:49,6,0	1/1:11,1:12:3.01:44,3,0	0/1:29,4:34:14.35:181,0,14	1/1:22,0:22:3:26,3,0	1/1:18,2:20:9.91:89,10,0	0/1:14,5:19:25.87:38,0,26	./.
chr10	42693479	.	G	GT	13551.62	PASS	AB=1.000;AC=37;AF=0.661;AN=56;BaseQRankSum=-3.077;DP=559;FS=2.458;HRun=1;HaplotypeScore=69.1363;InbreedingCoeff=0.9165;MQ=61.63;MQ0=0;MQRankSum=-0.529;QD=37.85;ReadPosRankSum=-0.157;VQSLOD=5.2467;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,111,1549	0/0:6,0:6:15.05:0,15,210	0/0:18,0:13:39.13:0,39,543	0/1:20,0:11:6.71:7,0,227	0/0:25,0:25:69.21:0,69,947	0/0:16,0:16:48.16:0,48,670	0/0:30,0:30:87.29:0,87,1217	1/1:2,18:18:48.16:747,48,0	0/0:24,0:24:72.21:0,72,972	1/1:0,19:17:51.15:788,51,0	1/1:0,15:14:30.10:478,30,0	1/1:2,21:23:54.18:860,54,0	1/1:0,14:14:30.10:477,30,0	1/1:0,21:20:51.17:814,51,0	1/1:1,27:27:66.23:1053,66,0	0/0:13,0:13:39.13:0,39,545	0/0:31,0:31:87.27:0,87,1193	1/1:1,26:27:69.24:1103,69,0	1/1:0,12:12:36.10:546,36,0	1/1:1,15:15:36.12:574,36,0	1/1:0,33:32:87.30:1390,87,0	1/1:0,20:19:57.19:910,57,0	1/1:3,16:19:51.17:811,51,0	1/1:1,23:24:63.21:994,63,0	1/1:0,17:17:51.17:815,51,0	1/1:0,13:12:36.12:575,36,0	1/1:1,13:14:33.11:513,33,0	1/1:1,2:3:6.02:96,6,0
chr10	42693640	.	GAAAT	G	4561.29	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=10.553;DP=607;FS=4.109;HRun=0;HaplotypeScore=107.8096;InbreedingCoeff=0.9992;MQ=70.50;MQ0=0;MQRankSum=-3.770;QD=44.72;ReadPosRankSum=5.102;VQSLOD=5.3049;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:80.71:0,81,1908	0/0:8,0:8:24.08:0,24,633	0/0:22,0:19:35.99:0,36,868	0/0:20,0:20:48.11:0,48,1060	0/0:34,0:34:99:0,102,2586	0/0:20,0:20:60.19:0,60,1567	0/0:15,0:15:42.14:0,42,1094	0/0:41,0:41:99:0,123,2916	0/0:21,0:21:63.22:0,63,1649	0/0:22,0:21:60.21:0,60,1635	0/0:22,0:22:66.21:0,66,1678	1/1:0,15:15:33.11:652,33,0	1/1:1,14:15:35.86:716,36,0	1/1:1,18:18:39.13:766,39,0	0/0:21,0:20:60.17:0,60,1613	0/0:26,0:26:78.10:0,78,2003	0/0:25,0:25:75.24:0,75,2007	0/0:19,0:19:51.16:0,51,1220	0/0:14,0:14:39.05:0,39,953	0/0:35,0:35:99:0,105,2734	0/0:13,0:13:36.12:0,36,952	1/1:1,17:18:48.16:957,48,0	1/1:0,22:22:48.12:956,48,0	1/1:0,13:13:27.09:514,27,0	0/0:27,0:26:81.28:0,81,2122	0/0:29,0:28:84.28:0,84,2234	0/0:27,0:27:78.26:0,78,1960	0/0:14,0:14:42.14:0,42,1101
chr10	42693744	.	C	CAA	12023.46	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=6.540;DP=560;FS=9.621;HRun=1;HaplotypeScore=103.9357;InbreedingCoeff=0.9872;MQ=84.97;MQ0=0;MQRankSum=-4.908;QD=49.28;ReadPosRankSum=1.187;VQSLOD=3.8837;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:42.13:0,42,282	0/0:3,0:3:8.82:0,9,58	0/0:23,0:23:64.68:0,65,947	0/0:17,0:17:41.54:0,42,522	0/0:26,0:26:78.25:0,78,1166	0/0:26,0:26:75.25:0,75,1147	0/0:16,0:16:48.13:0,48,690	1/1:3,33:36:99:1949,105,0	0/0:26,0:26:78.25:0,78,1173	1/1:0,21:22:63.22:1217,63,0	1/1:1,12:13:36.01:601,36,0	0/0:14,0:14:39.12:0,39,576	0/0:18,0:18:51.17:0,51,779	0/0:21,0:21:60.20:0,60,918	1/1:3,23:26:66.11:1162,66,0	0/0:26,0:26:46.02:0,46,374	0/0:20,0:20:58.82:0,59,373	1/1:3,18:21:48.16:927,48,0	1/1:3,16:20:51.16:949,51,0	1/1:2,14:16:42.10:773,42,0	1/1:1,12:14:33.07:600,33,0	0/0:15,0:15:45.15:0,45,687	0/0:20,0:20:57.18:0,57,849	0/0:27,0:27:81.24:0,81,1197	1/1:2,15:17:48.12:889,48,0	1/1:0,24:24:69.23:1295,69,0	1/1:2,26:28:74.49:1430,74,0	1/1:1,6:7:12.04:232,12,0
chr10	42694445	.	A	AG	21697.45	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=2.543;DP=640;FS=1.599;HRun=0;HaplotypeScore=83.3860;InbreedingCoeff=0.9953;MQ=95.50;MQ0=0;MQRankSum=-7.551;QD=43.31;ReadPosRankSum=5.436;VQSLOD=5.0002;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,36:36:96.33:1445,96,0	1/1:0,8:8:24.08:358,24,0	0/0:33,0:34:84.17:0,84,1212	0/0:30,0:30:74.40:0,74,1051	1/1:0,9:9:27.09:396,27,0	0/0:15,0:15:45.15:0,45,628	0/0:31,0:31:90.29:0,90,1233	1/1:1,20:21:60.20:960,60,0	0/0:29,0:29:87.27:0,87,1198	1/1:0,24:24:72.21:1031,72,0	1/1:0,16:16:48.16:720,48,0	1/1:0,28:28:84.29:1343,84,0	1/1:1,25:26:72.25:1150,72,0	1/1:1,31:32:75.26:1197,75,0	1/1:0,31:31:87.29:1300,87,0	1/1:0,37:37:99:1468,99,0	1/1:1,26:27:78.26:1164,78,0	1/1:0,24:24:66.22:992,66,0	1/1:2,21:23:66.22:1031,66,0	1/1:0,9:9:27.09:432,27,0	1/1:2,26:28:78.23:1218,78,0	1/1:0,17:17:48.16:767,48,0	1/1:0,7:7:18.06:288,18,0	1/1:0,37:37:99:1727,108,0	1/1:0,22:22:63.21:943,63,0	1/1:0,18:18:54.18:811,54,0	1/1:0,15:15:42.14:670,42,0	1/1:0,6:6:18.06:288,18,0
chr10	42694666	.	ATAT	A	504.63	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.426;DP=794;FS=13.435;HRun=0;HaplotypeScore=128.9803;InbreedingCoeff=0.9993;MQ=83.69;MQ0=0;MQRankSum=-2.399;QD=21.03;ReadPosRankSum=0.474;VQSLOD=3.0061;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,141,3146	0/0:10,0:10:30.08:0,30,634	0/0:26,0:26:64.07:0,64,1364	0/0:20,0:20:51.17:0,51,1046	1/1:2,22:24:35.80:599,36,0	0/0:27,0:27:81.28:0,81,1835	0/0:32,0:32:93.32:0,93,2108	0/0:37,0:37:99:0,102,2259	0/0:29,0:29:84.29:0,84,1886	0/0:32,0:32:90.31:0,90,2028	0/0:16,0:16:48.15:0,48,1044	0/0:34,0:34:99:0,102,2241	0/0:47,0:47:99:0,135,3031	0/0:32,0:32:90.27:0,90,1977	0/0:34,0:34:93.32:0,93,2107	0/0:27,0:27:81.26:0,81,1775	0/0:28,0:28:81.28:0,81,1830	0/0:23,0:23:69.20:0,69,1462	0/0:22,0:22:63.22:0,63,1399	0/0:24,0:24:57.20:0,57,1274	0/0:48,0:48:99:0,144,3224	0/0:28,0:28:84.29:0,84,1903	0/0:19,0:19:57.20:0,57,1274	0/0:40,0:40:99:0,117,2608	0/0:29,0:29:87.30:0,87,1968	0/0:25,0:25:69.24:0,69,1549	0/0:19,0:18:57.20:0,57,1249	0/0:14,0:14:42.14:0,42,946
chr10	42695988	.	TG	T	5659.72	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=11.157;DP=821;FS=1.468;HRun=2;HaplotypeScore=81.5455;InbreedingCoeff=1.0000;MQ=72.61;MQ0=0;MQRankSum=-1.449;QD=35.60;ReadPosRankSum=-2.105;VQSLOD=4.4664;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,147,2190	0/0:19,0:19:57.19:0,57,854	0/0:17,0:17:51.15:0,51,706	0/0:23,0:23:65.92:0,66,898	0/0:24,0:24:69.23:0,69,1031	0/0:38,0:38:99:0,111,1622	0/0:29,0:29:87.22:0,87,1250	1/1:1,31:32:93.21:1143,93,0	0/0:23,0:23:69.23:0,69,1034	0/0:36,0:36:99:0,105,1530	0/0:25,0:25:75.24:0,75,1102	0/0:28,0:28:78.26:0,78,1165	0/0:38,0:38:99:0,111,1642	0/0:31,0:31:90.28:0,90,1323	0/0:36,0:36:99:0,105,1542	0/0:34,0:34:99:0,99,1471	0/0:33,0:33:99:0,99,1475	0/0:20,0:20:54.18:0,54,808	1/1:0,22:22:66.21:856,66,0	1/1:0,31:31:81.26:1051,81,0	1/1:0,29:29:84.27:1090,84,0	0/0:28,0:28:81.26:0,81,1194	0/0:23,0:23:69.22:0,69,1014	0/0:37,0:37:99:0,108,1618	0/0:37,0:37:99:0,108,1613	0/0:31,0:31:90.30:0,90,1330	1/1:2,25:27:69.22:896,69,0	1/1:0,18:18:48.16:623,48,0
chr10	42696072	.	G	GCTGACTGACTGA	19971.20	PASS	AB=1.000;AC=43;AF=0.796;AN=54;BaseQRankSum=2.236;DP=791;FS=1.076;HRun=0;HaplotypeScore=299.0504;InbreedingCoeff=0.8022;MQ=58.21;MQ0=2;MQRankSum=-10.806;QD=31.50;ReadPosRankSum=-1.226;VQSLOD=3.2290;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:35,7:43:17.99:1049,18,0	1/1:14,0:14:9.02:338,9,0	0/0:23,0:18:20.96:0,21,543	0/0:32,0:31:35.59:0,36,842	1/1:23,0:39:18.05:459,18,0	0/0:25,0:25:48.16:0,48,1583	0/0:25,0:26:55.40:0,55,1643	1/1:45,0:45:49.41:912,49,0	0/0:33,0:34:63.19:0,63,1886	1/1:19,4:26:30.10:1313,30,0	1/1:19,5:27:9.03:426,9,0	1/1:22,0:22:15.05:776,15,0	1/1:32,0:32:9.03:444,9,0	1/1:31,0:31:18.06:929,18,0	1/1:22,19:44:42.14:2448,42,0	1/1:12,14:31:48.16:2798,48,0	1/1:22,5:28:18.06:950,18,0	1/1:16,5:24:24.04:1100,24,0	0/1:23,0:23:6.20:148,0,6	1/1:20,0:20:9.03:136,9,0	./.	1/1:28,0:28:18.06:594,18,0	1/1:32,0:32:10.66:618,11,0	1/1:18,0:18:5.93:309,6,0	1/1:21,7:31:12.04:601,12,0	1/1:28,8:37:63.21:2877,63,0	1/1:29,0:29:45.15:613,45,0	1/1:8,0:8:9.03:132,9,0
chr10	42696093	.	C	CTGAATGAA	10687.24	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=14.001;DP=821;FS=6.923;HRun=0;HaplotypeScore=245.4952;InbreedingCoeff=-0.1357;MQ=53.33;MQ0=3;MQRankSum=-13.267;QD=15.88;ReadPosRankSum=7.302;VQSLOD=2.5670;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:42,0:42:99:179,0,385	0/0:12,0:12:9:0,9,98	0/0:29,0:19:47.28:0,47,1057	0/0:26,0:24:53.61:0,54,1156	0/1:43,0:42:99:481,0,551	0/0:24,0:24:72.25:0,72,1739	0/0:27,0:27:72.24:0,72,1751	1/1:43,0:43:99:1330,102,0	0/0:30,0:30:87.23:0,87,2024	0/1:32,0:31:99:225,0,731	0/1:27,0:27:99:203,0,240	0/1:27,0:27:99:317,0,122	0/1:32,0:32:67.63:163,0,68	0/1:39,0:39:19.92:390,0,20	0/1:43,0:43:99:902,0,275	0/1:36,0:36:99:913,0,328	0/1:26,0:26:99:388,0,214	0/1:24,0:23:99:149,0,450	1/1:5,14:21:54.11:1178,54,0	1/1:0,17:19:21.07:533,21,0	1/1:2,10:17:2.89:40,3,0	0/1:31,0:31:53.93:54,0,390	0/1:34,0:34:99:246,0,182	1/1:21,0:21:2.92:70,3,0	0/1:30,0:30:99:253,0,360	0/1:42,0:42:99:328,0,1216	1/1:3,29:39:51.13:1961,51,0	1/1:0,5:5:9.03:383,9,0
chr10	42696101	.	C	CTGACTGACTGACTGACTGAA	25756.36	PASS	AB=1.000;AC=34;AF=0.607;AN=56;BaseQRankSum=12.120;DP=802;FS=6.257;HRun=0;HaplotypeScore=382.8891;InbreedingCoeff=0.0861;MQ=53.81;MQ0=3;MQRankSum=-14.748;QD=38.56;ReadPosRankSum=3.935;VQSLOD=2.1376;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:42,0:42:99:645,0,251	0/1:11,0:11:27.94:992,0,28	0/0:24,0:16:38.86:0,39,871	0/0:22,0:20:31.56:0,32,1065	0/1:40,0:39:99:107,0,192	0/0:27,0:27:75.12:0,75,2540	0/0:29,0:29:16.37:0,16,2486	1/1:42,0:42:99:1680,123,0	0/0:32,0:32:87.17:0,87,3040	0/1:29,0:28:99:958,0,338	0/1:25,0:25:99:323,0,117	1/1:11,19:32:36.12:2667,36,0	1/1:14,15:44:39.13:2886,39,0	1/1:14,22:44:48.03:4334,48,0	0/1:39,0:39:99:1316,0,105	0/1:37,0:37:99:1827,0,143	0/1:27,0:27:99:686,0,196	0/1:21,0:20:99:323,0,183	0/1:18,0:18:6.78:430,0,7	1/1:12,0:12:18.51:104,19,0	1/1:9,0:9:8.18:50,8,0	1/1:28,0:28:65.50:1401,65,0	1/1:11,14:33:23.17:2131,23,0	1/1:9,0:28:11.73:963,12,0	0/1:25,0:25:99:373,0,118	0/1:42,0:42:99:1267,0,398	1/1:36,0:36:51.11:276,51,0	1/1:4,0:4:6.29:19,6,0
chr10	42697185	.	C	CT	7682.65	PASS	AB=0.833;AC=32;AF=0.571;AN=56;BaseQRankSum=-9.973;DP=649;FS=8.168;HRun=10;HaplotypeScore=67.1219;InbreedingCoeff=0.8149;MQ=74.81;MQ0=0;MQRankSum=0.246;QD=20.27;ReadPosRankSum=-0.002;VQSLOD=5.5104;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,34:39:93.23:990,93,0	1/1:5,9:14:24.06:256,24,0	0/1:13,0:12:9.93:10,0,20	0/0:13,0:13:6.59:0,7,57	0/0:30,0:30:55.98:0,56,466	0/0:29,0:29:71.90:0,72,591	0/0:23,0:23:56.92:0,57,468	1/1:5,20:25:57.09:589,57,0	0/0:20,0:20:35.89:0,36,295	0/0:30,0:30:37.11:0,37,467	0/0:24,0:24:47.88:0,48,391	1/1:4,24:30:45.25:663,45,0	1/1:4,32:37:84.04:870,84,0	1/1:7,16:24:11.28:309,11,0	0/0:33,0:35:76.90:0,77,619	1/1:5,17:23:23.31:438,23,0	1/1:5,15:20:1.84:430,2,0	0/0:21,0:22:49.97:0,50,400	1/1:3,14:17:44.95:462,45,0	1/1:3,29:34:86.74:844,87,0	1/1:0,11:11:24.06:256,24,0	1/1:8,12:20:30.06:312,30,0	1/1:6,19:25:20.36:419,20,0	1/1:3,6:10:14.91:143,15,0	0/0:23,0:24:58.92:0,59,470	0/0:19,0:19:44.92:0,45,366	1/1:4,25:29:56.77:608,57,0	0/1:4,4:8:12.61:84,0,13
chr10	42697636	.	A	AT	6835.42	PASS	AB=0.875;AC=25;AF=0.446;AN=56;BaseQRankSum=-14.737;DP=663;FS=10.195;HRun=9;HaplotypeScore=76.5095;InbreedingCoeff=0.9162;MQ=81.88;MQ0=0;MQRankSum=-0.858;QD=23.41;ReadPosRankSum=-0.331;VQSLOD=5.0262;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:3,0:26:42.78:0,43,125	0/0:0,0:7:14.26:0,14,42	0/0:15,0:16:31.66:0,32,246	0/0:20,0:21:10.23:0,10,227	0/0:36,0:36:98.94:0,99,854	0/0:24,0:24:56.96:0,57,491	0/1:18,3:21:36.55:37,0,406	1/1:7,31:38:46.26:945,46,0	0/0:19,0:19:47.97:0,48,417	0/0:34,0:34:89.98:0,90,781	0/0:25,0:25:65.96:0,66,573	1/1:1,4:6:14.87:147,15,0	1/1:4,20:24:54.11:585,54,0	1/1:6,26:32:43.64:704,44,0	0/0:25,0:25:59.98:0,60,521	0/0:6,0:32:50.92:0,51,149	0/0:2,0:27:48.89:0,49,144	0/0:17,0:17:41.97:0,42,364	1/1:3,18:22:50.21:586,50,0	1/1:4,24:28:63.13:683,63,0	1/1:3,19:22:57.15:631,57,0	1/1:3,18:21:48.09:518,48,0	1/1:2,23:25:37.12:638,37,0	1/1:1,13:16:32.75:327,33,0	0/0:28,1:29:41.79:0,42,592	0/0:33,0:33:98.98:0,99,859	1/1:4,24:28:29.10:769,29,0	1/1:0,9:9:24.06:265,24,0
chr10	42699889	.	TCCATCCACCCAC	T	4307.26	PASS	AB=0.597;AC=7;AF=0.125;AN=56;BaseQRankSum=9.929;DP=628;FS=7.018;HRun=0;HaplotypeScore=202.2336;InbreedingCoeff=0.8231;MQ=70.76;MQ0=5;MQRankSum=-9.285;QD=37.13;ReadPosRankSum=3.440;VQSLOD=3.7847;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:14,29:43:28.61:1089,0,29	1/1:3,12:15:18.06:609,18,0	0/0:32,0:27:26.91:0,27,729	0/0:21,0:17:23.15:0,23,616	0/0:15,0:15:33.10:0,33,1605	0/0:24,0:24:51.18:0,51,2524	0/0:15,0:15:36.12:0,36,1829	0/0:31,0:31:55.35:0,55,1776	0/0:23,0:23:57.18:0,57,2691	0/0:24,0:24:39.04:0,39,1695	0/0:23,0:23:66.21:0,66,3125	0/0:21,0:21:45.10:0,45,1893	0/0:33,0:33:84.27:0,84,4284	0/0:14,0:14:36.12:0,36,1948	0/0:28,0:28:60.21:0,60,3333	1/1:5,31:36:60.02:2100,60,0	1/1:2,20:22:13.44:509,13,0	0/0:17,0:17:36.07:0,36,1597	0/0:16,0:13:21.07:0,21,696	0/0:20,0:20:36.11:0,36,1733	0/0:35,0:35:75.23:0,75,3738	0/0:11,0:11:33.11:0,33,1730	0/0:15,0:15:42.14:0,42,2288	0/0:22,0:21:48.16:0,48,2237	0/0:23,0:23:54.17:0,54,2652	0/0:16,0:16:33.11:0,33,1584	0/0:24,0:24:54.19:0,54,2951	0/0:9,0:9:24.04:0,24,1089
chr10	42701185	.	TTGACCAGCTTGA	T	4374.79	PASS	AB=0.531;AC=7;AF=0.125;AN=56;BaseQRankSum=9.874;DP=630;FS=0.586;HRun=0;HaplotypeScore=213.8241;InbreedingCoeff=0.8307;MQ=90.50;MQ0=0;MQRankSum=-9.289;QD=82.54;ReadPosRankSum=0.196;VQSLOD=4.7021;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,13:17:42.14:1422,42,0	1/1:2,4:6:15.05:521,15,0	0/0:26,0:26:42.48:0,42,2713	0/0:26,0:26:72.25:0,72,3839	0/0:36,0:36:99:0,108,6422	0/0:20,0:20:60.21:0,60,3699	0/0:19,0:19:51.18:0,51,2936	0/0:30,0:30:90.30:0,90,5139	0/0:13,0:13:39.13:0,39,2389	0/0:26,0:26:75.26:0,75,4372	0/0:20,0:20:60.21:0,60,3512	0/0:26,0:26:78.25:0,78,4540	0/0:20,0:20:60.21:0,60,3403	0/0:24,0:24:63.22:0,63,3738	0/0:19,0:19:57.18:0,57,2987	0/1:2,15:17:99:1535,0,140	1/1:6,7:13:27.09:898,27,0	0/0:29,0:29:81.28:0,81,4571	0/0:33,0:33:93.32:0,93,5160	0/0:19,0:19:54.19:0,54,3306	0/0:20,0:20:54.19:0,54,3102	0/0:25,0:25:72.25:0,72,4101	0/0:34,0:34:96.33:0,96,5513	0/0:20,0:20:60.21:0,60,3512	0/0:22,0:22:60.21:0,60,3641	0/0:31,0:31:90.31:0,90,5317	0/0:25,0:25:66.23:0,66,4044	0/0:14,0:14:36.12:0,36,1910
chr10	42701251	.	C	CT	4171.37	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-1.295;DP=595;FS=3.025;HRun=8;HaplotypeScore=75.6936;InbreedingCoeff=0.9984;MQ=71.90;MQ0=2;MQRankSum=-0.387;QD=20.86;ReadPosRankSum=-0.640;VQSLOD=3.4475;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:32:62.17:317,62,0	1/1:0,1:8:22.89:136,23,0	0/0:32,0:24:39.16:0,39,375	0/0:14,0:9:20.94:0,21,179	0/0:31,1:32:49.41:0,49,701	0/0:23,0:22:60.02:0,60,546	0/0:16,0:16:45:0,45,403	1/1:11,22:34:68.13:720,68,0	0/0:10,0:10:27:0,27,242	0/0:19,0:19:42.01:0,42,384	0/0:13,0:13:39.02:0,39,357	0/0:25,0:25:66.01:0,66,598	0/0:20,0:21:53.05:0,53,473	0/0:20,0:20:51.01:0,51,461	0/0:24,0:24:63.02:0,63,572	1/1:3,1:15:34.26:193,34,0	1/1:3,3:18:40.06:223,40,0	0/0:20,0:20:48.34:0,48,462	1/1:2,24:26:75.14:833,75,0	1/1:4,17:21:48.07:525,48,0	1/1:1,12:13:36.11:415,36,0	0/0:30,0:30:84.04:0,84,769	0/0:22,0:22:51.01:0,51,466	0/0:21,0:21:56.82:0,57,521	0/0:25,0:24:69.02:0,69,625	0/0:27,0:27:69.03:0,69,631	1/1:3,20:23:48.14:554,48,0	1/1:1,9:10:23.81:254,24,0
chr10	42703666	.	A	AT	21180.99	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=0.414;DP=767;FS=5.957;HRun=0;HaplotypeScore=82.6600;InbreedingCoeff=0.9994;MQ=78.49;MQ0=0;MQRankSum=-1.304;QD=44.40;ReadPosRankSum=3.673;VQSLOD=4.9904;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,42:42:99:1867,117,0	1/1:0,14:14:39.13:623,39,0	0/0:20,0:20:54.16:0,54,714	0/0:16,0:16:48.14:0,48,637	1/1:0,33:33:93.32:1483,93,0	0/0:39,0:39:99:0,117,1619	0/0:16,0:16:48.16:0,48,671	1/1:0,31:31:90.26:1370,90,0	0/0:28,0:28:81.27:0,81,1132	0/0:36,0:36:99:0,105,1424	0/0:26,0:26:78.26:0,78,1088	1/1:0,35:35:96.33:1534,96,0	1/1:1,27:28:78.27:1247,78,0	1/1:0,42:42:99:1822,114,0	0/0:33,0:33:99:0,99,1313	1/1:1,33:34:60.39:1540,60,0	1/1:1,26:27:69.24:1102,69,0	0/0:21,0:21:63.21:0,63,879	1/1:1,18:19:54.17:834,54,0	1/1:1,37:38:99:1674,105,0	1/1:0,23:23:57.19:911,57,0	1/1:0,25:25:75.26:1198,75,0	1/1:1,24:25:69.24:1100,69,0	1/1:0,15:15:45.15:719,45,0	0/0:27,0:27:81.24:0,81,1083	0/0:28,0:28:78.19:0,78,1052	1/1:3,36:39:99:1820,117,0	1/1:0,7:7:21.07:336,21,0
chr10	42704560	.	TGTTG	T	3469.46	PASS	AB=0.909;AC=39;AF=0.750;AN=52;BaseQRankSum=5.938;DP=670;FS=2.113;HRun=0;HaplotypeScore=140.4067;InbreedingCoeff=0.1528;MQ=62.34;MQ0=8;MQRankSum=-1.363;QD=6.32;ReadPosRankSum=1.841;VQSLOD=2.8318;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:24,7:32:29.77:421,30,0	1/1:10,0:10:6.02:91,6,0	./.	./.	1/1:15,0:17:2.03:26,2,0	0/1:21,1:22:27.89:28,0,321	0/0:23,0:22:39.09:0,39,836	0/0:26,0:25:0:0,0,0	0/0:24,0:23:42.08:0,42,864	1/1:23,6:29:14.64:192,15,0	1/1:14,6:19:8.99:138,9,0	1/1:15,0:18:14.59:131,15,0	1/1:19,0:22:20.89:181,21,0	1/1:21,0:26:11.31:120,11,0	1/1:22,10:32:6.02:92,6,0	0/1:34,0:37:99:215,0,152	1/1:28,0:31:14.91:122,15,0	1/1:8,17:25:30.10:443,30,0	0/1:19,0:17:10.21:46,0,10	0/1:15,0:18:9.44:48,0,9	0/1:37,0:37:54.87:71,0,55	1/1:11,0:13:5.99:50,6,0	0/1:8,0:10:1.30:39,0,1	1/1:31,0:33:19.05:168,19,0	1/1:16,17:32:24.08:366,24,0	1/1:18,11:29:27.05:387,27,0	0/1:24,0:26:37.62:38,0,70	1/1:3,0:5:6.01:56,6,0
chr10	42704636	.	TGTTG	T	5326.45	PASS	AB=0.781;AC=29;AF=0.580;AN=50;BaseQRankSum=7.493;DP=667;FS=2.914;HRun=0;HaplotypeScore=138.8561;InbreedingCoeff=0.7816;MQ=56.18;MQ0=11;MQRankSum=-0.062;QD=13.32;ReadPosRankSum=3.488;VQSLOD=4.3600;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:8,0:25:1.61:2,0,12	1/1:6,3:9:4.26:90,4,0	./.	./.	0/1:9,0:20:16.27:47,0,16	0/0:5,0:17:24.08:0,24,403	0/0:31,0:30:45.15:0,45,962	./.	0/0:8,0:24:24.08:0,24,415	0/0:20,0:20:36.12:0,36,775	0/0:8,0:8:16.60:0,17,313	0/1:12,10:23:4.92:304,0,5	1/1:14,12:26:24.08:373,24,0	1/1:15,12:25:21.07:329,21,0	0/0:21,0:21:30.10:0,30,680	1/1:17,0:34:23.86:223,24,0	1/1:19,22:41:32.54:516,33,0	0/0:31,0:30:54.19:0,54,1221	1/1:16,6:20:18.05:254,18,0	1/1:8,9:17:26.47:360,26,0	1/1:13,27:41:39.13:597,39,0	1/1:10,16:26:33.03:469,33,0	1/1:6,7:13:17.89:271,18,0	1/1:14,30:44:47.83:750,48,0	0/0:19,0:19:35.79:0,36,764	0/0:20,0:20:42.14:0,42,924	1/1:12,12:24:30.10:461,30,0	1/1:2,6:8:18.06:282,18,0
chr10	42704643	.	T	TC	203.68	PASS	AB=0.676;AC=1;AF=0.018;AN=56;BaseQRankSum=4.186;DP=674;FS=2.635;HRun=0;HaplotypeScore=118.7505;InbreedingCoeff=-0.0187;MQ=54.49;MQ0=17;MQRankSum=-4.113;QD=8.86;ReadPosRankSum=-1.778;VQSLOD=3.5452;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:12,11:23:99:278,0,179	0/0:9,0:9:23.84:0,24,262	0/0:25,0:14:33:0,33,413	0/0:29,0:11:23.77:0,24,319	0/0:16,0:16:23.66:0,24,273	0/0:19,0:19:41.62:0,42,395	0/0:32,0:31:90.27:0,90,1214	0/0:27,0:21:57.14:0,57,715	0/0:23,0:23:35.99:0,36,392	0/0:20,0:20:57.18:0,57,782	0/0:11,0:10:27.09:0,27,370	0/0:21,0:21:50.42:0,50,526	0/0:25,0:25:62.37:0,62,660	0/0:29,0:27:62.44:0,62,674	0/0:23,0:23:51.15:0,51,693	0/0:33,0:33:67.97:0,68,711	0/0:40,0:40:79.91:0,80,796	0/0:32,0:31:81.27:0,81,1131	0/0:28,0:20:53.75:0,54,616	0/0:16,0:15:27.02:0,27,388	0/0:43,0:43:82.97:0,83,830	0/0:25,0:25:59.14:0,59,559	0/0:14,0:14:32.51:0,33,295	0/0:41,0:41:82.56:0,83,744	0/0:18,0:18:48.13:0,48,631	0/0:20,0:20:60.19:0,60,823	0/0:23,0:23:59.22:0,59,579	0/0:7,0:7:20.43:0,20,138
chr10	42705235	.	A	AAT	36627.05	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-12.266;DP=775;FS=4.296;HRun=0;HaplotypeScore=83.3061;InbreedingCoeff=0.9985;MQ=75.70;MQ0=0;MQRankSum=-5.688;QD=56.70;ReadPosRankSum=4.728;VQSLOD=4.9956;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,29:30:78.27:1581,78,0	1/1:0,16:16:45.15:914,45,0	0/0:12,0:12:23.18:0,23,385	0/0:22,0:22:57.10:0,57,756	1/1:0,34:34:99:1971,99,0	0/0:38,0:38:99:0,111,1782	0/0:28,0:28:81.28:0,81,1319	1/1:3,25:28:81.28:1632,81,0	0/0:29,0:29:84.27:0,84,1337	1/1:2,35:38:99:2256,111,0	1/1:0,22:22:66.23:1341,66,0	1/1:0,31:31:93.32:1890,93,0	1/1:4,34:38:99:2084,105,0	1/1:0,29:29:78.27:1585,78,0	1/1:1,42:43:99:2538,126,0	1/1:0,36:36:99:2010,99,0	1/1:1,18:19:57.20:1158,57,0	1/1:1,17:19:45.15:914,45,0	1/1:2,16:18:54.19:1096,54,0	1/1:0,25:28:75.21:1459,75,0	1/1:0,44:45:99:2560,126,0	1/1:0,27:29:81.28:1645,81,0	1/1:0,24:25:69.24:1403,69,0	1/1:2,21:23:57.20:1158,57,0	1/1:0,27:28:78.27:1584,78,0	1/1:0,26:27:81.26:1607,81,0	1/1:0,33:33:90.31:1814,90,0	1/1:0,7:7:21.07:427,21,0
chr10	42707329	.	CAAG	C	2920.84	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=10.716;DP=734;FS=1.031;HRun=0;HaplotypeScore=101.8861;InbreedingCoeff=0.9480;MQ=89.02;MQ0=0;MQRankSum=-2.661;QD=38.43;ReadPosRankSum=2.308;VQSLOD=4.7962;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:90.29:0,90,1954	0/0:9,0:9:27.09:0,27,612	0/0:24,0:24:62.99:0,63,1176	0/0:31,0:31:81.74:0,82,1630	1/1:0,37:37:84.29:1396,84,0	0/0:31,0:31:93.32:0,93,2104	0/0:21,0:21:54.17:0,54,1163	0/0:32,0:32:87.29:0,87,1925	0/0:24,0:24:66.23:0,66,1492	0/0:27,0:27:69.24:0,69,1562	0/0:17,0:17:48.16:0,48,1088	0/0:32,0:32:96.33:0,96,2157	0/0:34,0:34:99:0,99,2212	0/0:24,0:24:66.19:0,66,1406	0/0:39,0:39:99:0,117,2629	1/1:0,39:39:99:1646,99,0	0/0:26,0:26:75.24:0,75,1648	0/0:16,0:16:48.16:0,48,1075	0/0:23,0:23:66.20:0,66,1436	0/0:24,0:24:72.25:0,72,1631	0/0:22,0:22:66.23:0,66,1496	0/0:25,0:25:69.22:0,69,1504	0/0:32,0:32:93.32:0,93,2087	0/0:19,0:19:57.18:0,57,1248	0/0:18,0:18:54.19:0,54,1224	0/0:36,0:36:99:0,105,2378	0/0:36,0:35:99:0,108,2349	0/0:2,0:2:6.02:0,6,136
chr10	42708129	.	G	GA	1491.74	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.729;DP=697;FS=2.134;HRun=1;HaplotypeScore=73.8705;InbreedingCoeff=0.9999;MQ=85.62;MQ0=0;MQRankSum=-1.954;QD=36.38;ReadPosRankSum=1.677;VQSLOD=4.1721;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,102,1307	0/0:17,0:17:48.15:0,48,609	0/0:26,0:26:72.23:0,72,925	0/0:20,0:20:57.18:0,57,713	1/1:1,20:21:57.19:854,57,0	0/0:22,0:22:60.19:0,60,779	0/0:24,0:24:72.22:0,72,919	0/0:28,0:28:78.25:0,78,1000	0/0:25,0:25:72.23:0,72,935	0/0:36,0:36:99:0,99,1285	0/0:16,0:16:48.16:0,48,623	0/0:34,0:34:96.31:0,96,1241	0/0:30,0:30:90.29:0,90,1167	0/0:29,0:29:87.28:0,87,1129	0/0:45,0:45:99:0,132,1712	1/1:2,18:20:51.17:759,51,0	0/0:22,0:22:66.19:0,66,840	0/0:12,0:12:36.12:0,36,467	0/0:20,0:20:54.17:0,54,699	0/0:22,0:22:63.17:0,63,787	0/0:30,0:30:81.26:0,81,1051	0/0:23,0:23:66.21:0,66,856	0/0:16,0:16:48.14:0,48,607	0/0:25,0:25:69.22:0,69,895	0/0:26,0:26:75.23:0,75,959	0/0:33,0:33:99:0,99,1284	0/0:23,0:23:65.84:0,66,855	0/0:17,0:17:37.56:0,38,574
chr10	42709576	.	TGAGAGAGA	T	1541.88	PASS	AB=0.870;AC=19;AF=0.365;AN=52;BaseQRankSum=6.196;DP=569;FS=38.247;HRun=0;HaplotypeScore=168.5144;InbreedingCoeff=0.6717;MQ=67.86;MQ0=12;MQRankSum=-6.131;QD=7.41;ReadPosRankSum=1.058;VQSLOD=1.2376;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:36,6:42:6.02:146,6,0	0/0:8,0:9:9.03:0,9,293	./.	./.	1/1:10,0:16:14.54:225,15,0	0/0:20,0:23:6.48:0,6,91	0/0:13,0:20:17.96:0,18,147	0/0:22,0:22:9.92:0,10,291	0/0:17,0:22:12.02:0,12,154	0/0:25,0:25:18.53:0,19,471	0/0:14,0:15:6.02:0,6,130	1/1:14,5:20:9.02:205,9,0	1/1:7,6:13:9.03:223,9,0	1/1:11,5:16:9.03:205,9,0	0/0:22,0:22:6.02:0,6,86	1/1:12,0:18:18.06:335,18,0	0/1:17,0:20:22.82:23,0,33	0/0:4,0:4:6.86:0,7,67	0/0:21,0:20:18.95:0,19,572	0/0:26,0:26:21.04:0,21,540	0/0:13,0:13:3.01:0,3,66	1/1:18,3:22:9.03:205,9,0	1/1:21,3:24:3.01:74,3,0	1/1:14,1:16:5.23:81,5,0	0/0:13,0:13:24.08:0,24,867	0/0:18,0:17:24.07:0,24,528	0/0:20,0:20:22.89:0,23,629	0/0:3,0:3:3.01:0,3,106
chr10	42710418	.	C	CA	1325.15	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=16.196;DP=664;FS=1.732;HRun=0;HaplotypeScore=125.9653;InbreedingCoeff=0.9973;MQ=91.77;MQ0=0;MQRankSum=-15.841;QD=11.14;ReadPosRankSum=3.238;VQSLOD=4.1542;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,23:26:68.84:372,69,0	1/1:0,7:7:20.28:114,20,0	0/0:39,0:39:99:0,111,1495	0/0:24,0:25:56.99:0,57,691	0/0:26,0:26:78.26:0,78,1091	0/0:27,0:27:81.27:0,81,1131	0/0:36,0:36:99:0,108,1489	0/0:33,0:33:96.31:0,96,1329	0/0:23,0:23:69.20:0,69,930	0/0:23,0:23:69.23:0,69,965	0/0:17,0:17:48.63:0,49,670	1/1:1,10:11:31.58:170,32,0	1/1:0,17:17:44.60:227,45,0	1/1:1,18:20:51.88:253,52,0	0/0:35,0:35:99:0,105,1452	0/0:40,0:40:99:0,120,1661	0/0:40,0:40:99:0,120,1672	0/0:16,0:16:48.14:0,48,653	0/0:20,0:20:60.19:0,60,824	0/0:22,0:22:66.22:0,66,922	0/0:41,0:41:99:0,120,1660	1/1:0,10:9:25.09:118,25,0	1/1:0,12:12:30.54:149,31,0	1/1:0,16:16:28.12:131,28,0	0/0:18,0:18:51.17:0,51,713	0/0:27,0:27:81.27:0,81,1133	0/0:31,0:31:90.30:0,90,1257	0/0:6,0:6:18.06:0,18,252
chr10	42710430	.	C	CT	247.27	PASS	AB=0.579;AC=13;AF=0.232;AN=56;BaseQRankSum=12.496;DP=674;FS=1.979;HRun=0;HaplotypeScore=143.0110;InbreedingCoeff=0.8281;MQ=87.50;MQ0=0;MQRankSum=-12.402;QD=1.82;ReadPosRankSum=-0.560;VQSLOD=2.9348;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:8,24:32:19.22:85,19,0	1/1:2,7:9:6.51:15,7,0	0/0:33,0:33:99:0,99,1310	0/0:21,0:21:51.02:0,51,613	0/0:27,0:27:80.48:0,80,1093	0/0:25,0:25:72.23:0,72,990	0/0:31,0:31:93.26:0,93,1224	0/0:39,0:39:99:0,111,1490	0/0:21,0:21:63.21:0,63,880	0/0:23,0:23:69.23:0,69,965	0/0:17,0:17:48.16:0,48,670	1/1:8,10:18:16.70:97,17,0	0/1:6,16:22:0.14:57,0,0	1/1:9,19:28:17.84:125,18,0	0/0:34,0:34:99:0,102,1404	0/0:35,0:35:99:0,105,1434	0/0:33,0:33:99:0,99,1367	0/0:19,0:19:48.14:0,48,644	0/0:19,0:19:57.18:0,57,781	0/0:22,0:22:63.20:0,63,864	0/0:36,0:36:99:0,108,1510	1/1:0,10:9:2.34:6,2,0	1/1:5,12:17:3.62:27,4,0	0/0:6,15:21:1.16:0,1,4	0/0:15,0:15:45.14:0,45,614	0/0:28,0:28:78.23:0,78,1056	0/0:32,0:32:96.22:0,96,1298	0/0:7,0:7:21.07:0,21,289
chr10	42711895	.	ATG	A	771.64	PASS	AB=0.897;AC=23;AF=0.426;AN=54;BaseQRankSum=3.327;DP=672;FS=9.996;HRun=0;HaplotypeScore=84.9276;InbreedingCoeff=0.0708;MQ=66.95;MQ0=11;MQRankSum=-0.562;QD=2.00;ReadPosRankSum=2.261;VQSLOD=0.9812;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:40,1:40:18.23:18,0,107	0/1:7,8:15:29.82:115,0,30	./.	0/0:32,0:18:0:0,0,0	0/0:18,0:27:8.99:0,9,76	0/1:19,1:21:19.70:20,0,264	0/1:21,2:24:67.38:67,0,244	1/1:27,0:27:3.01:33,3,0	0/0:20,0:20:18.04:0,18,240	0/0:22,0:22:9.03:0,9,134	0/1:14,4:17:99:106,0,134	0/1:22,0:22:2.08:2,0,119	0/1:21,2:24:26.33:26,0,413	0/0:28,0:28:17.72:0,18,213	0/0:21,0:21:24.08:0,24,353	0/0:12,0:21:21.02:0,21,217	0/0:26,0:25:15.01:0,15,147	0/1:19,0:19:6.42:6,0,191	1/1:27,0:28:11.81:103,12,0	1/1:19,0:18:3.01:32,3,0	1/1:30,4:33:6.02:65,6,0	0/1:18,3:21:44.18:44,0,199	0/1:14,2:16:23.60:24,0,78	0/1:31,4:35:52.85:53,0,486	0/0:19,0:33:26.99:0,27,236	0/0:19,0:19:15.05:0,15,222	1/1:12,4:18:17.71:158,18,0	1/1:2,2:4:6.02:65,6,0
chr10	42712809	.	A	AATCATC	38901.33	PASS	AB=0.968;AC=47;AF=0.839;AN=56;BaseQRankSum=-7.033;DP=809;FS=0.802;HRun=0;HaplotypeScore=172.1264;InbreedingCoeff=0.8223;MQ=69.27;MQ0=0;MQRankSum=-15.374;QD=55.49;ReadPosRankSum=2.420;VQSLOD=5.2192;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:16,17:34:51.18:1623,51,0	1/1:1,7:8:24.08:808,24,0	0/0:20,0:20:24.08:0,24,484	0/0:25,0:25:60.14:0,60,1107	1/1:12,23:35:32.87:1057,33,0	0/0:23,0:23:63.22:0,63,1316	0/0:40,0:40:99:0,111,2265	1/1:9,21:32:78.21:1953,78,0	0/1:29,1:30:23.25:23,0,1473	1/1:5,19:24:68.72:2164,69,0	1/1:3,20:23:39.13:1265,39,0	1/1:10,20:34:75.26:2514,75,0	1/1:7,45:54:99:4439,132,0	1/1:9,29:43:75.26:2514,75,0	1/1:8,41:52:99:3818,114,0	1/1:7,33:43:12.39:2342,12,0	1/1:10,8:18:30.10:991,30,0	1/1:4,6:12:6.02:203,6,0	1/1:7,11:19:42.09:1200,42,0	1/1:3,23:27:60.21:1979,60,0	1/1:15,17:34:17.86:597,18,0	1/1:8,19:27:36.12:1123,36,0	1/1:3,14:18:27.09:906,27,0	1/1:19,20:39:38.93:1300,39,0	1/1:5,21:28:54.13:1645,54,0	1/1:11,16:28:48.16:1382,48,0	1/1:7,26:36:84.29:2749,84,0	1/1:0,3:3:9.03:305,9,0
chr10	42714558	.	C	CT	8251.30	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-18.492;DP=849;FS=0.959;HRun=1;HaplotypeScore=87.7012;InbreedingCoeff=0.9992;MQ=80.06;MQ0=0;MQRankSum=-2.648;QD=40.85;ReadPosRankSum=2.614;VQSLOD=5.2411;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:43:99:0,126,1618	0/0:12,0:12:36.12:0,36,467	0/0:24,0:24:69.20:0,69,864	0/0:17,0:17:44.79:0,45,529	0/0:31,0:31:93.30:0,93,1208	0/0:35,0:35:99:0,102,1325	0/0:31,0:31:93.30:0,93,1207	0/0:45,0:45:99:0,129,1664	0/0:36,0:36:99:0,105,1363	1/1:1,46:47:99:2045,138,0	1/1:0,22:22:60.20:899,60,0	0/0:39,0:39:99:0,117,1519	0/0:36,0:36:99:0,105,1363	0/0:36,0:36:99:0,102,1324	1/1:1,40:41:99:1619,108,0	0/0:43,0:43:99:0,129,1647	1/1:2,33:35:84.28:1259,84,0	1/1:0,19:19:57.19:854,57,0	0/0:15,0:15:45.15:0,45,584	0/0:27,0:27:81.24:0,81,1036	0/0:39,0:39:99:0,108,1402	0/0:29,0:29:78.25:0,78,1012	0/0:32,0:32:96.30:0,96,1232	0/0:34,0:34:99:0,99,1285	1/1:0,18:18:48.16:720,48,0	1/1:0,20:20:57.19:855,57,0	0/0:35,0:35:99:0,105,1363	0/0:7,0:7:21.07:0,21,273
chr10	42716180	.	AGT	A	50.47	PASS	AB=1.000;AC=11;AF=0.229;AN=48;BaseQRankSum=-1.628;DP=610;FS=12.158;HRun=0;HaplotypeScore=104.9594;InbreedingCoeff=0.4683;MQ=74.27;MQ0=13;MQRankSum=1.836;QD=0.48;ReadPosRankSum=2.966;VQSLOD=0.7157;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:39:29.12:0,29,267	1/1:5,0:5:2.84:14,3,0	./.	./.	0/0:15,0:15:8.39:0,8,90	0/0:21,0:21:12:0,12,147	0/0:30,0:30:6.78:0,7,44	0/0:17,0:16:0.89:0,1,2	0/0:14,0:14:6.01:0,6,68	0/0:29,0:28:17.84:0,18,128	0/0:13,0:13:9.03:0,9,105	1/1:22,0:22:2.99:25,3,0	1/1:21,2:22:3:31,3,0	./.	0/0:28,0:28:11.07:0,11,96	0/0:17,0:17:13.15:0,13,140	0/0:24,0:24:18.49:0,18,150	0/0:25,0:25:19.38:0,19,192	0/0:21,0:19:8.93:0,9,64	0/0:14,0:14:5.89:0,6,38	0/0:27,0:24:5.40:0,5,48	1/1:13,0:13:3:28,3,0	1/1:11,4:15:3.48:32,3,0	0/1:27,0:26:24.77:47,0,25	0/0:23,0:23:9.43:0,9,88	0/0:28,0:28:26.71:0,27,225	0/0:13,0:13:2.99:0,3,24	./.
chr10	42717459	.	TCAGGAAGACCTCCTCCTA	T	13977.61	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=15.490;DP=692;FS=1.796;HRun=0;HaplotypeScore=335.7955;InbreedingCoeff=0.9907;MQ=87.51;MQ0=0;MQRankSum=-15.762;QD=81.27;ReadPosRankSum=3.232;VQSLOD=4.0315;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,20:29:54.14:2115,54,0	1/1:4,4:8:12.04:565,12,0	0/0:30,0:30:78.27:0,78,4375	0/0:27,0:27:69.20:0,69,4237	0/0:22,0:22:57.17:0,57,4070	0/0:17,0:17:51.18:0,51,4102	0/0:31,0:31:78.25:0,78,5668	0/0:31,0:31:87.30:0,87,5772	0/0:36,0:36:96.33:0,96,7757	0/0:32,0:32:84.29:0,84,6527	0/0:20,0:20:57.13:0,57,4384	1/1:9,18:27:48.16:2384,48,0	1/1:4,25:29:60.21:3010,60,0	1/1:6,26:32:69.24:3391,69,0	0/0:32,0:32:81.28:0,81,6893	0/0:35,0:35:99:0,102,8317	0/0:28,0:28:75.26:0,75,5807	0/0:15,0:14:39.13:0,39,3177	0/0:23,0:23:54.19:0,54,4269	0/0:25,0:25:69.22:0,69,5580	0/0:32,0:32:87.28:0,87,6228	1/1:5,13:18:30.10:1152,30,0	1/1:5,7:12:15.05:448,15,0	1/1:5,12:17:19.11:912,19,0	0/0:20,0:20:57.20:0,57,4758	0/0:28,0:28:72.25:0,72,5778	0/0:28,0:28:75.23:0,75,4940	0/0:8,0:8:24.08:0,24,1503
chr10	42717900	.	T	TCACACA	3001.86	PASS	AB=1.000;AC=41;AF=0.788;AN=52;BaseQRankSum=1.433;DP=606;FS=0.000;HRun=0;HaplotypeScore=190.2036;InbreedingCoeff=0.2317;MQ=64.05;MQ0=7;MQRankSum=-2.502;QD=6.33;ReadPosRankSum=-0.858;VQSLOD=2.4341;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:22:14.90:157,15,0	0/1:9,0:8:47.99:74,0,48	./.	./.	1/1:23,0:23:3.01:48,3,0	0/0:19,0:19:5.69:0,6,120	0/0:20,0:22:15.86:0,16,272	1/1:22,0:22:9:76,9,0	0/0:22,0:22:16.16:0,16,164	1/1:21,0:21:8.05:147,8,0	1/1:20,0:20:3.01:66,3,0	1/1:17,0:16:2.54:40,3,0	1/1:23,0:23:12.50:230,12,0	1/1:19,0:18:14.73:265,15,0	1/1:24,0:28:2.99:78,3,0	1/1:25,2:30:3.35:55,3,0	0/1:14,0:15:26.90:110,0,27	1/1:14,0:14:6.37:124,6,0	1/1:17,0:17:12.03:211,12,0	0/1:21,0:20:0:0,0,0	0/1:22,0:22:26.77:63,0,27	1/1:30,0:30:6:98,6,0	1/1:21,0:21:2.93:24,3,0	0/1:29,0:29:25.95:143,0,26	1/1:17,0:17:9.02:207,9,0	1/1:19,0:19:25.55:416,26,0	1/1:29,0:27:21.50:441,21,0	1/1:6,0:5:3.01:78,3,0
chr10	42718741	.	TCTC	T	1627.45	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.577;DP=732;FS=5.123;HRun=0;HaplotypeScore=105.2623;InbreedingCoeff=0.9918;MQ=83.60;MQ0=0;MQRankSum=-1.211;QD=32.55;ReadPosRankSum=1.725;VQSLOD=4.0492;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,102,2284	0/0:14,0:14:42.14:0,42,928	0/0:28,0:25:71.26:0,71,1242	0/0:43,0:40:85.44:0,85,1500	1/1:3,22:24:47.80:752,48,0	0/0:30,0:30:81.28:0,81,1805	0/0:20,0:20:57.18:0,57,1169	0/0:37,0:37:99:0,99,1937	0/0:28,0:28:81.28:0,81,1738	0/0:34,0:34:99:0,99,2240	0/0:16,0:16:48.15:0,48,1017	0/0:17,0:17:51.15:0,51,1032	0/0:27,0:27:66.23:0,66,1439	0/0:23,0:23:69.24:0,69,1502	0/0:23,0:23:63.19:0,63,1282	1/1:0,25:25:60.21:997,60,0	0/0:32,0:32:93.29:0,93,2002	0/0:25,0:25:72.19:0,72,1457	0/0:28,0:28:72.22:0,72,1456	0/0:25,0:25:75.26:0,75,1665	0/0:30,0:30:90.31:0,90,1949	0/0:23,0:23:66.23:0,66,1411	0/0:20,0:20:60.18:0,60,1270	0/0:13,0:13:39.13:0,39,884	0/0:31,0:31:87.30:0,87,1969	0/0:39,0:39:99:0,114,2386	0/0:36,0:35:99:0,105,2283	0/0:5,0:5:15.05:0,15,340
chr10	42719193	.	CCTCTCTCT	C	365.76	PASS	AB=0.903;AC=8;AF=0.182;AN=44;BaseQRankSum=3.023;DP=526;FS=1.382;HRun=0;HaplotypeScore=111.1288;InbreedingCoeff=0.4499;MQ=51.74;MQ0=40;MQRankSum=-3.448;QD=3.13;ReadPosRankSum=1.367;VQSLOD=2.1754;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:5.05:0,5,48	0/0:4,0:4:6.02:0,6,152	./.	./.	./.	0/0:10,0:15:9.50:0,10,181	0/0:19,0:20:5.99:0,6,49	0/0:27,0:21:3.90:0,4,46	0/0:9,0:10:12.04:0,12,230	0/0:11,0:11:15.05:0,15,476	./.	1/1:12,1:13:6:98,6,0	0/0:16,0:16:7.46:0,7,43	1/1:3,6:9:5.90:99,6,0	0/0:18,0:20:15.05:0,15,498	0/1:18,0:21:1.55:210,0,2	0/1:24,1:25:1.14:1,0,103	0/0:17,0:17:27.07:0,27,551	0/0:20,0:17:6.91:0,7,150	0/0:20,0:20:9.50:0,10,200	0/0:27,0:27:10.60:0,11,129	./.	./.	1/1:35,12:43:2.86:72,3,0	0/0:11,0:11:9.03:0,9,288	0/0:8,0:9:9.03:0,9,203	0/0:17,0:21:17.55:0,18,359	0/0:10,0:10:4.26:0,4,78
chr10	42719464	.	GC	G	6151.01	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=1.124;DP=597;FS=0.319;HRun=7;HaplotypeScore=73.1702;InbreedingCoeff=0.9866;MQ=91.61;MQ0=0;MQRankSum=0.074;QD=27.34;ReadPosRankSum=5.316;VQSLOD=5.1382;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,31:33:90.20:918,90,0	1/1:0,4:4:12.03:122,12,0	0/0:25,0:25:45.37:0,45,654	0/0:26,0:26:55.92:0,56,650	1/1:2,27:29:75.16:765,75,0	0/0:16,0:16:45.14:0,45,566	0/0:32,0:32:84.21:0,84,1023	0/0:24,0:24:51.14:0,51,618	0/0:10,0:10:27.09:0,27,339	0/0:24,0:24:66.21:0,66,820	0/0:11,0:11:33.11:0,33,415	1/1:1,22:23:56.97:581,57,0	1/1:0,16:16:48.11:490,48,0	1/1:1,17:18:45.10:459,45,0	0/0:25,0:25:75.17:0,75,897	1/1:2,24:26:69.15:704,69,0	0/0:27,0:27:66.21:0,66,830	0/0:21,0:21:60.19:0,60,755	0/0:20,0:20:54.17:0,54,679	0/0:21,0:21:57.17:0,57,701	0/0:21,0:21:60.19:0,60,755	1/1:1,19:20:54.12:551,54,0	1/1:0,18:18:54.12:551,54,0	1/1:2,36:38:99:1010,99,0	0/0:16,0:16:45.14:0,45,566	0/0:23,0:23:69.22:0,69,867	0/0:27,0:27:75.24:0,75,942	0/0:3,0:3:9.03:0,9,113
chr10	42719584	.	CTGTGTGTGTGTG	C	249.99	PASS	AB=0.887;AC=8;AF=0.167;AN=48;BaseQRankSum=3.271;DP=522;FS=7.370;HRun=0;HaplotypeScore=156.4249;InbreedingCoeff=0.3052;MQ=58.85;MQ0=15;MQRankSum=-3.863;QD=3.29;ReadPosRankSum=-1.313;VQSLOD=2.0168;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:12.02:0,12,229	0/0:4,0:4:3.01:0,3,100	./.	0/0:41,0:29:0:0,0,0	0/1:12,0:13:18.93:38,0,19	0/0:24,0:23:24.07:0,24,738	0/0:34,0:34:18.95:0,19,338	0/0:20,0:17:0.47:0,0,1	0/0:12,0:13:6.02:0,6,194	0/0:18,0:18:5.44:0,5,31	./.	1/1:15,4:18:3.28:102,3,0	0/0:11,0:11:0:0,0,0	1/1:16,0:16:2.99:24,3,0	1/1:16,1:17:3.01:102,3,0	0/0:17,0:17:18.06:0,18,395	0/0:22,0:20:6.02:0,6,93	0/0:9,0:9:3.91:0,4,139	0/0:19,0:20:1.39:0,1,45	0/0:14,0:12:6.02:0,6,114	0/0:26,0:25:9.02:0,9,138	./.	0/1:9,2:11:13.10:95,0,13	0/0:30,5:33:0:0,0,0	0/0:13,5:18:0:0,0,0	./.	0/0:18,0:18:6:0,6,66	0/0:10,0:10:9.03:0,9,302
chr10	42721134	.	GCACACACA	G	6723.45	PASS	AB=0.638;AC=29;AF=0.518;AN=56;BaseQRankSum=4.382;DP=664;FS=0.527;HRun=0;HaplotypeScore=197.9777;InbreedingCoeff=0.7797;MQ=59.47;MQ0=2;MQRankSum=-7.774;QD=20.62;ReadPosRankSum=0.976;VQSLOD=4.2156;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:49:20.81:0,21,628	0/0:7,0:13:6.91:0,7,211	0/0:27,0:16:3.01:0,3,108	0/0:21,0:15:3.01:0,3,65	1/1:11,0:22:8.86:168,9,0	0/0:18,0:20:33.10:0,33,1249	0/0:26,0:26:30.09:0,30,1126	1/1:19,0:19:4.19:63,4,0	0/0:20,0:24:45.61:0,46,1633	1/1:11,13:25:36.11:798,36,0	1/1:2,7:10:2.08:198,2,0	0/0:29,0:29:8.99:0,9,226	0/0:23,0:23:18.53:0,19,579	0/0:28,0:28:30.07:0,30,816	1/1:16,9:35:51.17:1151,51,0	1/1:10,0:22:36.12:670,36,0	1/1:7,0:20:18.06:318,18,0	1/1:7,7:16:12.04:264,12,0	1/1:10,5:16:17.98:322,18,0	1/1:6,16:24:33.11:740,33,0	0/1:19,25:44:7.38:78,0,7	0/0:18,0:18:15.05:0,15,374	0/0:27,0:25:18.03:0,18,433	0/0:31,0:30:17.99:0,18,480	1/1:11,16:29:30.10:676,30,0	1/1:9,12:22:26.65:499,27,0	1/1:4,16:20:30.10:761,30,0	1/1:2,0:2:2.94:18,3,0
chr10	42721157	.	C	CACACACACACACAG	4353.81	PASS	AB=1.000;AC=14;AF=0.259;AN=54;BaseQRankSum=-3.267;DP=728;FS=0.585;HRun=0;HaplotypeScore=300.9387;InbreedingCoeff=0.7413;MQ=50.61;MQ0=5;MQRankSum=-1.557;QD=16.43;ReadPosRankSum=1.449;VQSLOD=2.8619;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:46,0:45:99:229,0,156	0/1:11,0:11:36.48:36,0,97	0/0:25,0:8:6.42:0,6,154	0/0:22,0:15:19.30:0,19,269	0/0:14,0:14:11.58:0,12,290	0/0:21,0:21:54:0,54,902	0/0:27,0:27:49.02:0,49,1199	0/0:19,0:19:41.79:0,42,382	0/0:28,0:27:62.45:0,62,1526	0/0:30,0:30:69.02:0,69,1089	0/0:13,0:13:18.02:0,18,304	1/1:10,24:42:11.17:886,11,0	1/1:10,14:29:11.64:902,12,0	1/1:17,22:48:17.81:1166,18,0	0/0:38,0:38:84.48:0,84,1636	0/0:17,0:17:48.04:0,48,1139	0/0:24,0:24:42.03:0,42,897	0/0:19,0:19:35.60:0,36,687	0/0:16,0:16:30.49:0,30,394	0/0:26,0:26:39.82:0,40,793	0/0:49,0:48:32.19:0,32,455	1/1:6,13:29:6.02:408,6,0	1/1:33,0:31:17.58:463,18,0	1/1:27,0:26:17.93:263,18,0	0/0:26,0:26:21.90:0,22,684	0/0:28,0:28:42.06:0,42,703	0/0:20,0:20:39.07:0,39,931	./.
chr10	42722365	.	C	CGTGTGTGT	2684.79	PASS	AB=0.944;AC=29;AF=0.537;AN=54;BaseQRankSum=-3.738;DP=619;FS=1.572;HRun=0;HaplotypeScore=215.6280;InbreedingCoeff=0.2264;MQ=55.26;MQ0=14;MQRankSum=0.034;QD=6.14;ReadPosRankSum=2.821;VQSLOD=2.5873;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:20,7:25:19.21:176,0,19	1/1:8,2:10:2.51:81,3,0	0/0:36,0:24:30.10:0,30,612	0/1:24,0:21:34.97:35,0,372	0/1:28,4:32:5.73:6,0,31	0/0:18,0:20:30.34:0,30,396	0/0:19,0:19:4.01:0,4,89	1/1:32,0:25:21.03:331,21,0	0/0:27,0:27:33.41:0,33,367	1/1:33,0:30:12:220,12,0	0/1:17,0:16:8.28:143,0,8	1/1:20,8:26:0.63:77,1,0	1/1:14,4:18:3.01:81,3,0	1/1:25,0:19:3.01:36,3,0	0/0:14,0:13:2.94:0,3,18	0/1:26,1:26:81.17:159,0,81	0/1:11,0:11:15.71:32,0,16	0/0:15,0:15:5.99:0,6,51	1/1:19,0:18:20.94:302,21,0	0/0:22,0:22:4.26:0,4,12	1/1:23,0:22:4.21:23,4,0	1/1:27,5:31:5.04:139,5,0	1/1:18,0:18:9.03:284,9,0	./.	0/1:32,0:32:6.28:369,0,6	1/1:27,0:24:15.05:360,15,0	0/0:12,0:12:3.01:0,3,40	0/0:5,0:4:3.01:0,3,47
chr10	42722375	.	T	TA	32.38	PASS	AB=0.929;AC=5;AF=0.089;AN=56;BaseQRankSum=3.278;DP=574;FS=1.472;HRun=0;HaplotypeScore=122.8314;InbreedingCoeff=0.0826;MQ=44.93;MQ0=14;MQRankSum=-3.538;QD=0.36;ReadPosRankSum=-3.499;VQSLOD=1.3013;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:22:14.01:0,14,175	0/0:8,0:8:2.53:0,3,41	0/0:33,0:20:60.06:0,60,791	0/0:19,0:15:44.82:0,45,555	0/0:29,0:29:3.87:0,4,79	0/0:23,0:23:47.85:0,48,678	0/0:16,0:16:25.95:0,26,322	0/1:37,4:33:52.02:52,0,913	0/0:32,0:32:48.09:0,48,669	0/0:27,0:24:62.90:0,63,802	0/0:18,0:17:8.17:0,8,90	0/0:21,0:19:9.10:0,9,124	0/0:15,0:14:7.57:0,8,87	0/0:24,0:18:2.52:0,3,24	0/0:14,0:13:2.59:0,3,40	0/0:26,0:25:20.95:0,21,285	0/0:9,0:9:6.01:0,6,68	0/0:13,0:13:24.08:0,24,329	0/1:23,2:22:32.08:32,0,699	0/0:19,1:20:11:0,11,164	0/0:21,0:20:15.08:0,15,205	0/0:30,0:29:18.58:0,19,281	0/0:17,0:17:14.52:0,15,211	0/0:9,0:9:6.96:0,7,84	0/0:27,0:27:12.96:0,13,213	0/1:18,1:16:5.67:6,0,483	0/0:9,0:9:15.05:0,15,206	1/1:4,1:4:3.01:48,3,0
chr10	42722385	.	T	TG	900.08	PASS	AB=0.847;AC=24;AF=0.429;AN=56;BaseQRankSum=1.680;DP=271;FS=6.430;HRun=1;HaplotypeScore=49.1205;InbreedingCoeff=0.0805;MQ=49.29;MQ0=12;MQRankSum=2.558;QD=5.59;ReadPosRankSum=-2.578;VQSLOD=-0.5686;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:5,2:5:6.75:82,0,7	1/1:2,0:2:3.01:46,3,0	0/0:23,0:13:33.03:0,33,404	0/0:10,0:9:3.99:0,4,231	0/0:7,0:7:4.99:0,5,18	0/0:21,0:21:37.49:0,37,343	0/0:10,0:10:8.61:0,9,81	0/1:30,0:23:10.84:11,0,629	0/0:28,0:28:35.88:0,36,271	0/1:3,3:8:37.41:37,0,95	0/1:5,1:5:0.38:71,0,0	1/1:6,1:6:3.01:47,3,0	0/1:5,0:4:16.30:40,0,16	1/1:4,9:7:2.68:36,3,0	0/0:3,2:4:4.99:0,5,18	0/1:9,3:11:28.63:97,0,29	1/1:0,2:2:3.01:38,3,0	0/0:2,0:2:3.01:0,3,40	0/1:18,1:17:42.49:42,0,407	0/1:4,0:6:0:0,0,0	0/1:3,6:8:3.42:14,0,3	0/1:3,1:3:0.37:85,0,0	1/1:1,3:4:2.12:112,2,0	0/1:4,0:4:0:0,0,0	1/1:2,8:10:12.04:157,12,0	0/1:3,7:7:21.39:134,0,21	0/0:1,0:1:3.01:0,3,35	0/0:1,0:1:3.01:0,3,37
chr10	42722462	.	GCA	G	11283.78	PASS	AB=0.691;AC=26;AF=0.464;AN=56;BaseQRankSum=18.772;DP=925;FS=199.934;HRun=0;HaplotypeScore=498.9513;InbreedingCoeff=-0.8616;MQ=40.30;MQ0=0;MQRankSum=-3.378;QD=12.90;ReadPosRankSum=-1.274;VQSLOD=0.6979;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:18,13:31:99:323,0,313	0/1:9,7:16:99:189,0,325	0/0:26,0:16:44.78:0,45,730	0/0:22,1:14:28.78:0,29,641	0/1:19,15:34:99:324,0,320	0/1:17,19:36:99:613,0,511	0/1:20,15:35:99:398,0,394	0/1:22,16:38:99:496,0,1032	0/1:29,30:59:99:540,0,930	0/1:17,41:58:99:985,0,765	0/1:8,18:26:99:376,0,184	0/1:38,20:55:99:515,0,856	0/1:30,14:44:99:407,0,792	0/1:19,22:37:99:466,0,565	0/1:13,25:37:99:521,0,526	0/1:21,25:45:99:841,0,532	0/1:9,2:11:12.55:13,0,378	0/1:8,1:9:15.11:15,0,365	0/1:16,22:38:99:650,0,644	0/1:14,24:38:99:683,0,276	0/1:13,4:16:45.34:45,0,301	0/1:16,18:34:99:451,0,433	0/1:14,9:23:99:213,0,272	0/1:14,5:19:47.24:47,0,86	0/1:12,30:41:99:772,0,445	0/1:15,30:44:99:798,0,692	0/1:13,22:35:99:569,0,262	0/1:3,1:4:33.50:34,0,110
chr10	42722491	.	T	TA	5238.37	PASS	AB=0.997;AC=24;AF=0.429;AN=56;BaseQRankSum=20.731;DP=1104;FS=150.464;HRun=0;HaplotypeScore=548.1403;InbreedingCoeff=-0.4930;MQ=38.99;MQ0=15;MQRankSum=-8.278;QD=5.68;ReadPosRankSum=10.965;VQSLOD=1.4988;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:33,0:32:3.21:120,3,0	0/1:23,0:23:99:150,0,111	0/0:39,0:11:30.05:0,30,345	0/0:38,0:14:31.60:0,32,378	0/1:55,0:55:99:177,0,118	0/1:40,1:41:99:283,0,364	0/1:35,0:35:99:202,0,105	0/0:29,0:28:61.96:0,62,771	0/1:60,0:59:99:255,0,759	0/1:64,0:61:99:167,0,1395	0/1:42,0:42:40.20:232,0,40	0/1:42,1:39:99:150,0,117	0/1:33,0:32:99:112,0,237	0/1:48,0:44:99:454,0,153	0/1:51,0:50:33.30:280,0,33	0/1:51,0:48:99:497,0,172	0/0:21,0:21:11.73:0,12,318	0/0:18,0:18:29.86:0,30,381	0/1:24,0:21:34.11:34,0,592	0/1:58,0:58:88.16:408,0,88	0/0:35,1:35:11.48:0,11,265	1/1:48,0:46:52.08:497,52,0	0/1:33,0:33:30.17:30,0,74	0/1:20,0:20:38.60:67,0,39	0/1:67,1:66:29.94:482,0,30	0/1:47,0:45:99:272,0,889	0/1:41,0:39:99:354,0,241	0/1:5,0:5:16.15:16,0,56
chr10	42722493	.	T	TA	5826.55	PASS	AB=0.996;AC=23;AF=0.411;AN=56;BaseQRankSum=19.711;DP=1108;FS=87.780;HRun=0;HaplotypeScore=546.5610;InbreedingCoeff=-0.5415;MQ=39.05;MQ0=16;MQRankSum=-10.509;QD=6.29;ReadPosRankSum=9.296;VQSLOD=2.0092;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:32:1.86:117,0,2	0/1:23,0:23:99:195,0,131	0/0:40,0:11:29.80:0,30,291	0/0:38,0:14:31.03:0,31,374	0/1:52,2:54:99:234,0,154	0/1:41,0:41:99:314,0,376	0/1:38,0:38:99:248,0,105	0/0:28,0:27:54.43:0,54,726	0/1:60,0:59:99:331,0,726	0/1:64,0:61:99:224,0,1504	0/1:42,0:42:40.66:242,0,41	0/1:43,0:39:99:166,0,130	0/1:32,0:31:99:113,0,252	0/1:48,0:44:99:482,0,153	0/1:50,0:49:39.91:297,0,40	0/1:50,1:48:99:508,0,220	0/0:22,0:22:9.54:0,10,328	0/0:18,0:18:27.92:0,28,424	0/1:26,0:22:51.11:51,0,628	0/1:58,0:58:93.41:468,0,93	0/0:36,0:35:4.86:0,5,282	1/1:47,0:45:9.02:467,9,0	0/1:33,1:34:38.84:39,0,123	0/1:20,0:20:30.64:71,0,31	0/1:68,0:66:46.27:528,0,46	0/1:47,0:45:99:302,0,898	0/1:42,0:40:99:410,0,252	0/1:5,0:5:19.51:20,0,73
chr10	42722495	.	T	TA	4877.50	PASS	AB=0.866;AC=24;AF=0.429;AN=56;BaseQRankSum=17.785;DP=1100;FS=68.702;HRun=0;HaplotypeScore=545.8645;InbreedingCoeff=-0.6409;MQ=37.72;MQ0=16;MQRankSum=-10.715;QD=5.08;ReadPosRankSum=8.368;VQSLOD=2.2747;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:31,1:32:4.74:107,0,5	0/1:20,1:21:99:158,0,149	0/1:35,0:7:11.71:12,0,151	0/0:37,0:14:27.57:0,28,319	0/1:43,9:52:99:143,0,169	0/1:31,10:41:99:264,0,379	0/1:33,5:38:99:218,0,159	0/0:26,0:25:54.17:0,54,666	0/1:49,12:60:99:274,0,734	0/1:53,10:60:99:217,0,1547	0/1:30,12:42:40.52:225,0,41	0/1:40,3:39:99:135,0,145	0/1:28,4:31:95.68:96,0,269	0/1:46,1:43:99:402,0,174	0/1:36,15:50:41.69:231,0,42	0/1:34,18:49:99:364,0,334	0/0:23,0:23:0.34:0,0,345	0/0:18,0:18:29.54:0,30,447	0/1:24,2:22:34.51:35,0,651	0/1:42,17:59:99:424,0,115	0/0:35,0:35:6.31:0,6,286	1/1:45,2:45:4.05:407,4,0	0/1:33,2:35:36.16:36,0,148	0/1:19,1:20:30.44:63,0,30	0/1:51,16:65:51.81:393,0,52	0/1:39,8:45:99:289,0,926	0/1:28,14:40:99:365,0,258	0/1:4,1:5:19.53:20,0,84
chr10	42722497	.	T	TA	5427.12	PASS	AB=0.940;AC=25;AF=0.446;AN=56;BaseQRankSum=17.891;DP=1095;FS=69.879;HRun=0;HaplotypeScore=548.9016;InbreedingCoeff=-0.6265;MQ=37.84;MQ0=16;MQRankSum=-10.173;QD=5.54;ReadPosRankSum=6.346;VQSLOD=2.0998;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:29,4:32:1.92:129,0,2	0/1:16,5:21:99:175,0,127	0/1:36,0:7:6.01:6,0,145	0/0:37,0:14:33.47:0,33,382	0/1:49,3:52:99:207,0,179	0/1:38,3:41:99:319,0,380	0/1:28,9:37:99:249,0,180	0/0:24,1:24:27.47:0,27,612	0/1:61,1:61:99:342,0,685	0/1:60,2:59:99:136,0,1519	0/1:36,5:41:44.23:233,0,44	0/1:41,2:39:99:116,0,137	0/1:33,0:32:99:101,0,278	0/1:34,13:43:99:397,0,199	0/1:51,0:50:41.33:332,0,41	0/1:53,0:50:99:462,0,392	0/1:23,0:23:5.09:5,0,392	0/0:17,1:18:33.57:0,34,492	0/1:25,1:22:7.94:8,0,626	0/1:57,2:59:99:503,0,158	0/0:35,1:35:5.96:0,6,250	1/1:32,12:42:5.09:419,5,0	0/1:34,1:35:38.02:38,0,148	0/1:19,2:21:47.29:73,0,47	0/1:59,8:65:72.60:494,0,73	0/1:44,2:44:99:295,0,881	0/1:41,0:39:99:366,0,254	0/1:5,0:5:23.13:23,0,95
chr10	42723155	.	G	GCT	2104.73	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-9.607;DP=793;FS=9.049;HRun=0;HaplotypeScore=109.2564;InbreedingCoeff=0.8649;MQ=74.27;MQ0=3;MQRankSum=-2.957;QD=30.95;ReadPosRankSum=2.185;VQSLOD=5.8059;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,42:48:99:1745,105,0	1/1:5,14:18:0.89:467,1,0	0/0:29,0:29:39.47:0,39,629	0/0:35,0:34:58.03:0,58,602	0/0:19,0:19:54.16:0,54,668	0/0:24,0:24:69.22:0,69,870	0/0:25,0:25:60.17:0,60,743	0/0:36,0:37:69.02:0,69,802	0/0:23,0:23:63.20:0,63,794	0/0:35,0:35:81.24:0,81,998	0/0:26,0:26:72.21:0,72,883	0/0:22,0:22:60.19:0,60,756	0/0:29,0:29:84.25:0,84,1044	0/0:32,0:32:75.24:0,75,944	0/0:34,0:34:90.24:0,90,1105	0/0:35,0:35:96.29:0,96,1198	0/0:31,0:31:84.22:0,84,1029	0/0:22,0:22:42.13:0,42,530	0/0:29,0:29:69.22:0,69,860	0/0:26,0:26:78.25:0,78,984	0/0:29,0:29:75.24:0,75,946	0/0:26,0:26:66.20:0,66,817	0/0:23,0:23:63.20:0,63,793	0/0:25,0:25:63.18:0,63,779	0/0:29,0:29:57.17:0,57,706	0/0:23,0:23:51.16:0,51,643	0/0:34,0:34:93.28:0,93,1158	0/0:23,0:23:63.20:0,63,789
chr10	42728452	.	T	TG	5660.19	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=12.676;DP=723;FS=1.608;HRun=3;HaplotypeScore=79.1149;InbreedingCoeff=0.9789;MQ=80.86;MQ0=0;MQRankSum=-2.570;QD=35.82;ReadPosRankSum=4.111;VQSLOD=5.4281;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,120,1437	0/0:14,0:14:42.10:0,42,490	0/0:25,0:25:69.10:0,69,773	0/0:17,0:17:36.14:0,36,503	0/0:26,0:26:75.20:0,75,876	0/0:26,0:26:78.19:0,78,899	0/0:24,0:24:69.16:0,69,784	0/0:28,0:28:72.21:0,72,855	0/0:21,0:21:60.17:0,60,708	0/0:29,0:29:84.25:0,84,998	0/0:20,0:20:57.16:0,57,671	1/1:2,28:30:75.25:1047,75,0	1/1:1,33:34:96.32:1344,96,0	1/1:2,24:27:63.21:878,63,0	0/0:34,0:34:99:0,99,1177	0/0:36,0:36:99:0,105,1248	0/0:34,0:34:93.28:0,93,1116	0/0:19,0:19:57.14:0,57,669	0/0:21,0:21:60.18:0,60,720	0/0:23,0:23:66.19:0,66,780	0/0:31,0:31:90.28:0,90,1080	1/1:0,32:32:81.27:1133,81,0	1/1:1,13:14:33.11:461,33,0	1/1:2,19:21:57.19:798,57,0	0/0:19,0:19:48.15:0,48,576	0/0:40,0:40:99:0,120,1403	0/0:34,0:34:99:0,102,1224	0/0:2,0:2:6.02:0,6,72
chr10	42729485	.	TGTGA	T	6584.57	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=13.414;DP=670;FS=0.764;HRun=0;HaplotypeScore=112.6685;InbreedingCoeff=0.9807;MQ=95.61;MQ0=1;MQRankSum=-8.687;QD=47.71;ReadPosRankSum=1.225;VQSLOD=5.5871;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,132,3404	0/0:15,0:15:45.15:0,45,1211	0/0:31,0:31:86.66:0,87,2243	0/0:36,0:35:72.42:0,72,2031	0/0:20,0:20:57.20:0,57,1472	0/0:22,0:22:66.21:0,66,1664	0/0:22,0:22:63.22:0,63,1690	1/1:3,32:35:96.29:1702,96,0	0/0:26,0:26:75.24:0,75,1903	0/0:27,0:27:81.28:0,81,2130	0/0:17,0:17:42.14:0,42,1134	0/0:21,0:21:57.20:0,57,1535	0/0:22,0:22:66.20:0,66,1702	0/0:25,0:25:75.26:0,75,2023	0/0:38,0:38:99:0,111,2906	0/0:27,0:27:75.26:0,75,2021	1/1:1,28:29:72.25:1367,72,0	0/0:24,0:24:72.25:0,72,1943	1/1:0,11:11:33.11:611,33,0	1/1:0,15:15:45.15:854,45,0	1/1:2,14:16:45.15:854,45,0	0/0:20,0:20:57.20:0,57,1515	0/0:20,0:20:54.19:0,54,1415	0/0:28,0:28:81.28:0,81,2178	0/0:17,0:17:51.18:0,51,1374	0/0:30,0:30:87.29:0,87,2267	1/1:1,28:29:57.20:1082,57,0	1/1:1,2:2:6.02:114,6,0
chr10	42730310	.	A	ATT	2668.76	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=7.115;DP=645;FS=0.343;HRun=9;HaplotypeScore=91.7318;InbreedingCoeff=0.9993;MQ=75.61;MQ0=3;MQRankSum=0.724;QD=13.90;ReadPosRankSum=0.021;VQSLOD=1.5787;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:35:98.95:0,99,1022	0/0:10,0:10:27.07:0,27,287	0/0:31,0:25:30.91:0,31,358	0/0:22,0:20:27.80:0,28,365	1/1:4,30:35:93.02:1235,93,0	0/0:22,0:22:60.14:0,60,639	0/0:12,0:12:33.07:0,33,351	0/0:25,0:25:66.14:0,66,702	0/0:14,0:15:41.81:0,42,411	0/0:21,0:21:54.12:0,54,573	0/0:16,0:16:42.10:0,42,447	1/1:3,0:25:50.16:174,50,0	1/1:3,0:23:44.92:154,45,0	1/1:2,0:25:54.96:191,55,0	0/0:21,0:21:57.12:0,57,598	1/1:2,19:21:48.16:739,48,0	0/0:28,0:28:81.20:0,81,862	0/0:21,0:20:51.08:0,51,540	0/0:20,0:20:51.10:0,51,543	0/0:26,0:26:63.10:0,63,669	0/0:27,0:27:69.14:0,69,725	1/1:3,0:25:44.92:154,45,0	1/1:4,0:19:29.53:101,30,0	1/1:2,0:19:37.43:128,37,0	0/0:21,0:21:51.09:0,51,543	0/0:28,0:28:72.13:0,72,758	0/0:36,0:36:90.17:0,90,956	0/0:13,0:13:30.07:0,30,319
chr10	42730903	.	GTAGA	G	585.06	PASS	AB=0.932;AC=6;AF=0.150;AN=40;BaseQRankSum=1.904;DP=436;FS=2.574;HRun=0;HaplotypeScore=97.8588;InbreedingCoeff=0.4236;MQ=28.99;MQ0=111;MQRankSum=3.875;QD=7.70;ReadPosRankSum=1.625;VQSLOD=2.1338;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/0:7,0:9:2.60:0,3,10	./.	./.	0/1:26,1:22:0.63:1,0,925	1/1:5,11:12:27.09:412,27,0	0/1:16,0:9:0:0,0,0	0/0:21,0:10:2.49:0,2,6	0/0:22,0:21:33.11:0,33,741	0/0:22,0:19:24.08:0,24,441	0/0:17,0:13:0:0,0,0	./.	./.	0/0:16,0:11:0:0,0,0	0/0:17,0:15:3:0,3,27	1/1:8,7:14:18.06:275,18,0	0/0:14,0:6:3.01:0,3,39	0/0:10,0:4:0.47:0,0,1	0/0:15,0:14:3.01:0,3,59	0/0:25,0:22:3.01:0,3,56	./.	./.	0/0:15,0:14:2.60:0,3,10	./.	0/0:27,0:23:0:0,0,0	0/0:14,0:10:15.05:0,15,275	0/0:16,0:13:12.04:0,12,191	0/0:7,0:5:3.01:0,3,38
chr10	42732265	.	G	GTAGA	821.59	PASS	AB=1.000;AC=19;AF=0.731;AN=26;BaseQRankSum=-0.789;DP=272;FS=1.973;HRun=0;HaplotypeScore=34.3796;InbreedingCoeff=-0.2195;MQ=21.29;MQ0=176;MQRankSum=0.319;QD=5.79;ReadPosRankSum=1.393;VQSLOD=1.2433;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:6,11:17:21.07:465,21,0	./.	./.	./.	./.	./.	./.	./.	./.	1/1:16,0:6:5.42:59,5,0	1/1:15,0:7:2.36:18,2,0	./.	./.	./.	0/0:13,0:7:1.83:0,2,18	./.	./.	0/1:7,0:4:13.97:19,0,14	./.	0/1:15,0:6:13:13,0,14	1/1:7,0:4:2.96:19,3,0	1/1:2,3:3:6.02:138,6,0	./.	1/1:6,0:1:3.01:35,3,0	0/1:14,0:5:11.96:68,0,12	0/1:17,0:9:18.54:19,0,36	0/1:14,0:9:10.51:11,0,30	1/1:9,0:3:1.31:59,1,0
chr10	42733092	.	C	CTTT	4516.10	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=11.872;DP=644;FS=81.977;HRun=1;HaplotypeScore=128.1553;InbreedingCoeff=0.9979;MQ=83.92;MQ0=0;MQRankSum=-12.005;QD=59.42;ReadPosRankSum=1.136;VQSLOD=0.9558;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:75,0:75:99:0,208,3750	0/0:8,0:8:21.07:0,21,348	0/0:29,0:29:79.16:0,79,1312	0/0:25,0:25:75.06:0,75,1248	0/0:22,0:22:66.23:0,66,1226	0/0:21,0:21:57.15:0,57,1000	0/0:27,0:27:78.27:0,78,1452	0/0:29,0:29:78.26:0,78,1422	0/0:23,0:23:69.22:0,69,1250	1/1:1,14:15:42.14:981,42,0	1/1:1,13:14:39.13:875,39,0	0/0:21,0:21:54.17:0,54,971	0/0:15,0:15:45.15:0,45,837	0/0:24,0:24:69.13:0,69,1188	1/1:0,17:17:39.13:898,39,0	0/0:27,0:27:75.26:0,75,1387	0/0:34,0:33:99:0,102,1884	1/1:0,6:7:21.07:468,21,0	0/0:22,0:22:63.21:0,63,1145	0/0:21,0:21:60.21:0,60,1113	0/0:31,0:31:90.24:0,90,1638	0/0:17,0:17:48.16:0,48,885	0/0:28,0:28:81.26:0,81,1471	0/0:44,0:44:99:0,129,2330	1/1:0,10:12:30.10:692,30,0	1/1:1,9:10:27.09:603,27,0	0/0:15,0:15:45.05:0,45,796	0/0:10,0:10:30.10:0,30,559
chr10	42734961	.	A	ACCTT	15566.48	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-12.406;DP=596;FS=4.279;HRun=0;HaplotypeScore=92.5257;InbreedingCoeff=0.9996;MQ=76.11;MQ0=0;MQRankSum=-7.613;QD=69.18;ReadPosRankSum=1.678;VQSLOD=7.0585;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,18:20:48.12:1232,48,0	1/1:1,7:9:24.08:671,24,0	0/0:15,0:15:38.93:0,39,747	0/0:17,0:17:42.12:0,42,755	1/1:8,27:36:81.14:1999,81,0	0/0:25,0:25:75.24:0,75,1453	0/0:22,0:22:57.20:0,57,1139	0/0:29,0:29:84.26:0,84,1547	0/0:19,0:19:54.19:0,54,1079	0/0:25,0:25:72.22:0,72,1335	0/0:22,0:22:63.22:0,63,1258	1/1:4,21:25:69.24:1871,69,0	1/1:5,16:24:66.23:1743,66,0	1/1:0,12:13:36.12:1007,36,0	0/0:18,0:18:51.15:0,51,949	1/1:4,14:18:45.15:1215,45,0	0/0:17,0:17:51.17:0,51,1008	0/0:16,0:16:45.12:0,45,859	0/0:20,0:20:60.19:0,60,1140	0/0:19,0:19:57.20:0,57,1120	0/0:14,0:14:42.12:0,42,769	1/1:2,21:25:72.16:1885,72,0	1/1:4,28:32:87.73:2265,88,0	1/1:2,20:22:60.14:1678,60,0	0/0:25,0:25:75.26:0,75,1491	0/0:25,0:25:75.26:0,75,1492	0/0:33,0:33:96.33:0,96,1916	0/0:10,0:10:30.08:0,30,562
chr10	42735303	.	TAA	T	4343.01	PASS	AB=0.882;AC=21;AF=0.375;AN=56;BaseQRankSum=-0.750;DP=577;FS=3.660;HRun=13;HaplotypeScore=99.8469;InbreedingCoeff=0.9090;MQ=69.20;MQ0=2;MQRankSum=-0.339;QD=18.32;ReadPosRankSum=7.529;VQSLOD=4.0227;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,0:17:27.42:119,27,0	1/1:1,0:14:31.13:133,31,0	0/1:13,1:10:17.20:17,0,123	0/0:9,0:7:6:0,6,51	1/1:6,27:33:65.79:618,66,0	0/0:22,1:23:30.96:0,31,677	0/0:17,0:18:38.62:0,39,529	0/0:8,0:28:60.11:0,60,605	0/0:17,0:17:48.12:0,48,638	0/0:7,0:13:24.05:0,24,259	0/0:5,0:25:60.12:0,60,616	1/1:3,26:31:65.56:672,66,0	1/1:1,25:26:75.12:727,75,0	1/1:5,19:24:48.53:466,49,0	0/0:4,0:22:48.07:0,48,457	1/1:3,17:22:32.50:465,32,0	0/0:7,0:25:57.08:0,57,590	0/0:1,0:13:27.01:0,27,249	0/0:5,0:16:42.04:0,42,405	0/0:3,0:22:60.08:0,60,594	0/0:3,0:19:33.06:0,33,336	1/1:5,7:14:26.50:227,26,0	1/1:2,15:19:45.27:420,45,0	1/1:3,17:22:38.89:478,39,0	0/0:5,0:24:45.08:0,45,444	0/0:5,0:27:69.10:0,69,726	0/0:4,0:29:63.11:0,63,635	0/0:3,0:9:24.02:0,24,230
chr10	42736651	.	G	GT	5432.73	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-6.055;DP=663;FS=11.292;HRun=2;HaplotypeScore=114.3596;InbreedingCoeff=0.9936;MQ=86.58;MQ0=0;MQRankSum=-3.721;QD=39.37;ReadPosRankSum=-2.235;VQSLOD=2.5454;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:84.24:0,84,1026	0/0:10,0:10:30.09:0,30,372	0/0:22,0:22:57.16:0,57,684	0/0:26,0:26:69.20:0,69,836	0/0:31,0:31:90.28:0,90,1116	0/0:17,0:17:48.15:0,48,595	0/0:23,0:23:60.19:0,60,744	1/1:3,38:41:99:1656,120,0	0/0:21,0:21:63.20:0,63,781	0/0:23,0:23:66.21:0,66,818	0/0:33,0:33:99:0,99,1226	0/0:21,0:21:60.18:0,60,730	0/0:27,0:27:66.18:0,66,796	0/0:17,0:17:48.13:0,48,581	0/0:27,0:27:78.23:0,78,954	0/0:27,0:27:78.24:0,78,967	0/0:24,0:24:66.19:0,66,805	0/0:24,0:24:63.20:0,63,781	1/1:2,12:14:42.12:584,42,0	1/1:2,33:35:99:1379,99,0	1/1:1,13:14:36.06:518,36,0	0/0:20,0:20:60.17:0,60,720	0/0:25,0:25:75.24:0,75,929	0/0:18,0:18:54.15:0,54,656	0/0:30,0:30:81.25:0,81,1004	0/0:29,0:29:84.26:0,84,1041	1/1:4,26:29:78.26:1123,78,0	1/1:0,4:4:12.04:173,12,0
chr10	42737370	.	TGCTA	T	26803.77	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=1.897;DP=671;FS=1.970;HRun=0;HaplotypeScore=130.0108;InbreedingCoeff=0.9559;MQ=85.67;MQ0=0;MQRankSum=-11.001;QD=43.09;ReadPosRankSum=8.330;VQSLOD=5.0680;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:6,43:49:99:1844,103,0	1/1:1,3:4:9.03:164,9,0	0/0:23,0:23:56.97:0,57,1223	0/0:26,0:26:75.17:0,75,1527	1/1:4,18:22:42.14:755,42,0	1/1:2,24:26:57.20:1034,57,0	1/1:4,24:28:57.20:1034,57,0	1/1:5,26:31:78.25:1356,78,0	1/1:3,17:20:45.15:818,45,0	1/1:4,25:29:78.23:1385,78,0	1/1:1,19:20:46.04:812,46,0	1/1:3,19:22:57.20:1036,57,0	1/1:1,20:21:51.17:926,51,0	1/1:3,32:35:75.26:1359,75,0	1/1:1,15:16:39.13:709,39,0	1/1:1,24:25:63.22:1146,63,0	1/1:2,39:41:87.30:1582,87,0	1/1:4,19:23:54.19:982,54,0	1/1:2,15:17:45.15:818,45,0	1/1:1,21:22:57.20:1037,57,0	1/1:0,22:22:50.92:924,51,0	1/1:4,21:25:63.22:1143,63,0	1/1:0,23:23:63.22:1143,63,0	1/1:4,19:23:51.17:928,51,0	1/1:2,24:26:72.25:1307,72,0	1/1:0,28:28:78.27:1417,78,0	1/1:1,19:20:51.17:927,51,0	1/1:0,4:4:12.04:218,12,0
chr10	42737563	.	C	CCAGGCTGAACA	5179.79	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-3.972;DP=676;FS=1.397;HRun=0;HaplotypeScore=220.9735;InbreedingCoeff=0.9966;MQ=78.67;MQ0=0;MQRankSum=-9.303;QD=105.71;ReadPosRankSum=0.177;VQSLOD=5.0168;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:14,16:37:69.71:3478,70,0	1/1:4,8:12:33.11:1702,33,0	0/0:19,0:19:42.11:0,42,1115	0/0:23,0:23:66.14:0,66,1846	0/0:23,0:23:66.23:0,66,2269	0/0:21,0:21:63.20:0,63,2100	0/0:30,0:30:75.25:0,75,2419	0/0:24,0:24:66.19:0,66,1947	0/0:20,0:20:54.19:0,54,1889	0/0:27,0:27:75.26:0,75,2528	0/0:12,0:12:33.07:0,33,1010	0/0:28,0:28:69.20:0,69,2184	0/0:27,0:27:75.26:0,75,2404	0/0:37,0:37:99:0,111,3603	0/0:28,0:28:78.25:0,78,2633	0/0:18,0:18:51.18:0,51,1753	0/0:36,0:36:90.28:0,90,3023	0/0:20,0:20:51.18:0,51,1764	0/0:11,0:11:24.08:0,24,839	0/0:25,0:25:69.24:0,69,2308	0/0:45,0:45:99:0,126,4175	0/0:20,0:20:54.19:0,54,1860	0/0:15,0:15:45.15:0,45,1558	0/0:37,0:37:99:0,102,3483	0/0:22,0:22:60.16:0,60,1982	0/0:31,0:31:84.28:0,84,2762	0/0:21,0:21:63.22:0,63,2179	0/0:7,0:7:21.06:0,21,655
chr10	42737900	.	GCCC	G	6367.38	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-0.109;DP=575;FS=2.472;HRun=11;HaplotypeScore=132.8034;InbreedingCoeff=0.9695;MQ=66.25;MQ0=0;MQRankSum=-3.798;QD=27.93;ReadPosRankSum=3.989;VQSLOD=3.4059;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:21:29.92:0,30,248	0/0:5,0:9:17.95:0,18,160	0/0:18,0:16:26.75:0,27,475	0/0:32,0:32:37.81:0,38,835	1/1:3,10:13:18.01:236,18,0	1/1:4,14:18:39.05:501,39,0	1/1:4,18:22:41.97:552,42,0	0/0:8,0:26:23.34:0,23,68	1/1:6,18:24:54.03:674,54,0	1/1:6,19:25:63.65:811,64,0	1/1:4,7:11:18.01:205,18,0	0/0:4,0:28:58.06:0,58,480	0/0:3,0:21:41.87:0,42,351	0/0:4,0:19:40.06:0,40,296	1/1:4,20:24:54.06:709,54,0	1/1:5,21:26:45.13:591,45,0	0/0:4,0:26:23.67:0,24,51	1/1:4,19:23:51.10:670,51,0	0/0:2,0:12:14.68:0,15,34	0/0:2,0:14:16:0,16,49	0/0:6,0:31:26.67:0,27,75	0/0:6,0:18:32.44:0,32,259	0/0:4,0:15:35.87:0,36,279	0/0:8,0:32:59.70:0,60,486	1/1:3,14:17:42.11:551,42,0	1/1:1,24:24:66.21:867,66,0	0/0:3,0:18:16.20:0,16,35	0/0:2,0:5:3.74:0,4,8
chr10	42737963	.	CG	C	5337.15	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=7.715;DP=527;FS=17.223;HRun=3;HaplotypeScore=74.1241;InbreedingCoeff=0.9687;MQ=59.22;MQ0=3;MQRankSum=-1.788;QD=29.65;ReadPosRankSum=1.091;VQSLOD=3.1582;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:66.19:0,66,911	0/0:5,0:5:15.05:0,15,199	0/0:24,0:18:45.13:0,45,582	0/0:29,0:24:54.18:0,54,769	0/0:14,0:14:33.11:0,33,472	1/1:3,12:15:42.12:506,42,0	1/1:6,15:21:54.12:645,54,0	0/0:19,0:19:48.13:0,48,627	1/1:2,16:18:36.11:445,36,0	1/1:1,22:22:57.18:706,57,0	1/1:1,13:13:24.07:297,24,0	0/0:23,0:23:57.17:0,57,783	0/0:18,0:18:54.18:0,54,776	0/0:20,0:20:60.20:0,60,864	1/1:3,23:26:57.16:693,57,0	0/0:24,1:25:32.02:0,32,893	0/0:25,0:25:63.21:0,63,906	1/1:1,23:24:66.21:818,66,0	0/0:16,0:15:36.11:0,36,500	0/0:9,0:9:20.99:0,21,240	0/0:35,0:35:93.31:0,93,1338	0/0:7,0:7:15.05:0,15,215	0/0:4,0:4:9.02:0,9,111	0/0:27,0:27:78.25:0,78,1105	1/1:1,15:16:33.10:409,33,0	1/1:1,22:22:66.21:818,66,0	0/0:19,0:18:54.18:0,54,773	0/0:3,0:3:6.02:0,6,86
chr10	42738418	.	A	AT	4022.04	PASS	AB=0.752;AC=18;AF=0.321;AN=56;BaseQRankSum=-10.223;DP=618;FS=1.681;HRun=11;HaplotypeScore=59.8280;InbreedingCoeff=0.8185;MQ=59.87;MQ0=5;MQRankSum=-0.624;QD=15.35;ReadPosRankSum=-1.793;VQSLOD=3.6543;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,37:44:81.16:822,81,0	1/1:0,1:1:3.01:30,3,0	0/0:15,0:9:5.49:0,5,124	0/0:12,0:8:17.45:0,17,123	0/0:21,0:20:21.96:0,22,273	0/0:19,0:19:35.81:0,36,279	0/0:17,0:18:37.86:0,38,284	1/1:16,23:31:27.77:435,28,0	0/0:20,0:21:49.80:0,50,375	0/0:22,0:22:41.79:0,42,324	0/1:25,2:28:2.11:2,0,337	0/0:22,0:23:46.79:0,47,354	0/0:19,0:20:46.83:0,47,354	0/0:16,0:16:32.86:0,33,255	0/0:19,0:19:32.82:0,33,255	0/0:12,0:12:32.87:0,33,255	1/1:5,32:37:48.91:676,49,0	0/0:29,0:29:62.72:0,63,487	1/1:3,17:20:44.88:411,45,0	1/1:5,25:30:42.77:584,43,0	0/1:5,15:20:16.42:212,0,16	0/0:17,0:18:46.85:0,47,354	0/0:20,0:20:53.78:0,54,418	0/0:27,0:27:74.67:0,75,577	0/0:21,0:21:38.75:0,39,302	0/0:22,0:22:47.80:0,48,372	1/1:5,30:35:45.90:647,46,0	1/1:1,7:8:21:203,21,0
chr10	42739182	.	TCACA	T	4004.41	PASS	AB=0.621;AC=22;AF=0.393;AN=56;BaseQRankSum=2.052;DP=557;FS=12.599;HRun=0;HaplotypeScore=138.9720;InbreedingCoeff=0.7594;MQ=65.25;MQ0=4;MQRankSum=1.206;QD=18.20;ReadPosRankSum=4.095;VQSLOD=2.8267;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:60.01:0,60,1029	0/1:6,0:12:11.23:11,0,45	0/0:27,0:15:3.01:0,3,41	0/0:26,0:17:3.01:0,3,42	1/1:7,0:20:18.02:167,18,0	1/1:7,11:19:14.54:370,15,0	1/1:7,6:13:9.01:120,9,0	0/0:17,0:18:9:0,9,135	1/1:6,16:22:45.13:693,45,0	1/1:9,11:20:33.11:523,33,0	1/1:9,7:16:9.03:143,9,0	0/0:12,0:24:20.65:0,21,277	0/0:13,0:22:8.31:0,8,311	0/0:7,0:13:9.03:0,9,157	1/1:10,11:21:27.09:430,27,0	0/1:6,0:23:2.25:286,0,2	0/0:13,0:23:23.53:0,24,340	1/1:4,5:10:17.51:255,18,0	0/0:12,0:13:18.68:0,19,349	0/0:19,0:19:39.13:0,39,825	0/0:21,1:23:41.86:0,42,804	0/0:14,0:30:18.94:0,19,176	0/0:12,0:16:9.03:0,9,136	0/0:14,0:27:11.88:0,12,140	1/1:12,9:21:33.96:538,34,0	1/1:12,10:22:33.09:468,33,0	0/0:19,0:22:48.86:0,49,958	0/0:5,0:5:6.02:0,6,110
chr10	42742031	.	AT	A	4572.85	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=14.836;DP=730;FS=1.159;HRun=3;HaplotypeScore=75.4090;InbreedingCoeff=0.9995;MQ=87.03;MQ0=0;MQRankSum=-0.260;QD=34.64;ReadPosRankSum=2.941;VQSLOD=5.5367;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,144,2025	0/0:10,0:10:30.10:0,30,432	0/0:23,0:23:62.92:0,63,842	0/0:29,0:29:81.13:0,81,1114	0/0:30,0:30:90.28:0,90,1257	0/0:20,0:20:57.19:0,57,821	0/0:25,0:25:75.22:0,75,1041	0/0:28,0:28:81.25:0,81,1118	0/0:28,0:28:78.23:0,78,1084	0/0:25,0:25:72.23:0,72,1020	0/0:26,0:26:75.24:0,75,1061	1/1:0,15:15:42.13:521,42,0	1/1:1,16:17:48.15:595,48,0	1/1:0,25:25:69.22:855,69,0	0/0:27,0:27:81.27:0,81,1166	0/0:26,0:26:75.23:0,75,1044	0/0:36,0:36:99:0,102,1450	0/0:27,0:27:81.20:0,81,1141	0/0:29,0:29:81.26:0,81,1150	0/0:28,0:28:84.28:0,84,1204	0/0:40,0:40:99:0,111,1538	1/1:0,22:22:60.19:744,60,0	1/1:0,29:29:84.26:1041,84,0	1/1:1,23:24:66.21:818,66,0	0/0:21,0:21:63.20:0,63,891	0/0:29,0:29:87.29:0,87,1253	0/0:32,0:32:96.32:0,96,1382	0/0:8,0:8:24.08:0,24,345
chr10	42742540	.	T	TC	2337.42	PASS	AB=0.616;AC=11;AF=0.196;AN=56;BaseQRankSum=-7.889;DP=620;FS=7.954;HRun=9;HaplotypeScore=68.1524;InbreedingCoeff=0.3717;MQ=80.52;MQ0=0;MQRankSum=-2.527;QD=14.17;ReadPosRankSum=0.422;VQSLOD=3.2688;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:7,20:27:16.01:296,0,16	0/0:12,0:13:35.02:0,35,290	0/0:28,0:26:12.13:0,12,215	0/0:29,0:29:21.23:0,21,273	0/0:25,0:25:65.92:0,66,559	0/0:29,0:29:48.64:0,49,615	0/0:20,0:20:50.95:0,51,436	0/1:13,7:19:28.07:164,0,28	0/0:17,0:17:35.96:0,36,312	0/0:23,0:23:53.95:0,54,463	0/0:19,0:19:47.99:0,48,416	0/0:28,0:28:71.98:0,72,624	0/0:20,0:20:53.96:0,54,465	0/0:20,0:21:56.01:0,56,472	0/0:26,0:26:62.95:0,63,543	0/0:21,0:21:56.20:0,56,475	1/1:5,15:19:12.92:372,13,0	0/0:14,0:14:35.99:0,36,311	1/1:8,6:14:17.73:188,18,0	0/1:10,20:30:66.82:464,0,67	0/1:6,17:23:27.02:402,0,27	0/0:15,0:16:34.99:0,35,287	0/0:21,0:21:38.24:0,38,459	0/0:40,0:41:99:0,101,844	0/0:18,0:18:41.98:0,42,364	0/0:25,1:26:38.78:0,39,561	0/1:9,21:30:32.06:576,0,32	1/1:0,1:1:3.01:33,3,0
chr10	42742892	.	C	CATGT	2756.77	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-8.035;DP=668;FS=9.985;HRun=0;HaplotypeScore=120.9792;InbreedingCoeff=0.9905;MQ=89.12;MQ0=0;MQRankSum=-3.227;QD=53.01;ReadPosRankSum=3.010;VQSLOD=4.4325;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:84.22:0,84,1470	0/0:8,0:8:24.08:0,24,448	0/0:25,0:26:69.21:0,69,1224	0/0:23,0:23:55.86:0,56,896	1/1:3,29:32:60.21:1600,60,0	0/0:26,0:26:69.24:0,69,1288	0/0:27,0:27:81.26:0,81,1481	0/0:34,0:34:93.30:0,93,1649	0/0:25,0:25:69.24:0,69,1279	0/0:23,0:23:69.24:0,69,1271	0/0:31,0:31:84.29:0,84,1558	0/0:19,0:19:54.16:0,54,975	0/0:19,0:19:48.16:0,48,896	0/0:19,0:19:54.18:0,54,995	0/0:28,0:28:81.26:0,81,1469	1/1:4,15:20:48.16:1278,48,0	0/0:30,0:30:87.27:0,87,1569	0/0:15,0:15:38.80:0,39,683	0/0:27,0:27:75.26:0,75,1377	0/0:30,0:30:81.26:0,81,1478	0/0:37,0:37:99:0,102,1859	0/0:14,0:14:39.13:0,39,711	0/0:23,0:22:66.23:0,66,1232	0/0:6,0:6:15.05:0,15,279	0/0:31,0:31:84.29:0,84,1558	0/0:27,0:27:78.27:0,78,1451	0/0:27,0:27:78.26:0,78,1425	0/0:10,0:10:30.09:0,30,528
chr10	42743858	.	AC	A	2798.95	PASS	AB=0.794;AC=24;AF=0.444;AN=54;BaseQRankSum=7.068;DP=577;FS=2.008;HRun=2;HaplotypeScore=126.9581;InbreedingCoeff=0.3902;MQ=41.81;MQ0=43;MQRankSum=-4.968;QD=9.00;ReadPosRankSum=-1.338;VQSLOD=0.8827;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:29,8:34:38.26:431,38,0	1/1:1,4:5:8.63:101,9,0	0/0:34,0:9:23.99:0,24,273	0/0:36,0:7:21.03:0,21,228	./.	1/1:3,13:14:17.93:228,18,0	1/1:11,22:26:30.81:369,31,0	0/0:21,0:17:23.91:0,24,581	0/1:2,14:15:5.93:273,0,6	0/1:12,9:19:99:365,0,128	1/1:5,13:14:3:39,3,0	0/1:18,2:19:45.66:46,0,246	0/1:12,0:12:6.67:7,0,204	0/0:17,0:15:22.20:0,22,275	1/1:4,18:20:23.90:290,24,0	0/1:16,9:25:99:157,0,110	0/0:27,1:27:21.87:0,22,505	1/1:6,8:14:13.43:295,13,0	0/0:15,0:12:32.46:0,32,366	0/0:17,0:16:34.32:0,34,329	0/0:46,1:42:82.60:0,83,946	0/0:15,0:15:30.03:0,30,354	0/0:10,2:12:19.88:0,20,230	0/1:32,2:30:22.60:23,0,496	1/1:1,12:13:13.54:152,14,0	0/1:6,6:8:39.88:208,0,40	0/0:18,0:16:34.65:0,35,370	0/1:11,2:12:8.18:8,0,233
chr10	42743859	.	CCA	C	642.92	PASS	AB=0.994;AC=22;AF=0.440;AN=50;BaseQRankSum=-1.860;DP=588;FS=0.934;HRun=0;HaplotypeScore=143.1357;InbreedingCoeff=0.4216;MQ=41.90;MQ0=44;MQRankSum=2.200;QD=2.26;ReadPosRankSum=0.648;VQSLOD=2.2264;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:34:1.07:0,1,3	1/1:5,0:5:1.82:5,2,0	./.	./.	./.	0/0:18,0:16:2.98:0,3,22	0/1:31,0:26:0:0,0,0	0/0:20,0:17:0.47:0,0,1	0/1:17,0:16:2.04:2,0,20	0/0:20,0:19:7.47:0,7,43	0/1:18,0:14:0.01:1,0,0	0/0:14,0:19:13.16:0,13,104	0/0:7,0:13:11.67:0,12,87	0/0:14,0:15:11.99:0,12,103	0/1:21,0:21:2.82:3,0,8	0/1:24,0:25:63.38:63,0,145	1/1:15,10:27:20.55:171,21,0	0/1:12,0:14:6.16:6,0,13	1/1:15,0:12:3.01:32,3,0	1/1:12,4:16:14.83:143,15,0	1/1:47,0:41:20.84:214,21,0	0/0:11,0:18:6.69:0,7,104	0/0:11,0:13:8.57:0,9,63	0/0:25,0:33:8.09:0,8,73	1/1:12,0:12:2.36:9,2,0	0/0:11,0:8:1.55:0,2,4	1/1:11,6:17:8.53:77,9,0	1/1:10,3:12:5.04:63,5,0
chr10	42743868	.	CA	C	1376.64	PASS	AB=0.774;AC=15;AF=0.268;AN=56;BaseQRankSum=8.402;DP=579;FS=1.070;HRun=1;HaplotypeScore=133.9677;InbreedingCoeff=0.5621;MQ=40.15;MQ0=45;MQRankSum=-6.541;QD=7.52;ReadPosRankSum=-2.597;VQSLOD=-0.1540;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:35:26.65:0,27,236	0/0:5,0:5:8.55:0,9,64	0/0:29,0:8:18.01:0,18,226	0/0:38,0:8:24.08:0,24,300	0/0:7,0:6:0.47:0,0,1	1/1:9,7:15:13.62:85,14,0	1/1:18,13:25:28.39:242,28,0	0/0:24,0:20:59.53:0,60,687	1/1:5,10:15:10.83:234,11,0	0/1:16,6:20:99:266,0,177	0/1:9,4:11:0.01:1,0,0	0/0:19,0:18:27.08:0,27,352	0/0:17,0:16:25.43:0,25,297	0/0:18,0:16:29.21:0,29,343	1/1:5,14:19:29.15:246,29,0	0/1:22,1:24:19.21:19,0,364	0/0:28,0:27:47.40:0,47,453	0/1:9,5:16:85.58:157,0,86	0/0:13,0:10:29.29:0,29,329	0/0:17,0:16:31.62:0,32,268	0/0:45,0:39:79.79:0,80,840	0/0:19,0:19:30.77:0,31,427	0/0:12,0:12:16.89:0,17,194	0/0:37,0:33:51.16:0,51,662	1/1:3,7:11:13.16:102,13,0	0/1:8,4:8:43.48:201,0,43	0/0:16,0:14:27.20:0,27,271	0/0:13,0:12:24.63:0,25,248
chr10	42743869	.	A	AC	1098.60	PASS	AB=0.934;AC=14;AF=0.250;AN=56;BaseQRankSum=8.469;DP=578;FS=3.116;HRun=1;HaplotypeScore=135.4508;InbreedingCoeff=0.6185;MQ=40.40;MQ0=46;MQRankSum=-6.842;QD=6.87;ReadPosRankSum=-2.541;VQSLOD=-0.0767;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:34:48.68:0,49,479	0/0:5,0:5:9.49:0,9,98	0/0:30,0:9:13.29:0,13,187	0/0:36,0:6:18.06:0,18,228	0/0:8,0:7:0.47:0,0,1	1/1:14,1:14:13.05:91,13,0	1/1:32,0:26:25.93:190,26,0	0/0:24,0:20:58.55:0,59,681	1/1:15,1:15:28.27:257,28,0	0/1:20,1:19:99:184,0,177	0/1:15,0:11:0.41:0,0,0	0/0:19,0:18:24.08:0,24,238	0/0:17,0:16:21.89:0,22,210	0/0:18,0:16:25.19:0,25,240	1/1:19,1:19:28.06:204,28,0	0/0:24,0:24:6.54:0,7,357	0/0:28,0:27:50.49:0,50,480	0/1:13,5:18:88.35:133,0,88	0/0:12,0:10:30.03:0,30,356	0/0:17,0:16:36.17:0,36,323	0/0:46,0:40:84:0,84,853	0/0:19,0:19:31.64:0,32,368	0/0:12,0:12:9.54:0,10,133	0/0:37,0:33:50.13:0,50,594	1/1:11,0:11:12.49:69,12,0	0/1:12,0:8:51.18:146,0,51	0/0:16,0:14:30.31:0,30,305	0/0:13,0:12:25.30:0,25,267
chr10	42743870	.	CA	C	495.12	PASS	AB=0.981;AC=12;AF=0.214;AN=56;BaseQRankSum=7.825;DP=584;FS=2.746;HRun=1;HaplotypeScore=137.8455;InbreedingCoeff=0.1323;MQ=40.42;MQ0=49;MQRankSum=-5.043;QD=2.68;ReadPosRankSum=-0.276;VQSLOD=-0.4007;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:34:48.75:0,49,473	0/0:5,0:5:8.96:0,9,87	0/0:31,0:9:16.30:0,16,223	0/0:38,0:6:18.06:0,18,228	0/0:7,0:7:0.47:0,0,1	0/1:15,0:14:5.96:16,0,6	0/1:31,1:26:44.48:44,0,48	0/0:24,0:20:59:0,59,733	1/1:16,1:16:4.03:100,4,0	0/1:21,0:19:99:174,0,214	1/1:13,1:11:2.96:20,3,0	0/0:20,0:19:27.08:0,27,352	0/0:17,0:16:25.43:0,25,297	0/0:19,0:16:29.22:0,29,356	0/1:20,1:20:44.37:44,0,48	0/1:24,0:24:5.72:6,0,366	0/0:27,0:26:42.33:0,42,399	0/1:18,0:18:99:140,0,171	0/0:12,0:10:29.31:0,29,345	0/0:19,0:18:34.66:0,35,322	0/0:45,0:39:79.72:0,80,800	0/0:19,0:19:30.76:0,31,414	0/0:12,0:12:16.89:0,17,194	0/0:37,0:33:51.14:0,51,640	0/1:11,0:11:6.52:14,0,7	0/1:11,1:8:69.64:82,0,70	0/0:16,0:14:27.22:0,27,285	0/0:13,0:12:24.22:0,24,246
chr10	42744391	.	C	CCCCTATCT	11988.20	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-7.200;DP=524;FS=57.826;HRun=0;HaplotypeScore=126.0742;InbreedingCoeff=0.9557;MQ=78.48;MQ0=0;MQRankSum=-11.635;QD=73.10;ReadPosRankSum=-2.399;VQSLOD=2.3937;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,18:27:48.12:1860,48,0	1/1:3,3:7:15.05:610,15,0	0/0:14,0:14:36.12:0,36,944	0/0:27,0:27:54.16:0,54,1207	1/1:2,6:10:15.01:534,15,0	0/0:19,0:18:51.17:0,51,1283	0/0:16,0:16:36.12:0,36,933	1/1:11,16:27:54.16:2079,54,0	0/0:28,0:28:75.26:0,75,1948	0/0:26,0:26:66.21:0,66,1611	0/0:16,0:16:48.16:0,48,1294	0/0:26,0:26:75.25:0,75,1923	0/0:25,0:25:75.26:0,75,1993	0/0:26,0:26:66.21:0,66,1691	0/0:31,0:31:72.25:0,72,1939	1/1:8,10:18:39:1276,39,0	1/1:3,3:8:15.05:644,15,0	0/0:16,0:16:42.14:0,42,1139	1/1:12,4:17:36.09:1106,36,0	1/1:4,5:9:15.05:643,15,0	1/1:7,5:12:12.04:424,12,0	0/0:19,0:19:48.16:0,48,1301	0/0:17,0:17:42.14:0,42,1138	0/0:9,0:9:27.09:0,27,732	0/0:26,0:26:66.22:0,66,1733	0/0:19,0:19:54.14:0,54,1270	1/1:10,15:27:66.23:2686,66,0	1/1:1,1:2:1.71:126,2,0
chr10	42744769	.	AAGCAGC	A	50.70	PASS	AC=2;AF=0.037;AN=54;BaseQRankSum=1.759;DP=425;FS=2.721;HRun=0;HaplotypeScore=95.9615;InbreedingCoeff=0.7300;MQ=73.77;MQ0=0;MQRankSum=-2.124;QD=8.45;ReadPosRankSum=-0.202;VQSLOD=1.8804;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:2,4:6:6.02:131,6,0	./.	0/0:16,0:16:30.10:0,30,911	0/0:19,0:19:33.10:0,33,989	0/0:14,0:14:21.07:0,21,646	0/0:29,0:29:57.20:0,57,1871	0/0:24,0:24:66.21:0,66,2028	0/0:25,0:25:54.14:0,54,1526	0/0:14,0:14:33.11:0,33,1077	0/0:27,0:27:48.16:0,48,1528	0/0:11,0:11:18.06:0,18,552	0/0:3,0:3:6.02:0,6,202	0/0:9,0:9:15.05:0,15,504	0/0:7,0:7:15.05:0,15,500	0/0:26,0:26:63.22:0,63,1973	0/0:17,0:17:45.15:0,45,1473	0/0:12,0:12:36.09:0,36,1134	0/0:27,0:27:72.25:0,72,2312	0/0:15,0:15:33.11:0,33,1117	0/0:11,0:11:24.08:0,24,810	0/0:8,0:8:18.06:0,18,609	0/0:11,0:11:18.06:0,18,607	0/0:6,0:6:15.05:0,15,496	0/0:19,0:19:45.14:0,45,1438	0/0:18,0:18:33.11:0,33,1033	0/0:24,0:24:54.18:0,54,1755	0/0:19,0:19:48.13:0,48,1539	0/0:8,0:8:21.07:0,21,710
chr10	42745359	.	ATCTCTC	A	737.90	PASS	AB=0.984;AC=19;AF=0.365;AN=52;BaseQRankSum=1.843;DP=579;FS=8.487;HRun=0;HaplotypeScore=139.5581;InbreedingCoeff=0.1339;MQ=70.63;MQ0=21;MQRankSum=1.311;QD=2.76;ReadPosRankSum=0.395;VQSLOD=2.1204;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:31,0:28:0.49:0,0,51	0/0:14,0:14:8.34:0,8,84	./.	0/0:43,0:27:0.93:0,1,2	0/0:14,0:14:0.47:0,0,1	0/1:7,1:8:13.95:47,0,14	1/1:23,4:28:3.54:111,4,0	0/0:26,0:25:5.94:0,6,41	1/1:18,9:27:2.38:41,2,0	0/0:28,0:28:21.05:0,21,353	0/0:10,0:10:2.98:0,3,21	0/1:16,0:16:25.10:49,0,25	1/1:13,0:13:5.23:67,5,0	1/1:15,0:15:2.69:44,3,0	0/0:25,0:25:11.30:0,11,401	0/1:25,0:23:31.63:73,0,32	1/1:17,0:16:18.06:264,18,0	0/0:17,0:16:24.07:0,24,537	0/1:22,0:22:24:35,0,24	0/0:14,0:14:3:0,3,26	0/1:18,0:17:16.69:25,0,17	0/0:17,0:17:2.92:0,3,17	0/0:11,0:11:3:0,3,25	0/1:35,0:34:27.51:118,0,28	0/0:29,0:29:3.47:0,3,26	0/0:23,0:22:15.52:0,16,399	1/1:11,0:11:2.04:6,2,0	./.
chr10	42745402	.	TCTCTCA	T	2383.36	PASS	AB=0.997;AC=38;AF=0.760;AN=50;BaseQRankSum=1.671;DP=496;FS=0.000;HRun=0;HaplotypeScore=111.2623;InbreedingCoeff=-0.0790;MQ=38.96;MQ0=55;MQRankSum=2.945;QD=5.14;ReadPosRankSum=-0.201;VQSLOD=2.0753;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:32,0:28:26.17:175,26,0	0/1:10,0:10:6.11:65,0,6	./.	./.	1/1:15,0:13:2.60:24,3,0	1/1:20,0:16:11.14:129,11,0	0/1:26,0:23:11.63:69,0,12	1/1:13,0:13:27.66:190,28,0	0/1:29,1:27:9.19:44,0,9	0/1:25,0:22:18.15:18,0,376	1/1:8,0:7:2.68:11,3,0	1/1:19,0:18:14.65:166,15,0	0/1:14,0:10:2.70:94,0,3	1/1:13,14:24:2.69:62,3,0	0/1:23,0:23:14.88:15,0,285	1/1:27,0:22:6.62:252,7,0	1/1:21,0:14:29.77:488,30,0	0/1:18,0:13:7:7,0,445	1/1:15,0:14:38.90:325,39,0	./.	0/1:19,0:15:13.25:74,0,13	0/1:13,0:11:0:0,0,0	1/1:5,0:5:2.60:10,3,0	1/1:44,0:38:25.07:203,25,0	0/1:25,0:19:10.27:24,0,10	0/0:15,0:15:5.72:0,6,417	1/1:13,0:12:3.01:31,3,0	1/1:2,0:2:5.93:39,6,0
chr10	42745404	.	TCTCA	T	2586.43	PASS	AB=0.994;AC=38;AF=0.792;AN=48;BaseQRankSum=2.029;DP=491;FS=1.489;HRun=0;HaplotypeScore=101.2384;InbreedingCoeff=-0.1021;MQ=38.58;MQ0=56;MQRankSum=3.276;QD=5.77;ReadPosRankSum=-0.625;VQSLOD=2.0601;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:25:26.98:293,27,0	1/1:8,0:8:12:125,12,0	./.	./.	1/1:16,0:13:2.75:36,3,0	1/1:20,0:16:11.55:107,12,0	0/1:25,0:22:11.42:36,0,11	1/1:13,0:13:27.25:190,27,0	0/1:30,0:27:8.31:27,0,8	0/1:24,0:21:56.87:57,0,232	1/1:7,0:6:2.68:11,3,0	1/1:19,0:18:14.65:154,15,0	0/1:16,0:12:17.38:92,0,17	1/1:28,0:25:2.80:44,3,0	0/1:25,0:25:43.75:44,0,143	1/1:23,4:22:21.23:282,21,0	1/1:20,0:13:29.77:346,30,0	0/1:17,0:12:7.10:7,0,267	1/1:1,14:14:41.77:364,42,0	./.	0/1:19,1:16:13.11:104,0,13	./.	1/1:5,0:5:2.60:10,3,0	1/1:44,0:38:26.76:273,27,0	0/1:25,0:19:10.57:24,0,11	0/0:14,0:14:4.06:0,4,244	1/1:13,0:12:3.01:56,3,0	1/1:2,0:2:5.93:39,6,0
chr10	42745406	.	TCA	T	2286	PASS	AB=0.990;AC=39;AF=0.813;AN=48;BaseQRankSum=3.365;DP=488;FS=0.000;HRun=0;HaplotypeScore=94.9668;InbreedingCoeff=-0.2086;MQ=38.54;MQ0=57;MQRankSum=3.444;QD=4.98;ReadPosRankSum=0.334;VQSLOD=2.7901;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:28,1:25:26.99:335,27,0	1/1:8,0:8:14.96:146,15,0	./.	./.	1/1:15,0:12:2.88:43,3,0	1/1:20,0:16:11.49:95,11,0	0/1:24,0:21:5.40:5,0,13	1/1:0,11:11:27.25:190,27,0	0/1:30,0:27:10:11,0,10	0/1:23,1:21:99:106,0,163	1/1:6,0:5:2.68:11,3,0	1/1:20,0:19:17.49:134,17,0	0/1:17,0:12:17.43:61,0,17	1/1:28,0:25:2.90:32,3,0	0/1:25,0:25:43.67:71,0,44	1/1:27,0:22:21.22:186,21,0	1/1:20,0:13:30.34:282,30,0	0/1:17,0:12:19.72:20,0,105	1/1:15,0:14:41.76:317,42,0	./.	0/1:18,1:15:13.41:56,0,13	./.	1/1:5,0:5:2.60:10,3,0	1/1:44,0:38:23.68:168,24,0	0/1:25,0:19:7.80:32,0,8	0/1:15,0:15:34.52:35,0,114	1/1:1,12:12:3.01:34,3,0	1/1:2,0:2:5.93:39,6,0
chr10	42745411	.	CTGTGTGTG	C	57.62	PASS	AB=0.900;AC=6;AF=0.115;AN=52;BaseQRankSum=3.622;DP=536;FS=0.000;HRun=0;HaplotypeScore=134.8326;InbreedingCoeff=0.3341;MQ=38.55;MQ0=63;MQRankSum=-1.178;QD=0.61;ReadPosRankSum=-0.162;VQSLOD=2.5514;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:26:7.24:63,7,0	0/0:7,0:7:3.01:0,3,50	./.	./.	0/1:12,4:13:0:0,0,0	0/0:22,0:17:12.14:0,12,154	0/0:27,0:24:9.87:0,10,233	0/0:17,0:16:2.70:0,3,7	0/0:32,0:30:5.33:0,5,104	0/0:25,0:21:22.62:0,23,507	0/0:8,0:8:9.03:0,9,308	0/0:22,0:20:12.04:0,12,392	0/0:17,0:12:6.02:0,6,182	0/0:28,0:25:0:0,0,0	0/0:26,0:26:6.02:0,6,199	1/1:23,2:20:2.68:69,3,0	0/1:23,0:16:2.74:29,0,3	0/0:18,0:13:6.02:0,6,159	0/0:18,0:16:3.01:0,3,75	0/0:17,0:16:2.03:0,2,6	0/0:29,0:23:3.48:0,3,86	0/0:14,0:12:3.01:0,3,118	0/0:6,0:6:3.01:0,3,97	0/0:44,0:38:11.06:0,11,322	0/0:27,0:21:24.08:0,24,786	0/0:16,0:16:17.99:0,18,506	0/0:16,0:15:6.02:0,6,176	0/0:5,0:4:3.01:0,3,103
chr10	42745459	.	G	GTA	4609.81	PASS	AB=0.948;AC=33;AF=0.589;AN=56;BaseQRankSum=-0.432;DP=560;FS=2.951;HRun=0;HaplotypeScore=92.2694;InbreedingCoeff=0.5318;MQ=49.81;MQ0=50;MQRankSum=1.878;QD=11.03;ReadPosRankSum=3.332;VQSLOD=4.3831;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:29:29.77:413,30,0	1/1:3,0:3:5.58:47,6,0	0/0:16,0:7:17.89:0,18,157	0/0:18,0:12:33:0,33,318	1/1:27,0:25:32.81:252,33,0	1/1:26,0:21:37.90:254,38,0	1/1:27,0:26:14.81:252,15,0	0/1:23,0:21:7.82:320,0,8	1/1:30,0:29:30.16:312,30,0	1/1:19,0:18:18.16:349,18,0	1/1:15,0:15:18.24:158,18,0	0/0:18,0:17:13.19:0,13,149	0/0:15,0:12:17.97:0,18,167	0/0:17,0:17:14.97:0,15,121	0/1:8,11:19:1.33:51,0,1	1/1:29,0:26:26.96:314,27,0	0/1:28,0:23:1.96:239,0,2	1/1:19,0:14:32.15:254,32,0	0/1:13,0:10:1.90:165,0,2	1/1:19,0:18:23.85:189,24,0	1/1:30,0:23:0.59:167,1,0	0/0:10,0:8:13.51:0,14,99	0/0:5,0:5:8.87:0,9,83	0/0:43,0:38:38.90:0,39,292	1/1:26,0:23:38.54:440,39,0	0/1:16,0:16:8.84:283,0,9	0/1:13,0:12:2.98:105,0,3	0/1:5,0:5:31.09:48,0,31
chr10	42746711	.	G	GA	1633.26	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.847;DP=669;FS=1.132;HRun=8;HaplotypeScore=74.5818;InbreedingCoeff=0.9964;MQ=69.82;MQ0=1;MQRankSum=-1.736;QD=24.75;ReadPosRankSum=0.708;VQSLOD=4.3841;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,44:51:99:1410,123,0	1/1:1,12:13:30.09:345,30,0	0/0:21,0:20:33.91:0,34,249	0/0:13,1:11:19.54:0,20,162	0/0:31,0:31:84.03:0,84,757	0/0:30,0:30:84.03:0,84,764	0/0:20,0:20:57.03:0,57,522	0/0:27,0:27:66.02:0,66,598	0/0:24,0:24:69.02:0,69,626	0/0:27,0:27:63.97:0,64,601	0/0:24,0:24:63.02:0,63,573	0/0:24,0:24:69.02:0,69,627	0/0:26,0:26:72.04:0,72,659	0/0:17,0:17:45.02:0,45,412	0/0:24,0:24:63.01:0,63,571	0/0:25,0:25:68.98:0,69,614	0/0:27,0:27:72.04:0,72,659	0/0:15,0:15:36.02:0,36,329	0/0:26,0:26:62.97:0,63,560	0/0:33,0:34:92.08:0,92,830	0/0:16,0:16:44.96:0,45,396	0/0:27,0:27:75.01:0,75,681	0/0:19,0:19:48.02:0,48,439	0/0:12,0:12:33.02:0,33,302	0/0:23,0:23:57.02:0,57,519	0/0:30,0:30:78.03:0,78,710	0/0:24,0:23:63.01:0,63,571	0/0:16,0:16:48.03:0,48,438
chr10	42748496	.	TC	T	5434.66	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=12.205;DP=637;FS=1.065;HRun=6;HaplotypeScore=64.9951;InbreedingCoeff=0.9974;MQ=80.16;MQ0=0;MQRankSum=-2.250;QD=26.25;ReadPosRankSum=0.494;VQSLOD=5.1029;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,35:35:81.20:869,81,0	1/1:0,17:17:48.12:516,48,0	0/0:21,0:21:54.18:0,54,691	0/0:27,0:27:53.04:0,53,578	0/0:32,0:32:84.10:0,84,1091	0/0:23,0:23:63.18:0,63,800	0/0:21,0:21:60.18:0,60,773	1/1:1,30:31:78.16:821,78,0	0/0:15,0:15:39.13:0,39,513	0/0:22,0:22:60.20:0,60,789	0/0:14,0:14:36.11:0,36,461	0/0:30,0:30:84.26:0,84,1089	0/0:28,0:28:75.23:0,75,969	0/0:19,0:19:42.13:0,42,540	0/0:29,0:29:84.27:0,84,1105	0/0:27,0:27:75.24:0,75,986	1/1:3,17:20:42.11:451,42,0	0/0:24,0:24:69.19:0,69,883	1/1:1,19:20:57.09:592,57,0	1/1:1,21:22:60.15:641,60,0	1/1:3,19:22:45.11:484,45,0	0/0:34,0:34:99:0,99,1301	0/0:10,0:10:30.10:0,30,395	0/0:18,0:18:51.17:0,51,671	0/0:19,0:19:54.18:0,54,711	0/0:17,0:17:48.16:0,48,631	1/1:1,31:32:84.21:900,84,0	1/1:1,7:8:15.04:161,15,0
chr10	42749624	.	A	AT	2424.58	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-11.142;DP=713;FS=0.000;HRun=5;HaplotypeScore=98.4907;InbreedingCoeff=0.9816;MQ=82.77;MQ0=0;MQRankSum=-1.129;QD=34.15;ReadPosRankSum=1.027;VQSLOD=3.1172;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:84.17:0,84,884	0/0:11,0:11:30.07:0,30,322	0/0:31,0:30:72.08:0,72,732	0/0:18,0:18:44.73:0,45,441	1/1:3,38:41:99:1401,108,0	0/0:33,0:33:96.24:0,96,1032	0/0:25,0:25:60.14:0,60,645	0/0:37,0:37:90.22:0,90,967	0/0:19,1:20:20.67:0,21,573	0/0:45,0:45:99:0,132,1406	0/0:27,0:27:75.19:0,75,806	0/0:18,0:18:51.13:0,51,548	0/0:32,0:32:93.22:0,93,991	0/0:19,0:19:42.08:0,42,442	0/0:36,0:36:96.21:0,96,1015	1/1:1,29:30:87.28:1145,87,0	0/0:19,0:19:51.08:0,51,527	0/0:21,0:21:58.96:0,59,618	0/0:21,0:21:57.12:0,57,603	0/0:21,0:21:57.14:0,57,613	0/0:25,0:25:69.14:0,69,730	0/0:25,0:25:69.16:0,69,734	0/0:34,0:34:90.20:0,90,958	0/0:11,0:11:30.07:0,30,322	0/0:18,0:18:51.11:0,51,540	0/0:24,0:24:69.16:0,69,735	0/0:31,0:31:84.21:0,84,903	0/0:6,0:6:12.03:0,12,129
chr10	42749634	.	GA	G	7358.67	PASS	AB=0.950;AC=23;AF=0.411;AN=56;BaseQRankSum=8.219;DP=697;FS=0.603;HRun=8;HaplotypeScore=80.6654;InbreedingCoeff=0.9213;MQ=83.27;MQ0=0;MQRankSum=-3.200;QD=24.21;ReadPosRankSum=2.646;VQSLOD=5.5619;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,27:29:81.13:782,81,0	1/1:0,12:13:38.10:354,38,0	0/0:29,0:28:67.84:0,68,794	0/1:18,1:19:30.87:31,0,225	0/0:41,0:41:99:0,102,1232	1/1:2,28:31:83.17:788,83,0	1/1:4,21:25:63.09:608,63,0	0/0:30,0:30:81.23:0,81,959	1/1:1,18:19:20.85:485,21,0	1/1:4,41:45:99:1183,123,0	1/1:1,26:27:78.12:753,78,0	0/0:17,0:17:48.15:0,48,579	0/0:34,0:34:87.25:0,87,1039	0/0:16,0:16:45.10:0,45,528	1/1:4,29:33:75.11:724,75,0	0/0:32,0:32:87.25:0,87,1039	0/0:18,0:18:51.14:0,51,604	1/1:0,21:21:63.10:608,63,0	0/0:26,0:26:72.21:0,72,859	0/0:22,0:23:57.04:0,57,667	0/0:26,0:26:72.22:0,72,869	0/0:21,0:21:54.17:0,54,652	0/0:33,0:33:90.28:0,90,1087	0/0:12,0:12:33.10:0,33,399	1/1:2,12:14:36.05:348,36,0	1/1:4,24:28:72.11:694,72,0	0/0:30,0:30:84.21:0,84,990	0/0:5,0:5:12.04:0,12,145
chr10	42753563	.	T	TG	10668.30	PASS	AB=0.926;AC=54;AF=0.964;AN=56;BaseQRankSum=-1.542;DP=632;FS=9.315;HRun=1;HaplotypeScore=245.6925;InbreedingCoeff=-0.0406;MQ=79.25;MQ0=0;MQRankSum=-3.252;QD=16.88;ReadPosRankSum=8.826;VQSLOD=3.6153;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:26:48.43:443,48,0	1/1:11,0:11:11.69:188,12,0	0/1:17,2:18:96.83:97,0,109	0/1:16,1:18:50.03:50,0,136	1/1:26,0:26:71.11:480,71,0	1/1:29,0:29:77.01:526,77,0	1/1:15,0:15:41.44:277,41,0	1/1:30,0:30:44.17:530,44,0	1/1:23,0:23:45.09:380,45,0	1/1:22,0:22:64.40:412,64,0	1/1:18,0:18:30.42:300,30,0	1/1:21,0:21:9.74:323,10,0	1/1:23,0:23:65.12:440,65,0	1/1:20,0:20:34.17:337,34,0	1/1:36,0:36:99:689,104,0	1/1:23,0:23:41.03:368,41,0	1/1:28,0:28:80.96:558,81,0	1/1:22,0:22:59.24:399,59,0	1/1:23,0:23:19.09:316,19,0	1/1:30,1:31:67.17:617,67,0	1/1:15,0:15:20.52:245,21,0	1/1:22,0:22:34.34:347,34,0	1/1:25,0:25:69.03:465,69,0	1/1:20,0:20:53.35:365,53,0	1/1:22,0:22:62.03:414,62,0	1/1:25,0:25:30.89:379,31,0	1/1:31,0:30:68.07:573,68,0	1/1:8,0:8:23.63:151,24,0
chr10	42753564	.	G	GT	25409.07	PASS	AB=0.867;AC=54;AF=0.964;AN=56;BaseQRankSum=-2.076;DP=645;FS=8.037;HRun=1;HaplotypeScore=198.5638;InbreedingCoeff=-0.0371;MQ=79.95;MQ0=0;MQRankSum=-5.455;QD=39.39;ReadPosRankSum=4.697;VQSLOD=3.3495;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,25:26:66.22:989,66,0	1/1:1,10:11:30.10:449,30,0	0/1:16,4:19:46.40:240,0,46	0/1:16,2:18:99:128,0,103	1/1:0,26:26:72.24:1077,72,0	1/1:2,28:30:81.24:1189,81,0	1/1:1,15:16:42.14:629,42,0	1/1:3,29:32:90.26:1299,90,0	1/1:1,22:23:63.21:944,63,0	1/1:2,21:23:69.23:1021,69,0	1/1:1,17:18:48.16:716,48,0	1/1:2,19:21:54.18:809,54,0	1/1:0,24:24:66.22:988,66,0	1/1:1,19:20:57.19:854,57,0	1/1:2,35:37:99:1600,108,0	1/1:2,21:23:66.16:941,66,0	1/1:1,28:29:87.26:1274,87,0	1/1:2,21:23:60.20:899,60,0	1/1:4,19:23:52.29:919,52,0	1/1:3,29:32:90.30:1343,90,0	1/1:1,14:15:42.14:630,42,0	1/1:3,18:21:60.16:867,60,0	1/1:0,25:25:72.20:1051,72,0	1/1:0,20:20:54.18:808,54,0	1/1:1,21:22:66.18:963,66,0	1/1:3,23:26:78.16:1096,78,0	1/1:3,29:31:90.27:1324,90,0	1/1:1,8:9:24.08:360,24,0
chr10	42755050	.	C	CAAA	4928.14	PASS	AB=0.883;AC=51;AF=0.911;AN=56;BaseQRankSum=1.261;DP=450;FS=0.000;HRun=17;HaplotypeScore=150.8874;InbreedingCoeff=0.3690;MQ=46.87;MQ0=14;MQRankSum=-1.399;QD=11.10;ReadPosRankSum=-3.112;VQSLOD=0.6540;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,0:10:14.96:178,15,0	1/1:3,0:3:6.02:81,6,0	0/1:6,0:5:10.71:11,0,40	0/0:5,0:6:8.06:0,8,72	1/1:25,4:32:22.83:183,23,0	1/1:17,0:17:24.08:345,24,0	1/1:21,0:21:14.08:170,14,0	1/1:21,0:19:19.31:252,19,0	1/1:16,0:16:15.01:186,15,0	1/1:23,4:27:32.54:439,33,0	1/1:16,0:19:6.97:126,7,0	1/1:22,0:21:17.96:215,18,0	1/1:16,1:17:13.44:101,13,0	1/1:17,0:15:18.23:169,18,0	1/1:16,0:16:11.97:137,12,0	1/1:16,0:13:18.02:241,18,0	1/1:19,0:15:26.68:351,27,0	1/1:16,0:13:18.06:247,18,0	1/1:9,0:7:6.02:86,6,0	1/1:10,0:9:12.01:143,12,0	1/1:8,0:8:8.46:90,8,0	1/1:16,4:19:23.59:223,24,0	0/1:15,0:22:2.25:143,0,2	1/1:13,0:15:11.21:68,11,0	1/1:22,0:25:28.40:305,28,0	1/1:23,0:23:27.09:383,27,0	0/1:6,0:5:0:0,0,0	1/1:6,0:3:7.08:54,7,0
chr10	42755056	.	A	AAAAAAAAAAAAAAAAAAAAAC	15067.44	PASS	AB=1.000;AC=34;AF=0.607;AN=56;BaseQRankSum=2.222;DP=440;FS=16.915;HRun=0;HaplotypeScore=235.1446;InbreedingCoeff=-0.2358;MQ=52.15;MQ0=13;MQRankSum=-10.124;QD=36.13;ReadPosRankSum=6.051;VQSLOD=2.2178;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:6,1:24:27.08:1918,27,0	1/1:5,0:5:11.60:406,12,0	0/0:11,0:7:18.05:0,18,333	0/0:7,0:7:17.88:0,18,288	0/1:29,0:29:73.40:337,0,73	0/1:17,0:17:9.35:639,0,9	0/1:20,0:19:33.79:882,0,34	0/1:18,0:16:17.42:808,0,17	0/1:14,0:14:16.46:559,0,16	0/1:27,0:27:87.34:862,0,87	0/1:17,0:17:77.08:353,0,77	1/1:21,0:20:8.69:296,9,0	0/1:18,0:18:99:152,0,100	0/1:17,0:15:18.10:276,0,18	0/1:13,0:13:65.12:281,0,65	1/1:14,0:11:23.38:363,23,0	1/1:16,0:12:10.12:2095,10,0	0/1:16,0:14:11.88:515,0,12	0/1:10,0:8:33.36:638,0,33	1/1:6,0:5:14.63:612,15,0	1/1:5,0:5:10.85:616,11,0	0/1:22,0:20:99:395,0,106	0/1:23,0:23:99:229,0,307	0/1:15,0:14:31.31:31,0,84	0/1:23,0:23:42.07:861,0,42	1/1:21,0:21:24.18:653,24,0	0/0:5,0:4:5.86:0,6,43	1/1:6,0:3:9.03:290,9,0
chr10	43073666	.	G	GTCTC	1602.93	PASS	AB=0.879;AC=34;AF=0.810;AN=42;BaseQRankSum=-1.273;DP=450;FS=1.427;HRun=0;HaplotypeScore=79.2953;InbreedingCoeff=0.3015;MQ=58.98;MQ0=31;MQRankSum=0.158;QD=5.94;ReadPosRankSum=-1.104;VQSLOD=1.7017;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:10:3:25,3,0	1/1:7,0:7:0.47:1,0,0	./.	./.	./.	1/1:15,0:15:12.02:178,12,0	0/0:20,0:18:0.47:0,0,1	1/1:27,0:24:24.08:374,24,0	1/1:18,0:18:15.52:220,16,0	1/1:9,0:8:8.35:43,8,0	1/1:7,0:7:3.01:46,3,0	1/1:13,0:13:4.22:24,4,0	1/1:12,0:10:3.01:46,3,0	1/1:16,0:15:3.48:49,3,0	1/1:18,0:18:3.01:51,3,0	1/1:8,0:8:3.01:49,3,0	0/0:17,0:18:23.94:0,24,338	0/1:8,0:6:0:0,0,0	1/1:8,2:9:3.01:48,3,0	1/1:13,0:12:8.99:128,9,0	0/1:22,6:27:0:0,0,0	./.	./.	./.	0/1:14,0:13:0:0,0,0	1/1:18,0:17:12.01:175,12,0	0/1:10,7:18:72.88:250,0,73	./.
chr10	43073701	.	TCCTCCCCACCC	T	1127.21	PASS	AB=0.952;AC=14;AF=0.280;AN=50;BaseQRankSum=-4.387;DP=368;FS=5.359;HRun=0;HaplotypeScore=84.7654;InbreedingCoeff=-0.2569;MQ=59.55;MQ0=30;MQRankSum=1.636;QD=7.57;ReadPosRankSum=-0.333;VQSLOD=1.3537;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:11,0:9:13.41:13,0,80	0/0:3,0:3:2.53:0,3,102	0/0:37,0:9:14.98:0,15,325	0/0:66,0:12:20.23:0,20,236	0/0:3,0:3:0.47:0,0,1	0/1:16,0:16:56.78:155,0,57	0/0:17,0:13:20.06:0,20,180	0/1:20,0:19:99:192,0,1096	0/1:13,0:12:99:173,0,113	0/1:7,2:8:69.63:231,0,70	1/1:2,0:3:3.01:70,3,0	0/0:15,0:15:8.98:0,9,124	0/1:6,0:5:56.32:64,0,56	0/1:14,0:12:37.31:37,0,61	0/1:14,2:16:14.03:66,0,14	0/1:10,1:11:73.98:87,0,74	0/0:12,0:12:30.10:0,30,1139	0/0:7,0:6:6:0,6,107	0/1:7,0:6:37.84:38,0,195	0/1:10,0:9:35.91:36,0,74	0/0:15,0:13:12.04:0,12,229	./.	./.	0/0:11,0:8:5.46:0,5,47	0/0:7,0:6:0.47:0,0,1	0/1:11,0:8:56.85:104,0,57	0/0:15,0:15:23.90:0,24,709	./.
chr10	43073702	.	C	CTCTCTCTCCT	1761.50	PASS	AB=0.932;AC=29;AF=0.580;AN=50;BaseQRankSum=-1.623;DP=328;FS=1.763;HRun=0;HaplotypeScore=86.1041;InbreedingCoeff=0.3164;MQ=62.10;MQ0=28;MQRankSum=-1.190;QD=8.12;ReadPosRankSum=-4.079;VQSLOD=0.7005;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:7,0:5:15.97:16,0,28	0/0:2,0:3:2.53:0,3,31	0/0:36,0:9:8.83:0,9,109	0/1:65,0:12:10.63:11,0,80	1/1:3,0:3:0.89:2,1,0	1/1:11,0:15:14.50:239,14,0	1/1:10,0:11:7.09:59,7,0	0/1:14,0:18:99:378,0,193	1/1:12,1:13:18.41:368,18,0	0/1:8,0:7:23.67:157,0,24	1/1:3,0:3:3.01:70,3,0	1/1:1,6:11:5.39:39,5,0	1/1:4,0:3:6.02:101,6,0	1/1:7,0:6:4.26:51,4,0	1/1:5,0:12:3:79,3,0	1/1:7,0:7:2.88:96,3,0	0/0:11,0:11:29.97:0,30,731	0/0:5,0:6:2.81:0,3,28	0/0:6,0:5:4.53:0,5,61	1/1:7,0:8:4.42:73,4,0	0/0:13,0:11:5.91:0,6,57	./.	./.	0/0:11,0:8:0.94:0,1,1	0/1:5,0:5:0:0,0,0	1/1:10,0:6:12.01:175,12,0	0/0:14,0:14:16.93:0,17,231	./.
chr10	43073724	.	TCACA	T	1081.74	PASS	AB=0.652;AC=29;AF=0.690;AN=42;BaseQRankSum=0.100;DP=313;FS=5.099;HRun=0;HaplotypeScore=64.8805;InbreedingCoeff=0.3587;MQ=63.61;MQ0=27;MQRankSum=-0.420;QD=6.60;ReadPosRankSum=-1.381;VQSLOD=1.4265;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:12:9.03:0,9,139	0/0:5,0:5:6.02:0,6,140	./.	./.	./.	1/1:12,1:13:5.75:94,6,0	0/1:10,7:16:0.02:0,0,0	./.	1/1:5,7:11:8.88:114,9,0	1/1:9,0:8:9.01:108,9,0	0/0:3,0:4:0:0,0,0	1/1:9,0:11:12.04:166,12,0	1/1:2,5:6:2.83:46,3,0	1/1:6,0:7:6.01:70,6,0	1/1:14,0:14:14.03:216,14,0	1/1:5,0:7:8.86:67,9,0	1/1:5,0:8:3.01:30,3,0	0/1:5,6:9:38.80:39,0,54	./.	0/0:5,0:5:0:0,0,0	./.	0/1:3,6:7:0:0,0,0	0/0:2,3:5:0:0,0,0	1/1:12,1:10:3.01:46,3,0	1/1:9,0:8:3.01:45,3,0	1/1:5,5:9:11.84:124,12,0	1/1:4,0:5:3:28,3,0	./.
chr10	43073953	.	G	GT	7304.49	PASS	AB=0.833;AC=55;AF=0.982;AN=56;BaseQRankSum=-2.834;DP=209;FS=24.999;HRun=1;HaplotypeScore=100.1462;InbreedingCoeff=-0.0560;MQ=68.23;MQ0=0;MQRankSum=-1.798;QD=34.95;ReadPosRankSum=3.293;VQSLOD=3.0549;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,4:4:9.03:135,9,0	1/1:0,2:2:6.02:90,6,0	1/1:5,3:8:5.88:182,6,0	0/1:4,1:5:8.76:94,0,9	1/1:1,6:7:15.05:214,15,0	1/1:3,6:9:18.06:269,18,0	1/1:3,4:7:15.01:200,15,0	1/1:4,12:16:42.07:584,42,0	1/1:0,8:8:24.08:359,24,0	1/1:1,4:5:12.04:180,12,0	1/1:1,4:5:12:155,12,0	1/1:3,4:7:15.01:199,15,0	1/1:1,7:8:21.07:314,21,0	1/1:0,8:8:24.08:359,24,0	1/1:0,12:12:33.11:493,33,0	1/1:2,6:8:18.53:270,19,0	1/1:3,10:13:33.10:474,33,0	1/1:0,6:6:18.06:269,18,0	1/1:2,11:13:39.10:559,39,0	1/1:2,11:12:29.30:488,29,0	1/1:3,3:6:10.59:138,11,0	1/1:0,2:2:3.01:45,3,0	1/1:1,4:5:15.01:199,15,0	1/1:1,3:4:3.01:45,3,0	1/1:1,6:7:20.10:275,20,0	1/1:2,7:9:24.06:337,24,0	1/1:4,7:11:6.73:333,7,0	1/1:0,1:1:3.01:45,3,0
chr10	43080549	.	T	TAA	8797.28	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-15.652;DP=695;FS=7.902;HRun=1;HaplotypeScore=78.1878;InbreedingCoeff=0.9671;MQ=85.70;MQ0=0;MQRankSum=-2.486;QD=53.00;ReadPosRankSum=-1.211;VQSLOD=3.7239;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,123,1949	0/0:14,0:14:39.13:0,39,635	0/0:15,0:15:45.15:0,45,727	0/0:29,0:29:87.18:0,87,1256	0/0:30,0:30:90.31:0,90,1466	0/0:25,0:24:72.23:0,72,1148	0/0:11,0:11:33.08:0,33,489	1/1:2,38:41:99:2270,117,0	0/0:21,0:21:63.20:0,63,1002	0/0:40,0:40:99:0,120,1895	0/0:21,0:21:60.19:0,60,945	0/0:16,0:16:48.12:0,48,707	0/0:31,0:31:93.30:0,93,1483	0/0:28,0:28:81.28:0,81,1311	0/0:28,0:28:84.22:0,84,1246	1/1:1,20:21:5.29:987,5,0	0/0:31,0:31:93.30:0,93,1487	0/0:28,0:28:78.19:0,78,1215	1/1:2,17:20:54.15:984,54,0	1/1:0,27:27:81.28:1639,81,0	1/1:0,15:15:39.13:792,39,0	0/0:22,0:22:66.20:0,66,1028	0/0:28,0:28:84.27:0,84,1344	0/0:17,0:17:51.11:0,51,733	0/0:19,0:19:51.15:0,51,780	0/0:32,0:32:96.31:0,96,1522	1/1:0,38:39:96.33:1942,96,0	1/1:0,3:3:9.03:183,9,0
chr10	43083481	.	AG	A	845.39	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.875;DP=774;FS=0.717;HRun=1;HaplotypeScore=75.6633;InbreedingCoeff=0.9136;MQ=83.23;MQ0=1;MQRankSum=-2.467;QD=32.52;ReadPosRankSum=-1.739;VQSLOD=2.9129;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:60,0:60:99:0,177,2731	0/0:5,0:5:15.05:0,15,240	0/0:34,0:32:82.19:0,82,1424	0/0:28,0:25:9.95:0,10,827	1/1:0,26:26:69.16:940,69,0	0/0:26,0:26:78.16:0,78,1166	0/0:26,0:26:78.24:0,78,1198	0/0:32,0:32:93.31:0,93,1467	0/0:34,0:34:99:0,102,1605	0/0:32,0:32:96.32:0,96,1486	0/0:25,0:25:75.26:0,75,1198	0/0:20,0:20:57.18:0,57,887	0/0:30,0:30:90.31:0,90,1428	0/0:19,0:19:57.19:0,57,910	0/0:39,0:39:99:0,117,1869	0/0:31,0:31:93.29:0,93,1437	0/0:28,0:28:84.29:0,84,1332	0/0:17,0:17:45.15:0,45,718	0/0:18,0:18:54.18:0,54,860	0/0:21,0:21:63.19:0,63,980	0/0:36,0:36:99:0,108,1702	0/0:24,0:24:69.22:0,69,1080	0/0:25,0:25:72.21:0,72,1101	0/0:29,0:29:87.28:0,87,1366	0/0:33,0:33:96.33:0,96,1530	0/0:33,0:33:99:0,99,1578	0/0:39,0:39:99:0,117,1816	0/0:4,0:4:12.04:0,12,192
chr10	43084523	.	C	CT	16690.65	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=-17.416;DP=673;FS=2.417;HRun=0;HaplotypeScore=61.0751;InbreedingCoeff=0.9999;MQ=83.56;MQ0=0;MQRankSum=-4.948;QD=44.99;ReadPosRankSum=2.409;VQSLOD=5.1957;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,39:39:99:1870,117,0	1/1:0,11:11:33.11:528,33,0	0/0:24,0:24:69.04:0,69,879	0/0:28,0:28:84.27:0,84,1146	1/1:0,24:24:69.24:1103,69,0	0/0:18,0:18:54.18:0,54,755	0/0:28,0:28:57.70:0,58,1050	1/1:3,23:26:69.19:1045,69,0	0/0:25,0:25:75.25:0,75,1046	1/1:0,22:22:66.22:1047,66,0	1/1:1,16:17:51.17:806,51,0	0/0:30,0:30:84.27:0,84,1152	0/0:28,0:28:78.24:0,78,1057	0/0:31,0:31:84.28:0,84,1174	1/1:0,33:33:96.33:1535,96,0	1/1:1,26:27:69.24:1103,69,0	0/0:23,0:23:69.23:0,69,964	1/1:1,24:25:66.23:1055,66,0	1/1:1,17:18:51.17:799,51,0	1/1:0,26:26:75.26:1199,75,0	1/1:0,28:28:84.29:1343,84,0	0/0:21,0:21:63.20:0,63,864	0/0:17,0:17:51.17:0,51,713	0/0:28,0:28:78.26:0,78,1087	1/1:0,23:23:66.23:1055,66,0	1/1:0,15:15:45.15:717,45,0	1/1:0,23:23:60.20:959,60,0	1/1:2,12:14:33.11:527,33,0
chr10	43085360	.	CG	C	10559.86	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=13.465;DP=710;FS=22.017;HRun=3;HaplotypeScore=85.4068;InbreedingCoeff=0.9976;MQ=90.60;MQ0=0;MQRankSum=-5.866;QD=30.70;ReadPosRankSum=0.518;VQSLOD=3.0368;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,30:34:84.22:1021,84,0	1/1:0,11:11:30.09:371,30,0	0/0:35,0:35:99:0,102,1301	0/0:22,0:22:55.72:0,56,675	0/0:17,0:17:42.14:0,42,601	0/0:13,0:13:30.06:0,30,408	0/0:31,0:31:84.26:0,84,1171	1/1:3,27:30:72.22:879,72,0	0/0:26,0:26:78.21:0,78,1080	1/1:0,20:20:54.15:653,54,0	1/1:1,7:8:21.07:259,21,0	0/0:32,0:32:87.27:0,87,1214	0/0:33,0:33:99:0,99,1370	0/0:50,0:49:99:0,150,2038	1/1:5,26:31:69.22:853,69,0	1/1:1,27:28:35.04:885,35,0	0/0:41,0:41:99:0,123,1727	1/1:0,31:31:84.23:1024,84,0	1/1:2,17:20:54.17:667,54,0	1/1:1,13:14:36.11:445,36,0	1/1:4,47:51:99:1372,111,0	0/0:21,0:21:57.14:0,57,743	0/0:7,0:7:21.07:0,21,290	0/0:38,0:38:99:0,114,1619	1/1:1,13:14:33.10:409,33,0	1/1:2,20:22:57.09:684,57,0	1/1:0,24:24:66.19:816,66,0	1/1:0,6:6:18.06:223,18,0
chr10	43085505	.	T	TCGCCACCATGGCTCAGCCATGGGA	88262.04	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=5.640;DP=785;FS=0.278;HRun=0;HaplotypeScore=437.8295;InbreedingCoeff=0.9994;MQ=74.98;MQ0=0;MQRankSum=-20.822;QD=193.13;ReadPosRankSum=0.352;VQSLOD=4.0245;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:26,3:34:57.13:3510,57,0	1/1:6,7:13:39.13:3367,39,0	0/0:23,0:23:56.98:0,57,1851	0/0:23,0:23:57.17:0,57,2398	1/1:14,5:21:36.10:3307,36,0	0/0:22,0:22:63.19:0,63,3325	0/0:24,0:24:72.22:0,72,3592	1/1:33,0:33:84.27:5264,84,0	0/0:27,0:27:78.23:0,78,4116	1/1:31,6:40:99:9561,114,0	1/1:9,4:15:21.07:2092,21,0	0/0:31,0:31:89.82:0,90,5279	0/0:28,0:28:75.24:0,75,4644	0/0:44,0:44:99:0,126,5943	1/1:30,6:40:99:8026,105,0	1/1:28,8:38:99:9491,102,0	0/0:27,0:27:75.26:0,75,4405	1/1:14,2:20:51.11:4047,51,0	1/1:21,1:24:60.21:3772,60,0	1/1:19,6:28:60.12:4682,60,0	1/1:27,2:34:54.18:3718,54,0	0/0:23,0:23:66.23:0,66,4020	0/0:20,0:20:60.19:0,60,3484	0/0:36,0:36:96.31:0,96,5729	1/1:19,9:29:72.18:5980,72,0	1/1:22,10:33:96.33:8809,96,0	1/1:28,8:40:99:9614,102,0	1/1:7,4:15:33.11:3022,33,0
chr10	43089433	.	AATAC	A	7009.38	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=2.782;DP=690;FS=8.375;HRun=0;HaplotypeScore=177.8391;InbreedingCoeff=0.9401;MQ=58.53;MQ0=4;MQRankSum=-5.057;QD=18.45;ReadPosRankSum=-0.183;VQSLOD=3.7983;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:20,15:35:30.52:434,31,0	1/1:2,1:3:5.99:71,6,0	0/0:23,0:12:3.01:0,3,43	0/0:18,0:14:13.74:0,14,219	1/1:11,11:22:26.97:358,27,0	0/0:25,0:25:36.06:0,36,590	0/0:26,0:26:33.58:0,34,628	1/1:28,10:37:59.92:787,60,0	0/0:32,0:32:39.10:0,39,705	1/1:14,11:25:57.19:909,57,0	1/1:16,8:24:38.81:410,39,0	0/0:30,0:30:47.96:0,48,751	0/0:32,0:32:48.09:0,48,867	0/0:26,0:26:21.07:0,21,392	1/1:14,9:23:27.02:365,27,0	1/1:16,13:29:42.09:615,42,0	0/0:28,0:28:43.07:0,43,954	1/1:19,5:24:45.02:568,45,0	1/1:19,6:24:27.01:365,27,0	1/1:18,8:26:26.93:325,27,0	1/1:23,6:29:8.99:115,9,0	0/0:17,0:17:19.74:0,20,293	0/0:19,0:19:15.04:0,15,263	0/0:34,0:34:39.12:0,39,692	1/1:8,3:11:11.99:124,12,0	1/1:19,9:28:57.04:798,57,0	1/1:17,12:29:35.98:470,36,0	1/1:3,6:9:18.06:295,18,0
chr10	43089468	.	GCATA	G	11822.83	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=6.218;DP=708;FS=8.468;HRun=0;HaplotypeScore=160.9496;InbreedingCoeff=0.9593;MQ=49.62;MQ0=10;MQRankSum=0.385;QD=19.01;ReadPosRankSum=3.994;VQSLOD=4.1639;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,26:39:39.08:599,39,0	1/1:0,9:9:12.04:201,12,0	0/0:27,0:6:12.04:0,12,242	0/0:34,0:20:36.59:0,37,750	1/1:5,17:22:15.05:251,15,0	1/1:4,17:21:27.09:451,27,0	1/1:5,20:25:27.09:447,27,0	1/1:14,26:40:48.12:677,48,0	1/1:8,25:33:27.09:451,27,0	1/1:8,16:24:48.15:752,48,0	1/1:6,18:24:36.12:601,36,0	1/1:5,30:35:45.15:751,45,0	1/1:9,20:29:30.10:501,30,0	1/1:4,24:28:30.10:501,30,0	1/1:2,14:16:21.07:351,21,0	1/1:12,22:34:30.10:501,30,0	0/0:25,0:25:54.12:0,54,1169	1/1:7,14:21:24.02:344,24,0	1/1:12,8:16:27.05:419,27,0	1/1:5,21:26:36.12:601,36,0	1/1:8,21:29:27.09:451,27,0	1/1:3,21:24:30.10:501,30,0	1/1:2,16:18:14.88:250,15,0	1/1:4,27:31:27.09:451,27,0	1/1:4,13:17:24.08:401,24,0	1/1:10,14:24:36.07:570,36,0	1/1:8,13:21:27.09:450,27,0	1/1:5,7:12:21.07:348,21,0
chr10	43090555	.	GAAAAGA	G	675.78	PASS	AB=0.576;AC=1;AF=0.018;AN=56;BaseQRankSum=4.350;DP=471;FS=0.000;HRun=0;HaplotypeScore=102.4024;InbreedingCoeff=-0.0228;MQ=71.39;MQ0=7;MQRankSum=-4.537;QD=35.57;ReadPosRankSum=-1.259;VQSLOD=2.6273;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:81.26:0,81,2835	0/0:5,0:5:15.04:0,15,442	0/0:23,0:12:28:0,28,549	0/0:19,0:12:25.33:0,25,601	0/1:5,14:18:99:750,0,253	0/0:19,0:18:57.20:0,57,2045	0/0:18,0:16:45.11:0,45,1378	0/0:21,0:20:57.19:0,57,1810	0/0:15,0:15:45.15:0,45,1473	0/0:16,0:15:38.58:0,39,1025	0/0:25,0:25:66.23:0,66,1771	0/0:6,0:6:15.04:0,15,458	0/0:7,0:7:11.95:0,12,415	0/0:14,0:14:30.09:0,30,1081	0/0:13,0:13:30.10:0,30,758	0/0:9,0:9:27.09:0,27,960	0/0:36,0:35:99:0,105,3485	0/0:32,0:32:81.26:0,81,2094	0/0:10,0:8:21.07:0,21,682	0/0:9,0:9:27.09:0,27,972	0/0:3,0:3:9.03:0,9,324	0/0:13,0:13:39.13:0,39,1386	0/0:19,0:18:45.15:0,45,1570	0/0:17,0:17:45.10:0,45,1451	0/0:20,0:20:51.18:0,51,1344	0/0:17,0:17:48.16:0,48,1250	0/0:20,0:19:60.21:0,60,2121	0/0:11,0:11:33.10:0,33,1099
chr10	43090641	.	GGAAAAAAAAAAAAAAA	G	3962.50	PASS	AB=0.859;AC=16;AF=0.286;AN=56;BaseQRankSum=7.198;DP=475;FS=18.536;HRun=0;HaplotypeScore=112.5194;InbreedingCoeff=0.4418;MQ=37.42;MQ0=92;MQRankSum=-0.673;QD=26.07;ReadPosRankSum=5.252;VQSLOD=0.4914;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:23:30.10:0,30,1254	0/0:5,0:1:3.01:0,3,167	0/0:30,0:2:6.02:0,6,251	0/0:34,0:2:6.02:0,6,285	1/1:9,0:7:17.64:304,18,0	0/1:21,0:17:95.48:95,0,679	0/1:13,0:7:1.79:2,0,424	0/0:16,0:15:41.98:0,42,1173	0/0:14,0:14:0.30:0,0,686	0/0:11,0:6:11.72:0,12,571	0/1:12,0:12:35.30:35,0,552	1/1:5,12:13:12.04:531,12,0	1/1:4,14:14:18.81:814,19,0	0/1:2,14:16:0.19:660,0,0	0/0:13,0:11:15.05:0,15,825	0/0:12,0:11:21.06:0,21,875	0/0:37,0:32:81.08:0,81,2954	0/0:34,0:18:21.07:0,21,1158	0/0:16,0:9:27.06:0,27,757	0/0:14,0:7:15.02:0,15,428	0/0:8,0:6:12.04:0,12,242	1/1:3,5:6:17.80:682,18,0	1/1:1,9:10:20.96:783,21,0	0/1:6,5:9:29.64:30,0,97	0/0:8,0:7:11.40:0,11,449	0/1:15,0:11:26.53:27,0,1111	0/0:23,0:19:57.04:0,57,1524	0/0:17,0:11:30.10:0,30,747
chr10	43090725	.	GC	G	235.35	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.848;DP=471;FS=5.697;HRun=1;HaplotypeScore=55.8137;InbreedingCoeff=0.9180;MQ=79.37;MQ0=0;MQRankSum=-3.650;QD=21.40;ReadPosRankSum=-0.576;VQSLOD=3.3192;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,99,1547	0/0:6,0:6:15.05:0,15,239	0/0:16,0:16:47.73:0,48,671	0/0:22,0:22:60.17:0,60,915	1/1:2,9:11:24.08:329,24,0	0/0:14,0:14:39.13:0,39,622	0/0:22,0:22:63.21:0,63,1004	0/0:24,0:24:72.18:0,72,1071	0/0:22,0:22:60.19:0,60,931	0/0:13,0:13:39.13:0,39,622	0/0:9,0:9:27.05:0,27,392	0/0:15,0:15:42.14:0,42,657	0/0:10,0:10:30.10:0,30,466	0/0:15,0:15:33.11:0,33,523	0/0:13,0:13:39.13:0,39,621	0/0:17,0:17:45.12:0,45,665	0/0:34,0:34:99:0,102,1622	0/0:31,0:31:90.31:0,90,1427	0/0:13,0:12:39.12:0,39,602	0/0:8,0:8:24.07:0,24,356	0/0:31,0:31:90.29:0,90,1413	0/0:10,0:10:30.10:0,30,473	0/0:7,0:6:18.06:0,18,286	0/0:21,0:21:57.15:0,57,879	0/0:10,0:10:30.10:0,30,473	0/0:20,0:20:57.19:0,57,888	0/0:20,0:20:60.20:0,60,951	0/0:3,0:3:9.03:0,9,144
chr10	43090920	.	A	AG	1424.64	PASS	AB=0.925;AC=52;AF=0.963;AN=54;BaseQRankSum=-1.876;DP=262;FS=7.240;HRun=1;HaplotypeScore=64.4200;InbreedingCoeff=0.1735;MQ=75.76;MQ0=1;MQRankSum=-1.501;QD=5.48;ReadPosRankSum=-1.111;VQSLOD=-0.1162;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:17:25.59:121,26,0	1/1:1,0:1:1.55:4,2,0	1/1:2,1:3:8.87:74,9,0	0/1:13,3:16:28.96:87,0,29	./.	1/1:4,0:4:5.29:12,5,0	1/1:12,0:12:16.05:109,16,0	1/1:10,1:11:22.83:144,23,0	1/1:14,0:14:17.12:64,17,0	1/1:10,0:10:21.18:92,21,0	0/1:3,0:3:0:0,0,0	1/1:11,1:12:11.60:43,12,0	1/1:11,0:11:7.10:24,7,0	1/1:11,0:11:5.68:13,6,0	1/1:12,0:12:10.60:35,11,0	1/1:12,0:12:19.68:129,20,0	1/1:10,0:10:15.86:90,16,0	1/1:8,0:8:13.72:60,14,0	1/1:6,0:6:9.37:54,9,0	1/1:6,1:7:8.98:43,9,0	1/1:16,0:16:8.22:63,8,0	1/1:5,0:5:5.46:12,5,0	1/1:4,0:4:5.87:35,6,0	1/1:16,0:16:8.43:38,8,0	1/1:6,0:6:6.70:15,7,0	1/1:10,0:10:11.45:45,11,0	1/1:15,1:16:12.49:76,12,0	1/1:6,0:5:5.66:35,6,0
chr10	43093651	.	G	GA	4979.22	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=-14.635;DP=615;FS=3.078;HRun=7;HaplotypeScore=64.1889;InbreedingCoeff=0.9147;MQ=70.94;MQ0=0;MQRankSum=-2.688;QD=27.97;ReadPosRankSum=0.562;VQSLOD=5.6004;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,132,1274	0/0:11,0:11:24.03:0,24,232	0/0:20,0:20:51.08:0,51,489	0/1:15,0:15:6.28:6,0,221	1/1:3,22:25:63.19:761,63,0	0/0:26,0:26:75.08:0,75,711	0/0:19,0:19:42.06:0,42,405	0/0:27,0:27:72.10:0,72,691	0/0:23,0:23:69.11:0,69,666	1/1:3,22:25:66.18:784,66,0	1/1:1,21:22:63.15:745,63,0	0/0:15,0:15:42.06:0,42,400	0/0:18,0:18:50.99:0,51,475	0/0:18,0:18:45.06:0,45,429	1/1:3,17:20:39.12:471,39,0	0/0:32,0:32:78.11:0,78,747	0/0:38,0:38:99:0,108,1043	1/1:4,24:28:66.16:779,66,0	0/0:16,0:16:48.07:0,48,459	0/0:26,1:27:29.86:0,30,572	0/0:21,0:21:54.07:0,54,521	0/0:12,0:12:36.05:0,36,342	0/0:11,0:11:21.03:0,21,203	0/0:25,0:25:69.01:0,69,648	1/1:1,13:14:36.11:435,36,0	1/1:1,28:29:84.22:998,84,0	0/0:25,0:25:48.33:0,48,533	0/0:3,0:3:9.01:0,9,87
chr10	43093809	.	G	GCAGA	349.37	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-2.974;DP=597;FS=1.639;HRun=0;HaplotypeScore=94.6057;InbreedingCoeff=0.9692;MQ=60.62;MQ0=5;MQRankSum=0.152;QD=18.39;ReadPosRankSum=2.545;VQSLOD=3.3585;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:26:39.05:0,39,515	0/0:8,0:8:15.03:0,15,199	0/0:22,0:14:29.91:0,30,343	0/0:16,0:14:27.06:0,27,315	0/0:16,0:16:26.99:0,27,338	0/0:19,0:21:51.05:0,51,688	0/0:17,0:17:42.06:0,42,525	0/0:32,0:32:63.14:0,63,835	0/0:29,0:29:66.18:0,66,968	0/0:27,0:27:60.19:0,60,910	0/0:15,0:15:39.08:0,39,588	0/0:24,0:24:60.17:0,60,897	0/0:16,0:16:45.15:0,45,715	0/0:20,0:20:54.14:0,54,816	0/0:24,0:24:63.17:0,63,940	1/1:5,14:19:18.06:440,18,0	0/0:32,0:32:90.17:0,90,1281	0/0:22,0:22:51.08:0,51,732	0/0:25,0:23:42.01:0,42,618	0/0:15,0:15:39.06:0,39,497	0/0:18,0:18:48.07:0,48,659	0/0:26,0:26:60.17:0,60,897	0/0:18,0:17:30.07:0,30,422	0/0:19,0:19:45.11:0,45,646	0/0:29,0:29:68.78:0,69,1003	0/0:23,0:23:54.17:0,54,841	0/0:29,0:29:83.99:0,84,1175	0/0:6,0:7:21.04:0,21,277
chr10	43094377	.	A	AGCTTGGGACAG	39073.87	PASS	AB=0.750;AC=54;AF=0.964;AN=56;BaseQRankSum=0.160;DP=412;FS=24.219;HRun=0;HaplotypeScore=369.1338;InbreedingCoeff=-0.0440;MQ=58.91;MQ0=0;MQRankSum=-2.998;QD=94.84;ReadPosRankSum=0.805;VQSLOD=4.1671;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:26:59.10:2287,59,0	1/1:4,0:4:9.03:354,9,0	0/1:4,0:7:39.96:534,0,40	0/1:6,1:8:38.54:624,0,39	1/1:13,0:14:33.10:988,33,0	1/1:20,0:20:30.32:1711,30,0	1/1:19,0:19:54.17:2067,54,0	1/1:20,0:20:60.10:2255,60,0	1/1:21,0:21:60.21:2280,60,0	1/1:16,0:17:51.18:2032,51,0	1/1:18,0:22:51.18:1914,51,0	1/1:15,0:15:38.77:1718,39,0	1/1:22,0:22:66.23:2546,66,0	1/1:16,0:16:42.14:1817,42,0	1/1:21,0:21:63.22:2521,63,0	1/1:8,0:8:24.07:866,24,0	1/1:14,0:14:29.60:1183,30,0	1/1:12,0:12:27.09:818,27,0	1/1:12,0:12:29.94:1072,30,0	1/1:12,0:12:36.12:1341,36,0	1/1:14,0:14:36.12:1191,36,0	1/1:11,0:17:33.10:1106,33,0	1/1:9,0:13:27.09:999,27,0	1/1:10,0:11:15.01:308,15,0	1/1:11,0:11:24.08:1097,24,0	1/1:16,0:16:43.53:1661,44,0	1/1:18,0:18:36.12:1506,36,0	1/1:2,0:2:6.02:278,6,0
chr10	43095242	.	GCAAGTAC	G	9755.59	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=15.315;DP=730;FS=0.000;HRun=0;HaplotypeScore=172.6651;InbreedingCoeff=0.9979;MQ=81.64;MQ0=0;MQRankSum=-16.494;QD=76.22;ReadPosRankSum=1.194;VQSLOD=5.2213;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,132,5186	0/0:8,0:8:24.08:0,24,924	0/0:27,0:27:79.50:0,80,2646	0/0:19,0:19:51.13:0,51,1670	0/0:27,0:27:81.26:0,81,3171	0/0:21,0:21:63.22:0,63,2530	0/0:27,0:27:81.28:0,81,3378	0/0:33,0:33:99:0,99,3970	0/0:27,0:27:81.28:0,81,3307	1/1:0,28:28:84.29:2345,84,0	1/1:0,12:12:36.12:957,36,0	0/0:30,0:30:90.31:0,90,3712	0/0:25,0:25:75.24:0,75,2947	0/0:27,0:27:81.26:0,81,3246	1/1:0,22:22:50.94:1398,51,0	0/0:33,0:33:99:0,99,3872	0/0:38,0:38:99:0,114,4575	1/1:0,7:7:18.06:503,18,0	0/0:19,0:19:57.20:0,57,2277	0/0:16,0:16:48.15:0,48,1914	0/0:60,0:60:99:0,181,7076	0/0:18,0:18:54.19:0,54,2228	0/0:20,0:20:60.21:0,60,2514	0/0:28,0:28:84.29:0,84,3445	1/1:0,25:25:69.24:1823,69,0	1/1:0,34:34:99:2729,102,0	0/0:35,0:35:99:0,105,4261	0/0:20,0:20:60.21:0,60,2517
chr10	43096129	.	T	TA	2792.53	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=-9.387;DP=560;FS=3.703;HRun=9;HaplotypeScore=64.5305;InbreedingCoeff=0.9239;MQ=80.57;MQ0=0;MQRankSum=-0.079;QD=19.00;ReadPosRankSum=1.487;VQSLOD=4.2539;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:61.51:0,62,519	0/0:10,0:11:32.03:0,32,266	0/0:31,0:29:35.80:0,36,324	0/1:22,0:21:2.77:3,0,176	0/0:26,0:26:71.92:0,72,616	0/0:24,0:24:59.93:0,60,514	0/0:15,0:15:32.98:0,33,286	0/0:34,0:35:83.89:0,84,711	0/0:15,0:15:35.97:0,36,308	1/1:6,13:20:18.96:420,19,0	1/1:6,22:28:69.14:746,69,0	0/0:10,0:10:26.99:0,27,234	0/0:15,0:15:41.99:0,42,365	0/0:12,0:12:32.99:0,33,287	1/1:2,16:18:13.10:372,13,0	0/0:15,0:15:29.97:0,30,260	0/0:28,0:28:71.97:0,72,625	1/1:1,15:16:45.12:498,45,0	0/0:22,0:22:56.98:0,57,495	0/0:35,0:35:92.95:0,93,804	0/0:8,0:8:24:0,24,208	0/0:14,0:14:35.99:0,36,313	0/0:18,0:18:47.21:0,47,397	0/0:16,0:16:47.99:0,48,417	1/1:6,20:26:54.15:597,54,0	1/1:5,10:16:31.14:343,31,0	0/0:20,0:20:24.49:0,24,357	0/0:19,1:20:17.80:0,18,383
chr10	43102534	.	ATGGGTGGG	A	395.80	PASS	AB=1.000;AC=13;AF=0.722;AN=18;BaseQRankSum=-2.239;DP=97;FS=0.000;HRun=0;HaplotypeScore=23.8004;MQ=86.43;MQ0=3;MQRankSum=0.354;QD=14.66;ReadPosRankSum=2.003;VQSLOD=1.2202;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:1,2:3:6.02:154,6,0	./.	0/0:10,0:6:0.47:0,0,1	./.	./.	./.	./.	1/1:4,2:6:6.02:93,6,0	./.	1/1:5,0:5:2.68:11,3,0	1/1:4,1:5:3.01:77,3,0	./.	./.	./.	./.	1/1:1,0:1:3.01:77,3,0	./.	0/0:6,0:6:1.25:0,1,3	./.	./.	./.	./.	./.	./.	1/1:5,0:5:2.92:17,3,0	./.	./.	0/1:2,0:2:5.83:42,0,6
chr10	43102612	.	TATGCATGC	T	1430.96	PASS	AB=0.945;AC=12;AF=0.222;AN=54;BaseQRankSum=-6.777;DP=296;FS=0.000;HRun=0;HaplotypeScore=117.7083;InbreedingCoeff=-0.1237;MQ=64.74;MQ0=0;MQRankSum=3.221;QD=10.15;ReadPosRankSum=0.811;VQSLOD=2.1555;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:33.11:0,33,1061	0/0:2,0:2:6.02:0,6,212	1/1:9,0:9:2.96:19,3,0	./.	0/1:9,1:10:2.64:3,0,15	0/1:10,0:10:2.38:2,0,348	0/0:11,0:11:13.42:0,13,188	0/1:27,0:27:64.36:1008,0,64	0/0:6,0:6:15.05:0,15,445	0/1:16,0:16:99:118,0,749	0/0:4,0:4:9.03:0,9,226	0/0:10,0:10:30.10:0,30,822	0/0:9,0:9:14.08:0,14,361	0/0:9,0:9:21.07:0,21,641	0/1:13,0:12:63.96:64,0,627	0/0:14,0:14:20.87:0,21,826	0/0:6,0:6:18.06:0,18,771	0/1:12,0:12:1.81:2,0,739	0/1:1,5:6:49.38:183,0,49	0/0:17,0:17:1.10:0,1,1057	0/1:15,0:15:16.77:17,0,658	0/0:9,0:9:23.96:0,24,673	0/0:5,0:5:12.03:0,12,292	0/0:11,0:11:17.52:0,18,468	0/0:6,0:6:18.06:0,18,421	0/1:13,0:13:99:122,0,587	0/1:10,0:10:28.89:29,0,422	0/0:19,0:19:12.75:0,13,1155
chr10	43102622	.	TGC	T	77.69	PASS	AB=1.000;AC=6;AF=0.111;AN=54;BaseQRankSum=-0.646;DP=336;FS=14.884;HRun=0;HaplotypeScore=96.4262;InbreedingCoeff=0.4519;MQ=60.56;MQ0=0;MQRankSum=1.776;QD=1.47;ReadPosRankSum=-1.212;VQSLOD=0.5894;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:36.02:0,36,612	0/0:2,0:2:6.02:0,6,122	1/1:6,0:5:2.96:19,3,0	./.	1/1:4,6:10:14.34:115,14,0	0/0:12,0:12:32.64:0,33,316	0/0:13,0:13:28.72:0,29,203	0/1:31,0:31:46.77:47,0,227	0/0:6,0:6:15.05:0,15,225	0/0:17,0:17:30.65:0,31,404	0/0:5,0:5:12.03:0,12,133	0/0:10,0:10:30.05:0,30,401	0/0:14,0:14:14.08:0,14,174	0/0:10,0:10:21.07:0,21,313	0/0:12,1:12:4.82:0,5,274	0/0:15,0:15:37.37:0,37,422	0/0:8,0:8:24.08:0,24,468	0/0:18,0:18:53.76:0,54,542	0/1:6,0:6:18.61:19,0,38	0/0:18,1:19:30.70:0,31,525	0/0:18,1:19:19.82:0,20,422	0/0:11,0:11:25.95:0,26,319	0/0:9,0:9:12:0,12,161	0/0:14,0:14:23.94:0,24,294	0/0:6,0:6:18.05:0,18,193	0/0:14,0:14:22.52:0,23,296	0/0:13,0:13:26.45:0,26,276	0/0:19,1:20:31.71:0,32,524
chr10	43102623	.	G	GCATA	2938.48	PASS	AB=0.893;AC=25;AF=0.463;AN=54;BaseQRankSum=-9.644;DP=346;FS=0.885;HRun=0;HaplotypeScore=101.1185;InbreedingCoeff=0.2289;MQ=60.48;MQ0=0;MQRankSum=-0.858;QD=13.24;ReadPosRankSum=-3.493;VQSLOD=2.3096;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:26.51:0,27,298	0/0:2,0:2:6.02:0,6,65	1/1:5,0:5:3:25,3,0	./.	0/0:10,0:10:14.50:0,14,118	0/1:10,3:13:19.01:254,0,19	1/1:11,2:13:11.95:144,12,0	1/1:31,0:31:31.56:229,32,0	1/1:2,6:8:12.04:284,12,0	0/1:17,0:17:18.75:19,0,217	0/1:5,0:5:15.52:16,0,44	1/1:3,7:10:24.07:566,24,0	1/1:1,13:14:12.04:284,12,0	0/1:2,7:10:10.77:404,0,11	0/0:13,0:12:31.75:0,32,257	0/0:15,0:15:7.96:0,8,234	0/0:8,0:8:24.05:0,24,389	0/1:19,0:19:99:103,0,196	0/1:7,0:7:16.53:17,0,18	0/0:19,0:19:48.36:0,48,411	0/1:21,0:21:47.56:48,0,212	1/1:2,10:12:20.53:496,21,0	1/1:3,6:9:5.48:141,5,0	0/1:7,7:14:56.60:62,0,57	0/0:6,0:6:17.94:0,18,145	0/0:15,0:15:2.35:0,2,183	0/1:13,0:13:34.97:35,0,132	0/0:20,0:20:17.64:0,18,339
chr10	43102625	.	ATG	A	68.51	PASS	AB=1.000;AC=5;AF=0.093;AN=54;BaseQRankSum=-0.199;DP=354;FS=6.529;HRun=0;HaplotypeScore=100.5850;InbreedingCoeff=0.5246;MQ=60.40;MQ0=0;MQRankSum=4.036;QD=1.46;ReadPosRankSum=-2.523;VQSLOD=0.6188;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:34.21:0,34,387	0/0:2,0:2:6.02:0,6,67	1/1:6,0:5:2.07:15,2,0	./.	1/1:5,6:11:14.33:114,14,0	0/0:14,0:14:35.24:0,35,232	0/0:13,0:13:25.71:0,26,164	0/1:30,0:30:49.58:50,0,221	0/0:8,0:8:14.37:0,14,89	0/0:17,0:17:30.66:0,31,399	0/0:5,0:5:12.04:0,12,139	0/0:10,0:10:28.72:0,29,164	0/0:14,0:14:13.40:0,13,62	0/0:10,0:10:20.09:0,20,118	0/0:13,1:13:7.82:0,8,296	0/0:15,0:15:37.39:0,37,421	0/0:9,0:9:27.09:0,27,512	0/0:19,0:19:51.91:0,52,537	0/0:7,0:7:2.33:0,2,44	0/0:19,1:20:33.70:0,34,518	0/0:20,1:21:25.81:0,26,498	0/0:13,0:13:27.74:0,28,145	0/0:10,0:10:14.63:0,15,102	0/0:14,0:14:23.80:0,24,201	0/0:6,0:6:18.05:0,18,192	0/0:15,0:15:25.51:0,26,320	0/0:13,0:13:26.48:0,26,280	0/0:19,1:20:35.48:0,35,543
chr10	43103415	.	A	AT	5957.78	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-12.396;DP=613;FS=0.700;HRun=6;HaplotypeScore=59.0349;InbreedingCoeff=0.9985;MQ=80.28;MQ0=0;MQRankSum=-0.333;QD=32.38;ReadPosRankSum=2.185;VQSLOD=5.2448;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:59.33:0,59,576	0/0:7,0:7:18.04:0,18,184	0/0:20,0:20:39.90:0,40,401	0/0:14,0:14:26.02:0,26,323	0/0:23,0:23:63.14:0,63,643	1/1:3,24:27:72.23:906,72,0	1/1:1,12:13:36.12:453,36,0	0/0:31,0:31:72.12:0,72,716	1/1:1,13:14:33.11:415,33,0	0/0:29,0:29:81.17:0,81,816	0/0:26,0:26:75.09:0,75,739	1/1:2,21:23:60.19:748,60,0	1/1:4,21:25:51.16:642,51,0	1/1:0,16:16:45.10:548,45,0	0/0:24,0:24:66.12:0,66,660	0/0:24,0:24:66.15:0,66,673	0/0:23,0:23:66.15:0,66,673	0/0:22,0:22:53.33:0,53,527	0/0:21,0:21:57.09:0,57,563	0/0:30,0:30:66.13:0,66,668	0/0:20,0:20:45.06:0,45,445	1/1:2,16:18:48.11:586,48,0	1/1:0,26:26:72.23:906,72,0	1/1:1,21:22:60.19:755,60,0	0/0:25,0:25:72.16:0,72,729	0/0:18,0:18:48.11:0,48,490	0/0:32,0:32:90.18:0,90,904	0/0:18,0:18:54.12:0,54,551
chr10	43103539	.	AT	A	3474.07	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=1.450;DP=607;FS=5.563;HRun=11;HaplotypeScore=70.6451;InbreedingCoeff=0.9745;MQ=73.63;MQ0=0;MQRankSum=-0.542;QD=19.41;ReadPosRankSum=1.533;VQSLOD=4.8720;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,20:24:50.93:419,51,0	1/1:0,7:7:17.98:148,18,0	0/0:14,0:15:21.97:0,22,183	0/0:13,0:12:21.02:0,21,210	0/0:35,0:35:81.19:0,81,855	0/0:20,0:20:32.57:0,33,544	0/0:12,1:13:5.41:0,5,254	0/0:6,0:29:66.03:0,66,353	0/0:22,1:23:37.99:0,38,584	1/1:4,20:24:59.89:486,60,0	1/1:3,21:24:56.89:466,57,0	0/0:18,0:18:54.13:0,54,573	0/0:23,1:24:65.06:0,65,686	0/0:17,1:18:20.44:0,20,413	1/1:6,23:29:27.92:436,28,0	0/0:5,0:32:68.32:0,68,350	0/0:21,0:22:60.02:0,60,621	1/1:3,17:20:15.96:337,16,0	0/0:6,0:26:59.49:0,59,354	0/0:1,0:21:43.29:0,43,223	0/0:0,0:11:28.41:0,28,142	0/0:28,1:29:53.54:0,54,765	0/0:20,0:20:57.14:0,57,607	0/0:12,0:12:27.07:0,27,288	1/1:0,25:25:68.92:567,69,0	1/1:1,25:26:74.91:616,75,0	0/0:4,0:33:62.68:0,63,318	0/0:2,0:14:31.59:0,32,172
chr10	43103883	.	AAT	A	9185.14	PASS	AB=0.522;AC=31;AF=0.554;AN=56;BaseQRankSum=-4.187;DP=608;FS=6.772;HRun=0;HaplotypeScore=91.7861;InbreedingCoeff=0.9366;MQ=75.45;MQ0=7;MQRankSum=-0.211;QD=28.00;ReadPosRankSum=2.485;VQSLOD=6.4201;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,0:31:48.20:354,48,0	1/1:0,0:12:35.76:260,36,0	0/0:36,0:14:29.04:0,29,263	0/0:23,0:13:17.47:0,17,136	1/1:0,22:22:62.73:721,63,0	0/0:27,0:27:58.03:0,58,688	0/0:15,0:15:30.03:0,30,320	1/1:0,23:23:68.89:780,69,0	0/0:20,0:20:42.11:0,42,517	1/1:1,25:26:73.95:819,74,0	1/1:0,20:20:55.90:603,56,0	0/0:31,0:31:81.15:0,81,928	0/0:12,0:12:21.03:0,21,223	0/0:25,0:25:48.07:0,48,526	1/1:1,19:20:41.94:551,42,0	1/1:0,29:28:66.22:902,66,0	0/0:19,0:19:57.13:0,57,884	1/1:0,17:17:36.12:492,36,0	1/1:0,17:17:50.89:523,51,0	1/1:2,21:23:62.83:730,63,0	1/1:0,14:14:30.05:386,30,0	0/0:21,0:21:57.10:0,57,668	0/0:24,0:24:56.98:0,57,635	0/0:27,0:27:60.16:0,60,731	0/1:1,11:12:7.29:255,0,7	1/1:1,32:33:90.50:1094,91,0	1/1:1,16:17:27.06:348,27,0	1/1:0,12:12:27.09:367,27,0
chr10	43103884	.	A	AT	3090.84	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-13.877;DP=610;FS=3.636;HRun=11;HaplotypeScore=104.3375;InbreedingCoeff=0.9809;MQ=75.41;MQ0=7;MQRankSum=-1.073;QD=15.15;ReadPosRankSum=1.754;VQSLOD=3.9733;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:35.52:0,36,108	0/0:12,0:12:24.02:0,24,72	0/0:36,0:14:13.16:0,13,91	0/0:23,0:13:14.96:0,15,84	0/0:22,0:22:41.64:0,42,141	1/1:5,22:27:37.59:468,38,0	1/1:5,10:15:17.83:164,18,0	0/0:23,0:23:38.26:0,38,121	1/1:4,17:21:15.43:311,15,0	0/0:26,0:26:48.30:0,48,158	0/0:20,0:20:40.38:0,40,143	1/1:11,21:32:45.88:505,46,0	1/1:4,8:13:11.82:103,12,0	1/1:5,20:25:33.07:331,33,0	0/0:20,0:20:31.54:0,32,100	0/0:29,0:28:48.84:0,49,150	0/0:19,0:19:47.73:0,48,358	0/0:17,0:17:26.64:0,27,82	0/0:17,0:17:31.94:0,32,104	0/0:23,0:23:43.67:0,44,144	0/0:14,0:14:20.12:0,20,63	1/1:2,18:21:51.64:462,52,0	1/1:1,21:23:47.92:466,48,0	1/1:3,23:27:35.13:494,35,0	0/0:12,0:12:19.08:0,19,73	0/0:32,0:33:62.42:0,62,201	0/0:17,0:17:19.98:0,20,61	0/0:12,0:12:20.13:0,20,62
chr10	43104074	.	AACACGCACAC	A	1163.69	PASS	AB=0.827;AC=6;AF=0.107;AN=56;BaseQRankSum=5.714;DP=515;FS=1.651;HRun=0;HaplotypeScore=200.4785;InbreedingCoeff=-0.1313;MQ=63.91;MQ0=1;MQRankSum=-4.553;QD=13.69;ReadPosRankSum=-0.074;VQSLOD=2.7731;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:27.05:0,27,1094	0/0:13,0:13:22.04:0,22,818	0/0:8,0:7:18.06:0,18,456	0/0:22,0:20:41.13:0,41,1537	0/0:18,0:18:17.37:0,17,788	0/0:17,0:17:44.74:0,45,2039	0/0:28,0:27:63.06:0,63,3051	0/0:30,0:30:82.14:0,82,3285	0/0:17,0:17:31.96:0,32,1408	0/1:11,5:16:34.67:524,0,35	0/1:10,3:13:14.90:15,0,56	0/0:15,0:15:32.85:0,33,1450	0/0:12,0:12:33.11:0,33,1455	0/0:18,0:18:38.62:0,39,1926	0/1:14,3:17:19.04:19,0,36	0/0:10,0:10:12.03:0,12,429	0/0:30,0:30:90.26:0,90,4111	0/1:11,2:13:33.40:328,0,33	0/0:30,0:30:81.27:0,81,3496	0/0:14,0:14:15.05:0,15,484	0/0:37,0:37:30.40:0,30,856	0/0:11,0:11:23.72:0,24,1171	0/0:7,0:7:17.70:0,18,733	0/0:31,0:30:35.42:0,35,1471	0/1:14,1:15:45.12:45,0,46	0/1:7,4:11:43.81:357,0,44	0/0:10,0:10:5.96:0,6,248	0/0:7,0:7:6:0,6,140
chr10	43104085	.	A	ACGCGCG	1326.13	PASS	AB=0.923;AC=17;AF=0.315;AN=54;BaseQRankSum=-1.237;DP=536;FS=2.244;HRun=0;HaplotypeScore=186.9586;InbreedingCoeff=0.3170;MQ=54.55;MQ0=2;MQRankSum=-5.275;QD=5.55;ReadPosRankSum=-5.676;VQSLOD=0.9626;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:16,0:43:11.70:12,0,15	0/0:15,0:16:1.28:0,1,4	0/0:7,0:4:3.01:0,3,65	0/0:13,0:10:2.04:0,2,6	0/0:10,0:21:0.47:0,0,3	0/1:18,0:18:17.80:18,0,458	0/0:28,0:26:44.70:0,45,952	1/1:36,0:35:54.21:592,54,0	0/1:22,0:22:24.52:25,0,363	0/0:13,0:14:20.56:0,21,263	1/1:12,0:12:2.47:19,2,0	0/1:13,0:13:8.37:8,0,336	0/0:19,0:20:27.09:0,27,446	0/1:22,0:22:6.98:7,0,438	1/1:21,0:20:0.14:0,0,0	0/0:6,4:10:5.98:0,6,57	0/0:30,0:30:66.20:0,66,1230	0/0:12,0:12:27.03:0,27,407	1/1:26,1:27:38.98:607,39,0	./.	0/0:14,18:32:1.41:0,1,3	0/0:12,0:11:18.05:0,18,271	0/0:11,0:10:6.02:0,6,113	0/0:31,0:30:10.63:0,11,190	0/0:11,0:11:3.45:0,3,21	0/0:10,0:10:23.57:0,24,283	1/1:6,7:14:2.47:70,2,0	1/1:1,10:11:6.02:120,6,0
chr10	43104087	.	G	GCACA	408.51	PASS	AB=0.991;AC=17;AF=0.304;AN=56;BaseQRankSum=8.197;DP=533;FS=0.674;HRun=0;HaplotypeScore=177.8510;InbreedingCoeff=0.1555;MQ=52.50;MQ0=3;MQRankSum=-7.074;QD=2.55;ReadPosRankSum=-5.199;VQSLOD=1.0857;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:18.16:0,18,167	0/1:15,0:15:9.48:9,0,57	0/1:7,0:4:26.94:89,0,27	0/1:9,0:7:21.89:22,0,107	0/0:21,0:21:14.59:0,15,186	0/0:17,0:17:36.52:0,37,629	0/0:30,0:28:21.40:0,21,1037	0/0:38,0:37:76.23:0,76,866	0/0:23,0:23:16.40:0,16,460	0/1:13,0:13:9.39:164,0,9	1/1:8,4:12:3.01:70,3,0	0/1:15,0:14:11.85:12,0,464	0/0:20,0:20:12.13:0,12,521	0/0:21,0:21:16.07:0,16,634	1/1:20,1:20:2.85:72,3,0	0/1:10,0:10:10.31:10,0,110	0/0:30,0:30:76.69:0,77,1406	0/1:11,1:12:2.97:3,0,29	0/0:27,0:27:58.17:0,58,678	0/0:18,0:17:5.98:0,6,59	0/0:32,0:32:14.98:0,15,152	0/0:11,0:10:21.05:0,21,404	0/0:10,0:9:11.97:0,12,188	0/0:32,0:31:5.61:0,6,396	1/1:9,0:10:2.99:24,3,0	1/1:10,0:9:8.17:79,8,0	0/1:14,0:14:1.66:2,0,81	0/1:11,0:11:4.06:4,0,16
chr10	43104097	.	G	GCACACA	1732.86	PASS	AB=0.945;AC=32;AF=0.593;AN=54;BaseQRankSum=5.973;DP=545;FS=6.517;HRun=0;HaplotypeScore=183.5782;InbreedingCoeff=-0.1210;MQ=44.80;MQ0=5;MQRankSum=-4.771;QD=3.88;ReadPosRankSum=-6.218;VQSLOD=0.0681;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:38,0:38:2.54:24,3,0	0/1:15,0:15:16.24:85,0,16	0/0:4,0:1:3.01:0,3,35	./.	1/1:22,0:22:3.45:73,3,0	0/1:17,1:18:99:175,0,271	0/1:32,0:30:1.63:2,0,536	0/1:45,0:44:99:136,0,271	0/1:24,0:24:50.60:51,0,245	1/1:12,0:11:11.72:179,12,0	1/1:12,0:12:3.01:70,3,0	0/1:18,1:24:99:103,0,185	0/1:16,5:23:32.97:33,0,172	0/1:14,0:17:60.76:61,0,255	1/1:24,0:22:6:76,6,0	1/1:7,0:7:5.95:55,6,0	0/0:30,0:30:61.68:0,62,1176	1/1:17,0:17:1.64:206,2,0	0/1:17,0:17:60.24:60,0,65	0/0:14,0:13:3.01:0,3,43	1/1:26,0:26:2.99:25,3,0	0/1:15,0:14:76.85:103,0,77	0/1:13,0:10:14.98:15,0,61	0/0:31,0:30:9.49:0,9,130	1/1:16,0:15:8.89:148,9,0	1/1:16,0:13:9.65:159,10,0	0/0:13,0:13:5.50:0,6,54	0/1:13,0:13:16.70:51,0,17
chr10	43104103	.	G	GCACACACACACA	4103.06	PASS	AB=1.000;AC=47;AF=0.904;AN=52;BaseQRankSum=0.424;DP=545;FS=0.000;HRun=0;HaplotypeScore=213.6946;InbreedingCoeff=0.3239;MQ=43.10;MQ0=7;MQRankSum=-3.446;QD=8.27;ReadPosRankSum=-3.499;VQSLOD=1.9516;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:37,0:36:5.03:72,5,0	1/1:14,0:14:3.48:78,3,0	./.	./.	1/1:20,0:20:2.67:97,3,0	1/1:18,0:18:12.04:387,12,0	1/1:23,1:34:2.74:76,3,0	1/1:42,0:40:44.41:576,44,0	1/1:15,6:25:5.91:191,6,0	1/1:14,0:13:17.42:312,17,0	1/1:12,0:12:3.01:102,3,0	1/1:24,1:24:11.05:186,11,0	1/1:22,0:22:9:134,9,0	1/1:17,0:17:3.01:158,3,0	1/1:28,0:26:14.85:143,15,0	1/1:9,0:9:8.12:90,8,0	0/0:18,0:25:32.61:0,33,1090	1/1:18,0:18:22.17:360,22,0	1/1:17,0:16:19.36:148,19,0	0/0:12,0:11:3:0,3,25	1/1:23,0:24:6.22:76,6,0	1/1:13,0:12:12.03:221,12,0	1/1:12,0:9:3.01:48,3,0	1/1:32,0:32:3.64:27,4,0	1/1:17,0:16:9.39:290,9,0	1/1:17,0:14:18.78:246,19,0	0/1:14,0:14:2.47:10,0,2	1/1:12,0:11:8.88:75,9,0
chr10	43104109	.	A	ACACACC	635.41	PASS	AB=0.981;AC=19;AF=0.339;AN=56;BaseQRankSum=4.948;DP=566;FS=17.692;HRun=0;HaplotypeScore=175.8008;InbreedingCoeff=-0.3188;MQ=42.54;MQ0=7;MQRankSum=-3.698;QD=1.90;ReadPosRankSum=1.776;VQSLOD=1.9650;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:38,1:38:20.76:115,0,21	0/1:9,4:14:29.24:71,0,29	0/0:8,0:5:2.98:0,3,22	0/0:13,0:6:10.26:0,10,99	0/1:23,0:23:35.99:36,0,62	0/1:20,0:20:99:134,0,142	0/0:33,0:31:11.05:0,11,224	0/0:41,0:39:69.16:0,69,491	0/1:25,0:25:52.35:52,0,124	0/1:14,0:13:56.21:56,0,82	1/1:13,0:13:2.84:53,3,0	0/1:28,0:27:11.54:12,0,138	0/1:21,0:21:26.07:26,0,68	0/1:17,0:17:39.37:39,0,117	0/1:28,0:26:27.49:27,0,35	0/1:11,0:11:9.94:10,0,41	0/0:27,0:27:68.29:0,68,978	0/1:19,0:19:17.38:17,0,163	0/1:15,0:14:10.54:11,0,164	0/0:12,0:11:3:0,3,25	0/0:25,0:25:5.66:0,6,50	0/1:13,0:12:36.13:36,0,60	0/0:13,0:10:3.46:0,3,25	0/0:34,0:33:7.21:0,7,52	1/1:17,0:16:8.54:84,9,0	0/1:18,0:15:9.16:9,0,80	0/0:14,0:14:8.68:0,9,74	0/0:11,0:10:4:0,4,23
chr10	43104582	.	TA	T	3877.76	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=4.703;DP=679;FS=4.608;HRun=11;HaplotypeScore=109.5298;InbreedingCoeff=0.9704;MQ=67.72;MQ0=1;MQRankSum=-0.794;QD=18.38;ReadPosRankSum=4.173;VQSLOD=3.7010;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:98.89:0,99,1018	0/0:10,0:10:27.02:0,27,264	0/0:9,0:7:5.23:0,5,83	0/0:15,0:12:9.54:0,10,96	0/0:37,0:37:80.62:0,81,911	1/1:4,30:35:79.93:646,80,0	1/1:2,8:10:14.97:123,15,0	0/0:27,0:27:60.11:0,60,614	1/1:4,25:29:59.88:493,60,0	0/0:39,0:38:87.03:0,87,895	0/0:18,0:18:54.14:0,54,575	1/1:3,27:30:71.90:591,72,0	1/1:7,26:33:62.91:517,63,0	1/1:0,21:21:56.93:468,57,0	0/0:27,0:27:66.17:0,66,704	0/0:22,0:22:36.88:0,37,548	0/0:26,0:27:65.96:0,66,668	0/0:18,0:18:39.09:0,39,412	0/0:20,0:20:49.04:0,49,539	0/0:37,0:38:99:0,99,1008	0/0:26,0:26:59.16:0,59,605	1/1:1,12:13:32.95:270,33,0	1/1:3,22:26:61.96:499,62,0	1/1:0,14:14:32.96:271,33,0	0/0:29,1:30:62.36:0,62,838	0/0:28,0:28:63.13:0,63,657	0/0:25,0:24:66.06:0,66,669	0/0:15,0:15:33.06:0,33,339
chr10	43106429	.	T	TC	21228.83	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=4.078;DP=591;FS=0.522;HRun=3;HaplotypeScore=113.9566;InbreedingCoeff=0.9938;MQ=82.37;MQ0=0;MQRankSum=-6.300;QD=39.98;ReadPosRankSum=3.053;VQSLOD=3.7343;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,36:36:99:1542,102,0	1/1:0,5:5:15.05:226,15,0	0/0:12,0:12:33.02:0,33,410	0/0:23,0:23:55.74:0,56,668	1/1:0,24:24:60.13:855,60,0	1/1:0,20:20:57.19:863,57,0	1/1:0,22:22:60.20:899,60,0	1/1:0,21:21:60.64:886,61,0	1/1:1,16:17:48.16:721,48,0	1/1:0,20:20:60.19:905,60,0	1/1:2,13:15:36.11:522,36,0	1/1:1,26:27:72.24:1099,72,0	1/1:0,17:17:44.99:672,45,0	1/1:0,28:28:75.25:1135,75,0	1/1:1,25:26:57.19:854,57,0	1/1:0,25:25:72.24:1100,72,0	0/0:25,0:25:75.20:0,75,1009	1/1:0,21:21:51.17:780,51,0	1/1:0,16:16:48.08:686,48,0	1/1:0,17:17:48.16:712,48,0	1/1:0,33:33:68.98:1018,69,0	1/1:0,18:18:45.15:682,45,0	1/1:0,13:13:39.13:582,39,0	1/1:0,27:27:72.24:1095,72,0	1/1:0,32:32:87.29:1312,87,0	1/1:0,20:20:60.19:894,60,0	1/1:1,18:19:51.17:780,51,0	1/1:0,12:12:27.09:410,27,0
chr10	43106684	.	TAGG	T	8073.65	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=15.463;DP=719;FS=16.163;HRun=0;HaplotypeScore=120.5938;InbreedingCoeff=0.9992;MQ=84.98;MQ0=0;MQRankSum=-4.527;QD=44.36;ReadPosRankSum=1.397;VQSLOD=5.7676;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,108,2313	0/0:8,0:8:21.06:0,21,440	0/0:27,0:27:74.89:0,75,1546	0/0:21,0:21:60.16:0,60,1187	1/1:1,31:32:78.27:1326,78,0	0/0:20,0:20:60.14:0,60,1289	0/0:28,0:28:84.25:0,84,1851	0/0:49,0:49:99:0,132,2899	0/0:21,0:21:60.21:0,60,1381	1/1:1,22:23:69.18:1142,69,0	1/1:0,20:20:57.20:967,57,0	0/0:18,0:18:54.17:0,54,1140	0/0:30,0:30:87.29:0,87,1944	0/0:29,0:29:84.26:0,84,1818	1/1:1,30:31:72.25:1226,72,0	0/0:26,0:26:78.27:0,78,1774	0/0:32,0:32:93.30:0,93,2096	1/1:1,19:20:51.17:869,51,0	0/0:26,0:26:75.22:0,75,1542	0/0:30,0:30:87.30:0,87,1983	0/0:23,0:23:66.22:0,66,1413	0/0:32,0:32:90.28:0,90,1979	0/0:22,0:22:66.23:0,66,1521	0/0:24,0:24:72.24:0,72,1595	1/1:0,27:27:72.25:1225,72,0	1/1:1,28:29:84.19:1318,84,0	0/0:21,0:20:63.22:0,63,1451	0/0:13,0:13:36.12:0,36,827
chr10	43107072	.	C	CAA	4671.71	PASS	AB=1.000;AC=48;AF=0.857;AN=56;BaseQRankSum=-1.786;DP=438;FS=40.900;HRun=11;HaplotypeScore=119.4850;InbreedingCoeff=0.4995;MQ=64.38;MQ0=2;MQRankSum=-2.309;QD=12.83;ReadPosRankSum=-4.530;VQSLOD=-0.7482;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:30:60.27:509,60,0	1/1:4,0:4:9.02:96,9,0	0/0:34,0:13:3.28:0,3,108	0/0:17,0:8:14.79:0,15,105	0/0:23,0:23:13.60:0,14,119	1/1:12,0:12:27.98:286,28,0	1/1:8,0:8:11.97:98,12,0	1/1:15,0:15:18.42:93,18,0	1/1:8,1:9:11.99:121,12,0	1/1:9,0:9:12.86:140,13,0	1/1:20,0:20:11.44:362,11,0	1/1:4,7:11:4.21:23,4,0	1/1:1,3:13:3.01:35,3,0	0/1:12,0:12:3.25:174,0,3	1/1:20,1:21:47.57:432,48,0	1/1:23,0:23:43.55:337,44,0	0/1:20,0:20:39.67:40,0,94	1/1:8,0:8:17.93:157,18,0	1/1:14,0:13:17.59:97,18,0	1/1:25,0:25:31.20:230,31,0	1/1:7,0:7:5.65:53,6,0	1/1:6,9:16:17.78:117,18,0	1/1:14,1:15:27.67:284,28,0	1/1:14,0:14:26.69:258,27,0	1/1:12,0:12:23.53:235,24,0	1/1:7,0:7:20.42:152,20,0	1/1:25,0:24:23.49:285,23,0	1/1:13,0:14:0.82:59,1,0
chr10	43107083	.	AGGG	A	657.82	PASS	AB=0.962;AC=16;AF=0.308;AN=52;BaseQRankSum=4.107;DP=431;FS=9.662;HRun=13;HaplotypeScore=98.0201;InbreedingCoeff=0.5204;MQ=70.95;MQ0=3;MQRankSum=-3.615;QD=4.80;ReadPosRankSum=0.404;VQSLOD=-0.7073;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:29:29.47:135,29,0	0/1:4,0:4:0:0,0,0	0/0:40,0:17:17.48:0,17,372	0/0:33,0:17:15.20:0,15,130	1/1:4,18:22:17.65:448,18,0	0/0:11,0:11:18.06:0,18,254	0/0:5,0:11:18.06:0,18,282	0/0:13,0:13:3:0,3,25	0/0:4,0:9:9.03:0,9,157	1/1:6,0:6:5.30:24,5,0	1/1:17,0:17:11.94:54,12,0	./.	./.	0/0:10,0:10:18.06:0,18,302	0/1:18,0:18:32.02:65,0,32	0/0:22,0:23:19.96:0,20,270	0/0:19,0:24:18.06:0,18,279	1/1:9,0:9:2.86:17,3,0	0/1:9,1:10:22.15:22,0,55	0/0:16,0:18:12.02:0,12,171	0/0:10,0:10:12.81:0,13,155	0/0:13,0:13:5.76:0,6,110	0/0:13,0:15:6.01:0,6,76	0/0:15,0:15:15.52:0,16,248	1/1:11,0:11:3.19:39,3,0	0/1:10,0:10:11.16:18,0,11	0/0:20,0:20:18.02:0,18,222	0/0:10,0:10:20.14:0,20,219
chr10	43107092	.	GGGGGAC	G	2122.49	PASS	AC=14;AF=0.259;AN=54;BaseQRankSum=4.338;DP=377;FS=2.341;HRun=0;HaplotypeScore=85.3105;InbreedingCoeff=0.8829;MQ=69.94;MQ0=2;MQRankSum=-6.484;QD=24.12;ReadPosRankSum=3.796;VQSLOD=3.4202;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,14:20:34.84:658,35,0	./.	0/0:36,0:15:6.57:0,7,626	0/0:31,0:16:14.42:0,14,263	0/0:25,0:25:60.04:0,60,701	0/0:11,0:11:29.46:0,29,665	0/0:13,0:13:33.11:0,33,687	0/0:13,0:13:28.91:0,29,476	0/0:8,0:8:12.04:0,12,342	1/1:3,5:8:14.92:231,15,0	1/1:9,7:16:23.99:393,24,0	0/0:11,0:11:15.05:0,15,304	0/0:8,0:8:9.03:0,9,145	0/0:9,0:9:27.09:0,27,681	1/1:9,10:19:13.17:509,13,0	0/0:17,0:17:45.15:0,45,986	0/0:15,0:15:21.04:0,21,546	1/1:1,5:6:2.99:46,3,0	0/0:9,0:8:5.11:0,5,337	0/0:12,0:12:26.83:0,27,619	0/0:11,0:11:26.12:0,26,553	0/0:12,0:12:14.66:0,15,367	0/0:10,0:10:18.06:0,18,375	0/0:11,0:11:20.73:0,21,607	1/1:4,6:10:16.29:270,16,0	1/1:4,5:9:11.97:198,12,0	0/0:10,0:10:24.08:0,24,568	0/0:15,0:15:45.15:0,45,1000
chr10	43107093	.	GGGGAC	G	1881.44	PASS	AB=1.000;AC=15;AF=0.278;AN=54;BaseQRankSum=5.856;DP=368;FS=3.268;HRun=0;HaplotypeScore=78.8888;InbreedingCoeff=0.8105;MQ=71.68;MQ0=2;MQRankSum=-7.011;QD=15.94;ReadPosRankSum=2.874;VQSLOD=2.3797;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:17,3:20:35.62:584,36,0	./.	0/1:33,0:14:10.66:11,0,500	0/0:32,0:17:15.26:0,15,254	0/0:24,0:24:57.66:0,58,488	0/0:11,0:11:27.09:0,27,560	0/0:12,0:12:32.90:0,33,589	0/0:13,0:12:30.10:0,30,494	0/0:8,0:8:12.04:0,12,288	1/1:8,0:8:14.92:201,15,0	1/1:14,1:15:24:343,24,0	0/0:10,0:10:15.05:0,15,261	0/0:8,0:8:9.03:0,9,131	0/0:10,0:10:30.10:0,30,635	1/1:17,1:18:29.13:453,29,0	0/0:18,0:18:48.16:0,48,892	0/0:12,0:12:18.06:0,18,441	1/1:6,0:6:3:48,3,0	0/0:9,0:8:2.60:0,3,288	0/0:12,0:12:14.86:0,15,502	0/0:10,0:10:24.08:0,24,467	0/0:11,0:11:14.45:0,14,319	0/0:10,0:10:18.06:0,18,327	0/0:11,0:11:20.73:0,21,515	1/1:9,1:10:17.98:266,18,0	1/1:8,0:8:12.02:161,12,0	0/0:10,0:10:24.08:0,24,485	0/0:17,0:17:51.17:0,51,918
chr10	43107094	.	GGGAC	G	1578.90	PASS	AB=1.000;AC=15;AF=0.278;AN=54;BaseQRankSum=7.382;DP=359;FS=1.436;HRun=0;HaplotypeScore=73.3111;InbreedingCoeff=0.8242;MQ=72.20;MQ0=2;MQRankSum=-7.002;QD=14.10;ReadPosRankSum=2.596;VQSLOD=3.2558;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:19:36.11:434,36,0	./.	0/1:33,0:14:11.59:12,0,390	0/0:31,0:17:5.83:0,6,187	0/0:24,0:25:41.89:0,42,360	0/0:11,0:11:27.05:0,27,463	0/0:12,0:12:30.06:0,30,517	0/0:14,0:13:33.11:0,33,528	0/0:7,0:7:12.04:0,12,235	1/1:7,0:7:15.05:190,15,0	1/1:11,1:13:24.07:322,24,0	0/0:10,0:10:15.04:0,15,220	0/0:7,0:7:8.92:0,9,105	0/0:10,0:10:30.06:0,30,516	1/1:16,2:18:30.09:402,30,0	0/0:18,0:18:48.13:0,48,772	0/0:12,0:12:21.07:0,21,408	1/1:6,0:6:3.01:34,3,0	0/0:9,0:8:20.93:0,21,271	0/0:12,0:12:14.83:0,15,413	0/0:10,0:10:24.06:0,24,385	0/0:11,0:11:14.37:0,14,262	0/0:9,0:9:18.06:0,18,291	0/0:11,0:11:21.46:0,21,437	1/1:8,2:10:18.06:232,18,0	1/1:6,0:6:12.03:141,12,0	0/0:10,0:10:24.08:0,24,410	0/0:17,0:17:51.16:0,51,788
chr10	43107781	.	AC	A	5531.97	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-6.197;DP=726;FS=0.719;HRun=1;HaplotypeScore=101.5381;InbreedingCoeff=0.9980;MQ=88.92;MQ0=0;MQRankSum=-6.021;QD=39.23;ReadPosRankSum=2.819;VQSLOD=5.0707;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,120,1907	0/0:8,0:8:24.08:0,24,383	0/0:26,0:26:75.25:0,75,1161	0/0:28,0:28:84.28:0,84,1277	0/0:26,0:26:78.27:0,78,1243	0/0:30,0:30:90.31:0,90,1434	0/0:25,0:25:72.23:0,72,1110	0/0:31,0:31:93.32:0,93,1474	0/0:20,0:20:60.20:0,60,953	1/1:0,18:18:54.14:705,54,0	1/1:0,23:24:69.23:965,69,0	0/0:24,0:24:72.22:0,72,1116	0/0:32,0:32:96.28:0,96,1477	0/0:30,0:30:90.28:0,90,1382	1/1:0,29:29:81.27:1133,81,0	0/0:37,0:37:99:0,111,1744	0/0:26,0:26:78.21:0,78,1168	1/1:0,15:15:45.11:607,45,0	0/0:20,0:20:60.20:0,60,926	0/0:41,0:41:99:0,123,1928	0/0:25,0:25:72.23:0,72,1120	0/0:24,0:24:72.23:0,72,1122	0/0:19,0:19:57.19:0,57,910	0/0:33,0:33:96.33:0,96,1521	1/1:0,34:34:90.30:1259,90,0	1/1:0,21:21:63.19:862,63,0	0/0:34,0:34:99:0,102,1629	0/0:6,0:6:18.06:0,18,287
chr10	43110189	.	CGTGTGTAT	C	7412.72	PASS	AB=0.950;AC=39;AF=0.722;AN=54;BaseQRankSum=-5.667;DP=638;FS=10.074;HRun=0;HaplotypeScore=167.8364;InbreedingCoeff=0.1180;MQ=66.30;MQ0=17;MQRankSum=0.424;QD=14.15;ReadPosRankSum=3.878;VQSLOD=3.3548;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:37,0:36:86.68:684,87,0	1/1:11,0:11:29.92:241,30,0	0/0:38,0:20:18.41:0,18,251	0/0:37,0:17:30.99:0,31,226	0/1:13,0:13:99:120,0,154	1/1:4,0:16:6.02:122,6,0	1/1:16,0:16:32.81:271,33,0	1/1:23,0:23:53.91:460,54,0	0/1:7,0:20:41.59:55,0,42	1/1:5,18:23:48.30:441,48,0	./.	0/1:37,0:37:99:166,0,397	0/1:24,0:23:99:186,0,502	0/1:23,0:23:99:250,0,354	1/1:4,20:25:5.49:163,5,0	1/1:0,0:24:27.03:562,27,0	0/0:34,0:32:64.97:0,65,1706	0/1:21,1:21:19.96:459,0,20	1/1:14,0:14:32.99:290,33,0	1/1:1,0:9:3.01:58,3,0	1/1:58,0:57:99:907,111,0	0/1:14,0:14:54.76:167,0,55	0/1:12,0:12:99:114,0,171	0/1:36,0:36:99:249,0,945	1/1:20,0:19:53.89:446,54,0	1/1:21,0:19:50.76:426,51,0	1/1:18,0:21:56.37:503,56,0	1/1:3,0:3:8.98:72,9,0
chr10	43110949	.	A	AC	5647.59	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-12.598;DP=673;FS=0.336;HRun=7;HaplotypeScore=65.6141;InbreedingCoeff=0.9999;MQ=65.57;MQ0=0;MQRankSum=-0.326;QD=30.04;ReadPosRankSum=-0.016;VQSLOD=5.0586;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,24:29:63.19:761,63,0	1/1:2,13:15:39.12:471,39,0	0/0:25,0:24:63.01:0,63,586	0/0:17,0:16:33.02:0,33,310	0/0:29,0:29:81.11:0,81,774	0/0:30,0:30:87.14:0,87,840	0/0:23,0:23:53.99:0,54,498	0/0:26,0:26:63.08:0,63,603	0/0:19,0:19:48.07:0,48,463	1/1:1,20:21:60.16:703,60,0	1/1:1,17:18:45.14:544,45,0	0/0:26,0:26:66.10:0,66,637	0/0:20,0:20:54.07:0,54,519	0/0:18,0:18:48.07:0,48,462	1/1:2,43:45:99:1405,117,0	0/0:28,0:28:72.10:0,72,690	0/0:29,0:29:87.14:0,87,839	1/1:3,15:18:45:522,45,0	0/0:16,0:16:33.04:0,33,318	0/0:32,0:32:81.11:0,81,781	0/0:20,0:20:54.08:0,54,521	0/0:35,0:35:81.10:0,81,775	0/0:24,0:24:60.10:0,60,579	0/0:27,0:27:75.12:0,75,724	1/1:2,20:22:54.17:652,54,0	1/1:3,17:20:51.11:590,51,0	0/0:28,0:28:69.09:0,69,665	0/0:13,0:13:39.06:0,39,377
chr10	43111853	.	AT	A	1551.54	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.561;DP=713;FS=0.000;HRun=3;HaplotypeScore=102.0035;InbreedingCoeff=0.9999;MQ=82.38;MQ0=0;MQRankSum=-4.276;QD=31.03;ReadPosRankSum=1.470;VQSLOD=3.2098;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,34:35:99:1227,99,0	1/1:0,15:15:36.11:446,36,0	0/0:15,0:15:45.15:0,45,630	0/0:24,0:24:53.11:0,53,788	0/0:38,0:38:99:0,108,1554	0/0:32,0:32:93.30:0,93,1320	0/0:25,0:25:75.24:0,75,1061	0/0:37,0:37:99:0,111,1584	0/0:24,0:24:72.23:0,72,1020	0/0:24,0:24:72.23:0,72,1016	0/0:15,0:15:42.13:0,42,588	0/0:27,0:27:78.21:0,78,1077	0/0:24,0:24:69.23:0,69,994	0/0:21,0:21:63.19:0,63,888	0/0:30,0:30:90.29:0,90,1274	0/0:18,0:18:54.18:0,54,778	0/0:26,0:26:75.25:0,75,1080	0/0:17,0:17:51.13:0,51,710	0/0:20,0:20:60.18:0,60,844	0/0:43,0:43:99:0,129,1792	0/0:26,0:26:72.22:0,72,1011	0/0:34,0:34:90.29:0,90,1277	0/0:22,0:22:60.20:0,60,864	0/0:16,0:16:48.16:0,48,691	0/0:32,0:32:93.31:0,93,1339	0/0:26,0:26:78.26:0,78,1120	0/0:28,0:28:84.28:0,84,1209	0/0:19,0:19:57.16:0,57,783
chr10	43112161	.	G	GA	11626.92	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=20.774;DP=653;FS=6.428;HRun=2;HaplotypeScore=139.1695;InbreedingCoeff=0.9996;MQ=87.26;MQ0=0;MQRankSum=-12.873;QD=36.22;ReadPosRankSum=3.669;VQSLOD=3.8231;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,24:25:60.20:796,60,0	1/1:0,10:10:30.10:400,30,0	0/0:22,0:22:66.19:0,66,900	0/0:28,0:29:81.73:0,82,1107	0/0:31,0:31:93.30:0,93,1277	0/0:27,0:27:81.27:0,81,1133	0/0:24,0:24:69.23:0,69,963	1/1:2,37:39:99:1491,112,0	0/0:21,0:21:63.21:0,63,876	0/0:22,0:22:63.19:0,63,861	0/0:25,0:25:72.23:0,72,983	1/1:1,25:26:71.80:957,72,0	1/1:1,20:21:59.76:793,60,0	1/1:2,24:26:68.77:928,69,0	0/0:29,0:29:87.29:0,87,1212	1/1:2,23:25:30.74:892,31,0	0/0:33,0:33:99:0,99,1380	0/0:9,0:9:27.09:0,27,377	1/1:0,14:14:42.14:565,42,0	1/1:1,21:22:66.20:860,66,0	1/1:5,24:29:73.91:928,74,0	1/1:0,23:23:69.17:884,69,0	1/1:2,13:15:38.29:517,38,0	1/1:0,11:11:27:338,27,0	0/0:28,0:28:84.27:0,84,1156	0/0:32,0:32:96.32:0,96,1337	1/1:1,21:22:61.44:793,61,0	1/1:1,12:13:36.12:485,36,0
chr10	43112502	.	GT	G	1231.14	PASS	AB=0.756;AC=22;AF=0.393;AN=56;BaseQRankSum=-0.602;DP=665;FS=2.523;HRun=16;HaplotypeScore=75.8275;InbreedingCoeff=0.4916;MQ=65.24;MQ0=22;MQRankSum=2.183;QD=4.70;ReadPosRankSum=3.688;VQSLOD=1.8596;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,1:25:36:120,36,0	1/1:2,1:14:21.43:72,21,0	0/0:84,0:27:9.25:0,9,103	0/0:73,0:19:10.36:0,10,71	0/0:10,0:28:40.84:0,41,230	1/1:2,12:14:7.23:154,7,0	0/1:6,7:14:14.45:31,0,14	0/0:13,0:25:48.53:0,49,261	0/1:7,7:14:23.06:84,0,23	0/0:16,2:18:29.68:0,30,223	0/0:22,4:27:24.75:0,25,363	1/1:4,15:19:13.10:188,13,0	0/1:6,9:17:22.72:92,0,23	1/1:7,12:19:23.43:143,23,0	0/1:17,4:21:12.12:12,0,227	0/0:5,0:14:8.68:0,9,129	0/0:17,2:20:2.72:0,3,219	0/1:17,5:19:6.08:6,0,275	0/0:11,0:17:32.01:0,32,190	0/0:10,0:20:32.43:0,32,177	0/0:7,0:15:8.52:0,9,43	1/1:7,8:15:23.38:140,23,0	1/1:4,8:13:4.08:108,4,0	1/1:4,19:23:44.09:269,44,0	0/0:22,0:23:44.34:0,44,329	0/1:29,1:30:5.06:5,0,304	0/0:7,0:16:17.16:0,17,90	0/0:7,0:15:22.68:0,23,113
chr10	43112739	.	AG	A	6876.53	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=7.101;DP=495;FS=2.070;HRun=5;HaplotypeScore=250.4161;InbreedingCoeff=0.9863;MQ=51.55;MQ0=0;MQRankSum=-0.485;QD=26.76;ReadPosRankSum=4.107;VQSLOD=1.9183;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,22:25:56.02:613,56,0	1/1:2,12:14:39.07:418,39,0	0/0:7,0:5:8.76:0,9,92	0/0:12,0:10:17.23:0,17,160	0/0:26,0:26:60.97:0,61,754	0/0:15,0:15:39.13:0,39,497	0/0:19,0:19:45.11:0,45,543	1/1:9,14:22:35.61:398,36,0	0/0:11,0:11:27.08:0,27,335	0/0:22,0:22:66.10:0,66,808	0/0:24,0:24:66.21:0,66,837	1/1:1,20:21:57.15:629,57,0	1/1:1,20:21:63.11:681,63,0	1/1:2,18:20:54.12:585,54,0	0/0:15,0:15:42:0,42,499	1/1:1,14:15:42.06:451,42,0	0/0:16,0:16:33.11:0,33,429	0/0:21,0:21:51.14:0,51,648	1/1:7,8:15:24.06:266,24,0	1/1:2,17:19:51.14:561,51,0	1/1:2,4:6:14.95:138,15,0	1/1:2,16:18:49.93:518,50,0	1/1:0,16:16:45.12:493,45,0	1/1:2,13:15:30.08:331,30,0	0/0:21,0:20:60.06:0,60,728	0/0:29,0:27:78.20:0,78,996	1/1:2,19:21:54.14:594,54,0	1/1:2,6:8:18.05:199,18,0
chr10	43113427	.	T	TA	5440.03	PASS	AB=1.000;AC=31;AF=0.554;AN=56;BaseQRankSum=11.403;DP=507;FS=6.358;HRun=0;HaplotypeScore=77.4289;InbreedingCoeff=0.9172;MQ=65.46;MQ0=8;MQRankSum=0.752;QD=20.61;ReadPosRankSum=1.376;VQSLOD=6.5842;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,19:25:41.64:426,42,0	1/1:2,10:12:12.82:248,13,0	0/0:14,0:8:13.87:0,14,121	0/1:10,0:6:4.24:4,0,26	0/0:25,0:25:75.25:0,75,1037	0/0:15,0:15:42.10:0,42,560	0/0:13,0:13:35.99:0,36,450	1/1:8,21:29:33.54:517,34,0	0/0:15,0:15:45.10:0,45,584	0/0:25,0:25:72.23:0,72,985	0/0:23,0:22:63.20:0,63,861	1/1:2,10:12:16.94:194,17,0	1/1:4,18:22:42.57:476,43,0	1/1:2,9:11:27.05:288,27,0	0/0:19,0:19:54.16:0,54,712	1/1:0,13:13:27.07:294,27,0	0/0:27,0:27:75.22:0,75,1020	0/0:26,0:26:69.19:0,69,932	1/1:4,27:29:38.67:818,39,0	1/1:10,17:27:50.44:600,50,0	1/1:1,17:17:42.10:452,42,0	1/1:0,9:9:13.39:179,13,0	1/1:2,7:8:24.02:256,24,0	1/1:5,6:11:4.64:149,5,0	0/0:18,0:18:54.18:0,54,750	0/0:23,0:23:69.23:0,69,961	1/1:2,14:15:29.52:309,30,0	1/1:0,8:8:21.05:230,21,0
chr10	43114776	.	G	GT	11392.20	PASS	AC=28;AF=0.519;AN=54;BaseQRankSum=-14.693;DP=524;FS=8.491;HRun=1;HaplotypeScore=50.7638;InbreedingCoeff=0.9939;MQ=77.12;MQ0=0;MQRankSum=-0.066;QD=40.11;ReadPosRankSum=0.002;VQSLOD=4.8273;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,7:8:21.07:315,21,0	1/1:0,11:11:27.09:404,27,0	0/0:16,0:16:48.15:0,48,598	0/0:9,0:9:21.07:0,21,271	0/0:34,0:34:99:0,102,1309	0/0:12,0:12:33.10:0,33,409	0/0:4,0:4:12.04:0,12,147	1/1:1,36:37:99:1574,108,0	0/0:15,0:15:42.13:0,42,519	0/0:29,0:29:78.25:0,78,1012	0/0:27,0:27:75.23:0,75,958	1/1:0,18:18:48.16:719,48,0	1/1:2,12:14:33.11:494,33,0	1/1:0,15:15:42.14:629,42,0	0/0:14,0:14:42.12:0,42,528	1/1:0,20:20:60.20:899,60,0	0/0:13,0:13:39.13:0,39,506	0/0:19,0:19:54.12:0,54,653	1/1:0,23:23:69.21:1012,69,0	1/1:1,28:29:81.27:1213,81,0	1/1:0,10:10:24.08:360,24,0	1/1:0,14:14:33.11:494,33,0	1/1:1,33:34:84.15:1257,84,0	1/1:0,12:12:36.12:539,36,0	0/0:16,0:16:45.15:0,45,583	0/0:26,0:26:75.24:0,75,964	1/1:2,37:39:99:1481,99,0	./.
chr10	43115064	.	G	GTTGAAGTATACAGA	63372.36	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-6.233;DP=621;FS=5.727;HRun=0;HaplotypeScore=160.9439;InbreedingCoeff=0.9334;MQ=70.10;MQ0=0;MQRankSum=-11.905;QD=114.39;ReadPosRankSum=1.245;VQSLOD=4.7243;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,3:13:21.07:1274,21,0	1/1:1,4:12:14.97:883,15,0	0/0:19,0:19:48.16:0,48,1474	0/0:12,0:12:30.08:0,30,777	0/0:27,0:27:81.28:0,81,3095	1/1:8,13:31:60.21:4100,60,0	1/1:4,4:16:24.08:1577,24,0	1/1:16,3:27:75.24:3690,75,0	1/1:7,6:25:36.12:1864,36,0	1/1:7,9:27:72.23:4024,72,0	1/1:3,9:26:39.13:2437,39,0	1/1:6,16:31:60.21:3641,60,0	1/1:1,18:24:54.19:3803,54,0	1/1:3,5:18:24.08:1624,24,0	1/1:5,21:35:78.27:5040,78,0	1/1:6,14:37:60.20:3464,60,0	0/0:9,0:9:24.08:0,24,1024	1/1:6,4:16:24.08:1373,24,0	1/1:3,3:13:33.09:1553,33,0	1/1:7,12:26:51.17:3007,51,0	1/1:5,2:11:15.05:944,15,0	1/1:3,9:17:33.11:1916,33,0	1/1:7,17:32:72.13:4539,72,0	1/1:1,1:5:3.01:169,3,0	1/1:4,11:22:45.15:2790,45,0	1/1:7,15:33:87.28:4741,87,0	1/1:12,14:43:63.21:4079,63,0	1/1:0,4:12:12.04:841,12,0
chr10	43116118	.	CAA	C	4266	PASS	AB=0.580;AC=33;AF=0.589;AN=56;BaseQRankSum=-6.522;DP=483;FS=4.547;HRun=13;HaplotypeScore=77.2965;InbreedingCoeff=0.6656;MQ=59.73;MQ0=19;MQRankSum=-0.389;QD=14.51;ReadPosRankSum=2.399;VQSLOD=4.1027;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:11,30:43:47.35:740,47,0	1/1:2,2:4:5.99:58,6,0	0/0:21,0:12:29.77:0,30,327	0/0:8,0:4:5.47:0,5,97	0/0:11,1:15:2.97:0,3,321	0/0:9,0:20:36.39:0,36,178	0/0:4,1:20:1.23:0,1,65	1/1:6,18:24:50.98:494,51,0	0/1:6,0:13:2.86:3,0,40	0/0:7,0:16:32.19:0,32,154	0/0:6,1:18:1.24:0,1,65	1/1:2,9:12:23.79:230,24,0	1/1:6,13:21:35.65:379,36,0	1/1:3,9:11:18.01:174,18,0	0/1:5,2:24:13.57:14,0,114	1/1:6,7:12:20.98:204,21,0	0/0:24,0:26:37.48:0,37,789	0/0:8,0:14:22.70:0,23,179	1/1:8,15:21:44.97:436,45,0	1/1:4,8:11:24.03:233,24,0	1/1:5,6:9:17.96:174,18,0	1/1:2,5:7:14.85:130,15,0	1/1:5,8:13:26.50:227,27,0	1/1:6,14:17:29.98:291,30,0	0/1:1,1:8:14.85:15,0,23	0/0:11,1:24:20.16:0,20,204	1/1:6,13:20:41.27:356,41,0	1/1:2,4:6:5.95:108,6,0
chr10	43116338	.	AAT	A	936.45	PASS	AB=0.914;AC=13;AF=0.260;AN=50;BaseQRankSum=-1.764;DP=219;FS=10.433;HRun=0;HaplotypeScore=45.0864;InbreedingCoeff=0.4985;MQ=63.76;MQ0=6;MQRankSum=1.137;QD=11.85;ReadPosRankSum=2.310;VQSLOD=2.0767;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:7:0.88:0,1,2	0/0:2,0:2:3:0,3,26	0/0:9,0:5:4.68:0,5,23	0/0:20,0:8:6.85:0,7,51	0/0:1,0:6:6:0,6,53	0/0:3,0:9:9:0,9,79	0/0:1,0:1:3.01:0,3,36	0/0:40,0:34:41.11:0,41,355	0/0:3,0:7:5.99:0,6,50	1/1:1,2:3:6.02:75,6,0	1/1:3,1:3:6.02:75,6,0	0/0:0,0:4:12.01:0,12,106	0/0:1,0:5:9:0,9,80	0/0:2,0:3:3:0,3,26	1/1:2,4:6:12.04:150,12,0	./.	0/1:29,3:32:22.29:22,0,1238	1/1:4,9:12:30.06:359,30,0	0/0:4,0:4:5.98:0,6,59	0/0:4,0:4:0:0,0,0	./.	./.	0/0:0,0:1:3:0,3,26	0/0:2,0:4:1.06:0,1,23	1/1:6,6:12:15.05:184,15,0	1/1:3,6:9:18.06:225,18,0	0/0:7,0:7:5.97:0,6,58	0/0:5,0:5:3.46:0,3,25
chr10	43116348	.	T	TATATATATATAC	725.94	PASS	AB=1.000;AC=17;AF=0.340;AN=50;BaseQRankSum=3.223;DP=216;FS=2.660;HRun=0;HaplotypeScore=81.4485;InbreedingCoeff=0.2492;MQ=60.57;MQ0=6;MQRankSum=-4.562;QD=7.89;ReadPosRankSum=-0.641;VQSLOD=1.5813;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,1:6:3.01:60,3,0	1/1:0,2:4:3.01:182,3,0	0/0:11,0:5:5.84:0,6,35	0/0:18,0:6:0.36:0,0,18	0/0:6,0:6:4.90:0,5,31	0/1:9,0:9:9.92:134,0,10	0/1:2,0:2:18.94:39,0,19	0/1:40,0:34:72.60:297,0,73	1/1:6,0:6:3.01:37,3,0	0/0:2,0:2:6.02:0,6,170	0/0:4,0:3:8.90:0,9,87	0/0:4,0:4:12.03:0,12,166	0/0:7,0:7:15.01:0,15,170	0/0:1,0:1:0.47:0,0,1	0/1:5,0:5:0.54:1,0,176	./.	0/0:35,0:35:99:0,102,2373	0/0:13,0:13:39.02:0,39,689	0/1:4,0:4:13.99:14,0,21	1/1:3,0:3:3:25,3,0	./.	./.	0/0:1,0:1:3:0,3,27	0/0:3,0:3:3.48:0,3,49	0/0:10,0:10:17.99:0,18,334	0/0:6,0:6:5.41:0,5,190	1/1:7,0:7:5.91:38,6,0	1/1:6,0:6:5.93:41,6,0
chr10	43116353	.	A	ATATG	412.21	PASS	AB=1.000;AC=18;AF=0.333;AN=54;BaseQRankSum=4.528;DP=236;FS=0.834;HRun=0;HaplotypeScore=55.4015;InbreedingCoeff=-0.0823;MQ=60.68;MQ0=5;MQRankSum=-2.766;QD=2.99;ReadPosRankSum=1.201;VQSLOD=1.1914;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:7,0:7:12.44:12,0,32	0/1:6,0:6:24.73:25,0,40	0/0:9,0:3:4.66:0,5,22	0/1:15,0:6:6.99:7,0,57	0/1:7,0:7:36.93:90,0,37	0/1:9,0:9:32.92:90,0,33	0/1:3,0:3:12.44:12,0,20	0/1:47,0:41:99:212,0,348	1/1:5,0:5:3.01:35,3,0	0/0:3,0:3:6.02:0,6,77	0/0:5,0:4:8.68:0,9,72	0/1:5,0:5:0:1,0,0	0/0:6,0:6:5.43:0,5,49	0/1:1,0:1:0:0,0,0	0/0:6,0:6:2.15:0,2,96	0/0:3,0:3:5.99:0,6,50	0/0:35,0:35:99:0,105,1879	0/0:16,0:15:43.66:0,44,419	0/1:6,0:6:3.02:3,0,88	0/1:4,0:4:15.92:16,0,41	0/0:2,0:2:3:0,3,25	./.	0/1:1,0:1:0:0,0,0	0/1:2,0:2:0.20:0,0,0	0/0:7,0:7:17.99:0,18,180	0/0:6,0:6:17.47:0,17,139	1/1:4,4:9:2.48:18,2,0	0/1:9,0:9:22.87:23,0,77
chr10	43117006	.	T	TAG	906.60	PASS	AB=1.000;AC=4;AF=0.071;AN=56;BaseQRankSum=-5.808;DP=632;FS=5.481;HRun=0;HaplotypeScore=78.9000;InbreedingCoeff=0.5148;MQ=83.82;MQ0=0;MQRankSum=-1.732;QD=16.48;ReadPosRankSum=1.659;VQSLOD=3.3786;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:57.13:0,57,731	0/0:6,0:6:18.03:0,18,223	0/0:17,0:17:40.63:0,41,492	0/0:22,0:22:41.67:0,42,596	0/0:21,0:21:57.17:0,57,752	0/0:18,0:18:15.05:0,15,202	0/1:18,0:18:6.14:6,0,184	0/0:41,0:41:99:0,114,1505	0/1:15,0:15:6.26:6,0,151	0/0:33,0:33:93.31:0,93,1256	0/0:25,0:25:60.18:0,60,795	0/0:28,0:28:72.20:0,72,924	0/0:25,0:25:66.14:0,66,823	0/0:21,0:21:54.17:0,54,714	0/0:27,0:27:69.23:0,69,930	1/1:2,20:21:57.20:999,57,0	0/0:21,0:21:54.14:0,54,695	0/0:15,0:15:39.13:0,39,527	0/0:21,0:21:54.17:0,54,715	0/0:32,0:32:87.27:0,87,1159	0/0:37,0:37:99:0,105,1401	0/0:17,0:17:45.11:0,45,561	0/0:16,0:16:36.10:0,36,468	0/0:16,0:16:42.14:0,42,566	0/0:25,0:24:75.22:0,75,982	0/0:32,0:32:96.32:0,96,1298	0/0:24,0:24:69.21:0,69,915	0/0:16,0:16:48.16:0,48,647
chr10	43117236	.	C	CTT	6795.22	PASS	AB=1.000;AC=38;AF=0.679;AN=56;BaseQRankSum=6.412;DP=653;FS=4.894;HRun=8;HaplotypeScore=96.5377;InbreedingCoeff=0.8321;MQ=71.99;MQ0=0;MQRankSum=0.145;QD=15.44;ReadPosRankSum=1.182;VQSLOD=2.5957;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,0:21:42.42:146,42,0	1/1:1,0:6:9.98:34,10,0	0/1:21,0:21:14.94:15,0,221	0/1:11,0:10:18.37:18,0,132	0/0:26,0:26:54.10:0,54,592	1/1:1,0:24:52.13:179,52,0	1/1:2,0:14:29.94:103,30,0	1/1:5,0:30:61.78:241,62,0	1/1:0,0:16:34.93:120,35,0	0/0:38,0:38:99:0,102,1123	0/0:25,0:25:65.96:0,66,715	1/1:3,26:29:57.19:905,57,0	1/1:3,12:15:26.93:428,27,0	1/1:3,17:20:51.17:810,51,0	0/0:26,0:26:66.14:0,66,725	1/1:5,0:38:64.88:223,65,0	0/0:27,0:27:78.21:0,78,869	0/0:23,0:23:57.11:0,57,612	1/1:3,0:11:19.96:69,20,0	1/1:5,0:31:62.74:227,63,0	1/1:2,0:20:39.93:137,40,0	1/1:5,20:25:54.18:857,54,0	1/1:3,23:27:60.16:913,60,0	1/1:1,24:25:63.21:1000,63,0	0/0:25,0:25:72.18:0,72,793	0/0:23,0:22:63.15:0,63,702	1/1:4,0:40:46.85:232,47,0	1/1:0,0:16:39.93:137,40,0
chr10	43118874	.	A	ATTC	16787.25	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=1.670;DP=527;FS=1.128;HRun=0;HaplotypeScore=100.9180;InbreedingCoeff=0.9965;MQ=84.22;MQ0=0;MQRankSum=-4.611;QD=52.13;ReadPosRankSum=1.313;VQSLOD=6.9871;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,11:12:21.07:463,21,0	1/1:1,11:13:33.11:728,33,0	0/0:19,0:19:45.15:0,45,687	0/0:21,0:21:45.01:0,45,645	0/0:25,0:25:72.23:0,72,1133	1/1:5,19:24:57.08:1229,57,0	1/1:4,16:20:48.10:982,48,0	1/1:5,23:28:72.23:1532,72,0	1/1:2,8:10:18.06:369,18,0	0/0:20,0:20:53.99:0,54,767	0/0:17,0:17:48.16:0,48,771	1/1:2,26:30:81.21:1700,81,0	1/1:5,19:24:60.07:1227,60,0	1/1:1,12:14:36.12:793,36,0	0/0:20,0:20:57.19:0,57,905	1/1:1,19:21:57.20:1257,57,0	0/0:22,0:22:57.17:0,57,890	0/0:15,0:14:33.11:0,33,530	1/1:1,11:11:33.11:728,33,0	1/1:2,20:22:60.12:1187,60,0	1/1:1,15:17:39.13:860,39,0	1/1:2,13:15:39.05:811,39,0	1/1:4,20:24:51:968,51,0	1/1:3,9:12:24.08:500,24,0	0/0:22,0:22:57.19:0,57,914	0/0:24,0:24:66.18:0,66,1032	1/1:1,16:17:48.16:1059,48,0	1/1:1,6:7:18.06:397,18,0
chr10	43119280	.	A	AATCAGAGGAGATCATTGTGCTCAGTT	2806.55	PASS	AB=0.753;AC=34;AF=0.944;AN=36;BaseQRankSum=-2.672;DP=38;FS=10.288;HRun=0;HaplotypeScore=32.5719;InbreedingCoeff=-0.2142;MQ=163.95;MQ0=0;MQRankSum=-2.247;QD=77.96;ReadPosRankSum=-1.882;VQSLOD=0.4428;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,0:1:3.01:72,3,0	1/1:1,0:1:3.01:50,3,0	0/1:5,1:8:5.58:684,0,6	0/1:5,0:7:31.07:824,0,31	./.	1/1:1,0:1:3.01:133,3,0	1/1:1,0:1:3.01:70,3,0	1/1:2,0:2:6:52,6,0	1/1:1,0:1:2.98:21,3,0	1/1:2,0:2:6.01:113,6,0	./.	./.	1/1:2,0:2:6.02:398,6,0	1/1:1,0:1:2.97:20,3,0	./.	1/1:2,0:2:5.98:71,6,0	./.	./.	1/1:1,0:1:3.01:53,3,0	1/1:2,0:2:6.02:113,6,0	./.	./.	./.	1/1:1,0:1:3:25,3,0	1/1:1,0:1:3.01:73,3,0	1/1:1,0:1:3.01:74,3,0	1/1:1,0:1:3.01:48,3,0	./.
chr10	43121630	.	G	GTTTTGTTTT	7434.91	PASS	AB=0.671;AC=26;AF=0.464;AN=56;BaseQRankSum=11.593;DP=591;FS=0.000;HRun=0;HaplotypeScore=194.4984;InbreedingCoeff=-0.7237;MQ=63.00;MQ0=2;MQRankSum=-7.178;QD=14.69;ReadPosRankSum=1.068;VQSLOD=3.6894;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:15,2:22:99:404,0,472	0/1:4,0:6:99:128,0,119	0/0:24,0:20:57.16:0,57,1063	0/0:34,0:27:58.76:0,59,1019	0/1:12,0:28:99:436,0,313	0/1:13,0:26:99:1090,0,384	0/1:13,0:22:99:368,0,495	0/1:32,0:37:99:361,0,991	0/1:7,0:21:99:997,0,241	0/1:10,0:21:99:242,0,338	1/1:0,0:8:20.90:157,21,0	0/1:8,0:19:99:110,0,292	0/1:5,0:16:99:103,0,149	0/1:5,0:10:80.99:81,0,172	0/1:13,0:24:99:118,0,439	0/1:13,0:27:99:1067,0,375	0/0:27,0:27:81.28:0,81,1951	0/1:15,0:29:99:197,0,404	0/1:14,0:17:99:103,0,445	0/1:4,0:19:38.85:377,0,39	0/1:11,0:19:81.91:82,0,398	0/1:4,0:12:99:152,0,145	0/1:7,0:15:58.97:59,0,258	0/1:21,0:36:99:183,0,588	0/1:3,0:17:94.50:233,0,95	0/1:4,0:11:59.85:180,0,60	0/1:13,0:31:99:163,0,451	0/1:6,0:11:42.61:43,0,154
chr10	43122436	.	GT	G	5238.63	PASS	AB=0.935;AC=48;AF=0.857;AN=56;BaseQRankSum=2.954;DP=372;FS=15.895;HRun=1;HaplotypeScore=153.2075;InbreedingCoeff=0.2068;MQ=66.32;MQ0=0;MQRankSum=-4.367;QD=14.88;ReadPosRankSum=5.578;VQSLOD=3.3525;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:13:14.96:118,15,0	1/1:3,0:3:8.97:70,9,0	0/1:7,2:9:24.33:130,0,24	0/1:11,1:12:5.10:99,0,5	0/0:9,0:9:2.99:0,3,25	1/1:14,0:14:35.85:280,36,0	1/1:14,0:14:26.69:200,27,0	1/1:21,0:21:58.99:399,59,0	1/1:13,1:14:8.94:224,9,0	1/1:14,0:14:10.90:238,11,0	1/1:7,0:7:14.97:120,15,0	1/1:14,0:14:35.91:286,36,0	1/1:22,0:22:50.73:396,51,0	1/1:17,0:17:38.94:327,39,0	1/1:12,0:12:29.26:230,29,0	1/1:21,0:21:19.86:301,20,0	1/1:18,0:18:29.28:233,29,0	0/1:16,0:15:2.90:187,0,3	1/1:15,0:15:36.58:259,37,0	0/0:11,0:11:0.47:0,0,1	1/1:23,1:24:7.61:62,8,0	0/1:10,0:10:2:102,0,2	1/1:5,0:5:5.96:48,6,0	1/1:12,0:12:8.93:74,9,0	1/1:12,0:12:19.05:164,19,0	1/1:18,0:18:50.46:371,50,0	1/1:13,0:13:35.87:277,36,0	1/1:2,0:2:5.97:45,6,0
chr10	43122491	.	ACT	A	13926.46	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=7.729;DP=535;FS=1.166;HRun=0;HaplotypeScore=132.4263;InbreedingCoeff=0.9723;MQ=89.74;MQ0=0;MQRankSum=-4.046;QD=39.12;ReadPosRankSum=-0.187;VQSLOD=6.3595;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,28:30:84.24:1195,84,0	1/1:0,6:6:18.06:265,18,0	0/0:21,0:21:63.22:0,63,1157	0/0:29,0:29:75.26:0,75,1400	0/0:11,0:11:33.11:0,33,588	1/1:1,20:21:57.19:817,57,0	1/1:0,16:16:41.80:614,42,0	1/1:0,28:28:84.27:1217,84,0	1/1:1,18:19:54.18:782,54,0	0/0:19,0:19:54.19:0,54,1010	0/0:6,0:6:15.05:0,15,278	1/1:3,24:27:72.24:1047,72,0	1/1:1,19:20:57.19:826,57,0	1/1:2,13:15:39.13:559,39,0	0/0:16,0:16:45.15:0,45,841	1/1:2,28:30:81.27:1192,81,0	0/0:17,0:17:48.16:0,48,890	0/0:18,0:18:51.14:0,51,920	1/1:3,15:18:45.12:636,45,0	1/1:1,15:16:45.15:654,45,0	1/1:3,42:45:99:1708,117,0	1/1:3,12:15:36.12:530,36,0	1/1:0,5:5:9.03:132,9,0	1/1:1,18:19:45.15:655,45,0	0/0:22,0:22:57.20:0,57,1064	0/0:20,0:20:57.19:0,57,1012	1/1:1,23:24:69.23:1008,69,0	1/1:0,2:2:6.02:88,6,0
chr10	43122766	.	T	TTG	8452.88	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-14.803;DP=797;FS=0.000;HRun=0;HaplotypeScore=90.1211;InbreedingCoeff=0.9995;MQ=66.58;MQ0=0;MQRankSum=0.736;QD=36.43;ReadPosRankSum=0.368;VQSLOD=6.8218;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,43:48:99:1770,105,0	1/1:2,11:13:27.09:455,27,0	0/0:23,0:22:50.34:0,50,654	0/0:23,0:22:42.94:0,43,551	0/0:24,0:24:63.20:0,63,810	0/0:22,0:22:51.16:0,51,644	0/0:21,0:21:60.18:0,60,757	1/1:10,31:42:99:1478,99,0	0/0:27,0:27:60.17:0,60,744	0/0:44,0:44:99:0,114,1455	0/0:23,0:23:60.14:0,60,729	0/0:26,0:26:69.17:0,69,823	0/0:26,0:26:69.21:0,69,874	0/0:33,0:33:84.27:0,84,1081	0/0:33,0:33:96.29:0,96,1208	0/0:27,0:27:81.24:0,81,1016	0/0:36,0:36:96.28:0,96,1206	0/0:23,0:23:54.14:0,54,675	1/1:2,20:22:60.17:923,60,0	1/1:3,28:31:75.20:1197,75,0	1/1:3,31:34:72.25:1214,72,0	0/0:34,0:34:87.20:0,87,1081	0/0:25,0:25:69.19:0,69,848	0/0:25,0:25:75.18:0,75,919	0/0:35,0:35:90.28:0,90,1146	0/0:35,0:35:93.26:0,93,1135	1/1:4,29:33:60.20:1012,60,0	1/1:0,8:8:24.08:404,24,0
chr10	43123975	.	GA	G	2581.19	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=2.740;DP=438;FS=1.768;HRun=1;HaplotypeScore=66.1976;InbreedingCoeff=0.9952;MQ=101.01;MQ0=0;MQRankSum=-2.810;QD=35.85;ReadPosRankSum=0.221;VQSLOD=3.6592;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:54.18:0,54,862	0/0:5,0:5:15.05:0,15,240	0/0:35,0:35:99:0,102,1626	0/0:25,0:25:71.91:0,72,1078	0/0:16,0:16:35.11:0,35,573	0/0:17,0:17:48.16:0,48,766	0/0:16,0:16:45.15:0,45,718	0/0:17,0:16:51.17:0,51,815	0/0:18,0:18:45.12:0,45,668	1/1:0,11:11:30.09:402,30,0	1/1:0,14:14:36.08:481,36,0	0/0:15,0:15:39.05:0,39,620	0/0:20,0:20:51.17:0,51,814	0/0:11,0:11:33.11:0,33,526	1/1:0,11:11:30.10:419,30,0	0/0:19,0:19:48.04:0,48,765	0/0:13,0:13:36.12:0,36,570	1/1:0,9:9:27.09:377,27,0	0/0:21,0:21:63.21:0,63,1000	0/0:16,0:16:48.15:0,48,743	0/0:11,0:11:24.08:0,24,383	0/0:19,0:19:54.18:0,54,862	0/0:14,0:14:36.12:0,36,574	0/0:14,0:14:30.10:0,30,479	1/1:0,17:17:48.16:671,48,0	1/1:0,10:10:30.10:419,30,0	0/0:15,0:15:45.11:0,45,690	0/0:8,0:8:24.08:0,24,383
chr10	43126265	.	GGACA	G	7315.15	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=12.179;DP=758;FS=1.949;HRun=0;HaplotypeScore=135.7328;InbreedingCoeff=0.9970;MQ=75.54;MQ0=0;MQRankSum=-0.624;QD=31.00;ReadPosRankSum=1.960;VQSLOD=4.9167;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,53:68:99:2013,123,0	1/1:4,11:15:29.89:471,30,0	0/0:27,0:27:42.14:0,42,972	0/0:27,0:27:35.30:0,35,773	0/0:25,0:25:57.18:0,57,1325	0/0:20,0:20:51.16:0,51,1200	0/0:35,0:35:75.22:0,75,1677	1/1:13,20:33:59.93:781,60,0	0/0:32,0:32:75.24:0,75,1813	0/0:28,0:28:63.22:0,63,1556	0/0:12,0:12:27.09:0,27,674	0/0:22,0:22:57.20:0,57,1422	0/0:25,0:25:69.17:0,69,1659	0/0:27,0:27:63.20:0,63,1486	0/0:27,0:27:63.21:0,63,1520	0/0:32,0:32:96.29:0,96,2243	0/0:33,0:33:78.25:0,78,1894	0/0:21,0:21:54.16:0,54,1243	1/1:9,20:29:60.03:839,60,0	1/1:5,14:19:36.12:610,36,0	1/1:8,40:48:86.19:1470,86,0	0/0:20,0:20:51.16:0,51,1215	0/0:31,0:31:66.23:0,66,1613	0/0:18,0:18:39.12:0,39,919	0/0:20,0:20:57.18:0,57,1374	0/0:40,0:40:99:0,99,2366	1/1:1,18:19:54.18:877,54,0	1/1:0,5:5:15.05:254,15,0
chr10	43126423	.	ACAC	A	8896.51	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=8.470;DP=652;FS=6.725;HRun=0;HaplotypeScore=107.4347;InbreedingCoeff=0.9971;MQ=86.20;MQ0=0;MQRankSum=-2.439;QD=43.40;ReadPosRankSum=4.363;VQSLOD=6.4706;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,100,2092	0/0:11,0:11:33.11:0,33,737	0/0:31,0:31:68.24:0,68,1611	0/0:20,0:20:47.25:0,47,1050	0/0:15,0:15:45.10:0,45,727	1/1:0,19:19:48.16:818,48,0	1/1:0,30:30:75.19:1243,75,0	0/0:32,0:32:90.27:0,90,1847	1/1:1,31:32:90.24:1495,90,0	0/0:20,0:20:60.19:0,60,1185	0/0:9,0:9:24.07:0,24,452	1/1:3,21:24:54.18:919,54,0	1/1:1,19:20:51.11:836,51,0	1/1:0,23:23:66.16:1092,66,0	0/0:27,0:27:81.27:0,81,1800	0/0:28,0:28:78.25:0,78,1753	0/0:31,0:31:90.31:0,90,2031	0/0:28,0:28:84.29:0,84,1879	0/0:24,0:24:69.23:0,69,1538	0/0:24,0:24:69.21:0,69,1490	0/0:36,0:36:99:0,99,2235	1/1:1,14:15:39.13:654,39,0	1/1:0,13:13:36.12:614,36,0	1/1:1,28:29:72.25:1225,72,0	0/0:24,0:24:69.17:0,69,1381	0/0:25,0:25:72.23:0,72,1510	0/0:22,0:22:66.23:0,66,1520	0/0:5,0:5:15.05:0,15,318
chr10	43126616	.	AC	A	1651.65	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.850;DP=724;FS=0.000;HRun=2;HaplotypeScore=76.0698;InbreedingCoeff=0.9987;MQ=88.91;MQ0=0;MQRankSum=-4.297;QD=35.91;ReadPosRankSum=1.156;VQSLOD=4.0917;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,35:35:99:1383,99,0	1/1:0,10:11:29.93:390,30,0	0/0:26,0:26:70.77:0,71,1022	0/0:27,0:27:65.04:0,65,978	0/0:30,0:30:84.23:0,84,1284	0/0:18,0:18:54.18:0,54,852	0/0:30,0:30:90.23:0,90,1355	0/0:25,0:25:69.24:0,69,1100	0/0:25,0:25:75.14:0,75,1113	0/0:23,0:23:69.21:0,69,1028	0/0:11,0:11:27.06:0,27,383	0/0:29,0:29:87.25:0,87,1313	0/0:34,0:34:99:0,99,1522	0/0:32,0:32:93.25:0,93,1400	0/0:30,0:30:90.24:0,90,1374	0/0:26,0:26:78.25:0,78,1222	0/0:39,0:39:99:0,117,1863	0/0:24,0:24:72.24:0,72,1125	0/0:23,0:23:69.14:0,69,1015	0/0:20,0:20:57.15:0,57,881	0/0:47,0:47:99:0,138,2139	0/0:26,0:26:75.23:0,75,1150	0/0:18,0:18:54.18:0,54,852	0/0:26,0:26:75.21:0,75,1167	0/0:27,0:27:78.20:0,78,1157	0/0:23,0:23:69.20:0,69,1033	0/0:30,0:30:90.24:0,90,1403	0/0:9,0:9:27.04:0,27,379
chr10	43126916	.	TA	T	10007.94	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=7.885;DP=572;FS=6.338;HRun=9;HaplotypeScore=69.2126;InbreedingCoeff=0.9952;MQ=81.68;MQ0=1;MQRankSum=-4.185;QD=22.24;ReadPosRankSum=1.597;VQSLOD=5.8645;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,32:32:89.97:813,90,0	1/1:1,9:10:27.01:247,27,0	0/0:24,0:20:26.07:0,26,248	0/0:29,0:26:24.43:0,24,405	0/0:29,0:29:81.24:0,81,935	1/1:4,34:38:96.05:878,96,0	1/1:0,14:14:30.02:275,30,0	1/1:5,19:24:57:515,57,0	1/1:4,9:13:24:220,24,0	1/1:10,21:31:81:724,81,0	1/1:3,5:8:17.99:160,18,0	1/1:2,13:15:32.82:302,33,0	1/1:1,12:13:27.01:247,27,0	1/1:2,9:11:27.01:247,27,0	1/1:0,21:22:65.53:585,66,0	0/0:16,0:16:42.12:0,42,485	0/0:24,0:24:63.13:0,63,701	1/1:4,12:16:36.01:329,36,0	1/1:1,18:19:53.88:467,54,0	1/1:2,14:16:38.75:309,39,0	1/1:3,11:14:30.01:274,30,0	1/1:3,28:31:75.03:686,75,0	1/1:1,22:23:60.03:549,60,0	1/1:0,12:12:33.02:302,33,0	1/1:4,17:21:23.31:451,23,0	1/1:3,17:20:51.02:466,51,0	1/1:8,20:28:56.99:521,57,0	1/1:0,19:19:48.03:439,48,0
chr10	43126957	.	G	GC	3481.95	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-1.584;DP=546;FS=3.222;HRun=6;HaplotypeScore=82.7175;InbreedingCoeff=0.9977;MQ=68.95;MQ0=1;MQRankSum=-3.857;QD=31.09;ReadPosRankSum=0.219;VQSLOD=4.0435;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:87.15:0,87,871	0/0:7,0:7:17.96:0,18,170	0/0:20,0:18:41.92:0,42,380	0/0:18,0:16:36.07:0,36,364	0/0:27,0:27:69.15:0,69,704	0/0:31,0:31:78.17:0,78,790	0/0:14,0:14:30.07:0,30,306	0/0:28,0:28:72.12:0,72,714	0/0:13,0:13:33.07:0,33,337	1/1:2,23:25:66.21:830,66,0	1/1:0,10:10:30.01:348,30,0	0/0:15,0:15:30.07:0,30,306	0/0:16,0:16:39.08:0,39,391	0/0:20,0:20:57.11:0,57,573	1/1:2,16:18:46.39:569,46,0	0/0:17,0:17:51.10:0,51,514	0/0:19,0:20:50.12:0,50,488	1/1:3,16:19:33.11:415,33,0	0/0:15,0:15:36.06:0,36,362	0/0:17,0:17:42.09:0,42,428	0/0:12,0:12:30.07:0,30,306	0/0:25,0:25:65.90:0,66,636	0/0:25,0:25:66.10:0,66,656	0/0:16,0:16:33.07:0,33,337	1/1:3,17:20:51.16:641,51,0	1/1:1,19:20:54.17:679,54,0	0/0:26,0:26:75.13:0,75,750	0/0:19,0:19:42.09:0,42,428
chr10	43127187	.	C	CA	444.05	PASS	AB=0.844;AC=6;AF=0.107;AN=56;BaseQRankSum=2.674;DP=716;FS=0.892;HRun=0;HaplotypeScore=161.2469;InbreedingCoeff=-0.1208;MQ=74.59;MQ0=1;MQRankSum=-6.936;QD=3.44;ReadPosRankSum=-2.783;VQSLOD=3.0979;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:29:9.55:10,0,482	0/1:8,2:10:68.22:68,0,266	0/0:34,0:34:96.27:0,96,1261	0/0:24,0:22:66.22:0,66,911	0/0:19,0:19:51.14:0,51,678	0/0:26,0:26:78.25:0,78,1065	0/0:39,0:39:99:0,114,1560	0/1:26,8:34:99:280,0,973	0/0:22,0:22:66.20:0,66,905	0/0:22,0:22:63.20:0,63,867	0/0:12,0:12:30.09:0,30,403	0/0:34,0:34:96.32:0,96,1342	0/0:35,0:35:99:0,99,1384	0/0:39,0:39:99:0,117,1636	0/0:30,0:29:81.27:0,81,1133	0/0:18,0:18:54.18:0,54,755	0/0:33,0:33:96.32:0,96,1340	0/0:20,0:20:57.17:0,57,779	0/1:17,5:22:99:131,0,590	0/1:6,3:9:36.19:36,0,114	0/0:34,12:46:69.61:0,70,948	0/0:18,0:18:45.15:0,45,629	0/0:13,0:13:39.13:0,39,538	0/0:44,0:44:99:0,132,1828	0/0:29,0:29:64.46:0,64,880	0/0:21,0:21:60.19:0,60,825	0/1:20,4:24:41.45:41,0,597	0/0:9,0:9:8.05:0,8,89
chr10	43127192	.	T	TGCCACCACGCTGTCATGCTA	8597.57	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-9.199;DP=740;FS=14.655;HRun=0;HaplotypeScore=418.9732;InbreedingCoeff=0.9787;MQ=75.00;MQ0=1;MQRankSum=-9.508;QD=39.44;ReadPosRankSum=-5.029;VQSLOD=1.8238;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:22,11:48:31.24:1537,31,0	1/1:11,0:11:17.98:652,18,0	0/0:29,0:29:47.81:0,48,1555	0/0:22,0:21:30.03:0,30,915	0/0:22,0:22:57.14:0,57,1698	0/0:26,0:26:51.08:0,51,2100	0/0:38,0:38:87.20:0,87,3999	1/1:34,0:34:60.12:1975,60,0	0/0:22,0:22:51.18:0,51,2358	0/0:21,0:21:45.14:0,45,1837	0/0:13,0:13:24.07:0,24,892	0/0:31,0:31:72.23:0,72,3318	0/0:36,0:36:81.17:0,81,3757	0/0:39,0:39:78.25:0,78,3751	0/0:30,0:29:63.03:0,63,3027	0/0:15,0:15:45.15:0,45,2201	0/0:33,0:33:81.26:0,81,3773	0/0:18,0:18:42.14:0,42,2069	1/1:22,0:22:39.04:1525,39,0	1/1:11,0:11:17.63:514,18,0	1/1:50,0:50:29.60:586,30,0	0/0:20,0:20:48.16:0,48,1914	0/0:13,0:13:30.09:0,30,1412	0/0:45,0:45:99:0,114,5098	0/0:29,0:29:42.03:0,42,1739	0/0:20,0:20:38.96:0,39,1670	1/1:22,0:22:35.93:1247,36,0	1/1:2,7:19:6.02:561,6,0
chr10	43128148	.	CT	C	6204.94	PASS	AB=0.984;AC=29;AF=0.518;AN=56;BaseQRankSum=9.600;DP=613;FS=0.000;HRun=10;HaplotypeScore=72.3072;InbreedingCoeff=0.9077;MQ=76.46;MQ0=10;MQRankSum=1.087;QD=17.19;ReadPosRankSum=2.772;VQSLOD=5.4830;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,28:30:74.98:651,75,0	1/1:0,2:2:6:52,6,0	0/0:62,3:32:30.12:0,30,314	0/1:60,1:27:17.27:17,0,66	0/0:28,0:28:78.10:0,78,829	0/0:19,0:18:51.12:0,51,549	0/0:13,0:13:33.07:0,33,355	1/1:3,28:31:86.52:701,87,0	0/0:12,0:12:33.06:0,33,347	1/1:5,21:26:62.87:534,63,0	1/1:2,22:24:59.80:502,60,0	0/0:16,0:16:45.08:0,45,478	0/0:13,0:13:36.08:0,36,389	0/0:16,0:16:45.12:0,45,498	1/1:1,15:16:41.99:365,42,0	0/0:19,0:19:51.05:0,51,525	0/0:19,0:19:51.11:0,51,546	1/1:2,25:27:38.94:566,39,0	1/1:2,22:24:59.94:515,60,0	1/1:3,22:25:41.72:477,42,0	1/1:1,4:5:12:104,12,0	0/0:11,0:11:33.09:0,33,365	0/0:9,0:9:18.02:0,18,181	0/0:12,0:12:33.08:0,33,357	1/1:4,18:22:50.98:443,51,0	1/1:3,28:31:83.96:726,84,0	1/1:3,21:24:50.20:423,50,0	1/1:6,5:11:14.99:130,15,0
chr10	43128501	.	AG	A	7405.92	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=12.994;DP=654;FS=1.022;HRun=1;HaplotypeScore=64.4827;InbreedingCoeff=0.9758;MQ=80.03;MQ0=0;MQRankSum=-1.273;QD=37.03;ReadPosRankSum=-0.252;VQSLOD=4.9542;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,45:45:99:1509,108,0	1/1:0,5:5:12.04:168,12,0	0/0:13,0:13:30.05:0,30,406	0/0:21,0:21:9.52:0,10,585	0/0:21,0:21:63.21:0,63,1005	0/0:19,0:19:57.18:0,57,885	0/0:32,0:32:96.25:0,96,1470	1/1:1,51:52:99:1933,141,0	0/0:37,0:37:99:0,111,1716	0/0:19,0:19:57.18:0,57,866	0/0:12,0:12:33.10:0,33,504	0/0:28,0:28:81.26:0,81,1267	0/0:23,0:23:69.24:0,69,1102	0/0:27,0:27:78.25:0,78,1220	0/0:29,0:29:87.22:0,87,1332	0/0:17,0:17:51.16:0,51,791	0/0:33,0:33:96.33:0,96,1532	0/0:24,0:24:72.25:0,72,1147	1/1:0,18:18:51.14:679,51,0	1/1:0,19:19:57.12:773,57,0	1/1:1,41:42:99:1592,114,0	0/0:13,0:13:39.13:0,39,621	0/0:8,0:8:24.08:0,24,383	0/0:38,0:38:99:0,111,1714	0/0:17,0:17:51.17:0,51,815	0/0:23,0:23:69.20:0,69,1074	1/1:0,16:16:45.15:625,45,0	1/1:0,3:3:9.03:126,9,0
chr10	43128671	.	AAT	A	1221.36	PASS	AB=0.988;AC=21;AF=0.375;AN=56;BaseQRankSum=9.253;DP=583;FS=25.839;HRun=0;HaplotypeScore=133.1432;InbreedingCoeff=-0.0434;MQ=64.47;MQ0=33;MQRankSum=-4.847;QD=3.74;ReadPosRankSum=4.384;VQSLOD=1.1660;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:16:17.22:0,17,191	0/0:11,0:11:29.20:0,29,208	0/0:56,0:22:31.33:0,31,420	0/0:33,0:16:19.07:0,19,213	0/0:32,0:32:59.26:0,59,416	1/1:17,0:16:21.52:99,22,0	0/1:8,0:4:9.25:9,0,17	0/1:33,0:29:50.24:50,0,216	0/1:26,0:21:67.55:132,0,68	0/1:22,0:20:50.02:64,0,50	0/1:13,0:11:23.69:70,0,24	0/1:13,1:13:86.30:86,0,87	0/1:14,0:9:6.41:50,0,6	0/1:16,1:14:36.36:76,0,36	1/1:19,1:16:6.23:97,6,0	0/0:3,0:3:8.76:0,9,105	0/0:38,0:38:83.12:0,83,1426	0/1:28,1:27:82.46:82,0,165	0/0:24,0:22:42.73:0,43,493	0/0:17,0:14:12.58:0,13,202	0/1:4,0:4:11.25:11,0,20	0/1:27,0:24:70.16:108,0,70	1/1:15,0:12:1.49:83,1,0	0/1:18,0:15:18.57:89,0,19	1/1:20,0:19:42.77:168,43,0	0/1:30,0:25:48.97:120,0,49	0/0:19,0:18:13.65:0,14,201	0/0:6,0:4:5.60:0,6,36
chr10	43128673	.	TAA	T	5107.49	PASS	AB=1.000;AC=32;AF=0.571;AN=56;BaseQRankSum=4.627;DP=576;FS=20.236;HRun=11;HaplotypeScore=122.4929;InbreedingCoeff=0.8261;MQ=64.31;MQ0=33;MQRankSum=-3.733;QD=16.01;ReadPosRankSum=3.611;VQSLOD=1.9606;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:17,0:16:2.62:3,0,5	0/0:10,0:11:14.25:0,14,94	0/0:55,0:21:23.67:0,24,267	0/0:33,0:17:22.78:0,23,241	0/0:7,0:32:45.98:0,46,206	1/1:11,6:16:21.02:197,21,0	1/1:5,4:5:8.99:75,9,0	0/0:30,0:28:18.70:0,19,108	1/1:6,19:20:45.07:446,45,0	1/1:5,16:19:30.86:445,31,0	1/1:3,11:12:23.12:251,23,0	1/1:6,7:12:24.01:234,24,0	1/1:3,9:7:17.92:162,18,0	1/1:5,12:14:30.04:290,30,0	1/1:5,14:15:36.04:347,36,0	0/0:2,0:3:8.52:0,9,97	0/0:38,0:38:99:0,107,1517	1/1:13,17:28:42.05:446,42,0	0/0:13,0:23:45.23:0,45,319	0/0:17,0:14:4.80:0,5,83	0/0:4,0:4:1.24:0,1,36	1/1:7,20:24:51.06:500,51,0	1/1:1,11:9:27.06:277,27,0	1/1:2,15:14:30.02:302,30,0	1/1:5,15:19:56.80:519,57,0	1/1:9,21:25:65.39:612,65,0	0/1:19,0:18:2.11:2,0,31	0/0:5,0:4:6.01:0,6,66
chr10	43128682	.	A	AGG	2932.03	PASS	AB=0.896;AC=22;AF=0.393;AN=56;BaseQRankSum=0.521;DP=544;FS=50.814;HRun=0;HaplotypeScore=129.7418;InbreedingCoeff=0.4404;MQ=56.87;MQ0=37;MQRankSum=-0.477;QD=11.15;ReadPosRankSum=6.665;VQSLOD=1.1222;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:13:10.27:0,10,78	0/0:9,0:9:24.01:0,24,175	0/0:51,0:15:26.21:0,26,303	0/0:33,0:14:25.88:0,26,326	0/0:28,0:28:62.83:0,63,429	0/1:9,9:18:36.61:43,0,37	0/0:7,2:4:4.75:0,5,21	0/0:29,0:24:13.98:0,14,99	1/1:19,2:16:31.86:338,32,0	0/1:26,2:26:99:208,0,196	0/1:14,0:12:76.91:124,0,77	1/1:8,1:8:17.22:171,17,0	1/1:9,2:6:1.06:105,1,0	1/1:13,1:11:17.34:206,17,0	1/1:17,2:15:21.58:246,22,0	0/0:4,0:4:9.01:0,9,114	0/0:39,0:39:99:0,116,1737	0/1:20,2:20:32.76:224,0,33	0/0:22,0:20:46.02:0,46,314	0/0:15,0:12:11.31:0,11,115	0/0:4,0:4:4.55:0,5,51	1/1:20,1:19:32.29:368,32,0	1/1:12,1:10:22.60:207,23,0	1/1:16,0:13:23.24:229,23,0	0/1:25,1:25:25.56:243,0,26	0/1:26,3:24:20.62:418,0,21	0/0:17,0:16:16.13:0,16,145	0/0:7,0:4:5.65:0,6,31
chr10	43128684	.	AGG	A	3220.05	PASS	AB=0.945;AC=27;AF=0.482;AN=56;BaseQRankSum=7.305;DP=527;FS=10.349;HRun=2;HaplotypeScore=123.5484;InbreedingCoeff=0.0341;MQ=54.11;MQ0=37;MQRankSum=-9.711;QD=10.19;ReadPosRankSum=1.101;VQSLOD=-0.2432;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,12:13:7.92:308,8,0	1/1:3,7:9:11.41:257,11,0	0/0:46,0:12:11.03:0,11,126	0/0:30,0:13:6.54:0,7,257	0/0:27,0:27:44.38:0,44,536	1/1:18,1:18:28.90:231,29,0	1/1:8,1:4:12.02:125,12,0	0/1:11,13:19:14.25:340,0,14	0/1:22,0:17:38.96:105,0,39	0/0:29,0:27:47.50:0,48,638	0/0:14,0:12:22.98:0,23,186	0/1:9,0:8:15.84:41,0,16	0/1:11,0:6:16.42:45,0,16	0/1:14,0:11:47.90:54,0,48	0/1:19,0:15:47.34:90,0,47	0/0:4,0:4:12.03:0,12,144	0/0:39,0:39:99:0,111,1658	0/0:22,0:20:41.57:0,42,258	0/1:16,2:17:5.52:390,0,6	1/1:1,12:11:21.07:287,21,0	0/1:3,1:4:24.04:34,0,24	0/1:22,0:19:86.37:89,0,86	0/1:13,0:10:22.15:22,0,41	0/1:16,0:13:9.57:61,0,10	0/1:25,0:24:22.65:219,0,23	0/1:29,1:25:99:215,0,122	1/1:1,15:15:33.11:471,33,0	1/1:2,4:3:2.96:19,3,0
chr10	43128692	.	AGGAAGGAAGGAAGGAAGGAG	A	3608.96	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=5.076;DP=486;FS=4.694;HRun=0;HaplotypeScore=256.3829;InbreedingCoeff=0.3425;MQ=48.62;MQ0=37;MQRankSum=-6.147;QD=21.74;ReadPosRankSum=2.384;VQSLOD=1.9528;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:7,5:11:25.20:765,25,0	1/1:6,3:8:12.04:615,12,0	0/0:30,0:4:3.01:0,3,99	0/0:24,0:10:13.72:0,14,339	0/0:25,0:25:56.02:0,56,3009	0/0:19,0:18:21.33:0,21,685	0/0:11,0:6:18.06:0,18,358	1/1:20,0:16:4.39:24,4,0	0/0:25,0:20:26.13:0,26,1036	0/0:32,0:30:38.10:0,38,4581	0/0:13,0:10:27.09:0,27,1519	0/1:8,0:7:84.56:121,0,85	0/1:10,0:6:79.67:80,0,82	0/1:13,0:11:27.81:168,0,28	0/0:19,0:14:4.42:0,4,915	0/0:6,0:6:15.05:0,15,780	0/0:41,0:41:99:0,99,7758	0/0:20,0:18:30.10:0,30,1922	1/1:12,2:13:6.49:313,6,0	1/1:10,1:8:11.93:337,12,0	0/1:4,0:4:10.51:14,0,11	0/1:18,0:16:44.04:242,0,44	0/1:13,0:11:58.79:98,0,59	0/1:15,0:12:76.38:133,0,76	0/0:22,0:21:42.14:0,42,1760	0/0:32,0:28:20.24:0,20,2646	1/1:11,4:14:23.89:700,24,0	1/1:4,0:1:0.47:1,0,0
chr10	43128700	.	AGGAAGGAAGGAG	A	7274.49	PASS	AB=1.000;AC=38;AF=0.679;AN=56;BaseQRankSum=1.244;DP=467;FS=30.088;HRun=0;HaplotypeScore=183.4674;InbreedingCoeff=0.3014;MQ=47.03;MQ0=29;MQRankSum=-4.215;QD=21.15;ReadPosRankSum=-3.690;VQSLOD=2.0207;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:10,0:10:25.99:497,26,0	1/1:8,0:8:15.04:417,15,0	0/0:23,0:5:3.01:0,3,37	0/0:24,0:7:13.21:0,13,150	0/1:23,0:23:73.08:73,0,1424	1/1:21,0:19:25.35:566,25,0	1/1:13,0:10:8.40:261,8,0	1/1:15,0:12:4.39:24,4,0	0/1:26,0:23:9.70:482,0,10	0/1:31,0:29:28.81:29,0,2196	0/1:13,0:10:3.91:4,0,711	1/1:6,4:9:26.87:521,27,0	1/1:8,3:8:23.85:404,24,0	1/1:11,5:15:35.88:676,36,0	0/1:19,0:15:95.86:96,0,126	0/1:6,0:6:12.11:12,0,306	0/0:38,0:38:99:0,105,4818	0/0:19,0:17:24.73:0,25,922	1/1:10,0:9:6.49:201,6,0	1/1:7,0:6:11.93:225,12,0	0/1:3,0:3:10.47:14,0,10	1/1:13,5:16:39.01:878,39,0	1/1:15,3:16:44.52:678,45,0	1/1:13,4:15:38.76:663,39,0	0/0:19,0:19:15.96:0,16,355	0/1:31,0:28:77.88:78,0,659	1/1:15,0:14:23.89:477,24,0	1/1:2,0:1:0.47:1,0,0
chr10	43128704	.	AGGAAGGAG	A	8474.58	PASS	AB=1.000;AC=43;AF=0.768;AN=56;BaseQRankSum=2.715;DP=463;FS=9.205;HRun=0;HaplotypeScore=151.1815;InbreedingCoeff=0.2905;MQ=47.88;MQ0=25;MQRankSum=-6.700;QD=22.01;ReadPosRankSum=-4.753;VQSLOD=2.2580;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:10,0:10:25.73:361,26,0	1/1:8,0:7:15.04:305,15,0	0/1:19,0:6:0.84:1,0,19	0/0:22,0:6:13.21:0,13,103	0/1:25,0:25:99:118,0,772	1/1:12,8:18:47.97:996,48,0	1/1:10,3:10:29.91:488,30,0	1/1:13,0:11:4.39:24,4,0	1/1:18,7:24:65.89:995,66,0	0/1:32,0:30:99:105,0,1084	0/1:15,0:12:47.89:48,0,366	1/1:13,0:12:35.87:468,36,0	1/1:11,0:9:26.85:342,27,0	1/1:17,0:16:38.89:547,39,0	1/1:20,0:16:41.99:376,42,0	0/1:7,0:7:84.05:84,0,130	0/0:39,0:39:99:0,111,3399	0/0:17,0:16:4:0,4,442	1/1:10,0:9:6.49:145,6,0	1/1:6,0:5:11.93:169,12,0	0/1:3,0:3:10.47:14,0,10	1/1:17,2:17:41.99:685,42,0	1/1:18,0:16:44.50:518,45,0	1/1:17,0:15:41.76:536,42,0	1/1:18,0:18:39.57:311,40,0	0/1:31,0:28:44.08:471,0,44	1/1:13,0:12:23.89:365,24,0	1/1:2,0:1:0.47:1,0,0
chr10	43128708	.	AGGAG	A	8877.86	PASS	AB=1.000;AC=44;AF=0.786;AN=56;BaseQRankSum=1.640;DP=505;FS=0.000;HRun=0;HaplotypeScore=127.0606;InbreedingCoeff=0.2912;MQ=44.56;MQ0=25;MQRankSum=-5.059;QD=20.99;ReadPosRankSum=-5.359;VQSLOD=3.3852;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:15:37.08:340,37,0	1/1:13,0:12:29.86:292,30,0	0/0:22,0:6:2.17:0,2,49	0/0:22,0:5:14.71:0,15,112	0/1:24,0:24:99:169,0,155	1/1:19,0:17:47.96:614,48,0	1/1:12,1:10:29.91:332,30,0	1/1:22,0:19:25.32:197,25,0	1/1:26,0:25:71.86:733,72,0	0/1:34,0:32:99:311,0,118	0/1:16,0:14:21.71:107,0,22	1/1:13,0:12:35.87:356,36,0	1/1:10,0:9:26.85:249,27,0	1/1:17,0:17:41.89:426,42,0	1/1:14,6:16:45.04:543,45,0	0/1:7,0:7:14.12:112,0,14	0/0:38,0:38:87.04:0,87,2146	0/1:17,0:16:29.09:71,0,29	1/1:15,0:14:27.38:247,27,0	1/1:10,0:9:23.81:198,24,0	0/1:4,0:4:7.50:31,0,7	1/1:17,0:15:41.99:470,42,0	1/1:18,0:17:47.50:422,48,0	1/1:17,0:15:41.76:401,42,0	1/1:1,17:18:42.13:683,42,0	1/1:23,7:28:65.95:1032,66,0	1/1:22,0:21:56.56:479,57,0	1/1:6,0:5:2.46:63,2,0
chr10	43130132	.	A	ATATTCTCTCCAGACCCCAGTATGTA	27705.26	PASS	AB=0.588;AC=53;AF=0.981;AN=54;BaseQRankSum=-0.577;DP=202;FS=19.306;HRun=0;HaplotypeScore=222.5119;InbreedingCoeff=-0.0470;MQ=75.24;MQ0=3;MQRankSum=-2.225;QD=137.15;ReadPosRankSum=1.041;VQSLOD=3.0905;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,0:3:6.02:218,6,0	1/1:3,0:3:9.03:615,9,0	1/1:2,1:5:12.04:716,12,0	0/1:3,0:10:7.62:984,0,8	1/1:10,0:10:18.06:752,18,0	1/1:11,0:10:27.09:1919,27,0	1/1:6,0:6:18.06:1201,18,0	1/1:9,0:9:27.08:1991,27,0	1/1:9,0:9:27.09:1556,27,0	1/1:10,0:10:27.09:1847,27,0	1/1:9,0:9:21.07:1163,21,0	1/1:4,0:5:14.08:766,14,0	1/1:7,0:6:13.29:821,13,0	1/1:3,0:3:6.02:289,6,0	1/1:13,0:13:30.99:1847,31,0	1/1:9,0:9:27.09:1751,27,0	1/1:4,0:4:12.04:654,12,0	1/1:3,0:3:6.02:306,6,0	1/1:8,0:8:24.08:1637,24,0	1/1:8,0:8:21.05:1017,21,0	./.	1/1:10,0:10:21.07:903,21,0	1/1:10,0:10:24.08:679,24,0	1/1:9,0:9:3.01:292,3,0	1/1:7,0:7:16.87:792,17,0	1/1:7,0:6:15.05:1010,15,0	1/1:11,0:11:27.09:1546,27,0	1/1:3,0:3:6.02:431,6,0
chr10	43132632	.	AAATAATAATAATAAT	A	468.93	PASS	AC=16;AF=0.381;AN=42;BaseQRankSum=4.868;DP=189;FS=1.215;HRun=0;HaplotypeScore=84.4821;InbreedingCoeff=0.5203;MQ=64.12;MQ0=2;MQRankSum=-2.181;QD=10.19;ReadPosRankSum=1.050;VQSLOD=1.3888;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:27.09:0,27,1685	./.	./.	./.	0/0:5,0:5:0.47:0,0,1	1/1:7,7:14:6.02:248,6,0	1/1:6,0:6:5.74:31,6,0	0/0:25,0:24:29.92:0,30,246	1/1:6,0:6:2.92:17,3,0	0/0:9,0:9:5.96:0,6,45	0/0:4,0:4:2.92:0,3,17	1/1:2,0:3:6:81,6,0	1/1:3,0:6:3.01:56,3,0	1/1:4,0:5:8.94:85,9,0	./.	./.	0/0:11,0:11:14.93:0,15,184	./.	0/0:9,0:9:3.01:0,3,48	0/0:7,0:7:5.96:0,6,45	0/0:3,0:3:2.96:0,3,19	1/1:2,0:3:2.90:16,3,0	0/0:4,0:4:2.97:0,3,20	1/1:2,0:3:5.93:73,6,0	0/0:5,0:5:5.49:0,5,34	0/0:4,0:9:0.34:0,0,15	0/0:10,0:10:5.99:0,6,48	./.
chr10	43132963	.	C	CT	3204.50	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-12.278;DP=478;FS=0.859;HRun=10;HaplotypeScore=55.1193;InbreedingCoeff=0.9573;MQ=70.99;MQ0=1;MQRankSum=0.773;QD=21.80;ReadPosRankSum=0.985;VQSLOD=4.5368;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:89.88:0,90,740	0/0:3,0:3:8.99:0,9,74	0/0:7,0:7:8.21:0,8,56	0/0:11,0:10:11.90:0,12,88	0/0:14,0:15:37.98:0,38,301	1/1:4,13:17:36.09:384,36,0	1/1:2,18:20:39.10:416,39,0	0/0:32,0:35:66.87:0,67,521	1/1:1,20:21:57.14:608,57,0	0/0:2,0:20:36.66:0,37,106	0/0:1,0:20:34.62:0,35,100	1/1:1,14:15:36.03:370,36,0	1/1:3,12:15:8.49:295,8,0	1/1:3,17:20:45.11:480,45,0	0/0:3,0:16:24.44:0,24,71	0/0:11,0:11:26.94:0,27,218	0/0:21,0:21:59.91:0,60,490	0/0:3,0:17:28.51:0,29,82	0/0:19,0:20:49.97:0,50,398	0/0:16,0:16:38.92:0,39,314	0/0:8,0:8:20.97:0,21,172	1/1:0,7:7:15.04:160,15,0	1/1:2,13:15:32.86:352,33,0	1/1:2,15:17:14.44:351,14,0	0/0:1,0:11:20.37:0,20,59	0/0:3,0:23:38.69:0,39,111	0/0:29,0:29:70.99:0,71,587	0/0:13,0:13:23.95:0,24,197
chr10	43133399	.	CAGG	C	979.11	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.113;DP=730;FS=9.048;HRun=0;HaplotypeScore=101.7883;InbreedingCoeff=0.9955;MQ=57.16;MQ0=2;MQRankSum=0.659;QD=42.57;ReadPosRankSum=1.029;VQSLOD=4.9940;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,117,2698	0/0:7,0:7:21.07:0,21,466	0/0:29,0:22:66.23:0,66,1445	0/0:23,0:19:54.19:0,54,1178	0/0:22,0:22:54.17:0,54,1198	0/0:26,0:26:78.27:0,78,1789	0/0:26,0:26:78.27:0,78,1746	0/0:31,0:31:90.30:0,90,2009	0/0:25,0:25:72.25:0,72,1660	0/0:28,0:28:78.26:0,78,1725	0/0:19,0:18:51.18:0,51,1169	0/0:30,0:30:90.30:0,90,2032	0/0:20,0:20:57.20:0,57,1315	0/0:24,0:24:72.25:0,72,1631	0/0:46,0:46:99:0,135,3015	1/1:1,22:23:63.22:1074,63,0	0/0:29,0:29:76.90:0,77,1701	0/0:24,0:24:69.24:0,69,1582	0/0:20,0:19:57.20:0,57,1306	0/0:32,0:32:93.32:0,93,2136	0/0:42,0:41:99:0,120,2716	0/0:27,0:27:75.21:0,75,1662	0/0:29,0:29:81.28:0,81,1840	0/0:32,0:32:96.33:0,96,2206	0/0:14,0:14:42.13:0,42,925	0/0:23,0:23:66.23:0,66,1519	0/0:26,0:25:75.26:0,75,1713	0/0:11,0:11:30.10:0,30,692
chr10	43133664	.	GACAGACACACAC	G	1475.72	PASS	AB=1.000;AC=7;AF=0.130;AN=54;BaseQRankSum=4.129;DP=584;FS=2.327;HRun=0;HaplotypeScore=189.9065;InbreedingCoeff=0.1950;MQ=49.21;MQ0=22;MQRankSum=-3.978;QD=12.61;ReadPosRankSum=1.430;VQSLOD=2.6066;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:33:54:0,54,919	0/0:10,0:10:23.98:0,24,232	./.	0/0:16,0:11:19.51:0,20,184	0/1:20,0:18:99:155,0,142	0/0:17,0:17:9.02:0,9,207	0/0:27,0:26:29.93:0,30,291	0/0:21,0:20:50.60:0,51,384	0/0:19,0:19:9.49:0,9,246	0/0:22,0:21:51.03:0,51,767	0/0:14,0:12:18.05:0,18,669	0/0:30,0:29:55.54:0,56,1426	0/0:18,0:13:29.37:0,29,608	0/0:21,0:20:30.02:0,30,553	0/0:24,0:23:41.96:0,42,424	1/1:4,22:25:20.86:713,21,0	0/0:17,0:17:48.02:0,48,1170	0/0:15,0:14:36.03:0,36,529	0/1:19,0:17:66.29:66,0,213	0/1:27,0:26:99:237,0,209	0/0:35,0:32:27.40:0,27,223	0/0:16,0:15:20.91:0,21,448	0/0:24,0:24:6.30:0,6,178	0/0:40,0:36:11.99:0,12,470	0/0:20,0:19:29.94:0,30,463	0/0:16,0:16:39.04:0,39,739	0/1:20,0:18:99:256,0,181	0/1:5,0:5:6:183,0,6
chr10	43133666	.	CAG	C	337.52	PASS	AB=0.908;AC=9;AF=0.167;AN=54;BaseQRankSum=2.007;DP=579;FS=14.233;HRun=0;HaplotypeScore=128.2460;InbreedingCoeff=0.2885;MQ=47.88;MQ0=21;MQRankSum=-0.979;QD=2.84;ReadPosRankSum=0.749;VQSLOD=1.9069;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:31:28.22:0,28,337	0/0:10,0:10:22.79:0,23,179	./.	0/0:15,0:10:19.47:0,19,184	1/1:21,0:19:2.42:192,2,0	0/0:19,0:19:8.91:0,9,73	0/0:27,0:26:29.79:0,30,252	0/0:20,0:19:50.60:0,51,384	0/0:20,0:20:7.19:0,7,72	0/0:20,0:19:41.87:0,42,393	0/1:12,4:14:38.17:38,0,189	0/0:30,0:29:62.21:0,62,645	0/0:18,0:13:21.93:0,22,245	0/0:18,3:20:29.99:0,30,308	0/0:23,0:22:41.95:0,42,348	1/1:24,0:23:19.84:139,20,0	0/0:17,0:17:23.46:0,23,427	0/1:13,2:14:7.82:8,0,214	0/0:19,0:17:34.94:0,35,289	0/0:27,0:26:37.52:0,38,279	0/0:35,0:32:26.96:0,27,223	0/0:15,1:15:20.89:0,21,169	0/0:24,0:24:5.62:0,6,43	0/0:40,0:36:8.60:0,9,105	0/0:20,0:19:29.69:0,30,235	0/1:15,3:18:86.07:86,0,239	0/1:20,0:18:1.08:1,0,194	0/1:5,0:5:0.94:1,0,14
chr10	43133668	.	GAC	G	542.33	PASS	AB=0.970;AC=24;AF=0.480;AN=50;BaseQRankSum=5.215;DP=588;FS=2.815;HRun=0;HaplotypeScore=130.0320;InbreedingCoeff=0.2703;MQ=47.16;MQ0=24;MQRankSum=-3.548;QD=1.44;ReadPosRankSum=1.509;VQSLOD=2.6166;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:28,4:30:9.02:97,9,0	1/1:8,0:9:2.84:14,3,0	./.	./.	1/1:15,6:19:0.72:50,1,0	0/0:19,0:19:2.37:0,2,8	0/0:24,2:25:2.46:0,2,10	./.	0/1:22,0:22:3.18:16,0,3	0/0:22,0:21:11.82:0,12,92	0/0:17,0:15:16.08:0,16,162	0/1:26,3:28:3.35:3,0,110	0/0:16,0:15:11.69:0,12,121	0/0:20,0:19:6.01:0,6,62	0/0:23,0:25:3.01:0,3,41	1/1:22,2:23:19.85:112,20,0	0/1:17,2:17:43.66:44,0,196	0/1:15,0:14:9.10:9,0,70	0/1:16,0:15:7.96:8,0,8	1/1:19,3:24:14.31:74,14,0	0/1:33,2:31:0:0,0,0	0/1:13,0:16:0.06:0,0,0	0/1:24,0:24:0.31:0,0,0	0/1:42,0:38:0.58:1,0,23	0/0:16,1:18:8.75:0,9,80	0/1:19,0:19:37.41:37,0,102	1/1:17,1:19:20.54:162,21,0	1/1:2,0:5:8.82:61,9,0
chr10	43133670	.	C	CAG	4260.49	PASS	AB=0.958;AC=39;AF=0.722;AN=54;BaseQRankSum=-0.491;DP=595;FS=10.785;HRun=0;HaplotypeScore=128.8273;InbreedingCoeff=-0.0919;MQ=47.08;MQ0=22;MQRankSum=1.813;QD=7.65;ReadPosRankSum=2.888;VQSLOD=4.0690;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:31,1:30:43.87:320,44,0	1/1:8,0:8:19.78:151,20,0	./.	0/0:15,0:10:23.92:0,24,198	0/1:20,1:20:21.13:21,0,178	0/0:4,15:19:2.31:0,2,8	1/1:26,0:25:19.83:205,20,0	1/1:20,0:19:32.34:242,32,0	0/1:6,15:21:34.46:101,0,34	0/1:23,0:22:8.34:264,0,8	0/1:17,0:15:61.37:61,0,72	1/1:28,2:29:25.92:460,26,0	0/1:21,0:16:54.33:147,0,54	1/1:20,0:19:26.91:215,27,0	0/1:26,0:25:19.65:275,0,20	0/1:24,0:23:10.52:11,0,67	0/1:20,0:18:19.74:20,0,362	0/1:17,0:16:46.02:181,0,46	1/1:16,0:14:12.57:171,13,0	1/1:26,0:25:37.79:273,38,0	1/1:36,0:32:14.98:123,15,0	1/1:20,0:19:20.57:158,21,0	1/1:6,0:27:2.39:37,2,0	1/1:9,32:37:3.58:156,4,0	0/1:18,0:17:18.93:128,0,19	0/1:21,0:21:36.74:193,0,37	1/1:20,1:19:27.82:290,28,0	1/1:5,0:5:9.75:57,10,0
chr10	43134157	.	T	TA	15826.87	PASS	AB=0.750;AC=53;AF=0.981;AN=54;BaseQRankSum=-0.187;DP=448;FS=5.946;HRun=0;HaplotypeScore=270.8913;InbreedingCoeff=-0.0254;MQ=40.51;MQ0=0;MQRankSum=-2.857;QD=35.41;ReadPosRankSum=1.003;VQSLOD=3.4898;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,31:33:78.10:1229,78,0	1/1:0,8:9:24.08:374,24,0	./.	0/1:4,1:6:61.15:61,0,86	1/1:2,18:19:18.06:287,18,0	1/1:1,15:15:45.15:717,45,0	1/1:4,18:22:51.17:791,51,0	1/1:5,19:25:73.40:1079,73,0	1/1:2,18:20:50.92:803,51,0	1/1:2,12:14:42.14:644,42,0	1/1:5,11:16:12.04:191,12,0	1/1:1,22:23:66.22:1040,66,0	1/1:1,16:17:45.15:705,45,0	1/1:3,20:23:63.20:967,63,0	1/1:1,20:21:60.19:916,60,0	1/1:1,18:19:54.18:861,54,0	1/1:0,16:16:30.08:458,30,0	1/1:1,6:7:21.03:307,21,0	1/1:2,15:17:48.15:738,48,0	1/1:1,10:11:27.09:428,27,0	1/1:0,15:15:8.64:143,9,0	1/1:1,14:15:27.09:430,27,0	1/1:0,17:16:30.09:478,30,0	1/1:2,13:15:21.07:333,21,0	1/1:3,8:11:21.07:322,21,0	1/1:3,15:18:45.14:687,45,0	1/1:3,14:17:45.15:695,45,0	1/1:0,4:3:9.03:144,9,0
chr10	43134173	.	CG	C	2827.11	PASS	AC=52;AF=0.963;AN=54;BaseQRankSum=3.469;DP=453;FS=0.000;HRun=3;HaplotypeScore=334.4710;InbreedingCoeff=0.4572;MQ=33.64;MQ0=0;MQRankSum=-0.289;QD=6.28;ReadPosRankSum=3.219;VQSLOD=0.2608;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,31:34:62.17:273,62,0	1/1:0,10:10:14.97:58,15,0	./.	0/0:3,0:3:4.42:0,4,38	1/1:3,16:18:12.54:44,13,0	1/1:3,13:16:28.64:127,29,0	1/1:2,25:27:55.85:196,56,0	1/1:3,19:22:44.91:207,45,0	1/1:1,24:25:53.14:210,53,0	1/1:3,11:14:16.92:105,17,0	1/1:3,14:17:6.66:20,7,0	1/1:2,19:21:38.12:154,38,0	1/1:3,11:14:11.48:69,11,0	1/1:2,19:21:39.83:151,40,0	1/1:3,15:18:18.74:128,19,0	1/1:2,16:18:38.73:150,39,0	1/1:4,14:18:24.72:105,25,0	1/1:1,5:6:14.02:69,14,0	1/1:3,16:19:39.32:203,39,0	1/1:1,14:15:13.68:50,14,0	1/1:2,15:17:12.09:40,12,0	1/1:4,14:18:1.10:70,1,0	1/1:2,15:16:14.28:43,14,0	1/1:3,8:11:9.92:32,10,0	1/1:1,11:12:21.46:76,21,0	1/1:2,18:20:45.03:202,45,0	1/1:1,17:18:24.86:117,25,0	1/1:0,3:2:5.34:23,5,0
chr10	43134525	.	C	CT	1529.74	PASS	AB=0.917;AC=7;AF=0.125;AN=56;BaseQRankSum=-8.637;DP=517;FS=1.879;HRun=7;HaplotypeScore=56.0262;InbreedingCoeff=0.8078;MQ=66.29;MQ0=3;MQRankSum=2.274;QD=19.61;ReadPosRankSum=0.120;VQSLOD=3.1799;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:69.11:0,69,666	0/0:8,0:8:23.99:0,24,222	0/1:20,2:13:14.23:14,0,204	0/0:20,0:15:5.86:0,6,150	0/0:22,0:22:57.08:0,57,550	1/1:0,16:16:48.15:580,48,0	1/1:3,14:17:39.12:471,39,0	0/0:27,0:27:69.09:0,69,656	1/1:4,19:23:51.16:613,51,0	0/0:25,0:25:66.09:0,66,633	0/0:22,0:22:63.09:0,63,602	0/0:13,0:13:36.06:0,36,347	0/0:12,0:12:30.04:0,30,290	0/0:14,0:14:39.05:0,39,370	0/0:19,0:19:45.05:0,45,429	0/0:12,0:12:36.06:0,36,348	0/0:31,0:31:87.14:0,87,840	0/0:16,0:16:45.01:0,45,423	0/0:19,0:19:45.03:0,45,426	0/0:23,0:23:59.99:0,60,559	0/0:8,0:8:18.03:0,18,174	0/0:16,0:16:45.07:0,45,434	0/0:21,0:21:53.97:0,54,498	0/0:19,0:19:57.09:0,57,550	0/0:21,0:21:63.04:0,63,593	0/0:16,0:16:48.06:0,48,457	0/0:20,0:20:51.06:0,51,486	0/0:8,0:8:18.02:0,18,173
chr10	43135571	.	TC	T	4018.11	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=14.385;DP=664;FS=5.853;HRun=5;HaplotypeScore=71.7572;InbreedingCoeff=0.9962;MQ=97.68;MQ0=0;MQRankSum=-2.619;QD=31.89;ReadPosRankSum=0.666;VQSLOD=4.2858;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,141,1876	0/0:8,0:8:24.08:0,24,327	0/0:36,0:36:79.67:0,80,1235	0/0:32,0:32:84.15:0,84,1075	0/0:23,0:23:69.22:0,69,926	0/0:18,0:18:51.15:0,51,666	0/0:33,0:33:99:0,99,1352	0/0:35,0:35:84.28:0,84,1146	0/0:27,0:27:78.25:0,78,1050	1/1:0,21:21:63.18:715,63,0	1/1:0,24:24:69.20:783,69,0	0/0:17,0:17:51.17:0,51,695	0/0:17,0:17:48.16:0,48,650	0/0:12,0:12:36.12:0,36,492	1/1:3,22:25:69.08:751,69,0	0/0:15,0:15:45.15:0,45,616	0/0:31,0:31:93.31:0,93,1268	1/1:0,11:11:30.09:340,30,0	0/0:28,0:28:72.23:0,72,960	0/0:25,0:25:72.24:0,72,985	0/0:33,0:33:96.29:0,96,1277	0/0:22,0:22:63.21:0,63,861	0/0:18,0:18:54.18:0,54,738	0/0:24,0:24:69.22:0,69,927	1/1:2,23:25:66.19:749,66,0	1/1:0,20:20:60.17:680,60,0	0/0:29,0:29:87.29:0,87,1189	0/0:5,0:5:15.05:0,15,205
chr10	43136693	.	T	TC	477.40	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-1.709;DP=671;FS=0.000;HRun=4;HaplotypeScore=82.6819;InbreedingCoeff=0.9910;MQ=85.02;MQ0=0;MQRankSum=-2.384;QD=31.83;ReadPosRankSum=0.290;VQSLOD=3.8841;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:90.25:0,90,1020	0/0:10,0:10:30.06:0,30,327	0/0:24,0:24:63.18:0,63,714	0/0:21,0:21:48.10:0,48,530	1/1:1,14:15:42.14:572,42,0	0/0:14,0:14:36.10:0,36,408	0/0:27,0:27:81.17:0,81,895	0/0:25,0:25:75.21:0,75,843	0/0:37,0:37:99:0,99,1123	0/0:25,0:25:66.19:0,66,748	0/0:15,0:15:42.12:0,42,475	0/0:31,0:31:80.83:0,81,899	0/0:22,0:22:56.96:0,57,646	0/0:34,0:34:78.22:0,78,885	0/0:29,0:29:72.20:0,72,817	0/0:18,0:18:45.13:0,45,509	0/0:29,0:28:84.24:0,84,952	0/0:25,0:25:72.16:0,72,802	0/0:20,0:20:48.13:0,48,545	0/0:12,0:12:33.09:0,33,373	0/0:42,0:42:99:0,111,1258	0/0:18,0:18:45.13:0,45,510	0/0:10,0:10:18.05:0,18,204	0/0:24,0:24:66.10:0,66,711	0/0:24,0:23:60.14:0,60,679	0/0:35,0:35:96.26:0,96,1080	0/0:30,0:30:78.22:0,78,884	0/0:13,0:13:39.11:0,39,442
chr10	43137543	.	A	AG	259.62	PASS	AB=0.868;AC=16;AF=0.286;AN=56;BaseQRankSum=2.603;DP=379;FS=8.952;HRun=0;HaplotypeScore=47.7517;InbreedingCoeff=0.6725;MQ=36.23;MQ0=33;MQRankSum=-3.748;QD=2.68;ReadPosRankSum=2.135;VQSLOD=0.7407;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:16,9:20:36.84:37,0,60	1/1:8,0:7:1.72:8,2,0	0/0:17,0:4:11.85:0,12,105	0/0:13,0:8:17.39:0,17,119	0/0:19,0:13:32.78:0,33,256	0/0:11,0:10:26.41:0,26,198	0/0:12,0:8:11.96:0,12,93	1/1:14,0:6:12.46:58,12,0	0/0:12,0:10:23.87:0,24,177	0/0:14,0:9:24.06:0,24,293	0/0:18,0:12:26.93:0,27,276	0/0:7,0:5:11.98:0,12,113	0/0:8,0:7:8.98:0,9,81	0/0:6,0:4:5.97:0,6,48	0/0:16,0:14:35.89:0,36,330	1/1:6,0:1:2.92:17,3,0	0/0:19,0:13:29.13:0,29,267	0/0:15,0:10:18.98:0,19,138	1/1:8,2:2:5.68:40,6,0	1/1:8,0:3:5.31:26,5,0	0/1:6,0:5:7.94:30,0,8	0/0:11,0:8:23.90:0,24,207	0/0:26,0:19:44.22:0,44,341	0/0:16,0:11:26.62:0,27,205	0/0:17,0:9:23.88:0,24,197	0/0:25,0:18:51.08:0,51,598	1/1:10,0:9:23.35:128,23,0	1/1:10,0:6:15.44:91,15,0
chr10	43137547	.	A	AAG	2045.75	PASS	AB=0.964;AC=42;AF=0.750;AN=56;BaseQRankSum=-1.180;DP=393;FS=12.957;HRun=0;HaplotypeScore=44.4766;InbreedingCoeff=0.1601;MQ=35.57;MQ0=74;MQRankSum=-0.274;QD=6.07;ReadPosRankSum=1.159;VQSLOD=1.0340;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:12,4:20:2.72:223,3,0	1/1:4,0:7:9.02:99,9,0	0/0:19,0:4:11.76:0,12,99	0/0:15,0:8:11.25:0,11,119	1/1:21,0:13:17.27:112,17,0	1/1:13,0:11:15.97:73,16,0	1/1:11,0:7:3.68:27,4,0	1/1:10,1:6:14.91:138,15,0	1/1:10,0:10:5.08:85,5,0	0/1:16,0:9:29.26:29,0,31	0/1:22,0:12:29.31:29,0,76	1/1:6,0:5:2.36:64,2,0	1/1:8,0:8:5.97:29,6,0	0/1:7,0:5:5.10:31,0,5	1/1:16,0:15:11.54:125,12,0	1/1:5,0:1:2.68:11,3,0	0/0:22,0:13:30.14:0,30,266	0/1:14,0:10:14.98:15,0,27	1/1:7,0:2:6.01:68,6,0	1/1:10,1:3:5.96:54,6,0	0/1:3,2:5:1.91:78,0,2	0/1:11,0:8:30.41:36,0,30	1/1:27,0:19:18.76:167,19,0	1/1:15,0:11:16.64:112,17,0	0/1:24,0:9:1.64:98,0,2	0/1:22,0:17:4.61:98,0,5	1/1:7,3:9:26.12:196,26,0	1/1:6,3:6:18.05:205,18,0
chr10	43137954	.	T	TA	75.11	PASS	AC=8;AF=0.571;AN=14;BaseQRankSum=3.900;DP=101;FS=19.783;HRun=0;HaplotypeScore=26.6604;MQ=58.73;MQ0=22;MQRankSum=-1.329;QD=8.35;ReadPosRankSum=-1.014;VQSLOD=1.4576;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	1/1:0,1:1:3:26,3,0	0/0:17,0:7:20.84:0,21,237	0/0:19,0:10:13.05:0,13,360	1/1:0,3:3:2.50:39,3,0	./.	./.	./.	./.	./.	1/1:1,3:3:8.99:76,9,0	./.	./.	./.	./.	./.	0/0:30,0:28:78.26:0,78,1090	./.	./.	./.	./.	./.	./.	./.	1/1:0,1:1:3:25,3,0	./.	./.	./.
chr10	43137957	.	T	TATC	222.33	PASS	AC=8;AF=0.571;AN=14;BaseQRankSum=3.530;DP=172;FS=23.419;HRun=0;HaplotypeScore=29.2114;MQ=45.00;MQ0=95;MQRankSum=-0.473;QD=20.21;ReadPosRankSum=-1.880;VQSLOD=1.3539;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	1/1:0,1:1:3.01:57,3,0	0/0:16,0:7:13.04:0,13,279	0/0:18,0:10:9.73:0,10,470	1/1:0,3:3:3.01:34,3,0	./.	./.	./.	./.	./.	1/1:1,3:3:9.03:167,9,0	./.	./.	./.	./.	./.	0/0:34,0:28:78.26:0,78,1416	./.	./.	./.	./.	./.	./.	./.	1/1:2,1:1:3.01:56,3,0	./.	./.	./.
chr10	43139819	.	AAT	A	706.71	PASS	AC=26;AF=0.565;AN=46;BaseQRankSum=3.288;DP=388;DS;FS=2.815;HRun=0;HaplotypeScore=9.1197;InbreedingCoeff=0.5612;MQ=18.91;MQ0=307;MQRankSum=0.066;QD=16.44;ReadPosRankSum=-1.008;VQSLOD=2.8784;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:3,0:3:9.03:0,9,137	./.	./.	./.	0/0:1,0:1:3.01:0,3,50	1/1:2,7:7:15.05:188,15,0	1/1:2,0:1:2.98:22,3,0	0/0:250,0:1:3.01:0,3,50	1/1:0,2:2:3.01:38,3,0	1/1:0,2:2:6.01:63,6,0	./.	1/1:1,1:2:6.02:76,6,0	1/1:2,3:3:6.02:76,6,0	1/1:1,2:2:3.01:38,3,0	1/1:1,0:1:3.01:38,3,0	0/0:1,0:1:3.01:0,3,50	0/0:29,0:8:15.05:0,15,251	1/1:3,4:4:6.02:76,6,0	0/0:42,0:4:12.04:0,12,201	0/0:1,0:1:3.01:0,3,50	0/0:4,0:1:3.01:0,3,50	1/1:0,4:4:8.94:78,9,0	./.	1/1:0,1:1:3.01:38,3,0	1/1:0,1:1:3.01:35,3,0	1/1:0,4:4:8.99:96,9,0	0/0:5,0:4:12.04:0,12,200	0/0:8,0:5:15.05:0,15,246
chr10	43140358	.	A	AACACACACAC	5136.82	PASS	AB=0.790;AC=43;AF=0.768;AN=56;BaseQRankSum=3.496;DP=515;FS=7.182;HRun=0;HaplotypeScore=166.1442;InbreedingCoeff=0.1451;MQ=66.72;MQ0=10;MQRankSum=-1.751;QD=11.17;ReadPosRankSum=-0.022;VQSLOD=2.6429;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:8,0:33:6.02:182,6,0	1/1:2,0:6:3.01:91,3,0	0/0:31,0:20:8.97:0,9,100	0/1:33,0:23:9.72:10,0,353	0/1:1,0:5:0:0,0,0	1/1:15,0:15:20.77:307,21,0	1/1:25,0:25:8.26:407,8,0	0/1:16,0:16:52.79:53,0,76	1/1:16,0:16:11.80:225,12,0	1/1:21,0:20:32.90:536,33,0	1/1:8,0:10:15.52:268,16,0	1/1:25,0:27:14.21:462,14,0	1/1:12,0:12:12.93:280,13,0	1/1:18,0:18:22.17:217,22,0	1/1:8,4:13:9.03:332,9,0	0/1:13,0:14:16.12:85,0,16	0/0:24,0:24:57.15:0,57,1469	1/1:9,3:13:15.01:431,15,0	0/1:12,0:12:71.76:72,0,95	0/1:12,0:12:3.88:4,0,183	0/1:9,0:36:1.40:35,0,1	1/1:13,0:9:11.83:185,12,0	1/1:8,0:7:5.91:65,6,0	1/1:39,0:38:37.96:400,38,0	1/1:8,0:9:6.02:133,6,0	1/1:11,4:19:15.59:306,16,0	0/1:3,0:13:20.54:21,0,31	0/1:3,0:12:32.48:32,0,104
chr10	43140377	.	A	ACACACACACGCACG	3549.65	PASS	AB=0.949;AC=31;AF=0.554;AN=56;BaseQRankSum=0.983;DP=514;FS=3.767;HRun=0;HaplotypeScore=182.7736;InbreedingCoeff=0.2404;MQ=50.56;MQ0=10;MQRankSum=0.609;QD=10.03;ReadPosRankSum=-1.058;VQSLOD=2.3768;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:34,0:33:92.30:92,0,197	1/1:5,0:5:3.01:51,3,0	0/0:19,0:7:6.62:0,7,118	0/0:27,0:17:8.07:0,8,301	0/0:8,0:7:5.75:0,6,74	1/1:16,0:15:19.95:189,20,0	1/1:31,0:28:41.24:624,41,0	0/1:15,0:15:20.63:51,0,21	1/1:8,9:22:10.75:268,11,0	0/1:15,0:14:89.26:248,0,89	1/1:11,0:11:14.67:165,15,0	1/1:27,0:27:29.73:386,30,0	1/1:13,0:12:7.75:283,8,0	1/1:25,0:25:23.86:251,24,0	0/1:12,0:12:87.46:111,0,87	0/1:2,0:14:17.10:17,0,19	0/0:24,0:24:66.16:0,66,1565	0/1:11,0:11:73.22:163,0,73	0/1:17,0:15:15.02:72,0,15	0/0:14,0:14:8.26:0,8,197	0/0:42,0:41:33.72:0,34,369	1/1:11,0:8:10.14:84,10,0	1/1:7,0:6:5.23:56,5,0	1/1:37,0:36:35.25:286,35,0	0/1:11,0:10:62.39:77,0,62	0/1:20,0:20:74.97:75,0,162	0/0:11,0:11:17.11:0,17,245	0/0:13,0:13:24.01:0,24,362
chr10	43140379	.	ACG	A	560.71	PASS	AB=0.969;AC=15;AF=0.268;AN=56;BaseQRankSum=-0.560;DP=512;FS=6.389;HRun=0;HaplotypeScore=117.0314;InbreedingCoeff=-0.1705;MQ=50.05;MQ0=10;MQRankSum=0.170;QD=2.17;ReadPosRankSum=-3.756;VQSLOD=0.5662;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:33:26.83:0,27,214	0/0:4,0:4:3.01:0,3,33	0/0:20,0:7:8.83:0,9,101	0/0:26,0:15:25.51:0,26,246	0/0:8,0:7:5.99:0,6,49	0/1:15,1:15:64.85:65,0,72	0/1:31,2:30:87.70:88,0,325	0/1:15,1:16:11.98:12,0,136	0/0:18,0:18:11.74:0,12,77	0/1:16,0:15:45.68:138,0,46	0/1:11,0:11:0.25:56,0,0	0/1:25,2:27:74.56:86,0,75	0/0:12,1:12:14.94:0,15,140	0/1:26,0:26:32.92:33,0,129	0/0:11,0:11:8.87:0,9,47	0/0:14,0:14:8.79:0,9,87	0/0:23,0:23:66.04:0,66,939	0/1:11,0:11:9.94:10,0,49	0/0:18,0:16:0.54:0,1,111	0/1:13,1:14:32.96:33,0,196	0/0:44,0:43:21.75:0,22,293	0/0:10,0:7:8.66:0,9,62	0/1:7,0:6:15.33:18,0,15	0/1:36,1:36:1.10:1,0,237	1/1:10,0:9:9.34:71,9,0	0/1:21,0:21:28.60:79,0,29	0/0:11,0:11:17.51:0,18,165	0/1:12,1:13:21.75:22,0,177
chr10	43140710	.	T	TTAA	23326.28	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-9.332;DP=552;FS=3.287;HRun=0;HaplotypeScore=78.8592;InbreedingCoeff=0.9075;MQ=89.15;MQ0=0;MQRankSum=-7.738;QD=51.04;ReadPosRankSum=2.256;VQSLOD=7.2523;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,40:42:99:2114,102,0	1/1:0,3:3:9.03:204,9,0	0/0:26,0:26:63.06:0,63,975	0/0:24,0:24:57.19:0,57,894	1/1:0,5:5:14.95:201,15,0	1/1:2,13:15:39.13:806,39,0	1/1:7,25:34:78.26:1637,78,0	1/1:4,12:16:38.83:820,39,0	1/1:2,20:22:66.23:1448,66,0	1/1:5,9:14:33.11:686,33,0	1/1:0,4:4:9.03:203,9,0	1/1:2,29:32:78.17:1655,78,0	1/1:0,28:28:75.26:1698,75,0	1/1:3,18:23:57.19:1236,57,0	1/1:1,16:17:45.15:987,45,0	1/1:2,19:21:51.17:1124,51,0	0/0:45,0:45:99:0,132,2157	1/1:2,22:24:63.22:1393,63,0	1/1:5,9:17:42.10:783,42,0	1/1:0,2:2:6.01:66,6,0	1/1:4,23:27:38.83:843,39,0	1/1:0,7:7:21.03:367,21,0	1/1:0,6:7:11.83:240,12,0	1/1:0,25:26:54.19:1224,54,0	1/1:0,10:10:21.07:459,21,0	1/1:2,23:25:63.17:1338,63,0	1/1:2,20:22:57.19:1212,57,0	1/1:1,13:14:27.09:583,27,0
chr10	43141109	.	C	CCT	81.43	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.763;DP=514;FS=2.153;HRun=0;HaplotypeScore=87.8570;InbreedingCoeff=0.5688;MQ=71.42;MQ0=16;MQRankSum=-1.422;QD=5.82;ReadPosRankSum=1.206;VQSLOD=3.1358;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:2.80:0,3,39	0/0:3,0:3:3.01:0,3,37	0/0:64,0:27:51.18:0,51,834	0/0:70,0:25:53.49:0,53,689	0/0:21,0:21:48.12:0,48,644	0/0:11,0:11:30.10:0,30,408	0/0:20,0:20:57.12:0,57,776	0/0:26,0:26:48.14:0,48,620	0/0:10,0:10:21.06:0,21,274	0/0:14,0:13:36.11:0,36,490	0/0:8,0:8:15.05:0,15,210	0/0:9,0:9:27.08:0,27,361	0/0:10,0:10:30.10:0,30,403	0/0:11,0:10:26.53:0,27,316	0/0:7,0:7:21.07:0,21,295	1/1:4,10:13:9.03:164,9,0	0/0:28,0:28:78.25:0,78,1099	0/0:9,0:9:24.05:0,24,307	0/0:11,0:11:30.04:0,30,361	0/0:14,0:14:14.72:0,15,214	0/0:19,0:19:3.01:0,3,42	0/0:12,0:12:24.08:0,24,327	0/0:9,0:9:27.09:0,27,375	0/0:39,0:39:99:0,105,1463	0/0:21,0:17:51.17:0,51,713	0/0:13,0:13:36.57:0,37,480	0/0:13,0:13:27.07:0,27,334	0/0:10,0:10:21.95:0,22,291
chr10	43141120	.	T	TCGCGCGCG	1765.98	PASS	AB=0.950;AC=14;AF=0.250;AN=56;BaseQRankSum=6.080;DP=608;FS=25.727;HRun=0;HaplotypeScore=166.3293;InbreedingCoeff=0.4456;MQ=59.18;MQ0=29;MQRankSum=-8.452;QD=12.99;ReadPosRankSum=-2.224;VQSLOD=1.1852;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:20:3.48:56,3,0	1/1:3,0:3:3.48:64,3,0	0/0:57,0:20:50.31:0,50,1216	0/0:68,0:23:48.56:0,49,979	0/0:29,0:28:50.65:0,51,839	0/0:16,0:15:36.11:0,36,955	0/0:26,0:24:53.28:0,53,1467	0/1:21,0:21:54.55:320,0,55	0/0:12,0:11:15.03:0,15,352	0/0:21,0:19:48.49:0,48,1120	0/0:14,0:14:18.05:0,18,458	0/0:14,0:14:30.97:0,31,707	0/0:15,0:15:28.60:0,29,646	0/0:11,0:10:17.05:0,17,531	0/0:11,0:11:21.96:0,22,566	1/1:12,0:11:8.96:79,9,0	0/0:37,0:37:90.43:0,90,1880	0/0:11,0:8:0.22:0,0,446	0/1:18,4:24:99:810,0,161	1/1:13,0:13:2.37:35,2,0	1/1:16,0:15:2.74:50,3,0	0/0:18,0:18:11.10:0,11,603	0/0:10,0:10:26.76:0,27,700	0/0:56,0:56:46.60:0,47,2873	0/0:27,0:22:39.61:0,40,1078	0/0:19,0:17:42.94:0,43,1034	0/1:14,0:13:2.12:394,0,2	0/1:11,0:8:31.10:111,0,31
chr10	43146291	.	G	GCCCAC	9371.96	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-12.412;DP=812;FS=0.380;HRun=0;HaplotypeScore=160.9653;InbreedingCoeff=0.9958;MQ=86.23;MQ0=0;MQRankSum=-4.394;QD=60.86;ReadPosRankSum=4.472;VQSLOD=5.5330;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:59,0:59:99:0,172,3490	0/0:8,0:8:21.07:0,21,430	0/0:34,0:34:71.57:0,72,1497	0/0:35,0:35:63.18:0,63,1464	0/0:18,0:18:45.14:0,45,860	0/0:13,0:13:39.13:0,39,798	0/0:36,0:36:96.33:0,96,1954	0/0:30,0:30:69.23:0,69,1380	0/0:37,0:37:99:0,99,1973	1/1:8,21:27:54.19:1623,54,0	1/1:6,8:12:18.06:547,18,0	0/0:25,0:25:72.23:0,72,1420	0/0:29,0:29:78.25:0,78,1563	0/0:33,0:33:96.30:0,96,1882	1/1:3,37:40:99:3131,105,0	0/0:38,0:38:99:0,114,2315	0/0:35,0:35:93.32:0,93,1903	1/1:6,17:24:45.15:1336,45,0	0/0:30,0:30:78.27:0,78,1574	0/0:27,0:27:75.26:0,75,1526	0/0:55,0:55:99:0,157,3113	0/0:28,0:28:72.23:0,72,1440	0/0:17,0:17:36.11:0,36,695	0/0:38,0:38:99:0,102,2050	1/1:6,11:17:30.06:842,30,0	1/1:6,21:27:66.23:1892,66,0	0/0:25,0:25:72.21:0,72,1388	0/0:8,0:8:18.06:0,18,369
chr10	43147317	.	GT	G	5414.35	PASS	AB=0.993;AC=50;AF=0.893;AN=56;BaseQRankSum=5.331;DP=455;FS=3.821;HRun=1;HaplotypeScore=151.2150;InbreedingCoeff=-0.0668;MQ=51.21;MQ0=1;MQRankSum=-4.113;QD=11.90;ReadPosRankSum=8.252;VQSLOD=3.2014;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:22:0.25:214,0,0	1/1:8,0:8:20.31:118,20,0	0/1:13,0:10:4.15:4,0,145	0/1:20,0:17:48.42:48,0,118	1/1:18,3:21:46.08:285,46,0	1/1:19,0:19:34.77:199,35,0	0/1:20,0:20:16.72:176,0,17	0/1:23,1:24:38.71:212,0,39	1/1:17,0:17:47.17:303,47,0	1/1:20,0:19:52.95:297,53,0	1/1:11,0:11:25.20:130,25,0	1/1:19,0:19:37.74:222,38,0	1/1:11,0:11:3.73:121,4,0	1/1:17,0:17:43.97:272,44,0	1/1:18,1:18:49.61:326,50,0	1/1:14,0:14:40.31:228,40,0	1/1:15,0:15:37.77:220,38,0	1/1:19,0:19:24.56:206,25,0	1/1:12,0:11:2.24:123,2,0	1/1:18,2:20:49.44:321,49,0	0/1:21,0:21:27.39:106,0,27	1/1:11,1:12:23.67:157,24,0	1/1:7,0:7:17.75:116,18,0	0/1:19,0:19:15.92:128,0,16	1/1:11,1:12:31.70:227,32,0	1/1:17,3:20:54.17:365,54,0	1/1:12,0:12:28.84:175,29,0	1/1:10,0:10:24.79:115,25,0
chr10	43148063	.	TA	T	4085.94	PASS	AB=0.768;AC=49;AF=0.875;AN=56;BaseQRankSum=1.344;DP=531;FS=8.221;HRun=13;HaplotypeScore=84.1977;InbreedingCoeff=0.2589;MQ=56.74;MQ0=19;MQRankSum=1.387;QD=8.04;ReadPosRankSum=2.470;VQSLOD=2.5514;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,0:25:30.21:89,30,0	1/1:0,0:9:16.30:48,16,0	0/1:8,0:4:15.33:15,0,21	0/1:13,0:8:10.65:11,0,45	1/1:5,12:18:28.80:203,29,0	1/1:4,17:20:9.54:233,10,0	0/1:9,10:16:8.35:110,0,8	1/1:1,0:18:34.63:101,35,0	1/1:6,14:20:28.12:202,28,0	1/1:9,15:24:43.43:311,43,0	1/1:3,11:13:19.61:225,20,0	1/1:5,5:11:12.93:77,13,0	1/1:8,11:17:9.57:231,10,0	1/1:1,12:13:25.98:195,26,0	1/1:5,13:17:35.76:263,36,0	1/1:6,1:28:33.48:111,33,0	0/0:22,1:19:26.13:0,26,405	0/1:7,15:21:0.02:240,0,0	1/1:4,0:18:28.28:82,28,0	1/1:3,0:21:30.09:89,30,0	1/1:5,0:24:36.65:108,37,0	1/1:8,17:25:14.61:275,15,0	1/1:4,14:19:44.88:302,45,0	1/1:4,9:13:13.94:93,14,0	0/1:4,7:12:1.24:137,0,1	1/1:6,8:15:26.91:168,27,0	1/1:3,0:25:38.43:113,38,0	1/1:7,0:21:17.56:53,18,0
chr10	43148171	.	TTTTTTTTTTTG	T	5966.87	PASS	AB=0.954;AC=26;AF=0.464;AN=56;BaseQRankSum=7.059;DP=553;FS=9.523;HRun=0;HaplotypeScore=218.7028;InbreedingCoeff=0.2108;MQ=48.18;MQ0=10;MQRankSum=-6.986;QD=19.06;ReadPosRankSum=11.714;VQSLOD=1.3022;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:18,12:30:45.80:935,46,0	1/1:1,11:12:18.45:323,18,0	0/0:47,0:10:19.05:0,19,314	0/0:35,0:9:15.51:0,16,78	0/0:19,0:19:6.38:0,6,257	0/1:18,0:17:19.51:20,0,75	0/1:14,0:14:5.58:6,0,93	1/1:9,10:18:2.74:745,3,0	0/1:14,0:14:5.68:6,0,159	0/0:23,0:23:8.75:0,9,372	0/0:21,0:21:36.10:0,36,476	0/1:17,0:17:29.56:30,0,87	0/1:15,0:13:14.30:14,0,97	0/1:17,0:17:24.11:24,0,48	0/1:22,0:21:19.07:19,0,41	0/1:3,18:20:8.50:561,0,8	0/0:31,0:30:60.16:0,60,2217	0/0:15,0:15:8.97:0,9,342	1/1:4,22:25:0.87:1032,1,0	1/1:3,18:21:50.79:910,51,0	1/1:7,2:9:14.87:229,15,0	0/1:10,0:10:9.54:10,0,79	0/0:16,0:16:12.54:0,13,297	0/0:12,0:12:4.57:0,5,83	0/0:20,0:20:13.97:0,14,156	0/1:15,0:14:19.79:20,0,194	1/1:5,20:25:23.49:692,23,0	1/1:3,5:8:15.05:393,15,0
chr10	43148172	.	TTTTTTTTTTG	T	5886.43	PASS	AB=0.990;AC=32;AF=0.571;AN=56;BaseQRankSum=7.660;DP=549;FS=19.413;HRun=0;HaplotypeScore=209.9839;InbreedingCoeff=-0.2581;MQ=49.13;MQ0=10;MQRankSum=-7.374;QD=13.59;ReadPosRankSum=11.112;VQSLOD=1.0275;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:30:69.59:713,70,0	1/1:11,0:12:18.34:253,18,0	0/0:48,0:10:16.98:0,17,280	0/0:37,0:11:17.01:0,17,60	0/1:19,0:19:70.45:70,0,194	0/1:18,0:17:7.10:170,0,7	0/1:16,0:16:82.71:91,0,83	0/1:14,4:18:1.34:668,0,1	0/1:14,0:14:85.77:86,0,99	0/1:22,0:22:60.33:60,0,250	0/1:21,0:21:13.27:13,0,332	0/1:17,0:17:54.35:190,0,54	0/1:14,0:12:58.42:119,0,58	0/1:17,0:17:4.48:176,0,4	0/1:21,0:20:2.36:133,0,2	1/1:20,1:20:3.49:436,3,0	0/0:31,0:30:60.11:0,60,1965	0/1:15,0:15:60.52:61,0,213	0/1:26,0:24:10.66:690,0,11	1/1:20,1:21:49.90:635,50,0	1/1:8,0:8:17.74:165,18,0	0/1:10,0:10:58.94:79,0,59	0/1:16,0:16:44.51:45,0,211	0/1:12,0:12:33.15:33,0,42	0/1:19,0:19:62.36:62,0,68	0/1:15,0:14:81.34:81,0,89	1/1:21,1:21:28.61:557,29,0	1/1:8,0:8:15.05:300,15,0
chr10	43148174	.	TTTTTTTTG	T	8970.37	PASS	AB=0.986;AC=39;AF=0.696;AN=56;BaseQRankSum=7.185;DP=526;FS=25.208;HRun=0;HaplotypeScore=177.2526;InbreedingCoeff=0.0182;MQ=47.77;MQ0=10;MQRankSum=-8.117;QD=21.99;ReadPosRankSum=10.621;VQSLOD=1.9859;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:25:58.30:633,58,0	1/1:12,0:12:18.41:223,18,0	0/0:50,0:10:11.53:0,12,232	0/0:37,0:11:17.25:0,17,69	0/1:19,0:19:99:281,0,124	1/1:18,0:17:40.93:585,41,0	0/1:16,0:16:44.23:323,0,44	1/1:18,0:17:11.45:473,11,0	0/1:14,0:14:45.91:277,0,46	0/1:18,2:20:99:302,0,146	0/1:17,0:17:99:179,0,162	1/1:17,0:17:6.38:584,6,0	1/1:14,0:12:4.75:382,5,0	1/1:16,0:16:15.26:559,15,0	1/1:17,1:17:26.98:489,27,0	1/1:21,0:20:27.44:396,27,0	0/0:31,0:30:60.11:0,60,1552	0/1:13,1:14:63.45:259,0,63	0/1:26,0:24:6.99:560,0,7	1/1:21,0:21:50.56:572,51,0	1/1:8,0:8:17.88:161,18,0	0/1:9,0:9:19.94:250,0,20	0/1:16,0:16:47.28:204,0,47	0/1:12,0:12:62.36:102,0,62	1/1:16,0:16:1.99:294,2,0	0/1:11,0:11:97.97:179,0,98	1/1:22,0:21:28.93:454,29,0	1/1:8,0:8:15.05:249,15,0
chr10	43148181	.	TG	T	1609.51	PASS	AB=0.953;AC=21;AF=0.375;AN=56;BaseQRankSum=1.381;DP=535;FS=1.363;HRun=1;HaplotypeScore=155.3302;InbreedingCoeff=0.7761;MQ=47.77;MQ0=9;MQRankSum=-2.918;QD=6.34;ReadPosRankSum=-0.445;VQSLOD=0.2186;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:24:64.84:439,65,0	1/1:12,0:12:16.88:95,17,0	0/1:43,3:11:19.23:19,0,113	0/1:33,1:11:17.75:18,0,23	0/0:23,0:23:48.94:0,49,305	0/0:17,0:16:39.54:0,40,185	0/0:17,0:17:37.70:0,38,201	1/1:15,0:15:26.50:129,26,0	0/0:14,0:14:39.17:0,39,238	0/0:19,0:19:20.71:0,21,223	0/0:16,0:16:38.39:0,38,217	0/0:17,0:17:44.88:0,45,199	0/0:14,0:12:31.56:0,32,152	0/0:18,0:18:47.31:0,47,240	0/1:18,0:18:4.52:5,0,49	1/1:21,0:20:11.90:123,12,0	0/0:23,10:32:58.47:0,58,467	0/0:19,0:19:31.76:0,32,292	1/1:24,0:22:52.09:338,52,0	1/1:21,0:21:49.68:309,50,0	1/1:7,0:9:20.74:149,21,0	0/0:10,0:10:26.75:0,27,145	0/0:17,0:17:44.81:0,45,263	0/0:14,0:14:19.92:0,20,125	0/0:16,0:17:12.59:0,13,109	0/0:16,0:16:34.60:0,35,259	1/1:21,1:21:28.46:143,28,0	1/1:7,0:7:13.28:56,13,0
chr10	43149418	.	C	CA	4490.27	PASS	AC=44;AF=1.000;AN=44;DP=498;FS=0.000;HRun=1;HaplotypeScore=127.5703;InbreedingCoeff=-0.0616;MQ=36.67;MQ0=0;QD=11.11;VQSLOD=3.0237;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	./.	1/1:2,3:4:8.99:111,9,0	./.	./.	1/1:1,11:12:3.01:45,3,0	1/1:3,16:20:12:154,12,0	1/1:4,13:18:48.14:603,48,0	1/1:1,20:23:9.03:130,9,0	1/1:0,28:29:61.05:796,61,0	./.	1/1:3,19:22:2.97:20,3,0	1/1:3,17:21:9.03:114,9,0	./.	1/1:3,21:24:6.01:66,6,0	1/1:4,26:32:15.04:200,15,0	1/1:3,4:8:6.02:72,6,0	1/1:0,7:7:15.05:193,15,0	1/1:0,9:9:27.08:326,27,0	1/1:3,14:18:11.98:128,12,0	1/1:5,12:18:21.01:258,21,0	1/1:2,17:20:5.98:55,6,0	1/1:0,0:23:3.01:35,3,0	1/1:1,18:24:15.05:203,15,0	1/1:0,0:20:3.01:36,3,0	1/1:0,29:31:58.05:717,58,0	1/1:0,10:10:11.72:133,12,0	1/1:0,10:10:6.02:93,6,0
chr10	43154994	.	TTGGGTGTGTGTGTGTGTG	T	5922.62	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=6.188;DP=557;FS=17.611;HRun=0;HaplotypeScore=240.7987;InbreedingCoeff=0.8523;MQ=65.42;MQ0=6;MQRankSum=-0.792;QD=37.72;ReadPosRankSum=3.107;VQSLOD=2.6743;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:4,20:25:27.09:1290,27,0	1/1:2,0:2:5.99:50,6,0	0/0:27,0:19:54.03:0,54,819	0/0:26,0:20:29.20:0,29,993	0/0:13,0:13:13.43:0,13,298	0/0:21,0:25:50.95:0,51,1539	0/0:29,0:29:61.11:0,61,1966	1/1:27,0:27:73.55:619,74,0	0/0:21,0:21:49.83:0,50,878	0/0:24,0:24:66.17:0,66,3448	0/0:14,0:13:23.87:0,24,679	0/0:18,0:18:12.02:0,12,388	0/0:15,0:15:26.74:0,27,1082	0/0:16,0:16:9.02:0,9,381	0/0:19,0:19:39.02:0,39,1428	1/1:0,0:20:32.98:961,33,0	0/0:38,0:38:99:0,102,5617	0/0:19,0:19:35.02:0,35,1825	1/1:3,13:16:38.86:439,39,0	1/1:2,13:15:11.88:1109,12,0	0/1:25,0:23:31.73:213,0,32	0/0:13,0:12:20.82:0,21,504	0/0:11,0:11:14.98:0,15,258	0/0:37,0:37:9.90:0,10,441	0/0:10,0:10:24.01:0,24,768	0/0:21,0:24:70.41:0,70,3541	1/1:0,14:16:18.49:776,18,0	1/1:0,10:10:9.03:466,9,0
chr10	43154995	.	TGG	T	1799.56	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=6.267;DP=551;FS=21.714;HRun=3;HaplotypeScore=134.8436;InbreedingCoeff=0.9400;MQ=64.64;MQ0=6;MQRankSum=-1.048;QD=12.00;ReadPosRankSum=2.733;VQSLOD=-0.4429;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:23:26.06:181,26,0	1/1:2,0:2:5.99:50,6,0	0/0:26,0:18:53.98:0,54,520	0/0:26,0:20:22.33:0,22,403	0/0:13,0:13:10.58:0,11,93	0/0:25,0:25:26.65:0,27,364	0/0:30,0:30:44.02:0,44,540	1/1:3,25:27:75.19:598,75,0	0/0:22,0:22:49.90:0,50,424	0/0:25,0:25:65.85:0,66,590	0/0:14,0:13:23.70:0,24,189	0/0:18,0:18:11.81:0,12,97	0/0:16,0:15:23.14:0,23,231	0/0:16,0:16:8.96:0,9,76	0/0:19,0:19:38.96:0,39,372	1/1:20,0:20:32.73:245,33,0	0/0:37,0:37:94.21:0,94,1304	0/0:19,0:19:32.30:0,32,391	1/1:14,0:14:35.87:286,36,0	1/1:14,0:14:23.86:176,24,0	1/1:23,0:21:32.95:271,33,0	0/0:13,0:12:18.37:0,18,141	0/0:11,0:11:14.96:0,15,122	0/0:37,0:37:10.92:0,11,83	0/0:10,0:10:23.73:0,24,201	0/0:24,0:24:44.20:0,44,454	1/1:16,0:16:17.91:133,18,0	1/1:10,0:10:8.97:68,9,0
chr10	43154997	.	G	GGTGTGGGTGTGTGT	6034.26	PASS	AB=0.724;AC=26;AF=0.464;AN=56;BaseQRankSum=-4.090;DP=588;FS=10.436;HRun=0;HaplotypeScore=235.1410;InbreedingCoeff=0.4597;MQ=61.42;MQ0=8;MQRankSum=-3.020;QD=16.86;ReadPosRankSum=-5.386;VQSLOD=1.4135;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:23.78:0,24,470	0/0:2,0:2:3:0,3,25	0/0:24,0:16:48:0,48,463	0/0:25,0:19:50.89:0,51,518	1/1:13,0:13:14.12:200,14,0	1/1:25,0:25:53.07:643,53,0	1/1:32,0:32:60.68:685,61,0	0/0:27,0:26:63.59:0,64,500	1/1:24,0:24:56.80:716,57,0	0/1:18,0:30:99:503,0,298	0/1:9,0:18:38.07:49,0,38	1/1:3,12:19:6.47:412,6,0	1/1:17,0:15:32.73:666,33,0	1/1:1,12:24:6.02:407,6,0	0/1:12,0:25:9.05:9,0,125	0/0:20,0:20:31.91:0,32,814	0/0:34,0:36:63.25:0,63,2336	0/1:13,0:24:86.81:87,0,113	0/0:14,0:13:32.87:0,33,331	0/0:14,0:14:23.49:0,23,430	0/0:20,0:18:32.95:0,33,273	1/1:13,0:12:21:534,21,0	1/1:2,0:13:2.24:147,2,0	1/1:5,1:43:3.11:353,3,0	0/1:5,0:12:46:46,0,83	0/1:25,0:25:99:579,0,233	0/0:16,0:16:18.48:0,18,449	0/0:10,0:10:9.03:0,9,233
chr10	43155343	.	A	ACACTCAAG	68.97	PASS	AC=2;AF=1.00;AN=2;DP=8;FS=0.000;HRun=0;HaplotypeScore=4.8968;MQ=17.35;MQ0=0;QD=34.48;VQSLOD=2.2345;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	1/1:0,2:2:3.01:129,3,0	./.	./.	./.	./.	./.	./.	./.
chr10	43157590	.	C	CAAAG	13974.41	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=10.514;DP=648;FS=6.010;HRun=0;HaplotypeScore=119.2575;InbreedingCoeff=0.9954;MQ=79.03;MQ0=1;MQRankSum=-14.361;QD=63.23;ReadPosRankSum=-2.059;VQSLOD=6.4509;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,37:46:99:2800,111,0	1/1:2,9:11:30.07:713,30,0	0/0:22,0:22:63.22:0,63,1208	0/0:22,0:22:20.32:0,20,1040	0/0:12,0:12:36.11:0,36,664	0/0:21,0:21:57.19:0,57,1103	0/0:36,0:36:99:0,105,1967	1/1:6,19:26:72.23:1845,72,0	0/0:19,0:19:54.19:0,54,1047	0/0:26,0:26:72.24:0,72,1361	0/0:18,0:18:54.19:0,54,1047	0/0:32,0:32:93.32:0,93,1796	0/0:19,0:19:54.18:0,54,1047	0/0:24,0:24:69.22:0,69,1304	0/0:32,0:32:90.29:0,90,1698	1/1:0,26:26:72.25:1855,72,0	0/0:26,0:26:75.26:0,75,1426	0/0:24,0:24:69.20:0,69,1269	1/1:6,8:16:42.13:1063,42,0	1/1:0,11:11:33.11:853,33,0	1/1:7,39:46:99:2479,102,0	0/0:16,0:16:42.14:0,42,814	0/0:6,0:6:18.06:0,18,349	0/0:29,0:29:87.28:0,87,1652	0/0:22,0:22:57.20:0,57,1081	0/0:21,0:21:63.22:0,63,1220	1/1:3,27:31:78.23:2045,78,0	1/1:2,4:5:15.05:321,15,0
chr10	43158045	.	G	GA	9094.79	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=-8.483;DP=655;FS=1.017;HRun=10;HaplotypeScore=128.9747;InbreedingCoeff=0.9112;MQ=69.05;MQ0=1;MQRankSum=-1.213;QD=23.08;ReadPosRankSum=-1.573;VQSLOD=3.1954;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,35:42:62.20:823,62,0	1/1:1,11:12:30.08:320,30,0	0/0:13,0:12:3.02:0,3,101	0/0:10,0:10:11.96:0,12,101	1/1:7,24:31:4.55:600,5,0	0/0:17,0:17:44.92:0,45,366	0/0:23,0:23:59.92:0,60,492	1/1:10,21:32:68.83:695,69,0	0/0:21,0:21:59.93:0,60,493	1/1:2,25:27:75.18:792,75,0	1/1:1,16:18:23.37:425,23,0	0/0:26,0:26:68.84:0,69,556	0/0:13,1:14:2.78:0,3,219	0/0:26,0:26:74.91:0,75,615	1/1:5,26:32:69.01:716,69,0	1/1:4,20:26:19.65:587,20,0	0/0:38,1:39:98.48:0,98,808	1/1:5,21:26:54.61:577,55,0	1/1:3,15:20:50.83:508,51,0	1/1:3,22:24:57.11:596,57,0	1/1:3,20:23:51.13:544,51,0	0/0:19,0:19:53.92:0,54,443	0/0:23,0:23:56.91:0,57,468	0/0:30,0:30:77.90:0,78,640	1/1:1,13:15:41.94:427,42,0	1/1:7,16:23:48.12:512,48,0	1/1:5,31:37:87.05:909,87,0	1/1:1,3:4:6.02:64,6,0
chr10	43159008	.	T	TA	3172.79	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-11.188;DP=323;FS=10.169;HRun=9;HaplotypeScore=40.4794;InbreedingCoeff=0.9209;MQ=60.77;MQ0=3;MQRankSum=-0.582;QD=22.66;ReadPosRankSum=-0.831;VQSLOD=3.4662;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,21:24:57.15:630,57,0	1/1:0,3:3:9.02:100,9,0	0/0:4,0:3:5.94:0,6,50	0/0:4,0:3:7.55:0,8,54	1/1:1,12:13:36.06:385,36,0	0/0:11,0:11:23.98:0,24,208	0/0:10,0:10:29.99:0,30,260	1/1:7,20:27:57.12:613,57,0	0/0:8,0:8:20.99:0,21,182	0/0:14,0:14:35.99:0,36,312	0/0:8,0:8:24:0,24,208	0/0:9,0:9:14.97:0,15,126	0/0:5,0:5:12:0,12,104	0/0:12,0:12:32.97:0,33,283	0/0:9,0:9:20.49:0,20,165	1/1:0,7:7:18.05:199,18,0	0/0:20,0:20:47.99:0,48,417	0/0:18,0:17:35.99:0,36,312	1/1:5,15:19:45.12:498,45,0	1/1:1,14:15:16.07:405,16,0	1/1:3,9:12:12.03:133,12,0	0/0:2,0:2:6:0,6,52	0/0:12,0:12:26.92:0,27,222	0/0:7,0:7:15:0,15,130	0/0:14,0:14:41.99:0,42,365	0/0:16,0:16:47.99:0,48,417	1/1:3,12:15:30.07:324,30,0	1/1:0,4:4:9.02:100,9,0
chr10	43161044	.	GGAAGGAAGGAAGGA	G	1578.92	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=-0.469;DP=557;FS=2.913;HRun=0;HaplotypeScore=255.9668;InbreedingCoeff=0.4916;MQ=44.78;MQ0=12;MQRankSum=-3.330;QD=17.94;ReadPosRankSum=-0.524;VQSLOD=2.4916;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:4,25:29:36.12:1256,36,0	1/1:1,5:6:9.03:383,9,0	0/0:17,0:1:3.01:0,3,49	0/0:22,0:8:20.94:0,21,430	0/0:25,0:23:48.62:0,49,1396	0/0:16,0:15:38.70:0,39,876	0/1:11,0:9:2.32:2,0,693	0/1:23,0:21:5.77:6,0,820	0/0:15,0:15:18.05:0,18,487	0/0:20,0:19:57.18:0,57,2369	0/0:15,0:15:39.13:0,39,1672	0/0:13,0:13:36.12:0,36,1480	0/0:17,0:17:42.14:0,42,1492	0/0:20,0:20:48.16:0,48,1497	0/0:22,0:21:48.16:0,48,2141	0/0:28,0:28:9.02:0,9,196	0/0:35,0:35:40.05:0,40,4206	0/0:18,0:18:51.17:0,51,2601	0/0:19,0:18:53.16:0,53,1212	0/0:11,0:10:17.42:0,17,465	0/0:17,0:17:23.85:0,24,412	0/0:31,0:29:84.29:0,84,2846	0/0:25,0:25:67.17:0,67,2159	0/0:20,0:20:28.45:0,28,829	0/0:17,0:17:36.12:0,36,2131	0/0:29,0:29:78.27:0,78,3524	0/0:17,0:17:16.52:0,17,438	0/1:19,0:18:59.57:60,0,392
chr10	43161056	.	GGA	G	1266.38	PASS	AB=0.964;AC=19;AF=0.339;AN=56;BaseQRankSum=4.514;DP=558;FS=0.508;HRun=0;HaplotypeScore=167.9743;InbreedingCoeff=0.5272;MQ=52.26;MQ0=9;MQRankSum=-4.062;QD=5.92;ReadPosRankSum=-2.741;VQSLOD=2.8860;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:26:36.27:397,36,0	1/1:5,0:5:8.95:67,9,0	0/1:32,1:12:15.96:16,0,255	0/0:29,0:14:31.52:0,32,423	0/0:22,0:20:33.11:0,33,550	0/1:13,0:12:14.31:14,0,313	0/0:11,0:10:24.08:0,24,397	1/1:25,0:23:27.03:336,27,0	0/0:14,0:14:9.03:0,9,149	0/0:20,0:19:48.16:0,48,784	0/0:15,0:15:30.99:0,31,512	0/1:12,0:12:9.14:9,0,370	0/0:17,0:17:28.48:0,28,626	0/0:22,0:22:5.87:0,6,595	0/0:19,0:18:34.36:0,34,539	1/1:26,0:26:2.66:12,3,0	0/0:38,0:38:70.32:0,70,1523	0/0:16,0:16:42.14:0,42,683	1/1:19,0:18:31.96:253,32,0	0/1:12,0:11:6.87:37,0,7	1/1:11,0:11:12.01:135,12,0	0/0:31,0:29:30.44:0,30,835	0/0:24,0:24:31.48:0,31,659	0/0:19,0:19:14.73:0,15,250	0/0:18,0:18:32.87:0,33,553	0/0:29,0:29:75.26:0,75,1241	1/1:12,2:14:0.23:73,0,0	0/1:14,3:17:6.92:102,0,7
chr10	43161058	.	A	AAGGAAGGAAGGAAG	5490.04	PASS	AB=0.982;AC=24;AF=0.429;AN=56;BaseQRankSum=-1.716;DP=554;FS=13.217;HRun=0;HaplotypeScore=257.5441;InbreedingCoeff=0.2208;MQ=52.33;MQ0=9;MQRankSum=-6.509;QD=16.05;ReadPosRankSum=-6.609;VQSLOD=0.9803;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:28:99:140,0,272	0/0:5,0:5:8.82:0,9,104	0/1:33,0:12:16.28:16,0,255	0/0:33,0:17:34.44:0,34,510	0/1:17,0:17:99:185,0,234	0/1:12,0:11:99:289,0,316	0/0:9,0:9:24.08:0,24,440	1/1:9,0:25:57.94:822,58,0	0/0:11,0:11:9.03:0,9,127	0/0:20,0:19:57.16:0,57,1713	0/0:16,0:16:39.13:0,39,1304	0/1:9,0:12:99:292,0,357	0/1:15,0:16:88.03:88,0,473	0/1:17,0:22:99:270,0,546	0/0:18,0:18:36.12:0,36,1291	1/1:0,23:28:3.01:216,3,0	0/0:38,0:38:99:0,106,2689	0/0:16,0:16:48.12:0,48,1614	1/1:2,0:15:45.15:1030,45,0	1/1:3,0:12:13.86:377,14,0	1/1:3,0:11:18.06:330,18,0	0/1:26,0:27:99:454,0,816	0/1:19,0:23:99:370,0,625	0/1:15,0:18:85.21:85,0,241	0/0:18,0:18:35.19:0,35,1366	0/0:28,0:28:78.27:0,78,2670	1/1:4,0:16:15.01:334,15,0	1/1:3,0:18:15.05:192,15,0
chr10	43161103	.	GGAGAGGAGTA	G	8949.50	PASS	AB=1.000;AC=39;AF=0.696;AN=56;BaseQRankSum=-4.489;DP=568;FS=13.658;HRun=0;HaplotypeScore=174.9935;InbreedingCoeff=0.3408;MQ=64.57;MQ0=19;MQRankSum=-3.660;QD=28.78;ReadPosRankSum=1.281;VQSLOD=3.6806;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:24:20.33:166,0,20	0/0:3,0:3:1.82:0,2,5	0/0:96,0:32:35.35:0,35,421	0/0:111,0:31:19.50:0,19,369	1/1:5,5:10:12.04:264,12,0	1/1:5,2:7:15.05:360,15,0	1/1:3,8:11:18.06:512,18,0	0/1:22,0:22:99:151,0,233	1/1:0,19:19:24.08:758,24,0	1/1:3,12:15:39.13:807,39,0	1/1:3,7:10:12.04:282,12,0	1/1:2,4:6:9.03:286,9,0	1/1:3,9:12:27.09:772,27,0	1/1:1,15:16:24.08:756,24,0	1/1:2,16:18:24.08:760,24,0	0/1:13,0:13:73.27:73,0,118	0/0:38,0:38:75.20:0,75,2443	1/1:0,12:12:15.05:458,15,0	0/1:11,0:11:10.90:11,0,346	0/0:7,0:6:6.02:0,6,111	0/1:9,0:9:2.79:3,0,14	1/1:8,5:13:27.08:612,27,0	1/1:4,2:6:6.02:147,6,0	1/1:11,1:12:6.02:115,6,0	1/1:1,9:10:12.04:381,12,0	1/1:2,16:18:45.15:1006,45,0	0/1:21,0:20:87.65:201,0,88	0/1:16,0:16:69.93:70,0,104
chr10	43161108	.	GGAGTA	G	6659.39	PASS	AB=0.980;AC=47;AF=0.839;AN=56;BaseQRankSum=-1.806;DP=565;FS=15.645;HRun=0;HaplotypeScore=151.9292;InbreedingCoeff=0.3279;MQ=68.71;MQ0=19;MQRankSum=-5.022;QD=15.56;ReadPosRankSum=-0.395;VQSLOD=3.7458;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:29:7.48:491,7,0	1/1:4,0:4:8.52:94,9,0	0/0:99,0:34:36.11:0,36,534	0/1:110,0:33:0.73:1,0,312	1/1:8,0:8:12.02:135,12,0	1/1:7,0:7:14.98:170,15,0	1/1:10,0:10:18.03:216,18,0	0/1:18,2:20:50.06:536,0,50	1/1:19,0:19:24.08:314,24,0	1/1:15,0:15:39.13:579,39,0	1/1:8,0:8:11.96:117,12,0	1/1:4,0:4:9.03:119,9,0	1/1:11,0:11:24.96:329,25,0	1/1:15,0:15:24.08:310,24,0	1/1:18,0:18:24.08:314,24,0	0/1:16,0:16:20.04:175,0,20	0/0:37,0:37:63.46:0,63,1563	1/1:12,0:12:15.05:195,15,0	0/1:12,0:12:62.34:182,0,62	1/1:6,1:6:5.03:59,5,0	0/1:8,0:8:13.64:45,0,14	1/1:10,0:10:27.07:333,27,0	1/1:4,0:4:3.01:37,3,0	1/1:11,0:11:8.94:94,9,0	1/1:10,0:10:12.04:158,12,0	1/1:17,0:17:45.11:627,45,0	1/1:20,4:23:23.33:649,23,0	1/1:13,4:17:26.26:382,26,0
chr10	43162253	.	G	GA	9397.98	PASS	AB=0.836;AC=52;AF=0.963;AN=54;BaseQRankSum=0.036;DP=265;FS=31.718;HRun=1;HaplotypeScore=74.2024;InbreedingCoeff=-0.0505;MQ=102.94;MQ0=0;MQRankSum=-7.350;QD=35.46;ReadPosRankSum=2.205;VQSLOD=2.8372;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,10:12:27.08:408,27,0	1/1:0,8:8:21.07:335,21,0	0/1:16,3:19:99:133,0,254	0/1:16,5:21:99:148,0,241	1/1:0,8:8:21.07:323,21,0	1/1:1,7:8:24.08:376,24,0	1/1:2,14:15:33.11:526,33,0	1/1:4,19:21:54.16:823,54,0	1/1:1,7:8:24.08:376,24,0	1/1:2,12:14:36.11:545,36,0	1/1:0,3:3:9.03:138,9,0	1/1:1,6:7:18.06:287,18,0	1/1:0,7:7:21.07:335,21,0	1/1:0,11:11:33.11:526,33,0	1/1:2,8:10:24.08:383,24,0	1/1:2,6:8:21.07:328,21,0	1/1:1,4:5:12.04:179,12,0	1/1:0,2:2:6.02:96,6,0	1/1:2,10:12:36.12:551,36,0	1/1:0,8:8:24.08:379,24,0	1/1:2,7:9:18.06:282,18,0	1/1:2,10:12:24.08:383,24,0	1/1:0,8:8:21.07:333,21,0	1/1:0,6:6:18.06:285,18,0	1/1:0,8:8:24.08:382,24,0	1/1:1,8:9:27.05:398,27,0	1/1:0,3:3:9.03:143,9,0	./.
chr10	43162335	.	TAC	T	581.10	PASS	AB=0.952;AC=36;AF=0.720;AN=50;BaseQRankSum=7.146;DP=395;FS=29.249;HRun=0;HaplotypeScore=148.0450;InbreedingCoeff=0.2629;MQ=55.19;MQ0=25;MQRankSum=-2.803;QD=2.23;ReadPosRankSum=2.080;VQSLOD=1.1673;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:42,7:46:99:110,0,101	0/1:6,1:7:23.42:23,0,78	./.	./.	1/1:11,0:10:1.55:4,2,0	1/1:12,0:10:5.68:28,6,0	1/1:15,0:8:2.84:14,3,0	0/0:34,0:34:7.72:0,8,34	1/1:15,0:13:11.36:56,11,0	1/1:7,0:6:5.68:28,6,0	1/1:2,0:2:2.84:14,3,0	1/1:10,0:9:8.52:42,9,0	1/1:4,0:4:8.52:42,9,0	1/1:12,0:12:11.36:55,11,0	1/1:20,0:20:22.73:111,23,0	0/0:13,0:16:17.99:0,18,153	0/1:26,1:27:5.37:5,0,255	1/1:5,0:4:2.84:14,3,0	0/0:17,0:17:7.98:0,8,47	0/1:17,0:17:0.99:1,0,60	0/0:29,0:29:1.58:0,2,21	1/1:12,0:10:8.52:42,9,0	1/1:1,0:1:2.84:14,3,0	./.	1/1:4,0:3:5.68:28,6,0	1/1:13,0:11:17.04:84,17,0	0/1:10,0:10:5.26:5,0,36	0/1:6,0:5:6.29:10,0,6
chr10	43162440	.	C	CA	28799.71	PASS	AB=0.861;AC=54;AF=0.964;AN=56;BaseQRankSum=-4.323;DP=747;FS=1.494;HRun=0;HaplotypeScore=129.2451;InbreedingCoeff=-0.0295;MQ=58.05;MQ0=0;MQRankSum=-2.484;QD=38.55;ReadPosRankSum=3.920;VQSLOD=4.3255;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,45:44:99:1820,114,0	1/1:2,9:11:30.05:440,30,0	0/1:12,2:14:99:108,0,112	0/1:9,2:9:1.85:132,0,2	1/1:0,31:31:63.21:1003,63,0	1/1:0,20:20:51.17:804,51,0	1/1:2,35:37:96.33:1532,96,0	1/1:1,38:39:99:1749,117,0	1/1:0,25:25:66.22:1033,66,0	1/1:0,28:28:84.29:1341,84,0	1/1:0,17:17:33.11:513,33,0	1/1:0,21:21:51.11:783,51,0	1/1:0,26:26:66.11:1053,66,0	1/1:0,26:26:57.19:898,57,0	1/1:0,28:28:69.23:1090,69,0	1/1:2,24:26:71.69:1120,72,0	1/1:3,29:32:87.27:1363,87,0	1/1:0,19:19:42.14:671,42,0	1/1:1,16:17:45.15:719,45,0	1/1:1,20:21:60.20:958,60,0	1/1:3,65:68:99:2464,156,0	1/1:0,29:29:69:1069,69,0	1/1:3,23:26:54.18:850,54,0	1/1:1,44:44:99:1724,107,0	1/1:0,20:20:48.16:745,48,0	1/1:1,28:29:84.20:1284,84,0	1/1:0,20:20:57.08:909,57,0	1/1:1,15:16:39.13:623,39,0
chr10	43162758	.	A	ACGTCCAGAACC	53490.35	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=-7.840;DP=757;FS=0.000;HRun=0;HaplotypeScore=211.9310;InbreedingCoeff=0.9977;MQ=74.15;MQ0=0;MQRankSum=-20.063;QD=127.06;ReadPosRankSum=-0.794;VQSLOD=4.9099;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,123,4231	0/0:14,0:14:42.14:0,42,1511	0/0:29,0:29:71.42:0,71,2451	0/0:17,0:17:42.09:0,42,1177	1/1:12,18:30:66.23:3142,66,0	1/1:7,13:21:60.21:3317,60,0	1/1:16,10:29:72.25:3229,72,0	0/0:34,0:33:93.30:0,93,3075	1/1:8,14:26:63.22:3260,63,0	1/1:8,16:28:84.26:4141,84,0	1/1:3,6:11:30.10:1426,30,0	1/1:5,17:26:66.23:3524,66,0	1/1:12,21:36:90.31:4776,90,0	1/1:13,20:36:99:5129,102,0	1/1:16,18:37:93.32:5008,93,0	0/0:22,0:22:63.20:0,63,2048	0/0:33,0:33:99:0,99,3381	1/1:9,6:16:39.13:1941,39,0	0/0:25,0:25:69.18:0,69,2171	0/0:27,0:27:78.24:0,78,2545	0/0:35,0:35:99:0,102,3645	1/1:13,23:36:96.33:4884,96,0	1/1:12,15:29:75.26:3263,75,0	1/1:10,9:22:39.60:1753,40,0	1/1:1,5:6:15.05:870,15,0	1/1:5,18:29:78.23:3826,78,0	0/0:28,0:28:84.27:0,84,2885	0/0:25,0:25:75.22:0,75,2595
chr10	43163242	.	G	GTT	2748.92	PASS	AB=0.979;AC=42;AF=0.750;AN=56;BaseQRankSum=4.293;DP=517;FS=16.316;HRun=0;HaplotypeScore=172.6170;InbreedingCoeff=-0.1852;MQ=79.38;MQ0=4;MQRankSum=-1.946;QD=5.42;ReadPosRankSum=8.302;VQSLOD=1.3213;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:42,0:41:40.85:235,41,0	1/1:12,0:12:20.42:74,20,0	0/1:19,2:21:99:157,0,127	0/1:15,2:17:99:141,0,147	0/1:16,0:16:51.05:56,0,51	1/1:15,0:15:24.11:129,24,0	0/1:23,0:23:2.87:176,0,3	1/1:25,0:25:36.54:251,37,0	0/1:18,0:18:4.28:81,0,4	0/1:19,0:18:25.64:74,0,26	0/0:10,0:9:2.62:0,3,78	1/1:23,1:23:17.83:75,18,0	1/1:16,0:16:15.35:48,15,0	1/1:24,0:24:33.49:121,33,0	1/1:14,0:13:9.71:25,10,0	0/1:12,0:12:13.95:19,0,14	1/1:31,0:31:1.37:120,1,0	1/1:22,1:21:11.08:211,11,0	0/1:16,1:16:41.69:296,0,42	0/1:19,0:19:10.54:67,0,11	0/1:21,0:21:2.90:130,0,3	1/1:13,0:13:12.95:40,13,0	1/1:15,0:15:17.14:54,17,0	1/1:17,0:17:29.86:123,30,0	1/1:16,0:15:16.18:51,16,0	0/1:19,0:18:29.92:42,0,30	0/1:14,0:14:35.47:63,0,35	1/1:4,0:4:10.39:40,10,0
chr10	43163246	.	GGT	G	6213.42	PASS	AB=1.000;AC=52;AF=0.929;AN=56;BaseQRankSum=5.986;DP=523;FS=7.990;HRun=0;HaplotypeScore=161.6943;InbreedingCoeff=-0.0817;MQ=78.20;MQ0=4;MQRankSum=-3.578;QD=11.88;ReadPosRankSum=9.480;VQSLOD=3.0747;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:43,0:42:35.91:434,36,0	1/1:12,0:12:31.24:168,31,0	0/1:21,0:21:45.58:46,0,152	0/1:17,0:17:61.45:61,0,90	1/1:17,0:17:17.50:178,17,0	1/1:16,0:16:43.29:250,43,0	1/1:23,0:23:20.34:280,20,0	0/1:27,0:27:1.81:231,0,2	1/1:16,1:17:49.09:298,49,0	1/1:17,1:17:41.67:219,42,0	1/1:7,2:8:20.67:174,21,0	1/1:25,0:24:58.19:363,58,0	1/1:16,0:16:40.83:250,41,0	1/1:24,0:24:63.29:363,63,0	1/1:14,0:13:32.58:221,33,0	1/1:12,0:12:17.29:189,17,0	1/1:30,0:30:26.54:297,27,0	1/1:25,0:23:14:202,14,0	1/1:16,0:15:14.81:132,15,0	1/1:17,1:18:49.16:303,49,0	0/1:27,0:27:89.34:133,0,89	1/1:13,0:13:35.02:218,35,0	1/1:15,0:15:43.66:259,44,0	1/1:19,0:19:1.22:169,1,0	1/1:15,0:14:40.76:243,41,0	1/1:18,0:17:43.33:263,43,0	1/1:12,0:12:34.90:215,35,0	1/1:4,0:4:11.28:55,11,0
chr10	43163384	.	TG	T	8656.24	PASS	AC=54;AF=1.000;AN=54;DP=280;FS=0.000;HRun=3;HaplotypeScore=53.1481;InbreedingCoeff=-0.0154;MQ=45.17;MQ0=0;QD=31.03;VQSLOD=4.2529;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,20:21:48.02:555,48,0	1/1:0,4:4:12.04:148,12,0	1/1:1,1:2:3.01:37,3,0	./.	1/1:0,11:11:33.10:408,33,0	1/1:1,8:9:24.07:297,24,0	1/1:0,14:14:39.12:482,39,0	1/1:0,16:16:48.15:594,48,0	1/1:3,8:11:21:240,21,0	1/1:0,6:6:18.06:223,18,0	1/1:1,2:3:6.02:74,6,0	1/1:1,18:19:54.17:667,54,0	1/1:0,13:13:33.10:408,33,0	1/1:1,11:12:30.57:371,31,0	1/1:0,8:8:21.01:241,21,0	1/1:0,9:9:27.08:333,27,0	1/1:1,16:17:30.09:370,30,0	1/1:1,7:8:21.06:248,21,0	1/1:0,6:6:18.06:223,18,0	1/1:1,16:17:45.07:537,45,0	1/1:1,15:16:42.06:497,42,0	1/1:0,7:7:18.06:223,18,0	1/1:0,9:9:27.08:333,27,0	1/1:2,11:13:18.01:222,18,0	1/1:0,10:10:24.08:297,24,0	1/1:1,9:10:27.08:332,27,0	1/1:0,5:5:15.05:186,15,0	1/1:0,3:3:9.03:111,9,0
chr10	43165724	.	AC	A	4222.61	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=4.836;DP=437;FS=5.768;HRun=3;HaplotypeScore=53.3602;InbreedingCoeff=0.9777;MQ=79.91;MQ0=2;MQRankSum=-0.699;QD=30.82;ReadPosRankSum=1.476;VQSLOD=4.5997;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,36:37:93.29:1151,93,0	1/1:0,10:10:24.08:297,24,0	0/0:20,0:19:44.70:0,45,630	0/0:15,0:15:36.93:0,37,398	0/0:24,0:24:39.15:0,39,695	0/0:18,0:18:51.17:0,51,732	0/0:20,0:19:57.18:0,57,801	1/1:2,14:16:42.12:511,42,0	0/0:14,0:14:39.13:0,39,553	0/0:18,0:17:45.11:0,45,619	0/0:12,0:12:33.11:0,33,462	0/0:11,0:11:33.11:0,33,471	0/0:12,0:12:30.10:0,30,431	0/0:12,0:12:30.10:0,30,421	0/0:11,0:11:33.11:0,33,474	1/1:1,3:4:6.02:74,6,0	0/0:18,0:18:51.14:0,51,697	0/0:9,0:9:27.07:0,27,368	1/1:2,11:13:33.10:407,33,0	1/1:0,15:15:45.14:557,45,0	1/1:1,15:16:45.14:557,45,0	0/0:17,0:17:45.14:0,45,627	0/0:14,0:14:42.03:0,42,575	0/0:13,0:13:30.08:0,30,412	0/0:19,0:19:57.19:0,57,814	0/0:23,0:22:63.21:0,63,899	1/1:0,18:18:42.13:520,42,0	1/1:0,8:8:12.04:148,12,0
chr10	43166756	.	CAA	C	1704.06	PASS	AB=0.794;AC=21;AF=0.375;AN=56;BaseQRankSum=7.014;DP=538;FS=2.696;HRun=16;HaplotypeScore=110.9780;InbreedingCoeff=0.6536;MQ=64.37;MQ0=0;MQRankSum=1.927;QD=8.44;ReadPosRankSum=5.933;VQSLOD=1.3796;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:6,2:24:14.13:0,14,116	0/1:3,1:9:12.61:13,0,21	0/1:16,0:9:1.37:1,0,50	0/0:17,0:12:17.78:0,18,172	0/0:22,0:25:33.29:0,33,279	1/1:4,21:29:61.09:479,61,0	1/1:8,10:21:22.73:223,23,0	0/0:20,0:25:54.07:0,54,610	1/1:10,9:20:14.71:167,15,0	0/0:22,0:22:22.72:0,23,145	0/0:7,0:15:29.85:0,30,239	1/1:0,4:5:14.73:112,15,0	0/1:11,3:14:29.05:82,0,29	1/1:4,2:8:2.56:53,3,0	0/0:13,0:14:26.76:0,27,190	1/1:4,0:18:35.61:153,36,0	0/0:31,0:34:82.81:0,83,881	0/0:8,0:11:14.96:0,15,123	0/0:20,1:23:19.42:0,19,406	0/0:11,0:16:31.79:0,32,319	0/1:12,1:13:2.26:2,0,217	1/1:3,9:13:29.59:237,30,0	1/1:8,14:23:37.50:298,37,0	0/1:5,6:13:5.49:81,0,5	0/0:20,0:24:41.52:0,42,315	0/0:17,0:24:41.84:0,42,392	0/0:28,0:36:62.93:0,63,654	0/0:18,0:23:50.46:0,50,569
chr10	43168122	.	GAC	G	173.13	PASS	AB=0.802;AC=2;AF=0.036;AN=56;BaseQRankSum=6.762;DP=723;FS=0.995;HRun=0;HaplotypeScore=104.9971;InbreedingCoeff=-0.0374;MQ=88.60;MQ0=0;MQRankSum=6.671;QD=2.62;ReadPosRankSum=-2.628;VQSLOD=1.6525;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,129,2432	0/0:9,0:9:27.09:0,27,521	0/1:18,10:28:99:187,0,903	0/1:31,6:37:74.92:75,0,1258	0/0:20,0:20:57.17:0,57,1056	0/0:11,0:11:30.10:0,30,579	0/0:40,0:40:99:0,117,2179	0/0:25,0:25:75.24:0,75,1405	0/0:35,0:35:99:0,102,1968	0/0:25,0:25:69.23:0,69,1301	0/0:14,0:14:39.13:0,39,753	0/0:25,0:25:75.26:0,75,1448	0/0:26,0:26:78.27:0,78,1497	0/0:17,0:17:51.17:0,51,974	0/0:26,0:26:78.27:0,78,1505	0/0:34,0:34:99:0,99,1907	0/0:39,0:39:99:0,117,2230	0/0:28,0:28:84.29:0,84,1623	0/0:26,0:26:75.26:0,75,1423	0/0:20,0:20:57.20:0,57,1079	0/0:51,0:51:99:0,148,2816	0/0:22,0:22:60.21:0,60,1150	0/0:19,0:19:57.15:0,57,1042	0/0:33,0:33:99:0,99,1896	0/0:16,0:16:48.16:0,48,909	0/0:20,0:20:54.19:0,54,1033	0/0:27,0:26:81.28:0,81,1554	0/0:6,0:6:18.06:0,18,335
chr10	43169077	.	A	ACAC	332.97	PASS	AB=0.784;AC=17;AF=0.304;AN=56;BaseQRankSum=6.636;DP=289;FS=9.639;HRun=0;HaplotypeScore=69.2121;InbreedingCoeff=-0.3110;MQ=77.63;MQ0=7;MQRankSum=-2.859;QD=2.48;ReadPosRankSum=2.714;VQSLOD=0.5251;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:32:59.73:0,60,703	0/0:3,0:5:15.01:0,15,169	0/0:31,0:19:53.44:0,53,664	0/0:30,0:22:60.18:0,60,824	0/0:5,0:6:6.36:0,6,130	0/1:2,0:3:18.39:18,0,70	0/1:12,0:17:99:118,0,206	0/0:8,0:10:12.67:0,13,227	1/1:1,0:1:3:29,3,0	0/1:8,1:12:99:109,0,203	0/0:4,0:4:2.98:0,3,39	0/1:6,0:6:2.95:3,0,123	0/1:5,0:6:16.40:16,0,106	0/1:1,0:2:33.31:36,0,33	0/1:4,0:6:41.36:41,0,49	0/0:4,0:11:33.10:0,33,400	0/0:13,0:13:36.12:0,36,621	0/1:2,0:3:18.15:18,0,70	0/1:9,0:11:22.84:23,0,249	0/1:1,0:6:7.79:8,0,30	0/1:8,0:16:10.21:10,0,268	0/0:4,0:4:2.98:0,3,39	0/1:8,0:7:0.82:1,0,35	0/1:13,0:15:35.06:35,0,231	0/0:2,0:2:2.98:0,3,39	0/1:7,0:7:7.93:8,0,214	0/1:5,0:12:3.09:3,0,169	0/0:3,0:6:3.63:0,4,109
chr10	43169128	.	GAC	G	103.44	PASS	AB=0.944;AC=14;AF=0.318;AN=44;BaseQRankSum=2.779;DP=167;FS=0.000;HRun=0;HaplotypeScore=38.0311;InbreedingCoeff=0.2671;MQ=77.83;MQ0=10;MQRankSum=-4.132;QD=2.87;ReadPosRankSum=-1.871;VQSLOD=0.6511;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:54.05:0,54,929	0/0:4,0:4:12.04:0,12,208	0/0:14,0:10:25.73:0,26,401	0/0:25,0:13:9.60:0,10,295	./.	./.	1/1:2,1:3:0.47:1,0,0	0/0:11,0:10:30.10:0,30,494	1/1:1,0:1:2.97:20,3,0	0/1:4,0:3:15.10:28,0,15	./.	1/1:3,0:2:2.99:23,3,0	0/0:3,0:3:2.88:0,3,20	./.	0/0:3,0:3:4.76:0,5,23	0/0:9,0:9:16.05:0,16,327	0/0:9,0:9:27.07:0,27,398	1/1:4,1:5:3.31:45,3,0	0/0:6,0:6:17.95:0,18,282	0/0:2,0:2:6.02:0,6,104	0/0:6,0:5:9.03:0,9,170	./.	./.	1/1:4,0:3:2.80:13,3,0	0/0:2,0:2:2.92:0,3,17	0/1:5,0:5:5.58:27,0,6	0/1:5,2:7:55.65:56,0,220	0/1:4,0:4:19.92:20,0,133
chr10	43169129	.	AC	A	190.17	PASS	AB=1.000;AC=18;AF=0.429;AN=42;BaseQRankSum=3.931;DP=162;FS=0.000;HRun=1;HaplotypeScore=33.7338;InbreedingCoeff=0.5938;MQ=78.75;MQ0=10;MQRankSum=-5.023;QD=5.00;ReadPosRankSum=-2.038;VQSLOD=-0.3579;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:51.92:0,52,782	0/0:4,0:4:12.04:0,12,189	0/0:14,0:10:27.05:0,27,337	0/0:26,0:13:21.58:0,22,236	./.	./.	1/1:2,1:3:2.97:20,3,0	0/0:11,0:10:30.02:0,30,380	0/0:1,0:1:0.89:0,1,2	1/1:1,2:2:6:52,6,0	./.	1/1:3,0:2:2.60:10,3,0	./.	./.	1/1:0,0:3:5.88:36,6,0	0/0:9,0:9:17.87:0,18,276	0/0:8,0:8:23.94:0,24,269	1/1:3,0:5:10.80:56,11,0	0/0:6,0:6:17.99:0,18,243	0/0:2,0:2:6.02:0,6,94	0/0:6,0:5:9.03:0,9,144	./.	./.	1/1:3,0:2:2.84:14,3,0	1/1:1,1:2:2.96:19,3,0	1/1:0,5:5:12.02:122,12,0	0/1:7,0:7:7.75:8,0,166	0/1:4,0:4:1.98:2,0,120
chr10	43169887	.	GGTGTGTGTGTGTGTGTGTGTGTGTGT	G	6063.74	PASS	AB=0.780;AC=17;AF=0.304;AN=56;BaseQRankSum=6.160;DP=568;FS=22.321;HRun=0;HaplotypeScore=301.2179;InbreedingCoeff=0.7043;MQ=64.94;MQ0=10;MQRankSum=-6.782;QD=34.45;ReadPosRankSum=1.792;VQSLOD=2.4248;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:36:30.10:0,30,1729	0/0:7,0:7:9.03:0,9,563	0/0:30,0:22:7.17:0,7,67	0/0:30,0:23:21.06:0,21,413	0/1:10,10:20:2.49:204,0,2	1/1:3,6:9:12.04:789,12,0	0/1:18,0:18:99:155,0,216	0/0:16,0:16:15.05:0,15,453	1/1:5,11:16:15.25:699,15,0	0/0:22,0:21:30.10:0,30,1600	0/0:8,0:7:6.02:0,6,646	1/1:7,18:25:20.65:1272,21,0	1/1:5,10:15:23.67:1410,24,0	1/1:7,13:21:15.05:991,15,0	0/0:16,0:16:24.08:0,24,1930	0/0:12,0:20:21.04:0,21,1406	0/0:21,0:24:27.08:0,27,1281	0/0:20,0:19:36.05:0,36,2301	0/0:18,0:24:33.11:0,33,2058	0/0:12,0:11:12.04:0,12,817	0/0:43,0:56:33.11:0,33,1650	1/1:5,0:6:5.98:47,6,0	1/1:5,10:15:9.03:485,9,0	0/1:16,15:31:4.30:13,0,4	0/0:15,0:15:6.60:0,7,109	0/0:21,0:19:21.07:0,21,1681	0/0:9,0:13:12.87:0,13,634	0/0:16,0:16:27.09:0,27,1893
chr10	43169937	.	T	TGTGTGC	1154.58	PASS	AB=1.000;AC=15;AF=0.278;AN=54;BaseQRankSum=1.575;DP=536;FS=5.778;HRun=0;HaplotypeScore=167.0328;InbreedingCoeff=0.2914;MQ=60.15;MQ0=16;MQRankSum=0.868;QD=6.38;ReadPosRankSum=-1.107;VQSLOD=1.8871;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:31,0:30:45.91:420,46,0	1/1:0,7:7:2.95:108,3,0	0/0:21,0:12:27.30:0,27,292	0/0:28,0:21:56.72:0,57,524	0/0:15,0:15:14.99:0,15,149	0/0:15,0:15:19.95:0,20,161	0/0:15,0:15:9.48:0,9,176	0/0:17,0:17:46.85:0,47,399	0/0:21,0:21:27.11:0,27,274	1/1:18,0:17:42.19:246,42,0	0/1:13,0:12:44.83:50,0,45	0/0:27,0:27:34.25:0,34,403	0/0:21,0:21:37.80:0,38,452	0/0:25,0:24:32.99:0,33,400	0/0:13,0:13:12.46:0,12,123	0/1:18,0:18:55.15:122,0,55	0/1:24,0:21:9.34:9,0,270	0/1:21,0:21:32.24:32,0,82	0/1:17,0:16:55.23:55,0,141	0/0:15,0:14:15.85:0,16,150	0/0:47,0:44:32.65:0,33,458	0/0:7,0:7:8.98:0,9,73	0/0:17,0:17:20.89:0,21,207	0/0:37,0:36:29.64:0,30,232	./.	0/1:19,0:17:40.84:143,0,41	0/1:8,0:7:17.72:18,0,79	1/1:5,0:5:11.99:122,12,0
chr10	43169941	.	T	TGC	2051.76	PASS	AC=14;AF=0.259;AN=54;BaseQRankSum=-1.406;DP=546;FS=5.425;HRun=0;HaplotypeScore=137.4625;InbreedingCoeff=0.9051;MQ=63.36;MQ0=12;MQRankSum=2.007;QD=20.31;ReadPosRankSum=-0.990;VQSLOD=3.8224;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:27:50.27:0,50,446	1/1:7,0:7:6.65:22,7,0	0/0:24,0:15:30.57:0,31,459	0/0:27,0:21:59.47:0,59,747	0/0:14,0:14:18.06:0,18,232	0/0:17,0:17:29.06:0,29,305	0/0:17,0:17:30.08:0,30,381	0/0:19,0:19:48.12:0,48,608	0/0:22,0:22:28.68:0,29,387	1/1:4,17:20:54.13:848,54,0	1/1:9,3:11:21.07:337,21,0	0/0:27,0:27:37.29:0,37,424	0/0:24,0:24:42.12:0,42,520	0/0:25,0:24:42.12:0,42,519	1/1:3,11:14:5.63:99,6,0	0/0:17,0:17:37.99:0,38,330	0/0:24,0:22:36:0,36,460	1/1:3,20:24:20.80:276,21,0	0/0:15,0:15:23.56:0,24,276	0/0:14,0:13:18.04:0,18,231	0/0:44,0:42:62.92:0,63,793	0/0:8,0:8:9.03:0,9,120	0/0:16,0:16:21.07:0,21,271	0/0:41,0:40:42.09:0,42,534	./.	1/1:5,12:15:38.96:593,39,0	0/0:5,0:5:7.66:0,8,153	1/1:6,0:6:4.70:60,5,0
chr10	43170211	.	T	TA	3227.04	PASS	AB=0.624;AC=25;AF=0.446;AN=56;BaseQRankSum=-3.089;DP=546;FS=3.596;HRun=13;HaplotypeScore=102.0125;InbreedingCoeff=0.4263;MQ=72.86;MQ0=0;MQRankSum=0.957;QD=10.83;ReadPosRankSum=-0.647;VQSLOD=3.0778;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:50:93.40:0,93,747	0/0:12,0:12:22.91:0,23,163	0/0:15,0:13:11.67:0,12,77	0/0:13,0:12:11.71:0,12,70	1/1:10,18:29:30.37:406,30,0	1/1:8,7:17:18.01:163,18,0	1/1:11,11:22:21:188,21,0	1/1:7,19:27:30.04:429,30,0	0/1:6,11:17:9.18:190,0,9	0/0:24,0:26:48.60:0,49,320	0/0:16,0:17:34.61:0,35,226	1/1:4,12:16:3.40:166,3,0	0/1:8,18:26:17.96:265,0,18	1/1:4,9:13:18.02:167,18,0	0/0:19,1:22:11.79:0,12,206	0/0:8,0:9:22.85:0,23,150	0/0:27,0:29:61.38:0,61,413	0/0:24,3:27:6.75:0,7,335	0/1:13,12:26:43.52:231,0,44	0/1:5,8:13:31.70:165,0,32	0/1:3,8:12:17.30:130,0,17	1/1:2,13:16:29.07:281,29,0	1/1:13,11:24:12.85:248,13,0	1/1:4,10:15:3.28:161,3,0	0/0:9,0:9:20.82:0,21,144	0/0:19,0:19:26.61:0,27,182	0/1:7,10:17:14.76:143,0,15	0/1:4,4:8:23.14:94,0,23
chr10	43170926	.	CAATA	C	1842.24	PASS	AC=20;AF=0.455;AN=44;BaseQRankSum=3.807;DP=300;FS=2.750;HRun=0;HaplotypeScore=48.8767;InbreedingCoeff=0.7307;MQ=80.84;MQ0=2;MQRankSum=-0.449;QD=13.85;ReadPosRankSum=-1.975;VQSLOD=2.7041;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:36.12:0,36,852	0/0:3,0:3:6.02:0,6,142	./.	./.	0/0:8,0:8:6:0,6,93	1/1:8,7:15:15.05:236,15,0	1/1:1,2:3:3.01:47,3,0	1/1:19,9:28:27.07:375,27,0	1/1:7,2:10:15.04:216,15,0	0/0:8,0:10:6.02:0,6,105	0/0:4,0:5:3.01:0,3,52	0/0:5,0:5:6.02:0,6,142	./.	0/0:5,0:5:6.02:0,6,142	./.	1/1:3,3:6:9.03:141,9,0	0/0:26,0:26:57.17:0,57,1257	0/0:2,0:8:15.02:0,15,231	1/1:12,4:17:15.04:217,15,0	1/1:8,5:13:15.05:236,15,0	1/1:5,0:5:3:25,3,0	./.	0/0:5,0:5:3.01:0,3,71	./.	0/0:11,0:16:9.03:0,9,153	0/0:5,0:7:6.02:0,6,118	1/1:9,9:17:17.95:283,18,0	1/1:13,5:18:15.05:236,15,0
chr10	43171145	.	CACA	C	5821.71	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=8.538;DP=497;FS=8.670;HRun=0;HaplotypeScore=77.8435;InbreedingCoeff=0.9889;MQ=81.57;MQ0=0;MQRankSum=-1.764;QD=36.85;ReadPosRankSum=3.715;VQSLOD=5.2475;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,99,2086	0/0:4,0:4:12.04:0,12,268	0/0:24,0:26:50.56:0,51,1247	0/0:25,0:20:43.37:0,43,775	1/1:0,8:7:20.97:283,21,0	1/1:1,34:35:84.29:1371,84,0	1/1:2,13:15:24.08:391,24,0	0/0:23,0:23:66.21:0,66,1382	1/1:0,11:11:27.09:441,27,0	0/0:12,0:12:36.12:0,36,793	0/0:5,0:5:12.04:0,12,265	1/1:1,13:14:30.05:460,30,0	1/1:0,12:12:27.09:440,27,0	1/1:2,18:20:48.12:754,48,0	0/0:14,0:14:42.13:0,42,856	0/0:13,0:13:39.13:0,39,850	0/0:29,0:29:72.21:0,72,1483	0/0:19,0:19:57.20:0,57,1265	0/0:20,0:20:51.16:0,51,1038	0/0:11,0:11:33.11:0,33,700	0/0:26,0:26:72.22:0,72,1524	1/1:1,9:10:27.04:410,27,0	1/1:1,7:8:24.08:391,24,0	1/1:1,24:25:54.18:881,54,0	0/0:11,0:11:27.09:0,27,588	0/0:22,0:22:63.21:0,63,1369	0/0:21,0:21:60.15:0,60,1194	0/0:23,0:23:63.22:0,63,1406
chr10	43171431	.	TTG	T	309.30	PASS	AB=0.951;AC=15;AF=0.326;AN=46;BaseQRankSum=2.223;DP=642;FS=6.158;HRun=0;HaplotypeScore=90.0625;InbreedingCoeff=0.2267;MQ=67.86;MQ0=16;MQRankSum=0.304;QD=1.03;ReadPosRankSum=-1.486;VQSLOD=1.0895;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:33:5.68:28,6,0	./.	./.	./.	0/0:8,0:8:2.99:0,3,24	1/1:12,4:16:9.02:97,9,0	1/1:26,3:32:2.86:110,3,0	./.	1/1:22,4:26:6.01:64,6,0	0/0:19,0:21:22.55:0,23,207	0/0:11,0:11:0.47:0,0,2	0/0:20,2:22:9.03:0,9,127	0/1:17,1:19:50.18:50,0,150	1/1:17,3:20:3:32,3,0	0/0:12,0:13:5.97:0,6,48	0/0:14,0:15:15.01:0,15,174	0/1:52,0:53:10.87:11,0,329	0/0:11,0:12:19.50:0,19,179	0/1:20,0:20:22.40:22,0,47	0/1:16,1:16:26.13:26,0,38	0/1:56,5:59:11.04:11,0,213	0/0:15,0:15:3.01:0,3,44	0/0:10,0:10:3.01:0,3,44	0/0:37,0:36:27.01:0,27,332	0/0:24,0:23:13.55:0,14,140	0/0:24,0:22:27.01:0,27,273	0/0:15,0:15:2.99:0,3,23	./.
chr10	43171905	.	A	AGG	1579.11	PASS	AB=0.897;AC=20;AF=0.357;AN=56;BaseQRankSum=5.905;DP=503;FS=10.371;HRun=0;HaplotypeScore=112.8223;InbreedingCoeff=0.7057;MQ=91.36;MQ0=1;MQRankSum=-1.636;QD=9.40;ReadPosRankSum=0.814;VQSLOD=2.8349;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:8.22:0,8,358	0/1:6,0:6:0.81:20,0,1	0/0:39,0:36:81.14:0,81,1031	0/0:30,0:25:47.60:0,48,621	1/1:7,4:12:8.86:114,9,0	1/1:10,8:20:25.45:450,25,0	0/1:11,0:11:37.18:48,0,37	0/0:19,0:19:49.92:0,50,490	1/1:3,9:13:17.93:302,18,0	0/0:19,0:19:26.80:0,27,293	0/0:13,0:13:35.41:0,35,235	1/1:5,0:13:13.26:182,13,0	1/1:0,0:10:26.37:158,26,0	1/1:4,0:15:24.37:145,24,0	0/0:13,0:12:10.98:0,11,190	0/1:20,0:20:6.97:7,0,122	0/0:21,0:21:60.20:0,60,979	0/0:17,0:16:42.56:0,43,276	0/0:17,0:17:48.16:0,48,769	0/0:19,0:19:54.14:0,54,825	0/0:25,0:25:75.24:0,75,1175	1/1:3,0:16:15.30:111,15,0	0/1:5,0:17:17.95:76,0,18	1/1:1,0:15:16.12:168,16,0	0/0:14,0:14:39.49:0,39,267	0/0:16,0:16:45.25:0,45,294	0/0:26,0:25:78.22:0,78,1200	0/0:14,0:14:42.14:0,42,679
chr10	43171906	.	A	AGG	3970.51	PASS	AB=0.944;AC=27;AF=0.482;AN=56;BaseQRankSum=3.057;DP=503;FS=7.260;HRun=8;HaplotypeScore=103.7563;InbreedingCoeff=0.8808;MQ=91.16;MQ0=1;MQRankSum=0.098;QD=18.05;ReadPosRankSum=-2.313;VQSLOD=1.3200;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:35:39.54:382,40,0	1/1:0,6:6:12.03:171,12,0	0/0:40,0:36:42.90:0,43,540	0/0:29,0:24:37.92:0,38,383	1/1:11,1:13:15.03:202,15,0	1/1:18,0:18:39.13:575,39,0	1/1:3,7:11:6.02:70,6,0	1/1:5,0:20:27.08:89,27,0	1/1:11,1:12:27.08:404,27,0	0/0:19,0:19:22.22:0,22,212	0/0:13,0:13:9.17:0,9,186	1/1:13,1:14:11.83:298,12,0	1/1:11,0:11:27.04:258,27,0	1/1:11,2:13:27.03:279,27,0	0/0:12,0:11:6.01:0,6,172	1/1:2,15:20:34.89:487,35,0	0/0:21,0:21:63.15:0,63,691	0/0:17,0:16:40.76:0,41,264	0/0:17,0:17:42.08:0,42,452	0/0:19,0:19:42.10:0,42,467	0/0:25,0:25:69.18:0,69,764	1/1:16,0:16:30.03:284,30,0	0/1:16,1:17:13.92:182,0,14	1/1:14,0:14:17.62:291,18,0	0/0:14,0:14:18.70:0,19,220	0/0:16,0:16:34.97:0,35,243	0/0:27,0:27:66.15:0,66,734	0/0:14,0:14:36.08:0,36,401
chr10	43172569	.	GGGA	G	10097.43	PASS	AB=1.000;AC=39;AF=0.696;AN=56;BaseQRankSum=9.231;DP=500;FS=72.821;HRun=0;HaplotypeScore=97.8653;InbreedingCoeff=0.8979;MQ=60.77;MQ0=0;MQRankSum=-0.281;QD=25.12;ReadPosRankSum=11.281;VQSLOD=1.4399;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:19:38.60:293,39,0	1/1:10,0:10:14.87:109,15,0	0/0:18,0:15:29.06:0,29,433	0/1:19,0:13:17.69:18,0,179	1/1:3,17:20:50.92:612,51,0	1/1:2,17:19:30.10:430,30,0	1/1:1,29:30:51.17:731,51,0	0/0:19,0:19:35.93:0,36,355	1/1:2,21:23:48.11:664,48,0	1/1:5,17:22:44.75:528,45,0	1/1:2,14:15:30.10:430,30,0	1/1:2,15:17:39.01:541,39,0	1/1:0,26:26:54.14:751,54,0	1/1:4,20:24:51.04:730,51,0	1/1:1,15:16:27.09:387,27,0	1/1:15,0:15:35.34:256,35,0	0/0:13,0:13:30.07:0,30,459	1/1:4,23:27:39.13:558,39,0	0/0:12,0:12:30.06:0,30,399	0/0:5,0:5:9.03:0,9,125	0/0:10,0:10:20.99:0,21,261	1/1:1,16:17:36.12:516,36,0	1/1:4,7:11:27.08:370,27,0	1/1:2,31:33:63.01:903,63,0	1/1:1,22:23:51.17:731,51,0	1/1:2,13:15:42.04:538,42,0	0/0:15,0:15:33.50:0,34,423	0/0:6,0:6:11.98:0,12,130
chr10	43172570	.	GGA	G	5945.66	PASS	AB=1.000;AC=37;AF=0.661;AN=56;BaseQRankSum=11.013;DP=498;FS=75.851;HRun=0;HaplotypeScore=103.1795;InbreedingCoeff=0.7665;MQ=60.82;MQ0=0;MQRankSum=1.254;QD=14.98;ReadPosRankSum=12.234;VQSLOD=0.9085;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,18:19:39.07:489,39,0	1/1:0,10:10:14.99:175,15,0	0/0:18,0:15:28.91:0,29,388	0/1:19,0:13:8.40:8,0,112	1/1:20,0:20:14.27:307,14,0	0/1:19,0:19:5.10:189,0,5	1/1:30,0:30:34.91:364,35,0	0/0:20,0:20:38.86:0,39,335	1/1:23,0:23:30.43:335,30,0	0/1:22,0:22:29.25:251,0,29	1/1:15,0:14:29.84:225,30,0	1/1:16,0:16:38.67:295,39,0	1/1:26,0:26:53.71:402,54,0	1/1:24,0:24:17.04:342,17,0	1/1:16,0:16:26.87:202,27,0	1/1:2,13:15:41.92:500,42,0	0/0:14,0:14:33.06:0,33,401	1/1:25,0:25:38.80:291,39,0	0/0:12,0:12:36:0,36,386	0/0:5,0:5:9:0,9,87	0/0:11,0:11:23.94:0,24,236	1/1:17,0:17:35.81:269,36,0	1/1:10,0:10:20.69:191,21,0	1/1:33,0:33:45.22:452,45,0	1/1:23,0:23:35.25:364,35,0	1/1:15,0:15:25.01:293,25,0	0/0:15,0:15:35.52:0,36,365	0/0:6,0:6:11.98:0,12,118
chr10	43175006	.	AG	A	2044.28	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-4.010;DP=538;FS=5.030;HRun=3;HaplotypeScore=103.7070;InbreedingCoeff=0.9928;MQ=79.08;MQ0=0;MQRankSum=-2.837;QD=16.22;ReadPosRankSum=-1.118;VQSLOD=2.8825;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:81.35:0,81,507	0/0:16,0:16:33.01:0,33,192	0/0:20,0:19:43.82:0,44,491	0/0:16,0:15:31.91:0,32,335	0/0:19,0:19:46:0,46,268	0/0:13,0:13:33.95:0,34,207	0/0:18,0:18:44.34:0,44,296	1/1:21,1:22:53.74:431,54,0	0/0:24,0:24:55.95:0,56,347	0/0:16,0:16:16.42:0,16,205	0/0:8,0:8:14.95:0,15,169	0/0:23,0:23:51.73:0,52,311	0/0:22,0:22:52.27:0,52,297	0/0:19,0:19:38.34:0,38,232	0/0:21,0:21:38.24:0,38,274	0/0:16,0:16:47.02:0,47,299	0/0:18,0:18:54.13:0,54,702	0/0:18,0:18:53.53:0,54,452	1/1:16,0:16:41.73:311,42,0	1/1:17,0:16:29.78:216,30,0	1/1:36,0:38:96.92:702,97,0	0/0:19,0:19:33.87:0,34,209	0/0:13,0:13:21.95:0,22,155	0/0:22,0:22:56.07:0,56,359	0/0:12,2:14:23.12:0,23,271	0/0:18,1:19:44.99:0,45,354	1/1:20,0:20:44.35:331,44,0	1/1:13,0:13:32.78:241,33,0
chr10	43175008	.	GGC	G	5884.37	PASS	AB=1.000;AC=27;AF=0.482;AN=56;BaseQRankSum=2.696;DP=532;FS=38.424;HRun=0;HaplotypeScore=99.2027;InbreedingCoeff=0.2405;MQ=80.31;MQ0=0;MQRankSum=-1.981;QD=15.32;ReadPosRankSum=8.478;VQSLOD=2.6749;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:37,0:37:48.08:192,0,48	1/1:15,0:15:15.63:173,16,0	0/0:20,0:19:53.90:0,54,690	0/0:18,0:17:38.72:0,39,454	0/1:19,0:19:27.15:97,0,27	1/1:15,0:15:4.09:79,4,0	0/1:18,0:18:52.01:52,0,63	1/1:12,9:21:55.51:653,56,0	0/1:24,0:24:0.44:96,0,0	0/0:14,0:14:23.78:0,24,245	0/0:9,0:9:14.95:0,15,209	0/1:22,0:22:7.58:113,0,8	0/1:23,0:23:16.50:162,0,16	0/1:19,0:19:14.22:94,0,14	0/0:20,0:20:24:0,24,122	0/1:16,0:16:13.44:79,0,13	0/0:18,0:18:54.16:0,54,972	0/0:18,0:18:53.47:0,53,475	1/1:0,15:15:41.96:521,42,0	1/1:4,13:16:32.78:487,33,0	1/1:2,34:37:98.92:1538,99,0	0/1:21,0:21:59.50:136,0,59	0/1:11,0:11:51.37:52,0,51	0/1:22,0:22:27.04:85,0,27	0/0:13,0:13:19.85:0,20,324	0/0:18,0:18:44.19:0,44,380	1/1:0,19:19:48.02:747,48,0	1/1:0,13:13:33.11:527,33,0
chr10	43175009	.	GCC	G	8265.50	PASS	AB=0.982;AC=44;AF=0.786;AN=56;BaseQRankSum=2.832;DP=529;FS=52.298;HRun=10;HaplotypeScore=92.7520;InbreedingCoeff=0.5476;MQ=78.33;MQ0=0;MQRankSum=-2.967;QD=17.74;ReadPosRankSum=7.731;VQSLOD=-0.7330;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,32:37:75.19:835,75,0	1/1:0,14:14:42.11:467,42,0	0/0:16,0:16:35.57:0,36,444	0/0:18,0:18:26.52:0,27,308	1/1:2,17:19:38.74:434,39,0	1/1:1,14:15:33.09:368,33,0	1/1:4,14:18:33.08:368,33,0	1/1:20,0:20:12.77:173,13,0	1/1:2,22:24:51.13:569,51,0	0/1:15,0:15:24.92:25,0,26	0/0:9,0:9:7.32:0,7,105	1/1:2,20:22:48.12:535,48,0	1/1:3,20:23:51.13:568,51,0	1/1:2,17:19:36.08:401,36,0	1/1:20,0:20:30.24:169,30,0	1/1:2,14:16:42.11:468,42,0	0/0:18,0:18:51.12:0,51,713	0/1:18,0:18:13.47:13,0,62	1/1:15,0:15:0.20:143,0,0	1/1:16,0:15:17.87:232,18,0	1/1:37,0:37:95.54:719,96,0	1/1:4,17:21:33.08:367,33,0	1/1:3,8:11:18.04:200,18,0	1/1:3,19:22:48.12:535,48,0	0/1:12,0:13:5.84:6,0,151	0/1:19,0:19:14.48:14,0,68	1/1:19,0:19:47.57:379,48,0	1/1:13,0:13:32.93:276,33,0
chr10	43175016	.	CCCCT	C	550.93	PASS	AB=0.942;AC=5;AF=0.089;AN=56;BaseQRankSum=0.642;DP=544;FS=1.122;HRun=0;HaplotypeScore=141.3160;InbreedingCoeff=0.3104;MQ=79.38;MQ0=0;MQRankSum=-0.504;QD=7.87;ReadPosRankSum=-0.782;VQSLOD=2.7103;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:82.77:0,83,574	0/0:15,0:15:37.82:0,38,284	0/0:19,0:18:41.27:0,41,783	0/0:18,0:17:41.95:0,42,623	0/0:21,0:21:50.47:0,50,408	0/0:17,0:17:41.53:0,42,332	0/0:17,0:17:38.53:0,39,292	0/0:19,0:19:6.69:0,7,290	0/0:24,0:24:59.24:0,59,405	1/1:17,2:19:38.56:277,39,0	0/0:8,0:8:0.20:0,0,80	0/0:22,0:22:50.31:0,50,362	0/0:21,0:21:53.17:0,53,351	0/0:20,0:20:41.46:0,41,297	0/0:21,0:21:6.74:0,7,32	0/0:16,0:16:47.37:0,47,321	0/0:19,0:19:51.12:0,51,1063	0/1:17,0:17:30.08:124,0,30	0/0:18,0:18:44.46:0,44,506	0/0:14,0:13:32.71:0,33,317	0/0:43,0:43:99:0,117,1199	0/0:18,0:18:35.52:0,36,263	0/0:10,0:10:19.95:0,20,123	0/0:23,0:23:59.27:0,59,407	0/1:12,2:14:84.11:84,0,104	0/1:19,1:20:7.43:188,0,7	0/0:23,0:23:59.30:0,59,629	0/0:13,0:13:32.88:0,33,287
chr10	43175017	.	CCCT	C	1904.47	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-5.886;DP=547;FS=0.000;HRun=0;HaplotypeScore=127.7110;InbreedingCoeff=0.9600;MQ=79.94;MQ0=0;MQRankSum=-1.038;QD=19.63;ReadPosRankSum=-0.287;VQSLOD=3.4820;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:73.50:0,73,335	0/0:16,0:16:35.42:0,35,145	0/0:19,0:18:41.22:0,41,617	0/0:19,0:18:38.92:0,39,447	0/0:20,0:20:42.62:0,43,187	0/0:17,0:17:35.08:0,35,182	0/0:18,0:18:35.09:0,35,185	0/0:17,0:17:29.79:0,30,234	0/0:27,0:27:55.29:0,55,265	1/1:7,12:19:42:478,42,0	1/1:2,6:8:3.01:45,3,0	0/0:21,0:21:40.95:0,41,175	0/0:21,0:21:41.41:0,41,161	0/0:20,0:20:37.10:0,37,171	1/1:19,1:20:29.12:146,29,0	0/0:16,0:16:39.19:0,39,166	0/0:21,0:21:45.11:0,45,794	1/1:5,12:17:42.12:603,42,0	0/0:17,0:17:41.76:0,42,374	0/0:14,0:13:31.97:0,32,210	0/0:44,0:44:99:0,115,827	0/0:18,0:18:28.66:0,29,125	0/0:9,0:9:16.45:0,16,57	0/0:23,0:23:49.92:0,50,231	1/1:11,3:14:21.06:287,21,0	1/1:4,15:19:42.07:525,42,0	0/0:23,0:23:56.03:0,56,421	0/0:13,0:13:31.80:0,32,180
chr10	43175018	.	CCT	C	2534.85	PASS	AB=0.990;AC=29;AF=0.518;AN=56;BaseQRankSum=2.628;DP=549;FS=20.833;HRun=0;HaplotypeScore=113.7532;InbreedingCoeff=0.0939;MQ=80.60;MQ0=0;MQRankSum=-3.305;QD=6.52;ReadPosRankSum=9.478;VQSLOD=1.0109;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:38,0:38:57.65:173,0,58	0/1:16,0:16:1.93:127,0,2	0/0:20,0:19:40.29:0,40,559	0/0:19,0:18:44.39:0,44,455	0/1:20,0:20:34.79:83,0,35	0/1:17,0:17:38.32:60,0,38	0/1:18,0:18:42.39:53,0,42	0/0:17,0:17:29.03:0,29,144	0/1:28,0:28:87.47:90,0,87	1/1:17,0:17:41.66:310,42,0	0/1:8,0:8:11.17:11,0,40	0/1:23,0:23:22.70:100,0,23	1/1:21,0:21:18.89:148,19,0	0/1:20,0:20:34.77:77,0,35	1/1:2,18:20:33.07:439,33,0	0/1:16,0:16:10.44:77,0,10	0/0:20,0:20:48.08:0,48,704	1/1:18,0:18:26.09:287,26,0	0/0:17,0:17:25.22:0,25,226	0/1:14,0:13:14.31:14,0,23	0/0:44,0:44:44.78:0,45,239	1/1:18,0:18:16.03:109,16,0	1/1:9,0:9:10.14:55,10,0	0/1:23,0:23:45.90:91,0,46	0/1:12,2:14:43.82:105,0,44	1/1:18,1:19:22.60:276,23,0	0/0:23,0:23:18.34:0,18,120	1/1:12,0:12:9.39:39,9,0
chr10	43175349	.	C	CT	631.58	PASS	AC=12;AF=0.222;AN=54;BaseQRankSum=-0.321;DP=216;FS=18.696;HRun=9;HaplotypeScore=72.4514;InbreedingCoeff=0.6602;MQ=53.39;MQ0=2;MQRankSum=-5.815;QD=15.04;ReadPosRankSum=1.747;VQSLOD=2.3441;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:15:14.25:0,14,43	0/0:1,0:3:4.55:0,5,13	0/0:9,0:5:10.51:0,11,75	0/0:11,0:5:4.54:0,5,30	0/0:5,0:5:5.99:0,6,51	0/0:12,0:12:26.99:0,27,234	0/0:6,0:5:15:0,15,129	0/0:26,0:26:59.95:0,60,517	0/0:5,0:5:5.99:0,6,52	1/1:2,4:6:12.92:134,13,0	1/1:2,1:3:3.01:33,3,0	0/0:2,0:2:6:0,6,51	0/0:3,0:3:5.99:0,6,51	0/0:3,0:3:2.99:0,3,26	1/1:6,4:10:12.03:133,12,0	./.	0/0:17,0:17:41.97:0,42,363	1/1:2,5:7:12.03:133,12,0	0/0:20,0:20:41.94:0,42,357	0/0:8,0:7:21:0,21,181	0/0:5,0:5:2.28:0,2,25	0/0:1,0:1:3:0,3,26	0/0:2,0:2:3:0,3,26	0/0:3,0:3:9:0,9,77	1/1:3,8:11:24.06:263,24,0	1/1:2,3:5:9.02:97,9,0	0/0:9,0:9:20.99:0,21,181	0/0:7,0:7:17.99:0,18,156
chr10	43176563	.	TGCC	T	3608.59	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=4.355;DP=521;FS=1.059;HRun=0;HaplotypeScore=85.9123;InbreedingCoeff=0.9304;MQ=62.84;MQ0=15;MQRankSum=-1.459;QD=24.55;ReadPosRankSum=5.260;VQSLOD=3.4153;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:37:71.98:0,72,1320	0/0:9,0:9:15.05:0,15,330	0/0:33,0:15:38.80:0,39,736	0/0:34,0:22:41.97:0,42,796	1/1:2,2:3:3.01:48,3,0	1/1:4,14:17:27.09:433,27,0	1/1:2,18:17:36.12:577,36,0	0/0:17,0:15:35.91:0,36,601	1/1:1,15:14:21.07:336,21,0	0/0:23,0:22:33.09:0,33,679	0/0:7,0:7:8.99:0,9,152	1/1:2,14:15:12.04:192,12,0	1/1:3,13:16:30.10:480,30,0	1/1:2,15:17:26.93:422,27,0	0/0:19,0:19:27.08:0,27,553	0/0:20,0:20:48.16:0,48,1008	0/0:27,0:27:66.02:0,66,1331	0/0:25,0:24:63.20:0,63,1334	0/0:17,0:16:38.81:0,39,628	0/0:9,0:9:18.06:0,18,393	0/0:45,0:45:93.03:0,93,1842	1/1:4,2:6:6.02:96,6,0	1/1:4,5:9:14.88:206,15,0	1/1:0,25:23:51.17:818,51,0	0/0:12,0:12:15:0,15,247	0/0:18,0:18:33.10:0,33,684	0/0:16,0:15:39.13:0,39,848	0/0:5,0:5:12.04:0,12,241
chr10	43179813	.	C	CAA	2051.62	PASS	AB=0.972;AC=24;AF=0.429;AN=56;BaseQRankSum=-7.704;DP=345;FS=1.787;HRun=12;HaplotypeScore=89.5775;InbreedingCoeff=0.4904;MQ=65.27;MQ0=6;MQRankSum=3.189;QD=11.72;ReadPosRankSum=-2.025;VQSLOD=2.1626;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:11:0.52:22,1,0	1/1:5,0:3:3.43:21,3,0	0/0:28,0:11:7.18:0,7,61	0/0:28,0:10:13.34:0,13,81	0/0:15,0:15:17.71:0,18,74	0/0:8,0:8:18.99:0,19,84	0/0:8,0:8:13.77:0,14,64	1/1:7,10:17:28.88:262,29,0	0/0:6,0:7:15.40:0,15,62	0/1:12,0:12:21.28:69,0,21	0/1:11,0:11:17.71:18,0,18	0/0:9,0:10:9.89:0,10,72	0/0:5,0:5:5.82:0,6,18	0/0:6,0:7:15.27:0,15,60	0/1:8,1:9:2.47:81,0,2	1/1:10,0:10:13.49:182,13,0	0/0:18,0:17:29.94:0,30,265	0/1:5,0:5:39.94:40,0,51	1/1:4,7:14:25.97:238,26,0	1/1:1,13:15:40.04:501,40,0	1/1:5,6:12:14.68:147,15,0	0/0:11,0:13:9.73:0,10,64	0/0:10,0:11:11.57:0,12,42	0/0:7,0:7:7.98:0,8,32	0/1:13,0:14:16.13:140,0,16	0/1:10,0:9:2.48:51,0,2	1/1:4,14:20:23.97:297,24,0	1/1:0,8:9:14.54:177,15,0
chr10	43179816	.	AAAAAAAAAAC	A	3921.06	PASS	AB=0.911;AC=22;AF=0.393;AN=56;BaseQRankSum=2.387;DP=349;FS=57.179;HRun=0;HaplotypeScore=124.1870;InbreedingCoeff=0.6090;MQ=66.59;MQ0=5;MQRankSum=-6.511;QD=30.40;ReadPosRankSum=3.036;VQSLOD=1.2519;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:26.86:0,27,475	0/0:5,0:3:6.02:0,6,151	0/0:34,0:12:22.19:0,22,197	0/0:29,0:10:17.02:0,17,173	1/1:8,8:15:31.11:680,31,0	0/1:4,5:8:18.82:430,0,19	1/1:3,5:8:7.28:278,7,0	0/0:15,0:14:27.55:0,28,696	1/1:5,2:7:14.92:266,15,0	0/0:12,0:12:7.22:0,7,186	0/1:11,0:11:31.04:57,0,31	1/1:5,5:10:26.49:481,26,0	1/1:5,0:5:8.85:95,9,0	1/1:3,4:7:17.52:380,18,0	0/1:9,0:9:4.87:5,0,100	0/0:12,0:12:32.89:0,33,627	0/0:15,0:14:33.09:0,33,1415	0/0:6,0:6:3.51:0,4,237	0/0:15,0:15:30:0,30,1046	0/0:15,0:15:41.95:0,42,1400	0/0:11,0:11:21.06:0,21,652	1/1:8,5:13:31.88:587,32,0	1/1:4,9:12:17.93:386,18,0	1/1:1,6:7:9.03:249,9,0	0/1:14,0:14:26.44:26,0,64	0/0:8,0:8:3.18:0,3,59	0/0:22,0:22:29.97:0,30,1189	0/0:9,0:9:15.05:0,15,652
chr10	43179819	.	AAAAAAAC	A	3517.96	PASS	AB=0.975;AC=30;AF=0.536;AN=56;BaseQRankSum=1.584;DP=361;FS=37.537;HRun=0;HaplotypeScore=111.3778;InbreedingCoeff=0.2769;MQ=68.52;MQ0=6;MQRankSum=-4.964;QD=16.36;ReadPosRankSum=1.561;VQSLOD=1.0553;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:16.17:0,16,283	0/0:4,0:3:6.02:0,6,89	0/0:40,0:13:18.20:0,18,193	0/0:32,0:12:17.65:0,18,145	0/1:13,0:13:0.69:334,0,1	0/1:9,0:8:5.02:237,0,5	0/1:8,0:8:15.27:141,0,15	0/1:18,0:17:12.03:12,0,552	0/1:7,0:7:9.76:139,0,10	1/1:11,2:14:15.90:293,16,0	1/1:8,1:9:14.83:206,15,0	0/1:10,0:10:2.26:219,0,2	1/1:4,0:4:0.53:14,1,0	1/1:7,0:7:3.02:195,3,0	1/1:7,2:9:19.63:230,20,0	0/1:4,0:11:2.10:2,0,253	0/0:15,0:14:33.07:0,33,1039	0/1:4,2:6:87.72:88,0,120	0/1:16,0:15:6.74:7,0,764	0/1:15,0:15:35.76:36,0,843	0/0:13,0:13:25.33:0,25,573	1/1:13,0:13:0.63:297,1,0	1/1:13,0:12:6.33:199,6,0	1/1:7,0:7:9.03:144,9,0	1/1:7,8:15:30.06:497,30,0	1/1:10,1:11:26.80:229,27,0	0/0:22,0:22:33:0,33,809	0/0:9,0:9:15.05:0,15,429
chr10	43179822	.	A	AC	34.49	PASS	AB=0.716;AC=2;AF=0.036;AN=56;BaseQRankSum=0.572;DP=372;FS=4.999;HRun=0;HaplotypeScore=98.3798;InbreedingCoeff=-0.0272;MQ=68.04;MQ0=6;MQRankSum=1.062;QD=2.16;ReadPosRankSum=0.865;VQSLOD=2.0293;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:12,1:13:13.89:0,14,85	0/1:3,1:3:6.01:6,0,14	0/0:41,0:13:22.49:0,22,127	0/0:34,0:14:13.28:0,13,121	0/0:11,0:11:30.89:0,31,159	0/0:9,0:8:22.70:0,23,145	0/0:8,0:8:14.13:0,14,91	0/0:18,0:17:32.44:0,32,222	0/0:7,0:7:18.79:0,19,114	0/0:15,0:15:39.26:0,39,298	0/0:9,0:9:17.64:0,18,100	0/0:11,0:11:19.74:0,20,143	0/0:5,0:5:3:0,3,61	0/0:10,0:10:16.18:0,16,113	0/0:10,0:10:23.49:0,23,173	0/1:5,7:12:48.51:108,0,49	0/0:15,0:14:33.10:0,33,431	0/0:6,0:6:12.69:0,13,121	0/0:15,0:14:28.10:0,28,197	0/0:15,0:15:33.58:0,34,185	0/0:13,0:13:21.53:0,22,157	0/0:13,0:13:31.80:0,32,177	0/0:13,0:12:19.87:0,20,114	0/0:6,0:6:8.43:0,8,41	0/0:14,0:14:27.59:0,28,153	0/0:12,0:12:26.96:0,27,192	0/0:22,0:22:27.05:0,27,163	0/0:11,0:11:10.26:0,10,62
chr10	43179833	.	AAC	A	342.72	PASS	AB=0.952;AC=11;AF=0.196;AN=56;BaseQRankSum=4.906;DP=346;FS=61.486;HRun=0;HaplotypeScore=86.7195;InbreedingCoeff=0.2396;MQ=66.75;MQ0=4;MQRankSum=-5.262;QD=3.99;ReadPosRankSum=2.194;VQSLOD=-0.5064;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,8:15:10.77:158,11,0	0/1:2,2:3:1.68:31,0,2	0/0:30,0:8:14.94:0,15,76	0/0:32,1:17:22:0,22,200	0/0:9,0:9:1.82:0,2,15	0/0:7,0:6:4.30:0,4,21	0/0:7,0:7:5.78:0,6,42	0/0:18,0:17:3.69:0,4,475	0/1:6,0:6:2.27:2,0,69	0/1:13,0:13:6.71:7,0,131	0/1:6,0:6:0.27:0,0,23	0/0:9,0:9:9.21:0,9,63	0/0:8,0:8:21.82:0,22,156	0/0:10,0:10:11.36:0,11,96	0/0:13,0:13:12.84:0,13,155	1/1:6,7:13:17.70:247,18,0	0/0:15,0:14:26.41:0,26,444	0/1:5,0:5:10.29:10,0,47	0/0:13,0:12:34.67:0,35,525	0/0:13,0:13:16.91:0,17,301	0/0:13,0:13:13.42:0,13,335	0/0:12,0:12:15.11:0,15,104	0/1:10,0:10:3.53:4,0,47	0/0:8,0:8:4.78:0,5,31	0/1:14,0:14:20.63:21,0,35	0/0:12,0:12:22.91:0,23,203	0/0:19,0:19:43.44:0,43,546	0/0:11,0:11:21:0,21,284
chr10	43180423	.	A	ATGTTTGTT	2223.29	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=7.428;DP=731;FS=4.637;HRun=0;HaplotypeScore=206.5258;InbreedingCoeff=0.9235;MQ=71.66;MQ0=0;MQRankSum=-7.305;QD=35.29;ReadPosRankSum=-2.462;VQSLOD=2.7475;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:32:38.92:984,39,0	1/1:8,0:10:18.05:515,18,0	0/0:31,0:29:72.17:0,72,1422	0/0:29,0:25:56.93:0,57,1132	0/0:26,0:26:69.16:0,69,1669	0/0:19,0:19:51.16:0,51,1272	0/0:15,0:15:39.13:0,39,988	0/0:44,0:44:99:0,108,2335	0/0:22,0:22:63.16:0,63,1280	0/0:29,0:28:55.65:0,56,548	0/0:25,0:24:60.88:0,61,483	0/0:22,0:22:57.17:0,57,1250	0/0:26,0:26:69.22:0,69,1607	0/0:17,0:17:45.13:0,45,1061	0/0:32,0:32:77.80:0,78,462	1/1:5,15:21:19.95:865,20,0	0/0:32,0:32:87.25:0,87,2033	0/0:14,0:13:1.64:0,2,80	0/0:25,0:25:54.16:0,54,1062	0/0:21,0:21:60.16:0,60,1401	0/0:27,0:27:78.27:0,78,1861	0/0:31,0:31:81.26:0,81,1897	0/0:30,0:30:84.27:0,84,1890	0/0:27,0:27:78.16:0,78,1865	0/0:29,0:29:46.83:0,47,551	0/0:29,0:28:71.25:0,71,553	0/0:48,0:47:99:0,138,3220	0/0:18,0:18:51.11:0,51,1223
chr10	43180433	.	A	ATTTG	8000.10	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-9.199;DP=749;FS=3.878;HRun=0;HaplotypeScore=121.2716;InbreedingCoeff=0.9843;MQ=65.15;MQ0=1;MQRankSum=-1.458;QD=35.24;ReadPosRankSum=1.340;VQSLOD=5.0094;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:28:24.12:276,24,0	1/1:9,0:9:9.02:130,9,0	0/0:34,0:29:34.30:0,34,596	0/0:31,0:25:35.27:0,35,556	0/0:28,0:28:72.20:0,72,1107	0/0:20,0:20:51.16:0,51,818	0/0:17,0:17:45.07:0,45,679	0/0:43,0:43:90.27:0,90,1378	0/0:21,0:21:36.12:0,36,599	1/1:12,22:35:75.19:1632,75,0	1/1:8,16:23:39.13:958,39,0	0/0:23,0:23:48.15:0,48,763	0/0:26,0:26:57.18:0,57,920	0/0:17,0:17:42.12:0,42,644	1/1:8,24:33:69.24:1697,69,0	1/1:21,0:21:24.05:363,24,0	0/0:35,0:35:73.14:0,73,1330	1/1:2,16:18:36.12:885,36,0	0/0:20,0:20:27.09:0,27,440	0/0:21,0:21:54.16:0,54,867	0/0:29,0:29:66.18:0,66,1013	0/0:32,0:32:69.18:0,69,1044	0/0:28,0:28:57.19:0,57,948	0/0:27,0:27:66.21:0,66,1067	1/1:10,18:28:11.39:858,11,0	1/1:11,18:28:54.16:1201,54,0	0/0:49,0:48:99:0,117,1912	0/0:20,0:20:57.13:0,57,854
chr10	43181257	.	G	GA	245.79	PASS	AB=0.979;AC=20;AF=0.357;AN=56;BaseQRankSum=11.121;DP=795;FS=199.846;HRun=3;HaplotypeScore=395.8774;InbreedingCoeff=-0.4080;MQ=46.33;MQ0=10;MQRankSum=-11.869;QD=0.50;ReadPosRankSum=13.246;VQSLOD=-0.4708;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:41,0:40:2.31:2,0,119	1/1:10,0:10:6.94:18,7,0	0/0:38,0:18:18.17:0,18,148	0/0:44,1:22:5.73:0,6,293	0/1:34,0:34:17.19:17,0,191	0/0:20,0:20:9.31:0,9,127	0/1:27,0:27:19.39:19,0,45	0/0:26,0:26:39.74:0,40,313	0/1:35,0:35:18.72:19,0,127	0/0:34,0:34:12.17:0,12,262	0/1:21,0:21:14.18:14,0,18	0/1:28,0:28:12.29:12,0,75	0/1:29,0:29:14.74:15,0,100	0/0:31,0:31:3.26:0,3,188	0/1:29,0:30:15.06:15,0,102	0/1:25,0:25:2.33:2,0,19	0/1:16,1:17:22.80:23,0,97	0/1:15,1:16:25.19:25,0,33	0/0:19,0:19:23.33:0,23,167	0/0:43,0:43:12.07:0,12,203	0/1:20,2:22:68.02:68,0,80	0/1:31,0:31:36.88:37,0,40	0/1:29,0:29:13.23:13,0,74	0/1:30,1:31:26.27:26,0,132	0/1:27,0:27:40.22:40,0,44	0/0:40,0:40:11.16:0,11,151	0/1:30,0:31:15.37:15,0,131	0/1:10,0:11:18.92:19,0,60
chr10	43181258	.	G	GA	24385.01	PASS	AB=0.990;AC=54;AF=0.964;AN=56;BaseQRankSum=0.437;DP=823;FS=4.700;HRun=1;HaplotypeScore=340.5670;InbreedingCoeff=0.0378;MQ=46.19;MQ0=10;MQRankSum=-4.867;QD=29.63;ReadPosRankSum=3.255;VQSLOD=3.5011;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,34:42:92.82:1136,93,0	1/1:2,9:11:27.08:361,27,0	0/1:40,0:19:10.80:11,0,27	0/1:47,1:22:58.03:58,0,162	1/1:3,31:34:88.42:1057,88,0	1/1:5,15:20:51.14:648,51,0	1/1:4,25:29:81.67:1018,82,0	1/1:11,16:27:76.97:961,77,0	1/1:7,31:38:99:1244,99,0	1/1:9,26:35:96.72:1230,97,0	1/1:3,19:22:63.20:812,63,0	1/1:4,23:27:78.72:1035,79,0	1/1:3,25:28:70.40:1009,70,0	1/1:12,22:34:87.35:1036,87,0	1/1:4,25:29:84.69:1058,85,0	1/1:4,22:26:69.69:906,70,0	1/1:11,8:19:42.26:506,42,0	1/1:5,13:18:51.14:662,51,0	1/1:8,11:19:57.05:693,57,0	1/1:15,29:44:99:1524,121,0	1/1:13,11:24:47.83:578,48,0	1/1:5,26:32:96.06:1183,96,0	1/1:7,24:31:81.02:1024,81,0	1/1:7,24:31:69.07:825,69,0	1/1:6,25:31:57.67:1025,58,0	1/1:8,33:41:99:1461,116,0	1/1:10,22:32:85.64:1052,86,0	1/1:3,6:9:21.06:271,21,0
chr10	43181265	.	G	GA	24087.18	PASS	AB=0.849;AC=54;AF=0.964;AN=56;BaseQRankSum=1.022;DP=828;FS=18.723;HRun=2;HaplotypeScore=361.8531;InbreedingCoeff=-0.0371;MQ=43.05;MQ0=10;MQRankSum=-3.325;QD=29.09;ReadPosRankSum=3.322;VQSLOD=-0.0126;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:44,3:46:40.68:1170,41,0	1/1:11,2:13:34.35:436,34,0	0/1:32,7:16:99:103,0,121	0/1:41,9:23:99:266,0,171	1/1:37,2:39:77.06:953,77,0	1/1:19,2:21:55.64:694,56,0	1/1:30,0:30:82.94:1040,83,0	1/1:24,1:25:62.75:717,63,0	1/1:39,1:40:99:1390,106,0	1/1:31,0:31:90.23:1141,90,0	1/1:23,0:23:65.55:835,66,0	1/1:27,0:27:75.15:986,75,0	1/1:27,0:27:75.25:1010,75,0	1/1:30,0:30:77.43:989,77,0	1/1:29,0:29:84.17:1101,84,0	1/1:26,0:26:72.13:931,72,0	1/1:17,2:19:27.01:465,27,0	1/1:18,0:18:46.44:566,46,0	1/1:15,0:15:41.58:505,42,0	1/1:38,0:38:99:1323,99,0	1/1:23,2:25:46.98:528,47,0	1/1:33,0:33:93.15:1164,93,0	1/1:29,0:29:76.60:992,77,0	1/1:33,1:34:63.19:777,63,0	1/1:35,1:36:99:1212,100,0	1/1:40,1:41:99:1435,115,0	1/1:32,1:33:84.03:1047,84,0	1/1:9,0:9:25.32:312,25,0
chr10	43181270	.	A	AG	26741.76	PASS	AB=0.868;AC=54;AF=0.964;AN=56;BaseQRankSum=0.979;DP=844;FS=2.332;HRun=2;HaplotypeScore=365.3013;InbreedingCoeff=-0.0371;MQ=44.62;MQ0=9;MQRankSum=-0.549;QD=31.68;ReadPosRankSum=2.886;VQSLOD=3.1690;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,36:44:99:1380,108,0	1/1:4,12:16:36.08:511,36,0	0/1:35,7:19:99:151,0,134	0/1:44,7:24:99:257,0,129	1/1:12,29:41:75.21:1036,75,0	1/1:3,18:21:58.43:796,58,0	1/1:7,25:32:63.81:1048,64,0	1/1:7,19:26:60.03:828,60,0	1/1:5,35:40:99:1506,108,0	1/1:5,26:31:84.24:1171,84,0	1/1:4,20:24:63.12:851,63,0	1/1:4,24:28:75.19:1038,75,0	1/1:2,24:26:75.16:1040,75,0	1/1:7,27:34:87.18:1189,87,0	1/1:3,26:29:78.24:1100,78,0	1/1:3,23:26:69.19:961,69,0	1/1:7,13:20:42.14:589,42,0	1/1:6,16:22:46.56:741,47,0	1/1:3,13:16:48.15:668,48,0	1/1:8,29:37:96.24:1328,96,0	1/1:8,18:26:51.56:690,52,0	1/1:4,27:31:74.92:1057,75,0	1/1:2,25:27:81.25:1123,81,0	1/1:9,25:34:69.41:923,69,0	1/1:3,34:37:99:1436,102,0	1/1:2,39:41:99:1664,120,0	1/1:1,31:32:90.18:1258,90,0	1/1:0,10:10:30.05:404,30,0
chr10	43182481	.	GC	G	14482.57	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=5.781;DP=697;FS=8.885;HRun=4;HaplotypeScore=97.2859;InbreedingCoeff=0.9834;MQ=82.07;MQ0=0;MQRankSum=-4.158;QD=31.48;ReadPosRankSum=6.701;VQSLOD=4.1731;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,30:33:81.25:972,81,0	1/1:0,13:13:36.11:432,36,0	0/0:23,0:23:57.09:0,57,722	0/0:33,0:33:87.25:0,87,1141	1/1:0,27:27:78.21:919,78,0	1/1:0,18:18:45.14:540,45,0	1/1:1,39:40:99:1332,111,0	0/0:24,0:24:69.23:0,69,964	1/1:1,15:16:39.12:465,39,0	1/1:0,32:32:96.28:1141,96,0	1/1:0,16:16:45.14:540,45,0	1/1:1,30:31:78.24:936,78,0	1/1:0,23:23:69.16:810,69,0	1/1:1,25:26:69.21:828,69,0	1/1:1,24:25:63.19:756,63,0	1/1:0,22:22:60.18:720,60,0	0/0:31,0:31:90.30:0,90,1258	1/1:3,12:15:30.09:360,30,0	0/0:28,0:28:75.24:0,75,1027	0/0:21,0:21:63.19:0,63,848	0/0:55,0:55:99:0,159,2154	1/1:3,16:19:48.15:576,48,0	1/1:1,16:17:42.13:504,42,0	1/1:6,27:33:75.16:882,75,0	1/1:0,27:27:72.22:864,72,0	1/1:0,27:27:78.20:909,78,0	0/0:20,0:20:54.18:0,54,749	0/0:2,0:2:6.02:0,6,84
chr10	43182605	.	GCACACACACACACACA	G	2008.17	PASS	AB=0.851;AC=19;AF=0.396;AN=48;BaseQRankSum=1.979;DP=614;FS=0.000;HRun=0;HaplotypeScore=225.7679;InbreedingCoeff=0.0725;MQ=62.38;MQ0=25;MQRankSum=-0.288;QD=5.58;ReadPosRankSum=1.084;VQSLOD=2.5012;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:35,0:33:99:133,0,260	./.	./.	0/0:29,0:17:3.01:0,3,41	0/1:9,14:23:19.20:219,0,19	0/1:7,0:17:38.51:62,0,39	0/1:33,0:36:99:111,0,143	0/0:14,0:14:11.94:0,12,105	0/1:9,0:20:18.94:63,0,19	0/0:19,0:19:21.16:0,21,394	./.	1/1:9,15:24:5.64:260,6,0	1/1:4,13:17:8.39:185,8,0	1/1:8,0:9:15.02:236,15,0	0/0:16,0:14:24.54:0,25,369	0/0:15,0:15:21.32:0,21,267	0/0:37,0:40:87.19:0,87,2740	0/0:17,0:16:32.26:0,32,584	0/1:17,0:16:21.32:34,0,21	0/0:16,0:16:15.09:0,15,122	0/1:46,0:41:26.20:26,0,183	1/1:10,19:28:3.01:130,3,0	./.	1/1:36,0:39:2.20:471,2,0	0/1:20,0:22:23.19:23,0,222	0/0:11,0:15:27.53:0,28,364	0/1:21,0:20:14.94:213,0,15	0/0:6,0:6:9.84:0,10,79
chr10	43182638	.	CACACACACACACACAT	C	2275.13	PASS	AB=1.000;AC=18;AF=0.360;AN=50;BaseQRankSum=2.241;DP=669;FS=2.404;HRun=0;HaplotypeScore=248.4063;InbreedingCoeff=-0.0482;MQ=48.38;MQ0=76;MQRankSum=1.203;QD=5.66;ReadPosRankSum=2.171;VQSLOD=2.3666;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:37,0:31:99:173,0,305	./.	./.	./.	0/1:22,0:22:33.56:144,0,34	0/1:22,0:19:35.65:36,0,165	0/1:44,0:39:16.99:17,0,219	0/0:25,0:18:11.36:0,11,60	0/1:24,0:23:35.25:35,0,171	0/0:31,0:23:59.26:0,59,694	0/0:10,0:7:3:0,3,25	0/1:21,0:18:59.31:209,0,59	0/1:21,0:17:40.36:130,0,40	0/1:18,0:14:45.71:139,0,46	0/0:17,0:14:33.45:0,33,453	0/0:19,0:18:27.38:0,27,360	0/0:46,0:44:99:0,106,2950	0/0:30,0:29:59.74:0,60,1075	1/1:29,0:24:19.95:322,20,0	0/1:11,0:11:8.49:119,0,8	1/1:56,0:45:16.89:406,17,0	0/1:33,0:26:62.19:100,0,62	0/0:17,0:16:5.99:0,6,49	0/1:37,0:35:99:234,0,103	0/0:28,0:28:35.11:0,35,501	0/0:29,0:21:14.54:0,15,409	1/1:6,14:18:9.06:295,9,0	0/1:7,0:6:3.51:79,0,4
chr10	43182652	.	CAT	C	1289.61	PASS	AB=0.991;AC=19;AF=0.352;AN=54;BaseQRankSum=5.613;DP=696;FS=15.867;HRun=0;HaplotypeScore=128.8190;InbreedingCoeff=0.2609;MQ=48.58;MQ0=76;MQRankSum=1.429;QD=3.29;ReadPosRankSum=-1.313;VQSLOD=1.1354;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:34,1:28:51.67:397,52,0	./.	0/0:8,0:2:2.97:0,3,20	0/0:11,0:7:12.43:0,12,87	0/1:24,0:24:36.75:37,0,96	0/0:24,0:21:24.96:0,25,235	0/1:37,0:32:20.32:20,0,323	0/1:27,0:19:66.94:67,0,132	0/0:27,0:26:32.67:0,33,268	0/0:29,0:21:45.63:0,46,556	0/0:12,0:9:8.99:0,9,74	0/0:27,0:23:25.69:0,26,203	0/1:24,0:19:0.64:1,0,82	0/0:20,0:16:6.48:0,6,183	0/0:19,0:16:24.13:0,24,404	0/1:17,1:17:2.53:3,0,100	0/1:41,0:39:25.11:25,0,698	0/1:33,0:32:36.12:36,0,393	0/1:32,0:25:99:218,0,113	1/1:11,0:11:17.72:147,18,0	1/1:52,0:41:44.52:349,45,0	0/0:38,0:32:24.43:0,24,198	0/0:21,0:20:14.98:0,15,123	0/1:32,1:31:14.20:14,0,240	0/0:29,0:29:13.43:0,13,482	0/0:34,0:26:32.86:0,33,496	1/1:19,0:17:11.59:82,12,0	1/1:6,0:5:11.38:72,11,0
chr10	43182986	.	CTGAGACCAAG	C	8651.29	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=13.765;DP=652;FS=1.950;HRun=0;HaplotypeScore=198.4873;InbreedingCoeff=0.9961;MQ=80.95;MQ0=0;MQRankSum=-14.574;QD=75.89;ReadPosRankSum=3.369;VQSLOD=4.9229;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:57:99:0,169,8410	0/0:13,0:13:39.13:0,39,2034	0/0:20,0:20:60.20:0,60,2796	0/0:18,0:18:51.17:0,51,2334	0/0:16,0:16:42.14:0,42,2183	0/0:17,0:17:51.16:0,51,2468	0/0:21,0:21:63.22:0,63,3180	0/0:32,0:32:96.32:0,96,4907	0/0:21,0:21:63.22:0,63,3189	0/0:26,0:26:78.27:0,78,3965	0/0:13,0:13:36.12:0,36,1797	1/1:2,24:26:69.24:2341,69,0	1/1:4,20:25:48.16:1628,48,0	1/1:5,21:26:60.21:2036,60,0	0/0:31,0:31:93.32:0,93,4900	0/0:16,0:16:48.16:0,48,2556	0/0:39,0:39:99:0,117,5925	0/0:14,0:14:42.13:0,42,2051	0/0:17,0:17:48.16:0,48,2413	0/0:19,0:19:57.20:0,57,2955	0/0:56,0:55:99:0,166,8456	1/1:2,15:17:39.13:1323,39,0	1/1:1,9:9:24.08:814,24,0	1/1:2,8:10:15.05:508,15,0	0/0:23,0:23:69.24:0,69,3478	0/0:28,0:28:84.29:0,84,4479	0/0:32,0:32:90.29:0,90,4494	0/0:9,0:9:27.09:0,27,1441
chr10	43183716	.	G	GA	4684.36	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-15.455;DP=631;FS=1.165;HRun=8;HaplotypeScore=59.5745;InbreedingCoeff=0.9992;MQ=70.20;MQ0=0;MQRankSum=-0.958;QD=26.62;ReadPosRankSum=3.654;VQSLOD=5.4982;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,44:49:99:1212,105,0	1/1:2,11:13:27.08:312,27,0	0/0:21,0:19:37.93:0,38,316	0/0:18,0:15:30.27:0,30,273	0/0:32,0:32:84.02:0,84,764	0/0:23,0:23:63:0,63,568	0/0:20,0:20:54.03:0,54,494	0/0:25,0:25:62.84:0,63,552	0/0:24,0:24:57.02:0,57,521	0/0:37,0:37:99:0,99,902	0/0:19,0:19:45.02:0,45,412	1/1:1,18:19:51.15:589,51,0	1/1:4,11:15:36.11:414,36,0	1/1:4,10:14:30.09:344,30,0	0/0:20,0:20:60.03:0,60,549	0/0:15,0:15:35.99:0,36,323	0/0:31,0:31:72:0,72,653	0/0:23,0:23:63.03:0,63,576	0/0:23,0:22:63.03:0,63,574	0/0:25,0:25:60.02:0,60,547	0/0:16,0:16:41.05:0,41,363	1/1:1,16:17:45.05:499,45,0	1/1:1,24:25:60.18:692,60,0	1/1:3,21:24:54.16:623,54,0	0/0:23,0:23:66.03:0,66,604	0/0:28,0:28:84.05:0,84,769	0/0:23,0:23:63.02:0,63,572	0/0:8,0:8:24.02:0,24,223
chr10	43184317	.	TA	T	2749.65	PASS	AB=0.733;AC=18;AF=0.321;AN=56;BaseQRankSum=4.029;DP=566;FS=3.212;HRun=12;HaplotypeScore=87.3181;InbreedingCoeff=0.7985;MQ=70.63;MQ0=1;MQRankSum=0.004;QD=13.75;ReadPosRankSum=1.556;VQSLOD=4.2030;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,37:40:98.54:758,99,0	1/1:2,4:6:5.97:46,6,0	0/0:10,0:9:8.31:0,8,96	0/0:10,1:10:1.28:0,1,50	0/0:27,1:29:60.76:0,61,778	0/0:23,1:24:42.90:0,43,616	0/0:17,1:18:20.09:0,20,376	0/0:23,1:25:45.66:0,46,605	0/0:23,2:25:33.86:0,34,518	1/1:2,21:23:62.63:477,63,0	0/1:4,17:21:7.14:313,0,7	0/0:5,0:24:42.78:0,43,230	0/0:1,0:11:19.66:0,20,100	0/0:3,0:21:37.10:0,37,202	1/1:1,12:13:32.79:248,33,0	1/1:3,11:14:20.79:162,21,0	0/0:38,0:38:99:0,99,962	1/1:2,12:15:12.25:195,12,0	0/0:16,0:16:42.08:0,42,422	0/0:24,2:27:28.36:0,28,588	0/0:18,0:18:42.07:0,42,421	0/0:4,0:17:34.54:0,35,204	0/0:3,0:22:44:0,44,227	0/0:4,0:14:34.74:0,35,230	1/1:3,17:21:34.87:261,35,0	1/1:4,21:25:62.72:484,63,0	0/0:15,0:15:12.96:0,13,284	0/1:17,2:21:4.74:5,0,284
chr10	43185566	.	G	GTT	2554.24	PASS	AB=0.967;AC=14;AF=0.318;AN=44;BaseQRankSum=-3.266;DP=408;FS=12.472;HRun=10;HaplotypeScore=90.1579;InbreedingCoeff=0.7468;MQ=65.34;MQ0=14;MQRankSum=-1.946;QD=21.65;ReadPosRankSum=1.480;VQSLOD=1.5720;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:3,0:2:1.88:0,2,16	./.	0/0:56,0:15:25.86:0,26,191	0/0:49,0:18:7.96:0,8,93	./.	./.	./.	0/0:35,0:34:74.06:0,74,683	./.	1/1:4,12:15:27.56:388,28,0	1/1:4,11:17:41.08:518,41,0	0/1:13,0:14:1.57:2,0,157	0/0:3,0:3:3:0,3,26	0/0:8,0:8:8.93:0,9,71	1/1:1,4:6:6.02:89,6,0	./.	0/0:36,0:36:83.91:0,84,839	1/1:7,8:17:42.07:540,42,0	0/0:22,1:22:12.52:0,13,323	0/0:21,0:22:29.81:0,30,362	0/0:8,0:7:18:0,18,161	0/0:5,0:5:11.71:0,12,85	0/0:8,0:8:8.98:0,9,76	0/0:6,0:6:8.92:0,9,69	1/1:8,8:15:30.10:433,30,0	1/1:14,10:26:63.46:744,63,0	0/0:21,0:22:15.75:0,16,278	0/1:5,0:5:0:0,0,0
chr10	43185577	.	G	GT	5279.40	PASS	AB=1.000;AC=37;AF=0.841;AN=44;BaseQRankSum=1.353;DP=453;FS=19.999;HRun=10;HaplotypeScore=69.7966;InbreedingCoeff=0.7437;MQ=58.90;MQ0=32;MQRankSum=-0.282;QD=19.27;ReadPosRankSum=2.165;VQSLOD=3.8941;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:5,0:2:0:0,0,0	./.	0/0:75,0:17:21.51:0,22,142	0/0:60,0:16:8.80:0,9,100	./.	./.	./.	1/1:11,23:33:78.19:842,78,0	./.	1/1:8,5:9:20.41:193,20,0	1/1:4,16:19:39.06:408,39,0	1/1:1,12:13:27.07:298,27,0	1/1:1,3:3:3.01:33,3,0	1/1:3,7:8:9.02:99,9,0	1/1:6,2:8:6.49:65,6,0	./.	0/0:35,0:35:77.78:0,78,661	1/1:6,15:20:36.10:394,36,0	1/1:9,15:21:51.04:524,51,0	1/1:8,15:23:54.05:550,54,0	1/1:2,8:9:16.96:193,17,0	1/1:2,2:4:6.02:66,6,0	1/1:0,7:7:12.03:130,12,0	1/1:2,2:4:6.02:66,6,0	1/1:1,11:13:27.07:296,27,0	1/1:8,19:26:57.46:593,57,0	1/1:5,22:26:42.11:461,42,0	1/1:4,3:6:8.89:69,9,0
chr10	43185586	.	T	TTA	2551.14	PASS	AB=1.000;AC=15;AF=0.341;AN=44;BaseQRankSum=-3.861;DP=469;FS=18.044;HRun=0;HaplotypeScore=77.7998;InbreedingCoeff=0.4494;MQ=53.82;MQ0=57;MQRankSum=0.787;QD=13.36;ReadPosRankSum=-0.587;VQSLOD=1.8723;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:71,0:13:25.71:0,26,224	0/0:58,0:13:4.57:0,5,141	./.	./.	./.	1/1:33,2:31:44.31:797,44,0	0/0:5,0:3:2.97:0,3,20	0/1:12,0:7:8.39:8,0,21	0/1:18,0:17:6.17:6,0,29	0/0:14,0:13:0.50:0,1,30	0/0:5,0:3:1.25:0,1,3	0/0:9,0:7:2.60:0,3,6	0/0:9,0:7:2.80:0,3,6	./.	0/0:35,0:33:83.91:0,84,1092	0/1:20,0:19:2.01:2,0,59	1/1:26,1:20:40.50:559,41,0	1/1:20,6:25:37.17:599,37,0	1/1:12,1:9:1.45:190,1,0	0/0:2,0:2:2.13:0,2,5	0/0:7,0:7:5.19:0,5,12	0/0:2,0:2:2.13:0,2,5	0/0:18,0:15:8.13:0,8,50	0/0:28,0:25:8.35:0,8,145	1/1:26,2:25:42.01:416,42,0	1/1:11,0:7:9.03:117,9,0
chr10	43185770	.	AGCCCCAAGATATAATT	A	4549.33	PASS	AC=12;AF=0.273;AN=44;BaseQRankSum=8.983;DP=329;FS=10.374;HRun=0;HaplotypeScore=151.4704;InbreedingCoeff=0.8884;MQ=47.65;MQ0=34;MQRankSum=-8.551;QD=89.20;ReadPosRankSum=3.238;VQSLOD=3.7651;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:12,0:9:27.09:0,27,1524	0/0:14,0:11:30.10:0,30,2203	./.	./.	./.	0/0:36,0:29:90.31:0,90,6467	0/0:5,0:1:2.97:0,3,20	1/1:1,6:6:15.05:699,15,0	1/1:0,3:3:3.01:140,3,0	0/0:12,0:12:36.08:0,36,2334	0/0:7,0:6:18.06:0,18,1281	0/0:16,0:16:45.15:0,45,3202	1/1:2,10:11:27.09:1153,27,0	./.	0/0:30,0:28:78.27:0,78,5292	1/1:4,5:8:12.04:559,12,0	0/0:23,0:18:54.19:0,54,3951	0/0:18,0:16:45.15:0,45,3123	0/0:35,0:27:75.26:0,75,5755	0/0:7,0:6:18.06:0,18,1415	0/0:6,0:5:12.04:0,12,816	0/0:28,0:26:75.26:0,75,5556	1/1:0,7:7:18.06:839,18,0	1/1:2,11:11:26.94:1159,27,0	0/0:19,0:18:48.12:0,48,3409	0/0:4,0:3:9.03:0,9,603
chr10	43185971	.	TC	T	33.17	PASS	AC=8;AF=0.160;AN=50;BaseQRankSum=1.726;DP=431;FS=4.170;HRun=2;HaplotypeScore=64.6434;InbreedingCoeff=0.7674;MQ=82.11;MQ0=1;MQRankSum=0.904;QD=4.74;ReadPosRankSum=-3.299;VQSLOD=-0.5349;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	./.	1/1:0,2:2:3.01:38,3,0	0/0:17,0:16:48.13:0,48,679	0/0:26,0:22:44.89:0,45,782	1/1:1,1:1:3.01:39,3,0	1/1:0,2:2:3.01:38,3,0	1/1:0,1:1:3.01:37,3,0	0/0:21,0:21:63.19:0,63,903	./.	0/0:14,0:14:39.13:0,39,569	0/0:20,0:19:57.19:0,57,851	0/0:22,0:21:48.16:0,48,719	0/0:10,0:10:30.10:0,30,448	0/0:17,0:17:45.15:0,45,673	0/0:23,0:23:66.22:0,66,988	./.	0/0:34,0:33:93.27:0,93,1368	0/0:20,0:19:54.17:0,54,789	0/0:20,0:20:60.19:0,60,857	0/0:19,0:19:57.19:0,57,850	0/0:32,0:32:96.33:0,96,1437	0/0:22,0:22:66.22:0,66,989	0/0:23,0:22:60.20:0,60,898	0/0:24,0:21:57.18:0,57,835	0/0:8,0:8:21.07:0,21,314	0/0:21,0:21:63.19:0,63,921	0/0:23,0:23:69.23:0,69,1032	0/0:8,0:8:24.08:0,24,358
chr10	43186091	.	CG	C	3678.99	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=0.086;DP=532;FS=3.919;HRun=2;HaplotypeScore=69.5522;InbreedingCoeff=0.9948;MQ=66.75;MQ0=1;MQRankSum=-0.341;QD=36.43;ReadPosRankSum=4.067;VQSLOD=4.3498;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,108,1538	0/0:10,0:10:30.10:0,30,448	0/0:22,0:18:52.37:0,52,694	0/0:24,0:22:41.27:0,41,524	0/0:18,0:18:45:0,45,605	0/0:18,0:17:54.01:0,54,748	0/0:27,0:27:81.19:0,81,1139	0/0:20,0:20:60.10:0,60,812	0/0:20,0:20:57.15:0,57,821	1/1:0,21:21:63.18:801,63,0	1/1:1,10:11:30.10:389,30,0	0/0:19,0:19:54.18:0,54,808	0/0:6,0:6:18.06:0,18,265	0/0:18,0:18:51.16:0,51,737	1/1:0,15:15:45.15:584,45,0	0/0:14,0:14:42.01:0,42,562	0/0:40,0:40:99:0,114,1653	1/1:1,22:23:59.59:778,60,0	0/0:18,0:18:51.06:0,51,724	0/0:13,0:13:39.12:0,39,562	0/0:23,0:23:69.22:0,69,1004	0/0:14,0:14:42.11:0,42,588	0/0:10,0:10:30.09:0,30,427	0/0:37,0:37:99:0,111,1641	1/1:0,15:15:39.13:505,39,0	1/1:0,16:16:48.16:622,48,0	0/0:19,0:19:54.11:0,54,781	0/0:5,0:5:15.02:0,15,196
chr10	43188303	.	TC	T	1346.28	PASS	AB=0.699;AC=44;AF=0.846;AN=52;BaseQRankSum=-3.608;DP=132;FS=0.000;HRun=3;HaplotypeScore=46.6927;InbreedingCoeff=-0.1649;MQ=94.45;MQ0=0;MQRankSum=-3.782;QD=10.20;ReadPosRankSum=1.472;VQSLOD=1.1234;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,7:10:29.48:205,29,0	./.	0/1:13,0:11:37.89:38,0,53	0/1:10,0:9:2.84:3,0,72	1/1:1,5:6:11.63:88,12,0	0/1:3,5:8:1.20:122,0,1	1/1:4,2:6:1.53:33,2,0	1/1:6,2:8:20.34:121,20,0	0/1:1,3:4:10.94:56,0,11	1/1:0,4:4:11.62:70,12,0	./.	1/1:0,7:7:17.85:132,18,0	1/1:2,0:2:2.90:16,3,0	1/1:0,3:3:8.88:62,9,0	1/1:1,1:2:2.92:17,3,0	0/1:1,4:5:15.98:30,0,16	1/1:1,3:4:3.21:28,3,0	1/1:0,2:2:5.89:39,6,0	1/1:1,5:6:14.07:75,14,0	1/1:1,0:1:2.90:16,3,0	1/1:2,1:3:3.40:18,3,0	1/1:2,0:2:5.75:30,6,0	0/1:2,1:3:18.74:19,0,19	1/1:3,1:4:5.50:32,5,0	0/1:1,4:5:11.18:43,0,11	0/1:1,5:6:2.24:77,0,2	1/1:0,6:6:8.85:59,9,0	1/1:0,2:2:5.96:43,6,0
chr10	43190067	.	G	GT	347.77	PASS	AB=0.593;AC=5;AF=0.093;AN=54;BaseQRankSum=1.443;DP=265;FS=43.478;HRun=0;HaplotypeScore=52.5545;InbreedingCoeff=0.6029;MQ=84.42;MQ0=0;MQRankSum=0.977;QD=9.15;ReadPosRankSum=4.521;VQSLOD=1.8314;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:5,11:16:3.06:94,0,3	1/1:4,3:7:17.73:168,18,0	0/0:24,0:13:15.53:0,16,253	0/0:15,0:13:19.45:0,19,184	0/0:6,0:6:9:0,9,76	0/0:7,0:7:20.95:0,21,171	0/0:9,0:9:17.82:0,18,129	0/0:15,0:15:11.95:0,12,94	0/0:5,0:5:9:0,9,78	0/0:13,0:13:29.80:0,30,235	0/0:7,0:7:12:0,12,103	0/0:7,0:7:17.99:0,18,153	0/0:4,0:4:8.97:0,9,71	0/0:9,0:9:15.37:0,15,114	0/0:12,0:12:35.98:0,36,307	1/1:15,0:15:34.40:212,34,0	0/0:16,0:16:38.83:0,39,312	0/0:11,0:11:23.87:0,24,185	0/0:8,0:8:14.90:0,15,113	0/0:6,0:6:5.96:0,6,46	0/0:5,0:5:5.97:0,6,46	0/0:3,0:3:3:0,3,26	./.	0/0:13,0:13:18.72:0,19,132	0/0:10,0:10:8.98:0,9,74	0/0:9,0:9:11.92:0,12,91	0/0:5,0:5:14.93:0,15,116	0/0:4,0:4:5.99:0,6,49
chr10	43190077	.	GA	G	1313.42	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=5.500;DP=261;FS=25.251;HRun=2;HaplotypeScore=35.4882;InbreedingCoeff=0.8835;MQ=81.75;MQ0=0;MQRankSum=-0.014;QD=12.75;ReadPosRankSum=2.645;VQSLOD=0.6347;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:14:19.64:148,20,0	1/1:5,0:5:13.94:68,14,0	0/0:19,0:12:25.32:0,25,215	0/0:12,0:11:16.58:0,17,173	1/1:4,0:4:5.95:43,6,0	1/1:6,0:6:17.51:117,18,0	1/1:10,0:11:25.95:193,26,0	0/0:19,0:19:50.89:0,51,431	1/1:5,0:5:5.50:19,5,0	0/0:11,0:11:28.84:0,29,231	0/0:3,0:3:8.99:0,9,77	1/1:9,0:9:21.08:188,21,0	1/1:6,0:6:11.94:89,12,0	1/1:8,0:8:14.52:105,15,0	0/0:12,0:12:35.93:0,36,306	1/1:1,13:14:30.05:367,30,0	0/0:12,0:13:32.35:0,32,272	0/0:10,0:10:25.20:0,25,202	0/0:6,0:6:17.77:0,18,131	0/0:9,0:9:18.44:0,18,150	0/0:6,0:6:15:0,15,129	1/1:5,0:5:8.99:74,9,0	1/1:4,1:6:6:53,6,0	1/1:8,0:10:7.07:66,7,0	0/0:16,0:16:32.58:0,33,254	0/0:10,0:10:20.75:0,21,156	0/0:9,0:9:26.97:0,27,228	0/0:3,0:3:2.98:0,3,25
chr10	43190504	.	G	GC	2934.34	PASS	AB=0.904;AC=29;AF=0.518;AN=56;BaseQRankSum=3.277;DP=350;FS=4.852;HRun=0;HaplotypeScore=63.7446;InbreedingCoeff=0.5409;MQ=77.67;MQ0=1;MQRankSum=-2.366;QD=12.81;ReadPosRankSum=3.389;VQSLOD=4.4712;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:29,2:31:42.85:104,0,43	1/1:5,1:6:8.95:76,9,0	0/0:12,0:11:1.88:0,2,159	0/0:16,0:16:25.73:0,26,269	1/1:6,0:6:8.66:48,9,0	0/0:11,0:11:5.19:0,5,24	0/1:16,0:16:14.30:64,0,14	0/0:15,0:15:36.75:0,37,296	1/1:11,0:11:22.63:116,23,0	1/1:13,0:13:28.33:209,28,0	0/0:4,0:4:2.17:0,2,6	1/1:6,12:18:38.90:480,39,0	1/1:2,12:14:36.57:426,37,0	1/1:1,15:16:36.09:424,36,0	1/1:13,0:13:5.44:32,5,0	0/1:15,0:15:9.85:10,0,25	0/0:18,0:18:45:0,45,530	1/1:12,0:12:5.61:46,6,0	0/0:8,0:8:23.66:0,24,178	0/0:5,0:5:6.90:0,7,47	0/0:9,0:9:26.85:0,27,243	0/1:3,8:11:7.34:166,0,7	1/1:0,8:8:14.70:140,15,0	1/1:4,16:20:52.49:606,52,0	0/1:13,0:13:5.68:53,0,6	1/1:6,0:6:17.74:131,18,0	0/0:16,0:16:20.51:0,21,149	0/0:7,0:7:16.25:0,16,112
chr10	43190505	.	G	GCC	5880.75	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=2.293;DP=364;FS=2.429;HRun=1;HaplotypeScore=60.5292;InbreedingCoeff=0.9150;MQ=78.25;MQ0=1;MQRankSum=-1.788;QD=22.79;ReadPosRankSum=2.214;VQSLOD=3.3285;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,25:31:45.07:719,45,0	1/1:1,5:6:9.02:120,9,0	0/0:13,0:12:24.48:0,24,276	0/0:17,0:17:28.80:0,29,361	1/1:1,5:6:9.03:142,9,0	1/1:2,0:11:7.54:62,8,0	1/1:5,11:16:29.85:373,30,0	0/0:16,0:16:39.12:0,39,531	1/1:0,11:12:24.08:342,24,0	1/1:4,11:16:42.01:550,42,0	1/1:4,1:5:4.81:28,5,0	1/1:17,0:18:52.91:636,53,0	1/1:13,1:14:37.32:447,37,0	1/1:14,1:15:35.95:445,36,0	1/1:2,12:14:11.67:129,12,0	1/1:16,0:16:28.70:271,29,0	0/0:19,0:19:54:0,54,715	1/1:1,12:13:6.02:101,6,0	0/0:6,0:6:18.05:0,18,231	0/0:4,0:4:11.37:0,11,93	0/0:9,0:9:26.45:0,26,344	1/1:11,0:11:20.81:206,21,0	1/1:8,0:8:15.02:181,15,0	1/1:20,0:20:55.01:656,55,0	1/1:4,9:18:17.78:164,18,0	1/1:1,7:8:23.79:308,24,0	0/0:15,0:15:18.40:0,18,218	0/0:7,0:7:21:0,21,225
chr10	43191221	.	GT	G	167.95	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=2.843;DP=492;FS=4.274;HRun=1;HaplotypeScore=135.7023;InbreedingCoeff=0.9067;MQ=64.39;MQ0=2;MQRankSum=-4.030;QD=7.63;ReadPosRankSum=-0.628;VQSLOD=0.6308;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,5:18:22.18:207,22,0	1/1:2,2:4:6.02:72,6,0	0/0:28,0:22:62.99:0,63,861	0/0:18,0:14:38.94:0,39,543	0/0:15,0:15:42.08:0,42,474	0/0:16,0:16:38.59:0,39,392	0/0:23,0:23:50.83:0,51,582	0/0:9,0:9:24.08:0,24,373	0/0:10,0:10:27.09:0,27,350	0/0:27,0:27:80.50:0,81,847	0/0:13,0:13:32.62:0,33,314	0/0:14,0:14:38.59:0,39,435	0/0:20,0:20:57.15:0,57,719	0/0:18,0:18:44.49:0,44,484	0/0:21,0:21:53.93:0,54,551	0/0:17,0:17:35.94:0,36,278	0/0:20,0:20:52.85:0,53,884	0/0:25,0:25:60.10:0,60,679	0/0:17,0:16:51.17:0,51,762	0/0:7,0:7:18.06:0,18,259	0/0:34,0:34:78.05:0,78,1186	0/0:22,0:22:39.58:0,40,486	0/0:16,0:16:41.71:0,42,503	0/0:13,0:13:30.09:0,30,375	0/0:26,0:26:62.90:0,63,677	0/0:22,0:22:57.55:0,58,633	0/0:15,0:15:42.14:0,42,650	0/0:4,0:3:9.03:0,9,144
chr10	43191223	.	GT	G	560.43	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=4.267;DP=485;FS=8.761;HRun=1;HaplotypeScore=134.0887;InbreedingCoeff=0.9379;MQ=64.31;MQ0=2;MQRankSum=-2.948;QD=14.75;ReadPosRankSum=-0.451;VQSLOD=2.6051;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:19:21.76:205,22,0	1/1:4,0:4:6.38:72,6,0	0/0:28,0:22:63.11:0,63,850	0/0:18,0:14:38.15:0,38,542	0/0:15,0:15:42.08:0,42,472	0/0:15,0:15:35.59:0,36,368	0/0:22,0:22:47:0,47,494	0/0:9,0:9:24.08:0,24,373	0/0:10,0:10:27.09:0,27,348	0/0:27,0:27:79.40:0,79,809	0/0:12,0:12:29.62:0,30,291	0/0:13,0:13:35.58:0,36,398	0/0:21,0:21:56.50:0,57,655	0/0:18,0:18:45.36:0,45,486	0/0:19,0:19:50.41:0,50,497	1/1:4,11:15:37.80:418,38,0	0/0:20,0:20:52.83:0,53,867	0/0:26,0:26:60.07:0,60,662	0/0:17,0:16:51.17:0,51,761	0/0:7,0:7:18.06:0,18,259	0/0:34,0:34:78.05:0,78,1185	0/0:21,0:21:36.57:0,37,448	0/0:16,0:16:41.70:0,42,488	0/0:13,0:13:30:0,30,375	0/0:26,0:26:62.70:0,63,671	0/0:22,0:22:60.07:0,60,652	0/0:14,0:13:36.12:0,36,575	0/0:4,0:3:9.03:0,9,144
chr10	43191227	.	GT	G	4902.67	PASS	AB=0.979;AC=42;AF=0.750;AN=56;BaseQRankSum=9.759;DP=482;FS=20.479;HRun=1;HaplotypeScore=120.3089;InbreedingCoeff=0.5873;MQ=64.58;MQ0=2;MQRankSum=-3.243;QD=12.41;ReadPosRankSum=1.056;VQSLOD=2.3590;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:20:27.03:208,27,0	1/1:4,0:4:6.56:73,7,0	0/0:25,0:19:44.57:0,45,484	0/0:19,0:15:32.01:0,32,395	1/1:16,0:16:40.74:236,41,0	1/1:15,0:15:35.68:212,36,0	1/1:23,0:23:30.30:269,30,0	0/1:10,0:10:28.92:29,0,91	1/1:10,0:10:23.64:99,24,0	1/1:23,1:24:70.62:481,71,0	1/1:11,0:11:26.41:170,26,0	1/1:11,0:11:28.17:159,28,0	1/1:20,1:21:54.20:272,54,0	1/1:18,0:18:48.79:297,49,0	1/1:19,0:19:49.74:316,50,0	1/1:12,0:12:36.03:414,36,0	0/0:23,0:23:52.71:0,53,696	1/1:27,0:27:14.52:282,15,0	0/1:16,1:16:74.73:75,0,175	0/1:7,0:7:39.46:39,0,50	0/1:35,1:36:60.64:61,0,259	1/1:18,1:19:33.39:174,33,0	1/1:15,0:15:34.80:166,35,0	1/1:12,0:12:29.77:160,30,0	1/1:27,0:27:59.71:384,60,0	1/1:21,0:21:55.05:328,55,0	0/0:16,0:15:33.79:0,34,183	0/0:4,0:3:8.39:0,8,38
chr10	43191228	.	T	TG	6663.14	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=1.851;DP=500;FS=0.621;HRun=7;HaplotypeScore=127.4190;InbreedingCoeff=0.8300;MQ=64.88;MQ0=2;MQRankSum=-1.964;QD=15.42;ReadPosRankSum=1.607;VQSLOD=3.8559;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:27:7.24:79,7,0	1/1:5,0:5:2.08:19,2,0	0/0:23,0:19:17.21:0,17,277	0/0:20,0:16:14.34:0,14,190	1/1:16,0:16:38.56:259,39,0	1/1:16,0:16:28.71:206,29,0	1/1:24,0:24:44.44:331,44,0	1/1:4,9:13:21.02:236,21,0	1/1:10,0:10:23.73:203,24,0	1/1:25,0:25:66.78:413,67,0	1/1:10,0:10:17.87:133,18,0	1/1:11,0:11:24.42:213,24,0	1/1:21,0:21:53.82:453,54,0	1/1:18,0:18:39.29:311,39,0	1/1:19,0:19:41.50:284,42,0	1/1:12,0:12:7.24:45,7,0	0/0:23,0:23:37.34:0,37,417	1/1:27,0:27:27.21:318,27,0	1/1:5,11:15:34.59:361,35,0	1/1:4,4:8:11.95:108,12,0	1/1:4,33:37:44.82:804,45,0	1/1:18,0:18:26.88:214,27,0	1/1:16,0:16:33.45:286,33,0	1/1:14,0:14:11.08:151,11,0	1/1:26,0:26:57.32:398,57,0	1/1:21,0:21:52.76:329,53,0	1/1:1,17:17:33.10:398,33,0	1/1:1,3:3:9.03:109,9,0
chr10	43191231	.	G	GA	10946.82	PASS	AB=0.917;AC=46;AF=0.821;AN=56;BaseQRankSum=4.227;DP=505;FS=3.857;HRun=0;HaplotypeScore=105.2821;InbreedingCoeff=0.5146;MQ=66.72;MQ0=2;MQRankSum=-3.388;QD=25.11;ReadPosRankSum=5.455;VQSLOD=5.6929;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:27,2:29:34.41:290,34,0	0/1:3,3:6:1.46:22,0,1	0/0:25,0:19:42.89:0,43,455	0/0:21,0:17:32.04:0,32,436	1/1:0,16:16:42.07:593,42,0	1/1:5,11:16:41.82:492,42,0	1/1:3,20:23:59.85:739,60,0	0/1:14,0:14:28.05:28,0,75	1/1:1,9:10:29.88:394,30,0	1/1:2,22:24:72.11:975,72,0	1/1:0,9:9:18.06:267,18,0	1/1:0,9:9:27.04:370,27,0	1/1:4,17:22:63.17:862,63,0	1/1:3,14:17:51.03:655,51,0	1/1:0,16:16:42.14:621,42,0	1/1:11,1:12:35.77:298,36,0	0/0:23,0:23:68.33:0,68,806	1/1:3,24:27:15.26:751,15,0	0/1:16,0:15:42.16:46,0,42	0/1:7,0:7:9.69:10,0,32	1/1:37,0:37:3.38:213,3,0	1/1:4,13:18:38.58:468,39,0	1/1:5,13:18:42.04:555,42,0	1/1:8,8:16:38.15:415,38,0	1/1:2,25:27:59.92:878,60,0	1/1:0,24:24:63.06:872,63,0	1/1:18,0:17:10:98,10,0	1/1:5,0:4:8.03:35,8,0
chr10	43191238	.	T	TG	3476.57	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=-0.173;DP=493;FS=2.575;HRun=7;HaplotypeScore=130.0825;InbreedingCoeff=0.8859;MQ=67.43;MQ0=2;MQRankSum=-10.207;QD=23.65;ReadPosRankSum=-1.697;VQSLOD=1.7187;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:40.58:0,41,417	0/0:8,0:8:12.01:0,12,114	0/0:21,0:17:7.50:0,8,220	0/0:20,0:16:20.99:0,21,196	0/0:16,0:16:42.06:0,42,405	1/1:2,11:13:33.10:398,33,0	1/1:6,14:20:36.11:434,36,0	0/0:15,0:15:33.05:0,33,318	1/1:1,12:13:27.01:309,27,0	0/0:22,0:22:45.05:0,45,429	0/0:7,0:7:18.03:0,18,174	1/1:3,8:11:23.87:269,24,0	1/1:4,15:19:48.13:567,48,0	1/1:5,11:16:10.10:379,10,0	0/0:17,0:17:42.06:0,42,405	0/0:13,0:13:33.05:0,33,317	0/0:24,0:24:57.53:0,58,551	0/0:24,1:25:14.80:0,15,420	0/0:16,0:16:30.01:0,30,280	0/1:8,0:8:13.89:14,0,31	0/0:39,0:39:72.04:0,72,670	1/1:1,12:13:27.08:326,27,0	1/1:4,12:16:33.10:398,33,0	1/1:4,14:18:33.06:382,33,0	0/0:25,0:25:57.05:0,57,538	0/0:23,0:23:63.10:0,63,608	0/0:20,0:19:26.24:0,26,238	0/0:6,0:5:9.01:0,9,87
chr10	43192351	.	AG	A	955.75	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=4.268;DP=506;FS=4.295;HRun=6;HaplotypeScore=57.5943;InbreedingCoeff=0.9165;MQ=86.05;MQ0=0;MQRankSum=-3.486;QD=19.51;ReadPosRankSum=1.762;VQSLOD=3.2330;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,27:32:63.15:677,63,0	1/1:1,5:6:15.04:161,15,0	0/0:19,0:19:44.96:0,45,535	0/0:16,0:16:35.96:0,36,430	0/0:11,0:11:12.01:0,12,140	0/0:15,0:15:39.08:0,39,457	0/0:26,0:26:72.20:0,72,916	0/0:17,0:17:45.10:0,45,539	0/0:19,0:19:57.18:0,57,747	0/0:16,0:16:39.11:0,39,490	0/0:3,0:3:6.02:0,6,79	0/0:21,0:21:60.16:0,60,745	0/0:17,0:17:45.13:0,45,574	0/0:26,0:26:72.20:0,72,906	0/0:15,0:15:45.15:0,45,592	1/1:1,10:11:24.06:258,24,0	0/0:47,0:47:99:0,132,1689	0/0:22,0:22:63.19:0,63,812	0/0:25,0:25:63.18:0,63,797	0/0:6,0:6:15.04:0,15,197	0/0:39,0:39:99:0,108,1343	0/0:8,0:8:12.04:0,12,158	0/0:5,0:5:12.01:0,12,128	0/0:30,0:30:84.26:0,84,1092	0/0:9,0:9:15.05:0,15,197	0/0:14,0:14:33.11:0,33,434	0/0:19,0:19:57.08:0,57,681	0/0:12,0:12:33.11:0,33,432
chr10	43192467	.	A	AT	3660.34	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=4.122;DP=752;FS=4.522;HRun=1;HaplotypeScore=82.6101;InbreedingCoeff=0.9996;MQ=83.94;MQ0=0;MQRankSum=-5.240;QD=41.13;ReadPosRankSum=1.513;VQSLOD=4.1478;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,56:56:99:2383,160,0	1/1:1,15:16:41.97:603,42,0	0/0:24,0:24:66.21:0,66,839	0/0:24,0:24:72.23:0,72,935	0/0:24,0:24:69.21:0,69,878	0/0:17,0:17:51.17:0,51,662	0/0:36,0:36:99:0,105,1348	0/0:28,0:28:84.25:0,84,1053	0/0:33,0:33:96.31:0,96,1245	0/0:30,0:30:81.24:0,81,1032	0/0:17,0:17:48.16:0,48,623	0/0:34,0:34:99:0,99,1271	0/0:17,0:17:51.14:0,51,634	0/0:32,0:32:96.31:0,96,1246	0/0:29,0:29:87.27:0,87,1114	1/1:0,17:17:45.15:675,45,0	0/0:36,0:36:99:0,105,1330	0/0:20,0:20:57.19:0,57,740	0/0:33,0:33:87.26:0,87,1102	0/0:29,0:29:87.27:0,87,1115	0/0:49,0:49:99:0,141,1815	0/0:16,0:16:48.16:0,48,623	0/0:21,0:21:60.19:0,60,779	0/0:24,0:24:66.21:0,66,857	0/0:23,0:23:69.22:0,69,894	0/0:33,1:34:57.35:0,57,1239	0/0:24,0:24:72.22:0,72,919	0/0:9,0:9:27.09:0,27,350
chr10	43193867	.	A	ATTTAAGGCTTAAATAAC	50104.99	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-3.586;DP=695;FS=4.024;HRun=0;HaplotypeScore=316.1225;InbreedingCoeff=0.9871;MQ=66.86;MQ0=0;MQRankSum=-19.036;QD=155.61;ReadPosRankSum=0.807;VQSLOD=4.5028;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:78.25:0,78,3285	0/0:17,0:17:51.17:0,51,2077	0/0:14,0:15:20.90:0,21,490	0/0:9,0:9:9.54:0,10,245	0/0:32,0:32:78.24:0,78,3173	0/0:32,0:32:84.29:0,84,3517	0/0:12,0:12:21.07:0,21,800	0/0:39,0:39:81.26:0,81,3205	0/0:23,0:23:60.21:0,60,2589	1/1:24,12:38:96.33:6343,96,0	1/1:20,7:29:72.24:3871,72,0	1/1:18,7:27:66.23:4529,66,0	1/1:17,10:27:69.24:4900,69,0	1/1:13,5:19:45.15:2800,45,0	1/1:20,1:22:51.18:3221,51,0	0/0:19,0:19:48.16:0,48,1983	0/0:20,0:20:54.16:0,54,2086	1/1:7,1:9:12.04:784,12,0	0/0:23,0:23:45.12:0,45,1737	0/0:33,0:33:87.30:0,87,3499	0/0:15,0:15:36.10:0,36,1407	1/1:22,11:37:87.30:5747,87,0	1/1:22,14:36:85.23:5328,85,0	1/1:11,5:16:39.13:2155,39,0	1/1:27,7:35:93.32:6124,93,0	1/1:14,10:27:66.19:4302,66,0	0/0:45,0:45:99:0,105,4558	0/0:11,0:11:27.09:0,27,1279
chr10	43194522	.	A	ATG	14449.43	PASS	AB=0.559;AC=29;AF=0.518;AN=56;BaseQRankSum=-16.116;DP=800;FS=0.294;HRun=0;HaplotypeScore=94.7149;InbreedingCoeff=0.9431;MQ=76.26;MQ0=1;MQRankSum=-0.662;QD=34.49;ReadPosRankSum=3.345;VQSLOD=7.2901;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,56:64:99:2570,125,0	1/1:5,9:14:21.07:344,21,0	0/0:33,0:31:46.08:0,46,514	0/0:30,0:29:75.23:0,75,918	0/0:21,0:21:48.15:0,48,595	0/0:24,0:25:63.03:0,63,758	0/0:37,0:37:90.27:0,90,1103	0/0:34,0:34:81.25:0,81,993	0/0:23,0:23:63.20:0,63,780	1/1:4,29:35:87.27:1393,87,0	1/1:6,13:19:33.11:541,33,0	1/1:4,22:26:63.21:1027,63,0	1/1:6,15:21:48.16:770,48,0	1/1:11,18:28:29.30:765,29,0	0/1:7,26:33:5.14:964,0,5	1/1:5,20:25:20:848,20,0	0/0:36,0:37:65.35:0,65,926	1/1:5,16:21:39.13:640,39,0	0/0:31,0:33:47.95:0,48,549	0/0:25,0:25:66.18:0,66,803	0/0:44,0:44:99:0,105,1272	1/1:6,19:25:60.20:976,60,0	1/1:7,11:18:30.10:476,30,0	1/1:1,22:23:48.16:787,48,0	1/1:4,38:42:93.79:1526,94,0	1/1:5,17:24:31.53:822,32,0	0/0:24,0:24:57.15:0,57,680	0/0:13,0:13:21.07:0,21,259
chr10	43194983	.	A	AAGG	29399.06	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-12.215;DP=827;FS=1.712;HRun=0;HaplotypeScore=110.6583;InbreedingCoeff=0.9980;MQ=76.21;MQ0=0;MQRankSum=-2.791;QD=49.74;ReadPosRankSum=4.763;VQSLOD=7.2118;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,46:55:99:2485,117,0	1/1:0,11:11:33.11:701,33,0	0/0:29,0:29:62.42:0,62,938	0/0:20,0:20:17.09:0,17,695	1/1:7,30:37:90.31:1909,90,0	1/1:3,17:19:48.16:1039,48,0	1/1:8,35:44:93.06:2063,93,0	0/0:31,0:30:72.21:0,72,1025	1/1:4,31:35:90.31:1915,90,0	1/1:4,26:32:87.30:1843,87,0	1/1:2,18:19:51.18:1086,51,0	1/1:4,24:29:69.24:1453,69,0	1/1:4,27:31:72.25:1549,72,0	1/1:4,32:37:99:2255,105,0	1/1:6,34:43:99:2173,102,0	1/1:6,23:30:66.23:1409,66,0	0/0:29,0:29:78.27:0,78,1220	1/1:5,15:21:33.11:698,33,0	0/0:26,0:26:69.22:0,69,1054	0/0:21,0:21:57.19:0,57,890	0/0:37,0:37:99:0,99,1549	1/1:2,18:20:45.15:939,45,0	1/1:3,20:25:51.10:1084,51,0	1/1:5,28:32:63.22:1352,63,0	1/1:2,28:29:75.26:1622,75,0	1/1:9,28:37:87.28:1824,87,0	0/0:35,0:35:96.33:0,96,1501	0/0:8,0:8:24.08:0,24,376
chr10	43195697	.	GGT	G	475.73	PASS	AB=0.889;AC=22;AF=0.579;AN=38;BaseQRankSum=3.545;DP=545;FS=7.186;HRun=0;HaplotypeScore=100.7634;InbreedingCoeff=0.5102;MQ=76.41;MQ0=25;MQRankSum=-0.723;QD=2.32;ReadPosRankSum=-0.130;VQSLOD=1.2865;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	1/1:4,0:5:5.35:28,5,0	./.	./.	0/0:14,0:14:2.79:0,3,24	1/1:11,0:12:5.68:28,6,0	0/1:28,0:34:0.32:0,0,0	0/0:25,0:24:1.77:0,2,4	1/1:8,0:11:5.68:28,6,0	./.	./.	1/1:14,2:19:17.71:154,18,0	1/1:12,5:16:9.02:96,9,0	./.	1/1:19,0:26:14.20:70,14,0	1/1:12,0:14:5.68:28,6,0	0/1:16,0:17:2.12:2,0,100	./.	0/0:13,0:13:5.99:0,6,61	./.	0/0:48,0:46:5.59:0,6,49	0/0:6,5:12:2.94:0,3,44	1/1:2,1:3:3.01:32,3,0	1/1:25,7:31:11.90:127,12,0	./.	1/1:11,0:11:2.84:14,3,0	0/0:28,0:27:11.98:0,12,121	0/0:8,0:8:2.97:0,3,20
chr10	43195980	.	C	CCCTGTCT	16082.59	PASS	AC=28;AF=0.519;AN=54;BaseQRankSum=2.887;DP=394;FS=1.894;HRun=0;HaplotypeScore=115.9638;InbreedingCoeff=0.9843;MQ=70.82;MQ0=0;MQRankSum=-13.026;QD=90.86;ReadPosRankSum=1.542;VQSLOD=6.0492;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,5:10:15.05:611,15,0	1/1:5,4:9:18.06:705,18,0	0/0:16,0:14:36.08:0,36,876	0/0:22,0:17:42.14:0,42,1071	0/0:12,0:12:32.75:0,33,889	0/0:15,0:15:33.11:0,33,890	0/0:21,0:21:60.21:0,60,1624	0/0:26,0:26:75.73:0,76,1933	0/0:15,0:15:39.13:0,39,1051	1/1:10,6:16:45.11:1488,45,0	1/1:5,10:15:39.13:1578,39,0	1/1:3,10:14:30.10:1225,30,0	1/1:1,4:5:9.03:367,9,0	1/1:1,7:9:20.69:855,21,0	1/1:7,7:14:33.11:1302,33,0	1/1:6,11:16:42.14:1692,42,0	0/0:13,0:13:39.13:0,39,1051	1/1:0,5:5:15.05:613,15,0	0/0:17,0:16:39.13:0,39,1034	0/0:12,0:12:27.09:0,27,728	0/0:22,0:22:39.12:0,39,1018	1/1:3,9:14:24.08:977,24,0	1/1:5,11:16:33.11:1345,33,0	./.	1/1:5,13:18:45.63:1811,46,0	1/1:4,10:14:39.13:1512,39,0	0/0:9,0:9:24.04:0,24,510	0/0:9,0:9:27.09:0,27,690
chr10	43195989	.	TTCTCTC	T	495	PASS	AB=0.952;AC=15;AF=0.395;AN=38;BaseQRankSum=1.350;DP=378;FS=24.112;HRun=0;HaplotypeScore=144.6850;InbreedingCoeff=0.4118;MQ=63.20;MQ0=5;MQRankSum=-1.153;QD=5.16;ReadPosRankSum=0.231;VQSLOD=1.1672;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	1/1:7,0:7:3.01:52,3,0	./.	./.	0/0:9,0:11:0:0,0,0	0/0:15,0:16:9.03:0,9,161	0/1:19,0:20:66.46:66,0,135	0/0:30,0:30:2.03:0,2,5	0/0:13,1:15:3.01:0,3,73	0/0:17,0:13:9.03:0,9,181	./.	1/1:10,0:10:3.01:50,3,0	1/1:5,0:5:3.01:46,3,0	./.	0/0:17,0:17:0.47:0,0,1	./.	0/0:17,0:17:21.07:0,21,529	0/0:7,0:7:5.87:0,6,117	1/1:19,0:16:6.02:118,6,0	./.	1/1:19,0:19:3.01:47,3,0	0/0:12,0:12:0:0,0,0	./.	./.	0/0:18,0:16:0.47:0,0,1	0/0:18,0:16:6.49:0,6,140	1/1:5,3:8:9.03:177,9,0	1/1:8,0:8:3.01:58,3,0
chr10	43196033	.	CTCTCTCTT	C	426.38	PASS	AB=0.975;AC=13;AF=0.271;AN=48;BaseQRankSum=1.901;DP=309;FS=21.304;HRun=0;HaplotypeScore=100.0189;InbreedingCoeff=0.0116;MQ=35.75;MQ0=13;MQRankSum=-2.766;QD=4.40;ReadPosRankSum=3.457;VQSLOD=0.3369;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	0/1:6,1:7:10.98:94,0,11	0/0:18,0:4:12.01:0,12,109	0/0:16,0:1:2.84:0,3,14	0/0:10,0:9:12.80:0,13,81	0/0:13,0:12:24.23:0,24,425	0/0:24,0:24:44.46:0,44,589	0/0:18,0:18:25.99:0,26,286	0/0:14,3:17:34.33:0,34,291	0/1:11,0:5:8.95:9,0,149	./.	0/1:11,0:6:10.99:56,0,11	1/1:4,0:3:5.95:62,6,0	1/1:6,1:6:0.14:2,0,0	0/0:12,0:12:2.03:0,2,5	0/1:8,0:5:0:0,0,0	0/0:14,0:14:23.47:0,23,743	0/1:6,0:5:5.26:5,0,169	0/1:8,1:7:80.91:91,0,81	0/0:9,0:9:7.99:0,8,39	0/1:16,0:15:79.50:91,0,80	./.	0/0:14,0:9:2.03:0,2,6	./.	0/0:10,0:8:0.47:0,0,1	0/0:7,0:5:8.99:0,9,153	0/1:12,0:11:43.91:120,0,44	0/1:6,0:4:15.98:23,0,16
chr10	43196035	.	CTCTCTT	C	675.30	PASS	AB=0.951;AC=18;AF=0.375;AN=48;BaseQRankSum=1.131;DP=294;FS=29.982;HRun=0;HaplotypeScore=85.7750;InbreedingCoeff=0.0435;MQ=35.68;MQ0=13;MQRankSum=-1.786;QD=5.00;ReadPosRankSum=3.704;VQSLOD=0.0363;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	1/1:5,1:6:5.93:86,6,0	0/0:18,0:4:12.01:0,12,109	0/0:17,0:1:2.84:0,3,14	0/0:10,0:9:12.54:0,13,79	0/0:12,1:12:15.62:0,16,248	0/1:23,0:23:52.79:53,0,338	0/0:18,0:18:27.82:0,28,305	0/0:17,0:17:31.36:0,31,253	0/1:10,0:4:8.95:9,0,113	./.	1/1:9,1:5:5.91:84,6,0	1/1:4,0:3:5.95:81,6,0	1/1:5,1:5:0.14:2,0,0	0/0:12,0:12:1.72:0,2,4	0/1:8,0:5:0:0,0,0	0/1:14,0:14:0.41:0,0,520	0/1:6,0:5:5.14:5,0,102	0/1:6,2:6:80.90:122,0,81	0/0:8,0:8:7.05:0,7,37	0/1:16,0:15:39.09:108,0,39	./.	0/0:8,3:6:2.03:0,2,5	./.	0/0:8,0:6:0.47:0,0,1	0/1:6,0:4:10.09:10,0,98	0/1:10,2:11:10.20:179,0,10	0/1:5,1:4:15.98:68,0,16
chr10	43196050	.	ACGCGCGCG	A	648.28	PASS	AB=0.811;AC=12;AF=0.273;AN=44;BaseQRankSum=5.322;DP=353;FS=25.776;HRun=0;HaplotypeScore=86.8967;InbreedingCoeff=0.3525;MQ=32.41;MQ0=28;MQRankSum=-4.476;QD=8.00;ReadPosRankSum=-0.016;VQSLOD=0.2329;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	1/1:3,2:7:6.02:152,6,0	0/0:23,0:4:12.04:0,12,262	0/0:22,0:1:2.37:0,2,8	0/0:13,0:13:9.03:0,9,232	0/0:16,0:16:18.01:0,18,444	0/0:25,0:23:44.84:0,45,1374	0/1:18,1:16:35.84:36,0,1388	0/0:17,0:16:27.09:0,27,815	0/1:9,2:7:99:140,0,131	./.	1/1:10,2:6:5.05:81,5,0	1/1:0,0:3:6.02:145,6,0	1/1:6,2:6:3.01:57,3,0	0/0:8,5:10:1.55:0,2,4	0/1:2,3:2:0:0,0,0	0/0:18,0:16:45.04:0,45,1261	0/0:10,0:6:5.70:0,6,153	0/0:11,1:8:21.05:0,21,449	0/0:8,0:7:3.01:0,3,129	0/0:17,0:15:15.05:0,15,508	./.	./.	./.	./.	0/1:11,3:10:72.81:168,0,73	0/0:12,1:11:12.18:0,12,135	0/0:7,0:5:6.02:0,6,202
chr10	43196058	.	GCACACACA	G	339.10	PASS	AB=0.868;AC=6;AF=0.143;AN=42;BaseQRankSum=2.127;DP=353;FS=5.519;HRun=0;HaplotypeScore=80.5263;InbreedingCoeff=0.2990;MQ=31.03;MQ0=42;MQRankSum=-2.174;QD=9.69;ReadPosRankSum=0.422;VQSLOD=1.2440;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	1/1:4,0:4:3.56:12,4,0	./.	./.	0/0:18,0:17:6.02:0,6,164	0/0:16,0:15:12.04:0,12,333	0/0:28,0:23:33.32:0,33,1043	0/0:20,0:16:33.84:0,34,910	0/0:19,0:17:24.08:0,24,679	1/1:8,2:6:2.80:74,3,0	./.	0/0:11,0:5:3.01:0,3,37	0/0:3,0:3:1.72:0,2,4	0/0:11,0:6:0:0,0,0	0/0:10,2:9:1.55:0,2,4	0/1:7,0:3:0:0,0,0	0/0:18,0:14:36.12:0,36,987	0/0:11,0:6:2.97:0,3,20	0/0:13,0:10:18.01:0,18,295	0/0:11,0:10:3.48:0,3,113	0/0:17,0:14:3.01:0,3,68	./.	0/0:18,0:6:3.01:0,3,79	./.	./.	0/1:9,4:10:64.26:346,0,64	0/0:5,0:9:3.48:0,3,77	0/0:7,0:5:6.02:0,6,157
chr10	43196062	.	A	ACGCG	99.67	PASS	AB=0.933;AC=3;AF=0.071;AN=42;BaseQRankSum=2.769;DP=364;FS=4.561;HRun=0;HaplotypeScore=82.7631;InbreedingCoeff=0.1875;MQ=31.33;MQ0=44;MQRankSum=-3.743;QD=3.83;ReadPosRankSum=-1.272;VQSLOD=1.5182;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:5,0:4:6.02:0,6,81	./.	./.	0/0:17,0:16:3.48:0,3,38	0/0:17,0:16:14.41:0,14,237	0/0:29,0:24:39.09:0,39,746	0/0:20,0:16:30.61:0,31,366	0/0:20,0:18:27.09:0,27,518	0/0:10,0:6:9.49:0,9,108	./.	0/0:11,0:5:4.04:0,4,38	0/0:4,0:3:6.02:0,6,83	0/0:11,0:6:3.01:0,3,30	1/1:10,2:9:0.89:2,1,0	0/0:8,0:4:0:0,0,0	0/0:19,0:14:38.49:0,38,609	0/0:8,3:6:6.02:0,6,79	0/0:13,0:10:13.07:0,13,152	0/0:12,0:11:0.76:0,1,2	0/0:15,0:12:12.04:0,12,183	./.	0/0:20,0:8:3.01:0,3,31	./.	./.	0/1:12,1:10:69.76:171,0,70	0/0:14,0:12:5.59:0,6,66	0/0:11,0:9:16.22:0,16,121
chr10	43196107	.	GAGAGAGAGAGAGAGAGAGAGAGAA	G	369.68	PASS	AB=1.000;AC=14;AF=0.269;AN=52;BaseQRankSum=1.434;DP=398;FS=15.655;HRun=0;HaplotypeScore=145.3886;InbreedingCoeff=0.2747;MQ=38.49;MQ0=43;MQRankSum=0.246;QD=2.30;ReadPosRankSum=-5.550;VQSLOD=-0.3519;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	./.	0/0:8,0:7:9.03:0,9,326	0/0:6,0:4:7.78:0,8,49	0/0:10,0:4:8.32:0,8,68	1/1:21,0:20:6.01:75,6,0	1/1:7,9:15:2.94:18,3,0	1/1:21,0:16:13.22:218,13,0	0/0:23,0:22:53.47:0,53,1429	1/1:22,0:20:8.94:118,9,0	0/0:12,0:12:1.77:0,2,787	0/1:10,0:10:18.94:19,0,115	0/0:13,0:8:6.49:0,6,226	0/0:8,0:7:7.75:0,8,162	0/0:12,0:7:2.37:0,2,8	./.	0/1:9,0:8:11.04:11,0,20	0/0:21,0:16:39.97:0,40,2274	0/1:12,0:6:32.91:33,0,223	0/0:22,0:18:43.34:0,43,2015	0/0:12,0:10:16.10:0,16,432	0/0:9,0:7:9.01:0,9,261	0/1:20,0:15:5.95:6,0,643	0/1:23,0:14:18.69:19,0,444	0/1:7,0:3:0:0,0,0	0/0:9,0:9:2.48:0,2,146	0/0:14,0:13:12.52:0,13,987	0/0:13,0:11:9.02:0,9,504	0/0:16,0:13:28.33:0,28,1303
chr10	43196153	.	CAGG	C	6204.83	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=7.979;DP=391;FS=22.210;HRun=0;HaplotypeScore=91.1856;InbreedingCoeff=0.9772;MQ=79.38;MQ0=2;MQRankSum=-8.379;QD=38.30;ReadPosRankSum=2.317;VQSLOD=3.3965;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,16:15:27.09:449,27,0	1/1:0,5:5:12.04:200,12,0	0/0:25,0:21:47.58:0,48,952	0/0:27,0:20:25.10:0,25,773	0/0:12,0:12:30.10:0,30,666	0/0:11,0:11:15.05:0,15,310	0/0:23,0:23:66.08:0,66,1360	0/0:25,0:25:69.24:0,69,1502	0/0:16,0:16:45.15:0,45,1004	1/1:3,12:15:36.12:599,36,0	1/1:2,12:14:39.13:650,39,0	1/1:0,10:10:30.10:499,30,0	1/1:0,6:6:18.06:300,18,0	1/1:0,8:8:24.08:384,24,0	1/1:0,5:5:12.04:200,12,0	1/1:2,13:15:30.10:499,30,0	0/0:21,0:21:60.21:0,60,1360	1/1:0,7:7:15.05:250,15,0	0/0:17,0:17:42.14:0,42,927	0/0:11,0:11:33.11:0,33,747	0/0:12,0:12:33.11:0,33,704	1/1:0,19:19:42.14:699,42,0	1/1:1,11:12:27.08:425,27,0	1/1:0,9:9:9.92:152,10,0	1/1:1,7:8:18.06:300,18,0	1/1:1,12:13:36.12:599,36,0	0/0:12,0:12:33.11:0,33,738	0/0:16,0:16:48.16:0,48,1088
chr10	43196346	.	CT	C	3221.30	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=4.662;DP=600;FS=4.532;HRun=1;HaplotypeScore=81.6089;InbreedingCoeff=0.9888;MQ=88.64;MQ0=0;MQRankSum=-2.414;QD=29.28;ReadPosRankSum=2.642;VQSLOD=3.4917;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,156,2260	0/0:7,0:7:21.07:0,21,319	0/0:26,0:26:72.19:0,72,1021	0/0:27,0:27:70.92:0,71,947	0/0:22,0:22:57.14:0,57,794	0/0:21,0:21:60.17:0,60,875	0/0:31,0:31:93.24:0,93,1313	0/0:26,0:26:78.25:0,78,1141	0/0:25,0:25:75.21:0,75,1084	1/1:1,20:21:59.86:716,60,0	1/1:0,9:9:15.05:202,15,0	0/0:16,0:16:48.15:0,48,669	0/0:17,0:17:51.12:0,51,687	0/0:22,0:22:66.20:0,66,900	1/1:0,22:22:47.99:639,48,0	0/0:22,0:22:63.21:0,63,942	0/0:23,0:23:69.21:0,69,1027	1/1:1,20:21:11.78:666,12,0	0/0:12,0:12:36.12:0,36,550	0/0:21,0:21:63.13:0,63,896	0/0:34,0:34:99:0,102,1536	0/0:14,0:14:36.12:0,36,501	0/0:22,0:21:51.17:0,51,728	0/0:15,0:15:45.07:0,45,566	1/1:1,16:17:35.95:465,36,0	1/1:0,20:20:54.09:718,54,0	0/0:23,0:23:69.14:0,69,965	0/0:9,0:9:23.97:0,24,271
chr10	43197075	.	TTA	T	16119.33	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=12.822;DP=625;FS=7.841;HRun=0;HaplotypeScore=95.6459;InbreedingCoeff=0.9830;MQ=82.82;MQ0=0;MQRankSum=-5.706;QD=39.22;ReadPosRankSum=5.365;VQSLOD=6.9663;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,26:31:87.28:1248,87,0	1/1:1,10:11:27.09:397,27,0	0/0:29,0:29:84.29:0,84,1530	0/0:23,0:23:64.08:0,64,1103	1/1:0,22:22:54.18:794,54,0	1/1:1,23:24:60.20:876,60,0	1/1:1,29:30:78.26:1148,78,0	0/0:23,0:23:66.22:0,66,1194	1/1:0,29:29:78.26:1134,78,0	1/1:0,27:27:81.25:1170,81,0	1/1:0,12:12:30.10:442,30,0	1/1:1,23:24:66.22:971,66,0	1/1:0,21:21:47.76:706,48,0	1/1:2,21:23:63.21:920,63,0	1/1:2,27:29:75.25:1104,75,0	1/1:0,10:10:30.10:441,30,0	0/0:29,0:29:87.30:0,87,1616	1/1:2,26:28:78.26:1149,78,0	0/0:17,0:17:51.16:0,51,896	0/0:10,0:10:30.10:0,30,561	0/0:55,0:55:99:0,157,2884	1/1:1,14:15:33.11:486,33,0	1/1:0,10:10:30.10:442,30,0	1/1:0,26:26:75.25:1104,75,0	1/1:0,18:18:48.16:707,48,0	1/1:0,21:21:60.20:880,60,0	0/0:26,0:26:78.27:0,78,1450	0/0:2,0:2:6.02:0,6,112
chr10	43197104	.	TCAG	T	1755.73	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=3.356;DP=650;FS=9.232;HRun=0;HaplotypeScore=163.1158;InbreedingCoeff=0.9816;MQ=88.95;MQ0=0;MQRankSum=-6.409;QD=33.76;ReadPosRankSum=-2.331;VQSLOD=3.4932;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,28:37:90.25:1335,90,0	1/1:1,7:8:21.07:323,21,0	0/0:28,0:28:66.18:0,66,1419	0/0:28,0:28:63.23:0,63,1428	0/0:19,0:19:42.14:0,42,911	0/0:22,0:22:57.17:0,57,1200	0/0:27,0:27:63.22:0,63,1375	0/0:20,0:20:60.21:0,60,1282	0/0:27,0:27:63.22:0,63,1366	0/0:30,0:30:84.29:0,84,1822	0/0:12,0:12:30.10:0,30,651	0/0:27,0:27:75.24:0,75,1583	0/0:22,0:22:45.15:0,45,960	0/0:22,0:22:60.21:0,60,1307	0/0:24,0:24:51.17:0,51,1081	1/1:2,5:7:15.05:238,15,0	0/0:30,0:30:90.31:0,90,1946	0/0:31,0:31:75.26:0,75,1631	0/0:17,0:17:39.13:0,39,852	0/0:11,0:11:33.07:0,33,675	0/0:59,0:59:99:0,175,3750	0/0:21,0:21:51.16:0,51,1072	0/0:15,0:15:33.11:0,33,720	0/0:32,0:32:81.26:0,81,1726	0/0:23,0:22:60.21:0,60,1270	0/0:22,0:22:63.22:0,63,1319	0/0:25,0:25:69.24:0,69,1484	0/0:4,0:4:12.04:0,12,262
chr10	43197256	.	A	ATGTTTGGTGAGGTCATTAATTAG	1727.76	PASS	AB=0.917;AC=22;AF=0.917;AN=24;BaseQRankSum=-0.945;DP=34;FS=7.858;HRun=0;HaplotypeScore=34.2649;InbreedingCoeff=0.0073;MQ=142.89;MQ0=0;MQRankSum=-0.693;QD=66.45;ReadPosRankSum=-0.189;VQSLOD=0.5628;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,0:2:6.02:125,6,0	./.	1/1:1,0:6:18.06:1025,18,0	0/1:4,1:5:48.87:307,0,49	1/1:1,0:1:3.01:73,3,0	./.	./.	1/1:3,0:3:6.01:80,6,0	./.	./.	./.	./.	./.	./.	1/1:1,0:1:3.01:73,3,0	1/1:2,0:2:3:25,3,0	./.	1/1:1,0:1:2.99:23,3,0	1/1:1,0:1:0.89:2,1,0	1/1:1,0:1:3:25,3,0	./.	1/1:1,0:1:3.01:50,3,0	./.	./.	0/1:2,0:2:0:0,0,0	./.	./.	./.
chr10	43197289	.	C	CT	460.82	PASS	AC=44;AF=0.957;AN=46;DP=103;FS=0.000;HRun=0;HaplotypeScore=64.4759;InbreedingCoeff=0.2267;MQ=29.23;MQ0=0;QD=4.75;VQSLOD=2.3939;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,6:6:14.34:58,14,0	1/1:0,3:3:6.63:23,7,0	./.	./.	1/1:0,7:7:1.25:3,1,0	1/1:0,4:4:6.81:23,7,0	1/1:0,3:3:2.51:8,3,0	1/1:1,5:6:7.96:28,8,0	1/1:0,4:4:10.41:44,10,0	1/1:0,9:9:17.34:59,17,0	1/1:0,5:5:6.53:20,7,0	1/1:0,5:5:11.72:54,12,0	1/1:0,5:5:7.68:32,8,0	1/1:0,3:3:7.36:34,7,0	1/1:0,5:5:4.99:14,5,0	1/1:0,5:5:7.97:27,8,0	1/1:0,4:4:6.26:19,6,0	1/1:0,3:3:3.95:10,4,0	1/1:0,5:5:6.09:17,6,0	1/1:0,2:2:1.25:3,1,0	./.	1/1:1,3:4:3.78:11,4,0	./.	0/0:0,0:1:0.47:0,0,1	1/1:0,2:2:4.53:15,5,0	1/1:0,4:4:5.42:17,5,0	1/1:0,3:3:5.60:18,6,0	./.
chr10	43199725	.	AGT	A	191.76	PASS	AB=0.909;AC=19;AF=0.500;AN=38;BaseQRankSum=1.495;DP=205;FS=0.000;HRun=0;HaplotypeScore=55.2608;InbreedingCoeff=-0.0121;MQ=43.15;MQ0=6;MQRankSum=1.788;QD=1.65;ReadPosRankSum=-0.721;VQSLOD=0.8387;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:10,0:10:0:0,0,0	0/1:8,0:8:1.41:3,0,1	0/0:9,0:1:0:0,0,0	0/0:15,1:2:0.41:0,0,8	./.	./.	./.	0/1:5,4:8:28.58:29,0,128	0/0:2,1:2:0:0,0,0	0/1:8,0:7:23.34:23,0,116	./.	0/0:13,0:14:5.12:0,5,33	0/1:6,0:6:8.08:8,0,27	0/1:7,0:7:0:0,0,0	./.	./.	1/1:1,0:1:2.74:12,3,0	./.	0/1:7,4:10:59.43:93,0,59	0/1:7,2:6:0:0,0,0	./.	1/1:9,0:10:0.82:9,1,0	1/1:13,0:12:1.96:5,2,0	./.	0/0:5,0:5:0:0,0,0	0/1:10,1:10:42.18:42,0,112	1/1:4,1:5:2.74:12,3,0	1/1:4,0:4:8.38:51,8,0
chr10	43199733	.	TGA	T	112.73	PASS	AB=0.962;AC=22;AF=0.524;AN=42;BaseQRankSum=1.457;DP=294;FS=2.688;HRun=0;HaplotypeScore=67.8511;InbreedingCoeff=0.2162;MQ=48.14;MQ0=10;MQRankSum=1.192;QD=0.71;ReadPosRankSum=0.991;VQSLOD=1.1582;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:12,0:12:0:0,0,0	0/1:6,3:9:1.41:3,0,1	0/1:21,0:4:1:1,0,18	0/0:35,0:6:9.06:0,9,66	./.	./.	0/1:11,0:10:0:0,0,0	0/0:17,0:14:19.84:0,20,307	0/0:5,0:4:0:0,0,1	0/1:12,0:10:0.33:0,0,121	./.	0/0:16,0:16:15.29:0,15,96	0/1:8,0:7:1.21:1,0,58	1/1:7,0:7:2.04:6,2,0	./.	./.	1/1:1,0:1:2.97:20,3,0	1/1:1,0:1:2.37:8,2,0	0/1:21,0:18:36.19:36,0,137	0/0:9,3:8:0.47:0,0,1	./.	1/1:11,1:11:4.89:20,5,0	1/1:15,1:15:2.03:6,2,0	./.	0/0:6,0:6:0.47:0,0,1	0/1:16,1:15:20.62:21,0,230	1/1:5,1:5:2.37:8,2,0	1/1:3,1:4:1.75:91,2,0
chr10	43199747	.	AGTGTGTG	A	379.46	PASS	AB=0.957;AC=25;AF=0.521;AN=48;BaseQRankSum=2.802;DP=366;FS=15.534;HRun=0;HaplotypeScore=84.5912;InbreedingCoeff=0.3027;MQ=52.72;MQ0=22;MQRankSum=-1.098;QD=2.33;ReadPosRankSum=2.711;VQSLOD=0.2201;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:1.78:0,2,4	0/1:9,0:9:0.21:2,0,0	0/0:47,0:7:16.10:0,16,173	0/0:71,0:13:16.73:0,17,299	./.	1/1:8,0:8:2.04:6,2,0	0/1:10,0:9:0:0,0,0	0/1:18,0:15:14.49:14,0,44	0/0:6,0:5:0.47:0,0,1	0/0:8,0:6:6.35:0,6,32	./.	0/1:8,7:16:1.55:179,0,2	1/1:3,5:8:9.02:99,9,0	1/1:3,5:8:3.01:35,3,0	./.	1/1:7,0:7:6.04:41,6,0	0/0:1,0:1:2.97:0,3,20	1/1:1,0:1:2.04:6,2,0	0/0:20,0:17:9.98:0,10,151	0/0:13,0:9:0:0,0,0	0/1:14,0:11:0.21:0,0,0	1/1:10,2:10:0.66:8,1,0	1/1:11,6:16:2.66:44,3,0	./.	0/1:7,0:7:0:0,0,0	0/1:18,0:16:45.96:46,0,58	1/1:6,0:5:2.22:7,2,0	1/1:3,0:3:2.94:16,3,0
chr10	43199756	.	AGT	A	46.89	PASS	AB=0.952;AC=7;AF=0.194;AN=36;BaseQRankSum=1.891;DP=399;FS=2.069;HRun=0;HaplotypeScore=78.7235;InbreedingCoeff=0.3031;MQ=56.58;MQ0=32;MQRankSum=1.157;QD=1.04;ReadPosRankSum=1.269;VQSLOD=1.3505;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	0/0:10,0:10:0.78:0,1,3	0/0:56,0:7:11.12:0,11,150	0/0:87,0:18:8.04:0,8,154	./.	./.	0/0:15,0:14:2.68:0,3,11	0/0:18,0:15:6.93:0,7,104	0/1:7,0:6:0:0,0,1	0/0:8,0:6:12.26:0,12,77	./.	0/0:15,0:15:7.93:0,8,85	0/0:10,0:8:8.95:0,9,43	0/0:8,0:8:2.74:0,3,12	./.	0/0:8,0:7:5.81:0,6,49	./.	1/1:1,0:1:2.99:24,3,0	0/0:12,0:9:1.29:0,1,34	./.	./.	0/0:15,0:12:1.76:0,2,5	0/1:16,0:15:0.18:1,0,0	./.	./.	0/1:15,3:14:60.69:61,0,113	0/0:5,0:5:2.84:0,3,14	1/1:3,0:3:8.86:59,9,0
chr10	43200751	.	GT	G	11074.21	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=13.163;DP=741;FS=1.632;HRun=7;HaplotypeScore=75.9467;InbreedingCoeff=0.9864;MQ=74.17;MQ0=0;MQRankSum=-0.472;QD=24.94;ReadPosRankSum=2.677;VQSLOD=5.5558;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,30:34:69.16:704,69,0	1/1:1,10:11:27.06:275,27,0	0/0:22,0:22:54.01:0,54,627	0/0:21,0:20:8.46:0,8,350	1/1:2,23:25:66.14:672,66,0	0/0:33,0:33:93.30:0,93,1169	0/0:20,0:20:48.13:0,48,585	1/1:9,27:36:84.15:843,84,0	0/0:38,0:38:99:0,111,1348	1/1:2,33:35:99:1007,99,0	1/1:1,29:30:81.18:825,81,0	0/0:26,0:26:63.17:0,63,766	0/0:35,0:35:90.25:0,90,1094	0/0:19,0:19:51.15:0,51,627	1/1:4,23:27:60.14:612,60,0	1/1:1,27:28:72.16:735,72,0	0/0:16,0:16:45.14:0,45,562	1/1:2,28:30:66.15:673,66,0	1/1:2,16:18:46.32:485,46,0	1/1:3,26:29:63.13:639,63,0	1/1:1,26:27:72.16:734,72,0	0/0:31,0:31:84.26:0,84,1041	0/0:15,0:15:42.13:0,42,528	0/0:21,0:21:60.19:0,60,754	1/1:1,27:28:66.15:673,66,0	1/1:2,33:35:96.19:969,96,0	1/1:1,35:36:87.05:887,87,0	1/1:2,13:15:12.02:340,12,0
chr10	43201294	.	C	CGTGT	19481.28	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-17.362;DP=807;FS=2.401;HRun=0;HaplotypeScore=129.6451;InbreedingCoeff=0.9928;MQ=62.24;MQ0=0;MQRankSum=-4.283;QD=54.11;ReadPosRankSum=-0.307;VQSLOD=6.0928;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,111,2012	0/0:13,0:13:30.06:0,30,517	0/0:19,0:14:18.05:0,18,307	0/0:19,0:17:11.51:0,12,201	0/0:31,0:31:81.25:0,81,1477	0/0:35,0:35:99:0,99,1804	0/0:30,0:30:87.30:0,87,1605	1/1:12,18:32:81.23:1819,81,0	0/0:35,0:35:99:0,102,1872	1/1:7,25:35:93.31:2262,93,0	1/1:6,18:25:30.10:800,30,0	0/0:31,0:31:90.31:0,90,1664	0/0:19,0:19:45.12:0,45,797	0/0:27,0:27:78.25:0,78,1424	1/1:9,29:38:78.27:2080,78,0	0/0:26,0:26:75.24:0,75,1368	0/0:34,0:34:96.22:0,96,1635	1/1:2,25:28:63.22:1677,63,0	1/1:4,21:26:75.23:1822,75,0	1/1:5,28:36:66.23:1747,66,0	1/1:7,33:42:68.93:1838,69,0	0/0:22,0:22:63.22:0,63,1161	0/0:29,0:29:81.28:0,81,1512	0/0:37,0:37:99:0,105,1855	1/1:8,19:28:45.15:1199,45,0	1/1:4,29:35:99:2400,105,0	1/1:5,18:25:51.18:1358,51,0	1/1:2,6:8:18.06:480,18,0
chr10	43201790	.	GCA	G	4208.63	PASS	AB=0.851;AC=23;AF=0.411;AN=56;BaseQRankSum=1.608;DP=673;FS=2.233;HRun=0;HaplotypeScore=111.1698;InbreedingCoeff=0.6229;MQ=67.72;MQ0=12;MQRankSum=1.775;QD=12.95;ReadPosRankSum=0.577;VQSLOD=3.7053;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:45:31.58:0,32,290	0/0:6,0:11:15.01:0,15,149	0/0:34,0:18:6:0,6,64	0/0:39,0:22:6.16:0,6,129	1/1:7,0:22:36.93:182,37,0	0/1:7,23:32:16.04:685,0,16	1/1:7,13:22:38.57:389,39,0	0/1:29,4:32:99:108,0,612	1/1:7,13:21:32.93:362,33,0	0/0:11,0:25:60.02:0,60,578	0/0:10,0:23:33:0,33,310	1/1:10,12:22:32.76:341,33,0	1/1:5,11:16:33.10:383,33,0	1/1:9,12:23:47.81:515,48,0	0/0:11,0:29:57.01:0,57,541	0/0:10,0:20:35.08:0,35,279	0/1:29,3:32:26.24:26,0,986	0/0:4,0:17:18.12:0,18,292	0/0:15,0:14:6.90:0,7,369	0/0:18,0:18:36.12:0,36,562	0/1:27,1:29:3.22:3,0,653	1/1:4,13:19:35.94:397,36,0	1/1:5,15:20:42.12:488,42,0	1/1:3,15:20:32.59:321,33,0	0/0:13,0:26:36.01:0,36,353	0/0:7,0:23:57.51:0,58,571	0/0:21,0:21:42.09:0,42,587	0/1:11,1:12:7.74:8,0,343
chr10	43202717	.	TTTTG	T	4431.58	PASS	AB=1.000;AC=35;AF=0.625;AN=56;BaseQRankSum=1.318;DP=619;FS=2.168;HRun=0;HaplotypeScore=140.6529;InbreedingCoeff=0.6600;MQ=65.67;MQ0=5;MQRankSum=-0.331;QD=11.57;ReadPosRankSum=1.929;VQSLOD=4.1797;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:84.29:0,84,1885	0/0:10,0:10:11.99:0,12,231	0/0:26,0:22:9.03:0,9,173	0/0:36,0:29:22.07:0,22,446	0/1:19,0:25:9.09:9,0,368	0/0:8,0:29:51.09:0,51,807	0/0:10,0:17:20.99:0,21,305	1/1:23,6:28:18.04:238,18,0	0/0:15,0:28:21.07:0,21,335	1/1:26,0:26:5.87:277,6,0	0/1:12,0:12:19.93:116,0,20	1/1:15,0:15:14.05:117,14,0	1/1:12,0:12:6.01:56,6,0	1/1:10,0:10:10.83:89,11,0	1/1:21,0:21:20.99:223,21,0	0/0:18,0:18:30.10:0,30,703	0/0:29,0:29:45.07:0,45,891	1/1:22,0:22:48.13:546,48,0	1/1:23,3:26:10.14:185,10,0	1/1:13,8:21:30.07:447,30,0	1/1:13,30:43:69.18:1040,69,0	1/1:12,0:12:4.82:33,5,0	1/1:17,0:17:3.59:10,4,0	1/1:17,0:17:6.01:56,6,0	1/1:25,0:25:27.06:292,27,0	0/1:28,0:28:10.54:318,0,11	1/1:4,11:15:17.79:285,18,0	1/1:5,2:7:6.02:95,6,0
chr10	43202736	.	TGTTTGTTTGTTTGTTTGTTG	T	2575.96	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=5.149;DP=650;FS=38.162;HRun=0;HaplotypeScore=308.4058;InbreedingCoeff=0.8461;MQ=50.33;MQ0=7;MQRankSum=-2.508;QD=28.94;ReadPosRankSum=-0.636;VQSLOD=1.5775;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,128,8649	0/0:10,0:10:24.08:0,24,1535	0/0:23,0:12:24.08:0,24,1229	0/0:30,0:16:39.13:0,39,2261	0/0:26,0:25:60.21:0,60,4061	0/0:29,0:28:66.17:0,66,4435	0/0:23,0:23:60.21:0,60,3279	0/0:34,0:27:66.22:0,66,2908	0/0:30,0:30:54.19:0,54,2722	0/0:28,0:28:17.62:0,18,2539	0/0:18,0:18:1.95:0,2,1419	1/1:2,14:16:15.05:803,15,0	1/1:2,8:10:6.02:331,6,0	1/1:2,10:12:12.04:638,12,0	0/0:23,0:23:30.10:0,30,1420	0/0:19,0:19:54.03:0,54,3278	0/0:27,0:27:69.19:0,69,4845	0/0:24,0:24:54.15:0,54,2841	0/0:23,0:19:39.13:0,39,1607	0/0:27,0:27:63.18:0,63,3124	0/0:42,0:42:96.30:0,96,5140	1/1:3,11:14:14.92:365,15,0	1/1:6,9:15:4.49:276,4,0	1/1:6,16:22:2.11:325,2,0	0/0:28,0:28:20.13:0,20,1788	0/0:25,0:25:69.24:0,69,3284	0/0:18,0:18:39.60:0,40,1721	0/0:6,0:6:18.04:0,18,987
chr10	43202752	.	TGTTG	T	5900.34	PASS	AB=1.000;AC=34;AF=0.607;AN=56;BaseQRankSum=6.632;DP=622;FS=4.159;HRun=0;HaplotypeScore=126.1090;InbreedingCoeff=0.2052;MQ=51.42;MQ0=9;MQRankSum=0.258;QD=12.66;ReadPosRankSum=3.657;VQSLOD=4.3567;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:42,0:42:99:155,0,1124	0/1:9,0:9:99:105,0,107	0/0:25,0:13:32.08:0,32,338	0/0:33,0:17:45.03:0,45,526	0/1:26,0:25:68.42:68,0,635	0/0:26,0:25:53.96:0,54,838	0/0:22,0:22:56.96:0,57,706	0/1:35,0:28:15.11:15,0,476	0/0:21,0:21:44.86:0,45,543	1/1:1,28:29:77.98:964,78,0	1/1:0,18:18:38.72:403,39,0	1/1:14,0:14:14.53:141,15,0	1/1:8,0:8:6.02:66,6,0	1/1:10,0:10:11.52:108,12,0	1/1:1,20:21:21.07:374,21,0	0/1:20,0:20:99:164,0,421	0/0:29,0:29:75.02:0,75,1251	1/1:0,26:26:48.16:905,48,0	0/1:20,0:14:48.10:48,0,202	0/1:25,0:25:99:176,0,175	0/1:43,0:43:99:369,0,214	1/1:11,0:11:14.28:101,14,0	1/1:9,0:9:5.06:16,5,0	1/1:16,0:16:6.02:66,6,0	1/1:2,27:29:30.05:528,30,0	1/1:2,25:27:72.04:961,72,0	0/1:22,0:22:99:113,0,185	0/1:6,0:6:52.39:52,0,56
chr10	43203177	.	A	AGTTT	17910.44	PASS	AB=0.534;AC=29;AF=0.518;AN=56;BaseQRankSum=-5.802;DP=627;FS=2.988;HRun=0;HaplotypeScore=109.6199;InbreedingCoeff=0.9179;MQ=82.37;MQ0=0;MQRankSum=-7.425;QD=58.34;ReadPosRankSum=2.637;VQSLOD=6.6517;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:4,0:31:6.09:469,0,6	1/1:1,0:7:20.98:185,21,0	0/0:24,0:24:61.09:0,61,1079	0/0:17,0:18:28.83:0,29,620	0/0:13,0:13:39.13:0,39,756	0/0:15,0:15:42.14:0,42,814	0/0:26,0:26:78.27:0,78,1503	0/0:31,0:31:87.28:0,87,1586	0/0:26,0:26:78.27:0,78,1495	1/1:2,16:19:54.17:1375,54,0	1/1:5,8:13:35.99:618,36,0	1/1:3,32:36:96.29:2521,96,0	1/1:6,18:24:63.22:1680,63,0	1/1:1,22:24:60.16:1538,60,0	1/1:2,10:12:33.11:820,33,0	1/1:3,0:23:39.73:429,40,0	0/0:32,0:32:96.31:0,96,1776	1/1:2,19:21:57.15:1497,57,0	0/0:19,0:19:54.19:0,54,1047	0/0:27,0:27:75.26:0,75,1451	0/0:57,0:57:99:0,172,3304	1/1:1,12:14:42.06:898,42,0	1/1:3,17:20:60.12:1348,60,0	1/1:1,18:20:51.18:1397,51,0	1/1:4,10:14:39.05:901,39,0	1/1:2,26:29:84.25:2235,84,0	0/0:31,0:30:87.30:0,87,1677	0/0:1,0:1:3.01:0,3,58
chr10	43203615	.	AAC	A	6663.51	PASS	AB=1.000;AC=32;AF=0.571;AN=56;BaseQRankSum=2.196;DP=529;FS=4.270;HRun=0;HaplotypeScore=103.6265;InbreedingCoeff=0.8899;MQ=73.96;MQ0=0;MQRankSum=-3.389;QD=22.14;ReadPosRankSum=1.861;VQSLOD=5.5480;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:75.11:0,75,423	0/0:13,0:13:31.98:0,32,198	0/0:22,0:21:40.05:0,40,484	0/0:16,0:15:20.97:0,21,260	0/1:12,0:12:3.90:88,0,4	1/1:3,14:17:36.07:479,36,0	1/1:5,17:22:42.05:543,42,0	0/0:19,0:19:43.84:0,44,274	1/1:8,2:10:24.04:298,24,0	1/1:7,17:24:57.06:698,57,0	1/1:8,5:13:30.07:357,30,0	1/1:17,0:19:50.39:408,50,0	1/1:20,0:25:53.88:451,54,0	1/1:20,0:20:47.83:397,48,0	1/1:9,9:18:24.08:332,24,0	0/1:12,0:12:4.55:5,0,108	0/0:29,0:29:68.67:0,69,364	1/1:3,8:11:26.95:335,27,0	0/0:18,0:18:46.30:0,46,319	0/0:29,0:29:57.33:0,57,410	0/0:17,0:17:46.51:0,47,264	1/1:21,0:21:50.98:443,51,0	1/1:18,0:21:61.12:502,61,0	1/1:22,0:22:47.99:415,48,0	1/1:6,6:12:27.08:362,27,0	1/1:9,13:22:51.03:551,51,0	0/0:23,0:23:49.22:0,49,297	0/0:8,0:8:14.25:0,14,101
chr10	43203618	.	ACACC	A	6164.39	PASS	AB=0.952;AC=17;AF=0.304;AN=56;BaseQRankSum=-9.804;DP=508;FS=0.796;HRun=0;HaplotypeScore=121.2658;InbreedingCoeff=0.4989;MQ=74.41;MQ0=0;MQRankSum=-5.174;QD=28.81;ReadPosRankSum=2.361;VQSLOD=4.9689;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:81.14:0,81,1019	0/0:12,0:12:33.11:0,33,488	0/0:21,0:20:49.27:0,49,828	0/0:14,0:13:31.44:0,31,408	0/1:12,0:12:53.31:53,0,134	0/0:16,0:16:6.03:0,6,43	0/1:22,0:22:9.41:9,0,38	0/0:18,0:18:45.14:0,45,610	0/0:10,0:10:14.73:0,15,47	0/1:24,0:24:42.19:42,0,105	0/1:10,0:12:35.12:35,0,43	1/1:4,15:19:51.13:940,51,0	1/1:6,18:24:54.19:1047,54,0	1/1:0,20:20:48.12:898,48,0	0/0:16,0:16:19.63:0,20,68	0/0:13,0:13:10.29:0,10,397	0/0:27,0:27:72.20:0,72,979	0/0:11,0:12:0.17:0,0,25	0/0:16,0:16:48.15:0,48,691	0/0:28,0:28:75.17:0,75,1041	0/0:19,0:19:51:0,51,643	1/1:0,19:19:51.18:1011,51,0	1/1:7,14:21:61.42:1066,61,0	1/1:1,21:22:48.16:950,48,0	0/0:10,0:11:1.20:0,1,27	0/1:17,0:19:27.33:113,0,27	0/0:21,0:21:51.08:0,51,617	0/0:8,0:8:24.04:0,24,316
chr10	43203619	.	CA	C	4673.33	PASS	AB=0.977;AC=44;AF=0.786;AN=56;BaseQRankSum=5.945;DP=510;FS=7.300;HRun=1;HaplotypeScore=101.8968;InbreedingCoeff=0.3589;MQ=73.71;MQ0=0;MQRankSum=-4.603;QD=10.23;ReadPosRankSum=9.178;VQSLOD=1.9454;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:30,2:32:83.24:120,0,83	0/1:12,0:12:10.94:19,0,11	0/0:22,0:20:35.53:0,36,473	0/0:14,0:13:13.35:0,13,254	1/1:11,0:11:18:179,18,0	1/1:14,2:16:35.13:209,35,0	1/1:18,4:22:41.08:252,41,0	0/0:17,0:17:9.77:0,10,88	1/1:8,3:11:22.12:134,22,0	1/1:21,4:25:30.62:316,31,0	1/1:10,2:12:33.23:209,33,0	1/1:18,0:18:48.40:311,48,0	1/1:23,0:23:52.69:341,53,0	1/1:20,0:20:46.98:307,47,0	1/1:11,6:17:26:156,26,0	1/1:12,2:14:10.29:96,10,0	1/1:24,2:26:12.26:105,12,0	1/1:11,1:12:26.66:155,27,0	0/1:17,0:17:5.84:6,0,96	0/1:27,1:28:70.58:71,0,72	0/1:19,0:19:25.73:26,0,37	1/1:19,0:19:50.42:341,50,0	1/1:22,0:22:62.95:412,63,0	1/1:21,0:21:47.45:319,47,0	1/1:8,4:12:8.71:140,9,0	1/1:16,3:19:30.59:322,31,0	0/1:20,1:21:52.25:52,0,83	1/1:8,0:8:15.24:76,15,0
chr10	43203620	.	AC	A	4431.91	PASS	AB=1.000;AC=41;AF=0.732;AN=56;BaseQRankSum=0.366;DP=512;FS=3.234;HRun=10;HaplotypeScore=103.4418;InbreedingCoeff=0.4634;MQ=75.47;MQ0=0;MQRankSum=-4.512;QD=10.73;ReadPosRankSum=7.960;VQSLOD=3.5394;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,23:31:62.98:546,63,0	1/1:1,11:12:29.98:260,30,0	0/0:22,0:21:30.14:0,30,279	0/1:15,0:14:24.28:24,0,156	0/1:10,0:10:8.83:9,0,25	1/1:16,0:16:0.47:4,0,0	0/0:24,0:24:2.55:0,3,43	1/1:3,13:16:35.99:312,36,0	0/0:11,0:11:7.16:0,7,52	0/0:25,0:25:5.34:0,5,73	1/1:13,0:13:8.12:48,8,0	1/1:18,0:18:34.18:103,34,0	1/1:23,0:23:37.35:114,37,0	1/1:20,0:20:33.11:101,33,0	0/0:17,0:17:1.23:0,1,21	1/1:3,10:14:32.02:266,32,0	1/1:3,23:26:68.98:599,69,0	0/1:12,0:12:2.18:7,0,2	1/1:2,15:17:38.95:334,39,0	1/1:6,21:28:59:500,59,0	1/1:3,16:19:41.99:364,42,0	1/1:19,0:19:37.74:116,38,0	1/1:22,0:22:15.83:84,16,0	1/1:21,0:21:35.34:108,35,0	0/1:12,0:12:6.93:7,0,27	0/1:20,0:20:8.92:9,0,47	1/1:6,15:21:35.99:312,36,0	1/1:1,7:8:23.97:203,24,0
chr10	43206070	.	TTGTGTGTGTG	T	2591.71	PASS	AB=0.769;AC=24;AF=0.480;AN=50;BaseQRankSum=4.382;DP=581;FS=1.560;HRun=0;HaplotypeScore=172.7296;InbreedingCoeff=0.5337;MQ=64.35;MQ0=19;MQRankSum=-6.050;QD=9.13;ReadPosRankSum=-0.320;VQSLOD=2.6757;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	1/1:6,0:9:6.02:140,6,0	./.	./.	0/0:22,0:28:33.10:0,33,560	0/0:16,0:20:18.53:0,19,435	0/0:12,0:11:18.06:0,18,373	1/1:26,0:26:5.22:43,5,0	0/0:6,0:13:18.06:0,18,422	0/0:20,0:25:40.02:0,40,602	0/0:15,0:15:15.04:0,15,204	0/1:14,2:15:17.74:21,0,18	1/1:8,8:16:6.02:178,6,0	1/1:9,10:20:14.59:260,15,0	0/0:13,0:22:18.06:0,18,271	0/1:7,0:29:91.96:853,0,92	0/0:15,0:16:30.10:0,30,1033	0/0:11,0:16:15.05:0,15,231	1/1:19,4:21:10.16:218,10,0	1/1:13,10:23:8.90:162,9,0	0/1:28,0:27:28.73:29,0,41	1/1:13,7:20:3.35:37,3,0	1/1:11,3:14:6.02:140,6,0	1/1:18,7:25:3.01:89,3,0	0/0:14,0:25:27.08:0,27,416	0/0:13,0:13:20.18:0,20,238	0/1:10,11:20:1.99:511,0,2	1/1:9,3:12:3.01:89,3,0
chr10	43206294	.	AT	A	1480.18	PASS	AB=1.000;AC=25;AF=0.446;AN=56;BaseQRankSum=14.491;DP=635;FS=7.121;HRun=1;HaplotypeScore=133.4051;InbreedingCoeff=0.6337;MQ=74.31;MQ0=5;MQRankSum=-2.450;QD=4.57;ReadPosRankSum=6.094;VQSLOD=0.4596;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:29,1:30:18.61:207,19,0	1/1:9,0:9:19.41:58,19,0	0/0:39,0:35:86.11:0,86,1256	0/0:25,0:18:48.16:0,48,663	0/0:22,0:22:46.03:0,46,332	0/0:20,0:20:50.72:0,51,398	0/0:27,0:27:74.86:0,75,618	0/1:27,0:27:11.30:11,0,150	0/0:19,0:19:44.92:0,45,365	1/1:11,0:11:20.24:65,20,0	1/1:17,1:18:4.87:156,5,0	0/0:33,0:33:77.75:0,78,642	0/0:22,0:21:47.87:0,48,383	0/0:27,0:27:77.86:0,78,629	1/1:26,0:26:30.76:152,31,0	0/1:27,0:27:9.73:109,0,10	0/0:21,0:21:63.14:0,63,944	1/1:18,0:18:19.79:99,20,0	0/1:18,0:15:40.71:47,0,41	1/1:14,0:14:28.35:122,28,0	1/1:39,2:41:13.90:176,14,0	0/0:15,0:15:38.95:0,39,339	0/0:19,0:19:35.33:0,35,261	0/0:22,0:22:59.88:0,60,492	0/1:15,0:15:15.12:70,0,15	1/1:26,0:26:47.75:164,48,0	1/1:38,0:36:20.72:240,21,0	0/1:6,0:6:11.08:18,0,11
chr10	43206295	.	TC	T	8166.44	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-8.508;DP=639;FS=9.867;HRun=7;HaplotypeScore=109.9121;InbreedingCoeff=0.9974;MQ=73.58;MQ0=5;MQRankSum=-1.830;QD=25.44;ReadPosRankSum=2.786;VQSLOD=4.2819;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,27:29:72.16:733,72,0	1/1:0,9:9:27.06:275,27,0	0/0:39,0:35:71.52:0,72,847	0/0:26,0:19:33.04:0,33,404	0/0:2,0:22:48.72:0,49,260	0/0:3,0:23:45.49:0,45,232	0/0:6,0:27:59.96:0,60,322	1/1:10,18:28:54.08:538,54,0	0/0:0,0:19:42.68:0,43,218	1/1:0,11:11:33.08:337,33,0	1/1:3,15:18:45.09:457,45,0	0/0:5,0:35:71.32:0,71,382	0/0:6,0:21:31.25:0,31,159	0/0:0,0:27:73.89:0,74,377	1/1:0,25:25:69.16:704,69,0	1/1:3,23:26:66.15:673,66,0	0/0:21,0:21:57.18:0,57,717	1/1:1,17:18:45.10:459,45,0	1/1:5,13:15:36.07:365,36,0	1/1:0,14:14:36.08:367,36,0	1/1:7,36:43:99:996,99,0	0/0:1,0:15:37.13:0,37,212	0/0:4,0:19:28.51:0,29,149	0/0:4,0:23:54.04:0,54,285	1/1:1,13:14:36.08:367,36,0	1/1:0,25:25:75.17:764,75,0	1/1:2,35:37:96.22:978,96,0	1/1:1,5:6:15.03:153,15,0
chr10	43206730	.	GCTAGGTACCAGC	G	26351.71	PASS	AB=0.552;AC=29;AF=0.518;AN=56;BaseQRankSum=18.262;DP=619;FS=1.397;HRun=0;HaplotypeScore=239.5954;InbreedingCoeff=0.9240;MQ=54.11;MQ0=4;MQRankSum=-17.713;QD=82.61;ReadPosRankSum=3.076;VQSLOD=4.6148;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,25:28:48.16:1824,48,0	1/1:4,14:18:42.14:1534,42,0	0/0:16,0:16:38.92:0,39,1537	0/0:12,0:12:30.10:0,30,1564	0/0:29,0:29:84.27:0,84,4640	0/0:24,0:24:66.23:0,66,3693	0/0:17,0:17:48.16:0,48,2764	1/1:11,18:29:54.18:1973,54,0	0/0:37,0:37:99:0,105,6354	1/1:1,23:24:69.21:2373,69,0	1/1:1,18:19:45.15:1710,45,0	0/0:19,0:19:57.20:0,57,3184	0/0:23,0:23:69.24:0,69,3854	0/0:27,0:27:78.27:0,78,4673	1/1:1,18:19:45.15:1687,45,0	1/1:2,31:33:81.28:3077,81,0	0/0:28,0:28:81.28:0,81,4749	0/1:3,13:16:44:1250,0,44	1/1:13,6:14:18.06:684,18,0	1/1:2,17:19:51.18:1938,51,0	1/1:4,10:14:18.06:658,18,0	0/0:28,0:28:84.26:0,84,4748	0/0:23,0:23:66.23:0,66,3936	0/0:17,0:17:42.14:0,42,2468	1/1:1,24:25:66.23:2485,66,0	1/1:2,22:24:66.22:2309,66,0	1/1:2,24:26:60.21:2280,60,0	1/1:0,5:5:15.05:570,15,0
chr10	43207195	.	TGTGTGTGTGA	T	1234.53	PASS	AB=1.000;AC=28;AF=0.609;AN=46;BaseQRankSum=4.117;DP=697;FS=14.756;HRun=0;HaplotypeScore=183.1943;InbreedingCoeff=0.5836;MQ=50.87;MQ0=25;MQRankSum=-5.609;QD=3.57;ReadPosRankSum=2.625;VQSLOD=2.0874;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	1/1:12,0:12:1:35,1,0	./.	./.	1/1:9,7:15:3.01:40,3,0	./.	1/1:22,0:20:8.97:84,9,0	0/1:38,0:24:0:0,0,0	1/1:28,1:17:18.06:306,18,0	0/1:18,0:17:23.99:24,0,97	1/1:17,0:16:8.44:40,8,0	0/0:38,0:31:30.40:0,30,861	0/0:33,0:23:27.05:0,27,921	0/0:29,0:23:23.99:0,24,681	1/1:21,0:16:17.11:88,17,0	0/1:13,0:9:24.89:25,0,325	0/0:39,0:37:48.09:0,48,1454	1/1:14,0:22:3.01:67,3,0	1/1:21,0:15:9.03:175,9,0	1/1:24,0:23:8.99:137,9,0	0/1:33,0:26:0:0,0,0	0/0:29,0:29:20.63:0,21,581	0/0:23,0:23:18.02:0,18,420	0/0:49,0:46:45.13:0,45,1479	./.	1/1:31,0:27:14.71:154,15,0	1/1:20,0:18:15.04:204,15,0	1/1:8,0:7:2.98:21,3,0
chr10	43207225	.	AGTGTGTGTGAGT	A	2731.63	PASS	AB=0.886;AC=24;AF=0.462;AN=52;BaseQRankSum=1.111;DP=581;FS=7.058;HRun=0;HaplotypeScore=169.9835;InbreedingCoeff=0.4325;MQ=37.49;MQ0=77;MQRankSum=-6.883;QD=9.26;ReadPosRankSum=-2.527;VQSLOD=1.5269;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:28:13.38:13,0,48	0/1:8,0:9:4.90:45,0,5	./.	./.	0/0:16,0:12:8.75:0,9,85	0/0:8,0:7:3.01:0,3,46	0/0:25,0:19:11.28:0,11,119	1/1:32,0:16:29.98:349,30,0	0/1:20,0:15:24.62:25,0,100	0/1:14,0:13:99:117,0,325	1/1:9,0:11:15.05:238,15,0	0/0:34,0:26:52.80:0,53,1627	0/0:31,0:22:45.11:0,45,1512	0/0:25,0:21:32.77:0,33,1227	0/1:11,0:15:25.64:341,0,26	0/0:10,0:9:18.27:0,18,473	0/0:36,0:32:59.67:0,60,2326	1/1:15,0:12:3.01:79,3,0	1/1:10,2:7:21.07:474,21,0	1/1:8,14:20:7.51:254,8,0	1/1:35,0:25:11.36:129,11,0	0/0:30,0:30:27.56:0,28,938	0/0:17,0:17:21.20:0,21,725	0/0:44,0:39:50.57:0,51,2228	1/1:11,0:9:3.01:36,3,0	0/1:18,0:18:99:294,0,283	1/1:7,14:16:14.86:403,15,0	1/1:15,0:10:8.99:117,9,0
chr10	43207235	.	AGT	A	1592.03	PASS	AB=0.978;AC=31;AF=0.646;AN=48;BaseQRankSum=2.142;DP=545;FS=20.983;HRun=0;HaplotypeScore=123.7865;InbreedingCoeff=0.5487;MQ=35.57;MQ0=87;MQRankSum=-3.212;QD=5.24;ReadPosRankSum=-2.546;VQSLOD=0.8623;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:24,1:24:2.10:23,2,0	1/1:4,3:7:8.99:96,9,0	./.	./.	1/1:16,0:11:3.01:40,3,0	./.	1/1:23,0:17:8.97:84,9,0	1/1:15,10:12:30.08:373,30,0	1/1:16,2:14:17.73:210,18,0	0/1:13,1:12:11.83:12,0,327	1/1:10,1:9:8.44:40,8,0	0/0:33,0:26:39.60:0,40,667	0/0:26,0:17:36.05:0,36,577	0/0:22,0:18:27:0,27,421	0/1:15,0:14:29.60:68,0,30	1/1:1,9:10:15.05:200,15,0	0/0:35,0:30:50.63:0,51,783	1/1:14,0:10:2.37:8,2,0	1/1:14,3:10:27:299,27,0	1/1:18,1:17:7.47:85,7,0	1/1:10,22:26:3.01:40,3,0	0/0:30,0:30:21.46:0,21,320	0/0:20,0:20:17.86:0,18,262	0/0:39,0:35:45.13:0,45,741	./.	0/1:23,0:17:15.41:15,0,368	1/1:17,4:15:14.92:154,15,0	1/1:3,9:8:2.98:21,3,0
chr10	43207237	.	T	TGTGTGA	1015.89	PASS	AB=1.000;AC=27;AF=0.563;AN=48;BaseQRankSum=2.479;DP=537;FS=11.831;HRun=0;HaplotypeScore=143.2671;InbreedingCoeff=0.2257;MQ=35.32;MQ0=85;MQRankSum=-4.354;QD=3.46;ReadPosRankSum=-4.540;VQSLOD=0.0562;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,23:24:1.76:78,2,0	1/1:8,1:8:8.99:133,9,0	./.	./.	1/1:16,0:11:3.01:40,3,0	./.	1/1:21,0:15:7.25:82,7,0	1/1:21,0:12:17.84:158,18,0	1/1:15,0:12:8.10:189,8,0	0/1:14,0:12:47.26:47,0,394	1/1:11,0:9:8.38:40,8,0	0/0:35,0:28:39.37:0,39,802	0/0:26,0:17:36.08:0,36,714	0/0:23,0:19:27.09:0,27,524	0/1:15,0:14:44.40:68,0,44	0/1:10,0:10:25.35:25,0,128	0/0:34,0:29:50.63:0,51,951	1/1:14,0:10:2.96:19,3,0	0/1:16,0:9:33.21:63,0,33	0/1:19,0:17:14.35:59,0,14	1/1:33,0:25:0.14:1,0,0	0/0:31,0:31:22:0,22,372	0/0:20,0:20:17.56:0,18,296	0/0:38,0:34:46.08:0,46,910	./.	0/1:22,0:16:36.09:36,0,350	0/1:22,0:15:23.54:119,0,24	1/1:11,0:7:2.98:21,3,0
chr10	43207241	.	TGTGA	T	97.38	PASS	AB=0.972;AC=15;AF=0.313;AN=48;BaseQRankSum=4.354;DP=536;FS=1.314;HRun=0;HaplotypeScore=139.6920;InbreedingCoeff=0.4604;MQ=34.20;MQ0=92;MQRankSum=-2.919;QD=0.63;ReadPosRankSum=-0.631;VQSLOD=1.9553;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:21:0.92:5,1,0	0/1:10,1:8:9.61:10,0,27	./.	./.	0/0:14,0:9:2.74:0,3,12	./.	1/1:22,0:16:2.66:15,3,0	0/0:20,0:10:29.60:0,30,202	0/1:15,0:12:14.63:33,0,15	0/0:14,0:12:20.10:0,20,511	0/0:10,0:7:0:0,0,0	0/0:31,1:27:45.45:0,45,899	0/0:27,0:18:36.05:0,36,822	0/0:20,1:18:23.98:0,24,548	0/0:15,0:14:3.01:0,3,66	0/0:9,0:9:14.69:0,15,89	0/0:33,0:28:50.94:0,51,1004	1/1:14,0:10:2.96:19,3,0	0/1:16,0:10:1.63:2,0,147	1/1:18,0:17:6.71:45,7,0	0/0:30,0:23:2.88:0,3,18	0/0:30,1:31:20.91:0,21,343	0/0:19,1:20:14.95:0,15,282	0/0:40,0:36:42.06:0,42,970	./.	0/0:23,0:16:19.73:0,20,571	1/1:23,0:15:14.29:90,14,0	1/1:12,0:7:2.97:20,3,0
chr10	43207242	.	G	GAA	269.90	PASS	AB=0.855;AC=9;AF=0.188;AN=48;BaseQRankSum=2.894;DP=540;FS=6.927;HRun=0;HaplotypeScore=132.1139;InbreedingCoeff=0.3142;MQ=33.94;MQ0=98;MQRankSum=-2.927;QD=2.75;ReadPosRankSum=-3.898;VQSLOD=0.3831;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:20:3.84:0,4,20	0/0:11,0:8:6.77:0,7,52	./.	./.	0/0:14,0:9:2.74:0,3,12	./.	1/1:21,0:14:8.57:60,9,0	0/0:18,0:10:29.49:0,29,194	0/0:14,0:12:1.11:0,1,52	0/1:15,0:12:44.41:44,0,351	1/1:8,3:8:8.91:41,9,0	0/0:32,0:27:39.56:0,40,635	0/0:27,0:18:39.09:0,39,593	0/0:21,0:18:26.79:0,27,437	0/1:10,5:14:28.69:68,0,29	0/0:9,0:9:14.34:0,14,85	0/0:33,0:28:53.70:0,54,850	1/1:14,0:10:3.01:36,3,0	0/0:16,0:10:29.32:0,29,212	0/0:20,0:17:8.75:0,9,54	0/0:30,0:23:2.39:0,2,16	0/0:32,0:32:21.89:0,22,343	0/0:20,0:20:17.40:0,17,262	0/0:40,0:36:45.08:0,45,708	./.	0/1:17,5:15:99:153,0,289	0/0:23,0:15:14.65:0,15,93	0/0:12,0:7:2.96:0,3,19
chr10	43207261	.	AAT	A	904.48	PASS	AB=0.975;AC=15;AF=0.313;AN=48;BaseQRankSum=5.225;DP=526;FS=5.959;HRun=0;HaplotypeScore=129.5427;InbreedingCoeff=0.2882;MQ=30.15;MQ0=113;MQRankSum=-1.792;QD=4.57;ReadPosRankSum=-2.715;VQSLOD=1.8722;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:15:2.78:0,3,59	0/1:12,1:8:14.32:14,0,55	./.	./.	0/0:14,1:9:3.01:0,3,53	./.	0/0:22,0:15:4.75:0,5,209	0/0:13,0:11:19.01:0,19,492	0/0:11,0:6:12.04:0,12,199	0/0:19,0:10:8.53:0,9,429	1/1:12,0:6:0.17:1,0,0	1/1:22,2:22:42.62:266,43,0	0/1:23,0:18:30.42:155,0,30	1/1:17,1:17:12.56:182,13,0	0/0:15,0:12:18.05:0,18,329	0/0:12,0:8:12.01:0,12,243	0/0:25,1:21:18.61:0,19,528	0/1:14,0:10:9.92:10,0,55	0/1:16,1:12:12.29:12,0,529	0/0:18,0:12:3.01:0,3,49	0/0:27,0:19:8.35:0,8,123	1/1:22,3:25:9.96:166,10,0	1/1:16,2:18:25.14:142,25,0	0/1:34,0:30:80.29:108,0,80	0/0:16,0:7:9.03:0,9,162	0/0:14,1:8:6.73:0,7,274	0/0:21,0:13:3.01:0,3,51	./.
chr10	43207262	.	ATG	A	2341.44	PASS	AB=1.000;AC=15;AF=0.313;AN=48;BaseQRankSum=2.872;DP=527;FS=0.000;HRun=0;HaplotypeScore=124.8005;InbreedingCoeff=0.6623;MQ=29.94;MQ0=114;MQRankSum=-0.465;QD=14.11;ReadPosRankSum=-3.183;VQSLOD=2.5483;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:15:2.98:0,3,51	0/1:13,0:8:4.38:4,0,46	./.	./.	0/0:15,0:9:3.01:0,3,51	./.	0/0:22,0:15:4.73:0,5,195	0/0:14,0:12:27.07:0,27,387	0/0:12,0:6:12.04:0,12,192	0/0:19,0:10:27.97:0,28,428	1/1:12,0:6:0.46:1,0,0	1/1:6,18:22:44.83:566,45,0	1/1:7,16:18:35.69:413,36,0	1/1:4,14:17:39.01:465,39,0	0/0:15,0:12:18.05:0,18,307	0/0:12,0:8:12.01:0,12,202	0/0:26,0:21:22.45:0,22,350	0/0:12,0:8:3.90:0,4,54	0/0:17,0:12:3.67:0,4,416	0/0:18,0:12:3.01:0,3,45	0/0:27,0:19:8.29:0,8,111	1/1:6,19:25:35.89:408,36,0	1/1:8,10:18:28.98:311,29,0	1/1:7,26:29:27.07:339,27,0	0/0:17,0:7:9.03:0,9,153	0/0:15,0:8:18.06:0,18,274	0/0:21,0:13:3.01:0,3,49	./.
chr10	43207299	.	T	TGA	1114.73	PASS	AB=0.991;AC=22;AF=0.478;AN=46;BaseQRankSum=5.282;DP=470;FS=3.947;HRun=0;HaplotypeScore=91.5230;InbreedingCoeff=0.5932;MQ=24.98;MQ0=89;MQRankSum=-3.386;QD=4.42;ReadPosRankSum=3.328;VQSLOD=2.3802;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:6:3.01:0,3,41	1/1:12,0:4:0.47:2,0,0	1/1:31,0:1:2.04:6,2,0	0/1:26,0:2:0:0,0,0	./.	./.	0/0:16,0:10:8.65:0,9,126	0/0:19,0:15:39.13:0,39,533	1/1:21,0:6:0.89:2,1,0	0/0:25,0:7:15.01:0,15,170	0/1:12,0:3:0:0,0,0	1/1:12,17:20:8.54:356,9,0	1/1:11,13:13:20.35:324,20,0	1/1:7,9:10:9.03:159,9,0	0/0:18,0:10:0:0,0,0	0/1:13,0:6:0:0,0,0	0/0:9,0:6:6.02:0,6,82	0/0:11,0:6:6.02:0,6,75	0/0:20,0:12:27.03:0,27,316	./.	0/1:15,0:8:0:1,0,0	1/1:6,11:14:12.04:212,12,0	1/1:6,8:13:5.96:105,6,0	1/1:12,9:15:6.48:83,6,0	./.	0/0:15,0:4:12.04:0,12,164	0/0:13,0:5:0:0,0,0	./.
chr10	43207332	.	G	GA	363.85	PASS	AB=0.939;AC=19;AF=0.594;AN=32;BaseQRankSum=3.309;DP=315;FS=16.344;HRun=0;HaplotypeScore=70.8129;InbreedingCoeff=0.3647;MQ=58.15;MQ0=13;MQRankSum=-2.792;QD=2.43;ReadPosRankSum=-1.864;VQSLOD=0.5291;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:6,0:1:2.97:20,3,0	./.	0/0:25,0:9:17.97:0,18,222	0/0:37,0:14:16.93:0,17,182	./.	0/0:7,0:1:0:0,0,0	./.	1/1:10,0:3:0.25:16,0,0	0/0:16,0:1:2.80:0,3,13	0/1:20,0:3:0.62:8,0,1	./.	0/1:19,2:14:0.57:46,0,1	0/1:24,3:15:6.15:110,0,6	1/1:12,0:6:8.90:60,9,0	./.	./.	./.	0/0:3,0:2:3.06:0,3,8	1/1:12,0:5:3.79:28,4,0	./.	./.	1/1:6,1:4:11.87:80,12,0	1/1:4,1:4:5.93:40,6,0	1/1:8,1:7:8.57:50,9,0	./.	1/1:14,0:3:2.96:19,3,0	./.	./.
chr10	43211112	.	GA	G	5619.96	PASS	AB=1.000;AC=33;AF=0.589;AN=56;BaseQRankSum=-2.596;DP=474;FS=2.286;HRun=10;HaplotypeScore=121.2997;InbreedingCoeff=0.9112;MQ=66.82;MQ0=0;MQRankSum=-0.576;QD=19.72;ReadPosRankSum=-0.746;VQSLOD=3.8380;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,20:21:56.98:494,57,0	1/1:2,8:10:20.98:182,21,0	0/1:9,0:8:7.01:7,0,147	0/0:14,0:14:11.60:0,12,190	1/1:2,21:23:31.95:463,32,0	0/0:21,0:21:60.16:0,60,663	0/0:11,0:11:24.06:0,24,265	1/1:2,27:29:77.96:671,78,0	0/0:13,0:13:36.06:0,36,385	1/1:3,16:19:17.84:384,18,0	1/1:1,12:13:29.97:258,30,0	0/0:20,0:20:48.09:0,48,517	0/0:22,0:23:60.12:0,60,648	0/0:11,1:12:7:0,7,292	1/1:5,25:30:28:598,28,0	1/1:0,11:11:29.99:260,30,0	0/0:20,0:20:45.07:0,45,483	1/1:0,11:11:32.99:286,33,0	1/1:2,10:12:29.98:257,30,0	1/1:4,14:18:13.69:332,14,0	1/1:5,15:21:41.98:365,42,0	0/0:25,0:25:54.11:0,54,584	0/0:12,0:12:27.07:0,27,298	0/0:18,0:18:39.10:0,39,429	1/1:3,10:13:26.98:231,27,0	1/1:4,19:23:53.98:468,54,0	1/1:4,12:16:29.99:260,30,0	1/1:1,4:5:12:104,12,0
chr10	43211516	.	CA	C	2558.63	PASS	AB=0.980;AC=50;AF=0.893;AN=56;BaseQRankSum=0.342;DP=486;FS=3.667;HRun=3;HaplotypeScore=109.3463;InbreedingCoeff=-0.1299;MQ=82.45;MQ0=0;MQRankSum=-0.943;QD=5.26;ReadPosRankSum=7.294;VQSLOD=0.2632;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:22:11.89:98,12,0	0/1:7,0:7:6.62:22,0,7	0/1:13,1:14:29.43:29,0,51	0/1:25,0:24:11.31:43,0,11	1/1:14,1:15:27.46:126,27,0	1/1:18,0:18:15.08:101,15,0	1/1:20,0:20:18.78:100,19,0	0/1:18,0:18:26.04:26,0,41	1/1:17,0:17:6.71:75,7,0	1/1:28,0:28:37.72:131,38,0	1/1:16,0:16:25.58:106,26,0	1/1:10,0:10:7.46:43,7,0	1/1:13,0:13:27.67:120,28,0	1/1:15,0:15:14.60:107,15,0	1/1:17,1:18:16.04:115,16,0	1/1:19,0:19:33.29:106,33,0	1/1:24,1:25:50.13:194,50,0	1/1:13,0:13:5.34:51,5,0	0/1:15,0:15:20.70:32,0,21	0/1:17,1:18:32.15:63,0,32	1/1:26,0:26:49.62:154,50,0	1/1:21,0:21:27:148,27,0	1/1:10,0:10:15.34:52,15,0	1/1:23,0:23:29.61:132,30,0	1/1:11,0:11:21.13:82,21,0	1/1:21,0:21:42.69:187,43,0	1/1:23,0:23:50.54:201,51,0	1/1:5,0:5:11.79:42,12,0
chr10	43211827	.	A	AGAG	9334.66	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-14.388;DP=670;FS=12.842;HRun=0;HaplotypeScore=103.4044;InbreedingCoeff=0.9972;MQ=71.69;MQ0=0;MQRankSum=-2.771;QD=41.49;ReadPosRankSum=3.078;VQSLOD=5.4585;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,108,1483	0/0:16,0:16:33.05:0,33,437	0/0:17,0:15:22.44:0,22,263	0/0:28,0:23:23.94:0,24,189	0/0:26,0:26:60.11:0,60,803	1/1:3,19:22:42.14:887,42,0	1/1:7,25:34:48.16:998,48,0	0/0:11,0:11:20.98:0,21,301	1/1:6,18:24:48.16:1012,48,0	0/0:25,0:25:57.17:0,57,813	0/0:18,0:18:42.09:0,42,523	1/1:1,25:26:57.11:1157,57,0	1/1:1,19:20:45.15:948,45,0	1/1:5,30:37:84.29:1767,84,0	0/0:27,0:27:72.24:0,72,1076	0/0:26,0:26:72.17:0,72,989	0/0:31,0:31:78.24:0,78,1137	0/0:27,0:27:69.21:0,69,1003	0/0:16,0:16:42.13:0,42,618	0/0:17,0:17:42.13:0,42,619	0/0:32,0:32:81.14:0,81,1199	1/1:5,19:24:51.17:1046,51,0	1/1:1,16:19:39.13:823,39,0	1/1:4,15:19:33.11:697,33,0	0/0:21,0:21:54.13:0,54,749	0/0:35,0:35:87.28:0,87,1285	0/0:25,0:25:72.23:0,72,1071	0/0:6,0:6:17.96:0,18,164
chr10	43212794	.	G	GAGGCGAAC	16158.33	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=-9.589;DP=465;FS=5.826;HRun=0;HaplotypeScore=126.8605;InbreedingCoeff=0.9233;MQ=89.00;MQ0=0;MQRankSum=-12.658;QD=61.21;ReadPosRankSum=-2.249;VQSLOD=3.7161;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,22:33:60.03:2051,60,0	1/1:3,2:7:15.05:620,15,0	0/0:18,0:18:14.06:0,14,821	0/0:25,0:25:60.13:0,60,1246	1/1:4,1:6:6.02:165,6,0	0/0:19,0:19:57.20:0,57,1491	0/0:15,0:15:36.11:0,36,902	1/1:21,7:30:63.22:2130,63,0	0/0:10,0:10:27.08:0,27,641	1/1:4,3:7:12.04:342,12,0	1/1:5,3:9:12.04:492,12,0	0/0:21,0:21:54.15:0,54,1336	0/0:20,0:20:48.16:0,48,1278	0/0:17,0:17:45.14:0,45,1146	1/1:5,16:21:48.16:2048,48,0	1/1:10,17:27:57.20:2425,57,0	0/0:27,0:27:72.25:0,72,1878	1/1:5,5:12:18.06:692,18,0	1/1:13,6:22:33.10:979,33,0	1/1:6,4:11:9.92:363,10,0	1/1:15,12:29:41.71:1486,42,0	0/0:3,0:3:6.02:0,6,161	0/0:8,0:8:24.04:0,24,576	0/0:18,0:18:45.15:0,45,1208	1/1:5,5:10:20.93:804,21,0	1/1:14,7:22:20.81:620,21,0	1/1:3,9:13:21.07:896,21,0	1/1:5,0:5:3.01:46,3,0
chr10	43213566	.	AG	A	315.55	PASS	AB=0.600;AC=17;AF=0.944;AN=18;BaseQRankSum=1.552;DP=41;FS=0.000;HRun=1;HaplotypeScore=30.2580;MQ=25.78;MQ0=0;MQRankSum=1.369;QD=9.28;ReadPosRankSum=1.187;VQSLOD=1.0605;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,10:9:20.95:166,21,0	./.	./.	./.	./.	1/1:0,1:1:2.99:24,3,0	./.	0/1:1,2:2:15.01:15,0,15	1/1:0,1:1:2.99:23,3,0	./.	./.	./.	./.	./.	./.	1/1:0,1:1:2.99:23,3,0	1/1:1,1:2:2.94:18,3,0	./.	1/1:1,5:5:8.92:62,9,0	./.	1/1:0,8:7:5.93:42,6,0	./.	./.	./.	./.	1/1:1,1:2:2.95:21,3,0	./.	./.
chr10	43216031	.	C	CAAA	6095.58	PASS	AB=1.000;AC=51;AF=0.911;AN=56;BaseQRankSum=2.086;DP=516;FS=11.383;HRun=16;HaplotypeScore=140.2060;InbreedingCoeff=0.5968;MQ=64.83;MQ0=2;MQRankSum=-4.231;QD=12.91;ReadPosRankSum=-2.573;VQSLOD=1.0197;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,10:19:9.70:100,10,0	1/1:3,3:5:6.02:99,6,0	0/1:23,0:12:11.94:12,0,20	0/0:22,0:18:8.50:0,8,55	1/1:22,0:22:34.75:391,35,0	1/1:19,0:18:36.62:344,37,0	1/1:8,1:14:15.05:217,15,0	1/1:18,5:28:25.18:248,25,0	1/1:14,0:14:23.92:281,24,0	1/1:24,0:22:31.92:254,32,0	1/1:31,0:30:48.37:470,48,0	1/1:16,0:13:24.91:293,25,0	1/1:3,0:13:6.02:85,6,0	1/1:6,0:6:12.02:144,12,0	1/1:13,0:13:33.16:306,33,0	1/1:12,0:10:21.54:303,22,0	0/0:21,0:21:15.80:0,16,129	1/1:17,0:17:20.50:251,20,0	1/1:15,0:23:29.42:294,29,0	1/1:29,4:33:18.01:416,18,0	1/1:13,0:13:18.50:226,19,0	1/1:11,0:11:14.85:152,15,0	1/1:11,0:19:6.02:81,6,0	1/1:7,0:6:9.42:90,9,0	1/1:25,0:25:44.37:424,44,0	1/1:21,0:20:31.34:272,31,0	1/1:11,11:23:15:214,15,0	1/1:9,4:15:11.93:130,12,0
chr10	43216625	.	A	AG	3927.60	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-12.068;DP=654;FS=2.340;HRun=5;HaplotypeScore=64.2656;InbreedingCoeff=0.9973;MQ=88.42;MQ0=0;MQRankSum=-2.911;QD=31.17;ReadPosRankSum=1.155;VQSLOD=4.3918;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:75.19:0,75,806	1/1:1,11:12:30.10:395,30,0	0/0:28,0:28:72.13:0,72,742	0/0:19,0:19:50.76:0,51,507	1/1:4,17:21:30.05:375,30,0	1/1:0,14:14:42.14:553,42,0	1/1:3,17:20:45.15:592,45,0	0/0:27,0:27:62.97:0,63,643	1/1:2,25:27:72.23:947,72,0	0/0:33,0:33:93.23:0,93,999	0/0:18,0:18:27.12:0,27,398	0/0:26,0:26:75.18:0,75,799	0/0:29,0:29:84.18:0,84,885	0/0:21,0:21:63.16:0,63,677	1/1:3,29:32:81.26:1066,81,0	0/0:19,1:20:17.66:0,18,533	0/0:19,0:19:57.09:0,57,592	0/0:14,0:14:36.09:0,36,387	0/0:25,0:25:63.14:0,63,664	0/0:21,0:21:57.14:0,57,610	0/0:43,0:43:99:0,114,1218	0/0:26,0:26:57.14:0,57,609	0/0:23,0:23:63.11:0,63,663	0/0:25,0:25:66.16:0,66,709	0/0:19,0:19:54.13:0,54,575	0/0:23,0:23:63.16:0,63,677	0/0:33,0:33:90.19:0,90,950	0/0:8,0:8:24.06:0,24,258
chr10	43218278	.	GT	G	6963.15	PASS	AB=1.000;AC=31;AF=0.554;AN=56;BaseQRankSum=-2.376;DP=604;FS=15.026;HRun=8;HaplotypeScore=87.0718;InbreedingCoeff=0.9463;MQ=74.61;MQ0=1;MQRankSum=-1.549;QD=19.95;ReadPosRankSum=4.194;VQSLOD=3.7097;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,33:35:56.14:624,56,0	0/0:15,0:15:30.02:0,30,334	0/0:25,0:20:29.90:0,30,284	0/1:19,0:15:4.50:5,0,102	1/1:0,14:16:35:305,35,0	0/0:14,0:14:39.04:0,39,412	0/0:17,0:17:31.89:0,32,482	0/0:7,0:33:78.64:0,79,478	0/0:25,0:25:75.15:0,75,848	1/1:4,20:24:50.81:492,51,0	1/1:0,19:19:36.04:347,36,0	1/1:2,21:23:53.76:503,54,0	1/1:0,19:19:51.08:492,51,0	1/1:0,19:19:45.07:434,45,0	1/1:5,7:12:27.19:233,27,0	1/1:2,17:19:42.07:405,42,0	0/0:29,0:29:72.17:0,72,833	1/1:8,33:41:99:955,99,0	0/0:3,0:20:48.98:0,49,262	0/0:2,0:20:48.98:0,49,258	0/0:0,0:22:40.34:0,40,210	1/1:1,19:20:37.20:398,37,0	1/1:1,19:20:44.89:434,45,0	1/1:3,18:21:45.07:434,45,0	1/1:2,15:17:33.05:318,33,0	1/1:1,23:24:66.67:584,67,0	0/0:2,0:20:43.13:0,43,219	0/0:1,0:14:31.63:0,32,161
chr10	43218619	.	TCTCCTCTTC	T	2494.63	PASS	AB=0.857;AC=11;AF=0.196;AN=56;BaseQRankSum=2.717;DP=567;FS=8.268;HRun=0;HaplotypeScore=237.6024;InbreedingCoeff=0.8794;MQ=58.08;MQ0=16;MQRankSum=-5.506;QD=23.99;ReadPosRankSum=-1.509;VQSLOD=1.3266;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:36.12:0,36,1225	0/0:8,0:8:18.06:0,18,665	0/0:54,0:23:27.08:0,27,609	0/0:51,0:23:42.53:0,43,980	0/0:22,0:22:45.15:0,45,1853	0/0:12,0:12:33.11:0,33,1127	0/0:16,0:16:36.12:0,36,1144	1/1:25,0:24:30.07:486,30,0	0/0:11,0:11:30.09:0,30,980	0/0:21,0:20:51.18:0,51,1841	0/0:11,0:11:27.09:0,27,954	0/0:14,0:14:39.13:0,39,1418	0/0:20,0:20:57.20:0,57,2022	0/0:26,0:25:63.22:0,63,2184	0/0:21,0:21:54.19:0,54,2131	0/0:21,0:21:54.14:0,54,1782	0/0:29,0:29:19.34:0,19,2543	0/0:22,0:21:46.75:0,47,1850	1/1:12,0:9:6:73,6,0	1/1:17,4:21:39.13:833,39,0	0/1:20,4:24:4.31:592,0,4	0/0:13,0:13:30.10:0,30,965	0/0:22,0:22:15.05:0,15,437	0/0:17,0:17:41.91:0,42,1347	0/0:16,0:16:39.13:0,39,1352	0/0:18,0:18:48.15:0,48,1723	1/1:9,2:11:18.06:423,18,0	1/1:11,0:10:12.04:259,12,0
chr10	43218630	.	T	TCTC	2708.25	PASS	AB=0.787;AC=10;AF=0.179;AN=56;BaseQRankSum=2.866;DP=497;FS=3.441;HRun=0;HaplotypeScore=168.3330;InbreedingCoeff=0.7874;MQ=57.26;MQ0=16;MQRankSum=-6.193;QD=32.24;ReadPosRankSum=-1.815;VQSLOD=3.2554;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:36.12:0,36,618	0/0:7,0:7:18.06:0,18,318	0/0:45,0:15:29.89:0,30,474	0/0:56,0:22:43:0,43,723	0/0:17,0:17:45.15:0,45,789	0/0:11,0:11:33.11:0,33,582	0/0:12,0:12:36.12:0,36,616	1/1:13,7:20:28.34:583,28,0	0/0:10,0:10:30.09:0,30,491	0/0:18,0:17:51.17:0,51,900	0/0:9,0:9:27.09:0,27,467	0/0:13,0:13:39.13:0,39,688	0/0:19,0:19:57.20:0,57,1005	0/0:22,0:21:63.22:0,63,1101	0/0:19,0:19:57.19:0,57,991	0/0:18,0:18:54.14:0,54,909	0/0:26,0:26:39.35:0,39,1190	0/0:21,0:20:55.07:0,55,933	0/1:7,1:5:5.66:103,0,6	1/1:6,11:17:42.14:879,42,0	0/1:13,11:24:8.75:548,0,9	0/0:11,0:11:30.10:0,30,520	0/0:20,0:20:15.05:0,15,264	0/0:16,0:16:45.11:0,45,757	0/0:13,0:13:39.13:0,39,687	0/0:16,0:16:48.15:0,48,819	1/1:5,4:9:21.07:479,21,0	1/1:1,4:4:12.04:283,12,0
chr10	43218640	.	CTCCCTCCTCCTCTACCTCCTCCTCTTCCTCCTTCTCCTCTCCCTCCTCCTT	C	16904.32	PASS	AB=1.000;AC=47;AF=0.839;AN=56;BaseQRankSum=5.135;DP=429;FS=8.795;HRun=0;HaplotypeScore=427.3465;InbreedingCoeff=0.7784;MQ=52.92;MQ0=15;MQRankSum=-4.445;QD=57.89;ReadPosRankSum=-0.618;VQSLOD=1.8217;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:11:27.09:879,27,0	1/1:6,0:6:9.03:313,9,0	0/0:45,0:10:6.85:0,7,34	0/0:51,0:14:5.52:0,6,82	0/0:17,0:17:39.07:0,39,2042	1/1:9,0:9:27.02:619,27,0	1/1:7,0:7:15.04:275,15,0	1/1:11,0:9:13.99:205,14,0	1/1:8,0:8:18.04:631,18,0	1/1:15,0:15:30.08:1052,30,0	1/1:7,0:7:21.05:508,21,0	1/1:12,0:12:30.05:971,30,0	1/1:18,0:18:39.06:1495,39,0	1/1:21,0:20:39.13:1269,39,0	0/1:21,0:20:0.83:1,0,2026	1/1:14,0:14:36.10:1537,36,0	0/0:23,0:23:28.24:0,28,3095	1/1:17,0:16:41.92:1275,42,0	1/1:4,0:4:6.02:222,6,0	1/1:14,0:13:28.74:495,29,0	1/1:21,0:20:38.89:1070,39,0	1/1:9,0:9:15.02:321,15,0	1/1:3,15:18:2.92:17,3,0	1/1:13,0:13:18.05:663,18,0	1/1:11,0:11:30.05:1026,30,0	1/1:14,0:14:36.04:1148,36,0	1/1:6,0:6:16.08:250,16,0	1/1:5,0:4:12.04:663,12,0
chr10	43218645	.	TC	T	629.48	PASS	AB=0.800;AC=9;AF=0.161;AN=56;BaseQRankSum=6.195;DP=396;FS=2.572;HRun=3;HaplotypeScore=137.8129;InbreedingCoeff=0.7638;MQ=51.09;MQ0=18;MQRankSum=-5.895;QD=13.11;ReadPosRankSum=-0.677;VQSLOD=2.2610;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:33.07:0,33,462	0/0:4,0:4:12.04:0,12,180	0/0:41,0:6:10.58:0,11,129	0/0:52,0:12:8.31:0,8,154	0/0:17,0:17:45.15:0,45,659	0/0:9,0:9:27.09:0,27,404	0/0:7,0:7:21.07:0,21,310	0/0:10,0:8:14.76:0,15,138	0/0:8,0:8:24.06:0,24,338	0/0:11,0:11:30.10:0,30,449	0/0:7,0:7:21.07:0,21,314	0/0:11,0:11:33.09:0,33,473	0/0:16,0:16:45.12:0,45,636	0/0:19,0:18:48.16:0,48,718	0/0:17,0:16:48.16:0,48,712	0/0:13,0:13:39.13:0,39,579	0/0:21,0:21:53.25:0,53,821	0/0:17,0:16:45.11:0,45,649	0/1:3,1:4:29.90:30,0,75	1/1:7,5:11:15.17:215,15,0	1/1:14,7:20:15.43:234,15,0	0/0:7,0:7:15.05:0,15,224	0/0:16,0:16:3:0,3,26	0/0:11,0:11:24.08:0,24,357	0/0:11,0:11:33.11:0,33,494	0/0:12,0:12:36.12:0,36,539	1/1:4,2:6:12.04:151,12,0	1/1:1,4:4:12.04:155,12,0
chr10	43218657	.	TC	T	5377.54	PASS	AB=0.800;AC=42;AF=0.778;AN=54;BaseQRankSum=8.196;DP=347;FS=9.012;HRun=2;HaplotypeScore=109.8724;InbreedingCoeff=0.7225;MQ=59.31;MQ0=18;MQRankSum=-6.845;QD=29.55;ReadPosRankSum=-1.455;VQSLOD=3.2219;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,9:10:8.64:326,9,0	1/1:0,3:3:9.03:114,9,0	0/0:44,0:10:13.07:0,13,133	0/0:50,0:13:17.48:0,17,204	0/0:17,0:17:45.15:0,45,674	1/1:3,5:8:21.07:270,21,0	1/1:0,4:4:12.04:156,12,0	1/1:4,3:5:9.03:117,9,0	1/1:0,5:5:15.05:192,15,0	1/1:2,8:10:27.09:348,27,0	1/1:0,6:6:18.06:233,18,0	1/1:1,9:10:30.08:372,30,0	1/1:2,9:11:30.09:369,30,0	1/1:2,12:13:36.12:462,36,0	0/0:17,0:16:42.14:0,42,629	1/1:1,10:11:30.10:383,30,0	0/0:22,0:22:59.27:0,59,918	1/1:1,12:12:33.11:427,33,0	0/1:1,2:3:14.28:33,0,14	1/1:3,4:6:17.26:144,17,0	1/1:12,7:18:24.78:314,25,0	1/1:0,4:4:9.03:115,9,0	./.	1/1:1,6:7:15.05:192,15,0	1/1:2,8:10:19.63:302,20,0	1/1:2,10:12:30.10:381,30,0	1/1:2,2:4:8.97:80,9,0	0/1:4,0:4:9.37:47,0,9
chr10	43218670	.	CCTT	C	1328.74	PASS	AB=1.000;AC=23;AF=0.426;AN=54;BaseQRankSum=10.520;DP=354;FS=21.932;HRun=0;HaplotypeScore=134.6752;InbreedingCoeff=-0.1594;MQ=55.50;MQ0=16;MQRankSum=-5.962;QD=8.15;ReadPosRankSum=3.073;VQSLOD=1.6068;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:13,0:13:33.07:58,0,33	0/1:3,0:3:16.40:19,0,16	0/0:46,0:13:26.99:0,27,377	0/0:52,0:17:26.46:0,26,477	0/0:18,0:18:45.03:0,45,804	0/1:3,0:3:17.22:21,0,17	0/0:3,0:3:5.72:0,6,40	0/0:5,0:3:4.87:0,5,17	0/1:6,0:6:26.96:66,0,27	0/1:6,0:6:33.78:87,0,34	1/1:6,0:6:2.59:6,3,0	0/1:6,0:6:18.43:73,0,18	0/1:12,0:12:33.54:134,0,34	1/1:7,0:7:15.60:145,16,0	0/0:16,0:16:45.02:0,45,789	0/1:16,0:16:85.71:169,0,86	0/0:27,0:27:55.81:0,56,1423	0/1:11,0:10:90:106,0,90	0/1:9,0:7:3.77:4,0,41	0/0:7,0:6:0.94:0,1,2	1/1:16,2:17:12:149,12,0	0/1:7,0:7:23.72:24,0,28	./.	0/1:10,0:10:45.46:81,0,45	0/1:12,0:12:52.46:107,0,52	0/1:9,0:9:58.02:117,0,58	0/1:6,0:6:1.30:4,0,1	1/1:1,2:3:8.99:120,9,0
chr10	43218686	.	C	CTCT	6023.56	PASS	AB=0.645;AC=31;AF=0.596;AN=52;BaseQRankSum=1.252;DP=419;FS=2.381;HRun=0;HaplotypeScore=114.1314;InbreedingCoeff=0.1170;MQ=51.09;MQ0=17;MQRankSum=-5.530;QD=26.30;ReadPosRankSum=1.307;VQSLOD=5.1836;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,8:11:21.23:378,21,0	1/1:1,4:5:6.02:137,6,0	0/0:53,0:15:17.63:0,18,360	0/0:63,0:21:39.88:0,40,516	0/0:12,0:12:30.10:0,30,495	1/1:1,6:7:15.05:319,15,0	1/1:0,12:13:9.03:207,9,0	1/1:8,0:7:17.58:151,18,0	0/1:2,6:9:20.65:244,0,21	0/1:3,2:7:33.36:152,0,33	1/1:2,7:9:12.04:239,12,0	0/1:3,7:11:22.74:405,0,23	0/1:7,9:17:49.85:418,0,50	0/1:3,8:12:27.66:437,0,28	0/0:16,0:16:39.06:0,39,602	0/1:5,9:15:24.77:539,0,25	0/0:23,0:23:66.13:0,66,1044	0/1:6,6:11:44.60:263,0,45	1/1:12,0:10:19.13:97,19,0	1/1:7,0:7:12.03:136,12,0	0/1:19,0:18:17.37:123,0,17	1/1:2,11:13:30.10:606,30,0	./.	0/1:2,10:12:1.43:309,0,1	0/1:7,6:13:17.32:389,0,17	0/1:4,6:10:45.90:347,0,46	1/1:7,0:7:17.64:130,18,0	./.
chr10	43218688	.	CCTT	C	1315.05	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=-1.581;DP=422;FS=3.998;HRun=0;HaplotypeScore=123.9002;InbreedingCoeff=0.1429;MQ=52.94;MQ0=15;MQRankSum=-3.412;QD=5.87;ReadPosRankSum=-1.489;VQSLOD=2.5575;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:14,0:14:32.07:56,0,32	0/0:4,0:4:3.10:0,3,20	0/0:57,0:16:33.04:0,33,666	0/0:63,0:21:39.59:0,40,720	0/0:12,0:12:33.06:0,33,712	0/1:6,0:6:9.95:21,0,10	0/0:13,0:13:4.60:0,5,29	1/1:7,2:8:11.16:152,11,0	0/1:10,0:10:12.88:13,0,59	0/1:7,0:7:28.70:29,0,66	1/1:8,0:8:6.34:28,6,0	0/1:10,0:10:25:30,0,25	0/1:16,0:16:13.96:14,0,109	0/1:12,0:12:10.96:11,0,30	0/0:15,0:15:42.07:0,42,910	0/1:17,0:17:28.28:28,0,102	0/0:23,0:23:55.98:0,56,1453	0/1:12,0:12:10.17:10,0,99	1/1:3,9:10:24.04:278,24,0	1/1:0,8:8:14.72:102,15,0	1/1:12,6:17:28.56:267,29,0	1/1:14,0:14:11.57:116,12,0	1/1:15,0:15:2.92:17,3,0	0/1:11,0:11:9.87:10,0,35	0/1:13,0:13:46.08:46,0,58	0/0:10,0:10:14.22:0,14,159	1/1:0,7:7:17.98:206,18,0	1/1:4,0:4:8.95:67,9,0
chr10	43218739	.	TTCC	T	1515.08	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.499;DP=671;FS=21.790;HRun=0;HaplotypeScore=134.9702;InbreedingCoeff=0.9964;MQ=57.35;MQ0=11;MQRankSum=0.704;QD=32.94;ReadPosRankSum=3.328;VQSLOD=2.7330;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:24:54.07:0,54,997	0/0:7,0:7:21.06:0,21,352	0/0:43,0:15:24:0,24,335	0/0:52,0:29:49.21:0,49,811	1/1:4,18:22:48.12:697,48,0	0/0:15,0:15:39.09:0,39,740	0/0:35,0:35:72.25:0,72,1412	0/0:22,0:22:30.89:0,31,624	0/0:20,0:20:48.12:0,48,931	0/0:26,0:26:75.21:0,75,1472	0/0:16,0:16:36.04:0,36,661	0/0:24,0:24:66.16:0,66,1171	0/0:27,0:27:69.13:0,69,1344	0/0:22,0:22:60.13:0,60,1121	1/1:2,22:24:63.21:939,63,0	0/0:30,0:30:75.08:0,75,1390	0/0:28,0:28:69.19:0,69,1250	0/0:24,0:24:53.12:0,53,1109	0/0:15,0:15:35.98:0,36,565	0/0:16,0:15:39.10:0,39,700	0/0:27,0:26:57.04:0,57,1006	0/0:27,0:27:75.19:0,75,1433	0/0:23,0:23:44.93:0,45,835	0/0:24,0:24:42.14:0,42,826	0/0:22,0:22:60.07:0,60,1111	0/0:20,0:20:60.16:0,60,1160	0/0:17,0:16:48.04:0,48,818	0/0:17,0:16:51.16:0,51,962
chr10	43219145	.	A	AAG	2250.75	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.624;DP=706;FS=0.572;HRun=0;HaplotypeScore=91.5347;InbreedingCoeff=0.9977;MQ=75.53;MQ0=0;MQRankSum=-2.110;QD=35.73;ReadPosRankSum=1.035;VQSLOD=5.7951;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,108,1438	0/0:11,0:11:33.11:0,33,439	0/0:30,0:28:63.61:0,64,812	0/0:26,0:24:55.52:0,56,657	1/1:2,19:21:48.16:829,48,0	0/0:26,0:26:75.25:0,75,999	0/0:25,0:25:60.16:0,60,780	0/0:20,0:20:45.15:0,45,596	0/0:31,0:31:81.26:0,81,1064	0/0:27,0:27:72.22:0,72,931	0/0:15,0:15:42.14:0,42,559	0/0:30,0:30:78.24:0,78,1019	0/0:22,0:22:66.20:0,66,851	0/0:22,0:22:60.20:0,60,798	1/1:9,32:41:90.31:1543,90,0	0/0:38,0:38:96.29:0,96,1235	0/0:31,0:31:78.23:0,78,1018	0/0:24,0:24:69.17:0,69,884	0/0:17,0:17:42.12:0,42,528	0/0:21,0:21:54.18:0,54,717	0/0:30,0:30:87.26:0,87,1127	0/0:26,0:26:75.24:0,75,985	0/0:17,0:17:39.11:0,39,501	0/0:25,0:25:66.22:0,66,877	0/0:26,0:26:78.24:0,78,1022	0/0:29,0:29:84.28:0,84,1117	0/0:29,0:29:87.28:0,87,1141	0/0:7,0:7:21.03:0,21,244
chr10	43219929	.	CT	C	14742.55	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=13.626;DP=790;FS=2.987;HRun=2;HaplotypeScore=77.0996;InbreedingCoeff=0.9999;MQ=58.40;MQ0=2;MQRankSum=2.446;QD=34.28;ReadPosRankSum=2.581;VQSLOD=5.3147;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,46:46:99:1518,117,0	1/1:0,15:15:42.13:539,42,0	0/0:23,1:21:57.18:0,57,791	0/0:33,0:28:70.20:0,70,1064	0/0:21,0:21:63.19:0,63,906	1/1:1,26:27:69.22:896,69,0	1/1:1,26:27:60.19:779,60,0	1/1:1,24:24:69.18:840,69,0	1/1:0,24:24:60.20:778,60,0	1/1:0,34:33:99:1238,99,0	1/1:0,12:12:30.10:389,30,0	0/0:35,0:35:99:0,102,1450	0/0:36,0:36:99:0,108,1578	0/0:34,0:34:99:0,99,1420	0/0:50,0:50:99:0,147,2160	1/1:0,24:24:66.21:857,66,0	0/0:56,0:56:99:0,168,2394	1/1:0,28:28:75.24:973,75,0	1/1:0,17:14:42.12:531,42,0	1/1:1,16:17:45.06:559,45,0	1/1:0,43:43:99:1635,126,0	0/0:16,0:16:45.15:0,45,656	0/0:26,0:26:78.25:0,78,1145	0/0:29,0:29:87.26:0,87,1240	1/1:0,23:23:66.21:856,66,0	1/1:0,24:24:69.22:895,69,0	1/1:0,26:26:63.14:797,63,0	1/1:0,18:18:51.17:662,51,0
chr10	43221493	.	TC	T	11281.25	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=15.857;DP=700;FS=5.137;HRun=7;HaplotypeScore=101.3382;InbreedingCoeff=0.9805;MQ=84.31;MQ0=0;MQRankSum=-2.159;QD=24.96;ReadPosRankSum=2.993;VQSLOD=4.9929;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,33:38:75.16:764,75,0	1/1:0,11:11:27.06:275,27,0	0/0:24,0:24:43.78:0,44,485	0/0:25,0:24:4.62:0,5,448	0/0:32,0:32:90.26:0,90,1106	1/1:1,27:28:78.18:795,78,0	1/1:3,29:32:63.13:642,63,0	1/1:6,33:39:99:1004,102,0	1/1:2,27:29:78.17:795,78,0	1/1:2,26:28:81.15:805,81,0	1/1:0,23:23:66.03:640,66,0	0/0:26,0:26:72.19:0,72,856	0/0:21,0:21:60.19:0,60,753	0/0:15,0:15:39.11:0,39,477	0/0:22,0:22:63.17:0,63,780	1/1:2,24:26:51.09:520,51,0	0/0:18,0:18:54.12:0,54,636	1/1:1,17:18:51.12:520,51,0	1/1:5,17:22:51.04:500,51,0	1/1:4,24:28:68.99:668,69,0	1/1:6,23:29:63.14:642,63,0	0/0:27,0:27:81.17:0,81,996	0/0:20,0:20:54.17:0,54,679	0/0:18,0:18:47.89:0,48,577	1/1:0,24:24:69.16:704,69,0	1/1:3,30:33:90.18:906,90,0	1/1:5,20:24:57.13:581,57,0	1/1:0,19:19:51.12:520,51,0
chr10	43222059	.	A	AAAGGGAAGGGAAGGGAAGGG	15059.25	PASS	AB=1.000;AC=37;AF=0.661;AN=56;BaseQRankSum=5.810;DP=713;FS=1.439;HRun=0;HaplotypeScore=299.6887;InbreedingCoeff=0.1897;MQ=64.94;MQ0=7;MQRankSum=-9.482;QD=30.61;ReadPosRankSum=-0.903;VQSLOD=3.2885;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:39,0:39:75.19:2896,75,0	1/1:5,0:5:6.02:106,6,0	0/0:68,0:37:37.82:0,38,652	0/0:64,0:40:1.58:0,2,617	0/0:19,0:19:45.12:0,45,1427	1/1:5,14:27:12.04:892,12,0	1/1:25,0:24:57.13:1655,57,0	0/1:39,0:37:74.44:768,0,74	1/1:7,12:24:6.02:562,6,0	1/1:6,0:22:41.99:816,42,0	1/1:4,0:15:12.04:636,12,0	0/1:27,0:27:71.62:282,0,72	0/1:24,0:24:14.41:411,0,14	0/1:21,0:21:48.89:290,0,49	0/0:33,0:33:78.24:0,78,3337	1/1:4,0:27:12.04:647,12,0	0/0:37,0:37:78.20:0,78,2703	1/1:8,0:22:6.02:322,6,0	0/1:20,0:20:28.07:314,0,28	1/1:17,0:16:16.47:197,16,0	0/1:22,0:21:38.12:38,0,62	0/1:11,0:10:31.45:115,0,31	1/1:20,0:20:27.09:447,27,0	1/1:20,0:20:13.84:235,14,0	1/1:3,0:11:9.03:480,9,0	1/1:3,0:27:69.22:2623,69,0	0/1:23,0:23:14.97:292,0,15	0/1:4,0:4:29.82:33,0,30
chr10	43222069	.	G	GAAGGGAAGGA	15933.50	PASS	AB=1.000;AC=38;AF=0.679;AN=56;BaseQRankSum=-0.041;DP=712;FS=5.460;HRun=0;HaplotypeScore=182.3750;InbreedingCoeff=0.2697;MQ=62.72;MQ0=6;MQRankSum=-8.443;QD=31.43;ReadPosRankSum=3.704;VQSLOD=3.8749;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:40,0:40:71.45:698,0,71	0/1:7,0:7:40.77:41,0,99	0/0:65,0:34:39.86:0,40,690	0/0:51,0:31:16.80:0,17,399	0/0:23,0:23:53.66:0,54,1091	0/1:25,0:25:17.91:346,0,18	0/1:25,0:24:30.29:530,0,30	1/1:39,0:37:87.21:1778,87,0	0/1:20,0:20:50.62:210,0,51	1/1:19,0:19:3.14:278,3,0	1/1:12,0:12:12.04:431,12,0	1/1:12,18:33:21.07:1048,21,0	1/1:6,15:23:27.09:1363,27,0	1/1:5,15:22:21.07:1046,21,0	0/0:32,0:32:81.23:0,81,2179	0/1:25,0:25:10.48:435,0,10	0/0:31,0:31:78.06:0,78,1787	0/1:20,0:20:17.97:195,0,18	1/1:7,16:27:60.11:1557,60,0	1/1:8,9:20:20.33:665,20,0	1/1:8,9:16:3.01:142,3,0	1/1:4,10:16:17.80:510,18,0	1/1:5,12:21:27.09:1279,27,0	1/1:5,17:25:11.96:446,12,0	0/1:9,0:9:25.95:319,0,26	1/1:29,0:29:7.79:1380,8,0	1/1:6,17:24:24.55:1084,25,0	1/1:2,4:7:3.01:153,3,0
chr10	43222259	.	GGTTTGTTTGTTTGTTT	G	4359.28	PASS	AB=0.630;AC=27;AF=0.500;AN=54;BaseQRankSum=5.488;DP=572;FS=36.961;HRun=0;HaplotypeScore=235.9020;InbreedingCoeff=0.6436;MQ=59.85;MQ0=2;MQRankSum=-4.862;QD=16.96;ReadPosRankSum=1.343;VQSLOD=2.6921;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:10,20:29:21.07:895,21,0	0/0:3,0:3:5.96:0,6,44	0/0:25,0:22:33.10:0,33,1240	0/0:29,0:25:51.17:0,51,1996	0/0:41,0:41:84.27:0,84,3361	1/1:4,0:18:18.02:176,18,0	0/1:9,0:22:66.96:67,0,101	1/1:17,3:19:8.99:127,9,0	0/1:5,0:14:61.84:77,0,62	1/1:22,1:22:21.34:470,21,0	1/1:9,4:13:12.04:212,12,0	0/0:22,0:22:36.12:0,36,1280	0/0:15,0:15:12.04:0,12,422	0/0:14,0:15:24.08:0,24,941	0/0:29,0:29:49.09:0,49,2034	0/1:7,0:15:32.18:94,0,32	0/0:39,0:42:99:0,108,6281	1/1:5,4:9:3.01:133,3,0	1/1:16,4:20:8.98:183,9,0	1/1:7,17:24:27.05:1118,27,0	1/1:16,0:16:5.91:99,6,0	0/0:27,0:27:57.18:0,57,2381	0/0:20,0:19:30.10:0,30,1267	0/0:46,0:45:81.74:0,82,3393	1/1:2,4:6:3.01:125,3,0	1/1:9,8:17:18.06:526,18,0	1/1:9,0:8:3.01:57,3,0	./.
chr10	43222306	.	CTGGT	C	465.57	PASS	AB=0.692;AC=3;AF=0.054;AN=56;BaseQRankSum=1.544;DP=626;FS=14.852;HRun=0;HaplotypeScore=188.6882;InbreedingCoeff=0.2308;MQ=39.14;MQ0=19;MQRankSum=-0.935;QD=7.39;ReadPosRankSum=0.421;VQSLOD=1.9924;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:23:5.40:0,5,56	0/0:5,0:5:2.74:0,3,33	0/0:31,0:11:3.01:0,3,59	0/0:33,0:13:3.01:0,3,45	0/1:20,16:36:62.27:243,0,62	0/0:20,0:20:15.15:0,15,70	0/0:20,0:18:5.40:0,5,39	0/0:26,0:24:42.74:0,43,272	0/0:17,0:16:12.98:0,13,67	0/0:18,0:14:12.62:0,13,144	0/0:16,0:16:3.90:0,4,28	0/0:19,0:18:24.04:0,24,409	0/0:13,0:13:23.57:0,24,459	0/0:12,0:12:18.06:0,18,399	1/1:9,18:27:19.49:323,19,0	0/0:14,0:14:15.66:0,16,108	0/0:50,0:50:99:0,113,2221	0/0:15,0:9:4.33:0,4,24	0/0:17,0:12:2.43:0,2,19	0/0:28,0:24:8.09:0,8,63	0/0:8,0:8:0.47:0,0,1	0/0:34,0:34:49.86:0,50,656	0/0:34,0:32:58.89:0,59,749	0/0:56,0:55:96.25:0,96,1933	0/0:19,0:16:20.99:0,21,170	0/0:23,0:20:1.65:0,2,123	0/0:7,0:7:1.33:0,1,50	0/0:3,0:3:5.19:0,5,26
chr10	43222384	.	A	ATTG	286.78	PASS	AB=0.986;AC=9;AF=0.161;AN=56;BaseQRankSum=4.813;DP=474;FS=11.900;HRun=0;HaplotypeScore=216.4020;InbreedingCoeff=-0.0513;MQ=32.17;MQ0=18;MQRankSum=-2.735;QD=1.86;ReadPosRankSum=2.284;VQSLOD=1.5464;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:11,0:10:53.91:77,0,54	0/0:7,0:6:17.78:0,18,168	0/0:21,0:7:16.38:0,16,231	0/0:11,0:3:8.06:0,8,100	0/0:44,0:44:64.75:0,65,1033	0/0:14,0:13:16.61:0,17,290	0/0:10,0:7:21.05:0,21,355	0/0:4,0:3:6.02:0,6,103	0/0:11,0:10:12.02:0,12,134	0/1:30,0:28:99:178,0,413	0/1:13,0:10:0.48:0,0,131	0/0:14,3:16:13.92:0,14,341	0/0:13,2:15:5.91:0,6,254	0/0:10,0:10:21.07:0,21,343	0/1:31,2:33:16.37:16,0,780	0/0:11,0:11:11.59:0,12,129	0/0:26,0:26:69.02:0,69,1210	1/1:6,0:3:0.52:34,1,0	0/0:14,0:10:20.88:0,21,275	0/0:21,0:20:52.48:0,52,467	0/0:2,0:2:6.01:0,6,75	0/0:27,0:26:25.13:0,25,485	0/1:22,1:24:14.56:15,0,488	0/0:30,0:28:67.08:0,67,1025	0/1:20,0:19:50.92:51,0,246	0/1:17,0:15:44.06:44,0,265	0/0:15,0:15:23.32:0,23,288	0/0:9,0:7:21.04:0,21,223
chr10	43222385	.	GT	G	812.86	PASS	AB=0.724;AC=7;AF=0.125;AN=56;BaseQRankSum=0.015;DP=473;FS=3.946;HRun=2;HaplotypeScore=197.5502;InbreedingCoeff=0.0829;MQ=32.22;MQ0=17;MQRankSum=0.067;QD=8.47;ReadPosRankSum=0.771;VQSLOD=1.2829;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:5,6:10:46.33:102,0,46	0/0:7,0:6:14.98:0,15,166	0/0:21,0:7:18.53:0,19,253	0/0:10,0:3:4.56:0,5,71	0/0:46,0:45:80.86:0,81,1093	0/0:14,0:13:24.07:0,24,301	0/0:10,0:7:21.07:0,21,316	0/0:4,0:3:6.02:0,6,89	0/0:10,0:9:11.97:0,12,144	0/1:18,12:28:99:385,0,382	0/1:8,4:10:92.65:93,0,155	0/0:17,0:16:30.09:0,30,410	0/0:15,0:15:21.07:0,21,319	0/0:10,0:10:21.05:0,21,280	0/0:33,0:33:75.16:0,75,979	0/0:11,0:11:11.97:0,12,146	0/0:26,0:26:71.49:0,71,1015	1/1:3,3:3:6.02:77,6,0	0/0:14,0:10:20.40:0,20,239	0/0:22,0:21:52.35:0,52,621	0/0:2,0:2:6.02:0,6,78	0/0:27,0:26:44.77:0,45,539	0/0:24,0:24:43.39:0,43,504	0/0:30,0:28:66.05:0,66,901	0/1:15,5:19:97:97,0,473	0/1:10,7:15:99:189,0,211	0/0:15,0:15:23.90:0,24,334	0/0:9,0:7:21.06:0,21,271
chr10	43222397	.	G	GTTGT	2784.19	PASS	AB=0.882;AC=35;AF=0.648;AN=54;BaseQRankSum=4.648;DP=387;FS=54.382;HRun=0;HaplotypeScore=178.6900;InbreedingCoeff=0.1927;MQ=32.13;MQ0=6;MQRankSum=-3.857;QD=9.73;ReadPosRankSum=-0.283;VQSLOD=0.9057;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,3:7:12.04:223,12,0	1/1:5,1:5:7.19:108,7,0	0/0:20,0:7:12.03:0,12,179	./.	0/1:39,0:39:40.83:41,0,198	0/1:7,3:9:35.10:170,0,35	1/1:8,1:7:8.99:140,9,0	1/1:2,0:1:3.01:49,3,0	1/1:2,4:5:3.48:79,3,0	1/1:20,6:24:11.42:629,11,0	1/1:7,1:8:2.63:134,3,0	0/1:15,0:15:8.01:8,0,137	0/1:15,0:15:17.61:18,0,170	0/0:8,0:8:3.90:0,4,41	0/1:31,0:31:10.57:11,0,263	1/1:2,5:7:0.47:1,0,0	0/0:24,0:24:12.97:0,13,339	1/1:4,1:3:6.02:115,6,0	1/1:9,1:8:3.01:78,3,0	1/1:16,1:16:12.44:203,12,0	0/0:1,0:1:0.47:0,0,1	1/1:22,0:24:1:42,1,0	0/0:16,0:15:2.42:0,2,66	0/0:25,0:23:27.53:0,28,396	1/1:13,1:15:28.93:257,29,0	1/1:10,1:10:17.99:268,18,0	0/1:6,7:13:26.69:147,0,27	0/1:5,2:7:2.74:225,0,3
chr10	43222403	.	T	TTA	508.53	PASS	AB=0.890;AC=10;AF=0.179;AN=56;BaseQRankSum=4.331;DP=322;FS=8.482;HRun=0;HaplotypeScore=139.1513;InbreedingCoeff=-0.0085;MQ=31.38;MQ0=4;MQRankSum=-1.526;QD=4.71;ReadPosRankSum=1.672;VQSLOD=2.1151;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:5:7.26:0,7,51	0/1:4,1:4:52.17:52,0,61	0/0:16,0:6:15.52:0,16,241	0/0:6,0:1:2.97:0,3,20	0/1:25,8:34:99:354,0,613	0/0:9,0:8:5.62:0,6,127	0/0:7,0:5:6.49:0,6,95	0/0:2,0:1:3.01:0,3,32	1/1:5,0:5:0.89:3,1,0	0/0:19,0:17:29.15:0,29,262	0/0:6,0:6:17.71:0,18,146	0/0:15,0:15:30.10:0,30,443	0/0:15,0:15:23.82:0,24,288	0/1:6,0:6:15.41:15,0,77	0/0:25,0:25:53.85:0,54,717	0/1:6,0:6:0:0,0,0	0/0:20,0:20:51.10:0,51,743	0/0:5,0:3:1.59:0,2,37	0/0:5,0:4:1.25:0,1,3	0/0:14,0:14:35.93:0,36,428	0/0:1,0:1:0.47:0,0,1	0/1:19,3:21:99:119,0,328	0/1:8,3:11:37.84:38,0,127	0/0:23,0:21:44.98:0,45,656	0/0:12,0:12:16.37:0,16,263	0/1:6,1:6:45.13:45,0,78	0/1:10,0:10:0.20:0,0,44	0/0:7,0:7:10.41:0,10,131
chr10	43223543	.	AG	A	15984.78	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=11.929;DP=814;FS=6.784;HRun=3;HaplotypeScore=81.8700;InbreedingCoeff=0.9986;MQ=84.81;MQ0=0;MQRankSum=-5.565;QD=33.16;ReadPosRankSum=0.708;VQSLOD=5.1438;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,49:52:99:1711,138,0	1/1:1,11:12:27.08:335,27,0	0/0:28,0:28:75.21:0,75,1043	0/0:30,0:30:68.48:0,68,1043	0/0:24,0:24:72.24:0,72,1036	1/1:1,19:20:57.18:703,57,0	1/1:2,44:46:99:1525,123,0	1/1:1,24:25:72.19:855,72,0	1/1:1,28:29:66.21:818,66,0	1/1:2,33:35:99:1226,99,0	1/1:1,10:11:30.09:372,30,0	0/0:34,0:34:96.32:0,96,1381	0/0:26,0:26:78.26:0,78,1121	0/0:30,0:30:90.30:0,90,1296	0/0:34,0:34:99:0,102,1468	1/1:0,24:24:69.22:855,69,0	0/0:39,0:39:99:0,117,1682	1/1:2,31:33:87.27:1079,87,0	1/1:0,19:19:57.18:705,57,0	1/1:1,21:22:60.19:743,60,0	1/1:1,57:58:99:1823,147,0	0/0:23,0:23:66.20:0,66,928	0/0:30,0:30:81.27:0,81,1160	0/0:34,0:34:99:0,99,1425	1/1:0,26:26:66.21:817,66,0	1/1:2,35:37:99:1302,105,0	1/1:2,25:27:72.23:893,72,0	1/1:0,6:6:18.06:223,18,0
chr10	43224100	.	C	CTATCTCTCTCTCTCTTTCTT	22023.61	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=7.029;DP=745;FS=13.150;HRun=0;HaplotypeScore=408.5529;InbreedingCoeff=0.9730;MQ=56.75;MQ0=15;MQRankSum=-14.670;QD=58.89;ReadPosRankSum=-0.912;VQSLOD=2.7050;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:23:59.28:1316,59,0	1/1:9,0:9:24.08:551,24,0	0/0:60,0:44:98.70:0,99,3158	0/0:64,0:29:65.16:0,65,1933	0/0:21,0:20:60.17:0,60,2770	1/1:3,14:20:3:25,3,0	1/1:19,0:18:43.09:819,43,0	1/1:45,0:39:25.31:1907,25,0	1/1:22,0:22:56.86:1429,57,0	1/1:33,0:33:92.10:2695,92,0	1/1:17,0:16:35.68:642,36,0	0/0:30,0:30:63.06:0,63,2583	0/0:26,0:26:60.52:0,61,1998	0/0:29,0:28:62.51:0,63,2951	0/0:40,0:40:99:0,108,5234	1/1:22,0:22:60.32:1175,60,0	0/0:28,0:28:81.19:0,81,3966	1/1:17,0:17:33.11:1230,33,0	1/1:15,0:15:42.14:1660,42,0	1/1:24,0:24:47.03:1775,47,0	1/1:15,0:14:29.65:531,30,0	0/0:19,0:18:48.02:0,48,1782	0/0:18,0:18:42.09:0,42,1513	0/0:36,0:36:50.41:0,50,2030	1/1:23,0:23:59.74:1016,60,0	1/1:24,0:24:51.78:1744,52,0	1/1:33,0:32:89.20:2605,89,0	1/1:13,0:13:16.86:903,17,0
chr10	43224110	.	C	CTCTCTT	8134.63	PASS	AB=1.000;AC=35;AF=0.625;AN=56;BaseQRankSum=13.590;DP=748;FS=26.216;HRun=0;HaplotypeScore=257.3059;InbreedingCoeff=0.8882;MQ=50.63;MQ0=27;MQRankSum=-14.459;QD=22.10;ReadPosRankSum=-4.885;VQSLOD=2.4840;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:23:40.71:531,41,0	1/1:8,0:8:15.52:215,16,0	0/0:70,0:36:64.35:0,64,1356	0/0:84,0:28:49.10:0,49,903	0/0:23,0:22:51.17:0,51,1201	1/1:14,0:14:3.01:33,3,0	1/1:18,0:17:35.83:414,36,0	1/1:33,0:27:9.02:656,9,0	1/1:21,0:22:48.07:621,48,0	1/1:33,1:34:50.36:951,50,0	1/1:15,1:14:23.67:314,24,0	0/0:31,0:30:21.40:0,21,659	0/0:19,0:22:25.84:0,26,570	0/0:27,0:28:60.18:0,60,885	0/0:40,0:40:96.33:0,96,2260	1/1:24,0:24:23.25:433,23,0	0/0:30,0:30:77.92:0,78,1750	1/1:14,3:17:19.62:440,20,0	1/1:18,0:18:29.86:594,30,0	1/1:22,0:22:44.84:519,45,0	1/1:15,0:14:13.13:201,13,0	0/1:20,0:19:7.86:8,0,440	0/0:16,0:17:33.09:0,33,497	0/0:34,0:34:20.14:0,20,539	1/1:16,4:20:36.16:466,36,0	1/1:20,1:21:47.41:716,47,0	1/1:32,0:31:14.57:696,15,0	1/1:11,0:11:14.61:324,15,0
chr10	43224112	.	CAG	C	6939.03	PASS	AB=0.960;AC=38;AF=0.679;AN=56;BaseQRankSum=12.064;DP=710;FS=38.557;HRun=0;HaplotypeScore=200.8982;InbreedingCoeff=0.5916;MQ=50.85;MQ0=32;MQRankSum=-12.095;QD=16.76;ReadPosRankSum=-5.159;VQSLOD=2.5160;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,9:13:16.68:173,17,0	1/1:5,3:7:15.43:174,15,0	0/0:73,0:37:92.21:0,92,1404	0/0:87,0:27:52.30:0,52,763	0/0:22,0:21:51.04:0,51,912	1/1:13,1:14:2.98:37,3,0	1/1:7,8:14:29.87:350,30,0	1/1:13,13:20:46.23:615,46,0	1/1:10,11:21:51.40:588,51,0	1/1:18,12:30:65.90:698,66,0	1/1:13,4:14:26.31:289,26,0	0/1:26,4:29:23.53:24,0,161	0/1:21,1:22:14.09:14,0,133	0/0:27,1:27:1.99:0,2,173	0/0:38,1:39:96.22:0,96,1686	1/1:12,10:22:42.59:516,43,0	0/0:30,0:30:78.10:0,78,1314	1/1:14,3:17:28.49:253,28,0	1/1:5,8:13:34.10:376,34,0	1/1:14,7:21:48.12:572,48,0	1/1:8,3:10:15.89:168,16,0	0/1:20,0:19:24.64:25,0,105	0/0:16,1:17:5.70:0,6,64	0/1:34,0:34:31:31,0,89	1/1:12,8:20:44.37:509,44,0	1/1:11,8:19:51.98:438,52,0	1/1:19,11:29:71.63:714,72,0	1/1:3,8:11:33.01:377,33,0
chr10	43224120	.	C	CTCTCTCTT	1819.23	PASS	AB=0.975;AC=15;AF=0.268;AN=56;BaseQRankSum=3.220;DP=756;FS=3.294;HRun=0;HaplotypeScore=296.9279;InbreedingCoeff=-0.1930;MQ=48.20;MQ0=37;MQRankSum=-5.449;QD=6.10;ReadPosRankSum=-7.669;VQSLOD=0.3302;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:19,0:19:12.11:21,0,12	0/1:8,0:7:2:2,0,22	0/0:67,0:30:44.49:0,44,584	0/0:81,0:23:15.65:0,16,194	0/0:27,0:26:51.10:0,51,1028	0/0:17,0:17:6.44:0,6,50	0/1:18,0:16:36.14:52,0,36	0/1:32,0:26:69.78:70,0,122	0/0:22,0:22:11.69:0,12,121	1/1:33,1:33:1.81:597,2,0	0/1:19,1:17:27.56:161,0,28	0/0:29,0:28:48.39:0,48,557	0/0:23,0:23:25.84:0,26,294	0/0:28,0:27:38.53:0,39,532	0/0:43,0:43:69.81:0,70,1485	0/1:23,0:22:50.87:59,0,51	0/0:32,0:32:77.58:0,78,1560	0/1:16,2:18:4.06:379,0,4	0/1:19,0:19:10.88:165,0,11	0/1:22,0:22:39.55:40,0,53	0/1:15,0:13:15.48:15,0,35	0/0:22,0:21:27.46:0,27,262	0/0:19,0:19:23.99:0,24,262	0/0:35,0:34:35.47:0,35,373	0/1:17,3:20:72.62:73,0,115	0/1:19,1:20:27.55:274,0,28	0/1:30,0:29:62.49:62,0,106	0/0:12,0:12:0.88:0,1,41
chr10	43224142	.	CGTGTGT	C	456.43	PASS	AB=0.850;AC=12;AF=0.231;AN=52;BaseQRankSum=1.248;DP=583;FS=22.359;HRun=0;HaplotypeScore=175.9352;InbreedingCoeff=0.4928;MQ=44.22;MQ0=27;MQRankSum=-3.171;QD=2.54;ReadPosRankSum=-0.028;VQSLOD=1.4414;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:6.02:0,6,106	1/1:6,0:5:2.32:13,2,0	./.	./.	0/0:24,0:24:15.03:0,15,308	0/0:11,0:11:15.05:0,15,205	0/0:15,0:13:6.96:0,7,79	0/0:19,0:17:12.03:0,12,224	0/0:12,0:14:12.04:0,12,167	0/0:17,0:17:7.10:0,7,228	0/0:22,0:19:16.09:0,16,347	1/1:24,3:29:14.93:242,15,0	1/1:21,6:28:5.87:121,6,0	1/1:21,3:24:9.03:158,9,0	0/0:26,0:39:17.71:0,18,301	0/0:15,0:14:15.05:0,15,472	0/0:30,0:30:24.24:0,24,275	0/0:14,0:14:14.96:0,15,289	0/0:10,0:10:6.02:0,6,138	0/0:15,0:15:12.04:0,12,332	0/0:9,0:7:3.01:0,3,97	0/1:11,6:19:0.08:0,0,1	0/0:12,2:16:0.47:0,0,1	0/1:31,8:38:0.41:0,0,0	0/0:14,0:14:15.05:0,15,255	0/1:9,1:10:52.04:52,0,102	0/1:22,0:23:5.85:6,0,562	0/0:9,0:8:15.05:0,15,464
chr10	43224783	.	C	CAAGG	7528.35	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-3.612;DP=670;FS=9.778;HRun=0;HaplotypeScore=140.5346;InbreedingCoeff=0.9877;MQ=77.82;MQ0=0;MQRankSum=-5.257;QD=58.36;ReadPosRankSum=0.261;VQSLOD=6.4261;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,120,2197	0/0:9,0:9:27.09:0,27,495	0/0:28,0:28:78.25:0,78,1357	0/0:30,0:30:78.27:0,78,1430	0/0:23,0:23:66.21:0,66,1199	0/0:21,0:21:60.19:0,60,1079	0/0:30,0:30:78.25:0,78,1411	1/1:5,11:18:48.14:1102,48,0	0/0:22,0:22:66.23:0,66,1224	0/0:28,0:28:78.26:0,78,1422	0/0:12,0:12:36.11:0,36,635	0/0:23,0:23:69.21:0,69,1210	0/0:14,0:14:39.07:0,39,689	0/0:23,0:23:66.20:0,66,1179	0/0:33,0:33:87.27:0,87,1551	0/0:24,0:24:66.20:0,66,1160	0/0:27,0:27:78.21:0,78,1321	0/0:23,0:23:57.20:0,57,1033	1/1:3,4:12:27.03:494,27,0	1/1:0,15:15:42.10:1056,42,0	1/1:6,33:41:90.66:2193,91,0	0/0:24,0:24:72.22:0,72,1271	0/0:21,0:21:45.14:0,45,807	0/0:34,0:34:93.28:0,93,1691	0/0:13,0:13:39.13:0,39,727	0/0:33,0:33:81.25:0,81,1417	1/1:6,29:37:96.33:2443,96,0	1/1:0,5:5:9.03:240,9,0
chr10	43224913	.	TACACACAC	T	1464.21	PASS	AB=0.704;AC=16;AF=0.308;AN=52;BaseQRankSum=7.735;DP=578;FS=6.434;HRun=0;HaplotypeScore=137.3423;InbreedingCoeff=0.6368;MQ=54.79;MQ0=22;MQRankSum=-5.739;QD=7.21;ReadPosRankSum=2.591;VQSLOD=1.9072;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,1:39:5.99:0,6,48	0/0:10,0:10:7.58:0,8,186	./.	./.	1/1:20,11:31:14.08:263,14,0	0/0:18,0:18:15.05:0,15,557	0/0:21,0:22:18.04:0,18,593	0/0:19,0:18:12.04:0,12,289	0/0:11,0:11:6.02:0,6,235	0/0:15,0:15:30.99:0,31,915	0/0:13,0:12:15.05:0,15,367	1/1:8,7:16:15.05:318,15,0	1/1:11,2:15:15.05:298,15,0	1/1:16,11:27:20.86:440,21,0	0/1:9,0:17:35.59:36,0,37	0/1:10,0:16:32:36,0,32	0/0:27,0:26:45.11:0,45,1644	0/0:29,0:24:39.13:0,39,1394	0/0:14,0:14:13.40:0,13,411	0/0:15,0:15:12.04:0,12,376	0/0:41,0:40:33.09:0,33,1117	1/1:17,0:20:2.99:23,3,0	1/1:15,9:24:6.01:149,6,0	1/1:28,7:34:4.25:78,4,0	0/0:26,0:26:30.08:0,30,1164	0/0:15,0:15:17.45:0,17,348	0/0:20,0:20:30.09:0,30,963	0/0:2,0:2:3.01:0,3,85
chr10	43226155	.	CTTGT	C	9290.83	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=11.361;DP=661;FS=2.874;HRun=0;HaplotypeScore=162.0158;InbreedingCoeff=0.8907;MQ=63.22;MQ0=6;MQRankSum=-4.649;QD=17.87;ReadPosRankSum=-0.549;VQSLOD=4.7603;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,28:37:75.26:1201,75,0	1/1:2,0:6:12.01:112,12,0	0/0:18,0:14:6.02:0,6,129	0/0:31,0:25:27.53:0,28,538	0/0:31,0:31:72.25:0,72,1695	1/1:6,0:21:36.04:335,36,0	1/1:13,0:27:33.03:304,33,0	1/1:18,0:27:15.02:140,15,0	1/1:5,0:18:24.03:224,24,0	1/1:9,20:29:60.20:954,60,0	1/1:7,9:16:21.07:336,21,0	1/1:12,0:30:48.05:447,48,0	1/1:7,0:28:51.06:475,51,0	1/1:3,0:22:48.05:447,48,0	0/0:38,0:38:66.23:0,66,1581	1/1:10,0:20:27.03:252,27,0	0/0:23,0:23:11.08:0,11,1257	1/1:7,28:35:56.23:1179,56,0	1/1:15,0:20:15.02:140,15,0	1/1:11,0:22:24.02:220,24,0	1/1:12,0:20:9.01:84,9,0	1/1:5,0:10:12.01:112,12,0	1/1:13,0:24:26.93:240,27,0	1/1:10,0:26:23.06:202,23,0	1/1:8,17:24:39.13:624,39,0	1/1:9,17:26:51.16:792,51,0	1/1:10,0:27:48.05:444,48,0	1/1:2,0:3:3:28,3,0
chr10	43227850	.	A	AGGTGAATG	19190.77	PASS	AB=0.840;AC=54;AF=0.964;AN=56;BaseQRankSum=2.419;DP=443;FS=1.050;HRun=0;HaplotypeScore=270.3240;InbreedingCoeff=-0.0486;MQ=50.13;MQ0=0;MQRankSum=-4.438;QD=43.32;ReadPosRankSum=3.403;VQSLOD=4.4428;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:26:66.18:1254,66,0	1/1:13,0:13:39.04:606,39,0	0/1:8,0:9:99:216,0,130	0/1:8,1:11:99:214,0,232	1/1:21,0:21:53.99:960,54,0	1/1:14,0:14:36.12:633,36,0	1/1:16,0:16:48.16:700,48,0	1/1:25,0:25:69.24:1334,69,0	1/1:19,0:19:54.14:730,54,0	1/1:13,0:13:0.40:530,0,0	1/1:15,0:15:28.58:543,29,0	1/1:18,0:18:54.18:909,54,0	1/1:17,0:17:50.97:672,51,0	1/1:11,0:11:33.09:508,33,0	1/1:20,0:20:57.19:881,57,0	1/1:19,0:19:57.19:837,57,0	1/1:21,0:21:51.16:773,51,0	1/1:5,0:5:15.05:257,15,0	1/1:8,0:8:21.02:373,21,0	1/1:11,0:11:27.08:430,27,0	1/1:16,0:15:29.94:589,30,0	1/1:24,0:24:63.21:1331,63,0	1/1:16,0:16:41.99:745,42,0	1/1:12,0:12:18.05:276,18,0	1/1:14,0:14:36.12:643,36,0	1/1:24,0:24:72.24:1201,72,0	1/1:20,0:20:54.18:799,54,0	1/1:4,0:4:12.04:247,12,0
chr10	43227932	.	CACACACAT	C	2979.53	PASS	AB=0.998;AC=29;AF=0.537;AN=54;BaseQRankSum=3.121;DP=552;FS=7.240;HRun=0;HaplotypeScore=300.3017;InbreedingCoeff=-0.3902;MQ=39.34;MQ0=11;MQRankSum=-4.053;QD=6.13;ReadPosRankSum=1.269;VQSLOD=1.0829;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:32,0:31:47.63:49,0,48	1/1:12,0:12:3.01:69,3,0	0/0:13,0:5:12.03:0,12,221	0/1:20,0:4:1.11:1,0,13	./.	1/1:13,0:13:18.06:398,18,0	1/1:9,0:9:0.96:104,1,0	0/1:19,0:19:70.85:71,0,361	1/1:28,0:28:52.42:1114,52,0	0/1:21,0:21:54.88:55,0,370	0/1:17,0:17:21.29:21,0,26	0/1:27,0:26:15.37:15,0,587	0/1:21,0:21:99:128,0,346	0/1:17,0:17:3.89:4,0,450	0/1:31,0:31:42.03:42,0,84	1/1:13,6:19:32.91:586,33,0	0/1:26,0:26:21.87:22,0,846	0/1:15,0:15:1.64:2,0,298	0/0:11,0:10:0.99:0,1,168	0/1:27,0:27:61.89:62,0,422	0/1:28,0:23:16:16,0,130	0/1:20,0:19:8.97:9,0,309	0/0:18,0:18:15.05:0,15,362	0/1:22,0:22:11.63:12,0,168	0/1:21,1:22:45.94:167,0,46	0/1:19,0:18:42.90:153,0,43	0/1:17,0:17:26.22:26,0,439	0/1:4,0:4:7.07:7,0,66
chr10	43229862	.	T	TG	24268.14	PASS	AC=44;AF=0.815;AN=54;BaseQRankSum=5.334;DP=828;FS=3.314;HRun=2;HaplotypeScore=118.5433;InbreedingCoeff=0.9994;MQ=79.82;MQ0=0;MQRankSum=-6.435;QD=36.77;ReadPosRankSum=2.639;VQSLOD=4.5964;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,34:37:96.32:1380,96,0	1/1:1,9:8:24.08:340,24,0	0/0:26,0:26:72.22:0,72,876	0/0:25,0:25:69.20:0,69,833	0/0:19,0:15:42.13:0,42,521	1/1:0,23:23:60.20:863,60,0	1/1:2,28:30:78.26:1122,78,0	1/1:5,27:32:78.25:1107,78,0	1/1:1,40:41:99:1639,114,0	1/1:2,46:44:99:1832,129,0	1/1:0,18:15:39.13:553,39,0	1/1:1,38:39:99:1548,108,0	1/1:2,28:30:75.08:1074,75,0	1/1:3,30:33:87.29:1239,87,0	0/0:60,0:60:99:0,172,2106	1/1:2,37:39:99:1468,102,0	0/0:37,0:37:99:0,108,1337	1/1:1,23:24:60.20:864,60,0	1/1:1,17:18:51.14:712,51,0	1/1:1,13:10:30.10:432,30,0	1/1:4,59:63:99:2289,160,0	1/1:2,24:25:69.23:985,69,0	1/1:3,22:17:45.15:639,45,0	1/1:2,43:45:99:1685,117,0	1/1:0,16:15:42.14:598,42,0	1/1:2,26:27:72.24:1036,72,0	1/1:1,20:21:60.20:863,60,0	./.
chr10	43231105	.	A	ACTTGAGTG	5327.34	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-3.048;DP=500;FS=51.710;HRun=0;HaplotypeScore=153.5463;InbreedingCoeff=0.9768;MQ=63.39;MQ0=1;MQRankSum=-10.086;QD=70.10;ReadPosRankSum=-4.442;VQSLOD=2.3611;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:31:75.26:0,75,2002	0/0:7,0:7:18.06:0,18,488	0/0:24,0:22:51.17:0,51,1207	0/0:32,0:32:75.26:0,75,1879	0/0:25,0:25:60.11:0,60,1626	0/0:13,0:13:33.11:0,33,894	0/0:21,0:20:54.18:0,54,1423	1/1:12,3:16:39.12:1363,39,0	0/0:16,0:16:35.95:0,36,907	0/0:19,0:19:48.16:0,48,1288	0/0:14,0:14:33.01:0,33,895	0/0:16,0:16:48.16:0,48,1274	0/0:21,0:21:57.20:0,57,1486	0/0:17,0:17:45.15:0,45,1220	0/0:22,0:22:63.22:0,63,1614	0/0:15,0:15:41.86:0,42,1082	0/0:21,0:21:60.21:0,60,1611	0/0:19,0:19:57.17:0,57,1482	1/1:7,0:7:6.49:120,6,0	1/1:7,8:15:36.12:1261,36,0	1/1:13,4:18:24.55:576,25,0	0/0:14,0:14:36:0,36,943	0/0:10,0:10:24.08:0,24,594	0/0:18,0:17:39.13:0,39,1058	0/0:26,0:26:75.13:0,75,1962	0/0:22,0:21:50.67:0,51,1382	1/1:5,4:10:21.07:736,21,0	1/1:5,5:10:30.10:1272,30,0
chr10	43232391	.	C	CTGTGTGTG	3933.57	PASS	AB=0.757;AC=48;AF=0.857;AN=56;BaseQRankSum=1.332;DP=462;FS=4.058;HRun=0;HaplotypeScore=159.4888;InbreedingCoeff=0.5645;MQ=58.58;MQ0=18;MQRankSum=-1.032;QD=10.41;ReadPosRankSum=0.394;VQSLOD=2.7565;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:25:18.68:198,19,0	1/1:2,0:2:2.04:6,2,0	0/0:35,0:20:59.71:0,60,1000	0/0:26,0:18:53.75:0,54,911	1/1:11,0:10:3.01:96,3,0	1/1:14,0:13:2.95:24,3,0	1/1:17,0:16:13.42:151,13,0	1/1:22,0:22:22.12:215,22,0	1/1:12,0:11:18.97:348,19,0	1/1:21,0:20:24.36:162,24,0	1/1:7,0:7:3.88:27,4,0	1/1:16,0:16:20.41:312,20,0	1/1:12,0:11:11.96:212,12,0	0/1:1,15:17:0:0,0,0	1/1:20,0:20:3.32:46,3,0	0/1:13,0:13:3.86:70,0,4	0/0:23,0:23:66.17:0,66,1480	1/1:6,0:6:11.50:279,11,0	1/1:16,0:14:10.55:47,11,0	1/1:18,0:18:18.21:314,18,0	1/1:25,0:23:10.88:96,11,0	1/1:25,0:25:33.90:412,34,0	1/1:13,0:12:5.99:50,6,0	1/1:16,0:16:20.26:326,20,0	1/1:16,0:15:11.28:140,11,0	1/1:18,0:18:14.78:149,15,0	1/1:13,0:12:9.97:231,10,0	1/1:0,0:2:2.98:21,3,0
chr10	43232426	.	TGAGAGAGAGAGAGAGA	T	793.68	PASS	AB=0.895;AC=13;AF=0.283;AN=46;BaseQRankSum=3.521;DP=407;FS=25.462;HRun=0;HaplotypeScore=158.6867;InbreedingCoeff=0.2687;MQ=35.64;MQ0=17;MQRankSum=-3.958;QD=7.15;ReadPosRankSum=0.869;VQSLOD=1.2976;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,1:22:1.25:0,1,3	0/1:2,0:2:0:0,0,0	./.	./.	0/0:14,0:12:15.05:0,15,485	0/0:21,0:18:9.52:0,10,567	0/0:17,0:16:17.08:0,17,968	0/0:10,0:10:0:0,0,0	0/0:21,0:16:4.37:0,4,211	1/1:12,0:10:5.69:117,6,0	./.	0/0:18,0:18:12.04:0,12,634	0/0:17,0:15:18.06:0,18,1004	0/0:14,0:13:2.61:0,3,200	1/1:16,0:17:0.89:2,1,0	./.	0/0:31,0:30:56.05:0,56,1984	0/1:7,0:7:31.99:32,0,43	0/1:12,1:12:1.77:124,0,2	1/1:20,0:19:2.63:18,3,0	./.	0/0:24,0:24:7.50:0,8,417	0/0:18,0:17:9.03:0,9,464	0/0:18,0:16:15.05:0,15,707	1/1:10,2:11:1.25:3,1,0	0/1:6,2:9:14.65:461,0,15	0/1:12,3:14:99:156,0,106	0/0:4,0:2:2.96:0,3,19
chr10	43232709	.	TC	T	24870.98	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=6.881;DP=701;FS=3.145;HRun=1;HaplotypeScore=107.4815;InbreedingCoeff=0.9978;MQ=78.71;MQ0=0;MQRankSum=-6.483;QD=38.80;ReadPosRankSum=3.984;VQSLOD=4.9605;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,45:45:99:1552,111,0	1/1:0,10:10:24.08:335,24,0	0/0:17,0:17:47.95:0,48,695	0/0:16,0:16:45.13:0,45,657	1/1:0,18:18:51.17:713,51,0	1/1:0,25:25:72.24:1007,72,0	1/1:0,30:30:87.29:1217,87,0	1/1:0,27:27:78.25:1071,78,0	1/1:0,29:29:84.28:1175,84,0	1/1:0,30:30:90.29:1242,90,0	1/1:0,17:17:48.16:671,48,0	1/1:0,19:19:51.17:713,51,0	1/1:0,27:27:75.25:1049,75,0	1/1:0,18:18:51.17:713,51,0	1/1:1,23:24:66.22:923,66,0	1/1:0,28:28:78.26:1091,78,0	0/0:27,0:27:78.27:0,78,1238	1/1:0,27:27:72.24:1007,72,0	1/1:0,24:24:72.20:953,72,0	1/1:0,32:32:78.26:1091,78,0	1/1:0,41:41:99:1595,114,0	1/1:0,30:30:84.28:1174,84,0	1/1:0,26:26:72.24:1006,72,0	1/1:0,28:28:84.28:1175,84,0	1/1:0,26:26:69.23:965,69,0	1/1:0,20:20:57.19:797,57,0	1/1:0,32:32:96.32:1342,96,0	1/1:0,8:8:21.07:294,21,0
chr10	43233397	.	GCT	G	11830.72	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=10.375;DP=726;FS=4.142;HRun=0;HaplotypeScore=104.7998;InbreedingCoeff=0.9993;MQ=94.17;MQ0=0;MQRankSum=-3.878;QD=36.40;ReadPosRankSum=2.549;VQSLOD=6.5902;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,148,2633	0/0:11,0:11:33.11:0,33,594	0/0:35,0:35:89:0,89,1474	0/0:32,0:32:77.57:0,78,1233	0/0:15,0:15:45.15:0,45,772	0/0:22,0:22:60.16:0,60,1036	0/0:32,0:32:96.28:0,96,1635	1/1:2,36:38:99:1492,108,0	0/0:19,0:19:57.20:0,57,1026	1/1:2,23:25:66.22:923,66,0	1/1:2,16:18:47.98:648,48,0	0/0:31,0:31:90.31:0,90,1620	0/0:21,0:21:63.22:0,63,1134	0/0:24,0:24:63.18:0,63,1073	1/1:3,39:42:99:1596,114,0	1/1:1,32:33:81.27:1134,81,0	0/0:28,0:28:69.24:0,69,1237	1/1:0,24:24:60.20:835,60,0	1/1:1,21:22:63.21:881,63,0	1/1:0,18:18:51.17:714,51,0	1/1:3,38:41:99:1470,105,0	0/0:30,0:30:90.31:0,90,1593	0/0:15,0:15:42.14:0,42,752	0/0:33,0:33:90.31:0,90,1604	1/1:1,25:26:63.21:882,63,0	1/1:0,14:14:42.14:588,42,0	1/1:2,11:13:27.09:378,27,0	1/1:2,9:11:21.07:289,21,0
chr10	43233575	.	T	TC	21734.58	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-3.656;DP=594;FS=1.086;HRun=0;HaplotypeScore=100.7092;InbreedingCoeff=0.9929;MQ=74.94;MQ0=0;MQRankSum=-6.310;QD=40.78;ReadPosRankSum=2.938;VQSLOD=5.1407;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,39:43:99:1634,111,0	1/1:1,5:6:15.05:228,15,0	0/0:9,0:9:24.03:0,24,283	0/0:19,0:19:44.12:0,44,515	1/1:2,22:24:54.01:755,54,0	1/1:0,16:16:48.16:732,48,0	1/1:2,25:27:78.22:1164,78,0	1/1:1,22:23:66.19:951,66,0	1/1:4,17:21:60.20:898,60,0	1/1:2,19:21:63.18:939,63,0	1/1:1,20:21:56.94:780,57,0	1/1:2,25:27:78.20:1160,78,0	1/1:4,17:21:60.13:889,60,0	1/1:2,19:21:63.18:914,63,0	1/1:3,25:28:84.24:1210,84,0	1/1:5,31:36:99:1494,102,0	0/0:33,0:33:96.23:0,96,1254	1/1:1,18:19:54.16:802,54,0	1/1:4,13:18:54.10:728,54,0	1/1:1,14:15:42.14:640,42,0	1/1:2,15:16:47.11:645,47,0	1/1:2,21:23:66.13:958,66,0	1/1:4,16:20:57.08:796,57,0	1/1:4,18:22:53.69:732,54,0	1/1:3,16:19:54.04:767,54,0	1/1:3,20:23:63.17:920,63,0	1/1:0,13:14:42.14:633,42,0	1/1:0,8:8:24.08:367,24,0
chr10	43233628	.	A	ATCCC	31905.35	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-4.303;DP=602;FS=0.430;HRun=0;HaplotypeScore=123.9232;InbreedingCoeff=0.9879;MQ=77.22;MQ0=0;MQRankSum=-11.265;QD=62.81;ReadPosRankSum=2.795;VQSLOD=6.8751;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,27:36:87.28:2253,87,0	1/1:3,6:9:27.02:568,27,0	0/0:28,0:28:75.61:0,76,1207	0/0:21,0:22:45.85:0,46,889	1/1:2,28:30:60.05:1533,60,0	1/1:4,13:17:48.15:1138,48,0	1/1:4,19:26:57.20:1470,57,0	1/1:8,15:26:57.17:1329,57,0	1/1:1,23:24:69.24:1795,69,0	1/1:5,17:24:69.23:1703,69,0	1/1:5,11:16:39.12:974,39,0	1/1:6,18:24:60.21:1513,60,0	1/1:0,16:16:48.16:1276,48,0	1/1:4,18:22:66.21:1638,66,0	1/1:6,14:19:47.20:1212,47,0	1/1:6,19:25:66.21:1690,66,0	0/0:44,0:44:99:0,126,2248	1/1:4,20:24:66.09:1525,66,0	1/1:6,12:22:60.18:1405,60,0	1/1:2,10:14:27.09:688,27,0	1/1:2,13:16:27.09:696,27,0	1/1:2,16:19:51.09:1241,51,0	1/1:2,17:20:48.16:1275,48,0	1/1:2,15:17:39.13:1036,39,0	1/1:1,18:19:57.20:1475,57,0	1/1:9,13:22:57.01:1212,57,0	1/1:4,11:15:39.12:941,39,0	1/1:0,4:4:12.04:319,12,0
chr10	43233705	.	A	AGCT	23149.58	PASS	AB=1.000;AC=51;AF=0.911;AN=56;BaseQRankSum=-9.399;DP=640;FS=1.740;HRun=0;HaplotypeScore=98.0950;InbreedingCoeff=0.8436;MQ=73.73;MQ0=0;MQRankSum=-3.706;QD=40.33;ReadPosRankSum=0.550;VQSLOD=6.1041;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:17,29:46:84.76:1719,85,0	1/1:4,5:9:12.04:249,12,0	0/1:17,0:17:3.43:3,0,318	0/0:20,0:20:30.75:0,31,405	1/1:7,9:16:30.10:606,30,0	1/1:5,17:23:45.15:930,45,0	1/1:5,26:31:72.25:1492,72,0	1/1:13,14:27:42.14:852,42,0	1/1:3,12:15:36.12:746,36,0	1/1:6,15:21:54.17:1044,54,0	1/1:6,11:17:24.08:497,24,0	1/1:5,22:28:57.20:1180,57,0	1/1:7,13:20:42.14:857,42,0	1/1:2,16:18:48.16:995,48,0	1/1:7,15:22:45.15:901,45,0	1/1:1,19:21:48.16:995,48,0	0/0:46,0:46:99:0,111,1595	1/1:1,21:22:66.23:1368,66,0	1/1:10,12:23:42.14:853,42,0	1/1:9,11:20:36.12:734,36,0	1/1:9,14:23:45.59:870,46,0	1/1:8,15:23:45.14:894,45,0	1/1:11,13:24:42.14:849,42,0	1/1:4,18:22:48.16:994,48,0	1/1:8,11:19:39.10:733,39,0	1/1:16,18:34:54.17:1051,54,0	1/1:3,22:26:63.22:1306,63,0	1/1:1,6:7:21.07:433,21,0
chr10	43235123	.	AACTATAGGGTAG	A	8769.89	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=13.796;DP=655;FS=0.445;HRun=0;HaplotypeScore=224.7678;InbreedingCoeff=0.9954;MQ=85.94;MQ0=0;MQRankSum=-13.205;QD=101.98;ReadPosRankSum=1.408;VQSLOD=4.7665;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,150,8175	0/0:18,0:18:54.16:0,54,3023	0/0:26,0:26:78.18:0,78,3730	0/0:21,0:21:59.94:0,60,2933	0/0:25,0:25:75.24:0,75,4459	0/0:25,0:25:75.22:0,75,4033	0/0:24,0:24:72.25:0,72,4264	0/0:33,0:33:99:0,99,5411	0/0:22,0:22:66.23:0,66,4020	1/1:0,11:11:33.10:1075,33,0	1/1:0,8:7:18.06:664,18,0	0/0:32,0:32:90.31:0,90,5409	0/0:27,0:27:81.28:0,81,4933	0/0:23,0:23:66.21:0,66,3915	1/1:0,14:14:33.11:1302,33,0	1/1:0,14:14:42.14:1652,42,0	0/0:44,0:44:99:0,132,7612	1/1:0,7:7:18.06:712,18,0	0/0:19,0:19:57.20:0,57,3268	0/0:28,0:28:84.25:0,84,4628	0/0:45,0:45:99:0,135,7371	0/0:10,0:10:30.10:0,30,1880	0/0:17,0:17:51.18:0,51,3092	0/0:46,0:46:99:0,138,8079	1/1:0,17:17:45.10:1653,45,0	1/1:0,15:15:45.15:1710,45,0	0/0:28,0:28:81.24:0,81,4458	0/0:6,0:6:18.06:0,18,1145
chr10	43236401	.	TC	T	102.65	PASS	AC=2;AF=0.038;AN=52;BaseQRankSum=1.479;DP=316;FS=0.000;HRun=6;HaplotypeScore=63.5048;InbreedingCoeff=0.5779;MQ=90.91;MQ0=0;MQRankSum=-0.667;QD=6.42;ReadPosRankSum=0.177;VQSLOD=-0.5024;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,7:16:17.97:192,18,0	./.	0/0:26,0:25:49.52:0,50,624	0/0:24,0:23:54.17:0,54,681	0/0:5,0:5:3.01:0,3,39	0/0:8,0:8:18.02:0,18,217	0/0:27,0:27:52.03:0,52,618	0/0:20,0:20:30.04:0,30,361	0/0:11,0:11:23.94:0,24,260	0/0:6,0:6:6.01:0,6,68	0/0:6,0:6:12.04:0,12,158	0/0:13,1:14:17.95:0,18,235	0/0:12,0:12:16.74:0,17,128	0/0:7,0:7:18.03:0,18,204	0/0:11,0:11:27.08:0,27,336	0/0:13,0:13:31.65:0,32,397	0/0:24,0:24:66.21:0,66,867	0/0:6,0:6:11.84:0,12,124	0/0:10,0:10:11.99:0,12,137	0/0:6,0:6:5.88:0,6,78	0/0:18,0:18:35.24:0,35,453	0/0:7,0:7:17.62:0,18,123	0/0:3,0:3:0:0,0,0	0/0:12,0:12:14.64:0,15,196	0/0:2,0:2:5.99:0,6,61	0/0:10,0:10:15.04:0,15,197	0/0:9,0:9:23.29:0,23,276	./.
chr10	43236627	.	AG	A	2638	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=8.651;DP=548;FS=2.134;HRun=2;HaplotypeScore=53.5637;InbreedingCoeff=0.9292;MQ=74.71;MQ0=0;MQRankSum=-0.606;QD=31.78;ReadPosRankSum=-0.125;VQSLOD=3.1556;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,102,1507	1/1:1,5:6:6.48:183,6,0	0/0:8,0:8:24.04:0,24,323	0/0:11,0:11:23.73:0,24,304	0/0:4,0:4:9.01:0,9,113	1/1:0,9:9:24.08:311,24,0	1/1:1,30:31:78.25:1012,78,0	0/0:30,0:30:90.26:0,90,1272	1/1:0,37:37:98.89:1285,99,0	0/0:21,0:21:63.21:0,63,928	0/0:5,0:5:15.05:0,15,224	0/0:32,0:32:96.32:0,96,1427	0/0:22,0:22:63.21:0,63,940	0/0:24,0:24:72.23:0,72,1056	0/0:29,0:29:87.29:0,87,1301	0/0:21,0:21:63.21:0,63,941	0/0:32,0:32:96.33:0,96,1437	0/0:29,0:29:87.29:0,87,1292	0/0:16,0:16:48.15:0,48,692	0/0:8,0:8:24.08:0,24,360	0/0:53,0:53:99:0,153,2253	0/0:3,0:3:9.02:0,9,115	0/0:6,0:6:18.06:0,18,269	0/0:31,0:30:93.32:0,93,1393	0/0:8,0:8:21.07:0,21,312	0/0:13,0:13:39.13:0,39,566	0/0:18,0:18:51.17:0,51,760	0/0:6,0:6:18.05:0,18,250
chr10	43237052	.	C	CG	851.09	PASS	AB=1.000;AC=9;AF=0.167;AN=54;BaseQRankSum=-6.205;DP=346;FS=6.022;HRun=8;HaplotypeScore=42.5831;InbreedingCoeff=0.7598;MQ=83.17;MQ0=0;MQRankSum=-2.486;QD=16.69;ReadPosRankSum=-1.724;VQSLOD=2.7808;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:56.99:0,57,515	1/1:2,1:3:6:58,6,0	0/0:12,0:12:17.08:0,17,184	0/0:11,0:11:26.84:0,27,230	0/0:3,0:3:6.47:0,6,55	1/1:3,6:9:18.05:208,18,0	1/1:6,19:25:54.16:623,54,0	0/0:16,0:16:20.98:0,21,192	1/1:1,4:5:9.03:104,9,0	0/1:9,0:9:7.34:7,0,119	./.	0/0:16,0:16:38.97:0,39,349	0/0:3,0:3:6:0,6,55	0/0:11,0:11:30:0,30,271	0/0:9,0:9:23.99:0,24,215	0/0:12,0:11:33:0,33,298	0/0:31,0:32:77.06:0,77,691	0/0:27,0:29:70.06:0,70,608	0/0:6,0:7:17.04:0,17,142	0/0:5,0:5:12.01:0,12,110	0/0:36,0:36:87.03:0,87,795	0/0:9,0:9:11.99:0,12,110	0/0:10,0:10:14.99:0,15,137	0/0:17,0:17:42.01:0,42,384	0/0:8,0:8:15:0,15,137	0/0:10,0:10:24:0,24,218	0/0:9,0:9:24.01:0,24,220	0/0:5,0:5:15.01:0,15,137
chr10	43238129	.	TTTCC	T	21782.77	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=6.769;DP=767;FS=1.977;HRun=0;HaplotypeScore=130.1333;InbreedingCoeff=0.9350;MQ=62.87;MQ0=3;MQRankSum=0.461;QD=31.75;ReadPosRankSum=4.310;VQSLOD=4.7963;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,25:29:60.21:1018,60,0	1/1:2,8:10:9.02:153,9,0	0/0:29,0:15:18.46:0,18,390	0/0:22,0:13:21.07:0,21,454	1/1:5,41:46:99:1803,123,0	1/1:0,15:15:36.12:611,36,0	1/1:2,25:27:57.20:967,57,0	1/1:13,14:27:25.05:505,25,0	1/1:3,15:18:36.12:611,36,0	1/1:5,26:31:81.24:1297,81,0	1/1:0,29:29:81.07:1275,81,0	1/1:11,26:37:57.19:967,57,0	1/1:5,23:28:51.17:864,51,0	1/1:8,21:29:39.13:661,39,0	1/1:8,21:29:42.14:713,42,0	1/1:6,26:31:42.14:713,42,0	0/0:30,0:30:81.22:0,81,1786	1/1:7,16:23:16.27:588,16,0	1/1:3,8:11:24:373,24,0	1/1:5,40:45:99:1636,108,0	1/1:4,28:32:60.21:1018,60,0	1/1:2,24:26:62.80:942,63,0	1/1:4,19:23:42.06:678,42,0	1/1:5,38:43:72.20:1190,72,0	1/1:4,19:23:51.17:861,51,0	1/1:6,33:39:99:1527,99,0	1/1:8,19:27:42.14:712,42,0	1/1:1,6:7:6.02:102,6,0
chr10	43238647	.	T	TAC	989.19	PASS	AB=1.000;AC=25;AF=0.658;AN=38;BaseQRankSum=-0.543;DP=290;FS=74.534;HRun=0;HaplotypeScore=53.4040;InbreedingCoeff=0.2691;MQ=31.73;MQ0=5;MQRankSum=-4.493;QD=5.72;ReadPosRankSum=3.896;VQSLOD=-0.1477;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:19:8.94:0,9,79	./.	./.	./.	./.	1/1:9,0:9:2.88:15,3,0	1/1:6,0:6:2.27:14,2,0	1/1:10,0:8:21.05:222,21,0	./.	1/1:7,1:8:16.60:214,17,0	./.	1/1:20,0:20:2.99:23,3,0	./.	0/1:17,0:16:0.41:0,0,32	./.	0/1:9,0:9:15.91:16,0,49	0/1:20,0:19:2.58:3,0,72	1/1:7,0:6:11.82:146,12,0	1/1:8,0:7:14.05:107,14,0	0/0:11,0:11:8.99:0,9,96	0/0:17,0:17:2.68:0,3,39	0/0:14,0:13:5.95:0,6,57	./.	0/1:23,0:22:10.19:11,0,10	1/1:10,2:12:2.84:14,3,0	1/1:11,0:11:25.16:239,25,0	1/1:2,1:3:2.09:52,2,0	0/1:9,0:8:44.64:45,0,111
chr10	43241592	.	AC	A	2310.10	PASS	AB=0.777;AC=50;AF=0.926;AN=54;BaseQRankSum=-1.722;DP=142;FS=36.672;HRun=3;HaplotypeScore=46.5195;InbreedingCoeff=0.0352;MQ=86.06;MQ0=1;MQRankSum=-3.501;QD=16.62;ReadPosRankSum=-0.143;VQSLOD=1.4014;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,5:8:17.88:137,18,0	./.	0/1:8,3:9:56.26:75,0,56	0/1:7,2:7:31.41:86,0,31	1/1:0,2:2:5.99:53,6,0	1/1:2,0:2:5.37:35,5,0	1/1:1,5:5:15:134,15,0	1/1:7,7:14:38.31:310,38,0	1/1:1,5:6:11.97:101,12,0	1/1:2,1:3:8.94:70,9,0	1/1:0,1:1:2.98:22,3,0	1/1:2,5:7:20.88:175,21,0	1/1:2,1:3:5.80:41,6,0	1/1:1,1:2:5.37:35,5,0	1/1:2,3:5:11.65:77,12,0	1/1:2,4:6:14.74:119,15,0	1/1:1,3:4:9:81,9,0	1/1:2,1:3:5.98:48,6,0	1/1:2,5:7:17.96:153,18,0	1/1:2,2:4:11.81:100,12,0	1/1:2,3:5:8.99:85,9,0	1/1:0,2:2:5.98:52,6,0	1/1:5,2:7:11.64:78,12,0	0/0:1,2:3:0.47:0,0,1	1/1:1,1:2:2.98:21,3,0	1/1:5,3:8:22.89:164,23,0	1/1:5,5:10:17.92:151,18,0	1/1:0,0:1:2.50:9,2,0
chr10	43241593	.	C	CCA	4175.65	PASS	AB=0.846;AC=50;AF=0.926;AN=54;BaseQRankSum=-2.382;DP=141;FS=37.590;HRun=0;HaplotypeScore=42.5865;InbreedingCoeff=0.0092;MQ=86.13;MQ0=1;MQRankSum=-3.501;QD=30.26;ReadPosRankSum=-0.258;VQSLOD=2.1273;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,3:8:17.97:218,18,0	./.	0/1:9,2:9:87.66:130,0,88	0/1:9,2:8:41.78:165,0,42	1/1:2,0:2:6.02:112,6,0	1/1:0,2:2:6.02:114,6,0	1/1:6,0:5:15.02:159,15,0	1/1:8,6:14:39.06:559,39,0	1/1:6,0:6:12:160,12,0	1/1:1,2:3:9.03:144,9,0	1/1:1,0:1:3.01:56,3,0	1/1:7,0:7:20.91:244,21,0	1/1:1,2:3:6.01:86,6,0	1/1:1,1:2:6:82,6,0	1/1:3,2:5:11.84:121,12,0	1/1:4,1:5:15.01:171,15,0	1/1:4,0:4:9.01:89,9,0	1/1:1,2:3:6.01:84,6,0	1/1:7,0:7:18.03:230,18,0	1/1:2,2:4:12.03:149,12,0	1/1:3,2:5:9.03:131,9,0	1/1:2,0:2:6.02:114,6,0	1/1:4,3:7:12.51:228,13,0	0/0:2,1:3:0.05:0,0,0	1/1:1,0:1:3.01:58,3,0	1/1:3,5:8:24.04:364,24,0	1/1:6,4:10:17.80:150,18,0	1/1:0,0:1:3.01:57,3,0
chr10	43241596	.	AC	A	1909.85	PASS	AB=0.923;AC=50;AF=0.926;AN=54;BaseQRankSum=-2.188;DP=132;FS=42.035;HRun=3;HaplotypeScore=46.6383;InbreedingCoeff=0.1216;MQ=87.73;MQ0=1;MQRankSum=-2.533;QD=14.81;ReadPosRankSum=0.614;VQSLOD=0.8413;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,4:8:17.79:127,18,0	./.	0/1:11,0:9:7.12:7,0,99	0/1:9,1:8:12.52:54,0,13	1/1:1,1:2:5.93:40,6,0	1/1:2,0:2:3.85:22,4,0	1/1:1,5:5:15:134,15,0	1/1:5,7:12:33.51:256,34,0	1/1:2,3:5:11.91:87,12,0	1/1:2,1:3:7.22:52,7,0	1/1:0,1:1:2.97:20,3,0	1/1:4,3:7:17.82:135,18,0	1/1:3,1:4:7.83:67,8,0	1/1:1,1:2:3.89:28,4,0	1/1:1,3:4:10.73:70,11,0	1/1:1,4:5:13.24:109,13,0	1/1:0,3:3:9:81,9,0	1/1:2,1:3:5.97:48,6,0	1/1:0,5:5:14.95:125,15,0	1/1:1,2:3:7.82:58,8,0	1/1:2,3:5:8.98:84,9,0	1/1:1,1:2:5.92:40,6,0	1/1:3,2:5:10.39:65,10,0	0/0:1,2:3:0.47:0,0,1	1/1:0,1:1:2.97:20,3,0	1/1:6,2:8:18.67:127,19,0	1/1:5,4:10:17.92:150,18,0	1/1:1,0:1:0.89:2,1,0
chr10	43241598	.	CCA	C	1119.38	PASS	AB=1.000;AC=50;AF=0.926;AN=54;BaseQRankSum=-1.982;DP=123;FS=48.408;HRun=0;HaplotypeScore=50.5842;InbreedingCoeff=0.3181;MQ=81.81;MQ0=1;MQRankSum=-3.347;QD=9.91;ReadPosRankSum=1.173;VQSLOD=0.9784;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,1:7:14.23:90,14,0	./.	0/0:10,0:8:14.93:0,15,140	0/1:9,0:6:26.41:26,0,27	1/1:2,0:2:2.77:22,3,0	1/1:2,0:2:4.79:26,5,0	1/1:6,0:5:13.75:61,14,0	1/1:12,0:12:25.74:120,26,0	1/1:4,0:4:5.16:19,5,0	1/1:3,0:3:6.98:27,7,0	1/1:1,0:1:2.99:24,3,0	1/1:4,2:6:15.28:107,15,0	1/1:3,0:3:8.94:68,9,0	1/1:2,0:2:5.77:33,6,0	1/1:4,0:4:9.33:45,9,0	1/1:5,0:5:14.14:79,14,0	1/1:3,0:3:8.24:38,8,0	1/1:2,0:2:3.26:10,3,0	1/1:5,0:5:9.08:37,9,0	1/1:3,0:3:8.66:48,9,0	1/1:5,0:5:8.78:53,9,0	1/1:3,0:3:0.20:1,0,0	1/1:5,0:5:10.71:72,11,0	0/1:3,0:3:0.01:0,0,0	1/1:1,0:1:0.47:1,0,0	1/1:7,1:8:18.69:119,19,0	1/1:7,1:8:14.79:84,15,0	1/1:1,0:1:2.97:20,3,0
chr10	43241605	.	T	TC	508.01	PASS	AB=1.000;AC=42;AF=0.875;AN=48;BaseQRankSum=-0.965;DP=88;FS=25.642;HRun=4;HaplotypeScore=41.5628;InbreedingCoeff=0.2800;MQ=91.22;MQ0=1;MQRankSum=-2.840;QD=6.77;ReadPosRankSum=1.246;VQSLOD=-0.7116;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,1:5:8.06:29,8,0	./.	0/1:10,0:7:21.39:21,0,41	0/0:10,0:7:3.29:0,3,55	1/1:1,0:1:0.89:2,1,0	./.	1/1:5,0:5:9.34:27,9,0	1/1:8,1:9:17.08:88,17,0	0/0:2,0:2:0.01:0,0,2	1/1:1,0:1:2.50:9,2,0	1/1:1,0:1:0.89:2,1,0	1/1:2,3:5:10.83:54,11,0	1/1:3,0:3:8.81:82,9,0	1/1:1,0:1:1.82:5,2,0	1/1:3,0:3:4.19:14,4,0	1/1:4,0:4:9.17:37,9,0	1/1:3,0:3:7.19:29,7,0	1/1:1,0:1:2.22:7,2,0	1/1:3,0:3:5.23:21,5,0	1/1:2,0:2:4.26:13,4,0	1/1:3,0:3:6.71:35,7,0	1/1:1,0:1:2.97:20,3,0	1/1:2,1:3:1.76:4,2,0	0/1:2,0:2:0:0,0,0	./.	1/1:2,1:3:8.53:48,9,0	1/1:5,1:6:11.83:60,12,0	./.
chr10	43241629	.	C	CGTTT	298.69	PASS	AC=2;AF=0.050;AN=40;BaseQRankSum=-0.188;DP=116;FS=4.674;HRun=0;HaplotypeScore=35.5212;InbreedingCoeff=0.4507;MQ=106.52;MQ0=0;MQRankSum=-3.919;QD=33.19;ReadPosRankSum=-2.413;VQSLOD=2.5303;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,5:9:18.06:386,18,0	./.	0/0:11,0:10:18.06:0,18,327	0/0:11,0:9:21.07:0,21,349	./.	./.	0/0:13,0:13:36.12:0,36,672	0/0:6,0:6:9.02:0,9,139	0/0:5,0:5:12.04:0,12,218	./.	./.	0/0:6,0:6:15.04:0,15,249	0/0:5,0:5:12:0,12,188	0/0:4,0:4:9.03:0,9,157	0/0:3,0:3:9.03:0,9,152	0/0:5,0:5:15.04:0,15,237	0/0:7,0:7:18.06:0,18,336	0/0:3,0:3:9.03:0,9,153	0/0:8,0:8:24.08:0,24,439	./.	0/0:6,0:6:15.05:0,15,279	0/0:2,0:2:3.01:0,3,56	./.	0/0:3,0:3:8.99:0,9,103	0/0:2,0:2:3.01:0,3,56	0/0:2,0:2:3.01:0,3,52	0/0:3,0:3:9.03:0,9,168	./.
chr10	43241847	.	C	CT	488.72	PASS	AB=0.749;AC=14;AF=0.250;AN=56;BaseQRankSum=4.368;DP=219;FS=47.567;HRun=0;HaplotypeScore=49.2038;InbreedingCoeff=-0.2682;MQ=68.93;MQ0=8;MQRankSum=-5.619;QD=6.52;ReadPosRankSum=-5.613;VQSLOD=0.8888;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:12,4:15:25.12:25,0,422	1/1:2,0:2:2.96:19,3,0	0/0:33,0:11:22.84:0,23,256	0/0:36,0:14:23.65:0,24,171	0/0:4,0:4:2.94:0,3,42	0/1:3,3:6:30.68:86,0,31	0/1:4,1:4:25.88:26,0,71	0/0:16,1:15:21.17:0,21,524	0/1:6,1:7:33.62:34,0,114	0/1:3,2:5:68.71:94,0,69	0/0:7,0:7:15.04:0,15,192	0/1:4,1:5:34.37:34,0,113	0/0:1,0:1:3.01:0,3,42	0/1:1,2:3:32.91:83,0,33	0/1:3,3:6:32.98:54,0,33	0/0:4,0:4:12.04:0,12,167	0/0:11,0:11:26.30:0,26,342	0/0:1,0:1:3.01:0,3,42	0/1:2,1:3:37.72:38,0,75	0/0:3,0:3:6.02:0,6,84	0/0:9,2:11:15.05:0,15,209	0/0:4,3:7:12.04:0,12,167	0/0:3,2:4:6.02:0,6,84	0/1:7,2:9:50.15:50,0,143	0/1:4,1:5:11.76:12,0,19	0/0:3,0:3:9.03:0,9,126	0/1:1,2:3:32.90:83,0,33	0/0:1,0:1:3.01:0,3,42
chr10	43241855	.	C	CCCCTCTCCCCT	4178.83	PASS	AC=48;AF=0.889;AN=54;BaseQRankSum=0.776;DP=231;FS=0.000;HRun=0;HaplotypeScore=74.8259;InbreedingCoeff=0.4803;MQ=62.04;MQ0=9;MQRankSum=-2.849;QD=30.50;ReadPosRankSum=0.442;VQSLOD=2.1813;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,1:12:27.09:469,27,0	1/1:2,0:2:3.01:55,3,0	0/0:36,0:10:20.84:0,21,293	0/0:40,0:18:13.94:0,14,163	1/1:4,1:5:2.02:95,2,0	1/1:5,1:6:15.05:327,15,0	1/1:4,0:3:9.03:167,9,0	1/1:15,0:13:24.06:413,24,0	1/1:9,0:8:15.04:217,15,0	1/1:7,0:7:4.70:294,5,0	1/1:5,0:5:8.99:128,9,0	1/1:6,0:6:12.04:261,12,0	1/1:1,0:1:3.01:113,3,0	1/1:4,0:4:9.03:197,9,0	1/1:8,0:8:15.51:228,16,0	1/1:4,0:4:12:147,12,0	0/0:16,0:16:39.08:0,39,694	./.	1/1:3,0:3:3.01:83,3,0	1/1:3,0:3:3.01:92,3,0	1/1:12,0:12:6:98,6,0	1/1:5,1:6:9.03:196,9,0	1/1:5,0:4:3.01:88,3,0	1/1:7,0:8:8.94:141,9,0	1/1:3,0:3:3.01:53,3,0	1/1:5,0:5:9.02:121,9,0	1/1:2,0:2:6.02:165,6,0	1/1:1,0:1:3.01:32,3,0
chr10	43241870	.	T	TC	3654.99	PASS	AB=0.756;AC=43;AF=0.768;AN=56;BaseQRankSum=-3.098;DP=252;FS=35.718;HRun=4;HaplotypeScore=51.9099;InbreedingCoeff=0.4744;MQ=62.09;MQ0=8;MQRankSum=-2.105;QD=22.42;ReadPosRankSum=-0.657;VQSLOD=1.2723;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,13:15:17.99:357,18,0	1/1:1,1:2:3.01:41,3,0	0/0:31,0:12:26.58:0,27,265	0/0:36,0:20:28.41:0,28,251	1/1:3,5:8:8.96:100,9,0	1/1:3,6:9:18.06:246,18,0	1/1:3,7:9:11.36:162,11,0	1/1:8,6:13:10.20:229,10,0	1/1:5,3:7:15.05:200,15,0	1/1:0,7:7:21.07:287,21,0	0/1:2,2:4:2.99:73,0,3	1/1:1,4:5:3.57:153,4,0	0/1:2,0:2:6.57:33,0,7	1/1:0,4:4:12.04:164,12,0	1/1:1,8:9:12.04:164,12,0	1/1:1,3:4:9.03:123,9,0	0/0:16,0:16:47.81:0,48,521	1/1:0,4:4:6.02:82,6,0	1/1:0,2:2:6.02:82,6,0	0/0:1,1:2:2.60:0,3,10	1/1:1,16:17:15.05:204,15,0	1/1:1,8:9:7.45:202,7,0	1/1:2,4:5:0.95:112,1,0	1/1:1,10:11:21.07:285,21,0	0/1:1,2:3:27.93:35,0,28	1/1:1,5:6:15.05:205,15,0	1/1:0,3:3:9.03:118,9,0	0/0:2,0:2:2.97:0,3,20
chr10	43242198	.	CT	C	5161.13	PASS	AB=0.830;AC=25;AF=0.446;AN=56;BaseQRankSum=8.910;DP=662;FS=2.820;HRun=10;HaplotypeScore=79.4866;InbreedingCoeff=0.8414;MQ=67.73;MQ0=10;MQRankSum=-0.815;QD=15.88;ReadPosRankSum=2.302;VQSLOD=5.4555;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,32:34:86.98:755,87,0	1/1:0,4:4:12:104,12,0	0/1:47,1:16:2.68:3,0,186	0/0:38,0:21:12.85:0,13,168	1/1:1,17:18:44.97:390,45,0	1/1:1,17:18:44.99:391,45,0	1/1:1,20:21:53.99:468,54,0	0/0:36,1:38:51.56:0,52,885	1/1:2,22:24:62.98:545,63,0	0/1:18,2:20:3.63:4,0,414	0/0:20,0:20:51.13:0,51,554	0/1:9,17:27:4.18:184,0,4	1/1:3,19:22:50.99:443,51,0	1/1:0,17:17:47.99:417,48,0	0/0:25,0:25:63.16:0,63,689	0/0:32,0:33:81.05:0,81,877	0/0:25,0:26:72:0,72,765	0/0:20,1:21:31.10:0,31,571	0/0:29,0:29:57.10:0,57,606	0/0:17,0:17:51.14:0,51,559	0/0:24,0:24:63.15:0,63,687	1/1:3,15:18:41.99:365,42,0	1/1:3,26:28:68.88:598,69,0	1/1:2,22:24:56.98:495,57,0	0/0:12,0:12:33.09:0,33,363	0/0:27,0:27:72.19:0,72,787	0/0:20,0:20:54.15:0,54,597	0/0:7,0:7:21.01:0,21,212
chr10	43244402	.	CTAAGCAAGCTGGAGGACCTGGGT	C	12502.39	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=13.156;DP=669;FS=0.000;HRun=0;HaplotypeScore=389.2827;InbreedingCoeff=0.9675;MQ=80.27;MQ0=0;MQRankSum=-13.245;QD=121.38;ReadPosRankSum=6.994;VQSLOD=3.0643;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,102,8806	0/0:12,0:12:33.09:0,33,2785	0/0:27,0:27:78.26:0,78,4927	0/0:20,0:20:54.18:0,54,3407	0/0:23,0:23:66.23:0,66,6023	0/0:21,0:21:60:0,60,5692	0/0:27,0:27:78.27:0,78,7580	0/0:23,0:23:63.22:0,63,5641	0/0:25,0:25:72.25:0,72,6446	0/0:32,0:32:96.33:0,96,8956	0/0:16,0:16:48.16:0,48,4899	1/1:1,25:26:66.23:4236,66,0	1/1:0,19:19:48.04:3081,48,0	1/1:3,17:20:42.14:2634,42,0	0/0:33,0:32:99:0,99,9538	0/0:28,0:28:84.29:0,84,8062	0/0:36,0:36:99:0,108,10137	0/0:22,0:22:66.23:0,66,6768	0/0:16,0:16:48.16:0,48,3345	0/0:17,0:17:48.16:0,48,4878	0/0:42,0:42:99:0,123,11714	1/1:4,13:17:24.08:1398,24,0	1/1:5,3:8:5.06:384,5,0	1/1:5,8:13:12.04:770,12,0	0/0:23,0:23:66.22:0,66,5917	0/0:36,0:36:96.33:0,96,8983	0/0:35,0:34:99:0,105,9513	0/0:18,0:18:48.16:0,48,4896
chr10	43246716	.	AGTGTGTGTGTGTGTGTGTGTGTGT	A	10534.64	PASS	AB=0.636;AC=37;AF=0.661;AN=56;BaseQRankSum=8.857;DP=600;FS=17.310;HRun=0;HaplotypeScore=270.0321;InbreedingCoeff=0.5419;MQ=57.70;MQ0=26;MQRankSum=-4.549;QD=26.81;ReadPosRankSum=-0.065;VQSLOD=1.8526;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:20:30.57:0,31,1289	0/0:5,0:5:3.01:0,3,301	0/0:36,0:7:2.98:0,3,21	0/0:52,0:12:3.26:0,3,12	1/1:8,13:21:14.98:620,15,0	0/0:21,0:20:42.13:0,42,2914	0/0:19,0:19:28.91:0,29,1979	1/1:19,10:29:30.93:394,31,0	0/0:14,0:20:27.06:0,27,1414	1/1:6,17:23:17.46:831,17,0	1/1:5,5:10:6.02:376,6,0	1/1:14,0:25:9.03:503,9,0	1/1:10,0:22:9.03:503,9,0	1/1:8,0:20:14.86:837,15,0	1/1:8,14:22:20.96:995,21,0	0/1:13,12:25:99:738,0,285	0/0:19,0:31:27.09:0,27,2026	0/1:8,9:17:99:182,0,159	1/1:11,6:16:15.03:200,15,0	1/1:6,8:14:16.39:770,16,0	1/1:31,0:29:3.01:37,3,0	0/1:6,0:22:21.12:820,0,21	1/1:5,0:11:6.02:335,6,0	1/1:14,0:30:9.03:503,9,0	1/1:6,6:12:3.01:188,3,0	1/1:6,9:15:24.06:384,24,0	1/1:8,12:20:18.53:1130,19,0	1/1:1,3:4:3.01:188,3,0
chr10	43248003	.	A	AG	92.57	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=1.182;DP=563;FS=1.548;HRun=7;HaplotypeScore=63.1438;InbreedingCoeff=0.6718;MQ=87.55;MQ0=0;MQRankSum=-2.117;QD=7.71;ReadPosRankSum=0.598;VQSLOD=0.3459;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:60.05:0,60,566	0/0:7,0:7:3:0,3,29	0/0:20,0:20:29.25:0,29,240	0/0:21,0:21:27.15:0,27,323	1/1:2,10:12:15.05:181,15,0	0/0:24,0:24:48.05:0,48,458	0/0:20,0:20:48.04:0,48,455	0/0:24,0:25:59.12:0,59,556	0/0:20,0:20:57.09:0,57,550	0/0:14,0:14:30.03:0,30,281	0/0:6,0:6:6:0,6,58	0/0:27,0:27:72.11:0,72,694	0/0:25,0:25:66.09:0,66,631	0/0:22,0:22:60.08:0,60,574	0/0:36,0:36:93.12:0,93,887	0/0:25,0:25:69.09:0,69,656	0/0:28,0:28:69.10:0,69,665	0/0:38,0:38:99:0,105,1013	0/0:19,0:19:48.05:0,48,455	0/0:7,0:7:12.02:0,12,116	0/0:52,0:52:99:0,123,1188	0/0:7,0:7:18.03:0,18,174	0/0:11,0:11:20.98:0,21,189	0/0:31,0:31:87.14:0,87,840	0/0:5,0:5:9.01:0,9,87	0/0:12,0:12:24.01:0,24,227	0/0:20,0:20:42.05:0,42,403	0/0:5,0:5:8.99:0,9,81
chr10	43249439	.	CG	C	9342.21	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=12.128;DP=510;FS=2.881;HRun=6;HaplotypeScore=77.6024;InbreedingCoeff=0.9831;MQ=77.57;MQ0=0;MQRankSum=-0.811;QD=25.81;ReadPosRankSum=2.932;VQSLOD=5.1718;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,29:30:72.18:773,72,0	0/0:5,0:5:15.05:0,15,197	0/0:11,0:10:12.02:0,12,131	0/0:20,0:20:39.78:0,40,485	0/0:6,0:6:18.06:0,18,236	0/0:18,0:18:45.15:0,45,592	0/0:27,0:27:75.22:0,75,958	1/1:1,12:13:33.04:339,33,0	0/0:32,0:32:81.19:0,81,996	1/1:4,10:14:33.06:343,33,0	1/1:1,10:11:21.05:226,21,0	1/1:3,28:31:72.18:773,72,0	1/1:4,19:23:54.05:564,54,0	1/1:2,19:21:45.11:483,45,0	1/1:0,18:18:51.13:548,51,0	1/1:3,14:17:45.11:483,45,0	0/0:29,0:29:84.26:0,84,1090	1/1:1,24:25:72.18:774,72,0	1/1:4,14:17:42.09:442,42,0	1/1:0,6:6:15.04:161,15,0	1/1:3,32:35:81.20:870,81,0	1/1:0,10:10:27.07:290,27,0	1/1:1,7:8:18.04:193,18,0	1/1:1,17:18:42.11:451,42,0	1/1:2,9:11:15.04:161,15,0	1/1:2,15:17:42.10:449,42,0	1/1:3,21:24:66.13:696,66,0	1/1:0,12:12:30.08:322,30,0
chr10	43251140	.	GGAC	G	3655.49	PASS	AB=0.586;AC=15;AF=0.268;AN=56;BaseQRankSum=16.999;DP=655;FS=10.114;HRun=0;HaplotypeScore=139.6701;InbreedingCoeff=0.8593;MQ=77.22;MQ0=0;MQRankSum=-17.152;QD=20.09;ReadPosRankSum=2.090;VQSLOD=3.0168;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:10,24:34:43.09:547,0,43	0/0:12,0:12:33.11:0,33,809	0/0:19,0:19:54.18:0,54,1199	0/0:17,0:17:51.08:0,51,990	1/1:4,13:17:6.08:141,6,0	0/0:28,0:28:84.29:0,84,2052	0/0:28,0:28:84.29:0,84,2009	0/0:24,0:24:69.23:0,69,1648	0/0:24,0:24:72.25:0,72,1721	0/0:27,0:27:81.28:0,81,1997	0/0:20,0:20:51.18:0,51,1243	1/1:3,19:22:57.58:572,58,0	1/1:5,24:29:47.56:777,48,0	1/1:3,21:24:29.30:586,29,0	0/0:25,0:25:75.20:0,75,1709	0/0:18,0:18:54.19:0,54,1331	0/0:35,0:35:99:0,105,2508	0/0:23,0:23:69.24:0,69,1647	0/0:22,0:22:66.22:0,66,1560	0/0:20,0:20:57.19:0,57,1382	0/0:44,0:44:99:0,132,3066	1/1:5,23:28:9.19:530,9,0	1/1:2,12:14:29.89:280,30,0	1/1:3,11:14:5.94:220,6,0	0/0:21,0:21:63.22:0,63,1489	0/0:25,0:25:75.22:0,75,1732	0/0:19,0:19:57.20:0,57,1367	0/0:22,0:22:60.20:0,60,1457
chr10	43251144	.	TCC	T	2698.51	PASS	AB=0.559;AC=15;AF=0.268;AN=56;BaseQRankSum=17.234;DP=648;FS=10.021;HRun=2;HaplotypeScore=129.0724;InbreedingCoeff=0.8339;MQ=79.78;MQ0=0;MQRankSum=-16.791;QD=15.25;ReadPosRankSum=1.511;VQSLOD=0.2387;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:7,26:33:24.02:429,0,24	0/0:11,0:11:33.11:0,33,664	0/0:20,0:20:28.88:0,29,953	0/0:20,0:20:57.16:0,57,1015	1/1:1,14:15:1.79:101,2,0	0/0:27,0:27:81.28:0,81,1635	0/0:27,0:27:81.23:0,81,1570	0/0:26,0:26:72.23:0,72,1369	0/0:24,0:24:72.25:0,72,1438	0/0:28,0:28:84.28:0,84,1662	0/0:20,0:20:57.16:0,57,1048	1/1:2,19:21:59.79:472,60,0	1/1:3,26:29:51.37:602,51,0	1/1:4,21:25:27.51:465,28,0	0/0:23,0:23:66.16:0,66,1229	0/0:20,0:20:60.17:0,60,1145	0/0:35,0:35:99:0,105,2131	0/0:22,0:22:63.22:0,63,1264	0/0:22,0:22:66.23:0,66,1327	0/0:20,0:20:57.14:0,57,1048	0/0:40,0:40:99:0,120,2423	1/1:3,23:26:22.54:427,23,0	1/1:2,12:14:29.68:220,30,0	1/1:2,12:14:2.52:169,3,0	0/0:20,0:20:60.21:0,60,1218	0/0:23,0:23:69.21:0,69,1260	0/0:21,0:21:63.22:0,63,1271	0/0:22,0:22:59.89:0,60,1217
chr10	43254645	.	T	TACACACACACACACACACACAC	9439.80	PASS	AB=0.615;AC=37;AF=0.685;AN=54;BaseQRankSum=5.429;DP=646;FS=3.981;HRun=0;HaplotypeScore=341.2942;InbreedingCoeff=0.7474;MQ=44.14;MQ0=15;MQRankSum=-7.972;QD=22.42;ReadPosRankSum=-1.998;VQSLOD=2.3986;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:23:2.42:108,2,0	0/0:6,0:7:15.05:0,15,637	0/0:34,0:14:9.03:0,9,330	0/0:42,0:24:7.48:0,7,130	1/1:20,0:24:18.33:481,18,0	0/0:15,0:17:36.12:0,36,1505	0/0:36,0:37:78.14:0,78,3137	1/1:19,0:18:21.94:507,22,0	0/0:25,0:25:51.17:0,51,2227	1/1:30,0:30:63.09:1487,63,0	0/0:14,0:13:0.47:0,0,1	1/1:30,0:28:21.05:911,21,0	1/1:16,0:15:13.26:447,13,0	1/1:22,0:20:3:25,3,0	1/1:23,0:24:6.96:177,7,0	1/1:29,0:29:27.09:730,27,0	0/0:31,0:35:84.26:0,84,3885	1/1:21,0:22:36.12:1283,36,0	1/1:15,0:16:30:915,30,0	./.	1/1:26,0:26:3.62:26,4,0	0/1:6,9:16:0:0,0,0	1/1:7,0:6:9:98,9,0	1/1:33,0:33:8.47:111,8,0	1/1:28,0:28:6.01:172,6,0	1/1:30,0:29:53.22:1315,53,0	1/1:17,0:15:15.52:514,16,0	1/1:2,0:2:3.01:132,3,0
chr10	43254668	.	ACGCATGCACGCGCGCG	A	4432.62	PASS	AB=0.965;AC=26;AF=0.481;AN=54;BaseQRankSum=-0.012;DP=668;FS=25.173;HRun=0;HaplotypeScore=288.5629;InbreedingCoeff=-0.0443;MQ=40.36;MQ0=21;MQRankSum=-4.876;QD=9.94;ReadPosRankSum=-4.526;VQSLOD=1.9481;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:22:2.36:108,2,0	0/0:8,0:8:24.08:0,24,1502	0/0:28,0:5:15.05:0,15,483	0/0:33,0:8:13.58:0,14,388	1/1:24,0:24:12.46:368,12,0	0/0:17,0:17:48.16:0,48,2637	0/0:39,0:39:99:0,111,5963	0/1:24,0:22:99:274,0,443	0/0:26,0:26:63.21:0,63,3596	0/1:34,0:33:99:615,0,515	1/1:9,0:8:0.47:2,0,0	0/1:28,5:29:99:330,0,1195	0/1:14,4:17:99:221,0,519	0/1:19,2:19:18.92:19,0,104	1/1:24,0:23:3.68:17,4,0	0/1:30,0:29:99:202,0,312	0/0:45,0:45:99:0,135,8396	0/1:22,0:21:99:615,0,153	0/1:19,0:18:74.78:75,0,265	./.	1/1:37,0:36:2.92:26,3,0	0/0:12,0:12:12.51:0,13,590	0/1:8,0:7:5.94:6,0,681	0/1:37,1:38:77.79:78,0,826	1/1:30,1:30:6.02:172,6,0	0/1:33,0:32:99:905,0,280	0/1:17,0:15:88.78:268,0,89	1/1:1,0:1:3.01:132,3,0
chr10	43254672	.	ATGCACGCGCGCG	A	2833.43	PASS	AB=0.932;AC=22;AF=0.407;AN=54;BaseQRankSum=5.004;DP=625;FS=18.289;HRun=0;HaplotypeScore=250.1578;InbreedingCoeff=0.0138;MQ=41.19;MQ0=23;MQRankSum=-6.196;QD=7.56;ReadPosRankSum=-3.705;VQSLOD=0.5528;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:21:10.15:10,0,96	0/0:9,0:9:27.09:0,27,1265	0/0:29,0:5:15.05:0,15,403	0/0:33,0:6:13.27:0,13,367	1/1:24,0:24:13.79:253,14,0	0/0:17,0:17:51.18:0,51,2275	0/0:37,0:37:99:0,107,4943	0/1:17,2:17:99:143,0,272	0/0:26,0:26:66.23:0,66,2954	0/1:29,0:30:99:453,0,152	1/1:7,1:7:0.47:2,0,0	0/1:29,4:29:99:261,0,869	0/1:15,1:15:99:151,0,408	0/0:16,3:17:6.02:0,6,160	0/1:19,1:19:0.42:0,0,2	0/1:27,0:26:99:125,0,137	0/0:45,0:45:99:0,135,6930	0/1:20,0:20:52.85:502,0,53	0/1:15,0:14:8.24:8,0,141	./.	1/1:27,2:29:0.52:2,1,0	0/0:11,1:11:12.51:0,13,414	0/0:9,1:9:18.01:0,18,574	0/1:31,1:34:14.12:14,0,687	1/1:29,0:28:6.02:121,6,0	0/1:29,1:30:99:591,0,120	0/1:9,4:12:2.86:240,0,3	1/1:0,1:1:3.01:114,3,0
chr10	43254676	.	ACG	A	1937.07	PASS	AB=0.966;AC=30;AF=0.577;AN=52;BaseQRankSum=8.232;DP=608;FS=1.004;HRun=0;HaplotypeScore=181.5743;InbreedingCoeff=0.3077;MQ=41.26;MQ0=20;MQRankSum=-5.423;QD=4.82;ReadPosRankSum=-1.685;VQSLOD=2.9005;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:21,0:20:0:0,0,0	0/0:9,0:9:23.68:0,24,333	0/1:26,0:5:0.84:1,0,18	0/0:30,0:5:6.88:0,7,38	0/1:21,0:21:0.23:0,0,1	0/0:17,0:17:35.99:0,36,501	0/0:36,0:36:42.97:0,43,1015	0/1:18,0:16:29.59:54,0,30	0/0:26,0:26:38.50:0,38,768	0/1:29,0:29:3:156,0,3	1/1:8,0:7:0.47:1,0,0	1/1:13,19:28:38.72:474,39,0	1/1:8,8:15:23.96:265,24,0	1/1:8,13:19:6.02:80,6,0	1/1:19,1:19:0.88:2,1,0	0/1:26,0:25:7.51:21,0,8	0/0:48,0:48:99:0,118,1967	0/1:21,0:20:10:10,0,103	1/1:14,0:14:24.29:139,24,0	./.	1/1:29,0:29:0.92:3,1,0	0/1:8,4:11:10.18:106,0,10	1/1:2,7:8:18.01:239,18,0	1/1:10,23:34:29.88:342,30,0	./.	0/1:27,0:27:32.25:154,0,32	0/1:14,0:13:3.03:34,0,3	1/1:1,0:1:2.92:17,3,0
chr10	43254678	.	G	GCA	1713.89	PASS	AB=1.000;AC=28;AF=0.519;AN=54;BaseQRankSum=11.033;DP=601;FS=5.520;HRun=0;HaplotypeScore=186.8936;InbreedingCoeff=0.5394;MQ=41.68;MQ0=17;MQRankSum=-8.418;QD=5.26;ReadPosRankSum=-1.150;VQSLOD=2.8542;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:12,9:20:10.53:75,11,0	0/0:11,0:11:30.08:0,30,419	0/0:25,0:6:14.98:0,15,134	0/0:28,0:5:8.63:0,9,74	1/1:22,0:22:1.54:7,2,0	0/0:17,0:17:47.93:0,48,619	0/0:36,0:36:99:0,105,1373	0/1:18,0:16:11.10:201,0,11	0/0:27,0:27:47.53:0,48,784	1/1:30,0:29:52.50:438,52,0	0/0:9,0:9:0.47:0,0,1	0/1:31,0:27:1.85:2,0,77	0/0:15,0:14:2.18:0,2,75	0/1:21,0:19:8.48:9,0,8	1/1:21,0:20:0.23:1,0,0	1/1:25,0:25:19.03:158,19,0	0/0:47,0:47:99:0,115,1903	1/1:20,0:20:22.59:179,23,0	1/1:10,1:11:30.05:342,30,0	./.	1/1:25,1:25:0.47:2,0,0	0/0:11,0:10:11.15:0,11,85	0/1:9,0:8:13.49:13,0,29	0/0:35,0:35:9.36:0,9,129	1/1:26,0:25:1.55:4,2,0	1/1:28,0:28:46.51:363,47,0	1/1:16,0:14:11.47:81,11,0	1/1:1,0:1:2.88:15,3,0
chr10	43254682	.	GCGCA	G	637.51	PASS	AB=0.921;AC=17;AF=0.304;AN=56;BaseQRankSum=7.917;DP=601;FS=12.518;HRun=0;HaplotypeScore=198.1112;InbreedingCoeff=0.0098;MQ=42.72;MQ0=15;MQRankSum=-7.750;QD=2.25;ReadPosRankSum=0.664;VQSLOD=1.9752;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:2.70:0,3,13	0/0:11,0:11:26.96:0,27,559	0/0:25,0:5:9.42:0,9,73	0/0:29,0:5:7.22:0,7,60	0/1:5,12:18:0.51:1,0,1	0/0:15,0:15:16.24:0,16,765	0/0:40,0:40:99:0,112,1823	0/1:9,0:19:58.01:58,0,67	0/0:26,0:26:63.03:0,63,1377	0/1:32,0:31:13.82:155,0,14	1/1:9,0:9:0.47:1,0,0	0/1:32,1:29:17.92:18,0,71	0/1:18,0:17:58.32:104,0,58	0/0:20,2:20:7.74:0,8,40	1/1:21,0:20:1.77:5,2,0	0/1:24,0:24:23.40:23,0,30	0/0:46,0:46:99:0,138,3211	0/1:19,0:19:7.18:7,0,145	0/1:11,0:11:0.48:106,0,0	0/0:13,0:12:2.99:0,3,23	0/0:26,0:25:0.94:0,1,2	0/0:10,1:10:10.32:0,10,74	0/0:9,0:9:17.21:0,17,71	0/1:31,3:34:84.42:84,0,163	0/0:25,0:24:2.92:0,3,17	0/1:26,0:26:83.49:152,0,83	0/1:16,0:14:2.21:45,0,2	1/1:1,0:1:2.92:17,3,0
chr10	43254684	.	GCACACA	G	2322.68	PASS	AB=0.824;AC=19;AF=0.339;AN=56;BaseQRankSum=9.401;DP=616;FS=22.630;HRun=0;HaplotypeScore=208.5832;InbreedingCoeff=0.2884;MQ=42.95;MQ0=15;MQRankSum=-7.312;QD=8.93;ReadPosRankSum=0.525;VQSLOD=1.3670;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:0.47:0,0,1	0/0:12,0:12:27.09:0,27,828	0/0:22,0:4:8.06:0,8,96	0/0:34,0:9:6.06:0,6,297	0/1:18,0:18:0.20:0,0,1	0/0:14,0:14:33.11:0,33,965	0/0:35,0:40:78.27:0,78,2290	0/1:21,0:19:53.49:139,0,53	0/0:26,0:27:63.21:0,63,1889	1/1:11,20:30:33.63:882,34,0	1/1:8,1:9:0.94:1,1,0	0/0:34,0:30:39.60:0,40,778	0/1:18,0:18:22.78:23,0,584	0/0:22,0:20:12.04:0,12,285	1/1:13,8:20:4.37:42,4,0	0/1:11,13:24:35.59:190,0,36	0/0:43,0:45:99:0,126,3896	0/1:16,7:23:99:141,0,285	0/1:10,3:12:13.89:152,0,14	1/1:14,0:13:2.01:22,2,0	0/0:13,16:28:0.94:0,1,2	0/0:11,0:10:12.04:0,12,278	0/0:10,0:10:24.07:0,24,512	0/0:34,0:35:41.45:0,41,830	1/1:8,16:24:2.90:16,3,0	0/1:8,18:26:15.61:679,0,16	1/1:9,7:14:8.98:192,9,0	0/0:1,0:1:0:0,0,0
chr10	43254690	.	A	ACGTG	1799.25	PASS	AB=0.976;AC=15;AF=0.268;AN=56;BaseQRankSum=9.530;DP=610;FS=16.817;HRun=0;HaplotypeScore=194.6571;InbreedingCoeff=0.2750;MQ=44.70;MQ0=15;MQRankSum=-7.428;QD=8.25;ReadPosRankSum=0.800;VQSLOD=1.2131;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:15.03:0,15,160	0/0:14,0:14:36.10:0,36,678	0/0:23,0:6:11.26:0,11,97	0/0:31,0:7:12.93:0,13,278	0/1:17,0:17:0.70:1,0,1	0/0:14,0:14:42.10:0,42,773	0/0:41,0:41:99:0,115,2102	0/1:21,0:19:99:143,0,282	0/0:27,0:27:66.23:0,66,1274	0/1:30,0:29:79.98:387,0,80	0/0:7,0:7:0.47:0,0,1	0/0:35,0:31:42.79:0,43,728	0/0:19,0:18:33.58:0,34,590	0/0:23,0:21:12.04:0,12,229	1/1:20,0:19:2.72:63,3,0	1/1:21,2:23:13.47:220,13,0	0/0:47,0:47:99:0,138,2708	0/1:19,2:21:99:239,0,146	0/1:10,0:10:99:231,0,116	1/1:12,0:11:5.89:87,6,0	0/0:29,2:30:2.41:0,2,58	0/0:11,0:10:11.64:0,12,224	0/0:10,0:10:23.96:0,24,441	0/0:37,0:37:48.09:0,48,855	1/1:24,0:23:3.01:47,3,0	0/1:23,0:23:31.75:529,0,32	0/1:16,0:14:4.10:4,0,32	0/0:1,0:1:1.55:0,2,4
chr10	43254694	.	A	ACGTGCG	1312.48	PASS	AB=0.963;AC=11;AF=0.196;AN=56;BaseQRankSum=8.361;DP=677;FS=1.172;HRun=0;HaplotypeScore=238.7028;InbreedingCoeff=0.0612;MQ=45.93;MQ0=13;MQRankSum=-7.453;QD=5.89;ReadPosRankSum=-2.625;VQSLOD=2.2053;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:17.56:0,18,245	0/0:14,0:14:36.07:0,36,825	0/0:21,0:7:17.63:0,18,194	0/0:34,0:11:27.05:0,27,483	0/0:17,0:17:0.94:0,1,3	0/0:12,0:12:36.12:0,36,862	0/0:46,0:46:99:0,129,2862	0/1:25,0:23:99:114,0,176	0/0:27,0:27:69.71:0,70,1639	0/1:33,0:32:99:99,0,404	0/0:10,1:11:3.47:0,3,26	0/0:36,0:32:46.49:0,46,980	0/0:20,0:19:36.58:0,37,767	0/0:24,0:22:18.05:0,18,348	1/1:22,1:23:2.68:32,3,0	0/1:20,4:25:99:192,0,106	0/0:51,0:51:99:0,144,3447	0/1:25,0:26:99:375,0,272	0/1:16,0:16:46.43:336,0,46	0/1:16,0:15:17.66:41,0,18	0/0:37,0:37:11.52:0,12,149	0/0:11,0:10:12.04:0,12,281	0/0:11,0:11:27.08:0,27,578	0/0:38,0:38:54.12:0,54,1183	1/1:25,2:26:2.51:7,3,0	0/1:31,0:31:99:256,0,161	0/0:20,0:18:4.03:0,4,134	0/0:1,0:1:0.89:0,1,2
chr10	43255453	.	ACGG	A	11655.06	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=13.447;DP=589;FS=6.624;HRun=0;HaplotypeScore=90.3810;InbreedingCoeff=0.9967;MQ=94.64;MQ0=0;MQRankSum=-7.546;QD=41.04;ReadPosRankSum=5.140;VQSLOD=6.1637;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,31:32:75.26:1264,75,0	0/0:13,0:13:36.10:0,36,715	0/0:29,0:29:81.28:0,81,1760	0/0:28,0:28:84.29:0,84,1829	0/0:7,0:7:21.07:0,21,484	0/0:27,0:27:75.26:0,75,1726	0/0:30,0:30:90.30:0,90,2012	1/1:5,22:27:66.19:1067,66,0	0/0:23,0:23:69.22:0,69,1519	1/1:0,12:12:36.07:558,36,0	1/1:3,20:23:51.17:869,51,0	0/0:27,0:27:78.27:0,78,1794	0/0:14,0:14:39.13:0,39,871	0/0:17,0:17:45.15:0,45,1034	1/1:1,19:20:51.17:869,51,0	1/1:2,21:23:60.21:1022,60,0	0/0:25,0:25:75.26:0,75,1727	1/1:2,17:19:42.14:716,42,0	1/1:1,19:20:54.18:917,54,0	1/1:1,19:20:45.15:767,45,0	1/1:0,26:26:57.20:972,57,0	0/0:14,0:14:42.14:0,42,964	0/0:16,0:16:45.12:0,45,929	0/0:35,0:35:99:0,105,2372	1/1:2,10:12:21.07:358,21,0	1/1:0,25:25:72.23:1201,72,0	1/1:3,17:20:48.16:818,48,0	1/1:0,5:5:15.05:256,15,0
chr10	43256646	.	TA	T	6883.74	PASS	AB=0.857;AC=43;AF=0.768;AN=56;BaseQRankSum=6.095;DP=591;FS=19.421;HRun=12;HaplotypeScore=69.7178;InbreedingCoeff=0.8924;MQ=83.13;MQ0=0;MQRankSum=-1.114;QD=14.90;ReadPosRankSum=2.401;VQSLOD=3.7956;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,23:33:60.31:452,60,0	0/1:5,1:6:5.20:5,0,134	0/0:13,0:14:17.67:0,18,204	0/0:24,1:25:20.58:0,21,205	1/1:6,17:24:40.67:323,41,0	0/0:17,1:18:18.83:0,19,363	0/0:16,0:16:33.01:0,33,317	1/1:5,20:26:52.78:398,53,0	0/0:20,3:23:13.65:0,14,502	1/1:6,18:24:23.25:357,23,0	1/1:4,10:15:28.91:215,29,0	1/1:3,26:29:77.63:599,78,0	1/1:6,13:21:39.91:290,40,0	1/1:7,13:21:50.74:386,51,0	1/1:7,21:30:24.48:353,24,0	1/1:2,13:15:8.41:248,8,0	0/0:33,0:33:69.08:0,69,679	1/1:6,18:25:55.80:424,56,0	1/1:8,7:15:24.18:172,24,0	1/1:8,12:21:31.86:238,32,0	1/1:3,25:29:43.32:509,43,0	1/1:5,12:19:9.47:237,9,0	1/1:6,13:19:35.82:279,36,0	1/1:2,18:22:48.89:360,49,0	1/1:3,14:18:36.94:267,37,0	1/1:3,17:20:47.80:372,48,0	1/1:5,14:19:29.81:232,30,0	1/1:2,8:11:22.94:168,23,0
chr10	43257213	.	CCA	C	1810.82	PASS	AB=1.000;AC=25;AF=0.446;AN=56;BaseQRankSum=10.580;DP=477;FS=17.128;HRun=0;HaplotypeScore=76.7356;InbreedingCoeff=0.6909;MQ=64.87;MQ0=0;MQRankSum=-7.707;QD=10.78;ReadPosRankSum=-8.176;VQSLOD=0.0873;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:20,2:21:53.75:463,54,0	0/0:6,0:6:18.06:0,18,298	0/0:20,0:19:47.89:0,48,655	0/0:12,0:10:30.05:0,30,436	0/0:17,0:17:43.48:0,43,210	0/0:21,0:21:60.20:0,60,1077	0/0:36,0:36:99:0,108,1793	1/1:12,2:14:29.86:261,30,0	0/0:20,0:20:57.18:0,57,988	0/1:13,0:13:21.37:21,0,30	0/1:7,0:7:11.27:25,0,11	0/0:31,0:31:93.29:0,93,1580	0/0:18,0:18:48.16:0,48,860	0/0:30,0:30:87.28:0,87,1461	1/1:10,0:10:1.72:4,2,0	1/1:11,0:11:0.42:14,0,0	0/0:32,0:32:96.28:0,96,1622	0/1:16,0:16:45.35:122,0,45	1/1:12,0:12:29.90:269,30,0	1/1:7,0:7:11.65:100,12,0	1/1:15,0:15:6.02:85,6,0	0/0:19,0:19:57.17:0,57,941	0/0:14,0:14:42.14:0,42,728	0/0:33,0:33:99:0,99,1577	1/1:11,0:11:8.37:59,8,0	1/1:10,0:10:15.83:123,16,0	1/1:16,0:16:22.59:368,23,0	1/1:4,0:4:11.99:101,12,0
chr10	43257348	.	TG	T	463.03	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=0.906;DP=649;FS=9.043;HRun=3;HaplotypeScore=80.5681;InbreedingCoeff=0.9978;MQ=87.56;MQ0=0;MQRankSum=-2.329;QD=25.72;ReadPosRankSum=1.502;VQSLOD=2.2017;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:84.21:0,84,1184	0/0:8,0:8:24.08:0,24,339	0/0:26,0:26:71.36:0,71,959	0/0:20,0:20:60.09:0,60,815	1/1:0,18:18:45.14:558,45,0	0/0:24,0:24:72.24:0,72,1030	0/0:27,0:27:81.26:0,81,1139	0/0:27,0:27:78.23:0,78,1083	0/0:32,0:32:93.31:0,93,1336	0/0:25,0:25:72.23:0,72,1009	0/0:12,0:12:36.12:0,36,512	0/0:28,0:28:84.26:0,84,1170	0/0:26,0:26:78.18:0,78,1077	0/0:14,0:14:42.13:0,42,589	0/0:18,0:18:54.18:0,54,777	0/0:14,0:14:42.14:0,42,604	0/0:50,0:50:99:0,150,2135	0/0:32,0:32:93.22:0,93,1272	0/0:20,0:20:57.17:0,57,801	0/0:21,0:21:63.21:0,63,906	0/0:28,0:28:81.27:0,81,1166	0/0:20,0:20:60.19:0,60,844	0/0:20,0:20:60.19:0,60,845	0/0:40,0:40:99:0,120,1689	0/0:17,0:17:51.16:0,51,715	0/0:19,0:19:54.18:0,54,778	0/0:20,0:20:57.19:0,57,820	0/0:15,0:15:45.14:0,45,630
chr10	43258263	.	C	CAGGG	39435.82	PASS	AB=0.933;AC=43;AF=0.768;AN=56;BaseQRankSum=4.602;DP=762;FS=1.807;HRun=0;HaplotypeScore=149.3933;InbreedingCoeff=0.8994;MQ=85.10;MQ0=0;MQRankSum=-13.472;QD=66.61;ReadPosRankSum=4.711;VQSLOD=6.9203;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,27:33:87.26:2367,87,0	0/1:13,1:14:41.60:42,0,737	0/0:34,0:34:93.32:0,93,1747	0/0:35,0:35:93.65:0,94,1803	1/1:4,23:29:69.24:1905,69,0	0/0:22,0:22:63.22:0,63,1248	0/0:25,0:25:75.20:0,75,1408	1/1:16,24:44:99:3103,126,0	0/0:19,0:19:57.18:0,57,1094	1/1:9,22:33:93.31:2377,93,0	1/1:5,13:21:33.11:907,33,0	1/1:5,23:29:78.16:2013,78,0	1/1:3,15:20:57.20:1518,57,0	1/1:2,25:29:81.28:2250,81,0	1/1:5,23:31:78.22:2026,78,0	1/1:5,17:24:66.23:1832,66,0	0/0:35,0:35:99:0,102,1957	1/1:2,20:27:60.21:1677,60,0	1/1:8,18:28:78.20:1963,78,0	1/1:5,22:28:72.25:1992,72,0	1/1:2,18:26:39.13:1089,39,0	1/1:3,21:24:66.22:1787,66,0	1/1:3,19:25:66.18:1760,66,0	1/1:5,23:29:62.47:1737,62,0	1/1:7,19:27:66.22:1741,66,0	1/1:8,25:33:93.32:2561,93,0	1/1:6,22:30:78.27:2164,78,0	1/1:1,7:8:24.08:626,24,0
chr10	43258530	.	C	CAT	15463.93	PASS	AB=1.000;AC=40;AF=0.714;AN=56;BaseQRankSum=5.745;DP=877;FS=5.158;HRun=0;HaplotypeScore=135.1870;InbreedingCoeff=0.8428;MQ=69.11;MQ0=11;MQRankSum=-3.436;QD=23.75;ReadPosRankSum=4.481;VQSLOD=5.7562;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:43,0:42:34.66:328,35,0	0/0:12,0:12:33.11:0,33,471	0/0:48,0:33:78.10:0,78,835	0/0:37,0:29:80.91:0,81,957	0/1:25,0:25:14.91:330,0,15	0/0:34,0:34:93.08:0,93,1105	0/0:33,0:33:86.92:0,87,1079	1/1:41,0:41:99:1038,106,0	0/0:29,0:29:78.13:0,78,1001	1/1:34,0:33:72.15:887,72,0	0/1:16,0:16:6.04:214,0,6	1/1:6,41:48:57.36:1385,57,0	1/1:2,30:33:63.22:1146,63,0	1/1:1,27:28:57.20:1043,57,0	1/1:32,0:32:63.18:717,63,0	1/1:28,0:28:46.17:583,46,0	0/0:33,0:33:96.16:0,96,1212	1/1:26,0:26:25.43:461,25,0	1/1:23,0:22:62.88:563,63,0	1/1:33,0:33:60.17:686,60,0	1/1:49,0:49:95.65:1362,96,0	1/1:0,25:25:51.17:933,51,0	1/1:2,22:24:21.07:384,21,0	1/1:7,35:41:54.32:1141,54,0	1/1:35,0:34:60.16:660,60,0	1/1:21,0:21:60.02:573,60,0	1/1:27,0:27:53.30:582,53,0	1/1:18,0:18:39.11:448,39,0
chr10	43258531	.	A	ATG	20039.29	PASS	AB=1.000;AC=37;AF=0.661;AN=56;BaseQRankSum=-6.400;DP=894;FS=3.482;HRun=0;HaplotypeScore=123.7802;InbreedingCoeff=0.7565;MQ=68.87;MQ0=11;MQRankSum=-1.442;QD=31.31;ReadPosRankSum=5.563;VQSLOD=6.8985;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:41,2:42:27.05:743,27,0	0/0:12,0:12:33.11:0,33,505	0/0:48,0:33:90.20:0,90,1240	0/0:38,0:29:87.10:0,87,1225	0/0:25,0:25:7.93:0,8,133	0/0:35,0:35:96.30:0,96,1402	0/0:33,0:33:93.27:0,93,1352	1/1:2,38:42:99:2064,108,0	0/0:28,0:28:78.23:0,78,1182	1/1:2,33:34:94.55:1743,95,0	1/1:5,13:18:29.11:440,29,0	0/1:48,0:48:9.68:682,0,10	1/1:33,0:33:41.18:613,41,0	1/1:28,0:28:35.16:543,35,0	1/1:1,30:32:63.22:1215,63,0	1/1:2,26:28:57.03:1057,57,0	0/0:35,0:35:99:0,99,1465	1/1:2,24:26:37.96:812,38,0	1/1:2,23:24:72.21:1185,72,0	1/1:1,32:34:60.21:1158,60,0	1/1:16,34:50:99:2510,144,0	1/1:25,0:25:51.11:517,51,0	0/1:27,0:27:21.07:202,0,21	0/1:42,0:41:49.96:571,0,50	1/1:1,35:35:63.13:1176,63,0	1/1:0,21:21:60.21:1077,60,0	1/1:2,25:28:53.87:976,54,0	1/1:0,19:19:39.13:753,39,0
chr10	43258532	.	T	TGTAC	8883.54	PASS	AB=0.774;AC=28;AF=0.500;AN=56;BaseQRankSum=0.660;DP=901;FS=5.785;HRun=0;HaplotypeScore=196.2438;InbreedingCoeff=0.8588;MQ=68.07;MQ0=11;MQRankSum=-1.739;QD=18.90;ReadPosRankSum=1.696;VQSLOD=4.2054;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,32:50:58:1451,58,0	0/0:11,0:11:33.11:0,33,691	0/0:47,0:33:89.72:0,90,1377	0/0:38,0:29:79.72:0,80,1401	0/1:5,0:29:12.54:13,0,108	0/0:34,0:34:99:0,99,1780	0/0:33,0:33:93.27:0,93,1714	1/1:42,0:42:46.98:1310,47,0	0/0:29,0:29:78.24:0,78,1532	1/1:35,0:34:60.24:805,60,0	0/1:19,0:19:25.35:122,0,25	0/0:45,0:46:61.45:0,61,297	0/0:33,0:33:43.77:0,44,137	0/0:29,0:29:41.48:0,41,135	1/1:33,0:33:62.63:455,63,0	1/1:27,0:27:53.69:393,54,0	0/0:35,0:35:99:0,99,1876	1/1:24,0:24:35.72:311,36,0	1/1:25,0:24:50.78:786,51,0	1/1:33,0:33:59.66:435,60,0	1/1:50,0:50:99:1130,110,0	0/0:25,0:25:31.62:0,32,91	0/0:28,0:28:15.01:0,15,96	0/0:42,0:41:55.51:0,56,268	1/1:35,0:34:60.91:438,61,0	1/1:20,0:20:56.08:524,56,0	1/1:27,0:29:56.44:427,56,0	1/1:18,0:18:38.79:286,39,0
chr10	43260472	.	TTA	T	9824.30	PASS	AB=0.876;AC=30;AF=0.536;AN=56;BaseQRankSum=2.891;DP=648;FS=5.550;HRun=0;HaplotypeScore=101.8819;InbreedingCoeff=0.7402;MQ=79.99;MQ0=20;MQRankSum=0.435;QD=23.39;ReadPosRankSum=1.264;VQSLOD=5.5485;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:30:7.09:66,0,7	0/0:7,0:7:21.07:0,21,396	0/0:72,0:22:27.59:0,28,287	0/1:70,0:33:5.79:6,0,318	1/1:28,1:29:16.17:132,16,0	0/0:19,0:19:54.10:0,54,953	0/0:20,0:20:60.03:0,60,899	1/1:0,22:24:72.02:917,72,0	0/0:13,0:13:36:0,36,622	1/1:0,23:23:69.08:902,69,0	1/1:0,30:30:81.03:1119,81,0	0/0:18,1:19:12.08:0,12,233	0/0:11,0:11:18.92:0,19,145	0/0:9,0:9:14.82:0,15,102	1/1:0,14:15:30.08:452,30,0	0/1:1,15:16:29.37:400,0,29	0/0:28,0:28:84.20:0,84,1432	1/1:0,16:16:39.13:614,39,0	1/1:1,21:22:62.56:916,63,0	1/1:0,18:19:47.88:632,48,0	1/1:2,13:15:27.08:405,27,0	0/1:15,0:15:3.55:34,0,4	0/0:21,1:22:10.13:0,10,337	0/0:8,0:8:23.73:0,24,168	1/1:0,28:30:72.24:1110,72,0	1/1:2,23:25:72.60:987,73,0	1/1:0,27:27:60.04:944,60,0	1/1:0,12:12:12.04:191,12,0
chr10	43260473	.	TAA	T	6025.61	PASS	AB=0.775;AC=32;AF=0.571;AN=56;BaseQRankSum=8.133;DP=644;FS=0.000;HRun=13;HaplotypeScore=115.5317;InbreedingCoeff=0.7806;MQ=79.51;MQ0=20;MQRankSum=-1.758;QD=16.78;ReadPosRankSum=-0.052;VQSLOD=3.7243;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,28:30:78.12:757,78,0	0/0:7,0:7:21.07:0,21,304	0/0:70,0:23:25.27:0,25,336	0/0:68,0:32:0.92:0,1,179	1/1:1,27:29:80.80:759,81,0	0/0:17,0:19:50.66:0,51,698	0/0:14,0:19:47.12:0,47,581	1/1:24,0:24:42.07:353,42,0	0/0:11,0:13:30.10:0,30,420	1/1:23,0:23:45.26:324,45,0	1/1:30,0:30:68.84:493,69,0	0/0:3,0:18:3.64:0,4,74	0/1:2,2:11:24.40:40,0,24	0/0:1,0:9:9.98:0,10,34	1/1:15,0:15:29.82:220,30,0	0/1:16,0:16:13.64:162,0,14	0/0:25,0:28:72.23:0,72,998	1/1:16,0:16:38.83:296,39,0	1/1:22,0:22:35.81:339,36,0	1/1:19,0:19:35.71:258,36,0	1/1:15,0:15:23.86:178,24,0	1/1:1,14:15:42.01:398,42,0	0/0:4,0:22:11.10:0,11,128	0/0:1,0:7:14.97:0,15,51	1/1:30,0:30:71.29:505,71,0	1/1:24,1:25:57.15:418,57,0	1/1:27,0:27:59.47:437,59,0	1/1:12,0:12:11.94:88,12,0
chr10	43261912	.	GCCC	G	7597.51	PASS	AB=0.523;AC=31;AF=0.554;AN=56;BaseQRankSum=-4.265;DP=541;FS=14.843;HRun=11;HaplotypeScore=110.6940;InbreedingCoeff=0.7661;MQ=82.94;MQ0=7;MQRankSum=-1.964;QD=24.51;ReadPosRankSum=2.023;VQSLOD=2.1319;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:27:62.80:518,63,0	0/0:8,0:9:27.09:0,27,523	0/0:55,0:31:13.90:0,14,671	0/0:46,0:21:25.42:0,25,416	0/1:2,1:13:4.09:37,0,4	0/0:3,0:15:23.92:0,24,186	0/0:8,0:24:29.74:0,30,267	1/1:9,17:26:48.07:595,48,0	0/0:2,0:17:34.12:0,34,256	1/1:9,19:28:57.14:748,57,0	1/1:0,16:16:39.13:511,39,0	0/0:3,0:15:2.08:0,2,30	0/0:0,0:10:11.21:0,11,24	0/0:2,0:9:8.72:0,9,19	1/1:1,16:17:42.13:552,42,0	1/1:3,17:20:51.13:653,51,0	0/0:18,0:18:48.14:0,48,889	1/1:2,22:24:60.19:789,60,0	1/1:2,7:9:24.08:315,24,0	1/1:1,13:14:36.11:472,36,0	1/1:3,5:8:9.03:118,9,0	0/1:1,0:23:2.22:2,0,18	0/0:2,0:12:7.43:0,7,33	0/1:1,1:16:15.54:20,0,16	1/1:3,21:24:57.17:748,57,0	1/1:1,15:16:45.11:573,45,0	1/1:1,21:22:57.18:749,57,0	1/1:1,6:7:15.03:197,15,0
chr10	43261921	.	CCCA	C	3137.74	PASS	AB=1.000;AC=22;AF=0.393;AN=56;BaseQRankSum=3.792;DP=543;FS=6.557;HRun=0;HaplotypeScore=128.1137;InbreedingCoeff=0.0761;MQ=73.20;MQ0=9;MQRankSum=-2.207;QD=10.32;ReadPosRankSum=5.904;VQSLOD=2.1918;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:0,26:26:66.16:1024,66,0	0/0:11,0:11:33.05:0,33,561	0/0:63,0:31:34.18:0,34,802	0/0:50,0:17:27.44:0,27,394	0/1:12,0:12:25.35:35,0,25	0/0:14,0:14:26.96:0,27,256	0/0:19,0:19:33.06:0,33,360	0/1:19,0:19:8.33:187,0,8	0/0:16,0:16:36.96:0,37,369	1/1:21,0:21:3.87:244,4,0	0/1:18,0:18:24.76:160,0,25	0/1:14,0:14:21.54:22,0,26	0/0:10,0:10:7.97:0,8,21	0/0:8,0:8:3.07:0,3,31	1/1:17,0:17:24.35:188,24,0	1/1:19,1:20:2.86:221,3,0	0/0:21,0:21:60.59:0,61,1004	0/1:25,0:25:5.86:205,0,6	0/1:9,0:9:0.51:102,0,1	0/1:16,0:16:26.68:144,0,27	0/1:7,0:7:30.74:34,0,31	0/1:27,0:27:29.53:30,0,117	0/0:11,0:11:3.31:0,3,54	0/0:16,0:16:4.82:0,5,44	0/1:25,0:25:9.91:214,0,10	0/1:19,0:19:52.12:179,0,52	1/1:22,0:22:33.66:265,34,0	0/1:7,0:7:7.24:59,0,7
chr10	43264678	.	TGGAAGGAA	T	1564.10	PASS	AC=14;AF=0.304;AN=46;BaseQRankSum=2.500;DP=442;FS=11.731;HRun=0;HaplotypeScore=108.7028;InbreedingCoeff=0.6324;MQ=58.53;MQ0=5;MQRankSum=-3.802;QD=15.19;ReadPosRankSum=-0.620;VQSLOD=1.8243;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:6.02:0,6,189	1/1:3,1:4:3.01:70,3,0	./.	./.	1/1:8,0:11:5.11:47,5,0	0/0:11,0:13:8.98:0,9,74	0/0:24,0:28:17.95:0,18,144	./.	0/0:20,0:24:20.99:0,21,238	0/0:13,0:12:9.03:0,9,317	0/0:5,0:5:3.01:0,3,105	1/1:20,5:25:21.06:451,21,0	1/1:7,4:12:15.05:325,15,0	1/1:14,6:20:18.06:438,18,0	0/0:17,0:17:3.01:0,3,54	0/0:17,0:17:9.03:0,9,265	0/0:28,0:28:24.08:0,24,961	0/0:27,0:27:3.01:0,3,58	0/0:19,0:18:12.04:0,12,485	0/0:3,0:3:3.01:0,3,121	0/0:21,0:21:12.04:0,12,252	1/1:12,4:16:15.05:351,15,0	1/1:13,2:15:1.73:37,2,0	./.	0/0:5,0:5:6.02:0,6,202	0/0:14,0:14:6.02:0,6,199	0/0:9,0:9:3.01:0,3,107	./.
chr10	43264757	.	C	CTGTGTG	1798.75	PASS	AB=0.972;AC=32;AF=0.667;AN=48;BaseQRankSum=-1.199;DP=588;FS=0.000;HRun=0;HaplotypeScore=191.4976;InbreedingCoeff=0.5483;MQ=50.50;MQ0=28;MQRankSum=-3.857;QD=5.15;ReadPosRankSum=-0.957;VQSLOD=1.7188;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:21:2.88:70,3,0	./.	./.	./.	0/0:9,0:10:0:0,0,0	0/1:16,1:17:80.89:87,0,81	0/0:31,0:31:10.43:0,10,170	1/1:37,0:36:9.91:133,10,0	0/0:29,0:27:26.59:0,27,430	1/1:13,0:12:3.01:61,3,0	./.	1/1:21,1:23:5.71:134,6,0	1/1:19,1:19:6.88:121,7,0	1/1:16,3:17:8.60:285,9,0	0/0:19,0:17:24.67:0,25,300	0/0:27,0:24:24.02:0,24,361	0/0:21,0:21:23.98:0,24,332	1/1:11,0:11:6.91:118,7,0	1/1:26,0:25:17.81:176,18,0	0/1:16,0:13:0:0,0,0	1/1:44,0:41:8.16:129,8,0	1/1:14,0:14:2.95:77,3,0	0/0:12,0:10:0:0,0,0	1/1:29,0:29:5.20:67,5,0	1/1:14,0:15:3.01:42,3,0	1/1:24,0:23:14.98:271,15,0	1/1:8,0:8:0.89:2,1,0	1/1:10,0:10:14.99:176,15,0
chr10	43265024	.	TCACA	T	113.68	PASS	AB=1.000;AC=7;AF=0.438;AN=16;BaseQRankSum=0.135;DP=282;FS=2.808;HRun=0;HaplotypeScore=58.1797;MQ=52.36;MQ0=7;MQRankSum=0.135;QD=2.03;ReadPosRankSum=1.977;VQSLOD=1.0482;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/0:6,0:5:2.97:0,3,20	0/1:27,0:21:0:0,0,0	./.	./.	0/0:15,0:12:3.48:0,3,36	0/0:20,0:18:7.38:0,7,103	./.	0/0:13,0:13:3.01:0,3,37	./.	./.	./.	1/1:6,0:7:3:29,3,0	./.	./.	1/1:5,0:5:3:28,3,0	1/1:9,7:15:9.03:141,9,0	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.
chr10	43265077	.	CTCTT	C	858.02	PASS	AB=0.981;AC=20;AF=0.455;AN=44;BaseQRankSum=2.206;DP=317;FS=45.969;HRun=0;HaplotypeScore=72.1138;InbreedingCoeff=0.5148;MQ=33.77;MQ0=34;MQRankSum=-4.467;QD=6.04;ReadPosRankSum=-1.885;VQSLOD=-0.1539;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:2,0:2:1.93:0,2,6	0/0:14,0:3:9.03:0,9,118	0/0:19,0:5:4.92:0,5,18	./.	0/0:11,0:10:15.15:0,15,101	0/0:32,0:27:72.58:0,73,1316	1/1:15,1:10:28.91:219,29,0	0/0:15,0:12:20.01:0,20,284	1/1:6,10:16:7.79:193,8,0	./.	0/0:12,0:11:5.78:0,6,38	1/1:13,0:13:8.41:42,8,0	0/0:8,0:8:0.47:0,0,1	0/1:7,1:8:0:0,0,0	1/1:15,0:14:8.67:47,9,0	0/0:16,0:15:32.55:0,33,499	0/1:5,0:5:8.30:15,0,8	1/1:17,1:12:8.27:167,8,0	0/1:7,0:6:0:0,0,0	0/1:6,0:5:0:0,0,0	./.	./.	0/1:9,0:9:0.15:0,0,0	./.	1/1:14,0:13:4.34:198,4,0	0/1:7,0:6:9.87:62,0,10	1/1:8,0:6:7.30:57,7,0
chr10	43265114	.	TCTCA	T	1242.43	PASS	AB=0.811;AC=18;AF=0.450;AN=40;BaseQRankSum=5.234;DP=363;FS=27.795;HRun=0;HaplotypeScore=72.2305;InbreedingCoeff=0.1141;MQ=26.33;MQ0=104;MQRankSum=-3.523;QD=6.54;ReadPosRankSum=1.594;VQSLOD=0.2544;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:7,0:6:0.26:0,0,0	./.	./.	./.	./.	0/0:17,0:13:5.81:0,6,73	0/0:22,0:18:44.93:0,45,601	0/1:19,2:11:25.58:247,0,26	0/0:10,0:5:12.04:0,12,314	0/1:15,3:18:76.33:285,0,76	./.	0/1:11,0:12:32.26:32,0,42	1/1:5,0:10:5.32:49,5,0	0/1:4,0:6:0:0,0,1	1/1:8,4:8:1.25:3,1,0	1/1:5,12:15:5.84:107,6,0	0/0:14,0:9:21.05:0,21,468	1/1:0,3:3:3.01:59,3,0	0/1:9,0:8:4.26:166,0,4	0/0:12,1:12:0.47:0,0,1	./.	./.	./.	0/1:5,0:4:0:0,0,0	0/1:19,2:15:0.10:0,0,0	0/1:11,4:15:75.99:209,0,76	0/1:5,6:10:3.99:198,0,4	0/0:6,0:4:4.17:0,4,20
chr10	43265150	.	A	ACACG	833.41	PASS	AB=0.966;AC=11;AF=0.289;AN=38;BaseQRankSum=-0.294;DP=344;FS=3.195;HRun=0;HaplotypeScore=64.0883;InbreedingCoeff=0.2313;MQ=21.88;MQ0=139;MQRankSum=0.259;QD=7.18;ReadPosRankSum=2.751;VQSLOD=1.6255;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:7:1.25:0,1,3	./.	./.	./.	./.	0/1:16,0:10:0.03:0,0,0	0/0:13,0:6:0:0,0,1	./.	0/0:11,0:4:2.99:0,3,24	0/1:19,2:11:99:216,0,109	./.	0/0:13,0:10:12.90:0,13,177	0/0:10,0:8:9.49:0,9,93	0/1:10,0:5:0:0,0,0	0/0:9,1:6:2.89:0,3,15	1/1:10,2:11:3.99:18,4,0	0/0:12,0:4:6.02:0,6,105	1/1:1,0:1:2.97:20,3,0	0/1:20,0:7:15.36:102,0,15	0/0:15,0:12:0.21:0,0,0	./.	./.	./.	0/0:8,0:2:0:0,0,0	0/0:24,2:19:1.01:0,1,2	0/1:18,0:16:28.90:334,0,29	1/1:13,1:9:18.05:251,18,0	0/0:6,0:4:7.50:0,7,86
chr10	43265152	.	A	ACG	400.26	PASS	AB=0.983;AC=10;AF=0.263;AN=38;BaseQRankSum=-0.798;DP=347;FS=3.854;HRun=0;HaplotypeScore=61.3464;InbreedingCoeff=0.1549;MQ=21.75;MQ0=139;MQRankSum=0.710;QD=3.51;ReadPosRankSum=3.779;VQSLOD=1.5971;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:7:1.25:0,1,3	./.	./.	./.	./.	0/0:16,0:10:0:0,0,0	0/1:13,0:6:0:0,0,0	./.	0/0:12,0:4:2.99:0,3,24	0/1:23,0:12:64.71:87,0,65	./.	0/0:13,0:10:12.74:0,13,121	0/0:9,0:7:9.18:0,9,43	0/1:10,0:5:0:0,0,0	0/0:9,1:6:2.87:0,3,15	0/1:15,0:11:8.95:10,0,9	0/0:11,0:3:6.02:0,6,73	1/1:1,0:1:2.97:20,3,0	0/1:18,1:7:48.36:53,0,48	0/0:17,0:13:3.37:0,3,16	./.	./.	./.	0/0:8,0:2:0:0,0,0	0/0:27,0:20:1.35:0,1,3	0/1:18,1:16:55.35:122,0,55	1/1:9,5:9:17.42:217,17,0	0/0:6,0:4:8.46:0,8,55
chr10	43265186	.	ACACACACACTCTCT	A	176.12	PASS	AB=1.000;AC=11;AF=0.423;AN=26;BaseQRankSum=1.148;DP=271;FS=0.000;HRun=0;HaplotypeScore=42.7247;InbreedingCoeff=0.3553;MQ=19.24;MQ0=133;MQRankSum=-0.028;QD=1.96;ReadPosRankSum=-0.364;VQSLOD=1.2672;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:12,0:8:0:0,0,0	./.	./.	./.	./.	./.	0/0:24,0:10:8.54:0,9,358	0/1:19,0:2:0:0,0,0	./.	0/0:11,0:3:6.02:0,6,126	./.	1/1:8,2:6:3.01:121,3,0	1/1:4,1:5:3.01:116,3,0	./.	./.	./.	0/1:12,0:2:24.17:24,0,49	./.	0/0:19,0:7:11.80:0,12,107	1/1:13,0:8:1.83:3,2,0	./.	./.	./.	./.	1/1:19,0:14:0.32:1,0,0	0/0:11,0:10:23.90:0,24,288	0/0:8,0:4:2.99:0,3,24	0/0:4,0:3:6.02:0,6,168
chr10	43265569	.	ACTCT	A	30.04	PASS	AB=1.000;AC=5;AF=0.167;AN=30;BaseQRankSum=-0.271;DP=241;FS=0.000;HRun=0;HaplotypeScore=34.6754;InbreedingCoeff=0.1233;MQ=19.42;MQ0=109;MQRankSum=-1.433;QD=1.07;ReadPosRankSum=0.271;VQSLOD=1.1783;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	./.	./.	./.	./.	0/0:5,0:5:3.01:0,3,51	0/0:8,0:6:14.60:0,15,156	0/1:10,0:8:0.18:0,0,0	1/1:7,1:3:3.01:51,3,0	0/1:7,0:3:12.97:32,0,13	./.	./.	0/0:4,0:3:3.01:0,3,70	0/1:3,0:2:33.35:33,0,70	0/0:6,0:4:3.01:0,3,52	0/0:8,0:1:3.01:0,3,44	0/0:14,0:8:0.83:0,1,3	0/0:12,0:3:0:0,0,0	./.	./.	./.	0/0:13,0:9:0.47:0,0,1	0/0:8,0:2:4.26:0,4,41	0/0:5,0:1:3.01:0,3,59	0/0:5,0:5:10.23:0,10,122
chr10	43265579	.	TCTCTCA	T	120.38	PASS	AB=0.976;AC=8;AF=0.250;AN=32;BaseQRankSum=0.635;DP=261;FS=0.000;HRun=0;HaplotypeScore=35.1390;InbreedingCoeff=-0.0454;MQ=19.46;MQ0=120;MQRankSum=-1.664;QD=2.19;ReadPosRankSum=1.180;VQSLOD=1.2015;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	0/1:7,0:3:0:0,0,0	./.	./.	./.	./.	./.	./.	0/0:6,0:5:2.98:0,3,69	0/1:9,0:6:32.73:33,0,160	0/1:10,0:8:0.30:0,0,0	1/1:8,1:3:3.01:69,3,0	0/1:5,1:3:18.19:52,0,18	./.	./.	0/0:4,0:3:3.01:0,3,92	0/1:5,0:2:32.17:32,0,99	0/0:6,0:4:3.01:0,3,71	0/0:6,0:1:3.01:0,3,44	0/0:15,0:9:2.87:0,3,19	0/0:17,0:4:0:0,0,0	./.	./.	./.	0/0:14,0:10:0:0,0,0	0/1:9,0:2:25.95:26,0,30	0/0:6,0:1:3.01:0,3,88	0/0:5,0:5:10.23:0,10,135
chr10	43265583	.	TCACACA	T	214.09	PASS	AB=0.886;AC=11;AF=0.367;AN=30;BaseQRankSum=1.796;DP=255;FS=0.000;HRun=0;HaplotypeScore=33.8037;InbreedingCoeff=-0.0042;MQ=19.48;MQ0=116;MQRankSum=-1.162;QD=2.41;ReadPosRankSum=0.528;VQSLOD=1.0383;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/1:7,0:3:0:0,0,0	./.	./.	./.	./.	./.	./.	0/0:6,0:5:2.93:0,3,39	0/1:6,2:5:92.11:117,0,92	0/1:8,1:8:0:1,0,0	1/1:9,0:3:3.01:34,3,0	0/1:6,0:3:18.47:24,0,18	./.	./.	0/0:4,0:3:3.01:0,3,75	0/0:5,0:2:2.50:0,3,100	0/0:5,0:4:3.48:0,3,51	./.	0/1:10,0:8:11.31:11,0,25	0/1:19,0:5:0:0,0,0	./.	./.	./.	0/0:13,0:10:0:0,0,0	1/1:9,1:3:7.55:92,8,0	0/0:6,0:1:3.01:0,3,101	0/1:2,0:4:30.28:30,0,33
chr10	43265613	.	TCACACACACACACACACA	T	609.13	PASS	AB=0.917;AC=22;AF=0.688;AN=32;BaseQRankSum=2.894;DP=269;FS=0.000;HRun=0;HaplotypeScore=39.9118;InbreedingCoeff=0.3360;MQ=20.07;MQ0=127;MQRankSum=-3.159;QD=4.51;ReadPosRankSum=1.195;VQSLOD=1.2600;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:8:0.47:1,0,0	0/0:6,0:5:6.02:0,6,310	./.	./.	./.	1/1:12,0:5:0.30:1,0,0	1/1:22,0:7:1.36:3,1,0	./.	./.	1/1:6,0:6:14.93:385,15,0	1/1:5,0:4:0.89:2,1,0	0/0:9,0:3:0.47:0,0,1	1/1:6,0:2:4.26:55,4,0	./.	./.	./.	0/0:9,0:6:12.02:0,12,500	1/1:9,0:5:2.84:21,3,0	./.	1/1:11,2:8:3.48:53,3,0	0/1:29,0:7:0:0,0,0	./.	./.	./.	0/0:7,2:8:1.25:0,1,3	0/1:8,1:4:31.21:168,0,31	1/1:4,0:1:1.25:3,1,0	1/1:2,0:2:2.80:13,3,0
chr10	43265671	.	T	TCACA	617.42	PASS	AB=1.000;AC=25;AF=0.543;AN=46;BaseQRankSum=3.156;DP=339;FS=11.199;HRun=0;HaplotypeScore=66.4175;InbreedingCoeff=0.4333;MQ=25.25;MQ0=106;MQRankSum=-4.277;QD=3.65;ReadPosRankSum=-2.188;VQSLOD=-0.6136;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:11:2.81:0,3,45	./.	./.	./.	0/1:14,0:10:0:0,0,0	0/0:13,0:9:6.01:0,6,56	0/0:42,0:22:17.97:0,18,193	./.	0/0:14,0:8:12.04:0,12,166	1/1:15,0:10:8.94:76,9,0	0/1:16,0:11:0.01:0,0,0	1/1:9,0:4:2.97:20,3,0	1/1:5,0:3:8.98:91,9,0	./.	1/1:9,0:4:3.01:50,3,0	1/1:4,4:6:3.01:70,3,0	0/0:24,0:17:27.29:0,27,304	1/1:11,0:8:3.90:45,4,0	1/1:4,0:1:3.01:40,3,0	0/0:9,0:9:0:0,0,0	0/0:26,0:7:0:0,0,0	0/1:14,0:9:0:0,0,0	0/1:7,0:6:0:0,0,0	0/1:13,0:8:0:0,0,0	0/1:13,0:12:0:0,0,0	1/1:15,0:10:15.01:175,15,0	1/1:7,0:5:5.98:87,6,0	0/1:9,0:8:49.81:88,0,50
chr10	43267322	.	T	TAA	4905.34	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-4.051;DP=577;FS=5.429;HRun=11;HaplotypeScore=80.9933;InbreedingCoeff=0.9729;MQ=73.29;MQ0=1;MQRankSum=-0.712;QD=28.69;ReadPosRankSum=-0.385;VQSLOD=5.0525;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,22:27:39.13:565,39,0	0/0:4,0:4:12.02:0,12,116	0/0:21,0:19:8.82:0,9,104	0/0:15,0:12:8.87:0,9,87	1/1:7,17:25:60.62:827,61,0	0/0:14,0:14:39.06:0,39,378	0/0:28,0:28:72.04:0,72,685	0/0:32,0:32:62.93:0,63,602	0/0:20,0:20:54.07:0,54,524	0/0:23,0:24:53.78:0,54,506	0/0:12,0:13:20.96:0,21,253	1/1:11,19:29:75.20:1031,75,0	1/1:3,13:18:42.14:591,42,0	1/1:9,8:18:41.45:477,41,0	0/0:11,0:11:30.02:0,30,291	0/0:13,0:14:32.74:0,33,303	0/0:40,2:42:49.51:0,50,816	0/0:27,0:28:50.93:0,51,486	0/0:16,0:16:32.98:0,33,313	0/0:21,0:21:51.04:0,51,494	0/0:21,0:20:36.02:0,36,342	1/1:4,15:20:48.11:650,48,0	1/1:7,7:16:38.60:486,39,0	1/1:6,9:17:23.05:278,23,0	0/0:19,0:20:44.77:0,45,419	0/0:26,0:26:66.09:0,66,640	0/0:27,0:28:62.69:0,63,577	0/0:7,0:7:21.03:0,21,204
chr10	43267423	.	G	GCTTCT	33669.77	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=2.191;DP=680;FS=14.082;HRun=0;HaplotypeScore=145.7362;InbreedingCoeff=0.9993;MQ=78.52;MQ0=0;MQRankSum=-14.678;QD=66.41;ReadPosRankSum=0.687;VQSLOD=5.4002;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:12,25:38:87.30:2434,87,0	0/0:15,0:15:42.14:0,42,860	0/0:25,0:25:56.76:0,57,1058	0/0:27,0:27:56.63:0,57,1096	1/1:7,20:27:60.19:1751,60,0	0/0:23,0:23:66.23:0,66,1337	0/0:32,0:32:87.30:0,87,1784	1/1:21,18:41:81.27:2345,81,0	0/0:17,0:17:48.16:0,48,967	1/1:6,15:21:45.15:1371,45,0	1/1:3,11:15:36.12:1040,36,0	1/1:5,23:30:78.27:2340,78,0	1/1:8,14:21:54.18:1490,54,0	1/1:9,18:27:72.25:1949,72,0	1/1:1,17:18:51.18:1553,51,0	1/1:4,19:24:57.20:1735,57,0	0/0:34,0:34:96.30:0,96,1875	1/1:3,18:21:54.19:1645,54,0	1/1:8,12:20:48.15:1350,48,0	1/1:3,18:22:63.22:1908,63,0	1/1:6,9:16:24.08:677,24,0	1/1:9,12:22:39.13:1133,39,0	1/1:4,14:19:42.14:1180,42,0	1/1:9,13:23:33.09:1003,33,0	1/1:7,14:22:45.15:1335,45,0	1/1:7,23:31:81.24:2160,81,0	1/1:9,27:36:84.29:2450,84,0	1/1:0,10:11:27.09:822,27,0
chr10	43267935	.	CT	C	5331.07	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=11.074;DP=651;FS=2.569;HRun=2;HaplotypeScore=66.7074;InbreedingCoeff=0.9979;MQ=84.97;MQ0=0;MQRankSum=-1.475;QD=35.78;ReadPosRankSum=5.527;VQSLOD=5.1617;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:81.24:0,81,1170	0/0:7,0:7:21.06:0,21,297	0/0:21,0:21:60.15:0,60,819	0/0:21,0:21:54.63:0,55,778	0/0:19,0:19:57.15:0,57,812	0/0:14,0:14:39.12:0,39,566	0/0:30,0:30:90.27:0,90,1290	0/0:28,0:28:78.26:0,78,1153	0/0:18,0:18:54.17:0,54,783	0/0:27,0:27:81.26:0,81,1176	0/0:14,0:14:36.11:0,36,504	1/1:0,38:38:99:1363,105,0	1/1:0,26:26:69.22:895,69,0	1/1:0,25:25:66.21:857,66,0	0/0:37,0:37:99:0,111,1639	0/0:19,0:19:57.19:0,57,848	0/0:33,0:33:96.32:0,96,1433	0/0:25,0:25:75.19:0,75,1077	0/0:23,0:23:69.23:0,69,1028	0/0:25,0:25:66.15:0,66,896	0/0:44,0:44:99:0,126,1808	1/1:0,9:9:24.08:312,24,0	1/1:1,17:18:51.16:659,51,0	1/1:0,33:33:96.31:1246,96,0	0/0:15,0:15:42.01:0,42,619	0/0:27,0:27:81.24:0,81,1151	0/0:17,0:17:48.16:0,48,719	0/0:10,0:10:21.05:0,21,294
chr10	43268499	.	AG	A	5615.87	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=13.305;DP=704;FS=1.884;HRun=4;HaplotypeScore=149.1819;InbreedingCoeff=0.9998;MQ=80.39;MQ0=0;MQRankSum=-5.470;QD=32.65;ReadPosRankSum=1.461;VQSLOD=3.0286;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,126,1747	0/0:12,0:12:36.12:0,36,503	0/0:20,0:20:57.19:0,57,786	0/0:28,0:28:40.98:0,41,741	1/1:4,29:33:84.24:994,84,0	0/0:17,0:17:51.17:0,51,713	0/0:22,0:22:63.20:0,63,865	0/0:30,0:30:87.28:0,87,1204	0/0:29,0:29:81.25:0,81,1115	0/0:34,0:34:96.32:0,96,1339	0/0:21,0:21:57.19:0,57,793	1/1:6,24:30:84.26:1006,84,0	1/1:1,33:34:99:1222,102,0	1/1:2,22:24:66.20:791,66,0	0/0:30,0:30:87.26:0,87,1168	0/0:21,0:21:60.20:0,60,840	0/0:25,0:25:75.25:0,75,1050	0/0:18,0:18:42.14:0,42,587	0/0:22,0:22:54.17:0,54,739	0/0:19,0:19:54.18:0,54,755	0/0:44,0:44:99:0,120,1645	1/1:0,11:11:30.09:360,30,0	1/1:1,15:16:45.14:540,45,0	1/1:3,21:24:59.92:703,60,0	0/0:22,0:22:60.16:0,60,816	0/0:29,0:29:84.26:0,84,1158	0/0:29,0:29:84.28:0,84,1174	0/0:13,0:13:30.07:0,30,383
chr10	43268557	.	T	TTG	26475.72	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=-9.199;DP=715;FS=0.351;HRun=0;HaplotypeScore=96.5240;InbreedingCoeff=0.9987;MQ=81.57;MQ0=1;MQRankSum=-6.499;QD=46.61;ReadPosRankSum=0.642;VQSLOD=5.4992;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,46:48:99:2346,129,0	0/0:9,0:9:27.09:0,27,386	0/0:17,0:17:47.91:0,48,582	0/0:25,0:25:60.16:0,60,774	1/1:3,23:27:60.19:1007,60,0	0/0:18,0:18:51.17:0,51,731	0/0:26,0:26:78.24:0,78,1097	1/1:1,32:33:96.33:1733,96,0	0/0:25,0:25:63.21:0,63,902	1/1:0,28:29:84.24:1493,84,0	1/1:3,23:26:57.19:1026,57,0	1/1:2,32:35:96.11:1723,96,0	1/1:3,21:25:63.22:1139,63,0	1/1:0,15:16:42.14:751,42,0	1/1:1,26:27:78.27:1430,78,0	1/1:3,20:24:51.17:935,51,0	0/0:27,0:27:72.23:0,72,1012	1/1:0,32:31:87.30:1595,87,0	1/1:2,17:19:51.15:828,51,0	1/1:0,21:21:60.21:1097,60,0	1/1:1,52:53:99:2639,144,0	1/1:1,11:12:24.08:439,24,0	1/1:3,17:20:45.15:822,45,0	1/1:3,33:36:87.30:1591,87,0	1/1:1,19:20:54.19:987,54,0	1/1:4,25:29:75.26:1364,75,0	1/1:3,22:24:66.22:1147,66,0	1/1:1,10:11:21.07:385,21,0
chr10	43268822	.	A	AC	883.69	PASS	AB=0.929;AC=13;AF=0.232;AN=56;BaseQRankSum=5.713;DP=619;FS=0.444;HRun=0;HaplotypeScore=169.4837;InbreedingCoeff=0.7108;MQ=52.59;MQ0=31;MQRankSum=-3.892;QD=4.75;ReadPosRankSum=3.153;VQSLOD=2.9238;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:47.19:0,47,371	0/0:11,0:11:31.49:0,31,228	0/1:37,0:12:5.10:5,0,79	0/0:26,0:8:4.88:0,5,34	1/1:19,11:30:42.95:232,43,0	0/0:20,0:19:43.94:0,44,369	0/0:18,0:18:40.88:0,41,340	0/0:24,0:21:38.52:0,39,314	0/0:13,0:13:34.96:0,35,278	0/0:22,0:21:56.12:0,56,437	0/0:15,0:14:38.93:0,39,347	0/1:17,2:19:33.24:53,0,33	1/1:15,5:14:22.80:151,23,0	0/1:13,2:13:6.23:37,0,6	0/0:22,0:22:56.37:0,56,402	0/0:14,0:14:32.19:0,32,224	0/0:30,0:29:72.90:0,73,539	0/0:23,0:19:41.35:0,41,337	0/0:35,0:31:81.93:0,82,646	0/0:22,0:21:49.65:0,50,377	0/0:17,0:14:19.67:0,20,157	1/1:14,6:19:38.35:209,38,0	1/1:22,3:26:31.14:268,31,0	1/1:15,4:19:11.10:109,11,0	0/0:23,0:22:30.74:0,31,212	0/0:34,0:29:71.13:0,71,513	0/0:20,0:20:57.80:0,58,516	0/0:15,0:14:36.03:0,36,345
chr10	43268825	.	A	AC	404.31	PASS	AB=0.828;AC=10;AF=0.179;AN=56;BaseQRankSum=8.781;DP=614;FS=2.141;HRun=0;HaplotypeScore=164.2263;InbreedingCoeff=0.3931;MQ=50.91;MQ0=34;MQRankSum=-6.144;QD=2.81;ReadPosRankSum=-2.216;VQSLOD=2.7715;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:35.26:0,35,317	0/0:10,0:10:29:0,29,219	0/0:37,0:11:4.30:0,4,67	0/0:27,0:8:13.87:0,14,103	0/1:18,11:29:43.78:116,0,44	0/0:21,0:20:46.92:0,47,389	0/0:17,0:17:37.99:0,38,324	0/0:22,0:18:2.48:0,2,192	0/0:13,0:13:38.10:0,38,305	0/0:22,0:21:57.10:0,57,422	0/0:15,0:14:41.85:0,42,351	0/1:16,2:18:14.18:64,0,14	0/1:16,5:15:6.59:58,0,7	1/1:14,2:14:4.21:61,4,0	0/0:22,0:22:19.19:0,19,339	0/0:15,0:15:25.09:0,25,227	0/0:28,0:27:66.80:0,67,493	0/0:23,0:19:44.55:0,45,333	0/0:37,0:32:78.80:0,79,606	0/0:24,0:23:48.27:0,48,326	0/0:18,0:15:22.42:0,22,171	1/1:14,6:19:4.24:112,4,0	0/1:19,3:22:20.17:81,0,20	1/1:14,4:18:10.64:57,11,0	0/0:22,0:21:27.07:0,27,187	0/0:35,0:30:67.57:0,68,511	0/0:20,0:20:52.17:0,52,453	0/0:12,0:11:26.98:0,27,251
chr10	43268829	.	A	AC	1404.64	PASS	AB=0.932;AC=23;AF=0.411;AN=56;BaseQRankSum=7.648;DP=621;FS=7.638;HRun=0;HaplotypeScore=163.7147;InbreedingCoeff=0.3632;MQ=48.24;MQ0=36;MQRankSum=-7.736;QD=4.12;ReadPosRankSum=3.279;VQSLOD=2.6369;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:27:40.34:0,40,315	0/0:10,0:10:28.98:0,29,216	0/0:37,0:10:19.80:0,20,109	0/0:27,0:9:15.87:0,16,120	1/1:28,0:28:33.68:252,34,0	0/0:20,0:19:43.93:0,44,363	0/0:17,0:17:37.64:0,38,313	0/1:21,0:17:6.78:7,0,72	0/0:13,0:13:38.06:0,38,295	0/1:22,1:22:76.22:81,0,76	0/1:14,1:14:12.58:13,0,61	1/1:19,0:19:25.78:145,26,0	1/1:21,0:15:21.83:126,22,0	1/1:17,0:15:25.38:123,25,0	0/1:15,4:20:43.36:206,0,43	0/1:13,2:15:32.89:33,0,86	0/0:30,0:29:75.25:0,75,554	0/1:20,3:19:62.86:63,0,97	0/0:38,0:31:10.40:0,10,277	0/0:24,0:23:35.37:0,35,218	0/1:18,1:16:1.84:2,0,76	1/1:20,0:19:28.08:196,28,0	1/1:20,0:20:18.82:127,19,0	1/1:20,0:20:8.21:98,8,0	0/1:25,0:24:9.33:46,0,9	0/1:34,1:30:83.82:84,0,146	0/0:22,0:22:44.80:0,45,285	0/0:14,0:11:19.15:0,19,93
chr10	43268839	.	AAC	A	7606.39	PASS	AB=0.951;AC=33;AF=0.589;AN=56;BaseQRankSum=-4.859;DP=596;FS=4.992;HRun=0;HaplotypeScore=153.5344;InbreedingCoeff=0.5435;MQ=45.90;MQ0=28;MQRankSum=0.857;QD=17.09;ReadPosRankSum=-4.656;VQSLOD=3.8206;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:17,8:24:39.05:370,39,0	0/0:12,0:12:33.57:0,34,538	0/1:21,0:8:15.50:50,0,15	0/1:20,1:9:15.87:16,0,31	0/1:31,0:31:0.84:1,0,392	0/0:18,0:17:29.19:0,29,519	0/0:16,0:16:26.37:0,26,420	1/1:13,7:16:33.50:301,34,0	0/0:12,0:12:22.65:0,23,261	1/1:9,14:22:55.57:725,56,0	1/1:13,6:18:41.07:467,41,0	0/0:20,0:20:25.12:0,25,323	0/1:18,0:14:24.50:25,0,112	0/1:19,0:18:21.37:21,0,180	1/1:17,1:18:45.89:293,46,0	1/1:16,0:16:40.58:267,41,0	0/0:33,0:32:26.85:0,27,926	1/1:14,8:19:43.75:516,44,0	1/1:12,25:30:83.80:1078,84,0	1/1:3,19:21:53.21:746,53,0	1/1:6,11:14:21.07:314,21,0	0/1:21,0:20:5:5,0,233	0/0:21,0:21:17.94:0,18,315	0/0:19,0:19:19.66:0,20,282	1/1:3,22:24:32.98:450,33,0	1/1:9,24:28:71.95:876,72,0	1/1:15,7:22:63.91:836,64,0	0/1:8,6:10:11.95:249,0,12
chr10	43268840	.	AC	A	4295.51	PASS	AB=0.972;AC=37;AF=0.661;AN=56;BaseQRankSum=-0.358;DP=581;FS=12.221;HRun=1;HaplotypeScore=154.5480;InbreedingCoeff=0.0692;MQ=45.03;MQ0=28;MQRankSum=1.730;QD=8.21;ReadPosRankSum=-5.176;VQSLOD=-0.1156;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:25:6.35:157,6,0	0/0:12,0:12:31.13:0,31,414	0/1:17,3:8:18.73:33,0,19	0/1:18,3:9:31.64:32,0,39	0/1:28,0:28:19.83:20,0,294	0/0:18,0:17:14.73:0,15,404	0/0:16,0:16:10.28:0,10,286	1/1:19,0:15:5.55:72,6,0	0/0:12,0:12:3.91:0,4,177	1/1:20,0:19:49.18:344,49,0	1/1:16,0:15:37.56:344,38,0	0/1:19,1:20:13.53:14,0,273	0/1:18,0:14:38.31:38,0,84	0/1:19,0:18:46.81:47,0,129	1/1:18,0:18:48.37:311,48,0	1/1:16,0:16:41.04:284,41,0	0/1:32,0:31:16.79:17,0,717	1/1:21,1:19:49.70:384,50,0	1/1:36,1:30:65.47:398,65,0	1/1:22,0:21:48.09:269,48,0	1/1:17,0:14:19.98:108,20,0	0/1:21,0:20:41.44:41,0,188	0/1:20,0:20:36.24:36,0,262	0/1:18,0:18:16.93:17,0,214	1/1:25,0:24:32.18:278,32,0	1/1:30,2:27:71.31:552,71,0	1/1:22,0:22:42.86:438,43,0	0/1:14,0:10:21.97:60,0,22
chr10	43268842	.	AAAC	A	3023.79	PASS	AB=1.000;AC=28;AF=0.500;AN=56;BaseQRankSum=-2.003;DP=597;FS=5.834;HRun=0;HaplotypeScore=177.2898;InbreedingCoeff=0.0966;MQ=45.02;MQ0=29;MQRankSum=-0.966;QD=6.92;ReadPosRankSum=-3.756;VQSLOD=1.9420;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:26:33.30:44,0,33	0/0:12,0:12:32.09:0,32,458	0/1:20,0:9:12.09:12,0,22	0/1:21,0:9:14.37:19,0,14	0/0:28,0:28:6.07:0,6,256	0/0:18,0:17:7.22:0,7,383	0/0:16,0:16:3.81:0,4,309	0/0:19,0:15:12.17:0,12,77	0/0:12,0:12:9.18:0,9,135	1/1:25,0:24:30.59:350,31,0	1/1:15,0:14:17.20:234,17,0	0/1:23,0:23:55.73:75,0,56	0/1:17,0:13:57.73:58,0,85	0/1:20,0:19:8.25:8,0,101	1/1:16,2:18:47.59:424,48,0	1/1:16,1:17:43.92:359,44,0	0/0:34,0:33:24.55:0,25,646	1/1:21,2:20:4.93:224,5,0	0/1:38,0:31:68.29:162,0,68	0/1:21,0:20:34.38:69,0,34	0/1:18,0:15:28.70:29,0,46	0/0:21,0:20:6.58:0,7,140	0/1:20,0:20:5.58:6,0,117	0/1:19,0:19:7.10:7,0,75	1/1:25,0:24:32.28:271,32,0	1/1:32,0:27:55.06:490,55,0	1/1:23,0:23:22.79:314,23,0	0/1:14,0:10:53.69:54,0,54
chr10	43268844	.	AC	A	4031.54	PASS	AB=0.970;AC=38;AF=0.679;AN=56;BaseQRankSum=5.385;DP=595;FS=23.122;HRun=1;HaplotypeScore=153.7114;InbreedingCoeff=-0.1709;MQ=43.05;MQ0=28;MQRankSum=-3.089;QD=7.15;ReadPosRankSum=-0.177;VQSLOD=-0.7104;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:27:23.69:172,24,0	0/0:12,0:12:28.95:0,29,272	0/1:15,4:8:32.75:33,0,50	0/1:16,6:8:17.09:90,0,17	0/1:27,0:27:78.40:125,0,78	0/0:19,0:18:3.53:0,4,298	0/1:16,0:16:7.28:7,0,164	0/1:17,0:13:41.51:42,0,68	0/1:12,0:12:12.87:13,0,82	1/1:25,0:24:25.98:276,26,0	1/1:14,1:15:16.34:273,16,0	0/1:22,0:22:19.25:104,0,19	1/1:17,0:13:16.74:108,17,0	1/1:20,0:19:17.39:124,17,0	1/1:18,1:19:54.89:395,55,0	1/1:17,0:17:43.60:320,44,0	0/1:34,0:33:23.87:24,0,378	1/1:23,0:20:18.01:326,18,0	0/1:35,1:29:99:150,0,104	0/1:22,0:21:34.61:50,0,35	0/1:19,0:16:19.44:19,0,53	1/1:21,0:20:5.74:141,6,0	0/1:19,0:19:21.35:87,0,21	0/1:17,0:18:24.99:82,0,25	1/1:27,0:26:31.47:256,31,0	1/1:30,1:26:56.41:469,56,0	1/1:24,0:24:12.52:287,13,0	0/1:14,0:10:45.25:57,0,45
chr10	43268845	.	C	CA	1884.11	PASS	AB=0.979;AC=32;AF=0.571;AN=56;BaseQRankSum=4.549;DP=612;FS=9.840;HRun=13;HaplotypeScore=170.0684;InbreedingCoeff=0.2880;MQ=47.82;MQ0=28;MQRankSum=-2.637;QD=4.07;ReadPosRankSum=0.723;VQSLOD=0.5067;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:27:5.77:0,6,53	0/0:12,1:13:0.73:0,1,142	0/1:19,0:10:7.76:8,0,46	0/1:26,0:11:4.04:4,0,13	0/1:27,0:27:32.96:106,0,33	0/0:17,2:18:4.87:0,5,165	0/1:15,1:16:25.62:26,0,87	0/1:19,0:15:4.91:5,0,90	0/1:12,0:12:4.10:4,0,24	1/1:15,12:26:4.61:267,5,0	1/1:12,3:15:6.98:140,7,0	1/1:19,1:22:13.86:186,14,0	0/1:16,1:14:0.83:60,0,1	0/1:19,0:19:7.33:45,0,7	1/1:19,0:19:27.51:170,28,0	1/1:18,0:18:22.83:143,23,0	0/0:34,0:33:35.25:0,35,261	1/1:19,4:20:11.79:167,12,0	0/1:36,1:30:1.36:1,0,209	0/0:22,0:21:27.82:0,28,202	0/0:19,0:16:18.01:0,18,101	1/1:24,0:23:19.22:103,19,0	1/1:19,0:19:5.44:78,5,0	1/1:19,0:19:18.39:108,18,0	1/1:19,8:26:23.67:186,24,0	1/1:24,7:26:11.84:235,12,0	0/1:22,2:24:19.96:20,0,99	0/0:14,0:10:11.87:0,12,82
chr10	43268848	.	A	AC	836.13	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=5.171;DP=617;FS=0.407;HRun=0;HaplotypeScore=175.9182;InbreedingCoeff=0.8301;MQ=49.68;MQ0=24;MQRankSum=-6.105;QD=5.57;ReadPosRankSum=1.222;VQSLOD=3.0329;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:20.76:0,21,228	0/0:13,0:13:35.62:0,36,433	0/0:23,0:12:19.62:0,20,187	0/0:25,0:11:21.18:0,21,135	0/0:27,0:27:5.53:0,6,92	0/0:19,0:18:38.66:0,39,478	0/0:15,0:15:34.57:0,35,361	0/0:20,0:17:34.28:0,34,364	0/0:12,0:12:32.17:0,32,258	0/0:27,0:27:17.51:0,18,321	0/0:15,0:15:23.96:0,24,175	1/1:20,3:23:31.17:315,31,0	1/1:17,0:14:9.31:97,9,0	1/1:20,1:20:5.40:102,5,0	0/0:19,0:19:36.97:0,37,263	0/0:18,0:18:13:0,13,164	0/0:36,0:35:95.50:0,95,941	0/0:25,0:22:25.30:0,25,185	0/0:35,0:29:80.06:0,80,757	0/0:25,0:24:51.59:0,52,549	0/0:16,0:15:26.94:0,27,273	1/1:22,0:21:36.03:195,36,0	1/1:16,3:19:3.59:141,4,0	1/1:17,2:19:14.96:155,15,0	0/1:29,0:28:2.43:2,0,63	0/0:29,0:26:33.21:0,33,285	0/0:24,0:24:56.96:0,57,561	0/0:14,0:10:21.45:0,21,230
chr10	43268850	.	A	AC	39.45	PASS	AB=0.730;AC=1;AF=0.018;AN=56;BaseQRankSum=3.138;DP=610;FS=13.214;HRun=0;HaplotypeScore=177.5465;InbreedingCoeff=-0.0384;MQ=51.28;MQ0=19;MQRankSum=-5.383;QD=1.46;ReadPosRankSum=0.224;VQSLOD=1.7724;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:40.28:0,40,346	0/0:14,0:14:35.63:0,36,437	0/0:24,0:13:20.10:0,20,202	0/0:25,0:12:12.94:0,13,127	0/1:17,10:27:99:114,0,105	0/0:18,0:18:41.66:0,42,508	0/0:15,0:15:34.57:0,35,367	0/0:20,0:17:23.16:0,23,359	0/0:11,0:11:32.21:0,32,260	0/0:27,0:27:18.83:0,19,325	0/0:16,0:16:18.52:0,19,165	0/0:23,0:23:24.09:0,24,224	0/0:16,0:14:21.95:0,22,154	0/0:21,0:20:25:0,25,191	0/0:19,0:19:39.37:0,39,292	0/0:17,0:17:30.39:0,30,196	0/0:36,0:35:92.47:0,92,928	0/0:23,0:21:4.85:0,5,194	0/0:33,0:30:83.48:0,83,787	0/0:25,0:24:46.13:0,46,547	0/0:16,0:15:26.32:0,26,234	0/0:23,0:22:32.16:0,32,232	0/0:18,1:19:27.45:0,27,206	0/0:19,0:19:25.77:0,26,151	0/0:28,0:27:3.46:0,3,117	0/0:28,0:26:2.39:0,2,250	0/0:25,0:25:53.37:0,53,601	0/0:13,0:9:14.75:0,15,150
chr10	43268851	.	A	AC	89.84	PASS	AB=0.848;AC=6;AF=0.107;AN=56;BaseQRankSum=7.173;DP=614;FS=0.000;HRun=0;HaplotypeScore=177.8141;InbreedingCoeff=-0.1225;MQ=52.53;MQ0=18;MQRankSum=-5.330;QD=0.73;ReadPosRankSum=5.428;VQSLOD=2.0712;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:56.32:0,56,480	0/0:13,0:13:35.65:0,36,442	0/0:24,0:13:26.31:0,26,222	0/0:25,0:12:15.63:0,16,148	0/0:26,1:27:41.62:0,42,334	0/0:19,0:19:41.67:0,42,510	0/0:16,0:16:34.57:0,35,367	0/0:20,0:17:36.57:0,37,405	0/0:11,0:11:32.20:0,32,259	0/0:28,0:28:19.27:0,19,343	0/0:17,0:17:26.37:0,26,202	0/1:19,4:23:32.63:33,0,131	0/1:15,2:15:27.05:27,0,59	0/1:19,3:21:29.32:29,0,78	0/0:19,0:19:34.13:0,34,255	0/0:15,0:15:29.71:0,30,188	0/0:36,0:35:95.23:0,95,955	0/0:23,0:21:32.75:0,33,254	0/0:33,0:30:83.33:0,83,839	0/0:26,0:25:61.72:0,62,629	0/0:16,0:15:26.99:0,27,279	0/1:16,7:23:74.16:74,0,115	0/1:17,2:19:7.70:8,0,106	0/1:14,5:19:40.73:41,0,42	0/0:28,0:27:6.57:0,7,113	0/0:28,0:26:32.41:0,32,294	0/0:25,0:25:67.86:0,68,620	0/0:13,0:9:14.83:0,15,153
chr10	43268858	.	A	AAAC	3673.88	PASS	AB=0.841;AC=13;AF=0.232;AN=56;BaseQRankSum=6.221;DP=584;FS=0.376;HRun=0;HaplotypeScore=172.2902;InbreedingCoeff=0.6904;MQ=56.66;MQ0=11;MQRankSum=-6.759;QD=22.54;ReadPosRankSum=4.405;VQSLOD=3.1219;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:40.88:0,41,292	0/0:14,0:14:41.59:0,42,471	0/0:22,0:14:19.48:0,19,229	0/1:22,0:14:14.71:15,0,66	0/1:12,10:23:70.71:640,0,71	0/0:18,0:18:44.60:0,45,534	0/0:16,0:16:40.26:0,40,388	0/0:23,0:21:49.81:0,50,487	0/0:14,0:14:37.65:0,38,288	0/0:29,0:29:49.43:0,49,400	0/0:18,0:18:24.74:0,25,253	0/1:18,4:22:21.08:377,0,21	1/1:13,2:16:29.79:477,30,0	1/1:16,3:19:37.94:557,38,0	0/0:17,0:18:16.38:0,16,187	0/0:14,0:14:33.83:0,34,211	0/0:32,0:32:86.78:0,87,911	0/0:21,0:20:35.93:0,36,242	0/0:33,0:31:65.68:0,66,768	0/0:25,0:24:58.33:0,58,539	0/0:16,0:16:29.10:0,29,277	1/1:14,7:22:34.73:707,35,0	1/1:14,2:19:26.13:493,26,0	1/1:13,5:19:14.67:407,15,0	0/0:25,0:24:26.70:0,27,162	0/0:24,0:22:34.53:0,35,272	0/0:24,0:24:46.10:0,46,519	0/0:8,0:5:12.04:0,12,170
chr10	43271131	.	TTTGTTG	T	10214.94	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-4.035;DP=723;FS=0.353;HRun=0;HaplotypeScore=180.5571;InbreedingCoeff=0.9838;MQ=67.41;MQ0=1;MQRankSum=-11.420;QD=31.14;ReadPosRankSum=0.172;VQSLOD=4.1042;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:32:73.93:0,74,490	0/0:6,0:6:15.05:0,15,471	0/0:40,0:35:48.16:0,48,1227	0/0:29,0:28:39.12:0,39,1126	0/0:9,0:25:50.33:0,50,371	0/0:22,0:22:42.14:0,42,1286	0/0:25,0:25:51.18:0,51,1602	1/1:13,17:29:51.14:910,51,0	0/0:25,0:25:69.19:0,69,1914	1/1:10,22:31:63.17:1151,63,0	1/1:5,11:16:24.08:478,24,0	0/0:8,0:35:67.20:0,67,415	0/0:10,0:31:60.84:0,61,372	0/0:11,0:31:56.15:0,56,352	1/1:7,28:35:60.21:1233,60,0	1/1:8,14:22:28.96:679,29,0	0/0:22,0:22:45.15:0,45,1415	1/1:10,15:25:30.10:626,30,0	1/1:14,13:27:34.34:575,34,0	1/1:2,14:16:39.09:755,39,0	1/1:12,17:29:10.79:195,11,0	0/0:6,0:28:59.20:0,59,425	0/0:3,0:16:32.50:0,33,204	0/0:4,0:28:62.10:0,62,393	1/1:4,22:26:51.18:1051,51,0	1/1:10,23:33:66.23:1379,66,0	1/1:6,23:29:48.16:993,48,0	1/1:1,7:8:9.03:189,9,0
chr10	43271609	.	TATGGCCACATTTCTCAGTTGA	T	7578.65	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=10.653;DP=486;FS=0.574;HRun=0;HaplotypeScore=284.6316;InbreedingCoeff=0.9425;MQ=71.59;MQ0=0;MQRankSum=-10.210;QD=132.96;ReadPosRankSum=4.024;VQSLOD=3.9818;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:72.25:0,72,5401	0/0:14,0:14:42.14:0,42,3252	0/0:23,0:23:66.23:0,66,3699	0/0:17,0:17:51.18:0,51,3390	1/1:0,1:1:3.01:121,3,0	0/0:18,0:18:48.16:0,48,3568	0/0:20,0:20:57.20:0,57,5425	0/0:21,0:21:60.68:0,61,4558	0/0:22,0:22:66.23:0,66,5627	0/0:13,0:13:36.12:0,36,2453	0/0:8,0:8:21.05:0,21,1206	1/1:0,16:16:42.14:2464,42,0	1/1:0,13:13:30.10:1816,30,0	1/1:0,9:9:24.08:1421,24,0	0/0:29,0:29:87.30:0,87,7535	0/0:21,0:21:63.22:0,63,5569	0/0:28,0:27:84.29:0,84,8078	0/0:31,0:31:93.27:0,93,7762	0/0:16,0:16:33.32:0,33,2359	0/0:13,0:13:33.11:0,33,2273	0/0:38,0:38:99:0,114,9732	1/1:0,4:4:8.99:383,9,0	1/1:0,3:3:9.03:352,9,0	1/1:1,10:11:18.06:1022,18,0	0/0:20,0:20:57.18:0,57,4152	0/0:17,0:17:48.63:0,49,3616	0/0:20,0:20:57.20:0,57,4562	0/0:11,0:11:28.98:0,29,2373
chr10	43271736	.	A	AACT	1792.95	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-6.160;DP=657;FS=19.198;HRun=0;HaplotypeScore=102.9428;InbreedingCoeff=0.9869;MQ=70.05;MQ0=0;MQRankSum=-1.482;QD=45.97;ReadPosRankSum=0.468;VQSLOD=4.0368;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,34:39:87.30:1888,87,0	0/0:9,0:9:27.09:0,27,419	0/0:32,0:30:69.24:0,69,1092	0/0:29,0:28:57.16:0,57,839	0/0:6,0:6:18.06:0,18,285	0/0:21,0:21:54.18:0,54,856	0/0:25,0:25:66.21:0,66,1022	0/0:27,0:27:78.26:0,78,1215	0/0:34,0:34:90.31:0,90,1425	0/0:21,0:21:54.18:0,54,852	0/0:13,0:13:39.13:0,39,618	0/0:26,0:26:75.24:0,75,1162	0/0:20,0:20:60.17:0,60,914	0/0:21,0:21:60.19:0,60,928	0/0:42,0:42:99:0,111,1754	0/0:19,0:19:54.18:0,54,856	0/0:28,0:28:75.23:0,75,1124	0/0:26,0:26:72.25:0,72,1140	0/0:26,0:26:66.21:0,66,1013	0/0:15,0:15:45.11:0,45,665	0/0:51,0:51:99:0,144,2231	0/0:12,0:12:36.12:0,36,570	0/0:18,0:18:54.17:0,54,830	0/0:33,0:33:84.29:0,84,1329	0/0:18,0:18:51.17:0,51,804	0/0:21,0:21:60.20:0,60,952	0/0:18,0:18:54.18:0,54,856	0/0:7,0:7:21.07:0,21,333
chr10	43272217	.	CTG	C	14169.85	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=4.964;DP=757;FS=21.012;HRun=0;HaplotypeScore=136.4127;InbreedingCoeff=0.9443;MQ=74.89;MQ0=0;MQRankSum=-4.618;QD=29.10;ReadPosRankSum=6.031;VQSLOD=4.5941;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:71,0:71:99:0,160,2537	0/0:7,0:7:12.01:0,12,167	0/0:29,0:28:60.10:0,60,872	0/0:38,2:39:4.47:0,4,995	1/1:6,15:21:40.79:528,41,0	0/0:21,1:22:4.27:0,4,610	0/0:32,0:32:78.25:0,78,1222	1/1:9,25:34:36.34:829,36,0	0/0:26,0:26:74.97:0,75,1165	1/1:10,15:25:51.16:643,51,0	1/1:4,7:11:30.08:362,30,0	1/1:7,26:33:78.25:984,78,0	1/1:5,24:29:69.22:870,69,0	1/1:3,17:20:45.03:568,45,0	1/1:4,27:31:84.27:1059,84,0	1/1:6,18:24:59.22:725,59,0	0/0:43,0:43:99:0,105,1677	1/1:9,11:20:17.21:432,17,0	1/1:8,9:17:42.08:471,42,0	1/1:4,18:22:63.19:782,63,0	1/1:17,25:42:84.22:1016,84,0	1/1:1,18:19:45.14:568,45,0	1/1:0,20:20:51.16:643,51,0	1/1:5,41:46:99:1476,117,0	1/1:5,11:16:39.11:479,39,0	1/1:10,12:22:48.12:577,48,0	1/1:6,21:27:72.21:894,72,0	1/1:1,7:8:21.07:265,21,0
chr10	43272278	.	G	GA	14844.71	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-1.455;DP=688;FS=3.713;HRun=1;HaplotypeScore=108.2867;InbreedingCoeff=0.9936;MQ=87.76;MQ0=0;MQRankSum=-6.399;QD=41.35;ReadPosRankSum=1.176;VQSLOD=4.7236;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,75:75:99:2987,202,0	0/0:5,0:5:15.05:0,15,195	0/0:25,0:25:72.23:0,72,935	0/0:27,0:27:69.15:0,69,865	0/0:19,0:19:54.16:0,54,686	0/0:25,0:25:69.22:0,69,896	0/0:17,0:17:45.15:0,45,584	1/1:1,40:41:99:1778,120,0	0/0:25,0:25:69.21:0,69,880	1/1:1,21:22:66.20:967,66,0	1/1:0,11:11:30.10:449,30,0	0/0:25,0:25:66.21:0,66,856	0/0:19,0:19:54.18:0,54,701	0/0:19,0:19:54.18:0,54,699	1/1:2,20:22:57.19:854,57,0	1/1:1,19:20:57.19:852,57,0	0/0:38,0:38:99:0,108,1386	1/1:1,23:24:72.21:1049,72,0	1/1:1,18:20:57.15:811,57,0	1/1:1,15:16:45.11:648,45,0	1/1:0,27:27:72.24:1079,72,0	0/0:21,0:21:57.17:0,57,726	0/0:19,0:19:51.17:0,51,662	0/0:45,0:45:99:0,132,1714	1/1:0,20:20:60.20:899,60,0	1/1:2,32:34:96.33:1439,96,0	1/1:1,21:22:57.19:853,57,0	1/1:1,4:5:12.04:180,12,0
chr10	43272463	.	AGT	A	406.62	PASS	AB=0.950;AC=12;AF=0.286;AN=42;BaseQRankSum=2.845;DP=654;FS=0.936;HRun=0;HaplotypeScore=103.6662;InbreedingCoeff=0.2414;MQ=58.93;MQ0=28;MQRankSum=0.072;QD=2.41;ReadPosRankSum=1.805;VQSLOD=2.1948;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:4.82:0,5,38	./.	./.	./.	0/0:17,0:17:3.01:0,3,43	0/0:21,0:22:4.20:0,4,12	0/0:35,0:34:13.39:0,13,104	0/0:20,0:19:10.64:0,11,59	0/0:25,0:24:11.21:0,11,98	1/1:18,1:18:7.78:37,8,0	./.	0/1:23,0:23:17.91:26,0,18	0/0:12,0:12:6.19:0,6,46	0/0:17,0:17:6.26:0,6,56	1/1:16,0:16:1.29:4,1,0	1/1:16,0:16:4.43:35,4,0	0/0:30,0:29:29.86:0,30,364	0/1:28,2:29:3.46:245,0,3	0/0:15,0:15:0.28:0,0,9	./.	0/0:44,0:43:4.99:0,5,25	0/0:15,0:15:6.41:0,6,43	./.	0/1:29,0:27:10.47:63,0,10	1/1:9,8:17:2.89:32,3,0	0/1:16,3:18:9.27:91,0,9	0/0:15,0:15:8.83:0,9,77	./.
chr10	43272495	.	TGTGTGTGTGTGTGTGAGTGTGA	T	1795.51	PASS	AB=0.965;AC=24;AF=0.462;AN=52;BaseQRankSum=-3.815;DP=574;FS=15.183;HRun=0;HaplotypeScore=242.3711;InbreedingCoeff=0.0505;MQ=47.54;MQ0=46;MQRankSum=0.708;QD=5.04;ReadPosRankSum=-4.587;VQSLOD=-0.0258;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:48,0:45:99:175,0,219	0/0:11,0:9:6.02:0,6,268	./.	./.	0/0:21,0:20:3.43:0,3,20	0/1:24,0:21:3.11:3,0,763	0/0:38,0:34:6.70:0,7,531	0/1:24,0:19:1.56:2,0,3	0/1:28,0:24:19.32:19,0,920	0/1:21,0:19:82.14:82,0,560	1/1:10,0:10:2.97:20,3,0	1/1:21,0:21:19.76:300,20,0	1/1:14,0:13:15.46:194,15,0	1/1:19,0:16:13.03:233,13,0	0/1:15,0:15:66.80:67,0,341	0/1:16,0:15:41.02:42,0,41	0/0:40,0:39:64.80:0,65,3397	0/0:26,0:25:40.16:0,40,678	0/1:16,0:14:8.65:9,0,411	0/0:14,0:13:3:0,3,26	0/0:45,0:40:3.01:0,3,175	1/1:12,0:9:14.24:198,14,0	0/1:3,8:10:0:0,0,0	1/1:33,0:29:22.56:459,23,0	0/1:19,0:19:46.58:47,0,197	0/1:21,0:18:83.14:83,0,385	0/0:12,0:12:6.90:0,7,256	0/1:4,0:3:23.57:24,0,255
chr10	43272499	.	TGTGTGTGTGTGAGTGTGA	T	2529.69	PASS	AB=1.000;AC=29;AF=0.558;AN=52;BaseQRankSum=-1.417;DP=546;FS=19.350;HRun=0;HaplotypeScore=204.7859;InbreedingCoeff=0.0238;MQ=47.97;MQ0=41;MQRankSum=-0.266;QD=6.25;ReadPosRankSum=-5.342;VQSLOD=-0.0593;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:49,0:46:42.09:689,42,0	0/0:10,0:9:6.02:0,6,243	./.	./.	0/0:6,14:19:2.69:0,3,7	0/1:25,0:22:62.45:62,0,603	0/1:34,0:30:10.49:10,0,540	1/1:20,0:16:7.61:37,8,0	0/1:27,0:23:65.55:66,0,771	0/1:20,0:18:97.94:98,0,324	1/1:9,0:9:2.97:20,3,0	1/1:21,0:21:19.72:211,20,0	1/1:13,0:12:15.89:197,16,0	1/1:20,0:16:21.56:266,22,0	0/1:14,0:14:99:111,0,145	1/1:14,0:13:7.73:85,8,0	0/0:37,0:36:63.15:0,63,2928	0/1:24,0:23:73.44:73,0,249	0/1:14,0:12:26.55:27,0,279	0/0:15,0:14:0.47:0,0,1	0/0:45,0:39:3.01:0,3,125	1/1:14,0:11:18.03:241,18,0	0/1:11,0:10:0:0,0,0	1/1:33,0:29:24.98:294,25,0	0/1:21,0:21:74.79:75,0,94	0/1:18,0:16:99:103,0,192	0/0:12,0:12:5.99:0,6,163	0/1:4,0:3:23.57:24,0,191
chr10	43272509	.	TGA	T	2505.78	PASS	AB=1.000;AC=37;AF=0.712;AN=52;BaseQRankSum=6.926;DP=526;FS=4.350;HRun=0;HaplotypeScore=117.8512;InbreedingCoeff=0.6535;MQ=48.73;MQ0=37;MQRankSum=-0.135;QD=6.41;ReadPosRankSum=-2.179;VQSLOD=2.8196;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:49,0:47:62.94:490,63,0	0/0:9,0:7:3.47:0,3,26	./.	./.	0/0:17,0:16:2.94:0,3,18	0/1:26,0:23:18.68:19,0,224	0/0:37,0:33:22.81:0,23,353	1/1:17,0:13:18.49:100,18,0	0/0:17,11:24:21.08:0,21,274	1/1:18,1:17:26.86:181,27,0	0/1:10,0:10:0:0,0,0	1/1:16,4:20:27.24:254,27,0	1/1:12,1:12:19.49:144,19,0	1/1:20,1:17:29.25:245,29,0	1/1:15,0:15:31.17:162,31,0	1/1:4,11:14:13.70:77,14,0	0/0:32,0:31:41.43:0,41,756	1/1:20,0:19:30.79:221,31,0	1/1:15,0:13:20.02:97,20,0	1/1:12,0:12:2.99:25,3,0	1/1:46,0:40:1.82:5,2,0	1/1:11,1:10:3.28:87,3,0	0/1:9,0:8:0:0,0,0	1/1:29,2:28:29.08:320,29,0	1/1:20,0:20:15.37:59,15,0	1/1:18,0:17:17.84:144,18,0	0/0:12,0:12:5.42:0,5,27	1/1:3,0:3:8.42:40,8,0
chr10	43272513	.	TGTGA	T	4897.84	PASS	AB=0.903;AC=36;AF=0.667;AN=54;BaseQRankSum=4.778;DP=513;FS=2.566;HRun=0;HaplotypeScore=114.8367;InbreedingCoeff=0.5108;MQ=49.28;MQ0=35;MQRankSum=-0.835;QD=12.99;ReadPosRankSum=-2.003;VQSLOD=4.0755;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:47,1:46:62.38:472,62,0	0/0:8,0:6:6.02:0,6,137	./.	0/0:1,0:1:3.01:0,3,34	0/0:17,0:16:3:0,3,25	0/1:26,0:23:13.11:13,0,614	0/0:37,0:34:41.55:0,42,951	1/1:5,10:11:26.54:261,27,0	0/0:29,0:25:24.36:0,24,761	1/1:7,14:19:23.81:382,24,0	1/1:1,8:9:2.97:20,3,0	1/1:16,0:16:1.76:84,2,0	1/1:11,0:10:15.42:120,15,0	1/1:20,0:16:22.70:229,23,0	1/1:16,0:16:27.93:583,28,0	1/1:15,0:14:18.05:269,18,0	0/0:32,0:31:39.26:0,39,1337	1/1:18,2:20:20.41:702,20,0	1/1:4,9:11:26.96:381,27,0	0/0:1,11:12:2.41:0,2,12	1/1:8,37:39:2.88:15,3,0	0/1:11,0:9:10.21:84,0,10	0/1:9,0:8:0:0,0,0	1/1:29,0:27:18.14:154,18,0	1/1:20,0:20:21.05:355,21,0	0/1:7,12:18:23.70:493,0,24	1/1:1,10:11:6.02:114,6,0	1/1:3,0:3:9.03:167,9,0
chr10	43272517	.	AGT	A	485.02	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=7.606;DP=491;FS=20.043;HRun=0;HaplotypeScore=114.0887;InbreedingCoeff=0.3163;MQ=49.42;MQ0=33;MQRankSum=0.821;QD=1.97;ReadPosRankSum=2.936;VQSLOD=0.8900;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:43,1:42:30.15:188,30,0	0/0:6,0:4:6.02:0,6,92	0/0:2,0:1:2.97:0,3,20	0/0:3,0:1:3.01:0,3,43	0/0:17,0:16:0:0,0,0	0/1:23,0:20:0.27:0,0,496	0/0:33,0:30:22.89:0,23,780	1/1:13,0:9:1.25:14,1,0	0/0:25,0:21:39.10:0,39,607	0/1:21,0:20:39.90:48,0,40	1/1:9,0:9:1.25:3,1,0	0/1:16,0:16:0.53:1,0,1	0/0:10,0:9:2.03:0,2,5	0/0:19,0:15:4.44:0,4,14	0/1:15,0:15:11.56:63,0,12	1/1:14,0:13:10.57:50,11,0	0/0:31,1:31:26.82:0,27,909	0/1:20,0:20:43.55:78,0,44	1/1:11,0:9:11.79:46,12,0	0/0:12,0:12:2.38:0,2,37	0/0:45,0:40:2.04:0,2,6	0/0:10,0:8:0.40:0,0,1	0/1:9,0:8:0:0,0,0	0/0:29,2:29:7.13:0,7,50	1/1:18,0:18:13.73:55,14,0	0/1:19,0:18:40.76:41,0,56	1/1:10,0:10:4.53:20,5,0	1/1:4,0:4:7.84:31,8,0
chr10	43274434	.	T	TACAC	17718.68	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=-11.363;DP=702;FS=4.242;HRun=0;HaplotypeScore=117.4640;InbreedingCoeff=0.9599;MQ=64.83;MQ0=3;MQRankSum=-0.741;QD=35.16;ReadPosRankSum=1.800;VQSLOD=5.1274;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:10,31:45:53.92:1270,54,0	0/0:10,0:10:24.05:0,24,342	0/0:37,0:25:4.94:0,5,251	0/0:26,0:21:20.11:0,20,318	1/1:4,16:21:33.11:793,33,0	0/0:31,0:31:66.23:0,66,1094	0/0:32,0:33:71.92:0,72,1071	1/1:11,15:30:60.33:995,60,0	0/0:23,0:23:60.11:0,60,932	1/1:10,18:31:16.71:1221,17,0	1/1:2,10:13:9.03:221,9,0	1/1:6,13:20:21.07:513,21,0	1/1:4,9:15:24.08:588,24,0	1/1:1,19:22:47.90:1122,48,0	1/1:7,20:30:48.03:1113,48,0	1/1:7,15:23:27.09:666,27,0	0/0:37,0:37:87.30:0,87,1427	1/1:5,16:22:31.27:743,31,0	1/1:7,9:18:38.56:642,39,0	1/1:5,12:20:24.08:591,24,0	1/1:9,21:30:41.94:1034,42,0	1/1:4,15:20:23.82:529,24,0	1/1:5,21:27:44.86:1048,45,0	1/1:6,23:29:48.16:1183,48,0	1/1:2,24:28:42.11:1014,42,0	1/1:11,11:26:45.35:951,45,0	1/1:6,16:24:41.22:967,41,0	1/1:2,6:8:21.07:516,21,0
chr10	43276597	.	CT	C	8400.56	PASS	AB=0.700;AC=41;AF=0.732;AN=56;BaseQRankSum=12.443;DP=613;FS=9.461;HRun=1;HaplotypeScore=150.4801;InbreedingCoeff=0.8824;MQ=43.67;MQ0=15;MQRankSum=-10.491;QD=28.67;ReadPosRankSum=1.936;VQSLOD=3.6737;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,19:22:24.12:603,24,0	0/0:3,0:3:9.03:0,9,144	0/0:96,1:27:18.48:0,18,645	0/0:128,1:34:29.66:0,30,832	1/1:0,6:6:14.91:142,15,0	0/0:21,0:21:63.21:0,63,1000	0/0:30,0:30:90.29:0,90,1409	1/1:1,11:12:36.10:421,36,0	0/0:14,0:14:25.70:0,26,582	1/1:1,10:11:30.09:353,30,0	1/1:2,8:10:20.06:248,20,0	1/1:3,22:25:66.20:779,66,0	1/1:1,8:9:27.03:298,27,0	1/1:2,12:14:23.75:412,24,0	1/1:1,14:15:45.11:516,45,0	1/1:5,19:24:21.25:716,21,0	0/0:26,0:26:75.26:0,75,1180	1/1:2,8:10:27.03:313,27,0	1/1:1,9:10:30.09:360,30,0	1/1:0,6:6:18.06:215,18,0	0/1:12,9:21:99:186,0,150	1/1:0,14:14:38.98:436,39,0	1/1:1,9:11:30.05:339,30,0	1/1:2,16:18:29.67:268,30,0	1/1:0,7:7:21.06:247,21,0	1/1:1,24:25:75.16:878,75,0	1/1:3,7:10:24.05:269,24,0	1/1:1,12:13:11.06:402,11,0
chr10	43276599	.	CCT	C	7646.27	PASS	AB=0.969;AC=38;AF=0.679;AN=56;BaseQRankSum=11.593;DP=632;FS=16.380;HRun=0;HaplotypeScore=167.7844;InbreedingCoeff=0.6722;MQ=44.53;MQ0=16;MQRankSum=-11.515;QD=24.27;ReadPosRankSum=4.380;VQSLOD=4.7603;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:23:15.68:534,16,0	0/0:3,0:3:9.03:0,9,183	0/0:96,0:28:61.20:0,61,958	0/0:124,3:33:26.28:0,26,1060	1/1:6,0:6:5.98:105,6,0	0/0:21,0:21:63.22:0,63,1261	0/0:29,0:29:87.30:0,87,1736	1/1:13,0:13:21.03:319,21,0	0/0:13,0:13:35.89:0,36,729	1/1:12,0:12:27.21:331,27,0	0/1:9,0:9:3.19:219,0,3	1/1:22,2:24:66.20:809,66,0	1/1:9,0:9:25.21:274,25,0	1/1:15,0:15:32.49:438,32,0	1/1:16,0:16:32.61:477,33,0	1/1:26,0:27:3.97:634,4,0	0/0:27,0:27:78.27:0,78,1499	1/1:10,0:11:21.67:293,22,0	0/1:13,0:13:12.58:285,0,13	1/1:6,0:6:18.05:213,18,0	0/1:18,3:21:99:171,0,190	1/1:16,0:16:38.95:449,39,0	1/1:11,1:12:30.01:324,30,0	0/1:23,0:23:1.30:177,0,1	1/1:7,0:7:14.99:199,15,0	1/1:26,0:26:61.88:744,62,0	1/1:10,0:11:23.40:278,23,0	1/1:15,0:15:10.85:375,11,0
chr10	43276603	.	CT	C	8823.03	PASS	AB=0.619;AC=40;AF=0.714;AN=56;BaseQRankSum=11.888;DP=653;FS=12.035;HRun=2;HaplotypeScore=159.2699;InbreedingCoeff=0.7789;MQ=46.98;MQ0=17;MQRankSum=-11.050;QD=27.06;ReadPosRankSum=1.813;VQSLOD=3.0919;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,24:26:31.20:639,31,0	0/0:4,0:4:12.04:0,12,192	0/0:101,0:31:65.51:0,66,921	0/0:127,0:36:75.32:0,75,983	1/1:1,6:7:14.07:144,14,0	0/0:23,0:23:69.24:0,69,1099	0/0:28,0:28:84.29:0,84,1343	1/1:1,13:14:1.92:398,2,0	0/0:14,0:14:39.13:0,39,606	1/1:1,10:11:33.05:378,33,0	1/1:2,7:9:21.03:234,21,0	1/1:2,22:24:69.17:809,69,0	1/1:0,9:9:25.56:275,26,0	1/1:1,14:15:19.67:413,20,0	1/1:1,14:15:45.12:535,45,0	1/1:1,24:25:21.66:747,22,0	0/0:29,0:29:87.23:0,87,1327	1/1:3,9:12:28.33:343,28,0	0/1:3,11:14:52.79:393,0,53	1/1:1,6:7:18.06:220,18,0	0/1:11,10:21:99:177,0,116	1/1:0,17:17:48.14:568,48,0	1/1:2,10:12:27.06:320,27,0	1/1:1,23:24:20.42:250,20,0	1/1:0,7:7:20.99:226,21,0	1/1:3,25:28:83.46:933,83,0	1/1:0,11:11:30.09:353,30,0	1/1:1,17:18:18.18:468,18,0
chr10	43276605	.	CT	C	8718.29	PASS	AB=1.000;AC=39;AF=0.696;AN=56;BaseQRankSum=11.398;DP=662;FS=10.834;HRun=2;HaplotypeScore=162.8092;InbreedingCoeff=0.7570;MQ=47.58;MQ0=17;MQRankSum=-11.361;QD=25.87;ReadPosRankSum=1.442;VQSLOD=3.2737;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:26:29.34:622,29,0	0/0:4,0:4:12.04:0,12,180	0/0:97,1:34:74.60:0,75,1007	0/0:125,2:38:87.95:0,88,1097	1/1:7,0:7:14.07:143,14,0	0/0:23,0:23:69.23:0,69,1034	0/0:28,0:28:84.28:0,84,1258	0/1:14,0:14:2.84:397,0,3	0/0:14,0:14:33.11:0,33,494	1/1:11,0:11:33.02:365,33,0	1/1:7,4:11:21.06:249,21,0	1/1:25,0:25:70.04:796,70,0	1/1:10,0:10:24.41:261,24,0	1/1:15,0:15:38.63:436,39,0	1/1:16,0:16:48.10:539,48,0	1/1:25,0:25:24.27:734,24,0	0/0:30,0:30:87.29:0,87,1292	1/1:13,0:13:18.01:326,18,0	0/1:15,0:15:46.81:394,0,47	1/1:7,0:7:17.66:213,18,0	0/1:22,0:22:99:196,0,105	1/1:17,0:17:48.13:546,48,0	1/1:12,0:12:27.06:318,27,0	1/1:26,0:26:23.15:259,23,0	1/1:7,0:7:18.05:214,18,0	1/1:29,0:29:79.04:916,79,0	1/1:11,0:11:30.08:346,30,0	1/1:18,0:18:16.15:448,16,0
chr10	43278896	.	C	CGT	1497.49	PASS	AB=0.939;AC=20;AF=0.357;AN=56;BaseQRankSum=0.649;DP=667;FS=1.722;HRun=0;HaplotypeScore=149.1920;InbreedingCoeff=0.4782;MQ=78.98;MQ0=7;MQRankSum=-0.861;QD=5.22;ReadPosRankSum=-0.358;VQSLOD=3.3422;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,25:33:8.62:106,9,0	0/0:5,0:5:15.05:0,15,185	0/0:40,0:33:53.65:0,54,600	0/0:37,0:30:66.92:0,67,742	0/0:22,0:22:11.84:0,12,151	0/0:29,0:29:60.18:0,60,742	0/0:37,0:37:60.19:0,60,764	0/1:23,0:23:15.76:16,0,45	0/0:21,0:21:45.14:0,45,562	0/0:35,0:35:35.36:0,35,168	0/0:12,0:12:10.18:0,10,44	1/1:30,1:31:49.49:480,49,0	1/1:7,21:27:8.31:76,8,0	1/1:23,0:23:37.84:371,38,0	0/0:27,0:27:7.88:0,8,119	0/0:23,0:23:11.91:0,12,55	0/0:22,0:22:37.55:0,38,487	1/1:15,0:15:0.47:1,0,0	0/1:19,0:19:26.70:27,0,60	0/1:20,0:19:14.40:14,0,80	0/0:27,0:27:12.51:0,13,154	1/1:14,4:18:24.07:326,24,0	0/1:6,8:14:0:0,0,0	1/1:6,26:31:8.93:150,9,0	0/0:14,0:14:16.38:0,16,97	0/0:29,0:28:6.01:0,6,78	0/1:26,0:25:97.64:98,0,105	0/1:5,0:5:14.04:14,0,30
chr10	43278904	.	TGTGC	T	2942.33	PASS	AB=0.996;AC=24;AF=0.429;AN=56;BaseQRankSum=2.672;DP=666;FS=4.174;HRun=0;HaplotypeScore=150.3286;InbreedingCoeff=0.2340;MQ=70.10;MQ0=9;MQRankSum=-1.836;QD=7.56;ReadPosRankSum=-5.257;VQSLOD=0.9865;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:32,0:32:8.89:9,0,38	0/0:10,0:10:15.05:0,15,311	0/0:32,0:25:47.66:0,48,616	0/0:32,0:25:36.59:0,37,675	0/0:22,0:22:11.95:0,12,178	0/0:29,0:29:60.02:0,60,1125	0/0:33,0:33:41.08:0,41,1088	0/1:21,0:21:76.44:198,0,76	0/0:27,0:27:45.15:0,45,858	1/1:35,1:35:52.82:639,53,0	1/1:13,0:13:11.81:78,12,0	0/1:34,0:35:99:118,0,203	0/0:29,0:28:6.02:0,6,48	0/1:21,0:21:23.99:24,0,200	1/1:29,3:32:50.57:530,51,0	1/1:20,2:22:14.82:214,15,0	0/0:22,0:22:32.88:0,33,890	1/1:0,12:12:2.92:17,3,0	0/1:17,0:17:0.62:244,0,1	0/1:20,0:19:99:106,0,148	0/1:28,0:28:99:147,0,292	0/1:18,0:18:68.97:69,0,103	0/0:12,0:11:0:0,0,0	0/0:29,0:28:9.03:0,9,136	1/1:23,0:23:11.28:146,11,0	1/1:29,0:28:67.20:489,67,0	0/1:26,1:25:84.43:84,0,299	0/1:3,0:3:13.97:14,0,39
chr10	43278906	.	TGC	T	4664.37	PASS	AB=1.000;AC=33;AF=0.589;AN=56;BaseQRankSum=4.519;DP=655;FS=1.344;HRun=0;HaplotypeScore=128.5960;InbreedingCoeff=0.5748;MQ=67.51;MQ0=12;MQRankSum=-2.015;QD=10.92;ReadPosRankSum=-3.517;VQSLOD=4.2761;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:31,1:32:9.86:61,10,0	0/0:10,0:10:13.86:0,14,180	0/0:29,0:23:47.22:0,47,468	0/0:30,0:23:29.92:0,30,549	0/0:21,0:21:11.95:0,12,131	0/0:29,0:29:59.68:0,60,758	0/0:31,0:31:58.36:0,58,734	1/1:18,0:18:24.95:291,25,0	0/0:27,0:27:15.73:0,16,420	1/1:4,32:35:89.84:908,90,0	1/1:11,2:13:12.02:174,12,0	1/1:33,0:33:3.23:151,3,0	0/1:27,0:26:1.33:2,0,1	1/1:22,0:21:1.38:97,1,0	1/1:16,15:31:50.69:583,51,0	1/1:2,20:22:15.01:185,15,0	0/0:21,0:21:6.09:0,6,527	1/1:12,0:12:2.90:16,3,0	1/1:17,1:18:43.22:470,43,0	0/1:21,0:19:6.07:174,0,6	1/1:27,0:27:5.09:272,5,0	0/1:18,0:18:19.97:73,0,20	0/1:12,0:11:0:0,0,0	0/0:29,0:28:8.80:0,9,63	1/1:22,1:23:20.91:244,21,0	1/1:26,5:30:80.74:783,81,0	0/1:27,0:25:29.53:157,0,30	1/1:4,0:3:2.99:23,3,0
chr10	43278908	.	CGT	C	738.31	PASS	AB=0.992;AC=16;AF=0.286;AN=56;BaseQRankSum=5.548;DP=648;FS=3.404;HRun=0;HaplotypeScore=140.9822;InbreedingCoeff=0.4652;MQ=63.76;MQ0=12;MQRankSum=-0.548;QD=2.75;ReadPosRankSum=-0.017;VQSLOD=2.7757;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:31,0:31:10.73:11,0,14	0/0:10,0:10:5.66:0,6,82	0/0:25,0:18:12.50:0,12,125	0/0:30,0:23:17.73:0,18,136	0/0:22,0:22:8.91:0,9,66	0/0:28,0:28:35.52:0,36,321	0/0:22,10:32:25.93:0,26,306	0/0:18,0:18:19.50:0,19,131	0/0:29,0:29:7.38:0,7,211	0/1:36,0:35:1.66:173,0,2	1/1:14,0:14:11.82:79,12,0	0/0:31,0:31:8.87:0,9,32	0/0:25,0:24:8.21:0,8,45	0/1:23,0:21:3.48:3,0,27	1/1:32,0:32:15.10:221,15,0	1/1:22,0:22:14.41:95,14,0	0/1:19,1:20:3.49:3,0,312	0/0:12,0:12:1.55:0,2,4	0/1:16,0:16:35.50:61,0,36	0/1:20,0:18:1.59:2,0,125	0/0:28,0:28:12.48:0,12,238	0/0:18,0:18:11.70:0,12,82	0/0:12,0:11:0:0,0,0	0/0:28,0:27:8.97:0,9,92	1/1:23,0:23:17.68:112,18,0	1/1:31,0:30:15.35:147,15,0	0/0:28,0:26:15.72:0,16,288	0/0:4,0:3:5.99:0,6,48
chr10	43278926	.	TGA	T	933.18	PASS	AB=0.792;AC=20;AF=0.357;AN=56;BaseQRankSum=-0.221;DP=597;FS=11.922;HRun=0;HaplotypeScore=132.8903;InbreedingCoeff=0.6705;MQ=51.24;MQ0=17;MQRankSum=-0.776;QD=3.52;ReadPosRankSum=2.995;VQSLOD=1.7846;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:26.99:0,27,244	1/1:5,7:12:2.97:34,3,0	0/0:8,0:6:3:0,3,25	0/0:17,0:10:2.15:0,2,42	0/0:23,0:23:17.99:0,18,165	1/1:15,8:23:3.01:34,3,0	1/1:32,0:32:17.94:143,18,0	0/0:16,0:14:14.95:0,15,128	1/1:15,15:30:11.62:135,12,0	1/1:29,0:28:18.58:121,19,0	0/0:9,0:14:0:0,0,0	0/0:26,0:25:5.74:0,6,37	0/0:25,0:23:9.27:0,9,87	0/0:22,0:20:8.50:0,8,57	1/1:15,0:34:28.47:162,28,0	1/1:19,0:23:20.48:127,20,0	0/1:19,3:22:24.44:24,0,167	1/1:14,0:14:8.91:61,9,0	0/0:17,0:16:15.49:0,15,139	0/0:16,0:14:17.99:0,18,157	0/0:26,0:26:15.05:0,15,224	0/0:14,0:18:8.23:0,8,36	0/0:10,0:9:3:0,3,25	0/0:25,0:24:14.99:0,15,134	0/1:11,0:19:0:0,0,0	1/1:22,0:24:41.39:278,41,0	0/0:15,0:24:18.03:0,18,193	0/0:7,0:6:11.91:0,12,92
chr10	43280656	.	T	TCA	10586.37	PASS	AB=0.633;AC=29;AF=0.518;AN=56;BaseQRankSum=-9.070;DP=809;FS=2.480;HRun=0;HaplotypeScore=139.3402;InbreedingCoeff=0.3749;MQ=66.29;MQ0=2;MQRankSum=-2.451;QD=19.46;ReadPosRankSum=-0.853;VQSLOD=5.1384;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:23,18:41:45.43:954,45,0	1/1:8,0:13:12:105,12,0	0/0:31,0:21:29.34:0,29,283	0/0:40,1:35:54.04:0,54,601	0/1:10,0:21:37.69:128,0,38	1/1:10,0:17:18.01:166,18,0	1/1:26,1:41:47.95:430,48,0	0/1:19,16:36:13.70:595,0,14	1/1:15,0:37:57:508,57,0	1/1:9,17:27:18.56:675,19,0	1/1:4,7:11:15.05:235,15,0	0/0:6,0:33:71.02:0,71,349	0/0:10,0:26:36.72:0,37,182	0/0:12,0:28:42.48:0,42,209	0/1:16,24:40:1.84:924,0,2	1/1:10,27:37:36.68:1143,37,0	0/0:30,0:30:66.18:0,66,760	0/1:8,15:23:70.50:392,0,70	0/1:12,12:24:36.83:523,0,37	0/1:3,8:12:23.50:131,0,24	0/1:24,45:72:54.36:1540,0,54	0/0:10,0:28:39.67:0,40,194	0/0:2,0:15:31.25:0,31,154	0/0:8,0:33:56.62:0,57,279	1/1:7,16:23:6.59:582,7,0	0/1:12,17:29:7.12:649,0,7	1/1:6,20:28:13.99:820,14,0	0/1:4,4:8:26.50:86,0,27
chr10	43280687	.	AGC	A	1268	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.745;DP=718;FS=0.000;HRun=0;HaplotypeScore=146.1752;InbreedingCoeff=0.9885;MQ=70.09;MQ0=1;MQRankSum=-3.886;QD=33.37;ReadPosRankSum=-0.385;VQSLOD=4.5972;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,34:38:84.29:1363,84,0	0/0:15,0:15:39.13:0,39,778	0/0:30,0:25:71.41:0,71,1280	0/0:31,0:28:78.24:0,78,1416	0/0:15,0:13:26.83:0,27,547	0/0:15,0:15:33.10:0,33,668	0/0:28,0:28:72.18:0,72,1393	0/0:25,0:25:75.21:0,75,1459	0/0:30,0:30:63.15:0,63,1217	0/0:23,0:23:66.21:0,66,1264	0/0:9,0:9:24.08:0,24,474	0/0:38,0:38:99:0,111,2242	0/0:22,0:22:60.21:0,60,1207	0/0:21,0:21:63.15:0,63,1183	0/0:35,0:35:96.31:0,96,1909	0/0:33,0:33:90.28:0,90,1734	0/0:33,0:33:99:0,99,1947	0/0:16,0:16:48.12:0,48,922	0/0:23,0:23:63.22:0,63,1257	0/0:12,0:12:36.12:0,36,731	0/0:66,0:66:99:0,187,3679	0/0:22,0:22:57.19:0,57,1115	0/0:14,0:14:39.13:0,39,788	0/0:37,0:37:99:0,105,2119	0/0:20,0:20:54.16:0,54,1017	0/0:28,0:28:81.28:0,81,1630	0/0:33,0:33:90.29:0,90,1761	0/0:6,0:6:18.06:0,18,314
chr10	43281011	.	TGCGC	T	5394.76	PASS	AB=0.688;AC=27;AF=0.482;AN=56;BaseQRankSum=-8.375;DP=466;FS=64.924;HRun=0;HaplotypeScore=129.7413;InbreedingCoeff=0.7061;MQ=56.79;MQ0=14;MQRankSum=2.765;QD=19.91;ReadPosRankSum=0.009;VQSLOD=2.0935;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:22:30.07:0,30,373	0/0:7,0:7:15.05:0,15,219	1/1:7,0:4:0.24:17,0,0	0/0:10,0:6:1.53:0,2,18	0/0:13,0:13:12.04:0,12,244	0/0:24,0:24:50.76:0,51,734	0/0:22,0:19:32.38:0,32,479	1/1:0,16:16:48.03:674,48,0	0/0:24,0:24:54.79:0,55,782	1/1:1,12:13:33.11:505,33,0	0/1:1,7:8:0:0,0,0	0/0:17,0:17:28.46:0,28,302	0/0:11,0:11:24.03:0,24,281	0/0:11,0:10:9.03:0,9,147	1/1:23,0:23:3.48:42,3,0	1/1:22,0:21:8.78:97,9,0	0/1:28,0:26:20.42:20,0,49	1/1:18,0:17:44.62:710,45,0	1/1:1,18:19:51.10:727,51,0	0/1:2,15:18:0:0,0,0	1/1:50,0:49:99:1581,102,0	0/0:13,0:13:27.09:0,27,379	0/0:8,0:8:14.99:0,15,191	0/0:12,0:12:5.94:0,6,99	1/1:16,0:16:3.01:40,3,0	1/1:19,0:18:38.19:576,38,0	1/1:12,0:11:27.05:362,27,0	1/1:2,0:1:3.01:45,3,0
chr10	43281014	.	GCGCGCACACACACACACACA	G	4582.63	PASS	AB=0.950;AC=23;AF=0.411;AN=56;BaseQRankSum=-6.465;DP=455;FS=10.246;HRun=0;HaplotypeScore=227.0482;InbreedingCoeff=0.1385;MQ=55.41;MQ0=15;MQRankSum=1.388;QD=15.22;ReadPosRankSum=-0.373;VQSLOD=2.6363;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:19:30.08:0,30,721	0/0:7,0:7:15.05:0,15,227	1/1:6,0:3:0.02:16,0,0	0/0:9,0:5:1.69:0,2,19	0/0:14,0:13:12.04:0,12,525	0/1:24,0:24:16.03:16,0,720	0/0:22,0:19:32.94:0,33,449	1/1:16,0:16:48.03:674,48,0	0/1:23,0:23:66.49:66,0,807	1/1:13,0:13:30.99:457,31,0	0/1:7,0:7:0:0,0,0	0/1:16,0:16:99:179,0,257	0/0:10,0:10:24.03:0,24,281	0/0:11,0:10:9.03:0,9,147	1/1:0,23:23:6.49:295,6,0	1/1:2,17:19:8.62:469,9,0	0/0:28,0:26:35.07:0,35,1654	0/1:18,0:17:85.75:456,0,86	0/1:19,0:19:99:513,0,182	0/1:16,0:16:0:0,0,0	0/1:50,0:49:99:857,0,772	0/0:13,0:13:27.56:0,28,380	0/0:8,0:8:15.04:0,15,191	0/0:12,0:12:5.84:0,6,99	1/1:0,0:16:3.01:30,3,0	0/1:2,0:17:99:418,0,142	0/1:11,0:11:99:100,0,250	0/1:4,0:3:35.53:36,0,156
chr10	43281018	.	GCACACACACACACACA	G	1053.09	PASS	AC=14;AF=0.333;AN=42;BaseQRankSum=5.155;DP=478;FS=10.171;HRun=0;HaplotypeScore=211.4152;InbreedingCoeff=0.6366;MQ=53.44;MQ0=18;MQRankSum=-3.847;QD=7.16;ReadPosRankSum=0.486;VQSLOD=1.8562;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:19:12.04:0,12,255	./.	./.	./.	0/0:16,0:15:6.02:0,6,320	1/1:19,4:23:3:130,3,0	1/1:22,0:19:2.66:38,3,0	0/0:20,0:20:10.62:0,11,54	1/1:20,5:25:6.02:253,6,0	0/0:19,0:19:8.70:0,9,75	./.	1/1:14,0:14:6.02:223,6,0	./.	./.	1/1:25,0:25:6.49:186,6,0	1/1:19,0:18:9.03:317,9,0	0/0:28,0:26:36.12:0,36,1212	0/0:19,0:17:12.35:0,12,91	0/0:22,0:22:14.28:0,14,219	0/0:21,0:20:3.01:0,3,60	0/0:54,0:52:43.55:0,44,835	0/0:13,0:13:0.47:0,0,1	0/0:6,0:6:0:0,0,0	./.	1/1:17,0:16:3.01:45,3,0	0/0:18,0:17:12.87:0,13,166	0/0:12,0:11:14.34:0,14,215	0/0:4,0:3:6.02:0,6,115
chr10	43282647	.	C	CG	2939.71	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-10.686;DP=678;FS=4.878;HRun=3;HaplotypeScore=64.1135;InbreedingCoeff=0.9507;MQ=85.77;MQ0=0;MQRankSum=-2.859;QD=33.03;ReadPosRankSum=1.033;VQSLOD=4.0699;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,129,1502	1/1:0,8:8:18.06:251,18,0	0/0:26,0:26:61.86:0,62,657	0/0:20,0:20:45.12:0,45,507	0/0:25,0:25:69.21:0,69,824	1/1:2,22:24:60.20:838,60,0	1/1:2,22:24:54.18:755,54,0	0/0:29,0:29:78.03:0,78,838	1/1:2,31:33:90.30:1255,90,0	0/0:37,0:37:99:0,105,1226	0/0:15,0:15:38.67:0,39,417	0/0:24,0:24:63.16:0,63,735	0/0:23,0:23:60.18:0,60,718	0/0:24,0:24:66.20:0,66,790	0/0:21,0:21:63.19:0,63,755	0/0:18,0:18:54.15:0,54,627	0/0:30,0:30:90.22:0,90,1049	0/0:39,0:39:99:0,111,1268	0/0:20,0:20:56.85:0,57,622	0/0:22,0:22:57.13:0,57,664	0/0:46,0:46:99:0,129,1436	0/0:19,0:19:50.67:0,51,605	0/0:13,0:13:39.12:0,39,466	0/0:33,0:33:90.26:0,90,1062	0/0:19,0:19:54.16:0,54,647	0/0:23,0:23:63.17:0,63,735	0/0:16,0:16:42.12:0,42,491	0/0:2,0:2:3.01:0,3,36
chr10	43284003	.	TTTGGACATGACAACCACA	T	13298.95	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=14.336;DP=657;FS=5.293;HRun=0;HaplotypeScore=313.1354;InbreedingCoeff=0.9961;MQ=81.79;MQ0=0;MQRankSum=-14.340;QD=98.51;ReadPosRankSum=4.324;VQSLOD=3.9810;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,114,9046	0/0:16,0:16:45.15:0,45,3692	0/0:20,0:20:54.19:0,54,2849	0/0:24,0:24:55.60:0,56,3977	0/0:23,0:23:63.22:0,63,5365	0/0:22,0:22:66.23:0,66,5264	0/0:39,0:39:99:0,111,8857	0/0:30,0:30:84.29:0,84,6091	0/0:30,0:30:90.30:0,90,7506	0/0:26,0:26:78.27:0,78,6315	0/0:15,0:15:45.14:0,45,3332	1/1:2,27:29:60.21:3093,60,0	1/1:5,19:24:45.15:2320,45,0	1/1:3,21:24:51.18:2628,51,0	0/0:27,0:27:78.27:0,78,6535	0/0:19,0:19:57.18:0,57,4555	0/0:44,0:44:99:0,129,10233	0/0:27,0:27:81.28:0,81,6577	0/0:15,0:15:36.12:0,36,2613	0/0:13,0:13:36.12:0,36,2872	0/0:22,0:22:66.23:0,66,5145	1/1:1,19:20:42.14:2165,42,0	1/1:2,21:23:45.15:2319,45,0	1/1:6,9:15:15.05:773,15,0	0/0:9,0:9:27.09:0,27,2365	0/0:26,0:26:69.24:0,69,5608	0/0:27,0:27:78.27:0,78,5893	0/0:8,0:8:24.08:0,24,1413
chr10	43285554	.	C	CGACTA	3915.57	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=7.936;DP=470;FS=26.357;HRun=0;HaplotypeScore=107.1529;InbreedingCoeff=0.9622;MQ=79.20;MQ0=0;MQRankSum=-9.532;QD=55.15;ReadPosRankSum=0.300;VQSLOD=1.5459;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:90.31:0,90,1844	0/0:8,0:8:15.05:0,15,288	0/0:15,0:15:25.24:0,25,601	0/0:15,0:15:13.42:0,13,429	0/0:11,0:11:33.11:0,33,662	0/0:25,0:25:66.12:0,66,1244	0/0:29,0:29:75.22:0,75,1504	0/0:29,0:29:78.27:0,78,1581	0/0:8,0:8:18.06:0,18,373	0/0:18,0:18:45.15:0,45,891	0/0:9,0:9:24.07:0,24,462	1/1:3,11:15:39.13:1059,39,0	1/1:4,3:7:12.04:341,12,0	1/1:6,8:14:27.09:744,27,0	0/0:14,0:13:33.11:0,33,684	0/0:5,0:5:12.04:0,12,244	0/0:28,0:28:75.26:0,75,1549	0/0:28,0:27:72.25:0,72,1470	0/0:18,0:18:48.16:0,48,954	0/0:6,0:6:18.05:0,18,330	0/0:47,0:47:99:0,120,2445	1/1:4,12:16:30.10:824,30,0	1/1:2,3:5:9.03:258,9,0	1/1:8,6:13:27.55:688,28,0	0/0:13,0:13:33.07:0,33,605	0/0:19,0:19:54.18:0,54,1068	0/0:11,0:11:27.09:0,27,559	0/0:8,0:8:21.07:0,21,435
chr10	43285561	.	CG	C	1076.29	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=8.853;DP=448;FS=47.289;HRun=4;HaplotypeScore=72.3945;InbreedingCoeff=0.9439;MQ=76.06;MQ0=0;MQRankSum=-7.865;QD=17.36;ReadPosRankSum=-1.449;VQSLOD=0.3793;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,99,1342	0/0:6,0:6:15.04:0,15,194	0/0:12,0:12:14.01:0,14,205	0/0:12,0:12:11.22:0,11,259	0/0:13,0:13:33.11:0,33,461	0/0:22,0:22:63.14:0,63,822	0/0:29,0:29:72.22:0,72,977	0/0:30,0:30:78.26:0,78,1087	0/0:9,0:9:23.98:0,24,260	0/0:17,0:17:45.14:0,45,600	0/0:7,0:7:21.06:0,21,277	1/1:3,12:15:41.99:381,42,0	1/1:1,6:7:18.03:178,18,0	1/1:2,8:10:26.98:239,27,0	0/0:14,0:13:36.12:0,36,502	0/0:5,0:5:12.04:0,12,166	0/0:26,0:26:72.24:0,72,1008	0/0:29,0:28:78.24:0,78,1062	0/0:18,0:18:54.18:0,54,755	0/0:5,0:5:12.04:0,12,167	0/0:51,0:51:99:0,141,1872	1/1:0,16:16:29.89:252,30,0	1/1:0,3:3:6:55,6,0	1/1:1,10:11:15.01:151,15,0	0/0:10,0:10:27.09:0,27,377	0/0:18,0:18:51.17:0,51,710	0/0:11,0:11:30.05:0,30,384	0/0:7,0:7:21.07:0,21,294
chr10	43285662	.	CGAGAGA	C	9450.09	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=3.818;DP=428;FS=4.737;HRun=0;HaplotypeScore=134.7405;InbreedingCoeff=0.8089;MQ=73.14;MQ0=1;MQRankSum=-9.681;QD=28.29;ReadPosRankSum=4.875;VQSLOD=4.4211;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:18:45.15:619,45,0	1/1:0,4:4:5.37:99,5,0	0/0:27,0:25:64.63:0,65,1519	0/0:25,0:20:42.06:0,42,899	1/1:1,12:13:27.09:592,27,0	1/1:11,13:24:30.10:660,30,0	1/1:4,21:25:45.15:956,45,0	1/1:10,19:30:50.71:861,51,0	1/1:1,8:9:21.07:462,21,0	1/1:6,0:10:14.07:71,14,0	1/1:2,0:8:15.52:80,16,0	1/1:0,5:5:15.05:321,15,0	1/1:9,13:22:36.12:791,36,0	1/1:5,5:10:21.03:383,21,0	1/1:1,0:12:27.86:180,28,0	1/1:8,0:15:23.33:150,23,0	0/0:41,0:42:68.44:0,68,3231	1/1:3,0:18:41.49:290,41,0	1/1:5,6:10:18.03:302,18,0	1/1:2,6:8:24.08:527,24,0	1/1:5,14:19:22.01:428,22,0	1/1:2,4:6:9.03:198,9,0	1/1:3,4:7:2.84:66,3,0	1/1:5,9:14:15.05:330,15,0	1/1:2,0:10:21.73:112,22,0	1/1:1,0:15:24.59:182,25,0	1/1:5,13:18:32.85:725,33,0	1/1:1,2:3:3.01:66,3,0
chr10	43285722	.	TG	T	358.56	PASS	AC=12;AF=0.222;AN=54;BaseQRankSum=4.609;DP=344;FS=1.442;HRun=3;HaplotypeScore=125.1556;InbreedingCoeff=0.8638;MQ=57.24;MQ0=3;MQRankSum=-5.074;QD=7.32;ReadPosRankSum=1.886;VQSLOD=0.7732;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,1:34:43.44:0,43,234	0/0:3,0:3:6.85:0,7,62	0/0:8,0:7:8.85:0,9,184	0/0:11,0:7:14.23:0,14,190	0/0:10,0:9:11.79:0,12,94	0/0:16,0:16:32.65:0,33,271	0/0:21,0:21:40.18:0,40,423	0/0:26,0:25:48.60:0,49,342	0/0:8,0:8:17.77:0,18,138	0/0:15,0:15:19.93:0,20,165	0/0:6,0:6:5.90:0,6,40	1/1:2,2:4:4.35:22,4,0	1/1:8,1:9:22.95:137,23,0	1/1:5,4:9:16.28:85,16,0	0/0:7,0:7:17.76:0,18,151	0/0:11,0:10:31.22:0,31,258	0/0:43,0:43:99:0,114,1577	0/0:12,0:11:26.45:0,26,246	0/0:15,0:15:38.31:0,38,312	0/0:12,0:12:23.44:0,23,183	0/0:7,0:7:5.85:0,6,52	1/1:7,1:8:9.89:75,10,0	1/1:6,4:10:20.90:133,21,0	1/1:7,2:9:16.28:78,16,0	0/0:10,0:10:17.56:0,18,153	0/0:10,0:10:23.91:0,24,233	0/0:9,0:9:17.66:0,18,149	./.
chr10	43285724	.	G	GT	459.36	PASS	AB=0.667;AC=11;AF=0.204;AN=54;BaseQRankSum=1.460;DP=331;FS=3.982;HRun=0;HaplotypeScore=123.7710;InbreedingCoeff=0.7057;MQ=57.79;MQ0=3;MQRankSum=-3.753;QD=10.44;ReadPosRankSum=1.276;VQSLOD=4.2556;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:67.64:0,68,845	0/0:3,0:3:8.99:0,9,97	0/0:8,0:7:17.62:0,18,226	0/0:11,0:7:9.22:0,9,228	0/0:9,0:8:10.58:0,11,119	0/0:16,0:16:32.40:0,32,349	0/0:21,0:21:48.04:0,48,586	0/0:23,0:22:48.73:0,49,385	0/0:8,0:8:17.91:0,18,190	0/0:15,0:15:4.89:0,5,236	0/0:5,0:5:6.02:0,6,76	1/1:3,1:4:7.85:79,8,0	1/1:5,3:8:2.14:92,2,0	1/1:5,3:8:6.74:114,7,0	0/0:7,0:7:17.27:0,17,192	0/0:11,0:10:32.88:0,33,378	0/0:40,0:40:99:0,117,1614	0/0:12,0:11:26.72:0,27,311	0/0:15,0:15:41.95:0,42,418	0/0:10,0:10:19.06:0,19,183	0/0:7,0:7:6.01:0,6,61	0/1:3,4:8:0.34:83,0,0	1/1:6,3:9:2.97:100,3,0	1/1:2,5:7:12.27:137,12,0	0/0:11,0:11:17.93:0,18,230	0/0:10,0:10:23.89:0,24,264	0/0:7,0:7:18.01:0,18,197	./.
chr10	43285725	.	G	GT	1151.40	PASS	AB=0.981;AC=34;AF=0.630;AN=54;BaseQRankSum=2.102;DP=333;FS=10.487;HRun=9;HaplotypeScore=121.2097;InbreedingCoeff=0.3213;MQ=57.62;MQ0=3;MQRankSum=-5.405;QD=5.70;ReadPosRankSum=-3.215;VQSLOD=-0.0139;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:39.58:0,40,115	0/0:3,0:3:4.56:0,5,19	0/0:8,0:7:11.89:0,12,92	0/0:11,0:7:8.90:0,9,69	0/0:10,0:9:3.03:0,3,19	0/1:14,2:16:9.96:32,0,10	0/0:21,0:21:4.07:0,4,46	1/1:22,1:22:28.18:238,28,0	0/1:7,0:7:8.72:33,0,9	0/1:16,0:16:6.20:14,0,6	1/1:5,0:5:0.89:2,1,0	1/1:4,0:4:8.98:86,9,0	1/1:8,0:8:8.25:97,8,0	1/1:8,0:8:10.10:128,10,0	1/1:7,0:7:2.89:31,3,0	1/1:11,0:10:6.16:41,6,0	0/0:40,0:40:99:0,108,932	0/1:12,0:11:18.65:31,0,19	1/1:15,0:15:0.09:90,0,0	1/1:10,0:10:0:47,0,0	1/1:5,1:6:2.68:11,3,0	1/1:8,0:8:6.53:95,7,0	1/1:9,0:9:12.03:129,12,0	1/1:7,0:7:13.83:147,14,0	0/1:13,0:13:7.21:7,0,19	1/1:10,0:10:6.15:56,6,0	0/1:7,0:7:0.42:0,0,11	./.
chr10	43285730	.	TTTTTG	T	2302.32	PASS	AB=1.000;AC=26;AF=0.481;AN=54;BaseQRankSum=4.344;DP=313;FS=4.956;HRun=0;HaplotypeScore=125.4209;InbreedingCoeff=-0.5022;MQ=54.57;MQ0=4;MQRankSum=-5.552;QD=9.14;ReadPosRankSum=1.386;VQSLOD=2.5673;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:4,32:36:66.14:1206,66,0	1/1:3,0:3:5.18:30,5,0	0/0:7,0:6:8.25:0,8,111	0/0:9,0:5:11.58:0,12,99	0/1:9,0:8:30.80:83,0,31	0/1:15,0:15:13.94:120,0,14	0/1:19,0:19:30.20:30,0,100	0/1:23,0:22:59.84:70,0,60	0/1:8,0:8:14.56:44,0,15	0/1:15,0:15:49.32:65,0,49	1/1:4,0:4:3.01:31,3,0	0/0:4,0:4:10.11:0,10,52	0/1:5,0:5:14.08:22,0,14	0/1:8,0:8:33.41:45,0,33	0/1:7,0:7:24.21:65,0,24	0/1:9,0:8:21.85:115,0,22	0/0:40,0:40:81.79:0,82,2388	0/1:11,0:10:4.79:5,0,60	0/1:11,0:11:22.66:100,0,23	0/1:9,0:9:52.71:66,0,53	0/1:3,0:3:13.72:26,0,14	0/1:8,0:8:44.82:45,0,45	0/1:9,0:9:7.87:106,0,8	0/1:7,0:7:19.15:19,0,22	0/1:17,0:17:31.97:93,0,32	0/1:9,0:9:18.68:19,0,19	0/1:7,0:7:27.90:56,0,28	./.
chr10	43285733	.	TTGTTTGTTTGTTTGTTTG	T	2841.64	PASS	AB=1.000;AC=25;AF=0.463;AN=54;BaseQRankSum=0.031;DP=312;FS=14.356;HRun=0;HaplotypeScore=195.8750;InbreedingCoeff=-0.0152;MQ=52.47;MQ0=4;MQRankSum=-3.162;QD=14.57;ReadPosRankSum=-2.012;VQSLOD=1.5389;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:69.24:0,69,3020	0/1:4,0:4:7.94:8,0,69	0/0:7,0:6:1.72:0,2,80	0/1:10,0:4:1.95:2,0,192	0/0:11,0:10:17.31:0,17,440	0/1:14,0:14:42.83:43,0,241	0/1:19,0:19:29.20:29,0,219	0/1:20,0:19:99:143,0,350	0/1:7,0:7:2.26:2,0,210	0/1:16,0:16:52.23:52,0,92	0/0:3,0:3:2.84:0,3,14	1/1:4,0:4:9.03:174,9,0	1/1:3,1:4:11.85:256,12,0	1/1:5,3:8:17.71:445,18,0	0/1:10,0:10:7.40:7,0,293	0/0:8,0:7:15.70:0,16,200	0/0:38,0:38:99:0,108,6283	0/1:9,0:8:77.42:80,0,77	0/1:12,0:12:99:116,0,122	0/0:11,0:11:1.15:0,1,257	0/0:4,0:4:5.92:0,6,98	1/1:7,1:8:9.75:447,10,0	1/1:4,4:8:24.06:780,24,0	1/1:5,2:7:20.44:257,20,0	0/1:17,0:17:16.28:16,0,39	0/1:9,0:9:36.34:80,0,36	0/1:9,0:9:72.86:73,0,172	./.
chr10	43285734	.	TG	T	2703.14	PASS	AB=0.917;AC=48;AF=0.889;AN=54;BaseQRankSum=6.323;DP=314;FS=4.512;HRun=1;HaplotypeScore=107.6138;InbreedingCoeff=0.4844;MQ=52.43;MQ0=4;MQRankSum=-6.728;QD=10.09;ReadPosRankSum=-3.678;VQSLOD=0.1878;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:33,1:34:62.06:312,62,0	1/1:3,1:4:6.82:76,7,0	0/0:7,0:6:12.94:0,13,98	0/1:10,1:4:1.99:2,0,63	1/1:6,3:10:13.62:114,14,0	1/1:10,2:14:17.84:143,18,0	1/1:17,2:19:9.35:153,9,0	1/1:15,5:19:42.86:250,43,0	1/1:6,0:7:5.68:72,6,0	1/1:11,6:19:35.99:247,36,0	1/1:0,3:3:2.99:24,3,0	1/1:1,2:3:2.45:10,2,0	1/1:4,0:4:9.61:34,10,0	1/1:6,1:7:14.27:53,14,0	1/1:8,2:10:24.83:189,25,0	1/1:6,1:6:17.73:129,18,0	0/0:38,0:38:99:0,107,1369	1/1:8,2:9:5.79:92,6,0	1/1:7,5:12:29.27:226,29,0	1/1:8,3:11:20.90:155,21,0	1/1:4,0:4:6.47:52,6,0	1/1:6,0:6:12.01:47,12,0	1/1:8,0:8:20.93:94,21,0	1/1:7,0:7:12.99:53,13,0	1/1:2,3:17:8.97:97,9,0	0/1:10,1:11:16.71:101,0,17	1/1:8,1:9:13.44:117,13,0	./.
chr10	43285738	.	TG	T	2124	PASS	AB=0.958;AC=39;AF=0.696;AN=56;BaseQRankSum=4.741;DP=334;FS=1.031;HRun=1;HaplotypeScore=108.4467;InbreedingCoeff=0.5389;MQ=49.83;MQ0=5;MQRankSum=-5.105;QD=9.48;ReadPosRankSum=-4.296;VQSLOD=-0.3177;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:56.04:0,56,326	1/1:3,0:3:2.87:56,3,0	0/0:9,0:7:7.91:0,8,105	0/0:10,2:3:6.02:0,6,88	1/1:10,1:12:13.64:132,14,0	1/1:14,2:16:15.04:132,15,0	1/1:20,1:21:7.08:187,7,0	1/1:12,3:16:31.98:153,32,0	1/1:7,0:7:3.48:65,3,0	1/1:19,0:20:42.27:282,42,0	1/1:4,1:4:5.92:39,6,0	0/0:1,2:3:4.87:0,5,19	0/0:4,0:4:0.68:0,1,42	0/1:6,1:7:3.93:4,0,55	1/1:8,2:9:18.85:151,19,0	1/1:5,1:5:14.11:103,14,0	0/0:39,0:39:99:0,110,1641	1/1:12,1:12:3.75:118,4,0	1/1:8,5:13:29.05:210,29,0	1/1:9,3:12:24.41:197,24,0	1/1:3,0:3:5.97:46,6,0	0/1:6,0:6:3.49:3,0,35	0/1:9,0:8:9.88:10,0,43	0/0:7,0:7:4:0,4,56	1/1:14,1:16:5.79:87,6,0	1/1:1,11:12:20.31:162,20,0	1/1:10,1:11:10.60:107,11,0	1/1:4,0:3:8.76:55,9,0
chr10	43285742	.	TG	T	1843.12	PASS	AB=0.987;AC=36;AF=0.643;AN=56;BaseQRankSum=5.840;DP=327;FS=1.674;HRun=1;HaplotypeScore=106.7260;InbreedingCoeff=0.2135;MQ=43.19;MQ0=6;MQRankSum=-5.515;QD=8.12;ReadPosRankSum=-2.408;VQSLOD=0.1200;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:69.86:0,70,489	0/1:3,0:3:3.25:20,0,3	0/0:5,1:4:3.95:0,4,43	0/0:13,0:2:6.02:0,6,88	0/1:12,1:12:0.85:119,0,1	1/1:13,1:14:3.81:71,4,0	0/1:15,1:16:32.91:64,0,33	1/1:12,3:14:22.79:106,23,0	0/1:7,0:7:2.24:61,0,2	1/1:19,0:19:29.42:223,29,0	1/1:5,1:5:5.94:41,6,0	0/1:7,0:7:8.56:9,0,41	0/1:5,0:5:7.12:16,0,7	0/1:7,0:7:4.75:5,0,47	1/1:7,0:8:17.43:129,17,0	1/1:5,0:4:14.29:105,14,0	0/0:38,0:38:94.66:0,95,1574	0/1:14,0:13:8.81:114,0,9	1/1:6,1:10:22.89:158,23,0	1/1:8,0:10:9.13:165,9,0	1/1:4,0:4:5.98:48,6,0	0/1:7,0:7:6.45:21,0,6	1/1:10,0:9:17.75:59,18,0	0/0:7,0:7:1.05:0,1,58	0/1:16,0:16:7.76:76,0,8	1/1:11,1:12:19.15:141,19,0	1/1:9,0:10:8.52:106,9,0	1/1:6,1:6:17.96:150,18,0
chr10	43285746	.	TG	T	2087.36	PASS	AB=0.932;AC=40;AF=0.714;AN=56;BaseQRankSum=5.694;DP=323;FS=1.067;HRun=1;HaplotypeScore=97.1469;InbreedingCoeff=0.0275;MQ=43.10;MQ0=7;MQRankSum=-5.013;QD=8.84;ReadPosRankSum=-2.917;VQSLOD=0.1117;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:75.72:0,76,541	0/1:3,0:3:19.42:19,0,33	0/1:5,0:2:11.40:11,0,32	0/0:13,1:3:6.02:0,6,88	0/1:11,1:11:12.60:166,0,13	0/1:11,0:12:11.44:59,0,11	0/1:15,0:16:36.40:113,0,36	0/1:17,0:16:47.72:48,0,114	1/1:6,0:6:0.44:42,0,0	1/1:18,0:18:16.94:116,17,0	1/1:6,0:6:5.94:41,6,0	0/1:5,2:7:9.08:90,0,9	1/1:4,1:5:11.16:89,11,0	1/1:4,1:5:8.34:58,8,0	1/1:9,0:8:17.27:127,17,0	1/1:6,0:5:15.47:93,15,0	0/0:35,1:36:74.55:0,75,1450	0/1:15,0:14:39.98:110,0,40	1/1:11,0:10:8.83:117,9,0	1/1:11,0:11:2.81:159,3,0	1/1:4,0:4:5.99:51,6,0	0/1:4,2:6:10.93:81,0,11	1/1:7,3:9:21.65:189,22,0	1/1:6,0:6:11.57:66,12,0	0/1:16,0:16:11.95:70,0,12	1/1:11,0:11:12.32:99,12,0	1/1:10,0:10:6.79:86,7,0	1/1:8,0:6:17.96:157,18,0
chr10	43285977	.	AGTGTGTGTGTGTGTGTGT	A	3189.13	PASS	AC=20;AF=0.417;AN=48;BaseQRankSum=7.049;DP=489;FS=7.875;HRun=0;HaplotypeScore=218.5584;InbreedingCoeff=0.7817;MQ=64.31;MQ0=17;MQRankSum=-5.630;QD=19.45;ReadPosRankSum=0.674;VQSLOD=1.4475;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:30:36.12:0,36,1819	./.	./.	./.	0/0:13,0:12:9.03:0,9,514	0/0:18,0:19:27.09:0,27,1647	0/0:23,0:25:31.05:0,31,1518	0/0:36,0:33:18.04:0,18,237	0/0:16,0:16:18.06:0,18,1311	0/0:10,0:10:16.61:0,17,644	0/0:7,0:8:9.03:0,9,443	1/1:9,2:11:6.02:290,6,0	1/1:15,8:23:18.06:870,18,0	1/1:11,5:15:12.04:580,12,0	0/0:16,0:18:21.07:0,21,1091	0/0:15,0:15:21.07:0,21,978	0/0:19,0:24:39.13:0,39,1693	0/0:17,0:21:40.65:0,41,1612	1/1:17,4:21:2.54:325,3,0	1/1:7,1:8:3.01:145,3,0	1/1:27,0:26:3.01:94,3,0	1/1:8,4:12:6.02:182,6,0	./.	1/1:24,6:29:9.07:299,9,0	0/0:8,0:11:9.03:0,9,417	0/0:20,0:20:18.06:0,18,750	1/1:7,5:12:8.94:434,9,0	1/1:2,2:3:3.01:145,3,0
chr10	43287026	.	CA	C	6028.70	PASS	AB=0.907;AC=30;AF=0.536;AN=56;BaseQRankSum=3.296;DP=486;FS=5.412;HRun=1;HaplotypeScore=67.0693;InbreedingCoeff=0.7735;MQ=82.86;MQ0=1;MQRankSum=-3.419;QD=23.83;ReadPosRankSum=-0.651;VQSLOD=4.4532;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,47:48:99:1390,103,0	0/0:8,0:8:24.08:0,24,316	0/0:29,0:28:84.14:0,84,993	0/0:31,0:30:71.57:0,72,859	0/1:26,1:27:99:127,0,100	0/0:22,0:22:66.17:0,66,852	0/0:26,0:26:74.03:0,74,969	0/1:14,3:17:1.29:99,0,1	0/0:19,0:19:54.16:0,54,734	1/1:0,16:16:45.11:589,45,0	1/1:1,12:13:27.09:373,27,0	0/0:15,1:16:6.29:0,6,102	0/0:11,0:11:8.55:0,9,50	0/0:12,0:12:18.77:0,19,92	1/1:0,9:9:21.07:291,21,0	1/1:0,13:13:36.12:500,36,0	0/0:36,0:36:99:0,108,1363	1/1:0,22:22:54.18:746,54,0	1/1:10,4:14:34.90:258,35,0	1/1:5,0:5:0.26:21,0,0	1/1:13,3:16:23.53:198,24,0	0/0:14,0:14:6.55:0,7,23	1/1:5,0:5:6.68:40,7,0	0/0:9,0:8:2.68:0,3,11	1/1:1,12:13:33.02:433,33,0	1/1:1,16:17:50.46:618,50,0	1/1:6,6:12:31.81:243,32,0	1/1:5,1:6:12.87:102,13,0
chr10	43287028	.	CCA	C	697.91	PASS	AB=1.000;AC=10;AF=0.179;AN=56;BaseQRankSum=0.606;DP=489;FS=0.000;HRun=0;HaplotypeScore=93.9839;InbreedingCoeff=0.6721;MQ=80.47;MQ0=1;MQRankSum=-2.969;QD=10.42;ReadPosRankSum=-4.412;VQSLOD=2.4959;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:76.68:0,77,925	0/0:8,0:8:24.08:0,24,401	0/0:29,0:28:78.26:0,78,1265	0/0:28,0:27:64.09:0,64,1155	0/0:28,0:28:62.33:0,62,688	0/0:22,0:22:66.21:0,66,1157	0/0:26,0:26:75.11:0,75,1401	0/1:16,0:16:19.31:104,0,19	0/0:19,0:19:54.18:0,54,998	0/0:16,0:16:45.97:0,46,461	0/0:13,0:13:25.29:0,25,246	0/0:17,0:17:36.12:0,36,578	0/0:11,0:11:9:0,9,127	0/0:12,0:12:21.07:0,21,329	0/0:10,0:10:22.59:0,23,218	0/0:14,0:14:35.57:0,36,353	0/0:36,0:36:99:0,105,1910	0/0:23,0:23:53.61:0,54,554	1/1:11,1:12:19.55:211,20,0	0/1:5,0:5:9.05:20,0,9	1/1:14,1:15:12:110,12,0	0/0:14,0:14:11.77:0,12,146	0/0:7,0:7:2.85:0,3,24	0/0:9,0:8:3.01:0,3,47	0/0:14,0:14:31.92:0,32,295	0/0:17,0:17:45.35:0,45,408	1/1:12,1:13:29.79:315,30,0	1/1:5,1:6:11.98:100,12,0
chr10	43287029	.	CA	C	541.08	PASS	AB=0.967;AC=10;AF=0.179;AN=56;BaseQRankSum=2.105;DP=482;FS=0.000;HRun=1;HaplotypeScore=87.3778;InbreedingCoeff=0.6664;MQ=79.15;MQ0=1;MQRankSum=-3.624;QD=8.73;ReadPosRankSum=-4.439;VQSLOD=-0.7485;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:57.16:0,57,286	0/0:8,0:8:24.08:0,24,364	0/0:28,0:27:78.24:0,78,1128	0/0:27,0:26:74.42:0,74,1053	0/0:25,0:25:63.43:0,63,633	0/0:23,0:23:66.21:0,66,1009	0/0:26,0:26:75.07:0,75,1167	0/1:13,1:14:24.15:105,0,24	0/0:19,0:19:54.18:0,54,851	0/0:17,0:17:42.15:0,42,224	0/0:14,0:14:15.93:0,16,60	0/0:16,0:16:36.09:0,36,443	0/0:11,0:11:9.02:0,9,111	0/0:12,0:12:20.74:0,21,274	0/0:11,0:11:20.48:0,20,96	0/0:15,0:15:26.64:0,27,124	0/0:35,0:35:99:0,105,1613	0/0:22,0:22:46.77:0,47,202	1/1:11,3:14:24.74:180,25,0	0/1:5,0:5:11.31:20,0,11	1/1:10,1:11:12.47:96,12,0	0/0:16,0:16:13.68:0,14,147	0/0:5,0:5:2.85:0,3,24	0/0:9,0:8:3.01:0,3,37	0/0:14,0:14:26.99:0,27,118	0/0:17,0:17:34.27:0,34,150	1/1:8,4:12:29.31:203,29,0	1/1:6,0:6:11.98:99,12,0
chr10	43287454	.	TA	T	1116.35	PASS	AB=1.000;AC=12;AF=0.214;AN=56;BaseQRankSum=2.130;DP=313;FS=1.535;HRun=1;HaplotypeScore=52.0847;InbreedingCoeff=0.6005;MQ=81.75;MQ0=0;MQRankSum=-0.559;QD=13.61;ReadPosRankSum=5.979;VQSLOD=2.7638;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:15,0:17:1.66:2,0,39	1/1:0,4:4:9.03:124,9,0	0/0:4,0:4:5.19:0,5,81	0/0:16,0:16:4.35:0,4,310	0/0:15,0:15:45.06:0,45,612	1/1:0,7:7:12.04:166,12,0	1/1:2,24:26:51.17:705,51,0	0/0:10,1:11:18.58:0,19,156	1/1:0,9:9:18.06:249,18,0	0/0:16,0:16:41.96:0,42,376	0/0:4,0:4:9:0,9,79	0/0:12,0:12:26.55:0,27,195	0/0:7,0:7:20.64:0,21,146	0/0:7,0:8:18.06:0,18,128	0/0:7,0:7:18:0,18,160	0/0:12,0:12:36.02:0,36,330	0/0:27,0:26:66.06:0,66,825	0/0:9,0:9:6.01:0,6,57	0/0:10,0:10:12.18:0,12,85	0/1:15,0:15:21.13:21,0,52	0/0:17,0:17:3.05:0,3,84	0/0:1,0:1:3:0,3,25	0/0:15,0:15:11.10:0,11,69	0/0:8,0:8:17.54:0,18,114	0/0:9,0:9:23.97:0,24,201	0/0:5,0:5:9:0,9,79	0/0:18,0:18:13.25:0,13,156	1/1:4,0:4:2.66:6,3,0
chr10	43287455	.	AG	A	1421.48	PASS	AB=0.607;AC=18;AF=0.321;AN=56;BaseQRankSum=-2.509;DP=323;FS=4.554;HRun=10;HaplotypeScore=55.8163;InbreedingCoeff=0.6577;MQ=79.60;MQ0=0;MQRankSum=-0.304;QD=11.46;ReadPosRankSum=2.887;VQSLOD=2.9470;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:18:16.35:0,16,93	1/1:4,0:4:8.73:49,9,0	0/0:4,0:4:0:0,0,0	0/0:15,0:15:2.32:0,2,203	0/0:15,0:15:33.09:0,33,365	1/1:7,0:7:11.58:64,12,0	1/1:28,0:28:27.91:244,28,0	0/1:5,5:11:13.16:116,0,13	1/1:10,0:10:17.41:98,17,0	0/0:12,0:16:14.40:0,14,77	0/0:3,0:6:2.86:0,3,14	0/0:10,0:12:14.46:0,14,92	0/0:7,0:8:8.16:0,8,46	0/0:6,0:9:20.78:0,21,120	0/0:4,0:9:8.52:0,9,43	0/0:3,0:12:25.57:0,26,128	0/0:28,0:27:57.04:0,57,571	0/0:1,0:10:8.64:0,9,47	1/1:3,6:9:17.99:156,18,0	1/1:3,12:15:32.98:286,33,0	0/1:4,13:17:0.19:227,0,0	0/0:2,0:2:0:0,0,0	0/0:2,0:15:8.09:0,8,59	0/0:5,0:8:5.60:0,6,26	0/0:7,0:9:2.84:0,3,14	0/0:3,0:3:2.88:0,3,15	1/1:9,10:19:29.97:260,30,0	1/1:0,4:4:12:104,12,0
chr10	43287512	.	A	ATT	2988.59	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-5.241;DP=412;FS=9.577;HRun=1;HaplotypeScore=63.5000;InbreedingCoeff=0.9153;MQ=85.34;MQ0=0;MQRankSum=-3.979;QD=44.61;ReadPosRankSum=1.239;VQSLOD=2.8009;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:63.21:0,63,963	0/0:4,0:4:9.03:0,9,138	0/0:22,0:18:9.27:0,9,568	0/0:32,0:25:60.54:0,61,879	0/0:10,0:10:27.08:0,27,392	0/0:9,0:9:27.09:0,27,411	0/0:29,0:29:84.29:0,84,1286	0/0:20,0:20:54.17:0,54,806	0/0:12,0:12:36.12:0,36,550	0/0:8,0:8:21.07:0,21,321	0/0:3,0:3:9.03:0,9,138	1/1:0,10:10:27.09:520,27,0	1/1:3,9:12:36.05:621,36,0	1/1:2,11:13:30.10:562,30,0	0/0:19,0:19:48.16:0,48,733	0/0:13,0:13:39.13:0,39,597	0/0:26,0:26:75.25:0,75,1148	0/0:9,0:9:24.08:0,24,367	0/0:16,0:16:45.14:0,45,668	0/0:13,0:13:36.11:0,36,529	0/0:29,0:29:75.25:0,75,1145	1/1:2,6:8:15.05:289,15,0	1/1:0,3:3:9.03:173,9,0	1/1:1,20:21:54.14:1005,54,0	0/0:16,0:16:42.14:0,42,642	0/0:11,0:11:27.09:0,27,412	0/0:20,0:20:57.19:0,57,872	0/0:1,0:1:3.01:0,3,46
chr10	43287833	.	T	TCAGAATGCTAGTCA	19229.98	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-3.959;DP=655;FS=7.996;HRun=0;HaplotypeScore=239.2870;InbreedingCoeff=0.9875;MQ=81.93;MQ0=0;MQRankSum=-15.668;QD=121.71;ReadPosRankSum=2.702;VQSLOD=3.6935;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,117,4368	0/0:11,0:11:30.10:0,30,1109	0/0:28,0:28:68.12:0,68,2241	0/0:17,0:17:48.13:0,48,1380	0/0:19,0:19:57.18:0,57,2106	0/0:27,0:27:78.27:0,78,2960	0/0:37,0:37:99:0,102,3993	0/0:34,0:34:87.28:0,87,3106	0/0:26,0:26:72.23:0,72,2757	0/0:17,0:17:48.16:0,48,1772	0/0:10,0:10:24.08:0,24,963	1/1:21,16:42:86.46:5551,86,0	1/1:7,7:18:36.09:2271,36,0	1/1:8,11:24:60.64:3689,61,0	0/0:22,0:22:63.22:0,63,2524	0/0:25,0:25:63.22:0,63,2285	0/0:24,0:24:69.24:0,69,2592	0/0:24,0:24:66.23:0,66,2501	0/0:26,0:26:78.27:0,78,3039	0/0:12,0:12:30.10:0,30,1223	0/0:38,0:38:99:0,102,3974	1/1:9,15:25:57.15:3570,57,0	1/1:11,6:22:35.99:1743,36,0	1/1:16,9:27:36.12:2406,36,0	0/0:21,0:21:63.19:0,63,2540	0/0:23,0:23:63.20:0,63,2202	0/0:14,0:14:39.13:0,39,1635	0/0:3,0:3:9.01:0,9,275
chr10	43290687	.	C	CGGT	1594.01	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=10.095;DP=660;FS=2.161;HRun=0;HaplotypeScore=232.3746;InbreedingCoeff=0.9975;MQ=65.90;MQ0=0;MQRankSum=-9.204;QD=38.88;ReadPosRankSum=1.455;VQSLOD=3.9639;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,150,2709	1/1:1,6:7:21.06:288,21,0	0/0:26,0:26:75.16:0,75,1169	0/0:25,0:25:66.23:0,66,1181	0/0:32,0:32:75.26:0,75,1386	1/1:0,7:7:21.07:318,21,0	1/1:0,14:14:39.13:583,39,0	0/0:26,0:26:72.24:0,72,1314	1/1:1,12:13:39.12:565,39,0	0/0:29,0:29:84.29:0,84,1556	0/0:31,0:31:84.29:0,84,1558	0/0:26,0:26:78.25:0,78,1423	0/0:23,0:23:69.24:0,69,1278	0/0:17,0:17:51.17:0,51,951	0/0:32,0:32:96.30:0,96,1719	0/0:24,0:23:69.22:0,69,1255	0/0:30,0:30:87.28:0,87,1591	0/0:30,0:30:90.28:0,90,1644	0/0:12,0:12:36.12:0,36,650	0/0:26,0:26:66.23:0,66,1221	0/0:23,0:23:57.20:0,57,1062	0/0:30,0:30:87.30:0,87,1622	0/0:20,0:20:57.20:0,57,1063	0/0:21,0:21:63.22:0,63,1175	0/0:24,0:24:69.23:0,69,1256	0/0:27,0:27:81.28:0,81,1505	0/0:23,0:23:60.21:0,60,1106	0/0:11,0:11:30.10:0,30,559
chr10	43290688	.	A	AT	390.20	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=10.462;DP=660;FS=1.375;HRun=0;HaplotypeScore=211.5643;InbreedingCoeff=0.9963;MQ=67.21;MQ0=0;MQRankSum=-9.540;QD=9.75;ReadPosRankSum=1.880;VQSLOD=3.7188;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,147,2054	1/1:1,6:7:18.60:88,19,0	0/0:28,0:28:74.87:0,75,891	0/0:25,0:25:68.88:0,69,881	0/0:32,0:32:75.25:0,75,1048	1/1:0,7:7:20.13:105,20,0	1/1:0,14:14:36.21:178,36,0	0/0:25,0:25:69.23:0,69,964	1/1:0,12:12:34.34:179,34,0	0/0:29,0:29:87.24:0,87,1179	0/0:31,0:31:81.74:0,82,1134	0/0:25,0:25:75.25:0,75,1049	0/0:23,0:23:69.21:0,69,944	0/0:17,0:17:51.17:0,51,713	0/0:30,0:30:90.29:0,90,1241	0/0:24,0:23:69.23:0,69,963	0/0:30,0:30:87.29:0,87,1215	0/0:31,0:31:90.30:0,90,1256	0/0:12,0:12:36.10:0,36,484	0/0:28,0:28:66.20:0,66,904	0/0:23,0:23:54.18:0,54,755	0/0:30,0:30:87.29:0,87,1217	0/0:20,0:20:60.19:0,60,822	0/0:22,0:22:63.21:0,63,881	0/0:23,0:23:66.22:0,66,922	0/0:27,0:27:81.27:0,81,1132	0/0:23,0:23:63.16:0,63,841	0/0:12,0:12:30.10:0,30,419
chr10	43290691	.	G	GAT	1522.16	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=10.139;DP=654;FS=2.156;HRun=0;HaplotypeScore=221.3257;InbreedingCoeff=0.9975;MQ=67.36;MQ0=0;MQRankSum=-9.137;QD=38.05;ReadPosRankSum=1.540;VQSLOD=3.5983;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,147,2318	1/1:1,6:7:21.06:282,21,0	0/0:24,0:24:57.06:0,57,932	0/0:23,0:23:63.19:0,63,978	0/0:32,0:32:75.20:0,75,1190	1/1:0,7:7:21.07:300,21,0	1/1:0,14:14:39.13:567,39,0	0/0:26,0:26:72.19:0,72,1120	1/1:0,12:12:36.12:533,36,0	0/0:28,0:28:84.28:0,84,1332	0/0:32,0:32:85.13:0,85,1341	0/0:25,0:25:75.26:0,75,1220	0/0:22,0:22:66.23:0,66,1073	0/0:16,0:16:48.16:0,48,783	0/0:29,0:29:87.29:0,87,1377	0/0:25,0:24:75.20:0,75,1138	0/0:32,0:32:96.30:0,96,1508	0/0:33,0:33:96.27:0,96,1466	0/0:11,0:11:33.11:0,33,528	0/0:25,0:25:57.19:0,57,927	0/0:23,0:23:57.12:0,57,900	0/0:31,0:31:87.30:0,87,1412	0/0:20,0:20:60.20:0,60,974	0/0:23,0:23:66.22:0,66,1062	0/0:23,0:23:66.23:0,66,1074	0/0:27,0:27:81.28:0,81,1295	0/0:21,0:21:57.16:0,57,849	0/0:12,0:12:30.09:0,30,466
chr10	43293770	.	ACATGAAGC	A	6218.73	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=13.822;DP=710;FS=3.218;HRun=0;HaplotypeScore=187.9182;InbreedingCoeff=0.9924;MQ=93.02;MQ0=0;MQRankSum=-14.140;QD=63.46;ReadPosRankSum=-0.481;VQSLOD=4.8132;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,120,4867	1/1:1,6:7:15.02:360,15,0	0/0:31,0:31:90.29:0,90,3536	0/0:34,0:34:91.86:0,92,3338	1/1:2,12:14:30.02:647,30,0	1/1:0,27:27:72.16:1841,72,0	1/1:1,22:23:57.07:1418,57,0	0/0:34,0:34:99:0,102,4436	1/1:3,24:27:69.24:1952,69,0	0/0:25,0:25:69.23:0,69,2866	0/0:7,0:7:18.06:0,18,616	0/0:31,0:31:93.32:0,93,3979	0/0:30,0:30:90.31:0,90,3958	0/0:24,0:24:69.24:0,69,2939	0/0:33,0:33:96.33:0,96,4109	0/0:21,0:21:60.21:0,60,2567	0/0:31,0:31:87.28:0,87,3458	0/0:20,0:20:54.19:0,54,2277	0/0:20,0:20:60.19:0,60,2423	0/0:22,0:22:60.21:0,60,2500	0/0:48,0:47:99:0,138,5872	0/0:22,0:21:54.19:0,54,2279	0/0:16,0:16:45.15:0,45,1951	0/0:32,0:32:96.33:0,96,4145	0/0:16,0:16:48.16:0,48,2073	0/0:32,0:32:90.31:0,90,3765	0/0:34,0:34:99:0,102,4383	0/0:6,0:6:18.06:0,18,797
chr10	43294042	.	G	GCACA	2687.69	PASS	AB=0.845;AC=33;AF=0.660;AN=50;BaseQRankSum=-3.192;DP=563;FS=3.811;HRun=0;HaplotypeScore=115.0899;InbreedingCoeff=0.3425;MQ=67.73;MQ0=9;MQRankSum=0.444;QD=6.64;ReadPosRankSum=-0.962;VQSLOD=2.4445;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:36,0:36:11.61:104,12,0	0/1:8,0:8:0:0,0,0	./.	./.	1/1:19,0:18:2.99:24,3,0	1/1:20,0:20:23.88:303,24,0	0/1:16,0:24:6.44:6,0,40	./.	1/1:14,7:23:3.01:70,3,0	1/1:28,0:28:24.52:370,25,0	0/1:7,0:11:0.43:0,0,3	1/1:19,0:19:9.01:136,9,0	1/1:20,0:20:24.03:358,24,0	0/1:13,0:14:6.92:199,0,7	0/1:9,6:17:21.92:64,0,22	0/1:8,4:12:36.97:78,0,37	0/0:11,0:16:18.01:0,18,182	1/1:24,0:23:20.08:236,20,0	0/0:13,0:13:3:0,3,28	0/1:16,0:16:0:0,0,0	0/0:24,0:29:6.01:0,6,56	1/1:24,0:23:15.03:261,15,0	1/1:19,0:19:9.01:153,9,0	1/1:25,0:24:3.01:47,3,0	1/1:21,0:21:6:114,6,0	1/1:23,0:23:20.34:311,20,0	0/0:8,0:8:3:0,3,28	0/0:6,0:6:3.47:0,3,29
chr10	43294769	.	C	CT	303.59	PASS	AB=0.963;AC=4;AF=0.071;AN=56;BaseQRankSum=-2.231;DP=444;FS=0.000;HRun=13;HaplotypeScore=64.5701;InbreedingCoeff=0.3709;MQ=63.96;MQ0=4;MQRankSum=1.227;QD=3.99;ReadPosRankSum=-0.120;VQSLOD=0.5059;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,29:38:32.81:394,33,0	0/0:9,0:9:8.89:0,9,62	0/0:8,0:8:5.59:0,6,31	0/0:5,0:5:4.92:0,5,22	0/0:29,0:29:47.22:0,47,326	0/0:13,0:12:23.75:0,24,164	0/0:14,1:15:4.40:0,4,164	0/1:23,2:24:12.32:12,0,197	0/0:15,0:13:23.66:0,24,160	0/0:19,0:20:31.56:0,32,207	0/0:14,0:14:11.80:0,12,81	0/0:15,0:13:23.79:0,24,164	0/0:12,0:13:25.80:0,26,170	0/0:14,0:14:23.78:0,24,164	0/0:16,0:16:29.67:0,30,205	0/0:10,0:10:17.80:0,18,123	0/0:19,0:20:43.57:0,44,288	0/0:12,0:11:26.78:0,27,185	0/0:12,0:11:14.79:0,15,103	0/0:21,1:22:16.71:0,17,259	0/1:13,0:12:0.11:0,0,117	0/0:4,0:4:8.92:0,9,61	0/0:13,0:13:14.80:0,15,103	0/0:11,0:13:12.02:0,12,59	0/0:18,0:18:38.57:0,39,263	0/0:25,0:25:47.02:0,47,324	0/0:16,0:17:34.65:0,35,232	0/0:12,2:14:10.72:0,11,212
chr10	43295221	.	AG	A	9259.32	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=20.198;DP=713;FS=0.588;HRun=2;HaplotypeScore=101.8464;InbreedingCoeff=0.9988;MQ=85.88;MQ0=0;MQRankSum=-2.515;QD=33.55;ReadPosRankSum=3.863;VQSLOD=4.7686;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,126,1885	1/1:0,7:7:21.07:260,21,0	0/0:25,0:25:68.04:0,68,1041	0/0:21,0:21:57.18:0,57,826	1/1:1,37:38:99:1264,102,0	1/1:0,20:20:60.19:744,60,0	1/1:0,21:21:57.18:707,57,0	0/0:26,0:26:72.24:0,72,1061	1/1:0,24:24:66.21:818,66,0	0/0:24,0:24:69.23:0,69,1013	0/0:17,0:17:51.17:0,51,764	1/1:0,33:33:99:1227,99,0	1/1:2,29:31:84.26:1041,84,0	1/1:1,24:25:69.22:855,69,0	0/0:24,0:24:69.23:0,69,1033	0/0:14,0:14:42.13:0,42,611	0/0:35,0:35:99:0,102,1525	0/0:36,0:36:99:0,105,1574	0/0:24,0:24:72.19:0,72,1003	0/0:30,0:30:87.27:0,87,1264	0/0:45,0:45:99:0,126,1868	1/1:1,21:22:54.17:669,54,0	1/1:1,25:26:54.17:669,54,0	1/1:0,29:29:81.25:1004,81,0	0/0:10,0:10:30.10:0,30,450	0/0:34,0:34:99:0,102,1526	0/0:21,0:21:63.20:0,63,921	0/0:7,0:7:21.07:0,21,315
chr10	43295498	.	A	AT	8621.53	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=-16.112;DP=733;FS=15.845;HRun=7;HaplotypeScore=63.5290;InbreedingCoeff=0.9328;MQ=77.93;MQ0=0;MQRankSum=-1.297;QD=28.55;ReadPosRankSum=2.855;VQSLOD=3.9415;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,108,1037	1/1:2,13:15:36.11:435,36,0	0/0:18,0:18:42.04:0,42,394	0/1:13,0:13:9.61:10,0,172	1/1:4,39:43:99:1396,117,0	1/1:4,34:38:93.29:1124,93,0	1/1:3,17:20:39.12:471,39,0	0/0:33,0:33:75.07:0,75,715	1/1:5,27:32:72.22:870,72,0	0/0:31,0:31:87.12:0,87,835	0/0:33,0:33:78.12:0,78,753	1/1:3,28:31:81.21:962,81,0	1/1:0,25:25:69.21:834,69,0	1/1:3,20:23:51.14:605,51,0	0/0:25,0:25:75.12:0,75,724	0/0:22,0:22:54.08:0,54,522	0/0:23,0:23:60.08:0,60,573	0/0:20,0:20:51.06:0,51,486	0/0:22,0:22:54.07:0,54,517	0/0:36,0:36:99:0,99,942	0/0:35,0:35:99:0,102,985	1/1:0,21:21:57.17:688,57,0	1/1:6,17:23:54.16:648,54,0	1/1:2,16:18:48.15:580,48,0	0/0:20,0:20:54.09:0,54,522	0/0:29,0:29:78.11:0,78,749	0/0:34,0:34:93.12:0,93,886	0/0:8,0:8:21.03:0,21,203
chr10	43295931	.	A	AT	4078.11	PASS	AB=0.808;AC=26;AF=0.464;AN=56;BaseQRankSum=-1.309;DP=461;FS=1.326;HRun=12;HaplotypeScore=83.6693;InbreedingCoeff=0.8653;MQ=74.55;MQ0=2;MQRankSum=-4.269;QD=17.89;ReadPosRankSum=-1.734;VQSLOD=3.9408;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,1:31:36.39:0,36,430	0/1:3,5:8:0.89:150,0,1	0/0:26,0:18:10.82:0,11,88	0/1:14,0:7:0.50:1,0,23	1/1:8,11:20:35.75:306,36,0	1/1:8,14:22:48.07:461,48,0	1/1:2,10:11:30.05:291,30,0	1/1:18,14:32:54.07:518,54,0	1/1:3,7:10:21.04:208,21,0	0/0:16,0:16:37.81:0,38,268	0/0:20,0:21:55.70:0,56,399	0/0:5,0:14:18.09:0,18,52	0/0:6,0:19:35.07:0,35,120	0/0:1,0:8:5.02:0,5,20	1/1:1,13:14:39.06:379,39,0	1/1:3,9:13:29.88:277,30,0	0/0:25,0:25:62.54:0,63,452	0/0:9,0:9:23.82:0,24,172	1/1:8,8:16:35.41:320,35,0	1/1:11,13:24:41.99:388,42,0	1/1:2,6:7:18.03:175,18,0	0/0:2,0:5:8.15:0,8,24	0/0:0,0:5:3.90:0,4,18	0/0:4,0:12:16.75:0,17,48	0/0:19,0:20:31.80:0,32,225	0/0:21,0:21:56.66:0,57,416	1/1:6,13:19:43.28:401,43,0	1/1:12,4:16:23.94:203,24,0
chr10	43295947	.	A	ATT	5988.30	PASS	AB=0.538;AC=49;AF=0.875;AN=56;BaseQRankSum=1.306;DP=445;FS=4.894;HRun=8;HaplotypeScore=88.0217;InbreedingCoeff=0.7642;MQ=63.78;MQ0=5;MQRankSum=-0.426;QD=15.43;ReadPosRankSum=0.281;VQSLOD=2.6162;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,0:34:73.61:251,74,0	1/1:2,3:5:12.04:188,12,0	0/0:22,0:12:14.93:0,15,153	0/0:14,0:6:1.01:0,1,90	1/1:8,10:18:27.05:369,27,0	1/1:9,11:20:39.13:597,39,0	1/1:3,11:13:33.11:523,33,0	1/1:7,0:27:51.47:185,51,0	1/1:4,8:12:21.07:330,21,0	1/1:4,0:15:27.92:96,28,0	1/1:3,0:23:44.64:176,45,0	1/1:2,9:11:24.07:358,24,0	1/1:6,13:19:36.12:562,36,0	1/1:1,6:7:18.06:285,18,0	1/1:4,0:17:32.67:155,33,0	1/1:4,0:13:18.94:67,19,0	0/0:21,0:21:57.15:0,57,632	1/1:0,0:11:24.95:86,25,0	1/1:4,0:15:29.99:119,30,0	1/1:4,0:17:34.68:208,35,0	1/1:2,0:9:17.73:69,18,0	1/1:2,3:5:9.03:143,9,0	1/1:1,5:6:15.05:236,15,0	1/1:1,13:13:27.09:428,27,0	1/1:5,0:18:25.46:104,25,0	1/1:4,0:21:43.22:167,43,0	1/1:4,0:22:41.20:185,41,0	0/1:2,0:14:1.58:102,0,2
chr10	43297059	.	A	AAC	14146.95	PASS	AB=0.736;AC=37;AF=0.661;AN=56;BaseQRankSum=-6.413;DP=833;FS=3.945;HRun=0;HaplotypeScore=187.2698;InbreedingCoeff=0.7545;MQ=52.30;MQ0=20;MQRankSum=2.797;QD=22.74;ReadPosRankSum=-1.473;VQSLOD=4.5496;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:32:7.95:133,0,8	0/0:9,0:9:20.20:0,20,128	0/0:43,0:19:9.02:0,9,109	0/0:33,0:11:8.89:0,9,85	0/0:26,0:26:32.60:0,33,256	0/0:25,0:25:54.73:0,55,406	0/0:20,0:20:33.66:0,34,226	1/1:33,5:38:35.72:864,36,0	0/0:23,0:23:47.42:0,47,342	1/1:10,10:20:45.12:664,45,0	1/1:9,14:23:51.17:799,51,0	1/1:19,2:35:65.17:648,65,0	1/1:18,1:25:33.49:266,33,0	1/1:23,0:30:50.22:392,50,0	1/1:29,19:48:45.48:1467,45,0	1/1:15,14:30:65.51:1024,66,0	0/0:32,0:31:78.12:0,78,895	0/1:14,11:25:24.71:699,0,25	1/1:19,6:21:33.54:446,34,0	1/1:14,16:29:75.24:1151,75,0	0/1:39,19:58:0.58:1239,0,1	1/1:17,0:27:12.75:259,13,0	1/1:13,0:23:47.75:341,48,0	1/1:23,2:45:74.75:643,75,0	1/1:14,15:29:2.52:966,3,0	1/1:14,13:27:63.20:964,63,0	1/1:20,17:37:29.74:922,30,0	1/1:7,1:8:20.92:259,21,0
chr10	43297071	.	CACACAA	C	4828	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-6.954;DP=826;FS=0.000;HRun=0;HaplotypeScore=282.2240;InbreedingCoeff=0.9259;MQ=48.15;MQ0=26;MQRankSum=-3.845;QD=43.89;ReadPosRankSum=-0.562;VQSLOD=4.1257;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:27:47.18:0,47,471	1/1:6,4:10:21.07:428,21,0	0/0:44,0:6:5.60:0,6,130	0/0:40,0:6:12.04:0,12,215	1/1:14,13:27:58.89:1030,59,0	1/1:13,14:27:62.36:1185,62,0	1/1:13,6:19:51.16:984,51,0	0/0:35,0:35:80.87:0,81,871	1/1:13,14:27:71.48:1202,71,0	0/0:25,0:25:66.58:0,67,1087	0/0:25,0:25:59.74:0,60,1210	0/0:32,0:32:66.19:0,66,1278	0/0:20,0:19:39.17:0,39,530	0/0:28,0:28:45.19:0,45,711	0/0:45,0:45:99:0,108,2193	0/0:27,0:27:71.89:0,72,1438	0/0:32,0:31:72.19:0,72,1937	0/0:25,0:25:57.38:0,57,1178	0/0:26,0:20:45.01:0,45,654	0/0:28,0:27:67.07:0,67,1413	0/0:60,0:58:99:0,115,1968	0/0:25,0:25:52.69:0,53,884	0/0:24,0:23:46.83:0,47,957	0/0:46,0:45:74.48:0,74,1494	0/0:31,0:31:82.11:0,82,1581	0/0:27,0:27:69.16:0,69,1343	0/0:36,0:36:92.91:0,93,1490	0/0:7,0:7:2.59:0,3,229
chr10	43297073	.	CACAA	C	2722.48	PASS	AB=0.993;AC=19;AF=0.339;AN=56;BaseQRankSum=-4.978;DP=828;FS=2.821;HRun=0;HaplotypeScore=261.1485;InbreedingCoeff=-0.2096;MQ=49.14;MQ0=25;MQRankSum=-1.016;QD=5.59;ReadPosRankSum=-5.034;VQSLOD=1.8581;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:27:21.62:0,22,432	0/1:10,0:10:12.34:172,0,12	0/0:42,0:6:12.02:0,12,184	0/0:39,0:7:8.64:0,9,209	1/1:27,1:28:10.37:427,10,0	0/1:25,1:26:17.36:436,0,17	1/1:19,0:19:50.57:437,51,0	0/1:34,0:34:99:223,0,557	0/1:25,2:27:28.35:544,0,28	0/0:25,0:25:12.82:0,13,669	0/0:25,0:25:62.68:0,63,814	0/0:31,0:31:16.89:0,17,997	0/0:20,0:19:2.74:0,3,398	0/1:28,0:28:6.66:7,0,603	0/1:47,0:47:99:114,0,1603	0/1:28,0:28:53.60:54,0,952	0/0:33,0:32:87.16:0,87,1908	0/1:25,0:25:58.66:59,0,763	0/1:26,0:20:29.49:29,0,429	0/1:28,0:27:99:109,0,854	0/1:60,0:58:99:136,0,1295	0/0:27,0:27:66.20:0,66,740	0/0:24,0:23:59.97:0,60,759	0/0:46,0:45:79.21:0,79,1237	0/1:32,0:32:30.35:30,0,1044	0/1:26,0:26:33.57:34,0,714	0/1:36,0:36:7.73:8,0,925	0/1:7,0:7:73.41:73,0,187
chr10	43297105	.	AAC	A	9372.88	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-8.416;DP=823;FS=0.000;HRun=0;HaplotypeScore=201.8069;InbreedingCoeff=0.9915;MQ=52.14;MQ0=35;MQRankSum=0.113;QD=22.69;ReadPosRankSum=0.601;VQSLOD=5.0138;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,11:19:35.51:350,36,0	0/0:12,0:12:27.09:0,27,440	0/0:50,0:7:14.78:0,15,176	0/0:45,0:9:15.50:0,16,170	0/0:26,0:26:57.18:0,57,899	0/0:26,0:26:60.67:0,61,943	0/0:22,0:22:51.17:0,51,825	1/1:13,24:37:44.35:788,44,0	0/0:25,0:25:54.18:0,54,868	1/1:5,27:33:87.04:1022,87,0	1/1:3,20:23:53.99:592,54,0	0/0:8,0:32:51.87:0,52,452	0/0:6,0:20:29.74:0,30,330	0/0:3,0:27:53.37:0,53,453	1/1:5,38:43:99:1190,99,0	1/1:8,23:31:60.16:733,60,0	0/0:36,0:35:53:0,53,1099	1/1:8,15:23:19.46:314,19,0	1/1:9,16:22:47.96:543,48,0	1/1:7,16:23:41.85:451,42,0	1/1:18,40:56:63.09:1064,63,0	0/0:8,0:26:34.37:0,34,315	0/0:6,0:22:39.89:0,40,384	0/0:11,0:36:45.45:0,45,537	1/1:7,28:35:60.12:733,60,0	1/1:6,16:22:51.15:626,51,0	1/1:4,27:33:68.86:815,69,0	1/1:2,4:6:13.40:153,13,0
chr10	43297131	.	AAC	A	360.33	PASS	AB=0.935;AC=3;AF=0.054;AN=56;BaseQRankSum=0.516;DP=790;FS=5.699;HRun=0;HaplotypeScore=192.8101;InbreedingCoeff=0.5654;MQ=56.67;MQ0=24;MQRankSum=-2.246;QD=7.67;ReadPosRankSum=-1.317;VQSLOD=2.5422;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,14:18:38.75:450,39,0	0/0:12,0:12:27.04:0,27,261	0/0:43,0:11:20.96:0,21,260	0/0:28,0:4:5.99:0,6,50	0/0:26,0:26:58.44:0,58,528	0/0:26,0:26:39.59:0,40,453	0/0:23,0:23:48.08:0,48,462	0/0:35,1:36:13:0,13,1031	0/0:22,0:22:48.07:0,48,458	0/0:31,0:31:75.24:0,75,1195	0/0:17,1:18:7.62:0,8,651	0/0:29,0:29:54.17:0,54,837	0/0:28,0:27:57.19:0,57,924	0/0:35,1:36:37.68:0,38,1065	0/0:48,0:48:99:0,108,1703	0/1:27,2:29:15.02:15,0,826	0/0:28,2:29:34.72:0,35,1099	0/0:17,0:17:25.58:0,26,370	0/0:26,0:26:60.20:0,60,974	0/0:19,0:19:45.15:0,45,742	0/0:56,0:54:99:0,113,1703	0/0:27,1:27:31.73:0,32,980	0/0:23,0:21:51.17:0,51,826	0/0:34,0:34:66.19:0,66,1053	0/0:32,0:32:57.18:0,57,913	0/0:22,0:22:66.21:0,66,1062	0/0:34,0:34:75.26:0,75,1220	0/0:15,0:15:40.05:0,40,616
chr10	43297145	.	C	CAG	3966.43	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-6.823;DP=760;FS=1.520;HRun=0;HaplotypeScore=162.4359;InbreedingCoeff=0.9735;MQ=61.87;MQ0=8;MQRankSum=0.117;QD=35.41;ReadPosRankSum=4.285;VQSLOD=4.7477;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:35.51:0,36,262	1/1:1,9:10:27.09:491,27,0	0/0:23,0:12:22.16:0,22,272	0/0:14,0:3:5.95:0,6,61	1/1:4,25:29:56.81:1032,57,0	1/1:6,20:26:22.66:743,23,0	1/1:1,23:24:48.16:878,48,0	0/0:38,0:38:93.15:0,93,1123	1/1:4,19:23:45.15:823,45,0	0/0:31,0:31:78.20:0,78,1033	0/0:20,0:20:57.05:0,57,694	0/0:26,0:26:54.15:0,54,723	0/0:27,0:26:63.13:0,63,854	0/0:34,0:34:72.18:0,72,970	0/0:47,0:47:99:0,117,1528	0/0:31,0:31:78.11:0,78,963	0/0:27,0:27:81.17:0,81,1074	0/0:16,0:16:23.09:0,23,323	0/0:26,0:26:75.21:0,75,992	0/0:21,0:21:56.50:0,57,708	0/0:56,0:55:99:0,107,1478	0/0:27,0:26:63.12:0,63,840	0/0:23,0:22:54.12:0,54,705	0/0:35,0:35:72.18:0,72,954	0/0:32,0:32:60.17:0,60,805	0/0:26,0:26:75.20:0,75,976	0/0:32,0:32:84:0,84,1106	0/0:17,0:17:38.50:0,38,552
chr10	43297688	.	TC	T	10262.92	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=14.654;DP=796;FS=0.000;HRun=3;HaplotypeScore=77.6158;InbreedingCoeff=0.9994;MQ=90.80;MQ0=0;MQRankSum=-3.228;QD=34.91;ReadPosRankSum=4.998;VQSLOD=5.1197;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,144,2034	1/1:0,12:12:36.11:446,36,0	0/0:33,0:33:96.22:0,96,1273	0/0:30,0:30:81.25:0,81,1115	1/1:0,25:25:72.23:893,72,0	1/1:0,26:26:71.88:873,72,0	1/1:2,26:28:78.24:967,78,0	0/0:33,0:33:96.32:0,96,1367	1/1:0,34:34:96.30:1190,96,0	0/0:39,0:39:99:0,108,1556	0/0:22,0:22:63.21:0,63,906	1/1:0,33:33:90.28:1116,90,0	1/1:0,28:28:75.24:930,75,0	1/1:1,31:32:90.28:1116,90,0	0/0:27,0:27:81.25:0,81,1132	0/0:27,0:27:81.26:0,81,1148	0/0:33,0:33:93.31:0,93,1338	0/0:26,0:26:75.25:0,75,1079	0/0:22,0:22:54.17:0,54,761	0/0:24,0:24:72.24:0,72,1036	0/0:44,0:44:99:0,129,1857	1/1:0,33:33:96.23:1171,96,0	1/1:0,24:24:72.23:892,72,0	1/1:0,19:19:54.17:669,54,0	0/0:29,0:29:84.28:0,84,1205	0/0:21,0:21:63.16:0,63,868	0/0:34,0:34:96.31:0,96,1357	0/0:7,0:7:21.07:0,21,297
chr10	43298581	.	A	AATAAAAAAAAAATC	15049.42	PASS	AB=1.000;AC=47;AF=0.870;AN=54;BaseQRankSum=-2.132;DP=364;FS=24.100;HRun=0;HaplotypeScore=120.6741;InbreedingCoeff=0.3177;MQ=47.93;MQ0=27;MQRankSum=-4.098;QD=46.59;ReadPosRankSum=3.581;VQSLOD=2.5833;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:17:49.24:268,0,49	1/1:5,0:5:5.72:30,6,0	0/1:22,0:7:5.18:5,0,113	0/0:19,0:6:11.61:0,12,125	1/1:18,0:15:5.12:690,5,0	1/1:14,0:12:1.53:359,2,0	./.	1/1:29,0:28:64.65:1933,65,0	0/1:8,0:8:1.67:70,0,2	1/1:10,3:14:30.72:1097,31,0	1/1:9,1:12:33.11:1205,33,0	1/1:9,0:8:4.34:280,4,0	1/1:9,0:8:17.98:283,18,0	1/1:7,0:8:18.05:503,18,0	1/1:10,0:9:23.71:774,24,0	1/1:4,7:15:11.73:540,12,0	0/0:20,0:17:45.83:0,46,823	1/1:6,1:7:18.06:816,18,0	1/1:4,5:16:1.46:1229,1,0	1/1:6,2:7:4.17:333,4,0	1/1:3,0:2:3.01:39,3,0	1/1:2,0:2:6.02:128,6,0	1/1:7,0:6:8.96:294,9,0	1/1:4,0:3:2.86:73,3,0	1/1:3,10:16:17.10:902,17,0	1/1:6,11:21:45.61:1407,46,0	1/1:17,0:15:41.99:1258,42,0	1/1:5,7:13:9.03:534,9,0
chr10	43298592	.	A	ATC	319.45	PASS	AB=0.910;AC=7;AF=0.125;AN=56;BaseQRankSum=2.609;DP=349;FS=13.979;HRun=0;HaplotypeScore=78.7291;InbreedingCoeff=-0.1752;MQ=55.19;MQ0=8;MQRankSum=-3.305;QD=2.90;ReadPosRankSum=2.125;VQSLOD=0.6983;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:16,6:18:99:170,0,167	0/0:4,0:4:3:0,3,25	0/0:25,0:10:12.61:0,13,198	0/0:25,0:11:16.14:0,16,215	0/1:20,0:17:78.22:78,0,207	0/0:12,0:11:22.62:0,23,270	0/0:4,0:4:9.03:0,9,123	0/1:29,0:29:69.09:69,0,584	0/0:8,0:8:13.26:0,13,142	0/0:17,0:17:47.48:0,47,529	0/0:20,0:19:13.03:0,13,461	0/0:7,1:8:18.05:0,18,222	0/0:8,0:7:15.03:0,15,163	0/1:10,1:10:23.55:24,0,170	0/1:9,0:9:8.53:9,0,118	0/0:11,0:11:22.22:0,22,223	0/0:20,0:19:54.11:0,54,724	0/0:10,0:10:26.54:0,27,264	0/0:12,0:11:28.14:0,28,290	0/0:7,0:7:14.61:0,15,106	0/0:2,0:2:3.01:0,3,32	0/1:1,1:2:24.82:40,0,25	0/0:6,0:5:10.27:0,10,112	0/0:6,0:5:3.01:0,3,43	0/0:12,0:12:24.90:0,25,225	0/0:16,0:15:37.97:0,38,409	0/1:17,0:16:56.98:57,0,267	0/0:6,0:6:11.36:0,11,77
chr10	43298593	.	A	ATC	372.21	PASS	AB=0.891;AC=7;AF=0.125;AN=56;BaseQRankSum=2.798;DP=337;FS=5.740;HRun=0;HaplotypeScore=78.9670;InbreedingCoeff=-0.1725;MQ=56.16;MQ0=7;MQRankSum=-4.304;QD=3.32;ReadPosRankSum=2.053;VQSLOD=1.4010;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:18,1:16:42.36:42,0,186	0/0:3,0:3:5.99:0,6,63	0/0:26,0:11:9.32:0,9,202	0/0:25,0:11:1.06:0,1,180	0/1:13,7:17:99:158,0,240	0/0:11,0:10:24.05:0,24,286	0/0:4,0:4:9.03:0,9,122	0/1:22,5:27:99:116,0,552	0/0:9,0:9:20.97:0,21,204	0/0:17,0:17:46.46:0,46,513	0/1:19,0:18:11.77:12,0,458	0/0:7,0:7:18.05:0,18,223	0/0:7,0:6:15.04:0,15,167	0/0:9,0:9:18.29:0,18,229	0/1:8,1:9:25.62:26,0,121	0/0:11,0:11:19.92:0,20,208	0/0:20,0:19:53.36:0,53,711	0/0:10,0:10:26.03:0,26,272	0/0:13,0:12:30.92:0,31,293	0/0:7,0:7:13.52:0,14,91	0/0:2,0:2:3.01:0,3,31	0/1:2,0:2:0.47:0,0,25	0/0:6,0:5:15.01:0,15,155	0/0:6,0:5:3.01:0,3,43	0/0:12,0:12:22.04:0,22,199	0/0:15,0:15:32.65:0,33,374	0/1:12,4:15:99:139,0,272	0/0:5,0:5:9.08:0,9,81
chr10	43299225	.	GTC	G	646.44	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=6.528;DP=543;FS=7.241;HRun=0;HaplotypeScore=159.9508;InbreedingCoeff=0.7236;MQ=76.45;MQ0=13;MQRankSum=-3.756;QD=4.23;ReadPosRankSum=-0.777;VQSLOD=2.3045;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:15:0.47:0,0,2	1/1:1,11:12:18.06:227,18,0	0/0:69,0:35:29:0,29,681	0/1:83,0:39:12:12,0,660	0/0:15,0:15:42.13:0,42,680	1/1:2,13:13:12.04:154,12,0	1/1:6,17:21:12.02:139,12,0	0/0:15,0:15:27.09:0,27,440	1/1:2,18:19:21.07:269,21,0	0/0:18,0:18:54.18:0,54,878	0/0:7,0:7:2.99:0,3,26	0/0:15,0:15:24.08:0,24,371	0/0:14,0:14:21.07:0,21,314	0/0:11,0:11:12.04:0,12,187	0/0:22,0:22:24.07:0,24,351	0/0:16,0:15:33.11:0,33,509	0/0:29,0:29:66.23:0,66,1110	0/0:14,0:14:23.30:0,23,472	0/0:8,0:8:18.05:0,18,254	0/0:15,0:15:24.08:0,24,358	0/0:27,0:27:39.10:0,39,625	0/0:12,0:12:24.08:0,24,372	0/0:10,0:10:9.02:0,9,131	0/0:15,0:15:5.98:0,6,92	0/0:7,0:7:12.04:0,12,198	0/0:17,0:17:36.12:0,36,599	0/0:13,0:13:15.04:0,15,218	0/0:3,0:3:9.03:0,9,143
chr10	43299236	.	TGA	T	728.83	PASS	AB=1.000;AC=14;AF=0.250;AN=56;BaseQRankSum=2.949;DP=539;FS=14.987;HRun=0;HaplotypeScore=158.0530;InbreedingCoeff=0.6607;MQ=73.22;MQ0=22;MQRankSum=-3.335;QD=7.75;ReadPosRankSum=-2.241;VQSLOD=1.6960;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,9:12:6.02:72,6,0	1/1:12,0:12:20.98:245,21,0	0/0:97,0:37:67.30:0,67,1156	0/0:108,0:43:51.89:0,52,779	0/0:15,0:15:45.12:0,45,781	1/1:13,1:12:12.04:153,12,0	1/1:19,1:18:12.02:135,12,0	0/0:10,0:10:20.69:0,21,184	1/1:19,0:17:21.07:277,21,0	0/0:18,0:18:40.90:0,41,353	0/1:3,0:3:0:0,0,0	0/0:14,0:14:17.60:0,18,155	0/0:10,0:10:13.02:0,13,108	0/0:10,0:10:4.50:0,4,39	0/0:18,0:18:4.35:0,4,39	0/0:12,0:12:3:0,3,79	0/0:29,0:29:81.16:0,81,1483	0/0:11,0:11:12.57:0,13,210	0/1:5,0:5:0.83:1,0,23	0/0:11,0:11:6.16:0,6,89	0/0:24,0:24:31.78:0,32,311	0/0:9,0:9:4.52:0,5,63	1/1:9,0:9:1.41:3,1,0	0/0:14,0:14:0.39:0,0,1	0/0:7,0:7:11.21:0,11,88	0/0:12,0:12:26.37:0,26,298	0/0:12,0:12:5.99:0,6,82	0/0:3,0:3:6.90:0,7,71
chr10	43299237	.	GAC	G	1309.30	PASS	AB=0.938;AC=33;AF=0.589;AN=56;BaseQRankSum=1.387;DP=532;FS=6.327;HRun=0;HaplotypeScore=153.7981;InbreedingCoeff=-0.0610;MQ=74.12;MQ0=22;MQRankSum=-3.050;QD=4.64;ReadPosRankSum=-4.283;VQSLOD=1.1612;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:12,0:12:5.90:37,6,0	1/1:11,1:12:20.27:126,20,0	0/0:98,0:36:72.55:0,73,1140	0/0:109,0:44:30.86:0,31,840	0/0:13,0:13:39.12:0,39,749	1/1:14,0:12:11.87:80,12,0	1/1:19,0:17:8.72:50,9,0	0/1:8,0:8:17.72:43,0,18	1/1:18,1:17:20.87:158,21,0	0/1:18,0:18:51.71:83,0,52	0/1:3,0:3:0:0,0,0	0/1:9,5:14:32.50:34,0,32	0/1:6,4:10:25.14:32,0,25	0/1:6,4:10:9.53:55,0,10	0/1:18,0:18:8.04:99,0,8	1/1:12,0:12:6.91:181,7,0	0/0:29,0:29:81.24:0,81,1510	0/1:10,0:10:32.56:33,0,81	1/1:4,0:4:11.98:100,12,0	0/1:11,0:11:18.42:72,0,18	0/1:23,0:23:10.16:10,0,80	0/1:8,1:9:8.30:97,0,8	1/1:4,5:9:8.99:74,9,0	1/1:9,5:14:5.85:48,6,0	0/1:7,0:7:7.36:11,0,7	0/1:12,0:12:19.51:20,0,85	0/1:11,0:11:15.50:30,0,16	0/1:3,0:3:12.06:12,0,31
chr10	43299244	.	TCTGC	T	686.54	PASS	AB=0.899;AC=31;AF=0.574;AN=54;BaseQRankSum=5.511;DP=486;FS=15.001;HRun=0;HaplotypeScore=151.1190;InbreedingCoeff=0.2718;MQ=71.29;MQ0=25;MQRankSum=-2.685;QD=3.00;ReadPosRankSum=-1.278;VQSLOD=1.8599;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:11:5.98:49,6,0	0/1:13,1:14:6.88:123,0,7	0/0:96,0:31:33.78:0,34,1010	0/0:110,0:39:25.63:0,26,864	0/0:13,0:13:36.12:0,36,981	1/1:14,0:12:8.91:41,9,0	1/1:17,0:14:5.32:36,5,0	1/1:7,0:7:7.62:61,8,0	1/1:18,1:17:20.67:167,21,0	0/1:15,0:15:1.37:89,0,1	0/1:2,0:2:0:0,0,0	1/1:8,5:13:11.52:64,12,0	0/1:5,4:9:3.66:38,0,4	1/1:4,4:8:3:26,3,0	0/1:14,0:14:15.34:20,0,15	1/1:4,0:4:2.50:6,2,0	0/0:26,0:26:75.26:0,75,2009	0/1:9,0:9:6.70:7,0,32	./.	0/0:8,0:8:3.43:0,3,13	0/1:20,0:20:10.33:26,0,10	1/1:4,1:5:3.47:27,3,0	0/1:1,5:6:0:0,0,0	0/1:8,5:13:0.11:0,0,0	1/1:7,0:7:3.89:28,4,0	0/1:11,0:11:7.69:29,0,8	0/1:11,0:11:0.21:0,0,0	0/0:2,0:2:2.48:0,2,9
chr10	43299246	.	TGC	T	342.20	PASS	AB=1.000;AC=23;AF=0.426;AN=54;BaseQRankSum=5.914;DP=483;FS=12.258;HRun=0;HaplotypeScore=154.1817;InbreedingCoeff=0.1437;MQ=69.06;MQ0=26;MQRankSum=-5.450;QD=1.72;ReadPosRankSum=1.231;VQSLOD=2.2186;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:2,9:11:6.01:61,6,0	1/1:13,1:14:20.02:137,20,0	0/0:93,1:28:51.53:0,52,891	0/0:108,0:37:33.46:0,33,745	0/0:14,0:13:36.12:0,36,731	1/1:12,1:11:7.50:23,8,0	1/1:17,0:14:3:25,3,0	0/1:7,0:7:14.50:15,0,15	1/1:18,0:16:20.11:137,20,0	0/1:15,0:15:22.70:23,0,40	0/1:2,0:2:0:0,0,0	0/1:13,0:13:3.92:10,0,4	0/1:10,0:10:6.97:7,0,23	0/1:15,0:15:10.14:10,0,22	0/1:14,0:14:6.58:7,0,19	0/0:4,0:4:2.37:0,2,12	0/0:27,0:27:75.26:0,75,1514	0/1:7,0:7:5.71:6,0,44	./.	0/0:8,0:8:8.49:0,8,48	0/0:19,0:19:7.87:0,8,75	0/1:5,0:5:4.54:5,0,13	0/1:8,0:8:0.06:0,0,0	0/1:13,0:13:0.13:0,0,0	0/1:7,0:6:4.21:4,0,16	0/1:10,0:10:22.67:23,0,44	0/0:9,0:9:0.37:0,0,1	0/0:1,0:1:2.94:0,3,18
chr10	43299267	.	CTG	C	785.79	PASS	AB=0.995;AC=36;AF=0.720;AN=50;BaseQRankSum=6.624;DP=464;FS=1.421;HRun=0;HaplotypeScore=151.4392;InbreedingCoeff=0.3038;MQ=51.34;MQ0=29;MQRankSum=-5.696;QD=2.42;ReadPosRankSum=-2.150;VQSLOD=2.1838;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	1/1:16,2:15:9.76:79,10,0	0/1:50,1:11:22.70:23,0,41	0/0:57,0:13:2.02:0,2,75	0/0:17,0:15:36.06:0,36,565	./.	1/1:13,1:12:5.16:25,5,0	0/1:7,0:5:6.80:14,0,7	1/1:15,1:13:9.48:46,9,0	0/1:18,0:15:3.34:128,0,3	0/1:7,0:7:0:0,0,0	1/1:12,0:11:10.70:47,11,0	1/1:11,0:11:13.45:67,13,0	1/1:20,0:20:21.17:89,21,0	0/1:17,0:16:0:0,0,0	1/1:11,0:11:4.98:17,5,0	0/0:31,0:31:73:0,73,1296	1/1:11,0:10:16.84:87,17,0	1/1:7,0:5:14.92:115,15,0	1/1:13,0:13:2.90:18,3,0	1/1:21,0:19:6.44:47,6,0	0/1:14,0:13:4.99:5,0,13	0/1:21,0:21:0.06:0,0,0	./.	1/1:4,0:3:1.43:4,1,0	0/1:11,0:9:30.08:33,0,30	1/1:17,0:16:15.58:79,16,0	1/1:3,0:2:0.47:1,0,0
chr10	43299273	.	CTG	C	1788.41	PASS	AB=0.814;AC=44;AF=0.815;AN=54;BaseQRankSum=7.608;DP=448;FS=3.159;HRun=0;HaplotypeScore=145.5948;InbreedingCoeff=0.3453;MQ=48.75;MQ0=30;MQRankSum=-6.271;QD=4.60;ReadPosRankSum=-2.335;VQSLOD=2.9580;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:10,0:8:0:0,0,0	1/1:13,2:12:12.30:95,12,0	0/1:29,0:6:11.91:12,0,66	0/1:41,1:9:26.99:27,0,30	0/0:20,0:18:39.08:0,39,667	./.	1/1:15,1:14:0.24:9,0,0	1/1:11,0:8:13.21:65,13,0	1/1:15,1:13:15.03:79,15,0	1/1:17,3:17:36.50:301,36,0	1/1:8,3:11:2.66:25,3,0	1/1:4,7:10:11.98:134,12,0	1/1:9,5:14:20.07:239,20,0	1/1:3,16:19:23.94:341,24,0	0/1:9,8:16:0:0,0,0	1/1:11,1:12:14.18:106,14,0	0/0:30,1:31:84.01:0,84,1415	1/1:8,2:9:21.22:173,21,0	1/1:7,0:5:6.34:41,6,0	1/1:12,0:12:2.86:17,3,0	1/1:23,1:22:4.69:25,5,0	0/1:8,9:15:39.46:39,0,48	0/1:10,12:22:0.06:0,0,0	1/1:14,2:15:3.01:45,3,0	1/1:4,1:4:0.77:2,1,0	1/1:9,1:8:11.90:96,12,0	1/1:17,0:16:13.80:53,14,0	1/1:3,0:1:0.47:1,0,0
chr10	43299279	.	CTG	C	1811.97	PASS	AB=0.961;AC=43;AF=0.796;AN=54;BaseQRankSum=7.201;DP=451;FS=9.232;HRun=0;HaplotypeScore=145.3651;InbreedingCoeff=0.4627;MQ=44.14;MQ0=27;MQRankSum=-5.803;QD=4.68;ReadPosRankSum=-1.100;VQSLOD=2.3872;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:9,1:8:0:0,0,0	1/1:14,2:13:19.93:130,20,0	0/1:20,0:3:1.83:2,0,15	0/1:31,0:7:2.90:3,0,107	0/0:22,0:20:36.06:0,36,684	./.	1/1:6,11:15:4.05:78,4,0	1/1:12,1:9:19.33:121,19,0	1/1:13,1:11:13.88:70,14,0	1/1:22,2:21:10.31:216,10,0	1/1:14,0:13:5.30:27,5,0	1/1:13,0:12:14.76:105,15,0	1/1:13,0:13:11.47:83,11,0	1/1:21,0:21:22.73:129,23,0	1/1:12,8:19:5.53:67,6,0	1/1:9,6:15:11.17:149,11,0	0/0:30,0:30:81:0,81,1400	1/1:8,2:9:15.58:82,16,0	1/1:3,5:6:3.80:208,4,0	1/1:6,8:14:5.91:60,6,0	1/1:23,1:22:3.48:43,3,0	0/1:15,2:15:8.41:8,0,52	1/1:20,4:24:0.70:2,1,0	1/1:14,2:15:2.96:19,3,0	0/0:6,0:5:2.77:0,3,24	1/1:11,0:9:15.42:102,15,0	1/1:5,14:18:20.45:254,20,0	0/1:3,0:1:0:0,0,0
chr10	43299281	.	G	GTCTC	1778.45	PASS	AB=1.000;AC=37;AF=0.740;AN=50;BaseQRankSum=5.681;DP=436;FS=7.200;HRun=0;HaplotypeScore=153.1024;InbreedingCoeff=0.4093;MQ=43.54;MQ0=25;MQRankSum=-4.230;QD=5.85;ReadPosRankSum=-1.570;VQSLOD=1.7753;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:11,0:9:0:0,0,0	0/1:16,0:13:12.38:68,0,12	./.	0/0:24,0:6:0.61:0,1,49	0/0:23,0:21:24.16:0,24,522	./.	1/1:15,0:13:3.72:69,4,0	1/1:13,0:9:23.69:167,24,0	1/1:12,0:9:5.77:31,6,0	1/1:24,0:21:14.15:241,14,0	1/1:14,0:13:5.58:27,6,0	1/1:12,0:11:12.34:79,12,0	1/1:12,0:12:10.41:69,10,0	1/1:21,0:21:21.11:130,21,0	1/1:19,0:18:5.86:68,6,0	1/1:16,0:16:11.90:114,12,0	0/0:30,0:30:69.21:0,69,1171	1/1:9,0:8:8.08:41,8,0	1/1:9,0:7:3.23:259,3,0	1/1:11,0:11:5.93:59,6,0	1/1:8,17:24:2.91:18,3,0	0/1:20,0:18:7.83:8,0,48	0/0:23,0:23:0:0,0,2	1/1:14,0:13:2.84:14,3,0	0/0:6,0:5:2.75:0,3,23	1/1:12,0:10:8.29:116,8,0	1/1:18,0:17:20.97:343,21,0	./.
chr10	43299283	.	C	CTG	744.20	PASS	AB=1.000;AC=14;AF=0.280;AN=50;BaseQRankSum=3.214;DP=438;FS=3.705;HRun=0;HaplotypeScore=150.1045;InbreedingCoeff=0.2704;MQ=42.42;MQ0=24;MQRankSum=-2.665;QD=4.20;ReadPosRankSum=1.913;VQSLOD=3.0182;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:10:2.99:0,3,24	0/0:15,0:13:18.67:0,19,146	./.	0/1:21,0:5:14.21:14,0,40	0/0:23,0:21:48.14:0,48,689	./.	0/1:18,0:15:9.90:10,0,19	0/0:14,0:9:13.23:0,13,94	0/0:11,0:8:8.86:0,9,57	0/1:25,0:22:7.97:8,0,126	0/0:15,0:14:1.80:0,2,9	1/1:13,0:12:14.30:147,14,0	1/1:9,2:12:11.32:268,11,0	1/1:21,0:21:24.08:336,24,0	0/0:18,0:17:4.63:0,5,33	0/0:16,0:16:2.46:0,2,54	0/0:30,0:30:72.23:0,72,1076	0/1:9,0:8:29.14:29,0,62	0/0:9,0:7:20.19:0,20,144	0/0:12,0:12:3.88:0,4,27	0/0:27,0:25:3.01:0,3,34	0/1:20,0:18:33.40:33,0,40	0/1:23,0:23:0.55:1,0,1	1/1:11,3:13:3.01:47,3,0	0/0:6,0:5:5.69:0,6,50	0/0:12,0:10:18.09:0,18,128	0/0:19,0:18:20.09:0,20,103	./.
chr10	43299285	.	CTG	C	2370.26	PASS	AB=0.815;AC=38;AF=0.760;AN=50;BaseQRankSum=6.171;DP=430;FS=11.892;HRun=0;HaplotypeScore=144.0881;InbreedingCoeff=0.3685;MQ=39.42;MQ0=21;MQRankSum=-4.888;QD=7.14;ReadPosRankSum=-0.019;VQSLOD=2.9119;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:12,1:11:0.08:0,0,0	1/1:14,1:13:23.08:145,23,0	./.	0/0:14,1:2:2.73:0,3,56	0/0:24,0:22:49.38:0,49,719	./.	1/1:19,1:17:18:180,18,0	1/1:6,8:9:23.92:288,24,0	1/1:10,0:7:8.76:51,9,0	1/1:22,3:22:13.56:277,14,0	1/1:13,2:14:5.38:29,5,0	1/1:5,8:12:21.04:248,21,0	1/1:6,6:12:21.95:298,22,0	1/1:3,18:21:23.94:354,24,0	1/1:18,1:18:2.92:31,3,0	1/1:15,1:16:7.81:63,8,0	0/0:27,0:27:72.19:0,72,1238	1/1:6,2:7:13.41:98,13,0	1/1:9,0:8:0.10:42,0,0	0/0:10,2:12:0.90:0,1,40	1/1:23,4:25:3.48:42,3,0	0/1:6,14:18:39.53:40,0,52	1/1:7,15:22:0.70:2,1,0	1/1:12,3:14:5.99:67,6,0	0/1:6,1:6:10.02:30,0,10	1/1:9,2:9:16.28:176,16,0	0/1:17,3:18:50.84:57,0,51	./.
chr10	43299291	.	CTG	C	1504.63	PASS	AB=0.989;AC=36;AF=0.667;AN=54;BaseQRankSum=5.202;DP=440;FS=12.452;HRun=0;HaplotypeScore=133.8178;InbreedingCoeff=0.1839;MQ=40.94;MQ0=22;MQRankSum=-5.270;QD=4.43;ReadPosRankSum=1.699;VQSLOD=2.2382;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:11:1.22:0,1,3	1/1:15,0:13:18.89:116,19,0	1/1:10,0:1:2.04:6,2,0	0/1:11,0:2:0.61:1,0,46	0/1:23,1:23:41:41,0,281	./.	1/1:20,0:17:20.23:189,20,0	1/1:20,0:15:20.74:118,21,0	1/1:9,0:6:8.79:52,9,0	1/1:26,0:23:10.73:203,11,0	1/1:15,0:14:8.28:52,8,0	0/1:14,0:13:31.53:32,0,73	0/1:12,0:12:16.90:17,0,24	0/1:20,0:20:25.15:51,0,25	1/1:10,9:18:14.56:205,15,0	1/1:6,11:17:3.72:188,4,0	0/0:26,0:26:59.02:0,59,920	1/1:6,0:5:10.46:82,10,0	1/1:12,0:11:6.31:68,6,0	0/0:11,1:12:0.82:0,1,24	1/1:27,0:25:3.48:41,3,0	0/1:20,0:18:3:3,0,69	0/0:25,0:25:5.04:0,5,48	0/0:18,0:17:7.21:0,7,50	0/1:7,0:6:10.01:30,0,10	1/1:11,0:9:14.61:99,15,0	0/1:20,1:19:24.93:25,0,51	1/1:4,0:2:5.98:47,6,0
chr10	43300594	.	T	TC	1002.25	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=-3.171;DP=606;FS=3.313;HRun=2;HaplotypeScore=94.7734;InbreedingCoeff=0.6626;MQ=86.96;MQ0=0;MQRankSum=-2.163;QD=17.58;ReadPosRankSum=1.028;VQSLOD=3.8989;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,29:30:78.18:1095,78,0	0/0:5,0:5:15.05:0,15,186	0/0:34,0:27:33.61:0,34,410	0/1:27,0:24:9.92:10,0,364	0/0:17,0:17:48.08:0,48,575	0/0:24,0:24:69.13:0,69,799	0/0:16,0:16:45.14:0,45,557	0/0:29,0:29:78.22:0,78,927	0/0:18,0:18:51.14:0,51,610	0/0:27,0:27:72.22:0,72,882	0/0:18,0:18:54.13:0,54,650	0/0:17,0:17:48.11:0,48,556	0/0:20,0:20:60.17:0,60,729	0/0:17,0:17:45.14:0,45,554	0/0:25,0:25:54.14:0,54,643	0/0:12,0:12:30.07:0,30,349	0/0:21,0:21:57.18:0,57,702	0/0:20,0:20:54.17:0,54,668	0/0:21,0:21:51.06:0,51,596	0/0:20,0:21:56.37:0,56,653	0/0:16,0:16:42.12:0,42,506	0/0:19,0:19:54.15:0,54,646	0/0:18,0:18:48.61:0,49,584	0/0:23,0:23:60.15:0,60,724	0/0:29,0:29:72.18:0,72,847	0/0:33,0:33:93.25:0,93,1099	0/0:31,0:31:93.23:0,93,1118	0/0:16,0:16:42.13:0,42,519
chr10	43300598	.	GA	G	5426.45	PASS	AB=0.764;AC=26;AF=0.464;AN=56;BaseQRankSum=3.608;DP=615;FS=4.446;HRun=11;HaplotypeScore=79.2619;InbreedingCoeff=0.8376;MQ=87.78;MQ0=1;MQRankSum=0.364;QD=16.15;ReadPosRankSum=1.092;VQSLOD=5.6672;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:96.12:0,96,975	0/0:6,0:6:15.01:0,15,150	0/1:41,1:28:11.47:11,0,255	0/0:26,1:25:14.69:0,15,160	0/0:18,0:18:39.09:0,39,408	0/0:23,0:25:65.87:0,66,667	0/0:16,0:16:45.09:0,45,469	1/1:3,24:27:65.88:537,66,0	0/0:17,0:17:20.47:0,20,422	1/1:6,24:30:12.11:514,12,0	1/1:4,14:19:6.30:245,6,0	0/0:15,2:17:20.47:0,20,420	0/0:19,1:20:20.44:0,20,413	0/0:17,0:17:38.59:0,39,393	1/1:3,23:26:50.92:419,51,0	1/1:0,11:11:32.96:271,33,0	0/0:20,0:21:44.95:0,45,462	1/1:2,19:21:47.94:394,48,0	0/1:3,13:16:17.88:268,0,18	1/1:2,16:19:49.98:400,50,0	1/1:2,12:14:32.96:271,33,0	0/0:15,0:17:44.90:0,45,443	0/0:17,0:20:42.41:0,42,431	0/0:19,0:22:53.94:0,54,548	1/1:4,23:27:27.94:436,28,0	1/1:4,28:33:85.05:691,85,0	1/1:2,32:35:51.90:652,52,0	1/1:3,13:16:37.18:317,37,0
chr10	43300707	.	TAC	T	671.06	PASS	AB=0.948;AC=20;AF=0.385;AN=52;BaseQRankSum=2.343;DP=578;FS=1.767;HRun=0;HaplotypeScore=120.6462;InbreedingCoeff=0.4428;MQ=65.71;MQ0=11;MQRankSum=1.026;QD=2.63;ReadPosRankSum=1.718;VQSLOD=2.5713;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:36:24.01:0,24,262	0/0:10,0:10:1.25:0,1,3	./.	0/0:22,0:16:0.47:0,0,1	0/0:14,0:14:2.52:0,3,25	0/0:16,0:16:11.98:0,12,114	1/1:18,0:18:0.94:1,1,0	./.	0/0:17,0:23:6:0,6,52	1/1:19,2:20:5.56:56,6,0	1/1:9,2:11:3:32,3,0	0/0:26,0:26:6.01:0,6,63	0/0:11,0:12:6.01:0,6,63	0/0:22,0:22:9.01:0,9,92	1/1:12,11:23:27.07:292,27,0	1/1:12,4:17:11.86:111,12,0	0/0:27,0:26:21.01:0,21,232	1/1:20,1:31:22.89:130,23,0	0/0:13,0:13:6.01:0,6,58	0/0:16,0:16:3.01:0,3,34	0/1:28,2:28:99:102,0,132	0/0:23,0:22:8.97:0,9,71	0/0:23,0:23:11.76:0,12,135	0/1:2,0:35:0:0,0,0	1/1:17,0:21:2.84:14,3,0	1/1:19,1:21:8.69:60,9,0	0/1:16,1:17:5.40:5,0,209	0/1:9,1:10:23.40:23,0,54
chr10	43301270	.	AC	A	2040.58	PASS	AB=1.000;AC=13;AF=0.260;AN=50;BaseQRankSum=-2.874;DP=270;FS=17.861;HRun=8;HaplotypeScore=41.0994;InbreedingCoeff=0.5721;MQ=86.51;MQ0=0;MQRankSum=-0.155;QD=17.90;ReadPosRankSum=1.448;VQSLOD=2.0863;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:26:37.13:0,37,205	1/1:1,5:6:12.02:116,12,0	0/0:19,0:17:3.57:0,4,387	0/1:12,0:12:6.39:6,0,166	1/1:4,13:17:36.05:347,36,0	1/1:4,14:18:39.06:376,39,0	1/1:5,26:31:74.90:724,75,0	./.	1/1:5,22:27:63.09:608,63,0	0/0:2,0:2:3.01:0,3,31	0/0:2,0:2:0:0,0,1	0/0:2,0:13:20.25:0,20,112	0/0:4,0:12:14.16:0,14,73	0/0:5,0:11:26.30:0,26,139	0/0:6,0:6:4.39:0,4,44	0/0:4,0:4:2.91:0,3,25	0/0:24,1:25:46.24:0,46,830	0/0:2,0:2:5.98:0,6,55	1/1:3,0:3:5.25:23,5,0	./.	0/0:4,0:4:4.24:0,4,27	0/0:0,0:7:14.38:0,14,73	0/0:0,0:4:2.88:0,3,15	0/0:1,0:7:5.75:0,6,29	0/0:2,0:2:3.01:0,3,32	0/0:3,0:3:3.01:0,3,35	0/0:3,0:3:3.41:0,3,19	./.
chr10	43302083	.	C	CA	511.69	PASS	AB=0.800;AC=3;AF=0.054;AN=56;BaseQRankSum=-2.022;DP=541;FS=0.000;HRun=9;HaplotypeScore=52.0124;InbreedingCoeff=0.5574;MQ=79.89;MQ0=0;MQRankSum=-2.851;QD=15.99;ReadPosRankSum=-1.354;VQSLOD=3.1771;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,21:24:31.10:571,31,0	0/0:9,0:9:23.99:0,24,208	0/0:20,1:19:3.59:0,4,218	0/0:13,0:12:17.93:0,18,189	0/0:18,0:18:44.96:0,45,386	0/0:19,0:19:44.98:0,45,391	0/0:18,0:18:41.98:0,42,365	0/0:31,0:31:77.91:0,78,665	0/0:13,0:13:38.99:0,39,339	0/0:34,0:34:83.95:0,84,729	0/0:22,0:22:59.99:0,60,520	0/0:19,0:19:44.97:0,45,391	0/0:14,0:14:38.99:0,39,339	0/0:18,0:18:47.98:0,48,417	0/0:20,0:20:50.98:0,51,443	0/0:11,0:11:26.99:0,27,234	0/0:28,0:28:77.94:0,78,668	0/0:27,0:27:40.04:0,40,562	0/0:15,1:16:11.80:0,12,329	0/0:15,0:15:44.96:0,45,385	0/1:5,2:8:46.32:46,0,90	0/0:19,0:20:40.99:0,41,345	0/0:13,0:13:32.99:0,33,287	0/0:21,0:21:59.96:0,60,516	0/0:26,0:26:65.97:0,66,573	0/0:36,0:36:83.95:0,84,729	0/0:20,0:20:53.98:0,54,469	0/0:7,0:6:14.98:0,15,130
chr10	43302381	.	TC	T	9606.73	PASS	AB=0.556;AC=49;AF=0.875;AN=56;BaseQRankSum=3.508;DP=544;FS=2.140;HRun=8;HaplotypeScore=62.3855;InbreedingCoeff=0.8619;MQ=75.48;MQ0=0;MQRankSum=-1.970;QD=19.49;ReadPosRankSum=4.029;VQSLOD=4.8160;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:9,0:48:72.54:211,73,0	1/1:0,6:6:12.02:116,12,0	0/0:10,0:10:18.05:0,18,212	0/0:16,0:15:31.21:0,31,350	1/1:5,9:14:24.03:227,24,0	1/1:1,9:10:24.03:231,24,0	1/1:7,31:38:81.12:782,81,0	1/1:4,17:21:51.04:481,51,0	1/1:1,18:19:51.08:492,51,0	1/1:2,11:13:27.04:260,27,0	1/1:4,12:16:33.04:314,33,0	1/1:3,32:35:84.11:811,84,0	1/1:2,15:17:33.05:319,33,0	1/1:1,15:16:39.06:376,39,0	1/1:3,14:17:36.05:348,36,0	1/1:2,21:23:54.09:521,54,0	0/0:25,0:25:63.12:0,63,710	1/1:1,26:27:66.11:637,66,0	1/1:9,12:21:47.95:437,48,0	1/1:2,7:9:19.58:176,20,0	1/1:5,33:38:44.89:715,45,0	0/1:2,8:10:3.44:153,0,3	1/1:1,6:7:15.02:145,15,0	1/1:2,33:35:81.13:782,81,0	1/1:0,15:15:30.05:290,30,0	1/1:3,10:13:30.05:289,30,0	1/1:2,12:14:27.04:260,27,0	1/1:2,9:11:24.03:230,24,0
chr10	43303009	.	GAC	G	5743.23	PASS	AB=0.939;AC=19;AF=0.339;AN=56;BaseQRankSum=13.162;DP=831;FS=1.800;HRun=0;HaplotypeScore=111.5348;InbreedingCoeff=0.6070;MQ=63.33;MQ0=1;MQRankSum=-0.353;QD=17.30;ReadPosRankSum=4.258;VQSLOD=5.1684;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:13,27:41:77.91:921,78,0	0/0:15,0:15:42.14:0,42,679	0/0:28,0:23:45.15:0,45,709	0/0:32,0:29:72.10:0,72,1093	0/0:29,0:29:75.24:0,75,1195	0/0:24,0:24:41.39:0,41,962	0/0:30,1:31:35.04:0,35,1076	0/0:39,0:39:72.23:0,72,1127	0/0:28,3:31:3.83:0,4,1076	0/1:21,1:22:5.55:6,0,755	0/0:19,0:19:45.15:0,45,738	1/1:4,20:23:63.20:779,63,0	1/1:5,17:24:59.84:684,60,0	1/1:4,20:25:69.04:815,69,0	0/0:33,0:33:69.24:0,69,1122	0/0:23,0:23:60.19:0,60,954	0/0:40,1:41:65.13:0,65,1547	0/0:25,1:26:29.04:0,29,995	0/1:27,1:28:27.14:27,0,821	0/1:27,2:29:8.19:8,0,915	0/0:62,1:63:99:0,104,2190	1/1:4,19:24:60.19:743,60,0	1/1:4,24:30:65.90:791,66,0	1/1:10,27:38:37.37:929,37,0	0/0:28,1:29:35.02:0,35,1070	0/0:35,1:36:53.13:0,53,1369	0/1:22,2:24:20.22:20,0,715	0/1:20,2:22:20.22:20,0,733
chr10	43303094	.	T	TAAC	32557.84	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-7.612;DP=780;FS=10.901;HRun=0;HaplotypeScore=126.0033;InbreedingCoeff=0.9999;MQ=77.47;MQ0=0;MQRankSum=-9.865;QD=54.90;ReadPosRankSum=0.004;VQSLOD=6.3586;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:21,26:48:99:1954,105,0	0/0:11,0:11:33.11:0,33,577	0/0:20,0:20:60.17:0,60,993	0/0:21,0:21:54.18:0,54,952	0/0:11,0:11:33.11:0,33,582	0/0:21,0:21:60.21:0,60,1058	0/0:36,0:36:99:0,108,1877	1/1:13,19:37:99:2112,102,0	0/0:33,0:33:96.31:0,96,1665	1/1:4,23:34:96.23:1923,96,0	1/1:3,15:19:42.10:919,42,0	1/1:8,21:28:78.26:1753,78,0	1/1:4,21:26:75.26:1683,75,0	1/1:5,27:33:93.31:2064,93,0	1/1:0,25:26:69.24:1625,69,0	1/1:1,21:24:66.23:1556,66,0	0/0:34,0:34:99:0,102,1757	1/1:1,19:20:54.19:1276,54,0	1/1:7,19:32:90.20:1809,90,0	1/1:7,17:28:60.19:1347,60,0	1/1:4,31:42:78.27:1812,78,0	1/1:7,15:22:57.15:1206,57,0	1/1:11,8:20:39.12:792,39,0	1/1:8,29:37:99:2285,105,0	1/1:3,18:27:60.21:1390,60,0	1/1:5,27:36:99:2134,105,0	1/1:1,28:30:84.03:1974,84,0	1/1:8,14:22:42.12:942,42,0
chr10	43305322	.	CGT	C	1959.13	PASS	AB=0.956;AC=31;AF=0.596;AN=52;BaseQRankSum=-1.577;DP=602;FS=15.835;HRun=0;HaplotypeScore=118.2341;InbreedingCoeff=-0.0569;MQ=68.33;MQ0=13;MQRankSum=1.082;QD=4.03;ReadPosRankSum=3.507;VQSLOD=1.8172;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:27:13.82:30,0,14	1/1:4,0:4:2.98:22,3,0	./.	0/0:27,0:24:0:0,0,0	0/0:10,0:9:2.98:0,3,45	1/1:15,1:18:14.29:105,14,0	0/1:22,0:22:12.36:12,0,16	./.	0/0:18,0:18:14.82:0,15,104	0/1:17,0:17:0.32:0,0,73	0/1:10,0:9:14.08:14,0,22	1/1:23,10:32:42.15:431,42,0	1/1:10,4:15:15.76:149,16,0	1/1:14,7:22:16.73:273,17,0	0/1:18,1:18:29.44:29,0,30	1/1:9,1:9:1.70:32,2,0	0/1:28,3:33:90.01:90,0,365	0/1:34,0:34:1.72:2,0,298	0/1:21,0:23:4.12:25,0,4	1/1:11,0:13:0.45:1,0,0	0/1:73,1:72:47:168,0,47	1/1:10,2:11:12.03:130,12,0	0/1:14,1:14:0.56:46,0,1	1/1:20,13:33:39.06:418,39,0	0/1:14,1:13:12.68:60,0,13	0/0:20,0:20:3.80:0,4,74	0/1:22,1:25:52.81:54,0,53	0/1:7,0:7:13.34:14,0,13
chr10	43305350	.	T	TGC	2445.40	PASS	AB=0.879;AC=23;AF=0.411;AN=56;BaseQRankSum=1.143;DP=597;FS=7.832;HRun=0;HaplotypeScore=141.2925;InbreedingCoeff=-0.2339;MQ=46.38;MQ0=29;MQRankSum=-1.043;QD=5.42;ReadPosRankSum=0.884;VQSLOD=2.7831;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:28:34.09:0,34,245	0/1:6,0:6:13.58:15,0,14	0/0:3,0:1:2.99:0,3,24	0/0:6,0:5:14.93:0,15,119	0/0:10,0:8:15.47:0,15,146	0/0:23,0:23:8.35:0,8,85	0/0:29,0:28:22.31:0,22,213	0/1:22,0:15:31.16:47,0,31	0/0:19,0:19:22.37:0,22,238	0/1:6,12:17:37.65:124,0,38	0/1:7,7:11:2.65:80,0,3	0/1:30,0:29:48.23:48,0,247	0/1:15,1:15:59.59:60,0,118	0/1:22,2:21:90.06:90,0,143	1/1:15,2:16:6.36:133,6,0	1/1:5,3:7:14.48:190,14,0	0/0:26,0:25:23.96:0,24,544	0/1:29,7:34:26.97:619,0,27	0/1:18,0:18:53.61:143,0,54	1/1:12,1:12:5.62:43,6,0	0/1:63,9:65:46.96:380,0,47	0/1:16,0:15:37:37,0,85	0/1:13,0:12:8.87:71,0,9	0/1:52,2:52:6.26:6,0,330	0/1:6,13:17:15.19:194,0,15	0/1:23,1:21:70.06:147,0,70	0/1:11,11:21:42.72:103,0,43	0/1:8,1:5:3.03:84,0,3
chr10	43305356	.	T	TGC	4444.50	PASS	AB=0.989;AC=40;AF=0.714;AN=56;BaseQRankSum=3.471;DP=582;FS=1.734;HRun=0;HaplotypeScore=134.5208;InbreedingCoeff=-0.0150;MQ=46.29;MQ0=31;MQRankSum=0.934;QD=7.92;ReadPosRankSum=0.823;VQSLOD=4.5099;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:32,0:30:39.39:146,0,39	1/1:4,1:5:6.29:64,6,0	0/0:4,0:1:3.01:0,3,41	0/0:5,0:2:5.85:0,6,54	0/0:11,0:10:21.45:0,21,193	1/1:24,2:26:21.44:312,21,0	1/1:27,1:27:19.32:222,19,0	1/1:20,0:12:20.52:111,21,0	0/1:19,0:19:41.77:42,0,68	0/1:14,0:13:11.83:148,0,12	0/1:15,0:12:10.13:72,0,10	1/1:33,0:32:45.89:343,46,0	1/1:13,0:12:24.59:146,25,0	1/1:22,0:19:3.85:143,4,0	1/1:20,0:19:10.30:162,10,0	1/1:11,0:10:21.09:249,21,0	0/1:21,3:23:99:110,0,446	0/1:33,0:31:26.28:614,0,26	1/1:19,0:18:25.31:220,25,0	1/1:12,0:11:2.61:19,3,0	1/1:64,0:57:0.65:374,1,0	0/1:16,0:15:9.95:84,0,10	1/1:12,0:11:11.54:105,12,0	0/1:55,0:53:8.36:217,0,8	1/1:17,0:15:2.45:204,2,0	0/1:23,0:19:9.87:150,0,10	0/1:20,0:19:7.34:111,0,7	1/1:8,0:4:6.01:79,6,0
chr10	43305372	.	TGC	T	228.63	PASS	AB=0.981;AC=10;AF=0.185;AN=54;BaseQRankSum=1.715;DP=615;FS=10.930;HRun=0;HaplotypeScore=152.6591;InbreedingCoeff=-0.1278;MQ=48.33;MQ0=28;MQRankSum=0.054;QD=0.94;ReadPosRankSum=-0.639;VQSLOD=2.1806;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:32,0:30:41.07:41,0,187	1/1:3,1:4:4.56:35,5,0	./.	0/0:11,0:1:3.01:0,3,47	0/0:15,0:14:26.80:0,27,385	0/1:21,0:21:13.26:13,0,257	0/1:30,1:30:15.62:16,0,134	0/1:23,1:16:32.64:33,0,270	0/0:21,0:21:5.77:0,6,108	0/0:11,0:10:23.57:0,24,326	0/0:13,0:10:7.83:0,8,92	0/1:31,0:30:30.63:31,0,594	0/0:15,0:14:1.55:0,2,218	0/0:23,0:20:1.82:0,2,381	0/1:24,1:24:35.07:35,0,107	0/1:12,0:12:16.40:16,0,222	0/0:24,0:23:60.10:0,60,984	0/0:38,0:36:99:0,102,1609	0/0:21,0:20:47.79:0,48,511	0/0:13,0:12:5.33:0,5,43	0/1:59,3:57:99:145,0,323	0/0:21,0:20:2.72:0,3,69	0/0:13,0:12:10.14:0,10,86	0/0:59,0:56:52.98:0,53,801	0/0:17,0:15:21.04:0,21,282	0/0:23,0:20:53.14:0,53,753	0/0:16,0:15:23.33:0,23,307	0/0:8,0:4:6.02:0,6,74
chr10	43305378	.	TGC	T	2071.30	PASS	AB=0.932;AC=22;AF=0.393;AN=56;BaseQRankSum=-2.723;DP=631;FS=0.452;HRun=0;HaplotypeScore=141.2372;InbreedingCoeff=-0.3361;MQ=51.14;MQ0=29;MQRankSum=2.771;QD=4.30;ReadPosRankSum=-0.407;VQSLOD=2.9476;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:36,0:34:69.46:71,0,69	1/1:3,1:4:4.56:36,5,0	0/0:16,0:2:4.82:0,5,33	0/0:15,0:2:5.69:0,6,59	0/0:14,0:14:14.84:0,15,310	0/1:21,0:21:28.10:46,0,28	0/1:30,1:30:41.49:88,0,41	0/1:24,0:16:42.54:43,0,129	0/1:19,0:19:7.02:74,0,7	0/1:11,0:10:3.81:4,0,105	0/1:12,0:9:16.96:17,0,37	0/1:15,16:30:99:546,0,175	0/1:9,10:18:22.90:263,0,23	0/1:24,1:22:81.83:82,0,101	0/1:26,1:26:6.32:57,0,6	0/1:14,0:14:22.02:22,0,71	0/0:22,0:21:38.65:0,39,843	0/0:38,0:36:33.04:0,33,738	0/0:20,0:19:27.51:0,28,227	0/1:13,0:12:16.64:17,0,39	0/1:62,0:57:99:200,0,165	1/1:6,17:22:8.18:429,8,0	0/1:5,11:15:47.43:216,0,47	0/1:54,1:52:9.98:10,0,249	0/0:15,0:14:16.99:0,17,128	0/1:24,0:21:1.38:1,0,238	0/1:15,0:14:6.71:7,0,63	0/0:9,0:5:2.37:0,2,8
chr10	43305380	.	C	CGTGT	4125.21	PASS	AB=0.990;AC=36;AF=0.643;AN=56;BaseQRankSum=-1.159;DP=641;FS=8.667;HRun=0;HaplotypeScore=155.7321;InbreedingCoeff=0.0308;MQ=51.24;MQ0=30;MQRankSum=0.957;QD=7.21;ReadPosRankSum=1.327;VQSLOD=2.3970;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:35,0:33:21.96:326,22,0	1/1:4,0:4:5.90:40,6,0	0/0:17,0:2:5.58:0,6,32	0/0:15,0:2:5.66:0,6,33	0/0:13,0:14:26.77:0,27,413	1/1:22,0:22:19.88:193,20,0	0/1:29,0:28:7.60:218,0,8	0/1:25,0:17:45.24:126,0,45	1/1:5,0:21:2.36:20,2,0	0/1:13,0:12:36.15:36,0,36	0/1:12,0:9:12.22:32,0,12	1/1:28,1:30:48.89:829,49,0	1/1:18,0:18:23.79:361,24,0	1/1:13,12:22:8.75:117,9,0	1/1:27,0:26:17.14:156,17,0	1/1:13,0:13:15:134,15,0	0/0:22,0:21:33.17:0,33,646	0/1:37,0:36:99:123,0,224	0/1:19,0:18:0.46:0,0,78	0/1:13,0:12:16.35:16,0,21	0/1:63,0:58:99:188,0,124	1/1:24,0:23:30.10:556,30,0	0/1:17,0:16:41.44:299,0,41	1/1:16,33:55:24.87:235,25,0	0/1:15,1:15:13.10:13,0,59	0/1:23,0:21:39.02:39,0,121	0/1:15,0:14:15.56:16,0,16	1/1:9,0:5:3.01:52,3,0
chr10	43305925	.	C	CA	13350.09	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-16.482;DP=653;FS=6.593;HRun=1;HaplotypeScore=57.1204;InbreedingCoeff=0.9970;MQ=71.30;MQ0=0;MQRankSum=-1.690;QD=39.73;ReadPosRankSum=0.184;VQSLOD=5.1943;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,50:50:99:1932,129,0	0/0:13,0:13:33.11:0,33,428	0/0:9,0:9:21.07:0,21,273	0/0:16,0:16:32.83:0,33,386	0/0:18,0:18:48.12:0,48,593	0/0:14,0:14:42.12:0,42,531	0/0:44,0:44:99:0,132,1684	1/1:0,21:21:60.19:878,60,0	0/0:21,0:21:60.19:0,60,779	1/1:2,19:21:60.14:815,60,0	1/1:0,13:13:36.08:513,36,0	0/0:31,0:31:87.28:0,87,1129	0/0:19,0:19:57.16:0,57,722	0/0:29,0:29:87.27:0,87,1114	1/1:0,24:24:69.23:1034,69,0	1/1:2,22:24:27.28:905,27,0	0/0:32,0:32:96.31:0,96,1243	1/1:0,20:20:57.19:854,57,0	1/1:0,20:20:60.18:857,60,0	1/1:0,19:19:42.10:604,42,0	1/1:0,44:44:99:1753,117,0	0/0:20,0:20:57.14:0,57,721	0/0:24,0:24:69.14:0,69,845	0/0:27,0:27:78.25:0,78,1011	1/1:0,27:27:69.23:1034,69,0	1/1:1,25:26:78.23:1117,78,0	1/1:2,19:21:57.15:829,57,0	1/1:1,5:6:15.05:225,15,0
chr10	43308248	.	T	TAGGAGGAAG	28194.64	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=10.850;DP=697;FS=4.680;HRun=0;HaplotypeScore=260.4537;InbreedingCoeff=0.9834;MQ=57.71;MQ0=3;MQRankSum=-12.388;QD=57.89;ReadPosRankSum=-2.818;VQSLOD=4.0209;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,21:39:12.04:431,12,0	0/0:7,0:7:21.03:0,21,504	0/0:32,0:23:27.28:0,27,688	0/0:27,0:17:19.44:0,19,588	0/0:27,0:27:72.23:0,72,1882	0/0:20,0:20:36.11:0,36,819	0/0:34,0:34:60.15:0,60,1483	1/1:33,0:32:48.12:903,48,0	0/0:24,0:24:57.20:0,57,1515	1/1:28,1:29:72.19:1947,72,0	1/1:22,1:23:51.16:1561,51,0	1/1:19,5:24:48.16:1534,48,0	1/1:19,3:22:51.17:1635,51,0	1/1:22,4:27:75.21:2139,75,0	1/1:33,4:36:87.28:2845,87,0	1/1:19,4:24:54.17:1612,54,0	0/0:39,0:37:45.14:0,45,1903	1/1:9,3:12:30.05:930,30,0	1/1:11,0:10:12.04:434,12,0	1/1:12,1:13:33.10:857,33,0	1/1:20,0:17:18:368,18,0	1/1:28,4:32:78.25:2177,78,0	1/1:24,6:30:75.16:2162,75,0	1/1:22,2:24:23.98:463,24,0	1/1:16,6:22:63.18:1860,63,0	1/1:30,4:33:71.85:1922,72,0	1/1:21,3:24:60.18:1876,60,0	1/1:6,1:7:15.05:537,15,0
chr10	43308281	.	G	GATT	1048.70	PASS	AB=0.956;AC=18;AF=0.321;AN=56;BaseQRankSum=11.262;DP=578;FS=7.613;HRun=0;HaplotypeScore=262.3598;InbreedingCoeff=-0.3338;MQ=37.92;MQ0=23;MQRankSum=-9.603;QD=3.31;ReadPosRankSum=9.833;VQSLOD=0.1392;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:18:27.09:0,27,462	0/0:8,0:8:24.08:0,24,418	0/0:32,0:9:18.06:0,18,302	0/0:45,0:13:26.81:0,27,357	0/0:24,0:24:72.25:0,72,1257	0/0:20,0:19:42.14:0,42,736	0/0:34,0:32:84.21:0,84,1362	0/1:35,0:28:95.54:96,0,377	0/0:23,0:23:60.19:0,60,1031	0/0:18,0:18:1.72:0,2,125	0/1:16,0:16:23.53:24,0,118	0/1:16,0:16:44.74:58,0,45	0/1:17,0:17:27.66:28,0,97	0/1:22,0:22:44.24:44,0,83	0/1:28,1:29:99:99,0,134	0/1:15,1:16:17.54:114,0,18	0/0:32,1:30:56:0,56,1336	0/1:12,1:13:51.47:58,0,51	0/1:10,0:7:31.71:32,0,77	1/1:11,0:11:18.27:84,18,0	0/1:6,2:6:42.60:49,0,43	0/1:25,0:24:69.43:84,0,69	0/1:23,0:23:75.26:75,0,111	0/1:9,5:13:27.50:265,0,28	0/1:19,0:18:58.01:58,0,66	0/1:23,0:21:24.44:24,0,115	0/1:18,0:18:21.25:21,0,88	0/0:5,0:5:7.66:0,8,118
chr10	43308286	.	G	GGAA	10813.03	PASS	AB=0.789;AC=33;AF=0.589;AN=56;BaseQRankSum=7.795;DP=581;FS=0.380;HRun=0;HaplotypeScore=227.1406;InbreedingCoeff=0.5754;MQ=37.10;MQ0=26;MQRankSum=-10.105;QD=32.37;ReadPosRankSum=6.702;VQSLOD=4.9966;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:17:29.51:0,30,382	0/0:7,0:7:21.06:0,21,313	0/0:36,0:8:8.29:0,8,186	0/0:49,0:14:28.32:0,28,271	0/0:24,0:24:66.18:0,66,965	0/0:20,0:19:42.13:0,42,646	0/0:31,0:29:62.90:0,63,802	0/1:31,7:29:13.89:465,0,14	0/0:24,0:24:63.13:0,63,883	1/1:8,9:17:42.10:722,42,0	0/1:7,8:15:15.86:412,0,16	1/1:6,9:15:30.56:620,31,0	1/1:9,8:17:18.58:548,19,0	1/1:7,14:21:0.66:798,1,0	1/1:15,14:29:38.28:1043,38,0	1/1:4,11:15:34.69:760,35,0	0/0:36,0:33:85.48:0,85,1262	1/1:8,6:13:9.57:301,10,0	0/1:7,4:8:4.46:193,0,4	1/1:1,8:10:22.89:458,23,0	0/1:10,1:8:43.31:54,0,43	1/1:7,17:23:35.03:992,35,0	1/1:9,13:22:28.80:818,29,0	0/1:9,3:11:33.43:77,0,33	1/1:6,12:17:30.43:800,30,0	1/1:9,13:20:47.17:907,47,0	1/1:9,9:18:40.75:779,41,0	1/1:4,1:5:1.84:65,2,0
chr10	43308298	.	AGAG	A	1965.75	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-5.581;DP=555;FS=1.903;HRun=0;HaplotypeScore=238.0662;InbreedingCoeff=0.8846;MQ=36.90;MQ0=24;MQRankSum=5.381;QD=26.21;ReadPosRankSum=1.489;VQSLOD=3.5401;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:18:3.90:0,4,379	1/1:1,8:9:15.02:204,15,0	0/0:52,0:11:24.05:0,24,425	0/0:57,0:15:28.87:0,29,466	0/0:23,0:23:63.22:0,63,1352	1/1:2,16:18:36.12:570,36,0	1/1:4,23:25:30.17:683,30,0	0/0:31,0:22:39.53:0,40,407	1/1:4,17:21:42.14:666,42,0	0/0:16,0:16:32.47:0,32,305	0/0:15,0:15:23.16:0,23,236	0/0:14,0:14:37.48:0,37,255	0/0:14,0:14:37.79:0,38,302	0/0:19,0:19:43.29:0,43,332	0/0:24,0:24:56.10:0,56,401	0/0:14,0:14:40.69:0,41,345	0/0:36,0:33:88.99:0,89,1731	0/0:13,0:12:13.33:0,13,305	0/0:11,0:9:17.76:0,18,222	0/0:10,0:10:23.35:0,23,224	0/0:12,0:9:10.62:0,11,109	0/0:21,0:20:49.50:0,50,477	0/0:19,0:19:40.12:0,40,417	0/0:12,0:11:14.53:0,15,175	0/0:16,0:16:37.01:0,37,422	0/0:17,0:15:41.09:0,41,362	0/0:14,0:14:18.18:0,18,275	0/0:1,0:1:2.80:0,3,13
chr10	43308312	.	GGAA	G	3839.19	PASS	AB=0.844;AC=34;AF=0.607;AN=56;BaseQRankSum=8.404;DP=466;FS=0.993;HRun=0;HaplotypeScore=207.5358;InbreedingCoeff=0.6979;MQ=48.19;MQ0=12;MQRankSum=-8.326;QD=17.45;ReadPosRankSum=-1.031;VQSLOD=2.9081;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:5.55:0,6,316	0/0:8,0:8:6:0,6,54	0/0:45,0:10:21.50:0,22,354	0/0:50,0:20:36.19:0,36,445	0/0:25,0:25:66.20:0,66,1352	0/0:17,0:17:38.36:0,38,371	0/0:26,0:25:47.62:0,48,435	0/1:12,4:13:19.27:186,0,19	0/0:19,0:19:50.64:0,51,550	1/1:7,4:11:20.76:230,21,0	1/1:9,4:12:2.88:120,3,0	1/1:7,4:10:18.11:198,18,0	1/1:5,5:10:17.89:215,18,0	1/1:7,8:15:32.20:360,32,0	1/1:10,9:19:12.94:374,13,0	1/1:6,7:13:2.40:257,2,0	0/0:32,0:31:74.14:0,74,1506	1/1:7,2:9:3.48:48,3,0	1/1:5,2:5:11.96:115,12,0	1/1:7,4:10:18.72:180,19,0	0/1:7,1:7:29.37:29,0,31	1/1:7,10:17:35.72:382,36,0	1/1:10,5:15:14.22:184,14,0	0/0:7,1:8:6.96:0,7,48	1/1:10,6:15:11.58:256,12,0	1/1:6,8:14:28.41:391,28,0	1/1:7,6:13:18.51:259,19,0	1/1:1,1:2:5.61:55,6,0
chr10	43308313	.	GAAGA	G	689.62	PASS	AB=0.955;AC=18;AF=0.321;AN=56;BaseQRankSum=7.331;DP=458;FS=2.241;HRun=0;HaplotypeScore=217.9654;InbreedingCoeff=-0.3571;MQ=49.88;MQ0=12;MQRankSum=-4.915;QD=3.38;ReadPosRankSum=-2.590;VQSLOD=2.4528;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:0.20:0,0,466	0/0:8,0:8:8.87:0,9,174	0/0:45,0:10:27.05:0,27,619	0/0:50,0:21:17.08:0,17,637	0/0:25,0:25:75.23:0,75,1912	0/0:17,0:17:39.13:0,39,904	0/0:24,0:24:38.20:0,38,1047	0/1:16,0:13:4.69:5,0,129	0/0:20,0:20:54.17:0,54,1230	0/1:11,0:11:43.86:44,0,44	0/1:10,1:10:46.28:46,0,90	0/1:9,2:10:38.78:103,0,39	0/1:9,1:10:41.62:42,0,56	0/1:14,0:15:85.95:109,0,86	0/1:18,0:18:19.38:19,0,115	0/1:13,0:13:42.75:43,0,60	0/0:33,0:32:89.49:0,89,2225	0/0:8,0:8:1.88:0,2,86	0/0:7,0:5:8.24:0,8,64	0/1:9,1:9:25.98:26,0,117	0/1:8,0:7:4.72:24,0,5	0/1:16,1:17:20.57:21,0,204	0/1:13,0:13:35.58:36,0,115	0/1:8,0:8:15.52:16,0,63	0/1:14,2:15:75.20:75,0,157	0/1:13,0:13:57.41:57,0,95	0/1:11,1:12:85.71:130,0,86	1/1:2,0:2:2.92:49,3,0
chr10	43308319	.	GA	G	376.61	PASS	AB=0.975;AC=24;AF=0.429;AN=56;BaseQRankSum=8.914;DP=412;FS=5.370;HRun=2;HaplotypeScore=168.7743;InbreedingCoeff=0.1535;MQ=57.02;MQ0=9;MQRankSum=-6.488;QD=2.35;ReadPosRankSum=0.088;VQSLOD=-0.4283;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:17.07:0,17,268	0/0:6,0:6:8.84:0,9,111	0/0:42,0:10:5.26:0,5,303	0/0:52,1:23:46.20:0,46,518	0/0:23,0:23:69.23:0,69,1028	0/0:17,0:17:42.14:0,42,624	0/0:23,0:22:53.46:0,53,733	0/1:6,3:9:5.70:74,0,6	0/0:23,0:23:60.20:0,60,894	0/1:11,0:11:15.23:15,0,31	1/1:10,0:9:1.39:19,1,0	1/1:9,0:8:4.16:50,4,0	0/1:6,0:6:11.62:12,0,12	0/1:14,0:14:37.91:52,0,38	0/0:13,0:13:1.76:0,2,11	0/1:10,0:10:16.45:16,0,17	0/0:31,0:30:65.33:0,65,1158	0/1:5,0:5:5:5,0,7	0/0:6,0:4:7.33:0,7,47	0/1:8,0:7:7.57:8,0,65	1/1:6,1:6:1.38:27,1,0	0/1:13,0:13:1.27:1,0,87	0/1:14,0:13:6.07:6,0,22	1/1:4,2:6:8.20:84,8,0	1/1:11,0:10:2.39:53,2,0	0/1:13,0:13:6.80:34,0,7	1/1:11,0:9:5.18:60,5,0	1/1:3,0:3:3.45:22,3,0
chr10	43308320	.	A	AGG	1637.93	PASS	AB=0.881;AC=21;AF=0.375;AN=56;BaseQRankSum=6.686;DP=414;FS=3.777;HRun=1;HaplotypeScore=171.0379;InbreedingCoeff=-0.3125;MQ=56.81;MQ0=9;MQRankSum=-4.727;QD=8.53;ReadPosRankSum=-0.353;VQSLOD=0.1778;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:14,0:14:10.94:11,0,226	0/0:6,0:6:9:0,9,119	0/0:41,0:10:9.38:0,9,326	0/0:51,0:23:46.85:0,47,508	0/0:23,0:23:69.23:0,69,1091	0/0:16,0:16:42.13:0,42,655	0/0:23,0:22:53.63:0,54,804	0/1:8,0:8:34.89:65,0,35	0/0:23,0:23:60.19:0,60,938	0/1:9,2:11:66.98:117,0,67	0/1:8,2:9:16.61:100,0,17	0/1:7,2:8:2.69:176,0,3	0/1:6,0:6:28.24:28,0,58	0/1:11,3:14:99:144,0,111	0/1:14,2:16:91.70:92,0,122	0/1:8,2:10:90.26:90,0,93	0/0:31,0:30:71.26:0,71,1220	1/1:5,0:5:0.34:4,0,0	0/0:6,0:4:11.64:0,12,65	0/1:7,1:7:40.65:41,0,94	0/1:4,3:6:11.94:103,0,12	0/1:13,0:13:22.52:23,0,144	0/1:12,2:13:29.50:120,0,30	1/1:3,3:6:9.32:215,9,0	0/1:9,2:10:25.89:169,0,26	0/1:11,2:13:38.86:136,0,39	0/1:11,1:10:53.95:112,0,54	0/1:4,1:5:10.50:54,0,11
chr10	43308325	.	G	GGAA	1491.22	PASS	AB=0.903;AC=26;AF=0.464;AN=56;BaseQRankSum=8.610;DP=404;FS=1.088;HRun=0;HaplotypeScore=167.7191;InbreedingCoeff=0.0502;MQ=57.27;MQ0=9;MQRankSum=-7.337;QD=7.93;ReadPosRankSum=0.937;VQSLOD=2.8683;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:13,0:13:35.93:99,0,36	0/0:6,0:6:6.01:0,6,73	0/0:38,0:9:12.61:0,13,85	0/0:52,0:22:2.69:0,3,150	0/0:24,0:24:66.11:0,66,880	0/0:15,0:15:35.60:0,36,547	0/0:23,0:22:45.10:0,45,606	0/1:8,0:7:6.57:7,0,7	0/0:23,0:23:54.06:0,54,743	0/1:8,2:10:8.05:167,0,8	0/1:7,2:8:1.30:74,0,1	1/1:8,2:9:6.81:158,7,0	0/1:6,0:6:24.63:25,0,39	0/1:10,3:13:40.19:118,0,40	0/1:14,2:15:51.72:73,0,52	0/1:8,2:10:41.32:87,0,41	0/0:31,0:30:55.93:0,56,972	1/1:4,0:4:5.55:28,6,0	0/0:3,0:1:0:0,0,0	0/1:7,1:7:4.72:52,0,5	1/1:4,2:5:4.57:61,5,0	0/1:13,0:13:9.80:51,0,10	1/1:11,2:12:5.10:126,5,0	1/1:5,1:6:6.12:47,6,0	1/1:9,2:10:0.43:142,0,0	1/1:12,2:13:6.69:201,7,0	0/1:12,1:11:22.05:101,0,22	0/1:4,1:5:6.52:39,0,7
chr10	43308333	.	AGGT	A	831.39	PASS	AB=0.940;AC=23;AF=0.411;AN=56;BaseQRankSum=5.651;DP=343;FS=2.572;HRun=0;HaplotypeScore=147.1055;InbreedingCoeff=-0.0061;MQ=63.09;MQ0=6;MQRankSum=-6.069;QD=4.20;ReadPosRankSum=-6.790;VQSLOD=-0.6009;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:9,1:10:20.20:20,0,37	0/0:4,0:4:3.01:0,3,41	0/0:26,0:9:7.85:0,8,86	0/1:47,0:19:7.50:7,0,227	0/0:20,0:20:35.05:0,35,651	0/0:14,0:14:35.56:0,36,468	0/0:20,0:19:40.84:0,41,495	1/1:10,0:9:18.02:116,18,0	0/0:18,0:18:48:0,48,590	0/1:9,0:9:11.08:11,0,48	0/1:9,0:8:15.48:15,0,18	0/1:9,2:9:4.53:81,0,5	1/1:6,0:6:12.43:64,12,0	0/1:10,0:10:2.02:60,0,2	0/1:13,0:12:12.70:46,0,13	0/1:5,1:6:9.24:60,0,9	0/0:29,0:28:64.88:0,65,829	1/1:2,0:2:5.98:56,6,0	1/1:1,0:1:2.98:21,3,0	0/1:6,0:5:14.77:28,0,15	0/0:4,0:3:2.79:0,3,26	1/1:9,1:10:20.53:122,21,0	0/1:11,1:11:18.31:60,0,18	0/0:5,0:5:2.76:0,3,22	0/1:8,2:9:12.22:84,0,12	0/1:15,0:14:34.75:66,0,35	0/1:9,2:9:16:82,0,16	0/0:4,0:4:2.04:0,2,6
chr10	43308346	.	GCA	G	74.31	PASS	AB=0.975;AC=12;AF=0.222;AN=54;BaseQRankSum=6.343;DP=306;FS=1.895;HRun=0;HaplotypeScore=117.6105;InbreedingCoeff=0.0098;MQ=70.53;MQ0=4;MQRankSum=-2.212;QD=0.97;ReadPosRankSum=-0.967;VQSLOD=2.3423;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,0:5:3.09:27,3,0	0/0:5,0:5:6.02:0,6,68	0/0:22,0:10:14.25:0,14,273	0/0:31,2:18:3.77:0,4,264	0/0:22,0:22:59.61:0,60,689	0/0:13,0:13:33.08:0,33,399	0/0:19,0:19:33.19:0,33,502	0/0:17,0:15:34.73:0,35,187	0/0:16,0:16:45.14:0,45,541	0/0:9,0:8:18.98:0,19,84	0/1:9,1:7:12.11:12,0,27	0/1:11,0:9:24.98:25,0,43	0/1:6,0:6:5.11:5,0,35	0/0:6,0:6:10.84:0,11,51	0/0:10,0:9:11.60:0,12,61	0/1:3,0:3:10.96:12,0,11	0/0:26,1:26:14.77:0,15,623	1/1:4,0:4:5.54:25,6,0	./.	0/0:5,0:4:7.19:0,7,25	0/0:2,1:2:2.98:0,3,22	0/1:7,1:7:21.80:59,0,22	0/1:13,0:11:6.69:7,0,38	0/0:3,0:3:2.99:0,3,23	0/1:7,0:6:26.25:26,0,28	0/0:11,0:9:21.95:0,22,105	0/1:10,0:8:15.16:15,0,23	0/0:4,0:4:2.50:0,2,9
chr10	43308351	.	GGAA	G	2838.84	PASS	AB=1.000;AC=37;AF=0.712;AN=52;BaseQRankSum=5.958;DP=312;FS=1.921;HRun=0;HaplotypeScore=108.9605;InbreedingCoeff=0.6898;MQ=66.56;MQ0=5;MQRankSum=-7.753;QD=15.51;ReadPosRankSum=1.832;VQSLOD=3.5251;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:4:1.36:2,1,0	0/0:6,0:6:8.89:0,9,100	0/0:24,0:8:24.05:0,24,333	0/1:33,0:17:10.42:10,0,100	0/0:22,0:22:60.21:0,60,1277	0/0:13,0:13:29.45:0,29,536	0/0:19,0:18:42.07:0,42,821	1/1:2,16:16:26.88:547,27,0	0/0:16,0:16:42.13:0,42,868	1/1:2,8:8:21.04:302,21,0	1/1:1,9:7:12.04:169,12,0	1/1:3,9:10:14.70:209,15,0	1/1:2,5:7:6.47:215,6,0	1/1:1,4:5:12.04:172,12,0	1/1:1,9:9:12.04:153,12,0	1/1:1,2:3:1.74:31,2,0	0/0:25,0:24:32.32:0,32,854	1/1:4,0:4:3.48:56,3,0	./.	1/1:0,5:4:9.03:134,9,0	./.	1/1:4,4:7:7.52:122,8,0	1/1:2,11:11:11.90:160,12,0	1/1:0,3:3:3:28,3,0	1/1:6,5:8:7.25:114,7,0	1/1:0,11:9:23.11:315,23,0	1/1:2,9:9:13.82:238,14,0	1/1:0,4:4:3.01:43,3,0
chr10	43308360	.	AG	A	125.52	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=4.195;DP=334;FS=5.940;HRun=2;HaplotypeScore=107.3243;InbreedingCoeff=0.5298;MQ=57.84;MQ0=7;MQRankSum=-3.114;QD=3.59;ReadPosRankSum=-2.809;VQSLOD=-0.7110;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:1,1:3:6.02:72,6,0	0/0:5,0:5:8.87:0,9,134	0/0:26,0:8:24.05:0,24,335	0/0:32,1:13:17.04:0,17,172	0/0:22,0:22:66.22:0,66,983	0/0:12,0:12:14.95:0,15,348	0/0:19,0:18:39.75:0,40,554	0/0:23,0:21:38.77:0,39,327	0/0:14,0:14:39.13:0,39,584	0/0:14,0:12:16.92:0,17,97	0/0:14,0:10:5.91:0,6,47	0/0:12,0:10:13.31:0,13,81	0/0:9,0:9:12.43:0,12,86	0/0:6,0:6:8.04:0,8,27	0/0:10,0:9:11.82:0,12,52	0/0:3,0:3:2.80:0,3,13	0/0:20,0:19:31.43:0,31,588	1/1:4,0:4:6.01:62,6,0	0/0:4,1:4:5.91:0,6,43	0/0:5,1:5:3.99:0,4,10	1/1:1,2:2:2.94:18,3,0	0/1:9,0:8:7.83:8,0,54	0/0:14,0:12:11.08:0,11,63	0/0:4,0:4:8.98:0,9,91	0/0:11,0:8:9.53:0,10,57	0/0:13,0:11:19.54:0,20,136	1/1:10,6:12:5.26:95,5,0	0/0:4,0:4:2.68:0,3,11
chr10	43308367	.	AGAG	A	2022.79	PASS	AB=0.994;AC=36;AF=0.643;AN=56;BaseQRankSum=5.482;DP=354;FS=3.295;HRun=0;HaplotypeScore=109.2257;InbreedingCoeff=0.4011;MQ=54.03;MQ0=7;MQRankSum=-9.028;QD=8.57;ReadPosRankSum=-0.301;VQSLOD=3.2426;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:6,0:6:7.77:47,8,0	0/0:5,0:5:8.92:0,9,88	0/0:21,0:7:2.97:0,3,27	0/1:25,0:10:3.71:4,0,31	0/0:22,0:22:65.77:0,66,767	0/0:12,0:12:21.03:0,21,181	0/0:19,0:18:41.03:0,41,328	1/1:26,0:23:62.64:472,63,0	0/0:17,0:17:44.82:0,45,365	1/1:10,5:13:35.85:314,36,0	1/1:14,2:12:23.62:197,24,0	0/1:13,0:11:44.60:53,0,45	1/1:9,0:9:20.86:193,21,0	1/1:6,0:6:11.78:74,12,0	1/1:10,0:9:11.80:74,12,0	0/1:4,0:4:7.02:12,0,7	0/0:22,0:21:38.31:0,38,316	1/1:3,0:3:2.92:17,3,0	1/1:5,0:4:5.96:44,6,0	1/1:6,0:5:10.45:63,10,0	1/1:3,0:2:2.97:20,3,0	0/1:13,0:12:21.30:58,0,21	0/1:15,0:13:14.14:79,0,14	0/1:7,0:7:29.84:30,0,37	1/1:7,4:8:11.86:100,12,0	1/1:22,0:18:1.20:226,1,0	1/1:16,0:12:17.47:113,17,0	1/1:4,0:4:2.98:21,3,0
chr10	43308373	.	G	GGAAGAA	672.68	PASS	AB=0.957;AC=24;AF=0.545;AN=44;BaseQRankSum=-0.034;DP=390;FS=18.825;HRun=0;HaplotypeScore=138.1292;InbreedingCoeff=-0.0660;MQ=48.53;MQ0=10;MQRankSum=-2.684;QD=2.78;ReadPosRankSum=-2.468;VQSLOD=1.1272;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:10,0:10:13.23:13,0,26	0/1:6,0:6:18.93:19,0,19	./.	./.	0/0:22,0:22:20.99:0,21,302	1/1:11,0:11:6.02:69,6,0	1/1:21,0:19:3.01:33,3,0	./.	1/1:18,0:18:6.70:45,7,0	0/1:20,0:17:25.57:26,0,73	0/0:18,0:14:4.49:0,4,22	0/1:14,0:12:14.12:14,0,30	0/1:11,0:11:12.26:12,0,18	./.	1/1:12,0:11:0.30:1,0,0	1/1:8,0:7:6.77:36,7,0	0/1:15,7:24:0:0,0,0	0/1:5,0:5:13.83:14,0,30	0/0:8,0:7:4.79:0,5,26	0/0:7,0:6:0.41:0,0,23	./.	0/1:17,0:16:11.64:103,0,12	0/1:17,0:15:10.48:13,0,10	0/1:5,0:6:12.17:32,0,12	0/0:13,0:10:2.50:0,2,9	1/1:22,0:19:7.82:317,8,0	1/1:18,0:14:8.82:59,9,0	./.
chr10	43308433	.	AGAAGAC	A	7956.95	PASS	AB=1.000;AC=34;AF=0.607;AN=56;BaseQRankSum=9.949;DP=687;FS=1.029;HRun=0;HaplotypeScore=190.9326;InbreedingCoeff=0.6885;MQ=53.50;MQ0=21;MQRankSum=-0.103;QD=16.41;ReadPosRankSum=2.553;VQSLOD=4.4239;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:67.95:0,68,731	0/0:11,0:11:29.78:0,30,297	0/0:23,0:14:25.48:0,25,280	0/0:18,0:15:14.01:0,14,224	0/0:37,0:37:99:0,104,1208	0/0:19,0:19:31.22:0,31,412	0/0:24,0:22:61.39:0,61,437	1/1:39,0:27:21.71:491,22,0	0/0:16,0:15:41.73:0,42,422	1/1:45,0:42:19.71:905,20,0	0/1:26,0:23:49.50:365,0,50	0/1:17,0:16:60.72:145,0,61	0/1:21,0:21:47.38:213,0,47	1/1:14,0:14:36.09:261,36,0	1/1:19,0:19:39.53:399,40,0	1/1:10,4:14:35.87:351,36,0	0/0:30,0:30:62.96:0,63,509	1/1:17,0:16:21.79:325,22,0	1/1:15,0:13:30.04:235,30,0	1/1:34,0:33:79.60:687,80,0	1/1:20,0:18:45.21:381,45,0	1/1:34,0:34:10.07:543,10,0	1/1:32,0:31:27.83:476,28,0	1/1:23,0:22:32.39:361,32,0	1/1:35,0:32:22.38:598,22,0	0/1:47,0:41:92.97:566,0,93	1/1:21,0:19:42.28:358,42,0	1/1:12,0:12:35.90:297,36,0
chr10	43308436	.	AGAC	A	9196.24	PASS	AB=0.938;AC=37;AF=0.661;AN=56;BaseQRankSum=14.030;DP=693;FS=2.790;HRun=0;HaplotypeScore=150.9466;InbreedingCoeff=0.9187;MQ=54.53;MQ0=16;MQRankSum=-3.862;QD=19.04;ReadPosRankSum=2.694;VQSLOD=4.4492;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:70.91:0,71,585	0/0:11,0:11:26.77:0,27,211	0/0:27,0:18:37.26:0,37,378	0/0:20,0:17:19.48:0,19,269	0/0:37,0:37:98.12:0,98,848	0/0:18,0:18:31.17:0,31,355	0/0:25,0:23:61.46:0,61,444	1/1:36,0:28:25.02:514,25,0	0/0:17,0:16:47.67:0,48,502	1/1:4,39:40:66.45:934,66,0	1/1:28,0:25:33.76:549,34,0	0/1:14,0:15:27.36:150,0,27	1/1:20,0:20:44.70:384,45,0	1/1:14,0:14:38.62:287,39,0	1/1:18,0:18:50.11:383,50,0	1/1:14,0:14:34.97:283,35,0	0/0:30,0:30:62.51:0,63,485	1/1:17,0:16:38.45:362,38,0	1/1:3,11:13:32.94:300,33,0	1/1:35,0:34:92.68:788,93,0	1/1:22,0:20:53.90:458,54,0	1/1:35,0:35:46.51:611,47,0	1/1:32,0:31:35.48:510,35,0	1/1:22,0:21:24.93:387,25,0	1/1:35,0:32:79.33:706,79,0	1/1:48,0:42:53.13:854,53,0	1/1:17,5:20:52.14:413,52,0	1/1:13,0:13:38.90:323,39,0
chr10	43308550	.	T	TC	2061.26	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.081;DP=684;FS=4.275;HRun=2;HaplotypeScore=74.7087;InbreedingCoeff=0.9988;MQ=83.82;MQ0=0;MQRankSum=-2.185;QD=37.48;ReadPosRankSum=2.920;VQSLOD=4.4480;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,54:55:99:2156,151,0	0/0:11,0:11:33.10:0,33,408	0/0:27,0:27:76.09:0,76,907	0/0:21,0:21:48.14:0,48,578	0/0:26,0:26:72.23:0,72,893	0/0:23,0:22:63.20:0,63,780	0/0:32,0:32:90.27:0,90,1102	0/0:27,0:27:69.21:0,69,855	0/0:21,0:21:57.17:0,57,694	0/0:35,0:34:87.27:0,87,1076	0/0:18,0:18:42.12:0,42,507	0/0:18,0:17:39.12:0,39,483	0/0:19,0:19:48.15:0,48,595	0/0:14,0:14:39.12:0,39,480	0/0:20,0:20:54.17:0,54,669	0/0:13,0:13:33.08:0,33,385	0/0:36,0:36:99:0,105,1285	0/0:16,0:16:45.10:0,45,541	0/0:25,0:25:72.22:0,72,883	0/0:27,0:27:63.19:0,63,768	0/0:30,0:30:84.26:0,84,1041	0/0:28,0:28:81.25:0,81,1004	0/0:23,0:23:63.17:0,63,755	0/0:30,0:30:84.25:0,84,1027	0/0:23,0:22:66.21:0,66,818	0/0:31,0:30:87.27:0,87,1078	0/0:25,0:23:57.16:0,57,694	0/0:10,0:10:30.09:0,30,372
chr10	43308900	.	AAGAAGG	A	9759.34	PASS	AB=1.000;AC=32;AF=0.571;AN=56;BaseQRankSum=13.755;DP=699;FS=59.445;HRun=0;HaplotypeScore=256.8524;InbreedingCoeff=0.4851;MQ=40.61;MQ0=18;MQRankSum=-13.379;QD=21.98;ReadPosRankSum=0.937;VQSLOD=2.4125;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:35,0:35:99:166,0,261	0/0:10,0:10:27.09:0,27,861	0/0:34,0:12:36.12:0,36,955	0/0:30,0:15:30.98:0,31,814	0/0:35,0:33:51.34:0,51,2522	0/0:27,0:27:69.22:0,69,2183	0/0:40,0:39:73.56:0,74,3361	0/1:8,0:7:33.92:97,0,34	0/0:37,0:37:99:0,102,3056	0/1:46,0:43:3.89:1136,0,4	0/1:19,0:19:9.20:346,0,9	1/1:25,1:23:57.05:903,57,0	1/1:24,0:21:27.50:785,27,0	1/1:12,1:11:29.87:402,30,0	0/1:27,0:24:25.79:521,0,26	1/1:36,0:32:11.94:900,12,0	0/0:42,0:41:99:0,114,3528	1/1:17,0:17:20.47:352,20,0	0/1:17,0:13:99:160,0,104	1/1:31,0:23:62.19:698,62,0	1/1:24,0:15:18.94:225,19,0	1/1:11,4:13:35.98:604,36,0	1/1:18,5:16:38.63:579,39,0	1/1:24,1:23:29.47:426,29,0	1/1:18,0:15:38.11:463,38,0	0/1:21,0:18:2.71:571,0,3	1/1:15,0:14:32.05:384,32,0	0/1:4,0:3:2.43:41,0,2
chr10	43308901	.	A	AG	8467.83	PASS	AB=0.842;AC=37;AF=0.661;AN=56;BaseQRankSum=13.976;DP=697;FS=56.725;HRun=1;HaplotypeScore=217.5810;InbreedingCoeff=0.7425;MQ=40.17;MQ0=19;MQRankSum=-13.392;QD=19.11;ReadPosRankSum=0.250;VQSLOD=1.0711;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:33,3:35:24.16:99,0,24	0/0:9,0:9:27.09:0,27,349	0/0:34,0:12:36.11:0,36,460	0/0:31,0:15:30.77:0,31,391	0/0:34,0:33:52.87:0,53,1003	0/0:27,0:27:69.21:0,69,881	0/0:37,1:38:80.75:0,81,1289	0/1:7,1:7:6.97:89,0,7	0/0:38,0:36:99:0,99,1239	1/1:14,31:42:83.75:1098,84,0	1/1:9,9:18:6.26:402,6,0	1/1:19,7:23:56.98:593,57,0	1/1:19,7:23:34.72:486,35,0	1/1:10,4:12:22.77:235,23,0	1/1:8,18:23:44.02:630,44,0	1/1:9,26:32:64.65:918,65,0	0/0:40,1:40:99:0,114,1420	1/1:10,7:17:35.88:371,36,0	0/1:9,6:12:29.14:236,0,29	1/1:7,24:23:62.57:647,63,0	1/1:17,7:15:22.27:264,22,0	1/1:15,0:13:34.48:295,34,0	1/1:16,7:16:39.05:449,39,0	1/1:18,5:22:28.33:355,28,0	1/1:7,12:16:44.77:471,45,0	1/1:10,12:19:23.83:442,24,0	1/1:3,11:13:32.39:310,32,0	1/1:2,2:3:5.68:77,6,0
chr10	43308902	.	GAA	G	6781.93	PASS	AB=0.859;AC=30;AF=0.536;AN=56;BaseQRankSum=15.753;DP=690;FS=63.519;HRun=2;HaplotypeScore=227.3303;InbreedingCoeff=0.2791;MQ=38.95;MQ0=21;MQRankSum=-13.495;QD=15.59;ReadPosRankSum=2.223;VQSLOD=0.3384;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:19,18:35:99:720,0,114	0/0:10,0:10:30.09:0,30,574	0/0:32,1:12:36.12:0,36,729	0/0:29,0:13:15.12:0,15,633	0/0:34,1:33:45.05:0,45,1621	0/0:28,0:28:75.25:0,75,1452	0/0:39,0:38:96.64:0,97,2118	0/1:6,2:7:32.40:94,0,32	0/0:39,0:37:99:0,102,2005	0/1:39,6:42:21.23:511,0,21	0/1:15,1:18:43.56:201,0,44	1/1:12,13:22:56.79:713,57,0	0/1:13,12:22:13.26:552,0,13	1/1:7,7:12:15.62:343,16,0	0/1:24,2:23:31.10:260,0,31	0/1:32,3:31:9.04:597,0,9	0/0:40,0:39:99:0,114,2252	1/1:16,0:16:28.50:200,29,0	0/1:12,0:10:91.63:92,0,123	1/1:30,1:24:52.84:415,53,0	0/1:21,2:14:9.53:72,0,10	1/1:6,8:12:35.61:410,36,0	1/1:16,6:16:33.66:397,34,0	1/1:17,6:22:32.37:323,32,0	1/1:18,1:16:21.67:322,22,0	0/1:18,4:19:41.98:307,0,42	1/1:12,1:12:24.91:224,25,0	1/1:4,0:3:5.12:29,5,0
chr10	43308904	.	A	AG	4432.58	PASS	AB=0.834;AC=32;AF=0.571;AN=56;BaseQRankSum=14.799;DP=669;FS=51.584;HRun=2;HaplotypeScore=225.8916;InbreedingCoeff=0.3601;MQ=38.55;MQ0=23;MQRankSum=-13.358;QD=10.63;ReadPosRankSum=2.277;VQSLOD=0.8114;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:32,0:29:44.39:44,0,133	0/0:10,0:10:30.09:0,30,361	0/0:35,0:12:36.10:0,36,431	0/0:29,0:12:27.05:0,27,324	0/0:36,0:34:22.95:0,23,890	0/0:26,0:26:72.20:0,72,866	0/0:37,0:37:97.46:0,97,1263	0/1:7,1:7:26.23:77,0,26	0/0:38,0:36:93.26:0,93,1135	1/1:15,27:39:15.93:845,16,0	0/1:7,8:16:17.45:275,0,17	1/1:24,0:21:25.48:123,25,0	0/1:23,0:21:36.58:124,0,37	0/1:14,0:12:22.95:89,0,23	0/1:14,10:22:17.59:315,0,18	1/1:14,20:30:11.34:578,11,0	0/0:40,0:39:99:0,99,1224	1/1:7,7:15:13.40:202,13,0	0/1:8,4:9:89.68:111,0,90	1/1:8,23:23:49.81:479,50,0	1/1:15,6:13:2.49:8,2,0	1/1:14,0:12:8.32:72,8,0	1/1:24,0:16:13.97:96,14,0	1/1:22,0:20:20.02:138,20,0	1/1:10,9:16:21.29:291,21,0	0/1:12,10:19:60.20:284,0,60	1/1:5,9:13:30.43:240,30,0	1/1:3,1:3:4.98:40,5,0
chr10	43308905	.	GGA	G	1921.14	PASS	AB=0.987;AC=22;AF=0.393;AN=56;BaseQRankSum=10.163;DP=658;FS=62.511;HRun=0;HaplotypeScore=235.4897;InbreedingCoeff=-0.0627;MQ=38.46;MQ0=23;MQRankSum=-11.356;QD=5.28;ReadPosRankSum=0.491;VQSLOD=1.1509;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:28:24.06:0,24,405	0/0:10,0:10:30.10:0,30,560	0/0:36,0:12:36.10:0,36,614	0/0:28,0:11:27.08:0,27,467	0/0:36,0:34:89.67:0,90,1581	0/0:26,0:26:72.23:0,72,1325	0/0:38,0:37:83.70:0,84,2000	0/1:8,0:7:10.10:10,0,71	0/0:39,0:38:99:0,99,1867	0/1:41,1:39:62.87:63,0,398	0/1:15,1:16:72.63:73,0,106	1/1:22,0:19:43.51:400,44,0	0/1:24,0:21:69.36:283,0,69	0/1:14,0:12:51.58:162,0,52	0/1:24,0:22:34.49:34,0,184	0/1:34,0:30:99:172,0,130	0/0:37,0:36:99:0,102,1942	0/1:13,0:13:34.21:34,0,62	0/0:12,0:9:0.93:0,1,172	0/1:30,0:22:42.04:70,0,42	0/1:23,0:14:15.98:16,0,29	1/1:14,0:12:19.88:210,20,0	1/1:23,1:16:30.36:224,30,0	1/1:17,1:16:9.76:118,10,0	0/1:17,2:16:99:130,0,132	0/1:22,0:19:50.97:51,0,183	0/1:13,0:12:45.40:45,0,45	0/1:4,0:3:4.95:5,0,19
chr10	43308916	.	GGAGGAAA	G	6262.74	PASS	AB=0.945;AC=28;AF=0.500;AN=56;BaseQRankSum=14.897;DP=612;FS=68.769;HRun=0;HaplotypeScore=260.6984;InbreedingCoeff=-0.0003;MQ=40.02;MQ0=23;MQRankSum=-13.600;QD=16.18;ReadPosRankSum=4.527;VQSLOD=1.9380;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:38,0:33:81.99:82,0,312	0/0:10,0:10:27.09:0,27,853	0/0:29,0:10:30.10:0,30,666	0/1:30,0:10:0.79:1,0,434	0/0:33,0:31:64.81:0,65,2860	0/0:22,0:22:60.21:0,60,2158	0/0:42,0:41:57.79:0,58,3519	1/1:9,0:6:0.26:75,0,0	0/0:43,0:40:99:0,114,3283	1/1:29,7:35:4.03:996,4,0	0/1:12,3:15:33.06:272,0,33	1/1:20,0:18:40.29:412,40,0	0/1:19,0:18:89.54:369,0,90	0/1:11,0:10:48.14:235,0,48	0/1:18,1:17:82.90:346,0,83	0/1:27,7:29:67.19:695,0,67	0/0:46,0:45:99:0,125,4279	0/1:11,0:10:22.20:101,0,22	0/1:10,0:6:35.72:36,0,91	1/1:14,4:17:20.83:413,21,0	1/1:20,0:12:19.21:190,19,0	1/1:16,0:14:3.96:438,4,0	0/1:17,0:12:28.51:288,0,29	0/1:14,0:13:28.81:135,0,29	0/1:10,3:13:99:285,0,112	0/1:18,6:20:99:585,0,109	1/1:8,3:11:22.46:310,22,0	0/1:2,0:1:0:0,0,0
chr10	43308928	.	GA	G	3447.97	PASS	AB=0.867;AC=20;AF=0.370;AN=54;BaseQRankSum=11.996;DP=615;FS=84.607;HRun=2;HaplotypeScore=215.1747;InbreedingCoeff=-0.4360;MQ=39.71;MQ0=23;MQRankSum=-11.869;QD=9.71;ReadPosRankSum=4.102;VQSLOD=0.0477;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:26,12:32:99:371,0,232	0/0:10,0:10:27.08:0,27,385	0/0:24,0:7:21.02:0,21,259	0/0:26,0:8:23.41:0,23,297	0/0:34,0:32:90.28:0,90,1281	0/0:23,0:22:60.19:0,60,876	0/0:44,0:42:99:0,113,1635	0/1:18,0:9:19.11:19,0,45	0/0:44,0:41:99:0,108,1587	0/1:27,7:32:84.86:414,0,85	0/1:10,2:12:41.44:141,0,41	0/1:17,3:17:6.97:260,0,7	0/1:17,2:18:96.62:148,0,97	0/1:11,2:10:99:100,0,109	0/1:14,9:20:55.06:349,0,55	0/1:23,7:25:99:458,0,145	0/0:55,0:53:99:0,126,2038	0/1:8,2:8:26.81:27,0,122	0/1:9,1:7:27.30:27,0,100	1/1:9,3:12:1.73:252,2,0	0/1:26,0:16:1.87:2,0,162	0/1:15,1:14:99:112,0,100	0/1:11,2:12:78:131,0,78	0/1:11,1:12:36.16:36,0,102	0/1:10,3:13:99:168,0,138	0/1:21,4:21:99:289,0,100	0/1:9,2:11:34.14:145,0,34	./.
chr10	43308930	.	AG	A	2641.71	PASS	AB=0.849;AC=18;AF=0.333;AN=54;BaseQRankSum=13.102;DP=618;FS=123.789;HRun=2;HaplotypeScore=225.9369;InbreedingCoeff=-0.2282;MQ=39.58;MQ0=24;MQRankSum=-11.791;QD=8.89;ReadPosRankSum=4.726;VQSLOD=0.1214;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:39,0:33:99:159,0,257	0/0:11,0:11:27.09:0,27,400	0/0:24,0:7:15.05:0,15,211	0/0:27,0:8:23.96:0,24,311	0/0:35,0:33:87.26:0,87,1257	0/0:22,0:21:57.18:0,57,831	0/0:42,0:40:99:0,114,1588	0/0:20,0:10:11.09:0,11,107	0/0:43,0:40:99:0,105,1526	0/1:25,7:30:99:318,0,102	0/1:8,3:11:51.64:107,0,52	0/1:10,9:16:40.64:351,0,41	0/1:15,6:19:99:235,0,107	0/1:10,2:9:92.16:101,0,92	0/1:20,1:18:52.80:177,0,53	0/1:22,7:24:99:334,0,113	0/0:57,0:55:99:0,123,1989	0/1:12,0:10:1.17:1,0,136	0/0:10,0:7:1.39:0,1,142	1/1:7,4:11:4.60:179,5,0	0/0:29,0:18:8.39:0,8,170	0/1:13,4:14:79.31:148,0,79	0/1:9,2:10:72.43:101,0,72	0/1:13,1:14:49.64:50,0,110	0/1:10,3:13:99:136,0,120	0/1:19,6:21:72.62:235,0,73	1/1:7,3:10:6.80:169,7,0	./.
chr10	43308966	.	G	GA	696.16	PASS	AB=0.927;AC=14;AF=0.259;AN=54;BaseQRankSum=5.519;DP=533;FS=7.738;HRun=1;HaplotypeScore=171.9899;InbreedingCoeff=-0.3185;MQ=39.93;MQ0=20;MQRankSum=-8.301;QD=2.89;ReadPosRankSum=-0.278;VQSLOD=-0.6770;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:39,2:36:30.06:30,0,665	0/0:16,0:15:42.09:0,42,488	0/0:13,0:4:5.95:0,6,57	0/0:16,0:6:9.02:0,9,101	0/0:5,0:25:63.32:0,63,484	0/0:20,0:19:48.16:0,48,622	0/0:32,0:27:78.17:0,78,971	0/1:17,3:9:70.78:71,0,131	0/0:43,0:38:96.31:0,96,1237	0/0:21,1:17:24.58:0,25,220	0/0:6,0:6:8.53:0,9,77	0/1:16,0:11:17.15:17,0,191	0/1:14,0:11:20.16:20,0,155	0/1:14,1:10:49.54:50,0,149	0/1:18,1:14:17.56:18,0,129	0/0:20,0:16:11.84:0,12,172	0/0:57,2:57:55.68:0,56,1778	0/1:8,4:9:93.22:114,0,93	0/1:9,2:6:9.58:81,0,10	0/1:10,0:8:26.37:26,0,68	0/1:27,7:21:15.75:250,0,16	0/0:9,0:7:20.70:0,21,179	0/1:11,0:10:48.06:48,0,181	0/1:9,2:10:69.28:113,0,69	0/0:10,0:8:18.24:0,18,128	0/1:23,0:21:3.49:3,0,247	0/1:4,0:4:1.56:2,0,14	./.
chr10	43308987	.	AGAAAGGAG	A	994.65	PASS	AB=1.000;AC=25;AF=0.463;AN=54;BaseQRankSum=9.178;DP=398;FS=2.206;HRun=0;HaplotypeScore=142.3194;InbreedingCoeff=0.4750;MQ=45.30;MQ0=9;MQRankSum=-7.922;QD=7.10;ReadPosRankSum=-1.013;VQSLOD=2.5256;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:40,0:35:75.32:75,0,849	0/0:9,0:8:21.07:0,21,924	0/0:26,0:10:23.41:0,23,516	0/0:19,0:7:14.18:0,14,248	0/0:26,0:25:59.21:0,59,958	0/0:20,0:19:53.92:0,54,1852	0/0:36,0:33:90.28:0,90,2136	0/0:7,0:5:1.92:0,2,17	0/0:42,0:39:99:0,105,3387	0/1:12,0:8:12.95:16,0,13	0/0:3,0:3:5:0,5,26	0/1:7,0:5:4.68:112,0,5	1/1:10,0:8:10.64:102,11,0	1/1:4,0:4:8.98:142,9,0	1/1:7,1:6:7.60:92,8,0	1/1:6,0:4:2.62:51,3,0	0/0:54,0:53:99:0,138,5026	0/0:8,1:7:5.91:0,6,39	0/0:2,0:2:2.87:0,3,18	1/1:2,0:2:2.88:15,3,0	1/1:18,3:11:16.10:214,16,0	1/1:3,0:3:2.96:19,3,0	1/1:6,0:6:13.79:212,14,0	1/1:5,0:4:6.02:73,6,0	1/1:5,0:3:3.01:40,3,0	0/1:10,0:9:7.42:7,0,17	0/1:1,0:1:0:0,0,0	./.
chr10	43308999	.	AAGAG	A	603.02	PASS	AB=0.833;AC=25;AF=0.481;AN=52;BaseQRankSum=8.702;DP=322;FS=7.604;HRun=0;HaplotypeScore=89.9598;InbreedingCoeff=0.5468;MQ=49.88;MQ0=9;MQRankSum=-7.225;QD=10.58;ReadPosRankSum=0.610;VQSLOD=1.8046;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:31:35.98:0,36,1735	0/0:10,0:9:27.09:0,27,745	0/0:33,0:11:33.09:0,33,790	0/0:24,0:7:21.07:0,21,472	0/0:18,0:18:54.10:0,54,1409	0/0:20,0:18:51.09:0,51,1245	0/0:32,0:28:84.27:0,84,2181	0/0:2,0:2:2.96:0,3,19	0/0:38,0:36:99:0,99,2678	1/1:6,0:4:8.16:47,8,0	1/1:1,0:1:2.80:13,3,0	0/1:4,1:4:2.68:82,0,3	1/1:5,1:4:8.54:74,9,0	1/1:2,1:3:8.95:97,9,0	1/1:2,1:3:1.50:43,1,0	1/1:2,0:1:2.92:17,3,0	0/0:48,0:48:99:0,135,3678	0/0:3,1:3:4.23:0,4,25	./.	1/1:1,0:1:1.25:3,1,0	1/1:12,4:7:17.66:144,18,0	0/0:1,0:1:2.80:0,3,13	1/1:2,2:4:12:154,12,0	0/1:1,1:2:11.47:27,0,11	1/1:2,0:1:3.01:38,3,0	0/1:5,0:5:5.98:15,0,6	1/1:1,0:1:2.98:21,3,0	./.
chr10	43309057	.	AAGGG	A	860.06	PASS	AB=0.933;AC=11;AF=0.196;AN=56;BaseQRankSum=3.547;DP=532;FS=10.430;HRun=0;HaplotypeScore=123.1407;InbreedingCoeff=-0.0639;MQ=31.48;MQ0=55;MQRankSum=-2.286;QD=4.55;ReadPosRankSum=-1.072;VQSLOD=1.4310;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:26,4:22:99:295,0,151	0/0:16,0:14:38.96:0,39,658	0/0:18,0:2:3.01:0,3,66	0/0:28,0:6:5.14:0,5,105	0/0:20,0:19:47.53:0,48,1085	0/0:14,0:13:29.94:0,30,618	0/0:36,0:27:9.74:0,10,1035	0/0:27,0:11:17.98:0,18,292	0/0:23,0:19:33.07:0,33,707	0/0:26,0:19:24.10:0,24,354	0/0:10,0:9:17.67:0,18,155	0/0:16,0:10:20.65:0,21,257	0/0:18,0:11:10.67:0,11,157	0/1:18,1:11:28.25:28,0,237	0/1:14,1:13:32.01:32,0,129	0/1:18,1:12:32.30:32,0,171	0/0:38,0:30:74.97:0,75,1394	0/1:13,1:8:31.97:32,0,102	0/1:22,1:8:19.80:20,0,98	0/0:13,0:12:2.52:0,3,165	0/1:28,0:17:7.68:8,0,150	1/1:10,3:7:17.24:205,17,0	0/1:13,5:15:10.98:302,0,11	0/1:10,0:8:14.62:54,0,15	0/0:21,0:16:35.75:0,36,358	0/0:13,0:11:24.01:0,24,310	0/0:3,0:3:9.02:0,9,106	0/0:2,0:2:3:0,3,25
chr10	43309130	.	AAGG	A	1004.30	PASS	AB=0.977;AC=15;AF=0.278;AN=54;BaseQRankSum=5.741;DP=583;FS=7.886;HRun=0;HaplotypeScore=146.9417;InbreedingCoeff=-0.2893;MQ=32.43;MQ0=56;MQRankSum=-5.718;QD=3.31;ReadPosRankSum=-3.959;VQSLOD=0.8471;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:20,1:12:99:183,0,185	0/0:9,0:9:18.52:0,19,226	0/0:13,0:2:3.01:0,3,39	./.	0/0:30,0:27:56.74:0,57,890	0/0:21,0:20:40.81:0,41,544	0/0:53,2:49:75.64:0,76,983	0/0:36,0:13:23.47:0,23,198	0/0:46,0:38:66.18:0,66,838	0/1:35,0:24:99:107,0,242	0/1:25,0:25:99:191,0,201	0/0:12,0:8:8.99:0,9,96	0/0:16,0:7:4.26:0,4,56	0/1:12,1:8:20.24:20,0,87	0/1:11,0:5:10.41:22,0,10	1/1:14,0:9:2.38:12,2,0	0/1:29,1:23:39.06:39,0,494	0/0:13,0:8:6.86:0,7,56	0/0:12,0:3:6.01:0,6,57	0/1:24,0:23:99:291,0,106	0/1:31,0:19:52.76:53,0,82	0/1:14,2:15:60.08:60,0,209	0/1:22,1:21:21.77:22,0,192	0/0:6,0:5:8.04:0,8,63	0/1:25,0:20:40.99:41,0,205	0/1:24,0:19:6.23:6,0,303	0/0:4,0:3:8.99:0,9,83	0/1:11,0:10:97.61:106,0,98
chr10	43309142	.	AG	A	1615.56	PASS	AB=0.838;AC=11;AF=0.212;AN=52;BaseQRankSum=5.739;DP=553;FS=2.144;HRun=2;HaplotypeScore=142.4878;InbreedingCoeff=-0.3441;MQ=33.81;MQ0=48;MQRankSum=-5.640;QD=6.70;ReadPosRankSum=-1.451;VQSLOD=0.3199;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:18:29.70:0,30,512	0/0:9,0:9:21.97:0,22,217	./.	./.	0/0:30,0:28:64.81:0,65,885	0/0:17,0:17:34.56:0,35,443	0/0:53,1:50:45.08:0,45,1162	0/1:34,2:16:94.87:95,0,147	0/0:37,2:32:51.10:0,51,613	0/1:23,10:24:99:248,0,227	0/1:16,9:25:99:292,0,174	0/0:9,0:6:5.88:0,6,48	0/0:14,1:8:8.39:0,8,43	0/0:15,0:9:0.96:0,1,77	0/1:7,1:5:19.04:19,0,28	0/0:15,0:11:1.50:0,1,28	0/0:30,1:23:52.29:0,52,712	0/1:14,0:9:23.81:24,0,78	0/1:11,1:6:44.05:44,0,65	0/1:15,16:30:99:496,0,103	0/0:21,0:13:2.80:0,3,128	0/0:16,0:15:3.07:0,3,173	0/1:23,0:21:20.58:21,0,146	0/0:6,0:5:2.29:0,2,24	0/1:19,7:21:99:228,0,194	0/1:18,3:17:80.36:80,0,241	0/0:3,0:3:8.86:0,9,78	0/1:5,7:12:86.64:205,0,87
chr10	43309144	.	GA	G	919.74	PASS	AB=0.977;AC=17;AF=0.327;AN=52;BaseQRankSum=7.785;DP=565;FS=8.597;HRun=2;HaplotypeScore=142.2647;InbreedingCoeff=-0.2194;MQ=33.94;MQ0=48;MQRankSum=-6.460;QD=3.02;ReadPosRankSum=-0.515;VQSLOD=-0.6060;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,2:20:37.45:0,37,530	0/0:9,0:9:14.74:0,15,201	./.	./.	0/0:29,0:27:45.78:0,46,876	0/0:17,0:17:15.95:0,16,386	0/0:53,0:49:20.44:0,20,1024	0/1:37,1:18:60.04:60,0,128	0/0:38,1:33:50.34:0,50,615	0/1:34,0:25:99:103,0,196	0/1:25,0:25:99:139,0,183	0/0:9,0:6:1.17:0,1,40	1/1:15,0:8:2.32:11,2,0	0/1:15,0:9:7.15:7,0,42	1/1:6,0:3:3.79:18,4,0	0/0:16,0:12:5.54:0,6,25	0/0:31,0:23:54.14:0,54,724	0/0:15,1:11:9.77:0,10,87	0/1:12,0:6:18.44:18,0,79	0/1:33,0:32:99:223,0,109	0/1:17,2:12:27:27,0,38	0/1:16,0:15:72.13:76,0,72	0/1:23,0:21:32.01:141,0,32	0/1:5,1:5:1.49:7,0,1	0/1:29,1:25:99:101,0,186	0/1:21,0:17:54.43:54,0,129	0/0:4,0:4:2.48:0,2,43	0/1:12,0:12:76.83:80,0,77
chr10	43309146	.	AG	A	1489.34	PASS	AB=0.949;AC=21;AF=0.389;AN=54;BaseQRankSum=9.710;DP=556;FS=6.176;HRun=2;HaplotypeScore=144.6289;InbreedingCoeff=-0.1193;MQ=34.18;MQ0=47;MQRankSum=-7.373;QD=4.68;ReadPosRankSum=3.131;VQSLOD=0.7328;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:21:50.48:0,50,571	0/0:9,0:9:16.03:0,16,204	./.	0/0:5,0:2:3.01:0,3,32	0/0:27,0:25:62.12:0,62,893	0/0:16,0:16:14.77:0,15,370	0/0:49,0:45:44.24:0,44,1002	0/1:38,2:20:59.31:59,0,258	0/0:38,0:32:57.03:0,57,664	0/1:32,2:25:99:117,0,202	0/1:24,2:26:99:149,0,151	0/1:8,1:6:14.86:15,0,37	1/1:15,0:8:8.86:66,9,0	0/1:13,2:9:32.37:32,0,33	1/1:5,0:3:5.99:57,6,0	0/0:15,0:12:2.69:0,3,8	0/0:31,0:23:52.03:0,52,717	0/0:17,0:12:4.57:0,5,141	0/1:11,1:6:35.53:36,0,58	0/1:31,0:31:99:232,0,101	0/1:21,0:14:15.30:15,0,35	0/1:12,4:15:42.80:277,0,43	1/1:19,4:21:29.70:402,30,0	1/1:6,0:5:3.04:11,3,0	0/1:30,0:25:33.98:34,0,202	0/1:19,0:15:67.19:67,0,88	0/1:4,0:4:8.88:9,0,69	0/1:12,0:12:75.99:76,0,85
chr10	43309147	.	G	GGAA	3510.05	PASS	AB=0.997;AC=30;AF=0.556;AN=54;BaseQRankSum=8.126;DP=564;FS=1.375;HRun=0;HaplotypeScore=158.0479;InbreedingCoeff=-0.3135;MQ=34.58;MQ0=46;MQRankSum=-6.759;QD=7.28;ReadPosRankSum=5.832;VQSLOD=2.7356;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:23:41.69:0,42,461	0/1:9,0:9:55.83:56,0,155	./.	0/0:5,0:2:3.01:0,3,32	0/0:27,0:25:62.69:0,63,896	0/1:17,0:17:59.14:59,0,250	0/1:49,0:45:20.11:20,0,753	0/1:39,0:20:74.77:75,0,130	0/1:39,0:33:45.93:46,0,458	0/1:34,0:26:46.92:226,0,47	0/1:26,0:26:50.91:352,0,51	0/1:8,0:5:12.85:13,0,37	1/1:13,2:8:8.95:104,9,0	0/1:16,0:11:25.03:101,0,25	1/1:7,0:5:5.97:57,6,0	1/1:15,0:12:2.98:21,3,0	0/1:32,0:24:3.78:4,0,445	0/0:17,0:12:5.57:0,6,143	0/1:12,0:6:34.96:36,0,35	0/1:31,0:31:84.67:414,0,85	1/1:21,0:14:9.77:76,10,0	1/1:9,8:16:0.60:680,1,0	1/1:13,10:21:28.48:741,28,0	1/1:5,1:5:3.01:64,3,0	0/1:30,0:25:99:107,0,114	0/1:18,0:14:43.36:114,0,43	0/1:4,0:4:11.74:12,0,28	0/1:12,0:12:49.97:134,0,50
chr10	43309148	.	GA	G	1346.96	PASS	AB=0.884;AC=24;AF=0.444;AN=54;BaseQRankSum=9.533;DP=569;FS=3.306;HRun=2;HaplotypeScore=149.1361;InbreedingCoeff=-0.2902;MQ=35.07;MQ0=44;MQRankSum=-6.224;QD=3.72;ReadPosRankSum=6.054;VQSLOD=0.6670;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:24:54.01:0,54,616	0/1:9,0:9:15.65:16,0,180	./.	0/0:6,0:2:3.01:0,3,37	0/0:29,0:27:65.62:0,66,894	0/0:15,1:16:0.01:0,0,368	0/0:48,3:47:26.07:0,26,1022	0/1:35,2:20:89.92:90,0,264	0/0:40,0:34:60.14:0,60,743	0/1:28,6:26:87.09:87,0,223	0/1:19,1:26:99:112,0,120	0/1:7,1:5:32.76:33,0,37	1/1:13,2:8:8.92:88,9,0	0/1:13,4:11:31.31:41,0,31	0/1:7,1:6:13.66:47,0,14	1/1:8,2:12:5.62:29,6,0	0/0:31,1:25:52.30:0,52,749	0/1:14,3:13:14.77:15,0,200	0/1:12,0:6:12.70:13,0,82	0/1:22,1:31:91.96:92,0,171	0/1:18,3:14:12.93:70,0,13	0/1:17,0:16:22.34:179,0,22	1/1:21,3:21:34.33:319,34,0	1/1:5,1:5:4.16:21,4,0	0/1:29,0:25:53.68:54,0,269	0/1:13,5:14:85.82:132,0,86	0/1:3,1:4:26.84:27,0,56	0/1:11,1:12:45.92:46,0,125
chr10	43309150	.	AG	A	1184.71	PASS	AB=0.983;AC=22;AF=0.407;AN=54;BaseQRankSum=8.478;DP=571;FS=5.617;HRun=2;HaplotypeScore=150.7886;InbreedingCoeff=-0.1551;MQ=35.43;MQ0=43;MQRankSum=-7.952;QD=3.53;ReadPosRankSum=6.066;VQSLOD=0.5201;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:24:54.48:0,54,684	0/0:10,0:10:4.17:0,4,212	./.	0/0:6,0:2:3.01:0,3,41	0/0:27,0:25:68.85:0,69,923	0/0:17,0:17:18.29:0,18,409	0/0:50,0:46:47.68:0,48,1104	0/1:35,0:19:39.95:40,0,202	0/0:41,0:35:66.11:0,66,814	0/1:38,0:30:48.42:48,0,219	0/1:25,1:26:64.78:65,0,98	0/1:8,0:5:12.86:13,0,37	1/1:13,0:8:8.95:77,9,0	0/1:15,1:11:50.26:50,0,68	0/1:8,0:6:10.98:11,0,43	1/1:16,0:12:5.19:28,5,0	0/0:33,0:26:18.49:0,18,726	0/0:17,0:12:7.06:0,7,186	0/1:10,2:6:26.99:27,0,63	0/1:31,0:31:41.27:41,0,147	0/1:21,0:14:6.16:46,0,6	0/1:17,0:16:20.17:335,0,20	1/1:24,0:20:27.21:387,27,0	1/1:5,1:5:2.99:36,3,0	0/1:31,0:26:27.65:28,0,243	0/1:17,0:14:69.68:83,0,70	0/1:4,0:4:13.16:13,0,20	0/1:12,0:12:21.49:21,0,88
chr10	43309154	.	AG	A	2324.89	PASS	AB=0.983;AC=27;AF=0.500;AN=54;BaseQRankSum=10.092;DP=568;FS=0.395;HRun=2;HaplotypeScore=143.6848;InbreedingCoeff=0.5524;MQ=36.50;MQ0=38;MQRankSum=-8.209;QD=7.62;ReadPosRankSum=2.721;VQSLOD=1.0902;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:27:62.83:0,63,814	0/0:13,0:13:14.11:0,14,299	./.	0/0:8,0:4:11.26:0,11,93	0/0:29,0:27:78.67:0,79,1082	0/0:18,0:18:21.85:0,22,435	0/0:46,0:44:44.21:0,44,1033	1/1:38,0:21:44.55:243,45,0	0/0:38,0:35:71.25:0,71,837	1/1:37,1:30:64.82:397,65,0	1/1:26,0:26:6.99:240,7,0	0/1:6,0:4:7.88:8,0,30	0/1:11,0:7:8.48:12,0,8	0/0:13,1:11:13.34:0,13,75	1/1:7,1:6:14.51:86,15,0	1/1:16,0:13:5.31:26,5,0	0/0:33,0:25:2.10:0,2,676	0/1:18,0:14:60.19:95,0,60	0/1:10,1:7:6.94:97,0,7	1/1:30,1:31:40.58:386,41,0	1/1:18,0:11:14.75:93,15,0	0/0:17,0:16:9.62:0,10,69	0/1:23,0:19:13.52:14,0,70	0/0:6,0:5:1.41:0,1,3	1/1:26,4:26:43.51:365,44,0	1/1:15,1:14:11.52:191,12,0	1/1:3,1:4:11.81:92,12,0	1/1:11,0:11:29.02:178,29,0
chr10	43309156	.	GA	G	4350.05	PASS	AB=0.806;AC=27;AF=0.482;AN=56;BaseQRankSum=8.905;DP=584;FS=1.326;HRun=2;HaplotypeScore=137.8597;InbreedingCoeff=0.6136;MQ=37.28;MQ0=36;MQRankSum=-7.046;QD=15.05;ReadPosRankSum=2.635;VQSLOD=4.9388;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,1:30:57.62:0,58,854	0/0:15,0:15:6.88:0,7,363	0/0:4,0:1:3.01:0,3,41	0/0:6,0:4:12.04:0,12,153	0/0:30,0:28:81.71:0,82,1112	0/0:19,0:19:29.40:0,29,468	0/0:47,1:46:20.60:0,21,1060	1/1:27,12:22:35.26:463,35,0	0/0:38,2:37:68.39:0,68,853	1/1:20,18:30:69.62:728,70,0	1/1:17,9:26:10.81:432,11,0	0/0:7,0:5:4.53:0,5,26	0/0:9,2:7:4.73:0,5,37	0/1:15,1:11:8.63:9,0,24	1/1:3,5:6:12.51:152,13,0	1/1:16,0:13:2.90:17,3,0	0/0:35,0:27:19.96:0,20,734	0/1:7,11:14:63.15:208,0,63	0/1:10,2:10:2.97:139,0,3	1/1:15,16:31:49.99:779,50,0	1/1:13,5:11:14.83:139,15,0	0/0:18,0:17:0.92:0,1,8	0/0:23,0:19:1.82:0,2,6	1/1:6,0:5:2.11:5,2,0	1/1:15,14:25:55.65:642,56,0	1/1:12,5:15:11.54:230,12,0	1/1:3,1:4:8.25:84,8,0	1/1:3,8:11:26.91:322,27,0
chr10	43309158	.	AG	A	2641.55	PASS	AB=0.951;AC=27;AF=0.482;AN=56;BaseQRankSum=11.231;DP=584;FS=1.715;HRun=2;HaplotypeScore=141.0687;InbreedingCoeff=0.2678;MQ=37.59;MQ0=33;MQRankSum=-8.786;QD=7.98;ReadPosRankSum=5.003;VQSLOD=1.3099;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:30:51.01:0,51,882	0/0:16,0:16:37.55:0,38,486	0/0:5,0:1:3.01:0,3,42	0/0:6,0:4:12.04:0,12,163	0/0:29,0:27:81.26:0,81,1141	0/0:18,0:18:39.11:0,39,511	0/0:47,0:46:46.58:0,47,1122	0/1:34,2:24:44.40:166,0,44	0/0:41,0:38:75.11:0,75,919	1/1:36,2:31:39.83:384,40,0	0/1:24,2:26:8.83:245,0,9	0/1:7,0:5:10.83:11,0,19	0/1:11,0:7:7.87:8,0,35	0/1:15,1:11:13.36:81,0,13	1/1:8,0:6:3.54:60,4,0	0/0:16,0:13:3.44:0,3,21	0/0:35,1:28:32.74:0,33,844	0/1:17,0:14:71.76:72,0,77	0/1:14,0:12:41.68:77,0,42	1/1:29,2:31:53.93:444,54,0	1/1:19,0:12:13.98:81,14,0	1/1:18,0:17:49.83:306,50,0	1/1:22,0:18:4.95:216,5,0	1/1:6,0:5:2.69:18,3,0	1/1:26,2:24:15.92:304,16,0	0/1:16,1:15:62.12:139,0,62	0/1:3,1:4:8.29:53,0,8	1/1:11,1:12:10.26:165,10,0
chr10	43309160	.	GA	G	1458.15	PASS	AB=0.896;AC=18;AF=0.321;AN=56;BaseQRankSum=9.024;DP=587;FS=6.971;HRun=2;HaplotypeScore=144.4724;InbreedingCoeff=-0.0708;MQ=38.10;MQ0=30;MQRankSum=-9.779;QD=4.29;ReadPosRankSum=5.253;VQSLOD=0.6114;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,2:30:33.37:0,33,885	0/0:17,0:17:23.47:0,23,495	0/0:7,0:2:6.02:0,6,84	0/0:6,0:4:12.04:0,12,168	0/0:29,0:27:81.24:0,81,1131	0/0:17,0:17:39.11:0,39,512	0/1:42,2:43:0.80:1,0,1014	0/1:36,0:25:7.40:7,0,214	0/0:41,0:39:74.99:0,75,937	0/1:38,1:31:21.47:21,0,108	0/1:25,1:26:42.15:42,0,68	0/1:3,3:4:24.88:31,0,25	0/1:8,2:7:2.58:30,0,3	0/1:10,6:11:0.86:175,0,1	0/0:8,0:6:2.35:0,2,34	0/0:16,0:13:5.49:0,5,35	0/0:35,1:29:52.08:0,52,938	0/0:17,0:14:18.30:0,18,98	0/0:13,1:12:6.47:0,6,165	0/1:31,0:31:35.84:36,0,62	0/1:18,2:13:40.29:65,0,40	1/1:2,16:17:51.16:620,51,0	0/1:5,17:18:30:467,0,30	1/1:3,3:5:6.83:49,7,0	0/1:30,0:26:19.33:19,0,87	0/1:16,1:15:42.77:43,0,174	0/1:7,0:7:3.67:4,0,66	0/1:12,0:12:6.19:6,0,55
chr10	43309206	.	C	CACT	2586.56	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=5.708;DP=524;FS=8.503;HRun=0;HaplotypeScore=150.6467;InbreedingCoeff=0.9108;MQ=84.00;MQ0=0;MQRankSum=-7.260;QD=43.84;ReadPosRankSum=0.733;VQSLOD=4.7156;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:33:69.23:0,69,1102	0/0:18,0:18:48.15:0,48,760	0/0:25,0:24:66.22:0,66,1061	0/0:22,0:22:63.21:0,63,984	0/0:41,0:41:99:0,117,1911	0/0:17,0:17:42.14:0,42,686	0/0:28,0:28:72.25:0,72,1176	0/0:30,0:30:78.26:0,78,1233	0/0:35,0:35:87.28:0,87,1397	0/0:22,0:22:66.22:0,66,1060	0/0:23,0:23:57.19:0,57,878	1/1:5,3:8:6.02:133,6,0	1/1:0,3:3:9.03:200,9,0	1/1:0,7:7:15.05:334,15,0	0/0:11,0:11:27.09:0,27,441	0/0:7,0:7:9.03:0,9,147	0/0:26,0:26:69.24:0,69,1127	0/0:8,0:8:21.07:0,21,343	0/0:18,0:18:42.13:0,42,664	0/0:37,0:33:78.26:0,78,1175	0/0:7,0:7:21.07:0,21,343	1/1:4,16:20:48.16:1067,48,0	1/1:4,16:17:45.14:957,45,0	1/1:0,1:1:3.01:67,3,0	0/0:22,0:21:63.21:0,63,1016	0/0:9,0:9:27.05:0,27,411	0/0:8,0:8:21.07:0,21,332	0/0:17,0:17:51.17:0,51,809
chr10	43309248	.	TGTGACCCA	T	15681.70	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=15.919;DP=482;FS=54.362;HRun=0;HaplotypeScore=153.3003;InbreedingCoeff=0.8945;MQ=95.43;MQ0=0;MQRankSum=-16.599;QD=61.74;ReadPosRankSum=3.818;VQSLOD=2.3409;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,24:28:51.18:1431,51,0	0/0:13,0:13:39.10:0,39,1461	0/0:29,0:29:79.09:0,79,2964	0/0:35,0:34:91.02:0,91,3507	0/0:38,0:38:99:0,111,4440	0/0:26,0:26:72.25:0,72,3179	0/0:27,0:27:63.20:0,63,2478	1/1:8,0:8:14.98:238,15,0	0/0:29,0:29:78.21:0,78,3223	1/1:9,0:9:21.07:593,21,0	1/1:21,0:21:51.16:1351,51,0	1/1:8,0:8:18.06:509,18,0	1/1:5,0:5:15.05:424,15,0	1/1:12,0:12:33.11:932,33,0	1/1:16,0:15:39.13:1101,39,0	1/1:5,0:5:12.04:339,12,0	0/0:31,0:31:84.29:0,84,3680	1/1:4,0:4:3.01:85,3,0	1/1:5,0:5:9.03:254,9,0	1/1:32,0:25:60.21:1684,60,0	1/1:4,0:4:3.01:85,3,0	1/1:15,0:15:27.09:762,27,0	1/1:10,0:10:27.09:763,27,0	1/1:3,0:3:3.01:85,3,0	1/1:19,0:18:48.14:1222,48,0	1/1:23,0:22:66.17:1800,66,0	1/1:15,0:15:39.13:1092,39,0	1/1:12,0:12:33.11:933,33,0
chr10	43309250	.	TG	T	3512.50	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=16.897;DP=456;FS=53.602;HRun=1;HaplotypeScore=126.6544;InbreedingCoeff=0.8937;MQ=97.81;MQ0=0;MQRankSum=-16.741;QD=15.47;ReadPosRankSum=4.326;VQSLOD=0.6368;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:28:33.26:94,33,0	0/0:13,0:13:39.13:0,39,618	0/0:28,1:29:84.72:0,85,1287	0/0:35,0:34:73.86:0,74,1408	0/0:38,0:38:99:0,111,1764	0/0:26,0:26:75.24:0,75,1175	0/0:29,0:29:72.21:0,72,1092	1/1:4,3:7:14.89:108,15,0	0/0:29,0:29:81.26:0,81,1260	1/1:1,7:8:20.86:151,21,0	1/1:1,16:17:50.12:319,50,0	1/1:1,7:8:17.28:105,17,0	1/1:1,5:6:14.79:97,15,0	1/1:1,12:13:32.46:208,32,0	1/1:1,13:14:38.40:248,38,0	1/1:0,4:4:11.82:77,12,0	0/0:30,0:30:87.30:0,87,1382	1/1:2,1:3:2.97:20,3,0	1/1:0,3:3:8.94:65,9,0	1/1:0,27:20:59.14:397,59,0	1/1:2,1:3:2.96:19,3,0	1/1:0,9:9:26.53:167,27,0	1/1:0,9:9:26.49:165,26,0	1/1:0,3:3:2.94:18,3,0	1/1:2,15:16:47.24:323,47,0	1/1:1,22:22:65.27:444,65,0	1/1:0,13:13:38.47:267,38,0	1/1:1,11:12:32.62:221,33,0
chr10	43309252	.	ACCCAGTG	A	10883.72	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=16.571;DP=443;FS=51.738;HRun=0;HaplotypeScore=148.7193;InbreedingCoeff=0.8881;MQ=98.27;MQ0=0;MQRankSum=-16.733;QD=49.93;ReadPosRankSum=4.464;VQSLOD=2.8665;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:24:51.17:720,51,0	0/0:13,0:13:39.11:0,39,1460	0/0:28,0:28:82.16:0,82,2955	0/0:35,0:34:94.11:0,94,3443	0/0:36,0:36:99:0,105,4099	0/0:26,0:26:75.26:0,75,3128	0/0:29,0:29:72.22:0,72,2687	1/1:3,3:6:8.44:135,8,0	0/0:28,0:28:78.22:0,78,3013	1/1:0,7:7:21.07:443,21,0	1/1:1,16:17:50.38:941,50,0	1/1:1,7:8:18.06:353,18,0	1/1:1,5:6:18.06:340,18,0	1/1:1,12:13:33.11:665,33,0	1/1:0,13:13:39.13:788,39,0	1/1:0,4:4:12.04:243,12,0	0/0:30,0:30:87.30:0,87,3573	1/1:2,1:3:3.01:62,3,0	1/1:0,3:3:9.03:190,9,0	1/1:0,27:20:60.21:1203,60,0	1/1:1,1:2:3.01:61,3,0	1/1:0,9:9:27.09:542,27,0	1/1:0,9:9:27.09:539,27,0	1/1:0,3:3:3.01:60,3,0	1/1:1,15:15:44.52:840,45,0	1/1:1,22:22:60.86:1297,61,0	1/1:0,13:13:39.13:782,39,0	1/1:1,11:12:33.11:679,33,0
chr10	43309351	.	TCCTGCCTCAGCCTCTC	T	20973.59	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=15.821;DP=533;FS=166.266;HRun=0;HaplotypeScore=250.5793;InbreedingCoeff=0.9562;MQ=66.52;MQ0=0;MQRankSum=-13.761;QD=78.85;ReadPosRankSum=4.948;VQSLOD=1.6889;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,117,8151	0/0:13,0:13:36.12:0,36,2645	0/0:24,0:25:69.24:0,69,4135	0/0:26,0:25:72.25:0,72,4430	0/0:30,0:30:90.30:0,90,5794	0/0:25,0:25:75.26:0,75,5445	0/0:43,0:42:99:0,120,8348	1/1:16,20:36:60.16:2200,60,0	0/0:34,0:34:99:0,102,7251	1/1:2,16:18:42.14:1747,42,0	1/1:2,13:15:24.08:831,24,0	1/1:1,15:16:30.06:1420,30,0	1/1:3,8:11:18.06:811,18,0	1/1:6,8:14:33.04:1224,33,0	1/1:7,17:24:33.11:1562,33,0	1/1:3,14:17:33.11:1562,33,0	0/0:30,0:30:87.30:0,87,6487	1/1:3,5:8:15.05:669,15,0	1/1:4,7:11:21.06:516,21,0	1/1:2,19:21:51.17:2058,51,0	1/1:1,5:6:9.03:343,9,0	1/1:3,7:10:15.05:668,15,0	1/1:0,6:6:9.03:342,9,0	1/1:0,9:9:9.03:426,9,0	1/1:3,10:11:30.10:1331,30,0	1/1:0,15:15:45.13:1846,45,0	1/1:4,9:12:21.07:993,21,0	1/1:0,3:3:9.03:426,9,0
chr10	43309567	.	ATG	A	1017.86	PASS	AB=0.950;AC=4;AF=0.071;AN=56;BaseQRankSum=7.862;DP=970;FS=12.207;HRun=0;HaplotypeScore=144.8818;InbreedingCoeff=0.5215;MQ=66.09;MQ0=1;MQRankSum=1.226;QD=12.26;ReadPosRankSum=0.634;VQSLOD=2.5809;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,34:45:55.83:1110,56,0	0/0:16,0:16:39.13:0,39,639	0/0:44,1:38:28.89:0,29,882	0/0:52,0:43:60.94:0,61,1089	0/0:40,2:42:33.96:0,34,1574	0/0:28,0:28:72.25:0,72,1177	0/0:29,0:29:72.25:0,72,1171	0/0:28,0:28:48.16:0,48,778	0/0:33,0:33:81.28:0,81,1324	0/0:48,1:49:77.16:0,77,1758	0/0:28,1:29:7.94:0,8,651	0/0:31,1:32:81.28:0,81,1328	0/0:29,0:29:23.05:0,23,893	0/0:34,0:34:78.27:0,78,1279	0/0:51,0:51:74.44:0,74,1728	0/0:53,0:53:99:0,126,2059	0/0:28,0:28:78.25:0,78,1254	0/0:20,0:20:60.18:0,60,944	0/1:17,1:17:10.12:10,0,367	0/0:20,0:20:30.10:0,30,491	0/0:71,3:74:99:0,121,3010	0/0:32,1:33:29.49:0,29,994	0/0:19,0:19:36.12:0,36,590	0/0:40,0:40:84.29:0,84,1377	0/0:19,0:20:39.12:0,39,617	0/0:42,0:42:99:0,105,1703	0/0:41,0:41:99:0,114,1864	0/1:19,1:20:1.08:1,0,503
chr10	43310254	.	TGGCCAAATTGTAGA	T	24876.28	PASS	AB=0.509;AC=25;AF=0.446;AN=56;BaseQRankSum=17.026;DP=669;FS=4.039;HRun=0;HaplotypeScore=286.6732;InbreedingCoeff=0.9010;MQ=77.64;MQ0=0;MQRankSum=-18.166;QD=86.68;ReadPosRankSum=1.017;VQSLOD=4.2155;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,129,8246	0/0:14,0:14:39.13:0,39,2679	0/0:21,0:21:44.23:0,44,2464	0/0:17,0:17:38.10:0,38,2057	0/0:26,0:26:75.24:0,75,4727	0/0:27,0:27:81.25:0,81,4932	0/0:28,0:28:84.29:0,84,5666	1/1:0,27:27:81.01:2581,81,0	0/0:36,0:36:99:0,105,6381	1/1:1,27:28:69.19:2617,69,0	1/1:0,21:21:30.03:1121,30,0	0/0:21,0:21:63.21:0,63,3904	0/0:29,0:29:87.28:0,87,5586	0/0:25,0:25:75.26:0,75,5089	1/1:0,42:42:90.24:3778,90,0	0/1:1,28:29:99:2512,0,151	0/0:25,0:25:75.23:0,75,4802	1/1:0,8:8:18.06:740,18,0	1/1:0,17:17:47.90:1317,48,0	1/1:1,23:24:48.16:2075,48,0	1/1:1,14:15:18.06:760,18,0	0/0:20,0:20:54.19:0,54,3691	0/0:25,0:25:69.24:0,69,4623	0/0:23,0:23:69.23:0,69,4519	1/1:0,21:21:57.02:2130,57,0	1/1:1,17:18:47.96:1768,48,0	1/1:0,36:36:78.27:3349,78,0	1/1:0,1:1:3.01:130,3,0
chr10	43312305	.	CATTGG	C	14667.56	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=12.547;DP=515;FS=0.379;HRun=0;HaplotypeScore=111.7853;InbreedingCoeff=0.9814;MQ=81.36;MQ0=0;MQRankSum=-9.284;QD=41.20;ReadPosRankSum=4.509;VQSLOD=4.7553;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,24:26:57.20:1168,57,0	0/0:4,0:4:12.04:0,12,348	0/0:18,0:18:48.14:0,48,1234	0/0:24,0:24:60.19:0,60,1616	0/0:17,0:17:51.18:0,51,1472	0/0:20,0:20:54.18:0,54,1562	0/0:23,0:23:69.24:0,69,2065	1/1:2,12:14:36.09:664,36,0	0/0:24,1:25:17.77:0,18,1982	1/1:1,18:20:54.09:953,54,0	1/1:0,9:9:12.04:246,12,0	1/1:0,23:23:63.22:1290,63,0	1/1:1,10:11:23.76:492,24,0	1/1:3,20:23:48.16:983,48,0	1/1:2,22:24:51.18:1045,51,0	1/1:4,13:17:33.11:676,33,0	0/0:28,0:28:78.74:0,79,2271	1/1:1,24:25:63.22:1292,63,0	1/1:9,10:19:32.97:576,33,0	1/1:2,8:10:18.06:369,18,0	1/1:5,26:31:38.70:798,39,0	1/1:1,13:14:30.10:614,30,0	1/1:4,7:11:15.05:307,15,0	1/1:3,20:23:45.63:923,46,0	1/1:4,9:14:21.07:430,21,0	1/1:4,16:20:48.16:981,48,0	1/1:4,11:15:24.08:491,24,0	1/1:0,7:7:18.06:369,18,0
chr10	43313813	.	CACACAT	C	4995.54	PASS	AB=0.874;AC=29;AF=0.537;AN=54;BaseQRankSum=8.825;DP=685;FS=27.244;HRun=0;HaplotypeScore=167.8125;InbreedingCoeff=0.4246;MQ=56.98;MQ0=44;MQRankSum=-9.266;QD=10.56;ReadPosRankSum=-2.362;VQSLOD=1.9420;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:42,0:41:3.91:308,4,0	0/0:9,0:9:18.70:0,19,198	0/0:29,0:22:61.45:0,61,903	0/0:21,0:14:36.12:0,36,522	0/0:25,0:25:41.20:0,41,485	0/0:17,0:17:30.73:0,31,430	0/0:31,0:31:74.44:0,74,1074	0/1:30,0:28:63.39:389,0,63	0/0:22,0:22:50.08:0,50,510	1/1:4,22:23:48.15:961,48,0	0/1:3,17:19:0:0,0,0	1/1:21,0:18:27.09:494,27,0	0/1:29,0:28:21.89:202,0,22	1/1:23,0:23:7.09:339,7,0	0/1:31,0:29:99:104,0,293	0/1:21,0:19:32.57:33,0,224	0/0:37,0:37:91.74:0,92,2235	0/1:6,16:18:3.60:65,0,4	1/1:23,0:20:22.88:497,23,0	1/1:19,0:18:8.64:199,9,0	1/1:36,0:30:3:26,3,0	1/1:10,0:10:2.79:51,3,0	0/0:12,0:10:0:0,0,0	0/1:40,0:36:15.42:100,0,15	1/1:5,20:22:8.76:176,9,0	1/1:9,21:27:44.91:687,45,0	1/1:25,0:25:21.07:363,21,0	./.
chr10	43313815	.	CACAT	C	2764.11	PASS	AB=0.918;AC=38;AF=0.826;AN=46;BaseQRankSum=4.162;DP=671;FS=12.060;HRun=0;HaplotypeScore=155.2081;InbreedingCoeff=0.2889;MQ=55.88;MQ0=45;MQRankSum=-3.288;QD=5.37;ReadPosRankSum=-1.903;VQSLOD=1.8728;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:40,0:39:17.86:162,18,0	1/1:5,4:9:9.03:137,9,0	./.	./.	1/1:12,10:23:14.72:228,15,0	0/1:10,5:15:57.73:125,0,58	1/1:27,5:32:3.01:46,3,0	./.	1/1:13,9:22:27.09:412,27,0	1/1:24,0:23:36.06:356,36,0	0/1:19,0:19:0:0,0,0	1/1:21,0:18:27.02:244,27,0	1/1:28,0:27:12.01:109,12,0	1/1:24,0:24:20.88:174,21,0	0/1:31,0:29:4.12:4,0,33	0/0:21,0:19:15.64:0,16,44	0/1:33,3:36:37.41:37,0,1013	1/1:20,0:18:3.01:30,3,0	1/1:21,0:18:21.01:191,21,0	1/1:19,0:18:7.54:96,8,0	./.	1/1:10,0:10:2.99:24,3,0	0/0:12,0:10:0:0,0,0	1/1:39,0:35:5.84:51,6,0	1/1:23,0:21:8.56:56,9,0	1/1:27,0:26:26.71:217,27,0	1/1:24,0:24:20.97:184,21,0	./.
chr10	43313817	.	CATACAT	C	6122.36	PASS	AB=0.757;AC=32;AF=0.593;AN=54;BaseQRankSum=7.973;DP=653;FS=36.839;HRun=0;HaplotypeScore=150.9047;InbreedingCoeff=0.6412;MQ=55.71;MQ0=46;MQRankSum=-9.809;QD=13.49;ReadPosRankSum=-1.201;VQSLOD=2.4004;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,35:39:5.34:420,5,0	0/0:8,0:8:20.26:0,20,178	0/0:27,0:20:60.19:0,60,768	0/0:19,0:12:36.08:0,36,452	0/0:22,0:22:43.82:0,44,455	0/0:14,0:14:29.30:0,29,401	0/0:31,0:31:71.97:0,72,936	1/1:6,0:24:58.04:851,58,0	0/0:21,0:21:54.78:0,55,486	1/1:26,0:23:43.73:618,44,0	0/1:19,0:18:0:0,0,0	1/1:1,17:18:27.09:656,27,0	1/1:2,25:27:12.04:292,12,0	1/1:2,21:23:21.07:476,21,0	0/1:3,1:27:99:250,0,194	0/1:0,0:19:99:102,0,147	0/0:36,0:36:95.74:0,96,2303	0/1:21,0:17:2.89:46,0,3	1/1:6,16:18:45.12:846,45,0	1/1:3,14:18:15.01:297,15,0	1/1:7,27:30:3.01:44,3,0	1/1:2,8:10:2.79:68,3,0	0/0:2,10:10:0:0,0,0	1/1:5,32:35:5.70:143,6,0	1/1:23,0:20:8.76:124,9,0	1/1:26,0:23:35.12:378,35,0	1/1:1,23:24:24.01:513,24,0	./.
chr10	43314002	.	AG	A	1326.40	PASS	AB=0.981;AC=32;AF=0.571;AN=56;BaseQRankSum=7.873;DP=499;FS=9.448;HRun=1;HaplotypeScore=76.7926;InbreedingCoeff=0.1815;MQ=56.43;MQ0=19;MQRankSum=-1.430;QD=3.38;ReadPosRankSum=1.299;VQSLOD=-0.5077;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:47,2:47:31.59:222,32,0	0/0:6,0:6:8.81:0,9,64	0/1:32,1:10:1.77:2,0,80	0/1:24,0:6:4.52:5,0,24	0/0:25,1:26:13.22:0,13,298	0/0:11,0:11:9.59:0,10,171	0/0:18,0:18:21.09:0,21,158	1/1:24,1:24:16.41:106,16,0	0/0:9,0:9:13.45:0,13,77	0/1:23,1:24:49.30:71,0,49	0/1:7,0:7:7.87:27,0,8	1/1:6,0:5:2.98:9,3,0	1/1:11,0:10:13.86:51,14,0	1/1:10,0:10:22.37:105,22,0	0/1:8,0:8:3.91:15,0,4	0/1:13,0:13:12.37:26,0,12	0/0:36,0:35:59.89:0,60,640	0/1:22,0:20:31.65:32,0,43	0/1:26,1:25:13.69:144,0,14	0/1:25,1:26:18.63:151,0,19	0/1:11,0:10:1.56:2,0,16	1/1:6,0:6:13.45:71,13,0	1/1:12,0:12:25.76:127,26,0	1/1:11,0:8:17.25:72,17,0	0/1:23,1:24:31.78:76,0,32	0/1:22,1:20:53.39:70,0,53	1/1:10,1:10:15.25:98,15,0	1/1:10,0:10:6.18:28,6,0
chr10	43314003	.	GAA	G	4885.92	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-3.918;DP=487;FS=0.888;HRun=14;HaplotypeScore=71.9467;InbreedingCoeff=0.9432;MQ=56.75;MQ0=18;MQRankSum=1.318;QD=22.11;ReadPosRankSum=-0.218;VQSLOD=4.4501;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:48:70.13:0,70,271	0/0:5,0:5:9.03:0,9,151	0/0:33,0:10:15.38:0,15,192	0/0:24,0:6:9.81:0,10,98	0/0:26,0:26:63.14:0,63,899	0/0:11,0:11:27.05:0,27,407	0/0:17,0:17:30.09:0,30,455	1/1:2,23:24:68.17:799,68,0	0/0:10,0:10:17.99:0,18,218	1/1:6,18:24:39.99:559,40,0	1/1:2,4:6:9.02:101,9,0	0/0:5,0:5:9:0,9,84	0/0:10,0:10:19.89:0,20,153	0/0:10,0:10:20.04:0,20,105	1/1:2,5:7:9.02:107,9,0	1/1:3,10:13:18.05:214,18,0	0/0:35,0:34:80.94:0,81,1184	1/1:6,14:19:26.93:305,27,0	1/1:7,20:26:52.01:687,52,0	1/1:5,19:24:62.66:706,63,0	1/1:3,8:10:12.01:146,12,0	0/0:6,0:6:13.65:0,14,61	0/0:9,0:12:19.92:0,20,110	0/0:11,0:8:15.63:0,16,89	1/1:4,20:24:30.08:352,30,0	1/1:7,16:20:42.06:477,42,0	1/1:4,7:10:18.53:215,19,0	1/1:0,6:6:18.06:216,18,0
chr10	43314010	.	AAT	A	1423.27	PASS	AB=0.973;AC=17;AF=0.304;AN=56;BaseQRankSum=3.122;DP=482;FS=1.330;HRun=0;HaplotypeScore=85.1367;InbreedingCoeff=0.2615;MQ=61.93;MQ0=10;MQRankSum=0.941;QD=6.38;ReadPosRankSum=2.553;VQSLOD=2.9481;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:41:70.90:0,71,421	0/0:4,0:4:9.03:0,9,135	0/0:27,0:10:12.30:0,12,252	0/0:23,0:9:17.48:0,17,150	0/0:29,0:29:75.19:0,75,1164	0/0:10,0:10:24.08:0,24,423	0/0:24,0:24:48.06:0,48,621	0/1:27,0:26:8.40:202,0,8	0/0:10,0:10:18.02:0,18,230	0/1:25,1:26:48.13:120,0,48	0/1:5,0:5:12.17:48,0,12	0/0:6,0:6:11.96:0,12,117	0/0:13,0:12:26.35:0,26,231	0/0:10,0:10:20.39:0,20,145	0/1:10,1:11:53.72:54,0,58	1/1:14,0:14:1.33:80,1,0	0/0:30,0:30:75.12:0,75,1213	0/1:18,1:19:12.08:113,0,12	1/1:25,0:25:35.75:218,36,0	1/1:22,2:24:10.29:295,10,0	0/1:11,0:10:3:32,0,3	0/0:7,0:7:14.71:0,15,92	0/0:14,0:14:37.62:0,38,225	0/0:10,0:8:20.35:0,20,144	1/1:21,0:21:27.92:137,28,0	0/1:19,0:19:12.70:132,0,13	0/1:12,1:12:16.74:105,0,17	0/1:7,0:7:4.94:61,0,5
chr10	43314235	.	AGAGGGGCTCACCACC	A	24094.02	PASS	AB=0.532;AC=36;AF=0.643;AN=56;BaseQRankSum=16.387;DP=480;FS=39.042;HRun=0;HaplotypeScore=207.5868;InbreedingCoeff=0.8373;MQ=71.21;MQ0=1;MQRankSum=-15.975;QD=100.81;ReadPosRankSum=3.119;VQSLOD=3.2193;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,132,8849	0/0:8,0:8:24.08:0,24,1787	0/0:23,0:23:69.21:0,69,3708	0/0:19,0:20:60.21:0,60,3417	0/0:20,0:20:57.20:0,57,3764	0/0:27,0:27:78.27:0,78,5390	0/0:25,0:25:75.21:0,75,5125	1/1:0,7:7:21.07:978,21,0	0/0:24,0:24:72.23:0,72,4824	1/1:0,12:14:36.10:1384,36,0	1/1:0,14:14:42.14:1820,42,0	1/1:1,7:8:15.05:699,15,0	1/1:0,14:14:36.12:1677,36,0	1/1:0,11:11:27.09:1256,27,0	1/1:0,24:24:20.65:978,21,0	0/1:1,17:18:99:1364,0,197	0/0:47,0:47:99:0,141,10285	0/1:2,8:10:99:681,0,121	1/1:0,7:7:21.04:860,21,0	1/1:0,12:12:36.08:1522,36,0	1/1:0,8:8:24.08:1056,24,0	1/1:0,12:11:21.07:978,21,0	1/1:0,10:10:27.09:1209,27,0	1/1:0,10:10:24.08:1110,24,0	1/1:0,19:19:54.19:2463,54,0	1/1:0,13:13:18.04:722,18,0	1/1:0,17:17:45.15:2080,45,0	1/1:0,10:10:27.09:1258,27,0
chr10	43316494	.	TA	T	9091.48	PASS	AB=1.000;AC=41;AF=0.732;AN=56;BaseQRankSum=9.868;DP=549;FS=0.797;HRun=9;HaplotypeScore=54.5891;InbreedingCoeff=0.9472;MQ=69.44;MQ0=0;MQRankSum=-0.023;QD=22.07;ReadPosRankSum=0.926;VQSLOD=5.5677;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,25:25:63.03:576,63,0	0/0:11,0:11:26.99:0,27,282	0/1:6,0:6:0.80:1,0,27	0/0:9,0:8:15.02:0,15,155	0/0:21,0:21:54.16:0,54,620	0/0:20,0:20:60.18:0,60,692	0/0:23,0:23:57.16:0,57,648	1/1:6,26:32:78.02:709,78,0	0/0:25,0:25:66.20:0,66,762	1/1:3,14:17:42.02:384,42,0	1/1:1,18:19:53.94:478,54,0	1/1:0,19:19:51.03:467,51,0	1/1:1,17:18:42.02:384,42,0	1/1:1,21:22:57.03:522,57,0	1/1:2,10:12:27.01:247,27,0	1/1:3,14:17:42.02:384,42,0	0/0:28,0:28:84.20:0,84,937	1/1:3,21:24:60.01:543,60,0	1/1:7,14:21:42.01:384,42,0	1/1:3,23:26:68.98:621,69,0	1/1:1,10:11:27.01:247,27,0	1/1:2,13:15:39.02:357,39,0	1/1:7,12:19:33.01:302,33,0	1/1:6,21:27:60.01:543,60,0	1/1:2,18:20:22.44:459,22,0	1/1:3,27:30:81.04:741,81,0	1/1:4,18:22:54.02:494,54,0	1/1:0,10:10:27.01:247,27,0
chr10	43317267	.	AGG	A	1119.88	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=1.884;DP=558;FS=4.533;HRun=3;HaplotypeScore=109.1749;InbreedingCoeff=0.9650;MQ=66.49;MQ0=9;MQRankSum=3.033;QD=9.33;ReadPosRankSum=-1.796;VQSLOD=-0.1925;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:82.15:0,82,1397	0/0:9,0:9:27.08:0,27,490	0/0:32,0:15:26.76:0,27,387	0/0:52,0:26:29.33:0,29,369	0/0:21,0:21:63.19:0,63,1125	0/0:18,0:18:43.51:0,44,760	0/0:17,0:16:32.65:0,33,668	0/0:26,0:24:22.57:0,23,468	0/0:7,0:7:21.07:0,21,403	1/1:23,0:23:38.51:220,39,0	1/1:17,2:19:16.82:192,17,0	0/0:12,0:12:24.02:0,24,247	0/0:17,0:17:30.06:0,30,309	0/0:10,0:9:23.99:0,24,236	1/1:10,0:10:3.81:51,4,0	1/1:14,0:14:24.25:147,24,0	0/0:33,0:32:81.79:0,82,1434	1/1:21,0:21:28.98:251,29,0	0/0:13,0:13:34.84:0,35,341	0/0:19,0:19:50.39:0,50,465	0/0:26,0:26:54.01:0,54,511	0/0:8,0:8:20.08:0,20,194	0/0:16,0:16:35.89:0,36,339	0/0:20,0:19:36.06:0,36,364	1/1:15,3:18:36.04:317,36,0	1/1:14,1:15:23.61:135,24,0	0/0:29,0:28:51.03:0,51,495	0/0:18,0:18:51.05:0,51,499
chr10	43317269	.	G	GGAGA	7981.92	PASS	AB=0.941;AC=29;AF=0.518;AN=56;BaseQRankSum=-9.768;DP=574;FS=0.000;HRun=0;HaplotypeScore=106.5362;InbreedingCoeff=0.5109;MQ=64.78;MQ0=10;MQRankSum=-0.676;QD=21.69;ReadPosRankSum=-1.106;VQSLOD=3.8661;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:70.77:0,71,1081	0/0:9,0:9:24.08:0,24,402	0/0:30,0:13:17.04:0,17,237	0/1:52,0:25:0.26:0,0,184	0/0:21,0:21:60.18:0,60,962	0/0:17,0:18:36.10:0,36,536	0/0:16,0:17:36.09:0,36,509	1/1:20,6:25:45.06:800,45,0	0/0:8,0:8:24.07:0,24,379	0/1:23,0:23:99:152,0,190	0/1:21,0:21:45.65:46,0,301	1/1:2,10:12:21.07:520,21,0	1/1:2,16:19:24.08:596,24,0	1/1:4,7:11:21.07:484,21,0	0/1:10,0:10:23.54:24,0,139	0/1:15,0:15:12.16:12,0,227	0/0:33,0:33:72.11:0,72,1052	0/0:20,0:20:3.39:0,3,233	1/1:4,9:13:30.05:611,30,0	1/1:2,14:18:44.78:906,45,0	1/1:8,18:26:30.10:740,30,0	1/1:1,7:8:15.05:373,15,0	0/1:5,12:17:21.04:507,0,21	1/1:5,14:20:26.83:609,27,0	0/1:18,0:18:99:110,0,179	0/0:14,0:14:41.37:0,41,316	1/1:9,22:30:30.10:746,30,0	1/1:9,10:24:30.10:745,30,0
chr10	43318332	.	CCCTT	C	1189.02	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.001;DP=703;FS=2.868;HRun=0;HaplotypeScore=112.4310;InbreedingCoeff=0.9918;MQ=78.34;MQ0=0;MQRankSum=-0.909;QD=45.73;ReadPosRankSum=-0.218;VQSLOD=4.2324;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,108,2807	0/0:7,0:7:18.06:0,18,486	0/0:28,0:28:81.28:0,81,1981	0/0:18,0:18:51.17:0,51,1156	1/1:2,24:26:69.24:1284,69,0	0/0:24,0:24:72.25:0,72,1944	0/0:27,0:27:78.21:0,78,1920	0/0:42,0:42:99:0,105,2723	0/0:16,0:16:42.14:0,42,1129	0/0:23,0:23:69.24:0,69,1845	0/0:17,0:17:51.18:0,51,1366	0/0:22,0:22:66.21:0,66,1688	0/0:23,0:23:69.24:0,69,1855	0/0:25,0:25:75.26:0,75,2021	0/0:25,0:25:75.26:0,75,1988	0/0:28,0:28:81.28:0,81,2139	0/0:38,0:38:99:0,102,2557	0/0:32,0:32:93.32:0,93,2509	0/0:15,0:15:36.11:0,36,916	0/0:27,0:27:78.25:0,78,1988	0/0:37,0:37:99:0,108,2822	0/0:16,0:16:45.15:0,45,1208	0/0:17,0:17:48.16:0,48,1285	0/0:35,0:35:99:0,105,2652	0/0:13,0:13:39.13:0,39,1052	0/0:34,0:34:96.33:0,96,2550	0/0:32,0:32:96.33:0,96,2532	0/0:15,0:15:45.15:0,45,1204
chr10	43319106	.	G	GT	7174.25	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-13.557;DP=716;FS=8.264;HRun=1;HaplotypeScore=68.1503;InbreedingCoeff=0.9983;MQ=81.36;MQ0=0;MQRankSum=-0.963;QD=42.20;ReadPosRankSum=1.966;VQSLOD=5.0696;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,132,1698	0/0:14,0:14:39.13:0,39,506	0/0:31,0:31:84.71:0,85,1043	0/0:18,0:18:39.06:0,39,473	0/0:20,0:20:57.19:0,57,739	0/0:23,0:23:69.21:0,69,878	0/0:28,0:28:78.22:0,78,983	1/1:2,27:29:81.25:1175,81,0	0/0:33,0:33:99:0,99,1266	0/0:39,0:39:99:0,114,1469	0/0:22,0:22:66.20:0,66,843	0/0:31,0:31:90.29:0,90,1168	0/0:24,0:24:72.20:0,72,917	0/0:21,0:21:60.18:0,60,763	0/0:20,0:20:60.20:0,60,779	0/0:23,0:23:66.21:0,66,857	0/0:32,0:32:96.29:0,96,1229	0/0:27,0:27:78.25:0,78,1011	1/1:0,18:18:54.16:786,54,0	1/1:0,20:20:60.20:899,60,0	1/1:1,64:65:99:2743,184,0	0/0:19,0:19:51.17:0,51,661	0/0:15,0:15:42.12:0,42,528	0/0:24,0:24:69.14:0,69,858	0/0:17,0:17:51.17:0,51,662	0/0:20,0:20:60.19:0,60,767	1/1:1,31:32:87.29:1301,87,0	1/1:0,6:5:18.06:270,18,0
chr10	43320178	.	CGT	C	602.38	PASS	AB=0.932;AC=26;AF=0.520;AN=50;BaseQRankSum=3.650;DP=561;FS=0.000;HRun=0;HaplotypeScore=81.6549;InbreedingCoeff=0.2534;MQ=57.16;MQ0=12;MQRankSum=0.004;QD=2.13;ReadPosRankSum=1.558;VQSLOD=1.4901;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:15.05:0,15,200	0/1:11,1:12:26.09:26,0,38	./.	./.	1/1:14,0:20:5.59:25,6,0	0/1:10,1:11:23.12:23,0,60	0/1:16,1:18:17.14:17,0,123	0/0:18,0:16:0.89:0,1,2	0/1:20,1:21:38.36:38,0,178	0/0:16,0:16:3.01:0,3,44	0/0:17,0:16:6.02:0,6,88	1/1:13,4:17:12.03:129,12,0	1/1:18,0:18:2.58:24,3,0	1/1:18,4:22:9.02:96,9,0	0/0:21,0:27:18.01:0,18,175	0/0:20,0:20:12.04:0,12,177	0/0:34,2:36:12.25:0,12,512	0/1:22,2:24:11.09:11,0,216	./.	0/0:22,0:22:6.02:0,6,87	0/1:23,2:24:18.83:26,0,19	1/1:19,3:22:3.01:32,3,0	1/1:13,2:16:6.02:64,6,0	1/1:12,3:17:11.69:92,12,0	1/1:12,1:13:3:32,3,0	0/0:25,0:25:9.48:0,9,95	1/1:12,1:13:3.01:32,3,0	1/1:10,2:11:9.02:96,9,0
chr10	43322331	.	C	CTGTGTGTGTGTG	9420.87	PASS	AC=50;AF=0.926;AN=54;BaseQRankSum=-1.180;DP=720;FS=0.000;HRun=0;HaplotypeScore=226.4755;InbreedingCoeff=0.3899;MQ=65.17;MQ0=9;MQRankSum=-2.577;QD=15.78;ReadPosRankSum=1.760;VQSLOD=3.7560;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:36,0:34:18.01:313,18,0	1/1:5,0:7:6.02:192,6,0	./.	0/0:54,0:25:4.54:0,5,18	1/1:25,0:23:14.18:353,14,0	1/1:19,0:19:12.04:304,12,0	1/1:12,0:22:3.01:109,3,0	1/1:32,0:32:23.01:320,23,0	1/1:11,0:21:6.02:152,6,0	1/1:29,0:29:45.10:1439,45,0	1/1:19,0:19:3.01:73,3,0	1/1:22,0:22:11.96:234,12,0	1/1:20,0:19:25.31:704,25,0	1/1:19,0:26:2.04:115,2,0	1/1:23,0:23:18.02:372,18,0	1/1:14,6:25:3.01:174,3,0	0/0:19,0:19:23.61:0,24,436	1/1:17,3:23:13.29:547,13,0	1/1:27,0:27:20.50:513,21,0	1/1:20,0:22:18.49:409,18,0	1/1:27,0:43:7.23:244,7,0	1/1:16,4:30:3.01:174,3,0	1/1:13,0:17:6.02:215,6,0	1/1:32,0:32:5.76:219,6,0	1/1:13,5:22:9.03:410,9,0	1/1:24,0:23:45.12:1631,45,0	1/1:12,0:22:3.01:77,3,0	1/1:7,0:7:6.02:128,6,0
chr10	43323710	.	C	CG	3147.79	PASS	AB=0.556;AC=9;AF=0.161;AN=56;BaseQRankSum=-10.352;DP=675;FS=5.079;HRun=7;HaplotypeScore=69.6170;InbreedingCoeff=0.9194;MQ=83.67;MQ0=0;MQRankSum=-1.035;QD=27.61;ReadPosRankSum=0.413;VQSLOD=4.3994;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:72.09:0,72,689	0/0:8,0:8:21.03:0,21,203	0/0:28,0:27:66.09:0,66,637	0/0:21,0:21:45.71:0,46,428	0/0:20,0:20:48.05:0,48,457	0/0:18,0:18:48.07:0,48,463	0/0:26,0:26:66.05:0,66,619	0/0:20,0:20:45.03:0,45,430	0/0:13,0:13:36.05:0,36,348	1/1:7,21:28:63.18:747,63,0	0/1:2,8:10:1.89:262,0,2	0/0:33,0:33:84.12:0,84,809	0/0:26,0:26:60.06:0,60,573	0/0:25,0:25:66.10:0,66,637	0/0:30,0:30:75.09:0,75,719	0/0:24,0:24:69.11:0,69,666	0/0:40,0:40:93.07:0,93,876	1/1:3,13:16:39.12:471,39,0	0/0:19,0:19:42.05:0,42,402	0/0:23,0:23:57.06:0,57,538	0/0:63,0:63:99:0,165,1593	0/0:19,0:19:48.06:0,48,458	0/0:12,0:12:33.05:0,33,318	0/0:35,0:35:99:0,102,975	1/1:1,27:28:75.23:905,75,0	1/1:6,26:32:78.22:928,78,0	0/0:22,0:22:66.11:0,66,637	0/0:6,0:6:18.03:0,18,173
chr10	43328600	.	AGATG	A	9638.54	PASS	AB=0.524;AC=39;AF=0.696;AN=56;BaseQRankSum=10.370;DP=651;FS=0.429;HRun=0;HaplotypeScore=161.3848;InbreedingCoeff=0.8914;MQ=73.98;MQ0=1;MQRankSum=0.325;QD=20.64;ReadPosRankSum=0.880;VQSLOD=4.4767;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,22:32:9.03:138,9,0	0/0:5,0:5:12:0,12,105	0/0:26,0:22:26.90:0,27,658	0/0:34,0:25:50.99:0,51,927	0/0:23,0:23:59.52:0,60,1218	0/0:24,0:24:21:0,21,311	0/0:22,0:22:48.09:0,48,618	1/1:3,25:26:69.21:1066,69,0	0/0:20,0:19:12.80:0,13,145	1/1:1,30:31:90.27:1403,90,0	1/1:2,17:19:11.92:168,12,0	1/1:26,2:28:59.43:573,59,0	1/1:18,0:18:35.93:321,36,0	1/1:18,0:18:44.77:455,45,0	1/1:4,18:22:6.02:89,6,0	1/1:10,9:19:51.16:710,51,0	0/0:29,0:29:69.18:0,69,1323	1/1:17,2:19:29.05:679,29,0	1/1:6,10:16:30.02:415,30,0	1/1:3,20:23:42.09:506,42,0	1/1:5,25:30:9.03:153,9,0	0/1:2,20:22:0.11:0,0,0	1/1:1,17:18:2.88:49,3,0	1/1:32,0:32:59.86:607,60,0	1/1:22,2:24:56.98:896,57,0	1/1:4,26:30:75.68:708,76,0	1/1:4,21:25:30.10:486,30,0	1/1:1,12:13:15.05:217,15,0
chr10	43328632	.	GGATGGATAGATAGATA	G	2671.44	PASS	AB=0.934;AC=27;AF=0.482;AN=56;BaseQRankSum=-0.237;DP=610;FS=1.681;HRun=0;HaplotypeScore=252.3358;InbreedingCoeff=0.3927;MQ=53.58;MQ0=27;MQRankSum=-5.233;QD=7.81;ReadPosRankSum=0.277;VQSLOD=2.5182;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:7.87:0,8,878	1/1:7,0:6:17.99:243,18,0	0/0:15,0:6:12.01:0,12,112	0/0:29,0:9:14.09:0,14,131	0/0:22,0:21:45.01:0,45,677	1/1:1,23:24:3.01:79,3,0	1/1:17,0:15:20.23:306,20,0	0/0:34,0:29:3.21:0,3,151	0/1:3,0:22:7.96:56,0,8	0/1:22,0:22:0.74:68,0,1	1/1:17,0:16:5.17:61,5,0	0/0:25,0:25:50.44:0,50,583	0/1:15,0:15:15.32:15,0,385	0/0:17,0:17:30.27:0,30,531	1/1:22,0:22:13.88:295,14,0	1/1:25,0:25:8.66:376,9,0	0/0:24,0:24:22.02:0,22,331	0/1:15,0:15:15.54:167,0,16	0/1:19,0:17:18.73:19,0,130	1/1:19,0:19:4.48:160,4,0	0/1:27,0:26:25.71:185,0,26	0/0:24,0:24:11.42:0,11,346	0/0:21,0:21:5.92:0,6,280	0/0:26,0:26:47.03:0,47,684	1/1:31,0:31:5:97,5,0	0/1:29,0:29:99:148,0,450	1/1:22,0:21:22.38:195,22,0	1/1:8,0:8:11.78:392,12,0
chr10	43328636	.	GGATAGATAGATA	G	3673.04	PASS	AB=1.000;AC=40;AF=0.769;AN=52;BaseQRankSum=-0.803;DP=598;FS=5.208;HRun=0;HaplotypeScore=218.2564;InbreedingCoeff=0.3859;MQ=53.18;MQ0=26;MQRankSum=-1.537;QD=8.02;ReadPosRankSum=-1.782;VQSLOD=1.8497;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:33.07:0,33,884	1/1:7,0:6:9.03:130,9,0	./.	./.	0/0:23,0:22:15.05:0,15,445	1/1:24,0:24:2.92:17,3,0	1/1:15,0:13:9.03:172,9,0	1/1:30,0:25:1.24:3,1,0	1/1:21,0:20:6.02:169,6,0	1/1:22,0:22:6:87,6,0	1/1:16,0:15:6.02:180,6,0	0/1:24,0:24:16.91:23,0,17	0/1:17,0:17:77.69:98,0,78	0/1:16,0:16:2.57:3,0,132	1/1:21,1:22:18.06:564,18,0	1/1:13,13:26:15.05:459,15,0	1/1:14,12:26:3.01:102,3,0	1/1:14,0:14:12.04:365,12,0	1/1:16,0:15:3.01:102,3,0	1/1:19,0:19:9.03:209,9,0	1/1:28,0:27:6.02:151,6,0	0/0:27,0:27:23.65:0,24,345	0/0:21,0:21:6.01:0,6,199	0/1:26,0:26:9.92:10,0,151	1/1:17,13:30:6.02:111,6,0	1/1:29,0:29:21.50:331,22,0	1/1:22,0:21:9.02:112,9,0	1/1:5,0:8:12.04:275,12,0
chr10	43328641	.	GATA	G	353.34	PASS	AB=0.954;AC=14;AF=0.250;AN=56;BaseQRankSum=4.310;DP=570;FS=37.668;HRun=0;HaplotypeScore=158.9056;InbreedingCoeff=-0.0077;MQ=51.77;MQ0=28;MQRankSum=1.411;QD=1.55;ReadPosRankSum=1.425;VQSLOD=1.3424;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:47.79:0,48,714	0/0:8,0:7:18.31:0,18,155	0/0:12,0:3:9.01:0,9,102	0/0:21,0:2:6:0,6,62	0/0:21,0:20:45.14:0,45,687	0/0:24,0:24:3.01:0,3,44	0/1:14,0:12:4.36:4,0,142	0/0:26,0:20:59.75:0,60,715	0/1:21,0:20:16.83:17,0,32	0/0:19,0:19:37.65:0,38,521	0/1:14,0:12:9.82:10,0,51	0/1:23,3:26:94.77:95,0,344	0/1:16,1:18:79.68:80,0,232	0/1:14,3:17:81.60:82,0,238	1/1:22,0:22:18.88:80,19,0	0/0:24,0:24:1.17:0,1,211	0/0:24,0:24:23.35:0,23,412	0/0:14,0:14:4.37:0,4,352	0/0:13,0:12:16.51:0,17,299	0/1:16,0:16:0.05:0,0,48	0/0:24,0:23:14.53:0,15,116	0/0:29,0:29:28.79:0,29,254	0/1:19,0:19:3.88:4,0,56	0/1:23,2:25:99:104,0,302	0/0:28,0:29:39.97:0,40,478	0/1:28,0:29:8.88:9,0,495	0/0:24,0:23:16.94:0,17,336	1/1:7,0:7:3.36:16,3,0
chr10	43328766	.	GGTGTGTGTGTGTGTGT	G	7913.01	PASS	AB=0.682;AC=15;AF=0.268;AN=56;BaseQRankSum=2.153;DP=615;FS=0.556;HRun=0;HaplotypeScore=260.1498;InbreedingCoeff=0.8567;MQ=64.53;MQ0=18;MQRankSum=-6.770;QD=45.48;ReadPosRankSum=2.815;VQSLOD=3.6756;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:30:42.13:0,42,1648	0/0:4,0:8:11.97:0,12,781	0/0:35,0:22:9.03:0,9,328	0/0:27,0:18:12.04:0,12,420	0/0:11,0:14:18.06:0,18,738	0/0:18,0:29:24.08:0,24,1568	0/0:20,0:29:35.13:0,35,1600	0/0:30,0:27:30.07:0,30,592	0/0:19,0:21:21.07:0,21,1219	1/1:11,13:25:39.11:1515,39,0	1/1:7,12:20:27.09:1009,27,0	0/0:10,0:21:38.10:0,38,709	0/0:9,0:11:10.28:0,10,221	0/0:5,0:14:20.04:0,20,261	1/1:11,11:22:27.09:1191,27,0	1/1:9,11:21:27.09:1171,27,0	0/0:23,0:29:51.18:0,51,3418	1/1:7,6:13:15.05:662,15,0	0/0:14,0:13:11.52:0,12,202	0/0:12,0:20:29.01:0,29,386	0/0:22,0:22:17.99:0,18,333	0/0:6,0:21:10.64:0,11,741	0/0:13,0:20:26.08:0,26,593	0/0:16,0:25:20.04:0,20,401	1/1:7,10:17:27.09:1191,27,0	1/1:15,11:26:30.08:1147,30,0	0/1:16,0:30:26.32:26,0,99	0/0:4,0:10:13.51:0,14,170
chr10	43334663	.	C	CTG	741.97	PASS	AB=0.811;AC=13;AF=0.250;AN=52;BaseQRankSum=0.718;DP=625;FS=1.696;HRun=0;HaplotypeScore=134.4618;InbreedingCoeff=0.7726;MQ=38.76;MQ0=50;MQRankSum=3.149;QD=3.67;ReadPosRankSum=-0.442;VQSLOD=2.5808;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:32:8.66:0,9,86	0/0:18,0:18:32.88:0,33,480	./.	./.	1/1:17,4:18:5.78:112,6,0	0/0:22,0:22:23.93:0,24,365	0/0:33,0:23:11.69:0,12,180	0/0:27,0:24:72.01:0,72,903	0/0:25,0:24:35.81:0,36,473	0/0:20,0:20:43.30:0,43,535	0/0:16,0:15:17.62:0,18,250	1/1:26,6:25:8.61:162,9,0	0/1:23,7:27:18.21:198,0,18	1/1:19,5:15:8.86:140,9,0	0/0:26,0:23:42.09:0,42,523	0/0:23,0:22:42.57:0,43,515	0/0:29,0:26:35.27:0,35,734	0/0:20,0:18:26.90:0,27,503	0/0:11,0:9:21.06:0,21,299	0/0:15,0:15:20.75:0,21,317	0/0:33,0:21:30.10:0,30,455	1/1:38,5:37:9:103,9,0	1/1:16,7:18:8.89:110,9,0	1/1:27,2:21:5.90:81,6,0	0/0:15,0:14:23.99:0,24,282	0/0:33,0:29:75.10:0,75,958	0/0:12,0:8:26.94:0,27,393	0/0:5,0:4:12.04:0,12,183
chr10	43334667	.	GTC	G	150.35	PASS	AB=1.000;AC=5;AF=0.096;AN=52;BaseQRankSum=5.322;DP=611;FS=0.000;HRun=0;HaplotypeScore=128.3031;InbreedingCoeff=0.5594;MQ=37.96;MQ0=53;MQRankSum=-5.066;QD=1.55;ReadPosRankSum=-0.613;VQSLOD=2.0851;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:39,0:31:0:0,0,0	0/0:18,0:18:26.33:0,26,395	./.	./.	0/0:21,0:18:3.68:0,4,11	0/0:22,0:22:18.33:0,18,278	0/0:32,0:23:11.71:0,12,165	0/0:25,0:22:57.10:0,57,706	0/0:24,0:23:30.09:0,30,442	0/0:20,0:20:39.34:0,39,504	0/0:16,0:15:18.05:0,18,247	1/1:20,11:24:1.81:52,2,0	1/1:18,9:24:3.56:190,4,0	0/0:16,7:14:1.36:0,1,3	0/0:25,0:22:33.10:0,33,474	0/0:24,0:22:25.57:0,26,488	0/0:28,0:25:46.95:0,47,647	0/0:20,0:18:13.52:0,14,397	0/0:10,0:8:21.03:0,21,306	0/0:16,0:15:18.52:0,19,272	0/0:32,0:20:24.08:0,24,372	0/0:22,20:36:7.49:0,7,34	0/0:19,6:20:2.04:0,2,6	0/0:13,15:19:1.25:0,1,3	0/0:14,0:13:15.04:0,15,208	0/0:31,0:28:63.28:0,63,813	0/0:13,0:9:23.49:0,23,344	0/0:5,0:4:11.98:0,12,144
chr10	43334673	.	CTG	C	238.61	PASS	AB=1.000;AC=18;AF=0.346;AN=52;BaseQRankSum=6.160;DP=618;FS=0.000;HRun=0;HaplotypeScore=124.1870;InbreedingCoeff=0.6465;MQ=36.91;MQ0=55;MQRankSum=-1.724;QD=0.81;ReadPosRankSum=-1.679;VQSLOD=2.1551;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:34,2:28:2.78:24,3,0	0/0:13,3:16:24.40:0,24,265	./.	./.	1/1:20,1:18:5.90:37,6,0	0/0:15,6:21:14.89:0,15,190	0/0:35,0:25:8.72:0,9,84	0/0:26,0:22:46.97:0,47,415	0/1:27,0:26:13.44:13,0,247	0/0:21,0:21:23.96:0,24,355	0/0:17,0:16:14.77:0,15,109	1/1:30,0:22:9.85:60,10,0	1/1:29,0:26:19.24:164,19,0	1/1:24,0:15:5.51:38,6,0	0/0:25,0:21:29.50:0,29,267	0/0:26,0:24:30.10:0,30,234	0/1:32,0:29:1.70:2,0,383	0/0:18,0:16:23.12:0,23,298	0/0:11,0:9:21.58:0,22,158	0/0:14,0:13:15.48:0,15,170	0/0:32,0:19:23.93:0,24,189	1/1:44,0:38:5.42:30,5,0	1/1:25,0:20:2.96:19,3,0	1/1:28,0:19:2.96:19,3,0	0/0:15,0:13:15.63:0,16,107	0/0:30,0:27:43.99:0,44,556	0/0:12,0:9:6.28:0,6,231	0/0:3,0:2:6:0,6,71
chr10	43334702	.	TCACACA	T	1519.75	PASS	AB=0.952;AC=25;AF=0.568;AN=44;BaseQRankSum=3.289;DP=564;FS=1.032;HRun=0;HaplotypeScore=127.1163;InbreedingCoeff=0.5318;MQ=35.06;MQ0=51;MQRankSum=-2.403;QD=5.61;ReadPosRankSum=1.311;VQSLOD=2.5903;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:13,0:13:6.48:0,6,94	./.	./.	0/0:15,0:13:2.53:0,3,69	0/0:22,0:22:11.55:0,12,290	0/0:39,0:29:12.68:0,13,271	0/0:17,1:14:0:0,0,0	0/0:24,0:24:8.55:0,9,206	1/1:17,0:16:3.63:110,4,0	1/1:9,6:14:2.96:20,3,0	1/1:18,0:19:6.01:68,6,0	1/1:13,0:17:12.04:172,12,0	0/0:20,0:17:0:0,0,0	1/1:18,2:18:9.03:154,9,0	1/1:8,10:19:15:237,15,0	0/0:31,0:28:41.54:0,42,768	0/1:19,0:18:18.18:251,0,18	1/1:11,2:12:5.94:103,6,0	1/1:10,0:14:5.95:68,6,0	1/1:22,0:14:0.47:1,0,0	1/1:31,0:35:2.71:42,3,0	./.	./.	./.	1/1:23,0:19:9:152,9,0	1/1:12,7:15:15.04:287,15,0	0/0:3,6:8:3.01:0,3,81
chr10	43336485	.	TA	T	2577.18	PASS	AB=0.799;AC=22;AF=0.393;AN=56;BaseQRankSum=13.259;DP=447;FS=98.148;HRun=1;HaplotypeScore=49.4615;InbreedingCoeff=-0.6276;MQ=53.30;MQ0=7;MQRankSum=-8.553;QD=6.89;ReadPosRankSum=-0.614;VQSLOD=-0.5413;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:26,5:28:38.25:38,0,886	0/1:9,3:10:17.68:18,0,290	0/1:9,0:4:9.79:10,0,39	0/1:9,0:6:0.38:0,0,54	0/0:24,3:26:5.32:0,5,525	0/1:11,12:23:99:357,0,367	0/1:10,8:15:99:131,0,323	0/1:24,26:43:99:723,0,744	0/0:5,0:5:9.03:0,9,134	0/1:17,10:24:99:263,0,636	0/1:6,9:13:99:217,0,149	0/0:8,0:8:21.06:0,21,294	0/1:7,3:10:98.16:98,0,216	0/0:7,0:5:12.04:0,12,176	0/1:5,1:6:19.57:20,0,186	0/1:9,6:15:99:164,0,355	0/1:18,0:18:4.87:5,0,362	0/0:19,2:20:5.06:0,5,544	0/1:12,2:13:34.66:35,0,402	0/1:14,4:18:99:111,0,322	0/0:5,0:5:15.03:0,15,203	0/1:2,1:3:30.93:31,0,39	0/1:3,8:11:84.38:261,0,84	0/1:3,3:6:32.84:113,0,33	0/1:12,5:16:89.12:89,0,341	0/1:19,2:20:14.05:14,0,747	0/1:30,2:32:6.36:6,0,825	0/1:8,1:9:24.83:25,0,163
chr10	43339170	.	G	GT	5133.56	PASS	AB=0.778;AC=53;AF=0.946;AN=56;BaseQRankSum=-2.957;DP=142;FS=0.000;HRun=0;HaplotypeScore=28.3139;InbreedingCoeff=0.2074;MQ=50.91;MQ0=0;MQRankSum=-1.526;QD=36.67;ReadPosRankSum=0.491;VQSLOD=3.9395;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,5:5:12.04:191,12,0	1/1:0,2:2:6.02:96,6,0	0/1:5,2:5:10.96:129,0,11	0/0:2,0:1:3.01:0,3,42	1/1:0,5:5:5.95:96,6,0	1/1:1,7:8:21.07:335,21,0	1/1:0,5:5:15:210,15,0	1/1:0,4:3:9.03:144,9,0	1/1:0,5:5:15.05:239,15,0	1/1:0,7:7:21.07:334,21,0	1/1:1,3:4:6.02:90,6,0	1/1:1,4:5:12.04:190,12,0	1/1:2,3:5:9.03:143,9,0	1/1:1,1:2:3.01:48,3,0	1/1:0,7:7:21.07:333,21,0	1/1:2,4:6:17.98:234,18,0	1/1:0,6:6:15.01:211,15,0	1/1:2,3:5:9.10:186,9,0	1/1:1,2:3:9.02:123,9,0	1/1:1,5:6:14.97:238,15,0	1/1:1,2:3:6.02:96,6,0	1/1:0,4:4:9.03:143,9,0	1/1:0,5:5:12.04:190,12,0	1/1:2,2:4:8.94:103,9,0	1/1:2,4:5:15.04:216,15,0	1/1:1,7:8:24.03:333,24,0	1/1:1,7:8:21.03:301,21,0	1/1:1,3:5:12.04:184,12,0
chr10	43339177	.	CT	C	1325.13	PASS	AB=0.626;AC=34;AF=0.607;AN=56;BaseQRankSum=1.095;DP=173;FS=8.837;HRun=13;HaplotypeScore=40.9855;InbreedingCoeff=0.4062;MQ=63.04;MQ0=0;MQRankSum=-4.996;QD=10.77;ReadPosRankSum=2.266;VQSLOD=2.2550;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:3,5:8:17.30:53,0,17	0/0:3,0:3:9.01:0,9,87	0/0:15,0:9:20.85:0,21,175	0/0:5,0:3:5.75:0,6,41	0/0:1,0:5:6.73:0,7,45	0/0:8,0:8:21.03:0,21,204	0/0:5,0:5:15.02:0,15,146	1/1:3,1:3:2.96:22,3,0	0/1:5,1:6:2.34:2,0,127	1/1:2,6:9:1.28:115,1,0	1/1:0,4:4:2.96:22,3,0	1/1:1,5:6:14.90:109,15,0	1/1:1,6:7:11.80:82,12,0	1/1:0,3:3:5.97:44,6,0	1/1:0,8:8:23.86:174,24,0	0/1:3,5:8:11.44:83,0,11	0/0:6,0:6:15.02:0,15,146	1/1:2,4:6:11:86,11,0	1/1:1,2:3:5.95:43,6,0	0/1:2,4:6:4.87:72,0,5	0/0:2,1:3:3:0,3,29	1/1:0,4:4:8.94:65,9,0	1/1:0,5:5:11.92:87,12,0	1/1:0,5:6:8.19:51,8,0	0/1:1,7:7:14.24:72,0,14	0/1:1,7:8:5.30:129,0,5	1/1:0,7:8:19.13:134,19,0	1/1:4,2:6:8.92:63,9,0
chr10	43340784	.	GA	G	403.16	PASS	AB=0.856;AC=9;AF=0.161;AN=56;BaseQRankSum=-6.327;DP=719;FS=8.696;HRun=15;HaplotypeScore=118.5560;InbreedingCoeff=0.5853;MQ=70.69;MQ0=5;MQRankSum=1.826;QD=2.96;ReadPosRankSum=-0.951;VQSLOD=0.2118;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:15,1:58:47.19:0,47,356	1/1:4,7:11:17.56:115,18,0	0/0:38,0:23:12.05:0,12,68	0/1:27,0:13:13.44:13,0,35	0/0:19,0:19:45.42:0,45,227	1/1:5,3:12:11.02:43,11,0	1/1:9,18:30:10.20:231,10,0	0/0:24,0:24:40:0,40,163	0/1:15,7:23:12.93:143,0,13	0/0:36,0:36:66.93:0,67,274	0/0:19,0:19:37.99:0,38,165	0/0:25,1:26:37.83:0,38,259	0/0:30,0:30:76.13:0,76,371	0/0:27,0:27:50.93:0,51,255	0/0:24,0:24:45.65:0,46,188	0/0:20,0:20:42.92:0,43,176	0/1:26,5:33:6.11:6,0,465	0/0:32,0:32:61.57:0,62,252	0/0:31,0:31:61.44:0,61,251	0/0:15,0:15:29.40:0,29,113	0/0:25,0:25:56.36:0,56,232	0/0:17,0:17:36.86:0,37,194	0/0:28,1:29:43.48:0,43,269	0/0:38,1:39:57.20:0,57,352	0/0:19,0:19:32.14:0,32,131	0/0:33,0:33:80.27:0,80,326	0/0:17,0:17:37.56:0,38,154	0/0:5,0:5:8.15:0,8,35
chr10	43340792	.	A	AC	8700.21	PASS	AB=1.000;AC=28;AF=0.500;AN=56;BaseQRankSum=-18.221;DP=721;FS=5.097;HRun=0;HaplotypeScore=92.0994;InbreedingCoeff=0.8617;MQ=68.09;MQ0=5;MQRankSum=1.035;QD=24.65;ReadPosRankSum=3.345;VQSLOD=5.4708;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:60,0:60:64.81:0,65,546	0/0:11,0:11:29.90:0,30,238	0/0:36,0:17:28.15:0,28,255	0/1:32,0:16:6.64:7,0,142	0/1:20,0:20:44.31:55,0,44	0/0:14,0:14:35.84:0,36,283	0/0:32,0:32:80.76:0,81,666	1/1:2,20:22:55.07:642,55,0	0/0:20,0:20:59.78:0,60,494	1/1:0,31:31:93.20:1060,93,0	1/1:0,16:16:41.96:475,42,0	0/0:26,0:26:63.24:0,63,855	0/0:29,0:29:86.35:0,86,1047	0/0:25,0:25:75.01:0,75,866	1/1:0,22:23:50.65:598,51,0	1/1:0,20:20:48.15:587,48,0	0/0:35,0:35:95.94:0,96,1063	1/1:1,29:30:72.18:868,72,0	1/1:2,26:28:67.29:894,67,0	1/1:0,14:14:42:472,42,0	1/1:0,32:32:63.19:766,63,0	0/0:17,0:17:47.94:0,48,584	0/0:25,0:25:71.88:0,72,907	0/0:38,0:38:99:0,105,1242	1/1:2,21:23:36.06:441,36,0	1/1:0,36:36:99:1217,105,0	1/1:0,18:18:42.13:514,42,0	1/1:0,8:8:9.03:105,9,0
chr10	43340795	.	A	AC	551.68	PASS	AB=0.980;AC=9;AF=0.161;AN=56;BaseQRankSum=-1.061;DP=726;FS=0.585;HRun=0;HaplotypeScore=122.7669;InbreedingCoeff=0.4481;MQ=69.35;MQ0=5;MQRankSum=-0.468;QD=3.49;ReadPosRankSum=-4.497;VQSLOD=2.2550;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:60,0:60:64.78:0,65,531	0/0:11,0:11:29.84:0,30,224	0/0:37,0:19:19.02:0,19,232	0/0:32,0:16:12.45:0,12,169	0/0:20,0:20:60.16:0,60,752	0/0:13,0:13:32.24:0,32,217	0/0:33,0:33:85.87:0,86,662	0/0:20,0:20:56.08:0,56,337	0/0:21,0:21:62.33:0,62,483	0/0:30,0:30:81.76:0,82,527	0/0:16,0:16:39.50:0,40,217	1/1:26,1:27:5.57:128,6,0	1/1:26,3:29:3.21:153,3,0	0/1:24,0:24:5.34:142,0,5	0/0:22,0:22:51.97:0,52,293	0/0:21,0:21:48.69:0,49,275	0/0:36,0:36:98.88:0,99,1070	0/0:29,0:29:67.68:0,68,335	0/0:27,0:27:73.24:0,73,471	0/0:14,0:14:24.67:0,25,177	0/0:34,0:34:59.04:0,59,320	0/1:15,1:16:16.08:92,0,16	1/1:26,0:26:1.74:96,2,0	0/1:36,0:36:39.52:75,0,40	0/0:23,0:23:40.71:0,41,240	0/0:40,0:40:99:0,115,760	0/0:21,0:21:48.05:0,48,267	0/0:7,0:7:4.12:0,4,26
chr10	43341758	.	CG	C	10117.69	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=4.586;DP=594;FS=2.174;HRun=8;HaplotypeScore=73.2539;InbreedingCoeff=0.9870;MQ=77.63;MQ0=0;MQRankSum=-1.065;QD=23.92;ReadPosRankSum=4.198;VQSLOD=5.5450;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,33:39:87.13:840,87,0	0/0:12,0:12:36.10:0,36,425	0/0:23,0:20:52.59:0,53,550	0/0:31,0:27:8.27:0,8,314	0/0:8,0:24:36.06:0,36,183	0/0:12,0:12:33.09:0,33,387	0/0:23,0:23:63.18:0,63,748	1/1:2,22:24:66.07:626,66,0	0/0:12,0:12:30.09:0,30,362	1/1:4,25:29:72.11:695,72,0	1/1:1,23:24:66.11:637,66,0	1/1:2,12:14:33.05:318,33,0	1/1:1,14:15:42.07:405,42,0	1/1:1,7:8:21.03:203,21,0	1/1:3,14:17:39.02:376,39,0	1/1:1,15:16:36.05:348,36,0	0/0:33,1:34:61.28:0,61,1007	1/1:0,27:27:69.11:666,69,0	1/1:2,15:17:45.06:430,45,0	1/1:1,23:24:65.91:611,66,0	1/1:4,8:12:21.03:203,21,0	1/1:1,20:21:45.07:434,45,0	1/1:2,25:27:72.11:694,72,0	1/1:1,21:22:54.09:521,54,0	1/1:3,22:25:57.09:550,57,0	1/1:3,22:25:66.09:631,66,0	1/1:1,20:21:54.09:521,54,0	1/1:1,15:16:42.07:405,42,0
chr10	43343693	.	CCA	C	3142.52	PASS	AB=0.879;AC=27;AF=0.482;AN=56;BaseQRankSum=5.659;DP=622;FS=8.794;HRun=0;HaplotypeScore=85.3331;InbreedingCoeff=0.4837;MQ=63.93;MQ0=8;MQRankSum=-0.282;QD=8.10;ReadPosRankSum=-1.213;VQSLOD=2.3272;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:41,4:45:27.80:28,0,879	0/0:11,0:11:27.09:0,27,403	0/0:25,0:14:3.01:0,3,43	0/0:30,0:18:11.95:0,12,128	0/0:6,0:12:6:0,6,51	0/1:24,3:27:40.31:40,0,723	0/0:24,0:24:16.79:0,17,552	1/1:8,6:15:20.88:209,21,0	0/0:19,1:20:7.65:0,8,569	1/1:5,12:17:32.92:351,33,0	1/1:7,5:12:14.78:150,15,0	0/0:10,0:25:27:0,27,253	0/0:7,0:17:39.02:0,39,399	0/0:14,0:32:42.03:0,42,412	0/0:19,0:20:30.20:0,30,624	0/1:12,1:13:1.38:1,0,432	0/1:24,2:27:54.38:54,0,698	0/1:9,11:25:5.22:303,0,5	1/1:7,6:14:20.59:179,21,0	1/1:3,4:7:12.03:138,12,0	1/1:24,37:63:52.97:783,53,0	0/0:7,0:18:21.95:0,22,206	0/1:6,1:12:20.29:29,0,20	0/1:12,1:33:12.30:12,0,405	1/1:6,15:22:23.90:255,24,0	1/1:11,10:22:30.79:315,31,0	1/1:7,13:20:32.92:357,33,0	1/1:5,4:8:12.03:138,12,0
chr10	43343929	.	T	TA	3787.17	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-11.985;DP=603;FS=5.595;HRun=7;HaplotypeScore=61.0806;InbreedingCoeff=0.9767;MQ=71.64;MQ0=0;MQRankSum=0.280;QD=27.64;ReadPosRankSum=4.325;VQSLOD=4.3636;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:34:96.15:0,96,925	0/0:10,0:10:30.05:0,30,290	0/0:21,0:18:32.93:0,33,272	0/0:11,0:10:6.33:0,6,132	0/0:7,0:7:21.02:0,21,197	0/0:21,0:21:54.08:0,54,518	0/0:29,0:29:75.07:0,75,711	0/0:23,0:23:57.08:0,57,550	0/0:24,0:24:69.09:0,69,660	0/0:26,0:26:63.08:0,63,605	0/0:9,0:9:24.03:0,24,231	1/1:1,27:28:75.23:906,75,0	1/1:3,20:23:45.14:544,45,0	1/1:3,15:18:39.12:471,39,0	0/0:30,0:30:78.12:0,78,752	0/0:13,0:13:33.05:0,33,319	0/0:47,0:47:99:0,132,1267	0/0:19,0:19:51.08:0,51,493	0/0:24,0:24:60.07:0,60,570	0/0:9,0:9:27.04:0,27,260	0/0:32,0:32:84.11:0,84,806	1/1:2,20:22:55.41:656,55,0	1/1:1,10:11:17.70:218,18,0	1/1:9,26:35:84.23:992,84,0	0/0:13,0:13:33.05:0,33,317	0/0:24,0:24:66.10:0,66,637	0/0:26,0:26:63.08:0,63,602	0/0:13,0:13:39.06:0,39,377
chr10	43344279	.	G	GGT	3811.06	PASS	AB=0.663;AC=8;AF=0.148;AN=54;BaseQRankSum=-6.295;DP=947;FS=0.424;HRun=0;HaplotypeScore=137.7308;InbreedingCoeff=0.6178;MQ=52.72;MQ0=42;MQRankSum=0.605;QD=19.35;ReadPosRankSum=0.517;VQSLOD=3.8918;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:27:18.87:0,19,94	0/0:9,0:10:23.91:0,24,264	0/0:83,0:8:8.98:0,9,107	0/0:79,0:12:6.90:0,7,71	0/0:26,0:25:33.10:0,33,393	0/0:25,0:26:42.84:0,43,481	0/0:46,0:45:90.26:0,90,1061	0/1:23,14:27:13.83:207,0,14	0/0:25,0:26:23.19:0,23,468	0/0:31,0:31:72.22:0,72,855	0/0:24,0:25:38.95:0,39,439	0/0:43,0:42:68.53:0,69,885	0/0:32,0:32:51.15:0,51,608	0/0:26,0:27:54:0,54,622	0/0:28,0:28:54.16:0,54,640	0/0:29,0:29:58.07:0,58,698	0/0:32,0:32:61.29:0,61,809	0/0:24,0:25:52.94:0,53,554	1/1:17,2:17:13.58:165,14,0	./.	1/1:42,54:94:34.56:2423,35,0	0/0:29,1:31:6.21:0,6,538	0/0:22,0:22:36.04:0,36,428	0/0:23,0:24:41.96:0,42,478	0/0:28,0:28:60:0,60,680	0/0:35,0:36:65.85:0,66,734	0/1:6,12:18:35.42:441,0,35	1/1:10,16:25:6.38:576,6,0
chr10	43344306	.	A	ATG	171.19	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.330;DP=870;FS=17.940;HRun=0;HaplotypeScore=154.0475;InbreedingCoeff=0.8854;MQ=55.21;MQ0=18;MQRankSum=-5.298;QD=10.70;ReadPosRankSum=-1.028;VQSLOD=1.7363;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,9:16:6.27:252,6,0	0/0:15,0:15:27.08:0,27,343	0/0:67,0:17:23.98:0,24,253	0/0:53,0:17:26.37:0,26,261	0/0:25,0:25:56.94:0,57,665	0/0:26,0:26:60.52:0,61,782	0/0:38,0:37:72.23:0,72,902	0/0:38,0:29:67.44:0,67,818	0/0:32,0:32:74.66:0,75,891	0/0:33,0:33:81.23:0,81,990	0/0:21,0:21:50.15:0,50,539	0/0:40,0:40:67.77:0,68,1078	0/0:28,0:28:72.18:0,72,864	0/0:29,0:29:51.33:0,51,864	0/0:30,0:30:75.69:0,76,922	0/0:32,0:32:76.68:0,77,969	0/0:35,0:35:61:0,61,999	0/0:24,0:24:39.92:0,40,672	0/0:21,0:20:41.69:0,42,494	0/0:11,0:11:27.09:0,27,340	0/0:90,1:91:99:0,130,2094	0/0:30,0:30:57.12:0,57,692	0/0:24,0:24:53.86:0,54,657	0/0:22,0:22:54.15:0,54,663	0/0:25,0:25:60.16:0,60,733	0/0:30,0:30:81.24:0,81,1004	0/0:18,0:19:43.84:0,44,538	0/0:13,0:13:36.12:0,36,457
chr10	43344346	.	G	GGGGTGT	391.48	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.072;DP=887;FS=10.461;HRun=0;HaplotypeScore=220.9775;InbreedingCoeff=0.9760;MQ=56.60;MQ0=21;MQRankSum=-3.343;QD=24.47;ReadPosRankSum=-4.630;VQSLOD=1.2472;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,7:16:14.59:480,15,0	0/0:13,0:13:36.11:0,36,834	0/0:48,0:13:25.69:0,26,442	0/0:48,0:18:28.26:0,28,497	0/0:27,0:27:72:0,72,1559	0/0:22,0:24:60.17:0,60,1341	0/0:31,0:31:81.12:0,81,1631	0/0:41,0:40:99:0,114,2134	0/0:34,0:34:96.10:0,96,2206	0/0:32,0:33:96.26:0,96,2068	0/0:23,0:23:60.56:0,61,1189	0/0:40,0:40:99:0,114,2363	0/0:36,0:36:99:0,108,2431	0/0:35,0:35:99:0,99,2073	0/0:39,0:39:99:0,117,2590	0/0:38,0:38:99:0,102,2195	0/0:24,0:24:72.20:0,72,1661	0/0:28,0:28:80.99:0,81,1827	0/0:26,0:22:60:0,60,1140	0/0:20,0:20:54.18:0,54,1259	0/0:98,0:96:99:0,234,4816	0/0:30,0:31:63.13:0,63,1393	0/0:25,0:25:57.13:0,57,1225	0/0:32,0:32:93.26:0,93,2101	0/0:18,0:18:48.15:0,48,1082	0/0:23,0:22:63.18:0,63,1344	0/0:26,0:26:66.08:0,66,1439	0/0:8,0:8:21.07:0,21,490
chr10	43344385	.	ATG	A	636.84	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.312;DP=989;FS=1.673;HRun=0;HaplotypeScore=151.7008;InbreedingCoeff=0.8288;MQ=55.38;MQ0=17;MQRankSum=3.362;QD=24.49;ReadPosRankSum=-1.484;VQSLOD=4.1545;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:92.58:0,93,1467	0/0:14,0:14:38.80:0,39,608	0/0:59,0:17:35.99:0,36,518	0/0:48,0:18:5.77:0,6,180	1/1:9,17:25:60.16:732,60,0	0/0:26,0:26:66.21:0,66,1062	0/0:33,1:34:40.22:0,40,1204	0/0:48,0:43:87.28:0,87,1395	0/0:44,0:44:99:0,105,1700	0/0:39,0:39:99:0,111,1831	0/0:20,0:20:45.10:0,45,686	0/0:36,0:36:93.26:0,93,1426	0/0:36,0:36:93.18:0,93,1450	0/0:36,0:36:90.28:0,90,1420	0/0:44,0:44:99:0,114,1823	0/0:36,0:36:87.25:0,87,1363	0/0:31,0:31:78.24:0,78,1269	0/0:28,0:28:78.27:0,78,1291	0/0:36,0:32:71.68:0,72,1048	0/0:29,0:29:66.76:0,67,1113	0/0:102,3:102:99:0,220,3563	0/0:25,0:25:6.52:0,7,652	0/0:21,0:21:44.97:0,45,734	0/0:42,0:42:99:0,108,1747	0/0:24,0:24:57.16:0,57,912	0/0:25,0:25:63.21:0,63,1026	0/0:27,0:27:63.13:0,63,987	0/0:15,0:15:42.14:0,42,692
chr10	43344526	.	G	GGT	20775.75	PASS	AB=0.690;AC=38;AF=0.679;AN=56;BaseQRankSum=-12.584;DP=1108;FS=2.719;HRun=0;HaplotypeScore=140.6761;InbreedingCoeff=0.5761;MQ=53.53;MQ0=54;MQRankSum=0.361;QD=24.70;ReadPosRankSum=0.820;VQSLOD=5.8432;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:59,0:61:99:0,135,1579	0/0:13,0:13:27.08:0,27,328	0/0:78,0:16:6.30:0,6,98	0/1:77,0:12:21.54:22,0,108	1/1:6,28:32:2.44:1039,2,0	0/0:21,0:21:51.16:0,51,619	0/0:34,0:35:74.70:0,75,828	1/1:21,17:38:48.04:752,48,0	0/0:37,0:38:38.71:0,39,934	1/1:7,30:39:96.32:1520,96,0	0/1:7,16:25:94.45:578,0,94	1/1:12,31:40:8.49:1122,8,0	1/1:12,38:51:71.95:1608,72,0	1/1:6,23:30:54.18:869,54,0	1/1:12,36:49:50.89:1303,51,0	1/1:11,32:43:1.90:1053,2,0	0/0:19,0:19:43.94:0,44,513	0/1:8,16:24:46.27:754,0,46	1/1:13,13:20:39.13:625,39,0	1/1:8,25:34:41.86:1170,42,0	0/1:23,63:86:62.36:1929,0,62	1/1:8,27:34:41.90:1159,42,0	1/1:4,17:18:6.07:593,6,0	1/1:14,44:54:70.41:1158,70,0	1/1:6,24:32:32.78:989,33,0	1/1:10,30:40:17.57:1266,18,0	1/1:7,16:23:14.77:736,15,0	1/1:8,14:22:33.11:532,33,0
chr10	43344663	.	GGT	G	13660.92	PASS	AB=0.774;AC=43;AF=0.768;AN=56;BaseQRankSum=8.671;DP=969;FS=1.201;HRun=0;HaplotypeScore=187.8950;InbreedingCoeff=0.6686;MQ=57.36;MQ0=12;MQRankSum=-0.950;QD=17.70;ReadPosRankSum=3.457;VQSLOD=5.1769;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,47:55:99:1330,100,0	0/1:9,2:11:51.74:52,0,221	0/0:58,0:34:20.02:0,20,502	0/0:49,0:25:42.15:0,42,494	1/1:5,24:30:69.04:815,69,0	0/1:19,3:21:77.15:77,0,442	0/0:22,0:22:54.18:0,54,849	1/1:16,24:41:65.84:732,66,0	0/0:31,1:32:44.83:0,45,1191	1/1:10,32:44:81.02:1107,81,0	0/1:7,15:22:18.32:297,0,18	1/1:13,0:35:61.28:302,61,0	1/1:1,0:39:52.24:299,52,0	1/1:4,0:36:40.23:197,40,0	1/1:9,31:39:84.26:1017,84,0	1/1:12,25:34:81.25:982,81,0	0/0:34,1:36:39.68:0,40,1244	1/1:8,21:29:7.81:754,8,0	1/1:17,16:33:5.53:523,6,0	1/1:3,16:18:45.14:536,45,0	1/1:30,51:80:99:2015,171,0	1/1:4,0:38:39.64:196,40,0	1/1:3,0:25:34.09:168,34,0	1/1:17,0:37:35.71:225,36,0	1/1:3,9:13:23.91:269,24,0	1/1:18,25:44:90.05:1041,90,0	1/1:7,18:25:38.77:473,39,0	1/1:0,10:10:21.06:255,21,0
chr10	43344989	.	CA	C	8221.53	PASS	AB=0.703;AC=39;AF=0.696;AN=56;BaseQRankSum=3.305;DP=527;FS=5.697;HRun=10;HaplotypeScore=60.8303;InbreedingCoeff=0.7603;MQ=85.16;MQ0=0;MQRankSum=-2.782;QD=20.61;ReadPosRankSum=2.362;VQSLOD=6.0005;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,29:30:83.98:729,84,0	0/0:5,0:5:12.03:0,12,133	0/0:24,0:24:20.22:0,20,383	0/1:20,2:21:7.33:7,0,177	0/0:5,0:19:46.25:0,46,258	0/0:25,0:25:63.17:0,63,697	0/0:15,0:16:47.93:0,48,494	1/1:3,24:27:41.78:588,42,0	0/0:15,0:15:33.09:0,33,365	1/1:2,24:26:71.98:625,72,0	1/1:1,17:18:47.98:417,48,0	1/1:3,10:13:26.99:234,27,0	1/1:1,20:21:59.99:521,60,0	1/1:3,19:22:50.98:443,51,0	1/1:1,16:17:44.99:391,45,0	0/1:1,9:10:9.18:158,0,9	0/0:22,2:24:14.09:0,14,611	1/1:0,15:15:35.99:313,36,0	1/1:6,19:25:56.95:494,57,0	1/1:2,14:16:41.99:365,42,0	1/1:0,16:16:41.99:365,42,0	1/1:4,16:20:47.98:417,48,0	1/1:4,20:24:56.99:495,57,0	1/1:0,19:19:41.99:365,42,0	1/1:0,17:17:47.99:417,48,0	1/1:1,16:17:44.98:391,45,0	1/1:2,20:22:53.99:469,54,0	0/1:1,1:2:20.04:20,0,27
chr10	43351553	.	T	TTG	30661.50	PASS	AB=0.571;AC=39;AF=0.696;AN=56;BaseQRankSum=-17.965;DP=1191;FS=8.726;HRun=0;HaplotypeScore=133.4078;InbreedingCoeff=0.8576;MQ=63.46;MQ0=14;MQRankSum=-1.910;QD=33.00;ReadPosRankSum=4.450;VQSLOD=7.1056;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,53:63:69.43:2202,69,0	0/0:15,0:15:39.11:0,39,476	0/0:27,0:17:22.46:0,22,213	0/0:26,0:21:7.23:0,7,204	0/0:19,0:23:59.61:0,60,649	0/0:17,0:17:45.14:0,45,563	0/0:59,0:61:99:0,168,2044	1/1:11,27:38:78.22:1187,78,0	0/0:59,0:60:99:0,162,1953	1/1:11,43:54:99:2047,123,0	1/1:4,17:19:4.61:603,5,0	1/1:8,57:64:90.50:2546,90,0	1/1:10,51:62:99:2294,141,0	1/1:17,50:66:66.42:2152,66,0	1/1:16,49:66:88.90:1989,89,0	1/1:3,49:52:99:2170,132,0	0/0:32,0:33:83.99:0,84,989	0/1:7,21:28:5.81:971,0,6	1/1:2,15:16:45.15:737,45,0	1/1:4,25:29:48.16:791,48,0	1/1:33,99:133:71.13:3822,71,0	1/1:5,34:38:84.29:1386,84,0	1/1:7,17:24:33.11:545,33,0	1/1:10,43:53:88.44:1712,88,0	1/1:7,34:41:81.28:1337,81,0	1/1:12,23:35:0.16:1032,0,0	1/1:3,17:20:42.14:693,42,0	1/1:4,10:14:27.09:446,27,0
chr10	43354906	.	AAAAGG	A	883.89	PASS	AB=0.974;AC=13;AF=0.232;AN=56;BaseQRankSum=3.839;DP=510;FS=1.190;HRun=0;HaplotypeScore=100.4722;InbreedingCoeff=0.4039;MQ=51.26;MQ0=25;MQRankSum=-5.001;QD=6.14;ReadPosRankSum=3.092;VQSLOD=1.7112;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:2:3.01:0,3,68	0/0:13,0:12:24.04:0,24,399	0/0:39,0:14:4.70:0,5,302	0/0:23,0:8:16.87:0,17,226	0/0:17,0:17:34.30:0,34,554	0/0:16,0:15:30.10:0,30,545	0/0:17,0:17:27.09:0,27,563	0/1:12,0:11:0.90:1,0,275	0/0:9,0:8:21.07:0,21,390	0/0:26,0:25:52.38:0,52,649	0/1:10,0:8:3.97:4,0,149	0/1:19,1:19:15.70:174,0,16	1/1:18,0:15:15.08:172,15,0	1/1:19,0:19:0.06:105,0,0	0/0:19,0:18:48.16:0,48,902	0/0:14,0:14:33.08:0,33,584	0/0:32,0:29:69.13:0,69,1668	0/0:20,0:18:41.67:0,42,534	0/0:14,0:14:29.77:0,30,424	0/0:26,0:26:4.05:0,4,643	0/0:14,0:13:18.20:0,18,228	0/1:20,2:21:16.53:283,0,17	1/1:13,1:14:14.89:167,15,0	1/1:18,1:17:11.83:125,12,0	0/0:21,0:20:4.93:0,5,327	0/0:20,0:18:46.31:0,46,537	0/0:21,0:20:35.79:0,36,465	0/1:10,0:9:7.78:8,0,199
chr10	43354907	.	AAAGG	A	1642.97	PASS	AB=1.000;AC=14;AF=0.250;AN=56;BaseQRankSum=0.135;DP=507;FS=0.000;HRun=0;HaplotypeScore=90.7851;InbreedingCoeff=0.7296;MQ=55.47;MQ0=25;MQRankSum=-7.350;QD=13.36;ReadPosRankSum=2.148;VQSLOD=3.1532;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:2:3.01:0,3,54	0/0:13,0:12:21.04:0,21,303	0/0:41,0:16:26.89:0,27,380	0/0:24,0:9:19.41:0,19,243	0/0:18,0:18:33.90:0,34,429	0/0:17,0:16:33.06:0,33,485	0/0:18,0:18:30.10:0,30,488	0/0:12,0:11:10.08:0,10,199	0/0:9,0:8:21.05:0,21,303	0/0:26,0:25:8.03:0,8,420	0/1:9,0:7:5.73:6,0,135	1/1:3,15:17:4.16:272,4,0	1/1:7,10:14:25.62:375,26,0	1/1:4,14:18:17.97:258,18,0	0/0:20,0:19:51.16:0,51,765	0/0:14,0:14:33.99:0,34,484	0/0:32,0:29:69.06:0,69,1385	0/0:19,0:17:41.80:0,42,433	0/0:13,0:13:14.87:0,15,243	0/0:28,0:28:27.21:0,27,643	0/0:13,0:12:18.41:0,18,182	1/1:7,15:21:32.45:478,32,0	1/1:2,10:12:15.01:225,15,0	1/1:4,13:15:12.04:188,12,0	0/0:21,0:20:23.33:0,23,283	0/0:21,0:18:39.65:0,40,414	0/0:20,0:19:13.95:0,14,315	0/1:10,0:9:21.97:22,0,144
chr10	43354909	.	A	AAG	2012.24	PASS	AB=1.000;AC=27;AF=0.482;AN=56;BaseQRankSum=-3.849;DP=511;FS=0.000;HRun=0;HaplotypeScore=79.8246;InbreedingCoeff=0.6361;MQ=57.12;MQ0=23;MQRankSum=6.604;QD=6.29;ReadPosRankSum=0.670;VQSLOD=2.3682;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:2:2.88:0,3,15	0/0:12,0:11:9.25:0,9,90	0/1:42,0:17:1.95:2,0,105	0/1:23,0:9:9.02:9,0,75	1/1:7,8:17:19.64:137,20,0	0/0:17,0:16:32.03:0,32,234	0/0:18,0:18:26.44:0,26,208	0/1:17,0:16:1.05:73,0,1	0/0:11,0:10:26.68:0,27,201	1/1:26,0:26:39.76:350,40,0	1/1:9,0:7:9.98:75,10,0	0/0:17,0:16:18.18:0,18,77	0/0:16,0:14:24.26:0,24,105	0/0:17,0:17:15.87:0,16,66	0/1:20,0:19:16.01:121,0,16	0/1:15,0:15:14.51:78,0,15	0/0:30,0:28:65.21:0,65,605	1/1:21,0:19:34.19:179,34,0	1/1:13,0:13:16.56:116,17,0	1/1:26,0:27:43.92:330,44,0	1/1:13,0:12:14.26:87,14,0	0/0:19,0:18:27.18:0,27,121	0/0:12,0:12:13.86:0,14,62	0/0:17,0:15:11.14:0,11,50	1/1:24,0:23:24.80:178,25,0	1/1:21,0:18:38.18:314,38,0	1/1:20,0:19:14.01:110,14,0	1/1:10,0:9:3.94:58,4,0
chr10	43355897	.	AG	A	6907.21	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=16.058;DP=814;FS=10.663;HRun=2;HaplotypeScore=84.3737;InbreedingCoeff=0.9999;MQ=85.48;MQ0=0;MQRankSum=-4.725;QD=33.86;ReadPosRankSum=2.580;VQSLOD=4.5813;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,34:34:90.29:1141,90,0	0/0:13,0:13:36.12:0,36,539	0/0:26,0:26:75.19:0,75,1063	0/0:26,0:26:75.25:0,75,1110	0/0:23,0:23:63.21:0,63,944	0/0:24,0:24:72.24:0,72,1079	0/0:28,0:28:84.27:0,84,1238	0/0:55,0:55:99:0,166,2453	0/0:40,0:40:99:0,120,1795	0/0:28,0:28:84.28:0,84,1249	0/0:17,0:17:51.17:0,51,758	1/1:0,28:28:75.24:974,75,0	1/1:0,30:30:75.04:974,75,0	1/1:1,27:28:75.24:974,75,0	0/0:37,0:37:99:0,111,1662	0/0:29,0:29:87.29:0,87,1303	0/0:34,0:34:99:0,102,1505	0/0:32,0:32:96.33:0,96,1439	0/0:17,0:17:51.17:0,51,765	0/0:31,0:31:93.30:0,93,1374	0/0:38,0:38:99:0,114,1686	1/1:1,30:31:87.28:1130,87,0	1/1:1,15:16:39.13:507,39,0	1/1:1,36:37:93.30:1208,93,0	0/0:29,0:29:84.28:0,84,1256	0/0:34,0:34:99:0,102,1507	0/0:37,0:37:99:0,111,1657	0/0:12,0:12:36.12:0,36,540
chr10	43355901	.	GTTC	G	1077.15	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=8.252;DP=809;FS=2.738;HRun=0;HaplotypeScore=138.2784;InbreedingCoeff=0.9988;MQ=84.66;MQ0=0;MQRankSum=-7.840;QD=32.64;ReadPosRankSum=-0.504;VQSLOD=4.0660;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,29:33:72.25:1172,72,0	0/0:12,0:12:36.12:0,36,816	0/0:25,0:25:72.18:0,72,1416	0/0:25,0:25:75.26:0,75,1638	0/0:22,0:22:66.19:0,66,1407	0/0:23,0:23:66.23:0,66,1496	0/0:29,0:29:81.26:0,81,1793	0/0:56,0:56:99:0,154,3388	0/0:38,0:38:99:0,114,2540	0/0:29,0:29:84.29:0,84,1906	0/0:17,0:17:48.16:0,48,1072	0/0:28,0:28:75.23:0,75,1598	0/0:30,0:30:78.25:0,78,1763	0/0:27,0:27:78.26:0,78,1722	0/0:36,0:36:99:0,105,2337	0/0:31,0:31:93.30:0,93,2012	0/0:35,0:35:99:0,105,2360	0/0:30,0:30:78.23:0,78,1703	0/0:17,0:17:48.16:0,48,1047	0/0:31,0:31:90.30:0,90,1994	0/0:39,0:39:99:0,117,2651	0/0:30,0:30:84.27:0,84,1838	0/0:15,0:15:41.58:0,42,938	0/0:39,0:39:99:0,99,2236	0/0:29,0:29:85.17:0,85,1904	0/0:35,0:35:99:0,102,2312	0/0:36,0:36:99:0,108,2440	0/0:12,0:12:27.09:0,27,594
chr10	43356473	.	CA	C	5471.68	PASS	AB=0.858;AC=32;AF=0.571;AN=56;BaseQRankSum=10.273;DP=578;FS=5.235;HRun=11;HaplotypeScore=65.0042;InbreedingCoeff=0.5887;MQ=78.92;MQ0=0;MQRankSum=-1.470;QD=14.99;ReadPosRankSum=0.310;VQSLOD=5.2659;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:34:74.32:0,74,810	0/1:6,1:7:3.60:4,0,164	0/1:17,2:19:26.30:26,0,104	0/1:9,1:10:13.75:14,0,103	0/0:20,1:21:17.92:0,18,385	0/0:18,1:20:23.29:0,23,424	0/0:20,0:20:48.06:0,48,475	1/1:2,32:35:94.92:769,95,0	0/0:12,0:12:33.05:0,33,330	1/1:5,15:20:41.94:345,42,0	1/1:3,6:10:17:129,17,0	0/1:13,4:17:31.84:32,0,304	0/1:10,2:13:19.34:19,0,202	0/0:22,1:23:30.73:0,31,515	1/1:5,26:32:73.79:597,74,0	1/1:6,12:18:32.94:271,33,0	0/0:30,0:30:57.07:0,57,714	1/1:4,27:31:77.90:640,78,0	1/1:3,17:22:54.98:425,55,0	1/1:4,13:19:36.99:283,37,0	1/1:2,14:16:35.95:296,36,0	0/0:20,0:20:48.09:0,48,492	0/1:9,2:11:16.21:16,0,248	0/0:32,0:33:81.01:0,81,831	1/1:3,10:14:29:228,29,0	1/1:3,17:21:52.94:421,53,0	1/1:3,23:26:59.92:493,60,0	1/1:4,18:23:58.84:465,59,0
chr10	43357360	.	GCA	G	2353.47	PASS	AB=0.803;AC=14;AF=0.259;AN=54;BaseQRankSum=0.516;DP=592;FS=0.000;HRun=0;HaplotypeScore=117.2246;InbreedingCoeff=0.3057;MQ=58.90;MQ0=7;MQRankSum=5.805;QD=10.46;ReadPosRankSum=5.629;VQSLOD=2.7151;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:3,0:39:8.24:0,8,174	0/1:5,2:7:22.40:22,0,127	0/1:24,1:17:4.11:4,0,255	0/0:20,0:14:8.82:0,9,102	0/0:12,0:21:7.27:0,7,29	0/1:21,1:22:4.40:4,0,385	0/1:19,1:20:4.35:4,0,362	0/0:16,0:14:14.93:0,15,148	0/0:18,0:19:36.10:0,36,513	0/0:28,0:24:48.17:0,48,454	0/0:16,0:16:3:0,3,28	1/1:6,16:23:38.94:427,39,0	1/1:6,19:24:1.56:470,2,0	0/1:7,17:27:21.35:354,0,21	0/0:23,0:23:3.22:0,3,13	0/0:14,0:14:20.98:0,21,180	0/0:40,1:41:52.82:0,53,1199	0/0:15,0:13:16.32:0,16,141	0/0:16,0:16:21.37:0,21,128	0/0:19,0:19:3.39:0,3,68	./.	0/1:9,18:27:41.79:466,0,42	1/1:5,10:15:18.05:207,18,0	1/1:8,23:33:53.03:552,53,0	0/0:23,0:20:9.59:0,10,85	0/0:23,0:21:42.21:0,42,318	0/0:12,0:10:11.12:0,11,69	0/0:5,0:5:5.93:0,6,40
chr10	43357389	.	CG	C	4292.35	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=4.510;DP=505;FS=2.415;HRun=1;HaplotypeScore=96.9462;InbreedingCoeff=0.9306;MQ=60.98;MQ0=6;MQRankSum=-3.666;QD=24.53;ReadPosRankSum=-0.622;VQSLOD=4.6442;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:50.14:0,50,633	0/0:9,0:9:24.05:0,24,337	0/0:27,0:19:54.06:0,54,768	0/0:18,0:10:24.06:0,24,341	0/0:11,0:11:18.68:0,19,166	0/0:14,0:14:42.12:0,42,641	0/0:20,0:20:54:0,54,804	1/1:1,13:14:39.13:544,39,0	0/0:14,0:14:39.10:0,39,558	1/1:2,16:16:28.28:567,28,0	1/1:1,10:11:2.07:40,2,0	0/0:23,0:23:56.96:0,57,615	0/0:27,0:26:64.67:0,65,693	0/0:27,0:27:62.92:0,63,620	1/1:0,9:10:5.09:116,5,0	1/1:1,8:13:26.10:264,26,0	0/0:42,0:42:99:0,118,1848	1/1:2,8:10:21.03:268,21,0	1/1:1,12:13:33.11:453,33,0	1/1:1,13:16:18.60:379,19,0	1/1:0,12:8:12.04:167,12,0	0/0:25,0:24:63.03:0,63,687	0/0:14,0:14:26.96:0,27,294	0/0:31,0:31:66.02:0,66,685	1/1:1,10:15:15.20:207,15,0	1/1:2,24:23:63.68:879,64,0	1/1:0,11:10:24.08:325,24,0	1/1:0,4:4:6.02:84,6,0
chr10	43357866	.	AG	A	3661.08	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=11.566;DP=718;FS=0.000;HRun=6;HaplotypeScore=72.7890;InbreedingCoeff=0.9920;MQ=94.39;MQ0=0;MQRankSum=-5.638;QD=27.74;ReadPosRankSum=4.150;VQSLOD=4.1531;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:58:99:0,144,1863	0/0:6,0:6:12.04:0,12,158	0/0:40,0:40:99:0,105,1292	0/0:30,0:30:38.47:0,38,792	0/0:19,0:19:48.15:0,48,618	0/0:11,0:11:33.10:0,33,420	0/0:25,0:25:72.21:0,72,927	0/0:41,0:41:99:0,99,1244	0/0:26,0:26:75.21:0,75,935	0/0:23,0:23:66.20:0,66,840	0/0:16,0:16:45.14:0,45,579	1/1:1,25:26:66.16:709,66,0	1/1:1,16:17:45.11:483,45,0	1/1:0,33:33:93.23:999,93,0	0/0:32,0:32:90.29:0,90,1178	0/0:27,0:27:81.25:0,81,1048	0/0:26,0:26:69.20:0,69,878	0/0:30,0:30:87.27:0,87,1126	0/0:24,0:24:63.17:0,63,784	0/0:21,0:21:54.12:0,54,658	0/0:35,0:35:96.28:0,96,1217	1/1:1,17:18:39.04:406,39,0	1/1:2,11:13:33.08:354,33,0	1/1:2,23:25:66.17:709,66,0	0/0:28,0:28:75.21:0,75,946	0/0:26,0:26:69.17:0,69,840	0/0:32,0:32:90.27:0,90,1154	0/0:10,0:10:18.06:0,18,237
chr10	43358699	.	CTG	C	3697.37	PASS	AB=1.000;AC=38;AF=0.704;AN=54;BaseQRankSum=-1.025;DP=444;FS=4.084;HRun=0;HaplotypeScore=74.1297;InbreedingCoeff=0.5546;MQ=76.55;MQ0=1;MQRankSum=-0.936;QD=11.14;ReadPosRankSum=4.384;VQSLOD=3.1386;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:15,0:15:0:0,0,0	./.	0/0:24,0:24:31.46:0,31,407	0/0:17,0:15:16.14:0,16,315	1/1:11,0:11:8.59:58,9,0	0/0:15,0:15:24.07:0,24,276	0/0:29,0:29:57.07:0,57,644	1/1:3,11:14:33.01:346,33,0	1/1:11,0:11:2.59:25,3,0	1/1:22,0:22:12.19:104,12,0	1/1:10,0:9:16.05:69,16,0	1/1:14,0:14:3.89:47,4,0	1/1:7,0:7:3:27,3,0	1/1:7,0:7:5.86:51,6,0	0/1:14,0:14:19.37:61,0,19	1/1:24,0:24:44.47:183,44,0	0/1:18,0:18:19.47:19,0,77	1/1:14,0:14:34.32:150,34,0	1/1:14,4:18:30.04:318,30,0	1/1:2,8:10:30.04:359,30,0	1/1:9,26:34:53.66:652,54,0	1/1:13,0:13:2.15:25,2,0	0/0:7,0:7:6.02:0,6,72	0/0:14,0:14:14.98:0,15,123	1/1:24,0:24:27.91:174,28,0	0/1:17,0:17:10.05:66,0,10	1/1:2,17:19:48.11:587,48,0	1/1:4,11:15:30.10:378,30,0
chr10	43360487	.	G	GTTA	8203.27	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-14.003;DP=795;FS=0.000;HRun=0;HaplotypeScore=105.3554;InbreedingCoeff=0.9995;MQ=66.24;MQ0=6;MQRankSum=-1.742;QD=53.97;ReadPosRankSum=4.527;VQSLOD=6.8703;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:63.13:0,63,1005	0/0:18,0:18:54.14:0,54,838	0/0:43,0:28:59.56:0,60,994	0/0:46,0:33:61.44:0,61,1200	0/0:25,0:25:69.18:0,69,1089	0/0:21,0:21:63.08:0,63,954	0/0:28,0:28:75.10:0,75,1078	0/0:38,0:38:99:0,105,1510	0/0:25,0:25:75.24:0,75,1239	0/0:25,0:25:69.16:0,69,1022	0/0:28,0:28:81.24:0,81,1319	1/1:0,26:26:72.25:1639,72,0	1/1:1,15:16:39.13:895,39,0	1/1:1,18:19:39.13:896,39,0	0/0:32,0:32:93.18:0,93,1343	0/0:27,0:26:78.14:0,78,1190	0/0:45,0:45:99:0,132,2031	0/0:31,0:31:87.15:0,87,1311	0/0:28,0:28:81.07:0,81,1126	0/0:29,0:29:78.22:0,78,1229	0/0:14,0:14:42.05:0,42,554	1/1:0,20:20:54.10:1189,54,0	1/1:0,30:31:68.96:1430,69,0	1/1:1,37:40:96.33:2154,96,0	0/0:29,0:29:87.19:0,87,1291	0/0:42,0:42:99:0,117,1802	0/0:32,0:32:96.20:0,96,1463	0/0:8,0:8:24:0,24,297
chr10	43360507	.	GT	G	730.26	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.354;DP=770;FS=2.641;HRun=5;HaplotypeScore=96.4366;InbreedingCoeff=0.9904;MQ=59.01;MQ0=11;MQRankSum=2.050;QD=21.48;ReadPosRankSum=0.155;VQSLOD=2.5304;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,31:34:69.21:825,69,0	0/0:14,0:14:39.10:0,39,524	0/0:42,0:14:20.57:0,21,408	0/0:43,0:20:30.77:0,31,454	0/0:27,0:27:75.24:0,75,1032	0/0:22,0:22:57.16:0,57,776	0/0:30,0:30:84.28:0,84,1173	0/0:36,0:36:96.30:0,96,1304	0/0:26,0:26:78.26:0,78,1088	0/0:24,0:24:69.23:0,69,955	0/0:25,0:25:72.23:0,72,987	0/0:21,0:21:57.19:0,57,797	0/0:17,0:17:45.15:0,45,622	0/0:16,0:16:42.14:0,42,585	0/0:29,0:29:87.28:0,87,1200	0/0:26,0:25:75.25:0,75,1049	0/0:49,0:49:99:0,141,1904	0/0:33,0:33:99:0,99,1312	0/0:24,0:22:60.18:0,60,812	0/0:24,0:24:72.24:0,72,1003	0/0:11,0:11:30.10:0,30,420	0/0:22,0:22:54.18:0,54,755	0/0:27,0:27:69.23:0,69,963	0/0:44,0:45:99:0,106,1469	0/0:30,0:30:83.77:0,84,1142	0/0:31,0:31:84.28:0,84,1166	0/0:34,0:34:99:0,102,1420	0/0:7,0:7:20.94:0,21,267
chr10	43360930	.	T	TG	11796.72	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=9.875;DP=505;FS=6.247;HRun=1;HaplotypeScore=201.8275;InbreedingCoeff=0.9708;MQ=70.25;MQ0=0;MQRankSum=-11.607;QD=26.87;ReadPosRankSum=4.149;VQSLOD=4.4222;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,26:31:76.80:757,77,0	1/1:1,7:8:24.02:228,24,0	0/0:21,0:19:53.92:0,54,676	0/0:19,0:19:54.11:0,54,669	1/1:1,16:17:47.73:421,48,0	1/1:2,10:12:29.51:289,30,0	1/1:1,19:20:60:560,60,0	1/1:0,22:22:66.10:660,66,0	1/1:5,22:27:81.08:776,81,0	1/1:0,16:16:44.21:419,44,0	1/1:1,7:8:23.96:228,24,0	1/1:1,22:24:68.86:670,69,0	1/1:2,20:22:63.02:596,63,0	1/1:1,15:16:38.21:398,38,0	1/1:0,29:29:87.11:851,87,0	1/1:4,23:27:73.99:719,74,0	0/0:26,0:26:78.21:0,78,1038	1/1:2,7:9:16.68:221,17,0	1/1:0,11:11:30.06:335,30,0	1/1:2,15:17:50.82:458,51,0	1/1:3,7:10:11.31:165,11,0	1/1:3,9:12:36.04:364,36,0	1/1:0,23:23:56.77:518,57,0	1/1:0,13:13:32.37:273,32,0	1/1:3,15:18:54.08:553,54,0	1/1:4,20:24:72.16:763,72,0	1/1:3,16:19:47.34:454,47,0	1/1:0,4:4:12.03:122,12,0
chr10	43360933	.	T	TCAG	17137.06	PASS	AB=1.000;AC=48;AF=0.857;AN=56;BaseQRankSum=9.700;DP=505;FS=3.029;HRun=0;HaplotypeScore=194.7068;InbreedingCoeff=0.6080;MQ=71.70;MQ0=0;MQRankSum=-11.648;QD=39.13;ReadPosRankSum=8.256;VQSLOD=5.4015;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:30,1:31:9.18:1028,9,0	1/1:8,0:8:24.08:366,24,0	0/0:24,0:22:60.19:0,60,1036	0/0:18,0:18:50.02:0,50,819	0/1:17,0:17:17.08:502,0,17	1/1:13,0:13:33.11:544,33,0	1/1:19,0:19:38.02:842,38,0	1/1:20,0:20:48.34:833,48,0	1/1:25,1:26:57.23:1085,57,0	1/1:14,0:14:33:559,33,0	1/1:9,0:9:27.05:392,27,0	1/1:25,0:25:62.18:1030,62,0	1/1:21,0:21:63.21:999,63,0	1/1:16,0:16:35:625,35,0	1/1:30,0:30:90.12:1398,90,0	1/1:28,0:28:63.74:1229,64,0	0/0:25,0:25:72.25:0,72,1342	1/1:9,2:11:18.10:396,18,0	1/1:10,0:10:2.24:270,2,0	0/1:17,0:17:15.88:528,0,16	1/1:12,0:12:14.54:368,15,0	1/1:12,0:12:3.31:363,3,0	1/1:21,0:21:11.11:687,11,0	1/1:13,0:13:25.48:463,25,0	1/1:18,0:18:32.95:696,33,0	1/1:24,0:24:45.20:967,45,0	1/1:16,2:19:31.99:784,32,0	1/1:4,0:4:12.04:184,12,0
chr10	43360934	.	T	TCAGC	32025.03	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=9.622;DP=601;FS=3.811;HRun=0;HaplotypeScore=203.3529;InbreedingCoeff=0.9863;MQ=69.89;MQ0=0;MQRankSum=-12.586;QD=60.54;ReadPosRankSum=2.293;VQSLOD=5.7902;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,25:35:81.23:1791,81,0	1/1:1,7:9:27.09:642,27,0	0/0:27,0:25:63.19:0,63,1213	0/0:20,0:20:49.02:0,49,909	1/1:6,15:22:42.14:920,42,0	1/1:8,10:18:45.11:1031,45,0	1/1:10,19:29:84.29:2046,84,0	1/1:9,17:26:78.22:1839,78,0	1/1:8,21:29:84.25:1883,84,0	1/1:10,12:22:60.20:1346,60,0	1/1:4,7:11:30.10:629,30,0	1/1:9,23:32:87.25:2020,87,0	1/1:4,20:24:72.25:1687,72,0	1/1:5,11:16:45.15:1026,45,0	1/1:4,27:31:93.30:2133,93,0	1/1:6,23:29:84.29:2013,84,0	0/0:25,0:25:72.25:0,72,1510	1/1:5,6:11:24.08:572,24,0	1/1:3,6:9:21.07:522,21,0	1/1:6,15:21:45.15:1072,45,0	1/1:10,7:17:33.08:732,33,0	1/1:11,9:20:48.14:1100,48,0	1/1:4,17:21:51.15:1126,51,0	1/1:5,13:18:36.12:859,36,0	1/1:7,15:22:57.19:1341,57,0	1/1:7,20:27:75.26:1811,75,0	1/1:10,16:26:66.23:1589,66,0	1/1:0,4:4:12.04:294,12,0
chr10	43361391	.	ATGTGTGTGTGTGTGTGTGTGTG	A	4839.09	PASS	AC=12;AF=0.222;AN=54;BaseQRankSum=8.564;DP=690;FS=4.614;HRun=0;HaplotypeScore=346.7491;InbreedingCoeff=0.8657;MQ=56.83;MQ0=16;MQRankSum=-7.782;QD=34.81;ReadPosRankSum=2.284;VQSLOD=2.7733;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:27:39.13:0,39,1924	0/0:11,0:15:12.04:0,12,695	./.	0/0:30,0:11:3.01:0,3,74	0/0:12,0:12:15.03:0,15,1192	0/0:18,0:18:32.87:0,33,2874	0/0:33,0:33:48.15:0,48,2904	0/0:26,0:26:33.47:0,33,1149	0/0:27,0:27:51.17:0,51,3597	0/0:36,0:36:56.99:0,57,4394	0/0:8,0:8:6.91:0,7,409	1/1:19,10:30:18.06:1022,18,0	1/1:18,9:28:23.94:1322,24,0	1/1:13,9:23:18.06:1023,18,0	0/0:27,0:30:17.93:0,18,787	0/0:20,0:20:36.12:0,36,2519	0/0:28,0:42:57.20:0,57,4069	0/0:19,0:29:39.13:0,39,2495	0/0:22,0:21:24.05:0,24,1043	0/0:15,0:15:15.05:0,15,1119	0/0:57,0:56:78.24:0,78,5939	1/1:10,6:17:24.08:1100,24,0	1/1:12,0:11:3:25,3,0	1/1:20,7:26:6.02:348,6,0	0/0:22,0:21:30.10:0,30,2867	0/0:31,0:30:55.74:0,56,3242	0/0:9,0:14:14.07:0,14,1046	0/0:16,0:15:21.07:0,21,1453
chr10	43362264	.	ACTT	A	1504.91	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.845;DP=620;FS=2.244;HRun=0;HaplotypeScore=84.5273;InbreedingCoeff=0.9969;MQ=85.40;MQ0=0;MQRankSum=-5.431;QD=35.00;ReadPosRankSum=2.193;VQSLOD=4.3460;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,40:43:99:1600,102,0	0/0:11,0:11:30.08:0,30,617	0/0:17,0:17:51.18:0,51,1098	0/0:25,0:25:69.24:0,69,1405	0/0:18,0:18:42.13:0,42,864	0/0:18,0:18:51.12:0,51,1032	0/0:35,0:35:93.32:0,93,2053	0/0:27,0:27:69.24:0,69,1489	0/0:18,0:18:48.14:0,48,979	0/0:27,0:27:78.26:0,78,1618	0/0:12,0:12:33.11:0,33,728	0/0:26,0:26:75.26:0,75,1637	0/0:16,0:16:39.13:0,39,822	0/0:20,0:20:54.13:0,54,1127	0/0:14,0:14:42.14:0,42,913	0/0:12,0:12:36.12:0,36,780	0/0:28,0:28:84.27:0,84,1813	0/0:26,0:26:75.26:0,75,1636	0/0:14,0:14:39.10:0,39,711	0/0:22,0:22:66.17:0,66,1365	0/0:46,0:46:99:0,135,2874	0/0:21,0:21:63.22:0,63,1373	0/0:18,0:18:51.14:0,51,1080	0/0:31,0:31:93.28:0,93,2007	0/0:20,0:20:60.21:0,60,1309	0/0:24,0:24:72.25:0,72,1558	0/0:23,0:22:69.23:0,69,1445	0/0:8,0:8:24.07:0,24,487
chr10	43363693	.	C	CT	5343.84	PASS	AB=0.570;AC=23;AF=0.411;AN=56;BaseQRankSum=-11.876;DP=670;FS=21.872;HRun=10;HaplotypeScore=73.2495;InbreedingCoeff=0.7218;MQ=75.92;MQ0=3;MQRankSum=-1.380;QD=18.56;ReadPosRankSum=1.147;VQSLOD=3.8129;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,2:48:90.79:0,91,939	0/0:10,0:11:25.98:0,26,199	0/0:42,0:24:8.59:0,9,203	0/0:34,1:27:25.98:0,26,166	0/0:26,0:27:70.66:0,71,545	0/0:22,0:22:59.83:0,60,477	0/0:21,1:22:21.91:0,22,380	1/1:17,20:39:43.38:526,43,0	0/0:14,0:14:32.95:0,33,271	1/1:6,18:25:27.75:538,28,0	0/1:3,7:11:18.04:180,0,18	0/0:16,0:17:46.96:0,47,372	0/0:22,2:24:21.80:0,22,369	0/0:18,0:18:41.90:0,42,338	1/1:4,19:23:51.02:523,51,0	1/1:2,19:22:32.36:534,32,0	0/0:23,0:23:53.94:0,54,420	0/1:5,22:28:31.60:463,0,32	1/1:6,11:19:25.79:271,26,0	0/1:6,15:21:25.84:354,0,26	1/1:6,8:15:26.90:270,27,0	0/0:22,1:23:24.90:0,25,404	0/0:32,0:32:67.88:0,68,541	0/0:21,0:21:53.91:0,54,439	1/1:5,15:20:4.75:347,5,0	1/1:5,21:26:38.58:587,39,0	1/1:4,20:24:31.59:520,32,0	1/1:2,12:14:2.43:231,2,0
chr10	43364629	.	C	CGTGTGTGTGTGTGT	6263.86	PASS	AB=0.905;AC=32;AF=0.615;AN=52;BaseQRankSum=2.346;DP=665;FS=4.707;HRun=0;HaplotypeScore=241.3972;InbreedingCoeff=0.4681;MQ=61.77;MQ0=1;MQRankSum=-8.862;QD=14.60;ReadPosRankSum=-4.612;VQSLOD=2.6785;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:28:11.93:264,12,0	0/0:16,0:16:11.68:0,12,653	./.	0/0:23,0:17:3.33:0,3,71	0/0:12,0:12:0.94:0,1,2	0/0:17,0:20:42.02:0,42,1364	0/0:44,0:51:93.27:0,93,2966	1/1:37,0:35:24.08:566,24,0	0/0:21,0:23:48.16:0,48,1607	0/1:26,0:26:99:134,0,413	0/0:12,0:12:5.95:0,6,116	1/1:5,20:34:21.54:1314,22,0	1/1:4,12:27:23.77:1244,24,0	1/1:8,1:34:7.58:508,8,0	1/1:17,0:17:2.20:81,2,0	1/1:8,0:8:6.02:265,6,0	0/0:14,0:17:24.04:0,24,781	0/1:13,0:13:99:182,0,128	1/1:26,0:26:32.99:654,33,0	1/1:10,0:11:2.51:6,3,0	./.	0/1:13,0:34:0:0,0,0	1/1:5,0:19:3.43:153,3,0	1/1:16,12:40:1.49:48,1,0	1/1:19,0:19:6.02:117,6,0	0/1:19,0:19:99:208,0,432	1/1:22,0:21:12.04:478,12,0	1/1:10,0:14:3.01:40,3,0
chr10	43364649	.	T	TGCGCGCGCGCGCGCGC	5840.58	PASS	AB=0.950;AC=23;AF=0.411;AN=56;BaseQRankSum=4.466;DP=536;FS=3.058;HRun=0;HaplotypeScore=221.1823;InbreedingCoeff=0.1421;MQ=59.34;MQ0=2;MQRankSum=-5.502;QD=20.28;ReadPosRankSum=3.262;VQSLOD=3.8337;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:24:92.10:104,0,92	0/0:13,0:13:39.09:0,39,1441	0/0:27,0:14:29.94:0,30,691	0/0:15,0:10:16.85:0,17,267	0/0:9,0:9:4.35:0,4,27	0/0:22,0:22:60.18:0,60,2401	0/0:54,0:54:99:0,150,5480	0/0:21,0:19:8.90:0,9,129	0/0:20,0:20:57.04:0,57,1900	1/1:5,3:26:29.76:727,30,0	1/1:8,0:8:8.50:152,8,0	0/1:24,0:24:99:204,0,981	0/1:25,0:25:99:179,0,465	0/1:27,0:27:59.24:59,0,332	1/1:6,0:5:2.15:158,2,0	1/1:7,0:7:6.02:363,6,0	0/0:12,0:12:30.10:0,30,1374	0/1:10,1:11:90.14:1259,0,90	0/1:19,0:19:99:595,0,126	0/1:12,0:12:0.27:0,0,0	1/1:18,0:18:2.54:24,3,0	0/0:27,0:27:12.04:0,12,407	0/1:16,0:16:10.80:11,0,297	0/0:28,0:28:15.03:0,15,338	1/1:2,3:18:6.02:424,6,0	0/1:2,3:17:99:862,0,100	0/1:19,0:18:0.67:540,0,1	0/1:11,0:11:26.63:179,0,27
chr10	43364651	.	T	TGCGCGCGCGCGCGC	7836.15	PASS	AB=0.963;AC=29;AF=0.518;AN=56;BaseQRankSum=4.821;DP=540;FS=6.578;HRun=0;HaplotypeScore=215.7920;InbreedingCoeff=0.3478;MQ=58.76;MQ0=2;MQRankSum=-9.963;QD=24.49;ReadPosRankSum=0.534;VQSLOD=3.3854;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:22,6:29:14.77:163,0,15	0/0:13,0:13:30.10:0,30,1171	0/0:25,0:13:27.05:0,27,626	0/0:15,0:11:11.37:0,11,163	0/0:3,0:8:1.28:0,1,2	0/0:21,0:21:57.20:0,57,2138	0/0:56,0:56:99:0,144,4944	1/1:23,0:21:20.34:230,20,0	0/0:22,0:22:48.15:0,48,1634	1/1:13,0:13:24.06:720,24,0	1/1:10,0:10:2.03:121,2,0	0/1:24,0:24:99:409,0,928	0/1:25,0:25:99:365,0,475	0/1:22,0:22:99:132,0,294	1/1:9,0:12:2.03:177,2,0	1/1:6,0:11:6.02:364,6,0	0/0:15,0:15:33.08:0,33,1200	0/1:13,0:14:80.33:1343,0,80	1/1:21,2:25:41.95:1324,42,0	1/1:10,0:18:1.13:5,1,0	1/1:19,0:19:7.90:88,8,0	0/0:19,0:19:12.04:0,12,408	0/1:12,0:12:26.73:27,0,312	0/0:26,0:26:12.04:0,12,321	1/1:14,0:15:9.02:394,9,0	0/1:10,0:10:98.22:900,0,98	1/1:9,0:21:17.30:722,17,0	1/1:15,0:15:14.96:352,15,0
chr10	43364906	.	A	AAC	5405.77	PASS	AB=0.571;AC=12;AF=0.214;AN=56;BaseQRankSum=-13.233;DP=813;FS=5.890;HRun=0;HaplotypeScore=93.1698;InbreedingCoeff=0.7964;MQ=63.94;MQ0=15;MQRankSum=-0.354;QD=28.01;ReadPosRankSum=-3.071;VQSLOD=4.8316;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:59,0:62:99:0,130,1693	0/0:11,0:11:20.65:0,21,228	0/0:59,0:25:35.75:0,36,379	0/0:50,0:20:42.08:0,42,495	1/1:2,12:14:33.11:498,33,0	0/0:23,1:26:14.46:0,14,635	0/0:35,0:36:90.09:0,90,1056	1/1:13,25:39:75.24:1166,75,0	0/0:30,0:30:75.23:0,75,909	0/0:32,0:32:76.46:0,76,888	0/0:9,0:10:23.86:0,24,252	0/0:27,0:27:69.21:0,69,837	0/0:39,0:40:99:0,102,1175	0/0:27,0:27:54.17:0,54,654	0/0:31,0:31:69.21:0,69,837	0/0:24,0:24:51.16:0,51,619	0/0:25,0:25:72.18:0,72,846	0/0:23,0:23:43.07:0,43,608	1/1:12,11:24:36.11:543,36,0	1/1:6,13:19:5.74:568,6,0	1/1:13,43:58:99:1597,99,0	0/0:19,0:19:39.09:0,39,451	0/0:14,0:14:33.04:0,33,362	0/0:31,0:31:84:0,84,975	0/0:18,0:18:51.13:0,51,597	0/0:24,0:24:51.16:0,51,619	0/1:7,19:26:27.52:583,0,28	0/1:3,10:13:3.28:450,0,3
chr10	43367269	.	G	GAAAA	8934.82	PASS	AB=1.000;AC=43;AF=0.768;AN=56;BaseQRankSum=9.254;DP=551;FS=30.307;HRun=2;HaplotypeScore=103.5979;InbreedingCoeff=0.8382;MQ=51.02;MQ0=8;MQRankSum=-8.729;QD=20.35;ReadPosRankSum=-3.510;VQSLOD=-0.3889;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:37,2:36:61.73:971,62,0	0/0:11,0:11:29.99:0,30,447	0/1:17,0:6:8.22:8,0,98	0/0:13,0:9:19.17:0,19,313	1/1:25,0:26:5.98:190,6,0	0/0:22,0:22:66.23:0,66,1204	0/0:21,0:20:51.13:0,51,859	1/1:27,1:27:43.15:617,43,0	0/0:16,0:16:39.12:0,39,671	1/1:25,1:26:37.75:666,38,0	1/1:17,2:20:17.01:336,17,0	1/1:9,0:11:9.03:153,9,0	1/1:14,1:15:15.51:253,16,0	1/1:22,0:22:4.80:229,5,0	1/1:23,0:23:33.11:619,33,0	1/1:14,1:15:31.46:572,31,0	0/0:29,0:29:74.68:0,75,1166	1/1:21,0:21:29.84:490,30,0	1/1:19,1:18:31.82:408,32,0	1/1:25,0:26:45.07:714,45,0	1/1:6,1:7:11.98:128,12,0	1/1:19,0:18:14.51:217,15,0	1/1:21,0:21:23.52:380,24,0	1/1:10,1:11:13.70:189,14,0	1/1:22,1:23:29.97:522,30,0	1/1:19,0:18:48.58:685,49,0	1/1:19,1:19:21.52:376,22,0	1/1:10,0:9:12.51:210,13,0
chr10	43367281	.	A	AAAAG	12870.47	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=7.603;DP=591;FS=62.728;HRun=0;HaplotypeScore=118.9771;InbreedingCoeff=0.9770;MQ=59.20;MQ0=2;MQRankSum=-7.702;QD=27.21;ReadPosRankSum=-2.560;VQSLOD=2.2316;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,32:39:51.16:1106,51,0	0/0:8,0:8:24.01:0,24,326	0/0:13,0:9:15.85:0,16,185	0/0:18,0:15:29.80:0,30,373	1/1:13,0:29:48.60:478,49,0	0/0:22,0:22:63.03:0,63,988	0/0:19,0:18:48.14:0,48,751	1/1:12,16:33:68.21:1183,68,0	0/0:13,0:13:33.10:0,33,500	1/1:7,19:30:63.40:1132,63,0	1/1:7,10:19:24.03:425,24,0	1/1:5,1:17:14.95:188,15,0	1/1:5,1:17:20.97:350,21,0	1/1:5,2:20:15:260,15,0	1/1:5,22:32:36.08:811,36,0	1/1:4,13:20:36.49:738,36,0	0/0:25,0:25:63:0,63,908	1/1:4,16:21:31.35:720,31,0	1/1:6,11:19:48.09:738,48,0	1/1:3,15:21:36.12:837,36,0	1/1:4,4:10:12.04:204,12,0	1/1:6,1:20:26.88:386,27,0	1/1:5,1:21:32.96:532,33,0	1/1:7,5:16:15.43:250,15,0	1/1:9,16:30:39.12:748,39,0	1/1:1,19:23:60.10:1068,60,0	1/1:4,13:19:17.50:398,17,0	1/1:2,5:7:15.02:319,15,0
chr10	43367549	.	GATGA	G	5775.69	PASS	AB=1.000;AC=27;AF=0.500;AN=54;BaseQRankSum=7.367;DP=692;FS=3.870;HRun=0;HaplotypeScore=119.7013;InbreedingCoeff=0.8789;MQ=67.29;MQ0=1;MQRankSum=0.081;QD=16.04;ReadPosRankSum=0.688;VQSLOD=4.6864;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:12,31:43:66.22:1023,66,0	0/0:11,0:11:12.04:0,12,281	0/0:16,0:13:0.47:0,0,1	./.	0/0:30,1:31:10.56:0,11,936	0/0:27,0:27:57.20:0,57,1306	0/0:35,0:35:63.21:0,63,1392	0/0:34,0:34:21.07:0,21,440	0/0:21,0:21:33.11:0,33,729	1/1:20,16:36:45.13:671,45,0	1/1:8,6:14:15.05:232,15,0	1/1:15,16:31:36.12:558,36,0	1/1:16,11:27:24.08:372,24,0	1/1:11,11:22:24.08:372,24,0	0/0:35,1:36:10.71:0,11,1125	0/0:15,0:29:15.05:0,15,262	1/1:11,0:28:23.86:208,24,0	1/1:8,14:22:27.09:418,27,0	0/0:17,0:17:3.01:0,3,71	0/1:26,0:26:2.60:3,0,827	0/0:32,0:32:42.14:0,42,980	1/1:7,16:23:24.08:370,24,0	1/1:6,15:21:32.61:508,33,0	1/1:10,16:26:30.10:465,30,0	1/1:3,9:12:24.08:372,24,0	1/1:16,0:29:22.17:203,22,0	0/0:22,0:22:42.13:0,42,914	0/0:8,0:8:21.07:0,21,492
chr10	43369004	.	G	GAGA	28928.33	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=-15.125;DP=732;FS=6.050;HRun=0;HaplotypeScore=87.4967;InbreedingCoeff=0.9609;MQ=84.44;MQ0=0;MQRankSum=-6.919;QD=51.66;ReadPosRankSum=3.023;VQSLOD=6.6767;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,56:57:99:3164,147,0	0/0:2,0:2:6.02:0,6,95	0/0:33,0:33:49.37:0,49,1101	0/0:35,0:35:78.20:0,78,1172	1/1:3,10:14:33.11:712,33,0	0/0:22,0:22:63.20:0,63,976	0/0:22,0:22:63.20:0,63,974	1/1:4,29:33:87.28:1814,87,0	0/0:25,0:25:63.21:0,63,996	1/1:3,28:32:90.29:1890,90,0	1/1:3,15:18:45.15:982,45,0	1/1:7,33:40:87.30:1898,87,0	1/1:1,29:31:87.30:1898,87,0	1/1:3,20:25:54.19:1177,54,0	1/1:5,34:40:84.29:1834,84,0	1/1:0,34:34:90.31:1965,90,0	0/0:33,0:33:93.30:0,93,1450	1/1:1,20:21:48.16:1049,48,0	1/1:5,23:28:72.22:1411,72,0	1/1:0,13:14:36.08:740,36,0	1/1:5,42:48:96.19:2003,96,0	1/1:0,10:11:21.07:459,21,0	1/1:0,12:13:30.06:610,30,0	1/1:0,41:42:99:2292,105,0	1/1:0,14:15:39.13:852,39,0	1/1:3,23:26:69.20:1396,69,0	1/1:3,11:15:30.10:656,30,0	1/1:1,2:3:6.02:131,6,0
chr10	43369530	.	T	TG	20031.56	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=-9.911;DP=673;FS=4.249;HRun=2;HaplotypeScore=64.9363;InbreedingCoeff=0.9990;MQ=87.96;MQ0=0;MQRankSum=-5.282;QD=38.01;ReadPosRankSum=3.230;VQSLOD=5.5950;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,43:43:99:1640,114,0	0/0:7,0:7:21.06:0,21,249	0/0:26,0:26:66.17:0,66,772	0/0:21,0:21:58.90:0,59,666	1/1:0,22:22:60.20:863,60,0	0/0:21,0:21:60.19:0,60,741	0/0:25,0:25:69.17:0,69,816	1/1:1,30:31:90.25:1238,90,0	0/0:18,0:18:54.17:0,54,664	1/1:0,24:24:72.24:1033,72,0	1/1:2,15:17:42.06:575,42,0	1/1:1,39:40:99:1463,102,0	1/1:0,17:17:51.17:734,51,0	1/1:0,28:29:78.26:1110,78,0	1/1:0,24:24:66.22:949,66,0	1/1:0,16:16:48.16:691,48,0	0/0:28,0:28:78.18:0,78,954	1/1:2,29:31:72.24:1031,72,0	1/1:0,13:13:39.13:560,39,0	1/1:1,16:17:38.94:543,39,0	1/1:3,37:40:99:1424,99,0	1/1:4,24:28:66.13:915,66,0	1/1:0,21:21:48.03:689,48,0	1/1:2,35:37:99:1512,105,0	1/1:0,16:16:39.13:561,39,0	1/1:0,32:32:96.32:1378,96,0	1/1:1,18:19:51.17:734,51,0	1/1:0,10:10:27.09:389,27,0
chr10	43370337	.	ACATCATCAT	A	7160.36	PASS	AB=0.603;AC=31;AF=0.554;AN=56;BaseQRankSum=10.092;DP=635;FS=4.618;HRun=0;HaplotypeScore=202.8472;InbreedingCoeff=0.6557;MQ=59.52;MQ0=5;MQRankSum=-8.856;QD=17.09;ReadPosRankSum=-1.292;VQSLOD=3.7837;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:15,24:39:6.74:637,0,7	0/0:9,0:9:24.08:0,24,1069	0/0:28,0:22:3.81:0,4,19	0/0:20,0:12:13.39:0,13,216	0/1:5,0:14:0:0,0,0	0/0:20,0:20:39.13:0,39,1648	0/0:21,0:21:39.13:0,39,1642	1/1:19,4:23:12:141,12,0	0/0:29,0:29:57.18:0,57,2382	1/1:9,13:22:38.97:978,39,0	1/1:10,10:20:21.03:416,21,0	0/1:11,0:36:15.82:16,0,52	0/1:9,0:29:1.31:1,0,98	0/0:10,0:23:11.34:0,11,173	1/1:10,12:22:24:535,24,0	1/1:8,9:17:18.06:495,18,0	0/0:30,0:29:57.20:0,57,2528	1/1:10,14:24:17.97:370,18,0	1/1:14,1:15:3.01:83,3,0	1/1:11,6:17:21.04:426,21,0	1/1:27,7:33:8.94:122,9,0	0/1:6,0:17:0.09:0,0,84	0/0:4,0:11:7.26:0,7,125	0/0:13,0:25:2.20:0,2,40	1/1:7,8:16:21.87:409,22,0	1/1:17,15:32:45.13:1144,45,0	1/1:13,14:27:48.08:1118,48,0	1/1:10,5:15:12.01:269,12,0
chr10	43371617	.	G	GTT	11872.09	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=-6.279;DP=648;FS=6.919;HRun=11;HaplotypeScore=82.6534;InbreedingCoeff=0.9911;MQ=74.80;MQ0=5;MQRankSum=-1.953;QD=25.53;ReadPosRankSum=-1.011;VQSLOD=4.4013;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,31:40:92.63:1230,93,0	0/0:10,0:12:18.11:0,18,219	0/0:52,0:24:32.46:0,32,242	0/0:36,0:21:22.38:0,22,230	1/1:7,21:31:42.09:879,42,0	0/0:26,0:27:63.60:0,64,638	0/0:16,0:16:42.02:0,42,400	1/1:11,19:35:69.10:885,69,0	0/0:16,0:16:22.39:0,22,325	1/1:7,13:20:19.04:589,19,0	1/1:4,16:21:44.96:541,45,0	1/1:3,13:20:15.83:532,16,0	1/1:0,5:12:21.06:275,21,0	1/1:2,14:17:26.88:377,27,0	1/1:5,14:22:35.60:457,36,0	1/1:2,11:14:20.56:269,21,0	0/0:20,0:21:44.72:0,45,412	1/1:6,13:24:41.11:515,41,0	1/1:12,13:30:59.11:710,59,0	1/1:2,15:19:47.54:576,48,0	1/1:1,8:12:29.58:379,30,0	1/1:4,9:16:30.45:243,30,0	1/1:3,15:21:43.94:569,44,0	1/1:1,12:13:21.07:304,21,0	1/1:6,15:25:43.60:533,44,0	1/1:5,20:27:59.63:748,60,0	1/1:3,15:24:56.09:653,56,0	1/1:3,15:20:47.13:611,47,0
chr10	43375337	.	A	AC	4461.23	PASS	AB=0.608;AC=40;AF=0.714;AN=56;BaseQRankSum=-0.327;DP=476;FS=29.317;HRun=0;HaplotypeScore=69.7518;InbreedingCoeff=0.7485;MQ=75.09;MQ0=6;MQRankSum=-1.713;QD=14.39;ReadPosRankSum=2.158;VQSLOD=3.6313;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:22:50.76:302,51,0	0/0:10,0:10:26.64:0,27,195	0/0:46,0:18:14.79:0,15,216	0/0:34,0:14:5.16:0,5,162	1/1:18,0:18:8.41:138,8,0	0/0:16,0:16:44.79:0,45,362	0/0:14,0:14:35.49:0,35,263	1/1:5,17:22:19.20:355,19,0	0/0:7,0:7:17.91:0,18,139	1/1:16,0:16:40.83:282,41,0	1/1:16,0:16:37.18:255,37,0	1/1:17,0:17:43.88:307,44,0	1/1:8,0:8:20.19:133,20,0	1/1:1,0:1:2.99:24,3,0	1/1:14,0:14:37.80:246,38,0	1/1:11,0:11:9.10:91,9,0	0/0:39,0:39:92.97:0,93,702	1/1:22,0:22:47.05:331,47,0	0/1:3,13:17:14.67:315,0,15	1/1:13,0:13:29.21:237,29,0	0/1:3,3:6:8.58:46,0,9	1/1:14,0:14:36.54:253,37,0	1/1:15,0:15:8.93:150,9,0	1/1:13,0:13:16:116,16,0	1/1:17,0:17:30.69:225,31,0	1/1:16,0:16:41:278,41,0	1/1:21,1:22:30.88:310,31,0	1/1:5,0:10:12.75:66,13,0
chr10	43375589	.	T	TG	2105.24	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-6.768;DP=478;FS=11.103;HRun=6;HaplotypeScore=48.6167;InbreedingCoeff=0.9914;MQ=85.13;MQ0=0;MQRankSum=-1.730;QD=28.45;ReadPosRankSum=1.525;VQSLOD=3.5745;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,99,987	0/0:5,0:5:12.01:0,12,115	0/0:13,0:14:34.89:0,35,339	0/0:21,0:20:31.36:0,31,364	0/0:13,0:13:36.08:0,36,367	0/0:23,0:23:60.08:0,60,595	0/0:17,0:17:48.11:0,48,490	0/0:16,0:16:42.09:0,42,422	0/0:18,0:18:51.11:0,51,519	0/0:17,0:17:45.09:0,45,453	0/0:10,0:10:29.99:0,30,286	1/1:2,10:12:24.08:301,24,0	1/1:0,15:15:42.13:527,42,0	1/1:1,8:9:21.07:258,21,0	0/0:12,0:12:33.07:0,33,336	0/0:13,0:13:33.07:0,33,337	0/0:34,0:34:90.20:0,90,918	0/0:24,0:24:69.13:0,69,695	0/0:20,0:20:50.94:0,51,498	0/0:13,0:13:33.07:0,33,337	0/0:25,0:25:75.13:0,75,748	1/1:0,10:10:24.08:301,24,0	1/1:2,8:10:27.09:339,27,0	1/1:1,17:17:45.14:566,45,0	0/0:18,0:18:54.06:0,54,519	0/0:14,0:14:42.08:0,42,418	0/0:24,0:24:66.15:0,66,672	0/0:17,0:17:42.07:0,42,420
chr10	43376866	.	ATGGTCTCCC	A	1356.87	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.534;DP=754;FS=2.069;HRun=0;HaplotypeScore=203.8260;InbreedingCoeff=0.9994;MQ=78.12;MQ0=0;MQRankSum=-6.823;QD=50.25;ReadPosRankSum=0.894;VQSLOD=3.6781;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,138,6018	0/0:20,0:20:51.17:0,51,2350	0/0:25,0:25:71.57:0,72,2707	0/0:18,0:18:44.91:0,45,1514	1/1:3,24:27:48.16:1452,48,0	0/0:22,0:22:57.18:0,57,2333	0/0:29,0:29:81.26:0,81,3579	0/0:29,0:29:78.25:0,78,3106	0/0:35,0:35:99:0,99,4468	0/0:15,0:15:42.14:0,42,1912	0/0:25,0:25:66.21:0,66,3048	0/0:32,0:32:93.32:0,93,4263	0/0:26,0:26:78.25:0,78,3634	0/0:32,0:32:93.31:0,93,4068	0/0:37,0:37:99:0,105,4547	0/0:24,0:24:69.24:0,69,3098	0/0:36,0:36:99:0,105,4662	0/0:10,0:10:30.09:0,30,1225	0/0:19,0:19:54.19:0,54,2325	0/0:17,0:17:45.12:0,45,1595	0/0:39,0:39:93.32:0,93,4263	0/0:29,0:29:81.19:0,81,3380	0/0:18,0:18:54.19:0,54,2561	0/0:40,0:40:99:0,108,4661	0/0:30,0:30:81.28:0,81,3750	0/0:21,0:21:60.19:0,60,2880	0/0:27,0:27:78.25:0,78,3550	0/0:23,0:23:69.18:0,69,2622
chr10	43377438	.	C	CT	7867.54	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-0.506;DP=704;FS=9.370;HRun=1;HaplotypeScore=120.7772;InbreedingCoeff=0.9999;MQ=84.81;MQ0=0;MQRankSum=-1.163;QD=40.14;ReadPosRankSum=-2.316;VQSLOD=2.8197;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,129,1639	0/0:11,0:11:33.11:0,33,427	0/0:17,0:17:48.03:0,48,579	0/0:28,0:28:78.21:0,78,980	1/1:1,26:27:72.11:1004,72,0	0/0:30,0:30:81.26:0,81,1052	0/0:25,0:25:75.24:0,75,973	1/1:2,32:34:96.31:1415,96,0	0/0:23,0:23:66.21:0,66,857	0/0:22,0:22:66.21:0,66,857	0/0:16,0:16:42.12:0,42,529	0/0:25,0:25:72.23:0,72,926	0/0:23,0:23:63.20:0,63,814	0/0:23,0:23:63.20:0,63,817	0/0:16,0:16:48.16:0,48,623	0/0:27,0:27:81.26:0,81,1048	0/0:31,0:31:93.24:0,93,1156	0/0:24,0:24:66.21:0,66,856	1/1:4,26:30:87.26:1230,87,0	1/1:0,28:28:84.28:1259,84,0	1/1:1,37:38:99:1484,99,0	0/0:31,0:31:87.28:0,87,1118	0/0:21,0:21:63.20:0,63,816	0/0:22,0:22:66.20:0,66,842	0/0:23,0:23:66.21:0,66,857	0/0:27,0:27:78.25:0,78,1008	1/1:2,21:22:63.06:936,63,0	1/1:0,16:16:36.12:540,36,0
chr10	43378822	.	AC	A	7509.84	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=11.920;DP=586;FS=3.186;HRun=6;HaplotypeScore=62.2733;InbreedingCoeff=0.9935;MQ=90.22;MQ0=0;MQRankSum=-4.412;QD=28.66;ReadPosRankSum=2.840;VQSLOD=5.7106;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:84.26:0,84,1078	0/0:4,0:4:12.04:0,12,158	0/0:35,0:34:93.22:0,93,1144	0/0:18,0:18:37.79:0,38,446	1/1:1,16:17:51.13:547,51,0	0/0:21,0:21:63.10:0,63,786	0/0:30,0:30:72.23:0,72,947	1/1:2,26:28:75.14:786,75,0	0/0:17,0:17:51.17:0,51,671	0/0:19,0:19:48.16:0,48,630	0/0:11,0:11:30.10:0,30,394	1/1:1,23:24:60.15:645,60,0	1/1:1,17:18:51.13:547,51,0	1/1:3,26:29:72.18:773,72,0	0/0:26,0:26:78.19:0,78,981	0/0:17,0:17:51.16:0,51,653	0/0:37,0:37:99:0,105,1381	0/0:18,0:18:51.15:0,51,655	1/1:0,12:12:36.09:386,36,0	1/1:5,11:16:45.11:475,45,0	1/1:3,34:37:96.24:1031,96,0	1/1:1,14:15:39.10:418,39,0	1/1:0,20:20:48.12:515,48,0	1/1:3,21:24:63.16:677,63,0	0/0:18,0:18:51.16:0,51,658	0/0:25,0:25:69.22:0,69,904	1/1:0,17:17:51.13:548,51,0	1/1:0,5:5:15.04:161,15,0
chr10	43378828	.	CA	C	1492.07	PASS	AB=0.989;AC=21;AF=0.375;AN=56;BaseQRankSum=17.282;DP=608;FS=7.000;HRun=1;HaplotypeScore=83.0268;InbreedingCoeff=0.5998;MQ=90.99;MQ0=0;MQRankSum=-9.060;QD=5.45;ReadPosRankSum=5.281;VQSLOD=0.6697;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:90.20:0,90,1245	0/0:5,0:5:15.03:0,15,199	0/0:36,0:35:96.12:0,96,1318	0/0:20,0:20:52.61:0,53,589	0/1:19,0:19:1.01:132,0,1	0/0:21,0:21:62.88:0,63,878	0/0:25,0:25:75.24:0,75,1077	0/1:30,0:30:52.51:61,0,53	0/0:18,0:18:51.17:0,51,745	0/0:19,0:19:51.16:0,51,718	0/0:12,0:12:33.09:0,33,462	1/1:25,0:25:8.96:124,9,0	1/1:18,0:18:20.15:157,20,0	1/1:27,1:28:36.93:207,37,0	0/0:27,0:27:78.24:0,78,1094	0/0:21,0:21:63.16:0,63,843	0/0:39,0:39:99:0,117,1629	0/0:18,0:18:54.15:0,54,766	0/1:16,0:16:31.97:57,0,32	0/1:17,1:18:20.16:139,0,20	1/1:35,2:37:51.79:262,52,0	1/1:16,0:16:0.50:87,1,0	1/1:20,0:20:38.17:139,38,0	1/1:21,0:21:50.08:181,50,0	0/0:18,0:18:54.15:0,54,755	0/0:24,0:24:72.22:0,72,1015	0/1:21,0:21:41.24:104,0,41	1/1:5,0:5:11.71:40,12,0
chr10	43379477	.	TTGTGTGTGTG	T	939.04	PASS	AB=0.781;AC=9;AF=0.167;AN=54;BaseQRankSum=4.660;DP=617;FS=0.000;HRun=0;HaplotypeScore=183.2050;InbreedingCoeff=0.5866;MQ=64.29;MQ0=7;MQRankSum=-3.999;QD=9.58;ReadPosRankSum=0.890;VQSLOD=2.5165;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:36.10:0,36,1483	0/0:3,0:9:11.21:0,11,189	./.	0/0:18,0:15:6.02:0,6,142	0/0:23,0:23:11.96:0,12,481	0/0:18,0:23:2.37:0,2,10	0/0:16,0:19:6.02:0,6,90	0/0:30,0:28:19.88:0,20,502	0/0:15,0:23:6.02:0,6,113	0/0:20,0:20:21.07:0,21,930	0/0:7,0:8:6.02:0,6,240	1/1:18,6:24:9.03:268,9,0	0/1:18,5:25:3.55:346,0,4	1/1:12,11:24:12.51:301,13,0	0/0:29,0:30:42.13:0,42,1683	0/0:18,0:20:42.14:0,42,1845	0/0:28,0:28:51.17:0,51,2264	0/0:19,0:19:48.64:0,49,1997	0/0:16,0:15:15.05:0,15,536	0/0:16,0:16:12.04:0,12,499	0/0:47,0:47:6.49:0,6,255	1/1:10,2:13:6.02:153,6,0	1/1:8,4:12:0.47:1,0,0	0/0:14,10:25:0:0,0,0	0/0:13,0:13:6.02:0,6,267	0/0:32,0:34:57.17:0,57,1970	0/0:28,0:29:21.54:0,22,878	0/0:9,0:8:9.03:0,9,390
chr10	43379479	.	G	GTGTA	2785.16	PASS	AB=0.890;AC=21;AF=0.375;AN=56;BaseQRankSum=-3.843;DP=634;FS=0.000;HRun=0;HaplotypeScore=139.4926;InbreedingCoeff=0.6227;MQ=60.23;MQ0=8;MQRankSum=0.367;QD=9.16;ReadPosRankSum=-0.875;VQSLOD=2.9031;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:84.32:0,84,818	0/0:10,0:10:14.82:0,15,137	0/0:20,0:13:33.04:0,33,330	0/0:16,0:13:32.93:0,33,303	1/1:4,17:22:5.02:181,5,0	0/0:23,0:23:39.42:0,39,330	0/0:18,0:18:20.83:0,21,159	1/1:31,0:29:47.36:532,47,0	0/0:23,0:23:34.58:0,35,250	0/0:22,0:22:56.96:0,57,596	0/0:10,0:10:9.01:0,9,102	0/1:21,0:22:0.36:163,0,0	1/1:25,0:24:9.06:273,9,0	0/1:23,0:23:9.59:169,0,10	0/0:32,0:31:77.71:0,78,869	0/0:22,0:22:51.09:0,51,729	0/0:29,0:29:74.87:0,75,909	0/0:20,0:20:51.39:0,51,636	1/1:17,0:16:26.82:351,27,0	1/1:14,2:16:12.03:234,12,0	0/1:8,43:60:14.83:93,0,15	0/1:13,0:13:13.75:56,0,14	1/1:11,0:11:14.97:122,15,0	1/1:21,0:21:14.94:116,15,0	0/0:12,0:12:14.37:0,14,139	0/0:35,0:34:59.05:0,59,740	1/1:6,24:32:29.11:584,29,0	0/1:10,1:10:16.08:112,0,16
chr10	43379481	.	G	GTA	2364.09	PASS	AB=0.862;AC=23;AF=0.411;AN=56;BaseQRankSum=0.269;DP=637;FS=2.476;HRun=0;HaplotypeScore=119.9520;InbreedingCoeff=0.7927;MQ=56.71;MQ0=9;MQRankSum=-1.028;QD=7.85;ReadPosRankSum=1.441;VQSLOD=3.3080;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:92.50:0,92,825	0/0:10,0:10:17.75:0,18,132	0/0:18,0:11:33.04:0,33,330	0/0:14,0:11:32.93:0,33,303	0/1:21,1:22:5.95:125,0,6	0/0:22,0:22:41.91:0,42,339	0/0:17,0:17:26.42:0,26,192	1/1:34,0:32:29.39:515,29,0	0/0:23,0:23:34.84:0,35,256	0/0:24,0:24:62.86:0,63,605	0/0:11,0:11:11.99:0,12,116	1/1:19,0:20:27.69:204,28,0	1/1:25,0:24:47.17:330,47,0	1/1:22,0:22:31.64:219,32,0	0/0:32,0:31:80.73:0,81,782	0/0:22,0:22:57.02:0,57,651	0/0:30,0:30:80.85:0,81,863	0/0:22,0:22:55.16:0,55,573	1/1:16,1:15:23.48:308,23,0	1/1:4,11:15:10.58:134,11,0	0/1:60,1:61:21.91:44,0,22	1/1:13,0:13:7.74:69,8,0	1/1:11,0:11:14.97:122,15,0	1/1:21,0:21:14.94:116,15,0	0/0:13,0:13:17.98:0,18,167	0/0:37,0:36:88.74:0,89,787	1/1:28,1:29:28.81:290,29,0	0/1:5,6:10:2.52:100,0,3
chr10	43379905	.	TGCAC	T	10201.83	PASS	AB=0.552;AC=25;AF=0.446;AN=56;BaseQRankSum=-7.833;DP=881;FS=6.795;HRun=0;HaplotypeScore=252.3780;InbreedingCoeff=0.9166;MQ=44.44;MQ0=26;MQRankSum=1.900;QD=24.29;ReadPosRankSum=2.981;VQSLOD=3.8646;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:35.76:0,36,542	0/0:14,0:14:36.31:0,36,574	0/0:42,0:13:21.93:0,22,551	0/0:55,0:17:50.99:0,51,1092	1/1:2,30:32:38.98:816,39,0	0/0:22,0:22:41.37:0,41,657	0/0:38,0:38:52:0,52,869	0/1:7,30:34:99:788,0,121	0/0:31,0:30:33.63:0,34,579	0/0:35,0:32:61.87:0,62,1355	0/0:19,0:19:45.43:0,45,713	1/1:0,41:41:37.53:813,38,0	1/1:0,32:32:38.83:815,39,0	1/1:0,32:32:17.74:435,18,0	0/0:30,0:29:16.76:0,17,282	0/0:34,0:34:39.61:0,40,698	0/0:21,0:21:39.05:0,39,1225	0/0:21,0:21:54.58:0,55,926	1/1:3,23:23:63.01:922,63,0	1/1:0,28:28:45.15:943,45,0	1/1:2,65:67:90.33:1851,90,0	1/1:0,29:29:26.95:566,27,0	1/1:1,25:26:29.28:574,29,0	1/1:0,29:29:18.06:377,18,0	0/0:27,0:27:41.02:0,41,784	0/0:32,0:30:10.25:0,10,1191	1/1:0,28:28:44.79:848,45,0	1/1:0,12:13:23.87:453,24,0
chr10	43380390	.	GTTT	G	3048.75	PASS	AB=0.944;AC=27;AF=0.482;AN=56;BaseQRankSum=7.603;DP=561;FS=8.985;HRun=16;HaplotypeScore=85.2408;InbreedingCoeff=0.9045;MQ=73.39;MQ0=1;MQRankSum=-2.982;QD=12.49;ReadPosRankSum=5.937;VQSLOD=0.7374;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:48:99:0,109,1598	0/0:9,0:9:21.07:0,21,342	0/0:35,0:24:26.56:0,27,313	0/1:15,0:8:16.37:16,0,80	1/1:7,10:18:29.68:302,30,0	0/0:14,0:16:39.12:0,39,614	0/0:19,0:22:60.14:0,60,895	1/1:8,12:21:35.66:371,36,0	0/0:22,0:24:48.14:0,48,727	0/0:17,0:20:39.06:0,39,540	0/0:14,0:14:30.10:0,30,479	1/1:6,14:20:29.94:323,30,0	1/1:4,3:8:8.80:82,9,0	1/1:8,10:19:29.75:304,30,0	0/0:19,0:20:38.92:0,39,589	0/0:11,0:11:24.05:0,24,341	0/0:28,0:31:69.71:0,70,1152	0/0:23,0:31:62.10:0,62,848	1/1:9,6:16:14.56:145,15,0	1/1:8,14:22:29.38:298,29,0	1/1:17,9:26:19.47:220,19,0	1/1:9,7:16:13.07:186,13,0	1/1:5,6:11:14.87:161,15,0	1/1:2,16:18:36:383,36,0	0/0:12,0:13:36.10:0,36,559	0/0:20,1:23:18.79:0,19,589	1/1:10,14:25:35.59:357,36,0	1/1:1,4:6:10.48:126,10,0
chr10	43380567	.	G	GCA	7843.22	PASS	AB=0.786;AC=26;AF=0.464;AN=56;BaseQRankSum=-13.575;DP=628;FS=5.726;HRun=0;HaplotypeScore=79.0971;InbreedingCoeff=0.7300;MQ=63.99;MQ0=7;MQRankSum=-0.218;QD=24.59;ReadPosRankSum=4.604;VQSLOD=5.4090;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,105,1158	0/0:14,0:14:27.01:0,27,302	0/1:16,0:11:20.09:20,0,45	0/1:16,0:12:6.37:6,0,87	1/1:2,19:21:33.11:538,33,0	0/0:21,0:23:50.91:0,51,574	0/0:34,0:34:81.10:0,81,914	0/1:6,14:21:12.04:441,0,12	0/0:17,0:17:44.97:0,45,488	0/0:24,0:24:56.85:0,57,608	0/0:17,0:17:47.11:0,47,530	1/1:2,21:23:33.11:541,33,0	1/1:1,10:10:21.07:344,21,0	1/1:5,18:23:33.11:541,33,0	0/0:17,0:17:39:0,39,432	0/0:13,0:13:29.98:0,30,335	0/0:30,0:30:77.29:0,77,856	0/0:36,0:36:87.19:0,87,1030	1/1:6,13:16:36.07:515,36,0	0/1:4,14:18:15.02:410,0,15	1/1:13,41:54:69.46:1313,69,0	1/1:1,15:16:36.12:583,36,0	1/1:4,10:14:17.98:295,18,0	1/1:5,30:35:81.28:1328,81,0	0/0:18,0:18:39.05:0,39,439	0/0:20,0:21:52.94:0,53,579	1/1:6,17:23:42.14:672,42,0	1/1:1,6:7:18.06:295,18,0
chr10	43382338	.	T	TG	5944.76	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-14.172;DP=599;FS=0.348;HRun=5;HaplotypeScore=56.9667;InbreedingCoeff=0.9947;MQ=77.59;MQ0=1;MQRankSum=-2.165;QD=31.79;ReadPosRankSum=1.171;VQSLOD=5.3566;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,35:41:87.28:1145,87,0	0/0:7,0:7:18.05:0,18,193	0/0:11,0:11:26.70:0,27,247	0/0:13,0:13:20.06:0,20,187	0/0:17,0:17:48.12:0,48,515	0/0:16,0:16:45.11:0,45,483	0/0:31,0:31:81.20:0,81,870	0/0:18,0:18:45.11:0,45,483	0/0:20,0:20:57.11:0,57,596	1/1:6,13:19:42.06:520,42,0	1/1:1,17:18:45.15:591,45,0	0/0:32,0:32:84.21:0,84,903	0/0:27,0:27:78.19:0,78,837	0/0:19,0:19:57.14:0,57,612	1/1:1,18:19:54.18:711,54,0	1/1:0,12:12:30.10:395,30,0	0/0:28,0:28:72.13:0,72,753	1/1:1,28:29:78.25:1026,78,0	0/0:23,0:23:54.11:0,54,566	0/0:10,0:10:27.07:0,27,289	0/0:51,0:50:99:0,135,1432	0/0:20,0:20:48.10:0,48,508	0/0:22,0:22:60.15:0,60,644	0/0:23,0:23:57.14:0,57,612	1/1:1,19:20:51.17:671,51,0	1/1:4,25:29:72.16:886,72,0	0/0:19,0:19:57.11:0,57,595	0/0:5,0:5:15.04:0,15,161
chr10	43384095	.	CTGCCCCCAT	C	16371.19	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=15.862;DP=574;FS=1.547;HRun=0;HaplotypeScore=178.3593;InbreedingCoeff=0.9970;MQ=69.52;MQ0=0;MQRankSum=-17.305;QD=69.37;ReadPosRankSum=0.260;VQSLOD=4.9459;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,141,6491	0/0:8,0:8:24.08:0,24,1168	0/0:14,0:14:42.14:0,42,1799	0/0:15,0:15:42.11:0,42,1517	1/1:2,12:14:30.10:927,30,0	0/0:16,0:16:48.16:0,48,2317	0/0:40,0:40:99:0,120,5695	1/1:2,21:23:63.17:1838,63,0	0/0:17,0:17:48.16:0,48,2298	0/0:22,0:22:66.23:0,66,3226	0/0:9,0:9:27.09:0,27,1290	1/1:2,16:18:51.18:1553,51,0	1/1:0,15:15:45.15:1390,45,0	1/1:3,20:22:51.18:1575,51,0	0/0:30,0:30:87.30:0,87,4120	0/0:20,0:20:60.21:0,60,2913	0/0:34,0:34:93.32:0,93,4416	0/0:27,0:27:81.28:0,81,3762	1/1:2,19:21:57.14:1514,57,0	1/1:1,14:15:45.11:1317,45,0	1/1:7,19:26:31.46:929,31,0	1/1:5,20:25:57.20:1731,57,0	1/1:2,19:21:48.16:1482,48,0	1/1:3,10:13:15.05:464,15,0	0/0:11,0:11:33.11:0,33,1619	0/0:26,0:26:75.26:0,75,3496	1/1:1,12:13:27.09:834,27,0	1/1:0,9:9:27.09:816,27,0
chr10	43384182	.	T	TG	3724.06	PASS	AB=0.556;AC=19;AF=0.339;AN=56;BaseQRankSum=-4.970;DP=473;FS=1.363;HRun=7;HaplotypeScore=65.8347;InbreedingCoeff=0.8892;MQ=83.18;MQ0=1;MQRankSum=-2.203;QD=26.23;ReadPosRankSum=0.350;VQSLOD=4.2525;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,108,1043	0/1:1,4:5:13.75:130,0,14	0/0:23,0:22:35.69:0,36,319	0/0:23,0:19:2.53:0,3,113	0/0:19,0:19:42.07:0,42,405	1/1:1,14:15:36.11:435,36,0	1/1:5,18:23:22.23:551,22,0	0/0:15,0:15:30.04:0,30,290	1/1:2,15:17:39.12:471,39,0	0/0:17,0:17:51.08:0,51,492	0/0:6,0:6:15.02:0,15,144	1/1:7,10:17:39.06:440,39,0	1/1:6,8:14:30.09:361,30,0	1/1:6,10:15:33.10:397,33,0	0/0:18,0:18:48.07:0,48,463	0/0:14,0:14:36.05:0,36,348	0/0:20,0:20:45.03:0,45,427	0/0:22,0:22:63.10:0,63,608	0/0:20,0:20:48.02:0,48,450	0/0:10,0:10:21.02:0,21,203	0/0:25,0:25:60.10:0,60,579	1/1:2,11:13:30.09:361,30,0	1/1:6,7:13:21.06:252,21,0	1/1:0,9:9:27.08:326,27,0	0/0:15,0:15:42.06:0,42,406	0/0:21,0:21:48.07:0,48,459	0/0:18,0:18:48.07:0,48,462	0/0:5,0:5:15.02:0,15,145
chr10	43384558	.	ACC	A	3465.20	PASS	AB=0.619;AC=22;AF=0.393;AN=56;BaseQRankSum=0.209;DP=387;FS=8.072;HRun=11;HaplotypeScore=59.4420;InbreedingCoeff=0.7573;MQ=80.43;MQ0=1;MQRankSum=-0.305;QD=20.15;ReadPosRankSum=5.923;VQSLOD=2.0837;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:23:27.08:0,27,361	1/1:1,6:7:18:191,18,0	0/0:11,0:11:15.95:0,16,196	0/0:21,0:19:6.74:0,7,233	0/0:7,0:13:12.35:0,12,42	1/1:4,10:14:29.91:319,30,0	1/1:5,21:26:57.04:605,57,0	0/0:6,0:15:12.98:0,13,60	1/1:3,15:18:51.07:527,51,0	0/0:7,0:7:9.01:0,9,116	0/0:12,0:12:9:0,9,95	1/1:3,9:12:21.04:223,21,0	1/1:2,16:18:42.08:433,42,0	1/1:1,13:15:35.83:363,36,0	0/0:6,0:17:11.81:0,12,115	0/0:3,0:5:2.95:0,3,45	0/0:16,0:20:41.57:0,42,520	0/0:3,0:18:15.04:0,15,179	0/1:6,1:12:13.95:14,0,34	0/0:3,0:12:15.44:0,15,63	0/0:4,0:12:20.48:0,20,100	1/1:3,11:14:24.05:255,24,0	1/1:1,5:7:17.78:172,18,0	1/1:2,15:16:33.08:351,33,0	0/0:2,0:8:8.97:0,9,79	0/0:8,0:13:18.03:0,18,211	0/1:3,1:12:11.51:12,0,41	0/0:3,0:5:4.99:0,5,17
chr10	43385038	.	T	TTTTTA	1724.40	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=2.771;DP=632;FS=0.000;HRun=0;HaplotypeScore=131.1347;InbreedingCoeff=0.7215;MQ=52.17;MQ0=28;MQRankSum=-4.281;QD=27.37;ReadPosRankSum=4.245;VQSLOD=3.2293;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:49:99:0,131,1289	0/1:9,0:9:8.16:198,0,8	0/0:11,0:6:5.95:0,6,65	0/0:11,0:8:5.23:0,5,89	0/0:28,0:28:49.29:0,49,391	1/1:15,6:20:27.79:810,28,0	1/1:9,3:13:30.47:528,30,0	0/0:38,0:37:68.59:0,69,528	1/1:18,0:18:15.47:335,15,0	0/0:29,0:27:49.13:0,49,429	0/0:20,0:19:47.85:0,48,377	0/0:16,0:14:28.78:0,29,275	0/0:17,0:14:29.26:0,29,211	0/0:15,0:15:13.96:0,14,107	0/0:24,0:22:46.51:0,47,395	0/0:19,0:19:9.71:0,10,189	0/0:35,0:32:60.44:0,60,718	0/0:52,0:47:76.67:0,77,662	0/0:21,0:17:33.20:0,33,295	0/0:27,0:27:11.64:0,12,266	0/0:8,0:8:2.76:0,3,23	0/0:23,0:22:31.66:0,32,239	0/0:18,0:17:39.26:0,39,335	0/0:20,0:19:32.40:0,32,329	0/0:20,0:20:37.83:0,38,390	0/0:20,0:17:25.12:0,25,190	0/0:26,0:25:41.72:0,42,283	0/0:17,0:14:12.25:0,12,177
chr10	43385045	.	CT	C	290.29	PASS	AB=0.727;AC=4;AF=0.071;AN=56;BaseQRankSum=4.759;DP=629;FS=0.000;HRun=17;HaplotypeScore=93.5900;InbreedingCoeff=0.0193;MQ=49.46;MQ0=29;MQRankSum=-2.618;QD=4.40;ReadPosRankSum=2.888;VQSLOD=1.3044;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:53,1:50:96.22:0,96,870	0/1:6,4:10:24.70:51,0,25	0/0:8,0:5:3.01:0,3,33	0/0:8,0:5:0:0,0,0	0/0:26,0:26:38.86:0,39,346	0/1:12,9:20:9.69:202,0,10	0/1:14,3:14:27.99:68,0,28	0/0:38,0:37:73.08:0,73,613	0/1:8,10:18:35.92:77,0,36	0/0:23,0:21:20.98:0,21,196	0/0:20,1:20:2.01:0,2,232	0/0:15,0:13:9.15:0,9,62	0/0:14,0:11:15.92:0,16,156	0/0:15,0:15:14.98:0,15,142	0/0:22,0:20:45.04:0,45,446	0/0:20,0:20:10.15:0,10,280	0/0:33,2:32:24.80:0,25,430	0/0:57,0:52:17.86:0,18,494	0/0:22,0:18:26.96:0,27,255	0/0:30,0:30:45.62:0,46,398	0/0:8,0:8:6.02:0,6,65	0/0:21,0:20:9.91:0,10,100	0/0:18,0:17:21.26:0,21,184	0/0:21,0:20:12.74:0,13,181	0/0:19,0:19:27.04:0,27,239	0/0:22,0:19:29.40:0,29,249	0/0:24,0:27:49.99:0,50,456	0/0:18,0:15:26.57:0,27,219
chr10	43387016	.	T	TATTA	2673	PASS	AB=0.583;AC=7;AF=0.125;AN=56;BaseQRankSum=-8.338;DP=494;FS=8.822;HRun=0;HaplotypeScore=88.8298;InbreedingCoeff=0.8106;MQ=78.99;MQ0=0;MQRankSum=-1.514;QD=47.73;ReadPosRankSum=0.569;VQSLOD=4.2419;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,132,2225	0/1:2,5:7:37.12:288,0,37	0/0:18,0:18:38.97:0,39,602	0/0:12,0:12:7.19:0,7,228	0/0:20,0:20:54.18:0,54,939	1/1:5,15:20:36.12:912,36,0	1/1:5,7:12:24.08:560,24,0	0/0:28,0:28:48.14:0,48,762	1/1:3,13:16:42.14:1061,42,0	0/0:21,0:21:60.19:0,60,987	0/0:10,0:10:24.08:0,24,417	0/0:14,0:14:36.12:0,36,617	0/0:20,0:20:45.15:0,45,776	0/0:11,0:11:30.10:0,30,515	0/0:18,0:18:42.14:0,42,730	0/0:13,0:13:27.09:0,27,455	0/0:23,0:23:60.21:0,60,1043	0/0:10,0:10:24.08:0,24,410	0/0:22,0:21:54.18:0,54,932	0/0:11,0:11:30.10:0,30,515	0/0:17,0:17:51.16:0,51,858	0/0:15,0:15:36.12:0,36,626	0/0:14,0:14:38.91:0,39,671	0/0:25,0:25:57.19:0,57,991	0/0:16,0:16:45.15:0,45,757	0/0:26,0:26:69.24:0,69,1199	0/0:8,0:8:21.07:0,21,365	0/0:16,0:16:36.12:0,36,626
chr10	43387193	.	TTTTCTCTC	T	3480.48	PASS	AC=36;AF=0.667;AN=54;BaseQRankSum=-1.411;DP=377;FS=13.337;HRun=0;HaplotypeScore=78.5002;InbreedingCoeff=0.9346;MQ=55.26;MQ0=28;MQRankSum=-0.525;QD=17.23;ReadPosRankSum=0.295;VQSLOD=1.3515;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:19:43.64:311,44,0	1/1:3,0:2:5.95:44,6,0	0/0:36,0:13:29:0,29,298	0/0:51,0:17:19.99:0,20,261	1/1:12,0:10:17.78:148,18,0	./.	1/1:13,0:13:29.89:294,30,0	1/1:19,0:18:51.37:439,51,0	1/1:6,0:6:8.99:74,9,0	1/1:0,0:12:35.90:317,36,0	1/1:5,0:5:11.75:90,12,0	0/0:8,0:8:17.99:0,18,266	0/0:10,0:9:22.84:0,23,297	0/0:6,0:6:15.03:0,15,290	1/1:9,0:7:17.97:148,18,0	1/1:4,0:4:11.93:92,12,0	0/0:17,0:17:36.78:0,37,353	1/1:10,0:9:23.79:172,24,0	1/1:18,0:15:14.30:259,14,0	1/1:10,0:9:15.37:112,15,0	1/1:28,0:25:44.54:364,45,0	0/0:8,0:7:20.15:0,20,147	0/0:9,0:8:16.28:0,16,165	0/0:12,0:11:21.91:0,22,315	1/1:13,0:11:23.91:190,24,0	1/1:7,0:7:20.93:179,21,0	1/1:5,1:5:14.96:180,15,0	1/1:5,0:3:8.95:67,9,0
chr10	43387650	.	GCACACACACGCACACACACACAAACACA	G	4409.64	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=6.813;DP=667;FS=2.969;HRun=0;HaplotypeScore=425.8295;InbreedingCoeff=0.9187;MQ=63.51;MQ0=5;MQRankSum=-7.371;QD=66.81;ReadPosRankSum=3.474;VQSLOD=2.6020;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,105,10095	1/1:3,5:8:3.01:221,3,0	0/0:24,0:7:14.95:0,15,228	0/0:21,0:8:13.60:0,14,467	0/0:31,0:30:87.28:0,87,8159	1/1:1,25:26:30.10:2205,30,0	1/1:3,16:19:9.03:662,9,0	0/0:22,0:22:60.12:0,60,3951	1/1:0,13:13:18.06:1323,18,0	0/0:20,0:20:48.16:0,48,4679	0/0:12,0:12:30.10:0,30,2591	0/0:20,0:20:54.19:0,54,5876	0/0:24,0:24:72.18:0,72,6886	0/0:30,0:30:78.17:0,78,7554	0/0:17,0:17:39.13:0,39,3800	0/0:24,0:24:66.23:0,66,7031	0/0:33,0:33:93.19:0,93,8584	0/0:31,0:31:75.18:0,75,6922	0/0:26,0:26:59.52:0,60,3495	0/0:22,0:22:63.22:0,63,5720	0/0:39,0:39:87.12:0,87,6287	0/0:16,0:16:42.14:0,42,3796	0/0:23,0:23:63.19:0,63,5767	0/0:35,0:34:78.24:0,78,7119	0/0:25,0:25:60.14:0,60,4526	0/0:22,0:22:63.22:0,63,6540	0/0:29,0:29:71.93:0,72,6842	0/0:14,0:14:36.12:0,36,3792
chr10	43387673	.	AAC	A	4198.25	PASS	AB=0.842;AC=23;AF=0.411;AN=56;BaseQRankSum=6.457;DP=686;FS=1.655;HRun=0;HaplotypeScore=113.7470;InbreedingCoeff=0.7582;MQ=60.11;MQ0=9;MQRankSum=-1.217;QD=15.27;ReadPosRankSum=1.358;VQSLOD=3.5170;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,1:43:41.45:0,41,1127	1/1:5,0:5:2.84:14,3,0	0/0:30,0:8:15.03:0,15,205	0/0:39,0:23:36.14:0,36,442	1/1:3,30:33:83.93:926,84,0	1/1:25,0:25:28.41:139,28,0	1/1:16,0:16:8.52:42,9,0	1/1:11,24:36:23.42:609,23,0	1/1:13,0:13:17.04:83,17,0	0/0:23,0:23:54.17:0,54,813	0/1:11,1:12:9.12:9,0,306	0/0:23,0:23:60.20:0,60,937	0/0:22,1:23:20.98:0,21,788	0/0:27,2:29:30.02:0,30,929	0/1:16,1:17:3.07:3,0,447	0/0:23,0:23:60.20:0,60,958	0/0:28,0:28:56:0,56,868	0/0:32,0:32:63.07:0,63,939	1/1:12,10:21:30.07:347,30,0	1/1:3,18:21:51.12:600,51,0	0/1:14,14:29:11.96:307,0,12	0/0:17,1:18:5.95:0,6,564	0/0:21,2:23:18:0,18,767	0/0:28,2:29:24:0,24,840	0/0:21,1:22:31.31:0,31,727	0/0:25,0:25:63.21:0,63,991	1/1:2,26:28:63.11:758,63,0	1/1:3,14:17:30.09:362,30,0
chr10	43387721	.	T	TA	5216.33	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-12.638;DP=622;FS=1.128;HRun=8;HaplotypeScore=90.3692;InbreedingCoeff=0.9940;MQ=72.00;MQ0=2;MQRankSum=1.464;QD=26.89;ReadPosRankSum=1.742;VQSLOD=5.1299;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,38:43:99:1174,105,0	0/0:7,0:7:21.01:0,21,191	0/0:18,0:16:13.59:0,14,237	0/0:22,0:21:33.59:0,34,270	0/0:28,0:27:38.06:0,38,597	0/0:29,0:29:72.03:0,72,657	0/0:18,0:18:45.01:0,45,407	0/0:25,0:25:51:0,51,464	0/0:12,0:12:29.97:0,30,267	1/1:1,24:25:69.17:772,69,0	1/1:0,9:9:24.07:277,24,0	0/0:19,0:19:47.94:0,48,420	0/0:25,0:25:63.01:0,63,572	0/0:24,0:24:60.02:0,60,549	1/1:0,19:19:51.15:588,51,0	1/1:2,16:18:45.13:519,45,0	0/0:35,0:35:86.87:0,87,773	1/1:4,26:30:51.15:586,51,0	0/0:19,0:19:38.21:0,38,328	0/0:22,0:22:51:0,51,461	0/0:14,0:14:29.98:0,30,270	0/0:19,0:19:48:0,48,435	0/0:26,0:26:69.01:0,69,623	0/0:28,0:28:69:0,69,624	1/1:4,16:20:20.73:482,21,0	1/1:6,24:30:72.19:818,72,0	0/0:26,0:26:47.90:0,48,428	0/0:12,0:12:24.01:0,24,220
chr10	43389382	.	C	CTG	10767.68	PASS	AB=0.608;AC=21;AF=0.375;AN=56;BaseQRankSum=-16.937;DP=912;FS=10.000;HRun=0;HaplotypeScore=112.4291;InbreedingCoeff=0.7686;MQ=65.90;MQ0=3;MQRankSum=1.053;QD=29.34;ReadPosRankSum=4.552;VQSLOD=6.4172;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:13,43:55:42.50:1654,42,0	1/1:2,9:11:24.08:383,24,0	0/0:38,0:31:45.70:0,46,511	0/0:51,0:39:52.77:0,53,518	0/0:32,0:34:77.86:0,78,856	1/1:2,23:26:66.21:1029,66,0	0/1:15,27:42:43.81:1020,0,44	0/0:30,0:33:50.44:0,50,532	1/1:8,19:29:28.33:718,28,0	1/1:7,21:28:63.14:907,63,0	1/1:4,23:27:60.12:916,60,0	0/0:39,0:39:90.25:0,90,1056	0/0:22,0:24:50.94:0,51,561	0/0:33,0:34:90.08:0,90,1032	1/1:9,21:30:18.23:779,18,0	0/1:11,18:30:25.37:700,0,25	0/0:41,0:42:80.50:0,81,1049	1/1:7,30:36:81.28:1294,81,0	0/0:19,0:18:36.05:0,36,406	0/0:18,0:18:17.22:0,17,443	0/0:53,0:54:99:0,99,1151	0/0:28,0:31:65.98:0,66,732	0/0:16,0:18:38.65:0,39,423	0/0:50,0:50:99:0,126,1496	1/1:3,13:16:30.10:480,30,0	0/1:12,23:35:33.33:887,0,33	0/0:36,0:36:72.11:0,72,817	0/0:23,0:23:60.15:0,60,694
chr10	43389754	.	C	CAG	648.07	PASS	AB=0.977;AC=17;AF=0.370;AN=46;BaseQRankSum=-4.765;DP=714;FS=0.915;HRun=0;HaplotypeScore=129.3307;InbreedingCoeff=0.1194;MQ=52.19;MQ0=31;MQRankSum=2.023;QD=2.27;ReadPosRankSum=0.312;VQSLOD=1.9211;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:26:18.27:181,18,0	0/1:4,0:3:0:0,0,0	0/0:72,0:19:0:0,0,0	./.	0/1:22,0:20:0:0,0,0	0/1:20,0:19:21.27:32,0,21	0/0:33,0:26:1.39:0,1,6	1/1:12,0:12:2.24:5,2,0	0/1:28,0:25:3.58:4,0,35	0/0:15,0:15:5.08:0,5,22	./.	0/0:23,0:23:0:0,0,0	0/0:19,0:20:11.36:0,11,56	0/0:25,0:25:2.74:0,3,14	0/0:24,0:25:8.07:0,8,54	0/0:23,0:22:9.69:0,10,40	1/1:31,1:32:11.82:97,12,0	0/1:35,0:31:98.20:154,0,98	0/1:23,0:22:8.12:61,0,8	./.	0/1:29,0:29:11.15:88,0,11	./.	./.	0/0:28,0:28:2.43:0,2,13	0/0:23,0:23:8.16:0,8,40	0/1:18,0:18:11.73:15,0,12	0/1:17,6:21:9.96:79,0,10	1/1:10,0:9:5.46:61,5,0
chr10	43389756	.	G	GA	1592.51	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=9.891;DP=719;FS=26.559;HRun=1;HaplotypeScore=121.8337;InbreedingCoeff=0.7536;MQ=51.00;MQ0=30;MQRankSum=-8.003;QD=14.35;ReadPosRankSum=-4.900;VQSLOD=0.7707;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:26:56.21:0,56,633	1/1:3,1:3:3.80:77,4,0	0/0:70,0:17:28.07:0,28,356	0/0:85,0:12:3.64:0,4,203	0/0:22,0:20:24.07:0,24,305	1/1:12,8:19:42.25:517,42,0	1/1:30,3:26:46.28:544,46,0	0/0:14,0:14:37.43:0,37,421	1/1:17,8:23:50.93:600,51,0	0/0:16,0:16:39.58:0,40,467	0/0:11,0:11:18.06:0,18,229	0/0:22,0:22:45.04:0,45,550	0/0:20,0:20:27.62:0,28,279	0/0:24,0:24:19.69:0,20,527	0/0:25,1:26:4.06:0,4,565	0/0:24,0:23:22.44:0,22,618	0/0:33,0:32:67.67:0,68,773	0/0:35,0:32:91.70:0,92,1020	0/0:24,0:23:59.64:0,60,701	0/0:6,0:6:9.03:0,9,115	0/0:32,0:32:52.66:0,53,622	0/0:23,0:23:27.42:0,27,517	0/0:12,0:12:23.82:0,24,305	0/1:28,0:28:8.53:9,0,98	0/0:24,0:24:38.92:0,39,463	0/0:19,0:19:45.12:0,45,537	0/0:25,0:23:51.21:0,51,589	0/0:13,0:12:24.60:0,25,267
chr10	43389757	.	AG	A	1469.74	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=9.621;DP=722;FS=20.129;HRun=1;HaplotypeScore=115.9636;InbreedingCoeff=0.8422;MQ=51.01;MQ0=34;MQRankSum=-7.856;QD=13.74;ReadPosRankSum=-4.014;VQSLOD=0.9357;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:27:60:0,60,771	1/1:2,2:3:6.49:81,6,0	0/0:68,0:16:28.07:0,28,356	0/0:84,0:12:3.64:0,4,203	0/0:22,0:20:24.07:0,24,325	1/1:16,3:18:44.02:496,44,0	1/1:22,10:25:44.87:457,45,0	0/0:14,0:14:38.78:0,39,436	1/1:16,9:22:50.77:587,51,0	0/0:19,0:19:46.22:0,46,526	0/0:12,0:12:18.06:0,18,239	0/0:23,0:23:44.63:0,45,543	0/0:21,0:20:24.39:0,24,234	0/0:23,0:23:37.93:0,38,534	0/0:27,0:27:55.74:0,56,616	0/0:27,0:26:55.52:0,56,671	0/0:33,0:32:72.23:0,72,968	0/0:35,0:32:93.20:0,93,1243	0/0:25,0:23:62.31:0,62,769	0/0:6,0:6:10.58:0,11,119	0/0:32,0:32:57.66:0,58,788	0/0:23,0:22:42.54:0,43,535	0/0:12,0:11:23.82:0,24,304	0/1:27,0:27:1.32:1,0,101	0/0:22,0:22:35.84:0,36,427	0/0:19,0:19:48.10:0,48,579	0/0:25,0:23:55.02:0,55,661	0/0:13,0:12:30.91:0,31,372
chr10	43389759	.	AG	A	695.05	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=9.962;DP=715;FS=20.482;HRun=1;HaplotypeScore=115.6393;InbreedingCoeff=0.9547;MQ=48.41;MQ0=34;MQRankSum=-7.601;QD=8.58;ReadPosRankSum=-3.145;VQSLOD=-0.7038;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:27:60:0,60,770	1/1:4,0:3:8.53:65,9,0	0/0:64,0:12:25.29:0,25,287	0/0:81,0:10:16.54:0,17,164	0/0:21,0:19:24.07:0,24,325	1/1:17,2:18:44.64:294,45,0	1/1:28,5:26:33.41:203,33,0	0/0:13,0:13:37.92:0,38,456	1/1:21,4:22:48.35:289,48,0	0/0:20,0:20:53.88:0,54,631	0/0:12,0:12:18.06:0,18,239	0/0:23,0:23:45:0,45,535	0/0:22,0:21:26.52:0,27,238	0/0:23,0:23:37.73:0,38,499	0/0:27,0:27:22.31:0,22,622	0/0:28,0:27:56.57:0,57,677	0/0:33,0:32:72.22:0,72,960	0/0:35,0:32:93.21:0,93,1245	0/0:24,0:22:61.87:0,62,759	0/0:6,0:6:15.03:0,15,177	0/0:32,0:32:57.17:0,57,777	0/0:22,0:21:39.37:0,39,497	0/0:12,0:11:23.82:0,24,304	0/0:27,0:27:9.50:0,9,108	0/0:23,0:23:35.84:0,36,427	0/0:19,0:19:54.07:0,54,635	0/0:25,0:23:55.94:0,56,654	0/0:13,0:12:30.95:0,31,380
chr10	43389787	.	AGAGAGAGAGAGT	A	3233.06	PASS	AB=1.000;AC=25;AF=0.446;AN=56;BaseQRankSum=-5.167;DP=664;FS=5.896;HRun=0;HaplotypeScore=194.8846;InbreedingCoeff=-0.1840;MQ=53.85;MQ0=19;MQRankSum=2.229;QD=6.86;ReadPosRankSum=-5.983;VQSLOD=-0.1883;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:27:99:112,0,585	0/0:4,0:3:4.26:0,4,44	0/0:23,0:8:14.01:0,14,180	0/0:43,0:15:22.29:0,22,314	0/1:22,0:22:99:114,0,231	0/1:23,0:22:99:159,0,236	0/1:37,0:32:10.47:187,0,10	0/1:24,0:21:99:304,0,164	0/1:24,0:21:91.26:284,0,91	0/1:26,0:26:99:176,0,638	0/0:15,0:15:6.02:0,6,185	0/0:22,0:22:9.02:0,9,115	1/1:6,20:25:14.63:496,15,0	1/1:3,15:18:15.51:387,16,0	0/1:30,0:30:99:158,0,848	0/0:33,0:32:31.65:0,32,924	0/0:33,0:32:49.25:0,49,1606	0/1:39,0:36:87.95:88,0,2511	0/1:20,0:18:99:229,0,507	0/1:10,0:10:72.85:73,0,152	0/1:34,0:34:98.61:99,0,1118	1/1:16,0:15:16.13:118,16,0	1/1:4,6:9:2.84:40,3,0	1/1:11,14:25:2.22:111,2,0	0/0:20,0:20:15.05:0,15,415	0/1:18,0:18:68.57:69,0,630	0/1:23,0:22:95.75:96,0,494	0/1:17,0:15:99:111,0,560
chr10	43389791	.	AGAGAGAGT	A	3939.80	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=-4.875;DP=613;FS=0.855;HRun=0;HaplotypeScore=152.5114;InbreedingCoeff=-0.1621;MQ=60.87;MQ0=12;MQRankSum=1.638;QD=8.53;ReadPosRankSum=-1.560;VQSLOD=2.5903;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:26:99:157,0,157	0/1:5,0:4:0.56:40,0,1	0/0:23,0:12:11.31:0,11,216	0/0:31,0:16:28.26:0,28,333	0/1:20,0:20:99:136,0,116	0/1:23,0:22:86.10:256,0,86	1/1:34,0:29:32.07:274,32,0	0/1:27,0:24:71.43:433,0,71	0/1:25,0:22:25.82:337,0,26	0/1:26,0:26:99:265,0,144	0/0:13,0:13:3.01:0,3,66	1/1:4,12:16:3.01:40,3,0	1/1:24,0:23:14.50:279,14,0	1/1:15,0:15:14.91:199,15,0	0/1:31,0:31:99:286,0,191	0/0:31,0:30:7.98:0,8,441	0/0:35,0:34:48.90:0,49,1113	0/1:39,0:36:99:138,0,1435	0/1:19,0:18:99:285,0,252	0/1:11,0:11:24.20:123,0,24	0/1:31,0:31:99:142,0,594	1/1:9,0:8:17.83:134,18,0	1/1:7,0:6:0.10:0,0,0	1/1:18,0:18:3.01:65,3,0	0/0:18,0:18:9.03:0,9,153	0/1:19,0:19:99:133,0,229	0/1:20,0:19:99:107,0,219	0/1:17,0:15:99:112,0,342
chr10	43389795	.	AGAGT	A	5263.13	PASS	AB=1.000;AC=41;AF=0.759;AN=54;BaseQRankSum=-4.758;DP=604;FS=3.497;HRun=0;HaplotypeScore=116.6430;InbreedingCoeff=0.2959;MQ=65.57;MQ0=10;MQRankSum=-1.354;QD=10.57;ReadPosRankSum=2.086;VQSLOD=3.8839;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:24:30.51:251,0,31	1/1:5,0:4:8.03:56,8,0	0/0:26,0:15:20.32:0,20,304	0/0:32,0:18:31.26:0,31,358	1/1:20,0:20:30.36:241,30,0	1/1:23,0:22:29.44:342,29,0	1/1:32,0:28:33.37:269,33,0	1/1:28,0:25:22.19:487,22,0	1/1:26,0:23:37.52:389,38,0	1/1:22,1:23:53.25:508,53,0	./.	1/1:13,0:13:0.47:1,0,0	1/1:23,0:22:11.78:147,12,0	1/1:15,0:15:14.88:119,15,0	1/1:25,2:27:49.92:447,50,0	1/1:9,22:30:15.05:239,15,0	0/0:35,0:34:49.31:0,49,663	0/1:37,0:35:99:193,0,441	0/1:19,0:19:47.42:314,0,47	1/1:11,0:11:23.85:186,24,0	0/1:35,0:35:99:238,0,204	1/1:9,0:8:20.82:157,21,0	0/1:7,0:6:0:0,0,0	1/1:18,0:18:3.01:37,3,0	1/1:17,1:18:3.65:22,4,0	1/1:19,0:19:37.61:298,38,0	0/1:19,0:18:21.10:202,0,21	0/1:16,0:14:96.04:120,0,96
chr10	43389797	.	AGT	A	6000.86	PASS	AB=0.903;AC=41;AF=0.788;AN=52;BaseQRankSum=-2.531;DP=594;FS=1.066;HRun=0;HaplotypeScore=97.3759;InbreedingCoeff=0.4964;MQ=67.59;MQ0=10;MQRankSum=-1.346;QD=12.45;ReadPosRankSum=1.981;VQSLOD=4.7370;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:24:27.82:312,28,0	1/1:5,0:4:8.96:70,9,0	0/0:26,0:16:23.32:0,23,330	0/0:33,0:19:33.99:0,34,384	1/1:17,0:17:30.36:242,30,0	1/1:24,0:23:43.27:370,43,0	1/1:29,0:25:35.55:289,36,0	1/1:27,0:24:45.51:514,46,0	1/1:24,1:23:44.55:378,45,0	1/1:23,0:23:60.49:576,60,0	./.	0/1:13,0:13:0:0,0,0	1/1:23,0:22:11.34:91,11,0	1/1:15,0:15:14.61:88,15,0	1/1:23,0:23:26.97:345,27,0	1/1:30,0:29:13.75:95,14,0	0/0:34,0:33:45.30:0,45,469	0/1:33,1:33:69.04:432,0,69	1/1:24,0:24:31.47:503,31,0	1/1:9,0:9:23.85:186,24,0	0/1:37,0:37:22.29:366,0,22	1/1:9,0:8:20.82:157,21,0	./.	1/1:17,1:18:2.99:23,3,0	0/1:3,15:18:2.89:82,0,3	1/1:0,18:18:48.29:433,48,0	1/1:20,0:19:31.59:271,32,0	0/1:17,0:15:5.44:177,0,5
chr10	43390012	.	G	GGT	2179.51	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=4.825;DP=629;FS=42.483;HRun=0;HaplotypeScore=184.1318;InbreedingCoeff=0.4530;MQ=61.14;MQ0=4;MQRankSum=-5.946;QD=7.59;ReadPosRankSum=-5.656;VQSLOD=0.9881;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:50.22:0,50,512	0/0:11,0:10:14.91:0,15,171	0/0:25,0:15:35.74:0,36,391	0/0:34,0:19:43.69:0,44,545	1/1:8,16:27:2.70:12,3,0	0/0:20,0:19:25.64:0,26,344	0/0:20,0:20:16.99:0,17,277	1/1:11,18:29:57.85:745,58,0	0/0:18,0:17:7.37:0,7,205	0/0:24,0:24:17.79:0,18,614	0/1:13,0:13:6.92:7,0,150	0/1:25,0:25:1.61:2,0,357	0/1:25,0:25:58.42:58,0,291	0/0:20,0:20:26.62:0,27,375	0/0:26,0:26:29.17:0,29,529	0/0:21,0:21:11.48:0,11,415	0/0:33,0:33:53.41:0,53,905	0/1:12,0:12:40.82:41,0,200	1/1:18,1:19:47.97:529,48,0	1/1:7,14:21:14.41:125,14,0	1/1:24,4:28:31.94:358,32,0	0/0:21,0:20:12.78:0,13,225	0/1:13,0:13:7.29:7,0,89	0/0:32,0:32:45.20:0,45,460	0/1:20,0:20:30.96:31,0,239	0/1:25,0:25:73.95:74,0,419	1/1:8,14:22:20.83:204,21,0	1/1:1,6:7:12.04:178,12,0
chr10	43390020	.	C	CGT	3402.69	PASS	AB=0.699;AC=43;AF=0.796;AN=54;BaseQRankSum=-0.551;DP=653;FS=1.598;HRun=0;HaplotypeScore=155.9853;InbreedingCoeff=0.2313;MQ=54.43;MQ0=6;MQRankSum=-0.511;QD=6.37;ReadPosRankSum=2.767;VQSLOD=3.2333;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:34,0:33:4.62:46,5,0	1/1:11,0:10:3.01:34,3,0	0/0:24,0:14:3:0,3,27	./.	1/1:28,0:27:2.74:12,3,0	1/1:14,0:26:8.91:78,9,0	1/1:12,2:31:19.09:182,19,0	0/0:25,0:24:1.67:0,2,4	1/1:9,0:19:11.74:89,12,0	1/1:24,0:24:11.95:94,12,0	1/1:13,0:13:3:25,3,0	1/1:10,15:25:14.64:525,15,0	0/1:11,16:27:93.20:372,0,93	0/1:10,9:19:21.76:125,0,22	1/1:25,0:25:5.78:43,6,0	0/1:21,0:21:0:0,0,0	0/0:33,0:37:67.97:0,68,616	1/1:14,0:14:7.22:67,7,0	1/1:21,0:20:8.71:66,9,0	1/1:20,0:23:8.42:48,8,0	1/1:26,0:26:2.69:8,3,0	0/1:9,11:21:5.57:306,0,6	0/1:3,10:14:6.56:254,0,7	1/1:12,22:35:48.16:733,48,0	1/1:21,0:21:9.96:78,10,0	1/1:23,0:23:9.36:48,9,0	1/1:18,0:21:12.36:102,12,0	1/1:7,0:9:8.87:66,9,0
chr10	43392446	.	AAAGGGAAGGG	A	588.25	PASS	AC=12;AF=0.500;AN=24;BaseQRankSum=2.790;DP=575;FS=10.726;HRun=0;HaplotypeScore=171.1764;InbreedingCoeff=0.5208;MQ=72.72;MQ0=8;MQRankSum=-3.421;QD=4.09;ReadPosRankSum=0.995;VQSLOD=2.2934;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:43:24.08:0,24,1065	./.	./.	./.	0/0:21,0:20:6.02:0,6,267	0/0:8,0:10:3.01:0,3,30	0/0:16,0:16:1.25:0,1,3	./.	./.	./.	./.	0/0:22,0:23:3:0,3,26	./.	1/1:15,2:17:3.01:87,3,0	1/1:29,0:29:6.49:81,6,0	1/1:30,0:30:12.04:212,12,0	./.	./.	./.	./.	0/0:33,0:31:3.01:0,3,102	1/1:25,5:30:9.03:157,9,0	1/1:14,0:14:3.01:87,3,0	./.	./.	1/1:24,0:24:3.48:70,3,0	./.	./.
chr10	43393084	.	TA	T	6073	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=12.972;DP=716;FS=4.132;HRun=6;HaplotypeScore=70.7391;InbreedingCoeff=0.9998;MQ=71.44;MQ0=0;MQRankSum=-0.920;QD=27.11;ReadPosRankSum=3.177;VQSLOD=5.5135;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,50:55:99:1419,132,0	0/0:9,0:9:27.06:0,27,337	0/0:20,0:20:48.12:0,48,606	0/0:22,0:21:48.11:0,48,581	0/0:24,0:24:72.23:0,72,947	0/0:31,0:31:90.29:0,90,1184	0/0:28,0:28:81.22:0,81,1040	0/0:25,0:25:66.21:0,66,856	0/0:26,0:26:75.24:0,75,986	1/1:4,26:30:75.13:786,75,0	1/1:3,18:21:54.13:580,54,0	0/0:22,0:22:60.20:0,60,789	0/0:28,0:28:78.23:0,78,1010	0/0:22,0:22:57.17:0,57,732	1/1:1,26:27:72.18:774,72,0	1/1:1,18:19:54.14:580,54,0	0/0:41,0:41:99:0,117,1503	1/1:3,19:22:54.13:580,54,0	0/0:19,0:19:51.17:0,51,670	0/0:25,0:25:66.21:0,66,868	0/0:26,0:26:72.23:0,72,936	0/0:22,0:22:57.18:0,57,745	0/0:33,0:33:96.30:0,96,1247	0/0:32,0:32:90.29:0,90,1181	1/1:1,24:25:59.69:644,60,0	1/1:3,22:25:66.16:709,66,0	0/0:22,0:22:57.19:0,57,750	0/0:15,0:15:45.15:0,45,592
chr10	43393236	.	C	CA	2016.40	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-5.859;DP=699;FS=10.099;HRun=6;HaplotypeScore=101.3596;InbreedingCoeff=0.9972;MQ=65.27;MQ0=6;MQRankSum=0.288;QD=30.55;ReadPosRankSum=1.921;VQSLOD=3.2332;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,117,1171	0/0:11,0:11:30.04:0,30,297	0/0:34,0:21:33.39:0,33,386	0/0:44,1:31:61.96:0,62,574	0/0:33,0:33:93.15:0,93,927	1/1:1,26:27:66.21:830,66,0	1/1:0,22:22:60.14:755,60,0	0/0:27,0:27:51.08:0,51,520	1/1:1,16:17:20.60:573,21,0	0/0:31,0:31:75.16:0,75,760	0/0:12,0:12:30.07:0,30,306	0/0:22,0:22:60.13:0,60,612	0/0:32,0:31:69.14:0,69,704	0/0:14,0:14:39.08:0,39,392	0/0:28,0:28:78.16:0,78,789	0/0:22,0:22:60.13:0,60,612	0/0:34,0:34:99:0,99,1003	0/0:25,0:25:72.13:0,72,725	0/0:22,0:21:57.10:0,57,569	0/0:18,0:18:48.10:0,48,489	0/0:28,0:28:63.13:0,63,642	0/0:25,0:25:60.07:0,60,594	0/0:17,0:17:42.09:0,42,428	0/0:30,0:30:87.17:0,87,879	0/0:18,0:18:54.11:0,54,544	0/0:21,0:21:54.11:0,54,551	0/0:31,0:31:87.20:0,87,887	0/0:9,0:9:24.05:0,24,244
chr10	43393723	.	CA	C	1947.70	PASS	AB=0.786;AC=27;AF=0.482;AN=56;BaseQRankSum=6.370;DP=471;FS=1.721;HRun=14;HaplotypeScore=68.2167;InbreedingCoeff=0.5988;MQ=74.47;MQ0=0;MQRankSum=-1.016;QD=7.06;ReadPosRankSum=1.359;VQSLOD=2.7521;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,2:18:24.29:0,24,351	0/0:2,0:6:5.68:0,6,29	0/0:19,0:13:5.78:0,6,80	0/1:13,0:8:2.43:2,0,35	0/1:9,13:26:24.82:252,0,25	0/0:2,0:18:42.94:0,43,243	0/0:6,0:13:37.65:0,38,229	1/1:9,15:25:43.52:289,44,0	0/0:5,0:13:24.91:0,25,164	0/1:16,3:19:22.84:23,0,226	0/0:11,1:13:6.28:0,6,187	1/1:2,1:11:21.30:73,21,0	1/1:3,0:10:14.25:41,14,0	1/1:3,1:18:27.40:91,27,0	0/1:7,3:19:32.66:33,0,173	0/0:3,0:11:22.73:0,23,115	0/0:21,0:23:53.86:0,54,474	0/0:17,1:18:12.37:0,12,322	1/1:6,16:24:13.17:289,13,0	1/1:3,11:15:6.89:183,7,0	1/1:1,6:9:21.92:135,22,0	1/1:2,1:12:24.28:94,24,0	1/1:1,0:22:34.51:100,35,0	1/1:0,0:9:18.33:53,18,0	0/0:23,2:25:22:0,22,472	0/0:17,1:18:27.37:0,27,381	1/1:5,21:29:18.95:358,19,0	0/1:5,9:15:23.88:138,0,24
chr10	43394448	.	AACACAC	A	3789.27	PASS	AB=0.800;AC=33;AF=0.660;AN=50;BaseQRankSum=7.480;DP=534;FS=12.373;HRun=0;HaplotypeScore=150.7320;InbreedingCoeff=0.7503;MQ=68.01;MQ0=10;MQRankSum=-7.942;QD=11.88;ReadPosRankSum=0.691;VQSLOD=2.4254;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:21,6:29:6.01:103,6,0	1/1:4,0:7:9.03:126,9,0	./.	./.	0/0:11,0:14:17.19:0,17,271	1/1:8,0:17:21.07:293,21,0	1/1:16,0:18:6.49:84,6,0	0/0:22,0:22:12.03:0,12,185	1/1:16,0:26:36.12:502,36,0	1/1:7,6:14:14.88:290,15,0	./.	1/1:15,0:22:21.07:293,21,0	1/1:10,0:17:18.06:251,18,0	1/1:8,0:18:21.07:290,21,0	1/1:14,8:21:12.04:244,12,0	1/1:13,8:22:21.07:408,21,0	0/0:24,0:24:42.14:0,42,1215	0/1:12,4:16:15.05:55,0,15	0/0:10,0:15:15.05:0,15,223	0/0:7,0:9:8.16:0,8,149	0/0:24,0:36:27.07:0,27,445	1/1:13,0:19:15.05:210,15,0	1/1:7,0:7:3.01:42,3,0	1/1:24,0:32:9.39:126,9,0	1/1:5,7:12:19.61:370,20,0	1/1:15,1:18:6.02:103,6,0	0/0:13,0:23:39.09:0,39,472	0/0:3,0:5:3.01:0,3,38
chr10	43396645	.	CG	C	3664.28	PASS	AB=0.800;AC=27;AF=0.964;AN=28;BaseQRankSum=-1.732;DP=126;FS=4.565;HRun=4;HaplotypeScore=21.8204;InbreedingCoeff=-0.0990;MQ=68.43;MQ0=0;MQRankSum=-1.732;QD=29.79;ReadPosRankSum=0.790;VQSLOD=2.2711;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,7:7:18.06:216,18,0	1/1:0,1:1:3.01:36,3,0	./.	0/1:3,1:3:12.54:30,0,13	./.	./.	1/1:1,13:14:36.11:432,36,0	1/1:0,3:3:9.03:108,9,0	./.	./.	./.	./.	./.	1/1:0,2:2:3.01:36,3,0	./.	./.	1/1:1,17:18:51.16:612,51,0	1/1:0,14:14:39.12:468,39,0	1/1:0,5:5:15.05:180,15,0	./.	1/1:3,30:33:78.24:935,78,0	./.	./.	1/1:0,14:14:36.11:432,36,0	1/1:1,3:4:3.01:36,3,0	1/1:0,3:3:9.03:108,9,0	1/1:0,1:1:3.01:36,3,0	./.
chr10	43398218	.	G	GT	4236.24	PASS	AB=0.713;AC=33;AF=0.589;AN=56;BaseQRankSum=-6.071;DP=501;FS=1.343;HRun=12;HaplotypeScore=122.9579;InbreedingCoeff=0.4329;MQ=68.24;MQ0=2;MQRankSum=-0.261;QD=12.80;ReadPosRankSum=1.795;VQSLOD=4.3188;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,12:18:32.69:303,33,0	1/1:4,11:15:6.41:214,6,0	0/0:26,0:18:11.04:0,11,102	0/1:19,1:15:12.58:13,0,48	0/1:12,12:23:24.23:253,0,24	1/1:6,3:9:10.11:91,10,0	1/1:6,4:10:15.32:125,15,0	1/1:6,15:21:44.74:400,45,0	1/1:2,0:2:3:29,3,0	0/0:25,0:25:29.37:0,29,232	0/1:24,1:27:26.07:26,0,231	1/1:8,3:11:19.35:168,19,0	0/1:5,10:15:15.62:173,0,16	1/1:4,9:14:4.77:196,5,0	0/0:18,0:18:30.78:0,31,193	0/0:13,0:13:23:0,23,138	0/0:28,0:28:71.16:0,71,474	0/0:18,1:19:3.64:0,4,190	0/1:11,11:24:5.36:355,0,5	1/1:12,10:22:38.15:342,38,0	1/1:5,2:7:2.29:53,2,0	0/1:2,7:9:0.45:145,0,0	0/1:6,13:19:4.69:268,0,5	1/1:5,5:10:16.80:150,17,0	0/0:23,1:25:14:0,14,233	0/0:12,1:14:25.81:0,26,177	1/1:14,14:28:23.09:369,23,0	1/1:9,15:26:36.96:564,37,0
chr10	43398251	.	TTTTC	T	1503.35	PASS	AB=0.984;AC=13;AF=0.232;AN=56;BaseQRankSum=3.932;DP=560;FS=1.469;HRun=0;HaplotypeScore=149.4748;InbreedingCoeff=-0.1630;MQ=52.19;MQ0=39;MQRankSum=-6.120;QD=5.18;ReadPosRankSum=2.734;VQSLOD=2.6370;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:20:9.26:214,0,9	0/0:11,0:11:17.73:0,18,221	0/1:46,0:18:5.82:6,0,163	0/0:49,0:15:17.88:0,18,269	0/1:22,0:18:3.15:3,0,293	0/0:11,0:10:10.05:0,10,260	0/0:11,0:9:16.67:0,17,215	0/1:39,0:35:10.12:10,0,398	0/0:4,0:2:2.60:0,3,10	0/1:19,1:19:40.66:300,0,41	0/1:30,1:26:98.56:310,0,99	0/0:10,0:8:4.63:0,5,142	0/0:12,0:10:25.76:0,26,273	0/0:14,0:11:29.69:0,30,333	0/1:15,1:15:22.80:217,0,23	0/1:19,0:15:92.68:128,0,93	0/0:35,0:31:52.81:0,53,753	0/1:16,0:13:27.09:41,0,27	0/0:23,0:19:33.10:0,33,510	0/1:21,0:20:23.70:24,0,241	0/0:3,0:2:2.97:0,3,24	0/0:10,0:8:20.02:0,20,166	0/0:17,0:15:15.28:0,15,268	0/0:9,0:8:13.28:0,13,192	0/1:26,1:25:86.27:273,0,86	1/1:11,0:10:1.55:122,2,0	0/0:26,0:21:40.22:0,40,480	0/0:25,0:20:59.91:0,60,674
chr10	43398252	.	TTTC	T	1060.78	PASS	AB=0.977;AC=15;AF=0.268;AN=56;BaseQRankSum=4.272;DP=560;FS=16.916;HRun=0;HaplotypeScore=141.1733;InbreedingCoeff=-0.2807;MQ=51.64;MQ0=45;MQRankSum=-8.068;QD=3.49;ReadPosRankSum=1.605;VQSLOD=1.2893;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:20,1:19:16.86:145,0,17	0/0:10,0:10:17.35:0,17,183	0/1:44,0:16:0.86:1,0,150	0/0:49,0:15:16.49:0,16,220	0/1:22,0:18:20.78:21,0,222	0/0:11,0:10:7.24:0,7,183	0/0:12,0:9:1.65:0,2,145	0/1:38,0:34:22.98:23,0,328	1/1:4,0:2:1.55:4,2,0	0/1:18,3:19:50.65:234,0,51	0/1:31,1:26:99:226,0,110	0/1:11,0:8:21.07:21,0,96	0/0:12,0:10:22.58:0,23,230	0/0:14,0:11:29.22:0,29,257	0/1:15,1:15:26.86:148,0,27	0/1:20,0:15:99:100,0,102	0/0:35,0:31:5.76:0,6,547	0/1:17,0:13:7.23:7,0,32	0/0:23,0:19:19.55:0,20,409	0/1:21,0:20:34.96:35,0,147	0/0:3,0:2:2.97:0,3,24	0/0:10,0:7:8.19:0,8,105	0/0:17,0:15:11.77:0,12,194	0/0:10,0:8:1.79:0,2,136	0/1:25,1:24:99:185,0,100	0/1:11,0:10:10.96:54,0,11	0/0:25,0:20:39.72:0,40,378	0/0:25,0:20:59.86:0,60,593
chr10	43398253	.	TTC	T	928.38	PASS	AB=0.992;AC=19;AF=0.339;AN=56;BaseQRankSum=5.023;DP=555;FS=40.212;HRun=0;HaplotypeScore=131.5131;InbreedingCoeff=-0.4138;MQ=51.26;MQ0=50;MQRankSum=-9.275;QD=2.70;ReadPosRankSum=2.206;VQSLOD=1.1860;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:21,0:18:29.01:118,0,29	0/0:9,0:9:15.89:0,16,140	0/0:44,0:16:0.47:0,0,135	0/0:49,0:15:15.56:0,16,169	0/1:21,0:17:27.60:28,0,159	0/0:11,0:10:2.68:0,3,105	0/1:12,0:9:6.40:6,0,89	0/1:35,1:32:71.78:72,0,261	1/1:4,0:2:2.97:20,3,0	0/1:19,2:18:44.31:172,0,44	0/1:31,1:26:99:158,0,143	0/1:13,0:9:35.05:35,0,66	0/0:12,0:10:7.58:0,8,170	0/0:13,0:10:20.23:0,20,176	0/1:15,0:14:31.79:110,0,32	0/1:21,0:15:77.13:77,0,103	0/1:35,0:31:42.52:43,0,401	0/1:18,0:13:7.03:7,0,36	0/0:22,0:18:25.83:0,26,337	0/1:21,0:20:32.51:33,0,78	0/0:3,0:2:2.97:0,3,24	0/1:10,0:7:2.92:3,0,67	0/1:17,0:15:6.83:7,0,104	0/1:10,0:8:17.25:17,0,86	0/1:26,0:24:99:140,0,105	0/1:11,0:10:27.05:33,0,27	0/0:23,0:18:34.06:0,34,273	0/0:25,0:20:59.75:0,60,514
chr10	43398257	.	T	TTTTTTC	2957.78	PASS	AB=1.000;AC=16;AF=0.286;AN=56;BaseQRankSum=-3.948;DP=604;FS=11.094;HRun=0;HaplotypeScore=170.3958;InbreedingCoeff=0.7177;MQ=45.32;MQ0=86;MQRankSum=-3.041;QD=14.86;ReadPosRankSum=-1.090;VQSLOD=2.3020;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:19:19.73:0,20,341	0/0:10,0:9:19.61:0,20,143	0/0:43,0:15:6.99:0,7,123	0/0:46,0:11:8.81:0,9,166	1/1:25,1:20:36.38:506,36,0	0/0:12,0:10:20.78:0,21,179	0/0:14,0:9:13.24:0,13,172	0/1:41,0:34:20.11:395,0,20	1/1:5,0:2:1.25:3,1,0	0/0:26,0:22:41.41:0,41,478	0/0:34,0:27:49.50:0,50,507	0/0:14,0:9:21.02:0,21,315	0/0:12,0:9:16.25:0,16,192	0/0:15,0:10:27.03:0,27,376	0/0:16,0:14:23.49:0,23,220	0/0:25,0:16:38.81:0,39,307	0/0:38,0:31:57.98:0,58,978	0/1:21,0:14:2.04:2,0,99	1/1:24,2:20:34.36:615,34,0	1/1:23,0:22:28.34:391,28,0	1/1:6,0:2:2.99:24,3,0	0/0:9,0:6:15.05:0,15,272	0/0:16,0:14:31.42:0,31,345	0/0:11,0:8:17.92:0,18,218	0/0:30,0:25:39.90:0,40,475	0/0:10,0:9:9.70:0,10,157	1/1:22,0:17:36.17:665,36,0	1/1:25,4:20:4.57:534,5,0
chr10	43398258	.	T	TTTTTC	2441.48	PASS	AB=0.988;AC=14;AF=0.250;AN=56;BaseQRankSum=-2.837;DP=604;FS=9.068;HRun=0;HaplotypeScore=162.3898;InbreedingCoeff=0.6061;MQ=44.96;MQ0=90;MQRankSum=-2.988;QD=13.64;ReadPosRankSum=-0.266;VQSLOD=2.4797;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:19:18.05:0,18,320	0/0:10,0:9:20.15:0,20,133	0/0:42,0:14:1.80:0,2,104	0/0:46,0:11:4.85:0,5,187	1/1:26,0:20:31.51:445,32,0	0/0:12,0:10:23.61:0,24,170	0/0:15,0:10:11.78:0,12,156	0/1:39,1:33:42.90:237,0,43	1/1:5,0:2:0.47:1,0,0	0/0:26,0:22:39.98:0,40,465	0/0:36,0:28:42.96:0,43,488	0/0:14,0:9:21.02:0,21,301	0/0:11,0:8:16.58:0,17,204	0/0:15,0:10:27.03:0,27,361	0/0:16,0:14:20.55:0,21,206	0/0:24,0:15:35.62:0,36,296	0/0:39,0:31:67.16:0,67,983	0/0:21,0:14:0.04:0,0,90	1/1:23,3:20:39.81:585,40,0	0/1:23,0:22:5.15:253,0,5	1/1:6,0:2:2.99:24,3,0	0/0:9,0:6:15.05:0,15,249	0/0:16,0:14:32.96:0,33,367	0/0:10,0:7:17.92:0,18,209	0/0:29,0:24:34.80:0,35,456	0/0:10,0:9:2:0,2,145	1/1:22,1:17:17.66:578,18,0	1/1:29,1:20:10.26:482,10,0
chr10	43398273	.	TGG	T	2148.76	PASS	AB=0.907;AC=25;AF=0.446;AN=56;BaseQRankSum=3.761;DP=534;FS=0.000;HRun=2;HaplotypeScore=102.7604;InbreedingCoeff=-0.4695;MQ=30.86;MQ0=93;MQRankSum=1.527;QD=4.60;ReadPosRankSum=1.384;VQSLOD=-0.5438;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:19,1:15:28.60:106,0,29	0/0:8,0:7:15.01:0,15,145	0/1:24,0:3:3.81:4,0,32	0/0:35,0:7:3.84:0,4,82	0/1:21,4:19:90.29:170,0,90	0/1:9,2:9:34.64:35,0,93	0/1:15,2:12:67.14:98,0,67	0/1:33,6:29:67.54:68,0,257	0/0:5,0:2:0.89:0,1,2	0/1:23,2:21:61.75:111,0,62	1/1:24,5:21:35.11:342,35,0	0/0:14,0:9:9.18:0,9,110	0/1:9,0:6:3.55:30,0,4	0/1:13,0:8:17.50:27,0,17	0/1:19,2:19:48.20:165,0,48	0/1:14,6:11:0.96:150,0,1	0/1:37,1:30:67.04:67,0,303	0/1:13,7:13:46.33:46,0,106	0/1:23,2:18:99:139,0,172	0/1:14,7:20:99:178,0,152	0/0:5,0:1:2.99:0,3,24	0/1:11,0:8:14.68:15,0,37	0/1:12,0:10:8.78:9,0,78	0/1:11,0:7:7.59:8,0,54	1/1:23,0:18:17.03:164,17,0	0/1:7,5:11:28.57:158,0,29	0/1:19,2:14:5.60:162,0,6	0/1:20,0:9:50.28:50,0,192
chr10	43398416	.	AAATGAATGAATG	A	6469.40	PASS	AB=0.598;AC=25;AF=0.446;AN=56;BaseQRankSum=3.361;DP=467;FS=1.044;HRun=0;HaplotypeScore=169.0689;InbreedingCoeff=0.5067;MQ=58.52;MQ0=4;MQRankSum=-5.921;QD=25.27;ReadPosRankSum=2.713;VQSLOD=3.9861;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,15:22:21.07:582,21,0	0/1:3,0:9:7.95:8,0,25	0/0:13,0:9:9.03:0,9,257	0/0:8,0:8:9.02:0,9,299	0/1:3,0:17:5.70:6,0,159	0/1:7,0:13:3.53:4,0,49	0/1:5,0:19:6.77:7,0,59	0/0:12,0:19:23.85:0,24,379	0/1:4,0:12:12.81:13,0,83	1/1:11,12:23:36.12:1041,36,0	1/1:3,11:14:27.05:681,27,0	0/0:6,0:13:21.07:0,21,603	0/0:6,0:22:30.10:0,30,1471	0/0:4,0:15:30.10:0,30,1273	1/1:4,17:21:39.13:1318,39,0	1/1:4,11:15:9.03:313,9,0	0/0:20,0:20:48.16:0,48,2502	1/1:3,11:14:12.04:421,12,0	0/0:14,0:23:11.82:0,12,271	0/1:8,0:22:6.88:7,0,137	0/0:11,0:16:9.02:0,9,115	0/0:8,0:16:39.13:0,39,1209	0/0:10,0:22:30.10:0,30,1161	0/0:12,0:21:24.08:0,24,635	1/1:7,12:19:21.07:736,21,0	1/1:1,15:16:45.15:1319,45,0	0/1:4,0:13:7.87:8,0,48	1/1:1,0:4:2.49:7,2,0
chr10	43398705	.	ACTCACT	A	3190.46	PASS	AB=0.993;AC=22;AF=0.393;AN=56;BaseQRankSum=3.149;DP=580;FS=0.789;HRun=0;HaplotypeScore=157.2034;InbreedingCoeff=0.2350;MQ=73.05;MQ0=11;MQRankSum=-2.520;QD=11.08;ReadPosRankSum=4.988;VQSLOD=2.4900;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:8.23:0,8,200	0/1:3,0:3:9.99:10,0,39	0/0:39,0:26:50.84:0,51,514	0/0:56,0:29:36.13:0,36,550	0/0:8,0:6:8.99:0,9,74	0/1:12,0:12:15.48:15,0,155	0/1:24,0:23:58.45:58,0,347	0/0:40,0:39:99:0,114,1021	0/1:13,0:13:7.34:7,0,114	0/0:12,0:12:1.13:0,1,110	0/1:9,0:8:9.70:10,0,32	1/1:21,3:25:59.59:706,60,0	1/1:16,2:19:44.68:528,45,0	1/1:13,2:15:35.81:359,36,0	0/1:25,0:26:99:229,0,238	0/1:28,0:29:99:309,0,170	0/0:28,0:28:46.78:0,47,773	0/1:16,0:16:9.26:9,0,239	0/0:19,0:18:52.45:0,52,606	0/0:11,0:10:17.95:0,18,144	0/0:26,0:25:13.30:0,13,255	1/1:11,1:13:24.44:201,24,0	1/1:19,0:19:44.90:429,45,0	1/1:31,1:31:45.04:436,45,0	0/1:15,0:15:20.83:21,0,121	0/1:18,0:18:53.16:53,0,171	0/0:18,0:17:29.49:0,29,339	0/0:16,0:15:41.54:0,42,351
chr10	43398709	.	ACTCTCTCTCTCT	A	3878.49	PASS	AB=1.000;AC=15;AF=0.278;AN=54;BaseQRankSum=5.127;DP=575;FS=3.088;HRun=0;HaplotypeScore=209.0912;InbreedingCoeff=0.7117;MQ=68.79;MQ0=13;MQRankSum=-4.859;QD=29.16;ReadPosRankSum=4.190;VQSLOD=3.1104;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:18,1:19:11.85:170,12,0	0/0:3,0:3:3:0,3,25	./.	0/0:55,0:28:3:0,3,25	0/0:7,0:5:3.01:0,3,69	0/0:11,0:12:21.07:0,21,496	0/0:21,0:21:18.06:0,18,323	0/0:42,0:41:21.91:0,22,615	0/0:14,0:14:21.07:0,21,509	1/1:8,0:8:2.65:103,3,0	1/1:8,1:8:8.99:177,9,0	0/0:24,0:24:21.06:0,21,337	0/0:18,0:18:21.53:0,22,311	0/0:15,0:15:17.97:0,18,184	1/1:17,5:26:39.11:1101,39,0	1/1:21,5:26:48.14:1466,48,0	0/0:28,0:28:36.09:0,36,1230	0/1:15,0:15:82.88:218,0,83	0/0:22,0:21:18.05:0,18,646	0/0:13,0:12:0.47:0,0,1	0/0:27,0:25:12.02:0,12,311	0/0:14,0:14:11.91:0,12,224	0/0:22,0:22:15:0,15,284	0/0:30,0:29:15:0,15,242	1/1:10,4:14:8.98:226,9,0	1/1:13,2:16:14.70:419,15,0	0/0:20,0:19:31.35:0,31,763	0/0:18,0:17:12.02:0,12,323
chr10	43398740	.	CT	C	350.41	PASS	AB=0.889;AC=11;AF=0.204;AN=54;BaseQRankSum=7.815;DP=464;FS=4.965;HRun=1;HaplotypeScore=120.8032;InbreedingCoeff=0.2772;MQ=39.97;MQ0=30;MQRankSum=-4.609;QD=2.94;ReadPosRankSum=4.271;VQSLOD=0.2166;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,2:13:9.17:61,9,0	0/0:4,0:2:3.01:0,3,37	0/0:12,0:1:3.01:0,3,38	0/0:16,0:2:3.01:0,3,38	0/0:9,0:6:2.86:0,3,26	0/0:18,0:17:17.02:0,17,147	0/0:22,0:21:31.74:0,32,336	0/0:32,0:28:69.18:0,69,886	0/0:20,0:19:21.34:0,21,245	0/1:6,1:7:11.13:11,0,158	1/1:6,4:8:8.09:43,8,0	0/0:16,0:16:28.54:0,29,291	0/0:13,0:13:32.31:0,32,344	0/0:18,0:16:26.47:0,26,285	0/1:28,2:29:36.04:144,0,36	0/1:15,6:21:78.06:142,0,78	0/0:26,0:25:48.15:0,48,630	0/1:8,1:8:35.23:35,0,79	0/0:12,0:11:32.99:0,33,375	./.	0/0:24,0:21:12:0,12,125	0/0:20,0:19:11.22:0,11,138	0/0:14,0:11:23.93:0,24,263	0/0:23,0:22:20.78:0,21,243	1/1:5,2:7:7.52:54,8,0	0/1:20,1:18:8.62:9,0,376	0/0:28,0:27:45.02:0,45,539	0/0:11,0:7:20.98:0,21,249
chr10	43398742	.	CTCTCTCTCTCCCCTCCTCCT	C	4138.67	PASS	AB=0.952;AC=14;AF=0.250;AN=56;BaseQRankSum=10.738;DP=458;FS=6.967;HRun=0;HaplotypeScore=204.9181;InbreedingCoeff=0.3634;MQ=39.20;MQ0=33;MQRankSum=-5.154;QD=34.49;ReadPosRankSum=2.953;VQSLOD=1.6701;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:11,1:11:36.71:69,0,37	0/0:5,0:1:3.01:0,3,39	0/0:13,0:1:3.01:0,3,131	0/0:16,0:2:6.02:0,6,262	0/0:9,0:6:2.93:0,3,39	0/0:18,0:17:29.66:0,30,489	0/0:23,0:21:52.75:0,53,842	0/0:31,0:27:10.57:0,11,929	0/0:20,0:19:27.88:0,28,404	1/1:7,0:7:1.28:256,1,0	1/1:8,2:8:6.02:80,6,0	0/0:16,0:16:28.48:0,28,536	0/0:14,0:14:34.37:0,34,709	0/0:17,0:15:19.63:0,20,751	0/1:26,2:27:32.63:1035,0,33	1/1:14,6:20:57.20:1608,57,0	0/0:26,0:25:48.15:0,48,2000	0/1:8,0:7:45.41:220,0,45	0/0:13,0:11:19.34:0,19,665	1/1:6,0:5:2.94:18,3,0	0/0:23,0:20:8.99:0,9,237	0/0:20,0:19:16.79:0,17,174	0/0:13,0:10:5.58:0,6,165	0/0:22,0:21:12.44:0,12,541	1/1:8,1:9:12:176,12,0	0/1:19,1:17:87.66:676,0,88	0/0:28,0:27:5.98:0,6,548	0/0:11,0:7:15.27:0,15,384
chr10	43398752	.	C	CT	180.15	PASS	AB=0.930;AC=9;AF=0.161;AN=56;BaseQRankSum=3.313;DP=488;FS=2.522;HRun=1;HaplotypeScore=129.7579;InbreedingCoeff=-0.0068;MQ=42.05;MQ0=30;MQRankSum=-1.022;QD=1.20;ReadPosRankSum=2.177;VQSLOD=-0.7390;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:17:8.62:0,9,59	0/0:5,0:1:3.01:0,3,34	0/0:14,0:2:6.02:0,6,76	0/0:19,0:4:9.03:0,9,116	0/1:11,0:9:0:0,0,0	0/0:17,0:16:19.98:0,20,167	0/0:24,0:23:31.57:0,32,277	0/0:27,0:23:37.60:0,38,438	0/0:18,0:18:11.50:0,12,102	0/1:10,0:10:0.44:0,0,47	1/1:12,0:11:2.92:17,3,0	0/0:16,0:16:19.26:0,19,180	0/0:12,0:12:30.02:0,30,295	0/0:17,0:15:17.69:0,18,167	0/0:31,0:30:36.68:0,37,243	0/0:29,0:29:7.98:0,8,168	0/1:14,9:22:99:131,0,336	0/0:8,0:7:2.79:0,3,22	0/1:16,1:14:77.04:77,0,77	0/0:7,0:6:2.88:0,3,15	0/1:31,1:29:20.34:20,0,32	0/0:21,0:20:5.59:0,6,29	0/0:12,0:9:5.97:0,6,70	0/0:18,0:17:14.64:0,15,145	0/0:13,0:13:5.80:0,6,35	0/1:23,0:20:8.25:8,0,167	0/1:19,3:21:43.89:44,0,88	0/0:12,0:9:1.62:0,2,30
chr10	43398753	.	CCCTCCTCCT	C	3654.42	PASS	AB=0.692;AC=22;AF=0.423;AN=52;BaseQRankSum=3.865;DP=483;FS=0.000;HRun=0;HaplotypeScore=148.3703;InbreedingCoeff=0.6045;MQ=42.38;MQ0=29;MQRankSum=-6.895;QD=16.17;ReadPosRankSum=2.387;VQSLOD=2.2928;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:7,11:17:7.25:31,0,7	./.	0/0:14,0:2:6.02:0,6,209	0/0:19,0:4:9.03:0,9,371	0/0:2,0:9:2.90:0,3,16	0/0:7,0:15:3.01:0,3,122	0/0:24,0:23:30.03:0,30,378	0/1:19,0:23:3.91:181,0,4	0/0:6,0:18:9.87:0,10,104	1/1:3,7:10:21.07:485,21,0	0/1:6,6:11:0:0,0,0	0/0:16,0:16:26.99:0,27,473	0/0:13,0:13:27.02:0,27,539	0/0:17,0:15:14.93:0,15,361	1/1:16,15:30:27.84:514,28,0	1/1:14,15:29:37.03:947,37,0	0/0:24,0:23:33.11:0,33,1286	1/1:2,5:7:6.02:170,6,0	0/1:10,0:14:15.50:126,0,15	1/1:1,0:3:3.01:57,3,0	./.	0/0:21,0:20:7.28:0,7,105	0/0:12,0:9:5.95:0,6,69	0/0:17,0:16:15.01:0,15,286	1/1:5,8:13:8.94:112,9,0	1/1:11,12:20:36.05:831,36,0	1/1:10,0:21:20.53:126,21,0	1/1:7,0:9:11.80:75,12,0
chr10	43398761	.	CT	C	564.74	PASS	AB=0.977;AC=11;AF=0.196;AN=56;BaseQRankSum=6.553;DP=456;FS=1.326;HRun=1;HaplotypeScore=120.9353;InbreedingCoeff=-0.0751;MQ=44.07;MQ0=25;MQRankSum=-5.750;QD=3.34;ReadPosRankSum=2.697;VQSLOD=0.3496;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:17,0:16:28.18:28,0,37	0/0:4,0:1:3.01:0,3,35	0/0:16,0:3:8.99:0,9,116	0/0:23,0:7:12.04:0,12,185	0/0:10,0:10:2.76:0,3,16	0/0:15,0:14:13.48:0,13,196	0/0:25,0:24:35.07:0,35,381	0/0:24,0:21:41.40:0,41,427	0/0:19,0:19:20.24:0,20,225	0/1:9,1:10:31.25:104,0,31	0/1:12,0:11:0.04:0,0,0	0/0:18,0:17:24.96:0,25,258	0/0:13,0:13:30.05:0,30,367	0/0:17,0:15:17.89:0,18,192	0/1:29,0:28:99:134,0,163	0/1:29,0:29:99:165,0,162	0/1:17,1:17:15.74:16,0,545	1/1:6,0:5:5.64:26,6,0	0/1:13,1:11:36.17:36,0,96	0/0:5,0:4:2.74:0,3,12	0/0:21,1:21:3.01:0,3,43	0/0:19,0:18:5.85:0,6,78	0/0:13,0:11:8.79:0,9,104	0/0:15,0:14:17.77:0,18,181	0/1:13,0:13:24.75:51,0,25	0/1:21,0:19:99:143,0,139	0/0:19,0:19:8.64:0,9,135	0/0:9,1:8:4.06:0,4,64
chr10	43398779	.	CTCA	C	996.26	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=5.101;DP=510;FS=2.571;HRun=0;HaplotypeScore=128.4739;InbreedingCoeff=0.6014;MQ=61.30;MQ0=9;MQRankSum=-5.273;QD=5.60;ReadPosRankSum=8.889;VQSLOD=1.6549;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:26.67:0,27,184	0/0:6,0:4:8.95:0,9,68	0/0:27,0:14:30.03:0,30,296	0/0:29,0:13:32.40:0,32,269	0/0:18,0:18:35.78:0,36,276	0/0:18,0:17:17.99:0,18,185	0/1:22,0:21:88.93:89,0,130	0/0:15,0:14:25.95:0,26,221	0/1:22,0:22:7.02:7,0,131	0/0:17,0:17:35.69:0,36,305	0/0:12,0:12:11.87:0,12,91	1/1:18,1:18:5.96:259,6,0	1/1:15,0:15:30.03:333,30,0	1/1:2,14:16:9.03:135,9,0	0/0:31,0:30:47.41:0,47,405	0/1:25,0:25:12.10:12,0,85	0/0:18,0:18:45.04:0,45,673	0/0:12,0:11:16.52:0,17,137	0/0:17,0:15:10.70:0,11,171	0/0:10,0:10:17.88:0,18,136	0/0:24,0:23:14.97:0,15,123	1/1:3,16:19:2.41:17,2,0	1/1:0,17:17:2.20:19,2,0	1/1:16,0:15:27:283,27,0	0/0:14,0:14:20.35:0,20,145	0/0:23,0:23:25.47:0,25,271	0/0:22,0:22:9.04:0,9,129	1/1:7,0:7:4.88:17,5,0
chr10	43399024	.	G	GA	1725.57	PASS	AB=0.831;AC=39;AF=0.696;AN=56;BaseQRankSum=1.331;DP=551;FS=10.153;HRun=15;HaplotypeScore=82.2888;InbreedingCoeff=0.2720;MQ=75.69;MQ0=3;MQRankSum=-1.638;QD=4.02;ReadPosRankSum=-2.289;VQSLOD=0.0302;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:9,17:27:2.85:122,3,0	1/1:6,0:6:11.45:38,11,0	0/0:38,0:22:15.19:0,15,81	0/0:29,0:15:12.94:0,13,57	1/1:5,0:14:20.10:93,20,0	1/1:7,0:18:6.15:30,6,0	1/1:22,0:24:35.36:160,35,0	1/1:15,0:30:34.27:193,34,0	1/1:9,0:14:8.74:56,9,0	0/1:10,6:19:15.24:85,0,15	1/1:5,13:19:11.79:84,12,0	0/1:13,6:19:4.66:5,0,87	0/1:20,0:20:8.31:8,0,70	0/1:17,1:18:36.74:37,0,44	1/1:13,8:22:32.16:289,32,0	0/1:7,7:14:6.02:64,0,6	0/0:28,0:34:32.42:0,32,262	0/1:9,3:13:3.92:97,0,4	1/1:10,0:22:23.70:113,24,0	1/1:9,0:19:14.33:90,14,0	1/1:14,0:14:13.20:79,13,0	0/0:17,0:18:16.28:0,16,92	0/1:17,0:17:14.44:14,0,27	0/1:11,0:12:2.46:2,0,76	0/1:7,12:19:19.76:60,0,20	1/1:13,6:18:11.92:89,12,0	1/1:15,0:16:13.62:54,14,0	1/1:4,1:11:5.84:39,6,0
chr10	43402913	.	T	TTC	878.18	PASS	AB=0.545;AC=6;AF=0.107;AN=56;BaseQRankSum=5.285;DP=631;FS=3.205;HRun=0;HaplotypeScore=95.5014;InbreedingCoeff=0.2622;MQ=87.27;MQ0=1;MQRankSum=-1.162;QD=9.15;ReadPosRankSum=-0.577;VQSLOD=3.3546;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:35:47.65:0,48,213	0/1:3,0:14:4.74:246,0,5	0/0:25,0:25:69.09:0,69,923	0/0:25,0:25:55.37:0,55,835	0/0:28,0:28:84.24:0,84,1296	1/1:2,1:16:5.31:220,5,0	0/1:4,0:25:45.15:302,0,45	0/0:24,0:24:72.19:0,72,988	0/1:2,0:14:20.48:148,0,20	0/0:5,0:22:35.05:0,35,152	0/0:4,0:16:25.95:0,26,131	0/0:25,0:25:75.23:0,75,1159	0/0:13,0:13:39.13:0,39,620	0/0:19,0:20:55.68:0,56,825	0/0:0,0:20:28.87:0,29,76	0/0:1,0:28:33.05:0,33,138	0/0:26,0:26:78.24:0,78,1224	0/0:1,0:26:27.50:0,27,103	0/0:19,0:19:57.10:0,57,760	0/0:22,0:22:66.20:0,66,1016	0/0:34,0:33:96.19:0,96,1381	0/0:26,0:26:75.22:0,75,1152	0/0:17,0:17:51.17:0,51,807	0/0:31,0:32:91.76:0,92,1395	0/0:6,0:19:29.09:0,29,149	0/1:4,0:27:84.39:84,0,93	0/0:23,0:23:69.22:0,69,1093	0/0:10,0:10:27.08:0,27,431
chr10	43403588	.	AGT	A	8462.73	PASS	AB=0.699;AC=35;AF=0.625;AN=56;BaseQRankSum=10.089;DP=590;FS=0.727;HRun=0;HaplotypeScore=133.0523;InbreedingCoeff=0.7450;MQ=63.24;MQ0=4;MQRankSum=-9.853;QD=23.51;ReadPosRankSum=1.806;VQSLOD=5.6549;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:12,17:28:48.16:652,48,0	1/1:4,8:11:29.67:407,30,0	0/0:32,0:26:65.85:0,66,949	0/0:34,0:28:46.35:0,46,742	0/1:2,0:17:11.20:46,0,11	1/1:2,11:13:33.10:438,33,0	1/1:13,17:30:69.18:918,69,0	1/1:21,0:26:2.06:221,2,0	1/1:2,8:10:9.03:123,9,0	1/1:9,10:19:54.16:703,54,0	1/1:1,9:9:27.09:366,27,0	0/0:18,0:18:48.16:0,48,852	0/0:14,0:14:36.11:0,36,580	0/0:25,0:25:66.23:0,66,1156	1/1:2,22:24:66.20:882,66,0	1/1:4,19:23:42.14:577,42,0	0/0:47,0:47:99:0,129,2157	1/1:7,25:30:78.21:1033,78,0	0/1:10,0:15:11.73:77,0,12	1/1:7,0:15:22.94:106,23,0	0/1:16,0:22:10.76:46,0,11	0/0:8,0:8:21.05:0,21,309	0/0:11,0:11:27.09:0,27,479	0/0:41,0:41:99:0,114,1952	1/1:4,9:13:33.11:452,33,0	1/1:14,19:33:96.26:1266,96,0	1/1:3,0:10:16.88:89,17,0	1/1:2,0:7:13.20:59,13,0
chr10	43403594	.	TGC	T	5592.06	PASS	AB=1.000;AC=37;AF=0.661;AN=56;BaseQRankSum=15.026;DP=567;FS=1.118;HRun=0;HaplotypeScore=141.5664;InbreedingCoeff=0.8776;MQ=60.63;MQ0=3;MQRankSum=-8.385;QD=16.50;ReadPosRankSum=1.019;VQSLOD=5.0917;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:29:31.29:299,31,0	1/1:12,0:11:29.25:216,29,0	0/0:31,0:24:44.03:0,44,616	0/0:32,0:24:8.06:0,8,699	1/1:16,0:16:14.95:131,15,0	1/1:11,0:11:32.78:271,33,0	1/1:26,0:26:65.21:490,65,0	1/1:13,6:19:53.18:674,53,0	1/1:8,0:8:8.88:66,9,0	1/1:19,0:19:35.59:284,36,0	1/1:11,0:10:26.66:197,27,0	0/0:19,0:19:54.12:0,54,966	0/0:12,0:12:35.96:0,36,512	0/0:25,0:25:66.19:0,66,1169	1/1:26,0:26:42.59:487,43,0	1/1:19,0:19:41.52:304,42,0	0/0:48,0:48:99:0,123,2159	0/1:35,0:33:20.89:423,0,21	1/1:11,1:12:26.91:257,27,0	1/1:12,0:12:35.75:262,36,0	1/1:13,4:17:12:135,12,0	0/0:6,0:6:15.02:0,15,251	0/0:12,0:12:30.06:0,30,539	0/0:42,0:42:99:0,123,2049	1/1:14,0:14:7.53:211,8,0	1/1:35,0:35:60.43:592,60,0	1/1:9,1:10:17.92:160,18,0	1/1:7,0:7:20.71:136,21,0
chr10	43403610	.	TGC	T	464.96	PASS	AB=0.938;AC=11;AF=0.196;AN=56;BaseQRankSum=9.481;DP=564;FS=14.361;HRun=0;HaplotypeScore=164.1601;InbreedingCoeff=-0.1384;MQ=56.24;MQ0=11;MQRankSum=-8.312;QD=2.60;ReadPosRankSum=1.554;VQSLOD=1.3029;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:26:36.09:0,36,542	0/1:8,2:9:39.28:78,0,39	0/1:24,0:8:0.24:0,0,155	0/0:33,0:21:11.88:0,12,176	0/1:12,0:12:8.29:10,0,8	0/1:11,5:16:2.94:213,0,3	0/1:17,11:28:99:145,0,158	0/1:25,0:25:75.94:76,0,173	0/1:4,0:4:18.72:19,0,58	0/0:17,0:17:45.11:0,45,760	0/0:12,0:11:27.09:0,27,437	0/0:19,0:19:54.06:0,54,861	0/0:12,0:12:35.97:0,36,588	0/0:20,0:20:57.18:0,57,1045	0/0:30,0:30:80.74:0,81,1105	0/0:16,0:16:39.11:0,39,593	0/0:40,0:40:99:0,111,2000	0/0:35,0:33:81.12:0,81,1356	0/1:15,0:14:14.37:14,0,96	0/0:13,0:13:5.26:0,5,16	0/1:22,0:22:8.96:9,0,47	0/0:7,0:7:18.06:0,18,307	0/0:14,0:14:36.04:0,36,583	0/0:47,0:47:99:0,132,2328	0/0:18,0:18:45.02:0,45,668	0/0:23,0:23:69.12:0,69,1082	0/1:14,0:14:22.91:23,0,52	0/1:9,0:9:18.07:18,0,24
chr10	43403612	.	CGTGTGCGT	C	5217.70	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=8.799;DP=576;FS=3.053;HRun=0;HaplotypeScore=203.8741;InbreedingCoeff=0.9206;MQ=55.80;MQ0=11;MQRankSum=-9.867;QD=28.67;ReadPosRankSum=-2.596;VQSLOD=3.9449;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:26:32.97:0,33,694	1/1:4,0:9:14.85:253,15,0	0/0:25,0:7:8.81:0,9,72	0/0:34,0:21:20.03:0,20,284	1/1:4,8:12:14.98:308,15,0	1/1:7,0:16:33.03:558,33,0	1/1:21,0:28:35.95:521,36,0	1/1:25,0:25:67.87:847,68,0	1/1:3,0:4:6.01:84,6,0	0/0:17,0:17:39.05:0,39,1069	0/0:12,0:11:27.04:0,27,635	0/0:20,0:20:8.91:0,9,1556	0/1:12,0:12:0.53:1,0,1154	0/0:20,0:20:57.13:0,57,1858	0/0:31,0:31:75.04:0,75,1806	0/0:16,0:16:33.05:0,33,862	0/0:40,0:40:99:0,99,3228	0/0:35,0:34:73.52:0,74,2006	1/1:13,3:15:36.38:514,36,0	1/1:5,8:13:26.88:709,27,0	1/1:23,1:24:17.49:270,17,0	0/0:8,0:8:21.04:0,21,541	0/0:14,0:14:29.97:0,30,833	0/0:51,0:51:99:0,129,4361	0/0:18,0:18:45.11:0,45,1165	0/0:23,0:23:66.16:0,66,1912	1/1:8,6:14:30.06:599,30,0	1/1:4,5:9:26.98:555,27,0
chr10	43403618	.	C	CGT	4083.07	PASS	AB=0.825;AC=16;AF=0.286;AN=56;BaseQRankSum=-1.293;DP=580;FS=0.438;HRun=0;HaplotypeScore=152.4988;InbreedingCoeff=0.3411;MQ=57.60;MQ0=12;MQRankSum=-3.005;QD=14.85;ReadPosRankSum=-0.704;VQSLOD=3.1413;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,18:27:26.57:416,27,0	0/0:8,0:8:11.04:0,11,56	0/0:30,0:7:6.02:0,6,51	0/1:37,0:23:0.42:0,0,93	0/0:11,0:11:11.20:0,11,52	0/0:18,0:18:31.66:0,32,188	0/0:27,0:27:22.91:0,23,123	0/1:8,0:24:14.87:15,0,101	0/0:3,0:3:2.84:0,3,14	0/1:8,9:17:5.62:404,0,6	1/1:4,7:11:15.05:227,15,0	0/0:17,0:17:41.42:0,41,482	0/0:11,0:12:35.90:0,36,411	0/0:20,0:20:45.14:0,45,542	1/1:8,22:31:24.02:852,24,0	0/1:11,5:16:42.29:297,0,42	0/0:37,0:37:69.04:0,69,818	0/1:12,21:32:99:651,0,113	0/1:10,0:18:50.54:51,0,59	0/0:11,0:13:25.53:0,26,125	0/0:8,0:24:11.14:0,11,53	0/0:6,0:8:17.89:0,18,195	0/0:12,0:13:24.07:0,24,289	0/0:52,0:53:99:0,108,1257	0/1:5,14:19:0.07:479,0,0	1/1:8,14:23:3.88:686,4,0	0/1:7,0:13:5.17:5,0,81	0/0:7,0:9:19.80:0,20,96
chr10	43405216	.	TCTCTCTCTCACACACA	T	2166.25	PASS	AB=0.974;AC=16;AF=0.286;AN=56;BaseQRankSum=4.143;DP=574;FS=24.147;HRun=0;HaplotypeScore=224.4906;InbreedingCoeff=0.0162;MQ=43.38;MQ0=19;MQRankSum=-3.276;QD=7.82;ReadPosRankSum=-0.773;VQSLOD=1.1990;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:15:16.92:431,17,0	0/0:6,0:6:13.29:0,13,396	0/0:6,0:3:6.02:0,6,105	0/0:8,0:3:4.57:0,5,70	0/0:18,0:18:24.55:0,25,846	0/0:24,0:22:38.88:0,39,1073	0/0:25,0:23:15.99:0,16,436	0/0:34,0:29:76.20:0,76,1836	0/0:23,0:21:28.79:0,29,954	0/1:17,9:25:99:486,0,590	0/1:20,0:19:40.91:84,0,41	0/1:26,0:26:28.79:29,0,134	0/1:14,0:13:16.56:90,0,17	0/1:25,0:24:25.91:26,0,188	0/1:33,0:31:99:452,0,238	0/1:26,0:23:72.28:123,0,72	0/0:33,0:31:64.05:0,64,2945	0/1:18,0:16:99:153,0,361	0/0:20,0:19:26.54:0,27,1190	0/0:21,0:20:26.01:0,26,1329	0/0:12,0:11:12.50:0,12,347	1/1:21,0:21:3.88:25,4,0	0/1:15,0:15:12.62:13,0,54	0/0:41,0:38:10.40:0,10,405	1/1:12,0:12:3.01:70,3,0	0/1:23,0:21:99:348,0,503	0/0:12,0:12:33.05:0,33,1155	0/0:14,0:13:39.12:0,39,1277
chr10	43405222	.	TCTCACACA	T	2796.65	PASS	AB=1.000;AC=27;AF=0.500;AN=54;BaseQRankSum=4.397;DP=527;FS=0.569;HRun=0;HaplotypeScore=161.6502;InbreedingCoeff=0.6066;MQ=41.73;MQ0=21;MQRankSum=-4.446;QD=9.64;ReadPosRankSum=1.064;VQSLOD=2.7551;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:14:15.55:211,16,0	0/0:6,0:6:8.53:0,9,196	1/1:5,0:1:2.04:6,2,0	./.	0/0:18,0:18:21.03:0,21,398	0/0:23,0:21:36.97:0,37,841	0/0:26,0:24:12:0,12,203	0/0:32,0:27:61:0,61,683	0/0:19,0:17:24.07:0,24,654	0/1:21,0:20:56.49:245,0,56	1/1:16,0:15:3.01:52,3,0	1/1:4,22:26:15.02:308,15,0	1/1:2,13:14:14.61:378,15,0	1/1:3,16:18:15.38:370,15,0	1/1:30,0:28:6.52:388,7,0	1/1:19,0:16:5.18:104,5,0	0/0:32,0:30:39.69:0,40,1416	0/1:15,0:13:76.41:102,0,76	0/0:19,0:18:33.12:0,33,600	0/0:21,0:20:29.11:0,29,764	0/0:13,0:11:12.49:0,12,248	1/1:2,19:22:3.95:55,4,0	1/1:3,12:16:5.84:109,6,0	1/1:33,5:36:26.24:338,26,0	1/1:11,0:11:3.01:52,3,0	0/1:18,0:16:65.40:272,0,65	0/0:11,0:11:27.45:0,27,613	0/0:12,0:11:32.99:0,33,637
chr10	43405224	.	TCACACACA	T	3157.98	PASS	AB=0.884;AC=26;AF=0.481;AN=54;BaseQRankSum=3.365;DP=520;FS=1.436;HRun=0;HaplotypeScore=158.9613;InbreedingCoeff=0.6714;MQ=41.93;MQ0=19;MQRankSum=-4.904;QD=11.48;ReadPosRankSum=-0.658;VQSLOD=2.4199;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:16,1:14:18.30:322,18,0	0/0:6,0:6:6.02:0,6,237	./.	0/0:7,0:1:3:0,3,25	0/0:19,0:19:12.04:0,12,420	0/0:26,0:24:33.11:0,33,1134	0/0:26,0:24:6.02:0,6,205	0/0:32,0:28:36.09:0,36,867	0/0:19,0:17:21.07:0,21,793	1/1:18,0:18:21.01:436,21,0	1/1:10,5:15:3.01:70,3,0	0/1:23,1:25:4.83:234,0,5	1/1:13,1:14:14.49:308,14,0	1/1:18,1:18:15.13:281,15,0	1/1:25,3:27:27.09:652,27,0	1/1:9,10:16:5.45:141,5,0	0/0:32,0:31:42.13:0,42,1360	1/1:11,4:13:5.96:150,6,0	0/0:16,0:15:21.07:0,21,646	0/0:19,0:18:23.15:0,23,860	0/0:12,0:10:9.50:0,10,301	1/1:21,1:22:3.95:43,4,0	1/1:16,0:16:5.84:74,6,0	1/1:25,14:36:11.20:169,11,0	1/1:4,5:10:3.01:70,3,0	0/1:13,2:14:23.96:403,0,24	0/0:11,0:11:21.54:0,22,743	0/0:13,0:11:21.07:0,21,700
chr10	43406663	.	TCACACACACACACACACACACA	T	3870.85	PASS	AB=0.944;AC=12;AF=0.214;AN=56;BaseQRankSum=6.791;DP=594;FS=7.949;HRun=0;HaplotypeScore=300.2190;InbreedingCoeff=0.6405;MQ=67.13;MQ0=10;MQRankSum=-5.788;QD=25.30;ReadPosRankSum=0.207;VQSLOD=1.1768;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:25:92.32:92,0,111	0/0:3,0:5:6.02:0,6,190	0/0:23,0:15:6.02:0,6,90	0/0:35,0:28:22.32:0,22,707	0/0:8,0:10:6.02:0,6,244	0/0:15,0:16:27.09:0,27,938	0/0:19,0:21:16.42:0,16,423	0/0:21,0:20:15.04:0,15,516	0/0:10,0:18:25.49:0,25,391	1/1:11,5:15:9.01:373,9,0	1/1:17,2:19:1.36:2,1,0	0/0:27,0:28:40.38:0,40,2762	0/0:6,0:8:18.06:0,18,1037	0/0:14,0:20:21.07:0,21,1330	1/1:12,12:24:15.52:787,16,0	1/1:16,11:28:24.55:1348,25,0	0/0:26,0:26:49.18:0,49,3754	0/0:16,0:16:6.02:0,6,142	0/0:16,0:21:30.10:0,30,1089	0/0:12,0:19:18.06:0,18,503	0/0:57,0:53:77.97:0,78,2596	0/0:18,0:18:33.09:0,33,2262	0/0:18,0:17:27.09:0,27,2156	0/0:24,0:28:30.10:0,30,2068	1/1:11,13:23:21.07:950,21,0	0/1:14,1:16:60.70:318,0,61	0/0:19,0:22:27.08:0,27,952	0/0:5,0:8:24.08:0,24,562
chr10	43410855	.	T	TAATA	15987.45	PASS	AB=0.641;AC=35;AF=0.648;AN=54;BaseQRankSum=12.015;DP=495;FS=10.018;HRun=0;HaplotypeScore=143.5627;InbreedingCoeff=0.9050;MQ=55.45;MQ0=0;MQRankSum=-12.469;QD=48.45;ReadPosRankSum=-3.397;VQSLOD=4.6402;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,20:29:72.19:1650,72,0	1/1:5,3:8:15.05:280,15,0	0/0:18,0:12:16.36:0,16,256	0/0:12,0:11:5.65:0,6,169	1/1:8,6:14:21.07:415,21,0	1/1:5,16:19:45.15:1027,45,0	1/1:4,11:16:33.11:793,33,0	1/1:7,6:13:18.06:410,18,0	1/1:4,16:19:48.16:1103,48,0	1/1:7,12:19:42.14:1010,42,0	1/1:1,11:12:30.10:700,30,0	0/0:13,0:13:30.10:0,30,533	0/0:15,0:15:33.11:0,33,593	0/0:14,0:13:24.07:0,24,402	1/1:8,12:18:36.12:877,36,0	1/1:6,13:18:39.13:972,39,0	0/0:35,0:35:81.28:0,81,1444	0/1:11,14:25:2.73:1116,0,3	1/1:10,5:15:27.09:596,27,0	1/1:5,14:19:42.14:856,42,0	1/1:2,3:5:6.02:130,6,0	0/0:10,0:10:21.07:0,21,377	0/0:25,0:25:42.10:0,42,749	0/0:22,0:22:48.16:0,48,863	1/1:6,16:22:54.18:1166,54,0	1/1:10,18:29:69.19:1615,69,0	1/1:5,16:20:51.18:1271,51,0	./.
chr10	43410887	.	GGGAAGGAGGGAGGGAAGGAAGGAA	G	9794.56	PASS	AB=1.000;AC=26;AF=0.481;AN=54;BaseQRankSum=6.085;DP=446;FS=1.433;HRun=0;HaplotypeScore=306.3000;InbreedingCoeff=0.2440;MQ=57.63;MQ0=5;MQRankSum=-6.837;QD=31.70;ReadPosRankSum=2.648;VQSLOD=2.6460;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:17,4:21:48.52:1160,49,0	0/1:6,0:6:6.25:6,0,244	0/0:28,0:17:28.83:0,29,512	0/0:17,0:6:6:0,6,91	0/0:14,0:14:31.49:0,31,673	0/1:17,0:16:99:141,0,458	0/0:12,0:12:20.90:0,21,300	0/0:19,0:16:37.36:0,37,805	0/1:19,0:19:99:390,0,554	1/1:8,2:10:30.06:860,30,0	1/1:9,1:10:20.90:431,21,0	0/1:12,0:12:99:164,0,372	0/1:17,0:17:99:231,0,303	0/1:12,0:11:99:302,0,116	1/1:6,4:9:24.08:903,24,0	1/1:8,3:10:24.04:453,24,0	0/1:30,0:30:56.26:56,0,4267	1/1:16,2:18:20.79:1075,21,0	0/0:10,0:7:21.07:0,21,713	0/0:17,0:17:42.14:0,42,1393	0/0:5,0:4:7.64:0,8,54	0/1:16,0:16:99:275,0,100	0/1:25,0:25:23.14:23,0,763	0/1:31,0:32:52.53:53,0,371	1/1:11,5:16:48.02:1498,48,0	1/1:23,4:27:72.23:1773,72,0	0/0:13,0:13:27.09:0,27,934	./.
chr10	43410899	.	GGGAAGGAAGGAAGGAAGGAA	G	8419.41	PASS	AB=0.900;AC=38;AF=0.704;AN=54;BaseQRankSum=6.326;DP=415;FS=7.033;HRun=0;HaplotypeScore=236.1695;InbreedingCoeff=0.5507;MQ=49.03;MQ0=12;MQRankSum=-5.138;QD=27.25;ReadPosRankSum=2.360;VQSLOD=2.9964;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:17:11.90:457,12,0	1/1:6,0:6:3.01:120,3,0	./.	0/0:14,0:4:0:0,0,0	0/1:9,0:12:68.93:190,0,69	1/1:12,2:12:9.03:460,9,0	1/1:8,0:8:3.01:66,3,0	0/0:18,0:12:8.99:0,9,148	1/1:10,7:17:21.07:1101,21,0	1/1:9,0:9:9.03:380,9,0	1/1:7,0:7:3.90:124,4,0	1/1:8,7:15:9.92:484,10,0	1/1:8,9:17:12.04:642,12,0	1/1:3,9:11:16.82:806,17,0	1/1:9,0:8:12.04:454,12,0	1/1:9,0:8:3.01:119,3,0	0/1:32,0:31:50.31:50,0,3536	1/1:14,0:14:15.05:531,15,0	0/0:15,0:9:18.03:0,18,383	0/0:14,0:17:36.05:0,36,740	0/0:7,0:6:14.87:0,15,238	1/1:2,12:14:18.06:808,18,0	1/1:11,12:23:0.88:157,1,0	1/1:14,20:32:8.74:185,9,0	1/1:16,0:16:8.93:672,9,0	1/1:24,0:24:16.60:615,17,0	0/0:9,0:10:21.04:0,21,506	0/0:2,0:2:6.02:0,6,152
chr10	43413327	.	TCC	T	2384.69	PASS	AB=1.000;AC=42;AF=0.808;AN=52;BaseQRankSum=-3.060;DP=368;FS=9.510;HRun=3;HaplotypeScore=56.2271;InbreedingCoeff=0.2847;MQ=45.70;MQ0=33;MQRankSum=2.213;QD=8.49;ReadPosRankSum=3.789;VQSLOD=-0.0952;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:17:1.62:104,2,0	1/1:3,0:3:5.90:37,6,0	0/0:15,0:3:3:0,3,25	0/0:27,0:7:3.84:0,4,32	1/1:12,0:10:5.95:44,6,0	1/1:8,0:6:2.28:37,2,0	1/1:19,0:17:4.51:86,5,0	1/1:12,0:10:28.06:199,28,0	1/1:10,0:10:9.22:82,9,0	1/1:16,0:16:12.35:186,12,0	./.	1/1:15,0:15:33.01:246,33,0	0/1:13,0:12:6.15:60,0,6	1/1:6,0:5:6.44:47,6,0	0/1:7,0:7:6:25,0,6	0/1:11,0:11:20.41:83,0,20	0/0:23,0:21:13.94:0,14,184	1/1:9,0:9:24.65:155,25,0	1/1:6,0:6:14.90:110,15,0	1/1:11,0:9:8.96:71,9,0	1/1:13,0:12:14.81:139,15,0	1/1:18,0:18:7.82:75,8,0	1/1:9,0:8:5.90:48,6,0	1/1:25,0:24:35.67:294,36,0	./.	0/1:16,0:14:0.14:103,0,0	1/1:12,0:10:19.87:149,20,0	1/1:12,0:6:17.90:139,18,0
chr10	43415571	.	TA	T	1157.26	PASS	AB=0.940;AC=18;AF=0.321;AN=56;BaseQRankSum=4.177;DP=433;FS=6.414;HRun=9;HaplotypeScore=65.4258;InbreedingCoeff=0.6289;MQ=38.97;MQ0=57;MQRankSum=-3.754;QD=8.21;ReadPosRankSum=1.027;VQSLOD=1.4866;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,11:19:23.03:194,23,0	0/0:6,0:6:3.01:0,3,35	0/0:38,0:1:3.01:0,3,30	0/0:49,0:4:5.99:0,6,51	0/0:21,0:20:26.99:0,27,264	0/0:9,0:8:6.02:0,6,69	0/1:11,1:12:17.58:18,0,46	0/0:22,0:22:39.12:0,39,448	0/0:14,0:14:19.16:0,19,191	1/1:6,10:15:30:275,30,0	1/1:4,4:8:6:55,6,0	0/0:13,0:10:16.29:0,16,176	0/0:8,0:8:9.03:0,9,104	0/0:4,0:4:9.03:0,9,104	1/1:7,8:15:18:165,18,0	1/1:4,5:8:5.99:55,6,0	0/0:14,0:14:21.95:0,22,244	1/1:6,3:8:5.83:55,6,0	0/0:8,0:6:14.94:0,15,154	0/0:10,0:9:12.02:0,12,128	0/0:8,0:7:3.01:0,3,35	0/0:15,0:15:21.04:0,21,229	0/0:13,0:13:9.03:0,9,101	0/1:21,1:16:12.41:12,0,123	1/1:3,14:17:30:272,30,0	1/1:1,10:11:7.70:245,8,0	0/0:24,0:23:39.12:0,39,450	0/0:15,0:11:9.98:0,10,58
chr10	43416824	.	C	CAA	6169.41	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=2.458;DP=638;FS=5.340;HRun=10;HaplotypeScore=86.3575;InbreedingCoeff=0.9733;MQ=72.46;MQ0=0;MQRankSum=-2.320;QD=16.58;ReadPosRankSum=-0.632;VQSLOD=3.5088;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,15:18:27.08:387,27,0	0/0:6,0:6:14.81:0,15,128	0/0:25,0:21:29.35:0,29,296	0/0:10,0:10:14.10:0,14,94	1/1:11,0:36:54.56:283,55,0	0/0:24,0:24:51.01:0,51,512	0/0:27,0:27:66.07:0,66,658	1/1:3,1:26:6.56:196,7,0	0/0:15,0:16:41.82:0,42,408	1/1:6,16:24:49.34:640,49,0	1/1:2,14:17:42.10:583,42,0	0/0:28,0:28:65.57:0,66,634	0/0:17,0:17:45.09:0,45,456	0/0:14,0:14:27.02:0,27,275	1/1:6,22:31:50.66:718,51,0	1/1:7,23:30:26.67:775,27,0	0/0:22,0:22:54.04:0,54,526	1/1:2,22:25:56.68:809,57,0	1/1:3,0:19:39.60:149,40,0	1/1:6,0:30:34.03:242,34,0	1/1:2,0:24:43.08:162,43,0	0/0:26,0:27:71.86:0,72,706	0/0:15,0:15:39.03:0,39,382	0/0:28,0:32:70.78:0,71,672	1/1:2,9:13:12.03:145,12,0	1/1:4,18:28:65.59:807,66,0	1/1:10,0:27:26.16:161,26,0	1/1:6,0:22:12.62:113,13,0
chr10	43417076	.	G	GC	4753.55	PASS	AB=0.612;AC=48;AF=0.857;AN=56;BaseQRankSum=-1.661;DP=460;FS=19.709;HRun=9;HaplotypeScore=80.0654;InbreedingCoeff=0.5775;MQ=77.36;MQ0=1;MQRankSum=-3.600;QD=12.51;ReadPosRankSum=-0.431;VQSLOD=2.6579;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:14,16:30:39.54:419,40,0	0/1:3,6:10:25.20:186,0,25	0/0:24,0:23:31.85:0,32,261	0/0:23,0:20:28.85:0,29,219	1/1:2,0:5:5.81:34,6,0	1/1:3,17:21:41.95:446,42,0	1/1:8,14:23:32.92:346,33,0	1/1:7,2:17:20.22:137,20,0	1/1:2,12:14:24.06:265,24,0	1/1:9,1:17:23.48:138,23,0	1/1:2,0:8:17.08:86,17,0	1/1:3,1:12:11.49:62,11,0	1/1:3,0:10:5.68:28,6,0	1/1:4,1:9:5.68:29,6,0	1/1:8,0:22:25.57:128,26,0	1/1:4,10:15:33.09:363,33,0	0/0:31,1:32:53.86:0,54,696	1/1:1,0:16:25.19:131,25,0	0/1:6,7:14:2.04:188,0,2	1/1:2,9:11:3.40:192,3,0	1/1:5,11:16:30.08:332,30,0	1/1:5,1:11:11.36:92,11,0	1/1:4,1:10:5.85:48,6,0	1/1:8,0:23:19.89:99,20,0	1/1:7,0:11:5.81:34,6,0	1/1:6,2:13:9.38:85,9,0	1/1:6,17:23:45.10:486,45,0	1/1:5,14:19:36.10:398,36,0
chr10	43417628	.	AT	A	4354.12	PASS	AB=0.767;AC=34;AF=0.607;AN=56;BaseQRankSum=-7.169;DP=503;FS=13.574;HRun=11;HaplotypeScore=61.6435;InbreedingCoeff=0.8460;MQ=65.91;MQ0=4;MQRankSum=0.352;QD=14.56;ReadPosRankSum=1.958;VQSLOD=4.0405;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:37:80.08:0,80,420	1/1:1,3:4:5.98:49,6,0	0/0:9,0:6:6.74:0,7,43	0/1:16,0:10:2.44:2,0,55	1/1:5,14:19:32.92:270,33,0	1/1:3,14:17:31.14:268,31,0	1/1:4,14:18:35.95:296,36,0	1/1:13,19:31:53.85:437,54,0	1/1:4,12:16:26.96:222,27,0	0/0:4,0:17:36.79:0,37,182	0/0:2,0:11:26.15:0,26,162	1/1:2,12:14:32.96:271,33,0	0/1:1,7:8:11:127,0,11	1/1:1,9:9:17.97:148,18,0	0/0:9,0:18:19.68:0,20,113	0/0:2,0:17:22.79:0,23,114	0/0:39,0:38:93.13:0,93,966	0/0:6,0:27:37.83:0,38,237	1/1:6,15:21:11.75:290,12,0	1/1:1,8:9:17.97:148,18,0	1/1:5,23:28:50.91:419,51,0	1/1:1,8:9:23.96:197,24,0	1/1:1,12:13:32.96:271,33,0	1/1:3,21:22:50.94:419,51,0	0/0:6,0:12:23.63:0,24,146	0/0:3,0:14:35.91:0,36,203	1/1:3,18:22:40.72:326,41,0	1/1:5,14:18:23.97:197,24,0
chr10	43419000	.	AT	A	6221.56	PASS	AB=0.933;AC=29;AF=0.518;AN=56;BaseQRankSum=1.902;DP=582;FS=11.314;HRun=11;HaplotypeScore=67.4129;InbreedingCoeff=0.9077;MQ=67.73;MQ0=0;MQRankSum=-2.244;QD=18.09;ReadPosRankSum=0.525;VQSLOD=5.2327;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,1:25:34.21:0,34,520	0/0:2,0:14:31.41:0,31,162	0/1:13,1:12:7.67:8,0,149	0/0:9,1:10:2.17:0,2,90	1/1:4,23:27:30.91:461,31,0	0/0:1,0:25:62.78:0,63,319	0/0:2,0:11:23.06:0,23,133	1/1:8,23:32:70.90:566,71,0	0/0:1,0:13:34.16:0,34,171	1/1:5,23:28:64.15:539,64,0	1/1:1,18:19:50.91:419,51,0	0/0:14,0:14:42.09:0,42,440	0/0:25,0:25:60.13:0,60,627	0/0:14,0:14:36.09:0,36,383	1/1:3,20:23:56.92:468,57,0	1/1:2,12:14:26.97:222,27,0	0/0:21,0:21:57.12:0,57,599	1/1:4,19:23:46.11:391,46,0	1/1:6,14:20:41.65:344,42,0	1/1:10,20:30:59.85:492,60,0	1/1:1,16:17:12.97:313,13,0	0/0:25,1:26:32.48:0,32,538	0/0:16,0:17:38.92:0,39,392	0/0:23,0:23:60.15:0,60,639	1/1:1,21:22:59.92:493,60,0	1/1:2,24:26:68.90:566,69,0	1/1:6,32:38:83.89:689,84,0	1/1:0,10:11:32:252,32,0
chr10	43419430	.	G	GCA	5660.24	PASS	AB=0.561;AC=11;AF=0.196;AN=56;BaseQRankSum=-13.018;DP=745;FS=3.897;HRun=0;HaplotypeScore=90.1487;InbreedingCoeff=0.8782;MQ=65.98;MQ0=1;MQRankSum=-1.148;QD=34.51;ReadPosRankSum=3.650;VQSLOD=7.4372;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:58:99:0,141,1764	0/0:16,0:16:45.12:0,45,557	0/0:41,0:37:81.23:0,81,1000	0/0:37,0:33:61.42:0,61,879	0/0:26,0:26:72.20:0,72,888	0/0:22,0:22:60.19:0,60,764	0/0:30,0:30:72.23:0,72,917	0/0:31,0:31:75.24:0,75,955	0/0:9,0:9:24.08:0,24,305	0/0:27,0:27:66.21:0,66,841	0/0:30,0:31:75.07:0,75,931	1/1:9,15:23:10.85:714,11,0	1/1:2,14:16:38.91:652,39,0	1/1:4,27:31:75.26:1255,75,0	0/0:19,0:19:48.15:0,48,611	0/0:25,0:25:66.21:0,66,840	0/0:38,1:39:55.29:0,55,1247	0/0:19,0:19:48.10:0,48,579	0/0:21,0:21:54.16:0,54,672	0/0:22,0:22:54.16:0,54,674	0/0:55,0:55:99:0,120,1766	0/1:5,18:23:19.19:796,0,19	1/1:6,21:28:60.21:1001,60,0	1/1:6,36:42:75.26:1242,75,0	0/0:12,0:12:24.08:0,24,305	0/0:15,0:15:36.10:0,36,446	0/0:15,0:15:42.13:0,42,534	0/0:11,0:11:33.11:0,33,420
chr10	43420374	.	TA	T	2707.07	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=11.041;DP=528;FS=2.479;HRun=7;HaplotypeScore=51.3908;InbreedingCoeff=0.9737;MQ=72.90;MQ0=1;MQRankSum=-1.062;QD=25.07;ReadPosRankSum=3.199;VQSLOD=4.2314;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:57.18:0,57,713	0/0:6,0:6:15.03:0,15,165	0/0:16,0:14:26.30:0,26,309	0/0:9,0:9:17.88:0,18,189	0/0:23,0:23:66.21:0,66,830	0/0:26,0:26:75.23:0,75,930	0/0:15,0:15:42.12:0,42,514	0/0:24,0:24:63.19:0,63,781	0/0:27,0:27:78.25:0,78,981	0/0:25,0:25:72.23:0,72,903	0/0:18,0:18:51.12:0,51,624	1/1:2,24:26:66.11:662,66,0	1/1:2,12:14:39.08:396,39,0	1/1:0,14:14:39.05:398,39,0	0/0:27,0:27:72.23:0,72,906	0/0:18,0:18:51.16:0,51,641	0/0:15,0:15:45.14:0,45,566	0/0:15,0:15:39.09:0,39,474	0/0:20,0:20:48.14:0,48,592	0/0:21,0:21:60.19:0,60,755	0/0:4,0:4:6.02:0,6,75	1/1:0,12:12:27.06:275,27,0	1/1:1,27:28:81.18:826,81,0	1/1:2,12:14:33.07:337,33,0	0/0:23,0:23:66.21:0,66,830	0/0:25,0:25:75.20:0,75,926	0/0:28,0:28:81.22:0,81,981	0/0:14,0:14:42.12:0,42,514
chr10	43420452	.	TA	T	2501.42	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=4.291;DP=494;FS=3.511;HRun=12;HaplotypeScore=59.7483;InbreedingCoeff=0.9445;MQ=68.40;MQ0=2;MQRankSum=0.534;QD=15.44;ReadPosRankSum=4.278;VQSLOD=4.6269;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:58.57:0,59,553	1/1:2,2:4:5.97:46,6,0	0/0:15,0:11:19.51:0,20,162	0/0:15,0:12:17.55:0,18,142	0/0:18,1:19:21.86:0,22,403	1/1:3,13:16:41.72:317,42,0	1/1:1,9:10:0.83:139,1,0	0/0:26,0:27:65.94:0,66,629	1/1:1,13:14:29.87:232,30,0	1/1:9,11:20:44.78:344,45,0	1/1:1,19:20:50.79:395,51,0	0/0:14,0:16:35.73:0,36,327	0/0:14,0:14:27.05:0,27,273	0/0:16,1:17:21.83:0,22,390	1/1:3,9:12:20.50:162,21,0	1/1:0,12:12:32.87:255,33,0	0/0:15,2:17:23.95:0,24,398	1/1:2,17:19:44.79:348,45,0	0/0:30,0:30:78.15:0,78,786	0/0:28,1:29:52:0,52,695	0/0:11,1:12:17.92:0,18,161	0/0:21,0:21:53.92:0,54,519	0/0:20,0:20:39.07:0,39,389	0/0:12,0:13:32.86:0,33,309	1/1:5,13:19:37.86:285,38,0	1/1:5,11:16:26.46:196,26,0	0/0:26,1:27:48.80:0,49,649	0/0:15,0:15:27.04:0,27,268
chr10	43420610	.	CT	C	3442.40	PASS	AB=0.937;AC=40;AF=0.714;AN=56;BaseQRankSum=-1.669;DP=500;FS=4.339;HRun=13;HaplotypeScore=73.3453;InbreedingCoeff=0.6464;MQ=72.36;MQ0=0;MQRankSum=-2.001;QD=9.62;ReadPosRankSum=6.450;VQSLOD=3.0625;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,12:20:3.56:190,4,0	1/1:3,8:11:23.85:175,24,0	0/1:10,0:10:10.45:10,0,57	0/1:10,0:9:8.93:9,0,48	0/0:5,0:19:41.50:0,42,223	1/1:2,13:17:39.86:274,40,0	1/1:2,10:14:20.99:127,21,0	0/0:15,1:33:40.36:0,40,352	1/1:2,11:15:10.67:223,11,0	1/1:6,16:23:50.97:359,51,0	1/1:1,10:11:20.42:153,20,0	1/1:4,0:19:30.32:88,30,0	1/1:2,0:12:18.32:53,18,0	1/1:2,0:15:20.36:59,20,0	1/1:4,13:19:42.81:296,43,0	1/1:4,14:18:15.55:277,16,0	0/1:21,5:26:39.56:40,0,294	1/1:3,15:19:43.78:312,44,0	0/0:13,0:22:44.75:0,45,278	0/0:4,0:19:40.63:0,41,244	0/1:6,1:10:4.43:4,0,69	1/1:3,0:14:20.35:59,20,0	1/1:5,0:24:37.60:122,38,0	1/1:1,0:17:28.51:82,29,0	1/1:1,16:19:45.83:318,46,0	1/1:3,12:15:6.67:212,7,0	0/0:13,0:29:39.07:0,39,219	0/0:5,1:19:18.31:0,18,184
chr10	43421442	.	AAAG	A	2635.95	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=9.390;DP=451;FS=0.539;HRun=0;HaplotypeScore=66.4252;InbreedingCoeff=0.9826;MQ=80.23;MQ0=0;MQRankSum=-2.784;QD=42.52;ReadPosRankSum=1.169;VQSLOD=4.4436;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,138,3328	0/0:6,0:6:18.06:0,18,443	0/0:19,0:19:57.02:0,57,1256	0/0:11,0:11:18.30:0,18,384	0/0:16,0:16:48.15:0,48,1132	0/0:16,0:16:48.15:0,48,1116	0/0:28,0:28:84.27:0,84,2004	0/0:18,0:18:54.19:0,54,1268	0/0:14,0:14:42.14:0,42,1035	0/0:14,0:14:42.10:0,42,892	0/0:9,0:9:27.09:0,27,599	1/1:0,10:10:26.73:502,27,0	1/1:0,9:9:21.07:390,21,0	1/1:0,8:9:27.09:484,27,0	0/0:8,0:8:24.08:0,24,569	0/0:17,0:17:51.16:0,51,1163	0/0:41,0:41:99:0,123,2958	0/0:25,0:25:75.24:0,75,1786	0/0:19,0:19:57.16:0,57,1266	0/0:9,0:9:27.06:0,27,521	0/0:38,0:38:99:0,111,2585	1/1:1,4:5:12.04:204,12,0	1/1:1,7:8:21.07:384,21,0	1/1:0,21:21:48.16:857,48,0	0/0:9,0:9:27.09:0,27,657	0/0:15,0:15:45.15:0,45,1090	0/0:5,0:5:15.04:0,15,300	0/0:6,0:6:18.06:0,18,415
chr10	43426267	.	AACACACACACACACACACACACACAC	A	1111.41	PASS	AB=1.000;AC=13;AF=0.260;AN=50;BaseQRankSum=3.996;DP=427;FS=23.178;HRun=0;HaplotypeScore=248.1869;InbreedingCoeff=0.6532;MQ=67.57;MQ0=21;MQRankSum=-3.502;QD=14.43;ReadPosRankSum=-0.568;VQSLOD=1.0386;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:28:33.08:0,33,1428	./.	./.	0/0:34,0:18:0.47:0,0,1	0/0:9,0:8:9.03:0,9,384	0/0:9,0:11:9.03:0,9,523	0/0:17,0:17:13.17:0,13,1235	0/0:23,0:22:27.06:0,27,553	0/0:13,0:13:20.86:0,21,1374	0/0:10,0:11:15.05:0,15,706	0/0:13,0:13:21.07:0,21,935	1/1:6,3:10:6.02:382,6,0	1/1:11,1:12:3.01:201,3,0	./.	0/0:7,0:8:6.02:0,6,190	0/0:14,0:18:27.08:0,27,930	0/0:15,0:20:36.12:0,36,2011	0/0:25,0:24:29.89:0,30,1250	0/0:16,0:15:23.29:0,23,441	0/1:7,0:7:0:0,0,0	0/0:19,0:19:12.04:0,12,256	1/1:9,2:11:6.02:354,6,0	1/1:5,2:6:3.01:201,3,0	1/1:24,0:24:3.01:49,3,0	0/0:14,0:14:24.08:0,24,1374	0/0:13,0:11:12.04:0,12,446	0/0:13,0:13:3.01:0,3,76	1/1:4,0:6:3.01:61,3,0
chr10	43428758	.	T	TTTTA	1335.32	PASS	AB=1.000;AC=24;AF=0.480;AN=50;BaseQRankSum=-4.545;DP=271;FS=0.868;HRun=0;HaplotypeScore=43.4705;InbreedingCoeff=0.5519;MQ=75.29;MQ0=0;MQRankSum=-0.138;QD=13.09;ReadPosRankSum=-1.413;VQSLOD=2.5086;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:11,0:11:62.29:62,0,81	1/1:4,0:4:3.01:71,3,0	./.	./.	0/0:5,0:11:15.02:0,15,140	1/1:7,9:15:18.06:426,18,0	1/1:3,1:4:3.01:71,3,0	0/0:29,0:29:27.07:0,27,363	1/1:2,1:3:3.01:71,3,0	0/0:7,0:7:12.03:0,12,168	0/0:8,0:8:12.03:0,12,168	1/1:5,2:7:6.02:142,6,0	1/1:1,1:2:3.01:71,3,0	1/1:4,1:5:3.01:71,3,0	1/1:3,3:6:9.03:213,9,0	1/1:3,0:3:3.01:53,3,0	0/0:31,0:31:48.16:0,48,744	0/1:29,0:29:9.34:9,0,656	0/0:16,0:16:18.06:0,18,282	0/0:4,0:4:9.03:0,9,141	0/0:5,0:5:5.99:0,6,68	./.	1/1:5,1:6:3.01:71,3,0	1/1:3,3:6:9.03:176,9,0	0/0:7,0:7:9.03:0,9,141	0/0:12,0:12:12.04:0,12,188	0/0:12,0:12:24.08:0,24,373	0/0:10,0:10:6.02:0,6,94
chr10	43428981	.	TA	T	852.14	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=3.051;DP=379;FS=0.000;HRun=6;HaplotypeScore=53.6321;InbreedingCoeff=0.8584;MQ=63.89;MQ0=0;MQRankSum=1.074;QD=21.85;ReadPosRankSum=1.601;VQSLOD=2.7989;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:72.16:0,72,861	1/1:0,3:3:6.01:64,6,0	0/0:4,0:4:1.25:0,1,3	0/0:5,0:5:2.10:0,2,27	0/0:17,0:17:36.08:0,36,420	1/1:0,9:10:29.11:296,29,0	1/1:1,10:11:21.05:225,21,0	0/0:36,0:36:99:0,99,1212	1/1:0,15:15:39.10:419,39,0	0/0:11,0:11:30.09:0,30,379	0/0:11,0:11:33.09:0,33,415	0/0:9,0:9:24.08:0,24,312	0/0:16,0:16:48.14:0,48,609	0/0:8,0:8:24.08:0,24,310	0/0:10,0:10:30.09:0,30,377	0/0:20,0:20:57.17:0,57,726	0/0:32,0:32:84.25:0,84,1073	0/0:21,0:21:52.89:0,53,664	0/0:18,0:18:51.16:0,51,644	0/0:11,0:11:33:0,33,370	0/0:5,0:5:15.05:0,15,191	0/0:3,0:3:9.03:0,9,117	0/0:7,0:7:21.06:0,21,260	0/0:7,0:7:21.05:0,21,258	0/0:14,0:13:41.98:0,42,475	0/0:18,0:18:54.18:0,54,702	0/0:17,0:17:51.14:0,51,635	0/0:10,0:10:30.06:0,30,365
chr10	43429270	.	TAC	T	2845.48	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=4.830;DP=508;FS=0.000;HRun=0;HaplotypeScore=122.7152;InbreedingCoeff=0.8786;MQ=65.41;MQ0=4;MQRankSum=-2.350;QD=11.91;ReadPosRankSum=-0.023;VQSLOD=3.3853;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:15,5:20:13.28:147,13,0	0/0:6,0:9:5.03:0,5,36	0/0:28,0:22:36.78:0,37,404	0/0:28,0:21:24.13:0,24,378	0/0:19,0:19:26.92:0,27,366	0/0:6,0:12:7.36:0,7,56	0/0:9,0:19:9.02:0,9,123	0/0:22,0:22:56.68:0,57,654	0/0:18,0:18:21.84:0,22,151	1/1:7,13:19:39.11:450,39,0	1/1:10,8:18:17.53:211,18,0	1/1:5,17:22:8.88:87,9,0	1/1:2,6:8:15.03:166,15,0	1/1:0,15:15:12:110,12,0	1/1:3,11:14:12.48:123,12,0	1/1:10,6:16:36.05:393,36,0	0/0:19,0:19:33.37:0,33,495	1/1:5,5:10:2.43:34,2,0	0/0:18,0:18:18.04:0,18,225	0/0:18,0:18:29.31:0,29,413	0/0:17,0:16:20:0,20,207	1/1:11,11:22:26.98:285,27,0	1/1:7,5:11:14.53:147,15,0	1/1:3,14:17:5.98:55,6,0	1/1:3,13:16:18.02:179,18,0	1/1:22,7:29:18.26:675,18,0	0/0:32,0:32:27.09:0,27,401	0/0:9,0:9:6:0,6,65
chr10	43429290	.	TACACACAC	T	30.02	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=1.853;DP=474;FS=4.107;HRun=0;HaplotypeScore=172.7595;InbreedingCoeff=0.0364;MQ=48.91;MQ0=11;MQRankSum=0.822;QD=0.33;ReadPosRankSum=-1.591;VQSLOD=2.5728;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:24:1.88:2,0,74	0/0:8,0:7:3.01:0,3,102	0/0:21,0:15:13.07:0,13,205	0/0:25,0:14:10.37:0,10,214	0/0:15,0:15:11.99:0,12,186	0/1:13,0:13:13.54:14,0,236	0/0:10,0:10:9.03:0,9,316	0/0:30,0:27:49.44:0,49,895	0/0:16,0:15:21.17:0,21,535	0/1:21,0:18:4.25:4,0,379	0/0:16,0:15:0.82:0,1,179	0/0:18,1:19:9.99:0,10,61	0/0:11,0:11:3.42:0,3,51	0/0:13,2:15:11.06:0,11,105	0/1:12,0:12:4.51:5,0,165	0/0:17,0:17:8.68:0,9,271	0/0:19,0:20:46.51:0,47,1335	0/0:8,0:7:6.47:0,6,100	0/1:10,0:7:5.45:5,0,212	0/0:18,0:18:12.01:0,12,218	0/0:15,0:14:9.53:0,10,147	0/0:20,1:21:14.74:0,15,135	1/1:9,1:10:6.02:103,6,0	0/0:20,0:21:3.01:0,3,36	0/0:15,0:15:19.92:0,20,237	0/0:28,0:26:5.26:0,5,507	0/0:25,0:25:11.80:0,12,312	0/0:7,0:7:3.01:0,3,94
chr10	43429302	.	C	CAGAGAGAGAG	2933.68	PASS	AB=1.000;AC=25;AF=0.446;AN=56;BaseQRankSum=7.940;DP=444;FS=19.587;HRun=0;HaplotypeScore=158.8969;InbreedingCoeff=0.2304;MQ=45.03;MQ0=17;MQRankSum=-4.764;QD=11.50;ReadPosRankSum=4.499;VQSLOD=1.2781;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:24:12.20:12,0,55	0/0:6,0:5:3.01:0,3,82	0/0:38,0:13:9.52:0,10,409	0/0:36,0:12:23.94:0,24,382	0/0:14,0:14:6.50:0,6,121	0/1:12,0:12:73.89:74,0,195	0/0:9,0:9:9.03:0,9,297	0/0:25,0:19:52.61:0,53,1007	0/0:12,0:11:21.17:0,21,510	0/1:18,0:15:99:365,0,268	0/1:15,0:14:0.79:132,0,1	1/1:15,0:15:8.89:192,9,0	1/1:9,0:9:10.64:248,11,0	1/1:14,0:14:10.29:310,10,0	1/1:10,0:10:13.61:146,14,0	0/1:15,0:15:73.94:116,0,74	0/0:19,0:19:46.51:0,47,1460	0/0:6,0:5:8.97:0,9,116	0/1:12,0:9:99:100,0,243	0/0:12,0:12:9.81:0,10,136	0/0:12,0:11:12.46:0,12,170	1/1:8,6:16:12.04:501,12,0	1/1:9,0:8:6.02:103,6,0	1/1:19,0:19:2.55:113,3,0	0/1:14,0:14:10.01:261,0,10	0/1:22,0:20:99:319,0,373	0/1:21,0:21:70.24:70,0,107	1/1:9,0:8:3.01:52,3,0
chr10	43429306	.	C	CAGAGAGAGAGAGAG	5714.08	PASS	AB=1.000;AC=37;AF=0.685;AN=54;BaseQRankSum=5.260;DP=413;FS=14.475;HRun=0;HaplotypeScore=156.9418;InbreedingCoeff=0.5350;MQ=48.73;MQ0=16;MQRankSum=-2.569;QD=22.50;ReadPosRankSum=4.758;VQSLOD=2.7690;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:7,12:22:6.01:72,6,0	1/1:6,0:5:2.21:10,2,0	0/0:43,0:14:29.74:0,30,664	0/0:37,0:14:21.76:0,22,448	0/0:13,0:13:2.99:0,3,24	0/1:12,0:12:87.82:121,0,88	0/0:9,0:9:9.03:0,9,162	0/0:23,0:17:20.85:0,21,141	0/0:10,0:9:16.59:0,17,206	1/1:17,0:15:39.04:865,39,0	1/1:9,0:12:12.04:292,12,0	1/1:12,0:12:5.88:178,6,0	1/1:7,0:7:12.02:260,12,0	1/1:12,0:12:12.01:268,12,0	1/1:7,0:9:15.05:324,15,0	1/1:12,0:13:21.05:413,21,0	0/0:18,0:18:46.07:0,46,1340	1/1:6,0:5:5.98:56,6,0	0/1:12,0:10:7.48:352,0,7	1/1:11,0:11:6.49:95,6,0	1/1:11,0:11:1.42:5,1,0	1/1:12,0:12:12.04:470,12,0	./.	1/1:18,0:18:3.01:101,3,0	1/1:13,0:14:17.79:465,18,0	1/1:16,0:15:45.07:947,45,0	0/1:19,0:19:14.49:253,0,14	1/1:9,0:8:3.01:166,3,0
chr10	43429308	.	C	CAGAGAGAGAGAGAG	6247.30	PASS	AB=0.816;AC=42;AF=0.778;AN=54;BaseQRankSum=2.469;DP=406;FS=12.213;HRun=0;HaplotypeScore=149.6738;InbreedingCoeff=0.6269;MQ=46.39;MQ0=16;MQRankSum=-3.419;QD=22.23;ReadPosRankSum=3.949;VQSLOD=3.2862;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:18:5.98:46,6,0	1/1:5,0:4:3.01:59,3,0	0/0:47,0:14:33.04:0,33,710	0/0:38,0:13:19.45:0,19,519	0/1:5,0:12:0:0,0,0	0/1:12,0:12:39.09:121,0,39	0/0:7,0:7:8.97:0,9,70	1/1:23,0:17:23.84:256,24,0	0/0:9,0:8:12.72:0,13,83	1/1:18,0:15:41.16:849,41,0	1/1:12,0:11:11.99:241,12,0	1/1:13,0:13:5.88:190,6,0	1/1:7,0:7:11.78:298,12,0	1/1:12,0:12:11.91:264,12,0	1/1:9,0:9:15:251,15,0	1/1:12,0:12:17.95:283,18,0	0/0:17,0:17:42.28:0,42,1145	1/1:5,0:5:5.86:35,6,0	1/1:12,0:10:29.99:594,30,0	1/1:10,0:10:6.99:143,7,0	1/1:10,0:10:11.37:258,11,0	1/1:12,0:12:12.04:473,12,0	./.	1/1:18,0:18:3.01:102,3,0	1/1:12,0:12:12.04:412,12,0	1/1:17,0:15:42.37:842,42,0	1/1:3,13:19:6.02:329,6,0	1/1:2,5:10:3.01:204,3,0
chr10	43429324	.	AGT	A	345.55	PASS	AB=0.947;AC=19;AF=0.339;AN=56;BaseQRankSum=3.523;DP=378;FS=28.917;HRun=0;HaplotypeScore=83.9193;InbreedingCoeff=-0.2834;MQ=47.93;MQ0=12;MQRankSum=-1.219;QD=1.58;ReadPosRankSum=0.386;VQSLOD=0.0593;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:4.91:0,5,37	0/1:3,0:2:13.83:14,0,16	0/0:62,0:19:36.13:0,36,379	0/1:42,0:13:29.37:29,0,158	0/1:13,0:12:25.47:66,0,25	0/1:8,0:8:0.87:1,0,13	0/0:8,0:6:4.94:0,5,57	0/1:16,3:18:15.87:16,0,364	0/0:4,0:4:11.36:0,11,73	0/1:12,0:11:7.37:7,0,168	0/1:7,0:7:10.60:21,0,11	0/1:10,0:10:3.51:21,0,4	0/0:11,0:11:0.09:0,0,40	0/1:10,0:9:9.23:9,0,93	0/1:5,1:5:2.16:2,0,19	0/0:12,0:12:13.05:0,13,171	0/0:11,0:13:24.24:0,24,295	0/0:4,0:5:2.37:0,2,8	0/1:14,8:20:85.93:86,0,304	0/1:5,6:11:13.21:96,0,13	1/1:2,0:2:5.93:45,6,0	0/1:13,0:12:6.87:27,0,7	0/0:6,0:5:8.35:0,8,45	0/1:6,0:6:1.64:2,0,12	0/1:8,0:8:5.24:5,0,56	0/0:20,0:19:14.13:0,14,328	0/1:11,0:11:16.25:16,0,31	0/1:16,0:15:26.27:26,0,76
chr10	43430094	.	CAGA	C	4115.13	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=11.997;DP=654;FS=0.429;HRun=0;HaplotypeScore=91.7568;InbreedingCoeff=0.9988;MQ=91.90;MQ0=0;MQRankSum=-1.709;QD=37.75;ReadPosRankSum=3.856;VQSLOD=4.0944;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,111,2409	0/0:8,0:8:24.08:0,24,543	0/0:32,0:32:83.10:0,83,1730	0/0:27,0:28:72.07:0,72,1379	0/0:26,0:26:72.23:0,72,1523	0/0:22,0:22:66.23:0,66,1495	0/0:31,0:31:93.32:0,93,2086	0/0:31,0:31:90.29:0,90,1960	0/0:29,0:29:81.26:0,81,1792	0/0:32,0:32:87.29:0,87,1894	0/0:17,0:17:51.12:0,51,1065	1/1:1,24:25:60.20:986,60,0	1/1:0,14:14:36.12:586,36,0	1/1:2,22:24:54.18:898,54,0	0/0:23,0:23:69.23:0,69,1522	0/0:15,0:15:45.15:0,45,1019	0/0:24,0:24:69.24:0,69,1541	0/0:22,0:22:60.18:0,60,1272	0/0:31,0:31:84.27:0,84,1861	0/0:16,0:16:48.15:0,48,1028	0/0:49,0:49:99:0,126,2758	1/1:0,11:11:24.08:399,24,0	1/1:0,12:12:29.97:498,30,0	1/1:1,22:23:45.15:748,45,0	0/0:16,0:16:48.13:0,48,925	0/0:24,0:24:69.23:0,69,1500	0/0:21,0:21:63.22:0,63,1418	0/0:9,0:9:27.09:0,27,604
chr10	43431861	.	TCTCTTCTGA	T	2695.27	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=7.623;DP=523;FS=6.907;HRun=0;HaplotypeScore=155.3318;InbreedingCoeff=0.9807;MQ=96.93;MQ0=1;MQRankSum=-9.024;QD=49.00;ReadPosRankSum=0.459;VQSLOD=2.6202;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:31:81.26:0,81,3515	1/1:3,4:7:9.03:261,9,0	0/0:27,0:26:56.78:0,57,1888	0/0:39,0:37:81.06:0,81,2618	0/0:23,0:23:60.21:0,60,2568	1/1:3,12:15:33.11:956,33,0	1/1:4,19:22:39.13:1111,39,0	0/0:26,0:26:57.19:0,57,2189	1/1:3,7:10:18.06:522,18,0	0/0:22,0:22:60.21:0,60,2610	0/0:16,0:16:39.13:0,39,1633	0/0:16,0:16:45.15:0,45,1917	0/0:13,0:13:36.12:0,36,1664	0/0:16,0:16:33.11:0,33,1416	0/0:13,0:13:30.10:0,30,1311	0/0:18,0:18:48.16:0,48,2132	0/0:19,0:19:54.17:0,54,2119	0/0:11,0:11:33.11:0,33,1350	0/0:17,0:17:33.10:0,33,943	0/0:17,0:17:42.14:0,42,1683	0/0:28,0:28:78.27:0,78,3359	0/0:17,0:17:42.14:0,42,1975	0/0:17,0:17:42.14:0,42,1898	0/0:20,0:20:57.20:0,57,2409	0/0:20,0:20:51.18:0,51,2365	0/0:16,0:16:42.14:0,42,1767	0/0:14,0:14:36.12:0,36,1655	0/0:12,0:12:36.12:0,36,1594
chr10	43431930	.	AACACACAC	A	466.18	PASS	AB=0.835;AC=13;AF=0.361;AN=36;BaseQRankSum=2.839;DP=376;FS=0.000;HRun=0;HaplotypeScore=111.6598;InbreedingCoeff=0.2768;MQ=58.31;MQ0=31;MQRankSum=-1.563;QD=4.44;ReadPosRankSum=2.164;VQSLOD=1.9510;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:26:6.02:0,6,142	0/0:3,0:3:2.99:0,3,24	./.	./.	0/0:12,0:12:9.03:0,9,278	1/1:10,2:11:6.02:136,6,0	0/1:20,2:18:12.31:12,0,85	./.	0/1:7,0:9:15.67:16,0,38	0/0:11,0:9:6.02:0,6,226	./.	./.	0/1:7,2:10:91.16:196,0,91	./.	0/0:4,0:4:3.01:0,3,61	0/0:17,0:17:3.48:0,3,105	0/0:23,0:23:18.63:0,19,552	0/0:13,0:11:9.03:0,9,293	1/1:9,0:9:3.01:56,3,0	./.	./.	./.	1/1:6,2:7:0.47:1,0,0	1/1:23,1:22:6.47:60,6,0	0/0:12,0:9:6.02:0,6,216	0/0:10,0:9:21.06:0,21,649	1/1:5,0:7:6.02:112,6,0	./.
chr10	43431984	.	CGAGAGAGA	C	274.97	PASS	AB=0.899;AC=7;AF=0.175;AN=40;BaseQRankSum=0.284;DP=398;FS=1.814;HRun=0;HaplotypeScore=101.9724;InbreedingCoeff=0.0838;MQ=30.66;MQ0=95;MQRankSum=-3.449;QD=3.06;ReadPosRankSum=1.664;VQSLOD=1.3861;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:20:12.04:0,12,320	0/0:3,0:3:0.89:0,1,2	./.	./.	./.	0/0:25,0:20:3.48:0,3,66	./.	./.	0/0:10,0:8:6:0,6,78	0/1:9,0:9:21.56:22,0,39	./.	0/0:10,0:9:3.01:0,3,123	0/1:11,1:9:23.87:68,0,24	0/0:19,0:17:9.03:0,9,244	./.	0/1:13,0:13:51.92:52,0,52	0/0:25,0:21:10.22:0,10,75	0/1:18,0:13:1.47:29,0,1	0/0:12,0:11:15.05:0,15,391	0/0:9,0:7:1.55:0,2,4	0/0:26,0:15:5.83:0,6,75	./.	0/0:12,0:6:6.02:0,6,126	0/0:24,0:12:12.04:0,12,314	0/0:14,0:9:0:0,0,0	1/1:16,1:15:9.03:202,9,0	0/1:12,0:9:15.39:15,0,58	0/0:11,0:4:3.01:0,3,57
chr10	43432074	.	CA	C	446.81	PASS	AC=6;AF=0.111;AN=54;BaseQRankSum=2.819;DP=295;FS=1.999;HRun=8;HaplotypeScore=38.0316;InbreedingCoeff=0.8488;MQ=90.87;MQ0=0;MQRankSum=0.106;QD=15.41;ReadPosRankSum=-0.922;VQSLOD=2.8280;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:36.04:0,36,416	1/1:2,0:2:2.99:23,3,0	0/0:14,0:14:39.01:0,39,443	0/0:20,0:20:42.02:0,42,455	0/0:13,0:13:36.11:0,36,435	./.	1/1:4,17:21:45.07:434,45,0	0/0:33,0:33:87.24:0,87,1021	1/1:2,4:6:12.02:116,12,0	0/0:7,0:7:15.05:0,15,181	0/0:13,0:13:36.11:0,36,435	0/0:18,0:18:48.15:0,48,580	0/0:5,0:5:15.03:0,15,170	0/0:6,0:6:18.06:0,18,217	0/0:5,0:5:9.03:0,9,109	0/0:8,0:8:24.07:0,24,290	0/0:7,0:7:21.06:0,21,254	0/0:7,0:7:17.99:0,18,199	0/0:16,0:16:39.11:0,39,461	0/0:9,0:9:24.07:0,24,290	0/0:12,0:12:27.08:0,27,326	0/0:10,0:10:27.08:0,27,326	0/0:9,0:9:24.07:0,24,290	0/0:6,0:6:12.04:0,12,145	0/0:6,0:6:18.04:0,18,206	0/0:12,0:12:30.09:0,30,362	0/0:11,0:11:27.08:0,27,326	0/0:3,0:3:9.03:0,9,107
chr10	43432557	.	GC	G	1452.98	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=5.116;DP=509;FS=2.369;HRun=8;HaplotypeScore=88.8515;InbreedingCoeff=0.9890;MQ=82.76;MQ0=0;MQRankSum=-2.042;QD=21.69;ReadPosRankSum=0.634;VQSLOD=3.9028;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:84.25:0,84,1004	1/1:1,6:7:18.03:174,18,0	0/0:11,1:13:13.90:0,14,249	0/0:18,0:19:35.26:0,35,324	0/0:10,0:10:24.06:0,24,277	1/1:3,17:20:45.02:425,45,0	1/1:3,21:24:63.10:608,63,0	0/0:17,0:18:38.99:0,39,450	1/1:1,15:16:42.06:406,42,0	0/0:16,0:16:48.14:0,48,572	0/0:15,0:15:39.09:0,39,438	0/0:21,0:21:57.17:0,57,688	0/0:17,0:17:42.11:0,42,494	0/0:25,0:25:75.22:0,75,894	0/0:15,0:15:42.13:0,42,507	0/0:21,1:22:37.21:0,37,721	0/0:23,0:23:69.20:0,69,823	0/0:18,0:17:45.14:0,45,542	0/0:22,0:22:48.15:0,48,579	0/0:7,0:7:21.02:0,21,227	0/0:33,0:33:90.17:0,90,1023	0/0:16,0:16:48.15:0,48,579	0/0:16,0:16:36.08:0,36,411	0/0:20,0:20:57.08:0,57,644	0/0:13,0:13:36.11:0,36,435	0/0:21,0:21:57.17:0,57,689	0/0:20,0:20:54.16:0,54,647	0/0:7,0:7:21.06:0,21,254
chr10	43433152	.	C	CCTCCCCTTTCTG	19931.20	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=9.516;DP=389;FS=1.268;HRun=0;HaplotypeScore=145.2471;InbreedingCoeff=0.9725;MQ=59.94;MQ0=2;MQRankSum=-15.207;QD=108.91;ReadPosRankSum=2.571;VQSLOD=5.2889;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:16:42.01:1274,42,0	0/0:7,0:7:18.05:0,18,503	0/0:8,0:8:24.08:0,24,720	0/0:8,0:8:19.31:0,19,585	0/0:18,0:18:48.14:0,48,1644	0/0:15,0:15:20.99:0,21,697	0/0:7,0:7:21.04:0,21,516	0/0:39,0:39:99:0,117,3613	0/0:6,0:6:8.99:0,9,181	1/1:24,0:24:72.23:2908,72,0	1/1:14,0:14:42.13:1869,42,0	1/1:14,1:15:39.05:1530,39,0	1/1:13,0:13:36.12:1566,36,0	1/1:10,0:10:30.03:1309,30,0	1/1:9,0:9:27.09:1134,27,0	1/1:10,0:10:30.10:1153,30,0	0/0:21,0:21:33.79:0,34,1792	1/1:8,0:8:21.07:831,21,0	0/0:15,0:14:42.14:0,42,1560	0/0:18,0:18:54.17:0,54,1848	0/0:8,0:8:24.07:0,24,785	1/1:9,0:9:21.02:684,21,0	1/1:10,1:10:26.98:1095,27,0	1/1:3,5:9:6.02:318,6,0	1/1:19,0:19:57.20:2304,57,0	1/1:16,0:16:45.15:1955,45,0	0/0:20,0:20:60.19:0,60,2048	0/0:16,0:16:48.16:0,48,1756
chr10	43433154	.	T	TCCC	6713.94	PASS	AB=0.649;AC=22;AF=0.393;AN=56;BaseQRankSum=13.166;DP=334;FS=2.625;HRun=2;HaplotypeScore=90.4438;InbreedingCoeff=0.5239;MQ=61.80;MQ0=3;MQRankSum=-12.038;QD=53.71;ReadPosRankSum=6.981;VQSLOD=4.8421;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:3,6:9:30.85:432,0,31	0/0:7,0:7:18.05:0,18,291	0/0:8,0:8:24.08:0,24,421	0/0:7,0:7:20.10:0,20,328	0/0:17,0:17:51.13:0,51,857	0/0:15,0:15:24.07:0,24,403	0/0:8,0:8:24.05:0,24,356	0/0:40,0:40:99:0,117,2029	0/0:6,0:6:9.03:0,9,144	1/1:2,15:17:51.16:1097,51,0	1/1:1,12:13:39.12:837,39,0	0/1:7,3:11:99:234,0,145	0/1:2,3:5:48.08:183,0,48	0/1:3,5:8:40.98:315,0,41	1/1:0,7:7:21.07:485,21,0	1/1:0,7:7:21.07:478,21,0	0/0:21,0:21:63.14:0,63,1078	1/1:1,3:5:15.05:317,15,0	0/0:16,0:14:42.14:0,42,783	0/0:18,0:18:54.19:0,54,1001	0/0:8,0:8:24.07:0,24,416	0/1:1,2:3:29.69:128,0,30	0/1:3,3:5:13.63:235,0,14	1/1:5,1:6:6.02:126,6,0	1/1:0,14:14:42.14:949,42,0	1/1:1,13:14:39.13:896,39,0	0/0:20,0:20:60.19:0,60,1086	0/0:18,0:18:48.16:0,48,894
chr10	43433157	.	T	TTCTGC	7144.79	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=13.480;DP=326;FS=3.299;HRun=0;HaplotypeScore=98.6979;InbreedingCoeff=0.9148;MQ=57.38;MQ0=3;MQRankSum=-13.435;QD=58.56;ReadPosRankSum=7.096;VQSLOD=5.0182;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,2:8:1.71:388,2,0	0/0:6,0:6:15:0,15,247	0/0:5,0:5:15.05:0,15,335	0/0:7,0:7:15.52:0,16,326	0/0:16,0:16:48.16:0,48,1069	0/0:18,0:18:24.03:0,24,440	0/0:8,0:8:17.85:0,18,288	0/0:37,0:37:99:0,108,2271	0/0:5,0:5:5.97:0,6,86	1/1:13,2:15:45.15:1002,45,0	1/1:8,4:12:36.12:801,36,0	1/1:9,2:12:27.09:555,27,0	1/1:3,2:5:15.05:368,15,0	1/1:4,4:8:21.07:553,21,0	1/1:7,0:7:21.07:443,21,0	1/1:7,0:7:21.07:342,21,0	0/0:22,0:22:66.21:0,66,1413	1/1:5,0:5:12.04:248,12,0	0/0:16,0:14:42.14:0,42,897	0/0:17,0:17:48.14:0,48,987	0/0:10,0:10:24.08:0,24,518	1/1:2,1:3:8.24:177,8,0	1/1:4,2:5:15.05:385,15,0	1/1:5,1:6:6.02:162,6,0	1/1:12,2:14:42.14:864,42,0	1/1:12,2:14:39.13:858,39,0	0/0:19,0:19:57.17:0,57,1208	0/0:18,0:18:54.19:0,54,1201
chr10	43433160	.	T	TG	3523.49	PASS	AB=0.849;AC=21;AF=0.375;AN=56;BaseQRankSum=12.212;DP=330;FS=5.069;HRun=0;HaplotypeScore=89.7808;InbreedingCoeff=0.4435;MQ=55.50;MQ0=3;MQRankSum=-11.777;QD=28.42;ReadPosRankSum=6.276;VQSLOD=3.7633;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:5,4:9:17.75:257,0,18	0/0:5,0:5:12.04:0,12,158	0/0:7,0:7:21.06:0,21,278	0/0:7,0:7:18.50:0,19,214	0/0:17,0:17:51.17:0,51,713	0/0:18,0:18:24.08:0,24,324	0/0:8,0:8:24.04:0,24,297	0/0:36,0:36:99:0,105,1438	0/0:5,0:5:6.02:0,6,72	1/1:2,13:15:45.14:632,45,0	1/1:4,8:12:36.12:486,36,0	0/1:11,1:12:28.22:28,0,129	0/1:4,1:5:27.83:28,0,63	0/1:7,1:8:58.88:59,0,64	1/1:0,7:7:21.07:296,21,0	1/1:0,7:7:21.07:301,21,0	0/0:23,0:23:69.23:0,69,963	1/1:1,4:5:12.03:175,12,0	0/0:17,0:15:42.13:0,42,570	0/0:14,0:14:42.14:0,42,587	0/0:9,0:9:27.09:0,27,377	0/1:2,1:3:29.63:70,0,30	0/1:5,1:5:35.02:50,0,35	0/1:7,0:7:22.03:27,0,22	1/1:2,12:14:42.14:581,42,0	1/1:3,11:14:39.13:534,39,0	0/0:21,0:21:63.17:0,63,842	0/0:19,0:19:57.19:0,57,796
chr10	43433176	.	TTTAC	T	2209.66	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=10.208;DP=376;FS=0.989;HRun=0;HaplotypeScore=120.3248;InbreedingCoeff=0.9174;MQ=51.60;MQ0=2;MQRankSum=-10.715;QD=12.48;ReadPosRankSum=2.490;VQSLOD=3.4080;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:19:43.44:271,43,0	0/0:1,0:5:6.02:0,6,92	0/0:6,0:6:15.03:0,15,151	0/0:8,0:7:15.04:0,15,161	0/0:14,0:14:36.04:0,36,617	0/0:3,0:19:15.02:0,15,189	0/0:7,0:7:20.94:0,21,307	0/0:37,0:37:84.08:0,84,1124	0/0:0,0:9:3.01:0,3,52	1/1:19,0:19:45.23:272,45,0	1/1:19,0:19:31.78:186,32,0	1/1:5,8:13:17.67:273,18,0	1/1:2,4:6:11.74:133,12,0	1/1:5,4:9:15.06:149,15,0	1/1:8,0:8:15.11:97,15,0	1/1:15,0:15:35.17:203,35,0	0/0:24,0:24:66.12:0,66,1345	1/1:10,0:10:27.93:165,28,0	0/0:14,0:12:28.81:0,29,382	0/0:14,0:14:36.04:0,36,626	0/0:9,0:9:24.03:0,24,448	1/1:4,0:4:3:25,3,0	1/1:3,6:9:14.26:107,14,0	1/1:8,0:8:23.68:179,24,0	1/1:17,0:17:28.04:115,28,0	1/1:21,0:21:45.89:255,46,0	0/0:16,0:16:36.03:0,36,700	0/0:17,0:17:42:0,42,745
chr10	43433368	.	C	CGATCT	4416.77	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-9.039;DP=600;FS=0.000;HRun=0;HaplotypeScore=105.6134;InbreedingCoeff=0.9827;MQ=74.89;MQ0=0;MQRankSum=-5.113;QD=76.15;ReadPosRankSum=1.933;VQSLOD=6.7951;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,120,2399	1/1:0,3:3:9.03:276,9,0	0/0:21,0:21:60.19:0,60,1163	0/0:29,0:28:71.72:0,72,1391	0/0:20,0:20:48.15:0,48,957	1/1:3,13:17:42.14:1271,42,0	1/1:3,11:14:36.11:1031,36,0	0/0:26,0:26:65.88:0,66,1232	1/1:2,21:24:60.21:1839,60,0	0/0:17,0:17:45.15:0,45,896	0/0:15,0:15:42.14:0,42,859	0/0:26,0:26:78.27:0,78,1591	0/0:19,0:19:54.19:0,54,1086	0/0:26,0:26:72.25:0,72,1490	0/0:28,0:28:75.26:0,75,1552	0/0:25,0:25:69.20:0,69,1373	0/0:34,0:34:96.32:0,96,1936	0/0:20,0:20:50.18:0,50,1071	0/0:25,0:25:69.23:0,69,1392	0/0:20,0:20:54.19:0,54,1118	0/0:25,0:25:69.22:0,69,1378	0/0:10,0:10:30.10:0,30,622	0/0:10,0:10:30.09:0,30,585	0/0:42,0:42:99:0,126,2573	0/0:14,0:14:42.14:0,42,870	0/0:20,0:20:57.20:0,57,1157	0/0:17,0:17:51.12:0,51,1012	0/0:8,0:8:24.08:0,24,497
chr10	43433652	.	AG	A	10574.96	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=11.094;DP=547;FS=11.070;HRun=1;HaplotypeScore=58.1179;InbreedingCoeff=0.9996;MQ=88.01;MQ0=0;MQRankSum=-6.379;QD=37.50;ReadPosRankSum=3.667;VQSLOD=4.5861;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,28:28:69.23:964,69,0	0/0:10,0:10:30.10:0,30,477	0/0:21,0:21:60.02:0,60,799	0/0:19,0:19:46.78:0,47,636	0/0:18,0:18:54.15:0,54,814	0/0:14,0:14:42.13:0,42,646	0/0:25,0:25:75.23:0,75,1149	0/0:11,0:11:33.09:0,33,482	0/0:14,0:14:42.10:0,42,617	1/1:0,19:19:57.14:741,57,0	1/1:0,27:27:68.93:861,69,0	1/1:0,18:18:48.16:671,48,0	1/1:0,20:20:60.20:838,60,0	1/1:0,15:15:42.14:587,42,0	1/1:0,20:20:48.16:671,48,0	1/1:0,17:17:51.17:713,51,0	0/0:36,0:36:99:0,108,1676	1/1:0,16:16:45.15:629,45,0	0/0:18,0:18:54.12:0,54,811	0/0:31,0:31:90.31:0,90,1435	0/0:11,0:11:33.11:0,33,527	1/1:0,14:14:39:498,39,0	1/1:0,21:21:54.18:754,54,0	1/1:0,16:16:45.15:629,45,0	1/1:0,21:21:57.19:796,57,0	1/1:0,30:30:90.28:1223,90,0	0/0:29,0:29:84.29:0,84,1336	0/0:8,0:8:24.08:0,24,383
chr10	43434280	.	AC	A	1255.09	PASS	AB=0.964;AC=17;AF=0.304;AN=56;BaseQRankSum=0.749;DP=388;FS=5.728;HRun=11;HaplotypeScore=46.8044;InbreedingCoeff=0.4903;MQ=63.57;MQ0=0;MQRankSum=0.232;QD=9.16;ReadPosRankSum=2.954;VQSLOD=1.9089;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:26:32.58:0,33,252	0/0:3,0:6:5.98:0,6,52	0/1:11,0:7:20.80:21,0,44	0/1:15,0:9:11.29:11,0,56	0/0:14,0:14:11.12:0,11,134	0/1:10,0:11:0.66:1,0,146	0/0:17,1:18:5.26:0,5,245	0/0:13,0:13:15.02:0,15,146	0/0:19,0:19:34.54:0,35,318	1/1:1,6:7:17.97:147,18,0	1/1:1,2:3:8.99:74,9,0	0/0:10,0:10:17.25:0,17,159	0/0:5,0:5:12.01:0,12,117	0/0:14,0:14:32.87:0,33,278	1/1:7,16:24:26.97:416,27,0	0/1:7,2:9:8.05:142,0,8	0/0:29,1:30:53.46:0,53,738	1/1:6,8:14:29.95:245,30,0	0/1:13,0:13:19.10:19,0,177	0/0:12,0:12:3.40:0,3,199	0/0:6,0:11:5.68:0,6,29	0/0:15,0:15:33.31:0,33,298	0/0:13,0:13:9.29:0,9,228	0/0:26,0:26:60.09:0,60,610	1/1:16,5:21:35.76:292,36,0	1/1:7,1:9:4.65:67,5,0	0/0:16,1:17:16.97:0,17,321	0/0:2,0:2:6.02:0,6,64
chr10	43434520	.	AT	A	3557.74	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=1.895;DP=579;FS=5.955;HRun=7;HaplotypeScore=67.2663;InbreedingCoeff=0.9966;MQ=73.03;MQ0=0;MQRankSum=-2.334;QD=27.16;ReadPosRankSum=-2.000;VQSLOD=3.6669;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:56:99:0,156,1934	0/0:11,0:11:30.10:0,30,377	0/0:27,0:26:63.53:0,64,764	0/0:18,0:17:33.06:0,33,416	1/1:0,18:18:54.12:550,54,0	0/0:24,0:24:69.21:0,69,854	0/0:17,0:17:45.10:0,45,548	1/1:4,24:28:72.07:699,72,0	0/0:20,0:20:60.18:0,60,742	0/0:23,0:23:66.21:0,66,830	0/0:20,0:20:51.16:0,51,634	0/0:17,0:17:48.14:0,48,590	0/0:8,0:8:24.02:0,24,271	0/0:17,0:17:51.16:0,51,641	0/0:18,0:18:51.15:0,51,629	0/0:19,0:19:54.17:0,54,679	0/0:25,0:25:54.15:0,54,663	0/0:26,0:26:63.20:0,63,790	1/1:0,15:15:45.10:454,45,0	1/1:1,15:16:45.06:448,45,0	1/1:2,20:22:54.12:551,54,0	0/0:17,0:17:45.14:0,45,563	0/0:21,0:21:54.17:0,54,677	0/0:26,0:26:72.15:0,72,860	0/0:23,0:23:63.17:0,63,775	0/0:15,0:15:45.10:0,45,536	1/1:1,24:25:69.16:703,69,0	1/1:0,7:7:15.03:153,15,0
chr10	43435976	.	AT	A	1356.03	PASS	AB=0.875;AC=27;AF=0.563;AN=48;BaseQRankSum=0.255;DP=138;FS=3.457;HRun=11;HaplotypeScore=25.8769;InbreedingCoeff=0.6002;MQ=53.90;MQ0=3;MQRankSum=-1.275;QD=17.16;ReadPosRankSum=1.486;VQSLOD=3.6836;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,20:20:52.97:425,53,0	./.	0/0:6,1:3:8.98:0,9,80	0/0:10,0:3:3.48:0,3,31	0/0:0,0:2:2.84:0,3,14	1/1:0,1:1:3:25,3,0	1/1:0,9:9:26.97:222,27,0	0/0:12,0:10:24.06:0,24,256	1/1:0,2:2:5.99:49,6,0	1/1:0,6:6:17.98:148,18,0	1/1:0,6:6:14.98:123,15,0	1/1:0,2:2:3:25,3,0	1/1:0,1:1:3:25,3,0	1/1:0,2:2:2.99:25,3,0	./.	./.	0/0:14,0:14:30.08:0,30,320	1/1:1,10:11:26.96:221,27,0	0/1:6,1:6:6.59:7,0,142	0/0:2,0:2:3.01:0,3,32	0/0:6,0:6:18.05:0,18,192	./.	1/1:0,3:3:8.99:74,9,0	1/1:0,3:4:8.03:55,8,0	0/0:1,1:2:0:0,0,0	1/1:0,4:4:11.99:98,12,0	0/0:3,0:3:6.02:0,6,64	0/0:1,0:1:3.01:0,3,32
chr10	43436077	.	G	GA	441.97	PASS	AB=1.000;AC=9;AF=0.167;AN=54;BaseQRankSum=-4.089;DP=242;FS=5.307;HRun=7;HaplotypeScore=26.1208;InbreedingCoeff=0.6358;MQ=68.96;MQ0=10;MQRankSum=2.254;QD=11.33;ReadPosRankSum=-0.373;VQSLOD=0.5483;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:22:62.08:0,62,597	1/1:0,2:2:6.02:72,6,0	0/0:15,0:5:4.77:0,5,48	0/1:17,0:5:5.63:6,0,6	0/0:6,0:6:15.01:0,15,139	1/1:1,4:5:12.04:145,12,0	1/1:1,10:9:21.06:254,21,0	0/0:23,0:19:57.07:0,57,541	1/1:0,4:4:9.03:109,9,0	0/0:3,0:3:9.01:0,9,87	0/0:7,0:7:21.03:0,21,199	0/0:3,0:3:5.59:0,6,57	0/0:7,0:7:18.03:0,18,173	0/0:5,0:5:12.01:0,12,116	0/0:1,0:1:3:0,3,29	0/0:3,0:3:6.01:0,6,58	0/0:30,0:29:72.04:0,72,673	0/0:15,0:15:36.06:0,36,347	0/0:15,0:11:24.02:0,24,227	0/0:4,0:4:9.01:0,9,87	0/0:5,0:5:6.01:0,6,58	./.	0/0:1,0:1:3:0,3,27	0/0:9,0:9:24.04:0,24,230	0/0:6,0:6:18.03:0,18,174	0/0:9,0:9:24.02:0,24,227	0/0:10,0:10:27.04:0,27,261	0/0:2,0:2:6.01:0,6,58
chr10	43436658	.	CAAAACGCCGTCAGAG	C	23718.75	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=10.183;DP=513;FS=5.565;HRun=0;HaplotypeScore=255.1451;InbreedingCoeff=0.8315;MQ=77.53;MQ0=0;MQRankSum=-10.716;QD=52.36;ReadPosRankSum=4.929;VQSLOD=3.9596;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:11,11:22:18.06:641,18,0	1/1:1,6:7:18.06:762,18,0	0/0:15,0:15:30.10:0,30,1571	0/0:18,0:18:47.95:0,48,2130	1/1:32,0:32:48.08:1587,48,0	1/1:11,14:25:27.09:1143,27,0	1/1:9,7:16:12.04:508,12,0	1/1:36,0:36:3:105,3,0	1/1:7,10:17:21.07:889,21,0	1/1:9,19:28:36.12:1390,36,0	1/1:6,6:12:15.05:635,15,0	1/1:3,12:15:36.12:1524,36,0	1/1:4,12:16:30.10:1270,30,0	1/1:5,16:21:39.13:1639,39,0	1/1:3,12:15:36.12:1512,36,0	1/1:4,10:14:21.07:886,21,0	0/0:27,0:27:78.25:0,78,5036	1/1:2,6:8:12.04:501,12,0	1/1:11,0:11:15.05:524,15,0	1/1:24,0:24:36.12:1257,36,0	1/1:15,0:15:5.95:123,6,0	1/1:4,14:18:27.09:1132,27,0	1/1:8,8:16:21.07:889,21,0	1/1:9,4:13:6.02:254,6,0	1/1:7,11:18:27.09:1115,27,0	1/1:5,15:20:39.10:1546,39,0	1/1:25,0:26:42.14:1467,42,0	1/1:8,0:8:12.04:419,12,0
chr10	43436662	.	ACGCCGTCAGAGAAAAC	A	19975.32	PASS	AB=1.000;AC=32;AF=0.571;AN=56;BaseQRankSum=16.169;DP=498;FS=10.258;HRun=0;HaplotypeScore=268.0360;InbreedingCoeff=-0.3278;MQ=79.75;MQ0=0;MQRankSum=-9.325;QD=45.81;ReadPosRankSum=7.809;VQSLOD=2.2711;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:22:99:312,0,382	0/1:7,0:7:26.73:457,0,27	0/0:17,0:17:51.17:0,51,2677	0/0:18,0:18:54.19:0,54,2717	1/1:0,30:30:63.21:2451,63,0	0/1:24,0:24:99:661,0,354	0/1:16,0:16:99:279,0,317	1/1:0,33:33:98.83:1131,99,0	0/1:16,0:16:99:523,0,196	0/1:27,0:27:99:774,0,257	0/1:11,0:11:99:369,0,171	0/1:14,0:14:53.57:916,0,54	0/1:15,0:15:59.66:763,0,60	0/1:20,0:20:99:976,0,116	0/1:15,0:15:74.37:902,0,74	0/1:13,0:13:99:525,0,113	0/0:27,0:27:81.28:0,81,5903	0/1:8,0:8:77.49:293,0,77	1/1:0,11:11:33.04:928,33,0	1/1:0,25:25:57.06:1973,57,0	1/1:0,15:15:6.02:206,6,0	0/1:17,0:17:69.50:673,0,70	0/1:14,0:14:99:523,0,200	0/1:13,0:13:99:142,0,169	0/1:16,0:16:99:646,0,195	0/1:19,0:19:75.15:915,0,75	1/1:1,26:27:42.14:2051,42,0	1/1:0,8:8:12.04:586,12,0
chr10	43436819	.	GT	G	3693.64	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-3.843;DP=579;FS=1.161;HRun=9;HaplotypeScore=103.8313;InbreedingCoeff=0.9704;MQ=71.30;MQ0=1;MQRankSum=0.610;QD=22.94;ReadPosRankSum=1.217;VQSLOD=3.6494;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:60.15:0,60,672	0/0:5,0:5:11.86:0,12,79	0/0:24,0:21:47.92:0,48,481	0/0:22,0:17:19.81:0,20,264	1/1:1,19:20:57.03:521,57,0	0/0:36,0:37:99:0,101,654	0/0:30,0:30:78.75:0,79,496	1/1:5,23:28:65.99:596,66,0	0/0:15,0:15:44.38:0,44,314	0/0:22,0:22:51.20:0,51,582	0/0:21,0:22:63.02:0,63,706	0/0:9,1:10:9.55:0,10,258	0/0:17,0:17:48.14:0,48,552	0/0:21,0:21:57.17:0,57,655	0/0:12,1:13:8.63:0,9,342	0/0:17,0:19:41.95:0,42,455	0/0:19,0:19:45.10:0,45,504	0/0:19,0:20:49.85:0,50,576	1/1:2,17:19:16.40:403,16,0	1/1:4,18:22:56.87:501,57,0	1/1:0,22:22:66.04:604,66,0	0/0:20,0:20:54.16:0,54,620	0/0:16,0:16:48.04:0,48,506	0/0:23,1:25:44.33:0,44,672	0/0:17,0:17:45.13:0,45,519	0/0:20,0:20:42.11:0,42,467	1/1:2,25:26:60.03:549,60,0	1/1:2,21:23:57.02:521,57,0
chr10	43437291	.	C	CG	7277.33	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-7.277;DP=640;FS=0.662;HRun=5;HaplotypeScore=101.3085;InbreedingCoeff=0.9990;MQ=86.53;MQ0=0;MQRankSum=-3.334;QD=34.33;ReadPosRankSum=3.343;VQSLOD=4.3363;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,46:51:99:1459,111,0	0/0:8,0:8:21.04:0,21,226	0/0:23,0:23:50.15:0,50,581	0/0:24,0:24:63.13:0,63,664	0/0:31,0:31:84.19:0,84,889	0/0:30,0:30:84.21:0,84,901	0/0:17,0:17:45.11:0,45,484	0/0:23,0:23:66.11:0,66,686	0/0:31,0:31:84.19:0,84,894	1/1:1,24:26:75.16:904,75,0	1/1:3,19:22:57.19:749,57,0	0/0:30,0:30:90.23:0,90,967	0/0:19,0:19:57.14:0,57,612	0/0:16,0:16:45.11:0,45,482	1/1:2,27:28:75.24:985,75,0	1/1:1,19:20:57.19:749,57,0	0/0:29,0:29:78.20:0,78,837	1/1:1,23:24:69.22:908,69,0	0/0:13,0:13:33.06:0,33,354	0/0:27,0:27:78.19:0,78,837	0/0:18,0:18:48.11:0,48,515	0/0:19,0:19:54.14:0,54,580	0/0:22,0:22:54.13:0,54,579	0/0:15,0:14:33.08:0,33,355	1/1:0,17:17:48.16:631,48,0	1/1:0,23:23:69.20:891,69,0	0/0:24,0:24:63.15:0,63,674	0/0:9,0:9:27.07:0,27,290
chr10	43437550	.	A	AC	3748.78	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=19.898;DP=697;FS=0.000;HRun=2;HaplotypeScore=140.3685;InbreedingCoeff=0.9893;MQ=74.19;MQ0=0;MQRankSum=-18.711;QD=15.88;ReadPosRankSum=0.866;VQSLOD=3.4910;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,129,1654	1/1:6,0:6:17.31:116,17,0	0/0:25,0:25:69.10:0,69,842	0/0:25,0:25:64.30:0,64,708	1/1:16,1:19:37.12:226,37,0	1/1:21,0:21:58.50:454,58,0	1/1:30,0:30:78.15:571,78,0	1/1:20,0:20:57.99:393,58,0	1/1:41,0:41:99:614,104,0	0/0:22,0:22:63.20:0,63,809	0/0:24,0:24:69.21:0,69,881	0/0:26,0:26:78.25:0,78,1012	0/0:23,0:23:66.21:0,66,857	0/0:32,0:32:96.31:0,96,1245	0/0:30,0:30:90.29:0,90,1168	0/0:42,0:42:99:0,120,1544	0/0:33,0:33:99:0,99,1268	0/0:22,0:22:66.21:0,66,855	1/1:21,0:21:58.60:443,59,0	1/1:19,1:20:49.40:275,49,0	1/1:20,4:24:25.76:150,26,0	0/0:28,0:28:81.15:0,81,1050	0/0:12,0:12:33.11:0,33,427	0/0:25,0:25:75.23:0,75,958	0/0:24,0:24:69.22:0,69,895	0/0:23,0:23:63.20:0,63,818	1/1:28,1:31:80.40:462,80,0	1/1:3,0:3:8.63:46,9,0
chr10	43437551	.	C	CCAGG	11458.27	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=16.731;DP=667;FS=0.322;HRun=0;HaplotypeScore=137.0058;InbreedingCoeff=0.9899;MQ=76.33;MQ0=0;MQRankSum=-17.464;QD=56.17;ReadPosRankSum=2.739;VQSLOD=5.8641;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,132,2664	1/1:0,6:6:18.06:397,18,0	0/0:25,0:25:72.14:0,72,1403	0/0:25,0:25:72.19:0,72,1269	1/1:6,11:17:36.09:735,36,0	1/1:3,18:21:57.20:1305,57,0	1/1:2,19:21:60.21:1319,60,0	1/1:3,14:17:45.11:995,45,0	1/1:2,34:36:99:2212,99,0	0/0:23,0:23:63.21:0,63,1289	0/0:25,0:25:69.24:0,69,1419	0/0:26,0:26:78.27:0,78,1632	0/0:23,0:23:69.22:0,69,1409	0/0:32,0:32:96.33:0,96,1997	0/0:30,0:30:90.31:0,90,1870	0/0:42,0:42:99:0,123,2522	0/0:33,0:33:99:0,99,2025	0/0:22,0:22:66.23:0,66,1381	1/1:4,12:16:45.15:977,45,0	1/1:1,19:20:51.18:1107,51,0	1/1:6,13:19:21.06:475,21,0	0/0:27,0:27:81.28:0,81,1696	0/0:12,0:12:33.11:0,33,682	0/0:26,0:26:75.26:0,75,1550	0/0:24,0:24:69.24:0,69,1440	0/0:22,0:22:63.22:0,63,1321	1/1:3,25:28:78.27:1732,78,0	1/1:0,3:3:9.03:205,9,0
chr10	43437552	.	T	TA	6122.50	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=19.715;DP=708;FS=2.977;HRun=0;HaplotypeScore=135.9062;InbreedingCoeff=0.9973;MQ=74.49;MQ0=0;MQRankSum=-18.930;QD=25.30;ReadPosRankSum=0.688;VQSLOD=5.2062;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,132,1808	1/1:2,6:8:24.05:258,24,0	0/0:25,0:25:75.20:0,75,964	0/0:24,0:24:69.02:0,69,832	1/1:12,12:24:44.24:412,44,0	1/1:7,18:25:69.07:688,69,0	1/1:4,19:23:66.03:618,66,0	1/1:9,14:23:69.13:715,69,0	1/1:3,34:37:99:1019,105,0	0/0:24,0:24:63.21:0,63,868	0/0:26,0:26:72.21:0,72,972	0/0:26,0:26:78.26:0,78,1090	0/0:23,0:23:69.23:0,69,964	0/0:33,0:33:96.31:0,96,1326	0/0:30,0:30:90.28:0,90,1241	0/0:43,0:43:99:0,123,1719	0/0:32,0:32:96.32:0,96,1341	0/0:22,0:22:66.22:0,66,923	1/1:1,16:17:48.06:478,48,0	1/1:7,19:26:59.61:552,60,0	1/1:7,13:20:32.61:293,33,0	0/0:27,0:27:81.27:0,81,1132	0/0:12,0:12:33.11:0,33,461	0/0:28,0:28:78.22:0,78,1067	0/0:24,0:24:69.23:0,69,964	0/0:22,0:22:63.21:0,63,881	1/1:9,25:34:95.93:926,96,0	1/1:2,3:5:15.03:163,15,0
chr10	43437891	.	GT	G	2507.99	PASS	AB=0.981;AC=24;AF=0.429;AN=56;BaseQRankSum=8.937;DP=447;FS=9.441;HRun=11;HaplotypeScore=53.4134;InbreedingCoeff=0.8428;MQ=78.67;MQ0=3;MQRankSum=-2.759;QD=12.23;ReadPosRankSum=-0.286;VQSLOD=2.2475;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:72.13:0,72,747	1/1:1,7:8:17.96:147,18,0	0/1:24,1:19:9.36:11,0,9	0/0:24,0:15:21.52:0,22,144	1/1:3,0:23:40.74:118,41,0	1/1:4,14:19:34.98:277,35,0	1/1:1,10:11:23.97:197,24,0	1/1:10,24:34:71.74:577,72,0	1/1:0,9:9:20.98:172,21,0	0/0:23,1:24:35.46:0,35,564	0/0:23,1:25:41.27:0,41,596	0/0:8,0:8:20.79:0,21,203	0/0:10,0:10:25.31:0,25,259	0/0:4,0:4:8.99:0,9,79	0/0:11,0:11:24.02:0,24,244	0/0:8,1:9:2.43:0,2,231	0/0:27,1:28:47.26:0,47,667	0/0:24,0:24:63.10:0,63,650	1/1:1,9:11:28.96:222,29,0	1/1:2,21:23:49.96:404,50,0	1/1:3,7:10:20.94:172,21,0	0/1:3,0:3:0.90:1,0,55	0/0:7,0:8:14.87:0,15,142	0/0:2,0:2:6.02:0,6,64	0/0:16,0:18:26.16:0,26,446	0/0:19,2:21:29.51:0,30,511	1/1:4,13:18:31.98:252,32,0	1/1:1,9:10:20.97:172,21,0
chr10	43438193	.	CTG	C	1448.63	PASS	AB=0.853;AC=29;AF=0.537;AN=54;BaseQRankSum=9.507;DP=600;FS=7.629;HRun=0;HaplotypeScore=132.0505;InbreedingCoeff=0.4619;MQ=44.98;MQ0=38;MQRankSum=-7.270;QD=5.14;ReadPosRankSum=-0.847;VQSLOD=2.4949;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,14:18:6.02:71,6,0	0/1:4,1:5:14.92:28,0,15	0/0:45,0:7:6.02:0,6,88	0/0:42,0:11:2.70:0,3,97	0/1:21,2:20:16.72:32,0,17	1/1:10,4:14:11.91:104,12,0	0/1:12,6:16:8.55:66,0,9	1/1:18,4:17:23.97:245,24,0	1/1:7,10:17:0.94:1,1,0	1/1:5,6:10:14.89:171,15,0	0/0:2,6:7:0:0,0,0	0/0:33,0:32:49.14:0,49,1300	0/0:20,0:18:38.62:0,39,574	0/0:29,0:29:56.83:0,57,898	1/1:3,9:12:6.01:76,6,0	1/1:5,5:9:5.96:59,6,0	0/0:50,0:50:99:0,120,1979	1/1:2,6:8:1.73:36,2,0	0/1:21,4:14:5.94:139,0,6	1/1:5,4:9:0.45:1,0,0	1/1:41,10:42:14.68:115,15,0	0/0:22,0:21:54.14:0,54,834	0/0:21,0:21:48.11:0,48,712	0/0:44,1:44:73.07:0,73,1653	./.	1/1:1,9:10:24.49:283,24,0	1/1:6,10:16:17.90:171,18,0	0/1:8,1:8:13.63:31,0,14
chr10	43438207	.	CTG	C	149.74	PASS	AB=1.000;AC=21;AF=0.389;AN=54;BaseQRankSum=7.542;DP=576;FS=7.543;HRun=0;HaplotypeScore=144.5826;InbreedingCoeff=0.4117;MQ=45.21;MQ0=44;MQRankSum=-6.904;QD=0.86;ReadPosRankSum=0.759;VQSLOD=1.8050;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,3:13:5.23:37,5,0	0/0:3,0:3:3.45:0,3,25	0/0:37,0:2:6.02:0,6,104	0/0:46,0:7:9:0,9,124	0/0:24,2:25:5.28:0,5,62	1/1:13,0:13:0.68:6,1,0	0/0:22,0:18:0.29:0,0,44	0/0:20,1:16:28.40:0,28,321	1/1:16,0:16:1.41:3,1,0	1/1:7,2:8:8.78:67,9,0	0/0:6,1:6:0:0,0,0	0/0:32,0:31:77.77:0,78,1258	0/0:20,0:18:39.12:0,39,631	0/0:32,0:32:75.22:0,75,1218	1/1:9,1:10:2.48:7,2,0	1/1:8,0:7:5.48:35,5,0	0/0:49,0:49:99:0,132,2212	1/1:6,1:7:3.47:41,3,0	0/1:15,0:8:28.04:28,0,108	1/1:13,0:11:0.44:1,0,0	0/1:42,0:32:6.31:6,0,12	0/0:29,0:26:66.17:0,66,1117	0/0:21,0:21:54.14:0,54,877	0/0:49,0:48:99:0,123,1983	./.	1/1:9,1:10:0.37:39,0,0	0/1:14,0:14:9.79:25,0,10	0/0:8,0:7:5.71:0,6,82
chr10	43438215	.	GTA	G	418.93	PASS	AB=0.812;AC=25;AF=0.463;AN=54;BaseQRankSum=8.748;DP=572;FS=4.587;HRun=0;HaplotypeScore=144.7963;InbreedingCoeff=0.3981;MQ=45.75;MQ0=44;MQRankSum=-7.674;QD=2.16;ReadPosRankSum=-1.730;VQSLOD=2.2175;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:9:5.97:45,6,0	1/1:3,1:4:2.92:17,3,0	0/0:37,0:2:6.02:0,6,116	0/0:38,0:6:8.92:0,9,132	0/0:27,0:26:2.61:0,3,57	1/1:10,3:13:4.92:49,5,0	0/1:18,5:19:15.20:15,0,52	0/0:24,0:19:31.10:0,31,509	1/1:10,5:15:1.41:3,1,0	1/1:7,0:6:15.96:98,16,0	0/0:5,0:5:0:0,0,0	0/0:33,0:32:84.24:0,84,1488	0/0:20,0:18:39.11:0,39,656	0/0:35,0:35:84.17:0,84,1426	1/1:9,0:9:5.92:40,6,0	1/1:8,0:7:4.99:39,5,0	0/0:53,0:53:99:0,147,2576	1/1:6,0:6:5.05:38,5,0	0/1:15,2:11:63.15:63,0,201	1/1:9,3:10:0.42:1,0,0	0/1:32,7:28:8.64:9,0,25	0/0:29,0:27:72.12:0,72,1264	0/0:24,0:24:62.32:0,62,1016	0/0:53,0:52:99:0,144,2451	./.	1/1:6,0:6:14.79:98,15,0	0/1:5,9:14:25.43:61,0,25	0/1:7,1:7:12.63:13,0,88
chr10	43438229	.	GTC	G	290.24	PASS	AB=0.888;AC=20;AF=0.385;AN=52;BaseQRankSum=8.138;DP=571;FS=10.133;HRun=0;HaplotypeScore=144.5588;InbreedingCoeff=0.3933;MQ=44.00;MQ0=47;MQRankSum=-5.909;QD=2.09;ReadPosRankSum=-5.303;VQSLOD=-0.3222;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:10,0:6:5.50:46,6,0	0/1:3,1:4:3.10:3,0,7	0/0:33,0:2:6.02:0,6,84	0/1:42,0:7:10.88:11,0,170	0/0:30,0:29:8.48:0,8,115	0/1:12,0:12:2.51:39,0,3	0/0:23,0:20:4.83:0,5,109	0/0:31,2:22:25.50:0,26,865	1/1:18,0:18:5.13:14,5,0	1/1:4,0:4:11.87:99,12,0	./.	0/0:34,0:32:81.18:0,81,1434	0/0:21,0:18:48.16:0,48,880	0/0:34,0:34:75.22:0,75,1362	1/1:4,0:4:5.85:34,6,0	1/1:4,0:4:6.02:73,6,0	0/0:50,0:50:99:0,138,2565	1/1:2,0:2:3.01:42,3,0	0/1:17,1:10:4.22:4,0,382	0/0:15,1:14:2.79:0,3,53	0/0:43,2:36:6.44:0,6,107	0/0:35,0:33:84.19:0,84,1471	0/0:25,0:25:51.02:0,51,1088	0/0:47,0:46:99:0,120,2210	./.	1/1:2,0:2:5.89:58,6,0	0/1:7,5:12:15.73:16,0,43	0/1:6,1:7:15.14:15,0,102
chr10	43438233	.	GTGTC	G	134.03	PASS	AB=0.991;AC=14;AF=0.292;AN=48;BaseQRankSum=7.094;DP=599;FS=9.739;HRun=0;HaplotypeScore=161.2828;InbreedingCoeff=0.0945;MQ=43.91;MQ0=43;MQRankSum=-3.313;QD=0.86;ReadPosRankSum=-5.994;VQSLOD=-0.5684;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,0:5:0.47:1,0,0	1/1:4,1:5:2.96:19,3,0	./.	0/0:39,0:7:9:0,9,176	0/0:30,1:30:6.38:0,6,119	0/1:14,0:14:24.93:58,0,25	0/0:26,4:27:4.92:0,5,151	0/0:33,0:22:49.83:0,50,1270	0/0:19,0:19:4.19:0,4,38	0/0:2,0:2:4.72:0,5,18	./.	0/0:34,0:32:75.26:0,75,1953	0/0:23,0:20:51.05:0,51,1203	0/0:34,0:34:72.23:0,72,1819	./.	1/1:4,0:4:4.04:13,4,0	0/0:50,0:50:99:0,138,3215	0/0:3,0:3:2.95:0,3,23	0/1:21,0:14:28.15:28,0,575	0/1:24,1:23:36.48:36,0,87	0/1:53,1:44:34.74:35,0,50	0/0:36,0:34:84.27:0,84,2030	0/0:24,0:24:60.20:0,60,1536	0/0:47,0:46:99:0,111,2681	./.	1/1:2,0:2:1.82:5,2,0	0/1:13,0:13:14.09:14,0,80	0/1:9,0:9:56.34:56,0,135
chr10	43438241	.	G	GTGTGTGTC	2015.31	PASS	AB=0.835;AC=18;AF=0.429;AN=42;BaseQRankSum=-1.000;DP=631;FS=16.818;HRun=0;HaplotypeScore=215.2482;InbreedingCoeff=0.4579;MQ=43.03;MQ0=36;MQRankSum=-5.025;QD=6.93;ReadPosRankSum=-3.555;VQSLOD=0.4241;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/1:3,4:9:0:0,0,0	./.	0/0:30,0:4:3.01:0,3,56	1/1:11,19:31:2.54:19,3,0	0/1:14,4:18:10.97:346,0,11	1/1:34,0:32:7.33:155,7,0	0/1:33,0:24:6.05:447,0,6	1/1:17,4:21:3.50:220,3,0	0/0:5,0:3:2.04:0,2,6	./.	0/0:36,0:34:69.19:0,69,1302	0/0:24,0:21:42.12:0,42,895	0/0:34,0:34:57.18:0,57,1349	./.	./.	0/0:54,0:53:99:0,111,2257	0/0:5,0:5:8.58:0,9,60	1/1:22,0:15:1.23:406,1,0	1/1:10,12:28:0.91:54,1,0	0/1:67,0:58:5.09:56,0,5	0/0:40,0:38:69.18:0,69,1491	0/0:23,0:23:35.27:0,35,924	0/0:42,0:41:81.27:0,81,1876	./.	./.	1/1:7,5:13:8.77:262,9,0	1/1:1,6:9:8.70:192,9,0
chr10	43438261	.	GTC	G	784.66	PASS	AB=0.909;AC=12;AF=0.273;AN=44;BaseQRankSum=6.810;DP=692;FS=6.269;HRun=0;HaplotypeScore=195.5844;InbreedingCoeff=0.1522;MQ=41.66;MQ0=35;MQRankSum=-7.508;QD=3.04;ReadPosRankSum=-4.927;VQSLOD=0.4309;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:15,0:15:11.45:0,11,170	0/0:19,0:2:3.01:0,3,58	0/0:22,0:3:6.02:0,6,91	0/0:34,1:34:11.74:0,12,229	0/1:19,3:21:19.36:19,0,204	0/1:36,6:39:49.77:50,0,259	0/1:38,6:26:99:395,0,235	0/0:31,7:37:16.18:0,16,470	1/1:5,0:3:3.48:35,3,0	./.	0/0:38,0:36:87.08:0,87,1328	0/0:30,0:27:69.19:0,69,1200	0/0:32,0:32:72.18:0,72,1303	./.	./.	0/0:53,0:52:99:0,99,2161	1/1:2,2:4:5.32:121,5,0	0/1:24,3:17:99:156,0,216	0/0:33,1:32:11.14:0,11,177	0/1:82,8:80:36:36,0,388	0/0:40,0:38:84.22:0,84,1462	0/0:24,0:23:54.03:0,54,830	0/0:44,0:43:99:0,102,1749	./.	./.	0/1:15,0:14:27.80:28,0,177	1/1:9,0:9:7.79:84,8,0
chr10	43438327	.	C	CTG	376.86	PASS	AB=0.960;AC=11;AF=0.250;AN=44;BaseQRankSum=2.354;DP=611;FS=5.759;HRun=0;HaplotypeScore=219.1325;InbreedingCoeff=-0.0198;MQ=46.15;MQ0=29;MQRankSum=-3.294;QD=1.64;ReadPosRankSum=-2.357;VQSLOD=1.9219;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:1,0:1:2.37:8,2,0	0/1:14,1:15:56.31:123,0,56	0/0:25,0:2:6.02:0,6,73	0/0:39,0:10:2.19:0,2,105	0/0:19,0:17:6.02:0,6,77	0/1:18,1:17:65.89:66,0,118	0/1:35,0:32:99:118,0,118	0/0:29,0:24:36.07:0,36,395	0/1:32,0:30:8.11:8,0,285	./.	./.	0/0:35,0:34:63.20:0,63,813	0/0:29,0:29:75.24:0,75,973	0/0:33,0:30:63.15:0,63,793	0/0:2,0:1:0:0,0,0	./.	0/0:61,0:60:99:0,118,1551	./.	0/1:22,2:17:93.79:94,0,117	1/1:19,0:18:3.01:33,3,0	0/1:69,2:60:11.90:12,0,144	0/0:28,0:28:24.08:0,24,312	0/0:15,0:14:20.10:0,20,267	0/0:59,0:53:99:0,102,1279	./.	./.	0/1:13,1:13:40.54:41,0,155	0/0:4,0:4:2.94:0,3,38
chr10	43438345	.	GTC	G	932.83	PASS	AB=0.862;AC=16;AF=0.381;AN=42;BaseQRankSum=-0.406;DP=461;FS=33.863;HRun=0;HaplotypeScore=179.3208;InbreedingCoeff=0.3158;MQ=46.49;MQ0=13;MQRankSum=-4.535;QD=5.69;ReadPosRankSum=-4.975;VQSLOD=0.2839;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,0:1:2.04:6,2,0	0/1:10,2:12:18.76:37,0,19	0/0:14,0:2:5.69:0,6,58	0/0:28,0:9:5.61:0,6,69	0/1:9,0:8:0:0,0,0	1/1:2,9:9:11.94:131,12,0	1/1:12,12:21:11.90:105,12,0	0/1:9,0:4:8.79:65,0,9	1/1:17,12:27:29.49:476,29,0	./.	./.	0/0:33,0:32:54.09:0,54,971	0/0:26,0:26:69.24:0,69,1290	0/0:35,0:32:66.16:0,66,1207	./.	./.	0/0:50,1:50:73.51:0,74,1904	./.	0/1:8,1:6:41.68:78,0,42	0/0:3,7:10:2.80:0,3,13	0/1:31,14:36:17.55:55,0,18	0/0:24,1:25:23.90:0,24,386	0/0:12,0:11:15.05:0,15,289	0/0:60,1:54:99:0,99,1788	./.	./.	0/1:6,7:12:27.73:79,0,28	1/1:1,1:2:3.01:46,3,0
chr10	43438351	.	GTC	G	62.54	PASS	AB=0.964;AC=12;AF=0.316;AN=38;BaseQRankSum=5.123;DP=409;FS=13.255;HRun=0;HaplotypeScore=168.4101;InbreedingCoeff=0.4298;MQ=42.91;MQ0=8;MQRankSum=-5.287;QD=0.52;ReadPosRankSum=-2.266;VQSLOD=1.7765;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:1,0:1:2.90:0,3,16	0/0:6,0:6:2.90:0,3,16	./.	0/0:23,0:6:5.77:0,6,68	0/1:6,0:5:0:0,0,0	1/1:10,0:8:4.70:17,5,0	0/1:20,0:17:3.61:4,0,9	0/0:6,0:1:2.68:0,3,11	1/1:23,2:23:15.38:91,15,0	./.	./.	0/0:29,0:28:48.13:0,48,789	0/0:27,0:27:66.17:0,66,991	0/0:36,0:33:63.50:0,63,956	./.	./.	0/0:46,0:45:99:0,103,1459	./.	0/1:5,1:4:19.17:24,0,19	./.	1/1:40,1:33:1.06:4,1,0	0/0:24,0:24:18.06:0,18,299	0/0:13,0:12:15.05:0,15,235	0/0:57,0:50:90.26:0,90,1412	./.	./.	0/1:11,0:10:0.77:31,0,1	1/1:2,0:2:2.60:10,3,0
chr10	43438380	.	CTG	C	246.52	PASS	AB=0.884;AC=15;AF=0.395;AN=38;BaseQRankSum=2.883;DP=404;FS=10.649;HRun=0;HaplotypeScore=112.5051;InbreedingCoeff=0.3866;MQ=34.46;MQ0=29;MQRankSum=-4.049;QD=2.90;ReadPosRankSum=-3.008;VQSLOD=0.8818;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:1,1:2:3.01:38,3,0	./.	0/0:30,0:3:7.26:0,7,78	0/0:57,0:7:6.82:0,7,159	0/1:1,0:1:0:0,0,0	0/0:6,1:5:3.01:0,3,33	1/1:11,2:10:1.82:5,2,0	1/1:6,6:4:12.04:141,12,0	0/1:7,6:12:24.28:82,0,24	./.	./.	0/0:27,0:26:27.04:0,27,408	0/1:30,1:29:8.01:8,0,382	0/0:37,0:35:4.71:0,5,554	./.	./.	0/0:33,0:31:28.22:0,28,518	1/1:0,3:3:3.01:38,3,0	1/1:2,2:3:5.98:53,6,0	./.	0/0:36,4:28:1.24:0,1,3	0/0:23,0:22:9.01:0,9,117	0/0:12,0:12:3:0,3,25	0/0:42,0:37:33.10:0,33,494	./.	./.	1/1:4,1:4:0.34:1,0,0	./.
chr10	43438394	.	CTG	C	48.22	PASS	AB=0.874;AC=18;AF=0.500;AN=36;BaseQRankSum=3.744;DP=380;FS=11.897;HRun=0;HaplotypeScore=105.4056;InbreedingCoeff=0.2484;MQ=28.79;MQ0=26;MQRankSum=-2.087;QD=0.30;ReadPosRankSum=-0.070;VQSLOD=1.0016;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,0:2:2.88:15,3,0	0/1:3,0:2:0:0,0,0	0/0:27,0:3:3.01:0,3,39	0/0:49,0:5:12:0,12,154	./.	0/0:4,1:5:0:0,0,0	1/1:6,4:7:1.82:5,2,0	1/1:8,3:5:3.01:35,3,0	0/1:5,8:15:24.96:25,0,59	./.	./.	0/0:28,1:24:17.74:0,18,217	0/0:26,2:25:18.72:0,19,258	0/0:33,0:31:30.21:0,30,388	./.	./.	0/1:26,1:24:12.54:13,0,285	1/1:3,0:3:2.73:13,3,0	0/0:8,0:5:1.49:0,1,61	./.	1/1:34,10:35:2.55:15,3,0	./.	./.	0/1:37,3:31:8.78:9,0,183	./.	./.	1/1:3,0:3:0.41:1,0,0	1/1:2,1:3:3.01:31,3,0
chr10	43438423	.	GTCT	G	134.36	PASS	AB=0.964;AC=12;AF=0.353;AN=34;BaseQRankSum=1.053;DP=289;FS=4.506;HRun=0;HaplotypeScore=110.2544;InbreedingCoeff=0.1659;MQ=25.27;MQ0=4;MQRankSum=-1.341;QD=1.29;ReadPosRankSum=0.609;VQSLOD=2.0005;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:3,0:3:2.97:20,3,0	0/0:2,1:3:0.47:0,0,1	./.	./.	./.	0/0:10,0:10:1.09:0,1,3	0/1:14,0:11:0.07:1,0,0	0/0:10,0:10:1.15:0,1,109	0/1:21,1:22:32.75:59,0,33	./.	./.	0/0:24,1:20:2.67:0,3,25	0/1:24,3:24:7.44:7,0,38	0/0:29,0:27:5.66:0,6,31	./.	./.	0/1:20,0:16:21.16:21,0,75	1/1:8,0:8:8.56:43,9,0	1/1:7,0:4:5.07:44,5,0	./.	0/0:28,0:25:2.56:0,3,6	./.	0/0:10,0:10:0:0,0,0	0/0:28,2:20:2.99:0,3,40	./.	./.	0/0:1,0:1:1.82:0,2,5	1/1:2,1:3:5.85:44,6,0
chr10	43438425	.	CT	C	829.52	PASS	AB=0.500;AC=23;AF=0.719;AN=32;BaseQRankSum=-3.211;DP=297;FS=0.000;HRun=1;HaplotypeScore=109.1391;InbreedingCoeff=0.4431;MQ=26.27;MQ0=4;MQRankSum=1.391;QD=3.99;ReadPosRankSum=1.597;VQSLOD=0.2839;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,1:3:2.99:24,3,0	./.	./.	./.	./.	0/0:1,9:10:1.01:0,1,4	0/1:0,14:12:0.04:0,0,0	1/1:0,12:13:31.09:199,31,0	1/1:1,18:22:11.40:69,11,0	./.	./.	1/1:7,19:22:8.60:70,9,0	1/1:6,22:25:23.60:174,24,0	1/1:4,25:27:5.36:46,5,0	./.	./.	1/1:2,18:16:23.80:175,24,0	1/1:5,3:8:7.78:49,8,0	1/1:4,3:4:10.18:52,10,0	./.	0/0:13,11:27:2.52:0,3,6	./.	0/0:0,10:10:0:0,0,0	1/1:10,22:23:5.68:33,6,0	./.	./.	0/0:1,0:1:0.89:0,1,2	1/1:1,1:3:4.74:21,5,0
chr10	43438426	.	T	TG	67.20	PASS	AB=0.992;AC=12;AF=0.375;AN=32;BaseQRankSum=1.404;DP=303;FS=12.377;HRun=0;HaplotypeScore=110.5843;InbreedingCoeff=0.2845;MQ=27.35;MQ0=4;MQRankSum=-0.761;QD=0.49;ReadPosRankSum=-0.339;VQSLOD=0.9262;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:3,0:3:1.25:0,1,3	./.	./.	./.	./.	0/0:11,0:11:0.97:0,1,3	1/1:18,0:15:1.76:5,2,0	0/0:14,0:14:10.08:0,10,30	1/1:23,0:23:1.03:13,1,0	./.	./.	0/1:26,0:21:0.79:1,0,3	0/1:29,1:26:1.91:17,0,2	0/0:27,0:24:2.74:0,3,8	./.	./.	1/1:18,2:16:3.65:62,4,0	0/1:8,0:8:1.49:8,0,1	1/1:7,1:5:4.77:47,5,0	./.	0/0:31,4:29:2.51:0,3,5	./.	0/0:10,0:10:0:0,0,0	0/0:30,1:23:2.44:0,2,6	./.	./.	0/0:1,0:1:0.89:0,1,2	0/1:3,0:3:0.53:6,0,1
chr10	43438458	.	GTA	G	602.66	PASS	AB=0.787;AC=19;AF=0.365;AN=52;BaseQRankSum=2.823;DP=636;FS=25.716;HRun=0;HaplotypeScore=139.3667;InbreedingCoeff=0.3736;MQ=34.01;MQ0=45;MQRankSum=2.817;QD=3.70;ReadPosRankSum=-2.161;VQSLOD=0.9438;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:3,16:17:9.40:138,9,0	0/1:7,1:8:14.91:15,0,15	0/0:6,0:1:3.01:0,3,56	./.	1/1:18,0:12:5.62:27,6,0	0/0:18,0:16:2.96:0,3,22	0/0:48,4:43:5.39:0,5,404	0/0:63,0:47:99:0,115,2180	0/0:45,0:45:30.53:0,31,318	1/1:5,5:6:15.05:227,15,0	./.	0/0:33,0:28:51.03:0,51,822	0/0:35,0:32:44.87:0,45,760	0/0:36,0:32:44.32:0,44,685	0/1:3,8:9:0:0,0,1	0/0:0,6:6:0:0,0,0	0/0:27,0:23:12.78:0,13,751	0/1:4,12:15:27.39:37,0,27	0/1:29,1:16:1.10:1,0,595	1/1:15,1:12:3.01:38,3,0	0/0:79,8:73:14.18:0,14,371	0/0:17,0:14:11.82:0,12,124	0/1:11,0:9:12.23:12,0,27	0/0:41,0:30:30.04:0,30,490	0/1:0,2:2:0:0,0,0	1/1:5,5:5:15.05:229,15,0	1/1:7,0:6:1.63:16,2,0	0/1:5,0:4:16.20:16,0,100
chr10	43438468	.	CTG	C	51.29	PASS	AB=1.000;AC=8;AF=0.148;AN=54;BaseQRankSum=1.949;DP=696;FS=13.956;HRun=0;HaplotypeScore=155.5284;InbreedingCoeff=0.3748;MQ=35.91;MQ0=49;MQRankSum=1.390;QD=0.72;ReadPosRankSum=-0.123;VQSLOD=1.9178;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:28:23.94:0,24,213	0/0:8,0:8:6.02:0,6,84	0/0:7,0:1:3.01:0,3,49	./.	1/1:10,8:12:6.02:76,6,0	0/0:21,0:18:2.99:0,3,50	0/0:52,1:46:41.45:0,41,627	0/0:65,0:48:96.05:0,96,1441	0/0:47,0:47:52.89:0,53,705	0/0:9,0:6:14.98:0,15,144	0/0:5,0:4:6.02:0,6,80	0/0:34,0:29:48.10:0,48,774	0/0:34,0:32:45.59:0,46,724	0/0:35,0:31:45.50:0,46,716	0/1:13,0:11:0:0,0,1	0/1:11,0:11:0:0,0,0	0/0:31,1:28:35.13:0,35,953	0/0:21,0:20:21.01:0,21,250	0/0:31,0:16:38.65:0,39,547	1/1:14,0:11:3.01:30,3,0	0/0:95,0:80:58.95:0,59,879	0/0:20,0:17:27.09:0,27,408	0/1:9,0:7:32.10:32,0,44	0/0:45,0:37:45.12:0,45,707	0/0:4,0:4:6:0,6,89	0/0:12,0:7:20.76:0,21,185	0/0:8,0:7:15.05:0,15,210	0/1:5,0:4:27.91:28,0,78
chr10	43440200	.	AT	A	6140.33	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=10.385;DP=738;FS=0.968;HRun=7;HaplotypeScore=80.2551;InbreedingCoeff=0.9996;MQ=65.50;MQ0=0;MQRankSum=-0.752;QD=25.69;ReadPosRankSum=2.835;VQSLOD=5.4588;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,30:32:87.20:887,87,0	0/0:12,0:12:36.12:0,36,452	0/0:15,0:13:29.02:0,29,373	0/0:13,0:13:27.39:0,27,313	0/0:23,0:23:60.19:0,60,753	0/0:26,0:26:78.15:0,78,944	0/0:31,0:31:90.27:0,90,1112	0/0:34,0:34:90.26:0,90,1098	0/0:26,0:26:72.22:0,72,890	1/1:5,46:51:99:1280,129,0	1/1:1,14:15:30.06:306,30,0	0/0:27,0:27:75.24:0,75,943	0/0:33,0:32:90.27:0,90,1117	0/0:29,0:28:78.25:0,78,973	1/1:2,34:36:96.21:978,96,0	1/1:3,29:32:78.18:796,78,0	0/0:24,0:24:66.21:0,66,829	1/1:4,25:29:72.13:735,72,0	0/0:15,0:15:39.09:0,39,455	0/0:28,0:28:81.22:0,81,991	0/0:43,0:43:99:0,108,1345	0/0:24,0:24:69.08:0,69,796	0/0:18,0:18:51.10:0,51,611	0/0:29,0:29:75.22:0,75,929	1/1:2,23:24:66.03:640,66,0	1/1:1,18:19:51.11:520,51,0	0/0:36,0:36:99:0,102,1242	0/0:13,0:13:39.12:0,39,491
chr10	43440310	.	T	TCTCTCTCTC	2214.75	PASS	AB=0.720;AC=12;AF=0.214;AN=56;BaseQRankSum=4.492;DP=776;FS=1.166;HRun=0;HaplotypeScore=223.4818;InbreedingCoeff=-0.2789;MQ=58.86;MQ0=28;MQRankSum=-6.195;QD=7.69;ReadPosRankSum=-0.454;VQSLOD=2.5130;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:44:99:0,108,2415	0/1:5,0:9:34.17:34,0,69	0/0:46,0:18:19.98:0,20,484	0/0:50,0:26:20.96:0,21,516	0/0:12,7:25:20.56:0,21,236	0/1:10,0:26:99:153,0,228	0/0:19,0:40:6.98:0,7,513	0/1:31,0:28:99:389,0,601	0/1:9,0:29:99:246,0,253	0/0:25,0:25:65.26:0,65,1546	0/0:30,0:32:64.56:0,65,999	0/1:8,9:24:99:213,0,221	0/1:23,0:20:99:210,0,270	0/1:8,9:22:99:181,0,168	0/0:32,0:32:57.19:0,57,1439	0/0:23,0:25:50.25:0,50,1287	0/0:29,0:29:84.28:0,84,2286	0/0:22,0:23:60.20:0,60,1601	0/1:9,0:13:99:275,0,180	0/1:15,0:27:90.57:91,0,393	0/1:23,0:27:26.68:27,0,414	0/0:6,10:22:18.42:0,18,198	0/0:12,8:27:24.84:0,25,263	0/0:16,5:26:23.53:0,24,243	0/0:15,0:16:39.05:0,39,1026	0/0:23,0:23:51.11:0,51,1003	0/1:11,0:22:99:372,0,293	0/1:14,0:20:99:174,0,447
chr10	43440361	.	TGTGC	T	5731.06	PASS	AB=1.000;AC=43;AF=0.796;AN=54;BaseQRankSum=1.938;DP=658;FS=4.862;HRun=0;HaplotypeScore=190.0994;InbreedingCoeff=0.4669;MQ=47.67;MQ0=20;MQRankSum=-2.565;QD=9.86;ReadPosRankSum=-0.370;VQSLOD=4.1304;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:36,0:36:23.39:182,23,0	0/0:15,0:15:1.82:0,2,335	0/1:29,0:5:3.96:19,0,4	0/1:33,0:3:0.96:1,0,10	./.	0/0:24,0:24:38.62:0,39,582	0/1:33,0:33:99:105,0,295	1/1:24,0:22:40.49:295,40,0	0/1:23,0:22:34.97:35,0,355	1/1:34,0:33:47.97:420,48,0	0/1:26,0:25:0.07:0,0,0	1/1:19,8:27:38.09:549,38,0	1/1:15,7:22:53.65:770,54,0	1/1:14,11:25:47.98:655,48,0	1/1:29,0:30:3:25,3,0	1/1:15,0:17:6.44:49,6,0	0/0:31,0:31:79.32:0,79,1034	1/1:18,0:17:35.78:267,36,0	1/1:13,0:13:32.87:259,33,0	1/1:16,0:17:13.65:129,14,0	1/1:40,0:33:23.28:189,23,0	1/1:15,3:18:12.39:79,12,0	1/1:16,5:20:25.58:317,26,0	1/1:16,10:25:27.04:450,27,0	1/1:19,0:21:12.67:104,13,0	1/1:25,0:26:62.72:516,63,0	1/1:17,0:18:26.90:255,27,0	1/1:4,0:4:6:59,6,0
chr10	43440363	.	TGCGTGC	T	4747.83	PASS	AB=0.927;AC=33;AF=0.611;AN=54;BaseQRankSum=2.610;DP=650;FS=13.497;HRun=0;HaplotypeScore=203.6347;InbreedingCoeff=0.1514;MQ=47.86;MQ0=20;MQRankSum=-4.580;QD=9.24;ReadPosRankSum=-3.399;VQSLOD=1.9983;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:28,1:36:24.06:376,24,0	0/0:14,0:15:21.37:0,21,546	0/1:29,0:5:39.14:39,0,42	0/0:32,0:3:5.66:0,6,42	./.	0/0:24,0:24:30.90:0,31,907	0/1:30,0:30:22.45:22,0,619	1/1:22,0:20:16.08:157,16,0	0/1:23,0:22:69.93:70,0,543	1/1:2,28:29:54.11:999,54,0	0/1:4,24:27:0.36:0,0,0	0/1:28,0:28:24.39:58,0,24	0/1:16,0:22:28.13:90,0,28	0/1:23,1:25:17.96:97,0,18	1/1:2,27:29:3.01:70,3,0	1/1:3,13:16:6.49:118,6,0	0/0:32,0:32:84.07:0,84,1821	1/1:15,3:17:42.06:603,42,0	1/1:12,0:12:20.60:81,21,0	0/1:17,0:17:11.19:84,0,11	0/1:40,0:33:1.76:19,0,2	0/1:17,1:18:6.46:38,0,6	0/1:21,0:20:19.65:20,0,61	0/0:26,0:25:13.29:0,13,49	1/1:12,9:21:12.93:225,13,0	1/1:2,24:26:66.94:1184,67,0	1/1:18,0:19:6.68:346,7,0	1/1:4,0:4:5.97:52,6,0
chr10	43440365	.	CGTGCGTGT	C	3222.65	PASS	AB=0.986;AC=34;AF=0.630;AN=54;BaseQRankSum=0.731;DP=646;FS=8.017;HRun=0;HaplotypeScore=218.9718;InbreedingCoeff=0.2781;MQ=48.03;MQ0=20;MQRankSum=-4.273;QD=6.21;ReadPosRankSum=-2.779;VQSLOD=1.3236;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:38,0:38:7.52:73,0,8	0/0:14,0:14:5.13:0,5,748	0/1:29,0:6:16.40:16,0,19	0/1:29,0:3:0.96:1,0,10	./.	0/0:24,0:24:47.90:0,48,1352	0/1:30,0:30:68.05:68,0,941	1/1:4,21:23:28.29:429,28,0	0/1:22,0:21:59.14:59,0,874	1/1:29,0:28:43.69:288,44,0	0/1:27,0:26:0.47:0,0,1	0/0:26,1:27:45.40:0,45,404	0/1:21,0:22:0.59:1,0,300	0/1:24,0:25:53.58:54,0,205	1/1:28,0:28:2.80:14,3,0	1/1:16,0:16:5.82:76,6,0	0/0:31,0:31:90.03:0,90,2200	1/1:20,0:19:21.81:204,22,0	1/1:13,0:13:38.86:322,39,0	1/1:12,2:16:13.37:188,13,0	1/1:36,3:32:26.06:223,26,0	0/1:16,0:17:35.14:35,0,52	0/1:22,0:20:32.12:32,0,140	0/0:23,0:25:28.99:0,29,213	1/1:21,0:21:12.45:92,12,0	1/1:25,0:25:50.84:401,51,0	1/1:13,7:21:32.77:715,33,0	1/1:3,1:4:6:107,6,0
chr10	43440367	.	TGC	T	4343.42	PASS	AB=0.961;AC=44;AF=0.815;AN=54;BaseQRankSum=4.398;DP=647;FS=4.688;HRun=0;HaplotypeScore=176.2491;InbreedingCoeff=0.1378;MQ=47.21;MQ0=20;MQRankSum=-2.184;QD=7.12;ReadPosRankSum=-0.189;VQSLOD=3.9455;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:32,6:38:23.18:184,23,0	0/1:13,1:14:40.90:41,0,133	0/1:29,0:6:6.90:18,0,7	0/1:28,0:2:0.96:1,0,10	./.	0/1:23,2:25:40.99:41,0,253	0/1:28,3:31:74.59:364,0,75	1/1:26,0:23:40.80:299,41,0	0/1:21,2:22:91.36:91,0,107	1/1:29,0:28:48.63:344,49,0	0/1:27,0:26:0.07:0,0,1	1/1:24,1:25:29.06:281,29,0	1/1:16,6:22:47.06:348,47,0	1/1:24,1:25:46.36:296,46,0	1/1:28,0:28:2.80:14,3,0	1/1:16,0:16:5.85:26,6,0	0/0:32,0:32:12.85:0,13,919	1/1:20,0:19:36.55:256,37,0	1/1:14,0:14:33.34:260,33,0	1/1:16,0:16:13.55:102,14,0	1/1:36,1:31:23.91:190,24,0	0/1:17,0:17:20.36:83,0,20	1/1:21,1:20:18.92:180,19,0	1/1:26,0:25:17.31:149,17,0	1/1:21,0:21:11.79:92,12,0	1/1:25,0:25:62.47:415,62,0	1/1:21,0:21:32.63:224,33,0	1/1:4,0:4:5.98:46,6,0
chr10	43440369	.	CGT	C	389.24	PASS	AB=0.978;AC=20;AF=0.385;AN=52;BaseQRankSum=6.700;DP=654;FS=15.253;HRun=0;HaplotypeScore=190.7694;InbreedingCoeff=0.0450;MQ=46.21;MQ0=21;MQRankSum=-1.049;QD=1.17;ReadPosRankSum=4.936;VQSLOD=1.6059;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:2.02:0,2,12	0/0:14,0:14:6.35:0,6,329	0/0:30,0:4:3:0,3,29	./.	./.	0/0:27,0:27:10.76:0,11,643	0/1:32,0:32:50.27:50,0,298	0/0:25,0:22:9.79:0,10,71	0/0:23,0:22:29.52:0,30,366	0/0:29,0:28:3.71:0,4,43	0/1:27,0:26:0:0,0,1	0/1:24,0:24:30.53:56,0,31	1/1:22,0:22:6.29:77,6,0	1/1:25,0:25:0.91:55,1,0	0/0:28,0:28:0.27:0,0,1	0/1:17,0:17:3.41:3,0,22	0/1:27,6:33:74.66:75,0,630	0/0:20,0:19:4.28:0,4,20	0/0:15,0:15:11.53:0,12,65	0/1:14,0:15:2.52:8,0,3	0/0:39,0:32:5.99:0,6,48	0/1:18,0:18:11.70:12,0,57	0/1:22,0:20:16.78:35,0,17	0/1:28,0:27:28.56:29,0,114	1/1:21,0:21:0.77:3,1,0	0/1:26,0:26:8.33:8,0,11	1/1:17,0:19:24.40:105,24,0	1/1:4,0:4:2.84:14,3,0
chr10	43441429	.	A	AAGGAAAAGC	18350.13	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-7.105;DP=633;FS=1.612;HRun=0;HaplotypeScore=169.8592;InbreedingCoeff=0.9954;MQ=77.73;MQ0=0;MQRankSum=-15.058;QD=90.39;ReadPosRankSum=-0.705;VQSLOD=5.0127;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:18,24:42:81.28:3778,81,0	0/0:8,0:8:21.07:0,21,609	0/0:22,0:23:42.12:0,42,961	0/0:31,0:26:33.59:0,34,754	1/1:8,10:18:30.10:1364,30,0	0/0:26,0:26:72.24:0,72,1991	0/0:22,0:22:66.19:0,66,1751	0/0:34,0:34:84.26:0,84,2148	0/0:27,0:27:69.21:0,69,1791	1/1:15,16:32:69.24:2756,69,0	1/1:9,6:17:36.12:1287,36,0	0/0:20,0:20:54.18:0,54,1568	0/0:18,0:18:51.18:0,51,1480	0/0:27,0:27:72.23:0,72,1951	1/1:8,22:32:78.27:3531,78,0	1/1:8,16:25:48.16:2244,48,0	0/0:19,0:19:48.15:0,48,1332	1/1:2,5:7:15.05:703,15,0	0/0:19,0:19:48.16:0,48,1350	0/0:22,0:22:57.18:0,57,1477	0/0:33,0:32:84.27:0,84,2248	0/0:21,0:21:54.18:0,54,1430	0/0:13,0:13:33.10:0,33,871	0/0:24,0:24:63.19:0,63,1737	1/1:4,6:10:18.06:841,18,0	1/1:6,13:20:45.13:1847,45,0	0/0:25,0:24:66.23:0,66,1818	0/0:18,0:18:54.15:0,54,1420
chr10	43441463	.	CCTGTGGCG	C	260.80	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.853;DP=642;FS=12.106;HRun=0;HaplotypeScore=195.7420;InbreedingCoeff=0.9644;MQ=92.45;MQ0=0;MQRankSum=-3.411;QD=52.16;ReadPosRankSum=2.020;VQSLOD=2.8266;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,114,4906	0/0:8,0:8:24.08:0,24,1110	0/0:28,0:28:80.93:0,81,3211	0/0:30,0:30:84.25:0,84,3806	1/1:0,5:5:15.05:349,15,0	0/0:27,0:27:81.28:0,81,3635	0/0:22,0:22:66.21:0,66,2773	0/0:38,0:38:99:0,114,5097	0/0:28,0:28:84.29:0,84,3683	0/0:29,0:29:84.24:0,84,3365	0/0:13,0:13:33.11:0,33,1499	0/0:20,0:20:60.21:0,60,2675	0/0:23,0:23:69.24:0,69,3089	0/0:25,0:25:75.26:0,75,3430	0/0:35,0:35:93.32:0,93,4124	0/0:21,0:21:63.22:0,63,2778	0/0:21,0:21:63.22:0,63,2707	0/0:5,0:5:15.05:0,15,694	0/0:22,0:22:66.23:0,66,2725	0/0:22,0:22:66.21:0,66,2878	0/0:43,0:43:99:0,129,5589	0/0:23,0:23:69.24:0,69,3162	0/0:18,0:18:54.19:0,54,2395	0/0:22,0:22:63.22:0,63,2783	0/0:12,0:12:27.05:0,27,1130	0/0:23,0:23:66.23:0,66,2960	0/0:24,0:23:72.25:0,72,3016	0/0:9,0:9:27.09:0,27,1133
chr10	43441472	.	AGGAC	A	57.87	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.853;DP=640;FS=12.111;HRun=0;HaplotypeScore=135.7732;InbreedingCoeff=0.9700;MQ=97.87;MQ0=0;MQRankSum=-3.122;QD=11.57;ReadPosRankSum=1.877;VQSLOD=2.5401;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,114,3089	0/0:8,0:8:24.08:0,24,695	0/0:32,0:32:96.33:0,96,2578	0/0:36,0:36:99:0,108,2894	1/1:0,5:5:15.03:146,15,0	0/0:27,0:27:81.28:0,81,2244	0/0:22,0:22:66.21:0,66,1830	0/0:44,0:44:99:0,129,3557	0/0:24,0:24:72.25:0,72,2065	0/0:25,0:25:66.23:0,66,1904	0/0:13,0:13:36.12:0,36,1039	0/0:21,0:21:63.20:0,63,1763	0/0:24,0:24:72.25:0,72,2066	0/0:25,0:25:75.26:0,75,2173	0/0:33,0:33:93.32:0,93,2670	0/0:21,0:21:63.22:0,63,1806	0/0:19,0:19:54.19:0,54,1497	0/0:6,0:6:18.06:0,18,520	0/0:21,0:21:63.22:0,63,1670	0/0:23,0:23:69.24:0,69,1959	0/0:40,0:40:99:0,120,3420	0/0:24,0:24:72.25:0,72,2083	0/0:18,0:18:54.19:0,54,1525	0/0:22,0:22:63.22:0,63,1765	0/0:10,0:10:24.08:0,24,695	0/0:24,0:24:66.23:0,66,1856	0/0:19,0:18:57.14:0,57,1522	0/0:8,0:8:24.03:0,24,566
chr10	43441478	.	TTCTAATAGTCC	T	379.25	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.853;DP=634;FS=15.375;HRun=0;HaplotypeScore=220.2018;InbreedingCoeff=0.9691;MQ=97.37;MQ0=0;MQRankSum=-3.594;QD=75.85;ReadPosRankSum=1.722;VQSLOD=2.3803;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,99,5160	0/0:8,0:8:24.08:0,24,1423	0/0:29,0:29:87.29:0,87,4126	0/0:38,0:38:99:0,114,5674	1/1:0,5:5:15.05:468,15,0	0/0:24,0:24:72.23:0,72,3888	0/0:23,0:23:66.21:0,66,3401	0/0:44,0:44:99:0,126,6797	0/0:25,0:25:75.26:0,75,4095	0/0:23,0:23:66.23:0,66,3649	0/0:13,0:13:36.12:0,36,1892	0/0:21,0:21:63.22:0,63,3700	0/0:24,0:24:72.25:0,72,4105	0/0:27,0:27:81.28:0,81,4673	0/0:33,0:33:90.22:0,90,4421	0/0:21,0:21:63.22:0,63,3592	0/0:18,0:18:51.15:0,51,2742	0/0:8,0:8:21.03:0,21,988	0/0:21,0:21:63.22:0,63,3318	0/0:22,0:22:66.23:0,66,3641	0/0:41,0:41:99:0,123,7151	0/0:24,0:24:72.25:0,72,4095	0/0:17,0:17:51.18:0,51,2803	0/0:25,0:25:72.25:0,72,4153	0/0:9,0:9:27.09:0,27,1556	0/0:24,0:24:69.24:0,69,3812	0/0:18,0:17:54.19:0,54,3199	0/0:6,0:6:18.06:0,18,902
chr10	43441880	.	TGCCC	T	305.44	PASS	AB=0.922;AC=13;AF=0.271;AN=48;BaseQRankSum=2.844;DP=220;FS=2.516;HRun=0;HaplotypeScore=40.1843;InbreedingCoeff=0.3753;MQ=33.82;MQ0=41;MQRankSum=-3.471;QD=5.66;ReadPosRankSum=2.101;VQSLOD=1.4466;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:6,0:3:2.63:86,3,0	0/1:2,0:1:0:0,0,0	0/0:16,0:1:3.01:0,3,54	0/0:13,0:4:6.02:0,6,133	./.	0/0:6,0:4:6.39:0,6,145	0/0:4,0:4:6.02:0,6,135	0/0:7,0:7:12.04:0,12,308	0/1:4,0:2:1.58:2,0,69	0/1:9,4:10:12.89:54,0,13	1/1:3,0:2:0.47:1,0,0	0/0:7,0:6:9.01:0,9,249	0/0:10,0:10:9.03:0,9,259	0/0:6,1:5:9:0,9,194	./.	1/1:3,0:4:5.83:43,6,0	0/0:6,0:4:9.03:0,9,242	1/1:2,2:4:12.04:236,12,0	0/0:22,0:7:5.94:0,6,161	0/0:4,0:3:0:0,0,0	1/1:16,2:14:0.47:1,0,0	0/0:5,0:2:6.02:0,6,174	0/0:7,0:3:3.01:0,3,82	0/0:17,0:14:24.08:0,24,680	0/0:10,0:6:2.02:0,2,6	0/0:11,0:9:4.50:0,4,23	./.	./.
chr10	43441888	.	TGC	T	311.77	PASS	AB=0.812;AC=11;AF=0.220;AN=50;BaseQRankSum=3.743;DP=262;FS=2.334;HRun=0;HaplotypeScore=50.8430;InbreedingCoeff=0.1465;MQ=33.45;MQ0=43;MQRankSum=-4.606;QD=4.16;ReadPosRankSum=-1.655;VQSLOD=1.9824;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:8,1:5:5.86:0,6,89	0/1:2,0:1:0:0,0,0	0/0:21,0:2:0.02:0,0,21	0/0:17,0:5:12.04:0,12,184	./.	0/1:3,4:5:24.85:25,0,110	0/0:8,0:4:6.02:0,6,122	0/0:10,0:9:15.05:0,15,305	0/0:7,0:5:1.53:0,2,81	0/1:11,6:14:99:189,0,182	1/1:2,2:3:1.25:3,1,0	0/0:8,0:7:9.03:0,9,182	0/0:13,0:13:15.05:0,15,304	0/0:7,0:5:9.03:0,9,156	./.	1/1:4,0:4:2.22:7,2,0	0/0:6,0:5:12:0,12,203	0/1:3,0:3:4.49:5,0,4	0/0:24,0:9:4.67:0,5,98	0/0:5,0:4:0:0,0,0	1/1:24,1:19:0.94:2,1,0	0/0:6,0:3:6.02:0,6,122	0/0:6,0:2:3.01:0,3,61	0/0:15,1:13:24.08:0,24,463	0/0:6,5:7:0.40:0,0,1	0/1:7,6:11:37.55:185,0,38	0/0:3,1:3:3.01:0,3,55	./.
chr10	43441902	.	TCTGC	T	176.09	PASS	AB=0.953;AC=10;AF=0.192;AN=52;BaseQRankSum=3.758;DP=308;FS=0.000;HRun=0;HaplotypeScore=66.0860;InbreedingCoeff=-0.0075;MQ=30.77;MQ0=46;MQRankSum=-4.081;QD=1.80;ReadPosRankSum=2.488;VQSLOD=0.6759;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:4:5.90:0,6,129	0/1:2,0:1:0:0,0,0	0/1:26,0:1:0:0,0,0	0/0:20,0:5:8.51:0,9,104	0/0:13,0:12:3.01:0,3,59	0/1:8,0:5:22.94:23,0,83	0/0:10,0:5:6.02:0,6,157	0/0:10,0:8:12.04:0,12,271	0/1:6,1:6:37.30:89,0,37	0/0:26,0:19:13.43:0,13,971	0/0:10,0:8:3.75:0,4,61	0/0:11,0:10:18.04:0,18,427	0/0:14,0:13:18.06:0,18,456	0/0:9,0:7:15.05:0,15,356	./.	0/1:4,2:6:93.51:94,0,176	0/0:8,0:6:18.06:0,18,424	0/1:4,0:4:14.78:15,0,136	0/1:14,0:5:45.04:45,0,93	0/0:2,1:3:0:0,0,0	1/1:25,1:19:0.94:2,1,0	0/0:5,0:3:6.02:0,6,157	0/0:4,0:2:3.01:0,3,79	0/0:20,0:17:20.78:0,21,460	0/0:18,0:13:5.01:0,5,29	0/0:14,0:13:14.76:0,15,632	0/1:5,0:4:23.80:24,0,45	./.
chr10	43441906	.	C	CCT	48.02	PASS	AB=0.956;AC=10;AF=0.192;AN=52;BaseQRankSum=4.920;DP=309;FS=2.288;HRun=0;HaplotypeScore=64.0431;InbreedingCoeff=0.0359;MQ=30.89;MQ0=45;MQRankSum=-4.233;QD=0.48;ReadPosRankSum=0.061;VQSLOD=1.4961;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:4:5.98:0,6,64	0/1:2,0:1:0:0,0,0	1/1:26,0:1:3:26,3,0	0/0:23,0:5:8.37:0,8,70	0/0:12,0:12:3.01:0,3,44	0/1:8,0:5:25.35:25,0,66	0/0:12,0:5:5.72:0,6,88	0/0:9,0:6:12.04:0,12,177	0/1:5,2:6:25.97:79,0,26	0/0:25,0:20:11.30:0,11,609	0/0:9,0:8:3.01:0,3,44	0/0:10,0:10:18.06:0,18,265	0/0:11,0:10:18.06:0,18,265	0/0:9,0:7:15.05:0,15,221	./.	0/1:6,0:6:6.42:6,0,120	0/0:8,0:6:18.06:0,18,265	0/0:5,0:4:8.32:0,8,129	0/0:14,1:5:4.97:0,5,51	0/1:4,0:3:0:0,0,0	0/1:23,2:19:0.11:0,0,0	0/0:5,0:4:9.02:0,9,113	0/0:2,2:2:3.01:0,3,44	0/0:18,3:18:0.34:0,0,304	0/0:16,0:12:0.06:0,0,19	0/1:15,0:15:7.63:8,0,367	0/1:4,0:4:13.04:13,0,38	./.
chr10	43441934	.	T	TCTGC	411.93	PASS	AB=0.979;AC=13;AF=0.250;AN=52;BaseQRankSum=4.662;DP=408;FS=6.944;HRun=0;HaplotypeScore=79.4021;InbreedingCoeff=0.1325;MQ=32.51;MQ0=76;MQRankSum=-4.247;QD=2.30;ReadPosRankSum=0.026;VQSLOD=0.1795;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:12,0:6:34.02:100,0,34	0/0:6,0:5:5.61:0,6,47	0/0:35,0:2:1.72:0,2,3	0/0:31,0:1:0:0,0,0	0/0:14,3:13:3.01:0,3,45	0/1:10,0:6:2.74:3,0,28	0/0:16,0:9:0.89:0,1,102	0/0:8,0:5:0:0,0,0	0/0:9,0:7:0.63:0,1,48	0/1:28,1:19:99:179,0,485	0/1:10,1:9:0.74:1,0,41	0/0:11,0:11:21.07:0,21,378	0/0:14,0:13:21.04:0,21,349	0/0:11,0:9:18:0,18,319	./.	0/0:6,0:6:9.03:0,9,144	0/0:11,0:9:27.09:0,27,491	0/1:7,0:6:57.89:58,0,75	0/1:24,0:6:2:2,0,49	0/1:8,0:5:0:1,0,0	0/1:28,0:20:0.08:0,0,0	0/0:11,0:8:15.05:0,15,254	0/0:10,0:7:12.04:0,12,207	0/0:27,0:24:33.05:0,33,595	1/1:17,3:14:7.25:65,7,0	0/1:20,1:16:88.90:89,0,395	1/1:7,0:5:5.46:37,5,0	./.
chr10	43441940	.	TCTCTGCCTCTGC	T	900.19	PASS	AB=0.946;AC=20;AF=0.400;AN=50;BaseQRankSum=4.270;DP=424;FS=12.749;HRun=0;HaplotypeScore=99.7363;InbreedingCoeff=0.1176;MQ=32.64;MQ0=78;MQRankSum=-5.537;QD=3.74;ReadPosRankSum=-2.743;VQSLOD=0.6666;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:13,0:6:5.24:58,0,5	0/1:4,2:5:12.34:38,0,12	1/1:37,0:3:0.77:2,1,0	0/0:36,0:1:1.55:0,2,4	./.	1/1:10,0:5:3.59:75,4,0	0/1:16,1:9:39.93:40,0,122	0/0:8,0:5:2.96:0,3,19	1/1:9,1:8:9.96:87,10,0	0/1:32,0:19:99:208,0,201	1/1:13,0:11:4.12:48,4,0	0/0:12,0:12:18.85:0,19,774	0/0:15,0:14:23.95:0,24,680	0/0:12,0:11:13.36:0,13,517	./.	0/0:7,0:6:6.01:0,6,66	0/0:13,0:11:33.11:0,33,1554	0/1:6,0:6:16.09:68,0,16	0/1:19,0:5:21.59:22,0,52	0/0:4,4:5:0.89:0,1,2	1/1:26,5:21:0.88:2,1,0	0/0:11,0:8:12.82:0,13,332	0/0:11,0:8:8.35:0,8,322	0/0:27,0:24:30.02:0,30,861	1/1:19,0:13:7.58:52,8,0	0/1:21,0:16:99:190,0,108	0/1:6,1:5:24.11:158,0,24	./.
chr10	43441944	.	TGC	T	655.86	PASS	AB=0.847;AC=18;AF=0.360;AN=50;BaseQRankSum=4.962;DP=420;FS=5.462;HRun=0;HaplotypeScore=75.3165;InbreedingCoeff=0.1744;MQ=32.87;MQ0=77;MQRankSum=-5.683;QD=3.81;ReadPosRankSum=-1.416;VQSLOD=1.6447;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:7,5:6:9.03:146,9,0	0/0:7,0:6:2.79:0,3,19	0/0:38,1:4:2.27:0,2,48	0/0:37,1:1:0.47:0,0,1	./.	1/1:9,1:5:0.67:22,1,0	0/1:11,5:9:39.87:40,0,112	1/1:4,3:4:3.01:41,3,0	0/1:8,2:8:9.70:93,0,10	0/1:26,1:15:99:166,0,154	1/1:10,0:8:1.68:6,2,0	0/0:12,0:12:27.07:0,27,486	0/0:15,1:15:26.98:0,27,483	0/0:12,0:11:24.07:0,24,479	./.	0/0:6,0:5:6.01:0,6,67	0/0:13,1:12:36.12:0,36,705	0/1:6,1:6:15.16:45,0,15	0/0:20,0:5:4.26:0,4,61	0/0:7,0:4:0:0,0,0	1/1:26,1:20:0.47:1,0,0	0/0:12,0:9:18.02:0,18,297	0/0:12,0:8:9.86:0,10,215	0/0:28,0:26:41.98:0,42,791	1/1:17,0:12:2.32:7,2,0	0/1:17,1:15:56.11:156,0,56	0/1:5,2:5:7.88:69,0,8	./.
chr10	43441946	.	CCT	C	466.84	PASS	AB=0.833;AC=15;AF=0.288;AN=52;BaseQRankSum=5.254;DP=418;FS=9.847;HRun=0;HaplotypeScore=78.7454;InbreedingCoeff=0.3288;MQ=32.77;MQ0=75;MQRankSum=-5.528;QD=3.29;ReadPosRankSum=-1.303;VQSLOD=0.9776;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:5:8.48:41,8,0	0/0:7,0:6:2.95:0,3,19	0/0:39,0:4:3.31:0,3,54	0/0:37,0:1:0.47:0,0,1	./.	0/0:10,0:5:1.48:0,1,4	0/0:13,0:7:0.41:0,0,104	0/0:6,0:4:0:0,0,0	0/1:11,0:8:1.59:2,0,51	0/1:17,10:16:99:167,0,116	0/1:5,5:8:0.36:1,0,0	0/0:12,0:12:27.07:0,27,456	0/0:16,0:15:27.09:0,27,475	0/0:12,0:11:24.07:0,24,436	./.	0/0:5,0:4:3.01:0,3,53	0/0:14,0:13:36.12:0,36,674	1/1:5,1:5:6.02:76,6,0	0/0:20,0:5:5.91:0,6,71	0/0:7,0:4:0:0,0,0	1/1:22,0:20:0.47:1,0,0	0/0:12,0:9:15.01:0,15,239	0/0:12,0:8:9.86:0,10,205	0/0:30,0:28:43.66:0,44,744	1/1:14,3:13:4.82:35,5,0	0/1:13,6:14:81.83:240,0,82	0/1:7,0:5:3.16:25,0,3	1/1:4,0:3:3.11:7,3,0
chr10	43441950	.	TGC	T	166.17	PASS	AB=0.974;AC=16;AF=0.308;AN=52;BaseQRankSum=4.839;DP=427;FS=12.262;HRun=0;HaplotypeScore=80.0255;InbreedingCoeff=0.1641;MQ=32.74;MQ0=76;MQRankSum=-5.224;QD=1.14;ReadPosRankSum=-3.303;VQSLOD=-0.4125;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:5:3.17:0,3,11	0/0:7,0:6:2.66:0,3,18	0/0:41,1:4:1.92:0,2,48	0/0:38,0:1:0.47:0,0,1	./.	0/1:9,1:5:11.16:29,0,11	0/0:14,2:9:9.01:0,9,89	0/0:5,1:4:3.01:0,3,33	0/1:14,1:12:24.02:43,0,24	0/1:24,0:13:37.87:38,0,107	1/1:10,0:8:3.79:15,4,0	0/0:12,0:12:27.02:0,27,294	0/0:15,1:15:19.70:0,20,243	0/0:12,0:12:23.96:0,24,231	./.	0/0:4,0:3:2.96:0,3,19	0/0:16,0:15:42.14:0,42,823	1/1:6,0:5:0.09:3,0,0	0/0:23,0:8:1.45:0,1,48	0/1:7,0:4:0:0,0,0	1/1:27,1:19:0.47:1,0,0	0/0:12,0:8:14.93:0,15,137	0/0:12,0:8:6.05:0,6,87	0/0:33,0:30:37.52:0,38,409	1/1:17,0:13:4.55:11,5,0	0/1:18,0:15:71.83:72,0,84	0/1:7,0:5:26.10:60,0,26	1/1:2,2:3:5.54:25,6,0
chr10	43441952	.	C	CCT	2918.29	PASS	AB=0.954;AC=32;AF=0.640;AN=50;BaseQRankSum=-3.098;DP=436;FS=22.558;HRun=0;HaplotypeScore=71.4142;InbreedingCoeff=0.2846;MQ=33.16;MQ0=78;MQRankSum=2.480;QD=10.10;ReadPosRankSum=0.601;VQSLOD=1.3659;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,1:5:1.14:41,1,0	1/1:5,2:6:6.02:83,6,0	0/0:44,0:4:6.46:0,6,53	0/0:36,0:1:0:0,0,0	./.	0/0:11,0:5:5.41:0,5,26	1/1:14,3:10:6.02:103,6,0	0/0:5,0:4:3.01:0,3,36	1/1:11,3:11:11.87:153,12,0	0/1:14,1:13:42.51:99,0,43	1/1:4,1:8:1.71:4,2,0	1/1:3,8:11:21.01:360,21,0	1/1:7,10:16:18.95:404,19,0	1/1:4,11:13:21.06:360,21,0	./.	./.	0/0:17,0:16:45.10:0,45,558	0/1:4,0:4:2.66:17,0,3	0/1:22,1:8:11.01:45,0,11	0/0:7,0:4:0:0,0,0	0/1:25,2:19:0.04:0,0,0	1/1:5,7:8:11.69:205,12,0	1/1:4,8:8:15.05:249,15,0	1/1:5,27:32:45.14:747,45,0	1/1:10,3:13:6.49:17,6,0	0/1:12,0:15:28.67:29,0,63	0/1:5,1:5:36.32:46,0,36	1/1:4,0:3:6.02:101,6,0
chr10	43441958	.	T	TGC	183.64	PASS	AB=0.991;AC=22;AF=0.407;AN=54;BaseQRankSum=1.727;DP=480;FS=4.828;HRun=0;HaplotypeScore=89.5613;InbreedingCoeff=-0.0391;MQ=32.97;MQ0=97;MQRankSum=1.000;QD=0.76;ReadPosRankSum=3.518;VQSLOD=1.2310;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:14,2:10:5.13:113,0,5	1/1:7,0:6:2.84:15,3,0	0/0:43,0:4:6.49:0,6,75	0/0:42,0:1:0:0,0,0	./.	0/1:12,0:6:4.76:5,0,35	0/1:19,0:10:11.39:11,0,95	0/0:9,0:5:6.02:0,6,94	0/1:14,0:10:3.91:21,0,4	0/0:21,1:10:7.06:0,7,150	1/1:13,0:10:2.12:8,2,0	0/1:10,0:10:8.23:8,0,35	0/1:17,0:16:5.91:6,0,35	0/1:16,0:14:15.73:24,0,16	1/1:11,0:7:2.46:7,2,0	0/0:10,0:7:6.02:0,6,71	0/0:20,0:19:57.19:0,57,904	0/0:6,0:5:5.74:0,6,30	0/0:18,0:7:2.29:0,2,9	0/1:10,0:6:0:0,0,0	0/0:33,0:20:9.50:0,10,134	1/1:14,0:8:1.47:5,1,0	0/1:14,0:9:10.35:10,0,22	0/1:36,0:33:33.98:34,0,118	0/1:22,0:16:10.53:31,0,11	0/0:18,0:15:7.60:0,8,150	0/1:6,0:5:18.28:18,0,33	1/1:4,0:3:1.77:3,2,0
chr10	43441960	.	TGC	T	37.69	PASS	AB=0.961;AC=7;AF=0.135;AN=52;BaseQRankSum=4.376;DP=466;FS=0.000;HRun=0;HaplotypeScore=86.3120;InbreedingCoeff=0.0496;MQ=30.72;MQ0=92;MQRankSum=-4.419;QD=0.40;ReadPosRankSum=-1.217;VQSLOD=1.5177;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:10:3.90:0,4,94	0/0:7,0:6:9.02:0,9,106	0/0:41,0:4:7.62:0,8,47	./.	./.	0/1:11,1:6:44.94:45,0,52	0/0:19,2:10:15.04:0,15,206	0/0:8,1:5:6.02:0,6,107	0/1:13,2:10:17.74:18,0,57	0/0:19,0:9:11.96:0,12,139	0/0:13,0:10:0.27:0,0,2	0/0:9,0:9:24.05:0,24,243	0/0:14,3:15:7.03:0,7,208	0/0:15,0:13:8.44:0,8,205	1/1:13,0:8:3.53:10,4,0	0/0:10,0:7:9.03:0,9,110	0/0:21,0:20:60.16:0,60,1100	0/0:5,0:4:2.50:0,3,12	0/0:16,0:7:6.01:0,6,59	0/0:9,0:6:3.01:0,3,50	0/0:29,1:18:7.87:0,8,116	0/0:14,0:8:9.10:0,9,98	0/1:14,0:9:30.75:31,0,126	0/0:33,0:29:23.65:0,24,489	0/1:23,0:15:1.36:1,0,3	0/1:17,0:14:44.45:44,0,143	0/0:5,0:4:10.21:0,10,98	0/0:3,0:3:6.01:0,6,62
chr10	43441998	.	TCTCTGC	T	712.94	PASS	AB=0.913;AC=9;AF=0.180;AN=50;BaseQRankSum=2.855;DP=531;FS=11.162;HRun=0;HaplotypeScore=99.7264;InbreedingCoeff=0.1676;MQ=28.91;MQ0=111;MQRankSum=-3.794;QD=6.60;ReadPosRankSum=-3.531;VQSLOD=-0.1044;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:19:6.14:36,6,0	0/1:6,2:6:99:109,0,99	./.	0/0:59,0:7:16.69:0,17,143	./.	0/1:19,1:11:54.33:54,0,213	0/0:27,1:18:11.17:0,11,477	0/0:19,0:8:18.06:0,18,343	0/0:20,0:15:22.82:0,23,496	0/0:13,0:7:12.03:0,12,169	./.	0/0:8,0:8:15.94:0,16,369	0/0:11,0:11:12.51:0,13,279	0/0:14,0:12:18.13:0,18,207	0/1:14,2:11:85.14:281,0,85	0/1:11,1:8:55.81:56,0,62	0/0:25,0:22:51.17:0,51,1399	0/1:9,0:7:18.34:47,0,18	0/0:16,0:6:9.03:0,9,225	0/0:4,0:4:6.02:0,6,189	0/0:39,1:22:20.77:0,21,365	0/0:9,0:6:5.35:0,5,109	0/0:7,0:5:6.91:0,7,188	0/0:31,0:28:34.81:0,35,837	0/0:22,0:17:0.44:0,0,14	1/1:18,0:15:15.05:267,15,0	0/0:9,0:8:11.17:0,11,206	0/0:3,0:3:6.02:0,6,168
chr10	43442004	.	C	CCT	636.69	PASS	AB=0.822;AC=12;AF=0.222;AN=54;BaseQRankSum=3.316;DP=526;FS=18.440;HRun=0;HaplotypeScore=91.1947;InbreedingCoeff=0.3983;MQ=29.03;MQ0=96;MQRankSum=-3.388;QD=5.35;ReadPosRankSum=-3.487;VQSLOD=0.3634;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:17,3:20:7.22:43,7,0	0/0:8,0:6:12.96:0,13,84	0/0:63,0:1:3.01:0,3,37	0/0:59,0:9:5.99:0,6,186	./.	0/0:19,1:11:15.32:0,15,185	0/0:30,1:20:5.11:0,5,255	0/0:19,0:9:21.07:0,21,294	0/0:23,0:18:27.47:0,27,319	0/0:11,0:7:11.65:0,12,82	1/1:10,0:5:0.23:1,0,0	0/0:7,0:7:15.93:0,16,203	0/1:11,0:11:35.46:35,0,142	0/0:14,0:12:21.84:0,22,231	0/1:12,4:12:11.18:167,0,11	0/1:9,4:9:3.75:116,0,4	0/0:26,0:22:54.16:0,54,755	1/1:6,3:7:3.44:103,3,0	0/0:18,0:6:9.03:0,9,126	0/0:4,0:4:6.02:0,6,84	0/0:38,1:23:20.94:0,21,307	0/0:6,0:4:6.02:0,6,84	0/0:5,0:4:6.91:0,7,85	0/0:29,0:27:34.96:0,35,498	0/1:14,7:16:0.49:49,0,0	1/1:5,9:11:8.23:262,8,0	0/0:10,0:9:12.28:0,12,122	0/0:2,0:2:6.02:0,6,84
chr10	43442006	.	T	TGC	201.26	PASS	AB=0.847;AC=11;AF=0.204;AN=54;BaseQRankSum=4.032;DP=539;FS=13.374;HRun=0;HaplotypeScore=95.0973;InbreedingCoeff=0.3464;MQ=28.83;MQ0=97;MQRankSum=-3.490;QD=1.65;ReadPosRankSum=-1.557;VQSLOD=0.9410;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:20,3:20:8.92:76,0,9	0/0:8,0:6:14.96:0,15,180	0/0:65,0:1:3.01:0,3,47	0/0:60,0:9:13.34:0,13,300	./.	0/0:20,0:11:20.97:0,21,292	0/0:27,0:20:35.50:0,35,469	0/0:19,0:9:24.08:0,24,386	0/0:23,0:19:35.59:0,36,485	0/1:10,3:8:44.67:45,0,61	0/1:5,4:5:0.24:0,0,0	0/0:7,0:7:18.06:0,18,282	0/0:10,0:12:5.13:0,5,206	0/0:15,0:12:23.68:0,24,373	0/1:15,1:14:28.92:29,0,53	0/1:12,2:9:7.65:38,0,8	0/0:26,0:22:63.21:0,63,1003	1/1:7,1:7:8.68:62,9,0	0/0:19,0:6:9.03:0,9,147	0/0:4,0:4:6.02:0,6,98	0/0:42,0:24:20.94:0,21,356	0/0:6,0:4:6.02:0,6,98	0/0:6,0:4:6.91:0,7,100	0/0:29,0:27:37.84:0,38,591	1/1:16,3:16:2.38:7,2,0	1/1:14,0:9:16.38:85,16,0	0/0:10,0:9:12.65:0,13,157	0/0:2,0:2:6.02:0,6,98
chr10	43442020	.	TCTCTCTGC	T	1229.71	PASS	AB=0.956;AC=15;AF=0.313;AN=48;BaseQRankSum=-2.356;DP=546;FS=1.441;HRun=0;HaplotypeScore=124.5806;InbreedingCoeff=0.4140;MQ=29.62;MQ0=90;MQRankSum=-0.489;QD=7.73;ReadPosRankSum=1.354;VQSLOD=2.1229;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:20:16.08:0,16,165	1/1:6,1:6:3.01:76,3,0	0/0:51,0:1:3.01:0,3,40	0/0:52,0:8:3.01:0,3,54	./.	0/0:19,1:12:5.84:0,6,57	0/0:33,0:23:16.25:0,16,234	0/0:19,0:8:5.98:0,6,73	0/0:16,1:21:13.76:0,14,273	0/0:20,0:9:9.39:0,9,130	0/0:12,0:9:5.97:0,6,114	1/1:7,1:6:3.01:76,3,0	1/1:10,0:10:3.01:76,3,0	1/1:10,6:13:21.07:488,21,0	0/0:20,0:18:14.90:0,15,100	0/1:16,0:12:5.79:6,0,43	0/0:28,0:25:45.15:0,45,1473	0/0:11,0:8:11.92:0,12,108	./.	./.	1/1:38,4:27:10.04:264,10,0	0/0:6,1:4:0:0,0,0	0/0:6,0:4:3.01:0,3,61	1/1:21,4:23:11.51:224,12,0	0/1:22,0:15:26.65:27,0,47	0/0:16,0:8:6.02:0,6,95	0/1:11,2:11:82.57:143,0,83	./.
chr10	43442050	.	TGC	T	1167.46	PASS	AB=0.880;AC=11;AF=0.220;AN=50;BaseQRankSum=6.409;DP=507;FS=36.408;HRun=0;HaplotypeScore=97.4550;InbreedingCoeff=-0.1523;MQ=28.49;MQ0=167;MQRankSum=-4.276;QD=5.96;ReadPosRankSum=2.615;VQSLOD=1.5207;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:21,4:15:99:155,0,193	0/0:4,0:4:4.69:0,5,166	./.	0/0:48,1:2:6.02:0,6,88	./.	0/0:13,1:8:18.05:0,18,306	0/0:25,1:21:45.77:0,46,718	0/0:14,1:6:18.06:0,18,325	0/0:15,0:14:25.06:0,25,540	0/1:15,3:7:98.10:131,0,98	0/1:5,2:5:43.05:43,0,55	0/0:5,0:4:1.62:0,2,115	0/0:14,0:10:17.03:0,17,364	0/1:18,0:15:18.38:18,0,173	1/1:8,14:16:30.37:429,30,0	0/1:9,6:12:87.20:269,0,87	0/0:22,0:20:60.19:0,60,1151	0/1:8,3:7:47.45:135,0,47	0/0:36,0:4:3.01:0,3,50	0/0:3,0:1:3.01:0,3,44	0/1:48,0:23:35.70:36,0,49	0/0:10,0:7:9.50:0,10,165	0/0:5,0:2:6.02:0,6,122	0/0:27,0:24:5.86:0,6,273	0/1:20,0:9:39.25:39,0,56	0/0:12,0:4:9.03:0,9,135	0/1:11,1:10:53.92:54,0,186	./.
chr10	43442052	.	CCT	C	278.50	PASS	AB=0.971;AC=9;AF=0.180;AN=50;BaseQRankSum=7.171;DP=502;FS=27.575;HRun=0;HaplotypeScore=100.9574;InbreedingCoeff=-0.0505;MQ=28.45;MQ0=168;MQRankSum=-4.617;QD=1.70;ReadPosRankSum=3.848;VQSLOD=0.2440;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:22,2:14:86.98:87,0,188	0/0:4,0:4:6.45:0,6,162	./.	0/0:47,0:1:3.01:0,3,56	./.	0/0:15,0:9:21.03:0,21,308	0/0:25,0:20:37.38:0,37,690	0/0:14,0:6:18.04:0,18,288	0/0:17,0:15:29.59:0,30,538	0/1:17,1:7:35.77:36,0,76	0/1:6,0:4:7.42:7,0,50	0/0:5,0:4:3.37:0,3,108	0/0:14,0:10:21.97:0,22,411	0/0:18,0:15:4.91:0,5,192	1/1:22,1:16:25.40:155,25,0	0/1:15,0:12:56.66:57,0,88	0/0:21,0:19:57.20:0,57,1052	0/1:11,0:7:18.60:19,0,46	0/0:32,0:3:3.01:0,3,46	0/0:4,0:2:3.01:0,3,46	0/1:48,1:23:20.40:20,0,78	0/0:12,0:8:15.52:0,16,239	0/0:5,0:2:6.02:0,6,112	0/0:25,0:23:26.31:0,26,351	0/1:17,1:8:32.22:32,0,54	0/0:11,0:4:9.03:0,9,167	0/0:13,0:11:10.41:0,10,273	./.
chr10	43442070	.	CCTCT	C	515.01	PASS	AB=0.880;AC=18;AF=0.333;AN=54;BaseQRankSum=5.473;DP=502;FS=17.667;HRun=0;HaplotypeScore=98.7308;InbreedingCoeff=0.1035;MQ=36.06;MQ0=137;MQRankSum=-4.780;QD=2.19;ReadPosRankSum=-1.138;VQSLOD=0.2204;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:22,1:11:12.98:129,13,0	0/0:5,0:5:9.03:0,9,186	0/0:50,0:3:5.95:0,6,87	0/1:56,0:5:6.56:7,0,31	0/1:6,4:6:0:0,0,0	0/1:11,4:12:52.63:53,0,296	0/0:32,0:23:42.07:0,42,1055	0/0:16,1:10:24.08:0,24,576	0/0:17,0:14:20.99:0,21,494	0/1:9,0:5:3.94:4,0,44	1/1:4,0:2:2.50:9,2,0	0/0:7,0:6:15.05:0,15,359	0/1:17,0:13:8.91:9,0,696	0/0:17,0:16:33.06:0,33,686	0/1:12,7:14:56.78:57,0,58	0/1:10,1:9:33.56:45,0,34	0/0:21,1:21:54.18:0,54,1300	0/1:8,1:7:31.94:50,0,32	0/1:25,1:6:42.52:43,0,152	0/0:5,1:5:6.02:0,6,157	0/0:48,1:25:4.41:0,4,109	0/0:11,0:9:16.30:0,16,437	0/0:5,2:4:8.32:0,8,234	0/0:24,2:23:33.88:0,34,821	1/1:10,0:5:8.11:77,8,0	1/1:6,1:4:3.01:53,3,0	0/1:12,4:13:99:136,0,285	./.
chr10	43442090	.	CCT	C	213.36	PASS	AB=0.875;AC=12;AF=0.222;AN=54;BaseQRankSum=5.390;DP=471;FS=11.658;HRun=0;HaplotypeScore=85.8046;InbreedingCoeff=0.2359;MQ=40.78;MQ0=86;MQRankSum=-3.604;QD=2.84;ReadPosRankSum=-0.807;VQSLOD=1.0279;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:13,1:6:31.86:32,0,90	0/0:5,0:4:12.04:0,12,224	0/0:52,0:7:8.22:0,8,109	0/0:52,0:7:12.87:0,13,144	0/1:5,1:3:0:0,0,0	0/1:16,0:12:21.13:21,0,274	0/0:33,0:25:49.25:0,49,762	0/0:18,0:12:27.08:0,27,466	0/0:17,0:12:27.07:0,27,465	0/1:4,1:4:21.78:37,0,22	1/1:2,1:2:3.01:44,3,0	0/0:12,0:11:30.10:0,30,560	0/0:16,0:15:42.14:0,42,786	0/0:24,0:22:45.63:0,46,841	0/1:12,2:10:44.38:44,0,59	0/1:5,3:7:99:114,0,145	0/0:27,0:27:78.25:0,78,1428	0/0:6,0:5:15.05:0,15,255	0/0:18,0:9:18.06:0,18,327	0/0:7,0:5:8.93:0,9,168	0/0:41,0:28:14.70:0,15,210	0/0:12,0:11:21.54:0,22,393	0/0:8,0:5:5.77:0,6,112	0/0:34,0:32:64.46:0,64,1150	1/1:4,0:2:3.01:41,3,0	1/1:3,1:1:2.96:19,3,0	0/0:13,0:9:21.07:0,21,390	./.
chr10	43442108	.	CCTCT	C	272.59	PASS	AB=0.902;AC=14;AF=0.269;AN=52;BaseQRankSum=4.253;DP=412;FS=32.636;HRun=0;HaplotypeScore=79.9081;InbreedingCoeff=0.0347;MQ=39.17;MQ0=55;MQRankSum=-3.674;QD=2.31;ReadPosRankSum=-0.917;VQSLOD=-0.3472;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:16,1:7:25.96:30,0,26	0/1:3,1:3:45.14:45,0,143	0/0:42,0:5:10.88:0,11,141	0/0:44,0:6:11.52:0,12,161	0/1:4,0:3:0:0,0,0	0/1:14,1:11:7.21:7,0,114	0/1:24,2:19:36.43:36,0,485	0/0:19,0:13:32.15:0,32,594	0/1:12,2:12:81.11:81,0,500	0/1:3,1:2:0.99:47,0,1	./.	0/0:15,0:15:42.14:0,42,1070	0/0:18,0:17:39.13:0,39,921	0/0:21,0:19:42.76:0,43,1026	0/1:7,4:9:15.05:49,0,15	1/1:4,0:3:3.01:38,3,0	0/0:29,0:29:75.73:0,76,1857	1/1:3,0:3:3.01:40,3,0	0/1:10,0:7:23.59:24,0,206	0/0:5,0:4:9.03:0,9,197	0/0:35,0:24:14.96:0,15,270	0/0:10,0:9:18.06:0,18,466	0/0:6,0:4:4.12:0,4,144	0/0:30,0:30:69.96:0,70,1720	0/0:3,0:1:1.82:0,2,5	0/1:6,0:3:15.59:16,0,53	0/0:12,0:10:18.45:0,18,337	./.
chr10	43442114	.	T	TGC	111.41	PASS	AB=0.965;AC=10;AF=0.208;AN=48;BaseQRankSum=3.962;DP=357;FS=24.138;HRun=0;HaplotypeScore=56.7670;InbreedingCoeff=0.0668;MQ=39.37;MQ0=34;MQRankSum=-2.728;QD=1.86;ReadPosRankSum=-1.381;VQSLOD=-0.2085;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:8,1:3:8.13:8,0,37	0/1:4,0:3:7.26:7,0,89	0/0:33,0:5:14.85:0,15,148	0/0:35,0:3:8.52:0,9,107	./.	0/0:11,0:7:7.84:0,8,102	0/1:23,0:17:36.53:37,0,315	0/0:17,0:12:32.39:0,32,510	0/0:15,0:14:2.71:0,3,425	0/1:3,0:2:42.50:47,0,43	./.	0/0:17,0:17:48.15:0,48,749	0/0:15,0:14:39.13:0,39,631	0/0:22,0:21:46.87:0,47,732	0/1:7,1:6:35.85:43,0,36	1/1:1,1:1:3.01:38,3,0	0/0:27,0:27:77.84:0,78,1256	1/1:0,1:1:3.01:51,3,0	0/1:10,0:5:8.08:8,0,180	0/0:5,0:4:9.03:0,9,143	0/0:35,0:24:12.27:0,12,230	0/0:8,0:8:18.06:0,18,294	0/0:6,0:5:7.27:0,7,120	0/0:31,0:30:70.48:0,70,1126	./.	0/0:5,0:3:5.53:0,6,94	0/0:10,1:9:21.02:0,21,284	./.
chr10	43442122	.	TCTCTGCCC	T	158.81	PASS	AB=0.940;AC=11;AF=0.306;AN=36;BaseQRankSum=2.605;DP=314;FS=7.729;HRun=0;HaplotypeScore=75.8498;InbreedingCoeff=0.3394;MQ=41.40;MQ0=31;MQRankSum=-2.629;QD=1.91;ReadPosRankSum=-3.329;VQSLOD=-0.0631;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:10,0:4:1.20:18,1,0	./.	./.	./.	./.	0/1:11,0:6:1.42:1,0,15	0/0:20,0:13:11.96:0,12,191	./.	0/0:15,0:14:24.08:0,24,682	./.	./.	0/0:18,0:18:30.06:0,30,757	0/0:12,0:11:12.03:0,12,299	0/0:19,0:18:24.08:0,24,634	1/1:9,0:7:4.56:17,5,0	1/1:2,0:1:2.04:6,2,0	0/0:29,0:29:58.34:0,58,1236	./.	1/1:10,0:3:5.98:50,6,0	0/0:4,0:3:3.01:0,3,50	0/1:28,3:22:6.68:65,0,7	0/0:7,0:7:6.02:0,6,192	0/0:4,0:4:3.01:0,3,87	0/0:31,0:30:45.11:0,45,1215	./.	0/0:5,0:3:2.98:0,3,21	0/1:9,1:8:36.91:116,0,37	./.
chr10	43442136	.	CCCCT	C	264.98	PASS	AB=1.000;AC=8;AF=0.174;AN=46;BaseQRankSum=5.140;DP=274;FS=14.994;HRun=0;HaplotypeScore=59.9225;InbreedingCoeff=0.3970;MQ=44.47;MQ0=21;MQRankSum=-4.681;QD=9.14;ReadPosRankSum=-1.196;VQSLOD=0.4894;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,4:5:8.99:140,9,0	0/0:2,0:2:5.69:0,6,85	0/0:15,0:3:2.96:0,3,19	0/0:21,0:2:3.01:0,3,41	./.	0/1:8,0:4:7.22:7,0,121	0/0:24,0:20:42.14:0,42,952	0/0:9,0:5:12.03:0,12,166	0/0:14,0:13:30.63:0,31,838	./.	./.	0/0:17,0:17:45.15:0,45,1096	0/0:7,0:7:21.07:0,21,506	0/0:15,0:15:40.02:0,40,975	1/1:2,2:4:9.03:175,9,0	1/1:1,1:1:3.01:58,3,0	0/0:30,0:30:87.30:0,87,2142	0/0:1,0:1:2.94:0,3,18	0/0:10,0:3:9.02:0,9,94	0/0:2,0:2:3.01:0,3,84	0/0:28,0:26:41.84:0,42,587	0/0:4,0:4:9.03:0,9,251	0/0:2,0:2:3.01:0,3,84	0/0:36,0:35:87.28:0,87,2107	./.	0/0:5,0:3:5.91:0,6,94	0/1:8,0:7:4.96:5,0,190	./.
chr10	43442152	.	CCCCT	C	532.97	PASS	AB=0.933;AC=11;AF=0.212;AN=52;BaseQRankSum=7.130;DP=309;FS=15.413;HRun=0;HaplotypeScore=67.0901;InbreedingCoeff=0.4787;MQ=45.50;MQ0=25;MQRankSum=-6.186;QD=13.32;ReadPosRankSum=-1.523;VQSLOD=1.4557;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:4,4:7:11.60:157,12,0	0/0:1,0:1:3.01:0,3,73	0/0:12,0:2:3.01:0,3,50	0/0:20,0:3:6.49:0,6,93	0/0:5,0:5:5.99:0,6,65	0/0:9,0:6:15.05:0,15,319	0/0:27,0:24:57.15:0,57,1235	0/0:7,0:5:11.99:0,12,202	0/0:17,0:16:48.12:0,48,1098	1/1:4,0:1:2.96:19,3,0	0/0:3,0:3:5.91:0,6,38	0/0:15,0:15:42.14:0,42,1047	0/0:10,0:10:27.09:0,27,627	0/0:16,0:16:45.15:0,45,1098	1/1:6,2:8:14.91:204,15,0	0/1:6,2:7:3.40:182,0,3	0/0:27,0:27:81.24:0,81,2029	1/1:2,1:2:5.97:75,6,0	0/0:19,0:9:27.08:0,27,459	0/0:4,0:3:6.02:0,6,123	0/0:32,0:28:59.93:0,60,961	0/0:7,0:5:15.05:0,15,373	0/0:5,0:4:9.03:0,9,206	0/0:31,0:29:81.28:0,81,2049	./.	0/1:2,0:2:34.55:35,0,66	0/1:7,0:6:8.11:8,0,85	./.
chr10	43442160	.	CCCCT	C	778.41	PASS	AB=0.763;AC=11;AF=0.212;AN=52;BaseQRankSum=7.474;DP=371;FS=17.572;HRun=0;HaplotypeScore=76.4877;InbreedingCoeff=0.4420;MQ=45.23;MQ0=33;MQRankSum=-6.929;QD=15.57;ReadPosRankSum=-0.487;VQSLOD=1.7459;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:9,2:10:3.33:71,3,0	0/0:1,0:1:3.01:0,3,71	0/0:17,0:2:3.01:0,3,38	0/0:20,0:4:9.50:0,9,146	0/0:9,0:8:6.02:0,6,111	0/0:8,0:6:18.05:0,18,343	0/0:32,0:27:63.14:0,63,1348	0/0:14,0:12:36.07:0,36,679	0/0:19,0:18:45.15:0,45,1088	1/1:4,2:3:6.02:119,6,0	0/0:2,1:3:6.02:0,6,113	0/0:20,0:20:54.19:0,54,1287	0/0:12,0:12:30.10:0,30,696	0/0:19,0:19:54.19:0,54,1288	1/1:5,3:8:14.96:210,15,0	0/1:6,5:9:36.97:288,0,37	0/0:28,0:28:83.50:0,83,2014	1/1:2,1:2:6.02:117,6,0	0/0:25,0:11:30.04:0,30,500	0/0:5,0:4:9.03:0,9,204	0/0:33,0:29:59.83:0,60,907	0/0:8,0:6:18.06:0,18,431	0/0:7,0:5:12.04:0,12,265	0/0:36,0:34:96.33:0,96,2278	./.	0/1:1,2:3:65.07:110,0,65	0/1:8,0:6:8.66:9,0,103	./.
chr10	43442174	.	TGC	T	519.33	PASS	AB=0.939;AC=10;AF=0.192;AN=52;BaseQRankSum=9.717;DP=486;FS=22.388;HRun=0;HaplotypeScore=86.2148;InbreedingCoeff=0.3673;MQ=46.08;MQ0=54;MQRankSum=-9.083;QD=5.30;ReadPosRankSum=-1.270;VQSLOD=0.6242;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,1:13:5.13:87,5,0	0/0:3,0:2:6.02:0,6,115	0/0:27,1:5:1.68:0,2,94	0/1:28,1:6:16.87:17,0,123	0/0:9,2:10:9.01:0,9,160	0/0:10,1:9:23.43:0,23,358	0/0:37,0:32:72.18:0,72,1438	0/0:24,0:19:57.18:0,57,1093	0/0:20,0:18:51.13:0,51,948	0/1:12,1:7:26.12:73,0,26	0/0:3,0:3:6.02:0,6,121	0/0:16,0:16:45.15:0,45,906	0/0:21,0:19:45.13:0,45,848	0/0:22,0:21:54.19:0,54,1090	0/1:10,0:10:38.72:107,0,39	0/1:14,2:14:26.78:222,0,27	0/0:35,0:35:99:0,102,1920	1/1:4,1:4:9.82:67,10,0	0/0:38,0:14:36.10:0,36,664	0/0:7,0:4:12.03:0,12,197	0/0:39,1:35:78.27:0,78,1519	0/0:9,0:7:18.06:0,18,366	0/0:10,0:5:12.04:0,12,243	0/0:34,0:33:90.31:0,90,1780	./.	1/1:7,1:8:18.47:93,18,0	0/0:11,0:9:23.39:0,23,300	./.
chr10	43442176	.	CCT	C	1196.60	PASS	AB=0.760;AC=10;AF=0.192;AN=52;BaseQRankSum=9.692;DP=501;FS=18.117;HRun=0;HaplotypeScore=87.3585;InbreedingCoeff=0.4073;MQ=45.73;MQ0=55;MQRankSum=-8.695;QD=11.62;ReadPosRankSum=-0.263;VQSLOD=1.3978;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,8:15:3.37:113,3,0	0/0:3,0:2:6.02:0,6,112	0/0:33,0:8:17.27:0,17,244	0/1:31,0:6:4.76:5,0,125	0/0:11,0:11:9.01:0,9,162	0/0:11,0:9:21.07:0,21,381	0/0:39,0:34:75.19:0,75,1400	0/0:24,0:20:60.21:0,60,1121	0/0:20,0:18:45.14:0,45,793	0/1:10,4:7:43.74:158,0,44	0/0:2,1:3:6.02:0,6,112	0/0:17,0:17:48.16:0,48,885	0/0:20,0:18:39.13:0,39,730	0/0:23,0:22:57.20:0,57,1044	0/1:4,6:11:37.74:202,0,38	0/1:6,10:14:20:418,0,20	0/0:32,0:32:96.33:0,96,1782	1/1:2,3:4:11.25:138,11,0	0/0:37,0:13:33.11:0,33,617	0/0:7,0:4:12.04:0,12,206	0/0:41,0:35:77.32:0,77,1450	0/0:9,0:7:21.07:0,21,392	0/0:10,0:5:12.04:0,12,225	0/0:36,0:35:93.29:0,93,1705	./.	1/1:1,7:8:21.07:309,21,0	0/0:12,0:10:23.67:0,24,370	./.
chr10	43442202	.	CCTGCCT	C	2321.52	PASS	AB=0.779;AC=6;AF=0.111;AN=54;BaseQRankSum=10.557;DP=613;FS=25.532;HRun=0;HaplotypeScore=144.5462;InbreedingCoeff=-0.1009;MQ=47.91;MQ0=33;MQRankSum=-10.339;QD=17.59;ReadPosRankSum=3.056;VQSLOD=1.6893;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:23,6:23:99:279,0,109	0/0:4,0:3:9.03:0,9,235	0/0:40,0:15:21.77:0,22,759	0/0:32,0:10:23.81:0,24,438	0/0:13,3:14:9.01:0,9,320	0/0:12,0:11:30.03:0,30,840	0/0:40,0:36:96.31:0,96,2713	0/0:21,0:20:59.40:0,59,1409	0/0:34,0:34:80.40:0,80,2546	0/1:16,5:14:99:495,0,255	0/0:7,2:9:12.04:0,12,398	0/0:21,0:21:57.20:0,57,1819	0/0:26,0:24:54.19:0,54,1773	0/0:29,0:27:63.22:0,63,1960	0/1:16,15:27:99:487,0,148	0/1:19,6:23:99:484,0,247	0/0:38,0:39:99:0,103,3505	0/1:8,6:12:99:205,0,200	0/0:17,0:13:36.12:0,36,1070	0/0:4,0:4:12.04:0,12,423	0/0:53,0:48:74.80:0,75,3548	0/0:11,0:9:24.08:0,24,787	0/0:8,0:7:21.07:0,21,713	0/0:39,0:39:99:0,108,3540	0/0:4,3:7:4.26:0,4,100	0/1:10,2:12:8.45:495,0,8	0/0:17,0:15:42.14:0,42,1317	./.
chr10	43442208	.	T	TGC	2520.12	PASS	AB=0.793;AC=6;AF=0.107;AN=56;BaseQRankSum=10.992;DP=648;FS=35.453;HRun=0;HaplotypeScore=114.6765;InbreedingCoeff=-0.1099;MQ=49.41;MQ0=40;MQRankSum=-10.225;QD=18.53;ReadPosRankSum=3.189;VQSLOD=2.0690;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:22,6:22:79.37:283,0,79	0/0:6,0:5:9.03:0,9,144	0/0:42,0:18:24.83:0,25,565	0/0:32,0:13:31.34:0,31,450	0/0:15,2:14:9.03:0,9,147	0/0:13,0:12:30.10:0,30,477	0/0:39,0:35:93.30:0,93,1470	0/0:17,0:16:45.14:0,45,691	0/0:34,0:34:83.57:0,84,1397	0/1:19,6:16:94.61:498,0,95	0/0:8,2:9:12.04:0,12,196	0/0:26,0:26:66.19:0,66,1021	0/0:28,0:25:56.74:0,57,899	0/0:27,0:25:63.20:0,63,994	0/1:24,4:24:95.98:434,0,96	0/1:15,10:23:99:693,0,139	0/0:43,0:43:99:0,115,1844	0/1:12,2:12:79.26:165,0,79	0/0:19,0:13:36.12:0,36,579	0/0:6,0:5:12.04:0,12,196	0/0:61,0:54:99:0,122,1922	0/0:13,0:11:27.09:0,27,437	0/0:8,0:7:21.07:0,21,343	0/0:42,0:42:99:0,108,1743	0/0:6,1:7:4.26:0,4,52	0/1:8,8:15:9.81:570,0,10	0/0:20,0:18:45.15:0,45,721	0/0:2,0:2:6.02:0,6,95
chr10	43442646	.	AT	A	4467.14	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=11.986;DP=381;FS=1.584;HRun=10;HaplotypeScore=61.3793;InbreedingCoeff=0.9571;MQ=76.61;MQ0=0;MQRankSum=1.380;QD=20.31;ReadPosRankSum=-0.159;VQSLOD=5.6610;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,20:21:59.98:521,60,0	0/0:4,0:4:12.02:0,12,124	0/0:12,0:12:23.91:0,24,211	0/0:4,0:4:0:0,0,0	1/1:1,0:14:26.48:78,26,0	0/0:10,0:10:21.06:0,21,232	0/0:13,0:13:33.09:0,33,365	1/1:2,19:21:53.92:460,54,0	0/0:12,0:12:30.08:0,30,332	1/1:1,9:10:23.95:201,24,0	1/1:1,8:9:23.95:201,24,0	0/0:15,0:15:36.10:0,36,398	0/0:6,0:6:12.03:0,12,131	0/0:9,0:10:23.90:0,24,246	1/1:3,9:12:26.99:234,27,0	1/1:2,14:16:41.99:365,42,0	0/0:29,1:30:64.19:0,64,936	1/1:1,22:23:59.98:521,60,0	1/1:5,16:21:17.81:384,18,0	1/1:1,13:14:35.99:313,36,0	1/1:2,5:7:11.99:104,12,0	0/0:17,0:17:45.11:0,45,491	0/0:11,0:11:21.06:0,21,232	0/0:17,0:17:48.09:0,48,505	1/1:1,17:18:20.81:410,21,0	1/1:1,8:9:23.99:208,24,0	1/1:2,13:15:35.98:312,36,0	1/1:2,8:10:17.97:156,18,0
chr10	43443027	.	A	AT	1731.62	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-8.748;DP=477;FS=4.726;HRun=9;HaplotypeScore=74.7936;InbreedingCoeff=0.9391;MQ=66.72;MQ0=2;MQRankSum=2.060;QD=23.40;ReadPosRankSum=0.028;VQSLOD=4.4460;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:71.90:0,72,618	0/0:8,0:8:24:0,24,208	0/0:23,0:14:28.95:0,29,227	0/0:23,0:14:0.99:0,1,143	0/0:20,0:20:56.99:0,57,493	0/0:17,0:17:38.60:0,39,338	0/0:16,0:16:35.98:0,36,313	0/0:29,0:29:59.96:0,60,519	0/0:6,0:6:15:0,15,130	0/0:12,0:12:32.99:0,33,286	0/0:21,0:21:50.98:0,51,442	1/1:4,11:15:25.31:268,25,0	1/1:5,5:10:17.88:180,18,0	1/1:2,10:12:32.58:341,33,0	0/0:11,0:11:15.13:0,15,219	0/0:5,0:5:15:0,15,130	0/0:38,0:38:99:0,105,908	0/0:32,0:32:83.93:0,84,720	0/0:16,0:16:44.97:0,45,387	0/0:6,0:6:18:0,18,156	0/0:9,0:9:17.98:0,18,156	1/1:1,10:11:30.08:332,30,0	1/1:0,11:11:33.09:365,33,0	1/1:1,14:15:39.11:431,39,0	0/0:21,0:21:38.93:0,39,331	0/0:18,0:18:35.72:0,36,402	0/0:24,0:24:68.98:0,69,599	0/0:18,0:17:47.99:0,48,417
chr10	43443333	.	AT	A	3462.82	PASS	AB=0.977;AC=19;AF=0.339;AN=56;BaseQRankSum=11.971;DP=564;FS=3.904;HRun=8;HaplotypeScore=133.6755;InbreedingCoeff=0.9103;MQ=67.93;MQ0=2;MQRankSum=-11.856;QD=13.27;ReadPosRankSum=6.886;VQSLOD=2.1688;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:18,10:27:47.64:430,48,0	0/0:4,0:4:12.04:0,12,145	0/0:42,0:31:19.09:0,19,394	0/1:42,0:23:23.31:23,0,202	1/1:7,14:21:25.89:379,26,0	0/0:12,0:12:18.06:0,18,217	0/0:24,0:24:39.21:0,39,578	0/0:21,0:20:42.13:0,42,507	0/0:13,0:13:24.05:0,24,269	1/1:12,13:25:54.91:431,55,0	1/1:13,11:23:43.53:427,44,0	0/0:17,0:17:31.90:0,32,356	0/0:15,0:15:36.06:0,36,408	0/0:14,0:14:30.07:0,30,340	1/1:10,10:21:40.80:333,41,0	1/1:16,11:27:39.37:403,39,0	0/0:23,0:23:60.13:0,60,693	1/1:9,7:15:17.35:132,17,0	0/0:19,0:19:54.13:0,54,627	0/0:15,0:15:39.12:0,39,471	0/0:9,0:9:24.07:0,24,290	0/0:7,0:7:21.06:0,21,254	0/0:13,0:13:36.10:0,36,424	0/0:19,0:19:33.09:0,33,394	1/1:23,12:35:78.44:583,78,0	1/1:11,10:20:42.31:321,42,0	0/0:24,0:23:66.17:0,66,764	0/0:10,0:10:21.05:0,21,242
chr10	43443337	.	T	TTTTG	6044.01	PASS	AB=0.895;AC=16;AF=0.286;AN=56;BaseQRankSum=4.065;DP=601;FS=63.898;HRun=0;HaplotypeScore=173.1986;InbreedingCoeff=0.6609;MQ=67.59;MQ0=4;MQRankSum=-9.465;QD=21.51;ReadPosRankSum=3.593;VQSLOD=2.3704;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:20,7:26:48.15:747,48,0	0/0:5,0:5:15.04:0,15,242	0/0:46,0:30:39.82:0,40,718	0/1:52,0:27:34.96:35,0,290	0/1:22,0:21:7.08:123,0,7	0/0:15,0:15:27.06:0,27,387	0/0:24,0:24:60.08:0,60,893	0/0:19,0:18:48.11:0,48,754	0/0:14,0:14:27.07:0,27,403	1/1:21,8:29:43.05:844,43,0	0/1:23,7:28:2.62:707,0,3	0/0:17,0:17:39.03:0,39,575	0/0:15,0:15:42.05:0,42,624	0/0:14,0:14:30.06:0,30,464	1/1:16,7:23:2.05:661,2,0	1/1:19,7:25:16.47:576,16,0	0/0:24,0:24:72.14:0,72,1082	1/1:10,5:14:29.55:546,30,0	0/0:21,0:21:60.16:0,60,962	0/0:15,0:15:42.14:0,42,733	0/0:11,0:11:33.06:0,33,490	0/0:9,0:9:27.08:0,27,436	0/0:16,0:16:38.86:0,39,595	0/0:20,0:20:44.61:0,45,643	1/1:21,13:34:33.91:1309,34,0	0/1:16,6:21:14.65:496,0,15	0/0:24,0:23:69.19:0,69,1118	0/0:10,0:10:21.06:0,21,352
chr10	43443341	.	TG	T	884.84	PASS	AB=0.985;AC=17;AF=0.304;AN=56;BaseQRankSum=9.094;DP=604;FS=3.858;HRun=1;HaplotypeScore=141.4585;InbreedingCoeff=0.0216;MQ=67.34;MQ0=4;MQRankSum=-7.585;QD=2.59;ReadPosRankSum=1.711;VQSLOD=-0.1348;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:24:33.56:125,34,0	0/1:5,0:5:6.89:7,0,144	0/0:52,0:30:31.86:0,32,492	0/1:53,1:26:61.20:61,0,120	1/1:21,1:21:11.70:154,12,0	0/0:14,0:14:26.12:0,26,268	0/1:23,1:24:18.43:18,0,526	0/0:17,0:17:25.98:0,26,528	0/0:16,0:16:25.71:0,26,250	0/1:29,0:29:58.82:62,0,59	0/1:29,1:28:25.19:163,0,25	0/1:17,0:17:13.31:13,0,314	0/1:15,0:15:0.62:1,0,362	0/0:13,0:13:27.90:0,28,311	0/1:23,0:23:69.32:89,0,69	1/1:26,1:26:2.39:99,2,0	0/0:24,0:24:37.08:0,37,703	0/1:14,0:13:13.86:16,0,14	0/0:21,0:21:60.18:0,60,764	0/0:17,0:17:44.86:0,45,548	0/0:11,0:11:8.91:0,9,304	0/0:9,0:9:5.13:0,5,273	0/0:17,0:17:3.14:0,3,387	0/0:20,0:20:9.61:0,10,349	0/1:32,1:33:33.79:181,0,34	0/1:22,1:22:28.43:59,0,28	0/0:24,0:23:68.88:0,69,827	0/0:7,0:7:21.07:0,21,275
chr10	43443354	.	C	CTT	1682.25	PASS	AB=0.782;AC=35;AF=0.625;AN=56;BaseQRankSum=3.783;DP=602;FS=1.350;HRun=17;HaplotypeScore=151.8124;InbreedingCoeff=0.3118;MQ=61.85;MQ0=5;MQRankSum=-4.996;QD=3.71;ReadPosRankSum=-1.291;VQSLOD=-0.3645;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:15:13.88:88,14,0	1/1:2,0:5:7.11:25,7,0	0/1:66,0:29:26.26:26,0,64	0/0:61,0:27:13.07:0,13,75	1/1:21,0:20:20.76:148,21,0	1/1:3,1:17:12.49:70,12,0	0/1:11,7:23:2.22:141,0,2	0/1:18,0:17:55.88:56,0,63	1/1:5,9:18:2.08:63,2,0	1/1:34,0:33:39.53:274,40,0	1/1:26,0:24:20.04:137,20,0	0/1:7,0:14:16.01:16,0,46	0/1:13,0:13:15.60:84,0,16	0/1:8,0:15:0.64:1,0,34	1/1:20,0:20:16.81:118,17,0	1/1:20,0:19:16.51:88,17,0	0/0:23,0:23:1.28:0,1,124	1/1:9,0:8:3.49:31,3,0	0/1:15,0:17:1.36:1,0,25	0/0:16,0:17:14.33:0,14,100	0/0:6,0:10:19.26:0,19,106	1/1:6,1:14:18.12:112,18,0	0/1:4,11:17:19.51:110,0,20	0/1:6,0:16:5.73:35,0,6	1/1:27,0:27:31.76:165,32,0	1/1:22,0:21:11.14:72,11,0	0/0:21,0:23:21.39:0,21,148	0/0:10,0:11:10.97:0,11,74
chr10	43443364	.	T	TGATGA	1362.33	PASS	AB=0.857;AC=8;AF=0.143;AN=56;BaseQRankSum=8.058;DP=590;FS=14.296;HRun=0;HaplotypeScore=168.6262;InbreedingCoeff=-0.1687;MQ=62.15;MQ0=9;MQRankSum=-4.164;QD=8.21;ReadPosRankSum=1.163;VQSLOD=2.1012;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:11,4:14:99:101,0,407	0/0:4,0:4:12.04:0,12,259	0/0:79,0:33:57.45:0,57,1146	0/0:71,0:30:45.42:0,45,598	0/0:18,0:17:44.47:0,44,784	0/0:18,0:18:27.09:0,27,589	0/0:16,0:16:36.12:0,36,731	0/0:16,0:15:42.13:0,42,862	0/0:19,0:19:27.08:0,27,529	0/1:27,4:30:99:255,0,1236	0/1:22,3:23:99:160,0,967	0/0:14,0:14:27.09:0,27,562	0/0:11,0:11:24.08:0,24,496	0/0:13,0:13:21.07:0,21,452	0/1:15,4:19:99:276,0,746	0/1:19,0:18:99:102,0,706	0/0:25,0:25:72.20:0,72,1564	0/1:5,3:8:86.25:86,0,290	0/0:14,0:14:39.13:0,39,788	0/0:13,0:13:36.12:0,36,773	0/0:10,0:10:30.10:0,30,621	0/0:12,0:11:30.10:0,30,636	0/0:19,0:19:38.31:0,38,857	0/0:15,0:15:23.11:0,23,405	0/1:21,6:27:99:338,0,1136	0/1:20,2:21:99:181,0,748	0/0:24,0:23:69.23:0,69,1476	0/0:11,0:11:33.11:0,33,736
chr10	43443382	.	G	GGGTTGGTT	5835.77	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-0.390;DP=437;FS=5.928;HRun=0;HaplotypeScore=129.6769;InbreedingCoeff=0.8843;MQ=57.91;MQ0=7;MQRankSum=-10.386;QD=55.05;ReadPosRankSum=-0.406;VQSLOD=4.4647;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,8:16:36.03:1164,36,0	0/0:7,0:7:12.03:0,12,257	0/0:51,0:23:0.75:0,1,363	0/0:56,0:30:45.92:0,46,924	1/1:7,0:18:38.93:330,39,0	0/0:12,0:12:12.04:0,12,279	0/0:17,0:17:33.04:0,33,690	0/0:21,0:20:48.15:0,48,1064	0/0:11,0:11:24.07:0,24,541	1/1:8,7:15:27:916,27,0	1/1:6,5:12:18.02:570,18,0	0/0:12,0:12:30.03:0,30,662	0/0:10,0:10:27.04:0,27,587	0/0:8,0:8:12.01:0,12,180	1/1:4,3:8:0.06:364,0,0	1/1:3,9:12:21.03:760,21,0	0/0:16,0:16:27.06:0,27,641	1/1:4,0:4:5.97:144,6,0	0/0:11,0:11:21:0,21,282	0/0:9,0:9:21.07:0,21,543	0/0:15,0:15:39.08:0,39,838	0/0:15,0:15:33.03:0,33,740	0/0:14,0:14:30.07:0,30,774	0/0:14,0:14:27.04:0,27,507	1/1:6,5:12:24.03:843,24,0	1/1:2,5:8:18.06:744,18,0	0/0:20,0:20:51.16:0,51,1237	0/0:11,0:11:24.08:0,24,620
chr10	43444152	.	C	CT	11568.01	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-16.832;DP=683;FS=0.593;HRun=3;HaplotypeScore=60.5213;InbreedingCoeff=0.9956;MQ=86.58;MQ0=0;MQRankSum=-1.833;QD=37.93;ReadPosRankSum=3.331;VQSLOD=5.1910;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,48:52:99:1764,126,0	1/1:0,10:10:27.09:378,27,0	0/0:20,0:20:57.16:0,57,670	0/0:25,0:25:58.32:0,58,625	1/1:1,30:31:81.27:1134,81,0	1/1:1,15:16:45.15:630,45,0	1/1:1,27:28:72.24:1008,72,0	0/0:32,0:32:90.28:0,90,1080	1/1:1,26:27:72.24:1008,72,0	1/1:2,30:32:90.27:1234,90,0	1/1:0,11:11:33.11:462,33,0	0/0:24,0:24:60.18:0,60,720	0/0:17,0:17:51.16:0,51,612	0/0:29,0:29:84.26:0,84,1008	1/1:0,16:16:48.16:672,48,0	1/1:0,29:29:78.26:1093,78,0	0/0:38,0:38:99:0,111,1332	1/1:0,15:15:45.15:630,45,0	0/0:22,0:22:60.16:0,60,706	0/0:19,0:19:57.16:0,57,673	0/0:43,0:43:99:0,126,1511	0/0:20,0:20:51.16:0,51,611	0/0:16,0:16:42.13:0,42,504	0/0:37,1:38:63.29:0,63,1169	1/1:1,18:19:54.18:756,54,0	1/1:0,19:19:57.19:798,57,0	0/0:31,0:31:93.29:0,93,1115	0/0:4,0:4:12.04:0,12,144
chr10	43444561	.	C	CA	3721.86	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=6.314;DP=344;FS=45.374;HRun=0;HaplotypeScore=58.3665;InbreedingCoeff=0.8203;MQ=76.84;MQ0=0;MQRankSum=1.211;QD=24.98;ReadPosRankSum=11.849;VQSLOD=0.4180;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,31:35:42.98:772,43,0	0/0:4,0:4:2.97:0,3,20	0/0:13,0:13:29.79:0,30,274	0/0:11,0:10:18.89:0,19,164	0/0:8,0:8:14.96:0,15,123	0/0:8,0:8:12.88:0,13,107	0/0:16,0:16:35.02:0,35,264	0/0:5,0:5:3:0,3,26	0/0:16,0:16:32.19:0,32,240	1/1:3,17:20:47.17:504,47,0	1/1:2,12:15:12.27:277,12,0	0/0:8,0:8:14.91:0,15,114	0/0:3,0:3:8.88:0,9,63	0/0:5,0:5:10.91:0,11,65	1/1:0,9:9:24.07:276,24,0	1/1:0,7:7:15.03:173,15,0	0/0:30,0:30:65.78:0,66,546	1/1:0,23:23:57.15:636,57,0	0/0:12,0:12:35.18:0,35,293	0/0:4,0:4:9.88:0,10,80	0/0:29,0:29:41.70:0,42,326	0/0:4,0:4:6:0,6,52	0/0:4,0:4:3.89:0,4,29	0/0:3,0:3:5.92:0,6,39	1/1:0,10:10:27.08:317,27,0	1/1:3,27:30:67.93:765,68,0	0/0:10,0:10:26.58:0,27,196	0/0:2,0:2:3:0,3,25
chr10	43444566	.	C	CG	92.11	PASS	AB=0.846;AC=8;AF=0.148;AN=54;BaseQRankSum=-0.186;DP=392;FS=0.993;HRun=0;HaplotypeScore=104.3471;InbreedingCoeff=0.4640;MQ=75.24;MQ0=0;MQRankSum=-0.044;QD=2.97;ReadPosRankSum=-1.668;VQSLOD=3.0946;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:92.13:0,92,550	./.	0/0:14,0:14:0.80:0,1,93	0/0:11,0:10:7.43:0,7,73	0/0:9,0:9:8.73:0,9,61	0/0:10,0:10:6.45:0,6,49	0/0:24,0:24:25.44:0,25,192	0/0:8,0:8:6.01:0,6,55	0/0:20,0:20:21.59:0,22,161	0/0:20,0:20:33.97:0,34,348	0/0:15,0:15:29.60:0,30,186	0/1:5,4:9:14.24:14,0,33	0/1:7,0:7:0.25:72,0,0	1/1:8,0:8:0.03:35,0,0	0/0:8,0:8:22.80:0,23,118	0/0:7,0:7:17.51:0,18,108	0/0:36,0:36:41.92:0,42,343	0/0:27,0:27:63.32:0,63,352	0/0:12,0:12:29.12:0,29,228	0/0:6,0:6:5.88:0,6,50	0/0:29,0:29:27.71:0,28,210	1/1:3,0:3:5.95:42,6,0	1/1:4,0:4:8.81:55,9,0	0/0:6,0:6:4.18:0,4,13	0/0:10,0:10:25.88:0,26,140	0/0:30,0:30:85.88:0,86,591	0/0:11,0:11:23.41:0,23,174	0/0:7,0:7:3:0,3,26
chr10	43444973	.	TA	T	456.09	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.815;DP=614;FS=0.894;HRun=7;HaplotypeScore=101.3159;InbreedingCoeff=0.9446;MQ=85.05;MQ0=0;MQRankSum=-0.131;QD=19.83;ReadPosRankSum=1.217;VQSLOD=2.8466;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:87.27:0,87,1079	0/0:3,0:3:9.03:0,9,113	0/0:19,0:19:45.14:0,45,565	0/0:21,0:21:39.12:0,39,475	1/1:3,20:23:54.12:551,54,0	0/0:25,0:25:66.21:0,66,830	0/0:25,0:25:72.23:0,72,906	0/0:31,0:31:78.24:0,78,969	0/0:17,0:17:48.14:0,48,591	0/0:24,0:24:66.21:0,66,830	0/0:18,0:18:42.13:0,42,523	0/0:25,0:25:60.18:0,60,742	0/0:24,0:24:60.15:0,60,737	0/0:20,0:20:57.18:0,57,716	0/0:13,0:13:36.12:0,36,452	0/0:19,0:19:51.16:0,51,631	0/0:31,0:31:81.26:0,81,1019	0/0:18,0:18:51.16:0,51,641	0/0:21,0:21:57.18:0,57,717	0/0:17,0:17:51.16:0,51,641	0/0:50,0:50:99:0,132,1660	0/0:19,0:19:51.16:0,51,635	0/0:18,0:18:48.15:0,48,604	0/0:19,0:19:57.17:0,57,698	0/0:21,0:21:54.63:0,55,668	0/0:30,0:30:84.27:0,84,1055	0/0:21,0:21:57.18:0,57,717	0/0:13,0:13:30.10:0,30,377
chr10	43445539	.	G	GGGTTT	2155.98	PASS	AB=1.000;AC=23;AF=0.426;AN=54;BaseQRankSum=-7.508;DP=741;FS=3.897;HRun=0;HaplotypeScore=176.9974;InbreedingCoeff=0.3331;MQ=65.23;MQ0=18;MQRankSum=-2.156;QD=5.84;ReadPosRankSum=1.760;VQSLOD=2.5481;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:36,0:36:67.90:68,0,257	0/0:14,0:14:21.02:0,21,222	./.	0/0:73,0:34:1.25:0,1,3	0/0:26,0:26:17.97:0,18,188	0/0:30,0:30:24.02:0,24,251	0/0:23,0:23:5.98:0,6,46	1/1:29,0:28:2.03:4,2,0	0/0:15,0:15:18.04:0,18,195	0/1:26,0:26:23.93:24,0,197	0/1:28,0:28:45.44:45,0,183	1/1:9,8:18:20.92:523,21,0	1/1:14,10:24:15.52:413,16,0	1/1:17,6:24:9.03:241,9,0	0/0:29,0:29:16.13:0,16,440	0/1:15,0:15:30.94:31,0,96	0/0:26,0:27:39.11:0,39,632	0/1:34,0:34:12.72:13,0,468	0/0:25,0:24:9.02:0,9,98	0/0:14,0:14:9.03:0,9,105	1/1:18,0:18:1.25:3,1,0	1/1:12,8:21:11.96:229,12,0	1/1:19,7:25:21.54:440,22,0	1/1:21,0:21:14.96:213,15,0	0/1:23,0:23:18.62:19,0,223	0/1:25,0:25:68.89:69,0,140	0/0:33,0:32:23.49:0,23,254	0/0:11,0:11:9.03:0,9,105
chr10	43445576	.	GTTTGGTTTGA	G	7081.63	PASS	AB=0.998;AC=35;AF=0.625;AN=56;BaseQRankSum=-9.403;DP=708;FS=10.585;HRun=0;HaplotypeScore=210.0729;InbreedingCoeff=-0.1724;MQ=65.21;MQ0=14;MQRankSum=0.274;QD=12.38;ReadPosRankSum=-4.542;VQSLOD=1.5250;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:34:99:167,0,1381	1/1:1,16:17:35.35:775,35,0	0/0:42,0:21:40.93:0,41,420	0/0:66,0:29:46.02:0,46,468	0/1:23,0:23:97.40:97,0,192	1/1:3,18:21:23.21:777,23,0	1/1:1,16:17:6.02:195,6,0	1/1:17,7:23:62.92:617,63,0	1/1:0,18:18:18.06:584,18,0	0/1:27,0:27:99:218,0,863	0/1:26,0:26:41.78:42,0,1277	0/1:16,0:16:65.88:66,0,630	0/1:22,0:21:80.42:80,0,546	0/1:16,0:16:84.96:85,0,265	0/1:29,0:29:99:125,0,1529	0/1:21,0:21:99:174,0,574	0/0:28,0:28:81.09:0,81,2497	0/1:40,0:40:99:136,0,2126	1/1:9,15:17:44.86:580,45,0	1/1:2,13:15:35.66:498,36,0	1/1:3,15:18:5.97:112,6,0	0/1:28,0:27:99:143,0,455	0/1:26,0:26:99:133,0,590	0/1:21,0:21:99:185,0,280	0/1:18,0:18:43.01:43,0,1004	0/1:28,0:28:99:185,0,868	1/1:0,33:32:21.71:775,22,0	1/1:0,10:10:9.03:292,9,0
chr10	43445581	.	GTTTGA	G	5927.98	PASS	AB=1.000;AC=36;AF=0.643;AN=56;BaseQRankSum=-5.714;DP=678;FS=7.836;HRun=0;HaplotypeScore=158.4260;InbreedingCoeff=-0.1179;MQ=65.73;MQ0=13;MQRankSum=0.298;QD=10.64;ReadPosRankSum=-3.045;VQSLOD=2.2977;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:37,0:37:99:266,0,417	1/1:16,0:16:35.85:401,36,0	0/0:35,0:19:40.16:0,40,418	0/0:56,0:30:51.01:0,51,534	1/1:1,24:25:41.37:418,41,0	1/1:19,0:19:24.08:350,24,0	1/1:16,0:16:6.02:87,6,0	1/1:26,0:25:70.09:579,70,0	1/1:18,0:18:18.06:262,18,0	0/1:27,0:27:99:297,0,226	0/1:24,0:24:99:105,0,385	0/1:16,0:16:65.43:65,0,309	0/1:21,0:20:99:123,0,219	0/1:16,0:16:61.48:115,0,61	0/1:27,0:27:99:203,0,528	0/1:20,0:20:99:213,0,117	0/0:29,0:29:53.21:0,53,1440	0/1:39,0:39:99:285,0,636	1/1:21,0:15:38.94:380,39,0	1/1:13,0:13:35.57:298,36,0	1/1:15,0:15:5.97:58,6,0	0/1:28,0:27:99:218,0,135	0/1:24,0:24:99:201,0,177	0/1:23,0:23:48.28:234,0,48	0/1:18,0:18:71.88:72,0,374	0/1:25,0:25:99:220,0,210	1/1:33,0:32:22.07:347,22,0	1/1:10,0:10:9.03:131,9,0
chr10	43445931	.	TAAA	T	1554.48	PASS	AB=1.000;AC=13;AF=0.325;AN=40;BaseQRankSum=0.970;DP=307;FS=10.096;HRun=16;HaplotypeScore=67.8677;InbreedingCoeff=0.8996;MQ=64.89;MQ0=3;MQRankSum=-1.712;QD=15.09;ReadPosRankSum=1.367;VQSLOD=1.5374;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	0/0:11,0:12:30.10:0,30,522	0/0:17,0:12:11.44:0,11,284	0/0:9,0:6:13.83:0,14,142	./.	0/0:16,0:19:33.11:0,33,552	0/0:17,0:23:58.38:0,58,863	1/1:5,16:22:41.73:437,42,0	0/0:10,0:11:22.27:0,22,270	./.	0/1:5,0:5:0:0,0,0	0/0:3,0:11:25.16:0,25,215	0/0:3,0:11:11.95:0,12,91	0/0:7,0:16:22.18:0,22,165	./.	./.	0/0:23,0:22:51.15:0,51,810	./.	1/1:9,12:21:32.67:340,33,0	1/1:3,10:14:29.85:292,30,0	1/1:5,15:21:32.90:355,33,0	0/0:6,0:11:19.13:0,19,162	0/0:5,0:16:25.97:0,26,228	0/0:11,0:20:23.95:0,24,244	./.	./.	1/1:2,11:13:24.01:257,24,0	1/1:1,5:6:2.99:32,3,0
chr10	43446031	.	C	CTTTCTTTT	5227.28	PASS	AB=1.000;AC=33;AF=0.589;AN=56;BaseQRankSum=2.292;DP=469;FS=17.390;HRun=0;HaplotypeScore=153.3571;InbreedingCoeff=0.0901;MQ=59.09;MQ0=14;MQRankSum=-7.016;QD=12.97;ReadPosRankSum=-6.259;VQSLOD=0.2774;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:28:40.53:41,0,197	1/1:7,0:7:16.79:260,17,0	0/1:35,0:10:0.64:1,0,67	0/0:24,0:12:9.69:0,10,39	0/1:27,0:27:20.34:20,0,162	1/1:22,0:22:59.80:664,60,0	1/1:7,6:18:6.46:217,6,0	1/1:32,0:31:74.80:793,75,0	1/1:15,0:15:34.47:376,34,0	0/1:13,0:11:52.46:84,0,52	0/1:18,0:17:99:115,0,126	0/0:7,0:7:7.91:0,8,60	0/0:10,0:10:1.16:0,1,118	0/1:15,0:15:22.34:23,0,22	0/0:2,0:2:5.97:0,6,48	1/1:5,0:4:2.99:81,3,0	0/1:19,0:18:44.49:44,0,88	0/1:14,0:12:38.05:360,0,38	1/1:22,0:21:47.17:390,47,0	1/1:21,0:21:49.75:461,50,0	1/1:8,0:8:11.86:89,12,0	0/0:11,0:11:10.66:0,11,89	0/1:13,0:13:16.85:17,0,76	0/0:11,0:11:4.46:0,4,51	0/1:15,0:13:61.24:225,0,61	0/1:20,0:16:89.36:314,0,89	1/1:16,0:15:37.54:333,38,0	1/1:20,0:19:35.66:319,36,0
chr10	43446034	.	T	TC	1202.04	PASS	AB=0.960;AC=13;AF=0.232;AN=56;BaseQRankSum=-1.446;DP=462;FS=2.841;HRun=0;HaplotypeScore=74.3172;InbreedingCoeff=-0.0829;MQ=55.22;MQ0=16;MQRankSum=-0.596;QD=5.39;ReadPosRankSum=4.031;VQSLOD=3.3878;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:67.57:0,68,493	0/1:8,1:9:4.54:62,0,5	0/1:33,0:8:2.71:3,0,63	0/0:23,0:11:11.01:0,11,81	0/0:28,0:28:60.68:0,61,430	0/1:21,1:22:67.87:195,0,68	0/1:13,0:13:23.74:24,0,32	0/1:20,9:28:35.86:330,0,36	0/1:14,0:14:31.50:141,0,31	0/0:11,0:9:23.49:0,23,155	0/0:17,0:16:40.25:0,40,278	0/0:11,0:11:12.48:0,12,112	0/0:10,0:10:26.18:0,26,211	0/0:13,0:13:22.91:0,23,183	0/0:2,0:2:3:0,3,28	0/0:4,0:3:8.91:0,9,60	0/0:20,0:19:34.15:0,34,264	0/0:14,0:12:26.43:0,26,165	0/1:22,0:21:49.89:230,0,50	0/1:19,0:19:39.18:171,0,39	1/1:7,0:7:9.99:86,10,0	0/0:10,0:10:14.45:0,14,109	0/1:16,0:16:9.29:9,0,98	0/0:15,0:13:16.67:0,17,149	0/0:15,0:13:28.63:0,29,200	0/0:18,0:14:38.95:0,39,267	0/1:17,0:16:70.16:70,0,79	0/1:20,1:19:32.98:33,0,108
chr10	43446043	.	T	TC	259.43	PASS	AB=0.903;AC=9;AF=0.161;AN=56;BaseQRankSum=0.203;DP=445;FS=11.192;HRun=0;HaplotypeScore=66.1187;InbreedingCoeff=-0.1984;MQ=57.19;MQ0=17;MQRankSum=1.240;QD=1.62;ReadPosRankSum=-0.749;VQSLOD=0.6850;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:79.87:0,80,620	0/1:3,0:9:3.95:4,0,36	0/0:35,0:7:5:0,5,43	0/0:24,0:11:19.63:0,20,133	0/0:25,0:25:67.96:0,68,532	0/1:21,0:22:43.67:44,0,198	0/1:13,0:14:30.25:32,0,30	0/1:26,0:24:4.88:5,0,348	0/1:14,0:14:49.40:49,0,137	0/0:10,0:8:23.67:0,24,171	0/0:13,0:12:31.89:0,32,220	0/0:11,0:11:26.93:0,27,225	0/0:10,0:10:29.83:0,30,233	0/0:14,0:14:38.07:0,38,295	0/0:1,0:1:2.98:0,3,21	0/0:4,0:3:8.93:0,9,64	0/0:22,0:21:48.30:0,48,396	0/0:14,0:12:26.18:0,26,177	0/1:12,7:17:86.14:86,0,139	0/1:19,0:19:28.15:28,0,207	0/0:6,0:6:8.53:0,9,54	0/0:8,0:8:17.82:0,18,129	0/0:17,0:17:41.32:0,41,332	0/0:17,0:15:28.94:0,29,258	0/0:12,0:10:20.72:0,21,141	0/0:15,0:11:32.24:0,32,215	0/1:18,0:17:54.22:54,0,130	0/1:17,0:17:83.51:90,0,84
chr10	43446134	.	C	CA	5222.99	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-9.929;DP=492;FS=10.813;HRun=1;HaplotypeScore=56.8677;InbreedingCoeff=0.9980;MQ=76.42;MQ0=0;MQRankSum=-1.087;QD=38.40;ReadPosRankSum=1.710;VQSLOD=4.7392;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,16:17:45.15:658,45,0	0/0:11,0:11:30.10:0,30,387	0/0:24,0:23:67.27:0,67,716	0/0:11,0:11:27:0,27,302	1/1:0,10:10:27.05:378,27,0	0/0:18,0:18:51.15:0,51,643	0/0:22,0:22:63.20:0,63,816	0/0:22,0:22:60.03:0,60,699	0/0:26,0:26:75.22:0,75,954	1/1:1,14:15:42.12:604,42,0	1/1:2,14:16:36.12:530,36,0	0/0:13,0:13:39.12:0,39,497	0/0:17,0:17:51.17:0,51,659	0/0:14,0:14:42.12:0,42,529	1/1:0,16:16:45.15:674,45,0	1/1:0,7:7:21.07:314,21,0	0/0:20,0:20:54.16:0,54,686	1/1:0,25:25:63.17:917,63,0	0/0:18,0:18:48.06:0,48,549	0/0:22,0:22:60.18:0,60,759	0/0:32,0:32:87.25:0,87,1098	0/0:22,0:22:60.18:0,60,763	0/0:9,0:9:27.09:0,27,350	0/0:35,0:35:96.26:0,96,1211	1/1:2,11:13:30.10:437,30,0	1/1:1,16:17:48.16:710,48,0	0/0:13,0:13:39.05:0,39,471	0/0:7,0:7:21.03:0,21,253
chr10	43446135	.	A	AC	2148.57	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=12.107;DP=495;FS=8.038;HRun=6;HaplotypeScore=66.5324;InbreedingCoeff=0.9969;MQ=77.38;MQ0=0;MQRankSum=-1.112;QD=16.03;ReadPosRankSum=1.164;VQSLOD=2.9446;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:17,1:18:44.50:328,45,0	0/0:11,0:11:33.04:0,33,326	0/0:26,0:25:51:0,51,500	0/0:11,0:11:23.93:0,24,213	1/1:10,0:10:23.73:167,24,0	0/0:18,0:18:51.09:0,51,513	0/0:21,0:21:63.14:0,63,643	0/0:22,0:22:51.10:0,51,515	0/0:26,0:26:72.16:0,72,734	1/1:14,0:14:38.35:260,38,0	1/1:14,0:14:35.75:283,36,0	0/0:15,0:15:39.08:0,39,398	0/0:17,0:17:51.11:0,51,519	0/0:15,0:15:39.07:0,39,391	1/1:16,0:16:44.08:267,44,0	1/1:7,0:7:20.65:136,21,0	0/0:20,0:20:54.09:0,54,542	1/1:24,0:24:57.40:399,57,0	0/0:18,0:18:36.07:0,36,367	0/0:21,0:21:57.13:0,57,581	0/0:33,0:33:87.17:0,87,879	0/0:22,0:22:59.95:0,60,602	0/0:10,0:10:27.06:0,27,275	0/0:35,0:35:96.20:0,96,971	1/1:11,2:13:29.43:199,29,0	1/1:17,1:18:47.23:324,47,0	0/0:13,0:13:33.07:0,33,337	0/0:7,0:7:18.04:0,18,184
chr10	43446472	.	ATG	A	9230.72	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=20.254;DP=773;FS=3.359;HRun=0;HaplotypeScore=143.1927;InbreedingCoeff=0.9999;MQ=70.82;MQ0=1;MQRankSum=-6.507;QD=41.21;ReadPosRankSum=2.998;VQSLOD=6.3350;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,49:49:99:1938,129,0	0/0:13,0:13:39.13:0,39,792	0/0:21,0:20:60.17:0,60,1119	0/0:24,0:24:34.63:0,35,938	0/0:13,0:13:36.12:0,36,698	0/0:18,0:18:54.17:0,54,1043	0/0:32,0:32:96.33:0,96,1888	0/0:30,0:30:87.26:0,87,1714	0/0:29,0:29:87.28:0,87,1731	1/1:0,27:27:81.27:1235,81,0	1/1:0,16:16:42.06:591,42,0	0/0:31,0:31:93.31:0,93,1822	0/0:25,0:25:75.24:0,75,1486	0/0:37,0:37:99:0,111,2240	1/1:4,30:35:96.15:1403,96,0	1/1:1,18:19:51.17:768,51,0	0/0:34,0:34:99:0,102,2036	1/1:0,26:26:75.19:1120,75,0	0/0:29,0:29:87.28:0,87,1708	0/0:23,0:23:66.21:0,66,1286	0/0:44,0:44:99:0,132,2646	0/0:32,0:32:90.28:0,90,1721	0/0:19,0:19:57.18:0,57,1119	0/0:31,0:31:90.31:0,90,1811	1/1:0,19:19:48.16:708,48,0	1/1:1,32:33:96.33:1469,96,0	0/0:38,0:38:99:0,114,2296	0/0:26,0:26:78.27:0,78,1585
chr10	43447795	.	G	GCACA	573.25	PASS	AB=0.964;AC=9;AF=0.161;AN=56;BaseQRankSum=6.266;DP=585;FS=16.353;HRun=0;HaplotypeScore=155.2124;InbreedingCoeff=0.2180;MQ=41.19;MQ0=70;MQRankSum=-5.369;QD=5.36;ReadPosRankSum=1.168;VQSLOD=2.0023;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:7,11:16:1.20:3,1,0	0/0:2,0:1:3.01:0,3,62	0/0:25,0:1:3.01:0,3,62	0/0:37,0:9:15.05:0,15,252	0/0:13,0:10:14.87:0,15,306	0/0:25,0:20:29.48:0,29,597	0/0:37,0:29:55.05:0,55,1084	0/0:19,0:16:45.05:0,45,720	0/0:22,0:19:36.12:0,36,721	0/1:17,0:16:25.01:299,0,25	0/0:15,1:16:16.82:0,17,106	0/0:20,0:19:32.64:0,33,661	0/0:22,0:17:43.03:0,43,862	0/0:14,0:14:29.73:0,30,606	0/1:14,4:16:7.92:10,0,8	0/1:18,0:17:3.36:99,0,3	0/0:32,0:28:79.08:0,79,1455	0/1:12,0:12:43.33:122,0,43	0/0:13,0:12:27.09:0,27,562	0/0:12,0:10:14.85:0,15,311	0/0:61,0:50:75.15:0,75,1536	0/0:25,0:24:43.92:0,44,928	0/0:22,0:20:47.85:0,48,973	0/0:28,0:25:57.12:0,57,1125	1/1:11,1:11:3:27,3,0	0/1:12,0:10:32.79:140,0,33	0/0:18,0:17:41.73:0,42,839	0/0:15,0:11:24.01:0,24,498
chr10	43447797	.	G	GCACA	563.48	PASS	AB=0.820;AC=6;AF=0.111;AN=54;BaseQRankSum=3.069;DP=576;FS=8.359;HRun=0;HaplotypeScore=156.6142;InbreedingCoeff=-0.1430;MQ=41.15;MQ0=71;MQRankSum=-3.214;QD=5.99;ReadPosRankSum=0.292;VQSLOD=1.9501;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:24:26.48:26,0,59	0/0:3,0:2:3.01:0,3,62	0/0:26,0:2:3.01:0,3,62	0/0:39,0:10:24.06:0,24,403	0/0:14,0:11:14.87:0,15,309	0/0:24,0:19:29.48:0,29,595	0/0:37,0:29:55.05:0,55,1104	0/0:16,0:13:38.95:0,39,694	0/0:23,0:20:39.11:0,39,706	0/1:11,5:14:99:343,0,160	0/0:6,4:11:9.02:0,9,104	0/0:20,0:19:29.63:0,30,621	0/0:23,0:18:45.99:0,46,853	0/0:13,0:13:29.71:0,30,569	0/1:14,3:15:14.44:14,0,25	0/1:6,9:14:31.48:61,0,31	0/0:32,0:28:78.82:0,79,1436	0/1:8,3:11:59.10:59,0,95	0/0:10,0:11:27.09:0,27,562	0/0:13,0:11:17.71:0,18,356	0/0:59,0:50:66.17:0,66,1429	0/0:24,0:23:46.93:0,47,956	0/0:22,0:20:50.54:0,51,983	0/0:27,0:24:51.12:0,51,1040	./.	0/1:8,1:7:74.24:181,0,74	0/0:18,0:17:41.70:0,42,793	0/0:15,0:11:24.01:0,24,498
chr10	43447822	.	TTG	T	660.29	PASS	AB=0.993;AC=20;AF=0.357;AN=56;BaseQRankSum=9.461;DP=643;FS=17.138;HRun=0;HaplotypeScore=113.9559;InbreedingCoeff=0.3727;MQ=44.22;MQ0=56;MQRankSum=-5.236;QD=1.98;ReadPosRankSum=-0.312;VQSLOD=1.3331;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:27,1:25:8.99:58,9,0	0/0:5,0:4:12.04:0,12,199	0/0:69,0:7:11:0,11,269	0/1:68,4:18:94.28:94,0,397	0/0:13,0:11:21.06:0,21,315	0/1:26,0:24:36.38:36,0,517	0/0:31,0:26:43.38:0,43,770	0/0:27,0:25:72.23:0,72,1150	0/0:15,4:17:35.48:0,35,556	1/1:21,0:20:50.66:223,51,0	0/1:12,0:12:0.48:1,0,0	0/0:21,1:22:56.68:0,57,864	0/0:20,0:16:47.64:0,48,702	0/0:12,0:12:30.10:0,30,499	1/1:19,0:18:2.27:25,2,0	1/1:10,0:9:2.41:17,2,0	0/1:30,0:26:37.49:37,0,854	1/1:14,0:14:22.61:94,23,0	0/0:14,0:11:29.66:0,30,413	0/1:16,0:14:10.02:10,0,459	0/1:55,0:51:79.68:80,0,1101	0/0:22,0:20:39:0,39,596	0/0:17,0:15:9.98:0,10,486	0/0:21,0:20:56.54:0,57,840	0/1:7,0:7:0.33:0,0,1	1/1:16,0:15:7:123,7,0	0/0:16,0:15:20.68:0,21,459	0/1:7,0:6:35.80:36,0,56
chr10	43447824	.	GGTGT	G	3907.72	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=11.884;DP=651;FS=5.777;HRun=0;HaplotypeScore=120.4462;InbreedingCoeff=0.9558;MQ=44.66;MQ0=53;MQRankSum=-8.640;QD=30.77;ReadPosRankSum=-1.094;VQSLOD=2.7292;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,24:26:35:534,35,0	0/0:5,0:4:12.04:0,12,304	0/0:72,0:8:11.44:0,11,425	0/0:73,0:20:32.20:0,32,871	0/0:15,0:13:24.08:0,24,590	0/0:23,0:21:39.13:0,39,960	0/0:32,0:27:53.97:0,54,1240	0/0:27,0:26:66.18:0,66,1535	0/0:20,0:18:39.05:0,39,890	1/1:1,20:20:60.21:1040,60,0	1/1:0,12:12:27.08:322,27,0	0/0:22,0:22:53.98:0,54,1348	0/0:21,0:17:51.13:0,51,1171	0/0:12,0:12:30.10:0,30,759	1/1:1,18:18:32.84:393,33,0	1/1:1,9:9:21.07:271,21,0	0/0:28,0:26:55.30:0,55,1462	1/1:0,14:14:27.09:468,27,0	0/0:14,0:11:27.09:0,27,642	0/0:16,0:14:33.11:0,33,829	0/0:58,0:53:84.94:0,85,1937	0/0:21,0:21:41.93:0,42,957	0/0:15,0:15:38.59:0,39,851	0/0:21,0:20:60.21:0,60,1419	1/1:1,6:7:14.72:183,15,0	1/1:1,14:15:42.14:696,42,0	0/0:17,0:16:33.11:0,33,803	0/0:6,0:5:3.01:0,3,76
chr10	43449563	.	A	ATTTT	6152.24	PASS	AB=1.000;AC=26;AF=0.464;AN=56;BaseQRankSum=-2.372;DP=476;FS=3.135;HRun=10;HaplotypeScore=97.5202;InbreedingCoeff=0.8515;MQ=67.96;MQ0=0;MQRankSum=-3.988;QD=26.75;ReadPosRankSum=-5.923;VQSLOD=2.1157;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:8,17:33:50.34:899,50,0	1/1:6,1:10:27.09:400,27,0	0/1:16,0:15:60.31:60,0,258	0/1:13,0:9:16.74:17,0,36	0/0:12,0:13:36.10:0,36,491	1/1:3,0:7:15.05:188,15,0	1/1:2,0:24:42.05:520,42,0	0/0:25,0:25:35.78:0,36,478	1/1:2,0:10:18.06:226,18,0	1/1:4,6:11:27.09:601,27,0	1/1:7,4:17:32.32:522,32,0	0/0:11,0:12:27:0,27,362	0/0:18,0:18:35.95:0,36,506	0/0:12,0:13:26.95:0,27,363	1/1:7,6:16:19.09:316,19,0	1/1:2,14:18:21.04:411,21,0	0/0:21,0:22:57.11:0,57,762	1/1:6,9:17:20.28:352,20,0	0/0:13,0:13:33.09:0,33,466	0/0:20,0:20:51.11:0,51,722	0/0:30,0:32:78.14:0,78,1099	0/0:13,0:13:36.07:0,36,472	0/0:10,0:12:33.05:0,33,429	0/0:19,0:19:45.04:0,45,637	1/1:3,8:13:27.09:557,27,0	1/1:3,17:23:57.15:1085,57,0	0/0:14,0:15:45.07:0,45,587	0/0:17,0:18:31.15:0,31,409
chr10	43449769	.	AT	A	4857.52	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=14.486;DP=622;FS=3.083;HRun=4;HaplotypeScore=69.1079;InbreedingCoeff=0.9987;MQ=65.18;MQ0=2;MQRankSum=1.992;QD=30.94;ReadPosRankSum=0.029;VQSLOD=5.1217;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,150,2081	0/0:7,0:7:21.07:0,21,294	0/0:25,0:19:56.97:0,57,720	0/0:29,0:25:55.74:0,56,826	1/1:1,13:14:39.12:468,39,0	0/0:28,0:28:81.27:0,81,1131	0/0:18,0:18:54.18:0,54,756	1/1:5,25:30:75.20:875,75,0	0/0:23,0:23:66.22:0,66,909	0/0:20,0:20:60.20:0,60,840	0/0:17,0:17:48.16:0,48,668	0/0:15,0:15:42.14:0,42,587	0/0:16,0:16:48.16:0,48,672	0/0:15,0:15:42.14:0,42,588	0/0:21,0:21:60.20:0,60,837	0/0:8,0:8:24.08:0,24,336	0/0:44,0:44:99:0,126,1762	0/0:22,0:22:57.19:0,57,797	1/1:5,18:22:51.14:598,51,0	1/1:1,15:16:45.14:540,45,0	1/1:2,38:40:99:1296,108,0	0/0:16,0:16:48.15:0,48,654	0/0:14,0:14:39.12:0,39,529	0/0:34,0:34:96.32:0,96,1344	0/0:17,0:17:51.14:0,51,680	0/0:25,0:25:75.24:0,75,1035	1/1:2,21:23:63.19:756,63,0	1/1:2,9:11:27.08:324,27,0
chr10	43449936	.	TA	T	3029.02	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=12.001;DP=601;FS=8.806;HRun=7;HaplotypeScore=58.6491;InbreedingCoeff=0.9988;MQ=69.41;MQ0=0;MQRankSum=-1.103;QD=24.04;ReadPosRankSum=-0.236;VQSLOD=3.4220;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,108,1327	0/0:13,0:13:36.12:0,36,453	0/0:15,0:14:33.80:0,34,389	0/0:18,0:17:32.82:0,33,357	0/0:33,0:33:87.24:0,87,1056	0/0:31,0:31:87.27:0,87,1083	0/0:24,0:24:72.20:0,72,878	1/1:2,19:21:57.11:574,57,0	0/0:16,0:16:45.13:0,45,553	0/0:22,0:22:60.19:0,60,747	0/0:22,0:22:66.17:0,66,783	0/0:18,0:18:45.13:0,45,553	0/0:10,0:10:27.09:0,27,340	0/0:15,0:15:42.12:0,42,515	0/0:16,0:16:48.14:0,48,591	0/0:15,0:15:45.12:0,45,541	0/0:35,0:35:99:0,99,1217	0/0:20,0:20:54.17:0,54,677	1/1:2,20:22:59.92:575,60,0	1/1:1,27:28:75.12:753,75,0	1/1:0,19:19:45.10:459,45,0	0/0:22,0:22:57.18:0,57,717	0/0:20,0:20:57.18:0,57,717	0/0:18,0:18:42.12:0,42,514	0/0:23,0:23:66.19:0,66,806	0/0:31,0:31:87.26:0,87,1071	1/1:3,24:27:63.14:643,63,0	1/1:0,9:9:21.05:214,21,0
chr10	43451302	.	G	GT	9914.37	PASS	AB=0.821;AC=36;AF=0.643;AN=56;BaseQRankSum=-13.993;DP=562;FS=24.942;HRun=8;HaplotypeScore=49.8623;InbreedingCoeff=0.8348;MQ=71.17;MQ0=0;MQRankSum=0.347;QD=27.46;ReadPosRankSum=4.127;VQSLOD=3.2554;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,44:48:99:1420,123,0	1/1:2,5:7:15.04:172,15,0	0/1:13,0:13:32.47:32,0,87	0/0:3,0:3:3:0,3,27	0/0:20,0:20:45.01:0,45,412	1/1:1,20:21:60.18:692,60,0	1/1:2,12:14:39.10:439,39,0	0/0:45,0:45:99:0,120,1095	1/1:4,13:17:36.11:415,36,0	1/1:2,19:21:57.17:658,57,0	1/1:1,23:24:60.09:677,60,0	1/1:1,12:14:38.95:430,39,0	1/1:2,17:19:45.13:519,45,0	1/1:2,15:17:45.13:519,45,0	1/1:7,18:25:54.16:623,54,0	1/1:4,16:20:42.12:485,42,0	0/0:19,0:19:57.01:0,57,516	1/1:1,14:15:36.11:415,36,0	0/0:23,0:23:57:0,57,514	0/0:27,0:27:81.04:0,81,741	0/0:15,0:17:43.09:0,43,368	0/1:4,5:9:4.35:131,0,4	1/1:2,13:15:36.11:415,36,0	1/1:0,19:19:45.13:519,45,0	1/1:0,17:17:51.15:588,51,0	1/1:3,23:26:66.20:762,66,0	0/0:32,0:30:84.03:0,84,768	0/0:15,0:15:42.02:0,42,384
chr10	43451531	.	AT	A	6832.86	PASS	AB=0.778;AC=38;AF=0.679;AN=56;BaseQRankSum=-7.737;DP=546;FS=16.842;HRun=11;HaplotypeScore=63.8509;InbreedingCoeff=0.8495;MQ=73.94;MQ0=1;MQRankSum=-4.022;QD=16.91;ReadPosRankSum=2.368;VQSLOD=4.2379;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,27:31:71.91:591,72,0	1/1:0,6:6:14.98:123,15,0	0/0:26,0:22:19:0,19,296	0/1:10,1:10:11.31:11,0,112	1/1:2,16:18:44.93:369,45,0	1/1:1,13:14:35.96:296,36,0	1/1:5,17:22:44.92:369,45,0	1/1:12,18:30:32.73:419,33,0	1/1:4,13:17:26.96:222,27,0	1/1:3,17:21:46.96:375,47,0	0/1:7,8:16:5.30:148,0,5	0/0:0,0:9:25.60:0,26,128	0/0:2,0:10:19.95:0,20,100	0/0:4,0:15:22.76:0,23,114	1/1:5,14:19:32.95:270,33,0	1/1:1,18:19:47.85:394,48,0	0/0:24,1:25:29.46:0,29,508	1/1:3,21:25:52.97:425,53,0	1/1:7,20:27:30.90:457,31,0	1/1:5,20:25:59.92:492,60,0	1/1:6,11:18:28.64:289,29,0	0/0:4,0:17:40.22:0,40,225	0/0:5,0:14:28.77:0,29,172	0/0:4,0:25:42.92:0,43,228	1/1:9,13:22:29.93:246,30,0	1/1:5,21:26:48.55:548,49,0	1/1:3,29:32:83.88:690,84,0	1/1:0,5:5:11.99:99,12,0
chr10	43452915	.	C	CA	6395.57	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=8.821;DP=529;FS=3.078;HRun=9;HaplotypeScore=114.2245;InbreedingCoeff=0.9753;MQ=71.90;MQ0=0;MQRankSum=0.543;QD=23.78;ReadPosRankSum=0.937;VQSLOD=4.3245;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,14:18:36.10:398,36,0	1/1:1,9:10:27.07:299,27,0	0/0:14,0:12:13.22:0,13,105	0/0:22,0:21:31.69:0,32,305	1/1:7,28:36:60.99:869,61,0	1/1:3,11:14:33.09:365,33,0	1/1:9,15:24:22.03:458,22,0	0/0:24,0:24:59.97:0,60,516	1/1:3,17:20:40.35:434,40,0	1/1:4,28:32:81.20:881,81,0	1/1:2,19:21:45.12:498,45,0	0/0:13,0:13:38.96:0,39,331	0/0:8,0:8:20.95:0,21,172	0/0:16,0:16:38.99:0,39,339	1/1:4,12:16:33.08:358,33,0	1/1:2,15:17:10.03:332,10,0	0/0:23,0:23:62.99:0,63,547	1/1:3,11:14:7.04:306,7,0	0/0:15,0:15:29.98:0,30,257	0/0:26,0:26:65.98:0,66,573	0/0:13,0:13:29.98:0,30,260	0/0:9,0:9:23.98:0,24,208	0/0:21,0:21:59.99:0,60,521	0/0:16,0:16:41.99:0,42,365	1/1:1,19:21:53.91:552,54,0	1/1:5,21:26:17.29:645,17,0	0/0:26,0:26:74.97:0,75,647	0/0:14,0:14:38.98:0,39,339
chr10	43453358	.	G	GTA	6600.25	PASS	AB=0.625;AC=13;AF=0.232;AN=56;BaseQRankSum=-11.972;DP=794;FS=12.254;HRun=0;HaplotypeScore=121.3529;InbreedingCoeff=0.8706;MQ=65.16;MQ0=0;MQRankSum=1.381;QD=30.28;ReadPosRankSum=-1.643;VQSLOD=5.3629;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:51.08:0,51,613	0/0:10,0:10:24.08:0,24,300	0/0:13,0:13:18.06:0,18,223	0/0:9,0:8:0.68:0,1,92	1/1:10,4:36:61.56:604,62,0	0/0:16,0:16:36.10:0,36,436	0/0:16,0:17:47.98:0,48,573	1/1:9,40:48:99:1953,120,0	0/0:37,0:37:99:0,99,1219	0/0:52,0:53:99:0,114,1376	0/0:34,0:34:84.26:0,84,1038	0/0:27,0:27:75.24:0,75,938	0/0:38,0:38:99:0,111,1360	0/0:32,0:32:84.26:0,84,1037	0/0:34,0:35:90.12:0,90,1102	0/0:32,0:32:72.20:0,72,875	0/0:20,0:20:44.87:0,45,561	0/0:19,0:19:48.11:0,48,580	0/1:6,7:15:7.52:354,0,8	1/1:7,37:45:70.85:1671,71,0	1/1:2,16:20:24.08:396,24,0	0/0:28,0:28:69.20:0,69,849	0/0:42,0:42:99:0,102,1261	0/0:25,0:25:51.16:0,51,638	0/0:19,0:21:56.82:0,57,640	0/0:49,0:49:99:0,135,1610	1/1:9,24:33:57.19:938,57,0	1/1:6,14:20:35.49:684,35,0
chr10	43453506	.	T	TTA	13485.39	PASS	AB=0.571;AC=23;AF=0.411;AN=56;BaseQRankSum=0.381;DP=894;FS=3.606;HRun=0;HaplotypeScore=156.7990;InbreedingCoeff=0.9249;MQ=64.06;MQ0=4;MQRankSum=1.195;QD=33.38;ReadPosRankSum=5.727;VQSLOD=6.7826;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:10,30:41:72.24:1179,72,0	1/1:1,11:12:21.07:351,21,0	0/0:25,0:23:40.37:0,40,544	0/0:25,0:23:19.96:0,20,325	0/0:26,0:26:66.07:0,66,717	1/1:3,16:19:42.14:703,42,0	1/1:6,14:21:33.11:551,33,0	0/0:45,0:45:99:0,114,1251	1/1:4,29:33:72.24:1180,72,0	1/1:5,42:47:99:1936,126,0	1/1:8,36:44:69.48:1444,69,0	0/0:37,0:37:90.23:0,90,1090	0/0:32,0:32:81.22:0,81,989	0/0:34,0:34:87.28:0,87,1104	1/1:8,38:46:96.31:1605,96,0	1/1:5,41:45:90.31:1506,90,0	0/0:25,0:25:60.15:0,60,732	1/1:2,21:24:56.68:904,57,0	0/0:14,0:14:36.10:0,36,436	0/0:35,0:35:37.10:0,37,919	0/0:29,0:30:80.78:0,81,927	0/0:34,0:34:81.21:0,81,970	0/0:33,0:33:87.24:0,87,1078	0/0:35,0:35:73.33:0,73,873	0/1:6,17:24:31.23:596,0,31	1/1:10,33:44:65.99:1531,66,0	0/0:35,0:35:87.19:0,87,1045	0/0:25,0:25:59.91:0,60,621
chr10	43453874	.	C	CA	906.48	PASS	AB=0.857;AC=9;AF=0.180;AN=50;BaseQRankSum=6.918;DP=431;FS=11.892;HRun=8;HaplotypeScore=136.9015;InbreedingCoeff=0.6463;MQ=39.62;MQ0=25;MQRankSum=-6.222;QD=8.32;ReadPosRankSum=-5.153;VQSLOD=-0.5794;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:16:11.88:0,12,110	0/0:2,0:2:0.30:0,0,23	./.	./.	0/0:16,0:15:12.62:0,13,74	0/0:12,0:12:15:0,15,137	0/0:27,0:25:19.98:0,20,212	1/1:11,7:18:14.23:266,14,0	0/0:13,0:13:3.61:0,4,158	0/0:16,0:14:14.99:0,15,137	0/0:14,0:14:17.81:0,18,164	0/0:15,0:13:13.88:0,14,135	0/0:8,0:8:9.70:0,10,129	0/0:18,0:17:8.41:0,8,239	0/0:10,0:9:1.16:0,1,71	0/0:10,0:9:1.46:0,1,48	0/0:29,0:26:43.87:0,44,390	0/0:21,0:20:19.44:0,19,190	0/1:15,3:15:5.89:94,0,6	1/1:15,9:23:32.61:256,33,0	./.	0/0:12,0:11:20.99:0,21,192	0/0:27,0:25:17.35:0,17,209	0/0:12,0:10:9.33:0,9,129	0/0:15,0:15:14.98:0,15,137	0/0:18,0:18:38.74:0,39,347	1/1:17,5:18:23.03:192,23,0	1/1:26,1:24:19.78:251,20,0
chr10	43453882	.	AGAACC	A	1077.02	PASS	AB=0.950;AC=18;AF=0.346;AN=52;BaseQRankSum=-5.736;DP=447;FS=8.137;HRun=0;HaplotypeScore=104.9143;InbreedingCoeff=-0.3920;MQ=37.80;MQ0=23;MQRankSum=-1.422;QD=3.73;ReadPosRankSum=-4.326;VQSLOD=-0.1116;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:18:24.08:0,24,442	0/1:3,0:3:54.52:55,0,88	./.	./.	0/1:11,0:11:64.54:65,0,138	0/0:13,0:13:11.42:0,11,335	0/1:22,0:21:30.01:30,0,766	0/1:20,0:20:99:257,0,280	0/1:12,0:12:17.97:18,0,509	0/1:15,0:13:8.87:9,0,311	0/1:16,0:16:10.66:11,0,487	0/1:13,1:12:73.60:74,0,324	0/1:8,0:8:99:136,0,306	0/1:19,0:18:99:210,0,678	0/0:9,0:8:17.86:0,18,278	0/0:9,0:7:8.52:0,9,159	0/0:31,0:28:37.68:0,38,1251	0/0:20,1:20:29.97:0,30,492	0/1:23,4:25:99:268,0,152	0/1:19,1:19:25.72:26,0,200	1/1:4,0:3:2.97:20,3,0	0/1:11,2:12:12.04:12,0,420	0/1:19,14:32:17.24:17,0,648	0/0:11,0:9:18.53:0,19,434	0/0:16,0:16:23.97:0,24,436	0/1:23,1:24:14.23:14,0,1164	0/0:22,0:18:11.90:0,12,278	0/1:26,0:23:7.54:8,0,670
chr10	43456139	.	T	TGTTA	9640.79	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-11.052;DP=653;FS=7.037;HRun=0;HaplotypeScore=103.8798;InbreedingCoeff=0.9998;MQ=83.89;MQ0=0;MQRankSum=-6.962;QD=59.51;ReadPosRankSum=-0.559;VQSLOD=6.3035;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,126,2274	0/0:10,0:10:30.10:0,30,559	0/0:20,0:20:57.20:0,57,1046	0/0:22,0:21:57.18:0,57,981	0/0:18,0:18:42.11:0,42,697	0/0:16,0:16:48.15:0,48,857	0/0:29,0:29:78.22:0,78,1351	1/1:7,21:29:81.26:1870,81,0	0/0:22,0:22:66.23:0,66,1229	0/0:27,0:27:78.27:0,78,1447	0/0:14,0:14:36.11:0,36,621	0/0:21,0:21:60.21:0,60,1101	0/0:16,0:16:42.14:0,42,773	0/0:22,0:22:57.20:0,57,1056	0/0:22,0:22:66.21:0,66,1201	0/0:14,0:14:39.12:0,39,683	0/0:31,0:31:81.28:0,81,1499	0/0:23,0:23:63.22:0,63,1133	1/1:4,13:17:42.13:1063,42,0	1/1:5,18:24:54.18:1255,54,0	1/1:7,32:40:84.28:2068,84,0	0/0:21,0:21:60.19:0,60,1083	0/0:19,0:19:48.16:0,48,895	0/0:31,0:31:90.31:0,90,1659	0/0:24,0:24:63.21:0,63,1140	0/0:23,0:23:57.18:0,57,1016	1/1:3,29:32:79.15:2029,79,0	1/1:4,16:20:54.18:1357,54,0
chr10	43457437	.	GGGTGGCAGAGCGTGCGTGCGTGC	G	1223.42	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.522;DP=526;FS=0.000;HRun=0;HaplotypeScore=298.9066;InbreedingCoeff=0.9563;MQ=70.36;MQ0=0;MQRankSum=-4.382;QD=122.34;ReadPosRankSum=2.648;VQSLOD=2.4067;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:57.20:0,57,4958	0/0:5,0:5:15.05:0,15,1117	0/0:8,0:8:21.07:0,21,1449	0/0:12,0:12:30.10:0,30,1781	0/0:9,0:9:27.09:0,27,2011	0/0:14,0:14:30.10:0,30,2732	0/0:27,0:27:75.26:0,75,7105	0/0:15,0:15:30.10:0,30,2445	0/0:8,0:8:18.06:0,18,1809	0/0:16,0:16:45.15:0,45,4136	0/0:13,0:13:27.09:0,27,2466	0/0:25,0:25:72.25:0,72,6184	0/0:15,0:15:39.12:0,39,3595	0/0:22,0:22:63.22:0,63,5946	0/0:13,0:13:36.12:0,36,3308	1/1:1,9:10:21.07:1316,21,0	0/0:42,0:42:99:0,114,10486	0/0:39,0:39:99:0,105,8914	0/0:19,0:19:54.19:0,54,3405	0/0:10,0:10:27.08:0,27,2076	0/0:74,0:74:99:0,193,17816	0/0:13,0:13:36.12:0,36,3831	0/0:7,0:7:21.07:0,21,1825	0/0:35,0:35:99:0,102,9869	0/0:20,0:20:54.18:0,54,5226	0/0:16,0:16:45.15:0,45,3995	0/0:8,0:8:21.07:0,21,1953	0/0:10,0:10:30.10:0,30,2656
chr10	43458401	.	G	GGTGTGTGTGTGT	14801.75	PASS	AC=48;AF=0.889;AN=54;BaseQRankSum=1.336;DP=614;FS=21.298;HRun=0;HaplotypeScore=260.0016;InbreedingCoeff=0.6105;MQ=60.79;MQ0=6;MQRankSum=-5.698;QD=28.97;ReadPosRankSum=0.533;VQSLOD=2.8522;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:34,0:32:17.47:598,17,0	./.	0/0:30,0:18:24.07:0,24,520	0/0:42,0:34:26.13:0,26,518	1/1:17,3:22:5.26:332,5,0	1/1:18,0:18:3.01:72,3,0	1/1:28,0:27:9.03:384,9,0	1/1:30,0:28:18.06:656,18,0	1/1:25,0:24:15.02:546,15,0	1/1:33,0:33:42.13:1594,42,0	1/1:13,0:13:3.01:84,3,0	1/1:15,0:14:12.04:586,12,0	1/1:20,0:22:21.07:1097,21,0	1/1:22,0:22:12.01:320,12,0	1/1:28,0:28:25.30:1066,25,0	1/1:13,0:14:21.07:1067,21,0	0/0:25,0:27:60.20:0,60,1960	1/1:11,0:11:9.92:387,10,0	1/1:20,0:19:25.32:906,25,0	1/1:13,5:22:15.05:715,15,0	1/1:18,5:25:1.69:166,2,0	1/1:14,0:13:6.02:186,6,0	1/1:17,0:19:9.85:471,10,0	1/1:25,0:25:6.48:200,6,0	1/1:16,0:16:3:66,3,0	1/1:25,0:23:31.31:1183,31,0	1/1:14,8:26:36.12:1943,36,0	1/1:2,1:3:3.01:177,3,0
chr10	43460736	.	G	GGT	2690.76	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-9.856;DP=851;FS=0.491;HRun=0;HaplotypeScore=102.1486;InbreedingCoeff=0.9983;MQ=70.10;MQ0=2;MQRankSum=0.274;QD=23.60;ReadPosRankSum=-1.752;VQSLOD=3.8456;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:62,0:62:99:0,153,1855	1/1:3,10:13:20.43:309,20,0	0/0:40,0:27:50.49:0,50,552	0/0:35,0:24:29.44:0,29,503	0/0:20,0:20:42.11:0,42,506	1/1:3,21:25:36.12:598,36,0	1/1:6,34:40:69.24:1146,69,0	0/0:31,0:31:69.15:0,69,798	1/1:8,27:36:48.16:797,48,0	0/0:33,0:33:72.16:0,72,856	0/0:18,0:18:42.13:0,42,528	0/0:37,0:37:90.29:0,90,1133	0/0:29,0:29:81.24:0,81,997	0/0:47,0:47:99:0,117,1474	0/0:33,0:32:89.86:0,90,1094	0/0:34,0:34:93.25:0,93,1123	0/0:34,0:34:81.13:0,81,941	0/0:24,0:24:63.17:0,63,763	0/0:18,0:18:51.13:0,51,603	0/0:22,0:22:57.18:0,57,718	0/0:42,0:42:99:0,114,1401	0/0:22,0:22:51.16:0,51,643	0/0:20,0:20:48.13:0,48,575	0/0:30,0:30:78.15:0,78,912	0/0:30,0:30:75.23:0,75,934	0/0:29,0:30:72.05:0,72,873	0/0:35,0:36:77.33:0,77,1034	0/0:10,0:10:30.05:0,30,336
chr10	43461459	.	TCTCACTCATTCA	T	2935.38	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=6.988;DP=781;FS=14.583;HRun=0;HaplotypeScore=236.8823;InbreedingCoeff=0.9409;MQ=64.14;MQ0=4;MQRankSum=-2.371;QD=19.97;ReadPosRankSum=-4.320;VQSLOD=0.8314;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:96.27:0,96,3475	0/0:14,0:14:42.14:0,42,1821	0/0:28,0:26:29.52:0,30,558	0/0:29,0:25:33.03:0,33,585	0/0:28,0:28:69.21:0,69,3070	0/0:26,0:26:54.15:0,54,2080	0/0:19,0:19:48.13:0,48,1376	1/1:10,17:27:50.92:581,51,0	0/0:39,0:39:99:0,105,4021	0/0:32,0:32:81.27:0,81,3111	0/0:20,0:20:51.17:0,51,1754	0/0:26,0:26:57.18:0,57,2418	0/0:38,0:38:93.28:0,93,4158	0/0:34,0:34:90.31:0,90,3776	0/0:30,0:29:72.25:0,72,3433	0/0:30,0:30:78.27:0,78,3607	0/0:35,0:35:84.27:0,84,3777	0/0:21,0:21:25.32:0,25,1289	1/1:18,0:18:39.11:816,39,0	1/1:26,0:26:35.86:617,36,0	1/1:26,0:26:3.01:98,3,0	0/0:36,0:36:90.14:0,90,3487	0/0:19,0:19:57.20:0,57,2361	0/0:32,0:32:81.25:0,81,2953	0/0:27,0:26:39.13:0,39,1425	0/0:34,0:34:84.29:0,84,3568	1/1:36,0:35:30.09:824,30,0	1/1:14,0:14:6.02:174,6,0
chr10	43461460	.	C	CTCACTCAT	4949.54	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=2.154;DP=802;FS=15.351;HRun=0;HaplotypeScore=179.5019;InbreedingCoeff=0.9408;MQ=63.68;MQ0=5;MQRankSum=-3.460;QD=30.55;ReadPosRankSum=-5.203;VQSLOD=2.6024;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:96.27:0,96,1974	0/0:14,0:14:42.14:0,42,1017	0/0:28,0:26:26.53:0,27,494	0/0:31,0:25:32.93:0,33,524	0/0:28,0:28:69.21:0,69,1598	0/0:26,0:26:54.12:0,54,1071	0/0:22,0:22:48.13:0,48,894	1/1:28,0:28:54.18:1010,54,0	0/0:39,0:39:99:0,105,2176	0/0:32,0:32:81.26:0,81,1798	0/0:20,0:20:51.17:0,51,1099	0/0:25,0:25:57.17:0,57,1243	0/0:38,0:38:93.28:0,93,2082	0/0:34,0:34:87.30:0,87,2001	0/0:30,0:29:72.25:0,72,1738	0/0:31,0:30:78.27:0,78,1902	0/0:36,0:36:84.25:0,84,1923	0/0:20,0:21:25.32:0,25,664	1/1:7,11:20:48.14:1265,48,0	1/1:4,23:27:35.92:836,36,0	1/1:7,23:31:3.01:118,3,0	0/0:36,0:36:90.14:0,90,1900	0/0:19,0:19:57.20:0,57,1336	0/0:32,0:32:81.25:0,81,1740	0/0:29,0:28:39.13:0,39,876	0/0:34,0:34:84.21:0,84,1971	1/1:11,28:38:36.01:1468,36,0	1/1:5,10:17:6.02:253,6,0
chr10	43461516	.	C	CTCAT	4557.06	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-10.422;DP=823;FS=0.420;HRun=0;HaplotypeScore=141.9510;InbreedingCoeff=0.9401;MQ=56.88;MQ0=24;MQRankSum=9.170;QD=26.65;ReadPosRankSum=-1.991;VQSLOD=4.4252;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,126,1723	0/0:11,0:11:21.02:0,21,271	0/0:12,0:4:5.97:0,6,45	0/0:14,0:3:5.98:0,6,49	0/0:30,0:30:72.12:0,72,974	0/0:28,0:28:66.01:0,66,1107	0/0:20,0:20:54.09:0,54,745	0/0:33,0:23:15.01:0,15,144	0/0:42,0:42:99:0,117,1658	1/1:9,23:34:78.46:1149,78,0	1/1:4,15:20:38.87:509,39,0	0/0:28,0:28:63.12:0,63,902	0/0:38,0:38:87.24:0,87,1338	0/0:38,0:38:96.20:0,96,1373	0/0:42,0:40:99:0,102,1410	0/0:37,0:35:81.13:0,81,1105	0/0:34,0:34:81.07:0,81,1069	1/1:6,30:36:24.08:576,24,0	0/0:14,0:13:32.95:0,33,447	0/0:26,0:26:60.13:0,60,899	0/0:29,0:28:61.30:0,61,835	0/0:35,0:35:99:0,99,1427	0/0:21,0:21:48.12:0,48,721	0/0:30,0:30:85.41:0,85,1213	1/1:7,27:35:12.04:300,12,0	1/1:7,37:43:99:2023,108,0	0/0:30,0:29:54.84:0,55,751	0/0:14,0:14:30.10:0,30,509
chr10	43462779	.	TG	T	5417.34	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=12.206;DP=712;FS=6.617;HRun=7;HaplotypeScore=69.4531;InbreedingCoeff=0.9998;MQ=84.58;MQ0=0;MQRankSum=-2.028;QD=26.82;ReadPosRankSum=-0.020;VQSLOD=5.4113;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,126,1558	0/0:13,0:13:30.10:0,30,377	0/0:21,0:21:60.19:0,60,740	0/0:26,0:26:57.14:0,57,674	1/1:1,27:28:69.15:704,69,0	0/0:16,0:17:44.98:0,45,543	0/0:19,0:19:57.18:0,57,717	1/1:2,21:23:63.14:643,63,0	0/0:26,0:26:72.21:0,72,891	0/0:25,0:25:60.19:0,60,753	0/0:22,0:22:57.14:0,57,699	0/0:27,0:27:78.24:0,78,968	0/0:23,0:23:66.21:0,66,830	0/0:26,0:26:72.21:0,72,892	0/0:24,0:24:69.21:0,69,848	0/0:34,0:34:96.31:0,96,1207	0/0:28,0:28:78.23:0,78,966	0/0:18,0:18:54.17:0,54,679	1/1:3,13:16:39.09:398,39,0	1/1:1,16:17:48.11:490,48,0	1/1:3,66:69:99:1867,183,0	0/0:16,0:16:45.14:0,45,566	0/0:18,0:18:51.12:0,51,623	0/0:23,0:23:57.18:0,57,717	0/0:24,0:24:69.22:0,69,867	0/0:37,0:36:99:0,102,1260	1/1:1,36:37:96.22:979,96,0	1/1:1,11:12:33.07:337,33,0
chr10	43464917	.	A	AG	6148.23	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=-11.040;DP=647;FS=1.981;HRun=1;HaplotypeScore=76.9611;InbreedingCoeff=0.8475;MQ=84.46;MQ0=0;MQRankSum=0.367;QD=38.43;ReadPosRankSum=1.969;VQSLOD=5.6052;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:57:99:0,165,2084	0/0:2,0:2:2.37:0,2,8	0/0:24,0:24:61.85:0,62,764	0/0:21,0:21:31.99:0,32,637	0/0:25,0:25:75.19:0,75,940	0/1:7,0:7:6.29:6,0,9	0/0:11,0:11:6.48:0,6,29	0/0:26,0:26:75.24:0,75,961	0/0:8,0:8:0.43:0,0,3	0/0:21,0:21:60.20:0,60,779	0/0:20,0:20:60.20:0,60,779	1/1:0,31:31:87.29:1304,87,0	1/1:0,21:21:60.20:888,60,0	1/1:1,26:27:66.22:987,66,0	0/0:25,0:25:75.24:0,75,974	0/0:18,0:18:48.16:0,48,623	0/0:35,0:35:99:0,102,1291	0/0:34,0:34:99:0,102,1324	0/0:21,0:21:63.17:0,63,780	0/0:22,0:22:66.20:0,66,842	0/0:35,0:35:99:0,102,1295	1/1:0,24:24:63.21:940,63,0	1/1:2,19:21:54.18:809,54,0	1/1:0,28:29:81.27:1214,81,0	0/0:16,0:16:48.16:0,48,622	0/0:25,0:25:71.83:0,72,934	0/0:29,0:29:87.25:0,87,1099	0/0:12,0:12:36.12:0,36,467
chr10	43464919	.	T	TC	716.73	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=3.811;DP=643;FS=17.126;HRun=3;HaplotypeScore=94.8268;InbreedingCoeff=0.8181;MQ=84.81;MQ0=0;MQRankSum=-4.767;QD=13.78;ReadPosRankSum=-2.342;VQSLOD=1.3825;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,166,1979	1/1:0,2:2:5.98:62,6,0	0/0:23,0:23:61.80:0,62,673	0/0:22,1:23:25.29:0,25,574	0/0:25,0:25:72.22:0,72,863	1/1:0,7:7:21.07:287,21,0	1/1:0,12:12:23.95:260,24,0	0/0:26,0:26:72.21:0,72,854	1/1:0,8:8:21.06:255,21,0	0/0:22,0:22:57.17:0,57,683	0/0:20,0:20:60.18:0,60,720	0/0:32,0:32:40.66:0,41,141	0/0:20,0:20:9.99:0,10,62	0/0:29,0:29:7.36:0,7,117	0/0:25,0:25:75.23:0,75,900	0/0:18,0:18:54.17:0,54,648	0/0:33,0:33:99:0,99,1170	0/0:34,0:34:99:0,102,1223	0/0:21,0:21:60.16:0,60,697	0/0:21,0:21:63.19:0,63,754	0/0:34,0:34:99:0,102,1210	0/1:23,0:23:8.89:9,0,36	0/0:20,0:20:20.82:0,21,63	0/0:30,0:30:38.38:0,38,121	0/0:16,0:16:42.13:0,42,504	0/0:25,0:25:69.21:0,69,828	0/0:27,0:27:81.25:0,81,972	0/0:12,0:12:36.08:0,36,418
chr10	43465690	.	CACTT	C	4817.32	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=12.957;DP=601;FS=0.431;HRun=0;HaplotypeScore=97.5138;InbreedingCoeff=0.9875;MQ=60.98;MQ0=0;MQRankSum=-1.679;QD=47.23;ReadPosRankSum=2.887;VQSLOD=5.5834;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:96.33:0,96,2621	0/0:14,0:14:39.13:0,39,1014	0/0:10,0:10:27.09:0,27,571	0/0:5,0:5:9.03:0,9,245	0/0:31,0:31:93.32:0,93,2546	0/0:20,0:20:57.20:0,57,1506	0/0:26,0:26:72.25:0,72,1951	0/0:38,0:38:99:0,114,2949	0/0:17,0:17:51.18:0,51,1397	0/0:34,0:34:99:0,99,2571	0/0:20,0:20:60.21:0,60,1619	1/1:0,13:13:33.11:639,33,0	1/1:0,19:19:51.17:984,51,0	1/1:1,18:19:51.17:988,51,0	0/0:21,0:21:63.22:0,63,1694	0/0:19,0:19:57.20:0,57,1489	0/0:16,0:16:45.15:0,45,1207	0/0:31,0:31:90.31:0,90,2409	0/0:20,0:20:57.20:0,57,1553	0/0:24,0:24:72.25:0,72,1949	0/0:11,0:11:33.11:0,33,805	1/1:3,19:22:57.20:1103,57,0	1/1:0,17:17:33.11:640,33,0	1/1:0,12:12:23.72:464,24,0	0/0:35,0:35:99:0,102,2702	0/0:29,0:29:87.30:0,87,2360	0/0:28,0:27:84.29:0,84,2180	0/0:18,0:18:54.19:0,54,1469
chr10	43467054	.	T	TC	484.03	PASS	AB=0.962;AC=11;AF=0.324;AN=34;BaseQRankSum=3.973;DP=197;FS=0.000;HRun=5;HaplotypeScore=50.8207;InbreedingCoeff=0.7940;MQ=81.62;MQ0=4;MQRankSum=0.022;QD=9.68;ReadPosRankSum=-1.867;VQSLOD=-0.2905;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:36.09:0,36,386	./.	0/1:24,0:17:0.13:0,0,195	0/0:25,0:12:15.01:0,15,128	./.	./.	./.	./.	./.	1/1:0,4:4:11.95:134,12,0	1/1:4,2:6:9.03:117,9,0	0/0:16,0:16:40.49:0,40,403	0/0:13,0:12:9.78:0,10,133	0/0:12,0:12:3.57:0,4,180	0/0:8,0:8:21.52:0,22,226	0/0:8,0:7:14.46:0,14,157	0/0:14,0:14:26.99:0,27,278	1/1:2,1:3:8.99:98,9,0	./.	./.	./.	0/0:15,0:15:42.11:0,42,451	0/0:6,0:6:12.03:0,12,129	0/0:9,0:9:21.05:0,21,225	1/1:4,3:7:9.03:117,9,0	1/1:3,2:5:12.04:154,12,0	./.	./.
chr10	43467089	.	TC	T	1044.27	PASS	AB=1.000;AC=11;AF=0.324;AN=34;BaseQRankSum=4.650;DP=217;FS=6.101;HRun=5;HaplotypeScore=45.3361;InbreedingCoeff=0.8217;MQ=84.72;MQ0=1;MQRankSum=-0.650;QD=19.70;ReadPosRankSum=-1.566;VQSLOD=2.4368;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:69.20:0,69,920	./.	0/1:16,0:12:12.31:12,0,215	0/0:18,0:11:15.02:0,15,186	./.	./.	./.	./.	./.	1/1:1,11:12:33.09:374,33,0	1/1:1,2:3:6.02:68,6,0	0/0:14,0:14:42.14:0,42,574	0/0:12,0:12:36.11:0,36,474	0/0:13,0:13:36.06:0,36,454	0/0:12,0:12:36.11:0,36,476	0/0:10,0:10:30.09:0,30,395	0/0:21,0:21:63.21:0,63,861	1/1:1,5:6:18.05:204,18,0	./.	./.	./.	0/0:21,0:21:63.19:0,63,838	0/0:4,0:4:12.04:0,12,164	0/0:16,0:16:48.16:0,48,656	1/1:1,3:4:12.01:125,12,0	1/1:0,12:12:36.10:408,36,0	./.	./.
chr10	43468121	.	C	CT	1186.29	PASS	AB=0.803;AC=12;AF=0.353;AN=34;BaseQRankSum=-2.307;DP=344;FS=10.311;HRun=13;HaplotypeScore=78.8703;InbreedingCoeff=0.1246;MQ=80.51;MQ0=0;MQRankSum=0.536;QD=5.87;ReadPosRankSum=-1.161;VQSLOD=1.3285;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:43:65.92:0,66,226	./.	0/1:19,0:16:4.58:5,0,19	0/0:8,0:6:9.58:0,10,43	./.	./.	./.	./.	./.	1/1:5,14:19:21.89:329,22,0	0/1:10,12:22:41.20:170,0,41	0/1:17,3:21:12.05:12,0,207	0/0:10,0:10:17.76:0,18,120	0/0:15,0:17:27.05:0,27,175	0/0:3,0:19:28.49:0,28,82	0/0:7,0:24:26.27:0,26,76	0/0:21,0:21:47.49:0,47,325	1/1:3,10:15:12.13:231,12,0	./.	./.	./.	0/1:23,4:29:7.13:7,0,227	0/1:17,2:20:24.03:24,0,137	0/1:14,1:15:9.20:9,0,149	0/1:3,14:18:2.21:246,0,2	0/1:9,14:24:2.46:281,0,2	./.	./.
chr10	43468540	.	GACACACAC	G	644.16	PASS	AB=0.769;AC=8;AF=0.267;AN=30;BaseQRankSum=2.664;DP=488;FS=12.350;HRun=0;HaplotypeScore=185.1161;InbreedingCoeff=0.4324;MQ=54.59;MQ0=21;MQRankSum=-1.469;QD=6.02;ReadPosRankSum=-2.863;VQSLOD=1.4734;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:38:48.14:0,48,954	./.	./.	./.	./.	./.	./.	./.	./.	1/1:24,5:29:4.14:227,4,0	1/1:12,6:18:2.49:16,2,0	0/0:22,0:22:27.08:0,27,858	0/0:20,0:20:30.99:0,31,965	0/0:24,0:25:39.13:0,39,1171	0/0:27,0:29:48.16:0,48,1383	0/0:17,0:22:29.85:0,30,571	0/0:26,0:33:37.41:0,37,367	0/1:8,6:16:30.51:140,0,31	./.	./.	./.	0/0:25,0:25:11.68:0,12,731	0/0:17,0:14:15.05:0,15,544	0/0:45,0:47:81.28:0,81,2847	1/1:9,5:15:2.82:68,3,0	0/1:23,4:27:43.73:303,0,44	./.	./.
chr10	43468904	.	GA	G	447.87	PASS	AB=0.745;AC=13;AF=0.310;AN=42;BaseQRankSum=4.990;DP=225;FS=99.799;HRun=1;HaplotypeScore=41.2661;InbreedingCoeff=0.3687;MQ=38.81;MQ0=19;MQRankSum=-2.787;QD=10.18;ReadPosRankSum=-2.394;VQSLOD=-0.1070;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:9:11.84:0,12,186	./.	0/0:39,0:5:11.81:0,12,120	0/0:40,0:7:7.12:0,7,110	1/1:0,1:1:2.99:24,3,0	1/1:3,0:2:5.52:25,6,0	./.	./.	1/1:0,2:2:6.01:63,6,0	0/0:7,0:6:13.42:0,13,125	0/0:8,0:4:1.67:0,2,31	0/0:4,0:3:2.80:0,3,13	0/0:6,0:3:9:0,9,117	0/0:7,0:6:14.95:0,15,168	0/1:8,3:11:42.68:43,0,214	0/0:12,0:10:18.06:0,18,287	0/0:7,0:8:12.95:0,13,167	0/0:4,0:2:3.48:0,3,37	./.	./.	1/1:0,9:9:26.93:279,27,0	0/1:4,3:7:54.58:55,0,58	0/1:6,3:8:60.48:60,0,81	0/0:17,0:14:15.15:0,15,240	./.	0/0:7,0:6:8.38:0,8,142	./.	1/1:1,1:1:3.01:39,3,0
chr10	43468911	.	G	GGA	1148.99	PASS	AB=0.736;AC=18;AF=0.429;AN=42;BaseQRankSum=3.590;DP=208;FS=66.981;HRun=0;HaplotypeScore=37.3198;InbreedingCoeff=0.1947;MQ=39.93;MQ0=12;MQRankSum=-2.612;QD=18.53;ReadPosRankSum=0.908;VQSLOD=1.1767;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:6:11.25:0,11,150	./.	0/0:39,0:5:14.42:0,14,140	0/0:40,0:7:9.68:0,10,124	1/1:0,0:1:2.99:23,3,0	1/1:1,1:3:6:83,6,0	1/1:1,0:1:2.99:23,3,0	./.	1/1:0,1:2:5.98:66,6,0	0/0:7,0:6:12.04:0,12,158	0/1:4,1:4:36.89:75,0,37	./.	0/0:5,0:3:9.03:0,9,134	0/0:6,0:5:12.04:0,12,163	0/1:7,3:10:99:154,0,240	0/0:11,0:9:21.07:0,21,332	0/1:5,0:7:29.56:30,0,135	0/0:4,0:2:3.01:0,3,49	./.	./.	1/1:0,7:9:27.07:455,27,0	0/1:4,3:7:94.28:159,0,94	0/1:3,3:6:82.51:161,0,83	0/0:15,0:12:15.04:0,15,244	./.	0/1:4,2:6:30.98:31,0,177	./.	1/1:0,1:1:3.01:36,3,0
chr10	43468995	.	A	AG	2328.17	PASS	AB=0.785;AC=15;AF=0.288;AN=52;BaseQRankSum=10.559;DP=601;FS=18.572;HRun=2;HaplotypeScore=102.7871;InbreedingCoeff=0.1961;MQ=30.04;MQ0=28;MQRankSum=-4.504;QD=10.68;ReadPosRankSum=-1.969;VQSLOD=0.2666;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:23:27.92:0,28,329	0/1:2,3:5:21.85:126,0,22	./.	./.	1/1:7,7:14:6.84:162,7,0	0/1:19,2:21:58.86:59,0,311	0/1:16,11:27:99:331,0,315	0/1:14,21:23:22.82:536,0,23	0/1:18,7:21:99:139,0,258	0/0:29,0:26:65.52:0,66,579	0/0:17,0:16:38.85:0,39,406	0/0:26,0:19:11.19:0,11,301	0/0:24,0:16:32.92:0,33,357	0/0:23,0:15:17.69:0,18,359	0/0:28,0:26:47.96:0,48,533	0/0:29,0:27:57.13:0,57,675	0/0:15,0:12:23.39:0,23,265	0/0:10,0:9:22.87:0,23,204	1/1:7,15:19:5.03:536,5,0	1/1:8,9:15:2.51:356,3,0	0/1:32,1:30:65.25:65,0,360	0/0:69,0:45:48.93:0,49,668	0/0:36,0:30:47.97:0,48,473	0/0:17,0:10:0.30:0,0,13	0/0:12,0:10:6.19:0,6,133	0/0:23,0:17:44.46:0,44,411	0/1:11,2:13:23.25:23,0,93	1/1:3,3:4:12.02:153,12,0
chr10	43469487	.	AGAACC	A	1231.12	PASS	AB=0.948;AC=20;AF=0.370;AN=54;BaseQRankSum=5.590;DP=379;FS=29.996;HRun=0;HaplotypeScore=107.9780;InbreedingCoeff=0.0757;MQ=39.55;MQ0=14;MQRankSum=-6.914;QD=5.28;ReadPosRankSum=-2.003;VQSLOD=0.4753;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:27:99:189,0,553	1/1:3,1:4:6.02:82,6,0	0/1:7,0:1:0:0,0,0	./.	0/1:9,1:10:7.53:8,0,190	1/1:16,0:16:44.54:373,45,0	1/1:10,0:10:14.61:145,15,0	0/1:24,3:27:69.93:70,0,1132	1/1:9,0:9:0.65:222,1,0	0/0:23,0:22:11.41:0,11,975	0/1:16,0:16:6.16:6,0,350	0/0:7,0:7:15.04:0,15,274	0/0:6,0:6:14.97:0,15,316	0/0:13,0:12:30.73:0,31,590	0/1:14,0:13:75.83:76,0,299	0/1:14,0:12:2.27:2,0,436	0/0:21,0:18:40.26:0,40,661	0/0:14,0:14:8.71:0,9,413	0/1:15,1:16:6.51:7,0,687	0/1:8,1:9:3.84:4,0,320	0/0:4,0:4:4.57:0,5,134	0/0:9,0:10:26.70:0,27,497	0/0:10,0:10:17.34:0,17,530	0/0:11,0:10:18.49:0,18,323	0/1:13,1:14:8.14:8,0,535	0/0:21,0:20:27.43:0,27,1044	0/1:20,4:24:80.93:81,0,664	0/1:14,1:9:99:117,0,131
chr10	43469488	.	GAACCAAAAAA	G	1267.21	PASS	AC=8;AF=0.148;AN=54;BaseQRankSum=2.401;DP=382;FS=24.329;HRun=0;HaplotypeScore=146.4955;InbreedingCoeff=0.8521;MQ=39.17;MQ0=14;MQRankSum=-3.876;QD=32.49;ReadPosRankSum=3.484;VQSLOD=1.5459;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:25:39.97:0,40,767	1/1:1,0:4:6.02:93,6,0	0/0:6,0:1:2.98:0,3,21	./.	0/0:10,0:10:23.27:0,23,377	1/1:16,0:16:47.62:668,48,0	1/1:4,6:10:11.60:304,12,0	0/0:28,0:28:77.59:0,78,1118	1/1:9,0:9:9.22:346,9,0	0/0:24,0:23:68.84:0,69,1654	0/0:16,0:16:30.06:0,30,725	0/0:7,0:7:15.05:0,15,574	0/0:6,0:6:15.05:0,15,378	0/0:13,0:12:36.12:0,36,763	0/0:15,0:14:40.84:0,41,636	0/0:15,0:13:36.05:0,36,650	0/0:21,0:18:46:0,46,892	0/0:15,0:15:9.34:0,9,704	0/0:16,0:16:46.20:0,46,692	0/0:9,0:9:24.08:0,24,374	0/0:4,0:4:8.94:0,9,96	0/0:10,0:10:30.10:0,30,701	0/0:10,0:10:30.10:0,30,796	0/0:11,0:10:16.43:0,16,392	0/0:15,0:15:36.11:0,36,850	0/0:21,0:20:57.18:0,57,1751	0/0:23,0:23:46.88:0,47,762	0/0:16,0:10:16.53:0,17,243
chr10	43469522	.	GAACAT	G	648.41	PASS	AB=0.954;AC=15;AF=0.268;AN=56;BaseQRankSum=7.823;DP=477;FS=9.028;HRun=0;HaplotypeScore=145.2768;InbreedingCoeff=-0.3908;MQ=57.60;MQ0=7;MQRankSum=-7.556;QD=2.95;ReadPosRankSum=4.130;VQSLOD=1.9957;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:23,2:26:82.46:82,0,716	0/1:4,0:4:11.62:12,0,100	0/0:41,0:11:11.94:0,12,455	0/0:40,0:12:17.59:0,18,200	0/1:20,0:19:37.99:38,0,558	0/1:9,4:16:99:109,0,379	0/0:9,1:11:2.88:0,3,213	0/0:29,0:27:23.38:0,23,1645	0/1:12,1:13:99:129,0,337	0/0:25,0:25:36.09:0,36,1466	0/0:17,0:17:23.93:0,24,691	0/1:12,0:12:21.97:22,0,446	0/1:9,0:10:67.11:67,0,222	0/0:11,0:11:16.02:0,16,491	0/1:15,0:15:8.99:9,0,510	0/0:12,0:12:14.85:0,15,527	0/1:20,0:20:36.20:36,0,300	0/0:15,0:14:3.31:0,3,381	0/1:14,0:13:27.03:27,0,917	0/1:15,0:15:11.67:12,0,824	0/0:2,0:2:2.90:0,3,16	0/0:12,0:11:27.97:0,28,453	0/1:15,0:15:8.17:8,0,690	0/1:8,0:8:30.49:30,0,184	0/0:16,0:16:14.87:0,15,450	0/0:22,1:23:48.96:0,49,1081	0/1:17,1:18:99:188,0,323	0/1:13,0:14:30.73:31,0,643
chr10	43470102	.	TCTTCTTCTTCTC	T	4791.45	PASS	AB=1.000;AC=36;AF=0.667;AN=54;BaseQRankSum=-3.263;DP=485;FS=13.077;HRun=0;HaplotypeScore=148.6248;InbreedingCoeff=-0.1022;MQ=48.47;MQ0=53;MQRankSum=3.443;QD=10.53;ReadPosRankSum=-5.430;VQSLOD=0.8565;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:21,0:20:29.97:154,0,30	0/0:2,0:1:2.98:0,3,22	0/0:1,0:1:3.01:0,3,32	0/0:2,0:1:3.01:0,3,33	1/1:22,0:20:43.33:344,43,0	1/1:25,0:24:41.02:330,41,0	1/1:24,0:18:26.40:284,26,0	1/1:21,0:5:14.89:106,15,0	./.	0/1:21,0:20:99:218,0,110	1/1:18,0:18:33.11:267,33,0	0/1:12,0:10:27.79:28,0,163	0/1:17,0:16:99:148,0,170	0/1:20,0:20:99:240,0,197	0/1:15,0:14:1.01:146,0,1	0/1:13,0:11:95.53:109,0,96	0/1:27,0:23:99:144,0,214	1/1:11,0:10:23.97:201,24,0	0/1:10,0:6:18.90:19,0,65	1/1:18,0:15:30.86:208,31,0	1/1:18,0:16:26.58:213,27,0	0/1:20,0:18:99:137,0,131	0/1:13,0:13:90.45:118,0,90	0/1:18,0:16:71.35:71,0,118	1/1:15,0:14:27.70:252,28,0	1/1:10,17:24:53.85:492,54,0	1/1:23,0:21:7.58:323,8,0	1/1:26,0:20:25.29:241,25,0
chr10	43470108	.	TCTTCTC	T	5965.21	PASS	AB=1.000;AC=39;AF=0.722;AN=54;BaseQRankSum=-1.979;DP=487;FS=32.598;HRun=0;HaplotypeScore=101.0374;InbreedingCoeff=0.0201;MQ=48.36;MQ0=51;MQRankSum=1.970;QD=13.20;ReadPosRankSum=0.098;VQSLOD=1.8162;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:18:5.35:191,5,0	0/0:2,0:1:2.98:0,3,22	0/0:3,0:1:3.01:0,3,32	0/0:5,0:1:3.01:0,3,33	1/1:23,0:21:58.05:481,58,0	1/1:24,0:23:65.69:553,66,0	1/1:25,0:19:30.82:321,31,0	1/1:23,0:8:23.86:179,24,0	./.	1/1:23,0:22:35.70:391,36,0	1/1:16,0:16:37.38:288,37,0	0/1:14,0:12:86.48:108,0,86	0/1:20,0:19:45.84:234,0,46	0/1:21,0:21:99:266,0,131	1/1:15,0:14:30.54:242,31,0	0/1:13,0:11:88.55:131,0,89	0/1:28,0:23:99:167,0,116	1/1:9,0:8:23.97:201,24,0	0/1:9,0:5:9.22:62,0,9	1/1:17,0:14:37.85:248,38,0	1/1:17,0:15:7.05:177,7,0	0/1:18,0:17:29.13:194,0,29	0/1:13,0:13:36.63:138,0,37	0/1:19,0:17:80.84:117,0,81	1/1:14,0:13:29.76:219,30,0	1/1:25,0:22:38.05:356,38,0	1/1:22,0:20:39.88:397,40,0	1/1:25,0:21:38.48:302,38,0
chr10	43470111	.	TCTC	T	6303.38	PASS	AB=1.000;AC=39;AF=0.722;AN=54;BaseQRankSum=-1.058;DP=468;FS=52.750;HRun=0;HaplotypeScore=75.7158;InbreedingCoeff=0.0032;MQ=48.22;MQ0=41;MQRankSum=0.622;QD=14.80;ReadPosRankSum=1.984;VQSLOD=2.3520;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:18:41.67:300,42,0	0/0:2,0:1:0.89:0,1,2	0/0:5,0:1:3.01:0,3,32	0/0:9,0:1:3.01:0,3,33	1/1:24,0:22:61.31:484,61,0	1/1:24,0:23:65.52:517,66,0	1/1:25,0:19:48.22:362,48,0	1/1:7,8:8:23.86:179,24,0	./.	1/1:22,0:21:56.45:470,56,0	1/1:15,0:15:40.08:315,40,0	0/1:13,0:11:29.26:111,0,29	0/1:20,0:19:19.94:251,0,20	0/1:20,0:20:99:306,0,111	1/1:14,0:13:34.01:258,34,0	0/1:13,0:11:84.60:132,0,85	0/1:27,0:22:87.68:191,0,88	1/1:9,0:8:23.97:201,24,0	0/1:8,0:5:9.79:61,0,10	1/1:16,0:13:33.37:227,33,0	1/1:16,0:14:3.63:160,4,0	0/1:16,0:15:29.19:193,0,29	0/1:12,0:12:13.74:139,0,14	0/1:21,0:19:59.55:176,0,60	1/1:13,0:12:29.79:225,30,0	1/1:22,0:20:34.31:352,34,0	1/1:22,0:20:39.87:394,40,0	1/1:20,0:16:38.37:302,38,0
chr10	43470729	.	T	TTGTG	3443.93	PASS	AB=0.887;AC=29;AF=0.518;AN=56;BaseQRankSum=-0.480;DP=619;FS=8.421;HRun=0;HaplotypeScore=121.7182;InbreedingCoeff=0.5577;MQ=62.49;MQ0=13;MQRankSum=-4.610;QD=10.56;ReadPosRankSum=-3.791;VQSLOD=1.4959;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:35,0:35:5.05:40,5,0	1/1:3,1:3:3.01:72,3,0	1/1:25,0:14:2.99:23,3,0	0/0:32,0:13:3.01:0,3,42	0/1:15,0:15:6.61:7,0,294	1/1:7,11:24:1.42:357,1,0	0/1:15,14:35:90.20:786,0,90	1/1:29,0:29:28.98:280,29,0	1/1:6,20:29:22.66:935,23,0	0/0:19,0:21:35.48:0,35,417	0/0:14,0:14:9.11:0,9,183	0/0:14,0:18:23.51:0,24,442	0/0:24,0:28:23.77:0,24,694	0/0:19,0:18:27.35:0,27,505	1/1:22,0:22:9:200,9,0	1/1:14,0:14:15.05:281,15,0	0/0:34,0:41:59.60:0,60,911	0/1:34,0:34:58.89:59,0,201	1/1:13,0:12:17.09:126,17,0	1/1:6,1:17:5.83:75,6,0	1/1:13,0:13:3.34:16,3,0	0/0:20,0:22:1.58:0,2,466	0/0:19,0:23:23.83:0,24,472	0/0:29,0:34:44.92:0,45,720	0/0:13,0:15:16.59:0,17,342	0/0:22,0:24:11.59:0,12,458	1/1:11,0:11:5.93:82,6,0	1/1:4,0:6:6.02:105,6,0
chr10	43470756	.	T	TGC	1176.91	PASS	AB=0.958;AC=12;AF=0.214;AN=56;BaseQRankSum=4.550;DP=655;FS=1.532;HRun=0;HaplotypeScore=99.2920;InbreedingCoeff=-0.0354;MQ=57.63;MQ0=10;MQRankSum=1.523;QD=4.67;ReadPosRankSum=2.973;VQSLOD=2.5512;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:38,0:38:3.25:3,0,33	0/0:7,0:6:14.23:0,14,123	0/0:28,0:13:20.16:0,20,220	0/0:42,0:14:13.33:0,13,209	0/0:10,0:11:32.93:0,33,406	0/1:24,0:24:55.83:56,0,114	0/0:41,0:41:14.90:0,15,451	0/0:27,0:27:65.70:0,66,508	0/1:35,0:35:37.15:37,0,198	0/1:21,0:20:62.80:99,0,63	0/1:14,0:14:14.55:124,0,15	0/0:23,0:23:35.92:0,36,603	0/0:28,0:28:54.48:0,54,930	0/0:22,0:21:62.70:0,63,724	1/1:20,0:20:10.18:33,10,0	0/1:15,0:15:9.92:22,0,10	0/0:34,0:34:71.43:0,71,1023	0/1:10,26:38:49.69:660,0,50	0/0:20,0:18:44.72:0,45,338	0/0:16,0:16:11.23:0,11,117	0/0:16,0:16:19.57:0,20,137	0/0:24,0:24:70.16:0,70,751	0/0:20,0:20:54.32:0,54,604	0/0:32,0:32:53.90:0,54,873	0/1:17,0:17:45.22:146,0,45	0/1:25,0:25:99:144,0,117	0/0:12,0:12:7.91:0,8,160	0/1:5,0:5:0.76:1,0,55
chr10	43470758	.	T	TGTGTGTGC	1442.53	PASS	AB=0.947;AC=13;AF=0.232;AN=56;BaseQRankSum=4.491;DP=656;FS=0.000;HRun=0;HaplotypeScore=157.3631;InbreedingCoeff=0.0981;MQ=57.86;MQ0=10;MQRankSum=-4.352;QD=5.48;ReadPosRankSum=0.922;VQSLOD=2.1526;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:4,17:44:3.10:13,0,3	0/0:7,0:6:5.17:0,5,110	0/0:28,0:13:33:0,33,297	0/0:40,0:12:17.06:0,17,197	0/0:12,0:12:33.93:0,34,676	0/1:25,0:25:43.43:43,0,190	0/1:41,0:41:71.62:72,0,479	0/1:28,0:28:50.11:50,0,267	0/1:35,0:35:92.22:92,0,242	0/0:20,0:19:53.94:0,54,942	0/0:15,0:15:38.94:0,39,520	0/0:23,0:23:54.02:0,54,937	0/0:29,0:29:78.99:0,79,1526	0/0:21,0:20:59.97:0,60,1086	1/1:0,13:23:5.73:470,6,0	1/1:3,12:17:14.73:547,15,0	0/0:33,0:33:93.12:0,93,1875	0/0:34,0:34:23.24:0,23,810	0/1:18,0:16:20.01:20,0,199	0/1:15,0:15:96.65:120,0,97	0/0:16,0:16:19.44:0,19,139	0/0:23,0:23:63.85:0,64,1098	0/0:20,0:20:55.91:0,56,1011	0/0:32,0:32:78.27:0,78,1486	0/0:16,0:16:31.50:0,31,682	0/0:24,0:24:65.54:0,66,1103	0/1:12,0:12:19.25:19,0,125	0/1:5,0:5:51.83:155,0,52
chr10	43472292	.	G	GTTT	8214.23	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=2.972;DP=539;FS=25.793;HRun=10;HaplotypeScore=105.4921;InbreedingCoeff=0.9226;MQ=66.86;MQ0=5;MQRankSum=-6.405;QD=22.26;ReadPosRankSum=-3.319;VQSLOD=0.8240;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,25:36:69.21:1203,69,0	1/1:6,0:6:5.81:50,6,0	0/0:29,0:14:19:0,19,182	0/0:17,0:9:7.46:0,7,87	1/1:15,5:22:51.45:616,51,0	1/1:6,1:20:16.09:340,16,0	1/1:8,0:19:17.99:245,18,0	1/1:24,0:29:58.12:534,58,0	1/1:11,0:11:5.21:105,5,0	1/1:5,19:22:48.08:789,48,0	1/1:4,9:15:26.76:407,27,0	0/0:17,0:17:33:0,33,387	0/0:17,0:17:36.07:0,36,438	0/0:11,0:11:17.37:0,17,196	1/1:5,5:11:12.04:231,12,0	1/1:4,5:11:15.05:274,15,0	0/0:31,0:31:84.10:0,84,970	1/1:9,17:29:41.33:804,41,0	1/1:17,0:35:42.63:649,43,0	1/1:18,0:19:15.96:215,16,0	1/1:2,0:10:9.44:69,9,0	0/0:19,0:19:45.06:0,45,537	0/0:16,0:16:32.85:0,33,401	0/0:10,0:10:14.97:0,15,182	1/1:5,10:17:27.02:463,27,0	1/1:8,14:26:57.05:840,57,0	1/1:15,0:16:15.03:194,15,0	1/1:8,0:9:17.98:187,18,0
chr10	43472296	.	T	TTTTTTTTTC	6716.35	PASS	AB=1.000;AC=27;AF=0.482;AN=56;BaseQRankSum=0.160;DP=534;FS=19.310;HRun=0;HaplotypeScore=157.5751;InbreedingCoeff=0.3657;MQ=62.51;MQ0=6;MQRankSum=-8.017;QD=18.66;ReadPosRankSum=-3.572;VQSLOD=1.7740;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:37,0:37:49.54:149,0,50	1/1:4,0:4:4.04:86,4,0	0/0:31,0:12:24.34:0,24,187	0/0:19,0:8:4.34:0,4,114	1/1:20,1:21:51.63:1000,52,0	0/1:20,0:20:27.31:227,0,27	1/1:17,0:17:19.61:254,20,0	1/1:29,0:28:41.61:959,42,0	0/1:7,0:7:31.76:79,0,32	0/1:26,0:24:22.52:133,0,23	0/1:15,0:15:0.15:92,0,0	0/0:15,0:15:39.07:0,39,732	0/0:14,0:14:39.10:0,39,744	0/0:11,0:11:20.41:0,20,415	0/0:9,0:9:5.14:0,5,21	0/1:11,0:11:6.24:6,0,21	0/0:31,0:31:87.22:0,87,1808	0/1:28,0:28:17.94:114,0,18	1/1:37,0:35:62.27:1379,62,0	1/1:7,9:27:34.74:864,35,0	1/1:9,0:9:9.50:135,9,0	0/0:19,0:18:48.12:0,48,1028	0/0:15,0:15:36.07:0,36,767	0/0:10,0:10:17.99:0,18,426	0/1:16,0:15:2.38:28,0,2	0/1:26,0:26:41.83:146,0,42	1/1:5,11:22:15.05:516,15,0	1/1:7,1:8:24.03:550,24,0
chr10	43472442	.	AGTGTGTGT	A	963.23	PASS	AB=0.890;AC=23;AF=0.500;AN=46;BaseQRankSum=3.074;DP=450;FS=20.905;HRun=0;HaplotypeScore=111.1453;InbreedingCoeff=0.3851;MQ=55.89;MQ0=9;MQRankSum=-4.707;QD=3.98;ReadPosRankSum=-1.807;VQSLOD=0.5024;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:40,0:43:12.04:223,12,0	0/0:5,0:5:0:0,0,0	./.	0/0:24,0:10:0:0,0,1	0/1:10,0:10:0:0,0,0	0/0:18,0:19:15:0,15,148	0/0:10,0:10:8.96:0,9,69	1/1:27,0:24:2:6,2,0	1/1:6,1:7:3.01:74,3,0	1/1:18,1:18:5.70:126,6,0	1/1:11,7:18:6.02:149,6,0	0/0:13,0:16:9:0,9,91	0/0:10,0:10:2.99:0,3,24	0/1:8,1:9:30.13:60,0,30	1/1:6,0:10:3.01:56,3,0	./.	0/1:24,1:29:37.14:78,0,37	0/0:16,0:16:3.90:0,4,44	1/1:22,2:23:2.24:72,2,0	1/1:13,4:17:2.78:74,3,0	./.	0/0:21,0:21:2.05:0,2,163	0/0:11,0:11:15:0,15,156	0/0:15,0:20:18.01:0,18,205	1/1:7,2:10:6.02:130,6,0	1/1:16,0:16:2.88:55,3,0	./.	./.
chr10	43474261	.	AAAAT	A	5972.96	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=13.718;DP=706;FS=2.131;HRun=0;HaplotypeScore=113.1050;InbreedingCoeff=0.9989;MQ=70.37;MQ0=0;MQRankSum=-1.330;QD=36.87;ReadPosRankSum=-1.188;VQSLOD=4.9652;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,141,3352	0/0:14,0:14:39.13:0,39,906	0/0:22,0:19:51.13:0,51,1103	0/0:17,0:17:21.28:0,21,796	1/1:0,24:24:63.21:1011,63,0	0/0:22,0:22:57.20:0,57,1356	0/0:28,0:28:78.27:0,78,1835	1/1:2,22:24:66.21:1064,66,0	0/0:20,0:20:45.15:0,45,1105	0/0:34,0:34:90.30:0,90,2067	0/0:25,0:25:66.23:0,66,1535	0/0:26,0:26:75.26:0,75,1729	0/0:22,0:22:63.21:0,63,1301	0/0:20,0:20:57.18:0,57,1281	0/0:29,0:29:78.27:0,78,1796	0/0:34,0:34:99:0,99,2168	0/0:19,0:19:57.20:0,57,1242	0/0:26,0:26:69.22:0,69,1628	1/1:2,15:17:45.14:743,45,0	1/1:3,14:17:39.12:635,39,0	1/1:1,35:36:57.20:1021,57,0	0/0:34,0:34:96.33:0,96,2242	0/0:29,0:29:78.20:0,78,1752	0/0:28,0:28:84.24:0,84,1973	0/0:24,0:24:66.23:0,66,1601	0/0:21,0:21:60.21:0,60,1286	1/1:1,32:33:59.81:1066,60,0	1/1:1,10:11:24.08:433,24,0
chr10	43475189	.	AGTTAGTGATGGAGGAGGCTGGGGCTGGAGAGATGGCTCAGAG	A	6203.29	PASS	AB=0.857;AC=31;AF=0.620;AN=50;BaseQRankSum=4.899;DP=396;FS=0.761;HRun=0;HaplotypeScore=390.8519;InbreedingCoeff=0.6354;MQ=71.84;MQ0=0;MQRankSum=-5.678;QD=30.26;ReadPosRankSum=2.675;VQSLOD=2.3415;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:27,8:35:6.02:522,6,0	1/1:1,3:4:5.98:336,6,0	0/0:20,0:20:44.51:0,45,2254	0/0:19,0:18:38.61:0,39,1860	./.	1/1:8,2:10:3.01:316,3,0	1/1:14,0:14:6.01:70,6,0	1/1:17,0:17:6.02:113,6,0	1/1:13,5:18:9.03:948,9,0	./.	1/1:5,0:5:3.01:51,3,0	0/0:15,0:15:39.13:0,39,5383	0/0:12,0:12:30.10:0,30,4608	0/0:18,0:18:39.13:0,39,5685	1/1:8,5:13:9.03:948,9,0	1/1:11,3:13:9.03:948,9,0	0/0:34,0:34:87.30:0,87,11801	0/1:5,1:6:99:310,0,409	./.	1/1:6,0:6:3.01:51,3,0	1/1:18,0:18:6.02:96,6,0	0/0:9,0:9:12.04:0,12,1332	0/0:12,0:12:30.10:0,30,3379	0/0:32,0:32:69.24:0,69,10329	1/1:14,2:16:3.01:316,3,0	1/1:6,0:6:3:27,3,0	1/1:13,5:18:9.03:837,9,0	1/1:3,2:5:3.01:316,3,0
chr10	43475230	.	AG	A	302.26	PASS	AB=1.000;AC=33;AF=0.635;AN=52;BaseQRankSum=6.364;DP=232;FS=0.000;HRun=2;HaplotypeScore=66.8063;InbreedingCoeff=0.6481;MQ=92.26;MQ0=3;MQRankSum=-4.775;QD=6.05;ReadPosRankSum=-0.098;VQSLOD=0.4151;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,0:8:2.22:7,2,0	1/1:3,0:3:5.19:27,5,0	0/0:33,0:27:75.97:0,76,1063	0/0:29,0:24:60.17:0,60,803	1/1:2,0:2:5.99:50,6,0	1/1:2,0:2:2.22:7,2,0	1/1:1,0:1:2.99:24,3,0	1/1:3,0:3:9.01:84,9,0	1/1:5,0:5:6.66:22,7,0	1/1:2,0:2:6.01:65,6,0	1/1:0,1:1:2.94:18,3,0	0/0:17,0:17:51.16:0,51,740	0/0:14,0:14:42.04:0,42,577	0/0:15,0:15:45.15:0,45,674	1/1:5,0:5:6.66:22,7,0	1/1:3,0:3:6.66:22,7,0	0/0:27,0:27:81.21:0,81,1151	0/1:2,0:2:1.94:2,0,40	1/1:0,2:2:6:53,6,0	./.	./.	0/0:7,0:7:21.07:0,21,312	0/0:9,0:9:27.08:0,27,385	0/0:30,0:30:87.25:0,87,1274	1/1:2,0:2:2.22:7,2,0	1/1:0,2:2:6:51,6,0	1/1:5,0:5:4.44:14,4,0	1/1:2,0:2:2.22:7,2,0
chr10	43475357	.	C	CTG	19741.79	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-16.132;DP=636;FS=1.511;HRun=0;HaplotypeScore=72.9305;InbreedingCoeff=0.9996;MQ=74.98;MQ0=3;MQRankSum=-4.602;QD=44.26;ReadPosRankSum=2.459;VQSLOD=6.4803;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,42:46:93.32:1734,93,0	1/1:0,10:8:24.08:449,24,0	0/0:19,0:19:51.03:0,51,691	0/0:27,0:26:65.33:0,65,785	1/1:1,25:28:45.15:842,45,0	1/1:1,22:23:60.21:1122,60,0	1/1:1,23:24:57.20:1066,57,0	1/1:2,27:30:81.20:1410,81,0	1/1:1,17:18:51.17:952,51,0	1/1:2,32:35:99:1756,99,0	1/1:0,20:20:48.16:898,48,0	0/0:16,0:16:48.13:0,48,668	0/0:14,0:14:42.14:0,42,618	0/0:15,0:15:45.10:0,45,619	1/1:1,19:21:45.15:841,45,0	1/1:1,15:16:36.12:673,36,0	0/0:25,0:25:75.23:0,75,1077	1/1:1,29:30:69.24:1290,69,0	1/1:1,13:14:35.32:594,35,0	1/1:1,26:27:69.24:1291,69,0	1/1:1,22:23:51.17:954,51,0	0/0:25,0:25:75.19:0,75,1007	0/0:19,0:19:54.14:0,54,736	0/0:30,0:30:81.26:0,81,1169	1/1:0,19:19:48.16:898,48,0	1/1:0,23:23:63.18:1102,63,0	1/1:1,24:27:69.24:1290,69,0	1/1:1,11:11:33.06:580,33,0
chr10	43476202	.	AT	A	4941.64	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=-2.194;DP=573;FS=9.399;HRun=2;HaplotypeScore=75.7056;InbreedingCoeff=0.8724;MQ=75.18;MQ0=0;MQRankSum=-0.571;QD=29.95;ReadPosRankSum=-0.381;VQSLOD=3.3292;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,129,1795	0/0:14,0:14:32.97:0,33,119	0/0:17,0:16:38.03:0,38,473	0/0:11,0:11:30.04:0,30,382	1/1:1,27:28:72.08:887,72,0	0/0:10,0:10:1.84:0,2,59	0/0:25,0:25:15.77:0,16,155	1/1:1,28:29:84.20:1016,84,0	0/1:19,0:19:56.92:57,0,76	0/0:34,0:34:99:0,102,1387	0/0:20,0:20:60.18:0,60,817	0/0:18,0:18:54.18:0,54,762	0/0:22,0:22:63.20:0,63,861	0/0:17,0:17:51.09:0,51,615	0/0:18,0:18:51.16:0,51,703	0/0:15,0:15:41.73:0,42,561	0/0:18,0:18:53.73:0,54,677	0/0:28,0:28:81.23:0,81,1106	1/1:1,19:20:56.72:699,57,0	1/1:0,14:14:42.14:541,42,0	1/1:0,14:14:27.09:348,27,0	0/0:17,0:17:51.14:0,51,700	0/0:20,0:20:60.16:0,60,794	0/0:15,0:15:42.08:0,42,523	0/0:16,0:16:48.13:0,48,630	0/0:27,0:27:81.26:0,81,1130	1/1:1,23:24:56.92:735,57,0	1/1:0,17:17:51.17:659,51,0
chr10	43476290	.	ACTTC	A	3527.46	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=12.247;DP=619;FS=0.000;HRun=0;HaplotypeScore=107.9239;InbreedingCoeff=0.9873;MQ=85.97;MQ0=0;MQRankSum=-4.943;QD=42.50;ReadPosRankSum=3.712;VQSLOD=4.0308;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,38:42:93.32:1673,93,0	0/0:7,0:7:21.07:0,21,548	0/0:21,0:21:33.83:0,34,1001	0/0:22,0:22:54.17:0,54,1238	0/0:24,0:24:66.18:0,66,1666	0/0:17,0:17:51.16:0,51,1274	0/0:35,0:35:96.32:0,96,2426	0/0:38,0:38:99:0,99,2495	0/0:19,0:19:48.16:0,48,1205	0/0:24,0:24:66.22:0,66,1604	0/0:12,0:12:33.11:0,33,864	0/0:19,0:19:54.19:0,54,1414	0/0:16,0:16:42.09:0,42,953	0/0:28,0:28:75.25:0,75,1858	1/1:2,18:20:51.17:927,51,0	1/1:1,20:21:51.17:927,51,0	0/0:29,0:29:84.26:0,84,2138	0/0:21,0:21:63.19:0,63,1575	0/0:24,0:24:54.18:0,54,1327	0/0:18,0:18:45.15:0,45,1159	0/0:32,0:32:84.29:0,84,2198	0/0:13,0:13:33.11:0,33,861	0/0:14,0:14:42.14:0,42,1073	0/0:22,0:22:66.23:0,66,1723	0/0:14,0:13:39.13:0,39,1021	0/0:38,0:38:99:0,111,2851	0/0:24,0:24:72.24:0,72,1823	0/0:4,0:4:12.03:0,12,261
chr10	43477081	.	TCACACA	T	619.15	PASS	AB=0.775;AC=11;AF=0.212;AN=52;BaseQRankSum=6.131;DP=479;FS=2.549;HRun=0;HaplotypeScore=111.6450;InbreedingCoeff=0.4140;MQ=67.63;MQ0=9;MQRankSum=-1.747;QD=7.37;ReadPosRankSum=-0.539;VQSLOD=2.3189;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:33:34.37:0,34,518	0/0:8,0:8:12.04:0,12,287	./.	./.	0/0:12,0:14:11.08:0,11,243	1/1:11,0:11:0.88:2,1,0	0/0:17,0:19:4.27:0,4,64	0/0:23,0:23:18.02:0,18,344	0/1:9,1:13:39.80:54,0,40	1/1:5,2:8:9.03:139,9,0	1/1:2,4:6:3.01:46,3,0	0/0:14,0:14:21.06:0,21,490	0/0:12,0:14:20.16:0,20,559	0/0:16,0:18:20.08:0,20,615	0/0:19,0:20:21.07:0,21,556	0/0:8,0:10:9.03:0,9,115	0/0:31,0:33:52.45:0,52,1424	0/1:14,4:19:45.12:205,0,45	0/0:7,0:7:9.03:0,9,201	0/0:9,0:8:3.01:0,3,77	0/0:33,0:28:11.85:0,12,303	0/0:19,0:20:33.08:0,33,707	0/0:11,0:11:11.96:0,12,199	0/0:31,0:36:41.25:0,41,864	0/1:7,2:10:11.93:151,0,12	1/1:14,3:17:9.03:160,9,0	0/0:13,0:13:18.06:0,18,431	0/0:9,0:9:12.04:0,12,323
chr10	43477574	.	C	CAT	18047.32	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-9.951;DP=539;FS=3.248;HRun=0;HaplotypeScore=68.0878;InbreedingCoeff=0.9964;MQ=75.52;MQ0=1;MQRankSum=-3.303;QD=46.28;ReadPosRankSum=-0.049;VQSLOD=6.0747;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,24:36:84.23:1447,84,0	1/1:1,6:7:15.05:270,15,0	0/0:9,0:10:20.77:0,21,227	0/0:18,0:18:40.89:0,41,463	1/1:2,20:22:63.22:1124,63,0	1/1:2,17:19:51.17:919,51,0	1/1:0,17:17:42.62:757,43,0	1/1:2,31:33:93.32:1675,93,0	1/1:0,17:17:51.17:918,51,0	1/1:2,26:28:78.24:1338,78,0	1/1:2,15:17:45.15:810,45,0	0/0:20,0:20:56.82:0,57,797	0/0:12,0:12:36.12:0,36,504	0/0:20,0:20:54.17:0,54,740	1/1:3,17:20:57.20:1012,57,0	1/1:4,13:16:45.14:776,45,0	0/0:21,0:21:60.20:0,60,838	1/1:2,20:22:63.22:1134,63,0	1/1:5,21:28:72.18:1210,72,0	1/1:3,14:17:36.12:616,36,0	1/1:2,16:18:42.14:756,42,0	0/0:14,0:14:39.12:0,39,530	0/0:14,0:14:33.11:0,33,462	0/0:20,0:20:57.19:0,57,798	1/1:0,11:11:33.11:594,33,0	1/1:1,23:24:69.24:1233,69,0	1/1:1,21:21:57.20:1027,57,0	1/1:4,10:14:24.08:432,24,0
chr10	43477598	.	T	TC	1451.81	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=1.218;DP=514;FS=2.726;HRun=7;HaplotypeScore=100.4652;InbreedingCoeff=0.9759;MQ=68.92;MQ0=1;MQRankSum=-6.981;QD=21.04;ReadPosRankSum=-0.318;VQSLOD=2.6452;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:9,26:34:51.07:583,51,0	0/0:4,0:4:9.01:0,9,87	0/0:17,0:17:41.27:0,41,373	0/0:19,0:19:54.08:0,54,518	0/0:23,0:23:56.89:0,57,490	0/0:21,0:21:60.08:0,60,573	0/0:25,0:25:60.55:0,61,572	0/0:18,0:18:36.04:0,36,344	0/0:18,0:18:51.05:0,51,485	0/0:25,0:25:69.11:0,69,666	0/0:14,0:14:39.05:0,39,370	0/0:20,0:20:54.08:0,54,521	0/0:11,0:11:30.05:0,30,290	0/0:20,0:20:54.08:0,54,521	1/1:2,17:19:45.14:543,45,0	1/1:0,15:14:39.12:469,39,0	0/0:19,0:19:51.08:0,51,492	0/0:23,0:23:63.10:0,63,608	0/0:25,0:24:63.08:0,63,602	0/0:13,0:13:33.05:0,33,318	0/0:17,0:17:42.06:0,42,405	0/0:13,0:13:39.06:0,39,376	0/0:9,0:9:27.04:0,27,261	0/0:23,0:23:63.04:0,63,599	0/0:15,0:15:36.06:0,36,348	0/0:28,0:28:81.13:0,81,782	0/0:18,0:17:48.08:0,48,463	0/0:7,0:7:18.03:0,18,174
chr10	43477606	.	T	TAC	695.28	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-0.373;DP=526;FS=0.000;HRun=0;HaplotypeScore=108.1685;InbreedingCoeff=0.7978;MQ=71.78;MQ0=1;MQRankSum=-3.099;QD=28.97;ReadPosRankSum=-0.706;VQSLOD=4.8258;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:57.17:0,57,679	0/0:4,0:4:12.04:0,12,150	0/0:21,0:21:41.82:0,42,506	0/0:26,0:26:62.91:0,63,715	1/1:6,17:24:47.86:790,48,0	0/0:19,1:20:1.64:0,2,551	0/0:24,0:25:59.94:0,60,725	0/0:21,0:21:39.11:0,39,477	0/0:18,0:18:54.17:0,54,676	0/0:26,0:26:69.22:0,69,863	0/0:16,0:16:45.14:0,45,563	0/0:21,0:21:53.80:0,54,675	0/0:12,0:12:36.11:0,36,450	0/0:18,0:18:45.14:0,45,563	0/0:17,0:17:45.13:0,45,533	0/0:16,0:15:42.13:0,42,494	0/0:18,0:18:45.13:0,45,550	0/0:24,0:24:66.17:0,66,808	0/0:22,0:22:60.02:0,60,725	0/0:12,0:12:33.09:0,33,400	0/0:16,0:16:33.10:0,33,413	0/0:14,0:14:39.12:0,39,487	0/0:9,0:9:24.08:0,24,300	0/0:27,0:27:78.25:0,78,976	0/0:13,0:13:36.11:0,36,450	0/0:29,0:29:75.22:0,75,913	0/0:18,0:17:51.16:0,51,634	0/0:8,0:8:21.07:0,21,262
chr10	43477971	.	C	CG	1401.33	PASS	AB=0.938;AC=23;AF=0.442;AN=52;BaseQRankSum=6.292;DP=287;FS=0.688;HRun=1;HaplotypeScore=51.7224;InbreedingCoeff=0.8362;MQ=45.04;MQ0=18;MQRankSum=-3.904;QD=12.51;ReadPosRankSum=-0.734;VQSLOD=1.7670;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:12:13.67:0,14,60	1/1:1,3:4:8.93:82,9,0	./.	./.	1/1:16,0:16:18:173,18,0	1/1:2,6:8:21.06:284,21,0	1/1:4,1:5:11.91:104,12,0	1/1:8,0:6:11.93:105,12,0	1/1:6,5:10:21.02:248,21,0	0/0:13,0:13:35.91:0,36,361	0/0:10,0:9:23.92:0,24,238	0/0:13,0:13:33.08:0,33,393	0/0:10,0:10:17.64:0,18,200	0/0:7,0:6:17.83:0,18,172	0/0:4,0:4:6.88:0,7,54	0/0:3,0:3:4.82:0,5,33	0/0:22,0:22:54.06:0,54,615	0/1:14,1:15:3.95:4,0,340	1/1:8,1:8:15:148,15,0	1/1:9,1:10:20.69:188,21,0	1/1:7,0:5:2.99:24,3,0	0/0:4,0:4:9.02:0,9,104	0/0:11,0:10:23.96:0,24,238	0/0:15,0:15:33:0,33,386	0/0:15,0:15:41.98:0,42,411	0/0:13,0:13:33.06:0,33,381	1/1:10,1:11:17.90:158,18,0	1/1:8,0:8:9.01:86,9,0
chr10	43477972	.	G	GGA	1992.44	PASS	AB=0.911;AC=29;AF=0.537;AN=54;BaseQRankSum=8.319;DP=349;FS=9.375;HRun=0;HaplotypeScore=79.9334;InbreedingCoeff=0.6586;MQ=47.95;MQ0=18;MQRankSum=-5.265;QD=10.77;ReadPosRankSum=-2.618;VQSLOD=1.6877;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,0:17:2.79:121,3,0	1/1:4,0:4:8.89:59,9,0	1/1:17,0:3:0.47:1,0,0	./.	1/1:14,3:18:26.84:261,27,0	1/1:8,0:8:20.89:168,21,0	1/1:8,1:9:14.83:100,15,0	1/1:5,4:8:14.95:192,15,0	1/1:12,0:10:20.89:159,21,0	0/0:15,0:15:35.89:0,36,440	0/0:10,0:9:23.97:0,24,278	0/0:15,0:14:32.64:0,33,470	0/0:12,0:12:4.47:0,4,214	0/0:8,0:7:17.81:0,18,197	0/1:6,0:5:31.39:31,0,40	0/1:5,0:4:19.18:20,0,19	0/0:31,0:30:54.37:0,54,734	0/1:15,0:15:13.24:13,0,417	1/1:12,1:11:20.86:224,21,0	1/1:12,2:15:26.69:264,27,0	1/1:5,1:4:2.99:24,3,0	0/0:6,0:6:8.17:0,8,120	0/0:11,0:10:23.60:0,24,234	0/0:16,0:16:32.94:0,33,469	0/0:16,0:16:41.99:0,42,466	0/0:16,0:16:35.99:0,36,474	1/1:4,10:13:17.92:308,18,0	1/1:3,6:10:15.04:247,15,0
chr10	43477987	.	CAA	C	1056.56	PASS	AB=0.768;AC=24;AF=0.429;AN=56;BaseQRankSum=-0.923;DP=381;FS=3.652;HRun=17;HaplotypeScore=59.0485;InbreedingCoeff=0.4112;MQ=62.87;MQ0=18;MQRankSum=-1.965;QD=6.36;ReadPosRankSum=2.619;VQSLOD=-0.4876;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,8:18:19.51:148,20,0	0/1:4,0:4:26.48:26,0,29	0/0:45,0:14:23.63:0,24,169	0/0:23,0:7:5.30:0,5,33	0/1:7,4:15:4.72:5,0,35	0/1:5,5:11:3.37:58,0,3	1/1:3,5:9:3.81:64,4,0	0/0:10,2:19:6.59:0,7,109	0/1:6,4:9:12.39:68,0,12	1/1:4,9:14:29.42:214,29,0	1/1:5,4:10:8.49:98,8,0	0/0:16,0:15:28.46:0,28,298	0/0:12,0:14:23.34:0,23,223	0/0:6,0:7:8.44:0,8,51	1/1:4,4:6:8.86:69,9,0	1/1:1,7:5:11.97:95,12,0	0/0:26,1:30:50.99:0,51,477	1/1:3,7:11:13.88:124,14,0	0/0:2,0:9:2.84:0,3,43	0/1:9,3:13:35.88:92,0,36	0/0:3,0:2:2.84:0,3,10	0/0:6,0:6:14.78:0,15,164	0/1:3,1:6:11.73:12,0,92	0/0:17,0:17:24.02:0,24,273	1/1:4,5:9:8.84:71,9,0	1/1:8,4:14:8.49:98,8,0	0/0:9,1:12:0.94:0,1,35	0/0:6,0:8:3.62:0,4,12
chr10	43478206	.	T	TCC	3170.38	PASS	AB=1.000;AC=8;AF=0.143;AN=56;BaseQRankSum=-9.411;DP=594;FS=6.501;HRun=5;HaplotypeScore=125.1543;InbreedingCoeff=0.6641;MQ=73.38;MQ0=0;MQRankSum=-2.006;QD=29.09;ReadPosRankSum=-1.111;VQSLOD=2.2291;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,36:38:90.31:1574,90,0	0/0:8,0:8:18.60:0,19,145	0/0:20,0:18:32.04:0,32,299	0/0:23,0:22:35.50:0,35,483	0/0:27,0:27:4.15:0,4,331	0/0:26,0:26:49.78:0,50,440	0/0:24,0:24:59.46:0,59,410	0/0:20,0:20:27:0,27,192	0/0:13,0:13:11.92:0,12,188	0/0:29,0:28:5.07:0,5,301	0/0:19,0:19:47.20:0,47,342	0/0:22,0:22:49.51:0,50,353	0/0:16,0:16:44.64:0,45,324	0/0:18,0:18:46.28:0,46,330	1/1:1,19:20:51.17:891,51,0	1/1:1,21:22:48.16:839,48,0	0/0:36,0:36:96.30:0,96,1218	0/0:15,0:15:32.55:0,33,218	0/0:12,0:12:29.51:0,30,184	0/0:13,0:13:27.67:0,28,193	0/0:21,0:21:59.32:0,59,401	0/0:16,0:16:8.70:0,9,205	0/1:14,0:14:8.25:8,0,146	0/0:33,0:33:86.90:0,87,606	0/1:15,0:15:6.41:6,0,215	0/0:28,0:28:57.65:0,58,438	0/0:29,0:29:77.89:0,78,565	0/0:17,0:17:47.68:0,48,344
chr10	43478609	.	TGGTTC	T	674.42	PASS	AB=0.967;AC=13;AF=0.232;AN=56;BaseQRankSum=3.179;DP=398;FS=7.451;HRun=0;HaplotypeScore=89.6699;InbreedingCoeff=0.0479;MQ=54.76;MQ0=10;MQRankSum=-2.401;QD=4.62;ReadPosRankSum=-3.128;VQSLOD=0.1957;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:34,0:30:15.23:220,15,0	0/0:8,0:8:9.30:0,9,295	0/0:12,0:7:11.72:0,12,114	0/1:10,1:10:44.03:44,0,93	0/0:8,8:15:17.44:0,17,367	0/0:14,0:14:39.13:0,39,794	0/0:15,0:14:26.60:0,27,623	0/1:17,0:15:99:140,0,677	0/1:13,0:13:30.60:31,0,526	0/0:16,0:15:32.50:0,32,806	0/0:10,0:10:26.91:0,27,542	0/0:21,0:21:36.42:0,36,903	0/0:13,0:13:33.11:0,33,649	0/0:15,0:15:42.01:0,42,806	0/1:11,0:11:49.47:49,0,78	1/1:6,0:6:6.11:17,6,0	0/0:21,0:19:29.93:0,30,1078	0/0:20,0:20:40.88:0,41,918	0/1:9,1:10:33.88:34,0,510	0/1:10,0:8:63.23:63,0,276	0/1:6,1:6:25.07:25,0,177	0/0:9,0:9:23.90:0,24,482	0/0:8,0:6:18.06:0,18,381	0/0:24,0:24:57.18:0,57,1328	0/0:10,0:10:17.40:0,17,410	0/0:20,0:20:9.92:0,10,973	0/1:11,0:11:21.45:21,0,441	0/1:16,0:15:99:190,0,408
chr10	43478611	.	GTTC	G	931.20	PASS	AB=0.908;AC=8;AF=0.143;AN=56;BaseQRankSum=3.085;DP=392;FS=14.771;HRun=0;HaplotypeScore=75.4111;InbreedingCoeff=0.3215;MQ=49.81;MQ0=10;MQRankSum=-3.083;QD=10.23;ReadPosRankSum=-1.950;VQSLOD=1.0023;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,23:29:42.70:559,43,0	0/0:8,0:8:17.83:0,18,282	0/1:8,0:4:15.09:16,0,15	0/0:8,0:7:5.51:0,6,84	0/0:16,0:15:18.06:0,18,396	0/0:14,0:14:39.13:0,39,741	0/0:17,0:16:38.97:0,39,668	0/0:18,0:16:0.50:0,1,657	0/0:13,0:13:2.96:0,3,459	0/1:16,0:15:3.33:3,0,656	0/0:9,0:9:21.96:0,22,453	0/0:18,0:18:19.39:0,19,746	0/0:14,0:14:36.12:0,36,670	0/0:15,0:15:42.08:0,42,706	0/1:5,7:12:45.23:327,0,45	1/1:0,6:6:9.03:153,9,0	0/0:21,0:19:34.40:0,34,934	0/0:20,0:20:45.06:0,45,780	0/0:10,0:10:8.64:0,9,422	0/0:11,0:9:18.43:0,18,353	0/0:7,0:6:7.58:0,8,161	0/0:10,0:10:26.77:0,27,417	0/0:8,0:7:21.06:0,21,358	0/0:24,0:24:57.65:0,58,1086	0/0:9,0:10:17.91:0,18,310	0/0:18,0:18:47.83:0,48,856	0/0:12,0:12:7.61:0,8,418	0/1:16,0:15:6.51:7,0,389
chr10	43479385	.	AT	A	1078.69	PASS	AB=0.975;AC=16;AF=0.286;AN=56;BaseQRankSum=2.580;DP=483;FS=0.000;HRun=3;HaplotypeScore=74.4375;InbreedingCoeff=0.4696;MQ=70.46;MQ0=0;MQRankSum=0.125;QD=5.71;ReadPosRankSum=-3.399;VQSLOD=-0.7265;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:47.91:0,48,451	1/1:11,0:11:19.87:82,20,0	0/0:11,0:11:22.79:0,23,244	0/0:13,0:13:9.96:0,10,165	0/1:15,1:16:28.91:69,0,29	1/1:20,0:20:39.92:211,40,0	1/1:9,0:9:24.69:118,25,0	1/1:24,3:27:3.07:256,3,0	1/1:11,0:11:16.56:84,17,0	0/0:17,0:17:48.16:0,48,672	0/0:14,0:14:18.61:0,19,434	0/0:13,0:13:39.13:0,39,544	0/0:18,0:18:51.13:0,51,650	0/0:12,0:12:33.09:0,33,440	0/0:22,0:22:42.55:0,43,518	0/0:15,0:15:42.03:0,42,395	0/0:27,0:27:81.24:0,81,1097	0/0:20,0:20:60.15:0,60,795	0/1:27,1:28:2.65:228,0,3	0/1:10,0:10:18.22:47,0,18	0/1:12,0:12:17.03:39,0,17	0/0:12,0:12:30.08:0,30,395	0/0:23,0:24:63.14:0,63,841	0/0:20,0:20:60.10:0,60,761	0/0:11,0:11:27.08:0,27,371	0/0:22,0:22:66.19:0,66,883	0/1:28,0:28:51.23:51,0,81	0/1:16,1:17:52.60:77,0,53
chr10	43479387	.	T	TAA	845.93	PASS	AB=0.941;AC=9;AF=0.161;AN=56;BaseQRankSum=5.482;DP=489;FS=5.693;HRun=0;HaplotypeScore=88.1783;InbreedingCoeff=0.8984;MQ=70.35;MQ0=0;MQRankSum=-0.446;QD=12.08;ReadPosRankSum=-1.115;VQSLOD=2.8929;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:35.63:0,36,287	1/1:1,9:11:24.07:319,24,0	0/0:11,0:11:28.89:0,29,302	0/0:13,0:13:9.91:0,10,184	0/1:15,0:16:0.58:1,0,162	1/1:3,0:22:23.24:189,23,0	1/1:1,8:10:22.17:301,22,0	0/0:23,0:24:31.08:0,31,245	1/1:3,7:11:15.49:193,15,0	0/0:18,0:18:51.16:0,51,806	0/0:13,0:13:36.12:0,36,564	0/0:13,0:13:39.13:0,39,619	0/0:19,0:19:57.17:0,57,857	0/0:12,0:12:36.11:0,36,562	0/0:23,0:23:18.85:0,19,167	0/0:15,0:15:38.64:0,39,277	0/0:27,0:27:81.28:0,81,1316	0/0:21,0:21:63.20:0,63,991	0/0:32,0:32:44.76:0,45,316	0/0:11,0:11:23.37:0,23,143	0/0:13,0:13:12.40:0,12,151	0/0:13,0:13:33.10:0,33,511	0/0:23,0:23:69.14:0,69,1031	0/0:20,0:20:60.20:0,60,959	0/0:12,0:12:33.09:0,33,491	0/0:22,0:22:66.22:0,66,1062	0/0:25,0:25:66.34:0,66,438	0/0:16,0:16:39.46:0,39,284
chr10	43479388	.	T	TAA	2683.14	PASS	AB=0.946;AC=17;AF=0.304;AN=56;BaseQRankSum=-0.745;DP=497;FS=29.792;HRun=11;HaplotypeScore=82.9541;InbreedingCoeff=0.7688;MQ=70.36;MQ0=0;MQRankSum=1.626;QD=15.51;ReadPosRankSum=-0.985;VQSLOD=0.0260;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,18:25:35.61:486,36,0	1/1:12,0:12:27.07:368,27,0	0/0:10,0:11:7.57:0,8,107	0/1:12,0:14:2.48:2,0,44	0/1:15,0:15:9.17:9,0,170	1/1:22,0:22:23.61:252,24,0	1/1:10,0:10:24.03:323,24,0	0/1:25,1:26:14.31:14,0,232	1/1:11,0:11:18.04:229,18,0	0/0:18,0:18:51.07:0,51,491	0/0:14,0:14:35.96:0,36,338	0/0:12,0:13:29.97:0,30,341	0/0:19,0:19:41.96:0,42,398	0/0:12,0:12:33.04:0,33,319	1/1:0,22:24:56.60:789,57,0	1/1:2,10:14:32.08:408,32,0	0/0:28,0:28:75.09:0,75,727	0/0:21,0:21:54.07:0,54,524	0/0:32,0:32:37.48:0,37,377	0/0:12,0:12:17.52:0,18,138	0/0:13,0:13:19.10:0,19,147	0/0:12,0:12:27.03:0,27,262	0/0:23,0:23:54.02:0,54,572	0/0:21,0:21:48.02:0,48,465	0/0:12,0:12:30.01:0,30,282	0/0:21,0:22:51:0,51,544	0/0:25,0:25:55.51:0,56,418	0/0:16,0:16:38.77:0,39,300
chr10	43480302	.	C	CA	2562.02	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.066;DP=599;FS=0.508;HRun=0;HaplotypeScore=88.9410;InbreedingCoeff=0.9983;MQ=77.40;MQ0=0;MQRankSum=-3.793;QD=35.58;ReadPosRankSum=2.904;VQSLOD=3.4178;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,30:31:78.27:1238,78,0	0/0:13,0:13:35.84:0,36,503	0/0:22,0:22:66.19:0,66,876	0/0:20,0:20:57.10:0,57,750	0/0:27,0:27:78.22:0,78,1036	0/0:31,0:31:93.31:0,93,1299	0/0:17,0:17:51.17:0,51,712	0/0:37,0:37:99:0,105,1416	0/0:25,0:25:60.19:0,60,824	0/0:16,0:16:48.14:0,48,653	0/0:21,0:21:63.21:0,63,879	0/0:22,0:22:66.21:0,66,907	0/0:16,0:16:48.15:0,48,654	0/0:14,0:14:39.12:0,39,528	1/1:3,19:22:48.16:748,48,0	1/1:6,13:19:48.13:719,48,0	0/0:26,0:26:75.21:0,75,1026	0/0:12,0:12:36.12:0,36,503	0/0:21,0:21:63.18:0,63,856	0/0:34,0:34:96.24:0,96,1263	0/0:31,0:31:87.26:0,87,1181	0/0:13,0:13:39.13:0,39,538	0/0:13,0:13:39.10:0,39,497	0/0:21,0:21:60.20:0,60,839	0/0:12,0:12:33.11:0,33,461	0/0:27,0:27:81.27:0,81,1132	0/0:29,0:29:84.25:0,84,1130	0/0:7,0:7:21.04:0,21,274
chr10	43480379	.	A	AT	5585.24	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=17.483;DP=588;FS=3.283;HRun=9;HaplotypeScore=117.4428;InbreedingCoeff=0.9412;MQ=76.77;MQ0=0;MQRankSum=-1.926;QD=17.84;ReadPosRankSum=0.427;VQSLOD=4.1033;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,18:21:54.15:597,54,0	1/1:3,9:12:24.06:266,24,0	0/0:26,0:21:31.85:0,32,250	0/0:21,0:18:2.62:0,3,179	1/1:5,2:22:51.97:316,52,0	1/1:1,23:24:46.14:737,46,0	1/1:2,9:11:1.02:239,1,0	1/1:23,0:23:48.68:199,49,0	1/1:1,24:25:63.17:694,63,0	0/0:26,0:26:62.98:0,63,547	0/0:31,0:31:80.96:0,81,700	0/0:14,0:14:41.99:0,42,364	0/0:11,0:11:26.97:0,27,230	0/0:12,0:12:23.98:0,24,208	1/1:3,16:19:54.10:577,54,0	1/1:5,21:26:63.17:694,63,0	0/0:20,0:20:45.55:0,46,435	0/0:14,0:14:38.99:0,39,338	1/1:20,0:19:53.57:220,54,0	1/1:36,0:36:88.67:363,89,0	1/1:18,0:18:32.14:132,32,0	0/0:21,0:21:56.98:0,57,495	0/0:22,0:22:65.99:0,66,573	0/0:14,0:14:38.99:0,39,338	0/0:17,1:18:17.81:0,18,384	0/0:25,0:25:62.96:0,63,544	1/1:33,0:33:77.74:320,78,0	1/1:22,0:23:56.25:232,56,0
chr10	43480386	.	T	TTA	7399.41	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=3.285;DP=576;FS=6.635;HRun=0;HaplotypeScore=119.5180;InbreedingCoeff=0.8983;MQ=71.77;MQ0=0;MQRankSum=-3.951;QD=42.53;ReadPosRankSum=-0.014;VQSLOD=5.5393;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:47.17:0,47,177	0/0:10,0:10:19.96:0,20,69	0/0:23,0:18:37.19:0,37,513	0/0:18,0:14:32.55:0,33,406	0/1:22,0:22:38.65:205,0,39	0/0:25,0:25:63.40:0,63,268	0/0:11,0:11:25.85:0,26,138	1/1:0,22:23:69.14:1070,69,0	0/0:26,0:26:49.97:0,50,174	0/0:28,0:28:72.22:0,72,987	0/0:31,0:31:87.24:0,87,1219	0/0:16,0:16:45.14:0,45,626	0/0:9,0:9:27.09:0,27,390	0/0:11,0:11:33.08:0,33,427	0/0:19,0:19:45.74:0,46,182	0/0:25,0:25:58.09:0,58,237	0/0:19,0:19:54.15:0,54,758	0/0:13,0:13:39.13:0,39,564	1/1:0,21:20:63.21:1082,63,0	1/1:0,37:38:99:1752,111,0	1/1:2,14:16:39.04:651,39,0	0/0:21,0:21:60.19:0,60,853	0/0:23,0:23:69.22:0,69,981	0/0:13,0:13:39.13:0,39,555	0/0:17,0:17:50.66:0,51,704	0/0:25,0:25:72.18:0,72,983	1/1:0,32:33:87.30:1532,87,0	1/1:0,20:21:63.22:1108,63,0
chr10	43480636	.	CT	C	1444.19	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.051;DP=565;FS=7.945;HRun=3;HaplotypeScore=57.2474;InbreedingCoeff=0.9991;MQ=88.69;MQ0=0;MQRankSum=-4.530;QD=28.88;ReadPosRankSum=0.126;VQSLOD=2.3936;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,20:21:42.76:620,43,0	0/0:12,0:12:36.12:0,36,518	0/0:31,0:31:81.20:0,81,1072	0/0:24,0:24:56.75:0,57,863	0/0:23,0:23:69.22:0,69,974	0/0:23,0:23:69.21:0,69,959	0/0:22,0:22:63.20:0,63,891	0/0:28,0:28:81.25:0,81,1118	0/0:25,0:25:75.24:0,75,1061	0/0:18,0:18:51.17:0,51,734	0/0:22,0:22:66.22:0,66,950	0/0:16,0:16:48.15:0,48,675	0/0:11,0:11:33.10:0,33,457	0/0:16,0:16:48.15:0,48,675	1/1:1,11:12:33.10:409,33,0	1/1:0,17:17:45.14:558,45,0	0/0:20,0:20:57.19:0,57,820	0/0:32,0:32:81.28:0,81,1304	0/0:21,0:21:63.19:0,63,887	0/0:17,0:17:48.16:0,48,691	0/0:35,0:35:99:0,99,1385	0/0:13,0:13:39.13:0,39,561	0/0:10,0:10:30.08:0,30,396	0/0:16,0:16:47.75:0,48,657	0/0:9,0:9:27.09:0,27,389	0/0:28,0:28:78.26:0,78,1109	0/0:28,0:28:81.26:0,81,1148	0/0:15,0:15:36.12:0,36,515
chr10	43481519	.	ATT	A	5742.70	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=13.418;DP=509;FS=10.855;HRun=4;HaplotypeScore=61.2074;InbreedingCoeff=0.9992;MQ=74.17;MQ0=0;MQRankSum=-1.272;QD=39.07;ReadPosRankSum=0.854;VQSLOD=3.3623;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:96.33:0,96,1785	0/0:9,0:9:27.09:0,27,505	0/0:21,0:20:60.17:0,60,975	0/0:12,0:12:32.70:0,33,534	1/1:0,27:27:81.27:1186,81,0	0/0:16,0:16:48.16:0,48,836	0/0:15,0:15:45.15:0,45,843	1/1:4,20:24:60.19:858,60,0	0/0:13,0:13:36.12:0,36,635	0/0:29,0:29:81.28:0,81,1510	0/0:27,0:27:78.26:0,78,1404	0/0:12,0:12:36.09:0,36,585	0/0:16,0:16:48.16:0,48,899	0/0:12,0:12:33.10:0,33,585	0/0:13,0:13:39.13:0,39,707	0/0:18,0:18:45.15:0,45,843	0/0:23,0:23:66.23:0,66,1209	0/0:25,0:25:75.26:0,75,1404	1/1:2,11:13:33.10:464,33,0	1/1:1,18:19:54.18:789,54,0	1/1:0,11:11:33.03:459,33,0	0/0:9,0:9:27.08:0,27,470	0/0:13,0:13:39.13:0,39,730	0/0:9,0:9:27.09:0,27,506	0/0:20,0:20:60.20:0,60,1080	0/0:17,0:17:45.15:0,45,814	1/1:3,23:25:66.22:972,66,0	1/1:0,27:27:69.23:1016,69,0
chr10	43482403	.	TTCCCTGTCATATACAGAGGACACAA	T	2058.55	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.618;DP=747;FS=7.224;HRun=0;HaplotypeScore=464.8883;InbreedingCoeff=0.9994;MQ=90.71;MQ0=0;MQRankSum=-2.520;QD=108.34;ReadPosRankSum=-0.859;VQSLOD=2.7234;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,120,12056	0/0:11,0:11:30.10:0,30,3312	0/0:34,0:34:90.31:0,90,6117	0/0:27,0:27:81.28:0,81,5675	1/1:3,16:19:45.05:2153,45,0	0/0:27,0:27:81.28:0,81,8291	0/0:26,0:26:75.26:0,75,6586	0/0:28,0:28:81.27:0,81,6120	0/0:31,0:31:93.32:0,93,9832	0/0:39,0:39:99:0,117,11421	0/0:16,0:16:48.16:0,48,4985	0/0:34,0:34:99:0,99,9510	0/0:33,0:33:99:0,99,10562	0/0:24,0:24:72.25:0,72,8113	0/0:23,0:23:69.23:0,69,7140	0/0:21,0:21:60.21:0,60,5771	0/0:30,0:30:87.30:0,87,8747	0/0:19,0:19:54.19:0,54,5646	0/0:20,0:20:54.19:0,54,4780	0/0:28,0:28:84.27:0,84,8260	0/0:52,0:52:99:0,151,14461	0/0:27,0:27:78.27:0,78,8266	0/0:14,0:14:42.14:0,42,3645	0/0:29,0:29:84.25:0,84,8468	0/0:18,0:18:51.18:0,51,5315	0/0:27,0:27:78.26:0,78,8040	0/0:29,0:29:87.26:0,87,9080	0/0:18,0:18:54.19:0,54,5355
chr10	43482493	.	C	CT	4593.41	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-12.905;DP=751;FS=12.127;HRun=3;HaplotypeScore=84.3669;InbreedingCoeff=0.9999;MQ=78.21;MQ0=0;MQRankSum=-0.701;QD=37.34;ReadPosRankSum=0.616;VQSLOD=4.1671;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,159,1896	0/0:12,0:12:33.10:0,33,396	0/0:25,0:25:32.76:0,33,537	0/0:19,0:19:48.13:0,48,553	0/0:33,0:33:81.25:0,81,971	0/0:23,0:23:66.19:0,66,780	0/0:31,0:31:84.24:0,84,996	0/0:22,0:22:60.17:0,60,703	0/0:33,0:33:90.26:0,90,1068	1/1:3,32:35:96.30:1325,96,0	1/1:4,15:18:45.15:621,45,0	0/0:32,0:32:93.29:0,93,1116	0/0:32,0:32:90.25:0,90,1056	0/0:21,0:21:60.18:0,60,719	0/0:28,0:28:81.25:0,81,972	0/0:22,0:22:57.17:0,57,684	0/0:31,0:31:90.28:0,90,1080	1/1:1,23:24:66.22:924,66,0	0/0:28,0:28:78.24:0,78,935	0/0:21,0:21:60.18:0,60,720	0/0:39,0:39:99:0,111,1332	0/0:31,0:31:84.26:0,84,1007	0/0:25,0:25:66.19:0,66,780	0/0:29,0:29:81.25:0,81,972	1/1:1,18:19:48.16:672,48,0	1/1:1,25:26:75.25:1050,75,0	0/0:21,0:21:54.14:0,54,624	0/0:15,0:15:45.14:0,45,540
chr10	43482961	.	C	CTCAGGTATCCAGGCCT	11901.53	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-0.727;DP=641;FS=1.891;HRun=0;HaplotypeScore=251.0402;InbreedingCoeff=0.9607;MQ=83.34;MQ0=0;MQRankSum=-5.929;QD=40.34;ReadPosRankSum=-8.096;VQSLOD=1.2855;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:78.21:0,78,2846	0/0:17,0:17:33.08:0,33,1065	0/0:23,0:23:8.93:0,9,130	0/0:23,0:23:23.85:0,24,334	1/1:28,2:30:29.50:1002,30,0	0/0:23,0:23:48.11:0,48,1564	0/0:14,0:14:21.05:0,21,650	1/1:33,0:33:51.15:1232,51,0	0/0:20,0:20:42.14:0,42,1819	1/1:8,7:26:51.06:1408,51,0	1/1:6,4:24:24.34:782,24,0	0/0:21,0:21:48.14:0,48,1669	0/0:16,0:16:30.09:0,30,1136	0/0:20,0:20:33.07:0,33,975	0/0:22,0:22:39.12:0,39,1409	0/0:15,0:15:33.09:0,33,1041	0/0:28,0:28:51.17:0,51,2021	1/1:16,0:16:26.92:732,27,0	1/1:24,1:25:45.83:1462,46,0	1/1:7,11:28:35.95:1562,36,0	1/1:32,0:32:28.23:538,28,0	0/0:26,0:26:57.19:0,57,2140	0/0:15,0:15:32.85:0,33,1174	0/0:27,0:27:45.11:0,45,1418	1/1:5,5:19:3.01:227,3,0	1/1:8,9:27:47.22:1713,47,0	1/1:7,15:27:12.04:910,12,0	1/1:8,0:8:20.96:333,21,0
chr10	43483054	.	AG	A	2489.37	PASS	AB=0.986;AC=23;AF=0.411;AN=56;BaseQRankSum=3.370;DP=563;FS=1.523;HRun=3;HaplotypeScore=92.7307;InbreedingCoeff=0.3343;MQ=79.58;MQ0=0;MQRankSum=-0.058;QD=7.88;ReadPosRankSum=-2.788;VQSLOD=-0.0605;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:30:38.60:328,39,0	1/1:11,0:11:26.24:131,26,0	0/0:20,0:20:24.84:0,25,309	0/0:21,0:19:21.66:0,22,265	1/1:1,29:30:76.20:938,76,0	1/1:18,0:18:41.52:187,42,0	1/1:14,0:14:17.96:113,18,0	0/1:27,1:28:48.69:122,0,49	1/1:17,0:17:41.13:180,41,0	0/1:29,0:29:51.64:62,0,52	0/1:22,0:22:8.53:9,0,79	0/0:14,0:14:42.14:0,42,622	0/0:11,0:11:33.11:0,33,491	0/0:14,0:14:42.09:0,42,577	0/1:10,0:10:25.24:30,0,25	1/1:12,1:13:20.14:154,20,0	0/0:23,0:23:69.23:0,69,1018	0/1:17,0:17:41.82:69,0,42	0/1:20,1:21:49.64:160,0,50	0/0:33,0:33:28.78:0,29,151	0/1:21,1:22:53.54:54,0,108	0/0:22,0:22:58.45:0,58,824	0/0:17,0:17:51.12:0,51,697	0/0:24,0:24:69.20:0,69,970	0/0:22,0:22:10.28:0,10,88	0/1:15,0:15:26.37:73,0,26	0/0:24,1:25:16.13:0,16,163	0/1:19,0:19:48.93:80,0,49
chr10	43483055	.	G	GT	1977.28	PASS	AB=0.725;AC=12;AF=0.214;AN=56;BaseQRankSum=-1.121;DP=568;FS=0.422;HRun=0;HaplotypeScore=97.3531;InbreedingCoeff=0.4628;MQ=79.46;MQ0=0;MQRankSum=0.078;QD=12.92;ReadPosRankSum=0.795;VQSLOD=4.6507;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:16,16:32:10.01:463,0,10	1/1:2,9:11:25.88:265,26,0	0/0:21,0:20:29.18:0,29,447	0/0:21,0:19:13.90:0,14,348	0/0:31,0:31:28.05:0,28,120	1/1:0,17:18:44.89:442,45,0	0/1:3,10:13:0.67:212,0,1	0/0:29,0:29:38.55:0,39,285	1/1:0,17:17:47.08:473,47,0	0/0:29,0:29:41.83:0,42,296	0/0:22,0:22:55.61:0,56,308	0/0:14,0:14:42.14:0,42,586	0/0:11,0:11:33.11:0,33,461	0/0:14,0:14:42.14:0,42,584	0/1:6,6:12:43.36:63,0,43	0/1:4,7:12:4.96:188,0,5	0/0:23,0:23:69.23:0,69,963	0/1:15,2:17:22.27:22,0,143	0/0:20,1:21:11:0,11,195	0/0:33,0:33:55.59:0,56,438	0/1:20,1:21:17.43:17,0,246	0/0:22,0:22:54.50:0,55,802	0/0:18,0:18:51.17:0,51,711	0/0:23,0:23:69.23:0,69,963	0/0:23,0:23:49.40:0,49,270	0/0:15,0:15:30.10:0,30,158	0/0:26,0:26:69.04:0,69,414	0/0:18,1:19:14.07:0,14,200
chr10	43485527	.	G	GA	4787.39	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-13.726;DP=602;FS=1.225;HRun=4;HaplotypeScore=62.7234;InbreedingCoeff=0.9999;MQ=78.07;MQ0=0;MQRankSum=-3.696;QD=36.83;ReadPosRankSum=-1.159;VQSLOD=4.6563;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:99:0,99,1122	0/0:14,0:14:39.09:0,39,430	0/0:21,0:21:48.03:0,48,524	0/0:20,0:20:39.77:0,40,471	0/0:20,0:20:60.17:0,60,681	0/0:22,0:22:66.19:0,66,748	0/0:26,0:26:72.20:0,72,816	1/1:1,24:25:72.21:951,72,0	0/0:15,0:15:45.11:0,45,499	0/0:21,0:21:57.16:0,57,646	0/0:21,0:21:54.15:0,54,609	0/0:22,0:22:66.19:0,66,748	0/0:15,0:15:45.13:0,45,507	0/0:18,0:18:54.15:0,54,613	0/0:16,0:16:39.09:0,39,432	0/0:13,0:13:39.11:0,39,442	0/0:21,0:21:60.16:0,60,672	0/0:29,0:29:75.21:0,75,849	1/1:1,12:13:39.10:513,39,0	1/1:2,28:30:84.19:1107,84,0	1/1:2,17:19:42.14:575,42,0	0/0:24,0:24:66.19:0,66,749	0/0:16,0:16:45.13:0,45,510	0/0:21,0:21:54.15:0,54,613	0/0:32,0:32:84.24:0,84,951	0/0:32,0:32:90.25:0,90,1020	1/1:1,21:22:60.20:821,60,0	1/1:1,20:21:60.20:821,60,0
chr10	43485990	.	CGAGA	C	576.45	PASS	AB=0.883;AC=12;AF=0.231;AN=52;BaseQRankSum=0.185;DP=479;FS=9.181;HRun=0;HaplotypeScore=84.8147;InbreedingCoeff=0.2392;MQ=77.46;MQ0=7;MQRankSum=-1.049;QD=4.18;ReadPosRankSum=-0.575;VQSLOD=0.9782;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:24.03:0,24,345	0/0:11,0:11:5.79:0,6,72	0/0:49,0:29:0:0,0,0	0/0:49,0:23:0:0,0,0	0/0:10,0:10:2.50:0,2,23	0/0:10,0:17:9.31:0,9,105	0/0:16,0:27:18.05:0,18,303	0/0:18,0:18:5.93:0,6,40	0/0:10,0:12:10.26:0,10,187	0/0:13,0:13:6.02:0,6,121	./.	0/1:11,2:15:6.63:137,0,7	1/1:11,0:11:11.14:103,11,0	1/1:11,0:10:5.99:154,6,0	0/1:15,0:15:16.02:45,0,16	./.	0/1:21,6:27:54.52:55,0,513	0/0:13,0:13:12.94:0,13,169	0/0:14,0:13:6:0,6,53	0/0:13,0:13:0.47:0,0,1	0/0:35,0:35:3.86:0,4,27	0/1:9,0:9:0:0,0,0	1/1:5,0:5:3:25,3,0	0/1:19,12:32:0.99:179,0,1	0/0:14,0:14:2.97:0,3,20	0/0:9,0:9:6:0,6,80	0/1:12,0:12:10.93:11,0,38	0/0:4,0:4:2.99:0,3,24
chr10	43486033	.	GAGAA	G	3796.29	PASS	AB=1.000;AC=30;AF=0.536;AN=56;BaseQRankSum=-2.497;DP=526;FS=0.000;HRun=0;HaplotypeScore=89.1221;InbreedingCoeff=0.3571;MQ=71.64;MQ0=12;MQRankSum=-0.614;QD=11.26;ReadPosRankSum=-2.239;VQSLOD=2.3103;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:33:99:306,0,100	0/0:10,0:10:22.70:0,23,229	0/0:23,0:14:27.95:0,28,270	0/0:45,0:26:47.66:0,48,508	1/1:15,0:15:32.91:262,33,0	0/0:23,0:22:38:0,38,373	0/0:25,0:25:51.03:0,51,702	1/1:15,0:13:29.44:240,29,0	0/0:11,0:11:4.09:0,4,248	0/1:20,0:20:31.69:374,0,32	1/1:4,0:4:11.95:92,12,0	0/1:18,0:17:25.64:26,0,160	0/1:16,0:16:60.97:61,0,198	0/1:17,0:17:33.13:33,0,234	1/1:17,0:17:6.02:71,6,0	1/1:12,0:12:29.75:222,30,0	0/0:32,0:31:28.03:0,28,823	0/1:18,0:18:33.44:229,0,33	1/1:11,0:10:23.97:207,24,0	1/1:12,0:12:23.93:196,24,0	1/1:45,0:45:99:838,103,0	0/0:8,0:6:14.97:0,15,128	0/0:12,0:11:20.96:0,21,175	0/1:41,0:41:58.15:58,0,453	1/1:7,0:7:13.80:105,14,0	0/1:15,0:15:31.65:231,0,32	1/1:2,8:10:3.01:38,3,0	1/1:11,0:11:28.66:208,29,0
chr10	43486205	.	A	ACACG	1468.06	PASS	AB=1.000;AC=18;AF=0.346;AN=52;BaseQRankSum=-1.870;DP=607;FS=5.488;HRun=0;HaplotypeScore=146.7234;InbreedingCoeff=0.6160;MQ=54.37;MQ0=13;MQRankSum=1.380;QD=6.22;ReadPosRankSum=-0.049;VQSLOD=1.9169;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:28:0:0,0,0	0/0:6,0:5:5.99:0,6,49	./.	./.	0/0:10,0:8:3.01:0,3,47	0/0:16,0:16:11.65:0,12,101	0/0:39,0:37:30.25:0,30,236	0/1:13,0:13:0:0,0,0	0/0:18,0:18:21.74:0,22,160	1/1:12,5:17:15:290,15,0	1/1:8,0:7:5.97:46,6,0	0/0:22,0:22:26.98:0,27,324	0/0:26,0:26:39:0,39,493	0/0:20,0:19:35.99:0,36,404	0/0:18,0:16:8.38:0,8,83	0/0:20,0:20:11.76:0,12,111	0/0:42,0:43:72.10:0,72,913	1/1:33,3:37:42.87:763,43,0	1/1:13,0:13:4.57:49,5,0	1/1:9,0:9:2.96:55,3,0	0/1:72,0:66:48.02:48,0,323	0/0:16,0:15:12.03:0,12,163	0/0:7,0:7:6.01:0,6,72	0/0:39,0:39:63.13:0,63,837	1/1:17,0:17:20.96:252,21,0	1/1:10,1:10:11.77:126,12,0	0/0:14,0:14:9.88:0,10,67	0/1:7,0:6:6.81:7,0,17
chr10	43486207	.	ACG	A	1467.19	PASS	AB=0.893;AC=15;AF=0.268;AN=56;BaseQRankSum=5.133;DP=600;FS=1.910;HRun=0;HaplotypeScore=121.7544;InbreedingCoeff=-0.0557;MQ=53.22;MQ0=12;MQRankSum=-2.640;QD=5.54;ReadPosRankSum=-3.697;VQSLOD=1.9710;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:26,1:25:0.20:21,0,0	0/1:5,1:5:13.26:56,0,13	0/0:23,0:8:15.01:0,15,154	0/0:32,0:17:13.14:0,13,388	0/1:8,1:7:49.65:50,0,63	0/1:10,5:16:11.37:91,0,11	0/1:31,3:35:96.39:195,0,96	0/1:12,1:13:27.07:102,0,27	0/1:13,3:17:4.61:207,0,5	0/0:16,0:16:45.13:0,45,583	0/0:7,0:6:11.96:0,12,112	0/0:23,0:23:54.59:0,55,823	0/0:26,0:26:59.93:0,60,897	0/0:24,0:23:56.79:0,57,721	0/1:16,0:15:11.82:73,0,12	1/1:19,1:20:3.73:85,4,0	0/0:43,0:43:52.78:0,53,1459	0/0:37,0:35:96.43:0,96,1066	0/0:11,0:11:13.04:0,13,83	0/1:10,0:10:11.62:103,0,12	0/1:67,6:67:99:519,0,152	0/0:17,0:16:30.55:0,31,520	0/0:7,0:7:12:0,12,150	0/0:40,0:40:58.39:0,58,1301	0/0:18,0:18:48.49:0,48,555	0/0:11,0:10:6.70:0,7,297	0/1:11,2:13:43.24:82,0,43	0/1:7,0:6:14.50:38,0,14
chr10	43486211	.	ACG	A	667.91	PASS	AB=0.917;AC=11;AF=0.196;AN=56;BaseQRankSum=8.278;DP=589;FS=0.550;HRun=0;HaplotypeScore=124.0627;InbreedingCoeff=-0.0356;MQ=51.91;MQ0=12;MQRankSum=-5.282;QD=3.11;ReadPosRankSum=-0.781;VQSLOD=2.4233;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:25:1.68:0,2,5	0/1:4,2:5:10.73:50,0,11	0/0:20,0:5:11.97:0,12,99	0/0:30,0:15:26.15:0,26,348	0/0:9,0:7:16.89:0,17,164	0/1:9,3:13:11.29:90,0,11	0/1:35,3:36:99:177,0,103	0/1:12,0:12:73.26:73,0,86	0/1:10,3:13:14.08:142,0,14	0/0:18,0:18:54.14:0,54,783	0/0:7,0:6:14.92:0,15,213	0/0:25,0:25:72.23:0,72,1189	0/0:25,0:25:72.22:0,72,1175	0/0:26,0:25:63.11:0,63,1122	0/1:16,0:14:14.81:52,0,15	1/1:20,0:20:3.72:84,4,0	0/0:42,0:42:99:0,104,1943	0/0:36,0:34:96.23:0,96,1455	0/0:11,0:11:30.65:0,31,255	0/1:10,0:10:62.61:63,0,69	0/1:73,0:68:73.12:73,0,728	0/0:17,0:16:42.06:0,42,647	0/0:6,0:6:9.03:0,9,157	0/0:39,0:39:99:0,111,1829	0/0:18,0:18:45.62:0,46,741	0/0:12,0:11:32.32:0,32,505	0/1:13,0:13:8.33:8,0,235	0/0:6,0:5:8.28:0,8,42
chr10	43486644	.	GCA	G	3576.54	PASS	AB=0.862;AC=38;AF=0.704;AN=54;BaseQRankSum=3.860;DP=705;FS=0.000;HRun=0;HaplotypeScore=134.5784;InbreedingCoeff=0.0750;MQ=55.55;MQ0=11;MQRankSum=-1.329;QD=6.03;ReadPosRankSum=1.986;VQSLOD=3.1880;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:32,1:36:37.06:37,0,38	1/1:2,0:5:2.84:14,3,0	0/0:26,0:16:3.01:0,3,38	./.	1/1:13,0:21:14.81:79,15,0	1/1:6,0:17:19.54:93,20,0	0/1:10,0:23:7.46:7,0,28	0/1:28,1:25:29.73:47,0,30	1/1:9,0:30:18.03:87,18,0	1/1:33,9:43:30.77:502,31,0	1/1:15,3:18:26.55:210,27,0	0/0:32,0:30:43.30:0,43,705	0/1:25,5:29:99:165,0,333	0/1:24,1:25:26.01:26,0,417	0/1:15,0:23:10.45:56,0,10	0/1:14,0:21:3.09:61,0,3	1/1:18,12:30:26.82:266,27,0	1/1:11,5:19:34.91:327,35,0	0/1:15,2:16:25.38:88,0,25	1/1:11,6:17:24.08:200,24,0	1/1:36,8:43:44.36:403,44,0	0/0:26,1:27:45.05:0,45,563	0/1:24,1:24:26.94:27,0,379	0/1:36,2:38:74.22:74,0,581	1/1:12,0:12:5.85:47,6,0	1/1:26,4:29:30.61:389,31,0	1/1:17,2:21:28.45:271,28,0	1/1:7,4:9:8.99:99,9,0
chr10	43486721	.	C	CA	1532.96	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=12.850;DP=1083;FS=12.040;HRun=1;HaplotypeScore=205.0871;InbreedingCoeff=0.9971;MQ=58.74;MQ0=22;MQRankSum=-2.643;QD=13.10;ReadPosRankSum=-2.622;VQSLOD=0.7862;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:18,37:55:77.84:779,78,0	0/0:9,0:9:21.06:0,21,258	0/0:100,0:31:59.60:0,60,754	0/0:104,0:35:29.09:0,29,717	0/0:18,0:18:42.05:0,42,522	0/0:13,0:13:33.06:0,33,409	0/0:40,0:40:99:0,114,1479	0/0:39,0:38:99:0,102,1267	0/0:42,0:42:99:0,102,1298	0/0:48,0:46:99:0,121,1487	0/0:21,0:21:47.67:0,48,618	0/0:33,0:33:87.27:0,87,1112	0/0:28,0:27:69.16:0,69,848	0/0:19,0:19:54.18:0,54,700	1/1:8,27:35:57.37:494,57,0	1/1:10,17:27:39.86:403,40,0	0/0:49,0:49:99:0,141,1784	0/0:30,0:30:79.45:0,79,982	0/0:40,0:38:92.49:0,92,1135	0/0:30,0:28:52.39:0,52,648	0/0:110,0:99:99:0,234,2994	0/0:34,0:34:90.29:0,90,1166	0/0:20,0:20:57.19:0,57,738	0/0:52,0:51:99:0,124,1531	0/0:22,0:20:26.83:0,27,325	0/0:33,0:32:93.28:0,93,1181	0/0:22,0:22:47.95:0,48,582	0/0:8,0:8:24.08:0,24,311
chr10	43486722	.	AC	A	937.51	PASS	AB=0.921;AC=4;AF=0.071;AN=56;BaseQRankSum=12.065;DP=1084;FS=0.925;HRun=2;HaplotypeScore=204.6119;InbreedingCoeff=0.5673;MQ=58.90;MQ0=22;MQRankSum=-1.743;QD=8.08;ReadPosRankSum=-1.754;VQSLOD=0.3886;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:47,8:55:34.42:440,34,0	0/0:8,0:8:21.07:0,21,305	0/0:100,0:31:60.68:0,61,832	0/0:103,0:35:33.93:0,34,789	0/0:18,0:18:45.11:0,45,643	0/0:13,0:13:30.10:0,30,449	0/0:38,2:40:99:0,114,1694	0/0:39,0:38:99:0,102,1472	0/0:40,1:41:99:0,105,1523	0/0:48,0:46:94.09:0,94,1651	0/0:21,0:21:47.84:0,48,712	0/0:33,0:33:90.30:0,90,1327	0/0:27,1:27:66.22:0,66,956	0/0:20,0:20:57.18:0,57,827	0/1:33,2:35:3.83:435,0,4	0/1:23,3:26:28.34:178,0,28	0/0:50,0:50:99:0,141,2061	0/0:30,0:30:79.45:0,79,1112	0/0:40,0:38:62.46:0,62,1299	0/0:31,0:28:53.35:0,53,768	0/0:106,3:99:99:0,236,3460	0/0:33,0:33:90.30:0,90,1343	0/0:21,0:21:60.20:0,60,871	0/0:50,2:51:99:0,127,1788	0/0:23,0:21:27.04:0,27,378	0/0:35,0:34:93.30:0,93,1356	0/0:22,0:22:40.28:0,40,675	0/0:8,0:8:24.08:0,24,359
chr10	43486723	.	C	CA	2257.79	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=12.448;DP=1084;FS=6.185;HRun=1;HaplotypeScore=204.2055;InbreedingCoeff=0.9960;MQ=59.08;MQ0=21;MQRankSum=-3.775;QD=18.81;ReadPosRankSum=-1.792;VQSLOD=2.7956;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:20,37:57:99:1079,106,0	0/0:8,0:8:21.07:0,21,290	0/0:95,0:28:63.39:0,63,804	0/0:104,0:35:22.27:0,22,710	0/0:17,0:17:45.02:0,45,603	0/0:13,0:13:30.10:0,30,419	0/0:40,0:40:99:0,114,1583	0/0:37,0:37:99:0,102,1381	0/0:41,0:41:98.45:0,98,1415	0/0:46,1:47:96.64:0,97,1525	0/0:21,0:21:47.83:0,48,661	0/0:33,0:33:90.30:0,90,1247	0/0:29,0:28:66.22:0,66,905	0/0:19,0:19:57.18:0,57,777	1/1:8,27:35:67.05:812,67,0	1/1:11,17:28:44.46:510,44,0	0/0:50,0:50:99:0,141,1931	0/0:29,0:30:78.67:0,79,1024	0/0:41,0:39:68.53:0,69,1232	0/0:31,0:28:53.70:0,54,725	0/0:109,1:101:99:0,240,3238	0/0:34,0:34:90.30:0,90,1253	0/0:21,0:21:60.20:0,60,824	0/0:53,0:52:99:0,127,1680	0/0:22,0:20:26.96:0,27,354	0/0:35,0:34:93.29:0,93,1266	0/0:21,0:22:30.79:0,31,620	0/0:8,0:8:24.08:0,24,333
chr10	43486780	.	TAC	T	6440.37	PASS	AB=0.662;AC=11;AF=0.196;AN=56;BaseQRankSum=4.150;DP=1107;FS=13.331;HRun=0;HaplotypeScore=197.8623;InbreedingCoeff=0.8732;MQ=54.67;MQ0=33;MQRankSum=1.488;QD=24.30;ReadPosRankSum=-0.095;VQSLOD=4.5424;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:67,1:69:99:0,126,2289	0/0:8,0:8:11.99:0,12,192	0/0:91,0:16:26.89:0,27,342	0/0:85,0:23:40.54:0,41,483	0/0:22,0:22:57.08:0,57,831	0/0:18,0:18:45.15:0,45,750	0/0:50,0:50:99:0,110,1845	0/1:24,25:40:99:670,0,123	0/0:37,0:36:87.30:0,87,1439	0/0:44,0:43:99:0,117,1967	0/0:21,0:21:51.17:0,51,772	0/0:29,0:29:69.22:0,69,1145	0/0:23,0:22:60.15:0,60,937	0/0:29,0:29:78.21:0,78,1257	0/0:33,0:33:84.28:0,84,1367	0/0:26,0:26:63.09:0,63,1001	0/0:45,0:42:99:0,102,1728	0/0:24,0:23:51.91:0,52,991	1/1:13,16:25:34.92:661,35,0	1/1:9,17:23:50.98:572,51,0	1/1:45,86:121:99:3878,275,0	0/0:34,0:34:84.27:0,84,1364	0/0:26,0:26:66.16:0,66,1075	0/0:62,0:61:99:0,144,2393	0/0:24,0:23:50.15:0,50,812	0/0:40,0:39:99:0,99,1613	1/1:5,19:24:38.77:506,39,0	1/1:3,3:6:12.04:153,12,0
chr10	43486795	.	CCA	C	2664.34	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=6.039;DP=1088;FS=16.763;HRun=0;HaplotypeScore=207.1115;InbreedingCoeff=0.9083;MQ=55.00;MQ0=31;MQRankSum=3.576;QD=22.02;ReadPosRankSum=2.220;VQSLOD=2.9845;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,48:58:99:1312,102,0	0/0:8,0:8:18.05:0,18,276	0/0:85,0:15:1.74:0,2,201	0/0:86,0:22:35.56:0,36,497	0/0:29,0:29:66.22:0,66,1100	0/0:18,0:18:48.16:0,48,776	0/0:46,0:46:99:0,104,1723	0/0:32,0:26:60.11:0,60,928	0/0:35,0:34:93.15:0,93,1464	0/0:45,0:44:99:0,122,1875	0/0:22,0:22:33.11:0,33,552	0/0:28,0:28:66.19:0,66,1067	0/0:22,0:23:57.18:0,57,910	0/0:29,0:29:78.26:0,78,1279	1/1:9,26:35:69.22:878,69,0	1/1:5,23:28:48.15:617,48,0	0/0:41,0:38:96.27:0,96,1493	0/0:23,0:22:43.72:0,44,697	0/0:28,0:27:75.13:0,75,1081	0/0:23,0:20:39.12:0,39,596	0/0:139,1:133:99:0,319,5354	0/0:30,0:30:78.16:0,78,1240	0/0:30,0:30:54.18:0,54,903	0/0:65,0:65:99:0,150,2431	0/0:28,0:28:49.78:0,50,812	0/0:40,0:39:99:0,102,1639	0/0:20,0:20:45.15:0,45,703	0/0:4,0:4:9.03:0,9,137
chr10	43486986	.	AAC	A	4846.52	PASS	AB=0.673;AC=15;AF=0.268;AN=56;BaseQRankSum=5.874;DP=1043;FS=1.481;HRun=0;HaplotypeScore=184.1720;InbreedingCoeff=0.8809;MQ=47.80;MQ0=49;MQRankSum=-1.888;QD=20.89;ReadPosRankSum=0.210;VQSLOD=5.1487;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:43:96.29:0,96,1398	0/0:5,0:5:12.04:0,12,191	0/0:66,0:8:20.80:0,21,212	0/0:62,0:7:5.98:0,6,55	1/1:3,21:21:35.87:377,36,0	0/0:20,0:20:31.29:0,31,718	0/0:45,0:45:88.19:0,88,1592	0/0:40,0:34:67.72:0,68,1020	0/0:32,1:32:36.32:0,36,1030	1/1:26,18:38:73.90:853,74,0	1/1:3,23:24:40:486,40,0	0/0:41,0:41:89.38:0,89,1327	0/0:21,0:21:51.09:0,51,727	0/0:41,0:40:97.28:0,97,1474	1/1:9,11:18:46.30:524,46,0	1/1:4,15:19:42.09:503,42,0	0/0:47,1:48:35.91:0,36,1368	0/1:19,18:36:38.76:723,0,39	0/0:33,0:18:35.68:0,36,655	0/0:26,0:25:54.59:0,55,879	0/0:131,1:125:99:0,142,3510	0/0:37,0:36:74.64:0,75,1181	0/0:29,2:31:12.30:0,12,731	0/0:45,1:46:93.27:0,93,1435	1/1:16,10:24:53.49:575,53,0	1/1:19,16:31:69.03:805,69,0	0/0:20,0:20:57.04:0,57,832	0/0:19,0:18:51.17:0,51,812
chr10	43487046	.	C	CA	646.62	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=7.169;DP=914;FS=17.886;HRun=1;HaplotypeScore=240.1202;InbreedingCoeff=0.6368;MQ=51.86;MQ0=28;MQRankSum=-4.841;QD=10.96;ReadPosRankSum=-2.408;VQSLOD=-0.4657;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,17:19:44.30:685,44,0	0/0:5,0:5:15.05:0,15,208	0/0:65,0:12:28.33:0,28,311	0/0:70,0:17:39.36:0,39,351	0/0:16,0:16:38.29:0,38,519	0/0:26,0:26:62.88:0,63,828	0/0:37,0:37:86.97:0,87,1122	0/0:47,0:47:99:0,129,1698	0/0:35,0:34:88.55:0,89,1179	0/1:39,0:39:67.42:67,0,1124	0/0:21,0:22:34.47:0,34,538	0/0:33,0:33:81.20:0,81,1066	0/0:22,0:22:60.20:0,60,826	0/0:30,0:30:71.43:0,71,979	0/0:20,0:19:44.93:0,45,585	0/0:18,0:18:39.13:0,39,543	0/0:39,0:39:60.76:0,61,1304	0/0:26,0:26:18.85:0,19,749	0/0:30,0:24:56.46:0,56,803	0/0:26,0:25:56.43:0,56,708	0/0:104,0:100:99:0,179,2484	0/0:36,0:35:70.36:0,70,1088	0/0:24,0:24:55.42:0,55,757	0/0:41,0:40:67.12:0,67,939	0/0:27,0:27:39.63:0,40,627	0/0:25,0:23:36.91:0,37,683	0/0:16,0:16:38.98:0,39,540	0/0:14,0:14:42.14:0,42,585
chr10	43487090	.	T	TACACC	5053.14	PASS	AB=0.959;AC=34;AF=0.607;AN=56;BaseQRankSum=-1.785;DP=603;FS=1.234;HRun=0;HaplotypeScore=307.2918;InbreedingCoeff=0.1114;MQ=52.07;MQ0=7;MQRankSum=-4.462;QD=10.51;ReadPosRankSum=-5.197;VQSLOD=2.7291;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,7:16:16.08:516,16,0	0/1:4,0:4:1.98:2,0,35	0/1:20,0:11:10.38:10,0,59	0/0:27,0:12:8.59:0,9,58	1/1:16,1:17:9.67:147,10,0	0/1:21,0:21:22.96:23,0,405	0/0:23,0:23:40.53:0,41,571	1/1:15,11:23:32.17:458,32,0	0/1:28,0:28:66.85:67,0,503	0/1:42,8:48:99:1036,0,308	1/1:18,2:21:5.98:33,6,0	0/1:32,0:32:84.18:84,0,678	0/0:18,0:18:44.87:0,45,584	0/1:24,0:24:14.96:15,0,410	1/1:6,5:10:11.97:229,12,0	0/1:12,1:13:99:222,0,117	0/0:21,0:20:48.08:0,48,636	1/1:14,3:17:17.87:356,18,0	1/1:9,1:5:6.02:150,6,0	1/1:16,5:19:17.26:370,17,0	1/1:39,1:37:11.98:235,12,0	0/0:32,0:31:49.39:0,49,653	0/1:19,0:19:16.52:17,0,246	0/1:29,0:29:0.23:0,0,274	0/1:21,2:22:99:253,0,234	0/1:15,5:20:99:550,0,124	1/1:6,3:9:6.02:172,6,0	1/1:9,1:10:5.99:109,6,0
chr10	43487100	.	CAG	C	956.35	PASS	AB=0.940;AC=18;AF=0.321;AN=56;BaseQRankSum=0.985;DP=611;FS=2.913;HRun=0;HaplotypeScore=293.5223;InbreedingCoeff=-0.1059;MQ=51.98;MQ0=10;MQRankSum=-1.996;QD=2.84;ReadPosRankSum=-4.882;VQSLOD=1.6798;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:15,1:16:34.61:73,0,35	0/0:5,0:5:1.38:0,1,54	0/0:23,2:10:3.54:0,4,125	0/1:47,0:17:51.87:52,0,80	1/1:14,0:14:3.21:40,3,0	0/0:20,0:20:34.90:0,35,347	0/0:23,0:23:35.18:0,35,409	0/1:22,1:20:95.25:205,0,95	0/0:28,0:28:34.60:0,35,479	0/1:40,4:41:99:266,0,296	0/1:19,2:21:15.02:15,0,39	0/0:32,0:32:48.06:0,48,569	0/0:19,1:20:45.51:0,46,437	0/0:23,0:23:15.17:0,15,373	1/1:8,2:9:0.92:31,1,0	0/1:10,2:12:19.23:19,0,168	0/0:24,0:23:44.42:0,44,494	0/1:14,0:14:17.54:18,0,98	0/1:8,1:4:9.80:17,0,10	0/1:19,0:17:9.12:115,0,9	1/1:30,4:30:7.97:66,8,0	0/0:34,0:33:26.66:0,27,422	0/1:19,1:20:1.51:2,0,165	0/0:28,0:28:5.97:0,6,251	0/1:24,2:25:99:108,0,300	0/1:25,2:24:85.45:85,0,229	0/0:9,0:9:5.19:0,5,43	0/0:3,0:3:7.20:0,7,32
chr10	43487118	.	CGCAAA	C	943.54	PASS	AB=0.902;AC=21;AF=0.375;AN=56;BaseQRankSum=6.436;DP=612;FS=10.711;HRun=0;HaplotypeScore=297.8966;InbreedingCoeff=-0.6019;MQ=53.93;MQ0=17;MQRankSum=-1.410;QD=2.08;ReadPosRankSum=-1.874;VQSLOD=0.5967;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:11,1:13:99:100,0,302	0/1:4,1:5:41.78:42,0,91	0/0:44,0:13:6.07:0,6,400	0/1:64,0:19:18.80:19,0,211	0/0:11,1:15:4.90:0,5,22	0/1:14,1:15:31.14:31,0,387	0/1:20,1:23:69.98:70,0,494	0/1:25,0:28:5.50:6,0,1274	0/1:23,4:27:99:148,0,637	0/1:35,1:33:55.45:55,0,1225	0/0:13,1:16:15.63:0,16,143	0/1:35,1:36:20.20:20,0,1097	0/0:17,0:17:5.79:0,6,797	0/0:21,0:21:38.64:0,39,927	0/1:4,4:7:76.91:115,0,77	0/1:9,0:9:12.72:13,0,344	0/1:18,0:18:25.39:25,0,628	0/1:6,0:9:82.24:82,0,273	0/1:16,0:10:18.28:18,0,288	0/1:19,0:17:49.12:49,0,151	0/1:17,1:26:99:109,0,171	0/1:30,0:29:73.52:74,0,948	0/0:21,0:20:7.91:0,8,403	0/1:24,1:26:40.76:41,0,476	0/0:21,1:22:11.05:0,11,1012	0/1:24,4:24:64.31:64,0,1041	0/1:6,0:6:14.43:14,0,214	0/1:3,0:3:0.09:0,0,114
chr10	43487122	.	AAC	A	725.89	PASS	AB=0.936;AC=16;AF=0.286;AN=56;BaseQRankSum=5.957;DP=630;FS=21.542;HRun=0;HaplotypeScore=285.8513;InbreedingCoeff=-0.1299;MQ=53.84;MQ0=16;MQRankSum=-3.382;QD=1.93;ReadPosRankSum=1.577;VQSLOD=0.5551;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:13:6.49:0,6,195	0/1:3,4:7:0.43:111,0,0	0/0:51,0:16:19.84:0,20,232	0/1:67,0:20:4.10:4,0,133	0/1:14,1:15:0:0,0,0	0/1:10,4:14:12.69:99,0,13	1/1:10,13:23:19.76:177,20,0	0/1:30,0:30:78.04:78,0,817	0/1:20,7:27:33.22:233,0,33	0/1:35,0:32:53.22:53,0,589	0/0:18,0:18:5.59:0,6,95	0/1:34,0:34:38.49:38,0,398	0/0:18,0:18:10.57:0,11,324	0/1:21,0:21:10.41:10,0,307	0/0:8,0:7:1.63:0,2,50	0/0:9,0:9:14.98:0,15,187	0/1:18,0:17:25.12:25,0,171	0/1:12,0:12:9.81:10,0,125	0/0:20,0:12:7.59:0,8,234	0/1:19,1:18:25.18:25,0,118	0/1:30,0:29:3.27:3,0,162	0/0:29,0:27:11.37:0,11,527	0/1:20,0:19:8.53:9,0,281	0/0:26,0:26:11.32:0,11,172	0/0:24,0:23:9.20:0,9,536	0/0:28,0:24:23.21:0,23,658	0/0:7,0:7:11.49:0,11,171	0/0:3,0:3:8.96:0,9,91
chr10	43487132	.	C	CACAA	1119.76	PASS	AB=0.961;AC=20;AF=0.357;AN=56;BaseQRankSum=8.644;DP=607;FS=19.119;HRun=0;HaplotypeScore=285.9354;InbreedingCoeff=-0.4263;MQ=51.78;MQ0=14;MQRankSum=-3.145;QD=3.59;ReadPosRankSum=-1.441;VQSLOD=0.9343;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:11,0:11:30.54:31,0,178	0/1:7,0:7:29.19:29,0,62	0/0:45,0:14:20.61:0,21,316	0/0:70,0:19:28.85:0,29,273	1/1:14,0:14:10.99:56,11,0	0/1:11,0:11:21.25:21,0,68	0/1:24,0:24:19.76:20,0,80	0/0:31,0:31:29.09:0,29,1098	0/1:27,0:28:99:166,0,120	0/0:36,0:31:27.54:0,28,766	0/1:19,0:19:28.06:28,0,87	0/1:29,1:32:99:415,0,407	0/1:16,1:17:28.67:29,0,401	0/1:22,0:22:99:110,0,377	0/1:8,0:7:28.68:29,0,36	0/1:8,0:8:20.66:21,0,148	0/0:14,0:13:23.10:0,23,280	0/0:11,0:11:15.04:0,15,221	0/1:22,0:15:20.05:20,0,262	0/1:16,0:16:70.80:71,0,106	0/0:34,0:32:13.32:0,13,241	0/1:19,3:21:27.93:28,0,544	0/1:18,0:17:34.49:34,0,257	0/1:20,1:21:39.74:40,0,189	0/0:24,0:23:27.82:0,28,639	0/0:27,0:25:2.83:0,3,669	0/1:5,2:7:55.99:56,0,158	0/1:4,1:4:43.35:82,0,43
chr10	43487148	.	TGCGCC	T	4291.53	PASS	AB=0.935;AC=40;AF=0.714;AN=56;BaseQRankSum=-1.215;DP=349;FS=19.722;HRun=0;HaplotypeScore=156.5889;InbreedingCoeff=-0.1166;MQ=66.25;MQ0=3;MQRankSum=-1.363;QD=14.31;ReadPosRankSum=-0.205;VQSLOD=2.9512;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:5,0:5:59:59,0,84	1/1:4,0:4:6.02:75,6,0	0/1:20,0:15:19.65:20,0,300	0/0:43,0:16:32.25:0,32,271	0/1:8,0:8:0.01:0,0,0	1/1:6,0:6:5.97:91,6,0	1/1:14,0:14:22.52:215,23,0	0/1:19,0:19:89.47:323,0,89	1/1:15,0:15:29.83:372,30,0	0/1:10,5:14:70.89:362,0,71	1/1:11,0:11:1.01:32,1,0	1/1:20,0:20:43.21:396,43,0	0/1:11,0:10:76.72:112,0,77	1/1:11,0:12:14.30:158,14,0	1/1:4,1:4:6.49:112,6,0	1/1:4,2:6:18.06:353,18,0	0/1:7,0:8:36.71:129,0,37	0/1:6,1:7:15:29,0,15	0/1:8,0:7:43.84:44,0,212	1/1:7,0:7:13.98:139,14,0	0/1:26,0:25:31.20:172,0,31	1/1:13,0:13:18.42:206,18,0	1/1:6,0:6:17.77:152,18,0	1/1:15,0:15:2.91:36,3,0	0/1:12,6:18:13.81:367,0,14	1/1:9,3:11:3.36:240,3,0	0/1:6,0:6:54.05:98,0,54	0/0:3,0:2:3.01:0,3,38
chr10	43487157	.	C	CA	840.84	PASS	AB=0.781;AC=14;AF=0.250;AN=56;BaseQRankSum=6.654;DP=302;FS=3.424;HRun=0;HaplotypeScore=147.2001;InbreedingCoeff=-0.2430;MQ=65.69;MQ0=1;MQRankSum=-0.379;QD=6.27;ReadPosRankSum=-1.258;VQSLOD=2.9589;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:5,1:6:8.70:0,9,95	0/0:4,0:4:6.02:0,6,79	0/0:15,0:14:18.91:0,19,237	0/0:27,0:12:5.84:0,6,165	1/1:6,2:8:1.36:3,1,0	0/1:3,3:6:71.62:83,0,72	0/1:11,2:13:34.59:35,0,109	0/0:13,0:13:35.10:0,35,437	0/1:6,9:15:99:332,0,131	0/1:14,1:14:15.64:16,0,247	0/0:9,1:10:0.57:0,1,1	0/1:11,7:18:99:206,0,137	0/1:8,2:9:32.17:32,0,74	0/1:11,1:12:6.74:7,0,107	0/1:1,3:4:6.28:42,0,6	0/1:4,2:6:32.17:78,0,32	0/0:8,0:8:19.99:0,20,221	0/1:5,1:6:35.90:41,0,36	0/0:7,0:6:18.06:0,18,246	0/0:7,0:7:9.50:0,9,121	0/0:23,0:22:5.63:0,6,81	0/1:9,2:11:33.11:33,0,144	0/0:6,0:6:6.02:0,6,73	0/0:13,3:16:5.52:0,6,82	0/0:16,0:16:3.28:0,3,50	0/1:7,3:9:74.45:74,0,170	0/0:4,2:6:12.04:0,12,155	0/0:2,1:2:2.77:0,3,41
chr10	43487461	.	AAG	A	1952.02	PASS	AB=0.871;AC=35;AF=0.625;AN=56;BaseQRankSum=3.299;DP=324;FS=21.970;HRun=0;HaplotypeScore=175.9199;InbreedingCoeff=0.1400;MQ=62.94;MQ0=1;MQRankSum=-2.615;QD=7.45;ReadPosRankSum=3.400;VQSLOD=2.0202;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:3,5:7:1.36:3,1,0	1/1:2,2:4:2.96:20,3,0	0/1:17,1:13:29.28:29,0,169	0/1:24,0:13:28.02:28,0,223	1/1:2,8:10:2.61:17,3,0	1/1:1,8:9:16.81:169,17,0	1/1:2,6:8:2.75:33,3,0	0/0:12,0:12:19.61:0,20,135	1/1:0,7:6:3.01:38,3,0	1/1:5,12:17:48.39:526,48,0	1/1:4,2:6:11.69:73,12,0	0/1:21,0:21:17.87:86,0,18	0/1:8,1:9:13.52:30,0,14	0/1:19,1:20:38.02:71,0,38	1/1:5,12:17:2.82:62,3,0	1/1:1,3:4:2.86:20,3,0	0/0:15,0:15:23.73:0,24,163	1/1:4,6:9:21.02:248,21,0	0/0:6,0:5:11.88:0,12,81	0/1:10,2:12:17.89:21,0,18	0/0:7,0:7:14.70:0,15,100	0/0:6,5:11:13.03:0,13,52	0/1:8,3:11:16.67:22,0,17	0/0:9,2:11:2.33:0,2,8	0/1:4,11:15:2.10:30,0,2	1/1:5,11:16:43.69:388,44,0	0/1:10,3:12:52.60:165,0,53	1/1:2,0:2:5.96:45,6,0
chr10	43487495	.	A	ACAC	1803.69	PASS	AB=0.909;AC=20;AF=0.357;AN=56;BaseQRankSum=13.830;DP=599;FS=66.460;HRun=0;HaplotypeScore=290.2573;InbreedingCoeff=-0.2825;MQ=47.74;MQ0=17;MQRankSum=-8.272;QD=5.17;ReadPosRankSum=3.973;VQSLOD=0.4158;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:16:15.03:0,15,224	0/1:6,0:7:26.15:26,0,116	0/0:56,0:21:45.99:0,46,699	0/0:40,0:17:26.18:0,26,516	0/1:22,5:26:11.69:12,0,160	0/1:16,1:17:70.50:70,0,110	0/0:20,0:19:6.71:0,7,292	0/0:24,0:23:58.96:0,59,996	0/0:10,0:9:0.79:0,1,96	0/1:30,7:37:99:390,0,837	1/1:7,1:8:11.34:103,11,0	0/1:27,1:28:23.73:24,0,609	0/1:11,0:11:55.98:56,0,274	0/1:23,0:23:33.74:34,0,231	0/1:18,0:18:90.54:91,0,103	0/1:5,0:5:28.23:28,0,44	0/0:25,0:25:46.32:0,46,796	0/1:18,0:18:0.97:1,0,491	0/0:21,0:20:45.06:0,45,677	0/1:19,8:27:99:166,0,175	0/0:17,0:15:15.23:0,15,249	0/1:14,7:21:80.36:182,0,80	0/1:21,3:25:99:106,0,164	0/0:18,1:19:23.81:0,24,379	0/1:25,2:27:60.23:60,0,177	0/1:24,4:28:99:439,0,429	0/1:17,2:18:99:115,0,216	1/1:1,1:2:5.85:63,6,0
chr10	43487511	.	ACT	A	3474.74	PASS	AB=0.911;AC=32;AF=0.571;AN=56;BaseQRankSum=4.544;DP=631;FS=8.715;HRun=0;HaplotypeScore=270.6070;InbreedingCoeff=0.1030;MQ=42.79;MQ0=26;MQRankSum=-5.276;QD=7.39;ReadPosRankSum=-0.169;VQSLOD=1.9904;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:17,1:17:14.99:137,15,0	0/1:5,1:6:8.95:9,0,23	0/1:38,0:8:8.75:9,0,91	0/0:39,0:11:19.21:0,19,124	1/1:13,17:28:22.58:246,23,0	0/1:14,1:18:29.92:30,0,31	0/0:18,0:24:11.89:0,12,129	0/1:20,0:19:16.35:16,0,198	0/0:15,0:15:9.51:0,10,54	1/1:15,25:39:99:1083,101,0	1/1:9,3:12:16.64:87,17,0	0/0:30,0:31:23.51:0,24,266	0/1:18,0:18:13.09:13,0,102	0/0:17,1:19:6.41:0,6,91	1/1:14,3:17:13.58:91,14,0	1/1:2,2:6:8.85:68,9,0	0/0:27,0:27:16.31:0,16,316	1/1:2,17:20:27.91:372,28,0	0/1:13,0:12:30.18:30,0,69	0/1:28,3:29:53.58:54,0,54	0/1:18,0:19:32.08:32,0,56	0/1:18,3:23:13.18:13,0,26	0/1:23,2:25:41.13:41,0,80	0/1:22,1:24:21.17:21,0,106	1/1:10,20:30:44.10:435,44,0	1/1:9,15:25:64.83:579,65,0	0/1:19,0:21:50.12:50,0,65	1/1:6,0:4:9.77:57,10,0
chr10	43487512	.	CTCCA	C	2134.56	PASS	AB=0.949;AC=23;AF=0.411;AN=56;BaseQRankSum=6.871;DP=613;FS=33.663;HRun=0;HaplotypeScore=275.0059;InbreedingCoeff=0.0036;MQ=43.05;MQ0=26;MQRankSum=-5.100;QD=5.19;ReadPosRankSum=0.973;VQSLOD=1.3204;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:4,14:17:17.54:290,18,0	0/0:5,0:5:0.87:0,1,26	0/1:39,0:7:8.57:9,0,91	0/0:39,0:10:18.67:0,19,121	0/1:29,0:27:7.15:80,0,7	0/1:17,0:18:25.57:26,0,33	0/0:25,0:24:13.28:0,13,200	0/0:18,0:17:3.79:0,4,218	0/0:16,0:15:10.65:0,11,57	1/1:37,0:36:62.87:750,63,0	0/1:12,0:12:7.84:85,0,8	0/0:29,0:29:23.66:0,24,408	0/0:16,0:16:9.39:0,9,258	0/0:20,0:20:6.92:0,7,212	0/1:14,0:16:48.55:66,0,49	0/0:5,0:6:4.52:0,5,11	0/0:26,0:26:1.90:0,2,631	1/1:19,0:20:10.73:102,11,0	0/1:10,0:11:29.99:30,0,103	0/1:29,0:29:42.01:42,0,114	0/1:23,0:19:32.07:32,0,92	0/1:23,0:23:3.80:4,0,85	0/1:26,0:25:51.43:51,0,237	0/1:25,0:25:14.38:14,0,313	1/1:28,1:29:25.26:187,25,0	1/1:26,0:25:56.89:445,57,0	0/1:17,0:18:54.89:55,0,93	0/1:5,0:5:2.76:38,0,3
chr10	43487514	.	C	CCA	1143.76	PASS	AB=0.890;AC=30;AF=0.577;AN=52;BaseQRankSum=-0.920;DP=631;FS=2.785;HRun=0;HaplotypeScore=284.4181;InbreedingCoeff=0.1571;MQ=43.00;MQ0=28;MQRankSum=-2.487;QD=2.76;ReadPosRankSum=-1.817;VQSLOD=1.9335;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:10.86:0,11,55	1/1:5,0:5:3.78:10,4,0	./.	./.	0/1:29,0:28:9.32:9,0,64	1/1:21,0:20:0.47:1,0,0	1/1:26,0:24:1.25:3,1,0	0/1:16,0:15:0:0,0,0	1/1:16,0:17:0.67:2,1,0	0/1:37,0:36:12.90:13,0,104	0/0:13,0:13:5.62:0,6,43	0/1:20,9:29:15.53:172,0,16	0/1:8,8:17:45.14:163,0,45	0/1:20,1:21:4.88:126,0,5	1/1:14,1:17:8.82:93,9,0	1/1:5,0:6:9.03:126,9,0	0/0:27,0:27:13.53:0,14,222	0/0:21,0:21:17.15:0,17,108	1/1:12,0:11:0.89:2,1,0	1/1:32,0:29:5.56:28,6,0	0/1:23,0:19:0.03:0,0,0	1/1:16,6:25:3.76:48,4,0	0/1:24,3:26:10.70:204,0,11	0/1:9,14:27:31.57:258,0,32	0/0:29,0:29:10.05:0,10,103	0/0:29,0:28:3.89:0,4,45	0/1:18,0:18:0.03:0,0,0	1/1:7,0:5:2.99:23,3,0
chr10	43487525	.	CA	C	644.71	PASS	AB=0.972;AC=14;AF=0.250;AN=56;BaseQRankSum=12.940;DP=688;FS=97.813;HRun=1;HaplotypeScore=259.0582;InbreedingCoeff=-0.2058;MQ=41.03;MQ0=33;MQRankSum=-10.629;QD=2.04;ReadPosRankSum=-1.312;VQSLOD=-0.6688;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:24:31.13:0,31,280	1/1:5,0:5:5.89:27,6,0	0/0:34,0:6:17.54:0,18,199	0/0:35,0:5:15.05:0,15,200	0/0:28,3:29:4.65:0,5,215	0/1:21,1:21:26.17:36,0,26	0/1:28,0:26:2.90:3,0,322	0/0:20,0:18:35.68:0,36,565	0/0:17,0:15:7.83:0,8,93	0/1:45,0:42:99:157,0,914	0/0:18,0:18:13.34:0,13,229	0/1:29,0:29:37.72:38,0,231	0/1:18,0:18:12.97:13,0,217	0/0:24,0:23:9.17:0,9,252	0/1:18,0:17:25.37:25,0,142	0/0:7,0:7:13.84:0,14,131	0/0:28,0:28:54.18:0,54,734	0/0:23,0:23:18.26:0,18,428	0/0:13,0:12:9.01:0,9,226	0/1:29,3:29:99:162,0,170	0/0:30,0:25:24.08:0,24,314	0/1:28,1:29:41.65:42,0,120	0/1:24,2:24:30.36:30,0,217	0/0:32,0:32:17.63:0,18,404	0/0:34,0:34:1.20:0,1,493	0/1:32,1:32:99:163,0,608	0/1:19,0:19:74.21:74,0,240	0/1:11,1:10:26.03:26,0,252
chr10	43487529	.	C	CCA	352.94	PASS	AB=0.989;AC=11;AF=0.196;AN=56;BaseQRankSum=10.792;DP=715;FS=26.641;HRun=0;HaplotypeScore=269.6611;InbreedingCoeff=-0.0830;MQ=42.04;MQ0=31;MQRankSum=-9.333;QD=1.51;ReadPosRankSum=-1.877;VQSLOD=0.4452;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,1:26:33.08:0,33,435	1/1:6,0:6:6.02:81,6,0	0/0:33,0:8:18.13:0,18,261	0/0:37,0:7:18.06:0,18,256	0/0:31,0:29:23.90:0,24,345	0/0:22,0:21:4.28:0,4,63	0/0:29,0:27:14.08:0,14,460	0/0:18,1:18:5.04:0,5,530	0/1:17,0:15:18.24:18,0,57	0/0:49,0:45:50.78:0,51,1248	0/0:20,0:20:25.82:0,26,367	0/0:28,0:28:7.27:0,7,190	0/0:19,0:19:2.86:0,3,202	0/0:23,0:22:15.69:0,16,211	0/1:18,0:17:32.20:32,0,116	0/0:8,0:8:12.08:0,12,77	0/0:33,0:33:63.59:0,64,831	0/0:25,0:25:21.52:0,22,489	0/1:13,1:13:86.60:87,0,253	0/1:32,0:29:33.81:34,0,185	0/0:32,0:27:26.74:0,27,374	0/1:31,0:31:66.79:67,0,129	0/1:28,0:26:32.79:33,0,110	0/0:32,0:32:26.56:0,27,311	0/1:35,0:35:0.19:0,0,597	0/1:33,1:33:93.95:94,0,627	0/1:19,0:19:49.04:49,0,165	0/0:14,0:12:17.57:0,18,366
chr10	43488221	.	G	GTC	1412.75	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=-0.304;DP=505;FS=0.000;HRun=0;HaplotypeScore=72.0165;InbreedingCoeff=0.6944;MQ=75.60;MQ0=10;MQRankSum=0.290;QD=8.56;ReadPosRankSum=-0.584;VQSLOD=2.5699;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:77.74:0,78,614	0/0:3,0:4:5.99:0,6,50	0/0:41,0:26:51.44:0,51,611	0/0:35,0:20:37.22:0,37,421	0/0:9,0:8:11.54:0,12,97	0/0:13,0:13:23.92:0,24,192	0/0:16,0:16:41.51:0,42,325	1/1:13,0:13:35.94:313,36,0	0/0:22,0:22:53.40:0,53,437	0/0:12,0:12:29.93:0,30,259	0/0:10,0:10:23.97:0,24,199	0/0:16,0:16:23.25:0,23,304	0/0:9,0:9:14.98:0,15,125	0/0:12,0:12:8.25:0,8,178	0/0:12,0:12:9.98:0,10,173	0/1:7,0:6:9.39:9,0,41	0/0:30,0:30:68.31:0,68,739	0/0:19,0:19:44.81:0,45,353	1/1:11,0:11:23.98:214,24,0	1/1:21,0:21:42:406,42,0	1/1:10,26:36:3.01:56,3,0	0/1:12,0:12:16.46:16,0,100	0/0:19,0:19:31.66:0,32,385	0/1:37,0:37:0.92:1,0,477	0/0:13,0:13:26.96:0,27,229	0/0:13,0:13:38.81:0,39,317	1/1:16,0:15:31.69:281,32,0	1/1:12,0:12:32.95:299,33,0
chr10	43488222	.	T	TCA	594.35	PASS	AB=0.970;AC=27;AF=0.587;AN=46;BaseQRankSum=-1.682;DP=531;FS=1.189;HRun=0;HaplotypeScore=84.9635;InbreedingCoeff=0.3099;MQ=74.10;MQ0=10;MQRankSum=2.334;QD=2.29;ReadPosRankSum=-0.300;VQSLOD=1.5041;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:38:2.56:0,3,14	./.	./.	./.	1/1:9,0:8:3:26,3,0	0/0:12,0:14:2.84:0,3,14	0/0:14,0:16:2.84:0,3,14	1/1:13,0:13:3.01:30,3,0	0/0:19,0:22:5.66:0,6,28	1/1:14,0:14:0.47:1,0,0	./.	1/1:16,3:21:3.01:44,3,0	0/1:9,0:9:0:0,0,0	1/1:9,3:12:3.01:44,3,0	1/1:14,0:14:9.01:90,9,0	1/1:4,3:6:3.01:43,3,0	0/0:30,0:32:20.88:0,21,202	0/0:14,0:17:5.68:0,6,28	1/1:11,0:11:3.01:39,3,0	1/1:21,0:21:5.99:48,6,0	1/1:37,0:37:2.86:31,3,0	1/1:11,5:18:6.02:87,6,0	0/1:20,0:20:13.71:37,0,14	0/1:35,4:40:24.73:178,0,25	0/0:14,0:14:2.46:0,2,9	./.	0/0:17,0:16:4.36:0,4,34	1/1:13,0:13:3.48:31,3,0
chr10	43488879	.	GAGGGCAGCCTGGTCTACAGAGCTAGCTCT	G	4055.88	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=9.303;DP=557;FS=4.568;HRun=0;HaplotypeScore=375.2212;InbreedingCoeff=0.9458;MQ=60.87;MQ0=4;MQRankSum=-4.727;QD=48.28;ReadPosRankSum=-0.467;VQSLOD=1.1696;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:90.29:0,90,10100	0/0:6,0:6:18.05:0,18,1424	0/0:17,0:14:26.98:0,27,692	0/0:28,0:23:35.17:0,35,1330	0/0:17,0:17:48.16:0,48,5606	0/0:13,0:13:33.11:0,33,3855	0/0:27,0:27:69.22:0,69,7433	0/0:22,0:21:48.15:0,48,3894	0/0:21,0:21:57.17:0,57,5152	1/1:1,13:14:30.07:920,30,0	1/1:2,8:10:3.01:130,3,0	0/0:16,0:16:39.13:0,39,4032	0/0:21,0:21:60.18:0,60,6481	0/0:20,0:20:54.19:0,54,6378	0/0:20,0:20:51.16:0,51,4994	0/0:15,0:15:36.11:0,36,3911	0/0:37,0:37:96.25:0,96,8778	1/1:5,22:27:12.04:723,12,0	0/0:17,0:15:33.11:0,33,2078	0/0:15,0:14:39.13:0,39,4424	0/0:45,0:45:99:0,117,11961	0/0:13,0:13:33.11:0,33,3207	0/0:15,0:15:42.13:0,42,4603	0/0:27,0:27:72.23:0,72,8917	1/1:3,13:16:18.06:1358,18,0	1/1:2,15:17:32.62:925,33,0	0/0:13,0:13:30.09:0,30,2400	0/0:12,0:12:27.09:0,27,2978
chr10	43489209	.	AAAACACACACACACACACACACACACAC	A	1379.97	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=4.525;DP=458;FS=19.920;HRun=0;HaplotypeScore=258.8007;InbreedingCoeff=0.8819;MQ=61.48;MQ0=12;MQRankSum=-2.890;QD=32.09;ReadPosRankSum=2.595;VQSLOD=0.9687;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:74.88:0,75,1680	1/1:5,0:5:9:89,9,0	0/0:34,0:18:44.30:0,44,877	0/0:33,0:19:47.29:0,47,1279	0/0:10,0:10:29.68:0,30,1010	1/1:1,10:13:15.05:999,15,0	1/1:1,10:11:5.37:202,5,0	0/0:24,0:22:54.05:0,54,660	1/1:1,13:14:3.01:227,3,0	0/0:12,0:12:36.08:0,36,1716	0/0:11,0:10:29.76:0,30,2031	0/0:8,0:8:21:0,21,973	0/0:9,0:9:24.07:0,24,1472	0/0:9,0:9:26.92:0,27,1310	0/0:13,0:13:35.67:0,36,1413	0/0:7,0:7:17.99:0,18,1040	0/0:36,0:36:93.99:0,94,5683	0/0:22,0:22:57.17:0,57,4132	0/0:10,0:7:18.01:0,18,487	0/0:19,0:18:51.57:0,52,1723	0/0:39,0:39:99:0,102,5453	0/0:12,0:12:33.04:0,33,1442	0/0:9,0:9:27.05:0,27,1009	0/0:18,0:18:44.80:0,45,2549	0/0:10,0:10:27.06:0,27,1299	0/0:13,0:11:33.03:0,33,1461	0/0:17,0:17:41.98:0,42,956	0/0:10,0:10:30.09:0,30,1527
chr10	43489211	.	AACAC	A	812.65	PASS	AB=0.929;AC=33;AF=0.825;AN=40;BaseQRankSum=1.439;DP=464;FS=0.000;HRun=0;HaplotypeScore=84.6641;InbreedingCoeff=0.2980;MQ=58.64;MQ0=14;MQRankSum=-0.749;QD=2.97;ReadPosRankSum=1.510;VQSLOD=1.5304;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	1/1:8,0:9:3.60:9,4,0	1/1:12,0:12:11.99:106,12,0	1/1:11,0:11:0.47:1,0,0	./.	1/1:14,0:14:3:28,3,0	0/0:13,0:13:1.55:0,2,4	./.	1/1:9,0:9:3.01:46,3,0	1/1:9,0:9:2.63:11,3,0	1/1:9,0:9:6.02:89,6,0	0/0:10,0:13:8.55:0,9,95	0/0:6,0:7:2.74:0,3,12	0/1:36,1:39:21.28:21,0,326	1/1:14,8:22:15.05:230,15,0	./.	1/1:16,0:19:0.68:2,1,0	1/1:39,0:38:4.55:30,5,0	1/1:11,0:12:5.98:64,6,0	1/1:10,0:10:3:25,3,0	1/1:13,5:18:8.97:114,9,0	./.	1/1:14,0:12:2.93:21,3,0	1/1:13,0:16:6.01:56,6,0	1/1:8,0:10:8.75:68,9,0
chr10	43489361	.	AAAAC	A	1671.92	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=2.141;DP=532;FS=0.543;HRun=0;HaplotypeScore=90.2615;InbreedingCoeff=0.6841;MQ=39.67;MQ0=41;MQRankSum=-0.144;QD=11.61;ReadPosRankSum=2.293;VQSLOD=3.0139;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:32:46.18:0,46,300	0/1:5,0:5:9.70:10,0,18	0/0:56,0:4:8.81:0,9,63	0/0:49,0:10:13:0,13,89	1/1:10,0:10:7.54:35,8,0	0/0:13,0:12:11.99:0,12,114	0/0:24,0:24:14.59:0,15,202	1/1:9,0:9:14.83:174,15,0	0/1:23,0:22:6.30:6,0,58	0/0:16,0:15:17.99:0,18,209	0/0:4,0:3:8.93:0,9,73	0/0:20,0:20:41.60:0,42,712	0/0:15,0:15:32.92:0,33,493	0/0:13,0:12:32.81:0,33,426	0/0:13,0:13:4.66:0,5,73	0/1:13,0:13:11.21:11,0,77	0/0:30,0:27:61.73:0,62,1040	0/0:20,0:20:28.39:0,28,208	1/1:12,10:14:13.63:313,14,0	1/1:11,3:11:14.50:220,14,0	1/1:22,0:21:34.99:585,35,0	0/0:13,0:11:30:0,30,609	0/0:15,0:14:33.03:0,33,634	0/0:25,0:21:38.12:0,38,734	0/0:12,0:8:8.99:0,9,96	0/0:15,0:14:19.79:0,20,130	1/1:14,2:14:11.86:241,12,0	1/1:8,1:6:15.05:267,15,0
chr10	43489363	.	AACACAC	A	1504	PASS	AB=1.000;AC=16;AF=0.286;AN=56;BaseQRankSum=1.614;DP=523;FS=4.758;HRun=0;HaplotypeScore=98.9400;InbreedingCoeff=0.7153;MQ=38.75;MQ0=42;MQRankSum=-3.922;QD=12.75;ReadPosRankSum=3.045;VQSLOD=2.3305;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:27:24.08:0,24,328	1/1:3,1:5:12.04:232,12,0	0/0:58,0:4:3.01:0,3,71	0/0:47,0:9:9.37:0,9,117	1/1:2,0:9:15.02:197,15,0	1/1:4,7:10:9.03:157,9,0	1/1:16,4:20:20.95:310,21,0	0/1:10,0:9:29.37:29,0,64	1/1:5,17:21:15.05:278,15,0	0/0:20,0:18:24.08:0,24,539	0/0:3,0:6:5.05:0,5,42	0/0:18,0:18:24.08:0,24,771	0/0:14,0:14:21.07:0,21,588	0/0:13,0:12:15.05:0,15,415	1/1:5,8:13:15.03:231,15,0	1/1:10,2:13:12.93:248,13,0	0/0:30,0:27:36.12:0,36,1075	0/0:17,0:18:18.06:0,18,403	0/0:21,0:13:23.32:0,23,178	0/0:14,0:11:14.03:0,14,97	0/0:24,0:23:31.22:0,31,195	0/0:13,0:12:27.09:0,27,709	0/0:16,0:15:30.10:0,30,795	0/0:26,0:22:30.10:0,30,773	0/0:10,0:10:6.02:0,6,147	0/0:13,0:12:12.04:0,12,263	0/1:15,0:13:12.78:13,0,38	0/0:10,0:7:16.06:0,16,115
chr10	43490001	.	A	AT	4790.03	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-1.133;DP=507;FS=4.378;HRun=2;HaplotypeScore=70.7964;InbreedingCoeff=0.9369;MQ=73.47;MQ0=13;MQRankSum=-2.208;QD=16.07;ReadPosRankSum=0.367;VQSLOD=4.7495;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:28:70.85:520,71,0	1/1:1,5:6:4.26:38,4,0	0/0:51,0:18:36.28:0,36,316	0/0:43,0:17:29.85:0,30,252	1/1:3,13:16:28.20:238,28,0	1/1:12,0:12:28.78:202,29,0	1/1:25,1:26:65.15:564,65,0	1/1:19,0:17:41.46:328,41,0	1/1:12,1:13:30.09:239,30,0	1/1:14,1:15:37.26:326,37,0	1/1:2,7:9:17.89:159,18,0	0/0:12,0:12:35.90:0,36,318	0/0:9,0:9:23.91:0,24,186	0/0:19,0:17:38.02:0,38,313	1/1:1,9:10:2.68:40,3,0	1/1:4,12:16:23.06:218,23,0	0/0:27,0:26:73.06:0,73,638	1/1:17,0:15:38.71:283,39,0	1/1:16,0:11:13.32:173,13,0	1/1:15,1:16:43.39:301,43,0	1/1:16,2:15:39.65:341,40,0	0/0:10,0:10:29.83:0,30,243	0/0:14,0:14:28.99:0,29,247	0/0:24,0:24:62.79:0,63,533	1/1:8,0:8:20.39:144,20,0	1/1:18,1:18:38.21:297,38,0	1/1:15,0:15:40.74:297,41,0	1/1:6,10:15:10.81:81,11,0
chr10	43490252	.	AAG	A	2778.79	PASS	AB=1.000;AC=35;AF=0.625;AN=56;BaseQRankSum=5.458;DP=342;FS=31.115;HRun=0;HaplotypeScore=57.9819;InbreedingCoeff=0.7546;MQ=55.09;MQ0=5;MQRankSum=-0.371;QD=12.81;ReadPosRankSum=-5.361;VQSLOD=0.8697;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:23,1:24:49.07:349,49,0	1/1:2,0:1:3:26,3,0	0/0:22,0:10:12.97:0,13,176	0/0:8,0:4:7.74:0,8,44	1/1:9,0:8:20.90:161,21,0	0/1:14,0:14:5.92:102,0,6	1/1:7,2:8:15.87:118,16,0	1/1:26,4:29:53.07:447,53,0	1/1:12,0:12:6.95:108,7,0	1/1:13,0:12:10.45:230,10,0	1/1:6,0:5:11.95:96,12,0	0/0:24,0:24:22.94:0,23,447	0/0:11,0:11:17.05:0,17,218	0/0:8,0:8:11.49:0,11,111	1/1:12,0:12:13.25:130,13,0	0/1:6,0:6:3.02:65,0,3	0/0:24,0:23:24.39:0,24,331	1/1:10,1:10:14.18:96,14,0	1/1:14,2:14:35.62:266,36,0	0/1:6,0:4:0.66:18,0,1	1/1:10,4:12:15.19:141,15,0	0/0:8,0:8:20.86:0,21,169	0/0:8,0:8:23.51:0,24,239	0/0:12,0:12:21.22:0,21,227	1/1:12,0:11:32.04:270,32,0	1/1:10,0:10:13.23:105,13,0	1/1:5,1:6:17.96:155,18,0	1/1:5,0:5:13.52:100,14,0
chr10	43490253	.	AG	A	3224.61	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=6.989;DP=332;FS=23.987;HRun=1;HaplotypeScore=51.7152;InbreedingCoeff=0.8744;MQ=58.07;MQ0=4;MQRankSum=-0.353;QD=15.50;ReadPosRankSum=-3.542;VQSLOD=1.3069;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:23,1:24:52.72:414,53,0	1/1:2,0:1:3:26,3,0	0/0:23,0:11:16.10:0,16,181	0/0:9,0:5:10.76:0,11,80	1/1:9,0:8:20.90:160,21,0	1/1:14,0:14:36.03:228,36,0	1/1:9,0:8:17.43:124,17,0	1/1:26,2:27:67.39:498,67,0	1/1:9,1:10:19.14:139,19,0	1/1:14,0:13:13.42:253,13,0	1/1:6,0:5:11.95:96,12,0	0/0:23,0:23:16.27:0,16,339	0/0:11,0:11:16.64:0,17,184	0/0:7,0:7:1.88:0,2,70	1/1:12,0:12:24.23:160,24,0	1/1:6,0:6:11.44:86,11,0	0/0:22,0:21:30.39:0,30,295	1/1:10,0:9:6.78:83,7,0	1/1:13,1:12:35.72:277,36,0	1/1:4,2:4:10.36:65,10,0	1/1:12,0:11:23.47:172,23,0	0/0:8,0:8:20.58:0,21,152	0/0:9,0:9:26.36:0,26,225	0/0:12,0:12:10.19:0,10,174	1/1:12,0:11:30:264,30,0	1/1:8,0:8:11.99:102,12,0	1/1:7,0:7:20.92:167,21,0	1/1:5,0:5:14.95:117,15,0
chr10	43490275	.	C	CA	7256.68	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=1.964;DP=299;FS=0.569;HRun=2;HaplotypeScore=42.0858;InbreedingCoeff=0.9309;MQ=92.95;MQ0=0;MQRankSum=-3.831;QD=37.41;ReadPosRankSum=0.658;VQSLOD=4.9045;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,17:17:33.11:495,33,0	1/1:0,2:2:6.02:90,6,0	0/0:17,0:13:27.55:0,28,339	0/0:20,0:17:44.40:0,44,581	1/1:0,14:13:36.08:513,36,0	1/1:0,14:14:39.13:584,39,0	1/1:0,10:10:27.09:404,27,0	1/1:2,29:30:87.29:1278,87,0	1/1:1,9:10:24.08:360,24,0	1/1:1,12:12:30.09:430,30,0	1/1:0,6:6:15.05:225,15,0	0/0:12,0:12:36.12:0,36,467	0/0:9,0:9:24.06:0,24,297	0/0:3,0:3:9.03:0,9,117	1/1:0,9:9:21.07:315,21,0	1/1:0,4:4:9.03:135,9,0	0/0:15,0:15:42.14:0,42,541	1/1:0,8:7:18.06:270,18,0	1/1:1,8:9:27.09:405,27,0	1/1:1,3:3:6.02:90,6,0	1/1:1,13:14:36.12:539,36,0	0/0:10,0:10:30.10:0,30,383	0/0:7,0:7:21.07:0,21,272	0/0:12,0:12:33.06:0,33,397	1/1:0,11:11:33.11:495,33,0	1/1:1,5:6:15.05:225,15,0	1/1:1,7:8:18.06:270,18,0	1/1:0,4:4:9.03:135,9,0
chr10	43490396	.	T	TTTTCTC	1146.96	PASS	AB=1.000;AC=17;AF=0.315;AN=54;BaseQRankSum=4.167;DP=240;FS=6.722;HRun=0;HaplotypeScore=56.4563;InbreedingCoeff=0.3282;MQ=87.03;MQ0=10;MQRankSum=-0.554;QD=12.33;ReadPosRankSum=1.783;VQSLOD=1.0255;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:10,0:10:3.01:48,3,0	0/0:1,0:1:2.99:0,3,24	0/0:35,0:13:21.20:0,21,220	0/0:46,0:25:32.62:0,33,274	0/0:3,0:3:3:0,3,25	0/0:7,0:7:20.97:0,21,224	0/0:4,0:4:8.99:0,9,75	0/1:20,0:17:72.27:72,0,289	0/0:4,0:4:2.91:0,3,73	1/1:7,0:7:21.03:402,21,0	1/1:5,0:5:15.03:233,15,0	1/1:3,0:3:3.01:51,3,0	0/0:5,0:5:8.98:0,9,73	0/0:3,0:3:3.01:0,3,34	0/0:7,0:7:9:0,9,100	0/0:2,0:2:5.92:0,6,39	0/1:15,0:12:86.17:122,0,86	1/1:1,8:10:6.02:145,6,0	0/1:7,0:7:33.84:34,0,67	0/1:10,0:8:10.70:119,0,11	0/0:8,0:8:17.71:0,18,147	0/0:7,0:7:14.21:0,14,115	0/0:4,0:4:12.01:0,12,163	0/0:5,0:5:12:0,12,193	./.	1/1:1,0:1:3.01:81,3,0	0/1:5,0:5:1.09:1,0,37	0/0:4,0:4:5.99:0,6,48
chr10	43490815	.	CTT	C	4251.99	PASS	AB=0.582;AC=24;AF=0.429;AN=56;BaseQRankSum=-3.838;DP=519;FS=19.248;HRun=13;HaplotypeScore=77.7639;InbreedingCoeff=0.8364;MQ=79.53;MQ0=0;MQRankSum=0.134;QD=17.72;ReadPosRankSum=1.484;VQSLOD=2.2186;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:31:35.73:0,36,235	0/0:0,0:7:14.97:0,15,51	0/0:17,1:18:20.07:0,20,222	0/0:16,0:15:17.95:0,18,175	0/0:14,0:14:35.56:0,36,445	0/0:4,0:24:42.94:0,43,181	0/0:4,0:18:35.69:0,36,177	1/1:14,16:33:5.33:370,5,0	0/0:3,1:15:6.34:0,6,82	1/1:1,23:25:62.78:636,63,0	1/1:0,7:8:20.75:186,21,0	0/0:14,0:15:35.55:0,36,430	0/0:15,0:15:40.30:0,40,470	0/0:23,0:23:60.16:0,60,812	0/1:2,3:14:48.80:49,0,50	0/1:4,1:10:4.54:5,0,131	0/0:28,0:29:69.17:0,69,906	1/1:4,12:16:33.03:320,33,0	1/1:4,23:30:68.14:643,68,0	1/1:4,16:21:40.42:370,40,0	1/1:7,12:20:30.91:316,31,0	0/0:10,0:12:28.34:0,28,321	0/0:8,0:10:21.01:0,21,251	0/0:24,1:29:38:0,38,690	1/1:4,10:15:29.94:333,30,0	1/1:3,19:23:49.76:454,50,0	1/1:2,10:13:23.96:282,24,0	1/1:2,10:12:30.02:289,30,0
chr10	43492020	.	C	CT	3444.19	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-11.622;DP=621;FS=0.429;HRun=3;HaplotypeScore=60.6987;InbreedingCoeff=0.9987;MQ=86.81;MQ0=0;MQRankSum=-1.783;QD=36.25;ReadPosRankSum=0.864;VQSLOD=4.1420;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,147,1750	1/1:1,9:10:27.09:377,27,0	0/0:25,0:26:57.09:0,57,651	0/0:26,0:26:50.56:0,51,619	0/0:17,0:17:42.13:0,42,504	1/1:0,25:25:60.20:840,60,0	1/1:0,23:23:66.22:924,66,0	0/0:29,0:29:78.23:0,78,926	1/1:1,36:37:93.31:1302,93,0	0/0:30,0:30:84.24:0,84,990	0/0:15,0:15:45.14:0,45,540	0/0:17,0:17:51.16:0,51,612	0/0:23,0:23:66.20:0,66,792	0/0:24,0:24:69.21:0,69,824	0/0:25,0:25:72.22:0,72,864	0/0:14,0:14:42.13:0,42,504	0/0:28,0:28:84.26:0,84,1008	0/0:16,0:16:48.13:0,48,562	0/0:18,0:18:51.13:0,51,590	0/0:18,0:18:51.16:0,51,612	0/0:35,0:35:99:0,99,1188	0/0:20,0:20:48.13:0,48,564	0/0:10,0:10:27.08:0,27,324	0/0:26,0:26:72.22:0,72,864	0/0:11,0:11:30.09:0,30,360	0/0:22,0:22:66.20:0,66,792	0/0:17,0:17:48.15:0,48,576	0/0:9,0:9:24.07:0,24,288
chr10	43492090	.	CTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	C	127.58	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=1.677;DP=594;FS=4.040;HRun=0;HaplotypeScore=371.4301;InbreedingCoeff=0.6165;MQ=61.98;MQ0=24;MQRankSum=-1.388;QD=4.91;ReadPosRankSum=0.179;VQSLOD=1.5055;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:50.74:0,51,2291	0/0:3,0:4:9.03:0,9,501	0/0:43,0:21:11.93:0,12,234	0/0:50,0:23:24.08:0,24,828	1/1:9,17:26:3.01:205,3,0	0/0:13,0:14:24.08:0,24,1522	0/0:13,0:13:21.04:0,21,1046	0/0:17,0:16:21.07:0,21,1100	0/0:16,0:15:14.79:0,15,542	0/0:19,0:18:33.11:0,33,2583	0/0:10,0:10:15.05:0,15,1200	0/0:18,0:18:44.83:0,45,4573	0/0:16,0:16:18.53:0,19,1032	0/0:15,0:14:27.04:0,27,2305	0/0:18,0:18:33.11:0,33,2669	0/0:13,0:20:27.08:0,27,2359	0/0:18,0:28:30.10:0,30,2318	0/0:18,0:18:45.15:0,45,4101	0/0:16,0:15:33.11:0,33,1995	0/0:13,0:12:18.06:0,18,1113	0/0:41,0:36:57.03:0,57,4042	0/0:19,0:18:21.07:0,21,1715	0/0:18,0:17:27.09:0,27,2324	0/0:28,0:39:57.22:0,57,5279	0/0:4,0:8:9.03:0,9,887	0/0:25,0:22:39.13:0,39,2917	0/0:15,0:20:27.09:0,27,2147	0/0:5,0:6:15.05:0,15,1228
chr10	43492325	.	CT	C	480.45	PASS	AB=0.889;AC=17;AF=0.304;AN=56;BaseQRankSum=3.069;DP=429;FS=20.161;HRun=14;HaplotypeScore=58.8012;InbreedingCoeff=0.4180;MQ=58.17;MQ0=7;MQRankSum=0.425;QD=3.41;ReadPosRankSum=0.540;VQSLOD=-0.6617;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:3,0:28:29.25:0,29,143	0/1:8,0:8:2.72:3,0,24	0/0:26,0:13:9.50:0,10,94	0/1:14,0:4:10.10:11,0,10	1/1:1,0:4:5.15:14,5,0	0/1:16,0:16:4.42:4,0,55	0/1:12,1:12:3.49:3,0,6	0/0:33,1:32:46.17:0,46,384	0/0:9,0:8:18.01:0,18,162	1/1:5,1:7:13.93:88,14,0	1/1:7,8:15:14.79:102,15,0	0/0:8,0:8:8.74:0,9,80	0/1:5,1:6:11.64:12,0,33	0/0:13,0:13:17.81:0,18,145	0/0:6,0:7:6.39:0,6,32	0/0:4,0:9:11.36:0,11,68	0/0:42,0:42:68.75:0,69,756	1/1:6,4:10:12.81:119,13,0	0/0:14,2:17:0.59:0,1,258	0/0:16,0:16:17.59:0,18,169	0/0:14,0:14:26.50:0,27,224	0/0:18,0:18:33.56:0,34,298	0/1:14,1:15:4.34:4,0,143	0/0:24,0:24:42.42:0,42,519	0/1:2,8:9:12.72:67,0,13	1/1:11,11:21:30.90:223,31,0	0/0:8,0:8:18.63:0,19,150	0/0:15,0:13:24.47:0,24,215
chr10	43492331	.	TTTTTTTTTC	T	794.18	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=3.000;DP=418;FS=5.186;HRun=0;HaplotypeScore=110.7579;InbreedingCoeff=0.6434;MQ=55.49;MQ0=8;MQRankSum=-4.966;QD=16.55;ReadPosRankSum=0.470;VQSLOD=2.2227;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:45.15:0,45,1463	1/1:4,3:7:8.79:231,9,0	0/0:23,0:10:7.27:0,7,116	0/0:13,0:3:3.22:0,3,13	0/1:4,0:4:19.03:46,0,19	1/1:11,3:14:1.24:324,1,0	1/1:12,2:12:17.91:309,18,0	0/0:32,0:30:48.08:0,48,1537	1/1:9,0:8:2.98:23,3,0	0/0:10,0:10:16.61:0,17,420	0/0:9,0:9:12.04:0,12,342	0/0:5,0:5:12.04:0,12,435	0/0:6,0:6:12.04:0,12,351	0/0:12,0:12:24.07:0,24,778	0/0:9,0:9:15.05:0,15,412	0/0:11,0:11:15.05:0,15,500	0/0:43,0:43:99:0,103,3771	0/0:10,0:10:30.10:0,30,771	0/0:17,0:17:30.06:0,30,824	0/0:15,0:15:24.08:0,24,803	0/0:10,0:10:21.07:0,21,821	0/0:19,0:19:45.15:0,45,1635	0/0:14,0:14:21.06:0,21,692	0/0:28,0:28:78.23:0,78,2643	0/0:11,0:9:18.06:0,18,582	0/0:20,0:18:39.09:0,39,1008	0/0:9,0:9:15.05:0,15,561	0/0:12,0:10:21.07:0,21,790
chr10	43492457	.	CA	C	727.93	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.923;DP=344;FS=0.695;HRun=9;HaplotypeScore=56.1285;InbreedingCoeff=0.6714;MQ=71.11;MQ0=5;MQRankSum=-2.271;QD=17.33;ReadPosRankSum=-0.337;VQSLOD=3.4535;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:26:54.10:0,54,279	0/0:5,0:5:12.03:0,12,136	0/0:20,1:14:28.34:0,28,261	0/0:19,0:13:17.42:0,17,161	1/1:6,36:42:92.89:822,93,0	0/0:7,0:7:21.02:0,21,226	0/0:8,0:8:24.07:0,24,277	0/0:9,0:9:27.08:0,27,310	0/0:7,0:6:12.04:0,12,138	0/0:15,0:14:39.10:0,39,438	0/0:18,0:15:33.10:0,33,381	0/0:8,0:8:24.07:0,24,277	0/0:10,0:10:21.06:0,21,242	0/0:10,0:10:27.05:0,27,298	0/0:6,0:5:11.66:0,12,135	0/0:5,0:4:12.02:0,12,125	0/0:16,0:16:42.07:0,42,461	0/0:14,0:14:30.09:0,30,346	0/0:9,1:11:2.61:0,3,273	0/0:3,0:3:9.01:0,9,95	0/0:15,0:15:42.12:0,42,484	0/0:4,0:4:9.03:0,9,104	0/0:11,0:11:33.04:0,33,357	0/0:19,0:19:51.15:0,51,588	0/0:8,0:8:18.05:0,18,208	0/0:8,0:8:24.06:0,24,269	0/0:10,0:10:24.07:0,24,277	0/0:8,0:7:18.05:0,18,208
chr10	43492529	.	T	TA	4514.74	PASS	AB=1.000;AC=35;AF=0.648;AN=54;BaseQRankSum=10.412;DP=369;FS=26.813;HRun=1;HaplotypeScore=108.6694;InbreedingCoeff=0.9104;MQ=70.47;MQ0=8;MQRankSum=-12.560;QD=21.10;ReadPosRankSum=-3.675;VQSLOD=2.7789;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,9:13:18.35:268,18,0	1/1:3,3:6:14.81:157,15,0	0/0:19,0:15:41.94:0,42,470	0/0:21,0:19:45.87:0,46,503	1/1:5,23:28:75.19:946,75,0	1/1:4,12:16:30.61:413,31,0	1/1:1,8:9:18.06:240,18,0	1/1:16,1:14:26.08:200,26,0	1/1:3,4:6:12.50:146,12,0	1/1:1,5:5:15.02:195,15,0	1/1:6,8:9:16.60:203,17,0	0/0:10,0:10:24.08:0,24,311	0/0:18,0:18:54.16:0,54,683	0/0:8,0:8:24.07:0,24,299	1/1:2,11:12:20.73:387,21,0	1/1:5,9:12:24.97:351,25,0	0/0:33,0:33:98.28:0,98,1229	1/1:3,2:5:1.41:42,1,0	1/1:15,0:13:19.51:70,20,0	1/1:4,0:5:11.90:101,12,0	./.	0/0:12,0:12:36.05:0,36,431	0/0:12,0:12:36.08:0,36,445	0/0:22,0:22:63.19:0,63,800	1/1:5,6:10:11.53:228,12,0	1/1:3,6:9:17.56:230,18,0	1/1:17,0:19:45.70:341,46,0	0/1:6,0:4:0.24:0,0,1
chr10	43492530	.	AG	A	4644.36	PASS	AB=0.815;AC=28;AF=0.519;AN=54;BaseQRankSum=9.637;DP=370;FS=50.397;HRun=1;HaplotypeScore=91.3213;InbreedingCoeff=0.5661;MQ=70.24;MQ0=8;MQRankSum=-11.436;QD=22.12;ReadPosRankSum=-4.294;VQSLOD=0.9549;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:14,1:14:24.90:284,25,0	1/1:6,0:6:8.90:87,9,0	0/0:19,0:15:42.12:0,42,592	0/0:21,0:19:46.66:0,47,632	1/1:25,3:28:75.19:946,75,0	1/1:16,0:16:22.81:371,23,0	1/1:9,0:9:18.06:240,18,0	0/1:7,11:15:3.06:416,0,3	1/1:6,1:6:11.87:133,12,0	1/1:6,0:5:14.15:91,14,0	1/1:12,2:9:17.42:207,17,0	0/0:10,0:10:27.09:0,27,428	0/0:18,0:18:54.18:0,54,857	0/0:8,0:8:24.08:0,24,374	1/1:13,0:12:32.84:411,33,0	1/1:13,1:12:25.55:312,26,0	0/0:33,0:33:92.87:0,93,1519	0/1:4,0:4:19.29:19,0,32	0/1:6,9:13:84.95:302,0,85	1/1:1,4:5:12.03:149,12,0	./.	0/0:12,0:12:36.12:0,36,552	0/0:12,0:12:36.12:0,36,556	0/0:21,0:21:63.20:0,63,973	0/1:11,0:10:1.57:213,0,2	0/1:9,0:9:35.05:35,0,95	0/1:9,11:20:30.14:428,0,30	0/0:5,1:4:4.37:0,4,36
chr10	43492557	.	G	GAAA	918.86	PASS	AB=0.972;AC=16;AF=0.296;AN=54;BaseQRankSum=9.115;DP=284;FS=9.640;HRun=2;HaplotypeScore=84.3447;InbreedingCoeff=0.3253;MQ=56.47;MQ0=4;MQRankSum=-5.831;QD=10.44;ReadPosRankSum=-0.590;VQSLOD=-0.7096;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:5,2:7:15.53:16,0,57	0/0:6,0:6:15.01:0,15,195	0/0:12,0:7:17.72:0,18,180	0/0:11,0:8:14.99:0,15,186	1/1:1,0:1:2.90:16,3,0	0/0:8,0:9:25.58:0,26,358	0/0:6,0:6:15.05:0,15,216	0/0:23,0:22:8.84:0,9,168	0/0:6,0:6:18.01:0,18,196	0/1:4,0:3:2.66:18,0,3	1/1:8,2:8:16.23:125,16,0	0/0:11,0:11:27.09:0,27,502	0/0:16,0:16:45.14:0,45,762	0/0:12,0:12:33.11:0,33,605	0/1:7,0:6:11.43:36,0,11	0/0:5,0:6:4.67:0,5,74	0/0:38,0:38:99:0,102,1801	0/1:8,0:8:25.58:26,0,71	0/1:14,0:14:5.79:106,0,6	0/1:2,0:2:4.45:12,0,4	./.	0/0:10,0:10:27.05:0,27,405	0/0:11,0:11:33.11:0,33,597	0/0:18,0:18:54.12:0,54,924	1/1:2,4:5:15.01:188,15,0	1/1:7,3:10:10.10:175,10,0	0/1:14,0:14:6.89:273,0,7	0/1:5,0:4:40.52:97,0,41
chr10	43492695	.	ATGTGCAGC	A	1315.67	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=6.757;DP=446;FS=2.035;HRun=0;HaplotypeScore=112.7981;InbreedingCoeff=0.8760;MQ=74.51;MQ0=0;MQRankSum=-5.624;QD=50.60;ReadPosRankSum=1.423;VQSLOD=3.3398;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:96.33:0,96,4153	1/1:0,6:6:15.05:430,15,0	0/0:20,0:20:57.19:0,57,2217	0/0:25,0:25:69.91:0,70,2907	0/0:38,0:38:81.28:0,81,3527	1/1:0,6:6:9.03:258,9,0	1/1:2,8:10:21.07:601,21,0	0/0:32,0:32:93.32:0,93,3680	1/1:0,4:4:6.02:172,6,0	0/0:9,0:9:24.07:0,24,965	0/0:11,0:11:27.09:0,27,1191	0/0:6,0:6:15.04:0,15,561	0/0:13,0:13:36.12:0,36,1513	0/0:13,0:13:39.13:0,39,1743	0/0:2,0:2:3.01:0,3,123	0/0:6,0:6:18.06:0,18,734	0/0:25,0:25:75.26:0,75,3353	0/0:18,0:18:51.18:0,51,2204	0/0:25,0:24:66.23:0,66,2671	0/0:12,0:12:36.12:0,36,1600	0/0:33,0:33:93.32:0,93,4001	0/0:5,0:5:9.03:0,9,403	0/0:11,0:11:27.09:0,27,1204	0/0:33,0:33:96.33:0,96,3979	0/0:12,0:12:30.10:0,30,1243	0/0:12,0:12:30.10:0,30,1302	0/0:10,0:10:18.06:0,18,802	0/0:13,0:13:39.13:0,39,1691
chr10	43492851	.	C	CT	260.43	PASS	AB=1.000;AC=14;AF=0.350;AN=40;BaseQRankSum=0.958;DP=109;FS=0.000;HRun=2;HaplotypeScore=13.8899;InbreedingCoeff=0.5338;MQ=72.04;MQ0=3;MQRankSum=-2.539;QD=5.92;ReadPosRankSum=-0.198;VQSLOD=0.4009;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,0:7:11.93:102,12,0	1/1:1,0:1:2.96:19,3,0	0/1:17,0:6:1.87:2,0,22	0/0:14,0:5:4.58:0,5,41	./.	0/1:3,0:3:0.13:27,0,0	1/1:5,0:5:14.83:102,15,0	0/0:7,0:7:17.94:0,18,143	1/1:3,0:3:8.95:69,9,0	./.	1/1:4,0:4:2.96:19,3,0	0/0:4,0:4:0.89:0,1,2	0/0:4,0:4:4.64:0,5,37	0/0:1,0:1:3:0,3,27	./.	0/0:5,0:5:10.20:0,10,58	0/0:2,0:2:6:0,6,52	1/1:4,0:4:6.87:57,7,0	0/0:3,0:3:8.99:0,9,76	./.	0/0:6,0:6:11.99:0,12,103	./.	./.	0/0:3,0:3:6:0,6,52	./.	./.	0/0:4,0:4:8.88:0,9,62	0/0:1,0:1:2.98:0,3,22
chr10	43493906	.	G	GA	3481.05	PASS	AB=0.674;AC=32;AF=0.571;AN=56;BaseQRankSum=0.266;DP=558;FS=10.371;HRun=11;HaplotypeScore=77.4947;InbreedingCoeff=0.8323;MQ=60.15;MQ0=7;MQRankSum=-4.807;QD=12.21;ReadPosRankSum=-3.564;VQSLOD=1.6349;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:86.62:0,87,671	1/1:4,0:8:12.87:69,13,0	0/0:14,0:7:13.72:0,14,96	0/0:18,0:10:13.93:0,14,93	1/1:6,26:32:51.10:514,51,0	1/1:7,0:21:22.76:115,23,0	1/1:5,1:12:17.04:86,17,0	1/1:6,19:28:33.48:466,33,0	1/1:6,0:15:15.26:83,15,0	0/0:37,0:37:92.58:0,93,716	0/0:24,1:27:26.36:0,26,371	1/1:12,1:13:19.20:129,19,0	0/1:5,0:10:4.24:47,0,4	1/1:10,0:11:15.06:72,15,0	0/0:22,0:23:58.81:0,59,445	0/0:23,0:23:50.74:0,51,392	0/0:28,0:28:67.76:0,68,516	0/0:28,0:29:79.72:0,80,607	0/1:16,12:28:41.34:337,0,41	1/1:3,22:25:56.91:561,57,0	1/1:2,8:10:21.04:213,21,0	1/1:4,1:9:5.68:28,6,0	1/1:7,2:13:10:74,10,0	1/1:5,2:8:16.45:71,16,0	0/0:19,0:18:41.79:0,42,322	0/0:21,0:21:59.73:0,60,460	1/1:5,16:21:19.03:372,19,0	1/1:7,9:16:24.05:244,24,0
chr10	43494043	.	T	TCC	104.54	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-0.493;DP=551;FS=2.023;HRun=7;HaplotypeScore=71.5361;InbreedingCoeff=0.9672;MQ=87.49;MQ0=0;MQRankSum=-1.172;QD=14.93;ReadPosRankSum=-0.515;VQSLOD=0.5717;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,120,1385	1/1:2,4:7:12.04:190,12,0	0/0:25,0:25:60.10:0,60,657	0/0:20,0:20:42.10:0,42,488	0/0:16,0:16:41.99:0,42,468	0/0:17,0:17:48.14:0,48,558	0/0:24,0:24:69.18:0,69,790	0/0:24,0:24:60.15:0,60,681	0/0:15,0:15:39.11:0,39,454	0/0:19,0:19:54.11:0,54,614	0/0:12,0:12:30.09:0,30,349	0/0:19,0:19:42.11:0,42,489	0/0:14,0:14:36.10:0,36,420	0/0:17,0:17:48.13:0,48,559	0/0:18,0:18:51.14:0,51,584	0/0:22,0:22:60.18:0,60,697	0/0:30,0:30:90.27:0,90,1046	0/0:25,0:25:66.17:0,66,769	0/0:29,0:29:66.18:0,66,769	0/0:16,0:16:45.12:0,45,513	0/0:25,0:25:66.19:0,66,764	0/0:14,0:14:39.12:0,39,454	0/0:14,0:14:39.11:0,39,454	0/0:27,0:27:66.17:0,66,755	0/0:12,0:12:36.11:0,36,419	0/0:15,0:15:42.12:0,42,489	0/0:16,0:16:42.09:0,42,478	0/0:11,0:11:33.10:0,33,385
chr10	43494922	.	AGT	A	1010.88	PASS	AB=0.763;AC=35;AF=0.875;AN=40;BaseQRankSum=1.662;DP=305;FS=12.649;HRun=0;HaplotypeScore=78.7302;InbreedingCoeff=0.3628;MQ=54.16;MQ0=23;MQRankSum=-1.480;QD=5.03;ReadPosRankSum=0.422;VQSLOD=1.6394;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:15:0.89:2,1,0	1/1:6,0:7:2.84:14,3,0	./.	./.	0/0:12,0:12:11.99:0,12,104	1/1:8,0:16:4.40:18,4,0	1/1:9,0:14:14.16:69,14,0	./.	./.	./.	1/1:5,3:6:6.02:65,6,0	1/1:6,3:8:9.02:97,9,0	1/1:9,0:7:7.81:58,8,0	1/1:7,0:5:9.01:90,9,0	./.	1/1:3,0:3:2.84:14,3,0	0/0:17,0:21:21.01:0,21,215	1/1:20,5:24:12.81:186,13,0	1/1:7,0:6:2.99:24,3,0	1/1:9,0:11:0.12:43,0,0	./.	1/1:1,3:3:6.01:61,6,0	1/1:0,2:2:3.01:33,3,0	0/1:20,8:25:5.11:96,0,5	1/1:8,0:8:6.02:65,6,0	1/1:12,1:12:12.02:122,12,0	1/1:8,0:8:14.08:70,14,0	./.
chr10	43494953	.	GTGTGTGTGTGTGTGTTTTA	G	42.24	PASS	AB=1.000;AC=3;AF=0.056;AN=54;BaseQRankSum=2.887;DP=311;FS=5.358;HRun=0;HaplotypeScore=128.5559;InbreedingCoeff=0.2860;MQ=44.92;MQ0=37;MQRankSum=-1.328;QD=1.21;ReadPosRankSum=-0.498;VQSLOD=2.0854;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,18:20:3.01:119,3,0	0/0:1,0:1:2.68:0,3,11	0/0:18,0:3:6.02:0,6,97	0/0:22,0:2:3.01:0,3,53	0/0:13,0:13:33.11:0,33,1207	0/0:16,0:15:20.66:0,21,331	0/1:13,0:12:5.30:5,0,349	0/0:12,0:10:27.09:0,27,534	./.	0/0:6,0:6:15.05:0,15,520	0/0:8,0:7:15.01:0,15,452	0/0:9,0:7:15.05:0,15,702	0/0:8,0:6:15.05:0,15,714	0/0:8,0:5:15.04:0,15,733	0/0:4,0:3:5.97:0,6,88	0/0:4,0:3:9.03:0,9,219	0/0:18,0:17:45.15:0,45,2819	0/0:18,0:17:42.97:0,43,1834	0/0:6,0:4:9.03:0,9,192	0/0:13,0:13:33.11:0,33,1055	0/0:14,0:11:18.06:0,18,518	0/0:5,0:4:9.03:0,9,346	0/0:7,0:7:16.75:0,17,488	0/0:26,0:19:42.14:0,42,1930	0/0:11,0:11:27.09:0,27,1248	0/0:12,0:11:33.11:0,33,1500	0/0:11,0:9:19.62:0,20,695	0/0:6,0:6:15.02:0,15,471
chr10	43494972	.	A	AT	1435.17	PASS	AC=16;AF=0.296;AN=54;BaseQRankSum=-3.582;DP=357;FS=8.811;HRun=9;HaplotypeScore=56.3293;InbreedingCoeff=0.9472;MQ=62.42;MQ0=24;MQRankSum=-3.672;QD=18.17;ReadPosRankSum=0.017;VQSLOD=3.2480;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	0/0:4,0:4:11.99:0,12,102	0/0:37,0:11:11.32:0,11,101	0/0:26,0:7:14.85:0,15,127	0/0:15,0:15:38.36:0,38,318	0/0:12,0:11:23.99:0,24,206	0/0:14,0:14:32.91:0,33,272	1/1:4,7:10:23.55:241,24,0	0/0:3,0:3:9:0,9,78	0/0:6,0:6:14.97:0,15,125	0/0:10,0:10:20.92:0,21,173	0/0:12,0:11:29.88:0,30,246	0/0:9,0:7:15.47:0,15,130	0/0:8,0:7:17.99:0,18,123	1/1:3,3:5:11.24:106,11,0	1/1:0,5:5:15.04:165,15,0	0/0:18,0:17:44.96:0,45,383	0/0:15,0:14:35.82:0,36,307	1/1:4,10:13:30.96:326,31,0	1/1:5,9:14:29.23:291,29,0	1/1:1,8:8:12.03:133,12,0	0/0:8,0:7:14.59:0,15,114	0/0:11,0:11:23.89:0,24,208	0/0:18,0:15:29.95:0,30,253	0/0:14,0:14:38.98:0,39,335	0/0:14,0:13:29.24:0,29,257	1/1:5,8:12:25.06:218,25,0	1/1:1,6:7:15.01:153,15,0
chr10	43495584	.	GAACAAC	G	5644.04	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=8.029;DP=541;FS=13.190;HRun=0;HaplotypeScore=117.9024;InbreedingCoeff=0.9452;MQ=67.31;MQ0=2;MQRankSum=-8.740;QD=34.00;ReadPosRankSum=0.557;VQSLOD=3.8993;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:16:26.48:0,26,165	1/1:0,6:6:17.96:289,18,0	0/0:30,0:21:8.14:0,8,233	0/0:28,0:24:24.08:0,24,621	0/0:21,0:39:60.53:0,61,974	1/1:5,15:20:36.12:750,36,0	1/1:6,14:20:27.09:563,27,0	0/0:15,0:15:27.08:0,27,653	1/1:6,20:26:51.17:1064,51,0	1/1:7,17:24:51.15:976,51,0	1/1:4,11:15:30.10:626,30,0	0/0:21,0:21:57.13:0,57,1632	0/0:20,0:20:48.16:0,48,1543	0/0:34,0:34:78.27:0,78,2446	0/0:4,0:6:5.88:0,6,37	0/0:1,0:9:17.65:0,18,110	0/0:28,0:28:63.22:0,63,1965	1/1:9,7:16:8.78:187,9,0	0/0:10,0:12:18.04:0,18,348	0/0:12,0:13:27.09:0,27,527	0/0:11,0:11:14.97:0,15,269	0/0:25,0:28:56.97:0,57,1501	0/0:25,0:25:49.94:0,50,1319	0/0:21,0:21:57.20:0,57,1854	1/1:7,13:20:27.09:563,27,0	1/1:8,10:18:30.10:626,30,0	0/0:4,0:9:18.06:0,18,411	0/0:8,0:10:9.03:0,9,174
chr10	43496402	.	C	CCCT	2864.20	PASS	AB=0.860;AC=12;AF=0.214;AN=56;BaseQRankSum=-2.400;DP=609;FS=5.751;HRun=0;HaplotypeScore=129.3536;InbreedingCoeff=0.7004;MQ=68.03;MQ0=2;MQRankSum=0.973;QD=20.46;ReadPosRankSum=-2.019;VQSLOD=2.6005;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:34,0:34:22:29,0,22	0/0:11,0:11:27.09:0,27,376	0/0:20,0:16:14.11:0,14,144	0/0:24,0:20:9:0,9,111	1/1:10,0:9:2.85:18,3,0	0/0:18,0:18:39.12:0,39,522	0/0:32,0:32:57.15:0,57,739	0/0:32,0:30:30.06:0,30,392	0/0:25,0:25:36.58:0,37,485	1/1:8,11:20:45.12:773,45,0	1/1:5,13:18:34:613,34,0	0/0:19,0:19:39.12:0,39,532	0/0:29,0:29:66.15:0,66,870	0/0:14,0:14:8.26:0,8,381	0/0:24,0:24:42.13:0,42,576	0/0:16,0:15:33.11:0,33,460	0/0:8,0:24:9.54:0,10,217	0/1:11,7:17:15.40:431,0,15	0/0:17,0:16:9.03:0,9,127	0/0:16,0:16:27.08:0,27,363	0/0:50,0:50:99:0,114,1581	0/0:29,0:29:66.21:0,66,913	0/0:16,0:16:24.08:0,24,338	0/0:24,0:23:24.20:0,24,672	1/1:6,7:13:15.05:278,15,0	1/1:8,18:26:48.04:894,48,0	0/0:17,0:17:45.15:0,45,630	0/0:12,0:12:18.06:0,18,240
chr10	43496416	.	C	CT	1106.15	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.913;DP=609;FS=0.702;HRun=1;HaplotypeScore=110.1415;InbreedingCoeff=0.9038;MQ=57.90;MQ0=13;MQRankSum=-1.060;QD=30.73;ReadPosRankSum=0.467;VQSLOD=3.3617;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,35:35:90.26:1201,90,0	0/0:10,0:10:30.10:0,30,389	0/0:21,0:12:11.57:0,12,335	0/0:15,0:11:21.26:0,21,226	0/0:11,0:10:14.26:0,14,155	0/0:20,0:20:54.16:0,54,682	0/0:27,0:27:75.18:0,75,927	0/0:28,0:20:51.16:0,51,645	0/0:24,0:24:69.19:0,69,840	0/0:19,0:19:36.25:0,36,362	0/0:20,0:20:24.98:0,25,251	0/0:19,0:19:54.17:0,54,689	0/0:25,0:25:75.24:0,75,973	0/0:18,0:18:53.34:0,53,624	0/0:30,0:30:63.14:0,63,770	0/0:12,0:11:33.11:0,33,428	0/0:23,0:23:57.21:0,57,399	0/0:19,0:16:26.91:0,27,311	0/0:21,0:14:39.02:0,39,430	0/0:15,0:15:39.05:0,39,455	0/0:51,0:51:99:0,117,1517	0/0:31,0:31:90.28:0,90,1167	0/0:18,0:18:48.12:0,48,583	0/0:25,0:24:63.16:0,63,798	0/0:12,0:12:10.44:0,10,119	0/0:25,0:24:25.14:0,25,195	0/0:21,0:21:50.84:0,51,635	0/0:12,0:12:27.07:0,27,333
chr10	43496492	.	TTCTTCCTCCTCC	T	2512.73	PASS	AB=0.761;AC=18;AF=0.321;AN=56;BaseQRankSum=8.587;DP=542;FS=8.234;HRun=0;HaplotypeScore=175.3851;InbreedingCoeff=0.7271;MQ=51.29;MQ0=34;MQRankSum=-8.463;QD=11.02;ReadPosRankSum=1.378;VQSLOD=2.1502;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:27:11.84:271,12,0	0/0:9,0:9:21.04:0,21,745	0/1:29,0:4:6.20:6,0,9	0/0:25,0:2:6.02:0,6,120	1/1:5,0:4:2.96:19,3,0	0/0:16,0:15:30.10:0,30,1535	0/0:18,0:17:45.13:0,45,1311	1/1:24,0:19:6.68:144,7,0	0/0:22,0:22:42.14:0,42,1765	0/0:12,0:12:27.08:0,27,822	0/0:7,0:7:21.07:0,21,690	0/0:15,0:15:30.10:0,30,1138	0/0:13,0:13:21.07:0,21,902	0/0:23,0:23:63.21:0,63,2008	1/1:5,19:23:15.05:532,15,0	0/1:2,21:22:77.33:1210,0,77	0/0:28,0:28:72.25:0,72,2792	0/0:17,0:13:33.01:0,33,1125	1/1:24,0:13:6.16:146,6,0	1/1:15,0:15:18.69:164,19,0	1/1:37,0:36:6.01:75,6,0	0/0:20,0:20:45.15:0,45,1940	0/0:20,0:20:54.11:0,54,1424	0/0:31,0:30:78.27:0,78,3066	0/0:15,0:15:36.59:0,37,1534	0/0:19,0:18:45.14:0,45,1374	1/1:20,0:20:13.53:132,14,0	0/0:4,0:3:4.78:0,5,21
chr10	43496498	.	CTCCTCCTCT	C	4739.52	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=7.634;DP=529;FS=18.867;HRun=0;HaplotypeScore=137.2324;InbreedingCoeff=0.8511;MQ=51.28;MQ0=36;MQRankSum=-8.314;QD=24.31;ReadPosRankSum=0.813;VQSLOD=2.8267;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:17,8:25:39.89:1191,40,0	0/0:8,0:8:21.04:0,21,814	0/0:17,0:4:5.67:0,6,20	0/0:28,0:4:12.04:0,12,334	0/0:3,0:2:5.91:0,6,60	0/0:14,0:13:30.10:0,30,1307	0/0:18,0:18:51.14:0,51,1645	1/1:14,10:17:23.97:453,24,0	0/0:21,0:21:42.14:0,42,1647	0/0:11,0:11:27.08:0,27,827	0/0:9,0:8:21.07:0,21,723	0/0:16,0:16:39.13:0,39,1308	0/0:13,0:13:24.08:0,24,1039	0/0:22,0:22:63.20:0,63,2098	1/1:23,0:22:15.05:312,15,0	0/1:23,0:22:99:681,0,104	0/0:29,0:29:75.25:0,75,2879	0/0:17,0:13:30.72:0,31,1136	1/1:15,10:13:30.09:669,30,0	1/1:3,13:14:33.06:638,33,0	1/1:6,30:34:9.03:213,9,0	0/0:20,0:20:51.16:0,51,2056	0/0:19,0:19:54.16:0,54,1648	0/0:31,0:30:84.29:0,84,3259	0/0:17,0:17:44.82:0,45,1625	0/0:19,0:18:48.14:0,48,1385	1/1:1,18:19:16.82:456,17,0	1/1:4,0:3:9.01:126,9,0
chr10	43496905	.	TTTG	T	1522.93	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=4.612;DP=546;FS=13.074;HRun=0;HaplotypeScore=88.9809;InbreedingCoeff=0.4667;MQ=56.44;MQ0=22;MQRankSum=-2.156;QD=8.06;ReadPosRankSum=-3.531;VQSLOD=0.6818;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:25:24.92:25,0,571	0/0:8,0:8:17.93:0,18,260	0/0:64,0:9:0.91:0,1,70	0/0:53,0:10:3.85:0,4,48	0/0:12,0:10:10.12:0,10,141	0/0:17,0:17:13.68:0,14,375	0/0:14,0:14:9.03:0,9,284	0/1:33,0:32:99:103,0,295	0/0:17,0:17:4.49:0,4,472	1/1:13,1:12:20.80:196,21,0	1/1:14,7:21:45.45:382,45,0	0/0:16,0:16:35.79:0,36,453	0/0:8,0:8:16.06:0,16,141	0/0:8,0:8:18.45:0,18,214	0/0:13,0:13:8.62:0,9,34	0/1:9,0:8:1.53:2,0,3	0/0:23,0:22:56.51:0,57,641	1/1:16,4:20:41.90:402,42,0	0/1:27,0:23:11.57:12,0,368	0/0:21,0:20:6.21:0,6,356	0/1:12,0:12:13.51:14,0,59	0/0:10,0:10:23.95:0,24,292	0/0:27,0:27:39.57:0,40,720	0/0:19,0:19:20.93:0,21,510	1/1:4,6:9:12.04:160,12,0	1/1:13,5:17:43.13:404,43,0	0/0:16,0:16:24.55:0,25,251	0/0:11,0:9:6:0,6,67
chr10	43496906	.	TTG	T	1455.94	PASS	AB=0.980;AC=19;AF=0.339;AN=56;BaseQRankSum=6.369;DP=537;FS=23.142;HRun=0;HaplotypeScore=80.5052;InbreedingCoeff=0.3519;MQ=55.59;MQ0=21;MQRankSum=-3.847;QD=4.73;ReadPosRankSum=-2.418;VQSLOD=0.5734;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:19.38:0,19,501	0/0:7,0:7:17.92:0,18,212	0/1:59,0:8:15.03:15,0,49	0/1:50,1:10:10.12:10,0,42	0/0:13,0:11:11.23:0,11,112	0/0:17,0:17:4.17:0,4,284	0/1:14,0:14:5.26:5,0,212	0/1:30,3:32:99:205,0,259	0/0:17,0:17:3.24:0,3,385	1/1:12,1:12:20.99:186,21,0	1/1:20,1:21:46.29:335,46,0	0/0:15,0:15:38.88:0,39,392	0/0:9,0:9:19.59:0,20,152	0/0:8,0:8:3.10:0,3,180	0/1:13,0:13:6.50:24,0,6	1/1:8,0:7:8.01:31,8,0	0/0:23,0:22:35.65:0,36,446	1/1:19,1:20:37.15:310,37,0	0/1:27,1:24:50.65:51,0,287	0/1:20,0:19:39.87:40,0,238	0/0:11,0:11:1.58:0,2,42	0/0:10,0:10:23.79:0,24,219	0/0:27,0:27:36.15:0,36,604	0/0:20,0:20:20.27:0,20,380	1/1:7,1:7:11.99:102,12,0	1/1:17,1:17:42.63:326,43,0	0/0:16,0:16:11.44:0,11,218	0/0:10,1:9:6:0,6,52
chr10	43496923	.	TTG	T	745.29	PASS	AB=0.965;AC=9;AF=0.161;AN=56;BaseQRankSum=9.563;DP=494;FS=5.350;HRun=0;HaplotypeScore=79.8260;InbreedingCoeff=0.0765;MQ=53.59;MQ0=16;MQRankSum=-4.086;QD=6.42;ReadPosRankSum=2.775;VQSLOD=2.3628;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:64.65:0,65,1302	0/0:7,0:7:21.06:0,21,391	0/0:35,0:3:3.86:0,4,24	0/0:46,0:12:5.80:0,6,117	0/1:18,0:15:99:123,0,115	0/0:15,0:15:45.15:0,45,850	0/0:9,0:9:24.08:0,24,395	0/0:18,2:20:34.06:0,34,694	0/0:18,0:18:51.16:0,51,958	0/1:10,3:11:42.86:170,0,43	0/1:18,0:18:55.91:56,0,105	0/0:16,0:16:48.09:0,48,779	0/0:8,0:8:22.85:0,23,389	0/0:9,0:9:27.09:0,27,521	0/1:14,0:14:6.81:101,0,7	0/1:12,0:11:15.57:72,0,16	0/0:24,0:23:62.17:0,62,1000	0/1:16,1:17:67.33:146,0,67	0/0:28,1:21:41.62:0,42,639	0/0:21,1:21:43.38:0,43,970	0/0:8,0:8:15.05:0,15,256	0/0:13,0:13:33.11:0,33,650	0/0:28,0:28:81.19:0,81,1432	0/0:19,0:19:45.09:0,45,727	1/1:7,2:7:15.45:103,15,0	0/1:15,0:15:99:120,0,184	0/0:16,0:16:38.66:0,39,609	0/0:6,0:5:9.03:0,9,171
chr10	43496944	.	GTTTTGGTTTGGT	G	4060.73	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=7.851;DP=495;FS=0.479;HRun=0;HaplotypeScore=147.8107;InbreedingCoeff=0.8720;MQ=52.40;MQ0=17;MQRankSum=-4.168;QD=31.24;ReadPosRankSum=-2.188;VQSLOD=2.9838;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:75.17:0,75,2401	0/0:6,0:6:18.06:0,18,788	0/0:32,0:4:5.46:0,5,29	0/0:36,0:11:11.23:0,11,117	0/1:23,0:21:99:168,0,173	0/0:16,0:16:48.16:0,48,1524	0/0:11,0:11:33.10:0,33,723	0/0:17,0:17:36.11:0,36,603	0/0:19,0:19:57.20:0,57,2198	1/1:14,0:13:33.05:730,33,0	1/1:4,16:21:30.09:449,30,0	0/0:17,0:17:51.17:0,51,1833	0/0:8,0:8:21.07:0,21,901	0/0:10,0:10:30.10:0,30,1183	1/1:7,10:17:24.08:433,24,0	1/1:2,9:11:12.04:314,12,0	0/0:25,0:25:66.11:0,66,1769	1/1:17,0:18:42.05:617,42,0	0/0:25,0:19:42.11:0,42,966	0/0:21,0:19:57.19:0,57,2115	0/0:8,0:8:21.07:0,21,647	0/0:15,0:15:39.13:0,39,1335	0/0:26,0:26:69.22:0,69,2693	0/0:17,0:16:39.13:0,39,1095	1/1:14,0:15:42.14:751,42,0	1/1:1,9:10:24.08:600,24,0	0/0:18,0:18:41.93:0,42,1506	0/0:7,0:7:15.05:0,15,455
chr10	43496950	.	G	GT	845.52	PASS	AB=0.979;AC=13;AF=0.232;AN=56;BaseQRankSum=9.909;DP=517;FS=3.039;HRun=3;HaplotypeScore=71.3984;InbreedingCoeff=0.7369;MQ=51.78;MQ0=19;MQRankSum=-0.448;QD=6.36;ReadPosRankSum=-4.003;VQSLOD=-0.7504;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:84.64:0,85,990	0/0:8,0:8:24.06:0,24,277	0/0:33,0:4:11.65:0,12,96	0/0:32,0:9:13.75:0,14,124	1/1:12,12:22:16.30:507,16,0	0/0:19,0:19:48.13:0,48,563	0/0:11,0:11:30.08:0,30,348	0/0:18,0:18:48.13:0,48,562	0/0:19,0:19:57.17:0,57,684	0/1:12,1:14:5.54:100,0,6	1/1:20,0:20:6.76:18,7,0	0/0:19,0:19:57.15:0,57,661	0/0:8,0:8:24.07:0,24,287	0/0:10,0:10:30.09:0,30,360	1/1:17,0:17:11.38:69,11,0	0/1:11,0:11:5.10:9,0,5	0/0:24,0:24:63.19:0,63,748	1/1:19,0:19:6.76:162,7,0	0/0:27,0:21:54.11:0,54,617	0/0:22,0:20:60.17:0,60,705	0/0:11,0:11:21.05:0,21,241	0/0:19,0:19:45.13:0,45,532	0/0:23,0:23:63.19:0,63,755	0/0:21,0:20:45.14:0,45,538	1/1:16,0:17:24.99:118,25,0	0/1:9,0:9:1.98:33,0,2	0/0:20,0:20:51.12:0,51,581	0/0:7,0:7:15.05:0,15,180
chr10	43498370	.	CG	C	1369.12	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=3.436;DP=562;FS=4.094;HRun=1;HaplotypeScore=62.9283;InbreedingCoeff=0.9714;MQ=78.95;MQ0=0;MQRankSum=-1.743;QD=35.11;ReadPosRankSum=0.745;VQSLOD=3.7471;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:58:99:0,171,2624	0/0:4,0:4:12.04:0,12,192	0/0:10,0:10:27.05:0,27,398	0/0:15,0:15:38.16:0,38,557	1/1:0,19:19:51.17:711,51,0	0/0:15,0:15:45.14:0,45,696	0/0:39,0:39:99:0,117,1773	0/0:14,0:14:42.14:0,42,643	0/0:19,0:19:57.12:0,57,826	0/0:25,0:25:72.09:0,72,1051	0/0:13,0:13:36.12:0,36,575	0/0:26,0:26:75.26:0,75,1194	0/0:22,0:22:66.09:0,66,957	0/0:12,0:12:33.11:0,33,519	1/1:0,15:15:45.15:629,45,0	1/1:0,5:5:12.04:168,12,0	0/0:23,0:23:69.17:0,69,1071	0/0:44,0:44:99:0,123,1949	0/0:16,0:16:45.09:0,45,659	0/0:6,0:6:15.05:0,15,240	0/0:60,0:60:99:0,181,2866	0/0:11,0:11:33.10:0,33,503	0/0:10,0:10:27.04:0,27,381	0/0:23,0:23:69.23:0,69,1084	0/0:16,0:16:48.14:0,48,737	0/0:15,0:15:45.10:0,45,670	0/0:15,0:14:45.15:0,45,711	0/0:12,0:12:36.07:0,36,501
chr10	43499892	.	CA	C	192.33	PASS	AB=0.856;AC=3;AF=0.054;AN=56;BaseQRankSum=4.020;DP=424;FS=1.351;HRun=1;HaplotypeScore=70.9710;InbreedingCoeff=-0.0695;MQ=74.57;MQ0=0;MQRankSum=-4.706;QD=3.37;ReadPosRankSum=1.305;VQSLOD=0.0846;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:99:0,99,1533	0/0:9,0:9:24.08:0,24,384	0/0:13,0:13:38.16:0,38,572	0/0:13,0:13:36.12:0,36,554	0/1:20,2:22:61.37:61,0,150	0/0:18,0:18:54.17:0,54,832	0/0:11,0:11:27.09:0,27,432	0/0:27,0:26:81.28:0,81,1289	0/0:15,0:15:45.05:0,45,659	0/0:14,0:14:42.13:0,42,621	0/1:22,0:22:9.65:10,0,299	0/0:13,0:13:39.12:0,39,600	0/0:10,0:10:30.10:0,30,480	0/0:15,0:15:45.15:0,45,719	0/0:5,0:5:3:0,3,29	0/0:7,0:7:6.02:0,6,77	0/0:25,0:25:75.23:0,75,1159	0/1:6,7:13:99:217,0,206	0/0:19,0:19:57.19:0,57,904	0/0:15,0:15:45.15:0,45,719	0/0:9,0:9:27.09:0,27,432	0/0:8,0:8:24.08:0,24,376	0/0:9,0:9:21.07:0,21,336	0/0:15,0:15:45.11:0,45,691	0/0:10,0:9:6.01:0,6,57	0/0:25,0:25:75.25:0,75,1162	0/0:21,0:21:60.20:0,60,952	0/0:8,0:8:24.08:0,24,384
chr10	43499895	.	A	AGTACTTGCAGGCATTCGGGCAAAACACGT	31397.79	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=2.883;DP=475;FS=9.935;HRun=0;HaplotypeScore=297.8555;InbreedingCoeff=0.9837;MQ=71.85;MQ0=0;MQRankSum=-13.848;QD=176.39;ReadPosRankSum=3.986;VQSLOD=2.9388;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:96.31:0,96,5427	0/0:8,0:8:21.07:0,21,1432	0/0:16,0:16:33.11:0,33,1299	0/0:12,0:12:10.59:0,11,1272	1/1:18,0:33:51.17:4327,51,0	0/0:16,0:16:45.15:0,45,3156	0/0:11,0:11:27.09:0,27,1549	0/0:29,0:28:75.24:0,75,3778	0/0:13,0:13:36.12:0,36,2154	1/1:10,3:19:51.16:5514,51,0	1/1:15,3:29:45.15:3991,45,0	0/0:11,0:11:33.11:0,33,2134	0/0:10,0:10:21.06:0,21,1386	0/0:16,0:16:48.14:0,48,2787	1/1:5,0:15:14.38:1652,14,0	1/1:8,0:14:17.62:1240,18,0	0/0:24,0:24:72.25:0,72,4554	1/1:14,0:14:36.12:3238,36,0	0/0:17,0:17:48.16:0,48,2687	0/0:15,0:15:45.15:0,45,2623	0/0:10,0:10:24.08:0,24,1391	0/0:6,0:6:18.06:0,18,1082	0/0:9,0:9:21.07:0,21,1226	0/0:14,0:14:42.14:0,42,2601	1/1:6,3:20:24.08:2796,24,0	1/1:23,2:33:82.27:8641,82,0	0/0:20,0:20:54.14:0,54,3200	0/0:8,0:8:24.08:0,24,1802
chr10	43499942	.	TA	T	2232.55	PASS	AB=0.857;AC=21;AF=0.375;AN=56;BaseQRankSum=4.213;DP=474;FS=5.470;HRun=13;HaplotypeScore=60.4754;InbreedingCoeff=0.7160;MQ=73.31;MQ0=2;MQRankSum=-1.390;QD=10.43;ReadPosRankSum=0.193;VQSLOD=2.9537;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:69.01:0,69,648	1/1:1,6:7:14.91:110,15,0	0/1:31,0:22:31.72:32,0,66	0/0:23,0:13:7.91:0,8,85	0/0:25,1:27:36.33:0,36,321	1/1:3,15:18:41.75:306,42,0	1/1:1,13:14:26.82:197,27,0	1/1:6,23:29:59.58:437,60,0	1/1:0,13:14:40.82:290,41,0	0/0:18,2:20:1.37:0,1,315	0/0:15,0:15:15.02:0,15,143	0/0:10,0:10:21.03:0,21,203	0/0:9,0:9:27.02:0,27,251	0/0:15,1:16:14.17:0,14,299	0/0:20,0:20:8.14:0,8,236	0/0:11,0:11:14.76:0,15,146	0/0:22,0:22:39.49:0,39,519	0/1:19,1:20:0.16:0,0,381	1/1:6,10:18:33.77:225,34,0	1/1:5,12:17:31.81:225,32,0	0/1:5,8:13:8.32:110,0,8	0/0:3,0:3:6.01:0,6,58	0/0:6,0:6:3:0,3,29	0/0:9,0:9:21.03:0,21,204	0/0:19,0:19:14.97:0,15,133	0/0:19,0:19:36.05:0,36,346	1/1:2,17:19:35.76:263,36,0	1/1:3,11:14:32.79:241,33,0
chr10	43500839	.	TG	T	749.90	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=9.889;DP=396;FS=15.484;HRun=3;HaplotypeScore=77.7403;InbreedingCoeff=0.7765;MQ=85.37;MQ0=3;MQRankSum=-8.115;QD=14.70;ReadPosRankSum=0.251;VQSLOD=1.9801;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:54.14:0,54,733	0/0:8,0:8:20.92:0,21,226	0/0:26,0:22:48.11:0,48,628	0/0:30,0:25:55.47:0,55,822	0/0:6,0:6:3.89:0,4,30	0/0:9,0:9:2.98:0,3,21	0/0:12,0:12:2.98:0,3,21	0/0:30,0:30:87.20:0,87,1068	0/0:10,0:10:5.94:0,6,41	1/1:2,2:4:8.74:93,9,0	1/1:12,6:19:37.70:296,38,0	0/0:12,0:12:36.12:0,36,518	0/0:4,0:4:12.04:0,12,155	0/0:5,0:5:15.04:0,15,199	0/0:5,0:5:3:0,3,26	0/0:8,0:8:13.05:0,13,81	0/0:29,0:28:84.25:0,84,1155	1/1:4,2:6:11.84:98,12,0	0/0:16,0:15:44.87:0,45,537	0/0:15,0:15:36.02:0,36,419	0/0:17,0:17:51.08:0,51,587	0/0:11,0:11:26.99:0,27,343	0/0:18,0:18:51.15:0,51,714	0/0:15,0:15:35.48:0,35,517	1/1:5,1:6:15.25:114,15,0	1/1:7,9:16:34.39:314,34,0	0/0:21,0:21:5.64:0,6,41	0/0:19,0:19:27.05:0,27,335
chr10	43500840	.	G	GTTTTT	2718.90	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=8.638;DP=395;FS=9.988;HRun=1;HaplotypeScore=100.0824;InbreedingCoeff=0.6666;MQ=84.41;MQ0=4;MQRankSum=-9.362;QD=31.99;ReadPosRankSum=1.900;VQSLOD=-0.0924;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:20,0:20:3.69:4,0,1108	0/0:8,0:8:21.04:0,21,299	0/0:26,0:21:51.12:0,51,1092	0/0:30,0:25:71.72:0,72,1419	0/1:6,0:6:7.14:7,0,79	0/0:9,0:9:2.99:0,3,23	0/0:12,0:12:5.94:0,6,41	0/0:30,0:30:90.30:0,90,1662	0/0:10,0:10:5.81:0,6,48	1/1:3,1:4:12:239,12,0	1/1:11,6:19:57.09:1198,57,0	0/0:12,0:12:36.12:0,36,806	0/0:4,0:4:11.99:0,12,221	0/0:5,0:5:15.05:0,15,328	0/0:4,0:4:8.92:0,9,71	0/1:8,0:8:0.09:0,0,143	0/0:28,0:27:84.29:0,84,1874	1/1:5,1:6:13.56:226,14,0	0/0:16,0:15:44.74:0,45,829	0/0:15,0:15:39.07:0,39,589	0/0:17,0:17:51.17:0,51,918	0/0:10,0:10:27.09:0,27,556	0/0:18,0:18:50.73:0,51,1131	0/0:15,0:15:39.12:0,39,849	1/1:5,1:6:18.06:349,18,0	1/1:13,2:16:45.04:865,45,0	0/0:21,0:21:5.25:0,5,52	0/0:19,0:19:30.08:0,30,518
chr10	43500842	.	G	GTTT	6263.90	PASS	AB=1.000;AC=37;AF=0.661;AN=56;BaseQRankSum=3.994;DP=446;FS=11.776;HRun=4;HaplotypeScore=116.0859;InbreedingCoeff=0.8794;MQ=77.79;MQ0=5;MQRankSum=-8.359;QD=22.29;ReadPosRankSum=-4.425;VQSLOD=0.3011;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:18.52:0,19,401	1/1:1,8:9:23.98:324,24,0	0/0:26,0:20:41.23:0,41,430	0/0:33,0:24:56.24:0,56,601	1/1:11,0:11:27.18:268,27,0	1/1:2,9:11:6.02:100,6,0	1/1:1,11:12:6.02:95,6,0	1/1:32,0:31:78.62:962,79,0	1/1:2,10:12:9:154,9,0	1/1:13,0:12:33.03:377,33,0	1/1:23,0:23:61.80:648,62,0	0/0:12,0:12:36.06:0,36,438	0/0:4,0:4:11.03:0,11,87	0/1:6,0:6:4.53:5,0,109	1/1:7,0:7:17.90:174,18,0	1/1:10,0:9:20.93:206,21,0	0/0:26,0:26:75.06:0,75,903	1/1:12,0:12:12.76:260,13,0	1/1:17,1:17:39.06:456,39,0	1/1:0,15:15:35.98:493,36,0	1/1:16,0:16:41.58:554,42,0	0/0:10,0:10:23.49:0,23,217	0/0:20,0:20:45.94:0,46,560	0/0:15,0:15:35.28:0,35,424	1/1:10,0:10:26.26:248,26,0	1/1:23,0:23:55.87:544,56,0	1/1:1,22:23:9.03:191,9,0	1/1:18,0:18:20.91:204,21,0
chr10	43500846	.	TG	T	1196.39	PASS	AB=0.944;AC=16;AF=0.286;AN=56;BaseQRankSum=9.351;DP=436;FS=6.695;HRun=1;HaplotypeScore=91.0678;InbreedingCoeff=0.5614;MQ=70.50;MQ0=12;MQRankSum=-8.870;QD=7.67;ReadPosRankSum=-2.601;VQSLOD=-0.2088;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:45.15:0,45,635	0/0:10,0:9:0.83:0,1,78	0/0:24,0:17:42.13:0,42,569	0/0:34,0:21:56.55:0,57,782	1/1:7,4:11:20.37:169,20,0	0/0:8,0:8:2.78:0,3,13	0/0:13,0:13:5.74:0,6,30	0/1:32,0:30:2.31:2,0,125	0/0:12,0:12:10.35:0,10,43	1/1:15,0:13:11.08:113,11,0	1/1:24,0:24:49.33:331,49,0	0/0:13,0:13:36.12:0,36,525	0/0:6,0:6:14.50:0,15,149	0/0:5,0:5:2.02:0,2,151	0/1:5,2:7:8.78:84,0,9	1/1:3,5:7:7.10:156,7,0	0/0:26,0:26:75.25:0,75,1104	0/1:11,0:11:3.18:68,0,3	0/0:17,0:13:7.55:0,8,94	0/0:15,0:15:34.18:0,34,177	0/0:14,0:14:11.20:0,11,121	0/0:8,0:8:13.91:0,14,276	0/0:20,0:19:43.99:0,44,719	0/0:15,0:15:26.79:0,27,533	1/1:10,0:9:14.34:100,14,0	1/1:22,0:22:38.54:340,39,0	0/0:23,0:23:8.35:0,8,57	0/1:16,0:16:12.64:13,0,46
chr10	43500864	.	T	TG	591.05	PASS	AB=0.968;AC=14;AF=0.250;AN=56;BaseQRankSum=5.649;DP=535;FS=36.963;HRun=0;HaplotypeScore=121.5109;InbreedingCoeff=-0.3101;MQ=49.04;MQ0=33;MQRankSum=-0.364;QD=2.48;ReadPosRankSum=3.993;VQSLOD=1.4726;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:29:15.76:0,16,229	0/1:11,0:10:16.27:67,0,16	0/0:38,0:11:10:0,10,157	0/0:33,0:13:22.10:0,22,204	0/1:13,0:11:11.04:11,0,49	0/0:18,0:18:17.36:0,17,162	0/0:14,0:14:4.36:0,4,90	0/1:33,0:31:87.33:168,0,87	0/1:12,0:12:2.02:2,0,84	0/1:20,0:17:5.74:6,0,97	0/1:23,0:22:50.10:81,0,50	0/0:16,0:13:26.57:0,27,221	0/0:19,0:19:27.56:0,28,157	0/0:8,0:7:20.75:0,21,147	0/0:11,0:10:23.20:0,23,159	0/1:8,0:7:27.75:32,0,28	0/0:35,0:34:78.44:0,78,584	0/1:10,1:11:9.77:10,0,58	0/0:25,0:18:15.95:0,16,250	0/1:16,0:16:35.62:93,0,36	0/1:17,0:17:15.94:149,0,16	0/0:8,0:8:20.15:0,20,120	0/0:23,0:20:49.97:0,50,338	0/0:18,0:17:46.37:0,46,332	0/1:8,0:7:15.40:15,0,26	0/1:23,1:22:63.23:82,0,63	0/1:21,0:21:10.30:10,0,77	0/1:11,10:19:12.84:13,0,49
chr10	43500882	.	T	TC	745.03	PASS	AB=0.933;AC=11;AF=0.196;AN=56;BaseQRankSum=10.506;DP=535;FS=60.503;HRun=0;HaplotypeScore=122.7171;InbreedingCoeff=0.2074;MQ=60.97;MQ0=26;MQRankSum=-6.286;QD=4.81;ReadPosRankSum=4.789;VQSLOD=1.0613;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:23:41.17:0,41,292	0/0:7,0:6:16.54:0,17,96	0/0:48,0:17:19.22:0,19,156	0/1:35,0:12:4.55:5,0,14	0/1:10,1:11:15.41:73,0,15	0/0:19,0:19:41.94:0,42,285	0/0:16,0:16:35.69:0,36,211	0/0:27,0:26:58.65:0,59,367	0/0:11,0:11:26.55:0,27,190	0/1:27,0:25:22.04:262,0,22	0/1:22,0:22:83.62:84,0,89	0/0:17,0:14:26.45:0,26,209	0/0:18,0:18:43.18:0,43,247	0/0:9,0:8:23.83:0,24,188	1/1:11,0:11:9.21:125,9,0	1/1:6,1:6:13.69:92,14,0	0/0:27,0:26:64.05:0,64,480	0/1:9,3:12:23.26:99,0,23	0/0:27,0:23:62.45:0,62,508	0/0:12,0:12:24.06:0,24,170	0/0:17,0:17:43.36:0,43,289	0/0:10,0:10:24.55:0,25,151	0/0:20,0:17:42.59:0,43,265	0/0:16,0:15:39.39:0,39,281	0/1:7,0:6:23.28:28,0,23	0/1:18,1:17:75.32:130,0,75	0/0:24,0:24:51.76:0,52,376	0/0:30,0:28:65.17:0,65,470
chr10	43500915	.	GAGTA	G	4634.07	PASS	AB=0.556;AC=15;AF=0.268;AN=56;BaseQRankSum=11.841;DP=380;FS=22.635;HRun=0;HaplotypeScore=111.7055;InbreedingCoeff=0.8741;MQ=96.62;MQ0=1;MQRankSum=-12.273;QD=50.92;ReadPosRankSum=3.125;VQSLOD=3.7708;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:36.08:0,36,918	0/0:4,0:4:9.03:0,9,252	0/0:16,0:16:42.10:0,42,934	0/0:29,0:29:82.75:0,83,1999	1/1:1,8:9:18.06:306,18,0	0/0:16,0:16:48.16:0,48,1209	0/0:16,0:16:48.16:0,48,1295	0/0:24,0:24:72.25:0,72,2015	0/0:11,0:11:33.11:0,33,847	1/1:4,22:26:78.26:1436,78,0	1/1:1,15:16:45.08:729,45,0	0/0:11,0:11:33.11:0,33,923	0/0:12,0:12:36.12:0,36,948	0/0:2,0:2:6.02:0,6,168	1/1:1,9:10:30.10:554,30,0	0/1:1,4:5:68.91:217,0,69	0/0:13,0:13:39.13:0,39,989	1/1:0,5:5:15.05:290,15,0	0/0:17,0:17:45.15:0,45,1155	0/0:7,0:7:21.07:0,21,587	0/0:17,0:17:42.14:0,42,1147	0/0:12,0:12:36.12:0,36,965	0/0:7,0:7:18.06:0,18,503	0/0:16,0:16:42.14:0,42,1087	1/1:0,6:6:18.06:348,18,0	1/1:1,13:14:39.13:755,39,0	0/0:25,0:25:75.26:0,75,2047	0/0:17,0:17:51.18:0,51,1420
chr10	43500916	.	A	AC	900.33	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=12.931;DP=379;FS=20.174;HRun=0;HaplotypeScore=102.5415;InbreedingCoeff=0.8649;MQ=98.46;MQ0=1;MQRankSum=-12.164;QD=10.00;ReadPosRankSum=3.802;VQSLOD=2.3771;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:33.11:0,33,461	0/0:4,0:4:9.03:0,9,126	0/0:16,0:16:42.07:0,42,519	0/0:31,0:30:79.70:0,80,1020	1/1:8,0:8:10.07:39,10,0	0/0:16,0:16:48.16:0,48,669	0/0:16,0:16:48.16:0,48,670	0/0:24,0:24:72.24:0,72,1007	0/0:11,0:11:33.11:0,33,461	1/1:22,4:26:70.17:413,70,0	1/1:15,1:16:20.33:190,20,0	0/0:11,0:11:33.11:0,33,461	0/0:12,0:12:36.12:0,36,503	0/0:2,0:2:6.02:0,6,84	1/1:9,1:10:26.28:134,26,0	0/1:5,0:5:28.18:28,0,28	0/0:14,0:14:39.13:0,39,542	1/1:5,0:5:13.87:65,14,0	0/0:15,0:15:45.15:0,45,627	0/0:7,0:7:21.07:0,21,294	0/0:17,0:17:42.14:0,42,587	0/0:12,0:12:36.12:0,36,503	0/0:7,0:7:18.06:0,18,252	0/0:16,0:16:41.77:0,42,586	1/1:6,0:6:16.83:81,17,0	1/1:13,1:14:34.34:146,34,0	0/0:25,0:25:75.25:0,75,1048	0/0:17,0:17:51.17:0,51,703
chr10	43501088	.	C	CT	1216.42	PASS	AC=14;AF=0.259;AN=54;BaseQRankSum=9.500;DP=360;FS=1.120;HRun=3;HaplotypeScore=58.3919;InbreedingCoeff=0.8922;MQ=72.30;MQ0=1;MQRankSum=-0.778;QD=13.67;ReadPosRankSum=0.286;VQSLOD=2.4727;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:26.94:0,27,222	0/0:7,0:7:14.76:0,15,118	0/0:25,0:10:4.45:0,4,114	0/0:23,0:13:0.25:0,0,55	1/1:2,0:11:23.74:158,24,0	0/0:12,0:12:23.95:0,24,199	0/0:21,0:21:40.46:0,40,363	0/0:25,0:25:38.98:0,39,341	0/0:12,0:12:23.97:0,24,212	1/1:4,8:12:23.59:175,24,0	1/1:15,1:16:36.34:239,36,0	0/0:13,0:13:17.82:0,18,146	0/0:9,0:9:24:0,24,216	0/0:9,0:9:22.79:0,23,177	1/1:7,0:7:19.01:110,19,0	./.	0/0:24,0:24:56.67:0,57,447	1/1:16,1:17:40.93:295,41,0	0/0:15,0:13:26.01:0,26,209	0/0:8,0:8:15.01:0,15,141	0/0:10,0:10:23.98:0,24,214	0/0:5,0:5:8.99:0,9,74	0/0:9,0:9:8.99:0,9,76	0/0:5,0:5:11.68:0,12,94	1/1:11,1:12:31.58:193,32,0	1/1:12,1:14:32.35:237,32,0	0/0:14,0:14:23.44:0,23,171	0/0:11,0:11:24.01:0,24,223
chr10	43501357	.	GC	G	567.83	PASS	AB=0.833;AC=22;AF=0.393;AN=56;BaseQRankSum=4.381;DP=488;FS=2.332;HRun=10;HaplotypeScore=55.2835;InbreedingCoeff=0.6050;MQ=57.53;MQ0=35;MQRankSum=2.184;QD=4.14;ReadPosRankSum=-0.090;VQSLOD=-0.0805;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:26:37.71:0,38,371	1/1:2,3:5:2.96:25,3,0	0/0:76,0:18:3.06:0,3,112	0/0:73,1:14:7.43:0,7,45	1/1:15,0:14:4.91:39,5,0	1/1:12,1:13:19.99:131,20,0	1/1:13,0:13:13.89:95,14,0	0/0:15,0:14:11.58:0,12,70	1/1:12,0:12:15.80:104,16,0	0/1:3,3:6:11.03:37,0,11	0/1:11,0:9:13.99:24,0,14	0/0:12,0:11:14.98:0,15,131	0/0:5,0:5:8.87:0,9,82	0/0:11,0:11:23.93:0,24,200	1/1:14,0:14:12.81:120,13,0	1/1:6,0:6:4.95:23,5,0	0/0:21,0:20:4.95:0,5,170	1/1:5,12:18:10.39:57,10,0	0/0:19,0:17:11.95:0,12,99	0/0:5,0:5:8.87:0,9,58	0/0:15,0:14:3.37:0,3,21	0/0:4,0:4:5.95:0,6,43	0/0:11,0:10:13.03:0,13,94	0/0:17,0:17:16.53:0,17,296	1/1:8,4:12:2.99:26,3,0	1/1:3,1:11:18.57:76,19,0	0/0:10,0:9:8.86:0,9,64	0/0:26,0:20:4.52:0,5,111
chr10	43501379	.	A	AAC	352.74	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=2.878;DP=499;FS=4.839;HRun=0;HaplotypeScore=65.4019;InbreedingCoeff=0.6841;MQ=67.86;MQ0=24;MQRankSum=2.658;QD=11.38;ReadPosRankSum=2.960;VQSLOD=2.6630;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:70.49:0,70,651	0/0:6,0:6:12.45:0,12,121	0/0:63,0:16:9.97:0,10,181	0/0:71,0:18:19.72:0,20,180	1/1:5,9:16:17.83:206,18,0	0/0:15,0:15:17.61:0,18,236	0/0:15,0:15:28.39:0,28,233	0/0:15,0:15:5.84:0,6,166	0/0:12,0:12:25.11:0,25,196	0/0:8,0:8:20.90:0,21,169	0/0:13,0:13:32.83:0,33,236	0/0:17,0:16:35.66:0,36,283	0/0:8,0:8:22.57:0,23,203	0/0:7,0:7:20.90:0,21,166	1/1:2,0:11:0.84:177,1,0	1/1:1,2:4:8.39:91,8,0	0/0:25,0:24:53.97:0,54,486	0/0:21,0:21:26.44:0,26,201	0/0:16,0:16:26.44:0,26,198	0/0:7,0:7:7.03:0,7,77	0/0:15,0:13:16.75:0,17,127	0/0:4,0:4:8.92:0,9,66	0/0:12,0:10:28.13:0,28,242	0/0:20,0:19:44.31:0,44,396	0/0:12,0:12:8.18:0,8,130	0/0:15,0:14:35.66:0,36,294	0/0:10,0:9:1.47:0,1,35	0/0:28,0:24:33.49:0,33,238
chr10	43501617	.	CAA	C	1058.02	PASS	AB=0.946;AC=14;AF=0.269;AN=52;BaseQRankSum=9.021;DP=379;FS=10.449;HRun=14;HaplotypeScore=82.5657;InbreedingCoeff=0.5569;MQ=41.49;MQ0=23;MQRankSum=-2.185;QD=7.78;ReadPosRankSum=6.530;VQSLOD=0.0954;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:23:13.28:0,13,275	0/1:4,1:4:18.81:19,0,34	./.	./.	0/1:18,1:18:29.72:132,0,30	0/0:12,0:9:6.02:0,6,69	0/0:14,0:14:21:0,21,240	0/0:28,0:25:46.34:0,46,312	0/0:12,0:12:20.92:0,21,202	1/1:7,4:9:20.42:158,20,0	1/1:14,13:24:29.26:224,29,0	0/0:6,0:6:14.99:0,15,170	0/0:12,0:12:23.38:0,23,178	0/0:11,0:10:20.98:0,21,196	0/1:16,0:13:42.90:43,0,128	0/1:6,0:6:17.06:31,0,17	0/0:22,0:21:41.40:0,41,401	1/1:11,3:12:23.40:154,23,0	0/0:13,0:12:27.55:0,28,192	0/0:7,0:6:10.92:0,11,72	0/0:8,0:10:16.91:0,17,84	0/0:7,0:7:9:0,9,79	0/0:16,0:15:26.79:0,27,224	0/0:15,0:13:15.26:0,15,114	1/1:11,6:16:20.54:160,21,0	1/1:13,8:17:40.84:316,41,0	0/0:14,0:13:14.85:0,15,133	0/0:16,0:16:9.57:0,10,113
chr10	43501621	.	A	AT	833.18	PASS	AB=0.804;AC=8;AF=0.154;AN=52;BaseQRankSum=6.067;DP=393;FS=6.270;HRun=0;HaplotypeScore=85.9183;InbreedingCoeff=0.6480;MQ=41.31;MQ0=23;MQRankSum=-1.263;QD=9.16;ReadPosRankSum=4.421;VQSLOD=2.9665;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:74.04:0,74,720	0/0:6,0:5:8.94:0,9,64	./.	./.	0/0:24,0:23:36.06:0,36,218	0/0:9,0:6:5.99:0,6,63	0/0:14,0:14:32.93:0,33,337	0/0:32,0:27:59.89:0,60,403	0/0:13,0:13:20.97:0,21,202	1/1:8,3:10:26.80:177,27,0	0/1:17,7:21:63.33:159,0,63	0/0:8,0:8:17.96:0,18,189	0/0:12,0:12:26.54:0,27,183	0/0:10,0:9:23.75:0,24,191	0/0:15,0:12:32.42:0,32,216	0/0:7,0:7:20.54:0,21,135	0/0:24,0:22:44.79:0,45,423	1/1:9,4:11:31.86:240,32,0	0/0:14,0:13:31.15:0,31,256	0/0:7,0:6:13.93:0,14,99	0/0:10,0:9:15.79:0,16,124	0/0:7,0:7:11.77:0,12,85	0/0:14,0:13:29.52:0,30,240	0/0:16,0:13:18.73:0,19,140	0/1:16,4:20:40.60:132,0,41	1/1:17,6:19:31.03:277,31,0	0/0:14,0:13:26.77:0,27,214	0/0:16,0:16:41.64:0,42,309
chr10	43501624	.	A	AT	773.91	PASS	AB=1.000;AC=15;AF=0.288;AN=52;BaseQRankSum=9.042;DP=402;FS=0.000;HRun=0;HaplotypeScore=91.5538;InbreedingCoeff=0.8071;MQ=41.88;MQ0=22;MQRankSum=-0.075;QD=5.45;ReadPosRankSum=2.584;VQSLOD=3.1902;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:75.43:0,75,780	0/0:6,0:5:8.94:0,9,66	./.	./.	1/1:26,0:25:1.98:72,2,0	0/0:8,0:5:6.01:0,6,66	0/0:13,0:13:29.95:0,30,317	0/0:28,0:23:53.06:0,53,369	0/0:13,0:13:20.99:0,21,207	1/1:9,3:11:17.76:107,18,0	1/1:15,7:20:36.82:240,37,0	0/0:8,0:8:12:0,12,144	0/0:12,0:12:23.50:0,24,153	0/0:11,0:10:14.98:0,15,139	1/1:15,0:12:7.59:27,8,0	0/1:8,0:8:0.42:0,0,29	0/0:25,0:23:44.90:0,45,437	1/1:11,4:13:6.86:113,7,0	0/0:14,0:13:31.25:0,31,250	0/0:8,0:7:11.44:0,11,76	0/0:11,0:10:13.79:0,14,102	0/0:5,0:5:5.90:0,6,42	0/0:12,0:18:28.01:0,28,234	0/0:17,0:14:17.85:0,18,129	1/1:14,4:18:24.68:176,25,0	1/1:20,6:22:18.85:213,19,0	0/0:15,0:13:20.34:0,20,183	0/0:18,0:18:36.76:0,37,257
chr10	43501625	.	A	AT	684.99	PASS	AB=0.871;AC=11;AF=0.212;AN=52;BaseQRankSum=6.020;DP=404;FS=2.653;HRun=0;HaplotypeScore=92.2883;InbreedingCoeff=0.3244;MQ=42.31;MQ0=22;MQRankSum=0.457;QD=4.82;ReadPosRankSum=4.529;VQSLOD=3.2483;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:27:72:0,72,761	0/0:8,0:7:8.94:0,9,66	./.	./.	0/1:13,13:25:20:159,0,20	0/0:8,0:5:6.01:0,6,67	0/0:14,0:14:26.95:0,27,293	0/0:28,0:23:53.06:0,53,368	0/0:13,0:13:20.97:0,21,203	1/1:13,0:12:2.96:102,3,0	0/1:22,0:20:37.87:87,0,38	0/0:8,0:8:20.83:0,21,200	0/0:12,0:12:23.72:0,24,163	0/0:11,0:10:23.82:0,24,195	0/1:12,4:13:54.83:55,0,113	0/1:7,1:8:33.76:75,0,34	0/0:25,0:23:44.90:0,45,439	1/1:13,0:11:20.96:129,21,0	0/0:14,0:13:32.34:0,32,250	0/0:9,0:8:14.60:0,15,104	0/0:12,0:11:16.04:0,16,129	0/0:5,0:5:8.88:0,9,63	0/0:19,0:18:29.72:0,30,248	0/0:17,0:14:16.71:0,17,126	0/1:18,0:18:19.65:78,0,20	1/1:26,0:22:12.16:154,12,0	0/0:15,0:13:21.01:0,21,206	0/0:16,0:16:37.11:0,37,260
chr10	43501628	.	A	AAAAG	1379.79	PASS	AB=1.000;AC=29;AF=0.558;AN=52;BaseQRankSum=-6.681;DP=409;FS=11.839;HRun=0;HaplotypeScore=115.5274;InbreedingCoeff=0.7188;MQ=42.36;MQ0=22;MQRankSum=0.242;QD=6.27;ReadPosRankSum=1.021;VQSLOD=1.8067;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:27:29.38:0,29,235	1/1:3,0:7:3.01:38,3,0	./.	./.	1/1:14,0:26:22.34:171,22,0	1/1:4,4:5:3.01:68,3,0	1/1:12,0:13:9:86,9,0	0/1:28,0:23:0.01:0,0,0	1/1:6,7:13:6.02:134,6,0	0/0:11,0:10:9.01:0,9,82	0/0:25,0:23:6:0,6,54	1/1:8,0:8:11.34:79,11,0	1/1:9,0:13:9.03:153,9,0	1/1:10,0:9:11.54:67,12,0	1/1:12,0:13:26.62:179,27,0	1/1:6,0:7:11.90:87,12,0	1/1:15,11:25:12.03:269,12,0	0/0:14,0:12:3:0,3,28	0/0:15,0:14:5.86:0,6,54	0/0:9,0:8:9:0,9,79	0/0:12,0:11:9.47:0,9,80	1/1:4,0:5:5.93:69,6,0	1/1:16,0:18:6.02:103,6,0	1/1:18,0:15:5.95:62,6,0	0/0:17,0:17:9.01:0,9,81	0/0:26,0:22:24.02:0,24,219	0/0:14,0:13:7.82:0,8,59	0/0:17,0:17:20.98:0,21,181
chr10	43501631	.	AG	A	1439.02	PASS	AB=0.978;AC=25;AF=0.481;AN=52;BaseQRankSum=3.639;DP=387;FS=1.105;HRun=1;HaplotypeScore=86.6028;InbreedingCoeff=0.4717;MQ=42.20;MQ0=22;MQRankSum=-0.442;QD=5.69;ReadPosRankSum=-2.425;VQSLOD=-0.4064;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:23:99:132,0,107	0/1:8,0:7:1.95:2,0,22	./.	./.	0/1:26,0:25:7:7,0,94	0/0:8,0:5:5.96:0,6,48	0/0:13,0:13:26.86:0,27,241	0/1:23,2:20:19.41:151,0,19	0/0:13,0:13:10.74:0,11,86	1/1:11,0:10:17.19:60,17,0	1/1:24,0:23:21.74:86,22,0	0/0:8,0:8:20.96:0,21,176	0/1:11,1:12:13.64:14,0,45	0/0:11,0:10:20.27:0,20,160	0/0:16,0:13:4.18:0,4,210	0/1:5,0:5:12.43:12,0,62	0/0:27,0:25:31.36:0,31,256	1/1:13,0:11:13.60:50,14,0	0/1:15,0:13:0.86:143,0,1	1/1:9,0:8:22.93:176,23,0	1/1:11,0:11:29.68:200,30,0	0/0:3,1:4:5.97:0,6,48	0/0:15,0:14:11.63:0,12,95	0/0:19,0:16:15.63:0,16,110	1/1:17,0:17:14.22:53,14,0	1/1:26,0:22:32.63:124,33,0	1/1:10,3:12:29.90:212,30,0	1/1:9,3:13:26.07:204,26,0
chr10	43502594	.	AATTTT	A	4927.57	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=10.030;DP=499;FS=4.372;HRun=0;HaplotypeScore=103.7328;InbreedingCoeff=0.9912;MQ=74.84;MQ0=4;MQRankSum=-3.384;QD=36.77;ReadPosRankSum=4.611;VQSLOD=4.2150;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:84.94:0,85,2033	0/0:9,0:9:24.07:0,24,590	0/0:30,0:17:44.87:0,45,656	0/0:19,0:13:27.35:0,27,391	1/1:0,0:23:13.40:315,13,0	0/0:18,0:18:54.13:0,54,1422	0/0:23,0:23:69.14:0,69,1609	0/0:29,0:29:81.23:0,81,2064	0/0:11,0:11:33.09:0,33,904	1/1:1,25:29:84.13:1417,84,0	1/1:0,14:15:32.89:628,33,0	0/0:8,0:8:24.07:0,24,604	0/0:11,0:11:30.03:0,30,610	0/0:10,0:10:30.09:0,30,783	1/1:0,1:7:14.94:164,15,0	1/1:0,1:11:24.04:265,24,0	0/0:18,0:18:54.17:0,54,1565	1/1:0,9:10:20.93:429,21,0	0/0:23,0:23:65.77:0,66,1473	0/0:15,0:15:42.07:0,42,1013	0/0:17,0:17:42.03:0,42,685	0/0:19,0:19:57.10:0,57,1142	0/0:20,0:20:60.16:0,60,1459	0/0:18,0:18:51.18:0,51,1523	1/1:1,16:20:35.97:715,36,0	1/1:0,19:19:54.09:995,54,0	0/0:21,0:21:63.14:0,63,1526	0/0:15,0:15:42.12:0,42,1220
chr10	43502595	.	AT	A	444.73	PASS	AB=0.856;AC=24;AF=0.429;AN=56;BaseQRankSum=11.149;DP=505;FS=4.802;HRun=16;HaplotypeScore=86.1583;InbreedingCoeff=0.3671;MQ=73.00;MQ0=4;MQRankSum=-3.243;QD=1.65;ReadPosRankSum=2.739;VQSLOD=-0.5341;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,4:32:21.28:0,21,374	0/1:4,5:9:51.08:51,0,53	0/1:31,0:17:3.99:4,0,49	0/1:15,1:11:3.41:3,0,45	1/1:23,0:22:17.35:54,17,0	0/1:16,2:18:23.66:24,0,181	0/1:18,3:23:15.27:15,0,192	0/0:22,3:28:6.10:0,6,330	0/0:10,0:11:23.80:0,24,186	1/1:29,0:29:35.86:108,36,0	1/1:15,0:15:18.29:56,18,0	0/0:9,1:11:0.20:0,0,82	0/1:8,2:10:1.78:2,0,88	0/1:10,1:11:0.05:0,0,104	1/1:8,0:8:0.12:14,0,0	1/1:11,0:11:16.30:49,16,0	0/0:20,0:20:41.90:0,42,342	1/1:10,0:10:14.26:44,14,0	0/0:22,0:23:10.40:0,10,182	0/0:14,2:16:20.30:0,20,194	0/1:10,6:16:13.47:42,0,13	0/0:17,2:20:2.78:0,3,117	0/0:17,2:20:0.48:0,0,188	0/0:12,1:19:32.25:0,32,327	1/1:20,0:20:24.58:76,25,0	1/1:19,0:19:27.35:82,27,0	0/0:19,0:20:38.73:0,39,302	0/0:13,2:15:17.90:0,18,250
chr10	43503388	.	GA	G	232.54	PASS	AC=14;AF=0.280;AN=50;BaseQRankSum=6.674;DP=209;FS=13.947;HRun=8;HaplotypeScore=46.9898;InbreedingCoeff=0.7360;MQ=52.50;MQ0=4;MQRankSum=-4.782;QD=6.84;ReadPosRankSum=-0.207;VQSLOD=-0.0459;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:17:27.08:0,27,325	0/0:3,0:3:3.01:0,3,36	1/1:8,0:2:0.47:2,0,0	./.	1/1:0,3:3:8.96:69,9,0	0/0:11,0:11:27.07:0,27,309	0/0:7,0:7:14.98:0,15,151	0/0:19,0:17:36.11:0,36,433	0/0:6,0:5:12.02:0,12,127	1/1:0,3:3:8.98:72,9,0	1/1:3,3:4:2.98:23,3,0	0/0:1,0:1:3.01:0,3,35	0/0:3,0:3:9.02:0,9,97	0/0:3,0:3:9.01:0,9,87	./.	./.	0/0:29,0:29:57.73:0,58,698	1/1:0,8:8:14.98:123,15,0	0/0:14,0:12:30.09:0,30,358	0/0:7,0:7:18.05:0,18,210	0/0:6,0:6:18.03:0,18,194	0/0:6,0:6:9.03:0,9,109	0/0:6,0:6:15.03:0,15,166	0/0:9,0:9:18.01:0,18,198	1/1:0,2:1:2.99:23,3,0	1/1:0,4:3:8.99:73,9,0	0/0:7,0:7:18.05:0,18,215	0/0:9,0:9:27.08:0,27,326
chr10	43503397	.	GAACCA	G	1215.24	PASS	AB=1.000;AC=13;AF=0.250;AN=52;BaseQRankSum=5.328;DP=208;FS=8.120;HRun=0;HaplotypeScore=55.2869;InbreedingCoeff=0.7437;MQ=54.14;MQ0=4;MQRankSum=-4.053;QD=29.64;ReadPosRankSum=-0.021;VQSLOD=2.2150;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:15:33.95:0,34,644	0/0:2,0:2:6.02:0,6,137	0/1:9,0:4:9.84:12,0,10	0/0:6,0:2:3.01:0,3,32	1/1:0,3:3:9.03:175,9,0	0/0:14,0:14:27.09:0,27,541	0/0:8,0:8:17.95:0,18,329	0/0:17,0:15:42.12:0,42,571	0/0:6,0:5:15.05:0,15,355	1/1:0,5:4:12.01:201,12,0	1/1:3,3:4:12.04:231,12,0	0/0:2,0:2:6.02:0,6,133	0/0:3,0:3:9.03:0,9,202	0/0:4,0:4:12.04:0,12,279	./.	./.	0/0:25,0:25:57.23:0,57,1353	1/1:1,7:9:21.03:402,21,0	0/0:12,0:11:30.08:0,30,355	0/0:8,0:8:24.05:0,24,275	0/0:6,0:6:18.04:0,18,197	0/0:4,0:4:9.03:0,9,177	0/0:6,0:6:18.06:0,18,419	0/0:6,0:6:9.03:0,9,217	1/1:1,2:2:6.02:119,6,0	1/1:0,5:4:12.04:244,12,0	0/0:8,0:7:14.96:0,15,171	0/0:12,0:12:32.77:0,33,369
chr10	43503401	.	CAA	C	866.42	PASS	AB=1.000;AC=23;AF=0.442;AN=52;BaseQRankSum=0.641;DP=211;FS=1.822;HRun=16;HaplotypeScore=45.5431;InbreedingCoeff=0.6652;MQ=54.19;MQ0=4;MQRankSum=-1.175;QD=8.33;ReadPosRankSum=1.761;VQSLOD=0.2246;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:14:21.06:0,21,248	0/0:0,0:2:6.01:0,6,57	0/1:12,0:5:0.91:1,0,22	0/0:6,0:2:2.90:0,3,16	1/1:3,0:3:6.48:20,6,0	0/0:6,0:17:15.02:0,15,142	0/0:4,0:9:11.97:0,12,112	1/1:9,6:13:14.78:125,15,0	0/0:6,0:5:14.95:0,15,153	0/1:5,0:4:7.39:12,0,7	1/1:7,0:4:10.76:56,11,0	0/0:3,0:3:9.03:0,9,117	0/0:3,0:3:6.02:0,6,78	0/0:4,0:4:9.03:0,9,118	./.	./.	0/0:19,0:25:53.96:0,54,521	1/1:10,0:10:14.64:57,15,0	1/1:4,6:9:17.91:150,18,0	1/1:4,4:8:14.96:125,15,0	1/1:1,6:7:14.96:125,15,0	0/0:4,0:4:3.01:0,3,36	0/0:5,0:6:12.03:0,12,146	0/0:5,0:5:6.02:0,6,79	0/1:4,0:3:5.85:10,0,6	1/1:5,0:4:9.71:35,10,0	1/1:1,4:5:11.73:87,12,0	1/1:2,10:12:29.94:251,30,0
chr10	43503698	.	AC	A	2955.40	PASS	AC=36;AF=1.000;AN=36;DP=109;FS=0.000;HRun=1;HaplotypeScore=76.1574;InbreedingCoeff=0.2014;MQ=46.31;MQ0=2;QD=27.88;VQSLOD=3.2352;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,13:12:36.04:453,36,0	./.	1/1:4,0:2:0.47:1,0,0	./.	./.	./.	1/1:2,0:2:2.04:6,2,0	1/1:0,4:3:9.02:108,9,0	./.	./.	./.	1/1:0,13:13:39.12:527,39,0	1/1:0,6:6:15.05:203,15,0	1/1:0,9:9:27.09:368,27,0	./.	1/1:0,1:1:2.80:13,3,0	1/1:0,7:7:21.07:290,21,0	1/1:6,0:6:3.01:37,3,0	1/1:0,2:2:6.02:84,6,0	1/1:1,1:2:3:26,3,0	1/1:0,11:11:12.03:146,12,0	1/1:0,4:4:12.03:151,12,0	1/1:0,5:5:12.01:123,12,0	1/1:0,6:6:12.04:167,12,0	./.	./.	1/1:0,9:9:25.99:245,26,0	1/1:0,2:2:6.02:82,6,0
chr10	43503789	.	CA	C	1905.05	PASS	AC=22;AF=0.407;AN=54;BaseQRankSum=5.903;DP=343;FS=12.988;HRun=1;HaplotypeScore=93.8744;InbreedingCoeff=0.8605;MQ=84.00;MQ0=0;MQRankSum=-5.840;QD=33.42;ReadPosRankSum=-0.972;VQSLOD=1.8852;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:21:57.19:0,57,910	1/1:0,1:1:3.01:42,3,0	0/0:19,0:18:39.02:0,39,617	0/0:23,0:23:42.52:0,43,843	1/1:0,3:3:6.02:84,6,0	1/1:0,10:10:30.10:414,30,0	1/1:0,3:3:6.02:84,6,0	0/0:14,0:14:42.09:0,42,642	1/1:0,11:11:30.10:414,30,0	1/1:0,6:6:12.04:168,12,0	./.	0/0:17,0:17:39.13:0,39,622	0/0:17,0:17:42.13:0,42,647	0/0:21,0:21:51.15:0,51,767	1/1:0,4:4:12.04:168,12,0	1/1:0,2:2:6.02:84,6,0	0/0:23,0:23:69.24:0,69,1101	1/1:0,3:3:6.02:84,6,0	0/0:9,0:9:24.08:0,24,363	0/0:7,0:7:9.02:0,9,121	0/0:38,0:38:84.29:0,84,1331	0/0:11,0:11:30.10:0,30,479	0/0:9,0:9:18.06:0,18,287	0/0:23,0:23:60.20:0,60,956	1/1:0,1:1:3.01:42,3,0	1/1:0,13:13:39.10:523,39,0	0/0:28,0:28:72.25:0,72,1150	0/0:5,0:5:12.04:0,12,192
chr10	43503805	.	GGA	G	526.45	PASS	AB=1.000;AC=10;AF=0.185;AN=54;BaseQRankSum=4.182;DP=378;FS=1.998;HRun=0;HaplotypeScore=95.2340;InbreedingCoeff=0.6984;MQ=74.14;MQ0=2;MQRankSum=-3.663;QD=10.32;ReadPosRankSum=-0.189;VQSLOD=3.1238;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:79.50:0,79,1329	0/0:1,0:1:2.98:0,3,22	0/0:32,0:17:14.69:0,15,504	0/1:30,0:24:0.51:1,0,572	0/1:3,0:3:0:0,0,0	0/0:12,0:12:26.93:0,27,221	0/0:7,0:7:6.61:0,7,75	0/0:15,0:15:34.91:0,35,221	0/0:10,0:10:20.99:0,21,183	1/1:2,2:4:5.89:85,6,0	./.	0/0:15,0:15:42.14:0,42,711	0/0:18,0:18:54.17:0,54,921	0/0:23,0:23:66.09:0,66,1049	0/0:3,0:5:11.99:0,12,101	0/0:1,0:3:9.01:0,9,100	0/0:27,0:27:81.19:0,81,1341	1/1:0,4:4:12.04:168,12,0	0/0:8,0:6:14.21:0,14,87	0/0:3,0:3:8.63:0,9,46	0/0:41,0:41:92.34:0,92,510	0/0:15,0:15:45.07:0,45,693	0/0:8,0:8:15.05:0,15,245	0/0:28,0:28:75.26:0,75,1314	1/1:0,1:1:3.01:42,3,0	1/1:1,8:9:27.08:367,27,0	0/0:24,0:24:66.13:0,66,354	0/0:4,0:4:11.65:0,12,72
chr10	43503809	.	AG	A	1854.54	PASS	AB=1.000;AC=19;AF=0.380;AN=50;BaseQRankSum=3.970;DP=385;FS=11.338;HRun=9;HaplotypeScore=81.2582;InbreedingCoeff=0.7332;MQ=69.96;MQ0=4;MQRankSum=-1.983;QD=16.71;ReadPosRankSum=2.275;VQSLOD=3.0597;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:78.21:0,78,899	./.	0/0:35,0:17:9.41:0,9,333	0/0:35,0:25:52.28:0,52,514	./.	0/0:8,0:12:11.32:0,11,55	0/0:4,0:9:5.68:0,6,52	1/1:5,10:14:27:247,27,0	0/0:3,0:8:2.76:0,3,33	1/1:3,0:3:1.17:3,1,0	./.	0/0:16,0:16:42.04:0,42,455	0/0:19,0:19:54.11:0,54,598	0/0:24,0:24:63.17:0,63,714	0/0:5,0:5:5.81:0,6,32	0/0:3,0:3:8.80:0,9,52	0/0:27,0:27:75.22:0,75,864	1/1:4,0:4:3.38:8,3,0	1/1:3,5:6:14.94:123,15,0	1/1:0,4:4:12.01:110,12,0	1/1:5,33:38:86.99:788,87,0	0/0:16,0:16:42.10:0,42,472	0/0:6,0:6:15.03:0,15,163	0/0:29,0:29:84.19:0,84,935	1/1:1,0:1:0.47:1,0,0	0/1:10,0:10:7.59:8,0,23	1/1:0,23:23:69.04:631,69,0	1/1:2,3:5:12.01:109,12,0
chr10	43503861	.	GAAGGA	G	1596.97	PASS	AC=20;AF=0.385;AN=52;BaseQRankSum=6.887;DP=400;FS=3.224;HRun=0;HaplotypeScore=100.0567;InbreedingCoeff=0.8470;MQ=58.41;MQ0=3;MQRankSum=-7.338;QD=28.52;ReadPosRankSum=-0.897;VQSLOD=3.3851;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:78.72:0,79,2067	./.	0/0:17,0:12:4.62:0,5,471	0/0:27,0:16:42.04:0,42,892	./.	1/1:3,3:6:17.90:257,18,0	1/1:1,10:11:26.99:505,27,0	0/0:23,0:22:57.13:0,57,1263	1/1:3,0:3:8.96:96,9,0	1/1:2,0:2:6.02:78,6,0	1/1:0,7:7:9.03:162,9,0	0/0:25,0:25:75.20:0,75,2087	0/0:16,0:16:48.15:0,48,1296	0/0:23,0:23:66.23:0,66,1881	1/1:0,7:7:6.02:133,6,0	1/1:1,1:2:6.02:105,6,0	0/0:26,0:26:66.19:0,66,1689	1/1:1,7:8:3:67,3,0	0/0:12,0:9:27.09:0,27,751	0/0:11,0:11:33.11:0,33,840	0/0:39,0:40:99:0,114,2903	0/0:17,0:17:48.14:0,48,1150	0/0:4,0:4:12.04:0,12,279	0/0:42,0:42:99:0,111,2933	1/1:2,0:2:3.01:39,3,0	1/1:2,6:8:20.99:346,21,0	0/0:22,0:21:59.84:0,60,1519	0/0:9,0:9:27.09:0,27,828
chr10	43503865	.	GA	G	506.42	PASS	AC=20;AF=0.385;AN=52;BaseQRankSum=8.147;DP=417;FS=0.720;HRun=2;HaplotypeScore=82.2044;InbreedingCoeff=0.8555;MQ=63.38;MQ0=1;MQRankSum=-6.569;QD=9.04;ReadPosRankSum=0.684;VQSLOD=1.2003;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:96.68:0,97,1276	./.	0/0:21,0:17:16.65:0,17,500	0/0:28,1:19:46.01:0,46,611	./.	1/1:6,0:6:8.68:46,9,0	1/1:10,0:10:20.44:124,20,0	0/0:24,0:23:63.16:0,63,810	1/1:1,3:4:6.02:78,6,0	1/1:0,2:2:6.02:78,6,0	1/1:7,0:7:8.92:93,9,0	0/0:26,0:26:72.24:0,72,1072	0/0:17,0:17:48.14:0,48,660	0/0:22,0:22:66.21:0,66,960	1/1:7,0:7:5.81:31,6,0	1/1:1,2:3:8.89:75,9,0	0/0:24,0:24:66.22:0,66,973	1/1:7,0:7:2.90:16,3,0	0/0:13,0:10:30.10:0,30,443	0/0:12,0:12:36.12:0,36,518	0/0:40,0:40:99:0,111,1532	0/0:16,0:16:38.92:0,39,548	0/0:5,0:5:15.04:0,15,200	0/0:42,0:42:99:0,114,1624	1/1:1,1:2:3.01:39,3,0	1/1:8,0:8:14.72:115,15,0	0/0:23,0:22:47.41:0,47,856	0/0:12,0:12:36.12:0,36,526
chr10	43504250	.	A	AC	577.38	PASS	AB=0.842;AC=4;AF=0.071;AN=56;BaseQRankSum=7.255;DP=591;FS=6.555;HRun=0;HaplotypeScore=102.0228;InbreedingCoeff=-0.0937;MQ=63.53;MQ0=9;MQRankSum=-6.815;QD=6.56;ReadPosRankSum=-3.067;VQSLOD=2.5355;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:46:99:0,135,1784	0/0:5,0:4:6.02:0,6,84	0/0:33,0:19:50.93:0,51,619	0/0:43,0:18:49.76:0,50,611	0/0:9,0:10:14.92:0,15,142	0/0:14,0:23:9.75:0,10,314	0/0:20,1:26:54.24:0,54,581	0/0:21,0:19:54.17:0,54,733	0/1:24,0:25:21.81:22,0,206	0/1:18,7:25:99:371,0,479	0/0:6,0:6:3.01:0,3,37	0/0:21,0:21:60.14:0,60,801	0/0:14,0:14:42.14:0,42,584	0/0:19,0:19:57.18:0,57,777	0/1:13,0:13:25.13:25,0,89	0/0:11,0:11:20.91:0,21,174	0/0:28,0:29:68.89:0,69,1021	0/0:15,1:18:47.06:0,47,495	0/0:12,0:12:8.54:0,9,394	0/0:25,0:25:75.25:0,75,1042	0/0:22,0:22:66.22:0,66,922	0/0:18,0:18:54.17:0,54,739	0/0:11,0:11:33.08:0,33,441	0/0:31,0:33:96.21:0,96,1293	0/0:11,1:12:17.76:0,18,176	0/1:15,7:23:99:268,0,488	0/0:30,0:30:84.23:0,84,1145	0/0:10,0:10:30.10:0,30,420
chr10	43504262	.	G	GAGAGAGAGAC	4081.07	PASS	AB=1.000;AC=22;AF=0.393;AN=56;BaseQRankSum=7.922;DP=603;FS=17.838;HRun=0;HaplotypeScore=178.0638;InbreedingCoeff=0.8483;MQ=58.42;MQ0=13;MQRankSum=-3.060;QD=19.81;ReadPosRankSum=-3.507;VQSLOD=1.2810;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:94.12:0,94,2644	0/1:5,0:4:0:0,0,0	0/0:30,0:13:16.63:0,17,239	0/0:49,0:19:9.93:0,10,252	1/1:10,0:10:2.74:12,3,0	1/1:24,0:24:21.01:324,21,0	0/1:29,0:27:1.25:295,0,1	0/0:24,0:21:60.15:0,60,1138	1/1:4,1:24:18.03:525,18,0	1/1:22,0:21:50:592,50,0	1/1:6,0:5:2.89:25,3,0	0/0:21,0:21:63.15:0,63,1529	0/0:14,0:14:42.12:0,42,1063	0/0:17,0:17:48.11:0,48,1109	1/1:7,11:19:9.03:351,9,0	1/1:1,10:11:18.06:937,18,0	0/0:29,0:29:7.95:0,8,1893	1/1:16,0:16:29.21:407,29,0	0/0:14,0:11:29.15:0,29,465	0/0:28,0:28:72.70:0,73,1936	0/0:24,0:24:69.11:0,69,1307	0/0:17,0:17:48.16:0,48,1247	0/0:11,0:11:33.11:0,33,919	0/0:35,0:35:83.10:0,83,2157	1/1:13,0:13:14.45:108,14,0	1/1:24,0:24:53.76:505,54,0	0/0:27,0:27:69.17:0,69,1782	0/0:11,0:11:30.10:0,30,902
chr10	43504266	.	GAC	G	344.04	PASS	AB=0.971;AC=8;AF=0.143;AN=56;BaseQRankSum=6.871;DP=593;FS=23.924;HRun=0;HaplotypeScore=106.9455;InbreedingCoeff=0.1089;MQ=52.52;MQ0=13;MQRankSum=-0.214;QD=2.84;ReadPosRankSum=-2.822;VQSLOD=0.0148;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,100,1935	0/1:5,0:4:0:0,0,0	0/0:26,0:9:20.27:0,20,241	0/0:43,0:15:16.71:0,17,231	1/1:9,2:11:2.74:12,3,0	0/0:25,0:24:20.97:0,21,172	0/1:27,1:27:70.72:71,0,228	0/0:25,0:22:63.13:0,63,986	0/0:22,0:22:20.87:0,21,212	0/1:22,0:21:99:141,0,473	0/0:5,1:5:2.91:0,3,25	0/0:22,0:22:53.93:0,54,1018	0/0:14,0:14:42.10:0,42,722	0/0:18,0:18:54.10:0,54,807	0/0:18,1:17:8.79:0,9,62	0/0:11,0:11:17.82:0,18,123	0/0:30,0:30:29.83:0,30,1274	0/1:14,2:16:45.32:123,0,45	0/0:17,0:14:41.03:0,41,511	0/0:29,0:29:79.11:0,79,1379	0/0:23,0:23:69.11:0,69,1086	0/0:16,0:16:48.16:0,48,897	0/0:12,0:12:36.11:0,36,640	0/0:34,0:34:73.89:0,74,1542	0/1:15,0:15:24.49:24,0,77	0/1:23,0:23:95.33:95,0,414	0/0:24,0:24:57.05:0,57,1174	0/0:11,0:11:33.09:0,33,572
chr10	43504286	.	C	CAG	159.66	PASS	AB=0.970;AC=8;AF=0.148;AN=54;BaseQRankSum=8.031;DP=529;FS=6.054;HRun=0;HaplotypeScore=103.4049;InbreedingCoeff=0.0827;MQ=58.12;MQ0=9;MQRankSum=-5.812;QD=1.30;ReadPosRankSum=-0.089;VQSLOD=1.6143;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,103,1391	./.	0/0:23,0:13:19.66:0,20,200	0/0:30,0:14:23.96:0,24,242	0/0:9,0:9:3.01:0,3,43	0/1:19,0:18:32.90:33,0,190	0/1:24,0:22:4.56:5,0,391	0/0:28,0:27:78.14:0,78,974	0/1:19,1:20:96.63:97,0,130	0/1:16,1:16:57.04:57,0,420	0/0:7,1:7:9.03:0,9,118	0/0:21,0:21:57.19:0,57,806	0/0:13,0:13:36.12:0,36,508	0/0:16,0:16:45.15:0,45,641	0/1:20,0:19:30.74:31,0,139	1/1:11,0:11:13.75:48,14,0	0/0:29,0:28:54.79:0,55,1114	0/1:11,1:12:23.66:24,0,120	0/0:18,0:15:39.10:0,39,536	0/0:25,0:25:60.17:0,60,856	0/0:17,0:17:45.14:0,45,616	0/0:16,0:16:45.14:0,45,624	0/0:11,0:11:33.10:0,33,452	0/0:25,0:25:69.23:0,69,981	0/0:15,0:15:3.39:0,3,237	0/0:20,0:20:33.81:0,34,667	0/0:23,0:23:69.20:0,69,945	0/0:15,0:15:45.15:0,45,627
chr10	43504487	.	GT	G	1774.99	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-3.140;DP=433;FS=4.231;HRun=11;HaplotypeScore=75.3570;InbreedingCoeff=0.9507;MQ=63.48;MQ0=3;MQRankSum=2.810;QD=18.11;ReadPosRankSum=0.312;VQSLOD=4.6366;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,1:27:50.50:0,51,730	0/0:1,0:8:17.04:0,17,85	0/0:18,1:11:17.21:0,17,134	0/0:22,1:11:6.20:0,6,61	0/0:7,0:15:37.52:0,38,211	0/0:1,0:16:36.93:0,37,185	0/0:4,0:22:54.23:0,54,281	1/1:6,21:27:62.90:517,63,0	0/0:1,0:8:19.89:0,20,100	0/0:8,0:16:35.94:0,36,252	0/0:5,0:13:17.64:0,18,117	0/0:13,1:14:17.41:0,17,361	0/0:9,0:10:29.90:0,30,288	0/0:8,0:8:24.06:0,24,255	0/0:10,0:13:26.29:0,26,166	0/0:2,0:5:8.68:0,9,53	0/0:28,0:28:72.14:0,72,748	0/0:6,0:20:39.66:0,40,201	1/1:5,15:20:44.91:365,45,0	1/1:0,11:11:26.91:216,27,0	1/1:2,24:26:68.92:567,69,0	0/0:7,0:7:18.05:0,18,192	0/0:11,0:11:24.06:0,24,256	0/0:19,1:20:26.50:0,27,487	0/0:2,0:11:20.01:0,20,105	0/0:5,0:20:49.84:0,50,287	1/1:1,8:9:20.97:172,21,0	1/1:0,5:5:14.98:123,15,0
chr10	43504516	.	TG	T	969	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=3.331;DP=447;FS=12.081;HRun=4;HaplotypeScore=68.2274;InbreedingCoeff=0.9683;MQ=62.07;MQ0=8;MQRankSum=-1.935;QD=24.22;ReadPosRankSum=-0.987;VQSLOD=1.8159;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:63.21:0,63,872	0/0:10,0:10:27.08:0,27,358	0/0:18,0:10:18:0,18,220	0/0:19,0:6:9.03:0,9,126	1/1:2,15:16:42.11:480,42,0	0/0:17,0:17:33.11:0,33,461	0/0:18,0:17:48.16:0,48,665	0/0:20,0:19:42.14:0,42,587	0/0:9,0:9:27.09:0,27,377	0/0:10,0:9:24.07:0,24,312	0/0:13,0:12:17.99:0,18,218	0/0:15,0:15:39.13:0,39,545	0/0:12,0:12:36.12:0,36,502	0/0:13,0:13:36.09:0,36,488	1/1:2,12:12:33.06:379,33,0	1/1:0,9:9:21.06:252,21,0	0/0:29,0:29:75.25:0,75,1043	0/0:17,0:14:32.47:0,32,426	0/0:16,0:15:45.11:0,45,607	0/0:14,0:14:36.12:0,36,502	0/0:24,0:24:72.17:0,72,983	0/0:8,0:8:24.08:0,24,335	0/0:12,0:12:36.12:0,36,497	0/0:26,0:23:42.13:0,42,568	0/0:13,0:13:30.10:0,30,419	0/0:23,0:22:63.17:0,63,858	0/0:13,0:13:33.08:0,33,426	0/0:9,0:8:21.07:0,21,294
chr10	43504604	.	GA	G	674.61	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=3.983;DP=431;FS=3.463;HRun=9;HaplotypeScore=45.0858;InbreedingCoeff=0.5858;MQ=57.72;MQ0=9;MQRankSum=2.244;QD=14.35;ReadPosRankSum=1.932;VQSLOD=3.3262;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:40:87.26:0,87,1002	0/0:5,0:5:12.04:0,12,138	0/0:19,0:7:9.34:0,9,105	0/0:13,0:5:10.54:0,11,90	0/0:5,0:9:18.98:0,19,107	0/0:13,1:14:8.64:0,9,353	0/0:16,0:16:9.01:0,9,354	0/0:20,0:17:48.12:0,48,539	0/0:7,0:7:18.05:0,18,208	0/0:17,0:14:36.11:0,36,415	0/0:8,0:8:21.06:0,21,242	0/0:9,0:9:21.06:0,21,242	0/0:6,0:6:18.05:0,18,208	0/0:11,0:11:26.91:0,27,311	0/0:4,0:8:17.26:0,17,95	0/0:3,0:6:11.49:0,11,63	1/1:7,33:39:84.03:769,84,0	0/0:31,0:29:75.20:0,75,852	0/0:16,0:14:42.11:0,42,474	0/0:9,0:9:21.06:0,21,242	0/0:16,0:16:36.11:0,36,415	0/0:12,0:12:33.10:0,33,381	0/0:7,0:9:26.86:0,27,276	0/0:40,0:37:72.18:0,72,802	0/1:7,0:7:2.55:3,0,172	0/0:18,0:16:48.14:0,48,554	0/0:11,0:11:27.08:0,27,312	0/0:10,0:10:30.09:0,30,343
chr10	43504720	.	G	GA	913.38	PASS	AB=1.000;AC=13;AF=0.241;AN=54;BaseQRankSum=2.243;DP=396;FS=27.087;HRun=7;HaplotypeScore=80.2627;InbreedingCoeff=0.7166;MQ=43.55;MQ0=18;MQRankSum=-2.475;QD=11.56;ReadPosRankSum=-3.530;VQSLOD=0.2151;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:32:66:0,66,630	0/0:6,0:5:11.81:0,12,97	./.	0/0:2,0:2:5.84:0,6,35	0/0:12,0:12:5.13:0,5,167	0/0:11,0:9:21.02:0,21,197	0/0:15,0:12:11.71:0,12,114	1/1:10,9:17:33.01:365,33,0	0/1:5,0:4:10.69:11,0,49	0/0:13,0:12:24.04:0,24,231	0/0:14,0:14:18.01:0,18,173	0/0:17,0:17:26.92:0,27,260	0/0:10,0:9:8.97:0,9,86	0/0:13,0:14:7.48:0,7,161	0/0:9,0:8:9:0,9,87	0/0:4,0:4:0.63:0,1,25	0/0:39,0:36:39.43:0,39,475	0/0:25,0:22:13.53:0,14,210	1/1:9,3:7:9.91:110,10,0	1/1:9,7:15:23.86:266,24,0	1/1:6,2:7:3.01:36,3,0	0/0:14,0:14:21.02:0,21,203	0/0:10,0:10:21.03:0,21,202	0/0:35,0:34:71.98:0,72,681	0/0:13,0:11:20.90:0,21,189	0/0:18,0:18:42.05:0,42,400	1/1:5,2:6:11.98:116,12,0	1/1:6,6:10:17.92:182,18,0
chr10	43504732	.	C	CA	1219.14	PASS	AB=0.792;AC=30;AF=0.536;AN=56;BaseQRankSum=2.114;DP=449;FS=12.822;HRun=15;HaplotypeScore=70.0808;InbreedingCoeff=0.2055;MQ=50.42;MQ0=14;MQRankSum=-1.945;QD=4.40;ReadPosRankSum=-3.382;VQSLOD=-0.4986;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:36:16.74:0,17,202	1/1:4,0:6:8.99:43,9,0	0/0:7,0:4:3.74:0,4,20	0/0:8,0:6:7.77:0,8,42	0/1:7,8:15:18.01:82,0,18	1/1:4,0:13:13.39:60,13,0	1/1:8,0:15:5.68:28,6,0	1/1:15,0:20:31.20:170,31,0	0/1:8,0:7:5.97:20,0,6	0/1:11,7:18:4.68:63,0,5	0/1:10,5:18:45.22:82,0,45	0/0:15,0:15:21.32:0,21,112	0/0:10,0:10:13.51:0,14,71	0/1:12,1:14:9.69:10,0,109	1/1:7,1:7:3.47:27,3,0	0/1:2,2:4:8.98:41,0,9	0/0:33,1:33:16.90:0,17,195	0/1:11,12:21:12.23:191,0,12	1/1:12,0:13:15.78:87,16,0	1/1:8,1:12:11.67:79,12,0	1/1:3,0:5:8.61:46,9,0	0/0:15,0:19:4.10:0,4,103	0/1:14,0:14:25.41:25,0,49	0/0:34,0:36:42.52:0,43,227	1/1:5,6:10:10.46:119,10,0	0/1:12,13:25:14.98:194,0,15	1/1:2,0:6:5.68:28,6,0	0/1:16,0:13:7.69:8,0,20
chr10	43504855	.	CTTTTT	C	2562.99	PASS	AB=1.000;AC=35;AF=0.625;AN=56;BaseQRankSum=14.011;DP=357;FS=19.839;HRun=5;HaplotypeScore=147.5216;InbreedingCoeff=0.9166;MQ=86.75;MQ0=1;MQRankSum=-12.719;QD=17.55;ReadPosRankSum=2.777;VQSLOD=-0.4094;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,129,4003	0/1:3,0:3:4.34:34,0,4	0/0:20,0:16:38.28:0,38,983	0/0:29,0:28:75.06:0,75,1587	1/1:15,3:18:40.02:239,40,0	1/1:7,0:7:17.84:125,18,0	1/1:11,0:11:24.02:169,24,0	1/1:3,5:8:23.78:169,24,0	1/1:7,0:6:17.90:130,18,0	1/1:11,2:12:35.80:292,36,0	1/1:5,0:5:14.64:86,15,0	0/0:22,0:22:66.23:0,66,2157	0/0:6,0:6:18.06:0,18,539	0/0:17,0:17:51.10:0,51,1506	1/1:12,0:12:35.25:231,35,0	1/1:4,0:4:11.89:83,12,0	0/0:25,0:25:69.10:0,69,1956	1/1:6,0:6:15.01:143,15,0	1/1:6,0:6:17.97:149,18,0	1/1:7,0:7:20.22:115,20,0	1/1:4,0:4:8.72:63,9,0	0/0:11,0:11:33.11:0,33,1095	0/0:12,0:12:36.11:0,36,981	0/0:25,0:25:75.21:0,75,2205	1/1:8,0:8:23.75:163,24,0	1/1:6,3:9:23.79:192,24,0	1/1:13,0:13:38.75:290,39,0	1/1:5,0:5:14.76:109,15,0
chr10	43504857	.	T	TAAC	8011.05	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=14.653;DP=357;FS=30.457;HRun=0;HaplotypeScore=115.2052;InbreedingCoeff=0.9581;MQ=86.82;MQ0=1;MQRankSum=-13.505;QD=57.22;ReadPosRankSum=4.062;VQSLOD=3.7198;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,132,2418	1/1:0,2:3:9.03:168,9,0	0/0:20,0:16:44.49:0,44,742	0/0:29,0:28:69.08:0,69,1233	1/1:3,15:18:47.37:868,47,0	1/1:0,6:6:18.06:397,18,0	1/1:0,9:9:27.09:580,27,0	1/1:5,3:8:12:225,12,0	1/1:0,7:6:18.06:398,18,0	1/1:2,11:12:33.11:727,33,0	1/1:0,5:5:15.05:328,15,0	0/0:22,0:22:66.23:0,66,1231	0/0:6,0:6:18.06:0,18,336	0/0:18,0:18:54.18:0,54,970	1/1:1,11:12:36.12:804,36,0	1/1:0,4:4:12.04:268,12,0	0/0:28,0:28:75.22:0,75,1303	1/1:1,5:6:15.05:339,15,0	1/1:1,5:6:18.04:368,18,0	1/1:0,7:7:21.07:469,21,0	1/1:2,2:4:9.03:159,9,0	0/0:11,0:11:33.11:0,33,615	0/0:12,0:12:36.12:0,36,671	0/0:24,0:24:72.22:0,72,1281	1/1:0,8:8:24.08:532,24,0	1/1:3,6:9:21.07:473,21,0	1/1:2,9:11:33.09:655,33,0	1/1:0,4:4:12.04:253,12,0
chr10	43504860	.	T	TGAAA	9326.03	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=14.625;DP=359;FS=22.538;HRun=0;HaplotypeScore=117.2639;InbreedingCoeff=0.9469;MQ=86.70;MQ0=1;MQRankSum=-13.545;QD=65.68;ReadPosRankSum=5.364;VQSLOD=4.7312;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,138,2852	1/1:0,3:3:9.03:220,9,0	0/0:20,0:17:35.07:0,35,848	0/0:28,0:27:62.69:0,63,1210	1/1:4,15:19:42.14:1029,42,0	1/1:0,6:6:18.06:474,18,0	1/1:1,9:10:27.09:710,27,0	1/1:5,3:8:9.03:247,9,0	1/1:1,7:7:18.06:481,18,0	1/1:2,11:12:30.10:828,30,0	1/1:1,5:6:18.03:418,18,0	0/0:22,0:22:66.23:0,66,1383	0/0:6,0:6:18.06:0,18,377	0/0:19,0:19:57.20:0,57,1167	1/1:1,11:12:34:893,34,0	1/1:0,4:4:12.04:324,12,0	0/0:27,0:27:75.26:0,75,1568	1/1:1,5:6:15.05:409,15,0	1/1:0,5:5:15.05:414,15,0	1/1:1,7:8:21.07:567,21,0	1/1:2,2:4:6.02:138,6,0	0/0:12,0:12:33.11:0,33,691	0/0:13,0:13:39.10:0,39,727	0/0:23,0:23:66.21:0,66,1331	1/1:0,8:8:24.08:643,24,0	1/1:3,6:9:18.95:493,19,0	1/1:0,9:9:27.09:731,27,0	1/1:0,4:4:12.04:307,12,0
chr10	43505564	.	G	GT	5039.36	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-3.546;DP=545;FS=6.985;HRun=10;HaplotypeScore=55.4981;InbreedingCoeff=0.9532;MQ=71.02;MQ0=0;MQRankSum=-1.042;QD=22.80;ReadPosRankSum=-0.740;VQSLOD=5.4105;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:66.82:0,67,648	1/1:1,6:7:18.05:192,18,0	0/0:13,0:12:19.76:0,20,152	0/0:7,1:8:2.60:0,3,23	1/1:1,16:17:48.10:500,48,0	1/1:4,18:23:38.52:442,39,0	1/1:2,16:18:36.09:384,36,0	0/0:21,1:22:9.87:0,10,282	1/1:1,21:22:29.61:519,30,0	1/1:6,18:25:56.43:569,56,0	1/1:4,10:14:30.07:318,30,0	0/0:24,0:24:68.91:0,69,564	0/0:15,0:15:41.95:0,42,345	0/0:17,0:17:47.94:0,48,394	1/1:2,13:15:33.08:352,33,0	1/1:2,11:14:29.91:302,30,0	0/0:24,0:25:54.25:0,54,527	1/1:4,13:17:8.44:295,8,0	0/0:26,0:26:56.86:0,57,460	0/0:19,1:20:18.07:0,18,360	0/0:17,0:17:37.18:0,37,314	0/0:25,0:25:65.87:0,66,536	0/0:18,1:19:15.94:0,16,337	0/0:22,0:23:61.94:0,62,495	1/1:4,21:25:59.98:621,60,0	1/1:6,18:24:54.06:545,54,0	0/0:26,0:26:68.90:0,69,566	0/0:12,0:12:26.94:0,27,222
chr10	43505895	.	TGA	T	8988.76	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=14.748;DP=623;FS=1.371;HRun=0;HaplotypeScore=91.4076;InbreedingCoeff=0.9995;MQ=85.98;MQ0=0;MQRankSum=-2.485;QD=36.84;ReadPosRankSum=4.324;VQSLOD=7.0413;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,138,2464	1/1:2,8:10:24.08:335,24,0	0/0:28,0:28:75.25:0,75,1284	0/0:13,0:13:33.11:0,33,571	1/1:3,26:29:68.84:966,69,0	1/1:0,15:15:42.14:588,42,0	1/1:0,25:25:69.23:966,69,0	0/0:28,0:28:75.26:0,75,1341	1/1:1,23:24:60.20:840,60,0	1/1:1,31:32:93.31:1302,93,0	1/1:0,26:26:63.21:882,63,0	0/0:19,0:19:51.17:0,51,902	0/0:26,0:26:78.25:0,78,1367	0/0:13,0:13:36.12:0,36,648	1/1:0,21:21:54.18:756,54,0	1/1:0,14:14:39.13:546,39,0	0/0:30,0:30:81.28:0,81,1459	1/1:0,14:14:39.13:546,39,0	0/0:29,0:29:84.26:0,84,1407	0/0:29,0:29:81.28:0,81,1452	0/0:19,0:19:57.19:0,57,996	0/0:23,0:23:66.23:0,66,1188	0/0:17,0:17:45.15:0,45,804	0/0:19,0:19:57.20:0,57,1018	1/1:0,16:16:39.13:546,39,0	1/1:1,17:18:51.17:714,51,0	0/0:26,0:26:75.26:0,75,1350	0/0:10,0:10:27.09:0,27,486
chr10	43506641	.	A	AC	374.89	PASS	AC=6;AF=0.115;AN=52;BaseQRankSum=-0.228;DP=169;FS=0.000;HRun=7;HaplotypeScore=23.7154;InbreedingCoeff=0.6593;MQ=68.56;MQ0=0;MQRankSum=-0.344;QD=17.04;ReadPosRankSum=-0.862;VQSLOD=1.9414;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:24.03:0,24,232	./.	0/0:5,0:5:11.99:0,12,108	0/0:11,0:9:9.05:0,9,159	0/0:5,0:5:12.01:0,12,110	1/1:0,2:2:6.02:69,6,0	1/1:1,9:10:21.06:253,21,0	0/0:9,0:9:12.01:0,12,116	1/1:1,9:10:15.05:181,15,0	0/0:7,0:7:12.02:0,12,116	0/0:5,0:5:5.92:0,6,58	0/0:7,0:7:17.96:0,18,154	0/0:3,0:3:6.01:0,6,58	0/0:2,0:2:3:0,3,29	0/0:5,0:5:9.01:0,9,87	0/0:5,0:5:12.01:0,12,115	0/0:9,0:9:15.02:0,15,144	0/0:9,0:9:27.04:0,27,258	0/0:4,0:4:9.01:0,9,87	./.	0/0:17,0:17:45.04:0,45,420	0/0:7,0:7:18.03:0,18,173	0/0:5,0:5:15.01:0,15,139	0/0:5,0:5:12.02:0,12,116	0/0:8,0:8:15.02:0,15,144	0/0:2,0:2:6.01:0,6,58	0/0:5,0:5:12.01:0,12,115	0/0:2,0:2:6:0,6,52
chr10	43506952	.	A	AT	3932.63	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-9.890;DP=544;FS=1.747;HRun=10;HaplotypeScore=60.4939;InbreedingCoeff=0.9537;MQ=76.23;MQ0=2;MQRankSum=-1.594;QD=25.05;ReadPosRankSum=1.079;VQSLOD=4.0821;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,1:33:36.88:0,37,506	1/1:2,6:8:18.05:192,18,0	0/0:29,0:22:22.15:0,22,155	0/0:18,0:13:10.47:0,10,94	0/0:19,0:19:41.94:0,42,345	1/1:3,16:19:45.11:480,45,0	1/1:4,19:24:35.37:565,35,0	0/0:20,0:23:42.99:0,43,330	1/1:0,16:16:42.11:448,42,0	1/1:4,18:22:57.14:603,57,0	1/1:1,9:10:18.05:191,18,0	0/0:25,0:25:59.88:0,60,485	0/0:18,0:18:44.94:0,45,369	0/0:12,0:13:32:0,32,252	0/0:16,1:17:15.96:0,16,338	0/0:19,0:19:35.93:0,36,296	0/0:32,0:32:83.89:0,84,689	1/1:0,19:19:54.14:576,54,0	0/0:26,2:28:1.98:0,2,424	0/0:6,0:6:17.98:0,18,148	0/0:15,0:16:34.96:0,35,274	0/0:14,0:14:32.94:0,33,267	0/0:8,0:9:20:0,20,154	0/0:25,0:25:65.68:0,66,524	1/1:3,9:12:24.06:256,24,0	1/1:3,24:27:19.98:622,20,0	0/0:24,0:24:53.89:0,54,443	0/0:19,0:19:56.94:0,57,468
chr10	43507291	.	GA	G	1875.11	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=5.932;DP=385;FS=0.507;HRun=7;HaplotypeScore=54.1232;InbreedingCoeff=0.9124;MQ=68.17;MQ0=3;MQRankSum=-8.096;QD=20.61;ReadPosRankSum=4.564;VQSLOD=3.0520;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:57.18:0,57,717	1/1:1,5:6:15.03:153,15,0	0/0:32,2:13:7.85:0,8,154	0/0:43,1:14:16.65:0,17,118	1/1:4,11:15:27.05:275,27,0	1/1:1,6:7:15.03:153,15,0	1/1:2,2:4:6.01:61,6,0	0/0:35,0:35:86.76:0,87,1066	1/1:1,2:3:6.01:61,6,0	1/1:1,6:7:18.02:175,18,0	1/1:0,12:12:33.07:336,33,0	0/0:7,0:6:15.05:0,15,189	0/0:8,0:8:24.08:0,24,302	0/0:10,0:10:21.06:0,21,252	1/1:2,3:5:9.02:92,9,0	1/1:1,2:3:6.01:61,6,0	0/0:25,0:24:66.19:0,66,810	1/1:3,9:12:27.06:275,27,0	0/0:15,0:15:42.12:0,42,516	0/0:17,0:17:48.15:0,48,603	0/0:7,0:7:21.07:0,21,264	0/0:4,0:4:9.03:0,9,113	0/0:6,0:6:14.72:0,15,162	0/0:9,0:8:18.06:0,18,226	1/1:1,9:10:30.04:298,30,0	1/1:2,5:7:15.03:153,15,0	0/0:14,0:13:36.11:0,36,450	0/0:33,0:33:90.29:0,90,1125
chr10	43507308	.	C	CT	554.47	PASS	AC=12;AF=0.375;AN=32;BaseQRankSum=-1.504;DP=314;FS=12.179;HRun=8;HaplotypeScore=54.6975;InbreedingCoeff=0.8398;MQ=67.14;MQ0=12;MQRankSum=0.739;QD=13.52;ReadPosRankSum=-2.240;VQSLOD=1.3963;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:25:41.93:0,42,369	./.	0/0:49,1:12:7.72:0,8,45	0/0:51,0:13:8.83:0,9,60	./.	./.	./.	0/0:33,0:33:81.01:0,81,734	./.	./.	./.	1/1:5,0:4:9.03:103,9,0	1/1:7,0:7:14.91:146,15,0	1/1:1,4:5:2.98:22,3,0	./.	./.	0/0:22,0:21:53.06:0,53,446	./.	0/0:11,0:11:26.85:0,27,233	0/0:19,0:19:50.85:0,51,438	0/0:7,0:7:11.99:0,12,109	1/1:2,3:5:6.82:124,7,0	1/1:6,2:8:7.64:161,8,0	1/1:11,0:8:12.03:137,12,0	./.	./.	0/0:9,0:8:24.81:0,25,207	0/0:38,0:37:90.05:0,90,819
chr10	43507934	.	A	AACACACACACACAC	6612.44	PASS	AB=0.961;AC=34;AF=0.607;AN=56;BaseQRankSum=5.576;DP=580;FS=0.490;HRun=0;HaplotypeScore=220.4795;InbreedingCoeff=0.5454;MQ=66.10;MQ0=13;MQRankSum=-6.578;QD=19.22;ReadPosRankSum=-6.696;VQSLOD=1.3087;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:16,18:40:9.03:312,9,0	1/1:9,0:9:6.02:264,6,0	0/0:39,0:21:2.69:0,3,139	0/0:35,0:19:8.96:0,9,117	1/1:14,0:13:6:53,6,0	1/1:13,0:13:6.02:264,6,0	0/1:35,0:37:53.20:398,0,53	1/1:17,0:16:29.61:323,30,0	1/1:17,0:17:6.02:275,6,0	1/1:19,0:18:42.14:1256,42,0	1/1:10,0:10:9.49:123,9,0	0/0:28,0:30:47.87:0,48,1307	0/0:16,0:17:42.13:0,42,1149	0/0:13,0:14:32.23:0,32,907	0/1:22,0:22:13.74:258,0,14	1/1:12,0:13:8.51:197,9,0	0/0:29,0:31:72.22:0,72,1913	1/1:16,0:14:18.06:662,18,0	0/1:15,0:16:6.76:304,0,7	1/1:8,0:10:1.44:20,1,0	0/1:38,0:38:16.37:119,0,16	0/0:14,0:16:23.86:0,24,576	0/0:12,0:13:23.91:0,24,517	0/0:36,0:41:83.83:0,84,2272	1/1:9,0:9:6.48:142,6,0	1/1:22,0:22:35.55:987,36,0	1/1:8,0:8:7:118,7,0	1/1:9,0:9:15.52:536,16,0
chr10	43507953	.	A	ACACACACACACG	3896.54	PASS	AB=1.000;AC=34;AF=0.607;AN=56;BaseQRankSum=1.493;DP=618;FS=2.651;HRun=0;HaplotypeScore=178.6168;InbreedingCoeff=0.5583;MQ=52.44;MQ0=14;MQRankSum=-2.138;QD=10.02;ReadPosRankSum=-2.442;VQSLOD=2.3079;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:35,0:34:26.81:27,0,82	1/1:0,6:8:6.49:364,6,0	0/0:33,0:14:18.88:0,19,232	0/0:30,0:12:13.97:0,14,157	1/1:14,0:12:5.99:49,6,0	1/1:2,10:16:6.49:364,6,0	1/1:37,0:37:51.63:435,52,0	1/1:15,0:14:30.03:326,30,0	1/1:0,16:23:6.02:360,6,0	0/1:19,0:18:99:145,0,114	1/1:8,0:8:8.49:59,8,0	0/0:27,0:26:59.74:0,60,1182	0/0:20,0:20:56.85:0,57,1142	0/0:16,0:16:40.27:0,40,806	1/1:23,0:23:23.04:175,23,0	1/1:14,0:14:11.98:98,12,0	0/0:34,0:34:95.91:0,96,1589	0/1:22,0:19:38.46:38,0,173	1/1:25,0:25:43.34:362,43,0	1/1:3,5:8:2.03:10,2,0	1/1:23,2:56:18.16:193,18,0	0/0:15,0:16:36.62:0,37,592	0/0:11,0:11:25.45:0,25,359	0/0:41,0:41:99:0,108,2042	1/1:10,0:10:3:25,3,0	0/1:20,0:19:99:112,0,106	1/1:14,0:13:23.38:237,23,0	1/1:4,12:19:2.93:518,3,0
chr10	43507957	.	ACG	A	587.04	PASS	AB=0.960;AC=18;AF=0.321;AN=56;BaseQRankSum=5.705;DP=586;FS=8.032;HRun=0;HaplotypeScore=105.9430;InbreedingCoeff=-0.2864;MQ=51.61;MQ0=11;MQRankSum=-3.539;QD=1.84;ReadPosRankSum=-1.785;VQSLOD=1.1741;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:17.37:0,17,106	0/0:6,0:6:6:0,6,52	0/0:29,0:14:22.03:0,22,229	0/0:30,0:12:13.17:0,13,179	0/1:14,0:12:11.02:11,0,13	0/0:15,0:15:5.56:0,6,51	0/1:32,1:34:99:99,0,226	0/1:13,1:13:99:104,0,154	0/0:20,0:20:5.98:0,6,47	0/1:21,0:20:94.16:94,0,303	1/1:7,0:7:6.37:34,6,0	0/0:26,0:25:44.77:0,45,797	0/0:20,0:20:59.58:0,60,815	0/1:16,1:17:7.29:7,0,553	0/1:23,0:23:22.23:22,0,117	0/0:13,1:14:9.19:0,9,57	0/0:36,0:36:79.71:0,80,1412	0/1:20,1:18:38.09:38,0,263	0/1:25,0:25:6.92:7,0,260	0/1:7,1:8:3.40:49,0,3	0/1:44,3:45:47.99:48,0,156	0/1:15,0:15:15.07:15,0,329	0/1:10,0:10:3.41:3,0,367	0/0:42,0:42:78.04:0,78,1454	0/1:9,1:10:14.99:19,0,15	0/1:20,0:19:99:104,0,122	0/1:12,2:13:73.76:74,0,104	0/1:18,1:19:14.19:14,0,115
chr10	43507973	.	A	ACACG	696.06	PASS	AB=0.964;AC=12;AF=0.214;AN=56;BaseQRankSum=7.505;DP=568;FS=14.558;HRun=0;HaplotypeScore=125.5427;InbreedingCoeff=-0.1275;MQ=54.64;MQ0=6;MQRankSum=-6.680;QD=2.96;ReadPosRankSum=-0.481;VQSLOD=1.5485;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,2:25:10.80:0,11,513	1/1:5,0:5:6.49:108,6,0	0/0:25,0:15:45.10:0,45,721	0/0:26,0:17:45.09:0,45,704	0/0:5,6:11:6:0,6,70	0/1:14,0:14:42.04:100,0,42	0/1:22,8:30:11.76:12,0,462	0/1:19,0:19:93.97:94,0,442	0/1:20,0:20:57.02:95,0,57	0/1:20,0:19:54.02:54,0,599	0/0:5,0:6:3.37:0,3,17	0/0:30,0:29:78.24:0,78,1343	0/0:20,0:20:57.18:0,57,1016	0/0:17,0:17:42.10:0,42,712	0/0:16,6:22:20.86:0,21,272	0/0:9,5:14:14.88:0,15,226	0/0:33,0:33:90.29:0,90,1557	0/0:23,0:20:33.06:0,33,708	0/1:18,0:18:46.48:46,0,354	0/0:6,0:6:2.74:0,3,12	0/1:56,1:55:23.64:24,0,631	0/0:15,0:15:36.11:0,36,629	0/0:5,0:5:9.03:0,9,171	0/0:40,0:40:99:0,102,1797	0/0:12,0:12:12.04:0,12,206	0/1:18,0:18:29.13:29,0,543	0/1:12,0:11:49.53:50,0,174	0/1:19,2:21:99:234,0,119
chr10	43510168	.	AT	A	1874.62	PASS	AB=0.835;AC=38;AF=0.679;AN=56;BaseQRankSum=8.812;DP=507;FS=40.253;HRun=15;HaplotypeScore=83.8864;InbreedingCoeff=0.5148;MQ=75.70;MQ0=1;MQRankSum=-1.002;QD=4.86;ReadPosRankSum=2.340;VQSLOD=-0.3921;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,2:33:35.43:0,35,399	1/1:3,6:9:14.72:96,15,0	0/1:18,0:14:0.95:1,0,78	0/0:15,0:10:3:0,3,26	1/1:5,1:19:23.22:78,23,0	1/1:7,9:17:19.60:121,20,0	1/1:6,7:17:28.51:157,29,0	0/1:20,19:40:45.64:237,0,46	1/1:4,12:16:3.15:146,3,0	1/1:8,2:21:32.09:113,32,0	1/1:7,0:10:6.05:18,6,0	0/1:12,1:13:1.29:1,0,105	0/0:16,0:19:30.28:0,30,245	0/0:21,1:22:8.61:0,9,188	1/1:3,0:14:16.26:47,16,0	1/1:3,1:16:23.28:78,23,0	0/1:23,5:28:23.18:23,0,293	1/1:4,1:11:17.19:60,17,0	1/1:8,9:17:0.11:127,0,0	0/1:6,6:12:0.31:98,0,0	1/1:4,8:12:17.72:115,18,0	0/0:11,0:11:17.88:0,18,142	0/1:16,2:18:8.09:8,0,174	0/0:21,0:20:38.93:0,39,326	1/1:4,0:15:20.31:59,20,0	1/1:8,1:29:38.38:120,38,0	1/1:7,15:23:34.89:218,35,0	1/1:2,8:10:20.67:134,21,0
chr10	43510400	.	C	CAGCT	9665.83	PASS	AB=0.799;AC=24;AF=0.429;AN=56;BaseQRankSum=11.382;DP=462;FS=1.351;HRun=0;HaplotypeScore=109.5557;InbreedingCoeff=0.8711;MQ=48.15;MQ0=27;MQRankSum=-12.456;QD=48.33;ReadPosRankSum=-3.323;VQSLOD=4.8039;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,108,1986	1/1:3,8:11:30.07:737,30,0	0/1:21,0:1:0:0,0,0	0/0:34,0:5:4.25:0,4,33	1/1:4,10:14:33.10:821,33,0	1/1:4,9:13:27.09:711,27,0	1/1:12,15:24:42.14:1115,42,0	0/0:17,0:16:35.92:0,36,665	1/1:9,11:20:54.11:1263,54,0	1/1:6,5:12:24.08:622,24,0	1/1:2,10:12:24.08:633,24,0	0/0:13,0:13:36.12:0,36,672	0/0:12,0:11:30.10:0,30,558	0/0:10,0:10:30.10:0,30,560	1/1:4,10:14:30.10:796,30,0	1/1:2,8:9:24.08:638,24,0	0/0:25,0:25:69.24:0,69,1287	0/1:6,8:13:19.81:752,0,20	0/0:15,0:11:15.05:0,15,264	0/0:13,0:13:36.12:0,36,672	0/0:13,0:12:24.08:0,24,448	0/0:5,0:5:12.04:0,12,224	0/0:9,0:9:27.08:0,27,475	0/0:30,0:30:81.26:0,81,1480	1/1:5,8:13:27.09:697,27,0	1/1:7,8:15:36.11:881,36,0	0/0:18,0:18:51.17:0,51,951	0/0:7,0:5:12.04:0,12,224
chr10	43510408	.	G	GA	1083.58	PASS	AB=0.989;AC=18;AF=0.321;AN=56;BaseQRankSum=9.010;DP=498;FS=4.209;HRun=9;HaplotypeScore=120.7571;InbreedingCoeff=0.7641;MQ=49.81;MQ0=19;MQRankSum=-9.331;QD=5.42;ReadPosRankSum=-3.585;VQSLOD=0.5977;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:98.90:0,99,852	0/0:8,0:8:17.98:0,18,152	0/1:43,0:6:15.99:16,0,16	0/1:65,0:13:12.22:12,0,37	1/1:10,2:12:21.05:218,21,0	0/0:12,0:12:20.73:0,21,152	0/0:21,0:19:33.74:0,34,271	0/0:17,0:17:1.42:0,1,157	0/0:18,0:18:47.76:0,48,386	1/1:7,1:7:15.02:143,15,0	1/1:10,4:14:26.81:214,27,0	0/0:17,0:16:35.91:0,36,302	0/0:12,0:12:23.94:0,24,200	0/0:10,0:10:20.99:0,21,182	1/1:9,3:12:21.24:165,21,0	1/1:10,0:9:3.43:37,3,0	0/0:26,0:25:64.59:0,65,592	1/1:10,3:12:14.86:145,15,0	0/0:12,0:10:20.95:0,21,177	0/0:15,0:15:26.70:0,27,234	0/0:10,0:10:23.98:0,24,205	0/0:7,0:7:11.97:0,12,101	0/0:11,0:11:23.98:0,24,208	0/0:30,0:30:71.93:0,72,620	1/1:7,2:9:15.02:145,15,0	1/1:12,0:12:22.99:187,23,0	0/0:22,0:22:59.94:0,60,512	0/0:8,0:6:15:0,15,130
chr10	43510413	.	AAAAAG	A	2959.71	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=14.128;DP=540;FS=3.832;HRun=0;HaplotypeScore=144.6011;InbreedingCoeff=0.7229;MQ=52.98;MQ0=21;MQRankSum=-10.884;QD=14.03;ReadPosRankSum=-2.587;VQSLOD=2.6820;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,120,3214	0/0:7,0:7:2.01:0,2,26	0/1:60,0:12:44.97:45,0,239	0/0:70,0:18:5.81:0,6,419	1/1:5,7:12:26.94:358,27,0	0/1:13,0:13:28.17:59,0,28	1/1:19,0:18:18.21:140,18,0	0/0:20,0:20:48.59:0,49,955	0/1:19,0:19:26.89:75,0,27	1/1:7,4:9:23.98:282,24,0	1/1:11,3:14:33.87:340,34,0	0/0:19,0:18:51.17:0,51,1407	0/0:10,0:10:27.06:0,27,678	0/0:9,0:9:24.06:0,24,549	1/1:7,8:15:38.91:518,39,0	1/1:5,7:11:27.04:422,27,0	0/0:28,0:27:81.23:0,81,2139	1/1:11,4:14:20.84:295,21,0	0/0:14,0:12:30.06:0,30,749	0/0:16,0:16:45.01:0,45,972	0/0:10,0:10:30.10:0,30,807	0/0:7,0:7:21.07:0,21,537	0/0:13,0:13:33.10:0,33,811	0/0:30,0:30:84.19:0,84,1881	1/1:4,3:7:20.85:255,21,0	1/1:5,8:13:29.13:381,29,0	0/0:22,0:22:63.21:0,63,1778	0/0:8,0:6:15.05:0,15,434
chr10	43510419	.	AAAAAG	A	3804.78	PASS	AB=1.000;AC=26;AF=0.464;AN=56;BaseQRankSum=14.966;DP=585;FS=2.241;HRun=0;HaplotypeScore=153.2299;InbreedingCoeff=0.8567;MQ=64.68;MQ0=16;MQRankSum=-10.012;QD=11.78;ReadPosRankSum=-2.537;VQSLOD=2.8865;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,135,3436	1/1:6,1:7:15:169,15,0	0/1:80,0:22:20.69:21,0,414	0/1:80,0:27:9.88:10,0,633	1/1:12,0:12:27.90:227,28,0	1/1:11,1:12:24.07:305,24,0	1/1:16,5:20:56.91:655,57,0	0/0:19,0:19:45.57:0,46,1026	1/1:14,6:20:51:614,51,0	1/1:12,1:11:29.67:248,30,0	1/1:13,0:13:23.65:134,24,0	0/0:20,0:19:57.16:0,57,1414	0/0:11,0:11:33.09:0,33,719	0/0:9,0:9:21.07:0,21,559	1/1:15,0:15:33.77:415,34,0	1/1:11,0:11:29.39:256,29,0	0/0:33,0:32:93.30:0,93,2370	1/1:13,2:14:26.96:288,27,0	0/0:17,0:17:45.11:0,45,975	0/0:15,0:15:45.07:0,45,1012	0/0:11,0:11:29.74:0,30,865	0/0:8,0:8:24.07:0,24,623	0/0:12,0:12:30.09:0,30,797	0/0:31,0:31:78.20:0,78,1916	1/1:6,1:7:17.94:163,18,0	1/1:12,0:12:22.99:301,23,0	0/0:22,0:22:66.20:0,66,1789	0/0:8,0:7:18.05:0,18,437
chr10	43510420	.	AAAAG	A	4687.84	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=13.730;DP=585;FS=1.775;HRun=0;HaplotypeScore=142.1331;InbreedingCoeff=0.9494;MQ=65.05;MQ0=16;MQRankSum=-12.057;QD=29.67;ReadPosRankSum=-1.123;VQSLOD=4.4685;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,135,2978	1/1:4,3:7:15.01:244,15,0	0/0:83,0:24:48.24:0,48,485	0/0:82,0:28:39.68:0,40,662	1/1:12,0:12:24.47:140,24,0	1/1:7,6:13:27.02:437,27,0	1/1:12,9:20:57.05:832,57,0	0/0:19,0:19:45.57:0,46,878	1/1:9,11:20:51.13:859,51,0	1/1:13,0:11:30.09:434,30,0	1/1:13,0:13:25.53:203,26,0	0/0:20,0:19:57.17:0,57,1229	0/0:11,0:11:33.10:0,33,644	0/0:7,0:7:21.07:0,21,487	1/1:15,0:15:27.72:306,28,0	0/1:11,0:11:1.75:113,0,2	0/0:33,0:32:93.29:0,93,2084	1/1:14,0:13:27.09:434,27,0	0/0:17,0:17:45.10:0,45,903	0/0:16,0:16:48.07:0,48,902	0/0:11,0:11:29.27:0,29,736	0/0:8,0:8:24.08:0,24,545	0/0:11,0:11:30.09:0,30,683	0/0:31,0:31:78.19:0,78,1692	1/1:6,1:7:17.95:240,18,0	1/1:12,0:12:31.87:448,32,0	0/0:22,0:22:66.20:0,66,1533	0/0:8,0:7:18.06:0,18,380
chr10	43510433	.	A	AAG	3521.63	PASS	AB=0.700;AC=23;AF=0.411;AN=56;BaseQRankSum=12.471;DP=624;FS=3.367;HRun=0;HaplotypeScore=131.5901;InbreedingCoeff=0.9091;MQ=69.00;MQ0=16;MQRankSum=-7.936;QD=21.61;ReadPosRankSum=1.023;VQSLOD=4.3543;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,138,1740	1/1:6,0:6:16.95:97,17,0	0/0:92,0:32:10.72:0,11,534	0/0:97,0:36:42.11:0,42,590	1/1:3,0:15:17.13:98,17,0	1/1:7,3:12:26.30:277,26,0	1/1:15,6:20:36.48:468,36,0	0/0:17,0:18:14.80:0,15,405	1/1:21,1:22:46.61:378,47,0	1/1:2,13:14:41.90:611,42,0	1/1:7,2:9:20.89:199,21,0	0/0:21,0:20:57.10:0,57,734	0/0:12,0:12:33.01:0,33,393	0/0:6,0:6:18.06:0,18,256	1/1:3,1:12:13.09:150,13,0	0/1:8,0:14:18.24:112,0,18	0/0:35,0:35:99:0,99,1270	1/1:2,12:13:27.09:454,27,0	0/0:19,0:19:48.06:0,48,577	0/0:16,0:16:37.76:0,38,487	0/0:13,0:13:35.66:0,36,382	0/0:11,0:11:29.99:0,30,383	0/0:13,0:13:35.94:0,36,431	0/0:24,0:24:66.18:0,66,890	1/1:6,2:8:18.04:237,18,0	1/1:2,12:14:33.82:440,34,0	0/0:25,0:25:72.10:0,72,923	0/0:11,0:11:23.27:0,23,257
chr10	43510443	.	G	GA	615.90	PASS	AB=0.919;AC=14;AF=0.250;AN=56;BaseQRankSum=7.366;DP=586;FS=4.583;HRun=0;HaplotypeScore=120.2197;InbreedingCoeff=0.3192;MQ=73.60;MQ0=11;MQRankSum=-5.937;QD=3.85;ReadPosRankSum=-0.591;VQSLOD=2.9111;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,138,1880	0/1:7,1:8:3.97:38,0,4	0/0:71,0:35:67.26:0,67,779	0/0:77,0:37:58.09:0,58,766	0/1:14,0:14:20.46:69,0,20	0/1:13,1:14:11.48:11,0,24	0/1:18,3:19:8.27:8,0,27	0/0:21,0:21:54.13:0,54,705	0/1:18,5:23:36.94:72,0,37	0/1:19,1:19:20.26:50,0,20	0/1:10,0:10:2.69:25,0,3	0/0:18,0:18:54.13:0,54,728	0/0:12,0:12:36.11:0,36,479	0/0:9,0:9:27.06:0,27,342	1/1:12,2:14:33:271,33,0	1/1:14,0:14:20.97:197,21,0	0/0:33,0:33:99:0,99,1324	0/1:13,2:15:2.83:24,0,3	0/0:18,0:18:48.10:0,48,613	0/0:16,0:16:45.15:0,45,624	0/0:11,0:11:33.08:0,33,425	0/0:13,0:13:39.12:0,39,528	0/0:13,0:13:36.12:0,36,502	0/0:20,0:20:60.18:0,60,819	1/1:5,2:7:1.65:15,2,0	0/0:11,0:11:10.22:0,10,30	0/0:27,0:27:81.25:0,81,1097	0/0:8,0:8:24.08:0,24,333
chr10	43510812	.	TAC	T	2426.38	PASS	AB=0.611;AC=23;AF=0.411;AN=56;BaseQRankSum=6.957;DP=440;FS=14.755;HRun=0;HaplotypeScore=66.8612;InbreedingCoeff=0.8869;MQ=52.95;MQ0=12;MQRankSum=2.712;QD=20.22;ReadPosRankSum=3.095;VQSLOD=2.9801;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:20:30.07:0,30,434	1/1:2,6:8:18.02:205,18,0	0/0:49,0:15:30.57:0,31,455	0/0:37,0:14:7.26:0,7,302	1/1:2,9:11:30.08:357,30,0	1/1:4,10:13:24.08:295,24,0	1/1:2,7:9:15.05:185,15,0	0/0:46,0:45:76.09:0,76,1024	1/1:4,8:12:15.05:185,15,0	1/1:6,8:14:33.06:387,33,0	1/1:1,7:9:17.97:187,18,0	0/0:9,0:9:21.07:0,21,342	0/0:5,0:5:12.04:0,12,182	0/0:5,0:5:12.04:0,12,196	1/1:2,8:10:18.06:222,18,0	1/1:2,5:7:12.04:148,12,0	0/0:33,1:33:70.05:0,70,1032	0/1:4,7:10:3.56:166,0,4	0/0:21,1:21:5.17:0,5,538	0/0:16,0:16:27.08:0,27,412	0/0:15,0:15:23.86:0,24,362	0/0:9,0:9:18.06:0,18,294	0/0:9,0:9:27.09:0,27,431	0/0:13,0:13:30.08:0,30,459	1/1:2,6:8:9.02:100,9,0	1/1:1,6:7:18.04:207,18,0	0/0:18,0:18:48.12:0,48,681	0/0:11,1:12:21.07:0,21,329
chr10	43510839	.	AATTATT	A	1598.34	PASS	AC=10;AF=0.217;AN=46;BaseQRankSum=-0.608;DP=278;FS=6.761;HRun=0;HaplotypeScore=78.9673;InbreedingCoeff=0.7364;MQ=56.23;MQ0=0;MQRankSum=-2.913;QD=21.60;ReadPosRankSum=0.556;VQSLOD=2.4682;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:20:30.10:0,30,789	0/0:4,0:6:12.04:0,12,260	0/0:14,0:11:6.02:0,6,86	0/0:12,0:9:1.82:0,2,5	0/0:7,0:8:3.01:0,3,79	0/0:5,0:11:24.04:0,24,592	./.	1/1:20,6:26:30.08:538,30,0	./.	0/0:14,0:15:24.07:0,24,547	0/0:5,0:5:5.98:0,6,75	0/0:7,0:7:3.01:0,3,99	0/0:5,0:5:12.04:0,12,391	0/0:4,0:4:6.02:0,6,198	./.	0/0:2,0:5:9.03:0,9,236	0/0:25,0:25:60.18:0,60,1845	0/0:14,0:12:12.04:0,12,325	1/1:12,6:18:21.06:386,21,0	1/1:5,4:9:12.04:253,12,0	./.	./.	0/0:8,0:8:15.05:0,15,400	0/0:9,0:9:12:0,12,297	0/0:9,0:10:27.09:0,27,609	0/0:5,0:5:6.02:0,6,125	1/1:6,6:12:24.01:385,24,0	1/1:6,3:9:9.03:190,9,0
chr10	43510882	.	GATAA	G	6419.88	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=6.956;DP=261;FS=4.584;HRun=0;HaplotypeScore=60.3897;InbreedingCoeff=0.8198;MQ=67.08;MQ0=1;MQRankSum=-5.056;QD=37.76;ReadPosRankSum=-0.763;VQSLOD=4.3584;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:22:45.15:0,45,1085	1/1:0,3:3:9.03:153,9,0	0/0:12,0:10:15.05:0,15,327	0/0:13,0:9:2.95:0,3,129	1/1:1,6:7:21.07:353,21,0	1/1:2,6:8:18.06:305,18,0	1/1:0,3:3:6.02:102,6,0	1/1:6,23:29:69.17:1036,69,0	1/1:0,5:5:12.04:203,12,0	1/1:0,11:11:33.11:554,33,0	1/1:0,9:9:26.92:390,27,0	0/0:2,0:2:6.02:0,6,150	0/0:3,0:3:3.01:0,3,75	0/0:4,0:4:12.04:0,12,299	1/1:1,4:5:12.04:204,12,0	1/1:1,2:3:6.02:102,6,0	0/0:22,0:22:54.19:0,54,1333	1/1:3,15:17:33.06:560,33,0	1/1:3,7:10:21.07:351,21,0	1/1:1,7:8:21.07:330,21,0	1/1:1,1:2:3.01:51,3,0	0/0:2,0:2:6.02:0,6,139	0/0:6,0:6:18.05:0,18,391	0/0:3,0:3:9.03:0,9,225	1/1:2,14:16:32.85:560,33,0	1/1:0,7:7:21.05:302,21,0	1/1:1,12:13:27.09:458,27,0	1/1:2,11:13:24.08:407,24,0
chr10	43511005	.	ACAACACACAC	A	2460.64	PASS	AB=1.000;AC=12;AF=0.214;AN=56;BaseQRankSum=6.154;DP=501;FS=12.156;HRun=0;HaplotypeScore=142.3028;InbreedingCoeff=0.7186;MQ=51.83;MQ0=23;MQRankSum=1.806;QD=26.75;ReadPosRankSum=0.250;VQSLOD=2.7210;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:27:61.85:0,62,1419	0/0:6,0:6:18.06:0,18,351	0/0:52,0:22:62.91:0,63,912	0/0:55,0:26:63.22:0,63,1032	0/0:6,0:5:6.02:0,6,170	0/0:18,0:18:42.14:0,42,955	0/0:17,0:17:35.07:0,35,1267	0/0:22,0:19:55.07:0,55,1008	0/0:16,0:15:42.12:0,42,1307	1/1:2,16:16:42.11:624,42,0	1/1:1,14:16:20.77:171,21,0	0/0:13,0:13:24.08:0,24,541	0/0:13,0:12:24.08:0,24,807	0/0:10,0:9:21.07:0,21,410	0/1:7,0:7:82.46:82,0,124	0/1:6,0:6:68.34:68,0,160	0/0:35,0:34:86.43:0,86,3015	1/1:10,2:13:36.10:691,36,0	0/0:9,0:7:17.80:0,18,435	0/0:11,0:11:21.05:0,21,641	0/0:41,0:38:54.18:0,54,1225	0/0:6,0:6:18.06:0,18,417	0/0:15,0:15:39.13:0,39,843	0/0:24,0:24:51.16:0,51,1331	1/1:0,12:13:9.03:293,9,0	1/1:1,18:19:51.60:709,52,0	0/0:9,0:9:21.07:0,21,567	0/0:1,0:1:3:0,3,25
chr10	43511007	.	AAC	A	494.52	PASS	AB=0.861;AC=20;AF=0.385;AN=52;BaseQRankSum=0.919;DP=502;FS=0.989;HRun=0;HaplotypeScore=93.6085;InbreedingCoeff=0.5544;MQ=51.11;MQ0=23;MQRankSum=0.074;QD=2.93;ReadPosRankSum=0.263;VQSLOD=2.0000;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:27,1:28:17.44:156,17,0	1/1:6,0:6:3.01:32,3,0	./.	./.	0/0:6,0:6:5.99:0,6,49	0/0:13,0:18:9.01:0,9,100	0/0:11,0:19:20.87:0,21,257	0/0:22,0:19:11.84:0,12,68	0/0:11,0:13:16.84:0,17,171	1/1:18,0:16:2.35:13,2,0	0/1:16,0:16:0:0,0,0	1/1:7,5:12:6.01:64,6,0	0/1:8,5:12:32.96:85,0,33	1/1:6,3:9:5.85:47,6,0	0/0:6,0:7:3:0,3,25	0/0:4,0:6:5.99:0,6,47	0/0:33,2:34:15.06:0,15,570	1/1:12,0:12:8.52:42,9,0	0/0:10,0:9:5.56:0,6,29	0/0:10,0:10:8.99:0,9,75	0/0:35,0:39:8.97:0,9,73	0/0:8,1:9:0:0,0,0	1/1:13,2:15:8.69:79,9,0	1/1:20,4:24:8.72:98,9,0	1/1:13,0:13:8.52:42,9,0	0/0:19,0:19:2.78:0,3,7	0/0:8,0:10:2.96:0,3,21	0/0:1,0:1:3.01:0,3,37
chr10	43511253	.	AT	A	6831.55	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=9.325;DP=542;FS=0.344;HRun=3;HaplotypeScore=61.4164;InbreedingCoeff=0.9958;MQ=85.21;MQ0=0;MQRankSum=-1.236;QD=29.19;ReadPosRankSum=3.022;VQSLOD=4.2086;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:93.19:0,93,1214	1/1:0,9:9:21.07:259,21,0	0/0:31,0:25:52.75:0,53,526	0/0:39,0:28:38.49:0,38,355	1/1:3,26:28:74.84:801,75,0	1/1:0,17:17:45.14:554,45,0	1/1:1,24:25:60.16:726,60,0	0/0:18,0:18:42.11:0,42,528	1/1:1,20:21:48.11:564,48,0	1/1:2,20:22:63.05:682,63,0	1/1:0,24:24:66.04:774,66,0	0/0:16,0:16:45.13:0,45,609	0/0:7,0:7:21.07:0,21,301	0/0:13,0:13:39.10:0,39,509	1/1:0,11:11:18.06:222,18,0	1/1:1,20:21:54.10:635,54,0	0/0:24,0:24:65.02:0,65,906	1/1:2,18:20:45.11:540,45,0	0/0:18,0:18:49.46:0,49,636	0/0:8,0:8:21.01:0,21,258	0/0:12,0:12:33.08:0,33,437	0/0:18,0:18:48.15:0,48,670	0/0:15,0:15:42.12:0,42,566	0/0:21,0:21:51.15:0,51,697	1/1:2,10:12:27.08:333,27,0	1/1:2,21:23:63.15:740,63,0	0/0:28,0:28:81.16:0,81,1063	0/0:6,0:6:18.02:0,18,207
chr10	43511255	.	TTA	T	915.03	PASS	AB=0.986;AC=21;AF=0.375;AN=56;BaseQRankSum=14.252;DP=543;FS=0.339;HRun=0;HaplotypeScore=91.8632;InbreedingCoeff=0.7511;MQ=83.91;MQ0=0;MQRankSum=0.478;QD=3.86;ReadPosRankSum=4.887;VQSLOD=1.9611;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:96.20:0,96,1683	1/1:9,0:9:10.88:27,11,0	0/0:33,0:25:61.31:0,61,760	0/0:40,0:27:25.06:0,25,489	1/1:26,2:27:28.84:213,29,0	0/1:18,0:18:6.98:31,0,7	1/1:25,1:26:12.31:117,12,0	0/0:20,0:20:51.14:0,51,785	0/1:21,1:22:5.58:72,0,6	1/1:21,2:23:21.91:232,22,0	1/1:24,0:24:22.43:94,22,0	0/0:16,0:16:48.14:0,48,870	0/0:7,0:7:21.07:0,21,424	0/0:13,0:13:39.11:0,39,698	0/1:12,0:12:10.95:11,0,12	1/1:21,1:22:7.51:104,8,0	0/0:25,0:25:72.12:0,72,1308	1/1:19,2:21:24.45:102,24,0	0/0:17,0:17:51.03:0,51,878	0/0:7,0:7:21.07:0,21,377	0/0:13,0:13:36.09:0,36,626	0/0:16,0:16:48.15:0,48,931	0/0:16,0:16:48.12:0,48,827	0/0:17,0:17:51.16:0,51,974	1/1:10,0:10:13.38:34,13,0	1/1:22,0:22:2.16:82,2,0	0/0:27,0:27:81.17:0,81,1447	0/0:6,0:6:18.03:0,18,272
chr10	43511479	.	G	GA	1276.66	PASS	AB=0.760;AC=20;AF=0.357;AN=56;BaseQRankSum=-4.493;DP=409;FS=14.357;HRun=13;HaplotypeScore=49.7003;InbreedingCoeff=0.2918;MQ=63.81;MQ0=4;MQRankSum=-0.434;QD=6.48;ReadPosRankSum=-1.715;VQSLOD=0.3089;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:33,2:36:15.64:16,0,308	1/1:5,0:5:5.99:48,6,0	0/0:16,0:9:0.39:0,0,20	0/0:14,0:11:8.48:0,8,36	1/1:4,14:20:34.94:324,35,0	0/1:7,12:20:32.45:188,0,32	0/1:7,7:16:5.89:70,0,6	0/0:26,0:26:36.02:0,36,231	0/1:7,6:13:11.57:47,0,12	0/1:7,0:6:14.59:17,0,15	1/1:2,6:8:11.45:81,11,0	0/1:9,1:10:18.97:19,0,32	0/0:11,0:12:19.78:0,20,126	0/0:6,0:6:8.88:0,9,59	0/1:5,7:12:8.57:72,0,9	1/1:4,9:13:18.02:167,18,0	0/0:21,0:25:34.57:0,35,208	1/1:5,14:19:9.45:230,9,0	0/0:18,0:20:20.82:0,21,120	0/0:6,0:7:16.67:0,17,100	0/0:13,0:15:22.60:0,23,148	0/0:9,0:11:16.87:0,17,108	0/0:6,0:6:5.89:0,6,41	0/0:30,0:32:70.39:0,70,451	1/1:2,6:9:5.64:79,6,0	0/1:4,5:9:20.20:100,0,20	0/0:11,0:11:20.72:0,21,139	0/0:5,0:5:6.30:0,6,56
chr10	43511660	.	G	GTT	2032.92	PASS	AB=0.813;AC=26;AF=0.464;AN=56;BaseQRankSum=6.539;DP=313;FS=6.040;HRun=11;HaplotypeScore=52.6434;InbreedingCoeff=0.7890;MQ=79.41;MQ0=1;MQRankSum=-2.790;QD=17.38;ReadPosRankSum=3.029;VQSLOD=2.0496;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:27:53.66:0,54,538	1/1:0,1:2:5.51:52,6,0	0/0:27,0:18:14.17:0,14,140	0/0:27,0:18:17.50:0,18,109	1/1:9,0:9:24.05:252,24,0	1/1:3,3:8:20.03:203,20,0	1/1:2,4:7:14.54:182,15,0	0/0:23,0:24:50.76:0,51,474	1/1:1,6:6:9.03:125,9,0	1/1:11,0:11:32.88:283,33,0	1/1:7,0:7:15.02:151,15,0	0/0:5,0:5:15.02:0,15,145	0/0:5,0:6:5.94:0,6,108	0/0:2,0:2:6.01:0,6,58	1/1:5,0:5:15:136,15,0	1/1:4,0:4:9:80,9,0	0/0:20,0:22:56.77:0,57,528	1/1:24,0:23:47.99:436,48,0	0/0:22,0:23:44.74:0,45,415	0/1:2,0:3:0.07:0,0,50	0/0:2,0:2:6.01:0,6,58	0/0:4,0:4:12.01:0,12,111	0/0:2,0:2:6.01:0,6,58	0/0:9,0:9:18.03:0,18,175	1/1:8,0:8:11.88:116,12,0	1/1:8,0:8:24.01:222,24,0	0/1:12,0:14:7.53:8,0,308	0/0:15,0:15:35.85:0,36,373
chr10	43511664	.	T	TTG	3072.78	PASS	AB=1.000;AC=20;AF=0.357;AN=56;BaseQRankSum=-3.095;DP=326;FS=7.960;HRun=0;HaplotypeScore=53.5975;InbreedingCoeff=0.6531;MQ=84.11;MQ0=1;MQRankSum=-2.703;QD=31.04;ReadPosRankSum=3.680;VQSLOD=5.2037;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:68.86:0,69,943	0/1:2,0:2:5.79:11,0,6	0/0:36,0:24:36.61:0,37,356	0/0:29,0:19:29.45:0,29,308	1/1:0,9:9:24.07:403,24,0	0/1:9,0:9:6.83:43,0,7	0/1:7,0:7:17.46:60,0,17	0/0:22,0:22:60.17:0,60,832	0/1:7,0:6:12.04:31,0,12	1/1:0,11:11:33.11:547,33,0	1/1:0,7:7:15.04:248,15,0	0/0:5,0:5:15.05:0,15,227	0/0:6,0:6:14.72:0,15,192	0/0:2,0:2:6.02:0,6,91	1/1:0,5:5:15.05:253,15,0	1/1:0,5:5:9.03:153,9,0	0/0:25,0:25:66.14:0,66,907	1/1:7,14:20:57.10:893,57,0	0/0:22,0:22:59.89:0,60,773	0/0:3,0:3:8.70:0,9,102	0/0:2,0:2:6.02:0,6,91	0/0:4,0:4:12.04:0,12,179	0/0:2,0:2:6.02:0,6,91	0/0:10,0:10:24.05:0,24,323	1/1:2,6:8:14.91:226,15,0	1/1:0,8:8:24.08:405,24,0	0/0:14,0:14:23.29:0,23,537	0/0:16,0:16:48.03:0,48,652
chr10	43511694	.	T	TTTTG	2079.63	PASS	AB=0.655;AC=9;AF=0.161;AN=56;BaseQRankSum=-3.413;DP=375;FS=0.802;HRun=0;HaplotypeScore=71.5919;InbreedingCoeff=0.7424;MQ=68.96;MQ0=4;MQRankSum=0.103;QD=33.54;ReadPosRankSum=-1.098;VQSLOD=3.3188;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:57.14:0,57,854	0/0:6,0:6:18.06:0,18,286	0/0:31,0:19:5.70:0,6,84	0/0:26,0:15:2.97:0,3,47	0/0:13,0:13:21.07:0,21,334	0/0:9,0:10:21.07:0,21,333	0/0:8,0:8:9:0,9,117	0/0:21,0:21:15.04:0,15,217	0/0:10,0:9:21.05:0,21,310	1/1:11,4:15:21.02:407,21,0	1/1:4,2:7:9.03:214,9,0	0/0:7,0:7:15.05:0,15,235	0/0:6,0:6:15.04:0,15,217	0/0:4,0:4:12.04:0,12,191	0/0:9,0:9:24.08:0,24,381	0/0:9,0:9:15.05:0,15,238	0/0:31,0:31:57.13:0,57,868	0/1:9,10:19:61.81:543,0,62	0/0:17,0:17:30.10:0,30,457	0/0:9,0:9:24.08:0,24,381	0/0:7,0:7:18.05:0,18,265	0/0:8,0:8:24.08:0,24,361	0/0:6,0:6:15.04:0,15,217	0/0:16,0:16:27.09:0,27,420	1/1:2,6:8:17.90:430,18,0	1/1:4,9:13:27.09:644,27,0	0/0:15,0:15:30.09:0,30,455	0/0:14,0:13:21.07:0,21,334
chr10	43511931	.	CGAATA	C	4511.26	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=13.157;DP=524;FS=10.263;HRun=0;HaplotypeScore=108.6160;InbreedingCoeff=0.9738;MQ=70.82;MQ0=0;MQRankSum=-12.041;QD=43.80;ReadPosRankSum=1.026;VQSLOD=4.4977;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:93.32:0,93,2754	0/0:6,0:6:18.06:0,18,540	0/0:16,0:16:45.15:0,45,1231	0/0:14,0:14:29.43:0,29,881	1/1:3,15:18:42.10:824,42,0	0/0:12,0:12:36.12:0,36,1058	0/0:24,0:24:69.24:0,69,2071	0/0:30,0:30:78.26:0,78,2267	0/0:18,0:18:48.16:0,48,1373	1/1:0,11:11:33.10:646,33,0	1/1:1,4:4:6.02:124,6,0	0/0:18,0:18:45.15:0,45,1294	0/0:21,0:21:51.14:0,51,1446	0/0:19,0:19:48.16:0,48,1392	1/1:3,11:12:21.07:434,21,0	1/1:1,11:10:27.09:558,27,0	0/0:23,0:23:69.24:0,69,2085	1/1:1,17:16:45.15:931,45,0	0/0:18,0:18:39.13:0,39,1134	0/0:10,0:10:27.08:0,27,762	0/0:53,0:53:99:0,148,4408	0/0:12,0:12:36.12:0,36,1066	0/0:10,0:10:21.07:0,21,637	0/0:44,0:44:99:0,111,3338	1/1:3,7:8:12.04:248,12,0	1/1:1,14:13:36.12:745,36,0	0/0:21,0:21:63.16:0,63,1718	0/0:12,0:12:36.12:0,36,1092
chr10	43513421	.	AT	A	841.82	PASS	AB=0.829;AC=23;AF=0.411;AN=56;BaseQRankSum=2.790;DP=458;FS=1.028;HRun=16;HaplotypeScore=64.4179;InbreedingCoeff=0.3349;MQ=68.75;MQ0=9;MQRankSum=1.715;QD=3.71;ReadPosRankSum=1.646;VQSLOD=0.2109;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,0:30:34.86:102,35,0	0/1:4,1:5:6.06:6,0,57	0/0:36,1:17:8.70:0,9,62	0/0:22,0:13:5.29:0,5,32	1/1:6,7:14:31.44:185,31,0	0/0:11,0:15:8.57:0,9,146	0/0:21,0:23:41.60:0,42,323	0/1:14,3:19:3.69:4,0,147	1/1:8,0:8:5.49:26,5,0	1/1:4,12:16:15.09:147,15,0	0/1:5,3:11:10.88:40,0,11	0/1:9,1:10:0.02:0,0,106	0/0:7,0:7:14.97:0,15,123	0/0:7,0:7:14.93:0,15,119	0/1:9,2:10:13.54:41,0,14	1/1:5,3:7:11.72:72,12,0	0/0:36,1:39:51.77:0,52,531	0/1:6,11:19:16.98:121,0,17	0/0:17,1:19:10.13:0,10,152	0/0:9,1:13:24.96:0,25,177	0/1:8,2:10:6.71:7,0,44	0/0:12,1:14:2.72:0,3,106	0/1:10,1:13:0.23:0,0,89	0/0:20,1:19:14.87:0,15,234	1/1:6,10:17:2.39:112,2,0	1/1:2,11:13:23.38:143,23,0	0/1:19,0:19:13.20:13,0,165	0/0:11,0:11:23.95:0,24,197
chr10	43513449	.	T	TC	664.83	PASS	AC=6;AF=0.115;AN=52;BaseQRankSum=2.111;DP=445;FS=7.422;HRun=1;HaplotypeScore=66.2994;InbreedingCoeff=0.8922;MQ=45.84;MQ0=42;MQRankSum=-2.809;QD=15.46;ReadPosRankSum=0.500;VQSLOD=3.0747;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:31:60.09:0,60,715	0/0:9,0:8:24.06:0,24,295	./.	./.	1/1:5,15:19:35.90:417,36,0	0/0:12,0:12:29.74:0,30,330	0/0:28,0:23:44.97:0,45,519	0/0:18,0:16:35.99:0,36,407	0/0:10,0:10:21.04:0,21,242	0/0:21,0:18:51.01:0,51,543	0/0:9,0:8:8.86:0,9,91	0/0:7,0:7:9.03:0,9,114	0/0:8,0:8:12.03:0,12,136	0/0:8,0:8:21.03:0,21,221	1/1:2,5:6:6.02:86,6,0	1/1:5,10:13:21.07:295,21,0	0/0:40,0:38:69.07:0,69,804	0/0:23,0:22:54.11:0,54,637	0/0:19,0:18:51.03:0,51,567	0/0:12,0:12:27.09:0,27,349	0/0:10,0:9:12.35:0,12,163	0/0:16,0:15:30.08:0,30,364	0/0:14,0:14:27.04:0,27,330	0/0:22,0:20:36.09:0,36,435	0/0:20,0:18:42.09:0,42,524	0/0:17,0:17:39.08:0,39,483	0/0:11,0:11:24.02:0,24,290	0/0:11,0:8:20.93:0,21,249
chr10	43513567	.	TG	T	1481.15	PASS	AB=0.988;AC=33;AF=0.589;AN=56;BaseQRankSum=11.235;DP=510;FS=6.311;HRun=1;HaplotypeScore=87.8896;InbreedingCoeff=0.3867;MQ=76.86;MQ0=8;MQRankSum=-3.749;QD=4.00;ReadPosRankSum=2.983;VQSLOD=0.5652;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:30:29.18:148,0,29	1/1:2,0:2:5.02:19,5,0	0/1:58,0:24:4.74:5,0,392	0/0:49,1:26:0.61:0,1,258	1/1:21,1:22:33.96:270,34,0	1/1:15,0:15:27.72:95,28,0	0/1:14,0:14:27.80:28,0,49	0/1:26,0:25:27.98:87,0,28	1/1:10,0:10:11.60:38,12,0	1/1:19,0:18:5.53:44,6,0	1/1:18,0:18:9.64:73,10,0	0/0:14,0:14:42.13:0,42,572	0/0:11,0:11:33.08:0,33,425	0/0:11,0:11:30.09:0,30,403	1/1:19,0:19:0.93:128,1,0	0/1:8,0:8:5.08:47,0,5	0/0:22,0:22:57.19:0,57,775	1/1:15,1:15:28.12:134,28,0	0/1:26,0:25:63.54:64,0,129	1/1:15,0:15:17.65:85,18,0	1/1:11,1:12:19.62:62,20,0	0/0:14,0:14:42.12:0,42,547	0/0:5,0:5:14.72:0,15,177	0/0:11,0:11:27.09:0,27,376	1/1:8,0:8:12:33,12,0	1/1:17,0:17:32.82:117,33,0	0/1:20,2:22:14.10:129,0,14	1/1:12,0:12:4.17:69,4,0
chr10	43513568	.	GT	G	7391.57	PASS	AB=0.981;AC=39;AF=0.696;AN=56;BaseQRankSum=7.112;DP=509;FS=1.928;HRun=7;HaplotypeScore=68.7773;InbreedingCoeff=0.9241;MQ=75.58;MQ0=10;MQRankSum=-2.666;QD=20.59;ReadPosRankSum=-0.235;VQSLOD=4.3412;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:23,7:30:62.87:622,63,0	1/1:0,2:2:6.01:61,6,0	0/0:61,0:23:25.18:0,25,353	0/1:48,1:25:2.07:2,0,217	1/1:1,20:21:60.11:597,60,0	1/1:2,14:16:36.07:364,36,0	1/1:4,10:14:21.04:214,21,0	1/1:4,21:24:63.14:642,63,0	1/1:1,9:10:18.02:175,18,0	1/1:2,17:18:51.12:520,51,0	1/1:2,16:18:42.09:427,42,0	0/0:14,0:14:42.12:0,42,516	0/0:11,0:11:27.09:0,27,340	0/0:11,0:11:33.09:0,33,397	1/1:5,14:19:51.11:519,51,0	1/1:2,5:7:21.05:214,21,0	0/0:24,0:24:66.16:0,66,782	1/1:3,13:15:19.57:369,20,0	1/1:8,17:24:50.52:498,51,0	1/1:0,15:15:42.09:427,42,0	1/1:1,11:12:27.06:275,27,0	0/0:13,0:13:39.12:0,39,490	0/0:5,0:5:15.05:0,15,185	0/0:11,0:11:27.09:0,27,340	1/1:1,8:9:18.04:184,18,0	1/1:1,16:17:48.11:489,48,0	1/1:3,18:21:48.11:489,48,0	1/1:2,10:12:30.06:302,30,0
chr10	43513575	.	TG	T	1431.96	PASS	AB=0.992;AC=28;AF=0.500;AN=56;BaseQRankSum=10.492;DP=526;FS=3.394;HRun=1;HaplotypeScore=87.6316;InbreedingCoeff=0.2923;MQ=71.39;MQ0=13;MQRankSum=-2.110;QD=4.53;ReadPosRankSum=2.944;VQSLOD=0.8916;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:29:24.95:134,0,25	0/1:3,0:3:11.29:11,0,12	0/0:65,3:23:1.80:0,2,292	0/0:44,3:20:9.56:0,10,170	1/1:21,0:21:53.32:270,53,0	1/1:16,1:17:25.83:116,26,0	1/1:11,0:11:15.91:53,16,0	0/1:26,0:25:13.23:86,0,13	0/1:10,1:11:4.35:63,0,4	0/1:20,0:19:27.27:37,0,27	0/1:20,0:20:4.34:63,0,4	0/0:16,0:16:48.03:0,48,554	0/0:10,0:10:30.08:0,30,372	0/0:11,0:11:33.08:0,33,403	1/1:18,0:18:28.49:159,28,0	1/1:7,0:7:16.86:65,17,0	0/0:26,0:26:67.85:0,68,835	0/1:19,0:18:60.32:60,0,61	0/1:23,0:21:9.74:94,0,10	0/1:18,0:18:22.77:69,0,23	0/1:13,0:13:3.27:33,0,3	0/0:13,0:13:39.13:0,39,504	0/0:7,0:7:20.98:0,21,216	0/0:12,0:12:30.08:0,30,373	1/1:9,0:9:14.56:42,15,0	1/1:18,0:18:7.54:59,8,0	1/1:21,0:21:15.47:107,15,0	1/1:11,1:12:4.56:102,5,0
chr10	43513585	.	GTT	G	773.47	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=5.566;DP=519;FS=6.844;HRun=12;HaplotypeScore=100.8320;InbreedingCoeff=0.9283;MQ=72.85;MQ0=12;MQRankSum=-7.471;QD=19.83;ReadPosRankSum=1.715;VQSLOD=2.9488;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:57.09:0,57,550	0/0:3,0:3:8.99:0,9,109	0/0:63,0:23:28.44:0,28,353	0/0:40,0:18:10.03:0,10,146	1/1:4,15:19:42.06:426,42,0	0/0:16,0:16:27.09:0,27,401	0/0:12,0:12:24.06:0,24,338	0/0:23,0:22:54.13:0,54,763	0/0:11,0:11:21.07:0,21,313	0/0:26,0:25:60.04:0,60,557	0/0:21,0:21:57.09:0,57,561	0/0:17,0:17:48.12:0,48,658	0/0:11,0:11:27.08:0,27,384	0/0:13,0:13:36.12:0,36,536	1/1:3,11:14:33.03:336,33,0	1/1:1,5:6:15.01:153,15,0	0/0:26,0:26:71:0,71,1010	0/0:16,0:17:25.73:0,26,332	0/0:22,0:21:45.11:0,45,634	0/0:18,0:18:48.14:0,48,693	0/0:13,0:13:30.10:0,30,445	0/0:15,0:15:42.13:0,42,608	0/0:7,0:8:20.56:0,21,277	0/0:15,0:14:32.60:0,33,456	0/0:7,0:7:17.90:0,18,161	0/0:16,1:17:8.51:0,9,312	0/0:20,0:21:45.10:0,45,627	0/0:14,0:14:42.14:0,42,623
chr10	43513597	.	T	TA	1200.50	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=3.554;DP=485;FS=7.922;HRun=2;HaplotypeScore=82.5626;InbreedingCoeff=0.9790;MQ=73.31;MQ0=8;MQRankSum=1.386;QD=10.72;ReadPosRankSum=1.283;VQSLOD=1.3429;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:13,9:22:55.42:697,55,0	0/0:4,0:4:12:0,12,120	0/0:42,0:17:25.12:0,25,220	0/0:32,0:16:22.69:0,23,180	0/0:17,0:17:43.92:0,44,267	0/0:13,0:13:33.05:0,33,367	0/0:15,0:15:33.06:0,33,359	0/0:24,0:24:62.48:0,62,704	0/0:10,0:10:18.06:0,18,219	1/1:22,1:23:38.75:211,39,0	1/1:19,0:19:21.68:106,22,0	0/0:15,0:15:36.08:0,36,419	0/0:9,0:9:27.07:0,27,320	0/0:14,0:14:36.09:0,36,421	0/0:13,0:13:38.17:0,38,236	0/0:8,0:8:23.62:0,24,161	0/0:28,0:28:75.60:0,76,891	1/1:25,0:25:17.73:202,18,0	0/0:21,0:20:48.05:0,48,537	0/0:17,0:17:48.06:0,48,528	0/0:15,0:15:35.98:0,36,386	0/0:16,0:16:45.12:0,45,530	0/0:10,0:10:29.97:0,30,306	0/0:15,0:14:38.99:0,39,435	1/1:8,0:8:10.94:46,11,0	1/1:15,0:15:21.74:123,22,0	0/0:18,0:18:36.11:0,36,442	0/0:16,0:16:39.10:0,39,456
chr10	43516292	.	C	CG	8327.90	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-11.935;DP=748;FS=1.739;HRun=1;HaplotypeScore=69.9239;InbreedingCoeff=0.9997;MQ=84.51;MQ0=0;MQRankSum=-2.477;QD=38.03;ReadPosRankSum=2.563;VQSLOD=5.5313;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,43:45:99:1694,114,0	0/0:11,0:11:30.10:0,30,388	0/0:23,0:22:57.14:0,57,671	0/0:25,0:25:66.09:0,66,773	1/1:1,25:26:75.17:1041,75,0	0/0:17,0:17:51.17:0,51,661	0/0:30,0:30:87.21:0,87,1057	0/0:23,0:23:69.21:0,69,872	0/0:37,2:39:69.45:0,69,1342	1/1:0,22:22:66.22:981,66,0	1/1:1,14:15:36.05:509,36,0	0/0:19,0:19:57.19:0,57,739	0/0:28,0:28:84.22:0,84,1026	0/0:30,0:30:87.27:0,87,1114	1/1:3,21:24:51.17:763,51,0	1/1:0,19:19:45.15:673,45,0	0/0:38,0:38:99:0,111,1422	1/1:0,25:25:60.20:898,60,0	0/0:28,0:28:84.21:0,84,1025	0/0:21,0:21:57.16:0,57,712	0/0:63,0:63:99:0,183,2274	0/0:29,0:29:81.26:0,81,1044	0/0:19,0:19:54.12:0,54,654	0/0:56,0:56:99:0,159,1956	1/1:0,10:10:27.09:402,27,0	1/1:1,32:33:93.30:1368,93,0	0/0:19,0:19:47.17:0,47,568	0/0:11,0:11:30.10:0,30,389
chr10	43516776	.	TCACA	T	306.91	PASS	AB=0.854;AC=14;AF=0.280;AN=50;BaseQRankSum=2.836;DP=447;FS=6.645;HRun=0;HaplotypeScore=79.2098;InbreedingCoeff=0.5597;MQ=68.72;MQ0=14;MQRankSum=-0.231;QD=2.58;ReadPosRankSum=0.852;VQSLOD=0.9370;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	0/0:9,0:9:12.02:0,12,165	./.	./.	0/0:6,0:8:8.67:0,9,145	0/0:14,0:13:15.03:0,15,223	0/0:11,0:11:6.02:0,6,119	0/0:16,0:16:7.75:0,8,45	0/0:14,0:19:23.78:0,24,331	1/1:13,0:13:3.47:29,3,0	0/1:9,0:9:0:0,0,0	1/1:13,6:20:15.04:213,15,0	0/0:7,0:8:5.75:0,6,82	1/1:4,7:11:6.02:92,6,0	0/0:9,0:8:9:0,9,91	0/0:7,0:7:6.02:0,6,119	0/1:17,1:29:29.46:29,0,53	1/1:14,0:14:5.82:55,6,0	0/0:12,0:12:6.02:0,6,81	0/0:16,0:16:9.03:0,9,129	0/0:27,0:26:39.01:0,39,601	0/0:22,0:22:14.85:0,15,183	0/0:10,0:10:9:0,9,99	0/0:28,0:28:40.37:0,40,595	1/1:10,0:10:0.47:1,0,0	1/1:9,0:12:2.96:28,3,0	0/0:13,0:18:18.03:0,18,272	0/0:7,0:6:12.04:0,12,223
chr10	43516825	.	C	CAA	2375.01	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=4.892;DP=473;FS=1.389;HRun=2;HaplotypeScore=73.1791;InbreedingCoeff=0.7568;MQ=63.16;MQ0=11;MQRankSum=-4.522;QD=13.12;ReadPosRankSum=-3.208;VQSLOD=-0.3533;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:28:80.67:648,81,0	0/1:6,0:6:11.10:11,0,38	0/0:14,0:13:32.90:0,33,293	0/0:12,0:9:17.18:0,17,198	1/1:13,0:12:16.15:118,16,0	0/0:18,0:17:29.39:0,29,243	0/0:24,0:24:53.90:0,54,461	0/0:22,0:22:56.68:0,57,494	0/1:18,0:18:3.97:4,0,266	1/1:16,0:14:31.84:298,32,0	1/1:4,0:4:8.90:60,9,0	0/0:20,0:20:44.69:0,45,364	0/0:11,0:10:29.81:0,30,249	0/0:16,0:16:31.77:0,32,253	1/1:10,0:9:26.95:257,27,0	1/1:2,15:17:3:56,3,0	0/0:28,0:28:56.82:0,57,458	1/1:20,0:20:56.31:439,56,0	0/0:10,0:10:23.64:0,24,184	0/0:17,0:16:36.88:0,37,296	0/0:32,0:30:43.41:0,43,473	0/0:16,0:16:40.14:0,40,362	0/0:9,0:9:23.97:0,24,216	0/0:26,0:27:71.79:0,72,685	1/1:14,0:14:31.18:256,31,0	1/1:19,0:19:50.12:415,50,0	0/1:16,0:16:20.32:20,0,199	0/0:16,0:14:29.91:0,30,238
chr10	43517663	.	TTTTG	T	7851.47	PASS	AB=1.000;AC=36;AF=0.643;AN=56;BaseQRankSum=14.280;DP=659;FS=11.592;HRun=0;HaplotypeScore=168.6348;InbreedingCoeff=0.8430;MQ=62.22;MQ0=2;MQRankSum=-6.387;QD=16.85;ReadPosRankSum=-0.700;VQSLOD=3.3617;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:58,0:57:50.93:461,51,0	1/1:1,10:11:18.06:287,18,0	0/0:15,0:12:19.21:0,19,463	0/0:18,0:15:24.08:0,24,422	1/1:24,0:24:35.78:320,36,0	1/1:6,20:26:42.14:688,42,0	1/1:8,22:30:48.16:786,48,0	1/1:17,19:36:57.16:781,57,0	1/1:11,10:21:17.59:294,18,0	1/1:31,0:30:25.97:300,26,0	1/1:23,0:23:38.78:347,39,0	0/0:19,0:19:51.17:0,51,1191	0/0:18,0:18:27.09:0,27,497	0/0:22,0:22:51.17:0,51,1166	1/1:16,0:16:27.03:251,27,0	1/1:19,0:19:33.04:307,33,0	0/0:24,0:24:51.17:0,51,1168	0/1:23,0:22:52.15:147,0,52	1/1:8,16:24:48.16:721,48,0	1/1:3,14:17:36.12:538,36,0	1/1:13,15:28:30.10:492,30,0	0/0:29,0:29:78.26:0,78,1656	0/0:18,0:18:45.15:0,45,977	0/0:30,0:30:75.25:0,75,1567	1/1:19,0:19:24.03:224,24,0	0/1:30,0:30:7.33:319,0,7	1/1:4,15:19:27.09:442,27,0	1/1:6,5:11:9.03:147,9,0
chr10	43517671	.	GTTTGTTTGTTTGTTTGT	G	15591.09	PASS	AB=0.535;AC=15;AF=0.268;AN=56;BaseQRankSum=7.033;DP=643;FS=5.978;HRun=0;HaplotypeScore=278.1687;InbreedingCoeff=0.7616;MQ=59.70;MQ0=5;MQRankSum=-10.805;QD=64.96;ReadPosRankSum=1.781;VQSLOD=3.6519;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:2,53:54:2.50:2541,0,2	0/0:11,0:11:30.10:0,30,1133	0/0:20,0:14:30.57:0,31,1827	0/0:24,0:15:33.05:0,33,1254	1/1:2,23:25:45.15:1827,45,0	0/0:23,0:23:48.16:0,48,2397	0/0:26,0:26:54.19:0,54,2585	0/0:36,0:36:84.26:0,84,2640	0/0:20,0:20:34.05:0,34,1246	1/1:1,28:28:72.22:2145,72,0	1/1:0,21:21:48.12:1992,48,0	0/0:18,0:18:54.19:0,54,4020	0/0:12,0:12:30.10:0,30,1554	0/0:19,0:19:57.19:0,57,3993	1/1:2,15:17:27.09:1302,27,0	1/1:0,20:20:33.11:1591,33,0	0/0:21,0:21:57.19:0,57,3945	0/1:5,18:22:99:847,0,226	0/0:21,0:21:51.15:0,51,1696	0/0:16,0:16:45.15:0,45,1397	0/0:22,0:22:42.14:0,42,1784	0/0:30,0:30:87.30:0,87,5948	0/0:21,0:21:60.19:0,60,3920	0/0:31,0:31:87.30:0,87,5562	1/1:4,16:20:24.08:1157,24,0	0/1:4,26:30:76.36:2189,0,76	0/0:20,0:20:39.13:0,39,1588	0/0:11,0:11:21.07:0,21,665
chr10	43518200	.	A	AAAG	1201.63	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=0.871;DP=422;FS=12.326;HRun=0;HaplotypeScore=85.2429;InbreedingCoeff=0.5023;MQ=47.39;MQ0=21;MQRankSum=-1.451;QD=8.84;ReadPosRankSum=3.548;VQSLOD=2.0799;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:27:41.30:0,41,367	1/1:0,9:11:14.81:214,15,0	0/0:16,0:4:2.23:0,2,45	0/0:12,0:6:14.79:0,15,125	0/1:24,0:23:56.84:57,0,98	1/1:3,14:17:26.95:485,27,0	1/1:5,12:15:18.02:324,18,0	0/0:23,0:21:47.84:0,48,350	1/1:7,2:9:17.96:228,18,0	0/0:11,0:11:29.95:0,30,286	0/1:13,0:13:4.69:5,0,122	0/0:13,0:13:29.87:0,30,322	0/0:5,0:4:8.67:0,9,103	0/0:13,0:12:35.18:0,35,319	0/1:23,0:22:43.40:43,0,73	0/1:6,0:6:10.01:13,0,10	0/0:29,0:27:71.81:0,72,772	0/0:20,0:20:53.65:0,54,541	0/0:11,0:9:21.84:0,22,160	0/1:14,0:14:1.98:2,0,132	0/0:9,0:9:22.32:0,22,169	0/0:8,0:8:17.90:0,18,169	0/0:13,0:13:33.01:0,33,345	0/0:18,0:16:26.10:0,26,255	0/0:14,0:13:26.86:0,27,220	0/0:18,0:16:37.36:0,37,368	0/0:12,0:12:8.80:0,9,59	0/0:13,0:10:23.73:0,24,169
chr10	43518201	.	A	AAG	931.07	PASS	AB=0.900;AC=12;AF=0.214;AN=56;BaseQRankSum=5.942;DP=424;FS=13.732;HRun=0;HaplotypeScore=80.6130;InbreedingCoeff=0.5080;MQ=47.67;MQ0=20;MQRankSum=-1.974;QD=7.63;ReadPosRankSum=4.867;VQSLOD=2.1097;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:41.80:0,42,353	0/1:11,0:11:7.41:28,0,7	0/0:16,0:4:8.98:0,9,78	0/0:12,0:6:14.87:0,15,143	1/1:15,7:23:10.80:397,11,0	1/1:18,0:17:1.51:86,2,0	1/1:18,0:15:16.51:74,17,0	0/0:24,0:22:27.40:0,27,346	0/1:9,0:9:15.48:15,0,44	0/0:11,0:11:32.91:0,33,300	0/0:13,0:13:21.13:0,21,179	0/0:13,0:13:29.79:0,30,313	0/0:5,0:4:8.99:0,9,96	0/0:13,0:12:35.68:0,36,320	1/1:10,12:21:17.55:393,18,0	0/1:2,3:6:7.53:90,0,8	0/0:30,0:28:71.89:0,72,728	0/0:20,0:20:53.55:0,54,497	0/0:12,0:10:9.32:0,9,151	0/1:14,0:14:7:7,0,128	0/0:10,0:10:13.09:0,13,157	0/0:8,0:8:20.91:0,21,187	0/0:13,0:13:33:0,33,325	0/0:17,0:15:29.10:0,29,261	0/0:14,0:13:28.83:0,29,231	0/0:17,0:16:40.70:0,41,372	0/0:12,0:12:4.98:0,5,45	0/0:13,0:10:20.56:0,21,179
chr10	43518203	.	AAG	A	681.64	PASS	AB=1.000;AC=18;AF=0.321;AN=56;BaseQRankSum=1.439;DP=409;FS=23.347;HRun=0;HaplotypeScore=72.7390;InbreedingCoeff=0.6908;MQ=48.85;MQ0=17;MQRankSum=-1.768;QD=4.73;ReadPosRankSum=-1.633;VQSLOD=0.5353;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:25:35.18:0,35,252	0/0:11,0:11:17.75:0,18,158	0/0:16,0:4:8.68:0,9,61	0/0:14,0:7:20.60:0,21,173	1/1:19,0:18:9.47:75,9,0	0/0:16,0:16:30.06:0,30,323	0/0:16,0:14:17.75:0,18,180	0/0:23,0:22:49.48:0,49,444	0/0:9,0:9:23.90:0,24,203	1/1:10,1:11:17.77:157,18,0	1/1:13,0:13:7.23:116,7,0	0/0:12,0:12:21.50:0,22,275	0/0:5,0:4:5.84:0,6,74	0/0:13,0:12:27.51:0,28,191	1/1:18,0:18:10.03:48,10,0	1/1:5,0:5:7.01:25,7,0	0/0:29,0:27:61.72:0,62,681	1/1:20,1:21:1.29:166,1,0	0/0:14,0:13:38.42:0,38,365	0/1:14,0:14:5.78:6,0,218	0/0:11,0:11:29.89:0,30,250	0/0:7,0:7:8.23:0,8,141	0/0:13,0:13:32.80:0,33,303	0/0:17,0:15:25.93:0,26,290	1/1:13,1:13:3.89:78,4,0	1/1:16,1:16:2.06:183,2,0	0/1:12,0:12:1.84:2,0,58	0/0:13,0:10:15.33:0,15,187
chr10	43518204	.	AG	A	1369.30	PASS	AB=1.000;AC=18;AF=0.321;AN=56;BaseQRankSum=3.573;DP=406;FS=16.997;HRun=1;HaplotypeScore=63.7470;InbreedingCoeff=0.7241;MQ=51.17;MQ0=15;MQRankSum=-5.886;QD=9.92;ReadPosRankSum=-1.281;VQSLOD=-0.2530;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,2:25:15.01:0,15,170	0/0:11,0:11:17.64:0,18,116	0/0:17,0:5:8.49:0,8,56	0/0:15,0:8:17.34:0,17,192	1/1:18,0:17:36.09:171,36,0	0/0:16,0:16:29.82:0,30,228	0/0:17,0:15:20.49:0,20,140	0/0:23,0:22:25.46:0,25,345	0/0:9,0:9:23.66:0,24,170	1/1:11,0:11:29.24:202,29,0	1/1:12,1:13:29.16:189,29,0	0/0:13,0:13:1.83:0,2,191	0/0:4,0:3:5.96:0,6,52	0/0:12,0:11:1.18:0,1,80	1/1:18,0:18:39.99:190,40,0	1/1:5,0:5:11.28:56,11,0	0/0:29,1:28:26.56:0,27,445	1/1:18,2:20:49.89:340,50,0	0/0:15,0:14:35.42:0,35,318	0/1:14,0:14:2.49:2,0,195	0/0:13,0:13:32.61:0,33,253	0/0:7,0:7:8.19:0,8,113	0/0:12,1:13:32.08:0,32,240	0/0:15,1:14:26.14:0,26,228	1/1:9,4:12:25.73:157,26,0	1/1:13,2:14:36.16:240,36,0	0/0:12,0:12:1.52:0,2,40	0/1:11,0:9:20.07:20,0,105
chr10	43518205	.	GA	G	766.85	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=4.404;DP=412;FS=0.000;HRun=17;HaplotypeScore=68.7071;InbreedingCoeff=0.8114;MQ=51.31;MQ0=13;MQRankSum=-2.779;QD=18.70;ReadPosRankSum=1.169;VQSLOD=4.1989;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:49.39:0,49,518	0/0:10,0:10:18.05:0,18,224	0/0:17,0:5:9.01:0,9,105	0/0:15,0:8:23.50:0,23,265	1/1:8,10:17:43.45:419,43,0	0/0:15,0:15:30.09:0,30,398	0/0:16,0:15:20.88:0,21,273	0/0:26,0:25:63.04:0,63,761	0/0:9,0:9:23.99:0,24,300	0/0:11,0:11:6.91:0,7,59	0/0:14,0:14:10.26:0,10,68	0/0:13,0:13:23.81:0,24,359	0/0:4,0:3:6.02:0,6,74	0/0:12,0:11:23.14:0,23,226	1/1:7,11:18:40.90:371,41,0	1/1:1,4:5:11.97:115,12,0	0/0:30,0:28:57.17:0,57,759	0/0:21,0:21:8.47:0,8,99	0/0:16,0:15:44.99:0,45,559	0/0:14,0:14:27.98:0,28,371	0/0:13,0:13:36.10:0,36,456	0/0:8,0:8:20.78:0,21,226	0/0:13,0:13:33.11:0,33,435	0/0:16,0:14:27.09:0,27,350	0/0:12,0:12:6.64:0,7,85	0/0:15,0:14:13.51:0,14,109	0/0:12,0:12:8.39:0,8,91	0/0:11,0:9:21:0,21,264
chr10	43518648	.	GTCATCATCATCATCATCA	G	1934.30	PASS	AB=1.000;AC=11;AF=0.220;AN=50;BaseQRankSum=5.109;DP=738;FS=0.855;HRun=0;HaplotypeScore=321.3780;InbreedingCoeff=0.5193;MQ=58.43;MQ0=17;MQRankSum=-5.556;QD=12.98;ReadPosRankSum=-0.196;VQSLOD=1.8537;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:45:6.02:0,6,296	1/1:3,10:13:9.03:433,9,0	./.	./.	0/1:18,0:18:43.10:43,0,200	1/1:10,7:17:6.02:289,6,0	1/1:23,0:22:6.02:120,6,0	0/0:38,0:29:10.33:0,10,86	1/1:20,16:36:12.04:577,12,0	0/0:32,0:31:33.11:0,33,1231	./.	0/0:22,0:23:42.13:0,42,2692	0/0:26,0:26:42.14:0,42,2641	0/0:34,0:32:63.22:0,63,3858	0/1:23,0:23:14.25:344,0,14	0/1:19,0:19:53.35:279,0,53	0/0:21,0:34:27.56:0,28,1384	0/0:16,0:16:6.02:0,6,237	0/0:35,0:34:19.42:0,19,1008	0/0:30,0:30:18.74:0,19,1281	0/0:51,0:49:12.87:0,13,925	0/0:12,0:12:24.08:0,24,1710	0/0:12,0:12:21.05:0,21,1148	0/0:41,0:43:60.18:0,60,3681	0/0:17,0:16:14.99:0,15,571	0/0:34,0:30:27.05:0,27,592	0/0:23,0:23:42.14:0,42,2209	0/0:25,0:24:21.75:0,22,1449
chr10	43518651	.	A	ATCG	4153.97	PASS	AB=0.886;AC=28;AF=0.500;AN=56;BaseQRankSum=2.406;DP=725;FS=0.000;HRun=0;HaplotypeScore=153.1638;InbreedingCoeff=0.7230;MQ=55.17;MQ0=19;MQRankSum=-2.777;QD=9.44;ReadPosRankSum=-1.695;VQSLOD=2.7184;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:48,0:47:11.92:94,12,0	0/1:12,0:12:3.91:31,0,4	0/0:25,0:14:42.05:0,42,422	0/0:22,0:16:42.01:0,42,440	0/0:20,0:20:43.22:0,43,342	1/1:15,0:15:9.37:140,9,0	1/1:22,0:21:50.66:372,51,0	1/1:34,0:25:51.03:403,51,0	1/1:34,0:34:12.62:205,13,0	1/1:30,0:29:53.75:448,54,0	1/1:7,0:6:2.98:21,3,0	0/0:23,0:23:66.06:0,66,792	0/0:25,0:25:72.02:0,72,794	0/0:32,0:30:46.55:0,47,940	0/0:22,0:22:56.60:0,57,507	0/0:17,0:17:38.72:0,39,337	0/0:32,0:32:62.85:0,63,524	0/1:18,0:18:39.29:87,0,39	1/1:11,23:33:38.67:492,39,0	1/1:6,24:29:16.83:326,17,0	0/1:9,42:51:15.28:205,0,15	0/0:12,0:12:32.78:0,33,408	0/0:12,0:12:30.01:0,30,347	0/0:43,0:43:99:0,126,1266	0/1:18,0:17:1.72:72,0,2	1/1:33,0:29:52.17:405,52,0	1/1:24,1:25:52.69:549,53,0	1/1:6,20:25:15.73:304,16,0
chr10	43518663	.	A	ATCGTCG	1873.61	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=7.382;DP=751;FS=0.000;HRun=0;HaplotypeScore=212.6993;InbreedingCoeff=0.0587;MQ=50.78;MQ0=26;MQRankSum=-2.359;QD=4.83;ReadPosRankSum=-0.450;VQSLOD=2.4435;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:5,39:53:6.49:171,6,0	0/0:12,0:12:12.04:0,12,185	0/0:21,0:11:24.07:0,24,378	0/0:16,0:10:29.66:0,30,425	0/0:21,0:21:18.84:0,19,369	0/0:12,0:12:21.07:0,21,337	0/0:26,0:25:60.10:0,60,794	0/1:40,0:20:21.06:21,0,125	0/0:25,0:25:27.09:0,27,422	0/1:33,0:31:54.40:510,0,54	1/1:10,0:9:3.01:40,3,0	0/0:27,0:27:78.24:0,78,1437	0/0:27,0:27:69.22:0,69,1297	0/0:34,0:32:84.11:0,84,1533	0/0:23,0:23:34.80:0,35,804	0/0:19,0:19:35.96:0,36,483	0/0:32,0:32:66.20:0,66,1023	0/1:17,0:17:89.84:151,0,90	0/1:27,0:26:14.27:14,0,235	1/1:31,0:30:1.03:146,1,0	0/1:58,0:55:53.29:103,0,53	0/0:13,0:12:33.08:0,33,624	0/0:12,0:12:27.09:0,27,534	0/0:43,0:42:99:0,120,2059	0/1:22,0:21:12.49:169,0,12	0/1:40,0:36:74.97:399,0,75	0/1:27,0:27:99:156,0,128	0/1:29,0:28:73.59:151,0,74
chr10	43518699	.	ATCATCATCACCACC	A	2304.17	PASS	AB=0.965;AC=10;AF=0.179;AN=56;BaseQRankSum=8.030;DP=716;FS=10.918;HRun=0;HaplotypeScore=298.5976;InbreedingCoeff=0.2792;MQ=53.12;MQ0=21;MQRankSum=-6.092;QD=12.26;ReadPosRankSum=-1.611;VQSLOD=0.3618;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:54,0:53:99:148,0,337	0/1:12,0:12:99:133,0,149	0/0:29,0:12:36.12:0,36,1001	0/0:24,0:13:39.13:0,39,1119	0/1:11,1:15:9.35:223,0,9	0/1:10,0:10:88.31:88,0,221	0/0:20,0:19:57.20:0,57,1549	0/0:28,0:15:44.87:0,45,443	0/1:36,0:36:99:140,0,1398	0/0:35,0:34:74.15:0,74,855	0/0:10,0:9:8.09:0,8,30	0/0:24,0:24:69.24:0,69,3122	0/0:26,0:26:75.26:0,75,2930	0/0:32,0:30:87.26:0,87,3769	1/1:16,6:22:55.80:875,56,0	1/1:15,5:20:49.43:753,49,0	0/0:34,0:34:78.14:0,78,2304	0/0:15,0:14:28.05:0,28,292	0/0:19,0:16:48.02:0,48,883	0/0:28,0:28:71.34:0,71,1501	0/0:62,0:59:99:0,106,1762	0/0:18,0:16:48.16:0,48,2069	0/0:11,0:11:30.06:0,30,1288	0/0:40,0:39:99:0,114,4310	0/1:19,0:18:99:102,0,312	0/0:23,0:23:54.84:0,55,446	0/0:27,0:27:78:0,78,1930	0/0:23,0:23:56.50:0,56,1572
chr10	43518706	.	TCAC	T	4406	PASS	AB=0.959;AC=18;AF=0.321;AN=56;BaseQRankSum=1.040;DP=722;FS=1.819;HRun=0;HaplotypeScore=174.6989;InbreedingCoeff=0.5661;MQ=58.10;MQ0=18;MQRankSum=1.600;QD=15.68;ReadPosRankSum=-0.001;VQSLOD=4.3127;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:47:41.78:0,42,332	0/0:12,0:12:0.04:0,0,39	0/0:34,0:17:50.85:0,51,462	0/0:26,0:15:44.89:0,45,427	1/1:17,0:17:33.46:277,33,0	0/0:11,0:11:6.21:0,6,77	0/0:21,0:20:59.63:0,60,472	1/1:31,0:19:50.96:464,51,0	0/0:40,0:40:57.36:0,57,523	0/0:33,0:32:1.96:0,2,448	0/0:11,0:10:5.99:0,6,48	0/0:24,0:24:54.34:0,54,849	0/0:29,0:29:33.80:0,34,766	0/0:29,0:28:40.98:0,41,839	1/1:24,0:24:71.80:615,72,0	1/1:23,0:23:62.70:521,63,0	0/0:32,0:32:4.95:0,5,376	0/1:14,0:13:26.43:26,0,116	1/1:21,0:19:30.99:429,31,0	1/1:26,1:27:35.65:440,36,0	1/1:59,1:58:80.57:809,81,0	0/0:18,0:16:33.48:0,33,527	0/0:11,0:11:30.01:0,30,426	0/0:38,0:37:64.18:0,64,1055	0/1:18,0:17:49.87:50,0,90	0/0:24,0:24:38.66:0,39,400	0/1:24,2:26:23.44:474,0,23	0/1:18,2:20:26.67:301,0,27
chr10	43519204	.	AGAGAGAGAGAGAGAGAGG	A	3061.16	PASS	AB=0.919;AC=13;AF=0.232;AN=56;BaseQRankSum=8.818;DP=488;FS=12.102;HRun=0;HaplotypeScore=188.2208;InbreedingCoeff=0.5111;MQ=54.96;MQ0=27;MQRankSum=-0.268;QD=18.55;ReadPosRankSum=0.693;VQSLOD=1.6417;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:30:35.68:36,0,1676	0/0:7,0:7:20.27:0,20,970	0/1:26,0:5:11.95:12,0,50	0/0:30,0:13:14.86:0,15,305	0/0:24,0:24:5.09:0,5,527	0/0:19,0:18:9.01:0,9,364	0/0:10,0:10:9.03:0,9,423	0/0:23,0:22:62.40:0,62,717	0/0:9,0:8:18.06:0,18,1084	1/1:1,17:17:43.19:642,43,0	1/1:3,12:15:11.25:464,11,0	0/0:10,0:10:21.47:0,21,825	0/0:16,0:14:21.06:0,21,1183	0/0:12,0:10:19.78:0,20,1044	0/1:3,0:3:7.97:8,0,64	0/1:9,0:9:0.98:1,0,693	0/0:27,0:27:69.21:0,69,3775	0/1:5,11:15:8.71:148,0,9	0/0:19,0:15:44.59:0,45,1428	0/0:11,0:10:27.03:0,27,1054	0/0:19,0:18:43.02:0,43,2128	0/0:13,0:13:21.91:0,22,303	0/0:18,0:18:45.05:0,45,928	0/0:23,0:20:36.07:0,36,1879	1/1:2,20:22:21.07:1051,21,0	1/1:2,21:22:62.17:869,62,0	0/0:19,0:18:48.07:0,48,2159	0/0:13,0:11:33.09:0,33,1081
chr10	43519473	.	TAA	T	2663.03	PASS	AB=0.929;AC=13;AF=0.241;AN=54;BaseQRankSum=-3.218;DP=382;FS=2.108;HRun=12;HaplotypeScore=59.2027;InbreedingCoeff=0.8217;MQ=56.16;MQ0=3;MQRankSum=3.790;QD=20.17;ReadPosRankSum=3.182;VQSLOD=3.0315;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,25:26:63.14:641,63,0	0/0:1,0:2:3:0,3,28	0/1:11,1:9:18.47:18,0,122	0/0:5,0:5:4.23:0,4,151	0/0:20,0:21:50.63:0,51,686	0/0:1,0:13:30.01:0,30,277	0/0:4,0:8:18.02:0,18,184	0/0:7,0:25:48.54:0,49,456	0/0:2,0:9:26.92:0,27,237	1/1:1,20:21:57.10:580,57,0	1/1:2,8:10:21:213,21,0	0/0:8,0:8:21.07:0,21,313	0/0:16,0:16:39:0,39,529	0/0:7,0:8:21.05:0,21,278	0/0:12,0:12:26.58:0,27,357	0/0:7,0:7:18.06:0,18,268	0/0:25,0:25:57.14:0,57,819	1/1:4,17:21:39.03:397,39,0	0/0:7,0:22:51.99:0,52,486	0/0:2,0:13:29.54:0,30,275	0/0:2,0:5:11.98:0,12,106	./.	0/0:7,0:7:21.07:0,21,313	0/0:4,0:4:9.03:0,9,134	1/1:1,15:16:36.08:366,36,0	1/1:4,21:25:63.10:633,63,0	0/0:7,0:17:40.34:0,40,362	0/0:2,0:18:42.04:0,42,401
chr10	43520397	.	G	GCA	526.34	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=2.392;DP=628;FS=14.773;HRun=0;HaplotypeScore=159.1092;InbreedingCoeff=0.7668;MQ=42.20;MQ0=54;MQRankSum=-0.871;QD=11.70;ReadPosRankSum=-0.516;VQSLOD=2.7343;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:45:14.42:0,14,218	0/0:7,0:5:5.74:0,6,75	0/0:13,0:2:6.02:0,6,86	0/0:28,0:11:33.06:0,33,481	1/1:18,2:19:12.03:175,12,0	0/0:13,0:13:18.06:0,18,264	0/0:27,0:25:45.08:0,45,638	0/0:29,0:23:66.19:0,66,919	0/0:20,0:18:30.10:0,30,431	0/0:35,0:31:29.56:0,30,764	0/0:11,0:10:2.41:0,2,23	0/0:17,0:13:14.89:0,15,222	0/0:16,0:13:30.10:0,30,440	0/0:12,0:11:12.04:0,12,163	1/1:8,2:9:10.08:169,10,0	1/1:14,1:11:21.07:315,21,0	0/0:36,0:33:70.46:0,70,987	0/0:31,0:24:4.90:0,5,517	0/0:14,0:12:11.82:0,12,464	0/0:12,0:11:27.09:0,27,398	0/0:75,0:67:91.67:0,92,1227	0/0:14,0:12:23.66:0,24,341	0/0:21,0:20:39.13:0,39,581	0/0:37,0:33:75.25:0,75,1120	0/0:19,0:16:14.90:0,15,127	0/0:22,0:21:14.53:0,15,354	0/0:12,0:10:30.10:0,30,424	0/0:13,0:10:30.07:0,30,405
chr10	43520401	.	G	GCA	1244.53	PASS	AB=0.948;AC=8;AF=0.143;AN=56;BaseQRankSum=2.606;DP=614;FS=3.377;HRun=0;HaplotypeScore=156.0314;InbreedingCoeff=0.3618;MQ=41.63;MQ0=62;MQRankSum=-6.541;QD=7.83;ReadPosRankSum=0.415;VQSLOD=3.2794;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:45,4:44:0.12:124,0,0	0/0:6,0:4:5.74:0,6,77	0/0:11,0:2:6.02:0,6,84	0/0:21,0:9:27.07:0,27,380	0/0:16,0:15:0.46:0,0,2	0/0:13,0:13:18.06:0,18,264	0/0:29,0:27:47.69:0,48,620	0/0:27,0:18:47.17:0,47,636	0/0:20,0:18:30.10:0,30,435	0/1:31,0:25:99:444,0,145	1/1:9,2:10:3.95:51,4,0	0/0:19,0:14:23.90:0,24,325	0/0:16,0:13:30.08:0,30,415	0/0:12,0:11:12.04:0,12,172	0/0:10,0:9:8.82:0,9,40	0/0:15,0:11:7:0,7,33	0/0:37,0:34:73.45:0,73,1009	0/1:30,1:24:99:205,0,292	0/0:15,0:11:2.78:0,3,390	0/0:11,0:10:24.06:0,24,331	0/0:77,1:70:86.47:0,86,1182	0/0:13,0:11:20.67:0,21,321	0/0:22,0:21:39.12:0,39,549	0/0:38,0:33:75.23:0,75,1109	1/1:18,1:16:12.02:180,12,0	0/1:16,2:16:17.84:374,0,18	0/0:13,0:11:33.08:0,33,433	0/0:12,0:9:27.06:0,27,352
chr10	43520412	.	T	TCCA	863.20	PASS	AB=0.941;AC=7;AF=0.130;AN=54;BaseQRankSum=6.378;DP=553;FS=15.920;HRun=0;HaplotypeScore=171.8750;InbreedingCoeff=0.0445;MQ=40.60;MQ0=66;MQRankSum=-6.013;QD=6.04;ReadPosRankSum=-0.701;VQSLOD=1.8847;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:42,5:42:74.82:246,0,75	0/0:6,0:4:5.98:0,6,76	./.	0/0:9,0:3:9.03:0,9,125	0/0:13,0:12:3.01:0,3,55	0/0:14,0:13:15.05:0,15,266	0/0:34,0:32:45.15:0,45,812	0/0:23,0:11:33.11:0,33,574	0/0:20,0:18:18.04:0,18,301	0/1:27,0:20:99:188,0,391	1/1:5,2:6:3.48:40,3,0	0/0:19,0:14:24.55:0,25,444	0/0:12,0:9:18.06:0,18,317	0/0:11,0:10:9:0,9,133	0/0:9,0:7:8.90:0,9,116	0/0:13,0:9:17.85:0,18,284	0/0:35,0:32:61.95:0,62,1111	0/1:26,1:20:99:117,0,690	0/0:13,0:11:31.89:0,32,503	0/0:11,0:10:21.07:0,21,391	0/0:72,0:63:75.30:0,75,1218	0/0:13,0:11:20.75:0,21,376	0/0:18,0:17:30.10:0,30,535	0/0:41,0:36:78.19:0,78,1324	0/1:18,1:16:29.63:227,0,30	0/1:14,1:12:99:171,0,127	0/0:12,0:10:27.09:0,27,498	0/0:10,0:7:21.06:0,21,341
chr10	43520413	.	G	GAACTCA	943.24	PASS	AB=0.951;AC=8;AF=0.148;AN=54;BaseQRankSum=7.556;DP=541;FS=8.510;HRun=0;HaplotypeScore=183.6919;InbreedingCoeff=0.2094;MQ=40.51;MQ0=66;MQRankSum=-7.755;QD=6.69;ReadPosRankSum=-2.974;VQSLOD=1.5291;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:40,5:40:87.76:134,0,88	0/0:6,0:4:2.40:0,2,69	./.	0/0:6,0:1:3.01:0,3,40	0/0:12,0:11:3.01:0,3,76	0/0:14,0:13:15.05:0,15,371	0/0:34,0:32:45.04:0,45,1121	0/0:23,0:11:33.08:0,33,710	0/0:19,0:17:14.88:0,15,382	0/1:27,0:20:99:411,0,405	1/1:5,2:6:4.28:21,4,0	0/0:19,0:14:23.94:0,24,606	0/0:12,0:9:21.05:0,21,460	0/0:10,0:9:5.85:0,6,152	0/0:9,0:7:8.62:0,9,97	0/0:12,0:8:15.05:0,15,264	0/0:36,0:33:61.14:0,61,1507	0/1:26,1:20:99:122,0,914	0/0:14,0:12:22.70:0,23,643	0/0:11,0:10:21.06:0,21,526	0/0:72,0:63:43.79:0,44,1324	0/0:13,0:11:20.95:0,21,440	0/0:18,0:17:30.09:0,30,665	0/0:37,0:32:72.11:0,72,1705	1/1:18,1:16:6.55:97,7,0	0/1:15,1:12:99:288,0,184	0/0:11,0:9:27.09:0,27,687	0/0:10,0:7:21.03:0,21,399
chr10	43520426	.	T	TCCA	216.41	PASS	AB=0.924;AC=7;AF=0.125;AN=56;BaseQRankSum=4.854;DP=539;FS=2.590;HRun=0;HaplotypeScore=174.7528;InbreedingCoeff=-0.0629;MQ=40.51;MQ0=65;MQRankSum=-4.291;QD=2.28;ReadPosRankSum=-0.510;VQSLOD=2.8142;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,3:33:10.58:0,11,270	0/0:8,0:6:6.14:0,6,81	0/0:4,0:1:3.01:0,3,55	0/0:11,0:2:2.98:0,3,22	0/0:7,0:7:11.71:0,12,177	0/0:17,0:16:14.90:0,15,234	0/0:31,1:30:29.56:0,30,421	0/0:30,0:20:57.03:0,57,830	0/0:21,0:19:15.05:0,15,241	0/1:20,1:13:65.28:65,0,190	1/1:7,0:6:0.47:1,0,0	0/0:20,0:15:24.55:0,25,444	0/0:17,0:14:23.98:0,24,394	0/0:12,0:11:12.03:0,12,171	0/1:11,2:11:31.64:113,0,32	0/1:14,1:11:46.55:79,0,47	0/0:36,0:34:66.18:0,66,1106	0/1:22,2:18:46.34:46,0,559	0/1:14,1:11:25.94:26,0,285	0/0:9,0:8:12.02:0,12,167	0/0:66,2:58:67.50:0,68,1097	0/0:9,0:7:8.71:0,9,165	0/0:16,0:15:27.09:0,27,493	0/0:38,0:33:78.22:0,78,1366	0/0:17,1:16:1.66:0,2,10	0/0:16,0:11:0.17:0,0,207	0/0:11,0:9:21.03:0,21,306	0/0:5,0:2:6.01:0,6,66
chr10	43520427	.	G	GAACTCA	412.22	PASS	AB=0.935;AC=11;AF=0.196;AN=56;BaseQRankSum=6.940;DP=541;FS=2.111;HRun=0;HaplotypeScore=193.4458;InbreedingCoeff=-0.0450;MQ=40.33;MQ0=65;MQRankSum=-6.219;QD=2.45;ReadPosRankSum=-4.438;VQSLOD=0.9362;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:35,3:33:8.28:8,0,300	0/0:8,0:6:6.95:0,7,91	0/0:4,0:1:3.01:0,3,76	0/0:12,0:2:3.01:0,3,41	0/0:8,0:7:9.50:0,10,229	0/0:16,0:15:12.51:0,13,258	0/0:31,1:30:29.40:0,29,557	0/0:31,0:21:59.37:0,59,1030	0/0:21,0:19:15.04:0,15,266	0/1:20,1:13:99:136,0,219	1/1:8,0:7:1.31:2,1,0	0/0:20,0:15:24.55:0,25,612	0/0:17,0:14:30.54:0,31,563	0/0:13,0:12:12.04:0,12,258	0/1:11,2:11:82.30:99,0,82	0/1:13,1:10:27.66:28,0,67	0/0:35,0:33:63.22:0,63,1509	0/1:22,2:18:99:169,0,505	0/1:14,1:11:49.98:50,0,358	0/0:9,0:8:12.03:0,12,232	0/0:65,2:57:50.54:0,51,1582	0/0:9,0:7:8.92:0,9,162	0/0:17,0:16:27.56:0,28,671	0/0:39,0:34:78.15:0,78,1767	1/1:17,1:16:0.62:1,1,0	0/1:17,0:12:45.37:45,0,161	0/0:10,0:8:15.05:0,15,369	0/0:5,0:2:6.01:0,6,76
chr10	43520435	.	GCA	G	1399.11	PASS	AB=0.903;AC=22;AF=0.393;AN=56;BaseQRankSum=0.924;DP=582;FS=17.440;HRun=0;HaplotypeScore=174.6440;InbreedingCoeff=-0.2140;MQ=42.18;MQ0=60;MQRankSum=-1.310;QD=3.46;ReadPosRankSum=-1.090;VQSLOD=1.3738;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,4:35:26.84:0,27,298	0/1:4,6:8:0.02:0,0,17	0/0:11,0:2:6.02:0,6,103	0/0:18,2:5:11.68:0,12,102	0/1:9,0:8:8.33:23,0,8	0/1:14,2:15:2.36:2,0,31	0/1:29,0:27:16.50:87,0,16	0/0:32,0:23:37.80:0,38,547	1/1:7,15:20:3.83:68,4,0	0/1:21,7:20:99:291,0,226	1/1:6,4:9:2.27:35,2,0	0/0:19,4:18:35.73:0,36,536	0/1:16,2:16:65.84:66,0,384	0/0:6,8:13:2.66:0,3,206	0/0:17,0:15:10.62:0,11,83	0/1:15,0:12:3.44:3,0,17	0/1:30,0:29:99:141,0,532	0/1:21,3:19:99:142,0,372	0/1:15,0:11:20.60:21,0,235	0/1:10,0:9:70.86:71,0,126	0/1:69,3:62:99:157,0,546	0/0:9,2:9:12.51:0,13,173	0/1:21,1:21:47.21:47,0,476	0/1:37,0:33:99:185,0,907	0/1:10,7:16:0.58:1,0,1	0/1:11,5:11:46.34:201,0,46	0/0:9,0:8:17.77:0,18,172	1/1:2,0:1:2.04:6,2,0
chr10	43520437	.	A	ATG	1048.56	PASS	AB=0.921;AC=28;AF=0.500;AN=56;BaseQRankSum=5.935;DP=604;FS=9.883;HRun=0;HaplotypeScore=187.6738;InbreedingCoeff=0.4711;MQ=43.80;MQ0=56;MQRankSum=-2.239;QD=2.90;ReadPosRankSum=-1.780;VQSLOD=1.8393;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:34:13.63:0,14,264	0/1:8,1:8:2.83:45,0,3	0/0:14,0:3:6.02:0,6,76	0/0:21,0:6:11.82:0,12,130	1/1:9,0:8:12.01:124,12,0	1/1:5,11:15:5.69:62,6,0	0/1:12,18:28:0.74:10,0,1	1/1:33,0:26:18.29:195,18,0	1/1:23,0:21:5.14:99,5,0	0/1:28,0:20:2.73:3,0,99	1/1:12,0:12:1.50:4,2,0	0/0:23,0:18:35.95:0,36,454	0/0:20,0:17:28.44:0,28,347	0/0:14,0:14:18.02:0,18,200	0/1:18,0:16:10.79:94,0,11	1/1:15,0:12:11.87:132,12,0	0/0:31,0:30:50.45:0,50,537	0/1:24,0:20:67.75:68,0,195	1/1:15,0:11:19.75:128,20,0	1/1:8,0:8:10.76:47,11,0	0/1:75,0:65:31.24:124,0,31	0/0:12,0:10:15.03:0,15,176	0/0:24,0:23:39.08:0,39,482	0/0:37,0:34:63.10:0,63,800	1/1:17,0:18:3.46:12,3,0	1/1:16,0:12:4.65:56,5,0	1/1:9,0:8:1.72:32,2,0	0/0:3,0:1:2.99:0,3,24
chr10	43520440	.	T	TGC	74.11	PASS	AB=0.980;AC=9;AF=0.161;AN=56;BaseQRankSum=2.727;DP=615;FS=9.870;HRun=0;HaplotypeScore=195.8481;InbreedingCoeff=-0.0036;MQ=44.78;MQ0=54;MQRankSum=-1.112;QD=0.56;ReadPosRankSum=1.014;VQSLOD=2.1518;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,2:32:13.14:0,13,196	0/1:8,0:7:16.50:16,0,18	0/0:19,0:5:11.97:0,12,153	0/0:28,0:6:14.80:0,15,181	1/1:9,1:9:6.32:26,6,0	0/1:16,0:15:16.42:16,0,30	0/0:27,1:26:9:0,9,65	0/0:33,0:27:1.80:0,2,292	0/1:25,0:23:41.13:41,0,50	0/0:27,1:20:14.22:0,14,337	0/0:15,0:14:5.91:0,6,44	0/0:22,0:18:36.12:0,36,551	0/0:21,0:18:38.99:0,39,499	0/0:13,0:13:21.02:0,21,289	0/1:19,0:17:26.03:26,0,27	0/1:15,0:12:7.03:19,0,7	0/0:31,0:30:67.27:0,67,866	0/1:23,2:21:30.56:31,0,285	0/1:14,1:11:34.97:35,0,114	0/0:10,0:10:14.17:0,14,73	0/0:70,1:61:64.65:0,65,435	0/0:11,0:9:15.05:0,15,227	0/0:25,0:24:51.06:0,51,685	0/0:38,0:35:86.90:0,87,1142	0/0:20,1:20:2.57:0,3,11	0/0:18,0:12:6.33:0,6,123	0/0:9,0:8:17.38:0,17,108	0/0:3,0:1:3.01:0,3,40
chr10	43520448	.	T	TGC	1904.56	PASS	AB=0.996;AC=20;AF=0.357;AN=56;BaseQRankSum=5.473;DP=649;FS=44.588;HRun=0;HaplotypeScore=193.4588;InbreedingCoeff=0.0212;MQ=48.51;MQ0=49;MQRankSum=-3.842;QD=4.95;ReadPosRankSum=1.465;VQSLOD=1.6468;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:45,0:38:3.36:3,0,349	0/1:8,0:7:2.88:20,0,3	0/0:22,0:8:7.99:0,8,132	0/0:34,0:10:16.83:0,17,233	0/1:13,0:11:14.56:17,0,15	0/1:16,0:15:21.40:21,0,26	0/0:32,0:31:29.06:0,29,223	1/1:32,3:29:14.83:599,15,0	0/1:26,0:24:40.21:40,0,74	0/1:27,0:19:56.48:56,0,152	0/1:15,0:14:7.41:7,0,14	0/0:22,0:19:39.12:0,39,602	0/0:23,0:20:51:0,51,630	0/0:15,0:15:30.04:0,30,384	0/1:22,0:20:16.98:17,0,79	0/1:16,0:13:5.28:20,0,5	0/0:33,0:32:81.02:0,81,986	0/1:25,0:22:97.13:97,0,314	1/1:12,1:9:18.32:244,18,0	0/1:9,0:9:6.74:127,0,7	0/1:61,4:56:19.42:541,0,19	0/0:12,0:10:15.05:0,15,240	0/0:26,0:25:54.04:0,54,746	0/0:38,0:35:87.09:0,87,1207	0/1:22,0:21:2.73:3,0,7	0/1:19,0:14:11.38:101,0,11	1/1:9,0:9:16.82:161,17,0	0/0:3,0:1:2.98:0,3,22
chr10	43520449	.	ATG	A	742.12	PASS	AB=0.973;AC=14;AF=0.250;AN=56;BaseQRankSum=6.640;DP=662;FS=24.415;HRun=0;HaplotypeScore=202.3325;InbreedingCoeff=0.3494;MQ=48.60;MQ0=46;MQRankSum=0.181;QD=3.42;ReadPosRankSum=0.574;VQSLOD=1.1481;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:38:18.58:0,19,261	0/0:8,0:7:0.76:0,1,45	0/0:25,0:9:18.10:0,18,246	0/0:36,0:11:27:0,27,361	1/1:13,0:11:11.90:77,12,0	0/0:17,0:16:4.62:0,5,112	0/0:32,0:31:29.89:0,30,441	0/1:30,4:29:26.05:247,0,26	0/0:30,0:28:2.73:0,3,261	0/0:29,0:21:0.20:0,0,99	0/1:15,0:14:2.04:2,0,7	0/0:22,0:19:39.13:0,39,640	0/0:23,0:20:44.80:0,45,717	0/0:16,0:16:33.10:0,33,506	0/1:23,0:21:1.18:108,0,1	1/1:16,0:14:12.51:63,13,0	0/0:33,0:32:54.18:0,54,864	0/0:25,0:22:11.97:0,12,229	1/1:14,0:11:13.51:74,14,0	1/1:8,1:9:10.94:49,11,0	0/1:61,4:56:37.81:246,0,38	0/0:13,0:11:17.71:0,18,272	0/0:27,0:26:53.70:0,54,848	0/0:38,0:35:44.02:0,44,1236	0/0:22,0:21:3.37:0,3,20	0/1:19,0:14:11.18:11,0,15	0/1:9,0:9:25.79:26,0,48	0/0:3,0:1:2.37:0,2,8
chr10	43520451	.	G	GTA	823.31	PASS	AB=1.000;AC=12;AF=0.214;AN=56;BaseQRankSum=3.332;DP=679;FS=13.169;HRun=0;HaplotypeScore=210.3160;InbreedingCoeff=0.2396;MQ=48.73;MQ0=45;MQRankSum=1.796;QD=3.88;ReadPosRankSum=-0.312;VQSLOD=1.4486;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:39:12.10:0,12,217	0/0:8,0:7:5.28:0,5,28	0/0:25,0:9:20.62:0,21,234	0/0:41,0:14:24.11:0,24,329	1/1:9,4:11:14.44:230,14,0	0/0:18,0:17:4.87:0,5,94	0/0:32,0:31:29.49:0,29,405	0/1:36,0:32:88.72:96,0,89	0/0:33,0:31:2.80:0,3,221	0/0:31,0:23:44.14:0,44,268	0/0:15,0:14:3.71:0,4,16	0/0:21,0:19:42.13:0,42,621	0/0:23,0:20:48.08:0,48,705	0/0:17,0:17:33.09:0,33,478	1/1:19,4:21:2.20:212,2,0	1/1:5,11:14:14.43:246,14,0	0/0:31,0:30:75.57:0,76,978	0/0:24,0:22:30.37:0,30,330	0/1:15,0:12:13.73:50,0,14	0/1:9,0:9:5.44:5,0,17	0/1:68,0:60:99:110,0,102	0/0:14,0:12:17.97:0,18,254	0/0:27,0:26:57.17:0,57,819	0/0:38,0:35:71.78:0,72,1199	0/1:22,0:21:6.88:7,0,17	0/0:19,0:14:30.06:0,30,179	0/1:10,0:10:19.30:19,0,54	0/0:3,0:1:3.01:0,3,38
chr10	43520507	.	TGC	T	531.32	PASS	AB=0.877;AC=6;AF=0.107;AN=56;BaseQRankSum=8.537;DP=1080;FS=17.369;HRun=0;HaplotypeScore=262.9443;InbreedingCoeff=-0.1199;MQ=48.25;MQ0=16;MQRankSum=-6.613;QD=1.69;ReadPosRankSum=-2.463;VQSLOD=0.9074;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:59,5:61:16.03:16,0,1050	0/0:9,0:9:15.54:0,16,259	0/0:52,0:14:39.20:0,39,482	0/0:59,0:20:47.16:0,47,726	0/1:44,0:42:32.94:33,0,471	0/0:21,0:21:38.88:0,39,681	0/0:37,0:37:92.93:0,93,1603	0/0:28,0:27:78.04:0,78,1252	0/0:40,0:40:94.58:0,95,1632	0/1:77,18:92:99:441,0,2355	0/1:16,11:27:20.65:21,0,353	0/0:29,0:29:84.18:0,84,1504	0/0:33,0:33:75.53:0,76,1558	0/0:26,0:26:56.22:0,56,1254	0/0:39,0:39:38.05:0,38,725	0/0:34,0:34:44.48:0,44,763	0/0:34,0:34:88.45:0,88,1605	0/1:28,2:29:31.86:32,0,969	0/0:31,0:27:78.19:0,78,1352	0/0:16,0:16:45.13:0,45,799	0/0:110,0:110:99:0,252,4545	0/0:19,0:19:53.89:0,54,894	0/0:20,0:20:57:0,57,1044	0/0:57,0:57:99:0,153,2710	0/0:28,7:35:35.57:0,36,856	0/1:44,10:53:99:113,0,1679	0/0:24,0:24:53.41:0,53,1089	0/0:11,0:11:32.47:0,32,566
chr10	43520585	.	ATG	A	6133.96	PASS	AB=0.748;AC=9;AF=0.161;AN=56;BaseQRankSum=7.676;DP=1361;FS=0.000;HRun=0;HaplotypeScore=307.2925;InbreedingCoeff=-0.1916;MQ=53.73;MQ0=12;MQRankSum=-2.701;QD=10.11;ReadPosRankSum=1.713;VQSLOD=4.0159;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:64,28:90:99:802,0,1304	0/0:10,0:10:30.10:0,30,519	0/0:43,0:25:42.06:0,42,586	0/0:44,0:30:53.65:0,54,854	0/1:27,15:42:99:107,0,634	0/0:10,0:10:27.09:0,27,462	0/0:49,0:49:99:0,111,1887	0/0:31,0:31:81.12:0,81,1256	0/0:55,0:53:99:0,103,1937	0/1:106,31:135:99:1339,0,2739	0/1:25,17:42:99:423,0,658	0/0:37,0:36:99:0,99,1610	0/0:31,0:31:75.24:0,75,1253	0/0:31,0:31:81.26:0,81,1357	0/1:43,25:63:99:714,0,663	0/1:32,18:48:99:548,0,623	0/0:57,0:57:99:0,157,2668	0/1:29,19:47:99:711,0,958	0/0:25,0:23:57.19:0,57,929	0/0:21,0:20:48.15:0,48,798	0/0:154,0:153:99:0,322,5430	0/0:34,0:34:96.33:0,96,1638	0/0:27,0:27:75.25:0,75,1258	0/0:60,0:61:99:0,134,2515	0/1:40,21:61:99:740,0,1068	0/1:47,20:64:99:751,0,1147	0/0:21,0:18:54.16:0,54,879	0/0:12,0:12:29.13:0,29,448
chr10	43520609	.	C	CTG	1212.89	PASS	AB=0.773;AC=3;AF=0.054;AN=56;BaseQRankSum=2.818;DP=1361;FS=19.752;HRun=0;HaplotypeScore=371.8178;InbreedingCoeff=-0.0582;MQ=50.72;MQ0=19;MQRankSum=-0.293;QD=7.31;ReadPosRankSum=-0.311;VQSLOD=1.7136;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:93,0:92:99:0,164,1980	0/0:11,0:11:24.08:0,24,315	0/0:38,0:10:13.34:0,13,179	0/0:32,0:20:48.10:0,48,580	0/1:32,14:46:99:415,0,193	0/0:14,0:14:17.99:0,18,233	0/0:46,0:46:87.25:0,87,1132	0/0:34,0:33:75.24:0,75,973	0/0:51,0:49:99:0,99,1249	0/0:133,0:129:99:0,260,3916	0/0:50,0:50:99:0,117,1466	0/0:37,0:36:90.23:0,90,1137	0/0:33,0:33:78.25:0,78,1025	0/0:33,0:33:93.30:0,93,1222	0/1:48,21:63:99:377,0,629	0/1:37,14:49:99:520,0,635	0/0:59,0:59:99:0,166,2169	0/0:50,0:50:99:0,126,1617	0/0:24,0:17:48.11:0,48,597	0/0:24,0:23:41.92:0,42,507	0/0:143,0:140:99:0,271,3445	0/0:35,0:35:87.22:0,87,1129	0/0:29,0:29:78.17:0,78,1007	0/0:52,0:52:99:0,138,1845	0/0:66,0:66:99:0,171,2169	0/0:82,0:80:99:0,170,2413	0/0:17,0:13:39.13:0,39,512	0/0:6,0:6:18.06:0,18,236
chr10	43520618	.	CCT	C	2530.64	PASS	AB=0.981;AC=13;AF=0.232;AN=56;BaseQRankSum=5.415;DP=1340;FS=16.422;HRun=0;HaplotypeScore=381.9584;InbreedingCoeff=0.3038;MQ=49.85;MQ0=16;MQRankSum=-0.725;QD=7.05;ReadPosRankSum=3.182;VQSLOD=2.3199;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:91,0:90:99:0,177,3015	0/1:10,1:11:25.09:100,0,25	0/0:33,0:7:19.46:0,19,174	0/0:36,0:18:41.27:0,41,672	0/0:49,0:49:39.24:0,39,775	1/1:12,1:13:3.98:93,4,0	0/1:42,0:42:52.35:233,0,52	0/1:38,0:37:45.87:290,0,46	1/1:47,0:45:75.32:551,75,0	0/0:126,0:122:99:0,329,6240	0/0:50,0:50:99:0,120,2211	0/0:35,0:35:99:0,102,1960	0/0:32,0:32:90.20:0,90,1693	0/0:37,0:37:99:0,108,2100	0/0:66,0:60:86.59:0,87,1425	0/0:49,0:47:99:0,100,1655	0/0:60,0:60:99:0,178,3312	0/0:51,0:51:99:0,141,2636	0/1:24,0:19:25.54:172,0,26	0/1:25,0:24:31.28:119,0,31	0/1:130,0:127:99:764,0,108	0/0:34,0:34:93.23:0,93,1671	0/0:28,0:28:78.23:0,78,1482	0/0:51,1:52:99:0,151,2932	0/0:67,0:66:99:0,171,3306	0/0:85,0:82:99:0,209,3984	0/1:18,1:15:3.23:202,0,3	1/1:10,0:10:29.16:173,29,0
chr10	43520619	.	CTG	C	8777.03	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=0.213;DP=1338;FS=10.954;HRun=0;HaplotypeScore=362.4767;InbreedingCoeff=0.9937;MQ=49.79;MQ0=16;MQRankSum=-0.354;QD=24.52;ReadPosRankSum=-0.897;VQSLOD=4.0500;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:91,0:90:99:0,145,2458	1/1:4,7:11:21.07:275,21,0	0/0:31,1:7:11.35:0,11,124	0/0:36,0:17:33.07:0,33,501	0/0:49,0:49:30.36:0,30,556	1/1:4,9:13:27:313,27,0	1/1:7,35:42:72.15:907,72,0	1/1:8,30:37:93.29:1206,93,0	1/1:9,39:46:99:1356,105,0	0/0:126,0:122:99:0,302,5055	0/0:50,0:50:99:0,108,1779	0/0:34,0:34:96.26:0,96,1612	0/0:32,0:32:81.28:0,81,1381	0/0:37,0:37:99:0,102,1748	0/0:66,0:60:71.79:0,72,1129	0/0:50,0:48:90.03:0,90,1341	0/0:60,0:60:99:0,157,2665	0/0:51,0:51:99:0,126,2154	1/1:10,13:18:46.73:561,47,0	1/1:6,19:24:33.89:436,34,0	1/1:40,89:126:99:2787,220,0	0/0:32,0:32:75.26:0,75,1286	0/0:28,0:28:72.23:0,72,1193	0/0:52,0:52:99:0,142,2419	0/0:67,0:66:99:0,162,2693	0/0:86,0:83:99:0,197,3317	1/1:3,16:17:42.13:546,42,0	1/1:2,8:10:30.10:391,30,0
chr10	43520659	.	ATG	A	12835.43	PASS	AB=0.955;AC=31;AF=0.554;AN=56;BaseQRankSum=11.175;DP=1202;FS=16.936;HRun=0;HaplotypeScore=363.6632;InbreedingCoeff=0.8943;MQ=53.52;MQ0=6;MQRankSum=-6.727;QD=17.32;ReadPosRankSum=1.079;VQSLOD=4.1538;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:18,50:67:71.73:898,72,0	0/0:4,0:13:12.01:0,12,110	0/1:40,2:21:30.92:31,0,479	0/0:51,0:27:69.14:0,69,970	1/1:12,18:44:1.71:187,2,0	0/0:6,0:24:38.55:0,39,416	0/0:17,0:37:71.10:0,71,626	1/1:17,17:34:63.18:777,63,0	0/0:18,0:56:99:0,117,1090	1/1:24,64:87:99:2274,131,0	1/1:4,32:36:38.52:496,39,0	0/0:45,0:45:99:0,117,1897	0/0:32,0:32:84.29:0,84,1400	0/0:42,0:42:79.38:0,79,1794	1/1:8,19:40:29.72:345,30,0	1/1:8,20:37:61.80:618,62,0	0/0:52,1:53:99:0,103,2161	1/1:12,18:30:50.61:681,51,0	1/1:5,14:19:42.13:521,42,0	1/1:3,23:26:41.57:517,42,0	1/1:26,71:98:99:1295,105,0	0/0:27,0:27:60.19:0,60,978	0/0:26,0:26:69.24:0,69,1140	0/0:54,0:54:99:0,135,2243	1/1:10,52:61:89.11:1145,89,0	1/1:13,71:82:99:2145,136,0	1/1:4,14:18:51.08:601,51,0	1/1:2,8:10:24.08:305,24,0
chr10	43520694	.	A	ATG	482.38	PASS	AB=0.921;AC=7;AF=0.125;AN=56;BaseQRankSum=11.782;DP=1205;FS=23.941;HRun=0;HaplotypeScore=442.5241;InbreedingCoeff=-0.0624;MQ=52.80;MQ0=8;MQRankSum=-10.344;QD=1.32;ReadPosRankSum=-3.050;VQSLOD=0.4317;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:52,0:51:13.78:14,0,62	0/0:11,0:11:9.02:0,9,117	0/1:42,0:20:7.21:7,0,263	0/0:53,0:27:36.37:0,36,429	0/0:29,11:40:6.58:0,7,58	0/0:25,0:25:48.14:0,48,609	0/0:43,0:43:99:0,102,1310	0/0:43,0:42:99:0,102,1290	0/0:57,0:57:99:0,123,1597	0/1:71,0:68:99:149,0,328	0/0:38,0:38:9.51:0,10,99	0/0:46,0:46:99:0,113,1570	0/0:35,0:35:81.23:0,81,1036	0/0:40,0:40:99:0,105,1336	0/1:41,22:59:3.01:120,0,3	0/1:27,19:45:53.94:150,0,54	0/0:44,0:44:97.37:0,97,1374	0/1:23,0:24:27.45:27,0,182	0/0:34,0:34:87.10:0,87,1017	0/0:35,0:35:63.17:0,63,805	0/0:112,0:111:99:0,187,2387	0/0:25,0:25:57.17:0,57,727	0/0:28,0:28:66.19:0,66,841	0/0:48,0:47:99:0,135,1691	0/0:53,0:52:4.98:0,5,114	0/1:68,0:67:99:142,0,355	0/0:18,0:18:51.17:0,51,663	0/0:10,0:10:15.05:0,15,195
chr10	43520696	.	GTGTGTGTA	G	4020	PASS	AB=0.828;AC=6;AF=0.107;AN=56;BaseQRankSum=9.318;DP=1216;FS=17.006;HRun=0;HaplotypeScore=524.0369;InbreedingCoeff=-0.1285;MQ=52.06;MQ0=11;MQRankSum=-8.090;QD=13.44;ReadPosRankSum=-0.997;VQSLOD=-0.3718;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:50,0:49:13.27:13,0,35	0/0:11,0:11:9.03:0,9,375	0/0:46,0:23:41.91:0,42,1021	0/0:55,0:27:48.14:0,48,1314	0/0:41,0:41:4.58:0,5,60	0/0:26,0:26:48.16:0,48,1856	0/0:45,0:45:99:0,114,4017	0/0:45,0:43:99:0,114,3848	0/0:57,0:57:99:0,126,5155	0/1:53,15:66:99:1451,0,1417	0/1:26,11:37:99:195,0,102	0/0:48,0:48:99:0,126,4785	0/0:34,0:34:78.25:0,78,2978	0/0:42,0:42:99:0,111,4225	0/0:65,0:62:18.19:0,18,263	0/0:47,0:46:20.32:0,20,239	0/0:41,0:41:99:0,111,4513	0/1:20,4:24:99:268,0,355	0/0:36,0:35:90.27:0,90,2874	0/0:35,0:35:63.22:0,63,2632	0/0:110,0:109:99:0,186,7648	0/0:25,0:25:63.20:0,63,2356	0/0:28,0:28:66.20:0,66,2648	0/0:49,0:48:99:0,122,5021	0/1:36,16:51:99:164,0,124	0/1:46,22:67:99:1928,0,730	0/0:18,0:18:51.16:0,51,1951	0/0:8,0:8:15.05:0,15,505
chr10	43520698	.	GTGTGTA	G	1599.61	PASS	AB=0.955;AC=8;AF=0.143;AN=56;BaseQRankSum=11.182;DP=1212;FS=21.500;HRun=0;HaplotypeScore=494.4192;InbreedingCoeff=-0.1716;MQ=52.54;MQ0=13;MQRankSum=-8.230;QD=3.98;ReadPosRankSum=-0.583;VQSLOD=0.0000;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:22,24:45:66.27:83,0,66	0/0:11,0:11:9.03:0,9,303	0/0:49,0:24:33.92:0,34,1169	0/0:59,0:27:36.52:0,37,1228	0/0:39,0:39:8.55:0,9,156	0/0:24,0:24:48.16:0,48,1651	0/0:46,0:46:99:0,117,3780	0/0:45,0:43:99:0,123,3836	0/0:56,0:56:99:0,126,4392	0/1:67,0:65:99:559,0,1375	0/1:37,0:37:52.89:53,0,142	0/0:47,0:47:99:0,132,4297	0/0:34,0:34:84.27:0,84,2706	0/0:40,0:40:99:0,117,3796	0/1:64,0:61:15.82:16,0,225	0/1:48,0:47:13.97:14,0,206	0/0:43,0:43:99:0,115,3974	0/1:23,0:23:72.84:73,0,469	0/0:36,0:35:99:0,99,2920	0/0:36,0:36:66.21:0,66,2257	0/0:115,0:113:99:0,201,6771	0/0:25,0:25:63.22:0,63,2071	0/0:27,0:27:69.22:0,69,2260	0/0:51,0:50:99:0,142,4478	0/1:51,0:50:41.42:41,0,196	0/1:65,1:66:99:896,0,807	0/0:18,0:18:51.18:0,51,1724	0/0:8,0:8:15.05:0,15,490
chr10	43520704	.	A	ATG	2685.79	PASS	AB=0.751;AC=12;AF=0.214;AN=56;BaseQRankSum=13.429;DP=1213;FS=26.831;HRun=0;HaplotypeScore=420.2381;InbreedingCoeff=0.5400;MQ=51.86;MQ0=15;MQRankSum=-10.825;QD=6.85;ReadPosRankSum=-4.682;VQSLOD=1.8706;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:35,12:46:3.19:0,3,15	0/0:9,0:9:12.04:0,12,159	0/0:54,0:26:46.54:0,47,514	0/0:61,0:26:37.23:0,37,466	1/1:19,8:33:4.84:60,5,0	0/0:21,0:21:48.14:0,48,624	0/0:47,0:47:99:0,108,1404	0/0:49,0:47:91.95:0,92,1472	0/0:57,0:57:99:0,135,1746	0/1:42,22:64:27.48:1184,0,27	0/1:22,10:33:4.03:88,0,4	0/0:48,0:48:99:0,129,1651	0/0:34,0:34:78.22:0,78,1001	0/0:39,0:39:99:0,111,1442	1/1:29,17:60:18.05:133,18,0	1/1:22,14:52:8.64:139,9,0	0/0:45,0:45:99:0,112,1617	1/1:21,5:26:16.57:380,17,0	0/0:37,0:35:84.25:0,84,1079	0/0:35,0:35:69.21:0,69,916	0/0:111,0:109:99:0,197,2613	0/0:23,0:23:60.18:0,60,780	0/0:25,0:25:66.22:0,66,877	0/0:49,0:48:99:0,131,1700	0/1:29,23:52:11.01:105,0,11	0/1:51,12:65:99:761,0,104	0/0:18,0:18:48.16:0,48,628	0/0:10,0:10:17.93:0,18,180
chr10	43520734	.	A	ATG	6319.65	PASS	AB=0.683;AC=15;AF=0.268;AN=56;BaseQRankSum=-1.161;DP=1261;FS=3.440;HRun=0;HaplotypeScore=330.9557;InbreedingCoeff=0.6965;MQ=52.64;MQ0=25;MQRankSum=-3.258;QD=14.83;ReadPosRankSum=-1.145;VQSLOD=4.0987;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:21,30:50:11.61:200,12,0	0/0:14,0:14:21.07:0,21,267	0/0:64,0:31:56.76:0,57,712	0/0:70,0:31:61.51:0,62,741	1/1:22,11:30:4.78:99,5,0	0/0:21,0:21:33.10:0,33,420	0/0:52,0:52:99:0,120,1527	0/0:49,0:46:99:0,113,1325	0/0:57,0:57:99:0,117,1461	0/1:36,26:59:42.60:1542,0,43	1/1:15,13:26:21.07:351,21,0	0/0:42,0:42:99:0,99,1207	0/0:36,0:36:99:0,99,1246	0/0:43,0:43:99:0,102,1283	1/1:30,37:65:41.47:757,41,0	1/1:24,29:52:22.77:554,23,0	0/0:51,0:51:99:0,114,1554	0/1:17,16:33:62.68:628,0,63	0/0:39,0:33:87.14:0,87,1041	0/0:36,0:36:78.25:0,78,988	0/0:123,0:121:99:0,235,2949	0/0:24,0:23:54.17:0,54,681	0/0:33,0:33:81.23:0,81,1002	0/0:45,0:44:99:0,111,1382	1/1:21,23:44:21.58:585,22,0	0/1:28,27:53:12.85:1603,0,13	0/0:22,0:22:51.15:0,51,636	0/0:12,0:12:36.12:0,36,458
chr10	43521703	.	AG	A	1190.50	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.573;DP=673;FS=1.389;HRun=2;HaplotypeScore=139.1201;InbreedingCoeff=0.9620;MQ=78.61;MQ0=0;MQRankSum=-2.270;QD=26.46;ReadPosRankSum=0.328;VQSLOD=3.2659;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,42:45:99:1285,99,0	0/0:11,0:11:30.10:0,30,448	0/0:15,0:15:41.99:0,42,553	0/0:17,0:17:12.04:0,12,524	0/0:17,0:17:48.16:0,48,717	0/0:22,0:22:63.21:0,63,941	0/0:27,0:27:81.27:0,81,1213	0/0:23,0:23:69.23:0,69,1015	0/0:35,0:35:99:0,99,1446	0/0:25,0:25:72.23:0,72,1052	0/0:15,0:15:42.13:0,42,608	0/0:24,0:24:72.24:0,72,1079	0/0:18,0:18:54.17:0,54,788	0/0:29,0:29:84.28:0,84,1255	0/0:32,0:32:96.28:0,96,1400	0/0:22,0:22:66.21:0,66,968	0/0:36,0:36:99:0,105,1555	0/0:31,0:31:87.25:0,87,1259	0/0:25,0:24:72.24:0,72,1060	0/0:11,0:11:33.11:0,33,494	0/0:57,0:57:99:0,169,2473	0/0:16,0:16:48.16:0,48,719	0/0:17,0:17:48.16:0,48,719	0/0:31,0:31:93.30:0,93,1375	0/0:13,0:13:39.13:0,39,584	0/0:28,0:28:81.27:0,81,1206	0/0:24,0:22:66.21:0,66,963	0/0:7,0:7:18.06:0,18,270
chr10	43521853	.	T	TAC	244.30	PASS	AB=0.933;AC=5;AF=0.089;AN=56;BaseQRankSum=6.604;DP=622;FS=1.952;HRun=0;HaplotypeScore=143.7998;InbreedingCoeff=0.6954;MQ=67.01;MQ0=0;MQRankSum=-4.444;QD=4.07;ReadPosRankSum=-2.414;VQSLOD=2.6800;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:13.59:0,14,44	0/0:7,0:7:18.06:0,18,249	0/0:8,0:7:18.06:0,18,252	0/0:28,0:22:34.02:0,34,517	1/1:14,2:16:3.01:51,3,0	0/0:17,0:17:48.15:0,48,652	0/0:27,0:27:68.83:0,69,939	0/0:23,0:23:60.19:0,60,821	0/0:17,0:17:42.14:0,42,586	0/0:31,0:31:87.18:0,87,1091	0/0:15,0:15:27.09:0,27,375	0/0:22,0:22:66.17:0,66,883	0/0:19,0:19:48.15:0,48,652	0/0:19,0:19:51.14:0,51,674	1/1:25,5:30:31.79:210,32,0	0/1:13,1:14:11.08:101,0,11	0/0:37,0:37:99:0,99,1349	0/0:28,0:28:51.17:0,51,708	0/0:19,0:19:36.12:0,36,495	0/0:12,0:12:27.09:0,27,387	0/0:68,0:68:99:0,120,1618	0/0:17,0:17:46.04:0,46,628	0/0:16,0:16:39.12:0,39,523	0/0:24,0:24:72.22:0,72,988	0/0:17,0:17:36.09:0,36,469	0/0:27,0:27:81.25:0,81,1101	0/0:27,0:27:56.75:0,57,786	0/0:10,0:10:27.09:0,27,375
chr10	43521856	.	ACG	A	1139	PASS	AB=0.700;AC=7;AF=0.125;AN=56;BaseQRankSum=6.403;DP=615;FS=2.337;HRun=0;HaplotypeScore=136.7290;InbreedingCoeff=0.7678;MQ=66.12;MQ0=1;MQRankSum=-5.079;QD=12.80;ReadPosRankSum=-2.557;VQSLOD=3.3270;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,18:28:32.80:471,33,0	0/0:8,0:8:24.04:0,24,399	0/0:8,0:7:18.06:0,18,343	0/0:28,0:21:29.60:0,30,652	1/1:6,10:16:2.86:28,3,0	0/0:16,0:16:48.11:0,48,885	0/0:28,0:28:78.15:0,78,1349	0/0:22,0:22:62.81:0,63,956	0/0:14,0:14:42.14:0,42,792	0/0:30,0:30:86.56:0,87,1293	0/0:17,0:17:30.07:0,30,498	0/0:22,0:22:66.19:0,66,1212	0/0:19,0:19:51.16:0,51,923	0/0:18,0:18:51.16:0,51,934	1/1:11,20:31:39.04:516,39,0	0/1:8,6:14:30.54:264,0,31	0/0:39,0:39:99:0,114,2017	0/0:26,0:26:54.18:0,54,938	0/0:19,0:19:36.12:0,36,637	0/0:11,0:11:27.08:0,27,462	0/0:64,0:64:99:0,120,2015	0/0:18,0:18:48.13:0,48,862	0/0:15,0:15:39.08:0,39,647	0/0:25,0:25:75.26:0,75,1431	0/0:17,0:17:36.08:0,36,571	0/0:27,0:27:80.56:0,81,1319	0/0:25,0:25:63.47:0,63,985	0/0:10,0:10:27.04:0,27,444
chr10	43521866	.	ACG	A	4249.26	PASS	AB=0.987;AC=29;AF=0.518;AN=56;BaseQRankSum=11.163;DP=564;FS=1.306;HRun=0;HaplotypeScore=123.2138;InbreedingCoeff=0.7713;MQ=60.80;MQ0=5;MQRankSum=-3.940;QD=12.65;ReadPosRankSum=0.326;VQSLOD=4.7969;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:24:8.56:49,9,0	0/0:10,0:10:30.04:0,30,449	0/0:7,0:6:1.65:0,2,7	0/1:24,0:16:32.57:33,0,35	0/1:15,0:15:0.14:0,0,0	0/0:19,0:18:49.05:0,49,786	0/0:28,0:28:76.36:0,76,1109	1/1:5,11:16:33.01:360,33,0	0/0:17,0:17:43.38:0,43,670	1/1:3,15:18:47.97:574,48,0	1/1:8,9:17:12.02:135,12,0	0/0:19,0:19:51.12:0,51,724	0/0:16,0:16:35.84:0,36,480	0/0:20,0:20:9.09:0,9,622	1/1:30,0:30:26.80:90,27,0	0/1:10,0:10:24.17:24,0,37	0/0:40,0:40:99:0,105,1577	1/1:7,19:26:36.11:445,36,0	1/1:5,11:15:29.96:300,30,0	1/1:5,4:9:15.03:174,15,0	1/1:45,10:54:14.86:473,15,0	0/0:16,0:16:39.10:0,39,581	0/0:8,0:8:18.06:0,18,305	0/0:28,0:28:61.02:0,61,1112	1/1:14,3:17:9.01:89,9,0	1/1:13,11:24:66.17:774,66,0	1/1:4,19:23:44.58:507,45,0	1/1:7,3:9:21:223,21,0
chr10	43521884	.	ACACGCGCG	A	1439.83	PASS	AB=0.911;AC=11;AF=0.204;AN=54;BaseQRankSum=8.293;DP=565;FS=0.000;HRun=0;HaplotypeScore=177.6872;InbreedingCoeff=0.2912;MQ=55.99;MQ0=11;MQRankSum=-7.636;QD=9.47;ReadPosRankSum=1.082;VQSLOD=2.6817;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:31,0:28:8.87:198,9,0	0/0:15,0:15:39.13:0,39,1410	./.	0/1:22,0:13:21.81:22,0,102	1/1:5,5:10:0.24:1,0,0	0/0:21,0:20:57.13:0,57,2102	0/0:30,0:30:81.28:0,81,2701	0/1:16,0:16:8.88:9,0,337	0/0:20,0:19:54.17:0,54,1983	0/0:20,0:20:10.97:0,11,482	0/0:22,0:22:9.02:0,9,93	0/0:19,0:19:51.16:0,51,1691	0/0:10,0:10:24.04:0,24,842	0/0:20,0:20:57.12:0,57,1862	1/1:8,21:29:36.07:930,36,0	0/1:5,8:13:99:353,0,112	0/0:39,0:39:54.71:0,55,3707	0/0:23,0:23:38.84:0,39,611	0/1:15,0:12:18.83:19,0,107	0/0:9,0:9:18.03:0,18,261	0/0:16,0:44:18.71:0,19,382	0/0:13,0:13:39.13:0,39,1306	0/0:9,0:9:27.09:0,27,979	0/0:37,0:37:99:0,99,3538	0/1:14,0:15:40.01:52,0,40	0/0:23,0:23:3.82:0,4,687	0/0:23,0:24:45.90:0,46,741	0/0:8,0:7:7.51:0,8,28
chr10	43521886	.	ACG	A	4256.11	PASS	AB=0.913;AC=32;AF=0.571;AN=56;BaseQRankSum=11.832;DP=562;FS=7.853;HRun=0;HaplotypeScore=117.2710;InbreedingCoeff=0.7488;MQ=56.76;MQ0=12;MQRankSum=-4.222;QD=12.37;ReadPosRankSum=0.130;VQSLOD=3.7621;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,0:27:8.75:61,9,0	0/1:15,0:15:0.14:0,0,408	1/1:6,0:1:2.96:19,3,0	0/1:20,0:11:5.63:6,0,22	0/1:8,0:10:0.13:0,0,0	0/0:21,0:20:14.65:0,15,680	0/0:30,0:30:56.34:0,56,870	1/1:16,0:16:38.69:305,39,0	0/0:20,0:19:45.09:0,45,682	1/1:16,4:20:52.10:516,52,0	1/1:4,18:22:9.03:116,9,0	0/0:18,0:18:32.84:0,33,504	0/0:10,0:10:21.05:0,21,341	0/0:20,0:20:47.12:0,47,679	1/1:25,0:28:34.29:176,34,0	0/1:11,0:13:32.69:75,0,33	0/0:39,0:39:76.32:0,76,1281	1/1:19,6:25:60.05:664,60,0	1/1:12,2:11:23.90:205,24,0	1/1:8,1:9:21.02:229,21,0	1/1:38,8:44:28.91:317,29,0	0/0:14,0:14:27.34:0,27,435	0/0:9,0:9:26.91:0,27,326	0/0:37,0:37:30.54:0,31,1066	1/1:3,12:15:6:63,6,0	1/1:14,8:22:66.14:764,66,0	1/1:10,13:23:45.66:624,46,0	1/1:7,1:7:14.95:116,15,0
chr10	43521890	.	GCGCA	G	1721.67	PASS	AB=0.964;AC=20;AF=0.357;AN=56;BaseQRankSum=12.943;DP=554;FS=2.438;HRun=0;HaplotypeScore=136.8716;InbreedingCoeff=-0.0320;MQ=55.82;MQ0=14;MQRankSum=-4.147;QD=5.27;ReadPosRankSum=2.820;VQSLOD=2.7586;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:24:8.83:54,9,0	0/0:15,0:15:42.02:0,42,903	0/1:11,0:3:3.97:4,0,44	0/1:17,0:7:16.55:17,0,68	0/1:10,0:9:0.10:0,0,0	0/0:22,0:21:35.17:0,35,1228	0/0:28,0:28:77.91:0,78,1546	0/1:15,1:17:74.13:229,0,74	0/0:19,0:18:48.16:0,48,1196	0/1:21,0:21:99:154,0,119	1/1:22,0:22:5.02:14,5,0	0/0:16,0:16:13.27:0,13,845	0/0:9,0:9:24.07:0,24,588	0/0:19,0:19:47.14:0,47,1095	1/1:26,0:26:18.86:265,19,0	0/1:13,0:13:62.83:109,0,63	0/0:38,0:38:92.08:0,92,2101	0/1:23,1:24:57.99:112,0,58	0/1:11,2:10:34.95:177,0,35	0/1:8,1:9:14.31:117,0,14	0/1:47,1:46:34.74:224,0,35	0/0:15,0:15:41.04:0,41,778	0/0:10,0:10:29.93:0,30,585	0/0:36,0:36:76.74:0,77,1904	0/1:15,0:16:18.43:29,0,18	0/1:22,0:23:61.61:149,0,62	0/1:23,0:23:62.76:122,0,63	0/1:7,0:6:4.99:114,0,5
chr10	43521892	.	GCA	G	1095.86	PASS	AB=0.951;AC=26;AF=0.464;AN=56;BaseQRankSum=13.123;DP=557;FS=0.943;HRun=0;HaplotypeScore=122.9783;InbreedingCoeff=-0.0302;MQ=55.85;MQ0=13;MQRankSum=-1.583;QD=2.65;ReadPosRankSum=2.906;VQSLOD=1.8466;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:25:3.69:9,4,0	0/1:14,1:15:18.74:19,0,464	0/1:11,0:3:10.36:10,0,44	0/1:18,0:8:3.11:3,0,69	0/1:11,0:10:0:0,0,0	0/0:20,1:21:12.78:0,13,599	0/0:27,1:28:21.88:0,22,759	0/1:15,1:15:12.51:73,0,13	0/0:18,0:17:45.14:0,45,668	0/1:22,0:22:33.01:71,0,33	1/1:21,0:22:8.52:41,9,0	0/1:16,1:18:10.44:10,0,455	0/0:9,0:9:24.07:0,24,349	0/0:18,0:18:39.13:0,39,613	1/1:26,0:26:9.70:89,10,0	0/1:13,0:13:23.71:24,0,36	0/0:36,1:37:39.44:0,39,1037	1/1:24,0:24:39.23:231,39,0	0/1:12,0:10:8.70:71,0,9	0/1:9,1:10:4.76:76,0,5	0/1:45,1:44:16.75:122,0,17	0/1:14,1:15:2.32:2,0,360	0/0:11,0:11:24.05:0,24,329	0/1:30,7:37:30.62:31,0,918	0/1:18,0:18:13.32:13,0,56	0/1:23,0:23:4.58:147,0,5	1/1:22,0:22:13.42:197,13,0	0/1:5,2:6:13.97:26,0,14
chr10	43522156	.	G	GTATA	1223.21	PASS	AB=0.875;AC=6;AF=0.107;AN=56;BaseQRankSum=0.100;DP=501;FS=3.210;HRun=0;HaplotypeScore=108.8766;InbreedingCoeff=0.5546;MQ=58.04;MQ0=0;MQRankSum=-2.906;QD=19.73;ReadPosRankSum=-3.034;VQSLOD=2.8025;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:63.20:0,63,1073	0/0:9,0:9:24.08:0,24,418	0/0:11,0:9:4.53:0,5,25	0/0:8,0:3:6.02:0,6,80	1/1:4,0:11:11.97:100,12,0	0/0:29,0:29:72.19:0,72,1171	0/0:21,0:21:54.14:0,54,868	1/1:10,24:37:57.07:1214,57,0	0/0:19,0:19:39.13:0,39,689	0/0:19,0:19:51.17:0,51,904	0/0:21,0:21:48.12:0,48,757	0/0:17,0:17:45.14:0,45,761	0/0:14,0:14:42.12:0,42,685	0/0:14,0:14:36.08:0,36,544	0/1:11,0:11:22.90:23,0,187	0/1:2,0:3:18.90:19,0,54	0/0:31,0:31:81.17:0,81,1262	0/0:23,0:23:63.08:0,63,1070	0/0:33,0:33:84.22:0,84,1313	0/0:19,0:19:51.17:0,51,895	0/0:18,0:18:42.11:0,42,688	0/0:16,0:16:36.12:0,36,640	0/0:7,0:7:21.06:0,21,345	0/0:6,0:6:18.06:0,18,310	0/0:22,0:22:57.20:0,57,1003	0/0:23,0:23:63.20:0,63,1066	0/0:19,0:19:51.17:0,51,899	0/0:16,0:16:45.15:0,45,773
chr10	43522217	.	TA	T	8345.95	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=18.168;DP=576;FS=1.836;HRun=3;HaplotypeScore=97.6247;InbreedingCoeff=0.9997;MQ=79.38;MQ0=0;MQRankSum=-1.926;QD=31.03;ReadPosRankSum=1.931;VQSLOD=4.7469;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,28:29:81.23:924,81,0	0/0:12,0:12:36.07:0,36,476	0/0:13,0:13:36.12:0,36,504	0/0:16,0:16:47.65:0,48,655	0/0:19,0:19:45.15:0,45,648	0/0:20,0:20:60.19:0,60,839	0/0:14,0:14:39.11:0,39,525	0/0:35,0:35:99:0,102,1425	0/0:21,0:21:60.20:0,60,860	1/1:3,23:26:72.17:800,72,0	1/1:1,26:27:75.13:838,75,0	0/0:15,0:15:45.14:0,45,629	0/0:12,0:12:36.12:0,36,517	0/0:22,0:22:63.18:0,63,871	0/0:10,0:10:30.10:0,30,432	0/0:10,0:10:27.09:0,27,388	0/0:28,2:30:47.06:0,47,1067	1/1:3,18:21:54.15:615,54,0	1/1:0,31:31:93.25:1052,93,0	1/1:0,23:23:65.92:701,66,0	1/1:2,27:29:75.21:856,75,0	0/0:24,0:24:66.22:0,66,950	0/0:20,0:20:60.17:0,60,825	0/0:14,0:14:42.13:0,42,585	1/1:0,18:18:51.15:582,51,0	1/1:3,19:22:60.16:677,60,0	1/1:1,19:20:51.15:582,51,0	1/1:0,23:23:63.18:719,63,0
chr10	43522770	.	A	AT	5917.51	PASS	AB=0.571;AC=21;AF=0.375;AN=56;BaseQRankSum=3.153;DP=390;FS=2.450;HRun=1;HaplotypeScore=46.1606;InbreedingCoeff=0.8745;MQ=51.96;MQ0=15;MQRankSum=1.437;QD=30.66;ReadPosRankSum=-0.006;VQSLOD=4.4164;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,22:22:57.17:839,57,0	0/0:6,0:5:14.99:0,15,173	0/0:2,0:2:6.02:0,6,78	0/0:8,0:3:8.92:0,9,93	0/0:20,0:20:47.89:0,48,630	0/0:16,0:15:42.09:0,42,522	0/0:11,0:11:26.96:0,27,279	0/0:20,0:18:54.11:0,54,647	0/0:13,0:12:26.80:0,27,334	1/1:1,13:14:35.86:460,36,0	1/1:5,16:19:42.14:619,42,0	0/0:6,0:5:15.04:0,15,180	0/0:6,0:6:15.05:0,15,192	0/0:11,0:9:17.96:0,18,197	0/0:5,0:5:15.05:0,15,194	0/0:7,0:7:15.05:0,15,193	0/0:30,0:29:81.22:0,81,1024	1/1:4,25:27:61.02:867,61,0	1/1:6,18:20:25.10:695,25,0	1/1:1,14:14:30.10:441,30,0	0/1:1,3:4:14.70:80,0,15	0/0:3,0:3:6.02:0,6,77	0/0:21,0:20:51.07:0,51,621	0/0:12,0:12:30.10:0,30,386	1/1:1,12:13:27.09:401,27,0	1/1:2,22:23:60.09:819,60,0	1/1:6,8:13:23.80:359,24,0	1/1:0,11:11:24.07:337,24,0
chr10	43523025	.	CAACAGCGCTTGGCGTAGAAACGAGTGG	C	15373.45	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=13.711;DP=506;FS=29.413;HRun=0;HaplotypeScore=355.4023;InbreedingCoeff=0.9709;MQ=74.69;MQ0=0;MQRankSum=-10.109;QD=94.90;ReadPosRankSum=2.946;VQSLOD=3.3485;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:13,14:27:27.15:1785,27,0	0/0:8,0:8:24.08:0,24,2700	0/0:14,0:14:39.13:0,39,2048	0/0:11,0:11:29.88:0,30,1322	0/0:13,0:13:39.13:0,39,3547	0/0:21,0:21:54.19:0,54,5525	0/0:29,0:29:78.27:0,78,8628	0/0:41,0:41:99:0,123,8841	0/0:14,0:14:42.14:0,42,5092	1/1:5,12:17:36.12:2169,36,0	1/1:4,8:12:21.07:1075,21,0	0/0:18,0:18:51.18:0,51,5769	0/0:26,0:26:74.81:0,75,7575	0/0:30,0:30:87.30:0,87,10468	0/0:19,0:19:54.19:0,54,6543	0/0:17,0:17:51.18:0,51,6035	0/0:29,0:29:84.27:0,84,7904	1/1:6,3:9:9.03:653,9,0	1/1:4,8:12:21.07:1524,21,0	1/1:5,9:14:24.08:1516,24,0	1/1:12,6:18:6.49:399,6,0	0/0:14,0:14:42.14:0,42,4920	0/0:15,0:15:42.14:0,42,5266	0/0:25,0:25:69.22:0,69,8037	1/1:2,9:11:24.08:1633,24,0	1/1:4,11:15:30.10:1612,30,0	1/1:9,13:21:30.10:2137,30,0	1/1:0,5:5:12.04:871,12,0
chr10	43523454	.	A	AT	11095.67	PASS	AB=0.571;AC=37;AF=0.661;AN=56;BaseQRankSum=-13.045;DP=615;FS=1.498;HRun=9;HaplotypeScore=58.9859;InbreedingCoeff=0.9372;MQ=80.68;MQ0=0;MQRankSum=-1.953;QD=26.93;ReadPosRankSum=0.925;VQSLOD=5.2402;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,48:52:99:1427,129,0	1/1:0,4:4:12.03:133,12,0	0/0:16,0:17:17.04:0,17,294	0/0:23,0:23:50.92:0,51,429	1/1:3,30:33:90.20:982,90,0	1/1:4,17:21:48.13:531,48,0	1/1:2,22:24:63.17:697,63,0	1/1:2,22:23:66.15:718,66,0	1/1:3,12:15:32.76:343,33,0	1/1:4,22:26:69.16:745,69,0	1/1:4,23:27:69.19:763,69,0	0/0:24,0:24:53.97:0,54,469	0/0:24,0:24:62.97:0,63,547	0/0:19,0:19:47.95:0,48,409	1/1:3,11:14:10.04:339,10,0	1/1:5,15:20:45.12:498,45,0	0/0:28,0:28:77.97:0,78,677	1/1:3,14:17:39.11:431,39,0	1/1:1,10:11:30.07:324,30,0	1/1:8,21:29:33.99:574,34,0	1/1:2,14:16:42.11:465,42,0	0/0:27,0:27:54.96:0,55,649	0/0:15,0:15:32.97:0,33,286	0/0:26,0:26:59.92:0,60,511	1/1:1,19:20:54.15:597,54,0	1/1:3,18:21:54.05:563,54,0	1/1:5,25:30:69.19:763,69,0	0/1:2,6:8:1.99:202,0,2
chr10	43523985	.	AATGG	A	1425.45	PASS	AB=0.887;AC=15;AF=0.288;AN=52;BaseQRankSum=3.428;DP=333;FS=7.674;HRun=0;HaplotypeScore=77.4061;InbreedingCoeff=0.1903;MQ=60.75;MQ0=11;MQRankSum=-4.382;QD=8.19;ReadPosRankSum=4.331;VQSLOD=1.0559;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:21:3.37:0,3,223	0/0:2,0:2:2.99:0,3,24	./.	0/0:34,0:14:13.37:0,13,165	./.	0/0:6,0:6:14.39:0,14,180	0/0:9,0:8:17.91:0,18,142	0/0:12,0:12:18.03:0,18,204	0/0:6,0:5:9:0,9,98	0/1:12,3:17:35.04:226,0,35	1/1:4,1:5:3.56:26,4,0	0/0:7,0:7:2.99:0,3,23	0/0:5,0:4:6:0,6,99	0/0:4,0:4:8.99:0,9,114	0/0:5,0:4:9:0,9,123	0/0:3,0:3:6.01:0,6,74	0/1:7,0:7:12.11:12,0,105	0/1:15,1:16:12.95:144,0,13	1/1:22,0:20:14.95:151,15,0	0/1:8,2:11:7.32:108,0,7	0/1:45,2:48:25.63:26,0,29	0/0:4,0:3:5.99:0,6,50	0/0:4,0:3:5.99:0,6,49	0/0:10,0:10:20.90:0,21,203	0/1:9,3:12:10.52:206,0,11	0/1:13,4:17:28.47:265,0,28	1/1:8,3:11:15.02:183,15,0	1/1:3,5:8:15.05:239,15,0
chr10	43523994	.	ATGGATGGATGGG	A	2997.65	PASS	AB=1.000;AC=15;AF=0.278;AN=54;BaseQRankSum=-0.711;DP=311;FS=13.031;HRun=0;HaplotypeScore=101.9897;InbreedingCoeff=0.2999;MQ=56.68;MQ0=27;MQRankSum=-3.330;QD=16.47;ReadPosRankSum=3.905;VQSLOD=0.6604;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:16:13.88:0,14,343	0/0:3,0:2:3:0,3,25	0/1:27,0:7:0:0,0,0	0/0:30,0:9:12.56:0,13,127	./.	0/0:5,0:5:14.62:0,15,296	0/0:9,0:8:17.95:0,18,215	0/0:14,0:11:17.95:0,18,148	0/0:4,0:3:9.02:0,9,123	0/1:20,0:18:83.41:446,0,83	1/1:6,0:5:5.30:55,5,0	0/0:4,0:4:6.01:0,6,119	0/0:3,0:2:6.01:0,6,173	0/0:4,0:4:9:0,9,205	0/0:7,0:6:3.24:0,3,292	0/0:3,0:2:5.99:0,6,50	0/0:6,0:6:11.95:0,12,222	0/1:14,0:14:20.34:342,0,20	1/1:8,9:14:26.83:308,27,0	1/1:10,0:10:15.01:241,15,0	0/1:40,0:39:1.15:132,0,1	0/0:3,0:2:6.01:0,6,74	0/0:6,0:4:9:0,9,121	0/0:8,0:8:20.93:0,21,199	0/1:12,0:11:39.80:333,0,40	0/1:19,0:18:99:562,0,173	0/1:10,0:10:38.30:322,0,38	1/1:7,0:7:15.05:419,15,0
chr10	43523998	.	A	ATGGG	1653.22	PASS	AB=0.949;AC=15;AF=0.288;AN=52;BaseQRankSum=2.335;DP=303;FS=5.278;HRun=0;HaplotypeScore=78.1166;InbreedingCoeff=0.1926;MQ=54.97;MQ0=38;MQRankSum=-4.764;QD=10.67;ReadPosRankSum=5.488;VQSLOD=1.8867;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:16:13.90:0,14,475	0/0:2,0:1:3:0,3,25	./.	0/0:32,0:8:13.30:0,13,137	./.	0/1:5,0:5:32.20:32,0,186	0/0:8,0:7:17.95:0,18,215	0/0:12,0:9:18.03:0,18,206	0/0:5,0:3:9.03:0,9,145	0/1:21,0:17:18.88:286,0,19	1/1:6,0:5:3.60:26,4,0	0/0:3,0:3:5.99:0,6,49	0/0:3,0:2:6.01:0,6,82	0/0:4,0:4:9:0,9,87	0/0:6,0:5:13.83:0,14,159	0/0:3,0:2:6.01:0,6,74	0/0:7,0:6:7.10:0,7,97	0/1:10,0:10:13.76:184,0,14	1/1:16,0:13:17.55:179,18,0	0/1:9,0:9:6.30:109,0,6	0/1:19,23:39:4.76:5,0,48	0/0:4,0:2:6.01:0,6,73	0/0:5,0:3:8.99:0,9,75	0/0:7,0:7:20.96:0,21,246	1/1:11,0:10:3.06:218,3,0	0/1:20,0:19:45.46:328,0,45	0/1:10,0:10:22.87:195,0,23	1/1:5,0:5:15.05:249,15,0
chr10	43524015	.	TG	T	831.17	PASS	AB=0.684;AC=6;AF=0.111;AN=54;BaseQRankSum=2.368;DP=282;FS=20.921;HRun=3;HaplotypeScore=64.2115;InbreedingCoeff=-0.1840;MQ=30.90;MQ0=53;MQRankSum=-4.302;QD=11.87;ReadPosRankSum=1.071;VQSLOD=0.7986;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:14:19.60:0,20,189	0/0:2,0:1:3.01:0,3,35	0/0:28,0:2:3.01:0,3,43	0/0:43,0:2:3.01:0,3,43	0/0:4,0:2:3.01:0,3,42	0/0:7,0:7:12.04:0,12,161	0/0:10,0:9:11.25:0,11,132	0/0:8,0:1:3.01:0,3,43	0/0:5,0:3:3.01:0,3,43	0/1:10,7:13:52.34:226,0,52	0/0:4,1:4:1.24:0,1,3	0/0:3,0:3:9.02:0,9,111	0/0:3,0:2:6.02:0,6,85	0/0:3,0:3:6.02:0,6,86	0/0:6,0:4:9.03:0,9,130	0/0:4,0:3:9.03:0,9,127	0/0:4,0:3:9.03:0,9,119	0/1:5,3:8:56.19:56,0,83	0/0:18,0:10:14.92:0,15,151	0/1:3,5:8:19.43:96,0,19	0/0:23,3:23:5.85:0,6,70	0/0:4,0:2:3.01:0,3,41	0/0:5,0:3:9.01:0,9,106	./.	0/1:7,3:9:59.47:90,0,59	0/1:8,10:17:84.33:322,0,84	0/1:4,5:9:47.16:158,0,47	0/0:6,0:6:14.65:0,15,89
chr10	43524118	.	TTGAA	T	2055.86	PASS	AB=0.933;AC=13;AF=0.241;AN=54;BaseQRankSum=7.868;DP=527;FS=0.601;HRun=0;HaplotypeScore=101.6497;InbreedingCoeff=0.8240;MQ=73.76;MQ0=2;MQRankSum=1.447;QD=16.06;ReadPosRankSum=-0.770;VQSLOD=2.8042;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:15,25:40:51.13:780,51,0	1/1:3,6:9:12.04:190,12,0	./.	0/0:16,0:12:6.02:0,6,127	0/0:14,0:14:24.08:0,24,564	1/1:7,7:14:18.06:285,18,0	1/1:10,5:15:12.68:234,13,0	1/1:16,8:24:24.07:353,24,0	1/1:2,10:12:24.08:380,24,0	0/0:35,0:35:72.24:0,72,1639	0/0:19,0:19:36.12:0,36,826	0/0:9,0:9:18.06:0,18,429	0/0:4,0:4:12.04:0,12,286	0/0:11,0:11:21.07:0,21,498	0/0:15,0:15:36.12:0,36,858	0/0:12,0:12:24.08:0,24,572	0/0:11,0:11:24.08:0,24,571	0/0:10,0:10:15.05:0,15,357	0/0:20,0:20:3.01:0,3,72	0/0:35,0:35:72.25:0,72,1707	0/0:41,0:41:63.13:0,63,1391	0/1:13,1:14:17.39:17,0,613	0/0:19,0:19:30.10:0,30,696	0/0:8,0:8:21.07:0,21,501	0/0:29,0:29:54.19:0,54,1247	0/0:34,0:34:57.20:0,57,1341	0/0:15,0:15:30.09:0,30,663	0/0:17,0:17:33.11:0,33,760
chr10	43524778	.	TA	T	1376.12	PASS	AB=0.773;AC=18;AF=0.346;AN=52;BaseQRankSum=5.367;DP=305;FS=4.541;HRun=13;HaplotypeScore=34.7156;InbreedingCoeff=0.6840;MQ=49.52;MQ0=12;MQRankSum=0.829;QD=9.90;ReadPosRankSum=2.288;VQSLOD=2.2709;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,38:44:86.36:629,86,0	1/1:2,1:3:2.98:22,3,0	0/0:4,1:2:6:0,6,53	0/1:5,0:2:4.24:4,0,24	1/1:3,4:5:8.95:66,9,0	1/1:6,10:16:1.97:150,2,0	1/1:2,8:10:21.97:143,22,0	1/1:16,14:25:40.85:290,41,0	0/1:1,5:6:8.64:73,0,9	0/0:17,0:17:32.92:0,33,299	0/0:11,0:10:21:0,21,191	0/0:14,1:13:2.04:0,2,158	0/0:9,0:9:18.02:0,18,171	0/0:3,0:3:9.01:0,9,88	1/1:1,6:8:13.86:88,14,0	1/1:0,5:6:13.97:93,14,0	0/0:17,1:16:11.15:0,11,264	0/0:14,0:14:27.01:0,27,248	0/0:10,0:10:15.02:0,15,146	0/0:11,1:11:12.49:0,12,118	./.	./.	0/0:4,0:3:6.01:0,6,58	0/0:6,0:6:15.02:0,15,146	0/0:8,0:7:11.92:0,12,97	0/0:13,0:14:20.85:0,21,179	0/0:9,0:8:18.01:0,18,165	0/0:9,0:7:18.01:0,18,164
chr10	43524891	.	T	TA	6762.76	PASS	AB=1.000;AC=39;AF=0.696;AN=56;BaseQRankSum=-7.577;DP=354;FS=3.902;HRun=7;HaplotypeScore=35.0548;InbreedingCoeff=0.8916;MQ=71.07;MQ0=0;MQRankSum=-2.476;QD=25.52;ReadPosRankSum=1.268;VQSLOD=4.8476;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,40:43:99:1319,111,0	1/1:2,4:6:12.04:145,12,0	0/0:8,0:9:20.48:0,20,198	0/1:13,0:11:0.71:1,0,119	1/1:1,7:8:17.97:198,18,0	1/1:2,12:14:33.10:398,33,0	1/1:1,11:12:24.07:290,24,0	1/1:3,23:26:66.20:796,66,0	1/1:1,8:9:18.06:217,18,0	1/1:4,7:11:18.06:217,18,0	1/1:0,9:9:27.08:326,27,0	0/0:7,0:7:18.03:0,18,174	0/0:10,0:10:18.03:0,18,174	0/0:7,0:7:21.02:0,21,197	1/1:1,7:8:15.05:181,15,0	1/1:2,1:3:3.01:36,3,0	0/0:28,0:28:69.11:0,69,666	1/1:2,12:14:30.09:362,30,0	1/1:4,8:12:24.01:260,24,0	1/1:1,7:8:21.06:254,21,0	1/1:1,13:14:36.11:435,36,0	0/0:3,0:3:9:0,9,81	0/0:3,0:3:9:0,9,81	0/0:22,0:22:57.09:0,57,550	1/1:3,11:14:27.08:326,27,0	1/1:2,11:13:33.09:388,33,0	1/1:1,11:12:30.09:358,30,0	1/1:3,13:16:21.06:254,21,0
chr10	43525062	.	A	AAAT	1556.81	PASS	AB=1.000;AC=4;AF=0.074;AN=54;BaseQRankSum=-6.792;DP=185;FS=0.662;HRun=0;HaplotypeScore=54.8148;InbreedingCoeff=0.1189;MQ=55.37;MQ0=2;MQRankSum=2.305;QD=29.37;ReadPosRankSum=-3.907;VQSLOD=2.6733;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:20.03:0,20,172	0/0:2,0:2:5.05:0,5,48	0/0:5,0:2:6.02:0,6,84	0/1:4,0:3:8.50:8,0,87	0/0:2,0:2:5.84:0,6,42	0/1:12,0:12:22.01:22,0,251	0/0:4,0:4:3.70:0,4,43	1/1:3,32:36:99:1634,102,0	0/0:2,0:2:3.48:0,3,43	0/0:1,0:1:3:0,3,26	0/0:3,0:3:5.22:0,5,33	0/0:2,0:2:6.02:0,6,90	0/0:7,0:7:18.06:0,18,289	0/0:5,0:5:15.04:0,15,214	0/0:3,0:3:4.87:0,5,18	0/0:1,0:1:3:0,3,28	0/0:21,0:21:60.20:0,60,939	0/0:15,0:15:34.23:0,34,320	0/0:10,0:10:30:0,30,276	0/0:1,0:1:3:0,3,26	./.	0/0:2,0:2:6.01:0,6,73	0/0:1,0:1:3.01:0,3,48	0/0:3,0:3:9.03:0,9,141	0/0:6,0:6:16.22:0,16,111	0/0:6,0:6:12.89:0,13,114	0/0:12,0:12:10.66:0,11,164	0/0:9,0:8:1.46:0,1,53
chr10	43525066	.	AAAT	A	2504.09	PASS	AB=1.000;AC=31;AF=0.596;AN=52;BaseQRankSum=5.946;DP=186;FS=0.000;HRun=0;HaplotypeScore=51.1539;InbreedingCoeff=0.4323;MQ=55.41;MQ0=2;MQRankSum=-4.433;QD=18.15;ReadPosRankSum=0.696;VQSLOD=3.1466;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,0:9:24.21:178,24,0	1/1:2,0:2:5.69:48,6,0	0/0:5,0:2:6.02:0,6,86	0/1:5,0:4:7.23:7,0,93	1/1:2,0:2:3:29,3,0	0/1:13,0:13:54.21:54,0,78	0/1:4,0:4:6.50:40,0,6	0/1:38,0:37:15.90:16,0,888	1/1:2,0:2:2.22:7,2,0	1/1:0,1:1:3.01:47,3,0	1/1:1,1:2:6.02:84,6,0	0/0:3,0:3:9.03:0,9,140	0/0:6,0:6:18.06:0,18,388	0/0:5,0:5:12.04:0,12,205	0/1:3,0:3:3.14:22,0,3	./.	0/0:22,0:22:66.21:0,66,1246	1/1:8,7:15:36.12:536,36,0	1/1:3,7:10:27.09:403,27,0	1/1:0,1:1:3.01:47,3,0	./.	0/0:2,0:2:6.02:0,6,103	0/0:1,0:1:3.01:0,3,66	0/0:3,0:3:9.03:0,9,169	1/1:3,3:6:15.05:217,15,0	1/1:2,3:5:15.05:209,15,0	1/1:5,7:12:36.09:503,36,0	1/1:4,4:7:15.05:232,15,0
chr10	43525069	.	T	TA	1584.23	PASS	AB=0.944;AC=31;AF=0.596;AN=52;BaseQRankSum=7.582;DP=189;FS=0.584;HRun=3;HaplotypeScore=49.4638;InbreedingCoeff=0.5722;MQ=54.84;MQ0=2;MQRankSum=-4.727;QD=15.09;ReadPosRankSum=1.346;VQSLOD=2.9745;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,8:10:26.97:383,27,0	1/1:3,0:3:8.28:58,8,0	0/0:4,0:2:6.02:0,6,74	0/1:6,0:4:7.24:7,0,54	1/1:2,0:2:3:29,3,0	1/1:8,5:13:33.10:314,33,0	1/1:2,1:3:8.82:97,9,0	0/0:37,0:36:96.69:0,97,1083	1/1:0,1:1:3.01:43,3,0	1/1:1,0:1:2.74:12,3,0	1/1:2,0:2:5.69:46,6,0	0/0:3,0:3:9.03:0,9,111	0/0:7,0:7:21.07:0,21,260	0/0:4,0:4:12.04:0,12,147	0/1:2,0:2:10.75:22,0,11	./.	0/0:22,0:22:66.19:0,66,805	1/1:14,1:15:34.41:199,34,0	0/1:8,2:10:0.86:131,0,1	1/1:1,0:1:2.74:12,3,0	./.	0/0:2,0:2:6.02:0,6,74	0/0:1,0:1:3.01:0,3,37	0/0:3,0:3:9.03:0,9,111	1/1:6,1:7:5.95:56,6,0	1/1:8,0:8:15.66:107,16,0	1/1:13,0:13:27.60:185,28,0	1/1:7,1:7:11.62:62,12,0
chr10	43525070	.	AATAAAT	A	3001.09	PASS	AB=1.000;AC=27;AF=0.519;AN=52;BaseQRankSum=6.871;DP=191;FS=0.556;HRun=0;HaplotypeScore=63.9653;InbreedingCoeff=0.4327;MQ=54.63;MQ0=2;MQRankSum=-6.423;QD=29.71;ReadPosRankSum=0.579;VQSLOD=3.0269;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,0:10:26.60:258,27,0	0/1:3,0:3:9.44:29,0,9	0/0:4,0:2:6.02:0,6,111	0/0:6,0:4:3.28:0,3,114	1/1:2,0:2:3:29,3,0	0/1:13,0:13:81.82:82,0,326	0/1:3,0:3:44.66:56,0,45	0/0:37,0:36:99:0,108,2508	1/1:1,0:1:2.98:21,3,0	1/1:1,0:1:3.01:61,3,0	1/1:3,0:3:6.02:88,6,0	0/0:3,0:3:9.03:0,9,258	0/0:7,0:7:21.07:0,21,714	0/0:4,0:4:12.04:0,12,286	0/1:2,0:2:21.88:22,0,65	./.	0/0:22,0:22:66.21:0,66,1903	1/1:14,1:15:40.17:633,40,0	0/1:11,0:11:0.39:567,0,0	1/1:1,0:1:3.01:61,3,0	./.	0/0:2,0:2:6.02:0,6,184	0/0:1,0:1:3.01:0,3,110	0/0:3,0:3:9.03:0,9,257	1/1:6,1:7:15.77:239,16,0	1/1:6,2:8:24.08:439,24,0	1/1:11,2:13:37.44:469,37,0	1/1:8,0:7:14.32:124,14,0
chr10	43525076	.	TAATAAATA	T	3435.13	PASS	AB=1.000;AC=21;AF=0.389;AN=54;BaseQRankSum=6.574;DP=196;FS=7.414;HRun=0;HaplotypeScore=73.9254;InbreedingCoeff=0.6449;MQ=57.26;MQ0=2;MQRankSum=-7.290;QD=41.89;ReadPosRankSum=-0.228;VQSLOD=1.9495;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:0,0:8:74.54:75,0,115	0/0:2,0:2:6.02:0,6,85	0/0:3,0:2:3.01:0,3,80	0/0:7,0:5:8.69:0,9,71	0/0:1,0:1:3.01:0,3,43	0/0:14,0:14:33.08:0,33,820	0/0:2,0:2:3.01:0,3,106	0/0:37,0:36:78.26:0,78,2027	0/0:3,0:3:6.02:0,6,86	1/1:1,1:2:6.02:115,6,0	1/1:1,1:3:6.02:103,6,0	0/0:3,0:3:9.03:0,9,288	0/0:9,0:9:27.09:0,27,867	0/0:2,0:2:6.02:0,6,247	0/0:3,0:3:9.03:0,9,141	./.	0/0:21,0:21:51.17:0,51,1658	1/1:7,6:15:36.12:744,36,0	1/1:1,7:13:36.11:772,36,0	1/1:1,1:2:6.02:113,6,0	1/1:0,0:1:3.01:30,3,0	0/0:3,0:3:9.03:0,9,251	0/0:1,0:1:3.01:0,3,127	0/0:3,0:3:9.03:0,9,298	1/1:4,2:7:18.05:312,18,0	1/1:4,3:10:30.10:542,30,0	1/1:9,3:14:27.09:516,27,0	1/1:6,1:6:6.02:113,6,0
chr10	43525083	.	TA	T	2140.53	PASS	AB=0.701;AC=19;AF=0.339;AN=56;BaseQRankSum=9.260;DP=215;FS=0.540;HRun=3;HaplotypeScore=48.9130;InbreedingCoeff=0.5106;MQ=56.78;MQ0=2;MQRankSum=-7.224;QD=23.78;ReadPosRankSum=1.861;VQSLOD=2.9537;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,11:11:26.90:291,27,0	0/0:2,0:2:6.02:0,6,82	0/0:2,0:1:3.01:0,3,43	0/0:7,0:5:14.88:0,15,172	0/0:1,0:1:3.01:0,3,43	0/0:12,0:12:29.63:0,30,423	0/0:4,0:4:7.73:0,8,124	0/0:40,0:39:19.76:0,20,1222	0/0:4,0:4:8.53:0,9,125	1/1:1,2:3:9.02:102,9,0	1/1:1,3:4:11.99:121,12,0	0/0:3,0:3:9.03:0,9,130	0/0:10,0:10:30.10:0,30,431	0/0:3,0:3:9.02:0,9,111	0/0:3,0:3:4.20:0,4,80	0/0:1,0:1:3.01:0,3,43	0/0:22,0:22:66.21:0,66,924	1/1:9,6:15:3.45:411,3,0	1/1:7,8:15:45.10:478,45,0	1/1:1,1:2:6.01:65,6,0	1/1:0,1:1:3.01:30,3,0	0/0:4,0:4:12.04:0,12,173	0/0:1,0:1:3.01:0,3,43	0/0:6,0:6:18.01:0,18,219	0/1:3,3:6:41.91:136,0,42	1/1:3,7:10:30.07:327,30,0	0/1:8,5:13:10.93:272,0,11	0/1:6,4:9:24.71:89,0,25
chr10	43526775	.	AT	A	297.82	PASS	AB=0.920;AC=6;AF=0.107;AN=56;BaseQRankSum=3.837;DP=429;FS=2.370;HRun=12;HaplotypeScore=47.4261;InbreedingCoeff=0.3292;MQ=70.55;MQ0=1;MQRankSum=-0.810;QD=3.92;ReadPosRankSum=-2.325;VQSLOD=-0.3425;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:66.54:0,67,837	0/0:2,0:2:6.01:0,6,61	0/0:10,0:10:20.94:0,21,198	0/1:7,0:7:4.16:4,0,80	0/0:9,0:9:21.03:0,21,207	0/0:15,0:15:36.06:0,36,360	0/0:19,1:22:36.50:0,36,499	1/1:4,17:22:50.75:390,51,0	0/0:22,0:22:52.35:0,52,520	0/0:18,0:19:29.90:0,30,289	0/0:9,0:9:12.02:0,12,122	0/0:18,1:19:21.80:0,22,383	0/0:9,0:9:24.03:0,24,236	0/0:14,1:15:15.83:0,16,336	0/0:9,0:10:23.88:0,24,227	0/0:9,0:9:21.04:0,21,213	0/1:24,4:28:0.60:1,0,527	0/0:20,0:19:18.43:0,18,334	0/0:13,0:13:36.06:0,36,360	0/1:10,1:11:2.20:2,0,162	0/0:34,0:35:32.71:0,33,636	0/0:12,0:12:33.05:0,33,328	0/0:5,0:5:9.02:0,9,91	0/0:24,1:24:36.85:0,37,543	0/1:7,1:8:5.20:5,0,134	0/0:11,0:12:17.18:0,17,207	0/0:14,0:14:30.03:0,30,295	0/0:11,0:11:30.01:0,30,279
chr10	43527097	.	G	GTC	2823.89	PASS	AB=0.565;AC=19;AF=0.339;AN=56;BaseQRankSum=8.951;DP=273;FS=17.743;HRun=0;HaplotypeScore=36.0409;InbreedingCoeff=0.6827;MQ=45.51;MQ0=17;MQRankSum=-2.464;QD=36.67;ReadPosRankSum=1.162;VQSLOD=3.8405;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:30.10:0,30,459	0/0:7,0:7:18.02:0,18,249	0/0:15,0:4:12.04:0,12,184	0/0:15,0:1:3.01:0,3,46	0/0:7,0:6:15.05:0,15,229	0/0:11,0:9:15.05:0,15,229	0/0:9,0:4:3.01:0,3,46	0/0:29,0:28:81.27:0,81,1236	0/0:7,0:6:15.05:0,15,229	1/1:1,4:5:12.04:232,12,0	1/1:0,3:3:9.03:173,9,0	0/0:6,0:6:11.93:0,12,184	0/0:9,0:9:18.06:0,18,275	0/0:6,0:6:12.04:0,12,184	0/0:5,0:5:3.01:0,3,46	0/0:5,0:5:9.03:0,9,138	0/0:32,0:32:63.21:0,63,964	0/1:3,10:10:27.40:272,0,27	1/1:2,8:8:24.08:463,24,0	1/1:0,2:2:3.01:58,3,0	1/1:0,1:1:3.01:58,3,0	0/0:3,0:3:3.01:0,3,46	0/0:6,0:6:11.99:0,12,157	0/0:5,0:5:6.02:0,6,92	1/1:0,6:6:15.05:269,15,0	1/1:3,9:11:33.07:563,33,0	1/1:3,4:7:6.02:116,6,0	1/1:3,15:15:42.14:810,42,0
chr10	43527231	.	C	CT	1791.25	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=-3.293;DP=453;FS=0.000;HRun=7;HaplotypeScore=57.6936;InbreedingCoeff=0.8550;MQ=61.74;MQ0=24;MQRankSum=-5.286;QD=13.78;ReadPosRankSum=0.480;VQSLOD=2.7374;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,25:28:51.15:608,51,0	1/1:1,6:7:15.05:181,15,0	0/1:38,0:17:5.84:6,0,194	0/0:34,0:17:5.61:0,6,169	0/0:11,0:8:21.03:0,21,203	1/1:7,9:14:24.04:271,24,0	1/1:3,18:20:30.09:361,30,0	0/0:40,0:39:68.43:0,68,838	1/1:3,14:16:47.96:539,48,0	0/0:6,0:6:17.98:0,18,161	0/0:5,0:5:15.01:0,15,140	0/0:13,0:12:26.98:0,27,249	0/0:12,0:12:30.04:0,30,286	0/0:7,0:6:15.02:0,15,145	0/0:10,0:8:24.04:0,24,232	0/0:8,0:8:18.03:0,18,174	0/0:27,0:26:32.14:0,32,470	0/0:20,0:19:42:0,42,389	0/0:21,0:17:48.06:0,48,457	0/0:6,0:4:12.02:0,12,116	0/0:27,0:25:72.11:0,72,694	0/0:10,0:10:24.03:0,24,232	0/0:5,0:4:12.01:0,12,112	0/0:17,0:17:39.06:0,39,377	0/0:12,0:10:24.03:0,24,231	0/0:15,0:12:30.02:0,30,283	0/0:8,0:7:18.03:0,18,173	0/0:9,0:7:21.03:0,21,203
chr10	43527255	.	G	GT	583.37	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-6.332;DP=430;FS=4.442;HRun=8;HaplotypeScore=61.7902;InbreedingCoeff=0.6743;MQ=58.14;MQ0=22;MQRankSum=-0.914;QD=18.82;ReadPosRankSum=-2.922;VQSLOD=2.8511;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:24:42.02:0,42,384	0/0:6,0:6:15.01:0,15,137	0/0:32,0:12:1.02:0,1,60	0/0:33,0:12:7.80:0,8,76	0/0:14,0:13:35.99:0,36,320	0/0:10,0:10:24.01:0,24,219	0/0:19,0:18:32.96:0,33,293	1/1:8,23:28:14.29:671,14,0	0/0:17,0:16:35.75:0,36,305	0/0:8,0:8:18.01:0,18,165	0/0:5,0:5:15.01:0,15,137	0/0:11,0:11:30.02:0,30,275	0/0:11,0:11:24:0,24,219	0/0:8,0:8:15.01:0,15,137	0/0:12,0:12:21.01:0,21,192	0/0:10,0:10:20.92:0,21,175	0/0:21,0:21:47.97:0,48,429	0/0:21,0:20:48.03:0,48,439	0/0:15,0:14:39.02:0,39,357	0/0:5,0:5:15.01:0,15,137	0/0:34,0:32:84.01:0,84,760	0/0:9,0:9:24.01:0,24,220	0/0:7,0:7:15.01:0,15,137	0/0:22,0:22:60.01:0,60,544	0/0:6,0:6:15.01:0,15,137	0/0:14,0:13:33.02:0,33,302	0/0:8,0:8:18.48:0,18,166	0/0:12,0:12:33.49:0,33,303
chr10	43527314	.	GGCAGGC	G	2560.50	PASS	AC=10;AF=0.192;AN=52;BaseQRankSum=6.714;DP=413;FS=6.741;HRun=0;HaplotypeScore=79.7468;InbreedingCoeff=0.8752;MQ=46.48;MQ0=56;MQRankSum=-8.938;QD=40.64;ReadPosRankSum=-0.576;VQSLOD=2.4185;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,10:12:18.06:432,18,0	1/1:0,2:2:6.02:144,6,0	./.	./.	0/0:11,0:10:30.10:0,30,1022	1/1:2,14:14:27.09:649,27,0	1/1:2,9:10:1.07:412,1,0	0/0:12,0:5:9.03:0,9,323	1/1:1,17:15:45.15:1079,45,0	0/0:12,0:12:33.11:0,33,1108	0/0:10,0:10:27.09:0,27,972	0/0:10,0:10:23.67:0,24,853	0/0:13,0:13:36.12:0,36,1210	0/0:12,0:12:33.11:0,33,1187	0/0:20,0:19:48.16:0,48,1727	0/0:13,0:13:36.12:0,36,1297	0/0:21,0:21:57.20:0,57,2022	0/0:19,0:18:48.14:0,48,1595	0/0:14,0:8:21.07:0,21,598	0/0:4,0:3:9.03:0,9,289	0/0:32,0:27:75.24:0,75,2362	0/0:7,0:7:18.06:0,18,596	0/0:8,0:8:21.07:0,21,645	0/0:37,0:37:99:0,102,3548	0/0:5,0:5:12.04:0,12,432	0/0:16,0:16:48.16:0,48,1701	0/0:13,0:13:27.09:0,27,970	0/0:8,0:8:24.08:0,24,865
chr10	43527374	.	A	ATG	653.63	PASS	AB=1.000;AC=21;AF=0.438;AN=48;BaseQRankSum=5.575;DP=395;FS=10.086;HRun=0;HaplotypeScore=92.9299;InbreedingCoeff=0.6429;MQ=56.88;MQ0=4;MQRankSum=-3.475;QD=4.27;ReadPosRankSum=-3.011;VQSLOD=0.8226;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:12:2.84:0,3,14	0/0:4,0:4:8.52:0,9,42	./.	./.	0/1:15,0:13:0:0,0,0	0/0:17,0:13:8.59:0,9,43	0/0:7,0:8:5.96:0,6,43	1/1:23,0:21:10.49:56,10,0	0/0:21,0:18:20.37:0,20,122	1/1:17,0:15:32.89:275,33,0	0/1:8,0:8:0:0,0,0	0/0:13,0:13:23.59:0,24,210	./.	0/0:12,0:12:21.01:0,21,215	1/1:18,0:18:1.55:4,2,0	1/1:13,0:13:2.74:12,3,0	0/0:30,0:32:59.92:0,60,612	1/1:11,0:11:14.90:110,15,0	1/1:9,2:11:11.96:133,12,0	1/1:2,4:6:5.95:63,6,0	0/0:23,0:19:4.78:0,5,25	0/0:8,0:9:14.82:0,15,124	0/0:6,0:7:14.86:0,15,139	0/0:40,0:41:68.28:0,68,672	./.	1/1:14,0:14:11.35:97,11,0	1/1:6,6:12:3.01:39,3,0	0/1:5,0:5:11.99:27,0,12
chr10	43527380	.	G	GTGTGTG	1109.44	PASS	AB=1.000;AC=21;AF=0.438;AN=48;BaseQRankSum=3.505;DP=379;FS=8.036;HRun=0;HaplotypeScore=113.6315;InbreedingCoeff=0.6366;MQ=53.87;MQ0=4;MQRankSum=-2.836;QD=7.81;ReadPosRankSum=-3.701;VQSLOD=-0.1577;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:11:3.01:0,3,42	0/0:5,0:5:8.98:0,9,126	./.	./.	0/1:13,0:11:0:0,0,0	0/0:15,0:12:9.03:0,9,127	0/0:11,0:11:5.85:0,6,109	1/1:21,0:19:8.76:88,9,0	0/0:18,0:15:21.07:0,21,313	1/1:15,0:13:19.10:469,19,0	0/1:8,0:8:0:0,0,0	0/0:11,0:11:23.70:0,24,436	./.	0/0:13,0:13:24.08:0,24,468	1/1:16,0:16:2.74:12,3,0	1/1:10,0:10:2.97:20,3,0	0/0:34,0:34:59.83:0,60,1119	1/1:11,0:11:5.49:155,5,0	1/1:11,0:11:11.96:142,12,0	1/1:7,0:7:5.81:54,6,0	0/0:24,0:19:6.02:0,6,91	0/0:8,0:8:15.05:0,15,274	0/0:7,0:7:15.05:0,15,287	0/0:41,0:41:69.23:0,69,1288	./.	1/1:8,6:14:23.36:251,23,0	1/1:13,0:13:3.41:19,3,0	0/1:3,0:3:11.97:64,0,12
chr10	43527387	.	T	TGTGTGT	756.19	PASS	AB=1.000;AC=21;AF=0.438;AN=48;BaseQRankSum=2.501;DP=377;FS=4.227;HRun=0;HaplotypeScore=108.4114;InbreedingCoeff=0.6166;MQ=52.98;MQ0=7;MQRankSum=-2.697;QD=5.52;ReadPosRankSum=-3.128;VQSLOD=1.3963;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:11:3.01:0,3,42	0/0:7,0:7:8.36:0,8,125	./.	./.	0/1:12,0:10:0:0,0,0	0/0:14,0:11:9.03:0,9,127	0/0:11,0:11:6.02:0,6,110	1/1:19,0:17:6.60:52,7,0	0/0:16,0:14:21.07:0,21,313	1/1:17,0:14:12.11:293,12,0	0/1:8,0:8:0:0,0,0	0/0:11,0:11:23.70:0,24,436	./.	0/0:13,0:13:24.08:0,24,468	1/1:14,0:14:2.74:12,3,0	1/1:9,0:9:2.97:20,3,0	0/0:33,0:33:59.83:0,60,1119	1/1:10,0:10:5.49:155,5,0	1/1:12,0:11:8.14:77,8,0	1/1:7,0:7:5.81:54,6,0	0/0:18,7:19:6.02:0,6,90	0/0:7,0:7:15.05:0,15,274	0/0:7,0:7:15.05:0,15,287	0/0:47,0:47:69.23:0,69,1288	./.	1/1:14,0:14:18.86:213,19,0	1/1:11,0:12:3.41:19,3,0	0/1:3,0:3:14.98:23,0,15
chr10	43527406	.	GTGCGCGCGCGCGCA	G	1599.64	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=3.380;DP=339;FS=1.923;HRun=0;HaplotypeScore=130.5397;InbreedingCoeff=0.3943;MQ=57.29;MQ0=6;MQRankSum=-4.353;QD=19.04;ReadPosRankSum=2.139;VQSLOD=2.6427;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:0,8:8:3.01:132,3,0	1/1:2,4:6:8.71:375,9,0	0/0:4,0:3:3.01:0,3,46	0/0:7,0:3:3.01:0,3,36	0/1:12,0:10:0:0,0,0	1/1:5,3:6:9.03:374,9,0	0/1:7,0:7:20.72:167,0,21	0/1:11,0:9:63.13:63,0,107	1/1:9,4:12:21.02:598,21,0	0/0:15,0:12:33:0,33,837	0/0:7,0:7:0.47:0,0,1	0/0:12,0:12:10.13:0,10,1184	0/0:1,0:1:3.01:0,3,204	0/0:12,0:12:36.12:0,36,1847	0/1:12,0:12:14.97:29,0,15	0/1:7,0:7:14.91:15,0,19	0/0:31,0:31:86.77:0,87,5010	0/0:12,0:12:36.12:0,36,1220	0/0:14,0:12:27.50:0,27,964	0/0:8,0:8:8.52:0,9,359	0/0:25,0:20:21.06:0,21,820	0/0:7,0:7:18.06:0,18,907	0/0:8,0:8:21.07:0,21,1159	0/0:50,0:50:99:0,141,7132	0/0:8,0:8:6.02:0,6,341	0/0:12,0:12:33.11:0,33,1604	0/0:16,0:16:27.52:0,28,1204	0/0:6,0:6:18.05:0,18,534
chr10	43527407	.	T	TGTGTGCGCGC	3111.42	PASS	AB=0.911;AC=18;AF=0.321;AN=56;BaseQRankSum=0.273;DP=348;FS=1.199;HRun=0;HaplotypeScore=122.6478;InbreedingCoeff=0.4471;MQ=57.01;MQ0=5;MQRankSum=-3.006;QD=20.47;ReadPosRankSum=-4.193;VQSLOD=1.3909;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:8:3.01:0,3,70	0/0:6,0:6:9.03:0,9,186	0/0:4,0:3:0:0,0,0	0/1:8,0:3:0:0,0,0	0/0:10,0:8:0.24:0,0,0	0/0:8,0:6:9.03:0,9,205	0/0:7,0:7:9.50:0,9,124	0/1:7,0:8:24.66:176,0,25	0/0:12,0:12:24.06:0,24,416	1/1:16,0:14:2.65:412,3,0	0/1:2,10:12:0:0,0,0	0/0:13,0:13:29.74:0,30,567	0/0:1,0:1:3.01:0,3,64	0/0:12,0:12:36.09:0,36,663	0/0:11,0:11:1.82:0,2,5	0/0:7,0:7:3:0,3,26	0/0:31,0:31:89.85:0,90,2217	1/1:13,1:14:26.88:706,27,0	1/1:15,0:13:24.43:429,24,0	0/1:9,0:9:14.05:136,0,14	0/1:22,0:19:45.38:237,0,45	0/0:7,0:7:18.06:0,18,385	0/0:8,0:8:21.07:0,21,430	0/0:51,0:51:99:0,132,3000	1/1:9,0:9:6.01:75,6,0	1/1:11,0:12:30.10:554,30,0	1/1:16,0:16:27.44:362,27,0	0/1:6,0:6:5.94:189,0,6
chr10	43527408	.	GCGCGCGCGCGCA	G	1245.78	PASS	AB=0.600;AC=17;AF=0.304;AN=56;BaseQRankSum=5.893;DP=323;FS=0.000;HRun=0;HaplotypeScore=117.6487;InbreedingCoeff=0.6947;MQ=60.25;MQ0=5;MQRankSum=-5.242;QD=22.25;ReadPosRankSum=3.223;VQSLOD=2.3688;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:8,0:8:3.01:98,3,0	1/1:6,0:6:9.03:294,9,0	0/0:4,0:3:3.01:0,3,46	0/0:9,0:4:5.95:0,6,53	0/1:1,0:3:0:0,0,0	1/1:5,1:4:9.03:293,9,0	1/1:3,4:7:6.47:143,6,0	1/1:3,0:3:3.01:84,3,0	1/1:12,0:12:11.87:391,12,0	0/0:17,0:15:26.82:0,27,899	0/0:11,0:11:6.49:0,6,342	0/0:12,0:13:23.81:0,24,1119	0/0:1,0:1:3.01:0,3,181	0/0:12,0:12:33.11:0,33,1525	1/1:5,0:7:3.01:61,3,0	1/1:4,0:4:3.01:47,3,0	0/0:31,0:31:83.79:0,84,4451	0/0:15,0:15:42.13:0,42,1511	0/0:15,0:13:24.06:0,24,1045	0/0:9,0:9:8.32:0,8,485	0/0:23,0:18:15.05:0,15,743	0/0:7,0:7:15.05:0,15,756	0/0:8,0:8:21.07:0,21,992	0/0:50,0:50:99:0,132,6628	0/0:9,0:9:9.03:0,9,512	0/0:12,0:12:33.11:0,33,1473	0/0:15,0:15:24.08:0,24,1125	0/0:6,0:6:12.04:0,12,466
chr10	43527410	.	GCGCGCGCGCACGCGCGCA	G	613.60	PASS	AB=1.000;AC=16;AF=0.286;AN=56;BaseQRankSum=6.449;DP=320;FS=3.192;HRun=0;HaplotypeScore=149.8240;InbreedingCoeff=0.4289;MQ=60.74;MQ0=5;MQRankSum=-4.815;QD=9.59;ReadPosRankSum=2.063;VQSLOD=2.4184;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:8,0:8:3:27,3,0	1/1:6,0:6:9.49:147,9,0	0/0:5,0:4:9.03:0,9,288	0/0:10,0:4:6:0,6,67	0/0:2,1:3:0.47:0,0,1	1/1:6,0:4:9.03:168,9,0	0/1:6,0:6:27.80:28,0,60	1/1:3,0:3:8.97:194,9,0	0/1:11,0:11:53:100,0,53	0/0:17,0:15:31.36:0,31,1414	0/0:12,0:12:9.03:0,9,753	0/0:13,0:13:32.78:0,33,1952	0/0:1,0:1:3.01:0,3,268	0/0:12,0:12:36.12:0,36,2337	1/1:7,0:7:3.01:53,3,0	1/1:1,3:4:3.01:40,3,0	0/0:30,0:30:87.21:0,87,6856	0/0:15,0:15:41.63:0,42,2517	0/0:14,0:12:3.15:0,3,1551	0/1:8,0:8:11.49:11,0,712	0/0:22,0:18:27.08:0,27,1620	0/0:8,0:8:21.07:0,21,1420	0/0:9,0:9:24.08:0,24,1742	0/0:50,0:50:99:0,138,10161	0/0:9,0:9:9.03:0,9,776	0/0:12,0:12:33.11:0,33,2237	0/0:14,0:14:24.07:0,24,1779	0/1:5,0:5:8.89:9,0,716
chr10	43527418	.	GCACGCGCGCA	G	856.01	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=6.613;DP=308;FS=3.576;HRun=0;HaplotypeScore=106.1287;InbreedingCoeff=0.7605;MQ=66.31;MQ0=3;MQRankSum=-5.763;QD=18.61;ReadPosRankSum=2.077;VQSLOD=2.4507;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:8,0:8:3.01:55,3,0	1/1:5,0:5:9.03:166,9,0	0/0:7,0:6:15.05:0,15,357	0/0:10,0:5:8.39:0,8,109	0/1:3,0:3:0:0,0,0	1/1:6,0:5:9.03:166,9,0	1/1:5,0:5:3.95:74,4,0	1/1:3,0:3:5.99:96,6,0	1/1:5,0:5:15.05:292,15,0	0/0:14,0:13:29.39:0,29,946	0/0:12,0:12:15.05:0,15,643	0/0:12,0:12:29.83:0,30,1343	0/0:2,0:2:6.02:0,6,239	0/0:12,0:12:36.11:0,36,1316	1/1:3,4:7:3.01:104,3,0	1/1:3,0:4:3.01:72,3,0	0/0:29,0:29:87.28:0,87,4166	0/0:18,0:18:51.14:0,51,1665	0/0:13,0:12:27.09:0,27,1097	0/0:8,0:8:8.73:0,9,431	0/0:16,0:15:27.09:0,27,1191	0/0:6,0:7:18.06:0,18,790	0/0:11,0:11:30.10:0,30,1156	0/0:46,0:46:99:0,135,6199	0/0:9,0:9:12.04:0,12,583	0/0:13,0:13:33.11:0,33,1365	0/0:17,0:17:30.10:0,30,1197	0/0:5,0:5:12.04:0,12,431
chr10	43527562	.	GT	G	332.48	PASS	AB=0.757;AC=5;AF=0.089;AN=56;BaseQRankSum=-2.569;DP=477;FS=11.918;HRun=14;HaplotypeScore=77.5447;InbreedingCoeff=0.4264;MQ=64.87;MQ0=1;MQRankSum=2.781;QD=4.89;ReadPosRankSum=-0.178;VQSLOD=0.8931;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:34:80.07:0,80,716	0/0:7,0:7:17.96:0,18,157	0/0:30,0:15:20.54:0,21,159	0/0:13,0:8:3.82:0,4,17	1/1:8,12:20:26.82:252,27,0	0/0:14,0:14:30.01:0,30,268	0/1:17,2:21:0.57:1,0,231	0/0:13,0:17:38.51:0,39,309	0/0:13,0:13:20.37:0,20,186	0/0:22,0:23:53.71:0,54,222	0/0:16,0:16:35.02:0,35,147	0/0:7,0:7:15.01:0,15,136	0/0:6,0:6:8.80:0,9,61	0/0:15,0:16:44.81:0,45,384	0/1:7,8:15:20.12:99,0,20	0/1:7,3:12:3.28:96,0,3	0/0:14,1:15:15.46:0,15,285	0/0:28,0:28:51.59:0,52,209	0/0:21,0:21:27.84:0,28,128	0/0:8,0:8:16.14:0,16,66	0/0:16,0:17:32.76:0,33,134	0/0:11,0:12:26.84:0,27,229	0/0:13,1:15:9.08:0,9,190	0/0:17,1:19:44.82:0,45,383	0/0:21,0:21:35.21:0,35,149	0/0:23,0:23:42.99:0,43,177	0/0:22,0:25:44.95:0,45,191	0/0:8,0:8:16.07:0,16,66
chr10	43527573	.	T	TG	5029.87	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-10.884;DP=474;FS=4.678;HRun=0;HaplotypeScore=65.1862;InbreedingCoeff=0.9851;MQ=66.19;MQ0=1;MQRankSum=1.087;QD=26.90;ReadPosRankSum=6.437;VQSLOD=5.3265;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:93.23:0,93,1189	0/0:7,0:7:20.98:0,21,247	0/0:28,0:15:29.58:0,30,270	0/0:16,0:9:15.37:0,15,128	0/0:22,0:22:62.38:0,62,444	0/0:14,0:14:41.67:0,42,468	0/0:18,0:18:37.19:0,37,447	0/0:18,0:18:42.98:0,43,494	0/0:15,0:15:35.40:0,35,367	1/1:2,22:24:66.06:786,66,0	1/1:4,12:16:38.86:477,39,0	0/0:7,0:7:21.05:0,21,248	0/0:4,0:4:9.02:0,9,110	0/0:16,0:16:45.87:0,46,525	0/0:12,0:12:29.83:0,30,229	0/0:10,0:10:28.32:0,28,209	0/0:16,0:16:45.01:0,45,523	1/1:1,25:28:60:731,60,0	1/1:2,14:17:32.22:455,32,0	1/1:0,6:6:18.06:226,18,0	1/1:3,15:18:37.85:456,38,0	0/0:14,0:14:33.93:0,34,378	0/0:14,0:14:39.41:0,39,402	0/0:18,0:18:45.48:0,45,539	1/1:3,17:21:33.54:416,34,0	1/1:2,22:24:59.91:681,60,0	1/1:3,23:26:52.19:576,52,0	1/1:0,7:7:18.06:227,18,0
chr10	43528818	.	CG	C	2388.68	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=7.768;DP=600;FS=11.829;HRun=1;HaplotypeScore=61.0120;InbreedingCoeff=0.9940;MQ=101.56;MQ0=0;MQRankSum=-2.281;QD=31.43;ReadPosRankSum=1.426;VQSLOD=2.0559;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,105,1495	0/0:12,0:12:30.10:0,30,477	0/0:31,0:31:93.15:0,93,1361	0/0:38,0:39:79.96:0,80,1501	1/1:0,14:14:23.97:289,24,0	0/0:11,0:11:30.09:0,30,450	0/0:33,0:33:99:0,99,1578	1/1:0,21:21:60.14:750,60,0	0/0:28,0:28:81.22:0,81,1226	0/0:27,0:27:81.20:0,81,1130	0/0:8,0:8:24.06:0,24,354	0/0:28,0:28:84.21:0,84,1254	0/0:16,0:16:48.10:0,48,669	0/0:18,0:18:54.13:0,54,804	1/1:0,21:21:48.16:671,48,0	1/1:0,20:20:60.20:839,60,0	0/0:22,0:22:63.20:0,63,976	0/0:14,0:14:42.08:0,42,616	0/0:27,0:27:81.13:0,81,1137	0/0:13,0:13:36.12:0,36,571	0/0:42,0:42:99:0,123,1906	0/0:17,0:17:48.13:0,48,694	0/0:6,0:6:15.03:0,15,212	0/0:20,0:20:60.20:0,60,957	0/0:22,0:22:63.17:0,63,926	0/0:18,0:18:51.15:0,51,765	0/0:24,0:24:72.17:0,72,1096	0/0:10,0:10:30.10:0,30,477
chr10	43530038	.	T	TTTCTCC	9225.31	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-3.262;DP=645;FS=7.293;HRun=0;HaplotypeScore=136.5604;InbreedingCoeff=0.9583;MQ=71.10;MQ0=3;MQRankSum=-9.209;QD=31.17;ReadPosRankSum=-4.519;VQSLOD=2.9854;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:96.22:0,96,1889	0/0:15,0:15:6.08:0,6,339	0/0:25,0:21:15.04:0,15,231	0/0:24,0:19:17.96:0,18,249	1/1:12,0:26:32.93:533,33,0	0/0:28,0:28:69.20:0,69,1384	0/0:31,0:31:60.14:0,60,1087	1/1:25,0:24:39.07:819,39,0	0/0:32,0:32:75.15:0,75,1359	1/1:6,7:16:33:684,33,0	1/1:8,7:16:12.04:339,12,0	0/0:21,0:21:48.11:0,48,875	0/0:26,0:26:57.17:0,57,1065	0/0:14,0:14:30.10:0,30,625	1/1:10,0:22:21.07:522,21,0	1/1:10,0:21:24.08:548,24,0	0/0:27,0:27:57.18:0,57,1150	1/1:15,3:18:23.96:438,24,0	1/1:12,5:18:20.97:387,21,0	1/1:9,11:21:33.06:737,33,0	1/1:10,11:23:12.04:348,12,0	0/0:16,0:16:41.86:0,42,713	0/0:11,0:11:27.08:0,27,514	0/0:34,0:33:75.24:0,75,1493	1/1:7,5:13:15.05:479,15,0	1/1:12,22:37:12.55:1943,13,0	1/1:8,14:23:36.12:1154,36,0	1/1:5,11:17:9.03:295,9,0
chr10	43530314	.	GCAC	G	1533.97	PASS	AB=0.919;AC=17;AF=0.304;AN=56;BaseQRankSum=11.581;DP=431;FS=32.121;HRun=0;HaplotypeScore=80.5403;InbreedingCoeff=-0.1202;MQ=62.00;MQ0=0;MQRankSum=-2.954;QD=5.56;ReadPosRankSum=7.268;VQSLOD=-0.2453;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:31,7:38:96.14:270,0,96	0/1:10,0:10:41.08:41,0,54	0/0:10,0:9:20.62:0,21,286	0/0:21,0:20:42.13:0,42,542	0/0:11,0:11:26.47:0,26,275	0/1:13,0:13:46.48:46,0,75	0/1:22,1:23:99:111,0,136	0/0:8,0:8:9.27:0,9,250	1/1:11,3:14:22.96:168,23,0	0/1:18,1:19:86.34:86,0,230	0/1:12,2:14:32.75:59,0,33	0/0:10,0:10:23.80:0,24,301	0/0:6,0:6:11.95:0,12,143	0/0:13,0:13:32.79:0,33,420	0/0:8,0:8:21.31:0,21,195	0/0:13,0:13:32.04:0,32,407	0/0:24,0:24:56.76:0,57,812	0/1:17,2:19:12.94:153,0,13	0/1:15,1:16:43.68:117,0,44	0/1:13,3:16:54.83:106,0,55	0/1:27,2:29:99:160,0,147	0/0:8,0:8:11.57:0,12,151	0/0:8,0:8:20.97:0,21,273	0/0:14,0:14:32.70:0,33,442	0/1:16,3:19:61.25:61,0,63	0/1:18,2:20:53.13:194,0,53	0/1:21,2:23:88.59:89,0,182	1/1:3,0:3:8.51:42,9,0
chr10	43531815	.	TGC	T	2703.40	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=5.656;DP=477;FS=7.648;HRun=0;HaplotypeScore=68.6796;InbreedingCoeff=0.9937;MQ=88.79;MQ0=0;MQRankSum=-2.830;QD=39.76;ReadPosRankSum=0.266;VQSLOD=4.7313;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,111,2141	0/0:5,0:5:15.02:0,15,251	0/0:13,0:13:39.10:0,39,714	0/0:26,0:26:68.07:0,68,1206	1/1:1,20:21:48.16:727,48,0	0/0:25,0:25:60.21:0,60,1158	0/0:15,0:15:42.12:0,42,773	1/1:1,23:24:72.24:1081,72,0	0/0:17,0:17:51.17:0,51,983	0/0:17,0:17:48.16:0,48,917	0/0:12,0:12:33.11:0,33,613	0/0:11,0:11:27.09:0,27,519	0/0:7,0:7:21.07:0,21,400	0/0:13,0:13:39.13:0,39,752	1/1:0,13:13:39.13:597,39,0	1/1:0,10:10:30.10:459,30,0	0/0:26,0:26:72.20:0,72,1340	0/0:17,0:16:45.15:0,45,856	0/0:16,0:16:48.16:0,48,921	0/0:17,0:17:51.16:0,51,925	0/0:15,0:15:42.14:0,42,778	0/0:20,0:20:57.14:0,57,1020	0/0:10,0:10:30.10:0,30,576	0/0:17,0:17:48.16:0,48,924	0/0:15,0:15:39.13:0,39,737	0/0:23,0:23:69.24:0,69,1310	0/0:22,0:21:63.22:0,63,1187	0/0:12,0:12:36.12:0,36,695
chr10	43531892	.	G	GTTT	1144.15	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=6.345;DP=588;FS=0.585;HRun=7;HaplotypeScore=96.2749;InbreedingCoeff=0.9970;MQ=66.12;MQ0=10;MQRankSum=-6.007;QD=16.83;ReadPosRankSum=-2.409;VQSLOD=-0.1577;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,108,1456	0/0:11,0:11:33.11:0,33,443	0/0:26,0:17:24.93:0,25,270	0/0:26,0:19:30.65:0,31,303	1/1:7,0:20:29.81:218,30,0	0/0:17,0:17:39.10:0,39,510	0/0:30,0:30:75.18:0,75,986	1/1:4,14:23:51.03:726,51,0	0/0:26,0:26:75.23:0,75,984	0/0:26,0:26:72.18:0,72,937	0/0:15,0:15:42.13:0,42,566	0/0:12,0:12:36.10:0,36,468	0/0:10,0:10:27.09:0,27,366	0/0:13,0:13:30.06:0,30,368	1/1:8,0:16:28.94:168,29,0	1/1:1,0:9:24.63:192,25,0	0/0:39,0:39:99:0,105,1413	0/0:23,0:23:57.15:0,57,746	0/0:23,0:21:54.15:0,54,707	0/0:13,0:13:30.09:0,30,399	0/0:21,0:21:60.19:0,60,809	0/0:11,0:11:27.07:0,27,341	0/0:9,0:9:24.06:0,24,311	0/0:40,0:40:99:0,105,1415	0/0:20,0:20:54.15:0,54,713	0/0:30,0:29:69.17:0,69,887	0/0:22,0:22:60.17:0,60,782	0/0:13,0:13:36.09:0,36,471
chr10	43531912	.	GT	G	889.31	PASS	AB=0.957;AC=7;AF=0.125;AN=56;BaseQRankSum=9.526;DP=562;FS=3.776;HRun=4;HaplotypeScore=66.5549;InbreedingCoeff=0.8349;MQ=57.51;MQ0=8;MQRankSum=-3.522;QD=14.34;ReadPosRankSum=-2.380;VQSLOD=2.1660;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,123,1608	0/0:15,0:15:45.15:0,45,623	0/0:21,0:12:21.07:0,21,289	0/0:21,0:12:21.28:0,21,267	1/1:7,11:18:50.13:482,50,0	0/0:16,0:16:45.10:0,45,590	0/0:23,0:23:66.19:0,66,886	0/1:21,1:22:20.01:20,0,608	0/0:22,0:22:66.20:0,66,899	0/0:30,0:30:87.27:0,87,1209	0/0:22,0:22:57.19:0,57,793	0/0:11,0:11:30.10:0,30,417	0/0:13,0:13:36.11:0,36,485	0/0:12,0:12:33.11:0,33,460	1/1:5,8:13:29.87:317,30,0	1/1:4,5:9:26.42:219,26,0	0/0:34,0:34:96.32:0,96,1337	0/0:24,0:24:66.18:0,66,893	0/0:24,0:22:57.14:0,57,749	0/0:14,0:14:42.14:0,42,576	0/0:22,0:22:66.22:0,66,920	0/0:10,0:10:30.10:0,30,417	0/0:14,0:14:42.13:0,42,564	0/0:41,0:41:99:0,108,1498	0/0:17,0:17:51.15:0,51,693	0/0:24,0:23:60.19:0,60,819	0/0:17,0:16:45.15:0,45,629	0/0:11,0:11:33.08:0,33,423
chr10	43531913	.	T	TTTGTTTG	2505.11	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.167;DP=565;FS=12.182;HRun=0;HaplotypeScore=130.1931;InbreedingCoeff=0.9965;MQ=57.55;MQ0=7;MQRankSum=-3.463;QD=64.23;ReadPosRankSum=-2.328;VQSLOD=2.5680;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,123,2702	0/0:15,0:15:45.15:0,45,1009	0/0:21,0:12:20.29:0,20,360	0/0:23,0:13:24.50:0,24,416	1/1:13,4:18:51.17:1144,51,0	0/0:16,0:16:45.10:0,45,950	0/0:23,0:23:66.20:0,66,1466	0/0:22,0:22:59.08:0,59,835	0/0:22,0:22:66.21:0,66,1420	0/0:31,0:31:87.29:0,87,1966	0/0:22,0:22:57.19:0,57,1294	0/0:11,0:11:30.10:0,30,708	0/0:13,0:13:36.11:0,36,746	0/0:13,0:13:33.11:0,33,729	1/1:10,1:12:33.11:697,33,0	1/1:5,3:9:27.09:807,27,0	0/0:34,0:34:96.33:0,96,2301	0/0:23,0:23:69.17:0,69,1442	0/0:23,0:22:57.19:0,57,1180	0/0:14,0:14:42.14:0,42,789	0/0:22,0:22:66.23:0,66,1513	0/0:11,0:11:30.10:0,30,630	0/0:15,0:15:42.13:0,42,842	0/0:41,0:41:99:0,111,2539	0/0:17,0:17:51.15:0,51,1200	0/0:25,0:24:60.19:0,60,1399	0/0:17,0:16:45.15:0,45,1095	0/0:11,0:11:33.08:0,33,683
chr10	43533675	.	A	ATC	1186.61	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-1.619;DP=547;FS=2.488;HRun=0;HaplotypeScore=92.1379;InbreedingCoeff=0.9290;MQ=86.09;MQ0=0;MQRankSum=-3.209;QD=25.25;ReadPosRankSum=-4.873;VQSLOD=3.2128;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,99,1360	0/0:7,0:7:18.06:0,18,247	0/0:28,0:23:60.10:0,60,771	0/0:26,0:24:51.37:0,51,619	1/1:3,7:10:13.70:230,14,0	0/0:22,0:22:57.17:0,57,766	0/0:13,0:13:39.13:0,39,534	1/1:9,18:27:60.17:904,60,0	0/0:21,0:21:51.17:0,51,700	0/0:18,0:18:51.17:0,51,699	0/0:17,0:16:45.15:0,45,613	0/0:22,0:22:60.19:0,60,809	0/0:17,0:17:51.17:0,51,701	0/0:19,0:19:54.18:0,54,741	1/1:2,5:6:6.02:105,6,0	1/1:3,0:3:6.02:92,6,0	0/0:36,0:36:99:0,102,1362	0/0:28,0:28:78.26:0,78,1070	0/0:27,0:27:72.23:0,72,975	0/0:28,0:28:75.25:0,75,1030	0/0:32,0:32:81.23:0,81,1073	0/0:13,0:13:39.11:0,39,519	0/0:12,0:12:36.12:0,36,495	0/0:21,0:21:48.12:0,48,624	0/0:15,0:15:32.99:0,33,437	0/0:13,0:13:33.10:0,33,440	0/0:16,0:15:42.14:0,42,577	0/0:9,0:9:21.07:0,21,288
chr10	43533705	.	G	GT	2599.08	PASS	AB=0.831;AC=28;AF=0.500;AN=56;BaseQRankSum=-6.494;DP=584;FS=9.020;HRun=12;HaplotypeScore=86.4799;InbreedingCoeff=0.4022;MQ=63.04;MQ0=7;MQRankSum=-1.802;QD=7.34;ReadPosRankSum=-2.646;VQSLOD=1.5043;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:53:56.68:0,57,166	0/0:3,0:7:6.10:0,6,18	0/0:21,1:9:10.81:0,11,68	0/1:19,0:10:24.74:25,0,43	1/1:27,0:26:15.39:65,15,0	0/0:4,0:25:32.58:0,33,96	0/0:1,0:14:24.44:0,24,71	1/1:16,0:16:1.74:5,2,0	0/0:5,0:17:24.44:0,24,72	1/1:7,4:18:13.53:159,14,0	1/1:11,10:21:41.97:354,42,0	0/0:16,0:17:31.63:0,32,218	0/0:18,0:18:29.77:0,30,219	0/1:19,0:20:19.15:19,0,129	1/1:6,0:6:4.27:14,4,0	0/1:8,0:8:0.52:1,0,2	0/0:40,0:42:95.23:0,95,666	0/1:13,22:37:10.10:517,0,10	1/1:20,14:31:20.15:321,20,0	0/1:12,14:26:5.10:201,0,5	1/1:9,15:24:29.88:277,30,0	0/1:13,1:14:2.82:3,0,148	0/0:13,1:14:0.56:0,1,166	0/1:18,4:21:62.97:63,0,253	1/1:6,15:21:8.09:231,8,0	1/1:4,11:15:29.95:272,30,0	1/1:6,11:18:7.98:226,8,0	0/1:3,4:8:13.02:35,0,13
chr10	43534691	.	CT	C	3782.79	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=11.204;DP=653;FS=16.190;HRun=2;HaplotypeScore=65.3016;InbreedingCoeff=0.9994;MQ=90.05;MQ0=0;MQRankSum=-2.048;QD=37.83;ReadPosRankSum=-1.696;VQSLOD=1.7083;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,154,2422	0/0:11,0:11:30.09:0,30,457	0/0:21,0:21:28.76:0,29,807	0/0:28,0:28:73.96:0,74,1095	1/1:0,28:28:81.27:1125,81,0	0/0:21,0:21:63.21:0,63,1007	0/0:18,0:18:54.18:0,54,856	1/1:0,26:26:78.20:1022,78,0	0/0:31,0:31:93.32:0,93,1487	0/0:20,0:20:60.20:0,60,960	0/0:19,0:19:57.19:0,57,907	0/0:19,0:19:57.19:0,57,907	0/0:17,0:17:51.16:0,51,792	0/0:17,0:17:51.17:0,51,815	1/1:0,25:25:60.20:839,60,0	1/1:0,21:21:57.19:797,57,0	0/0:30,0:30:87.28:0,87,1364	0/0:18,0:17:54.18:0,54,863	0/0:22,0:22:66.23:0,66,1056	0/0:21,0:21:63.19:0,63,957	0/0:26,0:26:78.24:0,78,1200	0/0:31,0:31:90.31:0,90,1437	0/0:20,0:20:60.19:0,60,934	0/0:33,0:33:99:0,99,1581	0/0:26,0:26:75.23:0,75,1171	0/0:26,0:26:78.27:0,78,1246	0/0:16,0:16:48.16:0,48,764	0/0:9,0:9:27.09:0,27,428
chr10	43535551	.	A	AAGGAGAAGAC	10039.11	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-8.994;DP=598;FS=24.656;HRun=0;HaplotypeScore=155.7581;InbreedingCoeff=0.9937;MQ=68.34;MQ0=0;MQRankSum=-11.474;QD=64.77;ReadPosRankSum=3.438;VQSLOD=2.8289;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,18:29:30.06:1367,30,0	1/1:1,9:14:24.08:1125,24,0	0/0:37,0:35:67.07:0,67,1886	0/0:32,0:29:73.88:0,74,1716	1/1:3,12:19:30.03:1181,30,0	1/1:0,13:17:24.08:1251,24,0	1/1:3,9:19:18.06:891,18,0	0/0:23,0:23:57.16:0,57,1413	1/1:0,16:21:27.09:1407,27,0	0/0:21,0:21:63.04:0,63,1472	0/0:11,0:10:27.08:0,27,780	0/0:22,0:22:54.10:0,54,1451	0/0:27,0:27:69.21:0,69,1928	0/0:12,0:12:27.08:0,27,742	1/1:3,7:15:18.06:938,18,0	1/1:4,14:21:36.12:1877,36,0	0/0:33,0:33:81.26:0,81,2339	0/0:35,0:35:78.37:0,78,2511	0/0:23,0:23:57.15:0,57,1425	0/0:9,0:9:27.08:0,27,705	0/0:33,0:33:81.22:0,81,2228	0/0:11,0:11:24.07:0,24,656	0/0:8,0:8:18.06:0,18,555	0/0:33,0:33:87.25:0,87,2431	0/0:9,0:9:27.06:0,27,719	0/0:32,0:32:78.19:0,78,2028	0/0:21,0:21:54.17:0,54,1575	0/0:9,0:9:27.01:0,27,530
chr10	43535917	.	A	ATG	696.25	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=1.878;DP=392;FS=0.932;HRun=0;HaplotypeScore=68.7051;InbreedingCoeff=0.8918;MQ=63.37;MQ0=2;MQRankSum=-3.315;QD=22.46;ReadPosRankSum=1.692;VQSLOD=3.9996;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:28:35.28:0,35,756	0/0:6,0:6:16.87:0,17,230	0/0:29,0:10:25.50:0,26,253	0/0:19,0:10:26.43:0,26,308	1/1:0,11:15:38.59:517,39,0	0/0:4,0:4:9.03:0,9,145	0/0:7,0:7:12.04:0,12,189	0/0:20,0:18:45.15:0,45,704	0/0:9,0:9:18.06:0,18,273	0/0:11,0:11:33.11:0,33,519	0/0:4,0:4:9.03:0,9,144	0/0:11,0:11:30.10:0,30,482	0/0:7,0:7:21.06:0,21,312	0/0:14,0:14:36.12:0,36,556	1/1:0,9:11:12.03:175,12,0	1/1:1,4:5:9.01:137,9,0	0/0:39,0:39:99:0,111,1748	0/0:17,0:17:27.08:0,27,412	0/0:19,0:17:42.14:0,42,634	0/0:6,0:6:15.05:0,15,236	0/0:8,0:8:21.07:0,21,314	0/0:14,0:14:42.14:0,42,683	0/0:13,0:13:36.12:0,36,566	0/0:21,0:21:54.15:0,54,810	0/0:6,0:6:12.04:0,12,183	0/0:12,0:12:36.11:0,36,527	0/0:19,0:18:36.12:0,36,564	0/0:16,0:16:39.13:0,39,604
chr10	43535918	.	C	CA	2536.99	PASS	AB=0.668;AC=35;AF=0.625;AN=56;BaseQRankSum=0.510;DP=391;FS=5.739;HRun=13;HaplotypeScore=55.7272;InbreedingCoeff=0.4773;MQ=63.19;MQ0=2;MQRankSum=-4.197;QD=10.31;ReadPosRankSum=-0.133;VQSLOD=2.7741;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:9,18:28:3.68:299,4,0	1/1:0,5:6:17.94:156,18,0	0/0:29,0:10:4.78:0,5,36	0/1:20,0:10:14.23:14,0,51	1/1:16,0:16:24.85:176,25,0	1/1:1,3:4:9.01:84,9,0	0/1:2,5:7:11.58:40,0,12	1/1:6,15:20:18.37:308,18,0	1/1:7,2:9:8.96:75,9,0	1/1:4,7:11:9.44:228,9,0	1/1:3,2:4:3.89:30,4,0	0/0:10,0:11:22.80:0,23,148	0/0:7,0:7:11.85:0,12,82	0/0:12,0:14:30.77:0,31,194	1/1:8,0:8:9.08:48,9,0	1/1:4,0:4:8.44:41,8,0	0/0:36,0:38:50.52:0,51,435	1/1:4,12:17:8.15:100,8,0	0/1:8,12:18:40.07:231,0,40	1/1:2,3:6:5.17:78,5,0	1/1:1,8:9:0.49:147,0,0	0/0:14,0:14:14.78:0,15,103	0/0:12,0:12:29.70:0,30,203	0/0:20,0:20:32.61:0,33,222	0/1:2,3:6:3.80:75,0,4	1/1:2,7:12:23.54:183,24,0	1/1:12,8:19:1.34:145,1,0	0/1:2,14:16:2.12:267,0,2
chr10	43536300	.	CACACACATACAG	C	1099.11	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=3.945;DP=632;FS=1.841;HRun=0;HaplotypeScore=223.8440;InbreedingCoeff=0.8495;MQ=58.72;MQ0=9;MQRankSum=-3.920;QD=13.91;ReadPosRankSum=-1.315;VQSLOD=1.9607;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:16,4:20:0.47:0,0,1	1/1:6,4:10:15.04:321,15,0	0/0:48,0:24:50.35:0,50,1685	0/0:55,0:25:66.82:0,67,1957	0/0:18,0:18:21.07:0,21,535	1/1:15,3:17:15.52:258,16,0	1/1:13,4:17:9.03:253,9,0	0/0:23,0:23:62.53:0,63,2296	1/1:8,2:10:15.52:417,16,0	0/0:27,0:26:75.20:0,75,3185	0/0:23,0:23:50.86:0,51,2368	0/0:16,0:16:27.09:0,27,1314	0/0:10,0:10:18.06:0,18,907	0/0:16,0:16:30.10:0,30,1711	0/0:11,0:10:12.45:0,12,502	0/0:9,0:9:15.52:0,16,352	0/0:28,0:28:69.24:0,69,3786	0/1:24,0:23:0.62:1,0,2208	0/0:19,0:19:48.16:0,48,2129	0/0:21,0:21:51.62:0,52,2427	0/0:57,0:56:99:0,142,7209	0/0:17,0:17:38.77:0,39,1572	0/0:20,0:20:54.12:0,54,2245	0/0:42,0:42:91.14:0,91,3999	0/0:17,0:17:45.15:0,45,2490	0/0:15,0:15:45.15:0,45,2098	0/0:23,0:23:63.11:0,63,3240	0/0:17,0:17:39.10:0,39,1944
chr10	43536310	.	CAG	C	168.56	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=7.091;DP=653;FS=0.000;HRun=0;HaplotypeScore=145.1634;InbreedingCoeff=0.7886;MQ=52.88;MQ0=14;MQRankSum=-2.175;QD=2.76;ReadPosRankSum=-0.373;VQSLOD=2.4300;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:18,4:22:1.36:0,1,3	1/1:9,0:9:12.25:77,12,0	0/0:53,0:17:44.93:0,45,591	0/0:70,0:31:74.72:0,75,939	0/0:20,1:21:26.07:0,26,185	1/1:18,1:18:6.07:90,6,0	1/1:17,5:22:8.94:68,9,0	0/0:27,0:26:36.31:0,36,992	1/1:11,0:11:12.59:75,13,0	0/0:29,0:28:71.06:0,71,1249	0/0:22,0:22:48.11:0,48,823	0/0:15,0:15:14.29:0,14,410	0/0:7,0:7:3.40:0,3,275	0/0:13,0:13:30.10:0,30,577	0/0:13,0:12:2.32:0,2,129	0/0:10,0:10:12.47:0,12,108	0/0:27,0:27:51.65:0,52,1218	0/0:24,0:23:9.43:0,9,773	0/0:18,0:17:45.08:0,45,736	0/0:21,0:21:38.63:0,39,879	0/0:59,0:58:99:0,150,2581	0/0:16,0:16:35.94:0,36,620	0/0:19,0:19:48.12:0,48,814	0/0:37,0:37:80.87:0,81,1320	0/0:15,0:15:32.37:0,32,760	0/0:17,0:17:50.86:0,51,829	0/0:25,0:24:54.31:0,54,1124	0/0:11,0:11:33.11:0,33,636
chr10	43536312	.	G	GAC	494.35	PASS	AB=0.960;AC=15;AF=0.268;AN=56;BaseQRankSum=7.001;DP=657;FS=2.533;HRun=0;HaplotypeScore=152.8404;InbreedingCoeff=0.7801;MQ=52.34;MQ0=16;MQRankSum=-5.766;QD=3.63;ReadPosRankSum=-2.948;VQSLOD=2.4918;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:2.30:0,2,7	1/1:9,0:9:8.85:66,9,0	0/0:53,0:16:15.48:0,15,160	0/0:72,0:31:35.67:0,36,382	1/1:8,15:23:19.98:191,20,0	1/1:21,0:20:12.94:64,13,0	1/1:25,0:25:0.94:3,1,0	0/0:24,0:25:49.92:0,50,570	1/1:11,0:11:6.29:20,6,0	0/0:26,0:26:60.01:0,60,707	0/0:20,0:20:39.12:0,39,480	0/0:14,0:15:26.92:0,27,309	0/0:6,0:7:17.88:0,18,186	0/0:13,0:13:30.09:0,30,369	1/1:3,10:12:20.13:222,20,0	1/1:6,4:10:5.04:55,5,0	0/0:26,0:27:65.96:0,66,757	0/1:23,1:23:48.24:48,0,416	0/0:19,0:17:35.94:0,36,394	0/0:20,0:20:47.78:0,48,566	0/0:59,0:58:99:0,120,1500	0/0:15,0:15:30.09:0,30,369	0/0:18,0:18:36.10:0,36,430	0/0:37,0:37:52.93:0,53,662	0/0:14,0:14:41.72:0,42,490	0/0:17,0:17:39.12:0,39,480	0/0:24,0:25:62.83:0,63,703	0/0:12,0:12:32.93:0,33,391
chr10	43536340	.	CAGAG	C	331.65	PASS	AB=0.880;AC=6;AF=0.107;AN=56;BaseQRankSum=4.887;DP=578;FS=17.479;HRun=0;HaplotypeScore=168.7343;InbreedingCoeff=0.4636;MQ=46.72;MQ0=15;MQRankSum=-4.537;QD=5.82;ReadPosRankSum=0.803;VQSLOD=1.8627;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:14,6:20:3.53:0,4,10	1/1:6,2:8:7.31:140,7,0	0/0:43,1:7:17.86:0,18,245	0/0:63,1:27:55.16:0,55,1360	0/0:20,0:19:14.93:0,15,142	0/1:13,6:18:84.01:153,0,84	0/0:17,4:21:1.27:0,1,3	0/0:23,0:22:52.37:0,52,816	1/1:3,7:10:4.58:148,5,0	0/0:20,0:20:57.20:0,57,1553	0/0:19,0:19:39.12:0,39,884	0/0:13,0:13:24.08:0,24,666	0/0:6,0:6:12.04:0,12,301	0/0:13,0:13:30.10:0,30,815	0/0:12,0:12:1.80:0,2,179	0/0:4,1:5:2.22:0,2,8	0/0:26,0:26:69.71:0,70,1766	0/1:19,0:19:0.32:0,0,915	0/0:15,0:13:36.12:0,36,811	0/0:16,0:16:33.07:0,33,835	0/0:50,0:50:99:0,114,2920	0/0:15,0:15:32.93:0,33,791	0/0:17,0:17:42.14:0,42,1049	0/0:31,0:31:60.98:0,61,1406	0/0:18,0:18:45.15:0,45,1181	0/0:14,0:14:39.12:0,39,1023	0/0:27,0:26:75.12:0,75,1735	0/0:10,0:10:30.10:0,30,664
chr10	43536344	.	G	GAC	507.09	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=8.127;DP=558;FS=4.589;HRun=0;HaplotypeScore=155.5314;InbreedingCoeff=0.7728;MQ=46.74;MQ0=10;MQRankSum=-7.333;QD=3.62;ReadPosRankSum=-7.836;VQSLOD=-0.3776;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:20:3.56:15,4,0	1/1:9,0:9:0.42:1,0,0	0/0:42,0:6:17.88:0,18,163	0/0:57,0:27:49.86:0,50,506	1/1:21,0:20:10.95:47,11,0	1/1:10,0:16:14.96:78,15,0	1/1:20,0:24:3.90:21,4,0	1/1:7,15:21:35.96:399,36,0	0/1:10,0:10:8.68:11,0,9	0/0:20,0:20:57.13:0,57,677	0/0:17,0:17:27.03:0,27,319	0/0:13,0:13:21.07:0,21,265	0/0:7,0:7:6.02:0,6,77	0/0:13,0:13:21.07:0,21,263	1/1:10,0:12:19.53:101,20,0	1/1:5,0:5:2.03:6,2,0	0/0:27,0:27:56.77:0,57,677	0/0:20,0:19:35.93:0,36,411	0/0:14,0:13:26.91:0,27,304	0/0:15,0:15:29.82:0,30,330	0/0:46,0:46:96.21:0,96,1147	0/0:14,0:14:27.03:0,27,322	0/0:17,0:17:39.10:0,39,460	0/0:29,0:29:46.81:0,47,504	0/0:18,0:18:27.07:0,27,329	0/0:12,0:12:36.12:0,36,457	0/0:26,0:25:63.18:0,63,760	0/0:10,0:10:12.04:0,12,148
chr10	43536351	.	ACGCGCG	A	78.14	PASS	AB=0.881;AC=4;AF=0.071;AN=56;BaseQRankSum=-0.258;DP=540;FS=8.400;HRun=0;HaplotypeScore=180.0676;InbreedingCoeff=0.0834;MQ=48.77;MQ0=8;MQRankSum=-0.050;QD=0.99;ReadPosRankSum=-2.502;VQSLOD=1.7496;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:20,3:23:0.95:4,0,1	0/0:6,1:7:9.03:0,9,181	0/0:46,0:12:34.53:0,35,698	0/0:49,0:25:54.27:0,54,1348	0/1:2,9:22:54.46:54,0,121	0/0:20,0:19:29.76:0,30,352	0/0:17,8:25:10.04:0,10,172	0/1:21,0:20:99:111,0,193	0/0:11,0:11:8.24:0,8,95	0/0:20,0:20:57.20:0,57,1334	0/0:13,0:14:27.04:0,27,561	0/0:15,0:15:21.07:0,21,470	0/0:7,0:7:9.03:0,9,188	0/0:14,0:14:21.07:0,21,515	0/1:3,1:13:3.93:4,0,187	0/0:3,1:6:2.74:0,3,12	0/0:26,0:26:66.68:0,67,1958	0/0:19,0:18:10.07:0,10,708	0/0:14,0:13:33.11:0,33,672	0/0:12,0:13:30.08:0,30,696	0/0:41,0:41:96.13:0,96,2234	0/0:14,0:14:26.81:0,27,625	0/0:16,0:16:39.13:0,39,803	0/0:25,0:25:48.99:0,49,977	0/0:16,0:16:27.09:0,27,645	0/0:13,0:13:39.13:0,39,876	0/0:24,0:23:65.81:0,66,1440	0/0:4,0:4:12.04:0,12,262
chr10	43536357	.	GCA	G	4582.65	PASS	AB=0.976;AC=39;AF=0.696;AN=56;BaseQRankSum=-2.675;DP=507;FS=9.816;HRun=0;HaplotypeScore=138.3416;InbreedingCoeff=0.7251;MQ=50.99;MQ0=7;MQRankSum=2.963;QD=13.80;ReadPosRankSum=6.388;VQSLOD=3.7105;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:1.02:0,1,3	1/1:8,0:8:1.36:3,1,0	0/1:40,1:14:11.92:12,0,297	0/0:46,0:24:15.91:0,16,322	0/0:22,0:22:10.93:0,11,47	0/0:20,0:19:12.10:0,12,59	0/0:25,0:25:4.17:0,4,19	1/1:11,2:12:6.09:51,6,0	1/1:9,1:10:5.81:42,6,0	1/1:5,16:21:45.03:504,45,0	1/1:5,10:16:20.74:236,21,0	1/1:5,9:14:15.05:183,15,0	1/1:2,5:7:6.01:67,6,0	1/1:3,8:11:15.05:183,15,0	0/0:13,0:13:14.25:0,14,62	0/0:5,0:5:0.47:0,0,1	0/0:23,0:23:48.16:0,48,750	1/1:4,12:15:23.91:293,24,0	1/1:8,4:12:24.02:266,24,0	1/1:5,7:12:18.21:200,18,0	1/1:20,19:40:35.94:417,36,0	1/1:3,12:15:20.82:241,21,0	1/1:4,13:17:27.08:329,27,0	1/1:5,15:21:27.03:312,27,0	1/1:2,12:14:24.06:282,24,0	1/1:11,5:16:30.04:330,30,0	1/1:8,15:24:41.96:486,42,0	1/1:2,2:4:12.04:146,12,0
chr10	43536387	.	AT	A	975.72	PASS	AB=0.766;AC=25;AF=0.446;AN=56;BaseQRankSum=0.919;DP=491;FS=11.566;HRun=17;HaplotypeScore=125.9702;InbreedingCoeff=0.1160;MQ=55.79;MQ0=15;MQRankSum=-1.990;QD=3.47;ReadPosRankSum=1.535;VQSLOD=-0.2191;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,0:16:2.97:29,3,0	1/1:2,0:5:3.83:11,4,0	0/0:19,0:9:5.94:0,6,41	0/0:23,0:13:9.80:0,10,71	0/1:19,4:25:20.15:73,0,20	1/1:8,0:16:20.61:70,21,0	1/1:5,0:16:20.15:56,20,0	0/0:33,0:32:36.60:0,37,200	1/1:4,0:8:13.40:46,13,0	0/1:16,3:20:44.34:59,0,44	0/1:7,4:12:21.53:53,0,22	0/0:13,1:13:1.87:0,2,79	0/0:9,0:10:14.71:0,15,99	0/0:15,0:16:25.77:0,26,189	0/1:9,3:12:12.30:53,0,12	0/1:5,4:9:7.36:66,0,7	0/0:34,0:34:59.89:0,60,450	0/1:15,3:17:52.51:53,0,86	0/1:15,6:23:12.42:110,0,12	0/1:7,3:10:32.24:32,0,52	0/1:16,5:20:25.32:35,0,25	0/0:18,0:14:20.64:0,21,154	0/0:20,1:21:7.33:0,7,126	0/0:18,0:19:0.47:0,0,82	0/1:13,5:20:0.19:126,0,0	1/1:10,8:18:29.20:165,29,0	0/1:9,4:13:33.43:53,0,33	1/1:3,4:6:11.55:63,12,0
chr10	43537232	.	CT	C	4404.55	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=11.149;DP=599;FS=4.035;HRun=10;HaplotypeScore=62.7633;InbreedingCoeff=0.9862;MQ=60.87;MQ0=1;MQRankSum=-0.950;QD=19.32;ReadPosRankSum=1.909;VQSLOD=5.9486;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,28:35:74.97:651,75,0	1/1:2,7:9:15:130,15,0	0/0:10,0:8:21.02:0,21,217	0/0:13,0:6:14.03:0,14,125	1/1:4,33:37:77.85:662,78,0	1/1:3,16:18:41.98:365,42,0	1/1:3,12:14:35.98:313,36,0	1/1:9,26:35:74.96:651,75,0	1/1:7,20:27:59.97:521,60,0	0/0:26,0:26:66.14:0,66,715	0/0:17,0:17:39.09:0,39,422	0/0:24,0:24:69.19:0,69,763	0/0:11,1:12:10.05:0,10,322	0/0:18,0:18:35.27:0,35,468	1/1:2,25:27:38.80:566,39,0	1/1:3,21:24:62.98:547,63,0	0/0:22,0:22:30.56:0,31,499	0/0:19,0:20:41.11:0,41,492	0/0:29,0:30:69:0,69,725	0/0:23,0:23:60.12:0,60,650	0/0:12,0:12:33.09:0,33,365	0/0:15,0:15:39.08:0,39,414	0/0:17,0:17:42.09:0,42,449	0/0:20,0:20:60.10:0,60,648	0/0:22,0:22:42.10:0,42,456	0/0:25,0:25:69.16:0,69,741	0/0:28,1:29:49.10:0,49,748	0/0:16,0:16:42.09:0,42,455
chr10	43537412	.	CATAGATAGATAG	C	4475.21	PASS	AB=0.791;AC=22;AF=0.393;AN=56;BaseQRankSum=-1.040;DP=556;FS=0.000;HRun=0;HaplotypeScore=218.5520;InbreedingCoeff=0.6568;MQ=56.48;MQ0=5;MQRankSum=-4.851;QD=17.08;ReadPosRankSum=0.320;VQSLOD=3.5907;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:5.38:0,5,91	0/0:12,0:12:15.05:0,15,328	0/0:16,0:13:12.04:0,12,251	0/0:19,0:17:3.01:0,3,46	0/0:17,0:17:3.01:0,3,46	1/1:15,0:15:2.40:10,2,0	0/1:7,0:7:0:0,0,0	0/0:31,0:30:30.09:0,30,568	0/1:14,0:13:41.51:42,0,43	1/1:16,16:32:42.13:1084,42,0	0/1:6,14:20:0.01:0,0,0	0/0:9,0:22:30.10:0,30,770	0/0:6,0:23:19.03:0,19,505	0/0:5,0:17:33.11:0,33,819	0/1:18,0:17:0:0,0,0	0/0:15,0:15:6:0,6,68	0/0:23,0:23:43.37:0,43,2338	1/1:13,1:13:5.48:148,5,0	1/1:10,5:12:15.05:335,15,0	0/1:8,16:24:0:0,0,0	1/1:22,0:22:11.99:259,12,0	0/0:14,0:28:23.75:0,24,496	0/0:10,0:28:45.15:0,45,1088	0/0:11,0:14:21.07:0,21,480	0/1:5,19:24:0:0,0,0	1/1:8,16:24:51.12:1490,51,0	1/1:9,17:26:27.04:940,27,0	1/1:5,2:7:12.04:168,12,0
chr10	43537435	.	A	AGAT	833.29	PASS	AB=0.960;AC=8;AF=0.148;AN=54;BaseQRankSum=1.509;DP=480;FS=1.582;HRun=0;HaplotypeScore=153.3224;InbreedingCoeff=-0.1253;MQ=47.99;MQ0=11;MQRankSum=-1.342;QD=6.51;ReadPosRankSum=1.069;VQSLOD=3.1766;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:6.01:0,6,92	0/0:9,0:9:15.05:0,15,243	0/0:15,0:7:12.04:0,12,189	0/0:13,0:9:14.92:0,15,198	0/0:22,0:21:3.01:0,3,46	0/0:10,0:10:3.01:0,3,57	./.	0/0:24,0:22:57.65:0,58,838	0/0:14,0:14:12.04:0,12,187	0/1:16,0:16:99:165,0,163	0/0:16,0:16:6.02:0,6,92	0/0:17,0:17:36.03:0,36,366	0/0:24,0:22:36.05:0,36,418	0/0:20,0:20:48.08:0,48,549	0/1:15,0:14:0:0,0,0	0/0:16,0:16:5.73:0,6,68	0/0:25,0:25:49.80:0,50,831	0/1:8,4:11:9.44:79,0,9	0/1:13,0:10:99:137,0,109	0/0:19,0:17:2.84:0,3,46	0/1:13,1:14:73.70:176,0,74	0/0:23,0:23:30.02:0,30,324	0/0:26,0:25:54.07:0,54,585	0/0:15,0:15:27.93:0,28,296	0/0:23,0:23:6.02:0,6,92	0/1:22,0:22:99:186,0,321	0/1:22,0:19:59.27:75,0,59	0/1:14,0:13:99:141,0,203
chr10	43537438	.	TA	T	726.29	PASS	AB=0.931;AC=9;AF=0.167;AN=54;BaseQRankSum=6.364;DP=482;FS=2.997;HRun=1;HaplotypeScore=144.6105;InbreedingCoeff=-0.0262;MQ=47.36;MQ0=11;MQRankSum=-3.017;QD=5.76;ReadPosRankSum=2.197;VQSLOD=0.8005;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:6.02:0,6,92	0/0:9,0:9:14.88:0,15,226	0/0:18,0:8:14.63:0,15,258	0/0:11,0:8:15.04:0,15,204	0/0:22,0:21:3.01:0,3,46	0/0:10,0:10:2.97:0,3,20	./.	0/0:24,0:22:57.16:0,57,802	0/0:14,0:14:12:0,12,121	0/1:16,0:16:41.17:167,0,41	0/0:17,0:17:9.01:0,9,114	0/0:17,0:17:17.40:0,17,113	0/0:25,0:23:20.34:0,20,234	0/0:20,0:20:29.80:0,30,291	0/1:13,0:12:0:0,0,0	0/0:16,0:16:5.74:0,6,68	0/0:25,0:25:55.05:0,55,854	1/1:12,0:11:1.66:57,2,0	0/1:12,0:10:99:111,0,169	0/0:19,0:17:3:0,3,45	0/1:9,5:14:69.24:134,0,69	0/0:24,0:24:22.82:0,23,242	0/0:29,0:28:32.44:0,32,280	0/0:14,0:13:9.22:0,9,104	0/0:21,0:21:5.52:0,6,88	0/1:22,0:22:99:164,0,207	0/1:23,0:20:18.51:79,0,19	0/1:10,4:13:99:141,0,191
chr10	43537443	.	AGATAGAT	A	1408.22	PASS	AB=0.977;AC=17;AF=0.327;AN=52;BaseQRankSum=7.775;DP=481;FS=4.832;HRun=0;HaplotypeScore=168.3225;InbreedingCoeff=0.1199;MQ=45.64;MQ0=8;MQRankSum=-5.955;QD=6.34;ReadPosRankSum=2.021;VQSLOD=2.5449;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:12,6:17:0.11:0,0,0	1/1:8,0:8:7.25:78,7,0	0/0:18,0:7:16.50:0,17,168	0/0:13,0:8:18.06:0,18,250	./.	1/1:8,3:11:2.95:74,3,0	./.	0/1:21,0:19:99:131,0,281	1/1:1,13:14:9.03:223,9,0	0/1:16,0:16:6.20:251,0,6	0/0:18,0:18:8.87:0,9,126	0/0:19,0:19:41.70:0,42,395	0/1:26,0:24:1.69:2,0,280	0/0:21,0:21:45.21:0,45,464	0/1:13,0:12:0:0,0,0	0/1:15,0:15:0:0,0,0	0/0:26,0:26:0.94:0,1,1607	0/1:10,0:10:31.98:49,0,32	0/1:12,0:12:42.80:43,0,243	0/0:21,0:19:8.92:0,9,126	0/1:12,0:12:39.21:39,0,66	0/0:19,0:20:23.81:0,24,249	0/0:30,0:30:50.28:0,50,436	0/0:14,0:13:5.35:0,5,146	0/0:22,0:22:6.02:0,6,84	0/1:23,0:22:99:377,0,168	0/1:23,0:20:50.32:282,0,50	0/0:14,0:13:24.08:0,24,320
chr10	43537447	.	AGAT	A	589.77	PASS	AB=1.000;AC=22;AF=0.423;AN=52;BaseQRankSum=8.542;DP=482;FS=11.884;HRun=0;HaplotypeScore=152.1789;InbreedingCoeff=-0.1463;MQ=45.20;MQ0=9;MQRankSum=0.539;QD=1.77;ReadPosRankSum=6.554;VQSLOD=1.4407;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:17,0:16:0.11:0,0,0	1/1:2,6:8:9.03:150,9,0	0/0:22,0:9:22.52:0,23,248	0/0:14,0:6:18.06:0,18,250	./.	1/1:8,1:9:3.01:39,3,0	./.	0/1:19,0:17:99:131,0,186	1/1:13,0:13:9.03:115,9,0	0/1:18,0:18:32.53:33,0,133	0/0:19,0:19:11.90:0,12,168	0/1:19,0:19:22.86:23,0,135	0/1:26,0:24:19.99:20,0,179	0/1:21,0:21:16.82:17,0,214	0/1:12,0:12:0:0,0,0	0/1:15,0:15:0:0,0,0	0/1:25,0:25:2.22:2,0,988	0/1:10,0:10:23.21:23,0,70	0/0:13,0:13:11.34:0,11,252	0/0:21,0:19:8.92:0,9,126	0/1:11,0:11:16.88:17,0,75	0/1:20,0:20:6.55:7,0,145	0/1:29,0:29:33.71:34,0,129	0/1:13,0:12:22.54:32,0,23	0/0:23,0:23:6.01:0,6,84	0/1:24,0:23:50.19:50,0,259	0/1:24,0:21:45.53:46,0,95	0/0:14,0:13:24.08:0,24,335
chr10	43537528	.	ATAGG	A	1345.19	PASS	AB=0.875;AC=24;AF=0.444;AN=54;BaseQRankSum=0.297;DP=450;FS=33.079;HRun=0;HaplotypeScore=94.9550;InbreedingCoeff=0.4246;MQ=35.76;MQ0=18;MQRankSum=-5.453;QD=5.93;ReadPosRankSum=-2.722;VQSLOD=-0.2348;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:13:1.15:0,1,3	1/1:10,0:10:3.87:27,4,0	0/0:16,0:8:20.93:0,21,175	0/0:15,0:6:14.96:0,15,136	./.	0/0:13,0:12:2.94:0,3,18	0/0:4,0:3:0.47:0,0,1	1/1:15,0:11:22.08:158,22,0	0/0:8,0:8:0:0,0,0	1/1:24,0:23:0.46:285,0,0	1/1:14,0:12:5.99:50,6,0	0/1:20,0:14:10.71:11,0,223	0/0:19,0:18:27.10:0,27,418	0/0:11,0:11:5.75:0,6,125	1/1:5,1:5:2.84:14,3,0	1/1:11,0:11:0.47:1,0,0	0/0:17,0:16:26.80:0,27,341	1/1:9,2:8:8.95:68,9,0	1/1:8,0:5:5.33:105,5,0	0/1:29,0:29:8.17:125,0,8	0/0:7,0:7:2.97:0,3,20	0/0:27,0:26:1.12:0,1,258	0/0:26,0:26:37.53:0,38,352	0/0:17,0:14:4.34:0,4,154	0/1:0,19:19:0:0,0,0	0/1:28,0:28:17.06:335,0,17	1/1:20,1:18:20.46:162,20,0	1/1:11,0:11:16.93:162,17,0
chr10	43537530	.	AGGTG	A	566.12	PASS	AB=0.978;AC=13;AF=0.241;AN=54;BaseQRankSum=-1.097;DP=444;FS=18.647;HRun=0;HaplotypeScore=97.0405;InbreedingCoeff=0.0806;MQ=35.73;MQ0=19;MQRankSum=-0.378;QD=3.03;ReadPosRankSum=-3.915;VQSLOD=-0.7142;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:1.15:0,1,3	1/1:7,0:10:5.13:45,5,0	0/0:17,0:8:23.93:0,24,355	0/0:16,0:6:14.79:0,15,246	./.	0/1:12,0:12:0.09:0,0,0	0/0:3,0:3:0.47:0,0,1	1/1:4,8:8:24.07:336,24,0	0/0:5,2:8:0:0,0,0	0/0:25,0:24:20.87:0,21,231	0/0:14,0:12:0.66:0,1,2	0/1:19,0:13:60.42:60,0,300	0/1:17,2:18:30.15:30,0,480	0/0:10,1:11:1.63:0,2,215	0/0:5,0:4:1.82:0,2,5	0/0:10,0:10:0.83:0,1,2	0/0:17,0:16:26.34:0,26,384	0/1:11,0:8:0.11:1,0,0	0/1:8,0:5:18.94:19,0,22	0/1:29,0:29:38.58:39,0,40	0/0:5,0:5:3.01:0,3,47	0/1:26,1:26:91.52:92,0,481	0/0:28,0:27:38.32:0,38,690	0/0:18,0:15:7.34:0,7,283	0/0:19,0:19:0:0,0,0	0/1:28,0:28:18.25:18,0,253	0/0:21,0:18:1.06:0,1,20	0/1:11,0:10:48.17:56,0,48
chr10	43537558	.	G	GATA	124.18	PASS	AB=0.948;AC=13;AF=0.260;AN=50;BaseQRankSum=0.865;DP=440;FS=33.082;HRun=0;HaplotypeScore=96.0443;InbreedingCoeff=-0.0705;MQ=35.30;MQ0=22;MQRankSum=2.203;QD=0.64;ReadPosRankSum=-0.740;VQSLOD=0.1629;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:8:5.01:0,5,27	0/0:8,0:8:5.95:0,6,50	0/0:12,0:6:18.06:0,18,255	0/0:13,0:5:14.64:0,15,189	./.	0/0:12,0:10:2.74:0,3,12	./.	0/0:16,0:6:18.06:0,18,264	./.	0/0:30,0:29:19.53:0,20,828	0/1:13,0:12:1.98:2,0,28	0/1:17,0:11:3.96:4,0,180	0/1:16,0:16:64.14:64,0,232	0/1:12,0:13:11.84:12,0,175	1/1:9,0:7:2.82:25,3,0	1/1:8,0:8:1.44:5,1,0	0/0:20,0:19:17.26:0,17,446	0/0:14,0:11:17.95:0,18,301	0/0:9,0:6:15.05:0,15,223	0/1:26,3:29:16.21:16,0,55	0/0:5,0:5:3.01:0,3,45	0/0:28,0:27:31.32:0,31,401	0/0:29,0:28:17.61:0,18,556	0/1:15,0:13:29.65:30,0,164	0/1:20,0:20:1.59:2,0,26	0/1:26,3:26:77.86:78,0,495	0/1:22,0:20:14.74:15,0,127	0/0:7,0:6:6.56:0,7,108
chr10	43537612	.	GTGGA	G	551.40	PASS	AB=0.972;AC=19;AF=0.339;AN=56;BaseQRankSum=3.104;DP=458;FS=25.376;HRun=0;HaplotypeScore=95.5164;InbreedingCoeff=0.6004;MQ=41.63;MQ0=20;MQRankSum=-0.911;QD=4.67;ReadPosRankSum=-3.044;VQSLOD=-0.5571;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:6,2:7:6.02:94,6,0	1/1:2,1:3:3.01:49,3,0	0/0:43,0:9:8.98:0,9,167	0/0:28,0:3:6.02:0,6,105	1/1:10,4:14:2.71:49,3,0	1/1:6,0:3:3.01:49,3,0	1/1:4,5:6:12.04:193,12,0	0/0:25,0:15:24.03:0,24,295	1/1:1,1:1:3:28,3,0	0/0:17,0:17:36.08:0,36,707	0/0:17,0:17:27.08:0,27,599	0/0:20,0:19:30.10:0,30,724	0/1:18,1:18:0.05:0,0,880	0/0:11,0:11:21.07:0,21,441	1/1:6,2:6:2.88:48,3,0	1/1:7,2:6:12.04:193,12,0	0/0:18,0:18:29.99:0,30,492	0/1:11,0:11:13.67:14,0,343	0/0:8,0:8:21.03:0,21,397	0/1:28,1:29:2.76:3,0,904	0/0:8,0:7:9.03:0,9,218	0/0:26,0:26:38.95:0,39,925	0/0:18,0:17:18.06:0,18,437	0/0:14,0:12:9.96:0,10,220	0/0:24,0:24:47.71:0,48,998	0/0:26,0:23:54.02:0,54,1193	0/0:25,0:24:48.12:0,48,980	0/0:12,0:12:36.12:0,36,842
chr10	43537642	.	AGATG	A	137.87	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=2.677;DP=493;FS=31.412;HRun=0;HaplotypeScore=113.6344;InbreedingCoeff=0.2186;MQ=41.57;MQ0=32;MQRankSum=-3.448;QD=1.94;ReadPosRankSum=-2.062;VQSLOD=0.1115;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:5,0:5:16.66:17,0,27	0/0:3,0:3:4.56:0,5,38	0/0:49,0:5:11.63:0,12,171	0/0:49,0:10:6.35:0,6,280	0/1:27,0:26:0.29:1,0,0	0/0:6,0:4:2.64:0,3,27	0/1:7,0:5:24.46:24,0,26	1/1:9,5:9:13.86:190,14,0	0/0:6,0:3:5.38:0,5,43	0/0:28,0:26:67.31:0,67,949	0/0:21,0:18:26.88:0,27,498	0/0:24,0:21:39.10:0,39,834	0/0:19,0:16:31.43:0,31,888	0/0:9,0:9:15.05:0,15,382	0/1:7,0:6:1.98:2,0,40	0/1:11,0:8:23.47:23,0,27	0/0:17,0:17:12.61:0,13,405	0/0:8,0:7:17.99:0,18,344	0/0:11,0:8:23.94:0,24,422	0/0:28,0:25:45.58:0,46,960	0/0:8,0:8:12.51:0,13,279	0/0:25,0:23:47.91:0,48,1055	0/0:17,0:15:21.07:0,21,512	0/0:10,0:10:9.01:0,9,226	0/0:24,0:23:48.97:0,49,933	0/0:26,0:25:71.64:0,72,1361	0/0:21,0:18:44.64:0,45,688	0/0:12,0:12:33.08:0,33,723
chr10	43537654	.	G	GGATA	2970.20	PASS	AB=0.939;AC=37;AF=0.740;AN=50;BaseQRankSum=-4.173;DP=466;FS=16.149;HRun=0;HaplotypeScore=107.6613;InbreedingCoeff=0.2088;MQ=41.28;MQ0=27;MQRankSum=0.358;QD=8.32;ReadPosRankSum=1.543;VQSLOD=1.5764;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:8,0:8:0:0,0,0	0/1:5,0:4:2.86:23,0,3	./.	./.	0/1:26,0:25:0.17:0,0,0	1/1:6,0:5:5.03:30,5,0	./.	1/1:11,0:6:3.01:40,3,0	1/1:5,0:3:6.02:97,6,0	1/1:30,0:27:50.88:714,51,0	1/1:19,0:16:0.47:1,0,0	1/1:17,6:20:15.05:354,15,0	1/1:16,2:15:15.05:337,15,0	1/1:6,1:7:6.02:115,6,0	0/0:7,0:6:8.69:0,9,66	0/0:11,0:8:14.51:0,15,119	0/1:16,1:17:4.22:282,0,4	1/1:8,0:7:5.92:39,6,0	1/1:10,0:9:8.99:155,9,0	1/1:27,0:24:6.02:92,6,0	0/0:7,0:7:0.89:0,1,2	1/1:24,2:24:18.05:380,18,0	0/1:9,12:19:40.91:65,0,41	1/1:8,0:8:2.90:48,3,0	0/1:23,0:23:14.75:141,0,15	1/1:22,0:21:8.83:84,9,0	1/1:19,0:16:2.97:20,3,0	0/1:15,0:14:37.73:83,0,38
chr10	43537691	.	GAT	G	40.18	PASS	AB=0.816;AC=5;AF=0.093;AN=54;BaseQRankSum=3.909;DP=490;FS=24.712;HRun=0;HaplotypeScore=136.6532;InbreedingCoeff=0.1175;MQ=40.19;MQ0=23;MQRankSum=-3.164;QD=0.77;ReadPosRankSum=-1.703;VQSLOD=0.5209;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:5:2.60:0,3,13	0/1:5,0:4:0.91:5,0,1	./.	0/0:17,0:1:3.01:0,3,49	0/1:12,11:22:2.69:3,0,21	0/0:8,0:8:5.96:0,6,45	0/1:5,0:3:0:0,0,0	0/0:26,0:11:23.82:0,24,184	0/0:6,0:4:5.96:0,6,52	0/0:37,0:34:93.12:0,93,1408	0/0:24,0:20:13.44:0,13,175	0/0:22,0:18:1.46:0,1,179	0/0:17,0:14:19.06:0,19,268	0/0:12,0:12:7.02:0,7,238	0/1:8,3:11:40.33:40,0,52	0/1:3,5:8:13.72:85,0,14	0/0:17,0:17:31.92:0,32,477	0/0:12,0:11:33.06:0,33,536	0/0:11,0:11:33.11:0,33,540	0/0:30,0:27:29.46:0,29,427	0/0:9,0:7:6.60:0,7,154	0/0:33,0:31:51:0,51,771	0/0:26,0:23:21.33:0,21,359	0/0:12,0:12:21.11:0,21,275	0/0:28,0:27:30.32:0,30,406	0/0:27,0:25:71.36:0,71,1092	0/0:20,0:17:26.67:0,27,356	0/0:18,0:17:42.14:0,42,699
chr10	43537693	.	T	TA	856.80	PASS	AB=0.863;AC=20;AF=0.370;AN=54;BaseQRankSum=4.436;DP=481;FS=5.636;HRun=1;HaplotypeScore=128.9455;InbreedingCoeff=-0.0953;MQ=40.55;MQ0=22;MQRankSum=-3.415;QD=3.04;ReadPosRankSum=-1.199;VQSLOD=-0.4955;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:4,0:5:0.27:1,0,0	1/1:1,3:4:5.99:68,6,0	./.	0/0:15,0:1:3.01:0,3,42	0/0:20,2:22:5.24:0,5,57	0/1:5,2:8:17.43:42,0,17	0/1:3,0:3:0.05:0,0,0	0/0:25,0:11:24.07:0,24,299	1/1:1,5:4:6.02:77,6,0	0/1:23,12:33:99:248,0,728	0/0:16,8:20:16.75:0,17,195	1/1:13,6:20:24.45:164,24,0	0/1:14,1:15:21.91:95,0,22	0/1:12,0:12:34.03:34,0,152	0/1:10,1:11:15.04:15,0,44	0/1:8,0:8:18.63:19,0,67	0/0:17,0:18:6.55:0,7,223	0/0:11,1:11:33.11:0,33,453	0/0:9,1:10:18.51:0,19,342	0/1:21,8:26:62.42:62,0,269	0/0:8,0:7:9.03:0,9,126	0/1:28,4:30:86.30:86,0,408	0/0:24,1:22:16.55:0,17,250	0/1:10,2:12:29.09:29,0,194	0/1:18,9:26:35.08:35,0,279	0/1:25,2:26:14.59:15,0,804	0/1:14,4:15:23.80:24,0,275	0/0:18,0:17:42.07:0,42,541
chr10	43537709	.	G	GGATA	3613.37	PASS	AB=0.980;AC=26;AF=0.542;AN=48;BaseQRankSum=0.505;DP=492;FS=2.932;HRun=0;HaplotypeScore=137.8433;InbreedingCoeff=-0.2294;MQ=41.02;MQ0=23;MQRankSum=0.499;QD=9.19;ReadPosRankSum=-4.448;VQSLOD=1.7687;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	./.	0/0:7,0:6:3.88:0,4,19	./.	./.	0/1:16,0:17:0:0,0,0	0/1:9,0:9:0:0,0,0	0/1:6,0:5:0:0,0,0	./.	1/1:10,0:8:2.06:17,2,0	0/1:35,0:33:55.71:56,0,324	0/1:29,0:25:38.10:38,0,108	0/1:21,0:17:51.85:266,0,52	0/1:16,0:12:3.60:102,0,4	1/1:1,9:12:15.01:304,15,0	1/1:7,0:11:2.79:7,3,0	0/1:12,0:12:4.57:5,0,22	0/0:19,0:19:30.09:0,30,433	0/1:15,0:14:99:123,0,101	0/1:14,0:13:78.19:79,0,78	0/1:27,0:24:98:98,0,137	0/0:10,0:8:5.29:0,5,40	1/1:22,4:24:45.14:932,45,0	1/1:23,3:23:23.99:488,24,0	0/1:6,5:11:32.07:247,0,32	0/1:31,0:30:32.57:254,0,33	0/1:27,0:26:99:171,0,202	0/1:16,0:12:53.41:101,0,53	0/1:22,0:20:74.22:326,0,74
chr10	43537713	.	A	AGAG	230.73	PASS	AB=0.930;AC=10;AF=0.179;AN=56;BaseQRankSum=5.117;DP=484;FS=33.618;HRun=0;HaplotypeScore=139.3837;InbreedingCoeff=0.4008;MQ=41.80;MQ0=22;MQRankSum=0.135;QD=3.20;ReadPosRankSum=2.444;VQSLOD=1.2343;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:5:2.80:0,3,13	1/1:4,2:5:5.61:77,6,0	0/0:19,0:1:3.01:0,3,47	0/0:14,0:1:3.01:0,3,42	0/1:15,1:16:0.26:0,0,0	0/1:9,0:9:0.13:0,0,14	0/1:5,1:5:0:0,0,0	0/0:21,0:11:3.58:0,4,289	1/1:8,2:9:3.55:67,4,0	0/0:32,0:30:81.27:0,81,1368	0/0:27,0:23:14.65:0,15,239	0/0:20,0:16:28.23:0,28,358	0/0:19,0:15:14.84:0,15,267	0/0:13,0:13:3.44:0,3,52	1/1:12,0:12:2.20:48,2,0	0/1:11,1:12:99:153,0,133	0/0:19,0:19:16.40:0,16,590	0/0:15,0:14:39.12:0,39,594	0/0:13,0:12:36.11:0,36,578	0/0:25,0:22:32.76:0,33,485	0/0:8,0:6:14.92:0,15,219	0/0:26,0:24:10.02:0,10,115	0/0:24,0:21:7.75:0,8,116	0/0:11,0:11:6.70:0,7,118	0/0:31,0:30:36.06:0,36,488	0/0:30,0:29:84.20:0,84,1255	0/0:16,0:12:20.37:0,20,287	0/0:24,0:22:51.17:0,51,737
chr10	43537732	.	TAGATAGATAGATA	T	455.48	PASS	AB=0.891;AC=7;AF=0.125;AN=56;BaseQRankSum=3.892;DP=484;FS=33.581;HRun=0;HaplotypeScore=200.4981;InbreedingCoeff=0.1408;MQ=46.52;MQ0=14;MQRankSum=-1.041;QD=7.35;ReadPosRankSum=-3.494;VQSLOD=0.5431;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,0:6:1.82:5,2,0	0/0:7,0:6:17.03:0,17,145	0/0:7,0:4:12.04:0,12,211	0/0:9,0:2:6.02:0,6,121	0/1:8,1:8:0.04:0,0,0	0/0:9,0:8:17.20:0,17,176	0/0:3,0:3:4.56:0,5,32	0/1:14,0:6:15.50:23,0,15	0/1:12,0:11:17.90:18,0,194	0/0:34,0:32:63.99:0,64,3512	0/0:31,0:28:22.95:0,23,957	0/0:20,0:19:51.17:0,51,1623	0/0:20,0:17:39.13:0,39,1220	0/0:14,0:14:21.07:0,21,972	0/1:8,3:11:59.35:206,0,59	0/1:7,3:10:17.51:315,0,18	0/0:18,0:18:39.13:0,39,1960	0/0:18,0:17:40.80:0,41,1799	0/0:15,0:11:23.78:0,24,1153	0/0:24,0:22:37.70:0,38,1689	0/0:10,0:8:7.75:0,8,755	0/0:31,0:31:72.25:0,72,2972	0/0:19,0:17:29.96:0,30,1342	0/0:16,0:14:26.01:0,26,1148	0/0:34,0:33:36.12:0,36,1915	0/0:31,0:30:58.67:0,59,3671	0/0:23,0:20:21.11:0,21,1273	0/0:28,0:26:51.18:0,51,2855
chr10	43537745	.	A	AGAGT	8989.06	PASS	AB=0.988;AC=35;AF=0.625;AN=56;BaseQRankSum=-1.600;DP=519;FS=10.121;HRun=0;HaplotypeScore=148.7086;InbreedingCoeff=0.2570;MQ=52.36;MQ0=5;MQRankSum=-1.776;QD=21.10;ReadPosRankSum=2.922;VQSLOD=4.3426;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,0:7:2.90:29,3,0	1/1:7,0:6:14.91:124,15,0	0/0:13,0:11:5.88:0,6,283	0/0:14,0:10:19.62:0,20,265	0/1:9,0:8:0.02:0,0,0	0/1:9,0:8:56.80:94,0,57	0/0:5,0:5:3.01:0,3,32	1/1:23,0:15:42.14:581,42,0	0/1:15,0:15:9.54:155,0,10	1/1:11,27:36:81.23:1378,81,0	1/1:6,22:27:5.22:150,5,0	0/0:20,0:19:4.28:0,4,479	0/0:22,0:20:28.12:0,28,574	0/1:16,0:16:61.39:61,0,178	0/1:15,0:15:24.35:128,0,24	1/1:12,0:12:28.43:219,28,0	0/0:18,0:18:39.12:0,39,584	0/1:14,2:16:46.33:508,0,46	1/1:4,11:12:32.14:549,32,0	1/1:9,13:24:30.45:526,30,0	1/1:10,1:11:13.96:234,14,0	0/1:32,0:32:99:140,0,482	0/1:14,0:14:90.90:91,0,95	0/1:21,0:19:33.23:33,0,345	1/1:4,27:31:33.11:797,33,0	1/1:26,6:31:72.25:1391,72,0	1/1:18,3:21:41.99:704,42,0	1/1:7,22:28:45.15:1096,45,0
chr10	43537756	.	G	GTAGA	3018.41	PASS	AB=0.910;AC=19;AF=0.339;AN=56;BaseQRankSum=6.544;DP=551;FS=20.834;HRun=0;HaplotypeScore=185.4696;InbreedingCoeff=0.4328;MQ=51.60;MQ0=3;MQRankSum=-8.525;QD=14.65;ReadPosRankSum=3.427;VQSLOD=2.0306;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:3,6:8:14.92:96,0,15	1/1:2,3:6:15.05:403,15,0	0/0:18,0:15:35.94:0,36,578	0/0:20,0:13:36.01:0,36,564	0/1:7,3:9:0.08:0,0,0	1/1:5,6:10:20.99:455,21,0	1/1:7,2:9:5.82:26,6,0	0/1:27,0:22:99:112,0,109	1/1:9,8:17:26.91:611,27,0	0/0:35,0:33:47.45:0,47,635	0/0:28,0:26:1.17:0,1,57	0/0:26,0:25:60.14:0,60,1074	0/0:22,0:20:51.17:0,51,953	0/0:17,0:17:27.08:0,27,483	1/1:10,6:16:30.35:629,30,0	1/1:5,8:16:30.10:785,30,0	0/0:16,0:16:41.98:0,42,647	0/1:14,0:14:4.48:4,0,137	0/1:15,0:13:19:19,0,309	0/0:23,0:23:1.89:0,2,182	0/0:12,0:11:17.84:0,18,181	0/0:32,0:31:86.94:0,87,1320	0/0:14,0:14:33.06:0,33,512	0/0:26,0:24:42.01:0,42,744	0/1:31,0:31:14.06:49,0,14	0/0:30,0:30:7.75:0,8,490	0/0:26,0:25:18.07:0,18,407	0/1:25,0:25:13.99:14,0,42
chr10	43537778	.	GGATAGATA	G	2319.94	PASS	AB=0.890;AC=26;AF=0.500;AN=52;BaseQRankSum=4.298;DP=518;FS=0.754;HRun=0;HaplotypeScore=182.6260;InbreedingCoeff=0.6216;MQ=45.78;MQ0=5;MQRankSum=-5.817;QD=10.40;ReadPosRankSum=-0.290;VQSLOD=2.6760;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:10:2.97:23,3,0	1/1:6,0:6:2.97:20,3,0	./.	./.	0/0:9,0:9:2.99:0,3,25	1/1:8,0:8:2.62:53,3,0	1/1:8,0:7:1.77:5,2,0	0/0:46,0:36:1.82:0,2,5	1/1:14,0:21:24.07:362,24,0	1/1:22,2:25:12.04:244,12,0	0/1:19,3:20:0.10:0,0,0	0/0:27,0:26:36.12:0,36,1385	0/0:21,0:18:24.08:0,24,843	0/0:11,0:16:23.93:0,24,192	0/0:19,0:17:6.49:0,6,82	0/0:21,0:20:21.05:0,21,686	0/0:15,0:15:19.62:0,20,398	0/1:12,1:13:14.71:138,0,15	1/1:7,1:8:6.02:134,6,0	1/1:16,2:18:11.96:265,12,0	1/1:10,11:20:2.56:20,3,0	0/0:20,0:19:6.02:0,6,244	0/0:11,0:11:12:0,12,487	0/0:25,0:23:24.08:0,24,794	1/1:17,3:20:6:128,6,0	1/1:17,3:20:15.05:361,15,0	1/1:13,7:19:32.89:742,33,0	0/0:22,0:24:5.99:0,6,48
chr10	43537930	.	GGATA	G	883.38	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-2.073;DP=570;FS=0.768;HRun=0;HaplotypeScore=110.2885;InbreedingCoeff=0.9586;MQ=56.07;MQ0=4;MQRankSum=-2.645;QD=30.46;ReadPosRankSum=-2.978;VQSLOD=3.0571;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:18:33.09:0,33,617	0/0:11,0:11:30.10:0,30,645	0/0:33,0:24:52.40:0,52,1068	0/0:24,0:17:21.13:0,21,574	0/0:23,0:23:26.74:0,27,531	0/0:24,0:24:66.14:0,66,1389	0/0:8,0:8:18.06:0,18,418	1/1:24,5:28:66.13:978,66,0	0/0:27,0:27:69.24:0,69,1611	0/0:27,0:27:78.19:0,78,1678	0/0:15,0:14:30.09:0,30,592	0/0:24,0:24:59.85:0,60,1370	0/0:19,0:19:51.17:0,51,1180	0/0:16,0:16:42.13:0,42,989	0/0:27,0:25:54.03:0,54,1027	0/0:19,0:19:51.11:0,51,1133	0/0:11,0:11:27.05:0,27,580	0/0:10,0:10:18.49:0,18,565	0/0:22,0:20:45.15:0,45,1001	0/0:31,0:31:54.16:0,54,1111	0/0:41,0:41:99:0,102,2262	0/0:10,0:10:20.66:0,21,454	0/0:16,0:16:36.11:0,36,787	0/0:21,0:21:60.19:0,60,1348	0/0:19,0:19:42.14:0,42,849	0/0:20,0:20:54.12:0,54,1120	0/0:19,0:19:51.04:0,51,963	0/0:5,0:5:15.02:0,15,279
chr10	43538088	.	CT	C	2580.73	PASS	AB=0.917;AC=17;AF=0.304;AN=56;BaseQRankSum=8.162;DP=515;FS=4.368;HRun=10;HaplotypeScore=61.8063;InbreedingCoeff=0.8897;MQ=66.35;MQ0=1;MQRankSum=-0.717;QD=18.84;ReadPosRankSum=2.683;VQSLOD=4.6279;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,18:23:58.79:497,59,0	1/1:1,8:9:20.99:182,21,0	0/0:22,1:19:21.80:0,22,435	0/1:10,0:7:17.19:17,0,57	1/1:1,19:20:44.98:391,45,0	1/1:3,22:25:65.98:573,66,0	1/1:1,9:9:26.99:232,27,0	0/0:8,1:26:18.12:0,18,211	1/1:1,13:14:38.99:339,39,0	0/0:26,2:27:23.08:0,23,708	0/0:35,0:36:99:0,99,1062	0/0:14,0:14:36.08:0,36,389	0/0:10,0:10:24.06:0,24,266	0/0:12,0:12:27.51:0,28,287	1/1:2,12:15:39.74:323,40,0	1/1:0,10:10:26.99:234,27,0	0/0:15,0:15:21.11:0,21,233	0/0:13,0:13:28.19:0,28,283	0/0:25,0:25:66.16:0,66,717	0/0:15,1:15:4.02:0,4,273	0/0:15,0:15:42.11:0,42,464	0/0:20,0:20:51.13:0,51,557	0/0:19,0:19:45.10:0,45,482	0/0:16,0:16:39.10:0,39,421	0/0:20,0:20:50.89:0,51,512	0/0:19,0:19:42.10:0,42,457	0/0:22,0:22:63.05:0,63,668	0/0:28,0:28:75.17:0,75,817
chr10	43538323	.	AGTTTG	A	5794.43	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=12.881;DP=658;FS=4.868;HRun=0;HaplotypeScore=125.5080;InbreedingCoeff=0.9865;MQ=76.76;MQ0=4;MQRankSum=-1.849;QD=30.82;ReadPosRankSum=1.981;VQSLOD=4.6886;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,28:30:57.19:1053,57,0	1/1:5,10:15:21.07:397,21,0	0/0:47,0:39:56.34:0,56,1383	0/0:35,0:30:8.89:0,9,620	1/1:9,18:27:45.02:748,45,0	1/1:4,17:21:36.12:680,36,0	1/1:7,9:16:15.05:283,15,0	1/1:10,17:27:51.13:787,51,0	1/1:3,11:14:30.10:542,30,0	0/0:44,0:44:99:0,113,2974	0/0:29,0:29:66.23:0,66,1784	0/0:18,0:18:45.15:0,45,1224	0/0:12,0:12:21.07:0,21,596	0/0:20,0:20:42.13:0,42,1135	1/1:4,13:17:33.11:624,33,0	1/1:4,17:21:35.87:680,36,0	0/0:20,0:20:39.13:0,39,1112	0/0:18,0:18:36.10:0,36,945	0/0:18,0:17:27.09:0,27,632	0/0:23,0:23:60.19:0,60,1602	0/0:26,0:26:63.19:0,63,1472	0/0:25,0:25:63.21:0,63,1656	0/0:20,0:20:39.12:0,39,991	0/0:26,0:25:70.44:0,70,1860	0/0:21,0:21:48.16:0,48,1331	0/0:24,0:24:63.22:0,63,1696	0/0:20,0:20:45.14:0,45,1201	0/0:24,0:24:51.18:0,51,1454
chr10	43538694	.	A	AC	3574.90	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-13.340;DP=725;FS=3.466;HRun=6;HaplotypeScore=99.8320;InbreedingCoeff=0.9282;MQ=76.05;MQ0=5;MQRankSum=-0.516;QD=26.48;ReadPosRankSum=1.424;VQSLOD=3.7388;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:9,40:48:99:1347,108,0	1/1:1,5:6:12.04:151,12,0	0/0:38,0:29:58.70:0,59,577	0/0:46,0:42:99:0,105,972	0/0:27,0:27:72.44:0,72,419	1/1:3,13:16:39.12:491,39,0	1/1:7,32:38:70.78:871,71,0	0/0:27,0:27:59.81:0,60,549	1/1:2,23:25:57.18:716,57,0	0/0:29,0:28:71.88:0,72,365	0/0:13,0:13:27.38:0,27,151	0/0:31,0:31:84.15:0,84,841	0/0:12,0:12:30.07:0,30,306	0/0:18,0:18:51.11:0,51,519	0/0:28,0:28:71.42:0,71,361	0/0:19,1:20:18.51:0,19,226	0/0:31,0:31:87.17:0,87,878	0/0:15,0:15:36.93:0,37,191	0/0:31,0:30:2.70:0,3,267	0/0:27,0:27:71.10:0,71,388	0/0:55,0:55:99:0,114,640	0/0:21,0:21:54.10:0,54,542	0/0:15,0:15:38.93:0,39,362	0/0:23,0:23:60.12:0,60,606	0/0:24,0:24:6.99:0,7,222	0/0:26,0:26:67.87:0,68,324	0/0:13,0:13:28.40:0,28,162	0/0:20,0:20:17.23:0,17,206
chr10	43540099	.	T	TATAC	1206.10	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-6.406;DP=652;FS=7.816;HRun=0;HaplotypeScore=109.7073;InbreedingCoeff=0.8708;MQ=70.54;MQ0=1;MQRankSum=-3.077;QD=37.69;ReadPosRankSum=-4.573;VQSLOD=1.8290;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:84.25:0,84,1335	0/0:3,0:3:9.03:0,9,138	0/0:16,0:13:7.93:0,8,180	0/0:24,0:21:15.42:0,15,281	0/0:24,0:24:63.11:0,63,899	0/0:19,0:19:45.14:0,45,722	0/0:24,0:24:48.08:0,48,672	1/1:8,24:32:72.07:1301,72,0	0/0:27,0:27:66.17:0,66,1021	0/0:29,0:29:72.25:0,72,1195	0/0:22,0:22:60.19:0,60,975	0/0:26,0:26:60.14:0,60,900	0/0:13,0:13:36.12:0,36,603	0/0:26,0:26:66.21:0,66,1086	0/0:26,0:25:72.21:0,72,1136	0/0:16,0:16:42.12:0,42,652	0/0:38,0:38:93.21:0,93,1396	0/0:15,0:15:39.09:0,39,617	0/0:21,0:21:36.10:0,36,553	0/0:15,0:15:39.12:0,39,630	0/0:41,0:41:99:0,99,1554	0/0:33,0:33:93.30:0,93,1547	0/0:12,0:12:33.10:0,33,528	0/0:19,0:19:42.11:0,42,658	0/0:34,0:34:81.20:0,81,1231	0/0:22,0:22:63.13:0,63,845	0/0:22,0:22:57.14:0,57,900	0/0:9,0:9:24.06:0,24,362
chr10	43540582	.	AAC	A	1082.02	PASS	AB=0.934;AC=28;AF=0.583;AN=48;BaseQRankSum=1.838;DP=542;FS=8.788;HRun=0;HaplotypeScore=83.0798;InbreedingCoeff=0.2617;MQ=65.74;MQ0=8;MQRankSum=1.006;QD=3.12;ReadPosRankSum=3.745;VQSLOD=0.7653;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:6.95:0,7,82	0/0:7,0:7:9.03:0,9,109	./.	./.	0/0:21,0:20:9.03:0,9,128	0/0:17,0:17:11.69:0,12,79	0/1:24,0:21:15.28:44,0,15	0/0:16,0:16:4.21:0,4,23	0/0:11,0:11:3.77:0,4,26	1/1:23,0:23:10.63:82,11,0	1/1:5,1:6:3.01:32,3,0	0/0:16,0:16:5.99:0,6,78	0/1:12,2:14:71.39:71,0,197	0/1:7,2:9:23.23:23,0,67	1/1:13,0:18:2.44:13,2,0	1/1:16,0:22:7.03:38,7,0	1/1:27,4:32:23.14:253,23,0	1/1:16,3:20:17.77:159,18,0	1/1:18,0:17:5.85:46,6,0	1/1:10,3:13:6.02:64,6,0	1/1:47,4:50:26.43:211,26,0	0/1:19,0:19:11.58:12,0,204	0/1:13,0:13:5.50:6,0,74	0/1:36,4:40:60.64:61,0,331	./.	./.	1/1:9,1:9:3.01:32,3,0	1/1:8,0:8:9.02:96,9,0
chr10	43540625	.	A	AC	457.99	PASS	AB=0.551;AC=8;AF=0.143;AN=56;BaseQRankSum=3.721;DP=697;FS=2.668;HRun=1;HaplotypeScore=89.9660;InbreedingCoeff=0.5437;MQ=51.40;MQ0=55;MQRankSum=-2.382;QD=3.69;ReadPosRankSum=-2.643;VQSLOD=-0.6295;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,33:34:4.31:288,4,0	0/1:3,2:14:16.42:16,0,66	0/0:37,0:7:7.98:0,8,117	0/0:44,0:8:24.07:0,24,291	0/0:20,0:17:39.12:0,39,496	0/1:4,6:19:46.02:82,0,46	1/1:3,29:23:3.05:65,3,0	0/0:16,0:15:39.04:0,39,439	1/1:3,11:15:14.02:140,14,0	0/0:24,0:23:53.70:0,54,582	0/0:12,0:11:21:0,21,246	0/0:25,0:25:61.90:0,62,784	0/0:24,0:24:46.63:0,47,775	0/0:24,0:24:52.01:0,52,635	0/0:17,0:16:26.33:0,26,383	0/0:14,0:13:5.54:0,6,199	0/0:33,1:34:55.88:0,56,844	0/0:22,0:22:20.91:0,21,563	0/0:29,0:26:37.76:0,38,538	0/0:18,0:18:41.14:0,41,483	0/0:81,2:77:74.15:0,74,1743	0/0:24,0:24:13.53:0,14,590	0/0:11,0:11:21.07:0,21,263	0/0:28,0:28:64.95:0,65,754	0/0:14,0:12:27.09:0,27,342	0/0:23,0:22:58.42:0,58,713	0/0:15,0:14:30.71:0,31,394	0/0:14,0:13:22:0,22,243
chr10	43540962	.	T	TG	678.34	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.300;DP=656;FS=3.679;HRun=2;HaplotypeScore=77.4279;InbreedingCoeff=0.9978;MQ=68.02;MQ0=2;MQRankSum=-0.010;QD=22.61;ReadPosRankSum=-4.592;VQSLOD=2.2855;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,107,1278	0/0:10,0:9:27.07:0,27,321	0/0:52,0:34:74.45:0,74,808	0/0:39,0:23:52.99:0,53,524	0/0:19,0:19:57.18:0,57,706	0/0:22,0:22:63.13:0,63,739	0/0:18,0:18:51.14:0,51,608	1/1:3,27:30:74.24:773,74,0	0/0:24,0:24:72.18:0,72,863	0/0:27,0:27:78.11:0,78,880	0/0:20,0:20:58.05:0,58,695	0/0:18,0:18:54.17:0,54,666	0/0:18,0:18:51.01:0,51,581	0/0:14,0:14:42.10:0,42,486	0/0:26,0:26:72.21:0,72,879	0/0:12,0:12:36.11:0,36,446	0/0:39,0:39:99:0,107,1321	0/0:24,0:24:63.06:0,63,714	0/0:19,0:19:57.17:0,57,696	0/0:24,0:24:69.20:0,69,841	0/0:26,0:26:72.22:0,72,881	0/0:14,0:14:42.13:0,42,520	0/0:10,0:10:27.08:0,27,329	0/0:26,0:26:72.20:0,72,875	0/0:18,0:18:54.04:0,54,646	0/0:25,0:25:66.18:0,66,794	0/0:28,0:28:84.25:0,84,1028	0/0:16,0:16:45.14:0,45,557
chr10	43541256	.	AT	A	4041.01	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-1.654;DP=355;FS=4.789;HRun=10;HaplotypeScore=44.4399;InbreedingCoeff=0.8068;MQ=75.48;MQ0=3;MQRankSum=-0.145;QD=15.72;ReadPosRankSum=1.001;VQSLOD=3.5772;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,23:23:47.98:416,48,0	1/1:0,1:1:3:26,3,0	0/0:14,0:10:0.09:0,0,59	0/0:16,0:12:14.04:0,14,116	1/1:0,9:9:21:182,21,0	1/1:0,17:17:47.99:417,48,0	1/1:2,6:8:12:104,12,0	1/1:5,0:31:44.99:132,45,0	1/1:1,7:8:14.99:130,15,0	1/1:2,4:6:11.99:104,12,0	1/1:0,14:14:38.99:338,39,0	0/0:0,0:4:5.68:0,6,28	0/0:2,0:9:14.36:0,14,83	0/0:0,0:6:8.52:0,9,43	1/1:1,4:5:9:78,9,0	1/1:2,5:7:9:78,9,0	0/0:25,0:24:61.94:0,62,655	1/1:3,24:27:65.48:555,65,0	1/1:10,14:22:11.80:330,12,0	1/1:3,8:11:17.99:156,18,0	1/1:0,8:8:20.99:182,21,0	0/0:3,0:3:4.40:0,4,17	0/0:1,0:5:5.74:0,6,31	0/0:3,0:15:28.47:0,28,144	1/1:3,10:13:14.97:129,15,0	1/1:3,18:19:47.92:416,48,0	1/1:4,7:11:8.98:78,9,0	1/1:0,12:13:23.03:188,23,0
chr10	43541366	.	ATTTTATT	A	600.28	PASS	AB=1.000;AC=7;AF=0.130;AN=54;BaseQRankSum=5.979;DP=251;FS=0.895;HRun=0;HaplotypeScore=54.4010;InbreedingCoeff=0.4130;MQ=65.44;MQ0=6;MQRankSum=-2.448;QD=20.01;ReadPosRankSum=-2.344;VQSLOD=2.3495;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:57.19:0,57,1759	0/0:3,0:3:9.01:0,9,106	0/0:17,0:9:23.28:0,23,332	0/0:40,0:11:20.82:0,21,343	0/1:6,0:6:6.56:7,0,89	0/0:5,0:5:6.02:0,6,233	0/0:3,0:3:3.01:0,3,110	1/1:5,16:21:48.16:689,48,0	0/0:3,0:3:9.03:0,9,192	0/0:3,0:3:6.02:0,6,233	0/0:4,0:4:9.03:0,9,200	0/0:3,0:3:3.01:0,3,116	0/0:2,0:2:6.02:0,6,170	0/0:5,0:5:12.04:0,12,320	1/1:1,0:1:1.25:3,1,0	1/1:2,0:2:2.74:12,3,0	0/0:29,0:29:66.21:0,66,2158	0/0:26,0:26:66.19:0,66,2138	0/0:13,0:13:27.09:0,27,752	0/0:3,0:3:3.01:0,3,115	0/0:4,0:4:6.02:0,6,157	./.	0/0:5,0:5:6.02:0,6,180	0/0:5,0:4:12.04:0,12,384	0/0:5,0:5:12.04:0,12,391	0/0:10,0:10:27.09:0,27,922	0/0:6,0:6:12.04:0,12,415	0/0:5,0:5:15.05:0,15,578
chr10	43541569	.	CCT	C	654.02	PASS	AB=0.583;AC=1;AF=0.019;AN=54;BaseQRankSum=6.092;DP=425;FS=15.437;HRun=0;HaplotypeScore=50.4814;InbreedingCoeff=-0.0313;MQ=56.07;MQ0=9;MQRankSum=-1.741;QD=23.36;ReadPosRankSum=-4.336;VQSLOD=1.3538;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:72.25:0,72,1461	0/0:2,0:2:6.02:0,6,105	0/0:11,0:6:18.06:0,18,353	0/0:14,0:10:20.28:0,20,372	0/0:10,0:10:24.08:0,24,487	0/0:14,0:14:30.09:0,30,574	0/0:20,0:18:51.13:0,51,924	0/1:8,20:24:99:728,0,116	0/0:19,0:19:54.14:0,54,1023	0/0:9,0:8:24.08:0,24,488	0/0:6,0:6:18.06:0,18,366	0/0:16,0:16:36.07:0,36,656	0/0:5,0:5:15.05:0,15,305	0/0:9,0:9:27.08:0,27,515	0/0:18,0:17:42.13:0,42,785	0/0:7,0:7:18.06:0,18,366	0/0:32,0:31:75:0,75,1499	0/0:20,0:19:45.15:0,45,914	0/0:27,0:23:69.21:0,69,1346	0/0:4,0:4:9.03:0,9,183	0/0:37,0:36:96.29:0,96,1885	./.	0/0:2,0:2:6.02:0,6,122	0/0:26,0:25:66.22:0,66,1306	0/0:7,0:7:14.63:0,15,304	0/0:19,0:19:57.20:0,57,1158	0/0:14,0:14:39.13:0,39,775	0/0:13,0:13:39.13:0,39,746
chr10	43541730	.	T	TA	720.26	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-1.030;DP=326;FS=1.768;HRun=3;HaplotypeScore=43.8553;InbreedingCoeff=0.6854;MQ=71.92;MQ0=0;MQRankSum=1.018;QD=25.72;ReadPosRankSum=-4.472;VQSLOD=1.7865;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:80.95:0,81,850	0/0:5,0:4:12.03:0,12,134	0/0:12,0:11:12.36:0,12,132	0/0:4,0:3:5.92:0,6,52	0/0:13,0:13:33.04:0,33,348	0/0:12,0:12:18.03:0,18,191	0/0:9,0:9:24.07:0,24,286	1/1:4,24:28:73.32:815,73,0	0/0:4,0:4:9.01:0,9,96	0/0:10,0:10:30.09:0,30,358	0/0:12,0:12:30.08:0,30,349	0/0:8,0:8:23.42:0,23,239	0/0:8,0:8:21.03:0,21,226	0/0:6,0:6:18.04:0,18,203	0/0:10,0:10:21.02:0,21,215	0/0:9,0:9:23.93:0,24,255	0/0:26,0:26:66.02:0,66,727	0/0:16,0:16:45.03:0,45,504	0/0:18,0:18:39.64:0,40,459	0/0:3,0:3:8.68:0,9,71	0/0:7,0:7:21.05:0,21,239	0/0:4,0:4:12.04:0,12,144	0/0:7,0:7:11.91:0,12,124	0/0:4,0:4:9.01:0,9,96	0/0:12,0:12:30.09:0,30,358	0/0:20,0:20:60.16:0,60,693	0/0:16,0:15:31.25:0,31,373	0/0:10,0:10:30.09:0,30,358
chr10	43541778	.	A	AT	1857.40	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=3.272;DP=352;FS=17.636;HRun=7;HaplotypeScore=41.3347;InbreedingCoeff=0.8747;MQ=62.04;MQ0=7;MQRankSum=-2.208;QD=18.03;ReadPosRankSum=3.002;VQSLOD=2.0422;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:12,12:25:53.82:587,54,0	1/1:0,5:4:9.03:108,9,0	0/0:29,0:6:14.63:0,15,89	0/0:23,0:8:11.42:0,11,91	1/1:6,5:11:24.07:283,24,0	1/1:1,11:13:12.04:144,12,0	1/1:3,3:5:6.02:72,6,0	1/1:18,7:25:38.99:402,39,0	1/1:1,0:1:3.01:36,3,0	0/0:10,0:10:27.04:0,27,257	0/0:11,0:10:24.04:0,24,231	0/0:8,0:8:20.66:0,21,189	0/0:8,0:7:14.94:0,15,131	0/0:7,0:7:20.99:0,21,185	1/1:0,8:8:18.05:214,18,0	1/1:4,2:6:18.05:210,18,0	0/0:28,0:28:46.06:0,46,549	0/0:27,0:26:74.86:0,75,682	0/0:20,1:20:37.24:0,37,415	0/0:7,0:7:19.27:0,19,176	0/0:5,0:4:6.01:0,6,57	0/0:1,0:1:3:0,3,29	0/0:7,0:7:12.02:0,12,115	0/0:5,0:5:15.02:0,15,145	0/0:13,0:13:33.05:0,33,316	0/0:13,0:13:36.05:0,36,343	0/0:15,0:13:32.10:0,32,305	0/0:11,0:10:24.03:0,24,231
chr10	43541786	.	C	CT	660.78	PASS	AB=0.912;AC=14;AF=0.269;AN=52;BaseQRankSum=5.783;DP=356;FS=9.705;HRun=13;HaplotypeScore=49.3825;InbreedingCoeff=0.3559;MQ=60.47;MQ0=11;MQRankSum=-1.563;QD=4.65;ReadPosRankSum=-1.653;VQSLOD=0.3194;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:13,12:25:5.12:278,5,0	0/1:3,1:3:8.70:22,0,9	./.	0/0:22,0:7:5.01:0,5,27	1/1:11,4:13:16.26:140,16,0	1/1:11,3:14:4.20:96,4,0	0/0:5,0:3:5.75:0,6,31	0/1:16,3:18:8.95:75,0,9	./.	0/0:8,0:9:16.89:0,17,109	0/0:12,0:10:19.85:0,20,129	0/0:8,0:9:6.68:0,7,45	0/0:9,0:8:16.39:0,16,106	0/0:5,0:6:16.89:0,17,107	1/1:5,5:10:19.24:162,19,0	0/1:6,0:7:5.07:17,0,5	0/0:21,0:25:46.70:0,47,265	0/1:26,2:27:8.22:8,0,240	0/1:17,0:18:16.03:16,0,89	0/0:5,0:9:17.96:0,18,100	0/0:3,0:2:5.01:0,5,26	0/1:1,0:1:0:0,0,0	0/0:7,0:8:4.10:0,4,23	0/0:7,0:7:17.80:0,18,123	0/0:11,0:13:12.91:0,13,73	0/0:15,0:16:24.75:0,25,143	0/0:15,1:14:2.70:0,3,147	0/0:10,2:11:8.35:0,8,60
chr10	43542762	.	A	ACGCACG	660.74	PASS	AB=0.960;AC=12;AF=0.231;AN=52;BaseQRankSum=1.329;DP=640;FS=16.254;HRun=0;HaplotypeScore=200.5089;InbreedingCoeff=0.5961;MQ=44.70;MQ0=21;MQRankSum=-3.315;QD=4.65;ReadPosRankSum=-1.197;VQSLOD=1.1777;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,2:27:1.77:0,2,5	1/1:2,8:10:3.01:104,3,0	./.	./.	0/0:22,1:23:1.36:0,1,4	0/1:21,2:22:12.02:41,0,12	1/1:30,0:30:9.40:364,9,0	0/1:25,0:14:4.08:4,0,305	1/1:22,0:22:12:164,12,0	0/0:25,0:24:61.23:0,61,676	0/0:19,0:19:25.52:0,26,276	0/0:25,0:24:57.19:0,57,1078	0/0:25,0:24:65.99:0,66,1107	0/0:24,0:22:45.14:0,45,916	1/1:9,10:21:0.91:97,1,0	1/1:9,1:10:2.86:29,3,0	0/0:27,0:27:70.78:0,71,1387	0/0:19,0:16:25.39:0,25,421	0/0:20,0:18:43.20:0,43,462	0/0:18,0:17:14.83:0,15,181	0/0:52,0:51:30.43:0,30,384	0/0:22,0:22:60.08:0,60,1236	0/0:18,0:17:44.85:0,45,777	0/0:43,0:41:83.94:0,84,1641	0/0:20,0:19:14.97:0,15,233	0/0:29,0:25:61.76:0,62,668	0/0:16,0:15:32.44:0,32,347	0/0:16,0:15:23.23:0,23,342
chr10	43542767	.	CACAT	C	892.98	PASS	AB=0.955;AC=23;AF=0.442;AN=52;BaseQRankSum=6.105;DP=617;FS=1.053;HRun=0;HaplotypeScore=180.6875;InbreedingCoeff=0.0523;MQ=44.58;MQ0=22;MQRankSum=-4.693;QD=2.54;ReadPosRankSum=-1.971;VQSLOD=2.4650;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:22,3:24:0.50:2,1,0	1/1:9,1:10:2.68:18,3,0	./.	./.	0/1:18,7:25:0:0,0,0	0/1:14,9:22:9.88:17,0,10	1/1:18,8:26:17.57:268,18,0	0/1:24,0:13:15.18:15,0,192	1/1:17,5:22:3.15:91,3,0	0/1:26,0:24:99:107,0,124	0/1:19,0:19:20.51:113,0,21	0/0:25,0:24:56.71:0,57,864	0/0:27,0:26:52.78:0,53,840	0/0:21,0:19:41.97:0,42,718	1/1:12,7:18:6.51:38,7,0	1/1:6,4:10:3.90:59,4,0	0/0:28,0:28:49.31:0,49,1147	0/1:20,0:17:60.21:64,0,60	0/1:21,0:19:64.19:64,0,139	0/1:16,0:15:26.88:47,0,27	0/0:48,0:47:6.84:0,7,148	0/0:23,0:23:57.17:0,57,951	0/0:16,0:15:38.98:0,39,654	0/0:41,0:39:59.16:0,59,1364	0/1:20,0:19:41.88:43,0,42	0/1:29,0:25:80.97:81,0,167	0/1:17,0:16:25.09:25,0,126	0/0:16,0:15:15.72:0,16,133
chr10	43542770	.	ATG	A	2938.08	PASS	AB=0.805;AC=33;AF=0.635;AN=52;BaseQRankSum=7.058;DP=603;FS=8.817;HRun=0;HaplotypeScore=159.8894;InbreedingCoeff=0.5230;MQ=45.07;MQ0=20;MQRankSum=-3.742;QD=7.05;ReadPosRankSum=-1.237;VQSLOD=2.4227;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:20,3:22:0.47:1,0,0	1/1:9,0:9:2.58:16,3,0	./.	./.	0/1:10,15:25:0.19:0,0,0	0/0:13,9:21:3.36:0,3,11	1/1:23,3:26:18.47:195,18,0	0/1:22,2:13:53.32:53,0,172	1/1:8,14:22:20.80:219,21,0	0/1:9,16:23:1.10:500,0,1	1/1:15,4:19:20.72:317,21,0	0/0:24,1:24:53.49:0,53,863	0/1:28,1:28:20.57:21,0,847	0/0:23,0:21:48:0,48,735	1/1:18,1:18:6.44:61,6,0	1/1:9,1:10:3.01:44,3,0	0/0:26,0:26:35.24:0,35,897	1/1:15,3:15:3.89:256,4,0	0/1:16,2:16:99:241,0,129	1/1:13,3:15:10.19:135,10,0	1/1:20,29:48:12.37:79,12,0	0/0:22,0:22:31.98:0,32,624	0/0:15,0:14:35.91:0,36,567	0/0:38,3:39:29.22:0,29,1000	1/1:14,6:19:17.24:172,17,0	1/1:27,4:27:24.95:474,25,0	1/1:13,5:17:20.85:190,21,0	1/1:15,1:15:16.25:140,16,0
chr10	43542772	.	GCACA	G	2158.38	PASS	AB=0.814;AC=23;AF=0.426;AN=54;BaseQRankSum=2.741;DP=616;FS=13.065;HRun=0;HaplotypeScore=175.0368;InbreedingCoeff=0.0481;MQ=45.16;MQ0=20;MQRankSum=-1.449;QD=5.59;ReadPosRankSum=-4.790;VQSLOD=0.3927;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:23:0.27:2,0,0	0/0:10,0:10:0.89:0,1,2	0/0:3,0:1:3.01:0,3,43	./.	0/1:26,0:26:0:0,0,0	0/0:18,0:21:2.84:0,3,15	1/1:25,0:28:1.02:4,1,0	0/0:26,0:15:1.32:0,1,38	0/1:18,0:22:1.65:2,0,29	0/1:22,3:23:42.85:261,0,43	1/1:17,2:19:0.31:95,0,0	0/0:24,0:23:50.82:0,51,1115	0/0:30,0:30:66.28:0,66,1293	0/0:21,0:21:34.93:0,35,764	0/1:20,0:19:4.70:5,0,35	1/1:11,0:11:0.89:2,1,0	0/0:25,0:26:55.98:0,56,1028	0/1:12,6:15:31.02:59,0,31	0/1:14,5:17:10.69:138,0,11	1/1:8,7:15:5.87:99,6,0	1/1:40,9:49:30.08:465,30,0	0/1:21,0:23:5.41:5,0,542	0/0:12,0:14:32.33:0,32,610	0/0:36,0:41:53.91:0,54,1062	0/1:17,1:18:38.95:134,0,39	0/1:16,15:27:4.45:505,0,4	0/1:8,11:18:57.59:270,0,58	0/1:4,10:15:17.84:255,0,18
chr10	43542778	.	A	ACACACACACG	698.33	PASS	AB=0.985;AC=14;AF=0.259;AN=54;BaseQRankSum=6.444;DP=646;FS=4.210;HRun=0;HaplotypeScore=228.1625;InbreedingCoeff=0.3567;MQ=45.38;MQ0=19;MQRankSum=-5.123;QD=2.96;ReadPosRankSum=0.315;VQSLOD=2.3461;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:15,8:28:1.24:0,1,3	1/1:9,0:9:6.02:142,6,0	0/0:8,0:2:6:0,6,66	0/0:10,0:2:2.99:0,3,24	0/1:26,0:26:0:0,0,0	0/0:22,0:22:0.88:0,1,2	1/1:27,0:27:5.41:33,5,0	0/0:26,0:16:18.39:0,18,112	1/1:24,0:25:23.93:361,24,0	0/0:26,0:25:14.61:0,15,210	0/1:18,0:19:16.45:16,0,64	0/0:25,0:24:56.89:0,57,1419	0/0:31,0:30:68.29:0,68,1452	0/0:23,0:21:43.35:0,43,947	1/1:19,0:18:14.60:221,15,0	./.	0/0:27,0:27:68.92:0,69,1421	0/0:19,0:16:3.51:0,4,132	0/1:22,0:20:35.94:36,0,151	0/0:15,0:15:6:0,6,87	0/1:52,0:51:1.81:2,0,312	0/0:24,0:23:49.09:0,49,877	0/0:16,0:16:41.58:0,42,826	0/0:42,0:40:57.78:0,58,1278	0/1:20,0:19:18.80:19,0,116	0/0:31,0:27:17.44:0,17,307	0/0:19,0:18:10.01:0,10,152	0/1:16,0:15:20.46:20,0,137
chr10	43542786	.	A	ACGCACGCACG	914.34	PASS	AB=1.000;AC=10;AF=0.179;AN=56;BaseQRankSum=0.298;DP=648;FS=7.745;HRun=0;HaplotypeScore=220.7973;InbreedingCoeff=0.6718;MQ=45.87;MQ0=19;MQRankSum=-2.136;QD=7.14;ReadPosRankSum=-1.043;VQSLOD=1.2734;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:0.47:0,0,1	1/1:9,0:9:5.99:148,6,0	0/0:12,0:3:9.03:0,9,205	0/0:12,0:7:15.59:0,16,327	0/1:24,0:24:0:0,0,1	1/1:19,0:19:2.81:25,3,0	1/1:13,15:35:4.31:66,4,0	0/0:24,0:16:35.85:0,36,427	1/1:22,0:22:12.34:620,12,0	0/0:29,0:26:66.87:0,67,908	0/0:20,0:19:26.89:0,27,415	0/0:24,0:23:57.18:0,57,1712	0/0:32,0:31:83.92:0,84,2206	0/0:24,0:21:48.16:0,48,1367	0/1:19,0:18:6.83:191,0,7	0/0:15,0:15:0:0,0,0	0/0:27,0:27:73.46:0,73,1909	0/0:22,0:19:35.51:0,36,431	0/0:23,0:21:62.15:0,62,832	0/0:12,0:12:9.03:0,9,197	0/0:52,0:50:47.22:0,47,905	0/0:20,0:19:51.12:0,51,1255	0/0:18,0:17:45.09:0,45,1231	0/0:37,0:35:72.22:0,72,1953	0/0:20,0:20:23.97:0,24,416	0/0:30,0:26:71.87:0,72,1124	0/0:19,0:18:29.73:0,30,556	0/0:17,0:16:33.03:0,33,549
chr10	43543014	.	C	CAA	339.60	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=1.461;DP=627;FS=5.787;HRun=3;HaplotypeScore=73.7302;InbreedingCoeff=0.9207;MQ=65.89;MQ0=0;MQRankSum=0.751;QD=28.30;ReadPosRankSum=-4.454;VQSLOD=1.4564;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,120,1744	0/0:5,0:6:7.28:0,7,210	0/0:18,0:14:32.10:0,32,457	0/0:20,0:20:28.51:0,29,537	0/0:31,0:31:90.30:0,90,1318	0/0:24,0:24:60.20:0,60,873	0/0:27,0:27:75.24:0,75,1084	1/1:1,11:11:30.06:434,30,0	0/0:23,0:23:66.20:0,66,931	0/0:30,0:30:90.30:0,90,1322	0/0:22,0:22:65.87:0,66,915	0/0:12,0:12:36.12:0,36,527	0/0:18,0:18:54.13:0,54,749	0/0:18,0:18:51.17:0,51,740	0/0:23,0:23:69.23:0,69,1013	0/0:16,0:16:48.16:0,48,706	0/0:36,0:36:99:0,105,1542	0/0:18,0:18:48.02:0,48,699	0/0:22,0:22:63.21:0,63,917	0/0:18,0:18:51.13:0,51,707	0/0:16,0:16:42.13:0,42,595	0/0:27,0:27:69.23:0,69,1010	0/0:17,0:17:51.17:0,51,745	0/0:35,0:35:99:0,105,1541	0/0:21,0:21:63.21:0,63,926	0/0:39,0:39:99:0,117,1697	0/0:29,0:29:81.27:0,81,1187	0/0:8,0:8:24.04:0,24,309
chr10	43543143	.	TGC	T	142.10	PASS	AB=0.733;AC=1;AF=0.018;AN=56;BaseQRankSum=4.072;DP=606;FS=0.000;HRun=0;HaplotypeScore=101.0512;InbreedingCoeff=-0.0193;MQ=66.91;MQ0=0;MQRankSum=-4.023;QD=6.46;ReadPosRankSum=-1.293;VQSLOD=2.9588;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:65.03:0,65,1190	0/0:11,0:11:33.10:0,33,591	0/0:30,0:26:75.25:0,75,1326	0/0:13,0:12:12.12:0,12,483	0/0:25,0:25:75.26:0,75,1379	0/0:21,0:21:60.21:0,60,1135	0/0:23,0:23:69.24:0,69,1301	0/1:14,7:21:99:217,0,406	0/0:33,0:33:99:0,99,1866	0/0:27,0:27:81.28:0,81,1524	0/0:21,0:21:54.18:0,54,1019	0/0:11,0:11:33.10:0,33,586	0/0:17,0:17:51.17:0,51,946	0/0:17,0:17:51.17:0,51,953	0/0:23,0:23:69.24:0,69,1280	0/0:18,0:18:54.19:0,54,1016	0/0:15,0:15:45.11:0,45,764	0/0:29,0:29:84.22:0,84,1584	0/0:21,0:21:63.22:0,63,1184	0/0:30,0:30:90.29:0,90,1633	0/0:28,0:28:84.27:0,84,1538	0/0:19,0:19:54.17:0,54,974	0/0:16,0:16:48.16:0,48,892	0/0:23,0:23:66.21:0,66,1202	0/0:21,0:21:54.18:0,54,993	0/0:24,0:24:72.25:0,72,1359	0/0:31,0:30:90.24:0,90,1579	0/0:14,0:14:42.14:0,42,797
chr10	43543393	.	GCCTGTGTGGCCCACACTGGGCTCTAA	G	5332.76	PASS	AC=20;AF=0.370;AN=54;BaseQRankSum=8.648;DP=576;FS=0.000;HRun=0;HaplotypeScore=364.8124;InbreedingCoeff=0.8388;MQ=74.48;MQ0=0;MQRankSum=-3.935;QD=31.93;ReadPosRankSum=0.409;VQSLOD=2.1770;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:75.24:0,75,6925	0/0:10,0:10:21.07:0,21,2359	./.	0/0:14,0:16:3.01:0,3,43	0/0:17,0:17:30.10:0,30,3152	0/0:14,0:14:27.08:0,27,1836	0/0:37,0:37:78.25:0,78,7756	0/0:27,0:27:42.14:0,42,2074	0/0:27,0:27:54.19:0,54,5393	1/1:11,7:18:17.99:571,18,0	1/1:15,3:18:3.01:202,3,0	0/0:26,0:26:57.18:0,57,5029	0/0:32,0:32:78.25:0,78,7703	0/0:11,0:11:24.08:0,24,2549	0/0:24,0:24:51.16:0,51,4479	0/0:22,0:22:48.16:0,48,5011	0/0:36,0:36:75.26:0,75,7985	1/1:10,3:13:3.01:202,3,0	1/1:23,4:27:12:451,12,0	1/1:6,3:9:3.01:202,3,0	1/1:28,0:28:14.94:189,15,0	0/0:8,0:8:18.06:0,18,1519	0/0:11,0:11:15.05:0,15,731	0/0:42,0:42:75.26:0,75,7664	1/1:6,3:9:3.01:202,3,0	1/1:9,5:14:15.05:893,15,0	1/1:12,10:22:27.09:1816,27,0	1/1:4,5:9:9.03:605,9,0
chr10	43543948	.	AGAACC	A	2656.25	PASS	AB=0.937;AC=32;AF=0.571;AN=56;BaseQRankSum=3.339;DP=414;FS=65.366;HRun=0;HaplotypeScore=41.7966;InbreedingCoeff=-0.3765;MQ=30.48;MQ0=122;MQRankSum=2.389;QD=6.56;ReadPosRankSum=-1.329;VQSLOD=-0.6301;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:24,14:24:99:251,0,138	1/1:4,2:3:9.03:161,9,0	0/0:2,0:1:2.80:0,3,13	0/0:2,0:1:2.04:0,2,6	0/1:12,0:7:40.43:249,0,40	1/1:9,3:6:5.53:70,6,0	1/1:5,4:4:9.03:171,9,0	0/0:5,0:3:4.27:0,4,32	1/1:5,6:7:9.03:127,9,0	0/1:13,1:10:99:158,0,115	0/1:13,1:10:31.50:168,0,31	0/1:9,0:4:27.26:43,0,27	0/1:10,0:7:4.58:5,0,203	0/1:6,0:3:9.29:9,0,20	0/1:13,1:8:8.31:301,0,8	1/1:8,3:4:6.02:91,6,0	0/1:51,0:36:99:105,0,354	0/1:26,15:27:70.82:71,0,164	0/1:8,0:5:49.52:50,0,86	0/1:5,2:5:27.90:51,0,28	0/1:11,2:7:18.17:18,0,24	0/1:8,0:3:8.64:25,0,9	0/1:5,0:5:1.11:9,0,1	0/1:26,0:12:51.62:52,0,153	1/1:6,6:8:8.82:67,9,0	1/1:15,2:11:11.47:417,11,0	0/1:19,1:11:84.79:85,0,208	0/1:31,0:11:58.46:58,0,100
chr10	43544458	.	ACCCTCTCTTAC	A	1907.28	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.165;DP=638;FS=1.858;HRun=0;HaplotypeScore=198.4194;InbreedingCoeff=0.9798;MQ=85.77;MQ0=0;MQRankSum=-4.750;QD=90.82;ReadPosRankSum=-2.003;VQSLOD=3.4530;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,132,7479	0/0:8,0:8:24.08:0,24,1423	0/0:30,0:30:86.95:0,87,4615	0/0:24,0:24:69.24:0,69,3370	0/0:17,0:17:48.16:0,48,2758	0/0:25,0:25:75.26:0,75,4308	0/0:33,0:33:99:0,99,5713	1/1:0,21:21:60.20:2002,60,0	0/0:33,0:33:99:0,99,5498	0/0:27,0:27:81.27:0,81,4467	0/0:16,0:16:48.16:0,48,2792	0/0:17,0:17:51.18:0,51,3022	0/0:11,0:11:33.11:0,33,1833	0/0:24,0:24:72.25:0,72,4170	0/0:22,0:22:66.23:0,66,3884	0/0:15,0:15:45.15:0,45,2647	0/0:26,0:26:78.27:0,78,4588	0/0:26,0:26:78.27:0,78,4592	0/0:33,0:33:96.32:0,96,5099	0/0:10,0:10:30.10:0,30,1778	0/0:51,0:51:99:0,151,8375	0/0:23,0:23:69.24:0,69,4089	0/0:15,0:15:45.15:0,45,2599	0/0:28,0:28:84.29:0,84,4579	0/0:5,0:5:15.05:0,15,823	0/0:15,0:15:45.15:0,45,2630	0/0:31,0:31:93.30:0,93,4969	0/0:8,0:8:24.08:0,24,1094
chr10	43544783	.	A	AT	877.02	PASS	AB=1.000;AC=3;AF=0.056;AN=54;BaseQRankSum=-8.548;DP=504;FS=7.285;HRun=7;HaplotypeScore=46.3420;InbreedingCoeff=0.7631;MQ=65.21;MQ0=0;MQRankSum=0.633;QD=19.93;ReadPosRankSum=-3.666;VQSLOD=1.9008;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,120,1132	0/0:5,0:5:12.01:0,12,116	./.	0/1:8,0:7:0.86:1,0,13	0/0:12,0:12:36.05:0,36,343	0/0:14,0:14:36.04:0,36,341	0/0:17,0:17:44.98:0,45,405	1/1:7,29:36:87.19:971,87,0	0/0:17,0:17:41.94:0,42,386	0/0:18,0:18:50.94:0,51,472	0/0:18,0:18:42.04:0,42,398	0/0:10,0:10:26.99:0,27,247	0/0:16,0:16:45.03:0,45,421	0/0:21,0:21:57.08:0,57,545	0/0:12,0:12:33.02:0,33,308	0/0:12,0:12:33.03:0,33,312	0/0:28,0:28:78.02:0,78,727	0/0:24,0:24:69.07:0,69,653	0/0:22,0:22:63.03:0,63,579	0/0:22,0:22:63.03:0,63,592	0/0:19,0:19:48.05:0,48,454	0/0:17,0:17:45.05:0,45,427	0/0:17,0:17:45.07:0,45,434	0/0:23,0:23:69.07:0,69,652	0/0:15,0:15:45.04:0,45,422	0/0:19,0:19:54.07:0,54,513	0/0:21,0:21:63.06:0,63,589	0/0:13,0:13:39.06:0,39,376
chr10	43545694	.	TA	T	7089.10	PASS	AB=0.792;AC=32;AF=0.571;AN=56;BaseQRankSum=6.261;DP=542;FS=6.288;HRun=10;HaplotypeScore=66.1463;InbreedingCoeff=0.8623;MQ=60.74;MQ0=18;MQRankSum=-4.378;QD=21.10;ReadPosRankSum=1.506;VQSLOD=5.9260;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,51:55:99:1102,132,0	1/1:0,10:10:26.99:234,27,0	0/0:19,0:13:35.93:0,36,354	0/0:18,0:10:20.98:0,21,198	0/0:20,0:20:20.71:0,21,438	1/1:2,19:21:47.92:408,48,0	1/1:4,13:17:38.99:339,39,0	1/1:3,16:19:17.83:378,18,0	1/1:1,10:10:29.94:252,30,0	1/1:3,20:23:59.96:516,60,0	1/1:1,13:14:35.99:313,36,0	0/0:15,0:15:39.11:0,39,431	0/0:15,1:17:18.88:0,19,409	0/0:21,0:21:54.10:0,54,583	0/0:15,0:15:45.08:0,45,484	0/0:19,0:19:48.59:0,49,522	0/0:40,1:39:76.24:0,76,1060	1/1:1,23:23:62.99:547,63,0	1/1:1,18:19:47.95:408,48,0	1/1:2,16:18:44.91:381,45,0	0/1:4,10:12:16.80:224,0,17	0/1:6,0:6:7.39:7,0,118	0/0:8,0:8:18.05:0,18,199	0/0:13,0:11:33.09:0,33,365	1/1:1,14:15:41.99:365,42,0	1/1:2,27:29:80.98:703,81,0	1/1:0,22:22:62.99:547,63,0	1/1:2,15:16:41.99:365,42,0
chr10	43545838	.	G	GGTTTTCATCGTATGGGGTA	54088.94	PASS	AB=0.667;AC=31;AF=0.554;AN=56;BaseQRankSum=1.702;DP=550;FS=0.322;HRun=0;HaplotypeScore=252.8776;InbreedingCoeff=0.9159;MQ=87.16;MQ0=0;MQRankSum=-18.351;QD=173.36;ReadPosRankSum=-3.151;VQSLOD=4.0393;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:27,9:39:96.28:5964,96,0	1/1:5,1:6:12.04:653,12,0	0/0:25,0:25:65.79:0,66,2860	0/0:28,0:28:80.60:0,81,3198	0/0:18,0:18:48.15:0,48,2435	1/1:12,6:18:48.16:3364,48,0	1/1:12,7:21:57.20:4165,57,0	1/1:41,0:41:99:7337,114,0	0/1:7,6:14:99:2775,0,129	1/1:10,2:14:42.13:2708,42,0	1/1:7,2:9:21.07:1326,21,0	0/0:19,0:19:57.20:0,57,2781	0/0:14,0:14:39.13:0,39,1982	0/0:21,0:21:63.20:0,63,2941	0/0:14,0:14:42.14:0,42,2294	0/0:15,0:15:45.15:0,45,2357	0/0:40,0:40:99:0,114,5577	1/1:9,6:17:45.07:2863,45,0	1/1:13,3:19:51.16:2889,51,0	1/1:11,1:13:33.11:2285,33,0	1/1:17,1:21:39.60:2415,40,0	0/0:6,0:6:15.05:0,15,824	0/0:4,0:4:12.04:0,12,659	0/0:34,0:34:99:0,102,5071	1/1:6,9:16:45.15:3304,45,0	1/1:18,5:26:75.26:5030,75,0	1/1:17,7:26:69.24:5292,69,0	1/1:2,5:12:21.07:1719,21,0
chr10	43546153	.	G	GCA	4098.19	PASS	AB=0.577;AC=9;AF=0.161;AN=56;BaseQRankSum=0.654;DP=649;FS=8.009;HRun=0;HaplotypeScore=138.7003;InbreedingCoeff=0.8219;MQ=73.07;MQ0=1;MQRankSum=-3.079;QD=30.58;ReadPosRankSum=1.659;VQSLOD=5.3645;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,39:50:99:1673,102,0	1/1:1,9:10:24.04:364,24,0	0/0:27,0:22:29.67:0,30,290	0/0:28,0:25:56.94:0,57,651	0/0:17,0:17:45.13:0,45,545	0/1:4,11:15:1.97:459,0,2	1/1:12,16:28:1.83:510,2,0	0/0:35,0:35:54.16:0,54,659	1/1:6,25:31:3.86:1092,4,0	0/0:20,0:20:51.16:0,51,630	0/0:19,0:19:42.13:0,42,521	0/0:28,0:28:72.21:0,72,880	0/0:14,0:14:36.10:0,36,433	0/0:22,0:22:63.17:0,63,756	0/0:32,0:32:87.27:0,87,1078	0/0:15,0:15:30.09:0,30,372	0/0:22,0:23:54:0,54,646	0/0:19,0:20:50.86:0,51,586	0/0:27,0:27:66.20:0,66,805	0/0:25,0:25:63.20:0,63,780	0/0:45,0:45:99:0,111,1349	0/0:11,0:11:27.08:0,27,335	0/0:10,0:10:27.08:0,27,334	0/0:23,0:23:60.16:0,60,717	0/0:18,0:19:36.09:0,36,431	0/0:26,0:26:66.21:0,66,817	0/0:13,0:14:41.96:0,42,498	0/0:12,0:12:36.07:0,36,429
chr10	43546811	.	C	CT	3721.63	PASS	AB=0.926;AC=21;AF=0.375;AN=56;BaseQRankSum=3.662;DP=598;FS=1.693;HRun=10;HaplotypeScore=90.1360;InbreedingCoeff=0.6929;MQ=72.71;MQ0=9;MQRankSum=-5.941;QD=15.77;ReadPosRankSum=-2.744;VQSLOD=3.3687;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:95.85:0,96,785	0/1:5,0:5:8.67:9,0,62	0/0:53,0:22:3.07:0,3,127	0/1:53,0:25:53.64:54,0,59	0/0:16,0:17:37.97:0,38,301	0/0:12,0:12:32.96:0,33,271	0/0:28,0:28:77.82:0,78,629	0/0:36,0:36:70.87:0,71,572	0/0:14,0:14:35.95:0,36,294	1/1:6,17:23:35.50:580,36,0	1/1:10,5:15:2.38:213,2,0	0/0:22,0:22:26.99:0,27,327	0/0:16,0:16:47.95:0,48,394	0/0:12,0:12:7.81:0,8,229	0/0:17,0:17:47.92:0,48,391	0/0:14,0:14:41.92:0,42,339	0/0:37,0:39:99:0,109,865	1/1:13,9:22:2.60:401,3,0	1/1:11,9:21:15.86:345,16,0	1/1:10,11:22:14.52:380,15,0	0/1:5,2:7:6.60:142,0,7	0/0:15,0:15:41.95:0,42,344	0/0:13,0:13:17.93:0,18,145	0/0:17,0:17:44.94:0,45,369	1/1:6,9:16:35.93:356,36,0	1/1:5,18:23:32.59:551,33,0	1/1:5,9:14:14.46:359,14,0	1/1:6,9:15:33.05:334,33,0
chr10	43546836	.	TC	T	6268.08	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=5.998;DP=594;FS=7.788;HRun=4;HaplotypeScore=74.9679;InbreedingCoeff=0.9802;MQ=59.54;MQ0=15;MQRankSum=-4.456;QD=25.07;ReadPosRankSum=-0.301;VQSLOD=3.2310;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,117,1412	0/0:8,0:8:23.79:0,24,262	0/0:49,0:10:16.90:0,17,137	0/0:47,0:15:15.93:0,16,146	1/1:2,15:17:38.95:414,39,0	0/0:14,0:14:42.10:0,42,512	0/0:32,0:32:91.56:0,92,1105	1/1:3,16:17:38.81:408,39,0	0/0:17,0:17:43.64:0,44,546	1/1:9,12:21:51.08:555,51,0	1/1:6,2:8:17.96:173,18,0	0/0:16,0:16:39.08:0,39,470	0/0:14,0:14:33.07:0,33,396	0/0:11,0:11:30.05:0,30,340	1/1:3,19:22:57.14:655,57,0	1/1:0,15:15:36.11:429,36,0	0/0:45,0:45:99:0,121,1524	1/1:11,10:21:51.05:544,51,0	1/1:9,6:15:33.04:359,33,0	1/1:14,15:29:72.13:767,72,0	1/1:3,7:10:6.02:70,6,0	0/0:18,0:18:48.12:0,48,595	0/0:12,0:12:36.08:0,36,433	0/0:18,0:18:51.11:0,51,642	1/1:5,15:20:57.13:637,57,0	1/1:5,19:24:60.09:655,60,0	1/1:3,16:19:30.09:355,30,0	1/1:1,8:9:21.06:248,21,0
chr10	43547541	.	G	GA	572.15	PASS	AB=0.965;AC=19;AF=0.352;AN=54;BaseQRankSum=3.292;DP=403;FS=7.020;HRun=11;HaplotypeScore=100.5442;InbreedingCoeff=0.2965;MQ=47.90;MQ0=17;MQRankSum=-5.363;QD=2.82;ReadPosRankSum=-1.710;VQSLOD=-0.0609;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:17,15:31:29.62:235,30,0	1/1:6,2:9:2.17:55,2,0	1/1:4,0:2:0.47:1,0,0	./.	0/0:17,0:17:2.50:0,3,78	1/1:12,8:21:22.01:169,22,0	1/1:8,7:13:9.02:91,9,0	0/0:13,0:22:21.93:0,22,63	1/1:7,6:14:6.41:88,6,0	0/0:15,0:14:23.90:0,24,185	0/1:7,2:9:21.75:22,0,37	0/0:8,0:9:10.97:0,11,74	0/1:12,0:14:1.22:1,0,65	0/0:5,0:5:5.91:0,6,46	0/1:15,0:16:12.51:13,0,78	0/0:6,0:7:13.97:0,14,96	0/0:24,0:24:25.56:0,26,191	0/1:23,0:23:11.93:12,0,98	0/0:10,0:11:19.79:0,20,139	0/1:13,1:13:33.03:33,0,115	0/0:8,0:8:4.90:0,5,45	0/1:13,0:11:6.51:7,0,78	0/0:8,0:7:5.96:0,6,46	0/0:17,0:18:15.85:0,16,119	0/0:10,0:10:14.83:0,15,111	0/1:17,0:16:8.93:9,0,118	0/0:14,0:14:20.87:0,21,160	0/0:15,0:13:26.86:0,27,208
chr10	43548071	.	C	CA	1152.53	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-8.244;DP=611;FS=4.886;HRun=1;HaplotypeScore=63.2868;InbreedingCoeff=0.9954;MQ=81.54;MQ0=0;MQRankSum=-2.119;QD=41.16;ReadPosRankSum=-4.205;VQSLOD=2.3985;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,108,1506	0/0:8,0:8:21.07:0,21,286	0/0:21,0:21:57.18:0,57,769	0/0:23,0:23:62.80:0,63,791	0/0:21,0:21:60.19:0,60,819	0/0:16,0:16:48.16:0,48,671	0/0:29,0:29:87.26:0,87,1195	1/1:1,27:28:81.25:1247,81,0	0/0:18,0:18:45.11:0,45,607	0/0:15,0:15:39.13:0,39,543	0/0:17,0:17:51.16:0,51,693	0/0:22,0:22:66.22:0,66,922	0/0:28,0:28:84.07:0,84,1144	0/0:25,0:25:72.24:0,72,1005	0/0:23,0:23:63.21:0,63,881	0/0:23,0:23:69.22:0,69,947	0/0:29,0:29:87.29:0,87,1216	0/0:17,0:17:48.16:0,48,671	0/0:26,0:26:72.19:0,72,967	0/0:19,0:19:48.15:0,48,652	0/0:42,0:42:99:0,120,1658	0/0:12,0:12:36.11:0,36,486	0/0:15,0:15:45.14:0,45,612	0/0:26,0:26:75.25:0,75,1045	0/0:15,0:15:39.11:0,39,526	0/0:17,0:17:48.14:0,48,638	0/0:29,0:28:78.25:0,78,1073	0/0:11,0:11:33.11:0,33,460
chr10	43550181	.	CGTGTGTGTGT	C	4425.68	PASS	AB=0.813;AC=19;AF=0.339;AN=56;BaseQRankSum=6.449;DP=582;FS=1.852;HRun=0;HaplotypeScore=169.5333;InbreedingCoeff=0.8469;MQ=56.95;MQ0=11;MQRankSum=-8.189;QD=25.73;ReadPosRankSum=1.333;VQSLOD=4.4431;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:35:53.77:0,54,1282	0/0:8,0:11:12.04:0,12,282	0/0:29,0:12:9.03:0,9,242	0/0:41,0:26:9.03:0,9,194	0/0:16,0:16:24.08:0,24,963	0/0:7,0:18:33.11:0,33,854	0/0:14,0:23:33.11:0,33,847	0/0:34,0:34:57.18:0,57,1471	0/0:13,0:20:6.37:0,6,843	1/1:10,5:15:12.04:356,12,0	1/1:5,8:15:21.54:504,22,0	0/0:20,0:21:39.13:0,39,1566	0/0:13,0:15:24.08:0,24,1011	0/0:15,0:15:18.06:0,18,714	0/0:24,0:23:36.12:0,36,1351	0/0:19,0:19:36.12:0,36,1123	0/0:22,0:25:34.47:0,34,1387	0/1:10,2:13:41.72:296,0,42	1/1:12,4:15:9.85:356,10,0	1/1:6,9:15:15.28:534,15,0	1/1:24,8:30:9.03:255,9,0	0/0:18,0:19:30.09:0,30,1245	0/0:15,0:15:36.12:0,36,1522	0/0:25,0:27:54.19:0,54,2261	1/1:10,6:16:18.06:538,18,0	1/1:14,9:24:29.78:614,30,0	1/1:6,12:19:24.85:726,25,0	1/1:1,4:6:9.03:249,9,0
chr10	43550580	.	G	GT	11631.19	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-5.014;DP=462;FS=3.417;HRun=2;HaplotypeScore=47.1173;InbreedingCoeff=0.9908;MQ=71.33;MQ0=1;MQRankSum=-1.619;QD=35.90;ReadPosRankSum=2.885;VQSLOD=5.2141;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,27:29:66.22:944,66,0	1/1:0,9:9:21.07:302,21,0	0/0:13,0:11:30.06:0,30,342	0/0:13,0:12:27.02:0,27,287	1/1:0,18:19:48.01:618,48,0	1/1:3,13:16:42.14:604,42,0	1/1:1,15:16:42.14:594,42,0	1/1:3,20:23:60.14:806,60,0	1/1:0,12:12:27:357,27,0	1/1:0,20:20:60.19:846,60,0	1/1:3,7:9:27.07:369,27,0	0/0:10,0:10:27.07:0,27,322	0/0:10,0:10:30.09:0,30,371	0/0:10,0:10:27.08:0,27,334	1/1:1,11:12:24.08:345,24,0	1/1:0,6:6:15.05:216,15,0	0/0:26,0:26:75.19:0,75,910	1/1:1,17:18:48.16:691,48,0	1/1:5,19:24:60.11:784,60,0	1/1:1,19:20:51.11:788,51,0	1/1:2,25:26:72.24:1036,72,0	0/0:13,0:13:39.10:0,39,468	0/0:20,0:20:60.15:0,60,713	0/0:23,0:23:69.20:0,69,840	1/1:0,22:22:63.21:906,63,0	1/1:0,13:13:39.13:562,39,0	1/1:0,19:19:47.94:691,48,0	1/1:4,5:9:12.04:172,12,0
chr10	43550670	.	GAA	G	2220.78	PASS	AB=1.000;AC=22;AF=0.393;AN=56;BaseQRankSum=4.279;DP=435;FS=0.954;HRun=14;HaplotypeScore=72.3468;InbreedingCoeff=0.8663;MQ=57.68;MQ0=12;MQRankSum=1.793;QD=13.71;ReadPosRankSum=3.465;VQSLOD=2.7788;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:36:75.50:0,75,727	0/0:3,0:8:18.03:0,18,182	0/1:12,0:7:0.75:1,0,150	0/1:9,0:3:2.60:3,0,33	0/0:13,0:13:27.09:0,27,373	0/0:10,0:16:33.07:0,33,352	0/0:4,0:12:17.77:0,18,155	0/0:19,1:22:22.34:0,22,521	0/0:2,0:12:30.05:0,30,300	1/1:7,11:17:42.02:388,42,0	1/1:6,13:17:29.82:324,30,0	0/0:10,0:10:21.07:0,21,280	0/0:9,0:8:21.07:0,21,289	0/0:12,0:13:14.35:0,14,267	0/0:14,0:14:36.11:0,36,488	0/0:11,0:12:23.57:0,24,303	0/0:42,0:41:92.77:0,93,1114	1/1:3,13:16:41.77:373,42,0	1/1:5,9:14:14.68:233,15,0	1/1:8,6:15:11.82:158,12,0	1/1:4,9:13:23.46:221,23,0	0/0:9,0:10:21.06:0,21,276	0/0:16,0:16:24.44:0,24,282	0/0:22,0:24:53.55:0,54,665	1/1:3,8:12:26.66:234,27,0	1/1:6,11:17:32.08:303,32,0	1/1:4,6:10:17.97:167,18,0	1/1:2,1:3:2.99:28,3,0
chr10	43551478	.	CTTTAT	C	6091.41	PASS	AB=0.904;AC=12;AF=0.214;AN=56;BaseQRankSum=9.219;DP=603;FS=9.300;HRun=0;HaplotypeScore=120.9053;InbreedingCoeff=0.7872;MQ=76.48;MQ0=0;MQRankSum=-10.848;QD=37.60;ReadPosRankSum=2.137;VQSLOD=4.4501;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,59:69:99:2954,141,0	1/1:1,8:9:24.08:504,24,0	0/0:19,0:19:48.16:0,48,1285	0/0:11,0:10:30.10:0,30,783	0/0:19,0:19:54.17:0,54,1542	1/1:1,18:19:48.16:1007,48,0	1/1:4,15:19:39.13:818,39,0	0/0:26,0:26:69.23:0,69,1966	1/1:4,14:18:33.11:693,33,0	0/0:26,0:26:78.27:0,78,2412	0/0:15,0:15:45.15:0,45,1388	0/0:23,0:23:66.23:0,66,2046	0/0:19,0:19:54.19:0,54,1625	0/0:12,0:12:33.11:0,33,1019	0/0:25,0:25:69.24:0,69,2111	0/1:12,2:14:83.35:83,0,894	0/0:27,0:27:78.27:0,78,2372	0/0:26,0:26:78.27:0,78,2401	0/0:16,0:16:48.16:0,48,1419	0/0:20,0:20:57.20:0,57,1764	0/0:18,0:18:51.18:0,51,1560	0/0:20,0:20:57.20:0,57,1749	0/0:20,0:20:54.19:0,54,1667	0/1:13,1:14:32.84:33,0,807	0/0:24,0:24:72.20:0,72,2090	0/0:31,0:31:78.27:0,78,2381	0/0:31,0:30:87.30:0,87,2683	0/0:13,0:13:39.13:0,39,1182
chr10	43551716	.	CA	C	2026.88	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=4.150;DP=584;FS=2.480;HRun=2;HaplotypeScore=71.2252;InbreedingCoeff=0.9941;MQ=75.81;MQ0=0;MQRankSum=-1.004;QD=35.56;ReadPosRankSum=4.265;VQSLOD=4.1997;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,102,1587	0/0:5,0:5:15.05:0,15,239	0/0:16,0:16:44.93:0,45,568	0/0:24,0:25:60.74:0,61,951	1/1:0,21:21:57.19:792,57,0	0/0:22,0:22:63.19:0,63,976	0/0:26,0:26:78.25:0,78,1218	0/0:25,0:25:75.22:0,75,1090	0/0:25,0:25:72.21:0,72,1097	0/0:19,0:19:57.19:0,57,909	0/0:11,0:11:33.10:0,33,504	0/0:27,0:27:81.25:0,81,1247	0/0:11,0:11:33.08:0,33,477	0/0:15,0:15:45.14:0,45,686	1/1:0,19:19:51.17:709,51,0	1/1:0,17:17:48.16:668,48,0	0/0:27,0:27:81.20:0,81,1189	0/0:28,0:28:84.14:0,84,1251	0/0:16,0:16:48.14:0,48,719	0/0:20,0:20:60.18:0,60,910	0/0:25,0:25:75.22:0,75,1146	0/0:16,0:16:37.48:0,37,701	0/0:13,0:13:39.13:0,39,621	0/0:24,0:24:72.17:0,72,1073	0/0:21,0:21:63.21:0,63,1005	0/0:27,0:27:81.27:0,81,1270	0/0:33,0:32:99:0,99,1510	0/0:16,0:16:48.16:0,48,759
chr10	43552171	.	TA	T	11577.47	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=12.407;DP=680;FS=1.259;HRun=3;HaplotypeScore=65.0883;InbreedingCoeff=0.9989;MQ=84.89;MQ0=0;MQRankSum=-4.899;QD=32.70;ReadPosRankSum=2.683;VQSLOD=5.2992;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,41:42:99:1301,105,0	1/1:0,7:7:21.07:260,21,0	0/0:29,0:29:84.26:0,84,1162	0/0:30,0:30:84.19:0,84,1106	0/0:16,0:16:48.16:0,48,689	1/1:1,20:21:57.18:706,57,0	1/1:0,19:19:45.14:558,45,0	0/0:21,0:21:54.16:0,54,743	1/1:0,25:25:69.22:855,69,0	1/1:1,21:22:63.20:781,63,0	1/1:1,10:11:21.07:260,21,0	0/0:25,0:25:72.24:0,72,1036	0/0:21,0:21:57.18:0,57,803	0/0:24,0:24:69.23:0,69,993	0/0:27,0:27:78.26:0,78,1123	0/0:29,0:29:84.26:0,84,1189	0/0:40,0:40:99:0,120,1721	1/1:2,36:38:90.28:1116,90,0	1/1:0,23:23:69.22:854,69,0	1/1:0,28:28:78.24:966,78,0	1/1:1,39:40:99:1260,102,0	0/0:12,0:12:36.12:0,36,518	0/0:24,0:24:66.19:0,66,898	0/0:28,0:28:84.22:0,84,1166	1/1:0,22:22:66.21:818,66,0	1/1:1,20:21:60.16:726,60,0	1/1:0,20:20:51.16:632,51,0	1/1:0,15:15:39.12:483,39,0
chr10	43553045	.	A	AACACACAC	7393.48	PASS	AB=0.795;AC=34;AF=0.630;AN=54;BaseQRankSum=1.466;DP=416;FS=1.724;HRun=0;HaplotypeScore=120.4653;InbreedingCoeff=0.7754;MQ=62.17;MQ0=0;MQRankSum=-7.689;QD=27.90;ReadPosRankSum=-4.255;VQSLOD=3.2109;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:25:24.52:572,25,0	1/1:1,0:3:3.01:104,3,0	0/1:18,0:13:1.58:2,0,102	./.	0/1:4,0:13:5.74:6,0,35	1/1:13,0:18:3.01:104,3,0	1/1:11,0:15:6.02:215,6,0	1/1:34,0:32:29.86:445,30,0	1/1:12,0:15:14.39:446,14,0	1/1:13,1:14:16.30:441,16,0	1/1:8,0:7:15.04:387,15,0	0/0:12,0:12:30.01:0,30,561	0/0:7,0:8:24.08:0,24,536	0/0:10,0:10:18.03:0,18,349	0/0:3,0:12:14.48:0,14,78	0/0:10,0:14:11.72:0,12,123	0/0:22,0:22:27.96:0,28,578	1/1:10,2:12:12.04:389,12,0	1/1:13,2:17:30.08:845,30,0	1/1:9,0:13:5.85:181,6,0	1/1:12,0:12:9:128,9,0	0/0:13,0:13:27.09:0,27,680	0/0:11,0:11:24.04:0,24,561	0/0:32,0:32:48.07:0,48,1081	1/1:5,4:10:12.04:464,12,0	1/1:11,0:16:42.11:1307,42,0	1/1:12,1:14:21.54:715,22,0	1/1:1,5:7:18.04:642,18,0
chr10	43553677	.	G	GC	10671.76	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=16.709;DP=656;FS=25.323;HRun=0;HaplotypeScore=143.3939;InbreedingCoeff=0.9986;MQ=73.19;MQ0=0;MQRankSum=-7.470;QD=24.88;ReadPosRankSum=1.122;VQSLOD=3.3589;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,36:46:99:1129,119,0	1/1:2,7:9:19.48:202,19,0	0/0:26,0:25:66:0,66,876	0/0:17,0:18:48.07:0,48,600	1/1:4,14:18:36.22:295,36,0	1/1:1,19:21:59.09:588,59,0	1/1:5,18:23:62.60:611,63,0	1/1:6,10:16:35:321,35,0	1/1:5,22:27:76.89:758,77,0	1/1:3,12:18:35.80:452,36,0	1/1:2,13:15:32.52:283,33,0	0/0:25,0:25:75.24:0,75,1030	0/0:22,0:22:66.22:0,66,919	0/0:22,0:22:66.18:0,66,870	1/1:6,19:25:66.37:655,66,0	1/1:5,17:22:56.04:573,56,0	0/0:35,0:35:99:0,104,1426	1/1:4,15:19:42.26:446,42,0	1/1:7,12:19:49.85:438,50,0	1/1:1,10:12:33.05:329,33,0	1/1:5,42:48:99:1161,120,0	0/0:25,0:25:75.17:0,75,963	0/0:20,0:20:54.18:0,54,744	0/0:34,0:34:99:0,99,1312	1/1:5,19:24:51.96:576,52,0	1/1:3,22:26:70.88:763,71,0	1/1:6,27:33:58.48:836,58,0	1/1:0,8:8:24.06:256,24,0
chr10	43553679	.	A	AGG	15782.23	PASS	AB=0.553;AC=37;AF=0.661;AN=56;BaseQRankSum=17.160;DP=699;FS=33.377;HRun=0;HaplotypeScore=156.1554;InbreedingCoeff=0.9140;MQ=73.66;MQ0=0;MQRankSum=-7.376;QD=33.58;ReadPosRankSum=2.616;VQSLOD=3.4905;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,40:48:99:1643,99,0	1/1:3,7:10:29.69:414,30,0	0/0:27,0:26:69.22:0,69,1063	0/0:19,0:19:51.14:0,51,746	0/1:4,15:21:10.64:315,0,11	1/1:3,19:22:39.36:821,39,0	1/1:5,21:27:58.54:944,59,0	1/1:12,10:22:31.10:670,31,0	1/1:10,22:32:10.45:1059,10,0	1/1:7,12:19:31.50:697,31,0	1/1:0,14:17:26.79:371,27,0	0/0:25,0:25:72.25:0,72,1175	0/0:22,0:22:66.23:0,66,1077	0/0:21,0:21:63.20:0,63,1002	1/1:3,22:25:32.78:807,33,0	1/1:6,17:23:26.35:847,26,0	0/0:37,0:37:99:0,108,1685	1/1:2,18:22:26.30:666,26,0	1/1:7,13:20:11.62:649,12,0	1/1:5,10:15:36.12:531,36,0	1/1:7,46:53:56.88:1669,57,0	0/0:23,0:23:66.21:0,66,1052	0/0:20,0:20:57.19:0,57,928	0/0:35,0:35:99:0,102,1584	1/1:6,19:25:45.35:946,45,0	1/1:5,22:27:42.34:1081,42,0	1/1:3,29:34:75.07:1290,75,0	1/1:0,8:8:24.08:360,24,0
chr10	43554392	.	CAATAAT	C	492.22	PASS	AB=0.800;AC=9;AF=0.225;AN=40;BaseQRankSum=0.785;DP=216;FS=9.437;HRun=0;HaplotypeScore=50.0389;InbreedingCoeff=0.5213;MQ=64.73;MQ0=0;MQRankSum=-3.519;QD=11.19;ReadPosRankSum=-0.734;VQSLOD=0.0610;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,7:18:9.03:165,9,0	./.	./.	./.	./.	1/1:2,5:7:12.04:221,12,0	1/1:3,3:6:6.02:118,6,0	0/0:22,0:20:21.07:0,21,465	1/1:6,3:9:3.01:61,3,0	./.	0/0:3,0:4:3.01:0,3,79	0/0:5,0:5:6.02:0,6,169	0/0:3,0:3:3.01:0,3,69	0/1:3,1:4:55.43:55,0,80	./.	0/0:8,0:8:15.05:0,15,485	0/0:18,0:22:47.96:0,48,1290	0/0:9,0:18:33.09:0,33,662	0/0:2,0:6:12.04:0,12,327	./.	0/0:2,0:4:6.02:0,6,157	./.	0/0:4,0:4:6.02:0,6,195	0/0:6,0:6:15.05:0,15,462	0/0:3,0:6:6.02:0,6,157	0/0:6,0:9:18:0,18,373	0/0:2,0:3:3.01:0,3,79	0/0:4,0:15:30.10:0,30,751
chr10	43554655	.	CA	C	1790.20	PASS	AB=0.556;AC=21;AF=0.375;AN=56;BaseQRankSum=4.423;DP=396;FS=2.676;HRun=13;HaplotypeScore=50.4902;InbreedingCoeff=0.8126;MQ=68.79;MQ0=1;MQRankSum=0.716;QD=11.55;ReadPosRankSum=1.708;VQSLOD=3.4166;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:28:69.53:0,70,419	0/0:7,0:7:12.02:0,12,117	0/0:9,0:8:5.98:0,6,48	0/0:9,0:8:12.86:0,13,113	1/1:4,0:5:6.09:18,6,0	0/0:10,1:11:5.10:0,5,203	0/0:17,1:20:25.66:0,26,365	0/0:21,0:22:50.87:0,51,468	0/0:10,1:11:20.97:0,21,188	1/1:2,10:13:5.65:195,6,0	1/1:6,3:9:8.80:52,9,0	0/0:13,0:13:21.02:0,21,199	0/0:8,0:8:21:0,21,192	0/0:8,0:8:21.03:0,21,200	0/0:15,1:16:8.18:0,8,241	0/0:15,0:15:29.98:0,30,273	0/0:28,3:31:9.38:0,9,566	1/1:5,13:20:10.69:223,11,0	1/1:4,6:9:20.86:152,21,0	1/1:2,5:7:14.91:109,15,0	1/1:4,13:17:38.77:285,39,0	0/0:4,0:4:11.93:0,12,100	0/0:10,0:10:18:0,18,161	0/0:19,0:19:48.07:0,48,462	0/1:2,8:10:8.30:110,0,8	1/1:6,10:15:29.73:219,30,0	1/1:2,13:16:11.64:239,12,0	1/1:12,19:31:53.63:394,54,0
chr10	43554728	.	AT	A	2790.28	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=4.699;DP=457;FS=5.194;HRun=9;HaplotypeScore=64.7709;InbreedingCoeff=0.9654;MQ=74.30;MQ0=0;MQRankSum=-0.269;QD=21.80;ReadPosRankSum=4.880;VQSLOD=4.4087;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,33:37:76.08:856,76,0	1/1:0,6:6:15.01:137,15,0	0/0:14,0:14:39.21:0,39,419	0/0:12,0:11:17.55:0,18,180	1/1:0,9:9:27.01:247,27,0	1/1:0,13:13:36.02:329,36,0	1/1:2,15:17:39.02:357,39,0	0/0:36,0:36:93.24:0,93,1052	1/1:0,15:15:39.02:357,39,0	0/0:19,0:19:51.15:0,51,582	0/0:10,0:10:30.02:0,30,329	0/0:14,0:14:39.12:0,39,450	0/0:8,0:8:24.06:0,24,269	0/0:9,0:11:29.89:0,30,298	1/1:0,12:12:26.91:247,27,0	1/1:1,18:19:51.03:467,51,0	0/0:24,0:24:42.35:0,42,653	0/0:28,0:28:81.19:0,81,909	0/0:19,0:18:48.14:0,48,554	0/0:3,0:3:6.02:0,6,69	0/0:19,0:19:54.08:0,54,586	0/0:3,0:3:9.02:0,9,95	0/0:6,0:6:15.04:0,15,173	0/0:16,0:16:47.16:0,47,517	0/0:17,0:16:42.09:0,42,459	0/0:16,0:16:48.14:0,48,547	0/0:25,0:25:63.18:0,63,718	0/0:29,0:29:78.12:0,78,864
chr10	43554965	.	CAAAAAAAA	C	3910.05	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=4.258;DP=387;FS=0.537;HRun=17;HaplotypeScore=102.7380;InbreedingCoeff=0.8803;MQ=73.85;MQ0=1;MQRankSum=-8.465;QD=41.60;ReadPosRankSum=8.704;VQSLOD=1.8703;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,29:33:56.85:1246,57,0	1/1:1,13:14:36.10:803,36,0	0/0:26,0:18:11.98:0,12,549	0/0:13,0:9:1.04:0,1,122	0/0:16,0:16:33.06:0,33,899	1/1:5,13:18:35.94:803,36,0	1/1:6,11:17:23.88:505,24,0	0/0:16,0:22:51.16:0,51,1394	1/1:2,10:12:26.96:552,27,0	0/0:11,0:11:20.81:0,21,811	0/0:17,0:17:51.17:0,51,1693	0/0:3,0:3:9.03:0,9,311	0/0:10,0:10:24.08:0,24,815	0/0:7,0:7:15.05:0,15,480	0/0:1,0:8:15.05:0,15,240	0/0:4,0:11:24.08:0,24,406	0/0:9,0:21:48.16:0,48,1495	0/0:7,0:16:12.04:0,12,392	0/0:7,0:13:30.10:0,30,1008	0/0:8,0:13:30.10:0,30,916	0/0:5,0:4:9.03:0,9,323	0/0:6,0:6:12.04:0,12,427	0/0:9,0:9:18.06:0,18,700	0/0:11,0:12:30.99:0,31,1187	0/0:7,0:12:9.03:0,9,317	0/0:4,0:10:21.07:0,21,797	0/0:12,0:11:33.11:0,33,1156	0/0:12,0:15:33.11:0,33,1076
chr10	43555448	.	TC	T	6200.79	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=5.277;DP=277;FS=1.908;HRun=4;HaplotypeScore=28.5543;InbreedingCoeff=0.9263;MQ=75.64;MQ0=0;MQRankSum=-1.099;QD=31.64;ReadPosRankSum=2.841;VQSLOD=4.3308;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,21:23:60.18:718,60,0	1/1:0,4:4:9.03:107,9,0	0/0:6,0:6:15.05:0,15,215	0/0:5,0:5:12.01:0,12,147	1/1:0,7:7:21.06:252,21,0	1/1:0,11:11:30.09:360,30,0	1/1:1,30:31:87.26:1040,87,0	1/1:2,3:5:6.02:72,6,0	1/1:0,7:7:21.06:252,21,0	1/1:2,6:8:21.06:248,21,0	1/1:0,7:7:21.06:251,21,0	0/0:14,0:14:39.13:0,39,546	0/0:4,0:4:12.04:0,12,168	0/0:8,0:8:24.08:0,24,336	1/1:0,5:5:15.05:180,15,0	1/1:0,5:5:15.05:179,15,0	0/0:25,0:25:75.19:0,75,1009	1/1:0,10:10:30.09:360,30,0	1/1:1,14:15:39.11:454,39,0	1/1:0,5:5:15.05:180,15,0	1/1:0,21:21:57.17:683,57,0	0/0:8,0:8:21.07:0,21,294	0/0:3,0:3:6.01:0,6,67	0/0:8,0:8:21.06:0,21,278	1/1:1,9:10:21.06:252,21,0	1/1:2,5:7:15.05:180,15,0	1/1:0,11:11:24.07:288,24,0	1/1:0,4:4:12.04:143,12,0
chr10	43556000	.	TGG	T	1162.63	PASS	AB=0.833;AC=14;AF=0.259;AN=54;BaseQRankSum=2.241;DP=370;FS=12.496;HRun=13;HaplotypeScore=55.4338;InbreedingCoeff=0.5560;MQ=69.59;MQ0=1;MQRankSum=1.382;QD=8.13;ReadPosRankSum=7.121;VQSLOD=-0.4847;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:12,14:27:29.28:273,29,0	1/1:4,4:8:14.07:107,14,0	0/0:16,0:14:28.20:0,28,226	0/0:13,0:8:11.58:0,12,90	1/1:14,1:17:11.44:82,11,0	1/1:10,7:17:21.03:203,21,0	1/1:11,14:29:50:425,50,0	0/0:10,0:10:3.01:0,3,41	1/1:5,3:9:14.75:128,15,0	0/0:10,0:10:9:0,9,92	0/0:5,0:5:6:0,6,67	0/0:17,0:17:13.78:0,14,105	0/0:2,0:2:3:0,3,29	0/0:8,0:8:6:0,6,57	0/0:14,0:14:18.49:0,18,205	0/0:7,0:7:6.01:0,6,67	0/0:29,0:29:38.99:0,39,398	0/1:14,5:22:52.05:98,0,52	0/0:9,0:9:5.51:0,6,52	0/0:4,0:4:0:0,0,0	0/0:16,0:16:5.99:0,6,50	./.	0/0:8,0:8:3.01:0,3,39	0/1:13,1:14:20.05:20,0,59	0/0:10,0:10:12.01:0,12,135	0/0:14,0:15:8.52:0,9,95	0/0:20,0:21:14.51:0,15,141	0/0:9,0:9:3.01:0,3,32
chr10	43556542	.	C	CTTATTTTTAATTTTA	12820.51	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-5.102;DP=353;FS=27.991;HRun=0;HaplotypeScore=119.9357;InbreedingCoeff=0.9205;MQ=84.21;MQ0=0;MQRankSum=-7.964;QD=86.04;ReadPosRankSum=-1.725;VQSLOD=2.2392;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:57.13:0,57,2375	0/0:2,0:2:6.02:0,6,263	0/0:18,0:18:32.76:0,33,935	0/0:8,0:8:15.03:0,15,369	1/1:7,4:11:15.05:810,15,0	0/0:16,0:16:41.06:0,41,1823	0/0:23,0:23:51.09:0,51,1811	1/1:20,0:20:48.16:1974,48,0	0/0:9,0:9:24.08:0,24,1015	1/1:3,6:14:36.10:1498,36,0	1/1:2,4:7:9.03:610,9,0	0/0:11,0:11:33.11:0,33,1234	0/0:8,0:8:18.06:0,18,665	0/0:7,0:7:18.04:0,18,647	0/0:12,0:12:33.06:0,33,1221	0/0:11,0:11:27.02:0,27,1034	0/0:29,0:29:81.15:0,81,2961	1/1:5,10:19:24.08:1743,24,0	1/1:4,2:8:21.06:947,21,0	1/1:1,2:7:6.02:261,6,0	1/1:2,2:8:3.01:221,3,0	0/0:6,0:6:18.04:0,18,485	0/0:7,0:7:18.05:0,18,670	0/0:14,0:14:39.13:0,39,1389	1/1:5,8:16:21.07:1391,21,0	1/1:4,7:15:33.10:1398,33,0	1/1:1,8:12:12.04:886,12,0	1/1:4,5:12:15.05:1082,15,0
chr10	43556696	.	A	AT	106.06	PASS	AB=0.818;AC=4;AF=0.071;AN=56;BaseQRankSum=-1.880;DP=308;FS=3.029;HRun=0;HaplotypeScore=84.6106;InbreedingCoeff=0.2083;MQ=45.73;MQ0=19;MQRankSum=0.092;QD=2.36;ReadPosRankSum=1.396;VQSLOD=2.6581;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:42.46:0,42,295	0/0:5,0:5:8.67:0,9,50	0/0:21,0:5:1.83:0,2,44	0/1:34,0:6:7.95:8,0,30	0/0:5,0:5:5.91:0,6,38	0/0:10,0:9:20.26:0,20,123	0/0:15,0:15:31.96:0,32,194	0/0:23,0:22:39.69:0,40,260	0/0:4,0:4:9.09:0,9,52	0/0:15,0:15:35.28:0,35,217	0/0:2,0:1:2.80:0,3,13	0/0:11,0:11:24:0,24,268	0/0:4,0:4:6.02:0,6,84	0/0:4,0:4:8.39:0,8,91	1/1:1,3:4:6.01:84,6,0	0/1:3,4:7:7.39:114,0,7	0/0:29,0:29:66.85:0,67,744	0/0:13,0:13:9.39:0,9,65	0/0:8,0:6:13.19:0,13,78	0/0:4,0:4:8.48:0,8,43	0/0:9,0:9:12.22:0,12,72	0/0:3,0:3:6.01:0,6,68	0/0:6,0:5:8.99:0,9,95	0/0:11,0:11:24.02:0,24,285	0/0:11,0:11:13.77:0,14,85	0/0:14,0:14:27.57:0,28,150	0/0:3,0:3:5.25:0,5,23	0/0:4,0:2:2.88:0,3,15
chr10	43556697	.	ATATAT	A	3636.76	PASS	AB=0.639;AC=34;AF=0.607;AN=56;BaseQRankSum=6.621;DP=254;FS=0.729;HRun=0;HaplotypeScore=52.5555;InbreedingCoeff=0.6446;MQ=48.98;MQ0=19;MQRankSum=-6.880;QD=27.14;ReadPosRankSum=-0.376;VQSLOD=3.1953;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,19:20:31.27:562,31,0	1/1:0,1:3:9.03:155,9,0	0/0:21,0:5:12.04:0,12,243	0/0:34,0:6:8.97:0,9,128	1/1:1,4:5:2.83:65,3,0	1/1:4,5:8:21.07:446,21,0	1/1:0,7:9:15.01:269,15,0	1/1:5,2:17:49.89:481,50,0	0/1:0,1:1:0:0,0,0	1/1:3,2:14:26.99:507,27,0	1/1:1,0:1:0.47:1,0,0	0/0:9,0:9:21.07:0,21,568	0/0:4,0:4:6.02:0,6,186	0/0:3,0:3:6.02:0,6,186	0/0:4,0:4:6.01:0,6,161	0/1:5,2:7:72.08:72,0,227	0/0:26,0:26:54.12:0,54,1513	1/1:1,0:9:2.89:104,3,0	1/1:5,0:6:12.50:152,12,0	1/1:0,0:2:6.02:103,6,0	1/1:3,0:6:6.02:104,6,0	0/0:3,0:3:6.01:0,6,176	0/0:6,0:5:6.01:0,6,156	0/0:10,0:10:30.10:0,30,826	1/1:2,0:6:17.93:206,18,0	1/1:1,0:10:14.14:316,14,0	1/1:1,0:2:3.01:47,3,0	1/1:2,0:1:3.01:46,3,0
chr10	43556699	.	ATATAT	A	2853.23	PASS	AB=0.904;AC=31;AF=0.554;AN=56;BaseQRankSum=4.730;DP=248;FS=5.980;HRun=0;HaplotypeScore=55.0754;InbreedingCoeff=0.5403;MQ=52.26;MQ0=16;MQRankSum=-5.537;QD=21.45;ReadPosRankSum=1.216;VQSLOD=2.4830;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,1:20:27.04:535,27,0	1/1:1,1:3:9.03:153,9,0	0/0:21,0:6:15.05:0,15,343	0/0:34,0:6:12.01:0,12,194	1/1:5,0:5:3.01:67,3,0	1/1:9,0:8:21.07:445,21,0	1/1:7,2:9:12.04:249,12,0	0/1:11,0:18:74.01:74,0,74	0/1:1,0:1:0:0,0,0	1/1:5,9:14:14.04:474,14,0	0/1:2,0:1:0:0,0,0	0/0:9,0:9:21.07:0,21,633	0/0:5,0:5:9.03:0,9,269	0/0:2,0:2:6.02:0,6,200	0/0:5,0:5:6.02:0,6,189	0/1:7,0:7:54.49:54,0,272	0/0:21,0:21:54.18:0,54,1699	0/1:7,2:9:10.96:80,0,11	1/1:3,3:6:9.92:143,10,0	1/1:0,2:2:6.02:105,6,0	1/1:4,2:6:6.01:103,6,0	0/0:3,0:3:9.03:0,9,266	0/0:5,0:4:9.03:0,9,241	0/0:10,0:10:30.10:0,30,941	1/1:3,3:6:9.03:147,9,0	1/1:6,4:10:7.33:317,7,0	1/1:1,1:2:3.01:47,3,0	1/1:2,1:1:3.01:46,3,0
chr10	43556936	.	G	GTGA	1688.84	PASS	AB=1.000;AC=34;AF=0.630;AN=54;BaseQRankSum=2.972;DP=261;FS=5.827;HRun=0;HaplotypeScore=48.0691;InbreedingCoeff=0.5671;MQ=48.46;MQ0=30;MQRankSum=-0.239;QD=9.65;ReadPosRankSum=-0.121;VQSLOD=1.5219;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:19,0:13:11.35:66,0,11	1/1:1,0:1:0.47:1,0,0	0/0:9,0:3:2.18:0,2,51	0/0:9,0:7:8.06:0,8,95	0/0:2,0:2:5.97:0,6,45	1/1:3,5:7:0.89:2,1,0	1/1:20,0:16:17.81:125,18,0	0/0:10,0:4:5.93:0,6,40	1/1:11,0:11:20.76:146,21,0	1/1:5,0:5:8.98:80,9,0	1/1:7,0:7:17.96:150,18,0	0/0:20,0:19:33.09:0,33,430	0/0:7,0:7:18.05:0,18,228	0/0:9,0:8:21.01:0,21,236	1/1:6,0:6:5.93:46,6,0	0/1:7,0:7:58.46:78,0,58	0/0:14,0:14:27.05:0,27,331	1/1:8,0:7:15.01:170,15,0	1/1:7,0:3:6:52,6,0	1/1:3,0:3:5.99:49,6,0	1/1:21,0:17:3.91:232,4,0	0/0:3,0:2:6.02:0,6,81	./.	1/1:12,22:33:18.06:352,18,0	1/1:4,0:2:3.01:51,3,0	1/1:8,0:7:17.97:207,18,0	1/1:3,0:3:2.96:19,3,0	1/1:3,0:3:6.41:42,6,0
chr10	43558538	.	T	TAAAGA	18591.91	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-12.039;DP=632;FS=5.369;HRun=0;HaplotypeScore=112.9002;InbreedingCoeff=0.9993;MQ=68.13;MQ0=0;MQRankSum=-7.486;QD=62.81;ReadPosRankSum=-2.305;VQSLOD=5.1059;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:93.30:0,93,1795	0/0:14,0:14:39.12:0,39,749	0/0:15,0:15:27.09:0,27,514	0/0:14,0:14:33.08:0,33,547	1/1:6,24:31:75.02:1891,75,0	0/0:23,0:23:63.22:0,63,1245	0/0:16,0:16:36.08:0,36,628	1/1:11,18:30:71.99:1618,72,0	0/0:18,0:18:54.19:0,54,1072	1/1:7,19:31:81.21:2112,81,0	1/1:3,11:14:39.13:1104,39,0	0/0:23,0:23:57.18:0,57,1101	0/0:23,0:23:63.20:0,63,1232	0/0:23,0:23:57.17:0,57,1066	0/0:25,0:25:72.22:0,72,1378	0/0:25,0:25:66.20:0,66,1246	0/0:15,0:15:24.91:0,25,730	1/1:4,18:22:45.15:1324,45,0	1/1:5,16:23:63.11:1450,63,0	1/1:8,27:35:78.27:2231,78,0	1/1:3,11:15:24.01:615,24,0	0/0:22,0:22:60.19:0,60,1172	0/0:21,0:21:57.20:0,57,1134	0/0:19,0:19:54.14:0,54,996	1/1:3,18:21:54.19:1564,54,0	1/1:8,17:28:63.19:1686,63,0	1/1:0,20:20:45.15:1355,45,0	1/1:5,17:26:57.19:1642,57,0
chr10	43558679	.	GGTACCACGTGCA	G	5856.53	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=11.698;DP=661;FS=0.000;HRun=0;HaplotypeScore=220.9581;InbreedingCoeff=0.9907;MQ=74.01;MQ0=0;MQRankSum=-12.011;QD=67.32;ReadPosRankSum=2.597;VQSLOD=3.9241;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,20:28:36.12:1261,36,0	1/1:0,4:4:12:353,12,0	0/0:23,0:23:36.12:0,36,1602	0/0:20,0:19:38.94:0,39,1384	0/0:31,0:31:81.28:0,81,4460	1/1:4,14:18:42.14:1555,42,0	1/1:3,15:18:33.07:1021,33,0	0/0:37,0:37:99:0,102,5444	1/1:2,17:19:45.15:1666,45,0	0/0:42,0:42:99:0,114,6465	0/0:19,0:19:51.17:0,51,2911	0/0:28,0:28:81.28:0,81,4442	0/0:17,0:17:51.18:0,51,2930	0/0:22,0:22:63.22:0,63,3650	0/0:24,0:24:66.21:0,66,3553	0/0:24,0:24:69.21:0,69,3903	0/0:21,0:21:63.22:0,63,3456	0/0:28,0:28:78.27:0,78,4548	0/0:33,0:33:93.32:0,93,5563	0/0:22,0:22:57.20:0,57,3353	0/0:33,0:33:96.31:0,96,5430	0/0:19,0:19:54.19:0,54,3052	0/0:23,0:23:63.20:0,63,3641	0/0:20,0:20:57.20:0,57,3254	0/0:21,0:21:60.21:0,60,3517	0/0:37,0:37:99:0,111,6278	0/0:24,0:23:72.25:0,72,4346	0/0:6,0:6:18.06:0,18,1089
chr10	43558980	.	T	TCG	5241.71	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-0.220;DP=681;FS=6.150;HRun=0;HaplotypeScore=137.2114;InbreedingCoeff=0.9447;MQ=60.23;MQ0=3;MQRankSum=0.854;QD=16.69;ReadPosRankSum=-0.779;VQSLOD=3.9928;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:43:82.57:0,83,658	0/0:2,0:4:8.97:0,9,73	0/0:24,0:15:19.12:0,19,293	0/0:16,0:11:24.01:0,24,239	1/1:25,1:25:56.20:410,56,0	0/0:14,0:20:49.01:0,49,379	0/0:20,0:23:59.93:0,60,518	1/1:25,0:25:58.88:423,59,0	0/0:13,0:30:68.87:0,69,593	1/1:7,31:40:84.37:937,84,0	1/1:14,5:19:38.09:339,38,0	0/0:6,0:15:11.21:0,11,104	0/0:7,0:12:13.85:0,14,150	0/0:17,0:30:15.29:0,15,341	0/0:20,0:29:50.54:0,51,424	0/0:16,0:28:24.13:0,24,311	0/0:23,0:26:69.56:0,70,805	1/1:2,18:20:7.84:284,8,0	1/1:22,0:22:39.78:328,40,0	1/1:3,18:23:15.05:233,15,0	1/1:42,2:44:95:714,95,0	0/0:10,0:15:33.79:0,34,269	0/0:13,0:25:37.84:0,38,293	0/0:12,0:26:4.06:0,4,179	1/1:12,4:17:41.84:389,42,0	1/1:26,0:26:70.97:532,71,0	1/1:4,24:33:28.37:440,28,0	1/1:0,17:18:14.64:211,15,0
chr10	43559017	.	T	TGC	3908.55	PASS	AB=0.852;AC=21;AF=0.375;AN=56;BaseQRankSum=1.821;DP=653;FS=3.314;HRun=0;HaplotypeScore=125.7427;InbreedingCoeff=0.7041;MQ=58.34;MQ0=5;MQRankSum=2.376;QD=15.03;ReadPosRankSum=5.028;VQSLOD=3.7162;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:29.11:0,29,338	0/0:4,0:4:5.92:0,6,39	0/0:29,0:16:34.94:0,35,372	0/0:31,0:19:39.57:0,40,441	0/1:17,0:17:17.72:157,0,18	0/0:18,0:18:16.13:0,16,223	0/0:18,0:18:44.72:0,45,348	0/0:37,0:36:93.87:0,94,750	0/0:32,0:32:61.48:0,61,454	1/1:22,6:28:45.06:610,45,0	1/1:3,13:15:7.96:97,8,0	0/0:27,0:25:28.02:0,28,241	0/0:13,0:13:14.35:0,14,145	0/0:25,0:25:12.28:0,12,243	0/0:28,0:28:41.93:0,42,345	0/1:24,0:24:6.48:6,0,101	0/0:38,0:38:99:0,102,989	1/1:10,6:16:16.75:342,17,0	1/1:16,0:15:15.56:205,16,0	1/1:22,4:26:58.96:505,59,0	1/1:41,2:43:36.32:592,36,0	0/0:13,0:13:20.22:0,20,172	0/0:19,0:19:10.99:0,11,96	0/0:27,0:27:2.87:0,3,163	1/1:2,13:15:7.33:218,7,0	0/1:9,16:25:23.17:358,0,23	1/1:24,3:27:55.67:601,56,0	1/1:4,2:6:17.39:218,17,0
chr10	43559359	.	T	TTTCA	16594.21	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-11.581;DP=579;FS=0.825;HRun=0;HaplotypeScore=83.8063;InbreedingCoeff=0.9914;MQ=67.56;MQ0=2;MQRankSum=-0.919;QD=43.44;ReadPosRankSum=0.833;VQSLOD=5.1184;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:16,26:41:75.26:1833,75,0	1/1:0,10:11:27.09:660,27,0	0/0:19,0:18:12.02:0,12,194	0/0:12,0:11:14.98:0,15,192	1/1:10,0:18:26.98:436,27,0	1/1:5,12:18:36.12:880,36,0	1/1:6,10:16:33.11:806,33,0	1/1:28,11:40:57.18:1274,57,0	1/1:6,18:24:54.19:1320,54,0	1/1:8,13:21:42.14:987,42,0	1/1:10,17:26:42.14:1020,42,0	0/0:18,0:18:39.13:0,39,639	0/0:14,0:14:30.10:0,30,493	0/0:16,0:16:33.11:0,33,543	0/0:21,0:21:51.16:0,51,814	0/0:22,0:22:39.13:0,39,641	0/0:26,0:26:69.21:0,69,1085	1/1:2,9:11:24.08:579,24,0	1/1:15,8:24:27.08:613,27,0	1/1:11,22:33:66.23:1600,66,0	1/1:3,11:14:30.10:734,30,0	0/0:12,0:13:21.06:0,21,321	0/0:18,0:18:45.15:0,45,739	0/0:18,0:18:48.12:0,48,750	1/1:6,8:15:24.08:586,24,0	1/1:8,15:24:48.16:1159,48,0	1/1:8,17:25:48.16:1173,48,0	1/1:6,12:18:39.13:934,39,0
chr10	43559717	.	C	CGA	1534.38	PASS	AB=0.778;AC=27;AF=0.500;AN=54;BaseQRankSum=0.987;DP=548;FS=0.000;HRun=0;HaplotypeScore=82.4918;InbreedingCoeff=0.1765;MQ=63.16;MQ0=8;MQRankSum=-0.163;QD=4.33;ReadPosRankSum=-1.356;VQSLOD=1.8353;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:25,14:39:37.75:77,0,38	1/1:4,0:4:3:25,3,0	./.	0/0:23,0:13:0:0,0,0	0/1:18,8:26:70.48:70,0,74	1/1:17,11:28:6.02:89,6,0	1/1:15,1:25:9.02:105,9,0	1/1:25,0:25:11.53:69,12,0	0/1:12,2:24:7.14:188,0,7	1/1:27,0:27:23.60:241,24,0	1/1:11,0:17:3:26,3,0	0/1:11,5:16:23.27:80,0,23	1/1:10,4:14:5.89:325,6,0	0/0:14,0:14:3:0,3,32	0/0:17,0:20:1.63:0,2,176	0/1:10,3:15:55.79:56,0,64	1/1:7,6:13:3.01:44,3,0	0/1:15,0:15:62.51:63,0,119	1/1:8,0:8:0.89:2,1,0	0/0:16,0:17:8.86:0,9,79	0/0:26,0:26:14.93:0,15,141	1/1:10,6:17:6.02:89,6,0	0/0:16,0:16:3.01:0,3,32	0/1:25,11:35:99:148,0,114	0/0:13,0:13:5.97:0,6,45	0/0:19,0:21:8.85:0,9,79	0/0:13,0:15:14.84:0,15,126	0/0:8,0:8:4.68:0,5,62
chr10	43562878	.	T	TCAC	1149.11	PASS	AB=1.000;AC=6;AF=0.107;AN=56;BaseQRankSum=-3.088;DP=564;FS=2.624;HRun=0;HaplotypeScore=106.3758;InbreedingCoeff=0.5828;MQ=62.58;MQ0=7;MQRankSum=-1.158;QD=17.41;ReadPosRankSum=-0.591;VQSLOD=3.4304;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:90.28:0,90,1259	0/0:4,0:4:9.02:0,9,110	0/0:23,0:11:9.03:0,9,125	0/0:30,0:25:33.14:0,33,442	0/0:19,0:18:30.86:0,31,325	0/0:18,0:18:39.10:0,39,517	0/0:24,0:24:66.12:0,66,837	0/0:16,0:16:27.05:0,27,318	0/0:23,0:23:57.17:0,57,788	0/0:14,0:12:16.77:0,17,214	0/1:14,0:13:1.43:1,0,74	0/0:27,0:26:59.71:0,60,831	0/0:17,0:17:39.11:0,39,526	0/0:24,0:24:54.15:0,54,731	1/1:6,8:14:21.07:423,21,0	1/1:4,19:23:42.06:843,42,0	0/0:40,0:40:84.15:0,84,1110	0/1:15,0:13:3.55:4,0,219	0/0:12,0:10:0.05:0,0,172	0/0:16,0:16:14:0,14,145	0/0:32,0:31:21.03:0,21,295	0/0:19,0:19:30.09:0,30,408	0/0:10,0:10:24.04:0,24,287	0/0:45,0:45:99:0,119,1563	0/0:11,0:11:8.82:0,9,254	0/0:14,0:14:26.88:0,27,332	0/0:11,0:11:14.73:0,15,146	0/0:3,0:3:8.96:0,9,102
chr10	43562911	.	C	CCATCACCATCATCAT	11427.46	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=-3.397;DP=647;FS=17.464;HRun=0;HaplotypeScore=251.3267;InbreedingCoeff=0.8893;MQ=65.43;MQ0=6;MQRankSum=-9.733;QD=53.15;ReadPosRankSum=-2.545;VQSLOD=2.5210;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,114,3794	0/0:5,0:5:15.05:0,15,429	0/0:35,0:19:50.91:0,51,1052	0/0:35,0:26:59.78:0,60,1595	1/1:7,11:21:11.74:683,12,0	0/0:13,0:13:39.13:0,39,1479	0/0:30,0:30:75.23:0,75,2246	0/0:28,0:28:63.20:0,63,1476	0/0:30,0:30:81.22:0,81,2489	1/1:5,11:22:36.47:1494,36,0	1/1:5,11:18:24.08:1262,24,0	0/0:21,0:21:63.21:0,63,2261	0/0:14,0:14:39.05:0,39,1352	0/0:26,0:26:69.22:0,69,2272	0/0:10,0:10:24.06:0,24,822	0/0:26,0:26:59.74:0,60,2034	0/0:40,0:40:99:0,114,4164	1/1:5,7:14:21.07:1254,21,0	1/1:6,9:16:45.15:1476,45,0	1/1:7,18:25:15.05:1045,15,0	0/1:31,0:31:17.38:725,0,17	0/0:10,0:10:26.98:0,27,973	0/0:13,0:12:30.10:0,30,1026	0/0:48,0:48:99:0,141,5100	1/1:5,7:15:6.02:393,6,0	1/1:12,8:23:51.63:2129,52,0	1/1:3,7:17:12.03:761,12,0	1/1:6,0:6:12.02:205,12,0
chr10	43563092	.	CAAAA	C	1996.40	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=3.131;DP=530;FS=2.971;HRun=17;HaplotypeScore=94.5688;InbreedingCoeff=0.8981;MQ=67.24;MQ0=8;MQRankSum=-0.825;QD=11.41;ReadPosRankSum=5.298;VQSLOD=-0.0039;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:43:99:0,108,1602	0/0:9,0:12:35.99:0,36,468	0/0:30,0:12:18.56:0,19,111	0/0:33,0:21:40.59:0,41,341	1/1:6,16:22:40.77:449,41,0	0/0:12,0:13:27.06:0,27,409	0/0:17,0:20:51.13:0,51,859	0/0:18,0:20:38.01:0,38,408	0/0:21,0:21:44.97:0,45,698	1/1:5,7:13:0.38:145,0,0	1/1:4,12:19:27.19:239,27,0	0/0:12,0:11:26.95:0,27,427	0/0:11,0:12:26.91:0,27,332	0/0:14,0:14:24:0,24,366	0/0:3,0:10:12.03:0,12,195	0/0:15,0:19:38.77:0,39,601	0/0:25,0:28:69.20:0,69,1172	1/1:9,13:24:4.70:147,5,0	1/1:9,5:16:17.19:131,17,0	1/1:3,11:14:9.74:256,10,0	1/1:4,14:18:14.92:190,15,0	0/0:15,0:16:41.82:0,42,470	0/0:14,0:16:34.05:0,34,519	0/0:18,0:27:36.01:0,36,597	1/1:9,0:9:11.73:97,12,0	1/1:6,9:16:28.02:291,28,0	1/1:6,12:19:16.43:220,16,0	1/1:3,1:5:4.04:41,4,0
chr10	43563903	.	GA	G	8504.45	PASS	AB=0.889;AC=21;AF=0.375;AN=56;BaseQRankSum=13.469;DP=674;FS=12.802;HRun=1;HaplotypeScore=71.1716;InbreedingCoeff=0.9164;MQ=87.41;MQ0=0;MQRankSum=-2.806;QD=38.48;ReadPosRankSum=2.023;VQSLOD=4.5313;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,135,2127	0/1:7,1:8:17.26:17,0,312	0/0:24,0:24:69.23:0,69,1082	0/0:21,0:22:44.45:0,44,826	0/0:23,0:23:66.20:0,66,1029	0/0:15,0:15:45.15:0,45,719	0/0:37,0:37:99:0,111,1771	0/0:30,0:30:90.27:0,90,1351	0/0:30,0:30:90.31:0,90,1431	1/1:0,24:24:72.24:1006,72,0	1/1:0,16:16:45.15:629,45,0	0/0:30,0:30:90.31:0,90,1439	0/0:17,0:17:51.16:0,51,790	0/0:20,0:20:60.20:0,60,959	0/0:19,0:19:57.19:0,57,910	0/0:19,0:19:54.17:0,54,836	0/0:37,0:37:99:0,108,1727	1/1:0,33:33:99:1384,99,0	1/1:0,12:12:36.05:432,36,0	1/1:0,13:13:30.10:420,30,0	1/1:0,49:49:99:2014,144,0	0/0:31,0:31:93.27:0,93,1437	0/0:27,0:27:81.25:0,81,1249	0/0:27,0:27:81.28:0,81,1289	1/1:0,17:17:42.14:587,42,0	1/1:0,25:25:72.24:1007,72,0	1/1:0,21:21:63.21:881,63,0	1/1:0,3:3:9.03:126,9,0
chr10	43565776	.	G	GA	4586.61	PASS	AB=0.529;AC=21;AF=0.389;AN=54;BaseQRankSum=-7.647;DP=430;FS=2.915;HRun=9;HaplotypeScore=49.0601;InbreedingCoeff=0.8607;MQ=60.77;MQ0=1;MQRankSum=-0.032;QD=24.14;ReadPosRankSum=-0.555;VQSLOD=5.3877;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:68.93:0,69,591	0/0:6,0:6:14.98:0,15,126	0/0:11,0:9:20.02:0,20,162	0/0:11,0:6:17:0,17,130	1/1:3,17:20:49.31:519,49,0	0/0:6,0:6:17.97:0,18,151	0/0:15,0:15:38.97:0,39,338	0/0:18,0:17:43.95:0,44,362	0/0:13,0:13:35.98:0,36,310	1/1:5,7:13:27.04:279,27,0	1/1:0,16:17:44.87:439,45,0	0/0:15,1:16:2.84:0,3,253	./.	0/0:10,0:10:26.98:0,27,231	0/0:16,0:16:44.91:0,45,378	0/0:13,1:14:2.79:0,3,251	0/0:24,1:25:35.81:0,36,540	1/1:5,12:17:11.13:296,11,0	1/1:4,20:23:60.14:653,60,0	1/1:4,12:16:33.09:365,33,0	1/1:2,12:16:13.71:331,14,0	0/0:16,0:16:38.99:0,39,338	0/0:20,0:20:32.76:0,33,283	0/0:13,0:13:29.98:0,30,260	0/1:1,8:9:11.01:118,0,11	1/1:4,16:20:48.10:519,48,0	1/1:1,13:15:39.41:413,39,0	1/1:1,20:23:62.95:655,63,0
chr10	43565929	.	A	ACTCCT	7236.56	PASS	AB=1.000;AC=22;AF=0.393;AN=56;BaseQRankSum=-8.754;DP=566;FS=0.972;HRun=0;HaplotypeScore=125.3783;InbreedingCoeff=0.7992;MQ=72.97;MQ0=9;MQRankSum=-2.068;QD=34.30;ReadPosRankSum=-2.440;VQSLOD=3.8846;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:25:36.70:0,37,478	0/0:0,0:3:0.68:0,1,62	0/0:46,0:23:20.77:0,21,234	0/0:73,0:39:14.16:0,14,322	0/0:13,0:12:30.09:0,30,513	0/1:5,0:14:6.25:6,0,154	0/1:7,0:20:12.30:12,0,170	0/0:24,0:24:28.58:0,29,486	0/0:1,0:15:18.37:0,18,314	1/1:7,12:21:45.15:1054,45,0	1/1:2,12:14:24.08:686,24,0	0/0:21,0:21:48.16:0,48,863	0/0:8,0:8:18.06:0,18,328	0/0:12,0:12:24.08:0,24,445	0/0:24,0:23:54.16:0,54,911	0/0:20,0:20:54.18:0,54,983	0/0:23,0:23:54.10:0,54,964	1/1:10,7:17:33.10:772,33,0	1/1:11,7:17:23.94:354,24,0	1/1:14,4:18:15.05:391,15,0	1/1:16,10:26:47.50:1109,48,0	0/0:15,0:15:36.12:0,36,641	0/0:11,0:11:21.05:0,21,345	0/0:22,0:22:50.95:0,51,806	1/1:11,4:15:26.73:508,27,0	1/1:2,17:22:63.14:1493,63,0	1/1:3,12:17:27.09:765,27,0	1/1:4,3:6:3.01:86,3,0
chr10	43567226	.	TTG	T	3124.45	PASS	AB=0.884;AC=26;AF=0.500;AN=52;BaseQRankSum=3.510;DP=764;FS=4.643;HRun=0;HaplotypeScore=129.5900;InbreedingCoeff=0.6112;MQ=61.44;MQ0=12;MQRankSum=1.160;QD=7.79;ReadPosRankSum=2.432;VQSLOD=3.3540;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:46:6.15:0,6,57	0/0:2,0:9:3:0,3,26	./.	./.	0/1:15,0:14:0.03:0,0,0	0/0:15,0:15:12:0,12,110	0/0:37,0:36:14.81:0,15,111	0/0:41,0:41:47.69:0,48,433	0/0:20,0:20:11.93:0,12,102	1/1:18,10:27:30:299,30,0	1/1:8,4:12:11.81:102,12,0	0/0:27,1:28:2.90:0,3,420	0/1:24,0:22:26.43:26,0,306	0/0:23,0:23:18.06:0,18,264	1/1:23,18:41:66.17:722,66,0	1/1:14,8:22:24.06:265,24,0	0/0:36,0:36:25.01:0,25,737	1/1:15,13:31:35.60:341,36,0	1/1:14,4:16:9.02:99,9,0	1/1:3,7:11:18.77:182,19,0	1/1:51,20:71:1.72:288,2,0	0/0:18,0:18:18:0,18,193	0/0:9,0:9:11.71:0,12,146	0/1:39,7:46:9.27:9,0,635	1/1:12,12:25:26.90:279,27,0	1/1:20,0:20:8.96:78,9,0	1/1:9,17:26:51.14:564,51,0	0/1:5,5:10:36.13:57,0,36
chr10	43568435	.	A	AG	15724.12	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=15.119;DP=656;FS=20.969;HRun=1;HaplotypeScore=102.5328;InbreedingCoeff=0.9977;MQ=94.80;MQ0=0;MQRankSum=-6.821;QD=37.80;ReadPosRankSum=0.716;VQSLOD=2.9514;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,29:31:75.25:1124,75,0	1/1:0,10:10:24.08:360,24,0	0/0:31,0:31:93.29:0,93,1187	0/0:29,0:29:84.24:0,84,1072	1/1:1,15:16:39.13:584,39,0	1/1:2,12:14:36.12:539,36,0	1/1:2,38:40:99:1529,102,0	1/1:3,26:29:75.20:1066,75,0	1/1:2,29:31:87.28:1285,87,0	1/1:3,17:20:51.17:751,51,0	1/1:0,8:8:21.07:315,21,0	0/0:25,0:25:75.23:0,75,959	0/0:32,0:32:93.30:0,93,1206	0/0:18,0:18:54.15:0,54,672	1/1:1,38:39:99:1574,105,0	1/1:0,28:28:78.26:1168,78,0	0/0:27,0:27:81.26:0,81,1051	1/1:0,19:19:51.17:764,51,0	1/1:2,16:18:48.15:689,48,0	1/1:1,9:10:20.81:314,21,0	1/1:0,31:31:75.25:1124,75,0	0/0:29,0:29:72.22:0,72,920	0/0:25,0:25:66.19:0,66,827	0/0:24,0:24:72.22:0,72,920	1/1:2,10:12:24.04:335,24,0	1/1:4,18:22:53.81:747,54,0	1/1:2,28:30:75.21:1099,75,0	1/1:0,8:8:24.08:360,24,0
chr10	43569593	.	GAAC	G	984.40	PASS	AB=0.955;AC=18;AF=0.346;AN=52;BaseQRankSum=-2.278;DP=384;FS=5.371;HRun=0;HaplotypeScore=84.4595;InbreedingCoeff=0.4725;MQ=41.98;MQ0=44;MQRankSum=-7.677;QD=5.76;ReadPosRankSum=0.103;VQSLOD=1.5149;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:22:42.07:0,42,639	0/0:4,0:4:12.04:0,12,195	./.	./.	0/1:17,0:14:1.07:1,0,79	0/0:19,0:16:36.09:0,36,542	0/0:18,0:15:36.01:0,36,517	0/0:19,0:16:41.96:0,42,518	0/0:15,0:14:30.03:0,30,442	1/1:11,2:11:14.56:117,15,0	1/1:9,1:9:9.39:126,9,0	0/0:6,0:6:6:0,6,70	0/0:4,0:3:2.90:0,3,35	0/0:7,0:6:5.99:0,6,65	1/1:17,0:17:11.80:42,12,0	0/0:9,0:8:2.97:0,3,34	0/0:35,0:33:43.60:0,44,574	0/1:17,0:15:2.53:52,0,3	1/1:14,2:12:14.94:127,15,0	1/1:10,1:11:21.71:170,22,0	0/1:16,0:8:28.79:29,0,72	0/0:6,0:5:8.90:0,9,82	0/0:12,0:11:15.74:0,16,143	0/0:19,0:12:5.21:0,5,87	0/1:9,3:11:2.50:207,0,3	0/1:12,1:10:7.45:64,0,7	0/1:13,0:11:40.78:95,0,41	1/1:15,1:13:17.29:130,17,0
chr10	43569606	.	AAC	A	1273.03	PASS	AB=0.977;AC=27;AF=0.482;AN=56;BaseQRankSum=-1.280;DP=441;FS=16.234;HRun=0;HaplotypeScore=94.9186;InbreedingCoeff=0.1741;MQ=42.68;MQ0=46;MQRankSum=-4.020;QD=4.16;ReadPosRankSum=-4.155;VQSLOD=-0.2492;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:21:33.36:0,33,510	0/0:7,0:7:20.72:0,21,202	0/0:7,0:1:2.50:0,2,9	0/1:15,0:5:4.05:4,0,11	1/1:24,0:20:4.07:49,4,0	0/0:20,0:17:39:0,39,465	0/0:17,0:16:41.62:0,42,438	0/0:19,0:16:47.69:0,48,469	0/0:15,0:14:35.85:0,36,390	1/1:18,0:15:4.65:118,5,0	1/1:14,0:13:15.19:116,15,0	0/1:5,0:5:33.27:33,0,43	0/1:7,0:6:17.58:34,0,18	0/1:7,0:6:16.50:17,0,29	0/0:16,0:16:5.43:0,5,16	0/0:10,0:8:2.51:0,3,31	0/1:34,0:32:4.47:4,0,356	1/1:11,0:9:11.46:58,11,0	0/1:22,0:16:47.47:96,0,47	1/1:15,1:16:27.94:205,28,0	0/1:12,6:9:47.02:47,0,48	0/1:9,0:8:42.23:55,0,42	0/1:15,0:14:35.36:35,0,81	0/1:19,0:11:17.97:18,0,38	1/1:18,0:17:23.96:172,24,0	1/1:23,0:20:26.94:137,27,0	0/1:16,0:14:2.36:105,0,2	1/1:15,0:13:23.36:151,23,0
chr10	43569608	.	CAAAAAAAAAA	C	1142.01	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-1.091;DP=456;FS=0.000;HRun=16;HaplotypeScore=147.1459;InbreedingCoeff=0.8191;MQ=42.56;MQ0=45;MQRankSum=-4.219;QD=42.30;ReadPosRankSum=2.937;VQSLOD=1.0589;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:22:56.87:0,57,1594	0/0:7,0:7:20.80:0,21,437	0/0:9,0:1:3.01:0,3,79	0/0:15,0:5:10.85:0,11,248	0/0:25,0:20:39.07:0,39,1300	0/0:20,0:17:39.13:0,39,1345	0/0:15,0:16:39.05:0,39,1113	0/0:19,0:16:43.96:0,44,1085	0/0:15,0:14:33.09:0,33,992	0/0:13,0:17:39:0,39,656	0/0:17,0:16:27.09:0,27,598	0/0:5,0:5:12.50:0,13,253	0/0:7,0:6:12.04:0,12,351	0/0:10,0:9:21.07:0,21,548	1/1:1,16:17:39.13:1046,39,0	1/1:4,6:8:9:210,9,0	0/0:31,0:35:73.46:0,73,2635	0/0:10,0:8:18.02:0,18,400	0/0:23,0:17:37.89:0,38,760	0/0:13,0:14:27.52:0,28,561	0/0:19,0:10:12.87:0,13,240	0/0:7,0:8:18.04:0,18,525	0/0:13,0:14:29.98:0,30,788	0/0:16,0:10:18.01:0,18,495	0/0:18,0:17:41.64:0,42,915	0/0:25,0:22:57.02:0,57,1116	0/0:14,0:12:27.09:0,27,653	0/0:16,0:14:32.89:0,33,405
chr10	43569610	.	A	AC	256.17	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-1.053;DP=453;FS=8.227;HRun=0;HaplotypeScore=102.3893;InbreedingCoeff=0.8049;MQ=43.11;MQ0=43;MQRankSum=6.470;QD=2.49;ReadPosRankSum=2.325;VQSLOD=2.3256;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:23,1:22:12.19:51,12,0	1/1:7,0:7:4.13:18,4,0	0/0:13,0:2:2.60:0,3,11	0/0:19,0:6:7.62:0,8,68	0/0:24,0:19:23.52:0,24,118	1/1:20,1:18:14.88:75,15,0	1/1:16,0:16:9.13:47,9,0	1/1:19,1:17:29.76:170,30,0	1/1:14,1:14:13.91:66,14,0	0/0:20,0:17:32.01:0,32,199	0/0:16,0:15:23.14:0,23,173	0/0:5,0:5:3.90:0,4,28	0/0:7,0:6:4.47:0,4,57	0/0:10,0:9:18.30:0,18,126	0/0:17,0:17:20.16:0,20,202	0/0:9,0:7:11.87:0,12,81	0/0:32,0:30:48.99:0,49,493	0/0:11,0:9:20.21:0,20,133	0/0:25,0:18:34.53:0,35,326	0/0:13,0:13:29.20:0,29,195	0/0:18,0:11:11.96:0,12,107	0/0:8,0:7:10.69:0,11,40	0/0:14,0:13:20.38:0,20,101	0/0:17,0:10:7.86:0,8,60	0/0:17,0:16:38.73:0,39,255	0/0:24,0:21:48.88:0,49,331	0/0:14,0:12:23.08:0,23,184	0/0:17,0:15:31.94:0,32,210
chr10	43569613	.	A	AAAAC	655	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=2.266;DP=457;FS=3.350;HRun=0;HaplotypeScore=124.1987;InbreedingCoeff=0.1124;MQ=46.87;MQ0=40;MQRankSum=-1.769;QD=6.55;ReadPosRankSum=-1.509;VQSLOD=2.2456;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:22:26.62:0,27,585	0/0:7,0:7:21.02:0,21,242	0/0:18,0:6:2.70:0,3,33	0/0:20,0:6:11.92:0,12,128	1/1:4,17:20:33.35:683,33,0	0/0:21,0:18:42.26:0,42,557	0/0:14,0:14:39.05:0,39,518	0/0:19,0:18:39.98:0,40,494	0/0:14,0:13:32.90:0,33,409	0/1:19,0:16:18.62:19,0,122	0/1:16,0:15:37.10:37,0,115	0/0:6,0:6:9.51:0,10,45	0/0:7,0:6:8.86:0,9,102	0/0:10,0:9:17.22:0,17,135	0/0:17,0:17:24.74:0,25,354	0/0:8,0:6:8.22:0,8,58	0/0:32,0:30:56.71:0,57,712	0/1:13,0:11:21.72:22,0,70	0/0:27,0:20:26.19:0,26,253	0/0:13,0:13:15.01:0,15,154	0/0:15,0:10:11.70:0,12,111	0/1:10,0:9:14.37:14,0,31	0/0:16,0:15:22.29:0,22,131	0/0:16,0:9:20.53:0,21,141	0/0:17,0:16:14.34:0,14,135	0/0:23,0:20:15.41:0,15,158	0/0:13,0:11:2.36:0,2,101	0/1:17,0:15:13.87:14,0,127
chr10	43569950	.	AAG	A	3532.44	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=7.798;DP=493;FS=2.062;HRun=0;HaplotypeScore=102.2401;InbreedingCoeff=0.9579;MQ=54.91;MQ0=25;MQRankSum=-4.674;QD=31.26;ReadPosRankSum=1.679;VQSLOD=5.8112;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:51.17:0,51,873	0/0:8,0:8:20.97:0,21,308	0/0:44,1:21:14.82:0,15,662	0/0:60,0:16:29.74:0,30,435	0/0:16,0:14:36.11:0,36,613	0/0:15,0:14:36.02:0,36,559	0/0:20,0:18:51.17:0,51,903	0/0:25,0:24:62.87:0,63,1079	0/0:10,0:10:24.08:0,24,424	1/1:1,11:12:33.10:454,33,0	1/1:0,3:3:6.02:85,6,0	0/0:12,0:12:33.11:0,33,580	0/0:20,0:20:54.12:0,54,852	0/0:14,0:14:39.09:0,39,628	0/0:12,0:12:16.88:0,17,275	0/0:19,0:19:39.60:0,40,677	0/0:33,0:33:84.13:0,84,1447	1/1:5,12:16:36:433,36,0	1/1:6,5:7:15.02:192,15,0	1/1:5,8:13:24.06:306,24,0	1/1:0,3:3:9.03:122,9,0	0/0:14,0:11:30.10:0,30,538	0/0:8,0:8:19.31:0,19,327	0/0:24,0:23:53.91:0,54,927	1/1:1,9:10:29.92:359,30,0	1/1:1,14:14:42.14:583,42,0	1/1:6,19:25:63.21:869,63,0	1/1:2,2:4:9.03:128,9,0
chr10	43569959	.	AAAAGAAAGAGAGAGAGAGAGAGAGAGAGAG	A	5973.89	PASS	AB=1.000;AC=22;AF=0.393;AN=56;BaseQRankSum=10.552;DP=472;FS=1.518;HRun=0;HaplotypeScore=287.7570;InbreedingCoeff=0.7734;MQ=50.63;MQ0=32;MQRankSum=-5.966;QD=41.78;ReadPosRankSum=1.806;VQSLOD=3.2699;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:42.08:0,42,1711	0/0:7,0:7:18.06:0,18,858	0/0:38,0:17:5.69:0,6,515	0/0:55,0:12:14.35:0,14,387	0/0:14,0:13:16.38:0,16,778	0/0:14,0:13:32.66:0,33,1264	0/0:21,0:19:54.16:0,54,1497	0/0:27,0:25:66.69:0,67,2028	0/0:9,0:9:27.09:0,27,1730	1/1:14,0:14:36.07:482,36,0	1/1:3,1:3:9.03:226,9,0	0/0:11,0:11:33.10:0,33,2007	0/0:18,0:18:51.17:0,51,2901	0/0:13,0:13:36.10:0,36,1675	0/1:11,0:10:81.31:81,0,405	0/1:19,0:18:90.60:91,0,750	0/0:31,0:30:81.21:0,81,4968	1/1:11,4:13:33.11:1135,33,0	1/1:11,0:7:17.78:188,18,0	1/1:9,1:10:17.98:289,18,0	1/1:4,0:4:3.01:50,3,0	0/0:14,0:11:30.10:0,30,900	0/0:10,0:10:21.06:0,21,787	0/0:23,0:22:54.02:0,54,1188	1/1:8,2:9:14.98:516,15,0	1/1:13,3:14:42.03:1240,42,0	1/1:19,5:24:56.80:1562,57,0	1/1:5,0:4:6.02:115,6,0
chr10	43569965	.	AAGAGAGAG	A	2484.63	PASS	AC=30;AF=0.714;AN=42;BaseQRankSum=2.740;DP=469;FS=3.674;HRun=0;HaplotypeScore=138.0029;InbreedingCoeff=0.6324;MQ=48.79;MQ0=40;MQRankSum=-3.244;QD=12.36;ReadPosRankSum=1.367;VQSLOD=2.4721;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:25:5.98:0,6,48	1/1:3,6:8:6.02:149,6,0	0/0:37,0:16:0.47:0,0,1	./.	0/0:13,0:12:6.02:0,6,176	./.	1/1:20,0:18:6.01:59,6,0	0/0:26,0:24:3.01:0,3,40	1/1:9,0:9:12.03:234,12,0	./.	1/1:4,0:3:3.01:46,3,0	0/0:10,0:11:9.62:0,10,124	1/1:13,6:19:21.06:452,21,0	1/1:11,0:10:12.03:205,12,0	1/1:5,0:9:12.04:178,12,0	1/1:11,0:21:11.76:194,12,0	0/0:29,0:30:25.55:0,26,558	1/1:16,0:13:12.04:218,12,0	./.	1/1:8,0:8:3.01:50,3,0	./.	1/1:12,6:16:5.98:94,6,0	1/1:6,5:11:9.03:201,9,0	./.	1/1:9,0:8:6.02:106,6,0	1/1:14,0:12:9.03:167,9,0	1/1:20,0:20:15.05:273,15,0	./.
chr10	43569988	.	AG	A	1656.55	PASS	AB=0.693;AC=14;AF=0.250;AN=56;BaseQRankSum=8.509;DP=413;FS=15.080;HRun=1;HaplotypeScore=85.3750;InbreedingCoeff=0.4707;MQ=45.88;MQ0=49;MQRankSum=-7.066;QD=18.41;ReadPosRankSum=3.094;VQSLOD=2.7459;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:24:24.18:0,24,274	0/0:10,0:9:9.03:0,9,114	0/0:12,0:3:9.03:0,9,112	0/0:33,0:4:4.26:0,4,41	0/0:8,0:6:9.03:0,9,132	0/0:14,0:13:27.09:0,27,341	0/0:16,0:13:27.07:0,27,332	0/0:19,0:18:50.51:0,51,596	0/0:16,0:16:41.56:0,42,466	0/1:3,5:8:21.38:177,0,21	1/1:2,3:3:6.02:78,6,0	0/0:18,0:15:36.19:0,36,320	0/0:17,0:17:28.79:0,29,327	0/0:11,0:10:23.29:0,23,270	0/0:13,0:10:18.41:0,18,185	0/0:19,0:18:10.22:0,10,194	0/0:36,0:32:77.79:0,78,724	0/1:9,3:9:18.97:146,0,19	0/1:4,5:6:57.29:68,0,57	0/1:3,2:5:13.28:106,0,13	0/0:5,0:4:1.43:0,1,13	0/0:15,0:12:11.83:0,12,152	0/0:15,0:14:16.39:0,16,193	0/0:20,0:17:12.04:0,12,152	1/1:3,3:5:14.98:175,15,0	1/1:6,13:15:44.93:529,45,0	1/1:7,10:17:37.10:509,37,0	1/1:4,5:6:3.01:40,3,0
chr10	43570389	.	GGT	G	993.02	PASS	AB=0.878;AC=36;AF=0.750;AN=48;BaseQRankSum=2.431;DP=507;FS=1.157;HRun=0;HaplotypeScore=94.8935;InbreedingCoeff=0.2187;MQ=61.31;MQ0=25;MQRankSum=-2.431;QD=2.89;ReadPosRankSum=1.322;VQSLOD=2.1539;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,3:28:3.49:0,3,256	0/0:6,0:5:8.56:0,9,70	./.	./.	1/1:9,0:11:2.84:14,3,0	0/1:15,0:17:7.65:8,0,39	1/1:16,4:22:17.79:150,18,0	./.	1/1:9,1:9:3.01:31,3,0	1/1:18,2:19:6.01:65,6,0	1/1:5,5:10:8.98:84,9,0	1/1:9,0:15:8.64:47,9,0	1/1:7,0:8:2.84:14,3,0	1/1:7,0:12:8.52:42,9,0	1/1:17,0:18:5.68:28,6,0	0/1:8,0:11:8.26:8,0,9	1/1:27,4:32:14.86:143,15,0	1/1:9,8:17:24.06:259,24,0	1/1:18,2:18:3:31,3,0	0/1:19,2:21:18.92:25,0,19	0/1:40,4:41:18.80:26,0,19	1/1:20,0:20:2:26,2,0	1/1:10,0:12:5.77:31,6,0	0/0:23,0:27:2.99:0,3,23	./.	0/0:18,0:18:3.01:0,3,38	1/1:12,0:15:12.72:68,13,0	1/1:4,1:3:3.01:32,3,0
chr10	43571388	.	G	GAAGAAAGAAAGA	2465.27	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=0.297;DP=578;FS=1.933;HRun=0;HaplotypeScore=201.5528;InbreedingCoeff=0.4786;MQ=63.86;MQ0=4;MQRankSum=-2.449;QD=18.40;ReadPosRankSum=-0.248;VQSLOD=2.6349;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:62.62:0,63,1389	0/0:1,0:4:1.55:0,2,4	0/0:11,0:10:3.01:0,3,51	0/0:15,0:7:2.94:0,3,22	1/1:34,0:32:60.38:984,60,0	0/0:4,0:17:7.77:0,8,19	0/0:3,0:17:5.55:0,6,13	0/0:25,0:25:19.16:0,19,438	0/0:3,0:22:10.88:0,11,26	0/0:26,0:26:13.77:0,14,649	0/1:24,0:24:22.89:23,0,630	0/0:16,0:16:36.12:0,36,982	0/0:12,0:12:33.11:0,33,1046	0/0:15,0:15:33.11:0,33,1014	1/1:24,0:24:51.12:1411,51,0	1/1:2,13:20:3.01:177,3,0	0/0:31,0:31:60.20:0,60,1655	0/0:35,0:35:35.37:0,35,832	0/1:13,0:11:9.71:10,0,281	0/1:19,0:19:1.82:2,0,554	0/0:13,0:13:15.91:0,16,263	0/0:17,0:17:36.11:0,36,1011	0/0:28,0:28:66.20:0,66,1652	0/0:21,0:20:45.11:0,45,995	0/0:19,0:19:27.09:0,27,624	0/0:18,0:18:39.93:0,40,667	0/0:29,0:29:41.20:0,41,924	0/0:20,0:19:27.49:0,27,681
chr10	43571407	.	GAAAA	G	7280.40	PASS	AB=0.986;AC=24;AF=0.429;AN=56;BaseQRankSum=6.810;DP=574;FS=0.000;HRun=7;HaplotypeScore=99.6550;InbreedingCoeff=0.6743;MQ=60.37;MQ0=8;MQRankSum=2.049;QD=22.20;ReadPosRankSum=0.963;VQSLOD=1.2789;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:31.69:0,32,1504	0/0:4,0:4:6.01:0,6,82	0/0:12,0:2:3.89:0,4,30	0/1:16,0:4:15.41:15,0,16	0/1:35,0:33:6.59:290,0,7	0/0:14,0:14:18.05:0,18,312	0/0:18,0:18:24.02:0,24,274	0/1:31,0:31:99:138,0,587	0/0:21,0:21:27.09:0,27,504	1/1:5,19:24:57.12:869,57,0	1/1:1,20:21:56.70:799,57,0	0/0:15,0:15:45.13:0,45,969	0/0:16,0:16:45.13:0,45,989	0/0:15,0:15:42.11:0,42,903	0/1:26,0:26:94.58:95,0,515	0/0:14,0:14:6.01:0,6,62	0/0:26,0:25:72.22:0,72,1686	1/1:0,36:36:48.10:824,48,0	1/1:2,12:12:35.94:400,36,0	1/1:0,15:15:44.83:628,45,0	1/1:0,17:17:18.06:323,18,0	0/0:14,0:14:42.11:0,42,918	0/0:30,0:30:87.10:0,87,1750	0/0:19,0:18:48.12:0,48,949	1/1:1,20:21:27.09:484,27,0	1/1:0,22:22:66.12:965,66,0	1/1:0,33:33:41.66:751,42,0	1/1:2,14:15:39.13:699,39,0
chr10	43572251	.	CGT	C	658.24	PASS	AB=0.913;AC=21;AF=0.404;AN=52;BaseQRankSum=-0.034;DP=485;FS=4.261;HRun=0;HaplotypeScore=84.8908;InbreedingCoeff=0.4194;MQ=64.72;MQ0=17;MQRankSum=3.217;QD=3.43;ReadPosRankSum=3.323;VQSLOD=1.7063;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:24:0.01:0,0,20	1/1:2,0:3:2.80:13,3,0	./.	./.	1/1:18,0:20:2.14:13,2,0	1/1:19,0:20:2.25:12,2,0	0/0:23,0:21:4.34:0,4,26	0/0:23,0:23:8.91:0,9,61	0/0:20,0:20:0.47:0,0,1	0/1:10,1:10:19.61:20,0,51	0/0:19,0:20:12.01:0,12,138	1/1:8,1:8:6:57,6,0	0/0:12,1:12:2.37:0,2,16	1/1:8,6:14:3.01:32,3,0	1/1:17,0:18:17.97:108,18,0	0/1:18,3:20:11.44:59,0,11	0/1:17,1:16:20.78:21,0,86	0/0:9,0:11:15.59:0,16,106	0/0:15,0:14:6:0,6,52	0/0:7,0:6:3:0,3,27	0/0:35,0:35:12.03:0,12,112	1/1:12,1:13:12.35:84,12,0	1/1:18,3:21:19.87:160,20,0	1/1:22,1:23:26.72:244,27,0	0/0:20,0:24:9.02:0,9,113	0/0:16,0:16:16.20:0,16,127	0/0:9,0:15:2.83:0,3,26	0/0:8,0:8:9.01:0,9,97
chr10	43572298	.	ATG	A	102.57	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=4.257;DP=517;FS=1.080;HRun=0;HaplotypeScore=81.2528;InbreedingCoeff=0.5886;MQ=53.03;MQ0=24;MQRankSum=-1.601;QD=1.10;ReadPosRankSum=-0.733;VQSLOD=1.2397;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,25:36:5.29:57,5,0	1/1:4,1:5:9.03:109,9,0	0/1:9,0:2:5.96:6,0,44	0/0:13,0:6:5.85:0,6,136	0/0:24,0:24:3.72:0,4,255	1/1:11,15:25:2.94:36,3,0	0/0:8,10:16:0.85:0,1,2	0/0:20,0:15:39.11:0,39,526	1/1:14,1:14:3.46:25,3,0	0/0:24,0:22:13.77:0,14,638	0/0:22,0:21:1.91:0,2,420	0/0:9,0:7:18.53:0,19,265	0/0:9,0:8:11.70:0,12,134	0/0:13,0:12:14.94:0,15,199	0/0:15,0:15:20.58:0,21,329	0/0:17,0:16:7.60:0,8,271	0/0:23,0:19:44.36:0,44,579	0/0:11,0:11:22.70:0,23,295	0/0:15,0:14:24.03:0,24,348	0/0:15,0:14:27.94:0,28,541	0/0:38,0:35:55.35:0,55,766	0/0:25,0:24:34.83:0,35,421	0/0:19,0:17:33:0,33,348	0/0:25,0:24:29.13:0,29,400	0/0:23,0:23:39.13:0,39,595	0/0:19,0:19:36.17:0,36,520	0/0:18,0:17:29.67:0,30,425	0/0:7,1:8:18.04:0,18,238
chr10	43572351	.	G	GT	534.01	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=1.120;DP=447;FS=8.582;HRun=9;HaplotypeScore=48.5933;InbreedingCoeff=0.8420;MQ=75.84;MQ0=2;MQRankSum=1.655;QD=13.02;ReadPosRankSum=-0.116;VQSLOD=2.2842;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,1:32:20.64:0,21,390	0/0:3,0:3:9:0,9,78	0/0:26,0:20:29.16:0,29,230	0/0:16,0:11:2.06:0,2,73	1/1:4,0:19:30.80:162,31,0	0/0:25,0:25:41.99:0,42,364	0/0:17,0:17:35.99:0,36,312	0/0:28,0:28:68.88:0,69,587	0/0:12,0:12:23.98:0,24,208	0/0:17,0:17:47.99:0,48,417	0/0:15,0:15:41.98:0,42,364	0/0:9,0:10:26.02:0,26,214	0/0:7,0:7:20.97:0,21,177	0/0:10,0:10:26.98:0,27,234	1/1:3,8:12:20.95:215,21,0	1/1:1,9:10:27.07:298,27,0	0/0:21,0:21:56.98:0,57,495	0/0:9,0:9:17.96:0,18,156	0/0:18,0:16:26.81:0,27,220	0/0:14,0:14:41.98:0,42,360	0/0:24,0:24:59.98:0,60,520	0/0:18,0:18:34.56:0,35,386	0/0:13,0:13:35.99:0,36,312	0/0:25,0:25:59.90:0,60,505	0/0:13,0:13:35.99:0,36,312	0/0:13,1:14:5.81:0,6,279	0/0:16,0:16:38.97:0,39,338	0/0:3,0:3:6:0,6,52
chr10	43572778	.	A	AAAAC	6376.81	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=-10.496;DP=450;FS=2.118;HRun=0;HaplotypeScore=64.2382;InbreedingCoeff=0.8797;MQ=54.15;MQ0=17;MQRankSum=-3.127;QD=33.04;ReadPosRankSum=-1.276;VQSLOD=4.4394;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:33:66.07:0,66,1055	0/0:6,0:6:9.03:0,9,148	0/1:11,0:4:1.07:1,0,136	0/0:15,0:12:27.07:0,27,376	0/0:13,0:10:27.09:0,27,443	0/0:12,0:12:35.79:0,36,550	0/0:28,0:25:51.16:0,51,813	1/1:14,10:24:36.08:705,36,0	0/0:18,0:16:33.11:0,33,537	1/1:3,6:8:21.05:462,21,0	1/1:3,7:8:18.06:438,18,0	0/0:15,0:15:33.11:0,33,541	0/0:10,0:10:14.70:0,15,245	0/0:5,0:5:12.04:0,12,197	0/0:19,0:18:27.09:0,27,439	0/0:13,0:11:21.07:0,21,344	0/0:37,0:36:87.30:0,87,1421	1/1:8,13:19:33.11:805,33,0	1/1:14,9:28:1.91:871,2,0	1/1:3,3:5:9.03:219,9,0	1/1:7,17:24:51.17:1210,51,0	0/0:8,0:8:21.07:0,21,344	0/0:5,0:5:15.04:0,15,223	0/0:19,0:19:48.15:0,48,763	1/1:3,5:7:12.04:292,12,0	1/1:9,8:12:24.08:585,24,0	1/1:8,9:15:28.34:641,28,0	1/1:2,4:5:6.02:146,6,0
chr10	43572908	.	CT	C	4483.78	PASS	AB=0.783;AC=36;AF=0.643;AN=56;BaseQRankSum=5.366;DP=439;FS=1.444;HRun=12;HaplotypeScore=50.5391;InbreedingCoeff=0.8165;MQ=59.41;MQ0=7;MQRankSum=-2.718;QD=14.37;ReadPosRankSum=1.255;VQSLOD=5.3944;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,24:27:40.72:422,41,0	1/1:1,7:8:20.92:163,21,0	0/1:8,1:8:14.30:14,0,38	0/0:8,0:6:9:0,9,84	0/0:30,3:33:59.68:0,60,749	1/1:1,15:17:43.87:331,44,0	0/1:4,4:8:5.27:98,0,5	1/1:8,26:34:76.71:582,77,0	1/1:1,7:9:22.96:168,23,0	1/1:3,13:16:38.33:288,38,0	1/1:4,13:18:37.89:284,38,0	0/0:12,0:12:33.02:0,33,318	0/0:10,0:10:23.94:0,24,229	0/0:7,0:7:15.03:0,15,152	1/1:5,0:15:18.32:53,18,0	1/1:2,0:10:18.33:53,18,0	0/0:30,0:31:62.94:0,63,616	1/1:4,20:24:54.65:420,55,0	1/1:7,12:16:2.41:200,2,0	1/1:2,12:16:27.95:198,28,0	1/1:5,8:13:17.92:139,18,0	0/0:8,0:8:21.03:0,21,207	0/0:8,0:8:21.04:0,21,213	0/0:9,0:9:14.92:0,15,152	1/1:3,17:22:54.57:394,55,0	1/1:3,13:17:34.87:259,35,0	1/1:3,14:17:32.85:255,33,0	1/1:1,8:8:20.92:163,21,0
chr10	43573185	.	C	CT	930.62	PASS	AB=0.877;AC=28;AF=0.500;AN=56;BaseQRankSum=2.137;DP=510;FS=3.092;HRun=17;HaplotypeScore=89.3527;InbreedingCoeff=0.0346;MQ=62.36;MQ0=13;MQRankSum=-1.679;QD=2.49;ReadPosRankSum=-2.640;VQSLOD=-0.7225;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,2:36:2.23:0,2,145	0/1:8,0:9:0.86:1,0,37	0/1:23,0:16:3.15:3,0,12	0/0:12,0:7:4.41:0,4,16	1/1:18,3:31:17.69:169,18,0	0/0:12,0:12:11.23:0,11,61	0/1:14,1:14:13.41:13,0,36	0/1:13,0:17:20.59:21,0,32	0/0:21,1:20:11.44:0,11,127	0/1:15,0:15:3.74:45,0,4	1/1:11,5:16:11.61:93,12,0	0/0:17,4:17:13.08:0,13,63	0/0:12,1:9:12.56:0,13,58	0/1:11,2:12:7.73:17,0,8	1/1:19,1:22:14.15:103,14,0	1/1:8,0:8:5.01:19,5,0	0/1:19,1:23:12.01:12,0,73	0/1:9,9:20:19.40:96,0,19	1/1:11,2:14:5.38:98,5,0	0/1:6,4:11:3.78:43,0,4	1/1:16,5:21:5.26:111,5,0	0/1:12,1:17:4.23:4,0,55	0/0:11,0:11:1.29:0,1,5	0/1:21,0:24:12:12,0,59	0/1:7,2:11:0.95:51,0,1	0/1:13,8:19:26.02:84,0,26	1/1:22,4:21:11.22:63,11,0	0/1:6,1:7:7.64:36,0,8
chr10	43573959	.	AT	A	1020.99	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-2.181;DP=426;FS=0.000;HRun=12;HaplotypeScore=50.7080;InbreedingCoeff=0.8302;MQ=56.94;MQ0=29;MQRankSum=3.045;QD=10.64;ReadPosRankSum=3.767;VQSLOD=2.7002;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,28:34:44.79:348,45,0	1/1:1,8:9:20.86:157,21,0	0/0:18,0:4:6:0,6,53	0/0:14,0:6:2.84:0,3,21	0/0:14,2:16:12.82:0,13,305	1/1:1,17:19:29.29:310,29,0	1/1:2,16:18:20.92:162,21,0	0/0:10,3:14:8.63:0,9,135	1/1:3,10:14:28.92:215,29,0	0/0:1,0:4:8.52:0,9,43	0/0:1,0:8:14.42:0,14,81	0/0:5,0:5:9.01:0,9,85	0/0:5,0:6:14.84:0,15,128	0/0:8,0:8:21:0,21,202	0/0:5,0:14:14.26:0,14,87	0/0:2,0:9:14.36:0,14,81	0/0:40,1:41:99:0,99,972	0/0:8,0:24:22.84:0,23,119	0/0:6,1:10:23.23:0,23,139	0/0:6,0:10:14.44:0,14,82	0/0:6,0:16:11.36:0,11,58	0/0:3,0:3:6.01:0,6,61	0/0:7,0:6:14.90:0,15,121	0/0:17,1:18:15.77:0,16,320	0/0:2,0:11:20:0,20,105	0/0:6,0:24:57.43:0,57,311	0/0:6,0:17:25.83:0,26,140	0/0:7,0:7:11.92:0,12,91
chr10	43574726	.	CGT	C	457.66	PASS	AB=0.883;AC=20;AF=0.385;AN=52;BaseQRankSum=1.677;DP=510;FS=14.018;HRun=0;HaplotypeScore=76.6944;InbreedingCoeff=-0.1687;MQ=65.90;MQ0=16;MQRankSum=0.276;QD=1.48;ReadPosRankSum=0.800;VQSLOD=0.2211;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:27:19.11:0,19,148	0/0:7,0:7:6:0,6,61	./.	./.	0/1:13,0:22:8.64:9,0,24	0/0:21,0:21:10.44:0,10,80	0/0:17,0:17:20.98:0,21,203	1/1:25,0:25:0.47:1,0,0	0/0:18,0:17:7.81:0,8,56	0/1:29,1:29:17.41:17,0,138	0/1:8,0:10:29.33:29,0,36	0/0:8,0:7:8.51:0,9,111	0/1:8,1:8:17.36:17,0,144	0/1:8,1:9:26.40:26,0,38	1/1:6,4:12:23.73:222,24,0	1/1:6,5:13:11.62:107,12,0	0/1:22,4:25:40.75:41,0,224	0/0:21,0:21:33.07:0,33,446	0/0:17,0:16:13.28:0,13,161	0/1:18,2:20:14.36:14,0,202	0/1:28,5:32:58.29:58,0,324	0/0:10,0:11:9.03:0,9,131	0/1:7,3:8:7.97:27,0,8	0/1:13,2:15:8.33:8,0,287	0/1:16,0:15:6.16:6,0,186	0/1:21,0:20:4.85:5,0,132	0/1:14,2:16:11.33:11,0,245	0/1:16,3:19:11.36:11,0,224
chr10	43576378	.	CGTGTGTGGTGTGTG	C	7748.14	PASS	AB=0.795;AC=19;AF=0.339;AN=56;BaseQRankSum=1.623;DP=732;FS=1.782;HRun=0;HaplotypeScore=288.0983;InbreedingCoeff=0.8354;MQ=63.79;MQ0=12;MQRankSum=-4.236;QD=36.04;ReadPosRankSum=4.750;VQSLOD=3.7588;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:47:48.06:0,48,2190	0/0:7,0:12:11.08:0,11,632	0/0:50,0:27:13.53:0,14,402	0/0:59,0:28:21.65:0,22,576	0/0:7,0:14:18.06:0,18,258	0/0:17,0:26:52.73:0,53,2585	0/0:19,0:27:22.89:0,23,1071	0/0:20,0:25:15.05:0,15,273	0/0:19,0:34:51.18:0,51,2912	1/1:12,15:27:42.08:1453,42,0	1/1:3,8:11:21.07:822,21,0	0/0:18,0:24:42.11:0,42,2097	0/0:13,0:22:45.11:0,45,2281	0/0:14,0:21:24.08:0,24,1321	0/0:11,0:27:39.13:0,39,549	0/0:8,0:20:33.11:0,33,461	0/0:36,0:36:72.25:0,72,4669	1/1:9,6:15:3.01:117,3,0	1/1:15,3:16:9.03:278,9,0	1/1:11,10:21:24.05:843,24,0	0/1:26,9:34:99:110,0,116	0/0:19,0:24:18.25:0,18,759	0/0:11,0:15:12.93:0,13,618	0/0:31,0:33:37.17:0,37,1991	1/1:6,11:17:30.10:1175,30,0	1/1:21,18:39:51.15:1895,51,0	1/1:16,9:25:22.80:937,23,0	1/1:2,5:7:3.01:117,3,0
chr10	43577356	.	CT	C	2955.73	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=10.107;DP=757;FS=8.923;HRun=2;HaplotypeScore=75.2496;InbreedingCoeff=0.9996;MQ=82.50;MQ0=0;MQRankSum=-1.869;QD=36.49;ReadPosRankSum=1.594;VQSLOD=3.9873;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,111,1643	0/0:10,0:10:30.10:0,30,450	0/0:27,0:27:81.26:0,81,1175	0/0:31,0:31:36.29:0,36,985	0/0:20,0:20:60.19:0,60,879	0/0:24,0:24:72.24:0,72,1079	0/0:29,0:29:87.29:0,87,1302	0/0:26,0:26:78.26:0,78,1151	0/0:32,0:32:96.28:0,96,1393	0/0:25,0:25:72.24:0,72,1080	0/0:18,0:18:48.15:0,48,698	0/0:33,0:33:99:0,99,1482	0/0:28,0:28:84.28:0,84,1259	0/0:20,0:20:60.20:0,60,899	1/1:0,38:38:99:1480,114,0	1/1:0,43:43:99:1597,123,0	0/0:34,0:34:99:0,102,1483	0/0:18,0:18:54.18:0,54,804	0/0:19,0:19:57.19:0,57,854	0/0:16,0:16:48.15:0,48,698	0/0:46,0:46:99:0,135,2001	0/0:28,0:28:81.25:0,81,1174	0/0:24,0:24:72.23:0,72,1057	0/0:44,0:44:99:0,129,1931	0/0:15,0:15:42.14:0,42,630	0/0:27,0:27:75.21:0,75,1065	0/0:29,0:29:84.28:0,84,1257	0/0:16,0:16:48.16:0,48,715
chr10	43578952	.	GAA	G	4634.21	PASS	AB=0.571;AC=37;AF=0.661;AN=56;BaseQRankSum=3.157;DP=281;FS=11.249;HRun=11;HaplotypeScore=38.7725;InbreedingCoeff=0.8222;MQ=67.57;MQ0=4;MQRankSum=0.741;QD=22.50;ReadPosRankSum=1.819;VQSLOD=2.5053;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,14:14:30.08:319,30,0	1/1:0,6:6:15.03:160,15,0	0/0:11,0:7:18.03:0,18,215	0/0:8,0:9:4.76:0,5,165	1/1:1,7:8:18.04:192,18,0	1/1:0,13:11:24.06:255,24,0	1/1:0,16:16:45.11:473,45,0	1/1:4,12:16:29.85:318,30,0	1/1:0,8:8:21.05:223,21,0	1/1:0,6:6:18.03:185,18,0	1/1:1,4:5:5.99:63,6,0	0/0:4,0:5:8.52:0,9,101	0/0:7,0:7:15.04:0,15,211	0/0:7,0:7:9.03:0,9,138	1/1:1,8:10:20.79:204,21,0	0/1:1,2:4:3.06:26,0,3	0/0:12,0:12:30.10:0,30,461	1/1:7,12:17:30.05:319,30,0	1/1:1,11:12:33.04:338,33,0	1/1:1,3:4:5.99:63,6,0	1/1:1,28:29:72.18:764,72,0	0/0:5,0:5:9.03:0,9,138	0/0:6,0:6:15.05:0,15,204	0/0:11,0:12:32.08:0,32,433	1/1:0,5:5:12.03:128,12,0	1/1:2,9:11:27.06:285,27,0	1/1:2,11:13:27.06:287,27,0	1/1:1,2:3:3:32,3,0
chr10	43579422	.	TA	T	4397.83	PASS	AB=0.989;AC=36;AF=0.643;AN=56;BaseQRankSum=1.068;DP=553;FS=5.010;HRun=3;HaplotypeScore=80.1253;InbreedingCoeff=0.8298;MQ=71.99;MQ0=4;MQRankSum=0.925;QD=10.30;ReadPosRankSum=-0.729;VQSLOD=2.2631;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:41,2:44:75.78:554,76,0	1/1:7,0:7:11.25:76,11,0	0/1:42,1:18:4.53:5,0,108	0/1:26,0:10:13.22:13,0,40	1/1:24,3:27:18.62:290,19,0	1/1:19,1:20:9.85:208,10,0	1/1:14,0:15:21.62:154,22,0	1/1:29,0:30:54.48:348,54,0	1/1:19,1:20:37.40:294,37,0	1/1:29,1:30:58.65:431,59,0	1/1:16,0:16:34.21:224,34,0	0/0:13,0:13:26.48:0,26,341	0/0:15,0:15:39.68:0,40,389	0/0:9,0:9:21:0,21,213	0/0:19,0:19:37.90:0,38,309	0/0:7,0:7:6.45:0,6,48	0/0:27,0:27:18.19:0,18,537	1/1:12,1:13:24.66:171,25,0	1/1:23,1:25:40.09:263,40,0	1/1:14,0:15:25.31:158,25,0	1/1:7,0:7:10.99:50,11,0	0/0:14,0:14:19.03:0,19,298	0/0:9,0:9:16.57:0,17,170	0/0:13,0:12:33:0,33,325	1/1:16,2:18:32.11:208,32,0	1/1:19,1:22:44:287,44,0	1/1:24,0:22:42.76:307,43,0	1/1:22,2:24:32.59:357,33,0
chr10	43581330	.	CATAAAA	C	14677.85	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=12.761;DP=556;FS=6.903;HRun=0;HaplotypeScore=128.3602;InbreedingCoeff=0.9790;MQ=58.19;MQ0=0;MQRankSum=-13.988;QD=39.56;ReadPosRankSum=-2.148;VQSLOD=3.4783;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,16:25:33.11:636,33,0	1/1:2,10:12:30.06:608,30,0	0/0:12,0:12:12.01:0,12,304	0/0:17,0:16:8.67:0,9,714	1/1:3,19:22:48.04:910,48,0	1/1:4,20:24:45.15:980,45,0	1/1:4,14:18:33.07:673,33,0	1/1:7,23:30:66.10:1281,66,0	1/1:7,12:19:30.10:653,30,0	1/1:6,17:23:48.16:1045,48,0	1/1:2,21:23:48.12:1001,48,0	0/0:18,0:18:45.15:0,45,1468	0/0:11,0:11:30.10:0,30,1017	0/0:9,0:9:24.08:0,24,808	0/0:26,0:26:54.19:0,54,1810	0/0:16,0:16:39.13:0,39,1318	0/0:29,0:29:78.27:0,78,2538	1/1:3,12:15:27.09:588,27,0	1/1:6,11:17:33.11:700,33,0	1/1:9,21:30:57.15:1168,57,0	1/1:6,7:13:11.95:171,12,0	0/0:13,0:13:36.12:0,36,1198	0/0:21,0:21:48.16:0,48,1622	0/0:13,0:13:33.10:0,33,1041	1/1:5,20:24:48.16:990,48,0	1/1:5,28:33:84.29:1780,84,0	1/1:7,24:31:57.15:1168,57,0	1/1:1,10:11:15.05:327,15,0
chr10	43582257	.	CCTCCGAGGCGG	C	3043.98	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=7.737;DP=386;FS=32.632;HRun=0;HaplotypeScore=133.9212;InbreedingCoeff=0.9293;MQ=87.46;MQ0=0;MQRankSum=-8.430;QD=51.59;ReadPosRankSum=1.350;VQSLOD=1.7821;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,9:17:30.10:917,30,0	1/1:2,7:9:24.08:789,24,0	0/0:20,0:19:36.12:0,36,1469	0/0:14,0:14:15:0,15,550	0/0:19,0:19:36.12:0,36,1844	1/1:5,8:13:21.07:690,21,0	1/1:9,4:13:18.06:541,18,0	0/0:12,0:12:18.05:0,18,705	1/1:5,1:6:9.03:276,9,0	0/0:14,0:14:18.03:0,18,780	0/0:11,0:11:24.03:0,24,899	0/0:9,0:9:18.06:0,18,968	0/0:7,0:7:12.04:0,12,606	0/0:11,0:11:27.08:0,27,1319	0/0:6,0:6:6.02:0,6,182	0/0:12,0:12:19.31:0,19,630	0/0:23,0:23:54.19:0,54,2838	0/0:22,0:22:48.16:0,48,2250	0/0:21,0:21:45.15:0,45,1960	0/0:13,0:13:27.08:0,27,1342	0/0:15,0:15:30.10:0,30,1547	0/0:11,0:11:15.05:0,15,812	0/0:12,0:12:27.09:0,27,1414	0/0:12,0:12:21.07:0,21,1139	0/0:16,0:16:39.11:0,39,1997	0/0:26,0:26:63.22:0,63,3164	0/0:17,0:17:42.14:0,42,2189	0/0:4,0:4:12.04:0,12,651
chr10	43582298	.	CAA	C	4546.22	PASS	AB=0.850;AC=31;AF=0.554;AN=56;BaseQRankSum=1.926;DP=423;FS=2.151;HRun=13;HaplotypeScore=84.9001;InbreedingCoeff=0.7077;MQ=54.56;MQ0=11;MQRankSum=-2.458;QD=16.59;ReadPosRankSum=-0.097;VQSLOD=4.1211;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:16,14:30:46.44:539,46,0	1/1:6,10:17:32.97:315,33,0	0/0:27,0:7:5.91:0,6,45	0/0:17,0:3:5.97:0,6,45	0/1:23,1:23:95.56:170,0,96	1/1:7,11:19:41.99:437,42,0	1/1:7,3:10:14.91:137,15,0	1/1:9,5:13:26.58:242,27,0	1/1:7,2:9:8.83:101,9,0	1/1:8,5:12:30:274,30,0	1/1:9,4:13:38.60:327,39,0	0/0:6,0:6:8.52:0,9,90	0/0:7,0:8:18.01:0,18,202	0/0:4,0:4:12:0,12,148	0/0:6,0:6:3.46:0,3,24	0/0:12,0:10:23.04:0,23,214	0/0:29,0:30:71.25:0,71,891	1/1:7,7:13:26.16:211,26,0	0/1:10,6:15:8.15:195,0,8	0/1:13,2:14:12.02:188,0,12	1/1:5,1:6:8.96:81,9,0	0/0:8,0:9:23.09:0,23,265	0/0:11,0:11:24.03:0,24,321	0/0:18,0:19:35.82:0,36,401	1/1:9,8:17:41.34:374,41,0	1/1:8,11:18:53.10:491,53,0	1/1:10,8:19:19.83:211,20,0	1/1:10,4:14:27.01:252,27,0
chr10	43582310	.	AAC	A	1215.02	PASS	AB=0.990;AC=20;AF=0.357;AN=56;BaseQRankSum=5.658;DP=443;FS=9.378;HRun=0;HaplotypeScore=99.6598;InbreedingCoeff=-0.0221;MQ=50.08;MQ0=14;MQRankSum=-3.235;QD=4.23;ReadPosRankSum=4.502;VQSLOD=1.6150;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:34,1:33:78.05:181,0,78	0/1:18,0:18:34.13:101,0,34	0/0:24,0:5:6.72:0,7,38	0/0:18,0:3:2.51:0,3,16	0/1:30,1:30:74.29:74,0,116	1/1:20,0:20:8.11:134,8,0	0/1:7,0:7:6.26:32,0,6	1/1:14,0:12:1.98:59,2,0	0/1:10,0:10:6.14:59,0,6	0/1:15,0:14:38.06:38,0,38	1/1:13,1:14:23.72:163,24,0	0/0:5,0:5:4.50:0,5,62	0/0:9,0:8:17.83:0,18,178	0/0:8,0:8:21.16:0,21,188	0/0:5,0:5:10.04:0,10,72	0/0:15,0:13:15.26:0,15,243	0/0:28,0:28:72.84:0,73,862	0/1:15,0:14:37.87:55,0,38	0/1:19,0:17:42.97:43,0,72	0/1:17,0:15:33.63:55,0,34	0/0:7,0:7:1.47:0,1,81	0/0:10,0:10:22.02:0,22,246	0/0:9,0:9:20.92:0,21,267	0/0:18,0:18:31.78:0,32,401	1/1:14,0:14:22.88:96,23,0	0/1:26,0:25:31:147,0,31	0/1:17,0:17:46.35:46,0,77	0/1:14,1:14:16.62:102,0,17
chr10	43582324	.	AAC	A	370.38	PASS	AB=1.000;AC=6;AF=0.107;AN=56;BaseQRankSum=2.197;DP=470;FS=0.506;HRun=0;HaplotypeScore=109.1963;InbreedingCoeff=0.2339;MQ=61.01;MQ0=10;MQRankSum=-1.216;QD=3.90;ReadPosRankSum=-2.550;VQSLOD=2.2174;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:34:45.16:0,45,337	0/0:18,0:18:29.55:0,30,138	0/1:25,0:10:36.14:36,0,37	0/1:19,0:9:9.39:22,0,9	1/1:23,4:26:51.87:402,52,0	0/0:20,0:20:44.52:0,45,274	0/0:8,0:8:7.75:0,8,48	0/0:16,0:14:13.58:0,14,141	0/0:9,0:9:11.64:0,12,77	0/0:19,0:18:32.39:0,32,154	0/0:17,0:17:0.90:0,1,123	0/0:4,0:4:6.02:0,6,74	0/0:10,0:9:20.36:0,20,162	0/0:10,0:10:29.89:0,30,326	0/1:9,0:9:6.18:6,0,12	0/1:15,0:13:14.38:30,0,14	0/0:32,0:32:49.98:0,50,947	0/0:16,0:15:35.83:0,36,189	0/0:20,0:19:17.42:0,17,222	0/0:17,0:16:35.17:0,35,197	0/0:7,0:7:19.10:0,19,88	0/0:13,0:13:9.39:0,9,290	0/0:8,0:8:13.56:0,14,199	0/0:20,0:20:15.75:0,16,333	0/0:16,0:16:35.84:0,36,236	0/0:27,0:26:30.32:0,30,234	0/0:16,0:16:28.31:0,28,180	0/0:16,0:15:15.33:0,15,182
chr10	43582325	.	AC	A	725.31	PASS	AB=0.979;AC=17;AF=0.304;AN=56;BaseQRankSum=4.604;DP=464;FS=3.514;HRun=1;HaplotypeScore=97.4220;InbreedingCoeff=-0.0807;MQ=60.31;MQ0=9;MQRankSum=-2.677;QD=2.64;ReadPosRankSum=3.019;VQSLOD=-0.1160;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:34,0:32:32.62:33,0,97	0/1:19,0:19:14.47:42,0,14	0/1:22,2:9:23.19:23,0,26	0/1:17,2:9:2.36:33,0,2	1/1:22,4:25:64.64:570,65,0	0/0:18,0:18:10.09:0,10,118	1/1:9,0:9:0.24:16,0,0	0/1:15,0:13:7.83:8,0,75	0/1:8,1:9:5.59:50,0,6	0/1:19,0:18:9.10:9,0,18	0/1:17,0:17:37.60:38,0,60	0/0:4,0:4:5.96:0,6,51	0/0:11,0:10:17.56:0,18,123	0/0:10,0:10:28:0,28,217	0/0:9,0:9:12.67:0,13,52	0/0:14,0:12:24.84:0,25,92	0/0:32,0:32:45.96:0,46,687	0/0:16,0:15:7.28:0,7,102	0/0:20,0:20:24.23:0,24,191	0/1:17,0:16:2.04:2,0,83	0/0:7,0:7:1.08:0,1,7	0/0:13,0:13:10.37:0,10,229	0/1:9,0:9:20.85:21,0,159	0/0:20,0:20:12.01:0,12,241	0/0:15,0:15:13.60:0,14,158	0/1:25,0:24:9.99:10,0,78	0/1:17,0:17:5.70:6,0,67	0/1:16,0:15:18.71:19,0,57
chr10	43582326	.	CA	C	3507.09	PASS	AB=0.786;AC=35;AF=0.625;AN=56;BaseQRankSum=4.880;DP=462;FS=1.030;HRun=12;HaplotypeScore=86.7357;InbreedingCoeff=0.4059;MQ=61.51;MQ0=10;MQRankSum=-1.381;QD=10.05;ReadPosRankSum=1.958;VQSLOD=3.2783;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:16,17:32:25.45:331,0,25	1/1:5,13:18:32.68:255,33,0	0/0:24,0:10:3.18:0,3,71	0/0:19,0:9:3.44:0,3,27	0/1:26,0:25:16.85:80,0,17	1/1:4,14:18:2.21:192,2,0	1/1:1,7:9:16.92:115,17,0	0/1:6,8:13:6.27:122,0,6	1/1:3,6:9:20.90:161,21,0	1/1:2,16:18:49.85:377,50,0	1/1:5,11:17:30.70:219,31,0	0/0:4,0:4:5.96:0,6,49	0/0:11,0:10:15:0,15,140	0/0:10,0:10:15.03:0,15,152	1/1:3,0:9:5.89:16,6,0	1/1:4,0:12:14.23:41,14,0	0/0:31,0:32:42:0,42,639	1/1:5,9:14:20.89:162,21,0	1/1:12,7:20:22.84:168,23,0	0/1:6,11:16:0.56:179,0,1	1/1:0,7:7:20.81:154,21,0	0/0:13,0:13:26.86:0,27,232	0/1:9,0:9:2.16:2,0,155	0/1:19,1:20:16.42:16,0,206	0/1:7,7:15:7.52:122,0,8	1/1:6,18:24:55.76:420,56,0	1/1:7,9:17:1.36:173,1,0	1/1:7,9:15:19.26:199,19,0
chr10	43584645	.	A	AAAT	1807.33	PASS	AB=1.000;AC=35;AF=0.700;AN=50;BaseQRankSum=-1.866;DP=236;FS=2.184;HRun=0;HaplotypeScore=45.5823;InbreedingCoeff=0.5245;MQ=66.63;MQ0=0;MQRankSum=-1.652;QD=10.69;ReadPosRankSum=-1.968;VQSLOD=2.1237;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:16:29.76:0,30,210	1/1:2,0:2:3.11:8,3,0	./.	./.	1/1:6,0:6:3.89:35,4,0	1/1:2,7:9:21.07:407,21,0	1/1:3,2:5:3.01:58,3,0	1/1:55,0:55:44.22:462,44,0	1/1:0,2:2:6.02:116,6,0	1/1:3,0:3:3.01:39,3,0	1/1:4,0:4:3.01:46,3,0	0/0:7,0:7:3:0,3,28	0/0:4,0:4:3:0,3,29	0/0:5,0:5:5.23:0,5,58	0/0:6,0:6:5.95:0,6,42	0/0:5,0:5:8.93:0,9,63	1/1:19,0:19:9.71:165,10,0	1/1:10,0:10:10.49:113,10,0	0/1:7,0:7:0:0,0,0	1/1:7,0:7:6.02:88,6,0	1/1:5,0:5:2.76:20,3,0	1/1:5,0:5:0.47:1,0,0	./.	0/0:6,0:6:3.01:0,3,30	1/1:9,0:9:9.03:122,9,0	1/1:4,0:4:6.02:92,6,0	1/1:8,0:8:6.02:92,6,0	1/1:9,0:9:6.02:91,6,0
chr10	43584669	.	TA	T	381.16	PASS	AB=0.882;AC=2;AF=0.038;AN=52;BaseQRankSum=2.072;DP=186;FS=6.544;HRun=2;HaplotypeScore=42.8982;InbreedingCoeff=-0.0537;MQ=53.73;MQ0=1;MQRankSum=-3.800;QD=6.15;ReadPosRankSum=-3.397;VQSLOD=-0.6953;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:13.64:0,14,104	0/0:2,0:2:6.02:0,6,89	./.	0/0:6,0:2:3:0,3,26	0/0:3,0:3:9.03:0,9,133	0/0:9,0:9:27.02:0,27,262	0/0:4,0:4:9.02:0,9,107	0/1:40,18:54:99:453,0,1242	0/0:2,0:2:6:0,6,51	0/0:1,0:1:3.01:0,3,36	0/0:1,0:1:3.01:0,3,34	0/0:3,0:3:9.02:0,9,111	0/0:1,0:1:2.92:0,3,17	0/0:5,0:5:11.52:0,12,132	0/0:5,0:5:5.31:0,5,30	0/0:6,0:6:8.68:0,9,47	0/0:15,0:15:15.05:0,15,199	0/0:12,0:12:15.07:0,15,197	0/1:4,0:4:7.83:8,0,77	0/0:4,0:4:9:0,9,98	0/0:3,0:3:8.91:0,9,81	0/0:1,0:1:1.25:0,1,3	./.	0/0:1,0:1:3.01:0,3,45	0/0:7,0:7:12.04:0,12,156	0/0:3,0:3:6.02:0,6,74	0/0:5,0:5:6.02:0,6,74	0/0:9,0:9:9.03:0,9,115
chr10	43584672	.	TA	T	576.50	PASS	AB=0.878;AC=4;AF=0.074;AN=54;BaseQRankSum=1.685;DP=190;FS=5.579;HRun=2;HaplotypeScore=43.0815;InbreedingCoeff=-0.1175;MQ=54.12;MQ0=1;MQRankSum=-3.730;QD=7.49;ReadPosRankSum=-2.426;VQSLOD=-0.0113;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:13.63:0,14,88	0/0:2,0:2:6.02:0,6,89	./.	0/0:6,0:2:5.97:0,6,56	0/0:3,0:3:9.03:0,9,133	0/0:10,0:10:30.02:0,30,287	0/0:4,0:4:9.02:0,9,107	0/1:53,5:54:99:553,0,1146	0/0:2,0:2:6:0,6,51	0/0:1,0:1:3.01:0,3,36	0/0:1,0:1:3.01:0,3,34	0/0:4,0:4:11.20:0,11,89	0/0:1,0:1:2.92:0,3,17	0/0:6,0:6:14.27:0,14,108	0/0:7,0:7:5.31:0,5,30	0/0:7,0:7:8.68:0,9,47	0/0:16,0:16:15.05:0,15,198	0/1:11,1:12:92:92,0,132	0/1:2,2:4:26.28:26,0,77	0/0:3,0:3:6.02:0,6,77	0/1:3,0:3:5.38:5,0,24	0/0:1,0:1:1.25:0,1,3	0/0:1,0:1:3:0,3,27	0/0:1,0:1:3.01:0,3,45	0/0:7,0:7:12.04:0,12,156	0/0:2,0:2:6.02:0,6,74	0/0:5,0:5:6.02:0,6,74	0/0:8,0:8:6.01:0,6,66
chr10	43584676	.	A	AAT	523.90	PASS	AB=0.963;AC=31;AF=0.574;AN=54;BaseQRankSum=2.414;DP=205;FS=2.390;HRun=0;HaplotypeScore=48.7128;InbreedingCoeff=0.2784;MQ=54.33;MQ0=1;MQRankSum=1.353;QD=6.39;ReadPosRankSum=3.643;VQSLOD=2.5017;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:41.62:0,42,348	0/0:2,0:2:6.01:0,6,59	./.	0/0:6,0:2:6.02:0,6,77	0/0:5,0:5:1.02:0,1,69	0/1:10,0:10:63.83:64,0,93	0/1:4,0:4:4.40:4,0,73	0/0:58,0:54:99:0,101,919	1/1:2,0:2:5.60:26,6,0	1/1:2,0:2:5.23:47,5,0	1/1:1,0:1:2.37:8,2,0	1/1:5,0:5:10.01:36,10,0	1/1:1,0:1:2.50:9,2,0	1/1:6,0:6:11.94:69,12,0	0/0:7,0:7:4.77:0,5,17	0/0:9,0:9:7.49:0,7,26	0/0:17,0:17:1.91:0,2,16	0/1:10,3:13:31.55:154,0,32	0/1:7,0:7:10.33:83,0,10	1/1:4,0:4:3.47:10,3,0	1/1:1,2:3:5.91:73,6,0	1/1:1,0:1:3.01:40,3,0	0/0:1,0:1:2.37:0,2,8	1/1:1,0:1:2.37:8,2,0	0/1:7,0:7:10.09:10,0,14	1/1:2,0:2:4.44:15,4,0	1/1:5,0:5:4.44:15,4,0	1/1:8,0:8:4.26:13,4,0
chr10	43584678	.	TAATATA	T	337.63	PASS	AB=1.000;AC=10;AF=0.185;AN=54;BaseQRankSum=-1.603;DP=205;FS=1.194;HRun=0;HaplotypeScore=61.6855;InbreedingCoeff=0.3695;MQ=54.21;MQ0=1;MQRankSum=1.557;QD=10.55;ReadPosRankSum=-0.526;VQSLOD=1.6160;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:17.95:0,18,428	0/0:3,0:3:8.91:0,9,87	./.	0/1:6,0:2:5.99:6,0,39	0/0:5,0:5:14.76:0,15,140	0/0:10,0:10:30.10:0,30,788	0/0:4,0:4:9.03:0,9,178	0/0:55,0:51:84.50:0,84,1367	0/0:2,0:2:6.02:0,6,181	0/0:2,0:2:6.02:0,6,113	0/0:1,0:1:3.01:0,3,57	0/0:6,0:6:18.02:0,18,196	1/1:1,0:1:3:25,3,0	0/1:8,0:8:31.49:31,0,192	1/1:0,7:7:5.68:147,6,0	1/1:0,9:9:9.03:221,9,0	0/0:17,0:17:15.05:0,15,325	0/0:13,0:13:20.56:0,21,205	0/0:6,0:6:4.87:0,5,26	0/0:4,0:4:6.02:0,6,141	0/0:3,0:3:5.75:0,6,59	1/1:1,0:1:3.01:40,3,0	0/0:1,0:1:3.01:0,3,33	0/0:1,0:1:3.01:0,3,53	0/0:7,0:7:12.02:0,12,225	0/0:2,0:2:6.02:0,6,156	0/0:5,0:5:6.02:0,6,155	0/0:8,0:8:6.02:0,6,144
chr10	43584679	.	AAT	A	1812.80	PASS	AB=0.845;AC=21;AF=0.389;AN=54;BaseQRankSum=-1.802;DP=208;FS=0.656;HRun=0;HaplotypeScore=43.7573;InbreedingCoeff=0.3596;MQ=54.14;MQ0=1;MQRankSum=0.099;QD=13.33;ReadPosRankSum=-2.855;VQSLOD=2.3052;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:7.88:0,8,178	0/1:1,2:3:29.80:45,0,30	./.	0/0:6,0:2:6.01:0,6,65	1/1:5,0:5:10.86:64,11,0	0/0:10,0:10:30.09:0,30,350	0/0:4,0:4:9.03:0,9,111	0/1:38,18:52:99:1202,0,471	0/0:2,0:2:6.02:0,6,67	0/1:2,0:2:8.61:9,0,11	0/0:1,0:1:2.50:0,2,9	1/1:6,0:6:7.21:37,7,0	0/0:2,0:2:1.82:0,2,5	1/1:8,0:8:8.09:51,8,0	1/1:7,0:7:5.68:28,6,0	1/1:9,0:9:8.52:41,9,0	0/1:17,0:17:0.80:1,0,59	0/1:11,2:13:7.31:266,0,7	1/1:1,5:6:16.29:200,16,0	0/0:5,0:5:5.90:0,6,37	1/1:3,0:3:4.81:28,5,0	1/1:1,0:1:0.47:1,0,0	0/0:1,0:1:1.55:0,2,4	0/0:1,0:1:1.55:0,2,4	0/0:7,0:7:8.61:0,9,47	0/0:2,0:2:5.88:0,6,36	0/0:5,0:5:5.88:0,6,36	0/0:8,0:8:5.88:0,6,36
chr10	43584681	.	T	TTAATATAATA	2523.19	PASS	AB=0.720;AC=23;AF=0.426;AN=54;BaseQRankSum=0.404;DP=217;FS=3.122;HRun=0;HaplotypeScore=72.5843;InbreedingCoeff=0.3789;MQ=54.50;MQ0=1;MQRankSum=-3.638;QD=17.16;ReadPosRankSum=-1.096;VQSLOD=1.3479;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:45.15:0,45,1126	0/0:3,0:3:8.68:0,9,66	./.	0/0:5,0:2:6.02:0,6,130	0/1:2,0:4:6.74:7,0,17	0/0:11,0:11:33.10:0,33,615	0/0:4,0:4:9.03:0,9,242	0/1:32,0:53:99:281,0,194	0/0:2,0:2:6.02:0,6,93	1/1:0,0:3:5.52:170,6,0	1/1:0,1:3:3.01:126,3,0	0/0:6,0:6:5.41:0,5,95	0/0:2,0:2:3:0,3,26	0/1:8,0:8:0.34:0,0,139	0/0:7,0:7:6.02:0,6,140	0/0:9,0:9:9.03:0,9,210	0/1:1,0:17:42.16:65,0,42	0/1:8,0:13:28.46:321,0,28	1/1:6,0:6:15.05:269,15,0	1/1:0,0:6:9.03:255,9,0	1/1:3,0:5:9.03:153,9,0	0/0:1,0:1:2.37:0,2,8	0/0:1,0:1:2.98:0,3,22	0/0:1,0:1:3.01:0,3,51	1/1:0,0:8:9.03:358,9,0	1/1:0,0:3:9.03:254,9,0	1/1:0,0:5:6.02:219,6,0	1/1:0,0:9:6.02:217,6,0
chr10	43584882	.	G	GAGAA	830.87	PASS	AB=1.000;AC=18;AF=0.409;AN=44;BaseQRankSum=-1.889;DP=388;FS=4.087;HRun=0;HaplotypeScore=99.1826;InbreedingCoeff=0.3844;MQ=65.45;MQ0=5;MQRankSum=0.482;QD=5.04;ReadPosRankSum=4.054;VQSLOD=1.7430;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:13,18:33:24.08:553,24,0	./.	./.	./.	./.	0/0:15,0:15:18.04:0,18,250	0/1:14,0:14:5.56:6,0,19	./.	0/0:6,0:11:5.88:0,6,43	0/1:8,0:7:0.61:1,0,41	./.	0/1:13,0:13:14.82:18,0,15	0/1:12,0:12:12.94:77,0,13	1/1:14,0:14:10.67:55,11,0	1/1:21,0:21:11.81:76,12,0	1/1:14,0:14:10.63:66,11,0	0/0:18,0:16:11.58:0,12,82	0/0:21,0:21:14.01:0,14,101	0/0:15,0:15:2.46:0,2,41	0/0:7,0:7:2.87:0,3,15	0/0:5,0:5:3.82:0,4,43	1/1:6,0:6:5.98:56,6,0	0/0:4,0:4:2.74:0,3,12	1/1:24,0:25:5.17:60,5,0	1/1:4,0:4:2.60:10,3,0	0/0:21,0:21:1.83:0,2,135	0/0:20,0:18:4.43:0,4,174	0/0:14,0:13:8.98:0,9,76
chr10	43584920	.	GAA	G	185.69	PASS	AB=0.877;AC=4;AF=0.080;AN=50;BaseQRankSum=4.493;DP=367;FS=0.880;HRun=3;HaplotypeScore=120.3931;InbreedingCoeff=-0.1099;MQ=44.11;MQ0=9;MQRankSum=-5.150;QD=2.51;ReadPosRankSum=0.336;VQSLOD=-0.4974;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,99,1391	./.	./.	./.	0/0:6,0:6:6.02:0,6,86	0/0:20,0:20:60.15:0,60,962	0/0:9,0:9:21.03:0,21,307	0/0:16,0:15:42.10:0,42,557	0/0:11,0:11:13.28:0,13,276	0/0:10,0:9:20.27:0,20,221	0/0:3,0:2:5.96:0,6,46	0/1:15,1:16:3.63:4,0,274	0/1:12,1:13:9.06:9,0,304	0/0:16,1:17:8.94:0,9,429	0/0:15,0:15:31.91:0,32,296	0/0:21,0:20:38.54:0,39,516	0/1:12,8:18:83.52:243,0,84	0/0:18,0:18:26.85:0,27,432	0/0:10,0:6:13.62:0,14,211	0/0:7,0:7:19.57:0,20,237	0/0:6,0:6:12.98:0,13,73	0/0:3,0:3:1.73:0,2,46	0/0:5,0:5:5.38:0,5,39	0/1:23,2:24:25.94:26,0,472	0/0:4,0:4:12.03:0,12,139	0/0:22,0:21:62.88:0,63,803	0/0:25,0:23:67.39:0,67,767	0/0:11,0:10:24.07:0,24,306
chr10	43584928	.	GAA	G	4681.56	PASS	AB=0.751;AC=24;AF=0.462;AN=52;BaseQRankSum=5.203;DP=402;FS=21.383;HRun=3;HaplotypeScore=109.3804;InbreedingCoeff=-0.0820;MQ=43.16;MQ0=11;MQRankSum=-5.272;QD=18.01;ReadPosRankSum=4.061;VQSLOD=1.2938;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,102,1434	./.	./.	0/0:14,0:1:3.01:0,3,43	0/0:9,0:9:12.03:0,12,151	0/0:22,0:22:66.18:0,66,1072	0/0:10,0:10:24.04:0,24,334	0/0:21,0:21:55.68:0,56,583	0/0:12,0:12:12.56:0,13,286	1/1:4,5:8:17.98:273,18,0	1/1:1,3:3:9.01:101,9,0	0/1:10,7:17:43.09:245,0,43	0/1:8,6:14:7.78:234,0,8	0/1:9,8:17:12.59:257,0,13	0/1:13,4:17:99:144,0,225	0/1:19,4:22:99:145,0,463	0/1:18,2:18:15.41:15,0,174	0/1:14,3:17:17.28:390,0,17	0/1:9,3:8:46.51:232,0,47	0/1:3,4:7:24.80:208,0,25	1/1:4,2:6:13.78:127,14,0	0/1:1,3:4:21.04:86,0,21	0/1:4,2:6:8.36:9,0,8	0/1:26,1:26:91.04:91,0,227	1/1:2,2:4:9.03:132,9,0	0/1:7,14:20:5.61:729,0,6	1/1:8,16:24:66.19:970,66,0	0/1:6,5:10:18.78:294,0,19
chr10	43584930	.	A	AAG	2083.21	PASS	AB=0.954;AC=26;AF=0.481;AN=54;BaseQRankSum=6.510;DP=411;FS=21.230;HRun=0;HaplotypeScore=121.3896;InbreedingCoeff=-0.1530;MQ=43.06;MQ0=11;MQRankSum=-3.311;QD=7.52;ReadPosRankSum=2.924;VQSLOD=1.8914;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:6.93:0,7,930	./.	0/0:9,0:1:0:0,0,0	0/0:18,0:2:3.01:0,3,43	0/0:9,0:9:11.96:0,12,129	0/0:23,0:23:66.18:0,66,906	0/0:9,0:9:21.06:0,21,284	0/1:21,0:21:38.43:38,0,280	0/1:13,0:13:34.92:35,0,299	1/1:11,0:10:4.38:129,4,0	1/1:4,0:3:9.01:101,9,0	0/1:15,2:17:23.72:72,0,24	0/1:11,3:14:14.01:107,0,14	0/1:14,2:16:37.24:109,0,37	0/1:18,0:18:29.45:29,0,228	0/0:20,0:19:33.59:0,34,512	0/1:21,1:20:31.26:31,0,127	1/1:18,0:18:3.80:241,4,0	0/1:12,0:8:42.32:139,0,42	0/1:7,0:7:28.51:128,0,29	1/1:6,0:6:2.75:45,3,0	0/1:4,0:4:12.97:34,0,13	0/1:5,1:6:10.22:22,0,10	0/1:26,2:27:99:200,0,120	1/1:3,0:3:7.27:90,7,0	0/1:22,0:21:2.96:140,0,3	1/1:24,0:22:32.68:387,33,0	0/1:11,0:10:28.68:165,0,29
chr10	43584942	.	GAA	G	6025.92	PASS	AB=0.777;AC=33;AF=0.589;AN=56;BaseQRankSum=9.228;DP=437;FS=12.126;HRun=3;HaplotypeScore=107.4456;InbreedingCoeff=0.4208;MQ=47.15;MQ0=8;MQRankSum=-5.069;QD=21.37;ReadPosRankSum=1.650;VQSLOD=1.9577;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,99,1857	0/0:3,0:3:9.02:0,9,142	0/0:18,0:6:11.32:0,11,142	0/0:33,0:5:7.74:0,8,170	0/0:11,0:11:21.03:0,21,360	0/0:21,0:21:63.22:0,63,1187	0/0:11,0:11:24.08:0,24,449	0/1:28,1:29:99:201,0,519	0/0:14,0:14:14.03:0,14,517	1/1:3,7:10:24:365,24,0	1/1:0,3:3:9.03:124,9,0	1/1:10,8:18:9.58:235,10,0	1/1:3,9:12:28.70:235,29,0	1/1:6,11:17:9.51:249,10,0	1/1:4,10:14:24.02:376,24,0	1/1:4,17:20:41.69:569,42,0	0/1:16,5:21:66.51:77,0,67	1/1:13,5:18:17.19:542,17,0	0/1:4,5:9:69.81:283,0,70	0/1:4,2:6:35.92:181,0,36	1/1:2,4:6:12.03:180,12,0	1/1:3,4:7:14.29:160,14,0	0/1:6,3:9:28.47:34,0,28	0/1:21,2:22:69.65:157,0,70	1/1:2,2:4:12.03:152,12,0	1/1:8,12:19:37.75:622,38,0	1/1:7,16:23:63.16:905,63,0	0/1:4,8:12:26.92:380,0,27
chr10	43584948	.	AAG	A	529.10	PASS	AB=0.807;AC=9;AF=0.161;AN=56;BaseQRankSum=7.197;DP=463;FS=10.503;HRun=0;HaplotypeScore=126.4386;InbreedingCoeff=-0.0176;MQ=49.80;MQ0=13;MQRankSum=-3.919;QD=3.89;ReadPosRankSum=2.627;VQSLOD=2.1882;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,105,1835	0/0:4,0:4:12.04:0,12,205	0/0:25,0:9:15.58:0,16,200	0/0:43,0:6:14.64:0,15,222	0/0:12,0:12:21.07:0,21,364	0/0:26,0:26:75.26:0,75,1273	0/0:11,0:11:27.09:0,27,463	0/0:32,0:31:77.80:0,78,872	0/0:14,0:14:33.07:0,33,550	0/0:9,0:9:20.45:0,20,166	0/0:3,0:3:8.18:0,8,38	0/1:9,6:17:0.61:88,0,1	0/1:2,9:13:16.91:134,0,17	0/1:6,8:16:21.61:105,0,22	0/0:13,0:13:23.39:0,23,213	0/0:20,0:19:37.63:0,38,210	0/1:18,3:23:38.55:39,0,55	0/1:21,0:21:49.87:50,0,259	0/0:8,0:8:20.66:0,21,210	0/0:6,0:6:17.27:0,17,165	0/1:8,0:8:53.82:56,0,54	0/1:2,3:7:2.33:80,0,2	0/1:6,3:10:21.90:22,0,70	0/1:15,2:21:85.70:96,0,86	0/0:4,0:4:11.51:0,12,115	0/0:17,0:16:22.06:0,22,327	0/0:23,0:21:56.10:0,56,371	0/0:13,0:13:34.97:0,35,330
chr10	43584950	.	G	GAA	1052.08	PASS	AB=0.945;AC=9;AF=0.161;AN=56;BaseQRankSum=4.949;DP=466;FS=0.000;HRun=3;HaplotypeScore=124.4572;InbreedingCoeff=0.2377;MQ=49.95;MQ0=14;MQRankSum=-3.486;QD=9.83;ReadPosRankSum=4.528;VQSLOD=0.3348;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,105,1500	0/0:4,0:4:12.04:0,12,182	0/0:25,0:9:15.55:0,16,187	0/0:45,0:6:15.04:0,15,209	0/0:12,0:12:21.07:0,21,321	0/0:25,0:25:75.25:0,75,1131	0/0:11,0:11:27.09:0,27,405	0/0:32,0:31:79.96:0,80,905	0/0:14,0:14:33.07:0,33,478	0/0:10,0:10:23.86:0,24,269	0/0:4,0:4:11.96:0,12,99	0/1:15,0:15:13.04:235,0,13	1/1:13,1:14:7.50:209,7,0	1/1:14,2:16:3.64:313,4,0	0/0:12,0:12:24.08:0,24,364	0/0:21,0:20:47.69:0,48,597	0/1:23,0:23:54.33:131,0,54	0/0:21,0:21:42.03:0,42,463	0/0:8,0:8:21.06:0,21,271	0/0:6,0:6:17.87:0,18,184	0/0:8,0:8:16.76:0,17,106	0/1:8,0:8:28.44:50,0,28	0/1:10,0:10:55.58:56,0,63	0/1:13,7:21:68.33:198,0,68	0/0:4,0:4:11.93:0,12,130	0/0:18,0:17:33.34:0,33,535	0/0:24,0:22:62.64:0,63,656	0/0:13,0:13:36.04:0,36,451
chr10	43584956	.	AAGAGAGGG	A	3913.68	PASS	AB=0.938;AC=17;AF=0.304;AN=56;BaseQRankSum=3.781;DP=474;FS=12.273;HRun=0;HaplotypeScore=150.8942;InbreedingCoeff=-0.4405;MQ=50.24;MQ0=14;MQRankSum=-3.419;QD=15.59;ReadPosRankSum=5.710;VQSLOD=1.6737;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,99,3208	0/0:4,0:4:12.04:0,12,460	0/0:28,0:11:17.67:0,18,211	0/0:51,0:8:18.41:0,18,325	0/0:11,0:11:21.07:0,21,816	0/0:26,0:26:75.26:0,75,2264	0/0:12,0:12:30.10:0,30,867	0/1:15,20:34:99:1089,0,174	0/0:13,0:13:30.10:0,30,1166	0/1:10,0:10:99:164,0,234	0/1:4,0:4:99:128,0,122	0/1:12,0:16:99:170,0,343	0/1:15,0:15:99:168,0,298	0/1:16,0:16:99:238,0,276	0/0:10,0:10:19.34:0,19,453	0/0:18,0:17:33.37:0,33,393	0/1:15,0:24:99:151,0,475	0/1:20,0:20:99:302,0,448	0/1:8,0:8:99:178,0,188	0/1:6,0:6:97.52:98,0,145	0/1:9,0:9:60.35:60,0,247	0/0:9,0:9:18.83:0,19,319	0/1:8,0:11:41.28:41,0,315	0/1:20,0:20:94.71:162,0,95	0/1:5,0:5:90.43:90,0,184	0/1:16,0:15:99:362,0,389	0/1:24,0:23:99:286,0,591	0/1:12,0:12:99:226,0,337
chr10	43585393	.	A	AT	765.76	PASS	AB=0.838;AC=4;AF=0.074;AN=54;BaseQRankSum=3.599;DP=265;FS=0.762;HRun=2;HaplotypeScore=32.6750;InbreedingCoeff=-0.0972;MQ=65.24;MQ0=1;MQRankSum=-1.440;QD=10.49;ReadPosRankSum=-3.168;VQSLOD=0.4066;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:42.14:0,42,545	0/0:1,0:1:3.01:0,3,39	0/1:7,0:5:9.34:9,0,94	0/1:10,0:8:11.89:12,0,181	0/1:1,0:2:1.91:2,0,34	0/0:14,0:14:42.14:0,42,545	0/0:4,0:4:12.04:0,12,156	0/1:29,25:52:99:835,0,688	0/0:6,0:6:18.06:0,18,234	0/0:10,0:10:27.09:0,27,350	0/0:10,0:10:30.10:0,30,389	0/0:8,0:8:24.08:0,24,311	0/0:7,0:7:21.07:0,21,271	0/0:9,0:9:27.09:0,27,347	0/0:5,0:5:12.04:0,12,156	0/0:1,0:1:3.01:0,3,38	0/0:21,0:21:57.18:0,57,738	0/0:13,0:13:30.08:0,30,372	0/0:22,0:21:60.17:0,60,762	0/0:5,0:5:15.04:0,15,180	0/0:5,0:5:15.05:0,15,195	./.	0/0:4,0:4:12.04:0,12,155	0/0:2,0:2:3.01:0,3,39	0/0:7,0:7:18.06:0,18,234	0/0:8,0:8:24.08:0,24,311	0/0:7,0:7:12.04:0,12,155	0/0:9,0:9:24.08:0,24,306
chr10	43586419	.	CAT	C	3731.98	PASS	AC=42;AF=0.840;AN=50;BaseQRankSum=0.498;DP=356;FS=0.860;HRun=0;HaplotypeScore=78.1153;InbreedingCoeff=0.7725;MQ=31.62;MQ0=32;MQRankSum=0.245;QD=13.47;ReadPosRankSum=1.130;VQSLOD=3.5234;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:21:0,21,295	1/1:0,4:4:8.90:60,9,0	./.	./.	1/1:11,0:11:17.74:113,18,0	0/0:20,0:20:6.45:0,6,155	0/0:16,0:15:32.94:0,33,440	1/1:20,0:17:35.94:297,36,0	0/0:8,0:8:3.01:0,3,49	1/1:6,11:16:29.96:349,30,0	1/1:7,15:21:23.88:224,24,0	1/1:13,0:13:14.43:80,14,0	1/1:14,0:14:25.90:140,26,0	1/1:10,0:10:20.27:114,20,0	1/1:3,0:12:14.33:76,14,0	1/1:2,0:12:23.07:127,23,0	1/1:10,4:12:6.02:74,6,0	1/1:2,10:8:9.03:111,9,0	1/1:3,16:18:44.98:458,45,0	1/1:3,15:17:32.68:345,33,0	1/1:5,6:6:5.64:39,6,0	1/1:13,0:14:23.58:148,24,0	1/1:7,0:5:8.87:58,9,0	./.	1/1:1,14:14:26.72:262,27,0	1/1:0,11:11:30.08:360,30,0	1/1:2,9:11:17.95:223,18,0	1/1:0,8:7:6.02:74,6,0
chr10	43586429	.	TATATA	T	2055.28	PASS	AB=1.000;AC=16;AF=0.308;AN=52;BaseQRankSum=-1.078;DP=360;FS=0.618;HRun=0;HaplotypeScore=102.8000;InbreedingCoeff=0.7863;MQ=32.72;MQ0=37;MQRankSum=-3.653;QD=22.84;ReadPosRankSum=-3.606;VQSLOD=2.7781;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:22.79:0,23,647	0/0:5,0:5:9.03:0,9,135	./.	./.	0/1:14,0:14:27.50:85,0,27	0/0:22,0:22:17.24:0,17,419	0/0:16,0:14:32.16:0,32,952	0/0:24,0:18:22.94:0,23,201	0/0:4,0:4:3.01:0,3,94	0/0:18,0:17:39.05:0,39,439	0/0:19,0:18:26.89:0,27,299	1/1:0,9:9:15.05:326,15,0	1/1:0,11:11:27.09:596,27,0	1/1:0,7:7:21.07:451,21,0	1/1:11,0:11:11.88:45,12,0	1/1:13,0:12:21.61:101,22,0	0/0:14,0:11:14.95:0,15,128	0/0:18,0:14:21.04:0,21,255	0/0:16,0:16:47.97:0,48,510	0/0:17,0:16:35.75:0,36,368	0/0:10,0:6:7.71:0,8,82	1/1:2,10:12:25.33:464,25,0	1/1:1,8:8:9.03:171,9,0	0/1:3,0:2:0:0,0,0	0/0:17,0:16:26.31:0,26,307	0/0:15,0:15:42.07:0,42,431	0/0:14,0:14:27.07:0,27,349	0/0:9,0:7:6.01:0,6,61
chr10	43586431	.	TA	T	486.33	PASS	AC=16;AF=0.320;AN=50;BaseQRankSum=4.319;DP=359;FS=0.675;HRun=1;HaplotypeScore=96.6140;InbreedingCoeff=0.8603;MQ=32.70;MQ0=39;MQRankSum=-3.953;QD=5.53;ReadPosRankSum=-1.346;VQSLOD=-0.1058;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:24.08:0,24,369	0/0:5,0:5:8.56:0,9,43	./.	./.	1/1:7,7:14:21.04:122,21,0	0/0:21,0:21:11.55:0,12,222	0/0:16,0:14:32.99:0,33,518	0/0:23,0:17:44.15:0,44,233	0/0:3,0:3:3.01:0,3,48	0/0:15,0:14:16.98:0,17,112	0/0:20,0:19:18.25:0,18,101	1/1:9,0:9:12.56:59,13,0	1/1:11,0:11:22.16:97,22,0	1/1:7,0:7:18.21:90,18,0	1/1:12,0:12:8.87:33,9,0	1/1:13,0:12:16.32:73,16,0	0/0:14,0:11:7.79:0,8,78	0/0:18,0:15:17.55:0,18,157	0/0:16,0:16:30.37:0,30,154	0/0:17,0:16:19.72:0,20,96	0/0:10,0:6:8.30:0,8,67	1/1:12,0:12:23.42:143,23,0	1/1:9,0:8:8.84:55,9,0	./.	0/0:17,0:16:15.63:0,16,64	0/0:15,0:15:22.81:0,23,176	0/0:13,0:13:14.34:0,14,124	0/0:9,0:7:1.77:0,2,4
chr10	43586432	.	ATAT	A	1637.70	PASS	AB=1.000;AC=29;AF=0.558;AN=52;BaseQRankSum=-1.634;DP=358;FS=6.703;HRun=0;HaplotypeScore=98.5418;InbreedingCoeff=0.3562;MQ=32.65;MQ0=39;MQRankSum=-2.030;QD=7.00;ReadPosRankSum=5.778;VQSLOD=1.3027;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:24.48:0,24,426	1/1:5,0:5:2.96:20,3,0	./.	./.	0/1:13,0:13:0.58:59,0,1	0/0:21,0:21:17.80:0,18,262	0/0:16,0:14:34.19:0,34,580	1/1:3,19:17:48.11:681,48,0	0/0:3,0:3:3.01:0,3,68	0/1:15,0:14:3.11:3,0,52	0/1:20,0:19:19.15:48,0,19	1/1:9,0:9:14.08:73,14,0	1/1:11,0:11:25.22:130,25,0	1/1:7,0:7:19.81:105,20,0	1/1:12,0:12:14.33:77,14,0	1/1:13,0:12:20.70:111,21,0	0/0:13,0:10:7.64:0,8,107	0/0:18,0:15:10.82:0,11,139	1/1:16,0:16:29:159,29,0	1/1:16,1:16:15.41:91,15,0	0/1:10,0:6:25.68:30,0,26	1/1:13,0:12:11.30:131,11,0	0/1:9,0:8:7.25:46,0,7	0/0:3,0:2:0:0,0,0	0/1:18,0:17:16.20:16,0,25	0/1:15,0:15:22.30:22,0,98	0/0:13,0:13:1.35:0,1,88	1/1:9,0:7:2.49:5,2,0
chr10	43586433	.	TA	T	1922.86	PASS	AB=0.941;AC=37;AF=0.712;AN=52;BaseQRankSum=0.130;DP=364;FS=6.617;HRun=1;HaplotypeScore=91.8612;InbreedingCoeff=0.1734;MQ=32.55;MQ0=42;MQRankSum=-2.019;QD=6.30;ReadPosRankSum=3.096;VQSLOD=0.8365;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:22.68:0,23,254	1/1:5,0:5:8.90:60,9,0	./.	./.	1/1:7,6:13:23.07:137,23,0	0/1:21,1:22:23.87:24,0,150	0/0:15,0:14:31.81:0,32,336	1/1:22,0:17:41.11:256,41,0	0/0:3,0:3:3.01:0,3,41	0/1:15,0:14:24.25:67,0,24	0/1:20,0:19:0.08:101,0,0	1/1:9,0:9:14.69:90,15,0	1/1:11,0:11:26.40:159,26,0	1/1:7,0:7:20.57:127,21,0	1/1:12,0:12:6.10:26,6,0	1/1:13,0:12:12.09:65,12,0	0/1:14,0:11:14.57:15,0,58	0/1:18,0:15:12.42:12,0,85	1/1:17,0:17:25.84:237,26,0	1/1:17,0:16:30.90:166,31,0	0/1:9,1:6:16.46:32,0,16	1/1:12,1:12:24.85:153,25,0	1/1:8,1:8:8.87:58,9,0	0/1:1,2:2:0:0,0,0	1/1:18,0:17:25.68:143,26,0	0/1:15,0:15:59.32:90,0,59	0/1:13,0:13:41.43:41,0,52	1/1:9,0:7:5.36:22,5,0
chr10	43586450	.	TGA	T	249.50	PASS	AB=0.862;AC=26;AF=0.565;AN=46;BaseQRankSum=1.013;DP=388;FS=7.102;HRun=0;HaplotypeScore=109.3842;InbreedingCoeff=0.3042;MQ=31.55;MQ0=60;MQRankSum=-1.966;QD=1.30;ReadPosRankSum=1.320;VQSLOD=1.6718;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:28,1:29:10.13:10,0,110	./.	./.	./.	1/1:9,2:11:3.01:33,3,0	1/1:20,0:19:11.65:86,12,0	1/1:14,2:15:3.01:33,3,0	0/0:26,0:20:10.24:0,10,79	1/1:2,1:3:3.01:33,3,0	0/0:15,0:14:11.97:0,12,109	0/0:18,0:18:2.99:0,3,23	1/1:7,0:7:2.88:15,3,0	1/1:9,0:8:2.88:15,3,0	1/1:7,0:10:5.68:28,6,0	0/1:9,0:12:18.61:19,0,23	0/1:10,0:11:12.54:13,0,43	0/1:9,4:12:44.25:44,0,200	0/0:20,0:18:21.95:0,22,188	0/0:14,0:12:6:0,6,52	1/1:14,0:13:0.89:2,1,0	0/0:8,0:7:6.41:0,6,48	./.	1/1:11,0:10:3.31:15,3,0	1/1:2,0:4:5.77:31,6,0	1/1:20,0:20:4.84:23,5,0	0/0:19,0:19:13.35:0,13,112	0/0:12,0:12:5.79:0,6,81	./.
chr10	43586457	.	G	GAGAA	2428.14	PASS	AB=0.864;AC=18;AF=0.360;AN=50;BaseQRankSum=1.077;DP=399;FS=12.407;HRun=0;HaplotypeScore=110.9938;InbreedingCoeff=0.7512;MQ=33.16;MQ0=67;MQRankSum=-2.399;QD=16.86;ReadPosRankSum=-0.246;VQSLOD=2.3048;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:15.03:0,15,265	0/0:4,0:4:5.96:0,6,45	./.	./.	0/0:8,0:8:3.01:0,3,36	0/0:23,0:21:23.55:0,24,195	0/0:18,0:17:14.85:0,15,116	0/0:25,0:20:46.46:0,46,347	0/0:5,0:5:8.78:0,9,70	1/1:18,0:16:15.72:210,16,0	1/1:16,3:19:25.84:187,26,0	0/0:12,0:10:11.89:0,12,94	0/0:8,0:7:8.88:0,9,70	0/0:10,0:10:11.91:0,12,97	0/0:12,0:12:14.89:0,15,134	0/0:9,0:9:14.96:0,15,145	0/0:17,0:16:35.98:0,36,449	1/1:18,3:19:25:500,25,0	0/1:13,0:10:1.13:88,0,1	1/1:11,0:10:22.60:146,23,0	0/1:5,2:6:7.83:83,0,8	./.	0/0:13,0:11:5.95:0,6,51	0/0:9,0:8:11.91:0,12,96	1/1:15,3:18:31.95:388,32,0	1/1:17,2:18:18.13:556,18,0	1/1:8,2:10:24:418,24,0	1/1:7,0:5:5.92:39,6,0
chr10	43586492	.	AGG	A	1013.59	PASS	AB=0.988;AC=21;AF=0.375;AN=56;BaseQRankSum=1.822;DP=422;FS=6.108;HRun=3;HaplotypeScore=87.7194;InbreedingCoeff=0.5666;MQ=40.88;MQ0=34;MQRankSum=-2.361;QD=5.51;ReadPosRankSum=0.678;VQSLOD=-0.1870;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:27:20.19:0,20,317	0/0:5,0:5:11.98:0,12,102	1/1:11,0:2:2.04:6,2,0	0/0:23,0:5:5.69:0,6,32	0/0:10,0:10:4.39:0,4,65	0/0:21,0:19:17.73:0,18,207	0/0:14,0:11:0.70:0,1,82	0/0:31,0:28:35.36:0,35,395	0/1:7,0:7:7.98:8,0,68	0/1:13,0:10:8.11:66,0,8	1/1:16,0:16:9.72:76,10,0	0/0:12,0:10:10.40:0,10,139	0/1:11,0:10:4.88:5,0,74	0/0:13,0:12:20.74:0,21,146	0/0:17,0:17:36.65:0,37,261	0/0:10,0:10:23.95:0,24,140	0/0:22,0:21:11.62:0,12,525	1/1:21,1:20:24.01:265,24,0	1/1:13,0:8:10.64:94,11,0	0/1:11,0:10:0:0,0,0	1/1:14,0:10:7.53:68,8,0	0/0:16,0:15:23.93:0,24,199	0/1:14,1:12:3.16:3,0,113	0/0:13,0:12:28.68:0,29,216	1/1:16,2:18:22.80:173,23,0	1/1:19,1:19:33.21:261,33,0	1/1:13,0:13:21.77:172,22,0	0/0:4,0:3:2.97:0,3,20
chr10	43588214	.	AC	A	3726.02	PASS	AB=0.954;AC=47;AF=0.839;AN=56;BaseQRankSum=0.205;DP=463;FS=16.094;HRun=1;HaplotypeScore=60.5970;InbreedingCoeff=0.4987;MQ=55.88;MQ0=34;MQRankSum=-4.692;QD=10.93;ReadPosRankSum=-1.122;VQSLOD=0.0307;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:25,1:24:51.19:51,0,224	1/1:6,0:6:9.44:75,9,0	0/0:51,1:15:12.65:0,13,125	0/0:60,0:19:6.26:0,6,190	1/1:19,0:19:39.79:238,40,0	0/1:14,0:12:2.44:2,0,207	0/1:16,2:18:36.85:37,0,198	1/1:19,0:16:35.63:235,36,0	0/0:10,0:10:3.70:0,4,167	1/1:11,0:8:21.90:153,22,0	1/1:11,0:9:20.67:103,21,0	1/1:6,0:6:17.96:150,18,0	1/1:6,0:6:15:130,15,0	1/1:9,1:9:26.74:202,27,0	1/1:10,0:10:24.06:199,24,0	1/1:7,0:6:12:104,12,0	1/1:26,0:26:39.21:364,39,0	1/1:20,0:19:42.06:242,42,0	1/1:19,0:15:32.45:192,32,0	1/1:8,0:7:13.13:68,13,0	1/1:2,2:2:2.94:18,3,0	1/1:13,0:12:26.17:183,26,0	1/1:5,0:4:11.93:90,12,0	1/1:24,0:24:41.88:301,42,0	1/1:8,0:7:7.59:29,8,0	1/1:19,0:18:38.79:238,39,0	1/1:11,0:10:18.16:90,18,0	1/1:21,0:18:42.44:232,42,0
chr10	43588413	.	GGAGGAA	G	2099.69	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=5.443;DP=443;FS=10.225;HRun=0;HaplotypeScore=90.4795;InbreedingCoeff=0.9588;MQ=60.62;MQ0=6;MQRankSum=-9.043;QD=31.81;ReadPosRankSum=2.005;VQSLOD=2.2134;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:66.06:0,66,2037	1/1:1,9:10:21.07:462,21,0	0/0:28,0:11:9:0,9,191	0/0:37,0:24:38.57:0,39,929	0/0:14,0:14:39.13:0,39,1075	0/0:13,0:13:33.04:0,33,777	0/0:16,0:16:48.09:0,48,1348	0/0:17,0:16:27.07:0,27,530	0/0:10,0:9:27.08:0,27,754	0/0:16,0:16:42.14:0,42,1375	0/0:17,0:17:45.15:0,45,1371	0/0:12,0:12:36.12:0,36,1222	0/0:4,0:4:9.03:0,9,302	0/0:8,0:8:24.08:0,24,743	1/1:0,20:20:44.96:987,45,0	1/1:2,13:15:21.07:461,21,0	1/1:5,16:21:17.93:348,18,0	0/0:20,0:20:57.17:0,57,1545	0/0:17,0:13:33.10:0,33,779	0/0:12,0:12:30.09:0,30,920	0/0:11,0:11:33.10:0,33,920	0/0:6,0:6:17.99:0,18,490	0/0:16,0:16:48.15:0,48,1494	0/0:16,0:16:45.14:0,45,1371	0/0:12,0:12:33.11:0,33,967	0/0:28,0:28:75.13:0,75,2127	0/0:14,0:14:42.13:0,42,1148	0/0:7,0:7:21.07:0,21,713
chr10	43588522	.	AT	A	4308.08	PASS	AB=0.704;AC=26;AF=0.464;AN=56;BaseQRankSum=7.216;DP=526;FS=12.320;HRun=11;HaplotypeScore=59.7947;InbreedingCoeff=0.7889;MQ=75.99;MQ0=1;MQRankSum=-0.583;QD=17.44;ReadPosRankSum=0.131;VQSLOD=4.8991;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:51,2:53:99:0,105,1292	0/0:5,0:5:12.01:0,12,114	0/0:18,0:16:8.13:0,8,128	0/0:18,1:17:1.57:0,2,206	0/0:18,0:18:47.87:0,48,462	0/0:21,0:21:53.94:0,54,542	0/0:16,1:17:17.45:0,17,384	1/1:8,24:32:42.89:554,43,0	0/0:19,2:21:26.47:0,26,479	1/1:4,12:16:35.89:288,36,0	1/1:1,4:6:11.02:80,11,0	0/0:18,1:19:2.07:0,2,406	0/0:13,0:13:39.02:0,39,392	0/0:11,0:11:27.06:0,27,281	1/1:0,18:19:46.97:375,47,0	1/1:3,10:13:26.91:216,27,0	0/0:25,2:26:16.88:0,17,590	1/1:4,20:25:55.95:449,56,0	1/1:3,16:21:51.96:395,52,0	1/1:0,10:10:26.97:222,27,0	1/1:4,29:33:26.90:583,27,0	0/1:12,2:14:10.19:10,0,306	0/0:10,0:11:24.04:0,24,243	0/0:25,1:26:57.09:0,57,588	1/1:0,13:13:35.95:296,36,0	1/1:2,17:19:52.94:418,53,0	1/1:4,14:18:35.94:296,36,0	0/1:1,7:8:11:127,0,11
chr10	43589156	.	CTGTGTGTGTGCCGTGTGTG	C	1586.96	PASS	AB=1.000;AC=17;AF=0.315;AN=54;BaseQRankSum=1.007;DP=513;FS=11.798;HRun=0;HaplotypeScore=217.5272;InbreedingCoeff=0.6713;MQ=66.16;MQ0=12;MQRankSum=-2.804;QD=11.84;ReadPosRankSum=0.702;VQSLOD=1.5216;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:25:39.09:0,39,803	0/0:9,0:9:11.39:0,11,166	0/0:36,0:15:30.02:0,30,503	0/0:49,0:25:51.12:0,51,929	0/0:6,0:6:9.03:0,9,305	0/0:24,0:24:57.20:0,57,2768	0/0:21,0:21:48.16:0,48,2623	0/0:35,0:33:78.24:0,78,1565	0/0:19,0:19:46.04:0,46,1279	1/1:6,0:6:15.05:249,15,0	1/1:4,1:4:6.02:104,6,0	0/0:24,0:24:57.20:0,57,2108	0/0:17,0:17:45.12:0,45,1470	0/0:22,0:22:48.12:0,48,1740	0/0:11,0:11:27.09:0,27,1289	0/0:16,0:16:36.12:0,36,1331	0/1:19,0:17:59.36:59,0,418	1/1:10,0:8:19.62:316,20,0	1/1:6,0:6:12.04:209,12,0	./.	0/1:44,0:43:0:0,0,0	0/0:9,0:9:17.98:0,18,587	0/0:15,0:15:27.09:0,27,704	0/0:31,0:31:59.56:0,60,2493	1/1:1,7:8:3.01:134,3,0	0/1:17,0:17:51.65:237,0,52	1/1:6,9:16:6.02:295,6,0	1/1:0,3:3:3.01:157,3,0
chr10	43589165	.	TGCC	T	1127.10	PASS	AB=0.543;AC=16;AF=0.296;AN=54;BaseQRankSum=2.224;DP=471;FS=8.513;HRun=0;HaplotypeScore=94.7621;InbreedingCoeff=0.7215;MQ=59.21;MQ0=15;MQRankSum=-2.996;QD=11.99;ReadPosRankSum=-0.182;VQSLOD=2.6939;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,1:22:39.09:0,39,704	0/0:9,0:9:12:0,12,213	0/0:32,0:11:30.02:0,30,493	0/0:46,0:22:47.69:0,48,902	0/0:3,0:3:9.03:0,9,165	0/0:24,0:24:58.44:0,58,1216	0/0:24,1:25:63.10:0,63,1191	0/0:34,0:32:86.88:0,87,1679	0/0:19,0:19:48.78:0,49,929	1/1:0,6:6:15.05:254,15,0	1/1:4,0:3:6.02:104,6,0	0/0:21,0:20:33.79:0,34,770	0/0:16,1:17:3.32:0,3,481	0/0:21,0:21:47.44:0,47,755	0/0:10,0:10:26.44:0,26,399	0/0:14,0:14:35.86:0,36,601	0/0:20,0:17:29.99:0,30,482	1/1:7,2:7:21.07:371,21,0	1/1:3,2:5:12.04:209,12,0	./.	0/1:2,35:35:0:1,0,0	0/0:12,0:12:17.62:0,18,210	0/0:11,0:11:27.09:0,27,510	0/0:27,1:28:62.30:0,62,1005	1/1:7,0:7:1.82:5,2,0	0/1:3,9:12:47.30:271,0,47	1/1:10,1:11:6:54,6,0	1/1:3,0:3:3:26,3,0
chr10	43589166	.	GC	G	538.40	PASS	AB=0.972;AC=15;AF=0.278;AN=54;BaseQRankSum=4.324;DP=464;FS=20.775;HRun=2;HaplotypeScore=86.2824;InbreedingCoeff=0.7291;MQ=58.21;MQ0=15;MQRankSum=-1.701;QD=5.85;ReadPosRankSum=0.004;VQSLOD=-0.7066;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:21:36.01:0,36,459	0/0:9,0:9:9.03:0,9,134	0/0:32,0:11:30.03:0,30,359	0/0:45,0:21:48.01:0,48,609	0/0:3,0:3:9.03:0,9,122	0/0:23,0:24:57.19:0,57,820	0/0:25,0:25:63.18:0,63,858	0/0:34,0:32:60.99:0,61,1132	0/0:19,0:19:50.99:0,51,687	1/1:6,0:6:14.99:134,15,0	1/1:2,2:3:6.01:55,6,0	0/0:20,1:20:53.55:0,54,595	0/0:17,0:17:38.86:0,39,397	0/0:21,0:21:45.02:0,45,547	0/0:9,0:9:26.63:0,27,278	0/0:13,0:13:35.96:0,36,436	0/0:19,0:16:23.98:0,24,306	1/1:4,6:8:21.51:222,22,0	1/1:2,2:4:12.01:111,12,0	./.	0/1:36,0:35:0:0,0,0	0/0:10,2:12:11.79:0,12,130	0/0:11,0:11:27.04:0,27,353	0/0:27,1:28:60.04:0,60,720	0/1:7,0:7:0:0,0,0	0/1:10,0:11:23.91:150,0,24	1/1:11,0:11:5.02:21,5,0	1/1:3,0:3:2.22:7,2,0
chr10	43589168	.	CGTGT	C	1646.60	PASS	AB=0.858;AC=28;AF=0.636;AN=44;BaseQRankSum=3.683;DP=471;FS=10.039;HRun=0;HaplotypeScore=100.3796;InbreedingCoeff=0.4641;MQ=55.75;MQ0=19;MQRankSum=-3.071;QD=6.28;ReadPosRankSum=2.185;VQSLOD=1.4763;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:20,0:22:0:0,0,0	0/1:4,0:9:0:0,0,0	./.	./.	0/0:3,0:3:2.74:0,3,12	0/0:24,0:24:30.07:0,30,490	0/1:26,1:27:10.44:10,0,687	0/1:30,0:29:10.47:33,0,10	0/0:22,0:22:14.07:0,14,225	./.	./.	1/1:12,8:20:27.09:400,27,0	1/1:9,7:16:24.08:371,24,0	1/1:12,9:21:18.05:276,18,0	0/0:4,0:8:13.91:0,14,72	0/0:9,0:13:10.98:0,11,49	1/1:15,0:18:2.67:28,3,0	1/1:11,0:9:5.91:39,6,0	./.	1/1:9,0:9:1.25:3,1,0	./.	1/1:7,5:12:6.02:93,6,0	1/1:8,3:11:3:47,3,0	1/1:16,11:27:27.08:396,27,0	1/1:7,0:7:1.82:5,2,0	0/0:11,0:11:0:0,0,0	1/1:11,0:11:6.01:56,6,0	1/1:3,0:3:3:28,3,0
chr10	43589175	.	G	GC	283.76	PASS	AB=0.911;AC=11;AF=0.196;AN=56;BaseQRankSum=1.371;DP=510;FS=20.421;HRun=0;HaplotypeScore=97.7839;InbreedingCoeff=0.1408;MQ=51.34;MQ0=26;MQRankSum=-1.034;QD=2.23;ReadPosRankSum=-4.433;VQSLOD=-0.3812;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:25:25.46:0,25,325	0/1:10,0:10:14.06:14,0,112	0/0:28,0:6:15.05:0,15,197	0/0:37,0:12:27.51:0,28,334	0/0:6,0:6:15:0,15,185	0/0:27,0:27:72.23:0,72,976	0/0:29,0:29:72.12:0,72,954	0/0:37,0:32:84.18:0,84,1082	0/0:22,0:22:56.15:0,56,772	0/1:8,1:8:79.63:80,0,83	0/1:9,0:8:14.75:15,0,72	0/0:17,0:16:41.08:0,41,319	0/0:19,0:18:16.04:0,16,356	0/0:22,0:22:44.55:0,45,465	0/0:11,0:11:29.87:0,30,305	0/0:14,0:13:29.87:0,30,308	0/0:20,0:17:20.72:0,21,230	0/1:10,3:10:90.33:90,0,189	0/1:5,2:7:76.99:77,0,147	1/1:10,0:10:1.55:4,2,0	0/1:43,3:43:18.46:42,0,18	0/0:12,0:12:11.49:0,11,115	0/0:9,0:9:20.68:0,21,245	0/0:31,0:31:56.40:0,56,565	1/1:9,0:9:8.69:76,9,0	0/0:9,0:9:17.79:0,18,219	0/1:13,0:12:5.50:28,0,6	0/0:3,0:3:2.04:0,2,6
chr10	43589177	.	G	GC	66.27	PASS	AB=0.896;AC=5;AF=0.089;AN=56;BaseQRankSum=2.421;DP=524;FS=12.153;HRun=0;HaplotypeScore=102.2730;InbreedingCoeff=0.1979;MQ=51.06;MQ0=29;MQRankSum=-1.249;QD=1.62;ReadPosRankSum=-2.874;VQSLOD=0.6652;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:24:25.06:0,25,314	0/1:10,0:10:24.14:24,0,112	0/0:29,0:7:18.06:0,18,238	0/0:38,0:10:21.49:0,21,257	0/0:6,0:6:15:0,15,185	0/0:26,0:26:69.23:0,69,953	0/0:29,0:29:75.11:0,75,977	0/0:37,0:32:83.61:0,84,1133	0/0:22,0:22:56.14:0,56,780	0/0:10,0:9:12.51:0,13,156	0/1:6,4:10:38.48:38,0,75	0/0:16,0:15:38.13:0,38,305	0/0:19,0:18:47.33:0,47,421	0/0:22,0:22:47.54:0,48,484	0/0:10,0:10:29.88:0,30,321	0/0:13,0:12:32.88:0,33,344	0/0:19,0:17:20.73:0,21,241	0/0:13,0:10:1.49:0,1,174	0/1:9,0:8:19.92:20,0,150	0/0:12,0:12:5.99:0,6,61	0/0:49,0:46:10.33:0,10,157	0/0:12,0:12:11.49:0,11,112	0/0:9,0:9:20.70:0,21,255	0/0:32,0:32:62.43:0,62,640	1/1:10,1:11:7.26:98,7,0	0/0:12,0:12:15.05:0,15,211	0/0:14,0:13:5.17:0,5,16	0/0:5,0:4:2.37:0,2,8
chr10	43589318	.	A	ATTATTATTATTGTTATTG	3486.21	PASS	AB=1.000;AC=28;AF=0.538;AN=52;BaseQRankSum=5.049;DP=303;FS=0.000;HRun=0;HaplotypeScore=127.3829;InbreedingCoeff=0.5885;MQ=57.03;MQ0=3;MQRankSum=-5.153;QD=16.37;ReadPosRankSum=-3.642;VQSLOD=1.1892;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:27.09:0,27,894	1/1:4,0:4:12.02:125,12,0	./.	0/0:7,0:6:7.54:0,8,57	0/1:10,0:10:11.96:12,0,66	0/0:13,0:13:33.04:0,33,971	0/0:6,0:6:12.04:0,12,270	0/1:37,0:34:99:302,0,114	./.	1/1:10,0:9:15.03:161,15,0	1/1:10,0:9:8.82:258,9,0	0/0:5,0:5:12.04:0,12,325	0/0:6,0:5:15.04:0,15,344	0/0:8,0:8:15.05:0,15,350	1/1:6,0:6:3.55:246,4,0	1/1:2,5:12:3.01:249,3,0	1/1:12,0:12:13.18:554,13,0	0/1:13,0:13:2.07:42,0,2	1/1:15,0:14:27.05:374,27,0	1/1:8,0:8:3.01:122,3,0	0/1:10,0:10:1.76:139,0,2	0/0:5,0:5:9:0,9,100	0/0:9,0:9:8.89:0,9,324	0/0:3,0:3:8.97:0,9,88	1/1:14,0:14:9.03:228,9,0	1/1:16,0:15:17.90:176,18,0	1/1:15,0:15:9.03:270,9,0	1/1:21,0:21:15.05:228,15,0
chr10	43589321	.	A	ATTATTATTATTG	3716.04	PASS	AB=1.000;AC=31;AF=0.596;AN=52;BaseQRankSum=5.636;DP=283;FS=0.000;HRun=0;HaplotypeScore=91.4960;InbreedingCoeff=0.7183;MQ=57.13;MQ0=3;MQRankSum=-5.954;QD=18.22;ReadPosRankSum=-4.646;VQSLOD=-0.1999;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:26.97:0,27,611	1/1:4,0:4:11.77:75,12,0	./.	0/0:5,0:5:5.97:0,6,48	1/1:1,6:9:14.81:160,15,0	0/0:15,0:15:35.99:0,36,684	0/0:5,0:5:12:0,12,163	1/1:37,0:35:66:851,66,0	./.	1/1:10,0:9:14.67:92,15,0	1/1:10,0:9:8.70:227,9,0	0/0:4,0:4:12.01:0,12,226	0/0:6,0:5:15:0,15,212	0/0:7,0:7:15:0,15,208	0/1:6,0:6:34.66:36,0,35	1/1:11,0:11:3.01:130,3,0	1/1:13,0:13:12.65:446,13,0	1/1:11,0:11:5.49:108,5,0	1/1:14,0:13:20.84:182,21,0	1/1:7,0:7:3.01:108,3,0	1/1:9,0:9:13.24:179,13,0	0/0:4,0:4:3:0,3,25	0/0:7,0:7:8.98:0,9,240	0/0:3,0:3:5.99:0,6,48	1/1:14,0:14:9.03:287,9,0	1/1:16,0:15:14.93:213,15,0	1/1:14,0:14:9.03:268,9,0	1/1:19,0:19:15.05:354,15,0
chr10	43589327	.	A	ATTGTTGTTG	5480.23	PASS	AB=0.924;AC=26;AF=0.481;AN=54;BaseQRankSum=1.652;DP=259;FS=1.960;HRun=0;HaplotypeScore=60.8855;InbreedingCoeff=0.4581;MQ=52.38;MQ0=3;MQRankSum=-5.887;QD=28.54;ReadPosRankSum=-0.527;VQSLOD=4.0250;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:27.09:0,27,734	0/1:5,0:5:33.92:185,0,34	./.	0/0:5,0:4:7.58:0,8,105	0/1:7,0:7:6.72:7,0,29	0/0:13,0:13:39.13:0,39,964	0/0:4,0:4:12.04:0,12,296	0/1:35,0:33:99:372,0,132	0/0:2,0:2:3:0,3,25	1/1:1,9:10:18.06:331,18,0	1/1:0,9:9:9.02:303,9,0	0/0:4,0:4:12.04:0,12,334	0/0:6,0:5:15.05:0,15,323	0/0:6,0:6:15.05:0,15,392	0/1:6,0:6:7.02:142,0,7	1/1:7,0:7:3.01:113,3,0	0/1:14,0:14:16.49:393,0,16	0/1:2,8:12:4.55:207,0,5	1/1:11,0:10:30.07:567,30,0	1/1:0,7:8:6.02:174,6,0	1/1:8,0:8:18.06:410,18,0	0/0:3,0:3:9:0,9,125	0/0:5,0:5:8.70:0,9,236	0/0:3,0:3:8.99:0,9,136	1/1:1,10:14:9.03:429,9,0	1/1:0,12:17:29.28:710,29,0	1/1:2,13:16:9.03:405,9,0	1/1:0,9:10:15.05:732,15,0
chr10	43589690	.	T	TA	1110.28	PASS	AB=0.577;AC=10;AF=0.179;AN=56;BaseQRankSum=-7.051;DP=484;FS=3.498;HRun=11;HaplotypeScore=64.7627;InbreedingCoeff=0.6929;MQ=65.48;MQ0=1;MQRankSum=1.211;QD=17.08;ReadPosRankSum=1.183;VQSLOD=4.7947;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,1:19:14.37:0,14,295	0/0:5,0:5:11.95:0,12,93	0/0:11,0:7:8.92:0,9,65	0/0:10,0:8:3.21:0,3,66	0/0:26,0:27:58.78:0,59,447	0/0:21,0:21:59.75:0,60,462	0/0:12,0:14:31.91:0,32,235	0/0:36,0:37:88.57:0,89,668	0/0:17,0:17:38.83:0,39,300	0/0:23,1:23:11.35:0,11,271	0/0:20,0:19:35.75:0,36,269	1/1:2,10:12:27.05:274,27,0	1/1:4,12:16:33.07:335,33,0	0/1:2,5:7:11.20:79,0,11	0/0:23,0:23:56.70:0,57,439	0/0:20,0:20:53.79:0,54,418	0/0:19,0:19:42.71:0,43,327	0/0:11,0:12:31.83:0,32,228	0/0:23,1:24:26.26:0,26,382	0/0:12,0:12:23.88:0,24,186	0/0:7,0:7:14.94:0,15,116	0/1:2,6:8:5.20:134,0,5	1/1:2,8:11:3.65:204,4,0	1/1:3,8:11:24.05:244,24,0	0/0:21,0:21:44.78:0,45,345	0/0:20,0:22:47.70:0,48,340	0/0:27,0:28:44.86:0,45,487	0/0:24,1:25:44.28:0,44,527
chr10	43591160	.	CTT	C	2037.47	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=6.949;DP=505;FS=10.329;HRun=16;HaplotypeScore=65.2614;InbreedingCoeff=0.9258;MQ=59.81;MQ0=8;MQRankSum=-1.189;QD=10.29;ReadPosRankSum=5.737;VQSLOD=1.3230;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:42:96.02:0,96,932	0/0:7,0:7:20.07:0,20,203	0/0:19,0:9:6.69:0,7,45	0/0:19,0:6:3.01:0,3,31	0/0:22,0:25:47.35:0,47,479	0/0:19,0:23:55.94:0,56,659	0/0:12,0:15:34.79:0,35,355	0/0:21,0:23:50.45:0,50,547	0/0:9,0:9:27.05:0,27,322	1/1:11,11:22:32.22:275,32,0	1/1:1,8:10:26.72:211,27,0	0/0:17,0:18:40.97:0,41,399	0/0:11,0:12:22.14:0,22,253	0/0:10,1:14:12.07:0,12,290	1/1:4,0:21:38.35:164,38,0	1/1:3,0:14:19.13:82,19,0	0/0:25,0:25:55.25:0,55,541	1/1:8,18:24:35.60:364,36,0	1/1:15,7:22:7.85:207,8,0	1/1:1,5:7:14.65:112,15,0	1/1:4,5:9:5.89:50,6,0	0/0:12,0:11:24.03:0,24,257	0/0:15,0:16:32.72:0,33,336	0/0:24,0:25:52.92:0,53,536	1/1:3,8:13:20.90:217,21,0	1/1:9,14:22:28.65:243,29,0	1/1:8,11:19:20.66:175,21,0	1/1:4,6:11:17.75:157,18,0
chr10	43591374	.	A	ATTTT	4612.47	PASS	AB=1.000;AC=31;AF=0.554;AN=56;BaseQRankSum=2.592;DP=402;FS=14.069;HRun=11;HaplotypeScore=105.0887;InbreedingCoeff=0.8600;MQ=68.28;MQ0=1;MQRankSum=-7.012;QD=20.68;ReadPosRankSum=-2.767;VQSLOD=1.2480;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:38:78.82:0,79,1046	1/1:4,0:5:11.86:88,12,0	0/0:15,0:15:7.65:0,8,275	0/1:17,0:15:1.59:2,0,204	0/0:5,0:13:8.56:0,9,22	0/0:20,0:20:57.11:0,57,723	0/0:24,0:26:56.98:0,57,715	1/1:8,0:20:15.72:131,16,0	0/0:10,0:10:15.01:0,15,204	1/1:5,6:11:27.03:460,27,0	1/1:4,8:12:27.05:514,27,0	0/0:9,0:9:14.93:0,15,203	0/0:6,0:6:15.03:0,15,203	0/0:9,0:9:21.05:0,21,277	1/1:6,0:21:39:449,39,0	1/1:1,1:8:15.04:210,15,0	1/1:4,0:30:69.38:420,69,0	1/1:9,3:12:15:255,15,0	1/1:9,3:14:20.98:319,21,0	1/1:8,4:14:18.95:343,19,0	1/1:7,0:7:6:53,6,0	0/0:8,0:9:5.20:0,5,117	0/0:9,0:10:19.95:0,20,304	0/0:14,0:14:26.89:0,27,345	1/1:6,6:12:17.23:304,17,0	1/1:8,9:19:37.35:690,37,0	1/1:4,8:14:18.02:306,18,0	1/1:0,2:3:3.01:69,3,0
chr10	43591639	.	G	GA	923.38	PASS	AB=0.879;AC=13;AF=0.232;AN=56;BaseQRankSum=-1.339;DP=480;FS=8.992;HRun=13;HaplotypeScore=75.9420;InbreedingCoeff=0.1953;MQ=56.61;MQ0=6;MQRankSum=-1.500;QD=6.00;ReadPosRankSum=1.321;VQSLOD=1.9124;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,1:36:27.55:0,28,429	1/1:1,2:3:9:80,9,0	0/1:37,0:14:0.15:0,0,154	0/0:24,0:10:15.94:0,16,115	0/1:9,1:12:19.54:20,0,86	0/1:11,1:12:7.23:7,0,95	0/0:12,0:15:0.75:0,1,129	0/0:21,1:22:4.16:0,4,198	0/0:13,1:15:33.80:0,34,210	0/1:16,2:18:21.39:21,0,155	0/0:10,0:11:22.82:0,23,150	0/0:15,0:16:36.18:0,36,216	0/0:11,0:12:17.34:0,17,109	0/0:11,0:11:23.77:0,24,164	0/1:5,3:8:15.96:16,0,50	1/1:2,7:10:8.18:106,8,0	1/1:14,21:38:77.42:797,77,0	0/0:19,1:21:3.81:0,4,295	0/0:12,0:13:4.25:0,4,161	0/1:4,1:6:16.52:17,0,36	0/0:25,0:26:40.63:0,41,271	0/0:13,0:15:18.63:0,19,147	0/0:12,0:12:22.10:0,22,161	0/0:21,1:27:12.09:0,12,297	0/1:7,1:7:12.83:13,0,67	0/0:23,0:23:29.74:0,30,290	0/0:20,1:22:6.43:0,6,173	0/0:5,0:5:2.96:0,3,21
chr10	43591668	.	AGAAG	A	5380.22	PASS	AB=0.786;AC=18;AF=0.333;AN=54;BaseQRankSum=6.442;DP=477;FS=23.043;HRun=0;HaplotypeScore=93.9978;InbreedingCoeff=0.8127;MQ=59.20;MQ0=4;MQRankSum=-4.434;QD=29.72;ReadPosRankSum=1.097;VQSLOD=2.6662;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:62.02:0,62,1449	0/0:4,0:4:6.02:0,6,153	0/1:27,0:11:22.88:23,0,31	0/0:28,0:13:17.96:0,18,289	0/0:10,0:10:30.10:0,30,739	0/0:12,0:12:33:0,33,724	0/0:16,0:16:42.10:0,42,921	0/0:19,0:19:45.15:0,45,1002	0/0:19,0:19:48.15:0,48,1130	1/1:3,12:15:36.11:573,36,0	1/1:2,6:8:18.06:306,18,0	0/0:20,0:20:54.11:0,54,1158	0/0:15,0:15:39.13:0,39,894	0/0:15,0:15:42.14:0,42,979	0/0:16,0:16:42.14:0,42,1046	0/0:8,0:8:21.07:0,21,533	0/0:35,0:34:83.65:0,84,1891	0/1:5,15:20:38.11:537,0,38	1/1:1,21:21:63.21:1018,63,0	1/1:4,10:14:39.09:618,39,0	1/1:3,19:22:33.07:516,33,0	0/0:12,0:12:36.12:0,36,812	0/0:10,0:10:24.08:0,24,609	0/0:29,0:29:66.22:0,66,1589	1/1:1,5:6:18.06:307,18,0	1/1:6,21:27:63.22:1095,63,0	1/1:6,13:19:23.36:389,23,0	./.
chr10	43592216	.	G	GA	341.71	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=0.355;DP=485;FS=6.261;HRun=8;HaplotypeScore=90.9240;InbreedingCoeff=0.5196;MQ=48.96;MQ0=28;MQRankSum=-5.977;QD=15.53;ReadPosRankSum=-4.904;VQSLOD=2.5991;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,102,930	0/0:9,0:9:11.92:0,12,108	0/0:15,0:2:2.59:0,3,10	0/0:22,0:6:0.68:0,1,20	0/0:31,0:31:59.91:0,60,531	0/0:11,0:11:30.02:0,30,274	0/0:14,0:14:30:0,30,274	1/1:8,14:22:17.68:431,18,0	0/0:18,0:18:26.93:0,27,246	0/0:24,0:23:27.81:0,28,376	0/0:15,0:15:39.02:0,39,356	0/0:12,0:12:14.45:0,14,137	0/0:10,0:10:17.66:0,18,164	0/0:12,0:12:11.60:0,12,127	0/0:11,0:11:14.99:0,15,137	0/0:19,0:19:32.98:0,33,302	0/0:19,0:18:34.99:0,35,316	0/0:21,0:19:31.71:0,32,286	0/0:20,0:19:16.93:0,17,274	0/0:26,0:27:37.58:0,38,429	0/0:7,0:6:5.98:0,6,55	0/0:15,0:15:24:0,24,218	0/0:8,0:8:5.14:0,5,53	0/0:17,0:17:23.33:0,23,196	0/0:15,0:15:30:0,30,274	0/0:15,0:15:35.97:0,36,325	0/0:23,0:21:26.08:0,26,244	0/0:5,0:5:5.99:0,6,54
chr10	43592619	.	AGAGG	A	3525.44	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.271;DP=699;FS=4.650;HRun=0;HaplotypeScore=119.6892;InbreedingCoeff=0.9999;MQ=85.21;MQ0=0;MQRankSum=-1.880;QD=52.62;ReadPosRankSum=2.351;VQSLOD=4.9365;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,117,2975	0/0:16,0:16:48.16:0,48,1307	0/0:26,0:26:72.25:0,72,1818	0/0:22,0:22:57.12:0,57,1485	0/0:18,0:18:54.19:0,54,1419	0/0:20,0:20:60.21:0,60,1644	0/0:26,0:26:78.24:0,78,2021	0/0:23,0:23:60.21:0,60,1641	0/0:32,0:32:96.32:0,96,2555	0/0:23,0:23:69.24:0,69,1831	0/0:25,0:25:72.25:0,72,1955	0/0:26,0:26:75.26:0,75,2055	0/0:18,0:18:51.18:0,51,1387	0/0:28,0:28:84.29:0,84,2289	1/1:0,32:32:87.30:1666,87,0	1/1:2,33:35:96.33:1859,96,0	0/0:26,0:26:72.25:0,72,1951	0/0:16,0:16:48.16:0,48,1247	0/0:13,0:13:39.13:0,39,1016	0/0:27,0:27:75.26:0,75,2033	0/0:31,0:31:90.31:0,90,2415	0/0:32,0:32:93.31:0,93,2429	0/0:15,0:14:45.14:0,45,1175	0/0:26,0:26:72.25:0,72,1940	0/0:17,0:17:45.15:0,45,1233	0/0:34,0:34:99:0,102,2705	0/0:32,0:30:93.32:0,93,2545	0/0:18,0:18:48.16:0,48,1315
chr10	43593307	.	GCAAC	G	1914.21	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.616;DP=649;FS=18.707;HRun=0;HaplotypeScore=102.8782;InbreedingCoeff=0.9974;MQ=72.56;MQ0=0;MQRankSum=-2.669;QD=32.44;ReadPosRankSum=1.436;VQSLOD=2.4781;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:96.29:0,96,2291	0/0:8,0:8:21.07:0,21,524	0/0:23,0:21:42.14:0,42,988	0/0:22,0:22:57.16:0,57,1333	0/0:17,0:17:39.13:0,39,971	0/0:18,0:18:51.18:0,51,1273	0/0:26,0:26:48.15:0,48,1144	0/0:26,0:26:51.18:0,51,1274	0/0:23,0:23:57.20:0,57,1394	0/0:22,0:22:57.20:0,57,1419	0/0:16,0:16:39.13:0,39,947	0/0:25,0:25:63.22:0,63,1536	0/0:25,0:25:57.18:0,57,1370	0/0:23,0:23:57.20:0,57,1415	1/1:4,20:24:48.16:814,48,0	1/1:3,32:35:72.12:1221,72,0	0/0:34,0:33:96.33:0,96,2357	0/0:23,0:23:66.23:0,66,1578	0/0:20,0:20:51.15:0,51,1124	0/0:19,0:19:51.17:0,51,1224	0/0:25,0:25:72.22:0,72,1720	0/0:24,0:24:66.23:0,66,1611	0/0:16,0:16:33.11:0,33,786	0/0:33,0:33:93.32:0,93,2322	0/0:27,0:27:66.19:0,66,1494	0/0:23,0:23:45.15:0,45,1050	0/0:24,0:23:60.21:0,60,1485	0/0:10,0:10:30.06:0,30,662
chr10	43593451	.	TTC	T	1554.22	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.517;DP=724;FS=0.606;HRun=0;HaplotypeScore=84.4840;InbreedingCoeff=0.9998;MQ=86.36;MQ0=0;MQRankSum=-1.918;QD=33.79;ReadPosRankSum=3.715;VQSLOD=6.0636;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,120,2142	0/0:12,0:12:36.12:0,36,650	0/0:26,0:26:66.21:0,66,1099	0/0:28,0:28:77.61:0,78,1243	0/0:29,0:29:81.28:0,81,1477	0/0:17,0:17:48.16:0,48,879	0/0:30,0:30:84.26:0,84,1478	0/0:31,0:31:84.27:0,84,1470	0/0:21,0:21:57.18:0,57,1014	0/0:22,0:22:60.21:0,60,1100	0/0:28,0:28:84.29:0,84,1525	0/0:24,0:24:66.21:0,66,1160	0/0:25,0:25:75.23:0,75,1301	0/0:22,0:22:63.20:0,63,1088	1/1:1,16:17:39.13:558,39,0	1/1:1,28:29:78.26:1117,78,0	0/0:29,0:29:87.26:0,87,1532	0/0:22,0:22:60.12:0,60,1015	0/0:23,0:23:60.20:0,60,1061	0/0:29,0:29:84.26:0,84,1468	0/0:55,0:55:99:0,163,2886	0/0:15,0:15:42.14:0,42,766	0/0:16,0:16:45.12:0,45,762	0/0:40,0:40:99:0,120,2198	0/0:22,0:22:63.19:0,63,1078	0/0:32,0:32:96.31:0,96,1675	0/0:27,0:26:78.16:0,78,1322	0/0:12,0:12:36.12:0,36,639
chr10	43593923	.	TACCAGC	T	811.17	PASS	AB=0.700;AC=9;AF=0.188;AN=48;BaseQRankSum=0.642;DP=508;FS=0.000;HRun=0;HaplotypeScore=113.6163;InbreedingCoeff=0.7097;MQ=63.53;MQ0=9;MQRankSum=-5.788;QD=8.72;ReadPosRankSum=0.996;VQSLOD=2.3430;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:27.08:0,27,715	0/0:3,0:2:3.01:0,3,38	./.	./.	./.	0/0:17,0:17:18.06:0,18,458	0/0:26,0:26:33.11:0,33,971	0/0:21,0:20:5.96:0,6,45	0/0:27,0:27:28.15:0,28,1189	0/0:10,0:9:15.02:0,15,304	0/0:7,0:6:5.78:0,6,158	1/1:10,7:17:9.03:174,9,0	1/1:7,9:16:11.32:236,11,0	1/1:8,10:18:24.04:441,24,0	0/0:15,0:25:15.04:0,15,263	0/0:13,0:15:21.06:0,21,382	0/0:15,0:23:9.03:0,9,160	0/0:16,0:16:24.04:0,24,617	0/0:18,0:17:15.05:0,15,303	0/0:10,0:10:5.93:0,6,86	0/0:54,0:50:37.22:0,37,486	0/1:4,3:7:0:0,0,0	./.	1/1:17,18:35:6.02:97,6,0	0/0:11,0:11:6.02:0,6,82	0/0:16,0:16:15.05:0,15,262	0/0:20,0:20:20.94:0,21,316	0/0:5,0:5:6.02:0,6,158
chr10	43594108	.	C	CT	4252.40	PASS	AB=0.724;AC=36;AF=0.643;AN=56;BaseQRankSum=-4.053;DP=518;FS=5.427;HRun=12;HaplotypeScore=57.4065;InbreedingCoeff=0.4539;MQ=67.91;MQ0=2;MQRankSum=-3.228;QD=11.37;ReadPosRankSum=-3.349;VQSLOD=3.3979;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:41:73.42:0,73,653	1/1:3,5:8:13.79:119,14,0	0/1:18,1:14:37.43:37,0,57	0/1:14,0:12:19.46:19,0,34	1/1:9,8:17:21.02:196,21,0	0/0:18,0:19:33.34:0,33,314	0/0:22,0:24:35.65:0,36,281	1/1:11,23:34:40.79:507,41,0	0/1:9,1:10:2.29:2,0,148	1/1:8,11:20:32.71:285,33,0	0/1:4,8:12:9.37:75,0,9	0/1:6,12:18:0.87:153,0,1	1/1:3,9:12:21.03:204,21,0	1/1:2,9:11:5.13:210,5,0	0/0:12,0:13:16.88:0,17,115	0/0:8,0:8:17.89:0,18,131	0/0:38,0:38:89.45:0,89,656	1/1:9,19:28:16.73:328,17,0	1/1:5,9:13:21.01:193,21,0	0/1:5,11:16:0.85:137,0,1	1/1:3,11:14:4.17:188,4,0	0/1:4,8:12:0.87:154,0,1	1/1:4,14:19:29.80:264,30,0	1/1:6,16:23:1.96:168,2,0	1/1:4,11:15:21.03:204,21,0	1/1:4,18:23:32:453,32,0	1/1:3,15:19:5.66:213,6,0	0/1:2,10:12:1.03:139,0,1
chr10	43594463	.	GA	G	552.40	PASS	AB=0.625;AC=7;AF=0.125;AN=56;BaseQRankSum=0.348;DP=569;FS=0.000;HRun=15;HaplotypeScore=72.8316;InbreedingCoeff=0.4653;MQ=47.74;MQ0=48;MQRankSum=0.300;QD=5.36;ReadPosRankSum=2.484;VQSLOD=2.4501;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:42.43:0,42,430	1/1:2,7:9:14.77:96,15,0	0/0:19,0:3:2.99:0,3,23	0/0:21,0:5:11.03:0,11,61	0/1:9,17:27:5.30:147,0,5	0/0:19,0:20:15.48:0,15,395	0/0:18,0:17:7.36:0,7,190	0/0:27,0:24:18.58:0,19,289	0/0:16,0:15:29.33:0,29,192	0/0:10,0:21:18.53:0,19,119	0/0:17,0:19:16.72:0,17,159	0/0:7,0:7:15:0,15,132	0/0:21,0:19:21.68:0,22,301	0/0:19,0:17:21.55:0,22,230	0/1:7,8:14:6.71:82,0,7	0/1:9,12:20:13.53:157,0,14	1/1:12,16:27:8.55:205,9,0	0/0:22,0:18:23.18:0,23,121	0/0:12,0:23:24.50:0,24,148	0/0:20,0:26:21.75:0,22,169	0/0:11,0:11:9.14:0,9,49	0/0:15,0:15:38.85:0,39,275	0/0:17,0:17:8.41:0,8,170	0/0:29,0:21:32.71:0,33,268	0/0:7,0:24:19.51:0,20,89	0/0:9,0:17:24.20:0,24,132	0/0:10,0:17:9.19:0,9,58	0/0:7,0:9:12.12:0,12,60
chr10	43595389	.	GGAA	G	5566.16	PASS	AB=0.950;AC=25;AF=0.446;AN=56;BaseQRankSum=10.756;DP=764;FS=40.276;HRun=0;HaplotypeScore=250.4336;InbreedingCoeff=-0.2666;MQ=47.39;MQ0=12;MQRankSum=-8.702;QD=10.94;ReadPosRankSum=6.081;VQSLOD=2.8618;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,112,2376	0/1:1,6:7:42.25:193,0,42	0/0:37,0:14:8.42:0,8,275	0/0:41,0:21:31.31:0,31,518	0/1:25,0:23:99:193,0,102	0/0:24,0:24:66.15:0,66,1257	0/0:45,0:45:99:0,118,2306	0/0:32,0:29:65.24:0,65,1267	0/0:32,0:32:90.19:0,90,1728	0/1:25,0:25:52.93:365,0,53	1/1:10,0:10:20.88:203,21,0	0/1:41,0:42:99:462,0,478	0/1:29,0:29:99:150,0,584	0/1:35,0:37:99:325,0,720	0/1:18,0:18:99:205,0,241	0/1:31,0:31:99:443,0,174	0/1:11,20:30:99:303,0,224	0/1:11,0:11:50.76:89,0,51	0/1:9,0:9:48.16:107,0,48	1/1:27,0:27:38.62:349,39,0	0/1:21,0:17:32.99:88,0,33	0/1:34,0:34:99:421,0,307	0/1:32,0:32:99:334,0,490	0/1:39,0:40:99:236,0,515	0/1:19,0:19:19.70:267,0,20	1/1:32,0:30:4.56:489,5,0	0/1:22,0:20:36.29:263,0,36	1/1:4,0:4:9:82,9,0
chr10	43595402	.	GAAA	G	8646.04	PASS	AB=0.716;AC=26;AF=0.464;AN=56;BaseQRankSum=12.455;DP=730;FS=23.029;HRun=5;HaplotypeScore=223.8547;InbreedingCoeff=-0.1487;MQ=41.17;MQ0=18;MQRankSum=-10.545;QD=17.61;ReadPosRankSum=2.299;VQSLOD=-0.0474;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,1:44:99:0,112,2474	0/1:10,0:10:82.62:83,0,208	0/0:37,0:11:20.03:0,20,467	0/0:35,0:18:45.24:0,45,851	0/1:2,10:16:35.09:297,0,35	0/0:23,0:23:63.22:0,63,1385	0/0:40,0:40:99:0,111,2411	0/0:29,0:24:69.23:0,69,1455	0/0:29,0:29:67.55:0,68,1853	0/1:14,13:24:81.55:591,0,82	0/1:4,8:12:4.53:310,0,5	0/1:31,14:45:99:778,0,679	0/1:24,7:30:99:311,0,637	0/1:30,10:40:99:629,0,953	0/1:12,9:21:99:428,0,534	0/1:11,20:30:99:790,0,332	0/1:30,0:29:99:116,0,695	0/1:7,6:12:35.14:123,0,35	1/1:2,2:3:9.02:126,9,0	0/1:9,17:26:47.89:477,0,48	1/1:16,2:13:9.18:100,9,0	0/1:12,19:31:99:786,0,406	0/1:17,14:31:99:540,0,649	0/1:29,9:38:99:397,0,838	1/1:7,9:16:10.99:430,11,0	1/1:14,16:27:21.29:738,21,0	1/1:7,9:14:30.08:460,30,0	0/1:1,4:5:12.88:138,0,13
chr10	43595554	.	GGAA	G	498.53	PASS	AB=0.967;AC=18;AF=0.321;AN=56;BaseQRankSum=8.431;DP=514;FS=58.443;HRun=0;HaplotypeScore=171.8085;InbreedingCoeff=-0.3015;MQ=36.28;MQ0=16;MQRankSum=-7.225;QD=1.83;ReadPosRankSum=0.186;VQSLOD=0.6819;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:18:41.85:0,42,878	0/1:4,0:3:20.62:34,0,21	0/0:19,0:4:12.03:0,12,190	0/0:15,0:2:2.59:0,3,10	0/1:23,0:22:68.91:69,0,171	0/0:28,0:27:63.31:0,63,1327	0/0:22,0:22:54.15:0,54,1039	0/0:28,0:17:25:0,25,639	0/0:24,0:23:54.57:0,55,1212	0/1:15,0:14:1.60:2,0,165	0/1:7,0:6:20.65:21,0,72	0/1:40,4:42:72.72:73,0,980	0/1:31,1:30:18.68:19,0,884	0/1:44,3:43:14.71:15,0,1319	0/0:9,0:6:10.35:0,10,123	0/1:8,0:8:5.50:6,0,173	0/1:11,0:9:42.05:54,0,42	0/1:8,0:4:17.69:18,0,57	0/0:7,0:2:1.77:0,2,4	0/1:7,0:6:30.58:31,0,39	0/1:8,0:7:6.57:7,0,46	0/0:32,0:32:57.42:0,57,923	0/1:21,1:21:38.96:39,0,523	0/0:35,3:36:63.41:0,63,961	0/1:6,0:6:6.18:79,0,6	0/1:10,2:11:64.75:65,0,117	0/1:14,1:13:83.02:83,0,117	1/1:3,0:1:3.01:40,3,0
chr10	43595559	.	AAG	A	88.52	PASS	AB=0.923;AC=9;AF=0.161;AN=56;BaseQRankSum=7.299;DP=493;FS=29.052;HRun=0;HaplotypeScore=157.1828;InbreedingCoeff=-0.0327;MQ=36.66;MQ0=16;MQRankSum=-5.570;QD=0.85;ReadPosRankSum=1.738;VQSLOD=1.2750;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:18:51.05:0,51,874	0/1:3,1:3:12.04:34,0,12	0/0:17,0:4:12.04:0,12,199	0/0:11,0:1:2.88:0,3,15	0/1:19,1:19:39.05:39,0,148	0/0:26,0:25:68.96:0,69,1213	0/0:23,0:23:57.19:0,57,1013	0/0:29,0:18:47.80:0,48,738	0/0:23,0:22:57.06:0,57,1026	0/0:14,0:13:28.59:0,29,417	0/0:5,0:4:3.59:0,4,130	0/1:39,3:40:42.11:42,0,1308	0/0:34,1:34:39.35:0,39,1219	0/0:45,1:42:62.08:0,62,1756	0/0:8,0:5:14.85:0,15,160	0/0:8,0:8:15.05:0,15,252	0/1:8,1:8:20.74:21,0,101	0/0:9,0:4:8.55:0,9,81	0/0:6,0:2:3.01:0,3,31	0/1:6,1:6:26.87:27,0,119	0/0:8,0:6:11.52:0,12,118	0/0:31,0:31:78.54:0,79,1260	0/0:20,0:20:16.80:0,17,683	0/0:39,0:37:83.09:0,83,1462	0/1:6,0:6:12.14:12,0,39	0/0:10,0:9:1.92:0,2,208	0/1:12,0:9:0.57:1,0,251	1/1:3,1:2:3.01:42,3,0
chr10	43595569	.	A	AAAG	574.82	PASS	AB=0.977;AC=18;AF=0.333;AN=54;BaseQRankSum=7.166;DP=456;FS=51.081;HRun=0;HaplotypeScore=169.1713;InbreedingCoeff=-0.1786;MQ=34.65;MQ0=20;MQRankSum=-6.687;QD=2.59;ReadPosRankSum=1.337;VQSLOD=1.3261;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:15:41.81:0,42,694	1/1:4,0:2:1.82:5,2,0	0/0:6,0:2:3:0,3,28	./.	0/1:20,0:19:21.82:22,0,153	0/0:27,0:26:71.38:0,71,1183	0/0:25,0:25:66.17:0,66,1169	0/0:25,0:12:26.75:0,27,370	0/0:24,0:23:53.99:0,54,1065	0/1:13,2:11:99:146,0,155	0/1:6,0:5:18.89:19,0,94	0/1:38,1:37:99:107,0,893	0/1:33,0:31:16.19:16,0,884	0/0:43,0:39:63.63:0,64,1475	0/1:8,0:5:20.54:21,0,49	0/1:6,0:6:13.64:14,0,133	0/0:8,0:7:1.70:0,2,105	0/0:6,0:3:5.75:0,6,55	1/1:6,0:1:2.98:22,3,0	0/1:10,0:9:41.62:42,0,176	0/0:10,0:7:11.58:0,12,128	0/1:29,0:29:21.69:22,0,820	0/1:16,3:18:99:157,0,479	0/0:38,0:36:84.05:0,84,1239	0/0:3,0:3:9.02:0,9,104	0/1:10,0:9:40.50:41,0,65	0/1:12,0:9:49.56:50,0,68	1/1:5,0:3:3.01:46,3,0
chr10	43595575	.	G	GTAA	279.68	PASS	AB=0.955;AC=13;AF=0.250;AN=52;BaseQRankSum=8.197;DP=441;FS=53.324;HRun=0;HaplotypeScore=178.8309;InbreedingCoeff=-0.0342;MQ=34.75;MQ0=20;MQRankSum=-5.816;QD=2.39;ReadPosRankSum=0.916;VQSLOD=0.6472;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:15:41.75:0,42,641	0/0:2,0:1:2.94:0,3,18	./.	./.	0/1:20,0:18:3.97:4,0,243	0/0:27,0:26:71.59:0,72,1155	0/0:26,0:26:66.16:0,66,1124	0/0:27,0:13:29.51:0,30,290	0/0:24,0:23:43.39:0,43,1035	0/1:15,0:11:89.93:90,0,94	0/1:4,0:4:17.95:18,0,70	0/0:36,0:34:8.17:0,8,925	0/0:31,0:29:42.28:0,42,897	0/0:41,0:37:82.58:0,83,1486	0/0:6,0:4:6.89:0,7,62	0/0:5,0:6:6.49:0,6,118	0/0:6,0:7:9.72:0,10,117	0/1:3,0:3:3.28:3,0,23	1/1:6,0:1:3.01:42,3,0	0/1:7,2:9:53.66:54,0,167	0/1:9,0:7:3.96:4,0,76	0/0:31,0:31:26.15:0,26,796	0/1:19,0:18:39.44:39,0,441	0/0:38,0:36:81.88:0,82,1212	0/0:3,0:3:8.96:0,9,120	0/1:10,0:9:35.60:40,0,36	0/1:11,1:9:47.96:113,0,48	1/1:4,1:4:3.37:9,3,0
chr10	43595578	.	A	AGAG	1582.78	PASS	AB=0.966;AC=26;AF=0.500;AN=52;BaseQRankSum=9.980;DP=434;FS=74.344;HRun=0;HaplotypeScore=164.7870;InbreedingCoeff=-0.3200;MQ=34.75;MQ0=21;MQRankSum=-6.823;QD=4.90;ReadPosRankSum=0.220;VQSLOD=-0.1952;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:15:13.03:0,13,483	1/1:2,0:1:0.47:1,0,0	./.	./.	0/1:20,0:18:50.05:50,0,107	0/0:27,0:26:43.21:0,43,1054	0/0:27,0:27:41.42:0,41,970	0/1:32,0:13:7.11:7,0,84	0/1:24,0:23:20.95:21,0,907	0/1:12,2:10:80.28:248,0,80	0/1:4,1:4:42.89:43,0,54	0/1:34,0:32:99:162,0,709	0/1:31,0:29:49.33:49,0,703	0/1:41,0:37:33.27:33,0,1208	1/1:5,0:3:6.12:44,6,0	0/1:5,0:5:42.84:46,0,43	0/1:8,0:7:45.70:46,0,57	0/1:6,0:3:12.37:45,0,12	1/1:4,0:1:3.01:45,3,0	0/1:9,0:9:85.21:85,0,90	0/1:8,2:7:27.86:60,0,28	0/1:29,0:29:43.57:44,0,644	0/1:16,0:15:99:161,0,372	0/0:38,0:36:18.99:0,19,963	0/0:3,0:3:6.02:0,6,85	0/1:9,1:9:13.81:230,0,14	1/1:11,1:9:16.25:289,16,0	1/1:5,0:4:5.43:30,5,0
chr10	43595587	.	GGAAGAA	G	982.08	PASS	AB=0.981;AC=19;AF=0.380;AN=50;BaseQRankSum=8.393;DP=394;FS=60.675;HRun=0;HaplotypeScore=160.6433;InbreedingCoeff=-0.5174;MQ=34.06;MQ0=25;MQRankSum=-8.484;QD=3.33;ReadPosRankSum=-1.963;VQSLOD=0.0947;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,1:15:7.03:0,7,571	./.	./.	./.	0/0:17,0:15:2.60:0,3,101	0/0:23,2:24:18.65:0,19,1470	0/0:25,0:24:62.94:0,63,1407	0/1:30,0:11:41:84,0,41	0/1:20,1:20:14.05:14,0,1129	0/1:14,0:10:40.78:41,0,196	0/1:5,0:4:21.29:48,0,21	0/1:27,3:28:76.90:77,0,769	0/1:26,1:26:69.23:69,0,663	0/1:37,2:35:47.07:47,0,1126	0/1:6,0:3:8.70:68,0,9	0/1:4,0:4:42.23:110,0,42	0/1:6,0:5:13.79:14,0,44	0/1:5,0:2:22.66:25,0,23	0/0:5,0:1:0:0,0,0	0/0:8,0:8:0.24:0,0,169	0/1:10,0:7:6.16:6,0,80	0/1:25,0:25:99:223,0,389	0/1:14,1:14:80.68:81,0,207	0/1:30,1:29:47.65:48,0,647	0/0:2,0:2:5.88:0,6,36	0/1:11,0:9:51.57:52,0,60	0/1:10,0:7:61.76:85,0,62	1/1:6,0:4:4.07:30,4,0
chr10	43595593	.	AGAG	A	247.25	PASS	AB=0.978;AC=13;AF=0.250;AN=52;BaseQRankSum=6.061;DP=380;FS=26.480;HRun=0;HaplotypeScore=137.3377;InbreedingCoeff=-0.1582;MQ=33.95;MQ0=26;MQRankSum=-6.110;QD=1.58;ReadPosRankSum=2.328;VQSLOD=0.7068;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:15:35.63:0,36,563	0/0:2,0:1:2.96:0,3,19	./.	./.	0/1:11,3:12:46.53:47,0,107	0/0:25,0:24:63.45:0,63,1235	0/0:23,0:22:56.98:0,57,1077	0/1:28,0:11:31.07:31,0,128	0/0:19,0:18:52.41:0,52,959	0/1:13,1:10:73.32:73,0,153	0/1:5,0:4:7.99:8,0,19	0/0:27,0:27:46.57:0,47,1049	0/1:27,0:26:2.27:2,0,621	0/0:36,0:32:62.37:0,62,1223	0/1:6,0:3:4.50:26,0,4	0/1:4,0:4:37.80:38,0,55	0/1:6,0:5:4.46:4,0,38	0/0:5,0:2:5.75:0,6,30	0/0:6,0:1:3.01:0,3,35	0/0:8,0:8:6.71:0,7,176	0/0:10,0:7:10.59:0,11,55	0/1:25,0:25:11.77:12,0,580	0/0:15,0:14:31.48:0,31,368	0/0:26,0:24:32.13:0,32,763	0/0:5,0:5:2.96:0,3,19	0/1:11,0:9:84.64:85,0,112	0/1:10,0:7:13.02:13,0,107	1/1:5,1:4:3.43:45,3,0
chr10	43595605	.	GGAAGAA	G	561.11	PASS	AB=0.978;AC=20;AF=0.385;AN=52;BaseQRankSum=6.771;DP=338;FS=35.677;HRun=0;HaplotypeScore=134.9802;InbreedingCoeff=-0.1811;MQ=32.24;MQ0=22;MQRankSum=-5.410;QD=2.71;ReadPosRankSum=0.175;VQSLOD=1.1774;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:13:4.85:0,5,344	1/1:2,0:1:2.37:8,2,0	./.	./.	0/1:12,0:10:7.69:8,0,61	0/0:21,0:20:43.06:0,43,1110	0/0:20,0:19:48.51:0,49,1064	0/1:23,0:9:11.64:12,0,106	0/1:17,0:16:5.95:6,0,874	0/1:9,2:8:99:128,0,231	0/1:4,0:3:2.14:63,0,2	0/1:29,0:27:14.92:15,0,541	0/0:24,0:23:8.79:0,9,378	0/0:31,0:27:8.17:0,8,677	0/1:6,0:3:0.14:0,0,20	0/1:4,0:4:1.30:19,0,1	0/1:6,0:5:12.40:12,0,39	0/1:4,0:2:1.37:46,0,1	0/0:6,0:1:2.98:0,3,21	0/1:6,2:8:82.22:82,0,132	1/1:10,0:7:11.19:127,11,0	0/1:22,0:22:99:115,0,244	0/1:11,0:10:22.89:23,0,63	0/1:22,0:20:3.04:3,0,419	0/0:5,0:5:3.01:0,3,40	0/1:10,0:8:17.84:18,0,105	0/0:10,0:7:11.71:0,12,123	0/1:6,0:4:3.65:19,0,4
chr10	43595611	.	AGAG	A	122.55	PASS	AB=0.966;AC=11;AF=0.212;AN=52;BaseQRankSum=4.468;DP=318;FS=10.946;HRun=0;HaplotypeScore=107.6558;InbreedingCoeff=-0.1616;MQ=32.05;MQ0=21;MQRankSum=-4.804;QD=0.96;ReadPosRankSum=2.254;VQSLOD=1.4760;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:14,0:13:6.65:7,0,340	1/1:2,0:1:0.47:1,0,0	./.	./.	0/1:12,1:11:25.96:72,0,26	0/0:22,0:21:51.49:0,51,902	0/0:19,0:18:21.98:0,22,720	0/1:21,0:7:10.81:11,0,186	0/0:17,0:16:24.10:0,24,705	0/0:9,0:8:13.07:0,13,205	0/0:3,0:3:3.47:0,3,51	0/1:24,1:23:26.48:26,0,566	0/0:21,0:20:1.68:0,2,383	0/0:29,0:25:52:0,52,754	0/0:6,0:3:8.69:0,9,60	0/1:4,0:4:15.21:30,0,15	0/0:6,0:5:5.96:0,6,106	0/0:2,0:2:5.93:0,6,57	0/0:6,0:1:3:0,3,26	0/0:9,0:9:14.98:0,15,200	0/0:7,0:5:0.35:0,0,1	0/1:21,0:21:8.40:8,0,422	0/1:9,0:8:1:1,0,94	0/0:19,0:17:35.86:0,36,454	0/0:5,0:5:2.98:0,3,21	0/1:8,1:7:35.86:49,0,36	0/1:6,1:6:38.62:39,0,108	0/0:4,0:3:6:0,6,61
chr10	43596336	.	G	GA	1688.86	PASS	AB=0.789;AC=14;AF=0.250;AN=56;BaseQRankSum=13.284;DP=463;FS=85.462;HRun=0;HaplotypeScore=109.1134;InbreedingCoeff=-0.3331;MQ=50.28;MQ0=2;MQRankSum=-9.447;QD=6.62;ReadPosRankSum=5.024;VQSLOD=0.0637;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,1:18:31.72:0,32,599	0/0:11,0:11:27.06:0,27,352	0/0:12,0:9:26.65:0,27,370	0/0:10,0:9:20.84:0,21,266	0/0:23,3:26:0.19:0,0,654	0/1:11,0:11:6.85:7,0,333	0/0:13,0:13:35.95:0,36,473	0/0:13,1:13:14.96:0,15,399	0/0:20,1:21:17.47:0,17,682	0/1:25,11:36:99:387,0,732	0/1:7,11:18:99:131,0,167	0/1:5,1:6:29.93:30,0,65	0/1:10,1:11:0.77:1,0,338	0/1:8,3:11:22.93:23,0,207	0/0:16,0:16:48.16:0,48,650	0/0:14,1:15:13.31:0,13,495	0/0:10,0:10:30.10:0,30,417	0/0:5,0:5:15.02:0,15,187	0/1:6,5:11:99:202,0,202	0/1:12,15:27:99:244,0,270	0/0:20,0:20:47.08:0,47,642	0/1:9,2:10:26.83:27,0,130	0/1:14,3:17:60.79:61,0,420	0/0:17,0:17:30.08:0,30,393	0/1:14,18:32:99:325,0,384	0/1:16,4:20:99:159,0,459	0/1:11,4:15:97.10:97,0,325	0/1:22,7:29:99:145,0,633
chr10	43596877	.	T	TACAC	4018.66	PASS	AB=0.844;AC=41;AF=0.759;AN=54;BaseQRankSum=0.943;DP=492;FS=6.975;HRun=0;HaplotypeScore=124.0333;InbreedingCoeff=0.5664;MQ=68.79;MQ0=11;MQRankSum=-2.414;QD=11.61;ReadPosRankSum=-2.439;VQSLOD=2.4334;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:29:24.06:0,24,338	1/1:4,0:4:3.01:54,3,0	./.	0/0:30,0:24:3.01:0,3,47	0/1:14,0:14:0:0,0,0	0/0:16,0:14:15.03:0,15,194	0/0:14,0:20:24.05:0,24,293	1/1:24,0:24:15.70:94,16,0	0/0:21,0:23:26.98:0,27,361	1/1:16,0:16:24.06:405,24,0	1/1:15,0:13:9.01:153,9,0	1/1:10,3:19:14.15:229,14,0	1/1:5,0:10:8.50:95,8,0	1/1:8,0:10:2.91:52,3,0	1/1:12,0:12:6.01:62,6,0	1/1:18,0:19:8.43:112,8,0	1/1:23,0:26:21.07:372,21,0	1/1:23,7:36:4.91:560,5,0	1/1:16,0:17:19.28:324,19,0	1/1:6,2:16:6.02:123,6,0	1/1:12,0:16:2.73:12,3,0	0/1:4,0:8:0:0,0,0	1/1:6,4:11:6.02:142,6,0	1/1:12,8:21:27.09:636,27,0	1/1:9,0:10:6.02:119,6,0	1/1:11,0:15:15.02:221,15,0	0/1:11,0:13:38:113,0,38	1/1:4,3:8:6.02:141,6,0
chr10	43596940	.	T	TA	265.74	PASS	AB=0.909;AC=3;AF=0.054;AN=56;BaseQRankSum=-1.815;DP=364;FS=1.054;HRun=9;HaplotypeScore=52.3491;InbreedingCoeff=0.4087;MQ=67.52;MQ0=1;MQRankSum=0.518;QD=10.63;ReadPosRankSum=0.647;VQSLOD=2.0561;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:44.98:0,45,390	0/0:3,0:3:6:0,6,52	0/0:14,0:8:7.22:0,7,97	0/0:20,0:12:20.56:0,21,167	1/1:3,12:15:24.16:353,24,0	0/0:12,0:12:32.98:0,33,283	0/0:9,0:9:17.98:0,18,156	0/0:20,0:20:53.95:0,54,460	0/0:10,0:10:29.97:0,30,254	0/0:12,0:12:35.99:0,36,312	0/0:13,0:13:32.97:0,33,281	0/1:9,1:10:15.19:15,0,111	0/0:2,0:2:3:0,3,26	0/0:5,0:5:12:0,12,104	0/0:5,0:5:12:0,12,104	0/0:8,0:8:17.99:0,18,156	0/0:21,0:21:47.79:0,48,416	0/0:32,0:32:74.96:0,75,648	0/0:13,0:13:23.96:0,24,205	0/0:26,0:26:62.96:0,63,543	0/0:7,0:7:20.93:0,21,170	0/0:11,0:11:29.99:0,30,258	0/0:12,0:12:32.99:0,33,286	0/0:11,0:11:29.96:0,30,254	0/0:23,0:23:65.97:0,66,569	0/0:17,0:17:47.99:0,48,417	0/0:12,1:12:2.77:0,3,243	0/0:2,0:2:6:0,6,52
chr10	43597135	.	A	AC	754.43	PASS	AB=0.780;AC=24;AF=0.429;AN=56;BaseQRankSum=-1.409;DP=374;FS=6.825;HRun=10;HaplotypeScore=46.4909;InbreedingCoeff=0.3922;MQ=66.08;MQ0=31;MQRankSum=-3.185;QD=5.43;ReadPosRankSum=-1.840;VQSLOD=0.1846;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:9.15:0,9,179	0/0:2,0:4:4.07:0,4,12	0/0:48,0:10:15.87:0,16,117	0/0:48,0:14:3.55:0,4,65	1/1:5,0:7:5.72:29,6,0	0/0:17,0:14:21:0,21,196	0/0:16,0:14:20.96:0,21,172	1/1:13,0:13:15.11:92,15,0	0/0:5,0:4:8.79:0,9,62	1/1:3,2:3:6:56,6,0	1/1:0,2:2:3.01:32,3,0	0/1:11,3:13:11.02:11,0,124	0/0:6,0:5:11.95:0,12,94	0/0:9,0:7:11.35:0,11,71	0/0:10,0:5:8.89:0,9,53	0/1:9,0:10:24.86:46,0,25	0/0:5,0:28:46.85:0,47,138	0/1:7,11:18:22.96:139,0,23	0/1:5,4:6:12.62:70,0,13	1/1:4,1:3:5.97:51,6,0	1/1:7,0:3:2.99:23,3,0	0/1:9,0:6:4.87:5,0,34	0/0:10,0:10:22.99:0,23,185	0/0:18,0:18:35.90:0,36,294	1/1:5,5:9:11.84:96,12,0	1/1:5,4:7:13.80:114,14,0	0/1:5,7:11:6.55:142,0,7	1/1:5,2:5:3.01:32,3,0
chr10	43597975	.	C	CTTTTT	5371.94	PASS	AB=0.731;AC=35;AF=0.625;AN=56;BaseQRankSum=-0.610;DP=552;FS=2.100;HRun=13;HaplotypeScore=123.9401;InbreedingCoeff=0.5036;MQ=60.89;MQ0=9;MQRankSum=-3.769;QD=13.40;ReadPosRankSum=-5.096;VQSLOD=0.6825;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:41:37.69:0,38,1007	1/1:3,0:7:2.64:57,3,0	0/1:18,0:12:4.49:4,0,53	0/0:8,0:8:10.75:0,11,121	1/1:9,0:30:39.97:547,40,0	0/0:13,0:15:27.47:0,27,395	0/1:19,0:18:6.81:7,0,374	0/1:7,0:25:10.32:10,0,99	0/0:20,0:20:29.35:0,29,472	1/1:12,9:26:43.45:608,43,0	1/1:5,10:19:29.69:653,30,0	0/0:5,0:25:17.17:0,17,185	0/1:5,0:17:3.22:3,0,43	0/1:7,0:18:5.37:5,0,48	1/1:11,0:8:19.28:151,19,0	1/1:9,0:8:4.26:44,4,0	1/1:11,0:19:38.23:222,38,0	1/1:6,6:12:8.86:174,9,0	1/1:6,0:14:27.07:422,27,0	1/1:7,3:25:24.08:472,24,0	1/1:3,4:9:6.02:105,6,0	0/1:9,0:16:11.90:12,0,32	0/0:8,0:18:2.74:0,3,99	0/0:5,0:19:34.76:0,35,153	1/1:4,10:20:12.04:288,12,0	1/1:10,20:36:79.16:1275,79,0	1/1:11,13:31:17.75:311,18,0	0/1:6,0:11:0.30:0,0,0
chr10	43598820	.	GGCAC	G	35.59	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=2.637;DP=559;FS=0.000;HRun=0;HaplotypeScore=107.5137;InbreedingCoeff=0.5230;MQ=58.07;MQ0=6;MQRankSum=-0.535;QD=0.79;ReadPosRankSum=-2.114;VQSLOD=1.7138;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:60.10:0,60,1274	0/0:8,0:8:15.05:0,15,364	0/0:28,0:14:8.99:0,9,127	0/1:32,0:25:4.25:4,0,94	1/1:8,5:13:8.99:118,9,0	0/0:17,0:17:42.10:0,42,959	0/0:21,0:21:30.07:0,30,673	0/0:16,0:16:33.06:0,33,658	0/0:7,0:7:15.05:0,15,363	0/0:13,0:13:20.93:0,21,363	0/0:11,0:11:15.05:0,15,363	0/0:17,0:17:45.13:0,45,934	0/0:10,0:9:15.05:0,15,365	0/0:13,0:13:27.05:0,27,594	0/0:13,0:13:30.06:0,30,524	0/0:16,0:16:30.09:0,30,529	0/0:28,0:28:50.98:0,51,988	0/0:36,0:36:63.30:0,63,1805	0/0:17,0:15:18.76:0,19,276	0/0:12,0:12:21.07:0,21,507	0/0:67,0:66:99:0,126,2806	0/0:4,0:4:3.01:0,3,59	0/0:11,0:11:21.05:0,21,455	0/0:37,0:37:62.81:0,63,1467	0/0:19,0:19:42.09:0,42,899	0/0:26,0:26:54.03:0,54,1154	0/0:13,0:13:27.09:0,27,625	0/0:17,0:17:36.03:0,36,656
chr10	43599032	.	A	AT	3756.92	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=-8.547;DP=372;FS=0.000;HRun=9;HaplotypeScore=39.6038;InbreedingCoeff=0.8506;MQ=73.36;MQ0=2;MQRankSum=-0.617;QD=21.72;ReadPosRankSum=0.106;VQSLOD=3.8208;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:71.89:0,72,607	0/0:5,0:5:8.99:0,9,78	0/0:12,1:7:5.55:0,6,16	0/1:15,0:11:6.26:6,0,13	0/0:24,0:24:65.95:0,66,565	0/0:17,0:17:41.99:0,42,365	0/0:9,0:9:17.99:0,18,156	0/0:22,0:22:59.93:0,60,506	0/0:11,0:11:32.99:0,33,286	1/1:2,7:9:21.03:216,21,0	1/1:5,5:10:14.15:164,14,0	0/0:5,0:5:15:0,15,130	0/0:2,0:2:6:0,6,52	0/0:5,0:5:14.98:0,15,126	0/0:7,0:7:15:0,15,130	0/0:12,0:12:29.98:0,30,257	0/0:24,0:24:56.96:0,57,490	1/1:2,26:28:72.15:783,72,0	1/1:5,20:25:37.40:626,37,0	1/1:1,10:11:30.08:332,30,0	1/1:3,7:10:12.03:133,12,0	0/0:1,0:1:2.96:0,3,19	0/0:6,0:6:17.99:0,18,154	0/0:5,0:5:11.99:0,12,104	1/1:2,11:13:24.06:265,24,0	1/1:3,23:26:44.34:687,44,0	1/1:4,8:12:11.97:117,12,0	1/1:1,12:13:39.10:429,39,0
chr10	43599337	.	CAAA	C	237.21	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=1.788;DP=486;FS=2.807;HRun=14;HaplotypeScore=94.9254;InbreedingCoeff=0.6018;MQ=61.41;MQ0=23;MQRankSum=2.836;QD=4.24;ReadPosRankSum=0.839;VQSLOD=-0.2463;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:27:57.81:0,58,711	0/0:3,0:3:5.78:0,6,35	0/0:40,0:10:3.26:0,3,31	0/0:36,0:15:0.26:0,0,10	1/1:6,19:26:19.30:250,19,0	0/0:24,0:24:56.46:0,56,839	0/0:8,0:10:25.58:0,26,314	0/0:38,0:35:63.25:0,63,630	0/0:6,0:6:18.06:0,18,280	0/0:13,0:13:15.38:0,15,92	0/0:19,0:18:22.81:0,23,142	0/0:13,0:13:32.58:0,33,373	0/0:12,0:12:30.95:0,31,389	0/0:9,0:9:15.33:0,15,133	1/1:17,0:17:10.08:62,10,0	0/1:13,0:13:0.89:45,0,1	0/0:23,0:24:51.68:0,52,449	0/0:21,0:20:9.86:0,10,48	0/0:25,0:19:20:0,20,116	0/0:10,0:10:12.41:0,12,77	0/0:6,0:4:5.88:0,6,56	0/0:10,0:10:17.99:0,18,190	0/0:12,0:11:29.06:0,29,404	0/0:14,0:14:24.90:0,25,268	0/0:14,0:13:8.78:0,9,35	0/0:21,0:20:15.24:0,15,108	0/0:15,0:15:7.32:0,7,43	0/0:5,0:4:0.89:0,1,2
chr10	43599352	.	CAA	C	1196.87	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=1.199;DP=478;FS=18.061;HRun=14;HaplotypeScore=81.4955;InbreedingCoeff=0.7657;MQ=61.72;MQ0=22;MQRankSum=4.437;QD=11.51;ReadPosRankSum=-0.376;VQSLOD=0.6643;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:63.60:0,64,739	0/0:3,0:3:3.01:0,3,41	0/0:40,0:13:17.42:0,17,120	0/0:35,0:16:2.93:0,3,49	0/0:24,0:24:23.27:0,23,215	0/0:21,0:22:47.99:0,48,569	0/0:13,0:13:30.83:0,31,336	0/0:36,0:35:58.87:0,59,503	0/0:8,0:8:21.02:0,21,226	1/1:1,9:10:23.94:235,24,0	1/1:3,9:11:9.44:127,9,0	0/0:15,0:15:34.35:0,34,292	0/0:12,0:12:32.19:0,32,329	0/0:9,0:9:22.78:0,23,203	0/0:16,0:17:4.69:0,5,26	0/0:16,0:16:8.57:0,9,87	0/0:27,0:27:44.94:0,45,471	1/1:7,15:21:0.48:25,0,0	1/1:11,16:22:37.47:430,37,0	1/1:2,7:9:14.99:139,15,0	0/0:3,2:3:0:0,0,0	0/0:10,0:10:21.82:0,22,238	0/0:13,0:12:32.85:0,33,302	0/0:13,0:13:21.52:0,22,268	0/0:4,4:7:0:0,0,0	1/1:7,13:19:20.74:296,21,0	0/0:10,5:15:1.55:0,2,5	1/1:4,0:4:12.02:121,12,0
chr10	43601051	.	TTG	T	2053.92	PASS	AB=0.995;AC=25;AF=0.446;AN=56;BaseQRankSum=-2.390;DP=710;FS=11.572;HRun=0;HaplotypeScore=185.9505;InbreedingCoeff=-0.2633;MQ=64.99;MQ0=0;MQRankSum=1.306;QD=3.93;ReadPosRankSum=-5.659;VQSLOD=0.0735;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,126,1893	0/1:7,0:7:26.87:27,0,33	0/0:20,0:16:9.77:0,10,528	0/0:24,0:22:41.76:0,42,828	0/0:31,0:31:93.09:0,93,1364	0/0:25,0:25:75.13:0,75,1133	0/0:25,0:25:75.20:0,75,1130	0/1:25,1:26:26.43:233,0,26	0/0:17,0:17:51.15:0,51,778	0/1:42,2:44:28.37:238,0,28	0/1:19,0:18:12.07:116,0,12	0/1:23,0:23:10.23:81,0,10	1/1:22,1:23:0.45:112,0,0	0/1:32,0:30:18.98:58,0,19	0/1:28,0:28:39.21:39,0,61	0/1:33,0:33:47.34:47,0,152	1/1:19,4:23:30.20:360,30,0	0/1:17,0:16:30.45:44,0,30	0/1:34,0:33:43.02:142,0,43	0/1:32,0:32:37.46:37,0,85	0/1:15,0:15:6:146,0,6	1/1:22,0:22:2.88:30,3,0	0/1:23,0:23:16.59:17,0,49	1/1:22,0:22:8.86:112,9,0	0/1:27,0:27:29.83:81,0,30	0/1:25,0:25:19.31:135,0,19	0/1:32,0:32:60.16:162,0,60	0/1:15,0:15:4.68:5,0,47
chr10	43601052	.	TG	T	6553.30	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=6.716;DP=709;FS=22.551;HRun=1;HaplotypeScore=162.5221;InbreedingCoeff=0.9904;MQ=65.04;MQ0=0;MQRankSum=-5.671;QD=12.58;ReadPosRankSum=-5.467;VQSLOD=1.0599;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,125,1485	1/1:6,2:8:14.01:143,14,0	0/0:20,0:16:16.93:0,17,442	0/0:24,0:22:52.77:0,53,665	0/0:31,0:31:93.07:0,93,1090	0/0:25,0:25:75.11:0,75,897	0/0:25,0:25:75.17:0,75,894	1/1:18,8:26:64.68:585,65,0	0/0:17,0:17:51.08:0,51,594	1/1:44,0:44:99:629,101,0	1/1:19,0:18:44.23:260,44,0	1/1:22,1:23:49.59:295,50,0	1/1:21,1:22:42.75:293,43,0	1/1:31,1:30:53.11:297,53,0	1/1:28,1:29:15.75:131,16,0	1/1:34,0:34:21.10:183,21,0	1/1:20,3:23:68.43:687,68,0	1/1:17,0:16:33.24:185,33,0	1/1:33,0:32:57.95:348,58,0	1/1:32,0:32:67.36:402,67,0	1/1:14,1:15:29.06:218,29,0	1/1:21,0:21:49.21:287,49,0	1/1:22,1:23:41.27:229,41,0	1/1:22,0:22:31:216,31,0	1/1:27,0:27:58.43:322,58,0	1/1:24,0:24:49.31:322,49,0	1/1:32,0:32:68.04:420,68,0	1/1:15,0:15:21.89:102,22,0
chr10	43603348	.	GC	G	1892.52	PASS	AB=0.528;AC=3;AF=0.058;AN=52;BaseQRankSum=2.095;DP=507;FS=2.630;HRun=1;HaplotypeScore=77.5938;InbreedingCoeff=0.7917;MQ=48.29;MQ0=32;MQRankSum=4.148;QD=28.67;ReadPosRankSum=2.661;VQSLOD=3.6159;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:25:57.17:0,57,878	0/0:15,0:13:33.11:0,33,525	./.	./.	0/0:23,0:23:51.06:0,51,748	0/0:18,0:17:39.13:0,39,614	0/0:16,0:14:36.11:0,36,550	0/0:18,0:18:42.14:0,42,653	0/0:22,0:20:57.19:0,57,911	0/0:19,0:17:48.16:0,48,758	0/0:13,0:13:24.08:0,24,377	0/0:25,0:22:57.19:0,57,907	0/0:24,0:23:45.08:0,45,695	0/0:16,0:16:36.05:0,36,572	0/1:4,34:34:2.16:1122,0,2	1/1:3,25:26:21.27:874,21,0	0/0:31,0:28:75.19:0,75,1137	0/0:23,0:19:51.15:0,51,789	0/0:12,0:11:30.10:0,30,466	0/0:16,0:16:21.06:0,21,335	0/0:17,0:16:33.11:0,33,516	0/0:17,0:17:41.96:0,42,647	0/0:16,0:16:36.11:0,36,551	0/0:19,0:16:33.11:0,33,523	0/0:11,0:11:18.06:0,18,287	0/0:16,0:13:30.06:0,30,451	0/0:18,0:16:36.12:0,36,575	0/0:10,0:10:27.02:0,27,377
chr10	43603391	.	AAAAACAAAACAAAAC	A	7257.47	PASS	AB=0.694;AC=26;AF=0.464;AN=56;BaseQRankSum=10.429;DP=613;FS=7.765;HRun=0;HaplotypeScore=228.7010;InbreedingCoeff=0.4484;MQ=42.73;MQ0=63;MQRankSum=-8.457;QD=22.82;ReadPosRankSum=0.542;VQSLOD=2.1309;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:34:69.22:0,69,4074	1/1:10,0:15:20.79:733,21,0	0/0:9,0:1:3.01:0,3,115	0/0:19,0:4:7.27:0,7,266	0/0:32,0:32:63.22:0,63,4036	0/0:24,0:22:57.66:0,58,3351	0/0:16,0:13:18.06:0,18,1105	0/0:32,0:28:36.03:0,36,584	0/0:26,0:24:60.21:0,60,4115	0/1:17,12:23:99:1379,0,262	1/1:5,13:18:26.96:550,27,0	0/1:13,0:17:18.99:19,0,66	0/1:10,0:24:21.39:21,0,201	0/1:7,0:16:14.08:14,0,66	0/0:23,0:26:51.18:0,51,2523	0/0:15,0:21:42.07:0,42,2094	1/1:22,0:23:15.05:454,15,0	0/0:15,5:16:0:0,0,0	1/1:20,3:18:9.01:242,9,0	1/1:14,12:26:30.10:1102,30,0	0/1:14,5:18:87.58:200,0,88	1/1:6,0:14:10.22:28,10,0	0/1:11,0:20:9.19:9,0,176	0/0:16,0:22:1.15:0,1,254	1/1:8,9:17:18.06:718,18,0	1/1:10,8:16:24.06:741,24,0	1/1:11,10:20:24.08:921,24,0	1/1:2,2:4:3.01:125,3,0
chr10	43603585	.	C	CA	4959.63	PASS	AB=0.582;AC=29;AF=0.518;AN=56;BaseQRankSum=-9.904;DP=535;FS=0.778;HRun=11;HaplotypeScore=67.1007;InbreedingCoeff=0.6892;MQ=65.43;MQ0=0;MQRankSum=-1.001;QD=16.64;ReadPosRankSum=-1.759;VQSLOD=5.0872;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:25:60.63:0,61,452	0/0:0,0:8:14.26:0,14,41	0/0:7,0:9:15.19:0,15,98	0/0:10,0:9:12.85:0,13,77	0/0:15,1:17:10.44:0,10,254	0/0:19,0:18:52.79:0,53,396	0/0:21,0:21:44.81:0,45,348	0/0:6,0:35:56.34:0,56,163	0/0:22,0:22:47.75:0,48,371	1/1:9,15:24:18.84:373,19,0	1/1:6,7:13:14.99:141,15,0	1/1:3,27:30:33.88:525,34,0	1/1:2,16:19:42.03:412,42,0	1/1:2,13:15:24.05:244,24,0	0/0:1,0:28:52.46:0,52,152	0/0:6,0:25:30.52:0,31,88	0/0:3,0:17:28.51:0,29,82	1/1:4,11:16:3.65:204,4,0	1/1:8,27:37:5.31:708,5,0	1/1:4,17:22:41.84:389,42,0	1/1:2,8:10:3.82:220,4,0	1/1:3,12:15:9.83:281,10,0	0/1:4,14:18:4.34:323,0,4	1/1:5,14:19:0.81:190,1,0	1/1:0,11:11:30.02:293,30,0	0/1:6,15:21:23.38:322,0,23	1/1:5,15:22:13.60:298,14,0	0/1:2,1:6:14.38:36,0,14
chr10	43607640	.	A	AAAACAAAC	2163.73	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-5.499;DP=657;FS=7.694;HRun=0;HaplotypeScore=161.5185;InbreedingCoeff=0.9759;MQ=63.18;MQ0=1;MQRankSum=-6.551;QD=45.08;ReadPosRankSum=0.405;VQSLOD=3.0107;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:78.16:0,78,1638	0/0:7,0:7:12.02:0,12,205	0/0:18,0:14:21.02:0,21,382	0/0:19,0:17:18.18:0,18,489	0/0:24,0:24:51.14:0,51,1146	0/0:25,0:24:60.19:0,60,1392	0/0:22,0:22:48.10:0,48,944	0/0:33,0:33:39.12:0,39,840	0/0:31,0:31:66.23:0,66,1657	0/0:26,0:26:57.18:0,57,1318	0/0:25,0:25:65.86:0,66,1485	0/0:19,0:19:45.15:0,45,1079	0/0:21,0:21:51.18:0,51,1302	0/0:13,0:13:30.09:0,30,715	1/1:7,17:29:30.10:1171,30,0	1/1:4,12:19:26.90:1114,27,0	0/0:35,0:35:69.18:0,69,1422	0/0:12,0:12:24.08:0,24,612	0/0:31,0:30:36.10:0,36,771	0/0:29,0:29:62.40:0,62,1362	0/0:26,0:26:60.18:0,60,1406	0/0:19,0:19:45.05:0,45,789	0/0:23,0:23:57.09:0,57,1267	0/0:21,0:21:49.98:0,50,1195	0/0:17,0:17:42.13:0,42,972	0/0:24,0:24:54.19:0,54,1317	0/0:39,0:39:81.26:0,81,1963	0/0:12,0:12:30.10:0,30,760
chr10	43607677	.	A	AAAACC	3573.47	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-7.298;DP=740;FS=8.766;HRun=0;HaplotypeScore=146.6861;InbreedingCoeff=0.9886;MQ=64.92;MQ0=2;MQRankSum=-4.003;QD=47.02;ReadPosRankSum=-3.537;VQSLOD=2.8162;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:75.26:0,75,1365	1/1:3,2:6:12.04:332,12,0	0/0:39,0:34:70.45:0,70,1118	0/0:45,0:38:37.39:0,37,658	0/0:27,0:27:75.23:0,75,1307	0/0:28,0:28:63.18:0,63,1126	0/0:23,0:23:51.15:0,51,899	1/1:18,17:37:72.21:1507,72,0	0/0:32,0:32:72.23:0,72,1253	0/0:21,0:21:42.14:0,42,765	0/0:29,0:29:66.19:0,66,1130	0/0:23,0:23:60.20:0,60,1098	0/0:24,0:24:63.20:0,63,1101	0/0:13,0:13:36.11:0,36,612	0/0:22,0:22:36.12:0,36,676	0/0:28,0:28:59.93:0,60,1072	1/1:10,23:33:60.21:1734,60,0	0/0:21,0:21:51.17:0,51,935	0/0:26,0:26:51.17:0,51,908	0/0:33,0:33:87.30:0,87,1610	0/0:30,0:30:69.16:0,69,1109	0/0:24,0:24:60.19:0,60,1099	0/0:23,0:23:54.18:0,54,1004	0/0:22,0:22:45.15:0,45,797	0/0:19,0:19:51.17:0,51,942	0/0:31,0:31:72.23:0,72,1284	0/0:32,0:32:69.19:0,69,1238	0/0:15,0:15:30.10:0,30,555
chr10	43611466	.	AG	A	138.47	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.014;DP=409;FS=19.513;HRun=8;HaplotypeScore=39.7852;InbreedingCoeff=0.9586;MQ=75.36;MQ0=0;MQRankSum=-0.164;QD=12.59;ReadPosRankSum=0.896;VQSLOD=1.1867;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:36.09:0,36,420	0/0:7,0:7:18.03:0,18,203	0/0:14,0:14:33.04:0,33,364	0/0:9,0:9:17.79:0,18,187	1/1:3,8:11:24.04:232,24,0	0/0:19,0:19:45.13:0,45,531	0/0:12,0:12:33.10:0,33,399	0/0:15,0:15:36.08:0,36,401	0/0:10,0:10:27.07:0,27,316	0/0:26,0:26:63.19:0,63,752	0/0:6,0:6:18.06:0,18,217	0/0:18,0:18:51.15:0,51,605	0/0:7,0:7:18.04:0,18,206	0/0:19,0:19:51.14:0,51,604	0/0:17,0:17:42.13:0,42,507	0/0:14,0:14:39.12:0,39,469	0/0:21,0:21:57.17:0,57,687	0/0:23,0:23:60.18:0,60,725	0/0:15,2:16:42.12:0,42,494	0/0:12,0:12:33.05:0,33,370	0/0:15,0:15:45.14:0,45,542	0/0:10,0:10:24.06:0,24,277	0/0:9,0:9:24.07:0,24,290	0/0:10,0:10:24.07:0,24,290	0/0:17,0:17:48.14:0,48,569	0/0:21,0:21:45.14:0,45,543	0/0:20,0:20:57.15:0,57,664	0/0:14,0:14:39.12:0,39,471
chr10	43611576	.	CA	C	694.97	PASS	AB=0.893;AC=16;AF=0.286;AN=56;BaseQRankSum=10.449;DP=316;FS=0.000;HRun=1;HaplotypeScore=55.8513;InbreedingCoeff=0.6248;MQ=75.76;MQ0=1;MQRankSum=-3.687;QD=5.26;ReadPosRankSum=4.758;VQSLOD=0.5684;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:32.49:0,32,377	0/0:2,0:2:2.96:0,3,19	0/0:12,0:11:10.41:0,10,318	0/0:17,0:14:29.26:0,29,459	0/0:8,0:8:14.75:0,15,200	0/0:14,0:14:42.06:0,42,517	0/0:16,0:16:48.11:0,48,639	0/0:14,0:14:42.05:0,42,501	0/0:10,0:10:30.02:0,30,344	0/1:5,3:8:36.98:42,0,37	1/1:9,0:9:17.37:69,17,0	0/0:16,0:16:44.32:0,44,556	0/0:10,0:10:27.07:0,27,366	0/0:9,0:9:24.06:0,24,326	0/0:9,0:9:27.06:0,27,353	0/0:4,0:4:9.03:0,9,126	0/0:10,0:10:27.09:0,27,379	1/1:17,0:17:17.11:133,17,0	0/1:22,0:22:48.51:49,0,128	0/1:10,0:10:0.23:58,0,0	1/1:28,1:28:23.95:170,24,0	0/0:2,0:2:6.02:0,6,80	0/0:3,0:3:6.01:0,6,69	0/0:16,0:16:48.10:0,48,623	0/1:9,2:10:1.85:107,0,2	1/1:9,0:9:14.47:63,14,0	1/1:11,1:12:8.01:142,8,0	1/1:5,0:5:5.91:44,6,0
chr10	43611577	.	AC	A	2660.56	PASS	AB=1.000;AC=21;AF=0.389;AN=54;BaseQRankSum=5.020;DP=312;FS=1.613;HRun=7;HaplotypeScore=48.6019;InbreedingCoeff=0.8451;MQ=75.85;MQ0=1;MQRankSum=-2.490;QD=18.87;ReadPosRankSum=1.614;VQSLOD=3.2212;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:11,1:12:17.11:0,17,255	./.	0/1:11,0:10:14.80:15,0,125	0/0:18,0:14:33.06:0,33,390	0/0:8,0:8:14.73:0,15,162	0/0:14,0:14:27.09:0,27,340	0/0:15,0:15:42.13:0,42,528	0/0:14,0:14:20.21:0,20,265	0/0:10,0:10:18.06:0,18,226	1/1:5,3:8:18.04:183,18,0	1/1:0,9:9:21.05:214,21,0	0/0:17,0:17:39.11:0,39,470	0/0:10,0:10:24.08:0,24,298	0/0:9,0:9:24.08:0,24,302	0/0:8,0:8:21.07:0,21,263	0/0:4,0:4:9.03:0,9,113	0/0:10,0:10:27.09:0,27,338	1/1:3,14:17:42.08:420,42,0	1/1:6,16:22:13.44:452,13,0	1/1:1,9:10:18.04:181,18,0	1/1:4,24:28:54.09:548,54,0	0/0:2,0:2:6.02:0,6,75	0/0:2,0:2:3.01:0,3,37	0/0:16,0:16:39.08:0,39,471	1/1:3,8:10:21.04:212,21,0	1/1:0,9:9:27:256,27,0	1/1:3,8:11:33.06:328,33,0	1/1:0,5:5:6.01:61,6,0
chr10	43611584	.	CA	C	811.40	PASS	AB=1.000;AC=19;AF=0.352;AN=54;BaseQRankSum=8.854;DP=291;FS=6.360;HRun=1;HaplotypeScore=57.9508;InbreedingCoeff=0.5051;MQ=74.10;MQ0=2;MQRankSum=-1.606;QD=5.41;ReadPosRankSum=3.412;VQSLOD=0.8213;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:11,1:12:0.85:0,1,228	./.	0/1:11,0:8:20.16:20,0,134	0/0:18,2:15:38.06:0,38,414	0/0:6,0:6:8.72:0,9,98	0/0:9,0:9:27.08:0,27,332	0/0:14,0:14:42.13:0,42,524	0/1:10,0:10:2.29:2,0,216	0/0:6,0:6:18.06:0,18,224	0/1:7,0:7:7.83:44,0,8	1/1:10,0:10:4.22:50,4,0	0/0:13,0:13:38.86:0,39,412	0/0:10,0:10:26.94:0,27,280	0/0:10,0:10:26.97:0,27,302	0/0:7,0:7:21.03:0,21,234	0/0:4,0:4:9.01:0,9,91	0/0:11,0:11:27.01:0,27,301	1/1:15,1:16:36.89:212,37,0	0/1:18,0:18:13.51:50,0,14	1/1:9,1:10:15.89:83,16,0	0/1:31,0:31:63.02:120,0,63	0/0:2,0:2:6.02:0,6,73	0/0:3,0:3:5.99:0,6,49	0/0:13,0:13:36.04:0,36,412	1/1:11,0:10:22.92:146,23,0	1/1:9,0:9:14.85:67,15,0	1/1:10,2:12:18.59:183,19,0	1/1:5,0:5:4.99:18,5,0
chr10	43611605	.	C	CGTGTGT	3139.64	PASS	AB=1.000;AC=30;AF=0.600;AN=50;BaseQRankSum=1.857;DP=342;FS=17.709;HRun=0;HaplotypeScore=110.1653;InbreedingCoeff=0.7144;MQ=59.21;MQ0=8;MQRankSum=-3.260;QD=15.86;ReadPosRankSum=-4.019;VQSLOD=0.7203;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:15:18.06:0,18,327	1/1:1,0:1:3.01:50,3,0	./.	./.	0/1:6,0:6:0:0,0,0	0/0:8,0:8:6.45:0,6,180	0/0:15,0:15:21.06:0,21,394	1/1:13,0:13:14.95:221,15,0	0/0:8,0:8:15.03:0,15,257	1/1:7,1:8:18.06:463,18,0	1/1:12,1:14:11:277,11,0	0/0:12,0:12:17.46:0,17,251	0/1:6,0:6:0:0,0,0	0/0:11,0:11:8.81:0,9,128	1/1:11,0:11:4.34:72,4,0	1/1:1,0:3:3.01:78,3,0	1/1:12,0:17:4.57:52,5,0	1/1:13,1:14:6.01:96,6,0	1/1:14,0:13:3.01:63,3,0	./.	1/1:40,2:40:29.90:564,30,0	0/0:4,0:4:9.03:0,9,161	0/0:7,0:7:12.35:0,12,181	0/0:11,0:11:4.31:0,4,177	1/1:9,2:12:12.04:259,12,0	1/1:10,2:12:19.21:515,19,0	1/1:16,1:16:18.06:367,18,0	1/1:7,0:7:11.62:238,12,0
chr10	43611740	.	G	GT	1270.53	PASS	AB=0.972;AC=22;AF=0.407;AN=54;BaseQRankSum=-0.766;DP=337;FS=1.150;HRun=10;HaplotypeScore=66.7653;InbreedingCoeff=0.7135;MQ=68.13;MQ0=4;MQRankSum=1.833;QD=8.47;ReadPosRankSum=0.192;VQSLOD=2.0344;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:74.91:0,75,616	1/1:0,2:2:6.02:64,6,0	0/1:35,0:17:28.73:29,0,108	0/1:16,0:8:4.82:5,0,24	0/0:4,0:4:8.95:0,9,69	0/0:11,0:11:29.94:0,30,244	0/0:9,0:9:20.97:0,21,172	1/1:6,17:23:35.32:492,35,0	0/0:9,0:9:20.97:0,21,172	0/0:9,0:9:14.93:0,15,60	0/0:13,0:13:22.03:0,22,73	1/1:4,0:12:25.70:130,26,0	1/1:5,1:10:14.28:86,14,0	1/1:2,0:4:2.84:14,3,0	1/1:5,0:8:11.48:61,11,0	1/1:3,0:6:5.52:28,6,0	1/1:2,18:21:48.09:499,48,0	0/0:10,0:9:13.84:0,14,48	0/0:11,0:10:14.76:0,15,53	0/0:12,0:11:20.34:0,20,72	0/0:14,0:14:7.24:0,7,20	./.	1/1:0,0:3:5.68:28,6,0	1/1:4,0:7:5.72:29,6,0	0/0:19,0:19:32.13:0,32,98	0/0:18,0:18:33.61:0,34,127	0/0:9,0:9:14.75:0,15,40	0/0:9,0:9:5.45:0,5,15
chr10	43611750	.	TA	T	3765.62	PASS	AC=40;AF=0.741;AN=54;BaseQRankSum=6.245;DP=312;FS=12.138;HRun=3;HaplotypeScore=56.8752;InbreedingCoeff=0.7759;MQ=69.09;MQ0=4;MQRankSum=-4.558;QD=19.31;ReadPosRankSum=1.378;VQSLOD=2.2168;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:78.19:0,78,1017	1/1:2,0:2:5.42:23,5,0	0/0:36,0:18:11.85:0,12,168	0/0:17,0:9:3.16:0,3,45	0/0:4,0:4:9.02:0,9,105	0/0:12,0:12:33.10:0,33,425	0/0:8,0:8:24.07:0,24,306	1/1:21,0:20:39.30:242,39,0	0/0:10,0:10:27.05:0,27,314	1/1:5,4:9:24:250,24,0	1/1:3,10:12:36.03:401,36,0	1/1:10,0:9:19.16:80,19,0	1/1:7,0:7:1.41:29,1,0	1/1:2,0:2:2.22:7,2,0	1/1:7,0:6:6.06:16,6,0	1/1:5,0:5:4.80:19,5,0	1/1:19,0:19:37.37:153,37,0	1/1:2,8:9:24:261,24,0	1/1:5,5:10:23.98:242,24,0	1/1:3,8:10:30.07:344,30,0	1/1:1,11:12:17.90:181,18,0	./.	1/1:4,0:4:7.78:42,8,0	1/1:4,0:4:4.71:19,5,0	1/1:2,15:17:51.04:587,51,0	1/1:4,12:16:48:514,48,0	1/1:1,8:9:13.81:245,14,0	1/1:0,6:6:9.03:110,9,0
chr10	43611764	.	G	GATTT	3929.88	PASS	AB=0.833;AC=21;AF=0.420;AN=50;BaseQRankSum=2.662;DP=318;FS=0.000;HRun=0;HaplotypeScore=67.3072;InbreedingCoeff=0.8453;MQ=52.07;MQ0=15;MQRankSum=-7.909;QD=33.88;ReadPosRankSum=0.863;VQSLOD=3.0417;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:75.21:0,75,1273	0/0:3,0:3:9.03:0,9,156	0/0:29,0:11:8.87:0,9,124	0/0:22,0:5:5.85:0,6,75	0/0:4,0:4:9.03:0,9,156	0/0:11,0:9:24.08:0,24,417	0/0:9,0:9:9.03:0,9,156	0/0:27,0:23:51.17:0,51,886	0/0:10,0:10:24.08:0,24,417	1/1:4,4:8:12.04:304,12,0	1/1:7,8:14:18.05:371,18,0	0/0:9,0:8:24.07:0,24,390	0/0:7,0:7:12.04:0,12,208	./.	./.	0/1:4,1:5:0:0,0,0	0/0:19,0:19:39.11:0,39,647	1/1:7,6:9:9.03:228,9,0	1/1:7,4:10:12.04:304,12,0	1/1:6,3:10:15.05:322,15,0	1/1:4,3:6:12.04:237,12,0	./.	0/0:8,0:8:15.05:0,15,260	0/0:5,0:5:8.92:0,9,156	1/1:5,14:18:36.12:845,36,0	1/1:5,11:14:36.10:859,36,0	1/1:2,6:9:18.06:435,18,0	1/1:3,0:3:3:25,3,0
chr10	43611984	.	T	TGG	354.26	PASS	AB=0.947;AC=12;AF=0.214;AN=56;BaseQRankSum=0.616;DP=454;FS=28.752;HRun=0;HaplotypeScore=52.7440;InbreedingCoeff=-0.1328;MQ=45.43;MQ0=73;MQRankSum=1.047;QD=2.11;ReadPosRankSum=-0.872;VQSLOD=0.0242;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:18:46.89:0,47,551	1/1:2,0:2:2.60:10,3,0	0/1:30,0:2:3.95:6,0,4	0/0:36,0:7:11.89:0,12,119	0/0:15,0:12:36.10:0,36,446	0/0:23,0:17:42.10:0,42,492	0/0:14,0:6:17.63:0,18,208	0/0:29,0:11:32.96:0,33,357	0/0:12,0:8:12.03:0,12,149	0/1:11,0:6:34.62:35,0,93	0/0:12,0:10:1.16:0,1,107	0/0:13,0:9:15.03:0,15,166	0/0:12,0:9:5.98:0,6,56	0/0:7,0:3:9.01:0,9,93	0/0:9,0:8:5.76:0,6,75	0/0:14,0:13:26.99:0,27,271	0/0:27,0:25:0.33:0,0,231	0/1:17,1:16:42.10:42,0,126	0/1:12,2:7:51.54:52,0,80	0/1:15,0:11:16.29:16,0,125	0/1:13,0:12:57.41:57,0,76	0/0:12,0:11:19.96:0,20,190	0/0:14,0:13:31.49:0,31,293	0/0:11,0:7:1.99:0,2,5	0/1:6,0:7:16.95:38,0,17	0/1:26,1:22:99:127,0,223	0/1:12,1:9:22.75:53,0,23	0/1:16,1:10:58.77:59,0,73
chr10	43611985	.	T	TGG	297.12	PASS	AB=0.951;AC=12;AF=0.214;AN=56;BaseQRankSum=-0.279;DP=444;FS=19.589;HRun=0;HaplotypeScore=52.7522;InbreedingCoeff=-0.1147;MQ=44.04;MQ0=73;MQRankSum=0.517;QD=1.85;ReadPosRankSum=-1.655;VQSLOD=-0.6161;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:18:47.87:0,48,542	1/1:2,0:2:2.99:23,3,0	0/0:25,0:2:1.52:0,2,25	0/0:31,0:6:8.92:0,9,85	0/0:15,0:12:36.10:0,36,448	0/0:24,0:18:42.11:0,42,498	0/0:14,0:6:17.89:0,18,221	0/0:29,0:11:32.78:0,33,354	0/0:13,0:9:15.03:0,15,177	0/1:9,3:7:74.97:75,0,95	0/0:11,0:9:11.83:0,12,136	0/0:14,0:10:13.85:0,14,137	0/0:13,0:10:5.97:0,6,55	0/0:7,0:3:9.01:0,9,93	0/0:9,0:8:6.02:0,6,74	0/0:13,0:12:24.03:0,24,250	0/1:26,0:24:22.98:23,0,207	0/1:18,1:17:21.55:22,0,123	0/1:15,0:7:10.96:11,0,88	0/1:14,0:10:26.81:27,0,92	0/1:11,1:10:13.01:13,0,104	0/0:12,0:11:17.66:0,18,155	0/0:15,0:14:24.66:0,25,210	0/0:11,0:7:2.70:0,3,12	0/1:6,0:6:12.62:65,0,13	0/1:25,1:21:62.65:63,0,229	0/1:12,1:9:4.13:21,0,4	0/1:15,1:9:64.48:99,0,64
chr10	43611986	.	T	TGG	135.87	PASS	AB=0.911;AC=7;AF=0.125;AN=56;BaseQRankSum=0.495;DP=440;FS=13.463;HRun=0;HaplotypeScore=51.6100;InbreedingCoeff=0.0106;MQ=42.41;MQ0=73;MQRankSum=-0.233;QD=1.49;ReadPosRankSum=-1.693;VQSLOD=-0.3278;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:18:44.92:0,45,519	1/1:1,0:2:3.01:43,3,0	0/0:25,0:2:5.75:0,6,54	0/0:29,0:5:5.75:0,6,50	0/0:16,0:13:36.09:0,36,445	0/0:24,0:18:45.10:0,45,520	0/0:15,0:7:15.93:0,16,206	0/0:29,0:11:28.98:0,29,297	0/0:13,0:9:18.03:0,18,206	0/0:12,0:7:2.55:0,3,118	0/0:10,0:8:17.79:0,18,158	0/0:13,0:9:14.01:0,14,124	0/0:13,0:10:5.98:0,6,57	0/0:7,0:3:8.93:0,9,75	0/0:9,0:8:6.02:0,6,68	0/0:12,0:11:24.02:0,24,242	0/1:25,2:25:54.01:54,0,200	0/0:19,0:17:6.51:0,7,132	0/0:15,0:7:14.67:0,15,114	0/0:13,0:9:11.69:0,12,110	0/0:12,0:10:2.66:0,3,122	0/0:11,0:10:16.91:0,17,113	0/0:14,0:13:21.09:0,21,174	0/0:11,0:7:2.88:0,3,17	0/1:3,2:5:11.23:78,0,11	0/1:26,1:22:18.67:19,0,350	0/1:13,0:9:5.74:6,0,31	0/1:16,0:10:56.30:56,0,56
chr10	43611989	.	TTTTG	T	310.79	PASS	AB=0.995;AC=22;AF=0.393;AN=56;BaseQRankSum=5.623;DP=429;FS=52.009;HRun=0;HaplotypeScore=55.0269;InbreedingCoeff=-0.1535;MQ=40.88;MQ0=69;MQRankSum=1.077;QD=1.30;ReadPosRankSum=2.375;VQSLOD=-0.1584;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:19:45.88:0,46,467	1/1:2,0:2:2.04:6,2,0	0/0:17,0:2:5.73:0,6,35	0/0:28,0:3:3.01:0,3,40	0/0:17,0:14:9.40:0,9,252	0/0:24,0:18:28.68:0,29,346	0/1:15,0:8:8.39:8,0,109	0/1:28,0:10:13.89:14,0,98	0/1:12,0:9:8.56:9,0,106	0/0:12,0:7:17.52:0,18,110	0/0:12,0:10:10.61:0,11,121	0/1:11,0:8:7.22:7,0,53	0/1:13,0:10:21.81:26,0,22	0/1:6,0:3:14.77:31,0,15	1/1:8,0:7:0.08:1,0,0	0/1:11,1:11:2.93:107,0,3	0/1:26,0:24:96.94:97,0,100	0/1:22,0:20:22.32:22,0,121	0/1:17,0:9:14.43:14,0,92	0/1:14,0:10:1.79:2,0,79	0/0:13,0:11:18.21:0,18,118	1/1:9,0:8:2.62:21,3,0	0/1:11,0:10:32.15:32,0,33	1/1:5,6:7:2.64:29,3,0	0/1:6,0:6:6.21:6,0,36	0/0:27,0:22:36.64:0,37,344	0/0:13,0:9:8.67:0,9,53	0/1:16,0:9:26.59:27,0,31
chr10	43612075	.	AC	A	5956.91	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=11.660;DP=528;FS=1.623;HRun=4;HaplotypeScore=52.0667;InbreedingCoeff=0.9173;MQ=61.03;MQ0=6;MQRankSum=-1.708;QD=28.92;ReadPosRankSum=2.219;VQSLOD=4.7152;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,117,1633	0/0:6,0:6:18.06:0,18,249	0/0:6,0:3:9.03:0,9,120	0/1:13,0:9:13.51:14,0,103	0/0:11,0:11:33.10:0,33,444	0/0:22,0:22:63.20:0,63,862	0/0:25,0:25:71.94:0,72,966	0/0:23,0:21:59.92:0,60,741	0/0:16,0:16:48.14:0,48,640	1/1:0,21:21:60.16:705,60,0	1/1:1,16:16:39.12:468,39,0	0/0:15,0:15:41.97:0,42,559	0/0:20,0:19:53.85:0,54,721	0/0:12,0:12:33.11:0,33,461	0/0:15,0:15:45.15:0,45,629	0/0:23,0:23:59.96:0,60,818	0/0:33,0:33:90.14:0,90,1185	1/1:1,27:28:60.18:719,60,0	1/1:3,16:16:48.15:576,48,0	1/1:0,18:18:54.17:646,54,0	1/1:0,29:29:72.22:863,72,0	0/0:13,0:13:36.12:0,36,491	0/0:19,0:19:57.19:0,57,795	0/0:24,0:24:72.23:0,72,987	1/1:1,12:13:39.12:464,39,0	1/1:0,20:19:54.16:641,54,0	1/1:0,17:16:45.14:538,45,0	1/1:1,10:11:27.08:324,27,0
chr10	43612521	.	A	AT	3595.14	PASS	AB=1.000;AC=27;AF=0.482;AN=56;BaseQRankSum=8.112;DP=419;FS=5.140;HRun=7;HaplotypeScore=74.9462;InbreedingCoeff=0.7484;MQ=73.30;MQ0=4;MQRankSum=-5.242;QD=17.54;ReadPosRankSum=1.321;VQSLOD=3.5508;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:96.05:0,96,896	1/1:6,0:6:10.92:50,11,0	0/0:25,0:14:18.32:0,18,200	0/1:27,0:18:9.47:9,0,138	0/0:26,0:26:66.07:0,66,625	0/0:15,0:15:39.06:0,39,375	0/0:19,0:19:41.74:0,42,404	0/0:25,0:25:60.04:0,60,555	0/0:9,0:9:27.04:0,27,260	1/1:6,8:14:33.03:361,33,0	1/1:5,3:9:15.46:151,15,0	0/0:10,0:10:21.02:0,21,199	0/0:8,0:8:18.03:0,18,174	0/0:12,0:12:33.02:0,33,307	1/1:10,0:10:19.42:98,19,0	0/1:16,0:14:48.96:56,0,49	0/1:16,0:16:32.39:70,0,32	1/1:3,8:11:25.11:288,25,0	1/1:9,10:19:42.02:449,42,0	1/1:7,9:17:38.91:414,39,0	1/1:1,7:8:21.06:239,21,0	0/0:11,0:11:30.04:0,30,285	0/0:7,0:7:8.99:0,9,81	0/0:13,0:13:30.01:0,30,278	1/1:3,5:9:26.99:272,27,0	1/1:5,19:25:37.58:687,38,0	1/1:4,10:14:39.01:416,39,0	1/1:2,2:4:3.01:35,3,0
chr10	43612527	.	TTG	T	105.52	PASS	AB=0.927;AC=9;AF=0.161;AN=56;BaseQRankSum=3.901;DP=417;FS=0.000;HRun=0;HaplotypeScore=99.2215;InbreedingCoeff=0.1017;MQ=71.98;MQ0=4;MQRankSum=-1.354;QD=1.00;ReadPosRankSum=-5.864;VQSLOD=0.2252;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:96.30:0,96,1766	0/0:6,0:6:18.03:0,18,208	0/0:30,0:16:26.11:0,26,398	0/0:27,0:17:5.07:0,5,303	0/0:24,0:24:69.22:0,69,1283	0/0:15,0:15:45.13:0,45,807	0/0:18,0:18:51.15:0,51,905	0/0:23,0:23:66.18:0,66,1094	0/0:12,0:12:36.11:0,36,625	0/1:12,0:12:22.70:23,0,58	0/1:7,1:8:31.22:31,0,32	0/0:11,0:11:27.08:0,27,464	0/0:7,0:7:21.06:0,21,376	0/0:14,0:14:42.09:0,42,686	0/0:10,0:10:27.03:0,27,301	0/0:14,0:12:33.93:0,34,350	0/0:17,0:17:44.93:0,45,459	0/0:11,0:11:16.89:0,17,74	0/1:16,0:16:19.55:20,0,62	0/1:15,1:16:36.70:37,0,58	0/1:7,1:8:0.53:27,0,1	0/0:13,0:13:39.08:0,39,627	0/0:7,0:7:16.85:0,17,211	0/0:11,0:11:33.10:0,33,588	0/0:10,0:10:8.76:0,9,77	0/1:23,2:25:31.26:31,0,112	0/1:13,3:16:34.90:35,0,73	1/1:4,0:4:5.16:41,5,0
chr10	43612528	.	T	TG	1473.47	PASS	AB=1.000;AC=20;AF=0.357;AN=56;BaseQRankSum=6.459;DP=413;FS=6.316;HRun=8;HaplotypeScore=86.9271;InbreedingCoeff=0.4840;MQ=72.04;MQ0=4;MQRankSum=-5.662;QD=8.67;ReadPosRankSum=3.704;VQSLOD=1.5569;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:87.03:0,87,790	1/1:1,4:5:15.03:164,15,0	0/0:30,0:16:26.51:0,27,210	0/0:27,0:17:12.35:0,12,110	0/0:24,0:24:63:0,63,566	0/0:14,0:14:42.01:0,42,379	0/0:17,0:17:48:0,48,430	0/0:23,0:23:47.99:0,48,431	0/0:12,0:12:35.99:0,36,319	0/1:12,0:12:0.89:91,0,1	0/1:8,0:8:16.61:20,0,17	0/0:11,0:11:24:0,24,214	0/0:7,0:7:21:0,21,189	0/0:14,0:14:32.99:0,33,294	1/1:3,7:10:24.06:269,24,0	1/1:5,7:10:18.04:197,18,0	1/1:8,9:17:30.06:333,30,0	0/1:11,0:11:19.20:78,0,19	0/1:16,0:16:28.92:58,0,29	0/1:16,0:16:8.80:90,0,9	1/1:8,0:8:17.31:72,17,0	0/0:13,0:13:35.99:0,36,318	0/0:7,0:7:11.91:0,12,94	0/0:12,0:12:29.99:0,30,269	0/1:10,0:10:4.58:47,0,5	0/1:25,0:25:5.80:152,0,6	1/1:16,0:16:10.90:93,11,0	0/1:4,0:4:0.37:0,0,18
chr10	43612557	.	A	AC	9899.14	PASS	AB=0.532;AC=40;AF=0.714;AN=56;BaseQRankSum=-1.721;DP=426;FS=0.000;HRun=2;HaplotypeScore=56.4037;InbreedingCoeff=0.7609;MQ=55.39;MQ0=10;MQRankSum=-1.161;QD=35.74;ReadPosRankSum=2.460;VQSLOD=5.2517;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,126,1543	1/1:0,4:4:12.04:173,12,0	0/0:22,0:5:5.99:0,6,57	0/0:13,0:7:8.23:0,8,71	1/1:1,23:24:69.23:980,69,0	0/0:14,0:14:42.13:0,42,520	0/0:20,0:18:45.14:0,45,553	0/0:19,0:19:57.14:0,57,676	0/0:18,0:18:51.16:0,51,632	1/1:1,17:18:18.19:697,18,0	1/1:0,7:7:18.06:259,18,0	0/1:1,9:10:18.73:198,0,19	1/1:1,7:8:21.07:302,21,0	1/1:0,13:13:39.13:560,39,0	1/1:0,12:12:30.10:431,30,0	1/1:2,11:11:24.08:345,24,0	0/1:3,18:21:17.01:676,0,17	1/1:2,16:18:8.01:567,8,0	1/1:8,8:14:8.49:326,8,0	1/1:2,14:16:36.12:512,36,0	1/1:0,8:8:18.06:259,18,0	1/1:1,11:12:33.11:475,33,0	1/1:0,10:10:27.09:388,27,0	1/1:0,14:14:42.14:605,42,0	1/1:0,9:9:27.09:388,27,0	1/1:1,22:22:66.22:946,66,0	1/1:2,15:16:45.15:647,45,0	1/1:0,4:4:12.04:165,12,0
chr10	43612837	.	C	CTT	5447.25	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=5.959;DP=561;FS=7.230;HRun=9;HaplotypeScore=93.3170;InbreedingCoeff=0.9264;MQ=65.84;MQ0=12;MQRankSum=-3.920;QD=27.37;ReadPosRankSum=-2.988;VQSLOD=4.0003;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,111,1163	0/0:5,0:5:12.03:0,12,128	0/0:26,0:9:14.85:0,15,139	0/0:38,0:15:11.26:0,11,178	0/0:29,0:29:66.09:0,66,695	0/0:19,0:19:57.14:0,57,606	0/0:21,0:21:60.15:0,60,638	1/1:9,0:22:3.26:90,3,0	0/0:26,0:26:63.13:0,63,670	1/1:12,5:16:45.14:609,45,0	1/1:15,5:20:50.84:591,51,0	0/0:20,0:20:54.12:0,54,567	0/0:7,0:7:18.04:0,18,192	0/0:14,0:14:42.09:0,42,439	0/0:18,0:18:54.14:0,54,575	0/0:14,0:14:36.08:0,36,375	0/0:23,0:22:54.10:0,54,566	1/1:14,9:23:53.94:724,54,0	1/1:22,8:29:65.36:883,65,0	1/1:13,3:16:38.98:458,39,0	1/1:7,4:12:32.38:395,32,0	0/0:14,0:14:42.10:0,42,441	0/0:10,0:10:1.38:0,1,201	0/0:32,0:32:81.15:0,81,849	1/1:6,4:9:20.98:281,21,0	1/1:12,4:17:41.38:497,41,0	1/1:15,6:22:59.59:780,60,0	1/1:10,0:10:11.97:140,12,0
chr10	43612846	.	TAAA	T	2751.63	PASS	AB=0.669;AC=13;AF=0.232;AN=56;BaseQRankSum=11.469;DP=559;FS=13.648;HRun=4;HaplotypeScore=111.8619;InbreedingCoeff=0.2376;MQ=65.70;MQ0=16;MQRankSum=-5.443;QD=18.10;ReadPosRankSum=2.524;VQSLOD=-0.2212;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,117,2381	0/0:4,0:4:12.04:0,12,247	0/0:36,0:10:24.03:0,24,347	0/0:50,0:19:37.71:0,38,519	0/0:27,0:27:75.26:0,75,1564	0/0:23,0:23:69.22:0,69,1422	0/0:21,0:21:63.20:0,63,1245	0/0:20,0:20:41.87:0,42,471	0/0:23,0:23:69.23:0,69,1362	0/1:7,9:15:58.41:290,0,58	0/1:6,10:17:40.20:284,0,40	0/0:22,0:22:66.22:0,66,1367	0/0:7,0:7:21.07:0,21,404	0/0:17,0:17:48.15:0,48,920	0/0:20,0:20:54.18:0,54,1045	0/0:15,0:15:36.12:0,36,730	0/0:26,0:25:72.18:0,72,1369	0/1:9,7:18:21.60:282,0,22	0/1:17,7:24:99:320,0,131	1/1:5,8:14:5.05:386,5,0	0/1:6,5:12:35.36:184,0,35	0/0:16,0:16:48.14:0,48,959	0/0:9,0:9:24.08:0,24,475	0/0:30,0:30:87.25:0,87,1823	0/1:5,2:7:2.56:95,0,3	0/1:6,7:16:17.25:388,0,17	1/1:7,12:22:0.26:524,0,0	1/1:0,3:4:11.91:154,12,0
chr10	43612871	.	CAAAACAG	C	1009	PASS	AB=1.000;AC=4;AF=0.071;AN=56;BaseQRankSum=1.354;DP=522;FS=0.000;HRun=0;HaplotypeScore=160.4960;InbreedingCoeff=0.4506;MQ=61.95;MQ0=16;MQRankSum=3.070;QD=19.40;ReadPosRankSum=-4.027;VQSLOD=2.1565;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,108,3871	0/1:4,0:4:20.48:20,0,153	0/0:39,0:12:34.67:0,35,872	0/0:45,0:15:30.17:0,30,768	0/0:21,0:21:63.22:0,63,2452	0/0:25,0:25:75.26:0,75,2602	0/0:16,0:16:48.16:0,48,1816	1/1:1,20:21:51.12:938,51,0	0/0:16,0:16:48.16:0,48,1872	0/0:13,0:13:34.19:0,34,372	0/0:13,0:13:32.28:0,32,349	0/0:22,0:22:66.23:0,66,2470	0/0:6,0:6:18.06:0,18,607	0/0:15,0:15:45.15:0,45,1509	0/0:20,0:20:54.19:0,54,1744	0/0:13,0:13:33.11:0,33,1157	0/1:27,0:26:99:165,0,1061	0/0:16,0:16:39.89:0,40,488	0/0:17,0:17:47.44:0,47,472	0/0:15,0:15:18.93:0,19,366	0/0:10,0:10:24.79:0,25,303	0/0:16,0:16:45.15:0,45,1625	0/0:7,0:7:21.07:0,21,751	0/0:28,0:28:81.28:0,81,3048	0/0:9,0:9:24.47:0,24,361	0/0:15,0:15:13.83:0,14,318	0/0:22,0:22:50.92:0,51,592	0/0:13,0:13:36.55:0,37,528
chr10	43612876	.	C	CAAA	1711.71	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=0.961;DP=522;FS=5.837;HRun=4;HaplotypeScore=126.8500;InbreedingCoeff=0.9736;MQ=63.62;MQ0=9;MQRankSum=0.594;QD=34.93;ReadPosRankSum=-0.596;VQSLOD=1.2325;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,99,1651	1/1:0,2:3:9:161,9,0	0/0:36,0:13:35.92:0,36,495	0/0:42,0:17:33.88:0,34,409	0/0:22,0:22:66.23:0,66,1126	0/0:24,0:24:69.24:0,69,1189	0/0:17,0:17:51.13:0,51,847	1/1:20,0:20:24.77:415,25,0	0/0:17,0:17:48.15:0,48,816	0/0:16,0:16:42.09:0,42,574	0/0:16,0:16:45.04:0,45,628	0/0:24,0:24:66.21:0,66,1125	0/0:6,0:6:18.06:0,18,302	0/0:15,0:15:45.09:0,45,742	0/0:21,0:21:57.18:0,57,956	0/0:12,0:12:30.09:0,30,491	1/1:3,14:25:69.22:1273,69,0	0/0:18,0:18:48.14:0,48,666	0/0:16,0:16:45.13:0,45,616	0/0:17,0:17:48.13:0,48,658	0/0:10,0:10:27.09:0,27,403	0/0:15,0:15:42.14:0,42,731	0/0:8,0:8:24.06:0,24,392	0/0:25,0:25:69.24:0,69,1211	0/0:10,0:10:30.08:0,30,436	0/0:15,0:15:45.10:0,45,595	0/0:22,0:22:66.19:0,66,889	0/0:13,0:13:39.13:0,39,590
chr10	43612924	.	GAA	G	3224.03	PASS	AB=0.589;AC=31;AF=0.554;AN=56;BaseQRankSum=9.613;DP=501;FS=4.193;HRun=14;HaplotypeScore=99.5764;InbreedingCoeff=0.8841;MQ=75.53;MQ0=6;MQRankSum=-1.271;QD=12.17;ReadPosRankSum=4.320;VQSLOD=2.9517;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:10,5:33:75.69:91,0,76	1/1:1,0:4:8.22:36,8,0	0/0:32,0:23:3.94:0,4,249	0/0:28,0:20:13.65:0,14,230	0/0:17,0:18:38.44:0,38,471	0/0:25,0:27:56.62:0,57,725	0/0:14,1:16:16.86:0,17,526	1/1:5,8:13:29.84:257,30,0	0/0:14,0:15:32.59:0,33,413	1/1:6,10:17:35.79:325,36,0	1/1:4,5:11:19.93:157,20,0	0/0:14,1:18:16.81:0,17,458	0/0:11,0:12:35.61:0,36,471	0/0:11,0:13:32.59:0,33,416	1/1:3,2:19:19.83:96,20,0	1/1:2,1:23:37.51:129,38,0	1/1:7,0:29:49.32:214,49,0	1/1:3,9:16:36.13:287,36,0	1/1:2,14:16:35.78:319,36,0	1/1:5,8:15:26.13:218,26,0	1/1:1,5:7:11.72:95,12,0	0/0:16,0:16:35.59:0,36,441	0/0:10,0:10:21.07:0,21,294	0/0:24,0:29:53.63:0,54,674	1/1:1,13:18:40.98:325,41,0	1/1:2,13:16:38.74:344,39,0	1/1:3,12:15:36.02:332,36,0	1/1:2,9:11:24:222,24,0
chr10	43613298	.	A	AT	23054.61	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=-5.607;DP=714;FS=7.907;HRun=0;HaplotypeScore=84.3812;InbreedingCoeff=0.9682;MQ=67.37;MQ0=0;MQRankSum=-2.005;QD=43.91;ReadPosRankSum=5.394;VQSLOD=4.6266;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,126,1759	1/1:0,11:11:30.10:479,30,0	0/0:27,0:26:70.39:0,70,991	0/0:21,0:21:57.16:0,57,766	0/0:22,0:22:66.22:0,66,922	0/0:26,0:26:78.26:0,78,1091	0/0:29,0:29:87.29:0,87,1217	1/1:0,18:18:54.17:830,54,0	0/0:18,1:19:3.20:0,3,606	1/1:1,19:20:60.20:949,60,0	1/1:4,18:22:51.17:795,51,0	1/1:1,24:25:66.23:1055,66,0	1/1:0,25:25:75.26:1197,75,0	1/1:0,31:31:93.32:1487,93,0	1/1:1,27:28:75.26:1197,75,0	1/1:1,26:27:75.26:1197,75,0	1/1:1,44:45:99:2110,132,0	1/1:0,32:32:81.28:1294,81,0	1/1:2,18:20:44.08:891,44,0	1/1:0,23:23:66.23:1054,66,0	1/1:1,39:40:96.33:1534,96,0	1/1:0,23:24:69.23:1088,69,0	1/1:0,18:18:54.18:862,54,0	1/1:0,40:40:99:1774,111,0	1/1:0,26:26:72.25:1151,72,0	1/1:0,20:20:60.20:959,60,0	1/1:0,22:22:48.16:767,48,0	1/1:0,8:8:24.08:384,24,0
chr10	43615288	.	TC	T	1458.78	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.209;DP=589;FS=1.322;HRun=1;HaplotypeScore=55.3981;InbreedingCoeff=0.9837;MQ=81.56;MQ0=0;MQRankSum=-2.377;QD=31.71;ReadPosRankSum=1.838;VQSLOD=3.3777;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:99:0,99,1417	0/0:9,0:9:27.09:0,27,404	0/0:21,0:21:61.74:0,62,843	0/0:14,0:14:42:0,42,470	0/0:21,0:21:60.16:0,60,854	0/0:26,0:26:78.25:0,78,1146	0/0:35,0:35:99:0,105,1501	0/0:33,0:33:96.29:0,96,1380	0/0:16,0:16:48.16:0,48,718	0/0:23,0:23:69.22:0,69,1001	0/0:21,0:21:60.17:0,60,855	0/0:20,0:20:60.19:0,60,876	0/0:16,0:16:48.16:0,48,715	0/0:12,0:12:36.09:0,36,498	1/1:0,21:21:54.18:753,54,0	1/1:1,24:25:53.44:827,53,0	0/0:35,0:35:99:0,99,1439	0/0:27,0:27:81.20:0,81,1148	0/0:20,0:20:60.15:0,60,822	0/0:17,0:17:48.11:0,48,673	0/0:21,0:21:60.19:0,60,877	0/0:27,0:27:81.26:0,81,1190	0/0:28,0:28:84.07:0,84,1225	0/0:18,0:18:54.17:0,54,788	0/0:16,0:16:48.16:0,48,709	0/0:16,0:16:48.16:0,48,702	0/0:14,0:14:42.13:0,42,608	0/0:4,0:4:12.04:0,12,180
chr10	43615837	.	CTTT	C	3807.33	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-2.053;DP=505;FS=7.051;HRun=15;HaplotypeScore=90.6959;InbreedingCoeff=0.9593;MQ=68.13;MQ0=3;MQRankSum=-2.494;QD=19.73;ReadPosRankSum=6.218;VQSLOD=2.6369;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:35:76.46:0,76,1197	0/0:2,0:3:8.99:0,9,88	0/0:10,0:8:11.87:0,12,106	0/0:10,0:10:11.92:0,12,123	0/0:7,0:20:40.89:0,41,334	0/0:20,0:25:54.12:0,54,856	0/0:11,0:11:33.05:0,33,538	0/0:16,0:34:73.02:0,73,606	0/0:16,0:17:27.04:0,27,395	1/1:5,15:20:44.99:495,45,0	1/1:6,13:22:23.57:280,24,0	0/0:6,0:16:32.47:0,32,244	0/0:3,0:15:35.87:0,36,276	0/0:4,0:11:23.94:0,24,206	0/0:8,0:17:25.15:0,25,186	0/0:9,0:21:32.94:0,33,335	0/0:9,0:26:49.11:0,49,395	1/1:12,17:28:24:436,24,0	1/1:8,14:23:44.84:473,45,0	1/1:1,15:16:18.46:414,18,0	1/1:2,5:7:9:101,9,0	0/0:4,0:5:8.97:0,9,71	0/0:7,0:15:32.91:0,33,290	0/0:8,0:15:32.91:0,33,287	1/1:4,10:13:20.98:235,21,0	1/1:7,16:23:49.51:553,50,0	1/1:6,19:25:56.99:621,57,0	1/1:6,6:12:15.86:198,16,0
chr10	43616310	.	AAAAAAAG	A	484.16	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=-0.635;DP=441;FS=14.531;HRun=0;HaplotypeScore=111.4816;InbreedingCoeff=0.5575;MQ=59.92;MQ0=40;MQRankSum=-1.968;QD=4.40;ReadPosRankSum=-1.275;VQSLOD=1.3417;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:21:46.26:0,46,883	0/0:4,0:1:3.01:0,3,85	0/0:56,0:15:32.48:0,32,337	0/0:73,0:22:22.63:0,23,222	0/0:14,0:12:18.42:0,18,253	0/0:18,0:14:12.25:0,12,581	0/0:8,0:7:14.55:0,15,337	0/0:31,0:26:31.86:0,32,616	0/0:7,0:5:2.32:0,2,189	1/1:16,0:14:14.14:133,14,0	1/1:10,0:8:8.93:101,9,0	0/0:12,0:11:13.20:0,13,551	0/0:10,0:9:18.04:0,18,391	0/0:3,0:3:6.02:0,6,148	0/0:12,0:11:17.05:0,17,91	0/0:10,0:9:14.53:0,15,93	0/0:13,0:11:14.49:0,14,244	0/1:15,0:12:9.10:18,0,9	0/1:10,0:9:24.07:56,0,24	1/1:3,5:7:11.84:127,12,0	1/1:7,0:6:0.09:3,0,0	0/1:6,0:6:3.50:4,0,262	0/0:14,0:18:25.53:0,26,797	0/0:17,0:16:10.15:0,10,463	1/1:13,1:12:4.93:68,5,0	1/1:9,0:10:7.91:72,8,0	1/1:10,0:9:3.86:59,4,0	1/1:4,0:4:3.35:17,3,0
chr10	43616312	.	AAAAAG	A	2602.90	PASS	AB=1.000;AC=31;AF=0.554;AN=56;BaseQRankSum=-7.488;DP=429;FS=6.018;HRun=0;HaplotypeScore=91.9039;InbreedingCoeff=0.3809;MQ=62.32;MQ0=39;MQRankSum=-2.170;QD=11.62;ReadPosRankSum=-5.518;VQSLOD=-0.1262;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:21:3.27:0,3,464	0/0:4,0:1:3.01:0,3,56	0/0:56,0:17:1.69:0,2,253	0/0:71,0:22:17.44:0,17,157	0/1:13,0:11:22.32:22,0,80	0/0:19,0:15:7.86:0,8,279	0/1:8,0:7:21.81:22,0,169	0/1:27,0:23:0.79:1,0,234	0/0:6,0:4:10.83:0,11,126	1/1:3,13:14:42.03:571,42,0	1/1:9,1:9:26.96:332,27,0	0/0:12,0:11:2.59:0,3,313	0/0:10,0:9:17.86:0,18,219	0/0:2,0:2:6.02:0,6,89	1/1:12,0:11:19.50:170,19,0	1/1:10,0:9:21.40:146,21,0	0/1:12,0:10:4.02:4,0,98	1/1:7,8:12:12.01:160,12,0	1/1:10,0:9:20.20:204,20,0	1/1:7,0:6:11.93:137,12,0	1/1:7,0:6:9.01:104,9,0	0/1:6,0:6:12.03:12,0,144	0/1:19,0:19:17.01:17,0,391	0/1:15,0:15:74.69:75,0,214	1/1:7,7:12:19.12:197,19,0	1/1:3,6:9:21:244,21,0	1/1:9,1:9:19.26:293,19,0	1/1:4,0:4:5.98:77,6,0
chr10	43616313	.	AAAAG	A	2560.95	PASS	AB=1.000;AC=34;AF=0.607;AN=56;BaseQRankSum=-6.621;DP=423;FS=6.006;HRun=0;HaplotypeScore=85.7938;InbreedingCoeff=0.1713;MQ=62.79;MQ0=38;MQRankSum=-2.418;QD=8.00;ReadPosRankSum=-5.936;VQSLOD=-0.4186;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:21:22.04:22,0,286	0/0:4,0:1:3.01:0,3,42	0/1:54,0:17:6.03:6,0,242	0/0:69,0:21:17.92:0,18,192	0/1:13,0:11:23.02:44,0,23	0/1:19,0:15:13.27:13,0,164	0/1:10,0:9:56.06:56,0,131	0/1:25,0:21:11.46:11,0,111	0/0:6,0:4:10.69:0,11,80	1/1:16,0:14:42.02:434,42,0	1/1:10,0:9:26.85:241,27,0	0/0:11,0:10:1.06:0,1,230	0/0:10,0:9:14.25:0,14,142	0/0:2,0:2:5.98:0,6,55	1/1:11,1:11:22.13:232,22,0	1/1:10,1:10:23.37:306,23,0	0/1:11,0:9:13:13,0,40	1/1:15,0:12:12.02:149,12,0	1/1:8,1:8:20.98:201,21,0	1/1:6,1:6:11.83:108,12,0	1/1:6,1:6:8.81:92,9,0	0/1:6,0:6:6.57:7,0,99	0/1:19,0:19:46.88:47,0,264	0/1:16,0:16:91.67:92,0,137	1/1:14,0:12:17.14:154,17,0	1/1:9,0:9:21.01:250,21,0	1/1:9,0:8:17.39:207,17,0	1/1:4,0:4:5.98:58,6,0
chr10	43616314	.	AAAG	A	2625.46	PASS	AB=1.000;AC=40;AF=0.714;AN=56;BaseQRankSum=-5.911;DP=411;FS=0.000;HRun=0;HaplotypeScore=79.3664;InbreedingCoeff=-0.1210;MQ=63.69;MQ0=36;MQRankSum=-1.726;QD=6.42;ReadPosRankSum=-5.742;VQSLOD=0.2710;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:21:76.88:77,0,139	0/1:5,0:2:14.95:15,0,22	0/1:49,0:16:4.85:5,0,185	0/1:67,0:20:10.05:10,0,141	1/1:14,0:12:16.20:109,16,0	0/1:18,0:15:50.76:60,0,51	0/1:10,0:9:58.62:59,0,66	0/1:26,0:22:8.57:94,0,9	0/1:7,0:5:11.17:11,0,35	1/1:16,0:14:42:392,42,0	1/1:9,1:9:26.51:205,27,0	0/1:11,0:10:1.47:1,0,129	0/1:9,0:8:8.16:8,0,62	0/0:2,0:2:5.78:0,6,35	1/1:11,0:10:21.28:199,21,0	1/1:11,0:10:19.47:231,19,0	0/1:11,0:9:3.55:47,0,4	1/1:13,2:12:12.01:119,12,0	1/1:8,0:8:20.96:183,21,0	1/1:7,0:6:11.35:91,11,0	1/1:7,0:7:11.33:83,11,0	0/1:5,0:5:12.98:13,0,44	0/1:18,0:18:65.75:66,0,108	0/1:15,0:15:50.40:98,0,50	1/1:11,2:12:20.24:151,20,0	1/1:9,0:9:21:201,21,0	1/1:7,2:8:23.84:204,24,0	1/1:2,1:3:5.97:52,6,0
chr10	43616315	.	AAG	A	3385.76	PASS	AB=1.000;AC=43;AF=0.768;AN=56;BaseQRankSum=-5.094;DP=404;FS=0.588;HRun=0;HaplotypeScore=71.3315;InbreedingCoeff=-0.1052;MQ=62.97;MQ0=35;MQRankSum=-2.045;QD=8.42;ReadPosRankSum=-4.729;VQSLOD=1.9017;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:21:15.68:134,0,16	0/1:5,0:2:7.61:15,0,8	0/1:48,0:16:7.74:8,0,144	0/1:62,0:18:46.60:47,0,119	1/1:14,0:12:28.27:179,28,0	1/1:17,1:15:10.35:155,10,0	0/1:10,0:9:26.08:80,0,26	1/1:22,3:21:45.02:317,45,0	0/1:7,0:5:3.09:37,0,3	1/1:16,0:14:41.92:351,42,0	1/1:10,0:9:26.24:182,26,0	0/1:11,0:10:24.59:25,0,41	0/1:9,0:8:13.37:24,0,13	0/0:2,0:2:1.79:0,2,7	1/1:7,4:10:22.73:171,23,0	1/1:9,2:10:20.87:200,21,0	1/1:11,0:9:13.51:150,14,0	1/1:15,0:12:12:106,12,0	1/1:7,0:7:20.91:168,21,0	1/1:7,0:6:10.21:74,10,0	1/1:7,0:7:11.89:87,12,0	0/1:5,0:5:4.86:21,0,5	0/1:19,0:19:0.35:174,0,0	0/1:15,0:15:3.04:130,0,3	1/1:13,0:12:20.81:151,21,0	1/1:8,1:9:20.96:175,21,0	1/1:8,1:8:23.70:177,24,0	1/1:3,0:3:5.97:47,6,0
chr10	43616316	.	AG	A	4332.82	PASS	AB=0.962;AC=54;AF=0.964;AN=56;BaseQRankSum=-5.570;DP=398;FS=0.000;HRun=1;HaplotypeScore=64.6797;InbreedingCoeff=-0.0526;MQ=63.40;MQ0=32;MQRankSum=-2.334;QD=10.89;ReadPosRankSum=0.989;VQSLOD=2.7824;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:20:43.37:263,43,0	1/1:4,0:2:3.45:22,3,0	0/1:44,3:16:28.43:28,0,99	0/1:60,1:17:67.75:68,0,86	1/1:11,3:12:29.84:254,30,0	1/1:16,1:15:38.42:284,38,0	1/1:10,0:9:19.13:116,19,0	1/1:23,2:21:56.67:437,57,0	1/1:7,0:5:11.65:113,12,0	1/1:16,0:14:41.76:316,42,0	1/1:9,1:9:24.73:147,25,0	1/1:11,0:10:19.54:90,20,0	1/1:7,1:8:14.09:86,14,0	1/1:2,0:2:5.10:22,5,0	1/1:11,0:10:23.11:167,23,0	1/1:11,1:11:28.18:206,28,0	1/1:11,0:9:19.79:177,20,0	1/1:15,0:12:11.95:93,12,0	1/1:8,0:8:20.86:157,21,0	1/1:7,0:6:11.58:71,12,0	1/1:7,0:7:11.76:76,12,0	1/1:5,0:5:12.63:75,13,0	1/1:18,1:19:48.98:326,49,0	1/1:15,0:15:33.43:227,33,0	1/1:13,0:12:20.82:162,21,0	1/1:8,0:8:20.89:156,21,0	1/1:9,0:8:23.64:156,24,0	1/1:3,0:3:5.94:41,6,0
chr10	43619979	.	A	AAGG	9943.94	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-12.470;DP=630;FS=5.613;HRun=0;HaplotypeScore=83.0883;InbreedingCoeff=0.9999;MQ=80.32;MQ0=0;MQRankSum=-5.029;QD=46.69;ReadPosRankSum=0.589;VQSLOD=6.7735;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:72.22:0,72,1121	0/0:13,0:13:33.11:0,33,528	0/0:21,0:21:54.18:0,54,829	0/0:25,0:24:48.56:0,49,695	0/0:36,0:36:99:0,99,1566	0/0:23,0:23:57.16:0,57,865	0/0:20,0:20:57.19:0,57,903	0/0:34,0:34:81.25:0,81,1226	0/0:15,0:15:45.15:0,45,713	1/1:3,15:19:48.12:965,48,0	1/1:2,14:16:33.11:672,33,0	0/0:30,0:30:87.30:0,87,1382	0/0:14,0:14:39.13:0,39,624	0/0:22,0:22:63.21:0,63,1008	0/0:26,0:26:69.24:0,69,1095	0/0:27,0:27:75.23:0,75,1152	0/0:36,0:36:99:0,102,1576	1/1:4,18:22:48.16:1041,48,0	1/1:0,16:18:57.18:1105,57,0	1/1:3,15:18:33.11:720,33,0	1/1:6,35:42:66.18:1388,66,0	0/0:15,0:15:42.14:0,42,671	0/0:20,0:20:60.19:0,60,925	0/0:16,0:16:48.16:0,48,768	1/1:5,15:21:42.14:911,42,0	1/1:3,16:20:54.17:1119,54,0	1/1:1,19:22:51.18:1102,51,0	1/1:0,14:14:42.14:920,42,0
chr10	43621023	.	T	TGG	447.56	PASS	AB=0.837;AC=6;AF=0.107;AN=56;BaseQRankSum=-3.710;DP=506;FS=69.852;HRun=0;HaplotypeScore=123.7998;InbreedingCoeff=-0.1435;MQ=48.67;MQ0=21;MQRankSum=-0.848;QD=4.81;ReadPosRankSum=1.419;VQSLOD=0.2594;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:66.63:0,67,807	0/0:9,0:9:14.55:0,15,153	0/0:51,0:11:25.72:0,26,218	0/0:46,0:11:11.96:0,12,126	0/0:19,1:20:29.29:0,29,393	0/0:22,0:22:60.17:0,60,743	0/0:21,0:22:54.71:0,55,689	0/0:26,0:26:51.72:0,52,617	0/0:13,0:13:33.06:0,33,413	0/0:19,1:20:34.54:0,35,500	0/1:11,2:13:11.79:12,0,194	0/0:25,0:25:72.03:0,72,771	0/0:10,0:10:27.06:0,27,314	0/0:14,0:14:32.97:0,33,342	0/0:13,0:12:36.05:0,36,397	0/0:11,0:11:24.06:0,24,274	0/0:19,0:19:23.59:0,24,284	0/1:8,4:13:80.04:123,0,80	0/0:10,0:10:25.48:0,25,289	0/1:10,1:10:61.51:62,0,104	0/0:5,0:5:0.08:0,0,22	0/0:16,0:16:8.67:0,9,300	0/0:15,0:15:37.82:0,38,375	0/0:7,0:7:8.72:0,9,77	0/0:12,1:13:4.07:0,4,234	0/1:18,5:20:99:140,0,370	0/1:14,7:23:99:166,0,275	0/1:9,0:9:66.43:66,0,82
chr10	43621034	.	C	CT	1241.62	PASS	AB=0.973;AC=18;AF=0.321;AN=56;BaseQRankSum=2.762;DP=462;FS=1.193;HRun=3;HaplotypeScore=101.7414;InbreedingCoeff=0.4581;MQ=43.03;MQ0=21;MQRankSum=-3.721;QD=6.53;ReadPosRankSum=2.293;VQSLOD=0.6253;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:55.76:0,56,511	0/0:8,0:8:20.50:0,21,129	0/0:40,0:6:4.92:0,5,35	0/1:46,0:8:21.80:22,0,62	0/0:19,0:19:18.14:0,18,118	0/0:20,0:20:43.90:0,44,414	0/0:24,0:24:38.44:0,38,482	0/1:17,0:16:2.28:2,0,68	0/1:13,0:13:2.37:2,0,127	0/0:20,0:20:27.91:0,28,218	0/1:11,1:12:24.98:25,0,40	1/1:13,10:24:37.91:391,38,0	1/1:3,9:12:21.06:256,21,0	1/1:8,4:12:21.16:221,21,0	0/0:16,0:15:4.52:0,5,93	0/0:13,0:13:1.74:0,2,79	0/0:16,0:16:29.97:0,30,188	0/0:9,0:8:11.70:0,12,75	0/0:15,0:15:28.98:0,29,180	0/0:8,0:7:5.31:0,5,36	0/1:5,0:5:0:0,0,0	1/1:6,12:18:30.44:341,30,0	1/1:6,7:13:8.51:108,9,0	1/1:5,2:7:2.82:36,3,0	0/0:14,0:14:15.50:0,16,82	0/0:17,1:15:4.73:0,5,223	0/1:10,1:11:10.42:10,0,108	0/0:3,0:3:5.86:0,6,35
chr10	43621161	.	C	CCCATG	5684.91	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-11.744;DP=602;FS=2.310;HRun=0;HaplotypeScore=109.9060;InbreedingCoeff=0.9955;MQ=81.90;MQ0=0;MQRankSum=-1.339;QD=53.13;ReadPosRankSum=2.879;VQSLOD=5.5465;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,99,1856	0/0:7,0:7:15.05:0,15,300	0/0:26,0:26:63.22:0,63,1205	0/0:22,0:22:54.18:0,54,1039	0/0:23,0:23:57.18:0,57,1116	0/0:21,0:21:54.17:0,54,1015	0/0:25,0:25:63.22:0,63,1279	0/0:24,0:24:60.20:0,60,1148	0/0:22,0:22:63.22:0,63,1279	0/0:26,0:26:69.24:0,69,1393	0/0:15,0:15:36.12:0,36,731	1/1:4,12:16:24.08:689,24,0	1/1:2,13:15:27.09:817,27,0	1/1:1,14:16:36.12:1090,36,0	0/0:15,0:15:39.13:0,39,791	0/0:20,0:20:57.20:0,57,1157	0/0:44,0:44:99:0,114,2313	0/0:18,0:18:45.15:0,45,913	0/0:16,0:16:33.11:0,33,667	0/0:13,0:13:36.12:0,36,731	0/0:34,0:34:93.32:0,93,1874	1/1:3,17:20:30.10:909,30,0	1/1:4,10:14:27.09:816,27,0	1/1:4,21:26:45.15:1364,45,0	0/0:11,0:11:27.05:0,27,506	0/0:20,0:20:51.18:0,51,1033	0/0:42,0:42:99:0,120,2436	0/0:14,0:14:42.14:0,42,839
chr10	43621485	.	T	TGCTCAGTAAC	1781.18	PASS	AB=0.975;AC=21;AF=0.389;AN=54;BaseQRankSum=1.927;DP=331;FS=0.785;HRun=0;HaplotypeScore=107.1787;InbreedingCoeff=0.6866;MQ=56.87;MQ0=31;MQRankSum=-0.098;QD=24.07;ReadPosRankSum=-0.516;VQSLOD=2.9527;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:30:66.02:0,66,1703	0/0:5,0:5:12.04:0,12,299	0/0:30,0:8:21.04:0,21,404	0/1:38,0:9:99:131,0,128	0/0:16,0:15:35.13:0,35,824	0/0:19,0:19:51.13:0,51,1309	0/0:16,0:16:30.81:0,31,813	0/0:38,0:37:95.65:0,96,2570	0/0:8,0:7:15.03:0,15,323	1/1:1,0:1:3.01:46,3,0	0/0:1,0:1:0:0,0,0	0/0:9,0:8:24.06:0,24,536	0/0:9,0:9:19.53:0,20,303	0/0:7,0:7:21.02:0,21,232	1/1:2,0:2:6.01:94,6,0	1/1:3,3:5:15.04:540,15,0	0/0:37,0:35:84.03:0,84,2160	1/1:6,1:3:6.02:272,6,0	1/1:4,0:1:3.01:46,3,0	1/1:3,0:1:2.98:21,3,0	1/1:5,2:6:12.04:449,12,0	0/0:5,0:5:12.03:0,12,333	0/0:10,0:10:24.08:0,24,563	0/0:11,0:9:11.82:0,12,423	1/1:2,0:1:3.01:50,3,0	1/1:0,2:2:6.02:265,6,0	1/1:1,0:1:3.01:44,3,0	./.
chr10	43621490	.	T	TACA	103.37	PASS	AB=1.000;AC=9;AF=0.225;AN=40;BaseQRankSum=5.374;DP=332;FS=1.247;HRun=0;HaplotypeScore=73.0252;InbreedingCoeff=0.6728;MQ=49.07;MQ0=37;MQRankSum=-3.541;QD=1.52;ReadPosRankSum=3.432;VQSLOD=1.2569;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:29:69.19:0,69,1064	0/0:4,0:4:9.03:0,9,151	0/0:38,0:8:16.87:0,17,191	0/1:47,0:6:6.33:6,0,44	0/0:17,0:16:40.69:0,41,637	0/0:20,0:20:51.17:0,51,841	0/0:13,0:13:27.03:0,27,402	0/0:37,0:36:99:0,102,1669	0/0:10,0:9:18.03:0,18,253	./.	./.	0/0:10,0:9:24.08:0,24,421	0/0:9,0:8:18.05:0,18,276	0/0:8,0:8:21.07:0,21,359	./.	1/1:3,3:4:3.40:91,3,0	0/0:34,0:32:72.25:0,72,1227	1/1:6,1:3:5.69:48,6,0	./.	./.	1/1:4,2:5:3.74:13,4,0	0/0:4,0:4:12:0,12,181	0/0:6,0:6:18.06:0,18,310	0/0:11,0:9:17.26:0,17,229	./.	1/1:0,2:2:6.02:66,6,0	./.	./.
chr10	43621503	.	T	TGGG	390.04	PASS	AC=8;AF=0.200;AN=40;BaseQRankSum=6.274;DP=335;FS=1.084;HRun=0;HaplotypeScore=71.5371;InbreedingCoeff=0.7894;MQ=46.35;MQ0=57;MQRankSum=-3.045;QD=17.73;ReadPosRankSum=0.402;VQSLOD=2.8561;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:26:57.11:0,57,974	0/0:6,0:6:12.04:0,12,223	0/0:41,0:8:20.31:0,20,310	0/0:50,0:6:2:0,2,22	0/0:15,0:12:27.09:0,27,487	0/0:20,0:19:48.16:0,48,847	0/0:13,0:13:24.08:0,24,433	0/0:29,0:28:72.91:0,73,1216	0/0:9,0:8:12.04:0,12,224	./.	./.	0/0:8,0:7:21.07:0,21,371	0/0:9,0:8:15.52:0,16,248	0/0:8,0:8:23.89:0,24,349	./.	1/1:2,3:3:9.03:187,9,0	0/0:36,0:33:18.71:0,19,1315	1/1:6,1:3:6.02:100,6,0	./.	./.	1/1:4,2:5:9.03:103,9,0	0/0:4,0:4:8.87:0,9,140	0/0:8,0:7:21.07:0,21,357	0/0:11,0:7:12.95:0,13,143	./.	1/1:1,2:2:6.02:127,6,0	./.	./.
chr10	43621631	.	AT	A	3732.39	PASS	AB=0.870;AC=39;AF=0.696;AN=56;BaseQRankSum=-2.243;DP=370;FS=3.625;HRun=13;HaplotypeScore=60.1860;InbreedingCoeff=0.8188;MQ=74.75;MQ0=1;MQRankSum=-1.207;QD=15.11;ReadPosRankSum=0.647;VQSLOD=4.6752;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:17,3:20:11.64:12,0,384	0/0:3,0:10:22.73:0,23,114	0/0:21,0:14:11.87:0,12,161	0/0:16,0:11:8.48:0,8,88	1/1:3,17:21:46.73:334,47,0	0/0:9,0:10:26.87:0,27,243	0/0:11,0:13:22.92:0,23,236	0/0:11,0:19:40.30:0,40,237	0/0:11,0:11:24.03:0,24,228	1/1:2,26:30:46.23:474,46,0	1/1:1,8:8:17.88:131,18,0	1/1:0,6:6:17.90:131,18,0	1/1:2,4:6:11.92:88,12,0	1/1:1,8:9:20.87:153,21,0	1/1:1,17:17:47.73:350,48,0	1/1:1,18:19:18.75:299,19,0	0/0:5,1:21:36.80:0,37,268	1/1:2,6:9:17.74:124,18,0	1/1:5,8:14:1.92:144,2,0	1/1:3,9:13:2.70:174,3,0	1/1:1,6:7:17.89:131,18,0	1/1:0,9:9:23.86:175,24,0	1/1:0,6:6:14.91:109,15,0	1/1:0,9:9:20.88:153,21,0	1/1:0,10:10:23.82:175,24,0	1/1:0,9:12:32.96:215,33,0	1/1:3,14:17:43.26:310,43,0	1/1:0,2:3:8:50,8,0
chr10	43621657	.	T	TC	1162.37	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-0.420;DP=477;FS=0.000;HRun=2;HaplotypeScore=78.3121;InbreedingCoeff=0.9582;MQ=61.31;MQ0=20;MQRankSum=-4.826;QD=23.72;ReadPosRankSum=-0.723;VQSLOD=3.1296;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:72.20:0,72,855	1/1:1,6:8:18.05:237,18,0	0/0:38,0:16:35.52:0,36,330	0/0:22,0:8:7.80:0,8,52	0/0:21,0:21:57.11:0,57,654	0/0:16,0:15:39.12:0,39,482	0/0:13,0:13:30.08:0,30,349	1/1:2,11:12:29.98:372,30,0	0/0:9,0:9:15.05:0,15,185	0/0:28,0:28:75.17:0,75,872	0/0:13,0:12:24.07:0,24,286	0/0:13,0:13:33.04:0,33,360	0/0:9,0:9:20.99:0,21,231	0/0:8,0:8:21.02:0,21,241	0/0:22,0:21:51.15:0,51,620	0/0:24,0:24:60.03:0,60,718	1/1:6,22:27:52.04:695,52,0	0/0:17,0:15:39.04:0,39,427	0/0:15,0:12:35.95:0,36,376	0/0:15,0:15:33.10:0,33,407	0/0:18,0:17:41.99:0,42,435	0/0:10,0:10:30.08:0,30,355	0/0:12,0:12:36.09:0,36,420	0/0:13,0:13:30.06:0,30,343	0/0:13,0:13:29.93:0,30,348	0/0:20,0:19:54.12:0,54,610	0/0:25,0:24:57.63:0,58,683	0/0:8,0:7:18.04:0,18,209
chr10	43622650	.	AAGTC	A	4532.65	PASS	AB=0.929;AC=40;AF=0.714;AN=56;BaseQRankSum=7.082;DP=554;FS=3.491;HRun=0;HaplotypeScore=163.4088;InbreedingCoeff=0.5922;MQ=70.82;MQ0=0;MQRankSum=-8.396;QD=10.95;ReadPosRankSum=1.157;VQSLOD=4.4562;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:39.08:0,39,845	0/1:5,0:5:9.92:10,0,136	0/0:29,0:24:28.56:0,29,379	0/0:26,0:23:33.90:0,34,343	1/1:7,0:16:2.96:19,3,0	0/0:21,0:21:42.06:0,42,850	0/0:18,0:18:36.08:0,36,771	0/1:25,0:25:73.52:146,0,74	0/0:21,0:21:42.09:0,42,786	1/1:16,7:23:47.46:475,47,0	1/1:13,2:15:17.59:122,18,0	1/1:27,0:27:18.06:246,18,0	1/1:14,0:14:15.01:198,15,0	1/1:16,0:16:9.03:133,9,0	1/1:20,19:39:67.71:590,68,0	1/1:12,14:26:59.04:518,59,0	0/1:34,0:34:66.50:66,0,824	0/1:3,2:5:31.97:91,0,32	1/1:13,5:18:26.72:288,27,0	1/1:10,3:13:17.50:111,17,0	1/1:16,3:18:17.54:120,18,0	1/1:10,0:10:8.81:71,9,0	1/1:11,0:11:8.51:44,9,0	1/1:18,0:18:12.04:175,12,0	1/1:12,7:19:29.45:216,29,0	1/1:15,7:22:38.90:411,39,0	1/1:22,12:34:35.43:380,35,0	1/1:1,4:5:10.68:101,11,0
chr10	43622671	.	AGTCAGTCG	A	7109.72	PASS	AB=1.000;AC=40;AF=0.714;AN=56;BaseQRankSum=7.372;DP=501;FS=11.585;HRun=0;HaplotypeScore=183.0616;InbreedingCoeff=0.6133;MQ=61.63;MQ0=0;MQRankSum=-9.337;QD=18.91;ReadPosRankSum=-1.943;VQSLOD=3.2076;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:45.13:0,45,1595	0/1:6,0:6:3.94:4,0,371	0/0:26,0:19:43.88:0,44,883	0/0:23,0:21:38.80:0,39,583	1/1:11,0:11:2.96:19,3,0	0/0:15,0:15:45.09:0,45,1622	0/0:20,0:20:51.07:0,51,1629	0/1:22,0:21:29.97:30,0,437	0/0:20,0:20:57.03:0,57,1504	1/1:19,0:19:46.23:696,46,0	1/1:12,0:12:17.77:142,18,0	1/1:1,26:27:18.06:481,18,0	1/1:2,10:12:15.01:342,15,0	1/1:2,11:13:9.03:245,9,0	1/1:32,0:32:68.14:868,68,0	1/1:29,0:29:74.73:941,75,0	0/1:35,0:35:25.74:26,0,2043	0/1:5,0:5:31.99:147,0,32	1/1:6,0:16:38.62:512,39,0	1/1:11,0:11:17.51:130,18,0	1/1:14,0:13:17.60:141,18,0	1/1:0,9:9:8.82:143,9,0	1/1:0,10:10:8.55:64,9,0	1/1:1,22:23:12.04:316,12,0	1/1:18,0:18:25.86:318,26,0	1/1:18,0:18:44.86:651,45,0	1/1:17,0:30:39.06:685,39,0	1/1:4,0:4:12.04:210,12,0
chr10	43622683	.	GGTCGGTCGGCCA	G	7763.34	PASS	AB=0.908;AC=29;AF=0.518;AN=56;BaseQRankSum=12.714;DP=456;FS=39.262;HRun=0;HaplotypeScore=195.8278;InbreedingCoeff=0.4564;MQ=58.12;MQ0=0;MQRankSum=-12.650;QD=29.86;ReadPosRankSum=2.786;VQSLOD=2.9124;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:63.18:0,63,2700	0/0:7,0:7:21.07:0,21,975	0/0:23,0:21:54.77:0,55,1903	0/0:21,0:18:45.05:0,45,1176	0/0:10,0:10:3.01:0,3,48	0/0:19,0:19:54.19:0,54,2482	0/0:24,0:24:68.04:0,68,3242	0/0:18,0:17:51.16:0,51,1460	0/0:18,0:18:53.21:0,53,2421	1/1:5,7:12:27.07:873,27,0	1/1:6,2:8:2.97:21,3,0	0/1:28,0:28:99:101,0,179	0/1:11,0:11:27.84:28,0,79	1/1:11,0:11:8.22:64,8,0	1/1:3,19:22:33.04:960,33,0	1/1:10,14:24:72.11:1522,72,0	0/0:33,0:33:84.29:0,84,4109	0/1:2,2:4:10.95:262,0,11	1/1:11,5:16:30.08:787,30,0	1/1:5,3:8:3.01:69,3,0	0/1:5,4:9:0.13:23,0,0	0/1:10,0:10:60.71:93,0,61	0/1:11,0:11:13.95:14,0,88	0/1:23,0:23:31.97:32,0,76	1/1:6,7:13:20.93:284,21,0	1/1:10,7:17:40.07:1085,40,0	1/1:18,11:29:42.05:1183,42,0	1/1:0,4:4:12.04:364,12,0
chr10	43622691	.	GGCCA	G	3105.02	PASS	AB=0.571;AC=21;AF=0.375;AN=56;BaseQRankSum=11.502;DP=473;FS=38.152;HRun=0;HaplotypeScore=166.7295;InbreedingCoeff=0.8480;MQ=53.28;MQ0=3;MQRankSum=-9.862;QD=18.48;ReadPosRankSum=5.397;VQSLOD=1.6740;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:24:61.41:0,61,1131	0/0:9,0:9:27.09:0,27,526	0/0:24,0:20:42.02:0,42,782	0/0:20,0:17:38.77:0,39,680	0/0:12,0:11:12.04:0,12,183	0/0:19,0:19:48.16:0,48,952	0/0:25,0:25:66.23:0,66,1472	0/0:18,0:17:42.14:0,42,827	0/0:20,0:20:53.19:0,53,1017	1/1:18,0:18:29.44:393,29,0	0/1:2,6:8:0:0,0,0	0/0:25,0:25:19.84:0,20,266	0/0:11,0:11:10.59:0,11,111	0/0:8,0:8:4.05:0,4,11	1/1:19,2:21:24.08:342,24,0	1/1:14,10:24:51.16:705,51,0	0/0:30,0:30:75.23:0,75,1561	1/1:4,0:3:9.03:126,9,0	1/1:12,1:13:24.07:338,24,0	1/1:11,0:11:2.98:21,3,0	0/0:5,7:11:2.49:0,2,6	0/0:12,0:12:6.02:0,6,93	0/0:11,0:11:9.03:0,9,150	0/0:24,0:24:18.42:0,18,223	1/1:7,10:17:8.98:106,9,0	1/1:19,1:20:42.43:585,42,0	1/1:24,4:28:39.13:582,39,0	1/1:4,0:4:10.98:112,11,0
chr10	43622697	.	CCAGCCTATCTAT	C	4854.11	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=9.966;DP=506;FS=30.768;HRun=0;HaplotypeScore=219.7729;InbreedingCoeff=0.8866;MQ=51.98;MQ0=5;MQRankSum=-9.974;QD=27.74;ReadPosRankSum=5.835;VQSLOD=2.7312;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:31:62.06:0,62,1233	0/0:9,0:9:27.09:0,27,602	0/0:24,0:15:42.02:0,42,782	0/0:17,0:14:38.80:0,39,682	0/0:17,0:16:15.05:0,15,358	0/0:19,0:19:50.66:0,51,1136	0/0:24,0:24:69.24:0,69,1759	0/0:17,0:17:42.14:0,42,827	0/0:19,0:19:52.66:0,53,1114	1/1:9,11:20:31.21:508,31,0	0/1:10,0:10:0:0,0,0	0/0:24,0:24:25.86:0,26,557	0/0:14,0:14:19.62:0,20,355	0/0:11,0:11:13.08:0,13,188	1/1:21,0:21:24.08:382,24,0	1/1:24,0:24:51.17:1169,51,0	0/0:31,0:31:81.25:0,81,1970	1/1:4,0:3:9.03:147,9,0	1/1:15,0:13:27.06:475,27,0	1/1:3,10:13:5.99:60,6,0	0/0:12,0:11:2.49:0,2,6	0/0:15,0:15:6.02:0,6,164	0/0:19,0:19:21.06:0,21,424	0/0:27,0:27:24.44:0,24,545	1/1:18,0:18:7.38:203,7,0	1/1:10,13:23:41.87:850,42,0	1/1:23,0:23:45.15:950,45,0	1/1:4,0:4:10.98:112,11,0
chr10	43622755	.	TATCCATCCATCCATCC	T	281.48	PASS	AB=1.000;AC=9;AF=0.173;AN=52;BaseQRankSum=1.895;DP=548;FS=6.899;HRun=0;HaplotypeScore=247.5999;InbreedingCoeff=0.3926;MQ=46.42;MQ0=42;MQRankSum=1.673;QD=2.90;ReadPosRankSum=0.471;VQSLOD=1.3922;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:31:21.62:0,22,116	1/1:11,0:10:15.05:229,15,0	./.	./.	1/1:10,15:24:2.94:18,3,0	0/0:21,0:16:9.65:0,10,221	0/0:23,0:17:15.49:0,15,341	1/1:21,0:20:2.74:12,3,0	0/0:18,0:16:27.09:0,27,958	0/0:23,0:21:27.09:0,27,1031	0/0:17,0:16:24.97:0,25,853	0/0:36,0:32:15.51:0,16,106	0/0:20,0:20:8.35:0,8,93	0/1:16,0:15:5.33:5,0,58	0/0:23,0:22:51.16:0,51,739	0/0:33,0:30:53.70:0,54,821	0/1:20,0:20:87.05:138,0,87	0/0:10,0:7:18.06:0,18,592	0/0:13,0:11:3.01:0,3,84	0/0:18,0:17:27.09:0,27,909	0/0:18,0:11:13.76:0,14,367	0/0:14,0:10:8.82:0,9,23	0/0:24,0:20:1.44:0,1,39	0/0:33,0:29:14.10:0,14,116	0/0:20,0:19:21.54:0,22,748	0/0:25,0:23:36.08:0,36,1249	0/0:24,0:22:36.12:0,36,1070	0/1:4,0:3:6.33:6,0,199
chr10	43624514	.	A	AGAT	20619.99	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-17.356;DP=742;FS=2.354;HRun=0;HaplotypeScore=99.2752;InbreedingCoeff=0.9897;MQ=75.60;MQ0=0;MQRankSum=-5.276;QD=52.20;ReadPosRankSum=3.387;VQSLOD=7.4019;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,135,2015	1/1:0,14:15:45.15:1022,45,0	0/0:12,0:12:35.93:0,36,516	0/0:20,0:20:42.07:0,42,723	0/0:21,0:21:57.15:0,57,887	0/0:20,0:20:57.20:0,57,972	0/0:36,0:36:99:0,105,1752	1/1:3,26:32:87.15:1567,87,0	0/0:28,0:28:78.21:0,78,1268	1/1:1,25:27:72.14:1495,72,0	1/1:1,12:13:15.05:345,15,0	0/0:29,0:29:84.27:0,84,1406	0/0:30,0:30:81.26:0,81,1353	0/0:18,0:18:51.15:0,51,817	1/1:2,36:39:99:2279,99,0	1/1:3,33:36:26.81:1676,27,0	1/1:3,35:41:87.30:2004,87,0	1/1:0,20:20:51.18:1175,51,0	1/1:1,17:20:60.14:1218,60,0	1/1:0,20:21:39.13:899,39,0	1/1:6,55:63:99:3250,141,0	0/0:24,0:24:71.94:0,72,1071	0/0:23,0:23:69.17:0,69,1095	0/0:41,0:41:99:0,117,1878	1/1:3,18:21:48.16:1106,48,0	1/1:0,20:20:60.17:1268,60,0	1/1:0,23:23:48.16:1106,48,0	1/1:1,3:4:9.03:208,9,0
chr10	43624785	.	GT	G	3974.88	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=10.373;DP=525;FS=11.728;HRun=10;HaplotypeScore=61.1791;InbreedingCoeff=0.9849;MQ=82.80;MQ0=4;MQRankSum=1.900;QD=19.11;ReadPosRankSum=4.171;VQSLOD=3.8230;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:36.09:0,36,394	0/0:11,0:11:30.08:0,30,330	0/0:31,1:20:19.27:0,19,267	0/0:36,2:21:15.61:0,16,172	0/0:29,0:29:78.20:0,78,854	0/0:18,0:18:51.14:0,51,564	0/0:15,0:16:41.95:0,42,445	0/0:29,0:29:66.16:0,66,716	0/0:8,0:8:18.05:0,18,199	1/1:3,9:12:26.99:234,27,0	1/1:2,22:24:62.98:546,63,0	0/0:20,0:20:37.99:0,38,608	0/0:15,0:15:42.11:0,42,458	0/0:20,0:20:51.14:0,51,564	1/1:2,11:13:23.99:208,24,0	1/1:3,15:18:35.98:312,36,0	0/0:30,0:30:78.07:0,78,821	1/1:0,11:11:26.99:234,27,0	1/1:3,14:17:41.99:364,42,0	1/1:3,30:33:74.96:650,75,0	1/1:2,6:8:12:104,12,0	0/0:7,0:7:21.06:0,21,232	0/0:23,0:23:60.16:0,60,664	0/0:8,0:8:21.05:0,21,224	1/1:2,19:21:20.81:410,21,0	1/1:4,14:18:41.98:365,42,0	1/1:2,22:24:50.99:443,51,0	1/1:2,7:9:11.99:104,12,0
chr10	43625392	.	CTG	C	319.80	PASS	AB=0.883;AC=29;AF=0.659;AN=44;BaseQRankSum=5.234;DP=280;FS=5.550;HRun=0;HaplotypeScore=100.8258;InbreedingCoeff=0.4699;MQ=64.42;MQ0=8;MQRankSum=-2.884;QD=3.10;ReadPosRankSum=-0.913;VQSLOD=1.8525;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:30.45:0,30,511	./.	0/0:30,0:9:9.60:0,10,74	0/0:58,0:27:7.61:0,8,170	./.	0/0:19,0:19:36.08:0,36,571	0/0:19,0:19:42.03:0,42,510	0/1:8,4:11:4.58:112,0,5	0/0:16,0:16:27.07:0,27,456	1/1:0,1:1:3:28,3,0	./.	1/1:10,0:8:5.92:41,6,0	1/1:9,0:9:9.68:54,10,0	1/1:9,0:8:2.92:17,3,0	1/1:7,0:7:8.70:49,9,0	1/1:9,0:9:6.30:45,6,0	1/1:5,0:5:2.58:11,3,0	1/1:2,0:2:0.94:2,1,0	0/1:8,1:8:14.08:35,0,14	1/1:6,0:4:2.45:19,2,0	1/1:9,0:8:0.47:1,0,0	./.	./.	1/1:3,1:4:0.47:1,0,0	1/1:5,0:5:5.94:42,6,0	1/1:5,0:5:0.47:1,0,0	./.	0/1:1,0:1:0:0,0,0
chr10	43625409	.	TGTC	T	344.24	PASS	AB=0.947;AC=21;AF=0.583;AN=36;BaseQRankSum=4.616;DP=231;FS=0.000;HRun=0;HaplotypeScore=115.4081;InbreedingCoeff=0.4260;MQ=78.44;MQ0=9;MQRankSum=-4.847;QD=3.48;ReadPosRankSum=-1.169;VQSLOD=2.2481;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:38.28:0,38,236	./.	0/1:37,0:14:10.50:10,0,331	0/0:53,0:28:9.84:0,10,258	0/0:1,0:1:1.55:0,2,4	0/0:17,0:17:32.49:0,32,205	0/0:18,0:18:37.11:0,37,217	1/1:1,0:1:3.01:46,3,0	0/0:16,0:16:28.16:0,28,174	1/1:1,0:1:2.98:22,3,0	./.	0/1:11,2:11:4.04:5,0,4	1/1:6,2:8:6.99:44,7,0	1/1:4,2:5:3.01:56,3,0	1/1:3,4:7:9.03:107,9,0	1/1:4,6:10:9.02:99,9,0	1/1:4,1:5:5.97:66,6,0	./.	0/1:4,0:3:15.72:16,0,35	./.	1/1:2,0:2:0.47:1,0,0	./.	./.	1/1:3,1:4:0.47:1,0,0	./.	./.	./.	./.
chr10	43625411	.	TC	T	2520.62	PASS	AB=0.828;AC=32;AF=0.889;AN=36;BaseQRankSum=-3.882;DP=229;FS=8.468;HRun=2;HaplotypeScore=99.3962;InbreedingCoeff=0.1239;MQ=78.75;MQ0=9;MQRankSum=-0.703;QD=11.15;ReadPosRankSum=3.865;VQSLOD=1.6157;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,22:22:39.13:506,39,0	./.	0/1:33,5:14:62.65:63,0,210	0/1:45,9:29:99:162,0,198	1/1:0,1:1:3.01:39,3,0	1/1:0,17:17:33.11:428,33,0	1/1:1,17:18:42.14:545,42,0	1/1:1,0:1:3:26,3,0	1/1:1,15:16:30.10:389,30,0	1/1:1,0:1:2.22:7,2,0	./.	1/1:4,9:11:12.04:154,12,0	1/1:2,6:8:12.92:153,13,0	1/1:2,4:5:2.94:18,3,0	1/1:6,1:7:7.79:30,8,0	1/1:9,1:10:7.69:29,8,0	1/1:3,1:4:6.01:67,6,0	./.	0/1:4,0:3:1.84:2,0,15	./.	1/1:1,1:2:0.47:1,0,0	./.	./.	0/1:1,3:4:0:0,0,0	./.	./.	./.	./.
chr10	43625421	.	CTGTCTGTCT	C	507.63	PASS	AB=1.000;AC=13;AF=0.271;AN=48;BaseQRankSum=4.252;DP=248;FS=9.278;HRun=0;HaplotypeScore=126.5087;InbreedingCoeff=0.3515;MQ=78.95;MQ0=7;MQRankSum=-3.259;QD=12.69;ReadPosRankSum=1.248;VQSLOD=2.0028;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:56.93:0,57,1376	0/0:1,0:1:0:0,0,0	0/0:32,0:16:14.70:0,15,457	0/0:51,0:30:49.30:0,49,605	0/0:1,0:1:0.47:0,0,1	0/0:16,0:16:34.36:0,34,1166	0/0:22,0:22:57.06:0,57,1340	0/1:5,0:4:12.40:42,0,12	0/0:15,0:15:36.55:0,37,1058	0/1:3,0:3:12.20:54,0,12	./.	0/0:15,0:15:36.98:0,37,326	0/0:11,0:11:18.89:0,19,314	0/0:5,0:4:5.46:0,5,26	1/1:5,3:8:8:230,8,0	1/1:9,1:10:8.97:205,9,0	1/1:3,0:3:2.56:41,3,0	0/0:1,0:1:2.60:0,3,10	0/1:4,0:4:22.12:51,0,22	./.	1/1:6,0:6:0.45:1,0,0	./.	0/0:2,0:2:2.97:0,3,20	0/0:5,0:5:1.94:0,2,33	./.	0/0:1,0:1:2.50:0,2,9	0/0:4,0:4:2.80:0,3,13	1/1:1,0:1:2.88:15,3,0
chr10	43625429	.	CT	C	252.64	PASS	AB=1.000;AC=19;AF=0.413;AN=46;BaseQRankSum=4.477;DP=228;FS=16.087;HRun=10;HaplotypeScore=102.6825;InbreedingCoeff=0.5921;MQ=79.19;MQ0=3;MQRankSum=-4.368;QD=6.16;ReadPosRankSum=1.090;VQSLOD=0.5376;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:59.87:0,60,562	0/0:0,1:1:0:0,0,0	0/0:25,1:16:0.88:0,1,192	0/0:37,0:25:36.05:0,36,361	0/0:2,0:2:6.01:0,6,59	0/0:15,0:15:28.25:0,28,286	0/0:22,1:24:54.02:0,54,557	1/1:0,6:5:15:130,15,0	0/0:13,0:13:24.50:0,24,253	0/1:3,0:3:1.72:2,0,4	./.	0/0:17,0:17:43:0,43,347	0/0:11,0:11:21.06:0,21,229	0/0:5,0:5:8.43:0,8,45	1/1:3,5:8:11.96:103,12,0	1/1:3,6:10:5.93:51,6,0	1/1:1,2:3:3:26,3,0	1/1:1,0:1:3:26,3,0	1/1:4,0:4:1.54:15,2,0	./.	./.	./.	0/0:1,0:1:2.97:0,3,20	0/0:4,0:4:5.93:0,6,39	./.	1/1:1,0:1:2.22:7,2,0	1/1:3,1:4:3:25,3,0	1/1:0,1:1:2.88:15,3,0
chr10	43625430	.	T	TC	162.56	PASS	AC=12;AF=0.250;AN=48;BaseQRankSum=3.782;DP=224;FS=1.362;HRun=1;HaplotypeScore=105.7484;InbreedingCoeff=0.5666;MQ=79.83;MQ0=3;MQRankSum=-2.484;QD=11.61;ReadPosRankSum=-0.202;VQSLOD=1.7887;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:62.86:0,63,698	0/0:1,0:1:0:0,0,0	0/0:26,0:16:39.88:0,40,356	0/0:35,0:24:32.25:0,32,461	0/0:2,0:2:6.01:0,6,68	0/0:15,0:15:34.28:0,34,403	0/0:24,0:24:66.01:0,66,768	0/0:7,0:6:12.19:0,12,47	0/0:13,0:13:33.44:0,33,376	1/1:1,2:3:2.52:66,3,0	./.	0/0:16,0:16:42.98:0,43,388	0/0:9,0:9:21.07:0,21,284	0/0:4,0:4:8.43:0,8,45	0/0:8,0:8:1.80:0,2,29	0/0:11,0:11:8.51:0,9,45	0/0:3,0:3:0.50:0,0,1	1/1:0,1:1:3:27,3,0	1/1:1,3:4:5.40:103,5,0	./.	0/0:1,4:5:0.47:0,0,1	./.	0/0:1,0:1:2.97:0,3,20	0/0:3,0:3:5.93:0,6,39	./.	1/1:0,1:1:3.01:37,3,0	1/1:1,3:4:2.99:25,3,0	1/1:1,0:1:3.01:34,3,0
chr10	43627109	.	GCTC	G	307.60	PASS	AB=0.935;AC=5;AF=0.089;AN=56;BaseQRankSum=5.809;DP=285;FS=30.841;HRun=0;HaplotypeScore=49.6022;InbreedingCoeff=0.2766;MQ=83.08;MQ0=1;MQRankSum=-0.417;QD=6.41;ReadPosRankSum=7.315;VQSLOD=0.4844;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:11:20.94:0,21,216	0/1:11,0:11:27.85:28,0,97	0/0:14,0:12:28.17:0,28,248	0/0:13,0:12:19.97:0,20,195	0/0:12,0:12:23.75:0,24,228	0/0:16,0:16:42.01:0,42,551	0/0:12,0:12:27.92:0,28,322	0/0:13,0:13:36.06:0,36,384	0/0:8,0:10:10.79:0,11,80	0/0:5,0:5:15.02:0,15,183	0/0:5,0:5:11.22:0,11,99	0/0:15,0:15:35.96:0,36,471	0/0:8,0:8:14.96:0,15,165	0/0:8,0:8:18.03:0,18,227	0/1:14,2:16:61.59:158,0,62	1/1:7,3:10:14.61:144,15,0	0/1:10,1:11:53.11:98,0,53	0/0:7,0:7:18.03:0,18,254	0/0:10,0:11:20.95:0,21,234	0/0:11,0:11:23.97:0,24,273	0/0:7,0:7:21.02:0,21,254	0/0:8,0:8:11.97:0,12,123	0/0:6,0:6:9.90:0,10,126	0/0:11,0:11:27.03:0,27,346	0/0:12,0:12:28.18:0,28,273	0/0:5,0:5:8.96:0,9,107	0/0:11,0:11:29.82:0,30,327	0/0:5,0:5:15.04:0,15,212
chr10	43628224	.	GTTTTTTT	G	3910.52	PASS	AB=0.786;AC=26;AF=0.500;AN=52;BaseQRankSum=2.298;DP=275;FS=32.296;HRun=16;HaplotypeScore=76.5856;InbreedingCoeff=0.3893;MQ=42.84;MQ0=32;MQRankSum=0.691;QD=25.07;ReadPosRankSum=3.326;VQSLOD=-0.6543;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:14:33:0,33,569	0/0:0,0:2:2.33:0,2,39	./.	./.	0/0:1,0:11:3.62:0,4,100	0/0:9,0:11:21.06:0,21,579	0/0:3,0:3:5.92:0,6,39	0/0:7,0:7:5.24:0,5,21	0/0:5,0:6:9.03:0,9,273	1/1:1,13:14:39.10:716,39,0	1/1:3,12:15:32.88:483,33,0	0/1:6,0:10:86:236,0,86	0/1:4,0:8:32.02:123,0,32	1/1:0,0:2:6.02:82,6,0	0/0:7,0:7:15.03:0,15,259	0/0:10,0:9:12:0,12,119	0/0:12,0:14:14.99:0,15,174	1/1:5,5:10:4.96:67,5,0	0/1:4,4:6:27.46:201,0,27	1/1:3,11:13:26.95:467,27,0	1/1:4,5:9:5.88:122,6,0	0/1:6,0:7:26.51:27,0,73	0/1:10,0:10:32.32:32,0,203	0/1:7,0:9:5.24:5,0,167	1/1:1,5:6:12.02:245,12,0	1/1:2,10:13:30.07:520,30,0	1/1:3,9:13:20.88:408,21,0	1/1:1,6:7:9.03:175,9,0
chr10	43628232	.	TTTTTTTTTG	T	967.10	PASS	AB=1.000;AC=17;AF=0.327;AN=52;BaseQRankSum=6.075;DP=270;FS=19.176;HRun=0;HaplotypeScore=104.3337;InbreedingCoeff=-0.1929;MQ=39.46;MQ0=35;MQRankSum=-1.166;QD=7.16;ReadPosRankSum=4.948;VQSLOD=0.5060;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:29.24:0,29,537	0/1:3,0:3:29.09:31,0,29	./.	./.	0/0:13,0:13:21.33:0,21,299	0/0:13,0:13:26.97:0,27,915	0/0:3,0:3:8.94:0,9,110	0/0:5,0:2:1.35:0,1,4	0/0:5,0:5:12.04:0,12,417	0/1:17,0:16:57.82:88,0,58	0/1:15,0:15:31.81:32,0,59	0/1:11,0:10:99:276,0,109	0/1:8,0:8:21.16:159,0,21	1/1:2,0:2:6.02:110,6,0	0/0:9,0:9:11.75:0,12,232	0/0:10,0:9:11.94:0,12,90	0/0:9,8:15:17.62:0,18,134	0/0:11,0:11:0.20:0,0,125	0/1:7,0:5:23.42:39,0,23	0/1:14,0:13:55.09:55,0,67	0/1:7,0:7:9.84:10,0,70	0/1:5,0:5:9.87:10,0,74	0/1:9,0:9:4.38:4,0,264	0/0:9,0:9:10.31:0,10,238	0/1:6,0:6:21.28:29,0,21	0/1:12,0:12:18.32:126,0,18	0/1:12,0:12:12.76:70,0,13	1/1:7,0:7:8.37:79,8,0
chr10	43628245	.	GTTTGTTTGTTTGTT	G	1673.13	PASS	AB=0.900;AC=12;AF=0.240;AN=50;BaseQRankSum=3.324;DP=252;FS=0.000;HRun=0;HaplotypeScore=119.6203;InbreedingCoeff=0.6052;MQ=36.72;MQ0=24;MQRankSum=-3.918;QD=32.81;ReadPosRankSum=0.406;VQSLOD=2.6681;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:14.94:0,15,477	0/0:3,0:3:9.03:0,9,242	./.	./.	0/0:12,0:11:20.56:0,21,859	0/0:11,0:11:24:0,24,1314	0/0:2,0:2:6.02:0,6,213	0/0:8,0:4:8.96:0,9,154	0/0:4,0:4:9.03:0,9,428	0/0:18,0:17:45.13:0,45,1110	0/0:16,0:16:18.90:0,19,481	1/1:7,5:11:7.19:641,7,0	1/1:3,4:7:18.06:519,18,0	1/1:0,2:2:6.02:235,6,0	1/1:8,0:8:12.48:162,12,0	./.	0/0:18,0:15:24.05:0,24,507	0/0:13,0:11:14.53:0,15,370	0/0:6,0:6:6.02:0,6,161	0/0:12,0:11:23.11:0,23,615	0/0:8,0:7:15.05:0,15,355	0/1:3,1:4:26.19:92,0,26	0/1:9,0:9:26.19:101,0,26	1/1:7,2:9:5.95:80,6,0	0/0:6,0:6:15.01:0,15,294	0/0:13,0:13:23.94:0,24,572	0/0:11,0:11:24.22:0,24,414	0/0:8,0:7:7.26:0,7,68
chr10	43628257	.	GTT	G	774.98	PASS	AB=0.784;AC=13;AF=0.260;AN=50;BaseQRankSum=1.957;DP=228;FS=0.000;HRun=5;HaplotypeScore=70.1423;InbreedingCoeff=0.2594;MQ=31.54;MQ0=24;MQRankSum=-2.510;QD=10.33;ReadPosRankSum=3.490;VQSLOD=-0.5975;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:16.98:0,17,191	1/1:2,2:3:7.17:42,7,0	./.	./.	0/0:11,0:10:20.52:0,21,251	0/0:11,0:11:24.04:0,24,394	0/0:5,0:5:12:0,12,164	0/1:10,0:6:15.08:25,0,15	0/0:4,0:4:9.03:0,9,161	0/0:18,0:17:45.11:0,45,572	0/0:12,0:12:18.90:0,19,215	0/1:8,2:9:25.59:173,0,26	0/1:4,3:7:1.58:158,0,2	1/1:2,0:2:6.01:62,6,0	0/1:5,3:8:22.30:126,0,22	./.	1/1:13,4:14:25:165,25,0	0/0:9,0:8:16.60:0,17,235	0/0:4,0:3:9.02:0,9,108	0/0:10,0:9:23.10:0,23,284	0/0:8,0:7:15.05:0,15,208	0/1:2,1:3:32.65:33,0,46	0/1:4,3:7:49.98:71,0,50	0/1:5,2:7:10.61:75,0,11	0/0:5,0:5:15.01:0,15,169	0/0:8,0:8:23.75:0,24,286	0/0:10,0:10:26.70:0,27,268	0/0:7,0:6:9.02:0,9,107
chr10	43628333	.	A	AG	243.30	PASS	AC=14;AF=1.000;AN=14;DP=29;FS=0.000;HRun=1;HaplotypeScore=8.2355;MQ=20.39;MQ0=2;QD=20.28;VQSLOD=3.3906;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	./.	./.	./.	1/1:1,1:2:6.02:83,6,0	./.	1/1:1,1:2:3.01:45,3,0	./.	./.	1/1:0,2:2:3.01:35,3,0	./.	1/1:1,0:1:3.01:35,3,0	./.	./.	./.	1/1:1,1:1:3.01:45,3,0	./.	1/1:0,1:1:3.01:35,3,0	./.	1/1:1,1:2:3.01:33,3,0	./.	./.	./.	./.	./.
chr10	43628678	.	A	AG	424.34	PASS	AC=18;AF=0.900;AN=20;BaseQRankSum=-2.293;DP=129;FS=8.751;HRun=1;HaplotypeScore=21.5428;InbreedingCoeff=0.1985;MQ=35.30;MQ0=3;MQRankSum=-2.293;QD=8.01;ReadPosRankSum=-2.123;VQSLOD=-0.6326;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:2,0:2:5.59:0,6,36	./.	./.	./.	./.	./.	./.	1/1:0,3:2:3.01:45,3,0	./.	./.	./.	./.	./.	1/1:1,5:3:6.02:80,6,0	1/1:0,5:3:6.02:90,6,0	./.	1/1:0,3:1:3.01:45,3,0	1/1:0,6:2:6.02:71,6,0	./.	1/1:0,9:3:6.02:67,6,0	1/1:1,4:1:3.01:33,3,0	./.	1/1:2,7:4:3.01:35,3,0	./.	1/1:0,7:2:3.01:42,3,0	./.
chr10	43628742	.	GTTTGTTTGTTTGTT	G	701.10	PASS	AB=0.969;AC=12;AF=0.240;AN=50;BaseQRankSum=-0.562;DP=235;FS=0.000;HRun=0;HaplotypeScore=87.3454;InbreedingCoeff=0.3444;MQ=26.02;MQ0=53;MQRankSum=-1.843;QD=13.48;ReadPosRankSum=-0.892;VQSLOD=1.0388;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:17:24.08:0,24,753	0/0:9,0:8:21.07:0,21,512	./.	./.	0/0:9,0:6:9.50:0,10,467	./.	0/0:6,0:5:11.94:0,12,165	0/0:17,0:4:9.03:0,9,187	0/0:8,0:5:2.98:0,3,328	0/0:12,0:11:33.10:0,33,884	0/0:7,0:7:18.06:0,18,521	1/1:6,1:4:6.02:179,6,0	0/1:6,1:4:10.96:161,0,11	1/1:2,2:3:6.02:235,6,0	1/1:2,0:2:2.06:10,2,0	0/0:7,0:5:8.18:0,8,68	0/1:12,0:8:20.80:21,0,133	0/0:7,0:7:12.04:0,12,415	0/0:10,0:6:18.06:0,18,469	0/0:7,0:5:15.05:0,15,413	0/0:4,0:2:3.01:0,3,37	0/1:8,0:6:22.59:112,0,23	0/1:2,0:2:10.94:56,0,11	1/1:9,1:2:5.93:70,6,0	0/0:7,0:6:15.05:0,15,424	0/0:10,0:8:24.08:0,24,627	0/0:14,0:13:33.01:0,33,1008	0/0:6,0:5:11.88:0,12,370
chr10	43628746	.	G	GTT	357.57	PASS	AB=0.923;AC=4;AF=0.083;AN=48;BaseQRankSum=1.488;DP=235;FS=0.000;HRun=3;HaplotypeScore=60.3619;InbreedingCoeff=0.3145;MQ=27.53;MQ0=51;MQRankSum=-3.551;QD=13.75;ReadPosRankSum=1.394;VQSLOD=0.5822;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:18:24.08:0,24,311	1/1:3,6:8:21.06:245,21,0	./.	./.	0/0:9,0:6:8.91:0,9,106	./.	0/0:7,0:6:7.83:0,8,76	0/0:18,0:6:14.84:0,15,124	0/0:8,0:5:11.90:0,12,141	0/0:13,0:12:18.88:0,19,335	0/0:7,0:7:18.04:0,18,227	0/0:6,0:4:2.69:0,3,17	0/0:7,0:4:5.78:0,6,68	0/0:3,0:3:5.85:0,6,34	0/0:3,0:3:6.02:0,6,81	0/1:6,0:5:8.02:47,0,8	0/1:9,2:8:5.52:175,0,6	0/0:8,0:8:14.94:0,15,160	0/0:11,0:7:21.04:0,21,262	0/0:7,0:5:15.02:0,15,175	./.	0/0:9,0:7:5.49:0,5,83	0/0:2,0:2:2.56:0,3,41	0/0:9,0:2:2.50:0,2,9	0/0:7,0:7:18.03:0,18,192	0/0:8,0:8:18.32:0,18,264	0/0:15,0:14:16.12:0,16,398	0/0:6,0:5:12.04:0,12,167
chr10	43629668	.	GT	G	899.59	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.726;DP=787;FS=0.743;HRun=3;HaplotypeScore=76.0834;InbreedingCoeff=0.9905;MQ=76.39;MQ0=0;MQRankSum=-2.512;QD=32.13;ReadPosRankSum=0.059;VQSLOD=3.6354;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:59,0:59:99:0,178,2591	0/0:9,0:9:27.09:0,27,403	0/0:21,0:21:58.24:0,58,736	0/0:13,0:13:30.21:0,30,417	1/1:0,28:28:78.24:994,78,0	0/0:27,0:27:81.27:0,81,1212	0/0:22,0:22:66.22:0,66,984	0/0:32,0:32:96.33:0,96,1439	0/0:27,0:27:81.27:0,81,1214	0/0:35,0:35:99:0,105,1574	0/0:17,0:17:51.17:0,51,761	0/0:34,0:34:99:0,102,1526	0/0:36,0:36:99:0,108,1575	0/0:29,0:29:87.28:0,87,1282	0/0:48,0:48:99:0,144,2116	0/0:50,0:50:99:0,151,2249	0/0:18,0:18:54.18:0,54,806	0/0:18,0:18:51.17:0,51,763	0/0:22,0:22:63.21:0,63,942	0/0:17,0:17:45.15:0,45,673	0/0:44,0:44:99:0,129,1931	0/0:33,0:33:96.33:0,96,1437	0/0:26,0:26:78.25:0,78,1136	0/0:29,0:29:87.28:0,87,1283	0/0:22,0:22:66.21:0,66,967	0/0:37,0:36:99:0,105,1574	0/0:28,0:28:81.23:0,81,1186	0/0:6,0:6:18.04:0,18,249
chr10	43630227	.	T	TTC	3610.76	PASS	AB=0.887;AC=31;AF=0.596;AN=52;BaseQRankSum=2.794;DP=644;FS=18.263;HRun=0;HaplotypeScore=150.6388;InbreedingCoeff=0.3124;MQ=62.63;MQ0=13;MQRankSum=-4.165;QD=8.85;ReadPosRankSum=-1.855;VQSLOD=1.5467;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:31:1.66:0,2,119	0/1:0,0:4:5.86:6,0,19	./.	./.	1/1:14,0:32:11.67:113,12,0	0/0:26,0:25:32.97:0,33,353	0/0:19,0:18:8.98:0,9,87	0/0:26,0:37:12.88:0,13,147	0/0:19,0:19:36.08:0,36,387	1/1:20,10:28:38.27:411,38,0	0/1:17,0:16:16.99:29,0,17	1/1:12,0:13:1.32:138,1,0	1/1:6,0:20:18.01:169,18,0	1/1:5,0:14:6:52,6,0	0/1:22,0:22:84.64:85,0,100	0/0:33,0:33:48.44:0,48,286	0/0:11,0:21:7.71:0,8,44	1/1:14,3:17:20.99:248,21,0	1/1:13,3:15:11.97:127,12,0	0/1:16,7:22:3.80:337,0,4	1/1:15,3:18:9.03:120,9,0	1/1:13,0:30:14.03:215,14,0	1/1:8,1:22:11.97:119,12,0	0/1:16,0:21:35.09:52,0,35	0/1:28,1:29:55.52:56,0,129	1/1:21,14:35:0.20:608,0,0	1/1:21,6:25:14.11:522,14,0	0/1:8,8:15:76.82:204,0,77
chr10	43630283	.	CAGA	C	1593.15	PASS	AB=0.801;AC=10;AF=0.179;AN=56;BaseQRankSum=5.686;DP=482;FS=20.421;HRun=0;HaplotypeScore=120.7040;InbreedingCoeff=-0.0068;MQ=52.01;MQ0=6;MQRankSum=-7.928;QD=9.77;ReadPosRankSum=-1.982;VQSLOD=1.3444;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:81.28:0,81,1978	0/0:4,0:4:12.04:0,12,293	0/0:17,0:6:17.65:0,18,315	0/0:13,0:7:18.06:0,18,420	0/1:18,0:18:53.65:54,0,1056	0/0:17,0:17:48.16:0,48,1172	0/0:11,0:11:33.10:0,33,763	0/0:20,0:19:57.15:0,57,1359	0/0:12,0:12:36.11:0,36,825	0/1:21,4:24:99:102,0,1317	0/1:15,2:17:7.62:8,0,1034	0/0:16,0:16:34.67:0,35,797	0/0:18,0:18:5.54:0,6,806	0/0:10,0:10:27.09:0,27,661	0/0:21,0:20:57.20:0,57,1392	0/0:27,0:27:69.24:0,69,1628	0/0:19,0:19:41.88:0,42,968	0/1:9,7:16:99:182,0,481	0/0:20,1:20:50.95:0,51,1325	0/1:8,3:11:99:164,0,484	0/0:8,1:9:1.17:0,1,565	0/0:22,0:22:21.15:0,21,1235	0/0:16,0:16:32.78:0,33,804	0/0:17,0:17:42.14:0,42,1028	0/1:13,8:21:99:305,0,827	0/1:15,9:23:99:405,0,965	0/1:17,8:24:99:241,0,1089	1/1:0,5:5:15.05:279,15,0
chr10	43630318	.	C	CT	1277.78	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=0.924;DP=466;FS=0.680;HRun=1;HaplotypeScore=66.7231;InbreedingCoeff=0.9040;MQ=55.19;MQ0=1;MQRankSum=1.972;QD=32.76;ReadPosRankSum=-0.538;VQSLOD=3.1078;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:69.20:0,69,879	0/0:5,0:5:15.05:0,15,195	0/0:17,0:10:27.08:0,27,336	0/0:16,0:12:30.09:0,30,376	0/0:12,0:12:33.09:0,33,413	0/0:18,0:18:45.13:0,45,570	0/0:11,0:11:33.11:0,33,429	0/0:34,0:34:93.30:0,93,1206	0/0:15,0:15:42.14:0,42,545	0/0:21,0:20:57.18:0,57,739	0/0:16,0:16:42.13:0,42,532	0/0:13,0:13:33.11:0,33,428	0/0:12,0:12:33.11:0,33,429	0/0:17,0:17:39.13:0,39,506	1/1:0,17:16:42.14:629,42,0	1/1:1,21:22:18.24:768,18,0	0/0:17,0:17:33.11:0,33,428	0/0:18,0:18:51.17:0,51,662	0/0:22,0:21:60.19:0,60,777	0/0:11,0:11:30.10:0,30,389	0/0:19,0:18:45.11:0,45,552	0/0:18,0:18:51.15:0,51,648	0/0:15,0:15:39.13:0,39,505	0/0:21,0:21:57.19:0,57,740	0/0:14,0:14:39.13:0,39,506	0/0:18,0:18:51.16:0,51,648	0/0:20,0:20:57.19:0,57,739	0/0:1,0:1:3.01:0,3,39
chr10	43630501	.	C	CT	3686.34	PASS	AC=54;AF=0.964;AN=56;BaseQRankSum=-2.218;DP=442;FS=2.937;HRun=6;HaplotypeScore=53.6890;InbreedingCoeff=0.3244;MQ=54.19;MQ0=35;MQRankSum=-0.011;QD=8.93;ReadPosRankSum=0.053;VQSLOD=0.0894;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,15:19:9.03:109,9,0	1/1:2,2:4:11.97:121,12,0	1/1:24,4:3:6.02:75,6,0	0/0:29,0:5:5.87:0,6,40	1/1:9,12:21:18.52:210,19,0	1/1:9,9:18:8.86:88,9,0	1/1:5,9:14:3.90:39,4,0	1/1:9,11:17:30.09:357,30,0	1/1:4,8:12:3.01:38,3,0	1/1:5,11:14:24.04:256,24,0	1/1:4,14:16:21.81:207,22,0	1/1:3,7:10:17.72:182,18,0	1/1:3,9:11:3.01:35,3,0	1/1:13,2:15:5.98:56,6,0	1/1:8,2:10:24.05:273,24,0	1/1:7,14:21:22.01:261,22,0	1/1:3,12:15:12.03:136,12,0	1/1:3,12:15:9.03:110,9,0	1/1:9,4:13:12.92:151,13,0	1/1:11,10:20:21.95:226,22,0	1/1:5,0:5:12.04:148,12,0	1/1:3,11:14:11.93:105,12,0	1/1:6,12:18:8.88:96,9,0	1/1:6,17:23:4.35:26,4,0	1/1:11,0:11:0.47:1,0,0	1/1:4,7:11:21.52:246,22,0	1/1:4,10:14:8.98:95,9,0	1/1:11,1:9:3.01:38,3,0
chr10	43630802	.	T	TA	24185.54	PASS	AB=0.736;AC=54;AF=0.964;AN=56;BaseQRankSum=-5.128;DP=609;FS=19.092;HRun=1;HaplotypeScore=167.0973;InbreedingCoeff=-0.0377;MQ=71.14;MQ0=1;MQRankSum=-7.478;QD=39.71;ReadPosRankSum=4.775;VQSLOD=2.3044;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,39:39:87.30:1387,87,0	1/1:0,10:10:30.10:479,30,0	0/1:15,11:26:99:552,0,165	0/1:14,5:19:99:287,0,211	1/1:3,30:33:84.26:1293,84,0	1/1:0,20:20:54.18:861,54,0	1/1:2,34:35:99:1552,99,0	1/1:0,37:37:99:1751,111,0	1/1:0,23:23:63.17:976,63,0	1/1:2,24:26:72.25:1143,72,0	1/1:1,17:18:36.12:574,36,0	1/1:0,32:32:81.28:1291,81,0	1/1:2,15:17:51.17:813,51,0	1/1:0,22:21:60.20:956,60,0	1/1:1,24:25:72.25:1148,72,0	1/1:0,28:28:84.29:1340,84,0	1/1:2,20:21:54.18:861,54,0	1/1:1,12:13:36.12:560,36,0	1/1:2,15:17:45.14:695,45,0	1/1:0,17:17:45.15:719,45,0	1/1:0,15:15:33.11:527,33,0	1/1:0,14:14:33.11:527,33,0	1/1:1,15:17:38.80:605,39,0	1/1:0,25:25:60.20:955,60,0	1/1:0,8:8:18.06:287,18,0	1/1:1,21:22:60.20:951,60,0	1/1:0,19:20:51:808,51,0	1/1:0,7:7:18.06:287,18,0
chr10	43631029	.	GTTGACCAGCTACT	G	8825.58	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=13.436;DP=555;FS=3.386;HRun=0;HaplotypeScore=201.5320;InbreedingCoeff=0.9639;MQ=85.77;MQ0=0;MQRankSum=-11.899;QD=64.89;ReadPosRankSum=1.398;VQSLOD=4.7590;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,117,6943	0/0:11,0:11:33.11:0,33,2091	0/0:23,0:23:44.84:0,45,2032	0/0:19,0:19:38.31:0,38,2183	0/0:20,0:20:57.20:0,57,3512	0/0:11,0:11:30.10:0,30,1614	0/0:26,0:26:78.27:0,78,4570	0/0:34,0:34:96.32:0,96,5102	0/0:22,0:22:66.17:0,66,3748	1/1:1,10:11:30.07:1023,30,0	1/1:0,10:10:15.05:599,15,0	0/0:21,0:21:60.20:0,60,3599	0/0:21,0:21:57.20:0,57,3737	0/0:19,0:19:57.13:0,57,3570	0/0:19,0:19:57.18:0,57,3502	0/0:29,0:29:87.28:0,87,5227	0/0:34,0:34:96.33:0,96,6105	1/1:0,9:9:15:498,15,0	1/1:2,7:9:21.05:638,21,0	1/1:1,12:13:15.05:599,15,0	1/1:2,18:20:3.01:120,3,0	0/0:8,0:8:21.07:0,21,1365	0/0:13,0:13:33.10:0,33,1958	0/0:43,0:43:99:0,120,7255	1/1:0,15:15:33.11:1317,33,0	1/1:1,17:18:42.14:1518,42,0	1/1:1,22:23:45.15:1794,45,0	1/1:0,8:8:18.06:719,18,0
chr10	43631454	.	TAA	T	5691.13	PASS	AB=0.777;AC=32;AF=0.571;AN=56;BaseQRankSum=0.756;DP=565;FS=10.205;HRun=13;HaplotypeScore=95.2429;InbreedingCoeff=0.8213;MQ=81.14;MQ0=8;MQRankSum=-3.390;QD=16.12;ReadPosRankSum=2.551;VQSLOD=3.2239;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:84.17:0,84,1150	1/1:1,5:6:15.02:145,15,0	0/0:63,1:35:4.17:0,4,254	0/1:65,1:28:26.16:26,0,160	0/0:18,0:22:38.03:0,38,434	0/0:16,0:17:13.45:0,13,445	0/0:11,0:11:30.09:0,30,416	1/1:4,26:30:78.11:756,78,0	0/0:14,0:17:38.61:0,39,515	1/1:3,16:19:48.03:455,48,0	1/1:4,17:21:41.98:457,42,0	0/0:4,0:10:23.95:0,24,141	0/0:0,0:7:17.47:0,17,60	0/0:4,0:12:17.34:0,17,59	1/1:2,0:15:27.43:119,27,0	1/1:1,0:22:49.39:215,49,0	1/1:3,18:21:54.07:524,54,0	1/1:4,12:19:35.45:364,35,0	1/1:2,9:13:23.66:259,24,0	1/1:0,15:16:41.07:385,41,0	1/1:2,11:13:21.02:204,21,0	0/1:2,2:7:12.22:45,0,12	0/0:1,0:10:17.47:0,17,60	0/0:1,1:8:17.47:0,17,61	1/1:7,17:23:48.01:465,48,0	1/1:3,19:22:54.04:516,54,0	1/1:5,23:27:66.08:640,66,0	1/1:4,5:8:11.96:116,12,0
chr10	43633435	.	C	CG	1798.77	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=-6.139;DP=516;FS=7.091;HRun=5;HaplotypeScore=65.5602;InbreedingCoeff=0.8674;MQ=62.04;MQ0=26;MQRankSum=2.101;QD=15.78;ReadPosRankSum=1.726;VQSLOD=2.8963;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:62.66:0,63,607	0/0:11,0:11:26.94:0,27,246	0/0:21,0:12:4:0,4,93	0/1:13,0:3:21.64:22,0,24	0/0:20,0:19:51:0,51,503	0/0:13,0:13:35.92:0,36,326	0/0:18,0:17:36.01:0,36,343	0/0:27,0:25:47.67:0,48,409	0/0:21,0:20:47:0,47,435	0/0:15,0:15:38.71:0,39,286	0/0:12,0:12:32.72:0,33,240	1/1:6,11:15:27.09:354,27,0	1/1:4,13:16:27.07:330,27,0	1/1:4,11:14:19.30:239,19,0	0/0:26,0:25:59.77:0,60,458	0/0:20,0:18:26.90:0,27,208	0/0:28,0:28:61.61:0,62,694	0/0:8,0:8:20.93:0,21,168	0/0:15,0:13:29.88:0,30,229	0/0:22,0:20:50.64:0,51,371	0/0:14,0:13:29.74:0,30,214	1/1:1,7:8:14.62:167,15,0	1/1:4,18:22:31.73:373,32,0	1/1:2,20:22:39.12:502,39,0	0/0:21,0:19:32.22:0,32,220	0/0:23,0:23:56.86:0,57,458	0/0:25,0:23:59.72:0,60,449	0/0:14,0:14:29.84:0,30,221
chr10	43633440	.	GA	G	2752.56	PASS	AB=0.742;AC=23;AF=0.411;AN=56;BaseQRankSum=0.208;DP=514;FS=10.452;HRun=12;HaplotypeScore=57.5460;InbreedingCoeff=0.6762;MQ=66.64;MQ0=24;MQRankSum=1.272;QD=10.88;ReadPosRankSum=1.455;VQSLOD=2.0597;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:68.85:0,69,641	0/0:10,0:10:21.03:0,21,207	0/0:22,0:12:25.18:0,25,206	0/1:20,0:9:35.08:35,0,37	0/0:23,0:22:56.96:0,57,534	0/1:12,3:15:13.40:13,0,224	0/0:14,0:14:27.03:0,27,261	0/0:25,0:22:41.98:0,42,397	0/0:17,1:18:12.85:0,13,312	1/1:4,11:15:31.94:248,32,0	0/1:6,7:13:0.82:134,0,1	0/0:12,0:10:26.70:0,27,177	0/0:13,0:14:26.42:0,26,163	0/0:15,0:14:23.46:0,23,147	1/1:5,20:25:49.81:377,50,0	1/1:6,11:15:17.93:139,18,0	0/0:28,0:28:74.95:0,75,730	0/1:2,5:7:12.63:98,0,13	1/1:10,9:18:47.72:356,48,0	1/1:4,17:20:37.12:283,37,0	1/1:5,7:12:28.91:215,29,0	0/0:9,0:9:19.10:0,19,131	0/0:21,0:21:35.28:0,35,225	0/0:20,0:21:38.38:0,38,248	0/1:9,11:18:8.15:98,0,8	1/1:7,19:27:58.53:414,59,0	1/1:7,18:23:47.77:367,48,0	1/1:2,12:14:23.91:185,24,0
chr10	43634990	.	C	CT	713.62	PASS	AB=1.000;AC=17;AF=0.850;AN=20;BaseQRankSum=0.777;DP=180;FS=0.000;HRun=12;HaplotypeScore=35.4008;InbreedingCoeff=0.4343;MQ=20.66;MQ0=101;MQRankSum=-1.071;QD=8.81;ReadPosRankSum=-0.945;VQSLOD=1.1982;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	0/0:3,0:3:7.78:0,8,49	./.	./.	0/1:12,0:9:0:0,0,0	./.	./.	./.	./.	1/1:3,1:3:3:29,3,0	1/1:8,8:16:5.06:190,5,0	./.	1/1:2,0:1:1.25:3,1,0	./.	./.	./.	./.	./.	./.	1/1:9,11:19:19.98:322,20,0	./.	1/1:2,0:6:5.90:37,6,0	1/1:1,0:2:4.20:22,4,0	./.	1/1:3,5:7:15.02:146,15,0	1/1:4,3:4:5.96:49,6,0	./.	./.
chr10	43635008	.	TTTTA	T	667.99	PASS	AC=10;AF=0.556;AN=18;BaseQRankSum=2.550;DP=160;FS=0.000;HRun=0;HaplotypeScore=27.9546;MQ=17.45;MQ0=105;MQRankSum=-1.194;QD=15.18;ReadPosRankSum=2.292;VQSLOD=2.7196;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:2:3.01:0,3,75	0/0:4,0:3:9.03:0,9,229	./.	./.	0/0:8,0:6:9.03:0,9,229	./.	./.	./.	./.	1/1:1,1:2:3.01:53,3,0	1/1:7,9:14:6.02:101,6,0	./.	./.	./.	./.	./.	./.	./.	./.	1/1:5,8:12:21.07:354,21,0	./.	0/0:2,0:2:3.01:0,3,76	./.	./.	1/1:3,6:7:9.03:155,9,0	1/1:2,2:2:6.02:105,6,0	./.	./.
chr10	43635498	.	AT	A	683.74	PASS	AC=14;AF=0.318;AN=44;BaseQRankSum=0.301;DP=371;FS=0.000;HRun=3;HaplotypeScore=28.8264;InbreedingCoeff=0.6645;MQ=22.43;MQ0=188;MQRankSum=2.837;QD=7.35;ReadPosRankSum=-0.587;VQSLOD=0.2910;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:2:3.01:0,3,40	0/0:7,0:5:11.19:0,11,52	./.	./.	0/0:16,0:8:12.83:0,13,113	0/0:11,0:6:7.20:0,7,59	0/0:17,0:7:14.91:0,15,138	0/0:15,0:1:2.99:0,3,24	0/0:7,0:2:3.01:0,3,40	1/1:16,1:14:29.74:262,30,0	1/1:12,0:8:5.98:46,6,0	0/0:10,0:5:4.21:0,4,23	0/0:16,0:11:11.90:0,12,100	0/0:13,0:8:5.46:0,5,26	0/0:14,0:3:1.25:0,1,3	0/0:14,0:7:6.96:0,7,35	0/0:12,0:4:2.80:0,3,13	./.	./.	1/1:18,0:14:17.78:139,18,0	./.	0/0:19,0:15:15.94:0,16,130	0/0:8,0:7:9.94:0,10,53	./.	1/1:13,0:11:21.15:140,21,0	1/1:8,1:6:14.97:134,15,0	1/1:18,0:13:11.94:95,12,0	1/1:6,0:2:3:25,3,0
chr10	43635500	.	TTA	T	902.55	PASS	AB=0.588;AC=17;AF=0.386;AN=44;BaseQRankSum=1.430;DP=370;FS=0.000;HRun=0;HaplotypeScore=28.9616;InbreedingCoeff=0.5928;MQ=22.93;MQ0=180;MQRankSum=2.869;QD=7.92;ReadPosRankSum=0.306;VQSLOD=2.7851;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:2:3.01:0,3,55	1/1:7,0:5:6.22:15,6,0	./.	./.	0/0:14,0:8:14.93:0,15,167	0/0:11,0:6:9.01:0,9,112	0/0:19,0:8:15.38:0,15,169	0/0:17,0:1:2.99:0,3,24	0/0:8,0:3:3.01:0,3,55	1/1:3,14:16:10.53:279,11,0	1/1:0,11:8:6.02:80,6,0	0/0:9,0:5:5.96:0,6,44	0/0:15,0:10:11.91:0,12,115	0/0:13,0:8:8.95:0,9,68	0/0:14,0:3:2.99:0,3,23	0/0:14,0:8:2.95:0,3,34	1/1:13,0:4:1.53:4,2,0	./.	./.	1/1:3,15:16:17.85:221,18,0	./.	0/0:20,0:15:12.90:0,13,168	0/0:8,0:7:6.65:0,7,57	./.	1/1:5,6:11:20.26:178,20,0	0/1:3,6:7:3.21:109,0,3	1/1:2,13:13:11.97:129,12,0	1/1:3,3:2:3.01:41,3,0
chr10	43635736	.	G	GCC	2870.12	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=11.815;DP=780;FS=4.966;HRun=0;HaplotypeScore=92.0837;InbreedingCoeff=0.8998;MQ=54.68;MQ0=5;MQRankSum=-2.158;QD=47.05;ReadPosRankSum=4.283;VQSLOD=5.1358;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,144,2290	0/0:9,0:9:27.09:0,27,440	0/0:29,0:3:6.02:0,6,72	0/0:22,0:3:6.02:0,6,77	0/0:41,0:41:99:0,111,1786	0/0:18,0:17:54.18:0,54,880	0/0:32,0:32:87.28:0,87,1394	0/0:35,0:35:99:0,105,1687	0/0:39,0:39:99:0,111,1784	0/0:41,0:41:99:0,120,1932	0/0:20,0:20:48.12:0,48,750	0/0:30,0:30:87.25:0,87,1379	0/0:31,0:31:87.30:0,87,1419	0/0:27,0:27:75.26:0,75,1221	1/1:1,34:35:96.26:1783,96,0	1/1:1,25:25:63.19:1208,63,0	0/0:32,0:32:96.33:0,96,1566	0/0:12,0:12:36.12:0,36,587	0/0:26,0:23:69.24:0,69,1115	0/0:25,0:25:72.25:0,72,1174	0/0:38,0:38:99:0,114,1854	0/0:29,0:29:84.20:0,84,1311	0/0:17,0:17:45.15:0,45,733	0/0:30,0:30:90.31:0,90,1462	0/0:11,0:11:33.08:0,33,510	0/0:35,0:35:99:0,105,1713	0/0:31,0:30:87.29:0,87,1396	0/0:8,0:8:24.08:0,24,391
chr10	43636420	.	G	GCCTTGGTTT	3070.47	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-6.005;DP=552;FS=45.141;HRun=0;HaplotypeScore=158.4399;InbreedingCoeff=0.9898;MQ=84.90;MQ0=0;MQRankSum=-5.195;QD=61.41;ReadPosRankSum=-4.877;VQSLOD=0.8598;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:84.29:0,84,2366	1/1:5,8:13:30.10:1263,30,0	0/0:24,0:24:27.98:0,28,828	0/0:19,0:19:27.09:0,27,721	0/0:21,0:21:54.19:0,54,1534	0/0:29,0:29:75.24:0,75,2091	0/0:12,0:12:24.08:0,24,651	1/1:18,6:27:42.12:1250,42,0	0/0:12,0:12:36.11:0,36,971	0/0:24,0:24:63.22:0,63,1752	0/0:18,0:18:42.14:0,42,1166	0/0:11,0:11:24.08:0,24,658	0/0:9,0:9:24.08:0,24,675	0/0:14,0:14:30.10:0,30,861	0/0:25,0:25:45.15:0,45,1227	0/0:35,0:35:60.15:0,60,1708	1/1:5,5:10:15.05:699,15,0	0/0:14,0:14:27.09:0,27,761	0/0:20,0:20:36.11:0,36,907	0/0:27,0:27:66.23:0,66,1853	0/0:24,0:24:45.15:0,45,1223	0/0:9,0:9:24.08:0,24,677	0/0:18,0:18:48.16:0,48,1377	0/0:17,0:17:36.12:0,36,1033	0/0:23,0:23:54.19:0,54,1520	0/0:24,0:24:66.21:0,66,1811	0/0:25,0:25:48.16:0,48,1373	0/0:16,0:16:36.12:0,36,1017
chr10	43636464	.	CTTTCT	C	3012.20	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=2.779;DP=389;FS=28.287;HRun=0;HaplotypeScore=84.0456;InbreedingCoeff=0.8940;MQ=76.00;MQ0=3;MQRankSum=-4.840;QD=18.59;ReadPosRankSum=1.965;VQSLOD=1.5369;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:45.07:0,45,806	0/0:9,0:9:23.56:0,24,353	0/0:27,0:20:31.80:0,32,415	0/0:30,0:18:32.57:0,33,542	0/0:19,0:19:48.15:0,48,809	0/0:15,0:15:36.12:0,36,828	0/0:4,0:4:6.02:0,6,115	0/0:26,0:25:43.15:0,43,738	0/0:7,0:7:12.04:0,12,256	1/1:5,10:14:33.07:558,33,0	1/1:9,1:10:21.02:321,21,0	0/0:12,0:12:27.09:0,27,629	0/0:8,0:8:18.01:0,18,265	0/0:10,0:10:18.01:0,18,340	1/1:19,0:19:9.03:118,9,0	1/1:25,0:25:12.04:157,12,0	0/0:6,0:6:9.03:0,9,141	1/1:3,2:5:6.02:104,6,0	1/1:11,5:16:15.01:185,15,0	1/1:6,10:16:12.01:178,12,0	1/1:5,2:7:3.01:38,3,0	0/0:7,0:7:9.03:0,9,179	0/0:13,0:13:30.09:0,30,608	0/0:12,0:12:21.53:0,22,398	1/1:6,5:11:24.08:409,24,0	1/1:6,13:19:36.10:598,36,0	1/1:9,3:12:27.05:423,27,0	1/1:6,1:7:9.02:140,9,0
chr10	43636473	.	CTTTTCTTTTTTTCTTTTTTTTT	C	1304.65	PASS	AB=1.000;AC=12;AF=0.214;AN=56;BaseQRankSum=1.435;DP=395;FS=6.854;HRun=0;HaplotypeScore=198.5929;InbreedingCoeff=0.1116;MQ=61.35;MQ0=12;MQRankSum=0.977;QD=9.45;ReadPosRankSum=0.865;VQSLOD=2.2026;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:21:60.07:0,60,2599	0/0:9,0:9:27.02:0,27,934	0/0:24,0:14:32.62:0,33,557	0/0:28,0:14:33.96:0,34,598	0/0:24,0:23:54.04:0,54,2356	0/0:15,0:15:42.11:0,42,2142	0/0:5,0:5:12.04:0,12,534	0/0:22,0:21:55.33:0,55,1868	0/0:9,0:9:24.08:0,24,881	0/1:14,0:12:19.35:19,0,277	0/1:15,0:14:40.78:41,0,518	0/0:15,0:15:39.12:0,39,2089	0/0:11,0:12:27.01:0,27,1237	0/0:12,0:12:33.08:0,33,1578	1/1:0,13:13:9.03:533,9,0	1/1:6,17:23:12.04:711,12,0	0/0:6,0:5:11.95:0,12,471	0/0:5,0:5:5.81:0,6,33	0/1:13,0:13:46.23:46,0,255	0/1:13,0:13:7.71:8,0,182	0/1:8,0:7:10.97:11,0,83	0/0:8,0:7:12.04:0,12,334	0/0:13,0:13:33:0,33,1233	0/0:14,0:14:29.98:0,30,1075	0/1:14,0:14:26.06:26,0,510	0/1:16,0:15:43.92:44,0,431	0/0:14,0:14:10.10:0,10,734	0/1:9,0:8:20.95:21,0,195
chr10	43636482	.	TTTTC	T	993.25	PASS	AB=0.966;AC=25;AF=0.446;AN=56;BaseQRankSum=5.869;DP=391;FS=52.174;HRun=0;HaplotypeScore=82.0541;InbreedingCoeff=0.5990;MQ=49.73;MQ0=26;MQRankSum=-5.904;QD=4.47;ReadPosRankSum=-1.591;VQSLOD=-0.3348;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:19:30.64:0,31,403	0/1:9,1:9:35.65:36,0,75	0/1:21,0:10:0.97:1,0,58	0/0:24,0:10:12.03:0,12,114	0/1:20,0:19:3.01:3,0,65	0/0:17,0:17:25.71:0,26,456	0/0:7,0:7:14.37:0,14,99	0/0:18,0:17:9.45:0,9,231	0/0:12,0:10:11.22:0,11,131	1/1:18,0:15:28.50:148,29,0	1/1:15,0:14:4.94:96,5,0	0/0:17,0:17:23.72:0,24,340	0/0:10,0:10:13.47:0,13,132	0/1:13,0:12:2.80:3,0,194	1/1:13,0:13:9.02:90,9,0	1/1:19,0:18:12.02:119,12,0	0/0:5,0:4:2.02:0,2,20	1/1:6,0:6:7.27:40,7,0	0/1:11,1:11:2.49:30,0,2	1/1:20,1:21:21.72:121,22,0	0/0:6,0:5:2.45:0,2,12	0/0:8,0:7:9.40:0,9,67	0/0:10,0:10:17.48:0,17,232	0/0:14,0:13:14.20:0,14,121	1/1:15,0:13:24.83:127,25,0	1/1:18,0:17:32.11:159,32,0	1/1:15,1:15:30.59:191,31,0	1/1:5,0:3:5.25:23,5,0
chr10	43647580	.	C	CTATG	1663.03	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-4.101;DP=710;FS=1.650;HRun=0;HaplotypeScore=115.7559;InbreedingCoeff=0.9048;MQ=78.91;MQ0=0;MQRankSum=-4.766;QD=61.59;ReadPosRankSum=-4.328;VQSLOD=4.3048;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,141,2586	0/0:13,0:13:30.10:0,30,560	0/0:15,0:15:37.46:0,37,621	0/0:18,0:18:40.93:0,41,693	0/0:26,0:26:75.25:0,75,1365	0/0:28,0:28:75.26:0,75,1389	0/0:27,0:27:78.26:0,78,1414	0/0:30,0:30:78.27:0,78,1453	0/0:20,0:20:54.19:0,54,1002	0/0:31,0:31:84.28:0,84,1530	0/0:17,0:17:42.12:0,42,751	0/0:32,0:32:87.30:0,87,1618	0/0:20,0:20:54.14:0,54,913	0/0:23,0:23:63.22:0,63,1175	0/0:23,0:23:57.20:0,57,1064	0/0:27,0:27:78.24:0,78,1384	0/0:22,0:22:63.20:0,63,1131	0/0:18,0:18:54.19:0,54,1007	1/1:8,19:27:74.95:1758,75,0	0/0:26,0:26:69.21:0,69,1211	0/0:42,0:42:99:0,114,2097	0/0:29,0:29:84.29:0,84,1538	0/0:27,0:27:69.24:0,69,1282	0/0:37,0:37:99:0,108,1998	0/0:28,0:28:69.21:0,69,1228	0/0:34,0:34:96.31:0,96,1734	0/0:16,0:16:45.13:0,45,778	0/0:3,0:3:6.02:0,6,112
chr10	43649186	.	G	GGTTTGAGGTGTTGGGGGATGTCTG	3323.19	PASS	AB=0.733;AC=29;AF=0.967;AN=30;BaseQRankSum=-1.940;DP=50;FS=2.762;HRun=0;HaplotypeScore=38.7287;InbreedingCoeff=-0.1749;MQ=142.80;MQ0=0;MQRankSum=-0.915;QD=79.12;ReadPosRankSum=0.110;VQSLOD=2.3970;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,0:1:3:25,3,0	1/1:2,0:2:6.02:165,6,0	1/1:1,0:4:12.04:690,12,0	0/1:7,1:11:36.53:1459,0,37	1/1:3,0:3:3.01:49,3,0	1/1:2,0:2:3.01:58,3,0	./.	./.	1/1:2,0:2:6.01:104,6,0	./.	1/1:4,0:4:9.03:209,9,0	./.	1/1:2,0:2:3.01:73,3,0	1/1:2,0:2:2.97:20,3,0	1/1:1,0:1:3.01:49,3,0	1/1:3,0:3:9.02:182,9,0	./.	./.	./.	1/1:3,0:3:6.02:140,6,0	1/1:1,0:1:3.01:43,3,0	1/1:1,0:1:3.01:59,3,0	./.	./.	./.	./.	./.	./.
chr10	43652170	.	CTTAA	C	1733.01	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.287;DP=448;FS=2.288;HRun=0;HaplotypeScore=75.0927;InbreedingCoeff=0.9558;MQ=57.47;MQ0=1;MQRankSum=-0.741;QD=42.27;ReadPosRankSum=1.896;VQSLOD=3.4806;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,141,3757	0/0:6,0:6:18.06:0,18,486	0/0:8,0:7:17.96:0,18,465	0/0:7,0:7:11.01:0,11,469	0/0:26,0:26:75.26:0,75,2024	0/0:14,0:14:36.12:0,36,983	0/0:17,0:17:48.13:0,48,1198	0/0:25,0:25:72.25:0,72,1845	0/0:17,0:17:45.15:0,45,1178	0/0:11,0:11:33.07:0,33,738	0/0:12,0:12:30.06:0,30,646	0/0:19,0:19:51.18:0,51,1369	0/0:15,0:15:36.12:0,36,941	0/0:19,0:19:48.16:0,48,1310	1/1:0,24:24:57.20:1105,57,0	1/1:1,16:17:39.13:750,39,0	0/0:30,0:30:81.28:0,81,2166	0/0:8,0:8:15.05:0,15,383	0/0:11,0:11:30.09:0,30,642	0/0:7,0:7:21.07:0,21,509	0/0:13,0:13:30.09:0,30,610	0/0:14,0:14:42.14:0,42,1118	0/0:17,0:17:48.16:0,48,1266	0/0:17,0:17:42.14:0,42,1122	0/0:15,0:15:35.25:0,35,881	0/0:14,0:14:35.67:0,36,943	0/0:9,0:9:21.07:0,21,519	0/0:6,0:6:18.06:0,18,490
chr10	43653052	.	TTTGGTC	T	1556.38	PASS	AB=0.990;AC=24;AF=0.429;AN=56;BaseQRankSum=4.457;DP=542;FS=82.008;HRun=0;HaplotypeScore=159.0042;InbreedingCoeff=-0.3178;MQ=48.34;MQ0=32;MQRankSum=-4.795;QD=4.85;ReadPosRankSum=4.501;VQSLOD=-0.5310;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:21,0:16:46.15:46,0,106	1/1:8,0:8:14.28:116,14,0	0/0:63,0:9:14.07:0,14,171	0/0:73,0:21:21.62:0,22,284	0/1:19,5:24:90.13:230,0,90	0/0:15,0:14:20.97:0,21,319	0/0:10,0:9:12.72:0,13,326	0/0:39,0:37:48.93:0,49,363	0/0:15,0:15:1.55:0,2,125	0/1:27,0:27:74.31:74,0,215	0/1:17,0:17:13.44:77,0,13	0/1:7,0:7:30.68:31,0,45	0/1:9,0:8:10.54:78,0,11	0/1:10,0:9:50.79:71,0,51	0/1:12,0:11:40.25:40,0,97	0/1:14,0:14:99:119,0,142	0/1:25,0:22:7.13:96,0,7	0/1:16,0:15:22:22,0,24	0/1:12,0:12:11.03:11,0,53	1/1:20,0:20:4.30:145,4,0	0/0:6,0:6:8.28:0,8,45	0/1:8,0:7:4.13:44,0,4	0/1:14,0:14:40.65:43,0,41	0/1:14,0:11:15.21:40,0,15	1/1:15,0:14:17.17:124,17,0	0/1:13,0:12:36.08:36,0,79	0/1:26,0:25:11.86:235,0,12	0/1:9,0:7:21.92:43,0,22
chr10	43653054	.	TGG	T	1270.34	PASS	AB=0.951;AC=47;AF=0.839;AN=56;BaseQRankSum=0.548;DP=514;FS=2.452;HRun=2;HaplotypeScore=133.5567;InbreedingCoeff=0.1932;MQ=50.78;MQ0=30;MQRankSum=-2.950;QD=3.33;ReadPosRankSum=3.944;VQSLOD=-0.3671;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:16,2:14:43.25:68,0,43	1/1:7,0:7:9.68:45,10,0	0/0:62,0:10:13.04:0,13,127	0/0:67,1:21:28.66:0,29,245	1/1:19,1:22:31.76:207,32,0	0/1:13,0:12:18.06:33,0,18	0/1:12,0:11:13.83:14,0,27	1/1:38,0:36:8.76:37,9,0	0/1:13,1:14:29.91:96,0,30	1/1:26,0:26:23.47:104,23,0	1/1:17,0:17:13.27:58,13,0	1/1:5,0:5:2.80:8,3,0	1/1:7,1:7:10.53:69,11,0	1/1:8,0:7:10.11:45,10,0	0/1:11,0:11:17.55:18,0,27	1/1:14,0:15:4.17:73,4,0	1/1:20,0:17:10.49:49,10,0	1/1:16,0:15:8.27:40,8,0	1/1:12,0:12:7.37:24,7,0	1/1:18,0:18:16.65:86,17,0	1/1:6,0:6:3.33:9,3,0	1/1:7,0:7:4.39:18,4,0	1/1:13,0:13:5.64:17,6,0	1/1:14,0:11:7.96:32,8,0	1/1:14,0:13:12.61:60,13,0	1/1:13,0:12:10.38:45,10,0	1/1:25,0:25:28:141,28,0	1/1:9,0:7:4.80:29,5,0
chr10	43653824	.	ATGTT	A	731.17	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.715;DP=629;FS=3.468;HRun=0;HaplotypeScore=99.3302;InbreedingCoeff=0.9964;MQ=74.36;MQ0=1;MQRankSum=-2.122;QD=36.56;ReadPosRankSum=2.829;VQSLOD=3.7860;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:34:99:0,105,2387	0/0:11,0:11:30.10:0,30,792	0/0:30,0:27:52.38:0,52,1394	0/0:17,0:14:27.03:0,27,532	0/0:26,0:26:75.26:0,75,1945	0/0:23,0:23:66.21:0,66,1639	0/0:25,0:25:72.23:0,72,1830	0/0:29,0:29:81.26:0,81,1956	1/1:0,20:20:45.15:826,45,0	0/0:24,0:24:72.25:0,72,1890	0/0:20,0:20:57.18:0,57,1413	0/0:18,0:18:54.19:0,54,1385	0/0:16,0:16:42.13:0,42,1035	0/0:20,0:20:57.20:0,57,1492	0/0:27,0:27:75.26:0,75,1954	0/0:21,0:21:60.19:0,60,1512	0/0:33,0:33:96.29:0,96,2386	0/0:17,0:17:48.16:0,48,1242	0/0:20,0:20:57.18:0,57,1385	0/0:24,0:24:69.24:0,69,1770	0/0:18,0:18:51.13:0,51,1276	0/0:13,0:13:24.08:0,24,633	0/0:21,0:21:57.09:0,57,1372	0/0:24,0:24:66.23:0,66,1719	0/0:23,0:23:69.22:0,69,1759	0/0:22,0:22:66.22:0,66,1679	0/0:29,0:29:72.23:0,72,1745	0/0:23,0:23:63.16:0,63,1485
chr10	43653908	.	T	TC	1114.73	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-5.392;DP=631;FS=1.544;HRun=2;HaplotypeScore=60.7944;InbreedingCoeff=0.9996;MQ=75.98;MQ0=0;MQRankSum=-2.324;QD=37.16;ReadPosRankSum=1.224;VQSLOD=4.2772;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,102,1236	0/0:18,0:18:51.16:0,51,631	0/0:18,0:18:54.16:0,54,653	0/0:24,0:25:66.11:0,66,761	1/1:1,29:30:84.28:1210,84,0	0/0:14,0:14:39.12:0,39,484	0/0:23,0:23:66.21:0,66,818	0/0:46,0:46:99:0,117,1441	0/0:15,0:15:39.12:0,39,483	0/0:19,0:19:57.17:0,57,694	0/0:13,0:13:33.10:0,33,409	0/0:21,0:21:60.18:0,60,730	0/0:18,0:18:54.17:0,54,666	0/0:23,0:23:69.22:0,69,855	0/0:31,0:31:93.28:0,93,1140	0/0:22,0:22:63.20:0,63,780	0/0:34,0:34:99:0,102,1250	0/0:17,0:17:51.16:0,51,631	0/0:19,0:19:57.18:0,57,706	0/0:23,0:23:60.19:0,60,744	0/0:25,0:25:72.23:0,72,892	0/0:20,0:20:54.17:0,54,669	0/0:24,0:24:69.19:0,69,830	0/0:24,0:24:69.22:0,69,855	0/0:15,0:15:45.13:0,45,546	0/0:17,0:17:51.16:0,51,632	0/0:19,0:19:57.18:0,57,705	0/0:22,0:22:66.21:0,66,816
chr10	43654038	.	A	ATTCTTTCTTTCTTTCTTTCTTTCT	9632.47	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=4.204;DP=662;FS=0.000;HRun=0;HaplotypeScore=353.7831;InbreedingCoeff=0.9866;MQ=73.68;MQ0=0;MQRankSum=-9.763;QD=66.89;ReadPosRankSum=-1.307;VQSLOD=3.0221;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:81.25:0,81,3849	0/0:13,0:13:27.06:0,27,1367	0/0:23,0:22:18.03:0,18,395	0/0:25,0:25:25.61:0,26,551	0/0:35,0:35:84.22:0,84,3809	0/0:25,0:25:48.15:0,48,2252	0/0:19,0:19:45.14:0,45,2148	0/0:39,0:39:62.53:0,63,1859	0/0:16,0:16:39.13:0,39,2304	0/0:18,0:18:36.11:0,36,1657	0/0:18,0:18:39.12:0,39,1891	1/1:20,0:20:35.62:1341,36,0	1/1:11,8:20:18.06:1466,18,0	1/1:17,12:28:21.07:1998,21,0	0/0:25,0:25:66.22:0,66,3465	0/0:21,0:21:57.18:0,57,2754	0/0:29,0:29:75.23:0,75,4279	0/0:20,0:20:38.30:0,38,1662	0/0:27,0:27:34.56:0,35,1729	0/0:22,0:22:54.14:0,54,2580	0/0:16,0:15:26.09:0,26,1506	1/1:12,9:20:12.04:1323,12,0	1/1:10,18:29:24.30:2094,24,0	1/1:13,8:23:18.06:1410,18,0	0/0:20,0:20:45.14:0,45,2127	0/0:28,0:28:60.16:0,60,2245	0/0:21,0:20:42.08:0,42,1517	0/0:18,0:18:33.11:0,33,1904
chr10	43654171	.	C	CT	2125.93	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-6.582;DP=648;FS=6.016;HRun=1;HaplotypeScore=61.6324;InbreedingCoeff=0.9356;MQ=83.53;MQ0=0;MQRankSum=-3.032;QD=36.03;ReadPosRankSum=3.105;VQSLOD=3.8529;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,117,1470	0/0:15,0:15:39.13:0,39,506	0/0:22,0:22:55.44:0,55,743	0/0:21,0:21:54.10:0,54,669	0/0:26,0:26:75.22:0,75,945	0/0:24,0:24:72.22:0,72,919	0/0:21,0:21:60.19:0,60,779	0/0:27,0:26:72.23:0,72,923	0/0:16,1:17:6.19:0,6,578	0/0:34,0:34:93.28:0,93,1170	0/0:18,0:18:54.18:0,54,700	0/0:23,0:23:63.20:0,63,817	0/0:17,0:17:48.16:0,48,621	0/0:22,0:21:57.19:0,57,739	1/1:0,26:26:66.22:989,66,0	1/1:1,32:33:84.28:1259,84,0	0/0:21,0:21:63.20:0,63,818	0/0:17,0:17:48.13:0,48,606	0/0:24,0:23:69.21:0,69,879	0/0:14,0:14:42.14:0,42,543	0/0:49,0:49:99:0,141,1814	0/0:23,0:23:66.20:0,66,842	0/0:23,0:23:69.22:0,69,896	0/0:28,0:28:81.26:0,81,1051	0/0:22,0:22:60.19:0,60,779	0/0:24,0:24:66.21:0,66,844	0/0:12,0:12:36.12:0,36,467	0/0:4,0:4:12.04:0,12,156
chr10	43654379	.	TCCTTTGTCTCTGCCA	T	6476.70	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=11.130;DP=721;FS=1.158;HRun=0;HaplotypeScore=291.5501;InbreedingCoeff=0.9997;MQ=79.98;MQ0=0;MQRankSum=-11.577;QD=96.67;ReadPosRankSum=3.589;VQSLOD=4.4737;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,132,8929	0/0:12,0:12:36.12:0,36,2567	0/0:27,0:27:75.25:0,75,3619	0/0:30,0:31:82.83:0,83,4411	0/0:26,0:26:69.23:0,69,4488	0/0:26,0:26:75.26:0,75,4870	0/0:21,0:21:63.22:0,63,4580	0/0:29,0:29:81.28:0,81,5083	0/0:20,0:20:60.21:0,60,4247	0/0:32,0:32:93.31:0,93,6202	0/0:18,0:18:54.19:0,54,3642	0/0:32,0:32:96.32:0,96,6296	0/0:18,0:18:51.17:0,51,3157	0/0:24,0:24:72.24:0,72,4829	1/1:4,32:36:78.27:3462,78,0	1/1:5,26:31:69.24:3014,69,0	0/0:24,0:24:72.25:0,72,5008	0/0:19,0:19:57.18:0,57,3656	0/0:34,0:34:96.30:0,96,5875	0/0:18,0:18:54.18:0,54,3481	0/0:29,0:29:81.28:0,81,5549	0/0:26,0:26:72.25:0,72,4994	0/0:21,0:21:57.05:0,57,3381	0/0:25,0:25:72.25:0,72,5013	0/0:25,0:25:72.25:0,72,5018	0/0:37,0:37:99:0,111,7785	0/0:25,0:25:75.26:0,75,5126	0/0:10,0:10:30.10:0,30,2062
chr10	43655633	.	A	AGG	2463.65	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-11.431;DP=701;FS=4.384;HRun=3;HaplotypeScore=81.5122;InbreedingCoeff=0.9989;MQ=91.38;MQ0=0;MQRankSum=-3.514;QD=42.48;ReadPosRankSum=1.939;VQSLOD=3.2733;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,120,1678	0/0:10,0:10:27.08:0,27,361	0/0:28,0:28:72.24:0,72,1001	0/0:28,0:28:75.22:0,75,1001	0/0:18,0:18:45.15:0,45,630	0/0:31,0:31:93.27:0,93,1278	0/0:25,0:25:75.25:0,75,1049	0/0:34,0:34:99:0,99,1359	0/0:18,0:18:51.17:0,51,712	0/0:29,0:29:84.27:0,84,1162	0/0:23,0:23:57.18:0,57,779	0/0:27,0:27:81.26:0,81,1116	0/0:36,0:36:99:0,108,1474	0/0:23,0:23:66.22:0,66,923	1/1:1,33:34:87.30:1595,87,0	1/1:2,22:24:54.19:990,54,0	0/0:27,0:27:75.25:0,75,1049	0/0:24,0:24:69.20:0,69,943	0/0:28,0:28:75.13:0,75,1050	0/0:10,0:10:27.08:0,27,361	0/0:33,0:33:96.32:0,96,1339	0/0:22,0:22:66.19:0,66,879	0/0:19,0:19:54.17:0,54,739	0/0:28,0:28:78.23:0,78,1066	0/0:17,0:17:48.15:0,48,654	0/0:21,0:21:60.18:0,60,821	0/0:28,0:28:81.27:0,81,1130	0/0:13,0:13:39.13:0,39,546
chr10	43658945	.	G	GAACCAAAAAAAA	7249.07	PASS	AB=0.990;AC=42;AF=0.750;AN=56;BaseQRankSum=-4.183;DP=324;FS=12.108;HRun=0;HaplotypeScore=161.1379;InbreedingCoeff=-0.0674;MQ=38.22;MQ0=1;MQRankSum=-1.566;QD=22.72;ReadPosRankSum=-4.936;VQSLOD=1.6386;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:19:29.39:306,29,0	1/1:4,0:3:8.99:210,9,0	0/0:4,0:2:5.88:0,6,45	0/0:0,0:1:2.37:0,2,8	0/1:18,0:17:3.60:115,0,4	0/1:13,0:12:10.83:182,0,11	1/1:10,0:12:18.93:305,19,0	1/1:12,0:11:30.01:678,30,0	0/1:18,0:17:37.39:135,0,37	0/1:10,0:10:17.31:275,0,17	1/1:21,0:19:21.38:388,21,0	1/1:6,0:5:8.52:183,9,0	1/1:6,0:3:6.02:149,6,0	1/1:5,0:4:8.97:174,9,0	1/1:8,0:7:18.02:450,18,0	1/1:9,0:6:14.20:178,14,0	1/1:2,2:8:9.03:230,9,0	0/1:8,0:7:45.55:57,0,46	1/1:22,0:20:20.26:626,20,0	0/1:26,0:25:14.97:376,0,15	1/1:3,0:3:4.78:98,5,0	1/1:17,0:14:30.10:958,30,0	1/1:11,0:9:26.90:521,27,0	1/1:5,0:5:12.49:206,12,0	0/1:11,0:11:53.93:58,0,54	0/1:16,0:15:53.73:177,0,54	0/1:14,0:13:90.39:135,0,90	0/1:11,0:9:20.45:81,0,20
chr10	43659390	.	G	GTCTCTC	5653.44	PASS	AB=0.844;AC=36;AF=0.667;AN=54;BaseQRankSum=3.822;DP=714;FS=3.217;HRun=0;HaplotypeScore=172.0355;InbreedingCoeff=0.5418;MQ=58.95;MQ0=13;MQRankSum=-4.957;QD=11.02;ReadPosRankSum=-2.793;VQSLOD=3.8840;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:12.35:0,12,1081	1/1:7,5:12:6.02:88,6,0	0/1:47,0:24:0:0,0,0	./.	1/1:23,1:26:5.11:148,5,0	0/0:24,0:24:30.09:0,30,533	0/0:22,0:22:48.15:0,48,878	1/1:27,0:27:28.24:451,28,0	0/0:17,0:17:26.78:0,27,519	1/1:19,0:32:55.25:1152,55,0	0/1:17,0:24:0:0,0,0	1/1:25,0:25:9.03:211,9,0	1/1:22,0:20:15.03:303,15,0	1/1:15,0:22:3.01:78,3,0	1/1:28,0:28:23.98:593,24,0	1/1:26,0:28:24.07:400,24,0	1/1:23,0:22:26.92:425,27,0	1/1:22,1:23:30.08:550,30,0	0/1:17,4:20:37.84:215,0,38	1/1:25,0:25:14.76:189,15,0	0/1:6,8:14:0:0,0,0	1/1:33,0:33:2.75:23,3,0	0/1:17,0:17:0:0,0,0	0/0:30,0:30:0.49:0,0,1	0/0:17,0:26:0:0,0,0	1/1:9,7:16:27.03:536,27,0	1/1:16,14:32:8.25:137,8,0	0/1:10,3:13:8.26:154,0,8
chr10	43659391	.	T	TCTCTCTCTCTCTCTCA	3637.05	PASS	AB=0.970;AC=21;AF=0.375;AN=56;BaseQRankSum=6.902;DP=729;FS=0.512;HRun=0;HaplotypeScore=272.7211;InbreedingCoeff=-0.0155;MQ=58.29;MQ0=13;MQRankSum=-5.732;QD=8.94;ReadPosRankSum=-1.397;VQSLOD=2.1726;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:43.27:0,43,2524	0/1:12,0:12:63.08:69,0,63	0/0:47,0:24:25.58:0,26,291	0/0:51,0:19:18.05:0,18,216	0/1:26,0:26:23.92:24,0,141	0/0:25,0:25:51.06:0,51,1315	0/0:22,0:22:54.16:0,54,1937	0/1:27,0:27:99:297,0,125	0/0:18,0:18:41.54:0,42,1257	0/1:33,0:32:99:749,0,107	0/0:24,0:24:20.94:0,21,174	1/1:15,11:27:9.32:348,9,0	1/1:27,0:25:24.55:1104,25,0	1/1:26,0:24:21.38:272,21,0	0/1:28,0:28:92.72:301,0,93	0/1:28,0:28:71.40:71,0,137	0/1:22,0:21:11.36:11,0,262	0/1:22,0:22:99:197,0,245	0/1:22,0:21:13.41:13,0,274	0/1:24,0:24:40.50:40,0,238	0/0:14,0:14:5.57:0,6,50	1/1:35,0:35:3.01:48,3,0	0/1:7,11:20:0:0,0,0	0/0:13,17:33:2.69:0,3,12	0/0:27,0:26:21:0,21,182	0/1:15,0:15:81:81,0,91	0/0:32,0:32:5.02:0,5,126	0/1:12,0:12:9.14:9,0,139
chr10	43659393	.	T	TCTCTCTCTCTCTCA	3733.72	PASS	AB=1.000;AC=20;AF=0.370;AN=54;BaseQRankSum=8.105;DP=738;FS=2.305;HRun=0;HaplotypeScore=257.8411;InbreedingCoeff=-0.0562;MQ=57.73;MQ0=13;MQRankSum=-6.147;QD=9.65;ReadPosRankSum=-0.604;VQSLOD=2.2457;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:49.71:0,50,2336	0/1:12,0:12:64.40:67,0,64	0/0:46,0:23:28.55:0,29,310	0/0:51,0:19:18.05:0,18,216	0/1:26,0:25:26.57:27,0,131	0/0:29,0:29:51.07:0,51,1230	0/0:24,0:24:54.41:0,54,1784	0/1:27,0:27:99:292,0,147	0/0:20,0:20:40.79:0,41,1149	0/1:33,0:32:99:853,0,114	0/0:24,0:24:20.76:0,21,174	1/1:27,0:26:9.72:379,10,0	1/1:15,10:25:22.57:924,23,0	1/1:26,0:24:21.25:285,21,0	0/1:27,0:27:74.52:383,0,75	0/1:28,0:28:99:121,0,111	0/1:21,0:20:21.58:22,0,214	0/1:21,0:21:99:196,0,190	0/1:22,0:21:16.96:17,0,300	0/1:24,0:24:40.55:41,0,213	0/0:14,0:14:8.52:0,9,68	1/1:13,22:37:1.25:3,1,0	./.	0/0:33,0:33:2.21:0,2,12	0/0:26,0:25:21:0,21,182	0/1:16,0:16:86.20:104,0,86	0/0:34,0:34:1.83:0,2,158	0/1:13,0:13:20.47:20,0,125
chr10	43659423	.	T	TCACACACA	1287.73	PASS	AB=0.981;AC=23;AF=0.411;AN=56;BaseQRankSum=3.249;DP=604;FS=23.899;HRun=0;HaplotypeScore=181.1832;InbreedingCoeff=0.0988;MQ=46.15;MQ0=12;MQRankSum=-0.620;QD=3.95;ReadPosRankSum=-1.178;VQSLOD=0.9456;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:15:0,15,685	1/1:9,0:10:6.02:124,6,0	0/0:18,0:3:2.94:0,3,18	0/0:33,0:12:9.01:0,9,131	0/1:19,0:25:0:0,0,0	0/0:30,0:29:24.51:0,25,433	0/0:26,0:26:26.59:0,27,510	1/1:14,0:12:6.02:165,6,0	0/0:24,0:24:23.67:0,24,554	1/1:29,0:28:17.38:141,17,0	1/1:18,0:18:3.63:9,4,0	0/1:18,0:17:19.75:20,0,339	0/1:19,0:17:28.08:28,0,333	0/1:20,0:18:20.11:20,0,207	0/0:30,0:33:29.25:0,29,473	0/0:23,0:26:23.66:0,24,366	1/1:16,8:26:8.70:256,9,0	0/1:15,0:14:67.88:76,0,68	0/1:21,0:21:24.64:65,0,25	0/1:15,0:14:27.03:65,0,27	0/1:19,0:19:21.42:75,0,21	0/0:19,0:19:14.87:0,15,338	0/0:11,0:11:6.02:0,6,141	0/0:25,0:25:3.11:0,3,65	0/1:22,0:21:24.15:54,0,24	0/1:17,0:17:7.33:228,0,7	0/1:27,0:27:50.89:54,0,51	1/1:10,0:10:5.68:78,6,0
chr10	43660045	.	G	GT	11310.43	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-5.104;DP=831;FS=5.369;HRun=3;HaplotypeScore=84.1364;InbreedingCoeff=1.0000;MQ=91.26;MQ0=0;MQRankSum=-2.943;QD=38.87;ReadPosRankSum=1.630;VQSLOD=4.8368;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:54.11:0,54,611	0/0:12,0:12:36.11:0,36,432	0/0:32,0:32:87.21:0,87,1014	0/0:35,0:35:90.16:0,90,1028	0/0:37,0:37:99:0,108,1294	0/0:30,0:30:90.26:0,90,1067	0/0:20,0:20:54.08:0,54,629	0/0:35,0:35:93.28:0,93,1116	0/0:38,0:38:99:0,111,1317	1/1:1,35:37:99:1486,108,0	1/1:1,26:27:72.24:1008,72,0	0/0:34,0:34:99:0,99,1188	0/0:26,0:26:75.23:0,75,900	0/0:47,0:47:99:0,141,1680	0/0:41,0:41:99:0,105,1260	0/0:27,0:27:75.23:0,75,900	0/0:37,0:37:99:0,102,1222	1/1:0,18:18:54.18:756,54,0	1/1:1,39:40:99:1605,117,0	1/1:3,31:34:90.21:1216,90,0	1/1:0,28:28:81.27:1134,81,0	0/0:20,0:20:54.17:0,54,648	0/0:26,0:26:72.20:0,72,851	0/0:22,0:22:66.17:0,66,767	1/1:3,17:20:57.19:788,57,0	1/1:1,32:33:90.30:1260,90,0	1/1:2,29:31:78.26:1092,78,0	1/1:0,23:23:69.23:966,69,0
chr10	43660262	.	GTTAA	G	25500.91	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=12.663;DP=744;FS=0.331;HRun=0;HaplotypeScore=141.5020;InbreedingCoeff=0.9992;MQ=83.60;MQ0=0;MQRankSum=-6.152;QD=44.82;ReadPosRankSum=3.323;VQSLOD=5.4248;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:93.32:0,93,2425	1/1:1,8:9:21.07:386,21,0	0/0:25,0:25:66:0,66,1463	0/0:24,0:24:60.21:0,60,1490	0/0:25,0:24:72.25:0,72,1877	0/0:27,0:27:72.25:0,72,1900	0/0:22,0:22:60.21:0,60,1550	1/1:6,37:43:99:1899,108,0	0/0:19,0:19:51.16:0,51,1222	1/1:4,28:32:84.29:1537,84,0	1/1:0,16:16:42.14:767,42,0	1/1:0,28:28:72.25:1321,72,0	1/1:4,21:25:57.20:1049,57,0	1/1:1,26:27:75.26:1376,75,0	1/1:0,36:36:81.28:1490,81,0	1/1:3,36:39:93.32:1708,93,0	1/1:1,24:25:60.20:1085,60,0	1/1:0,16:16:39.13:715,39,0	1/1:5,31:36:93.30:1655,93,0	1/1:4,25:29:69.19:1211,69,0	1/1:1,31:32:72.25:1325,72,0	1/1:3,20:23:54.19:989,54,0	1/1:4,24:28:69.24:1269,69,0	1/1:2,31:33:78.06:1416,78,0	1/1:2,19:21:42.14:765,42,0	1/1:2,27:29:81.28:1475,81,0	1/1:2,27:29:78.27:1400,78,0	1/1:1,12:13:36.12:662,36,0
chr10	43661416	.	T	TA	1275.55	PASS	AC=22;AF=0.407;AN=54;BaseQRankSum=-1.733;DP=393;FS=1.126;HRun=7;HaplotypeScore=64.7438;InbreedingCoeff=0.8601;MQ=56.68;MQ0=14;MQRankSum=4.056;QD=11.39;ReadPosRankSum=1.874;VQSLOD=1.9715;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:74.27:0,74,684	1/1:3,0:3:2.92:17,3,0	0/0:40,0:12:7.02:0,7,54	0/0:30,0:3:0.14:0,0,1	1/1:10,0:10:18.92:95,19,0	0/0:17,0:16:33.89:0,34,302	0/0:10,0:10:20.92:0,21,176	1/1:12,16:25:53.39:526,53,0	0/0:3,0:3:9.01:0,9,83	0/0:16,0:16:41.80:0,42,328	0/0:21,0:21:32.63:0,33,233	1/1:8,0:8:19.90:123,20,0	1/1:9,0:9:22.26:131,22,0	1/1:7,0:7:12.85:59,13,0	1/1:9,1:9:13.52:108,14,0	1/1:2,6:8:9.03:108,9,0	1/1:6,17:20:21.06:253,21,0	0/0:11,0:10:17.95:0,18,144	0/0:20,0:18:50.82:0,51,404	0/0:10,0:10:23.93:0,24,191	0/0:8,0:8:11.85:0,12,82	1/1:1,0:1:1.55:4,2,0	./.	1/1:5,0:4:7.54:51,8,0	0/0:18,0:18:32.16:0,32,231	0/0:16,0:16:29.81:0,30,232	0/0:22,0:22:47.71:0,48,362	0/0:6,0:5:11.95:0,12,92
chr10	43661423	.	A	AAT	769.04	PASS	AB=1.000;AC=19;AF=0.352;AN=54;BaseQRankSum=-1.432;DP=381;FS=1.284;HRun=0;HaplotypeScore=71.5369;InbreedingCoeff=0.7132;MQ=55.05;MQ0=28;MQRankSum=2.959;QD=6.87;ReadPosRankSum=1.127;VQSLOD=3.0731;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:84.31:0,84,984	1/1:0,3:3:5.90:38,6,0	0/0:38,0:8:12.73:0,13,78	0/0:28,0:2:1.77:0,2,6	1/1:8,0:9:8.16:60,8,0	0/0:15,0:17:43.37:0,43,463	0/0:10,0:10:20.91:0,21,225	1/1:26,1:23:24.90:337,25,0	0/0:6,0:5:11.39:0,11,117	0/0:15,0:14:41.84:0,42,344	0/0:14,0:15:36.21:0,36,264	1/1:10,0:9:9.99:97,10,0	1/1:11,0:11:5.19:93,5,0	1/1:5,0:5:7.62:35,8,0	1/1:6,1:7:10.56:103,11,0	0/1:9,0:8:17.68:40,0,18	1/1:22,1:20:0.40:101,0,0	0/0:10,0:8:20.02:0,20,161	0/0:20,0:17:50.91:0,51,440	0/0:10,0:10:24.02:0,24,223	0/0:5,0:5:11.82:0,12,82	0/0:2,0:1:0.89:0,1,2	./.	1/1:6,0:4:4.75:45,5,0	0/0:16,0:16:34.29:0,34,269	0/0:14,0:13:34:0,34,273	0/0:21,0:20:47.83:0,48,400	0/0:5,0:4:12.02:0,12,114
chr10	43661428	.	TTTTTTTTTTTGGTTC	T	4290.06	PASS	AB=0.947;AC=14;AF=0.259;AN=54;BaseQRankSum=9.808;DP=380;FS=6.839;HRun=0;HaplotypeScore=126.7237;InbreedingCoeff=0.4060;MQ=53.81;MQ0=34;MQRankSum=-7.582;QD=32.26;ReadPosRankSum=0.742;VQSLOD=3.4635;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:30:81.28:0,81,5053	0/0:2,0:2:3.01:0,3,103	0/0:38,0:8:15.03:0,15,279	0/0:29,0:2:3.85:0,4,22	0/0:10,0:9:21.07:0,21,1106	0/0:17,0:16:39.13:0,39,2498	0/0:8,0:8:18.06:0,18,1070	0/0:27,0:23:47.83:0,48,2264	0/0:6,0:5:9.03:0,9,580	0/1:14,1:14:38.79:279,0,39	1/1:12,0:12:4.42:543,4,0	0/0:10,0:9:21.07:0,21,1067	0/0:9,0:9:18.06:0,18,1034	0/0:5,0:5:15.05:0,15,836	0/0:8,0:7:12.04:0,12,741	0/0:10,0:9:15.05:0,15,993	0/0:24,0:21:30.10:0,30,1983	1/1:13,0:8:8.92:260,9,0	0/1:22,0:19:25.41:528,0,25	1/1:10,0:10:21:518,21,0	0/0:4,0:4:5.84:0,6,35	0/0:2,0:1:3.01:0,3,208	./.	0/0:5,0:2:3.01:0,3,107	1/1:17,1:18:4.37:609,4,0	0/1:14,1:14:23.80:558,0,24	0/1:19,2:20:13.91:626,0,14	1/1:6,1:5:12.04:368,12,0
chr10	43661429	.	TTTTTTTTTTGGTTC	T	5541.13	PASS	AC=18;AF=0.333;AN=54;BaseQRankSum=8.088;DP=377;FS=6.992;HRun=0;HaplotypeScore=114.7944;InbreedingCoeff=0.8228;MQ=52.12;MQ0=34;MQRankSum=-8.569;QD=41.98;ReadPosRankSum=0.220;VQSLOD=3.8634;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:30:81.22:0,81,4667	0/0:2,0:2:3.01:0,3,88	0/0:37,0:7:12.03:0,12,207	0/0:29,0:2:3.11:0,3,10	0/0:10,0:9:21.07:0,21,1004	0/0:16,0:15:39.13:0,39,2311	0/0:7,0:7:18.04:0,18,982	0/0:27,0:23:44.89:0,45,2034	0/0:6,0:5:9.03:0,9,538	1/1:9,4:12:11.62:335,12,0	1/1:5,7:12:20.94:719,21,0	0/0:10,0:9:20.90:0,21,966	0/0:9,0:9:18.06:0,18,941	0/0:5,0:5:15.05:0,15,765	0/0:8,0:7:12.04:0,12,689	0/0:10,0:9:15.05:0,15,925	0/0:25,0:22:30.10:0,30,1845	1/1:9,5:8:8.97:336,9,0	1/1:11,11:19:29.72:767,30,0	1/1:1,9:10:21.01:692,21,0	0/0:4,0:4:0:0,0,0	0/0:2,0:1:3.01:0,3,194	./.	0/0:5,0:2:3.01:0,3,87	1/1:6,12:18:20.92:769,21,0	1/1:6,9:14:26.85:735,27,0	1/1:11,10:20:20.85:754,21,0	1/1:3,4:5:12.04:433,12,0
chr10	43661716	.	TAC	T	1749.42	PASS	AB=0.760;AC=24;AF=0.462;AN=52;BaseQRankSum=-0.036;DP=466;FS=7.935;HRun=0;HaplotypeScore=84.9226;InbreedingCoeff=0.5967;MQ=60.84;MQ0=15;MQRankSum=1.750;QD=7.48;ReadPosRankSum=2.059;VQSLOD=2.6641;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:18:14.83:0,15,141	0/0:3,0:3:2.99:0,3,24	./.	./.	0/0:7,0:18:16.41:0,16,168	0/0:13,0:13:18.05:0,18,249	0/0:16,0:16:25.01:0,25,493	1/1:18,0:18:5.92:41,6,0	0/1:17,4:21:39.02:39,0,288	1/1:10,10:20:30.99:308,31,0	0/1:9,8:17:25.72:127,0,26	0/0:13,0:13:3.88:0,4,27	0/0:9,0:16:3:0,3,26	0/0:10,0:13:2.96:0,3,26	1/1:7,13:21:32.92:345,33,0	1/1:6,7:13:6.02:66,6,0	0/0:17,0:16:6.49:0,6,78	0/0:10,0:16:20.98:0,21,199	1/1:12,3:14:5.99:57,6,0	1/1:8,5:13:9.02:99,9,0	1/1:18,1:20:26.50:204,27,0	0/0:7,0:9:3:0,3,26	0/0:16,0:18:8.97:0,9,71	0/0:14,0:19:9:0,9,94	1/1:11,7:18:12.03:131,12,0	1/1:13,8:21:24.05:254,24,0	1/1:12,11:24:20.89:231,21,0	1/1:10,2:12:3.01:33,3,0
chr10	43661753	.	ACACT	A	644.22	PASS	AB=1.000;AC=4;AF=0.071;AN=56;BaseQRankSum=2.680;DP=569;FS=2.010;HRun=0;HaplotypeScore=113.5618;InbreedingCoeff=0.3645;MQ=60.31;MQ0=31;MQRankSum=3.463;QD=9.07;ReadPosRankSum=-3.629;VQSLOD=2.1047;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:20:39.02:0,39,522	0/0:2,0:2:2.99:0,3,23	0/0:58,0:19:33.31:0,33,427	0/0:66,0:23:36.29:0,36,412	0/0:25,0:25:38.94:0,39,554	0/0:17,0:17:48.03:0,48,723	0/0:20,0:20:37.87:0,38,1039	1/1:0,21:21:62.93:560,63,0	0/0:23,0:23:60.01:0,60,900	0/0:19,0:19:23.89:0,24,323	0/0:14,0:14:26.93:0,27,281	0/0:16,0:16:24.41:0,24,198	0/0:12,0:12:11.99:0,12,136	0/0:11,0:11:6.48:0,6,90	0/0:21,0:21:31.28:0,31,399	0/0:16,0:16:26.95:0,27,221	0/1:21,0:20:69.74:122,0,70	0/0:20,0:20:33.38:0,33,667	0/0:17,0:17:24.21:0,24,345	0/0:9,0:9:11.95:0,12,91	0/1:29,0:28:77.05:77,0,365	0/0:5,0:5:9.01:0,9,114	0/0:17,0:17:29.96:0,30,283	0/0:26,0:26:41.83:0,42,425	0/0:15,0:15:20.93:0,21,165	0/0:19,0:19:34.32:0,34,433	0/0:21,0:20:42.13:0,42,319	0/0:8,0:8:20.51:0,21,148
chr10	43664047	.	AGAG	A	1472.75	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.590;DP=642;FS=0.656;HRun=0;HaplotypeScore=90.5750;InbreedingCoeff=0.9990;MQ=63.54;MQ0=1;MQRankSum=0.611;QD=30.68;ReadPosRankSum=6.053;VQSLOD=3.4328;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:96.27:0,96,1872	0/0:11,0:11:33.10:0,33,642	0/0:23,0:18:45.08:0,45,747	0/0:23,0:14:27.06:0,27,433	0/0:32,0:32:90.23:0,90,1763	0/0:16,0:16:42.14:0,42,882	0/0:24,0:24:57.18:0,57,1164	0/0:28,0:28:75.21:0,75,1367	0/0:30,0:30:84.22:0,84,1635	0/0:21,0:21:63.20:0,63,1197	0/0:25,0:25:69.22:0,69,1353	0/0:19,0:19:57.20:0,57,1218	0/0:15,0:15:39.08:0,39,683	0/0:22,0:22:54.17:0,54,1096	1/1:2,29:31:66.22:1032,66,0	1/1:1,16:17:36.12:563,36,0	0/0:41,0:41:99:0,120,2514	0/0:20,0:20:51.17:0,51,1012	0/0:24,0:24:57.13:0,57,1050	0/0:17,0:17:51.18:0,51,1088	0/0:21,0:21:57.18:0,57,1138	0/0:17,0:17:45.14:0,45,871	0/0:17,0:17:48.14:0,48,952	0/0:22,0:22:63.20:0,63,1249	0/0:13,0:13:33.11:0,33,713	0/0:33,0:33:87.29:0,87,1812	0/0:27,0:27:78.25:0,78,1645	0/0:16,0:16:39.12:0,39,698
chr10	43666151	.	T	TA	1094.24	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-4.429;DP=708;FS=0.000;HRun=7;HaplotypeScore=74.9142;InbreedingCoeff=0.9996;MQ=80.37;MQ0=0;MQRankSum=-1.818;QD=30.40;ReadPosRankSum=0.663;VQSLOD=3.8988;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,114,1083	1/1:0,11:11:33.10:399,33,0	0/0:24,0:24:52.87:0,53,491	0/0:15,0:15:36.96:0,37,344	0/0:40,0:40:99:0,108,1016	0/0:37,0:37:99:0,99,949	0/0:25,0:25:57.08:0,57,550	0/0:28,0:29:77.14:0,77,726	0/0:21,0:21:54.08:0,54,521	0/0:39,0:39:99:0,108,1030	0/0:17,0:17:48.07:0,48,463	0/0:36,0:36:99:0,99,950	0/0:19,0:19:54.09:0,54,521	0/0:27,0:27:75.11:0,75,724	0/0:30,0:30:69.09:0,69,660	0/0:25,0:24:66.10:0,66,637	1/1:2,23:25:69.17:817,69,0	0/0:31,0:31:81.09:0,81,770	0/0:21,0:21:60.09:0,60,579	0/0:31,0:31:81.12:0,81,782	0/0:12,0:12:36.06:0,36,348	0/0:23,0:23:60.09:0,60,579	0/0:22,0:22:63.08:0,63,602	0/0:11,0:10:33.04:0,33,313	0/0:28,0:28:66.09:0,66,637	0/0:22,0:22:62.84:0,63,591	0/0:28,0:27:75.04:0,75,703	0/0:15,0:15:42.07:0,42,406
chr10	43667818	.	ACCCC	A	5373.40	PASS	AB=0.667;AC=21;AF=0.375;AN=56;BaseQRankSum=5.893;DP=470;FS=17.119;HRun=13;HaplotypeScore=104.1513;InbreedingCoeff=0.8609;MQ=67.54;MQ0=2;MQRankSum=-5.739;QD=28.43;ReadPosRankSum=6.411;VQSLOD=1.8424;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:29:26.96:0,27,307	0/0:0,0:4:3.01:0,3,54	0/0:15,0:10:20.63:0,21,361	0/0:13,0:13:20.68:0,21,258	0/1:3,0:6:0.64:1,0,12	0/0:16,0:20:20.86:0,21,207	0/0:15,0:23:29.88:0,30,321	0/0:20,0:20:29.96:0,30,434	0/0:12,0:16:20.95:0,21,204	1/1:6,17:23:44.79:658,45,0	1/1:3,6:9:24.05:312,24,0	0/0:14,0:18:28.54:0,29,352	0/0:8,0:10:8.99:0,9,84	0/0:9,0:13:12.01:0,12,126	0/0:13,0:18:38.46:0,38,292	0/0:4,0:15:24.20:0,24,166	0/0:21,0:25:59.77:0,60,1017	1/1:3,7:10:17.96:263,18,0	1/1:3,16:19:47.75:667,48,0	1/1:1,17:18:41.97:613,42,0	1/1:9,25:34:41.94:614,42,0	0/0:6,0:6:5.77:0,6,37	0/0:4,0:4:5.89:0,6,67	0/0:21,0:30:52.74:0,53,586	1/1:3,14:17:42.09:595,42,0	1/1:6,19:25:57.10:795,57,0	1/1:6,21:27:56.82:833,57,0	1/1:1,0:1:2.99:24,3,0
chr10	43668052	.	C	CT	108.90	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-1.429;DP=401;FS=0.000;HRun=9;HaplotypeScore=56.0950;InbreedingCoeff=0.6128;MQ=69.05;MQ0=1;MQRankSum=1.763;QD=15.56;ReadPosRankSum=0.145;VQSLOD=3.4900;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:30:62.97:0,63,547	0/0:7,0:7:15:0,15,130	0/0:6,0:4:5.21:0,5,33	0/0:16,0:15:4.99:0,5,93	1/1:1,6:7:18.05:199,18,0	0/0:14,0:14:32.88:0,33,277	0/0:21,0:21:53.98:0,54,469	0/0:31,1:32:44.75:0,45,609	0/0:18,0:18:38.98:0,39,337	0/0:9,0:9:23.60:0,24,208	0/0:13,0:13:26.98:0,27,234	0/0:11,0:11:32.99:0,33,286	0/0:6,0:6:14.98:0,15,126	0/0:10,0:10:20.97:0,21,182	0/0:18,0:19:56.02:0,56,471	0/0:4,0:4:9:0,9,78	0/0:23,0:23:47.98:0,48,417	0/0:22,0:22:50.98:0,51,443	0/0:14,1:15:5.85:0,6,279	0/0:7,0:7:14.98:0,15,130	0/0:24,0:24:65.94:0,66,563	0/0:9,0:9:20.99:0,21,182	0/0:8,0:8:17.98:0,18,154	0/0:19,1:20:6.74:0,7,275	0/0:10,0:10:20.98:0,21,182	0/0:13,0:13:32.99:0,33,286	0/0:18,0:18:47.99:0,48,417	0/0:9,0:9:17.98:0,18,155
chr10	43668126	.	C	CA	374.99	PASS	AB=0.500;AC=37;AF=0.881;AN=42;BaseQRankSum=-0.739;DP=55;FS=0.000;HRun=0;HaplotypeScore=66.2879;InbreedingCoeff=0.2132;MQ=36.37;MQ0=0;MQRankSum=0.246;QD=7.08;ReadPosRankSum=-2.103;VQSLOD=2.4879;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,6:7:4.03:17,4,0	./.	./.	./.	0/1:0,1:1:0:0,0,0	1/1:2,0:2:2.99:24,3,0	0/0:0,1:1:0:0,0,0	./.	1/1:1,3:4:7.98:60,8,0	1/1:0,1:1:1.82:5,2,0	./.	1/1:1,2:3:3.91:27,4,0	1/1:1,0:1:2.99:24,3,0	1/1:0,4:4:10.86:48,11,0	1/1:0,3:3:4.85:36,5,0	1/1:0,2:2:1.55:4,2,0	1/1:0,4:4:5.46:20,5,0	1/1:0,1:1:1.82:5,2,0	1/1:0,2:2:2.50:9,2,0	./.	1/1:1,1:2:5.98:48,6,0	1/1:0,2:2:5.59:26,6,0	1/1:0,1:1:2.50:9,2,0	1/1:1,1:2:2.99:23,3,0	0/0:0,1:1:0.89:0,1,2	1/1:0,8:8:15.43:49,15,0	1/1:0,3:3:4.34:18,4,0	./.
chr10	43669363	.	GC	G	2127.11	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.880;DP=689;FS=3.749;HRun=3;HaplotypeScore=63.9564;InbreedingCoeff=0.9970;MQ=88.49;MQ0=0;MQRankSum=-0.060;QD=31.75;ReadPosRankSum=0.512;VQSLOD=3.8494;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:57:99:0,169,2396	1/1:0,6:6:18.06:223,18,0	0/0:29,0:29:81.26:0,81,1129	0/0:22,0:21:57.14:0,57,757	0/0:23,0:23:69.17:0,69,936	0/0:16,0:16:42.13:0,42,587	0/0:21,0:21:63.20:0,63,889	1/1:5,22:27:66.21:818,66,0	0/0:31,0:31:90.30:0,90,1295	0/0:30,0:30:90.30:0,90,1281	0/0:18,0:18:54.18:0,54,776	0/0:27,0:27:81.27:0,81,1166	0/0:31,0:31:93.26:0,93,1298	0/0:15,0:15:45.15:0,45,647	0/0:31,0:31:90.25:0,90,1256	0/0:23,0:23:69.23:0,69,993	1/1:0,34:34:99:1227,99,0	0/0:15,0:15:45.11:0,45,623	0/0:23,0:23:69.23:0,69,991	0/0:19,0:19:54.18:0,54,777	0/0:33,0:33:96.27:0,96,1311	0/0:23,0:23:66.22:0,66,942	0/0:18,0:18:51.17:0,51,734	0/0:24,0:24:72.24:0,72,1037	0/0:28,0:28:84.28:0,84,1209	0/0:23,0:23:66.22:0,66,951	0/0:31,0:31:93.31:0,93,1339	0/0:11,0:11:33.11:0,33,475
chr10	43669822	.	AGAG	A	1477.55	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.646;DP=698;FS=8.340;HRun=0;HaplotypeScore=101.7986;InbreedingCoeff=0.9954;MQ=64.74;MQ0=0;MQRankSum=-2.800;QD=47.66;ReadPosRankSum=-2.733;VQSLOD=4.4757;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,138,3278	0/0:10,0:10:30.10:0,30,711	0/0:17,0:16:45.10:0,45,1001	0/0:23,0:23:52.48:0,52,1271	0/0:31,0:31:87.24:0,87,1954	0/0:27,0:27:81.28:0,81,1938	0/0:23,0:23:69.24:0,69,1695	1/1:0,31:31:90.26:1572,90,0	0/0:25,0:25:75.21:0,75,1669	0/0:30,0:30:90.26:0,90,2100	0/0:18,0:18:54.12:0,54,1264	0/0:23,0:23:69.20:0,69,1578	0/0:31,0:31:87.30:0,87,2136	0/0:25,0:25:75.26:0,75,1803	0/0:23,0:23:66.16:0,66,1567	0/0:32,0:32:96.32:0,96,2283	0/0:24,0:24:66.35:0,66,1694	0/0:14,0:14:42.11:0,42,907	0/0:22,0:22:66.23:0,66,1620	0/0:29,0:29:84.27:0,84,2003	0/0:30,0:30:87.20:0,87,1890	0/0:25,0:25:72.25:0,72,1721	0/0:20,0:20:57.18:0,57,1347	0/0:20,0:20:54.19:0,54,1326	0/0:25,0:25:72.22:0,72,1673	0/0:35,0:35:99:0,105,2527	0/0:30,0:30:81.22:0,81,1889	0/0:7,0:7:21.07:0,21,512
chr10	43670522	.	A	AGC	1910.86	PASS	AB=0.706;AC=11;AF=0.196;AN=56;BaseQRankSum=10.811;DP=483;FS=134.676;HRun=0;HaplotypeScore=71.7907;InbreedingCoeff=-0.0289;MQ=62.52;MQ0=18;MQRankSum=-9.416;QD=17.53;ReadPosRankSum=3.370;VQSLOD=0.7591;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:36:90.31:0,90,1456	0/0:8,0:7:21.07:0,21,341	0/0:10,0:6:9.03:0,9,147	0/0:15,0:12:27.52:0,28,368	0/0:20,0:20:60.20:0,60,953	0/0:24,0:23:66.21:0,66,1053	0/0:20,0:17:51.12:0,51,752	0/0:28,0:28:84.23:0,84,1271	0/0:25,0:25:69.24:0,69,1114	0/1:10,5:12:99:200,0,260	0/1:3,5:7:33.75:194,0,34	0/0:14,0:13:39.13:0,39,636	0/0:13,0:13:39.13:0,39,631	0/0:21,0:21:54.18:0,54,881	0/0:34,0:31:93.32:0,93,1505	0/0:21,0:20:60.20:0,60,969	0/0:29,0:28:81.22:0,81,1255	0/1:7,5:10:99:233,0,168	0/1:8,2:9:86.85:87,0,195	0/1:7,6:13:99:284,0,165	1/1:1,6:7:14.94:226,15,0	0/0:16,0:16:48.12:0,48,753	0/0:21,0:21:63.21:0,63,1010	0/0:18,0:17:51.15:0,51,806	0/1:9,4:9:99:187,0,126	0/1:4,4:8:99:191,0,161	0/1:8,8:14:99:367,0,159	0/1:3,2:3:39.88:96,0,40
chr10	43671404	.	G	GA	358.79	PASS	AB=1.000;AC=3;AF=0.060;AN=50;BaseQRankSum=-1.628;DP=162;FS=13.847;HRun=0;HaplotypeScore=38.0118;InbreedingCoeff=0.3326;MQ=80.17;MQ0=2;MQRankSum=2.616;QD=12.81;ReadPosRankSum=1.465;VQSLOD=3.0072;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:7:17.04:0,17,115	0/0:2,0:2:5.96:0,6,45	0/0:25,0:10:19.19:0,19,127	0/1:11,0:5:10.81:11,0,17	0/0:2,0:2:5.97:0,6,46	0/0:6,0:6:8.97:0,9,78	0/0:11,0:11:14.71:0,15,128	1/1:2,15:17:44.46:447,44,0	0/0:4,0:4:6:0,6,52	0/0:3,0:2:3:0,3,26	0/0:3,0:3:8.97:0,9,70	0/0:4,0:4:8.64:0,9,46	0/0:3,0:3:8.99:0,9,75	./.	0/0:7,0:7:17.99:0,18,162	0/0:3,0:3:2.99:0,3,24	0/0:1,0:1:0:0,0,0	0/0:9,0:9:22.06:0,22,154	0/0:7,0:7:16.49:0,16,122	0/0:4,0:4:6.47:0,6,53	0/0:9,0:9:20.98:0,21,179	./.	./.	0/0:1,0:1:3:0,3,27	0/0:5,0:5:12.48:0,12,107	0/0:6,0:6:17.81:0,18,132	0/0:5,0:5:11.98:0,12,108	0/0:5,0:5:14.96:0,15,120
chr10	43672558	.	CT	C	858.89	PASS	AC=4;AF=0.074;AN=54;BaseQRankSum=5.928;DP=372;FS=0.000;HRun=7;HaplotypeScore=38.8409;InbreedingCoeff=0.8355;MQ=62.55;MQ0=2;MQRankSum=1.133;QD=25.26;ReadPosRankSum=0.870;VQSLOD=3.4724;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:63.13:0,63,771	1/1:0,10:10:30.07:306,30,0	0/0:5,0:5:14.96:0,15,153	0/0:8,0:3:2.80:0,3,13	0/0:19,0:19:57.17:0,57,704	0/0:15,0:15:39.12:0,39,490	0/0:8,0:8:18.06:0,18,227	0/0:35,0:34:96.29:0,96,1185	0/0:9,0:9:21.07:0,21,264	0/0:19,0:19:48.15:0,48,598	0/0:13,0:13:36.09:0,36,419	./.	0/0:11,0:11:30.10:0,30,377	0/0:10,0:10:27.09:0,27,340	0/0:10,0:10:27.09:0,27,339	0/0:9,0:9:27.09:0,27,340	1/1:2,22:24:66.15:673,66,0	0/0:17,0:17:33.11:0,33,415	0/0:24,0:22:42.13:0,42,527	0/0:13,0:13:39.12:0,39,491	0/0:4,0:4:9.03:0,9,113	0/0:3,0:3:9.03:0,9,113	0/0:5,0:5:15.05:0,15,189	0/0:6,0:6:12.04:0,12,151	0/0:27,0:27:81.25:0,81,1007	0/0:22,0:22:63.19:0,63,778	0/0:18,0:18:51.16:0,51,641	0/0:7,0:7:21.07:0,21,264
chr10	43674287	.	T	TCA	17320.81	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-19.558;DP=818;FS=0.544;HRun=0;HaplotypeScore=84.3723;InbreedingCoeff=1.0000;MQ=90.46;MQ0=1;MQRankSum=-3.871;QD=50.21;ReadPosRankSum=1.233;VQSLOD=5.3436;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:60,0:60:99:0,175,2558	0/0:11,0:11:33.10:0,33,467	0/0:31,0:31:77.84:0,78,1070	0/0:32,0:32:84.20:0,84,1180	0/0:32,0:32:90.30:0,90,1325	0/0:28,0:28:81.26:0,81,1172	0/0:29,0:29:81.25:0,81,1171	0/0:31,0:31:90.30:0,90,1325	0/0:34,0:34:99:0,102,1502	1/1:1,26:27:78.23:1409,78,0	1/1:1,22:25:66.23:1234,66,0	0/0:26,0:26:75.24:0,75,1084	0/0:30,0:30:87.29:0,87,1281	0/0:29,0:29:75.25:0,75,1104	1/1:2,37:40:99:2079,111,0	1/1:2,34:36:90.31:1686,90,0	0/0:19,0:19:57.17:0,57,817	1/1:0,18:19:48.16:899,48,0	1/1:1,16:17:48.16:888,48,0	1/1:0,27:27:78.27:1461,78,0	1/1:5,43:48:99:2248,120,0	0/0:26,0:26:78.26:0,78,1147	0/0:24,0:24:69.22:0,69,995	0/0:31,0:31:93.31:0,93,1369	1/1:0,27:27:75.26:1405,75,0	1/1:0,25:25:75.26:1373,75,0	1/1:1,31:31:84.29:1573,84,0	1/1:0,21:21:57.20:1068,57,0
chr10	43675142	.	TTATATA	T	160.47	PASS	AC=4;AF=0.111;AN=36;BaseQRankSum=1.296;DP=145;FS=0.000;HRun=0;HaplotypeScore=30.9013;InbreedingCoeff=0.3397;MQ=68.73;MQ0=4;MQRankSum=-3.049;QD=10.03;ReadPosRankSum=2.392;VQSLOD=1.2401;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:6:9.03:0,9,222	1/1:0,1:1:3.01:63,3,0	./.	0/0:11,0:5:0.47:0,0,1	./.	0/0:4,0:7:3.01:0,3,39	0/0:1,0:1:3.01:0,3,51	0/0:21,0:19:29.94:0,30,475	0/0:4,0:5:3.01:0,3,79	0/0:2,0:2:6.02:0,6,192	./.	./.	0/0:2,0:2:2.88:0,3,15	0/0:3,0:4:3.01:0,3,39	./.	0/0:2,0:3:6.01:0,6,64	1/1:9,6:15:9.03:189,9,0	0/0:19,0:21:33.08:0,33,932	0/0:6,0:6:9:0,9,220	./.	0/0:2,0:3:3.01:0,3,39	./.	./.	./.	0/0:4,0:4:6.02:0,6,194	./.	0/0:6,0:6:12.04:0,12,295	0/0:1,0:1:3.01:0,3,99
chr10	43675593	.	C	CA	1469.08	PASS	AB=0.935;AC=34;AF=0.607;AN=56;BaseQRankSum=0.709;DP=421;FS=0.000;HRun=14;HaplotypeScore=77.9974;InbreedingCoeff=0.1852;MQ=59.15;MQ0=31;MQRankSum=-0.666;QD=6.50;ReadPosRankSum=-1.438;VQSLOD=2.2991;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:30:31.42:0,31,306	0/1:2,3:5:7.21:67,0,7	0/0:67,0:15:5.06:0,5,50	0/0:60,0:10:6.89:0,7,42	1/1:8,0:14:24.89:125,25,0	0/0:7,0:7:13.84:0,14,82	0/0:13,0:14:1.34:0,1,109	1/1:10,3:13:4.43:105,4,0	0/0:11,1:13:0.03:0,0,119	0/1:9,0:7:8.07:36,0,8	0/1:10,0:10:7.65:42,0,8	1/1:8,0:10:10.19:52,10,0	1/1:4,1:5:10.61:64,11,0	1/1:4,0:7:11.02:51,11,0	1/1:4,2:6:15.85:126,16,0	0/1:5,2:8:4.37:78,0,4	1/1:10,10:22:31.70:366,32,0	0/1:19,0:19:17.11:61,0,17	0/1:13,0:8:13.97:14,0,25	1/1:9,0:9:2.31:44,2,0	0/1:7,0:6:0:0,0,0	1/1:2,0:2:2.84:14,3,0	1/1:8,0:14:34.10:178,34,0	1/1:10,0:11:15.12:75,15,0	0/1:7,0:7:13.36:13,0,30	1/1:13,0:11:10.90:65,11,0	0/1:14,0:14:5.10:52,0,5	0/1:7,0:6:5.56:6,0,11
chr10	43675629	.	CAA	C	2678.51	PASS	AB=0.989;AC=26;AF=0.464;AN=56;BaseQRankSum=-0.064;DP=475;FS=7.184;HRun=11;HaplotypeScore=80.6423;InbreedingCoeff=0.8431;MQ=53.92;MQ0=32;MQRankSum=-2.126;QD=8.70;ReadPosRankSum=-1.432;VQSLOD=0.8931;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:51.17:0,51,769	0/0:1,0:2:5.47:0,5,29	0/1:89,0:11:0.87:1,0,53	0/1:85,0:15:37.65:38,0,71	0/0:9,0:10:23.43:0,23,286	0/0:10,0:10:27.09:0,27,416	0/0:12,0:12:27.08:0,27,385	0/0:20,0:21:33.01:0,33,440	0/0:10,0:12:28.94:0,29,368	1/1:6,6:11:28.80:265,29,0	1/1:2,7:9:20.32:208,20,0	0/0:6,0:6:15.02:0,15,204	0/0:6,0:8:24.01:0,24,291	0/0:7,0:8:21.06:0,21,272	1/1:3,4:7:18.03:185,18,0	1/1:1,5:6:15.02:159,15,0	0/0:18,0:26:51.37:0,51,283	1/1:4,13:16:17.93:335,18,0	1/1:5,15:16:43.31:436,43,0	1/1:4,8:13:35.09:343,35,0	1/1:1,5:6:9.02:95,9,0	0/0:4,0:4:12.04:0,12,185	0/0:10,0:11:30.09:0,30,426	0/0:13,0:14:31.29:0,31,447	1/1:6,5:10:15.76:213,16,0	1/1:4,9:13:14.95:245,15,0	1/1:6,5:12:26.83:248,27,0	1/1:3,2:5:12.50:128,13,0
chr10	43675639	.	AAC	A	1092.44	PASS	AB=0.993;AC=22;AF=0.393;AN=56;BaseQRankSum=6.017;DP=443;FS=17.900;HRun=0;HaplotypeScore=85.9944;InbreedingCoeff=0.1698;MQ=59.03;MQ0=24;MQRankSum=-3.607;QD=4.30;ReadPosRankSum=0.423;VQSLOD=1.2438;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:53.81:0,54,683	0/1:2,0:2:1.49:1,0,3	0/0:74,0:14:11.30:0,11,150	0/1:73,0:21:27.54:28,0,94	0/1:10,0:10:16.47:16,0,81	0/0:11,0:11:32.99:0,33,422	0/0:11,0:11:9.84:0,10,306	0/0:17,0:17:36.30:0,36,472	0/0:10,0:10:10.65:0,11,301	1/1:12,1:12:0.51:105,1,0	0/1:10,1:11:13.78:83,0,14	0/1:8,0:8:33.61:34,0,58	0/0:8,0:8:20.85:0,21,231	0/0:7,0:7:20.07:0,20,173	0/1:7,0:7:1.24:78,0,1	0/1:6,0:6:2.78:70,0,3	0/1:27,0:26:12.58:13,0,236	0/1:20,0:19:10.76:101,0,11	0/1:21,0:18:10.05:110,0,10	1/1:11,1:12:31.24:179,31,0	0/1:6,0:6:12.39:25,0,12	0/0:4,0:4:12.04:0,12,174	0/0:12,0:11:30.02:0,30,372	0/0:14,0:14:6.20:0,6,369	1/1:10,0:9:23.84:146,24,0	0/1:12,0:12:8.92:40,0,9	1/1:10,1:11:27.50:174,27,0	1/1:5,0:5:13.16:66,13,0
chr10	43675708	.	CA	C	827.90	PASS	AB=0.819;AC=13;AF=0.232;AN=56;BaseQRankSum=0.462;DP=365;FS=0.576;HRun=13;HaplotypeScore=55.0923;InbreedingCoeff=0.4345;MQ=69.03;MQ0=5;MQRankSum=1.475;QD=6.90;ReadPosRankSum=-0.271;VQSLOD=1.9155;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:16:41.76:0,42,373	1/1:1,2:3:5.96:44,6,0	0/0:18,0:9:5.60:0,6,38	0/1:14,0:8:8.60:9,0,36	0/0:10,1:11:8.13:0,8,237	0/0:12,0:13:26.88:0,27,248	0/0:12,0:12:32.85:0,33,305	1/1:9,11:20:29.72:216,30,0	0/0:10,0:10:24.03:0,24,228	0/1:10,2:13:22.95:23,0,110	0/0:10,0:10:18.03:0,18,175	0/0:6,0:16:45.95:0,46,259	0/0:7,0:7:14.74:0,15,105	0/0:1,0:6:8.64:0,9,48	1/1:2,4:6:11.93:88,12,0	0/1:1,6:7:8.29:110,0,8	1/1:6,25:33:67.68:489,68,0	0/0:27,0:28:65.74:0,66,598	0/0:24,0:24:44.21:0,44,383	0/1:4,1:6:10.06:10,0,61	0/0:7,0:7:15.01:0,15,141	0/0:2,0:3:7.08:0,7,42	0/0:6,0:13:23.47:0,23,167	0/0:1,0:13:31.25:0,31,157	0/0:8,1:11:1.80:0,2,152	0/0:13,0:14:29.85:0,30,262	0/0:13,0:13:21.02:0,21,199	0/1:14,2:17:4.92:5,0,267
chr10	43677250	.	A	AGTGTGT	6881.23	PASS	AB=1.000;AC=43;AF=0.796;AN=54;BaseQRankSum=5.028;DP=641;FS=39.243;HRun=0;HaplotypeScore=194.0636;InbreedingCoeff=0.6938;MQ=61.61;MQ0=12;MQRankSum=-5.329;QD=14.04;ReadPosRankSum=-1.553;VQSLOD=2.7597;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:22,17:44:15.05:377,15,0	1/1:9,0:9:2.80:43,3,0	0/0:32,0:21:4.68:0,5,92	0/0:27,0:17:3.01:0,3,35	1/1:6,4:14:3.01:36,3,0	0/0:14,0:18:33.11:0,33,612	0/0:28,0:28:39.11:0,39,702	1/1:28,0:26:27.09:482,27,0	0/0:30,0:31:48.03:0,48,842	1/1:29,0:28:34.67:667,35,0	./.	1/1:17,0:16:9.03:209,9,0	1/1:18,0:18:27.09:453,27,0	1/1:19,0:19:18.06:344,18,0	1/1:31,0:29:14.97:194,15,0	1/1:15,0:13:12.41:234,12,0	1/1:27,0:26:27.09:540,27,0	1/1:22,0:22:30.10:608,30,0	1/1:20,0:16:18.02:254,18,0	1/1:20,0:19:2.02:62,2,0	1/1:49,0:48:6:73,6,0	1/1:14,0:14:15.05:293,15,0	1/1:17,0:17:9.03:163,9,0	0/1:20,0:17:0:0,0,0	1/1:20,0:17:8.92:150,9,0	1/1:32,0:30:60.20:1101,60,0	1/1:16,0:14:24.08:461,24,0	1/1:7,0:5:6.02:138,6,0
chr10	43680237	.	G	GA	11652.60	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-16.702;DP=644;FS=5.489;HRun=1;HaplotypeScore=60.7564;InbreedingCoeff=1.0000;MQ=92.92;MQ0=0;MQRankSum=-3.138;QD=40.46;ReadPosRankSum=3.557;VQSLOD=5.5002;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:93.24:0,93,1158	0/0:16,0:16:42.12:0,42,527	0/0:33,0:33:84.69:0,85,1039	0/0:23,0:23:69.22:0,69,877	0/0:25,0:25:72.22:0,72,921	0/0:20,0:20:51.08:0,51,635	0/0:21,0:21:60.15:0,60,760	0/0:31,0:31:84.23:0,84,1029	0/0:20,0:20:60.20:0,60,778	1/1:1,37:38:99:1635,111,0	1/1:1,14:15:42.01:567,42,0	0/0:29,0:29:84.26:0,84,1075	0/0:18,0:18:54.15:0,54,683	0/0:15,0:15:45.14:0,45,572	1/1:0,20:20:51.17:764,51,0	1/1:1,20:21:60.20:898,60,0	0/0:23,0:23:66.20:0,66,841	1/1:0,20:20:39.13:584,39,0	1/1:2,16:18:54.17:777,54,0	1/1:1,18:19:54.18:809,54,0	1/1:3,33:36:93.32:1393,93,0	0/0:18,0:18:54.14:0,54,670	0/0:16,0:16:48.16:0,48,622	0/0:16,0:16:42.13:0,42,532	1/1:0,21:21:60.20:899,60,0	1/1:0,31:31:93.31:1391,93,0	1/1:0,23:23:63.21:944,63,0	1/1:0,26:26:66.22:989,66,0
chr10	43681807	.	CA	C	12440.25	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=17.262;DP=819;FS=4.145;HRun=2;HaplotypeScore=102.7719;InbreedingCoeff=0.9999;MQ=82.18;MQ0=0;MQRankSum=-2.514;QD=36.48;ReadPosRankSum=0.659;VQSLOD=4.8741;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:65,0:65:99:0,193,2846	0/0:10,0:10:30.10:0,30,449	0/0:21,0:21:63.17:0,63,901	0/0:24,0:24:69.04:0,69,942	0/0:33,0:33:99:0,99,1483	0/0:20,0:20:60.20:0,60,899	0/0:38,0:38:99:0,111,1658	0/0:34,0:34:99:0,99,1462	0/0:34,0:34:99:0,99,1478	1/1:0,28:28:81.26:1052,81,0	1/1:0,19:19:54.18:700,54,0	0/0:36,0:36:99:0,108,1618	0/0:26,0:26:78.25:0,78,1150	0/0:21,0:21:63.20:0,63,919	1/1:0,34:34:99:1324,102,0	1/1:1,30:31:45.31:1083,45,0	0/0:44,0:44:99:0,132,1977	1/1:0,30:30:78.25:1013,78,0	1/1:3,22:25:69.21:883,69,0	1/1:1,19:20:54.18:701,54,0	1/1:0,68:68:99:2414,187,0	0/0:23,0:23:66.22:0,66,984	0/0:20,0:20:57.18:0,57,831	0/0:29,0:29:84.27:0,84,1232	1/1:0,16:16:45.15:584,45,0	1/1:0,24:24:72.23:935,72,0	1/1:0,35:35:99:1322,102,0	1/1:0,11:11:33.11:428,33,0
chr10	43683557	.	T	TG	1808.17	PASS	AB=0.721;AC=18;AF=0.321;AN=56;BaseQRankSum=1.371;DP=540;FS=11.496;HRun=9;HaplotypeScore=78.2097;InbreedingCoeff=0.7391;MQ=80.79;MQ0=0;MQRankSum=-1.248;QD=9.83;ReadPosRankSum=0.691;VQSLOD=1.2872;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,105,908	1/1:2,6:8:6.01:65,6,0	0/0:17,0:17:32.84:0,33,266	0/0:21,0:22:32.56:0,33,257	1/1:10,2:19:2.88:15,3,0	0/0:15,0:15:38.95:0,39,331	0/0:19,0:20:44.01:0,44,371	0/0:23,0:25:40.94:0,41,336	0/0:25,0:25:62.95:0,63,541	0/0:30,0:30:65.95:0,66,568	0/0:11,0:11:26.99:0,27,233	0/1:6,9:15:0.16:178,0,0	0/1:4,11:15:1.93:208,0,2	1/1:13,9:22:35.92:372,36,0	0/1:16,0:16:0.23:2,0,0	1/1:14,0:14:6.13:16,6,0	1/1:7,23:30:51.14:564,51,0	0/0:27,0:27:74.98:0,75,650	0/0:17,0:17:32.95:0,33,280	0/0:15,0:15:26.97:0,27,233	0/0:21,0:22:58.98:0,59,493	0/1:8,7:15:5:178,0,5	1/1:7,11:18:15.04:166,15,0	1/1:1,11:12:21.05:229,21,0	0/0:24,0:24:61.78:0,62,521	0/0:26,0:26:56.96:0,57,489	0/0:16,0:16:44.97:0,45,387	0/0:4,0:4:6:0,6,52
chr10	43683566	.	GT	G	687.41	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=3.763;DP=520;FS=9.289;HRun=1;HaplotypeScore=68.5618;InbreedingCoeff=0.7794;MQ=82.66;MQ0=0;MQRankSum=-2.627;QD=14.03;ReadPosRankSum=1.063;VQSLOD=2.1408;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,135,1599	0/0:7,0:7:5.35:0,5,27	0/0:19,0:19:32.35:0,32,618	0/0:24,0:24:51.87:0,52,628	0/0:12,0:12:26.64:0,27,184	0/0:15,0:15:45.06:0,45,563	0/0:22,0:22:53.16:0,53,712	0/0:27,0:27:72.88:0,73,871	0/0:23,0:23:68.86:0,69,827	0/0:22,0:22:66.01:0,66,871	0/0:10,0:10:30:0,30,364	0/0:14,0:14:34.76:0,35,245	0/0:15,0:15:30.41:0,30,204	0/1:17,0:17:1.03:1,0,277	1/1:0,17:17:20.94:265,21,0	1/1:0,15:15:39.13:542,39,0	0/0:28,0:28:52.34:0,52,368	0/0:30,0:30:87.18:0,87,1103	0/0:13,0:14:35.11:0,35,491	0/0:12,0:12:33.06:0,33,412	0/0:25,0:25:70.53:0,71,885	0/0:12,0:12:25.76:0,26,182	0/0:16,0:16:34.32:0,34,248	0/0:15,0:15:30.56:0,31,190	0/0:24,0:24:70.97:0,71,866	0/0:21,0:21:63.15:0,63,829	0/0:16,0:16:48.02:0,48,585	0/0:2,0:2:6.02:0,6,84
chr10	43685465	.	T	TGC	652.88	PASS	AB=0.979;AC=14;AF=0.269;AN=52;BaseQRankSum=9.073;DP=484;FS=0.000;HRun=0;HaplotypeScore=128.7261;InbreedingCoeff=0.1729;MQ=50.09;MQ0=7;MQRankSum=-8.565;QD=4.38;ReadPosRankSum=0.282;VQSLOD=2.5871;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:36:69.17:0,69,1041	1/1:6,2:8:3.94:51,4,0	0/0:38,0:15:26.91:0,27,399	0/0:35,0:13:28.80:0,29,356	0/0:10,0:10:24.06:0,24,343	0/0:13,0:13:30.04:0,30,370	0/0:26,0:26:73.89:0,74,1022	0/0:23,0:18:47.18:0,47,551	0/0:20,0:20:30.39:0,30,662	0/1:17,0:17:43.08:137,0,43	./.	0/0:20,0:19:54.15:0,54,769	0/0:13,0:13:36.05:0,36,480	0/0:19,0:19:54.15:0,54,782	./.	0/1:4,0:4:0:0,0,0	0/1:23,6:28:99:363,0,130	0/1:15,0:14:25.92:43,0,26	0/1:10,0:9:19.82:37,0,20	0/0:4,0:4:2.79:0,3,14	0/1:32,0:29:11.39:11,0,38	0/0:11,0:11:21.07:0,21,321	0/0:13,0:13:35.95:0,36,516	0/0:45,0:44:99:0,99,1393	1/1:7,0:7:2.11:8,2,0	0/1:16,0:16:43.90:111,0,44	0/1:8,0:7:5.09:17,0,5	1/1:3,0:3:4.50:17,4,0
chr10	43685471	.	TGCC	T	358.65	PASS	AB=0.939;AC=11;AF=0.204;AN=54;BaseQRankSum=7.250;DP=477;FS=0.782;HRun=0;HaplotypeScore=125.9867;InbreedingCoeff=0.0882;MQ=48.93;MQ0=7;MQRankSum=-7.360;QD=3.20;ReadPosRankSum=-1.514;VQSLOD=2.3212;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:36:74.02:0,74,1517	0/1:8,0:8:22.44:22,0,72	0/0:40,0:16:42.11:0,42,836	0/0:34,1:12:16.30:0,16,394	0/0:12,0:12:30.10:0,30,689	0/0:14,0:14:36.12:0,36,815	0/0:29,0:29:80.56:0,81,1805	0/0:22,0:18:7.28:0,7,921	0/0:20,1:21:17.30:0,17,1201	0/1:14,2:16:66.01:66,0,629	./.	0/0:18,0:17:45.15:0,45,1000	0/0:11,0:11:30.10:0,30,707	0/0:19,0:19:55.43:0,55,1236	0/0:3,2:5:0:0,0,0	0/0:2,1:3:0:0,0,0	0/1:27,0:26:99:112,0,463	0/1:12,1:12:99:145,0,169	0/0:5,0:5:11.96:0,12,200	1/1:5,0:5:3.01:33,3,0	0/0:30,2:30:10.50:0,11,176	0/0:14,0:14:21.07:0,21,496	0/1:11,1:12:14.91:15,0,734	0/0:40,1:40:85.27:0,85,1957	1/1:5,1:6:2.93:21,3,0	0/1:16,1:17:57.38:57,0,725	0/1:7,1:7:24.71:25,0,123	0/0:1,0:1:3.01:0,3,71
chr10	43685472	.	GC	G	340.41	PASS	AB=0.831;AC=11;AF=0.204;AN=54;BaseQRankSum=7.616;DP=459;FS=3.958;HRun=2;HaplotypeScore=109.8909;InbreedingCoeff=0.0702;MQ=49.22;MQ0=7;MQRankSum=-7.053;QD=2.93;ReadPosRankSum=-1.631;VQSLOD=-0.4903;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:35:65.88:0,66,928	0/1:4,4:8:29.47:29,0,31	0/0:40,0:15:41.92:0,42,564	0/0:32,1:10:9.74:0,10,204	0/0:12,0:12:30.10:0,30,447	0/0:14,0:14:36.12:0,36,530	0/0:28,0:29:78.03:0,78,1139	0/1:21,2:19:23.17:23,0,642	0/0:21,0:21:24.43:0,24,756	0/1:13,0:13:23.92:24,0,424	./.	0/0:17,0:16:45.14:0,45,637	0/0:10,0:10:30.10:0,30,448	0/0:19,0:19:54.16:0,54,770	0/0:4,1:5:0:0,0,0	0/0:2,0:2:0:0,0,0	0/1:19,7:25:99:167,0,219	0/1:8,4:12:99:113,0,108	0/0:5,0:5:14.98:0,15,172	1/1:4,1:5:3.01:39,3,0	0/0:25,2:26:10.23:0,10,113	0/0:14,0:14:21.07:0,21,314	0/0:12,0:12:1.98:0,2,457	0/0:38,1:39:84.26:0,84,1236	1/1:3,1:4:2.59:23,3,0	0/1:15,2:17:29.83:30,0,464	0/1:6,2:7:29.72:30,0,80	0/0:1,0:1:3.01:0,3,45
chr10	43685473	.	CCGT	C	142.24	PASS	AB=0.960;AC=11;AF=0.204;AN=54;BaseQRankSum=6.562;DP=459;FS=3.181;HRun=0;HaplotypeScore=124.7761;InbreedingCoeff=0.0710;MQ=49.20;MQ0=5;MQRankSum=-5.527;QD=1.18;ReadPosRankSum=-1.556;VQSLOD=2.4048;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:73.09:0,73,1553	0/1:7,1:8:40.29:40,0,88	0/0:41,0:16:48.12:0,48,924	0/0:32,0:8:7.45:0,7,340	0/0:12,0:12:30.10:0,30,709	0/0:15,0:15:39.13:0,39,920	0/0:29,0:29:84.70:0,85,1885	0/1:25,0:21:17.15:17,0,1137	0/0:21,0:21:22.80:0,23,1244	0/1:12,0:13:23.97:24,0,674	./.	0/0:16,0:16:45.14:0,45,969	0/0:10,0:10:30.10:0,30,738	0/0:19,0:19:55.41:0,55,1233	0/0:3,1:4:0:0,0,0	0/0:2,0:2:0:0,0,0	0/1:21,3:26:99:115,0,500	0/1:13,0:13:39.33:39,0,191	0/0:5,0:5:13.28:0,13,236	1/1:5,0:5:2.88:15,3,0	0/0:27,0:26:10.28:0,10,201	0/0:14,0:14:21.07:0,21,517	0/0:12,0:12:2:0,2,749	0/0:39,0:38:85.25:0,85,2005	1/1:4,0:4:1.28:4,1,0	0/1:17,0:17:12.20:12,0,769	0/1:9,0:8:1.98:2,0,155	0/0:1,0:1:3.01:0,3,73
chr10	43685479	.	GTGC	G	43.85	PASS	AB=0.899;AC=8;AF=0.148;AN=54;BaseQRankSum=5.776;DP=467;FS=1.153;HRun=0;HaplotypeScore=132.2703;InbreedingCoeff=0.2746;MQ=48.97;MQ0=4;MQRankSum=-4.915;QD=0.65;ReadPosRankSum=0.424;VQSLOD=2.4475;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:67.86:0,68,1552	0/1:4,4:8:40.26:40,0,110	0/0:44,0:14:42.14:0,42,927	0/0:32,0:7:15.03:0,15,282	0/0:13,0:13:33.02:0,33,753	0/0:16,0:16:42.14:0,42,988	0/0:30,0:30:87.75:0,88,2033	0/0:23,0:20:60.13:0,60,1254	0/0:21,0:21:23.14:0,23,1279	0/0:14,0:14:38.34:0,38,813	./.	0/0:13,0:13:36.11:0,36,838	0/0:10,0:10:30.10:0,30,739	0/0:21,0:21:52.41:0,52,1180	0/0:5,0:5:0:0,0,0	0/0:2,0:2:0:0,0,0	0/1:24,2:25:73.38:73,0,487	0/1:14,0:14:18.26:18,0,271	0/0:5,0:5:14.99:0,15,258	1/1:6,0:6:3.01:17,3,0	0/0:30,0:27:12.46:0,12,220	0/0:14,0:14:21.07:0,21,517	0/0:12,0:12:31.92:0,32,744	0/0:39,0:38:85.26:0,85,1971	1/1:4,0:4:1.34:4,1,0	0/0:17,0:17:42.86:0,43,856	0/1:9,0:8:4.82:5,0,171	0/0:2,0:2:5.61:0,6,80
chr10	43685480	.	TGCC	T	165.18	PASS	AB=0.909;AC=8;AF=0.148;AN=54;BaseQRankSum=6.100;DP=459;FS=5.442;HRun=0;HaplotypeScore=128.4877;InbreedingCoeff=0.2821;MQ=49.24;MQ0=3;MQRankSum=-4.741;QD=2.47;ReadPosRankSum=-0.518;VQSLOD=1.9359;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:75.62:0,76,1536	0/1:8,0:8:22.50:22,0,73	0/0:42,0:14:41.97:0,42,811	0/0:31,0:7:15:0,15,240	0/0:13,0:13:33.02:0,33,758	0/0:15,0:15:42.14:0,42,943	0/0:30,0:30:87.25:0,87,1982	0/0:22,0:20:55.41:0,55,984	0/0:21,0:21:35.23:0,35,1216	0/0:14,0:14:35.30:0,35,662	./.	0/0:12,0:12:33.11:0,33,775	0/0:10,0:10:30.10:0,30,708	0/0:21,0:21:49.41:0,49,1120	0/0:5,0:5:0.47:0,0,1	0/0:2,0:2:0:0,0,0	0/1:21,4:24:99:108,0,356	0/1:12,2:14:97.69:98,0,218	0/0:5,0:5:12:0,12,192	1/1:5,1:6:3.28:23,3,0	0/0:28,1:26:12.47:0,12,199	0/0:14,0:14:21.07:0,21,496	0/0:11,0:11:30.10:0,30,709	0/0:38,1:38:85.23:0,85,1888	1/1:5,0:5:2.88:20,3,0	0/0:17,0:17:34.91:0,35,693	0/1:8,1:8:18.18:18,0,138	0/0:2,0:2:5.05:0,5,61
chr10	43685483	.	C	CGT	1411.53	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=6.512;DP=481;FS=0.000;HRun=0;HaplotypeScore=128.1087;InbreedingCoeff=0.5537;MQ=48.82;MQ0=4;MQRankSum=-7.017;QD=11.20;ReadPosRankSum=-2.256;VQSLOD=2.9505;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:65.76:0,66,825	0/0:8,0:8:8.02:0,8,35	0/0:44,0:14:23.47:0,23,243	0/0:30,0:6:13.24:0,13,132	0/0:13,0:13:32.93:0,33,432	0/0:16,0:16:45.09:0,45,555	0/0:33,0:33:91.14:0,91,1153	1/1:12,10:21:12.06:410,12,0	0/0:22,0:22:42.66:0,43,628	1/1:14,0:14:27.90:334,28,0	0/0:2,0:2:0:0,0,0	0/0:12,0:12:27.09:0,27,356	0/0:13,0:13:33.09:0,33,422	0/0:22,0:22:45.15:0,45,595	0/1:8,0:8:1.89:2,0,15	0/0:3,0:3:0:0,0,0	0/0:26,0:25:1.01:0,1,89	0/1:14,0:14:26.39:123,0,26	1/1:5,0:5:11.63:131,12,0	0/0:5,0:5:2.71:0,3,13	0/1:35,0:31:17.63:64,0,18	0/0:15,0:15:21.05:0,21,262	0/0:11,0:11:30.10:0,30,398	0/0:41,0:40:78.03:0,78,998	0/0:6,0:5:2.90:0,3,19	1/1:18,0:18:11.34:296,11,0	1/1:8,0:7:2.10:135,2,0	1/1:1,1:2:6.02:82,6,0
chr10	43685487	.	TGTGC	T	69.95	PASS	AB=0.964;AC=4;AF=0.071;AN=56;BaseQRankSum=3.686;DP=508;FS=4.211;HRun=0;HaplotypeScore=139.1266;InbreedingCoeff=0.1034;MQ=48.56;MQ0=5;MQRankSum=-2.425;QD=1.25;ReadPosRankSum=-2.192;VQSLOD=2.3230;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:66.68:0,67,1484	1/1:6,4:10:1.18:54,1,0	0/0:47,0:15:29.34:0,29,344	0/0:37,0:5:13.79:0,14,248	0/0:13,0:13:34.30:0,34,821	0/0:17,0:17:48.06:0,48,1089	0/0:36,0:36:91.78:0,92,2155	0/1:20,0:19:72.77:73,0,182	0/0:23,0:23:59.89:0,60,1351	0/0:16,0:16:39.25:0,39,624	0/0:2,0:2:3.01:0,3,52	0/0:12,0:12:26.97:0,27,517	0/0:14,0:14:33.07:0,33,793	0/0:22,0:22:48:0,48,1065	0/0:9,0:8:3.01:0,3,78	0/0:4,0:4:3.01:0,3,57	0/1:24,2:25:18.48:42,0,18	0/0:14,0:15:1.35:0,1,317	0/0:8,0:8:18.25:0,18,208	0/0:5,0:5:2.52:0,3,14	0/0:36,0:32:16.75:0,17,222	0/0:16,0:16:21.01:0,21,406	0/0:12,0:12:30.10:0,30,745	0/0:41,0:40:80.85:0,81,1843	0/0:5,0:5:2.42:0,2,18	0/0:17,0:17:43.91:0,44,542	0/0:8,0:7:12.79:0,13,164	0/0:2,0:2:5.97:0,6,71
chr10	43685489	.	T	TGC	1822.80	PASS	AB=0.735;AC=18;AF=0.321;AN=56;BaseQRankSum=4.770;DP=513;FS=3.309;HRun=0;HaplotypeScore=121.7122;InbreedingCoeff=0.6449;MQ=46.83;MQ0=7;MQRankSum=-6.371;QD=13.31;ReadPosRankSum=-0.871;VQSLOD=3.2126;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:64.36:0,64,828	0/0:6,0:10:8.52:0,9,43	0/0:48,0:14:26.92:0,27,257	0/0:39,0:5:12.91:0,13,143	0/0:13,0:13:34.04:0,34,446	0/0:17,0:17:51.05:0,51,645	0/0:37,0:37:99:0,111,1301	0/1:19,0:18:99:150,0,163	0/0:23,0:23:57.96:0,58,717	1/1:8,8:16:17.75:492,18,0	1/1:2,0:2:2.99:23,3,0	0/0:10,0:10:27.05:0,27,330	0/0:14,0:14:33.57:0,34,454	0/0:20,0:20:48.11:0,48,613	0/0:9,0:8:2.76:0,3,40	0/0:4,0:4:3:0,3,25	0/0:10,0:26:13.26:0,13,130	1/1:9,5:15:0.80:208,1,0	0/1:3,4:7:2.11:192,0,2	0/1:1,4:5:0.21:0,0,0	1/1:23,16:34:11.67:151,12,0	0/0:17,0:17:18.05:0,18,239	0/0:13,0:13:30.09:0,30,411	0/0:42,0:40:78.04:0,78,1048	0/1:4,2:5:0.22:0,0,0	1/1:11,7:18:39.20:501,39,0	1/1:2,6:7:11.96:197,12,0	1/1:1,1:2:6.01:79,6,0
chr10	43685511	.	TGCC	T	363.29	PASS	AB=0.928;AC=7;AF=0.130;AN=54;BaseQRankSum=6.417;DP=530;FS=1.706;HRun=0;HaplotypeScore=125.2999;InbreedingCoeff=-0.0120;MQ=41.28;MQ0=14;MQRankSum=-5.867;QD=5.12;ReadPosRankSum=-3.491;VQSLOD=1.9516;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:52.59:0,53,1132	0/0:8,0:8:9.93:0,10,125	0/0:59,0:7:21.05:0,21,373	0/0:39,0:5:8.82:0,9,138	0/0:12,0:12:30:0,30,641	0/0:14,0:14:39.13:0,39,916	0/0:34,2:35:99:0,100,2221	0/0:20,0:18:16.11:0,16,763	0/0:21,0:21:49.07:0,49,1228	0/1:16,1:16:70.17:70,0,563	./.	0/0:9,0:9:12.03:0,12,238	0/0:13,0:13:29.09:0,29,699	0/0:19,0:19:42.14:0,42,931	0/0:6,4:8:3.44:0,3,69	0/0:2,3:5:6.28:0,6,82	0/0:28,0:27:8.94:0,9,756	0/1:15,1:16:99:166,0,502	0/1:11,1:11:99:111,0,279	1/1:5,0:5:1.63:6,2,0	0/0:41,7:38:20.78:0,21,379	0/0:18,0:18:12.04:0,12,283	0/0:13,0:13:21.07:0,21,486	0/0:38,1:38:63.19:0,63,1356	0/0:8,1:8:3.91:0,4,72	0/1:12,3:14:99:107,0,590	0/0:8,0:7:12.51:0,13,236	0/1:6,0:6:21.95:22,0,61
chr10	43685522	.	TGC	T	317.93	PASS	AB=0.990;AC=14;AF=0.259;AN=54;BaseQRankSum=7.864;DP=548;FS=11.211;HRun=0;HaplotypeScore=122.4039;InbreedingCoeff=0.1051;MQ=38.90;MQ0=26;MQRankSum=-7.645;QD=1.25;ReadPosRankSum=0.171;VQSLOD=1.1589;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:38.80:0,39,421	0/0:5,2:7:2.89:0,3,58	0/1:47,1:6:10.89:11,0,158	0/1:38,0:3:1.03:1,0,53	0/0:14,0:13:23.95:0,24,421	0/0:18,0:18:48.05:0,48,771	0/0:34,0:33:93.10:0,93,1552	0/0:17,0:14:17.73:0,18,120	0/0:20,0:20:51.55:0,52,821	0/1:20,0:16:24.27:120,0,24	./.	0/0:12,0:12:5.51:0,6,114	0/0:18,0:17:28.11:0,28,397	0/0:22,0:19:32.84:0,33,592	1/1:11,0:9:2.55:19,3,0	0/1:6,0:5:3.03:15,0,3	0/0:26,1:26:4.62:0,5,576	0/1:17,0:17:34.62:54,0,35	0/1:10,0:8:0.59:61,0,1	0/1:9,0:9:0.01:0,0,0	0/1:58,0:43:1.52:2,0,43	0/0:18,0:18:12.01:0,12,173	0/0:12,0:11:11.93:0,12,90	0/0:35,0:33:42.02:0,42,630	0/0:11,0:10:1.55:0,2,5	0/1:20,0:17:51.05:134,0,51	1/1:10,0:9:2.66:15,3,0	0/1:7,0:7:17.50:20,0,17
chr10	43685524	.	CGT	C	747.07	PASS	AB=0.897;AC=19;AF=0.365;AN=52;BaseQRankSum=6.982;DP=541;FS=1.389;HRun=0;HaplotypeScore=119.1699;InbreedingCoeff=0.2225;MQ=38.40;MQ0=27;MQRankSum=-6.429;QD=3.38;ReadPosRankSum=0.082;VQSLOD=2.3206;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,1:25:11.26:0,11,195	0/0:7,0:7:3:0,3,50	0/0:46,0:6:0.10:0,0,100	0/0:39,0:3:3.01:0,3,51	0/0:13,0:12:21.07:0,21,349	0/0:18,1:20:45.13:0,45,728	0/0:34,0:33:87.26:0,87,1364	0/1:13,0:10:16.16:23,0,16	0/0:20,0:20:42.14:0,42,710	0/1:16,4:17:28.96:165,0,29	./.	0/0:11,0:11:5.51:0,6,92	0/0:17,0:16:24.23:0,24,335	0/0:22,0:19:29.85:0,30,487	1/1:4,6:8:3:39,3,0	0/1:4,2:5:2.64:34,0,3	0/1:26,1:26:20.62:21,0,473	1/1:16,1:17:7.88:154,8,0	1/1:9,2:8:0.96:103,1,0	0/1:6,2:8:0:0,0,0	1/1:53,5:46:1.10:35,1,0	0/0:19,0:19:8.99:0,9,116	./.	0/0:34,0:32:27.09:0,27,437	1/1:10,1:10:0.34:21,0,0	0/1:20,1:18:27.07:149,0,27	1/1:9,1:9:14.55:102,15,0	0/1:6,0:6:51.24:54,0,51
chr10	43685530	.	T	TGTGC	1886.50	PASS	AB=0.871;AC=16;AF=0.308;AN=52;BaseQRankSum=5.616;DP=530;FS=1.293;HRun=0;HaplotypeScore=128.5940;InbreedingCoeff=0.2737;MQ=37.70;MQ0=28;MQRankSum=-6.101;QD=9.83;ReadPosRankSum=-0.274;VQSLOD=3.2040;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:20:10.78:0,11,212	0/0:7,0:7:2.25:0,2,53	0/0:37,0:5:0.10:0,0,108	0/0:33,0:2:3.01:0,3,57	0/0:12,0:11:20.96:0,21,397	0/0:21,0:20:48.12:0,48,834	0/0:39,0:36:98.83:0,99,1634	0/1:11,0:8:15.06:24,0,15	0/0:18,0:18:43.03:0,43,784	0/1:15,5:16:6.03:395,0,6	./.	0/0:12,0:12:5.28:0,5,106	0/0:18,0:17:26.04:0,26,324	0/0:21,0:18:30.01:0,30,541	1/1:10,0:8:3.01:40,3,0	0/1:11,0:9:9.94:10,0,17	0/0:26,0:25:27.73:0,28,562	1/1:12,4:15:16.60:368,17,0	0/1:11,2:9:9.33:143,0,9	0/0:8,1:9:0:0,0,0	1/1:54,6:45:2.87:63,3,0	0/0:19,0:20:8.84:0,9,133	./.	0/0:34,0:31:27.09:0,27,485	1/1:7,6:11:4.81:30,5,0	0/1:16,5:18:66.86:515,0,67	1/1:6,5:9:13.33:334,13,0	0/1:4,2:6:45.43:120,0,45
chr10	43685548	.	TGTGC	T	531.89	PASS	AB=1.000;AC=13;AF=0.260;AN=50;BaseQRankSum=7.554;DP=465;FS=0.000;HRun=0;HaplotypeScore=105.0961;InbreedingCoeff=0.1277;MQ=38.17;MQ0=28;MQRankSum=-7.457;QD=4.19;ReadPosRankSum=0.761;VQSLOD=1.6008;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:19:9.48:0,9,117	./.	0/0:8,0:2:6.02:0,6,90	0/0:12,0:2:5.81:0,6,65	0/0:15,0:14:14.88:0,15,353	0/0:24,0:23:53.90:0,54,1330	0/0:37,0:32:93.32:0,93,2286	0/0:7,0:5:5.69:0,6,103	0/0:19,0:18:44.50:0,44,1127	0/1:19,0:14:68.73:136,0,69	./.	0/0:13,0:13:2.45:0,2,66	0/1:17,0:16:7.86:8,0,176	0/0:22,0:19:14.87:0,15,183	0/0:8,4:9:3.01:0,3,38	0/0:10,3:11:8:0,8,93	1/1:6,1:6:7.29:53,7,0	0/1:11,0:10:13.04:25,0,13	0/1:16,0:8:46.20:95,0,46	0/1:7,0:7:0:0,0,0	0/0:58,0:42:0.20:0,0,0	0/0:19,0:19:2.50:0,3,66	./.	0/0:41,0:36:12.01:0,12,194	1/1:18,0:16:0.75:3,1,0	0/1:16,0:13:72.15:224,0,72	1/1:10,0:8:9.60:83,10,0	0/1:6,0:5:39.19:39,0,68
chr10	43685552	.	CGCGTGT	C	383.95	PASS	AB=0.830;AC=16;AF=0.333;AN=48;BaseQRankSum=4.527;DP=453;FS=1.042;HRun=0;HaplotypeScore=112.4696;InbreedingCoeff=0.3733;MQ=38.59;MQ0=23;MQRankSum=-4.609;QD=2.41;ReadPosRankSum=0.994;VQSLOD=1.8700;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:16,6:19:1.77:47,2,0	./.	0/0:5,0:1:2.94:0,3,18	0/0:10,0:2:2.88:0,3,15	0/0:15,0:15:12.02:0,12,249	0/0:26,0:25:59.86:0,60,1391	0/0:37,0:33:81.20:0,81,1921	0/0:5,0:4:6.02:0,6,114	0/0:18,0:17:41.42:0,41,1134	0/0:10,0:14:17.46:0,17,151	./.	0/1:2,11:13:0.04:0,0,0	1/1:4,13:16:15.52:329,16,0	1/1:4,13:15:2.98:22,3,0	0/0:13,0:10:0.47:0,0,1	0/1:13,0:11:7.07:7,0,36	1/1:6,0:5:4.56:37,5,0	0/0:8,0:11:13.33:0,13,105	0/0:10,0:9:2.61:0,3,40	1/1:3,0:7:0.47:1,0,0	0/0:43,0:42:2.79:0,3,7	0/1:3,16:19:0.06:0,0,0	./.	./.	0/1:9,0:16:0.16:0,0,1	0/1:8,0:14:55.84:56,0,101	0/1:8,0:8:1.94:10,0,2	0/0:5,0:6:7.88:0,8,97
chr10	43685554	.	CGTGTGCGTGTGTGTGCGTGTGTGT	C	191.48	PASS	AB=0.986;AC=17;AF=0.340;AN=50;BaseQRankSum=2.736;DP=461;FS=0.000;HRun=0;HaplotypeScore=170.3968;InbreedingCoeff=0.0623;MQ=38.50;MQ0=25;MQRankSum=-3.027;QD=0.93;ReadPosRankSum=-2.690;VQSLOD=2.2462;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:21,0:18:0.37:0,0,0	./.	0/0:6,0:1:3.01:0,3,115	0/0:9,0:1:3.01:0,3,118	1/1:8,7:15:1.45:4,1,0	0/0:26,0:25:48:0,48,2218	0/0:39,0:34:63.65:0,64,2517	0/0:6,0:5:7.84:0,8,167	0/0:20,0:19:42.14:0,42,1669	0/1:20,0:16:93.03:93,0,104	./.	0/0:13,0:13:0.93:0,1,1	0/0:17,0:16:14.82:0,15,170	0/1:17,0:15:0.05:0,0,0	1/1:14,0:11:2.72:30,3,0	0/0:13,0:11:1.53:0,2,3	0/1:6,0:6:23.52:24,0,41	0/0:13,0:12:0.05:0,0,74	0/1:16,0:10:20.24:32,0,20	1/1:9,0:8:0.94:2,1,0	0/0:59,0:45:1.74:0,2,5	1/1:19,0:19:0.94:2,1,0	./.	0/1:38,0:33:0:0,0,0	0/0:16,0:15:0.35:0,0,0	0/1:16,0:13:40.16:40,0,100	0/1:8,0:6:21.73:49,0,22	0/1:7,0:6:29.97:30,0,42
chr10	43685570	.	CGTGTGT	C	1232.69	PASS	AB=0.907;AC=16;AF=0.286;AN=56;BaseQRankSum=5.231;DP=559;FS=1.336;HRun=0;HaplotypeScore=129.6666;InbreedingCoeff=0.1465;MQ=41.70;MQ0=33;MQRankSum=-4.619;QD=6.07;ReadPosRankSum=1.116;VQSLOD=2.6379;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:27:14.27:14,0,51	0/0:4,0:3:2.98:0,3,21	0/0:18,0:5:10.58:0,11,151	0/0:22,0:6:14.78:0,15,212	0/0:12,0:12:2.99:0,3,23	0/0:28,0:27:60.62:0,61,1677	0/0:36,0:31:81.19:0,81,2084	0/0:8,0:6:10.19:0,10,107	0/0:25,0:24:57.13:0,57,1262	0/1:24,5:24:88.25:386,0,88	0/0:4,1:5:1.97:0,2,6	0/0:18,0:17:6.68:0,7,92	1/1:17,0:16:20.12:284,20,0	0/0:19,0:17:5.79:0,6,50	1/1:6,4:9:2.97:56,3,0	0/1:7,7:12:3.05:63,0,3	0/1:15,0:13:0.67:1,0,79	0/1:18,1:19:60.78:83,0,61	0/1:13,0:8:5.59:80,0,6	0/0:7,3:9:1.65:0,2,6	0/0:69,1:62:3.97:0,4,18	0/0:18,0:18:5.60:0,6,54	0/0:14,0:14:8.97:0,9,72	0/0:45,0:40:13.01:0,13,136	1/1:15,7:20:0.98:45,1,0	0/1:16,1:16:39.01:209,0,39	1/1:5,2:6:6.01:86,6,0	0/1:8,0:5:14.94:77,0,15
chr10	43685574	.	T	TGCGC	37.42	PASS	AB=0.976;AC=14;AF=0.250;AN=56;BaseQRankSum=5.890;DP=562;FS=7.511;HRun=0;HaplotypeScore=132.9745;InbreedingCoeff=0.2436;MQ=41.93;MQ0=31;MQRankSum=-5.812;QD=0.18;ReadPosRankSum=-0.656;VQSLOD=2.1181;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:24,7:27:4.80:13,5,0	0/0:5,0:4:4.69:0,5,20	0/0:22,0:6:15.04:0,15,239	0/0:23,0:6:14.42:0,14,248	0/0:11,0:11:3.48:0,3,46	0/0:26,0:25:59.50:0,59,1161	0/0:36,0:31:90.28:0,90,1647	0/0:14,0:11:11.01:0,11,176	0/0:27,0:26:57.19:0,57,1086	0/0:26,0:23:7.47:0,7,257	0/1:4,0:4:0:0,0,0	0/0:18,0:17:14.62:0,15,210	0/1:17,0:16:37.70:38,0,189	0/0:19,0:17:9.01:0,9,86	0/1:9,0:8:0.28:15,0,0	0/0:13,0:11:2.71:0,3,21	0/1:14,0:15:13.39:13,0,37	0/0:20,0:20:10.44:0,10,93	0/1:15,0:12:34.90:35,0,64	0/1:10,0:10:0:0,0,0	1/1:71,0:64:1.41:3,1,0	0/0:14,0:14:8.34:0,8,97	0/0:14,0:14:15.03:0,15,155	0/0:43,0:38:24.05:0,24,260	1/1:20,0:18:2.48:6,2,0	0/0:19,0:18:3.56:0,4,141	0/1:7,0:6:0.78:34,0,1	0/1:7,0:5:7.36:7,0,43
chr10	43685578	.	T	TGCGC	1882.02	PASS	AB=0.751;AC=22;AF=0.393;AN=56;BaseQRankSum=2.244;DP=595;FS=5.763;HRun=0;HaplotypeScore=132.1538;InbreedingCoeff=0.2940;MQ=44.01;MQ0=29;MQRankSum=-2.220;QD=5.76;ReadPosRankSum=-1.808;VQSLOD=1.4073;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:31,0:28:4.33:13,4,0	0/0:6,0:5:8.52:0,9,91	0/0:27,0:7:18.02:0,18,287	0/0:27,0:10:26.70:0,27,416	0/0:9,0:9:0.47:0,0,1	0/0:26,0:25:60.20:0,60,1167	0/0:40,0:35:93.24:0,93,1650	0/0:16,0:13:27.50:0,28,334	0/0:27,0:26:66.23:0,66,1243	0/1:19,7:24:99:559,0,163	0/1:1,3:5:0:0,0,0	0/0:19,0:18:6.59:0,7,91	0/1:20,0:19:61.23:61,0,95	0/0:19,0:17:5.99:0,6,54	1/1:8,0:7:6.01:98,6,0	1/1:11,2:11:3.01:50,3,0	0/0:20,0:19:32.05:0,32,258	0/1:5,12:20:17.40:218,0,17	1/1:9,2:15:12.49:222,12,0	0/1:7,3:10:0:0,0,0	1/1:25,39:65:1.41:3,1,0	0/0:18,0:18:2.39:0,2,48	0/0:14,0:14:8.97:0,9,70	0/1:45,0:40:3.96:4,0,133	1/1:12,7:18:4.24:86,4,0	0/1:11,8:21:46.45:442,0,46	1/1:3,4:7:6.02:135,6,0	0/1:4,3:5:38.27:149,0,38
chr10	43685582	.	TGC	T	547.27	PASS	AB=0.993;AC=9;AF=0.167;AN=54;BaseQRankSum=3.153;DP=597;FS=17.178;HRun=0;HaplotypeScore=120.8615;InbreedingCoeff=0.2758;MQ=46.37;MQ0=27;MQRankSum=-3.717;QD=4.60;ReadPosRankSum=-1.667;VQSLOD=1.6377;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:26:7.52:0,8,30	1/1:4,2:5:8.99:77,9,0	0/0:33,0:12:8.52:0,9,269	0/0:31,0:13:19.17:0,19,314	./.	0/0:26,0:25:41.76:0,42,991	0/0:37,0:33:89.62:0,90,1408	0/1:18,0:15:9.14:145,0,9	0/0:28,0:27:62.15:0,62,921	0/1:27,1:26:49.59:50,0,258	0/0:5,0:5:2.04:0,2,6	0/0:18,0:17:17.71:0,18,245	0/0:19,0:18:31.28:0,31,271	0/0:18,0:17:14.67:0,15,209	0/0:7,0:6:8.59:0,9,59	0/0:12,0:11:4.96:0,5,14	1/1:16,6:21:20.21:343,20,0	0/0:21,0:21:1.96:0,2,118	0/1:15,0:14:1.49:1,0,141	0/0:9,0:8:1.77:0,2,6	0/0:78,0:71:20.03:0,20,113	0/0:19,0:19:20.30:0,20,254	0/0:12,0:12:15.05:0,15,258	0/0:40,3:39:33.06:0,33,490	0/0:20,0:18:6.85:0,7,36	0/1:22,0:21:61.72:62,0,263	0/1:8,0:7:3.36:3,0,8	0/0:6,0:4:5.92:0,6,43
chr10	43686000	.	CT	C	11174.32	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=14.833;DP=767;FS=1.868;HRun=2;HaplotypeScore=75.9813;InbreedingCoeff=1.0000;MQ=86.46;MQ0=0;MQRankSum=-0.156;QD=35.93;ReadPosRankSum=2.330;VQSLOD=5.5579;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,144,2112	0/0:14,0:14:42.14:0,42,626	0/0:26,0:26:67.77:0,68,965	0/0:24,0:24:69.15:0,69,952	0/0:29,0:29:84.28:0,84,1243	0/0:29,0:29:84.27:0,84,1238	0/0:30,0:30:90.28:0,90,1294	0/0:33,0:32:96.31:0,96,1404	0/0:26,0:26:75.22:0,75,1082	1/1:2,39:41:99:1519,117,0	1/1:0,24:24:69.15:859,69,0	0/0:30,0:30:87.28:0,87,1284	0/0:26,0:26:78.26:0,78,1169	0/0:26,0:26:78.26:0,78,1151	1/1:0,31:31:90.29:1168,90,0	1/1:0,22:22:66.21:857,66,0	0/0:31,0:31:93.30:0,93,1375	1/1:1,19:20:51.17:662,51,0	1/1:1,26:27:78.18:950,78,0	1/1:0,16:16:48.11:603,48,0	1/1:2,43:45:99:1556,120,0	0/0:23,0:23:69.22:0,69,1013	0/0:26,0:26:72.23:0,72,1059	0/0:33,0:33:99:0,99,1461	1/1:1,18:19:45.10:565,45,0	1/1:0,29:29:87.27:1111,87,0	1/1:0,22:22:66.21:857,66,0	1/1:0,15:15:36.12:467,36,0
chr10	43686336	.	CGTGTGTGT	C	589.42	PASS	AB=0.958;AC=15;AF=0.326;AN=46;BaseQRankSum=1.504;DP=631;FS=7.493;HRun=0;HaplotypeScore=160.3929;InbreedingCoeff=0.5040;MQ=67.83;MQ0=12;MQRankSum=-2.750;QD=3.35;ReadPosRankSum=-0.284;VQSLOD=2.2208;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:29:9.03:0,9,249	0/0:11,0:10:6.49:0,6,191	./.	./.	./.	0/0:22,0:22:18.06:0,18,477	0/0:20,0:20:33.11:0,33,1080	./.	0/0:24,0:25:15.52:0,16,419	1/1:16,4:20:11.98:169,12,0	./.	0/0:19,0:25:17.94:0,18,143	0/0:21,0:22:25.10:0,25,177	0/1:18,0:18:36.93:45,0,37	0/0:26,0:26:30.10:0,30,1067	0/0:13,0:21:7.27:0,7,181	0/0:35,0:35:22.94:0,23,691	1/1:16,2:18:8.82:168,9,0	0/0:27,0:27:2.70:0,3,6	1/1:7,4:11:2.81:39,3,0	0/1:47,0:46:7.05:34,0,7	0/0:9,0:17:2.99:0,3,25	0/0:9,0:12:14.96:0,15,156	0/0:25,0:28:8.01:0,8,193	1/1:14,6:19:0.47:1,0,0	1/1:21,1:23:8.88:155,9,0	0/1:12,2:14:1.81:69,0,2	1/1:3,0:5:3.01:56,3,0
chr10	43687605	.	A	ACC	385.97	PASS	AB=0.968;AC=12;AF=0.214;AN=56;BaseQRankSum=6.606;DP=412;FS=8.916;HRun=0;HaplotypeScore=81.0318;InbreedingCoeff=-0.1463;MQ=49.40;MQ0=35;MQRankSum=-0.160;QD=2.49;ReadPosRankSum=-0.850;VQSLOD=0.9323;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:42:88.17:0,88,1006	0/0:14,0:11:21.02:0,21,228	0/0:24,0:2:3.01:0,3,34	0/1:21,0:10:10.45:10,0,103	0/0:18,0:18:45.07:0,45,568	0/0:18,0:18:45.14:0,45,640	0/0:11,0:11:27.07:0,27,386	0/0:25,0:23:66.13:0,66,772	0/0:8,0:7:21.07:0,21,330	0/1:13,0:10:64.18:64,0,87	0/1:9,0:7:32.18:32,0,81	0/0:11,0:8:18.03:0,18,215	0/0:11,0:10:30.08:0,30,353	0/0:9,0:9:24.07:0,24,307	0/1:15,0:14:34.77:35,0,239	0/1:10,0:10:20.74:21,0,178	0/0:18,0:17:23.82:0,24,253	0/1:17,2:15:99:101,0,229	0/0:11,0:11:22.52:0,23,213	0/1:12,0:12:22.33:22,0,260	0/1:12,0:12:75:75,0,172	0/0:7,0:7:18.06:0,18,235	0/0:7,0:6:12.92:0,13,145	0/0:11,0:10:15.89:0,16,192	0/0:7,1:10:0.55:0,1,187	0/1:13,0:13:9.20:9,0,191	0/1:18,3:21:99:129,0,401	1/1:8,0:1:3.01:33,3,0
chr10	43687615	.	GAAAA	G	3166.37	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=3.285;DP=412;FS=10.766;HRun=19;HaplotypeScore=84.2437;InbreedingCoeff=0.9595;MQ=55.29;MQ0=21;MQRankSum=-1.601;QD=21.54;ReadPosRankSum=1.268;VQSLOD=1.1629;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:42:83.41:0,83,1229	0/0:13,0:11:16.35:0,16,154	0/0:27,0:4:8.51:0,9,49	0/0:23,0:11:14.64:0,15,280	0/0:16,0:16:31.12:0,31,403	0/0:16,0:16:42.07:0,42,789	0/0:12,0:12:32.93:0,33,539	0/0:28,0:26:52.66:0,53,671	0/0:10,0:9:27.06:0,27,547	1/1:15,2:14:29.60:436,30,0	1/1:7,2:7:14.33:162,14,0	0/0:11,0:9:21.91:0,22,320	0/0:12,0:11:33.03:0,33,516	0/0:10,0:10:26.91:0,27,404	1/1:14,0:14:17.91:178,18,0	1/1:6,4:10:23.95:315,24,0	0/0:21,0:20:21.12:0,21,226	1/1:17,2:16:16.52:215,17,0	1/1:1,13:14:36.10:492,36,0	1/1:2,5:7:9.03:108,9,0	1/1:10,2:12:20.02:247,20,0	0/0:5,0:5:14.94:0,15,214	0/0:8,0:8:18.39:0,18,188	0/0:10,0:9:15.94:0,16,257	1/1:9,1:10:18.85:224,19,0	1/1:3,9:12:18.43:389,18,0	1/1:12,6:18:34.81:450,35,0	1/1:4,1:4:12.04:176,12,0
chr10	43687620	.	AAAAG	A	1309.67	PASS	AB=0.963;AC=19;AF=0.339;AN=56;BaseQRankSum=6.794;DP=405;FS=19.134;HRun=0;HaplotypeScore=88.9022;InbreedingCoeff=0.5514;MQ=58.28;MQ0=17;MQRankSum=-3.603;QD=10.39;ReadPosRankSum=1.935;VQSLOD=1.5323;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:44:74.38:0,74,1431	0/0:14,0:12:23.91:0,24,300	0/0:28,0:5:14.78:0,15,143	0/0:23,0:11:21.87:0,22,336	0/0:18,0:18:22.50:0,22,457	0/0:15,0:15:39.12:0,39,873	0/0:14,0:14:29.80:0,30,564	0/0:30,0:28:51.91:0,52,1106	0/0:10,0:9:24.08:0,24,515	1/1:15,0:13:25.44:172,25,0	0/1:8,1:8:3.61:88,0,4	0/0:13,0:11:24.53:0,25,389	0/0:13,0:12:30:0,30,599	0/0:12,0:12:29.70:0,30,453	1/1:7,0:7:6.34:55,6,0	1/1:8,1:9:13.85:178,14,0	0/0:22,0:21:28.76:0,29,383	0/1:10,1:10:8.07:116,0,8	0/1:16,0:16:55.01:185,0,55	1/1:5,0:5:8.77:55,9,0	0/1:11,0:11:45.11:80,0,45	0/0:5,0:5:9.01:0,9,221	0/0:8,0:8:8.77:0,9,185	0/0:9,0:9:12.46:0,12,281	1/1:9,0:9:3.37:77,3,0	1/1:10,1:11:26.84:218,27,0	0/1:16,0:16:35.64:194,0,36	1/1:7,0:6:11.30:83,11,0
chr10	43687824	.	GGAGGGTTCAGTGGTTAA	G	1820.39	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.902;DP=411;FS=2.407;HRun=0;HaplotypeScore=178.9316;InbreedingCoeff=0.9465;MQ=66.83;MQ0=1;MQRankSum=-5.600;QD=82.74;ReadPosRankSum=3.856;VQSLOD=3.4363;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:66.23:0,66,5271	1/1:1,5:5:12.04:596,12,0	0/0:18,0:13:29.84:0,30,1665	0/0:23,0:20:45.12:0,45,2234	0/0:7,0:7:21.07:0,21,1545	0/0:20,0:20:60.21:0,60,4341	0/0:23,0:23:63.22:0,63,4893	0/0:18,0:18:39.13:0,39,2724	0/0:11,0:11:30.10:0,30,2359	0/0:9,0:9:27.09:0,27,1631	0/0:8,0:8:21.07:0,21,1459	0/0:16,0:15:45.15:0,45,3478	0/0:13,0:13:39.13:0,39,2867	0/0:12,0:12:30.10:0,30,2252	0/0:16,0:16:45.15:0,45,3482	0/0:16,0:16:48.16:0,48,3716	1/1:2,14:16:27.09:1341,27,0	0/0:12,0:11:36.12:0,36,2823	0/0:22,0:22:66.20:0,66,4320	0/0:10,0:10:30.10:0,30,2042	0/0:28,0:28:81.28:0,81,6405	0/0:4,0:4:9.03:0,9,753	0/0:8,0:8:24.08:0,24,1819	0/0:14,0:14:36.10:0,36,2608	0/0:12,0:12:33.11:0,33,2243	0/0:21,0:21:63.21:0,63,4569	0/0:16,0:15:38.51:0,39,2403	0/0:10,0:10:24.08:0,24,1852
chr10	43687948	.	T	TC	4465.71	PASS	AB=0.619;AC=29;AF=0.518;AN=56;BaseQRankSum=-6.539;DP=382;FS=0.438;HRun=8;HaplotypeScore=48.9469;InbreedingCoeff=0.8590;MQ=70.37;MQ0=0;MQRankSum=-2.032;QD=21.78;ReadPosRankSum=-0.068;VQSLOD=4.6080;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:51.02:0,51,467	1/1:2,4:6:5.97:69,6,0	0/0:17,0:16:14.27:0,14,169	0/0:12,0:13:19.52:0,20,148	0/0:9,0:9:24.01:0,24,220	0/0:24,0:24:57.01:0,57,513	0/0:24,0:24:69.03:0,69,631	1/1:5,6:11:15.03:163,15,0	0/0:8,0:8:23.99:0,24,214	1/1:5,10:15:24.06:267,24,0	1/1:3,4:7:8.61:103,9,0	0/0:12,0:12:26.99:0,27,241	0/0:4,0:4:9:0,9,82	0/0:14,0:14:42.02:0,42,383	1/1:7,0:7:12.32:79,12,0	0/1:5,0:13:18.41:20,0,18	1/1:1,29:31:87.09:983,87,0	1/1:1,18:19:54.16:623,54,0	1/1:3,12:15:33.08:369,33,0	1/1:1,5:6:12.04:138,12,0	1/1:4,25:29:54.16:623,54,0	0/0:8,0:8:18.01:0,18,164	0/0:4,0:4:9:0,9,82	0/0:18,0:18:41.99:0,42,378	1/1:2,5:7:6.02:69,6,0	1/1:4,16:20:17.67:448,18,0	1/1:2,9:11:24.06:268,24,0	1/1:0,8:8:21.06:242,21,0
chr10	43688118	.	C	CT	5859.09	PASS	AB=1.000;AC=45;AF=0.804;AN=56;BaseQRankSum=1.408;DP=323;FS=1.415;HRun=8;HaplotypeScore=65.4149;InbreedingCoeff=0.7788;MQ=58.50;MQ0=5;MQRankSum=-1.613;QD=22.45;ReadPosRankSum=1.283;VQSLOD=5.3269;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,17:18:36.09:406,36,0	1/1:0,5:5:6.02:69,6,0	0/1:16,0:7:1.81:2,0,40	0/0:11,0:3:3.48:0,3,45	0/0:7,0:7:21.01:0,21,192	0/0:20,0:20:38.99:0,39,351	0/0:19,0:14:36.02:0,36,329	1/1:5,17:22:54.40:578,54,0	0/0:5,0:5:5.99:0,6,55	1/1:1,10:11:30.09:343,30,0	1/1:2,7:9:21.02:225,21,0	1/1:5,6:11:18.05:208,18,0	1/1:1,4:4:6.02:69,6,0	1/1:2,5:7:15.04:173,15,0	1/1:3,9:12:24.07:275,24,0	1/1:2,6:8:15.01:159,15,0	1/1:5,13:18:20.68:490,21,0	1/1:1,14:15:38.95:429,39,0	1/1:6,9:14:30.09:343,30,0	1/1:1,6:7:15.04:173,15,0	1/1:2,6:8:18.05:208,18,0	1/1:0,1:1:3.01:35,3,0	1/1:1,11:11:23.71:276,24,0	1/1:1,9:9:21.06:242,21,0	1/1:1,7:8:21.06:242,21,0	1/1:3,14:17:20.63:463,21,0	1/1:3,9:12:24.07:277,24,0	1/1:3,7:9:15.04:173,15,0
chr10	43688362	.	CCAAAAAAA	C	2025.43	PASS	AB=1.000;AC=16;AF=0.296;AN=54;BaseQRankSum=3.214;DP=492;FS=25.759;HRun=0;HaplotypeScore=98.1661;InbreedingCoeff=0.3730;MQ=42.42;MQ0=82;MQRankSum=-7.831;QD=9.51;ReadPosRankSum=-0.939;VQSLOD=0.4512;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:36,0:26:99:403,0,146	0/0:4,0:3:9.03:0,9,396	0/0:10,0:3:7.27:0,7,260	0/0:8,0:3:9.03:0,9,335	0/0:20,0:14:42.02:0,42,1358	0/0:16,0:13:33.11:0,33,1448	0/0:29,0:26:63.22:0,63,2651	0/0:22,0:17:47.97:0,48,1394	0/0:25,0:23:54.11:0,54,1927	0/0:11,0:9:2.10:0,2,707	0/0:11,0:8:24.08:0,24,769	1/1:4,12:11:12.04:314,12,0	1/1:2,9:9:12.04:325,12,0	1/1:6,9:8:17.99:415,18,0	0/0:24,0:16:26.98:0,27,709	0/0:15,0:10:26.98:0,27,832	0/0:41,0:34:74.48:0,74,2466	0/1:31,0:27:39.71:40,0,1389	0/1:25,0:17:52.81:53,0,986	0/0:4,0:3:9.03:0,9,279	0/1:25,0:21:33.75:34,0,1453	./.	1/1:3,3:3:2.22:64,2,0	1/1:2,18:18:26.84:537,27,0	0/1:6,0:6:0.94:1,0,431	0/1:22,0:20:9.32:9,0,1504	0/0:20,0:16:5.19:0,5,1249	0/0:16,0:12:33.11:0,33,1127
chr10	43688367	.	AAAACAAAC	A	1680.70	PASS	AC=12;AF=0.222;AN=54;BaseQRankSum=6.915;DP=504;FS=23.590;HRun=0;HaplotypeScore=103.6125;InbreedingCoeff=0.9006;MQ=42.70;MQ0=77;MQRankSum=-7.274;QD=16.16;ReadPosRankSum=1.050;VQSLOD=0.4541;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,19:28:23.17:614,23,0	0/0:4,0:3:9.03:0,9,374	0/0:14,0:5:14.98:0,15,407	0/0:9,0:4:12.04:0,12,416	0/0:18,0:14:33.11:0,33,1292	0/0:18,0:15:39.13:0,39,1477	0/0:28,0:25:72.25:0,72,2778	0/0:23,0:18:39.13:0,39,1466	0/0:26,0:24:54.19:0,54,2001	0/0:12,0:10:27.09:0,27,985	0/0:12,0:9:27.09:0,27,960	1/1:16,0:11:12.04:242,12,0	1/1:11,0:9:12.04:255,12,0	1/1:14,0:8:15.05:311,15,0	0/0:15,0:16:18.06:0,18,588	0/0:9,0:13:21.07:0,21,728	0/0:39,0:33:61.07:0,61,2287	0/0:29,0:25:48.16:0,48,1834	0/0:28,0:18:39.13:0,39,1348	0/0:5,0:4:12.04:0,12,384	0/0:26,0:22:51.17:0,51,1941	./.	1/1:5,0:3:1.30:46,1,0	1/1:20,0:18:18.06:384,18,0	0/0:6,0:6:15.05:0,15,549	0/0:23,0:21:54.14:0,54,1979	0/0:19,0:16:42.14:0,42,1581	0/0:16,0:12:33.11:0,33,1352
chr10	43688569	.	A	AAAACAAAAC	10828.56	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=8.737;DP=527;FS=24.110;HRun=0;HaplotypeScore=156.1681;InbreedingCoeff=0.8261;MQ=56.34;MQ0=10;MQRankSum=-8.172;QD=28.27;ReadPosRankSum=-1.037;VQSLOD=2.3212;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:6,15:23:15.05:692,15,0	1/1:2,0:15:9.03:353,9,0	0/0:27,0:11:3.86:0,4,174	0/0:26,0:12:15.83:0,16,249	0/0:23,0:23:57.17:0,57,1461	0/0:24,0:24:66.19:0,66,1599	0/0:21,0:21:54.16:0,54,1358	1/1:31,0:30:72.03:1181,72,0	0/0:20,0:20:45.06:0,45,923	1/1:20,0:20:33.96:405,34,0	1/1:18,0:18:41.92:504,42,0	1/1:2,4:11:6.02:277,6,0	1/1:3,8:13:15.05:688,15,0	1/1:5,7:15:9.03:415,9,0	1/1:11,0:11:20.51:122,21,0	1/1:12,0:12:6.94:89,7,0	1/1:4,1:26:9.03:353,9,0	1/1:16,0:13:20.97:212,21,0	1/1:13,0:8:17.97:161,18,0	1/1:28,0:28:74.77:908,75,0	0/0:3,0:2:0:0,0,0	1/1:0,7:9:17.98:708,18,0	1/1:1,10:16:18.06:829,18,0	1/1:0,8:7:3.01:138,3,0	1/1:30,0:30:84.20:1037,84,0	1/1:34,0:34:77.89:924,78,0	1/1:18,0:16:42.07:501,42,0	1/1:10,0:10:27.06:329,27,0
chr10	43688573	.	C	CAAAA	13436.66	PASS	AB=1.000;AC=40;AF=0.714;AN=56;BaseQRankSum=8.543;DP=511;FS=18.169;HRun=6;HaplotypeScore=109.1821;InbreedingCoeff=0.3814;MQ=56.11;MQ0=12;MQRankSum=-9.938;QD=33.68;ReadPosRankSum=0.914;VQSLOD=1.5850;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:20:1.10:243,1,0	1/1:12,0:12:9.03:164,9,0	0/1:26,0:13:25.65:26,0,273	0/0:27,0:12:4.70:0,5,238	0/0:22,0:22:63.18:0,63,1024	0/0:25,0:24:66.23:0,66,1128	0/0:21,0:21:63.17:0,63,998	1/1:13,17:29:4.09:959,4,0	0/0:17,0:17:45.15:0,45,749	1/1:12,7:19:54.08:1005,54,0	1/1:7,8:15:45.02:878,45,0	0/1:10,0:10:15.75:78,0,16	0/1:12,0:12:6.93:196,0,7	1/1:12,0:12:9.03:131,9,0	1/1:1,11:13:21.07:558,21,0	1/1:1,11:13:13.49:397,13,0	0/1:25,0:22:8.98:196,0,9	1/1:11,6:14:29.93:464,30,0	1/1:12,3:9:21.05:391,21,0	1/1:10,18:28:76.08:1725,76,0	1/1:3,0:2:2.97:20,3,0	1/1:9,0:9:15.04:220,15,0	0/1:16,0:16:17.84:239,0,18	0/1:10,0:9:16.58:36,0,17	1/1:8,22:30:84.28:2043,84,0	1/1:13,19:32:93.22:1911,93,0	1/1:10,8:16:45.10:940,45,0	1/1:4,7:11:27.08:619,27,0
chr10	43688592	.	C	CA	4945.76	PASS	AB=1.000;AC=22;AF=0.393;AN=56;BaseQRankSum=5.597;DP=526;FS=9.432;HRun=8;HaplotypeScore=126.8311;InbreedingCoeff=0.8151;MQ=61.92;MQ0=12;MQRankSum=-5.726;QD=18.95;ReadPosRankSum=0.244;VQSLOD=3.4991;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:20:35.98:0,36,311	0/0:8,0:8:11.99:0,12,102	0/1:27,0:15:14.21:14,0,186	0/1:33,0:19:66.32:66,0,85	0/0:23,0:23:63.03:0,63,577	0/0:28,0:27:60.02:0,60,548	0/0:26,0:26:75.04:0,75,685	0/0:25,0:24:46.10:0,46,409	0/0:14,0:14:36.02:0,36,329	1/1:8,10:18:35.36:384,35,0	1/1:2,11:13:20.77:227,21,0	0/0:9,0:9:8.55:0,9,75	0/0:12,0:13:13.28:0,13,166	0/0:12,0:12:26.99:0,27,237	0/0:12,0:12:24.01:0,24,218	0/0:10,0:10:21:0,21,192	0/0:23,0:20:20.31:0,20,199	1/1:4,13:14:36.11:415,36,0	1/1:5,14:15:33.10:380,33,0	1/1:5,22:27:59.51:718,60,0	1/1:2,7:10:5.65:98,6,0	0/0:9,0:9:17.95:0,18,144	0/0:20,0:20:35.80:0,36,308	0/0:11,0:11:17.94:0,18,164	1/1:10,23:33:63.71:766,64,0	1/1:3,26:29:78.70:901,79,0	1/1:4,14:17:30.35:424,30,0	1/1:0,16:16:48.14:554,48,0
chr10	43688715	.	GAAA	G	6038.76	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=12.524;DP=530;FS=17.421;HRun=7;HaplotypeScore=80.2528;InbreedingCoeff=0.9973;MQ=72.81;MQ0=0;MQRankSum=-5.239;QD=35.52;ReadPosRankSum=2.648;VQSLOD=2.5187;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,159,3320	0/0:7,0:7:21.07:0,21,469	0/0:19,0:19:48.33:0,48,999	0/0:18,0:18:38.99:0,39,641	0/0:18,0:18:48.16:0,48,1023	0/0:13,0:13:39.13:0,39,871	0/0:21,0:21:57.18:0,57,1161	0/0:30,0:30:84.27:0,84,1781	0/0:19,0:19:57.18:0,57,1232	1/1:0,15:15:39.13:598,39,0	1/1:1,19:20:48.07:686,48,0	0/0:14,0:14:39.13:0,39,872	0/0:18,0:18:54.18:0,54,1166	0/0:12,0:12:33.11:0,33,737	0/0:18,0:18:54.19:0,54,1199	0/0:15,0:15:45.15:0,45,1005	0/0:24,0:23:66.23:0,66,1426	1/1:0,16:17:39.13:596,39,0	1/1:2,14:15:39.11:553,39,0	1/1:0,10:10:27.09:414,27,0	1/1:3,28:31:60.19:952,60,0	0/0:13,0:13:36.11:0,36,764	0/0:15,0:15:42.10:0,42,882	0/0:31,0:31:90.29:0,90,1932	1/1:0,9:9:18.06:276,18,0	1/1:0,22:22:66.22:1007,66,0	1/1:1,17:17:42.14:635,42,0	1/1:1,11:12:21.07:322,21,0
chr10	43689932	.	A	AGGAAGG	10834.43	PASS	AB=0.688;AC=25;AF=0.446;AN=56;BaseQRankSum=-4.044;DP=457;FS=66.812;HRun=0;HaplotypeScore=130.4867;InbreedingCoeff=-0.2154;MQ=52.50;MQ0=4;MQRankSum=-5.065;QD=30.61;ReadPosRankSum=5.863;VQSLOD=1.8528;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:19,0:34:99:892,0,272	0/1:2,0:7:14.57:155,0,15	0/0:21,0:9:16.94:0,17,212	0/0:19,0:11:23.51:0,24,362	0/1:11,0:17:99:318,0,129	0/0:22,0:22:60.20:0,60,1244	0/0:22,0:22:56.14:0,56,1109	1/1:6,11:19:24.60:1017,25,0	0/0:12,0:12:30.03:0,30,699	0/1:4,7:11:34.42:580,0,34	0/1:3,6:10:24:569,0,24	0/1:5,8:15:17.90:543,0,18	0/1:10,1:12:99:245,0,136	0/1:7,0:20:32.23:280,0,32	0/0:4,0:4:12.04:0,12,270	0/0:3,0:3:9:0,9,162	1/1:9,1:23:29.96:803,30,0	0/1:6,2:9:81.85:246,0,82	0/1:18,2:24:99:390,0,213	1/1:6,8:15:13.61:899,14,0	0/1:8,2:10:46.14:211,0,46	0/1:5,0:21:4.80:494,0,5	0/1:2,0:11:11.52:231,0,12	1/1:11,1:20:13.90:463,14,0	0/1:6,9:15:59.08:881,0,59	0/1:19,4:23:99:689,0,239	0/1:13,8:21:68.70:721,0,69	0/1:5,0:5:14.99:207,0,15
chr10	43690234	.	A	ACC	66.57	PASS	AB=0.857;AC=6;AF=0.143;AN=42;BaseQRankSum=1.797;DP=210;FS=8.598;HRun=0;HaplotypeScore=53.7788;InbreedingCoeff=0.4337;MQ=65.36;MQ0=9;MQRankSum=-2.965;QD=6.05;ReadPosRankSum=-0.435;VQSLOD=1.4407;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:71.27:0,71,1102	0/0:4,0:3:9.02:0,9,111	0/0:21,0:4:9.84:0,10,69	0/0:9,0:5:13.43:0,13,94	0/0:11,0:11:17.99:0,18,246	0/0:7,0:7:21.07:0,21,307	0/0:8,0:8:21.01:0,21,266	0/0:33,0:32:90.62:0,91,1239	0/0:6,0:6:15.05:0,15,215	1/1:0,1:1:3.01:48,3,0	./.	0/0:3,0:3:8.87:0,9,83	0/0:7,0:7:8.99:0,9,75	0/0:6,0:6:5.99:0,6,50	0/0:7,0:7:9.03:0,9,105	0/0:14,0:14:14.83:0,15,192	0/0:29,0:29:59.89:0,60,535	0/1:3,2:3:21.01:37,0,21	1/1:1,2:2:6.02:83,6,0	./.	./.	0/0:2,0:2:2.84:0,3,14	0/1:2,0:2:0.14:0,0,0	0/0:3,0:3:5.99:0,6,50	./.	./.	./.	./.
chr10	43690235	.	AAAAAAT	A	165.96	PASS	AB=1.000;AC=8;AF=0.200;AN=40;BaseQRankSum=3.183;DP=206;FS=0.000;HRun=0;HaplotypeScore=65.3645;InbreedingCoeff=0.4150;MQ=65.77;MQ0=9;MQRankSum=-2.575;QD=3.19;ReadPosRankSum=0.697;VQSLOD=1.2632;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:66.23:0,66,1358	0/0:4,0:3:5.44:0,5,32	0/1:21,0:4:0.80:1,0,17	0/0:9,0:5:4.15:0,4,31	0/0:11,0:11:13.47:0,13,320	0/0:8,0:8:24.05:0,24,423	0/0:8,0:8:20.97:0,21,424	0/0:32,0:31:86.19:0,86,1324	0/0:6,0:6:14.36:0,14,116	0/0:1,0:1:2.88:0,3,15	./.	0/1:2,0:2:10.56:17,0,11	0/0:6,0:6:6.99:0,7,28	0/1:6,0:6:0.44:1,0,0	1/1:2,5:7:5.34:115,5,0	1/1:14,0:14:14.75:139,15,0	0/0:28,0:28:37.20:0,37,142	0/0:4,0:3:5.27:0,5,24	0/0:3,0:2:5.75:0,6,44	./.	./.	./.	0/1:1,0:2:0:0,0,0	0/0:3,0:3:2.49:0,2,6	./.	./.	./.	./.
chr10	43690236	.	AAAAAT	A	331.67	PASS	AB=1.000;AC=13;AF=0.325;AN=40;BaseQRankSum=5.582;DP=210;FS=9.581;HRun=0;HaplotypeScore=61.7644;InbreedingCoeff=0.3188;MQ=65.66;MQ0=9;MQRankSum=-0.774;QD=3.61;ReadPosRankSum=5.046;VQSLOD=0.0096;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:67.91:0,68,1163	0/1:4,0:3:0.96:1,0,11	0/1:21,0:4:0.84:1,0,5	0/0:9,0:5:5.04:0,5,26	0/0:11,0:11:0.46:0,0,249	0/0:9,0:9:26.24:0,26,359	0/0:9,0:9:23.96:0,24,378	0/0:33,0:32:88:0,88,1155	0/0:6,0:6:11.02:0,11,79	0/0:1,0:1:2.50:0,2,9	./.	0/1:3,0:3:8.97:9,0,22	0/1:6,0:6:8.12:12,0,8	1/1:6,0:6:5.10:22,5,0	1/1:7,0:7:8.96:96,9,0	1/1:0,14:14:14.71:256,15,0	0/1:28,0:28:24.84:48,0,25	0/0:5,0:3:4.41:0,4,16	0/0:3,0:2:5.31:0,5,26	./.	./.	./.	0/0:2,0:2:0.47:0,0,1	1/1:3,0:3:4.74:15,5,0	./.	./.	./.	./.
chr10	43690386	.	TAAG	T	1709.05	PASS	AC=12;AF=0.333;AN=36;BaseQRankSum=5.896;DP=243;FS=0.667;HRun=0;HaplotypeScore=60.7776;InbreedingCoeff=0.9072;MQ=92.01;MQ0=2;MQRankSum=-2.928;QD=39.75;ReadPosRankSum=3.761;VQSLOD=4.5663;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,108,2435	0/0:1,0:1:3.01:0,3,69	0/0:15,0:15:39.11:0,39,824	0/0:21,0:16:48.14:0,48,1049	0/0:6,0:6:18.06:0,18,394	0/0:17,0:17:45.15:0,45,1038	0/0:17,0:17:51.18:0,51,1168	0/0:32,0:32:96.32:0,96,2174	0/0:8,0:8:21.07:0,21,484	./.	./.	1/1:0,6:6:15.05:256,15,0	1/1:0,5:5:15.05:256,15,0	1/1:0,7:7:21.07:358,21,0	0/0:10,0:10:24.08:0,24,520	0/0:12,0:11:33.11:0,33,758	0/0:24,0:24:63.22:0,63,1448	./.	./.	./.	./.	1/1:0,2:2:6.02:102,6,0	1/1:1,3:4:8.99:122,9,0	1/1:0,19:19:45.63:768,46,0	./.	./.	./.	./.
chr10	43690465	.	AGACCC	A	364.11	PASS	AB=0.972;AC=10;AF=0.217;AN=46;BaseQRankSum=1.679;DP=190;FS=35.982;HRun=0;HaplotypeScore=54.7383;InbreedingCoeff=0.0609;MQ=47.07;MQ0=4;MQRankSum=-2.753;QD=6.28;ReadPosRankSum=-1.527;VQSLOD=0.1880;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,1:29:3.61:0,4,905	1/1:1,3:3:6.02:93,6,0	0/0:4,0:2:2.93:0,3,44	0/0:5,0:3:2.88:0,3,37	0/0:4,0:4:3.32:0,3,56	0/0:10,0:10:28.30:0,28,369	0/0:16,0:16:41.77:0,42,645	0/0:21,0:21:25.72:0,26,682	0/0:7,0:8:9.05:0,9,133	./.	./.	0/1:9,0:9:35.57:36,0,226	0/0:5,0:5:6.49:0,6,66	0/1:11,0:11:85.59:86,0,185	0/1:8,0:6:37.46:37,0,177	0/1:10,0:9:99:171,0,177	0/1:8,2:9:45.40:45,0,209	0/0:6,0:5:5.81:0,6,75	0/0:4,0:2:6.02:0,6,86	./.	0/1:3,0:1:0:0,0,0	1/1:3,0:3:2.94:18,3,0	0/0:3,0:2:5.75:0,6,50	0/0:12,0:12:8.53:0,9,200	0/0:2,0:2:6.01:0,6,76	./.	./.	0/0:1,0:1:0:0,0,0
chr10	43690618	.	A	ATAAT	158.25	PASS	AB=1.000;AC=9;AF=0.188;AN=48;BaseQRankSum=2.095;DP=151;FS=4.629;HRun=0;HaplotypeScore=27.1267;InbreedingCoeff=0.4690;MQ=41.35;MQ0=7;MQRankSum=-2.290;QD=7.54;ReadPosRankSum=-0.564;VQSLOD=1.1025;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:11:30.08:0,30,462	./.	0/0:9,0:2:5.92:0,6,39	0/0:12,0:4:12:0,12,154	0/0:5,0:5:15.03:0,15,240	0/0:14,0:14:39.10:0,39,631	0/0:6,0:6:14.97:0,15,185	0/0:26,0:20:60.16:0,60,983	0/0:3,0:3:9.03:0,9,153	1/1:2,2:4:8.48:165,8,0	1/1:4,0:3:3.41:19,3,0	0/0:2,0:2:3.01:0,3,38	./.	./.	0/0:2,0:2:6.02:0,6,76	0/0:2,0:2:5.90:0,6,37	0/0:11,0:11:23.96:0,24,358	./.	0/0:4,0:2:3.01:0,3,41	0/1:5,0:5:1.53:11,0,2	0/0:2,0:2:0.89:0,1,2	0/0:2,0:2:6.02:0,6,104	0/0:4,0:4:6.02:0,6,115	0/0:2,0:2:3.01:0,3,41	0/0:2,0:2:0.89:0,1,2	1/1:5,1:6:1.43:67,1,0	1/1:2,0:2:2.84:14,3,0	0/0:4,0:4:1.36:0,1,3
chr10	43690619	.	GAATA	G	411.94	PASS	AC=6;AF=0.250;AN=24;BaseQRankSum=0.783;DP=156;FS=1.423;HRun=0;HaplotypeScore=27.0022;InbreedingCoeff=0.5606;MQ=41.10;MQ0=8;MQRankSum=1.470;QD=14.71;ReadPosRankSum=0.439;VQSLOD=2.4132;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,4:11:9.03:141,9,0	./.	./.	./.	1/1:3,2:5:6.02:94,6,0	0/0:15,0:15:24.08:0,24,542	./.	0/0:27,0:20:9.03:0,9,192	./.	0/0:5,0:5:9.03:0,9,161	./.	./.	./.	./.	./.	./.	1/1:3,8:11:18.06:282,18,0	0/0:7,0:5:5.98:0,6,74	0/0:4,0:2:3.01:0,3,68	./.	./.	./.	0/0:4,0:4:3.01:0,3,71	./.	./.	0/0:6,0:6:6.02:0,6,103	0/0:3,0:3:3.01:0,3,58	0/0:5,0:5:3.01:0,3,55
chr10	43690665	.	T	TA	1019.74	PASS	AB=0.875;AC=18;AF=0.333;AN=54;BaseQRankSum=-0.340;DP=170;FS=3.295;HRun=9;HaplotypeScore=27.1169;InbreedingCoeff=0.6246;MQ=53.55;MQ0=5;MQRankSum=-0.783;QD=15.00;ReadPosRankSum=0.806;VQSLOD=2.6217;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:10:20.99:0,21,182	0/0:3,0:3:9:0,9,78	0/0:5,0:2:5.74:0,6,37	0/1:4,0:1:0:0,0,0	0/0:11,0:11:23.97:0,24,206	0/0:10,0:10:23.99:0,24,208	0/0:1,0:1:3:0,3,26	0/0:22,0:18:41.99:0,42,364	0/0:1,0:1:3:0,3,26	1/1:4,6:10:15.04:166,15,0	1/1:0,4:4:6.02:66,6,0	0/0:2,0:2:2.99:0,3,23	0/0:2,0:2:6:0,6,52	0/0:2,0:2:6:0,6,52	0/0:3,0:2:3:0,3,26	0/0:3,0:3:9:0,9,78	0/0:17,0:17:41.94:0,42,357	0/1:8,4:11:68.29:76,0,68	1/1:1,4:5:12.03:133,12,0	1/1:0,7:7:14.97:151,15,0	./.	0/0:4,0:4:9:0,9,78	0/0:3,0:3:8.95:0,9,71	0/0:2,0:2:1.32:0,1,5	1/1:1,4:5:6.02:66,6,0	1/1:1,10:11:27.03:285,27,0	1/1:1,3:4:9:88,9,0	1/1:1,5:6:15.04:166,15,0
chr10	43690679	.	G	GA	138.67	PASS	AB=0.844;AC=2;AF=0.036;AN=56;BaseQRankSum=2.380;DP=205;FS=0.000;HRun=0;HaplotypeScore=32.3732;InbreedingCoeff=0.0544;MQ=51.02;MQ0=5;MQRankSum=-1.009;QD=9.24;ReadPosRankSum=3.406;VQSLOD=3.4372;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:24.03:0,24,312	0/0:5,0:5:12.04:0,12,168	0/0:5,0:2:3.01:0,3,39	0/1:4,0:1:0:0,0,0	0/0:11,0:11:24.08:0,24,335	0/0:8,0:8:24.06:0,24,317	0/0:2,0:2:3.01:0,3,42	0/0:21,0:18:48.15:0,48,645	0/0:3,0:3:9.03:0,9,126	0/0:9,0:9:24.04:0,24,304	0/0:5,0:5:6.02:0,6,77	0/0:2,0:2:3.01:0,3,42	0/0:3,0:3:6.02:0,6,84	0/0:3,0:3:8.96:0,9,102	0/0:6,0:5:3.01:0,3,41	0/0:5,0:5:9.03:0,9,126	0/0:22,0:22:53.76:0,54,634	0/1:6,5:11:99:212,0,119	0/0:6,0:6:18.06:0,18,239	0/0:9,0:9:15.05:0,15,209	0/0:1,0:1:3.01:0,3,42	0/0:5,0:5:11.99:0,12,145	0/0:4,0:4:12.04:0,12,167	0/0:4,0:4:3.78:0,4,11	0/0:6,0:6:6.02:0,6,76	0/0:12,0:11:30.09:0,30,399	0/0:6,0:6:9.02:0,9,111	0/0:11,0:11:24.04:0,24,296
chr10	43690758	.	G	GA	1709.53	PASS	AB=0.878;AC=47;AF=0.839;AN=56;BaseQRankSum=3.257;DP=325;FS=0.000;HRun=14;HaplotypeScore=58.5750;InbreedingCoeff=0.5590;MQ=60.53;MQ0=9;MQRankSum=-1.000;QD=6.02;ReadPosRankSum=2.202;VQSLOD=2.1578;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:7,11:19:6.77:111,0,7	1/1:5,0:5:10.98:49,11,0	0/0:23,0:5:4.90:0,5,25	0/1:22,0:13:6.34:6,0,30	1/1:6,12:17:24.42:205,24,0	0/1:7,0:8:1.42:1,0,68	0/0:8,0:8:11.81:0,12,77	1/1:20,0:20:28.93:129,29,0	0/0:10,0:10:17.68:0,18,115	1/1:12,0:13:13.89:73,14,0	1/1:11,0:11:8.78:50,9,0	1/1:9,0:9:16.07:67,16,0	1/1:6,0:6:8.04:33,8,0	1/1:8,0:8:16.07:66,16,0	1/1:8,0:7:10.98:49,11,0	1/1:9,0:9:21.07:87,21,0	1/1:13,0:14:21.96:98,22,0	1/1:16,0:16:33.04:147,33,0	1/1:11,0:11:14.30:63,14,0	1/1:11,0:11:8.03:46,8,0	1/1:7,0:7:13.02:55,13,0	1/1:4,0:4:8.26:38,8,0	1/1:10,0:10:18.75:77,19,0	1/1:15,0:15:34.82:143,35,0	1/1:6,0:6:5.12:20,5,0	1/1:12,0:12:20.03:93,20,0	1/1:11,0:11:13.72:62,14,0	1/1:11,0:11:21.71:95,22,0
chr10	43690761	.	A	AAAG	6874.82	PASS	AB=1.000;AC=43;AF=0.768;AN=56;BaseQRankSum=-3.602;DP=344;FS=1.595;HRun=0;HaplotypeScore=52.3688;InbreedingCoeff=0.8151;MQ=61.22;MQ0=9;MQRankSum=-1.403;QD=26.75;ReadPosRankSum=2.535;VQSLOD=4.8805;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:32.69:0,33,270	1/1:0,5:5:12.04:236,12,0	0/0:24,0:5:3.79:0,4,18	0/1:22,0:13:7.29:7,0,177	0/0:18,0:17:33.03:0,33,218	0/0:8,0:8:20.27:0,20,267	0/0:8,0:8:20.97:0,21,263	1/1:4,18:23:48.28:760,48,0	0/0:9,0:9:27.05:0,27,373	1/1:3,9:13:27.45:419,27,0	1/1:0,11:11:15.05:270,15,0	1/1:10,0:10:17.91:138,18,0	1/1:9,0:9:8.54:69,9,0	1/1:8,0:8:17.93:139,18,0	1/1:1,7:7:12.04:235,12,0	1/1:2,8:10:24.04:457,24,0	1/1:3,11:15:23.74:471,24,0	1/1:0,17:17:39.13:744,39,0	1/1:2,11:13:29.99:418,30,0	1/1:4,6:10:21:321,21,0	1/1:0,7:7:15.05:266,15,0	1/1:4,0:4:8.35:55,8,0	1/1:10,0:10:15.66:154,16,0	1/1:16,0:16:38.85:301,39,0	1/1:0,7:8:6.02:112,6,0	1/1:1,11:12:35.89:542,36,0	1/1:2,13:15:14.24:292,14,0	1/1:0,11:11:24.08:467,24,0
chr10	43690762	.	A	AAG	4424.50	PASS	AB=1.000;AC=42;AF=0.750;AN=56;BaseQRankSum=0.432;DP=344;FS=0.000;HRun=0;HaplotypeScore=57.6284;InbreedingCoeff=0.7091;MQ=61.34;MQ0=9;MQRankSum=-2.734;QD=17.28;ReadPosRankSum=4.530;VQSLOD=4.6987;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:32.28:0,32,245	1/1:5,0:5:12.01:108,12,0	0/0:24,0:5:5.88:0,6,45	0/1:23,0:14:6.78:7,0,174	0/0:19,0:18:32.01:0,32,184	0/0:8,0:8:20.26:0,20,241	0/0:8,0:8:21.02:0,21,253	1/1:20,0:20:6.73:332,7,0	0/0:9,0:9:27.05:0,27,346	1/1:12,0:12:2.44:156,2,0	1/1:11,0:11:14.80:121,15,0	1/1:1,9:11:17.91:285,18,0	1/1:1,8:9:9.01:143,9,0	1/1:0,8:8:18.06:287,18,0	1/1:8,0:7:12.01:107,12,0	1/1:10,0:10:4.60:182,5,0	1/1:15,0:15:23.66:215,24,0	1/1:16,0:16:38.96:350,39,0	0/1:13,0:13:1.99:160,0,2	1/1:10,0:10:17.44:132,17,0	1/1:7,0:7:14.23:116,14,0	1/1:1,3:4:9.03:130,9,0	1/1:1,11:12:23.84:351,24,0	1/1:0,16:16:39.13:621,39,0	1/1:8,0:8:5.98:49,6,0	1/1:12,0:12:14.65:229,15,0	1/1:15,0:15:13.56:132,14,0	1/1:11,0:11:24:212,24,0
chr10	43692422	.	TA	T	697.03	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=-1.193;DP=296;FS=10.323;HRun=9;HaplotypeScore=41.9764;InbreedingCoeff=0.6517;MQ=67.84;MQ0=23;MQRankSum=1.979;QD=7.92;ReadPosRankSum=0.060;VQSLOD=0.1974;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:14:24.76:117,25,0	1/1:3,0:3:8.04:32,8,0	0/0:40,0:8:8.86:0,9,98	0/0:27,1:8:13.80:0,14,113	1/1:13,0:12:29.48:148,29,0	0/0:14,0:14:42.11:0,42,472	0/0:3,0:3:9.03:0,9,101	0/0:27,0:25:60.16:0,60,673	0/0:6,0:6:15.04:0,15,172	0/0:3,0:3:1.53:0,2,10	0/0:7,0:7:10.04:0,10,53	0/0:2,0:2:2.97:0,3,20	0/0:0,0:2:2.84:0,3,14	0/0:0,0:1:2.90:0,3,16	1/1:1,9:10:24.01:220,24,0	1/1:1,2:3:3:27,3,0	1/1:27,0:25:52.66:257,53,0	0/0:20,0:16:23.96:0,24,149	0/0:19,0:17:15.24:0,15,99	1/1:3,0:3:7.19:45,7,0	1/1:4,0:4:4.49:27,4,0	0/0:0,0:2:2.84:0,3,14	0/0:3,0:3:5.84:0,6,39	0/0:2,0:2:5.92:0,6,41	0/0:3,0:3:8.51:0,9,45	0/0:16,0:14:20.85:0,21,101	0/1:9,0:9:5.01:5,0,57	0/0:10,0:10:24.09:0,24,119
chr10	43692431	.	AT	A	1575.30	PASS	AB=0.963;AC=13;AF=0.232;AN=56;BaseQRankSum=-2.300;DP=308;FS=1.299;HRun=2;HaplotypeScore=44.5858;InbreedingCoeff=0.3813;MQ=71.88;MQ0=11;MQRankSum=2.553;QD=13.46;ReadPosRankSum=2.466;VQSLOD=2.8021;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,14:14:27.09:346,27,0	1/1:0,4:4:9.03:116,9,0	0/0:39,0:10:9.20:0,9,148	0/0:29,0:9:8.44:0,8,76	1/1:0,12:12:36.05:431,36,0	0/0:15,0:15:42.14:0,42,579	0/0:3,0:3:9.03:0,9,124	0/0:27,0:27:78.12:0,78,921	0/0:10,0:10:29.95:0,30,306	0/0:4,0:4:9.66:0,10,53	0/0:8,0:8:19.20:0,19,67	0/0:2,0:2:5.97:0,6,56	0/0:5,0:5:11.63:0,12,70	0/0:4,0:4:5.94:0,6,42	0/1:10,0:10:7.62:8,0,16	0/0:4,0:4:4.41:0,4,47	1/1:0,24:25:57.13:711,57,0	0/0:13,0:12:22.79:0,23,92	0/1:22,0:21:57.48:57,0,58	0/0:3,0:3:2.28:0,2,11	0/1:5,0:6:12.69:27,0,13	0/0:4,0:4:8.93:0,9,65	0/0:4,0:4:11.96:0,12,108	0/0:2,0:2:6:0,6,57	0/0:5,0:5:12.35:0,12,48	0/1:13,0:13:39.27:43,0,39	0/1:10,0:10:0.81:1,0,45	0/0:10,0:10:3.76:0,4,47
chr10	43692596	.	A	ACTCT	1173.53	PASS	AB=0.809;AC=27;AF=0.614;AN=44;BaseQRankSum=-2.654;DP=438;FS=0.000;HRun=0;HaplotypeScore=75.7207;InbreedingCoeff=0.1521;MQ=70.01;MQ0=18;MQRankSum=0.650;QD=4.97;ReadPosRankSum=-0.352;VQSLOD=1.5848;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:23:5.04:0,5,34	0/0:1,0:4:3:0,3,26	./.	0/0:48,0:21:0:0,0,0	./.	0/1:13,5:21:40.67:65,0,41	1/1:5,7:14:12.04:283,12,0	./.	0/1:9,0:20:12.74:13,0,80	1/1:12,0:12:11.21:157,11,0	./.	1/1:8,0:8:3.01:52,3,0	1/1:10,0:9:6.02:99,6,0	1/1:13,0:12:3.01:40,3,0	0/1:14,9:26:34.64:200,0,35	1/1:4,8:17:8.40:153,8,0	0/0:10,0:16:12.01:0,12,112	0/1:14,0:12:3.40:18,0,3	1/1:18,0:17:4.53:25,5,0	1/1:7,0:6:0.47:1,0,0	1/1:19,0:19:2.65:19,3,0	./.	./.	1/1:16,0:15:6.02:103,6,0	0/0:4,0:3:2.92:0,3,17	0/0:14,0:14:1.47:0,1,22	0/1:10,0:10:30.13:44,0,30	1/1:10,0:8:3.01:35,3,0
chr10	43692637	.	C	CTCTCTCT	735.55	PASS	AB=0.929;AC=14;AF=0.259;AN=54;BaseQRankSum=3.412;DP=436;FS=31.150;HRun=0;HaplotypeScore=92.9243;InbreedingCoeff=0.2857;MQ=57.30;MQ0=31;MQRankSum=-3.247;QD=5.84;ReadPosRankSum=-0.951;VQSLOD=0.1622;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:27:48.62:0,49,629	0/0:4,0:4:3.01:0,3,62	0/0:31,0:14:2.49:0,2,210	0/0:35,0:9:10.34:0,10,134	0/0:12,0:11:18.01:0,18,199	0/0:19,0:19:24.09:0,24,434	0/1:16,0:14:67.22:70,0,67	0/0:15,0:15:43.68:0,44,516	0/0:22,0:22:38.92:0,39,519	0/1:6,0:9:45.08:52,0,45	0/0:6,0:8:2.62:0,3,31	1/1:0,12:18:2.85:124,3,0	1/1:1,9:12:6.01:241,6,0	1/1:1,0:16:6:54,6,0	0/0:33,0:33:24.79:0,25,725	0/0:22,0:22:6.21:0,6,332	0/0:16,0:15:36.12:0,36,551	0/0:10,0:9:5.05:0,5,44	0/0:15,0:17:6.74:0,7,243	0/0:7,0:7:5.96:0,6,53	0/1:9,0:8:10.97:11,0,54	1/1:12,0:12:3.01:32,3,0	./.	1/1:3,5:8:6.02:246,6,0	0/0:4,0:2:2.92:0,3,17	0/0:14,0:14:17.05:0,17,196	0/1:14,0:13:54.84:55,0,231	0/0:5,0:4:2.90:0,3,16
chr10	43692840	.	GCA	G	2181.45	PASS	AB=0.917;AC=29;AF=0.518;AN=56;BaseQRankSum=-1.554;DP=987;FS=8.628;HRun=0;HaplotypeScore=257.2117;InbreedingCoeff=-0.0594;MQ=52.20;MQ0=8;MQRankSum=3.658;QD=2.73;ReadPosRankSum=3.535;VQSLOD=0.7167;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:52:3.05:0,3,23	0/1:11,0:11:0:0,0,0	0/0:34,0:27:0.57:0,1,38	0/1:36,1:23:5.60:6,0,40	0/0:26,0:26:5.96:0,6,45	0/1:21,2:24:57.78:58,0,465	0/1:33,6:39:99:121,0,837	1/1:19,13:28:17.14:183,17,0	0/1:26,3:30:80.08:80,0,489	0/1:61,0:62:13.66:14,0,402	0/1:22,0:23:0.01:0,0,0	0/1:46,6:52:5.25:75,0,5	0/1:40,4:45:46.14:65,0,46	0/1:47,9:56:9.57:21,0,10	1/1:14,35:50:37:877,37,0	1/1:3,25:30:28.07:611,28,0	0/0:30,1:31:18.87:0,19,319	0/0:21,0:17:9.13:0,9,77	0/0:20,0:20:0.17:0,0,41	1/1:34,0:40:2.02:10,2,0	0/1:84,0:83:3.62:4,0,37	1/1:29,3:32:3:25,3,0	1/1:24,2:27:3:34,3,0	1/1:29,4:34:9.03:103,9,0	0/1:23,0:26:1.03:1,0,5	0/1:36,1:37:23.25:23,0,201	0/1:12,0:12:13.12:13,0,21	0/1:4,0:5:7.25:7,0,27
chr10	43692868	.	ACG	A	1432.52	PASS	AB=0.995;AC=20;AF=0.357;AN=56;BaseQRankSum=6.769;DP=1294;FS=7.405;HRun=0;HaplotypeScore=361.4952;InbreedingCoeff=-0.4368;MQ=38.61;MQ0=24;MQRankSum=-3.637;QD=1.49;ReadPosRankSum=6.043;VQSLOD=0.4531;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:56,2:56:16.58:40,0,17	0/0:23,0:22:16.97:0,17,95	0/0:51,0:12:21.65:0,22,227	0/1:63,0:10:0.68:1,0,108	0/0:43,2:44:11.38:0,11,81	0/0:22,0:22:19.92:0,20,584	0/0:47,1:48:13.80:0,14,1203	0/0:41,0:36:29.52:0,30,562	0/0:40,0:40:16.48:0,16,893	0/1:87,0:82:99:371,0,365	0/0:29,0:29:15.31:0,15,104	0/1:65,0:65:20.74:21,0,142	0/1:63,1:64:46.65:47,0,133	0/1:68,0:68:3.50:4,0,82	0/1:56,2:58:99:379,0,274	0/1:42,0:42:99:153,0,216	0/1:34,0:34:14.78:15,0,292	0/1:26,0:21:57.86:58,0,179	0/1:31,0:24:39.83:40,0,157	0/1:58,0:58:9.31:9,0,130	0/1:110,0:106:26.94:27,0,114	1/1:38,0:38:0.26:1,0,0	0/0:33,0:33:1.88:0,2,43	0/1:35,0:35:14.84:15,0,27	0/1:38,0:37:15.44:18,0,15	0/1:54,0:52:99:288,0,279	0/1:16,0:15:26.28:71,0,26	0/1:17,0:17:27.12:27,0,85
chr10	43692883	.	CAT	C	3063.96	PASS	AB=0.942;AC=22;AF=0.393;AN=56;BaseQRankSum=10.547;DP=1454;FS=1.406;HRun=0;HaplotypeScore=422.3681;InbreedingCoeff=0.4027;MQ=37.98;MQ0=30;MQRankSum=-7.136;QD=3.86;ReadPosRankSum=0.336;VQSLOD=0.9188;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:52,4:54:23.73:0,24,326	0/0:25,2:27:23.84:0,24,379	0/0:69,0:19:48.17:0,48,721	0/0:80,0:15:38.46:0,38,609	0/1:54,0:54:0.43:0,0,218	0/0:18,0:17:45.12:0,45,799	0/0:49,0:49:99:0,126,2237	0/0:58,0:53:99:0,153,2707	0/0:41,0:41:72.63:0,73,1805	0/1:90,5:91:40:761,0,40	1/1:34,1:35:21.81:123,22,0	0/0:71,7:78:4.23:0,4,679	0/1:70,3:73:99:116,0,706	0/1:71,11:82:26.28:26,0,535	0/0:56,0:56:99:0,153,2701	0/0:41,0:41:99:0,114,1959	0/1:31,2:33:41.78:42,0,521	1/1:23,3:21:16.95:265,17,0	0/1:23,0:20:95.50:113,0,96	1/1:58,2:59:36.56:217,37,0	1/1:131,5:132:77.72:419,78,0	0/0:45,5:50:11.13:0,11,183	0/1:35,4:39:6.22:6,0,283	0/0:37,0:37:23.82:0,24,340	1/1:38,1:38:2:14,2,0	0/1:53,7:57:6.16:719,0,6	1/1:17,4:21:24.33:169,24,0	1/1:16,2:18:28.11:264,28,0
chr10	43692885	.	TAC	T	5423.91	PASS	AB=0.836;AC=20;AF=0.357;AN=56;BaseQRankSum=5.522;DP=1507;FS=1.827;HRun=0;HaplotypeScore=434.5633;InbreedingCoeff=0.3819;MQ=37.81;MQ0=31;MQRankSum=-5.597;QD=7.28;ReadPosRankSum=0.102;VQSLOD=3.5994;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:52,1:55:24:0,24,387	0/0:28,0:30:20.92:0,21,344	0/0:72,0:21:51.14:0,51,768	0/0:85,0:17:41.68:0,42,642	0/1:52,1:57:20.28:20,0,212	0/0:17,0:16:42.14:0,42,708	0/0:48,0:48:99:0,117,1963	0/0:57,0:53:99:0,144,2421	0/0:39,0:39:88.05:0,88,1619	0/1:69,26:99:99:1125,0,454	1/1:23,11:35:20.18:272,20,0	0/0:78,0:81:12.24:0,12,454	0/1:73,0:76:1.61:2,0,555	0/0:76,0:83:10.11:0,10,392	0/0:56,0:56:99:0,144,2409	0/0:42,0:42:99:0,108,1786	0/1:27,1:31:6.85:7,0,484	1/1:14,10:23:9.14:475,9,0	0/1:9,13:20:53.46:320,0,53	1/1:35,23:60:38.76:505,39,0	1/1:70,59:134:70.64:967,71,0	0/0:48,3:59:11.13:0,11,131	0/1:37,4:44:14.96:15,0,213	0/0:34,0:36:24.06:0,24,265	1/1:17,19:38:4.22:44,4,0	0/1:37,24:65:84.96:1126,0,85	1/1:6,13:21:9.01:211,9,0	0/1:10,8:19:4.05:335,0,4
chr10	43692977	.	CACACACAT	C	6372.55	PASS	AB=0.930;AC=19;AF=0.339;AN=56;BaseQRankSum=9.212;DP=1624;FS=1.002;HRun=0;HaplotypeScore=652.5121;InbreedingCoeff=-0.4054;MQ=41.40;MQ0=19;MQRankSum=-8.372;QD=5.37;ReadPosRankSum=4.065;VQSLOD=0.1266;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:52,2:52:99:111,0,199	0/1:21,3:24:38.65:365,0,39	0/0:30,0:11:29.94:0,30,404	0/0:33,0:10:24.08:0,24,348	0/1:50,8:57:99:177,0,126	0/0:17,0:17:45.15:0,45,1681	0/0:47,0:47:99:0,111,3277	0/0:49,0:38:96.26:0,96,1755	0/0:40,0:40:93.24:0,93,3194	0/1:117,12:126:99:2289,0,1172	1/1:45,3:47:1.15:8,1,0	0/1:80,5:85:24.27:24,0,2152	0/1:66,6:72:99:177,0,2866	0/0:66,4:70:30.31:0,30,2347	0/0:54,0:53:99:0,132,4107	0/0:46,0:46:99:0,117,3475	0/1:32,1:33:99:255,0,382	0/1:36,0:34:99:223,0,417	0/1:29,0:24:99:188,0,354	0/1:81,4:85:16.20:16,0,284	0/1:172,0:166:99:238,0,1166	0/1:72,24:95:36.38:36,0,1334	0/1:58,8:64:18.26:18,0,772	0/0:51,1:52:47.24:0,47,1703	0/1:44,3:47:85.72:111,0,86	0/1:82,7:86:99:1489,0,566	0/1:35,2:37:99:310,0,504	0/1:22,4:25:99:337,0,403
chr10	43692981	.	CACAT	C	1074.26	PASS	AB=0.997;AC=13;AF=0.232;AN=56;BaseQRankSum=12.231;DP=1590;FS=1.679;HRun=0;HaplotypeScore=584.6280;InbreedingCoeff=-0.1653;MQ=41.59;MQ0=19;MQRankSum=-10.206;QD=1.78;ReadPosRankSum=4.027;VQSLOD=-0.2676;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:54:8.47:0,8,503	0/1:26,0:26:86.03:86,0,87	0/0:34,0:13:38.59:0,39,403	0/0:33,0:11:26.93:0,27,421	0/1:58,0:57:65.15:65,0,262	0/0:18,0:18:48.15:0,48,1173	0/0:45,0:45:99:0,110,2610	0/0:51,0:40:99:0,114,2286	0/0:39,0:39:96.28:0,96,2381	0/1:120,0:117:99:441,0,1660	1/1:48,0:47:1.71:22,2,0	0/0:80,0:80:34.58:0,35,1605	0/1:67,0:67:16.89:17,0,2093	0/0:67,0:67:82.06:0,82,1776	0/0:55,0:54:99:0,138,3307	0/0:46,0:46:99:0,117,2812	0/1:35,0:35:55.92:56,0,666	0/1:33,0:33:38.38:38,0,800	0/1:27,0:23:28.12:28,0,521	0/0:84,0:85:26.09:0,26,346	0/0:168,3:166:46.68:0,47,2804	0/0:93,0:92:10.30:0,10,1059	0/0:61,1:61:10.80:0,11,674	0/0:51,0:51:46.79:0,47,1222	0/1:46,0:46:36.10:36,0,119	0/1:81,0:79:99:354,0,1258	0/1:37,0:37:2.70:3,0,627	0/1:25,1:25:77.13:77,0,899
chr10	43692982	.	A	ACT	2908.46	PASS	AB=0.959;AC=17;AF=0.304;AN=56;BaseQRankSum=5.466;DP=1579;FS=29.115;HRun=0;HaplotypeScore=547.2058;InbreedingCoeff=-0.3150;MQ=41.72;MQ0=19;MQRankSum=-6.123;QD=2.83;ReadPosRankSum=-1.614;VQSLOD=-0.2692;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:52,2:52:27.58:28,0,323	0/1:26,0:26:47.27:218,0,47	0/0:34,0:13:35.96:0,36,374	0/0:33,0:10:27.01:0,27,325	0/1:52,3:57:99:190,0,203	0/0:19,0:19:48.11:0,48,707	0/0:46,0:46:99:0,120,1718	0/0:52,0:41:99:0,114,1487	0/0:38,0:39:99:0,99,1453	0/1:113,0:113:99:351,0,1994	1/1:47,0:46:2.19:47,2,0	0/1:73,0:79:99:162,0,872	0/1:63,0:67:42.19:42,0,1322	0/1:64,1:67:14.35:14,0,989	0/0:54,0:53:99:0,141,2046	0/0:45,0:45:99:0,117,1739	0/1:36,1:37:99:195,0,496	0/1:30,2:33:99:163,0,688	0/1:27,0:23:98.22:98,0,455	0/1:84,0:84:99:157,0,226	0/1:159,11:165:99:201,0,1881	0/0:88,0:91:43.65:0,44,628	0/0:60,0:61:30.45:0,30,437	0/0:51,0:51:48.91:0,49,736	0/1:46,0:46:42.72:43,0,122	0/1:74,2:77:99:484,0,1187	0/1:34,2:37:99:677,0,366	0/0:26,0:25:16.35:0,16,742
chr10	43693012	.	C	CCA	23339.32	PASS	AB=0.649;AC=40;AF=0.714;AN=56;BaseQRankSum=-6.216;DP=1431;FS=15.539;HRun=0;HaplotypeScore=363.2255;InbreedingCoeff=0.6535;MQ=45.07;MQ0=9;MQRankSum=1.475;QD=19.70;ReadPosRankSum=5.435;VQSLOD=4.3415;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:17,43:62:75.24:1254,75,0	1/1:7,6:16:13.59:180,14,0	0/0:53,0:31:75.15:0,75,884	0/0:39,0:22:53.59:0,54,593	1/1:12,21:36:21.07:352,21,0	0/0:14,0:14:29.99:0,30,360	0/0:40,0:40:87.08:0,87,1081	0/0:59,0:59:99:0,112,1671	0/0:41,0:41:97.81:0,98,1205	0/1:36,44:86:99:2167,0,105	1/1:20,20:43:6.02:101,6,0	1/1:13,51:64:72.19:1169,72,0	1/1:18,42:61:61.13:1433,61,0	1/1:15,33:49:51.71:991,52,0	1/1:9,33:41:40.07:1217,40,0	1/1:3,31:34:10.92:1279,11,0	1/1:7,40:48:41.50:1389,41,0	1/1:9,26:37:20.93:1046,21,0	0/1:12,10:20:23.57:458,0,24	1/1:30,32:64:26.99:451,27,0	1/1:29,140:176:99:3612,218,0	0/1:29,35:69:5.47:469,0,5	1/1:13,23:38:30.10:487,30,0	1/1:15,37:52:64.98:1102,65,0	1/1:6,26:37:18.05:300,18,0	0/1:20,54:76:6.68:2020,0,7	1/1:8,13:22:25.33:511,25,0	1/1:5,31:39:50.35:1352,50,0
chr10	43693323	.	C	CTTATTTATTTATTTAT	5520.53	PASS	AC=30;AF=0.833;AN=36;BaseQRankSum=0.846;DP=319;FS=3.835;HRun=0;HaplotypeScore=141.6703;InbreedingCoeff=0.4772;MQ=72.82;MQ0=1;MQRankSum=-3.890;QD=28.17;ReadPosRankSum=-2.199;VQSLOD=3.7447;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:9,0:9:6:58,6,0	./.	./.	./.	1/1:9,0:10:3.01:56,3,0	0/0:14,0:14:9.03:0,9,391	0/0:7,0:7:3.01:0,3,130	1/1:36,0:35:48.12:1578,48,0	0/0:13,0:13:11.97:0,12,440	1/1:12,1:13:9.03:561,9,0	./.	1/1:5,0:5:3.01:164,3,0	1/1:8,0:8:3.01:207,3,0	./.	1/1:11,0:13:3.01:164,3,0	1/1:12,0:12:6.01:120,6,0	1/1:20,0:20:14.02:325,14,0	1/1:12,0:12:12.04:596,12,0	1/1:23,0:25:18.06:592,18,0	./.	./.	./.	./.	1/1:4,0:4:3.01:99,3,0	1/1:8,1:9:3.01:226,3,0	1/1:9,3:12:9.03:543,9,0	1/1:6,0:7:9.03:231,9,0	./.
chr10	43693538	.	GA	G	1068.11	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=10.448;DP=466;FS=1.942;HRun=2;HaplotypeScore=52.5669;InbreedingCoeff=0.9245;MQ=84.80;MQ0=0;MQRankSum=0.858;QD=23.22;ReadPosRankSum=2.717;VQSLOD=3.5934;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,33:38:99:1000,114,0	0/0:2,0:2:6.02:0,6,90	0/0:18,0:18:40.75:0,41,599	0/0:16,0:15:36.10:0,36,511	1/1:1,7:8:20.98:189,21,0	0/0:19,0:19:51.17:0,51,763	0/0:24,0:24:69.20:0,69,983	0/0:20,0:19:57.19:0,57,836	0/0:19,0:19:57.09:0,57,802	0/0:11,0:11:27.04:0,27,362	0/0:13,0:13:39.04:0,39,515	0/0:15,0:14:42.14:0,42,627	0/0:16,0:16:45.15:0,45,674	0/0:18,0:18:51.13:0,51,739	0/0:17,0:17:51.17:0,51,764	0/0:15,0:15:42.14:0,42,628	0/0:31,0:31:90.26:0,90,1319	0/0:23,0:23:66.18:0,66,946	0/0:22,0:22:66.20:0,66,930	0/0:14,0:14:42.13:0,42,609	0/0:30,0:30:90.27:0,90,1305	0/0:4,0:4:12.04:0,12,180	0/0:7,0:7:21.07:0,21,314	0/0:27,0:27:75.25:0,75,1118	0/0:8,0:8:24.06:0,24,322	0/0:16,0:15:42.09:0,42,586	0/0:6,0:6:17.97:0,18,219	0/0:9,0:9:27.04:0,27,355
chr10	43693544	.	GA	G	1152.51	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=10.593;DP=472;FS=4.634;HRun=1;HaplotypeScore=52.7133;InbreedingCoeff=0.9195;MQ=86.67;MQ0=0;MQRankSum=-0.760;QD=25.05;ReadPosRankSum=2.405;VQSLOD=3.6526;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,33:39:99:1064,110,0	0/0:2,0:2:6.02:0,6,96	0/0:21,0:21:54.80:0,55,809	0/0:16,0:15:36.10:0,36,550	1/1:0,7:7:21.01:209,21,0	0/0:18,0:18:54.18:0,54,858	0/0:24,0:24:69.16:0,69,1027	0/0:21,0:20:60.19:0,60,915	0/0:19,0:19:51.17:0,51,813	0/0:8,0:8:21.07:0,21,335	0/0:12,0:12:30.10:0,30,478	0/0:15,0:14:42.14:0,42,668	0/0:19,0:19:54.12:0,54,801	0/0:17,0:17:48.16:0,48,765	0/0:18,0:18:54.16:0,54,834	0/0:16,0:16:45.14:0,45,694	0/0:34,0:34:99:0,99,1458	0/0:24,0:24:69.16:0,69,1005	0/0:22,0:22:63.20:0,63,980	0/0:15,0:15:45.15:0,45,709	0/0:28,0:28:81.28:0,81,1292	0/0:4,0:4:12.04:0,12,191	0/0:8,0:8:24.07:0,24,355	0/0:29,0:29:84.24:0,84,1265	0/0:7,0:7:21.06:0,21,314	0/0:15,0:14:42.11:0,42,642	0/0:5,0:5:15.03:0,15,215	0/0:9,0:9:27.09:0,27,430
chr10	43693705	.	CA	C	902.50	PASS	AB=0.802;AC=21;AF=0.420;AN=50;BaseQRankSum=0.255;DP=277;FS=2.523;HRun=11;HaplotypeScore=63.1069;InbreedingCoeff=0.5915;MQ=31.20;MQ0=43;MQRankSum=-2.542;QD=6.59;ReadPosRankSum=1.836;VQSLOD=1.8840;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:12,2:12:3.91:4,0,135	0/0:3,0:3:7.45:0,7,41	./.	./.	0/0:14,0:13:12.02:0,12,125	0/0:8,0:7:8.79:0,9,68	0/0:15,0:12:18.51:0,19,187	0/0:11,0:9:23.99:0,24,217	0/0:9,0:9:17.87:0,18,161	0/1:3,7:10:8.69:126,0,9	1/1:2,3:4:8.99:74,9,0	0/1:12,1:10:10.22:10,0,95	0/0:13,0:12:21.05:0,21,224	0/0:6,0:6:3.48:0,3,32	1/1:4,3:7:8.11:72,8,0	0/0:5,1:5:0:0,0,0	0/0:26,0:18:21.93:0,22,223	1/1:13,6:11:8.97:74,9,0	1/1:5,9:11:17.96:148,18,0	1/1:2,1:2:2.99:25,3,0	./.	0/0:8,0:7:9.49:0,9,97	0/0:6,0:5:8.41:0,8,57	0/0:7,0:3:3.01:0,3,31	1/1:1,7:6:14.98:123,15,0	1/1:3,8:11:23:178,23,0	1/1:4,10:10:23.96:196,24,0	1/1:14,2:3:5.99:49,6,0
chr10	43693745	.	AGAAC	A	2272.89	PASS	AB=0.990;AC=47;AF=0.839;AN=56;BaseQRankSum=-2.238;DP=375;FS=15.994;HRun=0;HaplotypeScore=72.4814;InbreedingCoeff=-0.2244;MQ=45.53;MQ0=40;MQRankSum=-3.320;QD=6.06;ReadPosRankSum=-1.235;VQSLOD=0.5106;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:16:7.28:224,7,0	1/1:6,0:6:8.28:99,8,0	1/1:48,1:8:1.32:17,1,0	0/1:70,0:15:14.49:14,0,16	1/1:15,0:14:19.12:146,19,0	0/1:11,0:11:42.93:43,0,224	0/1:13,0:13:82.91:83,0,243	1/1:16,0:15:26.18:259,26,0	0/1:10,0:8:21.60:22,0,137	1/1:2,7:9:17.45:127,17,0	1/1:3,0:3:6.29:45,6,0	0/1:11,0:9:16.57:17,0,52	1/1:8,0:8:0.85:81,1,0	1/1:5,0:5:5.96:48,6,0	0/1:8,0:7:21.70:90,0,22	0/1:10,0:8:48.89:49,0,71	1/1:23,0:20:26.91:268,27,0	1/1:15,0:11:25.46:191,25,0	1/1:12,0:5:11.29:84,11,0	1/1:6,0:5:11.03:65,11,0	1/1:6,0:4:5.25:23,5,0	0/1:5,0:4:8.66:9,0,11	0/1:9,0:7:25.26:32,0,25	1/1:2,0:1:3:29,3,0	1/1:8,0:6:5.48:29,5,0	1/1:10,0:9:17.97:179,18,0	1/1:7,0:7:16.93:100,17,0	1/1:4,0:4:9.95:43,10,0
chr10	43693748	.	AC	A	1305.60	PASS	AB=0.988;AC=45;AF=0.804;AN=56;BaseQRankSum=-0.262;DP=358;FS=10.147;HRun=1;HaplotypeScore=62.4395;InbreedingCoeff=-0.0819;MQ=46.25;MQ0=39;MQRankSum=-0.373;QD=3.69;ReadPosRankSum=1.323;VQSLOD=-0.5509;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:16:10.30:115,10,0	0/1:6,0:6:7.36:14,0,7	1/1:51,4:10:1.53:18,2,0	0/1:65,9:15:1.43:1,0,36	1/1:16,0:14:23.32:123,23,0	0/1:10,0:10:26.45:26,0,131	0/1:14,0:14:35.18:35,0,222	0/1:16,0:15:7.52:116,0,8	0/1:10,0:8:10.88:11,0,82	1/1:9,0:9:16.79:99,17,0	1/1:2,0:2:5.91:38,6,0	0/1:11,0:8:13.66:14,0,29	0/1:8,0:8:12.99:19,0,13	1/1:5,0:5:5.90:36,6,0	1/1:8,0:7:18.76:136,19,0	1/1:8,2:8:3.56:104,4,0	1/1:24,0:21:26.02:197,26,0	1/1:12,0:8:15.04:70,15,0	1/1:10,0:3:8.85:59,9,0	1/1:3,0:2:0.47:1,0,0	1/1:4,0:3:4.87:17,5,0	0/0:4,0:3:0.07:0,0,0	0/1:9,0:7:23.19:36,0,23	1/1:2,0:1:2.68:11,3,0	1/1:6,0:5:7.18:30,7,0	1/1:5,0:4:7.75:45,8,0	1/1:5,0:5:10.47:51,10,0	1/1:3,0:3:4.88:15,5,0
chr10	43693760	.	AAG	A	786.92	PASS	AB=0.958;AC=40;AF=0.769;AN=52;BaseQRankSum=2.476;DP=342;FS=2.381;HRun=0;HaplotypeScore=72.9103;InbreedingCoeff=0.1995;MQ=59.47;MQ0=30;MQRankSum=-1.566;QD=3.45;ReadPosRankSum=-1.340;VQSLOD=1.8437;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:12,0:12:17.45:113,17,0	1/1:5,0:5:7.83:33,8,0	0/1:76,0:18:17.58:18,0,58	0/0:87,0:21:5.90:0,6,75	1/1:14,0:12:16.32:89,16,0	0/1:11,0:11:15.87:16,0,223	0/0:15,0:15:0.55:0,1,340	1/1:12,0:10:10.46:69,10,0	0/1:9,0:7:2.57:3,0,88	1/1:5,0:5:4.36:20,4,0	1/1:1,0:1:2.94:18,3,0	0/1:4,2:5:32.87:33,0,34	1/1:7,0:7:14.81:116,15,0	1/1:1,3:4:0.47:1,0,0	0/0:11,0:10:11.25:0,11,94	0/1:9,0:7:19.33:30,0,19	1/1:20,0:17:8.44:80,8,0	1/1:12,0:9:15.44:84,15,0	1/1:4,0:1:2.68:11,3,0	./.	1/1:2,0:1:2.96:19,3,0	1/1:3,1:3:8.97:76,9,0	1/1:3,1:3:5.88:53,6,0	1/1:2,0:1:2.98:21,3,0	./.	1/1:2,0:2:1.36:3,1,0	1/1:5,0:5:5.10:23,5,0	0/1:2,0:2:0:0,0,0
chr10	43693790	.	AAAG	A	1137.46	PASS	AB=0.813;AC=34;AF=0.680;AN=50;BaseQRankSum=5.521;DP=300;FS=20.706;HRun=0;HaplotypeScore=72.8237;InbreedingCoeff=0.6369;MQ=59.44;MQ0=13;MQRankSum=-3.821;QD=9.48;ReadPosRankSum=-0.958;VQSLOD=0.8206;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:11:3.41:20,3,0	1/1:0,4:4:8.89:99,9,0	0/0:62,0:16:20.62:0,21,243	0/0:60,0:16:25.61:0,26,261	1/1:9,0:9:7.73:52,8,0	0/0:14,0:14:24.92:0,25,486	0/0:12,0:12:26.12:0,26,464	0/1:12,0:11:56.50:56,0,121	0/0:11,0:10:1.52:0,2,233	1/1:8,0:8:16.89:110,17,0	1/1:6,0:6:17.33:103,17,0	1/1:6,1:7:8.86:69,9,0	1/1:10,0:10:26.32:195,26,0	./.	0/0:12,0:11:30.06:0,30,483	0/0:7,0:5:12.01:0,12,223	1/1:12,1:11:18.98:173,19,0	1/1:6,0:4:9.56:52,10,0	1/1:4,0:3:4.55:31,5,0	1/1:4,0:4:8.46:44,8,0	./.	1/1:3,1:4:11.93:123,12,0	0/1:2,3:4:2.58:37,0,3	1/1:2,3:4:5.88:36,6,0	1/1:5,0:5:7.40:41,7,0	1/1:5,0:5:13.49:68,13,0	1/1:2,0:2:1.36:3,1,0	./.
chr10	43693791	.	AAG	A	1378.94	PASS	AB=0.917;AC=34;AF=0.680;AN=50;BaseQRankSum=6.440;DP=302;FS=35.392;HRun=0;HaplotypeScore=69.9544;InbreedingCoeff=0.7263;MQ=61.57;MQ0=11;MQRankSum=-4.248;QD=11.12;ReadPosRankSum=-1.113;VQSLOD=1.5448;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:12,0:12:5.87:41,6,0	1/1:4,0:4:8.88:63,9,0	0/0:61,0:18:21.34:0,21,240	0/0:58,0:16:25.49:0,25,214	1/1:9,0:9:11.92:84,12,0	0/0:15,0:15:10.60:0,11,390	0/0:12,0:12:25.75:0,26,356	0/0:12,0:11:18.14:0,18,153	0/1:12,0:11:6.22:6,0,188	1/1:8,0:8:17.77:115,18,0	1/1:6,0:6:17.70:113,18,0	1/1:1,6:7:8.98:100,9,0	1/1:7,3:10:26.91:312,27,0	./.	0/0:12,0:11:29.31:0,29,364	0/0:6,0:4:12.04:0,12,172	1/1:14,0:12:21.46:142,21,0	1/1:7,0:5:14.89:109,15,0	1/1:4,0:3:5.98:48,6,0	1/1:4,0:4:8.26:42,8,0	./.	1/1:1,3:4:11.99:123,12,0	0/1:4,1:4:1.31:19,0,1	1/1:4,1:4:5.97:59,6,0	1/1:6,0:6:14.43:85,14,0	1/1:5,0:5:13.18:97,13,0	1/1:2,0:2:0.94:3,1,0	./.
chr10	43693792	.	AG	A	1354.92	PASS	AB=1.000;AC=36;AF=0.720;AN=50;BaseQRankSum=7.076;DP=297;FS=36.828;HRun=1;HaplotypeScore=65.6366;InbreedingCoeff=0.6438;MQ=60.72;MQ0=11;MQRankSum=-3.838;QD=9.82;ReadPosRankSum=-0.458;VQSLOD=-0.6715;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,10:12:6.02:78,6,0	1/1:4,0:4:8.89:60,9,0	0/0:56,2:17:22.24:0,22,211	0/0:53,1:16:18.68:0,19,181	1/1:0,9:9:17.83:140,18,0	0/1:15,0:15:12.32:12,0,286	0/0:12,0:12:20.88:0,21,247	0/0:13,0:12:31.04:0,31,201	0/1:11,0:10:34.33:34,0,125	1/1:8,0:8:21.46:140,21,0	1/1:6,0:6:17.31:101,17,0	1/1:7,0:7:8.95:67,9,0	1/1:8,2:10:26.75:203,27,0	./.	0/0:12,0:11:21.07:0,21,264	0/0:6,0:4:12.01:0,12,124	1/1:14,0:12:19.96:131,20,0	1/1:7,0:5:14.92:112,15,0	1/1:4,0:3:7.54:53,8,0	1/1:4,0:4:7:32,7,0	./.	1/1:4,0:4:11.91:85,12,0	1/1:5,0:4:2:17,2,0	1/1:5,0:4:5.94:42,6,0	1/1:6,0:6:14.70:103,15,0	1/1:5,0:5:14.92:115,15,0	1/1:2,0:2:3.11:8,3,0	./.
chr10	43693798	.	AG	A	701.58	PASS	AB=1.000;AC=21;AF=0.389;AN=54;BaseQRankSum=6.860;DP=311;FS=11.678;HRun=1;HaplotypeScore=72.5137;InbreedingCoeff=0.7886;MQ=60.24;MQ0=8;MQRankSum=-5.601;QD=10.63;ReadPosRankSum=-0.348;VQSLOD=0.2264;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:16:7:0,7,66	0/0:5,0:5:6.24:0,6,34	0/0:46,3:15:29.98:0,30,353	0/0:45,1:16:30.85:0,31,255	0/0:10,0:10:20.35:0,20,127	0/0:16,0:16:21.63:0,22,477	0/0:11,0:11:26.33:0,26,353	0/0:20,0:18:50.12:0,50,618	0/1:9,0:9:13.77:14,0,186	1/1:8,0:8:21.43:136,21,0	1/1:6,0:6:16.90:100,17,0	0/0:9,0:9:12.77:0,13,87	0/0:9,1:10:18.61:0,19,145	./.	0/0:11,0:10:25.56:0,26,363	0/0:7,0:5:15.02:0,15,172	0/0:14,0:12:19.31:0,19,135	1/1:7,0:5:14.89:110,15,0	1/1:7,1:6:14.98:105,15,0	1/1:4,0:4:6.56:30,7,0	1/1:3,0:2:2.97:20,3,0	0/0:5,0:5:13.64:0,14,75	0/0:6,0:5:7.73:0,8,58	0/0:9,0:8:17.49:0,17,138	1/1:7,1:8:19.95:139,20,0	1/1:7,1:8:23.80:178,24,0	1/1:3,0:3:5.43:30,5,0	1/1:0,2:2:5.93:39,6,0
chr10	43694226	.	T	TATG	5460.49	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-7.220;DP=694;FS=1.958;HRun=0;HaplotypeScore=128.9397;InbreedingCoeff=0.9987;MQ=70.48;MQ0=0;MQRankSum=-2.715;QD=47.90;ReadPosRankSum=2.338;VQSLOD=6.7952;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,35:41:87.30:1941,87,0	1/1:3,6:9:21.07:443,21,0	0/0:33,0:32:81.28:0,81,1311	0/0:21,0:21:34.50:0,34,781	1/1:0,26:27:57.20:1272,57,0	0/0:14,0:14:42.13:0,42,662	0/0:24,0:24:63.11:0,63,995	0/0:23,0:23:66.21:0,66,1038	0/0:31,0:31:90.27:0,90,1420	0/0:22,0:22:63.22:0,63,1029	0/0:16,0:16:42.14:0,42,686	0/0:29,0:29:84.29:0,84,1369	0/0:28,0:28:78.27:0,78,1274	0/0:22,0:22:66.23:0,66,1066	0/0:38,0:38:99:0,114,1803	0/0:24,0:24:69.22:0,69,1098	1/1:6,30:37:78.85:1804,79,0	0/0:18,0:18:45.15:0,45,727	0/0:23,0:23:60.20:0,60,950	0/0:21,0:21:57.19:0,57,923	0/0:40,0:40:99:0,117,1896	0/0:15,0:15:42.14:0,42,670	0/0:23,0:23:60.20:0,60,969	0/0:29,0:29:81.28:0,81,1314	0/0:16,0:16:33.11:0,33,539	0/0:27,0:27:75.24:0,75,1194	0/0:27,0:25:75.24:0,75,1200	0/0:16,0:16:42.14:0,42,686
chr10	43695419	.	CTGAGGTACTGT	C	17801.61	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=12.837;DP=465;FS=5.027;HRun=0;HaplotypeScore=167.2567;InbreedingCoeff=0.9509;MQ=74.10;MQ0=0;MQRankSum=-13.640;QD=58.75;ReadPosRankSum=3.258;VQSLOD=4.5777;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,30:39:69.24:2434,69,0	0/0:2,0:2:6.02:0,6,333	0/0:19,0:19:12.29:0,12,2466	0/0:31,0:31:81.28:0,81,3975	1/1:0,17:17:24.08:846,24,0	0/0:21,0:21:63.20:0,63,3380	0/0:20,0:20:60.21:0,60,3375	1/1:11,14:25:39.13:1275,39,0	0/0:9,0:9:24.08:0,24,1316	1/1:2,13:15:39.12:1249,39,0	1/1:0,10:10:18.06:635,18,0	1/1:0,21:21:48.16:1693,48,0	1/1:1,8:9:12.04:424,12,0	1/1:3,15:18:36.12:1231,36,0	0/0:20,0:20:60.21:0,60,3293	0/0:15,0:15:42.14:0,42,2381	0/0:25,0:25:57.20:0,57,3077	1/1:2,11:13:21.07:741,21,0	1/1:5,9:14:27.04:785,27,0	1/1:2,7:9:18.06:635,18,0	1/1:6,11:17:8.77:317,9,0	1/1:4,9:13:21.07:741,21,0	1/1:2,11:13:17.95:635,18,0	1/1:7,17:24:21.07:741,21,0	1/1:0,5:5:15.05:529,15,0	1/1:6,13:19:36.10:1138,36,0	1/1:2,15:17:39.13:1331,39,0	1/1:1,4:5:12.04:423,12,0
chr10	43695463	.	AGATAACCAGGGTCTAG	A	824.11	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=2.789;DP=545;FS=22.145;HRun=0;HaplotypeScore=279.7351;InbreedingCoeff=0.9043;MQ=58.93;MQ0=1;MQRankSum=-3.852;QD=34.34;ReadPosRankSum=2.588;VQSLOD=1.5228;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:90.31:0,90,5713	1/1:0,3:3:6.02:256,6,0	0/0:25,0:23:45.15:0,45,2338	0/0:22,0:22:50.91:0,51,2867	0/0:24,0:24:51.18:0,51,3300	0/0:24,0:24:66.23:0,66,4559	0/0:20,0:20:57.20:0,57,3905	0/0:32,0:32:69.24:0,69,4811	0/0:11,0:11:33.11:0,33,2368	0/0:17,0:17:48.16:0,48,3063	0/0:13,0:13:24.08:0,24,1634	0/0:23,0:23:42.14:0,42,2781	0/0:17,0:17:41.84:0,42,2977	0/0:20,0:20:51.13:0,51,3228	0/0:28,0:28:78.27:0,78,5619	0/0:22,0:22:60.21:0,60,4298	1/1:11,10:21:13.29:674,13,0	0/0:15,0:15:33.11:0,33,2186	0/0:15,0:15:27.09:0,27,1846	0/0:5,0:5:12.04:0,12,604	0/0:23,0:23:48.16:0,48,3409	0/0:18,0:18:45.15:0,45,3015	0/0:16,0:16:27.09:0,27,1983	0/0:24,0:24:48.16:0,48,3250	0/0:12,0:12:33.11:0,33,2386	0/0:20,0:20:51.18:0,51,3932	0/0:22,0:22:51.18:0,51,3423	0/0:7,0:7:15.05:0,15,1039
chr10	43695667	.	AGT	A	6879.82	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=12.408;DP=653;FS=3.283;HRun=0;HaplotypeScore=118.4335;InbreedingCoeff=0.9948;MQ=69.05;MQ0=0;MQRankSum=-2.939;QD=29.78;ReadPosRankSum=1.332;VQSLOD=6.4653;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:53,1:54:99:0,109,2360	0/0:5,0:5:15.05:0,15,252	0/0:27,0:27:68.70:0,69,1067	0/0:25,0:23:50.82:0,51,749	0/0:15,0:15:36.12:0,36,598	0/0:26,0:26:75.24:0,75,1240	0/0:25,0:25:69.24:0,69,1160	0/0:33,0:33:75.24:0,75,1216	0/0:14,0:14:39.13:0,39,658	1/1:6,17:23:54.01:668,54,0	1/1:2,13:15:24.07:308,24,0	0/0:18,0:18:51.17:0,51,857	0/0:18,0:18:48.16:0,48,809	0/0:31,0:31:87.28:0,87,1433	0/0:22,1:23:27.61:0,28,1010	0/0:17,0:17:47.02:0,47,803	0/0:26,0:26:75.26:0,75,1264	1/1:1,20:21:57.19:734,57,0	1/1:9,16:25:48.13:588,48,0	1/1:1,18:19:54.18:695,54,0	1/1:8,52:60:99:1603,126,0	0/0:17,0:17:51.17:0,51,852	0/0:15,0:15:36.12:0,36,606	0/0:33,0:33:93.32:0,93,1568	1/1:0,5:5:15.01:174,15,0	1/1:2,24:26:69.21:875,69,0	1/1:6,19:25:60.19:772,60,0	1/1:0,12:12:36.12:463,36,0
chr10	43696924	.	CA	C	1018.23	PASS	AB=1.000;AC=30;AF=0.536;AN=56;BaseQRankSum=-0.448;DP=400;FS=0.552;HRun=15;HaplotypeScore=56.3942;InbreedingCoeff=0.7093;MQ=49.03;MQ0=19;MQRankSum=1.016;QD=5.50;ReadPosRankSum=2.728;VQSLOD=2.1319;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,1:38:44.57:0,45,351	0/1:6,0:6:3.31:3,0,48	1/1:3,1:2:2.89:18,3,0	0/1:6,0:4:14.28:14,0,22	0/0:9,0:16:19.70:0,20,137	0/0:16,1:16:15.45:0,15,239	0/0:21,0:18:27.43:0,27,229	1/1:11,4:16:4.36:90,4,0	0/0:13,0:11:26.88:0,27,213	1/1:5,10:14:25.60:160,26,0	1/1:7,2:9:4.90:25,5,0	0/0:7,0:7:11.87:0,12,83	0/0:10,0:10:6.46:0,6,51	0/0:13,0:13:17.99:0,18,155	1/1:3,6:8:11.82:77,12,0	1/1:2,6:7:16.79:102,17,0	0/0:29,0:27:10.18:0,10,140	1/1:6,4:9:14.68:93,15,0	1/1:10,7:14:22.66:140,23,0	1/1:9,10:18:26.51:172,27,0	1/1:8,8:14:11.28:76,11,0	0/0:13,0:11:20.50:0,20,149	0/0:7,0:12:4.79:0,5,41	0/0:19,0:21:19.32:0,19,225	1/1:3,4:8:10.85:63,11,0	1/1:7,6:12:16.72:101,17,0	1/1:6,8:15:1.36:48,1,0	1/1:4,2:5:5.88:38,6,0
chr10	43697552	.	A	ATGCTTCTC	60505.95	PASS	AB=0.798;AC=46;AF=0.821;AN=56;BaseQRankSum=-5.044;DP=741;FS=5.695;HRun=0;HaplotypeScore=172.1393;InbreedingCoeff=0.7709;MQ=76.57;MQ0=4;MQRankSum=-16.527;QD=94.99;ReadPosRankSum=0.839;VQSLOD=5.4691;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,24:41:99:4024,102,0	1/1:7,5:13:39.09:1302,39,0	0/0:31,0:31:84.29:0,84,2213	0/0:24,0:24:63.19:0,63,1582	1/1:8,17:28:57.19:2100,57,0	0/0:15,0:15:45.15:0,45,1251	0/0:34,0:34:99:0,99,2744	1/1:20,11:34:99:3901,102,0	0/1:25,1:26:55.43:55,0,2071	1/1:6,17:30:84.27:3345,84,0	1/1:9,18:28:66.22:2398,66,0	1/1:9,18:30:72.25:2973,72,0	1/1:4,15:21:54.19:2405,54,0	1/1:14,16:33:87.30:3209,87,0	1/1:11,29:42:99:4342,108,0	0/1:13,17:30:7.86:2652,0,8	1/1:9,13:25:57.19:2224,57,0	1/1:9,3:14:27.09:1174,27,0	1/1:15,7:27:75.22:2824,75,0	1/1:11,20:32:78.27:3159,78,0	1/1:7,16:25:51.17:2082,51,0	1/1:6,12:18:45.15:1784,45,0	1/1:9,14:23:60.21:2398,60,0	1/1:12,10:24:45.15:1863,45,0	1/1:5,12:20:51.17:1975,51,0	1/1:7,16:25:72.23:3046,72,0	1/1:6,24:30:90.31:3739,90,0	1/1:6,8:14:42.14:1531,42,0
chr10	43698941	.	C	CTT	3642.37	PASS	AB=0.828;AC=40;AF=0.714;AN=56;BaseQRankSum=1.565;DP=514;FS=3.940;HRun=16;HaplotypeScore=100.0377;InbreedingCoeff=0.3339;MQ=59.37;MQ0=11;MQRankSum=-3.133;QD=8.11;ReadPosRankSum=-4.952;VQSLOD=-0.0000;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:19,7:30:23.29:381,23,0	0/1:6,0:12:14.33:14,0,31	0/0:24,0:12:7.15:0,7,44	0/1:21,0:10:1.88:2,0,35	0/1:23,0:22:1.71:118,0,2	0/0:15,0:19:28.73:0,29,226	0/0:7,0:8:11.47:0,11,79	1/1:26,5:30:20.05:343,20,0	0/0:13,0:14:19.87:0,20,138	1/1:7,1:24:32.91:324,33,0	1/1:7,2:18:22.17:195,22,0	1/1:18,1:21:16.32:194,16,0	0/1:13,2:17:2.57:170,0,3	1/1:12,0:13:14.36:96,14,0	1/1:6,1:22:12.96:85,13,0	1/1:12,3:16:30:308,30,0	0/1:13,0:15:32.25:32,0,46	1/1:10,1:12:15.26:125,15,0	1/1:10,0:24:37.61:330,38,0	1/1:14,1:15:20.80:184,21,0	1/1:9,1:10:4.26:39,4,0	1/1:3,4:7:11.46:92,11,0	0/1:10,2:12:10.45:80,0,10	0/1:18,3:23:36.47:105,0,36	1/1:5,0:10:4.82:33,5,0	1/1:17,0:36:26.21:294,26,0	0/1:3,1:15:0.95:60,0,1	1/1:6,2:7:3.01:37,3,0
chr10	43699246	.	T	TACACACAC	13494.60	PASS	AB=0.559;AC=43;AF=0.768;AN=56;BaseQRankSum=6.813;DP=852;FS=4.267;HRun=0;HaplotypeScore=225.0989;InbreedingCoeff=0.7770;MQ=45.36;MQ0=13;MQRankSum=-8.359;QD=22.38;ReadPosRankSum=1.637;VQSLOD=4.2639;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,0:31:33.28:669,33,0	1/1:6,5:12:21.07:713,21,0	0/0:57,0:25:58.56:0,59,1020	0/0:56,0:29:59.31:0,59,1060	1/1:3,0:27:5.92:54,6,0	0/0:31,0:31:90.26:0,90,2156	0/0:40,0:40:78.67:0,79,1642	1/1:13,0:28:50.94:844,51,0	0/0:38,0:38:99:0,102,2468	1/1:8,0:39:66.09:1210,66,0	1/1:4,0:22:10.57:255,11,0	1/1:7,0:36:42.12:852,42,0	1/1:5,0:28:24.07:480,24,0	1/1:7,0:28:24.08:489,24,0	1/1:4,39:51:44.85:1691,45,0	1/1:5,30:39:56.96:2087,57,0	1/1:3,7:11:6.01:254,6,0	1/1:6,0:18:9.02:156,9,0	1/1:8,0:23:1.67:730,2,0	1/1:5,0:20:0.66:182,1,0	0/1:12,0:57:0.04:0,0,1	1/1:4,0:24:23.76:462,24,0	1/1:2,0:21:8.42:176,8,0	0/0:6,0:25:0.94:0,1,1	1/1:0,0:16:14.38:324,14,0	1/1:5,0:29:59.87:1059,60,0	1/1:5,0:25:20.94:409,21,0	1/1:8,0:11:31.93:400,32,0
chr10	43699330	.	TACACACACAC	T	5409.11	PASS	AB=0.765;AC=23;AF=0.442;AN=52;BaseQRankSum=4.338;DP=733;FS=12.406;HRun=0;HaplotypeScore=224.7419;InbreedingCoeff=0.8548;MQ=46.53;MQ0=33;MQRankSum=-6.796;QD=18.65;ReadPosRankSum=3.209;VQSLOD=2.7680;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:14,4:18:6.02:107,6,0	1/1:2,0:9:9.03:210,9,0	./.	./.	1/1:14,8:23:11.80:249,12,0	0/0:23,0:25:42.13:0,42,1537	0/0:22,0:24:31.35:0,31,1350	0/0:33,0:29:30.10:0,30,871	0/0:33,0:35:60.19:0,60,2532	0/0:29,0:27:39.09:0,39,1274	0/0:13,0:16:30.09:0,30,1003	1/1:24,14:36:51.04:1289,51,0	1/1:18,6:24:36.11:947,36,0	1/1:17,9:26:18.06:464,18,0	1/1:29,10:39:34.04:769,34,0	0/1:18,8:25:99:537,0,120	1/1:13,0:15:8.24:147,8,0	0/0:20,0:26:51.18:0,51,1854	0/0:16,0:18:18.42:0,18,642	0/0:11,0:13:21.07:0,21,827	0/0:54,0:55:81.75:0,82,3127	1/1:15,2:16:13.59:302,14,0	1/1:20,1:20:8.64:117,9,0	1/1:27,3:30:14.12:270,14,0	0/0:9,0:9:15.05:0,15,498	0/0:18,0:16:31.90:0,32,802	0/0:17,0:19:33.08:0,33,1085	0/0:11,0:12:10.85:0,11,351
chr10	43699678	.	G	GGC	8340.98	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=-10.053;DP=537;FS=3.293;HRun=0;HaplotypeScore=66.6586;InbreedingCoeff=0.9277;MQ=63.56;MQ0=5;MQRankSum=2.583;QD=37.57;ReadPosRankSum=2.448;VQSLOD=7.1381;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,99,1436	0/0:12,0:12:36.08:0,36,505	0/0:34,0:21:42.11:0,42,660	0/1:40,0:22:7.63:8,0,557	0/0:23,0:23:63.21:0,63,926	0/0:20,0:20:48.15:0,48,688	0/0:18,0:18:54.17:0,54,775	0/0:22,0:22:63.16:0,63,857	0/0:14,0:14:42.14:0,42,618	1/1:2,13:14:36.12:655,36,0	1/1:2,14:15:38.97:706,39,0	0/0:17,0:17:48.16:0,48,706	0/0:9,0:9:27.09:0,27,398	0/0:4,0:4:12.04:0,12,176	0/0:24,0:24:63.21:0,63,927	0/0:12,0:12:36.12:0,36,526	0/0:27,0:27:69.23:0,69,1016	1/1:3,19:20:42.14:785,42,0	1/1:2,13:14:32.98:576,33,0	1/1:0,11:11:33.11:615,33,0	1/1:1,33:34:84.29:1570,84,0	0/0:6,0:5:15.05:0,15,211	0/0:13,0:13:30.10:0,30,441	0/0:22,0:22:48.16:0,48,707	1/1:0,16:16:48.16:897,48,0	1/1:2,20:22:60.18:1074,60,0	1/1:2,17:19:48.16:897,48,0	1/1:2,10:12:30.10:558,30,0
chr10	43700385	.	G	GA	5532.82	PASS	AB=0.604;AC=37;AF=0.661;AN=56;BaseQRankSum=-2.785;DP=491;FS=0.506;HRun=13;HaplotypeScore=55.3810;InbreedingCoeff=0.2652;MQ=64.61;MQ0=1;MQRankSum=0.748;QD=13.70;ReadPosRankSum=-0.988;VQSLOD=4.8841;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,1:25:37.01:190,37,0	1/1:2,7:9:12.01:111,12,0	0/0:19,0:7:0.90:0,1,4	0/0:10,0:3:1.23:0,1,3	1/1:4,1:19:31.46:166,31,0	0/0:22,0:22:17.83:0,18,261	0/0:17,1:18:16.79:0,17,260	0/1:13,13:28:17:262,0,17	0/0:18,0:18:37.67:0,38,252	1/1:8,19:25:11.13:376,11,0	0/1:3,6:9:2.56:121,0,3	1/1:4,15:19:32.87:292,33,0	1/1:7,6:14:17.86:154,18,0	1/1:0,15:15:33.04:306,33,0	0/1:6,12:18:8.13:218,0,8	0/1:4,14:18:5.04:243,0,5	1/1:2,22:25:56.23:551,56,0	0/1:5,9:15:8.25:204,0,8	0/1:6,9:17:6.20:237,0,6	0/1:3,5:8:2.54:121,0,3	1/1:3,12:16:29.87:265,30,0	1/1:3,8:10:20.97:186,21,0	1/1:6,13:19:12.45:258,12,0	1/1:1,9:12:6.12:175,6,0	1/1:4,8:16:10.92:119,11,0	1/1:9,20:29:39.46:502,39,0	0/1:7,15:23:9.10:240,0,9	0/1:3,9:12:5.17:234,0,5
chr10	43700678	.	TAGGTGAGAGGTGAGAGGTGAGAGGTGAG	T	5811.08	PASS	AB=1.000;AC=37;AF=0.771;AN=48;BaseQRankSum=6.507;DP=488;FS=0.000;HRun=0;HaplotypeScore=320.2165;InbreedingCoeff=0.6566;MQ=80.70;MQ0=5;MQRankSum=-1.953;QD=16.46;ReadPosRankSum=1.060;VQSLOD=2.8103;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:23:14.99:246,15,0	0/0:2,0:1:3:0,3,25	./.	./.	1/1:3,5:8:5.85:69,6,0	0/0:16,0:16:11.25:0,11,252	0/0:34,0:34:45.12:0,45,1074	1/1:13,0:13:2.97:20,3,0	0/0:18,0:18:30.05:0,30,755	1/1:7,19:26:50.33:571,50,0	0/0:5,4:9:1.55:0,2,4	1/1:18,0:18:17.84:291,18,0	1/1:11,0:11:15.05:266,15,0	1/1:15,0:15:27.04:365,27,0	1/1:15,0:15:21.06:389,21,0	1/1:15,0:14:30.08:624,30,0	0/1:32,0:32:85.69:275,0,86	1/1:14,0:14:19.27:358,19,0	1/1:10,6:16:17.92:167,18,0	1/1:6,0:6:3.01:43,3,0	1/1:59,0:59:59.38:923,59,0	./.	./.	1/1:27,0:26:18.77:226,19,0	1/1:13,0:12:11.99:200,12,0	1/1:11,10:21:29.64:402,30,0	1/1:15,0:15:18.04:296,18,0	1/1:6,0:6:8.99:78,9,0
chr10	43701460	.	AG	A	2159.55	PASS	AB=0.978;AC=31;AF=0.574;AN=54;BaseQRankSum=1.978;DP=491;FS=210.452;HRun=1;HaplotypeScore=51.6780;InbreedingCoeff=-0.2929;MQ=50.71;MQ0=37;MQRankSum=1.435;QD=4.96;ReadPosRankSum=-1.224;VQSLOD=-0.1673;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:45,0:44:33.92:34,0,159	0/1:6,0:6:0.01:92,0,0	./.	0/0:13,0:5:0.88:0,1,8	0/1:20,0:20:12.54:13,0,124	0/1:17,0:17:32.64:33,0,92	0/1:12,0:12:9.87:10,0,47	1/1:19,0:16:2.92:127,3,0	0/1:16,0:16:34.72:35,0,101	1/1:26,0:23:25.94:273,26,0	1/1:12,0:10:9.03:39,9,0	0/1:14,0:12:11.03:110,0,11	0/0:9,0:9:19.57:0,20,105	0/1:12,0:12:32.29:32,0,58	0/1:15,0:11:9.49:22,0,9	1/1:13,1:12:17.59:136,18,0	0/1:37,0:32:99:142,0,114	1/1:35,0:32:54.01:415,54,0	0/1:12,0:12:5.43:116,0,5	0/1:21,0:20:4.41:144,0,4	1/1:10,0:7:4.51:51,5,0	1/1:5,0:3:7.68:40,8,0	0/1:14,0:13:36.72:79,0,37	0/0:18,0:17:10.18:0,10,122	0/1:16,0:15:43.99:59,0,44	0/1:20,0:20:54.46:139,0,54	0/1:8,13:19:25.94:26,0,32	0/1:15,0:14:5.52:150,0,6
chr10	43702806	.	TTTTC	T	1238.82	PASS	AB=0.988;AC=21;AF=0.375;AN=56;BaseQRankSum=11.796;DP=511;FS=24.282;HRun=0;HaplotypeScore=91.3489;InbreedingCoeff=-0.5046;MQ=46.50;MQ0=36;MQRankSum=0.691;QD=3.49;ReadPosRankSum=0.410;VQSLOD=0.2508;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:17:42.11:0,42,565	0/1:8,0:8:36.78:45,0,37	0/0:28,0:5:9.03:0,9,108	0/0:21,0:5:6.64:0,7,28	0/1:34,0:33:85.11:85,0,509	0/0:22,0:21:59.96:0,60,798	0/0:17,0:15:31.38:0,31,528	0/1:22,0:20:55.90:56,0,340	0/0:19,0:19:32.79:0,33,304	0/1:17,1:16:55.09:136,0,55	0/1:23,0:23:11.52:12,0,152	0/1:14,0:12:39.77:40,0,185	0/0:13,0:11:28.30:0,28,299	0/1:16,0:14:36.34:36,0,245	0/1:13,0:12:29.30:29,0,42	0/1:17,2:17:99:127,0,130	0/1:31,0:27:99:170,0,187	0/1:19,0:17:56.81:57,0,97	0/1:19,0:16:62.55:63,0,259	0/1:22,1:21:51.91:52,0,121	1/1:2,0:2:1.24:15,1,0	0/1:18,0:18:66.24:66,0,362	0/1:12,0:12:30.28:30,0,281	0/1:7,0:4:19.69:20,0,38	0/1:12,0:10:18.03:18,0,103	0/1:23,0:22:99:164,0,139	0/1:21,1:20:83.01:177,0,83	0/0:18,0:18:12.80:0,13,100
chr10	43702807	.	TTTC	T	1958.46	PASS	AB=0.966;AC=23;AF=0.411;AN=56;BaseQRankSum=11.574;DP=493;FS=8.287;HRun=0;HaplotypeScore=82.0375;InbreedingCoeff=-0.3622;MQ=45.15;MQ0=36;MQRankSum=1.637;QD=5.40;ReadPosRankSum=1.492;VQSLOD=0.7544;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:20,0:19:3.64:4,0,326	0/1:7,1:8:23.44:59,0,23	0/0:26,0:5:8.99:0,9,78	0/0:18,0:4:3.26:0,3,9	0/1:33,0:32:94.25:94,0,288	0/0:22,0:21:53.90:0,54,619	0/0:17,0:15:38.53:0,39,439	0/1:22,0:20:60.71:61,0,187	0/0:16,0:16:23.85:0,24,195	0/1:13,4:15:0.42:159,0,0	0/1:21,0:21:45:45,0,48	0/1:14,0:12:42.46:42,0,89	0/0:13,0:11:9.44:0,9,157	0/1:16,0:14:73.91:74,0,148	0/1:13,0:12:5.77:46,0,6	0/1:17,2:17:33.82:202,0,34	0/1:29,2:27:24.40:280,0,24	0/1:16,2:16:3.76:175,0,4	0/1:17,0:14:66.86:67,0,130	0/1:18,1:17:6.19:141,0,6	1/1:2,0:2:2.07:16,2,0	0/1:17,0:17:72.44:72,0,201	0/1:13,0:13:55.98:56,0,173	0/1:7,0:4:19.70:20,0,25	0/1:12,0:10:37.05:61,0,37	0/1:22,1:22:32.49:209,0,32	1/1:17,4:19:8.21:232,8,0	0/0:18,0:18:6.17:0,6,33
chr10	43702808	.	TTC	T	2472.32	PASS	AB=0.970;AC=31;AF=0.574;AN=54;BaseQRankSum=10.495;DP=455;FS=11.599;HRun=0;HaplotypeScore=71.5377;InbreedingCoeff=0.0110;MQ=44.70;MQ0=36;MQRankSum=1.759;QD=7.10;ReadPosRankSum=2.037;VQSLOD=2.0265;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:19,0:18:10.60:11,0,149	0/1:8,0:8:10.11:39,0,10	0/0:25,0:5:8.59:0,9,49	./.	0/1:34,0:33:99:128,0,100	0/0:20,0:19:47.69:0,48,468	0/0:18,0:15:37.10:0,37,330	0/1:20,0:18:61.31:73,0,61	0/0:14,0:14:17.83:0,18,129	1/1:16,1:15:31.24:238,31,0	0/1:7,12:19:0.27:103,0,0	0/1:13,0:11:20.58:53,0,21	0/1:13,0:11:6.44:6,0,37	0/1:16,0:14:54.85:77,0,55	1/1:2,9:10:9.01:91,9,0	1/1:15,2:16:13.60:234,14,0	1/1:24,1:23:43.59:327,44,0	1/1:12,3:13:29.59:262,30,0	0/1:16,0:13:24.10:94,0,24	1/1:13,2:13:10.84:198,11,0	1/1:2,0:2:2.78:17,3,0	0/1:17,0:17:69.63:83,0,70	0/1:13,0:13:56.89:57,0,75	0/1:7,0:4:10.85:20,0,11	0/1:10,0:8:5.09:65,0,5	1/1:19,0:18:32.10:240,32,0	1/1:19,1:18:30.66:227,31,0	0/0:15,0:15:0.42:0,0,1
chr10	43702809	.	TC	T	2980.12	PASS	AC=46;AF=0.852;AN=54;BaseQRankSum=7.253;DP=371;FS=1.498;HRun=2;HaplotypeScore=59.9390;InbreedingCoeff=0.7546;MQ=46.44;MQ0=35;MQRankSum=-0.530;QD=10.21;ReadPosRankSum=-0.653;VQSLOD=1.2756;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,0:8:9.89:71,10,0	1/1:4,4:8:5.84:34,6,0	0/0:19,1:4:5.22:0,5,34	./.	1/1:20,0:19:30.74:228,31,0	0/0:18,0:17:41.91:0,42,360	0/0:17,0:14:38.69:0,39,262	1/1:8,3:9:19.42:130,19,0	0/0:10,0:10:14.81:0,15,115	1/1:15,1:14:32.68:229,33,0	1/1:16,2:18:14.87:115,15,0	1/1:11,0:9:19.73:141,20,0	1/1:11,0:9:12.69:76,13,0	1/1:12,0:10:18.81:136,19,0	1/1:11,0:10:8.87:57,9,0	1/1:15,0:14:29.64:206,30,0	1/1:21,1:18:43.59:298,44,0	1/1:11,0:11:29.51:196,30,0	1/1:8,5:10:17.60:153,18,0	1/1:13,1:13:26.46:163,26,0	1/1:2,0:2:2.94:18,3,0	1/1:13,0:13:24.03:167,24,0	1/1:9,0:9:15.84:116,16,0	1/1:5,0:2:3:26,3,0	1/1:9,0:7:11.85:81,12,0	1/1:14,0:13:32.74:234,33,0	1/1:19,1:18:35.52:240,36,0	1/1:3,11:15:2.97:20,3,0
chr10	43703091	.	GT	G	14139.86	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-7.180;DP=691;FS=6.257;HRun=1;HaplotypeScore=87.0807;InbreedingCoeff=0.9991;MQ=87.69;MQ0=0;MQRankSum=-2.464;QD=38.95;ReadPosRankSum=-0.696;VQSLOD=4.8789;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,138,1176	1/1:0,9:9:24.08:336,24,0	0/0:26,0:26:75.21:0,75,1113	0/0:25,0:25:72.24:0,72,1115	0/0:30,0:30:53.35:0,53,486	0/0:30,0:30:90.28:0,90,1381	0/0:24,0:24:72.24:0,72,1137	1/1:0,29:29:87.26:1181,87,0	0/0:30,0:30:90.29:0,90,1406	1/1:0,24:24:66.20:901,66,0	1/1:0,24:24:63.21:879,63,0	0/0:25,0:25:71.90:0,72,617	0/0:19,0:19:56.88:0,57,470	0/0:18,0:18:53.95:0,54,465	1/1:0,26:26:78.26:1091,78,0	1/1:0,7:7:21.07:294,21,0	1/1:0,37:37:99:1427,102,0	1/1:0,25:25:75.25:1049,75,0	1/1:0,24:24:72.18:959,72,0	1/1:0,12:12:36.12:503,36,0	1/1:0,53:53:99:2014,144,0	0/0:14,0:14:38.67:0,39,338	0/0:14,0:14:35.94:0,36,320	0/0:26,0:26:65.66:0,66,564	1/1:0,23:23:69.23:965,69,0	1/1:0,23:23:66.17:869,66,0	1/1:0,29:29:72.22:1004,72,0	1/1:1,17:18:48.16:669,48,0
chr10	43704051	.	C	CCTT	748.20	PASS	AB=0.900;AC=18;AF=0.529;AN=34;BaseQRankSum=1.291;DP=66;FS=0.000;HRun=0;HaplotypeScore=17.4714;InbreedingCoeff=0.2949;MQ=85.72;MQ0=3;MQRankSum=-1.761;QD=26.72;ReadPosRankSum=0.170;VQSLOD=3.1053;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:11,0:5:3.16:0,3,100	0/0:10,0:3:1.34:0,1,21	./.	0/0:2,0:2:6.02:0,6,106	0/0:3,0:3:6.02:0,6,106	0/0:7,0:7:21.03:0,21,335	./.	./.	0/0:0,1:1:2.97:0,3,20	1/1:3,0:3:9.03:148,9,0	./.	./.	0/1:4,0:4:16.85:55,0,17	./.	0/0:1,0:1:3.01:0,3,53	1/1:1,0:1:3.01:48,3,0	0/1:3,1:4:60.35:81,0,60	1/1:1,0:1:3.01:57,3,0	1/1:0,3:3:3.01:70,3,0	1/1:1,2:4:3.48:71,3,0	./.	1/1:2,0:2:5.98:67,6,0	1/1:2,2:4:2.51:134,3,0	./.	1/1:0,2:2:6.02:139,6,0	./.
chr10	43705778	.	GA	G	989.64	PASS	AB=0.978;AC=30;AF=0.536;AN=56;BaseQRankSum=6.015;DP=505;FS=4.274;HRun=11;HaplotypeScore=90.5809;InbreedingCoeff=0.7936;MQ=53.46;MQ0=28;MQRankSum=2.496;QD=3.48;ReadPosRankSum=3.471;VQSLOD=0.5186;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:27:46.98:0,47,486	1/1:8,0:7:12.23:42,12,0	0/0:24,0:5:11.48:0,11,105	0/1:21,1:8:3.25:3,0,42	0/0:27,1:24:39.53:0,40,394	0/0:25,1:25:23.41:0,23,429	0/0:13,0:13:26.99:0,27,261	1/1:17,2:15:13.98:81,14,0	0/0:15,1:16:11.33:0,11,285	1/1:23,0:22:43.11:176,43,0	0/1:18,0:17:7.24:55,0,7	0/0:12,0:10:20.17:0,20,164	0/0:11,0:10:12.80:0,13,158	0/0:14,0:13:26.31:0,26,239	1/1:16,2:17:4.07:48,4,0	1/1:10,0:9:7.74:35,8,0	1/1:16,1:17:31.57:139,32,0	1/1:14,3:14:20.84:114,21,0	1/1:17,1:16:29.34:146,29,0	1/1:26,0:25:30.35:127,30,0	1/1:10,1:10:4.97:17,5,0	0/0:15,0:15:26.02:0,26,238	0/0:24,0:23:46.14:0,46,389	0/0:10,0:10:26.01:0,26,224	1/1:20,0:20:12.22:42,12,0	1/1:19,0:17:10.47:62,10,0	1/1:24,1:23:28.73:99,29,0	1/1:11,2:11:4.72:17,5,0
chr10	43705787	.	AAAG	A	5710.97	PASS	AB=0.800;AC=29;AF=0.518;AN=56;BaseQRankSum=0.612;DP=483;FS=7.378;HRun=0;HaplotypeScore=87.0751;InbreedingCoeff=0.8389;MQ=52.14;MQ0=42;MQRankSum=3.451;QD=23.31;ReadPosRankSum=3.508;VQSLOD=4.4409;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:25:56.87:0,57,847	1/1:1,5:5:15.05:227,15,0	0/0:24,0:5:14.30:0,14,160	0/0:24,0:8:4.49:0,4,67	0/0:31,0:27:54.26:0,54,738	0/0:25,0:24:50.99:0,51,884	0/0:12,0:11:27:0,27,424	1/1:16,4:13:23.88:289,24,0	0/0:16,0:16:36.01:0,36,564	1/1:2,19:20:51.13:738,51,0	1/1:4,14:16:2.92:427,3,0	0/0:10,0:8:11.99:0,12,86	0/0:10,0:9:7.05:0,7,80	0/0:12,0:11:18.19:0,18,160	0/1:12,4:15:13.19:308,0,13	1/1:6,1:6:17.93:197,18,0	1/1:7,7:14:36.10:525,36,0	1/1:11,5:13:31.88:404,32,0	1/1:7,11:14:36.02:474,36,0	1/1:2,24:25:41.99:578,42,0	1/1:2,8:9:8.92:108,9,0	0/0:14,0:14:17:0,17,166	0/0:23,0:21:42.24:0,42,237	0/0:10,0:10:22.95:0,23,158	1/1:1,16:17:15.05:227,15,0	1/1:2,16:15:42.06:557,42,0	1/1:2,23:23:39.03:561,39,0	1/1:5,8:11:5.99:91,6,0
chr10	43705788	.	A	AG	1982.70	PASS	AB=0.989;AC=27;AF=0.482;AN=56;BaseQRankSum=1.710;DP=470;FS=12.167;HRun=0;HaplotypeScore=88.2503;InbreedingCoeff=0.6353;MQ=52.25;MQ0=42;MQRankSum=2.583;QD=7.66;ReadPosRankSum=4.091;VQSLOD=2.9781;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:25:52.01:0,52,657	1/1:5,1:5:14.86:112,15,0	0/0:24,0:5:14.82:0,15,144	0/1:24,0:8:14.07:14,0,54	0/0:30,0:26:57.29:0,57,623	0/0:24,0:23:50.78:0,51,598	0/0:12,0:11:29.96:0,30,335	1/1:15,3:11:12.79:118,13,0	0/0:16,0:16:35.72:0,36,385	1/1:20,0:19:23.84:217,24,0	0/1:16,1:16:19.91:167,0,20	0/0:10,0:8:21.06:0,21,252	0/0:11,0:9:26.99:0,27,284	0/0:11,0:11:30.03:0,30,343	1/1:12,5:16:32.54:288,33,0	1/1:5,2:6:17.78:136,18,0	1/1:9,5:14:35.80:295,36,0	1/1:10,5:13:0.67:166,1,0	1/1:16,1:13:16.85:169,17,0	1/1:24,0:24:6.51:183,7,0	0/1:9,0:8:2.55:12,0,3	0/0:15,0:14:30.06:0,30,315	0/0:21,0:19:48.08:0,48,568	0/0:10,0:10:26.94:0,27,325	1/1:16,0:16:8.25:74,8,0	0/1:18,0:15:57.07:61,0,57	1/1:24,0:22:12.37:161,12,0	0/1:10,0:8:0.55:17,0,1
chr10	43705840	.	GAAAGAC	G	1488.53	PASS	AB=0.900;AC=17;AF=0.304;AN=56;BaseQRankSum=3.071;DP=431;FS=0.651;HRun=0;HaplotypeScore=79.1983;InbreedingCoeff=0.4916;MQ=44.63;MQ0=65;MQRankSum=-3.013;QD=8.86;ReadPosRankSum=0.814;VQSLOD=1.8436;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:15,3:11:9.03:181,9,0	1/1:2,0:3:3.85:11,4,0	0/0:12,0:8:21.60:0,22,195	0/0:11,0:2:0.47:0,0,1	1/1:6,28:27:27.09:607,27,0	0/0:32,0:31:45.03:0,45,849	0/0:10,0:7:18.02:0,18,319	0/1:5,0:9:2.84:189,0,3	0/0:15,0:15:24.04:0,24,582	0/0:25,0:19:47.86:0,48,521	0/0:18,0:17:26.89:0,27,292	0/1:19,0:16:7.69:31,0,8	0/0:11,0:8:10:0,10,53	0/0:8,0:8:5.92:0,6,42	0/0:15,0:10:8.02:0,8,205	1/1:15,0:12:10.87:67,11,0	1/1:5,0:9:20.23:275,20,0	0/0:15,0:11:21.01:0,21,241	0/1:8,2:6:49.91:122,0,50	0/0:18,0:15:21.05:0,21,257	0/0:4,0:3:6.01:0,6,69	0/1:16,0:11:18.49:18,0,27	1/1:15,0:10:8.45:56,8,0	0/1:11,0:9:24.98:110,0,25	0/0:12,0:12:14.81:0,15,142	0/0:23,0:18:50.90:0,51,642	0/0:22,0:20:35.85:0,36,404	0/0:8,0:6:6.02:0,6,81
chr10	43705842	.	A	AAG	958.14	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=2.186;DP=442;FS=3.614;HRun=0;HaplotypeScore=67.7788;InbreedingCoeff=0.5651;MQ=47.26;MQ0=66;MQRankSum=-1.534;QD=5.60;ReadPosRankSum=-0.186;VQSLOD=2.4854;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:18,0:11:6.49:6,0,27	0/0:7,0:4:5.10:0,5,22	0/1:15,0:8:10.53:11,0,75	0/0:13,0:4:0.72:0,1,2	0/0:34,0:27:10.06:0,10,60	0/0:32,0:31:36.05:0,36,454	0/0:10,0:7:15.05:0,15,210	1/1:9,1:9:4.22:194,4,0	0/0:16,0:15:21:0,21,296	0/0:25,0:19:47.64:0,48,353	0/0:18,0:17:24.02:0,24,240	0/1:19,0:16:0.12:1,0,0	0/1:10,0:7:0.57:1,0,1	1/1:8,0:8:0.57:2,1,0	1/1:4,13:11:18.06:284,18,0	1/1:4,13:12:15.52:254,16,0	1/1:9,3:9:21.07:295,21,0	0/0:15,0:11:18.39:0,18,142	0/0:11,0:7:20.85:0,21,153	0/0:19,0:15:21:0,21,189	0/0:4,0:3:5.98:0,6,49	1/1:18,0:13:2.42:8,2,0	1/1:16,0:11:4.44:16,4,0	0/1:11,0:9:0.55:48,0,1	0/0:12,0:12:12.01:0,12,111	0/0:23,0:17:31.72:0,32,338	0/0:21,0:19:32.96:0,33,294	0/0:11,0:7:5.99:0,6,52
chr10	43705844	.	GAC	G	1718.13	PASS	AB=0.972;AC=26;AF=0.464;AN=56;BaseQRankSum=3.020;DP=453;FS=0.000;HRun=0;HaplotypeScore=65.8270;InbreedingCoeff=0.6798;MQ=46.88;MQ0=67;MQRankSum=-3.020;QD=8.07;ReadPosRankSum=-1.170;VQSLOD=2.6680;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:15,3:11:12.02:124,12,0	1/1:8,0:5:2.90:16,3,0	0/0:15,0:8:21.18:0,21,188	0/0:13,0:4:3.88:0,4,27	1/1:33,1:27:24.03:241,24,0	0/0:33,0:32:36.09:0,36,593	0/0:10,0:7:15.05:0,15,275	1/1:10,0:9:17.54:220,18,0	0/0:15,0:14:21.07:0,21,389	0/0:27,0:21:2.91:0,3,336	0/0:18,0:17:24:0,24,236	1/1:14,5:16:9.03:127,9,0	1/1:8,3:8:9.03:136,9,0	1/1:7,1:8:2.33:44,2,0	0/1:16,1:11:10.46:97,0,10	1/1:18,0:13:17.78:182,18,0	1/1:13,0:10:21.07:297,21,0	0/0:15,0:11:17.35:0,17,148	0/1:11,0:7:38.09:38,0,50	0/0:19,0:15:20.99:0,21,196	0/0:4,0:3:5.97:0,6,47	1/1:15,3:13:6.49:92,6,0	1/1:8,8:11:9.03:128,9,0	1/1:7,5:10:13.43:179,13,0	0/0:12,0:12:12.01:0,12,114	0/0:23,0:17:31.93:0,32,390	0/0:21,0:19:32.65:0,33,288	0/0:15,0:10:5.87:0,6,57
chr10	43705846	.	C	CAG	1774.21	PASS	AB=1.000;AC=26;AF=0.464;AN=56;BaseQRankSum=2.202;DP=460;FS=1.310;HRun=0;HaplotypeScore=67.3651;InbreedingCoeff=0.7291;MQ=46.43;MQ0=71;MQRankSum=-2.752;QD=8.06;ReadPosRankSum=-1.716;VQSLOD=3.0778;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,11:11:11.85:138,12,0	0/1:8,0:5:7.96:8,0,13	0/0:16,0:8:18.35:0,18,145	0/0:13,0:4:3.74:0,4,26	1/1:31,3:27:23.46:172,23,0	0/0:31,0:30:27.09:0,27,368	0/0:10,0:7:15.05:0,15,203	1/1:15,0:11:15.05:214,15,0	0/0:15,0:14:17.99:0,18,247	0/0:27,0:21:2.82:0,3,309	0/0:18,0:17:24.01:0,24,239	1/1:5,13:16:9.01:97,9,0	1/1:4,7:8:9.03:105,9,0	1/1:2,5:7:3.01:39,3,0	1/1:17,0:11:18.06:287,18,0	1/1:18,0:13:18.02:273,18,0	1/1:13,0:10:21.07:297,21,0	0/0:16,0:12:17.92:0,18,142	0/1:13,0:8:3.55:4,0,78	0/0:19,0:15:21:0,21,189	0/0:4,0:3:5.98:0,6,49	1/1:5,13:13:6.02:66,6,0	1/1:8,8:12:9:83,9,0	1/1:10,3:10:12.24:196,12,0	0/0:12,0:12:12.01:0,12,111	0/0:24,0:18:47.71:0,48,361	0/0:20,0:18:32.97:0,33,295	0/0:15,0:10:5.99:0,6,52
chr10	43705943	.	A	AC	1739.02	PASS	AB=0.630;AC=35;AF=0.761;AN=46;BaseQRankSum=-2.561;DP=347;FS=4.967;HRun=8;HaplotypeScore=43.5218;InbreedingCoeff=0.5916;MQ=39.65;MQ0=58;MQRankSum=1.031;QD=7.56;ReadPosRankSum=0.027;VQSLOD=0.2364;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,0:20:11.36:58,11,0	./.	0/0:16,0:4:8.97:0,9,72	./.	1/1:10,1:9:8.96:78,9,0	0/0:12,0:11:11.98:0,12,107	0/0:20,0:17:26.96:0,27,235	./.	0/0:14,0:14:27.01:0,27,243	1/1:4,6:5:6.02:69,6,0	1/1:1,7:5:3.01:35,3,0	1/1:4,13:16:15.04:165,15,0	1/1:5,3:8:3:35,3,0	1/1:5,8:11:8.99:90,9,0	1/1:3,5:8:7.26:72,7,0	1/1:5,12:16:8.98:89,9,0	0/1:7,10:14:12.42:123,0,12	1/1:2,9:10:12.04:138,12,0	1/1:9,5:8:9.03:104,9,0	1/1:0,9:7:8.98:89,9,0	1/1:2,11:11:12.04:138,12,0	1/1:2,8:9:12.04:138,12,0	./.	1/1:4,9:11:9.03:104,9,0	./.	1/1:6,9:15:30.03:334,30,0	1/1:3,9:10:3.01:35,3,0	0/0:7,5:10:2.99:0,3,24
chr10	43706769	.	C	CT	1748.80	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-9.017;DP=671;FS=26.572;HRun=5;HaplotypeScore=53.6710;InbreedingCoeff=0.8577;MQ=54.52;MQ0=33;MQRankSum=1.527;QD=27.33;ReadPosRankSum=2.199;VQSLOD=1.8014;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:35:87.19:0,87,924	0/0:9,0:9:24.06:0,24,258	0/0:21,0:3:4.82:0,5,37	0/0:12,0:1:3:0,3,27	0/0:28,0:26:51.11:0,51,539	0/0:24,0:24:51.13:0,51,548	0/0:23,0:22:45.08:0,45,474	0/0:33,0:18:42.09:0,42,443	0/0:25,0:25:66.17:0,66,709	0/0:39,0:37:99:0,99,1064	0/0:26,0:25:51.13:0,51,548	0/0:25,0:25:66.16:0,66,709	0/0:26,0:26:63.16:0,63,677	0/0:18,0:18:48.12:0,48,516	1/1:4,29:33:43:915,43,0	1/1:4,27:30:46.01:955,46,0	0/0:13,0:13:36.09:0,36,387	0/0:21,0:21:48.12:0,48,516	0/0:28,0:18:51.12:0,51,542	0/0:26,0:26:69.17:0,69,742	0/0:42,0:41:87.05:0,87,918	0/0:27,0:27:66.16:0,66,702	0/0:21,0:19:42.07:0,42,435	0/0:16,0:16:39.10:0,39,419	0/0:10,0:10:21.04:0,21,218	0/0:23,0:23:63.15:0,63,670	0/0:24,0:23:54.11:0,54,579	0/0:10,0:10:21.05:0,21,226
chr10	43706886	.	A	AC	9575.64	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-12.627;DP=706;FS=0.000;HRun=7;HaplotypeScore=112.3042;InbreedingCoeff=0.9935;MQ=77.04;MQ0=1;MQRankSum=-2.985;QD=27.05;ReadPosRankSum=0.002;VQSLOD=3.9919;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,30:37:75.23:906,75,0	0/0:10,0:10:27.04:0,27,261	0/0:27,0:25:60.02:0,60,554	0/0:26,0:23:57.08:0,57,547	1/1:4,28:32:63.19:754,63,0	0/0:21,0:21:60.08:0,60,574	0/0:27,0:27:78.10:0,78,745	1/1:8,23:31:66.19:785,66,0	0/0:18,0:18:48.07:0,48,463	1/1:2,23:25:69.21:833,69,0	1/1:0,24:24:63.19:761,63,0	0/0:27,0:27:69.11:0,69,666	0/0:20,0:20:54.08:0,54,521	0/0:23,0:23:48.06:0,48,463	0/0:33,0:33:81.11:0,81,776	0/0:20,0:20:48.07:0,48,464	0/0:33,0:33:78.11:0,78,753	1/1:3,22:25:63.19:761,63,0	1/1:6,16:22:51.16:615,51,0	1/1:2,17:19:10.21:406,10,0	1/1:12,34:46:90.28:1087,90,0	0/0:27,0:27:66.10:0,66,637	0/0:19,0:19:39.06:0,39,376	0/0:21,0:21:51.08:0,51,492	1/1:0,20:20:39.12:471,39,0	1/1:0,24:23:72.20:856,72,0	1/1:7,30:36:78.24:942,78,0	1/1:0,12:12:33.10:399,33,0
chr10	43706909	.	AC	A	9433.83	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-2.147;DP=726;FS=1.647;HRun=1;HaplotypeScore=129.6525;InbreedingCoeff=0.9987;MQ=91.31;MQ0=0;MQRankSum=-2.333;QD=37.89;ReadPosRankSum=4.154;VQSLOD=4.4791;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,99,1579	1/1:0,12:12:33.11:461,33,0	0/0:34,0:34:99:0,99,1556	0/0:26,0:26:75.25:0,75,1196	0/0:33,0:33:84.29:0,84,1335	0/0:19,0:19:54.18:0,54,863	0/0:29,0:29:87.27:0,87,1350	0/0:30,0:30:90.30:0,90,1415	0/0:23,0:23:69.24:0,69,1103	0/0:25,0:25:75.25:0,75,1174	0/0:31,0:31:84.28:0,84,1321	1/1:0,29:29:78.26:1091,78,0	1/1:0,29:29:81.27:1132,81,0	1/1:0,20:20:54.18:755,54,0	1/1:0,36:36:99:1511,108,0	1/1:1,25:26:18.25:833,18,0	1/1:0,29:29:84.28:1175,84,0	0/0:23,0:23:66.20:0,66,1023	0/0:21,0:21:63.21:0,63,1006	0/0:24,0:24:63.16:0,63,958	0/0:36,0:36:99:0,102,1600	1/1:0,32:32:78.26:1091,78,0	1/1:0,20:20:54.18:755,54,0	1/1:0,16:16:45.15:629,45,0	0/0:16,0:16:33.11:0,33,528	0/0:28,0:27:84.29:0,84,1340	0/0:32,0:31:84.29:0,84,1342	0/0:13,0:13:33.11:0,33,527
chr10	43707455	.	TTATGTGTG	T	2928.67	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.604;DP=703;FS=0.588;HRun=0;HaplotypeScore=185.6511;InbreedingCoeff=0.9914;MQ=68.71;MQ0=1;MQRankSum=-10.007;QD=45.76;ReadPosRankSum=-0.294;VQSLOD=3.4712;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,46:48:99:2803,108,0	0/0:13,0:13:36.12:0,36,1535	0/0:23,0:23:63.20:0,63,2342	0/0:16,0:15:36.12:0,36,1263	1/1:3,13:16:14.96:244,15,0	0/0:21,0:21:57.18:0,57,2127	0/0:32,0:32:87.30:0,87,3572	0/0:30,0:30:78.27:0,78,3018	0/0:28,0:28:63.20:0,63,2531	0/0:34,0:34:99:0,99,3775	0/0:18,0:18:54.19:0,54,2305	0/0:35,0:35:99:0,105,4226	0/0:15,0:15:45.15:0,45,1866	0/0:21,0:21:57.20:0,57,2268	0/0:24,0:24:63.22:0,63,2711	0/0:34,0:34:99:0,99,4239	0/0:25,0:25:72.25:0,72,2834	0/0:18,0:18:51.18:0,51,2024	0/0:26,0:26:66.23:0,66,2416	0/0:33,0:33:84.29:0,84,3247	0/0:25,0:25:69.22:0,69,2444	0/0:27,0:27:78.27:0,78,3112	0/0:24,0:24:66.23:0,66,2744	0/0:22,0:22:54.18:0,54,2230	0/0:19,0:19:48.16:0,48,1886	0/0:34,0:34:93.32:0,93,3897	0/0:30,0:30:87.28:0,87,3612	0/0:12,0:12:36.12:0,36,1520
chr10	43707943	.	TTG	T	1964.33	PASS	AB=0.976;AC=27;AF=0.482;AN=56;BaseQRankSum=9.762;DP=575;FS=49.549;HRun=0;HaplotypeScore=145.5356;InbreedingCoeff=-0.0699;MQ=51.11;MQ0=15;MQRankSum=-9.947;QD=4.96;ReadPosRankSum=1.533;VQSLOD=1.5064;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:20,1:21:15.16:15,0,366	0/1:13,0:13:19.05:19,0,41	0/0:35,0:13:28.25:0,28,242	0/0:38,0:14:14.49:0,14,134	0/0:34,0:32:16.56:0,17,530	0/1:18,0:18:51.03:51,0,233	0/0:13,0:12:12.44:0,12,163	0/1:16,1:17:49.48:49,0,160	0/1:10,1:11:67.58:69,0,68	0/1:27,0:26:24.96:25,0,104	0/1:26,1:25:50.35:106,0,50	1/1:12,2:14:31.52:273,32,0	1/1:19,0:19:12:111,12,0	1/1:14,0:13:32.83:278,33,0	0/1:19,0:19:36.38:36,0,116	0/1:23,1:24:36.17:36,0,211	0/0:28,0:28:9.72:0,10,116	0/1:23,0:20:0.38:0,0,181	0/1:13,0:11:18.38:18,0,88	0/1:25,2:25:28.60:120,0,29	0/0:18,0:14:20.85:0,21,169	1/1:17,0:16:14.39:266,14,0	1/1:9,1:8:20.94:201,21,0	1/1:16,1:16:37.93:348,38,0	0/1:16,0:16:47.92:48,0,81	0/1:26,1:27:26.85:27,0,90	0/1:22,0:22:34.51:49,0,35	0/0:13,0:13:6.87:0,7,171
chr10	43707945	.	GTT	G	3558.45	PASS	AB=0.912;AC=37;AF=0.661;AN=56;BaseQRankSum=2.896;DP=573;FS=10.588;HRun=18;HaplotypeScore=144.1228;InbreedingCoeff=0.2219;MQ=49.58;MQ0=15;MQRankSum=-4.952;QD=8.24;ReadPosRankSum=7.586;VQSLOD=-0.6625;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,1:20:6.59:0,7,207	1/1:3,10:13:31.01:228,31,0	0/0:37,0:14:8.13:0,8,46	0/0:39,0:14:13.13:0,13,93	0/0:30,0:30:43.04:0,43,510	0/1:14,1:18:30.79:31,0,90	0/0:8,1:11:20.62:0,21,97	0/1:14,1:18:20.90:21,0,59	0/1:7,2:11:17.13:54,0,17	1/1:6,19:25:43.49:371,43,0	1/1:9,15:23:43.55:312,44,0	0/1:13,0:13:8.21:24,0,8	1/1:20,0:20:7.46:29,7,0	0/1:14,0:13:22.93:41,0,23	1/1:11,0:19:16.38:90,16,0	0/1:18,0:24:59.26:59,0,63	1/1:5,22:27:59.37:446,59,0	1/1:14,8:19:22.86:178,23,0	1/1:6,6:11:17.45:134,17,0	1/1:8,19:25:59.26:445,59,0	1/1:10,7:13:6.76:49,7,0	0/1:17,0:16:13.89:14,0,71	0/1:11,0:9:13.82:14,0,21	0/1:17,0:16:13.30:47,0,13	1/1:8,6:16:3.89:130,4,0	1/1:9,19:29:28.92:374,29,0	1/1:5,16:22:47.69:400,48,0	1/1:9,3:13:9.24:68,9,0
chr10	43707970	.	CA	C	6999.99	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-4.661;DP=482;FS=4.084;HRun=2;HaplotypeScore=127.5330;InbreedingCoeff=0.9527;MQ=62.43;MQ0=3;MQRankSum=-8.711;QD=33.98;ReadPosRankSum=-0.921;VQSLOD=4.0158;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:48.13:0,48,661	0/0:12,0:12:36.11:0,36,508	0/0:32,0:20:19.05:0,19,401	0/0:34,1:15:10.51:0,11,180	0/0:22,0:20:46.57:0,47,770	0/0:9,0:9:27.09:0,27,400	0/0:9,0:8:21.05:0,21,294	1/1:1,23:24:72.16:886,72,0	0/0:7,0:7:21.07:0,21,308	1/1:0,30:29:87.28:1119,87,0	1/1:3,18:20:60.13:719,60,0	0/0:4,0:5:10.68:0,11,108	0/0:13,0:13:3.39:0,3,242	0/0:13,0:12:21.83:0,22,361	0/0:16,0:16:44.83:0,45,567	0/0:18,0:18:51.17:0,51,758	0/0:26,0:26:75.24:0,75,1096	1/1:0,13:12:33.06:407,33,0	1/1:1,16:17:48.16:622,48,0	1/1:1,26:26:66.21:853,66,0	1/1:2,7:5:12.04:155,12,0	0/0:16,0:15:32.91:0,33,428	0/0:11,0:11:24.07:0,24,329	0/0:11,0:10:26.47:0,26,314	1/1:1,10:12:36.09:436,36,0	1/1:4,22:26:69.22:883,69,0	1/1:2,19:22:63.01:765,63,0	1/1:0,4:4:12.04:155,12,0
chr10	43709337	.	G	GC	822.95	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=1.834;DP=486;FS=4.592;HRun=7;HaplotypeScore=69.8644;InbreedingCoeff=0.6909;MQ=79.65;MQ0=5;MQRankSum=-1.336;QD=11.59;ReadPosRankSum=-3.739;VQSLOD=1.8667;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,99,951	0/0:5,0:5:6.01:0,6,58	0/1:40,0:26:18.45:18,0,201	0/0:33,1:24:42.75:0,43,348	0/0:13,0:13:30.04:0,30,290	0/0:16,0:16:45.03:0,45,419	0/0:17,0:17:39.06:0,39,377	0/0:26,0:26:56.92:0,57,524	0/0:15,0:15:39.05:0,39,372	0/0:15,0:15:39.05:0,39,373	0/0:16,0:16:41.86:0,42,372	0/0:16,0:16:42.05:0,42,397	0/0:5,0:5:12.02:0,12,116	0/0:7,0:7:18.01:0,18,168	1/1:4,10:14:36.09:413,36,0	1/1:6,11:17:48.06:520,48,0	0/0:30,0:30:75.08:0,75,711	0/0:19,0:19:45.02:0,45,425	0/0:21,0:22:47.07:0,47,433	0/0:15,0:15:42.06:0,42,405	0/0:20,0:20:48.03:0,48,448	0/0:9,0:9:12:0,12,112	0/0:11,0:11:33.03:0,33,308	0/0:5,0:5:6.01:0,6,58	0/0:8,0:8:18.01:0,18,167	0/0:22,0:22:60.07:0,60,572	0/0:22,0:22:51.04:0,51,480	0/0:10,0:10:23.25:0,23,210
chr10	43709353	.	C	CT	989.91	PASS	AB=0.946;AC=9;AF=0.161;AN=56;BaseQRankSum=0.415;DP=470;FS=1.849;HRun=11;HaplotypeScore=67.0221;InbreedingCoeff=0.8000;MQ=77.08;MQ0=7;MQRankSum=-1.647;QD=9.25;ReadPosRankSum=0.198;VQSLOD=2.5964;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:83.57:0,84,644	1/1:1,6:7:15.03:152,15,0	0/0:40,0:22:9.19:0,9,120	0/1:32,2:25:7.05:7,0,111	0/0:17,0:17:30.50:0,30,290	0/0:18,0:18:47.81:0,48,371	0/0:14,0:14:28.92:0,29,215	0/0:26,0:26:47.71:0,48,368	0/0:16,0:16:38.82:0,39,299	0/0:14,0:14:35.84:0,36,276	0/0:12,0:12:26.79:0,27,199	0/0:14,0:14:30.75:0,31,231	0/0:5,0:5:14.94:0,15,116	0/0:7,0:7:9.43:0,9,71	1/1:5,2:15:25.67:132,26,0	1/1:4,2:12:25.96:154,26,0	1/1:9,28:38:32.44:705,32,0	0/0:17,0:17:44.79:0,45,344	0/0:18,0:19:42.87:0,43,313	0/0:16,0:16:32.85:0,33,253	0/0:11,0:12:25.89:0,26,187	0/0:6,0:6:11.91:0,12,87	0/0:12,0:13:37.90:0,38,284	0/0:2,0:2:2.99:0,3,23	0/0:7,0:7:11.92:0,12,93	0/0:21,0:22:55.82:0,56,424	0/0:20,0:20:44.80:0,45,346	0/0:8,0:8:23.90:0,24,184
chr10	43730671	.	A	AT	8524.88	PASS	AB=1.000;AC=51;AF=0.944;AN=54;BaseQRankSum=-2.414;DP=226;FS=0.000;HRun=2;HaplotypeScore=22.3602;InbreedingCoeff=0.2737;MQ=55.48;MQ0=3;MQRankSum=-2.438;QD=38.23;ReadPosRankSum=1.288;VQSLOD=4.2540;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,11:11:21.07:302,21,0	1/1:0,3:3:9.03:129,9,0	0/1:6,0:3:13.38:39,0,13	0/0:3,0:1:3:0,3,26	1/1:1,8:9:27.09:388,27,0	1/1:0,11:10:30.10:430,30,0	1/1:0,4:4:12.04:172,12,0	1/1:1,24:25:72.08:926,72,0	1/1:0,6:6:18.06:258,18,0	1/1:0,5:5:15.04:194,15,0	1/1:1,10:11:33.11:472,33,0	1/1:1,9:10:27.09:388,27,0	1/1:0,3:3:6.02:86,6,0	1/1:0,5:5:15.05:215,15,0	1/1:0,4:4:12.04:172,12,0	1/1:0,5:5:15.05:216,15,0	1/1:0,18:18:48.16:689,48,0	1/1:1,14:15:39.13:560,39,0	1/1:1,7:8:21.03:262,21,0	1/1:1,8:9:27.09:387,27,0	1/1:0,1:1:3.01:43,3,0	./.	1/1:1,1:2:3.01:43,3,0	1/1:0,2:2:6.02:86,6,0	1/1:0,20:20:54.18:776,54,0	1/1:0,11:11:33.11:475,33,0	1/1:0,12:12:36.12:516,36,0	1/1:0,7:7:21.07:301,21,0
chr10	43731797	.	T	TA	203.69	PASS	AB=1.000;AC=5;AF=0.093;AN=54;BaseQRankSum=-2.001;DP=363;FS=0.000;HRun=8;HaplotypeScore=38.7838;InbreedingCoeff=0.6234;MQ=79.60;MQ0=2;MQRankSum=0.726;QD=4.43;ReadPosRankSum=0.505;VQSLOD=-0.7282;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:77.93:0,78,692	./.	0/1:35,0:14:9.82:10,0,96	0/0:29,0:18:12.59:0,13,68	0/0:14,0:14:22.10:0,22,310	0/0:19,0:19:47.98:0,48,426	0/0:6,0:6:14.97:0,15,130	0/0:20,0:20:44.97:0,45,395	0/0:7,0:7:20.99:0,21,185	0/0:15,0:15:30:0,30,272	0/0:16,0:16:42:0,42,378	0/0:8,0:8:21.01:0,21,192	0/0:6,0:6:18:0,18,159	0/0:5,0:5:8.99:0,9,79	1/1:1,7:8:18.05:208,18,0	1/1:0,3:3:9.03:104,9,0	0/0:19,0:19:56.97:0,57,506	0/0:14,0:14:35.92:0,36,313	0/0:35,0:33:83.97:0,84,742	0/0:5,0:5:9:0,9,82	0/0:7,0:7:20.99:0,21,184	0/0:2,0:2:5.99:0,6,51	0/0:2,0:2:6:0,6,54	0/0:5,0:5:8.98:0,9,79	0/0:14,0:14:35.94:0,36,308	0/0:17,0:17:42:0,42,375	0/0:14,0:14:26.99:0,27,242	0/0:8,0:8:24.01:0,24,219
chr10	43732088	.	G	GCATT	3055.19	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-7.976;DP=616;FS=0.000;HRun=0;HaplotypeScore=93.1091;InbreedingCoeff=0.9955;MQ=59.70;MQ0=3;MQRankSum=-0.051;QD=61.10;ReadPosRankSum=1.605;VQSLOD=5.4943;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,111,2028	0/0:7,0:7:21.07:0,21,392	0/0:21,0:17:46.94:0,47,780	0/0:28,0:19:42.12:0,42,731	0/0:22,0:22:63.22:0,63,1175	0/0:21,0:21:57.18:0,57,1032	0/0:26,0:26:60.16:0,60,1084	0/0:26,0:26:72.24:0,72,1314	0/0:21,0:21:57.20:0,57,1058	0/0:28,0:28:81.27:0,81,1479	0/0:8,0:8:21.07:0,21,383	0/0:19,0:19:54.17:0,54,976	0/0:23,0:23:63.20:0,63,1138	0/0:25,0:25:72.25:0,72,1338	1/1:5,25:30:72.16:1800,72,0	1/1:4,15:20:54.15:1377,54,0	0/0:42,0:42:99:0,117,2167	0/0:17,0:17:48.16:0,48,895	0/0:19,0:18:54.17:0,54,978	0/0:13,0:13:33.10:0,33,585	0/0:30,0:30:84.27:0,84,1535	0/0:14,0:13:39.13:0,39,728	0/0:11,0:11:33.11:0,33,616	0/0:18,0:18:48.16:0,48,896	0/0:17,0:17:51.17:0,51,946	0/0:21,0:21:57.20:0,57,1064	0/0:30,0:30:87.28:0,87,1593	0/0:16,0:16:39.13:0,39,686
chr10	43733235	.	C	CT	1564.71	PASS	AB=0.893;AC=27;AF=0.482;AN=56;BaseQRankSum=6.491;DP=485;FS=14.475;HRun=14;HaplotypeScore=88.3291;InbreedingCoeff=0.6762;MQ=55.75;MQ0=31;MQRankSum=-7.093;QD=6.39;ReadPosRankSum=-5.473;VQSLOD=-0.4383;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:40,3:40:20.80:0,21,376	0/0:10,0:10:17.09:0,17,104	0/0:6,0:5:5.74:0,6,32	0/1:3,0:3:0:0,0,0	0/0:24,0:24:1.70:0,2,169	0/0:29,0:32:0.46:0,0,170	0/0:6,0:6:11.78:0,12,76	1/1:15,11:22:10.53:196,11,0	0/0:17,0:15:13.75:0,14,94	1/1:18,0:23:39.30:233,39,0	1/1:7,0:12:16.81:89,17,0	0/0:20,0:20:19.39:0,19,116	0/1:11,1:12:1.82:2,0,50	0/0:20,1:21:19.43:0,19,113	1/1:8,12:19:14.42:226,14,0	0/1:14,7:21:21.38:187,0,21	0/0:26,1:21:0.24:0,0,158	1/1:6,0:9:11.36:57,11,0	1/1:13,0:14:18.39:108,18,0	1/1:18,0:21:30.45:170,30,0	1/1:6,0:9:8.52:43,9,0	0/0:10,0:10:8.84:0,9,58	0/0:7,0:6:6.72:0,7,39	0/0:12,0:9:11.75:0,12,77	1/1:15,0:21:29.05:165,29,0	1/1:20,0:20:31.28:173,31,0	1/1:13,0:17:12.86:71,13,0	1/1:4,0:5:8.52:43,9,0
chr10	43733558	.	T	TC	1485.76	PASS	AB=0.962;AC=44;AF=0.815;AN=54;BaseQRankSum=1.256;DP=337;FS=0.888;HRun=0;HaplotypeScore=102.7775;InbreedingCoeff=0.1290;MQ=72.72;MQ0=0;MQRankSum=8.986;QD=4.59;ReadPosRankSum=-3.019;VQSLOD=2.8606;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:12:5.10:41,5,0	1/1:5,0:5:0.64:18,1,0	1/1:2,3:5:10.16:69,10,0	0/1:11,4:17:12.11:102,0,12	1/1:15,0:15:3.12:47,3,0	0/1:11,0:11:5.56:48,0,6	0/1:16,0:16:11.50:74,0,12	1/1:18,0:17:15.93:125,16,0	1/1:14,0:14:8.57:54,9,0	1/1:12,0:12:9.75:67,10,0	0/1:10,0:10:0.12:18,0,0	1/1:14,0:14:8:69,8,0	1/1:10,0:10:12.09:85,12,0	1/1:12,0:12:9.59:61,10,0	1/1:10,0:10:16.02:70,16,0	1/1:7,0:7:6.38:30,6,0	1/1:24,0:24:16.95:139,17,0	1/1:17,0:15:4.02:27,4,0	1/1:11,0:11:17.52:108,18,0	0/1:8,0:8:1.21:1,0,7	1/1:18,0:18:10.21:76,10,0	0/0:2,0:2:1.82:0,2,5	0/1:8,0:8:1.29:1,0,1	1/1:25,0:25:5.47:100,5,0	0/0:6,0:6:0.47:0,0,1	1/1:11,0:11:11.56:57,12,0	1/1:13,0:13:11.12:102,11,0	./.
chr10	43734609	.	GAC	G	1467.65	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.718;DP=694;FS=6.185;HRun=0;HaplotypeScore=89.3586;InbreedingCoeff=0.9987;MQ=80.76;MQ0=0;MQRankSum=-1.990;QD=30.58;ReadPosRankSum=-0.051;VQSLOD=4.9312;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,160,2835	1/1:0,12:12:29.87:429,30,0	0/0:23,0:23:28.80:0,29,868	0/0:12,0:12:26.93:0,27,345	0/0:18,0:18:45.15:0,45,825	0/0:17,0:17:48.16:0,48,872	0/0:25,0:25:72.72:0,73,1315	0/0:31,0:31:78.27:0,78,1426	0/0:30,0:30:84.29:0,84,1533	0/0:17,0:17:48.16:0,48,867	0/0:16,0:16:45.15:0,45,807	0/0:33,0:33:93.32:0,93,1695	0/0:16,0:16:42.14:0,42,762	0/0:18,0:18:51.17:0,51,935	0/0:34,0:34:90.31:0,90,1635	0/0:22,0:22:66.23:0,66,1205	1/1:5,31:36:81.27:1160,81,0	0/0:32,0:32:90.27:0,90,1615	0/0:25,0:25:75.25:0,75,1345	0/0:16,0:16:48.16:0,48,880	0/0:46,0:46:99:0,132,2380	0/0:26,0:26:75.26:0,75,1358	0/0:20,0:20:60.21:0,60,1093	0/0:13,0:13:39.13:0,39,715	0/0:20,0:20:51.17:0,51,935	0/0:32,0:32:93.32:0,93,1699	0/0:23,0:23:66.23:0,66,1202	0/0:26,0:26:78.23:0,78,1394
chr10	43736929	.	GCA	G	653.98	PASS	AB=0.792;AC=4;AF=0.071;AN=56;BaseQRankSum=3.971;DP=512;FS=5.522;HRun=0;HaplotypeScore=85.8378;InbreedingCoeff=0.4330;MQ=68.43;MQ0=1;MQRankSum=0.928;QD=14.86;ReadPosRankSum=1.242;VQSLOD=3.1040;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:63.20:0,63,1036	0/1:2,5:7:33.24:179,0,33	0/1:18,0:11:38.74:39,0,135	0/0:37,0:31:41.33:0,41,461	0/0:19,0:19:40.02:0,40,655	0/0:10,0:10:27:0,27,386	0/0:19,0:19:48.16:0,48,780	0/0:30,0:30:81.26:0,81,1341	0/0:18,0:18:48.16:0,48,777	0/0:23,0:23:66.18:0,66,1084	0/0:21,0:21:54.18:0,54,908	0/0:25,0:25:60.15:0,60,933	0/0:17,0:17:39.13:0,39,667	0/0:26,0:26:66.22:0,66,1073	0/0:19,0:19:48.16:0,48,806	0/0:21,0:21:54.18:0,54,896	1/1:3,16:18:42.14:552,42,0	0/0:12,0:12:30.08:0,30,458	0/0:14,0:14:30.08:0,30,484	0/0:15,0:15:39.13:0,39,668	0/0:23,0:23:57.19:0,57,963	0/0:14,0:14:33.11:0,33,564	0/0:16,0:16:42.14:0,42,718	0/0:19,0:19:42.14:0,42,676	0/0:14,0:14:36.12:0,36,603	0/0:14,0:14:36.12:0,36,616	0/0:11,0:11:30.10:0,30,511	0/0:3,0:3:6.02:0,6,103
chr10	43737754	.	A	AC	1654.57	PASS	AB=0.833;AC=23;AF=0.426;AN=54;BaseQRankSum=-4.159;DP=288;FS=10.232;HRun=1;HaplotypeScore=47.6594;InbreedingCoeff=0.7523;MQ=65.21;MQ0=5;MQRankSum=0.184;QD=13.34;ReadPosRankSum=-0.233;VQSLOD=1.2681;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:15:29.72:0,30,219	0/0:1,0:1:2.68:0,3,11	0/0:33,0:19:33.89:0,34,311	0/0:30,0:13:24.24:0,24,210	0/0:8,0:8:15:0,15,134	0/0:11,0:11:14.84:0,15,107	0/0:12,0:11:23.76:0,24,170	1/1:1,15:16:38.61:291,39,0	0/0:5,0:5:8.96:0,9,73	1/1:11,0:11:11.92:98,12,0	1/1:5,1:6:11.92:90,12,0	0/0:4,0:4:8.77:0,9,52	0/0:1,0:2:2.04:0,2,6	0/0:5,0:5:12.18:0,12,72	1/1:12,0:12:23.78:189,24,0	1/1:4,2:5:0.48:59,0,0	0/0:24,0:22:44.06:0,44,297	1/1:9,1:10:20.74:170,21,0	1/1:2,16:17:44.75:356,45,0	0/0:1,3:4:0:0,0,0	1/1:8,0:8:14.89:110,15,0	./.	0/0:6,0:6:11.87:0,12,60	0/0:4,0:4:8.29:0,8,41	1/1:3,0:3:8.14:48,8,0	0/1:8,1:10:0.21:156,0,0	1/1:13,0:12:27:231,27,0	1/1:5,2:11:0.23:49,0,0
chr10	43737942	.	T	TA	1837.52	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-6.128;DP=491;FS=8.800;HRun=9;HaplotypeScore=53.9728;InbreedingCoeff=0.9824;MQ=61.58;MQ0=0;MQRankSum=3.535;QD=22.14;ReadPosRankSum=2.553;VQSLOD=4.3699;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:62.98:0,63,547	0/0:6,0:6:18:0,18,156	0/0:14,0:12:13.77:0,14,94	0/0:11,0:10:11.93:0,12,98	0/0:18,0:17:44.98:0,45,390	0/0:17,0:17:50.99:0,51,443	0/0:18,0:18:41.90:0,42,353	0/0:32,0:32:80.96:0,81,699	0/0:16,0:16:47.99:0,48,417	0/0:22,0:21:62.98:0,63,544	0/0:22,0:21:53.98:0,54,466	1/1:0,15:15:39.11:431,39,0	1/1:1,11:12:24.06:265,24,0	1/1:1,13:14:33.09:365,33,0	0/0:19,0:19:50.97:0,51,439	0/0:20,0:19:44.97:0,45,390	0/0:32,0:31:77.92:0,78,667	0/0:17,0:17:41.99:0,42,364	0/0:13,0:12:29.97:0,30,256	0/0:13,0:13:38.99:0,39,338	0/0:10,0:10:26.97:0,27,228	1/1:3,11:14:33.09:365,33,0	1/1:2,9:10:18.05:199,18,0	1/1:2,15:17:16.05:398,16,0	0/0:27,0:27:71.98:0,72,622	0/0:25,0:25:68.95:0,69,592	0/0:20,0:21:42.19:0,42,477	0/0:10,0:10:26.99:0,27,234
chr10	43739527	.	TC	T	1482.80	PASS	AB=0.914;AC=15;AF=0.268;AN=56;BaseQRankSum=5.353;DP=559;FS=31.649;HRun=10;HaplotypeScore=69.0318;InbreedingCoeff=0.5777;MQ=70.03;MQ0=4;MQRankSum=-0.280;QD=8.38;ReadPosRankSum=4.499;VQSLOD=0.1391;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,1:31:31.02:0,31,521	0/0:6,0:6:7.34:0,7,51	0/0:29,0:18:35.38:0,35,323	0/0:28,0:17:5.78:0,6,176	0/0:11,0:11:18.02:0,18,182	0/0:18,1:19:19:0,19,401	0/0:28,0:28:72.14:0,72,756	0/0:19,0:19:20.14:0,20,148	0/0:21,0:21:47.67:0,48,475	0/0:13,1:14:7.01:0,7,291	0/0:13,1:14:18.01:0,18,168	1/1:8,20:28:50.96:442,51,0	1/1:5,14:19:32.98:286,33,0	1/1:7,14:21:38.62:337,39,0	0/1:19,0:20:7.19:7,0,72	0/0:23,0:22:11.11:0,11,41	0/0:22,0:22:36.99:0,37,274	0/0:20,1:20:28.09:0,28,530	0/1:14,2:16:13.01:13,0,311	0/0:16,0:16:27:0,27,249	0/0:36,1:36:57.70:0,58,797	1/1:7,15:22:35.89:303,36,0	0/1:10,2:12:7.88:8,0,132	1/1:6,10:16:29.98:260,30,0	0/0:10,0:10:24.04:0,24,243	0/1:14,1:15:2.01:2,0,186	0/0:31,1:32:55.04:0,55,763	0/1:7,1:8:2.02:2,0,186
chr10	43739537	.	C	CCTCTGTG	1173.88	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=6.126;DP=593;FS=8.306;HRun=0;HaplotypeScore=161.6795;InbreedingCoeff=0.7921;MQ=65.97;MQ0=4;MQRankSum=-0.026;QD=13.19;ReadPosRankSum=-4.240;VQSLOD=0.8042;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:47.96:0,48,874	1/1:4,0:4:6.45:49,6,0	0/0:34,0:19:38.64:0,39,540	0/0:38,0:22:27.49:0,27,447	0/0:11,0:11:23.90:0,24,430	0/0:21,0:21:51.11:0,51,1002	0/0:29,0:29:66.09:0,66,1313	0/0:14,0:14:18.08:0,18,370	0/0:18,0:18:39.06:0,39,818	0/0:20,0:20:46.33:0,46,928	0/0:16,0:16:16.21:0,16,278	0/0:30,0:30:21.50:0,22,779	0/0:15,0:15:24.11:0,24,525	0/0:19,0:19:21.32:0,21,604	1/1:15,0:27:36.03:525,36,0	1/1:7,11:31:27.56:733,28,0	0/1:26,0:25:4.96:5,0,489	0/0:23,0:22:58.43:0,58,1244	0/0:21,0:21:50.40:0,50,753	0/0:14,0:14:20.90:0,21,308	0/0:41,0:40:75.37:0,75,1694	0/0:24,0:24:19.56:0,20,575	0/0:10,0:10:8.13:0,8,229	0/0:13,0:13:23.24:0,23,533	0/0:10,0:10:24:0,24,417	0/0:13,0:13:11.52:0,12,475	0/0:36,0:36:81.19:0,81,1619	0/0:10,0:10:16.86:0,17,344
chr10	43740142	.	TTA	T	1120.58	PASS	AB=0.773;AC=4;AF=0.071;AN=56;BaseQRankSum=-3.970;DP=388;FS=22.189;HRun=0;HaplotypeScore=78.5581;InbreedingCoeff=0.3076;MQ=64.25;MQ0=2;MQRankSum=-2.409;QD=21.55;ReadPosRankSum=-3.324;VQSLOD=1.2734;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:42.01:0,42,390	0/1:9,0:9:41.88:42,0,112	0/0:9,0:4:9.87:0,10,77	0/0:4,0:4:8.75:0,9,79	0/0:19,0:19:24.90:0,25,463	0/0:15,0:15:45.14:0,45,709	0/0:11,0:11:29.98:0,30,347	0/0:33,0:33:85.02:0,85,857	0/0:7,0:7:18.05:0,18,258	0/0:14,0:14:41.22:0,41,392	0/0:14,0:14:41.14:0,41,303	0/0:10,0:10:10.08:0,10,154	0/0:14,0:14:25.55:0,26,372	0/0:8,0:8:9.21:0,9,141	1/1:3,22:25:50.96:700,51,0	0/1:3,15:18:10.32:492,0,10	0/0:27,0:27:6.73:0,7,619	0/0:16,0:16:30.15:0,30,284	0/0:11,0:12:5.88:0,6,208	0/0:17,0:16:42.84:0,43,361	0/0:7,0:7:14.98:0,15,132	0/0:5,0:5:5.02:0,5,76	0/0:7,0:6:9.08:0,9,155	0/0:8,0:8:0.88:0,1,140	0/0:11,0:11:26.99:0,27,249	0/0:20,0:20:59.67:0,60,570	0/0:18,0:18:30.03:0,30,280	0/0:10,0:10:24.03:0,24,235
chr10	43740143	.	TA	T	569.68	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-3.038;DP=396;FS=15.979;HRun=1;HaplotypeScore=75.2970;InbreedingCoeff=0.7542;MQ=63.92;MQ0=2;MQRankSum=-0.864;QD=13.25;ReadPosRankSum=-0.475;VQSLOD=1.2025;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:41.26:0,41,263	0/0:9,0:9:18.68:0,19,118	0/0:10,0:4:9.87:0,10,77	0/0:4,0:4:8.44:0,8,54	0/0:20,0:20:44.27:0,44,355	0/0:15,0:15:45.13:0,45,554	0/0:10,0:10:30.04:0,30,315	0/0:33,1:34:86.88:0,87,783	0/0:7,0:7:18.03:0,18,200	0/0:14,0:14:38.06:0,38,332	0/0:15,0:15:27.94:0,28,238	0/0:11,0:11:17.73:0,18,143	0/0:14,0:14:35.80:0,36,312	0/0:8,0:8:14.91:0,15,129	1/1:23,2:25:50.30:420,50,0	1/1:16,2:18:0.38:255,0,0	0/0:27,0:27:67.31:0,67,569	0/0:16,0:16:25.36:0,25,252	0/0:14,0:14:20.73:0,21,227	0/0:17,0:16:26.56:0,27,275	0/0:7,0:7:14.91:0,15,122	0/0:5,0:5:14.73:0,15,102	0/0:7,0:6:14.92:0,15,133	0/0:8,0:8:20.36:0,20,155	0/0:11,0:11:26.39:0,26,235	0/0:21,0:21:58.64:0,59,510	0/0:18,0:18:30:0,30,270	0/0:10,0:10:24.01:0,24,218
chr10	43740144	.	A	AT	2572.28	PASS	AB=1.000;AC=45;AF=0.804;AN=56;BaseQRankSum=6.075;DP=397;FS=2.805;HRun=12;HaplotypeScore=72.1146;InbreedingCoeff=0.7255;MQ=62.68;MQ0=2;MQRankSum=-2.249;QD=7.27;ReadPosRankSum=3.295;VQSLOD=2.5893;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,18:22:35.89:335,36,0	1/1:9,0:9:20.29:112,20,0	0/0:9,0:3:0.88:0,1,2	0/0:4,0:4:5.52:0,6,25	1/1:4,17:22:20.10:343,20,0	0/0:14,0:14:41.76:0,42,306	0/0:9,0:9:20.85:0,21,153	1/1:33,0:33:54.06:261,54,0	0/0:7,0:7:11.92:0,12,87	1/1:13,0:13:14.37:80,14,0	1/1:17,0:17:3.36:37,3,0	1/1:12,0:12:14.67:58,15,0	1/1:14,0:14:28.70:128,29,0	1/1:8,0:8:10.05:41,10,0	1/1:25,0:25:15.01:66,15,0	0/1:18,0:18:4.16:4,0,10	1/1:28,0:28:66.79:370,67,0	1/1:16,0:16:19.53:99,20,0	1/1:13,0:14:7.87:67,8,0	1/1:15,0:15:6.23:64,6,0	1/1:7,0:7:13.64:62,14,0	1/1:5,0:5:6.38:21,6,0	1/1:6,0:6:12.79:53,13,0	1/1:8,0:8:17.75:72,18,0	1/1:11,0:11:22.98:92,23,0	1/1:21,0:21:32.75:160,33,0	1/1:18,0:18:26.85:112,27,0	1/1:10,0:10:21.72:94,22,0
chr10	43740145	.	T	TTA	6056.82	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-8.045;DP=407;FS=7.749;HRun=0;HaplotypeScore=68.8517;InbreedingCoeff=0.9271;MQ=62.72;MQ0=2;MQRankSum=0.899;QD=25.24;ReadPosRankSum=-2.008;VQSLOD=4.3419;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:20.52:0,21,138	0/0:9,0:9:18.86:0,19,120	0/0:9,0:3:6.87:0,7,51	0/0:4,0:4:8.79:0,9,66	0/0:22,0:22:41.33:0,41,293	0/0:14,0:14:42.14:0,42,638	0/0:9,0:9:27.03:0,27,320	1/1:5,29:35:94.65:1241,95,0	0/0:7,0:7:18.04:0,18,206	1/1:6,9:15:38.58:408,39,0	1/1:2,15:17:38.58:374,39,0	1/1:12,0:12:15.72:65,16,0	1/1:14,0:14:29.54:127,30,0	1/1:9,0:9:10.88:47,11,0	0/0:25,0:25:46.02:0,46,281	0/0:18,0:18:37.85:0,38,259	0/0:28,0:28:70.30:0,70,534	1/1:4,12:16:2.32:349,2,0	1/1:2,11:15:40.72:435,41,0	1/1:3,13:15:40.03:432,40,0	1/1:0,7:7:15.05:234,15,0	1/1:5,0:5:10.41:45,10,0	1/1:7,0:6:13.47:58,13,0	1/1:8,0:8:17.98:72,18,0	1/1:1,10:13:27.07:421,27,0	1/1:0,20:22:66.10:888,66,0	1/1:0,17:19:30.10:497,30,0	1/1:1,9:10:23.95:363,24,0
chr10	43740146	.	T	TA	3596.53	PASS	AB=0.944;AC=32;AF=0.571;AN=56;BaseQRankSum=-1.546;DP=409;FS=3.805;HRun=0;HaplotypeScore=67.4983;InbreedingCoeff=0.6598;MQ=62.57;MQ0=2;MQRankSum=-1.889;QD=13.62;ReadPosRankSum=3.371;VQSLOD=4.7438;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:22:21.02:21,0,21	0/0:9,0:9:14.66:0,15,64	0/0:9,0:3:6.46:0,6,50	0/0:4,0:4:11.18:0,11,77	0/0:22,0:22:5.62:0,6,161	0/0:14,0:14:42.14:0,42,583	0/0:9,0:9:27.04:0,27,333	1/1:32,3:35:30.04:515,30,0	0/0:7,0:7:18.04:0,18,217	0/1:10,4:14:4.93:229,0,5	0/1:14,0:14:14.83:117,0,15	1/1:0,12:12:18.05:206,18,0	1/1:0,14:14:33.09:391,33,0	1/1:1,9:10:12.03:141,12,0	0/0:25,0:25:36.38:0,36,365	0/0:18,0:18:39.38:0,39,332	0/0:28,0:28:60.26:0,60,264	1/1:13,2:15:7.60:194,8,0	0/1:15,0:15:16.97:144,0,17	1/1:15,1:15:11.06:153,11,0	1/1:7,0:7:14.76:106,15,0	1/1:1,6:7:11.94:113,12,0	1/1:1,6:6:15.04:177,15,0	1/1:1,8:9:21.05:235,21,0	1/1:13,0:13:25.91:151,26,0	1/1:23,0:23:33.22:363,33,0	1/1:19,0:19:29.38:177,29,0	1/1:11,1:12:23.54:164,24,0
chr10	43740154	.	T	TG	1097.04	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=-5.514;DP=425;FS=1.322;HRun=0;HaplotypeScore=75.6814;InbreedingCoeff=0.6895;MQ=59.87;MQ0=2;MQRankSum=-0.544;QD=18.91;ReadPosRankSum=3.476;VQSLOD=5.4934;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:20,0:20:15.20:16,0,15	1/1:0,10:10:23.99:295,24,0	0/0:10,0:2:0.89:0,1,2	0/0:6,0:3:8.88:0,9,72	0/0:23,0:23:5.30:0,5,172	0/0:17,0:17:51.13:0,51,656	0/0:9,0:9:24.04:0,24,312	0/0:37,0:37:99:0,101,645	0/0:6,0:6:15.03:0,15,190	0/0:18,0:18:45.44:0,45,340	0/0:11,0:11:32.31:0,32,209	0/0:11,0:11:23.26:0,23,144	0/0:14,0:14:30.23:0,30,195	0/0:10,0:10:23.56:0,24,169	0/0:24,0:24:33.32:0,33,327	0/0:20,0:20:46.49:0,46,347	1/1:0,28:28:69.23:914,69,0	0/0:16,0:16:32.02:0,32,197	0/0:17,0:16:38.08:0,38,298	0/0:16,0:15:41.16:0,41,273	0/0:7,0:7:12.79:0,13,70	0/0:8,0:8:23.57:0,24,165	0/0:10,0:9:17.38:0,17,102	0/0:10,0:10:28.68:0,29,167	0/0:13,0:13:26.68:0,27,178	0/0:22,0:22:63.65:0,64,422	0/0:19,0:19:37.99:0,38,249	0/0:13,0:13:29.34:0,29,193
chr10	43740252	.	A	ATTG	1521.55	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-4.881;DP=618;FS=10.191;HRun=0;HaplotypeScore=80.0384;InbreedingCoeff=0.9413;MQ=59.27;MQ0=1;MQRankSum=0.841;QD=29.26;ReadPosRankSum=0.039;VQSLOD=3.2342;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:71.77:0,72,955	0/0:3,0:3:9.02:0,9,110	0/0:18,0:9:11.78:0,12,101	0/0:18,0:16:31.74:0,32,374	0/0:27,0:27:51.11:0,51,652	0/0:18,0:18:45.08:0,45,565	0/0:21,0:21:48.10:0,48,610	0/0:33,0:33:46.03:0,46,540	0/0:20,0:20:51.10:0,51,636	0/0:29,0:29:43.09:0,43,732	0/0:15,0:15:30.07:0,30,391	0/0:19,0:19:30.06:0,30,373	0/0:20,0:20:42.14:0,42,599	0/0:15,0:15:24.05:0,24,306	1/1:4,28:32:51.17:1016,51,0	1/1:13,7:20:39.07:627,39,0	0/0:25,0:25:57.14:0,57,752	0/0:20,0:20:29.15:0,29,603	0/0:14,0:13:14.86:0,15,167	0/0:15,0:15:21.06:0,21,280	0/0:44,0:44:99:0,102,1301	0/0:23,0:23:54.17:0,54,745	0/0:16,0:16:21.02:0,21,259	0/0:27,0:27:63.17:0,63,856	0/0:22,0:22:42.12:0,42,564	0/0:29,0:29:54.13:0,54,711	0/0:26,0:26:57.14:0,57,754	0/0:15,0:15:33.11:0,33,467
chr10	43740662	.	A	ATTT	1654.33	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-3.815;DP=666;FS=2.094;HRun=10;HaplotypeScore=100.0574;InbreedingCoeff=0.8522;MQ=76.87;MQ0=0;MQRankSum=-2.432;QD=34.47;ReadPosRankSum=-1.544;VQSLOD=3.0668;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:35.03:0,35,655	0/0:10,0:10:21.04:0,21,255	0/0:21,0:20:25.38:0,25,268	0/0:9,0:9:3.64:0,4,158	0/0:27,0:27:75.20:0,75,912	0/0:27,0:28:73.77:0,74,898	0/0:23,0:23:63.15:0,63,753	0/0:38,0:38:90.19:0,90,1083	0/0:21,0:21:3.55:0,4,469	0/0:37,0:38:85.52:0,86,1035	0/0:26,0:26:66.16:0,66,803	0/0:27,0:27:69.16:0,69,816	0/0:22,0:22:60.14:0,60,717	0/0:19,0:19:51.14:0,51,620	1/1:7,18:26:61.73:1055,62,0	1/1:5,15:21:39.13:720,39,0	0/0:23,0:23:63.15:0,63,750	0/0:21,0:21:60.10:0,60,685	0/0:30,0:30:63.11:0,63,756	0/0:21,0:25:59.72:0,60,723	0/0:22,0:22:45.06:0,45,547	0/0:29,0:29:69.13:0,69,839	0/0:17,0:17:48.13:0,48,572	0/0:15,0:15:42.05:0,42,481	0/0:19,0:20:54.07:0,54,614	0/0:38,0:38:90.14:0,90,1074	0/0:30,0:30:72.12:0,72,864	0/0:11,0:11:21.02:0,21,254
chr10	43742517	.	T	TA	2779.12	PASS	AB=0.756;AC=22;AF=0.423;AN=52;BaseQRankSum=-4.479;DP=394;FS=4.301;HRun=11;HaplotypeScore=56.6100;InbreedingCoeff=0.4248;MQ=79.02;MQ0=2;MQRankSum=-0.636;QD=12.41;ReadPosRankSum=-1.608;VQSLOD=2.9671;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:17:38.78:0,39,302	0/1:8,1:9:6.53:7,0,139	0/1:24,2:15:10.95:11,0,34	0/0:21,0:15:2.53:0,3,21	0/0:30,1:31:16.08:0,16,448	0/0:24,1:25:17.30:0,17,311	0/1:7,1:9:7.48:7,0,122	0/1:11,15:26:17.09:350,0,17	0/0:9,0:9:17.93:0,18,139	1/1:5,8:14:0.02:202,0,0	1/1:2,17:19:36.50:356,37,0	0/0:7,0:7:14.93:0,15,114	0/0:4,0:4:8.97:0,9,70	0/0:6,0:6:11.95:0,12,93	./.	./.	0/0:33,0:33:77.66:0,78,599	0/1:6,13:19:22.19:159,0,22	0/1:4,11:15:16.08:212,0,16	1/1:3,7:10:14.99:142,15,0	1/1:0,3:3:9.02:91,9,0	0/0:1,0:1:2.99:0,3,23	0/0:5,0:5:8.94:0,9,67	0/0:7,0:7:11.92:0,12,89	1/1:6,14:20:30.06:304,30,0	1/1:4,22:26:54.06:526,54,0	1/1:4,12:16:26.99:261,27,0	1/1:0,12:12:33.07:335,33,0
chr10	43742749	.	GC	G	6031.56	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=6.918;DP=591;FS=0.358;HRun=4;HaplotypeScore=68.4110;InbreedingCoeff=0.9655;MQ=56.46;MQ0=13;MQRankSum=1.437;QD=27.17;ReadPosRankSum=1.588;VQSLOD=4.2735;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,99,1385	0/0:9,0:9:27.02:0,27,354	0/0:21,0:12:30.10:0,30,409	0/0:22,0:16:39.08:0,39,523	0/0:17,0:17:48.16:0,48,671	0/0:25,0:24:60.14:0,60,800	0/0:25,0:25:57.06:0,57,741	1/1:2,23:23:60.07:674,60,0	0/0:19,0:19:42.09:0,42,550	1/1:0,13:13:39.12:466,39,0	1/1:0,8:8:18.06:216,18,0	0/0:23,0:21:39.13:0,39,546	0/0:20,0:20:48.14:0,48,672	0/0:19,0:19:42.10:0,42,566	0/0:24,0:22:54.18:0,54,750	0/0:15,0:14:21.07:0,21,293	0/0:36,0:35:81.14:0,81,1067	1/1:3,21:21:3.29:462,3,0	1/1:1,14:12:36.03:389,36,0	1/1:0,19:19:42.07:487,42,0	1/1:1,42:42:99:1279,108,0	0/0:3,0:3:9.03:0,9,120	0/0:13,0:13:29.96:0,30,419	0/0:36,0:35:81.12:0,81,1085	1/1:4,15:19:39.07:451,39,0	1/1:0,23:22:66.18:779,66,0	1/1:1,16:16:39.12:468,39,0	1/1:5,11:13:30.09:360,30,0
chr10	43742758	.	G	GT	983.25	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=0.204;DP=599;FS=17.588;HRun=5;HaplotypeScore=85.0759;InbreedingCoeff=0.9805;MQ=62.08;MQ0=4;MQRankSum=0.713;QD=25.21;ReadPosRankSum=1.182;VQSLOD=2.0891;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,105,1118	0/0:7,0:7:15.04:0,15,161	0/0:25,0:14:33.07:0,33,344	0/0:30,0:23:38.71:0,39,497	0/0:18,0:18:51.13:0,51,548	0/0:25,0:25:57.13:0,57,604	0/0:18,0:18:48.12:0,48,514	0/0:25,0:23:60.15:0,60,644	0/0:21,0:21:42.08:0,42,440	0/0:15,0:15:39.10:0,39,418	0/0:7,0:7:21.05:0,21,225	0/0:26,0:25:54.02:0,54,572	0/0:22,0:22:54.13:0,54,580	0/0:18,0:18:42.10:0,42,448	1/1:1,24:25:51.17:671,51,0	1/1:0,14:14:33.11:434,33,0	0/0:33,0:32:75.16:0,75,793	0/0:22,0:20:42.10:0,42,450	0/0:16,0:13:33.05:0,33,342	0/0:23,0:23:63.16:0,63,675	0/0:40,0:40:99:0,105,1124	0/0:6,0:6:15.03:0,15,159	0/0:10,0:10:27.07:0,27,290	0/0:38,0:38:84.21:0,84,902	0/0:17,0:17:42.07:0,42,433	0/0:27,0:26:72.14:0,72,760	0/0:18,0:17:45.11:0,45,481	0/0:10,0:10:30.08:0,30,321
chr10	43744485	.	CA	C	3563.25	PASS	AB=0.939;AC=34;AF=0.607;AN=56;BaseQRankSum=-0.032;DP=599;FS=7.424;HRun=16;HaplotypeScore=86.2534;InbreedingCoeff=0.4966;MQ=61.48;MQ0=8;MQRankSum=3.870;QD=9.66;ReadPosRankSum=0.446;VQSLOD=2.5146;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:33:63.10:0,63,654	1/1:3,0:3:3.23:25,3,0	0/0:50,0:15:10.85:0,11,70	0/1:32,0:14:35.79:36,0,112	0/0:40,0:40:72.54:0,73,733	0/0:31,0:31:47.79:0,48,686	0/0:26,0:26:56.69:0,57,572	1/1:27,3:30:21.45:368,21,0	0/0:9,0:9:5.69:0,6,44	1/1:4,20:23:53.42:448,53,0	1/1:6,16:22:28.76:296,29,0	0/1:10,0:10:6.78:53,0,7	1/1:8,0:8:2.63:25,3,0	0/1:9,0:9:7.34:24,0,7	0/0:17,0:17:30.89:0,31,209	0/0:23,0:23:52.15:0,52,385	1/1:36,0:36:19.36:215,19,0	1/1:12,6:17:50.57:423,51,0	1/1:5,17:22:50.31:423,50,0	1/1:12,11:23:17.74:144,18,0	0/1:6,8:14:10.76:42,0,11	1/1:15,0:15:14.82:92,15,0	0/1:18,0:18:22.61:85,0,23	0/1:22,0:20:24.65:25,0,58	1/1:10,1:11:29.96:252,30,0	1/1:7,13:19:41.85:359,42,0	1/1:4,22:26:17.89:152,18,0	1/1:2,4:6:8.86:77,9,0
chr10	43744495	.	AC	A	1095.02	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=4.122;DP=547;FS=7.470;HRun=2;HaplotypeScore=88.1325;InbreedingCoeff=0.3605;MQ=68.10;MQ0=6;MQRankSum=2.139;QD=4.91;ReadPosRankSum=0.344;VQSLOD=0.2462;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:69.18:0,69,876	0/1:3,0:3:11.56:12,0,35	0/0:37,0:15:23.10:0,23,228	0/1:32,0:19:11.21:11,0,192	0/0:34,0:34:28.28:0,28,763	0/0:27,0:27:48.58:0,49,727	0/0:23,0:23:49.11:0,49,679	0/0:30,0:29:20.41:0,20,220	0/0:5,0:5:11.99:0,12,114	0/0:24,0:23:0.34:0,0,70	0/1:18,0:18:37.01:37,0,44	1/1:0,8:8:17.79:204,18,0	1/1:0,8:8:2.93:30,3,0	1/1:1,5:6:9.03:116,9,0	0/0:14,0:14:35.75:0,36,345	0/0:24,0:24:47.83:0,48,631	0/0:31,0:31:70.88:0,71,436	1/1:18,0:17:8.86:33,9,0	0/1:23,0:23:73.08:73,0,74	0/1:14,0:14:11.15:11,0,25	0/0:17,0:17:7.52:0,8,116	1/1:1,13:14:32.85:327,33,0	1/1:1,16:17:21.85:267,22,0	1/1:3,14:15:12.01:136,12,0	0/0:18,0:18:20.18:0,20,197	0/1:18,0:17:15.75:16,0,37	0/1:27,0:27:8.57:9,0,65	0/0:9,0:9:1.58:0,2,56
chr10	43745951	.	CTGAGT	C	1141.01	PASS	AB=0.523;AC=3;AF=0.054;AN=56;BaseQRankSum=6.457;DP=437;FS=7.550;HRun=0;HaplotypeScore=81.0867;InbreedingCoeff=0.6974;MQ=67.95;MQ0=0;MQRankSum=-2.466;QD=38.03;ReadPosRankSum=3.384;VQSLOD=2.9089;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:78.27:0,78,2335	1/1:1,6:7:18.06:369,18,0	0/0:20,0:19:54.18:0,54,1456	0/0:26,0:25:57.20:0,57,1641	0/0:16,0:16:42.12:0,42,1148	0/0:22,0:22:63.20:0,63,1834	0/0:11,0:11:33.11:0,33,1007	0/0:24,0:24:60.20:0,60,1713	0/0:9,0:9:27.09:0,27,821	0/0:14,0:14:33.11:0,33,978	0/0:9,0:9:24.08:0,24,731	0/0:11,0:11:33.11:0,33,966	0/0:9,0:9:27.09:0,27,810	0/0:7,0:7:21.07:0,21,641	0/0:13,0:13:39.13:0,39,1190	0/0:20,0:20:60.21:0,60,1828	0/1:2,21:23:6.17:875,0,6	0/0:20,0:20:57.20:0,57,1719	0/0:19,0:18:54.19:0,54,1604	0/0:5,0:5:12.04:0,12,366	0/0:18,0:18:54.19:0,54,1647	0/0:5,0:5:15.05:0,15,439	0/0:7,0:7:21.07:0,21,594	0/0:20,0:20:60.21:0,60,1830	0/0:8,0:8:24.08:0,24,732	0/0:17,0:17:45.15:0,45,1374	0/0:30,0:30:81.28:0,81,2382	0/0:19,0:19:57.20:0,57,1674
chr10	43746864	.	G	GGT	2351.44	PASS	AB=0.765;AC=31;AF=0.574;AN=54;BaseQRankSum=-0.565;DP=577;FS=11.175;HRun=0;HaplotypeScore=100.3329;InbreedingCoeff=0.0972;MQ=64.55;MQ0=9;MQRankSum=0.696;QD=5.68;ReadPosRankSum=-0.849;VQSLOD=1.8165;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:21,1:34:12.01:109,12,0	1/1:7,0:7:14.98:158,15,0	./.	0/1:25,0:16:0:0,0,0	1/1:9,0:13:3:26,3,0	0/0:17,0:19:19.03:0,19,157	0/0:20,0:20:20.85:0,21,198	0/0:35,0:35:0.81:0,1,147	0/0:21,0:24:32.40:0,32,277	0/1:15,10:25:61.14:321,0,61	1/1:6,1:10:6.01:71,6,0	1/1:16,2:27:14.94:130,15,0	1/1:9,1:13:17.98:174,18,0	1/1:19,0:23:2.95:26,3,0	0/0:9,0:11:8.27:0,8,41	0/0:11,0:19:17.04:0,17,84	1/1:10,0:18:12:104,12,0	0/1:14,8:23:41.97:262,0,42	1/1:14,1:14:3.01:45,3,0	0/1:10,7:17:47.60:160,0,48	0/1:19,8:27:32.93:33,0,86	1/1:11,0:17:12.01:116,12,0	0/1:10,7:18:23.65:81,0,24	0/1:10,1:25:8.80:197,0,9	0/1:18,12:30:51.75:200,0,52	0/1:16,0:15:3.15:54,0,3	0/1:7,3:13:22.94:216,0,23	0/1:8,2:10:35.97:36,0,49
chr10	43747589	.	CT	C	1551.05	PASS	AB=0.735;AC=29;AF=0.518;AN=56;BaseQRankSum=3.240;DP=532;FS=2.603;HRun=16;HaplotypeScore=75.9389;InbreedingCoeff=0.1849;MQ=67.16;MQ0=6;MQRankSum=1.686;QD=4.25;ReadPosRankSum=4.405;VQSLOD=1.2317;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,2:28:12.99:0,13,302	0/1:9,0:8:10.01:38,0,10	0/0:20,0:11:12.42:0,12,110	0/0:19,0:9:4.43:0,4,19	0/0:26,3:30:14.26:0,14,273	0/0:21,1:21:13.98:0,14,210	0/0:16,0:19:9.96:0,10,188	0/1:20,11:33:46.42:154,0,46	0/0:12,0:12:11.01:0,11,173	1/1:8,11:20:11.44:166,11,0	0/1:12,5:18:6.63:125,0,7	0/1:4,0:11:10.36:16,0,10	1/1:7,0:18:19.30:55,19,0	0/1:2,0:9:1.49:14,0,1	0/1:24,0:24:11.68:12,0,163	0/0:15,0:17:16.46:0,16,247	0/1:25,5:34:10.74:210,0,11	1/1:8,6:14:14.67:89,15,0	1/1:15,8:24:27.45:138,27,0	1/1:11,6:17:1.72:124,2,0	0/1:7,6:13:28.75:68,0,29	1/1:3,0:12:14.20:40,14,0	1/1:2,0:14:2.63:34,3,0	1/1:3,0:14:16.05:46,16,0	0/1:7,7:14:5.86:75,0,6	1/1:11,8:18:22.43:130,22,0	0/1:14,13:27:26.16:154,0,26	0/1:8,10:18:14.49:47,0,14
chr10	43747712	.	C	CT	1153.74	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-7.118;DP=524;FS=0.000;HRun=3;HaplotypeScore=47.2551;InbreedingCoeff=0.9861;MQ=69.99;MQ0=2;MQRankSum=0.501;QD=37.22;ReadPosRankSum=0.692;VQSLOD=3.7597;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,111,1360	0/0:9,0:9:24.08:0,24,298	0/0:14,0:12:32.97:0,33,380	0/0:21,0:17:44.92:0,45,519	0/0:14,0:14:42.13:0,42,520	0/0:20,0:20:60.18:0,60,731	0/0:21,0:21:60.17:0,60,730	0/0:25,0:25:63.19:0,63,769	0/0:16,0:16:45.13:0,45,545	0/0:17,0:17:48.15:0,48,595	0/0:20,0:20:60.19:0,60,743	0/0:19,0:19:57.18:0,57,707	0/0:20,0:20:60.15:0,60,726	0/0:13,0:13:39.12:0,39,483	1/1:0,18:18:54.18:778,54,0	1/1:1,12:13:15.36:495,15,0	0/0:42,0:42:99:0,126,1515	0/0:18,0:18:45.14:0,45,558	0/0:24,0:24:72.18:0,72,857	0/0:14,0:14:36.11:0,36,445	0/0:17,0:17:51.14:0,51,617	0/0:6,0:6:18.06:0,18,223	0/0:12,0:12:30.09:0,30,372	0/0:22,0:22:63.18:0,63,767	0/0:15,0:15:42.13:0,42,520	0/0:19,0:19:51.16:0,51,632	0/0:26,0:26:78.19:0,78,926	0/0:10,0:9:27.08:0,27,335
chr10	43747871	.	C	CT	446.53	PASS	AB=0.857;AC=5;AF=0.089;AN=56;BaseQRankSum=4.585;DP=496;FS=1.628;HRun=12;HaplotypeScore=52.2990;InbreedingCoeff=0.6749;MQ=64.38;MQ0=1;MQRankSum=1.926;QD=9.71;ReadPosRankSum=0.889;VQSLOD=2.5463;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:37:83.65:0,84,587	0/0:9,0:9:17.84:0,18,131	0/0:10,0:9:16.90:0,17,111	0/0:8,0:6:10.30:0,10,59	0/0:24,1:26:20.53:0,21,302	0/0:19,0:20:52.72:0,53,376	0/0:15,0:15:38.77:0,39,284	0/0:27,2:28:26.40:0,26,345	0/0:17,0:18:43.75:0,44,309	0/0:19,0:19:44.69:0,45,327	0/0:13,0:13:23.81:0,24,175	0/0:14,0:15:40.81:0,41,290	0/0:14,0:15:31.84:0,32,223	0/0:15,0:15:35.73:0,36,259	1/1:7,15:22:11.14:270,11,0	1/1:4,14:18:12.39:273,12,0	0/0:16,0:16:44.74:0,45,328	0/0:20,0:19:41.65:0,42,303	0/0:31,0:30:65.48:0,65,473	0/0:16,1:19:13.63:0,14,242	0/0:5,0:6:5.01:0,5,28	0/1:5,1:6:15.82:23,0,16	0/0:9,0:9:17.88:0,18,131	0/0:18,0:19:40.71:0,41,290	0/0:17,1:19:20.59:0,21,305	0/0:22,0:23:49.63:0,50,347	0/0:26,1:29:14.18:0,14,349	0/0:8,0:9:22.89:0,23,159
chr10	43749041	.	A	AG	1221.43	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-8.361;DP=587;FS=0.000;HRun=0;HaplotypeScore=55.1602;InbreedingCoeff=0.9916;MQ=69.07;MQ0=1;MQRankSum=-1.071;QD=43.62;ReadPosRankSum=1.160;VQSLOD=3.9221;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:87.16:0,87,1149	0/0:5,0:5:15.05:0,15,209	0/0:20,0:14:42.14:0,42,586	0/0:17,0:16:43.72:0,44,523	0/0:27,0:27:81.27:0,81,1133	0/0:23,0:23:69.23:0,69,965	0/0:25,0:25:72.24:0,72,1007	0/0:30,0:29:84.24:0,84,1153	0/0:21,0:21:63.19:0,63,863	0/0:17,0:16:45.15:0,45,636	0/0:22,0:22:63.21:0,63,880	0/0:13,0:13:39.13:0,39,545	0/0:17,0:17:51.17:0,51,713	0/0:16,0:16:48.16:0,48,670	1/1:0,16:16:48.16:767,48,0	1/1:0,12:12:36.12:576,36,0	0/0:44,0:44:99:0,132,1830	0/0:23,0:23:63.19:0,63,862	0/0:15,0:15:45.15:0,45,629	0/0:28,0:28:75.25:0,75,1049	0/0:23,0:23:60.13:0,60,784	0/0:13,0:13:39.13:0,39,545	0/0:17,0:17:51.16:0,51,697	0/0:19,0:19:54.18:0,54,755	0/0:25,0:25:60.20:0,60,839	0/0:25,0:25:72.24:0,72,995	0/0:28,0:28:75.25:0,75,1049	0/0:15,0:15:33.11:0,33,461
chr10	43749112	.	G	GCTCTCTCC	14483.06	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-11.572;DP=634;FS=3.283;HRun=0;HaplotypeScore=143.2068;InbreedingCoeff=0.9739;MQ=70.36;MQ0=2;MQRankSum=-12.323;QD=58.16;ReadPosRankSum=-1.083;VQSLOD=4.7171;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:78.01:0,78,1665	0/0:7,0:7:21.01:0,21,436	0/0:29,0:20:10.88:0,11,296	0/0:43,0:32:39.28:0,39,722	0/0:29,0:28:66.18:0,66,1630	0/0:18,0:18:33.08:0,33,804	0/0:17,0:17:36.11:0,36,832	1/1:24,0:23:36.04:545,36,0	0/0:26,0:26:66.21:0,66,1592	1/1:4,13:20:42.04:1169,42,0	1/1:1,23:26:48.12:1788,48,0	0/0:16,0:16:45.14:0,45,1075	0/0:21,0:21:54.13:0,54,1270	0/0:22,0:22:60.14:0,60,1392	0/0:17,0:17:48.16:0,48,1198	0/0:24,0:24:66.23:0,66,1682	0/0:29,0:29:66.07:0,66,1573	1/1:6,8:17:12.04:491,12,0	1/1:5,14:19:45.11:1320,45,0	1/1:2,30:32:60.12:2130,60,0	1/1:4,5:10:6.02:253,6,0	0/0:11,0:11:27.09:0,27,703	0/0:21,0:21:60.16:0,60,1484	0/0:23,0:23:57.08:0,57,1241	1/1:3,24:28:51.13:2022,51,0	1/1:4,16:22:54.19:1922,54,0	1/1:5,24:30:42.02:1714,42,0	1/1:2,13:19:27.09:1129,27,0
chr10	43749125	.	CTCCT	C	993.42	PASS	AB=0.953;AC=8;AF=0.143;AN=56;BaseQRankSum=3.640;DP=606;FS=6.408;HRun=0;HaplotypeScore=139.4776;InbreedingCoeff=-0.1690;MQ=72.25;MQ0=4;MQRankSum=-1.657;QD=6.25;ReadPosRankSum=-6.257;VQSLOD=-0.5125;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:90.22:0,90,2046	0/0:7,0:7:21.07:0,21,567	0/0:40,0:25:45.65:0,46,912	0/0:48,0:34:45.62:0,46,1009	0/0:24,0:23:66.23:0,66,1750	0/0:14,0:14:36.12:0,36,945	0/0:13,0:13:39.13:0,39,933	0/1:7,11:17:99:365,0,346	0/0:23,0:23:66.23:0,66,1693	0/1:17,0:17:89.89:90,0,820	0/0:26,0:26:6.65:0,7,954	0/0:18,0:18:51.18:0,51,1347	0/0:21,0:21:60.21:0,60,1564	0/0:21,0:21:60.21:0,60,1619	0/0:17,0:17:51.18:0,51,1376	0/0:23,0:23:69.24:0,69,1833	0/0:29,0:29:78.25:0,78,1892	0/1:13,0:13:93.03:93,0,278	0/1:16,0:15:99:157,0,572	0/1:28,0:28:99:119,0,799	0/0:10,0:10:13.86:0,14,299	0/0:10,0:10:30.10:0,30,783	0/0:23,0:23:69.24:0,69,1858	0/0:22,0:22:57.16:0,57,1397	0/1:27,0:28:34.05:34,0,788	0/1:22,0:21:99:262,0,911	0/0:28,0:28:48.87:0,49,997	0/1:17,0:17:8.19:8,0,274
chr10	43749372	.	CT	C	1733.76	PASS	AB=0.886;AC=18;AF=0.321;AN=56;BaseQRankSum=9.055;DP=508;FS=2.564;HRun=10;HaplotypeScore=56.6636;InbreedingCoeff=0.5272;MQ=64.85;MQ0=0;MQRankSum=1.908;QD=9.03;ReadPosRankSum=-0.243;VQSLOD=1.9879;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,1:25:40.07:0,40,641	0/0:4,0:4:12.01:0,12,121	0/1:11,2:12:69.91:70,0,136	0/1:11,1:12:35.44:35,0,82	0/0:25,0:25:66:0,66,701	0/0:15,1:16:22.14:0,22,472	0/0:19,0:19:48.04:0,48,486	0/1:23,0:23:15.73:16,0,88	0/0:20,0:20:48.13:0,48,530	0/0:14,0:14:27.06:0,27,290	0/0:30,1:31:47.41:0,47,733	1/1:1,10:11:26.99:234,27,0	1/1:3,16:19:47.88:402,48,0	1/1:2,12:14:32.99:286,33,0	0/0:21,0:21:48.13:0,48,531	0/1:13,3:16:36.05:36,0,318	0/0:29,2:31:38.01:0,38,858	0/0:11,0:11:26.99:0,27,282	0/0:25,0:25:66.13:0,66,693	0/0:23,1:25:24.14:0,24,532	0/0:14,0:14:19.12:0,19,287	1/1:0,13:13:35.99:312,36,0	1/1:2,12:14:32.99:286,33,0	1/1:0,8:10:28.07:220,28,0	0/0:16,0:16:33.01:0,33,342	0/1:24,3:27:2.96:3,0,655	0/1:14,4:18:26.94:27,0,405	0/0:18,0:18:48.04:0,48,498
chr10	43750811	.	TG	T	1825.73	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=3.014;DP=677;FS=1.141;HRun=2;HaplotypeScore=79.9286;InbreedingCoeff=0.9990;MQ=72.01;MQ0=1;MQRankSum=0.232;QD=35.80;ReadPosRankSum=1.629;VQSLOD=4.2660;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:84.21:0,84,1174	0/0:10,0:10:30.10:0,30,449	0/0:12,1:12:30.08:0,30,425	0/0:20,0:18:38.56:0,39,506	0/0:13,0:13:39.12:0,39,556	0/0:24,0:24:72.24:0,72,1077	0/0:26,0:26:78.21:0,78,1105	0/0:35,0:35:96.32:0,96,1420	0/0:23,0:23:69.22:0,69,1014	0/0:24,0:24:72.24:0,72,1077	0/0:13,0:13:39.12:0,39,563	0/0:35,0:35:99:0,102,1487	0/0:29,0:29:84.27:0,84,1233	0/0:28,0:28:84.25:0,84,1235	1/1:0,26:26:78.25:1013,78,0	1/1:0,25:25:72.23:935,72,0	0/0:45,0:45:99:0,132,1958	0/0:19,0:19:51.14:0,51,740	0/0:16,0:16:42.13:0,42,611	0/0:14,0:14:42.13:0,42,609	0/0:68,0:68:99:0,202,2935	0/0:22,0:22:63.21:0,63,943	0/0:11,0:11:33.11:0,33,495	0/0:38,0:38:99:0,114,1660	0/0:12,0:12:36.12:0,36,540	0/0:24,0:24:72.24:0,72,1079	0/0:24,0:24:72.24:0,72,1079	0/0:12,0:12:33.11:0,33,495
chr10	43752118	.	T	TGG	125.04	PASS	AC=4;AF=0.074;AN=54;BaseQRankSum=3.156;DP=381;FS=3.901;HRun=2;HaplotypeScore=63.6361;InbreedingCoeff=0.7366;MQ=56.89;MQ0=11;MQRankSum=0.508;QD=4.31;ReadPosRankSum=0.756;VQSLOD=-0.6924;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:42.07:0,42,528	./.	0/0:13,0:1:0:0,0,0	0/0:9,0:5:3.08:0,3,39	0/0:21,0:19:27.03:0,27,338	0/0:14,0:14:36.12:0,36,506	0/0:12,0:12:27.09:0,27,382	0/0:19,0:19:35.98:0,36,463	0/0:16,0:16:33.08:0,33,423	0/0:19,0:19:38.98:0,39,506	0/0:13,0:13:26.03:0,26,387	0/0:17,0:17:21:0,21,281	0/0:5,0:5:5.99:0,6,66	0/0:14,0:14:30.08:0,30,375	1/1:3,3:16:9.03:154,9,0	1/1:2,11:13:6:73,6,0	0/0:22,0:22:56.65:0,57,755	0/0:12,0:11:24.04:0,24,310	0/0:12,0:10:24.04:0,24,311	0/0:19,0:19:45.10:0,45,586	0/0:10,0:10:30.07:0,30,387	0/0:11,0:11:21.04:0,21,274	0/0:11,0:10:20.38:0,20,283	0/0:12,0:11:23.99:0,24,294	0/0:11,0:11:23.87:0,24,301	0/0:11,0:11:27.05:0,27,303	0/0:11,0:11:20.74:0,21,293	0/0:13,0:11:18.01:0,18,232
chr10	43752370	.	GCTAAAAAA	G	1709.09	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.651;DP=527;FS=6.875;HRun=0;HaplotypeScore=129.0474;InbreedingCoeff=0.9386;MQ=73.96;MQ0=0;MQRankSum=-8.023;QD=38.84;ReadPosRankSum=2.634;VQSLOD=2.7904;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:93.30:0,93,3681	0/0:3,0:3:9.03:0,9,374	0/0:16,0:16:28.33:0,28,825	0/0:12,0:13:22.89:0,23,795	0/0:19,0:19:51.16:0,51,1981	0/0:22,0:22:57.20:0,57,2368	0/0:16,0:16:30.10:0,30,1240	0/0:28,0:28:60.20:0,60,2228	0/0:15,0:15:33.11:0,33,1371	0/0:18,0:18:45.15:0,45,1813	0/0:4,0:4:9.03:0,9,374	0/0:20,0:20:51.18:0,51,2063	0/0:14,0:14:33.11:0,33,1368	0/0:22,0:22:51.16:0,51,2012	1/1:12,14:26:42.14:1067,42,0	1/1:6,12:18:30.10:764,30,0	0/0:27,0:27:63.19:0,63,2455	0/0:21,0:21:57.18:0,57,2120	0/0:22,0:22:39.13:0,39,1595	0/0:15,0:15:36.12:0,36,1382	0/0:15,0:15:36.12:0,36,1496	0/0:13,0:13:27.09:0,27,1070	0/0:16,0:16:36.12:0,36,1490	0/0:33,0:33:78.27:0,78,3126	0/0:12,0:12:24.07:0,24,835	0/0:25,0:25:60.21:0,60,2330	0/0:28,0:28:69.71:0,70,2833	0/0:10,0:10:27.09:0,27,897
chr10	43754394	.	CAAAAA	C	924.67	PASS	AB=0.938;AC=5;AF=0.089;AN=56;BaseQRankSum=6.015;DP=506;FS=8.780;HRun=16;HaplotypeScore=101.5892;InbreedingCoeff=0.7399;MQ=78.79;MQ0=8;MQRankSum=-5.818;QD=17.78;ReadPosRankSum=4.370;VQSLOD=0.3229;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:27:70.12:0,70,1773	0/0:4,0:4:9.03:0,9,233	0/0:63,0:28:36.21:0,36,869	0/0:40,0:16:19.88:0,20,289	0/0:27,0:27:57.20:0,57,1410	0/0:8,0:10:27.09:0,27,652	0/0:7,0:10:23.82:0,24,524	0/0:6,0:12:21.07:0,21,376	0/0:13,0:13:24.08:0,24,640	0/0:20,0:20:48.16:0,48,1032	0/0:20,0:20:51.17:0,51,1148	0/0:12,0:12:12.04:0,12,294	0/0:9,0:9:19.62:0,20,435	0/0:7,0:7:15.05:0,15,385	1/1:10,8:20:35.81:502,36,0	1/1:5,10:17:35.98:535,36,0	0/0:17,0:21:45.15:0,45,1164	0/0:18,0:18:33.11:0,33,764	0/0:12,0:12:30.09:0,30,629	0/0:11,0:11:30.09:0,30,598	0/0:14,0:14:23.94:0,24,508	0/1:14,1:15:16.59:17,0,631	0/0:16,0:16:30.99:0,31,725	0/0:11,0:11:21.07:0,21,533	0/0:20,0:20:54.18:0,54,1207	0/0:14,0:14:36.12:0,36,765	0/0:21,0:21:48.15:0,48,1123	0/0:21,0:21:48.15:0,48,1111
chr10	43754410	.	A	AAG	1621.60	PASS	AB=0.729;AC=23;AF=0.411;AN=56;BaseQRankSum=4.530;DP=521;FS=22.788;HRun=0;HaplotypeScore=100.3649;InbreedingCoeff=-0.0655;MQ=77.93;MQ0=8;MQRankSum=-6.266;QD=5.20;ReadPosRankSum=4.565;VQSLOD=0.7267;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:27:43.83:44,0,205	0/0:4,0:4:11.86:0,12,83	0/0:65,0:24:31.11:0,31,277	0/0:48,0:21:13.03:0,13,120	0/1:26,0:30:99:178,0,172	0/0:16,0:17:8.50:0,8,238	0/0:10,0:11:11.93:0,12,113	0/0:14,0:15:23.87:0,24,135	0/0:10,0:10:29.65:0,30,254	0/1:15,0:30:60.53:176,0,61	0/1:10,0:17:27.34:59,0,27	0/1:3,0:16:7.10:41,0,7	1/1:7,0:8:5.15:115,5,0	1/1:6,0:6:10.79:76,11,0	1/1:23,0:23:40.97:270,41,0	1/1:16,0:16:21.50:118,21,0	0/0:24,0:24:47.68:0,48,461	0/1:7,1:20:4.24:115,0,4	0/1:5,0:7:11.69:56,0,12	0/1:3,0:10:34.38:37,0,34	0/1:5,0:12:3.22:15,0,3	0/1:6,0:7:21.56:41,0,22	0/1:4,8:15:28.99:78,0,29	0/0:7,4:14:2.22:0,2,15	0/1:11,0:16:34.24:127,0,34	0/1:9,1:15:1.36:79,0,1	0/1:9,0:20:18.55:106,0,19	0/1:16,0:17:34.68:64,0,35
chr10	43754458	.	ATTTT	A	1724.02	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.092;DP=462;FS=16.016;HRun=9;HaplotypeScore=83.5588;InbreedingCoeff=0.9739;MQ=74.00;MQ0=0;MQRankSum=-3.466;QD=35.92;ReadPosRankSum=3.129;VQSLOD=0.7798;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:25:75.26:0,75,1904	0/0:7,0:7:18.06:0,18,454	0/0:9,0:10:18.02:0,18,320	0/0:18,0:18:27.56:0,28,573	0/0:23,0:23:66.23:0,66,1701	0/0:22,0:22:63.22:0,63,1641	0/0:28,0:28:84.29:0,84,2196	0/0:28,0:28:78.26:0,78,1942	0/0:9,0:9:27.09:0,27,651	0/0:20,0:20:57.18:0,57,1363	0/0:12,0:12:36.12:0,36,909	0/0:16,0:17:39.12:0,39,898	0/0:7,0:7:18.06:0,18,471	0/0:6,0:6:18.06:0,18,466	1/1:4,24:28:66.21:1104,66,0	1/1:1,19:20:45.15:741,45,0	0/0:21,0:21:60.21:0,60,1510	0/0:14,0:15:33.11:0,33,806	0/0:25,0:25:72.23:0,72,1785	0/0:18,0:18:48.16:0,48,1225	0/0:12,0:12:24.08:0,24,628	0/0:7,0:7:21.07:0,21,500	0/0:9,0:9:17.69:0,18,433	0/0:12,0:12:27.09:0,27,701	0/0:14,0:14:42.14:0,42,1096	0/0:22,0:22:66.18:0,66,1629	0/0:14,0:15:33.11:0,33,790	0/0:12,0:12:27.09:0,27,706
chr10	43755534	.	C	CT	986.34	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.502;DP=682;FS=0.661;HRun=8;HaplotypeScore=68.0409;InbreedingCoeff=0.9967;MQ=80.09;MQ0=0;MQRankSum=-3.217;QD=24.06;ReadPosRankSum=2.383;VQSLOD=4.4831;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,144,1302	0/0:7,0:7:21.01:0,21,192	0/0:22,0:22:50.75:0,51,432	0/0:15,0:14:27.18:0,27,243	0/0:27,0:27:57:0,57,518	0/0:21,0:21:53.97:0,54,481	0/0:22,0:22:59.99:0,60,535	0/0:32,0:32:74.99:0,75,680	0/0:26,0:26:72.02:0,72,654	0/0:44,0:44:99:0,126,1130	0/0:15,0:15:39.02:0,39,357	0/0:27,0:27:81.04:0,81,737	0/0:23,0:23:63.02:0,63,573	0/0:24,0:24:66:0,66,594	1/1:4,18:22:39.12:450,39,0	1/1:0,19:19:57.17:658,57,0	0/0:30,0:30:75.01:0,75,681	0/0:23,0:23:63.03:0,63,576	0/0:28,0:28:63.03:0,63,576	0/0:28,0:28:72.01:0,72,653	0/0:28,0:28:63.03:0,63,576	0/0:21,0:21:57:0,57,512	0/0:32,0:32:83.40:0,83,748	0/0:18,0:18:51.02:0,51,466	0/0:17,0:17:38.98:0,39,349	0/0:31,0:31:81.02:0,81,737	0/0:21,0:21:47.98:0,48,433	0/0:9,0:9:27.01:0,27,247
chr10	43756534	.	CCGTGGTGATGCT	C	1651.93	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.451;DP=672;FS=2.120;HRun=0;HaplotypeScore=222.1251;InbreedingCoeff=0.9816;MQ=82.82;MQ0=0;MQRankSum=-6.779;QD=61.18;ReadPosRankSum=2.539;VQSLOD=2.9950;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,123,7209	1/1:0,4:4:12.04:451,12,0	0/0:16,0:16:48.16:0,48,2327	0/0:22,0:22:65.37:0,65,3544	0/0:18,0:18:42.14:0,42,2408	0/0:22,0:22:63.22:0,63,3642	0/0:23,0:23:69.19:0,69,3495	0/0:23,0:23:63.21:0,63,3473	0/0:24,0:24:72.25:0,72,3965	0/0:23,0:23:63.10:0,63,3774	0/0:11,0:11:33.08:0,33,1635	0/0:37,0:37:99:0,102,5698	0/0:20,0:20:54.19:0,54,3263	0/0:19,0:19:51.18:0,51,3060	0/0:27,0:27:81.24:0,81,4456	0/0:29,0:29:84.29:0,84,4962	1/1:6,17:23:36.12:1317,36,0	0/0:32,0:32:96.33:0,96,5648	0/0:33,0:33:93.31:0,93,5123	0/0:23,0:23:63.20:0,63,3283	0/0:51,0:51:99:0,154,8890	0/0:19,0:19:45.15:0,45,2656	0/0:20,0:20:39.71:0,40,1965	0/0:26,0:26:75.26:0,75,4531	0/0:22,0:22:63.20:0,63,3365	0/0:31,0:31:90.31:0,90,5249	0/0:23,0:23:69.24:0,69,3761	0/0:8,0:8:21.07:0,21,1294
chr10	43759487	.	AGT	A	238.67	PASS	AB=0.912;AC=11;AF=0.229;AN=48;BaseQRankSum=-0.011;DP=629;FS=2.266;HRun=0;HaplotypeScore=130.0089;InbreedingCoeff=0.1828;MQ=62.13;MQ0=7;MQRankSum=0.307;QD=1.14;ReadPosRankSum=2.937;VQSLOD=2.1955;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:14.93:0,15,140	0/0:8,0:8:2.97:0,3,20	./.	./.	./.	0/1:8,3:11:35.29:56,0,35	0/1:28,6:35:99:108,0,230	0/0:24,0:24:1.25:0,1,3	0/1:29,1:31:46.70:47,0,156	0/0:23,0:22:6.41:0,6,42	0/0:15,0:15:2.74:0,3,12	0/0:30,0:30:8.86:0,9,63	0/0:17,0:17:6.74:0,7,28	0/0:25,0:25:5.54:0,6,25	1/1:36,0:36:11.36:56,11,0	1/1:21,0:21:13.94:70,14,0	0/0:22,0:22:16.43:0,16,147	0/0:18,0:18:8.76:0,9,54	0/0:14,0:14:2.92:0,3,19	./.	0/1:43,0:43:0.10:0,0,0	0/0:17,0:17:12.22:0,12,51	0/1:16,0:16:14.47:14,0,18	0/0:35,0:35:4.22:0,4,28	0/0:22,0:22:1.44:0,1,19	0/0:20,0:20:2.98:0,3,21	1/1:16,0:15:2.56:19,3,0	0/0:8,0:8:2.68:0,3,11
chr10	43759519	.	TGTGTGTGTGTGTGTGC	T	1146.92	PASS	AC=4;AF=0.074;AN=54;BaseQRankSum=3.014;DP=572;FS=2.734;HRun=0;HaplotypeScore=195.9807;InbreedingCoeff=0.8279;MQ=49.23;MQ0=12;MQRankSum=-3.230;QD=20.12;ReadPosRankSum=2.679;VQSLOD=2.8668;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:53.93:0,54,1523	0/0:12,0:12:12:0,12,344	0/0:27,0:18:44.09:0,44,588	0/0:22,0:14:37.94:0,38,492	0/0:16,0:16:17.65:0,18,107	0/0:12,0:12:26.96:0,27,1021	0/0:38,0:38:89.44:0,89,3926	0/0:13,0:11:31.27:0,31,638	0/0:27,0:27:69.15:0,69,3513	0/0:21,0:20:45.11:0,45,1000	0/0:12,0:9:12.03:0,12,188	0/0:29,0:28:11.86:0,12,621	0/0:11,0:12:26.01:0,26,695	0/0:22,0:22:15.45:0,15,605	1/1:9,18:27:11.25:523,11,0	1/1:8,22:30:17.04:737,17,0	0/0:25,0:25:43.28:0,43,1730	0/0:15,0:15:9.03:0,9,430	0/0:12,0:9:21.12:0,21,544	./.	0/0:34,0:33:21.96:0,22,515	0/0:13,0:12:17.93:0,18,165	0/0:18,0:18:22.18:0,22,315	0/0:31,0:31:12.50:0,12,705	0/0:17,0:17:8.97:0,9,207	0/0:21,0:21:36.90:0,37,781	0/0:18,0:17:15.92:0,16,205	0/0:6,0:6:12.04:0,12,332
chr10	43759520	.	G	GCGCGCGCGCA	2344.09	PASS	AB=0.977;AC=14;AF=0.259;AN=54;BaseQRankSum=7.658;DP=555;FS=0.000;HRun=0;HaplotypeScore=180.9149;InbreedingCoeff=-0.1233;MQ=49.30;MQ0=12;MQRankSum=-4.115;QD=9.09;ReadPosRankSum=1.608;VQSLOD=2.4585;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:54.15:0,54,1357	0/0:8,4:12:8.95:0,9,218	0/0:26,0:17:45.02:0,45,985	0/0:22,0:15:27.18:0,27,872	0/1:16,0:16:0:0,0,0	0/0:12,0:12:27.07:0,27,706	0/0:38,0:38:93.07:0,93,2771	0/0:13,0:11:32.89:0,33,525	0/0:27,0:27:72.21:0,72,2175	0/1:17,0:19:99:274,0,361	0/0:12,0:9:0.06:0,0,26	0/1:30,0:29:38.54:152,0,39	0/0:12,0:12:17.34:0,17,475	0/1:21,0:21:55.48:55,0,286	0/0:22,0:22:14.83:0,15,272	0/0:27,0:27:26.06:0,26,495	0/1:24,0:24:99:234,0,971	1/1:12,0:12:9.03:300,9,0	0/1:12,0:9:66.21:526,0,66	0/0:6,0:8:0:0,0,0	0/1:32,0:31:27.44:27,0,105	./.	0/0:18,0:18:6.01:0,6,115	0/1:32,0:32:69.64:70,0,402	0/1:16,0:16:10.96:114,0,11	0/1:21,0:21:99:449,0,162	0/1:16,0:15:46.85:156,0,47	0/1:5,0:6:81:134,0,81
chr10	43759521	.	T	TTGTGTGTGTGCGCGCGC	5345.60	PASS	AB=0.852;AC=22;AF=0.393;AN=56;BaseQRankSum=9.898;DP=575;FS=6.919;HRun=0;HaplotypeScore=251.0625;InbreedingCoeff=0.0893;MQ=49.97;MQ0=12;MQRankSum=-8.434;QD=17.30;ReadPosRankSum=5.754;VQSLOD=2.2632;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:57.14:0,57,1353	0/1:12,0:12:7.89:234,0,8	0/0:25,0:16:37.37:0,37,996	0/0:22,0:15:34.55:0,35,852	1/1:16,0:16:0.47:1,0,0	0/0:12,0:12:27.07:0,27,787	0/0:39,0:39:91.62:0,92,3167	0/1:13,0:11:0.10:0,0,213	0/0:25,0:25:69.22:0,69,2018	0/1:19,0:18:99:633,0,103	0/0:10,0:8:9.02:0,9,100	0/1:9,1:33:22.97:543,0,23	0/1:10,0:17:93.60:530,0,94	0/1:14,1:33:99:193,0,113	0/0:21,0:21:11.92:0,12,335	0/0:24,0:24:18.97:0,19,655	0/1:24,0:24:99:700,0,271	1/1:12,0:12:9.03:337,9,0	1/1:12,0:9:16.13:413,16,0	1/1:8,0:8:2.59:11,3,0	0/0:30,0:30:5.34:0,5,214	0/1:6,0:14:0:0,0,0	0/0:9,0:20:6.22:0,6,49	0/1:20,0:38:99:391,0,124	0/1:16,0:16:16.02:126,0,16	0/1:18,0:18:54.54:441,0,55	1/1:12,0:15:9.35:592,9,0	0/1:6,0:6:4.84:203,0,5
chr10	43759525	.	T	TGCGTGCGCGCGCGCGCACGCGC	18629.80	PASS	AB=0.975;AC=26;AF=0.464;AN=56;BaseQRankSum=3.573;DP=664;FS=22.094;HRun=0;HaplotypeScore=323.6839;InbreedingCoeff=0.4227;MQ=55.85;MQ0=11;MQRankSum=-9.170;QD=45.55;ReadPosRankSum=2.226;VQSLOD=2.5286;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:57.13:0,57,2298	1/1:16,0:16:17.63:648,18,0	0/0:27,0:19:28.16:0,28,1937	0/0:23,0:16:33.40:0,33,1249	0/0:17,0:17:0.47:0,0,1	0/0:11,0:11:24.07:0,24,1100	0/0:38,0:38:86.73:0,87,4309	0/1:19,0:17:0.52:1331,0,1	0/0:24,0:24:66.13:0,66,2612	1/1:32,0:32:84.11:4486,84,0	1/1:17,0:14:8.93:65,9,0	0/1:24,0:23:76.05:299,0,76	0/1:20,0:20:75.61:280,0,76	0/1:27,0:27:99:107,0,174	0/0:21,0:21:12.41:0,12,406	0/0:24,0:24:19:0,19,812	0/1:21,0:28:99:1860,0,122	1/1:7,4:20:21.03:1534,21,0	1/1:17,0:21:45.87:2273,46,0	0/1:16,0:16:0.04:0,0,0	0/1:49,0:48:0.73:138,0,1	0/0:17,0:16:3.01:0,3,48	0/0:19,0:19:3.21:0,3,27	0/1:34,0:34:99:231,0,131	1/1:7,6:28:3.01:315,3,0	1/1:8,6:24:40.16:2007,40,0	1/1:25,0:24:37.06:2352,37,0	1/1:6,0:6:8.37:702,8,0
chr10	43759533	.	T	TGTGTGC	1164.62	PASS	AB=0.967;AC=17;AF=0.304;AN=56;BaseQRankSum=4.832;DP=640;FS=1.663;HRun=0;HaplotypeScore=219.6047;InbreedingCoeff=-0.1116;MQ=63.79;MQ0=9;MQRankSum=-5.207;QD=3.66;ReadPosRankSum=2.062;VQSLOD=2.7907;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:36,0:36:62.69:615,63,0	0/1:15,0:15:39.73:40,0,56	0/0:30,0:23:59.26:0,59,649	0/0:25,0:20:34.76:0,35,421	0/1:4,11:17:0:0,0,0	0/0:10,0:10:27.01:0,27,327	0/0:40,0:40:75.99:0,76,1055	0/1:25,0:23:25.29:25,0,305	0/0:18,0:18:47.87:0,48,555	0/1:30,0:30:31.32:31,0,394	0/1:18,0:15:14.80:15,0,83	0/1:24,0:23:94.90:187,0,95	0/1:16,0:16:37.10:85,0,37	0/1:23,0:23:33.23:33,0,119	0/0:21,0:21:11.44:0,11,142	0/0:24,0:24:17.59:0,18,235	0/1:25,0:25:24.17:178,0,24	0/1:17,0:17:11.48:11,0,149	0/0:22,0:19:18.83:0,19,273	0/0:16,0:16:5.76:0,6,49	0/0:46,0:45:0.21:0,0,180	0/0:19,0:18:14.98:0,15,124	0/0:17,0:17:0.06:0,0,1	0/0:34,0:34:17.64:0,18,136	1/1:19,0:19:1.59:25,2,0	0/1:17,0:17:52.25:52,0,191	0/1:30,0:29:6.73:7,0,236	0/1:6,0:6:14.25:14,0,34
chr10	43761204	.	A	AG	2470.78	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-12.429;DP=611;FS=0.000;HRun=2;HaplotypeScore=56.4911;InbreedingCoeff=0.9907;MQ=83.01;MQ0=0;MQRankSum=-2.983;QD=36.88;ReadPosRankSum=3.012;VQSLOD=4.1445;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:75.23:0,75,929	0/0:7,0:7:21.07:0,21,260	0/0:24,0:24:66.19:0,66,797	0/0:22,0:21:51.07:0,51,571	0/0:24,0:24:66.21:0,66,818	0/0:30,0:30:90.28:0,90,1116	0/0:27,0:27:72.18:0,72,875	0/0:15,0:15:45.13:0,45,545	0/0:21,1:22:19.97:0,20,687	0/0:17,0:17:48.15:0,48,594	0/0:17,0:17:45.13:0,45,545	0/0:23,0:23:63.20:0,63,781	0/0:23,0:23:66.18:0,66,795	0/0:22,0:22:63.20:0,63,781	1/1:3,34:37:99:1426,99,0	1/1:2,28:29:81.27:1167,81,0	0/0:31,0:31:90.26:0,90,1101	0/0:26,0:26:75.24:0,75,930	0/0:24,0:24:69.22:0,69,853	0/0:12,0:12:36.11:0,36,446	0/0:25,0:26:75.24:0,75,930	0/0:11,0:11:30.09:0,30,372	0/0:11,0:11:33.10:0,33,409	0/0:29,0:29:87.21:0,87,1047	0/0:21,0:21:57.16:0,57,693	0/0:21,0:21:63.20:0,63,781	0/0:24,0:24:72.19:0,72,864	0/0:6,0:6:18.06:0,18,223
chr10	43762608	.	GT	G	2317.85	PASS	AB=0.656;AC=36;AF=0.643;AN=56;BaseQRankSum=-0.624;DP=613;FS=21.602;HRun=14;HaplotypeScore=75.7481;InbreedingCoeff=0.7490;MQ=57.33;MQ0=29;MQRankSum=0.208;QD=6.92;ReadPosRankSum=2.893;VQSLOD=0.8202;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:38.82:0,39,450	0/1:2,6:8:13.07:61,0,13	0/0:75,0:18:2.05:0,2,106	0/0:81,0:17:18.30:0,18,109	0/0:21,1:22:32.05:0,32,390	0/0:16,1:17:27.29:0,27,373	0/0:11,0:11:3.87:0,4,116	1/1:12,1:35:20.35:100,20,0	0/0:14,0:13:25.35:0,25,245	0/1:13,6:18:3.04:110,0,3	1/1:5,11:17:32.96:214,33,0	1/1:4,0:14:18.32:53,18,0	1/1:4,0:11:14.25:41,14,0	1/1:2,1:12:11.11:44,11,0	0/0:15,0:15:26.77:0,27,232	0/0:8,0:8:11.96:0,12,102	1/1:3,18:23:29.07:258,29,0	1/1:8,10:19:21.85:135,22,0	1/1:16,7:20:12:155,12,0	1/1:10,13:24:16.35:271,16,0	1/1:6,5:11:10.03:107,10,0	1/1:6,0:6:0.93:2,1,0	1/1:3,0:13:9.28:27,9,0	1/1:1,0:10:18.33:53,18,0	1/1:8,13:21:32.64:225,33,0	1/1:5,17:21:22.37:285,22,0	1/1:6,22:29:10.33:236,10,0	1/1:3,9:12:20.67:142,21,0
chr10	43762626	.	T	TA	294.13	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-2.842;DP=587;FS=6.591;HRun=0;HaplotypeScore=76.9705;InbreedingCoeff=0.8653;MQ=49.47;MQ0=55;MQRankSum=-0.539;QD=16.34;ReadPosRankSum=-0.055;VQSLOD=5.6882;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:30:71.98:0,72,817	0/0:9,0:9:11.26:0,11,142	0/0:72,0:13:27.83:0,28,195	0/0:77,0:12:27.66:0,28,188	0/0:23,0:23:55.48:0,55,669	0/0:17,0:15:45.07:0,45,552	0/0:10,0:8:21.02:0,21,225	0/0:33,0:27:68.05:0,68,760	0/0:15,0:12:30.02:0,30,373	0/0:16,0:12:33.09:0,33,427	0/0:15,0:14:39.03:0,39,470	0/0:14,0:13:27.09:0,27,363	0/0:13,0:12:27.05:0,27,345	0/0:12,0:11:18.06:0,18,239	1/1:2,10:11:19.58:282,20,0	1/1:1,5:5:9.03:124,9,0	0/0:25,0:23:48.67:0,49,602	0/0:20,0:17:28.33:0,28,368	0/0:23,0:13:35.13:0,35,445	0/0:24,0:24:71.35:0,71,884	0/0:9,0:9:24.07:0,24,318	0/0:1,0:1:1.55:0,2,4	0/0:10,0:10:17.99:0,18,223	0/0:12,0:12:30.05:0,30,394	0/0:21,0:20:42.13:0,42,546	0/0:23,0:21:63.12:0,63,799	0/0:33,0:33:56.54:0,57,765	0/0:10,0:9:21.07:0,21,293
chr10	43764666	.	TA	T	626.82	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.780;DP=625;FS=1.485;HRun=9;HaplotypeScore=63.8885;InbreedingCoeff=0.9613;MQ=72.05;MQ0=1;MQRankSum=-3.498;QD=17.91;ReadPosRankSum=2.412;VQSLOD=3.8988;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,138,1569	0/0:6,0:6:15.04:0,15,173	0/0:17,0:16:33.07:0,33,353	0/0:18,0:16:30.33:0,30,294	0/0:20,0:20:60.17:0,60,684	0/0:35,0:35:99:0,99,1142	0/0:27,0:27:63.15:0,63,705	0/0:24,0:24:57.08:0,57,637	0/0:29,0:29:72.20:0,72,820	0/0:24,0:24:57.14:0,57,629	0/0:19,0:20:56.93:0,57,620	0/0:17,0:17:45.13:0,45,516	0/0:16,0:16:33.10:0,33,380	0/0:22,0:22:54.16:0,54,623	1/1:0,14:14:36.02:329,36,0	1/1:2,19:21:30.22:419,30,0	0/0:37,1:38:83.82:0,84,1184	0/0:26,0:26:75.22:0,75,865	0/0:27,0:27:69.18:0,69,772	0/0:17,0:17:42.12:0,42,484	0/0:24,0:24:54.15:0,54,613	0/0:22,1:23:32.68:0,33,606	0/0:9,0:9:27.08:0,27,311	0/0:26,1:27:50.77:0,51,838	0/0:16,0:16:30.06:0,30,325	0/0:31,0:31:72.20:0,72,823	0/0:21,0:21:57.17:0,57,657	0/0:3,0:3:9.01:0,9,92
chr10	43767976	.	GA	G	81.86	PASS	AB=0.632;AC=3;AF=0.056;AN=54;BaseQRankSum=1.310;DP=322;FS=0.000;HRun=9;HaplotypeScore=63.4865;InbreedingCoeff=0.2641;MQ=37.06;MQ0=30;MQRankSum=-3.481;QD=4.09;ReadPosRankSum=2.167;VQSLOD=-0.3909;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:16:15.02:0,15,160	0/0:7,0:7:3.01:0,3,35	./.	0/0:7,0:2:2.99:0,3,23	0/0:11,0:11:10.80:0,11,108	0/0:9,0:8:15.01:0,15,145	0/0:8,0:7:11.79:0,12,117	0/0:17,0:15:30.06:0,30,331	0/0:4,0:2:3:0,3,25	0/0:14,1:14:5.40:0,5,256	0/0:13,0:11:20.96:0,21,200	0/0:10,0:10:22.48:0,22,192	0/0:8,0:7:8.75:0,9,65	0/0:4,0:4:6.02:0,6,69	1/1:4,4:7:12:110,12,0	0/1:5,7:9:22.61:70,0,23	0/0:28,0:22:34.44:0,34,293	0/0:23,0:16:22.77:0,23,187	0/0:13,0:12:30.06:0,30,332	0/0:12,0:12:12.89:0,13,122	0/0:9,0:7:5.46:0,5,29	0/0:8,0:8:12.04:0,12,138	0/0:7,0:6:9.03:0,9,104	0/0:9,0:4:5.23:0,5,42	0/0:12,0:12:29.94:0,30,292	0/0:23,0:23:29.93:0,30,303	0/0:15,0:14:24.10:0,24,209	0/0:8,0:5:6.02:0,6,69
chr10	43768012	.	AAAT	A	194.06	PASS	AB=0.951;AC=9;AF=0.161;AN=56;BaseQRankSum=4.747;DP=418;FS=4.721;HRun=0;HaplotypeScore=64.8438;InbreedingCoeff=-0.1973;MQ=46.40;MQ0=40;MQRankSum=-6.733;QD=1.42;ReadPosRankSum=3.612;VQSLOD=0.7648;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:19:4.22:0,4,181	0/0:4,0:4:1.43:0,1,22	0/0:48,0:7:20.78:0,21,167	0/0:54,0:9:17.83:0,18,152	0/0:17,0:16:17.64:0,18,240	0/0:16,0:14:20:0,20,317	0/0:7,0:6:3.79:0,4,75	0/0:19,0:17:23.96:0,24,322	0/0:6,0:4:8.99:0,9,99	0/1:14,1:13:27.40:27,0,98	0/1:16,0:14:23.27:23,0,65	0/0:5,0:5:14.95:0,15,196	0/0:9,0:8:7.62:0,8,99	0/0:4,0:3:8.22:0,8,75	0/0:10,0:9:12.14:0,12,148	0/1:11,0:8:9.17:9,0,75	0/1:31,0:26:34.06:42,0,34	0/0:22,0:16:2.15:0,2,96	0/1:17,0:15:53.70:54,0,95	0/0:12,0:11:6.74:0,7,102	0/1:2,1:3:9.84:25,0,10	0/0:4,0:4:11.60:0,12,71	0/0:4,0:3:5.23:0,5,60	0/0:10,0:6:14.90:0,15,138	0/1:11,1:11:23.88:24,0,46	0/1:17,1:17:27.30:74,0,27	0/1:14,0:14:48.41:48,0,64	0/0:7,1:4:0.47:0,0,1
chr10	43768119	.	G	GA	3788.86	PASS	AB=0.850;AC=33;AF=0.589;AN=56;BaseQRankSum=-7.814;DP=414;FS=10.587;HRun=12;HaplotypeScore=48.3758;InbreedingCoeff=0.4680;MQ=75.83;MQ0=3;MQRankSum=-1.016;QD=11.38;ReadPosRankSum=0.230;VQSLOD=1.8938;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,28:29:45.07:438,45,0	1/1:2,3:5:9.01:88,9,0	0/1:22,0:17:10.40:10,0,52	0/1:24,0:17:7.36:7,0,51	1/1:0,7:7:18.50:176,19,0	0/0:7,0:8:13.93:0,14,93	0/0:15,0:14:26.82:0,27,195	1/1:8,20:28:38.26:478,38,0	0/0:8,0:9:10.94:0,11,71	1/1:3,13:16:39.06:379,39,0	0/1:3,3:7:7.05:87,0,7	0/0:11,0:11:25.10:0,25,178	0/1:7,1:10:15.49:15,0,57	0/1:6,2:8:11.24:11,0,91	0/0:2,0:20:28.50:0,29,84	0/0:6,0:11:13.15:0,13,52	1/1:7,28:34:48.08:467,48,0	1/1:6,18:24:24.04:234,24,0	0/1:7,5:13:10.27:179,0,10	1/1:1,6:7:18.03:175,18,0	1/1:2,7:9:2.13:182,2,0	0/0:5,0:5:11.92:0,12,87	0/0:2,0:2:2.97:0,3,22	0/1:30,3:35:2.49:2,0,453	1/1:1,17:18:33.05:321,33,0	1/1:1,10:12:24.35:242,24,0	1/1:2,17:20:24.57:221,25,0	1/1:3,0:3:8.98:75,9,0
chr10	43768362	.	T	TA	1679.46	PASS	AB=0.889;AC=18;AF=0.321;AN=56;BaseQRankSum=6.280;DP=569;FS=0.903;HRun=11;HaplotypeScore=114.4710;InbreedingCoeff=0.7424;MQ=63.50;MQ0=7;MQRankSum=-4.082;QD=8.79;ReadPosRankSum=-1.790;VQSLOD=2.2849;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:40:83.96:0,84,622	1/1:1,7:8:21.04:212,21,0	0/1:20,0:12:2.80:3,0,39	0/0:16,0:16:12.73:0,13,100	0/0:26,0:27:56.51:0,57,425	0/0:21,2:23:15.15:0,15,314	0/0:24,0:25:67.70:0,68,511	0/0:19,0:19:44.78:0,45,347	0/0:9,0:10:25.94:0,26,191	0/0:22,0:22:50.68:0,51,388	0/0:21,0:21:44.64:0,45,347	1/1:12,5:16:17.87:146,18,0	1/1:12,2:13:22.75:161,23,0	1/1:10,8:17:41.71:342,42,0	0/1:25,0:25:26.35:26,0,30	0/1:18,0:18:6.40:27,0,6	0/1:4,16:20:1.38:351,0,1	0/0:21,0:21:43.71:0,44,346	0/0:17,0:16:38.82:0,39,297	0/0:20,0:20:47.72:0,48,371	0/0:22,0:22:53.79:0,54,417	1/1:11,7:17:22.86:214,23,0	1/1:2,8:9:26.42:171,26,0	1/1:17,5:21:23.77:226,24,0	0/0:26,0:26:65.70:0,66,510	0/0:25,0:24:62.76:0,63,486	0/0:34,0:34:83.64:0,84,649	0/0:9,0:9:20.91:0,21,162
chr10	43768373	.	AC	A	2141.77	PASS	AB=0.952;AC=17;AF=0.304;AN=56;BaseQRankSum=13.563;DP=581;FS=5.245;HRun=1;HaplotypeScore=113.0605;InbreedingCoeff=0.9129;MQ=64.67;MQ0=9;MQRankSum=-7.382;QD=13.39;ReadPosRankSum=-4.104;VQSLOD=1.2376;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:84.27:0,84,1136	0/0:8,0:8:23.46:0,23,144	0/0:26,1:18:21.27:0,21,224	0/1:19,1:16:20.62:21,0,169	0/0:27,0:27:74.89:0,75,829	0/0:21,1:22:34.50:0,35,642	0/0:28,0:28:80.82:0,81,868	0/0:23,0:23:53.16:0,53,668	0/0:15,0:15:41.99:0,42,431	0/0:19,0:19:57.15:0,57,640	0/0:21,0:21:50.91:0,51,539	1/1:17,0:16:34.14:207,34,0	1/1:15,0:14:31.58:163,32,0	1/1:19,0:18:43.74:370,44,0	1/1:17,7:24:69.68:571,70,0	1/1:13,3:16:39.99:376,40,0	0/0:21,0:21:55.94:0,56,388	0/0:20,0:20:17.91:0,18,545	0/0:20,0:18:54.07:0,54,546	0/0:20,0:20:57:0,57,619	0/0:18,0:18:54.16:0,54,620	1/1:18,0:17:32.70:222,33,0	1/1:10,0:9:26.84:207,27,0	1/1:21,0:20:33.77:215,34,0	0/0:25,0:25:69.20:0,69,797	0/0:26,0:25:75.15:0,75,819	0/0:36,0:36:99:0,108,1159	0/0:7,0:7:21.06:0,21,241
chr10	43768376	.	AAC	A	2581.32	PASS	AB=0.947;AC=17;AF=0.304;AN=56;BaseQRankSum=13.642;DP=578;FS=2.302;HRun=0;HaplotypeScore=122.7895;InbreedingCoeff=0.7885;MQ=65.50;MQ0=9;MQRankSum=-3.559;QD=13.66;ReadPosRankSum=-3.666;VQSLOD=3.0964;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,104,1875	0/0:8,0:8:24.08:0,24,452	0/1:26,2:19:19.86:20,0,502	0/1:18,2:16:66.86:67,0,340	0/0:26,0:26:75.21:0,75,1337	0/0:22,0:22:63.17:0,63,1138	0/0:24,0:24:72.25:0,72,1335	0/0:25,0:25:59.02:0,59,1178	0/0:16,0:16:48.14:0,48,834	0/0:19,0:19:57.19:0,57,1032	0/0:20,0:20:51.04:0,51,917	1/1:8,10:17:44.82:496,45,0	1/1:6,8:13:31.35:396,31,0	1/1:7,10:16:39.27:485,39,0	0/1:24,0:24:0.29:102,0,0	1/1:18,0:18:17.68:132,18,0	0/0:20,0:20:57.18:0,57,1040	0/0:21,0:21:36.34:0,36,983	0/0:19,0:17:51.17:0,51,913	0/0:20,0:20:57.17:0,57,1010	0/0:18,0:18:51.16:0,51,930	1/1:7,12:18:25.26:423,25,0	1/1:3,8:10:30.04:295,30,0	1/1:14,6:19:29.04:368,29,0	0/0:25,0:25:69.22:0,69,1276	0/0:28,0:27:81.27:0,81,1425	0/0:36,0:36:99:0,105,1949	0/0:7,0:7:21.07:0,21,398
chr10	43768377	.	AC	A	2510.51	PASS	AB=0.944;AC=18;AF=0.321;AN=56;BaseQRankSum=14.611;DP=577;FS=0.375;HRun=1;HaplotypeScore=112.7719;InbreedingCoeff=0.8388;MQ=66.36;MQ0=9;MQRankSum=-5.627;QD=13.64;ReadPosRankSum=-4.231;VQSLOD=1.3177;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,104,1523	0/0:8,0:8:24.08:0,24,364	0/1:28,2:21:12.82:13,0,390	0/1:18,1:15:56.59:57,0,252	0/0:27,0:27:78.21:0,78,1132	0/0:22,0:22:60.06:0,60,888	0/0:24,0:24:72.23:0,72,1073	0/0:26,0:26:51.24:0,51,953	0/0:16,0:16:48.08:0,48,659	0/0:19,0:19:57.10:0,57,825	0/0:20,0:20:51.04:0,51,737	1/1:16,2:17:44.98:475,45,0	1/1:13,1:13:38.64:384,39,0	1/1:15,0:14:39.08:426,39,0	1/1:23,1:24:45.98:247,46,0	1/1:18,0:18:33.96:177,34,0	0/0:21,0:21:57.18:0,57,845	0/0:22,0:22:30.06:0,30,813	0/0:20,0:18:54.16:0,54,770	0/0:20,0:20:56.82:0,57,787	0/0:18,0:18:51.16:0,51,756	1/1:17,0:16:36.89:379,37,0	1/1:11,0:10:30.02:290,30,0	1/1:17,1:17:29.37:273,29,0	0/0:25,0:25:69.22:0,69,1033	0/0:28,0:27:81.16:0,81,1149	0/0:35,0:35:99:0,105,1594	0/0:7,0:7:21.07:0,21,321
chr10	43768382	.	C	CA	1558.66	PASS	AB=1.000;AC=14;AF=0.250;AN=56;BaseQRankSum=9.315;DP=584;FS=0.443;HRun=9;HaplotypeScore=115.8806;InbreedingCoeff=0.8069;MQ=67.17;MQ0=9;MQRankSum=-5.633;QD=11.29;ReadPosRankSum=-4.017;VQSLOD=1.9599;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:85.51:0,86,733	0/0:8,0:8:20.99:0,21,182	0/0:28,0:21:35.67:0,36,381	0/0:17,0:15:36.34:0,36,291	0/0:27,0:27:68.96:0,69,599	0/0:22,0:22:59.96:0,60,517	0/0:24,0:24:57.22:0,57,547	0/0:27,0:28:53.35:0,53,503	0/0:15,0:15:38.98:0,39,338	0/0:21,0:21:47.97:0,48,416	0/0:20,0:20:50.83:0,51,441	1/1:11,8:18:40.72:347,41,0	1/1:7,8:14:38.32:317,38,0	1/1:11,5:15:23.81:189,24,0	0/1:22,0:22:37.35:37,0,126	0/1:17,0:17:48.53:83,0,49	0/0:25,0:25:59.97:0,60,520	0/0:20,0:20:38.97:0,39,338	0/0:19,0:17:44.98:0,45,388	0/0:21,0:21:50.97:0,51,442	0/0:16,0:16:38.98:0,39,338	1/1:10,9:18:36.61:324,37,0	1/1:4,8:11:30.26:232,30,0	1/1:12,6:17:23.53:222,24,0	0/0:25,1:26:26.78:0,27,461	0/0:29,0:28:65.92:0,66,565	0/0:34,0:34:92.89:0,93,791	0/0:7,0:7:21:0,21,182
chr10	43768698	.	CT	C	918.67	PASS	AB=0.825;AC=22;AF=0.393;AN=56;BaseQRankSum=1.380;DP=440;FS=3.137;HRun=15;HaplotypeScore=55.4845;InbreedingCoeff=0.1298;MQ=60.98;MQ0=20;MQRankSum=0.297;QD=3.88;ReadPosRankSum=0.650;VQSLOD=0.3428;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,3:36:1.48:0,1,421	0/0:7,0:8:12.06:0,12,81	0/0:28,0:15:7.92:0,8,56	0/0:26,0:9:1.97:0,2,25	0/1:21,2:25:25.72:26,0,158	0/1:12,4:16:27.93:28,0,141	0/0:17,1:17:3.22:0,3,183	0/1:22,2:23:15.54:16,0,131	0/0:12,1:13:13.46:0,13,208	1/1:3,10:12:5.46:154,5,0	1/1:4,4:8:8.85:58,9,0	0/1:14,1:14:7.91:8,0,174	0/0:12,0:11:20.97:0,21,178	0/0:9,2:11:2.25:0,2,96	1/1:2,0:2:2.80:7,3,0	0/1:9,0:9:4.20:4,0,8	0/0:6,0:24:35.10:0,35,205	1/1:7,14:21:15.77:213,16,0	0/1:12,6:19:15.67:108,0,16	1/1:7,7:14:11.66:77,12,0	0/0:5,0:5:0:0,0,0	0/1:13,2:15:13.71:14,0,122	0/0:9,0:9:20.84:0,21,172	0/0:9,0:9:9:0,9,79	0/1:6,10:16:11.10:62,0,11	0/1:7,3:11:11.62:62,0,12	0/1:9,4:12:3.82:96,0,4	1/1:1,8:9:23.65:154,24,0
chr10	43771684	.	CA	C	993.97	PASS	AB=0.911;AC=26;AF=0.464;AN=56;BaseQRankSum=-0.867;DP=375;FS=5.920;HRun=9;HaplotypeScore=56.7288;InbreedingCoeff=0.2913;MQ=56.39;MQ0=49;MQRankSum=-1.929;QD=4.64;ReadPosRankSum=1.366;VQSLOD=0.0649;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:19:43.32:0,43,379	0/1:6,4:9:14.63:15,0,60	0/0:78,0:12:7.82:0,8,108	0/1:68,0:10:1.31:1,0,49	0/0:14,0:13:10.87:0,11,116	0/0:5,0:5:11.96:0,12,108	0/0:5,0:4:11.98:0,12,113	0/1:13,0:12:2.92:101,0,3	0/0:8,0:8:18.03:0,18,192	0/1:10,1:10:29.93:54,0,30	0/1:9,2:11:19.27:33,0,19	0/1:4,0:4:2.11:18,0,2	0/0:4,0:2:5.74:0,6,30	0/1:7,0:7:7.91:8,0,19	1/1:1,2:3:3.32:49,3,0	1/1:2,5:6:12:107,12,0	0/1:13,4:17:4.63:175,0,5	1/1:8,1:9:2.72:69,3,0	1/1:6,2:8:11.87:99,12,0	0/0:5,1:2:5.54:0,6,26	1/1:7,1:7:8.90:70,9,0	0/0:2,0:2:0:0,0,0	0/0:5,0:5:6.45:0,6,20	0/0:14,0:14:0.16:0,0,32	1/1:6,2:8:1.36:98,1,0	1/1:10,0:10:14.72:103,15,0	1/1:5,6:10:17.95:151,18,0	1/1:9,0:3:2.39:13,2,0
chr10	43774268	.	TGACA	T	5941.19	PASS	AC=26;AF=0.481;AN=54;BaseQRankSum=7.672;DP=468;FS=1.727;HRun=0;HaplotypeScore=86.4326;InbreedingCoeff=0.9345;MQ=65.21;MQ0=7;MQRankSum=-0.063;QD=25.83;ReadPosRankSum=2.860;VQSLOD=4.6205;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:24:27.03:0,27,410	1/1:4,7:11:12.04:190,12,0	0/0:19,0:6:5.77:0,6,33	./.	0/0:7,0:24:29.10:0,29,423	0/0:16,0:16:36.10:0,36,744	0/0:10,0:10:27.09:0,27,597	0/0:33,0:33:33.09:0,33,679	0/0:10,0:10:21.05:0,21,452	1/1:6,12:18:33.11:517,33,0	1/1:5,10:15:18.06:285,18,0	0/0:15,0:15:36.08:0,36,739	0/0:13,0:13:33.11:0,33,733	0/0:16,0:16:15.15:0,15,765	1/1:4,13:17:33.11:522,33,0	1/1:3,7:10:18.06:285,18,0	1/1:6,14:20:27.09:427,27,0	1/1:9,12:21:2.01:488,2,0	1/1:12,12:23:36.09:567,36,0	1/1:7,17:24:48.16:760,48,0	1/1:2,15:16:33.11:522,33,0	0/0:8,0:8:11.32:0,11,233	0/0:14,0:14:27.07:0,27,551	0/0:10,0:10:24.08:0,24,569	1/1:4,17:21:39.13:617,39,0	0/0:11,0:11:12.04:0,12,267	1/1:10,16:26:30.10:475,30,0	1/1:0,6:6:18.06:285,18,0
chr10	43775429	.	TACAC	T	6232.29	PASS	AB=0.564;AC=13;AF=0.232;AN=56;BaseQRankSum=3.648;DP=792;FS=14.090;HRun=0;HaplotypeScore=153.3755;InbreedingCoeff=0.8682;MQ=64.50;MQ0=8;MQRankSum=2.515;QD=34.82;ReadPosRankSum=2.950;VQSLOD=3.9487;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,99,2197	0/0:8,0:8:20.81:0,21,428	0/0:38,0:20:23.66:0,24,257	0/0:41,0:31:28.81:0,29,340	0/0:24,0:25:53.87:0,54,1123	0/0:17,0:19:50.65:0,51,919	0/0:40,0:40:99:0,99,1994	0/0:10,0:22:51.08:0,51,688	0/0:25,0:26:65.51:0,66,1462	0/0:30,0:29:72.03:0,72,1615	0/0:12,0:12:30.09:0,30,642	1/1:10,18:28:68.84:1091,69,0	1/1:5,12:17:42.13:675,42,0	1/1:11,17:28:72.23:1159,72,0	0/0:4,0:17:3.09:0,3,34	0/1:5,1:21:21.76:47,0,22	0/0:38,0:40:99:0,99,2086	0/0:21,0:21:57.11:0,57,1151	0/0:23,0:20:36.11:0,36,779	0/0:22,0:25:53.37:0,53,1051	0/0:85,0:90:99:0,208,4321	1/1:6,5:11:29.27:387,29,0	1/1:7,14:21:51.16:831,51,0	1/1:26,26:52:99:2043,138,0	0/0:31,0:31:78.24:0,78,1783	0/0:25,0:27:62.14:0,62,1175	0/0:20,0:21:44.87:0,45,911	0/0:11,0:11:30.06:0,30,611
chr10	43775524	.	GCACA	G	18829.19	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=7.538;DP=741;FS=0.444;HRun=0;HaplotypeScore=164.1118;InbreedingCoeff=0.9812;MQ=56.91;MQ0=8;MQRankSum=1.893;QD=32.30;ReadPosRankSum=2.982;VQSLOD=4.6680;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,36:36:84.29:1460,84,0	1/1:1,19:20:47.66:771,48,0	0/0:43,0:15:29.93:0,30,543	0/0:46,0:20:31.11:0,31,604	1/1:1,22:23:45.11:782,45,0	0/0:18,0:18:50.51:0,51,1130	0/0:27,0:28:69.01:0,69,1638	1/1:1,15:15:42.01:607,42,0	0/0:21,0:21:53.97:0,54,1271	1/1:4,32:36:95.97:1499,96,0	1/1:1,13:15:21.02:365,21,0	1/1:3,22:25:54.18:935,54,0	1/1:4,14:18:30.10:518,30,0	1/1:4,17:21:39.13:678,39,0	1/1:2,18:20:51.17:881,51,0	1/1:2,11:13:33.11:572,33,0	1/1:3,41:44:64.90:1291,65,0	1/1:4,32:36:69.14:1430,69,0	1/1:3,14:16:35.83:470,36,0	1/1:0,17:17:30.10:522,30,0	1/1:20,53:74:64.56:1099,65,0	1/1:2,11:13:9.03:157,9,0	1/1:2,15:17:27.09:469,27,0	1/1:3,39:42:90.31:1565,90,0	1/1:6,25:31:47.88:832,48,0	1/1:4,22:27:63.11:936,63,0	1/1:0,16:16:42.14:728,42,0	1/1:1,5:6:15.05:261,15,0
chr10	43775592	.	T	TAAAAC	3035.70	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=-5.756;DP=715;FS=21.697;HRun=0;HaplotypeScore=179.4231;InbreedingCoeff=0.8249;MQ=66.43;MQ0=2;MQRankSum=-2.083;QD=37.95;ReadPosRankSum=0.572;VQSLOD=2.0336;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,103,1882	0/0:18,0:18:33.01:0,33,527	0/0:21,0:18:8.47:0,8,196	0/1:24,0:18:1.81:2,0,212	0/0:21,0:21:54.15:0,54,960	0/0:17,0:17:36.12:0,36,683	0/0:24,0:24:60.16:0,60,1041	0/0:34,0:34:66.15:0,66,1112	0/0:18,0:18:37.30:0,37,641	0/0:35,0:35:90.25:0,90,1611	0/0:15,0:15:24.05:0,24,392	0/0:24,0:24:51.14:0,51,881	0/0:21,0:21:42.14:0,42,791	0/0:15,0:15:18.05:0,18,310	1/1:10,15:25:48.10:1310,48,0	1/1:7,20:31:66.23:1846,66,0	0/0:37,0:37:70.34:0,70,1179	0/0:34,0:34:73.88:0,74,1311	0/0:18,0:18:39.13:0,39,710	0/0:21,0:21:45.09:0,45,783	0/0:33,0:33:51.17:0,51,968	0/0:19,0:19:51.07:0,51,895	0/0:19,0:19:39.12:0,39,708	0/0:33,0:33:69.21:0,69,1231	0/0:33,0:33:60.05:0,60,989	0/0:39,0:39:84.18:0,84,1424	0/0:34,0:33:63.20:0,63,1147	0/0:7,0:7:18.06:0,18,331
chr10	43777306	.	G	GAA	4733.76	PASS	AB=0.662;AC=24;AF=0.429;AN=56;BaseQRankSum=-0.691;DP=597;FS=1.705;HRun=13;HaplotypeScore=81.8318;InbreedingCoeff=0.8667;MQ=68.20;MQ0=3;MQRankSum=0.543;QD=16.05;ReadPosRankSum=-0.853;VQSLOD=3.9335;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:24,1:33:3.05:3,0,409	0/1:1,0:7:12.93:53,0,13	0/0:28,0:18:11.17:0,11,67	0/0:22,0:12:11.52:0,12,84	0/0:22,0:22:53.35:0,53,432	0/0:23,0:24:58.78:0,59,478	0/0:16,0:17:29.70:0,30,307	0/0:23,0:25:31.24:0,31,327	0/0:14,0:15:29.29:0,29,282	1/1:7,17:26:54.58:624,55,0	1/1:6,11:22:40.98:426,41,0	0/0:19,0:19:36.23:0,36,349	0/0:19,0:20:38.73:0,39,382	0/0:20,0:20:31.26:0,31,267	0/0:23,0:25:50.70:0,51,484	0/0:17,0:17:35.96:0,36,317	1/1:8,1:26:27.61:212,28,0	1/1:3,10:13:18.06:245,18,0	1/1:5,15:26:56.81:601,57,0	1/1:9,15:27:44.45:473,44,0	1/1:0,9:12:16.52:148,17,0	0/0:14,0:15:31.80:0,32,244	0/0:20,0:22:41.48:0,41,393	0/0:9,0:9:23.94:0,24,211	1/1:5,22:30:56.15:683,56,0	1/1:12,21:36:65.51:742,66,0	1/1:6,15:20:17.54:201,18,0	1/1:5,9:16:27.04:323,27,0
chr10	43778810	.	C	CT	4541.21	PASS	AB=0.600;AC=33;AF=0.589;AN=56;BaseQRankSum=-7.801;DP=422;FS=5.611;HRun=12;HaplotypeScore=52.2058;InbreedingCoeff=0.8987;MQ=71.40;MQ0=2;MQRankSum=-0.201;QD=17.67;ReadPosRankSum=-0.290;VQSLOD=5.8748;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:51.47:0,51,367	0/0:4,0:4:11.93:0,12,88	0/0:13,0:10:22.11:0,22,130	0/0:20,0:15:19.65:0,20,148	0/0:20,0:22:43.60:0,44,303	0/0:12,0:14:31.80:0,32,220	0/0:10,0:10:17.88:0,18,130	1/1:6,9:15:27.04:263,27,0	0/0:9,0:10:19.93:0,20,137	1/1:5,19:24:48.08:467,48,0	1/1:4,20:24:38.13:519,38,0	1/1:2,13:16:38.90:364,39,0	1/1:3,10:13:24.04:233,24,0	1/1:5,4:9:12.02:116,12,0	0/0:15,0:15:34.01:0,34,243	0/0:9,0:9:23.86:0,24,175	0/0:20,0:19:41.67:0,42,301	1/1:6,18:24:7.26:386,7,0	1/1:5,11:17:19.41:293,19,0	1/1:7,11:19:32.74:276,33,0	1/1:1,3:4:9.01:88,9,0	1/1:3,5:8:12.02:117,12,0	1/1:0,9:8:17.95:163,18,0	1/1:1,6:7:8.18:111,8,0	1/1:4,12:16:28.16:314,28,0	1/1:8,18:27:49.72:451,50,0	1/1:5,10:15:26.99:253,27,0	0/1:3,6:9:3.88:128,0,4
chr10	43779377	.	AC	A	2052.80	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.052;DP=610;FS=0.000;HRun=1;HaplotypeScore=60.7020;InbreedingCoeff=0.9731;MQ=74.53;MQ0=1;MQRankSum=-0.394;QD=35.39;ReadPosRankSum=3.971;VQSLOD=3.6703;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:53.06:0,53,1197	0/0:8,0:8:24.06:0,24,323	0/0:26,0:24:66.52:0,67,718	0/0:14,0:10:9.73:0,10,191	0/0:9,0:9:27.08:0,27,368	0/0:18,0:18:54.16:0,54,736	0/0:24,0:24:72.16:0,72,932	0/0:34,0:34:93.18:0,93,1184	0/0:21,0:21:60.13:0,60,815	0/0:31,0:31:90.27:0,90,1220	0/0:20,0:20:57.17:0,57,794	0/0:27,0:27:81.24:0,81,1114	0/0:25,0:25:75.22:0,75,1032	0/0:22,0:22:66.17:0,66,886	1/1:0,36:36:96.32:1338,96,0	1/1:0,22:22:60.20:837,60,0	0/0:32,0:32:96.26:0,96,1309	0/0:26,0:26:75.20:0,75,1010	0/0:23,0:23:66.21:0,66,925	0/0:13,0:13:39.11:0,39,537	0/0:24,0:24:72.21:0,72,989	0/0:16,0:16:48.14:0,48,664	0/0:15,0:15:45.13:0,45,616	0/0:27,0:27:81.23:0,81,1115	0/0:14,0:14:42.12:0,42,580	0/0:13,0:13:39.12:0,39,541	0/0:24,0:23:72.10:0,72,986	0/0:14,0:14:42.12:0,42,579
chr10	43782048	.	TCAAA	T	11285.47	PASS	AB=1.000;AC=51;AF=0.911;AN=56;BaseQRankSum=3.765;DP=745;FS=0.689;HRun=0;HaplotypeScore=171.3456;InbreedingCoeff=0.5955;MQ=74.29;MQ0=7;MQRankSum=-0.549;QD=16.84;ReadPosRankSum=2.361;VQSLOD=4.6391;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:45,0:45:74.47:74,0,1097	1/1:13,0:13:21.44:182,21,0	0/0:38,0:25:6:0,6,62	0/0:37,0:30:3:0,3,25	1/1:29,0:34:44.99:607,45,0	1/1:11,13:24:27.09:420,27,0	1/1:14,8:22:18.06:280,18,0	1/1:26,0:32:8.49:75,8,0	1/1:15,14:29:36.12:560,36,0	1/1:25,0:34:60.10:747,60,0	1/1:23,0:23:36.06:443,36,0	1/1:20,0:20:27.03:351,27,0	1/1:23,0:23:39.09:541,39,0	1/1:19,0:19:24.04:308,24,0	1/1:20,0:20:29.76:260,30,0	1/1:22,0:22:42.04:388,42,0	1/1:21,0:21:24.91:259,25,0	1/1:21,0:21:17.92:143,18,0	1/1:19,0:18:21.05:269,21,0	1/1:26,0:30:53.97:806,54,0	1/1:34,0:34:33.11:513,33,0	1/1:16,0:21:32.87:394,33,0	1/1:24,0:24:36.02:467,36,0	1/1:36,0:36:60.14:827,60,0	1/1:30,0:30:42.12:612,42,0	1/1:30,0:30:62.20:843,62,0	1/1:35,0:35:51.10:684,51,0	1/1:9,0:9:20.96:232,21,0
chr10	43782077	.	CAAACAAACAAACA	C	2096.83	PASS	AB=0.769;AC=3;AF=0.054;AN=56;BaseQRankSum=7.984;DP=723;FS=5.253;HRun=0;HaplotypeScore=350.1675;InbreedingCoeff=-0.0659;MQ=55.34;MQ0=5;MQRankSum=-7.557;QD=29.53;ReadPosRankSum=3.925;VQSLOD=1.4637;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,147,5914	0/0:16,0:16:0.90:0,1,262	0/0:15,0:7:21.06:0,21,359	0/0:25,0:15:39.08:0,39,548	0/0:32,0:32:89.88:0,90,1501	0/0:28,0:28:69.22:0,69,1835	0/0:15,0:15:33.11:0,33,896	0/0:31,0:31:83.20:0,83,790	0/0:30,0:30:78.25:0,78,2168	0/0:34,0:34:98.06:0,98,1726	0/0:26,0:26:68.77:0,69,1201	0/0:21,0:21:62.77:0,63,1128	0/0:20,0:20:59.83:0,60,1120	0/0:22,0:22:62.80:0,63,1116	0/1:11,10:21:76.24:959,0,76	0/1:9,13:22:99:1199,0,110	0/0:21,0:21:40.47:0,40,347	0/1:28,0:28:38.82:39,0,664	0/0:21,0:19:56.76:0,57,813	0/0:32,0:32:96.11:0,96,2199	0/0:30,0:30:83.90:0,84,1748	0/0:23,0:23:65.78:0,66,1103	0/0:25,0:25:72.11:0,72,1288	0/0:39,0:39:99:0,108,2210	0/0:23,0:23:62.98:0,63,1182	0/0:34,0:34:97.66:0,98,2089	0/0:29,0:29:87.01:0,87,1731	0/0:10,0:10:23.64:0,24,506
chr10	43782085	.	CAAA	C	6281.75	PASS	AB=0.834;AC=27;AF=0.482;AN=56;BaseQRankSum=16.527;DP=718;FS=2.729;HRun=3;HaplotypeScore=187.8553;InbreedingCoeff=-0.6282;MQ=56.42;MQ0=5;MQRankSum=-1.287;QD=10.15;ReadPosRankSum=9.769;VQSLOD=0.5380;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:95.70:0,96,2095	0/1:9,0:15:57.28:70,0,57	0/0:24,0:15:45.13:0,45,603	0/0:22,0:14:39.09:0,39,497	0/1:16,11:27:53.66:357,0,54	0/1:24,0:24:15.54:16,0,374	0/1:15,0:15:11.53:12,0,212	0/1:28,0:27:58.72:59,0,150	0/1:31,0:31:17.10:17,0,502	0/1:32,9:42:89.21:451,0,89	0/1:16,7:23:27.07:292,0,27	0/1:18,6:24:75.78:229,0,76	1/1:14,8:22:2.39:430,2,0	0/1:18,3:21:79.30:225,0,79	0/1:20,0:20:58.80:177,0,59	0/1:22,0:22:47.75:140,0,48	0/1:16,0:22:43.15:169,0,43	0/1:22,0:24:73.44:73,0,102	0/1:17,4:20:99:134,0,135	0/1:18,15:33:50.95:513,0,51	0/1:21,9:30:99:327,0,119	0/1:19,6:25:85.42:185,0,85	0/1:17,6:23:51.90:293,0,52	0/1:20,14:34:1.89:615,0,2	1/1:7,11:18:2.05:415,2,0	0/1:21,13:35:61.93:537,0,62	0/1:20,10:31:50.57:418,0,51	0/1:6,3:9:0.42:128,0,0
chr10	43782089	.	CA	C	1678.44	PASS	AB=0.798;AC=19;AF=0.339;AN=56;BaseQRankSum=15.516;DP=730;FS=2.166;HRun=3;HaplotypeScore=178.9577;InbreedingCoeff=-0.5272;MQ=56.61;MQ0=5;MQRankSum=-2.170;QD=3.50;ReadPosRankSum=8.723;VQSLOD=-0.3746;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,101,892	0/1:16,0:16:11.21:11,0,122	0/0:28,0:18:51.14:0,51,682	0/0:21,0:14:39.09:0,39,500	0/1:17,11:28:99:113,0,153	0/0:24,0:24:44.32:0,44,484	0/0:16,0:16:31.14:0,31,314	0/0:32,0:31:35.63:0,36,348	0/0:31,0:31:60.10:0,60,653	0/1:34,9:43:99:102,0,287	0/1:15,7:22:56.83:57,0,119	0/1:17,6:23:63.66:64,0,174	0/1:12,8:20:53.79:130,0,54	0/1:17,3:20:40.84:41,0,173	0/1:19,0:19:50.16:50,0,123	0/1:23,0:23:87.04:87,0,102	0/0:21,0:21:1.08:0,1,177	0/0:23,0:23:20.46:0,20,242	0/1:19,4:22:13.78:14,0,247	0/1:18,15:33:99:169,0,156	0/1:23,9:32:99:140,0,218	0/1:21,6:27:39.42:39,0,186	0/1:16,6:22:75.84:76,0,154	0/1:18,14:32:99:187,0,103	0/1:7,11:18:35.28:161,0,35	0/1:26,13:39:99:241,0,172	0/1:20,10:30:99:109,0,148	0/1:6,3:9:27.41:47,0,27
chr10	43783926	.	TG	T	2137.27	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.294;DP=684;FS=3.088;HRun=2;HaplotypeScore=62.0636;InbreedingCoeff=0.9998;MQ=82.69;MQ0=0;MQRankSum=-0.772;QD=33.39;ReadPosRankSum=2.452;VQSLOD=3.8673;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,132,1874	0/0:11,0:11:33.10:0,33,475	0/0:29,0:29:69.16:0,69,982	0/0:27,0:27:81.10:0,81,1145	0/0:23,0:23:69.23:0,69,1030	0/0:24,0:24:72.22:0,72,1056	0/0:25,0:25:72.24:0,72,1077	0/0:25,0:25:75.25:0,75,1106	0/0:23,0:23:69.23:0,69,1034	0/0:29,0:28:81.19:0,81,1152	0/0:19,0:19:54.18:0,54,807	0/0:21,0:21:57.19:0,57,852	0/0:22,0:22:66.21:0,66,967	0/0:25,0:25:75.23:0,75,1084	1/1:0,38:38:99:1285,99,0	1/1:0,26:26:75.24:974,75,0	0/0:26,0:26:78.25:0,78,1148	0/0:15,0:15:45.14:0,45,654	0/0:12,0:12:36.11:0,36,520	0/0:27,0:27:81.27:0,81,1209	0/0:17,0:17:51.17:0,51,764	0/0:23,0:23:69.23:0,69,1033	0/0:24,0:24:69.23:0,69,1034	0/0:25,0:25:75.25:0,75,1124	0/0:23,0:22:69.23:0,69,1034	0/0:24,0:24:72.24:0,72,1079	0/0:34,0:34:98.98:0,99,1408	0/0:23,0:23:69.21:0,69,994
chr10	43784557	.	GACAGAC	G	2974.83	PASS	AB=0.972;AC=18;AF=0.321;AN=56;BaseQRankSum=13.651;DP=726;FS=18.706;HRun=0;HaplotypeScore=188.6909;InbreedingCoeff=-0.3246;MQ=51.04;MQ0=19;MQRankSum=-10.964;QD=7.19;ReadPosRankSum=8.216;VQSLOD=0.7210;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:44:99:0,113,2196	0/1:4,10:14:41.70:163,0,42	0/0:19,0:7:7.93:0,8,85	0/0:21,0:11:21.38:0,21,167	0/0:24,0:24:61.49:0,61,1153	0/0:32,0:32:84.17:0,84,1542	0/0:30,0:29:37.23:0,37,1046	0/1:38,0:37:99:157,0,220	0/0:28,0:28:81.18:0,81,1459	0/1:30,0:30:99:467,0,141	0/1:19,0:18:53.52:54,0,80	0/1:26,0:26:99:156,0,109	0/1:37,0:37:50.98:273,0,51	0/1:25,0:25:56.97:218,0,57	0/0:27,0:27:75.27:0,75,1113	0/0:32,0:32:90.29:0,90,1522	1/1:2,26:28:14.96:315,15,0	0/1:21,0:20:63.51:145,0,64	0/1:19,0:17:49.05:240,0,49	0/1:18,0:17:35.26:35,0,62	0/0:38,0:38:26.64:0,27,210	0/1:27,0:25:65.64:66,0,204	0/0:16,0:16:8.91:0,9,64	0/1:39,0:37:27.42:27,0,89	0/1:17,0:15:28.04:206,0,28	0/1:25,0:22:82.43:410,0,82	0/1:23,0:22:99:183,0,134	0/1:7,0:7:24.83:25,0,40
chr10	43784561	.	GACACACACAC	G	5882.58	PASS	AB=0.590;AC=24;AF=0.429;AN=56;BaseQRankSum=8.258;DP=715;FS=15.365;HRun=0;HaplotypeScore=220.0110;InbreedingCoeff=0.3595;MQ=51.02;MQ0=18;MQRankSum=-7.402;QD=15.60;ReadPosRankSum=1.200;VQSLOD=2.7855;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:40:99:0,99,3394	0/0:13,0:13:14.98:0,15,242	0/0:16,0:6:1.82:0,2,5	0/0:22,0:11:6.02:0,6,202	0/0:23,0:25:59.20:0,59,1896	0/0:36,0:36:75.24:0,75,2404	0/0:24,0:29:54.09:0,54,1690	1/1:15,24:38:72.01:1174,72,0	0/0:30,0:30:75.24:0,75,2298	0/1:8,0:29:54.28:361,0,54	0/1:6,0:19:18.98:72,0,19	1/1:7,19:26:24.08:734,24,0	1/1:8,27:34:38.85:1107,39,0	1/1:5,19:24:30.10:912,30,0	0/0:26,0:26:18.81:0,19,1122	0/0:32,0:32:29.63:0,30,1729	0/0:29,0:29:17.69:0,18,137	0/1:6,0:18:62.81:99,0,63	1/1:7,0:18:26.10:368,26,0	0/1:4,0:15:4.28:4,0,25	0/0:14,0:37:2.74:0,3,20	1/1:14,12:24:15.05:418,15,0	1/1:4,12:16:2.97:20,3,0	0/1:12,27:38:7.29:204,0,7	0/1:5,0:15:15.45:33,0,15	0/1:10,0:21:90.72:229,0,91	1/1:9,0:19:14.34:81,14,0	0/1:2,0:7:17.57:67,0,18
chr10	43785472	.	C	CCAGGGCGTG	7016.72	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-3.624;DP=783;FS=1.101;HRun=0;HaplotypeScore=210.4629;InbreedingCoeff=0.9951;MQ=78.66;MQ0=0;MQRankSum=-11.286;QD=106.31;ReadPosRankSum=-0.085;VQSLOD=4.6784;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:64,0:64:99:0,184,5367	0/0:16,0:16:39.13:0,39,1117	0/0:21,0:21:51.12:0,51,1091	0/0:16,0:16:25.79:0,26,947	0/0:20,0:20:48.16:0,48,1421	0/0:18,0:18:51.18:0,51,1492	0/0:24,0:24:69.24:0,69,2036	0/0:22,0:22:51.17:0,51,1397	0/0:34,0:34:96.32:0,96,2686	0/0:26,0:26:69.24:0,69,2052	0/0:18,0:18:42.14:0,42,1235	0/0:27,0:27:69.24:0,69,2035	0/0:27,0:27:75.25:0,75,2131	0/0:24,0:24:66.23:0,66,1926	1/1:17,19:39:84.29:3643,84,0	1/1:9,16:27:72.25:3373,72,0	0/0:24,0:24:69.22:0,69,1960	0/0:38,0:38:99:0,114,3292	0/0:25,0:25:63.21:0,63,1755	0/0:22,0:22:60.21:0,60,1670	0/0:70,0:70:99:0,199,5657	0/0:30,0:30:87.30:0,87,2444	0/0:26,0:26:72.20:0,72,1999	0/0:40,0:40:99:0,117,3432	0/0:24,0:24:69.24:0,69,2058	0/0:31,0:31:93.30:0,93,2551	0/0:23,0:23:66.19:0,66,1816	0/0:7,0:7:18.06:0,18,541
chr10	43786334	.	GGGCCCACAGCAT	G	1731.44	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.288;DP=711;FS=0.922;HRun=0;HaplotypeScore=239.7016;InbreedingCoeff=0.9955;MQ=84.73;MQ0=0;MQRankSum=-6.134;QD=69.26;ReadPosRankSum=2.351;VQSLOD=3.3163;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,163,9543	1/1:0,7:7:18.06:694,18,0	0/0:24,0:24:53.19:0,53,2382	0/0:21,0:21:56.96:0,57,1855	0/0:21,0:21:60.21:0,60,3571	0/0:19,0:19:57.18:0,57,3287	0/0:36,0:36:99:0,108,6196	0/0:24,0:24:72.23:0,72,3835	0/0:20,0:20:60.21:0,60,3604	0/0:35,0:35:99:0,105,6187	0/0:20,0:20:57.20:0,57,3420	0/0:29,0:29:87.26:0,87,4546	0/0:28,0:28:84.29:0,84,4939	0/0:24,0:24:72.25:0,72,4385	0/0:21,0:21:57.17:0,57,3096	0/0:17,0:17:44.97:0,45,2645	1/1:0,18:18:30.10:1157,30,0	0/0:24,0:23:69.19:0,69,3810	0/0:25,0:25:75.23:0,75,4013	0/0:26,0:26:78.27:0,78,4597	0/0:39,0:39:99:0,117,7021	0/0:31,0:31:90.30:0,90,5337	0/0:19,0:19:57.18:0,57,3403	0/0:33,0:33:93.31:0,93,5539	0/0:19,0:19:45.13:0,45,2421	0/0:29,0:29:87.29:0,87,5080	0/0:35,0:35:99:0,105,5847	0/0:13,0:13:39.12:0,39,1990
chr10	43786389	.	C	CT	912.79	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.817;DP=734;FS=7.105;HRun=7;HaplotypeScore=90.7041;InbreedingCoeff=0.9173;MQ=79.38;MQ0=0;MQRankSum=-0.331;QD=24.02;ReadPosRankSum=2.693;VQSLOD=3.9105;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,141,1344	0/0:10,0:10:20.98:0,21,192	0/0:25,0:25:59.04:0,59,534	0/0:25,0:25:42.47:0,42,481	0/0:26,0:26:72.01:0,72,674	0/0:20,0:20:54.08:0,54,521	0/0:27,0:27:72.02:0,72,672	0/0:31,0:31:69.06:0,69,652	0/0:21,0:21:60.10:0,60,579	0/0:39,0:39:96.10:0,96,917	0/0:23,0:23:60.09:0,60,579	0/0:33,0:33:87.10:0,87,828	0/0:31,0:31:90.13:0,90,863	0/0:23,0:23:63.09:0,63,604	1/1:2,23:25:57.65:689,58,0	1/1:1,12:13:4.13:333,4,0	0/0:22,0:22:54.06:0,54,515	0/0:22,0:22:60:0,60,550	0/0:24,0:24:61.30:0,61,564	0/0:23,0:23:48.04:0,48,452	0/0:44,0:44:99:0,117,1119	0/0:19,0:19:45.05:0,45,427	0/0:19,0:19:42.04:0,42,399	0/0:33,0:33:90.12:0,90,863	0/0:28,0:28:78.11:0,78,747	0/0:29,0:29:78.11:0,78,749	0/0:33,0:32:81.11:0,81,776	0/0:12,0:12:30:0,30,280
chr10	43787287	.	CA	C	285.50	PASS	AB=0.931;AC=9;AF=0.161;AN=56;BaseQRankSum=4.464;DP=461;FS=6.672;HRun=12;HaplotypeScore=80.5495;InbreedingCoeff=0.3645;MQ=60.61;MQ0=13;MQRankSum=-3.862;QD=2.50;ReadPosRankSum=0.918;VQSLOD=-0.4247;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:65.86:0,66,621	0/1:7,1:9:8.27:8,0,99	0/1:43,0:11:0.66:1,0,78	0/0:58,0:17:17.70:0,18,146	0/0:8,0:11:20.51:0,21,143	0/0:9,0:10:26.08:0,26,224	0/0:8,0:8:13.27:0,13,125	0/0:25,1:30:13.19:0,13,422	0/1:8,0:8:2.17:2,0,154	0/0:14,0:16:23.85:0,24,219	0/0:20,0:20:35.50:0,36,498	0/0:9,0:10:7.71:0,8,70	0/0:7,0:8:1.96:0,2,23	0/0:6,0:8:15.90:0,16,106	1/1:6,9:15:35.82:273,36,0	1/1:4,4:9:16.98:122,17,0	0/0:22,2:25:13.36:0,13,470	0/1:18,2:19:1.42:1,0,339	0/0:17,0:19:22.80:0,23,332	0/0:19,2:19:9.24:0,9,307	0/0:3,0:3:6.01:0,6,60	0/0:3,0:3:1.25:0,1,3	0/0:10,0:13:11.99:0,12,63	0/0:4,0:6:9.99:0,10,51	0/0:21,0:21:57.09:0,57,563	0/0:12,1:15:15.49:0,15,300	0/0:12,0:12:15.03:0,15,151	0/1:7,1:8:5.24:5,0,119
chr10	43787313	.	AAAATTT	A	1182.57	PASS	AB=1.000;AC=6;AF=0.107;AN=56;BaseQRankSum=5.555;DP=537;FS=0.000;HRun=0;HaplotypeScore=120.0348;InbreedingCoeff=0.6107;MQ=62.42;MQ0=33;MQRankSum=-6.859;QD=21.90;ReadPosRankSum=0.922;VQSLOD=3.1363;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:69.24:0,69,2219	0/1:8,0:8:5.63:6,0,61	0/0:90,0:16:46.15:0,46,752	0/0:103,0:26:58.70:0,59,834	0/0:11,0:11:30.10:0,30,987	0/0:12,0:12:36.12:0,36,1254	0/0:9,0:9:24.08:0,24,803	0/0:32,0:31:90.31:0,90,2520	0/0:11,0:11:33.11:0,33,1014	0/0:15,0:14:36.12:0,36,1061	0/0:16,0:16:48.16:0,48,1458	0/0:11,0:10:24.08:0,24,678	0/0:9,0:9:21.07:0,21,544	0/0:5,0:5:15.05:0,15,466	1/1:3,10:12:33.11:697,33,0	1/1:2,7:9:27.09:548,27,0	0/1:24,0:24:64.46:64,0,322	0/0:22,0:20:54.19:0,54,1672	0/0:20,0:19:57.20:0,57,1571	0/0:17,0:15:41.16:0,41,1096	0/0:3,0:3:9.03:0,9,309	0/0:3,0:3:9.03:0,9,177	0/0:10,0:10:27.09:0,27,607	0/0:7,0:7:18.06:0,18,391	0/0:20,0:19:60.21:0,60,1752	0/0:20,0:20:60.21:0,60,1694	0/0:7,0:6:18.06:0,18,497	0/0:6,0:5:15.05:0,15,451
chr10	43791345	.	TACAC	T	3588.24	PASS	AB=0.706;AC=23;AF=0.411;AN=56;BaseQRankSum=4.188;DP=564;FS=1.152;HRun=0;HaplotypeScore=108.7771;InbreedingCoeff=0.5622;MQ=60.70;MQ0=10;MQRankSum=-2.239;QD=13.64;ReadPosRankSum=1.453;VQSLOD=2.9818;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:37:32.85:0,33,576	0/0:6,0:6:9.03:0,9,132	0/0:26,0:17:3.01:0,3,32	0/0:20,0:13:3.01:0,3,42	0/0:16,0:16:18.04:0,18,299	0/0:19,0:23:29.57:0,30,480	0/0:20,0:21:33.58:0,34,681	0/0:29,0:29:9.01:0,9,132	0/0:11,0:11:15.05:0,15,313	0/1:12,3:16:0.26:130,0,0	1/1:9,5:17:20.92:228,21,0	0/1:8,1:19:24.89:25,0,64	0/1:6,1:10:25.19:36,0,25	0/0:8,0:15:8.23:0,8,37	1/1:21,0:21:42.10:629,42,0	1/1:18,0:18:26.96:369,27,0	0/0:19,0:20:38.87:0,39,788	0/1:9,9:17:25.95:173,0,26	1/1:12,0:12:2.25:46,2,0	1/1:12,9:22:22.73:283,23,0	0/1:17,10:27:25.70:154,0,26	0/0:18,0:25:19.95:0,20,116	0/0:10,0:17:22.37:0,22,119	0/0:16,1:34:35.95:0,36,194	1/1:7,11:18:18.05:264,18,0	1/1:9,10:19:23.92:350,24,0	1/1:13,13:27:42.13:621,42,0	1/1:9,8:17:17.38:281,17,0
chr10	43791366	.	ACAC	A	503.17	PASS	AB=0.959;AC=9;AF=0.161;AN=56;BaseQRankSum=13.826;DP=625;FS=2.616;HRun=0;HaplotypeScore=116.7052;InbreedingCoeff=0.0905;MQ=52.81;MQ0=11;MQRankSum=-1.049;QD=2.93;ReadPosRankSum=10.693;VQSLOD=0.5978;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:85.08:0,85,1368	0/0:5,0:5:15.05:0,15,242	0/0:23,0:8:18.94:0,19,239	0/0:24,0:9:27.08:0,27,341	0/0:17,0:17:36.59:0,37,630	0/0:28,0:27:71.93:0,72,1095	0/0:23,0:23:48.38:0,48,1074	0/0:30,0:29:87.06:0,87,1151	0/0:14,0:14:33.11:0,33,589	0/0:19,0:19:27.27:0,27,508	0/1:16,0:16:2.66:3,0,268	0/0:24,0:24:47.92:0,48,517	0/0:14,0:14:32.95:0,33,436	0/0:14,0:14:23.67:0,24,234	1/1:11,13:24:10.64:380,11,0	0/1:12,7:20:50.03:157,0,50	0/0:22,0:22:59.94:0,60,1161	0/1:23,0:22:26.77:27,0,378	0/0:12,0:12:27.32:0,27,410	0/1:20,0:20:3.72:4,0,338	0/0:35,0:35:19.07:0,19,542	0/0:23,0:22:56.24:0,56,581	0/0:19,0:19:44.22:0,44,451	0/0:35,0:35:73.63:0,74,696	0/1:20,0:19:16.68:17,0,217	0/0:30,0:30:28.61:0,29,798	0/1:32,0:32:40.58:41,0,481	0/1:17,0:17:9.71:10,0,267
chr10	43791920	.	TTCTG	T	1584.99	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.925;DP=615;FS=1.475;HRun=0;HaplotypeScore=97.8479;InbreedingCoeff=0.9156;MQ=88.53;MQ0=0;MQRankSum=-3.283;QD=45.29;ReadPosRankSum=1.620;VQSLOD=4.3802;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,132,3339	0/0:9,0:9:24.08:0,24,623	0/0:29,0:29:71.71:0,72,1650	0/0:30,0:29:81.22:0,81,1826	0/0:23,0:23:66.18:0,66,1670	0/0:22,0:22:63.20:0,63,1535	0/0:23,0:23:66.17:0,66,1457	0/0:24,0:24:72.23:0,72,1652	0/0:15,0:15:45.14:0,45,1105	0/0:27,0:27:72.24:0,72,1806	0/0:17,0:17:45.15:0,45,1185	0/0:20,0:20:60.21:0,60,1491	0/0:23,0:23:69.21:0,69,1619	0/0:19,0:19:54.19:0,54,1396	1/1:0,19:19:57.20:1044,57,0	1/1:0,16:16:36.12:662,36,0	0/0:21,0:21:60.21:0,60,1550	0/0:20,0:20:51.17:0,51,1277	0/0:23,0:23:66.06:0,66,1638	0/0:24,0:24:66.21:0,66,1683	0/0:31,0:31:87.30:0,87,2209	0/0:18,0:18:54.18:0,54,1374	0/0:20,0:20:54.19:0,54,1388	0/0:36,0:36:99:0,105,2587	0/0:13,0:13:36.11:0,36,897	0/0:29,0:29:87.30:0,87,2238	0/0:17,0:17:51.18:0,51,1331	0/0:1,0:1:3.01:0,3,79
chr10	43792184	.	C	CTTTT	1504.43	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.278;DP=685;FS=4.938;HRun=9;HaplotypeScore=115.8992;InbreedingCoeff=0.9696;MQ=71.63;MQ0=0;MQRankSum=-3.143;QD=32.71;ReadPosRankSum=0.222;VQSLOD=1.8875;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,102,1492	0/0:12,0:12:27.04:0,27,395	0/0:19,0:20:34.19:0,34,442	0/0:8,0:8:8.97:0,9,132	0/0:37,0:37:87.21:0,87,1273	0/0:31,0:31:78.18:0,78,1103	0/0:24,0:26:73.42:0,73,978	0/0:32,0:32:76.39:0,76,1082	0/0:25,0:25:72.22:0,72,1053	0/0:27,0:27:75.22:0,75,1075	0/0:34,0:34:87.20:0,87,1253	0/0:17,0:17:48.12:0,48,664	0/0:20,0:21:49.35:0,49,704	0/0:17,0:17:48.07:0,48,658	1/1:5,13:19:36.12:796,36,0	1/1:12,14:27:36.12:830,36,0	0/0:33,0:33:84.22:0,84,1226	0/0:13,0:13:36.09:0,36,525	0/0:31,0:32:78.20:0,78,1118	0/0:27,0:27:75.24:0,75,1095	0/0:21,0:21:54.12:0,54,769	0/0:25,0:25:45.04:0,45,737	0/0:20,0:20:51.12:0,51,740	0/0:29,0:29:72.16:0,72,1048	0/0:19,0:19:51.16:0,51,745	0/0:36,0:36:79.52:0,80,1204	0/0:23,0:24:69.21:0,69,989	0/0:13,0:13:36.09:0,36,527
chr10	43792804	.	C	CA	746.51	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-6.605;DP=708;FS=2.195;HRun=9;HaplotypeScore=85.6420;InbreedingCoeff=0.9914;MQ=73.55;MQ0=0;MQRankSum=-0.353;QD=18.66;ReadPosRankSum=0.874;VQSLOD=3.9248;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,1:29:41.78:0,42,591	1/1:2,10:12:27.07:299,27,0	0/0:18,0:19:21.18:0,21,219	0/0:23,0:22:29.64:0,30,268	0/0:36,1:37:59.83:0,60,748	0/0:26,0:26:71.98:0,72,625	0/0:14,0:14:32.99:0,33,286	0/0:27,0:27:56.94:0,57,495	0/0:22,0:22:56.97:0,57,491	0/0:43,0:43:99:0,117,1016	0/0:21,1:22:26.80:0,27,460	0/0:32,0:32:80.95:0,81,700	0/0:16,0:16:41.99:0,42,364	0/0:23,1:24:29.81:0,30,488	0/0:24,0:25:62:0,62,523	0/0:25,0:25:59.97:0,60,517	1/1:7,21:28:29.85:569,30,0	0/0:21,0:21:38.43:0,38,404	0/0:19,1:20:17.80:0,18,382	0/0:42,0:42:99:0,114,989	0/0:27,0:27:71.98:0,72,625	0/0:22,0:22:62.97:0,63,543	0/0:31,0:31:86.97:0,87,754	0/0:18,0:18:43.22:0,43,367	0/0:24,0:24:68.94:0,69,587	0/0:32,0:32:86.01:0,86,735	0/0:35,0:35:86.53:0,87,743	0/0:12,0:12:35.99:0,36,312
chr10	43794295	.	CT	C	1237.25	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.989;DP=643;FS=4.153;HRun=2;HaplotypeScore=66.3654;InbreedingCoeff=0.9897;MQ=83.11;MQ0=0;MQRankSum=-2.328;QD=30.18;ReadPosRankSum=2.705;VQSLOD=3.3166;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,138,1956	0/0:7,0:7:21.07:0,21,314	0/0:28,0:27:78.18:0,78,1106	0/0:19,0:19:54.04:0,54,682	0/0:18,0:18:54.17:0,54,771	0/0:17,0:17:51.17:0,51,757	0/0:29,0:29:84.28:0,84,1258	0/0:23,0:23:69.20:0,69,960	0/0:22,0:22:66.22:0,66,988	0/0:32,0:32:90.27:0,90,1247	0/0:13,0:13:39.10:0,39,528	0/0:15,0:15:45.12:0,45,649	0/0:21,0:21:57.17:0,57,813	0/0:20,0:20:54.11:0,54,758	1/1:0,25:25:66.21:855,66,0	1/1:1,15:16:39.13:504,39,0	0/0:43,0:43:99:0,129,1871	0/0:24,0:24:66.20:0,66,964	0/0:15,0:15:42.13:0,42,593	0/0:17,0:17:48.15:0,48,681	0/0:41,0:41:99:0,123,1795	0/0:28,0:28:84.14:0,84,1147	0/0:16,0:16:45.02:0,45,648	0/0:34,0:34:96.31:0,96,1418	0/0:17,0:17:51.14:0,51,706	0/0:17,0:17:48.16:0,48,716	0/0:30,0:29:87.20:0,87,1230	0/0:6,0:6:15.05:0,15,224
chr10	43794488	.	AAAC	A	1362.24	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=3.760;DP=656;FS=5.977;HRun=0;HaplotypeScore=129.1093;InbreedingCoeff=0.9912;MQ=67.68;MQ0=2;MQRankSum=-4.466;QD=36.82;ReadPosRankSum=1.855;VQSLOD=4.7573;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:48.16:0,48,1019	1/1:1,5:6:15.05:256,15,0	0/0:30,0:25:73.78:0,74,1465	0/0:28,0:21:53.34:0,53,994	0/0:26,0:26:36.12:0,36,719	0/0:24,0:24:66.22:0,66,1474	0/0:20,0:20:60.19:0,60,1280	0/0:20,0:20:60.20:0,60,1254	0/0:39,0:39:99:0,114,2491	0/0:24,0:24:72.23:0,72,1568	0/0:26,0:26:60.17:0,60,1223	0/0:25,0:25:48.16:0,48,1074	0/0:21,0:21:39.13:0,39,833	0/0:13,0:13:36.12:0,36,802	0/0:27,0:27:48.16:0,48,1027	0/0:31,0:31:56.78:0,57,1248	1/1:3,28:31:72.51:1225,73,0	0/0:17,0:17:41.85:0,42,908	0/0:27,0:27:81.28:0,81,1773	0/0:25,0:25:66.51:0,67,1423	0/0:20,0:20:48.16:0,48,1056	0/0:22,0:22:49.05:0,49,1021	0/0:22,0:22:33.11:0,33,720	0/0:27,0:27:75.71:0,76,1571	0/0:17,0:17:47.53:0,48,1023	0/0:20,0:19:57.20:0,57,1253	0/0:27,0:26:78.27:0,78,1727	0/0:10,0:10:30.10:0,30,669
chr10	43794901	.	AAAAG	A	8144.48	PASS	AB=0.766;AC=22;AF=0.393;AN=56;BaseQRankSum=13.035;DP=613;FS=0.695;HRun=0;HaplotypeScore=105.4277;InbreedingCoeff=0.8639;MQ=69.12;MQ0=0;MQRankSum=0.018;QD=28.88;ReadPosRankSum=-0.737;VQSLOD=4.6778;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:57.14:0,57,1247	0/0:9,0:9:27.06:0,27,499	0/1:28,0:15:0.45:0,0,488	0/0:28,0:15:1.03:0,1,271	0/0:30,0:30:81.21:0,81,1656	0/0:20,0:20:57.20:0,57,1368	0/0:19,0:19:54.17:0,54,1048	1/1:3,31:34:93.10:1225,93,0	0/0:13,0:13:36.12:0,36,863	1/1:1,22:23:66.14:959,66,0	1/1:5,23:28:73.73:929,74,0	0/0:17,0:17:45.15:0,45,1068	0/0:21,0:21:57.16:0,57,1192	0/0:19,0:19:54.16:0,54,1128	0/0:14,0:11:14.91:0,15,209	0/0:13,0:11:23.97:0,24,283	0/0:25,0:25:72.20:0,72,1542	0/1:3,22:24:6.43:566,0,6	1/1:3,13:15:39.08:568,39,0	1/1:3,21:24:62.19:802,62,0	1/1:3,9:12:23.87:338,24,0	0/0:23,0:23:62.60:0,63,1202	0/0:23,0:23:69.14:0,69,1400	0/0:32,0:32:84.24:0,84,1786	1/1:6,22:28:39.13:632,39,0	1/1:2,18:20:54.17:839,54,0	1/1:2,19:21:45.11:724,45,0	1/1:6,17:23:44.86:563,45,0
chr10	43794909	.	GA	G	131.48	PASS	AB=0.667;AC=3;AF=0.054;AN=56;BaseQRankSum=4.941;DP=595;FS=9.700;HRun=5;HaplotypeScore=96.3894;InbreedingCoeff=0.3358;MQ=70.06;MQ0=0;MQRankSum=-2.959;QD=4.70;ReadPosRankSum=1.769;VQSLOD=-0.2467;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:66.20:0,66,877	0/0:8,0:8:24.08:0,24,328	0/0:22,0:13:14.69:0,15,459	0/0:25,0:15:22.89:0,23,316	0/0:30,0:30:81.27:0,81,1108	0/0:21,0:21:54.15:0,54,705	0/0:18,0:18:45.12:0,45,597	0/0:37,0:37:65.24:0,65,526	0/0:14,0:14:39.11:0,39,515	0/0:24,0:24:34.34:0,34,245	0/0:26,0:26:36.14:0,36,281	0/0:17,0:17:45.14:0,45,596	0/0:21,0:21:54.18:0,54,738	0/0:18,0:18:51.17:0,51,696	0/1:7,7:11:29.44:51,0,29	1/1:4,10:12:0.47:170,0,0	0/0:26,0:26:75.22:0,75,991	0/0:24,0:23:11.97:0,12,49	0/0:16,0:15:22.51:0,23,152	0/0:23,0:23:29.38:0,29,227	0/0:11,0:11:8.84:0,9,64	0/0:24,0:24:69.23:0,69,942	0/0:25,0:25:72.24:0,72,984	0/0:31,0:31:75.25:0,75,1024	0/0:24,0:24:13.59:0,14,70	0/0:19,0:19:24.36:0,24,121	0/0:21,0:21:13.68:0,14,63	0/0:19,0:19:17.71:0,18,119
chr10	43796623	.	A	AT	3162.89	PASS	AB=0.875;AC=17;AF=0.304;AN=56;BaseQRankSum=-5.124;DP=486;FS=3.694;HRun=9;HaplotypeScore=50.2625;InbreedingCoeff=0.8773;MQ=77.91;MQ0=0;MQRankSum=-0.913;QD=24.14;ReadPosRankSum=0.353;VQSLOD=4.4292;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:24:68.97:0,69,595	0/1:6,1:7:15.18:15,0,112	0/0:14,0:13:26.40:0,26,202	0/0:14,0:14:1.15:0,1,149	0/0:23,0:23:50.96:0,51,443	0/0:15,0:15:38.97:0,39,334	0/0:26,0:26:74.97:0,75,647	0/0:19,0:19:41.21:0,41,363	0/0:19,0:19:50.98:0,51,443	0/0:18,0:18:53.99:0,54,469	0/0:15,0:15:44.97:0,45,387	1/1:3,13:17:38.94:412,39,0	1/1:0,11:11:30.08:332,30,0	1/1:2,16:18:39.11:432,39,0	1/1:2,20:22:54.15:597,54,0	1/1:2,11:13:33.09:365,33,0	0/0:22,2:24:26.80:0,27,462	0/0:13,0:13:35.98:0,36,312	0/0:19,1:20:47.96:0,48,411	0/0:23,0:23:68.99:0,69,599	0/0:23,0:23:53.98:0,54,469	1/1:0,7:8:23.90:246,24,0	1/1:3,16:19:48.12:524,48,0	1/1:2,13:16:41.95:446,42,0	0/0:19,0:19:41.98:0,42,365	0/0:16,0:16:41.98:0,42,365	0/0:24,0:24:59.94:0,60,513	0/0:5,0:5:11.99:0,12,104
chr10	43796828	.	TA	T	1474.78	PASS	AB=1.000;AC=14;AF=0.250;AN=56;BaseQRankSum=7.608;DP=506;FS=3.400;HRun=12;HaplotypeScore=61.4713;InbreedingCoeff=0.7907;MQ=72.93;MQ0=1;MQRankSum=-0.027;QD=11.01;ReadPosRankSum=1.660;VQSLOD=3.3156;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:69.44:0,69,815	0/0:6,0:7:17.87:0,18,167	0/1:16,0:10:20.10:20,0,128	0/1:21,0:14:5.11:5,0,80	0/0:18,0:18:26.94:0,27,418	0/0:24,0:24:60:0,60,587	0/0:16,0:17:26.71:0,27,362	0/0:17,0:18:38.87:0,39,364	0/0:11,0:10:27.03:0,27,261	0/0:17,0:20:42.37:0,42,403	0/0:13,0:13:12.85:0,13,300	1/1:6,10:16:26.88:209,27,0	1/1:4,11:15:29.87:232,30,0	1/1:0,13:13:38.85:302,39,0	0/0:22,0:22:57.11:0,57,578	0/0:14,0:14:36.04:0,36,352	0/0:26,0:26:42.86:0,43,568	0/0:26,0:27:47.91:0,48,612	0/0:25,0:27:62.58:0,63,559	0/0:14,0:14:39.40:0,39,372	0/0:10,0:12:26.72:0,27,241	1/1:2,10:12:26.85:205,27,0	1/1:2,16:18:29.61:227,30,0	1/1:2,21:23:59.76:464,60,0	0/0:17,0:17:26.62:0,27,241	0/0:26,1:29:48.87:0,49,622	0/0:17,0:17:12.91:0,13,311	0/0:3,0:3:3.01:0,3,30
chr10	43797283	.	TAAG	T	1438.76	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.250;DP=727;FS=1.477;HRun=0;HaplotypeScore=123.4614;InbreedingCoeff=0.9998;MQ=92.47;MQ0=0;MQRankSum=-1.471;QD=38.89;ReadPosRankSum=1.148;VQSLOD=4.2908;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:78.18:0,78,1841	1/1:0,14:14:39.05:687,39,0	0/0:35,0:35:98.35:0,98,2204	0/0:28,0:28:74.40:0,74,1704	0/0:24,0:24:72.25:0,72,1742	0/0:34,0:34:99:0,102,2367	0/0:16,0:16:48.16:0,48,1176	0/0:29,0:29:87.27:0,87,1955	0/0:26,0:26:78.24:0,78,1803	0/0:37,0:37:99:0,111,2617	0/0:20,0:20:60.21:0,60,1461	0/0:30,0:30:90.31:0,90,2215	0/0:27,0:27:81.26:0,81,1921	0/0:32,0:32:96.29:0,96,2264	0/0:37,0:37:99:0,108,2554	0/0:31,0:31:93.25:0,93,2235	1/1:0,23:23:48.16:874,48,0	0/0:24,0:24:72.20:0,72,1641	0/0:27,0:27:78.27:0,78,1881	0/0:30,0:30:87.27:0,87,1979	0/0:20,0:20:60.21:0,60,1473	0/0:20,0:20:60.21:0,60,1470	0/0:23,0:23:69.20:0,69,1646	0/0:23,0:23:69.16:0,69,1547	0/0:20,0:20:54.14:0,54,1184	0/0:31,0:31:90.30:0,90,2123	0/0:29,0:29:87.28:0,87,2088	0/0:11,0:11:33.11:0,33,813
chr10	43797468	.	TGTGTGG	T	687.81	PASS	AC=4;AF=0.074;AN=54;BaseQRankSum=6.232;DP=811;FS=11.347;HRun=0;HaplotypeScore=193.7730;InbreedingCoeff=0.9559;MQ=47.27;MQ0=99;MQRankSum=-5.073;QD=15.28;ReadPosRankSum=-3.537;VQSLOD=1.5540;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:35:80.30:0,80,2235	0/0:9,0:7:20.41:0,20,363	0/0:33,0:3:8.06:0,8,195	./.	0/0:13,0:13:27.09:0,27,713	0/0:25,0:22:51.17:0,51,1471	0/0:36,0:35:86.76:0,87,2370	0/0:28,0:20:50.66:0,51,1213	0/0:21,0:16:38.86:0,39,1114	0/0:40,0:35:99:0,104,2468	0/0:18,0:16:36.12:0,36,1035	0/0:38,0:34:84.11:0,84,1952	0/0:25,0:22:45.15:0,45,1101	0/0:29,0:25:66.30:0,66,1267	1/1:17,10:25:29.66:351,30,0	1/1:12,4:14:38.84:458,39,0	0/0:40,0:37:82.62:0,83,2239	0/0:33,0:30:73.69:0,74,1845	0/0:29,0:24:63.15:0,63,1380	0/0:18,0:16:33.11:0,33,924	0/0:85,0:77:99:0,165,4594	0/0:26,0:23:45.10:0,45,898	0/0:20,0:18:28.32:0,28,718	0/0:41,0:37:81.25:0,81,2042	0/0:17,0:16:36:0,36,998	0/0:42,0:32:88.46:0,88,2409	0/0:16,0:10:23.75:0,24,617	0/0:13,0:7:18.03:0,18,405
chr10	43797475	.	GGTGT	G	2563.61	PASS	AB=0.941;AC=23;AF=0.442;AN=52;BaseQRankSum=-0.016;DP=779;FS=0.513;HRun=0;HaplotypeScore=161.1671;InbreedingCoeff=-0.0356;MQ=48.01;MQ0=91;MQRankSum=-0.804;QD=4.70;ReadPosRankSum=0.817;VQSLOD=2.5206;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:28,1:32:60.60:61,0,68	0/0:6,0:6:8.96:0,9,69	./.	./.	0/0:5,0:14:10.21:0,10,51	0/1:18,1:22:18.58:19,0,424	0/0:30,0:37:32.76:0,33,692	0/0:24,0:16:6.02:0,6,87	0/0:22,0:17:26.62:0,27,419	0/1:40,0:35:99:124,0,390	0/1:17,0:15:27.12:27,0,84	1/1:17,21:36:39.64:575,40,0	1/1:14,9:22:15.41:220,15,0	1/1:11,13:25:41.13:570,41,0	0/0:27,0:24:13.26:0,13,94	0/1:14,0:12:21.95:22,0,77	0/0:33,0:36:42.47:0,42,587	0/1:34,0:31:2.45:2,0,257	0/1:29,0:22:18.30:18,0,167	0/1:17,0:15:33.31:33,0,108	0/1:86,0:78:57.53:58,0,384	0/1:13,13:25:20.62:308,0,21	1/1:12,5:15:5.75:95,6,0	1/1:24,13:34:30.06:441,30,0	0/0:18,0:16:24.05:0,24,290	0/1:45,0:34:99:117,0,226	0/1:15,0:9:19.13:19,0,84	0/1:11,0:5:21.65:26,0,22
chr10	43797477	.	T	TGTG	562.14	PASS	AB=0.956;AC=6;AF=0.111;AN=54;BaseQRankSum=6.069;DP=749;FS=4.657;HRun=0;HaplotypeScore=163.8501;InbreedingCoeff=0.2367;MQ=48.12;MQ0=86;MQRankSum=-2.982;QD=5.57;ReadPosRankSum=-1.318;VQSLOD=2.7225;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:34:62.87:0,63,717	0/1:7,0:6:9.91:10,0,102	0/0:22,0:4:9.03:0,9,114	./.	0/0:14,0:14:6.32:0,6,253	0/0:26,0:23:51.11:0,51,641	0/0:37,0:36:44.89:0,45,906	0/0:25,0:17:39.58:0,40,462	0/0:21,0:16:28.73:0,29,456	0/0:38,0:33:57.90:0,58,1037	0/0:17,0:15:30.03:0,30,400	0/0:37,0:34:66.07:0,66,697	0/0:22,0:19:18.22:0,18,350	0/0:26,0:23:49.33:0,49,483	1/1:21,6:24:12.66:313,13,0	0/1:11,3:13:28.66:332,0,29	0/1:39,0:36:22.17:22,0,691	0/0:34,0:31:50.85:0,51,792	0/0:29,0:22:45.35:0,45,514	0/0:15,0:14:26.90:0,27,344	0/0:83,0:75:99:0,124,1685	0/0:28,0:25:38.69:0,39,407	0/1:14,0:13:3.31:3,0,92	0/0:36,0:32:56.49:0,56,618	0/0:18,0:16:30.10:0,30,425	0/0:38,0:28:60.66:0,61,788	0/0:14,0:9:18.06:0,18,232	0/0:10,0:5:12.04:0,12,158
chr10	43797507	.	TGTGC	T	3081.74	PASS	AB=0.956;AC=26;AF=0.464;AN=56;BaseQRankSum=4.465;DP=592;FS=1.316;HRun=0;HaplotypeScore=140.1941;InbreedingCoeff=-0.0950;MQ=59.04;MQ0=19;MQRankSum=-1.999;QD=7.35;ReadPosRankSum=1.749;VQSLOD=2.7099;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:26:7.39:0,7,334	1/1:8,0:8:3.13:56,3,0	0/0:19,0:7:14.67:0,15,215	0/0:16,0:8:9.01:0,9,96	0/0:13,0:13:23.47:0,23,159	0/0:22,0:21:24.04:0,24,689	0/0:36,0:36:80.65:0,81,1169	0/1:13,0:11:33.09:139,0,33	0/0:20,0:18:41.51:0,42,584	0/1:11,14:24:86.94:390,0,87	0/1:6,1:7:18.02:50,0,18	0/1:28,0:28:65.94:257,0,66	0/1:16,0:16:44.33:112,0,44	1/1:20,0:19:22.72:291,23,0	1/1:23,0:22:27.09:258,27,0	1/1:21,0:21:19.08:277,19,0	0/1:25,0:25:31.07:31,0,255	0/1:30,0:30:11.43:55,0,11	0/1:17,1:16:8.11:252,0,8	0/1:17,1:17:23.22:81,0,23	0/1:59,2:60:82.83:171,0,83	0/1:25,0:25:99:157,0,145	0/1:12,0:12:53.22:53,0,99	0/1:32,0:30:99:181,0,209	0/0:19,0:18:15.33:0,15,92	1/1:9,13:22:3.52:396,4,0	0/1:11,0:10:19.69:32,0,20	1/1:4,0:4:0.86:18,1,0
chr10	43797509	.	TGC	T	4266.37	PASS	AB=0.979;AC=30;AF=0.536;AN=56;BaseQRankSum=0.867;DP=585;FS=22.614;HRun=0;HaplotypeScore=121.3785;InbreedingCoeff=0.7559;MQ=60.63;MQ0=18;MQRankSum=0.887;QD=13.85;ReadPosRankSum=2.216;VQSLOD=3.0006;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:28:12.19:0,12,332	1/1:7,1:8:6.55:99,7,0	0/0:19,0:7:8.05:0,8,124	0/0:17,0:9:12:0,12,118	0/1:14,0:14:28.88:29,0,64	0/0:21,0:21:10.73:0,11,397	0/0:35,0:35:73.03:0,73,799	1/1:15,0:13:24.50:222,24,0	0/0:19,0:17:25.13:0,25,376	1/1:22,3:24:43.52:562,44,0	1/1:3,4:7:9.01:109,9,0	0/0:30,0:30:50.49:0,50,260	0/0:18,0:18:22.09:0,22,148	0/0:19,0:19:12.80:0,13,58	1/1:21,0:24:43.27:335,43,0	1/1:16,0:19:39.66:309,40,0	0/1:22,1:23:11.55:109,0,12	1/1:7,22:29:41.17:497,41,0	1/1:5,13:16:41.03:425,41,0	1/1:3,14:17:14.85:170,15,0	1/1:13,41:53:35.84:453,36,0	0/0:26,0:26:33.36:0,33,238	0/0:12,0:12:4.10:0,4,108	0/0:30,0:29:54.13:0,54,339	1/1:3,15:17:18.06:250,18,0	1/1:16,4:20:56.95:550,57,0	1/1:3,9:11:8.88:108,9,0	1/1:1,3:4:2.90:42,3,0
chr10	43798732	.	ATCAGTGGTCTTTC	A	4192.62	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.676;DP=680;FS=5.162;HRun=0;HaplotypeScore=241.7371;InbreedingCoeff=0.9991;MQ=75.07;MQ0=0;MQRankSum=-9.985;QD=99.82;ReadPosRankSum=2.820;VQSLOD=3.3109;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:96.29:0,96,5351	0/0:9,0:9:27.09:0,27,1769	0/0:23,0:23:57.13:0,57,2863	0/0:20,0:20:57.20:0,57,2578	0/0:32,0:32:96.33:0,96,6030	0/0:32,0:32:93.30:0,93,5356	0/0:29,0:29:84.25:0,84,4991	0/0:38,0:38:99:0,102,5708	0/0:25,0:25:75.26:0,75,4827	0/0:34,0:34:96.33:0,96,6053	0/0:19,0:19:47.52:0,48,3172	0/0:27,0:27:81.26:0,81,4986	0/0:22,0:22:66.23:0,66,4156	0/0:13,0:13:39.13:0,39,2574	1/1:0,23:23:63.22:2516,63,0	1/1:1,18:19:42.14:1677,42,0	0/0:25,0:25:72.25:0,72,4315	0/0:25,0:25:75.26:0,75,4677	0/0:17,0:17:46.04:0,46,2661	0/0:36,0:36:99:0,105,6564	0/0:26,0:26:75.24:0,75,4354	0/0:11,0:11:30.10:0,30,1875	0/0:26,0:26:78.27:0,78,4625	0/0:23,0:23:66.18:0,66,4072	0/0:16,0:16:42.14:0,42,2768	0/0:31,0:31:84.29:0,84,5239	0/0:30,0:30:87.30:0,87,5185	0/0:15,0:15:45.15:0,45,2497
chr10	43800046	.	A	AAAAAAAAAGAAAAGAAAAG	6217.21	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.907;DP=566;FS=16.154;HRun=0;HaplotypeScore=275.8321;InbreedingCoeff=0.8905;MQ=59.63;MQ0=4;MQRankSum=-8.696;QD=144.59;ReadPosRankSum=-0.998;VQSLOD=3.4175;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:84.28:0,84,3844	0/0:5,0:5:12.01:0,12,421	0/0:9,0:6:18.03:0,18,514	0/0:8,0:7:4.65:0,5,307	0/0:23,0:23:63.19:0,63,2784	0/0:11,0:11:24.08:0,24,1180	0/0:19,0:19:51.15:0,51,2253	0/0:34,0:33:37.29:0,37,2395	0/0:20,0:20:51.11:0,51,2261	0/0:20,0:20:42.13:0,42,1774	0/0:19,0:18:42.13:0,42,1658	0/0:19,0:19:42.13:0,42,1840	0/0:15,0:15:36.12:0,36,1560	0/0:22,0:22:54.17:0,54,2366	1/1:17,2:20:39.13:3263,39,0	1/1:19,2:22:48.16:2954,48,0	0/0:29,0:29:78.27:0,78,3690	0/0:30,0:30:66.17:0,66,2969	0/0:17,0:16:39.07:0,39,1214	0/0:31,0:31:72.15:0,72,2997	0/0:30,0:30:78.27:0,78,3484	0/0:10,0:10:27.09:0,27,1328	0/0:24,0:24:57.18:0,57,2592	0/0:16,0:16:42.14:0,42,1890	0/0:14,0:14:32.01:0,32,1525	0/0:24,0:24:66.20:0,66,2755	0/0:33,0:33:84.18:0,84,3559	0/0:4,0:4:9.03:0,9,117
chr10	43802014	.	CTTTTT	C	968.60	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=4.979;DP=336;FS=1.854;HRun=13;HaplotypeScore=64.5525;InbreedingCoeff=0.5934;MQ=69.91;MQ0=3;MQRankSum=-0.576;QD=17.30;ReadPosRankSum=4.255;VQSLOD=-0.1612;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:22:48.15:0,48,1172	1/1:2,1:3:2.98:40,3,0	0/0:12,0:9:9.03:0,9,162	0/0:6,0:4:2.73:0,3,76	0/0:9,0:11:30.10:0,30,703	0/0:22,0:22:57.20:0,57,1542	0/0:3,0:4:9.03:0,9,222	0/0:39,0:38:87.29:0,87,2292	0/0:8,0:8:21.07:0,21,580	0/0:6,0:7:21.07:0,21,587	0/0:6,0:6:9:0,9,195	0/0:5,0:12:27.07:0,27,474	0/0:1,0:5:9.03:0,9,154	0/0:1,0:3:3.01:0,3,52	1/1:10,0:10:2.78:15,3,0	1/1:16,0:15:2.72:15,3,0	1/1:4,23:27:59.40:1025,59,0	0/0:24,0:26:63.22:0,63,1794	0/0:13,0:14:33.11:0,33,887	0/0:5,0:5:9.03:0,9,260	0/0:9,0:9:21.07:0,21,527	0/0:2,0:5:9.03:0,9,137	0/0:1,0:2:3.01:0,3,52	0/0:1,0:2:3.01:0,3,52	0/0:15,0:15:36.12:0,36,960	0/0:12,0:11:30.09:0,30,725	0/0:15,0:15:36.12:0,36,996	0/0:14,0:16:48.16:0,48,1239
chr10	43803154	.	C	CT	2174.14	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.776;DP=542;FS=2.891;HRun=0;HaplotypeScore=62.6177;InbreedingCoeff=0.9656;MQ=93.45;MQ0=0;MQRankSum=-3.301;QD=43.48;ReadPosRankSum=2.874;VQSLOD=4.2884;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:96.27:0,96,1287	0/0:7,0:7:21.07:0,21,282	0/0:29,0:29:85.97:0,86,1091	0/0:24,0:24:34.84:0,35,866	0/0:15,0:15:45.12:0,45,595	0/0:25,0:25:72.23:0,72,988	0/0:40,0:40:99:0,120,1598	0/0:17,0:17:48.15:0,48,656	0/0:15,0:15:45.15:0,45,628	0/0:20,0:20:60.20:0,60,834	0/0:9,0:9:24.08:0,24,334	0/0:18,0:18:54.17:0,54,731	0/0:23,0:23:69.23:0,69,965	0/0:14,0:14:42.14:0,42,587	1/1:1,21:22:60.20:957,60,0	1/1:0,28:28:84.29:1339,84,0	0/0:24,0:24:66.19:0,66,901	0/0:15,0:15:42.11:0,42,565	0/0:18,0:18:54.18:0,54,755	0/0:14,0:14:42.14:0,42,584	0/0:29,0:29:84.27:0,84,1159	0/0:14,0:14:42.12:0,42,566	0/0:7,0:7:21.07:0,21,291	0/0:37,0:36:99:0,108,1510	0/0:14,0:14:42.14:0,42,586	0/0:17,0:17:51.15:0,51,679	0/0:12,0:12:36.12:0,36,502	0/0:3,0:3:9.03:0,9,124
chr10	43803216	.	T	TCACCACCACCACCAC	8677.12	PASS	AC=34;AF=0.708;AN=48;BaseQRankSum=7.355;DP=404;FS=18.330;HRun=0;HaplotypeScore=189.2767;InbreedingCoeff=0.7656;MQ=66.99;MQ0=3;MQRankSum=-7.457;QD=36.61;ReadPosRankSum=-0.165;VQSLOD=3.1690;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:33.11:0,33,1161	1/1:2,0:2:2.98:21,3,0	0/0:23,0:17:8.20:0,8,250	0/0:25,0:21:15.02:0,15,390	0/0:8,0:8:12.04:0,12,424	0/0:20,0:20:22.96:0,23,997	0/0:37,0:38:60.20:0,60,2242	1/1:15,0:15:12.02:153,12,0	0/0:20,0:20:51.15:0,51,1774	1/1:13,0:13:10.28:616,10,0	./.	1/1:16,0:16:29:933,29,0	1/1:18,0:18:11.97:578,12,0	1/1:17,0:17:27.06:1177,27,0	1/1:21,3:23:50.93:2456,51,0	1/1:25,2:27:39.19:1081,39,0	1/1:17,0:17:20.97:618,21,0	1/1:8,0:8:5.99:193,6,0	1/1:8,0:8:3.01:111,3,0	./.	1/1:16,0:16:12.49:135,12,0	1/1:4,0:4:3.01:109,3,0	./.	1/1:21,0:21:9.03:135,9,0	1/1:10,0:10:3:26,3,0	1/1:8,0:8:14.96:296,15,0	1/1:13,0:13:3.01:41,3,0	./.
chr10	43803250	.	C	CATCTCA	2307.32	PASS	AB=0.944;AC=6;AF=0.111;AN=54;BaseQRankSum=7.262;DP=371;FS=3.622;HRun=0;HaplotypeScore=95.9016;InbreedingCoeff=0.5197;MQ=77.09;MQ0=11;MQRankSum=-7.972;QD=37.21;ReadPosRankSum=2.389;VQSLOD=3.3514;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:78.25:0,78,1719	0/0:1,0:2:3.01:0,3,61	0/0:30,0:23:66.21:0,66,1278	0/0:18,0:18:48.02:0,48,738	0/0:19,0:19:54.18:0,54,1177	0/0:18,0:17:51.17:0,51,1183	0/0:32,0:32:96.33:0,96,2111	0/0:11,0:10:27.09:0,27,510	0/0:22,0:22:66.23:0,66,1610	0/0:11,0:9:29.96:0,30,498	./.	0/0:13,0:13:39.13:0,39,853	0/0:10,0:10:24.08:0,24,525	0/0:14,0:14:33.11:0,33,668	1/1:1,11:21:45.05:1280,45,0	1/1:3,6:17:21.60:1134,22,0	0/1:16,0:16:14.70:15,0,680	0/0:7,0:7:21.04:0,21,428	0/0:15,0:13:37.76:0,38,675	0/0:8,0:8:15.05:0,15,293	0/0:12,0:11:27.09:0,27,555	0/0:9,0:9:26.76:0,27,494	0/0:8,0:8:24.07:0,24,508	0/1:7,0:8:10.63:11,0,106	0/0:3,0:3:6.02:0,6,115	0/0:10,0:10:24.08:0,24,456	0/0:6,0:6:12.04:0,12,199	0/0:1,0:1:3.01:0,3,70
chr10	43803265	.	C	CT	1226.06	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.047;DP=424;FS=5.354;HRun=7;HaplotypeScore=72.0699;InbreedingCoeff=0.8609;MQ=85.88;MQ0=0;MQRankSum=-5.949;QD=26.09;ReadPosRankSum=-0.861;VQSLOD=4.0358;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:72.10:0,72,695	0/0:2,0:2:6.01:0,6,58	0/0:23,0:23:60.03:0,60,562	0/0:24,0:24:59.60:0,60,532	0/0:21,0:21:57.08:0,57,550	0/0:18,0:18:48.07:0,48,462	0/0:30,0:30:78.11:0,78,748	0/0:13,0:13:36.06:0,36,347	0/0:26,0:26:72.11:0,72,695	0/0:13,0:12:33.05:0,33,319	0/0:3,0:3:9.01:0,9,85	0/0:21,0:21:60.09:0,60,579	0/0:12,0:12:30.04:0,30,289	0/0:18,0:18:48.07:0,48,463	1/1:7,21:27:66.15:768,66,0	1/1:3,16:19:48.15:579,48,0	0/0:15,0:15:33.04:0,33,317	0/0:10,0:10:24.03:0,24,231	0/0:14,0:14:36.05:0,36,344	0/0:8,0:8:21.03:0,21,203	0/0:18,0:18:45.03:0,45,425	0/0:13,0:13:36.05:0,36,342	0/0:10,0:10:30.05:0,30,290	0/0:10,0:10:17.98:0,18,172	0/0:7,0:7:15.02:0,15,145	0/0:11,0:11:24.04:0,24,231	0/0:8,0:8:21.03:0,21,203	0/0:2,0:2:6.01:0,6,58
chr10	43803678	.	CA	C	1487.80	PASS	AB=0.807;AC=22;AF=0.393;AN=56;BaseQRankSum=-1.059;DP=567;FS=15.930;HRun=15;HaplotypeScore=97.0002;InbreedingCoeff=0.2158;MQ=63.52;MQ0=13;MQRankSum=0.027;QD=4.77;ReadPosRankSum=1.164;VQSLOD=0.7362;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:30:65.83:0,66,523	0/1:10,1:11:1.27:1,0,114	0/0:25,2:14:0.01:0,0,29	0/1:28,0:9:11.56:12,0,20	0/0:17,0:18:28.57:0,29,227	0/0:22,0:22:44.67:0,45,355	0/0:14,1:16:22.62:0,23,301	0/0:36,0:36:51.89:0,52,215	0/1:21,0:21:9.44:9,0,197	1/1:10,16:24:40.99:257,41,0	0/1:8,7:15:11.07:124,0,11	0/0:13,0:13:28.75:0,29,160	0/0:23,0:22:52.97:0,53,360	0/0:15,1:16:12.76:0,13,156	1/1:16,1:17:8.94:79,9,0	1/1:18,1:17:4.14:84,4,0	0/0:21,0:21:17.35:0,17,239	1/1:17,8:25:25.27:225,25,0	0/1:11,6:16:81.53:82,0,82	1/1:9,8:17:29.52:178,30,0	1/1:3,2:5:8.85:57,9,0	0/0:11,0:11:29.28:0,29,188	0/1:18,3:20:19.49:19,0,116	0/0:20,1:20:21.36:0,21,189	0/1:6,19:25:60.71:151,0,61	0/1:16,8:23:21.35:170,0,21	0/1:28,5:33:27.88:163,0,28	0/1:4,3:8:53.82:60,0,54
chr10	43803681	.	A	AC	529.12	PASS	AB=0.933;AC=10;AF=0.179;AN=56;BaseQRankSum=4.670;DP=582;FS=6.150;HRun=0;HaplotypeScore=109.1877;InbreedingCoeff=0.3472;MQ=65.79;MQ0=13;MQRankSum=-3.469;QD=3.62;ReadPosRankSum=1.944;VQSLOD=2.8317;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:76.26:0,76,822	0/0:10,0:10:28.55:0,29,303	0/0:29,0:16:13.75:0,14,198	0/0:30,0:10:3.53:0,4,41	0/0:18,0:18:43.41:0,43,424	0/0:23,0:23:53.69:0,54,592	0/0:16,0:16:48.01:0,48,518	0/0:36,0:37:90.45:0,90,561	0/0:21,0:21:59.35:0,59,568	0/0:25,0:23:62.92:0,63,556	0/0:15,0:15:37.23:0,37,331	0/1:13,1:14:0.16:116,0,0	0/1:24,0:23:8.72:9,0,125	0/1:15,0:15:32.77:54,0,33	0/1:9,9:18:14.13:105,0,14	1/1:8,12:18:15.42:184,15,0	0/0:22,0:22:62.92:0,63,629	0/0:26,0:26:67.58:0,68,614	0/0:18,0:17:46.06:0,46,425	0/0:19,0:19:50.95:0,51,449	0/0:5,0:5:12:0,12,105	0/1:12,0:12:7.91:8,0,36	1/1:19,1:19:0.28:106,0,0	0/1:23,0:22:0.02:88,0,0	0/0:25,0:25:45.34:0,45,437	0/0:24,0:23:69:0,69,643	0/0:34,0:34:93.87:0,94,841	0/0:9,0:9:24.02:0,24,239
chr10	43803682	.	A	AC	825.84	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-5.722;DP=583;FS=6.236;HRun=0;HaplotypeScore=108.5314;InbreedingCoeff=0.8750;MQ=65.08;MQ0=13;MQRankSum=3.346;QD=22.94;ReadPosRankSum=-3.238;VQSLOD=3.5155;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:78.98:0,79,848	0/0:10,0:10:29.51:0,30,314	0/0:26,0:14:14.95:0,15,157	0/0:30,0:10:7.26:0,7,44	0/0:18,0:18:43.39:0,43,427	0/0:23,0:23:53.69:0,54,595	0/0:16,0:16:48.01:0,48,520	1/1:3,33:36:82.80:921,83,0	0/0:21,0:21:59.38:0,59,568	0/0:25,0:23:59.95:0,60,532	0/0:16,0:16:37.23:0,37,331	0/0:14,0:14:18.70:0,19,155	0/0:23,1:23:40.83:0,41,384	0/0:15,0:15:25.04:0,25,186	0/0:18,0:18:31.63:0,32,166	0/0:20,0:18:42.81:0,43,201	0/0:22,0:22:62.88:0,63,629	0/0:26,0:26:67.60:0,68,616	0/0:19,0:18:46.04:0,46,421	0/0:19,0:19:50.94:0,51,445	0/0:5,0:5:11.99:0,12,104	0/0:13,0:13:30.91:0,31,163	0/0:19,0:18:44.20:0,44,215	0/0:23,0:22:34.23:0,34,257	0/0:26,0:26:48.76:0,49,463	0/0:24,0:23:69.03:0,69,647	0/0:35,0:35:90.57:0,91,827	0/0:9,0:9:24.02:0,24,240
chr10	43803683	.	A	AAC	779.01	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=7.964;DP=581;FS=11.709;HRun=0;HaplotypeScore=118.6109;InbreedingCoeff=0.7562;MQ=65.15;MQ0=13;MQRankSum=-5.550;QD=11.98;ReadPosRankSum=3.105;VQSLOD=3.0162;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:70.01:0,70,902	0/0:10,0:10:29.85:0,30,336	0/1:27,0:14:13.02:13,0,131	0/0:28,0:10:8.23:0,8,80	0/0:18,0:18:47.60:0,48,486	0/0:23,0:23:44.02:0,44,603	0/0:16,0:16:48.02:0,48,554	0/0:34,0:34:92.31:0,92,713	0/0:21,0:21:59.13:0,59,631	0/0:26,0:24:60.55:0,61,587	0/0:16,0:16:41.93:0,42,406	0/0:14,0:14:38.79:0,39,434	0/0:24,0:23:69.03:0,69,867	0/0:14,0:14:35.03:0,35,421	1/1:9,7:18:19.41:375,19,0	1/1:9,9:18:30.99:518,31,0	0/0:22,0:22:58.90:0,59,635	0/0:26,0:26:69.11:0,69,638	0/0:20,0:19:48.76:0,49,470	0/0:18,0:18:51:0,51,484	0/0:6,0:6:15.01:0,15,141	0/0:13,0:13:39.05:0,39,503	0/0:19,0:18:42.95:0,43,477	0/0:24,0:23:62.05:0,62,722	0/0:26,0:26:48.20:0,48,494	0/0:24,0:23:66.08:0,66,670	0/0:35,0:35:94.22:0,94,918	0/0:9,0:9:24.05:0,24,267
chr10	43803740	.	ATGT	A	5394.97	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=11.926;DP=585;FS=0.000;HRun=0;HaplotypeScore=101.4153;InbreedingCoeff=0.9995;MQ=94.58;MQ0=0;MQRankSum=-7.872;QD=42.48;ReadPosRankSum=3.987;VQSLOD=6.3790;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:90.30:0,90,1999	0/0:8,0:8:24.08:0,24,544	0/0:21,0:21:54.19:0,54,1181	0/0:35,0:35:99:0,99,2115	0/0:24,0:24:72.23:0,72,1579	0/0:21,0:21:63.19:0,63,1364	0/0:15,0:15:42.14:0,42,947	0/0:41,0:41:99:0,123,2749	0/0:22,0:22:66.23:0,66,1476	0/0:24,0:24:69.24:0,69,1564	0/0:15,0:15:42.14:0,42,944	1/1:0,17:17:42.14:700,42,0	1/1:1,21:22:63.22:1049,63,0	1/1:1,14:15:39.13:650,39,0	1/1:0,13:12:33.11:549,33,0	1/1:2,12:14:36.12:599,36,0	0/0:29,0:29:84.29:0,84,1900	0/0:20,0:20:57.20:0,57,1290	0/0:24,0:24:69.20:0,69,1518	0/0:22,0:22:66.23:0,66,1495	0/0:20,0:20:60.21:0,60,1359	1/1:0,12:12:36.12:599,36,0	1/1:1,11:12:30.10:499,30,0	1/1:3,19:21:45.15:750,45,0	0/0:25,0:25:60.10:0,60,1360	0/0:20,0:20:54.19:0,54,1224	0/0:26,0:26:75.21:0,75,1633	0/0:15,0:15:45.15:0,45,1016
chr10	43804689	.	AC	A	1606.38	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.525;DP=668;FS=1.816;HRun=4;HaplotypeScore=64.6469;InbreedingCoeff=0.9977;MQ=71.51;MQ0=0;MQRankSum=-1.123;QD=27.70;ReadPosRankSum=2.104;VQSLOD=3.3083;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,120,1673	0/0:8,0:8:24.08:0,24,335	0/0:25,0:25:68.36:0,68,933	0/0:22,0:22:62.18:0,62,798	0/0:21,0:21:60.18:0,60,807	0/0:26,0:26:75.25:0,75,1049	0/0:17,0:17:51.16:0,51,699	0/0:37,0:37:99:0,111,1505	0/0:18,0:18:54.18:0,54,756	0/0:38,0:38:99:0,108,1512	0/0:22,0:22:66.22:0,66,917	0/0:28,0:28:84.27:0,84,1158	0/0:26,0:26:78.26:0,78,1091	0/0:15,0:15:45.09:0,45,591	1/1:1,35:36:96.29:1152,96,0	1/1:1,21:22:48.15:576,48,0	0/0:18,0:18:51.17:0,51,714	0/0:12,0:12:33.04:0,33,405	0/0:13,0:13:36.11:0,36,488	0/0:33,0:33:93.30:0,93,1283	0/0:35,0:35:99:0,99,1368	0/0:23,0:23:69.23:0,69,966	0/0:19,0:19:57.18:0,57,774	0/0:17,0:17:48.16:0,48,672	0/0:27,0:27:78.25:0,78,1075	0/0:37,0:37:99:0,108,1497	0/0:23,0:23:69.23:0,69,964	0/0:8,0:8:24.08:0,24,336
chr10	43805690	.	GGCTCTC	G	2870.38	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.359;DP=685;FS=1.966;HRun=0;HaplotypeScore=141.6964;InbreedingCoeff=0.9975;MQ=92.30;MQ0=0;MQRankSum=-10.632;QD=57.41;ReadPosRankSum=2.201;VQSLOD=4.0065;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,108,3827	0/0:7,0:7:21.07:0,21,698	0/0:31,0:31:84.25:0,84,2645	0/0:28,0:28:75.26:0,75,2338	0/0:33,0:33:90.31:0,90,3089	0/0:31,0:31:87.28:0,87,3039	0/0:24,0:24:72.25:0,72,2473	0/0:30,0:30:90.30:0,90,3065	0/0:17,0:17:48.16:0,48,1705	0/0:20,0:20:57.19:0,57,1897	0/0:23,0:23:63.22:0,63,2221	0/0:25,0:25:72.25:0,72,2384	0/0:27,0:27:81.28:0,81,2798	0/0:19,0:19:57.20:0,57,1898	1/1:2,24:26:69.24:1657,69,0	1/1:0,24:24:57.20:1335,57,0	0/0:33,0:33:99:0,99,3422	0/0:12,0:12:33.11:0,33,1189	0/0:20,0:20:60.21:0,60,1988	0/0:31,0:31:93.32:0,93,3247	0/0:23,0:23:69.24:0,69,2421	0/0:18,0:18:54.19:0,54,1943	0/0:28,0:28:84.27:0,84,2835	0/0:21,0:21:63.22:0,63,2211	0/0:25,0:25:69.22:0,69,2254	0/0:27,0:27:81.28:0,81,2788	0/0:33,0:33:93.32:0,93,3070	0/0:12,0:11:30.10:0,30,1021
chr10	43805978	.	G	GAGAAAT	5046.55	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-7.456;DP=602;FS=0.540;HRun=0;HaplotypeScore=120.9962;InbreedingCoeff=0.9815;MQ=82.53;MQ0=0;MQRankSum=-10.822;QD=91.76;ReadPosRankSum=2.803;VQSLOD=6.5082;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,111,2482	0/0:8,0:8:21.07:0,21,497	0/0:18,0:18:48.15:0,48,982	0/0:21,0:22:60.16:0,60,1249	0/0:31,0:31:93.32:0,93,2169	0/0:20,0:20:60.21:0,60,1418	0/0:18,0:18:54.19:0,54,1231	0/0:26,0:26:72.25:0,72,1678	0/0:23,0:23:60.19:0,60,1373	0/0:10,0:10:27.09:0,27,639	0/0:24,0:24:69.24:0,69,1611	0/0:22,0:22:57.20:0,57,1318	0/0:14,0:14:36.11:0,36,798	0/0:10,0:10:30.10:0,30,709	1/1:6,25:31:90.27:3064,90,0	1/1:4,19:24:63.11:1983,63,0	0/0:24,0:24:66.19:0,66,1421	0/0:21,0:21:57.17:0,57,1300	0/0:25,0:25:72.24:0,72,1632	0/0:25,0:25:75.26:0,75,1752	0/0:16,0:16:39.13:0,39,915	0/0:19,0:19:51.17:0,51,1197	0/0:21,0:21:63.20:0,63,1443	0/0:31,0:31:90.29:0,90,2040	0/0:21,0:21:60.17:0,60,1343	0/0:31,0:31:78.26:0,78,1800	0/0:24,0:24:72.20:0,72,1516	0/0:4,0:4:12.04:0,12,284
chr10	43806350	.	A	AG	2648.88	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-1.984;DP=756;FS=0.974;HRun=3;HaplotypeScore=110.3453;InbreedingCoeff=0.9995;MQ=85.96;MQ0=1;MQRankSum=-3.473;QD=36.79;ReadPosRankSum=2.010;VQSLOD=3.2472;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,102,1223	0/0:11,0:11:30.09:0,30,359	0/0:34,0:34:83.44:0,83,1015	0/0:32,0:32:86.73:0,87,993	0/0:30,0:30:81.25:0,81,970	0/0:25,0:25:54.21:0,54,808	0/0:29,0:29:81.25:0,81,971	0/0:23,0:23:57.17:0,57,682	0/0:24,1:25:30.28:0,30,786	0/0:26,0:26:66.19:0,66,783	0/0:22,0:22:66.20:0,66,792	0/0:36,0:36:99:0,102,1208	0/0:27,0:27:75.23:0,75,899	0/0:30,0:30:87.25:0,87,1031	1/1:0,36:36:96.32:1343,96,0	1/1:0,36:36:99:1427,102,0	0/0:28,0:28:78.22:0,78,923	0/0:19,0:19:57.17:0,57,683	0/0:25,0:25:66.19:0,66,781	0/0:24,0:23:66.19:0,66,781	0/0:33,0:32:90.26:0,90,1067	0/0:16,0:16:48.15:0,48,575	0/0:19,0:19:51.14:0,51,600	0/0:45,0:45:99:0,129,1547	0/0:18,0:18:51.16:0,51,612	0/0:25,0:25:72.14:0,72,831	0/0:28,0:28:81.25:0,81,970	0/0:17,0:17:51.09:0,51,563
chr10	43808264	.	G	GGTCAGAAGACAGCTCTGCGA	15868.26	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-1.489;DP=847;FS=16.367;HRun=0;HaplotypeScore=461.7938;InbreedingCoeff=0.9998;MQ=80.43;MQ0=0;MQRankSum=-14.418;QD=154.06;ReadPosRankSum=-2.783;VQSLOD=4.1898;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:57:99:0,157,7720	0/0:15,0:15:42.14:0,42,2012	0/0:26,0:26:72.14:0,72,2533	0/0:25,0:25:62.71:0,63,1993	0/0:18,0:18:48.16:0,48,2354	0/0:31,0:31:90.27:0,90,4405	0/0:32,0:32:96.29:0,96,4546	0/0:35,0:35:99:0,99,4325	0/0:29,0:29:75.24:0,75,3609	0/0:25,0:25:69.24:0,69,3755	0/0:14,0:14:36.10:0,36,1600	0/0:36,0:36:99:0,105,5247	0/0:30,0:30:87.30:0,87,4501	0/0:40,0:40:99:0,111,5565	1/1:43,16:63:99:8893,141,0	1/1:27,10:40:93.11:6975,93,0	0/0:27,0:27:75.26:0,75,3994	0/0:28,0:28:75.22:0,75,3744	0/0:20,0:20:57.15:0,57,2564	0/0:21,0:21:57.09:0,57,2564	0/0:63,0:63:99:0,181,8422	0/0:22,0:22:63.13:0,63,3230	0/0:20,0:20:51.16:0,51,2462	0/0:46,0:46:99:0,132,6346	0/0:11,0:11:33.11:0,33,1795	0/0:30,0:30:78.24:0,78,3409	0/0:26,0:26:75.26:0,75,3348	0/0:17,0:17:51.18:0,51,2673
chr10	43808775	.	C	CTAT	10102.96	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-12.956;DP=838;FS=14.262;HRun=0;HaplotypeScore=124.4617;InbreedingCoeff=0.9882;MQ=86.13;MQ0=1;MQRankSum=-3.072;QD=51.28;ReadPosRankSum=2.402;VQSLOD=6.5513;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:58:99:0,175,2712	0/0:14,0:14:42.09:0,42,600	0/0:29,0:29:74.95:0,75,1128	0/0:28,0:28:69.15:0,69,993	0/0:27,0:27:63.15:0,63,917	0/0:26,0:26:72.23:0,72,1134	0/0:23,0:23:63.18:0,63,965	0/0:40,0:40:99:0,99,1525	0/0:28,0:27:75.26:0,75,1200	0/0:30,0:30:81.27:0,81,1283	0/0:17,0:17:48.16:0,48,771	1/1:1,40:41:99:2448,111,0	1/1:5,20:26:51.18:1123,51,0	1/1:7,35:42:99:2177,99,0	0/0:27,0:27:72.20:0,72,1087	0/0:36,0:36:99:0,105,1687	0/0:36,0:36:99:0,99,1591	0/0:23,0:23:60.20:0,60,959	0/0:23,0:23:60.19:0,60,918	0/0:19,0:19:54.18:0,54,861	0/0:75,0:75:99:0,214,3318	1/1:5,22:29:69.11:1424,69,0	1/1:2,17:21:56.80:1209,57,0	1/1:2,32:38:78.18:1721,78,0	0/0:20,0:20:57.19:0,57,915	0/0:36,0:36:99:0,105,1642	0/0:23,0:23:63.15:0,63,960	0/0:3,0:3:9.01:0,9,120
chr10	43810373	.	TG	T	518.88	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.011;DP=321;FS=6.684;HRun=2;HaplotypeScore=44.0807;InbreedingCoeff=0.7725;MQ=63.81;MQ0=2;MQRankSum=-2.714;QD=27.31;ReadPosRankSum=-0.114;VQSLOD=2.5735;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:44.77:0,45,674	0/0:1,0:1:3.01:0,3,45	0/0:14,0:10:12.36:0,12,303	0/0:20,0:17:38.64:0,39,562	0/0:5,0:5:12.04:0,12,179	0/0:12,0:11:33.10:0,33,472	0/0:17,0:17:48.15:0,48,698	0/0:31,0:31:84.27:0,84,1220	0/0:7,0:7:21.07:0,21,314	0/0:11,0:11:33.11:0,33,492	0/0:5,0:5:12.04:0,12,180	0/0:11,0:11:27.09:0,27,404	0/0:4,0:4:12.04:0,12,180	0/0:7,0:6:15.05:0,15,225	1/1:0,9:9:21.07:271,21,0	1/1:1,9:10:30.01:367,30,0	0/0:31,0:31:75.25:0,75,1124	0/0:16,0:16:45.15:0,45,671	0/0:9,0:7:16.79:0,17,248	0/0:12,0:11:33.11:0,33,488	0/0:10,0:10:24.08:0,24,360	0/0:3,0:3:9.03:0,9,133	0/0:4,0:4:12.04:0,12,179	0/0:16,0:16:42.13:0,42,629	0/0:2,0:2:6.01:0,6,71	0/0:16,0:15:42.14:0,42,622	0/0:16,0:16:45.15:0,45,673	0/0:5,0:5:15.05:0,15,225
chr10	43810587	.	CT	C	509.88	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.496;DP=574;FS=0.774;HRun=9;HaplotypeScore=58.8307;InbreedingCoeff=0.9694;MQ=62.15;MQ0=0;MQRankSum=-6.494;QD=17.00;ReadPosRankSum=0.592;VQSLOD=3.6571;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:38:99:0,108,1226	0/0:5,0:5:12.04:0,12,138	0/0:20,0:19:13.98:0,14,339	0/0:13,0:9:20.65:0,21,218	0/0:36,0:36:99:0,99,1132	0/0:15,0:15:45.12:0,45,511	0/0:19,0:19:51.14:0,51,579	0/0:33,0:33:72.17:0,72,796	0/0:17,0:17:45.12:0,45,511	0/0:28,0:28:78.22:0,78,892	0/0:29,0:29:72.21:0,72,831	0/0:14,0:14:33.10:0,33,380	0/0:11,0:11:27.08:0,27,312	0/0:19,0:19:51.15:0,51,586	1/1:2,16:18:45.02:411,45,0	1/1:2,10:12:24.01:219,24,0	0/0:25,0:25:36.62:0,37,603	0/0:22,0:22:60.12:0,60,658	0/0:18,0:18:39.07:0,39,435	0/0:29,0:29:81.24:0,81,935	0/0:14,0:14:39.12:0,39,450	0/0:13,0:13:30.08:0,30,338	0/0:13,0:13:30.09:0,30,344	0/0:10,0:10:30.07:0,30,335	0/0:16,0:16:45.13:0,45,519	0/0:26,0:26:63.18:0,63,718	0/0:34,0:34:99:0,102,1157	0/0:24,1:25:32.71:0,33,627
chr10	43811844	.	C	CT	1341.44	PASS	AB=1.000;AC=5;AF=0.096;AN=52;BaseQRankSum=-7.928;DP=569;FS=0.621;HRun=5;HaplotypeScore=56.6704;InbreedingCoeff=0.8610;MQ=74.52;MQ0=0;MQRankSum=-2.007;QD=25.31;ReadPosRankSum=2.129;VQSLOD=2.8515;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,105,1128	1/1:1,8:9:24.08:316,24,0	0/0:10,0:10:21:0,21,197	0/1:9,0:9:1.16:1,0,75	0/0:22,0:22:63.15:0,63,670	0/0:23,0:23:66.17:0,66,709	0/0:31,0:31:84.19:0,84,894	0/0:28,0:28:81.17:0,81,845	0/0:13,0:13:36.04:0,36,367	0/0:36,0:36:96.24:0,96,1032	0/0:21,0:21:60.14:0,60,638	0/0:29,0:29:81.19:0,81,862	0/0:14,0:14:36.07:0,36,378	0/0:20,0:20:60.15:0,60,645	./.	./.	1/1:3,32:35:87.28:1145,87,0	0/0:33,0:33:96.16:0,96,995	0/0:16,0:16:36.08:0,36,380	0/0:14,0:14:36.05:0,36,374	0/0:14,0:14:36.09:0,36,386	0/0:18,0:18:42.07:0,42,435	0/0:21,0:21:57.06:0,57,596	0/0:21,0:21:60.15:0,60,645	0/0:27,0:27:81.20:0,81,870	0/0:21,0:21:60.15:0,60,645	0/0:23,0:23:63.16:0,63,676	0/0:24,0:24:63.16:0,63,677
chr10	43812378	.	TTG	T	8875.87	PASS	AB=1.000;AC=39;AF=0.750;AN=52;BaseQRankSum=9.333;DP=697;FS=0.363;HRun=0;HaplotypeScore=96.3703;InbreedingCoeff=0.9112;MQ=66.56;MQ0=23;MQRankSum=0.721;QD=18.38;ReadPosRankSum=3.090;VQSLOD=4.5290;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:64,2:65:99:0,107,1944	1/1:5,9:14:17.89:197,18,0	0/0:38,1:22:38.96:0,39,528	0/0:36,0:19:27.87:0,28,350	0/0:25,0:23:69.12:0,69,1034	0/0:19,0:19:46.02:0,46,687	0/1:30,0:30:4.42:4,0,841	1/1:20,23:44:61.59:763,62,0	0/0:29,0:28:72.21:0,72,1107	1/1:13,18:29:39.22:607,39,0	1/1:5,9:14:11.99:130,12,0	1/1:6,19:25:43.70:610,44,0	1/1:1,14:15:36.11:440,36,0	1/1:2,20:22:42.03:513,42,0	./.	./.	1/1:8,22:32:50.65:555,51,0	1/1:6,25:31:50.23:687,50,0	1/1:7,14:19:44.85:481,45,0	1/1:7,15:22:56.84:649,57,0	1/1:6,23:27:48.15:587,48,0	1/1:8,11:16:21.02:240,21,0	1/1:4,14:19:23.85:253,24,0	1/1:2,25:27:36.07:423,36,0	1/1:5,19:25:35.88:398,36,0	1/1:6,17:23:43.60:576,44,0	1/1:3,21:24:51.11:621,51,0	1/1:1,12:13:12.04:142,12,0
chr10	43812861	.	C	CT	4380.53	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=-9.523;DP=720;FS=10.886;HRun=9;HaplotypeScore=68.0590;InbreedingCoeff=0.9479;MQ=71.28;MQ0=0;MQRankSum=0.094;QD=21.26;ReadPosRankSum=0.970;VQSLOD=5.1878;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:58.40:0,58,648	0/0:13,0:13:38.95:0,39,329	0/0:22,0:17:23.92:0,24,208	0/1:25,0:17:1.78:2,0,106	0/0:32,1:33:56.77:0,57,718	0/0:17,0:17:44.98:0,45,391	0/0:24,0:24:62.97:0,63,547	0/0:44,0:44:95.95:0,96,834	0/0:17,0:17:47.98:0,48,417	0/0:30,0:30:74.02:0,74,631	0/0:32,0:32:89.98:0,90,781	1/1:0,18:19:47.96:512,48,0	1/1:3,12:15:33.09:365,33,0	1/1:0,16:17:38.94:412,39,0	1/1:4,21:25:28.09:538,28,0	1/1:5,27:32:46.14:734,46,0	0/0:21,0:21:56.98:0,57,495	0/0:18,0:18:47.98:0,48,417	0/0:36,0:35:89.95:0,90,779	0/0:38,0:38:99:0,105,904	0/0:25,0:25:59.57:0,60,504	1/1:4,21:26:59.91:615,60,0	1/1:3,20:23:54.15:597,54,0	1/1:3,21:24:34.11:604,34,0	0/0:28,0:28:71.97:0,72,625	0/0:23,1:25:31.83:0,32,494	0/0:27,0:26:74.92:0,75,640	0/0:31,0:31:92.97:0,93,803
chr10	43813218	.	TAACTC	T	2454.61	PASS	AB=0.523;AC=3;AF=0.054;AN=56;BaseQRankSum=9.581;DP=704;FS=5.744;HRun=0;HaplotypeScore=138.6578;InbreedingCoeff=0.6484;MQ=86.12;MQ0=0;MQRankSum=-7.647;QD=54.55;ReadPosRankSum=2.656;VQSLOD=3.9861;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:78.27:0,78,2319	0/0:16,0:16:45.15:0,45,1391	0/0:23,0:23:66.22:0,66,1934	0/0:29,0:29:75.26:0,75,2180	0/0:34,0:34:96.33:0,96,2916	0/0:19,0:19:54.19:0,54,1666	0/0:22,0:22:60.21:0,60,1679	0/0:30,0:30:81.28:0,81,2398	0/0:33,0:33:93.30:0,93,2796	0/0:36,0:36:99:0,108,3281	0/0:27,0:27:72.25:0,72,1969	0/0:29,0:29:78.27:0,78,2342	0/0:20,0:20:60.21:0,60,1772	0/0:38,0:38:99:0,114,3465	1/1:2,20:22:66.22:1305,66,0	0/1:2,21:23:26.80:1256,0,27	0/0:26,0:26:72.25:0,72,2124	0/0:18,0:18:51.18:0,51,1579	0/0:22,0:22:60.21:0,60,1853	0/0:34,0:34:99:0,102,3077	0/0:12,0:12:36.12:0,36,1116	0/0:23,0:23:63.22:0,63,1889	0/0:27,0:27:72.25:0,72,2166	0/0:10,0:10:30.10:0,30,930	0/0:21,0:21:63.22:0,63,1825	0/0:34,0:34:96.32:0,96,2838	0/0:34,0:34:99:0,102,3146	0/0:12,0:12:36.12:0,36,1087
chr10	43813258	.	CA	C	658.57	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=11.292;DP=704;FS=0.558;HRun=1;HaplotypeScore=87.8945;InbreedingCoeff=0.9999;MQ=87.76;MQ0=0;MQRankSum=-9.458;QD=15.32;ReadPosRankSum=-0.741;VQSLOD=3.1151;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:81.25:0,81,1269	0/0:16,0:16:48.16:0,48,763	0/0:33,0:33:51.93:0,52,1126	0/0:18,0:18:36.16:0,36,672	0/0:33,0:33:96.31:0,96,1511	0/0:21,0:21:63.21:0,63,1002	0/0:18,0:18:54.18:0,54,863	0/0:30,0:30:87.26:0,87,1347	0/0:28,0:28:81.26:0,81,1268	0/0:30,0:30:87.28:0,87,1349	0/0:28,0:28:84.25:0,84,1294	0/0:28,0:28:84.29:0,84,1338	0/0:20,0:20:60.20:0,60,956	0/0:33,0:33:99:0,99,1581	1/1:0,21:21:61.45:386,61,0	1/1:1,21:22:64.11:394,64,0	0/0:24,0:24:72.25:0,72,1148	0/0:19,0:19:57.19:0,57,911	0/0:21,0:21:63.20:0,63,966	0/0:30,0:30:90.31:0,90,1436	0/0:20,0:20:60.14:0,60,907	0/0:21,0:21:60.19:0,60,929	0/0:24,0:24:72.23:0,72,1123	0/0:21,0:21:63.19:0,63,978	0/0:29,0:29:87.23:0,87,1338	0/0:40,0:40:99:0,117,1869	0/0:34,0:34:99:0,102,1630	0/0:15,0:15:45.15:0,45,711
chr10	43813260	.	CTTACCA	C	2143.70	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=11.016;DP=714;FS=0.000;HRun=0;HaplotypeScore=159.6567;InbreedingCoeff=0.9999;MQ=87.44;MQ0=0;MQRankSum=-10.568;QD=49.85;ReadPosRankSum=0.010;VQSLOD=3.4962;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:81.26:0,81,2959	0/0:16,0:16:48.16:0,48,1718	0/0:32,0:32:90.74:0,91,2902	0/0:19,0:19:38.35:0,38,1479	0/0:33,0:33:96.33:0,96,3609	0/0:21,0:21:63.20:0,63,2237	0/0:19,0:19:57.18:0,57,2034	0/0:29,0:29:84.28:0,84,3043	0/0:27,0:27:81.28:0,81,3030	0/0:30,0:30:87.28:0,87,3161	0/0:29,0:29:87.30:0,87,3151	0/0:30,0:30:90.30:0,90,3154	0/0:20,0:20:60.21:0,60,2259	0/0:34,0:34:99:0,102,3688	1/1:0,21:21:63.22:1112,63,0	1/1:1,21:22:66.23:1154,66,0	0/0:24,0:24:72.25:0,72,2711	0/0:20,0:20:60.21:0,60,2250	0/0:22,0:22:66.23:0,66,2490	0/0:30,0:30:90.30:0,90,3237	0/0:20,0:20:60.21:0,60,2236	0/0:21,0:21:63.17:0,63,2135	0/0:25,0:25:75.26:0,75,2749	0/0:22,0:22:66.21:0,66,2393	0/0:31,0:31:93.32:0,93,3411	0/0:40,0:40:99:0,120,4429	0/0:35,0:35:99:0,105,3855	0/0:15,0:15:45.15:0,45,1649
chr10	43813362	.	C	CT	3159.76	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=11.651;DP=737;FS=0.444;HRun=1;HaplotypeScore=73.7716;InbreedingCoeff=0.9997;MQ=70.82;MQ0=0;MQRankSum=-2.763;QD=36.32;ReadPosRankSum=3.570;VQSLOD=4.0331;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,108,1386	0/0:12,0:12:33.11:0,33,427	0/0:24,0:23:66.16:0,66,798	0/0:29,0:27:72:0,72,867	0/0:17,0:17:51.17:0,51,661	0/0:14,0:14:42.12:0,42,531	0/0:24,0:24:69.22:0,69,894	0/0:35,0:35:99:0,105,1323	0/0:41,0:41:99:0,123,1568	0/0:30,0:30:87.26:0,87,1102	0/0:28,0:28:81.25:0,81,1036	0/0:17,0:17:51.17:0,51,662	0/0:32,0:32:93.22:0,93,1155	0/0:42,0:42:99:0,117,1505	1/1:1,46:47:99:1953,132,0	1/1:2,38:40:57.33:1328,57,0	0/0:15,0:15:42.14:0,42,544	0/0:12,0:12:36.07:0,36,448	0/0:21,0:21:60.18:0,60,759	0/0:17,0:17:51.14:0,51,634	0/0:36,0:36:99:0,105,1332	0/0:16,0:16:45.14:0,45,571	0/0:18,0:18:51.17:0,51,662	0/0:18,0:18:54.13:0,54,682	0/0:25,0:25:72.22:0,72,920	0/0:27,0:27:81.24:0,81,1015	0/0:47,0:47:99:0,141,1828	0/0:16,0:16:48.09:0,48,574
chr10	43814563	.	T	TAC	4262.91	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=6.389;DP=597;FS=0.000;HRun=0;HaplotypeScore=78.1809;InbreedingCoeff=0.9984;MQ=90.28;MQ0=0;MQRankSum=-3.242;QD=52.63;ReadPosRankSum=-0.884;VQSLOD=5.2032;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,111,1778	0/0:12,0:12:36.04:0,36,529	0/0:21,0:21:60.68:0,61,962	0/0:27,0:27:69.23:0,69,1084	0/0:17,0:17:48.16:0,48,743	0/0:19,0:19:54.15:0,54,829	0/0:26,0:26:78.27:0,78,1267	1/1:3,25:30:78.13:1475,78,0	0/0:20,0:20:60.20:0,60,975	0/0:18,0:18:54.18:0,54,875	0/0:10,0:10:27.08:0,27,413	0/0:25,0:25:69.24:0,69,1106	0/0:15,0:15:45.15:0,45,729	0/0:20,0:20:57.19:0,57,923	1/1:0,19:19:48.16:973,48,0	1/1:1,30:32:90.31:1814,90,0	0/0:24,0:24:69.21:0,69,1095	0/0:19,0:19:57.18:0,57,905	0/0:21,0:21:60.20:0,60,978	0/0:13,0:13:33.11:0,33,529	0/0:43,0:43:99:0,126,1986	0/0:18,0:18:54.18:0,54,875	0/0:10,0:10:27.08:0,27,412	0/0:28,0:28:84.29:0,84,1370	0/0:9,0:9:24.08:0,24,389	0/0:21,0:21:63.22:0,63,1022	0/0:27,0:27:81.26:0,81,1281	0/0:14,0:14:42.12:0,42,648
chr10	43815034	.	GGTT	G	1195.29	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=4.060;DP=568;FS=0.753;HRun=0;HaplotypeScore=121.9732;InbreedingCoeff=0.9577;MQ=79.30;MQ0=1;MQRankSum=-2.058;QD=42.69;ReadPosRankSum=0.160;VQSLOD=4.7890;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,99,1104	0/0:11,0:11:33.09:0,33,366	0/0:30,0:24:43.55:0,44,808	0/0:21,0:14:7.77:0,8,461	0/0:36,0:36:99:0,108,1181	0/0:14,0:13:42.12:0,42,888	0/0:12,0:12:36.11:0,36,736	0/0:37,0:37:99:0,111,1273	0/0:11,0:11:33.10:0,33,755	0/0:25,0:25:74.91:0,75,787	0/0:30,0:30:84.20:0,84,906	0/0:12,0:12:30.08:0,30,333	0/0:9,0:9:27.08:0,27,317	0/0:12,0:12:33.07:0,33,356	1/1:0,11:11:30.10:552,30,0	1/1:0,17:17:42.14:765,42,0	0/0:22,0:22:63.14:0,63,679	0/0:29,0:29:72.19:0,72,798	0/0:16,0:16:48.11:0,48,556	0/0:29,0:29:84.21:0,84,920	0/0:8,0:8:24.04:0,24,265	0/0:10,0:10:30.04:0,30,305	0/0:16,0:16:42.02:0,42,417	0/0:9,0:9:21.06:0,21,233	0/0:36,0:36:99:0,105,1142	0/0:34,0:34:99:0,102,1150	0/0:24,0:24:63.02:0,63,687	0/0:10,0:10:30.08:0,30,333
chr10	43815035	.	GT	G	10574.85	PASS	AB=0.962;AC=47;AF=0.839;AN=56;BaseQRankSum=2.427;DP=569;FS=14.982;HRun=9;HaplotypeScore=66.4570;InbreedingCoeff=0.8483;MQ=79.06;MQ0=2;MQRankSum=-3.614;QD=21.15;ReadPosRankSum=3.863;VQSLOD=4.2448;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,33:37:86.98:788,87,0	1/1:0,11:11:33.02:302,33,0	0/0:32,0:24:40.30:0,40,366	0/1:23,1:15:13.41:13,0,176	1/1:0,35:35:99:959,105,0	0/0:13,0:13:38.94:0,39,421	0/0:12,0:12:30.08:0,30,337	1/1:9,28:37:76.20:724,76,0	0/0:11,0:11:30.09:0,30,346	1/1:5,19:24:56.98:507,57,0	1/1:0,30:30:84.05:767,84,0	1/1:0,12:12:30.02:275,30,0	1/1:1,8:9:24.01:220,24,0	1/1:1,11:12:30.02:275,30,0	1/1:11,0:11:21.80:67,22,0	1/1:17,0:17:29.21:87,29,0	1/1:1,20:21:57.03:522,57,0	1/1:0,29:29:72.04:659,72,0	1/1:3,13:16:7.40:322,7,0	1/1:1,28:29:77.96:713,78,0	1/1:3,5:8:15:137,15,0	1/1:2,8:10:24.01:219,24,0	1/1:4,11:15:26.93:247,27,0	1/1:0,9:9:21.01:192,21,0	1/1:2,33:35:96.05:879,96,0	1/1:2,32:34:96.05:878,96,0	1/1:1,23:24:60.03:549,60,0	1/1:0,10:10:30.02:275,30,0
chr10	43815379	.	GT	G	115.78	PASS	AB=0.768;AC=6;AF=0.107;AN=56;BaseQRankSum=0.575;DP=659;FS=5.591;HRun=16;HaplotypeScore=122.3133;InbreedingCoeff=0.4885;MQ=64.69;MQ0=10;MQRankSum=1.612;QD=1.05;ReadPosRankSum=2.562;VQSLOD=-0.1210;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,1:40:52.67:0,53,378	0/0:8,0:9:8.85:0,9,44	0/0:27,0:9:7.79:0,8,50	0/0:17,0:11:3.63:0,4,31	0/0:31,0:31:65.81:0,66,357	0/0:18,0:18:26.95:0,27,238	0/0:27,2:29:0.58:0,1,269	0/1:14,13:28:24.11:76,0,24	0/1:17,2:20:3.87:4,0,143	0/0:21,1:21:24.02:0,24,199	0/0:20,0:20:36.60:0,37,161	0/0:22,0:24:38.82:0,39,201	0/0:18,0:17:21.61:0,22,115	0/0:16,0:16:17.88:0,18,107	1/1:39,0:40:27.65:86,28,0	1/1:22,0:22:20.43:78,20,0	0/0:35,0:34:37.14:0,37,176	0/0:33,2:34:51.74:0,52,379	0/0:33,0:32:61.94:0,62,306	0/0:21,1:22:7.51:0,8,166	0/0:30,1:30:52.19:0,52,337	0/0:10,0:10:15.63:0,16,85	0/0:11,0:11:20.56:0,21,90	0/0:15,1:16:4.99:0,5,59	0/0:15,0:14:25.58:0,26,143	0/0:30,0:29:56.94:0,57,317	0/0:27,0:27:26.37:0,26,213	0/0:13,0:13:25.34:0,25,119
chr10	43815393	.	TTTG	T	935.85	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=3.838;DP=671;FS=30.854;HRun=0;HaplotypeScore=136.0133;InbreedingCoeff=0.1597;MQ=57.34;MQ0=13;MQRankSum=-1.282;QD=3.70;ReadPosRankSum=-3.300;VQSLOD=0.2488;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,103,1245	0/0:6,0:6:6.89:0,7,25	0/0:28,0:5:6.36:0,6,21	0/1:21,0:7:7.84:25,0,8	0/0:30,0:30:76.12:0,76,1074	0/0:18,0:18:38.33:0,38,532	0/0:24,0:24:18.14:0,18,516	0/0:35,0:35:14.25:0,14,489	0/0:20,0:20:45.40:0,45,455	0/0:24,0:23:53.39:0,53,625	0/0:22,0:22:49.72:0,50,620	0/1:24,0:24:53.53:54,0,147	0/1:15,0:14:35.52:36,0,78	0/1:15,0:15:51.69:52,0,72	1/1:38,2:40:86.29:569,86,0	1/1:27,2:29:34.87:261,35,0	0/1:37,0:35:62.16:62,0,64	0/0:39,0:38:97.66:0,98,1253	0/1:27,0:25:0.21:0,0,623	0/0:20,0:20:54.46:0,54,603	0/0:31,0:29:81:0,81,1012	0/1:12,0:12:1.39:1,0,154	0/1:13,0:13:5.15:5,0,85	0/1:20,0:17:26.48:26,0,54	0/0:11,0:10:27.07:0,27,384	0/0:37,0:34:87.60:0,88,1116	0/0:22,0:22:63.15:0,63,866	0/0:12,0:12:32.88:0,33,422
chr10	43815395	.	TG	T	2115.86	PASS	AB=0.995;AC=19;AF=0.339;AN=56;BaseQRankSum=6.701;DP=663;FS=104.817;HRun=1;HaplotypeScore=107.7929;InbreedingCoeff=0.2594;MQ=55.20;MQ0=12;MQRankSum=-1.555;QD=7.32;ReadPosRankSum=-1.166;VQSLOD=-0.1203;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:98.10:0,98,823	1/1:5,1:6:5.79:16,6,0	0/0:26,0:5:10.76:0,11,58	0/1:20,0:7:20.81:21,0,43	0/0:29,0:29:67.76:0,68,684	0/1:18,0:18:40.28:40,0,260	0/1:24,0:24:20.76:21,0,242	0/0:37,0:37:8.25:0,8,407	0/1:20,0:20:1.75:2,0,229	0/0:21,0:20:51.76:0,52,391	0/0:20,0:20:49.42:0,49,421	0/1:21,1:22:52.86:150,0,53	0/1:15,0:14:3.47:139,0,3	0/1:14,0:14:22.60:158,0,23	1/1:38,2:40:99:755,110,0	1/1:26,1:27:47.49:374,47,0	1/1:36,0:34:48.06:361,48,0	0/0:42,0:41:85.74:0,86,797	0/0:27,0:26:19.63:0,20,495	0/0:21,0:21:36.63:0,37,368	0/0:32,0:30:66.20:0,66,663	0/1:12,0:12:42.95:44,0,43	0/1:14,0:14:23.99:93,0,24	1/1:21,0:18:0.62:119,1,0	0/0:11,0:10:26.91:0,27,239	0/0:37,0:34:84.87:0,85,773	0/0:22,0:22:53.39:0,53,505	0/0:12,0:12:32.62:0,33,288
chr10	43815404	.	TG	T	2005.37	PASS	AB=0.991;AC=20;AF=0.357;AN=56;BaseQRankSum=7.358;DP=649;FS=118.226;HRun=1;HaplotypeScore=102.2744;InbreedingCoeff=0.6550;MQ=56.38;MQ0=13;MQRankSum=-1.856;QD=8.19;ReadPosRankSum=-5.931;VQSLOD=0.1734;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:63.82:0,64,871	1/1:1,4:5:7.26:72,7,0	0/0:23,1:9:10.74:0,11,165	0/0:23,1:10:11.15:0,11,182	0/0:29,0:29:66.41:0,66,835	0/0:17,0:17:2.54:0,3,379	0/0:27,0:27:15.08:0,15,444	0/0:32,0:32:44.85:0,45,799	0/1:21,0:21:17.61:18,0,435	0/0:25,0:24:57.22:0,57,573	0/0:18,0:18:44.83:0,45,465	1/1:18,1:19:37.75:299,38,0	1/1:17,0:16:30.43:230,30,0	1/1:13,1:14:37.31:266,37,0	0/1:40,0:40:79.35:79,0,256	0/1:26,1:27:86.57:93,0,87	1/1:31,3:32:74.09:611,74,0	0/0:46,0:46:95.92:0,96,1201	0/1:22,0:21:2.99:3,0,468	0/0:25,0:25:34.45:0,34,617	0/0:25,0:23:52:0,52,705	1/1:10,1:11:12.83:100,13,0	1/1:12,2:14:26.83:225,27,0	1/1:21,0:18:32.87:211,33,0	0/0:11,0:10:22.51:0,23,241	0/0:34,0:31:25.95:0,26,822	0/0:23,0:23:57.52:0,58,667	0/0:12,0:12:14.90:0,15,342
chr10	43815786	.	CTGCT	C	5604.23	PASS	AB=0.500;AC=33;AF=0.688;AN=48;BaseQRankSum=9.533;DP=359;FS=0.000;HRun=0;HaplotypeScore=56.2620;InbreedingCoeff=0.8441;MQ=55.41;MQ0=7;MQRankSum=-7.969;QD=26.07;ReadPosRankSum=4.531;VQSLOD=4.2386;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:81.28:0,81,2148	./.	0/0:7,0:5:15.05:0,15,367	0/0:6,0:6:18.06:0,18,443	0/0:8,0:8:24.07:0,24,526	0/0:11,0:11:33.10:0,33,791	0/0:40,0:40:99:0,117,2966	1/1:2,8:10:21.05:360,21,0	0/0:19,0:19:57.20:0,57,1434	1/1:4,8:12:21.04:357,21,0	./.	1/1:0,14:14:15.05:280,15,0	1/1:0,9:9:9.03:168,9,0	1/1:1,26:26:36.12:671,36,0	1/1:0,8:8:15.05:280,15,0	1/1:0,6:6:6.02:112,6,0	1/1:0,18:13:24.08:448,24,0	1/1:0,31:27:57.19:1047,57,0	1/1:4,9:12:24.08:446,24,0	1/1:1,7:8:3.01:56,3,0	./.	./.	0/1:0,5:5:0:0,0,0	1/1:1,18:17:23.94:447,24,0	1/1:3,5:8:3.01:56,3,0	1/1:0,8:8:18.06:318,18,0	1/1:0,14:14:23.87:448,24,0	1/1:0,5:5:6.02:112,6,0
chr10	43815935	.	TA	T	3142.56	PASS	AB=0.783;AC=23;AF=0.411;AN=56;BaseQRankSum=2.938;DP=575;FS=11.854;HRun=13;HaplotypeScore=80.4272;InbreedingCoeff=0.8475;MQ=69.46;MQ0=8;MQRankSum=1.696;QD=12.77;ReadPosRankSum=1.731;VQSLOD=2.8660;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,2:23:13.15:0,13,423	0/0:6,0:7:14.16:0,14,160	0/0:39,0:19:32.27:0,32,236	0/0:54,0:25:52.21:0,52,397	0/1:13,5:18:23.68:24,0,264	0/0:13,0:13:9.33:0,9,231	0/0:20,0:21:30.67:0,31,418	1/1:6,19:24:56.39:403,56,0	0/0:17,1:18:20.06:0,20,334	1/1:1,13:14:32.69:234,33,0	1/1:5,20:25:20.39:298,20,0	0/0:17,0:17:32.99:0,33,306	0/0:13,0:13:27.04:0,27,263	0/0:18,1:19:5.11:0,5,202	0/0:9,0:9:14.75:0,15,69	0/0:9,0:8:9.52:0,10,32	0/0:27,2:29:34.23:0,34,625	1/1:10,18:27:56.58:412,57,0	1/1:1,6:8:19.93:137,20,0	1/1:2,25:27:65.62:481,66,0	1/1:4,4:11:21:127,21,0	0/0:24,3:27:0.35:0,0,469	0/0:16,1:17:36.06:0,36,350	0/0:10,0:13:23.71:0,24,203	1/1:3,20:25:19.65:289,20,0	1/1:4,19:23:27.17:307,27,0	1/1:5,11:16:26.83:197,27,0	1/1:7,19:26:62.57:452,63,0
chr10	43815948	.	AGG	A	361.40	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.071;DP=612;FS=15.651;HRun=2;HaplotypeScore=101.0463;InbreedingCoeff=0.9810;MQ=71.50;MQ0=4;MQRankSum=-5.208;QD=20.08;ReadPosRankSum=-0.105;VQSLOD=0.2842;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:63.17:0,63,873	0/0:12,0:12:36.10:0,36,546	0/0:53,0:25:46.12:0,46,641	0/0:68,0:31:74.97:0,75,785	0/0:17,0:17:44.88:0,45,656	0/0:12,0:12:36.10:0,36,546	0/0:18,0:18:54.18:0,54,838	0/0:32,0:31:93.25:0,93,1250	0/0:17,0:17:51.08:0,51,756	0/0:19,0:19:51.04:0,51,681	0/0:26,0:26:69.02:0,69,855	0/0:17,0:17:36.12:0,36,549	0/0:13,0:13:39.13:0,39,606	0/0:17,0:17:39.03:0,39,573	1/1:2,7:9:21.07:286,21,0	1/1:5,4:9:12.04:191,12,0	0/0:31,0:31:90.11:0,90,1371	0/0:27,0:27:75.18:0,75,894	0/0:12,0:12:35.74:0,36,382	0/0:30,0:30:83.72:0,84,990	0/0:13,0:13:38.96:0,39,445	0/0:26,0:26:78.26:0,78,1205	0/0:18,0:18:54.10:0,54,835	0/0:14,0:14:30.01:0,30,424	0/0:25,0:25:57.05:0,57,675	0/0:21,0:21:59.80:0,60,671	0/0:13,0:13:33.05:0,33,379	0/0:22,0:22:64.74:0,65,753
chr10	43816024	.	T	TATTC	1256.16	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-6.412;DP=547;FS=3.420;HRun=0;HaplotypeScore=85.3153;InbreedingCoeff=0.8360;MQ=64.52;MQ0=3;MQRankSum=-0.552;QD=33.95;ReadPosRankSum=-0.182;VQSLOD=3.6162;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:36.12:0,36,571	1/1:8,1:9:3.01:72,3,0	0/0:14,0:13:12.04:0,12,181	0/0:17,0:13:11.31:0,11,154	0/0:19,0:19:36.12:0,36,562	0/0:22,0:22:51.16:0,51,790	0/0:27,0:27:45.15:0,45,718	0/0:34,0:34:33.10:0,33,474	0/0:19,0:19:45.15:0,45,718	0/0:23,0:23:48.16:0,48,766	0/0:22,0:22:42.14:0,42,670	0/0:12,0:12:21.07:0,21,335	0/0:16,0:16:30.10:0,30,479	0/0:23,0:23:54.18:0,54,848	0/0:18,0:18:33.03:0,33,527	0/0:21,0:21:32.18:0,32,525	1/1:7,21:27:54.19:1293,54,0	0/0:14,0:14:27.07:0,27,402	0/0:15,0:14:10.12:0,10,157	0/0:22,0:22:36.10:0,36,550	0/0:14,0:14:27.09:0,27,426	0/0:19,0:19:33.10:0,33,500	0/0:17,0:17:24.08:0,24,371	0/0:11,0:11:15.05:0,15,239	0/0:25,0:25:60.20:0,60,953	0/0:20,0:19:36.12:0,36,575	0/0:17,0:16:42.14:0,42,667	0/0:34,0:34:69.24:0,69,1102
chr10	43817453	.	T	TAGGGGG	34619.11	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=13.948;DP=556;FS=0.369;HRun=0;HaplotypeScore=257.2953;InbreedingCoeff=0.9756;MQ=92.00;MQ0=0;MQRankSum=-16.139;QD=81.46;ReadPosRankSum=2.829;VQSLOD=5.2534;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:21,12:34:87.28:2740,87,0	1/1:2,4:6:18.06:589,18,0	0/0:32,0:32:90.14:0,90,1944	0/0:30,0:30:81.24:0,81,1847	1/1:12,7:19:13.75:1305,14,0	0/0:24,0:24:72.24:0,72,1657	0/0:17,0:17:48.15:0,48,1099	1/1:28,4:32:84.27:2578,84,0	0/0:28,0:28:84.28:0,84,2007	1/1:21,8:29:84.27:2610,84,0	1/1:6,8:14:36.11:1040,36,0	1/1:14,11:25:75.24:2231,75,0	1/1:8,14:22:66.23:2111,66,0	1/1:6,11:17:51.16:1525,51,0	1/1:32,0:32:93.19:2198,93,0	1/1:25,0:25:75.20:1844,75,0	1/1:10,5:15:36.12:1207,36,0	1/1:2,2:4:9.03:236,9,0	1/1:11,3:14:38.97:1115,39,0	1/1:7,5:12:36.12:1045,36,0	1/1:4,3:7:15.05:500,15,0	1/1:11,8:19:45.14:1338,45,0	1/1:7,5:12:30.09:885,30,0	1/1:10,5:15:33.29:944,33,0	1/1:7,7:14:42.13:1316,42,0	1/1:10,18:28:81.28:2615,81,0	1/1:9,13:22:54.53:1857,55,0	1/1:2,6:8:24.08:789,24,0
chr10	43817454	.	A	AGGG	9157.11	PASS	AB=1.000;AC=45;AF=0.804;AN=56;BaseQRankSum=13.516;DP=375;FS=7.349;HRun=0;HaplotypeScore=192.1417;InbreedingCoeff=0.8428;MQ=107.99;MQ0=0;MQRankSum=-14.900;QD=37.53;ReadPosRankSum=5.289;VQSLOD=5.0615;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:15:42.10:504,42,0	1/1:4,0:4:12.04:156,12,0	0/0:30,0:30:90.14:0,90,1567	0/0:30,0:30:87.24:0,87,1521	0/1:12,0:12:17.83:385,0,18	0/0:26,0:26:72.24:0,72,1302	0/0:16,0:16:48.16:0,48,886	1/1:11,0:11:24.06:318,24,0	0/0:29,0:29:84.28:0,84,1536	1/1:13,0:13:33.09:412,33,0	1/1:9,0:10:27.07:331,27,0	1/1:14,0:14:42.12:546,42,0	1/1:14,0:14:42.13:526,42,0	1/1:12,0:13:39.10:469,39,0	1/1:3,16:19:57.17:1022,57,0	1/1:2,15:17:48.15:875,48,0	1/1:5,0:5:15.05:191,15,0	1/1:3,0:3:9.03:116,9,0	1/1:4,0:4:12.04:161,12,0	1/1:6,0:7:21.07:282,21,0	1/1:4,0:4:9.03:114,9,0	1/1:11,0:12:30.08:380,30,0	1/1:9,0:9:21.06:263,21,0	1/1:8,0:8:14.64:229,15,0	1/1:8,0:8:24.07:289,24,0	1/1:18,0:18:54.17:689,54,0	1/1:18,0:18:41.66:672,42,0	1/1:6,0:6:18.06:228,18,0
chr10	43817456	.	G	GAAA	5596.90	PASS	AB=1.000;AC=45;AF=0.804;AN=56;BaseQRankSum=15.001;DP=362;FS=10.584;HRun=2;HaplotypeScore=202.6741;InbreedingCoeff=0.8155;MQ=108.59;MQ0=0;MQRankSum=-14.952;QD=24.12;ReadPosRankSum=8.006;VQSLOD=1.0386;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:14:39.02:353,39,0	1/1:5,0:5:12.01:109,12,0	0/0:30,0:30:87.06:0,87,1446	0/0:29,0:29:84.24:0,84,1445	0/1:12,0:12:11.45:140,0,11	0/0:25,0:25:75.20:0,75,1301	0/0:18,0:18:54.14:0,54,933	1/1:9,0:9:12.01:113,12,0	0/0:28,0:28:84.27:0,84,1533	1/1:12,0:12:24.04:234,24,0	1/1:9,0:9:23.79:195,24,0	1/1:14,0:14:33.03:301,33,0	1/1:14,0:14:41.97:369,42,0	1/1:11,0:12:35.98:320,36,0	1/1:1,16:17:49.98:654,50,0	1/1:1,15:16:45.15:615,45,0	1/1:5,0:5:15.03:150,15,0	1/1:3,0:3:6.01:58,6,0	1/1:4,0:4:9.01:85,9,0	1/1:7,0:7:17.89:146,18,0	1/1:4,0:4:9.01:82,9,0	1/1:11,0:11:26.98:234,27,0	1/1:8,0:8:14.99:130,15,0	1/1:8,0:8:8.60:82,9,0	1/1:7,0:7:21.01:191,21,0	1/1:18,0:18:54.06:501,54,0	1/1:17,0:17:39.48:363,39,0	1/1:6,0:6:18.02:170,18,0
chr10	43817457	.	T	TACACCC	18761.26	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=15.111;DP=355;FS=12.832;HRun=0;HaplotypeScore=166.4741;InbreedingCoeff=0.9225;MQ=109.36;MQ0=0;MQRankSum=-14.746;QD=83.38;ReadPosRankSum=6.683;VQSLOD=5.1467;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,13:13:39.13:1256,39,0	1/1:1,3:5:15.04:407,15,0	0/0:30,0:30:87.29:0,87,2021	0/0:29,0:29:84.24:0,84,1917	1/1:5,7:12:24.08:713,24,0	0/0:24,0:24:72.20:0,72,1674	0/0:18,0:18:54.19:0,54,1304	1/1:3,4:7:18.04:457,18,0	0/0:29,0:29:84.29:0,84,2094	1/1:2,8:10:27.09:825,27,0	1/1:0,8:9:24.08:739,24,0	1/1:2,11:13:36.12:1118,36,0	1/1:1,13:15:42.14:1320,42,0	1/1:2,11:13:36.12:1138,36,0	1/1:1,16:17:49.98:1547,50,0	1/1:1,15:16:48.16:1484,48,0	1/1:0,5:5:15.05:441,15,0	1/1:0,2:2:6.02:196,6,0	1/1:1,3:4:9.03:293,9,0	1/1:2,5:7:16.87:475,17,0	1/1:1,3:4:9.03:286,9,0	1/1:2,9:11:27.09:852,27,0	1/1:3,5:8:21.06:568,21,0	1/1:2,4:7:9.21:292,9,0	1/1:0,7:7:21.07:675,21,0	1/1:1,18:19:54.19:1745,54,0	1/1:2,13:15:42.14:1352,42,0	1/1:0,6:6:18.06:583,18,0
chr10	43819725	.	CT	C	724.10	PASS	AB=0.802;AC=21;AF=0.375;AN=56;BaseQRankSum=-2.009;DP=524;FS=5.640;HRun=16;HaplotypeScore=83.1240;InbreedingCoeff=0.1864;MQ=67.21;MQ0=4;MQRankSum=2.840;QD=2.38;ReadPosRankSum=3.401;VQSLOD=-0.3619;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:24,3:28:11.68:12,0,245	0/0:4,0:6:8.83:0,9,64	0/1:22,1:17:10.99:11,0,34	0/0:7,0:6:4.72:0,5,16	0/0:16,0:17:2.81:0,3,122	0/1:16,2:18:12.53:13,0,145	0/1:23,4:27:23.64:24,0,220	0/0:29,2:32:22.71:0,23,240	0/0:15,0:15:22.67:0,23,215	1/1:11,4:21:21.74:101,22,0	1/1:12,8:24:20.52:107,21,0	0/0:15,0:17:6.47:0,6,107	0/0:10,0:12:8.99:0,9,44	0/0:10,0:10:20.26:0,20,119	0/0:12,0:20:20.27:0,20,120	0/0:14,1:22:8.72:0,9,119	0/1:21,3:24:33.23:33,0,190	1/1:7,7:15:18.63:117,19,0	0/1:13,7:21:41.58:102,0,42	0/1:9,5:15:33.62:39,0,34	1/1:8,6:13:8.46:53,8,0	0/0:12,1:27:22.42:0,22,189	0/0:8,1:19:7.87:0,8,107	0/0:6,0:10:17.36:0,17,107	1/1:6,5:11:10.70:60,11,0	0/1:15,11:25:11.73:137,0,12	0/1:5,11:17:25.99:55,0,26	1/1:4,6:10:0.17:43,0,0
chr10	43820211	.	A	AC	1864.10	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.971;DP=712;FS=22.908;HRun=2;HaplotypeScore=73.4547;InbreedingCoeff=1.0000;MQ=74.44;MQ0=0;MQRankSum=-0.800;QD=35.17;ReadPosRankSum=-0.351;VQSLOD=1.6444;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:90.28:0,90,1113	0/0:14,0:14:42.13:0,42,521	0/0:24,0:24:66.12:0,66,771	0/0:38,0:38:99:0,105,1289	0/0:17,0:17:51.16:0,51,632	0/0:16,0:16:45.14:0,45,558	0/0:22,0:22:63.18:0,63,768	0/0:26,0:26:69.21:0,69,846	0/0:35,0:35:99:0,105,1276	0/0:35,0:35:90.23:0,90,1078	0/0:15,0:15:45.13:0,45,545	0/0:25,0:25:69.22:0,69,853	0/0:20,0:20:57.17:0,57,694	0/0:25,0:25:66.21:0,66,818	1/1:2,30:32:84.28:1208,84,0	1/1:1,20:21:54.18:778,54,0	0/0:27,0:26:69.22:0,69,855	0/0:23,0:23:63.20:0,63,779	0/0:24,0:24:69.20:0,69,833	0/0:24,0:24:66.19:0,66,805	0/0:51,0:51:99:0,138,1695	0/0:18,0:18:54.17:0,54,669	0/0:25,0:25:69.22:0,69,851	0/0:31,0:31:93.27:0,93,1139	0/0:20,0:20:54.16:0,54,652	0/0:27,0:27:81.25:0,81,999	0/0:26,0:24:75.24:0,75,928	0/0:20,0:20:60.16:0,60,728
chr10	43821143	.	T	TTGTC	14511.65	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-11.983;DP=580;FS=0.000;HRun=0;HaplotypeScore=93.7849;InbreedingCoeff=0.9981;MQ=61.07;MQ0=5;MQRankSum=1.783;QD=41.58;ReadPosRankSum=0.695;VQSLOD=4.9313;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:96.31:0,96,1567	0/0:8,0:8:24.08:0,24,400	0/0:23,0:17:30.01:0,30,408	0/0:20,0:15:23.91:0,24,343	0/0:27,0:27:72.25:0,72,1209	0/0:15,0:15:36.11:0,36,579	0/0:21,0:21:45.13:0,45,694	1/1:16,5:22:36.11:717,36,0	0/0:17,0:17:45.12:0,45,703	1/1:5,14:20:51.16:1113,51,0	1/1:1,12:13:30.10:730,30,0	1/1:3,14:18:30.10:744,30,0	1/1:4,8:12:24.08:594,24,0	1/1:7,8:16:27.09:637,27,0	0/0:21,0:21:37.49:0,37,310	0/0:29,0:29:59.46:0,59,487	0/0:17,0:17:39.12:0,39,629	1/1:4,17:21:36.12:884,36,0	1/1:10,7:18:29.82:553,30,0	1/1:7,21:31:54.18:1267,54,0	1/1:7,10:19:27.09:660,27,0	1/1:3,14:16:27.09:625,27,0	1/1:4,10:18:42.14:1002,42,0	1/1:2,17:21:39.13:966,39,0	1/1:1,22:22:30.10:743,30,0	1/1:7,25:32:75.22:1646,75,0	1/1:2,21:25:35.63:885,36,0	1/1:5,14:19:30.10:744,30,0
chr10	43821153	.	GTCTGTCTA	G	2570.57	PASS	AB=1.000;AC=6;AF=0.107;AN=56;BaseQRankSum=0.441;DP=606;FS=2.073;HRun=0;HaplotypeScore=175.3642;InbreedingCoeff=0.7219;MQ=60.82;MQ0=5;MQRankSum=-6.220;QD=27.94;ReadPosRankSum=0.470;VQSLOD=3.6007;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,99,3793	0/0:8,0:8:24.08:0,24,959	0/0:28,0:18:35.71:0,36,910	0/0:24,0:16:36.05:0,36,1003	0/0:32,0:32:90.31:0,90,3566	0/0:21,0:21:60.17:0,60,1958	0/0:22,0:22:54.16:0,54,1709	0/1:24,0:23:0.33:0,0,1185	0/0:20,0:20:60.14:0,60,2085	0/1:21,0:21:5.79:6,0,1597	0/0:13,0:13:27.09:0,27,872	0/0:20,0:20:42.11:0,42,1243	0/0:11,0:11:24.08:0,24,811	0/0:15,0:15:18.06:0,18,574	1/1:1,20:21:39.13:1054,39,0	1/1:3,23:26:60.21:1635,60,0	0/0:19,0:19:48.15:0,48,1895	0/0:21,0:21:39.13:0,39,1350	0/0:18,0:17:39.01:0,39,908	0/0:33,0:33:63.19:0,63,1880	0/0:16,0:16:26.96:0,27,860	0/0:17,0:15:24.08:0,24,644	0/0:20,0:20:51.17:0,51,1535	0/0:23,0:23:45.15:0,45,1466	0/0:24,0:23:36.11:0,36,1142	0/0:30,0:29:30.26:0,30,1964	0/0:27,0:27:38.74:0,39,1302	0/0:17,0:17:30.10:0,30,1038
chr10	43821237	.	T	TCACTAGGTAGCCAGGCTTGG	7763.17	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=7.379;DP=553;FS=2.300;HRun=0;HaplotypeScore=279.1093;InbreedingCoeff=0.7794;MQ=68.85;MQ0=1;MQRankSum=-9.457;QD=125.21;ReadPosRankSum=1.705;VQSLOD=4.5009;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:81.28:0,81,4174	0/0:11,0:11:33.11:0,33,1804	0/0:18,0:17:48.16:0,48,1806	0/0:22,0:21:50.80:0,51,1486	0/0:22,0:22:63.22:0,63,3175	0/0:23,0:23:69.22:0,69,3427	0/0:35,0:35:99:0,99,4959	0/0:25,0:25:75.26:0,75,3481	0/0:18,0:18:54.17:0,54,2629	0/0:16,0:16:48.14:0,48,2194	0/0:16,0:16:48.16:0,48,2316	0/0:19,0:19:54.19:0,54,2981	0/0:13,0:13:39.13:0,39,2223	0/0:14,0:14:36.12:0,36,1932	1/1:16,8:24:51.18:4561,51,0	1/1:14,3:18:45.15:3183,45,0	0/0:27,0:27:81.28:0,81,4257	0/1:20,0:20:19.19:19,0,2649	0/0:17,0:16:48.15:0,48,1902	0/0:24,0:24:60.16:0,60,3073	0/0:19,0:18:51.16:0,51,2323	0/0:13,0:13:33.11:0,33,1729	0/0:19,0:19:54.19:0,54,2530	0/0:32,0:32:87.26:0,87,4363	0/0:12,0:12:33.11:0,33,1648	0/0:21,0:21:63.22:0,63,3375	0/0:20,0:20:54.66:0,55,2656	0/0:6,0:6:18.06:0,18,797
chr10	43821611	.	GT	G	1817.09	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=12.044;DP=681;FS=17.267;HRun=5;HaplotypeScore=74.6584;InbreedingCoeff=0.9988;MQ=78.29;MQ0=0;MQRankSum=-3.386;QD=28.84;ReadPosRankSum=2.879;VQSLOD=2.2357;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,114,1543	0/0:15,0:15:45.14:0,45,593	0/0:16,0:16:39.56:0,40,504	0/0:16,0:16:31.49:0,31,419	0/0:25,0:25:69.22:0,69,924	0/0:20,0:20:60.20:0,60,819	0/0:29,0:29:84.25:0,84,1112	0/0:45,0:45:99:0,123,1666	0/0:25,0:25:75.23:0,75,1008	0/0:36,0:36:99:0,99,1342	0/0:20,0:20:60.20:0,60,812	0/0:27,0:27:81.26:0,81,1093	0/0:21,0:21:57.18:0,57,766	0/0:15,0:15:45.15:0,45,615	1/1:0,30:30:81.23:918,81,0	1/1:2,31:32:90.26:1020,90,0	0/0:33,0:33:93.28:0,93,1251	0/0:9,0:9:27.06:0,27,335	0/0:20,0:20:57.14:0,57,724	0/0:23,0:23:66.22:0,66,898	0/0:44,0:44:99:0,126,1642	0/0:20,0:20:57.19:0,57,776	0/0:15,0:15:42.14:0,42,574	0/0:25,0:25:75.25:0,75,1026	0/0:10,0:10:30.10:0,30,410	0/0:27,0:27:75.25:0,75,1020	0/0:31,0:31:87.28:0,87,1169	0/0:12,0:12:33.11:0,33,451
chr10	43821718	.	CTTAG	C	2033.28	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.059;DP=671;FS=2.066;HRun=0;HaplotypeScore=113.0962;InbreedingCoeff=0.9998;MQ=75.15;MQ0=0;MQRankSum=-6.322;QD=43.26;ReadPosRankSum=1.259;VQSLOD=4.2675;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,108,2793	0/0:11,0:11:33.11:0,33,848	0/0:24,0:24:66.21:0,66,1598	0/0:22,0:22:60.20:0,60,1472	0/0:23,0:23:63.22:0,63,1624	0/0:15,0:15:45.15:0,45,1086	0/0:24,0:24:57.18:0,57,1437	0/0:39,0:39:99:0,108,2837	0/0:27,0:27:72.25:0,72,1859	0/0:29,0:29:81.28:0,81,2107	0/0:24,0:24:69.22:0,69,1780	0/0:30,0:30:87.30:0,87,2292	0/0:28,0:28:81.28:0,81,2118	0/0:20,0:20:57.18:0,57,1457	1/1:3,24:27:63.21:1153,63,0	1/1:1,19:19:54.19:1002,54,0	0/0:35,0:35:99:0,102,2639	0/0:13,0:13:39.13:0,39,979	0/0:20,0:20:57.16:0,57,1370	0/0:32,0:32:96.33:0,96,2472	0/0:34,0:34:96.33:0,96,2469	0/0:18,0:18:51.18:0,51,1360	0/0:16,0:16:45.15:0,45,1144	0/0:15,0:15:39.13:0,39,1034	0/0:24,0:24:69.24:0,69,1836	0/0:23,0:23:66.23:0,66,1718	0/0:17,0:17:51.18:0,51,1334	0/0:24,0:24:69.24:0,69,1840
chr10	43821765	.	C	CCCACTGAGAG	5626.87	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=4.277;DP=639;FS=2.133;HRun=0;HaplotypeScore=192.6772;InbreedingCoeff=0.9991;MQ=79.42;MQ0=1;MQRankSum=-10.099;QD=119.72;ReadPosRankSum=2.181;VQSLOD=5.3491;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:99:0,99,2977	0/0:11,0:11:27.09:0,27,828	0/0:30,0:30:75.24:0,75,2211	0/0:23,0:22:50.61:0,51,1309	0/0:23,0:23:66.19:0,66,1899	0/0:25,0:25:72.23:0,72,2154	0/0:24,0:24:69.20:0,69,2009	0/0:27,0:27:54.16:0,54,1359	0/0:28,0:28:75.26:0,75,2467	0/0:24,0:24:72.24:0,72,2137	0/0:25,0:25:68.96:0,69,1997	0/0:23,0:23:66.23:0,66,2089	0/0:28,0:28:84.28:0,84,2593	0/0:17,0:17:51.12:0,51,1446	1/1:10,13:23:60.19:2852,60,0	1/1:11,12:23:54.19:2774,54,0	0/0:33,0:32:96.33:0,96,3109	0/0:10,0:10:30.10:0,30,987	0/0:17,0:17:48.16:0,48,1427	0/0:31,0:31:84.28:0,84,2551	0/0:27,0:27:72.20:0,72,2063	0/0:20,0:20:57.18:0,57,1751	0/0:19,0:19:54.19:0,54,1752	0/0:11,0:11:33.10:0,33,956	0/0:19,0:19:57.20:0,57,1877	0/0:24,0:24:69.24:0,69,2209	0/0:25,0:25:72.23:0,72,2261	0/0:15,0:15:42.14:0,42,1364
chr10	43822625	.	A	AT	5408.57	PASS	AB=0.711;AC=40;AF=0.714;AN=56;BaseQRankSum=-4.832;DP=548;FS=0.429;HRun=12;HaplotypeScore=81.0067;InbreedingCoeff=0.5941;MQ=80.95;MQ0=2;MQRankSum=-1.609;QD=12.46;ReadPosRankSum=-0.176;VQSLOD=4.7217;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,0:33:40.84:205,41,0	0/0:4,0:4:8.94:0,9,66	0/0:32,0:29:4.67:0,5,194	0/1:28,0:17:7.72:8,0,53	1/1:4,0:19:17.12:120,17,0	0/0:18,0:19:46.73:0,47,333	0/0:23,0:26:71.71:0,72,499	1/1:8,24:33:65.68:585,66,0	0/0:14,0:15:37.80:0,38,268	1/1:3,16:19:20.22:358,20,0	1/1:0,8:10:23.71:204,24,0	1/1:7,0:12:21.28:107,21,0	1/1:6,0:21:17.04:86,17,0	1/1:2,2:16:5.64:28,6,0	1/1:6,16:23:29.37:256,29,0	1/1:3,19:22:32.18:474,32,0	0/0:16,0:17:37.45:0,37,283	1/1:2,30:34:77.80:729,78,0	0/1:11,11:22:22.71:274,0,23	1/1:4,16:20:29.13:436,29,0	1/1:3,10:13:2.13:182,2,0	1/1:3,0:12:12.30:59,12,0	1/1:4,1:13:25.46:134,25,0	1/1:1,2:12:20.05:115,20,0	1/1:3,17:21:41.90:394,42,0	0/1:6,11:20:5.96:264,0,6	0/1:5,14:20:10.81:215,0,11	1/1:4,6:10:18.03:175,18,0
chr10	43822740	.	GT	G	4301.29	PASS	AB=0.992;AC=29;AF=0.518;AN=56;BaseQRankSum=2.152;DP=542;FS=0.829;HRun=8;HaplotypeScore=72.0564;InbreedingCoeff=0.6821;MQ=79.53;MQ0=4;MQRankSum=0.797;QD=13.57;ReadPosRankSum=2.290;VQSLOD=4.6591;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:69.19:0,69,810	0/0:8,0:8:20.97:0,21,177	0/0:32,0:18:9.50:0,9,164	0/1:23,1:17:11.26:11,0,46	0/0:17,0:17:43.58:0,44,505	0/0:22,0:22:63.15:0,63,726	0/0:19,0:19:39.07:0,39,426	1/1:24,1:24:16.67:226,17,0	0/0:18,0:18:48.10:0,48,553	1/1:6,17:23:48.02:445,48,0	1/1:1,14:15:30.03:289,30,0	0/1:13,0:13:6.11:6,0,20	1/1:10,0:10:3.63:14,4,0	0/0:21,0:21:7.33:0,7,132	0/0:15,0:15:27.58:0,28,134	0/0:26,0:26:31.25:0,31,157	0/0:20,0:20:50.92:0,51,428	1/1:4,23:27:48.07:463,48,0	1/1:1,9:10:24.01:224,24,0	1/1:0,17:17:42:393,42,0	1/1:1,16:17:39.05:376,39,0	0/1:12,0:12:3.45:3,0,20	0/1:19,0:19:9.61:10,0,16	0/1:16,0:16:1.22:1,0,62	1/1:1,14:15:36.06:347,36,0	1/1:4,24:28:68.44:602,68,0	1/1:9,22:31:55.23:571,55,0	1/1:1,14:15:33.05:318,33,0
chr10	43822932	.	A	AAAACAAAAAC	2190.12	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=1.575;DP=608;FS=0.000;HRun=0;HaplotypeScore=171.5464;InbreedingCoeff=0.9638;MQ=62.68;MQ0=1;MQRankSum=-5.101;QD=42.94;ReadPosRankSum=2.544;VQSLOD=2.9847;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:87.30:0,87,2350	0/0:7,0:7:18.06:0,18,454	0/0:24,0:15:26.27:0,26,404	0/0:27,0:21:12.68:0,13,596	0/0:26,0:26:69.24:0,69,1885	0/0:21,0:21:57.17:0,57,1524	0/0:16,0:16:45.12:0,45,1065	0/0:39,0:39:90.27:0,90,1859	0/0:16,0:16:45.15:0,45,1154	0/0:26,0:26:60.19:0,60,1525	0/0:16,0:16:39.13:0,39,923	0/0:30,0:30:87.30:0,87,2324	0/0:17,0:17:48.16:0,48,1364	0/0:15,0:15:33.10:0,33,819	1/1:4,15:22:21.07:909,21,0	1/1:4,25:29:12.28:1397,12,0	0/0:27,0:27:65.98:0,66,1867	0/0:21,0:21:54.14:0,54,1318	0/0:20,0:20:51.16:0,51,1103	0/0:14,0:14:42.14:0,42,1256	0/0:15,0:15:39.13:0,39,1034	0/0:16,0:16:48.16:0,48,1172	0/0:12,0:12:30.10:0,30,697	0/0:26,0:26:69.22:0,69,1753	0/0:17,0:17:51.17:0,51,1326	0/0:22,0:22:60.21:0,60,1617	0/0:39,0:39:99:0,105,2659	0/0:16,0:16:39.69:0,40,1276
chr10	43824052	.	GC	G	1785.84	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.693;DP=657;FS=2.762;HRun=2;HaplotypeScore=68.3283;InbreedingCoeff=0.9993;MQ=69.65;MQ0=0;MQRankSum=-2.769;QD=33.70;ReadPosRankSum=0.509;VQSLOD=3.8633;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,114,1675	0/0:16,0:16:48.16:0,48,719	0/0:19,0:19:54.18:0,54,809	0/0:11,0:11:33.11:0,33,471	0/0:18,0:18:51.17:0,51,763	0/0:18,0:18:54.17:0,54,789	0/0:34,0:34:96.33:0,96,1435	0/0:24,0:24:66.22:0,66,987	0/0:24,0:24:72.20:0,72,1035	0/0:28,0:28:81.27:0,81,1213	0/0:9,0:9:27.09:0,27,404	0/0:30,0:30:84.28:0,84,1259	0/0:20,0:20:57.15:0,57,831	0/0:18,0:18:51.17:0,51,764	1/1:0,22:22:57.19:740,57,0	1/1:0,31:31:90.29:1168,90,0	0/0:26,0:26:66.21:0,66,969	0/0:26,0:26:78.24:0,78,1145	0/0:19,0:19:57.19:0,57,850	0/0:31,0:31:93.31:0,93,1390	0/0:40,0:40:99:0,117,1727	0/0:18,0:18:54.18:0,54,806	0/0:17,0:17:48.16:0,48,719	0/0:16,0:16:45.15:0,45,664	0/0:23,0:23:69.21:0,69,1012	0/0:31,0:31:90.78:0,91,1349	0/0:30,0:30:90.27:0,90,1319	0/0:18,0:18:54.18:0,54,803
chr10	43824103	.	CT	C	1795.47	PASS	AC=12;AF=0.222;AN=54;BaseQRankSum=4.107;DP=600;FS=8.567;HRun=10;HaplotypeScore=68.9718;InbreedingCoeff=0.9553;MQ=70.01;MQ0=3;MQRankSum=-1.336;QD=17.26;ReadPosRankSum=1.850;VQSLOD=4.1061;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,1:38:82.21:0,82,1117	0/0:4,0:12:22.68:0,23,112	0/0:28,1:18:12.71:0,13,312	0/0:18,0:10:14.75:0,15,133	0/0:26,0:28:77.87:0,78,818	0/0:19,0:19:54.09:0,54,583	0/0:27,0:27:69.17:0,69,752	0/0:7,0:40:82.73:0,83,441	0/0:16,0:16:36.10:0,36,398	0/0:30,0:30:84.23:0,84,928	0/0:11,0:11:30.07:0,30,322	1/1:3,18:21:41.98:365,42,0	1/1:2,16:18:44.99:391,45,0	1/1:4,12:16:29.99:260,30,0	./.	0/0:11,0:11:0:0,0,0	0/0:4,0:37:82.55:0,83,431	0/0:26,0:26:69.13:0,69,740	0/0:23,0:22:54.13:0,54,583	0/0:25,0:25:69.19:0,69,763	0/0:21,0:21:57.15:0,57,630	1/1:4,13:17:32.99:286,33,0	1/1:0,12:12:32.99:287,33,0	1/1:4,16:20:44.98:391,45,0	0/0:22,0:22:51.10:0,51,551	0/0:26,0:26:63.09:0,63,681	0/0:16,2:18:22.07:0,22,465	0/0:12,0:12:36.10:0,36,398
chr10	43825516	.	TCA	T	254.39	PASS	AB=0.986;AC=16;AF=0.364;AN=44;BaseQRankSum=3.649;DP=608;FS=3.335;HRun=0;HaplotypeScore=91.4161;InbreedingCoeff=0.4751;MQ=72.00;MQ0=8;MQRankSum=-1.980;QD=1.23;ReadPosRankSum=0.877;VQSLOD=1.7739;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:32,0:35:2.84:14,3,0	./.	./.	./.	1/1:9,0:11:1.25:3,1,0	./.	0/1:33,0:33:48.94:49,0,94	./.	1/1:10,6:17:6.02:64,6,0	0/0:26,0:26:24:0,24,261	0/0:12,0:12:0:0,0,0	0/0:14,0:14:2.56:0,3,39	0/0:15,0:15:15.05:0,15,207	0/1:20,0:20:49.45:49,0,112	1/1:20,0:20:14.73:67,15,0	1/1:26,0:26:13.55:61,14,0	0/0:24,0:24:21.02:0,21,243	0/0:32,0:31:43.46:0,43,463	0/0:8,0:8:3.01:0,3,42	0/0:11,0:11:5.99:0,6,65	0/0:30,0:30:39:0,39,430	1/1:16,0:16:3.01:32,3,0	./.	1/1:22,4:26:6.01:59,6,0	0/0:15,0:14:21.02:0,21,219	0/0:24,0:24:3.55:0,4,83	0/0:12,0:11:3:0,3,25	0/0:7,0:7:14.91:0,15,122
chr10	43825563	.	CACACAA	C	1349.51	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=2.156;DP=599;FS=11.255;HRun=0;HaplotypeScore=135.8734;InbreedingCoeff=0.9649;MQ=60.45;MQ0=22;MQRankSum=-2.163;QD=24.10;ReadPosRankSum=2.102;VQSLOD=2.9742;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:32:66.10:0,66,553	0/0:7,0:7:18.02:0,18,239	0/0:26,0:16:48.06:0,48,527	0/0:38,0:19:50.03:0,50,511	0/0:16,0:16:38.72:0,39,311	0/0:14,0:13:30.50:0,30,427	0/0:29,0:28:60.43:0,60,852	0/0:18,0:16:47.98:0,48,428	0/0:21,0:21:42.59:0,43,506	0/0:25,0:24:68.88:0,69,1134	0/0:10,0:10:12.01:0,12,109	0/0:28,0:28:74.53:0,75,1069	0/0:19,0:19:54.08:0,54,1014	0/0:20,0:20:54.01:0,54,830	1/1:19,4:24:44.65:731,45,0	1/1:26,6:32:54.06:740,54,0	0/0:28,0:28:77.68:0,78,1221	0/0:31,0:30:82.78:0,83,1506	0/0:21,0:20:59.73:0,60,558	0/0:12,0:12:21.52:0,22,425	0/0:34,0:33:84.04:0,84,1530	0/0:6,0:6:17.98:0,18,177	0/0:10,0:10:14.99:0,15,131	0/0:27,0:27:66:0,66,900	0/0:14,0:13:30.09:0,30,708	0/0:29,0:29:86.95:0,87,1178	0/0:17,0:16:44.69:0,45,558	0/0:9,0:9:24.05:0,24,472
chr10	43825615	.	CCACACCGA	C	4189.82	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=11.421;DP=684;FS=16.327;HRun=0;HaplotypeScore=177.2065;InbreedingCoeff=0.9986;MQ=89.77;MQ0=0;MQRankSum=-11.607;QD=66.51;ReadPosRankSum=3.573;VQSLOD=2.7245;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,135,5748	0/0:9,0:9:24.08:0,24,1061	0/0:29,0:29:83.64:0,84,3291	0/0:28,0:28:81.75:0,82,3330	0/0:24,0:24:72.23:0,72,2949	0/0:21,0:21:60.21:0,60,2595	0/0:35,0:35:99:0,102,4228	0/0:26,0:26:69.24:0,69,2813	0/0:24,0:24:72.23:0,72,3076	0/0:27,0:27:77.94:0,78,3252	0/0:13,0:13:39.13:0,39,1727	0/0:34,0:34:90.31:0,90,3727	0/0:23,0:23:69.24:0,69,3039	0/0:26,0:26:75.25:0,75,2984	1/1:2,26:28:66.23:1830,66,0	1/1:2,33:35:83.97:2360,84,0	0/0:29,0:29:84.27:0,84,3582	0/0:23,0:23:69.24:0,69,2972	0/0:23,0:22:60.21:0,60,2481	0/0:14,0:14:39.13:0,39,1724	0/0:32,0:32:86.43:0,86,3850	0/0:21,0:21:60.18:0,60,2537	0/0:23,0:23:66.21:0,66,2688	0/0:22,0:22:66.23:0,66,2916	0/0:18,0:18:51.17:0,51,2011	0/0:23,0:23:69.22:0,69,2948	0/0:16,0:16:48.16:0,48,2110	0/0:10,0:10:30.10:0,30,1272
chr10	43826134	.	CAG	C	2699.26	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=10.209;DP=795;FS=6.523;HRun=0;HaplotypeScore=92.9295;InbreedingCoeff=0.9998;MQ=82.55;MQ0=0;MQRankSum=-2.651;QD=39.12;ReadPosRankSum=3.255;VQSLOD=5.3265;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,144,2789	0/0:16,0:16:45.15:0,45,905	0/0:28,0:28:84.24:0,84,1511	0/0:16,0:16:42.07:0,42,655	0/0:30,0:30:90.31:0,90,1800	0/0:19,0:19:57.14:0,57,1014	0/0:25,0:25:75.23:0,75,1439	0/0:30,0:30:84.26:0,84,1604	0/0:23,0:23:69.24:0,69,1399	0/0:33,0:33:99:0,99,1845	0/0:15,0:15:45.13:0,45,842	0/0:29,0:29:87.30:0,87,1728	0/0:22,0:22:63.19:0,63,1196	0/0:29,0:29:87.30:0,87,1722	1/1:1,34:35:32.40:1404,32,0	1/1:0,34:34:87.30:1417,87,0	0/0:34,0:34:99:0,102,1995	0/0:33,0:33:99:0,99,1986	0/0:23,0:23:69.20:0,69,1270	0/0:15,0:15:45.14:0,45,878	0/0:70,0:70:99:0,211,4217	0/0:31,0:31:93.29:0,93,1816	0/0:34,0:34:99:0,99,1792	0/0:31,0:31:93.32:0,93,1852	0/0:29,0:29:87.28:0,87,1730	0/0:16,0:16:48.16:0,48,907	0/0:33,0:33:99:0,99,1928	0/0:14,0:14:42.14:0,42,852
chr10	43826496	.	GTCCGGCTGAGCACACA	G	2921.41	PASS	AB=0.611;AC=2;AF=0.036;AN=56;BaseQRankSum=9.700;DP=673;FS=1.398;HRun=0;HaplotypeScore=292.5498;InbreedingCoeff=-0.0373;MQ=80.00;MQ0=0;MQRankSum=-8.231;QD=59.62;ReadPosRankSum=2.451;VQSLOD=3.1162;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,129,8059	0/0:15,0:15:45.15:0,45,2727	0/0:22,0:23:66.63:0,67,2699	0/0:12,0:12:27.27:0,27,1474	0/0:17,0:17:51.16:0,51,3149	0/0:17,0:17:51.17:0,51,3813	0/0:25,0:25:75.25:0,75,4150	0/0:26,0:26:75.26:0,75,4156	0/0:22,0:22:66.23:0,66,4373	0/0:29,0:29:84.29:0,84,5212	0/0:9,0:9:21.07:0,21,1128	0/0:39,0:39:99:0,117,7718	0/0:26,0:26:78.25:0,78,5127	0/0:23,0:23:66.23:0,66,4377	0/1:8,11:19:74.33:869,0,74	0/1:9,21:30:39.76:2142,0,40	0/0:24,0:24:72.25:0,72,5069	0/0:22,0:21:63.21:0,63,4053	0/0:16,0:16:48.16:0,48,2601	0/0:13,0:13:36.12:0,36,1805	0/0:80,0:80:99:0,241,13992	0/0:15,0:15:45.13:0,45,2725	0/0:10,0:10:30.10:0,30,1667	0/0:48,0:48:99:0,144,9775	0/0:17,0:17:48.16:0,48,2401	0/0:25,0:25:75.26:0,75,4248	0/0:20,0:20:60.19:0,60,4048	0/0:7,0:7:21.07:0,21,1156
chr10	43827205	.	GAAA	G	959.67	PASS	AB=0.846;AC=11;AF=0.212;AN=52;BaseQRankSum=-2.229;DP=272;FS=1.625;HRun=15;HaplotypeScore=44.2695;InbreedingCoeff=0.6971;MQ=59.66;MQ0=23;MQRankSum=1.002;QD=12.63;ReadPosRankSum=4.567;VQSLOD=0.0323;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:14:17.97:0,18,187	0/0:2,0:6:11.63:0,12,91	0/0:10,0:5:15.01:0,15,169	0/0:12,0:9:6.56:0,7,190	0/0:5,0:7:17.97:0,18,214	0/1:8,1:9:15.65:16,0,166	0/0:10,0:13:28.25:0,28,397	0/0:8,0:11:20.99:0,21,247	0/0:7,0:8:18.06:0,18,328	0/0:3,0:7:18.02:0,18,242	0/0:2,0:3:6.02:0,6,80	1/1:1,8:11:22.54:264,23,0	1/1:3,12:16:9:266,9,0	1/1:3,10:12:18.01:196,18,0	./.	./.	0/0:2,0:18:29.39:0,29,211	0/0:7,0:15:30.10:0,30,449	0/0:7,0:7:21.05:0,21,299	0/0:6,0:7:9:0,9,117	0/0:7,0:6:11.95:0,12,147	1/1:2,3:4:2.92:34,3,0	0/0:2,3:4:0:0,0,0	1/1:7,13:18:22.76:344,23,0	0/0:7,0:8:12.02:0,12,149	0/0:6,0:6:11.91:0,12,105	0/0:4,0:6:12:0,12,158	0/0:6,0:5:6.02:0,6,85
chr10	43827351	.	GGT	G	772.71	PASS	AB=0.836;AC=23;AF=0.479;AN=48;BaseQRankSum=2.856;DP=529;FS=2.660;HRun=0;HaplotypeScore=84.7538;InbreedingCoeff=-0.0426;MQ=64.32;MQ0=7;MQRankSum=0.497;QD=2.33;ReadPosRankSum=-0.194;VQSLOD=1.7698;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:22,4:26:35.62:36,0,265	./.	./.	./.	0/1:16,2:18:17.81:18,0,163	0/0:14,0:14:12.04:0,12,172	0/1:26,4:29:50.22:50,0,242	1/1:27,0:27:6.01:65,6,0	0/0:22,0:22:24.06:0,24,327	0/1:14,3:17:35.88:45,0,36	./.	0/1:19,2:21:33.45:79,0,33	0/1:13,0:15:10.22:10,0,140	0/1:10,1:11:20.81:21,0,103	0/0:23,0:25:9:0,9,87	0/0:20,0:24:9:0,9,77	0/0:24,0:25:23.97:0,24,234	0/1:18,7:25:29.81:116,0,30	1/1:12,1:11:2.98:33,3,0	0/1:6,3:10:32.98:68,0,33	1/1:23,10:32:9.02:98,9,0	0/0:13,0:12:3.01:0,3,45	0/0:13,0:13:6.01:0,6,70	0/1:31,7:38:5.80:6,0,300	1/1:12,3:15:6.02:66,6,0	1/1:9,3:12:6.01:66,6,0	1/1:9,6:16:14.80:145,15,0	0/1:1,0:2:8.12:8,0,39
chr10	43827795	.	CAG	C	1461.89	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.808;DP=539;FS=12.298;HRun=0;HaplotypeScore=69.5971;InbreedingCoeff=0.9076;MQ=64.19;MQ0=0;MQRankSum=-2.565;QD=36.55;ReadPosRankSum=2.189;VQSLOD=5.4609;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:84.27:0,84,1509	0/0:8,0:8:24.08:0,24,437	0/0:15,0:12:36.11:0,36,611	0/0:13,0:12:29.95:0,30,457	0/0:15,0:15:36.12:0,36,646	0/0:20,0:20:51.17:0,51,934	0/0:35,0:35:96.33:0,96,1759	0/0:29,0:29:84.26:0,84,1432	0/0:18,0:18:45.15:0,45,824	0/0:16,0:16:39.13:0,39,683	0/0:6,0:6:15.05:0,15,274	0/0:20,0:20:51.16:0,51,904	0/0:11,0:11:30.10:0,30,550	0/0:21,0:21:57.18:0,57,996	1/1:2,22:24:63.21:902,63,0	1/1:0,16:16:48.16:681,48,0	0/0:31,0:31:90.31:0,90,1637	0/0:29,0:29:87.30:0,87,1576	0/0:17,0:16:42.14:0,42,770	0/0:12,0:12:33.10:0,33,574	0/0:50,0:50:99:0,132,2409	0/0:11,0:11:30.10:0,30,549	0/0:12,0:12:33.09:0,33,573	0/0:25,0:25:72.25:0,72,1319	0/0:18,0:18:51.16:0,51,904	0/0:16,0:16:45.14:0,45,794	0/0:19,0:19:51.17:0,51,925	0/0:1,0:1:3.01:0,3,55
chr10	43827855	.	G	GC	4278.52	PASS	AB=0.697;AC=32;AF=0.571;AN=56;BaseQRankSum=-6.832;DP=436;FS=1.692;HRun=10;HaplotypeScore=67.8580;InbreedingCoeff=0.5627;MQ=65.37;MQ0=0;MQRankSum=-1.437;QD=15.01;ReadPosRankSum=-1.087;VQSLOD=4.9602;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,7:16:14.25:135,14,0	0/1:4,5:9:9.61:113,0,10	0/1:10,1:10:2.01:26,0,2	0/0:10,0:7:2.91:0,3,33	0/1:6,7:13:0.78:193,0,1	0/1:10,11:21:9.59:113,0,10	1/1:7,24:31:54.14:576,54,0	0/0:29,2:33:26.75:0,27,395	1/1:2,12:14:24.06:256,24,0	1/1:3,11:14:27.03:275,27,0	0/1:4,4:8:34.14:81,0,34	0/0:3,0:23:36.66:0,37,108	0/0:1,0:11:15.81:0,16,46	0/0:0,0:14:24.44:0,24,72	1/1:15,0:15:31.93:175,32,0	1/1:12,0:12:24.68:156,25,0	1/1:12,14:26:13.77:513,14,0	1/1:4,10:14:7.80:271,8,0	0/1:8,6:14:25.23:164,0,25	1/1:2,6:8:17.98:178,18,0	1/1:8,15:23:21.05:224,21,0	0/0:2,0:7:6.11:0,6,18	0/0:2,0:19:28.52:0,29,84	0/0:2,0:17:28.51:0,29,84	0/0:17,0:17:17.92:0,18,144	1/1:0,11:11:27.07:288,27,0	1/1:3,16:19:42.11:448,42,0	1/1:0,4:4:9.02:96,9,0
chr10	43827865	.	C	CCAA	1661.97	PASS	AB=1.000;AC=8;AF=0.143;AN=56;BaseQRankSum=-3.726;DP=436;FS=22.225;HRun=0;HaplotypeScore=93.8376;InbreedingCoeff=0.3909;MQ=65.35;MQ0=0;MQRankSum=-3.890;QD=17.49;ReadPosRankSum=-5.030;VQSLOD=1.0411;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:15.08:0,15,257	0/0:13,0:13:19.41:0,19,168	0/1:10,0:8:8.10:8,0,178	0/0:13,0:9:6.53:0,7,116	0/0:16,0:16:27.24:0,27,205	0/0:14,0:14:19.41:0,19,169	0/0:27,0:27:53.82:0,54,292	0/0:30,0:30:71.56:0,72,970	0/0:13,0:13:19.99:0,20,75	0/1:13,0:13:24.69:25,0,146	0/0:12,0:12:25.85:0,26,282	0/0:21,0:21:57.08:0,57,551	0/0:10,0:10:24.04:0,24,234	0/0:16,0:16:39.06:0,39,386	1/1:6,13:20:57.13:1041,57,0	1/1:5,7:12:36.12:640,36,0	0/1:24,0:24:83.11:83,0,150	0/0:18,0:18:35.40:0,35,259	0/1:16,0:16:8.88:9,0,245	0/0:12,0:12:7.12:0,7,132	0/0:18,0:18:26.87:0,27,188	0/0:6,0:6:12.01:0,12,111	0/0:18,0:18:45.08:0,45,451	0/0:15,0:15:42.06:0,42,405	0/0:13,0:13:21.01:0,21,290	0/0:19,0:19:41.42:0,41,327	0/0:16,0:16:36.12:0,36,137	0/0:4,0:4:10.80:0,11,70
chr10	43829106	.	C	CT	1847.55	PASS	AB=0.938;AC=28;AF=0.519;AN=54;BaseQRankSum=5.102;DP=319;FS=24.714;HRun=0;HaplotypeScore=76.6808;InbreedingCoeff=0.3977;MQ=81.50;MQ0=0;MQRankSum=-4.460;QD=8.63;ReadPosRankSum=4.823;VQSLOD=1.8694;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:7,1:14:6.82:0,7,51	0/1:6,0:6:0.20:1,0,0	0/0:17,0:14:32.64:0,33,326	0/0:17,0:12:29.43:0,29,242	./.	0/0:7,0:7:20.78:0,21,156	0/0:21,0:21:47.56:0,48,347	0/0:6,0:6:11.96:0,12,115	0/0:7,0:7:20.67:0,21,134	0/1:10,0:10:9.64:110,0,10	0/1:4,0:4:15.36:35,0,15	1/1:18,0:18:19.88:173,20,0	0/1:9,2:11:15.78:94,0,16	0/1:8,0:8:1.23:99,0,1	0/0:6,0:6:3.36:0,3,58	0/0:8,0:8:8.03:0,8,92	0/1:16,0:17:36.15:63,0,36	1/1:18,0:18:2.68:164,3,0	1/1:16,0:16:31.43:165,31,0	1/1:9,0:9:17.83:128,18,0	1/1:18,4:22:37.24:263,37,0	0/1:12,0:12:8.63:104,0,9	1/1:6,2:8:9.93:75,10,0	1/1:14,3:17:15.22:146,15,0	0/1:6,4:10:9.47:45,0,9	1/1:12,0:12:28.08:188,28,0	1/1:15,0:15:23.71:165,24,0	1/1:1,0:1:2.80:13,3,0
chr10	43829107	.	C	CT	1662.18	PASS	AB=0.826;AC=29;AF=0.537;AN=54;BaseQRankSum=2.031;DP=306;FS=15.289;HRun=0;HaplotypeScore=69.6564;InbreedingCoeff=0.4243;MQ=80.40;MQ0=0;MQRankSum=-1.184;QD=7.77;ReadPosRankSum=3.727;VQSLOD=2.0371;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:13,0:13:13.87:14,0,41	0/0:6,0:6:6.07:0,6,28	0/0:15,0:13:29:0,29,294	0/0:14,0:11:16.71:0,17,176	./.	0/0:7,0:7:20.70:0,21,152	0/0:21,0:21:44.47:0,44,313	0/0:5,0:5:14.96:0,15,142	0/0:8,0:8:20.40:0,20,121	0/1:7,3:10:18.12:40,0,18	0/0:3,1:4:2.13:0,2,5	1/1:10,8:18:28.92:217,29,0	0/1:6,5:11:2.47:134,0,2	1/1:2,6:8:15.60:91,16,0	0/1:5,0:5:0.26:0,0,36	0/0:7,0:7:5.04:0,5,68	0/1:18,2:20:5:5,0,117	1/1:4,13:17:2.08:196,2,0	1/1:6,7:13:2.49:98,2,0	1/1:3,6:9:9.52:113,10,0	1/1:7,12:19:18.57:202,19,0	0/1:5,5:10:11.47:73,0,11	1/1:4,4:8:6.59:55,7,0	1/1:6,10:16:20.41:172,20,0	0/1:6,3:9:3.99:25,0,4	1/1:4,8:12:30.68:195,31,0	1/1:4,11:15:32.53:195,33,0	1/1:0,1:1:2.94:18,3,0
chr10	43829108	.	C	CG	3837.30	PASS	AB=0.967;AC=40;AF=0.714;AN=56;BaseQRankSum=2.793;DP=315;FS=9.697;HRun=0;HaplotypeScore=66.2445;InbreedingCoeff=0.7265;MQ=76.26;MQ0=0;MQRankSum=-3.828;QD=16.33;ReadPosRankSum=2.015;VQSLOD=5.6557;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:13,0:14:12.50:61,0,12	1/1:1,0:7:5.59:29,6,0	0/0:14,0:11:29.41:0,29,314	0/0:15,0:10:13.14:0,13,140	1/1:3,0:3:3:25,3,0	0/0:9,0:9:17.69:0,18,126	0/0:21,0:21:40.95:0,41,266	0/0:5,0:5:14.99:0,15,144	0/0:8,0:8:17.59:0,18,105	1/1:2,3:12:28.96:211,29,0	1/1:2,1:3:5.97:46,6,0	1/1:10,8:18:35.70:404,36,0	1/1:4,5:9:11.40:191,11,0	1/1:1,6:7:20.83:158,21,0	0/1:8,0:8:0.26:0,0,36	0/0:8,0:8:4.02:0,4,55	1/1:3,2:23:32.79:184,33,0	1/1:0,13:17:41.60:359,42,0	1/1:6,7:13:35.80:297,36,0	1/1:3,6:9:12.67:181,13,0	1/1:8,12:20:36.30:418,36,0	1/1:5,5:10:7.22:150,7,0	1/1:6,4:11:14.48:123,14,0	1/1:5,10:15:32.58:292,33,0	1/1:6,3:9:17.74:128,18,0	1/1:4,8:12:22.95:271,23,0	1/1:3,11:14:34.47:282,34,0	1/1:0,1:1:3:25,3,0
chr10	43830164	.	TGC	T	1224.47	PASS	AB=0.997;AC=21;AF=0.404;AN=52;BaseQRankSum=-1.761;DP=434;FS=0.616;HRun=0;HaplotypeScore=92.8815;InbreedingCoeff=0.0941;MQ=72.84;MQ0=1;MQRankSum=-1.429;QD=4.33;ReadPosRankSum=-0.531;VQSLOD=2.6269;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:35,0:35:48.48:90,0,48	./.	./.	0/0:19,0:14:10.05:0,10,68	0/1:12,0:12:11.35:11,0,62	0/0:14,0:14:17.72:0,18,382	0/0:27,0:27:38.58:0,39,709	1/1:7,11:18:26.97:233,27,0	0/0:12,0:12:24:0,24,330	1/1:15,0:15:8.67:198,9,0	0/0:5,0:5:0.33:0,0,1	0/0:21,0:21:23.50:0,24,154	0/0:4,0:4:5.97:0,6,52	0/0:12,0:12:17.69:0,18,155	1/1:14,0:14:14.20:70,14,0	1/1:15,0:15:11.75:57,12,0	1/1:28,0:28:30.77:272,31,0	0/1:27,1:28:28.51:95,0,29	0/1:11,0:10:5.81:112,0,6	0/1:7,0:7:16.95:17,0,23	0/1:45,0:45:77.67:123,0,78	0/1:7,0:7:7.91:8,0,84	0/0:5,0:5:0:0,0,0	0/0:21,0:21:17.37:0,17,126	0/1:11,0:11:10:10,0,103	0/1:11,0:10:34.74:35,0,46	0/1:12,0:12:9.78:36,0,10	0/1:14,0:14:24.02:24,0,62
chr10	43830172	.	CGCGCGCGTGT	C	1378.85	PASS	AB=1.000;AC=5;AF=0.096;AN=52;BaseQRankSum=2.126;DP=418;FS=8.202;HRun=0;HaplotypeScore=141.3611;InbreedingCoeff=0.5982;MQ=62.83;MQ0=2;MQRankSum=-5.962;QD=25.53;ReadPosRankSum=0.736;VQSLOD=2.7734;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:62.78:0,63,1482	./.	./.	0/0:15,0:9:12.56:0,13,210	0/0:9,0:9:14.94:0,15,535	0/0:16,0:16:39.13:0,39,1767	0/0:29,0:29:81.23:0,81,2911	0/0:16,0:16:34.16:0,34,609	0/0:9,0:9:27.08:0,27,1130	0/0:15,0:15:40.77:0,41,869	0/0:3,0:3:2.61:0,3,116	0/0:17,0:17:29.82:0,30,622	0/0:3,0:3:5.90:0,6,264	0/0:11,0:11:20.72:0,21,606	1/1:0,13:13:21.07:636,21,0	1/1:1,12:14:24:650,24,0	0/1:27,0:27:99:218,0,415	0/0:30,0:31:70.72:0,71,2160	0/0:15,0:14:8.23:0,8,654	0/0:8,0:8:17.88:0,18,523	0/0:50,0:50:99:0,102,2782	0/0:8,0:8:21.06:0,21,448	0/0:4,0:4:2.81:0,3,24	0/0:22,0:22:23.67:0,24,531	0/0:12,0:12:20.96:0,21,813	0/0:10,0:8:25.69:0,26,749	0/0:11,0:11:24.05:0,24,766	0/0:10,0:10:30.08:0,30,1148
chr10	43830176	.	C	CGT	2761	PASS	AB=0.725;AC=20;AF=0.370;AN=54;BaseQRankSum=3.472;DP=412;FS=1.252;HRun=0;HaplotypeScore=88.6897;InbreedingCoeff=0.2241;MQ=64.16;MQ0=2;MQRankSum=2.606;QD=11.36;ReadPosRankSum=3.274;VQSLOD=3.5957;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:13,17:31:18.17:282,0,18	./.	0/0:4,0:2:2.99:0,3,23	0/0:17,0:10:8.26:0,8,73	0/1:3,6:9:2.12:116,0,2	0/0:17,0:17:41.86:0,42,536	0/0:28,0:28:75.09:0,75,995	0/0:15,0:16:15.36:0,15,80	0/0:8,0:8:24.08:0,24,354	1/1:7,8:15:19.97:239,20,0	1/1:0,3:3:3:46,3,0	0/0:15,0:15:11.51:0,12,221	0/1:4,0:4:5.13:5,0,36	0/0:10,0:10:14.59:0,15,188	0/0:13,0:13:19.89:0,20,98	0/0:14,0:14:22.73:0,23,111	1/1:24,0:24:17:132,17,0	0/1:10,20:30:25.02:570,0,25	0/1:9,5:13:10.42:93,0,10	1/1:2,4:7:11.86:165,12,0	0/1:22,28:51:88.22:575,0,88	0/1:7,0:7:1.54:2,0,97	0/0:2,0:2:0:0,0,0	0/0:21,0:21:17.76:0,18,228	0/1:3,1:13:23.40:99,0,23	0/1:6,7:11:11.50:174,0,12	1/1:4,7:11:17.75:266,18,0	0/1:8,2:10:5.90:166,0,6
chr10	43830178	.	C	CGTGTGTGTGTGT	1309.66	PASS	AB=0.986;AC=18;AF=0.333;AN=54;BaseQRankSum=-2.964;DP=416;FS=11.434;HRun=0;HaplotypeScore=166.2721;InbreedingCoeff=0.2473;MQ=59.65;MQ0=2;MQRankSum=-3.014;QD=7.53;ReadPosRankSum=-3.507;VQSLOD=1.0921;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:28:14.13:14,0,337	./.	0/0:4,0:2:3.01:0,3,41	0/0:14,0:7:3.01:0,3,38	0/1:9,0:9:12.94:13,0,94	0/0:14,0:17:33.11:0,33,1042	0/0:26,0:28:48.08:0,48,1354	0/0:20,0:20:17.12:0,17,230	0/0:8,0:8:15.05:0,15,519	0/0:14,0:14:14.83:0,15,145	0/0:4,0:4:3.22:0,3,30	1/1:16,3:19:1.79:94,2,0	1/1:3,0:5:6.02:157,6,0	1/1:5,3:9:3.01:176,3,0	0/0:13,0:13:20.14:0,20,409	0/0:14,0:14:22.02:0,22,370	1/1:25,0:25:15.94:504,16,0	0/0:31,0:31:43.27:0,43,634	0/1:15,0:14:35.65:110,0,36	0/0:8,0:8:12.03:0,12,133	0/0:49,0:48:19.56:0,20,867	1/1:3,3:7:3.01:176,3,0	0/0:0,1:2:0:0,0,0	1/1:17,4:23:0.47:1,0,0	0/1:12,0:12:13.75:58,0,14	0/1:10,0:10:87.44:87,0,194	0/0:10,0:11:18.04:0,18,196	0/1:11,0:11:73.08:73,0,73
chr10	43830202	.	T	TGTGTGTGCGC	1426.38	PASS	AB=0.990;AC=10;AF=0.185;AN=54;BaseQRankSum=3.000;DP=422;FS=0.000;HRun=0;HaplotypeScore=161.4647;InbreedingCoeff=-0.0042;MQ=62.84;MQ0=3;MQRankSum=-5.601;QD=13.33;ReadPosRankSum=-1.104;VQSLOD=2.4869;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:70.29:0,70,1015	./.	0/0:12,0:8:23.79:0,24,351	0/0:15,0:10:23.79:0,24,313	0/1:8,0:8:3.90:4,0,223	0/0:18,0:18:48.12:0,48,1250	0/0:20,0:20:47.89:0,48,1490	0/0:19,0:19:47.33:0,47,795	0/0:9,0:9:27.09:0,27,685	0/0:9,0:9:23.80:0,24,295	0/0:5,0:5:6.49:0,6,85	0/1:18,0:18:77.90:78,0,196	0/1:5,0:5:41.34:112,0,41	0/1:7,0:7:85.02:85,0,130	0/0:14,0:14:23.98:0,24,540	0/0:17,0:17:36.11:0,36,713	1/1:10,9:24:20.53:1044,21,0	0/0:28,0:28:19.44:0,19,830	0/1:15,0:15:81.86:82,0,370	0/0:11,0:11:27.03:0,27,350	0/0:53,0:52:99:0,107,1695	0/1:7,0:7:82.97:83,0,129	0/0:5,0:5:5.99:0,6,70	0/0:15,0:15:3.35:0,3,47	0/1:11,0:11:39.03:42,0,39	0/0:20,0:19:49.62:0,50,680	0/0:10,0:10:23.56:0,24,276	0/1:11,0:12:41.38:41,0,257
chr10	43830302	.	TTTTA	T	1676.51	PASS	AC=22;AF=0.550;AN=40;BaseQRankSum=1.131;DP=239;FS=4.981;HRun=0;HaplotypeScore=41.5090;InbreedingCoeff=0.6217;MQ=71.82;MQ0=1;MQRankSum=3.100;QD=14.45;ReadPosRankSum=2.959;VQSLOD=2.1998;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,7:13:18.06:282,18,0	0/0:2,0:2:2.99:0,3,24	./.	0/0:8,0:8:3.01:0,3,40	1/1:3,2:5:6.02:94,6,0	0/0:2,0:10:15.05:0,15,262	0/0:5,0:5:3.01:0,3,71	0/0:28,0:28:21.05:0,21,281	./.	1/1:7,2:9:6.01:74,6,0	1/1:6,2:8:6.02:94,6,0	0/0:2,0:9:6.02:0,6,86	./.	./.	0/0:1,0:1:3.01:0,3,54	0/0:6,0:6:3.01:0,3,37	0/0:16,0:19:22.31:0,22,328	1/1:10,6:16:24.06:345,24,0	1/1:8,2:10:3.01:47,3,0	1/1:6,2:8:6.02:94,6,0	./.	./.	./.	./.	1/1:3,9:12:24.08:374,24,0	1/1:3,0:3:3.01:47,3,0	1/1:7,3:10:3.01:47,3,0	1/1:13,9:22:21.07:328,21,0
chr10	43830772	.	TG	T	22452.42	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=7.336;DP=721;FS=5.361;HRun=2;HaplotypeScore=78.8410;InbreedingCoeff=0.9993;MQ=77.85;MQ0=0;MQRankSum=-5.544;QD=36.63;ReadPosRankSum=3.307;VQSLOD=5.5834;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,51:53:99:1830,141,0	1/1:0,9:9:27.09:350,27,0	0/0:15,0:15:42.07:0,42,579	0/0:15,0:15:38.92:0,39,512	1/1:1,17:18:51.17:660,51,0	0/0:21,0:21:63.21:0,63,944	0/0:32,0:31:96.33:0,96,1438	1/1:2,24:25:72.22:921,72,0	0/0:25,0:25:75.25:0,75,1124	1/1:1,23:24:66.21:856,66,0	1/1:1,18:19:54.18:701,54,0	1/1:0,43:43:99:1636,126,0	1/1:0,24:24:68.90:894,69,0	1/1:1,27:28:78.25:1013,78,0	1/1:0,33:33:99:1286,99,0	1/1:0,28:28:81.26:1052,81,0	1/1:0,31:31:93.30:1207,93,0	1/1:1,19:20:51.16:660,51,0	1/1:0,32:32:96.31:1243,96,0	1/1:0,14:14:42.14:545,42,0	1/1:1,73:74:99:2571,199,0	1/1:0,16:16:45.15:584,45,0	1/1:0,9:9:27.09:351,27,0	1/1:1,33:34:93.30:1208,93,0	1/1:0,19:19:57.19:740,57,0	1/1:1,27:28:81.22:1015,81,0	1/1:0,22:22:60.19:779,60,0	1/1:0,9:9:27.09:350,27,0
chr10	43831766	.	AT	A	1723.07	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.592;DP=615;FS=1.647;HRun=7;HaplotypeScore=59.6529;InbreedingCoeff=0.9978;MQ=64.98;MQ0=1;MQRankSum=0.495;QD=22.38;ReadPosRankSum=-0.871;VQSLOD=3.0417;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:84.25:0,84,1041	0/0:11,0:11:33.11:0,33,415	0/0:17,0:11:23.64:0,24,253	0/0:13,0:11:23.58:0,24,248	0/0:25,0:25:75.23:0,75,927	0/0:16,0:16:42.13:0,42,528	0/0:16,0:16:48.11:0,48,586	1/1:5,24:29:72.16:733,72,0	0/0:20,0:20:57.18:0,57,716	0/0:15,0:15:45.09:0,45,537	0/0:23,0:23:66.21:0,66,830	0/0:18,0:18:51.16:0,51,642	0/0:17,0:17:45.14:0,45,557	0/0:13,0:13:36.12:0,36,453	1/1:1,17:18:39.09:398,39,0	1/1:0,30:30:72.16:735,72,0	0/0:27,0:27:81.26:0,81,1019	0/0:22,0:22:66.21:0,66,830	0/0:27,0:27:75.23:0,75,930	0/0:31,0:31:93.24:0,93,1151	0/0:12,0:12:30.10:0,30,377	0/0:10,0:10:30.10:0,30,374	0/0:17,0:17:42.13:0,42,526	0/0:17,0:17:51.16:0,51,642	0/0:37,0:37:99:0,105,1320	0/0:39,0:39:99:0,105,1298	0/0:45,0:45:99:0,129,1615	0/0:20,0:20:54.17:0,54,678
chr10	43832326	.	G	GT	718.98	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-4.042;DP=555;FS=2.751;HRun=7;HaplotypeScore=53.6086;InbreedingCoeff=0.9685;MQ=79.53;MQ0=0;MQRankSum=-1.749;QD=25.68;ReadPosRankSum=1.353;VQSLOD=4.2694;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:54.08:0,54,521	1/1:1,4:5:9.03:109,9,0	0/0:17,0:17:40.61:0,41,376	0/0:19,0:19:28.06:0,28,320	0/0:33,0:33:96.15:0,96,926	0/0:27,0:27:75.10:0,75,718	0/0:15,0:15:42.05:0,42,399	0/0:42,0:42:99:0,105,999	0/0:18,0:18:48.07:0,48,463	0/0:21,0:21:54.03:0,54,507	0/0:23,0:23:60.04:0,60,569	0/0:16,0:16:48.08:0,48,463	0/0:18,0:18:48.08:0,48,463	0/0:13,0:13:33.05:0,33,318	0/0:19,0:19:51.08:0,51,492	0/0:28,0:28:72.07:0,72,682	1/1:2,21:23:60.18:725,60,0	0/0:15,0:15:36.06:0,36,347	0/0:20,0:20:51.08:0,51,492	0/0:18,0:18:48.07:0,48,464	0/0:20,0:20:57.08:0,57,544	0/0:17,0:17:48.06:0,48,459	0/0:14,0:14:36.05:0,36,347	0/0:19,0:19:45.07:0,45,435	0/0:17,0:17:42.07:0,42,405	0/0:24,0:24:63.10:0,63,608	0/0:21,0:21:54.07:0,54,515	0/0:13,0:13:39.06:0,39,376
chr10	43832476	.	A	ATTTTCC	20192.94	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-8.354;DP=472;FS=6.432;HRun=0;HaplotypeScore=77.8689;InbreedingCoeff=0.8890;MQ=65.85;MQ0=0;MQRankSum=-10.664;QD=53.28;ReadPosRankSum=0.081;VQSLOD=4.4205;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:10,6:17:23.38:774,23,0	1/1:1,1:3:3.01:101,3,0	0/0:20,0:19:39.06:0,39,754	0/0:13,0:13:21.06:0,21,383	1/1:3,12:14:14.98:400,15,0	0/0:25,0:25:69.16:0,69,1337	0/0:17,0:17:48.16:0,48,994	1/1:18,19:37:75.24:1862,75,0	0/0:18,0:18:45.15:0,45,969	1/1:3,6:10:24.07:662,24,0	1/1:4,11:15:24.08:791,24,0	1/1:6,11:20:33.11:1083,33,0	1/1:2,22:24:54.19:1802,54,0	1/1:2,8:10:15.05:503,15,0	1/1:3,16:19:36.12:1186,36,0	1/1:6,24:32:63.22:2113,63,0	1/1:3,8:10:15.05:475,15,0	1/1:6,6:12:14.08:409,14,0	1/1:8,16:24:63.22:2034,63,0	1/1:9,7:17:24.08:773,24,0	1/1:5,7:14:9.03:238,9,0	1/1:3,6:9:14.97:342,15,0	1/1:3,9:13:15.05:501,15,0	1/1:4,9:12:21.07:592,21,0	1/1:4,5:11:6.02:201,6,0	1/1:6,14:21:42.14:1147,42,0	1/1:3,23:26:60.21:2013,60,0	1/1:6,0:6:9.03:192,9,0
chr10	43832488	.	C	CT	1583.70	PASS	AB=0.982;AC=24;AF=0.429;AN=56;BaseQRankSum=13.478;DP=460;FS=9.527;HRun=3;HaplotypeScore=96.1321;InbreedingCoeff=-0.5791;MQ=66.82;MQ0=0;MQRankSum=-11.650;QD=4.37;ReadPosRankSum=7.530;VQSLOD=-0.5337;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:15,0:15:14:14,0,154	1/1:2,0:2:2.60:10,3,0	0/0:22,0:21:54.02:0,54,626	0/0:16,0:16:36.08:0,36,397	0/1:13,0:12:18.95:74,0,19	0/0:28,0:28:78.19:0,78,899	0/0:16,0:16:48.15:0,48,576	0/1:38,0:38:99:213,0,598	0/0:16,0:16:45.14:0,45,540	0/1:8,0:8:33.28:33,0,51	0/1:14,0:14:33.91:75,0,34	0/1:22,0:22:54.43:54,0,162	0/1:26,0:26:47.39:110,0,47	0/1:10,0:10:19.61:36,0,20	0/1:21,0:21:70.83:71,0,136	0/1:31,0:31:81.40:137,0,81	0/1:11,0:10:14.54:15,0,91	0/1:10,0:10:14.63:15,0,79	0/1:25,0:25:99:211,0,186	0/1:14,0:14:45.53:46,0,144	0/1:12,0:12:48.18:48,0,57	0/1:8,0:8:20.13:38,0,20	0/1:10,0:10:1.64:36,0,2	0/1:12,0:11:55.09:55,0,85	0/1:9,0:9:12.69:13,0,28	0/1:18,0:18:61.28:188,0,61	0/1:27,0:27:81.33:144,0,81	0/1:2,4:6:9.79:106,0,10
chr10	43832764	.	G	GA	550.80	PASS	AB=0.872;AC=36;AF=0.643;AN=56;BaseQRankSum=3.156;DP=298;FS=8.281;HRun=0;HaplotypeScore=55.9082;InbreedingCoeff=0.1302;MQ=50.54;MQ0=12;MQRankSum=-1.135;QD=2.45;ReadPosRankSum=0.160;VQSLOD=1.0178;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:13,1:14:4.65:36,5,0	1/1:8,1:9:0.60:28,1,0	0/1:10,0:3:5.11:5,0,19	0/1:13,0:4:0.36:4,0,0	1/1:7,2:9:0.50:20,1,0	0/0:14,0:14:39.02:0,39,454	0/0:21,0:20:42.13:0,42,531	1/1:13,0:10:3.04:11,3,0	0/0:13,0:13:21.01:0,21,227	1/1:7,0:8:3.55:15,4,0	0/0:7,0:6:0.75:0,1,2	0/1:6,3:9:8.88:41,0,9	1/1:10,2:10:1.05:22,1,0	0/1:5,2:7:9.36:20,0,9	1/1:9,3:11:5.98:74,6,0	0/1:10,2:11:24.65:62,0,25	0/0:9,0:8:4.38:0,4,33	1/1:7,0:9:9.86:45,10,0	1/1:6,1:7:4.05:28,4,0	0/1:7,1:10:3.77:46,0,4	1/1:1,2:6:2.79:13,3,0	1/1:9,2:11:9.25:72,9,0	0/0:9,0:8:1.11:0,1,3	1/1:6,3:9:4.03:45,4,0	0/1:8,1:8:22.26:22,0,23	1/1:13,0:12:5.88:31,6,0	0/1:11,1:11:8.34:34,0,8	1/1:4,1:4:2.90:26,3,0
chr10	43832776	.	A	AAAAAAGAAAG	7548.14	PASS	AB=0.933;AC=45;AF=0.804;AN=56;BaseQRankSum=5.757;DP=359;FS=2.521;HRun=0;HaplotypeScore=144.6955;InbreedingCoeff=0.3635;MQ=40.58;MQ0=30;MQRankSum=-4.381;QD=25.16;ReadPosRankSum=0.099;VQSLOD=4.5299;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:19:36.32:675,36,0	1/1:2,0:7:6.02:158,6,0	0/1:19,0:3:2.64:3,0,23	0/0:21,0:4:4.36:0,4,83	1/1:11,0:10:8.13:151,8,0	0/1:10,0:10:3.31:3,0,210	0/0:21,0:21:26.71:0,27,538	0/1:22,0:19:65.21:65,0,96	0/0:17,0:17:6.72:0,7,403	1/1:11,0:9:17.25:452,17,0	1/1:4,0:3:5.97:117,6,0	1/1:10,0:9:8.59:85,9,0	1/1:9,0:7:5.82:104,6,0	1/1:10,0:8:12.83:237,13,0	1/1:14,0:12:27.48:593,27,0	1/1:19,0:18:41.22:808,41,0	0/1:12,0:11:4.38:182,0,4	1/1:8,0:8:20.99:274,21,0	1/1:16,0:12:29.26:459,29,0	1/1:10,1:11:26.96:418,27,0	1/1:9,0:6:5.97:96,6,0	1/1:14,0:12:27.09:785,27,0	1/1:10,0:10:17.95:311,18,0	1/1:12,0:10:5.51:67,6,0	0/1:6,6:10:4.85:285,0,5	1/1:12,0:12:21.03:703,21,0	1/1:12,0:11:4.46:444,4,0	1/1:3,0:2:3.01:73,3,0
chr10	43832784	.	GAC	G	144.32	PASS	AB=0.737;AC=7;AF=0.152;AN=46;BaseQRankSum=-1.104;DP=391;FS=8.547;HRun=0;HaplotypeScore=75.0510;InbreedingCoeff=0.2727;MQ=40.73;MQ0=30;MQRankSum=3.022;QD=2.67;ReadPosRankSum=0.869;VQSLOD=0.7529;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:23:3:0,3,27	0/0:7,0:6:5.24:0,5,21	0/0:23,0:4:3.01:0,3,45	0/0:22,0:5:3.01:0,3,34	./.	1/1:4,8:11:6.02:67,6,0	1/1:7,7:14:12.02:125,12,0	0/0:27,0:24:26.59:0,27,190	0/1:9,5:14:36.63:58,0,37	0/0:10,0:8:8.94:0,9,69	0/0:7,0:5:3:0,3,26	0/0:11,0:10:3:0,3,25	0/0:8,0:8:5.94:0,6,42	./.	0/0:11,0:10:9:0,9,93	0/0:10,0:20:15:0,15,133	0/0:12,0:12:6.46:0,6,50	0/0:7,0:6:2.97:0,3,20	0/0:17,0:13:20.78:0,21,146	0/0:16,0:16:2.99:0,3,24	./.	0/0:17,0:16:3.47:0,3,26	0/0:9,0:11:2.96:0,3,19	1/1:14,0:13:1.25:3,1,0	./.	0/0:17,0:16:38.14:0,38,245	0/0:9,0:12:3:0,3,26	./.
chr10	43833246	.	AT	A	1255.33	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-3.591;DP=683;FS=3.180;HRun=1;HaplotypeScore=98.6018;InbreedingCoeff=0.9835;MQ=76.81;MQ0=0;MQRankSum=0.382;QD=38.04;ReadPosRankSum=-4.189;VQSLOD=2.3347;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:96.31:0,96,1511	0/0:5,0:5:15.05:0,15,237	0/0:21,0:21:57.18:0,57,888	0/0:23,0:23:69.21:0,69,1067	0/0:28,0:28:84.27:0,84,1319	0/0:29,0:29:87.30:0,87,1390	0/0:22,0:22:66.23:0,66,1052	1/1:0,33:33:99:1350,99,0	0/0:32,0:32:96.33:0,96,1522	0/0:31,0:31:93.31:0,93,1465	0/0:16,0:16:48.16:0,48,765	0/0:27,0:27:81.28:0,81,1292	0/0:10,0:10:27.09:0,27,432	0/0:17,0:17:51.17:0,51,810	0/0:37,0:37:99:0,111,1768	0/0:29,0:29:87.30:0,87,1384	0/0:24,0:24:72.22:0,72,1125	0/0:22,0:22:63.21:0,63,996	0/0:21,0:21:63.20:0,63,986	0/0:17,0:17:51.17:0,51,815	0/0:37,0:37:99:0,108,1727	0/0:23,0:23:66.20:0,66,1028	0/0:21,0:21:63.20:0,63,980	0/0:25,0:25:72.25:0,72,1151	0/0:22,0:22:66.22:0,66,1043	0/0:28,0:28:81.28:0,81,1295	0/0:29,0:29:87.27:0,87,1356	0/0:21,0:21:63.21:0,63,1007
chr10	43834043	.	AAAACAAAC	A	10533.77	PASS	AB=0.663;AC=41;AF=0.759;AN=54;BaseQRankSum=10.070;DP=465;FS=37.726;HRun=0;HaplotypeScore=125.9182;InbreedingCoeff=0.6226;MQ=46.34;MQ0=6;MQRankSum=-8.988;QD=29.42;ReadPosRankSum=3.052;VQSLOD=2.6177;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:8,13:21:23.78:604,0,24	1/1:4,6:10:12.04:289,12,0	0/0:15,0:8:18.06:0,18,664	0/0:18,0:15:30.10:0,30,1211	1/1:6,13:18:32.93:534,33,0	0/0:30,0:30:66.23:0,66,2620	0/0:19,0:19:39.13:0,39,1506	1/1:15,6:18:17.98:238,18,0	0/0:22,0:22:51.14:0,51,1892	0/1:6,6:11:14.91:431,0,15	1/1:6,2:8:5.98:97,6,0	1/1:5,18:23:48.16:1231,48,0	1/1:4,14:18:36.12:917,36,0	1/1:5,8:13:18.06:462,18,0	1/1:9,6:15:18.06:462,18,0	1/1:13,14:27:36.12:923,36,0	1/1:13,11:24:21.07:539,21,0	1/1:9,7:16:12.04:267,12,0	0/1:7,5:12:11.46:329,0,11	1/1:10,6:16:9.03:191,9,0	1/1:7,7:14:6.02:154,6,0	1/1:4,15:19:35.98:751,36,0	1/1:2,6:8:12:251,12,0	1/1:9,17:26:24:615,24,0	1/1:2,6:8:8.99:174,9,0	1/1:4,12:16:33.11:846,33,0	1/1:6,6:12:9.03:231,9,0	./.
chr10	43834245	.	CT	C	12715.89	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=10.131;DP=444;FS=25.126;HRun=1;HaplotypeScore=83.0283;InbreedingCoeff=0.9415;MQ=84.87;MQ0=0;MQRankSum=-7.261;QD=36.33;ReadPosRankSum=4.681;VQSLOD=3.0163;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,25:25:63.21:867,63,0	1/1:0,8:8:24.08:334,24,0	0/0:21,0:20:50.80:0,51,728	0/0:17,0:17:45.14:0,45,681	1/1:0,6:6:9.03:114,9,0	0/0:23,0:23:58.17:0,58,960	0/0:26,0:26:75.26:0,75,1190	1/1:0,23:22:66.13:825,66,0	0/0:7,0:7:21.07:0,21,335	1/1:0,15:15:41.97:555,42,0	1/1:0,4:4:8.99:103,9,0	1/1:0,22:22:60.20:831,60,0	1/1:0,13:13:39.12:530,39,0	1/1:0,18:18:48.16:665,48,0	1/1:0,25:25:75.25:1048,75,0	1/1:0,12:12:36.12:497,36,0	1/1:0,31:31:81.27:1129,81,0	1/1:0,18:18:45.15:627,45,0	1/1:0,19:19:57.17:765,57,0	1/1:0,14:14:35.48:466,35,0	1/1:0,19:19:51.17:713,51,0	1/1:0,5:5:12.04:158,12,0	1/1:0,15:14:27.09:364,27,0	1/1:0,12:12:33.11:456,33,0	1/1:0,13:13:30.10:416,30,0	1/1:0,14:14:39.13:541,39,0	1/1:0,16:16:45.06:628,45,0	1/1:0,3:3:6.02:84,6,0
chr10	43834538	.	TCA	T	1105.28	PASS	AB=0.939;AC=18;AF=0.321;AN=56;BaseQRankSum=1.290;DP=631;FS=28.093;HRun=0;HaplotypeScore=199.9691;InbreedingCoeff=-0.2923;MQ=61.73;MQ0=2;MQRankSum=-1.778;QD=2.70;ReadPosRankSum=2.726;VQSLOD=0.9158;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:35,5:40:43.24:172,0,43	0/0:9,0:9:13.86:0,14,126	0/1:37,1:27:19.68:20,0,134	0/0:36,0:25:16.62:0,17,218	1/1:3,1:4:3.01:30,3,0	0/1:10,1:11:8.50:8,0,307	0/1:30,2:31:34.28:34,0,901	0/1:34,5:37:99:292,0,203	0/0:29,1:30:18.72:0,19,1052	0/1:20,1:21:39.73:40,0,135	0/0:6,0:6:4.98:0,5,25	0/0:27,0:24:3.16:0,3,94	0/1:19,0:18:3.19:3,0,99	0/0:25,0:24:7.71:0,8,57	0/1:30,0:29:7:10,0,7	0/1:33,0:31:0.02:0,0,47	0/1:16,0:16:10.96:11,0,80	0/1:18,0:18:0.03:89,0,0	0/0:16,0:16:9.84:0,10,108	0/0:12,0:12:19.71:0,20,125	0/1:37,2:39:36.51:170,0,37	0/0:12,0:12:3:0,3,25	0/0:17,0:16:7.56:0,8,29	0/0:31,0:30:5.98:0,6,46	0/1:14,1:15:30.16:38,0,30	0/1:16,3:19:79.82:150,0,80	0/1:25,1:26:62.24:62,0,113	0/1:6,3:9:22.93:124,0,23
chr10	43834548	.	A	ACACG	1848.85	PASS	AB=0.930;AC=17;AF=0.304;AN=56;BaseQRankSum=4.613;DP=682;FS=1.415;HRun=0;HaplotypeScore=260.6557;InbreedingCoeff=0.6413;MQ=47.90;MQ0=5;MQRankSum=-4.534;QD=7.58;ReadPosRankSum=-1.742;VQSLOD=2.3870;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:45.49:0,45,356	0/1:6,1:7:23.13:180,0,23	0/0:34,0:20:36.48:0,36,451	0/0:35,0:18:22.58:0,23,420	0/0:3,0:3:2.74:0,3,12	0/0:16,0:16:39.01:0,39,516	0/0:41,0:40:99:0,100,1482	0/0:42,0:40:26.75:0,27,470	0/0:35,0:35:67.89:0,68,1493	0/0:23,0:22:50.04:0,50,315	0/0:7,0:7:7.74:0,8,54	0/1:29,3:29:9.34:195,0,9	1/1:22,0:21:8.33:243,8,0	1/1:20,1:20:29.50:336,29,0	1/1:35,0:33:4.67:219,5,0	0/1:48,0:46:29.97:263,0,30	1/1:15,2:16:27.52:332,28,0	0/0:14,0:14:20.74:0,21,121	0/0:20,0:20:25.92:0,26,265	0/0:13,0:13:24.69:0,25,209	0/0:41,0:42:23.38:0,23,203	1/1:13,1:14:7.10:52,7,0	1/1:15,1:15:5.89:100,6,0	1/1:29,2:31:11.56:115,12,0	0/0:16,0:16:22:0,22,166	0/0:20,0:20:40.58:0,41,342	0/0:25,0:25:38.33:0,38,375	0/0:9,0:9:20.17:0,20,198
chr10	43834550	.	A	ACG	1388.96	PASS	AB=0.990;AC=24;AF=0.429;AN=56;BaseQRankSum=7.503;DP=678;FS=6.452;HRun=0;HaplotypeScore=246.8206;InbreedingCoeff=-0.0873;MQ=45.66;MQ0=6;MQRankSum=-5.593;QD=3.11;ReadPosRankSum=4.057;VQSLOD=1.7510;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:41,0:41:99:108,0,226	0/1:7,0:7:14.63:54,0,15	0/0:36,0:20:36.54:0,37,440	0/0:33,0:16:25.12:0,25,431	0/0:3,0:3:2.98:0,3,21	0/0:16,0:16:38.95:0,39,437	0/0:38,0:37:99:0,102,1250	0/0:42,0:40:97.90:0,98,690	0/0:35,0:35:99:0,105,1330	0/1:24,0:23:43.83:44,0,206	0/1:7,0:7:7.30:17,0,7	0/1:32,0:29:51.70:63,0,52	0/1:21,1:21:13.56:176,0,14	1/1:21,0:20:29.08:209,29,0	0/1:34,3:35:20.09:94,0,20	0/1:48,1:47:98.81:124,0,99	1/1:18,0:17:5.78:165,6,0	0/1:13,0:14:69.75:70,0,98	0/0:20,0:20:30.09:0,30,294	0/1:13,0:13:16.39:16,0,114	0/1:40,0:40:64.80:65,0,150	1/1:14,0:14:5.55:36,6,0	1/1:15,1:15:1.75:27,2,0	1/1:33,0:32:11.64:96,12,0	0/1:15,0:15:81.57:82,0,85	0/1:19,0:19:8.48:8,0,224	0/1:24,0:24:99:109,0,196	0/0:9,0:9:20.93:0,21,187
chr10	43834558	.	A	ACG	3495.05	PASS	AB=0.856;AC=17;AF=0.304;AN=56;BaseQRankSum=2.124;DP=672;FS=10.786;HRun=0;HaplotypeScore=250.7160;InbreedingCoeff=-0.0568;MQ=39.40;MQ0=15;MQRankSum=-2.068;QD=10.79;ReadPosRankSum=2.725;VQSLOD=1.9677;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:26,14:40:42.26:582,0,42	0/0:7,0:7:7.79:0,8,113	0/1:24,0:6:19.85:20,0,98	0/0:29,0:10:5.07:0,5,220	0/1:4,0:4:0.70:2,0,1	0/0:16,0:16:38.99:0,39,440	0/0:39,0:38:99:0,105,1259	0/1:43,0:40:99:112,0,298	0/0:34,0:34:99:0,102,1274	0/1:18,8:25:61.43:467,0,61	1/1:5,3:8:8.43:102,8,0	0/0:29,0:26:23.15:0,23,196	0/0:20,0:19:13.12:0,13,163	0/0:17,0:16:5.96:0,6,89	0/0:43,0:41:34.76:0,35,218	0/0:55,0:53:67.58:0,68,380	0/1:18,0:17:11.39:11,0,132	0/1:11,5:15:5.37:364,0,5	0/1:23,2:23:72.92:73,0,180	0/1:8,5:13:32.11:178,0,32	0/1:36,10:44:14.52:375,0,15	0/0:15,0:15:4.81:0,5,30	0/0:14,0:13:11.95:0,12,62	0/0:29,0:28:8.51:0,9,51	1/1:7,6:13:9.89:328,10,0	0/1:13,5:19:32.33:296,0,32	0/1:8,12:20:20.01:527,0,20	0/1:9,0:9:4.10:59,0,4
chr10	43834561	.	CGCAA	C	2324.94	PASS	AB=0.982;AC=25;AF=0.446;AN=56;BaseQRankSum=0.080;DP=660;FS=6.813;HRun=0;HaplotypeScore=270.4807;InbreedingCoeff=-0.4463;MQ=38.42;MQ0=14;MQRankSum=-1.327;QD=4.27;ReadPosRankSum=-2.430;VQSLOD=1.3438;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:39,0:39:76.62:203,0,77	0/1:6,0:6:12.71:35,0,13	0/1:22,1:4:46.53:47,0,59	0/1:27,1:11:1.49:1,0,184	0/1:3,0:3:2.27:4,0,2	0/0:14,0:14:40.33:0,40,807	0/0:40,0:39:99:0,111,2208	0/1:41,0:38:99:438,0,548	0/0:35,0:35:85.89:0,86,2131	0/1:26,0:25:99:121,0,112	0/1:8,0:8:3.63:4,0,52	0/1:28,0:25:99:121,0,122	0/1:20,0:19:58.72:213,0,59	0/1:16,1:16:0.47:159,0,0	0/1:42,4:44:99:118,0,457	0/1:55,2:54:61.45:61,0,796	0/1:17,0:16:62.89:63,0,116	1/1:14,0:13:14.74:182,15,0	0/1:25,0:23:65.43:65,0,301	0/0:14,0:14:1.80:0,2,157	0/1:46,0:44:42.05:169,0,42	0/0:13,0:13:3.01:0,3,33	0/1:13,1:13:53.06:53,0,90	1/1:27,0:26:5.97:61,6,0	0/1:13,0:13:67.26:77,0,67	0/1:17,0:17:97.20:150,0,97	0/1:18,0:18:48.28:48,0,178	0/1:9,0:9:8.13:86,0,8
chr10	43834565	.	A	AAC	2887.23	PASS	AB=0.961;AC=26;AF=0.481;AN=54;BaseQRankSum=3.331;DP=675;FS=0.412;HRun=0;HaplotypeScore=275.0814;InbreedingCoeff=0.0376;MQ=37.81;MQ0=14;MQRankSum=-6.853;QD=7.16;ReadPosRankSum=1.554;VQSLOD=2.5157;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:35,4:39:19.98:479,20,0	0/1:6,0:6:9.30:9,0,58	./.	0/0:27,0:8:5.32:0,5,57	1/1:4,0:4:0.83:10,1,0	0/0:17,0:17:41.91:0,42,497	0/0:40,0:39:93.12:0,93,1140	0/1:43,0:40:4.80:5,0,482	0/0:37,0:37:94.12:0,94,1097	1/1:23,5:27:20.15:427,20,0	0/1:7,1:8:2.74:88,0,3	0/1:29,0:26:5.65:6,0,151	0/1:22,0:21:59.16:59,0,79	0/1:17,0:16:12.99:13,0,20	0/0:49,0:46:6.41:0,6,334	0/0:57,0:54:78.87:0,79,910	0/1:16,0:16:73.90:74,0,102	1/1:16,0:15:2:248,2,0	0/1:21,3:23:99:206,0,113	0/1:14,0:14:52.31:123,0,52	0/1:38,9:45:15.60:416,0,16	0/0:13,0:13:2.97:0,3,21	0/0:14,0:13:10.39:0,10,93	1/1:31,0:29:2.85:8,3,0	1/1:12,1:13:5.65:266,6,0	0/1:16,1:17:6.03:218,0,6	1/1:17,0:18:17.42:379,17,0	0/1:9,0:9:11.80:19,0,12
chr10	43834575	.	CGCAA	C	1805.36	PASS	AB=0.986;AC=22;AF=0.407;AN=54;BaseQRankSum=4.162;DP=677;FS=10.405;HRun=0;HaplotypeScore=295.5756;InbreedingCoeff=-0.4962;MQ=37.22;MQ0=15;MQRankSum=-5.008;QD=3.48;ReadPosRankSum=-4.081;VQSLOD=0.6047;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:35,0:35:15.02:15,0,145	0/1:7,0:7:12:35,0,12	./.	0/1:20,0:4:12.21:12,0,65	0/1:4,0:4:0.18:0,0,13	0/0:20,0:20:57.02:0,57,1315	0/0:43,0:42:99:0,121,2726	0/1:34,0:31:99:181,0,318	0/0:36,0:36:81.98:0,82,2325	0/1:31,0:30:32.61:33,0,367	0/0:8,0:8:14.21:0,14,107	0/1:33,0:30:21.13:186,0,21	0/1:24,0:23:11.27:241,0,11	1/1:16,1:16:17.36:190,17,0	0/1:46,4:47:99:250,0,237	0/1:56,2:55:99:276,0,647	0/1:18,1:18:85.12:85,0,115	0/1:16,0:15:42.65:51,0,43	0/1:26,0:22:51.44:51,0,201	0/0:15,0:15:28.26:0,28,223	0/1:44,0:42:71.99:72,0,221	0/0:14,1:14:1.47:0,1,5	0/1:13,2:14:53.71:54,0,85	0/1:31,0:29:13.54:52,0,14	0/1:15,0:15:38.70:39,0,91	0/1:18,0:18:42.16:42,0,134	0/1:18,0:18:74.75:75,0,150	0/1:4,0:4:16:21,0,16
chr10	43834577	.	CAA	C	1035.52	PASS	AB=0.982;AC=23;AF=0.411;AN=56;BaseQRankSum=5.592;DP=663;FS=0.404;HRun=3;HaplotypeScore=282.5636;InbreedingCoeff=-0.3317;MQ=36.85;MQ0=16;MQRankSum=-8.648;QD=2.11;ReadPosRankSum=3.109;VQSLOD=-0.5444;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:33:68.74:69,0,69	0/0:8,0:8:8.74:0,9,56	0/0:23,0:2:3.01:0,3,32	0/1:20,0:4:14.88:15,0,25	1/1:4,0:4:0.55:29,1,0	0/0:20,0:20:57.18:0,57,1009	0/0:42,1:42:99:0,103,1907	0/1:33,1:31:99:120,0,181	0/0:36,0:36:74.20:0,74,1614	0/1:29,1:29:99:136,0,153	0/1:10,0:10:1.30:1,0,29	0/1:33,0:30:50.48:50,0,67	0/1:22,0:22:37.88:105,0,38	1/1:17,0:16:9.65:74,10,0	0/1:48,2:47:94.25:192,0,94	0/1:57,1:55:99:109,0,551	0/1:17,0:16:11:11,0,87	0/1:13,0:12:25.22:25,0,78	0/0:25,0:21:0.92:0,1,152	0/1:14,0:14:30.82:31,0,51	0/1:41,0:39:17.16:17,0,155	0/0:15,0:14:2.80:0,3,14	0/1:14,1:14:5.87:6,0,85	0/1:29,1:28:5.57:15,0,6	1/1:14,0:14:19.34:93,19,0	0/1:17,0:17:45.76:71,0,46	0/1:17,1:18:19.02:19,0,51	0/0:2,0:2:2.05:0,2,14
chr10	43834579	.	AAC	A	2345.05	PASS	AB=0.766;AC=26;AF=0.481;AN=54;BaseQRankSum=6.089;DP=655;FS=5.201;HRun=0;HaplotypeScore=278.8468;InbreedingCoeff=-0.2417;MQ=35.20;MQ0=17;MQRankSum=-5.770;QD=4.69;ReadPosRankSum=2.351;VQSLOD=2.0012;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:22,12:34:16.14:267,0,16	0/1:6,0:8:12.41:12,0,62	0/0:22,0:2:2.99:0,3,23	0/0:19,0:4:3.40:0,3,18	1/1:4,0:4:0.47:12,0,0	0/0:19,0:19:51.17:0,51,829	0/0:41,1:41:58.44:0,58,1450	0/1:27,1:30:3.63:82,0,4	0/0:34,0:34:65.92:0,66,1434	0/1:19,12:30:99:317,0,252	1/1:6,4:10:5.55:74,6,0	0/1:22,0:30:26.81:27,0,76	0/1:16,0:22:37.65:38,0,81	0/1:12,0:16:0.96:17,0,1	0/1:30,7:47:30.34:332,0,30	0/1:29,5:55:99:312,0,338	0/1:13,0:17:45.09:45,0,108	0/1:10,5:14:88.84:133,0,89	0/1:17,5:18:57.97:58,0,148	1/1:6,8:14:9.29:150,9,0	0/1:35,5:38:47:95,0,47	1/1:7,0:12:1.82:5,2,0	0/0:13,0:14:2.91:0,3,52	0/1:21,0:25:0.14:0,0,7	1/1:6,8:14:20.61:201,21,0	0/1:11,8:19:99:206,0,152	0/1:10,8:18:40.41:113,0,40	./.
chr10	43834583	.	C	CGCAA	1399.23	PASS	AB=0.993;AC=15;AF=0.268;AN=56;BaseQRankSum=7.864;DP=682;FS=0.847;HRun=0;HaplotypeScore=329.3648;InbreedingCoeff=-0.2399;MQ=34.81;MQ0=16;MQRankSum=-8.095;QD=3.76;ReadPosRankSum=-5.756;VQSLOD=0.9307;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:35,0:35:14.21:14,0,437	0/1:7,0:7:12.30:12,0,20	0/0:24,0:2:3.01:0,3,32	0/0:20,0:5:2.97:0,3,97	0/1:5,0:5:9.04:58,0,9	0/0:20,0:20:60.17:0,60,1137	0/0:40,0:39:99:0,107,2094	0/0:32,0:30:62.36:0,62,650	0/0:36,0:36:99:0,102,2026	0/0:32,0:32:86.89:0,87,1001	0/1:10,0:10:22.81:23,0,160	0/1:39,0:36:99:304,0,156	0/1:24,0:23:99:103,0,163	0/1:17,0:16:64.71:69,0,65	0/1:48,3:48:99:371,0,186	0/1:54,2:54:99:309,0,272	0/1:22,0:21:84.26:84,0,219	0/0:15,0:14:32.91:0,33,375	0/0:23,0:18:37.82:0,38,450	0/0:13,0:13:3.59:0,4,275	0/1:41,0:39:28.21:28,0,267	1/1:14,0:13:7.24:106,7,0	0/1:17,0:16:33.26:33,0,94	0/1:33,0:31:21.08:40,0,21	0/0:13,0:13:11.58:0,12,243	0/0:20,0:20:54.07:0,54,664	0/0:19,0:19:47.86:0,48,554	0/0:3,0:3:2.97:0,3,20
chr10	43834597	.	AACAC	A	580.52	PASS	AB=0.992;AC=13;AF=0.232;AN=56;BaseQRankSum=1.765;DP=715;FS=3.119;HRun=0;HaplotypeScore=344.0609;InbreedingCoeff=-0.1156;MQ=35.87;MQ0=15;MQRankSum=-5.997;QD=1.66;ReadPosRankSum=1.861;VQSLOD=1.4297;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:16.04:0,16,260	1/1:4,2:6:14.20:118,14,0	0/0:33,0:5:10.54:0,11,113	0/0:32,0:7:3.59:0,4,138	0/0:6,0:6:8.27:0,8,45	0/0:19,0:19:51.17:0,51,1254	0/0:36,0:36:92.63:0,93,2048	0/1:28,0:28:63.37:91,0,63	0/0:41,0:41:99:0,108,2467	0/0:37,0:37:33.87:0,34,711	0/1:10,0:10:3.24:3,0,75	0/1:41,0:40:72.89:73,0,549	0/1:19,0:18:29.02:29,0,160	0/1:21,0:21:24.19:24,0,260	0/1:53,2:52:93.88:94,0,431	0/1:61,1:59:99:158,0,439	0/1:22,1:22:52.42:52,0,104	0/0:16,0:16:13.77:0,14,194	0/0:20,0:16:24.01:0,24,248	0/0:15,0:15:26.30:0,26,234	0/1:33,0:31:46.74:47,0,105	0/0:16,0:15:5.23:0,5,217	0/1:19,0:18:11.80:12,0,229	0/1:32,0:30:11.09:33,0,11	0/0:14,0:14:23.41:0,23,148	0/0:22,0:22:38.14:0,38,501	0/0:14,0:14:27.24:0,27,263	0/0:5,0:5:14.95:0,15,122
chr10	43834607	.	CACACACAAACACACACGT	C	3947.02	PASS	AB=0.977;AC=22;AF=0.393;AN=56;BaseQRankSum=4.574;DP=751;FS=13.397;HRun=0;HaplotypeScore=463.7661;InbreedingCoeff=-0.3687;MQ=35.83;MQ0=21;MQRankSum=-5.303;QD=7.71;ReadPosRankSum=0.897;VQSLOD=-0.1789;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:31:99:149,0,117	1/1:6,0:6:6.05:178,6,0	0/0:59,0:13:36.01:0,36,768	0/0:42,0:9:25.58:0,26,430	0/0:9,0:9:11.02:0,11,91	0/0:18,0:18:54.11:0,54,2567	0/0:39,0:38:99:0,114,3378	0/1:8,19:27:14.41:963,0,14	0/0:40,0:40:99:0,110,4256	0/1:33,0:33:49.96:50,0,372	0/1:13,0:13:29.31:29,0,110	0/1:41,0:40:99:234,0,134	0/1:20,0:19:52.22:121,0,52	0/1:24,0:24:68.66:69,0,117	0/1:52,0:50:87.26:533,0,87	0/1:61,0:58:99:846,0,187	0/1:23,0:22:79.62:134,0,80	0/1:18,0:17:65.93:66,0,72	0/1:16,0:14:15.85:16,0,88	0/0:15,0:15:7:0,7,195	0/1:36,0:34:27.32:229,0,27	0/1:19,0:18:43.11:103,0,43	0/1:18,0:18:53.24:70,0,53	0/1:29,0:29:2.78:60,0,3	0/1:13,0:13:14.69:15,0,142	0/1:22,0:22:35.61:36,0,314	0/0:16,0:16:14.54:0,15,225	1/1:6,0:6:4.04:47,4,0
chr10	43834608	.	A	ACG	4928.95	PASS	AB=0.807;AC=18;AF=0.321;AN=56;BaseQRankSum=3.703;DP=765;FS=10.620;HRun=0;HaplotypeScore=335.9898;InbreedingCoeff=0.0066;MQ=35.87;MQ0=21;MQRankSum=-5.511;QD=13.04;ReadPosRankSum=1.384;VQSLOD=3.3797;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:20,13:33:69.01:366,0,69	0/0:6,0:6:2.81:0,3,48	0/0:60,0:13:25.99:0,26,258	0/0:42,0:10:21.53:0,22,161	1/1:6,3:9:9.03:125,9,0	0/0:18,0:18:47.22:0,47,754	0/0:37,0:36:99:0,108,1484	0/0:27,0:27:14.41:0,14,270	0/0:38,1:39:71.19:0,71,1541	0/1:20,14:34:99:742,0,192	0/1:12,3:15:26.73:122,0,27	0/0:40,0:39:68.93:0,69,478	0/0:21,0:20:35.20:0,35,251	0/0:25,0:25:15.42:0,15,141	0/1:45,9:51:99:533,0,127	0/1:48,13:58:99:672,0,443	0/1:23,0:22:14.50:14,0,140	1/1:12,6:17:22.96:475,23,0	0/1:14,4:16:1.57:277,0,2	0/1:12,3:15:99:107,0,129	0/1:33,5:35:18.75:260,0,19	0/0:19,0:18:23.21:0,23,150	0/0:19,0:19:5.52:0,6,88	0/0:32,0:30:6.14:0,6,20	0/1:10,4:14:85.52:137,0,86	0/1:12,12:24:99:615,0,101	0/1:11,5:16:99:221,0,146	1/1:1,5:6:18.02:264,18,0
chr10	43834610	.	ACACAAACACACACG	A	14746.52	PASS	AB=0.936;AC=41;AF=0.732;AN=56;BaseQRankSum=8.612;DP=732;FS=15.758;HRun=0;HaplotypeScore=376.1346;InbreedingCoeff=0.5169;MQ=37.61;MQ0=20;MQRankSum=-8.920;QD=27.88;ReadPosRankSum=-0.236;VQSLOD=2.0270;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:30:55.32:1032,55,0	0/1:5,1:6:5.50:105,0,6	0/0:61,0:15:41.85:0,42,866	0/0:46,0:10:12.88:0,13,481	1/1:8,0:8:12.03:134,12,0	0/0:19,0:19:57.13:0,57,2955	0/0:37,0:37:99:0,111,3919	0/1:26,0:26:59.28:59,0,130	0/0:40,0:40:23.09:0,23,4697	1/1:31,0:31:36.04:1575,36,0	1/1:12,0:12:27.04:422,27,0	1/1:37,2:38:40.59:867,41,0	0/1:19,0:18:53.47:369,0,53	1/1:23,0:23:22.50:600,23,0	1/1:48,4:49:13.93:1334,14,0	0/1:56,4:59:99:1449,0,157	0/1:20,3:22:17.79:626,0,18	1/1:18,0:17:17.13:678,17,0	1/1:14,0:13:14.13:535,14,0	1/1:14,0:14:39.10:627,39,0	1/1:36,0:33:32.31:736,32,0	1/1:15,2:16:33.08:457,33,0	1/1:19,0:19:10.21:384,10,0	1/1:31,0:29:1.16:5,1,0	1/1:11,0:11:33.11:615,33,0	1/1:22,0:22:44.76:1116,45,0	1/1:12,0:12:33.09:536,33,0	1/1:6,0:6:18.06:488,18,0
chr10	43834623	.	CGT	C	879.11	PASS	AB=0.893;AC=12;AF=0.214;AN=56;BaseQRankSum=2.961;DP=749;FS=3.353;HRun=0;HaplotypeScore=319.4167;InbreedingCoeff=0.1717;MQ=39.27;MQ0=14;MQRankSum=-3.217;QD=3.36;ReadPosRankSum=-6.068;VQSLOD=1.1077;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,1:25:27.75:0,28,129	1/1:4,3:7:10.46:103,10,0	0/0:64,0:20:57.02:0,57,933	0/0:50,0:13:33:0,33,520	0/1:16,0:16:3.12:3,0,4	0/0:21,0:21:62.95:0,63,1138	0/0:38,0:38:99:0,108,2018	1/1:19,0:19:11.51:140,12,0	0/0:40,0:40:99:0,114,2085	0/0:30,0:30:48.65:0,49,240	0/0:10,0:10:5.10:0,5,20	0/0:36,5:41:26.90:0,27,497	0/0:14,0:14:17.57:0,18,198	0/0:27,0:27:20.19:0,20,261	0/1:42,8:49:99:180,0,103	0/1:43,16:58:99:411,0,161	0/1:21,3:25:27.89:102,0,28	0/1:11,3:14:43.69:44,0,89	0/1:13,0:13:26.01:26,0,43	0/0:11,0:11:15.26:0,15,82	0/0:33,5:37:20.33:0,20,101	0/0:23,0:23:28.65:0,29,292	0/0:13,1:14:22.35:0,22,200	0/1:28,5:32:11.75:18,0,12	0/0:14,0:14:9.08:0,9,46	0/1:23,0:25:4.78:5,0,150	0/0:16,0:16:13.68:0,14,71	0/0:10,0:10:12.48:0,12,59
chr10	43834629	.	AAC	A	12312.89	PASS	AB=0.602;AC=41;AF=0.732;AN=56;BaseQRankSum=11.004;DP=804;FS=27.587;HRun=0;HaplotypeScore=282.7060;InbreedingCoeff=0.7353;MQ=41.45;MQ0=12;MQRankSum=-11.230;QD=21.99;ReadPosRankSum=-0.499;VQSLOD=3.6407;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,29:30:53.96:586,54,0	1/1:3,4:7:11.99:136,12,0	0/0:63,1:20:40.76:0,41,656	0/0:59,0:21:54.13:0,54,774	1/1:1,17:18:30.70:303,31,0	0/0:20,0:21:56.93:0,57,918	0/0:39,0:39:99:0,105,1688	0/0:23,0:23:69.23:0,69,1104	0/0:37,1:38:67.12:0,67,1678	1/1:4,28:32:90.27:1139,90,0	1/1:0,10:10:22.94:240,23,0	1/1:9,38:47:89.81:1036,90,0	1/1:1,14:15:37.36:459,37,0	1/1:6,23:29:65.96:725,66,0	1/1:20,33:51:32.51:813,33,0	0/1:28,33:60:6.91:935,0,7	1/1:5,21:27:34.36:507,34,0	0/1:5,9:14:46.54:372,0,47	0/1:3,14:17:21.16:489,0,21	1/1:2,9:11:26.98:292,27,0	1/1:10,37:46:62.57:696,63,0	1/1:2,24:25:65.84:712,66,0	1/1:3,13:16:35.82:402,36,0	1/1:9,23:31:35.53:309,36,0	1/1:1,13:14:42.01:479,42,0	1/1:5,24:29:68.82:871,69,0	1/1:0,15:15:39.04:462,39,0	1/1:1,9:10:30.03:350,30,0
chr10	43834993	.	T	TTTTA	579.65	PASS	AB=0.833;AC=2;AF=0.036;AN=56;BaseQRankSum=4.036;DP=720;FS=1.197;HRun=0;HaplotypeScore=158.7064;InbreedingCoeff=-0.0371;MQ=65.39;MQ0=0;MQRankSum=4.687;QD=12.33;ReadPosRankSum=-2.592;VQSLOD=3.0122;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,150,2921	0/0:12,0:12:33.11:0,33,657	0/1:15,8:17:99:552,0,280	0/1:22,2:19:99:117,0,772	0/0:18,0:18:51.10:0,51,927	0/0:21,0:21:63.16:0,63,1218	0/0:31,0:31:90.31:0,90,1787	0/0:31,0:31:87.28:0,87,1698	0/0:28,0:28:81.26:0,81,1558	0/0:27,0:27:72.24:0,72,1357	0/0:17,0:17:44.43:0,44,818	0/0:27,0:27:78.27:0,78,1558	0/0:14,0:14:42.14:0,42,839	0/0:12,0:12:30.10:0,30,599	0/0:35,0:35:99:0,99,1937	0/0:44,0:44:99:0,114,2231	0/0:36,0:36:99:0,105,1972	0/0:30,0:30:87.30:0,87,1683	0/0:25,0:23:66.23:0,66,1318	0/0:15,0:15:45.07:0,45,811	0/0:36,0:36:99:0,102,1990	0/0:22,0:22:63.16:0,63,1167	0/0:20,0:20:54.18:0,54,1042	0/0:25,0:25:69.17:0,69,1301	0/0:21,0:21:60.16:0,60,1139	0/0:25,0:25:75.26:0,75,1486	0/0:32,0:32:96.33:0,96,1870	0/0:17,0:17:45.15:0,45,890
chr10	43835301	.	CG	C	1397.08	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.743;DP=613;FS=0.000;HRun=2;HaplotypeScore=67.7134;InbreedingCoeff=0.9680;MQ=84.89;MQ0=0;MQRankSum=-1.612;QD=33.26;ReadPosRankSum=1.949;VQSLOD=3.6610;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,150,2222	0/0:5,0:5:15.05:0,15,224	0/0:21,0:21:45.14:0,45,637	0/0:17,0:17:51.17:0,51,730	0/0:12,0:12:33.10:0,33,475	0/0:16,0:16:48.13:0,48,660	0/0:33,0:33:99:0,99,1479	0/0:23,0:23:66.21:0,66,957	0/0:15,0:15:45.15:0,45,668	0/0:20,0:20:51.16:0,51,714	0/0:15,0:15:42.11:0,42,572	0/0:31,0:31:93.31:0,93,1391	0/0:21,0:21:63.20:0,63,923	0/0:27,0:27:78.26:0,78,1165	1/1:0,26:26:72.23:935,72,0	1/1:0,16:16:45.15:584,45,0	0/0:24,0:24:72.24:0,72,1078	0/0:36,0:36:99:0,105,1551	0/0:19,0:19:51.16:0,51,740	0/0:13,0:13:27.09:0,27,404	0/0:55,0:55:99:0,163,2404	0/0:15,0:15:45.13:0,45,622	0/0:6,0:6:12.04:0,12,170	0/0:25,0:25:75.25:0,75,1124	0/0:15,0:15:42.06:0,42,579	0/0:29,0:29:84.25:0,84,1233	0/0:21,0:20:63.18:0,63,919	0/0:5,0:5:15.05:0,15,223
chr10	43837060	.	A	ATAAAT	5230.27	PASS	AB=0.638;AC=24;AF=0.429;AN=56;BaseQRankSum=13.315;DP=338;FS=33.190;HRun=0;HaplotypeScore=109.7316;InbreedingCoeff=-0.4379;MQ=53.96;MQ0=0;MQRankSum=-9.919;QD=18.88;ReadPosRankSum=2.960;VQSLOD=2.5292;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:9,0:16:99:238,0,152	0/1:5,0:12:99:203,0,119	0/0:8,0:5:9.29:0,9,158	0/0:8,0:6:11.67:0,12,144	0/1:7,0:17:99:270,0,107	0/0:21,0:21:63.20:0,63,1322	0/0:10,0:10:30.09:0,30,618	0/1:10,0:26:99:352,0,394	0/0:8,0:8:21.05:0,21,415	0/1:7,0:16:65.35:415,0,65	1/1:4,0:11:1.77:278,2,0	0/1:6,0:10:36.36:250,0,36	0/1:3,0:7:62.82:140,0,63	0/0:3,0:3:8.90:0,9,99	0/1:2,0:11:65.81:210,0,66	0/1:1,1:6:20.79:52,0,21	0/1:9,0:23:99:208,0,248	0/1:4,0:8:84.30:97,0,84	0/1:10,0:18:99:319,0,172	0/1:5,0:15:21.62:413,0,22	0/1:2,0:3:23.44:23,0,36	1/1:0,0:1:3.01:32,3,0	1/1:3,0:8:2.19:199,2,0	0/0:2,0:3:5.89:0,6,57	0/1:4,0:15:38.75:398,0,39	0/1:8,0:21:62.09:453,0,62	0/1:6,0:15:67.26:350,0,67	0/1:9,0:16:77.98:331,0,78
chr10	43837084	.	T	TA	6805.40	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=3.489;DP=387;FS=5.807;HRun=8;HaplotypeScore=96.2251;InbreedingCoeff=0.9002;MQ=63.04;MQ0=0;MQRankSum=-4.986;QD=28.96;ReadPosRankSum=2.211;VQSLOD=4.4244;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,15:19:42.12:484,42,0	0/0:14,0:14:34.92:0,35,203	0/0:13,0:11:16.42:0,16,178	0/0:10,0:8:6.29:0,6,100	1/1:1,16:17:47.99:498,48,0	0/0:18,0:18:45.02:0,45,412	0/0:12,0:12:30.01:0,30,271	0/0:28,0:28:57.83:0,58,317	0/0:8,0:8:23.98:0,24,209	1/1:1,17:18:51.13:570,51,0	1/1:4,10:14:30.09:345,30,0	1/1:1,10:11:33.09:371,33,0	1/1:0,6:6:18.05:208,18,0	1/1:0,1:1:3.01:35,3,0	0/0:13,0:13:26.13:0,26,153	0/0:11,0:11:22.97:0,23,122	0/0:24,1:25:30.18:0,30,288	1/1:1,6:6:15.04:173,15,0	1/1:4,22:25:63.12:699,63,0	1/1:3,13:16:39.12:450,39,0	1/1:1,2:3:3.01:35,3,0	1/1:0,5:5:14.79:120,15,0	1/1:0,12:12:36.11:413,36,0	1/1:0,1:1:3.01:35,3,0	1/1:3,17:20:48.14:554,48,0	1/1:1,26:27:78.23:900,78,0	1/1:5,13:17:45.11:502,45,0	1/1:2,12:14:36.11:415,36,0
chr10	43837315	.	CG	C	1808.49	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=3.284;DP=782;FS=0.557;HRun=1;HaplotypeScore=137.8094;InbreedingCoeff=0.9623;MQ=82.72;MQ0=0;MQRankSum=-1.497;QD=37.68;ReadPosRankSum=2.434;VQSLOD=3.2853;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,157,2482	1/1:0,12:12:33.11:462,33,0	0/0:34,0:34:96.03:0,96,1408	0/0:25,0:25:72.20:0,72,1079	0/0:12,0:12:36.12:0,36,575	0/0:18,0:18:54.14:0,54,834	0/0:28,0:28:84.29:0,84,1342	0/0:27,0:27:78.25:0,78,1204	0/0:39,0:39:99:0,117,1857	0/0:12,0:12:36.12:0,36,574	0/0:10,0:10:27.05:0,27,403	0/0:31,0:31:90.29:0,90,1409	0/0:22,0:22:66.19:0,66,1001	0/0:27,0:27:81.24:0,81,1260	0/0:52,0:52:99:0,153,2404	0/0:54,0:54:99:0,160,2538	1/1:0,36:36:99:1468,105,0	0/0:14,0:14:39.12:0,39,599	0/0:19,0:19:54.17:0,54,819	0/0:16,0:16:48.16:0,48,765	0/0:95,0:95:99:0,283,4440	0/0:3,0:3:9.03:0,9,144	0/0:23,0:23:60.19:0,60,929	0/0:41,0:41:99:0,123,1958	0/0:16,0:16:45.13:0,45,686	0/0:30,0:30:90.29:0,90,1411	0/0:27,0:26:81.28:0,81,1284	0/0:7,0:7:15.05:0,15,218
chr10	43837833	.	T	TGCGCGCGCGC	7007.29	PASS	AB=0.965;AC=30;AF=0.536;AN=56;BaseQRankSum=2.961;DP=665;FS=51.514;HRun=0;HaplotypeScore=259.4551;InbreedingCoeff=0.0241;MQ=62.92;MQ0=1;MQRankSum=-6.301;QD=13.50;ReadPosRankSum=-0.972;VQSLOD=1.9446;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:52,0:52:99:373,0,230	1/1:1,9:15:15.05:653,15,0	0/0:31,0:25:63.21:0,63,1700	0/0:23,0:20:48.06:0,48,1363	0/1:20,0:20:30.08:167,0,30	0/0:17,0:17:45.13:0,45,1229	0/0:23,0:23:63.13:0,63,1720	0/0:24,0:24:69.12:0,69,1827	0/0:28,0:28:72.25:0,72,2171	0/1:25,0:25:95.34:554,0,95	0/1:19,0:19:92.77:179,0,93	1/1:6,0:27:16.70:132,17,0	0/1:10,0:24:6:129,0,6	1/1:4,0:20:8.28:46,8,0	1/1:18,0:18:24.08:661,24,0	1/1:14,0:14:21.07:549,21,0	1/1:5,12:27:29.70:1149,30,0	0/1:32,0:32:99:357,0,103	0/1:24,0:23:99:210,0,120	0/1:11,0:11:55.22:137,0,55	0/1:56,0:56:99:422,0,205	1/1:4,0:16:20.10:116,20,0	1/1:6,0:24:15.27:113,15,0	0/1:18,0:21:0.50:160,0,1	0/1:22,0:22:69.01:149,0,69	0/1:24,0:24:99:480,0,112	0/1:20,0:20:99:196,0,206	0/1:8,0:8:75.06:75,0,116
chr10	43837841	.	C	CGCGCGT	3489.23	PASS	AB=1.000;AC=22;AF=0.393;AN=56;BaseQRankSum=2.416;DP=631;FS=1.924;HRun=0;HaplotypeScore=217.5629;InbreedingCoeff=-0.0121;MQ=60.80;MQ0=1;MQRankSum=-9.773;QD=9.04;ReadPosRankSum=-1.793;VQSLOD=2.7066;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:45,0:45:87.69:88,0,515	1/1:10,1:11:17.09:419,17,0	0/0:34,0:25:64.73:0,65,1081	0/0:26,0:21:50.62:0,51,846	0/0:17,0:17:0.73:0,1,109	0/0:15,0:16:48.13:0,48,971	0/0:21,0:21:54.17:0,54,1172	0/0:24,0:24:69.20:0,69,1472	0/0:25,0:25:75.26:0,75,1727	0/1:27,0:27:99:273,0,201	0/1:16,0:16:31.63:32,0,129	1/1:21,0:21:3.83:57,4,0	0/1:18,0:18:4.80:39,0,5	0/1:16,0:16:4.25:32,0,4	1/1:7,16:25:27.09:924,27,0	1/1:3,12:20:18.06:653,18,0	0/1:25,0:25:12.35:483,0,12	0/1:31,0:31:64.21:64,0,354	0/1:25,0:24:58.30:58,0,220	0/0:7,0:7:8.53:0,9,91	0/0:54,0:54:26.81:0,27,601	0/1:15,0:15:9.12:57,0,9	0/1:20,0:20:1.23:46,0,1	0/1:21,0:21:24.82:42,0,25	0/0:21,0:21:34.20:0,34,265	0/1:20,0:20:99:147,0,199	0/1:20,0:20:56.02:56,0,277	0/1:10,0:10:19.03:19,0,186
chr10	43838693	.	T	TCC	4071.79	PASS	AC=36;AF=0.667;AN=54;BaseQRankSum=7.369;DP=534;FS=4.894;HRun=0;HaplotypeScore=133.1413;InbreedingCoeff=0.8622;MQ=45.69;MQ0=32;MQRankSum=-1.618;QD=11.63;ReadPosRankSum=0.876;VQSLOD=3.5062;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:28:28.15:446,28,0	0/0:5,0:4:5.98:0,6,50	0/0:21,0:2:6.01:0,6,72	0/0:18,0:5:7.96:0,8,77	1/1:27,2:25:25.90:318,26,0	0/0:25,0:25:64.39:0,64,819	0/0:18,0:17:51.14:0,51,660	./.	0/0:15,0:14:33.11:0,33,465	1/1:17,0:16:38.04:369,38,0	1/1:10,0:8:14.63:138,15,0	1/1:18,0:18:29.66:156,30,0	1/1:20,0:19:5.49:50,5,0	1/1:27,0:26:5.38:60,5,0	0/0:26,0:26:73.93:0,74,586	0/0:21,0:21:56.60:0,57,475	0/0:33,0:31:72.50:0,73,647	1/1:23,0:20:49.95:403,50,0	1/1:19,0:14:25.58:220,26,0	1/1:23,1:20:17.26:269,17,0	1/1:11,0:11:20.95:244,21,0	1/1:14,0:12:4.56:88,5,0	1/1:13,0:12:13.29:55,13,0	1/1:10,0:5:0.80:2,1,0	1/1:18,0:17:24.48:219,24,0	1/1:29,1:28:55.64:431,56,0	1/1:19,1:18:37.65:312,38,0	1/1:17,0:16:35.56:293,36,0
chr10	43838697	.	T	TCC	4645.32	PASS	AB=0.993;AC=31;AF=0.574;AN=54;BaseQRankSum=6.625;DP=546;FS=30.742;HRun=0;HaplotypeScore=135.5004;InbreedingCoeff=0.5375;MQ=45.61;MQ0=31;MQRankSum=-4.370;QD=12.90;ReadPosRankSum=2.064;VQSLOD=2.9434;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:27:54.38:488,54,0	0/0:5,0:4:5.88:0,6,43	0/0:18,0:2:5.98:0,6,46	0/0:17,0:5:8.54:0,9,76	1/1:28,0:24:11.71:408,12,0	0/0:25,0:25:67.03:0,67,822	0/0:18,0:17:51.10:0,51,603	./.	0/0:17,0:16:36.06:0,36,466	1/1:16,0:15:15.19:283,15,0	1/1:12,0:10:18.26:171,18,0	1/1:21,0:20:31.37:295,31,0	0/1:20,0:19:11.32:123,0,11	0/1:26,1:26:40.72:186,0,41	0/0:28,0:28:80.58:0,81,867	0/0:22,0:22:57.15:0,57,679	0/0:34,0:32:81.05:0,81,971	1/1:21,2:20:15.90:347,16,0	0/1:20,0:15:26.97:255,0,27	1/1:25,0:21:8.70:195,9,0	1/1:10,0:10:16.74:168,17,0	0/1:15,0:13:22.75:49,0,23	1/1:14,1:14:8.33:122,8,0	1/1:11,0:6:5.53:68,6,0	0/1:19,0:18:22.24:305,0,22	1/1:26,3:27:57.09:622,57,0	1/1:22,1:21:18.01:339,18,0	1/1:17,0:16:15.41:223,15,0
chr10	43838703	.	C	CT	6736.43	PASS	AB=0.842;AC=41;AF=0.854;AN=48;BaseQRankSum=6.821;DP=529;FS=12.075;HRun=23;HaplotypeScore=118.9503;InbreedingCoeff=0.7846;MQ=44.17;MQ0=31;MQRankSum=-0.877;QD=15.24;ReadPosRankSum=1.647;VQSLOD=4.3362;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:26,4:28:33.04:344,33,0	./.	./.	./.	1/1:20,9:25:33.01:334,33,0	0/0:22,0:22:24.74:0,25,356	0/0:19,0:18:13.57:0,14,231	./.	0/0:16,0:15:14.31:0,14,136	1/1:10,7:16:42.20:393,42,0	1/1:7,6:11:18.05:194,18,0	1/1:14,7:20:44.53:380,45,0	1/1:17,4:20:24.88:229,25,0	1/1:21,5:25:37.59:293,38,0	1/1:23,5:28:65.96:652,66,0	1/1:16,7:23:44.18:422,44,0	1/1:28,6:32:39.02:584,39,0	1/1:22,1:20:35.95:335,36,0	1/1:12,8:16:30.56:343,31,0	1/1:20,3:19:26.25:218,26,0	1/1:10,0:10:15.04:165,15,0	1/1:13,2:13:11.68:82,12,0	1/1:10,3:12:23.96:207,24,0	1/1:10,2:7:8.88:67,9,0	1/1:14,5:18:33.04:341,33,0	1/1:18,10:26:55.36:594,55,0	1/1:12,9:19:37.38:365,37,0	0/1:13,3:15:20.97:194,0,21
chr10	43838785	.	CT	C	404.46	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.922;DP=640;FS=2.165;HRun=1;HaplotypeScore=99.4033;InbreedingCoeff=0.9728;MQ=69.66;MQ0=0;MQRankSum=-3.714;QD=28.89;ReadPosRankSum=-2.570;VQSLOD=2.8650;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:78.25:0,78,1206	0/0:7,0:7:21.07:0,21,335	0/0:17,0:16:45.06:0,45,622	0/0:18,0:17:48.15:0,48,735	0/0:22,0:22:66.23:0,66,1054	0/0:21,0:21:63.19:0,63,960	0/0:21,0:21:63.21:0,63,1006	1/1:0,14:14:42.08:499,42,0	0/0:26,0:26:75.24:0,75,1173	0/0:28,0:28:81.27:0,81,1275	0/0:25,0:24:66.21:0,66,1024	0/0:27,0:26:66.21:0,66,1016	0/0:23,0:23:60.18:0,60,911	0/0:24,0:24:57.17:0,57,864	0/0:30,0:30:84.27:0,84,1316	0/0:26,0:26:69.22:0,69,1077	0/0:23,1:24:27.55:0,28,1001	0/0:21,1:21:15.45:0,15,815	0/0:24,0:24:72.13:0,72,1033	0/0:19,0:19:48.16:0,48,766	0/0:50,1:51:99:0,144,2188	0/0:26,0:26:75.23:0,75,1150	0/0:12,0:12:30.10:0,30,479	0/0:25,0:25:69.16:0,69,1038	0/0:15,0:15:45.13:0,45,673	0/0:27,0:27:75.25:0,75,1179	0/0:28,0:27:72.22:0,72,1124	0/0:6,0:6:18.06:0,18,287
chr10	43838816	.	AC	A	2332.42	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=3.947;DP=698;FS=1.620;HRun=2;HaplotypeScore=84.4119;InbreedingCoeff=0.9991;MQ=86.10;MQ0=0;MQRankSum=-1.061;QD=34.30;ReadPosRankSum=2.057;VQSLOD=4.0816;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,123,1843	0/0:11,0:11:30.10:0,30,450	0/0:26,0:26:72.24:0,72,1073	0/0:27,0:27:75.22:0,75,1099	0/0:17,0:17:48.16:0,48,715	0/0:18,0:18:54.14:0,54,784	0/0:25,0:25:75.24:0,75,1103	0/0:26,0:26:72.20:0,72,1036	0/0:20,0:20:57.18:0,57,833	0/0:32,0:32:93.31:0,93,1377	0/0:24,0:24:72.23:0,72,1054	0/0:22,0:22:63.21:0,63,944	0/0:24,0:23:69.22:0,69,1014	0/0:31,0:31:87.29:0,87,1302	1/1:0,40:40:99:1402,108,0	1/1:0,28:28:81.26:1052,81,0	0/0:13,0:13:36.12:0,36,538	0/0:19,0:19:48.16:0,48,718	0/0:25,0:25:69.23:0,69,1034	0/0:17,0:17:51.16:0,51,743	0/0:57,0:57:99:0,172,2517	0/0:26,0:26:75.25:0,75,1122	0/0:13,0:13:39.12:0,39,563	0/0:31,0:31:93.32:0,93,1393	0/0:18,0:18:54.18:0,54,809	0/0:26,0:25:72.23:0,72,1060	0/0:29,0:28:87.28:0,87,1273	0/0:9,0:9:27.09:0,27,405
chr10	43838965	.	ACTG	A	26454.61	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=10.537;DP=810;FS=4.716;HRun=0;HaplotypeScore=131.5450;InbreedingCoeff=0.9984;MQ=87.87;MQ0=0;MQRankSum=-7.286;QD=39.78;ReadPosRankSum=7.409;VQSLOD=5.3919;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:1,39:40:99:1847,111,0	1/1:1,11:12:27.09:448,27,0	0/0:28,0:28:74.87:0,75,1691	0/0:34,0:34:96.33:0,96,2014	1/1:2,28:29:60.20:986,60,0	0/0:22,0:22:66.23:0,66,1480	0/0:32,0:32:93.31:0,93,2064	1/1:1,24:25:72.21:1136,72,0	0/0:29,0:29:75.26:0,75,1681	1/1:0,30:30:87.27:1395,87,0	1/1:1,20:21:42.14:698,42,0	1/1:0,32:31:81.28:1349,81,0	1/1:0,27:27:75.26:1247,75,0	1/1:2,25:27:63.22:1049,63,0	1/1:2,48:50:99:1998,120,0	1/1:3,36:39:25.31:1431,25,0	1/1:2,36:38:90.31:1497,90,0	1/1:1,21:22:57.16:921,57,0	1/1:1,17:18:51.17:832,51,0	1/1:0,24:24:48.12:769,48,0	1/1:2,41:43:99:1699,102,0	1/1:2,23:25:57.15:917,57,0	1/1:0,17:17:21.07:350,21,0	1/1:1,32:33:81.75:1347,82,0	1/1:0,18:17:36.12:600,36,0	1/1:1,33:34:99:1641,99,0	1/1:1,35:35:90.31:1499,90,0	1/1:2,22:24:48.16:800,48,0
chr10	43840311	.	T	TTAAC	35197.47	PASS	AB=0.544;AC=43;AF=0.796;AN=54;BaseQRankSum=10.383;DP=636;FS=1.812;HRun=0;HaplotypeScore=132.5775;InbreedingCoeff=0.8875;MQ=67.68;MQ0=0;MQRankSum=-8.788;QD=66.16;ReadPosRankSum=0.650;VQSLOD=6.9021;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,31:36:87.26:2353,87,0	1/1:2,9:11:33.03:767,33,0	0/0:17,0:17:45.15:0,45,875	0/0:16,0:16:35.33:0,35,615	1/1:3,24:29:66.10:1602,66,0	0/0:20,0:20:57.18:0,57,1066	0/0:25,0:25:75.20:0,75,1379	1/1:15,23:42:99:3245,126,0	0/0:26,0:26:78.27:0,78,1543	1/1:2,14:17:51.18:1412,51,0	1/1:4,13:18:51.01:1032,51,0	1/1:1,13:16:42.10:1109,42,0	1/1:5,19:25:66.03:1501,66,0	1/1:7,10:18:44.94:937,45,0	1/1:4,17:23:63.09:1523,63,0	0/1:6,30:37:17.63:2284,0,18	1/1:2,33:37:87.30:2362,87,0	1/1:4,14:19:48.09:1204,48,0	1/1:13,23:38:99:2788,108,0	1/1:2,20:22:63.01:1429,63,0	1/1:3,14:17:35.83:815,36,0	1/1:3,13:17:48.04:1010,48,0	1/1:3,9:13:32.98:730,33,0	1/1:1,20:21:57.15:1530,57,0	1/1:5,16:23:60.12:1498,60,0	1/1:1,20:21:63.22:1732,63,0	1/1:7,25:31:93.19:2334,93,0	./.
chr10	43841517	.	CG	C	213.04	PASS	AC=2;AF=0.038;AN=52;BaseQRankSum=-1.555;DP=118;FS=5.545;HRun=1;HaplotypeScore=20.9283;InbreedingCoeff=0.2601;MQ=66.02;MQ0=0;MQRankSum=-1.156;QD=17.75;ReadPosRankSum=0.385;VQSLOD=3.5616;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:26.84:0,27,340	0/0:2,0:2:6.02:0,6,91	0/0:3,0:3:9.02:0,9,118	0/0:2,0:2:5.87:0,6,39	0/0:2,0:2:2.97:0,3,20	0/0:2,0:2:3.01:0,3,46	0/0:8,0:8:21.07:0,21,298	1/1:3,9:12:14.06:299,14,0	0/0:2,0:2:6.02:0,6,89	0/0:3,0:3:9.03:0,9,138	0/0:4,0:4:12.04:0,12,177	0/0:4,0:4:12.04:0,12,170	./.	0/0:3,0:3:9.03:0,9,137	0/0:1,0:1:3.01:0,3,38	./.	0/0:13,0:12:33.05:0,33,448	0/0:5,0:5:9.03:0,9,124	0/0:6,0:6:9.03:0,9,135	0/0:3,0:3:6.02:0,6,90	0/0:6,0:6:15.01:0,15,189	0/0:2,0:2:3.01:0,3,45	0/0:4,0:4:5.30:0,5,87	0/0:5,0:5:12.04:0,12,182	0/0:3,0:3:9:0,9,99	0/0:7,0:7:12.44:0,12,150	0/0:2,0:2:5.97:0,6,64	0/0:2,0:2:6.02:0,6,83
chr10	43841597	.	G	GT	354.65	PASS	AB=1.000;AC=3;AF=0.056;AN=54;BaseQRankSum=-3.349;DP=264;FS=22.205;HRun=3;HaplotypeScore=50.0109;InbreedingCoeff=0.5812;MQ=79.52;MQ0=2;MQRankSum=1.037;QD=15.42;ReadPosRankSum=-3.362;VQSLOD=1.2829;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:35.75:0,36,272	0/1:4,0:4:0.73:1,0,9	0/0:18,0:12:17.80:0,18,143	0/0:14,0:12:19.85:0,20,164	0/0:8,0:8:17.95:0,18,143	0/0:9,0:9:24.02:0,24,240	0/0:13,0:13:36.03:0,36,377	1/1:13,6:18:41.32:448,41,0	0/0:1,0:1:3.01:0,3,35	0/0:7,0:7:20.97:0,21,177	0/0:8,0:8:11.99:0,12,102	0/0:12,0:12:32.53:0,33,242	0/0:5,0:5:14.97:0,15,123	0/0:5,0:5:11.99:0,12,100	0/0:6,0:6:17.95:0,18,147	0/0:10,0:10:26.94:0,27,220	0/0:21,0:21:53.85:0,54,507	0/0:13,0:14:38.36:0,38,291	0/0:13,0:13:26.89:0,27,215	0/0:8,0:8:20.95:0,21,179	./.	0/0:5,0:5:11.96:0,12,93	0/0:4,0:4:8.94:0,9,66	0/0:13,0:13:26.99:0,27,251	0/0:9,0:9:11.37:0,11,86	0/0:9,0:9:20.89:0,21,167	0/0:6,0:6:14.99:0,15,139	0/0:8,0:8:17.96:0,18,160
chr10	43841600	.	TA	T	1385.76	PASS	AB=0.753;AC=35;AF=0.648;AN=54;BaseQRankSum=1.065;DP=262;FS=0.000;HRun=14;HaplotypeScore=42.3932;InbreedingCoeff=0.3857;MQ=76.63;MQ0=2;MQRankSum=-1.893;QD=8.10;ReadPosRankSum=2.470;VQSLOD=2.0935;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,8:13:22.83:156,23,0	0/0:3,0:4:2.84:0,3,14	0/0:17,0:11:8.93:0,9,67	0/0:16,0:13:11.68:0,12,92	1/1:6,3:10:0.13:64,0,0	0/1:9,0:9:0.98:1,0,112	0/0:12,1:13:12.27:0,12,242	0/0:16,1:18:10.25:0,10,173	0/0:1,0:1:3:0,3,28	1/1:1,6:7:17.84:123,18,0	1/1:2,5:7:11.48:72,11,0	1/1:7,6:13:17.72:119,18,0	1/1:3,3:6:11.80:79,12,0	1/1:2,2:4:5.93:41,6,0	1/1:2,4:6:11.89:82,12,0	1/1:0,9:10:28.72:184,29,0	0/0:20,1:21:0.77:0,1,251	1/1:10,5:15:23.34:145,23,0	1/1:8,3:11:8.89:62,9,0	0/1:6,2:9:13.97:49,0,14	./.	1/1:1,3:4:8.92:62,9,0	1/1:3,1:4:2.97:21,3,0	0/1:8,4:12:42.45:42,0,68	1/1:1,6:7:8.92:62,9,0	1/1:5,3:8:8.89:60,9,0	0/1:2,3:6:38.77:47,0,39	0/1:5,5:10:31.54:87,0,32
chr10	43841651	.	AT	A	4216.78	PASS	AB=0.579;AC=45;AF=0.804;AN=56;BaseQRankSum=-1.510;DP=330;FS=23.217;HRun=3;HaplotypeScore=55.2091;InbreedingCoeff=0.7985;MQ=75.45;MQ0=11;MQRankSum=-4.151;QD=25.10;ReadPosRankSum=2.539;VQSLOD=3.1729;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,4:4:12:130,12,0	1/1:5,0:5:8.93:63,9,0	0/0:55,2:24:27.88:0,28,539	0/0:82,0:25:32.21:0,32,399	1/1:1,12:13:39.01:437,39,0	0/0:6,0:6:18:0,18,215	0/0:9,0:9:26.04:0,26,288	1/1:10,13:22:59.65:621,60,0	0/0:3,0:3:8.99:0,9,104	1/1:1,8:9:27.08:318,27,0	1/1:2,2:4:8.98:93,9,0	1/1:8,0:8:23.75:163,24,0	1/1:2,0:2:5.95:42,6,0	1/1:3,0:3:8.89:59,9,0	1/1:4,0:4:11.90:85,12,0	1/1:11,0:11:32.72:230,33,0	1/1:9,2:12:35.39:233,35,0	0/1:3,8:11:0.10:193,0,0	1/1:1,5:6:18.05:211,18,0	1/1:4,5:9:21.43:211,21,0	1/1:1,4:5:14.92:146,15,0	1/1:5,0:5:8.92:63,9,0	1/1:2,0:2:5.97:44,6,0	1/1:4,0:5:14.40:100,14,0	1/1:3,5:8:21.01:218,21,0	1/1:0,6:6:18.05:216,18,0	1/1:4,5:9:23.99:247,24,0	1/1:2,2:4:8.99:95,9,0
chr10	43841653	.	TTA	T	2513.07	PASS	AB=1.000;AC=37;AF=0.661;AN=56;BaseQRankSum=-0.348;DP=351;FS=10.932;HRun=0;HaplotypeScore=69.3232;InbreedingCoeff=0.3906;MQ=74.71;MQ0=11;MQRankSum=-2.729;QD=14.96;ReadPosRankSum=4.596;VQSLOD=2.2523;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:6,0:6:8.07:12,0,8	1/1:0,5:5:9:115,9,0	0/0:65,0:26:41.48:0,41,835	0/0:87,0:25:38.62:0,39,678	1/1:13,1:14:8.24:88,8,0	0/0:6,0:6:18.02:0,18,300	0/0:9,0:9:27.03:0,27,463	0/1:23,0:22:6.35:96,0,6	0/0:3,0:3:9.03:0,9,170	0/1:11,0:11:18.12:33,0,18	0/1:5,0:5:8.59:18,0,9	1/1:1,7:8:24.08:365,24,0	1/1:1,1:2:5.99:68,6,0	1/1:1,3:4:8.99:137,9,0	1/1:0,4:4:12.04:182,12,0	1/1:2,9:11:33.03:464,33,0	1/1:5,7:12:36.04:469,36,0	0/0:12,0:12:0.57:0,1,27	1/1:6,0:6:10.16:46,10,0	0/1:11,0:11:37.19:37,0,52	0/1:5,0:5:1.02:17,0,1	1/1:1,3:4:9.03:139,9,0	1/1:0,2:2:6.02:96,6,0	1/1:4,1:5:14.43:126,14,0	1/1:8,0:8:2.59:58,3,0	1/1:6,0:6:7.12:18,7,0	1/1:9,1:10:15.51:108,16,0	0/1:6,0:6:1.63:2,0,5
chr10	43841670	.	C	CAAA	4837.33	PASS	AB=1.000;AC=46;AF=0.821;AN=56;BaseQRankSum=-0.017;DP=416;FS=24.362;HRun=12;HaplotypeScore=94.3304;InbreedingCoeff=0.5900;MQ=67.17;MQ0=13;MQRankSum=-5.118;QD=15.71;ReadPosRankSum=-0.821;VQSLOD=1.3929;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,0:9:12.03:156,12,0	1/1:3,0:4:6.02:97,6,0	0/1:80,0:30:18.48:18,0,110	0/0:87,0:26:1.19:0,1,143	1/1:9,0:11:12.04:167,12,0	0/0:6,0:6:8.87:0,9,84	0/0:9,0:9:27.08:0,27,302	1/1:14,11:27:54.10:815,54,0	0/0:3,0:5:8.83:0,9,69	1/1:12,0:13:12.02:137,12,0	1/1:2,0:5:9.03:129,9,0	1/1:7,5:15:20.53:300,21,0	1/1:3,2:5:6.02:110,6,0	1/1:4,3:7:18.06:329,18,0	0/1:2,0:2:0:0,0,0	1/1:7,1:13:18.06:269,18,0	1/1:6,0:12:21.03:279,21,0	1/1:13,0:13:10.13:156,10,0	1/1:6,0:11:21.07:310,21,0	1/1:8,0:10:12.04:167,12,0	1/1:4,0:5:6.01:73,6,0	1/1:3,5:8:15.52:260,16,0	1/1:1,1:4:6:78,6,0	1/1:1,2:4:7.27:113,7,0	1/1:14,0:16:24.05:312,24,0	1/1:10,1:12:21.05:269,21,0	1/1:9,0:12:15.04:187,15,0	1/1:3,0:6:9:108,9,0
chr10	43842310	.	G	GGTGTGT	4166.55	PASS	AB=0.984;AC=25;AF=0.446;AN=56;BaseQRankSum=7.637;DP=811;FS=8.606;HRun=0;HaplotypeScore=223.3918;InbreedingCoeff=-0.3988;MQ=62.28;MQ0=13;MQRankSum=-5.059;QD=6.35;ReadPosRankSum=-3.202;VQSLOD=0.8405;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:30:54.91:55,0,95	0/0:11,0:12:1.98:0,2,133	0/1:43,0:26:17.10:17,0,168	0/1:36,0:19:37.71:38,0,106	0/1:20,0:20:7.46:7,0,43	0/0:21,0:21:57.15:0,57,1045	0/0:47,0:48:99:0,104,1978	1/1:28,12:43:64.87:1368,65,0	0/0:42,0:46:91.35:0,91,2043	0/1:21,0:21:99:401,0,101	0/1:18,0:17:0.29:0,0,83	0/1:44,0:43:99:273,0,138	0/1:30,0:31:99:103,0,109	0/1:33,0:32:51.27:230,0,51	0/1:19,0:33:41.42:41,0,59	1/1:40,0:40:39.68:326,40,0	0/1:23,0:24:13.42:13,0,35	0/1:24,0:25:99:164,0,148	0/1:27,0:25:99:222,0,242	0/0:15,0:15:11.81:0,12,146	0/1:67,0:65:60.99:61,0,91	0/0:12,0:13:5.89:0,6,72	0/1:18,0:18:14.97:86,0,15	0/1:31,0:31:26.93:27,0,42	1/1:8,0:8:2:6,2,0	0/1:25,0:24:99:479,0,195	0/1:21,0:21:62.09:199,0,62	0/1:17,0:17:48.79:49,0,147
chr10	43842327	.	GTC	G	920.31	PASS	AB=0.988;AC=17;AF=0.304;AN=56;BaseQRankSum=6.869;DP=867;FS=2.575;HRun=0;HaplotypeScore=179.3900;InbreedingCoeff=-0.2791;MQ=51.78;MQ0=31;MQRankSum=0.934;QD=1.92;ReadPosRankSum=-5.488;VQSLOD=0.3119;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:2.45:0,2,130	0/1:15,0:14:13.79:14,0,110	0/1:31,0:14:18.95:19,0,183	0/1:29,0:11:67.88:68,0,89	0/1:16,0:16:7.47:7,0,18	0/0:26,0:26:59.28:0,59,1028	0/0:52,0:52:96.28:0,96,1952	0/1:38,0:34:76.04:76,0,618	0/0:47,0:46:81.55:0,82,1841	0/1:32,0:30:99:124,0,216	0/1:18,0:17:1.23:1,0,60	0/0:40,0:39:30.19:0,30,289	0/0:29,0:29:17.62:0,18,126	0/0:39,0:38:11.36:0,11,143	0/1:27,8:35:31.82:32,0,54	1/1:21,21:40:54.64:486,55,0	0/1:18,0:18:21.24:21,0,96	0/0:25,0:25:28.53:0,29,227	0/1:31,0:26:55.65:56,0,311	0/1:14,0:14:43.91:44,0,122	0/1:82,0:75:20.02:20,0,80	0/0:14,0:14:5.99:0,6,48	0/0:23,0:20:5.69:0,6,40	0/0:40,0:40:4.24:0,4,28	0/1:19,0:19:7.17:7,0,23	0/1:39,0:36:85.74:86,0,403	0/1:21,0:21:16.32:16,0,124	0/0:19,0:18:15:0,15,189
chr10	43842329	.	C	CTGTGTG	7376.18	PASS	AB=0.864;AC=41;AF=0.788;AN=52;BaseQRankSum=1.032;DP=906;FS=14.420;HRun=0;HaplotypeScore=196.9342;InbreedingCoeff=0.5132;MQ=51.13;MQ0=31;MQRankSum=-3.149;QD=10.26;ReadPosRankSum=-1.682;VQSLOD=2.6493;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:8,27:38:12.02:243,12,0	1/1:14,0:13:5.16:59,5,0	0/0:29,0:11:6:0,6,66	0/1:30,0:11:4.69:5,0,65	./.	0/0:26,0:26:44.94:0,45,1058	0/0:52,0:52:99:0,115,2098	0/1:41,0:36:99:186,0,648	0/0:46,0:45:99:0,120,2353	1/1:8,27:36:65.29:1322,65,0	1/1:10,8:17:2.60:10,3,0	1/1:9,30:40:20.64:516,21,0	1/1:4,26:33:6.02:188,6,0	1/1:8,30:38:17.85:397,18,0	1/1:34,0:35:14.57:166,15,0	1/1:41,0:39:41.65:555,42,0	1/1:16,1:17:16.49:135,16,0	0/1:9,17:29:1.82:337,0,2	1/1:27,3:25:36.02:644,36,0	1/1:14,0:15:18.03:235,18,0	1/1:25,61:86:8.54:187,9,0	./.	1/1:7,14:23:6.02:163,6,0	1/1:6,34:42:3.01:65,3,0	1/1:1,17:19:5.88:58,6,0	1/1:9,29:37:55.12:1391,55,0	1/1:7,13:20:11.05:412,11,0	1/1:5,14:19:3.01:102,3,0
chr10	43842339	.	GTA	G	697.76	PASS	AB=0.993;AC=15;AF=0.268;AN=56;BaseQRankSum=7.304;DP=870;FS=2.413;HRun=0;HaplotypeScore=173.5651;InbreedingCoeff=0.2585;MQ=48.04;MQ0=35;MQRankSum=-3.681;QD=2.50;ReadPosRankSum=-2.100;VQSLOD=2.3515;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:17.19:0,17,150	1/1:4,5:8:3.46:28,3,0	0/0:16,0:3:6:0,6,81	0/1:19,0:4:4.49:4,0,60	0/0:17,0:17:6:0,6,73	0/0:22,0:22:45.23:0,45,1035	0/0:53,0:52:99:0,132,2145	0/0:45,0:37:32.01:0,32,1090	0/0:42,0:41:99:0,123,2222	0/1:38,0:35:14.49:14,0,552	0/0:16,0:15:11.86:0,12,119	0/0:40,0:39:6.94:0,7,168	0/1:33,0:33:1.14:1,0,119	0/0:34,0:34:3.93:0,4,112	1/1:19,13:31:17.88:172,18,0	1/1:21,21:40:45.98:440,46,0	1/1:13,3:16:13.56:86,14,0	0/0:25,0:25:6.78:0,7,184	0/1:23,0:19:48:48,0,233	0/1:18,0:18:38.89:39,0,215	0/0:97,0:89:53.82:0,54,503	0/0:16,0:15:8.99:0,9,74	0/1:29,0:26:17.23:17,0,101	0/0:48,0:47:15.21:0,15,146	0/0:26,0:26:17.62:0,18,196	0/0:41,0:36:4:0,4,441	0/1:19,0:19:9.84:10,0,156	0/0:18,0:17:2.59:0,3,10
chr10	43842347	.	GTGTC	G	536.04	PASS	AB=1.000;AC=14;AF=0.250;AN=56;BaseQRankSum=9.907;DP=855;FS=7.631;HRun=0;HaplotypeScore=189.7924;InbreedingCoeff=0.4444;MQ=47.42;MQ0=36;MQRankSum=-5.610;QD=2.27;ReadPosRankSum=0.000;VQSLOD=2.0468;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:23.92:0,24,392	1/1:4,5:8:2.88:39,3,0	0/0:9,0:1:2.98:0,3,21	0/1:20,0:3:7.78:8,0,17	0/0:18,0:18:12.04:0,12,257	0/0:23,0:23:42.36:0,42,1350	0/0:53,0:52:99:0,129,2999	0/0:44,0:37:77.95:0,78,1512	0/0:44,0:43:99:0,126,3022	0/1:40,0:37:34.49:34,0,1382	0/0:17,0:16:6.65:0,7,239	0/0:38,0:37:12.07:0,12,667	0/1:38,0:38:0.50:0,0,476	0/1:32,0:31:16.44:16,0,261	1/1:28,5:32:16.15:164,16,0	1/1:37,5:40:34.09:354,34,0	1/1:12,3:15:10.49:72,10,0	0/0:25,0:25:24.08:0,24,469	0/0:23,0:19:11.31:0,11,675	0/0:15,0:15:27.08:0,27,642	0/0:95,0:88:75.19:0,75,1571	0/0:18,0:17:12.04:0,12,297	0/0:27,0:24:2.59:0,3,321	0/0:46,0:45:23.83:0,24,524	0/0:26,0:26:30.01:0,30,673	0/0:44,0:39:41.75:0,42,1276	0/0:19,0:19:0:0,0,366	1/1:7,0:5:0.89:2,1,0
chr10	43844311	.	T	TC	706.70	PASS	AB=0.983;AC=10;AF=0.179;AN=56;BaseQRankSum=-2.055;DP=407;FS=8.121;HRun=9;HaplotypeScore=71.8716;InbreedingCoeff=0.1836;MQ=80.52;MQ0=0;MQRankSum=-4.099;QD=6.60;ReadPosRankSum=-1.791;VQSLOD=0.6729;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:24:45.65:46,0,82	0/0:6,0:7:8.01:0,8,58	0/0:15,0:14:23.97:0,24,206	0/0:20,0:19:34.65:0,35,270	0/0:10,0:10:2.33:0,2,15	0/0:10,0:10:17.97:0,18,156	0/0:16,0:16:26.97:0,27,234	0/0:12,0:22:6.69:0,7,24	0/0:14,0:14:29.98:0,30,260	0/1:9,0:9:3.74:4,0,47	0/0:5,0:5:4.86:0,5,32	0/0:25,0:25:26:0,26,164	0/0:13,0:13:10.34:0,10,56	0/0:9,0:9:10.51:0,11,56	1/1:2,12:14:13.05:372,13,0	1/1:4,8:12:24.54:267,25,0	0/0:39,1:42:69.80:0,70,802	0/0:20,0:20:14.28:0,14,175	0/0:15,1:16:9.32:0,9,59	0/1:8,1:9:17.91:18,0,20	0/1:22,0:22:55.06:55,0,64	0/1:5,0:5:8.81:20,0,9	0/0:8,0:8:20.08:0,20,104	0/0:14,0:14:2.79:0,3,84	0/0:5,0:5:4.40:0,4,19	0/1:12,0:12:40.50:72,0,41	0/0:22,0:22:32.94:0,33,194	0/0:6,0:6:7.75:0,8,44
chr10	43847968	.	TTGG	T	5967.45	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=9.589;DP=442;FS=0.442;HRun=0;HaplotypeScore=93.3381;InbreedingCoeff=0.9635;MQ=60.79;MQ0=2;MQRankSum=-7.759;QD=25.72;ReadPosRankSum=2.824;VQSLOD=4.9009;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,13:17:24.08:355,24,0	0/0:10,0:10:24.08:0,24,417	0/0:27,0:20:44.18:0,44,802	0/0:23,0:17:26.74:0,27,677	1/1:5,13:18:24.08:348,24,0	0/0:18,0:18:45.15:0,45,905	0/0:18,0:18:36.12:0,36,708	0/0:43,0:42:88.97:0,89,1913	0/0:18,0:18:48.15:0,48,930	1/1:2,13:15:39.13:572,39,0	1/1:7,4:11:21.06:281,21,0	1/1:4,5:9:12.04:177,12,0	1/1:2,4:6:18.06:265,18,0	1/1:6,5:11:9.03:133,9,0	0/0:16,0:16:18.05:0,18,332	0/0:16,0:16:36.09:0,36,579	0/0:20,0:20:12.01:0,12,172	1/1:4,7:11:15.05:220,15,0	1/1:1,14:15:42.11:595,42,0	1/1:8,8:16:33.11:487,33,0	1/1:2,8:10:8.99:108,9,0	1/1:1,7:8:21.07:288,21,0	1/1:8,7:15:30.10:425,30,0	1/1:5,14:19:21.07:305,21,0	1/1:4,11:15:36.12:524,36,0	1/1:7,9:15:21.07:310,21,0	1/1:3,8:11:18.06:263,18,0	1/1:1,8:9:21.07:310,21,0
chr10	43847979	.	GGT	G	660.52	PASS	AB=0.987;AC=26;AF=0.464;AN=56;BaseQRankSum=11.999;DP=413;FS=7.986;HRun=0;HaplotypeScore=97.3731;InbreedingCoeff=0.2885;MQ=54.00;MQ0=7;MQRankSum=-7.070;QD=3.21;ReadPosRankSum=4.476;VQSLOD=1.2123;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:17:17.76:58,18,0	0/0:9,0:9:24.08:0,24,455	0/0:30,0:16:47.97:0,48,815	0/0:30,0:20:46.71:0,47,816	0/1:17,0:17:24.61:25,0,66	0/0:18,0:18:51.17:0,51,963	0/0:13,0:13:39.13:0,39,729	0/0:40,0:39:87.92:0,88,1989	0/0:17,0:17:51.17:0,51,970	0/1:18,0:18:74.53:75,0,80	1/1:7,0:7:12.08:44,12,0	1/1:7,0:7:9.18:29,9,0	1/1:7,0:7:13.90:50,14,0	0/1:6,0:6:11.78:12,0,14	0/0:17,0:17:18.06:0,18,327	0/0:15,0:15:39:0,39,676	0/0:18,0:18:15.05:0,15,232	0/1:9,0:9:17.88:18,0,43	1/1:15,0:14:29.30:103,29,0	1/1:9,2:11:25.65:88,26,0	0/1:9,0:9:4.21:4,0,29	0/1:9,0:9:36.04:59,0,36	0/1:11,1:12:13.37:88,0,13	0/1:16,1:17:28.42:28,0,35	0/1:16,0:15:50.99:51,0,63	1/1:11,0:10:15.54:51,16,0	0/1:10,0:10:20.50:26,0,21	1/1:8,0:8:15.54:51,16,0
chr10	43848000	.	GTTGTTGTTGT	G	4085.73	PASS	AB=0.991;AC=29;AF=0.518;AN=56;BaseQRankSum=9.190;DP=420;FS=24.399;HRun=0;HaplotypeScore=120.0060;InbreedingCoeff=0.0240;MQ=44.62;MQ0=25;MQRankSum=-3.789;QD=14.24;ReadPosRankSum=5.011;VQSLOD=0.7683;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:17,0:16:0.41:180,0,0	1/1:7,0:7:14.97:136,15,0	0/0:21,0:9:12.73:0,13,184	0/0:29,0:19:28.03:0,28,452	0/1:19,0:17:6.46:283,0,6	0/0:19,0:18:39.10:0,39,1543	0/0:13,0:13:13.69:0,14,746	0/0:31,0:25:49.73:0,50,474	0/0:15,0:15:37.37:0,37,948	0/1:18,0:19:14.75:373,0,15	0/1:13,0:13:11.22:89,0,11	0/1:7,0:7:6.40:92,0,6	1/1:7,0:7:0.65:278,1,0	0/0:4,0:4:2.89:0,3,16	1/1:5,17:22:1.92:95,2,0	0/1:14,0:14:71.65:421,0,72	0/1:20,0:19:98.17:109,0,98	0/1:6,0:6:3.74:31,0,4	0/1:27,0:18:49.21:342,0,49	0/1:7,0:7:14.52:152,0,15	1/1:5,0:5:2.48:61,2,0	1/1:10,0:9:4.11:319,4,0	0/1:13,0:12:14.20:281,0,14	1/1:17,0:17:24.61:310,25,0	0/1:20,0:18:70.06:255,0,70	0/1:17,0:15:6.41:98,0,6	1/1:12,0:12:8.96:101,9,0	1/1:7,0:7:11.14:81,11,0
chr10	43848002	.	TGTTGTTG	T	5584.28	PASS	AB=0.983;AC=39;AF=0.696;AN=56;BaseQRankSum=4.876;DP=403;FS=7.979;HRun=0;HaplotypeScore=92.4185;InbreedingCoeff=0.6116;MQ=43.85;MQ0=23;MQRankSum=-7.090;QD=19.94;ReadPosRankSum=-1.021;VQSLOD=2.7827;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,2:16:19.49:269,19,0	1/1:7,0:7:14.97:136,15,0	0/0:17,0:7:13.48:0,13,196	0/0:30,0:18:35.81:0,36,473	1/1:15,4:17:28.33:430,28,0	0/0:18,0:17:42.88:0,43,1266	0/0:12,0:12:8.19:0,8,636	0/0:28,0:23:4.10:0,4,333	0/0:15,0:15:37.10:0,37,853	1/1:17,2:19:36.59:572,37,0	1/1:14,1:14:20.87:217,21,0	1/1:5,2:7:5.92:116,6,0	1/1:4,2:7:15.05:296,15,0	0/0:3,0:3:2.37:0,2,8	1/1:21,0:21:3.87:71,4,0	0/1:13,0:12:55.76:408,0,56	0/1:20,0:19:46.36:46,0,92	1/1:4,0:5:11.62:115,12,0	1/1:25,6:22:22.32:483,22,0	1/1:5,2:7:18.67:268,19,0	1/1:5,0:5:8.95:77,9,0	1/1:4,6:9:21.41:371,21,0	1/1:6,7:12:18.49:341,18,0	1/1:13,2:15:24.92:342,25,0	0/1:18,1:17:8.22:458,0,8	1/1:11,4:14:13.71:236,14,0	1/1:9,0:9:14.93:177,15,0	1/1:6,0:6:13.56:153,14,0
chr10	43848003	.	GTTGTTGTTTT	G	1973.83	PASS	AB=0.976;AC=22;AF=0.393;AN=56;BaseQRankSum=10.102;DP=419;FS=37.557;HRun=0;HaplotypeScore=125.2112;InbreedingCoeff=-0.3337;MQ=43.27;MQ0=22;MQRankSum=-2.091;QD=6.88;ReadPosRankSum=6.945;VQSLOD=0.0536;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:21,0:20:66.86:67,0,87	1/1:7,0:7:14.89:248,15,0	0/0:16,0:7:13.55:0,14,126	0/0:30,0:18:34.38:0,34,418	0/1:19,0:17:99:140,0,100	0/0:19,0:18:47.97:0,48,1595	0/0:12,0:12:19.07:0,19,718	0/0:28,0:23:32.87:0,33,330	0/0:15,0:15:41.95:0,42,814	0/1:20,0:20:99:147,0,227	0/1:18,0:17:26.09:26,0,202	0/1:9,0:9:47.82:48,0,62	0/1:8,0:8:56.43:169,0,56	0/0:4,0:4:7.79:0,8,61	0/1:21,0:21:48.20:64,0,48	0/1:14,0:13:99:239,0,111	0/1:5,14:18:66.48:155,0,66	0/0:7,0:7:14.11:0,14,132	0/1:31,0:23:99:153,0,390	0/1:6,0:7:74.13:74,0,83	0/1:5,0:5:25.23:25,0,38	0/1:13,0:12:83.02:181,0,83	0/1:13,0:12:66.85:158,0,67	1/1:15,0:15:17.33:145,17,0	0/1:20,0:18:66.01:66,0,210	0/1:15,0:14:11.28:11,0,97	0/1:8,0:8:24.82:25,0,33	0/1:4,0:4:0.10:0,0,16
chr10	43848005	.	TG	T	1376.76	PASS	AB=0.997;AC=27;AF=0.482;AN=56;BaseQRankSum=8.741;DP=425;FS=1.085;HRun=1;HaplotypeScore=79.8269;InbreedingCoeff=0.1141;MQ=42.72;MQ0=21;MQRankSum=-4.143;QD=5.23;ReadPosRankSum=0.333;VQSLOD=0.3801;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:19:13.72:117,14,0	0/1:7,0:7:12.71:113,0,13	0/0:17,0:7:14.91:0,15,171	0/0:30,1:17:26.44:0,26,363	1/1:20,0:18:11.10:147,11,0	0/0:18,0:17:44.89:0,45,699	0/0:12,0:12:11.80:0,12,364	0/0:24,0:20:20.86:0,21,272	0/0:15,0:15:38.96:0,39,499	0/1:20,0:20:26.28:121,0,26	1/1:17,2:18:10.96:75,11,0	0/1:9,0:9:18.96:30,0,19	1/1:8,0:8:5.47:55,5,0	0/0:4,0:4:2.84:0,3,8	0/0:21,0:21:5.44:0,5,86	0/1:15,0:14:66.47:100,0,66	0/0:19,0:18:8.22:0,8,153	1/1:6,0:6:4.08:54,4,0	0/1:31,1:23:84.03:84,0,90	1/1:7,0:7:14.80:101,15,0	0/1:5,0:5:8.69:9,0,20	0/1:13,0:12:9.47:111,0,9	0/1:13,0:12:43.36:83,0,43	0/1:14,0:14:18.27:60,0,18	0/1:22,0:20:35.04:177,0,35	0/1:19,0:18:2.72:59,0,3	1/1:10,0:10:5.76:40,6,0	1/1:4,0:4:2.71:20,3,0
chr10	43848147	.	ACCT	A	8968.26	PASS	AB=1.000;AC=46;AF=0.821;AN=56;BaseQRankSum=3.091;DP=464;FS=1.079;HRun=0;HaplotypeScore=148.6851;InbreedingCoeff=0.6419;MQ=48.14;MQ0=5;MQRankSum=-8.284;QD=22.48;ReadPosRankSum=0.211;VQSLOD=4.9418;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:16,17:33:56.11:657,56,0	1/1:3,5:8:10.99:180,11,0	0/0:16,0:5:13.34:0,13,73	0/0:14,0:7:4.77:0,5,65	1/1:5,13:18:32.86:429,33,0	0/0:20,0:20:4.17:0,4,549	0/1:23,0:23:79.84:80,0,581	0/1:18,0:16:4.98:5,0,318	0/0:15,0:15:17.11:0,17,447	1/1:0,19:19:54.58:760,55,0	1/1:4,3:7:5.47:67,5,0	1/1:2,11:13:24.08:365,24,0	1/1:1,15:16:24.08:359,24,0	1/1:4,8:12:20.60:347,21,0	1/1:6,14:19:32.73:472,33,0	1/1:5,14:20:5.23:567,5,0	1/1:1,15:16:15.05:228,15,0	1/1:7,9:16:31.19:419,31,0	1/1:10,5:15:34.72:361,35,0	1/1:4,11:15:29.60:416,30,0	1/1:17,8:25:15.25:146,15,0	1/1:3,15:18:50.04:751,50,0	1/1:4,9:13:29.86:367,30,0	1/1:13,11:24:40.34:455,40,0	1/1:6,7:13:31.63:408,32,0	1/1:5,14:19:49.53:698,50,0	1/1:0,11:11:15.05:230,15,0	1/1:3,4:7:15.34:202,15,0
chr10	43848148	.	CCT	C	678.81	PASS	AB=0.984;AC=24;AF=0.429;AN=56;BaseQRankSum=14.869;DP=461;FS=2.355;HRun=0;HaplotypeScore=170.0106;InbreedingCoeff=-0.2335;MQ=48.21;MQ0=5;MQRankSum=-11.335;QD=2.10;ReadPosRankSum=6.456;VQSLOD=2.2389;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:33:32.56:33,0,205	0/1:8,0:8:17.54:18,0,54	0/0:14,0:5:13.55:0,14,132	0/0:14,0:7:14.96:0,15,130	0/1:18,0:18:16.04:38,0,16	0/0:20,0:20:56.64:0,57,614	0/0:24,0:24:55.72:0,56,661	0/0:18,0:16:47.94:0,48,506	0/0:16,0:16:47.83:0,48,511	0/1:19,0:19:27.17:87,0,27	0/0:7,0:7:3.13:0,3,77	1/1:12,0:12:19.34:68,19,0	1/1:15,0:15:18.67:62,19,0	0/1:12,0:12:19.83:20,0,108	0/1:20,0:19:33.70:34,0,133	0/1:19,0:19:55.83:56,0,74	0/1:16,0:16:18.89:28,0,19	0/1:15,1:16:69.05:69,0,125	0/1:15,0:15:6.77:7,0,156	0/1:14,1:15:23.29:39,0,23	0/0:25,0:25:6.06:0,6,131	1/1:17,1:18:0.12:90,0,0	0/1:11,2:13:27.67:28,0,63	0/1:24,0:24:18.95:19,0,81	0/1:13,0:13:31.26:31,0,59	0/1:19,0:19:46.64:64,0,47	1/1:11,0:11:12.21:44,12,0	0/1:7,0:7:15.76:16,0,67
chr10	43849007	.	CT	C	1446.93	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=4.498;DP=542;FS=5.052;HRun=2;HaplotypeScore=70.9489;InbreedingCoeff=0.9967;MQ=78.77;MQ0=0;MQRankSum=-2.547;QD=38.08;ReadPosRankSum=1.106;VQSLOD=4.3362;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:54.18:0,54,858	0/0:13,0:13:39.09:0,39,586	0/0:32,0:32:96.31:0,96,1497	0/0:26,0:26:62.59:0,63,1080	0/0:17,0:17:45.15:0,45,714	0/0:15,0:15:39.13:0,39,624	0/0:16,0:16:48.14:0,48,719	0/0:28,0:28:84.24:0,84,1282	0/0:10,0:10:30.10:0,30,480	0/0:19,0:19:57.18:0,57,888	0/0:12,0:12:30.10:0,30,479	0/0:15,0:15:45.15:0,45,719	0/0:19,0:19:57.19:0,57,886	0/0:16,0:16:39.13:0,39,622	1/1:0,15:15:45.15:617,45,0	1/1:0,23:23:69.23:952,69,0	0/0:29,0:29:84.29:0,84,1338	0/0:27,0:27:81.28:0,81,1295	0/0:18,0:18:54.18:0,54,849	0/0:20,0:20:51.17:0,51,814	0/0:29,0:29:78.27:0,78,1237	0/0:9,0:9:21.07:0,21,313	0/0:17,0:17:48.16:0,48,754	0/0:24,0:24:60.68:0,61,959	0/0:20,0:20:51.17:0,51,792	0/0:25,0:25:75.26:0,75,1185	0/0:18,0:18:54.18:0,54,861	0/0:9,0:9:27.09:0,27,431
chr10	43849100	.	GTA	G	5019.47	PASS	AB=0.978;AC=42;AF=0.750;AN=56;BaseQRankSum=-3.943;DP=585;FS=15.918;HRun=0;HaplotypeScore=90.1911;InbreedingCoeff=-0.0975;MQ=51.44;MQ0=19;MQRankSum=-0.055;QD=8.92;ReadPosRankSum=-5.094;VQSLOD=1.8407;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:33,0:33:44.21:350,44,0	1/1:8,0:8:17.98:150,18,0	0/1:26,0:9:21.13:21,0,50	0/1:42,0:16:54.29:54,0,126	1/1:10,0:10:8.96:67,9,0	0/1:23,1:24:9.17:9,0,552	0/0:22,0:22:43.41:0,43,518	1/1:22,0:22:62.61:479,63,0	0/1:21,0:21:5.81:6,0,359	1/1:17,0:16:23.44:328,23,0	0/1:7,0:7:7.17:62,0,7	1/1:1,14:14:9.02:114,9,0	1/1:9,2:11:20.85:160,21,0	0/1:10,1:10:12.03:101,0,12	0/1:19,0:19:1.08:119,0,1	1/1:18,0:17:15.46:115,15,0	1/1:26,0:25:48.46:353,48,0	0/1:31,1:32:67.51:393,0,68	1/1:8,0:7:20.70:157,21,0	0/1:13,0:12:26.83:103,0,27	0/1:64,1:64:10.47:742,0,10	1/1:22,1:22:2.95:24,3,0	1/1:11,1:12:19.21:186,19,0	1/1:2,38:40:12.04:182,12,0	0/1:23,1:24:40.84:270,0,41	1/1:18,1:19:28.61:330,29,0	0/1:9,0:8:71.36:79,0,71	1/1:5,0:4:9.42:68,9,0
chr10	43849740	.	GAAAACA	G	758.93	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-2.483;DP=747;FS=3.470;HRun=0;HaplotypeScore=202.2242;InbreedingCoeff=0.9978;MQ=71.14;MQ0=1;MQRankSum=-2.608;QD=23.72;ReadPosRankSum=-4.010;VQSLOD=2.9272;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,102,3140	0/0:11,0:11:27.09:0,27,892	0/0:33,0:25:30.68:0,31,941	0/0:25,0:23:32.96:0,33,722	0/0:24,0:24:60.21:0,60,1939	0/0:38,0:38:90.31:0,90,2907	0/0:22,0:22:54.17:0,54,1666	1/1:15,16:32:44.27:854,44,0	0/0:31,0:31:69.22:0,69,2087	0/0:31,0:31:75.26:0,75,2378	0/0:17,0:17:42.13:0,42,1215	0/0:28,0:28:63.22:0,63,2013	0/0:18,0:18:36.12:0,36,1133	0/0:25,0:25:57.15:0,57,1723	0/0:31,0:31:72.25:0,72,1860	0/0:23,0:23:54.18:0,54,1335	0/0:35,0:35:81.28:0,81,2582	0/0:19,0:19:45.15:0,45,1448	0/0:29,0:29:57.19:0,57,1668	0/0:25,0:25:48.16:0,48,1566	0/0:23,0:23:51.16:0,51,1547	0/0:27,0:27:57.18:0,57,1713	0/0:21,0:21:42.14:0,42,1330	0/0:29,0:29:66.04:0,66,1916	0/0:23,0:23:69.24:0,69,2166	0/0:34,0:34:69.10:0,69,2050	0/0:33,0:33:84.29:0,84,2661	0/0:16,0:16:33.01:0,33,984
chr10	43850036	.	C	CCTATAGTCTTACT	2921	PASS	AB=0.636;AC=3;AF=0.054;AN=56;BaseQRankSum=-2.662;DP=585;FS=4.161;HRun=0;HaplotypeScore=255.0724;InbreedingCoeff=0.6428;MQ=58.98;MQ0=0;MQRankSum=-7.867;QD=116.84;ReadPosRankSum=-0.561;VQSLOD=3.4524;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:79.50:0,79,2639	1/1:6,4:11:30.10:1478,30,0	0/0:24,0:22:60.18:0,60,1855	0/0:22,0:22:57.18:0,57,1591	0/0:16,0:16:36.11:0,36,1230	0/0:14,0:14:39.13:0,39,1334	0/0:20,0:20:54.19:0,54,2054	0/0:25,0:25:66.23:0,66,2474	0/0:25,0:25:72.23:0,72,2644	0/0:18,0:18:39.13:0,39,1152	0/0:10,0:10:17.98:0,18,346	0/0:21,0:21:60.21:0,60,2125	0/0:24,0:24:72.25:0,72,2763	0/0:21,0:21:51.17:0,51,2037	0/0:41,0:41:99:0,123,4636	0/0:25,0:25:72.23:0,72,2661	0/1:6,8:14:56.98:1549,0,57	0/0:15,0:15:45.13:0,45,1618	0/0:15,0:15:42.14:0,42,1419	0/0:17,0:17:39.12:0,39,1406	0/0:34,0:34:98.74:0,99,3554	0/0:11,0:11:33.10:0,33,920	0/0:10,0:10:30.05:0,30,674	0/0:31,0:31:90.31:0,90,3394	0/0:21,0:21:54.14:0,54,1728	0/0:25,0:25:66.20:0,66,2322	0/0:32,0:32:90.29:0,90,3232	0/0:10,0:10:30.10:0,30,1123
chr10	43852691	.	T	TC	19194.83	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=9.472;DP=671;FS=4.856;HRun=1;HaplotypeScore=106.8430;InbreedingCoeff=0.9962;MQ=88.30;MQ0=0;MQRankSum=-7.651;QD=35.81;ReadPosRankSum=5.334;VQSLOD=4.5717;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,30:31:84.27:1092,84,0	1/1:0,10:10:30.10:383,30,0	0/0:26,0:26:75.20:0,75,933	0/0:25,0:25:74.97:0,75,887	1/1:0,35:35:93.30:1230,93,0	0/0:32,0:32:90.29:0,90,1168	0/0:30,0:30:81.26:0,81,1052	1/1:2,40:42:99:1837,123,0	0/0:21,1:22:16.57:0,17,696	1/1:1,38:39:99:1446,111,0	1/1:2,15:17:41.29:591,41,0	1/1:1,17:18:54.16:692,54,0	1/1:1,24:26:72.23:930,72,0	1/1:0,17:17:48.16:642,48,0	1/1:1,30:31:72.13:999,72,0	1/1:2,24:26:66.22:890,66,0	1/1:0,31:31:93.30:1249,93,0	1/1:5,11:16:21.82:349,22,0	1/1:3,19:22:60.19:801,60,0	1/1:2,25:27:72.13:963,72,0	1/1:1,18:19:45.14:581,45,0	1/1:3,12:15:30.74:415,31,0	1/1:0,29:29:74.83:1001,75,0	1/1:0,18:18:50.37:628,50,0	1/1:0,12:12:30.10:379,30,0	1/1:0,20:20:60.17:774,60,0	1/1:2,19:21:60.17:755,60,0	1/1:0,14:14:42.14:567,42,0
chr10	43853919	.	TGG	T	8919.38	PASS	AB=0.938;AC=31;AF=0.554;AN=56;BaseQRankSum=1.497;DP=662;FS=8.781;HRun=11;HaplotypeScore=93.5739;InbreedingCoeff=0.8908;MQ=72.72;MQ0=1;MQRankSum=-1.460;QD=22.81;ReadPosRankSum=7.785;VQSLOD=3.5133;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,29:31:75.18:798,75,0	1/1:1,12:13:30.07:319,30,0	0/0:25,1:26:9.94:0,10,538	0/0:20,0:16:27.56:0,28,287	1/1:4,28:32:72.10:755,72,0	0/0:21,0:25:46.03:0,46,496	0/0:19,0:21:44.12:0,44,616	1/1:11,11:22:32.81:373,33,0	0/0:16,0:16:24.08:0,24,367	1/1:3,27:30:81.20:862,81,0	1/1:5,19:24:48.09:507,48,0	0/0:12,0:21:11.98:0,12,120	0/0:13,0:20:17.98:0,18,174	0/1:13,1:15:13.88:14,0,164	0/0:24,0:28:52.60:0,53,655	0/0:32,0:34:89.22:0,89,1260	1/1:5,18:22:45.10:479,45,0	1/1:2,17:19:45.07:467,45,0	1/1:4,13:18:38.51:366,39,0	1/1:5,34:39:81.09:854,81,0	1/1:3,22:25:63.15:671,63,0	0/0:15,0:20:2.53:0,3,26	0/0:15,0:19:21.02:0,21,258	0/0:12,0:20:33.47:0,33,336	1/1:8,17:26:59.87:615,60,0	1/1:6,22:29:66.07:690,66,0	1/1:5,31:36:84.20:894,84,0	1/1:0,8:8:24.06:255,24,0
chr10	43854853	.	T	TCTC	1928.27	PASS	AB=0.970;AC=13;AF=0.232;AN=56;BaseQRankSum=7.140;DP=679;FS=29.804;HRun=0;HaplotypeScore=192.0048;InbreedingCoeff=0.2010;MQ=56.66;MQ0=50;MQRankSum=-2.664;QD=9.23;ReadPosRankSum=1.671;VQSLOD=1.4867;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:21,0:19:15.24:15,0,108	0/1:18,0:14:7.99:8,0,78	0/0:44,0:17:30.34:0,30,347	0/0:60,0:22:49.15:0,49,516	0/0:27,0:27:1.28:0,1,151	0/0:32,0:32:69.20:0,69,925	0/0:16,0:14:30.09:0,30,388	0/0:36,0:34:38.02:0,38,802	0/0:16,0:16:48.12:0,48,608	0/0:29,0:29:82.55:0,83,928	0/0:24,0:23:34.72:0,35,414	1/1:16,13:26:0.15:364,0,0	0/1:14,4:16:42.60:220,0,43	1/1:19,0:15:18.03:464,18,0	0/1:21,0:17:33.72:34,0,49	0/1:14,0:9:47.03:138,0,47	0/1:14,0:12:6.71:170,0,7	0/0:8,0:8:24.08:0,24,305	0/0:12,0:12:27.72:0,28,264	0/0:37,0:36:43.79:0,44,661	0/0:13,0:13:6.02:0,6,76	1/1:22,0:21:15.01:283,15,0	0/1:30,1:27:28.13:391,0,28	0/0:9,0:7:3.01:0,3,31	0/0:29,0:27:33.17:0,33,507	0/0:33,0:31:36.60:0,37,891	0/0:29,0:28:50.16:0,50,737	0/0:15,0:15:39.60:0,40,496
chr10	43854888	.	C	CTG	594.66	PASS	AB=0.921;AC=13;AF=0.232;AN=56;BaseQRankSum=7.890;DP=547;FS=51.435;HRun=0;HaplotypeScore=181.3008;InbreedingCoeff=-0.1392;MQ=49.50;MQ0=23;MQRankSum=-6.180;QD=2.42;ReadPosRankSum=2.563;VQSLOD=0.9589;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:24:5.03:5,0,61	0/0:13,0:11:3.70:0,4,22	0/0:15,0:8:17.94:0,18,183	0/0:17,0:8:11.18:0,11,158	0/0:34,0:34:15.24:0,15,117	0/0:27,0:27:50.95:0,51,538	0/0:18,0:16:35.99:0,36,340	0/0:33,0:31:72.31:0,72,667	0/0:10,0:10:26.45:0,26,264	0/0:21,0:21:35.17:0,35,351	0/1:21,0:20:23.97:24,0,82	0/1:23,7:30:35.76:150,0,36	0/1:18,0:19:38.91:62,0,39	0/1:10,6:16:10.34:139,0,10	0/1:22,1:22:1.39:1,0,36	0/1:14,0:12:12.51:28,0,13	0/0:15,0:14:3.57:0,4,97	0/0:8,0:8:5.51:0,6,82	0/0:9,0:9:21.65:0,22,181	0/0:25,0:24:19.48:0,19,152	0/0:16,0:16:6.46:0,6,50	1/1:16,5:20:0.91:75,1,0	0/1:15,7:21:42.95:131,0,43	0/0:10,0:8:0:0,0,0	0/1:28,1:27:42.93:54,0,43	0/0:30,0:27:25.79:0,26,399	0/1:18,0:17:56.74:57,0,163	0/1:6,0:5:7.54:8,0,40
chr10	43854895	.	T	TCA	3017.36	PASS	AB=0.966;AC=39;AF=0.696;AN=56;BaseQRankSum=8.252;DP=487;FS=10.341;HRun=0;HaplotypeScore=159.9800;InbreedingCoeff=0.5976;MQ=55.28;MQ0=8;MQRankSum=-3.365;QD=8.20;ReadPosRankSum=0.451;VQSLOD=2.9235;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:22:9.06:94,9,0	1/1:11,0:11:20.62:176,21,0	0/0:16,0:9:27:0,27,258	0/0:18,0:13:22.37:0,22,296	0/1:28,0:29:2.55:61,0,3	0/0:22,0:22:47.90:0,48,525	0/0:16,0:15:36:0,36,345	0/0:39,0:38:30.71:0,31,230	0/0:8,0:8:19.79:0,20,220	0/1:15,0:16:6.93:7,0,66	1/1:17,0:17:20.43:110,20,0	1/1:19,6:25:56.74:545,57,0	1/1:19,0:19:19.80:199,20,0	1/1:13,3:16:34.67:345,35,0	1/1:18,1:19:26.99:254,27,0	1/1:13,0:13:26.89:232,27,0	1/1:10,0:12:28.81:205,29,0	1/1:8,0:8:5.81:28,6,0	0/1:8,0:8:2.85:3,0,45	1/1:21,0:22:31.72:160,32,0	1/1:13,0:13:7.92:39,8,0	1/1:17,2:20:23.96:222,24,0	1/1:18,3:21:37.40:333,37,0	1/1:10,0:9:5.87:48,6,0	1/1:21,0:20:11.13:55,11,0	0/1:22,0:22:34.32:36,0,34	0/1:18,0:17:3.98:51,0,4	1/1:2,0:2:2.80:7,3,0
chr10	43854897	.	A	ATG	9455.48	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=1.930;DP=502;FS=2.642;HRun=0;HaplotypeScore=138.7803;InbreedingCoeff=0.9366;MQ=55.92;MQ0=7;MQRankSum=-4.218;QD=22.35;ReadPosRankSum=-0.179;VQSLOD=5.4124;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,16:20:24:359,24,0	1/1:12,0:12:23.76:193,24,0	0/0:16,0:9:27.08:0,27,338	0/0:19,0:14:24.44:0,24,451	1/1:12,18:30:33.10:529,33,0	0/0:21,0:21:29.64:0,30,311	0/0:15,0:14:34.35:0,34,428	1/1:10,32:41:90.23:1455,90,0	0/0:8,0:8:23.74:0,24,249	1/1:7,12:19:42.57:630,43,0	1/1:6,13:19:30.10:490,30,0	1/1:25,0:25:59.79:565,60,0	1/1:19,0:19:29.50:212,29,0	1/1:16,0:16:32.91:348,33,0	1/1:19,0:19:27:275,27,0	1/1:14,0:14:32.87:282,33,0	1/1:13,0:13:29.70:230,30,0	1/1:1,8:9:18.06:304,18,0	1/1:2,5:7:15.05:255,15,0	1/1:3,19:22:48.16:797,48,0	1/1:3,12:16:18.06:295,18,0	1/1:19,0:19:23.91:219,24,0	1/1:22,0:22:35.58:352,36,0	1/1:10,0:9:5.91:51,6,0	1/1:6,13:19:14.99:251,15,0	1/1:9,15:24:18.33:796,18,0	1/1:6,13:20:29.96:468,30,0	1/1:2,0:2:6.02:102,6,0
chr10	43855333	.	CACAAACAA	C	20176.32	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=13.418;DP=586;FS=22.996;HRun=0;HaplotypeScore=178.5986;InbreedingCoeff=0.9575;MQ=68.16;MQ0=0;MQRankSum=-13.461;QD=44.05;ReadPosRankSum=4.511;VQSLOD=2.6609;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,22:30:37.35:998,37,0	1/1:3,10:13:21.07:552,21,0	0/0:29,0:28:57.20:0,57,2041	0/0:30,0:31:57.09:0,57,2084	1/1:6,24:30:72.25:1892,72,0	0/0:21,0:21:48.16:0,48,1956	0/0:17,0:17:45.15:0,45,1657	1/1:16,15:27:24.05:488,24,0	0/0:30,0:30:66.23:0,66,2727	1/1:4,14:17:39.13:987,39,0	1/1:4,13:15:30.10:788,30,0	1/1:3,14:17:33.11:867,33,0	1/1:3,15:19:42.14:1104,42,0	1/1:5,11:16:24.08:631,24,0	1/1:8,22:30:63.15:1655,63,0	1/1:8,25:33:57.07:1497,57,0	1/1:1,16:17:27.09:709,27,0	1/1:6,6:12:12.04:315,12,0	1/1:3,7:10:15.05:394,15,0	1/1:5,12:16:27.09:685,27,0	1/1:6,12:18:15.05:370,15,0	1/1:9,25:33:62.02:1653,62,0	1/1:2,15:16:36.12:946,36,0	1/1:2,12:14:18.06:447,18,0	1/1:3,12:14:27.09:709,27,0	1/1:8,21:28:54.18:1385,54,0	1/1:3,14:17:36.12:946,36,0	1/1:0,4:4:6.02:158,6,0
chr10	43857553	.	GCACAGA	G	6690.03	PASS	AB=0.565;AC=39;AF=0.750;AN=52;BaseQRankSum=8.720;DP=658;FS=16.236;HRun=0;HaplotypeScore=199.9640;InbreedingCoeff=0.7016;MQ=65.71;MQ0=4;MQRankSum=-4.598;QD=14.97;ReadPosRankSum=3.279;VQSLOD=3.1842;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:9,25:34:0:0,0,0	1/1:4,4:7:6.01:88,6,0	0/0:41,0:36:60.13:0,60,1140	0/0:45,0:38:43.12:0,43,1231	./.	0/0:21,0:21:54.17:0,54,1655	0/0:33,0:32:65.98:0,66,1766	1/1:9,13:22:42.14:786,42,0	0/0:27,0:27:63.20:0,63,1849	1/1:12,20:30:57.02:1003,57,0	1/1:6,14:20:6.02:98,6,0	1/1:13,12:24:18.05:316,18,0	1/1:7,11:18:18.06:341,18,0	1/1:4,15:19:0.73:1,1,0	1/1:14,21:35:29.84:467,30,0	0/1:5,20:25:86.57:178,0,87	1/1:8,10:18:29.84:540,30,0	1/1:3,10:13:9.03:192,9,0	1/1:5,13:18:36.09:621,36,0	1/1:3,14:17:3.01:52,3,0	./.	1/1:6,8:14:9.03:176,9,0	1/1:13,4:17:18.03:272,18,0	1/1:14,11:25:11.99:119,12,0	0/1:6,21:26:0.14:0,0,0	1/1:9,17:26:48.13:932,48,0	1/1:7,15:21:12.04:256,12,0	1/1:6,6:12:12.04:250,12,0
chr10	43857580	.	CACAG	C	746.57	PASS	AB=0.794;AC=16;AF=0.296;AN=54;BaseQRankSum=5.558;DP=617;FS=11.842;HRun=0;HaplotypeScore=201.3154;InbreedingCoeff=0.6694;MQ=50.83;MQ0=7;MQRankSum=-2.036;QD=4.91;ReadPosRankSum=1.220;VQSLOD=1.8099;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:2.74:0,3,75	1/1:2,5:6:2.98:21,3,0	0/0:51,0:33:62.86:0,63,1225	0/0:51,0:36:46.77:0,47,979	0/0:14,0:13:3.01:0,3,75	0/0:20,0:19:51.18:0,51,1244	0/0:28,0:27:72.04:0,72,1727	0/0:28,0:28:50.99:0,51,1082	0/0:26,0:26:66.23:0,66,1553	0/0:28,0:26:41.36:0,41,630	0/0:16,0:16:5.81:0,6,89	1/1:6,13:18:11.40:154,11,0	1/1:5,7:12:15.05:243,15,0	1/1:5,11:16:0.73:1,1,0	1/1:5,26:31:2.80:48,3,0	0/0:11,14:25:3.01:0,3,76	1/1:4,14:18:20.65:352,21,0	0/0:14,0:14:22.64:0,23,336	0/0:19,0:19:38.76:0,39,545	0/0:16,0:16:3.01:0,3,75	0/0:25,0:25:9.01:0,9,226	./.	1/1:4,7:11:6.02:81,6,0	0/1:6,14:20:0:0,0,0	0/1:18,0:17:0.13:0,0,0	0/0:24,0:24:51.63:0,52,542	0/0:21,0:20:23.83:0,24,241	0/0:8,0:8:14.72:0,15,129
chr10	43857608	.	GACACACACACACACACACACAC	G	2218.20	PASS	AB=0.826;AC=27;AF=0.587;AN=46;BaseQRankSum=3.193;DP=512;FS=15.789;HRun=0;HaplotypeScore=230.8158;InbreedingCoeff=0.2702;MQ=41.68;MQ0=30;MQRankSum=-3.125;QD=8.98;ReadPosRankSum=0.656;VQSLOD=1.0059;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:16:3.01:75,3,0	./.	0/0:43,0:18:10.74:0,11,207	0/0:51,0:22:15.38:0,15,177	1/1:10,1:9:3.01:48,3,0	0/0:19,0:18:34.41:0,34,1927	0/0:24,0:23:27.08:0,27,1262	0/0:19,0:18:15.05:0,15,498	0/0:21,0:21:36.11:0,36,2002	1/1:13,1:12:2.96:173,3,0	1/1:8,1:10:3.01:50,3,0	1/1:19,0:20:14.84:336,15,0	1/1:7,0:8:3.01:92,3,0	1/1:16,0:14:3.48:109,3,0	1/1:21,0:25:0.47:1,0,0	0/1:13,0:18:89.66:90,0,218	0/0:14,0:15:0.89:0,1,2	0/1:10,0:9:9.56:167,0,10	0/1:16,1:17:34.63:169,0,35	1/1:10,0:12:3.44:26,3,0	./.	./.	1/1:15,0:16:3:27,3,0	./.	./.	0/1:13,3:17:2.95:556,0,3	0/1:14,4:19:36.23:279,0,36	1/1:9,1:9:2.87:168,3,0
chr10	43857632	.	CACACACACACACACACACACAGAG	C	2502.86	PASS	AB=0.967;AC=22;AF=0.407;AN=54;BaseQRankSum=2.023;DP=414;FS=2.798;HRun=0;HaplotypeScore=169.3084;InbreedingCoeff=0.0553;MQ=35.27;MQ0=42;MQRankSum=-3.601;QD=10.79;ReadPosRankSum=2.402;VQSLOD=2.5487;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:8,0:8:32.19:43,0,32	0/0:8,0:8:6.02:0,6,193	0/0:14,0:3:6.02:0,6,137	0/0:18,0:2:3.48:0,3,43	1/1:8,0:6:2.99:24,3,0	0/0:23,0:22:39.86:0,40,1851	0/0:20,0:19:34.01:0,34,1282	0/0:18,0:16:45.04:0,45,1041	0/0:25,0:22:42.06:0,42,2143	0/1:16,0:13:99:114,0,819	0/1:8,0:8:19.39:19,0,65	1/1:22,1:22:23.76:618,24,0	1/1:11,0:10:15.01:392,15,0	1/1:18,0:16:1.65:157,2,0	0/0:9,0:8:2.98:0,3,75	0/1:22,0:21:57.23:57,0,466	0/0:13,0:10:15.05:0,15,348	0/1:7,0:4:99:144,0,120	0/1:10,0:9:99:160,0,146	0/0:9,0:7:2.26:0,2,35	./.	0/1:12,12:22:0:0,0,0	1/1:8,11:18:3.01:76,3,0	1/1:18,0:14:3.01:69,3,0	0/0:11,0:10:8.96:0,9,174	0/1:20,0:17:99:478,0,359	0/1:13,0:12:99:160,0,500	0/1:7,0:5:25.91:151,0,26
chr10	43857652	.	CAG	C	260.96	PASS	AB=1.000;AC=11;AF=0.212;AN=52;BaseQRankSum=0.159;DP=439;FS=0.000;HRun=0;HaplotypeScore=120.0648;InbreedingCoeff=0.5565;MQ=38.41;MQ0=34;MQRankSum=-0.643;QD=2.46;ReadPosRankSum=1.099;VQSLOD=2.3577;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:5.94:0,6,42	0/0:7,0:7:8.99:0,9,74	0/0:1,0:1:2.84:0,3,14	./.	0/0:8,0:7:2.99:0,3,24	0/0:23,0:22:12.88:0,13,102	0/0:20,0:19:23.88:0,24,188	./.	0/1:22,0:19:6.54:7,0,125	0/0:22,0:19:53.71:0,54,417	0/0:11,0:11:5.99:0,6,50	1/1:15,1:18:20.65:145,21,0	1/1:15,0:14:29.61:199,30,0	1/1:4,0:11:3.03:15,3,0	0/0:20,0:19:14.93:0,15,125	0/0:26,0:25:23.57:0,24,192	0/0:16,0:13:26.68:0,27,190	0/0:12,0:9:19.10:0,19,132	0/0:12,0:10:11.93:0,12,91	0/0:18,0:17:8.48:0,8,67	0/0:15,0:9:2.98:0,3,21	0/0:19,0:18:0:0,0,0	1/1:16,0:16:2.92:17,3,0	1/1:8,13:17:2.98:21,3,0	0/0:18,0:17:17.98:0,18,151	0/0:27,0:24:44.55:0,45,334	0/0:18,0:17:39.29:0,39,279	0/0:7,0:5:2.96:0,3,19
chr10	43858356	.	C	CT	21718.50	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=11.448;DP=721;FS=0.768;HRun=3;HaplotypeScore=113.3745;InbreedingCoeff=0.9992;MQ=89.96;MQ0=0;MQRankSum=-8.166;QD=36.81;ReadPosRankSum=5.546;VQSLOD=3.9613;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,41:43:99:1553,111,0	1/1:0,8:8:24.08:336,24,0	0/0:31,0:31:84.23:0,84,987	0/0:25,0:25:56.30:0,56,675	1/1:1,22:23:56.99:707,57,0	0/0:24,0:23:66.16:0,66,756	0/0:31,0:31:84.23:0,84,986	1/1:2,32:34:96.29:1294,96,0	0/0:20,0:20:57.16:0,57,672	1/1:0,23:23:69.21:943,69,0	1/1:0,14:14:33.11:462,33,0	1/1:2,32:34:90.27:1238,90,0	1/1:1,25:26:75.22:1022,75,0	1/1:4,20:24:60.20:840,60,0	1/1:1,31:32:90.30:1260,90,0	1/1:2,21:23:57.19:798,57,0	1/1:0,25:25:72.24:1008,72,0	1/1:0,31:31:75.25:1050,75,0	1/1:4,20:24:60.17:803,60,0	1/1:0,12:12:33.11:461,33,0	1/1:2,40:42:99:1595,114,0	1/1:0,17:18:42.13:573,42,0	1/1:0,23:23:57.19:797,57,0	1/1:3,35:38:96.32:1343,96,0	1/1:0,21:21:57.19:796,57,0	1/1:0,25:25:75.24:1035,75,0	1/1:4,34:36:99:1427,102,0	1/1:0,9:9:27.09:378,27,0
chr10	43858749	.	C	CTTCACCCTTGT	36058.03	PASS	AB=0.636;AC=45;AF=0.804;AN=56;BaseQRankSum=9.221;DP=581;FS=24.592;HRun=0;HaplotypeScore=197.8018;InbreedingCoeff=0.8695;MQ=72.62;MQ0=0;MQRankSum=-13.055;QD=77.71;ReadPosRankSum=1.563;VQSLOD=3.1960;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,9:24:30.10:1570,30,0	1/1:5,1:8:6.02:285,6,0	0/0:22,0:22:44.30:0,44,1374	0/0:15,0:15:24.06:0,24,913	1/1:10,9:22:39.05:1788,39,0	0/0:22,0:22:54.17:0,54,1672	0/0:25,0:25:57.15:0,57,1650	1/1:23,2:36:66.15:2537,66,0	0/0:33,0:33:96.30:0,96,2845	1/1:14,8:26:60.16:2521,60,0	1/1:5,3:11:21.07:1156,21,0	1/1:4,5:9:18.06:1000,18,0	1/1:8,12:24:51.18:2664,51,0	1/1:12,9:28:47.94:2430,48,0	1/1:9,8:26:33.11:1802,33,0	1/1:7,4:17:27.09:1423,27,0	0/1:6,6:14:9.72:712,0,10	1/1:5,10:24:30.09:1615,30,0	1/1:10,6:23:48.14:1881,48,0	1/1:6,8:17:27.05:1353,27,0	1/1:27,4:31:45.08:1756,45,0	1/1:7,8:15:33.11:1810,33,0	1/1:8,3:16:20.61:833,21,0	1/1:9,7:22:27.01:1078,27,0	1/1:3,7:15:27.09:1467,27,0	1/1:7,9:23:48.11:1876,48,0	1/1:6,9:21:33.11:1694,33,0	1/1:7,4:11:18.02:807,18,0
chr10	43858858	.	TTGTC	T	4501.34	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=7.089;DP=644;FS=2.523;HRun=0;HaplotypeScore=156.1354;InbreedingCoeff=0.9916;MQ=69.32;MQ0=0;MQRankSum=-8.010;QD=22.97;ReadPosRankSum=5.274;VQSLOD=4.6454;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,108,2580	1/1:3,6:9:21.07:347,21,0	0/0:31,0:22:42.13:0,42,862	0/0:45,0:41:57.62:0,58,1272	0/0:32,0:32:72.25:0,72,1727	0/0:20,0:20:45.15:0,45,1075	0/0:29,0:29:72.23:0,72,1565	1/1:13,8:21:24.04:325,24,0	0/0:24,0:24:54.19:0,54,1324	0/0:24,0:24:60.20:0,60,1416	0/0:16,0:16:36.11:0,36,780	1/1:6,4:10:12.04:199,12,0	1/1:8,13:21:30.10:497,30,0	1/1:3,11:14:24.04:368,24,0	1/1:8,16:24:42.14:696,42,0	1/1:8,13:21:27.09:448,27,0	1/1:4,17:22:36.12:597,36,0	0/0:21,0:21:54.19:0,54,1293	0/0:27,0:27:48.16:0,48,1095	0/0:19,0:19:45.15:0,45,1073	0/0:33,0:33:72.17:0,72,1580	1/1:0,10:10:18.02:269,18,0	1/1:6,11:17:17.60:209,18,0	1/1:9,18:27:32.97:547,33,0	0/0:23,0:23:57.20:0,57,1401	0/0:18,0:18:42.14:0,42,1030	0/0:28,0:28:51.17:0,51,1203	0/0:10,0:10:30.10:0,30,719
chr10	43859040	.	GGTCTTC	G	889.80	PASS	AB=0.978;AC=20;AF=0.357;AN=56;BaseQRankSum=7.105;DP=399;FS=8.827;HRun=0;HaplotypeScore=163.8208;InbreedingCoeff=-0.4145;MQ=67.12;MQ0=15;MQRankSum=-4.324;QD=3.22;ReadPosRankSum=1.918;VQSLOD=2.0727;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:27:99:114,0,109	1/1:4,0:4:7.19:45,7,0	0/0:30,0:12:22.96:0,23,455	0/0:43,0:19:29.72:0,30,697	0/1:16,0:14:19.75:127,0,20	0/0:3,0:3:9.03:0,9,308	0/0:12,0:12:30.10:0,30,687	0/1:27,0:25:41.16:41,0,233	0/0:4,0:4:12.04:0,12,314	0/1:15,0:15:81.81:82,0,118	0/1:8,0:7:12.68:58,0,13	0/1:9,1:11:0.57:1,0,177	0/1:12,1:12:22.34:22,0,287	0/0:3,0:3:2.71:0,3,22	0/1:10,0:9:16.51:17,0,95	0/1:10,1:11:37.04:37,0,103	0/1:14,1:16:22.93:23,0,257	0/1:19,1:19:58.76:98,0,59	0/1:19,0:18:23:23,0,155	0/1:19,0:18:27:27,0,122	0/0:6,0:5:1.97:0,2,6	0/0:8,0:8:21.19:0,21,258	0/1:13,0:13:48.32:48,0,223	0/0:11,0:9:12.95:0,13,172	0/1:12,0:11:43.55:71,0,44	0/1:10,0:10:11.24:11,0,100	0/1:15,0:15:83.55:193,0,84	0/1:10,0:10:9.50:10,0,116
chr10	43859063	.	TTTTTTTTTTC	T	4487.75	PASS	AB=1.000;AC=36;AF=0.643;AN=56;BaseQRankSum=7.132;DP=573;FS=12.393;HRun=0;HaplotypeScore=135.6390;InbreedingCoeff=0.2996;MQ=35.13;MQ0=137;MQRankSum=-3.754;QD=10.76;ReadPosRankSum=3.615;VQSLOD=3.0022;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:40,0:27:19.29:487,19,0	1/1:8,0:5:4.19:113,4,0	0/0:41,0:6:14.73:0,15,251	0/0:44,0:5:12.43:0,12,131	1/1:22,0:16:6.91:356,7,0	0/0:14,0:11:27.07:0,27,882	0/0:31,0:26:66.35:0,66,1209	1/1:13,17:25:63.90:748,64,0	0/0:11,0:9:21.07:0,21,743	1/1:17,1:8:20.65:323,21,0	1/1:9,0:4:6.02:118,6,0	0/1:12,0:10:27.19:27,0,146	0/1:17,0:10:32.34:32,0,215	1/1:7,0:5:11.40:64,11,0	0/0:15,0:14:14.68:0,15,129	0/1:15,0:11:8.64:9,0,85	0/1:31,0:20:99:125,0,167	0/1:28,0:22:3.04:166,0,3	1/1:21,0:14:16.78:416,17,0	1/1:20,0:16:2.26:224,2,0	1/1:9,0:3:2.74:12,3,0	0/1:13,0:11:8.68:9,0,242	0/1:13,0:13:73.06:73,0,296	0/1:24,0:11:13.19:13,0,118	1/1:24,0:14:14.46:308,14,0	1/1:18,0:13:12.98:243,13,0	1/1:20,0:17:13:491,13,0	1/1:18,0:5:5.73:131,6,0
chr10	43859064	.	TTTTTTTTTC	T	5217.66	PASS	AB=0.991;AC=38;AF=0.679;AN=56;BaseQRankSum=7.661;DP=564;FS=10.090;HRun=0;HaplotypeScore=121.3807;InbreedingCoeff=0.2812;MQ=35.43;MQ0=137;MQRankSum=-1.699;QD=12.33;ReadPosRankSum=3.467;VQSLOD=2.2209;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:14,23:24:29.70:621,30,0	1/1:7,0:5:4.36:97,4,0	0/0:40,0:6:14.73:0,15,221	0/0:44,0:5:11.80:0,12,92	1/1:6,15:15:17.42:454,17,0	0/0:14,0:11:26.58:0,27,772	0/0:31,0:26:65.69:0,66,1052	1/1:29,1:25:56.70:602,57,0	0/0:12,0:10:24.07:0,24,668	1/1:11,6:8:20.97:366,21,0	1/1:7,2:4:6.02:145,6,0	0/1:13,0:11:45.68:46,0,117	0/1:17,0:10:55.79:56,0,143	1/1:7,0:5:11.49:82,11,0	0/1:16,0:15:5.80:6,0,72	0/1:15,0:11:34.05:34,0,69	0/1:31,0:20:99:104,0,193	1/1:9,17:20:12.02:228,12,0	1/1:9,12:14:27.49:530,27,0	1/1:5,14:15:12.04:267,12,0	1/1:5,3:3:2.74:12,3,0	0/1:13,0:11:25.75:26,0,202	0/1:12,0:13:99:108,0,220	0/1:24,0:11:17.12:17,0,67	1/1:10,12:12:15.05:375,15,0	1/1:7,10:12:21.71:268,22,0	1/1:4,16:17:23.20:619,23,0	1/1:14,3:4:6.02:156,6,0
chr10	43859065	.	TTTTTTTTCC	T	4262.48	PASS	AB=0.969;AC=36;AF=0.643;AN=56;BaseQRankSum=9.097;DP=565;FS=7.100;HRun=0;HaplotypeScore=124.4993;InbreedingCoeff=0.2252;MQ=33.86;MQ0=139;MQRankSum=-2.843;QD=10.01;ReadPosRankSum=4.799;VQSLOD=2.8228;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:37,0:24:25.67:437,26,0	1/1:9,0:5:11.63:163,12,0	0/0:39,0:6:15.09:0,15,195	0/0:43,0:4:8.91:0,9,46	1/1:21,0:15:12.92:336,13,0	0/0:14,0:11:26.12:0,26,702	0/0:31,0:26:65.59:0,66,1186	0/1:30,0:25:4.60:211,0,5	0/0:12,0:10:24.08:0,24,652	1/1:18,0:8:17.89:255,18,0	1/1:9,0:4:6.02:114,6,0	0/1:9,4:11:57.33:89,0,57	0/1:17,0:10:45.35:110,0,45	1/1:7,0:5:12.03:154,12,0	0/1:16,0:15:12.46:73,0,12	0/1:16,0:12:20.67:77,0,21	0/1:31,0:20:99:206,0,106	1/1:25,0:20:12.04:179,12,0	1/1:21,0:14:15.26:294,15,0	1/1:19,0:15:12.01:195,12,0	0/1:9,0:3:0:0,0,0	0/1:12,1:11:50.05:50,0,97	0/1:12,0:12:85.55:225,0,86	0/1:26,0:12:20.52:88,0,21	1/1:22,0:12:15.05:293,15,0	1/1:17,0:12:9.11:126,9,0	1/1:20,0:17:17.89:470,18,0	1/1:17,0:4:6.02:118,6,0
chr10	43859067	.	TTTTTTCC	T	2931.77	PASS	AB=0.970;AC=36;AF=0.643;AN=56;BaseQRankSum=7.948;DP=564;FS=5.159;HRun=0;HaplotypeScore=118.6362;InbreedingCoeff=0.1494;MQ=32.16;MQ0=140;MQRankSum=-3.886;QD=6.82;ReadPosRankSum=6.361;VQSLOD=1.4295;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:37,0:24:22.41:257,22,0	1/1:9,0:5:11.63:137,12,0	0/0:36,0:5:11.90:0,12,141	0/0:40,0:3:5.28:0,5,20	1/1:21,0:15:15.80:217,16,0	0/0:14,0:11:25.62:0,26,549	0/0:31,0:26:58.50:0,58,941	0/1:30,0:25:21.05:143,0,21	0/0:13,0:11:27.09:0,27,556	1/1:18,0:8:8.52:139,9,0	1/1:9,0:4:6.02:73,6,0	0/1:13,0:11:19.68:64,0,20	0/1:19,0:11:58.69:127,0,59	1/1:7,0:5:12.03:137,12,0	0/1:15,0:14:3.82:125,0,4	0/1:9,7:12:15.48:132,0,15	0/1:34,0:22:75.55:171,0,76	1/1:26,0:20:12.03:130,12,0	0/1:20,0:13:2.08:141,0,2	1/1:19,0:15:11.98:131,12,0	1/1:9,0:3:0.47:1,0,0	0/1:15,0:13:59.97:96,0,60	0/1:12,0:12:77.05:178,0,77	0/1:25,0:12:21.26:73,0,21	1/1:22,0:12:15.05:190,15,0	1/1:17,0:12:3.11:75,3,0	1/1:20,0:17:6.65:294,7,0	1/1:17,0:4:6.02:77,6,0
chr10	43859071	.	TTCC	T	1540.90	PASS	AB=0.917;AC=40;AF=0.714;AN=56;BaseQRankSum=7.839;DP=547;FS=3.026;HRun=0;HaplotypeScore=99.6982;InbreedingCoeff=0.4291;MQ=32.94;MQ0=137;MQRankSum=-3.711;QD=3.69;ReadPosRankSum=4.605;VQSLOD=1.8310;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:36,0:23:19.35:81,19,0	1/1:8,0:4:9:87,9,0	0/0:32,0:4:8.78:0,9,111	0/0:39,0:3:4.15:0,4,19	1/1:20,0:15:16.85:84,17,0	0/0:15,0:12:14.17:0,14,312	0/0:30,0:25:39.41:0,39,648	1/1:28,0:22:1.53:32,2,0	0/0:13,0:11:30.10:0,30,448	1/1:18,0:8:6.43:39,6,0	1/1:10,0:5:5.27:34,5,0	1/1:12,1:11:8.48:74,8,0	1/1:18,1:11:11.87:126,12,0	1/1:6,0:5:11.95:122,12,0	0/1:7,9:15:0.14:74,0,0	1/1:16,0:12:8.55:80,9,0	0/1:32,0:20:21.98:168,0,22	1/1:25,0:20:10.99:61,11,0	1/1:19,0:13:5.36:46,5,0	1/1:19,0:15:9.02:37,9,0	0/1:9,0:3:0:0,0,0	0/1:14,0:12:28.48:126,0,28	0/1:8,0:9:1.71:135,0,2	0/1:24,0:12:1.25:80,0,1	1/1:22,0:12:13.97:66,14,0	1/1:16,0:11:8.23:33,8,0	1/1:20,0:17:15.10:96,15,0	1/1:17,0:4:5.54:25,6,0
chr10	43859753	.	C	CAA	1248.88	PASS	AB=0.727;AC=1;AF=0.018;AN=56;BaseQRankSum=10.489;DP=687;FS=3.729;HRun=0;HaplotypeScore=101.2436;InbreedingCoeff=0.5449;MQ=81.43;MQ0=0;MQRankSum=-10.218;QD=22.30;ReadPosRankSum=-2.340;VQSLOD=3.5680;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,132,2125	0/0:9,0:9:27.09:0,27,435	0/0:27,0:27:81.23:0,81,1218	0/0:15,0:15:39.10:0,39,597	0/0:14,0:14:42.14:0,42,681	0/0:30,0:30:87.25:0,87,1384	0/0:17,0:17:51.14:0,51,803	0/1:35,21:56:1.90:1323,0,2	0/0:25,0:25:69.24:0,69,1123	0/0:20,0:20:57.19:0,57,908	0/0:16,0:16:45.15:0,45,728	0/0:19,0:19:57.17:0,57,870	0/0:27,0:27:81.28:0,81,1318	0/0:28,0:28:84.26:0,84,1319	0/0:31,0:31:90.31:0,90,1460	0/0:23,0:23:63.22:0,63,1026	0/0:26,0:26:78.27:0,78,1269	0/0:6,0:6:18.06:0,18,293	0/0:21,0:21:60.20:0,60,977	0/0:15,0:15:45.15:0,45,727	0/0:41,0:41:99:0,120,1913	0/0:32,0:32:93.30:0,93,1486	0/0:27,0:27:78.25:0,78,1245	0/0:21,0:21:63.22:0,63,1026	0/0:23,0:23:66.70:0,67,1076	0/0:25,0:25:75.23:0,75,1154	0/0:26,0:26:78.27:0,78,1248	0/0:23,0:23:69.18:0,69,1093
chr10	43860381	.	AGTT	A	19809.50	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=10.776;DP=591;FS=2.010;HRun=0;HaplotypeScore=175.6148;InbreedingCoeff=0.9972;MQ=70.19;MQ0=0;MQRankSum=-9.678;QD=39.38;ReadPosRankSum=5.008;VQSLOD=5.8733;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,24:25:60.21:995,60,0	1/1:0,8:8:24.08:399,24,0	0/0:16,0:16:38.92:0,39,675	0/0:10,0:11:29.68:0,30,420	1/1:1,26:27:57.19:939,57,0	0/0:14,0:14:39.11:0,39,839	0/0:23,0:23:66.23:0,66,1432	1/1:4,28:32:84.27:1368,84,0	0/0:24,0:24:72.25:0,72,1558	1/1:3,31:34:99:1612,99,0	1/1:3,21:24:48.16:791,48,0	1/1:2,19:21:57.19:923,57,0	1/1:0,14:14:39.13:631,39,0	1/1:0,17:17:42.14:683,42,0	1/1:0,24:24:63.22:1043,63,0	1/1:0,15:15:42.14:699,42,0	1/1:1,24:25:57.19:947,57,0	1/1:3,15:18:42.14:697,42,0	1/1:3,16:19:48.16:796,48,0	1/1:2,27:29:51.17:840,51,0	1/1:3,27:30:57.19:935,57,0	1/1:1,17:18:36.10:580,36,0	1/1:2,20:22:45.15:747,45,0	1/1:0,20:20:48.16:799,48,0	1/1:1,19:20:54.18:895,54,0	1/1:1,36:37:99:1741,105,0	1/1:3,12:15:26.78:448,27,0	1/1:0,9:9:18.06:299,18,0
chr10	43860592	.	ATGAGGGTCAGAC	A	8411.46	PASS	AB=1.000;AC=30;AF=0.536;AN=56;BaseQRankSum=-0.722;DP=571;FS=3.357;HRun=0;HaplotypeScore=256.1837;InbreedingCoeff=0.2225;MQ=93.66;MQ0=0;MQRankSum=-8.578;QD=20.62;ReadPosRankSum=-0.638;VQSLOD=3.8741;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:43,0:43:84.78:85,0,3297	1/1:1,8:9:18.06:662,18,0	0/0:27,0:27:68.49:0,68,2517	0/0:30,0:30:62.32:0,62,2480	0/1:14,0:14:19.90:20,0,1008	0/0:20,0:20:54.14:0,54,2550	0/0:32,0:32:93.31:0,93,4487	0/1:27,0:27:99:342,0,977	0/0:29,0:29:81.20:0,81,3638	0/1:21,0:21:68.36:68,0,1732	0/0:8,0:8:14.78:0,15,642	1/1:3,13:16:21.07:773,21,0	1/1:1,9:10:12.04:442,12,0	1/1:1,16:17:24.08:883,24,0	1/1:3,14:17:30.10:1103,30,0	1/1:2,12:14:21.07:773,21,0	1/1:5,21:26:18.06:662,18,0	0/1:33,0:33:92.01:92,0,2859	0/1:16,0:16:57.78:58,0,1300	0/1:19,0:19:67.14:67,0,1641	0/1:35,0:35:99:187,0,2709	1/1:4,14:18:30.10:1103,30,0	1/1:0,10:10:14.84:551,15,0	1/1:10,4:14:18.52:411,19,0	0/1:23,0:23:77.68:78,0,1835	0/1:26,0:25:53.70:54,0,2481	0/0:15,0:15:1.39:0,1,1269	0/0:2,0:2:6.02:0,6,258
chr10	43860801	.	G	GA	6127.95	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=2.461;DP=571;FS=7.728;HRun=0;HaplotypeScore=198.2204;InbreedingCoeff=0.9187;MQ=88.63;MQ0=0;MQRankSum=-14.460;QD=34.23;ReadPosRankSum=3.216;VQSLOD=3.5291;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:85.80:0,86,365	1/1:0,4:4:12.04:153,12,0	0/0:21,0:21:60.16:0,60,776	0/0:28,0:28:78.16:0,78,1019	0/0:17,0:17:26.90:0,27,108	0/0:21,0:21:60.20:0,60,838	0/0:27,0:27:81.27:0,81,1133	0/0:23,0:23:50.49:0,50,422	0/0:18,0:18:54.18:0,54,755	0/0:20,0:20:34.04:0,34,243	0/0:15,0:15:5.95:0,6,117	1/1:1,15:16:45.15:605,45,0	1/1:0,12:13:33.57:424,34,0	1/1:0,20:20:60.18:812,60,0	1/1:3,10:14:34.74:432,35,0	1/1:0,24:23:69.23:934,69,0	1/1:0,28:29:75.73:1001,76,0	0/0:11,0:11:21.89:0,22,75	0/0:18,0:18:41.09:0,41,278	0/0:22,0:22:12.99:0,13,122	0/0:28,0:28:61.70:0,62,353	1/1:0,14:15:44.17:575,44,0	1/1:0,16:17:48.05:634,48,0	1/1:1,18:19:41.94:554,42,0	0/0:18,0:18:12.02:0,12,105	0/0:25,0:25:55.14:0,55,295	0/0:34,0:33:43.11:0,43,179	0/1:8,0:8:3.81:4,0,14
chr10	43860802	.	T	TC	16976.82	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=14.634;DP=581;FS=10.670;HRun=1;HaplotypeScore=163.9082;InbreedingCoeff=0.9922;MQ=88.83;MQ0=0;MQRankSum=-9.675;QD=36.51;ReadPosRankSum=4.390;VQSLOD=2.8808;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,43:44:99:1682,123,0	1/1:4,0:4:12.04:160,12,0	0/0:22,0:22:60.19:0,60,769	0/0:28,0:28:75.17:0,75,917	1/1:1,16:17:43.37:612,43,0	0/0:21,0:21:57.19:0,57,740	0/0:27,0:27:81.25:0,81,1037	1/1:6,17:23:66.10:857,66,0	0/0:18,0:18:54.18:0,54,701	1/1:1,20:21:57.19:773,57,0	1/1:2,13:15:39.13:543,39,0	1/1:17,0:17:45.15:612,45,0	1/1:13,0:13:33.58:433,34,0	1/1:20,0:20:60.20:802,60,0	1/1:16,0:16:37:478,37,0	1/1:25,0:24:69.23:927,69,0	1/1:29,0:29:76.49:1054,76,0	1/1:0,12:12:30.10:419,30,0	1/1:4,16:20:54.65:738,55,0	1/1:0,22:22:62.10:865,62,0	1/1:5,24:29:67.16:906,67,0	1/1:16,0:16:45.10:560,45,0	1/1:17,0:17:48.16:652,48,0	1/1:19,0:19:44.94:593,45,0	1/1:1,17:18:54.17:728,54,0	1/1:2,24:26:69.16:925,69,0	1/1:0,34:33:96.30:1320,96,0	1/1:0,8:8:24.08:336,24,0
chr10	43861192	.	G	GTTT	7857.44	PASS	AB=1.000;AC=48;AF=0.857;AN=56;BaseQRankSum=0.682;DP=395;FS=2.725;HRun=11;HaplotypeScore=75.9096;InbreedingCoeff=0.6098;MQ=74.98;MQ0=0;MQRankSum=-2.980;QD=22.39;ReadPosRankSum=-1.715;VQSLOD=3.3616;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,11:19:30.04:468,30,0	1/1:1,0:4:6.02:91,6,0	0/0:11,0:12:0.40:0,0,118	0/1:9,0:8:10.38:10,0,15	1/1:3,9:14:26.89:322,27,0	0/0:20,0:20:17.30:0,17,420	0/0:11,0:12:32.97:0,33,356	1/1:31,0:31:51.04:246,51,0	0/1:11,0:11:2.21:2,0,178	1/1:1,6:8:21.02:327,21,0	1/1:5,14:20:44.90:579,45,0	1/1:1,10:12:18.01:301,18,0	1/1:4,5:11:15.05:269,15,0	1/1:1,9:11:18.04:305,18,0	1/1:6,0:16:12.04:174,12,0	1/1:5,0:16:17.89:258,18,0	1/1:5,0:14:12:154,12,0	1/1:4,11:22:38.84:572,39,0	1/1:0,7:7:20.95:241,21,0	1/1:3,8:13:30.02:460,30,0	1/1:2,8:10:9.03:169,9,0	1/1:1,3:4:3.01:56,3,0	1/1:4,13:18:32.97:541,33,0	1/1:2,15:19:39.12:659,39,0	1/1:5,13:19:30.10:561,30,0	1/1:7,3:11:16.66:285,17,0	1/1:5,9:17:30.06:483,30,0	1/1:0,12:15:21.03:322,21,0
chr10	43861203	.	T	TTC	1713.69	PASS	AB=0.996;AC=27;AF=0.482;AN=56;BaseQRankSum=4.989;DP=335;FS=6.914;HRun=0;HaplotypeScore=65.8269;InbreedingCoeff=-0.0795;MQ=69.27;MQ0=0;MQRankSum=-1.256;QD=6.49;ReadPosRankSum=5.530;VQSLOD=1.3095;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:18,0:18:29.95:30,0,65	0/0:5,0:5:1.51:0,2,16	0/0:9,0:9:15.15:0,15,161	0/1:5,0:4:11.27:11,0,17	0/1:15,0:15:26.66:27,0,71	0/0:15,0:15:42.14:0,42,570	0/0:14,0:14:39.07:0,39,482	1/1:2,25:28:78.22:1263,78,0	0/0:9,0:9:22.62:0,23,274	0/1:10,0:10:19.18:19,0,43	0/1:16,0:17:60.69:71,0,61	1/1:9,0:9:7.41:32,7,0	0/1:8,0:8:12.73:19,0,13	1/1:8,0:8:10.68:43,11,0	0/1:10,0:10:15.30:15,0,31	0/1:10,0:10:6.24:6,0,18	0/0:9,0:9:5.24:0,5,51	1/1:16,0:16:23.09:113,23,0	0/1:4,0:4:0.59:13,0,1	0/1:10,0:10:25.93:26,0,26	0/1:10,0:10:0.28:0,0,19	1/1:3,0:3:2.50:9,2,0	0/1:17,0:17:22.05:22,0,70	1/1:18,0:18:6.06:50,6,0	0/1:16,0:16:20.68:21,0,45	0/0:10,0:10:20.85:0,21,134	0/1:15,0:15:28.79:41,0,29	0/1:17,0:17:29.23:50,0,29
chr10	43861292	.	G	GA	5743.09	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-3.886;DP=371;FS=14.127;HRun=8;HaplotypeScore=52.9431;InbreedingCoeff=0.8757;MQ=61.77;MQ0=0;MQRankSum=-9.933;QD=19.08;ReadPosRankSum=-1.426;VQSLOD=3.0633;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,10:15:24.06:267,24,0	1/1:1,10:11:19.14:301,19,0	0/0:13,0:13:17.99:0,18,161	0/0:9,0:9:9.82:0,10,118	1/1:14,10:24:26.69:293,27,0	0/0:16,0:16:45.02:0,45,412	0/0:18,0:18:44.97:0,45,404	1/1:14,6:19:25.23:252,25,0	0/0:14,0:14:35.98:0,36,322	1/1:7,16:23:48.61:553,49,0	1/1:14,12:26:33.86:335,34,0	1/1:1,9:10:21.06:239,21,0	1/1:2,7:9:21.06:242,21,0	1/1:0,3:3:9.03:104,9,0	1/1:1,12:13:30.09:346,30,0	1/1:2,4:6:12.04:138,12,0	1/1:2,3:5:11.85:106,12,0	1/1:2,3:5:8.01:102,8,0	1/1:5,5:9:15.80:155,16,0	1/1:9,13:22:42.08:470,42,0	1/1:5,0:5:4.32:23,4,0	1/1:1,8:9:22.31:245,22,0	1/1:8,7:15:24.07:273,24,0	1/1:4,5:8:6.02:70,6,0	1/1:6,15:21:45.13:514,45,0	1/1:5,5:10:14.56:171,15,0	1/1:5,9:13:17.17:362,17,0	1/1:12,4:16:18:184,18,0
chr10	43861670	.	GGGGAT	G	27834.24	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=9.314;DP=588;FS=1.943;HRun=0;HaplotypeScore=132.4359;InbreedingCoeff=0.9890;MQ=77.94;MQ0=0;MQRankSum=-10.127;QD=56.00;ReadPosRankSum=4.902;VQSLOD=5.4788;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,42:45:96.28:2062,96,0	1/1:0,5:5:15.01:284,15,0	0/0:23,0:23:64.60:0,65,1713	0/0:14,0:14:39.13:0,39,1170	1/1:1,17:19:39.01:855,39,0	0/0:22,0:22:66.23:0,66,2078	0/0:15,0:15:45.15:0,45,1431	1/1:2,33:35:96.29:1997,96,0	0/0:17,0:17:51.18:0,51,1647	1/1:1,24:25:75.26:1645,75,0	1/1:0,11:11:30.10:659,30,0	1/1:0,19:19:51.17:1090,51,0	1/1:0,26:26:72.25:1581,72,0	1/1:2,28:30:81.28:1779,81,0	1/1:1,19:20:57.15:1206,57,0	1/1:1,29:30:78.74:1714,79,0	1/1:1,30:31:81.28:1777,81,0	1/1:0,13:13:36.12:791,36,0	1/1:1,16:17:42.02:922,42,0	1/1:0,15:15:42.14:921,42,0	1/1:1,18:19:39.13:856,39,0	1/1:0,14:14:39.13:857,39,0	1/1:1,18:19:45.15:987,45,0	1/1:2,21:23:54.19:1186,54,0	1/1:0,17:17:42.14:922,42,0	1/1:0,30:30:84.29:1768,84,0	1/1:1,29:30:78.27:1713,78,0	1/1:0,4:4:12.04:264,12,0
chr10	43862671	.	A	AC	2586.37	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=0.909;DP=266;FS=38.643;HRun=5;HaplotypeScore=64.0349;InbreedingCoeff=0.8989;MQ=90.38;MQ0=0;MQRankSum=-3.075;QD=24.87;ReadPosRankSum=3.027;VQSLOD=1.3473;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,14:15:39.13:513,39,0	0/0:4,0:4:9.02:0,9,94	0/0:8,0:9:18.04:0,18,193	0/0:14,0:15:30.02:0,30,264	1/1:1,7:8:17.92:194,18,0	0/0:8,0:8:21.05:0,21,225	0/0:19,0:19:45.11:0,45,484	0/0:14,0:14:26.27:0,26,256	0/0:16,0:16:42.10:0,42,451	1/1:1,3:4:9.03:118,9,0	1/1:2,0:2:6.02:76,6,0	0/0:12,0:12:21.41:0,21,220	0/0:9,0:9:24.04:0,24,244	0/0:9,0:9:23.85:0,24,224	0/0:7,0:7:20.99:0,21,208	0/0:8,0:8:15.03:0,15,159	0/0:6,0:6:18.05:0,18,191	1/1:0,2:2:3.01:39,3,0	1/1:4,10:15:30.08:377,30,0	1/1:2,8:10:18.06:235,18,0	1/1:4,21:25:39.13:513,39,0	0/0:9,0:9:24.06:0,24,251	0/0:5,0:5:12.03:0,12,128	0/0:11,0:11:27.07:0,27,286	1/1:1,9:10:27.09:355,27,0	1/1:1,5:6:15.04:183,15,0	1/1:1,5:6:12.04:158,12,0	1/1:0,1:1:3.01:39,3,0
chr10	43862720	.	C	CT	1592.38	PASS	AC=26;AF=0.565;AN=46;BaseQRankSum=4.355;DP=145;FS=6.214;HRun=1;HaplotypeScore=45.1975;InbreedingCoeff=0.6529;MQ=94.69;MQ0=0;MQRankSum=-6.194;QD=23.42;ReadPosRankSum=-0.663;VQSLOD=3.0885;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:7:3.12:0,3,41	1/1:1,0:1:2.98:22,3,0	0/0:15,0:13:29.45:0,29,345	0/0:15,0:13:8.99:0,9,180	./.	0/0:5,0:5:15.04:0,15,182	0/0:12,0:12:36.12:0,36,466	1/1:6,4:10:23.65:293,24,0	0/0:10,0:10:30.08:0,30,372	./.	./.	1/1:1,8:9:24.08:329,24,0	1/1:0,3:5:14.88:174,15,0	1/1:1,6:7:15.05:210,15,0	1/1:1,6:7:15.01:186,15,0	1/1:1,7:8:18.01:240,18,0	1/1:1,1:2:3.01:43,3,0	0/0:1,0:1:2.99:0,3,23	0/0:3,0:3:6.01:0,6,54	./.	0/0:3,0:3:2.60:0,3,19	1/1:2,3:5:8.98:105,9,0	1/1:0,4:4:5.98:64,6,0	1/1:1,3:4:5.61:55,6,0	0/0:4,0:4:2.97:0,3,20	1/1:3,0:3:0.03:13,0,0	1/1:3,0:3:0.73:23,1,0	./.
chr10	43862721	.	T	TC	797.76	PASS	AB=0.933;AC=27;AF=0.587;AN=46;BaseQRankSum=5.477;DP=139;FS=10.787;HRun=3;HaplotypeScore=46.8187;InbreedingCoeff=0.5582;MQ=94.20;MQ0=0;MQRankSum=-4.460;QD=10.50;ReadPosRankSum=-1.150;VQSLOD=-0.0013;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,0:7:2.95:23,3,0	0/0:1,0:1:0:0,0,0	0/0:15,0:13:25:0,25,320	0/0:14,0:12:6.89:0,7,201	./.	0/0:5,0:5:12.02:0,12,136	0/0:12,0:12:36.11:0,36,436	1/1:7,0:7:14.48:106,14,0	0/0:10,0:10:30.09:0,30,369	./.	./.	1/1:8,0:8:20.77:163,21,0	1/1:5,0:5:13.77:93,14,0	1/1:6,0:6:14.79:104,15,0	0/1:7,0:7:4.62:89,0,5	1/1:7,0:7:14.93:126,15,0	1/1:2,0:2:2.94:18,3,0	0/0:1,0:1:0.47:0,0,1	0/1:4,0:4:0:0,0,0	./.	0/0:2,1:3:0.11:0,0,1	1/1:5,0:5:5.94:51,6,0	1/1:4,0:4:3:29,3,0	1/1:4,0:4:3.47:25,3,0	0/1:3,1:4:0:0,0,0	1/1:2,1:3:5.85:53,6,0	1/1:1,2:3:3.82:61,4,0	./.
chr10	43862859	.	GT	G	4271.50	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=8.046;DP=439;FS=48.965;HRun=7;HaplotypeScore=78.4423;InbreedingCoeff=0.9797;MQ=83.66;MQ0=0;MQRankSum=-2.763;QD=25.58;ReadPosRankSum=3.053;VQSLOD=1.7212;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,22:22:63.14:642,63,0	0/0:8,0:8:15.05:0,15,188	0/0:14,0:13:30.07:0,30,336	0/0:18,0:17:49.38:0,49,575	1/1:2,15:17:30.06:303,30,0	0/0:19,0:19:57.18:0,57,717	0/0:14,0:14:42.12:0,42,515	0/0:27,0:27:78.24:0,78,969	0/0:23,0:23:69.21:0,69,855	1/1:0,8:8:24.04:237,24,0	1/1:1,17:18:48.11:489,48,0	0/0:21,0:21:60.18:0,60,744	0/0:11,0:11:33.11:0,33,415	0/0:12,0:12:33.11:0,33,415	0/0:15,0:15:45.13:0,45,553	0/0:12,0:12:33.11:0,33,412	0/0:32,0:31:90.29:0,90,1132	1/1:0,15:15:39.09:398,39,0	1/1:3,12:15:36.07:367,36,0	1/1:0,21:21:54.12:550,54,0	1/1:0,9:9:21.05:214,21,0	0/0:11,0:11:33.11:0,33,415	0/0:17,0:17:39.12:0,39,489	0/0:18,0:18:51.16:0,51,641	1/1:1,6:7:15.03:153,15,0	1/1:1,14:15:42.09:428,42,0	1/1:1,17:18:42.10:429,42,0	1/1:0,2:2:6.01:61,6,0
chr10	43863433	.	T	TGACC	12355.12	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-1.916;DP=536;FS=1.594;HRun=0;HaplotypeScore=84.5977;InbreedingCoeff=0.9580;MQ=57.47;MQ0=2;MQRankSum=-2.941;QD=54.67;ReadPosRankSum=3.317;VQSLOD=6.1827;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,43:51:93.11:2407,93,0	0/0:2,0:2:6.02:0,6,112	0/0:29,0:24:66.10:0,66,1003	0/0:20,0:20:43.68:0,44,879	1/1:2,6:8:15.05:388,15,0	0/0:15,0:15:42.13:0,42,753	0/0:25,0:25:72.23:0,72,1283	0/0:38,0:38:99:0,111,1918	0/0:21,0:21:63.20:0,63,1127	1/1:0,10:10:30.05:726,30,0	1/1:1,7:8:18.06:476,18,0	0/0:14,0:14:39.12:0,39,677	0/0:17,0:17:45.14:0,45,806	0/0:12,0:12:33.07:0,33,579	0/0:16,0:16:48.05:0,48,816	0/0:19,0:19:51.12:0,51,907	0/0:36,0:36:99:0,102,1870	1/1:5,24:29:75.21:1931,75,0	1/1:1,9:11:30.07:638,30,0	1/1:3,12:17:36.12:954,36,0	1/1:1,46:48:90.31:2333,90,0	0/0:8,0:8:20.71:0,21,381	0/0:6,0:6:12.03:0,12,193	0/0:32,0:32:90.29:0,90,1631	1/1:1,4:5:6.02:160,6,0	1/1:1,13:14:39.13:1020,39,0	1/1:1,16:17:39.13:1002,39,0	1/1:0,4:4:12.04:319,12,0
chr10	43863638	.	C	CG	2210.45	PASS	AB=0.545;AC=45;AF=0.804;AN=56;BaseQRankSum=6.143;DP=155;FS=13.742;HRun=0;HaplotypeScore=39.6212;InbreedingCoeff=0.6721;MQ=79.65;MQ0=2;MQRankSum=-7.624;QD=21.89;ReadPosRankSum=2.122;VQSLOD=4.2581;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,0:5:10.08:61,10,0	1/1:0,3:3:6.02:77,6,0	0/0:15,0:13:31.84:0,32,372	0/0:11,0:9:15.70:0,16,172	1/1:5,0:5:14.87:109,15,0	0/0:8,0:8:21.07:0,21,292	0/0:13,0:13:39.11:0,39,526	0/1:1,0:6:1.50:80,0,1	0/0:6,0:6:18.06:0,18,252	1/1:3,0:3:8.85:57,9,0	1/1:4,0:5:8.76:58,9,0	1/1:0,6:6:18.06:243,18,0	1/1:0,6:6:18.06:247,18,0	1/1:0,5:5:6.02:81,6,0	1/1:0,3:3:9.03:129,9,0	1/1:0,4:4:9.03:118,9,0	1/1:0,2:2:3.01:43,3,0	1/1:0,1:1:3.01:36,3,0	1/1:1,0:1:2.97:20,3,0	1/1:2,0:2:5.92:40,6,0	1/1:4,0:4:8.80:54,9,0	1/1:0,4:4:8.96:103,9,0	1/1:0,7:7:20.56:225,21,0	1/1:0,5:5:15.05:196,15,0	1/1:8,0:8:22.08:130,22,0	1/1:3,0:3:8.93:73,9,0	1/1:7,0:7:11.78:93,12,0	1/1:6,0:6:17.65:111,18,0
chr10	43863640	.	G	GGA	2816.95	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=5.725;DP=157;FS=15.501;HRun=0;HaplotypeScore=44.4137;InbreedingCoeff=0.7093;MQ=78.99;MQ0=2;MQRankSum=-7.073;QD=27.62;ReadPosRankSum=1.675;VQSLOD=3.3606;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,5:5:11.87:195,12,0	1/1:3,0:3:5.64:27,6,0	0/0:15,0:14:23.24:0,23,343	0/0:10,0:9:19.08:0,19,195	1/1:0,4:4:12.04:240,12,0	0/0:8,0:8:24.03:0,24,353	0/0:13,0:13:39.10:0,39,585	1/1:5,0:5:14.04:93,14,0	0/0:6,0:6:18.06:0,18,293	1/1:0,3:3:8.98:140,9,0	1/1:1,4:5:9.03:174,9,0	1/1:6,0:6:16.92:81,17,0	1/1:6,0:6:16.87:80,17,0	1/1:5,0:5:5.72:30,6,0	1/1:3,0:3:8.39:38,8,0	1/1:4,0:4:8.54:43,9,0	1/1:2,0:2:2.80:13,3,0	1/1:1,0:1:3.01:42,3,0	1/1:1,0:1:2.97:20,3,0	1/1:0,2:2:6.02:120,6,0	1/1:1,4:5:6.20:173,6,0	1/1:4,0:4:8.54:44,9,0	1/1:7,0:7:19.96:109,20,0	1/1:6,0:6:13.95:66,14,0	1/1:0,8:8:24.08:481,24,0	1/1:1,3:4:9.03:178,9,0	1/1:0,7:7:12.04:239,12,0	1/1:0,6:6:18.06:363,18,0
chr10	43863843	.	GCGCA	G	696.93	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=-1.335;DP=473;FS=1.891;HRun=0;HaplotypeScore=162.9084;InbreedingCoeff=0.2045;MQ=54.17;MQ0=7;MQRankSum=1.141;QD=8.50;ReadPosRankSum=-1.464;VQSLOD=2.5230;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:22.14:0,22,510	0/0:9,0:9:2.54:0,3,36	0/0:23,0:8:20.68:0,21,218	0/0:32,0:10:13.24:0,13,191	0/0:28,0:27:31.91:0,32,626	0/0:17,0:17:48.12:0,48,1293	0/0:22,0:22:66.17:0,66,1524	1/1:20,4:24:69.50:704,69,0	0/0:16,0:16:48.16:0,48,1276	0/0:32,0:32:92.68:0,93,2227	0/0:19,0:19:32.23:0,32,677	0/1:13,0:13:42.36:42,0,237	0/1:11,0:11:59.92:60,0,118	0/0:8,0:8:24.06:0,24,298	0/0:15,0:15:23.08:0,23,242	0/1:9,0:9:9.21:9,0,31	0/0:6,0:6:8.71:0,9,62	0/1:9,0:9:0.87:1,0,375	0/0:14,0:14:39.09:0,39,882	0/0:16,0:16:24.08:0,24,664	0/0:13,0:13:17.56:0,18,404	0/0:12,0:12:27.06:0,27,371	0/1:16,0:16:2.90:3,0,209	0/0:11,0:11:21.04:0,21,230	0/0:14,0:14:26.12:0,26,669	0/0:17,0:17:51.17:0,51,1330	0/0:28,0:28:56.89:0,57,1223	0/0:17,0:17:39.03:0,39,895
chr10	43863852	.	T	TAC	1712.67	PASS	AB=0.748;AC=18;AF=0.321;AN=56;BaseQRankSum=5.990;DP=522;FS=0.000;HRun=0;HaplotypeScore=163.8660;InbreedingCoeff=0.6461;MQ=51.25;MQ0=7;MQRankSum=-0.584;QD=10.57;ReadPosRankSum=-0.023;VQSLOD=3.1039;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:14.46:0,14,114	1/1:9,0:10:3:26,3,0	0/0:28,0:11:18.04:0,18,224	0/0:31,0:9:12.93:0,13,166	0/0:30,0:29:13.71:0,14,111	0/0:18,0:18:51.17:0,51,727	0/0:23,0:23:64.41:0,64,835	0/1:26,0:26:4.70:5,0,89	0/0:17,0:17:51.15:0,51,700	0/0:34,0:34:64.31:0,64,645	0/0:19,0:19:10.35:0,10,63	0/1:9,7:16:3.21:276,0,3	1/1:9,5:14:15.03:207,15,0	0/1:3,7:10:21.39:217,0,21	1/1:9,0:17:23.32:180,23,0	1/1:9,0:13:16.94:101,17,0	1/1:5,0:8:10.07:63,10,0	0/0:8,0:8:10.77:0,11,91	0/0:14,0:14:33.98:0,34,385	0/0:16,0:16:12.73:0,13,112	0/0:16,0:16:14.53:0,15,173	0/1:10,7:17:22.61:230,0,23	1/1:10,8:18:21.01:263,21,0	1/1:5,8:13:24.05:336,24,0	0/0:18,0:18:15.72:0,16,113	0/0:17,0:17:37.16:0,37,378	0/0:30,0:30:29.32:0,29,261	0/0:15,0:15:20.20:0,20,189
chr10	43863856	.	T	TACAC	6074.36	PASS	AB=0.913;AC=40;AF=0.714;AN=56;BaseQRankSum=6.582;DP=537;FS=0.665;HRun=0;HaplotypeScore=155.3245;InbreedingCoeff=0.5798;MQ=51.55;MQ0=9;MQRankSum=-2.561;QD=15.82;ReadPosRankSum=2.251;VQSLOD=4.3315;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,17:26:12.04:290,12,0	1/1:10,0:10:2.98:71,3,0	0/0:33,0:12:11.80:0,12,137	0/0:32,0:10:2.10:0,2,59	1/1:13,15:29:14.72:323,15,0	0/0:19,0:19:45.12:0,45,675	0/0:21,0:23:44.36:0,44,684	0/0:28,0:28:21.36:0,21,178	0/0:16,0:17:30.08:0,30,440	0/1:15,17:32:1:758,0,1	1/1:6,10:19:20.27:326,20,0	0/1:16,0:16:9.55:164,0,10	1/1:13,0:13:17.82:128,18,0	0/1:10,0:10:38.77:81,0,39	1/1:17,0:17:21.83:325,22,0	1/1:12,0:12:7.08:64,7,0	1/1:8,0:8:6.01:77,6,0	1/1:3,3:9:11.51:169,12,0	1/1:6,7:15:23.91:323,24,0	1/1:6,9:18:18.06:414,18,0	1/1:7,9:20:6.02:145,6,0	0/1:17,0:17:2.89:160,0,3	1/1:18,0:18:11.05:97,11,0	1/1:14,0:14:21.76:162,22,0	1/1:5,13:19:21.07:506,21,0	1/1:9,6:16:20.81:446,21,0	1/1:13,15:29:26.83:574,27,0	1/1:6,9:16:23.82:471,24,0
chr10	43864139	.	G	GA	8643.92	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-4.781;DP=681;FS=4.511;HRun=7;HaplotypeScore=138.1732;InbreedingCoeff=0.9997;MQ=82.47;MQ0=0;MQRankSum=-4.414;QD=28.34;ReadPosRankSum=0.965;VQSLOD=3.0579;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,22:24:57.17:689,57,0	0/0:14,0:14:30.04:0,30,289	0/0:25,1:26:46.20:0,46,581	0/0:17,0:17:40.14:0,40,400	1/1:8,24:32:69.13:800,69,0	0/0:31,0:31:84.11:0,84,799	0/0:11,0:11:33.02:0,33,305	0/0:29,0:29:78.10:0,78,741	0/0:37,0:37:99:0,105,1004	1/1:6,27:33:81.25:977,81,0	1/1:3,27:30:75.23:905,75,0	0/0:24,0:24:54.07:0,54,521	0/0:18,0:18:48.07:0,48,463	0/0:22,0:22:60.01:0,60,557	0/0:31,0:31:93.15:0,93,898	0/0:35,0:35:99:0,99,946	0/0:22,0:22:57.07:0,57,545	1/1:1,13:14:36.11:435,36,0	1/1:1,22:23:66.20:797,66,0	1/1:2,13:16:30.09:361,30,0	1/1:9,31:40:87.18:1032,87,0	0/0:21,0:21:57.09:0,57,550	0/0:19,0:19:51.08:0,51,492	0/0:19,0:19:54.09:0,54,521	1/1:3,15:18:33.10:399,33,0	1/1:3,26:29:78.23:929,78,0	1/1:7,26:33:72.15:851,72,0	1/1:0,13:13:39.12:471,39,0
chr10	43864395	.	A	ATGGGAG	42058.48	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-11.496;DP=782;FS=14.992;HRun=0;HaplotypeScore=133.3884;InbreedingCoeff=0.9947;MQ=77.91;MQ0=0;MQRankSum=-16.885;QD=67.19;ReadPosRankSum=5.071;VQSLOD=4.7227;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,29:38:72.25:2328,72,0	1/1:1,11:12:27.09:912,27,0	0/0:42,0:42:99:0,108,2258	0/0:28,0:28:71.97:0,72,1334	1/1:2,21:25:54.19:1839,54,0	0/0:28,0:28:81.24:0,81,1743	0/0:34,0:34:99:0,99,2268	1/1:10,19:32:81.26:2388,81,0	0/0:24,0:24:66.23:0,66,1517	1/1:3,33:37:99:3348,105,0	1/1:4,13:17:33.11:1152,33,0	1/1:7,31:41:84.29:2671,84,0	1/1:10,30:41:84.29:2736,84,0	1/1:5,23:29:57.20:1892,57,0	1/1:11,30:41:84.29:2645,84,0	1/1:4,34:40:15.10:2761,15,0	1/1:4,20:25:45.15:1545,45,0	1/1:2,13:17:24.08:779,24,0	1/1:5,16:22:54.15:1438,54,0	1/1:3,17:21:27.09:846,27,0	1/1:12,15:27:48.16:1593,48,0	1/1:4,15:20:39.13:1312,39,0	1/1:7,25:32:53.95:1833,54,0	1/1:4,15:19:24.08:799,24,0	1/1:0,15:17:36.12:1257,36,0	1/1:3,31:35:96.33:3029,96,0	1/1:5,19:24:57.20:1906,57,0	1/1:0,12:12:30.10:1049,30,0
chr10	43864664	.	G	GTATA	30393.79	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=8.106;DP=640;FS=0.964;HRun=0;HaplotypeScore=130.3885;InbreedingCoeff=0.9979;MQ=55.43;MQ0=0;MQRankSum=-8.446;QD=56.08;ReadPosRankSum=5.243;VQSLOD=6.1973;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,22:33:57.20:1486,57,0	1/1:3,9:13:21.07:554,21,0	0/0:19,0:18:39.12:0,39,664	0/0:18,0:18:45.11:0,45,782	1/1:4,26:30:54.08:1421,54,0	0/0:19,0:19:48.14:0,48,823	0/0:21,0:21:57.18:0,57,1012	1/1:13,14:29:66.20:1608,66,0	0/0:21,0:21:60.17:0,60,1033	1/1:3,17:20:54.16:1363,54,0	1/1:4,13:19:27.09:710,27,0	1/1:9,18:28:54.19:1418,54,0	1/1:4,14:18:42.14:1108,42,0	1/1:7,16:24:57.18:1447,57,0	1/1:7,23:31:66.23:1728,66,0	1/1:2,15:17:45.15:1178,45,0	1/1:2,27:29:72.25:1900,72,0	1/1:2,21:25:48.16:1255,48,0	1/1:6,14:21:51.17:1280,51,0	1/1:6,24:31:72.25:1898,72,0	1/1:5,13:18:30.10:791,30,0	1/1:1,14:15:39.13:1026,39,0	1/1:4,15:21:39.13:1017,39,0	1/1:4,11:17:24.08:634,24,0	1/1:6,23:29:60.21:1583,60,0	1/1:3,31:35:99:2497,99,0	1/1:4,23:27:69.24:1780,69,0	1/1:1,9:10:27.09:712,27,0
chr10	43864897	.	A	AT	16173.13	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-1.143;DP=493;FS=7.548;HRun=0;HaplotypeScore=96.0979;InbreedingCoeff=0.9844;MQ=92.22;MQ0=0;MQRankSum=-9.344;QD=42.67;ReadPosRankSum=5.644;VQSLOD=4.5689;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,23:26:60.20:951,60,0	1/1:0,5:5:9.03:144,9,0	0/0:27,0:27:75.25:0,75,1030	0/0:24,0:24:65.81:0,66,819	1/1:1,17:18:51.17:814,51,0	0/0:21,0:21:60.20:0,60,839	0/0:24,0:24:66.21:0,66,906	1/1:1,17:18:54.18:861,54,0	0/0:18,0:18:54.18:0,54,754	1/1:1,16:17:51.17:814,51,0	1/1:0,10:10:30.10:479,30,0	1/1:1,25:26:63.21:1005,63,0	1/1:1,13:14:39.13:618,39,0	1/1:0,20:20:57.19:910,57,0	1/1:0,24:24:66.23:1052,66,0	1/1:1,19:20:51.17:814,51,0	1/1:1,12:13:33.11:515,33,0	1/1:1,10:10:33.11:518,33,0	1/1:0,20:20:60.20:959,60,0	1/1:0,14:14:42.14:670,42,0	1/1:0,23:22:54.18:862,54,0	1/1:0,12:12:33.11:527,33,0	1/1:0,13:13:33.11:527,33,0	1/1:1,18:19:42.14:670,42,0	1/1:0,18:18:51.17:814,51,0	1/1:0,22:22:63.20:980,63,0	1/1:0,8:8:21.07:334,21,0	1/1:0,7:7:21.07:335,21,0
chr10	43864947	.	A	AGC	1291.82	PASS	AB=0.981;AC=33;AF=0.660;AN=50;BaseQRankSum=7.142;DP=297;FS=3.131;HRun=0;HaplotypeScore=151.8036;InbreedingCoeff=0.5527;MQ=69.58;MQ0=2;MQRankSum=-7.811;QD=6.84;ReadPosRankSum=2.344;VQSLOD=3.5759;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:14:3.40:18,3,0	1/1:3,0:3:5.97:46,6,0	0/0:22,0:15:39.13:0,39,564	0/0:21,0:17:48.07:0,48,628	0/0:3,1:4:0:0,0,0	0/0:14,0:14:39.11:0,39,553	0/0:14,0:14:33.07:0,33,429	1/1:12,0:11:19.69:160,20,0	0/0:7,0:7:21.04:0,21,283	1/1:12,0:12:28.17:150,28,0	./.	0/1:16,0:17:2.67:48,0,3	1/1:8,0:8:8.79:56,9,0	1/1:14,0:14:11.90:108,12,0	1/1:9,0:11:2.98:22,3,0	0/1:11,0:11:1.71:15,0,2	1/1:10,0:10:4.83:102,5,0	1/1:3,0:3:8.85:56,9,0	1/1:9,0:9:20.21:127,20,0	./.	0/0:7,0:9:0:0,0,0	./.	0/1:10,0:10:10.60:26,0,11	1/1:13,0:13:2.85:36,3,0	1/1:14,5:19:15.05:243,15,0	1/1:12,0:12:18.48:115,18,0	1/1:5,0:5:5.35:29,5,0	1/1:5,1:6:11.67:96,12,0
chr10	43864949	.	C	CGCGCGT	2319.66	PASS	AB=1.000;AC=32;AF=0.667;AN=48;BaseQRankSum=6.953;DP=209;FS=1.523;HRun=0;HaplotypeScore=107.4566;InbreedingCoeff=0.6068;MQ=74.81;MQ0=2;MQRankSum=-7.853;QD=20.71;ReadPosRankSum=3.717;VQSLOD=2.9054;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:11:3.88:44,4,0	1/1:0,3:3:6.02:205,6,0	0/0:20,0:13:39.13:0,39,919	0/0:20,0:16:48.10:0,48,1097	0/0:3,0:3:0.47:0,0,1	0/0:14,0:14:39.13:0,39,891	0/0:14,0:14:33.10:0,33,720	0/1:4,0:3:6.93:39,0,7	0/0:8,0:8:21.07:0,21,455	1/1:8,0:8:23.64:196,24,0	./.	1/1:3,5:9:9.03:209,9,0	1/1:0,2:2:6.02:178,6,0	1/1:0,5:7:12.04:342,12,0	1/1:2,3:5:3.01:81,3,0	./.	1/1:2,7:9:15.05:457,15,0	1/1:2,0:2:6.02:75,6,0	1/1:4,0:4:8.92:86,9,0	./.	0/0:5,0:5:0.47:0,0,1	./.	1/1:1,5:7:6.02:100,6,0	1/1:0,11:12:3.43:76,3,0	1/1:13,0:13:14.95:124,15,0	1/1:9,0:9:20.07:181,20,0	0/1:3,0:3:2.19:2,0,6	1/1:4,0:3:9.01:84,9,0
chr10	43864952	.	GCACA	G	320.03	PASS	AB=1.000;AC=16;AF=0.421;AN=38;BaseQRankSum=-1.718;DP=256;FS=3.029;HRun=0;HaplotypeScore=113.4865;InbreedingCoeff=0.4271;MQ=61.18;MQ0=3;MQRankSum=-1.238;QD=3.56;ReadPosRankSum=-2.578;VQSLOD=1.9277;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:15:2.34:0,2,32	0/0:3,0:3:1.55:0,2,4	./.	./.	1/1:4,0:4:0.47:1,0,0	1/1:10,2:13:6.91:95,7,0	1/1:12,1:14:6.01:74,6,0	./.	1/1:4,2:9:18.04:220,18,0	0/0:12,0:11:11.96:0,12,122	./.	0/1:10,0:10:3.95:9,0,4	./.	1/1:9,0:9:4.96:20,5,0	0/0:12,0:12:1.11:0,1,29	0/0:5,0:5:1.24:0,1,3	0/0:9,0:9:2.04:0,2,6	./.	1/1:7,0:7:1.65:6,2,0	./.	./.	./.	0/1:8,0:8:2.43:2,0,5	1/1:16,0:14:2.74:12,3,0	0/0:13,0:13:14.79:0,15,103	0/0:11,0:10:5.98:0,6,70	0/0:3,0:3:2.97:0,3,20	0/0:5,0:4:8.90:0,9,67
chr10	43864955	.	C	CGTGT	755.91	PASS	AB=1.000;AC=28;AF=0.538;AN=52;BaseQRankSum=5.592;DP=262;FS=27.627;HRun=0;HaplotypeScore=131.2627;InbreedingCoeff=0.5064;MQ=54.68;MQ0=3;MQRankSum=-2.803;QD=5.01;ReadPosRankSum=-0.211;VQSLOD=0.7894;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:16,0:15:4.41:4,0,20	1/1:3,0:3:6.02:78,6,0	0/0:16,0:9:27.09:0,27,549	0/0:17,0:13:39.13:0,39,752	./.	0/0:12,0:12:33.11:0,33,635	0/0:13,0:13:24.08:0,24,451	0/0:6,0:5:10.21:0,10,56	0/0:10,0:10:24.01:0,24,316	0/0:12,0:11:8.11:0,8,77	./.	1/1:9,1:10:7.62:87,8,0	1/1:3,0:3:8.86:88,9,0	1/1:7,2:9:12.04:173,12,0	1/1:12,0:12:5.23:51,5,0	1/1:7,0:7:8.97:72,9,0	1/1:10,0:10:17.25:177,17,0	0/1:3,0:3:3.33:3,0,3	0/1:9,0:9:3.76:4,0,25	0/1:7,0:7:0.01:0,0,0	0/0:13,0:12:2.76:0,3,23	1/1:7,0:7:3.01:32,3,0	1/1:8,1:9:3.68:53,4,0	1/1:15,1:14:4.04:56,4,0	1/1:13,0:13:9.35:39,9,0	0/1:11,0:10:5.20:5,0,84	0/0:3,0:3:5.96:0,6,44	0/1:6,0:5:3.14:3,0,42
chr10	43865095	.	TCCC	T	802.29	PASS	AB=0.890;AC=14;AF=0.250;AN=56;BaseQRankSum=-0.477;DP=358;FS=8.384;HRun=14;HaplotypeScore=106.4777;InbreedingCoeff=0.5803;MQ=71.97;MQ0=10;MQRankSum=-2.781;QD=4.43;ReadPosRankSum=1.346;VQSLOD=-0.3704;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:24.73:0,25,226	0/0:2,0:2:0:0,0,0	0/1:51,0:21:18.28:18,0,349	0/1:42,0:17:0.01:0,0,162	0/1:13,0:13:6.52:7,0,50	0/0:4,0:3:5.98:0,6,60	0/0:11,0:12:17.94:0,18,187	0/0:9,0:8:8.71:0,9,56	0/0:9,0:9:24.02:0,24,276	0/0:15,0:15:21.05:0,21,226	0/0:7,0:7:8.61:0,9,75	1/1:4,12:16:17.76:223,18,0	1/1:4,3:7:8.53:105,9,0	1/1:2,5:8:15.86:160,16,0	0/0:12,0:12:17.71:0,18,125	0/0:13,0:13:0:0,0,0	0/0:12,0:12:21.06:0,21,255	0/0:10,0:10:24.02:0,24,237	0/0:11,0:10:11.79:0,12,95	0/0:6,0:6:14.26:0,14,108	0/0:11,0:11:5.74:0,6,30	1/1:5,7:12:14.50:140,14,0	0/1:4,7:11:1.21:74,0,1	1/1:6,11:16:20.83:243,21,0	0/0:7,0:6:7.54:0,8,58	0/0:9,0:9:23.97:0,24,232	0/0:10,0:10:24.02:0,24,243	0/0:2,0:2:5.98:0,6,46
chr10	43865096	.	C	CT	3222.27	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=1.541;DP=346;FS=6.913;HRun=1;HaplotypeScore=87.3831;InbreedingCoeff=0.8427;MQ=72.72;MQ0=10;MQRankSum=-4.941;QD=14.26;ReadPosRankSum=4.761;VQSLOD=3.1040;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,6:16:29.87:246,30,0	1/1:1,0:1:2.96:19,3,0	0/0:53,0:20:36.16:0,36,351	0/0:42,0:17:39.76:0,40,320	1/1:6,7:13:26.67:187,27,0	0/0:4,0:3:8.89:0,9,59	0/0:11,0:11:21.69:0,22,163	1/1:9,0:8:16.50:125,16,0	0/0:9,0:9:23.92:0,24,197	1/1:8,6:14:35.87:301,36,0	1/1:4,2:6:11.61:72,12,0	1/1:15,0:15:22.02:127,22,0	1/1:7,0:7:19.38:116,19,0	1/1:7,0:7:14.91:63,15,0	1/1:11,1:12:35.87:287,36,0	1/1:0,13:13:2.94:18,3,0	1/1:9,2:11:26.77:229,27,0	1/1:6,4:10:26.17:235,26,0	1/1:7,2:8:20.91:170,21,0	1/1:3,3:6:17.85:133,18,0	1/1:8,2:10:17.14:122,17,0	1/1:12,0:12:10.20:104,10,0	1/1:10,0:10:8.86:78,9,0	1/1:17,0:16:20.95:94,21,0	1/1:5,2:6:17.76:132,18,0	1/1:4,5:9:26.93:232,27,0	1/1:5,5:10:29.92:254,30,0	1/1:1,1:2:6:54,6,0
chr10	43865099	.	C	CCTT	2031.34	PASS	AB=0.886;AC=23;AF=0.411;AN=56;BaseQRankSum=3.552;DP=369;FS=0.601;HRun=0;HaplotypeScore=118.5462;InbreedingCoeff=0.6752;MQ=70.45;MQ0=10;MQRankSum=-6.040;QD=14.83;ReadPosRankSum=1.715;VQSLOD=3.5847;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:13,5:18:39.80:319,40,0	0/0:1,0:1:3.01:0,3,37	0/0:55,0:19:22.42:0,22,490	0/0:45,0:18:23.78:0,24,271	1/1:11,5:16:24.85:163,25,0	0/0:5,0:4:6.02:0,6,76	0/0:13,0:13:21.85:0,22,286	0/1:8,0:7:7.75:25,0,8	0/0:9,0:9:24.08:0,24,368	0/1:10,5:15:8.08:199,0,8	1/1:5,2:8:12.82:92,13,0	0/0:17,0:17:35.97:0,36,376	0/0:7,0:7:21.06:0,21,269	0/0:7,0:7:18.05:0,18,207	0/0:12,0:12:30.05:0,30,395	0/0:10,0:10:2.90:0,3,16	0/0:11,0:11:26.98:0,27,297	1/1:5,4:10:26.87:309,27,0	0/1:9,1:9:19.17:106,0,19	1/1:9,1:10:24.66:190,25,0	1/1:8,2:10:0.36:40,0,0	0/0:13,0:13:30.01:0,30,335	0/0:10,0:10:18:0,18,213	0/0:17,0:16:24.07:0,24,271	1/1:3,2:5:13.02:94,13,0	1/1:7,4:11:29.53:280,30,0	1/1:7,5:12:35.72:352,36,0	1/1:2,1:3:6.02:65,6,0
chr10	43865100	.	C	CTT	1782.94	PASS	AB=0.980;AC=23;AF=0.411;AN=56;BaseQRankSum=4.045;DP=377;FS=0.600;HRun=0;HaplotypeScore=118.7574;InbreedingCoeff=0.6737;MQ=71.12;MQ0=10;MQRankSum=-5.520;QD=13.01;ReadPosRankSum=1.837;VQSLOD=3.3846;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:18,1:19:40.34:322,40,0	0/0:2,0:2:3.01:0,3,37	0/0:55,0:19:35.38:0,35,483	0/0:47,0:20:21.49:0,21,226	1/1:13,1:15:25.20:147,25,0	0/0:6,0:5:6.02:0,6,77	0/0:13,0:13:25.05:0,25,315	0/1:8,0:7:8.19:24,0,8	0/0:9,0:9:24.08:0,24,373	0/1:15,1:16:9.46:193,0,9	1/1:8,0:8:12.74:80,13,0	0/0:18,0:18:33.84:0,34,260	0/0:7,0:7:20.67:0,21,223	0/0:7,0:7:17.66:0,18,122	0/0:11,0:11:30.05:0,30,407	0/0:9,0:9:2.88:0,3,15	0/0:11,0:11:26.99:0,27,308	1/1:10,0:10:26.36:218,26,0	0/1:10,0:9:18.95:106,0,19	1/1:9,0:10:24.52:145,25,0	1/1:9,0:9:0.65:20,1,0	0/0:14,0:14:29.64:0,30,284	0/0:10,0:10:17.84:0,18,181	0/0:21,0:20:22.91:0,23,161	1/1:6,0:5:13.45:86,13,0	1/1:10,1:11:29.28:261,29,0	1/1:12,0:12:35.29:324,35,0	1/1:3,0:3:6.01:60,6,0
chr10	43865101	.	C	CTT	2970.46	PASS	AB=0.769;AC=25;AF=0.446;AN=56;BaseQRankSum=2.645;DP=375;FS=0.000;HRun=0;HaplotypeScore=113.4673;InbreedingCoeff=0.8378;MQ=70.48;MQ0=10;MQRankSum=-5.833;QD=22.00;ReadPosRankSum=2.108;VQSLOD=4.0757;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:13,5:18:38.35:449,38,0	0/0:2,0:2:6.01:0,6,65	0/0:55,0:19:31.31:0,31,485	0/0:47,0:20:17.79:0,18,223	1/1:10,4:14:25.80:315,26,0	0/0:6,0:5:9.01:0,9,99	0/0:13,0:13:25.72:0,26,338	1/1:3,3:5:8.99:102,9,0	0/0:9,0:9:24.08:0,24,372	1/1:11,5:16:7.74:302,8,0	1/1:8,1:9:12.78:146,13,0	0/0:18,0:18:38.54:0,39,347	0/0:7,0:7:21.03:0,21,258	0/0:7,0:7:17.84:0,18,152	0/0:11,0:11:27.02:0,27,375	0/0:9,0:9:0:0,0,0	0/0:11,0:11:24.01:0,24,286	1/1:7,3:10:25.90:341,26,0	1/1:8,1:8:15.87:203,16,0	1/1:8,2:10:21.86:257,22,0	0/1:7,3:10:13.28:103,0,13	0/0:14,0:14:29.96:0,30,324	0/0:10,0:10:17.98:0,18,193	0/0:21,0:20:23.70:0,24,218	1/1:4,2:5:14.41:169,14,0	1/1:9,3:12:32.12:365,32,0	1/1:9,3:12:32.67:357,33,0	1/1:2,1:3:6.02:74,6,0
chr10	43865110	.	TC	T	1583.83	PASS	AB=0.829;AC=25;AF=0.446;AN=56;BaseQRankSum=-0.036;DP=368;FS=0.000;HRun=14;HaplotypeScore=101.5696;InbreedingCoeff=0.6813;MQ=83.35;MQ0=8;MQRankSum=-1.998;QD=8.52;ReadPosRankSum=2.258;VQSLOD=2.9529;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,19:20:29.46:295,29,0	0/0:1,0:1:3.01:0,3,45	0/1:48,6:24:1.52:2,0,352	0/0:45,3:24:15.27:0,15,347	1/1:1,11:12:11.65:77,12,0	0/0:14,0:13:12.04:0,12,181	0/0:13,0:14:18.06:0,18,273	0/1:4,0:4:1.47:1,0,8	0/0:5,0:5:3.01:0,3,46	1/1:2,11:13:29.93:313,30,0	1/1:0,10:10:6.33:99,6,0	0/0:14,0:14:32.84:0,33,317	0/0:7,0:7:21:0,21,241	0/0:13,0:13:29.91:0,30,329	0/0:9,0:9:3.01:0,3,35	0/0:6,0:6:6.02:0,6,80	0/0:9,0:9:2.60:0,3,10	1/1:2,8:10:12.23:175,12,0	1/1:1,5:5:15.03:168,15,0	1/1:2,8:10:7:108,7,0	1/1:1,9:10:3.78:79,4,0	0/0:10,0:10:17.97:0,18,183	0/0:10,0:10:16.55:0,17,176	0/0:22,0:22:35.75:0,36,299	0/1:2,5:6:1.47:30,0,1	1/1:1,10:11:19.59:208,20,0	1/1:2,12:14:15.43:168,15,0	1/1:1,2:3:6:55,6,0
chr10	43865898	.	AATGAGAGTTCACAGC	A	1637.02	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.855;DP=603;FS=2.173;HRun=0;HaplotypeScore=332.1738;InbreedingCoeff=0.9690;MQ=71.99;MQ0=0;MQRankSum=-3.752;QD=81.85;ReadPosRankSum=-2.584;VQSLOD=2.3217;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:96.33:0,96,6155	0/0:12,0:12:33.11:0,33,2161	0/0:18,0:18:51.18:0,51,2892	0/0:22,0:23:66.23:0,66,3696	0/0:19,0:19:41.81:0,42,2718	0/0:20,0:19:57.20:0,57,3916	0/0:21,0:21:60.21:0,60,4214	1/1:5,15:20:45.14:1732,45,0	0/0:21,0:21:60.17:0,60,3651	0/0:21,0:21:60.21:0,60,3815	0/0:13,0:13:27.09:0,27,1722	0/0:23,0:23:66.23:0,66,4313	0/0:32,0:32:84.29:0,84,4987	0/0:24,0:24:57.16:0,57,3688	0/0:23,0:22:63.22:0,63,3851	0/0:19,0:19:57.20:0,57,3585	0/0:26,0:26:78.27:0,78,5078	0/0:29,0:29:84.29:0,84,5168	0/0:23,0:23:63.22:0,63,3582	0/0:18,0:18:45.15:0,45,2864	0/0:23,0:23:69.24:0,69,4373	0/0:17,0:17:39.13:0,39,2474	0/0:18,0:18:48.16:0,48,2947	0/0:37,0:37:99:0,108,6550	0/0:14,0:14:42.14:0,42,2754	0/0:30,0:30:81.28:0,81,5013	0/0:22,0:22:60.21:0,60,3536	0/0:4,0:4:12.04:0,12,676
chr10	43867023	.	A	AT	17939.12	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=3.952;DP=528;FS=0.000;HRun=2;HaplotypeScore=71.7340;InbreedingCoeff=0.9825;MQ=69.80;MQ0=0;MQRankSum=-3.191;QD=39.17;ReadPosRankSum=2.108;VQSLOD=5.3171;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,29:29:84.28:1209,84,0	1/1:0,6:6:18.06:259,18,0	0/0:7,0:7:21.05:0,21,240	0/0:10,0:10:26.92:0,27,308	1/1:0,35:35:99:1445,102,0	0/0:20,0:20:54.17:0,54,669	0/0:17,0:17:48.15:0,48,595	1/1:5,35:40:99:1491,105,0	0/0:16,0:16:48.15:0,48,595	1/1:1,24:25:72.24:1037,72,0	1/1:1,14:16:45.15:644,45,0	1/1:0,14:14:36.12:518,36,0	1/1:2,15:17:39.13:561,39,0	1/1:0,18:18:51.17:733,51,0	1/1:0,20:20:54.18:777,54,0	1/1:0,13:13:39.13:561,39,0	1/1:0,20:20:54.18:778,54,0	1/1:0,22:22:51.17:734,51,0	1/1:2,17:19:51.17:735,51,0	1/1:0,23:23:60.20:864,60,0	1/1:0,4:4:9.03:130,9,0	1/1:0,8:8:21.07:302,21,0	1/1:1,27:28:81.23:1142,81,0	1/1:0,20:20:51.17:734,51,0	1/1:2,19:21:51.17:734,51,0	1/1:1,25:26:75.25:1080,75,0	1/1:0,20:20:60.20:864,60,0	1/1:0,14:14:42.14:605,42,0
chr10	43867186	.	G	GACATACACACACACACACACAC	8882.26	PASS	AB=0.962;AC=38;AF=0.731;AN=52;BaseQRankSum=6.159;DP=427;FS=8.392;HRun=0;HaplotypeScore=196.4212;InbreedingCoeff=0.7294;MQ=51.21;MQ0=15;MQRankSum=-3.303;QD=33.77;ReadPosRankSum=-2.406;VQSLOD=2.8700;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	1/1:5,0:5:3.48:103,3,0	0/0:16,0:5:14.08:0,14,256	0/0:33,0:19:25.90:0,26,808	1/1:12,0:13:6.02:95,6,0	0/0:20,0:20:44.65:0,45,1869	0/0:18,0:18:38.49:0,38,1664	1/1:18,0:16:39.06:726,39,0	0/0:17,0:17:45.14:0,45,2126	1/1:14,0:14:36.49:1391,36,0	0/1:11,0:12:0:0,0,0	1/1:15,0:12:9.48:128,9,0	1/1:14,0:13:18.53:479,19,0	1/1:14,0:12:15.01:222,15,0	1/1:14,0:14:12.02:206,12,0	./.	1/1:15,0:15:18.06:652,18,0	1/1:0,0:8:3.01:33,3,0	1/1:16,0:15:36.10:1365,36,0	0/1:10,0:9:0:0,0,0	1/1:6,0:6:12.01:147,12,0	1/1:12,0:12:9.01:166,9,0	1/1:22,0:23:15:239,15,0	0/0:2,0:21:0.31:0,0,1	1/1:13,0:13:6.01:75,6,0	1/1:20,0:21:48.16:2123,48,0	1/1:8,0:8:24.06:687,24,0	1/1:1,0:7:3.01:44,3,0
chr10	43867188	.	C	CAT	2127.68	PASS	AB=0.989;AC=31;AF=0.596;AN=52;BaseQRankSum=4.985;DP=403;FS=6.792;HRun=0;HaplotypeScore=112.5484;InbreedingCoeff=0.4815;MQ=50.31;MQ0=15;MQRankSum=0.236;QD=8.03;ReadPosRankSum=-1.140;VQSLOD=2.5342;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:5,0:5:2.87:0,3,18	0/0:15,0:5:12.93:0,13,176	0/0:35,0:19:34.53:0,35,534	1/1:13,0:13:5.59:72,6,0	0/0:20,0:20:45.14:0,45,668	0/0:17,0:17:38.76:0,39,574	0/1:17,0:15:23.93:199,0,24	0/0:17,0:17:45.14:0,45,667	0/1:14,0:14:21.20:239,0,21	0/1:11,0:12:0:0,0,0	1/1:16,0:11:9.48:110,9,0	1/1:11,1:11:14.97:175,15,0	1/1:15,0:13:14.99:134,15,0	1/1:14,0:14:11.97:118,12,0	0/1:14,0:13:0:0,0,0	1/1:14,0:14:0.98:113,1,0	1/1:7,0:7:2.74:12,3,0	0/1:15,0:13:0.07:208,0,0	./.	1/1:8,0:7:11.99:122,12,0	1/1:12,0:12:8.99:95,9,0	1/1:23,0:23:15:167,15,0	0/1:17,0:16:0:0,0,0	1/1:13,0:13:5.99:50,6,0	0/1:21,0:21:2.01:332,0,2	1/1:8,0:8:20.64:143,21,0	0/0:8,0:7:2.04:0,2,6
chr10	43867280	.	A	AAG	19766.39	PASS	AB=0.514;AC=45;AF=0.804;AN=56;BaseQRankSum=0.245;DP=484;FS=1.454;HRun=0;HaplotypeScore=85.7882;InbreedingCoeff=0.8998;MQ=79.03;MQ0=7;MQRankSum=-7.262;QD=51.88;ReadPosRankSum=1.975;VQSLOD=5.7971;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,24:25:57.20:1154,57,0	1/1:0,6:6:18.06:364,18,0	0/0:22,0:19:47.66:0,48,745	0/0:33,0:24:54.09:0,54,709	1/1:2,17:19:53.76:975,54,0	0/0:15,0:15:45.15:0,45,728	0/0:22,0:22:66.18:0,66,1002	1/1:0,30:30:90.28:1736,90,0	0/0:9,0:9:27.09:0,27,440	1/1:1,13:14:39.13:792,39,0	1/1:1,11:13:33.11:669,33,0	1/1:1,17:18:51.18:1032,51,0	1/1:0,14:14:36.12:729,36,0	1/1:0,12:12:27.09:547,27,0	1/1:2,19:19:54.14:1054,54,0	0/1:1,16:18:6.80:748,0,7	1/1:0,19:19:54.12:1051,54,0	1/1:0,8:8:24.08:487,24,0	1/1:2,22:24:66.21:1257,66,0	1/1:0,9:9:24.08:487,24,0	1/1:0,17:15:39.13:790,39,0	1/1:0,7:8:21.07:376,21,0	1/1:0,19:19:54.19:1091,54,0	1/1:1,18:19:45.13:910,45,0	1/1:0,24:24:69.24:1398,69,0	1/1:0,16:16:45.13:842,45,0	1/1:0,16:16:45.15:913,45,0	1/1:0,8:8:18.06:365,18,0
chr10	43868048	.	GAAGAGA	G	24918.99	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=10.892;DP=628;FS=14.876;HRun=0;HaplotypeScore=210.0267;InbreedingCoeff=0.9950;MQ=55.06;MQ0=7;MQRankSum=-12.401;QD=57.55;ReadPosRankSum=5.328;VQSLOD=3.7550;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,23:27:69.23:1547,69,0	1/1:3,6:9:24.04:450,24,0	0/0:51,0:33:68.62:0,69,2023	0/0:67,0:35:80.06:0,80,1867	1/1:1,12:13:30.10:733,30,0	0/0:26,0:26:74.65:0,75,2441	0/0:25,0:25:75.26:0,75,2420	1/1:4,29:33:87.28:1809,87,0	0/0:25,0:25:72.22:0,72,2391	1/1:2,17:19:51.17:1222,51,0	1/1:0,9:9:27.09:616,27,0	1/1:5,19:24:60.20:1434,60,0	1/1:3,20:23:63.22:1513,63,0	1/1:3,16:19:51.18:1233,51,0	1/1:6,31:37:93.32:2264,93,0	1/1:9,26:35:90.30:2060,90,0	1/1:4,14:18:36.12:844,36,0	1/1:4,9:13:22.43:655,22,0	1/1:2,9:10:21.07:516,21,0	1/1:4,16:20:48.16:1070,48,0	1/1:3,16:19:37.68:813,38,0	1/1:3,16:19:48.16:1052,48,0	1/1:3,5:8:18.06:402,18,0	1/1:3,13:16:36.10:877,36,0	1/1:1,11:12:30.57:699,31,0	1/1:3,16:19:48.15:1132,48,0	1/1:2,20:21:60.20:1387,60,0	1/1:0,8:8:24.08:590,24,0
chr10	43868051	.	GAGA	G	9983.18	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=12.768;DP=581;FS=24.502;HRun=0;HaplotypeScore=213.2961;InbreedingCoeff=0.9941;MQ=54.53;MQ0=6;MQRankSum=-13.072;QD=25.53;ReadPosRankSum=4.469;VQSLOD=3.4229;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:28,1:29:75.09:759,75,0	1/1:6,1:7:18.02:169,18,0	0/0:51,0:32:49.19:0,49,1199	0/0:63,0:33:78.54:0,79,1187	1/1:13,0:13:30:265,30,0	0/0:26,0:26:63.11:0,63,1293	0/0:24,0:24:63.22:0,63,1331	1/1:29,0:29:78.09:810,78,0	0/0:24,0:24:69.22:0,69,1426	1/1:18,0:18:51.05:491,51,0	1/1:9,0:9:26.99:242,27,0	1/1:19,1:20:60.05:554,60,0	1/1:20,1:21:63.04:575,63,0	1/1:17,0:17:51.02:464,51,0	1/1:31,0:31:93.04:837,93,0	1/1:26,4:30:90.07:841,90,0	1/1:14,0:14:33.01:293,33,0	1/1:9,1:10:30.03:290,30,0	1/1:9,0:8:21.02:197,21,0	1/1:17,1:18:45.04:423,45,0	1/1:20,0:20:40.59:391,41,0	1/1:16,2:18:47.96:443,48,0	1/1:5,1:6:18.01:168,18,0	1/1:14,0:14:35.66:302,36,0	1/1:12,0:12:29.94:258,30,0	1/1:16,0:16:45.03:411,45,0	1/1:21,1:21:60.06:586,60,0	1/1:8,0:8:24.01:215,24,0
chr10	43868132	.	AT	A	19939.43	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=13.836;DP=631;FS=0.000;HRun=1;HaplotypeScore=161.2435;InbreedingCoeff=0.9988;MQ=78.20;MQ0=3;MQRankSum=-7.213;QD=38.57;ReadPosRankSum=5.642;VQSLOD=4.0794;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,47:47:99:1800,132,0	1/1:0,11:11:33.11:461,33,0	0/0:25,0:24:69.23:0,69,1103	0/0:23,0:22:51.21:0,51,897	1/1:0,13:13:36.12:503,36,0	0/0:22,0:22:66.21:0,66,1028	0/0:21,0:21:60.20:0,60,956	1/1:0,34:34:99:1426,102,0	0/0:23,0:23:69.22:0,69,1077	1/1:0,25:25:69.23:965,69,0	1/1:0,19:18:48.12:649,48,0	1/1:0,20:20:60.09:775,60,0	1/1:0,19:19:51.17:713,51,0	1/1:0,21:21:60.17:818,60,0	1/1:0,41:41:99:1488,108,0	1/1:0,31:31:87.29:1216,87,0	1/1:0,22:22:63.21:881,63,0	1/1:0,11:11:33.11:461,33,0	1/1:0,12:12:36.10:485,36,0	1/1:1,20:20:57.19:797,57,0	1/1:2,28:30:84.27:1157,84,0	1/1:0,31:31:81.22:1110,81,0	1/1:0,20:20:60.20:839,60,0	1/1:0,26:26:69.05:920,69,0	1/1:0,11:11:33.11:461,33,0	1/1:0,17:17:48.16:672,48,0	1/1:0,28:27:78.22:1069,78,0	1/1:0,7:7:21.04:273,21,0
chr10	43869094	.	TA	T	11354.09	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=12.937;DP=586;FS=10.103;HRun=9;HaplotypeScore=142.1592;InbreedingCoeff=0.9988;MQ=64.72;MQ0=1;MQRankSum=-8.459;QD=23.22;ReadPosRankSum=0.326;VQSLOD=3.4191;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,22:23:54.02:490,54,0	1/1:1,7:8:21.01:192,21,0	0/0:25,2:20:36.09:0,36,403	0/0:14,0:12:33.10:0,33,376	1/1:4,28:32:77.89:682,78,0	0/0:22,0:22:63.18:0,63,719	0/0:13,0:13:36.11:0,36,415	1/1:3,29:33:89:780,89,0	0/0:20,0:20:54.15:0,54,615	1/1:0,25:25:75.01:673,75,0	1/1:3,17:20:45.01:409,45,0	1/1:2,18:20:54.02:490,54,0	1/1:1,17:18:51.03:466,51,0	1/1:4,15:19:45.01:411,45,0	1/1:2,19:21:57.02:519,57,0	1/1:1,19:20:53.99:486,54,0	1/1:3,19:22:54.01:493,54,0	1/1:1,20:21:51.03:466,51,0	1/1:2,18:20:57:514,57,0	1/1:2,25:28:74.03:655,74,0	1/1:2,15:17:45.02:411,45,0	1/1:2,15:17:41.97:375,42,0	1/1:3,14:17:35.96:320,36,0	1/1:3,13:16:35.94:317,36,0	1/1:3,18:21:54.03:493,54,0	1/1:3,21:24:53.98:489,54,0	1/1:1,35:36:99:921,102,0	1/1:0,11:11:33.02:302,33,0
chr10	43869327	.	GTGCTGCTGTCTC	G	11680.82	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=10.933;DP=612;FS=22.670;HRun=0;HaplotypeScore=248.3496;InbreedingCoeff=0.9931;MQ=69.64;MQ0=0;MQRankSum=-13.666;QD=86.52;ReadPosRankSum=2.697;VQSLOD=3.4878;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,111,6204	0/0:7,0:7:15.05:0,15,897	0/0:11,0:11:30.04:0,30,1279	0/0:13,0:13:33.06:0,33,1279	0/0:16,0:16:45.14:0,45,2465	0/0:20,0:20:60.19:0,60,3454	0/0:16,0:16:48.16:0,48,2700	0/0:31,0:31:84.21:0,84,3836	0/0:30,0:29:84.27:0,84,4984	0/0:25,0:25:75.19:0,75,3590	0/0:22,0:22:66.23:0,66,3863	1/1:0,21:22:54.19:2082,54,0	1/1:0,19:19:48.16:1850,48,0	1/1:0,17:17:42.14:1611,42,0	1/1:5,15:20:53.22:1681,53,0	1/1:6,18:24:63.15:2154,63,0	0/0:32,0:32:96.24:0,96,5153	0/0:26,0:26:75.26:0,75,4472	0/0:20,0:20:60.20:0,60,3221	0/0:21,0:21:60.18:0,60,3256	0/0:40,0:40:99:0,114,5889	1/1:5,13:18:39.06:1227,39,0	1/1:0,7:7:15.05:578,15,0	1/1:4,4:8:17.93:498,18,0	0/0:28,0:28:75.22:0,75,3916	0/0:18,0:18:54.16:0,54,2918	0/0:48,0:48:99:0,141,8616	0/0:11,0:11:30.10:0,30,1876
chr10	43869381	.	CA	C	10687.99	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=5.227;DP=476;FS=0.000;HRun=6;HaplotypeScore=118.8109;InbreedingCoeff=0.9610;MQ=68.64;MQ0=0;MQRankSum=-8.491;QD=26.00;ReadPosRankSum=1.769;VQSLOD=3.7683;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,26:27:60.14:644,60,0	1/1:0,5:5:9.02:97,9,0	0/0:10,0:10:23.82:0,24,257	0/0:12,0:13:17.07:0,17,239	1/1:2,13:15:33.08:354,33,0	0/0:15,0:15:45.15:0,45,592	0/0:11,0:11:27.05:0,27,335	1/1:4,32:36:93.23:999,93,0	0/0:16,0:16:42.14:0,42,552	1/1:2,20:22:53.87:580,54,0	1/1:5,13:18:33.08:355,33,0	1/1:2,20:22:57.14:612,57,0	1/1:2,13:15:36.09:386,36,0	1/1:5,10:15:27.06:290,27,0	1/1:0,20:20:60.15:644,60,0	1/1:2,20:22:60.15:644,60,0	1/1:3,18:21:48.12:516,48,0	1/1:0,14:14:39.10:419,39,0	1/1:2,20:22:60.14:637,60,0	1/1:1,13:14:36.09:387,36,0	1/1:4,12:16:33.08:355,33,0	1/1:0,16:16:36.09:386,36,0	1/1:2,5:7:9.02:97,9,0	1/1:0,7:7:12.03:129,12,0	1/1:3,16:19:39.10:419,39,0	1/1:3,14:17:42.10:451,42,0	1/1:1,34:35:99:1095,102,0	1/1:0,6:6:18.05:193,18,0
chr10	43869552	.	CACTTA	C	14283.90	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=9.543;DP=343;FS=7.921;HRun=0;HaplotypeScore=93.4256;InbreedingCoeff=0.9548;MQ=83.14;MQ0=0;MQRankSum=-13.240;QD=59.27;ReadPosRankSum=2.930;VQSLOD=5.4100;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,17:17:45.15:1025,45,0	1/1:0,7:7:18.06:419,18,0	0/0:18,0:18:54.18:0,54,1606	0/0:19,0:20:44.72:0,45,1167	1/1:0,13:13:36.12:780,36,0	0/0:28,0:27:84.27:0,84,2681	0/0:24,0:24:72.23:0,72,2246	1/1:0,16:16:48.16:1117,48,0	0/0:12,0:12:36.12:0,36,1137	1/1:0,17:17:51.16:1080,51,0	1/1:0,7:7:18.06:418,18,0	1/1:0,6:6:18.06:419,18,0	1/1:0,12:12:33.11:764,33,0	1/1:0,7:7:18.06:402,18,0	1/1:0,12:12:30.10:698,30,0	1/1:0,11:11:27.09:628,27,0	1/1:0,5:5:15.05:349,15,0	1/1:0,7:7:15.05:349,15,0	1/1:0,10:10:30.10:697,30,0	1/1:0,10:10:21.06:488,21,0	1/1:0,8:8:18.06:418,18,0	1/1:0,9:9:21.07:470,21,0	1/1:0,19:19:42.14:975,42,0	1/1:0,6:6:9.03:169,9,0	1/1:0,13:13:36.12:821,36,0	1/1:0,16:16:48.13:978,48,0	1/1:0,10:10:27.09:610,27,0	1/1:0,3:3:9.03:209,9,0
chr10	43870104	.	A	ACTATAGGACT	60713.59	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-6.884;DP=724;FS=7.708;HRun=0;HaplotypeScore=186.9411;InbreedingCoeff=0.9917;MQ=74.96;MQ0=0;MQRankSum=-16.144;QD=101.87;ReadPosRankSum=3.621;VQSLOD=4.5740;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,21:33:48.14:2406,48,0	1/1:0,11:11:27.09:1434,27,0	0/0:27,0:27:56.36:0,56,1727	0/0:20,0:20:57.18:0,57,1640	1/1:9,20:33:48.16:2520,48,0	0/0:28,0:28:78.27:0,78,2525	0/0:23,0:23:66.18:0,66,1851	1/1:22,21:43:99:5378,120,0	0/0:30,0:30:84.27:0,84,2537	1/1:7,23:30:90.27:4151,90,0	1/1:6,19:29:63.22:3154,63,0	1/1:7,16:26:60.20:2795,60,0	1/1:3,18:24:39.13:1941,39,0	1/1:6,22:31:63.22:3209,63,0	1/1:9,25:38:86.99:4428,87,0	1/1:6,17:26:57.19:2725,57,0	1/1:4,10:19:36.12:1688,36,0	1/1:3,8:12:30.10:1342,30,0	1/1:5,9:15:45.13:1795,45,0	1/1:10,29:43:81.28:4110,81,0	1/1:5,12:19:26.66:1411,27,0	1/1:11,23:38:57.20:2911,57,0	1/1:4,17:23:54.18:2723,54,0	1/1:6,6:14:24.07:1113,24,0	1/1:3,19:23:45.15:2393,45,0	1/1:11,22:34:90.31:4380,90,0	1/1:4,14:24:39.13:2069,39,0	1/1:0,5:7:12.04:639,12,0
chr10	43871726	.	TGTAAA	T	11938.94	PASS	AB=0.512;AC=23;AF=0.411;AN=56;BaseQRankSum=11.623;DP=645;FS=8.126;HRun=0;HaplotypeScore=136.2921;InbreedingCoeff=0.9216;MQ=82.41;MQ0=0;MQRankSum=-11.634;QD=56.32;ReadPosRankSum=2.117;VQSLOD=5.5127;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,34:35:90.31:1977,90,0	0/0:14,0:14:42.14:0,42,1352	0/0:17,0:17:51.18:0,51,1580	0/0:27,0:27:69.24:0,69,1906	1/1:1,10:11:30.10:666,30,0	0/0:20,0:20:60.21:0,60,1936	0/0:23,0:23:66.23:0,66,2048	0/0:31,0:31:93.32:0,93,3006	0/0:20,0:20:60.21:0,60,1913	1/1:1,22:23:66.21:1405,66,0	1/1:1,11:12:33.07:689,33,0	0/0:38,0:38:99:0,111,3402	0/0:22,0:22:66.23:0,66,2075	0/0:34,0:34:99:0,99,3066	0/0:37,0:37:99:0,111,3473	0/0:37,0:37:99:0,99,3145	0/0:31,0:31:93.32:0,93,2848	0/1:1,20:21:36.75:1211,0,37	1/1:4,11:15:33.09:692,33,0	1/1:0,13:13:36.12:802,36,0	1/1:2,24:26:57.15:1220,57,0	0/0:23,0:23:66.23:0,66,2131	0/0:23,0:23:66.23:0,66,2130	0/0:36,0:36:99:0,105,3297	1/1:1,15:16:39.13:869,39,0	1/1:1,19:20:54.19:1204,54,0	1/1:2,13:15:42.14:936,42,0	1/1:0,5:5:12.04:268,12,0
chr10	43871830	.	C	CCGG	25746.14	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=7.245;DP=634;FS=1.716;HRun=0;HaplotypeScore=155.9833;InbreedingCoeff=0.9945;MQ=85.40;MQ0=0;MQRankSum=-12.833;QD=51.39;ReadPosRankSum=1.217;VQSLOD=6.5647;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,20:28:66.23:1436,66,0	1/1:2,8:10:24.08:551,24,0	0/0:26,0:26:69.21:0,69,1134	0/0:28,0:28:57.44:0,57,975	1/1:2,18:21:42.61:943,43,0	0/0:24,0:24:66.23:0,66,1160	0/0:35,0:35:99:0,102,1768	1/1:10,13:25:57.18:1257,57,0	0/0:20,0:20:57.20:0,57,1006	1/1:6,20:26:75.25:1703,75,0	1/1:1,11:12:27.09:635,27,0	1/1:1,0:34:93.10:1551,93,0	1/1:2,0:21:51.17:889,51,0	1/1:0,0:35:84.29:1466,84,0	1/1:4,0:29:84.20:1456,84,0	1/1:1,0:26:78.27:1421,78,0	1/1:5,35:40:99:2404,102,0	1/1:2,10:12:33.11:776,33,0	1/1:5,10:15:39.13:852,39,0	1/1:2,7:9:18.06:422,18,0	1/1:13,14:26:42.10:861,42,0	1/1:1,0:20:51.17:879,51,0	1/1:0,0:7:21.07:362,21,0	1/1:1,0:32:75.26:1249,75,0	1/1:2,11:13:36.08:759,36,0	1/1:8,23:31:90.27:2049,90,0	1/1:4,18:22:63.22:1450,63,0	1/1:2,4:6:18.06:374,18,0
chr10	43871838	.	AAC	A	9992.66	PASS	AB=0.542;AC=27;AF=0.482;AN=56;BaseQRankSum=11.388;DP=598;FS=3.231;HRun=0;HaplotypeScore=176.6243;InbreedingCoeff=0.9232;MQ=85.47;MQ0=1;MQRankSum=-16.397;QD=38.29;ReadPosRankSum=0.271;VQSLOD=5.4373;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,22:24:63.21:962,63,0	0/0:10,0:10:30.09:0,30,541	0/0:26,0:27:74.92:0,75,1304	0/0:24,0:24:53.73:0,54,852	1/1:2,15:17:36.11:549,36,0	0/0:22,0:22:60.19:0,60,1125	0/0:33,0:33:96.31:0,96,1802	0/0:29,0:29:81.24:0,81,1514	0/0:21,0:21:57.18:0,57,1067	1/1:2,21:23:63.21:957,63,0	1/1:0,8:8:21.07:320,21,0	0/0:35,0:35:87.30:0,87,1669	0/0:18,0:18:51.17:0,51,970	0/0:27,0:27:68.97:0,69,1271	1/1:1,30:31:87.30:1329,87,0	1/1:0,25:25:69.23:1054,69,0	0/0:34,0:34:96.28:0,96,1782	0/1:2,11:13:24.56:426,0,25	1/1:2,12:14:39.06:538,39,0	1/1:0,8:8:21.03:295,21,0	1/1:3,21:23:42.13:642,42,0	0/0:20,0:20:51.16:0,51,937	0/0:6,0:6:15.05:0,15,284	0/0:31,0:31:72.90:0,73,1409	1/1:0,14:14:39.13:596,39,0	1/1:2,29:31:81.26:1216,81,0	1/1:1,22:23:62.78:903,63,0	1/1:2,4:6:15.04:208,15,0
chr10	43872037	.	AG	A	1039.12	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.703;DP=718;FS=10.421;HRun=6;HaplotypeScore=75.1755;InbreedingCoeff=0.9976;MQ=85.55;MQ0=0;MQRankSum=-0.723;QD=28.08;ReadPosRankSum=-0.216;VQSLOD=3.5960;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:93.29:0,93,1202	1/1:0,10:10:30.08:322,30,0	0/0:27,0:28:62.26:0,62,832	0/0:24,0:24:66.07:0,66,792	0/0:28,0:28:66.21:0,66,866	0/0:19,0:19:54.18:0,54,711	0/0:18,0:18:45.15:0,45,592	0/0:27,0:27:63.18:0,63,799	0/0:24,0:24:69.22:0,69,908	0/0:25,0:25:72.19:0,72,922	0/0:21,0:21:48.14:0,48,605	0/0:28,0:28:84.22:0,84,1083	0/0:22,0:22:63.15:0,63,806	0/0:27,0:27:78.25:0,78,1026	0/0:22,0:22:66.21:0,66,855	0/0:39,0:39:99:0,111,1410	1/1:0,27:27:78.20:838,78,0	0/0:18,0:18:48.12:0,48,613	0/0:19,0:19:51.16:0,51,658	0/0:29,0:29:75.23:0,75,955	0/0:40,0:40:99:0,114,1499	0/0:37,0:37:99:0,102,1323	0/0:27,0:27:72.23:0,72,946	0/0:35,0:35:90.25:0,90,1165	0/0:23,0:23:63.20:0,63,828	0/0:28,0:28:81.69:0,82,1032	0/0:32,0:32:84.27:0,84,1097	0/0:7,0:7:21.07:0,21,276
chr10	43872369	.	CT	C	698.56	PASS	AB=0.872;AC=18;AF=0.321;AN=56;BaseQRankSum=6.298;DP=419;FS=1.179;HRun=16;HaplotypeScore=57.4319;InbreedingCoeff=0.6325;MQ=75.58;MQ0=3;MQRankSum=0.915;QD=4.21;ReadPosRankSum=5.098;VQSLOD=0.4726;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:24:27.91:0,28,201	0/0:4,0:4:11.80:0,12,82	0/0:17,1:13:17.65:0,18,121	0/1:14,0:10:1.04:1,0,34	1/1:9,0:10:2.84:18,3,0	0/0:12,0:12:23.79:0,24,179	0/0:19,0:21:29.75:0,30,229	0/1:15,5:18:9.03:9,0,35	0/0:12,0:17:26.80:0,27,212	0/0:10,0:13:11.60:0,12,67	0/0:6,0:6:8.99:0,9,76	1/1:4,10:14:26.47:161,26,0	1/1:7,2:9:8.73:52,9,0	1/1:4,10:14:11.58:114,12,0	0/0:11,1:11:11.86:0,12,199	0/0:7,0:7:17.79:0,18,132	0/0:12,0:29:36.09:0,36,223	0/0:25,0:25:42.97:0,43,332	0/1:13,2:17:15.09:15,0,140	0/0:14,0:17:16.21:0,16,164	0/1:17,3:20:27.30:27,0,99	1/1:8,9:17:17.56:107,18,0	1/1:3,6:9:17.64:107,18,0	1/1:5,15:21:46.63:275,47,0	0/0:9,0:9:17.90:0,18,141	0/0:14,0:14:15.83:0,16,120	0/0:12,0:13:23.74:0,24,178	0/0:11,0:11:31.28:0,31,227
chr10	43872581	.	T	TC	1366.32	PASS	AB=0.987;AC=35;AF=0.673;AN=52;BaseQRankSum=4.897;DP=357;FS=8.578;HRun=2;HaplotypeScore=117.3064;InbreedingCoeff=0.2182;MQ=30.16;MQ0=26;MQRankSum=-2.007;QD=6.44;ReadPosRankSum=4.129;VQSLOD=0.5565;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:12:6.78:89,7,0	./.	0/0:60,0:4:8.99:0,9,97	0/0:71,0:12:21.01:0,21,263	0/0:4,0:3:1.82:0,2,5	1/1:6,1:7:7.21:25,7,0	0/1:14,0:11:1.50:4,0,2	0/1:21,0:18:90.20:90,0,94	1/1:6,0:6:4.87:17,5,0	0/1:6,0:6:8.89:9,0,49	0/1:5,0:5:3.29:30,0,3	1/1:9,0:8:15.79:125,16,0	1/1:13,0:12:28.49:209,28,0	0/1:13,2:14:9.09:230,0,9	1/1:12,0:10:22.61:104,23,0	1/1:13,0:12:27.65:107,28,0	0/0:7,1:4:4.02:0,4,18	0/1:5,0:5:23.14:23,0,23	0/1:8,0:5:1.51:2,0,11	./.	0/1:11,0:9:2.40:16,0,2	1/1:15,1:11:25.42:194,25,0	1/1:12,3:13:4.94:109,5,0	1/1:10,1:10:4.99:83,5,0	0/1:5,0:5:0.04:0,0,31	1/1:5,0:5:7.63:21,8,0	1/1:1,0:1:1.82:5,2,0	1/1:1,0:1:2.98:22,3,0
chr10	43872582	.	CTT	C	2922.48	PASS	AB=0.829;AC=45;AF=0.865;AN=52;BaseQRankSum=3.409;DP=343;FS=2.797;HRun=2;HaplotypeScore=110.6431;InbreedingCoeff=0.3104;MQ=30.15;MQ0=22;MQRankSum=-0.627;QD=13.98;ReadPosRankSum=1.455;VQSLOD=1.0719;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:12,0:11:24.71:181,25,0	./.	0/0:61,0:4:8.76:0,9,112	0/0:73,0:12:23.46:0,23,344	1/1:3,0:3:4.08:13,4,0	1/1:7,0:7:14.91:116,15,0	1/1:11,1:10:5.94:45,6,0	1/1:15,2:15:15.99:111,16,0	1/1:6,0:6:5.73:52,6,0	1/1:5,0:5:3.01:40,3,0	0/1:4,0:5:11.94:12,0,14	1/1:3,6:8:24.05:304,24,0	1/1:8,5:12:29.81:318,30,0	0/1:7,8:14:16.43:336,0,16	1/1:9,2:9:19.59:170,20,0	1/1:10,1:10:28.26:259,28,0	1/1:6,2:4:3.63:14,4,0	1/1:5,0:5:11.90:89,12,0	1/1:7,0:5:11.44:75,11,0	1/1:2,0:2:2.94:18,3,0	1/1:7,2:9:11.15:66,11,0	1/1:9,6:10:26.62:292,27,0	1/1:9,5:12:23.20:208,23,0	1/1:9,1:9:20.44:163,20,0	0/1:4,1:5:11:56,0,11	1/1:5,0:5:11.98:97,12,0	1/1:1,0:1:2.99:24,3,0	./.
chr10	43872584	.	T	TC	3527.96	PASS	AB=0.812;AC=42;AF=0.808;AN=52;BaseQRankSum=3.146;DP=345;FS=0.000;HRun=1;HaplotypeScore=120.3247;InbreedingCoeff=0.3468;MQ=29.84;MQ0=22;MQRankSum=-2.182;QD=17.38;ReadPosRankSum=2.951;VQSLOD=3.9617;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,6:11:12.69:280,13,0	./.	0/0:61,1:4:8.97:0,9,96	0/0:75,0:12:22.53:0,23,267	1/1:1,3:4:2.58:10,3,0	1/1:2,6:8:14.94:172,15,0	1/1:6,7:11:5.95:63,6,0	1/1:13,0:11:0.96:117,1,0	1/1:0,5:5:6.02:90,6,0	0/0:4,1:5:5.99:0,6,53	1/1:3,2:5:5.42:33,5,0	1/1:9,1:9:18.53:195,19,0	1/1:9,3:12:26.93:299,27,0	0/1:11,2:12:10.06:246,0,10	1/1:4,7:9:23.60:277,24,0	1/1:2,9:10:27.09:402,27,0	0/1:8,0:4:0.91:29,0,1	0/1:3,3:6:4.72:170,0,5	1/1:3,4:5:12.02:143,12,0	1/1:1,1:2:2.94:18,3,0	0/1:6,4:9:2.13:48,0,2	1/1:12,3:10:26.99:311,27,0	1/1:13,1:13:19.85:180,20,0	1/1:8,2:9:5.46:124,5,0	1/1:3,2:5:8.92:77,9,0	1/1:1,5:6:15.01:199,15,0	1/1:1,1:2:3.01:45,3,0	./.
chr10	43872588	.	T	TC	669.32	PASS	AB=0.925;AC=15;AF=0.278;AN=54;BaseQRankSum=0.678;DP=329;FS=3.123;HRun=1;HaplotypeScore=120.9719;InbreedingCoeff=0.0185;MQ=29.27;MQ0=22;MQRankSum=0.295;QD=5.62;ReadPosRankSum=3.128;VQSLOD=0.8479;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:6,4:10:75.28:174,0,75	./.	0/0:64,0:4:8.61:0,9,81	0/0:76,0:12:19.96:0,20,272	0/0:6,0:6:2.02:0,2,6	0/0:8,0:8:15.03:0,15,165	0/0:13,0:11:9.01:0,9,91	1/1:5,1:4:9.03:122,9,0	0/1:5,0:5:2.68:3,0,22	0/0:2,0:2:3.01:0,3,40	0/0:3,0:3:2.89:0,3,16	0/1:9,0:9:17.92:18,0,52	1/1:13,0:12:13.20:97,13,0	0/1:15,0:14:50.76:74,0,51	0/1:9,2:9:71.97:72,0,114	0/0:11,0:10:3.03:0,3,202	0/0:6,0:2:2.04:0,2,6	0/1:5,0:5:14.97:15,0,91	0/0:5,0:3:5.69:0,6,67	0/0:2,1:3:3.01:0,3,41	0/1:8,2:9:17.48:36,0,17	0/1:13,1:10:34.50:76,0,35	0/1:12,0:10:3.23:57,0,3	1/1:8,1:8:2.15:69,2,0	0/0:4,0:4:5.85:0,6,55	0/0:6,0:6:15.04:0,15,168	0/0:2,0:2:6.02:0,6,72	0/0:1,0:1:0:0,0,0
chr10	43872595	.	T	TC	4328.33	PASS	AB=0.667;AC=45;AF=0.833;AN=54;BaseQRankSum=2.724;DP=333;FS=1.290;HRun=2;HaplotypeScore=124.5055;InbreedingCoeff=0.5396;MQ=32.10;MQ0=19;MQRankSum=-0.548;QD=24.32;ReadPosRankSum=2.325;VQSLOD=4.8343;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,4:8:21.06:260,21,0	./.	0/0:64,0:5:8.93:0,9,82	0/0:81,0:12:23.25:0,23,209	1/1:0,6:6:10.97:120,11,0	1/1:2,8:10:21.07:314,21,0	1/1:0,11:11:12.04:179,12,0	0/0:3,0:2:0.47:0,0,1	1/1:1,5:6:9.03:135,9,0	1/1:0,3:3:6.02:90,6,0	0/1:1,1:2:0:0,0,0	1/1:8,1:10:7.99:214,8,0	1/1:9,1:12:27.06:299,27,0	1/1:9,4:13:36.09:456,36,0	1/1:3,9:10:21:313,21,0	1/1:3,10:12:30.99:450,31,0	0/0:6,0:3:0.51:0,1,3	1/1:1,6:7:20.95:253,21,0	1/1:1,2:2:5.99:66,6,0	1/1:1,2:3:6.02:89,6,0	1/1:5,5:8:0.52:56,1,0	1/1:11,4:12:29.62:273,30,0	1/1:8,3:10:14.15:161,14,0	1/1:4,2:7:4.17:126,4,0	1/1:1,3:4:9.02:116,9,0	1/1:0,6:6:15.05:224,15,0	1/1:0,2:2:6.02:90,6,0	1/1:0,1:1:3.01:45,3,0
chr10	43872596	.	C	CT	3163.85	PASS	AB=1.000;AC=43;AF=0.827;AN=52;BaseQRankSum=2.765;DP=334;FS=0.000;HRun=1;HaplotypeScore=131.0672;InbreedingCoeff=0.5160;MQ=32.14;MQ0=19;MQRankSum=-0.657;QD=17.68;ReadPosRankSum=2.974;VQSLOD=3.9661;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,2:9:21.03:230,21,0	./.	0/0:63,2:5:8.80:0,9,96	0/0:79,0:12:20.74:0,21,208	1/1:6,0:6:10.84:78,11,0	1/1:9,0:9:20.99:178,21,0	1/1:13,0:13:12:105,12,0	0/0:1,0:1:0.47:0,0,1	1/1:6,0:6:8.99:76,9,0	1/1:4,0:4:6.46:51,6,0	./.	1/1:5,3:10:29.37:288,29,0	1/1:6,2:12:23.96:287,24,0	1/1:7,1:12:36.09:423,36,0	1/1:11,1:10:17.69:174,18,0	1/1:12,1:12:26.35:249,26,0	0/0:5,0:3:1.77:0,2,6	1/1:6,1:7:19.40:155,19,0	1/1:2,0:1:3:25,3,0	1/1:3,0:3:5.78:52,6,0	0/1:9,0:8:11.39:15,0,11	1/1:8,6:14:28.73:310,29,0	1/1:6,3:9:17.46:189,17,0	1/1:5,2:8:4.54:111,5,0	1/1:4,0:4:9.01:97,9,0	1/1:6,0:6:14.99:127,15,0	1/1:2,0:2:5.99:49,6,0	1/1:1,0:1:3:26,3,0
chr10	43872597	.	TCTTCCTC	T	4668.21	PASS	AB=1.000;AC=46;AF=0.852;AN=54;BaseQRankSum=2.417;DP=336;FS=2.866;HRun=0;HaplotypeScore=142.9033;InbreedingCoeff=0.5336;MQ=32.22;MQ0=18;MQRankSum=0.391;QD=24.44;ReadPosRankSum=1.095;VQSLOD=4.8208;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:9,0:9:18.31:279,18,0	./.	0/0:64,0:5:8.99:0,9,112	0/0:78,0:11:23.71:0,24,429	1/1:6,0:6:13.11:128,13,0	1/1:9,0:9:21.71:126,22,0	1/1:14,0:14:13.57:153,14,0	0/0:2,0:1:2.04:0,2,6	1/1:6,0:6:7.95:54,8,0	0/1:4,0:4:4.22:79,0,4	1/1:2,0:2:3.01:32,3,0	1/1:8,1:9:27.03:414,27,0	1/1:10,1:11:26.88:508,27,0	1/1:11,2:12:36.11:612,36,0	1/1:12,0:10:23.73:219,24,0	1/1:16,0:15:43.98:342,44,0	1/1:5,0:3:8.75:79,9,0	1/1:8,0:8:11.95:118,12,0	1/1:2,0:1:2.37:8,2,0	1/1:3,0:3:8.18:53,8,0	1/1:10,0:8:15.99:150,16,0	1/1:18,0:14:20.20:453,20,0	1/1:9,2:9:20.90:293,21,0	1/1:8,0:8:21.06:321,21,0	1/1:6,0:6:14.04:129,14,0	1/1:6,0:6:6.58:97,7,0	0/1:2,0:2:0.41:4,0,0	1/1:1,0:1:2.94:18,3,0
chr10	43872600	.	TCC	T	371.32	PASS	AB=0.954;AC=22;AF=0.407;AN=54;BaseQRankSum=2.334;DP=341;FS=3.571;HRun=2;HaplotypeScore=149.1363;InbreedingCoeff=0.1346;MQ=37.81;MQ0=17;MQRankSum=0.435;QD=1.88;ReadPosRankSum=0.301;VQSLOD=-0.6539;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:7,2:9:55.02:82,0,55	./.	0/1:58,0:5:5.82:16,0,6	0/0:72,0:12:18.09:0,18,247	0/1:6,0:6:6.01:6,0,11	0/0:9,0:9:14.40:0,14,169	0/0:14,0:14:20.80:0,21,182	0/1:2,0:1:0:0,0,0	0/0:6,0:6:8.47:0,8,73	0/0:4,0:4:8.70:0,9,79	1/1:3,0:3:2.22:7,2,0	1/1:9,0:9:3.08:48,3,0	1/1:12,0:12:15.62:91,16,0	1/1:14,0:13:0.65:52,1,0	0/1:12,0:10:5.03:5,0,146	0/0:16,0:15:44.03:0,44,367	0/1:5,0:3:1.36:27,0,1	0/1:8,1:9:33.85:34,0,103	0/0:2,0:1:3.01:0,3,35	0/0:3,0:3:1.18:0,1,35	1/1:12,0:9:7.47:31,7,0	1/1:18,0:14:2.09:67,2,0	0/1:13,0:11:16.72:17,0,21	0/1:7,2:9:12.80:34,0,13	0/1:7,0:7:5.06:5,0,40	0/0:8,0:8:11.56:0,12,127	0/0:2,0:2:6.01:0,6,65	0/0:2,0:2:2.21:0,2,13
chr10	43872603	.	T	TC	5740.34	PASS	AB=0.571;AC=49;AF=0.907;AN=54;BaseQRankSum=0.191;DP=349;FS=8.861;HRun=2;HaplotypeScore=139.7412;InbreedingCoeff=0.4488;MQ=35.60;MQ0=18;MQRankSum=-0.334;QD=26.21;ReadPosRankSum=0.716;VQSLOD=3.7361;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,4:11:26.85:293,27,0	./.	0/0:54,0:4:3.47:0,3,26	0/0:73,0:12:10.41:0,10,166	1/1:2,5:7:13.28:162,13,0	1/1:0,9:9:24.08:358,24,0	1/1:4,13:17:27.09:392,27,0	1/1:2,1:2:2.62:36,3,0	1/1:1,5:6:9.03:134,9,0	1/1:0,4:4:9.03:135,9,0	1/1:3,1:4:3.48:45,3,0	1/1:4,2:8:24.06:283,24,0	1/1:8,2:12:30.06:336,30,0	1/1:10,1:14:39.07:451,39,0	1/1:1,11:10:26.76:368,27,0	1/1:1,15:15:45.15:672,45,0	1/1:4,2:4:5.11:99,5,0	1/1:1,7:9:24.28:311,24,0	1/1:0,2:1:3.01:45,3,0	1/1:1,3:4:9.03:133,9,0	0/1:3,8:9:0.06:78,0,0	1/1:8,5:13:27.26:322,27,0	1/1:7,3:10:20.82:227,21,0	1/1:9,2:12:10.18:194,10,0	1/1:0,7:7:18.03:241,18,0	1/1:4,6:10:18.97:246,19,0	1/1:0,2:2:6.02:90,6,0	1/1:0,2:2:6.02:89,6,0
chr10	43872604	.	C	CT	3440.02	PASS	AB=1.000;AC=50;AF=0.926;AN=54;BaseQRankSum=1.552;DP=345;FS=1.484;HRun=1;HaplotypeScore=149.9221;InbreedingCoeff=0.2292;MQ=36.11;MQ0=16;MQRankSum=-2.187;QD=12.55;ReadPosRankSum=2.893;VQSLOD=2.7998;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,1:12:17.55:159,18,0	./.	0/1:51,0:4:9.23:15,0,9	0/0:71,0:12:14.16:0,14,154	1/1:7,0:7:11.81:106,12,0	1/1:9,0:9:23.99:204,24,0	1/1:16,0:16:5.21:196,5,0	1/1:4,0:3:5.34:34,5,0	1/1:5,0:5:9:81,9,0	1/1:5,0:5:8.76:76,9,0	1/1:2,1:3:5.85:51,6,0	1/1:7,1:8:22.81:170,23,0	1/1:9,1:10:25.67:175,26,0	1/1:15,0:14:33.23:216,33,0	1/1:14,0:12:29.98:280,30,0	1/1:16,1:16:44.98:384,45,0	1/1:4,1:4:4.51:42,5,0	1/1:10,0:10:26.31:193,26,0	1/1:2,0:1:3:25,3,0	1/1:4,0:4:9.01:89,9,0	0/1:12,0:9:0.84:54,0,1	1/1:15,1:13:9.59:165,10,0	1/1:12,1:11:2.21:137,2,0	1/1:10,1:12:5.72:94,6,0	1/1:7,0:7:16.84:169,17,0	1/1:9,1:10:26.71:226,27,0	1/1:2,0:2:5.99:50,6,0	1/1:2,0:2:5.99:49,6,0
chr10	43872623	.	TG	T	8206.11	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-1.581;DP=346;FS=7.010;HRun=1;HaplotypeScore=144.5267;InbreedingCoeff=0.6097;MQ=42.95;MQ0=4;MQRankSum=0.278;QD=28.01;ReadPosRankSum=2.076;VQSLOD=4.3235;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,12:16:29.09:344,29,0	1/1:0,1:1:3.01:42,3,0	0/0:15,3:3:2.64:0,3,58	0/0:32,2:7:5.30:0,5,59	1/1:0,7:12:24.01:288,24,0	1/1:0,12:12:33.11:459,33,0	1/1:0,19:19:48.07:625,48,0	1/1:5,6:11:23.30:284,23,0	1/1:0,5:6:15.05:203,15,0	1/1:0,4:8:17.65:177,18,0	1/1:0,2:4:11.93:127,12,0	1/1:1,11:12:32.97:415,33,0	1/1:1,12:13:39.12:528,39,0	1/1:0,16:17:48.16:667,48,0	1/1:2,8:15:33.83:321,34,0	1/1:1,3:17:46.96:308,47,0	1/1:1,10:9:14.08:172,14,0	1/1:0,6:12:35.80:379,36,0	1/1:0,1:1:3.01:42,3,0	1/1:1,2:7:14.91:153,15,0	1/1:1,11:12:20.09:239,20,0	1/1:2,15:15:45.13:598,45,0	1/1:0,11:11:30.10:403,30,0	1/1:2,13:15:35.06:441,35,0	1/1:0,7:12:23.95:266,24,0	1/1:0,8:15:41.87:460,42,0	1/1:0,3:5:14.86:159,15,0	1/1:0,2:3:9.01:107,9,0
chr10	43873285	.	T	TA	508.34	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-7.189;DP=618;FS=9.549;HRun=9;HaplotypeScore=53.7426;InbreedingCoeff=0.8195;MQ=60.62;MQ0=7;MQRankSum=1.174;QD=20.33;ReadPosRankSum=-3.794;VQSLOD=2.3155;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:98.79:0,99,836	0/0:15,0:15:44.99:0,45,390	0/0:13,0:5:11.91:0,12,94	0/0:17,0:6:2.99:0,3,26	0/0:27,0:27:65.95:0,66,567	0/0:19,0:19:50.96:0,51,439	0/0:27,0:27:62.96:0,63,543	1/1:6,19:25:34.10:603,34,0	0/0:18,0:18:44.98:0,45,391	0/0:18,0:18:47.98:0,48,417	0/0:13,0:13:29.96:0,30,254	0/0:20,0:20:47.94:0,48,414	0/0:28,0:28:80.98:0,81,703	0/0:18,0:18:47.99:0,48,416	0/0:25,0:25:66.87:0,67,575	0/0:23,0:23:59.97:0,60,518	0/0:29,0:29:80.93:0,81,690	0/0:17,0:17:47.97:0,48,411	0/0:26,0:23:53.98:0,54,469	0/0:38,0:38:95.95:0,96,827	0/0:18,0:17:47.97:0,48,413	0/0:25,0:25:53.97:0,54,469	0/0:15,0:15:44.97:0,45,387	0/0:28,0:28:74.97:0,75,651	0/0:16,0:16:22.08:0,22,327	0/0:20,0:21:57.84:0,58,479	0/0:33,0:33:83.94:0,84,722	0/0:9,0:9:17.94:0,18,151
chr10	43874920	.	G	GACAC	1036.95	PASS	AB=0.851;AC=21;AF=0.375;AN=56;BaseQRankSum=-2.395;DP=539;FS=0.502;HRun=0;HaplotypeScore=133.9267;InbreedingCoeff=0.3043;MQ=66.48;MQ0=13;MQRankSum=-2.379;QD=4.20;ReadPosRankSum=-2.472;VQSLOD=1.9236;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:28:38.92:39,0,241	0/0:3,0:3:0.46:0,0,1	0/0:41,0:12:14.92:0,15,220	0/0:64,0:22:9.01:0,9,146	0/0:17,0:17:6.05:0,6,206	0/0:14,0:14:36.11:0,36,586	0/0:21,0:21:54.15:0,54,840	1/1:21,0:19:8.44:71,8,0	0/0:14,0:14:33.08:0,33,508	0/0:20,0:21:0.35:0,0,126	0/0:21,0:21:14.12:0,14,257	1/1:17,0:17:1.35:3,1,0	1/1:2,0:12:9.03:134,9,0	0/1:4,0:12:1.81:46,0,2	0/1:12,3:18:3.81:253,0,4	0/1:8,9:18:12.07:357,0,12	1/1:21,0:21:2.40:44,2,0	0/0:18,0:18:9.26:0,9,256	0/1:11,0:11:7.76:16,0,8	0/0:10,0:10:26.79:0,27,200	0/1:27,0:27:47.44:47,0,136	1/1:2,1:15:5.98:74,6,0	1/1:4,0:4:3:25,3,0	1/1:24,0:24:4.26:56,4,0	0/0:16,0:16:13.31:0,13,209	0/1:19,0:19:38.06:38,0,139	0/0:22,0:22:13.33:0,13,310	0/0:10,0:10:15.48:0,15,184
chr10	43874924	.	C	CAG	708.43	PASS	AB=0.964;AC=18;AF=0.321;AN=56;BaseQRankSum=0.344;DP=541;FS=10.828;HRun=0;HaplotypeScore=117.7242;InbreedingCoeff=-0.0497;MQ=65.42;MQ0=13;MQRankSum=-1.726;QD=2.65;ReadPosRankSum=1.961;VQSLOD=1.7787;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:30:99:121,0,141	0/0:3,0:3:5.93:0,6,41	0/0:41,0:12:25.23:0,25,301	0/0:60,0:19:35.31:0,35,343	0/0:19,0:19:16.71:0,17,129	0/0:16,0:16:42.11:0,42,598	0/0:21,0:21:63.17:0,63,898	0/0:18,0:16:30.40:0,30,254	0/0:13,0:13:39.09:0,39,546	0/1:22,0:22:24.61:25,0,173	0/0:21,0:21:11.67:0,12,242	0/1:17,0:17:14.98:106,0,15	1/1:10,0:10:8.61:72,9,0	0/1:13,0:13:24.05:24,0,26	0/1:17,0:17:60.69:61,0,88	0/1:17,0:17:33.60:34,0,89	0/0:20,0:20:5.77:0,6,151	0/1:17,0:17:0.97:1,0,114	0/1:12,0:12:64.92:65,0,72	0/0:11,0:11:28.62:0,29,131	0/1:29,0:29:87.61:159,0,88	1/1:12,0:12:2.71:36,3,0	1/1:3,0:3:2.88:24,3,0	0/1:6,19:25:38.82:46,0,39	0/0:20,0:20:28.82:0,29,247	0/1:20,0:20:93.65:94,0,187	0/1:23,0:23:0.09:0,0,211	0/0:10,0:10:24.56:0,25,98
chr10	43874930	.	CACAG	C	1177.34	PASS	AB=0.982;AC=23;AF=0.411;AN=56;BaseQRankSum=-3.913;DP=546;FS=4.623;HRun=0;HaplotypeScore=130.3485;InbreedingCoeff=-0.4946;MQ=63.15;MQ0=15;MQRankSum=0.945;QD=2.84;ReadPosRankSum=-9.390;VQSLOD=-0.0767;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:27:62.42:62,0,430	0/1:4,0:4:29.10:39,0,29	0/1:40,0:12:1.86:2,0,143	0/0:58,0:19:17.24:0,17,215	0/1:24,0:23:87.69:88,0,229	0/0:17,0:17:44.51:0,45,918	0/0:21,0:21:39.05:0,39,841	0/1:19,0:17:6.21:205,0,6	0/0:13,0:13:36.05:0,36,796	0/1:21,0:21:54.88:55,0,200	0/1:18,0:18:7.06:7,0,325	0/1:15,0:15:31.41:40,0,31	0/1:9,0:9:1.34:1,0,61	0/1:14,0:14:17.20:87,0,17	0/1:20,0:20:64.34:64,0,180	0/1:15,0:15:16.13:16,0,199	0/1:22,0:21:63.95:114,0,64	0/1:17,0:17:43.41:43,0,277	0/1:5,7:12:27.34:129,0,27	0/0:11,0:11:6.19:0,6,233	0/1:27,0:27:99:151,0,221	0/1:14,0:14:15.18:15,0,37	1/1:6,0:5:8.98:73,9,0	0/1:26,0:26:15.51:16,0,53	0/1:22,0:22:14.65:15,0,321	0/1:19,0:19:55.76:56,0,226	0/1:23,0:23:55.85:56,0,403	0/0:10,0:10:15.29:0,15,246
chr10	43874934	.	GAC	G	1702.60	PASS	AB=0.960;AC=27;AF=0.482;AN=56;BaseQRankSum=-0.537;DP=547;FS=24.755;HRun=0;HaplotypeScore=114.6897;InbreedingCoeff=0.5348;MQ=58.76;MQ0=14;MQRankSum=3.139;QD=5.89;ReadPosRankSum=-3.960;VQSLOD=0.7568;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:28:0.75:59,1,0	0/0:4,0:4:2.97:0,3,20	0/0:38,0:11:8.89:0,9,98	0/0:56,0:16:17.88:0,18,196	1/1:24,1:24:27.53:283,28,0	0/0:16,2:18:6.59:0,7,568	0/1:21,2:23:41.14:41,0,427	0/0:17,0:15:8.35:0,8,54	0/1:11,1:12:2.20:2,0,434	1/1:22,0:22:47.47:351,47,0	1/1:17,1:18:12.88:118,13,0	0/0:13,0:13:5.88:0,6,36	0/1:9,0:9:8:8,0,43	0/0:15,0:15:1.91:0,2,43	0/0:20,0:20:21.42:0,21,184	0/0:15,0:15:24:0,24,226	0/0:22,0:21:14.95:0,15,140	1/1:18,1:19:14.75:106,15,0	1/1:11,0:11:10.40:85,10,0	1/1:12,0:12:7.22:109,7,0	1/1:28,0:28:13.15:140,13,0	0/0:16,0:16:12.11:0,12,80	0/1:6,0:5:0.03:0,0,0	0/0:24,0:24:5.47:0,5,45	1/1:24,0:24:23.62:326,24,0	1/1:18,0:18:17.39:103,17,0	0/1:22,1:23:10.28:96,0,10	1/1:11,0:11:5.27:63,5,0
chr10	43875163	.	G	GA	3759.36	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=3.113;DP=472;FS=3.885;HRun=6;HaplotypeScore=70.6351;InbreedingCoeff=0.9022;MQ=69.75;MQ0=2;MQRankSum=-5.480;QD=23.35;ReadPosRankSum=1.160;VQSLOD=3.1321;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:60.10:0,60,599	1/1:2,5:7:18.06:226,18,0	0/0:19,0:9:17.99:0,18,166	0/1:26,0:13:31.25:31,0,51	0/0:18,0:18:45.10:0,45,459	0/0:24,0:24:48.10:0,48,489	0/0:21,0:21:44.12:0,44,433	0/0:24,0:24:63.12:0,63,628	0/0:17,0:17:42.08:0,42,422	0/0:19,0:19:51.05:0,51,505	0/0:18,0:18:38.45:0,38,396	1/1:1,10:11:24.08:298,24,0	1/1:2,5:8:17.89:203,18,0	1/1:4,13:17:39.11:475,39,0	1/1:7,12:19:48.08:559,48,0	1/1:0,8:8:24.08:298,24,0	1/1:9,16:25:60.12:700,60,0	0/0:15,0:16:40.64:0,41,400	0/0:18,0:18:39.36:0,39,373	0/0:20,0:20:54.10:0,54,542	0/0:17,0:17:42.05:0,42,412	1/1:3,5:8:15.01:171,15,0	1/1:6,10:16:30.10:377,30,0	1/1:6,9:15:36.06:422,36,0	0/0:16,0:16:39.07:0,39,388	0/0:21,0:21:45.07:0,45,452	0/0:12,0:12:33.07:0,33,336	0/0:3,0:3:6.01:0,6,61
chr10	43876471	.	TAA	T	3052.36	PASS	AB=0.848;AC=27;AF=0.482;AN=56;BaseQRankSum=-2.343;DP=568;FS=0.866;HRun=16;HaplotypeScore=101.2654;InbreedingCoeff=0.1805;MQ=77.17;MQ0=1;MQRankSum=1.227;QD=7.67;ReadPosRankSum=4.993;VQSLOD=0.9605;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,11:17:10.06:235,10,0	0/0:10,0:10:2.87:0,3,8	0/1:30,0:22:4.71:5,0,127	0/1:17,0:15:7.37:7,0,25	1/1:7,13:21:25.78:290,26,0	0/0:19,0:22:39.82:0,40,429	0/0:14,0:18:43.12:0,43,405	0/1:23,0:23:20.76:21,0,27	0/0:19,0:22:40.80:0,41,422	1/1:15,16:34:19.68:348,20,0	0/1:7,12:20:61.26:171,0,61	0/0:21,0:20:7.32:0,7,77	0/1:16,0:16:14.24:14,0,66	0/1:12,0:12:8.25:8,0,50	0/1:26,0:23:14.24:14,0,48	0/1:23,0:23:15.37:15,0,21	0/0:25,0:25:6.37:0,6,19	0/1:4,10:15:30.49:122,0,30	1/1:8,12:22:17.82:306,18,0	0/1:10,12:23:25.26:243,0,25	1/1:3,13:15:14.07:254,14,0	0/0:17,0:16:6.37:0,6,139	0/0:16,0:16:2.56:0,3,108	0/0:19,0:19:31.50:0,32,243	0/1:3,6:13:5.58:122,0,6	1/1:7,13:21:44.50:349,45,0	1/1:5,19:30:41.48:424,41,0	1/1:6,10:17:36:288,36,0
chr10	43876484	.	AAAAC	A	1239.59	PASS	AB=0.988;AC=14;AF=0.250;AN=56;BaseQRankSum=2.396;DP=641;FS=10.607;HRun=0;HaplotypeScore=145.3786;InbreedingCoeff=0.5925;MQ=71.03;MQ0=1;MQRankSum=-0.021;QD=6.29;ReadPosRankSum=0.479;VQSLOD=2.0034;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:47.54:0,48,348	1/1:11,0:11:6.97:33,7,0	0/0:32,0:21:19.50:0,19,400	0/0:16,0:10:19.26:0,19,208	0/0:24,0:24:47.06:0,47,426	0/0:22,0:22:36.06:0,36,852	0/0:19,0:19:57.12:0,57,951	1/1:2,17:19:37.92:410,38,0	0/0:24,0:24:66.10:0,66,1055	0/0:34,0:34:88.38:0,88,819	0/0:24,0:24:61.68:0,62,605	0/0:20,0:19:16.57:0,17,70	0/1:18,1:19:76.95:77,0,109	0/1:22,0:22:66.17:66,0,116	1/1:27,3:27:18.54:409,19,0	1/1:25,2:27:26.63:239,27,0	1/1:24,0:24:20.40:69,20,0	0/0:18,0:17:41.80:0,42,396	0/0:30,0:30:72.23:0,72,583	0/0:20,0:20:49.29:0,49,443	0/0:21,0:20:53.73:0,54,455	0/1:21,0:20:51.73:52,0,88	0/1:24,0:24:66.57:67,0,113	0/0:21,0:21:18.55:0,19,218	0/0:20,0:20:44.39:0,44,358	0/0:19,0:19:42.91:0,43,334	0/0:40,0:39:72.17:0,72,631	0/0:20,0:20:47.56:0,48,373
chr10	43876485	.	AAAC	A	2602.52	PASS	AB=0.980;AC=22;AF=0.393;AN=56;BaseQRankSum=4.704;DP=636;FS=11.536;HRun=0;HaplotypeScore=127.0503;InbreedingCoeff=0.8251;MQ=71.25;MQ0=1;MQRankSum=-2.538;QD=9.93;ReadPosRankSum=1.850;VQSLOD=2.8477;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:32.35:0,32,226	1/1:11,0:11:21.32:131,21,0	0/0:31,0:21:8.64:0,9,296	0/0:16,0:10:20.60:0,21,162	0/1:23,1:24:7.15:7,0,229	0/0:23,0:23:43.84:0,44,698	0/0:19,0:19:54.12:0,54,747	1/1:19,0:19:38.91:325,39,0	0/0:24,0:24:60.09:0,60,800	0/0:32,0:32:72.39:0,72,565	0/0:24,0:24:47.44:0,47,409	1/1:21,0:20:12.19:54,12,0	1/1:19,0:19:14.17:153,14,0	1/1:22,0:22:21.36:242,21,0	1/1:22,7:26:63.73:649,64,0	1/1:7,18:25:43.06:485,43,0	1/1:25,0:25:45.63:269,46,0	0/0:18,0:17:38.05:0,38,264	0/0:26,0:26:40.46:0,40,371	0/0:20,0:20:37.37:0,37,271	0/0:23,0:22:52.34:0,52,321	1/1:20,1:20:5.28:149,5,0	1/1:23,1:24:33.26:291,33,0	0/1:22,0:22:41.19:63,0,41	0/0:20,0:20:26.31:0,26,262	0/0:19,0:19:34.86:0,35,189	0/0:39,0:38:18.59:0,19,345	0/0:18,0:19:30.30:0,30,235
chr10	43876486	.	AAC	A	4269.65	PASS	AB=0.994;AC=33;AF=0.589;AN=56;BaseQRankSum=6.580;DP=635;FS=71.878;HRun=0;HaplotypeScore=109.8020;InbreedingCoeff=0.3060;MQ=71.32;MQ0=1;MQRankSum=-3.298;QD=8.56;ReadPosRankSum=6.517;VQSLOD=1.7686;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:20,0:20:32.18:32,0,108	1/1:11,0:11:23.06:222,23,0	0/1:31,0:21:8.75:9,0,234	0/0:15,0:10:11.56:0,12,111	0/1:24,0:24:8.62:9,0,139	0/0:22,0:22:27.88:0,28,545	0/0:19,0:19:53.77:0,54,584	1/1:18,0:18:39.28:295,39,0	0/0:24,0:24:65.57:0,66,651	0/0:32,0:32:33.28:0,33,377	0/0:24,0:24:27.28:0,27,256	1/1:19,3:21:23.46:156,23,0	1/1:17,2:19:45.16:389,45,0	1/1:21,1:22:59.42:495,59,0	1/1:27,1:25:66.73:552,67,0	1/1:25,0:25:45.61:349,46,0	1/1:25,0:25:48.87:444,49,0	0/1:19,0:18:16.42:16,0,158	0/1:25,1:26:6.58:7,0,245	0/1:18,0:18:24.85:25,0,109	0/1:24,0:23:3.48:3,0,172	1/1:18,2:19:36.64:345,37,0	1/1:22,2:24:62.32:504,62,0	1/1:23,0:23:32.52:322,33,0	0/1:21,0:21:2.83:3,0,219	0/1:19,0:19:1.41:1,0,81	0/1:39,1:39:64.54:65,0,237	0/1:20,0:20:25.42:25,0,126
chr10	43876487	.	AC	A	4843.63	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=1.103;DP=635;FS=16.648;HRun=1;HaplotypeScore=98.8718;InbreedingCoeff=0.9081;MQ=72.09;MQ0=1;MQRankSum=-2.300;QD=18.85;ReadPosRankSum=0.829;VQSLOD=3.9088;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:25.59:0,26,234	1/1:0,11:11:23.38:295,23,0	0/0:31,0:22:0.03:0,0,225	0/0:15,0:10:13.67:0,14,130	0/0:24,0:24:38.29:0,38,308	0/1:21,0:21:3.59:4,0,374	0/0:20,0:20:54.49:0,54,461	1/1:17,0:17:39.33:268,39,0	0/0:24,0:24:58.52:0,59,484	0/0:32,0:32:84.59:0,85,596	0/0:24,0:24:59.60:0,60,386	1/1:4,18:21:24:278,24,0	1/1:13,6:19:52.82:448,53,0	1/1:18,4:22:62.89:562,63,0	1/1:27,2:26:69.44:499,69,0	1/1:20,4:24:43.99:285,44,0	1/1:0,24:24:48.16:623,48,0	0/0:19,0:18:29.41:0,29,204	0/0:26,0:26:54.61:0,55,434	0/0:20,0:20:48.67:0,49,289	0/0:24,0:23:52.49:0,52,336	1/1:18,3:20:52.16:471,52,0	1/1:20,4:24:66.13:555,66,0	1/1:15,8:23:58.65:556,59,0	0/0:19,1:20:31.48:0,31,286	0/0:20,0:20:46.28:0,46,286	0/0:40,0:39:55.38:0,55,424	0/0:20,0:20:34.36:0,34,274
chr10	43877331	.	AACACAC	A	1802.40	PASS	AB=0.925;AC=16;AF=0.333;AN=48;BaseQRankSum=-0.109;DP=466;FS=5.862;HRun=0;HaplotypeScore=108.1286;InbreedingCoeff=0.6184;MQ=66.25;MQ0=21;MQRankSum=3.639;QD=14.08;ReadPosRankSum=5.011;VQSLOD=2.0680;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:23:6.49:0,6,123	1/1:1,0:3:3.01:61,3,0	0/0:36,0:21:0.47:0,0,1	0/0:40,0:17:5.99:0,6,82	./.	0/1:12,0:12:24.63:25,0,151	0/0:33,0:32:39.08:0,39,729	0/0:19,0:18:21.06:0,21,390	0/0:12,0:12:3.01:0,3,48	0/0:22,0:21:22.43:0,22,446	0/0:12,0:12:6.02:0,6,120	1/1:14,0:14:9.01:146,9,0	1/1:8,0:8:15.01:261,15,0	1/1:14,0:14:12.04:242,12,0	0/1:14,0:17:0:1,0,0	1/1:6,0:10:6.02:96,6,0	1/1:22,0:22:30.10:567,30,0	0/0:13,0:12:9.03:0,9,180	0/0:15,0:15:21.07:0,21,422	./.	0/0:17,0:16:1.55:0,2,4	./.	./.	1/1:26,0:26:30.08:563,30,0	0/0:10,0:10:3.01:0,3,76	0/0:19,0:18:30.10:0,30,610	0/0:7,0:7:9.50:0,10,166	0/0:3,0:3:9.03:0,9,170
chr10	43877412	.	AGAGAGAGAGAGC	A	2357.69	PASS	AB=1.000;AC=24;AF=0.429;AN=56;BaseQRankSum=-1.629;DP=545;FS=7.719;HRun=0;HaplotypeScore=142.9679;InbreedingCoeff=0.1293;MQ=61.69;MQ0=40;MQRankSum=0.000;QD=7.58;ReadPosRankSum=-2.732;VQSLOD=1.5241;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:26:78.79:79,0,171	1/1:3,4:7:1.05:109,1,0	0/0:25,0:14:36.96:0,37,294	0/0:28,0:18:26.44:0,26,225	0/1:18,0:18:40.80:41,0,62	0/1:16,0:14:47.78:48,0,139	0/0:31,0:27:57.36:0,57,1189	0/1:20,0:19:99:138,0,308	0/0:20,0:19:42.38:0,42,799	0/1:14,0:14:99:157,0,356	1/1:9,0:8:17.95:142,18,0	0/0:28,0:28:61.81:0,62,1163	0/0:15,0:13:21.72:0,22,418	0/0:21,0:18:35.08:0,35,387	0/0:17,0:17:2.83:0,3,21	1/1:4,5:9:3.01:112,3,0	1/1:10,26:32:2.38:319,2,0	0/1:27,0:24:99:174,0,433	0/1:17,0:16:99:201,0,438	1/1:11,0:8:5.12:69,5,0	1/1:33,0:30:46.03:337,46,0	0/0:14,0:13:16.95:0,17,162	0/0:9,0:7:14.94:0,15,216	0/0:26,0:24:44.09:0,44,1102	1/1:11,0:11:18.52:152,19,0	0/1:22,0:20:99:180,0,858	0/1:17,0:16:99:117,0,120	0/1:14,0:12:25.02:162,0,25
chr10	43877414	.	AGAGAGAGAGC	A	2595.81	PASS	AB=0.997;AC=25;AF=0.446;AN=56;BaseQRankSum=-0.518;DP=548;FS=9.318;HRun=0;HaplotypeScore=131.2122;InbreedingCoeff=0.2435;MQ=63.86;MQ0=38;MQRankSum=-0.316;QD=8.29;ReadPosRankSum=-2.187;VQSLOD=1.6630;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:30,1:27:81.99:82,0,99	1/1:4,0:4:3.01:94,3,0	0/0:26,0:15:35.91:0,36,314	0/0:29,0:19:26.60:0,27,224	0/1:18,0:18:35.95:41,0,36	0/1:13,0:12:46.46:46,0,138	0/0:30,0:27:60.34:0,60,976	0/1:21,0:20:99:164,0,188	0/0:20,0:19:39.58:0,40,662	0/1:14,0:14:99:157,0,218	1/1:9,0:8:17.95:142,18,0	0/0:29,0:29:64.81:0,65,1012	0/0:15,0:13:17.87:0,18,332	0/0:21,0:18:35.07:0,35,321	0/0:3,13:16:2.98:0,3,21	1/1:7,1:8:3.01:94,3,0	1/1:34,1:31:14.89:317,15,0	0/1:29,0:26:99:241,0,269	0/1:18,0:17:99:226,0,343	1/1:12,0:9:9.15:96,9,0	1/1:34,0:31:48.59:357,49,0	0/0:15,0:14:19.74:0,20,150	0/0:9,0:7:14.94:0,15,191	0/0:25,0:23:35.87:0,36,897	1/1:13,0:13:26.74:227,27,0	0/1:23,0:21:99:205,0,645	0/1:17,0:16:75.25:124,0,75	1/1:14,0:12:6.14:171,6,0
chr10	43877422	.	AGC	A	3703.07	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=0.401;DP=559;FS=1.926;HRun=0;HaplotypeScore=77.8141;InbreedingCoeff=0.9114;MQ=74.32;MQ0=34;MQRankSum=-4.722;QD=12.68;ReadPosRankSum=0.497;VQSLOD=3.3343;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:28:35.60:300,36,0	1/1:4,0:4:3:26,3,0	0/0:32,0:21:56.79:0,57,451	0/0:35,0:25:24.01:0,24,244	1/1:7,10:17:9:90,9,0	0/0:15,0:14:32.60:0,33,227	0/0:36,0:33:74.45:0,74,574	1/1:20,0:19:29.55:260,30,0	0/0:20,0:19:37.23:0,37,306	1/1:12,3:15:35.97:350,36,0	1/1:12,0:11:26.94:217,27,0	0/0:30,0:30:65.03:0,65,516	0/0:17,0:15:26.64:0,27,204	0/0:22,0:19:34.59:0,35,250	0/0:14,0:14:2.98:0,3,21	1/1:6,0:6:3:27,3,0	1/1:33,0:30:14.90:113,15,0	1/1:27,0:25:53.47:444,53,0	1/1:21,0:20:42.06:346,42,0	1/1:11,0:8:11.99:102,12,0	1/1:30,0:27:53.24:399,53,0	0/0:14,0:13:30.45:0,30,194	0/0:13,0:11:27.23:0,27,192	0/0:19,0:18:40.02:0,40,362	1/1:11,0:11:26.98:227,27,0	1/1:21,0:19:31.77:294,32,0	1/1:18,0:17:27.26:220,27,0	1/1:16,0:14:34.99:289,35,0
chr10	43877950	.	ATT	A	429.35	PASS	AB=0.842;AC=3;AF=0.054;AN=56;BaseQRankSum=4.859;DP=498;FS=7.978;HRun=11;HaplotypeScore=88.4183;InbreedingCoeff=0.5363;MQ=74.47;MQ0=0;MQRankSum=-4.755;QD=11.01;ReadPosRankSum=-1.637;VQSLOD=1.3975;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:20:59.69:0,60,875	0/0:1,0:1:3.01:0,3,46	0/0:17,0:12:17.42:0,17,158	0/0:16,0:9:7.22:0,7,50	0/0:23,0:24:66.20:0,66,967	0/0:21,0:21:60.18:0,60,866	0/0:20,0:20:57.19:0,57,869	1/1:6,15:23:50.99:516,51,0	0/0:14,0:14:36.11:0,36,530	0/0:25,0:26:68.71:0,69,992	0/0:15,0:15:45.14:0,45,673	0/0:14,0:14:39.13:0,39,591	0/0:7,0:7:15.05:0,15,231	0/0:14,0:15:41.63:0,42,608	0/0:14,0:14:42.10:0,42,615	0/0:15,0:15:39.98:0,40,575	0/0:24,0:25:72.24:0,72,1083	0/0:15,0:15:42.14:0,42,642	0/1:13,2:16:18.73:19,0,473	0/0:28,0:28:69.23:0,69,1061	0/0:12,0:14:27.07:0,27,375	0/0:21,0:22:56.68:0,57,826	0/0:16,0:17:47.65:0,48,700	0/0:13,0:13:27.09:0,27,416	0/0:20,0:20:54.17:0,54,789	0/0:20,0:22:56.25:0,56,782	0/0:32,0:33:86.75:0,87,1248	0/0:10,0:10:24.08:0,24,367
chr10	43878114	.	A	AAAAC	2436.97	PASS	AB=0.817;AC=10;AF=0.179;AN=56;BaseQRankSum=3.313;DP=624;FS=6.869;HRun=0;HaplotypeScore=101.3471;InbreedingCoeff=0.7102;MQ=54.30;MQ0=11;MQRankSum=-5.820;QD=18.75;ReadPosRankSum=-3.269;VQSLOD=2.1389;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:57.16:0,57,845	0/1:4,3:6:38.92:65,0,39	0/0:18,0:6:3.01:0,3,47	0/0:34,0:13:12.01:0,12,145	0/0:28,0:28:30.09:0,30,449	0/0:23,0:24:57.17:0,57,852	0/0:19,0:19:18.03:0,18,268	1/1:30,0:30:30.08:522,30,0	0/0:17,0:17:42.13:0,42,634	0/0:24,0:24:45.15:0,45,688	0/0:27,0:26:60.20:0,60,919	0/0:15,0:15:24.08:0,24,375	0/1:13,1:14:43.97:44,0,344	0/0:16,0:16:36.11:0,36,538	1/1:12,0:20:33.11:577,33,0	1/1:15,1:27:27.09:470,27,0	1/1:18,13:32:42.13:927,42,0	0/0:24,0:24:41.89:0,42,579	0/0:13,0:13:14.35:0,14,234	0/0:22,0:22:39.12:0,39,591	0/0:16,0:16:21.07:0,21,320	0/0:21,0:21:54.13:0,54,796	0/0:18,0:17:36.11:0,36,544	0/0:24,0:24:48.09:0,48,699	0/0:25,0:25:36.09:0,36,511	0/0:20,0:19:45.14:0,45,662	0/0:42,0:43:84.28:0,84,1299	0/0:12,0:13:24.05:0,24,332
chr10	43878479	.	GGTGT	G	839.47	PASS	AB=0.780;AC=16;AF=0.333;AN=48;BaseQRankSum=0.528;DP=600;FS=4.755;HRun=0;HaplotypeScore=111.6499;InbreedingCoeff=0.5995;MQ=73.00;MQ0=22;MQRankSum=-0.899;QD=4.82;ReadPosRankSum=1.369;VQSLOD=2.1714;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:28:30.06:0,30,492	0/0:5,0:5:5.98:0,6,72	./.	./.	0/0:12,0:15:4.60:0,5,78	0/1:14,5:18:11.04:40,0,11	0/0:27,0:27:18.04:0,18,358	./.	0/0:13,0:13:14.77:0,15,210	0/0:20,0:20:22.31:0,22,341	0/0:11,0:10:15.05:0,15,289	1/1:28,5:33:11.78:185,12,0	1/1:17,3:21:6:69,6,0	1/1:14,5:19:9.03:139,9,0	0/1:14,6:20:20.98:170,0,21	1/1:12,2:14:2.92:46,3,0	0/0:28,0:26:24.08:0,24,411	0/0:8,0:12:9.03:0,9,147	0/0:16,0:16:6.49:0,6,83	./.	0/0:62,0:59:21.07:0,21,429	1/1:11,0:13:6.48:75,6,0	1/1:7,4:11:2.61:46,3,0	1/1:17,7:23:15.05:232,15,0	0/0:20,0:20:9.03:0,9,163	0/0:20,0:20:15.04:0,15,241	0/0:12,0:19:12.49:0,12,157	0/0:18,0:14:21.07:0,21,356
chr10	43878993	.	GA	G	749.35	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.375;DP=585;FS=0.738;HRun=6;HaplotypeScore=61.4253;InbreedingCoeff=0.9581;MQ=68.38;MQ0=0;MQRankSum=1.086;QD=25.84;ReadPosRankSum=-5.007;VQSLOD=1.1956;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,108,1401	0/0:4,0:4:12.04:0,12,158	0/0:12,0:12:30.09:0,30,384	0/0:10,0:10:23.52:0,24,250	0/0:20,0:20:57.18:0,57,747	0/0:30,0:30:69.18:0,69,888	0/0:14,0:14:27.09:0,27,355	1/1:2,27:29:81.15:844,81,0	0/0:21,0:21:45.15:0,45,590	0/0:23,0:23:60.19:0,60,787	0/0:24,0:24:66.21:0,66,867	0/0:15,0:15:45.15:0,45,592	0/0:24,0:24:69.22:0,69,907	0/0:17,0:17:42.12:0,42,524	0/0:23,0:23:54.18:0,54,710	0/0:20,0:20:57.19:0,57,749	0/0:31,0:31:75.23:0,75,971	0/0:26,0:26:69.22:0,69,908	0/0:16,0:16:45.15:0,45,590	0/0:22,0:22:60.20:0,60,789	0/0:9,0:9:27.09:0,27,355	0/0:12,0:12:36.12:0,36,473	0/0:8,0:8:18.06:0,18,237	0/0:27,0:27:69.18:0,69,883	0/0:21,0:21:60.19:0,60,777	0/0:30,0:30:87.27:0,87,1132	0/0:26,0:26:78.24:0,78,1007	0/0:26,0:26:72.23:0,72,944
chr10	43879243	.	A	ATGTGTGT	2228.26	PASS	AB=0.881;AC=18;AF=0.321;AN=56;BaseQRankSum=7.240;DP=464;FS=34.348;HRun=0;HaplotypeScore=161.8005;InbreedingCoeff=-0.4729;MQ=58.97;MQ0=9;MQRankSum=-5.628;QD=7.26;ReadPosRankSum=-2.947;VQSLOD=0.7885;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:24:39.38:39,0,115	0/1:5,0:7:43.75:44,0,90	0/0:21,0:10:27.08:0,27,352	0/0:18,0:12:33.10:0,33,441	0/1:15,0:15:15.81:134,0,16	0/0:18,0:18:39.11:0,39,630	0/0:14,0:14:39.08:0,39,695	0/1:26,0:26:25.53:26,0,525	0/0:16,0:16:12.93:0,13,804	0/1:16,0:15:77.60:535,0,78	0/1:16,0:15:34.83:44,0,35	0/1:16,0:16:99:115,0,218	0/1:8,6:15:63.85:64,0,110	0/0:15,0:15:8.88:0,9,122	0/0:6,0:16:30.10:0,30,545	0/0:6,0:15:36.11:0,36,575	0/1:13,0:18:99:128,0,352	0/1:6,4:12:54.72:55,0,236	0/1:19,0:15:99:193,0,269	0/1:12,0:12:40.87:41,0,73	0/1:24,0:23:31.15:31,0,332	0/1:15,0:14:34.06:42,0,34	0/0:5,0:5:0.47:0,0,1	0/1:7,1:14:99:209,0,104	0/1:7,10:20:31.82:136,0,32	0/1:19,0:19:99:497,0,231	0/0:19,0:18:7.07:0,7,344	0/1:9,4:16:53.38:53,0,282
chr10	43879263	.	T	TGC	300.46	PASS	AB=0.942;AC=7;AF=0.125;AN=56;BaseQRankSum=7.079;DP=472;FS=5.922;HRun=0;HaplotypeScore=111.1081;InbreedingCoeff=0.0631;MQ=49.27;MQ0=10;MQRankSum=-2.753;QD=2.95;ReadPosRankSum=2.860;VQSLOD=1.9741;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:29:20.06:0,20,162	1/1:3,0:3:4.41:14,4,0	0/0:26,0:10:23.54:0,24,227	0/0:18,0:11:17.96:0,18,177	0/1:14,0:14:6.98:7,0,40	0/0:15,0:15:35.99:0,36,395	0/0:15,0:15:35.96:0,36,411	0/1:19,12:32:94.31:368,0,94	0/0:19,0:19:50.53:0,51,582	0/0:17,0:16:26.85:0,27,283	0/1:18,0:17:9.78:10,0,40	0/0:16,0:16:14.93:0,15,118	0/0:18,0:17:3.24:0,3,67	0/0:14,0:14:8.66:0,9,60	0/0:12,0:12:26.46:0,26,165	0/0:13,0:13:29.54:0,30,220	0/0:18,0:18:10.75:0,11,205	0/0:13,0:13:10.28:0,10,108	0/0:20,0:16:40.42:0,40,309	0/0:16,0:16:17.98:0,18,149	0/0:20,0:19:10.36:0,10,117	0/0:14,0:13:6.46:0,6,51	0/0:6,0:6:3:0,3,25	0/1:15,0:15:8.33:8,0,77	0/1:20,0:20:2.39:2,0,64	0/0:23,0:23:60.48:0,60,454	0/0:16,0:15:14.93:0,15,117	0/0:10,0:10:3.92:0,4,53
chr10	43879265	.	T	TGC	321.46	PASS	AB=0.955;AC=6;AF=0.107;AN=56;BaseQRankSum=6.786;DP=468;FS=1.497;HRun=0;HaplotypeScore=109.9635;InbreedingCoeff=0.0600;MQ=46.65;MQ0=9;MQRankSum=-3.325;QD=3.87;ReadPosRankSum=1.867;VQSLOD=2.1640;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:28:20.69:0,21,166	1/1:3,0:3:4.41:13,4,0	0/0:23,0:9:23.97:0,24,240	0/0:14,0:9:12.64:0,13,155	0/1:15,0:15:13.96:14,0,58	0/0:16,0:16:35.99:0,36,396	0/0:15,0:15:38.95:0,39,436	0/1:25,7:32:99:386,0,126	0/0:18,0:18:45.66:0,46,559	0/0:17,0:16:25.93:0,26,275	0/1:18,0:17:9.78:10,0,40	0/0:15,0:15:8.98:0,9,73	0/0:17,0:16:5.89:0,6,84	0/0:14,0:14:8.93:0,9,68	0/0:13,0:13:29.49:0,29,195	0/0:14,0:14:32.56:0,33,249	0/0:18,0:18:7.36:0,7,182	0/0:11,0:11:6.66:0,7,82	0/0:21,0:17:36.91:0,37,269	0/0:16,0:16:17.98:0,18,149	0/0:20,0:19:13.54:0,14,123	0/0:14,0:13:6.46:0,6,50	0/0:6,0:6:3:0,3,25	0/1:15,0:15:7.80:8,0,76	0/0:20,0:20:0.60:0,1,84	0/0:25,0:25:69.47:0,69,529	0/0:17,0:16:14.96:0,15,120	0/0:10,0:10:3.92:0,4,53
chr10	43879267	.	T	TGC	432.03	PASS	AB=0.964;AC=8;AF=0.143;AN=56;BaseQRankSum=6.995;DP=471;FS=3.195;HRun=0;HaplotypeScore=106.6395;InbreedingCoeff=0.0335;MQ=47.30;MQ0=8;MQRankSum=-1.460;QD=3.57;ReadPosRankSum=1.375;VQSLOD=2.4682;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:28:17.88:0,18,160	1/1:3,0:3:4.41:14,4,0	0/0:23,0:10:23.78:0,24,230	0/0:14,0:8:7.40:0,7,169	0/1:15,0:15:2.97:3,0,61	0/0:14,0:14:36.01:0,36,397	0/0:15,0:15:38.98:0,39,437	0/1:28,7:35:19.75:488,0,20	0/0:18,0:18:51.04:0,51,587	0/0:18,0:17:30.24:0,30,300	0/1:19,0:18:9.78:10,0,40	0/0:13,0:13:5.97:0,6,45	0/0:16,0:15:3.23:0,3,66	0/0:14,0:14:8.89:0,9,62	0/0:14,0:14:32.63:0,33,228	0/0:14,0:14:32.73:0,33,256	0/0:17,0:17:4.57:0,5,150	0/0:13,0:13:12.93:0,13,128	0/0:21,0:17:36.11:0,36,295	0/0:15,0:15:17.98:0,18,148	0/0:20,0:19:11.34:0,11,120	0/0:14,0:13:6.46:0,6,51	0/0:6,0:6:3:0,3,25	0/1:15,0:15:8.02:8,0,77	0/1:19,0:20:21.37:21,0,82	0/0:25,0:25:69.10:0,69,536	0/0:16,0:15:17.91:0,18,138	0/1:14,0:14:2.05:2,0,11
chr10	43880979	.	ACATGGTGGCTCACAAC	A	1002.31	PASS	AB=0.657;AC=3;AF=0.058;AN=52;BaseQRankSum=4.678;DP=662;FS=3.398;HRun=0;HaplotypeScore=178.9782;InbreedingCoeff=0.6012;MQ=41.25;MQ0=66;MQRankSum=-4.115;QD=29.48;ReadPosRankSum=1.516;VQSLOD=2.8103;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:42:39.13:0,39,2708	1/1:5,6:8:12.04:563,12,0	./.	./.	0/0:33,0:28:32.82:0,33,2154	0/0:29,0:24:24.08:0,24,1601	0/0:34,0:23:63.22:0,63,4476	0/0:26,0:23:69.24:0,69,4649	0/0:20,0:16:20.66:0,21,1579	0/0:38,0:35:99:0,99,7097	0/0:16,0:15:21.07:0,21,1655	0/0:19,0:13:27.09:0,27,1933	0/0:19,0:12:17.73:0,18,1257	0/0:24,0:14:18.06:0,18,1393	0/0:34,0:27:54.19:0,54,4005	0/0:23,0:16:30.10:0,30,2137	0/1:11,12:16:99:538,0,436	0/0:23,0:16:39.13:0,39,2838	0/0:19,0:15:45.15:0,45,2801	0/0:21,0:14:33.11:0,33,2565	0/0:28,0:19:33.11:0,33,2396	0/0:40,0:35:66.23:0,66,4611	0/0:20,0:17:35.68:0,36,2268	0/0:28,0:24:36.12:0,36,2239	0/0:21,0:19:30.07:0,30,1921	0/0:26,0:20:57.20:0,57,4331	0/0:28,0:25:57.16:0,57,4399	0/0:9,0:8:18.06:0,18,1422
chr10	43881068	.	TA	T	8938.42	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=7.793;DP=596;FS=0.000;HRun=11;HaplotypeScore=64.3051;InbreedingCoeff=0.9329;MQ=63.57;MQ0=6;MQRankSum=2.121;QD=18.90;ReadPosRankSum=4.788;VQSLOD=5.5502;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,22:27:0.08:319,0,0	1/1:1,11:12:32.96:271,33,0	0/0:16,0:11:18.51:0,19,190	0/0:11,1:8:8.98:0,9,77	1/1:4,32:37:56.92:663,57,0	0/0:22,0:22:41.19:0,41,462	0/0:16,0:15:42.11:0,42,448	0/0:38,0:36:81.20:0,81,863	0/0:19,0:19:54.14:0,54,573	1/1:4,23:26:68.92:567,69,0	1/1:3,22:26:64.94:522,65,0	1/1:1,13:15:33.81:257,34,0	1/1:1,10:11:26.97:222,27,0	1/1:2,18:20:50.94:419,51,0	1/1:5,16:20:43.98:350,44,0	1/1:2,13:15:32.96:271,33,0	1/1:11,19:29:65.66:510,66,0	1/1:3,20:23:53.90:443,54,0	1/1:2,14:16:36.11:337,36,0	1/1:2,30:32:86.90:714,87,0	1/1:4,12:16:17.08:231,17,0	1/1:2,11:14:28.98:228,29,0	1/1:3,12:15:32.96:271,33,0	1/1:2,18:20:50.94:419,51,0	1/1:1,26:28:61.97:499,62,0	1/1:2,23:26:70.93:568,71,0	1/1:2,27:29:71.90:591,72,0	1/1:0,13:13:32.96:271,33,0
chr10	43881670	.	GTGGGT	G	1958.68	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=7.089;DP=334;FS=35.266;HRun=0;HaplotypeScore=68.3526;InbreedingCoeff=0.8231;MQ=79.53;MQ0=1;MQRankSum=-8.962;QD=17.49;ReadPosRankSum=1.215;VQSLOD=1.4249;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:63.16:0,63,1410	1/1:1,2:3:5.98:82,6,0	0/0:25,0:20:47.96:0,48,838	0/0:13,0:6:11.91:0,12,135	0/0:9,0:9:27.09:0,27,578	0/0:9,0:9:27.08:0,27,679	0/0:16,0:16:48.16:0,48,1215	0/0:12,0:12:27.80:0,28,214	0/0:12,0:12:36.12:0,36,965	0/0:8,0:8:21.07:0,21,472	0/0:6,0:6:5.02:0,5,249	1/1:7,13:20:30.10:573,30,0	1/1:1,9:10:12.51:251,13,0	1/1:4,12:16:27.09:528,27,0	0/1:6,0:6:4.93:32,0,5	1/1:3,0:3:2.04:6,2,0	1/1:11,1:13:11.50:124,12,0	0/0:16,0:16:45.07:0,45,1135	0/0:4,0:4:12.04:0,12,244	0/0:12,0:12:27.09:0,27,595	0/0:23,0:22:60.18:0,60,1496	1/1:3,7:10:5.98:83,6,0	1/1:5,3:9:14.32:163,14,0	1/1:7,15:22:15.05:313,15,0	0/0:6,0:6:15.05:0,15,403	0/0:13,0:13:33.11:0,33,716	0/0:14,0:14:36.11:0,36,968	0/0:3,0:3:9.03:0,9,260
chr10	43881671	.	TGGGTTG	T	1096.87	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=8.384;DP=333;FS=45.745;HRun=0;HaplotypeScore=76.1602;InbreedingCoeff=0.6027;MQ=79.63;MQ0=1;MQRankSum=-8.432;QD=10.35;ReadPosRankSum=2.322;VQSLOD=0.2978;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:63.20:0,63,1617	1/1:3,0:3:5.97:49,6,0	0/0:25,0:20:51.13:0,51,962	0/0:13,0:6:11.85:0,12,150	0/0:9,0:9:27.09:0,27,660	0/0:9,0:9:27.09:0,27,816	0/0:17,0:17:51.18:0,51,1494	0/0:13,0:13:1.51:0,2,271	0/0:13,0:13:39.13:0,39,1184	0/0:7,0:7:21.07:0,21,537	0/0:6,0:6:12.01:0,12,333	1/1:16,3:19:30.07:419,30,0	1/1:9,0:9:12.50:119,12,0	1/1:14,2:16:27.06:349,27,0	0/1:6,0:6:12.33:12,0,19	1/1:3,0:3:1.55:4,2,0	0/1:12,0:12:29.98:37,0,30	0/0:16,0:16:45.08:0,45,1307	0/0:4,0:4:12.04:0,12,286	0/0:11,0:11:27.09:0,27,702	0/0:24,0:23:66.20:0,66,1862	0/1:10,0:10:20.91:21,0,22	1/1:9,1:10:2.02:119,2,0	1/1:18,0:18:15.03:148,15,0	0/0:6,0:6:15.05:0,15,474	0/0:13,0:13:33.11:0,33,808	0/0:14,0:14:36.12:0,36,1112	0/0:6,0:6:18.06:0,18,473
chr10	43881672	.	GGGTT	G	1335.97	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=8.445;DP=328;FS=31.814;HRun=0;HaplotypeScore=62.8886;InbreedingCoeff=0.8568;MQ=78.65;MQ0=1;MQRankSum=-8.732;QD=13.36;ReadPosRankSum=1.762;VQSLOD=1.5213;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:69.11:0,69,1288	1/1:3,0:3:5.98:58,6,0	0/0:25,0:19:47.93:0,48,800	0/0:13,0:6:11.78:0,12,124	0/0:10,0:10:29.69:0,30,532	0/0:9,0:9:27.08:0,27,585	0/0:17,0:17:51.16:0,51,1086	0/0:13,0:13:13.90:0,14,84	0/0:13,0:13:39.12:0,39,871	0/0:7,0:7:21.07:0,21,401	0/0:6,0:6:11.95:0,12,239	1/1:17,0:17:30.10:383,30,0	1/1:9,0:9:12.51:153,13,0	1/1:14,0:14:27.09:351,27,0	1/1:6,0:6:4.56:42,5,0	1/1:3,0:3:2.92:17,3,0	1/1:2,9:11:12.04:192,12,0	0/0:16,0:16:45.07:0,45,978	0/0:4,0:4:12.04:0,12,217	0/0:11,0:11:27.09:0,27,530	0/0:23,0:22:66.16:0,66,1341	1/1:10,0:10:0.19:34,0,0	1/1:9,1:10:10.75:115,11,0	1/1:17,0:17:15.05:190,15,0	0/0:5,0:5:15.05:0,15,338	0/0:13,0:13:33.11:0,33,651	0/0:14,0:14:36.11:0,36,837	0/0:6,0:6:18:0,18,293
chr10	43882629	.	TCTCTCC	T	438.11	PASS	AB=0.841;AC=6;AF=0.107;AN=56;BaseQRankSum=0.829;DP=437;FS=8.721;HRun=0;HaplotypeScore=120.4079;InbreedingCoeff=0.1962;MQ=61.06;MQ0=21;MQRankSum=1.959;QD=4.81;ReadPosRankSum=-0.579;VQSLOD=1.7576;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:14:8.11:0,8,105	0/0:7,0:5:8.70:0,9,125	0/1:50,0:16:2.99:3,0,119	0/0:51,0:21:41.49:0,41,609	1/1:6,0:6:0.94:2,1,0	0/0:14,0:14:25.25:0,25,527	0/0:27,0:26:67.65:0,68,1495	0/1:15,13:28:99:511,0,123	0/0:12,0:12:24.02:0,24,558	0/0:9,0:9:24.04:0,24,352	1/1:7,0:7:1.25:3,1,0	0/0:18,0:17:17.85:0,18,176	0/0:6,0:4:11.91:0,12,158	0/0:22,0:22:23.84:0,24,306	0/0:16,0:16:4.35:0,4,52	0/0:13,0:12:17.25:0,17,184	0/0:9,0:9:19.25:0,19,177	0/0:9,0:9:23.42:0,23,295	0/0:15,0:10:27.05:0,27,365	0/0:11,0:10:4.75:0,5,34	0/0:14,0:12:15.05:0,15,252	0/0:14,0:13:10.62:0,11,75	0/0:9,0:7:2.94:0,3,20	0/0:16,0:15:7.63:0,8,43	0/0:9,0:8:5.40:0,5,95	0/0:15,0:10:21.43:0,21,281	0/0:8,0:6:12.01:0,12,187	0/0:7,0:5:6.02:0,6,109
chr10	43882633	.	TC	T	88.75	PASS	AB=0.913;AC=22;AF=0.393;AN=56;BaseQRankSum=-2.922;DP=432;FS=5.985;HRun=11;HaplotypeScore=106.5082;InbreedingCoeff=0.3100;MQ=54.36;MQ0=21;MQRankSum=-0.839;QD=0.60;ReadPosRankSum=1.298;VQSLOD=-0.6318;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:13,3:15:2.54:24,3,0	0/0:5,0:4:3.37:0,3,17	0/0:45,1:13:20.15:0,20,147	0/0:49,0:23:22.72:0,23,241	0/1:6,1:7:0.01:0,0,0	0/0:16,0:16:3.48:0,3,32	0/0:25,1:25:2.16:0,2,186	0/0:29,0:29:23.93:0,24,125	0/1:8,2:10:15.70:16,0,40	0/0:7,0:7:8.51:0,9,42	1/1:5,2:7:0.47:1,0,0	0/0:18,0:17:14.59:0,15,91	0/0:6,0:4:8.81:0,9,54	0/0:21,0:21:19.07:0,19,111	0/0:13,2:15:2.84:0,3,9	1/1:11,1:12:1.98:22,2,0	0/0:10,0:10:10.59:0,11,49	0/1:7,1:8:7.28:19,0,7	1/1:16,1:12:8.77:58,9,0	1/1:8,2:9:2.99:24,3,0	1/1:12,0:10:0.04:10,0,0	0/0:15,0:14:11.09:0,11,65	0/1:9,0:7:0.01:0,0,0	0/0:17,0:16:4.34:0,4,19	1/1:8,0:7:1.30:15,1,0	0/1:13,2:10:12.38:16,0,12	0/1:8,0:6:8.32:8,0,13	1/1:7,0:5:2.97:20,3,0
chr10	43882634	.	C	CT	497.60	PASS	AB=0.961;AC=27;AF=0.482;AN=56;BaseQRankSum=-1.510;DP=394;FS=0.731;HRun=1;HaplotypeScore=99.8062;InbreedingCoeff=0.3586;MQ=54.73;MQ0=19;MQRankSum=0.153;QD=2.96;ReadPosRankSum=-0.771;VQSLOD=-0.5503;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:10:8.41:74,8,0	0/0:6,0:4:2.51:0,3,8	0/0:44,0:11:23.79:0,24,197	0/0:49,0:22:1.33:0,1,239	0/1:5,0:5:0.01:0,0,0	0/0:16,0:16:25.61:0,26,199	0/0:27,0:26:38.42:0,38,545	0/0:29,0:29:50.55:0,51,244	0/0:10,0:10:20.48:0,20,144	0/1:5,0:5:5.76:21,0,6	0/0:5,1:6:0.47:0,0,1	0/1:15,0:14:15.39:15,0,62	0/0:7,0:5:8.13:0,8,45	0/1:18,1:19:1.84:2,0,78	0/0:16,0:16:1.09:0,1,3	1/1:9,1:9:7.15:70,7,0	0/1:11,0:11:12.53:13,0,24	1/1:5,0:5:3.08:40,3,0	1/1:11,1:7:16:103,16,0	1/1:7,1:8:2.67:23,3,0	1/1:9,0:7:8.99:85,9,0	0/0:15,0:14:11.61:0,12,65	1/1:8,0:6:2.95:25,3,0	0/1:16,0:15:9.49:19,0,9	1/1:5,2:6:6.45:58,6,0	1/1:13,0:8:3.34:45,3,0	0/1:5,2:5:0.84:31,0,1	1/1:4,2:4:3.01:38,3,0
chr10	43882641	.	C	CT	328.22	PASS	AB=0.943;AC=15;AF=0.268;AN=56;BaseQRankSum=4.011;DP=368;FS=4.860;HRun=0;HaplotypeScore=98.1491;InbreedingCoeff=0.3792;MQ=55.19;MQ0=12;MQRankSum=-5.016;QD=3.16;ReadPosRankSum=-0.941;VQSLOD=2.8372;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:8:5.91:0,6,38	0/1:3,2:5:4.65:32,0,5	0/0:39,0:12:23.40:0,23,212	0/0:50,0:24:39.61:0,40,415	1/1:4,0:4:1.52:4,2,0	0/0:11,0:11:13.83:0,14,118	0/0:23,0:22:50.90:0,51,491	0/0:23,0:23:42.03:0,42,441	0/0:10,0:10:17.90:0,18,147	0/0:7,0:7:12.34:0,12,57	0/0:8,0:8:0.47:0,0,1	0/1:15,0:15:7.34:82,0,7	0/1:7,0:5:7.97:20,0,8	0/1:17,0:17:23.04:28,0,23	0/0:17,0:17:2.51:0,3,8	0/0:9,0:8:12.47:0,12,69	1/1:6,4:10:0.69:111,1,0	0/0:4,0:4:7.83:0,8,39	0/0:8,0:4:6.03:0,6,27	0/0:9,0:8:1.25:0,1,3	0/0:8,0:6:6:0,6,51	1/1:14,0:14:9.70:84,10,0	1/1:9,0:7:8.82:54,9,0	1/1:16,0:15:9.40:60,9,0	0/1:7,0:6:0.30:1,0,0	0/0:13,0:9:12.81:0,13,67	0/0:9,0:7:1.26:0,1,24	0/0:4,0:3:3.45:0,3,22
chr10	43882671	.	G	GCACACACACACA	8061.88	PASS	AC=40;AF=0.833;AN=48;BaseQRankSum=1.195;DP=391;FS=1.930;HRun=0;HaplotypeScore=153.2094;InbreedingCoeff=0.5750;MQ=47.16;MQ0=14;MQRankSum=-5.403;QD=32.51;ReadPosRankSum=-1.988;VQSLOD=4.1513;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:15:3.01:44,3,0	1/1:8,0:7:3:25,3,0	./.	0/0:45,0:21:9.03:0,9,167	1/1:9,0:10:6.02:313,6,0	0/0:6,0:6:6.02:0,6,202	0/0:24,0:26:51.16:0,51,1498	1/1:19,0:17:20.10:483,20,0	0/0:7,0:8:18.06:0,18,550	1/1:13,0:12:24.08:855,24,0	./.	1/1:15,4:20:18.06:952,18,0	1/1:2,3:7:15.05:755,15,0	1/1:11,3:16:15.05:774,15,0	1/1:10,0:11:2.98:143,3,0	./.	1/1:10,0:10:8.99:242,9,0	1/1:9,0:9:12.04:453,12,0	1/1:10,0:9:12.73:359,13,0	1/1:8,0:8:3.01:109,3,0	./.	1/1:18,1:19:12.04:642,12,0	1/1:9,1:10:3.01:175,3,0	1/1:17,0:18:6.02:348,6,0	1/1:11,0:11:2.67:156,3,0	1/1:15,0:14:15.05:680,15,0	1/1:11,0:10:9.03:401,9,0	1/1:3,0:4:3.01:157,3,0
chr10	43882841	.	C	CTT	2431.64	PASS	AB=0.650;AC=27;AF=0.482;AN=56;BaseQRankSum=-1.317;DP=492;FS=5.896;HRun=14;HaplotypeScore=69.4448;InbreedingCoeff=0.8312;MQ=61.71;MQ0=16;MQRankSum=-0.464;QD=9.25;ReadPosRankSum=-0.944;VQSLOD=1.5735;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,17:32:37.30:346,37,0	1/1:2,2:5:8.98:97,9,0	0/0:11,0:6:6.07:0,6,42	0/0:14,0:10:5.07:0,5,30	1/1:11,14:24:10.95:223,11,0	0/0:23,0:26:37.80:0,38,324	0/0:16,0:15:25.77:0,26,204	0/0:20,0:21:31.15:0,31,223	0/0:15,0:17:20.41:0,20,114	1/1:9,7:16:15.32:149,15,0	1/1:4,7:12:23.71:204,24,0	0/0:18,0:16:5.27:0,5,146	0/0:14,0:13:6.87:0,7,129	0/0:11,0:11:12.87:0,13,88	0/0:6,0:12:13.52:0,14,57	0/0:3,0:7:13.65:0,14,58	1/1:12,19:29:28.06:308,28,0	1/1:11,15:25:15.91:173,16,0	1/1:6,6:12:20.81:184,21,0	1/1:9,12:24:31.61:255,32,0	1/1:7,7:13:8.98:98,9,0	0/0:13,0:16:33.89:0,34,235	0/0:14,0:13:10.93:0,11,138	0/0:27,0:27:36.88:0,37,297	1/1:12,3:15:29.11:258,29,0	0/1:6,7:13:2.74:182,0,3	1/1:6,9:16:6.75:51,7,0	1/1:3,10:13:9.03:118,9,0
chr10	43883584	.	TA	T	573.40	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.443;DP=415;FS=11.939;HRun=10;HaplotypeScore=47.8379;InbreedingCoeff=0.4884;MQ=56.62;MQ0=13;MQRankSum=-0.093;QD=19.11;ReadPosRankSum=-2.438;VQSLOD=2.5800;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:40,2:40:67.08:0,67,941	0/0:6,0:6:15.04:0,15,166	0/0:9,0:3:8.93:0,9,68	0/0:8,0:4:2.88:0,3,15	0/0:31,0:31:84.23:0,84,929	0/0:20,1:21:30.94:0,31,538	0/0:8,0:8:21.06:0,21,232	1/1:4,26:27:77.94:667,78,0	0/0:8,0:8:24.06:0,24,262	0/0:17,1:18:19.07:0,19,439	0/0:21,0:21:51.14:0,51,563	0/0:3,0:3:6.02:0,6,66	0/0:4,0:4:9.02:0,9,99	0/0:4,0:4:12.03:0,12,133	0/0:8,0:8:1.23:0,1,122	0/0:2,0:2:5.99:0,6,54	0/0:29,0:28:53.30:0,53,710	0/0:18,0:16:29.15:0,29,460	0/0:22,1:24:33.93:0,34,579	0/0:18,0:18:36.08:0,36,389	0/0:5,0:5:15.04:0,15,166	0/0:3,0:3:6.02:0,6,66	0/0:13,0:13:36.10:0,36,398	0/0:3,0:3:8.71:0,9,64	0/0:16,0:16:48.13:0,48,531	0/0:22,0:22:63.15:0,63,682	0/0:18,0:18:45.12:0,45,498	0/0:23,0:23:63.05:0,63,688
chr10	43883607	.	TA	T	1848.33	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=8.487;DP=451;FS=9.696;HRun=9;HaplotypeScore=50.1217;InbreedingCoeff=0.9719;MQ=67.88;MQ0=1;MQRankSum=0.734;QD=19.05;ReadPosRankSum=-0.264;VQSLOD=3.0265;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:81.23:0,81,924	1/1:0,5:5:14.91:126,15,0	0/0:12,0:9:20.62:0,21,191	0/0:6,0:7:10.29:0,10,54	0/0:34,0:34:99:0,99,1102	0/0:17,0:17:45.13:0,45,519	0/0:8,0:8:21.06:0,21,242	0/0:35,0:35:78.20:0,78,874	0/0:11,0:11:33.09:0,33,371	0/0:21,0:21:63.18:0,63,721	0/0:19,0:19:48.13:0,48,544	1/1:0,7:7:21.01:192,21,0	1/1:0,7:7:15.01:137,15,0	1/1:0,8:8:24.01:220,24,0	1/1:1,11:12:27.01:247,27,0	1/1:0,4:4:9:82,9,0	1/1:5,23:28:56.96:512,57,0	0/0:20,0:20:45.07:0,45,493	0/0:22,0:22:57.15:0,57,638	0/0:19,0:19:45.09:0,45,505	0/0:7,0:7:21.06:0,21,242	1/1:0,6:6:15.01:137,15,0	1/1:3,10:13:30.01:274,30,0	1/1:1,6:7:15.01:137,15,0	0/0:17,0:17:45.13:0,45,519	0/0:27,0:27:75.21:0,75,856	0/0:21,0:21:63.18:0,63,722	0/0:22,0:22:66.11:0,66,715
chr10	43884135	.	G	GA	618.29	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=4.669;DP=511;FS=3.749;HRun=8;HaplotypeScore=87.2376;InbreedingCoeff=0.9346;MQ=61.27;MQ0=7;MQRankSum=-4.832;QD=18.74;ReadPosRankSum=-1.415;VQSLOD=3.1769;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:72.01:0,72,652	0/0:6,0:6:11.98:0,12,103	0/0:35,0:15:16.23:0,16,184	0/0:35,0:16:29.46:0,29,219	0/0:24,0:24:57.03:0,57,522	0/0:19,0:19:48.02:0,48,439	0/0:17,0:17:45.02:0,45,412	0/0:25,0:24:53.85:0,54,462	0/0:21,0:21:49.84:0,50,444	0/0:16,0:16:45.02:0,45,408	0/0:14,0:14:36.01:0,36,329	0/0:11,0:11:21.01:0,21,192	0/0:5,0:5:8.98:0,9,82	0/0:11,0:11:29.91:0,30,257	1/1:6,11:15:33.07:359,33,0	1/1:3,13:13:36:380,36,0	0/0:18,0:18:33.01:0,33,301	0/0:24,0:23:66.03:0,66,603	0/0:24,0:24:62.99:0,63,566	0/0:15,0:15:33:0,33,296	0/0:8,0:8:17.98:0,18,159	0/0:12,0:12:27.02:0,27,248	0/0:15,0:14:30.90:0,31,275	0/0:21,0:21:16.18:0,16,273	0/0:13,0:13:39.02:0,39,357	0/0:28,0:28:45.49:0,45,580	0/0:28,0:28:84.05:0,84,768	0/0:7,0:7:21.01:0,21,192
chr10	43884152	.	G	GA	2067.92	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=12.037;DP=532;FS=11.424;HRun=9;HaplotypeScore=97.1225;InbreedingCoeff=0.9136;MQ=59.47;MQ0=6;MQRankSum=-5.784;QD=10.29;ReadPosRankSum=-1.723;VQSLOD=1.1720;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:74.97:0,75,650	1/1:1,5:6:15.02:151,15,0	0/1:46,0:18:3.16:3,0,141	0/0:43,0:17:17.97:0,18,155	0/0:21,0:21:56.98:0,57,494	0/0:18,0:18:44.98:0,45,391	0/0:17,0:17:41.99:0,42,365	1/1:10,14:23:49.81:511,50,0	0/0:23,0:23:59.95:0,60,520	0/0:18,0:18:35.97:0,36,312	0/0:15,0:15:32.99:0,33,286	1/1:2,7:9:18.03:184,18,0	1/1:4,3:7:14.86:133,15,0	1/1:4,9:13:30.07:316,30,0	1/1:8,0:14:11.52:49,12,0	1/1:8,0:14:7.87:35,8,0	1/1:5,12:17:8.90:128,9,0	0/0:20,0:20:56.99:0,57,493	0/0:23,0:23:62.96:0,63,539	0/0:13,0:13:35.91:0,36,303	0/0:9,0:9:23.99:0,24,207	1/1:5,7:12:30.05:309,30,0	1/1:8,5:12:20.11:213,20,0	1/1:13,6:19:16.04:255,16,0	0/0:16,0:16:44.31:0,44,384	0/0:30,0:30:80.98:0,81,703	0/0:30,0:30:77.97:0,78,676	0/0:7,0:7:15:0,15,130
chr10	43884159	.	AAAG	A	1934.53	PASS	AB=0.857;AC=19;AF=0.339;AN=56;BaseQRankSum=12.458;DP=528;FS=12.079;HRun=0;HaplotypeScore=118.9895;InbreedingCoeff=0.8930;MQ=60.14;MQ0=6;MQRankSum=-6.262;QD=14.02;ReadPosRankSum=-0.380;VQSLOD=2.6691;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:81.26:0,81,1531	0/1:5,1:6:32.05:44,0,32	0/0:40,0:17:24.82:0,25,445	0/0:44,0:20:31.27:0,31,458	0/0:22,0:22:63.19:0,63,1165	0/0:16,0:16:45.14:0,45,945	0/0:17,0:17:51.14:0,51,956	1/1:22,1:22:57.99:600,58,0	0/0:24,0:24:66.19:0,66,1291	0/0:17,0:17:49.73:0,50,840	0/0:13,0:13:33.11:0,33,666	1/1:8,1:9:15.17:178,15,0	1/1:8,0:8:10.07:104,10,0	1/1:12,0:12:25.37:253,25,0	1/1:18,0:16:25.24:87,25,0	1/1:18,0:15:20.65:110,21,0	0/0:18,0:18:8.27:0,8,120	0/0:22,0:22:66.20:0,66,1149	0/0:24,0:24:72.13:0,72,1235	0/0:13,0:13:39.12:0,39,754	0/0:13,0:13:39.06:0,39,599	1/1:11,1:12:31.90:267,32,0	1/1:10,3:12:25.30:241,25,0	1/1:14,5:19:13.59:263,14,0	0/0:17,0:18:53.61:0,54,923	0/0:30,0:30:86.77:0,87,1634	0/0:27,0:27:81.21:0,81,1527	0/0:5,0:5:15.05:0,15,315
chr10	43884160	.	AAG	A	1593.68	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=14.143;DP=528;FS=16.398;HRun=0;HaplotypeScore=112.1224;InbreedingCoeff=0.9081;MQ=60.25;MQ0=5;MQRankSum=-8.542;QD=11.47;ReadPosRankSum=0.074;VQSLOD=2.3871;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:81.25:0,81,1283	0/1:6,0:6:7.88:8,0,74	0/0:38,2:17:22.91:0,23,353	0/0:42,0:19:29.69:0,30,380	0/0:21,0:21:63.20:0,63,993	0/0:16,0:16:45.14:0,45,762	0/0:18,0:18:54.14:0,54,815	1/1:25,0:24:40.60:229,41,0	0/0:23,0:23:66.18:0,66,1069	0/0:17,0:17:49.74:0,50,710	0/0:12,0:12:33.11:0,33,555	1/1:9,0:9:17.07:72,17,0	1/1:8,0:8:12.75:54,13,0	1/1:11,0:11:24.94:89,25,0	1/1:13,5:16:37.25:447,37,0	1/1:15,4:16:39.35:511,39,0	0/0:17,0:17:21.66:0,22,171	0/0:22,0:22:66.15:0,66,969	0/0:25,0:25:75.14:0,75,1080	0/0:13,0:13:39.12:0,39,630	0/0:14,0:14:42.07:0,42,548	1/1:12,0:12:7.09:78,7,0	1/1:11,1:12:26.10:146,26,0	1/1:17,2:19:32.31:172,32,0	0/0:19,0:19:52.69:0,53,763	0/0:30,0:30:89.78:0,90,1395	0/0:27,0:27:81.22:0,81,1269	0/0:5,0:5:15.05:0,15,254
chr10	43884167	.	AGAG	A	4313.32	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=8.452;DP=506;FS=10.221;HRun=0;HaplotypeScore=111.9839;InbreedingCoeff=0.7630;MQ=60.67;MQ0=3;MQRankSum=-5.597;QD=25.37;ReadPosRankSum=-5.870;VQSLOD=2.7558;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:18.27:0,18,682	0/1:6,0:6:25.79:27,0,26	0/0:39,0:18:41.37:0,41,752	0/0:37,1:17:34.56:0,35,553	0/1:21,0:21:13.12:13,0,488	0/0:18,0:18:54.18:0,54,1106	0/0:18,0:18:54.16:0,54,1140	1/1:5,21:27:81.19:1258,81,0	0/0:20,0:20:60.21:0,60,1296	0/0:17,0:17:24.64:0,25,362	0/0:12,0:12:13.97:0,14,276	1/1:4,0:9:26.98:251,27,0	1/1:3,0:8:21:206,21,0	1/1:2,0:11:33:323,33,0	1/1:8,10:16:43.12:612,43,0	1/1:6,12:16:47.15:643,47,0	0/1:14,0:14:42.44:42,0,46	0/0:21,0:21:42.54:0,43,559	0/0:23,0:23:54.66:0,55,585	0/0:12,0:12:31.61:0,32,358	0/0:14,0:14:10.87:0,11,352	1/1:4,0:11:33.04:356,33,0	1/1:5,0:11:29.44:275,29,0	1/1:9,1:16:29.05:308,29,0	0/0:17,0:17:41.85:0,42,476	0/0:31,0:31:56.20:0,56,818	0/0:22,0:22:44.02:0,44,711	0/0:7,0:7:16.73:0,17,159
chr10	43884169	.	AG	A	2221.41	PASS	AB=1.000;AC=20;AF=0.357;AN=56;BaseQRankSum=12.279;DP=512;FS=18.502;HRun=1;HaplotypeScore=101.5568;InbreedingCoeff=0.8547;MQ=60.99;MQ0=3;MQRankSum=-7.871;QD=14.52;ReadPosRankSum=-2.492;VQSLOD=1.6194;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:70.65:0,71,918	0/1:6,0:6:1.32:1,0,20	0/0:38,0:18:32.85:0,33,437	0/0:39,0:18:35.15:0,35,333	0/0:21,1:22:4.43:0,4,655	0/0:19,0:19:54.12:0,54,686	0/0:18,0:18:51.16:0,51,694	1/1:26,1:27:68.29:418,68,0	0/0:20,0:20:60.16:0,60,786	0/0:17,0:17:42.37:0,42,543	0/0:12,0:12:32.91:0,33,393	1/1:3,5:8:22.97:140,23,0	1/1:4,5:9:22.05:154,22,0	1/1:3,8:11:32.57:230,33,0	1/1:18,1:17:26.34:371,26,0	1/1:19,0:17:48.12:425,48,0	0/1:14,0:14:27.06:27,0,29	0/0:21,0:21:63.03:0,63,768	0/0:24,0:24:72.10:0,72,858	0/0:13,0:13:34.75:0,35,462	0/0:14,0:14:38.86:0,39,518	1/1:5,7:12:34.07:245,34,0	1/1:6,5:11:28.89:182,29,0	1/1:11,6:17:27.54:239,28,0	0/0:17,0:17:51.03:0,51,631	0/0:30,0:30:87.18:0,87,1110	0/0:22,0:22:63.09:0,63,839	0/0:7,0:7:20.99:0,21,224
chr10	43884170	.	G	GA	1385.62	PASS	AB=1.000;AC=20;AF=0.357;AN=56;BaseQRankSum=10.005;DP=509;FS=9.195;HRun=9;HaplotypeScore=104.1253;InbreedingCoeff=0.7984;MQ=62.24;MQ0=3;MQRankSum=-5.380;QD=8.25;ReadPosRankSum=-2.534;VQSLOD=1.0715;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,1:25:26.79:0,27,462	0/0:6,0:6:11.32:0,11,60	0/0:38,0:19:33.54:0,34,277	0/0:36,0:18:12.41:0,12,149	0/1:21,0:21:4.71:5,0,358	0/0:19,0:19:44.98:0,45,391	0/0:17,0:17:47.99:0,48,417	1/1:26,0:26:54.24:484,54,0	0/0:20,0:20:50.99:0,51,443	0/0:16,1:17:8.79:0,9,304	0/0:12,0:12:26.88:0,27,222	1/1:8,0:8:7.97:30,8,0	1/1:9,0:9:13.43:49,13,0	1/1:11,0:11:20.99:86,21,0	1/1:19,0:17:15.77:321,16,0	1/1:18,1:17:37.49:362,37,0	0/1:14,0:14:7.48:7,0,55	0/0:21,0:21:50.99:0,51,442	0/0:24,0:24:56.97:0,57,491	0/0:12,1:13:2.81:0,3,253	0/0:14,0:14:35.99:0,36,312	1/1:12,0:12:21.86:99,22,0	1/1:11,0:11:12.74:48,13,0	1/1:18,0:18:9.70:99,10,0	0/0:17,0:17:44.99:0,45,389	0/0:30,0:30:80.87:0,81,697	0/0:22,0:22:56.98:0,57,495	0/0:7,0:7:14.99:0,15,129
chr10	43884723	.	CT	C	402.74	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.337;DP=639;FS=51.708;HRun=2;HaplotypeScore=78.6574;InbreedingCoeff=0.6766;MQ=49.85;MQ0=44;MQRankSum=-2.423;QD=22.37;ReadPosRankSum=-5.731;VQSLOD=-0.5854;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,5:36:72.85:0,73,835	0/0:7,0:7:18.05:0,18,225	0/0:55,0:14:39.06:0,39,489	0/0:75,1:10:24.06:0,24,295	0/0:32,0:32:48.53:0,49,767	0/0:23,1:24:48.97:0,49,546	0/0:10,0:10:20.65:0,21,237	1/1:1,17:17:44.13:497,44,0	0/0:9,0:7:18.06:0,18,255	0/0:15,0:14:42.14:0,42,569	0/0:19,0:19:52.05:0,52,702	0/0:13,1:14:4.27:0,4,298	0/0:10,0:10:21.71:0,22,278	0/0:19,1:20:23.79:0,24,509	0/0:15,0:15:39.13:0,39,533	0/0:8,0:8:14.85:0,15,175	0/0:25,0:24:46.55:0,47,722	0/0:28,0:27:25.19:0,25,686	0/0:20,0:20:59.98:0,60,739	0/0:12,0:12:32.65:0,33,380	0/0:29,0:23:14.06:0,14,619	0/0:20,4:23:9.23:0,9,518	0/0:15,1:16:3.36:0,3,460	0/0:23,3:26:48.85:0,49,602	0/0:21,0:20:51.05:0,51,619	0/0:18,0:16:40.88:0,41,551	0/0:21,0:18:51.16:0,51,688	0/0:23,5:26:11.76:0,12,732
chr10	43884724	.	TTC	T	91.11	PASS	AB=1.000;AC=12;AF=0.240;AN=50;BaseQRankSum=-0.173;DP=660;FS=2.608;HRun=0;HaplotypeScore=92.2150;InbreedingCoeff=0.2210;MQ=48.63;MQ0=44;MQRankSum=1.696;QD=0.55;ReadPosRankSum=0.446;VQSLOD=1.3078;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:36:9.87:0,10,75	./.	./.	./.	0/0:26,0:32:2.97:0,3,20	1/1:17,7:24:13.28:133,13,0	1/1:9,1:10:0.25:28,0,0	0/0:24,0:23:10.81:0,11,51	0/0:10,0:8:9.01:0,9,100	0/0:15,0:14:5.38:0,5,50	0/0:20,0:20:15.02:0,15,173	0/0:14,0:14:2.48:0,2,9	0/1:11,0:12:6.68:7,0,20	0/0:18,0:19:6.07:0,6,44	0/0:16,0:16:8.91:0,9,82	1/1:8,0:8:2.76:21,3,0	0/0:25,0:24:12.35:0,12,62	0/1:29,0:28:1.72:2,0,223	0/1:22,0:22:4.60:5,0,106	0/1:12,0:16:1.21:8,0,1	0/0:29,0:23:8.04:0,8,65	0/0:25,0:25:5.29:0,5,45	0/0:16,0:16:9.02:0,9,104	0/1:26,0:27:12.96:13,0,64	0/0:22,0:21:8.90:0,9,74	0/1:19,0:17:1.07:1,0,119	0/0:21,0:18:17.43:0,17,120	0/0:30,0:28:12.32:0,12,86
chr10	43884770	.	CTT	C	1602.31	PASS	AB=0.975;AC=23;AF=0.411;AN=56;BaseQRankSum=1.119;DP=479;FS=5.152;HRun=3;HaplotypeScore=76.4548;InbreedingCoeff=0.4781;MQ=49.19;MQ0=26;MQRankSum=1.163;QD=7.25;ReadPosRankSum=-1.470;VQSLOD=-0.3371;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:32:14.33:0,14,444	1/1:9,0:8:14.77:136,15,0	0/0:11,0:3:8.83:0,9,64	0/0:16,0:4:8.79:0,9,79	0/0:18,0:17:32.49:0,32,285	0/1:20,0:20:5.11:5,0,211	0/0:11,0:11:23.12:0,23,227	1/1:15,0:14:2.13:174,2,0	0/0:12,2:12:26.89:0,27,221	0/0:14,0:14:30.04:0,30,289	0/0:18,0:18:47.47:0,47,434	1/1:7,0:7:14.25:105,14,0	1/1:9,0:9:11.50:118,12,0	1/1:15,0:15:30.46:250,30,0	0/1:10,1:10:13.66:61,0,14	1/1:2,8:9:3.01:46,3,0	0/1:25,0:22:91.75:211,0,92	0/0:27,0:25:5.33:0,5,351	0/0:19,1:18:3.30:0,3,335	0/0:16,0:16:9.35:0,9,261	0/0:15,0:10:17.23:0,17,173	1/1:11,0:10:7.84:110,8,0	1/1:19,0:19:2.06:236,2,0	1/1:26,1:27:11.20:302,11,0	0/0:18,0:18:45.46:0,45,443	0/1:21,1:20:8.70:9,0,355	0/1:21,0:19:27.41:27,0,204	0/0:26,0:25:43.03:0,43,390
chr10	43885128	.	TGAGC	T	1515.36	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.901;DP=616;FS=0.000;HRun=0;HaplotypeScore=100.0704;InbreedingCoeff=0.9830;MQ=68.76;MQ0=1;MQRankSum=-7.157;QD=30.31;ReadPosRankSum=-4.379;VQSLOD=2.2970;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:54.57:0,55,1303	0/0:12,0:12:36.11:0,36,860	0/0:28,0:21:47.96:0,48,1211	0/0:36,0:32:66.52:0,67,1664	0/0:37,0:36:99:0,108,2774	0/0:23,0:23:66.23:0,66,1778	0/0:13,0:13:33.11:0,33,747	1/1:28,22:41:93.79:1610,94,0	0/0:22,0:22:66.23:0,66,1692	0/0:22,0:22:66.23:0,66,1762	0/0:23,0:23:69.22:0,69,1674	0/0:12,0:12:36.12:0,36,915	0/0:16,0:16:45.13:0,45,998	0/0:10,0:10:27.08:0,27,695	0/0:18,0:18:51.17:0,51,1369	0/0:21,0:21:63.20:0,63,1636	0/0:26,0:26:75.26:0,75,1947	0/0:16,0:16:48.16:0,48,1310	0/0:20,0:20:54.18:0,54,1376	0/0:18,0:18:54.19:0,54,1439	0/0:21,0:21:63.22:0,63,1652	0/0:21,0:21:60.19:0,60,1421	0/0:21,0:21:60.19:0,60,1531	0/0:23,0:22:69.24:0,69,1839	0/0:17,0:17:45.15:0,45,1197	0/0:29,0:29:87.29:0,87,2256	0/0:32,0:31:96.31:0,96,2199	0/0:6,0:6:15.05:0,15,345
chr10	43885795	.	TA	T	2430.87	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=12.120;DP=465;FS=1.384;HRun=9;HaplotypeScore=44.9254;InbreedingCoeff=0.9428;MQ=63.96;MQ0=1;MQRankSum=-0.002;QD=19.93;ReadPosRankSum=0.814;VQSLOD=3.8900;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:75.21:0,75,855	1/1:1,6:7:18.01:165,18,0	0/0:12,0:6:5.41:0,5,65	0/0:6,0:7:8.03:0,8,62	0/0:30,0:30:90.24:0,90,1018	0/0:21,0:21:63.19:0,63,727	0/0:4,0:4:9.03:0,9,104	0/0:31,0:31:75.20:0,75,841	0/0:11,0:11:33.10:0,33,381	0/0:15,1:16:37.13:0,37,464	0/0:20,0:20:51.15:0,51,589	1/1:2,17:19:39.02:357,39,0	1/1:5,11:16:33.01:302,33,0	1/1:1,7:8:21:192,21,0	1/1:2,11:13:27.01:247,27,0	1/1:0,11:11:33.02:302,33,0	1/1:0,23:23:60.03:549,60,0	0/0:27,0:26:60.18:0,60,692	0/0:13,0:13:33.10:0,33,381	0/0:21,0:21:57.17:0,57,658	0/0:8,0:8:21.02:0,21,219	1/1:1,3:4:5.95:47,6,0	1/1:2,13:15:38.98:349,39,0	1/1:0,6:6:15.01:137,15,0	0/0:30,0:30:86.28:0,86,968	0/0:31,0:31:81.24:0,81,935	0/0:18,0:17:47.34:0,47,515	0/0:16,0:16:48.14:0,48,554
chr10	43886641	.	A	AT	5046.28	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-13.638;DP=511;FS=3.911;HRun=8;HaplotypeScore=51.2689;InbreedingCoeff=0.9923;MQ=86.57;MQ0=0;MQRankSum=-1.867;QD=27.58;ReadPosRankSum=1.643;VQSLOD=5.5704;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,99,899	1/1:2,7:9:21.06:242,21,0	0/0:19,0:20:35.04:0,35,331	0/0:20,0:20:37.12:0,37,319	0/0:30,0:30:77.07:0,77,692	0/0:18,0:18:50.99:0,51,457	0/0:18,0:18:45.02:0,45,412	1/1:6,22:28:41.70:703,42,0	0/0:9,0:9:27:0,27,243	0/0:14,0:14:39:0,39,349	0/0:16,0:16:17.09:0,17,274	1/1:0,8:8:24.07:277,24,0	1/1:1,6:7:12.04:138,12,0	1/1:0,14:14:39.12:449,39,0	1/1:3,18:21:48.14:554,48,0	1/1:1,9:10:21.06:242,21,0	1/1:4,28:32:78.23:900,78,0	0/0:12,0:12:29.99:0,30,268	0/0:21,0:21:51.01:0,51,467	0/0:17,0:17:45:0,45,407	0/0:22,0:22:54.02:0,54,494	1/1:1,11:12:36.04:397,36,0	1/1:3,22:25:57.01:658,57,0	1/1:0,17:17:42.12:485,42,0	0/0:17,0:17:47.98:0,48,429	0/0:29,0:29:78.02:0,78,710	0/0:16,0:16:42.02:0,42,384	0/0:11,0:11:33.02:0,33,302
chr10	43888094	.	AT	A	6402.42	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-5.552;DP=660;FS=2.575;HRun=10;HaplotypeScore=82.9633;InbreedingCoeff=0.9905;MQ=81.41;MQ0=0;MQRankSum=-1.409;QD=20.39;ReadPosRankSum=4.407;VQSLOD=5.5880;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,38:40:95.98:833,96,0	0/0:13,0:13:33.08:0,33,354	0/0:17,1:19:18.81:0,19,379	0/0:23,0:21:44.68:0,45,427	1/1:6,20:26:26.79:462,27,0	0/0:22,0:22:60.15:0,60,656	0/0:17,0:18:25:0,25,484	0/0:5,0:22:54.57:0,55,320	0/0:26,0:26:69.15:0,69,745	1/1:3,31:34:92.94:801,93,0	1/1:2,11:13:29.98:260,30,0	0/0:21,1:22:34.08:0,34,589	0/0:38,0:38:99:0,108,1175	0/0:13,0:13:36.09:0,36,391	0/0:19,0:19:25.70:0,26,475	0/0:11,1:12:10.04:0,10,332	0/0:21,0:21:57.15:0,57,630	1/1:1,22:24:65.02:553,65,0	1/1:8,16:24:38.03:404,38,0	1/1:2,22:25:61.64:501,62,0	1/1:3,24:31:75.09:617,75,0	0/0:18,0:20:53.94:0,54,548	0/0:25,0:30:65.64:0,66,685	0/0:27,0:27:81.22:0,81,896	1/1:2,19:21:17.81:383,18,0	1/1:7,25:32:68.96:599,69,0	1/1:3,20:23:56.98:495,57,0	1/1:3,18:21:56.99:494,57,0
chr10	43888961	.	CCA	C	1415.01	PASS	AB=0.948;AC=10;AF=0.179;AN=56;BaseQRankSum=4.472;DP=469;FS=14.574;HRun=0;HaplotypeScore=80.4842;InbreedingCoeff=0.4868;MQ=67.07;MQ0=5;MQRankSum=0.803;QD=12.52;ReadPosRankSum=-3.104;VQSLOD=1.7207;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:39.09:0,39,580	0/1:3,0:3:27.64:28,0,88	0/0:26,0:18:32.27:0,32,369	0/0:15,0:7:8.36:0,8,73	0/0:27,0:26:40.21:0,40,872	0/1:9,1:10:71.01:71,0,216	0/0:8,0:8:18.05:0,18,268	1/1:9,28:37:83.93:909,84,0	0/0:14,0:14:36.09:0,36,532	0/0:28,2:30:23.53:0,24,877	0/1:13,1:14:0.54:1,0,499	0/0:14,0:13:26.98:0,27,237	0/0:10,0:11:30.03:0,30,302	0/0:10,0:11:30.01:0,30,292	1/1:7,10:14:24.08:293,24,0	1/1:2,11:13:21.07:257,21,0	0/0:22,0:22:28.17:0,28,630	0/0:17,0:17:42.03:0,42,621	0/0:16,1:17:2.44:0,2,502	0/0:20,1:22:11.47:0,11,690	0/0:17,0:16:36.12:0,36,582	0/0:7,0:8:15.02:0,15,176	0/0:14,0:16:39.01:0,39,369	0/0:9,0:9:7.22:0,7,117	0/0:16,1:17:14.48:0,14,714	0/0:21,0:21:63.12:0,63,922	0/1:18,1:19:12.30:12,0,609	0/0:8,0:8:18.03:0,18,243
chr10	43888988	.	TAC	T	1123.46	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=7.755;DP=484;FS=17.021;HRun=0;HaplotypeScore=97.2610;InbreedingCoeff=0.8743;MQ=58.90;MQ0=8;MQRankSum=1.122;QD=16.05;ReadPosRankSum=2.760;VQSLOD=2.1883;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:23.89:0,24,314	0/0:3,0:3:6.02:0,6,102	0/0:27,1:11:17.69:0,18,171	0/0:21,0:11:8.21:0,8,252	0/0:20,0:20:45:0,45,522	0/0:13,0:13:30.10:0,30,498	0/0:14,0:14:42.12:0,42,665	0/0:49,0:48:99:0,120,1874	0/0:10,0:10:30.05:0,30,453	0/0:23,0:23:54.13:0,54,826	0/0:16,0:16:39.12:0,39,622	1/1:8,4:10:21.07:267,21,0	1/1:8,5:13:23.99:270,24,0	1/1:8,3:11:2.25:244,2,0	0/0:15,0:12:30.09:0,30,482	0/0:15,0:14:33.10:0,33,534	0/0:21,0:21:44.74:0,45,707	0/0:17,0:17:39.10:0,39,615	0/0:15,0:15:41.87:0,42,641	0/0:21,0:21:42.09:0,42,630	0/0:17,0:16:27.02:0,27,401	1/1:5,2:7:9.01:102,9,0	1/1:12,3:15:27.07:333,27,0	1/1:5,7:11:6.02:79,6,0	0/0:25,0:25:54.17:0,54,890	0/0:24,0:24:59.97:0,60,915	0/0:19,0:19:33.01:0,33,526	0/0:8,0:8:9.01:0,9,125
chr10	43889020	.	T	TACACAC	2019.58	PASS	AB=1.000;AC=25;AF=0.481;AN=52;BaseQRankSum=-0.719;DP=539;FS=0.699;HRun=0;HaplotypeScore=143.1066;InbreedingCoeff=0.5166;MQ=49.94;MQ0=14;MQRankSum=-0.040;QD=6.94;ReadPosRankSum=-2.434;VQSLOD=2.3156;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:18:2.93:38,3,0	0/0:2,0:2:3.01:0,3,49	1/1:26,0:7:0.47:1,0,0	./.	1/1:6,10:18:2.29:38,2,0	0/0:18,0:19:34.44:0,34,590	0/1:18,0:17:27.66:28,0,244	0/0:39,0:38:0.40:0,0,84	0/0:10,0:9:12.01:0,12,201	1/1:17,0:18:24.06:394,24,0	1/1:16,0:17:13.91:211,14,0	0/0:12,0:13:2.92:0,3,42	0/1:8,0:14:0:0,0,0	0/0:8,0:14:3.30:0,3,42	0/0:8,0:18:21.07:0,21,312	0/0:8,0:11:21.53:0,22,270	0/0:28,0:31:21.12:0,21,677	0/0:10,0:21:6.20:0,6,12	1/1:16,4:21:18.24:294,18,0	1/1:7,10:18:3.01:39,3,0	1/1:12,0:19:3.01:39,3,0	0/1:3,0:9:0.24:1,0,0	0/0:9,0:16:2.87:0,3,48	0/0:7,0:8:3:0,3,48	1/1:11,14:31:14.55:192,15,0	1/1:13,15:34:56.49:871,56,0	1/1:11,11:25:2.18:35,2,0	./.
chr10	43890127	.	ATGTGTGTGTGTGTGTG	A	2043.82	PASS	AB=0.817;AC=20;AF=0.385;AN=52;BaseQRankSum=4.872;DP=506;FS=6.090;HRun=0;HaplotypeScore=192.9268;InbreedingCoeff=0.5062;MQ=64.69;MQ0=12;MQRankSum=-2.973;QD=9.97;ReadPosRankSum=-0.253;VQSLOD=2.0596;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:31,11:41:17.93:125,0,18	0/0:8,0:8:8.06:0,8,546	0/0:33,0:21:9.03:0,9,211	0/0:26,0:18:3.01:0,3,92	./.	0/0:13,0:12:15.05:0,15,648	0/0:13,0:18:12.04:0,12,556	1/1:20,5:23:9.01:164,9,0	0/0:14,0:15:30.10:0,30,1270	1/1:11,0:12:3:72,3,0	1/1:10,3:13:3.01:131,3,0	0/0:13,0:14:9.03:0,9,442	0/0:6,0:6:9.03:0,9,398	0/0:21,0:21:21.07:0,21,1263	0/0:20,0:20:15.05:0,15,904	0/0:17,0:15:6.02:0,6,314	0/0:14,0:20:12.04:0,12,794	1/1:11,5:16:0.96:199,1,0	1/1:21,0:19:3:112,3,0	1/1:10,2:12:3.01:112,3,0	./.	0/0:16,0:15:15.05:0,15,675	0/0:4,0:3:3.01:0,3,196	0/0:19,0:30:39.13:0,39,2416	1/1:6,3:9:3.01:131,3,0	1/1:10,8:18:24.06:629,24,0	0/1:26,5:31:22.32:491,0,22	1/1:3,0:3:5.69:42,6,0
chr10	43890313	.	AT	A	8923.76	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=10.156;DP=422;FS=0.474;HRun=1;HaplotypeScore=93.8327;InbreedingCoeff=0.9742;MQ=72.46;MQ0=3;MQRankSum=-5.537;QD=26.09;ReadPosRankSum=3.023;VQSLOD=4.8222;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,28:30:81.06:762,81,0	1/1:1,5:6:14.98:136,15,0	0/0:12,0:12:30.10:0,30,472	0/0:17,0:17:48.08:0,48,720	1/1:2,15:17:44.98:409,45,0	0/0:18,0:18:45.15:0,45,714	0/0:16,0:16:48.16:0,48,765	1/1:0,21:19:57.04:555,57,0	0/0:17,0:17:51.16:0,51,792	1/1:1,11:12:36.02:363,36,0	1/1:1,12:13:27.02:261,27,0	1/1:2,5:6:15.01:140,15,0	1/1:1,5:6:12.02:126,12,0	1/1:1,13:14:41.69:384,42,0	1/1:1,11:12:36.05:355,36,0	1/1:4,8:12:33.02:317,33,0	1/1:3,23:25:69.07:658,69,0	1/1:1,15:16:42.07:421,42,0	1/1:2,6:7:21.05:231,21,0	1/1:1,14:15:39.03:371,39,0	1/1:4,27:30:77.31:754,77,0	1/1:0,7:7:21.02:197,21,0	1/1:0,5:5:12.01:116,12,0	1/1:2,25:27:81.08:791,81,0	1/1:0,12:12:36.02:341,36,0	1/1:1,16:17:48.06:481,48,0	1/1:2,20:21:63.03:583,63,0	1/1:0,6:6:18.02:174,18,0
chr10	43890315	.	CT	C	7802.52	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=9.790;DP=420;FS=0.472;HRun=2;HaplotypeScore=97.9471;InbreedingCoeff=0.9609;MQ=73.47;MQ0=3;MQRankSum=-7.040;QD=23.02;ReadPosRankSum=3.175;VQSLOD=4.7905;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,28:29:80.84:682,81,0	1/1:0,5:5:11.90:84,12,0	0/0:12,0:12:33.09:0,33,460	0/0:18,0:18:47.61:0,48,659	1/1:2,16:18:41.79:327,42,0	0/0:18,0:18:45.12:0,45,650	0/0:16,0:16:45.15:0,45,675	1/1:2,19:19:56.84:487,57,0	0/0:17,0:17:51.15:0,51,743	1/1:1,11:12:35.91:327,36,0	1/1:0,12:12:23.95:200,24,0	1/1:1,5:6:11.99:104,12,0	1/1:0,5:5:8.99:77,9,0	1/1:0,13:13:38.38:305,38,0	1/1:1,11:12:35.98:318,36,0	1/1:4,8:12:35.91:296,36,0	1/1:2,23:24:65.91:567,66,0	1/1:2,15:17:44.97:401,45,0	1/1:2,6:7:21.02:199,21,0	1/1:2,14:16:41.88:349,42,0	1/1:1,28:29:73.94:658,74,0	1/1:0,7:7:20.96:176,21,0	1/1:0,5:5:11.98:104,12,0	1/1:2,25:27:80.95:717,81,0	1/1:0,12:12:35.92:305,36,0	1/1:1,16:17:47.79:414,48,0	1/1:2,20:22:65.86:550,66,0	1/1:0,6:6:17.98:156,18,0
chr10	43890409	.	CT	C	2398.81	PASS	AB=0.778;AC=34;AF=0.607;AN=56;BaseQRankSum=-4.040;DP=424;FS=10.181;HRun=12;HaplotypeScore=70.3968;InbreedingCoeff=0.6883;MQ=78.77;MQ0=12;MQRankSum=-0.305;QD=8.98;ReadPosRankSum=2.720;VQSLOD=1.9638;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,18:22:40.90:323,41,0	0/0:4,0:5:10.39:0,10,91	0/0:45,1:21:17.32:0,17,173	0/1:38,0:18:8.03:19,0,8	1/1:6,9:16:1.37:144,1,0	0/0:13,0:15:29.78:0,30,256	0/0:7,0:7:18.01:0,18,173	1/1:18,0:18:17.86:75,18,0	0/0:11,1:12:26.98:0,27,243	1/1:6,8:15:25.92:189,26,0	1/1:3,11:15:31.86:233,32,0	1/1:8,0:7:3.02:8,3,0	0/0:9,0:9:6.22:0,6,43	1/1:9,0:9:0.33:19,0,0	0/0:14,0:14:25.33:0,25,134	0/0:16,0:16:24.81:0,25,142	0/0:24,0:23:51.94:0,52,501	1/1:5,11:16:31.91:238,32,0	1/1:5,10:15:29.85:230,30,0	1/1:4,10:16:30.84:211,31,0	1/1:4,8:11:11.92:92,12,0	0/0:8,0:8:0.34:0,0,13	1/1:7,0:7:9.95:31,10,0	1/1:9,0:9:9.01:24,9,0	0/1:2,8:10:12.49:98,0,12	1/1:1,18:21:57.85:427,58,0	1/1:4,10:13:23.89:186,24,0	1/1:0,3:4:8.01:52,8,0
chr10	43890420	.	TTAA	T	1031.33	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=3.666;DP=441;FS=1.028;HRun=0;HaplotypeScore=89.3966;InbreedingCoeff=0.6369;MQ=78.22;MQ0=12;MQRankSum=0.571;QD=5.52;ReadPosRankSum=-0.540;VQSLOD=2.2326;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:48.92:0,49,478	0/0:5,0:5:0.94:0,1,42	0/1:65,0:27:7.79:8,0,521	0/0:44,0:19:9.58:0,10,92	0/0:15,0:15:36.06:0,36,426	0/0:14,0:14:36.07:0,36,658	0/0:7,0:7:21.04:0,21,402	1/1:0,15:15:39.07:526,39,0	0/0:13,0:13:36.10:0,36,643	0/0:12,0:12:12.39:0,12,292	0/0:14,0:14:23.76:0,24,380	1/1:6,0:6:8.22:36,8,0	1/1:10,0:10:7.84:117,8,0	1/1:11,0:10:0.72:115,1,0	0/1:15,0:15:6.63:49,0,7	1/1:14,0:14:22.30:105,22,0	0/1:27,0:27:16.38:16,0,116	0/0:15,0:15:39.04:0,39,392	0/0:16,0:16:26.66:0,27,494	0/0:13,0:13:18.09:0,18,337	0/0:8,0:8:15.01:0,15,158	1/1:7,0:7:3.38:104,3,0	1/1:8,0:8:15.29:61,15,0	1/1:9,0:9:19.08:81,19,0	0/0:12,0:11:29.97:0,30,366	0/0:26,0:26:57.43:0,57,776	0/0:15,0:15:41.99:0,42,463	0/0:4,0:4:9.01:0,9,86
chr10	43890421	.	TA	T	1075.77	PASS	AB=0.982;AC=22;AF=0.393;AN=56;BaseQRankSum=4.733;DP=439;FS=34.628;HRun=7;HaplotypeScore=76.0247;InbreedingCoeff=0.7308;MQ=76.50;MQ0=12;MQRankSum=-4.201;QD=8.03;ReadPosRankSum=2.297;VQSLOD=-0.2477;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:5.37:0,5,53	1/1:4,1:5:2.71:33,3,0	0/0:64,0:28:11.40:0,11,244	0/0:42,0:17:10.33:0,10,64	0/0:15,0:15:8.74:0,9,121	0/0:14,0:14:27.05:0,27,299	0/0:6,0:6:18.03:0,18,191	1/1:15,0:15:30.44:131,30,0	0/0:13,0:13:27.01:0,27,286	0/0:12,0:12:8.12:0,8,70	0/0:14,0:14:10.92:0,11,79	1/1:0,6:6:9.02:91,9,0	1/1:3,4:10:24.65:171,25,0	1/1:5,4:9:22.53:177,23,0	1/1:2,0:15:15.23:51,15,0	1/1:0,0:14:18.63:58,19,0	0/1:26,1:27:28.12:36,0,28	0/0:15,0:15:15.54:0,16,83	0/0:16,0:16:28.67:0,29,162	0/0:13,0:13:14.99:0,15,96	0/1:8,0:8:11.42:11,0,19	1/1:0,5:7:17.75:131,18,0	1/1:0,8:8:18.04:181,18,0	1/1:0,9:9:21.04:212,21,0	0/0:12,0:11:10.21:0,10,117	0/0:26,0:26:20.45:0,20,189	0/0:15,0:15:14.34:0,14,122	0/0:4,0:4:4.98:0,5,23
chr10	43892345	.	TTTCCTTCCTTCCTTCCTTCC	T	9756.90	PASS	AB=0.900;AC=21;AF=0.375;AN=56;BaseQRankSum=11.748;DP=487;FS=24.277;HRun=0;HaplotypeScore=254.2999;InbreedingCoeff=0.8663;MQ=53.39;MQ0=9;MQRankSum=-9.237;QD=54.20;ReadPosRankSum=0.813;VQSLOD=2.7436;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:59.07:0,59,3594	1/1:3,6:9:9.03:407,9,0	0/0:21,0:10:0.47:0,0,1	0/0:16,0:10:9.03:0,9,137	0/0:20,0:20:45.15:0,45,2536	0/0:24,0:23:60.20:0,60,2378	0/0:15,0:15:36.12:0,36,1644	1/1:8,12:19:33.07:588,33,0	0/0:21,0:20:42.13:0,42,2445	0/0:19,0:19:36.12:0,36,2073	0/0:11,0:11:27.09:0,27,1359	1/1:18,0:18:42.14:1382,42,0	1/1:15,0:15:33.09:840,33,0	1/1:12,0:12:36.12:1265,36,0	1/1:7,0:12:5.96:639,6,0	0/1:16,0:18:41.85:547,0,42	1/1:12,0:12:27.09:645,27,0	0/0:10,0:10:25.90:0,26,849	0/0:23,0:21:39.13:0,39,1899	0/0:17,0:17:33.10:0,33,1656	0/0:18,0:18:45.15:0,45,2209	1/1:24,0:24:45.14:1232,45,0	1/1:22,0:22:42.11:1278,42,0	1/1:18,0:18:33.11:932,33,0	0/0:15,0:21:21.05:0,21,513	0/0:12,0:12:30.10:0,30,1489	0/0:18,0:18:51.13:0,51,2804	0/0:8,0:8:21.07:0,21,878
chr10	43892359	.	TC	T	822.03	PASS	AB=0.917;AC=12;AF=0.214;AN=56;BaseQRankSum=10.846;DP=447;FS=11.999;HRun=2;HaplotypeScore=108.7812;InbreedingCoeff=0.1702;MQ=49.63;MQ0=14;MQRankSum=-7.218;QD=5.48;ReadPosRankSum=-1.450;VQSLOD=-0.7348;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,1:32:90.11:0,90,1255	0/0:6,0:6:8.28:0,8,46	1/1:11,0:2:5.05:40,5,0	0/0:9,0:4:9.03:0,9,130	0/0:22,0:22:63.17:0,63,873	0/0:25,0:24:72.20:0,72,1020	0/0:17,0:17:48.13:0,48,678	0/0:17,0:15:4.12:0,4,141	0/0:18,0:17:51.15:0,51,727	0/0:18,0:18:48.16:0,48,688	0/0:11,0:11:33.10:0,33,473	0/1:13,4:16:1.06:132,0,1	1/1:12,3:15:30.28:206,30,0	0/1:10,3:13:11.61:118,0,12	0/1:14,0:14:65.99:66,0,190	0/1:15,0:15:59.40:59,0,274	0/1:11,1:12:46.45:46,0,181	0/0:11,0:11:26.14:0,26,402	0/0:17,0:15:45.15:0,45,657	0/0:14,0:14:42.14:0,42,618	0/0:19,0:19:54.14:0,54,766	0/1:16,2:18:43.38:80,0,43	0/1:14,2:16:12.52:144,0,13	0/1:19,0:18:30.79:86,0,31	0/0:14,0:13:21.46:0,21,277	0/0:16,0:16:48.16:0,48,705	0/0:21,0:21:63.20:0,63,913	0/0:8,0:7:21.07:0,21,310
chr10	43892361	.	CT	C	1435.51	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=11.515;DP=451;FS=32.684;HRun=2;HaplotypeScore=113.3545;InbreedingCoeff=0.6571;MQ=49.03;MQ0=15;MQRankSum=-7.458;QD=9.90;ReadPosRankSum=1.046;VQSLOD=-0.0836;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:33:90.21:0,90,1246	0/0:6,0:6:2.52:0,3,11	0/0:11,0:2:0.47:0,0,1	0/0:9,0:4:9.03:0,9,116	0/0:22,0:21:57.19:0,57,839	0/0:23,0:22:69.22:0,69,998	0/0:17,0:17:48.13:0,48,682	0/1:14,0:12:17.36:36,0,17	0/0:18,0:17:51.16:0,51,746	0/0:17,0:17:45.15:0,45,651	0/0:10,0:10:30.10:0,30,442	1/1:16,3:18:36.52:282,37,0	1/1:14,3:17:30.10:328,30,0	1/1:8,7:15:34.23:223,34,0	0/0:15,0:15:0.09:0,0,145	0/1:14,0:15:3.18:3,0,236	0/1:12,0:12:35.90:36,0,119	0/0:11,0:11:26.17:0,26,438	0/0:17,0:15:45.14:0,45,645	0/0:14,0:14:42.13:0,42,602	0/0:20,0:20:54.17:0,54,776	1/1:14,3:17:31.91:269,32,0	1/1:12,4:16:14.73:263,15,0	1/1:17,3:19:16.04:179,16,0	0/0:15,0:14:20.75:0,21,284	0/0:17,0:17:51.16:0,51,730	0/0:21,0:21:63.18:0,63,900	0/0:8,0:7:21.07:0,21,310
chr10	43892362	.	T	TCCC	2897.39	PASS	AB=0.905;AC=16;AF=0.296;AN=54;BaseQRankSum=8.188;DP=450;FS=12.653;HRun=2;HaplotypeScore=131.1828;InbreedingCoeff=0.7109;MQ=49.09;MQ0=15;MQRankSum=-6.373;QD=21.30;ReadPosRankSum=1.780;VQSLOD=-0.2192;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:33:89.97:0,90,1513	1/1:6,0:6:6.84:32,7,0	./.	0/0:8,0:4:9.03:0,9,136	0/0:21,0:20:57.18:0,57,1017	0/0:24,0:23:69.22:0,69,1184	0/0:18,0:18:48.64:0,49,866	1/1:14,0:12:22.09:212,22,0	0/0:19,0:18:51.15:0,51,872	0/0:16,0:16:45.15:0,45,825	0/0:10,0:10:30.10:0,30,548	1/1:15,4:18:10.92:506,11,0	0/1:13,4:17:8.98:529,0,9	1/1:14,1:15:5.79:370,6,0	0/0:15,0:15:15.43:0,15,165	0/0:15,0:15:0.32:0,0,176	0/1:12,0:12:67.24:97,0,67	0/0:11,0:11:32.94:0,33,523	0/0:17,0:15:45.15:0,45,799	0/0:14,0:14:42.13:0,42,737	0/0:20,0:20:57.18:0,57,997	1/1:11,5:17:23.11:564,23,0	1/1:14,2:16:12.09:430,12,0	1/1:17,3:19:5.72:339,6,0	0/0:15,0:14:26.95:0,27,346	0/0:17,0:17:51.16:0,51,876	0/0:21,0:21:63.16:0,63,1059	0/0:8,0:7:21.07:0,21,390
chr10	43892369	.	C	CAT	1782.75	PASS	AB=0.796;AC=7;AF=0.130;AN=54;BaseQRankSum=7.971;DP=448;FS=1.144;HRun=0;HaplotypeScore=134.8808;InbreedingCoeff=-0.1625;MQ=47.91;MQ0=16;MQRankSum=-9.553;QD=14.26;ReadPosRankSum=-2.025;VQSLOD=3.3151;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,1:31:59.65:0,60,1277	0/0:6,0:6:9.02:0,9,101	./.	0/0:4,0:1:3.01:0,3,48	0/0:21,0:20:57.19:0,57,915	0/0:20,0:19:60.18:0,60,915	0/0:19,0:19:54.18:0,54,876	0/0:18,0:16:15.29:0,15,230	0/0:18,0:17:51.17:0,51,812	0/0:20,0:20:51.04:0,51,796	0/0:11,0:11:30.09:0,30,466	0/1:12,7:18:99:349,0,215	0/1:13,7:20:99:469,0,157	0/1:9,6:15:99:337,0,178	0/0:16,0:16:47.30:0,47,444	0/0:14,0:14:41.58:0,42,409	0/1:11,2:13:45.85:46,0,227	0/0:12,0:12:23.81:0,24,410	0/0:18,0:15:32.22:0,32,671	0/0:12,0:12:36.12:0,36,587	0/0:21,0:21:57.16:0,57,880	0/1:13,2:15:99:118,0,232	0/1:14,2:16:99:169,0,198	0/1:18,9:26:88.41:424,0,88	0/0:13,0:12:20.07:0,20,273	0/0:15,0:15:44.98:0,45,699	0/0:21,0:21:63.22:0,63,1026	0/0:5,0:4:12.04:0,12,196
chr10	43892372	.	CCTTCCTT	C	1699.91	PASS	AB=0.908;AC=10;AF=0.185;AN=54;BaseQRankSum=8.787;DP=453;FS=12.380;HRun=0;HaplotypeScore=176.6919;InbreedingCoeff=-0.0221;MQ=47.79;MQ0=16;MQRankSum=-7.326;QD=11.33;ReadPosRankSum=0.984;VQSLOD=1.6635;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:31:87.25:0,87,2294	1/1:6,0:6:9.01:103,9,0	./.	0/0:3,0:1:2.88:0,3,15	0/0:20,0:19:51.14:0,51,1427	0/0:19,0:18:54.18:0,54,1455	0/0:20,0:20:57.19:0,57,1230	0/0:21,0:17:19.05:0,19,229	0/0:18,0:17:51.02:0,51,1499	0/0:21,0:21:57.19:0,57,1399	0/0:10,0:10:30.10:0,30,893	0/1:16,3:18:99:264,0,312	0/1:19,0:19:99:109,0,359	0/1:12,5:17:99:280,0,267	0/1:16,0:16:99:239,0,195	0/1:12,0:12:99:129,0,221	0/0:13,0:13:15.08:0,15,277	0/0:12,0:12:22.03:0,22,600	0/0:20,0:17:48.13:0,48,1103	0/0:12,0:12:36.12:0,36,1170	0/0:21,0:21:60.19:0,60,1419	0/1:14,3:16:92.48:266,0,92	0/1:14,4:18:99:289,0,328	0/1:25,0:25:99:165,0,336	0/0:13,0:12:14.65:0,15,150	0/0:16,0:16:45.15:0,45,1214	0/0:22,0:22:66.21:0,66,2003	0/0:5,0:4:12.04:0,12,461
chr10	43892395	.	CCCTT	C	4713.98	PASS	AB=0.889;AC=21;AF=0.389;AN=54;BaseQRankSum=12.791;DP=461;FS=9.070;HRun=0;HaplotypeScore=136.2040;InbreedingCoeff=0.9018;MQ=49.09;MQ0=18;MQRankSum=-8.169;QD=22.45;ReadPosRankSum=-1.856;VQSLOD=3.8873;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:31:72.51:0,73,1027	1/1:6,0:6:9.05:55,9,0	./.	0/0:4,0:3:2.19:0,2,65	0/0:14,0:13:30.07:0,30,476	0/0:15,0:14:36.04:0,36,532	0/0:23,0:23:55.71:0,56,801	1/1:26,0:22:32.92:302,33,0	0/0:13,0:12:21.06:0,21,403	0/0:22,0:22:55.40:0,55,888	0/0:8,0:8:21.06:0,21,394	1/1:22,0:20:51:586,51,0	1/1:14,1:15:45.09:525,45,0	1/1:23,0:23:53.94:574,54,0	1/1:19,1:19:51.07:634,51,0	1/1:14,1:15:41.97:478,42,0	1/1:15,0:15:25.96:305,26,0	0/0:8,0:8:18.80:0,19,295	0/0:18,0:14:32.79:0,33,446	0/0:15,0:15:33.05:0,33,568	0/0:19,0:19:42.02:0,42,605	1/1:6,11:16:14.96:173,15,0	0/1:14,2:16:1.29:374,0,1	1/1:34,1:34:64.10:708,64,0	0/0:9,0:8:13.85:0,14,190	0/0:16,0:16:39.11:0,39,650	0/0:26,0:26:72.16:0,72,1176	0/0:5,0:3:9.03:0,9,223
chr10	43892725	.	TACCACC	T	146.28	PASS	AC=10;AF=0.714;AN=14;BaseQRankSum=1.453;DP=198;FS=0.000;HRun=0;HaplotypeScore=46.3786;MQ=78.95;MQ0=10;MQRankSum=-2.450;QD=3.40;ReadPosRankSum=0.470;VQSLOD=0.9468;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	./.	0/0:5,0:4:3.01:0,3,94	./.	./.	0/0:8,0:9:12.04:0,12,317	./.	./.	./.	./.	./.	./.	1/1:2,0:3:3.01:42,3,0	./.	1/1:11,0:10:3:28,3,0	1/1:11,1:12:3.01:59,3,0	1/1:4,2:6:3.01:59,3,0	./.	./.	./.	1/1:10,0:11:3.01:42,3,0	./.	./.	./.	./.
chr10	43893411	.	GA	G	2341.84	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=10.838;DP=512;FS=1.433;HRun=8;HaplotypeScore=47.9472;InbreedingCoeff=0.9941;MQ=73.18;MQ0=0;MQRankSum=-0.212;QD=20.54;ReadPosRankSum=2.569;VQSLOD=3.4122;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:63.19:0,63,757	1/1:0,9:9:24.04:232,24,0	0/0:12,0:11:24.02:0,24,250	0/0:10,0:10:20.84:0,21,209	0/0:30,0:30:90.26:0,90,1074	0/0:27,0:27:72.20:0,72,857	0/0:5,0:5:15.05:0,15,181	0/0:27,0:27:72.21:0,72,860	0/0:20,0:20:54.14:0,54,628	0/0:29,0:29:84.26:0,84,1013	0/0:29,0:29:78.20:0,78,917	1/1:3,18:21:39.06:377,39,0	1/1:1,13:14:36.06:348,36,0	1/1:0,18:18:48.08:464,48,0	0/0:10,0:10:30.08:0,30,353	0/0:11,0:11:30.09:0,30,362	1/1:1,14:15:27.04:261,27,0	0/0:25,0:25:63.19:0,63,758	0/0:11,0:11:33.10:0,33,398	0/0:29,0:29:81.19:0,81,930	0/0:8,0:8:24.07:0,24,290	1/1:1,9:10:24.04:232,24,0	1/1:3,12:15:33.05:319,33,0	1/1:1,11:11:33.05:319,33,0	0/0:27,0:27:78.18:0,78,914	0/0:17,0:17:45.14:0,45,544	0/0:37,0:37:96.29:0,96,1156	0/0:10,0:10:21.06:0,21,254
chr10	43894750	.	CT	C	511.42	PASS	AB=0.889;AC=7;AF=0.125;AN=56;BaseQRankSum=4.439;DP=521;FS=0.535;HRun=11;HaplotypeScore=65.7120;InbreedingCoeff=0.7791;MQ=67.99;MQ0=1;MQRankSum=1.974;QD=7.10;ReadPosRankSum=-1.888;VQSLOD=1.6303;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:60.13:0,60,631	0/0:12,0:12:15.82:0,16,155	0/0:12,0:8:14.59:0,15,116	0/0:12,0:11:17.77:0,18,145	0/0:23,1:24:35.49:0,35,570	0/0:20,0:20:57.11:0,57,591	0/0:17,0:17:36.09:0,36,384	1/1:34,0:34:44.18:164,44,0	0/0:15,0:15:20.46:0,20,415	0/0:24,0:24:54.05:0,54,542	0/0:27,0:26:63:0,63,639	0/0:16,0:16:13.90:0,14,125	0/0:21,0:21:47.61:0,48,229	0/1:7,1:8:26.16:26,0,49	1/1:5,16:21:20.80:321,21,0	1/1:2,7:9:17.98:148,18,0	0/0:13,1:14:12.31:0,12,140	0/0:12,0:12:33.07:0,33,344	0/0:21,0:21:48.07:0,48,493	0/0:32,0:32:63.10:0,63,644	0/0:11,0:10:30.06:0,30,312	0/0:13,0:13:27.06:0,27,143	0/0:18,0:18:7.02:0,7,165	0/0:19,0:19:42.59:0,43,219	0/0:19,2:22:13.62:0,14,516	0/0:26,0:26:69.16:0,69,728	0/0:15,0:15:30.08:0,30,320	0/0:22,0:22:66.09:0,66,680
chr10	43894760	.	TTA	T	830.99	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=0.339;DP=505;FS=13.773;HRun=0;HaplotypeScore=75.0162;InbreedingCoeff=0.9903;MQ=68.45;MQ0=1;MQRankSum=1.504;QD=29.68;ReadPosRankSum=-3.332;VQSLOD=3.0599;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:72.19:0,72,1196	0/0:16,0:16:29.24:0,29,405	0/0:15,0:11:25.17:0,25,281	0/0:9,0:8:21.02:0,21,246	0/0:26,0:26:69.05:0,69,1101	0/0:20,0:20:60.18:0,60,1014	0/0:14,0:14:42.14:0,42,721	1/1:0,28:28:72.13:926,72,0	0/0:15,0:15:45.04:0,45,752	0/0:20,0:20:60.18:0,60,968	0/0:26,0:25:72.05:0,72,1158	0/0:13,0:13:37.82:0,38,328	0/0:22,0:22:62.98:0,63,557	0/0:11,0:11:31.69:0,32,261	0/0:19,0:19:49.34:0,49,322	0/0:9,0:9:23.27:0,23,142	0/0:15,0:15:44.85:0,45,390	0/0:12,0:12:33.11:0,33,579	0/0:20,0:20:60.14:0,60,929	0/0:23,0:23:69.18:0,69,1136	0/0:12,0:11:36.09:0,36,575	0/0:12,0:12:36.01:0,36,331	0/0:17,0:17:49.82:0,50,446	0/0:18,0:18:54.01:0,54,485	0/0:22,0:22:65.97:0,66,1017	0/0:30,0:30:87.24:0,87,1390	0/0:13,0:13:39.09:0,39,620	0/0:23,0:23:69.22:0,69,1184
chr10	43895621	.	T	TA	1608.55	PASS	AC=16;AF=0.333;AN=48;BaseQRankSum=-1.002;DP=676;FS=11.140;HRun=5;HaplotypeScore=31.1454;InbreedingCoeff=0.8503;MQ=20.36;MQ0=203;MQRankSum=-1.143;QD=14.62;ReadPosRankSum=0.561;VQSLOD=1.4019;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:7:2.97:0,3,20	1/1:0,3:3:9.03:118,9,0	./.	./.	0/0:39,0:22:42:0,42,434	0/0:33,0:15:27.03:0,27,277	0/0:38,0:5:8.98:0,9,84	./.	0/0:24,0:9:9.02:0,9,97	0/0:36,1:18:8.68:0,9,443	0/0:37,0:20:42.10:0,42,450	1/1:7,9:9:24.08:316,24,0	1/1:5,9:10:24.08:315,24,0	1/1:10,11:7:15.05:197,15,0	0/0:37,0:21:30.07:0,30,322	0/0:21,0:10:21.05:0,21,225	1/1:18,5:6:11.93:134,12,0	0/0:32,0:6:9.02:0,9,97	0/0:18,0:2:6.02:0,6,64	0/0:35,0:18:47.99:0,48,486	./.	1/1:3,6:7:15.05:197,15,0	1/1:5,13:14:36.11:473,36,0	1/1:3,3:2:3.01:39,3,0	0/0:16,0:8:17.98:0,18,179	0/0:25,0:11:27.07:0,27,290	0/0:41,0:15:33.04:0,33,342	0/0:17,0:5:15.04:0,15,161
chr10	43896313	.	AC	A	1053.02	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=3.174;DP=690;FS=0.728;HRun=1;HaplotypeScore=53.5120;InbreedingCoeff=0.8211;MQ=44.85;MQ0=38;MQRankSum=3.228;QD=22.89;ReadPosRankSum=-0.732;VQSLOD=3.3592;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:35:90.31:0,90,1433	0/0:19,0:15:42.14:0,42,670	0/0:7,0:1:3:0,3,28	0/0:10,0:2:3.01:0,3,37	0/0:34,0:32:75.24:0,75,1172	0/0:19,0:19:42.14:0,42,670	0/0:24,0:16:36.12:0,36,574	0/0:36,0:11:33.11:0,33,527	0/0:26,0:26:57.19:0,57,910	0/0:38,0:36:99:0,105,1677	0/0:25,0:24:36.12:0,36,572	0/0:22,0:21:45.15:0,45,718	0/0:27,0:25:51.17:0,51,812	0/0:25,0:24:42.14:0,42,669	1/1:0,19:19:27.09:377,27,0	1/1:0,27:27:57.19:797,57,0	0/0:24,0:20:45.15:0,45,718	0/0:16,0:16:39.13:0,39,623	0/0:24,0:10:30.09:0,30,457	0/0:34,0:28:63.21:0,63,1003	0/0:25,0:23:54.18:0,54,863	0/0:29,0:27:63.21:0,63,1004	0/0:23,0:23:48.16:0,48,765	0/0:20,0:19:36.12:0,36,575	0/0:32,0:30:60.20:0,60,957	0/0:33,0:29:87.28:0,87,1368	0/0:22,0:22:45.15:0,45,715	0/0:12,0:12:9.03:0,9,144
chr10	43897856	.	TCC	T	656.15	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=0.392;DP=526;FS=25.496;HRun=3;HaplotypeScore=94.5437;InbreedingCoeff=0.9191;MQ=49.12;MQ0=26;MQRankSum=-1.148;QD=17.73;ReadPosRankSum=0.710;VQSLOD=-0.0170;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:25:59.65:0,60,472	0/0:12,0:12:24.11:0,24,193	0/0:20,0:10:29.79:0,30,307	0/0:26,0:15:29.27:0,29,265	0/0:17,0:17:40.39:0,40,326	0/0:16,0:16:35.74:0,36,327	0/0:16,0:14:37.43:0,37,306	0/0:35,0:29:60.09:0,60,403	0/0:23,0:22:53.33:0,53,417	0/0:18,0:17:26.39:0,26,343	0/0:17,0:16:38.43:0,38,308	0/0:11,0:11:26.78:0,27,202	0/0:11,0:10:28.39:0,28,218	0/0:11,0:11:28.09:0,28,218	1/1:21,3:23:53.79:463,54,0	1/1:12,1:13:35.92:315,36,0	0/0:12,0:11:4.08:0,4,95	0/0:20,0:18:51.73:0,52,377	0/0:14,0:13:28.12:0,28,223	0/0:20,0:20:56.96:0,57,486	0/0:31,0:28:62.81:0,63,526	0/0:21,0:19:25.83:0,26,195	0/0:20,0:20:17.06:0,17,115	0/0:17,0:16:26.87:0,27,214	0/0:12,0:12:32.48:0,32,264	0/0:31,0:29:66.91:0,67,592	0/0:16,0:15:38.85:0,39,315	0/0:12,0:10:29.51:0,30,225
chr10	43897858	.	CCTCTCTCTCTCTCTCTCTCTCTCTCT	C	2332.57	PASS	AB=0.842;AC=16;AF=0.286;AN=56;BaseQRankSum=4.572;DP=540;FS=0.000;HRun=0;HaplotypeScore=293.3069;InbreedingCoeff=0.6008;MQ=47.14;MQ0=39;MQRankSum=-4.336;QD=15.15;ReadPosRankSum=2.304;VQSLOD=1.8836;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:23:21.43:0,21,392	0/1:8,0:12:12.96:285,0,13	0/0:19,0:9:3.01:0,3,41	0/0:24,0:13:9.50:0,10,150	0/0:15,0:17:39.12:0,39,1093	0/0:18,0:17:20.98:0,21,787	0/0:15,0:13:9.03:0,9,299	0/0:40,0:33:52.54:0,53,776	0/0:23,0:22:33.11:0,33,1838	0/0:19,0:19:39.04:0,39,1022	0/0:17,0:15:24.05:0,24,587	1/1:11,0:11:5.18:194,5,0	1/1:11,0:10:11.07:326,11,0	1/1:11,1:11:15.01:471,15,0	0/1:23,0:22:0.38:0,0,677	0/1:13,0:12:33.52:34,0,537	1/1:10,0:11:11.55:213,12,0	0/0:18,0:18:27.07:0,27,857	0/0:16,0:15:26.05:0,26,505	0/0:20,0:20:36.03:0,36,980	0/0:32,0:28:39.11:0,39,1231	0/1:10,12:19:1.94:385,0,2	1/1:2,17:19:12.04:447,12,0	1/1:10,8:15:2.52:151,3,0	0/0:13,0:14:18.06:0,18,539	0/0:27,0:29:60.15:0,60,1611	0/0:15,0:15:27.06:0,27,705	0/0:14,0:10:14.98:0,15,225
chr10	43897933	.	T	TCTGC	6680.33	PASS	AB=0.564;AC=39;AF=0.722;AN=54;BaseQRankSum=2.240;DP=527;FS=0.000;HRun=0;HaplotypeScore=137.6201;InbreedingCoeff=0.5697;MQ=55.95;MQ0=12;MQRankSum=-2.503;QD=16.74;ReadPosRankSum=-2.460;VQSLOD=4.1223;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:21:38.99:532,39,0	1/1:8,0:9:12.04:162,12,0	0/0:27,0:23:54.11:0,54,821	0/0:27,0:14:18.06:0,18,293	1/1:5,12:18:19.22:257,19,0	0/0:16,0:15:1.35:0,1,479	0/0:17,0:16:21.07:0,21,333	0/0:15,0:15:27.05:0,27,441	0/0:13,0:13:4.85:0,5,265	1/1:19,0:18:30.10:477,30,0	1/1:3,12:14:18.02:337,18,0	0/1:4,0:15:24.91:95,0,25	1/1:14,0:14:25.40:391,25,0	1/1:6,0:18:9.03:101,9,0	1/1:29,0:29:25.33:493,25,0	0/1:7,24:33:26.96:371,0,27	./.	1/1:5,13:20:2.36:252,2,0	1/1:13,0:13:26.95:373,27,0	1/1:18,0:18:20.09:249,20,0	1/1:19,0:19:39.13:644,39,0	1/1:18,0:19:9.03:123,9,0	1/1:20,0:19:15.04:175,15,0	1/1:8,0:8:6.02:103,6,0	1/1:2,16:18:6.02:149,6,0	1/1:10,18:28:50.97:773,51,0	1/1:27,1:27:26.88:552,27,0	0/1:3,10:13:9.98:69,0,10
chr10	43897945	.	C	CCTGCCTAT	8434.09	PASS	AB=0.886;AC=35;AF=0.648;AN=54;BaseQRankSum=2.888;DP=597;FS=1.520;HRun=0;HaplotypeScore=154.2044;InbreedingCoeff=-0.0706;MQ=51.73;MQ0=17;MQRankSum=-3.878;QD=16.10;ReadPosRankSum=1.683;VQSLOD=3.9172;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:25:43.34:666,43,0	1/1:14,0:14:27.09:436,27,0	0/0:22,0:18:54.11:0,54,821	0/0:20,0:8:18.06:0,18,293	0/1:22,0:22:99:181,0,128	0/1:12,0:17:99:129,0,477	0/1:17,0:15:41.80:42,0,306	0/0:18,0:17:27.05:0,27,441	0/1:8,0:16:94.70:95,0,256	1/1:8,15:25:18.02:961,18,0	0/1:21,0:20:99:166,0,202	1/1:20,0:18:16.28:165,16,0	1/1:16,0:16:33.09:411,33,0	1/1:16,0:16:8.98:106,9,0	0/1:4,30:38:54.32:944,0,54	0/1:32,0:32:61.99:214,0,62	./.	0/1:20,0:20:75.34:128,0,75	1/1:13,0:11:27.09:420,27,0	0/1:6,14:24:19.49:359,0,19	0/1:24,0:24:99:498,0,205	1/1:22,0:22:20.85:272,21,0	1/1:25,0:23:30.09:369,30,0	1/1:7,0:7:9.03:149,9,0	0/1:28,0:27:36.32:36,0,181	0/1:28,0:28:99:537,0,262	1/1:2,26:35:29.99:1134,30,0	0/1:14,0:14:17.96:18,0,88
chr10	43900124	.	GCTGA	G	6817.72	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=14.101;DP=614;FS=11.046;HRun=0;HaplotypeScore=110.5788;InbreedingCoeff=0.9994;MQ=83.11;MQ0=0;MQRankSum=-2.790;QD=50.88;ReadPosRankSum=5.325;VQSLOD=5.5099;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,111,2792	0/0:11,0:11:30.10:0,30,821	0/0:17,0:17:32.15:0,32,751	0/0:22,0:22:44.92:0,45,965	0/0:14,0:14:39.12:0,39,969	0/0:17,0:17:51.18:0,51,1396	0/0:26,0:26:78.27:0,78,2017	0/0:21,0:21:57.17:0,57,1300	0/0:15,0:15:45.14:0,45,1094	0/0:17,0:17:42.14:0,42,1125	0/0:20,0:20:57.20:0,57,1525	1/1:0,20:20:54.19:1046,54,0	1/1:0,18:18:45.15:865,45,0	1/1:1,19:21:63.22:1205,63,0	0/0:25,0:25:75.24:0,75,1923	0/0:14,0:14:42.14:0,42,1150	0/0:40,0:40:99:0,117,3151	0/0:27,0:27:78.27:0,78,2051	0/0:22,0:22:66.23:0,66,1738	0/0:21,0:21:60.21:0,60,1568	0/0:41,0:40:99:0,117,2965	1/1:2,15:17:45.15:864,45,0	1/1:2,18:20:54.07:921,54,0	1/1:2,36:38:99:1917,99,0	0/0:19,0:19:57.20:0,57,1561	0/0:17,0:17:51.17:0,51,1337	0/0:25,0:25:72.25:0,72,1892	0/0:9,0:9:24.08:0,24,551
chr10	43900215	.	TTC	T	536.42	PASS	AC=2;AF=0.050;AN=40;BaseQRankSum=4.653;DP=372;FS=0.000;HRun=0;HaplotypeScore=58.6295;InbreedingCoeff=0.9465;MQ=59.48;MQ0=6;MQRankSum=1.660;QD=24.38;ReadPosRankSum=-2.027;VQSLOD=3.1189;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,113,1610	./.	0/0:10,0:7:21.06:0,21,312	0/0:9,0:6:15:0,15,192	0/0:18,0:18:50.85:0,51,729	0/0:10,0:10:30.10:0,30,498	0/0:17,0:17:48.13:0,48,712	1/1:3,19:20:53.95:628,54,0	0/0:19,0:19:57.17:0,57,883	0/0:25,0:25:71.80:0,72,945	0/0:22,0:22:66.18:0,66,998	./.	./.	./.	0/0:16,0:15:45.10:0,45,645	0/0:8,0:8:21.06:0,21,349	./.	0/0:17,0:17:45.01:0,45,591	0/0:25,0:25:67.70:0,68,978	0/0:19,0:18:51.09:0,51,697	0/0:23,0:23:62.28:0,62,854	./.	./.	./.	0/0:11,0:11:33.08:0,33,479	0/0:25,0:25:75.21:0,75,1075	0/0:30,0:30:83.90:0,84,1238	0/0:4,0:4:12.02:0,12,172
chr10	43901641	.	T	TC	801.85	PASS	AB=0.833;AC=5;AF=0.089;AN=56;BaseQRankSum=-2.912;DP=545;FS=11.879;HRun=1;HaplotypeScore=178.0986;InbreedingCoeff=0.7305;MQ=58.07;MQ0=20;MQRankSum=2.753;QD=14.58;ReadPosRankSum=2.920;VQSLOD=2.3179;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:27:54.45:0,54,291	0/0:7,0:7:15.35:0,15,82	0/0:15,0:11:27.77:0,28,213	0/0:13,0:10:20.72:0,21,156	0/0:28,0:25:48.33:0,48,276	0/0:22,0:20:40.52:0,41,412	0/0:28,0:27:53.88:0,54,568	1/1:3,21:24:59.88:515,60,0	0/0:11,0:11:16.73:0,17,149	0/0:34,0:33:61.65:0,62,374	0/0:24,0:22:45.72:0,46,314	0/0:16,0:16:25.38:0,25,166	0/0:14,0:13:17.94:0,18,109	0/0:17,0:17:31.10:0,31,209	1/1:10,6:15:23.76:259,24,0	0/1:12,3:14:17.23:156,0,17	0/0:17,0:16:35.13:0,35,284	0/0:19,0:17:31.59:0,32,205	0/0:17,0:17:35.38:0,35,205	0/0:15,0:13:18.25:0,18,107	0/0:15,0:15:29.45:0,29,208	0/0:17,0:16:24.84:0,25,211	0/0:16,0:16:31.92:0,32,258	0/0:25,0:25:40.41:0,40,317	0/0:29,0:27:44.72:0,45,252	0/0:30,0:30:60.44:0,60,391	0/0:23,0:22:42.67:0,43,262	0/0:7,0:7:5.61:0,6,25
chr10	43901661	.	C	CT	747.67	PASS	AB=0.905;AC=22;AF=0.407;AN=54;BaseQRankSum=0.639;DP=521;FS=7.871;HRun=16;HaplotypeScore=85.8243;InbreedingCoeff=-0.0409;MQ=34.07;MQ0=33;MQRankSum=-1.976;QD=1.97;ReadPosRankSum=-0.491;VQSLOD=-0.7398;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:35,2:31:20.27:82,0,20	0/0:5,0:6:1.88:0,2,5	0/1:3,0:2:0:0,0,0	./.	0/1:23,9:29:7.10:35,0,7	0/0:22,0:19:22.22:0,22,121	0/1:23,0:22:10.65:17,0,11	0/0:24,1:27:0.72:0,1,82	0/0:9,0:9:5.67:0,6,32	0/1:27,4:30:15.52:69,0,16	0/1:20,3:20:11.43:74,0,11	0/0:13,0:13:13.36:0,13,69	0/0:16,0:15:11.37:0,11,66	0/0:15,0:15:16.59:0,17,96	1/1:17,0:18:10.07:71,10,0	1/1:15,0:15:14.99:72,15,0	0/1:15,0:11:0:1,0,0	0/1:16,0:15:8.64:36,0,9	0/1:19,0:18:21.40:25,0,21	1/1:11,3:12:5.95:43,6,0	1/1:9,0:10:2.96:19,3,0	0/0:13,0:12:8.60:0,9,50	0/0:17,0:16:13.50:0,14,78	0/1:25,0:25:8.63:9,0,76	0/1:22,4:23:16.59:54,0,17	0/1:23,10:34:7.35:155,0,7	0/1:18,3:19:29.67:85,0,30	0/1:4,6:10:14.66:57,0,15
chr10	43902598	.	CT	C	1426.65	PASS	AB=0.741;AC=36;AF=0.643;AN=56;BaseQRankSum=2.273;DP=573;FS=8.192;HRun=15;HaplotypeScore=73.9547;InbreedingCoeff=0.2865;MQ=69.69;MQ0=9;MQRankSum=0.160;QD=3.54;ReadPosRankSum=5.868;VQSLOD=0.0335;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:20,29:51:32.52:290,0,33	1/1:7,2:10:10.84:62,11,0	0/0:52,0:16:31.38:0,31,191	0/0:44,1:17:18.04:0,18,149	1/1:11,8:20:5.50:38,6,0	0/1:10,2:13:7.26:7,0,169	0/1:13,3:19:32.76:33,0,145	0/0:21,0:17:23.52:0,24,146	0/0:14,1:16:16.53:0,17,247	0/1:16,7:23:64.56:65,0,98	1/1:11,3:17:22.88:130,23,0	1/1:7,0:17:16.24:47,16,0	1/1:3,0:9:8.13:23,8,0	1/1:10,0:14:1.91:6,2,0	0/0:16,0:19:14.78:0,15,109	0/0:14,3:16:1.54:0,2,110	1/1:10,13:25:3.63:122,4,0	1/1:2,16:20:33.55:204,34,0	0/1:15,9:25:1.10:110,0,1	1/1:5,8:15:16.70:102,17,0	1/1:6,4:10:5.86:37,6,0	1/1:5,0:16:12.12:35,12,0	1/1:7,0:22:22.32:65,22,0	1/1:6,0:19:16.14:56,16,0	0/1:10,5:15:22.95:23,0,26	0/1:11,5:19:36.88:37,0,55	0/1:13,8:22:4.56:95,0,5	1/1:1,1:1:2.96:19,3,0
chr10	43903308	.	TAATAAATA	T	4402.80	PASS	AC=22;AF=0.478;AN=46;BaseQRankSum=1.628;DP=288;FS=3.339;HRun=0;HaplotypeScore=77.5970;InbreedingCoeff=0.8067;MQ=64.07;MQ0=0;MQRankSum=-7.534;QD=30.16;ReadPosRankSum=1.020;VQSLOD=4.4678;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,9:15:21.07:499,21,0	./.	./.	./.	0/0:4,0:14:29.89:0,30,235	0/0:2,0:9:17.98:0,18,147	./.	0/0:28,0:28:30.09:0,30,1011	0/0:6,0:7:5.99:0,6,48	1/1:5,6:11:15.05:378,15,0	1/1:6,6:12:18.06:449,18,0	0/0:6,0:7:6.01:0,6,74	0/0:0,0:3:3:0,3,25	0/0:4,0:6:5.99:0,6,49	0/0:4,0:4:6.02:0,6,241	0/0:10,0:10:24.08:0,24,960	0/0:22,0:22:51.15:0,51,1980	1/1:16,10:26:15.05:373,15,0	1/1:10,3:13:9.03:228,9,0	1/1:3,3:6:9.03:228,9,0	1/1:2,2:4:2.93:76,3,0	./.	0/0:4,0:5:3:0,3,25	0/0:5,0:9:11.99:0,12,98	1/1:2,11:13:24.08:604,24,0	1/1:6,9:15:27.08:586,27,0	1/1:6,8:14:17.98:451,18,0	1/1:6,11:17:21.07:532,21,0
chr10	43909749	.	TGATA	T	3973.02	PASS	AB=0.824;AC=33;AF=0.688;AN=48;BaseQRankSum=9.439;DP=560;FS=1.274;HRun=0;HaplotypeScore=95.8722;InbreedingCoeff=0.6906;MQ=68.79;MQ0=3;MQRankSum=0.987;QD=10.62;ReadPosRankSum=-1.311;VQSLOD=2.7333;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:18,14:32:5.63:298,0,6	./.	./.	./.	1/1:12,5:17:18.03:236,18,0	0/0:27,0:26:39.12:0,39,866	1/1:17,2:19:6:92,6,0	0/1:20,0:20:0:0,0,0	0/0:27,0:27:30.10:0,30,699	0/0:26,0:26:36.12:0,36,810	1/1:10,12:22:27.05:380,27,0	1/1:6,10:16:21.07:322,21,0	1/1:13,5:18:12.04:184,12,0	1/1:17,12:29:33.11:506,33,0	1/1:7,0:14:5.68:56,6,0	1/1:4,0:19:21.02:195,21,0	1/1:15,0:28:6.48:57,6,0	1/1:14,8:22:9.03:138,9,0	1/1:12,4:16:9.03:138,9,0	0/0:20,0:20:24.08:0,24,560	0/0:15,0:16:15.04:0,15,337	1/1:12,6:18:5.90:66,6,0	1/1:9,12:21:21.07:322,21,0	1/1:5,15:20:29.77:425,30,0	1/1:10,12:22:21.07:322,21,0	0/1:15,6:21:47.83:233,0,48	0/0:22,0:22:45.15:0,45,1045	./.
chr10	43910199	.	ATCTTT	A	9323.55	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=1.474;DP=403;FS=5.884;HRun=0;HaplotypeScore=85.0464;InbreedingCoeff=0.9585;MQ=71.05;MQ0=9;MQRankSum=-3.391;QD=44.61;ReadPosRankSum=5.410;VQSLOD=4.5730;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,16:18:39.13:811,39,0	0/0:6,0:6:15.04:0,15,351	0/0:14,0:11:23.97:0,24,328	0/0:19,0:14:15.95:0,16,189	1/1:1,27:29:78.04:1382,78,0	0/0:19,0:18:47.67:0,48,995	0/0:5,0:5:12.03:0,12,277	0/0:30,0:26:75.17:0,75,1727	0/0:6,0:6:12.03:0,12,263	1/1:3,15:15:45.13:861,45,0	1/1:1,18:20:53.93:923,54,0	0/0:10,0:10:26.06:0,26,447	0/0:12,0:12:33.08:0,33,536	0/0:7,0:7:18.03:0,18,284	0/0:18,0:18:48.14:0,48,857	0/0:14,0:14:36.05:0,36,632	0/0:16,0:14:24.07:0,24,587	1/1:0,8:8:12.04:230,12,0	1/1:0,15:15:36.05:615,36,0	1/1:2,16:17:47.80:860,48,0	1/1:1,1:2:6.01:76,6,0	0/0:4,0:4:12:0,12,128	0/0:8,0:8:21.04:0,21,314	0/0:6,0:6:14.05:0,14,205	1/1:3,15:18:39.13:829,39,0	1/1:0,25:26:72.20:1373,72,0	1/1:2,19:21:39.13:843,39,0	1/1:1,14:14:23.84:520,24,0
chr10	43910201	.	CT	C	1499.23	PASS	AB=0.757;AC=41;AF=0.732;AN=56;BaseQRankSum=7.881;DP=409;FS=0.000;HRun=16;HaplotypeScore=86.6740;InbreedingCoeff=0.5780;MQ=68.80;MQ0=12;MQRankSum=-1.431;QD=4.79;ReadPosRankSum=5.469;VQSLOD=1.7976;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:19:25.51:78,26,0	0/0:4,0:10:11.52:0,12,68	0/0:12,0:9:1.56:0,2,5	0/0:16,0:12:2.98:0,3,22	1/1:28,0:28:37.99:118,38,0	0/1:15,4:18:21.16:21,0,158	0/0:6,0:6:8.98:0,9,72	0/0:29,2:27:38.68:0,39,400	0/1:5,1:6:3.05:3,0,81	1/1:18,0:15:25.65:77,26,0	1/1:19,0:19:27.32:83,27,0	0/1:3,7:10:8.28:72,0,8	1/1:4,9:15:21.66:119,22,0	1/1:3,4:7:8.78:54,9,0	1/1:4,15:20:39.27:237,39,0	1/1:2,10:12:29.38:179,29,0	0/0:6,0:19:20.20:0,20,121	1/1:9,0:8:5.63:16,6,0	1/1:15,0:15:16.78:51,17,0	1/1:17,0:17:25.54:80,26,0	1/1:2,0:2:2.85:15,3,0	1/1:3,1:4:2.93:18,3,0	1/1:3,4:7:8.72:54,9,0	1/1:2,3:5:8.11:53,8,0	1/1:15,0:15:27.21:81,27,0	1/1:27,0:27:42.13:127,42,0	1/1:20,0:20:26.48:83,26,0	1/1:17,0:14:16.21:51,16,0
chr10	43911630	.	TTG	T	4869.86	PASS	AB=0.817;AC=25;AF=0.446;AN=56;BaseQRankSum=1.574;DP=742;FS=1.582;HRun=0;HaplotypeScore=123.4870;InbreedingCoeff=0.6882;MQ=63.72;MQ0=14;MQRankSum=6.625;QD=13.31;ReadPosRankSum=2.366;VQSLOD=4.8777;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:14,18:32:9.68:514,10,0	0/0:9,0:18:3:0,3,26	0/0:31,0:15:6.02:0,6,75	0/0:31,0:19:5.88:0,6,51	0/1:9,18:27:4.01:355,0,4	0/1:17,1:18:3.96:4,0,380	0/0:23,0:23:36.11:0,36,531	0/0:28,0:27:15.04:0,15,180	0/1:33,4:37:14.90:15,0,1074	1/1:10,13:24:43.95:442,44,0	1/1:2,15:18:44.79:471,45,0	0/0:17,0:25:9.46:0,9,79	0/0:11,0:20:9:0,9,79	0/0:9,0:24:30.46:0,30,274	0/0:15,0:27:3.46:0,3,27	0/0:17,0:32:6.45:0,6,53	0/0:17,0:26:12.02:0,12,129	1/1:9,12:22:25.85:325,26,0	1/1:15,5:19:15.04:170,15,0	1/1:14,13:29:35.77:368,36,0	1/1:17,27:45:56.78:627,57,0	0/0:14,0:24:12.47:0,12,106	0/0:16,0:27:9.09:0,9,62	0/0:21,0:39:11.55:0,12,96	1/1:6,13:20:32.93:355,33,0	1/1:12,16:29:52.63:543,53,0	1/1:17,18:35:48.14:545,48,0	1/1:2,4:6:12.03:136,12,0
chr10	43912167	.	TC	T	598.41	PASS	AB=0.778;AC=18;AF=0.391;AN=46;BaseQRankSum=6.477;DP=195;FS=0.000;HRun=2;HaplotypeScore=68.2780;InbreedingCoeff=-0.1972;MQ=32.24;MQ0=3;MQRankSum=-1.257;QD=4.68;ReadPosRankSum=3.812;VQSLOD=0.6504;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:7,1:8:5.15:0,5,161	1/1:2,4:6:14.06:143,14,0	0/0:4,0:1:3.01:0,3,45	./.	0/1:3,4:7:0:0,0,0	0/1:6,6:12:98.82:167,0,99	0/0:13,3:14:3.67:0,4,219	0/1:12,3:15:56.13:56,0,321	0/1:7,3:9:51.33:51,0,147	0/1:8,1:7:13.58:14,0,158	./.	0/1:6,2:7:22.97:23,0,102	0/1:4,2:6:10.81:11,0,46	0/1:5,2:7:42.98:43,0,71	./.	./.	0/0:9,0:10:22.40:0,22,307	0/0:1,0:1:2.84:0,3,14	0/1:2,1:3:26.76:27,0,38	1/1:2,1:3:3.01:39,3,0	0/0:11,1:12:6.47:0,6,67	0/1:11,6:17:31.90:32,0,118	1/1:2,5:7:8.98:91,9,0	0/1:8,1:9:7.55:8,0,97	0/0:6,0:6:9.03:0,9,126	0/1:6,2:9:33.47:33,0,145	./.	0/0:2,0:2:3.01:0,3,45
chr10	43913975	.	CCT	C	128.30	PASS	AB=0.856;AC=7;AF=0.125;AN=56;BaseQRankSum=6.178;DP=310;FS=4.259;HRun=0;HaplotypeScore=73.8223;InbreedingCoeff=-0.1411;MQ=67.33;MQ0=3;MQRankSum=-1.850;QD=1.78;ReadPosRankSum=2.278;VQSLOD=1.4076;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,2:21:36.31:0,36,989	0/0:3,0:3:9.03:0,9,176	0/0:22,0:13:29.54:0,30,408	0/1:19,0:11:9.21:9,0,268	0/0:15,1:16:16.41:0,16,273	0/0:7,0:7:18.06:0,18,364	0/0:13,1:15:41.26:0,41,756	0/1:6,4:10:99:137,0,160	0/0:11,1:12:31.66:0,32,591	0/0:10,0:10:30.10:0,30,539	0/0:9,3:12:15.97:0,16,273	0/0:6,3:9:17.45:0,17,357	0/0:4,2:6:10.01:0,10,185	0/1:8,2:10:2.44:2,0,456	0/0:12,0:12:33.11:0,33,631	0/0:6,4:10:22.41:0,22,336	0/0:4,0:4:8.98:0,9,158	0/0:6,0:6:18.06:0,18,365	0/1:9,2:11:51.27:51,0,385	0/0:7,1:8:11.17:0,11,329	0/0:13,1:14:34.61:0,35,544	0/0:10,1:11:22:0,22,413	0/0:8,3:11:22.75:0,23,372	0/0:12,1:13:11.68:0,12,219	0/0:16,0:16:42.12:0,42,756	0/1:8,1:9:9.01:9,0,438	0/1:8,1:9:12.26:12,0,415	0/1:3,1:4:26.37:26,0,151
chr10	43913982	.	TCC	T	2761.44	PASS	AB=0.859;AC=33;AF=0.589;AN=56;BaseQRankSum=-1.911;DP=324;FS=16.282;HRun=11;HaplotypeScore=65.7089;InbreedingCoeff=0.6353;MQ=68.68;MQ0=4;MQRankSum=-1.328;QD=13.09;ReadPosRankSum=4.542;VQSLOD=0.4421;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,13:23:35.83:364,36,0	0/0:2,0:2:2.97:0,3,20	0/0:25,0:14:28.36:0,28,240	0/1:17,0:11:12.14:12,0,132	1/1:5,10:15:21.04:224,21,0	0/1:6,1:7:19.99:20,0,51	0/0:11,0:14:34.78:0,35,208	1/1:10,0:10:10.70:44,11,0	0/0:10,0:12:20.35:0,20,125	1/1:4,8:12:24.04:255,24,0	1/1:5,6:11:15.51:162,16,0	0/0:8,1:10:8.65:0,9,79	0/0:8,0:8:3.45:0,3,69	0/1:8,0:10:5.94:6,0,80	1/1:2,12:14:27.05:287,27,0	1/1:5,7:12:16.02:188,16,0	0/0:5,0:5:14.79:0,15,145	1/1:2,4:6:9:96,9,0	1/1:5,6:11:18.36:197,18,0	1/1:6,3:9:13.20:118,13,0	1/1:9,5:14:15.46:159,15,0	0/0:9,0:10:13.31:0,13,64	0/0:10,0:10:2.48:0,2,9	0/0:13,1:16:2.21:0,2,95	1/1:2,13:15:36.07:382,36,0	1/1:3,5:8:17.53:169,18,0	1/1:1,9:10:23.73:235,24,0	1/1:3,1:4:5.37:40,5,0
chr10	43913987	.	C	CTT	699.06	PASS	AB=0.830;AC=15;AF=0.268;AN=56;BaseQRankSum=3.198;DP=330;FS=17.367;HRun=0;HaplotypeScore=84.1315;InbreedingCoeff=-0.3698;MQ=68.79;MQ0=4;MQRankSum=-4.929;QD=4.34;ReadPosRankSum=-0.558;VQSLOD=1.1461;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:21,2:23:9.59:10,0,404	0/0:2,0:2:6.02:0,6,71	0/0:27,0:15:39.03:0,39,434	0/0:21,0:12:15.06:0,15,275	0/0:14,1:15:19.56:0,20,163	0/0:5,0:5:14.97:0,15,165	0/1:13,1:14:8.60:9,0,375	0/1:6,4:10:72.74:196,0,73	0/1:13,1:14:16.43:16,0,292	0/0:14,0:14:32.91:0,33,329	0/1:8,3:11:3.10:3,0,104	0/1:7,3:10:82.20:82,0,183	0/1:6,2:8:61.49:61,0,164	0/1:8,2:10:72.39:72,0,225	0/0:17,0:17:35.68:0,36,325	0/1:8,4:12:99:137,0,158	0/0:5,0:5:15.05:0,15,204	0/0:7,0:7:17.99:0,18,182	0/1:8,2:10:72.73:73,0,206	0/1:9,1:10:38.02:38,0,116	0/0:13,1:14:16.91:0,17,162	0/0:8,1:9:0.76:0,1,163	0/1:5,3:8:21.84:45,0,22	0/0:17,1:18:27.45:0,27,302	0/0:15,0:15:38.97:0,39,340	0/1:6,1:7:29.36:29,0,131	0/1:10,1:11:26.70:27,0,196	0/1:2,1:3:17.48:51,0,17
chr10	43914368	.	TTGTGTG	T	4892.07	PASS	AB=0.681;AC=36;AF=0.643;AN=56;BaseQRankSum=9.617;DP=727;FS=1.748;HRun=0;HaplotypeScore=175.9736;InbreedingCoeff=0.5839;MQ=54.87;MQ0=12;MQRankSum=-1.459;QD=9.71;ReadPosRankSum=1.282;VQSLOD=3.5372;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:28,7:36:9.69:455,10,0	0/0:9,0:9:24.06:0,24,665	0/0:31,0:12:3.01:0,3,46	0/0:40,0:31:21.07:0,21,350	1/1:15,17:32:38.24:490,38,0	0/0:19,0:20:42.14:0,42,1133	1/1:13,1:22:6.49:46,6,0	0/0:35,0:35:41.46:0,41,765	0/0:31,0:32:56.07:0,56,1619	1/1:17,12:29:27.04:477,27,0	1/1:12,10:22:21.07:365,21,0	0/1:17,1:31:86:86,0,120	1/1:11,0:29:7.50:16,7,0	1/1:14,2:25:12.22:135,12,0	0/1:11,1:25:3.86:62,0,4	1/1:10,0:26:10.20:19,10,0	0/0:27,0:28:57.18:0,57,1586	1/1:13,2:14:0.78:58,1,0	1/1:7,6:12:21.04:354,21,0	1/1:10,7:20:17.73:269,18,0	0/1:30,10:39:29.69:41,0,30	0/0:13,0:27:7.77:0,8,111	1/1:15,1:24:7.54:45,8,0	0/1:7,1:22:5.85:40,0,6	1/1:8,14:23:21.89:368,22,0	1/1:16,13:31:48.06:861,48,0	1/1:19,11:31:28.21:584,28,0	1/1:4,2:5:6.02:119,6,0
chr10	43915777	.	A	ATGTCTGTC	13943.08	PASS	AB=0.617;AC=39;AF=0.696;AN=56;BaseQRankSum=-3.293;DP=614;FS=9.443;HRun=0;HaplotypeScore=165.4299;InbreedingCoeff=0.8569;MQ=70.09;MQ0=3;MQRankSum=-5.342;QD=33.60;ReadPosRankSum=1.864;VQSLOD=4.1770;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:20,12:37:30.09:1123,30,0	0/0:3,0:4:9.03:0,9,182	0/0:37,0:32:23.96:0,24,453	0/0:42,0:34:17.07:0,17,385	1/1:7,13:23:18.06:735,18,0	0/0:23,0:23:51.12:0,51,1136	0/0:23,0:23:39.11:0,39,904	0/0:37,0:37:40.73:0,41,852	0/0:15,0:15:36.12:0,36,875	1/1:5,12:20:48.10:1579,48,0	1/1:7,5:16:20.99:650,21,0	1/1:3,0:16:29.95:244,30,0	1/1:5,0:19:38.95:319,39,0	1/1:6,0:18:26.97:220,27,0	1/1:9,10:20:18.06:738,18,0	1/1:2,11:14:21.07:862,21,0	0/0:16,0:16:30.03:0,30,677	1/1:8,10:20:18.06:730,18,0	1/1:10,8:20:33.84:777,34,0	1/1:17,5:25:12.03:392,12,0	1/1:17,5:25:7.28:360,7,0	1/1:6,0:15:23.96:195,24,0	1/1:4,0:9:11.48:83,11,0	0/1:11,0:29:46.12:191,0,46	1/1:2,8:12:15.05:618,15,0	1/1:7,19:28:60.06:2017,60,0	1/1:17,18:36:48.16:1861,48,0	1/1:7,4:11:6.02:248,6,0
chr10	43920095	.	CA	C	1254.41	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.693;DP=710;FS=4.203;HRun=1;HaplotypeScore=71.0559;InbreedingCoeff=0.9957;MQ=78.72;MQ0=0;MQRankSum=-1.608;QD=27.27;ReadPosRankSum=3.303;VQSLOD=3.6006;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,132,2019	0/0:6,0:6:18.03:0,18,256	0/0:18,0:18:49.84:0,50,654	0/0:22,0:22:53.62:0,54,740	0/0:14,0:14:42.13:0,42,647	0/0:25,0:25:75.24:0,75,1174	0/0:24,0:24:72.23:0,72,1128	0/0:28,0:28:81.24:0,81,1194	0/0:40,0:40:99:0,120,1849	0/0:25,0:25:75.25:0,75,1178	0/0:16,0:16:45.13:0,45,673	0/0:30,0:30:90.31:0,90,1435	0/0:19,0:19:57.18:0,57,885	0/0:33,0:33:96.33:0,96,1529	1/1:0,24:24:50.96:709,51,0	1/1:0,22:22:48.16:667,48,0	0/0:43,0:43:99:0,129,1901	0/0:29,0:29:87.23:0,87,1306	0/0:26,0:26:78.24:0,78,1185	0/0:19,0:19:54.17:0,54,839	0/0:37,0:37:99:0,108,1671	0/0:26,0:26:72.22:0,72,1092	0/0:19,0:19:51.16:0,51,789	0/0:28,0:28:81.26:0,81,1269	0/0:20,0:20:60.20:0,60,945	0/0:29,0:29:87.07:0,87,1310	0/0:30,0:30:90.27:0,90,1385	0/0:13,0:13:36.12:0,36,574
chr10	43920285	.	ATGCG	A	2484.17	PASS	AB=0.992;AC=22;AF=0.393;AN=56;BaseQRankSum=-10.344;DP=705;FS=6.296;HRun=0;HaplotypeScore=171.8580;InbreedingCoeff=-0.4472;MQ=72.48;MQ0=6;MQRankSum=0.915;QD=4.90;ReadPosRankSum=2.858;VQSLOD=2.3231;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:37,1:37:88.91:89,0,821	0/1:9,0:9:55.77:56,0,110	0/0:18,0:17:17.10:0,17,172	0/0:29,0:22:10:0,10,135	0/1:26,0:26:99:139,0,301	0/0:15,0:15:2.77:0,3,200	0/0:34,0:34:80.33:0,80,615	0/1:39,0:39:78.36:454,0,78	0/0:30,0:30:62.87:0,63,899	0/1:24,2:25:99:294,0,164	0/1:14,0:14:20.38:20,0,259	0/0:24,0:23:2.55:0,3,40	0/1:18,0:18:24.72:80,0,25	0/1:29,0:28:26.19:75,0,26	0/0:27,0:27:60.01:0,60,833	0/0:21,0:21:26.83:0,27,313	0/1:26,0:26:84.74:143,0,85	0/1:23,0:23:80.23:80,0,251	0/1:30,0:27:64.78:259,0,65	0/1:9,0:9:55.81:56,0,124	0/1:49,0:49:99:340,0,470	1/1:29,0:29:2.23:22,2,0	1/1:20,0:20:3.95:48,4,0	0/1:37,0:36:11.52:80,0,12	0/1:20,1:21:99:115,0,269	0/1:31,0:31:99:195,0,384	0/1:20,0:20:60.89:61,0,397	0/1:13,0:13:37.95:38,0,342
chr10	43920296	.	C	CGTGTGTGTGTGTGT	2906	PASS	AB=0.962;AC=28;AF=0.500;AN=56;BaseQRankSum=-5.325;DP=738;FS=16.056;HRun=0;HaplotypeScore=301.9244;InbreedingCoeff=0.0938;MQ=55.75;MQ0=10;MQRankSum=-0.688;QD=5.37;ReadPosRankSum=-5.554;VQSLOD=0.0292;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:45:57.19:0,57,2462	1/1:12,0:12:19.49:234,19,0	0/0:22,0:12:20.02:0,20,243	0/1:28,0:13:99:113,0,154	0/1:25,0:25:37.13:37,0,520	0/0:15,0:15:42:0,42,923	0/0:36,0:35:87.04:0,87,2137	1/1:31,0:31:37.38:352,37,0	0/0:27,0:26:69.04:0,69,1834	0/1:29,0:28:99:132,0,739	0/0:13,0:14:25.09:0,25,580	1/1:4,12:23:6:300,6,0	1/1:12,3:24:2.77:137,3,0	1/1:25,0:24:12.71:191,13,0	0/1:27,0:27:85.01:85,0,376	0/0:19,0:19:8.27:0,8,90	1/1:29,0:29:5.70:385,6,0	0/1:22,0:22:41.41:41,0,762	0/1:28,0:25:99:184,0,377	0/1:11,0:11:32.66:33,0,220	0/1:56,0:56:99:187,0,1191	1/1:6,15:35:2.37:155,2,0	0/1:6,1:24:0.51:122,0,1	1/1:38,1:37:19.89:266,20,0	0/1:19,0:19:35.79:36,0,854	0/1:32,0:31:93.60:94,0,874	0/1:19,0:19:2.57:3,0,766	0/0:16,0:16:7.08:0,7,781
chr10	43920298	.	TGC	T	4266.44	PASS	AB=0.966;AC=31;AF=0.554;AN=56;BaseQRankSum=-8.028;DP=733;FS=11.450;HRun=0;HaplotypeScore=144.3964;InbreedingCoeff=-0.2461;MQ=55.15;MQ0=11;MQRankSum=1.876;QD=6.76;ReadPosRankSum=-3.674;VQSLOD=3.2823;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:42,6:45:99:234,0,475	0/1:12,0:12:30.40:70,0,30	0/1:26,0:14:62.05:62,0,148	0/0:29,0:13:17.46:0,17,208	0/1:25,1:26:76.09:237,0,76	0/1:15,0:15:20.84:21,0,108	0/1:36,0:35:99:118,0,208	1/1:32,0:32:25.36:576,25,0	0/0:27,0:26:50.06:0,50,894	0/1:30,2:31:72.27:310,0,72	0/1:15,1:16:95.26:107,0,95	1/1:19,0:18:3.75:11,4,0	1/1:22,0:22:20.05:147,20,0	1/1:25,0:24:16.52:134,17,0	0/0:27,0:27:59.85:0,60,530	0/0:19,0:19:26.04:0,26,192	0/1:30,0:30:27.91:184,0,28	0/1:20,2:22:99:198,0,146	0/1:27,1:24:1.64:367,0,2	0/1:11,0:11:53.55:97,0,54	0/1:56,2:58:99:484,0,251	1/1:29,0:29:7.23:51,7,0	1/1:20,0:20:5.91:60,6,0	1/1:38,0:35:19.29:156,19,0	0/1:18,1:19:99:186,0,115	0/1:29,2:30:99:303,0,139	0/1:17,1:18:98.80:99,0,177	0/1:18,0:18:56.50:57,0,165
chr10	43921985	.	G	GACACACACAC	7405.07	PASS	AB=0.870;AC=42;AF=0.750;AN=56;BaseQRankSum=-0.914;DP=582;FS=1.344;HRun=0;HaplotypeScore=187.9170;InbreedingCoeff=0.6660;MQ=54.44;MQ0=7;MQRankSum=-4.028;QD=16.72;ReadPosRankSum=-1.152;VQSLOD=4.0317;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:16,9:27:6.02:274,6,0	1/1:4,0:4:3.01:66,3,0	1/1:26,0:15:1.82:5,2,0	0/1:23,0:14:0:0,0,0	1/1:13,7:22:5.65:290,6,0	0/0:25,0:25:54.18:0,54,1451	0/0:28,0:29:24.02:0,24,485	0/0:25,0:24:21.46:0,21,290	0/0:17,0:18:36.10:0,36,817	1/1:23,10:34:62.83:1829,63,0	1/1:10,8:20:8.52:304,9,0	1/1:15,0:15:21.07:470,21,0	1/1:16,0:15:15.02:293,15,0	1/1:19,0:18:11.51:182,12,0	0/0:19,0:22:51.17:0,51,1409	0/0:20,0:20:37.48:0,37,1056	1/1:16,0:16:6.02:179,6,0	1/1:6,3:12:6.02:199,6,0	1/1:16,1:24:45.12:1084,45,0	1/1:8,9:20:2.64:148,3,0	0/1:13,3:20:0.01:0,0,0	1/1:25,0:23:2.80:66,3,0	1/1:19,0:18:6.02:134,6,0	1/1:27,0:27:15.02:229,15,0	1/1:7,0:17:3.01:117,3,0	1/1:11,11:28:44.28:978,44,0	1/1:7,8:17:12.92:468,13,0	1/1:7,0:8:3.01:90,3,0
chr10	43922019	.	C	CACACACACAGAG	4819.69	PASS	AB=1.000;AC=28;AF=0.500;AN=56;BaseQRankSum=5.391;DP=652;FS=33.879;HRun=0;HaplotypeScore=227.6225;InbreedingCoeff=0.1897;MQ=51.69;MQ0=10;MQRankSum=0.191;QD=11.70;ReadPosRankSum=-2.196;VQSLOD=2.4210;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:31,0:31:48.46:48,0,391	1/1:0,0:13:3.05:88,3,0	0/0:33,0:19:48.89:0,49,676	0/0:39,0:18:24.76:0,25,436	0/1:18,0:18:66.31:66,0,305	0/0:26,0:26:75.26:0,75,2164	0/0:37,0:37:99:0,99,1812	0/1:25,0:24:43.19:43,0,246	0/0:17,0:17:51.17:0,51,1364	0/1:27,0:26:99:390,0,512	1/1:16,0:16:1.59:22,2,0	1/1:8,0:24:21.07:517,21,0	1/1:16,0:15:24.07:396,24,0	1/1:15,0:17:20.81:369,21,0	0/0:31,0:31:28.58:0,29,1317	0/0:18,0:19:37.62:0,38,1054	1/1:1,13:19:6.02:275,6,0	0/1:13,0:13:99:159,0,135	0/1:27,0:26:99:475,0,591	0/1:20,0:20:68.24:68,0,270	0/0:26,0:25:29.65:0,30,434	1/1:21,0:19:21.07:367,21,0	1/1:21,0:21:17.93:314,18,0	1/1:36,0:36:56.87:886,57,0	0/0:11,0:12:2.70:0,3,25	0/1:30,0:30:99:235,0,905	0/1:27,0:27:46.66:47,0,583	0/1:8,0:7:52.93:53,0,141
chr10	43922177	.	C	CT	23129.37	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-11.767;DP=682;FS=6.709;HRun=1;HaplotypeScore=68.4881;InbreedingCoeff=0.9978;MQ=86.38;MQ0=0;MQRankSum=-6.820;QD=43.64;ReadPosRankSum=3.022;VQSLOD=4.7759;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,60:60:99:2491,157,0	1/1:0,6:6:18.06:287,18,0	0/0:25,0:26:65.34:0,65,879	0/0:27,1:28:68.27:0,68,918	1/1:0,23:23:66.23:1054,66,0	0/0:41,0:41:99:0,114,1574	0/0:27,0:27:81.27:0,81,1130	1/1:1,44:45:99:2018,132,0	0/0:30,0:30:90.29:0,90,1243	1/1:0,24:24:69.24:1099,69,0	1/1:0,10:10:30.10:479,30,0	1/1:0,21:21:51.17:815,51,0	1/1:0,16:16:45.15:718,45,0	1/1:0,18:18:48.16:763,48,0	1/1:0,30:30:84.21:1342,84,0	1/1:0,23:23:69.24:1103,69,0	1/1:0,30:30:72.25:1151,72,0	1/1:0,13:13:39.13:623,39,0	1/1:1,13:14:42.14:671,42,0	1/1:1,19:20:45.15:719,45,0	1/1:2,36:38:99:1671,108,0	1/1:0,13:13:36.12:575,36,0	1/1:0,22:22:57.06:911,57,0	1/1:0,28:28:81.28:1294,81,0	1/1:0,11:11:33.11:527,33,0	1/1:0,27:27:75.26:1189,75,0	1/1:0,27:26:69.16:1102,69,0	1/1:0,11:11:33.11:527,33,0
chr10	43923065	.	C	CT	1215.23	PASS	AB=0.672;AC=16;AF=0.286;AN=56;BaseQRankSum=1.888;DP=497;FS=5.411;HRun=14;HaplotypeScore=74.5188;InbreedingCoeff=0.4382;MQ=62.87;MQ0=12;MQRankSum=-3.058;QD=7.32;ReadPosRankSum=-1.552;VQSLOD=2.4082;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:18:35.36:0,35,230	0/0:1,0:9:10.65:0,11,34	0/0:19,0:11:3.73:0,4,36	0/0:14,0:11:0.88:0,1,10	0/0:18,0:20:6.02:0,6,143	0/0:23,1:22:20.86:0,21,261	0/0:11,1:13:4.31:0,4,135	1/1:15,13:31:0.22:250,0,0	0/1:5,1:7:21.43:21,0,52	0/0:17,0:14:23.58:0,24,154	0/0:15,1:17:6.39:0,6,145	0/1:9,10:19:27.43:135,0,27	0/1:5,7:11:17.68:81,0,18	1/1:6,16:22:10.74:218,11,0	1/1:4,0:21:26.02:128,26,0	1/1:8,0:16:13.29:123,13,0	0/0:7,0:18:28.82:0,29,85	0/0:15,0:17:36.55:0,37,222	0/0:18,0:19:21.64:0,22,127	0/0:20,1:24:27.01:0,27,276	0/0:4,0:4:2.92:0,3,19	0/1:4,6:10:17.61:102,0,18	1/1:3,7:11:23.68:186,24,0	1/1:5,7:13:17.84:145,18,0	0/0:25,0:25:46.24:0,46,291	0/0:22,0:24:39.44:0,39,242	0/0:29,1:30:25.99:0,26,256	0/0:7,0:7:1.75:0,2,49
chr10	43923985	.	GGT	G	1519.11	PASS	AB=0.934;AC=35;AF=0.761;AN=46;BaseQRankSum=1.742;DP=631;FS=15.247;HRun=0;HaplotypeScore=99.3847;InbreedingCoeff=0.3491;MQ=56.65;MQ0=16;MQRankSum=-1.689;QD=3.76;ReadPosRankSum=3.641;VQSLOD=1.3881;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:32:8.76:46,9,0	1/1:6,0:8:5.68:28,6,0	./.	0/0:59,0:23:0:0,0,0	1/1:8,0:9:5.72:29,6,0	0/1:17,2:18:41.46:41,0,194	0/1:39,1:39:11.49:11,0,358	./.	0/1:22,2:24:20.80:21,0,119	1/1:10,0:17:13.07:88,13,0	./.	1/1:7,5:14:20.85:198,21,0	1/1:15,0:14:2.67:14,3,0	1/1:22,4:27:15.95:146,16,0	0/0:23,0:23:32.41:0,32,278	0/0:18,0:19:20.49:0,20,172	1/1:12,0:13:2.84:14,3,0	1/1:16,0:22:8.05:36,8,0	./.	1/1:8,0:14:14.24:70,14,0	1/1:38,0:37:2.70:19,3,0	1/1:10,6:18:20.72:192,21,0	1/1:3,5:8:9.02:99,9,0	1/1:33,15:50:47.79:488,48,0	1/1:7,0:16:5.81:38,6,0	0/0:13,0:12:2.97:0,3,20	1/1:11,0:17:14.39:81,14,0	./.
chr10	43928528	.	AC	A	1515.49	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.233;DP=697;FS=0.000;HRun=1;HaplotypeScore=102.6819;InbreedingCoeff=0.9988;MQ=88.35;MQ0=0;MQRankSum=-1.034;QD=36.08;ReadPosRankSum=1.289;VQSLOD=3.4974;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,147,2299	1/1:0,10:10:24.08:336,24,0	0/0:26,0:26:75.23:0,75,1156	0/0:23,0:23:55.37:0,55,914	0/0:11,0:11:33.11:0,33,528	0/0:19,0:19:57.16:0,57,861	0/0:21,0:21:60.20:0,60,959	0/0:41,0:41:99:0,120,1895	0/0:20,0:20:60.19:0,60,935	0/0:32,0:32:93.31:0,93,1465	0/0:17,0:17:51.16:0,51,793	0/0:31,0:31:93.32:0,93,1487	0/0:26,0:26:75.26:0,75,1199	0/0:33,0:33:93.30:0,93,1457	0/0:22,0:22:66.23:0,66,1055	0/0:23,0:23:69.24:0,69,1101	1/1:0,32:32:93.31:1301,93,0	0/0:19,0:19:57.19:0,57,911	0/0:16,0:16:48.14:0,48,743	0/0:18,0:18:54.18:0,54,860	0/0:40,0:40:99:0,120,1867	0/0:16,0:16:48.16:0,48,767	0/0:15,0:15:45.15:0,45,717	0/0:35,0:35:99:0,105,1645	0/0:23,0:23:69.24:0,69,1103	0/0:35,0:35:99:0,105,1655	0/0:22,0:21:66.22:0,66,1048	0/0:20,0:20:57.18:0,57,885
chr10	43929386	.	T	TCA	123.21	PASS	AB=0.940;AC=9;AF=0.214;AN=42;BaseQRankSum=-1.572;DP=611;FS=7.775;HRun=0;HaplotypeScore=85.3282;InbreedingCoeff=-0.1194;MQ=65.44;MQ0=21;MQRankSum=0.518;QD=0.58;ReadPosRankSum=-1.309;VQSLOD=0.8652;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:38:2.52:0,3,14	./.	./.	./.	./.	1/1:18,1:17:4.56:48,5,0	0/0:33,0:35:14.39:0,14,122	./.	0/0:24,0:25:2.80:0,3,174	0/1:14,0:13:0:0,0,0	0/0:10,0:9:2.99:0,3,23	0/0:22,0:22:3:0,3,31	0/0:18,0:22:8.56:0,9,59	0/1:16,3:22:34.62:35,0,37	0/1:19,0:17:15.92:16,0,54	0/1:21,0:22:8.09:35,0,8	0/0:17,0:20:13.58:0,14,63	0/1:28,3:30:20.72:80,0,21	./.	./.	0/1:39,0:37:6.40:6,0,54	0/0:19,0:19:2.70:0,3,30	0/0:8,0:8:3.01:0,3,31	0/1:37,6:46:13.58:14,0,235	0/0:18,0:17:5.75:0,6,56	0/0:18,0:17:2.15:0,2,24	0/0:6,0:6:3.01:0,3,31	0/0:8,0:6:3:0,3,31
chr10	43929759	.	AG	A	4062.21	PASS	AB=0.874;AC=48;AF=0.857;AN=56;BaseQRankSum=-1.641;DP=542;FS=0.000;HRun=11;HaplotypeScore=87.8606;InbreedingCoeff=0.0872;MQ=71.28;MQ0=9;MQRankSum=0.277;QD=7.98;ReadPosRankSum=7.540;VQSLOD=1.7819;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:12,14:26:43.90:348,44,0	1/1:7,1:8:8.90:63,9,0	0/0:31,1:20:12.34:0,12,115	0/1:39,0:28:32.88:33,0,120	0/1:6,6:14:13.37:124,0,13	0/1:10,0:10:22.38:22,0,55	0/1:21,4:25:52.64:53,0,128	0/1:12,1:14:15.80:16,0,41	1/1:8,3:12:28.98:225,29,0	1/1:7,8:15:24.40:197,24,0	1/1:5,2:7:11.98:97,12,0	1/1:11,0:20:16.07:47,16,0	1/1:8,0:12:15.02:42,15,0	1/1:9,0:28:34.12:97,34,0	1/1:15,7:22:4.50:134,4,0	1/1:10,9:19:13.25:267,13,0	1/1:12,13:24:48.94:372,49,0	1/1:9,10:19:34.96:273,35,0	0/1:16,5:21:4.01:268,0,4	1/1:5,2:7:8.98:72,9,0	1/1:25,17:44:63.88:509,64,0	1/1:10,0:18:17.66:51,18,0	1/1:5,0:11:6.10:18,6,0	1/1:8,0:34:50.93:146,51,0	1/1:10,5:15:9.67:87,10,0	1/1:7,6:13:20.96:169,21,0	1/1:7,4:11:23.69:184,24,0	1/1:7,4:11:17.91:147,18,0
chr10	43932029	.	G	GA	2211.82	PASS	AB=0.955;AC=26;AF=0.464;AN=56;BaseQRankSum=7.015;DP=505;FS=6.557;HRun=13;HaplotypeScore=68.4725;InbreedingCoeff=0.6388;MQ=70.81;MQ0=8;MQRankSum=-1.105;QD=7.45;ReadPosRankSum=0.346;VQSLOD=2.4098;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,3:23:20.81:0,21,271	1/1:3,2:6:14.78:115,15,0	0/1:40,0:15:10.68:11,0,64	0/1:40,0:20:11.04:11,0,31	0/0:15,0:15:2.44:0,2,140	0/0:13,0:13:25.87:0,26,183	0/1:16,2:20:6.98:7,0,234	1/1:13,1:21:24.71:135,25,0	0/0:10,1:11:0.20:0,0,127	0/1:8,1:10:14:14,0,53	0/0:7,0:8:16.85:0,17,108	1/1:17,0:16:31.91:188,32,0	1/1:13,0:13:26.02:147,26,0	1/1:18,0:18:43.16:233,43,0	1/1:6,8:16:21.06:303,21,0	1/1:6,8:16:29.70:248,30,0	1/1:12,12:24:12.59:380,13,0	0/0:27,1:31:27.82:0,28,451	0/0:20,0:20:38.18:0,38,253	0/0:12,0:14:31.76:0,32,211	0/0:7,0:7:10.95:0,11,68	1/1:21,0:21:45.71:235,46,0	1/1:16,0:16:39.89:201,40,0	1/1:17,0:17:37.26:192,37,0	0/0:8,0:9:19.82:0,20,129	0/0:23,0:25:55:0,55,371	0/0:26,0:26:46.49:0,46,314	0/0:5,0:4:2.92:0,3,20
chr10	43932038	.	A	AC	3078.10	PASS	AB=1.000;AC=14;AF=0.250;AN=56;BaseQRankSum=-3.270;DP=493;FS=8.987;HRun=0;HaplotypeScore=59.8679;InbreedingCoeff=0.7601;MQ=67.60;MQ0=10;MQRankSum=-0.565;QD=23.68;ReadPosRankSum=2.396;VQSLOD=4.5855;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:59.68:0,60,724	0/0:5,0:5:5.04:0,5,31	0/0:38,0:11:23.96:0,24,213	0/0:50,0:22:13:0,13,189	0/0:15,0:15:40.33:0,40,469	0/0:14,0:14:42:0,42,490	0/0:19,0:19:50.29:0,50,637	0/0:16,0:16:26.02:0,26,173	0/0:10,0:10:25.94:0,26,289	0/0:11,0:10:27.50:0,28,291	0/0:8,0:8:24.03:0,24,285	1/1:2,11:12:36.10:447,36,0	1/1:1,11:12:32.98:386,33,0	1/1:2,14:16:48.14:605,48,0	0/1:16,0:16:8.53:9,0,97	0/0:12,0:12:3.28:0,3,45	0/1:22,0:22:12.51:13,0,111	0/0:32,0:32:85.83:0,86,1105	0/0:20,0:19:48.08:0,48,592	0/0:16,0:16:48.02:0,48,556	0/0:6,0:5:15.01:0,15,173	1/1:2,16:18:54.14:666,54,0	1/1:2,13:15:45.13:567,45,0	1/1:7,11:18:48.09:575,48,0	0/0:12,0:12:36.05:0,36,409	0/0:24,0:24:72.17:0,72,904	0/0:26,0:26:78.03:0,78,884	0/0:4,0:3:9.01:0,9,93
chr10	43932089	.	CA	C	2745.03	PASS	AC=22;AF=0.407;AN=54;BaseQRankSum=6.127;DP=469;FS=1.064;HRun=9;HaplotypeScore=63.1100;InbreedingCoeff=0.9711;MQ=68.27;MQ0=12;MQRankSum=-0.778;QD=21.12;ReadPosRankSum=-0.249;VQSLOD=4.0335;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:57.16:0,57,649	1/1:1,3:4:9:82,9,0	0/0:59,0:13:6.43:0,6,178	0/0:65,1:25:18.16:0,18,143	0/0:12,0:12:33.06:0,33,364	0/0:10,0:11:29.92:0,30,326	0/0:18,0:18:42.12:0,42,484	1/1:3,19:22:53.33:456,53,0	0/0:8,0:8:21.06:0,21,242	0/0:12,0:11:33.10:0,33,378	./.	1/1:3,8:11:24:219,24,0	1/1:2,4:6:17.99:159,18,0	1/1:1,8:9:27.01:243,27,0	1/1:0,13:13:39.02:357,39,0	1/1:1,9:10:27.01:247,27,0	1/1:1,20:21:57.03:521,57,0	0/0:18,0:18:45.09:0,45,494	0/0:18,0:16:48.09:0,48,531	0/0:23,0:23:56.58:0,57,592	0/0:12,0:12:30.09:0,30,346	1/1:2,9:11:26.57:222,27,0	1/1:3,9:12:30:270,30,0	1/1:4,7:11:20.99:187,21,0	0/0:9,0:9:24.03:0,24,262	0/0:20,0:19:47.93:0,48,529	0/0:17,0:17:42.12:0,42,483	0/0:7,0:7:18.01:0,18,185
chr10	43932166	.	ACCG	A	3004.37	PASS	AB=0.706;AC=47;AF=0.940;AN=50;BaseQRankSum=-2.467;DP=119;FS=14.564;HRun=0;HaplotypeScore=23.0952;InbreedingCoeff=0.1301;MQ=84.31;MQ0=1;MQRankSum=-3.150;QD=28.34;ReadPosRankSum=-1.227;VQSLOD=1.5920;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,9:10:3.01:52,3,0	./.	0/1:7,5:7:52.57:233,0,53	0/0:4,0:3:8.89:0,9,96	1/1:2,1:3:3.01:51,3,0	./.	1/1:0,5:5:6.02:102,6,0	1/1:0,4:4:6.02:105,6,0	1/1:3,0:3:9.02:123,9,0	1/1:0,3:3:9.03:157,9,0	1/1:1,2:3:3.01:51,3,0	1/1:3,1:4:12.01:152,12,0	1/1:0,1:1:3.01:46,3,0	1/1:1,2:3:3.01:52,3,0	1/1:0,4:4:12.04:207,12,0	1/1:0,1:1:3.01:52,3,0	1/1:3,2:5:12.02:180,12,0	1/1:2,0:2:6.02:93,6,0	1/1:2,3:4:9.03:143,9,0	1/1:0,4:4:12.04:207,12,0	./.	1/1:1,3:4:9.03:139,9,0	1/1:3,2:5:12.03:170,12,0	1/1:2,2:4:6.02:103,6,0	1/1:0,2:2:6.02:76,6,0	1/1:5,6:11:24.07:373,24,0	1/1:0,5:5:12.04:193,12,0	1/1:0,3:3:3.01:52,3,0
chr10	43932208	.	TCA	T	2605.84	PASS	AB=0.750;AC=45;AF=0.900;AN=50;BaseQRankSum=-0.747;DP=145;FS=11.409;HRun=0;HaplotypeScore=32.9427;InbreedingCoeff=0.2310;MQ=80.87;MQ0=2;MQRankSum=-3.332;QD=21.54;ReadPosRankSum=2.664;VQSLOD=2.6855;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,10:10:5.90:73,6,0	./.	0/0:9,0:6:3.22:0,3,145	0/1:2,0:3:4.22:22,0,4	1/1:0,5:5:15.05:184,15,0	1/1:1,0:6:9.50:103,9,0	1/1:2,0:2:6:55,6,0	1/1:0,12:12:33.10:439,33,0	1/1:0,0:3:6.02:68,6,0	1/1:2,0:2:3.01:42,3,0	1/1:0,4:4:9.03:109,9,0	1/1:0,5:5:9.03:109,9,0	1/1:1,0:1:3.01:45,3,0	1/1:3,0:3:9:104,9,0	./.	1/1:0,2:2:3.01:36,3,0	1/1:1,4:4:3.01:36,3,0	1/1:0,4:4:3.01:38,3,0	1/1:1,6:7:18.03:224,18,0	1/1:0,7:7:17.95:184,18,0	./.	1/1:2,0:2:6.02:75,6,0	1/1:0,6:6:8.94:89,9,0	0/0:2,6:7:3.01:0,3,35	1/1:0,9:9:9.03:109,9,0	1/1:0,11:11:33.02:418,33,0	1/1:0,10:10:9.03:110,9,0	1/1:1,1:1:3.01:40,3,0
chr10	43934441	.	C	CTTCT	2194.26	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-6.976;DP=508;FS=1.377;HRun=0;HaplotypeScore=99.8140;InbreedingCoeff=0.9956;MQ=67.06;MQ0=0;MQRankSum=-1.482;QD=45.71;ReadPosRankSum=-1.637;VQSLOD=3.4103;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,105,1887	1/1:2,7:9:18.06:471,18,0	0/0:20,0:16:30.68:0,31,634	0/0:20,0:19:45.15:0,45,776	0/0:18,0:18:45.14:0,45,788	0/0:23,0:23:57.20:0,57,1036	0/0:19,0:19:39.13:0,39,688	1/1:7,14:23:48.08:973,48,0	0/0:16,0:16:39.13:0,39,709	0/0:14,0:14:42.14:0,42,764	0/0:19,0:19:57.20:0,57,1036	0/0:16,0:16:33.10:0,33,597	0/0:12,0:12:33.11:0,33,580	0/0:24,0:24:57.18:0,57,1013	0/0:13,0:13:39.13:0,39,683	0/0:16,0:16:42.14:0,42,733	1/1:2,14:16:38.46:892,38,0	0/0:20,0:20:51.14:0,51,875	0/0:22,0:22:51.15:0,51,846	0/0:15,0:15:39.13:0,39,708	0/0:24,0:24:57.17:0,57,987	0/0:15,0:15:39.13:0,39,657	0/0:14,0:14:39.13:0,39,709	0/0:24,0:24:63.20:0,63,1093	0/0:12,0:12:30.10:0,30,525	0/0:13,0:13:36.12:0,36,655	0/0:21,0:21:60.20:0,60,1068	0/0:10,0:10:24.02:0,24,361
chr10	43934489	.	GGAGAGA	G	1488.89	PASS	AB=0.875;AC=26;AF=0.542;AN=48;BaseQRankSum=3.704;DP=439;FS=4.323;HRun=0;HaplotypeScore=114.2956;InbreedingCoeff=0.5346;MQ=54.50;MQ0=12;MQRankSum=-4.263;QD=7.26;ReadPosRankSum=0.437;VQSLOD=2.3066;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:22,4:26:9.03:153,9,0	0/0:5,0:5:6.02:0,6,152	0/0:24,0:10:0:0,0,0	0/0:37,0:12:0.94:0,1,2	0/0:16,0:19:5.08:0,5,57	0/0:22,0:23:15.05:0,15,396	0/0:5,0:10:9.03:0,9,264	0/0:18,0:15:7.24:0,7,92	1/1:11,0:17:3.13:6,3,0	./.	1/1:8,0:12:6.02:79,6,0	1/1:7,1:9:6.02:103,6,0	1/1:14,5:19:12:244,12,0	1/1:8,3:11:6.02:122,6,0	0/0:15,0:15:9.03:0,9,288	0/0:18,0:21:38.26:0,38,1037	0/0:11,0:14:21.07:0,21,523	0/1:12,0:12:9.41:9,0,65	1/1:13,5:16:12.02:208,12,0	./.	1/1:8,2:10:3.01:61,3,0	0/1:10,4:15:32.17:131,0,32	./.	1/1:11,6:16:3.01:61,3,0	1/1:8,3:12:9.03:164,9,0	./.	1/1:16,1:19:9.03:145,9,0	1/1:5,2:7:9.03:164,9,0
chr10	43935462	.	G	GTCTCTGTC	293.78	PASS	AB=1.000;AC=5;AF=0.093;AN=54;BaseQRankSum=0.587;DP=790;FS=0.000;HRun=0;HaplotypeScore=190.1073;InbreedingCoeff=0.7298;MQ=56.48;MQ0=25;MQRankSum=-2.489;QD=3.87;ReadPosRankSum=-1.276;VQSLOD=2.3039;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:35:77.89:0,78,1453	1/1:3,9:15:2.32:120,2,0	./.	0/1:35,0:11:3.62:4,0,6	0/0:20,0:19:39.10:0,39,736	0/0:30,0:30:69.10:0,69,1157	0/0:24,0:24:51.11:0,51,823	0/0:46,0:44:77.95:0,78,980	0/0:38,0:38:81.23:0,81,1514	0/0:27,0:27:51.15:0,51,919	0/0:31,0:31:78.19:0,78,1379	0/0:27,0:25:36.08:0,36,670	0/0:23,0:20:27.32:0,27,562	0/0:24,0:25:30.09:0,30,637	0/0:26,0:26:54.12:0,54,1000	0/0:26,0:26:53.08:0,53,970	1/1:9,16:26:9.03:272,9,0	0/0:20,0:20:57.11:0,57,1024	0/0:23,0:22:51.42:0,51,796	0/0:25,0:25:51.16:0,51,1098	0/0:54,0:54:99:0,123,2256	0/0:23,0:23:24.08:0,24,579	0/0:22,0:21:18.03:0,18,356	0/0:23,0:23:27.08:0,27,574	0/0:31,0:31:66.18:0,66,1225	0/0:39,0:38:81.20:0,81,1442	0/0:28,0:27:66.18:0,66,1456	0/0:26,0:26:54.15:0,54,1151
chr10	43935496	.	G	GTC	870.74	PASS	AB=0.920;AC=14;AF=0.250;AN=56;BaseQRankSum=9.119;DP=918;FS=37.951;HRun=0;HaplotypeScore=131.2297;InbreedingCoeff=0.1892;MQ=60.59;MQ0=37;MQRankSum=-2.395;QD=2.05;ReadPosRankSum=-2.709;VQSLOD=0.0209;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:40:99:0,106,1355	0/0:13,0:13:6.47:0,6,78	0/1:92,0:18:8.58:9,0,74	0/1:109,0:40:1.77:2,0,344	0/0:26,0:26:60.55:0,61,764	0/0:30,0:30:66.19:0,66,815	0/0:29,0:29:69.22:0,69,881	0/1:48,0:44:21.39:21,0,158	0/0:37,0:37:99:0,99,1229	0/0:22,0:22:57.18:0,57,731	0/0:35,0:35:96.27:0,96,1208	1/1:27,0:25:1.87:26,2,0	0/1:22,0:19:25.12:104,0,25	1/1:19,0:18:2.16:25,2,0	0/1:11,11:22:34.74:248,0,35	0/1:14,11:25:24.07:497,0,24	0/0:28,0:28:25.03:0,25,338	0/0:19,0:19:53.99:0,54,647	0/0:28,0:28:69.19:0,69,850	0/0:25,0:25:60.01:0,60,729	0/0:53,0:53:99:0,108,1381	1/1:24,0:24:5.99:50,6,0	0/1:16,0:15:0:0,0,0	0/1:20,0:20:34.39:34,0,76	0/0:32,0:32:84.26:0,84,1055	0/0:32,0:31:81.20:0,81,988	0/0:27,0:26:48.15:0,48,609	0/0:17,0:17:39.12:0,39,499
chr10	43936764	.	GGA	G	396.12	PASS	AB=0.920;AC=13;AF=0.295;AN=44;BaseQRankSum=-1.871;DP=523;FS=16.141;HRun=0;HaplotypeScore=97.6519;InbreedingCoeff=-0.0033;MQ=73.11;MQ0=7;MQRankSum=2.918;QD=1.87;ReadPosRankSum=0.702;VQSLOD=1.0158;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:4.09:0,4,28	./.	./.	./.	0/1:18,1:19:17.90:27,0,18	0/1:18,3:21:6.72:58,0,7	1/1:19,3:24:20.48:172,20,0	0/0:26,0:26:11.62:0,12,69	1/1:15,1:17:11.43:83,11,0	0/1:22,0:22:12.27:12,0,55	./.	0/1:22,1:24:1.43:1,0,233	0/1:12,0:12:2.71:3,0,68	0/1:13,1:15:3.51:4,0,138	0/0:19,0:21:7.62:0,8,46	0/0:19,0:18:8.17:0,8,91	0/1:18,4:22:38.13:112,0,38	0/0:18,0:19:2.82:0,3,129	0/0:20,0:19:10.20:0,10,63	./.	0/0:15,0:14:8.75:0,9,80	0/1:15,2:17:33.27:33,0,38	0/1:17,2:19:23.59:24,0,52	0/0:18,0:18:17.85:0,18,128	./.	0/0:8,0:8:1.82:0,2,5	0/0:17,0:17:6.39:0,6,50	0/0:15,0:13:6.04:0,6,22
chr10	43936803	.	GAGAGACAGAGAC	G	4272.01	PASS	AB=1.000;AC=34;AF=0.680;AN=50;BaseQRankSum=-7.759;DP=492;FS=6.383;HRun=0;HaplotypeScore=191.0664;InbreedingCoeff=-0.1145;MQ=47.17;MQ0=25;MQRankSum=-1.918;QD=9.58;ReadPosRankSum=-1.861;VQSLOD=3.1690;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:23:37.80:521,38,0	./.	./.	./.	0/0:19,0:18:3.46:0,3,26	0/1:24,0:24:7.28:7,0,270	0/1:22,0:21:24.10:24,0,147	1/1:23,0:22:37.34:224,37,0	0/1:16,0:14:8.59:9,0,206	0/1:25,0:25:11.65:491,0,12	1/1:11,0:11:9.03:150,9,0	0/1:22,0:22:43.17:43,0,82	0/1:12,0:13:26.21:29,0,26	0/1:24,0:24:15.31:15,0,55	1/1:17,0:16:10.72:64,11,0	0/1:16,0:13:50.55:51,0,112	0/1:19,0:21:55.39:101,0,55	0/1:20,0:18:37.96:324,0,38	1/1:3,12:13:33.40:366,33,0	1/1:17,0:17:6.32:52,6,0	1/1:21,0:19:27.04:377,27,0	0/1:24,0:24:5.31:5,0,33	0/0:20,0:20:6.62:0,7,40	0/1:18,0:18:14.06:21,0,14	1/1:14,0:11:12.01:198,12,0	1/1:19,0:18:42.47:529,42,0	1/1:19,0:19:34.39:401,34,0	1/1:18,0:15:23.19:269,23,0
chr10	43936805	.	GAGACAGAGAC	G	4665.48	PASS	AB=0.995;AC=35;AF=0.700;AN=50;BaseQRankSum=-8.349;DP=489;FS=9.222;HRun=0;HaplotypeScore=176.1057;InbreedingCoeff=-0.0783;MQ=47.58;MQ0=24;MQRankSum=-1.163;QD=10.44;ReadPosRankSum=-1.830;VQSLOD=2.9699;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:22:39.75:588,40,0	./.	./.	./.	0/0:6,13:18:3.35:0,3,18	0/1:24,0:24:17.03:17,0,253	0/1:23,0:22:22.64:23,0,120	1/1:22,0:21:29.44:182,29,0	0/1:16,0:14:27.62:28,0,150	1/1:25,0:25:36.39:695,36,0	1/1:12,0:12:12.04:200,12,0	0/1:23,0:23:13.09:13,0,261	0/1:13,0:13:52.86:53,0,63	0/1:24,0:24:10.96:11,0,143	1/1:8,0:17:10.92:119,11,0	0/1:16,1:14:61.92:62,0,71	0/1:18,0:18:26.42:109,0,26	0/1:21,0:19:65.93:359,0,66	1/1:15,0:13:32.42:341,32,0	1/1:3,15:18:6.38:52,6,0	1/1:21,0:19:9.79:357,10,0	0/1:23,0:23:7.11:7,0,25	0/0:19,0:19:9.48:0,9,85	0/1:18,0:18:10.83:11,0,102	1/1:14,0:11:12.04:198,12,0	1/1:19,0:18:42.88:530,43,0	1/1:20,0:20:36.15:409,36,0	1/1:16,0:13:28.28:303,28,0
chr10	43936807	.	GACAGAGAC	G	4926.29	PASS	AB=0.986;AC=35;AF=0.700;AN=50;BaseQRankSum=-7.581;DP=490;FS=5.604;HRun=0;HaplotypeScore=162.5483;InbreedingCoeff=-0.1014;MQ=47.79;MQ0=24;MQRankSum=0.687;QD=10.95;ReadPosRankSum=-1.302;VQSLOD=3.1072;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:21:38.16:578,38,0	./.	./.	./.	0/0:18,0:17:2.85:0,3,18	0/1:25,0:25:9.38:9,0,174	0/1:25,0:24:71.75:72,0,95	1/1:22,0:20:15.49:158,15,0	0/1:16,0:15:51.05:51,0,102	1/1:24,0:25:41.42:754,41,0	1/1:13,0:13:12.04:200,12,0	0/1:23,0:23:15.39:15,0,326	0/1:13,0:13:36.59:37,0,93	0/1:25,0:25:10.81:11,0,130	1/1:18,0:17:10.72:56,11,0	0/1:17,0:14:20.52:24,0,21	0/1:17,0:17:59.29:107,0,59	0/1:19,0:18:55.54:371,0,56	1/1:15,0:13:32.89:380,33,0	1/1:18,0:18:5.72:51,6,0	1/1:23,0:21:18.09:459,18,0	0/1:21,0:21:3.81:4,0,29	0/0:19,0:19:1.54:0,2,77	0/1:17,0:18:16.70:17,0,140	1/1:15,0:12:15.05:248,15,0	1/1:3,15:17:42.95:549,43,0	1/1:21,0:21:34.68:469,35,0	1/1:15,0:13:27.20:307,27,0
chr10	43936815	.	CAGAGAG	C	2805.08	PASS	AB=0.960;AC=27;AF=0.500;AN=54;BaseQRankSum=-4.721;DP=498;FS=11.979;HRun=0;HaplotypeScore=155.6204;InbreedingCoeff=0.1917;MQ=48.34;MQ0=24;MQRankSum=1.581;QD=7.69;ReadPosRankSum=4.444;VQSLOD=1.9227;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:26:17.09:0,17,144	0/0:4,0:4:3:0,3,25	0/0:2,0:1:3:0,3,26	./.	0/1:15,0:15:0.04:0,0,0	0/1:27,0:27:67.85:68,0,94	0/1:29,0:28:72.01:92,0,72	0/1:24,0:21:92.24:92,0,120	0/1:18,0:16:14.80:15,0,48	0/1:24,0:24:19.76:20,0,48	0/0:16,0:16:11.98:0,12,100	1/1:19,1:20:43.49:478,43,0	1/1:11,0:11:8.57:233,9,0	1/1:21,1:22:48.41:686,48,0	1/1:18,0:17:14.53:100,15,0	1/1:18,0:15:26.22:416,26,0	0/1:14,0:14:6.25:6,0,28	0/1:20,0:18:33.35:33,0,89	0/1:16,0:13:13.56:14,0,33	0/0:17,0:17:2.59:0,3,16	0/0:22,0:20:11.93:0,12,91	0/1:4,16:20:1.24:32,0,1	1/1:7,13:20:14.94:142,15,0	1/1:18,0:18:42.37:496,42,0	0/1:14,0:11:0.07:0,0,0	1/1:17,0:16:10.19:49,10,0	0/0:25,0:26:16.39:0,16,115	0/0:15,0:14:0.99:0,1,70
chr10	43937377	.	TCA	T	1777.35	PASS	AB=0.911;AC=37;AF=0.740;AN=50;BaseQRankSum=5.294;DP=636;FS=7.305;HRun=0;HaplotypeScore=89.7873;InbreedingCoeff=0.3406;MQ=56.48;MQ0=9;MQRankSum=1.048;QD=3.95;ReadPosRankSum=0.819;VQSLOD=1.6760;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:36,12:47:46.93:83,0,47	1/1:1,0:3:2.84:14,3,0	./.	./.	1/1:6,1:6:3.01:33,3,0	0/1:22,0:22:17.16:17,0,122	0/1:30,3:32:0.91:1,0,504	0/0:27,0:27:2.97:0,3,20	0/0:23,0:25:36.08:0,36,484	1/1:5,3:8:9.02:97,9,0	1/1:1,2:4:5.85:46,6,0	1/1:16,0:29:19.88:98,20,0	1/1:17,0:23:16.73:83,17,0	1/1:19,0:25:21.91:102,22,0	0/0:14,0:22:4.40:0,4,30	0/0:14,0:24:12.47:0,12,120	1/1:15,1:23:24.16:131,24,0	1/1:17,6:21:15.04:163,15,0	1/1:14,0:14:5.80:45,6,0	1/1:8,0:8:5.23:36,5,0	0/1:42,10:51:11.72:57,0,12	1/1:12,0:12:2.74:14,3,0	0/1:5,0:5:8.73:9,0,15	1/1:31,0:50:51.38:269,51,0	1/1:6,1:7:12.03:129,12,0	1/1:20,9:30:26.02:263,26,0	1/1:13,9:23:24.37:242,24,0	./.
chr10	43940293	.	AGTGT	A	167.48	PASS	AB=0.974;AC=17;AF=0.386;AN=44;BaseQRankSum=2.300;DP=285;FS=0.000;HRun=0;HaplotypeScore=49.6574;InbreedingCoeff=0.3624;MQ=74.40;MQ0=9;MQRankSum=-0.275;QD=1.93;ReadPosRankSum=0.584;VQSLOD=0.9818;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:13,3:16:2.90:0,3,16	1/1:3,0:4:3:28,3,0	./.	0/0:24,0:17:0.47:0,0,1	1/1:8,3:11:3.01:36,3,0	0/0:11,0:11:9.03:0,9,203	0/0:11,0:11:21.05:0,21,418	0/0:25,0:24:6.02:0,6,78	0/0:6,0:5:2.99:0,3,24	1/1:5,0:5:3.01:44,3,0	./.	./.	./.	0/0:7,0:8:9.01:0,9,147	0/1:11,0:11:0:0,0,0	1/1:7,0:8:3:28,3,0	1/1:12,0:13:3:28,3,0	0/0:8,0:8:2.97:0,3,20	./.	./.	0/1:11,1:11:34.43:34,0,77	0/0:5,0:5:3.01:0,3,63	0/0:6,0:6:3.01:0,3,69	0/0:12,0:12:12.04:0,12,273	1/1:11,2:14:3.23:70,3,0	1/1:3,2:5:2.99:23,3,0	0/0:6,0:6:2.98:0,3,22	0/1:3,0:3:0:0,0,0
chr10	43940348	.	TG	T	402.91	PASS	AC=4;AF=0.077;AN=52;BaseQRankSum=1.068;DP=236;FS=6.255;HRun=7;HaplotypeScore=35.1687;InbreedingCoeff=0.4839;MQ=85.46;MQ0=24;MQRankSum=-1.543;QD=19.19;ReadPosRankSum=3.699;VQSLOD=2.6744;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:5:12.04:0,12,149	1/1:0,10:10:24.05:243,24,0	0/0:58,1:16:26.57:0,27,273	0/0:70,0:16:27.06:0,27,258	./.	0/0:5,0:5:6.02:0,6,75	0/0:6,0:6:12.04:0,12,149	0/0:4,0:4:12.04:0,12,150	0/0:1,0:1:0:0,0,0	0/0:4,0:4:6.02:0,6,75	0/0:3,0:3:9.03:0,9,103	0/0:4,0:3:6.01:0,6,63	0/0:1,0:1:3.01:0,3,37	0/0:4,0:4:12.02:0,12,128	0/0:2,0:2:3.01:0,3,38	0/0:2,0:2:3:0,3,35	1/1:2,9:11:27.06:275,27,0	./.	0/0:4,0:4:6.02:0,6,75	0/0:6,0:6:12.03:0,12,137	0/0:5,0:5:9.03:0,9,113	0/0:3,0:3:9.03:0,9,113	0/0:2,0:2:5.93:0,6,55	0/0:4,0:4:6.02:0,6,75	0/0:4,0:4:6.02:0,6,75	0/0:11,0:11:27.08:0,27,328	0/0:2,0:2:6.02:0,6,75	0/0:1,0:1:0:0,0,0
chr10	43941401	.	G	GA	8181.46	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-13.892;DP=683;FS=2.203;HRun=7;HaplotypeScore=69.2106;InbreedingCoeff=0.9905;MQ=78.46;MQ0=0;MQRankSum=-1.156;QD=28.02;ReadPosRankSum=4.533;VQSLOD=5.4456;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,47:52:99:1449,120,0	0/0:14,0:14:33.04:0,33,313	0/0:24,0:24:25.40:0,25,349	0/0:25,0:24:28.23:0,28,353	1/1:3,18:21:51.09:592,51,0	0/0:12,0:12:36.04:0,36,341	0/0:22,0:22:57.05:0,57,538	0/0:28,0:28:60.02:0,60,560	0/0:36,0:36:99:0,99,956	1/1:5,27:32:81.25:977,81,0	1/1:1,9:10:27.04:310,27,0	0/0:34,0:34:90.12:0,90,863	0/0:23,0:23:66.07:0,66,622	0/0:22,0:22:27.56:0,28,491	0/0:30,0:30:87.12:0,87,829	0/0:22,0:22:54.04:0,54,505	0/0:36,0:36:93.14:0,93,898	1/1:2,18:20:48.15:580,48,0	1/1:4,10:14:30.09:362,30,0	1/1:3,14:17:45.04:498,45,0	1/1:8,32:41:81.25:979,81,0	0/0:11,0:11:30.02:0,30,282	0/0:14,0:14:39.05:0,39,371	0/0:38,0:38:99:0,102,985	1/1:1,20:21:57.17:688,57,0	1/1:3,33:36:99:1180,102,0	1/1:4,17:21:10.15:406,10,0	1/1:0,6:7:14.91:160,15,0
chr10	43941425	.	CA	C	1205.54	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=1.851;DP=675;FS=2.894;HRun=5;HaplotypeScore=86.9300;InbreedingCoeff=0.9917;MQ=76.15;MQ0=0;MQRankSum=-1.617;QD=25.65;ReadPosRankSum=2.269;VQSLOD=3.3013;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,141,1866	1/1:0,13:13:36.10:408,36,0	0/0:19,0:20:15.92:0,16,542	0/0:21,0:19:47.81:0,48,593	0/0:22,0:22:63.21:0,63,860	0/0:8,0:8:24.08:0,24,323	0/0:22,0:22:63.21:0,63,862	0/0:27,0:27:81.26:0,81,1094	0/0:34,0:34:96.31:0,96,1297	0/0:34,0:34:96.31:0,96,1298	0/0:11,0:11:33.11:0,33,451	0/0:35,0:35:99:0,99,1340	0/0:23,0:23:66.19:0,66,871	0/0:16,0:16:48.15:0,48,635	0/0:30,0:30:78.24:0,78,1032	0/0:17,0:17:48.16:0,48,657	1/1:1,33:34:81.23:919,81,0	0/0:17,0:17:42.10:0,42,553	0/0:12,0:12:30.10:0,30,410	0/0:20,0:20:60.12:0,60,765	0/0:38,0:38:93.31:0,93,1267	0/0:13,0:13:39.13:0,39,534	0/0:20,0:20:60.19:0,60,804	0/0:32,0:32:90.29:0,90,1214	0/0:25,0:25:75.21:0,75,990	0/0:41,0:41:99:0,120,1621	0/0:24,0:24:60.20:0,60,820	0/0:12,0:12:36.12:0,36,492
chr10	43943084	.	TTTTCTTTCTTTCTTTC	T	5505.34	PASS	AB=0.532;AC=23;AF=0.411;AN=56;BaseQRankSum=4.975;DP=452;FS=19.317;HRun=0;HaplotypeScore=158.0195;InbreedingCoeff=0.8211;MQ=60.81;MQ0=8;MQRankSum=-1.110;QD=28.53;ReadPosRankSum=-2.087;VQSLOD=2.6767;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:21,2:22:42.53:897,43,0	0/0:3,0:3:9.03:0,9,346	0/0:19,0:10:5.10:0,5,85	0/0:18,0:10:8.37:0,8,60	1/1:12,0:12:15.01:217,15,0	0/0:13,0:13:33.11:0,33,2032	0/0:13,0:13:33.07:0,33,1206	0/0:34,0:33:60.14:0,60,1298	0/0:13,0:12:27.09:0,27,1578	1/1:4,8:12:20.80:381,21,0	1/1:0,18:18:29.87:432,30,0	0/0:14,0:15:9.03:0,9,515	0/0:24,0:24:30.09:0,30,1535	0/0:22,0:21:48.12:0,48,2624	0/0:20,0:20:6.02:0,6,128	0/0:12,0:12:30.05:0,30,622	0/0:15,0:16:36.55:0,37,707	0/1:3,22:25:16.02:297,0,16	1/1:5,10:15:33.09:624,33,0	1/1:1,9:9:15.05:342,15,0	1/1:12,0:12:24.07:449,24,0	0/0:11,0:11:27.08:0,27,1412	0/0:10,0:10:24.08:0,24,1046	0/0:15,0:15:27.01:0,27,1429	1/1:2,19:21:6.02:266,6,0	1/1:3,13:16:42.14:1087,42,0	1/1:8,18:26:12.93:473,13,0	1/1:3,0:3:3.01:40,3,0
chr10	43943085	.	T	TC	468.46	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=2.649;DP=448;FS=8.223;HRun=0;HaplotypeScore=81.0627;InbreedingCoeff=0.7907;MQ=60.56;MQ0=9;MQRankSum=-1.491;QD=23.42;ReadPosRankSum=0.111;VQSLOD=4.3324;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:22:49.58:0,50,570	1/1:3,0:3:7.83:75,8,0	0/0:19,0:10:26.98:0,27,336	0/0:18,0:9:22:0,22,292	0/0:11,0:11:18.06:0,18,251	0/0:12,0:12:36.10:0,36,471	0/0:13,0:13:39.08:0,39,506	0/0:33,0:32:69.07:0,69,957	0/0:13,0:12:30.07:0,30,394	0/0:11,0:11:25.06:0,25,307	0/0:18,0:18:27:0,27,349	0/0:16,0:16:12.03:0,12,145	0/0:24,0:24:36.04:0,36,459	0/0:22,0:21:63.21:0,63,879	0/0:21,0:21:11.06:0,11,116	0/0:13,0:13:27.07:0,27,445	1/1:7,10:16:27.34:506,27,0	0/0:24,0:24:8.96:0,9,113	0/0:15,0:15:26.97:0,27,324	0/0:10,0:9:11.93:0,12,142	0/0:12,0:12:35.93:0,36,431	0/0:10,0:10:30.10:0,30,419	0/0:10,0:10:29.96:0,30,384	0/0:14,0:14:26.30:0,26,342	0/0:21,0:21:11.88:0,12,119	0/0:16,0:16:44.67:0,45,540	0/0:26,0:26:27.22:0,27,302	0/0:3,0:3:3.01:0,3,42
chr10	43943091	.	TC	T	418.82	PASS	AB=0.967;AC=8;AF=0.143;AN=56;BaseQRankSum=7.351;DP=441;FS=7.695;HRun=1;HaplotypeScore=76.8787;InbreedingCoeff=0.0523;MQ=60.22;MQ0=11;MQRankSum=-5.562;QD=3.95;ReadPosRankSum=0.403;VQSLOD=-0.0315;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:21:4.43:0,4,393	1/1:0,3:3:9.03:120,9,0	0/0:19,0:9:23.18:0,23,284	0/0:19,0:9:17.18:0,17,216	0/0:10,0:10:15.05:0,15,207	0/0:12,0:12:36.12:0,36,547	0/0:13,0:13:39.10:0,39,555	0/0:34,0:33:44.24:0,44,790	0/0:12,0:11:27.09:0,27,404	0/0:9,0:9:17.99:0,18,240	0/0:18,0:18:17.72:0,18,287	0/0:16,0:16:15.05:0,15,202	0/0:25,0:25:39.05:0,39,530	0/0:21,0:20:60.20:0,60,897	0/0:21,0:21:8.06:0,8,94	0/1:13,1:14:22.80:23,0,290	0/1:15,1:15:29.13:343,0,29	0/1:23,0:23:29.04:29,0,34	0/0:12,0:12:7:0,7,149	0/0:10,0:9:5.60:0,6,123	0/1:10,0:10:1.55:2,0,220	0/0:10,0:10:30.10:0,30,450	0/0:12,0:12:28.37:0,28,412	0/0:16,0:15:24.44:0,24,351	0/0:21,0:21:0.70:0,1,60	0/1:15,0:15:2.90:3,0,402	0/1:23,2:25:23.62:24,0,156	0/0:3,0:3:3.01:0,3,43
chr10	43943097	.	TTTCTTTCTTTCTTTC	T	5246.75	PASS	AB=1.000;AC=24;AF=0.429;AN=56;BaseQRankSum=5.774;DP=440;FS=9.675;HRun=0;HaplotypeScore=141.7495;InbreedingCoeff=0.8313;MQ=58.94;MQ0=15;MQRankSum=-1.924;QD=26.10;ReadPosRankSum=-1.373;VQSLOD=3.3273;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:22:45.59:892,46,0	0/0:3,0:3:9.03:0,9,301	0/0:23,0:10:7.30:0,7,106	0/0:16,0:3:8.22:0,8,59	1/1:0,10:10:18:242,18,0	0/0:11,0:11:33.11:0,33,1980	0/0:15,0:15:45.11:0,45,1456	0/0:28,0:27:52.59:0,53,1198	0/0:13,0:12:30.05:0,30,1524	1/1:9,0:9:18.32:352,18,0	1/1:18,0:18:23.23:360,23,0	0/0:15,0:15:12.04:0,12,578	0/0:25,0:25:36.07:0,36,1528	0/0:20,0:19:45.18:0,45,2468	0/1:22,0:22:4.22:4,0,106	0/0:16,0:16:36.48:0,36,613	0/0:14,0:13:32.05:0,32,634	0/1:23,0:23:1.80:261,0,2	1/1:11,1:11:33.05:596,33,0	1/1:10,0:9:15.03:306,15,0	1/1:10,0:10:24.96:452,25,0	0/0:9,0:9:27.08:0,27,1334	0/0:12,0:12:33.02:0,33,1139	0/0:19,0:18:34.66:0,35,1444	1/1:20,0:20:9:252,9,0	1/1:16,0:16:45.14:1074,45,0	1/1:23,0:23:12.51:413,13,0	1/1:5,0:4:3.90:42,4,0
chr10	43943099	.	TC	T	1568.96	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=9.437;DP=437;FS=6.529;HRun=1;HaplotypeScore=73.5463;InbreedingCoeff=0.8766;MQ=58.65;MQ0=15;MQRankSum=-1.501;QD=9.02;ReadPosRankSum=-0.601;VQSLOD=0.6753;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:18,4:21:48.57:397,49,0	0/0:3,0:3:9.03:0,9,102	0/0:25,0:10:5.40:0,5,143	0/0:14,1:3:5.42:0,5,77	1/1:11,0:11:11.89:86,12,0	0/0:12,0:12:33.11:0,33,505	0/0:15,0:15:45.12:0,45,620	0/0:27,0:26:63.97:0,64,664	0/0:14,0:13:33.04:0,33,454	1/1:8,0:8:19.23:137,19,0	1/1:18,0:18:26.35:171,26,0	0/0:15,0:15:12.04:0,12,160	0/0:25,0:25:36.12:0,36,531	0/0:19,0:18:54.03:0,54,760	0/0:22,0:22:5.30:0,5,50	0/0:15,0:15:32.80:0,33,350	0/0:14,0:13:23.22:0,23,405	1/1:22,1:23:8.08:42,8,0	1/1:12,0:11:28.11:299,28,0	1/1:10,0:9:12.04:96,12,0	1/1:9,1:10:19.73:150,20,0	0/0:9,0:9:27.08:0,27,390	0/0:12,0:12:31.31:0,31,455	0/0:19,0:18:36.52:0,37,474	1/1:20,0:20:7.97:46,8,0	1/1:14,1:15:36.90:276,37,0	1/1:18,1:20:10.79:64,11,0	1/1:5,0:4:2.78:20,3,0
chr10	43943107	.	TCTTTC	T	1751.94	PASS	AB=1.000;AC=24;AF=0.429;AN=56;BaseQRankSum=5.218;DP=468;FS=1.034;HRun=0;HaplotypeScore=96.0088;InbreedingCoeff=-0.0495;MQ=57.04;MQ0=16;MQRankSum=-3.788;QD=5.31;ReadPosRankSum=-0.368;VQSLOD=1.6532;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:20:35.58:171,0,36	0/1:5,0:5:4.20:4,0,18	0/1:31,0:11:12:12,0,75	0/0:19,0:4:2.45:0,2,20	0/1:14,0:14:32.42:32,0,35	0/0:13,0:13:33.67:0,34,830	0/0:11,0:11:33.08:0,33,531	0/1:23,0:22:47.82:48,0,49	0/0:14,0:13:27.64:0,28,642	0/1:10,0:10:39.31:41,0,39	0/1:20,0:20:50.34:50,0,87	0/0:15,0:15:12.04:0,12,224	0/0:26,0:26:18.44:0,18,552	0/0:20,0:19:16.86:0,17,822	1/1:2,20:21:5.99:91,6,0	1/1:14,0:14:34.62:522,35,0	0/1:16,0:15:89.73:90,0,90	1/1:24,0:24:12.01:139,12,0	0/1:18,0:17:74.62:75,0,84	0/1:14,0:12:51.52:52,0,81	0/1:10,0:9:18.12:127,0,18	0/0:7,0:7:21.07:0,21,474	0/0:13,0:12:24.44:0,24,394	0/1:20,0:19:28.16:28,0,467	0/1:21,0:21:0.52:51,0,1	0/1:21,0:21:97.15:246,0,97	1/1:22,0:22:9.37:140,9,0	1/1:3,0:2:1.82:5,2,0
chr10	43943109	.	TTTC	T	1070.81	PASS	AB=1.000;AC=25;AF=0.446;AN=56;BaseQRankSum=4.776;DP=478;FS=6.102;HRun=0;HaplotypeScore=89.1212;InbreedingCoeff=0.0417;MQ=58.13;MQ0=16;MQRankSum=-5.656;QD=3.04;ReadPosRankSum=1.123;VQSLOD=1.3584;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:21:51.02:69,0,51	1/1:5,0:5:6.03:119,6,0	0/0:32,0:13:6.35:0,6,103	0/1:19,0:4:0.98:1,0,2	0/1:14,0:14:16.45:16,0,27	0/0:14,0:14:38.92:0,39,560	0/0:12,0:12:34.32:0,34,305	1/1:9,14:22:23.72:372,24,0	0/0:13,0:12:26.98:0,27,415	0/0:10,0:10:4.96:0,5,35	0/1:20,0:20:1.37:1,0,57	0/0:15,0:15:11.97:0,12,121	0/1:26,0:26:17.37:17,0,274	0/1:20,0:19:31.96:32,0,440	1/1:22,0:21:5.80:40,6,0	1/1:15,0:15:24.74:192,25,0	0/1:16,0:15:30.37:120,0,30	0/1:26,0:25:1.19:57,0,1	0/1:19,0:18:17.30:17,0,91	0/1:14,0:12:1.57:2,0,57	0/0:9,0:8:2.86:0,3,31	0/0:7,0:7:21.04:0,21,283	0/0:14,0:13:1.63:0,2,195	0/1:22,0:21:50.87:51,0,277	0/1:22,0:22:16.78:17,0,17	0/1:22,0:22:48.21:48,0,82	1/1:22,0:22:7.69:60,8,0	1/1:2,0:1:0.89:2,1,0
chr10	43943110	.	TTC	T	729.37	PASS	AB=0.968;AC=20;AF=0.357;AN=56;BaseQRankSum=6.353;DP=479;FS=5.898;HRun=0;HaplotypeScore=83.9184;InbreedingCoeff=0.1737;MQ=59.38;MQ0=16;MQRankSum=-4.372;QD=2.68;ReadPosRankSum=0.644;VQSLOD=1.3342;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:21,1:20:16.06:16,0,100	0/1:5,0:5:0.63:47,0,1	0/1:29,1:13:17.49:17,0,102	0/0:20,0:4:5.09:0,5,19	0/1:14,0:14:0.41:0,0,39	0/0:14,0:14:38.96:0,39,472	0/0:12,0:12:34.55:0,35,280	0/1:23,1:23:0.28:287,0,0	0/0:14,0:13:7.97:0,8,321	0/0:11,0:11:8.23:0,8,69	0/0:20,0:20:4.91:0,5,85	0/0:16,0:16:11.95:0,12,96	0/0:26,0:26:14.70:0,15,242	0/0:20,0:19:9.76:0,10,352	1/1:20,2:21:5.99:58,6,0	1/1:13,1:14:28.74:214,29,0	0/1:13,2:14:47.01:60,0,47	1/1:27,0:26:2.75:79,3,0	0/0:19,0:18:1.26:0,1,133	0/0:14,0:12:4.74:0,5,85	0/1:8,0:7:4.15:4,0,37	0/0:7,0:7:21.03:0,21,223	0/0:14,0:13:17.70:0,18,184	0/1:20,2:21:41.81:42,0,219	0/1:22,0:22:4.33:4,0,30	0/1:22,0:22:14.45:14,0,116	1/1:22,0:22:7.32:39,7,0	1/1:2,0:1:1.25:3,1,0
chr10	43943298	.	T	TA	1464.98	PASS	AB=0.827;AC=18;AF=0.321;AN=56;BaseQRankSum=-0.109;DP=496;FS=0.472;HRun=12;HaplotypeScore=59.8646;InbreedingCoeff=0.7768;MQ=75.23;MQ0=2;MQRankSum=0.503;QD=10.24;ReadPosRankSum=1.326;VQSLOD=2.8681;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,2:30:18.09:0,18,439	1/1:2,0:5:5.78:33,6,0	0/0:23,0:11:11.94:0,12,75	0/1:22,0:18:39.64:40,0,44	0/1:9,7:16:95.20:138,0,95	0/0:12,1:13:29.79:0,30,215	0/0:7,0:7:14.91:0,15,109	0/0:21,0:21:50.61:0,51,367	0/0:19,0:20:43.74:0,44,309	0/0:16,0:17:33.86:0,34,228	0/0:19,0:22:57.97:0,58,399	1/1:6,8:14:5.17:212,5,0	1/1:5,14:19:17.16:328,17,0	1/1:7,8:15:23.87:218,24,0	0/0:27,0:27:67.60:0,68,480	0/0:18,0:20:24.04:0,24,245	1/1:1,0:17:39.77:199,40,0	0/0:18,0:18:41.72:0,42,304	0/0:29,0:29:68.42:0,68,490	0/0:20,0:20:47.61:0,48,345	0/0:14,0:14:23.67:0,24,164	1/1:1,4:6:11.86:102,12,0	1/1:3,6:10:18.75:162,19,0	1/1:3,14:17:24.04:234,24,0	0/0:14,0:14:32.65:0,33,230	0/0:22,0:22:53.64:0,54,391	0/0:20,0:20:59.61:0,60,433	0/0:15,0:15:14.47:0,14,108
chr10	43944435	.	T	TG	2880.64	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-12.047;DP=766;FS=5.101;HRun=1;HaplotypeScore=69.9910;InbreedingCoeff=0.9998;MQ=90.13;MQ0=0;MQRankSum=-4.809;QD=39.46;ReadPosRankSum=-0.068;VQSLOD=4.1287;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:96.31:0,96,1246	1/1:0,10:10:30.10:450,30,0	0/0:29,0:29:84.24:0,84,1072	0/0:29,0:29:83.73:0,84,1014	0/0:22,0:22:63.20:0,63,815	0/0:28,0:28:78.23:0,78,987	0/0:22,0:22:63.19:0,63,802	1/1:0,29:29:87.28:1270,87,0	0/0:30,0:30:90.29:0,90,1169	0/0:35,0:35:96.30:0,96,1234	0/0:16,0:16:42.14:0,42,544	0/0:30,0:30:87.28:0,87,1129	0/0:27,0:27:81.25:0,81,1035	0/0:25,0:25:69.22:0,69,896	0/0:42,0:42:99:0,123,1597	0/0:24,0:24:72.23:0,72,935	1/1:0,34:34:87.29:1304,87,0	0/0:20,0:20:60.19:0,60,778	0/0:28,0:28:81.24:0,81,1034	0/0:35,0:35:99:0,99,1257	0/0:29,0:29:87.27:0,87,1115	0/0:29,0:29:87.27:0,87,1114	0/0:26,0:26:78.22:0,78,983	0/0:28,0:28:81.26:0,81,1052	0/0:28,0:28:78.24:0,78,999	0/0:19,0:19:51.16:0,51,662	0/0:39,0:39:99:0,111,1441	0/0:21,0:21:54.17:0,54,701
chr10	43947567	.	G	GGAA	11055.25	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-16.470;DP=801;FS=22.236;HRun=0;HaplotypeScore=103.6677;InbreedingCoeff=0.9987;MQ=67.00;MQ0=1;MQRankSum=-1.303;QD=38.25;ReadPosRankSum=5.014;VQSLOD=3.9962;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,111,1768	1/1:0,13:13:21.07:473,21,0	0/0:27,0:15:23.21:0,23,427	0/0:40,0:33:59.42:0,59,1035	0/0:22,0:22:66.16:0,66,983	0/0:18,0:18:50.88:0,51,690	0/0:35,0:35:99:0,101,1542	1/1:2,29:33:74.12:1501,74,0	0/0:22,0:22:66.17:0,66,1008	0/0:20,0:20:54.15:0,54,847	0/0:19,0:19:57.19:0,57,933	1/1:2,47:49:66.23:1518,66,0	1/1:2,31:35:72.25:1618,72,0	1/1:2,44:46:90.31:2026,90,0	0/0:34,0:34:99:0,99,1643	0/0:32,0:32:90.27:0,90,1443	1/1:2,42:45:63.22:1452,63,0	0/0:28,0:27:75.25:0,75,1231	0/0:22,0:22:61.62:0,62,861	0/0:25,0:25:66.01:0,66,1056	0/0:46,0:46:99:0,132,2067	1/1:2,15:17:33.07:712,33,0	1/1:1,15:16:26.67:559,27,0	1/1:2,33:35:54.18:1196,54,0	0/0:23,0:23:69.21:0,69,1106	0/0:22,0:22:63.21:0,63,1036	0/0:27,0:27:81.24:0,81,1309	0/0:11,0:11:33.11:0,33,550
chr10	43947813	.	C	CTG	12371.81	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-17.666;DP=797;FS=11.459;HRun=0;HaplotypeScore=87.2690;InbreedingCoeff=0.9998;MQ=88.90;MQ0=0;MQRankSum=-2.064;QD=50.09;ReadPosRankSum=2.813;VQSLOD=5.3720;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,150,2324	1/1:0,15:15:36.12:731,36,0	0/0:29,0:29:84.15:0,84,1191	0/0:30,0:30:68.64:0,69,1107	0/0:29,0:29:87.11:0,87,1271	0/0:26,0:26:78.24:0,78,1220	0/0:30,0:30:90.30:0,90,1432	1/1:1,42:43:99:2389,123,0	0/0:28,0:28:81.10:0,81,1203	0/0:26,0:26:78.19:0,78,1170	0/0:19,0:19:53.94:0,54,785	1/1:0,37:37:93.32:1888,93,0	1/1:0,25:27:54.19:1094,54,0	1/1:1,30:31:66.23:1339,66,0	0/0:36,0:36:99:0,105,1570	0/0:37,0:37:99:0,111,1726	1/1:2,27:29:72.25:1461,72,0	0/0:23,0:23:69.22:0,69,1095	0/0:21,0:21:60.15:0,60,943	0/0:22,0:22:63.12:0,63,922	0/0:46,0:46:99:0,138,2157	1/1:1,20:22:51.18:1034,51,0	1/1:0,11:12:33.11:669,33,0	1/1:0,31:31:87.30:1766,87,0	0/0:22,0:22:63.10:0,63,907	0/0:34,0:34:96.20:0,96,1411	0/0:28,0:28:84.15:0,84,1202	0/0:11,0:11:27.09:0,27,431
chr10	43949797	.	TTAAAAAAAAAAAA	T	4471.42	PASS	AB=0.965;AC=32;AF=0.571;AN=56;BaseQRankSum=1.178;DP=479;FS=47.306;HRun=0;HaplotypeScore=141.7093;InbreedingCoeff=-0.0439;MQ=61.59;MQ0=27;MQRankSum=1.895;QD=12.46;ReadPosRankSum=-0.022;VQSLOD=1.8794;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:18,0:18:42.55:43,0,1723	1/1:0,9:10:17.78:381,18,0	0/0:41,0:10:24.38:0,24,458	0/0:39,0:14:12.76:0,13,400	0/1:19,0:19:99:103,0,1142	0/0:12,0:11:30.07:0,30,1015	0/0:13,0:13:39.06:0,39,1384	1/1:3,0:21:59.21:617,59,0	0/0:15,0:14:42.06:0,42,1468	0/1:18,0:17:99:175,0,1269	0/1:10,0:10:28.24:28,0,949	1/1:1,16:17:6.02:219,6,0	1/1:11,0:9:17.22:229,17,0	1/1:23,1:23:67.57:615,68,0	0/1:15,0:14:80.45:194,0,80	1/1:1,0:19:4.91:51,5,0	1/1:1,16:18:9.03:323,9,0	0/1:11,0:10:64.57:65,0,578	0/1:15,0:14:99:106,0,1063	0/1:16,0:16:99:138,0,826	0/1:7,0:7:74.19:74,0,432	1/1:0,9:9:20.64:307,21,0	0/1:1,15:16:1.50:207,0,1	1/1:0,1:9:8.92:231,9,0	0/1:13,0:12:78.52:79,0,1007	0/1:24,0:24:99:153,0,1972	0/1:11,0:11:93.84:94,0,873	0/1:22,0:17:38.56:39,0,1366
chr10	43952355	.	C	CA	1583.91	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-8.521;DP=696;FS=1.378;HRun=0;HaplotypeScore=66.0370;InbreedingCoeff=0.9873;MQ=74.02;MQ0=0;MQRankSum=-2.406;QD=42.81;ReadPosRankSum=2.413;VQSLOD=4.3943;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,138,1918	0/0:9,0:9:27.09:0,27,377	0/0:13,0:13:22.39:0,22,255	0/0:9,0:9:18.94:0,19,232	0/0:19,0:19:54.18:0,54,735	0/0:23,0:23:69.19:0,69,940	0/0:42,0:42:99:0,126,1757	0/0:33,0:33:96.28:0,96,1317	0/0:23,0:23:66.22:0,66,910	0/0:27,0:27:78.25:0,78,1069	0/0:16,0:16:42.14:0,42,580	0/0:39,0:39:99:0,114,1525	0/0:28,0:28:84.28:0,84,1162	0/0:28,0:28:81.27:0,81,1130	0/0:24,0:24:69.22:0,69,946	0/0:30,0:30:87.29:0,87,1210	1/1:0,37:37:99:1679,105,0	0/0:26,0:26:78.26:0,78,1086	0/0:13,0:13:33.11:0,33,461	0/0:20,0:20:57.19:0,57,792	0/0:61,0:61:99:0,175,2424	0/0:21,0:21:63.17:0,63,856	0/0:8,0:8:24.08:0,24,332	0/0:21,0:21:63.21:0,63,878	0/0:18,0:18:48.16:0,48,668	0/0:22,0:22:66.22:0,66,919	0/0:19,0:19:51.17:0,51,712	0/0:20,0:20:60.20:0,60,838
chr10	43956103	.	CTTTTT	C	4619.22	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=11.025;DP=593;FS=13.741;HRun=17;HaplotypeScore=123.1671;InbreedingCoeff=0.9699;MQ=68.79;MQ0=1;MQRankSum=-6.629;QD=26.86;ReadPosRankSum=7.458;VQSLOD=1.8810;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:23:59.44:0,59,1361	1/1:4,6:9:11.87:180,12,0	0/0:25,0:16:18.89:0,19,218	0/0:12,0:9:12.03:0,12,102	0/0:26,0:30:78.27:0,78,1653	0/0:18,0:23:54.15:0,54,1204	0/0:18,0:22:51.17:0,51,1180	1/1:13,12:25:38.53:575,39,0	0/0:19,0:19:48.16:0,48,1179	0/0:23,0:26:60.20:0,60,1227	0/0:19,0:19:38.49:0,38,838	1/1:6,21:28:56.47:808,56,0	1/1:2,18:20:48.13:722,48,0	1/1:3,16:20:38.93:571,39,0	0/0:26,0:28:72.24:0,72,1641	0/0:26,0:30:78.27:0,78,1790	1/1:5,15:20:5.63:382,6,0	0/0:18,0:20:45.11:0,45,1076	0/0:23,0:24:39.11:0,39,691	0/0:23,0:24:57.18:0,57,1228	0/0:12,0:11:22.58:0,23,382	1/1:6,17:24:35.46:525,35,0	1/1:2,12:14:25.78:403,26,0	1/1:0,11:11:30.10:452,30,0	0/0:21,0:22:51.15:0,51,1232	0/0:21,0:23:66.21:0,66,1405	0/0:24,0:29:81.28:0,81,1956	0/0:6,0:8:21.07:0,21,491
chr10	43956670	.	CT	C	1195.19	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=1.576;DP=615;FS=30.257;HRun=18;HaplotypeScore=88.5630;InbreedingCoeff=0.7998;MQ=67.15;MQ0=3;MQRankSum=1.355;QD=4.43;ReadPosRankSum=5.057;VQSLOD=0.0789;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:19:5.68:0,6,28	1/1:4,6:11:11.76:87,12,0	0/0:29,0:10:7.01:0,7,32	0/1:23,0:10:5.10:10,0,5	0/0:4,0:23:18.01:0,18,89	0/0:18,0:18:22.41:0,22,156	0/0:18,1:21:8.53:0,9,173	1/1:20,12:33:29.06:159,29,0	0/0:17,0:16:5.37:0,5,115	0/0:21,0:20:19.88:0,20,123	0/0:5,0:17:12.39:0,12,59	1/1:11,15:28:30.67:182,31,0	1/1:11,19:30:36.77:234,37,0	1/1:12,10:21:11.25:96,11,0	1/1:9,1:23:5.84:34,6,0	1/1:6,1:23:31.01:102,31,0	1/1:9,12:22:33.10:174,33,0	0/0:19,0:21:23.33:0,23,130	0/0:14,0:13:14.99:0,15,83	0/0:6,0:15:6.76:0,7,42	0/0:5,0:6:5.53:0,6,22	1/1:8,10:18:7.71:75,8,0	1/1:9,15:25:28.65:176,29,0	1/1:2,8:12:11.28:74,11,0	0/0:10,0:29:5.78:0,6,32	0/0:10,0:27:23.06:0,23,167	0/0:11,0:38:17.46:0,17,101	0/0:10,0:27:19.72:0,20,96
chr10	43960683	.	AC	A	1314.99	PASS	AB=0.872;AC=32;AF=0.571;AN=56;BaseQRankSum=3.328;DP=389;FS=13.595;HRun=12;HaplotypeScore=49.9274;InbreedingCoeff=0.4301;MQ=79.55;MQ0=1;MQRankSum=-1.725;QD=4.83;ReadPosRankSum=3.028;VQSLOD=0.4289;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:9,8:18:16.95:122,17,0	1/1:3,2:5:2.96:23,3,0	0/0:14,0:14:10.36:0,10,72	0/1:15,0:15:8.05:8,0,114	1/1:13,1:16:19.44:126,19,0	0/1:18,1:20:1.05:93,0,1	0/1:13,3:16:26.92:76,0,27	0/0:16,0:16:3.01:0,3,30	0/0:14,0:14:9.02:0,9,91	1/1:8,6:14:17.54:118,18,0	0/1:3,4:7:2.19:18,0,2	0/0:17,0:18:5.29:0,5,171	0/0:7,0:7:8.97:0,9,71	0/0:18,0:18:8.76:0,9,68	0/1:17,2:19:43.77:44,0,95	0/1:15,1:16:17.67:18,0,50	1/1:18,4:24:47.90:335,48,0	1/1:8,0:8:2.93:23,3,0	1/1:8,2:12:7.86:48,8,0	1/1:7,2:9:5.93:43,6,0	1/1:17,5:21:14.87:116,15,0	0/0:10,0:10:11.75:0,12,103	0/0:4,0:7:8.97:0,9,71	0/0:13,0:13:17.93:0,18,149	1/1:7,5:13:4.99:29,5,0	1/1:8,1:9:8.93:66,9,0	1/1:5,7:13:21.97:149,22,0	1/1:11,2:14:7.87:45,8,0
chr10	43962814	.	TC	T	3645.23	PASS	AB=0.669;AC=40;AF=0.714;AN=56;BaseQRankSum=2.617;DP=374;FS=29.505;HRun=10;HaplotypeScore=52.6051;InbreedingCoeff=0.4878;MQ=70.69;MQ0=1;MQRankSum=-0.104;QD=11.50;ReadPosRankSum=2.515;VQSLOD=0.9168;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,13:18:41.91:357,42,0	0/1:2,5:7:4.75:89,0,5	0/1:11,0:10:9.88:10,0,108	0/0:7,0:7:3.46:0,3,135	1/1:2,15:18:32.90:268,33,0	0/0:7,0:7:12.03:0,12,133	0/0:16,1:17:18.69:0,19,400	0/0:15,0:16:23.86:0,24,239	0/0:10,0:10:18.04:0,18,191	0/1:3,8:11:1.24:158,0,1	1/1:4,6:10:17.98:156,18,0	0/1:4,0:15:4.22:31,0,4	1/1:4,0:11:1.49:28,1,0	1/1:0,0:13:20.37:60,20,0	1/1:4,10:14:4.88:209,5,0	0/1:8,4:12:13.17:66,0,13	1/1:4,12:16:26.96:234,27,0	1/1:7,14:21:32.92:286,33,0	1/1:5,11:16:32.92:278,33,0	1/1:2,12:14:29.89:250,30,0	1/1:3,6:9:11.99:104,12,0	1/1:2,0:13:20.37:60,20,0	1/1:0,0:9:14.25:42,14,0	1/1:10,0:21:24.20:71,24,0	1/1:6,6:12:23.44:189,23,0	1/1:3,9:12:26.98:234,27,0	1/1:11,12:23:35.89:306,36,0	0/1:1,9:10:0.27:158,0,0
chr10	43967035	.	CAA	C	7573.94	PASS	AB=0.552;AC=17;AF=0.304;AN=56;BaseQRankSum=15.367;DP=766;FS=0.000;HRun=7;HaplotypeScore=92.9341;InbreedingCoeff=0.9193;MQ=77.44;MQ0=2;MQRankSum=-4.052;QD=30.79;ReadPosRankSum=1.806;VQSLOD=4.6941;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:90.31:0,90,1574	0/1:3,13:16:13.35:420,0,13	0/0:24,0:24:66.06:0,66,944	0/0:15,0:14:33.58:0,34,541	0/0:36,0:36:99:0,108,1862	0/0:24,0:24:69.22:0,69,1151	0/0:18,0:18:51.16:0,51,863	1/1:4,36:40:99:1228,102,0	0/0:28,0:28:81.24:0,81,1376	0/0:33,0:33:90.30:0,90,1547	0/0:32,0:32:87.28:0,87,1468	1/1:3,36:38:87.27:1109,87,0	1/1:3,28:31:72.23:917,72,0	1/1:1,28:29:55.25:1038,55,0	0/0:35,0:35:99:0,102,1709	0/0:38,0:38:99:0,111,1883	1/1:0,20:19:51.16:650,51,0	0/0:19,0:19:51.16:0,51,852	0/0:23,0:23:66.20:0,66,1088	0/0:34,0:34:90.30:0,90,1548	0/0:24,0:24:72.25:0,72,1259	1/1:4,25:29:69.21:874,69,0	1/1:3,22:25:60.18:765,60,0	1/1:0,17:17:45.14:573,45,0	0/0:28,0:28:78.27:0,78,1361	0/0:27,0:27:78.27:0,78,1362	0/0:34,0:34:90.31:0,90,1574	0/0:16,0:16:48.16:0,48,840
chr10	43969288	.	A	AT	4371.93	PASS	AB=0.568;AC=17;AF=0.304;AN=56;BaseQRankSum=-9.368;DP=581;FS=5.144;HRun=9;HaplotypeScore=58.7661;InbreedingCoeff=0.9167;MQ=76.25;MQ0=0;MQRankSum=-0.912;QD=23.38;ReadPosRankSum=0.830;VQSLOD=5.7744;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,115,1144	1/1:2,7:9:18.05:199,18,0	0/0:22,0:17:23.01:0,23,189	0/0:15,0:10:17.98:0,18,156	0/0:18,0:18:47.96:0,48,413	0/0:16,0:16:47.99:0,48,417	0/0:35,0:35:77.93:0,78,671	1/1:8,17:25:42.97:450,43,0	0/0:17,0:17:44.35:0,44,368	0/0:23,0:23:50.96:0,51,443	0/0:15,0:15:38.98:0,39,339	1/1:3,21:24:51.14:564,51,0	1/1:2,20:22:57.15:630,57,0	1/1:0,21:21:63.17:697,63,0	0/0:27,0:27:71.96:0,72,620	0/0:10,0:10:29.99:0,30,260	1/1:3,33:36:58.17:870,58,0	0/0:22,0:22:65.96:0,66,567	0/0:15,1:16:11.81:0,12,331	0/0:21,0:21:47.97:0,48,417	0/0:13,0:13:38.98:0,39,334	1/1:4,15:20:41.95:443,42,0	1/1:2,7:9:12.03:133,12,0	0/1:5,16:21:6.99:386,0,7	0/0:17,0:17:41.96:0,42,364	0/0:30,0:30:71.95:0,72,625	0/0:14,0:14:32.98:0,33,286	0/0:14,0:14:35.99:0,36,313
chr10	43969608	.	T	TG	7365.30	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=5.892;DP=662;FS=14.926;HRun=2;HaplotypeScore=97.9680;InbreedingCoeff=0.9974;MQ=82.85;MQ0=0;MQRankSum=-11.546;QD=37.77;ReadPosRankSum=-0.155;VQSLOD=3.1993;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,120,1485	1/1:1,7:8:17.81:256,18,0	0/0:18,0:17:45.43:0,45,425	0/0:34,0:32:86.15:0,86,923	0/0:20,0:20:57.18:0,57,702	0/0:24,0:24:69.22:0,69,855	0/0:30,0:30:84.26:0,84,1038	1/1:3,25:28:84.28:1188,84,0	0/0:21,0:21:60.16:0,60,718	0/0:19,0:19:57.18:0,57,707	0/0:11,0:11:30.08:0,30,360	1/1:1,33:34:96.32:1380,96,0	1/1:3,18:21:63.18:868,63,0	1/1:2,23:26:75.24:1051,75,0	0/0:25,0:25:72.22:0,72,892	0/0:31,0:31:93.29:0,93,1152	1/1:6,22:28:69.18:939,69,0	0/0:28,1:29:38.04:0,38,907	0/0:23,0:23:69.20:0,69,837	0/0:22,0:22:57.16:0,57,690	0/0:51,0:51:99:0,137,1651	1/1:1,9:10:27.09:387,27,0	1/1:2,9:11:21.07:301,21,0	1/1:5,24:29:72.22:995,72,0	0/0:11,0:11:30.07:0,30,357	0/0:26,0:26:78.24:0,78,954	0/0:23,0:23:69.22:0,69,855	0/0:8,0:8:24.08:0,24,297
chr10	43969636	.	C	CA	8297.14	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=6.326;DP=672;FS=20.105;HRun=1;HaplotypeScore=89.4786;InbreedingCoeff=0.9973;MQ=75.74;MQ0=0;MQRankSum=-8.826;QD=42.55;ReadPosRankSum=-0.847;VQSLOD=2.6431;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,114,1556	1/1:0,9:9:15.05:239,15,0	0/0:18,0:17:43.93:0,44,537	0/0:27,0:25:66.22:0,66,906	0/0:21,0:21:63.21:0,63,872	0/0:21,0:21:60.20:0,60,839	0/0:29,0:29:84.24:0,84,1152	1/1:3,22:25:72.22:1101,72,0	0/0:22,0:22:66.18:0,66,900	0/0:20,0:20:51.17:0,51,713	0/0:12,0:12:33.10:0,33,442	1/1:0,33:33:93.32:1482,93,0	1/1:0,26:26:66.23:1052,66,0	1/1:0,30:30:90.31:1422,90,0	0/0:24,0:24:72.24:0,72,1006	0/0:28,0:28:84.28:0,84,1170	1/1:1,23:24:66.22:1049,66,0	0/0:28,0:28:81.27:0,81,1132	0/0:28,0:28:84.26:0,84,1130	0/0:20,0:20:60.19:0,60,821	0/0:50,0:50:99:0,147,2054	1/1:1,9:10:30.10:470,30,0	1/1:0,12:12:33.11:527,33,0	1/1:1,25:25:60:957,60,0	0/0:17,0:17:51.14:0,51,692	0/0:31,0:31:90.29:0,90,1238	0/0:30,0:30:90.30:0,90,1257	0/0:12,0:12:36.12:0,36,502
chr10	43971413	.	GGT	G	241.52	PASS	AB=0.908;AC=14;AF=0.259;AN=54;BaseQRankSum=2.386;DP=626;FS=2.942;HRun=0;HaplotypeScore=97.2283;InbreedingCoeff=-0.0691;MQ=72.63;MQ0=15;MQRankSum=-2.549;QD=0.87;ReadPosRankSum=0.568;VQSLOD=1.6724;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:24,1:26:37.38:37,0,243	1/1:3,0:4:2.84:14,3,0	0/0:29,0:18:3.01:0,3,45	./.	0/0:6,0:5:6.02:0,6,91	0/1:33,3:37:45.14:45,0,743	0/1:34,3:37:3.22:3,0,312	0/1:24,0:27:19.24:19,0,25	0/1:17,3:20:72.69:73,0,245	0/0:9,0:18:27.83:0,28,273	0/0:3,0:5:3:0,3,26	0/0:25,0:28:26.93:0,27,220	0/0:19,0:23:32.15:0,32,264	0/0:22,0:22:23.54:0,24,193	0/0:15,0:33:30:0,30,276	0/0:17,0:42:44.99:0,45,407	1/1:23,0:24:9.41:44,9,0	0/0:31,0:31:36.02:0,36,465	0/1:13,1:14:21.26:21,0,105	0/0:12,0:16:24.04:0,24,282	0/1:30,1:32:20.33:20,0,231	0/0:7,0:13:17.64:0,18,179	0/0:5,0:10:8.91:0,9,79	0/0:19,0:25:29.02:0,29,273	0/1:11,2:13:48.46:48,0,163	0/1:20,1:20:15.27:15,0,159	0/1:19,2:22:50.58:51,0,280	0/0:9,0:8:6.02:0,6,88
chr10	43971501	.	A	AG	5500.50	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-8.800;DP=443;FS=4.402;HRun=1;HaplotypeScore=48.2080;InbreedingCoeff=0.9766;MQ=93.44;MQ0=0;MQRankSum=-3.981;QD=43.31;ReadPosRankSum=0.632;VQSLOD=4.9132;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:45.15:0,45,629	1/1:0,12:12:33.11:528,33,0	0/0:32,0:32:96.13:0,96,1262	0/0:22,0:22:66.13:0,66,850	0/0:13,0:13:36.10:0,36,484	0/0:27,0:27:81.27:0,81,1133	0/0:24,0:24:69.23:0,69,965	1/1:1,34:35:99:1568,99,0	0/0:20,0:20:60.20:0,60,839	0/0:13,0:13:39.13:0,39,545	0/0:4,0:4:12.04:0,12,168	1/1:0,10:10:24.08:384,24,0	1/1:0,13:13:39.13:624,39,0	1/1:1,9:10:24.08:384,24,0	0/0:22,0:22:57.19:0,57,796	0/0:18,0:18:51.17:0,51,713	1/1:1,18:19:49.05:768,49,0	0/0:8,0:8:24.08:0,24,336	0/0:13,0:13:39.13:0,39,545	0/0:2,0:2:6.02:0,6,82	0/0:27,0:27:72.24:0,72,1005	1/1:0,13:13:36.12:576,36,0	1/1:0,7:7:21.07:336,21,0	1/1:0,8:8:21.07:334,21,0	0/0:15,0:15:45.15:0,45,622	0/0:15,0:15:45.15:0,45,630	0/0:11,0:11:33.10:0,33,442	0/0:12,0:12:36.12:0,36,503
chr10	43974087	.	T	TACCAG	4225.11	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=11.706;DP=644;FS=29.920;HRun=0;HaplotypeScore=141.5219;InbreedingCoeff=0.9555;MQ=67.23;MQ0=0;MQRankSum=-11.049;QD=74.12;ReadPosRankSum=2.887;VQSLOD=3.6257;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,151,3436	0/0:4,0:4:12.04:0,12,261	0/0:26,0:26:64.57:0,65,1575	0/0:24,0:21:63.18:0,63,1322	0/0:34,0:34:99:0,102,2180	0/0:25,0:25:75.24:0,75,1668	0/0:29,0:29:81.24:0,81,1750	0/0:19,0:19:53.04:0,53,1008	0/0:28,0:28:84.27:0,84,1894	0/0:28,0:28:84.28:0,84,1868	0/0:19,0:19:57.19:0,57,1257	1/1:0,9:9:27.09:712,27,0	1/1:0,10:11:33.11:853,33,0	1/1:0,6:6:18.06:473,18,0	0/0:37,0:37:99:0,105,2342	0/0:34,0:34:96.32:0,96,2139	0/0:15,0:15:39.13:0,39,878	0/0:28,0:28:81.24:0,81,1768	0/0:26,0:26:78.27:0,78,1770	0/0:18,0:18:54.19:0,54,1259	0/0:32,0:32:96.33:0,96,2173	1/1:2,8:10:27.09:739,27,0	1/1:1,18:19:54.17:1368,54,0	1/1:1,1:2:3.01:80,3,0	0/0:31,0:31:93.30:0,93,2118	0/0:26,0:26:78.27:0,78,1791	0/0:38,0:38:99:0,114,2629	0/0:14,0:14:42.14:0,42,979
chr10	43974088	.	T	TAAACA	4074.33	PASS	AB=0.625;AC=11;AF=0.196;AN=56;BaseQRankSum=12.014;DP=653;FS=31.348;HRun=0;HaplotypeScore=167.1041;InbreedingCoeff=0.8418;MQ=66.58;MQ0=0;MQRankSum=-11.660;QD=57.38;ReadPosRankSum=2.111;VQSLOD=2.3436;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,150,3386	0/0:4,0:4:12.03:0,12,234	0/0:27,0:27:70.96:0,71,1511	0/0:24,0:21:63.18:0,63,1320	0/0:32,0:32:96.32:0,96,2153	0/0:25,0:25:75.26:0,75,1689	0/0:27,0:27:78.26:0,78,1756	0/0:18,0:18:53.20:0,53,1104	0/0:27,0:27:81.28:0,81,1863	0/0:28,0:28:62.46:0,62,1792	0/0:19,0:19:54.19:0,54,1257	0/1:6,9:15:15.26:696,0,15	1/1:2,11:13:30.93:860,31,0	1/1:3,6:9:8.94:463,9,0	0/0:37,0:37:99:0,105,2424	0/0:34,0:34:99:0,99,2243	0/0:15,0:15:39.09:0,39,858	0/0:28,0:28:78.22:0,78,1748	0/0:26,0:26:78.21:0,78,1721	0/0:18,0:18:54.19:0,54,1259	0/0:32,0:32:96.32:0,96,2170	1/1:3,8:11:15.23:546,15,0	1/1:1,18:19:50.28:1344,50,0	1/1:3,1:4:6.02:167,6,0	0/0:31,0:31:93.32:0,93,2147	0/0:26,0:26:78.27:0,78,1818	0/0:39,0:39:99:0,114,2607	0/0:14,0:14:42.14:0,42,979
chr10	43974325	.	T	TGG	358.75	PASS	AC=8;AF=0.167;AN=48;BaseQRankSum=3.450;DP=367;FS=2.487;HRun=0;HaplotypeScore=72.2045;InbreedingCoeff=0.8171;MQ=63.10;MQ0=12;MQRankSum=-4.139;QD=29.90;ReadPosRankSum=2.165;VQSLOD=5.4428;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:35.47:0,35,419	./.	0/0:23,0:13:12.65:0,13,229	0/0:11,0:3:8.56:0,9,68	0/0:20,0:19:51.09:0,51,614	0/0:21,0:21:54.18:0,54,855	0/0:20,0:21:25.43:0,25,781	./.	0/0:16,0:15:39.13:0,39,620	0/0:22,0:22:62.89:0,63,772	0/0:20,0:20:54.10:0,54,675	./.	1/1:1,1:1:3.01:51,3,0	./.	0/0:24,0:23:60.19:0,60,912	0/0:19,0:19:54.18:0,54,865	1/1:0,1:2:6.02:94,6,0	0/0:23,0:22:36.12:0,36,480	0/0:16,0:16:48.10:0,48,576	0/0:12,0:10:23.10:0,23,280	0/0:9,0:9:21.04:0,21,254	1/1:1,4:4:12.04:207,12,0	1/1:0,3:3:9.03:138,9,0	0/0:0,1:1:0.47:0,0,1	0/0:20,0:20:36.06:0,36,423	0/0:24,0:24:69.69:0,70,890	0/0:23,0:23:50.39:0,50,564	0/0:7,0:7:12.04:0,12,149
chr10	43975574	.	CT	C	8788.77	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=18.070;DP=798;FS=2.733;HRun=3;HaplotypeScore=90.6745;InbreedingCoeff=0.9984;MQ=68.91;MQ0=1;MQRankSum=-7.883;QD=33.42;ReadPosRankSum=2.558;VQSLOD=5.2762;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,120,1626	1/1:2,6:8:18.06:223,18,0	0/0:20,0:19:51.15:0,51,674	0/0:24,0:24:66.15:0,66,857	0/0:26,0:26:78.21:0,78,1051	0/0:28,0:28:84.26:0,84,1174	0/0:22,0:22:66.20:0,66,914	1/1:0,40:40:99:1460,120,0	0/0:35,0:35:99:0,105,1457	0/0:38,0:38:99:0,111,1568	0/0:22,0:22:66.22:0,66,937	1/1:0,37:37:96.26:1189,96,0	1/1:0,19:19:51.16:631,51,0	1/1:0,39:39:99:1407,114,0	0/0:32,0:32:93.31:0,93,1336	0/0:36,0:36:99:0,102,1379	1/1:1,34:35:84.26:1041,84,0	0/0:24,1:24:35.05:0,35,936	0/0:24,0:24:72.23:0,72,1001	0/0:36,0:36:99:0,108,1501	0/0:23,0:23:69.23:0,69,993	1/1:0,30:30:87.19:1054,87,0	1/1:0,30:30:81.25:1003,81,0	1/1:1,24:25:63.20:780,63,0	0/0:36,0:36:99:0,108,1516	0/0:29,0:29:87.27:0,87,1217	0/0:31,0:31:87.28:0,87,1227	0/0:8,0:8:24.08:0,24,345
chr10	43977261	.	C	CAATA	14460.03	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-3.874;DP=844;FS=5.565;HRun=0;HaplotypeScore=133.8799;InbreedingCoeff=1.0000;MQ=68.71;MQ0=0;MQRankSum=-7.680;QD=61.01;ReadPosRankSum=1.869;VQSLOD=6.5252;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:96.28:0,96,1702	1/1:1,11:12:33.11:822,33,0	0/0:38,0:33:78.24:0,78,1318	0/0:35,0:30:77.28:0,77,1261	0/0:38,0:38:99:0,102,1802	0/0:23,0:23:60.17:0,60,1056	0/0:18,0:18:42.13:0,42,753	1/1:6,23:30:78.22:1704,78,0	0/0:28,0:28:78.27:0,78,1449	0/0:37,0:37:99:0,99,1767	0/0:24,0:24:72.23:0,72,1312	1/1:2,24:27:75.26:1914,75,0	1/1:0,34:34:93.32:2375,93,0	1/1:1,27:29:60.21:1538,60,0	0/0:30,0:30:87.28:0,87,1563	0/0:40,0:40:99:0,111,1994	1/1:5,26:33:69.24:1780,69,0	0/0:20,0:20:57.12:0,57,965	0/0:31,0:29:81.12:0,81,1320	0/0:38,0:38:99:0,111,1958	0/0:38,0:38:99:0,108,1976	1/1:1,20:21:57.20:1340,57,0	1/1:3,19:23:47.83:1098,48,0	1/1:2,26:28:72.25:1891,72,0	0/0:30,0:30:84.25:0,84,1499	0/0:32,0:32:96.29:0,96,1662	0/0:38,0:37:99:0,108,1937	0/0:29,0:29:87.26:0,87,1532
chr10	43979587	.	GC	G	10551.26	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=14.772;DP=588;FS=9.046;HRun=1;HaplotypeScore=62.7449;InbreedingCoeff=0.9848;MQ=79.28;MQ0=0;MQRankSum=-3.031;QD=37.15;ReadPosRankSum=3.699;VQSLOD=5.0586;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,34:34:84.28:1171,84,0	0/0:2,0:2:6.02:0,6,96	0/0:15,0:15:45.12:0,45,642	0/0:13,0:13:39.11:0,39,550	1/1:0,28:28:60.12:833,60,0	0/0:18,0:18:54.18:0,54,860	0/0:18,0:18:54.17:0,54,839	0/0:22,0:21:57.18:0,57,868	0/0:22,0:22:66.19:0,66,1002	1/1:0,17:17:51.17:713,51,0	1/1:0,8:8:21.07:293,21,0	0/0:29,0:29:87.28:0,87,1367	0/0:24,0:24:72.25:0,72,1147	0/0:29,0:29:81.28:0,81,1294	0/0:22,0:22:66.20:0,66,1006	0/0:22,0:22:66.21:0,66,1026	0/0:26,0:26:78.27:0,78,1239	1/1:0,25:25:60.20:839,60,0	1/1:0,17:17:51.10:655,51,0	1/1:0,21:21:57.19:796,57,0	1/1:0,41:41:99:1677,120,0	0/0:12,0:12:36.12:0,36,575	0/0:16,0:16:39.12:0,39,599	0/0:14,0:14:42.13:0,42,640	1/1:0,27:27:78.26:1085,78,0	1/1:0,25:25:75.24:1024,75,0	1/1:0,29:29:75.25:1048,75,0	1/1:0,12:12:30.10:419,30,0
chr10	43979943	.	CTCTCTTAGAAA	C	9292.40	PASS	AB=0.813;AC=27;AF=0.482;AN=56;BaseQRankSum=5.738;DP=466;FS=9.807;HRun=0;HaplotypeScore=220.6334;InbreedingCoeff=0.0988;MQ=90.27;MQ0=0;MQRankSum=-11.299;QD=31.82;ReadPosRankSum=1.500;VQSLOD=3.0233;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:21,4:25:42.01:725,0,42	0/0:4,0:4:12.04:0,12,659	0/0:30,0:30:79.27:0,79,3510	0/0:27,0:26:78.26:0,78,3778	1/1:7,6:13:3.01:44,3,0	0/0:22,0:22:66.23:0,66,3601	0/0:19,0:19:57.18:0,57,2887	0/0:26,0:26:78.27:0,78,4372	0/0:15,0:15:45.15:0,45,2546	1/1:10,5:15:10.97:535,11,0	0/1:6,2:8:1.29:201,0,1	0/1:8,6:14:40.19:401,0,40	0/1:8,7:15:16.21:550,0,16	0/1:7,5:12:42.08:232,0,42	1/1:2,23:25:48.16:1712,48,0	1/1:3,18:21:26.35:1687,26,0	0/0:31,0:31:93.32:0,93,5154	1/1:20,1:21:13.43:180,13,0	0/1:8,2:10:23.17:201,0,23	0/1:6,0:6:22.88:98,0,23	0/1:18,11:29:3.28:608,0,3	1/1:3,3:6:6.02:208,6,0	0/1:10,0:10:8.48:305,0,8	1/1:4,6:10:2.75:107,3,0	0/1:9,2:11:26.63:309,0,27	0/1:11,5:16:27.99:362,0,28	0/1:9,10:18:15.58:818,0,16	0/1:6,0:6:0.19:10,0,0
chr10	43979944	.	T	TCCTC	8967.16	PASS	AB=0.799;AC=35;AF=0.625;AN=56;BaseQRankSum=10.069;DP=464;FS=20.518;HRun=0;HaplotypeScore=183.8270;InbreedingCoeff=0.6921;MQ=91.12;MQ0=0;MQRankSum=-13.344;QD=33.84;ReadPosRankSum=1.445;VQSLOD=3.4576;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,18:23:47.81:983,48,0	0/0:5,0:5:12.01:0,12,200	0/0:31,0:31:81.24:0,81,1393	0/0:28,0:27:78.23:0,78,1448	1/1:8,5:13:3.01:44,3,0	0/0:22,0:22:63.22:0,63,1242	0/0:19,0:19:57.16:0,57,1018	0/0:27,0:27:78.27:0,78,1519	0/0:15,0:15:45.15:0,45,899	1/1:8,7:15:2.19:672,2,0	1/1:2,6:8:15.01:243,15,0	1/1:8,6:14:32.24:568,32,0	1/1:9,6:15:32.86:658,33,0	1/1:6,6:12:19.23:483,19,0	0/1:24,0:24:4.33:4,0,267	0/0:21,0:21:41.84:0,42,339	0/0:31,0:31:93.32:0,93,1848	1/1:4,16:21:56.42:1270,56,0	0/1:5,5:10:22.41:497,0,22	1/1:0,5:5:8.62:148,9,0	1/1:19,10:29:29.90:509,30,0	1/1:4,0:4:4.83:85,5,0	1/1:2,6:10:19.36:324,19,0	1/1:7,3:10:4.26:68,4,0	1/1:4,7:11:27.02:516,27,0	1/1:7,8:16:27.93:819,28,0	0/1:12,7:18:11.78:655,0,12	1/1:3,3:6:18.06:420,18,0
chr10	43979948	.	TTA	T	3849.49	PASS	AC=38;AF=0.704;AN=54;BaseQRankSum=15.858;DP=432;FS=12.553;HRun=0;HaplotypeScore=165.5615;InbreedingCoeff=0.9042;MQ=93.48;MQ0=0;MQRankSum=-14.874;QD=16.52;ReadPosRankSum=6.012;VQSLOD=2.9105;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,18:22:49.11:379,49,0	0/0:5,0:5:15.05:0,15,285	0/0:29,0:29:72.36:0,72,1399	0/0:30,0:29:65.04:0,65,1414	./.	0/0:25,0:25:72.25:0,72,1405	0/0:20,0:20:60.21:0,60,1169	0/0:29,0:29:87.27:0,87,1688	0/0:17,0:17:51.17:0,51,1003	1/1:5,7:12:34.92:309,35,0	1/1:2,6:8:5.84:40,6,0	1/1:6,6:12:29.38:222,29,0	1/1:8,5:13:28.89:210,29,0	1/1:5,6:11:23.70:192,24,0	1/1:23,0:23:45.45:224,45,0	1/1:18,0:18:45.45:224,45,0	0/0:33,0:33:96.32:0,96,1885	1/1:1,17:18:46.59:540,47,0	1/1:2,6:8:23.72:235,24,0	1/1:0,5:5:8.85:72,9,0	1/1:11,10:21:29.38:224,29,0	1/1:3,0:3:5.21:22,5,0	1/1:1,6:7:11.68:83,12,0	1/1:6,3:9:2.84:14,3,0	1/1:2,7:9:18.32:166,18,0	1/1:5,9:14:27.97:320,28,0	1/1:10,7:17:40.72:281,41,0	1/1:0,3:3:9.02:93,9,0
chr10	43980315	.	T	TAC	11343.71	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=18.256;DP=847;FS=3.311;HRun=0;HaplotypeScore=123.2438;InbreedingCoeff=0.9994;MQ=77.95;MQ0=0;MQRankSum=-4.205;QD=45.37;ReadPosRankSum=2.328;VQSLOD=6.0813;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,138,2030	1/1:0,12:12:27.09:494,27,0	0/0:20,0:19:45.12:0,45,635	0/0:30,0:26:36.27:0,36,822	0/0:28,0:28:78.22:0,78,1124	0/0:29,0:29:81.27:0,81,1190	0/0:38,0:38:99:0,111,1614	1/1:6,26:32:93.32:1673,93,0	0/0:34,0:34:93.31:0,93,1368	0/0:47,0:47:99:0,135,1963	0/0:15,0:15:36.08:0,36,488	1/1:2,27:31:78.27:1422,78,0	1/1:3,36:39:99:1911,108,0	1/1:4,32:36:90.31:1646,90,0	0/0:37,0:37:99:0,108,1568	0/0:37,0:37:99:0,105,1542	1/1:3,23:26:60.20:1092,60,0	0/0:30,0:30:87.29:0,87,1270	0/0:25,0:25:72.24:0,72,1060	0/0:18,0:18:42.14:0,42,615	0/0:67,0:67:99:0,202,2956	1/1:2,14:16:42.14:763,42,0	1/1:0,14:14:33.11:604,33,0	1/1:4,40:44:96.33:1739,96,0	0/0:24,0:24:66.22:0,66,967	0/0:28,0:28:75.24:0,75,1086	0/0:33,0:33:96.32:0,96,1408	0/0:8,0:8:24.08:0,24,353
chr10	43984569	.	AT	A	4188.19	PASS	AB=0.745;AC=25;AF=0.446;AN=56;BaseQRankSum=-7.371;DP=722;FS=0.000;HRun=13;HaplotypeScore=127.3235;InbreedingCoeff=0.4769;MQ=70.34;MQ0=2;MQRankSum=4.152;QD=9.54;ReadPosRankSum=3.655;VQSLOD=2.4920;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:14,26:41:93.55:345,0,94	0/0:11,0:12:23.88:0,24,116	0/1:16,2:13:21.72:22,0,90	0/1:21,1:15:12.78:15,0,13	0/1:14,19:33:54.52:271,0,55	0/0:26,0:28:50.74:0,51,461	0/1:21,3:24:5.72:6,0,388	1/1:11,19:30:31.59:389,32,0	0/0:20,2:22:10.10:0,10,394	0/1:9,17:26:6.94:256,0,7	1/1:8,24:32:8.73:383,9,0	0/0:22,0:22:21.29:0,21,88	0/0:28,0:29:33.03:0,33,133	0/0:29,0:29:35.52:0,36,152	0/0:27,1:28:34.47:0,34,161	0/0:17,1:17:28.60:0,29,122	0/0:21,1:23:16.43:0,16,166	1/1:10,16:26:32.65:241,33,0	0/1:5,9:15:58.73:158,0,59	1/1:7,20:27:47.10:349,47,0	1/1:9,15:24:32.55:240,33,0	0/0:31,0:31:49.26:0,49,194	0/0:28,0:28:38.97:0,39,159	0/0:12,0:12:20.01:0,20,112	1/1:6,20:26:56.57:416,57,0	1/1:10,25:35:43.67:454,44,0	1/1:17,20:38:1.45:301,1,0	1/1:4,18:22:24.51:343,25,0
chr10	43984581	.	T	TGTG	7532.79	PASS	AB=0.709;AC=17;AF=0.304;AN=56;BaseQRankSum=-2.700;DP=691;FS=0.744;HRun=0;HaplotypeScore=146.9192;InbreedingCoeff=0.7619;MQ=64.90;MQ0=2;MQRankSum=-4.579;QD=32.19;ReadPosRankSum=2.479;VQSLOD=5.4702;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:87.14:0,87,1018	0/1:6,0:12:12.56:145,0,13	0/0:19,0:14:33.07:0,33,462	0/0:13,0:7:8.50:0,9,98	0/0:29,0:29:55.88:0,56,620	0/0:24,0:24:69.23:0,69,1155	0/0:22,0:22:34.71:0,35,791	0/0:37,0:37:44.68:0,45,952	0/0:18,0:18:54.15:0,54,886	0/0:28,0:28:66.12:0,66,790	0/0:32,0:32:65.32:0,65,1008	1/1:3,14:25:24:464,24,0	1/1:3,19:29:51.12:999,51,0	1/1:3,17:25:41.73:853,42,0	1/1:7,17:26:65.39:1274,65,0	1/1:9,14:22:62.43:1183,62,0	0/1:19,0:23:5.01:270,0,5	0/0:25,0:25:45.08:0,45,512	0/0:16,0:16:48.13:0,48,618	0/0:24,0:24:60.13:0,60,665	0/0:22,0:22:46.46:0,46,517	1/1:0,26:31:63.04:1240,63,0	1/1:2,22:27:26.09:933,26,0	0/1:5,0:12:23.55:173,0,24	0/0:24,0:24:64.38:0,64,653	0/0:31,0:31:15.96:0,16,710	0/0:35,0:35:75.95:0,76,869	0/0:20,0:20:57.14:0,57,623
chr10	43984614	.	T	TA	3896.78	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=1.653;DP=631;FS=0.821;HRun=6;HaplotypeScore=104.5338;InbreedingCoeff=0.9920;MQ=74.98;MQ0=0;MQRankSum=-5.021;QD=33.31;ReadPosRankSum=-2.124;VQSLOD=1.7432;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:69.15:0,69,704	1/1:0,9:9:27.09:339,27,0	0/0:22,0:20:45.05:0,45,437	0/0:10,0:7:12.01:0,12,116	0/0:21,0:21:63.13:0,63,636	0/0:27,0:27:78.17:0,78,795	0/0:16,0:16:45.09:0,45,452	1/1:6,35:41:99:1319,105,0	0/0:16,0:16:45.10:0,45,459	0/0:28,0:28:75.16:0,75,760	0/0:31,0:31:87.19:0,87,881	0/0:20,0:20:33.08:0,33,337	0/0:21,0:21:51.11:0,51,520	0/0:26,0:26:63.14:0,63,642	1/1:2,15:18:48.15:597,48,0	1/1:2,28:30:84.23:1038,84,0	1/1:4,15:19:48.15:604,48,0	0/0:19,0:19:48.10:0,48,489	0/0:21,0:21:51.11:0,51,520	0/0:19,0:19:54.09:0,54,541	0/0:18,0:18:45.10:0,45,459	0/0:23,0:23:66.14:0,66,667	0/0:27,0:27:69.13:0,69,691	0/0:11,0:11:23.70:0,24,244	0/0:28,0:28:75.16:0,75,765	0/0:28,0:28:78.18:0,78,796	0/0:34,0:34:93.21:0,93,949	0/0:20,0:20:60.14:0,60,612
chr10	43986311	.	T	TGC	4147.53	PASS	AB=0.615;AC=32;AF=0.571;AN=56;BaseQRankSum=-2.413;DP=511;FS=11.194;HRun=0;HaplotypeScore=75.6559;InbreedingCoeff=0.7961;MQ=67.87;MQ0=13;MQRankSum=-1.660;QD=13.21;ReadPosRankSum=2.263;VQSLOD=2.5974;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:29:68.07:464,68,0	1/1:11,0:11:22.81:162,23,0	0/0:16,0:10:7.32:0,7,125	0/0:32,0:12:32.63:0,33,311	1/1:26,0:26:56.59:452,57,0	0/0:18,0:17:44.89:0,45,366	1/1:14,0:14:29.82:221,30,0	0/0:34,0:34:83.65:0,84,753	0/0:16,0:16:41.73:0,42,350	1/1:20,0:19:41.89:408,42,0	0/1:4,11:15:10.71:55,0,11	0/0:9,0:9:23.96:0,24,197	0/0:0,0:14:5.68:0,6,28	0/0:11,0:10:23.96:0,24,198	1/1:6,13:22:5.23:61,5,0	1/1:16,0:16:35.72:267,36,0	1/1:17,0:17:19.55:175,20,0	1/1:15,0:15:29.06:219,29,0	1/1:16,0:16:32.76:245,33,0	1/1:20,0:20:35.55:257,36,0	1/1:12,0:12:17.75:118,18,0	0/0:16,0:16:44.81:0,45,358	0/0:13,0:13:38.91:0,39,315	0/0:0,0:18:5.68:0,6,28	0/1:8,9:17:27.37:45,0,27	1/1:21,0:21:21.72:304,22,0	1/1:20,0:20:53.03:346,53,0	1/1:23,0:20:51.81:350,52,0
chr10	43986961	.	TTTG	T	2040.36	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=8.277;DP=567;FS=37.620;HRun=0;HaplotypeScore=101.7263;InbreedingCoeff=0.9941;MQ=66.03;MQ0=5;MQRankSum=-2.635;QD=18.06;ReadPosRankSum=3.445;VQSLOD=1.7437;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:51.16:0,51,1010	0/0:10,0:10:21.05:0,21,392	0/0:44,0:29:52.98:0,53,919	0/0:58,0:42:83.86:0,84,1576	0/0:17,0:17:42.14:0,42,835	0/0:17,0:17:42.14:0,42,862	0/0:32,0:32:90.28:0,90,1803	0/0:23,0:23:45.09:0,45,809	0/0:26,0:26:72.11:0,72,1439	0/0:15,0:15:36.12:0,36,737	0/0:10,0:10:27.07:0,27,483	1/1:2,16:18:19.29:288,19,0	1/1:5,13:18:17.77:272,18,0	1/1:5,17:22:42.53:576,43,0	0/0:14,0:14:36.12:0,36,732	0/0:21,0:21:60.19:0,60,1211	0/0:15,0:15:36.12:0,36,749	0/0:14,0:14:24.08:0,24,479	0/0:24,0:24:63.17:0,63,1228	0/0:11,0:11:30.10:0,30,629	0/0:22,0:22:54.13:0,54,1065	1/1:1,15:15:41.88:481,42,0	1/1:1,10:11:20.90:215,21,0	1/1:3,25:27:27.09:395,27,0	0/0:13,0:13:36.12:0,36,708	0/0:23,0:23:57.19:0,57,1140	0/0:17,0:17:48.04:0,48,913	0/0:10,0:10:27.09:0,27,552
chr10	43986979	.	G	GGT	351.60	PASS	AB=0.989;AC=18;AF=0.375;AN=48;BaseQRankSum=1.467;DP=590;FS=1.045;HRun=0;HaplotypeScore=113.5311;InbreedingCoeff=0.5204;MQ=56.33;MQ0=35;MQRankSum=-0.494;QD=1.64;ReadPosRankSum=-1.230;VQSLOD=1.8620;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:25:18:0,18,119	1/1:7,0:7:2.97:20,3,0	./.	./.	0/0:21,0:18:14.91:0,15,120	0/1:23,0:20:12.03:12,0,51	0/1:31,0:30:3.26:3,0,118	1/1:14,0:16:2.92:17,3,0	0/0:31,0:30:20.91:0,21,161	0/0:15,0:14:5.83:0,6,38	./.	1/1:13,5:19:14.67:103,15,0	1/1:15,4:18:8.92:68,9,0	0/0:23,0:24:10.67:0,11,93	0/0:14,0:14:2.97:0,3,22	0/0:23,0:22:26.74:0,27,188	1/1:18,0:16:20.92:164,21,0	1/1:14,0:13:11.94:92,12,0	0/0:23,0:21:5.56:0,6,46	0/0:14,0:14:0.92:0,1,96	0/0:27,0:25:11.74:0,12,87	0/1:20,1:19:0:0,0,0	0/1:14,0:13:0:0,0,0	1/1:28,3:25:3:25,3,0	./.	0/0:23,0:20:5.65:0,6,29	0/0:17,0:17:6.86:0,7,154	0/0:9,0:8:8.17:0,8,49
chr10	43987254	.	C	CCTTCCTT	1438.29	PASS	AB=0.962;AC=17;AF=0.304;AN=56;BaseQRankSum=11.196;DP=527;FS=3.165;HRun=0;HaplotypeScore=161.4788;InbreedingCoeff=-0.3946;MQ=56.33;MQ0=1;MQRankSum=-3.993;QD=4.72;ReadPosRankSum=6.298;VQSLOD=1.9897;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:23.35:0,23,378	0/1:2,3:5:8.35:294,0,8	0/0:24,0:15:26.80:0,27,385	0/0:31,0:21:34.20:0,34,936	0/1:35,0:35:43.84:44,0,254	0/0:18,0:18:48.10:0,48,1030	0/0:16,0:16:45.14:0,45,1007	0/1:24,0:20:53.29:103,0,53	0/0:18,0:18:54.17:0,54,1236	0/1:24,0:24:99:133,0,123	0/1:7,2:9:33.81:221,0,34	0/1:18,0:18:12.85:13,0,117	0/1:25,0:24:25.02:25,0,80	0/1:26,0:24:1.83:2,0,313	0/0:23,0:23:1.22:0,1,729	0/0:13,0:13:32.31:0,32,442	0/1:22,0:21:71.65:358,0,72	0/0:11,0:11:13.89:0,14,183	0/1:16,0:16:40.12:40,0,94	0/1:15,0:15:34.05:34,0,104	0/1:25,0:25:11.19:11,0,50	0/1:11,0:11:1.94:2,0,113	0/1:6,0:6:2.91:3,0,50	0/0:16,0:15:7.69:0,8,107	0/1:14,1:15:51.84:270,0,52	0/0:21,0:21:23.80:0,24,350	0/1:18,0:17:15.35:15,0,185	0/1:10,0:10:20.36:20,0,40
chr10	43987264	.	T	TTTCC	11826.39	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=7.724;DP=524;FS=10.941;HRun=0;HaplotypeScore=98.6135;InbreedingCoeff=0.8657;MQ=56.94;MQ0=0;MQRankSum=-5.759;QD=28.29;ReadPosRankSum=4.260;VQSLOD=3.8095;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,18:28:12.04:306,12,0	1/1:3,2:4:11.93:233,12,0	0/0:23,0:16:36.01:0,36,529	0/0:27,0:20:40.58:0,41,678	1/1:5,28:33:66.18:1379,66,0	0/0:18,0:18:48.15:0,48,806	0/0:19,0:19:45.11:0,45,738	1/1:27,0:24:45.13:762,45,0	0/0:19,0:19:51.16:0,51,834	1/1:21,0:21:42.10:719,42,0	1/1:7,3:10:21.07:429,21,0	1/1:2,18:20:15.05:359,15,0	1/1:3,23:25:12.04:304,12,0	1/1:8,19:25:12.04:305,12,0	1/1:24,0:24:66.10:655,66,0	1/1:12,0:12:18.23:155,18,0	1/1:21,1:21:45.11:771,45,0	1/1:4,5:10:6.91:137,7,0	1/1:3,12:15:38.16:805,38,0	1/1:1,14:15:33.04:702,33,0	1/1:2,22:24:36.12:919,36,0	1/1:2,9:11:6.02:152,6,0	1/1:1,5:7:3.01:76,3,0	1/1:4,13:16:6.02:124,6,0	1/1:14,1:16:38.91:596,39,0	1/1:5,13:19:39.13:755,39,0	1/1:4,14:17:27.09:649,27,0	1/1:2,9:11:21.07:535,21,0
chr10	43987453	.	GATTTATTT	G	2793.94	PASS	AB=0.778;AC=30;AF=0.625;AN=48;BaseQRankSum=2.688;DP=339;FS=18.222;HRun=0;HaplotypeScore=131.3569;InbreedingCoeff=0.4438;MQ=48.19;MQ0=3;MQRankSum=-4.042;QD=12.76;ReadPosRankSum=1.727;VQSLOD=1.6902;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/1:3,0:6:7.60:123,0,8	./.	0/0:4,0:3:2.90:0,3,16	0/0:7,9:16:4.99:0,5,12	0/0:14,0:14:19.88:0,20,619	0/0:5,0:5:9.03:0,9,256	1/1:18,2:20:6:53,6,0	0/0:8,0:8:6.02:0,6,205	1/1:13,5:18:14.70:368,15,0	1/1:7,6:12:3.01:67,3,0	1/1:7,0:7:6.02:110,6,0	1/1:14,0:13:9.02:165,9,0	./.	1/1:7,0:13:15.05:297,15,0	1/1:4,0:6:6.02:136,6,0	0/1:7,0:8:5.32:126,0,5	1/1:11,1:11:3:25,3,0	1/1:10,3:11:2.96:19,3,0	1/1:8,8:16:0.03:66,0,0	./.	0/0:10,0:10:1.82:0,2,5	0/0:10,0:10:1.82:0,2,5	0/0:6,0:4:2.92:0,3,17	1/1:8,11:19:12.04:280,12,0	1/1:9,12:21:36.12:879,36,0	1/1:17,4:21:6.02:146,6,0	1/1:11,1:12:6.85:83,7,0
chr10	43987454	.	ATTTATTTAT	A	1600.14	PASS	AB=0.956;AC=19;AF=0.339;AN=56;BaseQRankSum=9.922;DP=335;FS=3.016;HRun=0;HaplotypeScore=139.7831;InbreedingCoeff=0.1953;MQ=48.03;MQ0=2;MQRankSum=-7.185;QD=9.30;ReadPosRankSum=1.324;VQSLOD=2.5125;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:16:42.05:0,42,548	0/1:6,0:6:87.26:87,0,125	0/0:6,0:4:9.03:0,9,115	0/0:4,0:3:6.02:0,6,87	0/0:16,0:16:43.38:0,43,549	0/0:13,0:13:30.10:0,30,1000	0/0:5,0:5:12.04:0,12,418	0/0:20,0:20:47.96:0,48,628	0/0:7,0:7:18.06:0,18,452	0/1:17,0:17:99:110,0,343	0/0:13,0:12:6.41:0,6,360	1/1:2,5:7:6.02:184,6,0	1/1:1,12:12:15.05:350,15,0	1/1:3,13:15:3.01:37,3,0	0/1:13,0:13:99:150,0,221	0/1:6,0:6:71.94:72,0,151	0/1:8,0:8:77.10:77,0,188	0/0:13,0:12:18.67:0,19,347	0/0:13,0:11:30.08:0,30,401	0/0:16,0:16:16.78:0,17,508	0/0:6,0:6:13.86:0,14,205	1/1:2,8:10:12.08:173,12,0	1/1:1,9:10:5.90:106,6,0	0/1:2,4:4:6.23:62,0,6	0/1:19,0:19:56.12:56,0,506	0/1:21,0:21:99:305,0,240	0/1:20,0:20:2.82:3,0,668	0/0:12,0:12:9.33:0,9,426
chr10	43987480	.	TTA	T	184.33	PASS	AB=0.912;AC=12;AF=0.222;AN=54;BaseQRankSum=6.282;DP=236;FS=10.292;HRun=0;HaplotypeScore=111.8312;InbreedingCoeff=0.3376;MQ=39.42;MQ0=5;MQRankSum=-4.118;QD=3.12;ReadPosRankSum=7.199;VQSLOD=0.7278;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:11:18.92:0,19,218	1/1:4,0:4:8.16:49,8,0	./.	0/0:10,0:2:5.44:0,5,24	0/0:15,0:15:29.23:0,29,295	0/0:11,0:11:25.60:0,26,461	0/0:3,0:3:9.03:0,9,170	0/0:10,0:10:27.04:0,27,325	0/0:4,0:4:12.03:0,12,181	0/1:11,0:11:6.32:6,0,149	0/0:10,0:10:21.26:0,21,250	0/0:2,0:2:5.19:0,5,20	0/0:10,0:8:16.81:0,17,130	0/0:7,0:6:3.89:0,4,31	0/1:9,2:11:23.85:91,0,24	0/1:3,1:4:19.76:20,0,34	1/1:2,1:3:8.89:59,9,0	0/0:9,0:8:9.37:0,9,186	0/0:7,0:4:11.99:0,12,122	0/0:13,0:13:30.90:0,31,389	0/0:3,0:3:0.89:0,1,17	0/0:4,0:4:6.02:0,6,76	0/0:5,0:5:9.02:0,9,96	1/1:5,0:3:2.74:12,3,0	0/0:22,0:22:27.65:0,28,384	0/1:18,0:18:33.98:34,0,129	0/0:10,0:10:7.81:0,8,148	1/1:1,0:3:7.25:60,7,0
chr10	43987503	.	TATC	T	82.04	PASS	AB=0.863;AC=10;AF=0.208;AN=48;BaseQRankSum=6.172;DP=196;FS=0.992;HRun=0;HaplotypeScore=122.8645;InbreedingCoeff=-0.0109;MQ=30.99;MQ0=6;MQRankSum=-2.820;QD=0.92;ReadPosRankSum=0.060;VQSLOD=2.0432;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:10,1:9:19.90:20,0,35	0/0:4,0:4:6.46:0,6,77	./.	0/0:9,0:1:0.89:0,1,2	1/1:10,3:13:0.31:30,0,0	0/0:11,0:11:30.10:0,30,542	0/0:3,0:3:6.02:0,6,113	0/0:4,0:4:12:0,12,134	0/0:4,0:4:12.04:0,12,260	0/0:8,1:9:4.75:0,5,212	0/1:8,1:9:11.05:11,0,49	0/0:2,0:2:6.02:0,6,78	0/0:8,0:6:9.03:0,9,117	1/1:2,1:2:2.98:22,3,0	0/0:11,0:11:12.79:0,13,203	0/0:6,0:6:12.04:0,12,154	0/0:5,0:4:6.93:0,7,51	0/0:4,0:3:9.03:0,9,117	0/0:6,1:3:9.03:0,9,117	0/1:9,1:10:12.59:13,0,102	./.	0/0:3,0:3:5.97:0,6,57	./.	./.	0/1:13,4:17:55.23:55,0,162	0/1:16,3:19:30.14:30,0,382	0/1:5,2:7:25.19:25,0,102	0/0:1,0:1:3.01:0,3,39
chr10	43987516	.	A	ATT	4582.87	PASS	AB=0.967;AC=32;AF=0.615;AN=52;BaseQRankSum=8.770;DP=238;FS=11.643;HRun=1;HaplotypeScore=191.8870;InbreedingCoeff=-0.2587;MQ=30.39;MQ0=5;MQRankSum=-3.179;QD=21.42;ReadPosRankSum=-3.430;VQSLOD=0.9357;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:12,0:10:13.23:113,0,13	1/1:6,0:6:2.96:139,3,0	./.	./.	1/1:19,1:20:41.24:541,41,0	0/0:8,0:8:21.07:0,21,321	0/0:2,0:2:6.02:0,6,92	1/1:5,0:2:6.02:96,6,0	0/0:6,0:6:18.05:0,18,253	0/1:14,2:16:83.51:438,0,84	1/1:9,1:10:18.03:304,18,0	0/1:6,0:4:4.75:99,0,5	0/1:10,0:8:41.15:98,0,41	1/1:8,0:6:15.05:259,15,0	0/1:12,0:11:63.13:219,0,63	0/1:11,0:11:28.73:331,0,29	0/1:5,0:4:20.45:128,0,20	0/1:5,0:5:28.95:29,0,118	0/1:10,0:7:24.62:252,0,25	0/1:9,0:9:65.50:86,0,66	1/1:1,0:1:2.68:11,3,0	0/1:4,1:5:35.80:67,0,36	1/1:2,1:3:3.01:52,3,0	1/1:3,0:2:3.01:52,3,0	0/1:23,0:23:31.27:432,0,31	0/1:19,1:20:99:359,0,322	0/1:10,2:12:52.93:423,0,53	1/1:2,0:2:2.02:55,2,0
chr10	43987561	.	A	ATT	10458.79	PASS	AB=0.980;AC=47;AF=0.839;AN=56;BaseQRankSum=6.789;DP=382;FS=10.306;HRun=3;HaplotypeScore=193.9049;InbreedingCoeff=0.7646;MQ=56.44;MQ0=10;MQRankSum=-7.017;QD=33.85;ReadPosRankSum=2.918;VQSLOD=3.2733;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,10:10:26.39:312,26,0	1/1:1,5:5:15.05:252,15,0	0/0:47,0:19:37.74:0,38,507	0/1:48,0:13:26.26:26,0,129	1/1:0,28:28:62.91:916,63,0	0/0:7,0:7:21.07:0,21,321	0/0:9,0:9:24.07:0,24,346	1/1:6,8:10:24.05:360,24,0	0/0:8,0:8:24.08:0,24,356	1/1:1,14:15:45.15:747,45,0	1/1:0,11:11:24.77:446,25,0	1/1:1,9:8:24.05:389,24,0	1/1:0,7:6:18.05:301,18,0	1/1:2,10:11:33.07:507,33,0	1/1:0,14:13:35.50:607,36,0	1/1:0,12:12:36.12:604,36,0	1/1:0,6:5:14.61:187,15,0	1/1:0,3:3:9.03:168,9,0	1/1:2,13:14:39.13:692,39,0	1/1:1,6:7:10.79:89,11,0	1/1:1,2:3:9.03:136,9,0	1/1:0,8:8:24.08:367,24,0	1/1:0,9:9:24.08:408,24,0	1/1:0,9:9:6.20:98,6,0	1/1:0,20:20:60.20:971,60,0	1/1:0,18:18:54.18:924,54,0	1/1:2,18:18:53.68:892,54,0	1/1:1,1:2:3.48:57,3,0
chr10	43987566	.	TGG	T	3798.85	PASS	AB=1.000;AC=45;AF=0.804;AN=56;BaseQRankSum=8.892;DP=410;FS=12.243;HRun=4;HaplotypeScore=218.2528;InbreedingCoeff=0.7478;MQ=56.22;MQ0=17;MQRankSum=-7.606;QD=14.39;ReadPosRankSum=4.716;VQSLOD=-0.7105;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,2:10:18.27:118,18,0	1/1:4,0:5:14.70:88,15,0	0/0:60,0:19:41.99:0,42,527	0/0:53,0:15:10.77:0,11,275	1/1:23,5:28:64.75:362,65,0	0/0:12,0:12:27.09:0,27,437	0/0:10,0:10:21.07:0,21,344	1/1:7,5:9:17.92:138,18,0	0/0:9,0:9:23.97:0,24,399	1/1:9,5:15:41.77:317,42,0	1/1:9,2:11:31.97:189,32,0	1/1:8,1:8:23.29:134,23,0	1/1:6,1:6:4.50:61,4,0	1/1:10,1:11:27.58:141,28,0	1/1:12,0:14:38.01:238,38,0	1/1:9,0:12:34.47:206,34,0	1/1:4,0:5:6.32:41,6,0	1/1:6,0:4:5.95:45,6,0	1/1:12,4:14:35.73:279,36,0	1/1:5,2:7:14.14:71,14,0	1/1:2,0:2:5.86:38,6,0	1/1:7,1:8:16.90:99,17,0	1/1:8,1:9:23.17:128,23,0	1/1:8,1:9:1.37:66,1,0	1/1:14,6:20:58.39:342,58,0	1/1:13,5:18:53.17:350,53,0	1/1:15,5:19:51.69:334,52,0	0/1:3,0:3:11.30:11,0,23
chr10	43987567	.	G	GTTTTTT	4918.43	PASS	AB=1.000;AC=31;AF=0.554;AN=56;BaseQRankSum=5.345;DP=415;FS=3.924;HRun=3;HaplotypeScore=232.3511;InbreedingCoeff=-0.0428;MQ=56.09;MQ0=18;MQRankSum=-5.643;QD=18.70;ReadPosRankSum=-2.166;VQSLOD=0.4147;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:12,0:10:2.30:142,0,2	1/1:5,1:5:14.81:212,15,0	0/0:63,0:20:34.75:0,35,738	0/0:55,0:15:19.69:0,20,296	0/1:28,0:28:6.50:408,0,7	0/0:13,0:13:27.01:0,27,566	0/0:12,0:12:21.07:0,21,524	0/1:12,0:9:9.71:10,0,42	0/0:9,0:9:24.08:0,24,568	0/1:15,0:15:59.38:78,0,59	0/1:11,0:11:22.60:206,0,23	1/1:10,0:8:5.66:266,6,0	0/1:7,0:6:37.95:81,0,38	0/1:12,0:11:41.32:290,0,41	1/1:12,3:14:38.65:561,39,0	1/1:10,2:12:35.85:494,36,0	1/1:2,2:3:6.47:117,6,0	0/1:6,0:4:9.36:47,0,9	0/1:16,0:14:15.27:148,0,15	0/1:7,0:7:3.30:139,0,3	1/1:2,0:2:5.94:41,6,0	0/1:8,0:8:8.94:272,0,9	1/1:9,0:9:7.43:195,7,0	0/1:9,0:9:0.73:160,0,1	0/1:20,0:20:54.49:490,0,54	0/1:18,0:18:99:237,0,107	0/1:20,0:18:73.47:290,0,73	1/1:4,0:4:4.95:35,5,0
chr10	43987568	.	G	GTTTT	8491.17	PASS	AB=1.000;AC=45;AF=0.804;AN=56;BaseQRankSum=9.034;DP=415;FS=7.751;HRun=0;HaplotypeScore=210.6971;InbreedingCoeff=0.8073;MQ=58.80;MQ0=18;MQRankSum=-8.009;QD=32.66;ReadPosRankSum=4.292;VQSLOD=3.9157;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,0:10:29.50:269,29,0	1/1:5,0:5:14.84:191,15,0	0/0:66,0:22:37.08:0,37,685	0/0:55,0:15:16.82:0,17,297	1/1:20,0:27:76.47:667,76,0	0/0:13,0:13:27.09:0,27,517	0/0:12,0:12:24.07:0,24,464	1/1:12,0:9:14.78:127,15,0	0/0:9,0:9:24.08:0,24,503	1/1:13,1:14:42.04:521,42,0	1/1:8,4:12:32.85:452,33,0	1/1:5,5:8:24.07:447,24,0	1/1:4,3:6:10.69:227,11,0	1/1:6,6:11:27.94:505,28,0	1/1:12,0:14:38:494,38,0	1/1:10,0:12:35.87:449,36,0	1/1:2,0:3:6.45:93,6,0	1/1:5,0:3:6:63,6,0	1/1:13,0:13:36.06:497,36,0	1/1:3,0:7:16.93:84,17,0	1/1:2,0:2:5.99:60,6,0	1/1:2,6:8:23.99:417,24,0	1/1:6,3:9:24.04:342,24,0	1/1:4,4:8:18.69:230,19,0	1/1:12,9:21:59.75:904,60,0	1/1:13,2:18:51.42:672,51,0	1/1:14,0:18:53.49:727,53,0	0/1:4,0:4:16.39:54,0,16
chr10	43987569	.	G	GTTTTTT	6954.91	PASS	AB=1.000;AC=44;AF=0.786;AN=56;BaseQRankSum=7.465;DP=426;FS=2.226;HRun=0;HaplotypeScore=232.1584;InbreedingCoeff=0.6821;MQ=58.18;MQ0=18;MQRankSum=-8.515;QD=25.66;ReadPosRankSum=5.956;VQSLOD=4.2328;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,3:10:25.65:224,26,0	1/1:6,0:5:15.05:285,15,0	0/0:65,0:21:42.34:0,42,452	0/0:55,0:14:7.78:0,8,202	1/1:20,7:27:61.35:464,61,0	0/0:14,0:14:30.09:0,30,541	0/0:12,0:12:26.98:0,27,467	0/1:12,0:9:5.56:31,0,6	0/0:9,0:9:24.07:0,24,383	1/1:14,0:14:29.67:216,30,0	1/1:12,0:12:24.34:281,24,0	1/1:10,0:8:22.72:316,23,0	1/1:8,0:6:2.92:138,3,0	1/1:14,0:11:24.98:371,25,0	1/1:15,0:14:39.09:724,39,0	1/1:12,0:12:36.12:681,36,0	1/1:4,0:3:8.70:143,9,0	1/1:5,0:3:3.73:17,4,0	1/1:14,2:14:33.02:356,33,0	1/1:3,4:7:11.95:129,12,0	1/1:2,0:2:2.54:27,3,0	1/1:9,0:9:23.26:406,23,0	1/1:9,0:9:22.64:225,23,0	1/1:9,0:9:20.82:187,21,0	1/1:22,0:21:39.14:624,39,0	1/1:16,3:19:34.83:456,35,0	1/1:17,6:21:41.87:611,42,0	0/1:4,0:4:20.20:40,0,20
chr10	43987573	.	T	TG	4010.84	PASS	AB=0.955;AC=44;AF=0.786;AN=56;BaseQRankSum=4.051;DP=573;FS=15.384;HRun=0;HaplotypeScore=259.5262;InbreedingCoeff=0.7138;MQ=53.30;MQ0=28;MQRankSum=-6.884;QD=9.83;ReadPosRankSum=7.585;VQSLOD=2.3787;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:18,4:18:31.24:210,31,0	1/1:8,2:9:15.04:126,15,0	0/0:69,0:20:36.50:0,36,311	0/0:59,0:14:22.95:0,23,182	1/1:27,14:41:34.72:241,35,0	0/0:14,0:14:30.47:0,30,296	0/0:13,0:13:29.39:0,29,251	0/1:18,0:13:39.21:45,0,39	0/0:10,0:10:29.90:0,30,249	1/1:16,1:16:36.60:202,37,0	1/1:17,0:17:29.04:170,29,0	1/1:12,1:11:28.70:161,29,0	1/1:11,0:9:16.67:92,17,0	1/1:17,0:14:13.10:181,13,0	1/1:11,8:18:26.39:221,26,0	1/1:14,7:20:42.35:274,42,0	1/1:9,0:8:8.11:70,8,0	1/1:10,2:9:5.67:87,6,0	1/1:14,5:17:21.63:237,22,0	1/1:22,1:23:18.16:171,18,0	1/1:3,1:4:7.46:43,7,0	1/1:12,0:12:20.33:153,20,0	1/1:13,0:13:31.78:179,32,0	1/1:15,0:15:6.63:63,7,0	1/1:28,0:27:51.27:335,51,0	1/1:19,8:26:40.95:377,41,0	1/1:24,6:28:20.28:318,20,0	0/1:9,1:9:23.91:55,0,24
chr10	43987576	.	T	TG	180.20	PASS	AB=0.830;AC=14;AF=0.250;AN=56;BaseQRankSum=10.114;DP=587;FS=16.864;HRun=0;HaplotypeScore=267.9457;InbreedingCoeff=-0.3485;MQ=52.77;MQ0=31;MQRankSum=-5.225;QD=0.54;ReadPosRankSum=5.791;VQSLOD=0.9878;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:19,3:18:38.96:39,0,103	0/0:11,1:11:3.39:0,3,61	0/0:73,0:20:27.97:0,28,239	0/1:61,0:13:19.53:20,0,72	0/1:35,7:42:39.10:39,0,285	0/0:14,0:14:29.45:0,29,277	0/0:13,0:13:29.40:0,29,254	0/0:16,0:11:13.73:0,14,100	0/0:9,0:9:26.94:0,27,228	0/0:16,1:16:8.60:0,9,109	0/0:13,4:17:8.27:0,8,114	0/1:8,5:11:19.21:23,0,19	0/0:8,3:9:17.15:0,17,97	0/1:11,6:14:5.73:6,0,86	0/1:16,3:18:32.18:46,0,32	0/1:20,2:21:5.87:6,0,108	0/1:8,2:9:5.77:6,0,56	0/0:14,0:11:23.74:0,24,111	0/1:18,2:17:17.06:17,0,84	0/1:19,4:23:25.18:25,0,172	0/0:4,0:4:7.05:0,7,30	0/1:5,7:12:9.55:10,0,50	0/0:10,3:13:17.93:0,18,108	0/1:10,5:15:4.47:4,0,33	0/0:19,9:27:1.28:0,1,177	0/1:23,5:27:34.09:34,0,161	0/1:24,6:28:49.26:49,0,157	0/0:9,1:9:3.22:0,3,113
chr10	43987582	.	T	TG	1118.16	PASS	AB=0.853;AC=22;AF=0.393;AN=56;BaseQRankSum=8.302;DP=600;FS=1.388;HRun=0;HaplotypeScore=259.7075;InbreedingCoeff=-0.3421;MQ=50.59;MQ0=33;MQRankSum=-5.536;QD=2.92;ReadPosRankSum=-0.609;VQSLOD=2.7442;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:21,3:20:16.22:16,0,101	0/1:11,1:11:15.52:16,0,55	0/0:73,0:18:20.94:0,21,201	0/0:62,0:13:12.30:0,12,140	0/1:34,7:41:99:199,0,124	0/0:12,0:12:24.50:0,24,251	0/0:13,0:13:29.31:0,29,246	0/1:18,0:13:24.50:24,0,77	0/0:8,0:8:23.95:0,24,200	1/1:18,1:18:15.64:180,16,0	0/1:13,4:17:48.65:49,0,74	1/1:10,4:12:2.76:72,3,0	0/1:8,3:9:23.17:25,0,23	0/1:12,6:15:55.68:61,0,56	0/1:16,3:18:28.66:56,0,29	0/1:20,2:21:80.53:95,0,81	0/0:9,2:10:4.27:0,4,88	0/1:14,0:11:0.06:0,0,74	0/1:17,2:16:9.18:88,0,9	0/0:20,4:24:14.69:0,15,207	0/1:6,0:6:1.26:1,0,33	0/1:6,7:13:32.54:33,0,54	0/1:10,3:13:41.75:42,0,51	0/1:10,5:15:20.97:21,0,39	0/1:16,9:24:44.29:44,0,114	0/1:26,5:30:62.02:123,0,62	0/1:26,6:30:98.04:134,0,98	0/0:13,1:13:17.27:0,17,154
chr10	43987593	.	T	TTG	7672.95	PASS	AB=1.000;AC=47;AF=0.839;AN=56;BaseQRankSum=4.444;DP=518;FS=1.795;HRun=0;HaplotypeScore=218.5499;InbreedingCoeff=0.8131;MQ=50.89;MQ0=26;MQRankSum=-5.331;QD=17.40;ReadPosRankSum=3.153;VQSLOD=5.0572;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:27,3:27:66.71:502,67,0	1/1:9,1:10:28.75:214,29,0	0/0:49,0:11:20.58:0,21,137	0/1:43,0:11:14.77:15,0,49	1/1:31,6:39:91.34:617,91,0	0/0:10,0:10:20.70:0,21,188	0/0:13,0:13:5.06:0,5,159	1/1:18,0:14:29.76:223,30,0	0/0:5,0:5:8.44:0,8,71	1/1:10,1:10:23.97:223,24,0	1/1:5,4:11:26.73:211,27,0	1/1:8,4:11:28.17:241,28,0	1/1:6,3:8:23.34:189,23,0	1/1:7,5:11:31:262,31,0	1/1:15,3:17:45.49:359,45,0	1/1:20,2:21:60.47:427,60,0	1/1:10,2:11:29.62:217,30,0	1/1:13,0:10:29:188,29,0	1/1:12,1:12:31.25:221,31,0	1/1:20,2:25:61.76:478,62,0	1/1:12,0:12:31.02:223,31,0	1/1:8,5:14:41.78:357,42,0	1/1:6,3:9:26.74:226,27,0	1/1:9,4:13:31.76:208,32,0	1/1:10,8:19:56.68:532,57,0	1/1:26,5:31:85.83:691,86,0	1/1:21,5:26:74.34:556,74,0	1/1:14,0:14:37.73:295,38,0
chr10	43988466	.	GCTC	G	19633.38	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=8.434;DP=617;FS=1.406;HRun=0;HaplotypeScore=108.8507;InbreedingCoeff=0.9924;MQ=73.85;MQ0=0;MQRankSum=-5.161;QD=37.90;ReadPosRankSum=2.184;VQSLOD=5.8081;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,34:43:99:1707,114,0	1/1:3,5:8:12.04:190,12,0	0/0:20,0:20:54.19:0,54,1135	0/0:25,0:22:54.18:0,54,1103	1/1:2,13:15:29.78:475,30,0	0/0:21,0:21:60.16:0,60,1265	0/0:16,0:16:45.14:0,45,940	1/1:4,16:20:48.15:738,48,0	0/0:17,0:17:51.16:0,51,1073	1/1:3,9:12:33.11:523,33,0	1/1:2,12:15:33.11:512,33,0	1/1:8,16:24:60.20:936,60,0	1/1:1,16:17:42.14:665,42,0	1/1:0,22:22:66.22:1046,66,0	1/1:3,13:16:33.11:523,33,0	1/1:0,18:18:54.18:856,54,0	1/1:1,31:32:78.27:1236,78,0	1/1:3,21:24:69.23:1093,69,0	1/1:6,17:23:48.09:709,48,0	1/1:4,19:23:48.16:760,48,0	1/1:3,46:49:99:1543,99,0	1/1:2,20:22:48.16:759,48,0	1/1:3,13:16:30.10:475,30,0	1/1:2,25:27:75.17:1156,75,0	1/1:3,16:19:48.16:760,48,0	1/1:5,28:33:90.29:1385,90,0	1/1:3,22:25:63.21:998,63,0	1/1:4,11:15:39.11:588,39,0
chr10	43988559	.	CT	C	19657.54	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=7.936;DP=628;FS=17.325;HRun=1;HaplotypeScore=77.3145;InbreedingCoeff=0.9983;MQ=65.38;MQ0=0;MQRankSum=-0.695;QD=37.88;ReadPosRankSum=3.076;VQSLOD=3.3739;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,35:35:99:1380,99,0	1/1:0,12:12:33.58:461,34,0	0/0:14,0:14:23.86:0,24,534	0/0:20,0:18:28.49:0,28,520	1/1:0,26:26:66.14:876,66,0	0/0:28,0:28:78.22:0,78,1175	0/0:30,0:30:90.24:0,90,1322	1/1:0,19:19:57.09:733,57,0	0/0:17,0:17:51.16:0,51,792	1/1:0,22:22:66.21:900,66,0	1/1:0,8:8:21.07:293,21,0	1/1:1,22:23:63.20:861,63,0	1/1:0,15:15:45.15:627,45,0	1/1:0,18:18:48.16:670,48,0	1/1:0,24:24:66.22:921,66,0	1/1:0,26:26:75.25:1047,75,0	1/1:0,31:31:90.30:1255,90,0	1/1:0,28:28:78.26:1087,78,0	1/1:0,29:28:81.27:1127,81,0	1/1:0,19:19:50.87:632,51,0	1/1:6,25:31:84.22:1130,84,0	1/1:0,16:16:42.14:580,42,0	1/1:0,15:15:42.14:586,42,0	1/1:0,33:33:81.10:1099,81,0	1/1:0,22:22:63.21:879,63,0	1/1:0,24:24:69.14:934,69,0	1/1:0,27:27:72.09:1003,72,0	1/1:1,15:16:42.14:578,42,0
chr10	43988848	.	TG	T	10564.10	PASS	AB=0.554;AC=25;AF=0.446;AN=56;BaseQRankSum=13.272;DP=693;FS=2.394;HRun=3;HaplotypeScore=70.6434;InbreedingCoeff=0.9269;MQ=61.99;MQ0=1;MQRankSum=-1.298;QD=32.71;ReadPosRankSum=5.167;VQSLOD=5.1466;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,45:45:99:1525,123,0	1/1:0,9:9:24.08:297,24,0	0/0:36,0:28:81.17:0,81,1065	0/0:38,0:32:78.99:0,79,1074	1/1:2,30:32:84.26:1041,84,0	0/0:21,0:21:63.20:0,63,889	0/0:19,0:19:57.19:0,57,819	0/0:34,0:34:93.30:0,93,1323	0/0:22,0:22:63.21:0,63,907	0/0:16,0:16:48.16:0,48,691	0/0:17,0:17:45.13:0,45,628	0/0:23,0:23:63.20:0,63,889	0/0:27,0:27:78.26:0,78,1123	0/0:26,0:26:75.24:0,75,1062	1/1:0,30:30:87.27:1079,87,0	1/1:1,30:31:84.26:1042,84,0	1/1:0,27:27:69.22:855,69,0	1/1:1,20:21:57.18:706,57,0	1/1:3,20:21:57.18:706,57,0	1/1:0,17:17:51.16:630,51,0	1/1:3,24:27:72.23:893,72,0	0/0:24,0:24:69.22:0,69,960	0/0:16,0:16:48.15:0,48,673	0/0:31,0:31:93.31:0,93,1339	0/0:19,0:19:57.19:0,57,817	0/1:6,25:31:99:824,0,165	1/1:1,22:23:57.18:706,57,0	1/1:0,7:7:21.07:260,21,0
chr10	43989287	.	C	CA	5152.13	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-12.226;DP=704;FS=9.122;HRun=6;HaplotypeScore=99.6183;InbreedingCoeff=0.9965;MQ=82.50;MQ0=0;MQRankSum=-0.996;QD=31.23;ReadPosRankSum=3.451;VQSLOD=4.4435;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:57:99:0,153,1542	0/0:6,0:6:18.04:0,18,184	0/0:24,0:24:56.90:0,57,557	0/0:21,0:21:50.47:0,50,502	0/0:20,0:20:51.11:0,51,520	0/0:24,0:24:60.10:0,60,598	0/0:22,0:22:57.12:0,57,581	0/0:26,0:26:72.16:0,72,734	0/0:31,0:31:81.16:0,81,820	0/0:27,0:27:72.14:0,72,722	0/0:10,0:10:27.06:0,27,275	1/1:1,26:27:69.22:868,69,0	1/1:1,25:26:75.24:943,75,0	1/1:5,23:28:60.19:755,60,0	0/0:30,0:30:87.17:0,87,873	0/0:22,0:22:57.10:0,57,569	0/0:39,0:39:99:0,111,1125	0/0:23,0:23:57.13:0,57,581	0/0:15,0:15:45.10:0,45,458	0/0:23,0:23:60.13:0,60,612	0/0:33,0:33:90.14:0,90,894	1/1:2,15:18:39.08:473,39,0	1/1:0,24:24:66.02:830,66,0	1/1:4,38:42:99:1283,102,0	0/0:21,0:21:60.13:0,60,611	0/0:30,0:30:81.17:0,81,821	0/0:28,0:28:78.17:0,78,794	0/0:7,0:7:18.04:0,18,183
chr10	43989330	.	ACT	A	12682.72	PASS	AB=0.532;AC=25;AF=0.446;AN=56;BaseQRankSum=4.405;DP=702;FS=0.000;HRun=0;HaplotypeScore=123.3829;InbreedingCoeff=0.9185;MQ=87.67;MQ0=0;MQRankSum=-1.788;QD=38.90;ReadPosRankSum=4.260;VQSLOD=6.7970;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,52:54:99:2163,147,0	1/1:0,4:4:9.03:131,9,0	0/0:30,0:29:84.07:0,84,1408	0/0:20,0:20:48.12:0,48,812	1/1:1,27:28:75.25:1104,75,0	0/0:23,0:23:66.23:0,66,1235	0/0:26,0:26:78.27:0,78,1456	0/0:26,0:26:78.27:0,78,1448	0/0:28,0:28:81.28:0,81,1509	0/0:21,0:21:60.21:0,60,1123	0/0:21,0:21:63.20:0,63,1128	0/0:27,0:27:75.26:0,75,1390	0/0:21,0:21:57.18:0,57,1035	0/0:27,0:27:75.20:0,75,1271	1/1:1,28:29:75.25:1104,75,0	1/1:1,15:16:42.10:577,42,0	1/1:2,34:36:90.30:1325,90,0	1/1:0,26:26:69.23:1016,69,0	1/1:0,15:15:45.09:586,45,0	1/1:2,21:23:60.20:876,60,0	1/1:1,36:37:99:1546,105,0	0/0:29,0:29:84.27:0,84,1528	0/0:18,0:18:51.15:0,51,922	0/0:35,0:34:96.29:0,96,1690	0/0:24,0:24:66.23:0,66,1216	0/1:3,22:25:37.32:848,0,37	1/1:0,27:27:78.26:1146,78,0	1/1:0,6:6:18.06:260,18,0
chr10	43989460	.	ATGCACAGCCG	A	4371.98	PASS	AB=0.909;AC=9;AF=0.161;AN=56;BaseQRankSum=10.652;DP=629;FS=1.096;HRun=0;HaplotypeScore=190.9423;InbreedingCoeff=0.8653;MQ=90.99;MQ0=0;MQRankSum=-9.598;QD=41.25;ReadPosRankSum=-1.792;VQSLOD=3.9444;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,123,6193	0/0:7,0:7:21.07:0,21,1081	0/0:28,0:28:60.08:0,60,2072	0/0:28,0:28:60.12:0,60,2181	0/0:20,0:20:60.21:0,60,2851	0/0:11,0:11:24.08:0,24,1236	0/0:31,0:31:81.25:0,81,3821	1/1:8,14:22:42:827,42,0	0/0:26,0:26:72.23:0,72,3394	1/1:7,16:23:42.08:1124,42,0	1/1:0,18:18:33.11:1038,33,0	0/0:10,0:10:27.08:0,27,1261	0/0:11,0:11:24.08:0,24,1224	0/0:27,0:27:75.24:0,75,3680	0/0:24,0:24:57.20:0,57,2774	0/0:19,0:19:42.13:0,42,1954	0/0:37,0:37:99:0,99,4735	0/0:20,0:20:48.16:0,48,2472	0/0:21,0:21:48.15:0,48,1949	0/0:18,0:18:45.14:0,45,2065	0/0:46,0:46:99:0,123,5970	0/0:16,0:16:36.11:0,36,1629	0/0:21,0:21:57.18:0,57,2584	0/0:29,0:29:78.27:0,78,3764	1/1:1,22:23:45.10:1340,45,0	0/1:18,2:20:43.27:43,0,2165	0/0:19,0:19:54.19:0,54,2742	0/0:11,0:11:30.10:0,30,1514
chr10	43990283	.	GTC	G	4316.16	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=6.968;DP=568;FS=2.944;HRun=0;HaplotypeScore=134.3067;InbreedingCoeff=0.9977;MQ=78.15;MQ0=0;MQRankSum=-1.356;QD=35.09;ReadPosRankSum=3.423;VQSLOD=6.9052;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:95.93:0,96,1632	0/0:10,0:10:30.10:0,30,538	0/0:17,0:17:40.11:0,40,669	0/0:21,0:20:55.67:0,56,874	0/0:13,0:13:33.11:0,33,597	0/0:18,0:18:54.19:0,54,990	0/0:27,0:27:75.24:0,75,1342	0/0:18,0:18:42.14:0,42,743	0/0:23,0:23:66.21:0,66,1172	0/0:25,0:25:66.21:0,66,1154	0/0:9,0:9:27.09:0,27,494	1/1:0,24:24:54.17:773,54,0	1/1:1,13:14:29.97:429,30,0	1/1:0,19:19:54.18:773,54,0	0/0:20,0:20:57.18:0,57,1008	0/0:21,0:21:63.16:0,63,1061	0/0:36,0:36:99:0,105,1845	0/0:13,0:13:39.13:0,39,697	0/0:15,0:15:42.12:0,42,711	0/0:15,0:15:42.13:0,42,740	0/0:39,0:39:99:0,108,1907	1/1:0,13:13:36.12:515,36,0	1/1:0,14:14:30.10:428,30,0	1/1:0,39:39:99:1398,99,0	0/0:22,0:22:60.21:0,60,1093	0/0:15,0:15:39.13:0,39,714	0/0:25,0:25:75.26:0,75,1363	0/0:6,0:6:18.06:0,18,325
chr10	43991822	.	A	ACTCACATGT	15175.79	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-13.331;DP=728;FS=4.004;HRun=0;HaplotypeScore=182.6591;InbreedingCoeff=0.9931;MQ=85.59;MQ0=0;MQRankSum=-13.221;QD=64.85;ReadPosRankSum=-1.019;VQSLOD=4.6689;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,19:37:32.99:1509,33,0	0/0:9,0:9:18.06:0,18,517	0/0:27,0:27:50.98:0,51,1092	0/0:29,0:29:56.14:0,56,1219	1/1:6,22:35:30.10:1369,30,0	0/0:31,0:31:66.21:0,66,1788	0/0:33,0:33:72.25:0,72,2020	0/0:24,0:23:60.19:0,60,1481	0/0:36,0:36:96.32:0,96,2652	0/0:25,0:24:63.21:0,63,1651	0/0:15,0:15:42.13:0,42,1144	0/0:24,0:24:66.21:0,66,1814	0/0:25,0:25:66.20:0,66,1733	0/0:26,0:26:66.23:0,66,1894	0/0:38,0:38:99:0,108,2856	0/0:27,0:27:72.22:0,72,1852	0/0:24,0:24:60.21:0,60,1685	0/0:17,0:17:42.12:0,42,1090	1/1:8,19:38:90.31:3656,90,0	1/1:2,20:25:39.13:1806,39,0	1/1:6,17:27:27.09:1190,27,0	0/0:27,0:27:72.19:0,72,1803	0/0:16,0:15:36.10:0,36,962	0/0:24,0:24:63.20:0,63,1688	0/0:17,0:17:36.10:0,36,878	1/1:5,20:32:77.90:3411,78,0	1/1:4,18:30:35.76:1676,36,0	1/1:4,4:8:12.04:559,12,0
chr10	43992307	.	C	CAACAA	2649.21	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=7.521;DP=470;FS=2.927;HRun=0;HaplotypeScore=102.2341;InbreedingCoeff=0.8539;MQ=61.59;MQ0=4;MQRankSum=-7.999;QD=24.53;ReadPosRankSum=-2.046;VQSLOD=2.8122;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:90.29:0,90,1611	1/1:3,5:8:9.03:256,9,0	0/1:17,0:11:9.56:10,0,46	0/0:15,0:6:2.54:0,3,9	0/0:11,0:11:30.09:0,30,509	0/0:20,0:20:42.12:0,42,716	0/0:27,0:27:48.12:0,48,794	1/1:5,0:7:15.03:167,15,0	0/0:13,0:13:27.09:0,27,494	1/1:9,10:18:30.06:711,30,0	1/1:5,10:14:24.08:629,24,0	0/0:11,0:11:24.08:0,24,444	0/0:8,0:8:18.06:0,18,331	0/0:19,0:19:39.13:0,39,719	0/0:8,0:8:18.01:0,18,257	0/0:7,0:7:21.05:0,21,321	1/1:22,8:26:28.50:636,29,0	0/0:26,0:26:69.20:0,69,1239	0/0:16,0:15:30.10:0,30,563	0/0:14,0:14:33.11:0,33,619	0/0:23,0:23:51.13:0,51,882	0/0:7,0:7:18.05:0,18,303	0/0:21,0:21:45.14:0,45,806	0/0:31,0:31:72.25:0,72,1346	1/1:3,6:8:15.05:424,15,0	0/0:15,0:14:24.08:0,24,446	0/0:21,0:20:45.15:0,45,838	0/0:14,0:14:39.13:0,39,701
chr10	43992405	.	CA	C	3990.44	PASS	AB=0.611;AC=43;AF=0.768;AN=56;BaseQRankSum=3.461;DP=439;FS=6.300;HRun=12;HaplotypeScore=49.0405;InbreedingCoeff=0.6442;MQ=54.90;MQ0=37;MQRankSum=0.219;QD=11.53;ReadPosRankSum=1.463;VQSLOD=2.8761;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,31:30:59.70:459,60,0	1/1:1,0:4:6.29:19,6,0	0/0:24,0:2:6.01:0,6,64	0/0:13,1:4:2.75:0,3,21	1/1:5,17:22:16.43:300,16,0	0/0:10,1:11:3.82:0,4,220	0/0:22,0:17:30:0,30,291	1/1:9,7:5:14.94:114,15,0	0/0:19,0:19:12.92:0,13,308	1/1:2,0:7:10.18:29,10,0	1/1:4,2:8:9.08:41,9,0	1/1:2,15:17:5.41:225,5,0	1/1:0,10:11:25.95:192,26,0	1/1:2,9:12:17.93:139,18,0	1/1:0,9:9:17.93:139,18,0	0/1:4,7:11:39.96:95,0,40	1/1:4,0:35:12.10:96,12,0	1/1:0,17:17:32.87:255,33,0	1/1:6,12:15:28.52:244,29,0	1/1:0,7:7:17.93:139,18,0	1/1:4,9:11:11.95:93,12,0	1/1:1,4:4:8.96:70,9,0	0/0:0,3:3:0:0,0,0	1/1:7,26:33:54.34:517,54,0	1/1:1,0:5:4.07:12,4,0	1/1:4,15:20:27.26:324,27,0	1/1:4,11:14:23.90:186,24,0	1/1:3,16:19:38.84:302,39,0
chr10	43992642	.	ACTCT	A	859.01	PASS	AB=0.774;AC=24;AF=0.545;AN=44;BaseQRankSum=1.378;DP=354;FS=20.445;HRun=0;HaplotypeScore=66.0375;InbreedingCoeff=-0.0398;MQ=68.38;MQ0=20;MQRankSum=-0.403;QD=4.80;ReadPosRankSum=0.235;VQSLOD=-0.0310;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:12.04:0,12,218	1/1:1,0:1:3:28,3,0	./.	0/0:41,0:18:0.13:0,0,1	1/1:10,1:11:3.01:46,3,0	0/0:17,0:17:6:0,6,113	0/1:10,2:12:22.42:22,0,405	./.	0/0:9,0:8:15.05:0,15,243	./.	./.	1/1:6,6:13:9.02:121,9,0	1/1:5,1:5:3.01:46,3,0	1/1:3,3:5:6.02:93,6,0	0/1:4,1:10:25.39:35,0,25	0/1:4,2:10:22.39:79,0,22	./.	0/1:8,2:10:26.47:38,0,26	0/1:21,1:19:31.66:32,0,97	0/0:5,0:8:2.74:0,3,12	0/0:13,0:12:3:0,3,25	1/1:6,4:10:9.03:139,9,0	1/1:9,2:11:3.48:47,3,0	1/1:4,4:7:3.01:46,3,0	./.	0/1:10,1:13:33.18:33,0,34	0/1:12,2:17:72.70:73,0,100	0/1:11,3:15:57.41:118,0,57
chr10	43994595	.	GACCTGGCACTGGAA	G	8046.26	PASS	AB=0.958;AC=13;AF=0.232;AN=56;BaseQRankSum=13.933;DP=650;FS=2.672;HRun=0;HaplotypeScore=258.0351;InbreedingCoeff=0.8957;MQ=77.21;MQ0=0;MQRankSum=-9.207;QD=59.60;ReadPosRankSum=-2.546;VQSLOD=3.8395;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,114,7499	1/1:1,13:14:27.09:1106,27,0	0/0:18,0:17:42.14:0,42,2293	0/0:25,0:25:23.02:0,23,2722	0/0:12,0:12:33.10:0,33,1800	0/0:33,0:33:90.31:0,90,6055	0/0:23,0:23:69.24:0,69,4238	1/1:5,22:27:57.12:1741,57,0	0/0:28,0:28:84.29:0,84,4944	1/1:2,19:20:47.98:1791,48,0	1/1:1,13:14:30.10:964,30,0	0/0:12,0:12:36.12:0,36,2497	0/0:27,0:27:75.26:0,75,4394	0/0:17,0:17:45.15:0,45,2851	0/0:29,0:29:87.30:0,87,5814	0/0:23,0:23:63.22:0,63,4187	1/1:2,14:16:15.05:578,15,0	0/0:18,0:18:54.18:0,54,3047	0/0:23,0:23:60.20:0,60,3104	0/0:17,0:17:51.18:0,51,3193	0/0:70,0:70:99:0,190,12037	0/0:17,0:17:51.16:0,51,3047	0/0:12,0:12:33.11:0,33,2050	0/0:44,0:44:99:0,123,7856	1/1:3,17:20:45.15:1810,45,0	0/1:22,1:23:55.83:56,0,3860	0/0:15,0:15:45.15:0,45,2827	0/0:13,0:13:39.13:0,39,2719
chr10	43994768	.	CCCTACTT	C	5461.07	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=11.847;DP=706;FS=4.173;HRun=0;HaplotypeScore=171.7815;InbreedingCoeff=0.9923;MQ=88.23;MQ0=0;MQRankSum=-12.236;QD=62.77;ReadPosRankSum=2.701;VQSLOD=4.6936;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,123,4541	1/1:2,9:11:24.08:632,24,0	0/0:32,0:32:90.26:0,90,2827	0/0:24,0:24:61.69:0,62,2265	0/0:34,0:34:99:0,99,3860	0/0:22,0:22:66.23:0,66,2491	0/0:29,0:29:81.26:0,81,3155	0/0:42,0:42:99:0,117,3285	0/0:29,0:29:84.27:0,84,3189	1/1:1,23:24:67.11:1715,67,0	1/1:3,20:23:60.12:1474,60,0	0/0:15,0:15:45.15:0,45,1817	0/0:19,0:19:57.20:0,57,2272	0/0:26,0:26:69.22:0,69,2673	0/0:28,0:28:81.28:0,81,3197	0/0:26,0:26:78.27:0,78,3102	1/1:1,7:8:12.04:316,12,0	0/0:14,0:14:42.14:0,42,1670	0/0:24,0:24:66.23:0,66,2637	0/0:30,0:30:87.30:0,87,3389	0/0:45,0:45:99:0,135,5424	0/0:35,0:35:99:0,102,3957	0/0:14,0:14:42.14:0,42,1675	0/0:22,0:22:66.21:0,66,2487	1/1:2,19:21:51.18:1325,51,0	0/0:25,0:25:72.25:0,72,2840	0/0:26,0:25:78.25:0,78,2875	0/0:13,0:13:39.13:0,39,1575
chr10	43995065	.	TAG	T	4190	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=10.831;DP=594;FS=6.602;HRun=0;HaplotypeScore=80.4319;InbreedingCoeff=0.9994;MQ=83.78;MQ0=0;MQRankSum=-1.152;QD=36.43;ReadPosRankSum=-2.145;VQSLOD=5.2328;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:63.31:0,63,1221	1/1:0,8:9:24.08:335,24,0	0/0:24,0:24:57.01:0,57,957	0/0:16,0:16:39.03:0,39,618	0/0:29,0:29:69.24:0,69,1241	0/0:19,0:19:54.19:0,54,972	0/0:19,0:19:54.17:0,54,934	1/1:1,27:28:81.22:1080,81,0	0/0:24,0:24:69.24:0,69,1215	1/1:1,20:21:57.16:760,57,0	1/1:2,18:20:48.16:671,48,0	0/0:21,0:21:60.19:0,60,1043	0/0:21,0:21:54.18:0,54,960	0/0:21,0:21:54.17:0,54,942	0/0:21,0:21:45.15:0,45,810	0/0:22,0:22:60.21:0,60,1080	1/1:0,20:20:57.19:798,57,0	0/0:16,0:16:42.14:0,42,747	0/0:11,0:11:30.10:0,30,540	0/0:21,0:21:51.17:0,51,909	0/0:24,0:24:57.20:0,57,1023	0/0:20,0:20:57.20:0,57,1001	0/0:21,0:21:48.16:0,48,864	0/0:24,0:24:60.21:0,60,1080	1/1:0,17:17:39.13:546,39,0	0/0:32,1:33:45.33:0,45,1433	0/0:27,0:27:69.24:0,69,1222	0/0:15,0:15:45.10:0,45,775
chr10	43995119	.	ACATTCATTCATT	A	5181.09	PASS	AB=0.649;AC=19;AF=0.339;AN=56;BaseQRankSum=8.476;DP=566;FS=0.000;HRun=0;HaplotypeScore=210.6683;InbreedingCoeff=0.7121;MQ=65.25;MQ0=3;MQRankSum=-10.549;QD=24.32;ReadPosRankSum=-1.358;VQSLOD=3.8975;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:13,12:25:27.09:731,27,0	0/0:12,0:12:21.07:0,21,1056	0/0:19,0:17:9.03:0,9,277	0/0:20,0:16:12.03:0,12,388	1/1:15,16:31:36.12:1005,36,0	0/0:19,0:19:42.14:0,42,2194	0/0:21,0:21:39.13:0,39,1785	0/0:25,0:29:12.35:0,12,124	0/0:22,0:22:51.17:0,51,2504	0/0:25,0:24:57.20:0,57,2478	0/0:22,0:22:48.16:0,48,2641	0/0:9,0:19:27.09:0,27,648	0/0:5,0:17:27.09:0,27,662	0/0:7,0:16:21.07:0,21,478	0/1:7,0:19:14.41:14,0,32	0/1:9,0:18:5.40:5,0,172	0/0:25,0:25:45.15:0,45,2434	1/1:4,0:6:3.11:7,3,0	1/1:12,6:17:18.06:612,18,0	1/1:14,9:23:27.09:914,27,0	1/1:13,4:17:3.01:75,3,0	0/0:5,0:17:33.11:0,33,842	0/0:8,0:24:39.13:0,39,914	0/0:9,0:20:30.10:0,30,677	0/0:25,0:25:45.15:0,45,2166	0/1:12,12:24:3.74:902,0,4	1/1:11,12:23:24.08:732,24,0	1/1:8,1:9:6.02:183,6,0
chr10	43995211	.	AGTATGTGTGTGTGTGTGTGTGT	A	2703.48	PASS	AB=0.857;AC=9;AF=0.161;AN=56;BaseQRankSum=8.111;DP=647;FS=6.213;HRun=0;HaplotypeScore=319.0244;InbreedingCoeff=0.7964;MQ=62.98;MQ0=13;MQRankSum=-1.000;QD=23.92;ReadPosRankSum=0.252;VQSLOD=1.0781;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:63.14:0,63,3096	0/1:10,0:12:19.83:298,0,20	0/0:37,0:23:50.26:0,50,690	0/0:40,0:18:50.57:0,51,757	0/0:19,0:18:33.11:0,33,2227	0/0:17,0:17:39.10:0,39,2615	0/0:17,0:17:33.09:0,33,2339	0/0:25,0:23:63.06:0,63,1709	0/0:21,0:19:41.98:0,42,1730	1/1:3,23:24:56.70:839,57,0	1/1:0,26:26:24.08:1229,24,0	0/0:23,0:23:55.02:0,55,2969	0/0:18,0:17:33.90:0,34,2069	0/0:24,0:24:63.59:0,64,3808	0/0:19,0:18:30.08:0,30,1980	0/0:24,0:24:36.55:0,37,2419	1/1:3,0:32:12.04:309,12,0	0/0:24,0:24:72.14:0,72,3922	0/0:17,0:16:41.26:0,41,651	0/0:22,0:22:48.14:0,48,2986	0/0:31,0:29:54.49:0,54,2530	0/0:23,0:24:60.61:0,61,3551	0/0:30,0:30:83.84:0,84,3716	0/0:31,0:31:75.10:0,75,4231	1/1:0,16:16:3.01:183,3,0	0/0:20,0:20:38.89:0,39,2237	0/0:19,0:19:32.95:0,33,1158	0/0:3,0:3:9.03:0,9,724
chr10	43995214	.	A	ATGTG	3167.99	PASS	AB=1.000;AC=29;AF=0.580;AN=50;BaseQRankSum=-4.127;DP=682;FS=12.650;HRun=0;HaplotypeScore=155.5527;InbreedingCoeff=0.4842;MQ=57.68;MQ0=14;MQRankSum=0.522;QD=7.51;ReadPosRankSum=-1.121;VQSLOD=1.8438;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:34,0:34:11.20:11,0,80	0/0:11,0:11:0.41:0,0,1	./.	./.	0/0:18,0:18:15.03:0,15,190	0/1:17,0:17:0.01:0,0,0	0/0:20,0:20:10.11:0,10,222	1/1:28,0:25:8.75:69,9,0	1/1:21,0:19:9.02:157,9,0	1/1:25,0:23:4.50:16,4,0	0/0:26,0:26:14.37:0,14,115	1/1:24,0:24:24.92:330,25,0	1/1:17,1:17:18.53:359,19,0	1/1:21,2:23:32.84:554,33,0	1/1:22,1:22:11.36:157,11,0	1/1:12,12:25:15.04:350,15,0	0/0:32,0:31:7.56:0,8,60	1/1:23,0:25:29.78:409,30,0	./.	0/1:23,0:24:15.16:15,0,65	0/1:37,0:34:15.76:21,0,16	1/1:25,2:27:18.02:257,18,0	1/1:30,1:31:18.01:234,18,0	1/1:31,2:33:31.03:388,31,0	0/0:16,0:16:3:0,3,28	0/0:25,0:26:9.01:0,9,117	0/0:20,0:21:3:0,3,28	0/1:6,0:6:10.06:10,0,60
chr10	43995448	.	CTCCACATACCTCATTCT	C	8319.64	PASS	AB=0.567;AC=15;AF=0.268;AN=56;BaseQRankSum=13.844;DP=674;FS=4.129;HRun=0;HaplotypeScore=302.7257;InbreedingCoeff=0.8586;MQ=89.26;MQ0=0;MQRankSum=-10.609;QD=61.17;ReadPosRankSum=1.861;VQSLOD=3.8780;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:0,30:30:24.08:1091,24,0	0/0:18,0:18:51.11:0,51,3130	0/0:32,0:32:90.24:0,90,3996	0/0:24,0:24:65.67:0,66,2872	1/1:1,10:11:6.02:181,6,0	0/0:22,0:22:60.19:0,60,3948	0/0:25,0:25:63.22:0,63,4474	0/0:37,0:37:99:0,103,6445	0/0:28,0:27:81.17:0,81,5547	0/0:27,0:27:72.23:0,72,4711	0/0:23,0:23:69.24:0,69,4699	0/0:25,0:25:63.20:0,63,4128	0/0:32,0:31:81.22:0,81,5170	0/0:21,0:21:63.12:0,63,4435	0/0:30,0:30:81.24:0,81,5316	0/0:31,0:30:90.29:0,90,6141	0/0:39,0:39:99:0,114,7425	0/0:18,0:18:48.11:0,48,3334	1/1:3,22:25:69.13:1994,69,0	1/1:0,17:17:30.05:1214,30,0	1/1:2,14:16:9.03:365,9,0	0/0:26,0:26:72.22:0,72,5230	0/0:26,0:26:72.23:0,72,5254	0/0:31,0:31:81.28:0,81,5868	0/0:23,0:23:63.20:0,63,4645	0/1:4,13:17:99:1471,0,179	1/1:2,16:18:42.14:1958,42,0	1/1:2,0:2:5.98:46,6,0
chr10	43995758	.	TTGGAACCA	T	10642.32	PASS	AB=0.540;AC=15;AF=0.268;AN=56;BaseQRankSum=14.951;DP=841;FS=4.719;HRun=0;HaplotypeScore=224.0692;InbreedingCoeff=0.8767;MQ=80.69;MQ0=0;MQRankSum=-17.258;QD=47.51;ReadPosRankSum=1.919;VQSLOD=4.0691;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,38:41:84.68:2246,85,0	0/0:20,0:20:51.18:0,51,2115	0/0:33,0:33:99:0,99,4184	0/0:22,0:22:57.20:0,57,2292	1/1:1,20:21:30.10:848,30,0	0/0:22,0:22:66.21:0,66,2806	0/0:36,0:36:96.33:0,96,4108	0/0:32,0:32:84.28:0,84,3587	0/0:41,0:41:99:0,123,5211	0/0:36,0:36:99:0,102,4302	0/0:30,0:30:90.30:0,90,3792	0/0:36,0:36:99:0,105,4512	0/0:27,0:27:81.28:0,81,3485	0/0:32,0:32:96.33:0,96,4117	0/0:44,0:44:99:0,132,5707	0/0:36,0:36:99:0,102,4272	0/0:29,0:29:84.27:0,84,3512	0/0:27,0:27:75.26:0,75,3313	1/1:7,14:21:42.07:946,42,0	1/1:1,30:31:51.12:1375,51,0	1/1:7,42:49:48.59:1292,49,0	0/0:24,0:24:72.25:0,72,3092	0/0:27,0:27:78.27:0,78,3387	0/0:44,0:44:99:0,126,5445	0/0:19,0:19:57.20:0,57,2506	0/1:4,23:27:60.81:1816,0,61	1/1:2,30:32:72.25:2035,72,0	1/1:0,2:2:3.01:85,3,0
chr10	43996427	.	C	CA	4177.63	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-12.086;DP=679;FS=11.138;HRun=1;HaplotypeScore=66.3611;InbreedingCoeff=0.9434;MQ=77.22;MQ0=0;MQRankSum=-1.014;QD=40.17;ReadPosRankSum=4.140;VQSLOD=3.5894;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,141,1793	1/1:2,11:13:30.10:449,30,0	0/0:19,0:19:54.13:0,54,646	0/0:15,0:15:34.34:0,34,405	0/0:23,0:23:63.17:0,63,786	0/0:21,0:21:60.16:0,60,748	0/0:28,0:28:81.26:0,81,1049	0/0:24,0:23:66.12:0,66,780	0/0:20,0:20:54.15:0,54,669	1/1:1,13:14:29.57:572,30,0	1/1:0,22:22:63.21:910,63,0	0/0:21,0:21:63.20:0,63,812	0/0:22,0:22:63.18:0,63,801	0/0:19,0:19:57.16:0,57,712	0/0:23,0:23:69.22:0,69,894	0/0:24,0:24:69.22:0,69,894	1/1:0,32:32:90.30:1348,90,0	0/0:16,0:16:45.07:0,45,534	0/0:25,0:25:66.08:0,66,803	0/0:24,0:24:69.19:0,69,864	0/0:35,0:35:99:0,102,1290	0/0:25,0:25:72.23:0,72,925	0/0:25,0:25:75.20:0,75,928	0/0:46,0:46:99:0,135,1723	1/1:0,23:23:60.20:899,60,0	0/0:28,2:30:0.36:0,0,964	0/0:26,0:26:75.21:0,75,929	0/0:17,0:17:48.16:0,48,622
chr10	43996858	.	GA	G	5140.35	PASS	AB=0.875;AC=13;AF=0.232;AN=56;BaseQRankSum=13.036;DP=704;FS=2.402;HRun=4;HaplotypeScore=105.7229;InbreedingCoeff=0.8987;MQ=80.30;MQ0=0;MQRankSum=-0.177;QD=28.56;ReadPosRankSum=-0.515;VQSLOD=3.8299;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:99:0,99,1350	1/1:1,11:12:26.78:324,27,0	0/0:19,0:19:48.12:0,48,617	0/0:15,0:15:27.56:0,28,546	0/0:34,0:34:99:0,102,1426	0/0:27,0:27:75.25:0,75,1050	0/0:21,0:21:60.20:0,60,840	1/1:3,34:37:99:1190,102,0	0/0:22,0:22:54.18:0,54,756	1/1:0,34:34:99:1209,102,0	1/1:2,24:26:72:863,72,0	0/0:28,0:28:84.27:0,84,1158	0/0:31,0:31:93.31:0,93,1293	0/0:25,0:25:75.25:0,75,1049	0/0:30,0:30:90.30:0,90,1250	0/0:24,0:24:69.23:0,69,965	1/1:2,20:22:48.15:575,48,0	0/0:29,0:29:87.26:0,87,1198	0/0:16,0:16:45.15:0,45,629	0/0:23,0:23:69.21:0,69,939	0/0:22,0:22:63.13:0,63,824	0/0:30,0:30:87.29:0,87,1217	0/0:25,0:25:69.22:0,69,947	0/0:32,0:32:93.30:0,93,1285	1/1:0,28:28:78.24:935,78,0	0/1:18,3:21:43.76:44,0,662	0/0:30,0:30:90.27:0,90,1212	0/0:8,0:8:21.04:0,21,260
chr10	43997389	.	GAAA	G	2710.43	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=7.125;DP=675;FS=3.175;HRun=15;HaplotypeScore=118.9502;InbreedingCoeff=0.9644;MQ=70.95;MQ0=2;MQRankSum=-1.625;QD=18.44;ReadPosRankSum=4.638;VQSLOD=2.7641;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:25:60.16:0,60,941	1/1:2,7:10:10.39:132,10,0	0/0:28,0:17:12.41:0,12,153	0/0:18,0:9:7.57:0,8,29	0/0:31,0:35:97.47:0,97,1509	0/0:24,0:27:75.17:0,75,1118	0/0:6,0:7:16.30:0,16,272	1/1:8,10:18:21.80:283,22,0	0/0:20,0:20:54.12:0,54,793	1/1:7,23:33:66.72:691,67,0	1/1:9,25:34:59.71:672,60,0	0/0:11,0:20:30.08:0,30,458	0/0:5,0:19:18.04:0,18,255	0/0:8,0:21:33.08:0,33,475	0/0:32,0:36:78.23:0,78,1268	0/0:24,0:27:63.10:0,63,913	1/1:7,20:28:46.36:519,46,0	0/0:16,0:21:45.11:0,45,683	0/0:15,0:18:42.10:0,42,620	0/0:25,0:35:87.06:0,87,1161	0/0:13,0:13:33.05:0,33,494	0/0:12,0:31:66.04:0,66,824	0/0:6,0:24:40.74:0,41,510	0/0:6,0:21:33.11:0,33,472	1/1:2,20:24:51.09:598,51,0	0/0:29,0:32:69.02:0,69,916	0/0:28,0:35:93.04:0,93,1320	0/0:5,0:10:24:0,24,317
chr10	43998537	.	C	CAT	1563.28	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-3.782;DP=729;FS=1.436;HRun=0;HaplotypeScore=138.0415;InbreedingCoeff=0.9949;MQ=91.83;MQ0=0;MQRankSum=-1.403;QD=45.98;ReadPosRankSum=-4.783;VQSLOD=2.5362;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:62,0:62:99:0,161,2461	0/0:10,0:10:27.09:0,27,398	0/0:30,0:30:71.60:0,72,998	0/0:32,0:32:87.13:0,87,1178	0/0:27,0:27:75.25:0,75,1082	0/0:21,0:21:63.18:0,63,886	0/0:18,0:18:51.17:0,51,751	1/1:5,28:34:93.30:1658,93,0	0/0:23,0:23:63.17:0,63,882	0/0:42,0:42:99:0,111,1634	0/0:22,0:22:57.19:0,57,837	0/0:22,0:22:63.21:0,63,928	0/0:21,0:21:63.17:0,63,883	0/0:15,0:15:42.14:0,42,618	0/0:33,0:33:96.29:0,96,1371	0/0:32,0:32:96.32:0,96,1411	0/0:50,0:50:99:0,144,2100	0/0:22,0:22:66.13:0,66,907	0/0:16,0:16:39.11:0,39,552	0/0:27,0:27:81.27:0,81,1182	0/0:29,0:29:84.25:0,84,1195	0/0:21,0:21:54.18:0,54,795	0/0:26,0:26:72.22:0,72,1019	0/0:23,0:23:66.20:0,66,950	0/0:23,0:23:69.23:0,69,1016	0/0:21,0:21:60.19:0,60,863	0/0:20,0:20:60.20:0,60,882	0/0:7,0:7:21.07:0,21,309
chr10	43998854	.	A	AT	7854.47	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-4.202;DP=628;FS=0.000;HRun=7;HaplotypeScore=67.6889;InbreedingCoeff=0.9973;MQ=80.02;MQ0=0;MQRankSum=-4.748;QD=24.86;ReadPosRankSum=-1.439;VQSLOD=4.7252;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,26:27:75.23:906,75,0	1/1:0,0:5:14.38:73,14,0	0/0:19,0:19:40.63:0,41,398	0/0:16,0:16:41.93:0,42,374	1/1:1,11:12:27.08:326,27,0	0/0:23,0:23:66.11:0,66,637	0/0:29,0:29:81.08:0,81,764	1/1:7,32:39:93.27:1111,93,0	0/0:28,0:28:75.10:0,75,718	1/1:3,0:20:51.65:271,52,0	1/1:1,0:20:53.27:267,53,0	0/0:18,0:18:45.07:0,45,434	0/0:26,0:26:75.12:0,75,724	0/0:18,0:18:54.08:0,54,516	0/0:18,0:18:51.08:0,51,492	0/0:19,0:19:54.08:0,54,518	1/1:3,1:26:34.42:278,34,0	0/0:27,0:27:75.09:0,75,715	1/1:3,23:26:69.19:812,69,0	1/1:3,21:24:51.16:613,51,0	1/1:2,27:29:72.22:870,72,0	0/0:25,0:25:75.12:0,75,724	0/0:26,0:26:72.11:0,72,695	0/0:20,0:20:54.09:0,54,521	1/1:3,0:22:51.75:263,52,0	1/1:1,32:34:99:1122,99,0	1/1:0,14:14:39.12:471,39,0	1/1:3,15:18:39.12:471,39,0
chr10	44000439	.	AAAGTCCTC	A	4898.45	PASS	AB=0.967;AC=9;AF=0.161;AN=56;BaseQRankSum=12.306;DP=674;FS=2.910;HRun=0;HaplotypeScore=174.8309;InbreedingCoeff=0.9078;MQ=84.82;MQ0=0;MQRankSum=-9.572;QD=49.48;ReadPosRankSum=-1.823;VQSLOD=4.3494;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,120,5371	0/0:14,0:14:42.10:0,42,1657	0/0:23,0:23:68.67:0,69,2098	0/0:22,0:21:59.51:0,60,2167	0/0:24,0:24:72.25:0,72,3128	0/0:22,0:22:66.23:0,66,3056	0/0:25,0:25:75.23:0,75,3096	1/1:0,21:21:60.08:1389,60,0	0/0:24,0:24:72.22:0,72,3092	1/1:3,14:16:48.14:1245,48,0	1/1:4,7:11:24.07:657,24,0	0/0:26,0:26:78.22:0,78,3415	0/0:24,0:24:72.22:0,72,2953	0/0:25,0:25:75.26:0,75,3419	0/0:26,0:26:78.27:0,78,3571	0/0:29,0:29:87.29:0,87,3871	0/0:32,0:32:96.32:0,96,4332	0/0:22,0:22:63.22:0,63,2911	0/0:18,0:18:54.19:0,54,2470	0/0:25,0:25:75.25:0,75,3231	0/0:34,0:34:99:0,102,4502	0/0:25,0:25:75.25:0,75,3245	0/0:24,0:24:54.25:0,54,2977	0/0:36,0:36:99:0,108,4606	1/1:0,21:21:54.19:1604,54,0	0/1:28,1:29:3.11:3,0,3527	0/0:22,0:21:63.21:0,63,2786	0/0:13,0:13:39.13:0,39,1736
chr10	44000470	.	C	CTT	1556.97	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=10.017;DP=677;FS=2.560;HRun=9;HaplotypeScore=105.0246;InbreedingCoeff=0.9869;MQ=74.28;MQ0=0;MQRankSum=-4.976;QD=25.11;ReadPosRankSum=-5.327;VQSLOD=2.2010;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:43:99:0,102,1114	0/0:7,0:7:21.05:0,21,223	0/0:16,0:16:12.62:0,13,164	0/0:16,0:14:29.40:0,29,311	0/0:25,0:25:54.06:0,54,574	0/0:17,0:17:39.04:0,39,406	0/0:25,0:25:66.11:0,66,687	0/0:20,0:20:47.99:0,48,485	0/0:27,0:27:69.10:0,69,719	1/1:8,10:17:30.02:410,30,0	1/1:2,13:18:42.46:558,42,0	0/0:30,0:30:84.20:0,84,894	0/0:23,0:23:65.91:0,66,666	0/0:21,0:22:51.05:0,51,590	0/0:32,0:33:84.08:0,84,921	0/0:28,0:28:69.12:0,69,720	0/0:41,0:41:99:0,102,1076	0/0:22,0:22:54.12:0,54,575	0/0:12,0:12:30.02:0,30,303	0/0:27,0:27:78.18:0,78,829	0/0:29,0:30:77.91:0,78,810	0/0:26,0:26:63.11:0,63,670	0/0:25,0:25:66.14:0,66,702	0/0:40,0:40:99:0,102,1086	1/1:10,12:26:61.99:732,62,0	0/0:32,1:33:41.04:0,41,835	0/0:20,0:19:57.14:0,57,605	0/0:7,0:7:21.05:0,21,223
chr10	44001253	.	GTTA	G	5991.78	PASS	AB=1.000;AC=26;AF=0.464;AN=56;BaseQRankSum=10.447;DP=381;FS=16.710;HRun=0;HaplotypeScore=77.8383;InbreedingCoeff=0.7367;MQ=75.30;MQ0=1;MQRankSum=-0.875;QD=25.61;ReadPosRankSum=1.797;VQSLOD=3.7163;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,19:25:28.01:590,28,0	0/1:5,0:5:11.97:14,0,12	0/0:15,0:15:11.98:0,12,161	0/0:9,0:8:9.03:0,9,178	1/1:3,19:22:51.13:714,51,0	0/0:21,0:21:45.12:0,45,818	0/0:6,0:6:15.05:0,15,295	1/1:13,15:28:44.94:558,45,0	0/0:9,0:9:15.05:0,15,306	1/1:6,14:20:42.13:584,42,0	1/1:2,14:16:42.10:584,42,0	0/0:8,0:8:6.02:0,6,123	0/0:12,0:12:12.04:0,12,245	0/0:5,0:5:3.01:0,3,49	0/0:3,0:3:3.01:0,3,61	0/0:4,0:4:9.03:0,9,168	0/1:10,0:10:19.98:25,0,20	0/0:26,0:26:57.12:0,57,1015	1/1:2,11:13:33.03:427,33,0	1/1:5,11:16:33.02:430,33,0	1/1:3,7:10:18.06:260,18,0	0/0:5,0:5:3.01:0,3,45	0/0:16,0:16:36.11:0,36,665	0/0:8,0:8:18.06:0,18,352	1/1:3,21:24:51.17:731,51,0	1/1:6,20:25:57.11:731,57,0	1/1:2,9:10:18.06:253,18,0	1/1:6,2:8:7.84:91,8,0
chr10	44001277	.	A	AATTATTAT	828.55	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=2.678;DP=364;FS=7.086;HRun=0;HaplotypeScore=121.8889;InbreedingCoeff=0.7526;MQ=70.81;MQ0=1;MQRankSum=-4.209;QD=46.03;ReadPosRankSum=-0.176;VQSLOD=3.0973;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:66.22:0,66,1745	1/1:0,2:3:6.02:264,6,0	0/0:8,0:8:5.32:0,5,392	0/0:12,0:11:29.46:0,29,676	0/0:21,0:21:52.45:0,52,1679	0/0:17,0:17:48.16:0,48,1310	0/0:4,0:4:12.04:0,12,352	0/0:20,0:20:53.56:0,54,1425	0/0:11,0:11:30.10:0,30,843	0/0:20,0:20:60.21:0,60,1726	0/0:24,0:24:69.24:0,69,2000	0/0:3,0:3:9.03:0,9,231	0/0:4,0:4:12.04:0,12,363	0/0:3,0:3:9.03:0,9,233	0/0:6,0:6:12.04:0,12,349	0/0:4,0:4:12.04:0,12,350	1/1:4,7:15:15.61:672,16,0	0/0:29,0:29:81.21:0,81,2184	0/0:19,0:19:52.06:0,52,1376	0/0:17,0:17:48.16:0,48,1344	0/0:8,0:8:24.08:0,24,708	0/0:3,0:3:9.03:0,9,110	0/0:13,0:13:39.12:0,39,950	0/0:8,0:8:24.06:0,24,659	0/0:24,0:24:66.03:0,66,1790	0/0:21,0:20:53.57:0,54,1461	0/0:13,0:12:27.56:0,28,736	0/0:7,0:7:21.05:0,21,541
chr10	44001372	.	TCGTC	T	3530.01	PASS	AB=1.000;AC=26;AF=0.464;AN=56;BaseQRankSum=3.273;DP=437;FS=14.774;HRun=0;HaplotypeScore=87.9422;InbreedingCoeff=0.8183;MQ=84.24;MQ0=1;MQRankSum=-1.818;QD=16.19;ReadPosRankSum=-1.827;VQSLOD=1.5765;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:22:28.76:418,29,0	1/1:5,0:5:3.01:39,3,0	0/0:32,0:27:50.13:0,50,771	0/0:26,0:20:38.84:0,39,681	0/1:11,0:11:0:0,0,0	0/0:8,0:8:21.07:0,21,349	0/0:22,0:22:60.20:0,60,1130	1/1:17,0:16:39.10:544,39,0	0/0:13,0:13:36.12:0,36,635	1/1:15,0:15:26.55:378,27,0	1/1:17,0:17:8.51:87,9,0	0/0:15,0:15:39.13:0,39,665	0/0:13,0:13:30.07:0,30,469	0/0:9,0:9:22.32:0,22,408	0/0:18,0:18:40.02:0,40,706	0/0:11,0:11:27.09:0,27,480	1/1:22,0:22:51.15:706,51,0	0/0:19,0:19:39.13:0,39,660	1/1:10,0:10:15.05:212,15,0	1/1:13,0:13:3.01:36,3,0	1/1:33,0:33:48.06:649,48,0	0/0:5,0:5:11.91:0,12,167	0/0:8,0:8:20.87:0,21,359	0/0:20,0:20:42.14:0,42,769	1/1:21,0:21:8.61:63,9,0	1/1:11,0:11:11.87:145,12,0	1/1:2,10:12:2.68:53,3,0	0/1:9,0:9:4.43:202,0,4
chr10	44001377	.	CGTCCGTGTGT	C	3174.63	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=2.868;DP=428;FS=14.593;HRun=0;HaplotypeScore=127.2066;InbreedingCoeff=0.5665;MQ=80.99;MQ0=7;MQRankSum=-1.869;QD=16.11;ReadPosRankSum=-0.551;VQSLOD=1.5692;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:20,0:20:99:274,0,209	1/1:1,0:5:3.01:81,3,0	0/0:28,0:23:50.13:0,50,772	0/0:25,0:19:38.84:0,39,681	0/1:10,0:9:0:0,0,0	0/0:10,0:8:21.07:0,21,475	0/0:24,0:24:66.22:0,66,1942	1/1:17,0:15:10.58:510,11,0	0/0:13,0:13:39.13:0,39,1078	1/1:6,12:17:26.53:438,27,0	1/1:3,11:14:9.03:268,9,0	0/0:14,0:14:39.13:0,39,741	0/0:16,0:16:33.03:0,33,668	0/0:9,0:9:22.32:0,22,562	0/0:16,0:16:39.60:0,40,778	0/0:12,0:12:27.56:0,28,602	1/1:21,0:21:51.01:640,51,0	0/0:17,0:17:39.13:0,39,810	1/1:6,0:6:15.05:212,15,0	1/1:12,0:11:3.01:36,3,0	0/1:38,0:37:99:370,0,209	0/0:5,0:4:11.91:0,12,167	0/0:9,0:9:20.87:0,21,533	0/0:21,0:21:42.14:0,42,1189	1/1:0,17:18:9.03:221,9,0	0/1:11,0:11:99:114,0,122	0/0:12,0:12:6.49:0,6,113	0/1:7,0:7:72.77:202,0,73
chr10	44001381	.	C	CGT	634.80	PASS	AB=0.958;AC=32;AF=0.696;AN=46;BaseQRankSum=0.603;DP=471;FS=19.621;HRun=0;HaplotypeScore=115.0589;InbreedingCoeff=0.1671;MQ=69.39;MQ0=9;MQRankSum=-0.512;QD=1.83;ReadPosRankSum=-2.523;VQSLOD=0.3161;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:29:16.13:116,16,0	0/0:4,0:4:2.80:0,3,13	./.	./.	0/0:12,0:11:0.47:0,0,1	0/1:16,0:14:1.86:19,0,2	0/1:26,0:27:14.10:14,0,132	0/1:19,0:15:0:0,0,0	0/0:14,0:15:12.72:0,13,102	0/0:15,0:14:2.63:0,3,14	0/1:12,0:12:7.32:7,0,19	1/1:16,0:16:5.78:61,6,0	1/1:12,4:16:2.81:44,3,0	0/1:11,0:11:26.73:27,0,27	1/1:19,0:19:0.24:0,0,0	0/1:10,0:15:1.01:21,0,1	./.	1/1:18,8:24:6.96:87,7,0	1/1:15,0:15:5.14:25,5,0	./.	1/1:38,0:37:2.77:86,3,0	./.	1/1:11,0:11:2.47:12,2,0	1/1:16,9:26:8.50:153,9,0	1/1:19,0:19:0.58:7,1,0	1/1:8,0:9:3.46:25,3,0	1/1:14,0:14:7.23:40,7,0	1/1:8,0:8:2.60:10,3,0
chr10	44001927	.	C	CT	2530.37	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-8.618;DP=829;FS=1.549;HRun=2;HaplotypeScore=110.9263;InbreedingCoeff=0.9896;MQ=93.64;MQ0=0;MQRankSum=-2.085;QD=34.66;ReadPosRankSum=-0.477;VQSLOD=3.1846;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:58:99:0,171,2075	0/0:6,0:6:15.02:0,15,170	0/0:30,0:30:69.46:0,69,943	0/0:44,0:44:99:0,114,1347	0/0:23,0:23:66.21:0,66,818	0/0:22,0:22:63.20:0,63,781	0/0:38,0:38:99:0,114,1413	0/0:31,0:31:87.27:0,87,1078	0/0:27,0:27:78.24:0,78,966	1/1:3,32:35:98.87:1334,99,0	1/1:0,13:13:33.11:475,33,0	0/0:30,0:30:84.25:0,84,1028	0/0:28,0:28:72.21:0,72,879	0/0:31,0:30:87.26:0,87,1064	0/0:27,0:27:78.23:0,78,954	0/0:19,0:18:57.18:0,57,707	0/0:44,0:44:99:0,129,1599	0/0:33,0:33:96.30:0,96,1187	0/0:27,0:27:78.24:0,78,965	0/0:17,0:17:48.15:0,48,594	0/0:74,0:74:99:0,217,2650	0/0:30,0:30:81.24:0,81,991	0/0:20,0:20:60.18:0,60,731	0/0:39,0:39:99:0,108,1310	1/1:1,24:25:60.20:864,60,0	0/0:21,1:22:19.97:0,20,689	0/0:30,0:30:72.22:0,72,892	0/0:6,0:6:18.06:0,18,223
chr10	44002493	.	GTT	G	359.31	PASS	AB=0.736;AC=3;AF=0.054;AN=56;BaseQRankSum=0.601;DP=414;FS=6.699;HRun=8;HaplotypeScore=128.3163;InbreedingCoeff=-0.0707;MQ=64.61;MQ0=3;MQRankSum=2.524;QD=8.17;ReadPosRankSum=-1.118;VQSLOD=0.1711;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:36.02:0,36,375	0/0:5,0:5:15.05:0,15,250	0/0:5,0:4:5.98:0,6,48	0/0:8,0:8:10.17:0,10,152	0/0:33,0:33:75.57:0,76,762	0/0:24,0:24:69.24:0,69,1159	0/0:16,0:16:45.08:0,45,687	0/0:39,0:39:93.49:0,93,572	0/0:10,0:10:21.07:0,21,347	0/1:8,6:14:40.69:205,0,41	0/1:7,7:13:48.36:201,0,48	0/0:12,0:12:33.10:0,33,520	0/0:10,0:10:30.10:0,30,496	0/0:12,0:12:30.10:0,30,496	0/0:14,0:14:42.14:0,42,690	0/0:13,0:13:33.10:0,33,520	0/0:17,0:17:42.14:0,42,687	0/0:17,0:17:48.14:0,48,780	0/0:19,0:19:48.06:0,48,481	0/0:18,0:18:47.82:0,48,483	0/0:6,0:6:15.01:0,15,150	0/0:3,0:3:3.01:0,3,47	0/0:7,0:7:21.07:0,21,347	0/0:12,0:12:36.11:0,36,584	0/1:13,3:15:52.91:53,0,145	0/0:17,0:17:48.06:0,48,487	0/0:23,0:23:60:0,60,553	0/0:16,0:16:48.05:0,48,478
chr10	44002499	.	T	TTAAA	8606.54	PASS	AB=0.817;AC=23;AF=0.411;AN=56;BaseQRankSum=9.394;DP=400;FS=1.239;HRun=0;HaplotypeScore=119.0355;InbreedingCoeff=0.7935;MQ=60.74;MQ0=3;MQRankSum=-6.983;QD=38.08;ReadPosRankSum=-1.761;VQSLOD=4.8595;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,3:13:35.85:514,36,0	0/0:5,0:5:15.04:0,15,225	0/1:3,0:2:1.04:1,0,7	0/0:7,0:7:4.49:0,4,74	1/1:16,13:29:83.87:1510,84,0	0/0:24,0:24:72.23:0,72,1307	0/0:15,0:15:42.11:0,42,680	1/1:1,0:38:47.83:660,48,0	0/0:7,0:7:21.04:0,21,331	0/1:8,0:12:12.65:74,0,13	0/1:8,0:13:2.89:97,0,3	0/0:13,0:13:33.07:0,33,483	0/0:10,0:10:30.05:0,30,462	0/0:11,0:11:30.06:0,30,482	0/0:15,0:15:45.08:0,45,688	0/0:13,0:13:36.06:0,36,523	0/0:16,0:16:36.88:0,37,454	0/0:18,0:18:48.15:0,48,857	1/1:12,8:21:57.04:1088,57,0	1/1:10,6:16:48:764,48,0	1/1:3,2:5:11.92:202,12,0	0/0:1,0:1:2.99:0,3,24	0/0:7,0:7:21.01:0,21,264	0/0:12,0:12:36.11:0,36,659	1/1:3,0:14:28.21:160,28,0	1/1:10,9:19:53.82:988,54,0	1/1:12,13:25:69.15:1507,69,0	1/1:6,10:16:48.15:1042,48,0
chr10	44002545	.	A	ACATCACGTTTAGC	33639.07	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=0.448;DP=415;FS=0.392;HRun=0;HaplotypeScore=149.8329;InbreedingCoeff=0.9150;MQ=62.00;MQ0=0;MQRankSum=-15.795;QD=137.87;ReadPosRankSum=-1.727;VQSLOD=4.7453;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,6:14:36.12:1920,36,0	1/1:2,2:5:9.03:470,9,0	0/1:4,0:4:7.23:7,0,58	0/0:10,0:10:23.98:0,24,568	1/1:10,9:19:44.89:2316,45,0	0/0:27,0:27:78.27:0,78,2985	0/0:15,0:15:42.14:0,42,1560	1/1:22,6:28:69.24:3671,69,0	0/0:12,0:12:36.12:0,36,1400	1/1:7,15:22:57.20:3361,57,0	1/1:1,6:7:15.05:855,15,0	0/0:15,0:15:42.14:0,42,1693	0/0:7,0:7:21.07:0,21,807	0/0:15,0:15:45.15:0,45,1693	0/0:11,0:11:33.11:0,33,1247	0/0:13,0:13:36.12:0,36,1402	1/1:8,6:15:36.12:2020,36,0	0/0:19,0:19:54.19:0,54,2113	1/1:20,9:29:63.22:3155,63,0	1/1:6,10:17:39.13:2486,39,0	1/1:6,2:11:12.04:546,12,0	0/0:3,0:3:9.03:0,9,363	0/0:6,0:6:18.06:0,18,717	0/0:18,0:18:48.16:0,48,1880	1/1:6,9:15:42.14:2423,42,0	1/1:13,10:23:66.23:4250,66,0	1/1:6,22:28:75.26:4769,75,0	1/1:0,7:7:21.07:1389,21,0
chr10	44002634	.	CCTT	C	2100.32	PASS	AB=0.933;AC=9;AF=0.161;AN=56;BaseQRankSum=6.466;DP=411;FS=23.584;HRun=0;HaplotypeScore=71.4908;InbreedingCoeff=0.8207;MQ=88.62;MQ0=0;MQRankSum=-4.034;QD=32.31;ReadPosRankSum=-0.583;VQSLOD=1.8122;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:81.28:0,81,1841	0/0:7,0:7:18.04:0,18,348	0/0:14,0:14:30.09:0,30,580	0/0:19,0:19:54.11:0,54,1089	0/0:8,0:8:24.08:0,24,552	0/0:24,0:24:72.22:0,72,1564	0/0:13,0:13:39.13:0,39,892	1/1:0,22:22:57.16:929,57,0	0/0:10,0:10:30.09:0,30,630	1/1:0,7:7:21.07:352,21,0	1/1:0,10:10:27.09:459,27,0	0/0:14,0:14:42.14:0,42,926	0/0:11,0:11:33.11:0,33,760	0/0:10,0:10:30.10:0,30,633	0/0:12,0:12:36.12:0,36,812	0/0:11,0:11:30.09:0,30,631	0/0:22,0:22:63.13:0,63,1292	0/0:20,0:20:60.21:0,60,1343	0/0:19,0:19:57.18:0,57,1254	0/0:11,0:11:33.11:0,33,710	0/0:38,0:38:99:0,99,2196	0/0:4,0:4:8.96:0,9,156	0/0:2,0:2:6.02:0,6,121	0/0:29,0:29:87.27:0,87,1898	1/1:1,11:12:30.10:511,30,0	0/1:13,1:14:12.04:12,0,685	0/0:17,0:17:51.01:0,51,1088	0/0:3,0:3:9.03:0,9,208
chr10	44003304	.	T	TG	5079.18	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-5.870;DP=605;FS=1.220;HRun=1;HaplotypeScore=63.4462;InbreedingCoeff=0.9983;MQ=86.69;MQ0=0;MQRankSum=-3.063;QD=41.29;ReadPosRankSum=-0.322;VQSLOD=5.1431;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:56:99:0,163,2103	1/1:0,8:8:24.08:359,24,0	0/0:18,0:18:47.33:0,47,646	0/0:23,0:23:26.60:0,27,517	0/0:13,0:13:36.08:0,36,449	0/0:23,0:23:57.18:0,57,740	0/0:29,0:29:84.24:0,84,1060	1/1:1,27:28:78.25:1149,78,0	0/0:21,0:21:63.19:0,63,802	1/1:0,24:25:72.23:1054,72,0	1/1:0,8:8:21.07:315,21,0	0/0:15,0:15:42.14:0,42,545	0/0:21,0:21:57.18:0,57,740	0/0:15,0:15:39.13:0,39,506	0/0:21,0:21:63.16:0,63,799	0/0:18,0:18:45.15:0,45,584	1/1:0,33:33:87.29:1304,87,0	0/0:34,0:34:99:0,102,1324	0/0:19,0:19:54.16:0,54,687	0/0:12,0:12:36.10:0,36,453	0/0:39,0:39:99:0,111,1441	0/0:17,0:17:51.16:0,51,650	0/0:13,0:13:39.09:0,39,464	0/0:23,0:23:66.10:0,66,802	1/1:1,20:21:60.20:899,60,0	0/0:15,0:15:42.14:0,42,545	0/0:27,0:27:78.25:0,78,1012	0/0:10,0:10:30.10:0,30,389
chr10	44003464	.	TAA	T	4769.25	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=9.638;DP=472;FS=7.735;HRun=3;HaplotypeScore=87.3349;InbreedingCoeff=0.9907;MQ=73.98;MQ0=0;MQRankSum=-7.752;QD=39.09;ReadPosRankSum=0.138;VQSLOD=3.8723;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:39.13:0,39,753	1/1:0,12:12:24.08:359,24,0	0/0:11,0:12:30.09:0,30,514	0/0:12,0:11:24.08:0,24,434	0/0:18,0:18:48.15:0,48,895	0/0:23,0:23:69.24:0,69,1332	0/0:15,0:15:45.14:0,45,837	1/1:0,26:26:75.24:1125,75,0	0/0:12,0:12:36.12:0,36,683	1/1:2,17:19:57.12:821,57,0	1/1:1,15:16:42.14:631,42,0	0/0:12,0:12:30.08:0,30,543	0/0:10,0:10:30.09:0,30,548	0/0:7,0:7:21.07:0,21,395	0/0:13,0:13:36.09:0,36,652	0/0:12,0:12:30.10:0,30,572	1/1:1,25:26:63.21:964,63,0	0/0:24,0:24:66.19:0,66,1237	0/0:24,0:24:69.24:0,69,1304	0/0:19,0:19:51.16:0,51,911	0/0:14,0:14:42.13:0,42,767	0/0:10,0:10:30.05:0,30,491	0/0:7,0:7:21.06:0,21,374	0/0:21,0:21:60.20:0,60,1153	1/1:0,23:23:57.19:870,57,0	0/0:17,0:17:45.14:0,45,818	0/0:29,0:29:51.10:0,51,913	0/0:9,0:9:12.04:0,12,221
chr10	44003478	.	T	TA	1573.95	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=7.597;DP=428;FS=0.565;HRun=6;HaplotypeScore=94.8881;InbreedingCoeff=0.9237;MQ=67.94;MQ0=0;MQRankSum=-8.841;QD=28.11;ReadPosRankSum=-1.156;VQSLOD=3.2802;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:26:18.01:0,18,175	0/0:8,0:8:18.04:0,18,183	0/0:15,0:13:9.25:0,9,202	0/0:10,0:8:17.98:0,18,169	0/0:21,0:21:48.04:0,48,471	0/0:22,0:22:60.13:0,60,612	0/0:15,0:15:36.07:0,36,367	0/0:24,0:24:60.04:0,60,590	0/0:14,0:14:42.08:0,42,421	1/1:2,17:19:51.15:625,51,0	1/1:3,14:17:39.12:490,39,0	0/0:9,0:9:27.01:0,27,263	0/0:8,0:8:18.03:0,18,177	0/0:8,0:8:18:0,18,168	0/0:8,0:8:24.05:0,24,245	0/0:8,0:8:15.03:0,15,153	0/0:25,0:25:66.15:0,66,673	0/0:21,0:21:29.85:0,30,457	0/0:27,0:27:78.16:0,78,784	0/0:18,0:18:39.01:0,39,372	0/0:12,0:12:24.05:0,24,245	0/0:5,0:5:15.03:0,15,153	0/0:6,0:6:12.03:0,12,122	0/0:18,0:18:31.90:0,32,432	1/1:4,16:20:48.15:601,48,0	0/0:11,0:11:24.05:0,24,263	0/0:23,0:23:24.52:0,25,245	0/0:8,0:8:9.02:0,9,92
chr10	44003497	.	A	ATATGTG	3946.60	PASS	AB=0.883;AC=21;AF=0.375;AN=56;BaseQRankSum=-0.023;DP=477;FS=7.718;HRun=0;HaplotypeScore=153.2146;InbreedingCoeff=0.0849;MQ=55.32;MQ0=9;MQRankSum=-1.472;QD=13.11;ReadPosRankSum=-3.688;VQSLOD=1.3037;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:6,0:29:18.02:85,0,18	0/1:5,0:5:40.86:69,0,41	0/0:17,0:8:13.01:0,13,148	0/0:13,0:7:7.19:0,7,118	0/1:7,0:22:12.83:210,0,13	0/0:20,0:20:59.75:0,60,524	0/0:21,0:22:61.73:0,62,837	0/1:37,0:36:99:249,0,447	0/0:10,0:12:35.44:0,35,391	0/0:17,0:19:53.53:0,54,445	0/0:10,0:16:12.01:0,12,145	0/1:12,0:13:43.54:44,0,94	0/1:8,0:8:47.84:221,0,48	0/0:7,0:7:8.89:0,9,64	0/0:11,0:13:14.94:0,15,121	0/1:7,0:7:48.11:48,0,63	0/1:22,0:32:99:465,0,151	0/1:17,0:20:99:253,0,162	1/1:24,0:23:59.42:581,59,0	1/1:3,13:17:6.02:159,6,0	0/1:14,0:12:20.15:208,0,20	0/0:8,0:10:5.78:0,6,42	0/0:7,0:7:5.99:0,6,49	0/1:25,0:25:70.93:71,0,184	0/0:9,0:17:12.04:0,12,211	1/1:4,10:14:33.94:550,34,0	1/1:3,15:21:15.48:485,15,0	1/1:2,6:10:9.03:248,9,0
chr10	44003991	.	A	AG	2485.18	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-7.315;DP=529;FS=4.596;HRun=2;HaplotypeScore=54.3512;InbreedingCoeff=0.9925;MQ=77.86;MQ0=1;MQRankSum=-0.878;QD=29.24;ReadPosRankSum=-0.426;VQSLOD=2.9892;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,99,1212	1/1:0,11:11:27.09:389,27,0	0/0:22,0:15:45.14:0,45,550	0/0:20,0:16:39.12:0,39,481	0/0:21,0:21:36.08:0,36,413	0/0:22,0:22:57.11:0,57,673	0/0:24,0:24:66.21:0,66,818	1/1:2,19:15:35.98:418,36,0	0/0:23,0:23:66.19:0,66,805	1/1:0,12:12:33.07:433,33,0	1/1:2,5:7:21.05:268,21,0	0/0:14,0:14:42.12:0,42,508	0/0:18,0:18:48.14:0,48,582	0/0:19,0:19:57.16:0,57,693	0/0:22,0:22:63.20:0,63,780	0/0:16,0:16:45.13:0,45,546	1/1:1,13:14:39.13:560,39,0	0/0:22,0:22:57.17:0,57,695	0/0:25,0:25:66.18:0,66,783	0/0:15,0:15:39.03:0,39,445	0/0:35,0:35:99:0,102,1222	0/0:14,0:14:32.31:0,32,378	0/0:18,0:18:50.99:0,51,580	0/0:15,0:15:42.13:0,42,520	1/1:1,19:20:42.14:604,42,0	0/0:20,0:20:57.14:0,57,660	0/0:19,0:19:57.18:0,57,706	0/0:4,0:4:12.04:0,12,146
chr10	44005278	.	T	TACTGGTA	6256.90	PASS	AC=28;AF=0.609;AN=46;BaseQRankSum=0.327;DP=614;FS=0.869;HRun=0;HaplotypeScore=182.7811;InbreedingCoeff=0.7533;MQ=68.34;MQ0=4;MQRankSum=-0.739;QD=17.48;ReadPosRankSum=-3.669;VQSLOD=3.6569;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:44,0:43:36.12:811,36,0	./.	./.	./.	1/1:25,0:25:29.50:490,29,0	0/0:22,0:22:6.02:0,6,111	0/0:24,0:24:3.01:0,3,66	./.	0/0:30,0:30:21.05:0,21,417	./.	0/0:9,0:14:5.75:0,6,44	1/1:16,4:22:6.02:161,6,0	1/1:27,0:27:18.06:539,18,0	1/1:12,3:15:9.03:270,9,0	0/0:16,0:23:12.04:0,12,172	0/0:12,0:17:15.03:0,15,203	0/0:3,0:4:3.01:0,3,47	0/0:13,0:13:6.02:0,6,128	1/1:34,0:34:18.06:384,18,0	1/1:28,0:28:45.13:836,45,0	1/1:29,0:28:21.04:335,21,0	1/1:9,3:12:6.02:215,6,0	1/1:24,0:24:16.30:334,16,0	1/1:15,1:19:0.47:1,0,0	0/0:8,0:12:9:0,9,120	1/1:33,0:33:39.12:911,39,0	1/1:42,0:42:39.13:882,39,0	1/1:4,0:4:3.01:87,3,0
chr10	44005400	.	TTCTC	T	330.11	PASS	AB=0.952;AC=16;AF=0.296;AN=54;BaseQRankSum=1.355;DP=464;FS=0.978;HRun=0;HaplotypeScore=94.6732;InbreedingCoeff=0.2734;MQ=72.99;MQ0=18;MQRankSum=-3.053;QD=2.12;ReadPosRankSum=-0.858;VQSLOD=1.7021;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:20:14.41:14,0,105	0/0:10,0:10:3.37:0,3,26	./.	0/0:47,0:20:0:0,0,1	0/1:9,0:12:13.26:39,0,13	0/0:15,0:15:3.01:0,3,33	0/1:14,0:14:10.54:11,0,43	0/0:39,0:38:16.12:0,16,107	0/0:19,0:19:14.21:0,14,138	0/0:13,0:13:6.01:0,6,58	0/1:9,1:10:16.32:16,0,26	0/0:16,0:17:11.51:0,12,105	0/0:17,0:16:20.57:0,21,164	0/0:9,0:8:5.99:0,6,50	0/0:10,0:17:3.01:0,3,36	0/0:12,0:12:9.02:0,9,113	1/1:6,0:6:6.72:39,7,0	0/0:12,0:12:15.02:0,15,167	1/1:16,6:21:12.73:89,13,0	0/1:10,0:10:2.69:43,0,3	0/1:19,0:19:2.73:34,0,3	0/0:19,0:19:5.88:0,6,74	0/0:9,0:9:9.03:0,9,135	0/0:25,0:22:2.18:0,2,23	0/0:7,0:9:8.49:0,8,50	1/1:13,0:13:2.97:21,3,0	1/1:15,4:19:8.71:130,9,0	1/1:7,2:8:3.01:47,3,0
chr10	44005450	.	CCT	C	489.73	PASS	AB=0.826;AC=10;AF=0.179;AN=56;BaseQRankSum=7.203;DP=357;FS=7.858;HRun=0;HaplotypeScore=72.9066;InbreedingCoeff=0.1480;MQ=47.95;MQ0=25;MQRankSum=-4.454;QD=6.05;ReadPosRankSum=-0.476;VQSLOD=1.9707;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:19:44.97:0,45,914	0/1:1,1:2:31.33:31,0,34	0/0:33,0:5:14.72:0,15,229	0/0:33,0:7:5.67:0,6,127	0/0:12,0:12:29.85:0,30,551	0/0:7,0:7:21.07:0,21,373	0/0:14,0:14:32.46:0,32,593	0/1:13,1:12:24.91:25,0,94	0/1:8,0:8:23.80:24,0,299	0/1:2,12:14:56.94:410,0,57	1/1:7,4:11:5.46:18,5,0	0/0:15,0:14:0.54:0,1,459	0/0:10,0:9:12.51:0,13,336	0/0:13,0:12:19.39:0,19,535	0/0:16,0:14:27.02:0,27,522	0/0:8,0:7:18.06:0,18,358	1/1:4,4:8:8.59:64,9,0	0/0:6,0:5:11.72:0,12,243	0/0:9,0:7:18.03:0,18,301	0/0:10,0:10:24.04:0,24,441	0/0:14,0:13:27.52:0,28,502	0/1:15,0:15:7.26:7,0,543	0/0:8,0:7:17.93:0,18,320	0/0:15,0:13:13.76:0,14,246	0/0:3,7:10:5.84:0,6,40	0/1:7,2:9:52.98:53,0,378	0/0:14,0:14:38.83:0,39,701	0/0:7,0:7:18.06:0,18,325
chr10	44006545	.	GAC	G	976.30	PASS	AB=0.875;AC=32;AF=0.615;AN=52;BaseQRankSum=5.423;DP=486;FS=0.699;HRun=0;HaplotypeScore=74.2058;InbreedingCoeff=0.3329;MQ=63.73;MQ0=7;MQRankSum=0.519;QD=3.40;ReadPosRankSum=3.720;VQSLOD=1.8049;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:23:11.36:56,11,0	0/0:3,0:3:6:0,6,66	./.	./.	1/1:8,0:16:11.35:56,11,0	0/0:13,0:19:12:0,12,118	0/0:22,0:29:11.98:0,12,116	0/0:15,0:14:8.97:0,9,85	0/0:19,0:21:23.64:0,24,289	0/1:13,2:15:36.20:36,0,154	1/1:6,1:7:3.01:33,3,0	1/1:14,3:16:6.02:65,6,0	1/1:7,0:8:2.84:14,3,0	1/1:13,5:19:17.88:177,18,0	0/0:22,0:22:30.08:0,30,426	0/1:10,2:12:23.61:24,0,59	0/0:22,1:31:0.39:0,0,293	0/1:18,1:19:8.58:9,0,243	1/1:10,0:12:2.84:14,3,0	1/1:9,0:12:2.84:14,3,0	0/1:20,0:18:0:0,0,0	1/1:10,0:12:5.85:46,6,0	1/1:8,3:10:6.49:66,6,0	1/1:10,11:23:35.76:354,36,0	0/1:16,1:19:25.73:26,0,176	0/1:9,0:15:30.40:30,0,31	1/1:14,0:18:17.20:96,17,0	1/1:3,0:6:5.68:28,6,0
chr10	44006770	.	T	TG	6886.97	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=12.163;DP=725;FS=3.097;HRun=0;HaplotypeScore=85.4774;InbreedingCoeff=0.9989;MQ=74.08;MQ0=0;MQRankSum=-1.227;QD=43.59;ReadPosRankSum=-0.308;VQSLOD=4.9387;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:57:99:0,162,2210	1/1:0,7:7:21.07:336,21,0	0/0:19,0:19:57.15:0,57,747	0/0:22,0:22:53.72:0,54,633	0/0:30,0:30:87.23:0,87,1175	0/0:20,0:20:60.20:0,60,839	0/0:28,0:28:81.23:0,81,1096	1/1:6,36:42:99:1959,126,0	0/0:27,0:27:81.27:0,81,1133	1/1:1,28:29:87.30:1387,87,0	1/1:0,13:13:36.12:576,36,0	0/0:31,0:31:93.29:0,93,1268	0/0:20,0:20:60.20:0,60,839	0/0:26,0:26:78.26:0,78,1089	0/0:23,0:23:66.22:0,66,923	0/0:24,0:24:72.19:0,72,969	1/1:2,32:34:81.28:1287,81,0	0/0:18,0:18:45.14:0,45,612	0/0:21,0:21:63.20:0,63,861	0/0:39,0:39:99:0,117,1619	0/0:20,0:20:60.18:0,60,820	0/0:25,0:25:75.25:0,75,1048	0/0:29,0:29:87.28:0,87,1200	0/0:32,0:32:96.26:0,96,1303	1/1:0,33:33:84.29:1342,84,0	0/0:23,0:23:63.21:0,63,881	0/0:24,0:23:72.24:0,72,1002	0/0:9,0:9:27.09:0,27,378
chr10	44006860	.	GA	G	1533.25	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=7.345;DP=698;FS=3.530;HRun=2;HaplotypeScore=85.5735;InbreedingCoeff=0.9975;MQ=64.56;MQ0=1;MQRankSum=-2.002;QD=30.06;ReadPosRankSum=1.260;VQSLOD=3.3458;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:58:99:0,165,2360	0/0:7,0:7:21.07:0,21,314	0/0:21,0:17:44.08:0,44,598	0/0:32,0:28:75.05:0,75,952	0/0:23,0:23:66.20:0,66,925	0/0:20,0:20:60.15:0,60,817	0/0:23,0:23:69.22:0,69,1012	0/0:36,0:36:99:0,105,1524	0/0:29,0:29:87.26:0,87,1245	1/1:3,21:24:69.18:874,69,0	1/1:0,10:10:24.08:310,24,0	0/0:29,0:29:87.28:0,87,1276	0/0:22,0:22:58.60:0,59,889	0/0:25,0:25:75.25:0,75,1122	0/0:37,0:37:99:0,111,1626	0/0:24,0:24:72.24:0,72,1067	0/0:36,0:36:99:0,99,1434	0/0:28,0:28:84.28:0,84,1255	0/0:14,0:14:39.13:0,39,567	0/0:20,0:20:51.15:0,51,724	0/0:43,0:43:99:0,129,1905	0/0:18,0:18:45.15:0,45,669	0/0:13,0:13:36.12:0,36,538	0/0:38,0:38:99:0,111,1616	1/1:4,13:17:39.11:491,39,0	0/0:24,1:25:36.30:0,36,1023	0/0:16,0:16:45.15:0,45,673	0/0:10,0:10:30.06:0,30,390
chr10	44007165	.	C	CTG	1773.42	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=10.994;DP=508;FS=3.541;HRun=0;HaplotypeScore=92.9132;InbreedingCoeff=0.9544;MQ=80.48;MQ0=0;MQRankSum=-10.101;QD=30.06;ReadPosRankSum=1.598;VQSLOD=5.6104;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:90.31:0,90,1456	1/1:0,1:1:3.01:39,3,0	0/0:15,0:15:36.14:0,36,637	0/0:14,0:15:27.86:0,28,641	0/0:25,0:25:72.21:0,72,1092	0/0:25,0:25:75.24:0,75,1192	0/0:25,0:25:75.25:0,75,1196	1/1:0,13:14:42.14:591,42,0	0/0:19,0:19:57.19:0,57,927	1/1:0,10:11:30.10:414,30,0	1/1:0,4:4:11.51:99,12,0	0/0:20,0:20:60.19:0,60,950	0/0:14,0:14:42.14:0,42,678	0/0:24,0:24:72.25:0,72,1169	0/0:22,0:22:63.21:0,63,1000	0/0:23,0:23:69.24:0,69,1123	1/1:3,10:13:17.88:267,18,0	0/0:18,0:18:54.18:0,54,881	0/0:21,0:21:63.20:0,63,998	0/0:22,0:22:66.21:0,66,1051	0/0:18,0:18:54.17:0,54,853	0/0:15,0:15:42.14:0,42,684	0/0:19,0:19:57.19:0,57,927	0/0:21,0:21:63.22:0,63,1028	1/1:2,14:16:42.09:541,42,0	0/0:19,0:19:57.19:0,57,930	0/0:16,0:16:42.12:0,42,655	0/0:22,0:22:63.21:0,63,1016
chr10	44007166	.	C	CTGCTCCT	6607.14	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=11.187;DP=540;FS=0.478;HRun=0;HaplotypeScore=167.7311;InbreedingCoeff=0.8540;MQ=78.30;MQ0=0;MQRankSum=-12.799;QD=58.99;ReadPosRankSum=-0.994;VQSLOD=4.5983;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:90.31:0,90,2426	1/1:2,1:3:6.02:171,6,0	0/0:15,0:15:15.83:0,16,1071	0/0:15,0:15:43.70:0,44,1140	0/0:24,0:24:66.21:0,66,1724	0/0:24,0:24:72.25:0,72,1940	0/0:26,0:26:75.24:0,75,2011	1/1:17,13:30:84.22:2642,84,0	0/0:20,0:20:57.20:0,57,1575	1/1:6,10:17:45.15:1415,45,0	1/1:4,4:8:6.02:205,6,0	0/0:19,0:19:57.18:0,57,1496	0/0:14,0:14:42.14:0,42,1119	0/0:25,0:25:72.25:0,72,1964	0/0:22,0:22:63.19:0,63,1612	0/0:24,0:24:69.24:0,69,1872	1/1:3,10:13:27.09:801,27,0	0/0:18,0:18:54.19:0,54,1510	0/0:19,0:19:57.20:0,57,1514	0/0:22,0:22:66.21:0,66,1760	0/0:17,0:17:51.18:0,51,1399	0/0:15,0:15:45.13:0,45,1194	0/0:19,0:19:57.18:0,57,1522	0/0:21,0:21:63.22:0,63,1761	1/1:7,13:21:44.82:1329,45,0	0/1:20,0:20:43.58:44,0,1532	0/0:16,0:16:45.09:0,45,1132	0/0:22,0:22:66.20:0,66,1708
chr10	44007190	.	A	AAT	5696.93	PASS	AB=0.748;AC=18;AF=0.321;AN=56;BaseQRankSum=-8.214;DP=601;FS=5.684;HRun=0;HaplotypeScore=158.4749;InbreedingCoeff=0.4453;MQ=63.69;MQ0=0;MQRankSum=1.415;QD=20.57;ReadPosRankSum=-2.071;VQSLOD=4.5899;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,26:35:72.25:1181,72,0	1/1:17,0:17:3.65:42,4,0	0/0:6,0:6:2.22:0,2,7	0/1:10,0:10:4.29:4,0,22	1/1:6,18:24:19.99:849,20,0	0/0:27,0:27:69.20:0,69,843	0/0:19,0:19:45.14:0,45,558	1/1:48,0:48:30.71:224,31,0	0/0:24,0:24:57.17:0,57,694	0/1:32,0:32:13.36:36,0,13	0/0:17,0:17:2.11:0,2,25	0/0:17,0:17:51.16:0,51,632	0/0:15,0:15:33.10:0,33,409	0/0:20,0:20:48.15:0,48,595	0/0:21,0:21:54.17:0,54,670	0/0:21,0:22:60.01:0,60,709	0/0:17,0:17:6.44:0,6,25	0/0:22,0:22:45.14:0,45,558	0/1:6,17:23:17.23:779,0,17	0/1:7,11:19:38.26:456,0,38	0/1:5,5:10:19.14:228,0,19	0/0:16,0:16:36.11:0,36,446	0/0:21,0:21:51.16:0,51,632	0/0:16,0:17:35.93:0,36,410	0/0:43,0:43:17.91:0,18,84	1/1:7,16:23:49.70:759,50,0	1/1:3,17:21:16.97:776,17,0	0/1:6,8:14:44.31:363,0,44
chr10	44007967	.	AG	A	5191.70	PASS	AB=0.895;AC=13;AF=0.232;AN=56;BaseQRankSum=15.108;DP=602;FS=5.806;HRun=1;HaplotypeScore=76.7781;InbreedingCoeff=0.8966;MQ=83.73;MQ0=0;MQRankSum=-2.131;QD=35.32;ReadPosRankSum=-1.934;VQSLOD=4.0167;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,114,1815	1/1:0,6:6:15.05:210,15,0	0/0:23,0:23:69.21:0,69,1046	0/0:30,0:30:84.23:0,84,1241	0/0:18,0:18:54.18:0,54,856	0/0:21,0:21:63.21:0,63,1007	0/0:22,0:22:66.21:0,66,1032	1/1:0,30:30:87.29:1217,87,0	0/0:22,0:22:66.21:0,66,1032	1/1:0,20:20:60.20:839,60,0	1/1:0,15:15:45.15:629,45,0	0/0:28,0:28:84.29:0,84,1343	0/0:23,0:23:69.24:0,69,1103	0/0:16,0:16:48.16:0,48,767	0/0:20,0:20:60.20:0,60,944	0/0:24,0:24:72.25:0,72,1143	1/1:0,42:42:99:1593,114,0	0/0:23,0:23:69.24:0,69,1103	0/0:19,0:19:57.19:0,57,898	0/0:12,0:12:36.12:0,36,575	0/0:29,0:29:87.30:0,87,1379	0/0:15,0:15:45.15:0,45,719	0/0:14,0:14:42.14:0,42,671	0/0:23,0:23:69.24:0,69,1103	1/1:0,17:17:48.16:671,48,0	0/1:15,2:17:32.76:33,0,667	0/0:24,0:24:72.25:0,72,1148	0/0:11,0:11:33.11:0,33,527
chr10	44008170	.	CT	C	2583.08	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=13.781;DP=555;FS=20.283;HRun=2;HaplotypeScore=69.1920;InbreedingCoeff=0.9891;MQ=88.45;MQ0=0;MQRankSum=-4.188;QD=23.92;ReadPosRankSum=0.741;VQSLOD=2.1968;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:93.32:0,93,1394	1/1:1,4:5:12:131,12,0	0/0:25,0:25:75.25:0,75,1097	0/0:20,0:20:60.18:0,60,837	0/0:24,0:24:68.78:0,69,938	0/0:23,0:23:69.22:0,69,1015	0/0:23,0:23:69.23:0,69,1034	1/1:9,18:27:54:610,54,0	0/0:17,0:17:48.16:0,48,719	1/1:4,20:24:60.08:719,60,0	1/1:2,6:8:15.04:175,15,0	0/0:24,0:24:72.24:0,72,1079	0/0:16,0:16:48.15:0,48,699	0/0:12,0:12:36.12:0,36,540	0/0:17,0:17:51.17:0,51,753	0/0:21,0:21:63.20:0,63,924	1/1:4,28:32:72.22:892,72,0	0/0:18,0:18:51.17:0,51,760	0/0:18,0:18:51.16:0,51,745	0/0:20,0:20:57.17:0,57,814	0/0:14,0:14:42.13:0,42,607	0/0:18,0:18:54.17:0,54,789	0/0:19,0:19:54.18:0,54,800	0/0:25,0:25:72.24:0,72,1076	1/1:6,6:12:21.02:242,21,0	0/0:26,0:26:72.23:0,72,1056	0/0:28,0:28:81.26:0,81,1188	0/0:8,0:8:24.08:0,24,339
chr10	44008257	.	CT	C	4732.31	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=15.749;DP=609;FS=2.153;HRun=1;HaplotypeScore=77.1499;InbreedingCoeff=0.9999;MQ=75.14;MQ0=0;MQRankSum=-5.502;QD=38.16;ReadPosRankSum=1.600;VQSLOD=5.5538;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:54.17:0,54,822	1/1:0,16:16:45.15:628,45,0	0/0:17,0:17:51.01:0,51,682	0/0:24,0:23:59.78:0,60,839	0/0:31,0:31:92.94:0,93,1350	0/0:32,0:32:96.30:0,96,1456	0/0:24,0:24:72.18:0,72,1030	1/1:0,21:21:63.11:798,63,0	0/0:21,0:21:63.21:0,63,986	1/1:0,24:24:72.24:1006,72,0	1/1:0,18:18:48.16:669,48,0	0/0:23,0:23:69.22:0,69,1056	0/0:14,0:14:42.10:0,42,610	0/0:18,0:18:54.18:0,54,845	0/0:20,0:20:60.18:0,60,895	0/0:25,0:25:75.26:0,75,1171	1/1:2,15:17:47.63:610,48,0	0/0:24,0:24:72.25:0,72,1126	0/0:20,0:20:57.18:0,57,852	0/0:32,0:32:96.33:0,96,1499	0/0:13,0:13:39.13:0,39,610	0/0:22,0:22:66.20:0,66,988	0/0:19,0:19:54.15:0,54,801	0/0:20,0:20:54.17:0,54,819	1/1:1,27:28:78.12:1022,78,0	0/0:26,1:27:39.29:0,39,1117	0/0:30,0:29:90.28:0,90,1361	0/0:10,0:10:30.10:0,30,468
chr10	44008645	.	CTTAG	C	4045.55	PASS	AB=0.529;AC=11;AF=0.196;AN=56;BaseQRankSum=13.273;DP=687;FS=8.745;HRun=0;HaplotypeScore=112.1485;InbreedingCoeff=0.8795;MQ=66.10;MQ0=5;MQRankSum=-6.660;QD=38.53;ReadPosRankSum=3.415;VQSLOD=3.2756;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:72.25:0,72,1883	1/1:2,11:13:33.11:611,33,0	0/0:20,0:17:42.14:0,42,1103	0/0:17,0:13:36.10:0,36,824	0/0:28,0:28:81.28:0,81,2128	0/0:21,0:21:60.18:0,60,1488	0/0:35,0:33:90.31:0,90,2375	1/1:5,5:8:12.03:192,12,0	0/0:27,0:27:75.26:0,75,1992	1/1:5,14:17:36.12:672,36,0	1/1:3,16:18:36.12:658,36,0	0/0:28,0:28:81.28:0,81,2143	0/0:28,0:28:72.25:0,72,1918	0/0:26,0:26:78.27:0,78,2081	0/0:31,0:31:93.29:0,93,2317	0/0:29,0:29:84.29:0,84,2198	0/1:2,16:18:37.66:686,0,38	0/0:32,0:32:96.33:0,96,2500	0/0:14,0:13:36.12:0,36,947	0/0:27,0:27:72.25:0,72,1878	0/0:22,0:21:51.17:0,51,1319	0/0:25,0:25:72.25:0,72,1921	0/0:36,0:35:99:0,102,2658	0/0:32,0:32:87.30:0,87,2256	1/1:2,24:26:66.23:1227,66,0	0/0:29,0:29:81.27:0,81,2072	0/0:34,0:34:93.31:0,93,2401	0/0:13,0:13:30.10:0,30,763
chr10	44008939	.	C	CACCTCCTAATAGTGCCATTCCCTGTGCCAA	20999.05	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=6.023;DP=807;FS=1.772;HRun=0;HaplotypeScore=563.7202;InbreedingCoeff=0.8958;MQ=72.99;MQ0=3;MQRankSum=-14.026;QD=132.07;ReadPosRankSum=-1.615;VQSLOD=3.6926;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:59,0:58:99:0,166,10605	1/1:10,0:10:27.09:2996,27,0	0/0:26,0:25:65.20:0,65,2658	0/0:33,0:32:89.77:0,90,3719	0/0:27,0:27:78.22:0,78,4640	0/0:19,0:19:48.16:0,48,2997	0/0:30,0:29:84.22:0,84,4730	1/1:21,0:17:23.51:1627,24,0	0/0:23,0:23:66.23:0,66,5169	1/1:35,0:34:93.28:7291,93,0	1/1:17,0:16:42.09:2454,42,0	0/0:31,0:31:93.25:0,93,5932	0/0:31,0:31:93.27:0,93,5919	0/0:37,0:37:99:0,111,7218	0/0:36,0:36:99:0,105,6306	0/0:25,0:25:75.26:0,75,5244	1/1:27,1:28:66.09:4878,66,0	0/0:29,0:29:81.26:0,81,4905	0/0:20,0:19:57.15:0,57,2697	0/0:22,0:22:66.23:0,66,4341	0/0:61,0:59:99:0,169,10823	0/0:31,0:31:93.32:0,93,6866	0/0:24,0:24:69.20:0,69,4084	0/0:46,0:46:99:0,132,8221	1/1:5,4:14:15.05:1430,15,0	0/1:33,0:33:99:323,0,5697	0/0:28,0:28:81.26:0,81,5406	0/0:10,0:10:30.06:0,30,1424
chr10	44009287	.	C	CCCTCTGTCTCT	15535.46	PASS	AB=0.970;AC=13;AF=0.232;AN=56;BaseQRankSum=0.092;DP=659;FS=1.698;HRun=0;HaplotypeScore=202.0218;InbreedingCoeff=0.8979;MQ=72.88;MQ0=6;MQRankSum=-14.956;QD=88.77;ReadPosRankSum=-2.362;VQSLOD=4.1297;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:90.29:0,90,3031	1/1:6,6:11:30.10:1587,30,0	0/0:16,0:16:39.13:0,39,1048	0/0:18,0:18:47.15:0,47,922	0/0:22,0:22:66.23:0,66,2108	0/0:30,0:30:81.26:0,81,2525	0/0:23,0:23:69.24:0,69,2359	1/1:28,9:40:99:4646,114,0	0/0:21,0:21:60.21:0,60,1868	1/1:18,17:40:99:4647,105,0	1/1:3,10:14:33.11:1847,33,0	0/0:17,0:17:45.15:0,45,1574	0/0:20,0:20:57.20:0,57,2000	0/0:23,0:23:63.22:0,63,2005	0/0:37,0:37:99:0,111,3525	0/0:20,0:20:57.13:0,57,1999	1/1:12,6:20:39.13:1886,39,0	0/0:19,0:19:57.20:0,57,1774	0/0:25,0:25:69.20:0,69,2169	0/0:27,0:27:72.25:0,72,2214	0/0:30,0:30:78.25:0,78,2380	0/0:19,0:19:54.19:0,54,1851	0/0:20,0:20:54.16:0,54,1743	0/0:35,0:35:99:0,105,3536	1/1:4,6:12:18.06:849,18,0	0/1:31,1:32:75.25:75,0,2993	0/0:20,0:20:57.20:0,57,1940	0/0:10,0:10:30.10:0,30,1002
chr10	44009596	.	G	GAC	5792.20	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=2.019;DP=671;FS=5.284;HRun=0;HaplotypeScore=85.4815;InbreedingCoeff=0.9997;MQ=93.10;MQ0=0;MQRankSum=-3.799;QD=47.09;ReadPosRankSum=-1.607;VQSLOD=5.1497;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:87.29:0,87,1177	1/1:0,9:9:27.09:473,27,0	0/0:31,0:32:66.22:0,66,893	0/0:28,0:27:48.10:0,48,610	0/0:26,0:26:78.26:0,78,1053	0/0:17,0:17:45.15:0,45,609	0/0:27,0:27:78.26:0,78,1055	1/1:2,30:32:90.29:1547,90,0	0/0:26,0:26:72.24:0,72,972	1/1:1,29:31:81.28:1419,81,0	1/1:1,15:16:42.14:734,42,0	0/0:24,0:24:72.24:0,72,974	0/0:18,0:18:48.14:0,48,633	0/0:21,0:21:54.18:0,54,731	0/0:33,0:33:90.30:0,90,1218	0/0:28,0:28:75.23:0,75,999	1/1:0,18:18:51.17:894,51,0	0/0:22,0:22:63.21:0,63,851	0/0:14,0:14:42.14:0,42,565	0/0:26,0:26:75.24:0,75,999	0/0:36,0:36:99:0,102,1379	0/0:19,0:19:57.19:0,57,770	0/0:22,0:22:63.20:0,63,837	0/0:16,0:16:45.15:0,45,609	1/1:3,14:17:42.14:726,42,0	0/0:30,1:31:31.64:0,32,1016	0/0:37,0:37:99:0,108,1427	0/0:12,0:12:36.12:0,36,487
chr10	44009849	.	ATTTAT	A	5776.66	PASS	AB=0.944;AC=13;AF=0.232;AN=56;BaseQRankSum=15.532;DP=643;FS=1.290;HRun=0;HaplotypeScore=148.0672;InbreedingCoeff=0.8923;MQ=71.27;MQ0=0;MQRankSum=-11.496;QD=36.79;ReadPosRankSum=-2.184;VQSLOD=4.5885;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:81.28:0,81,2323	1/1:1,7:8:20.99:389,21,0	0/0:22,0:22:54.11:0,54,1250	0/0:9,0:9:22.84:0,23,533	0/0:34,0:34:96.32:0,96,2761	0/0:27,0:27:72.25:0,72,2129	0/0:19,0:19:54.17:0,54,1555	1/1:5,28:33:81.22:1545,81,0	0/0:23,0:23:69.24:0,69,2031	1/1:1,30:31:87.27:1705,87,0	1/1:4,13:17:36.04:683,36,0	0/0:19,0:19:51.16:0,51,1458	0/0:21,0:21:60.21:0,60,1781	0/0:22,0:22:63.22:0,63,1838	0/0:39,0:39:99:0,105,3130	0/0:24,0:24:63.22:0,63,1937	1/1:0,9:9:12.04:248,12,0	0/0:22,0:22:60.21:0,60,1695	0/0:18,0:18:54.19:0,54,1615	0/0:35,0:35:96.33:0,96,2819	0/0:12,0:12:33.11:0,33,1002	0/0:21,0:21:60.21:0,60,1841	0/0:17,0:17:51.17:0,51,1472	0/0:23,0:23:69.24:0,69,2035	1/1:4,21:25:57.20:1179,57,0	0/1:32,2:34:27.79:28,0,2464	0/0:35,0:33:99:0,99,2812	0/0:16,0:16:39.13:0,39,1171
chr10	44010480	.	GTA	G	11423.56	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=15.663;DP=640;FS=9.676;HRun=0;HaplotypeScore=136.3049;InbreedingCoeff=0.9938;MQ=82.86;MQ0=0;MQRankSum=-5.001;QD=39.39;ReadPosRankSum=6.341;VQSLOD=6.2323;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,111,2143	1/1:0,7:7:21.07:321,21,0	0/0:24,0:24:72.25:0,72,1347	0/0:15,0:15:45.15:0,45,853	0/0:32,0:31:63.22:0,63,1214	0/0:16,0:16:48.16:0,48,927	0/0:34,0:34:99:0,99,1871	1/1:0,14:14:42.14:642,42,0	0/0:30,0:30:90.31:0,90,1729	1/1:0,10:10:30.10:459,30,0	1/1:0,8:8:18.06:275,18,0	1/1:1,19:20:57.19:873,57,0	1/1:1,28:29:69.23:1047,69,0	1/1:1,28:29:81.28:1240,81,0	1/1:0,25:25:66.22:1010,66,0	1/1:0,12:12:27.09:413,27,0	1/1:0,27:27:75.25:1148,75,0	1/1:1,17:18:48.16:735,48,0	0/0:15,0:15:45.15:0,45,853	0/0:20,0:20:57.20:0,57,1100	0/0:67,0:67:99:0,199,3777	1/1:0,18:17:36.01:551,36,0	1/1:0,7:7:12.04:184,12,0	1/1:1,49:50:99:1838,121,0	1/1:0,16:16:45.15:688,45,0	0/0:26,0:26:78.27:0,78,1492	0/0:23,0:23:69.20:0,69,1255	0/0:11,0:11:33.11:0,33,637
chr10	44010774	.	G	GCA	2596.58	PASS	AB=0.608;AC=12;AF=0.261;AN=46;BaseQRankSum=4.815;DP=492;FS=8.690;HRun=0;HaplotypeScore=77.1906;InbreedingCoeff=0.5113;MQ=48.81;MQ0=30;MQRankSum=-5.250;QD=16.13;ReadPosRankSum=-2.720;VQSLOD=2.0631;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:14,30:34:19.10:720,0,19	0/0:2,0:1:2.88:0,3,15	0/0:25,0:9:12.03:0,12,140	0/0:35,0:12:30.09:0,30,361	0/1:5,12:12:15.44:269,0,15	0/0:21,0:21:51.16:0,51,622	0/0:30,1:30:54.15:0,54,647	./.	0/0:12,0:11:30.09:0,30,366	./.	./.	0/0:22,0:22:39.10:0,39,463	0/0:24,0:23:54.17:0,54,660	0/0:26,0:26:66.21:0,66,806	0/0:32,0:31:75.22:0,75,904	0/0:15,0:14:24.08:0,24,293	./.	0/0:24,0:23:60.10:0,60,697	1/1:15,5:18:26.98:347,27,0	0/1:8,14:15:12.55:294,0,13	0/1:9,11:16:12.57:316,0,13	0/0:20,0:20:48.14:0,48,575	0/0:13,0:11:24.08:0,24,293	0/0:25,0:25:47.90:0,48,564	./.	1/1:4,13:16:30.10:480,30,0	1/1:4,6:9:12.04:183,12,0	1/1:4,4:6:9.03:146,9,0
chr10	44011440	.	A	AAAAAAAC	2927.30	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=10.032;DP=616;FS=69.596;HRun=0;HaplotypeScore=144.9844;InbreedingCoeff=0.9188;MQ=62.85;MQ0=0;MQRankSum=-9.951;QD=71.40;ReadPosRankSum=-3.420;VQSLOD=1.0895;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:96.27:0,96,2219	1/1:1,0:1:2.97:20,3,0	0/0:7,0:7:15.04:0,15,309	0/0:5,0:5:6.02:0,6,146	0/0:39,0:39:99:0,111,2700	0/0:20,0:20:39.13:0,39,951	0/0:20,0:20:45.15:0,45,1097	1/1:10,1:11:27.53:817,28,0	0/0:25,0:25:57.19:0,57,1374	1/1:7,5:13:33.17:1011,33,0	1/1:3,2:5:12.04:451,12,0	0/0:32,0:32:63.21:0,63,1520	0/0:23,0:23:56.64:0,57,1337	0/0:28,0:28:60.18:0,60,1408	0/0:30,0:30:48.14:0,48,1120	0/0:30,0:30:69.21:0,69,1609	1/1:2,0:8:18.06:506,18,0	0/0:16,0:16:36.12:0,36,862	0/0:33,0:33:81.26:0,81,1915	0/0:35,0:35:92.71:0,93,2261	0/0:18,0:18:48.12:0,48,1070	0/0:24,0:24:66.23:0,66,1609	0/0:23,0:23:51.17:0,51,1244	0/0:33,0:32:84.24:0,84,1947	1/1:1,2:3:9.03:297,9,0	0/0:26,0:26:78.27:0,78,1902	0/0:42,0:41:99:0,108,2526	0/0:21,0:21:60.21:0,60,1449
chr10	44011593	.	CT	C	1199	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.012;DP=737;FS=0.639;HRun=2;HaplotypeScore=81.7715;InbreedingCoeff=0.9909;MQ=75.38;MQ0=0;MQRankSum=-1.219;QD=33.31;ReadPosRankSum=0.811;VQSLOD=3.6975;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,151,2245	1/1:0,9:9:27.09:350,27,0	0/0:20,0:20:50.01:0,50,754	0/0:20,0:19:27.48:0,27,553	0/0:33,0:33:54.18:0,54,809	0/0:25,0:25:75.24:0,75,1103	0/0:25,0:25:72.24:0,72,1077	0/0:29,0:29:84.28:0,84,1242	0/0:26,0:26:75.25:0,75,1124	0/0:29,0:29:81.27:0,81,1191	0/0:24,0:24:72.24:0,72,1076	0/0:29,0:29:84.28:0,84,1259	0/0:26,0:26:78.25:0,78,1148	0/0:30,0:30:90.30:0,90,1344	0/0:24,0:24:72.24:0,72,1079	0/0:27,0:27:75.23:0,75,1084	1/1:0,27:27:75.24:970,75,0	0/0:21,0:21:63.21:0,63,937	0/0:26,0:26:75.25:0,75,1123	0/0:19,0:19:57.17:0,57,815	0/0:22,0:22:63.20:0,63,921	0/0:31,0:31:60.19:0,60,880	0/0:29,0:29:78.25:0,78,1149	0/0:28,0:28:84.27:0,84,1235	0/0:26,0:26:78.20:0,78,1119	0/0:29,0:29:84.28:0,84,1257	0/0:41,0:40:99:0,114,1707	0/0:11,0:11:15.05:0,15,225
chr10	44011767	.	C	CAAGGTAACAAGGTTT	11682.05	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=-5.902;DP=697;FS=6.207;HRun=0;HaplotypeScore=264.0682;InbreedingCoeff=0.8821;MQ=84.31;MQ0=0;MQRankSum=-11.293;QD=104.30;ReadPosRankSum=-2.360;VQSLOD=3.7095;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:48:99:0,144,6392	1/1:0,2:4:9.03:675,9,0	0/0:21,0:20:57.65:0,58,1880	0/0:25,0:25:66.15:0,66,2415	0/0:46,0:46:99:0,135,5921	0/0:22,0:22:66.23:0,66,3004	0/0:36,0:36:99:0,108,4706	1/1:2,1:17:51.16:2508,51,0	0/0:25,0:25:75.24:0,75,3376	1/1:1,12:28:75.24:4438,75,0	1/1:3,5:15:21.07:1306,21,0	0/0:32,0:32:93.32:0,93,3984	0/0:21,0:21:60.21:0,60,2706	0/0:18,0:18:54.17:0,54,2165	0/0:30,0:30:84.29:0,84,3873	0/0:23,0:23:66.23:0,66,2778	1/1:3,6:16:24.08:1821,24,0	0/0:13,0:13:39.13:0,39,1732	0/0:26,0:26:69.24:0,69,3068	0/0:37,0:37:99:0,111,4672	0/0:42,0:42:99:0,123,5124	0/0:35,0:35:99:0,105,4657	0/0:18,0:18:51.18:0,51,2375	0/0:23,0:23:69.19:0,69,3008	1/1:0,4:6:12.04:917,12,0	0/1:26,0:26:16.57:17,0,3087	0/0:35,0:34:99:0,99,4215	0/0:8,0:8:24.08:0,24,1116
chr10	44012196	.	CTCTTCCTATTCCTCTTCT	C	4707.66	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=5.626;DP=413;FS=4.954;HRun=0;HaplotypeScore=196.6494;InbreedingCoeff=0.8368;MQ=67.59;MQ0=6;MQRankSum=-8.476;QD=61.14;ReadPosRankSum=-2.062;VQSLOD=3.9335;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:63.22:0,63,4493	1/1:5,1:6:9.03:377,9,0	0/0:36,0:14:26.95:0,27,496	0/0:39,0:22:9.96:0,10,609	0/0:10,0:10:24.08:0,24,1508	0/0:9,0:9:18.06:0,18,985	0/0:19,0:19:54.17:0,54,2937	0/1:14,0:14:73.66:451,0,74	0/0:12,0:12:27.09:0,27,1309	1/1:11,1:12:15.05:475,15,0	1/1:7,2:9:20.47:351,20,0	0/0:15,0:15:39.12:0,39,2411	0/0:9,0:8:21.07:0,21,1344	0/0:15,0:15:30.10:0,30,2013	0/0:18,0:18:48.16:0,48,3173	0/0:10,0:10:27.09:0,27,1681	1/1:18,1:18:39.13:1287,39,0	0/0:7,0:7:12.04:0,12,936	0/0:7,0:6:9.02:0,9,430	0/0:12,0:12:30.10:0,30,1351	0/0:19,0:19:42.14:0,42,3177	0/0:11,0:11:30.10:0,30,1591	0/0:7,0:7:21.07:0,21,1171	0/0:16,0:16:45.11:0,45,2879	1/1:7,10:17:45.09:1766,45,0	0/0:16,0:16:48.15:0,48,3124	0/0:12,0:12:30.10:0,30,1920	0/0:12,0:12:33.11:0,33,1955
chr10	44012203	.	T	TC	388.43	PASS	AB=0.786;AC=5;AF=0.089;AN=56;BaseQRankSum=5.164;DP=371;FS=12.554;HRun=2;HaplotypeScore=86.6192;InbreedingCoeff=-0.1037;MQ=70.82;MQ0=4;MQRankSum=-3.881;QD=6.81;ReadPosRankSum=-0.095;VQSLOD=-0.5043;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:63.21:0,63,881	0/0:3,0:3:8.01:0,8,52	0/0:32,0:11:32.95:0,33,382	0/0:38,0:22:43.02:0,43,389	0/0:8,0:8:24.08:0,24,334	0/0:7,0:7:18.06:0,18,251	0/0:20,0:20:57.18:0,57,777	0/1:7,2:9:85.90:86,0,96	0/0:9,0:9:27.09:0,27,377	0/1:6,2:8:48.51:49,0,74	0/1:5,3:8:27.47:27,0,41	0/0:14,0:14:39.12:0,39,528	0/0:8,0:7:21.07:0,21,294	0/0:10,0:10:30.10:0,30,418	0/0:20,0:20:40.12:0,40,693	0/0:9,0:9:27.09:0,27,377	0/1:9,7:16:53.73:236,0,54	0/0:5,0:5:15.05:0,15,210	0/0:6,0:5:12.03:0,12,153	0/0:10,0:10:30.10:0,30,419	0/0:17,0:17:42.14:0,42,587	0/0:10,0:10:30.10:0,30,419	0/0:9,0:9:27.09:0,27,367	0/0:16,0:16:45.11:0,45,607	0/1:14,2:16:65.90:108,0,66	0/0:16,0:16:48.15:0,48,655	0/0:10,0:10:30.10:0,30,419	0/0:12,0:12:33.11:0,33,462
chr10	44012236	.	CA	C	2042.79	PASS	AB=0.987;AC=20;AF=0.357;AN=56;BaseQRankSum=8.173;DP=316;FS=6.509;HRun=1;HaplotypeScore=89.1543;InbreedingCoeff=0.3812;MQ=77.30;MQ0=2;MQRankSum=-8.111;QD=12.69;ReadPosRankSum=0.985;VQSLOD=2.2751;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,1:18:26.92:0,27,215	1/1:1,5:6:15.03:157,15,0	0/1:23,3:17:6.51:7,0,408	0/0:25,3:15:1.79:0,2,42	0/1:10,0:10:28.34:39,0,28	0/0:6,0:6:5.51:0,6,36	0/0:11,0:11:24.25:0,24,115	1/1:6,11:17:42.09:431,42,0	0/1:9,0:9:22.36:22,0,70	1/1:5,12:17:44.66:401,45,0	1/1:0,9:9:27.06:280,27,0	0/1:11,0:11:0.17:0,0,81	0/0:13,0:12:26.34:0,26,145	0/0:10,0:10:12.75:0,13,115	0/0:18,0:18:17.46:0,17,177	0/1:8,0:8:5.75:6,0,94	1/1:2,14:16:41.81:408,42,0	0/0:5,0:5:10.91:0,11,67	0/0:7,0:6:9.43:0,9,50	0/0:6,0:6:14.41:0,14,80	0/0:12,0:12:8.60:0,9,135	0/1:4,0:4:18.17:18,0,19	0/0:7,0:7:17.44:0,17,114	0/0:8,0:8:17.21:0,17,89	1/1:0,14:14:42.09:438,42,0	0/1:11,0:11:4.40:4,0,68	0/0:6,0:6:12.01:0,12,59	0/1:3,0:3:16.08:16,0,21
chr10	44012240	.	TCCCC	T	610.90	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=7.181;DP=326;FS=10.249;HRun=6;HaplotypeScore=112.6187;InbreedingCoeff=0.8369;MQ=75.35;MQ0=2;MQRankSum=-6.945;QD=9.55;ReadPosRankSum=1.412;VQSLOD=-0.3919;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:44.59:0,45,1111	0/0:6,0:6:7.22:0,7,108	0/0:26,0:19:50.81:0,51,778	0/0:23,0:12:14.53:0,15,243	0/0:7,0:7:12.02:0,12,199	0/0:6,0:6:15.05:0,15,352	0/0:12,0:12:30.05:0,30,548	1/1:17,4:21:38.88:323,39,0	0/0:10,0:10:24.07:0,24,508	1/1:17,2:19:27.42:302,27,0	1/1:10,0:10:4.90:102,5,0	0/0:11,0:11:30.03:0,30,612	0/0:14,0:13:35.67:0,36,647	0/0:10,0:10:27.05:0,27,492	0/0:16,0:18:16.84:0,17,1005	0/0:8,0:8:21.06:0,21,444	0/0:18,0:17:17.01:0,17,467	0/0:6,0:6:18.04:0,18,341	0/0:8,0:7:10.66:0,11,296	0/0:8,0:8:21.02:0,21,433	0/0:11,0:11:33.10:0,33,816	0/0:3,0:3:9.02:0,9,132	0/0:8,0:8:21.07:0,21,472	0/0:10,0:10:24.07:0,24,457	1/1:14,0:14:8.10:30,8,0	0/0:8,0:8:24.08:0,24,582	0/0:6,0:6:18.04:0,18,378	0/0:2,0:2:6.02:0,6,99
chr10	44012372	.	T	TACAC	1366.16	PASS	AB=0.899;AC=32;AF=0.593;AN=54;BaseQRankSum=3.516;DP=505;FS=7.164;HRun=0;HaplotypeScore=109.4026;InbreedingCoeff=0.3329;MQ=62.96;MQ0=15;MQRankSum=-1.959;QD=3.47;ReadPosRankSum=-2.776;VQSLOD=1.0741;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:34:12.97:13,0,30	1/1:15,2:18:3.31:72,3,0	./.	0/1:25,0:17:0:0,0,0	0/0:14,0:14:9.02:0,9,115	0/1:14,0:19:10.64:11,0,18	1/1:10,0:16:5.12:24,5,0	1/1:20,0:18:12.44:138,12,0	1/1:4,0:10:11.14:53,11,0	1/1:21,5:25:19.78:281,20,0	1/1:15,0:15:12.01:166,12,0	0/0:11,0:10:15.03:0,15,208	0/0:13,0:13:9.01:0,9,117	0/1:10,0:11:4.85:5,0,180	1/1:16,1:26:11.13:137,11,0	0/1:21,0:21:55.14:55,0,61	0/1:27,0:28:6.01:6,0,112	1/1:7,0:15:8.75:66,9,0	1/1:9,0:11:5.62:27,6,0	1/1:16,0:15:11.94:90,12,0	0/1:42,0:41:12.06:284,0,12	0/0:11,0:11:9.01:0,9,104	0/0:10,0:9:6.02:0,6,78	0/0:31,0:30:18.04:0,18,254	1/1:10,8:19:2.93:70,3,0	1/1:10,0:10:5.82:33,6,0	0/0:7,0:7:6.02:0,6,93	0/1:3,0:7:3.30:7,0,3
chr10	44012836	.	CTT	C	2688.47	PASS	AB=0.871;AC=10;AF=0.179;AN=56;BaseQRankSum=10.371;DP=615;FS=20.204;HRun=12;HaplotypeScore=93.1672;InbreedingCoeff=0.7955;MQ=67.73;MQ0=0;MQRankSum=-1.535;QD=18.93;ReadPosRankSum=2.598;VQSLOD=1.1036;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:26:56.63:0,57,730	0/0:0,0:9:19.96:0,20,70	0/1:8,0:8:21.74:22,0,43	0/1:13,2:14:1.91:2,0,146	0/0:17,0:19:42.10:0,42,600	0/0:26,0:28:77.21:0,77,1043	0/0:19,0:20:60.18:0,60,857	1/1:10,24:35:59.76:662,60,0	0/0:23,0:25:62.15:0,62,803	1/1:5,33:37:99:1000,99,0	1/1:3,15:18:48.02:475,48,0	0/0:22,0:23:62.66:0,63,842	0/0:22,0:23:54.18:0,54,797	0/0:17,0:17:48.11:0,48,666	0/0:27,0:29:81.22:0,81,1104	0/0:19,0:20:53.65:0,54,731	0/0:1,1:22:19.78:0,20,135	0/0:17,0:20:53.14:0,53,706	0/0:21,0:22:39.10:0,39,541	0/0:15,0:18:44.57:0,45,559	0/0:22,0:26:65.66:0,66,898	0/0:13,0:14:27.08:0,27,378	0/0:15,0:19:50.04:0,50,591	0/0:24,0:26:62.69:0,63,884	1/1:2,23:26:62.88:693,63,0	0/0:22,1:25:25.61:0,26,646	0/0:28,0:29:83.75:0,84,1181	0/0:13,0:13:24.06:0,24,333
chr10	44013683	.	ACACACACACACACG	A	822.57	PASS	AB=0.956;AC=15;AF=0.395;AN=38;BaseQRankSum=5.936;DP=267;FS=0.000;HRun=0;HaplotypeScore=124.9722;InbreedingCoeff=0.0309;MQ=41.02;MQ0=27;MQRankSum=-4.792;QD=6.38;ReadPosRankSum=0.721;VQSLOD=2.3739;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:19,0:17:18.22:53,0,18	./.	./.	./.	0/1:11,0:11:18.94:19,0,83	0/0:15,0:15:17.15:0,17,637	0/0:24,0:24:40.92:0,41,959	./.	0/0:36,0:35:52.98:0,53,1749	./.	./.	1/1:6,1:7:11.96:247,12,0	0/1:14,1:13:1.24:259,0,1	0/1:8,1:7:5.98:17,0,6	0/0:9,0:7:3.01:0,3,71	0/1:11,0:11:2.98:3,0,336	1/1:2,0:1:3.01:102,3,0	0/0:13,0:9:9.90:0,10,117	0/1:8,0:5:12.07:31,0,12	./.	0/0:13,0:9:2.86:0,3,75	0/1:12,2:13:0:0,0,0	./.	1/1:13,0:13:2.30:23,2,0	./.	0/1:12,0:7:75.08:126,0,75	0/1:7,1:7:66.43:66,0,100	0/0:7,0:4:12.04:0,12,255
chr10	44013685	.	ACACACACACACG	A	1071.24	PASS	AB=0.979;AC=18;AF=0.474;AN=38;BaseQRankSum=5.580;DP=270;FS=3.225;HRun=0;HaplotypeScore=113.8021;InbreedingCoeff=0.2988;MQ=41.07;MQ0=28;MQRankSum=-4.634;QD=9.40;ReadPosRankSum=0.584;VQSLOD=2.3186;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:17:2.97:77,3,0	./.	./.	0/0:4,0:1:2.84:0,3,14	0/1:10,1:11:37.18:42,0,37	0/0:17,0:17:20.23:0,20,558	0/0:25,0:25:40.43:0,40,774	./.	0/0:36,0:35:56.05:0,56,1509	./.	./.	1/1:6,1:7:11.97:279,12,0	1/1:14,1:13:17.73:287,18,0	1/1:6,3:7:3.01:35,3,0	0/0:9,0:7:3.01:0,3,47	0/1:10,0:10:6.37:6,0,258	1/1:2,0:1:3.01:88,3,0	0/0:13,0:9:9.75:0,10,61	1/1:8,0:5:4.44:39,4,0	./.	0/0:12,0:8:2.88:0,3,50	./.	./.	1/1:12,1:13:2.65:48,3,0	./.	0/1:12,0:7:11.92:197,0,12	0/1:8,0:7:22.47:110,0,22	0/0:7,0:4:11.83:0,12,188
chr10	44013687	.	ACACACACACG	A	1172.82	PASS	AB=1.000;AC=23;AF=0.575;AN=40;BaseQRankSum=4.674;DP=267;FS=3.203;HRun=0;HaplotypeScore=102.4551;InbreedingCoeff=0.5212;MQ=41.05;MQ0=27;MQRankSum=-5.364;QD=10.38;ReadPosRankSum=0.000;VQSLOD=1.8094;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:16:5.69:118,6,0	./.	1/1:2,0:1:2.04:6,2,0	0/0:4,0:1:2.84:0,3,14	1/1:8,3:11:2.75:72,3,0	0/0:16,0:16:20.78:0,21,459	0/0:26,0:26:43.19:0,43,606	./.	0/0:37,0:36:55.87:0,56,1287	./.	./.	1/1:7,0:7:11.97:263,12,0	1/1:14,0:12:17.74:250,18,0	1/1:9,0:7:2.92:17,3,0	0/0:9,0:7:2.98:0,3,23	0/1:10,0:10:11.46:11,0,206	1/1:2,0:1:3.01:74,3,0	0/0:11,0:9:2.84:0,3,10	1/1:7,0:4:5.95:42,6,0	./.	0/0:12,0:8:2.89:0,3,25	./.	./.	1/1:13,0:13:2.58:24,3,0	./.	1/1:10,2:7:9.03:268,9,0	1/1:8,0:7:11.97:172,12,0	0/0:7,0:4:8.89:0,9,65
chr10	44013693	.	ACAC	A	164.91	PASS	AB=1.000;AC=16;AF=0.400;AN=40;BaseQRankSum=4.824;DP=236;FS=17.184;HRun=0;HaplotypeScore=84.6808;InbreedingCoeff=0.3871;MQ=42.49;MQ0=26;MQRankSum=-3.603;QD=2.43;ReadPosRankSum=0.005;VQSLOD=0.2042;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:12,2:12:3.28:28,3,0	./.	0/1:7,0:5:4.84:5,0,59	0/0:6,0:1:3.01:0,3,40	1/1:7,0:7:2.49:9,2,0	0/0:16,0:16:21.07:0,21,355	0/0:29,0:29:56.88:0,57,795	./.	0/0:36,0:35:57.11:0,57,1048	./.	./.	1/1:4,1:5:6.64:63,7,0	0/1:9,0:7:15.81:38,0,16	0/0:5,1:5:1.25:0,1,3	0/0:8,0:6:2.99:0,3,23	0/0:9,0:9:10.39:0,10,166	1/1:2,0:1:2.99:23,3,0	0/0:10,0:7:2.92:0,3,8	0/0:6,0:3:1.80:0,2,16	./.	0/0:11,0:7:3.01:0,3,39	./.	./.	1/1:10,0:10:1.07:4,1,0	./.	1/1:7,1:3:9.01:85,9,0	1/1:5,1:5:4.51:38,5,0	0/0:6,0:3:6.68:0,7,22
chr10	44013695	.	ACG	A	441.48	PASS	AB=1.000;AC=24;AF=0.667;AN=36;BaseQRankSum=6.558;DP=230;FS=9.554;HRun=0;HaplotypeScore=72.3288;InbreedingCoeff=0.4449;MQ=41.88;MQ0=26;MQRankSum=-5.828;QD=4.24;ReadPosRankSum=1.012;VQSLOD=1.1039;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:11:3:25,3,0	./.	0/1:7,0:5:5.54:6,0,16	0/0:7,0:1:2.84:0,3,14	1/1:6,0:7:2.99:24,3,0	0/0:17,0:17:7.78:0,8,139	0/0:27,0:27:39.69:0,40,306	./.	0/0:24,10:33:53.10:0,53,493	./.	./.	1/1:5,0:5:11.89:86,12,0	1/1:7,0:7:17.69:118,18,0	./.	0/1:7,0:5:0:0,0,0	0/1:9,0:9:12.11:12,0,40	1/1:2,0:1:2.92:17,3,0	1/1:10,0:7:3.81:19,4,0	1/1:3,3:3:8.94:65,9,0	./.	./.	./.	./.	0/1:9,0:9:0:1,0,0	./.	1/1:8,0:3:8.98:74,9,0	1/1:5,0:5:8.91:69,9,0	1/1:6,0:3:8.84:55,9,0
chr10	44013702	.	C	CACAGAGAGAGAGAGAGAGAGAG	5589.90	PASS	AB=1.000;AC=36;AF=0.692;AN=52;BaseQRankSum=1.222;DP=331;FS=1.482;HRun=0;HaplotypeScore=163.0296;InbreedingCoeff=0.3575;MQ=44.67;MQ0=22;MQRankSum=-4.121;QD=27.95;ReadPosRankSum=-1.911;VQSLOD=3.6846;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:17:6.49:0,6,20	1/1:2,0:2:3.01:107,3,0	0/1:10,0:6:60.30:60,0,90	0/0:16,0:6:5.50:0,6,125	./.	0/0:17,0:17:23.82:0,24,808	0/0:22,0:26:52.43:0,52,2155	1/1:9,0:4:12.04:537,12,0	0/0:32,0:32:51:0,51,1950	1/1:8,0:7:12.04:414,12,0	0/1:3,0:2:0:0,0,0	0/1:7,0:7:6.65:302,0,7	0/1:14,0:13:7.82:497,0,8	1/1:14,0:12:9.01:174,9,0	1/1:9,0:8:2.71:50,3,0	1/1:9,0:9:17.83:307,18,0	1/1:9,0:9:17.51:663,18,0	1/1:4,3:7:6.02:467,6,0	1/1:10,0:6:15.05:507,15,0	1/1:10,0:9:3:25,3,0	1/1:14,0:11:6.01:74,6,0	./.	1/1:10,0:9:6.01:75,6,0	1/1:13,0:13:2.21:70,2,0	1/1:8,0:8:11.99:434,12,0	0/1:15,0:9:10.82:517,0,11	0/1:8,0:7:3.55:131,0,4	1/1:9,0:7:16.77:179,17,0
chr10	44014011	.	AT	A	2493.02	PASS	AB=0.923;AC=13;AF=0.232;AN=56;BaseQRankSum=15.029;DP=569;FS=1.312;HRun=9;HaplotypeScore=90.4933;InbreedingCoeff=0.9159;MQ=74.65;MQ0=0;MQRankSum=-3.157;QD=19.03;ReadPosRankSum=-1.917;VQSLOD=3.1353;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,135,1526	1/1:2,10:12:30.02:275,30,0	0/0:13,0:13:14.80:0,15,193	0/1:11,1:12:5.75:6,0,199	0/0:25,0:25:66.18:0,66,743	0/0:25,0:25:72.20:0,72,820	0/0:22,0:22:66.18:0,66,752	1/1:6,26:32:77.99:701,78,0	0/0:17,0:17:48.14:0,48,554	1/1:1,19:20:57.03:521,57,0	1/1:5,17:22:39:357,39,0	0/0:13,0:13:39.05:0,39,423	0/0:24,0:25:66.03:0,66,740	0/0:12,0:12:27.08:0,27,312	0/0:24,0:24:63.16:0,63,714	0/0:12,0:13:38.95:0,39,430	1/1:1,21:22:63.03:577,63,0	0/0:18,0:18:48.12:0,48,540	0/0:25,0:25:69.18:0,69,773	0/0:28,0:28:75.20:0,75,847	0/0:12,0:12:24.07:0,24,277	0/0:17,0:18:48.99:0,49,541	0/0:19,0:19:51.06:0,51,547	0/0:14,0:14:36.11:0,36,415	1/1:2,9:11:27.01:246,27,0	0/0:24,0:24:63.15:0,63,707	0/0:32,0:32:93.27:0,93,1064	0/0:13,0:13:39.08:0,39,429
chr10	44014063	.	AAC	A	2725.18	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=12.263;DP=596;FS=7.811;HRun=0;HaplotypeScore=98.0029;InbreedingCoeff=0.9927;MQ=83.07;MQ0=0;MQRankSum=-9.752;QD=30.97;ReadPosRankSum=-1.484;VQSLOD=4.7655;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,114,2051	0/0:5,0:5:15.05:0,15,270	0/0:24,0:24:60.20:0,60,1016	0/0:15,0:15:38.17:0,38,538	0/0:20,0:20:60.21:0,60,1079	0/0:20,0:20:57.20:0,57,1027	0/0:22,0:22:66.23:0,66,1178	1/1:8,29:37:78.21:1038,78,0	0/0:22,0:22:60.21:0,60,1079	1/1:2,20:22:60.20:839,60,0	1/1:2,18:20:51.11:673,51,0	0/0:12,0:12:36.12:0,36,648	0/0:24,0:24:69.24:0,69,1233	0/0:15,0:15:45.15:0,45,810	0/0:20,0:20:60.21:0,60,1081	0/0:17,0:17:48.16:0,48,853	0/0:19,0:19:51.17:0,51,903	0/0:16,0:16:45.15:0,45,810	0/0:26,0:26:78.27:0,78,1405	0/0:28,0:28:78.27:0,78,1403	0/0:11,0:11:33.11:0,33,594	0/0:21,0:21:57.20:0,57,1027	0/0:24,0:24:66.23:0,66,1177	0/0:19,0:19:54.18:0,54,961	1/1:1,8:9:24.08:335,24,0	0/0:20,2:22:18.19:0,18,983	0/0:40,0:40:99:0,111,1968	0/0:26,0:26:75.26:0,75,1350
chr10	44014128	.	T	TG	6231.88	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=9.037;DP=656;FS=12.449;HRun=1;HaplotypeScore=72.9371;InbreedingCoeff=0.9980;MQ=75.96;MQ0=0;MQRankSum=-2.259;QD=42.11;ReadPosRankSum=-0.028;VQSLOD=4.1191;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:93.28:0,93,1190	1/1:0,6:6:18.06:269,18,0	0/0:16,0:16:38.37:0,38,519	0/0:12,0:12:36.05:0,36,389	0/0:35,0:35:99:0,105,1349	0/0:30,0:30:84.27:0,84,1091	0/0:25,0:24:75.20:0,75,937	1/1:1,29:30:87.27:1263,87,0	0/0:19,0:19:54.18:0,54,700	1/1:1,31:32:96.30:1399,96,0	1/1:2,24:26:75.25:1098,75,0	0/0:13,0:13:39.11:0,39,492	0/0:27,0:27:72.22:0,72,921	0/0:12,0:12:33.11:0,33,428	0/0:25,0:25:72.23:0,72,935	0/0:18,0:18:54.18:0,54,701	1/1:1,34:35:96.33:1438,96,0	0/0:13,0:13:36.12:0,36,467	0/0:30,0:30:87.27:0,87,1115	0/0:28,0:28:78.21:0,78,987	0/0:9,0:9:27.08:0,27,338	0/0:25,0:25:75.23:0,75,961	0/0:28,0:28:84.27:0,84,1089	0/0:31,0:31:90.28:0,90,1153	1/1:2,17:19:51.17:764,51,0	0/0:27,2:29:33.27:0,33,917	0/0:28,0:28:84.26:0,84,1075	0/0:20,0:20:57.14:0,57,708
chr10	44014716	.	C	CGT	249.74	PASS	AB=0.896;AC=9;AF=0.161;AN=56;BaseQRankSum=6.357;DP=559;FS=32.472;HRun=0;HaplotypeScore=98.4889;InbreedingCoeff=0.4212;MQ=69.92;MQ0=5;MQRankSum=-1.698;QD=2.08;ReadPosRankSum=-3.354;VQSLOD=-0.6824;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:79.92:0,80,920	0/1:10,0:11:6.74:65,0,7	0/0:26,0:17:42.07:0,42,525	0/0:26,0:15:29.98:0,30,350	0/0:15,0:15:25.90:0,26,332	0/1:24,0:24:56.46:56,0,334	0/0:21,0:21:27.09:0,27,365	0/1:20,0:20:2.14:28,0,2	0/0:11,0:11:15.52:0,16,202	0/1:18,0:18:30.09:41,0,30	1/1:12,0:12:9.19:56,9,0	0/0:20,0:20:48.16:0,48,645	0/0:18,0:18:51.13:0,51,658	0/0:20,0:20:54.16:0,54,705	0/0:22,0:22:50.03:0,50,620	0/0:15,0:15:35.79:0,36,450	1/1:22,0:22:16.76:113,17,0	0/0:19,0:19:40.55:0,41,400	0/0:23,0:22:62.25:0,62,764	0/0:20,0:20:32.34:0,32,366	0/0:29,0:29:42.66:0,43,651	0/0:14,0:14:33.11:0,33,457	0/0:16,0:16:41.33:0,41,514	0/0:22,0:22:44.80:0,45,564	0/1:3,8:13:13.67:38,0,14	0/0:27,0:27:32.74:0,33,745	0/0:17,0:17:32.17:0,32,421	0/0:21,0:21:44.27:0,44,576
chr10	44014761	.	G	GTGTC	922.18	PASS	AB=1.000;AC=10;AF=0.179;AN=56;BaseQRankSum=8.154;DP=567;FS=4.613;HRun=0;HaplotypeScore=114.0022;InbreedingCoeff=0.2403;MQ=71.36;MQ0=12;MQRankSum=-1.668;QD=5.59;ReadPosRankSum=2.333;VQSLOD=2.2704;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:42,0:42:0.96:1,0,510	1/1:2,7:13:2.76:189,3,0	0/0:38,0:24:64.77:0,65,635	0/0:28,0:18:44.79:0,45,390	0/0:18,0:17:19.89:0,20,161	0/1:26,0:26:99:142,0,164	0/0:24,0:23:38.72:0,39,319	0/0:22,0:20:31.04:0,31,336	0/1:13,0:13:22.45:22,0,81	0/1:14,0:14:4.40:4,0,178	0/1:12,0:12:3.07:3,0,146	0/0:17,0:17:41.25:0,41,469	0/0:20,0:20:25.04:0,25,505	0/0:14,0:14:17.94:0,18,364	0/0:20,0:21:17.70:0,18,291	0/0:12,0:13:6.15:0,6,175	1/1:22,0:22:35.95:418,36,0	0/1:23,0:23:61.67:277,0,62	0/0:15,0:15:32.12:0,32,390	0/0:16,0:16:10.24:0,10,109	0/0:39,0:38:42:0,42,412	0/0:15,0:15:35.92:0,36,393	0/0:19,0:19:51.10:0,51,506	0/0:19,0:19:45.09:0,45,655	0/0:17,0:17:18.37:0,18,187	0/0:23,0:23:27.51:0,28,289	0/0:12,0:12:14.71:0,15,121	0/0:12,0:12:9.13:0,9,198
chr10	44014876	.	GT	G	2992.48	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=10.126;DP=639;FS=1.878;HRun=4;HaplotypeScore=68.6437;InbreedingCoeff=0.9988;MQ=86.60;MQ0=0;MQRankSum=-2.224;QD=31.83;ReadPosRankSum=-2.054;VQSLOD=3.3793;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,111,1537	0/0:10,0:10:27.02:0,27,350	0/0:27,0:27:75.20:0,75,969	0/0:32,0:32:42.78:0,43,898	0/0:16,0:16:48.16:0,48,672	0/0:25,0:25:75.23:0,75,1017	0/0:20,0:20:60.17:0,60,804	1/1:1,29:30:87.24:1020,87,0	0/0:21,0:21:60.18:0,60,815	1/1:0,27:27:81.22:945,81,0	1/1:1,9:10:27.08:324,27,0	0/0:14,0:14:36.12:0,36,504	0/0:20,0:20:60.19:0,60,820	0/0:30,0:30:87.28:0,87,1202	0/0:23,0:23:69.23:0,69,966	0/0:19,0:19:54.18:0,54,755	0/0:23,0:23:57.14:0,57,769	0/0:24,0:24:66.18:0,66,901	0/0:22,0:22:51.17:0,51,714	0/0:24,0:24:66.19:0,66,902	0/0:30,0:30:90.28:0,90,1241	0/0:21,0:21:63.21:0,63,882	0/0:20,0:20:60.20:0,60,820	0/0:30,0:30:84.25:0,84,1138	1/1:2,25:27:72.22:864,72,0	0/0:24,0:24:66.20:0,66,891	0/0:19,0:18:57.18:0,57,780	0/0:9,0:9:24.08:0,24,336
chr10	44014927	.	GCACCTAGACAGACGTT	G	1874.96	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.615;DP=640;FS=5.088;HRun=0;HaplotypeScore=269.5163;InbreedingCoeff=0.9948;MQ=90.48;MQ0=1;MQRankSum=-5.951;QD=72.11;ReadPosRankSum=1.528;VQSLOD=3.0134;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,138,10512	1/1:0,6:6:18.06:834,18,0	0/0:20,0:19:51.17:0,51,2820	0/0:34,0:34:79.90:0,80,5286	0/0:24,0:24:66.23:0,66,4882	0/0:20,0:20:54.19:0,54,4226	0/0:22,0:22:57.18:0,57,3918	0/0:34,0:34:99:0,99,6091	0/0:19,0:19:57.18:0,57,3890	0/0:24,0:24:63.22:0,63,4458	0/0:9,0:9:27.09:0,27,1904	0/0:19,0:19:57.20:0,57,4462	0/0:21,0:21:60.21:0,60,4542	0/0:30,0:30:87.30:0,87,6408	0/0:18,0:18:54.19:0,54,4012	0/0:16,0:16:48.15:0,48,3376	1/1:7,13:20:27.09:1161,27,0	0/0:16,0:16:45.15:0,45,3526	0/0:22,0:22:54.18:0,54,3300	0/0:22,0:22:63.20:0,63,4149	0/0:38,0:38:99:0,108,7521	0/0:23,0:23:60.21:0,60,4282	0/0:18,0:18:48.15:0,48,3383	0/0:32,0:32:87.30:0,87,6544	0/0:28,0:28:81.28:0,81,5946	0/0:19,0:19:54.19:0,54,3749	0/0:17,0:16:51.13:0,51,3280	0/0:18,0:18:54.19:0,54,4116
chr10	44015463	.	AT	A	1882.03	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.982;DP=627;FS=0.000;HRun=6;HaplotypeScore=57.1341;InbreedingCoeff=0.9842;MQ=71.67;MQ0=0;MQRankSum=-4.826;QD=25.43;ReadPosRankSum=1.098;VQSLOD=3.3694;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:72.20:0,72,914	0/0:17,0:17:48.13:0,48,614	0/0:13,0:13:27.08:0,27,327	0/0:5,0:5:15.01:0,15,179	0/0:33,0:33:93.29:0,93,1209	0/0:20,0:20:60.20:0,60,790	0/0:17,0:17:51.17:0,51,670	0/0:30,0:30:81.26:0,81,1062	0/0:23,0:23:63.20:0,63,829	0/0:32,0:32:93.29:0,93,1211	0/0:27,0:27:72.23:0,72,947	0/0:19,0:19:48.16:0,48,632	0/0:22,0:22:63.20:0,63,814	0/0:25,0:25:69.21:0,69,893	1/1:1,29:30:75.19:806,75,0	1/1:3,17:20:14.66:507,15,0	0/0:19,0:19:54.18:0,54,709	1/1:1,23:24:66.17:709,66,0	0/0:24,0:24:60.16:0,60,747	0/0:29,0:29:78.25:0,78,1026	0/0:10,0:10:24.08:0,24,316	0/0:20,0:20:60.17:0,60,760	0/0:23,0:23:63.19:0,63,812	0/0:21,0:21:63.20:0,63,829	0/0:30,0:30:84.27:0,84,1105	0/0:22,0:22:63.18:0,63,800	0/0:37,0:37:96.31:0,96,1262	0/0:10,0:9:18.06:0,18,233
chr10	44016067	.	T	TCATACATACATACATACATA	17397.73	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-2.654;DP=816;FS=0.395;HRun=0;HaplotypeScore=367.0041;InbreedingCoeff=0.9166;MQ=62.35;MQ0=1;MQRankSum=-10.535;QD=38.07;ReadPosRankSum=-3.686;VQSLOD=1.6923;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:42,0:42:47.84:801,48,0	1/1:5,7:20:5.56:541,6,0	0/0:32,0:25:18.06:0,18,352	0/0:43,0:37:16.72:0,17,825	1/1:8,9:35:9.03:498,9,0	0/0:22,0:22:54.17:0,54,2311	0/0:28,0:28:54.12:0,54,1514	1/1:46,0:44:72.16:1668,72,0	0/0:21,0:21:39.07:0,39,1255	1/1:44,0:44:92.87:3697,93,0	1/1:30,0:30:30.10:1445,30,0	0/0:5,0:20:33.11:0,33,645	0/0:7,0:17:20.43:0,20,364	0/0:9,0:27:23.89:0,24,436	0/0:31,0:31:69.14:0,69,2405	0/0:27,0:27:63.16:0,63,2380	1/1:9,11:33:6.02:558,6,0	0/0:18,0:18:42.02:0,42,1304	1/1:17,8:40:71.96:2675,72,0	1/1:10,12:34:3.01:279,3,0	1/1:25,0:25:23.82:1006,24,0	0/0:5,0:31:48.28:0,48,875	0/0:13,0:23:27.07:0,27,598	0/0:10,0:19:18.06:0,18,352	1/1:25,0:25:32.94:1577,33,0	1/1:9,0:31:33.03:1800,33,0	1/1:9,8:37:6.02:559,6,0	1/1:13,0:13:15:293,15,0
chr10	44017319	.	ATG	A	487.10	PASS	AB=0.920;AC=18;AF=0.360;AN=50;BaseQRankSum=2.540;DP=497;FS=16.092;HRun=0;HaplotypeScore=81.5258;InbreedingCoeff=0.2920;MQ=72.77;MQ0=14;MQRankSum=0.953;QD=2.44;ReadPosRankSum=1.125;VQSLOD=0.7326;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:34,0:34:12.96:13,0,412	0/0:4,0:9:14.97:0,15,123	./.	./.	0/1:13,0:13:16.95:17,0,159	0/0:19,0:20:3.59:0,4,296	0/0:20,0:20:15.05:0,15,207	./.	0/1:14,0:14:14.45:14,0,161	0/1:14,1:16:32.69:61,0,33	1/1:7,6:12:3.01:33,3,0	0/1:12,0:12:58.83:59,0,305	0/0:10,0:9:6.02:0,6,89	0/0:6,0:6:9.03:0,9,131	1/1:7,6:12:6.02:65,6,0	1/1:17,0:17:12:113,12,0	1/1:18,0:25:17.13:103,17,0	1/1:11,0:13:8.52:42,9,0	0/0:21,0:24:16.22:0,16,143	0/0:11,0:14:8.86:0,9,108	0/0:41,0:53:20.96:0,21,191	0/0:3,0:3:3.01:0,3,45	0/0:14,0:14:9.02:0,9,115	0/0:15,0:15:24.02:0,24,307	1/1:7,6:13:5.85:47,6,0	0/0:23,0:23:32.76:0,33,407	0/1:7,10:17:30.93:86,0,31	0/0:7,0:10:9.01:0,9,94
chr10	44017470	.	A	AGGCT	3480.36	PASS	AB=0.923;AC=13;AF=0.232;AN=56;BaseQRankSum=5.380;DP=440;FS=12.248;HRun=0;HaplotypeScore=82.8089;InbreedingCoeff=0.8529;MQ=61.38;MQ0=0;MQRankSum=-4.194;QD=36.64;ReadPosRankSum=-1.536;VQSLOD=2.3660;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,99,1889	1/1:1,1:2:5.99:99,6,0	0/0:17,0:16:24.73:0,25,501	0/0:12,0:11:29.58:0,30,503	0/0:16,0:16:48.16:0,48,944	0/0:19,0:19:54.17:0,54,1043	0/0:15,0:15:45.14:0,45,863	1/1:6,16:25:51.44:977,51,0	0/0:15,0:15:39.13:0,39,779	1/1:2,12:15:27.86:530,28,0	1/1:7,3:12:5.49:128,5,0	0/0:14,0:14:39.08:0,39,671	0/0:14,0:14:42.14:0,42,836	0/0:15,0:15:45.12:0,45,826	0/0:19,0:18:54.17:0,54,1044	0/0:16,0:16:48.15:0,48,923	1/1:1,12:13:35.59:929,36,0	0/0:15,0:15:45.13:0,45,839	0/0:12,0:12:36.08:0,36,578	0/0:10,0:10:27.04:0,27,464	0/0:25,0:25:75.26:0,75,1486	0/0:9,0:9:24.08:0,24,479	0/0:15,0:15:42.13:0,42,803	0/0:15,0:15:45.14:0,45,862	1/1:3,12:15:30.10:776,30,0	0/1:11,1:12:41.65:42,0,623	0/0:21,0:21:60.17:0,60,1136	0/0:16,0:16:48.16:0,48,957
chr10	44017660	.	TAC	T	297.18	PASS	AB=0.730;AC=10;AF=0.179;AN=56;BaseQRankSum=8.306;DP=502;FS=19.063;HRun=0;HaplotypeScore=100.1267;InbreedingCoeff=0.7026;MQ=71.17;MQ0=4;MQRankSum=-3.266;QD=4.50;ReadPosRankSum=-1.797;VQSLOD=1.1587;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:13.78:0,14,209	1/1:4,0:4:9.81:65,10,0	0/0:29,0:20:41.20:0,41,513	0/0:29,0:20:22.23:0,22,290	0/0:19,0:18:26.85:0,27,239	0/0:18,0:18:37.63:0,38,532	0/0:25,0:25:36.88:0,37,583	1/1:12,0:11:9.03:60,9,0	0/0:22,0:22:63.02:0,63,815	1/1:10,0:13:19.85:147,20,0	1/1:5,0:5:2.99:24,3,0	0/0:23,0:23:41.67:0,42,349	0/0:21,0:18:35.82:0,36,346	0/0:21,0:20:35.92:0,36,303	0/0:22,0:23:44.73:0,45,415	0/0:20,0:20:27:0,27,258	0/1:3,10:13:9.34:30,0,9	0/0:17,0:18:18:0,18,158	0/0:14,0:14:35.97:0,36,321	0/0:13,0:12:23.80:0,24,226	0/0:17,0:17:14.54:0,15,117	0/0:11,0:11:20.07:0,20,142	0/0:18,0:18:50.87:0,51,509	0/0:15,0:14:8.77:0,9,69	0/1:15,0:17:5.20:123,0,5	0/0:19,0:17:32.98:0,33,330	0/0:19,0:19:43.82:0,44,457	0/0:11,0:11:33.08:0,33,454
chr10	44017669	.	A	ACACT	2863.19	PASS	AB=0.976;AC=22;AF=0.393;AN=56;BaseQRankSum=4.717;DP=608;FS=32.049;HRun=0;HaplotypeScore=168.6852;InbreedingCoeff=-0.1019;MQ=58.08;MQ0=7;MQRankSum=-5.746;QD=7.36;ReadPosRankSum=0.490;VQSLOD=0.8674;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:32:10.68:11,0,134	0/0:3,0:3:8.90:0,9,61	0/0:29,0:17:37.79:0,38,382	0/0:37,0:17:25.27:0,25,328	0/1:21,0:23:7.51:8,0,168	0/0:18,0:20:60:0,60,743	0/0:18,0:23:50.10:0,50,665	0/1:17,0:14:94.42:94,0,117	0/0:24,0:24:69.04:0,69,962	0/1:20,0:19:87.69:88,0,172	0/1:17,0:16:11.40:43,0,11	0/0:26,0:26:5.65:0,6,252	0/1:27,0:24:99:114,0,210	0/0:25,0:24:35.86:0,36,289	1/1:4,18:23:18.05:993,18,0	1/1:2,18:21:0.19:561,0,0	1/1:18,0:18:11.77:110,12,0	1/1:0,17:17:18.06:486,18,0	0/1:22,0:22:45.74:46,0,224	0/1:19,0:17:93.22:93,0,93	0/1:19,0:19:26.98:27,0,99	0/0:12,0:11:20.88:0,21,166	0/1:25,0:25:6.89:7,0,242	0/1:18,0:18:8.03:8,0,62	0/0:20,0:19:3.66:0,4,168	0/1:24,0:21:56.94:57,0,180	0/1:24,0:24:99:102,0,186	0/1:18,0:18:63.70:188,0,64
chr10	44018748	.	TTG	T	15494.21	PASS	AB=0.917;AC=31;AF=0.554;AN=56;BaseQRankSum=14.590;DP=710;FS=0.881;HRun=0;HaplotypeScore=88.8434;InbreedingCoeff=0.9275;MQ=89.62;MQ0=1;MQRankSum=-4.074;QD=39.03;ReadPosRankSum=5.342;VQSLOD=7.0305;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,126,2413	1/1:0,11:11:33.11:505,33,0	0/0:25,0:25:75.03:0,75,1275	0/0:30,0:30:87.29:0,87,1592	0/0:19,0:19:54.18:0,54,1022	0/0:10,0:10:30.10:0,30,564	0/0:46,0:46:99:0,135,2521	1/1:0,26:26:78.26:1195,78,0	0/0:29,0:29:87.21:0,87,1635	1/1:1,28:29:86.64:1254,87,0	1/1:2,19:21:60.20:900,60,0	1/1:0,30:30:81.16:1240,81,0	1/1:2,24:26:66.09:1005,66,0	1/1:2,36:38:93.32:1424,93,0	1/1:0,23:22:63.21:965,63,0	1/1:0,21:21:51.17:781,51,0	1/1:0,43:43:99:1884,123,0	1/1:0,29:29:69.23:1053,69,0	0/0:17,0:17:48.16:0,48,918	0/0:17,0:17:51.17:0,51,925	0/0:51,0:51:99:0,151,2850	1/1:0,18:18:54.18:823,54,0	1/1:0,11:11:27.09:413,27,0	1/1:1,26:27:69.23:1057,69,0	1/1:0,22:22:63.21:965,63,0	0/1:20,2:22:31.69:32,0,978	0/0:17,0:17:51.17:0,51,970	0/0:10,0:10:30.10:0,30,579
chr10	44019885	.	GCGTT	G	13133.88	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=16.089;DP=411;FS=7.083;HRun=0;HaplotypeScore=243.4342;InbreedingCoeff=0.9542;MQ=85.83;MQ0=0;MQRankSum=-15.886;QD=47.24;ReadPosRankSum=5.763;VQSLOD=4.2759;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,20:20:55.57:811,56,0	1/1:0,8:8:24.08:415,24,0	0/0:20,0:20:20.37:0,20,1366	0/0:35,0:35:96.33:0,96,2623	1/1:0,11:11:26.95:325,27,0	0/0:18,0:18:54.19:0,54,1563	0/0:27,0:27:81.26:0,81,2251	1/1:0,12:12:36.11:582,36,0	0/0:33,0:33:99:0,99,2821	1/1:0,12:12:36.12:647,36,0	1/1:0,7:7:18.06:254,18,0	1/1:0,19:20:60.20:1062,60,0	1/1:0,19:19:51.17:896,51,0	1/1:0,19:19:54.18:936,54,0	1/1:0,21:21:63.22:1136,63,0	1/1:0,17:17:51.17:922,51,0	1/1:0,14:14:20.15:600,20,0	1/1:0,5:5:15.05:281,15,0	1/1:0,5:5:15.05:282,15,0	1/1:0,11:11:33.11:568,33,0	1/1:0,10:10:26.93:371,27,0	1/1:0,3:3:9.03:141,9,0	1/1:0,12:12:33.11:509,33,0	1/1:0,8:8:11.95:187,12,0	1/1:0,13:13:38.96:606,39,0	1/1:0,12:12:36.12:658,36,0	1/1:1,15:16:45.11:782,45,0	1/1:0,3:3:9.03:163,9,0
chr10	44019891	.	TCTATC	T	14967.38	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=16.332;DP=418;FS=8.662;HRun=0;HaplotypeScore=246.5359;InbreedingCoeff=0.9541;MQ=86.27;MQ0=1;MQRankSum=-16.195;QD=53.26;ReadPosRankSum=7.026;VQSLOD=3.8578;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:0,20:20:50.67:904,51,0	1/1:0,8:8:24.08:472,24,0	0/0:22,0:22:66.19:0,66,1890	0/0:33,0:34:96.19:0,96,2893	1/1:0,11:11:27.09:403,27,0	0/0:18,0:18:54.19:0,54,1733	0/0:29,0:29:87.28:0,87,2736	1/1:0,12:12:36.12:668,36,0	0/0:34,0:34:99:0,102,3376	1/1:0,12:12:36.12:733,36,0	1/1:0,7:7:18.06:297,18,0	1/1:3,20:22:63.22:1263,63,0	1/1:0,19:19:51.17:1023,51,0	1/1:0,19:19:54.18:1066,54,0	1/1:0,21:21:63.22:1286,63,0	1/1:0,17:17:51.17:1043,51,0	1/1:0,14:14:17.07:644,17,0	1/1:0,5:5:15.05:317,15,0	1/1:0,5:5:15.05:318,15,0	1/1:0,11:11:33.11:646,33,0	1/1:0,10:10:24.08:418,24,0	1/1:0,3:3:9.03:162,9,0	1/1:0,12:12:33.11:589,33,0	1/1:0,8:8:12.02:215,12,0	1/1:0,13:13:36.12:677,36,0	1/1:0,12:12:36.12:745,36,0	1/1:1,15:16:45.15:894,45,0	1/1:0,3:3:9.03:185,9,0
chr10	44020748	.	C	CA	18913.81	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-0.761;DP=596;FS=37.107;HRun=2;HaplotypeScore=143.5303;InbreedingCoeff=0.9996;MQ=73.75;MQ0=0;MQRankSum=-8.928;QD=36.80;ReadPosRankSum=3.317;VQSLOD=1.8417;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,33:33:84.20:1161,84,0	1/1:1,13:14:39.13:559,39,0	0/0:16,0:16:45.12:0,45,537	0/0:17,0:16:38.56:0,39,445	1/1:3,19:22:45.15:648,45,0	0/0:13,0:13:39.12:0,39,483	0/0:18,0:18:42.12:0,42,508	1/1:1,28:29:84.28:1205,84,0	0/0:18,0:18:51.16:0,51,630	1/1:3,21:24:63.21:906,63,0	1/1:3,14:17:45.11:619,45,0	1/1:0,22:22:57.19:820,57,0	1/1:1,17:18:51.17:722,51,0	1/1:2,20:22:66.22:947,66,0	1/1:2,28:30:87.25:1220,87,0	1/1:1,22:22:63.13:868,63,0	1/1:0,29:29:75.25:1090,75,0	1/1:2,9:12:27.09:379,27,0	1/1:1,14:15:42.12:585,42,0	1/1:1,23:24:56.28:787,56,0	1/1:2,34:36:81.23:1136,81,0	1/1:1,19:20:54.18:772,54,0	1/1:2,20:22:51.60:711,52,0	1/1:3,16:19:39.08:548,39,0	1/1:0,21:21:57.19:821,57,0	1/1:2,23:25:66.22:947,66,0	1/1:1,23:24:66.22:949,66,0	1/1:0,13:13:36.12:517,36,0
chr10	44020791	.	T	TC	9956.96	PASS	AB=0.756;AC=43;AF=0.768;AN=56;BaseQRankSum=10.417;DP=507;FS=25.487;HRun=2;HaplotypeScore=259.5428;InbreedingCoeff=0.6547;MQ=42.68;MQ0=3;MQRankSum=-3.178;QD=22.53;ReadPosRankSum=5.937;VQSLOD=1.0401;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:21,6:27:2.88:378,0,3	1/1:4,4:8:19.75:168,20,0	0/0:15,0:13:33.06:0,33,379	0/0:5,0:4:9.01:0,9,98	1/1:18,3:20:8.82:385,9,0	0/0:9,0:9:27.08:0,27,333	0/0:19,0:18:48.15:0,48,590	0/1:21,20:39:99:510,0,449	0/0:17,0:17:48.13:0,48,568	1/1:4,17:20:51.04:576,51,0	1/1:4,9:13:34.49:346,34,0	1/1:6,12:18:48.09:530,48,0	1/1:6,13:18:51.10:549,51,0	1/1:7,17:24:52.93:615,53,0	1/1:6,18:23:60.13:646,60,0	1/1:6,20:26:75.01:816,75,0	1/1:5,11:15:2.16:339,2,0	1/1:4,6:10:27.84:278,28,0	0/1:15,6:20:99:315,0,138	1/1:11,7:17:38.18:382,38,0	1/1:13,4:16:20.90:303,21,0	1/1:4,10:14:35.59:355,36,0	1/1:3,14:17:32.89:347,33,0	1/1:11,10:21:5.97:410,6,0	1/1:7,10:17:41.22:422,41,0	1/1:12,11:23:51.68:641,52,0	1/1:9,7:17:40.25:405,40,0	1/1:4,4:9:24.01:242,24,0
chr10	44020792	.	CCTT	C	8840.96	PASS	AB=0.888;AC=40;AF=0.714;AN=56;BaseQRankSum=9.767;DP=502;FS=10.094;HRun=0;HaplotypeScore=274.4510;InbreedingCoeff=0.4455;MQ=41.14;MQ0=3;MQRankSum=-4.040;QD=20.18;ReadPosRankSum=6.306;VQSLOD=3.0955;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:20,6:26:52.57:306,0,53	1/1:6,2:8:18.42:162,18,0	0/0:14,0:12:33.06:0,33,424	0/0:5,0:4:9.01:0,9,116	1/1:5,16:20:8.13:433,8,0	0/0:9,0:9:27.09:0,27,444	0/0:19,0:18:48.16:0,48,815	0/1:41,0:39:99:400,0,696	0/0:17,0:17:48.14:0,48,714	1/1:21,0:20:47.18:454,47,0	1/1:11,2:13:35.55:333,36,0	1/1:15,3:18:48.58:457,49,0	1/1:14,4:17:49.91:500,50,0	1/1:17,7:24:43.14:398,43,0	1/1:20,3:22:57.38:487,57,0	1/1:23,3:26:72.83:642,73,0	0/1:16,0:15:27.37:251,0,27	1/1:9,1:10:9.35:186,9,0	0/1:15,5:19:98.73:348,0,99	1/1:11,9:19:42.65:460,43,0	0/1:12,4:15:40.57:225,0,41	1/1:12,1:13:35.27:321,35,0	1/1:14,3:17:27.76:277,28,0	0/1:19,2:21:41.82:259,0,42	1/1:14,3:17:44.49:422,44,0	1/1:13,10:23:31.33:740,31,0	1/1:10,7:17:41.61:519,42,0	1/1:5,4:9:23.79:261,24,0
chr10	44020793	.	CTT	C	7093.87	PASS	AB=0.985;AC=37;AF=0.661;AN=56;BaseQRankSum=6.951;DP=514;FS=15.686;HRun=2;HaplotypeScore=293.8926;InbreedingCoeff=0.3085;MQ=38.92;MQ0=3;MQRankSum=-5.872;QD=15.69;ReadPosRankSum=8.262;VQSLOD=0.0031;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:24,1:25:60.24:181,0,60	1/1:9,0:9:16.65:174,17,0	0/0:14,0:12:33.11:0,33,512	0/0:4,0:3:9.03:0,9,146	0/1:22,0:21:22.27:316,0,22	0/0:9,0:9:27.09:0,27,474	0/0:18,0:17:48.16:0,48,854	0/1:39,0:37:99:354,0,843	0/0:17,0:17:48.16:0,48,799	1/1:19,0:18:46.78:398,47,0	1/1:13,0:13:33.22:270,33,0	1/1:19,1:20:35.23:393,35,0	1/1:19,0:18:42.56:456,43,0	1/1:24,0:24:21.47:415,21,0	1/1:24,1:24:57.36:491,57,0	1/1:25,1:26:73.05:577,73,0	0/1:18,0:17:31.04:162,0,31	0/1:12,0:12:1.04:151,0,1	0/1:20,0:19:99:202,0,186	1/1:20,0:19:31.60:347,32,0	0/1:16,1:16:9.34:102,0,9	1/1:13,1:14:24.72:298,25,0	0/1:22,0:22:13.31:272,0,13	0/1:21,1:22:13.15:291,0,13	1/1:17,1:18:30.41:352,30,0	1/1:23,0:23:21.48:399,21,0	1/1:16,0:16:33.50:298,34,0	1/1:9,0:9:23.70:197,24,0
chr10	44020795	.	T	TC	8259.35	PASS	AB=0.764;AC=40;AF=0.714;AN=56;BaseQRankSum=9.113;DP=511;FS=9.775;HRun=2;HaplotypeScore=290.0744;InbreedingCoeff=0.4593;MQ=38.63;MQ0=3;MQRankSum=-3.432;QD=18.27;ReadPosRankSum=4.317;VQSLOD=3.2570;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:21,3:24:41.52:293,0,42	1/1:4,4:9:16.39:161,16,0	0/0:13,0:11:21:0,21,211	0/0:4,0:3:6.02:0,6,74	1/1:20,2:21:8.38:362,8,0	0/0:9,0:9:24.06:0,24,283	0/0:18,0:17:48.14:0,48,578	0/1:25,14:37:99:455,0,486	0/0:15,0:15:42.12:0,42,494	1/1:3,17:19:51.09:536,51,0	1/1:6,7:13:32.73:296,33,0	1/1:9,11:20:40.96:411,41,0	1/1:7,12:18:50.59:492,51,0	1/1:9,16:25:43.89:589,44,0	1/1:10,16:25:56.08:577,56,0	1/1:7,19:26:57.62:616,58,0	0/1:9,9:17:11.78:177,0,12	1/1:3,9:12:30.38:279,30,0	0/1:14,6:18:99:247,0,192	1/1:15,5:19:35.92:325,36,0	0/1:14,2:15:8.68:160,0,9	1/1:5,9:14:29.71:295,30,0	1/1:9,13:22:26.87:317,27,0	0/1:9,12:21:9.45:334,0,9	1/1:8,10:18:38.75:364,39,0	1/1:14,8:22:35.06:475,35,0	1/1:12,5:17:33.28:304,33,0	1/1:5,4:9:16.69:196,17,0
chr10	44020799	.	T	TC	3781.48	PASS	AB=0.907;AC=39;AF=0.696;AN=56;BaseQRankSum=12.016;DP=476;FS=4.440;HRun=2;HaplotypeScore=305.5275;InbreedingCoeff=0.3881;MQ=31.29;MQ0=3;MQRankSum=-2.144;QD=8.81;ReadPosRankSum=0.876;VQSLOD=1.3360;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:14,5:19:68.93:196,0,69	1/1:9,0:9:11.46:70,11,0	0/0:7,0:6:9.03:0,9,107	0/0:2,0:2:6.02:0,6,74	1/1:22,1:21:11.36:195,11,0	0/0:7,0:7:18.06:0,18,221	0/0:18,0:17:45.07:0,45,523	0/1:37,1:36:99:163,0,457	0/0:13,0:13:33.10:0,33,403	1/1:16,3:18:41:220,41,0	1/1:10,1:11:22.73:108,23,0	1/1:17,0:17:35.93:169,36,0	1/1:19,0:18:35.77:168,36,0	1/1:26,0:26:51.80:270,52,0	1/1:25,0:24:35.71:166,36,0	1/1:24,0:24:41.70:223,42,0	0/1:16,1:16:39.14:83,0,39	1/1:12,0:12:17.32:118,17,0	0/1:19,1:18:65.73:66,0,224	1/1:16,3:18:31.59:203,32,0	0/1:9,5:13:35.04:135,0,35	1/1:14,0:14:29.76:200,30,0	1/1:21,0:21:46.49:257,46,0	0/1:19,1:20:31.77:148,0,32	1/1:14,1:15:32.83:214,33,0	0/1:21,0:21:1.74:126,0,2	1/1:16,1:17:25.95:210,26,0	1/1:9,0:9:16.46:74,16,0
chr10	44020801	.	CTTCCTTA	C	12240.28	PASS	AB=0.883;AC=40;AF=0.714;AN=56;BaseQRankSum=8.495;DP=473;FS=20.982;HRun=0;HaplotypeScore=323.8604;InbreedingCoeff=0.3966;MQ=30.85;MQ0=3;MQRankSum=-3.585;QD=28.47;ReadPosRankSum=-3.027;VQSLOD=3.0741;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:14,6:20:53.85:628,0,54	1/1:7,2:9:16.25:264,16,0	0/0:6,0:5:9.03:0,9,107	0/0:2,0:2:5.97:0,6,56	1/1:8,16:22:24.76:949,25,0	0/0:6,0:6:17.65:0,18,300	0/0:17,0:16:44.38:0,44,638	0/1:35,0:34:99:375,0,716	0/0:12,0:12:31.74:0,32,435	1/1:19,0:18:50.98:571,51,0	1/1:9,2:11:29.15:285,29,0	1/1:14,3:17:40.82:523,41,0	1/1:15,4:18:48.63:692,49,0	1/1:19,7:26:44.46:688,44,0	1/1:22,3:24:55.38:654,55,0	1/1:21,3:24:38.17:537,38,0	0/1:18,0:17:85.10:296,0,85	1/1:9,1:12:0.26:208,0,0	0/1:15,5:18:89.61:513,0,90	1/1:10,9:18:42.14:735,42,0	0/1:10,4:13:34.08:316,0,34	1/1:13,1:14:24.79:368,25,0	1/1:18,3:21:44.76:522,45,0	0/1:17,1:20:64.15:214,0,64	1/1:12,3:15:38.75:495,39,0	1/1:11,10:21:8.45:1125,8,0	1/1:11,7:18:51.04:905,51,0	1/1:4,5:9:23.98:377,24,0
chr10	44020805	.	CTTA	C	6362.22	PASS	AB=0.859;AC=32;AF=0.571;AN=56;BaseQRankSum=5.899;DP=444;FS=0.443;HRun=0;HaplotypeScore=298.3318;InbreedingCoeff=-0.0394;MQ=30.44;MQ0=3;MQRankSum=-1.936;QD=15.67;ReadPosRankSum=-4.549;VQSLOD=3.0921;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:14,6:20:21:419,0,21	0/1:8,1:9:10.16:130,0,10	0/0:3,0:3:3.01:0,3,35	0/0:2,0:2:5.86:0,6,35	1/1:19,4:21:37.58:595,38,0	0/0:6,0:6:17.64:0,18,187	0/0:15,0:14:37.94:0,38,378	0/1:29,5:33:99:269,0,412	0/0:12,0:12:31.65:0,32,289	0/1:10,3:12:3.51:175,0,4	0/1:7,2:9:8.52:65,0,9	1/1:13,3:16:13.75:239,14,0	1/1:16,2:17:6.50:269,6,0	1/1:22,2:24:6.45:370,6,0	0/1:20,4:23:13.89:283,0,14	0/1:22,2:24:5.73:249,0,6	0/1:13,5:17:97.41:214,0,97	0/1:10,2:12:14.25:113,0,14	0/1:16,2:16:94.65:230,0,95	1/1:15,4:18:33.35:404,33,0	0/1:9,5:13:25.04:221,0,25	1/1:10,3:13:7.18:181,7,0	1/1:16,5:21:14.29:308,14,0	0/1:19,1:20:49.16:102,0,49	0/1:13,1:14:4.14:185,0,4	0/1:18,2:20:13.33:604,0,13	1/1:12,5:17:31.78:560,32,0	1/1:6,0:6:12.04:175,12,0
chr10	44020811	.	T	TC	5354.43	PASS	AB=0.871;AC=26;AF=0.481;AN=54;BaseQRankSum=8.422;DP=447;FS=3.747;HRun=2;HaplotypeScore=320.7195;InbreedingCoeff=0.2402;MQ=29.54;MQ0=6;MQRankSum=-1.652;QD=16.03;ReadPosRankSum=1.256;VQSLOD=3.8845;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:19,1:20:99:102,0,205	1/1:7,3:10:14.64:180,15,0	./.	0/0:1,0:1:2.98:0,3,22	0/1:25,0:23:95.37:95,0,295	0/0:5,0:5:15.05:0,15,185	0/0:14,0:13:36.11:0,36,443	0/1:29,3:30:99:102,0,568	0/0:9,0:9:21.07:0,21,258	0/1:9,0:8:35.19:62,0,35	0/1:10,1:11:14.74:25,0,15	1/1:9,9:18:47.08:483,47,0	1/1:11,8:18:34.98:421,35,0	1/1:8,15:23:69.13:805,69,0	1/1:10,15:24:61.49:684,61,0	1/1:7,19:26:74.53:835,75,0	0/1:7,10:16:83.41:229,0,83	0/1:6,6:12:75.79:138,0,76	0/0:19,0:16:31.59:0,32,423	0/0:22,0:20:17.95:0,18,226	0/1:15,1:15:49.01:49,0,103	1/1:8,8:16:30.36:327,30,0	1/1:9,14:23:39.76:409,40,0	0/1:12,10:22:7.89:395,0,8	0/1:10,0:10:12.64:13,0,29	0/0:18,0:18:39.52:0,40,389	0/0:20,0:20:39.26:0,39,306	0/0:5,0:5:12.03:0,12,129
chr10	44020815	.	T	TC	3527.31	PASS	AB=0.880;AC=22;AF=0.423;AN=52;BaseQRankSum=8.227;DP=441;FS=2.546;HRun=2;HaplotypeScore=328.1911;InbreedingCoeff=0.3323;MQ=29.39;MQ0=7;MQRankSum=0.248;QD=13.62;ReadPosRankSum=2.989;VQSLOD=2.9486;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:18.78:0,19,248	1/1:4,4:8:20.93:214,21,0	./.	./.	0/0:28,0:26:21.15:0,21,335	0/0:5,0:5:15.05:0,15,185	0/0:15,0:13:33.09:0,33,396	0/1:25,4:28:99:114,0,542	0/0:8,0:8:21.07:0,21,258	0/1:7,3:9:76.32:76,0,112	0/1:8,2:10:44.58:82,0,45	1/1:19,0:19:33:294,33,0	1/1:17,0:16:23.61:237,24,0	1/1:23,1:24:64.95:476,65,0	1/1:19,3:22:61.42:517,61,0	1/1:22,3:25:71.95:599,72,0	0/1:10,5:14:56.93:239,0,57	0/1:9,1:10:64.14:70,0,64	0/0:18,0:15:36.97:0,37,294	0/0:24,0:22:42.43:0,42,380	0/0:16,0:14:0.47:0,0,142	0/1:16,0:16:12.20:124,0,12	1/1:23,0:23:25.40:208,25,0	0/1:22,0:22:18.20:218,0,18	0/1:8,1:9:61.08:61,0,132	0/0:20,0:19:50.44:0,50,488	0/0:21,0:21:51.36:0,51,550	0/0:5,0:5:12.01:0,12,126
chr10	44020817	.	C	CCT	6592.89	PASS	AB=0.902;AC=22;AF=0.423;AN=52;BaseQRankSum=7.001;DP=434;FS=0.000;HRun=0;HaplotypeScore=339.7859;InbreedingCoeff=0.1954;MQ=29.25;MQ0=9;MQRankSum=-0.636;QD=24.51;ReadPosRankSum=5.182;VQSLOD=4.0717;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:30.86:0,31,396	1/1:9,0:9:20.10:221,20,0	./.	./.	0/0:27,0:25:2.08:0,2,467	0/0:5,0:5:15.05:0,15,243	0/0:14,0:12:33.10:0,33,512	0/1:27,0:26:99:142,0,790	0/0:8,0:8:21.07:0,21,340	0/1:11,0:9:99:144,0,101	0/1:9,0:9:76.25:169,0,76	1/1:11,6:18:7.16:587,7,0	0/1:13,5:16:5.49:513,0,5	1/1:13,9:22:38.46:908,38,0	1/1:11,10:21:55.81:943,56,0	1/1:9,13:22:61.82:987,62,0	0/1:17,0:16:93.94:356,0,94	0/1:6,4:10:61.35:213,0,61	0/0:18,0:15:38.52:0,39,386	0/0:23,0:21:41.94:0,42,515	0/1:16,0:14:8.87:9,0,222	0/1:12,4:16:12.36:233,0,12	1/1:14,6:20:23.28:436,23,0	0/1:14,9:23:46.47:610,0,46	0/1:10,0:10:99:122,0,165	0/0:21,0:20:51.37:0,51,695	0/0:22,0:22:58.09:0,58,789	0/0:5,0:5:12.04:0,12,164
chr10	44020819	.	T	TC	1609.60	PASS	AB=0.949;AC=19;AF=0.365;AN=52;BaseQRankSum=9.809;DP=431;FS=1.986;HRun=2;HaplotypeScore=351.1707;InbreedingCoeff=0.0681;MQ=29.09;MQ0=9;MQRankSum=-1.989;QD=6.17;ReadPosRankSum=5.008;VQSLOD=0.6600;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:44.71:0,45,317	1/1:9,0:9:11.12:130,11,0	./.	./.	0/0:28,0:26:40.82:0,41,449	0/0:5,0:5:15.05:0,15,185	0/0:13,0:11:30.08:0,30,358	0/1:25,2:26:62.51:63,0,505	0/0:8,0:8:18.04:0,18,207	0/1:10,3:11:71.56:72,0,103	0/1:7,2:9:53.71:77,0,54	0/1:18,0:18:14.25:99,0,14	0/1:18,0:16:29.40:70,0,29	1/1:22,0:23:15.35:178,15,0	1/1:22,0:22:47.01:358,47,0	1/1:22,0:22:48.57:334,49,0	0/1:18,0:17:5.28:154,0,5	0/1:10,0:10:22.40:63,0,22	0/0:11,0:8:17.76:0,18,147	0/0:21,0:19:39.33:0,39,408	0/0:15,0:14:0.56:0,1,111	0/1:16,0:16:13.21:13,0,95	0/1:21,0:21:28.37:42,0,28	0/1:22,1:23:39.84:72,0,40	0/1:11,1:12:56.63:57,0,147	0/0:20,0:19:50.72:0,51,463	0/0:22,0:22:57.21:0,57,571	0/0:5,0:5:9.29:0,9,87
chr10	44020824	.	CCTT	C	1291.06	PASS	AB=0.902;AC=15;AF=0.288;AN=52;BaseQRankSum=8.501;DP=441;FS=12.164;HRun=0;HaplotypeScore=371.0479;InbreedingCoeff=-0.1475;MQ=29.17;MQ0=10;MQRankSum=-1.600;QD=5.49;ReadPosRankSum=2.813;VQSLOD=1.0924;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:39.40:0,39,375	0/1:5,2:7:2.86:63,0,3	./.	./.	0/0:31,0:29:57.97:0,58,614	0/0:6,0:6:17.97:0,18,208	0/0:13,0:11:29.68:0,30,429	0/0:26,0:25:60.59:0,61,629	0/0:9,0:9:24:0,24,313	0/1:13,0:11:6.44:54,0,6	0/1:9,0:9:14.17:34,0,14	0/1:15,3:18:85.36:137,0,85	0/1:14,4:16:93.94:175,0,94	0/1:16,7:23:99:133,0,127	0/1:18,3:21:99:131,0,112	0/1:21,3:24:84.16:84,0,288	0/1:18,0:17:34.90:73,0,35	0/1:9,1:10:28.17:28,0,126	0/0:13,0:9:18.25:0,18,159	0/0:23,0:21:41.51:0,42,363	0/0:16,0:14:19.53:0,20,147	0/1:16,0:16:19.72:205,0,20	0/1:18,3:21:39.88:160,0,40	0/1:22,1:24:34.14:34,0,150	1/1:13,0:13:23.04:138,23,0	0/0:22,0:21:39.60:0,40,411	0/0:22,0:22:58.73:0,59,566	0/0:5,0:5:8.98:0,9,75
chr10	44020826	.	TTCC	T	3164.26	PASS	AB=0.960;AC=18;AF=0.346;AN=52;BaseQRankSum=6.330;DP=438;FS=69.764;HRun=0;HaplotypeScore=361.0706;InbreedingCoeff=0.2019;MQ=29.26;MQ0=11;MQRankSum=-1.913;QD=13.58;ReadPosRankSum=3.502;VQSLOD=0.9287;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:27.70:0,28,292	1/1:6,1:7:17.99:180,18,0	./.	./.	0/0:32,0:30:47.60:0,48,571	0/0:7,0:7:11.46:0,11,123	0/0:13,0:11:24.20:0,24,279	0/0:25,0:23:27.98:0,28,215	0/0:9,0:9:17.18:0,17,184	0/1:12,0:10:6.41:86,0,6	0/1:9,0:9:30.75:50,0,31	0/1:18,0:18:13.74:340,0,14	0/1:18,0:16:44.06:322,0,44	0/1:23,0:23:26.57:346,0,27	0/1:17,4:21:0.43:351,0,0	0/1:22,2:24:99:260,0,141	1/1:13,5:17:33.43:309,33,0	0/1:8,2:10:59.33:76,0,59	0/0:13,0:9:14.71:0,15,111	0/0:23,0:21:34.50:0,35,433	0/0:15,0:13:13.72:0,14,125	0/1:16,0:16:11.32:332,0,11	1/1:21,0:21:10.21:408,10,0	0/1:24,0:24:72.34:119,0,72	1/1:12,0:12:23.58:159,24,0	0/0:22,0:21:48.36:0,48,438	0/0:21,0:21:53.38:0,53,623	0/0:5,0:5:8.99:0,9,77
chr10	44020828	.	CCT	C	3822.30	PASS	AB=0.848;AC=17;AF=0.327;AN=52;BaseQRankSum=5.826;DP=433;FS=13.911;HRun=0;HaplotypeScore=351.6045;InbreedingCoeff=0.0662;MQ=29.10;MQ0=11;MQRankSum=-1.378;QD=16.62;ReadPosRankSum=4.409;VQSLOD=2.6019;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:37.08:0,37,417	1/1:7,0:7:16.86:126,17,0	./.	./.	0/0:32,0:30:62.79:0,63,826	0/0:5,0:5:14.95:0,15,160	0/0:13,0:11:30.07:0,30,382	0/0:22,1:21:34.93:0,35,225	0/0:9,0:9:21.07:0,21,277	0/1:12,0:10:45.19:72,0,45	0/1:7,1:8:33.20:100,0,33	0/1:9,9:18:99:411,0,145	0/1:11,7:16:99:402,0,132	0/1:17,6:23:99:432,0,149	0/1:21,0:21:99:298,0,103	0/1:24,0:24:99:219,0,330	1/1:16,0:16:24.08:286,24,0	0/1:10,0:10:66.19:90,0,66	0/0:12,0:8:18.02:0,18,207	0/0:24,0:22:42.11:0,42,613	0/0:15,0:13:14.39:0,14,144	0/1:12,4:16:38.31:462,0,38	0/1:9,12:21:2.31:504,0,2	0/1:19,5:24:99:160,0,161	1/1:10,2:12:30.24:260,30,0	0/0:24,0:23:60.16:0,60,738	0/0:21,0:21:59.35:0,59,839	0/0:5,0:5:9.03:0,9,113
chr10	44020829	.	C	CCT	4227.14	PASS	AB=0.897;AC=21;AF=0.404;AN=52;BaseQRankSum=3.485;DP=438;FS=13.447;HRun=0;HaplotypeScore=362.6891;InbreedingCoeff=0.2080;MQ=29.08;MQ0=11;MQRankSum=-1.736;QD=16.51;ReadPosRankSum=3.028;VQSLOD=4.0728;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:39.04:0,39,418	1/1:3,0:6:10.10:62,10,0	./.	./.	0/0:33,0:31:43.28:0,43,795	0/0:5,0:5:11.40:0,11,160	0/0:13,0:11:28.22:0,28,369	0/1:18,0:17:20.89:65,0,21	0/0:9,0:9:18.72:0,19,259	1/1:9,7:14:17.07:417,17,0	1/1:3,4:8:3.88:269,4,0	0/1:19,0:19:81.83:319,0,82	0/1:18,0:16:99:313,0,103	0/1:23,0:23:85.53:323,0,86	0/1:15,0:20:49.02:259,0,49	0/1:17,0:23:99:200,0,261	1/1:9,3:15:9.84:237,10,0	0/1:8,0:9:62.36:82,0,62	0/0:12,0:8:17.89:0,18,214	0/0:24,0:22:41.74:0,42,587	0/0:15,0:13:9.52:0,10,134	0/1:8,8:16:32.25:480,0,32	1/1:23,0:23:10.57:416,11,0	0/1:24,1:25:99:159,0,107	1/1:5,10:15:33.11:627,33,0	0/0:24,0:23:59.90:0,60,719	0/0:21,0:21:59.13:0,59,806	0/0:5,0:5:9.03:0,9,135
chr10	44020830	.	TCCC	T	4529.02	PASS	AB=1.000;AC=31;AF=0.596;AN=52;BaseQRankSum=5.445;DP=406;FS=55.147;HRun=3;HaplotypeScore=341.4558;InbreedingCoeff=0.3080;MQ=29.08;MQ0=11;MQRankSum=-1.260;QD=16.84;ReadPosRankSum=2.960;VQSLOD=0.4522;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:20,0:20:15.17:15,0,188	1/1:5,0:7:21.01:237,21,0	./.	./.	0/0:32,0:30:0.16:0,0,538	0/1:5,0:5:8.22:8,0,93	0/1:12,0:10:16.87:17,0,197	1/1:4,0:2:2.92:17,3,0	0/1:8,0:8:21.88:22,0,132	0/0:16,0:14:4.27:0,4,65	0/1:9,0:9:12.09:12,0,29	1/1:16,2:19:41.92:466,42,0	1/1:14,4:16:22.20:402,22,0	1/1:14,7:21:54.28:499,54,0	1/1:14,3:17:45.46:635,45,0	1/1:19,3:22:24.10:526,24,0	1/1:15,0:14:38.55:413,39,0	1/1:7,1:8:9.19:147,9,0	0/1:12,0:8:15.70:16,0,57	0/0:24,0:22:15.58:0,16,424	0/0:13,0:11:7.64:0,8,97	1/1:16,0:16:25.99:331,26,0	1/1:18,3:21:47.42:509,47,0	1/1:19,1:20:4.58:219,5,0	0/1:15,0:15:38.43:38,0,71	0/0:25,0:24:9.96:0,10,428	0/0:22,0:22:21.68:0,22,616	0/0:5,0:5:7.27:0,7,81
chr10	44020834	.	TCCC	T	4302.71	PASS	AB=1.000;AC=28;AF=0.538;AN=52;BaseQRankSum=7.088;DP=390;FS=38.430;HRun=3;HaplotypeScore=332.7339;InbreedingCoeff=0.6864;MQ=28.89;MQ0=10;MQRankSum=1.220;QD=18.39;ReadPosRankSum=3.336;VQSLOD=0.1042;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:19,0:19:3.82:4,0,230	1/1:4,4:8:21.06:270,21,0	./.	./.	0/0:30,0:29:33.80:0,34,422	0/0:4,0:4:9.03:0,9,134	0/0:10,0:8:20.79:0,21,252	1/1:4,0:2:0.47:1,0,0	0/1:7,0:7:1.52:2,0,144	0/0:16,0:14:17.93:0,18,180	0/0:10,0:10:5.82:0,6,132	1/1:18,0:19:40.66:396,41,0	1/1:17,0:16:22.29:354,22,0	1/1:20,0:20:58.49:489,58,0	1/1:9,9:18:47.19:550,47,0	1/1:12,8:20:33.20:488,33,0	1/1:3,12:14:36.07:438,36,0	1/1:4,3:7:11.53:144,12,0	0/1:10,0:6:11.62:12,0,51	0/0:23,0:21:16.29:0,16,306	0/0:13,0:11:7.08:0,7,77	1/1:6,9:15:29.16:486,29,0	1/1:22,0:22:47.77:431,48,0	1/1:18,0:18:21.92:232,22,0	0/1:15,0:15:4.14:4,0,197	0/0:25,0:24:28.76:0,29,296	0/0:21,0:21:26.73:0,27,415	0/0:4,0:4:7.24:0,7,53
chr10	44020837	.	C	CT	2964.81	PASS	AB=1.000;AC=24;AF=0.480;AN=50;BaseQRankSum=6.693;DP=394;FS=48.270;HRun=1;HaplotypeScore=331.6825;InbreedingCoeff=0.8016;MQ=29.20;MQ0=11;MQRankSum=-0.850;QD=13.73;ReadPosRankSum=1.803;VQSLOD=0.3471;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:6.57:0,7,109	1/1:8,1:9:20.89:196,21,0	./.	./.	0/0:29,0:29:37.68:0,38,246	0/0:3,0:3:9.03:0,9,117	0/0:13,0:11:26.98:0,27,283	./.	0/0:6,0:6:15.05:0,15,194	0/0:17,0:15:12.33:0,12,90	0/0:10,0:10:23.78:0,24,122	1/1:19,0:19:22.65:264,23,0	1/1:17,0:16:22.78:199,23,0	1/1:20,2:22:50.57:364,51,0	1/1:21,0:21:58.55:451,59,0	1/1:20,0:20:35.99:329,36,0	1/1:14,1:14:32.01:314,32,0	1/1:7,0:7:11.90:122,12,0	0/1:10,0:6:3.99:13,0,4	0/0:23,0:21:14.91:0,15,124	0/0:10,0:8:3.66:0,4,17	1/1:15,0:15:31.72:390,32,0	1/1:19,2:22:43.51:284,44,0	1/1:18,1:19:28.12:230,28,0	0/0:15,0:15:31.65:0,32,137	0/0:24,0:23:20.65:0,21,117	0/1:20,0:20:6.11:6,0,105	0/0:4,0:4:6.52:0,7,28
chr10	44020838	.	TCCC	T	4935.96	PASS	AB=1.000;AC=23;AF=0.460;AN=50;BaseQRankSum=7.183;DP=375;FS=38.684;HRun=3;HaplotypeScore=320.6768;InbreedingCoeff=0.7265;MQ=29.45;MQ0=11;MQRankSum=0.110;QD=24.56;ReadPosRankSum=3.722;VQSLOD=0.4954;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:17,0:17:5.81:6,0,95	0/1:9,0:9:3.66:53,0,4	./.	./.	0/0:26,3:28:24.07:0,24,318	0/0:4,0:4:12.03:0,12,160	0/0:13,0:11:30.03:0,30,385	./.	0/0:6,0:6:15.05:0,15,235	0/0:15,0:14:20.18:0,20,196	0/0:10,0:10:23.89:0,24,161	1/1:7,10:18:30.82:624,31,0	1/1:6,11:16:23.47:577,23,0	1/1:9,13:22:65.70:861,66,0	1/1:16,0:19:56.97:616,57,0	1/1:15,0:18:35.58:437,36,0	1/1:14,0:13:26.07:200,26,0	1/1:6,0:7:12.64:150,13,0	0/1:9,0:5:9.57:34,0,10	0/0:22,0:20:14.24:0,14,280	0/0:9,0:8:4.23:0,4,33	1/1:11,4:15:27.59:296,28,0	1/1:6,15:21:45.99:735,46,0	1/1:9,6:15:26.25:348,26,0	0/0:15,0:15:36.38:0,36,267	0/0:22,0:21:3.59:0,4,223	0/0:20,0:20:11.81:0,12,315	0/0:4,0:4:6.74:0,7,38
chr10	44020841	.	C	CT	2938.45	PASS	AB=1.000;AC=20;AF=0.400;AN=50;BaseQRankSum=6.735;DP=382;FS=23.608;HRun=1;HaplotypeScore=322.0014;InbreedingCoeff=0.8059;MQ=29.47;MQ0=10;MQRankSum=-0.686;QD=16.79;ReadPosRankSum=1.645;VQSLOD=0.2452;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:8.51:0,9,93	0/0:9,0:9:9.86:0,10,48	./.	./.	0/0:29,0:28:44.88:0,45,240	0/0:4,0:4:12.03:0,12,141	0/0:13,0:11:27.08:0,27,335	./.	0/0:6,0:6:15.04:0,15,181	0/0:18,0:16:17.79:0,18,116	0/0:10,0:10:22.04:0,22,119	1/1:18,0:18:34.38:386,34,0	1/1:17,0:16:28.96:333,29,0	1/1:17,5:22:64.48:592,64,0	1/1:16,4:20:56.24:440,56,0	1/1:17,0:17:36.44:301,36,0	0/1:14,0:13:15.52:57,0,16	1/1:6,1:7:11.04:109,11,0	0/1:8,0:5:0.93:1,0,5	0/0:23,0:21:19.63:0,20,139	0/0:9,0:8:2.77:0,3,15	1/1:16,0:16:18.22:164,18,0	1/1:18,3:21:45.96:476,46,0	1/1:13,2:15:28.54:275,29,0	0/0:17,0:17:34.48:0,34,152	0/0:23,0:22:19.78:0,20,110	0/0:20,0:20:24.07:0,24,127	0/0:5,0:5:8.33:0,8,38
chr10	44020845	.	C	CT	1236.02	PASS	AB=1.000;AC=12;AF=0.231;AN=52;BaseQRankSum=5.860;DP=388;FS=23.946;HRun=1;HaplotypeScore=328.0724;InbreedingCoeff=0.4349;MQ=29.29;MQ0=10;MQRankSum=-2.324;QD=9.36;ReadPosRankSum=-0.585;VQSLOD=-0.3567;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:12.72:0,13,119	0/0:9,0:9:22.57:0,23,103	./.	./.	0/0:29,0:28:48.21:0,48,258	0/0:4,0:4:9.03:0,9,116	0/0:13,0:11:27.04:0,27,321	0/0:6,0:2:2.94:0,3,18	0/0:5,0:5:12.03:0,12,142	0/0:17,1:16:22.94:0,23,136	0/0:10,0:10:24.54:0,25,135	0/1:19,0:19:17.02:33,0,17	0/1:18,0:17:21.82:33,0,22	0/1:23,0:23:25.61:26,0,47	1/1:15,5:20:57.88:596,58,0	1/1:17,0:17:40.54:414,41,0	0/1:15,0:14:45.47:45,0,65	1/1:6,1:7:11.81:136,12,0	0/0:8,0:5:0.23:0,0,5	0/0:22,0:20:25.22:0,25,160	0/0:7,0:6:2.80:0,3,16	0/0:17,0:17:21.02:0,21,85	0/0:22,0:22:21.86:0,22,71	1/1:13,0:13:6.88:114,7,0	0/0:18,0:18:41.90:0,42,189	0/0:23,0:22:31.19:0,31,145	0/0:21,0:21:28.80:0,29,157	0/0:4,0:4:8.44:0,8,40
chr10	44021941	.	AG	A	1870.99	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=14.588;DP=381;FS=1.987;HRun=1;HaplotypeScore=210.1852;InbreedingCoeff=0.9040;MQ=87.79;MQ0=0;MQRankSum=-14.319;QD=6.88;ReadPosRankSum=3.431;VQSLOD=0.9664;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,19:22:39.78:159,40,0	1/1:1,6:7:13.58:48,14,0	0/0:18,0:18:46.47:0,46,641	0/0:19,1:20:31.68:0,32,603	1/1:0,8:8:14.69:50,15,0	0/0:16,0:16:48.16:0,48,765	0/0:28,0:28:84.29:0,84,1337	1/1:0,6:6:16.97:84,17,0	0/0:27,0:27:81.22:0,81,1240	1/1:1,13:14:26.17:141,26,0	1/1:0,7:8:0.96:35,1,0	1/1:0,14:14:27.41:92,27,0	1/1:0,15:15:23.68:76,24,0	1/1:0,12:12:25.01:110,25,0	1/1:1,24:25:46.58:150,47,0	1/1:0,14:14:23.90:79,24,0	1/1:0,11:11:23.58:91,24,0	1/1:0,10:10:21.55:101,22,0	1/1:1,4:5:11.42:59,11,0	1/1:0,11:11:22.56:79,23,0	1/1:1,9:10:17.17:78,17,0	1/1:0,12:12:22.76:72,23,0	1/1:0,10:10:18.04:83,18,0	1/1:0,12:12:15.86:43,16,0	1/1:0,13:13:30.68:108,31,0	1/1:1,12:13:32.63:149,33,0	1/1:2,15:17:31.49:128,31,0	1/1:0,3:3:8.19:36,8,0
chr10	44021947	.	A	AG	6546.54	PASS	AB=1.000;AC=47;AF=0.839;AN=56;BaseQRankSum=15.037;DP=507;FS=7.790;HRun=2;HaplotypeScore=269.8180;InbreedingCoeff=0.9034;MQ=77.29;MQ0=0;MQRankSum=-14.912;QD=16.01;ReadPosRankSum=1.159;VQSLOD=3.7284;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:13,19:32:60.96:460,61,0	1/1:3,6:9:17.43:100,17,0	0/1:18,0:18:0.68:1,0,458	0/0:20,0:20:49.93:0,50,633	1/1:2,8:10:23.49:217,23,0	0/0:16,0:16:48.16:0,48,671	0/0:34,0:34:96.29:0,96,1300	1/1:8,6:14:41.90:395,42,0	0/0:28,0:28:81.27:0,81,1131	1/1:8,13:21:50.78:370,51,0	1/1:3,6:9:9.75:83,10,0	1/1:6,14:20:49.34:322,49,0	1/1:2,15:17:42.70:229,43,0	1/1:6,12:18:43.72:314,44,0	1/1:5,24:29:74.45:432,74,0	1/1:9,14:23:52.29:369,52,0	1/1:5,11:16:35.37:239,35,0	1/1:2,10:12:26.72:191,27,0	1/1:9,4:13:35.90:317,36,0	1/1:2,11:13:32.07:236,32,0	1/1:12,9:21:43.17:369,43,0	1/1:4,12:16:40.51:287,41,0	1/1:6,9:15:37.73:294,38,0	1/1:6,12:18:36.08:188,36,0	1/1:6,13:19:50.01:357,50,0	1/1:11,12:23:56.45:426,56,0	1/1:5,15:20:46.37:289,46,0	1/1:0,3:3:8.92:63,9,0
chr10	44022270	.	A	AT	13305.96	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=14.578;DP=560;FS=0.000;HRun=1;HaplotypeScore=153.0911;InbreedingCoeff=0.9913;MQ=87.00;MQ0=0;MQRankSum=-11.153;QD=30.38;ReadPosRankSum=4.431;VQSLOD=4.4882;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,26:28:66.21:835,66,0	1/1:2,11:13:27.56:345,28,0	0/0:29,0:29:81.14:0,81,973	0/0:23,0:23:54.08:0,54,742	1/1:4,14:18:25.02:499,25,0	0/0:18,0:18:54.18:0,54,701	0/0:24,0:24:72.23:0,72,934	1/1:7,12:19:24.08:303,24,0	0/0:28,0:28:84.27:0,84,1091	1/1:5,11:16:39.11:473,39,0	1/1:1,13:14:33.11:418,33,0	1/1:2,17:19:47.79:604,48,0	1/1:1,14:15:42.09:522,42,0	1/1:1,17:18:48.15:611,48,0	1/1:0,21:21:57.18:729,57,0	1/1:2,22:24:59.73:764,60,0	1/1:2,23:25:66.18:823,66,0	1/1:2,21:23:57.61:704,58,0	1/1:3,17:20:24.84:484,25,0	1/1:3,19:22:52.05:646,52,0	1/1:0,16:16:36.12:458,36,0	1/1:1,18:19:51.15:638,51,0	1/1:2,20:22:54.63:674,55,0	1/1:1,14:15:39.12:497,39,0	1/1:1,18:19:48.07:580,48,0	1/1:5,17:22:54.15:670,54,0	1/1:3,22:25:70.45:874,70,0	1/1:1,4:5:12.04:153,12,0
chr10	44022410	.	TGC	T	5074.07	PASS	AB=0.659;AC=36;AF=0.643;AN=56;BaseQRankSum=13.949;DP=472;FS=1.792;HRun=0;HaplotypeScore=221.1851;InbreedingCoeff=0.2539;MQ=89.19;MQ0=0;MQRankSum=-14.561;QD=14.25;ReadPosRankSum=6.658;VQSLOD=4.2344;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,19:27:31.39:370,31,0	1/1:1,7:8:21:183,21,0	0/0:27,0:27:78.27:0,78,1516	0/0:21,0:21:57.17:0,57,1025	0/1:8,10:18:24.20:112,0,24	0/0:18,0:18:54.19:0,54,1065	0/0:27,0:27:81.24:0,81,1525	0/1:10,8:18:55.29:236,0,55	0/0:23,0:23:69.24:0,69,1366	0/1:8,8:16:35.28:213,0,35	1/1:4,10:14:6:143,6,0	1/1:4,13:17:24.68:321,25,0	1/1:4,12:16:38.49:315,38,0	1/1:3,13:16:31.33:370,31,0	0/1:6,12:18:16.27:225,0,16	1/1:3,14:17:47.99:415,48,0	0/1:10,8:18:1.46:202,0,1	1/1:2,5:7:15.48:137,15,0	1/1:8,5:13:5.15:152,5,0	1/1:3,10:13:20.99:180,21,0	1/1:7,8:15:27:244,27,0	0/1:9,5:14:14.25:83,0,14	0/1:7,9:16:6.18:131,0,6	1/1:8,13:21:21.85:176,22,0	0/1:6,8:14:2.95:180,0,3	0/1:7,11:18:21.80:251,0,22	1/1:1,17:18:22.03:389,22,0	0/1:2,2:4:24.58:46,0,25
chr10	44022415	.	AAAAGCAGCAAGGG	A	20005.02	PASS	AB=0.622;AC=33;AF=0.589;AN=56;BaseQRankSum=16.252;DP=444;FS=3.441;HRun=0;HaplotypeScore=255.5853;InbreedingCoeff=0.0459;MQ=88.35;MQ0=0;MQRankSum=-12.776;QD=61.18;ReadPosRankSum=9.517;VQSLOD=3.4441;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:6,19:25:20.26:1591,0,20	1/1:2,6:8:21.07:719,21,0	0/0:28,0:28:84.27:0,84,4215	0/0:16,0:16:48.14:0,48,2390	0/1:7,10:17:37.26:609,0,37	0/0:21,0:21:63.19:0,63,3865	0/0:29,0:29:87.29:0,87,5648	1/1:7,8:15:8.35:829,8,0	0/0:23,0:23:69.22:0,69,4308	1/1:5,8:13:2.35:713,2,0	0/1:5,9:14:32.30:586,0,32	1/1:3,13:16:21.68:1242,22,0	0/1:3,12:15:15.86:1187,0,16	1/1:1,13:14:39.61:1341,40,0	0/1:6,12:18:50.60:1054,0,51	1/1:1,14:15:23.75:1421,24,0	0/1:8,8:16:23.43:924,0,23	0/1:1,5:6:1.71:503,0,2	0/1:7,5:12:17.43:508,0,17	1/1:2,10:12:21.07:678,21,0	1/1:5,8:13:30.10:1007,30,0	0/1:7,5:12:23.34:295,0,23	0/1:5,9:14:31.89:510,0,32	0/1:6,13:19:33.06:586,0,33	0/1:6,8:14:8.57:797,0,9	1/1:6,11:17:13.49:1029,13,0	1/1:1,17:18:51.16:1674,51,0	0/1:2,2:4:11.96:200,0,12
chr10	44022420	.	C	CTGACATCTG	7347.54	PASS	AB=0.979;AC=23;AF=0.411;AN=56;BaseQRankSum=0.307;DP=356;FS=2.767;HRun=0;HaplotypeScore=235.2334;InbreedingCoeff=-0.5495;MQ=96.31;MQ0=0;MQRankSum=-9.613;QD=30.61;ReadPosRankSum=0.043;VQSLOD=4.5576;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:20,0:20:99:952,0,209	0/1:6,0:7:99:265,0,155	0/0:26,0:26:54.59:0,55,2156	0/0:18,0:18:51.14:0,51,1330	0/1:11,0:11:99:200,0,167	0/0:20,0:20:57.20:0,57,1859	0/0:29,0:29:84.29:0,84,2732	1/1:8,0:8:24.08:805,24,0	0/0:21,0:21:63.22:0,63,2052	0/1:8,0:8:99:108,0,183	0/1:9,0:10:99:313,0,122	0/1:14,0:14:99:234,0,401	0/1:12,0:12:99:302,0,440	0/1:13,0:13:99:592,0,331	0/1:14,0:14:99:218,0,341	0/1:14,0:14:76.21:76,0,663	0/1:8,1:10:99:356,0,279	0/1:5,0:5:53.80:159,0,54	0/1:5,0:5:47.46:290,0,47	0/1:11,0:11:59.59:220,0,60	0/1:8,3:11:8.72:797,0,9	0/1:5,0:5:53.38:203,0,53	0/1:10,0:10:99:124,0,206	0/1:14,1:15:98.79:99,0,245	0/1:8,0:8:99:258,0,244	0/1:11,0:11:99:283,0,293	0/1:18,0:18:99:492,0,372	0/0:2,0:2:6.02:0,6,125
chr10	44022813	.	TGTG	T	1554.76	PASS	AB=0.985;AC=33;AF=0.611;AN=54;BaseQRankSum=5.686;DP=516;FS=5.624;HRun=0;HaplotypeScore=163.3862;InbreedingCoeff=0.0727;MQ=39.37;MQ0=48;MQRankSum=-3.046;QD=4.40;ReadPosRankSum=-1.380;VQSLOD=2.1466;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:34,0:30:3.22:67,3,0	0/1:3,0:3:0:0,0,0	0/0:43,0:6:14.80:0,15,176	0/0:44,0:8:18.05:0,18,221	0/1:12,0:12:15.13:29,0,15	0/0:25,0:23:44.15:0,44,627	0/0:30,0:29:36.51:0,37,812	0/1:19,0:14:43.22:43,0,127	0/0:15,0:14:29.68:0,30,451	0/1:19,0:18:50.71:317,0,51	./.	0/1:16,2:17:1.24:93,0,1	1/1:14,0:13:2.91:79,3,0	1/1:16,0:12:3.01:34,3,0	0/1:21,0:20:4.48:4,0,16	1/1:17,0:16:6.03:28,6,0	0/1:13,0:11:99:111,0,150	0/1:17,0:12:27.79:169,0,28	0/1:7,0:6:13.57:34,0,14	1/1:7,0:6:8.20:57,8,0	1/1:26,0:19:0.61:28,1,0	1/1:13,2:13:11.33:136,11,0	0/1:15,0:13:17.16:19,0,17	1/1:28,0:25:4.56:67,5,0	1/1:12,0:11:0.61:2,1,0	0/1:13,0:10:12.44:140,0,12	1/1:21,0:18:13.77:242,14,0	1/1:3,0:2:2.84:14,3,0
chr10	44022815	.	TG	T	1919.49	PASS	AB=0.734;AC=34;AF=0.654;AN=52;BaseQRankSum=5.126;DP=502;FS=10.399;HRun=2;HaplotypeScore=152.3845;InbreedingCoeff=0.1237;MQ=39.23;MQ0=46;MQRankSum=-3.363;QD=5.80;ReadPosRankSum=-1.278;VQSLOD=-0.6250;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:13,20:30:2.02:64,2,0	./.	0/0:45,0:7:14.55:0,15,175	0/0:49,0:9:17.03:0,17,219	1/1:8,4:12:0.94:36,1,0	0/0:25,0:23:43.35:0,43,506	0/0:29,0:28:54.86:0,55,810	0/1:15,2:12:48.53:49,0,113	0/0:14,1:14:27.64:0,28,376	0/1:10,8:17:34.15:328,0,34	./.	0/1:10,7:16:9.04:48,0,9	0/1:6,4:9:15.46:33,0,15	1/1:7,8:11:3.01:34,3,0	1/1:12,8:19:4.65:42,5,0	1/1:5,11:15:8.85:115,9,0	0/1:9,5:11:68.59:152,0,69	0/1:11,6:12:14.10:196,0,14	1/1:7,1:7:0.26:96,0,0	1/1:5,2:6:8.68:71,9,0	1/1:18,6:18:2.67:31,3,0	1/1:6,6:11:10.65:55,11,0	0/1:8,6:12:7.99:19,0,8	1/1:18,10:24:7.95:84,8,0	1/1:9,4:11:2.44:7,2,0	0/1:7,6:10:9.08:197,0,9	1/1:8,12:17:35.28:386,35,0	1/1:2,1:2:3.01:39,3,0
chr10	44022829	.	TGTGTG	T	7791.22	PASS	AB=0.755;AC=40;AF=0.714;AN=56;BaseQRankSum=10.367;DP=542;FS=15.786;HRun=0;HaplotypeScore=157.6279;InbreedingCoeff=0.3665;MQ=40.58;MQ0=45;MQRankSum=-7.424;QD=22.01;ReadPosRankSum=-2.316;VQSLOD=3.2812;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,21:32:39.04:793,39,0	1/1:1,1:2:3.01:59,3,0	0/0:55,0:8:21.46:0,21,454	0/0:66,0:18:49.36:0,49,938	1/1:4,8:13:7.30:211,7,0	0/0:20,0:18:42.14:0,42,1302	0/0:28,0:27:79.15:0,79,2409	1/1:18,3:16:13.10:403,13,0	0/0:19,0:18:48.16:0,48,1370	0/1:9,12:21:34.91:807,0,35	1/1:3,3:4:9.03:139,9,0	1/1:7,11:19:3.62:406,4,0	1/1:4,8:11:23.87:438,24,0	1/1:3,11:12:24.04:423,24,0	1/1:6,13:21:31.83:472,32,0	1/1:2,10:12:24.08:408,24,0	0/1:20,2:18:57.43:360,0,57	0/1:11,5:13:23.08:366,0,23	0/1:8,1:8:76.56:183,0,77	1/1:2,6:7:8.62:90,9,0	1/1:19,2:16:3.37:142,3,0	1/1:7,3:9:16.59:230,17,0	0/1:6,7:12:11.65:351,0,12	1/1:16,15:28:8.91:85,9,0	1/1:5,4:7:10.92:157,11,0	0/1:9,5:11:5.33:448,0,5	1/1:3,13:16:39.12:774,39,0	1/1:2,0:1:3.01:45,3,0
chr10	44022831	.	TGTG	T	5397.29	PASS	AB=0.981;AC=36;AF=0.643;AN=56;BaseQRankSum=10.997;DP=528;FS=22.321;HRun=0;HaplotypeScore=155.0574;InbreedingCoeff=0.2292;MQ=41.22;MQ0=42;MQRankSum=-7.729;QD=15.92;ReadPosRankSum=-2.481;VQSLOD=2.8612;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:34,0:32:49.74:686,50,0	1/1:2,0:2:3.01:40,3,0	0/0:56,0:9:24.53:0,25,397	0/0:67,0:19:51.57:0,52,856	0/1:12,0:12:11.10:144,0,11	0/0:20,0:18:42.14:0,42,981	0/0:27,0:26:78.26:0,78,1812	1/1:18,0:15:25.28:341,25,0	0/0:19,0:18:48.16:0,48,1043	0/1:21,0:20:20.61:408,0,21	1/1:6,0:4:9.03:120,9,0	1/1:18,0:18:23.29:315,23,0	1/1:12,0:11:6.49:209,6,0	1/1:14,0:12:24.04:306,24,0	1/1:19,1:20:15.02:399,15,0	1/1:12,0:12:24.08:330,24,0	0/1:15,4:18:0.42:238,0,0	0/1:14,0:13:25.26:176,0,25	0/1:9,0:8:49.32:136,0,49	1/1:8,0:7:8.62:90,9,0	0/1:21,0:15:0.18:128,0,0	0/1:8,0:8:9.77:106,0,10	0/1:13,0:12:16.68:252,0,17	1/1:30,0:26:3.30:42,3,0	0/1:8,0:6:6.06:125,0,6	0/1:14,0:11:5.94:270,0,6	1/1:18,0:16:39.10:485,39,0	1/1:2,0:1:3.01:53,3,0
chr10	44022833	.	TG	T	5428.82	PASS	AB=0.692;AC=45;AF=0.804;AN=56;BaseQRankSum=11.463;DP=513;FS=23.059;HRun=1;HaplotypeScore=142.9368;InbreedingCoeff=0.7355;MQ=42.26;MQ0=40;MQRankSum=-9.335;QD=16.97;ReadPosRankSum=-3.567;VQSLOD=2.9286;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:29,4:31:54.56:685,55,0	1/1:1,1:2:3.01:40,3,0	0/0:57,0:10:27.45:0,27,335	0/0:68,0:20:56.16:0,56,719	1/1:12,0:12:12.04:159,12,0	0/0:22,0:20:45.14:0,45,683	0/0:26,0:25:75.22:0,75,1151	1/1:9,10:15:44.90:508,45,0	0/0:20,0:19:51.15:0,51,747	1/1:17,2:18:18.15:322,18,0	1/1:4,0:3:9.03:120,9,0	1/1:15,3:17:26.92:295,27,0	1/1:10,2:11:20.74:226,21,0	1/1:13,1:12:24.03:291,24,0	1/1:17,3:20:32.91:394,33,0	1/1:13,0:12:24.02:297,24,0	1/1:15,4:16:30.75:282,31,0	1/1:8,6:13:22.67:184,23,0	0/1:5,4:7:26.14:173,0,26	1/1:7,0:6:6.02:80,6,0	1/1:16,4:15:18.74:163,19,0	1/1:5,2:7:8.92:119,9,0	1/1:8,4:11:23.89:292,24,0	1/1:24,4:24:3.44:41,3,0	1/1:6,2:6:12:140,12,0	1/1:8,4:9:23.48:225,23,0	1/1:16,0:15:38.71:377,39,0	1/1:2,0:1:2.94:18,3,0
chr10	44022834	.	G	GT	4805.39	PASS	AB=1.000;AC=45;AF=0.804;AN=56;BaseQRankSum=11.100;DP=534;FS=22.896;HRun=1;HaplotypeScore=155.3417;InbreedingCoeff=0.7423;MQ=42.06;MQ0=38;MQRankSum=-9.169;QD=14.01;ReadPosRankSum=-4.392;VQSLOD=2.0030;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:29,4:31:58.39:666,58,0	1/1:3,0:3:3.01:40,3,0	0/0:57,0:10:26.66:0,27,306	0/0:68,0:20:50.48:0,50,583	1/1:13,0:13:12.04:159,12,0	0/0:22,0:20:42.12:0,42,531	0/0:26,0:26:72.23:0,72,928	1/1:22,0:18:30.54:302,31,0	0/0:18,0:18:48.16:0,48,619	1/1:19,1:19:9.42:184,9,0	1/1:6,0:5:9.03:120,9,0	1/1:18,0:17:25.57:278,26,0	1/1:12,0:11:19.25:225,19,0	1/1:14,0:12:24.04:294,24,0	1/1:22,0:22:31.42:397,31,0	1/1:13,0:12:20.71:278,21,0	1/1:18,3:18:28.43:229,28,0	1/1:15,0:14:17.52:103,18,0	0/1:11,0:9:13.49:154,0,13	1/1:8,0:7:6.02:80,6,0	1/1:16,5:16:18.92:166,19,0	1/1:10,0:10:11.98:140,12,0	1/1:14,0:13:23.94:292,24,0	1/1:25,3:25:5.83:80,6,0	1/1:9,0:7:12:140,12,0	1/1:12,0:9:18.50:184,19,0	1/1:15,0:15:28.40:274,28,0	1/1:2,0:1:2.98:22,3,0
chr10	44022836	.	GTA	G	996.59	PASS	AB=1.000;AC=44;AF=0.786;AN=56;BaseQRankSum=11.478;DP=534;FS=4.666;HRun=0;HaplotypeScore=172.4503;InbreedingCoeff=0.6032;MQ=48.94;MQ0=31;MQRankSum=-8.664;QD=2.94;ReadPosRankSum=-0.760;VQSLOD=2.4170;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:32,1:31:18.51:62,19,0	1/1:4,0:4:1.82:5,2,0	0/0:59,0:13:35.76:0,36,366	0/0:70,0:22:10.28:0,10,379	1/1:12,0:13:5.45:16,5,0	0/0:20,0:18:29.17:0,29,562	0/0:28,0:28:51.73:0,52,1275	1/1:20,0:18:27.60:143,28,0	0/0:17,0:17:44.35:0,44,720	1/1:20,0:19:2.49:170,2,0	1/1:6,0:5:1.82:5,2,0	1/1:16,0:15:10.37:49,10,0	1/1:12,0:11:16.23:60,16,0	1/1:13,0:12:12.05:38,12,0	1/1:21,2:23:7.49:22,7,0	1/1:12,1:12:10.46:43,10,0	1/1:20,0:18:22.33:109,22,0	1/1:15,0:14:19.85:99,20,0	0/1:10,0:9:23.39:23,0,33	0/1:7,0:7:0:0,0,0	1/1:22,0:17:6.39:18,6,0	1/1:11,0:11:5.28:16,5,0	1/1:14,0:13:10.43:30,10,0	1/1:26,0:24:0.04:1,0,0	1/1:8,0:7:1.82:5,2,0	1/1:13,0:10:11.83:59,12,0	1/1:17,1:17:32.75:156,33,0	1/1:1,0:1:3.01:34,3,0
chr10	44023083	.	TC	T	9044.33	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=12.399;DP=664;FS=3.915;HRun=1;HaplotypeScore=87.4514;InbreedingCoeff=0.9998;MQ=75.13;MQ0=0;MQRankSum=-5.260;QD=37.84;ReadPosRankSum=3.038;VQSLOD=5.5015;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,102,1630	1/1:0,11:11:33.08:440,33,0	0/0:15,0:14:39.09:0,39,563	0/0:18,0:18:38.66:0,39,564	0/0:21,0:21:60.20:0,60,952	0/0:20,0:20:60.18:0,60,934	0/0:20,0:20:60.19:0,60,934	0/0:36,0:36:99:0,108,1664	0/0:24,0:24:72.23:0,72,1120	0/0:30,0:30:90.31:0,90,1430	0/0:11,0:11:27.09:0,27,431	1/1:1,17:18:48.13:649,48,0	1/1:2,13:15:42.08:548,42,0	1/1:2,22:24:69.15:920,69,0	1/1:0,25:25:69.16:922,69,0	1/1:6,23:29:84.24:1136,84,0	1/1:1,15:16:48.16:669,48,0	1/1:3,14:17:48.12:634,48,0	0/0:33,0:33:99:0,99,1540	0/0:25,0:25:69.24:0,69,1099	0/0:41,0:41:99:0,117,1818	1/1:0,24:24:63.21:880,63,0	1/1:2,17:18:51.13:690,51,0	1/1:7,34:41:99:1555,114,0	0/0:29,0:29:84.29:0,84,1339	0/0:22,0:22:66.22:0,66,1033	0/0:25,0:25:75.26:0,75,1195	0/0:20,0:20:60.20:0,60,959
chr10	44023143	.	GA	G	11205.98	PASS	AB=0.923;AC=31;AF=0.554;AN=56;BaseQRankSum=18.302;DP=618;FS=4.387;HRun=2;HaplotypeScore=108.4536;InbreedingCoeff=0.9321;MQ=76.09;MQ0=0;MQRankSum=-4.448;QD=33.45;ReadPosRankSum=0.845;VQSLOD=4.5326;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,123,1816	1/1:0,9:9:27.09:346,27,0	0/0:17,0:17:51.12:0,51,694	0/0:13,0:13:36.12:0,36,516	0/0:33,0:31:87.29:0,87,1296	0/0:15,0:15:42.14:0,42,629	0/0:20,0:20:57.19:0,57,854	1/1:1,26:27:78.23:997,78,0	0/0:25,0:25:75.22:0,75,1100	1/1:0,27:27:81.26:1050,81,0	1/1:0,14:14:36.12:465,36,0	1/1:1,15:16:48.16:622,48,0	1/1:1,20:21:60.19:778,60,0	1/1:3,21:24:69.21:880,69,0	1/1:0,25:25:69.22:895,69,0	1/1:1,20:21:60.18:765,60,0	1/1:1,17:18:51.17:660,51,0	1/1:0,13:13:36.12:467,36,0	0/0:23,0:23:69.23:0,69,1033	0/0:19,0:18:54.18:0,54,807	0/0:27,0:27:78.25:0,78,1148	1/1:0,25:25:66.21:856,66,0	1/1:0,25:24:63.20:817,63,0	1/1:1,28:29:72.23:933,72,0	1/1:0,17:17:51.17:662,51,0	0/1:22,2:24:11.72:12,0,815	0/0:32,0:32:96.30:0,96,1384	0/0:18,0:18:51.16:0,51,742
chr10	44023569	.	T	TG	1936.32	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=6.890;DP=547;FS=1.022;HRun=0;HaplotypeScore=92.5353;InbreedingCoeff=0.8486;MQ=35.62;MQ0=88;MQRankSum=-1.706;QD=10.14;ReadPosRankSum=3.790;VQSLOD=4.1287;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:19,10:20:30.57:254,31,0	0/0:3,0:2:5.90:0,6,43	0/0:48,0:2:1.42:0,1,18	0/0:64,0:7:9.42:0,9,57	1/1:26,6:23:26.86:260,27,0	0/0:14,0:11:22.11:0,22,152	0/0:17,0:13:23.63:0,24,142	0/0:19,0:12:24.33:0,24,162	0/0:17,0:14:22.83:0,23,157	0/0:19,0:17:38.09:0,38,252	0/0:18,0:18:23.43:0,23,152	0/0:7,0:7:10.99:0,11,60	0/0:10,0:10:16.35:0,16,95	0/0:9,0:8:11.87:0,12,80	0/0:17,0:17:23.80:0,24,170	0/0:6,0:5:8.64:0,9,57	0/0:24,0:19:26.92:0,27,184	0/0:17,0:8:11.71:0,12,81	1/1:27,7:27:40.66:457,41,0	1/1:13,12:22:53.21:377,53,0	1/1:13,2:10:1.10:58,1,0	0/0:8,0:7:14.88:0,15,107	0/0:9,0:9:14.74:0,15,95	0/0:16,0:12:11.90:0,12,85	0/0:14,0:13:29.60:0,30,200	1/1:10,10:14:32.70:247,33,0	1/1:19,8:22:56.42:413,56,0	1/1:8,1:3:8.92:63,9,0
chr10	44023573	.	TTTTTTTTTTTTTTTTTTGGTGG	T	946.52	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=0.522;DP=569;FS=10.766;HRun=0;HaplotypeScore=206.5373;InbreedingCoeff=0.3885;MQ=36.51;MQ0=91;MQRankSum=-1.048;QD=10.52;ReadPosRankSum=0.199;VQSLOD=1.8113;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:23:48.16:0,48,1620	0/0:3,0:2:5.38:0,5,53	0/0:57,0:4:4.88:0,5,302	0/0:75,0:10:20.50:0,21,672	0/0:36,0:27:39.32:0,39,1933	0/0:13,0:10:21.07:0,21,1394	0/0:17,0:13:24.08:0,24,1394	0/0:18,0:12:3.74:0,4,8	0/0:17,0:14:28.28:0,28,1428	0/1:19,0:17:0.50:300,0,1	1/1:8,9:17:0.47:155,0,0	0/0:8,0:7:13.42:0,13,84	0/0:10,0:10:8.98:0,9,115	0/0:9,0:8:9.03:0,9,159	0/1:16,0:16:80.49:80,0,95	0/0:6,0:5:5.38:0,5,66	0/0:22,0:18:18.47:0,18,152	0/0:16,0:8:6.02:0,6,65	0/0:31,0:27:58.04:0,58,1783	0/0:25,0:22:53.77:0,54,2018	0/0:13,0:9:15.15:0,15,361	0/1:8,0:7:23.40:121,0,23	0/0:9,0:9:8.39:0,8,97	1/1:16,0:12:6.02:113,6,0	1/1:13,1:13:5.23:309,5,0	0/0:20,0:15:30.10:0,30,1009	0/0:26,0:22:45.15:0,45,1624	0/0:9,0:2:6.02:0,6,217
chr10	44023578	.	TTTTTTTTTTTTTGGTGG	T	1484.67	PASS	AB=1.000;AC=24;AF=0.429;AN=56;BaseQRankSum=-4.178;DP=589;FS=20.399;HRun=0;HaplotypeScore=179.6586;InbreedingCoeff=0.3989;MQ=41.64;MQ0=89;MQRankSum=-1.541;QD=6.69;ReadPosRankSum=-4.227;VQSLOD=0.1360;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:25:26.16:26,0,726	1/1:4,0:4:3.83:61,4,0	0/0:69,0:5:11.35:0,11,229	0/0:86,0:14:32.13:0,32,808	0/1:39,0:30:99:176,0,894	0/0:10,0:8:21.07:0,21,946	0/0:17,0:13:24.08:0,24,877	0/0:17,0:11:0:0,0,1	0/0:16,0:13:24.88:0,25,932	1/1:16,0:14:5.40:235,5,0	1/1:17,0:17:2.97:118,3,0	0/0:7,0:6:1.41:0,1,3	1/1:12,0:12:2.16:57,2,0	1/1:10,0:9:2.78:59,3,0	1/1:16,0:16:6:158,6,0	0/0:9,0:8:0.47:0,0,1	0/0:23,0:19:0.26:0,0,1	1/1:16,0:10:5.95:118,6,0	0/0:28,0:22:31.14:0,31,790	0/0:28,0:23:13.28:0,13,1001	0/1:13,0:8:18.91:19,0,147	1/1:7,0:6:6.02:161,6,0	0/0:8,0:8:0.47:0,0,1	1/1:9,7:13:6.02:184,6,0	1/1:13,0:12:5.97:236,6,0	0/0:22,0:16:24.33:0,24,483	0/0:26,0:21:22.61:0,23,799	0/1:10,0:3:41.14:41,0,100
chr10	44023590	.	TGGTGG	T	8246.73	PASS	AB=0.769;AC=49;AF=0.875;AN=56;BaseQRankSum=-1.366;DP=452;FS=2.719;HRun=0;HaplotypeScore=98.6755;InbreedingCoeff=0.3665;MQ=58.10;MQ0=31;MQRankSum=-4.477;QD=25.93;ReadPosRankSum=2.052;VQSLOD=4.3292;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:26,1:29:48.16:752,48,0	1/1:0,3:3:3.01:59,3,0	0/0:61,0:13:11.03:0,11,335	0/0:71,0:17:13.90:0,14,523	1/1:26,1:30:17.79:1142,18,0	0/1:10,1:9:54.68:75,0,55	1/1:10,6:14:9.81:302,10,0	1/1:3,7:6:18.06:326,18,0	0/1:11,3:15:10.22:138,0,10	1/1:2,6:8:23.91:351,24,0	1/1:9,0:9:3.01:38,3,0	1/1:1,3:3:6.02:117,6,0	1/1:0,9:9:21.07:415,21,0	1/1:0,4:4:6.02:119,6,0	1/1:3,1:4:11.99:196,12,0	0/1:3,6:8:0:0,0,0	1/1:3,9:11:8.89:178,9,0	1/1:3,4:5:6.02:119,6,0	1/1:17,0:21:53.91:786,54,0	1/1:22,0:25:60.19:936,60,0	1/1:7,0:6:14.50:155,14,0	1/1:3,0:3:3.01:39,3,0	1/1:0,3:3:3.01:59,3,0	1/1:7,0:7:6.02:99,6,0	1/1:2,8:10:27.06:454,27,0	1/1:19,1:18:35.78:539,36,0	1/1:15,1:17:45.15:715,45,0	1/1:10,0:5:9.03:138,9,0
chr10	44023591	.	GGTGGT	G	8678.41	PASS	AB=1.000;AC=47;AF=0.870;AN=54;BaseQRankSum=-1.768;DP=439;FS=0.702;HRun=0;HaplotypeScore=95.6457;InbreedingCoeff=0.2780;MQ=58.95;MQ0=30;MQRankSum=-3.976;QD=29.12;ReadPosRankSum=2.516;VQSLOD=4.6389;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,25:28:48.15:978,48,0	1/1:3,0:3:3.01:39,3,0	0/0:62,0:13:22.23:0,22,369	0/0:71,0:17:11.26:0,11,487	1/1:6,23:29:10.12:1410,10,0	0/1:11,0:9:54.86:55,0,109	0/1:18,0:15:27.22:182,0,27	1/1:9,0:6:17.27:201,17,0	0/1:15,0:15:73.75:74,0,81	1/1:8,0:8:18.75:217,19,0	1/1:9,0:9:3.01:35,3,0	1/1:4,0:3:6.02:77,6,0	1/1:9,0:9:21.07:271,21,0	1/1:4,0:4:6.02:82,6,0	1/1:5,0:5:14.91:155,15,0	./.	1/1:11,0:10:8.88:117,9,0	1/1:8,0:5:6.02:77,6,0	1/1:6,14:19:51.17:1052,51,0	1/1:5,21:24:60.19:1210,60,0	1/1:8,1:5:12.01:203,12,0	1/1:3,0:3:3.01:35,3,0	1/1:3,0:3:3.01:39,3,0	1/1:7,0:7:6.02:74,6,0	1/1:10,0:10:25.63:311,26,0	1/1:7,13:16:38.94:722,39,0	1/1:5,13:17:45.15:883,45,0	1/1:7,4:5:9.03:179,9,0
chr10	44023592	.	GT	G	700.62	PASS	AB=0.970;AC=47;AF=0.870;AN=54;BaseQRankSum=3.206;DP=435;FS=2.842;HRun=1;HaplotypeScore=107.7616;InbreedingCoeff=0.2444;MQ=59.22;MQ0=29;MQRankSum=-6.030;QD=2.02;ReadPosRankSum=1.186;VQSLOD=-0.6977;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:28:23.20:72,23,0	1/1:3,0:3:2.22:7,2,0	0/1:55,6:13:38.41:38,0,109	0/0:65,3:17:13.75:0,14,206	1/1:29,0:29:4.69:79,5,0	0/0:11,0:9:2.55:0,3,96	0/1:18,0:15:13.63:14,0,45	1/1:8,0:6:11.10:35,11,0	0/1:15,0:15:10:10,0,86	1/1:8,0:8:10.33:33,10,0	1/1:9,0:9:2.22:7,2,0	1/1:4,0:3:4.44:13,4,0	1/1:9,0:9:15.54:48,16,0	1/1:4,0:4:4.44:14,4,0	1/1:5,0:5:8.22:25,8,0	./.	1/1:11,0:10:6.32:20,6,0	1/1:8,0:5:4.44:14,4,0	1/1:20,0:19:25.82:77,26,0	1/1:26,0:24:32.98:90,33,0	1/1:9,0:5:4.53:12,5,0	1/1:3,0:3:2.22:7,2,0	1/1:3,0:3:2.12:7,2,0	1/1:7,0:7:4.44:14,4,0	1/1:10,0:10:17.76:55,18,0	1/1:20,0:16:21.54:62,22,0	1/1:18,0:17:23.27:66,23,0	1/1:11,0:5:3.54:11,4,0
chr10	44023716	.	AG	A	9197.65	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=13.959;DP=553;FS=0.672;HRun=2;HaplotypeScore=91.6249;InbreedingCoeff=0.9936;MQ=83.97;MQ0=0;MQRankSum=-2.572;QD=36.07;ReadPosRankSum=0.752;VQSLOD=5.1148;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,117,1855	1/1:0,5:5:12.04:167,12,0	0/0:18,0:17:51.11:0,51,727	0/0:24,0:24:69.18:0,69,988	0/0:27,0:26:72.25:0,72,1148	0/0:18,0:16:42.14:0,42,658	0/0:16,0:16:42.14:0,42,659	1/1:0,21:21:60.20:836,60,0	0/0:17,0:17:45.15:0,45,713	1/1:0,26:26:75.25:1046,75,0	1/1:0,11:11:27.09:373,27,0	1/1:0,21:21:57.19:794,57,0	1/1:0,15:15:39.13:543,39,0	1/1:0,12:12:18.06:248,18,0	1/1:0,16:16:39.13:544,39,0	1/1:0,11:11:24.08:334,24,0	1/1:0,34:34:90.30:1251,90,0	1/1:0,17:17:42.14:587,42,0	0/0:14,0:14:39.12:0,39,581	0/0:23,0:23:69.24:0,69,1093	0/0:32,0:32:93.32:0,93,1479	1/1:0,14:14:36.12:503,36,0	1/1:0,16:16:39.13:545,39,0	1/1:0,14:14:39.13:545,39,0	1/1:0,22:22:63.21:881,63,0	0/0:23,1:23:21.25:0,21,903	0/0:28,0:25:72.25:0,72,1149	0/0:16,0:16:48.16:0,48,764
chr10	44024095	.	A	AC	6107.02	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=16.868;DP=565;FS=14.314;HRun=2;HaplotypeScore=161.4046;InbreedingCoeff=0.9697;MQ=83.39;MQ0=0;MQRankSum=-8.648;QD=22.62;ReadPosRankSum=3.764;VQSLOD=3.2859;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,117,1434	1/1:4,0:4:6.01:60,6,0	0/0:15,0:14:38.79:0,39,458	0/0:27,0:27:75.21:0,75,908	0/0:13,0:13:30.09:0,30,372	0/0:23,0:23:57.18:0,57,706	0/0:33,0:33:96.28:0,96,1174	1/1:23,0:23:65.53:485,66,0	0/0:21,0:21:57.18:0,57,707	1/1:17,0:18:44.75:381,45,0	1/1:10,1:11:14.82:117,15,0	1/1:27,0:27:75.10:750,75,0	1/1:22,3:25:69.04:677,69,0	1/1:24,1:25:68.98:630,69,0	1/1:19,2:21:57.01:544,57,0	1/1:20,0:20:51:467,51,0	1/1:28,0:28:74.98:671,75,0	1/1:13,0:13:39.01:354,39,0	0/0:17,0:17:48.13:0,48,582	0/0:7,0:7:18.06:0,18,223	0/0:61,0:61:99:0,172,2093	1/1:10,1:11:14.99:142,15,0	1/1:8,0:8:15.01:152,15,0	1/1:22,0:22:44.92:396,45,0	1/1:12,2:14:29.98:281,30,0	0/0:16,0:16:39.08:0,39,464	0/0:16,0:16:45.14:0,45,558	0/0:4,0:4:9.03:0,9,111
chr10	44024096	.	C	CA	10508.48	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=12.825;DP=565;FS=12.203;HRun=1;HaplotypeScore=143.4949;InbreedingCoeff=0.9748;MQ=84.31;MQ0=0;MQRankSum=-8.077;QD=39.65;ReadPosRankSum=4.766;VQSLOD=2.7317;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,123,1682	1/1:2,3:5:5.84:95,6,0	0/0:16,0:15:42.14:0,42,577	0/0:27,0:27:75.25:0,75,1043	0/0:14,0:14:33.10:0,33,444	0/0:22,0:22:60.19:0,60,814	0/0:34,0:34:96.32:0,96,1340	1/1:2,22:24:66.09:1053,66,0	0/0:21,0:21:57.19:0,57,797	1/1:2,14:16:45.12:684,45,0	1/1:3,7:10:18.05:264,18,0	1/1:2,26:28:75.15:1187,75,0	1/1:4,21:25:69.13:1083,69,0	1/1:2,23:25:69.23:1095,69,0	1/1:4,15:19:54.17:852,54,0	1/1:1,17:18:51.09:811,51,0	1/1:1,26:27:72.23:1147,72,0	1/1:1,12:13:36.02:573,36,0	0/0:20,0:20:57.15:0,57,758	0/0:7,0:7:21.06:0,21,278	0/0:60,0:60:99:0,178,2434	1/1:4,7:11:15.05:234,15,0	1/1:1,7:8:15.03:226,15,0	1/1:3,19:22:48.07:737,48,0	1/1:3,11:14:29.97:466,30,0	0/0:16,0:16:48.13:0,48,616	0/0:16,0:16:45.15:0,45,629	0/0:4,0:4:12.02:0,12,149
chr10	44024097	.	CA	C	3822.64	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=18.249;DP=565;FS=11.782;HRun=1;HaplotypeScore=163.5577;InbreedingCoeff=0.9813;MQ=83.67;MQ0=0;MQRankSum=-8.638;QD=14.26;ReadPosRankSum=3.259;VQSLOD=2.2586;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,126,1949	1/1:5,0:5:14.38:92,14,0	0/0:15,0:14:42.13:0,42,640	0/0:27,0:27:75.23:0,75,1156	0/0:12,0:12:33.10:0,33,503	0/0:22,0:22:63.18:0,63,956	0/0:34,0:34:99:0,99,1553	1/1:23,1:24:70.80:482,71,0	0/0:22,0:22:63.16:0,63,953	1/1:15,1:16:42.79:263,43,0	1/1:9,1:10:14.62:95,15,0	1/1:28,0:28:73.64:376,74,0	1/1:26,0:26:68.79:359,69,0	1/1:25,1:26:70.19:384,70,0	1/1:18,1:19:51.92:260,52,0	1/1:18,0:18:50.92:274,51,0	1/1:26,1:27:71.65:390,72,0	1/1:15,0:15:42.87:247,43,0	0/0:20,0:20:60.14:0,60,844	0/0:7,0:7:21.07:0,21,333	0/0:59,0:59:99:0,172,2726	1/1:11,0:11:13.92:72,14,0	1/1:8,0:8:14.78:81,15,0	1/1:20,1:21:45.79:261,46,0	1/1:14,0:14:30.94:183,31,0	0/0:16,0:16:48.12:0,48,735	0/0:16,0:16:45.15:0,45,719	0/0:4,0:4:9.03:0,9,142
chr10	44024145	.	GT	G	9994.54	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=15.303;DP=559;FS=2.784;HRun=1;HaplotypeScore=141.0048;InbreedingCoeff=0.9753;MQ=89.82;MQ0=0;MQRankSum=-7.091;QD=35.32;ReadPosRankSum=2.466;VQSLOD=4.5919;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,111,1594	1/1:0,8:8:24.08:335,24,0	0/0:24,0:24:66.07:0,66,948	0/0:25,0:25:70.42:0,70,948	0/0:8,0:8:24.08:0,24,352	0/0:19,0:19:54.17:0,54,785	0/0:31,0:31:90.26:0,90,1282	1/1:7,14:21:59.98:732,60,0	0/0:20,0:20:60.18:0,60,857	1/1:0,20:20:57.13:745,57,0	1/1:3,15:18:45.12:586,45,0	1/1:0,26:26:68.98:937,69,0	1/1:0,20:20:54.14:729,54,0	1/1:1,23:24:63.19:858,63,0	1/1:0,17:17:42.14:584,42,0	1/1:1,10:11:33.10:442,33,0	1/1:0,24:24:54.18:752,54,0	1/1:0,17:17:51.17:704,51,0	0/0:21,0:21:63.18:0,63,875	0/0:14,0:14:42.13:0,42,608	0/0:42,0:42:99:0,120,1743	1/1:1,21:22:51.17:712,51,0	1/1:0,11:11:27.09:375,27,0	1/1:1,28:29:69.19:922,69,0	1/1:0,15:15:42.14:584,42,0	0/0:19,0:19:57.18:0,57,835	0/0:14,0:14:36.12:0,36,524	0/0:1,0:1:2.99:0,3,23
chr10	44024788	.	AC	A	6383.43	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=15.880;DP=449;FS=1.336;HRun=6;HaplotypeScore=118.0330;InbreedingCoeff=0.9943;MQ=68.32;MQ0=0;MQRankSum=-7.381;QD=27.16;ReadPosRankSum=1.005;VQSLOD=3.9767;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:57.16:0,57,711	1/1:0,9:9:27:275,27,0	0/0:21,0:19:49.47:0,49,588	0/0:15,0:14:18.83:0,19,256	0/0:24,0:24:69.18:0,69,853	0/0:18,0:18:51.13:0,51,632	0/0:11,0:11:33.11:0,33,429	1/1:4,30:34:90.09:914,90,0	0/0:6,0:6:18.06:0,18,233	1/1:2,12:14:35.96:367,36,0	1/1:1,16:17:50.94:514,51,0	1/1:2,13:15:39.01:391,39,0	1/1:1,16:17:50.94:494,51,0	1/1:1,6:7:17.89:164,18,0	1/1:0,25:25:71.90:713,72,0	1/1:0,7:7:21.02:213,21,0	1/1:3,24:27:66.11:692,66,0	1/1:0,14:14:42.03:425,42,0	0/0:15,0:15:39.10:0,39,471	0/0:17,0:17:48.13:0,48,594	0/0:13,0:13:36.10:0,36,453	1/1:2,10:12:26.92:259,27,0	1/1:1,12:13:38.93:388,39,0	1/1:3,8:11:26.96:264,27,0	1/1:4,9:13:32.85:309,33,0	0/0:13,0:13:17:0,17,361	0/0:27,0:27:78.25:0,78,1011	0/0:15,0:15:45.15:0,45,584
chr10	44024789	.	C	CA	3123.78	PASS	AB=0.935;AC=30;AF=0.536;AN=56;BaseQRankSum=15.359;DP=463;FS=1.826;HRun=6;HaplotypeScore=131.9392;InbreedingCoeff=0.8451;MQ=68.69;MQ0=0;MQRankSum=-5.334;QD=12.11;ReadPosRankSum=2.826;VQSLOD=1.7189;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:57.19:0,57,792	1/1:9,0:9:26.36:171,26,0	0/0:22,0:20:52.14:0,52,664	0/0:15,0:14:5.05:0,5,279	0/0:24,0:24:72.23:0,72,986	0/0:18,0:18:54.17:0,54,733	0/0:11,0:11:33.11:0,33,461	1/1:36,0:36:38.95:396,39,0	0/0:6,0:6:18.06:0,18,251	1/1:14,1:15:20.74:214,21,0	1/1:18,0:18:48.52:298,49,0	1/1:15,0:15:20.66:177,21,0	1/1:16,1:17:39.67:244,40,0	1/1:9,0:9:7.44:140,7,0	1/1:26,0:26:68.43:434,68,0	1/1:7,0:7:17.12:101,17,0	1/1:26,1:27:33.37:287,33,0	1/1:14,0:14:33.91:184,34,0	0/0:16,0:16:45.13:0,45,594	0/0:17,0:17:48.16:0,48,668	0/0:14,0:14:39.10:0,39,510	1/1:12,0:12:10.87:153,11,0	1/1:12,1:13:37.20:240,37,0	1/1:11,0:11:10.40:118,10,0	0/1:15,1:16:4.98:181,0,5	0/1:12,1:13:5.85:6,0,447	0/0:27,0:27:78.26:0,78,1087	0/0:15,0:15:45.15:0,45,628
chr10	44024869	.	G	GGA	10161.20	PASS	AB=0.929;AC=31;AF=0.554;AN=56;BaseQRankSum=6.711;DP=367;FS=4.464;HRun=0;HaplotypeScore=82.9657;InbreedingCoeff=0.9116;MQ=74.89;MQ0=0;MQRankSum=-5.487;QD=50.30;ReadPosRankSum=1.757;VQSLOD=5.5497;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:48.13:0,48,755	1/1:0,4:4:9.03:182,9,0	0/0:10,0:9:24.07:0,24,360	0/0:10,0:10:19.31:0,19,207	0/0:20,0:20:60.18:0,60,931	0/0:21,0:21:63.22:0,63,1027	0/0:7,0:7:21.06:0,21,319	1/1:7,27:35:93.26:1808,93,0	0/0:6,0:6:18.05:0,18,270	1/1:2,9:11:33.11:665,33,0	1/1:1,11:12:27.09:548,27,0	1/1:1,8:9:27.09:541,27,0	1/1:3,9:12:27.09:540,27,0	1/1:0,12:13:33.11:655,33,0	1/1:1,10:11:30.10:602,30,0	1/1:0,7:8:21.07:427,21,0	1/1:1,13:14:39.13:788,39,0	1/1:0,14:14:39.13:792,39,0	0/0:16,0:16:48.16:0,48,783	0/0:14,0:14:42.13:0,42,656	0/0:11,0:11:33.11:0,33,538	1/1:0,8:8:24.08:487,24,0	1/1:0,10:10:27.09:548,27,0	1/1:0,5:5:12.04:244,12,0	1/1:3,20:23:66.23:1313,66,0	0/1:12,1:13:21.86:22,0,523	0/0:17,0:17:51.17:0,51,828	0/0:16,0:16:48.16:0,48,782
chr10	44026005	.	A	AG	11137.91	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=6.561;DP=480;FS=47.163;HRun=3;HaplotypeScore=100.4813;InbreedingCoeff=0.9747;MQ=92.20;MQ0=0;MQRankSum=-10.089;QD=31.55;ReadPosRankSum=-0.093;VQSLOD=1.2676;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,16:23:47.37:627,47,0	1/1:1,8:9:27.09:377,27,0	0/0:26,0:26:69.15:0,69,779	0/0:23,0:23:45.19:0,45,609	1/1:3,9:12:12.04:157,12,0	0/0:20,0:20:54.13:0,54,622	0/0:33,0:33:99:0,99,1162	1/1:3,22:25:63.21:882,63,0	0/0:25,0:25:66.20:0,66,791	1/1:3,14:17:31.03:573,31,0	1/1:2,11:13:26.26:310,26,0	1/1:3,10:13:30.10:413,30,0	1/1:3,19:22:57.19:789,57,0	1/1:1,14:15:33.11:461,33,0	1/1:0,7:7:21.07:294,21,0	1/1:1,4:5:9.03:126,9,0	1/1:3,20:23:56.49:786,56,0	1/1:2,11:13:33.11:460,33,0	1/1:3,18:21:50.73:651,51,0	1/1:2,11:13:29.96:398,30,0	1/1:1,19:20:47.76:635,48,0	1/1:0,9:9:21.07:293,21,0	1/1:0,11:11:30.10:419,30,0	1/1:1,20:21:33.09:446,33,0	1/1:4,19:23:54.65:741,55,0	1/1:1,13:14:39.13:544,39,0	1/1:5,13:18:30.95:511,31,0	1/1:0,6:6:18.06:246,18,0
chr10	44026021	.	T	TTCCCCC	9236.27	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=10.472;DP=465;FS=21.235;HRun=0;HaplotypeScore=156.0659;InbreedingCoeff=0.9772;MQ=83.69;MQ0=0;MQRankSum=-13.102;QD=26.77;ReadPosRankSum=-6.229;VQSLOD=2.0289;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:24:53.57:420,54,0	1/1:8,1:9:26.93:354,27,0	0/0:18,0:18:51.10:0,51,994	0/0:22,0:22:50.43:0,50,780	1/1:14,0:15:11.07:204,11,0	0/0:22,0:22:63.19:0,63,1536	0/0:38,0:38:99:0,114,2444	1/1:11,0:11:17.96:183,18,0	0/0:20,0:20:57.13:0,57,1333	1/1:11,0:11:28.34:244,28,0	1/1:12,1:14:17.80:186,18,0	1/1:14,0:14:35.50:455,36,0	1/1:25,0:26:65.40:877,65,0	1/1:18,0:18:38.82:545,39,0	1/1:7,0:7:20.77:144,21,0	1/1:6,0:6:14.90:174,15,0	1/1:21,3:27:70.91:1124,71,0	1/1:13,0:14:39:906,39,0	1/1:17,0:17:38.82:435,39,0	1/1:13,0:13:29.41:352,29,0	1/1:18,0:18:27.72:246,28,0	1/1:11,0:11:19.39:227,19,0	1/1:12,0:12:17.35:143,17,0	1/1:19,0:20:40.49:661,40,0	1/1:20,0:20:50.34:495,50,0	1/1:14,0:14:29.80:254,30,0	1/1:16,0:16:39.11:376,39,0	1/1:7,0:7:20.94:231,21,0
chr10	44026788	.	C	CCCTGTAGCTCTGT	54383.30	PASS	AB=1.000;AC=47;AF=0.839;AN=56;BaseQRankSum=-3.522;DP=589;FS=0.000;HRun=0;HaplotypeScore=167.8174;InbreedingCoeff=0.8395;MQ=63.14;MQ0=0;MQRankSum=-13.323;QD=107.48;ReadPosRankSum=2.208;VQSLOD=4.4891;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,16:34:57.20:3743,57,0	1/1:4,2:11:8.82:591,9,0	0/1:13,0:13:10.38:10,0,779	0/0:13,0:13:30.99:0,31,1001	1/1:5,10:27:33.11:2031,33,0	0/0:18,0:18:51.16:0,51,1854	0/0:26,0:26:78.22:0,78,2557	1/1:4,1:20:54.17:2582,54,0	0/0:26,0:26:66.20:0,66,2272	1/1:6,16:27:75.26:4416,75,0	1/1:6,9:19:39.13:2437,39,0	1/1:4,14:23:48.16:3056,48,0	1/1:4,8:19:30.10:1787,30,0	1/1:5,12:24:51.14:3281,51,0	1/1:8,14:31:51.17:3349,51,0	1/1:4,10:20:39.13:2561,39,0	1/1:10,12:33:57.20:3419,57,0	1/1:4,7:16:30.10:1928,30,0	1/1:6,5:23:57.06:2115,57,0	1/1:0,11:16:33.11:2125,33,0	1/1:8,2:22:21.07:1245,21,0	1/1:1,7:12:21.07:1378,21,0	1/1:3,7:15:24.08:1574,24,0	1/1:6,9:25:39.13:2367,39,0	1/1:6,6:22:27.09:1673,27,0	1/1:7,13:28:75.19:3882,75,0	1/1:5,8:18:40.38:2437,40,0	1/1:1,2:7:6.02:395,6,0
chr10	44026997	.	GAAA	G	5084	PASS	AB=0.565;AC=25;AF=0.446;AN=56;BaseQRankSum=-2.852;DP=555;FS=17.385;HRun=13;HaplotypeScore=136.8322;InbreedingCoeff=0.7841;MQ=69.16;MQ0=3;MQRankSum=2.992;QD=18.62;ReadPosRankSum=8.377;VQSLOD=1.2947;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:42.08:0,42,530	1/1:2,6:8:15.01:182,15,0	0/0:27,0:19:29.82:0,30,325	0/0:16,0:12:10.52:0,11,209	0/0:26,0:26:55.26:0,55,643	0/0:14,0:16:42.14:0,42,776	0/0:15,0:17:45.14:0,45,782	0/1:7,0:30:6.39:6,0,44	0/0:20,0:21:63.14:0,63,1077	0/1:7,2:21:48.51:49,0,56	0/0:3,0:15:18.45:0,18,77	1/1:2,14:17:37.46:471,37,0	1/1:3,10:13:17.99:219,18,0	1/1:5,11:16:35.93:418,36,0	1/1:4,14:18:36.05:435,36,0	1/1:2,14:16:36.05:438,36,0	1/1:1,19:21:57.09:674,57,0	1/1:6,15:21:39.09:474,39,0	0/0:26,0:25:63.19:0,63,898	0/0:19,0:19:57.12:0,57,768	0/0:17,0:17:15.52:0,16,210	1/1:6,13:20:42.01:492,42,0	1/1:3,18:22:51.03:602,51,0	1/1:7,24:32:43.40:544,43,0	0/1:2,3:18:36.15:81,0,36	0/0:17,0:19:47.61:0,48,601	0/0:20,0:19:47.55:0,48,594	0/0:18,0:18:30.10:0,30,441
chr10	44029394	.	G	GT	6450.86	PASS	AB=1.000;AC=37;AF=0.661;AN=56;BaseQRankSum=10.639;DP=550;FS=1.229;HRun=1;HaplotypeScore=88.2383;InbreedingCoeff=0.4262;MQ=81.66;MQ0=0;MQRankSum=-6.786;QD=15.40;ReadPosRankSum=3.833;VQSLOD=4.9543;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:22:66.43:66,0,96	1/1:8,0:8:8.87:74,9,0	0/0:28,0:26:50.08:0,50,651	0/0:25,1:27:40.43:0,40,573	0/1:12,0:12:26.87:27,0,52	0/0:18,0:18:51.12:0,51,627	0/0:23,0:23:63.12:0,63,755	1/1:14,1:15:42.04:437,42,0	0/0:25,0:25:72.20:0,72,888	1/1:9,1:10:26.86:222,27,0	1/1:11,0:11:20.57:157,21,0	1/1:18,4:22:33.05:364,33,0	1/1:19,0:19:20.96:181,21,0	1/1:17,1:18:27:253,27,0	1/1:0,26:26:60.20:889,60,0	1/1:0,27:27:75.25:1115,75,0	1/1:14,3:17:30.04:322,30,0	1/1:0,22:22:48.16:716,48,0	0/1:12,0:12:30.26:42,0,30	0/1:21,0:21:85.63:86,0,122	0/1:31,0:31:70.94:71,0,133	1/1:16,1:16:21.02:206,21,0	1/1:14,1:14:9.48:99,9,0	1/1:27,4:31:41.62:427,42,0	1/1:24,3:27:56.96:549,57,0	0/1:17,0:17:89.89:90,0,119	0/1:19,0:19:58.53:59,0,73	0/0:10,0:10:24.06:0,24,292
chr10	44029395	.	T	TTG	6827.39	PASS	AB=0.577;AC=31;AF=0.554;AN=56;BaseQRankSum=6.448;DP=612;FS=11.597;HRun=0;HaplotypeScore=119.1794;InbreedingCoeff=0.9123;MQ=78.86;MQ0=0;MQRankSum=-5.461;QD=19.45;ReadPosRankSum=2.808;VQSLOD=4.9556;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:24:33.55:0,34,198	1/1:2,7:11:11.97:163,12,0	0/0:27,0:26:61.98:0,62,829	0/0:25,0:26:58.91:0,59,734	0/0:5,0:12:20.33:0,20,108	0/0:18,0:19:51.14:0,51,779	0/0:20,0:22:63.17:0,63,927	1/1:3,13:20:50.95:641,51,0	0/0:28,0:28:72.17:0,72,1088	1/1:4,8:14:32.91:359,33,0	1/1:3,9:13:21:353,21,0	1/1:8,15:28:32.85:492,33,0	1/1:4,17:24:27.02:459,27,0	1/1:4,18:24:27.02:490,27,0	1/1:26,0:26:58.97:369,59,0	1/1:27,0:27:73.77:466,74,0	1/1:8,13:27:32.95:535,33,0	1/1:22,0:22:47.29:301,47,0	0/1:4,0:15:0.18:0,0,85	0/0:8,0:21:36.90:0,37,256	0/0:11,0:33:51.76:0,52,286	1/1:4,17:22:21:379,21,0	1/1:4,11:16:8.96:139,9,0	1/1:10,23:34:42.65:715,43,0	1/1:3,23:26:56.99:965,57,0	0/0:9,0:20:0.05:0,0,174	0/0:10,0:20:35.38:0,35,192	0/0:8,0:8:24.06:0,24,357
chr10	44029601	.	CCCCTGCACTCCATCAT	C	616.45	PASS	AB=1.000;AC=18;AF=0.346;AN=52;BaseQRankSum=7.378;DP=967;FS=2.668;HRun=0;HaplotypeScore=246.5453;InbreedingCoeff=-0.0305;MQ=28.24;MQ0=225;MQRankSum=-6.303;QD=1.01;ReadPosRankSum=1.758;VQSLOD=2.6785;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:8:2.80:0,3,7	1/1:34,0:17:4.52:30,5,0	./.	0/0:33,0:4:11.70:0,12,174	0/1:8,0:6:0:0,0,0	0/0:28,0:28:75.24:0,75,2142	0/0:39,0:38:76.47:0,76,1934	0/0:49,0:25:35.53:0,36,490	0/0:38,0:38:96.24:0,96,2591	0/1:71,0:27:77.76:78,0,342	0/1:25,0:15:10.29:10,0,59	0/1:61,0:28:52.99:53,0,59	0/1:50,0:19:15.55:91,0,16	0/1:50,0:32:99:100,0,125	0/1:45,0:25:50.55:51,0,63	1/1:32,0:19:13.94:68,14,0	1/1:40,0:27:3.97:64,4,0	0/1:33,0:23:20.07:58,0,20	./.	0/0:20,0:15:2.88:0,3,34	0/1:48,0:20:0:0,0,2	0/0:29,21:30:7:0,7,75	0/1:32,0:16:38.91:39,0,89	0/1:57,0:28:60.16:60,0,79	0/0:36,0:24:15.80:0,16,159	0/1:22,0:15:40.67:65,0,41	0/0:11,0:7:11.89:0,12,95	0/0:9,0:9:7.81:0,8,56
chr10	44029931	.	CCAGCATCCCTGCACTT	C	619.55	PASS	AB=0.938;AC=17;AF=0.447;AN=38;BaseQRankSum=8.536;DP=452;FS=3.465;HRun=0;HaplotypeScore=115.5614;InbreedingCoeff=0.1960;MQ=52.41;MQ0=100;MQRankSum=-3.863;QD=2.90;ReadPosRankSum=-1.461;VQSLOD=2.2354;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:8,0:4:4.76:0,5,22	0/1:26,0:8:11.20:11,0,138	0/1:22,0:11:61.13:61,0,143	./.	0/0:24,0:24:58.08:0,58,1066	0/0:60,0:58:99:0,159,2914	./.	0/0:35,0:35:94.26:0,94,1805	1/1:8,24:25:59.20:541,59,0	0/1:4,14:14:0:0,0,0	1/1:28,0:10:5.92:39,6,0	1/1:13,0:1:2.80:13,3,0	0/1:20,0:8:8.24:11,0,8	1/1:15,0:6:2.60:10,3,0	0/1:16,0:9:8.66:17,0,9	./.	0/0:16,0:7:0:0,0,0	./.	./.	0/0:19,0:7:0.25:0,0,1	./.	0/1:9,0:6:0:0,0,0	./.	0/1:14,0:9:12.04:12,0,12	0/0:6,0:1:2.94:0,3,18	1/1:1,0:1:2.99:24,3,0	./.
chr10	44030065	.	TCCCCGCACTCCATCATCCCCGCACTCCAGCAC	T	462.65	PASS	AB=1.000;AC=23;AF=0.548;AN=42;BaseQRankSum=5.307;DP=486;FS=11.062;HRun=0;HaplotypeScore=165.7973;InbreedingCoeff=0.4564;MQ=30.23;MQ0=142;MQRankSum=-7.760;QD=2.35;ReadPosRankSum=-1.004;VQSLOD=2.2633;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:15,0:11:9.03:9,0,71	./.	./.	./.	./.	0/0:21,0:19:39.95:0,40,677	0/0:54,0:46:62.72:0,63,1451	./.	0/0:41,0:39:99:0,110,2306	1/1:14,0:5:10.01:57,10,0	1/1:6,0:1:0.89:2,1,0	1/1:20,0:12:14.93:112,15,0	1/1:19,0:8:14.84:113,15,0	1/1:22,0:7:5.94:42,6,0	1/1:14,0:8:6.33:36,6,0	1/1:16,0:12:9.31:57,9,0	0/1:9,0:3:27.21:33,0,27	1/1:10,0:5:5.70:42,6,0	0/0:5,0:2:3.01:0,3,43	0/0:1,0:1:3:0,3,29	0/0:58,0:33:25.39:0,25,609	1/1:8,13:13:1.82:5,2,0	0/0:4,0:1:0:0,0,0	1/1:27,0:17:2.56:92,3,0	./.	0/0:16,0:7:17.94:0,18,218	0/1:4,0:4:11.20:11,0,15	./.
chr10	44030298	.	TCCATCATCCCTGCACC	T	593.21	PASS	AB=1.000;AC=23;AF=0.479;AN=48;BaseQRankSum=6.789;DP=541;FS=18.059;HRun=0;HaplotypeScore=105.4920;InbreedingCoeff=-0.0646;MQ=32.67;MQ0=152;MQRankSum=-2.380;QD=1.87;ReadPosRankSum=-1.596;VQSLOD=0.6696;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,0:3:5.91:38,6,0	./.	0/0:26,0:1:2.84:0,3,14	./.	1/1:3,0:1:3:25,3,0	0/0:23,0:21:41.60:0,42,1015	0/0:49,0:49:69.42:0,69,1250	0/0:12,0:3:8.98:0,9,72	0/0:34,0:33:78.11:0,78,2073	0/1:27,0:10:16.59:99,0,17	0/0:8,12:13:5.94:0,6,45	0/1:30,0:17:31.68:43,0,32	0/1:23,0:11:1.72:2,0,46	0/1:27,0:17:6.60:7,0,77	0/1:15,0:11:26.15:27,0,26	0/1:21,0:13:20.83:47,0,21	0/1:24,0:10:8.68:45,0,9	0/1:19,0:13:35.73:83,0,36	./.	1/1:1,0:1:2.94:18,3,0	1/1:21,0:10:20.94:166,21,0	0/1:28,0:9:9.09:9,0,47	0/0:13,0:5:3:0,3,27	0/1:37,0:19:45:55,0,45	0/1:31,0:9:28.27:28,0,39	1/1:2,0:1:3:29,3,0	1/1:1,0:1:2.98:21,3,0	./.
chr10	44030629	.	TGCACTCCAGCATCCCTGCACTCCATCATCCCC	T	277.97	PASS	AB=1.000;AC=11;AF=0.220;AN=50;BaseQRankSum=1.636;DP=1496;FS=3.656;HRun=0;HaplotypeScore=342.6972;InbreedingCoeff=0.2093;MQ=23.85;MQ0=517;MQRankSum=-4.965;QD=0.61;ReadPosRankSum=-0.388;VQSLOD=1.7611;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:10:12.25:19,0,12	0/0:38,0:14:2.94:0,3,18	0/0:26,0:1:3.01:0,3,44	0/0:40,0:3:8.52:0,9,91	./.	0/0:23,0:22:53.81:0,54,1130	0/0:36,0:34:78.07:0,78,1247	./.	0/0:49,0:49:99:0,112,2343	0/1:107,0:51:99:109,0,451	0/1:39,0:14:0:1,0,0	0/0:103,0:48:42.20:0,42,305	0/1:86,0:37:41.45:41,0,240	0/0:100,0:51:59.86:0,60,542	0/0:73,0:34:20.43:0,20,200	0/0:85,0:36:37.67:0,38,295	0/0:77,0:35:25.65:0,26,176	0/1:90,0:41:4.07:4,0,143	1/1:5,5:3:8.96:71,9,0	0/1:12,0:6:7.57:8,0,18	0/1:66,0:27:8.04:24,0,8	0/0:52,0:14:8.23:0,8,40	0/0:45,0:20:1.01:0,1,48	0/0:146,0:56:25.09:0,25,200	0/0:61,0:23:13.07:0,13,88	1/1:12,9:9:13.68:137,14,0	./.	0/0:5,0:5:0.47:0,0,1
chr10	44030704	.	ATCCCTGCACTCCATCG	A	632.34	PASS	AB=1.000;AC=30;AF=0.682;AN=44;BaseQRankSum=8.454;DP=664;FS=41.480;HRun=0;HaplotypeScore=130.7677;InbreedingCoeff=0.3926;MQ=47.24;MQ0=196;MQRankSum=-5.899;QD=1.37;ReadPosRankSum=0.086;VQSLOD=0.8351;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:2:2.94:18,3,0	1/1:4,0:2:2.88:15,3,0	0/1:53,0:11:18.80:19,0,251	0/0:32,0:11:10.72:0,11,167	./.	0/0:18,0:17:33.09:0,33,935	0/0:49,0:49:96.20:0,96,2317	0/1:24,0:1:0:0,0,0	0/0:44,0:44:99:0,99,2998	1/1:33,0:12:15.82:127,16,0	./.	1/1:38,0:16:15.70:120,16,0	0/1:35,0:19:12.37:31,0,12	1/1:36,0:13:12.28:80,12,0	1/1:27,0:16:15.73:143,16,0	0/1:33,0:13:18.13:21,0,18	1/1:34,0:20:7.26:75,7,0	1/1:30,0:12:4.84:45,5,0	1/1:2,0:2:0.47:1,0,0	./.	0/1:26,0:14:0:0,0,0	./.	0/1:18,0:8:0:0,0,0	1/1:46,0:11:5.81:42,6,0	1/1:15,0:5:0.47:1,0,0	1/1:5,0:1:3.01:31,3,0	./.	./.
chr10	44030837	.	TGCACTCCAGCATCCCC	T	4902.94	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=7.131;DP=819;FS=29.657;HRun=0;HaplotypeScore=331.5412;InbreedingCoeff=0.2879;MQ=50.92;MQ0=76;MQRankSum=1.595;QD=9.13;ReadPosRankSum=2.244;VQSLOD=2.1925;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:33,0:30:67.41:1161,67,0	1/1:11,0:7:6.73:37,7,0	0/0:24,0:15:39.96:0,40,583	0/0:26,0:16:32.21:0,32,630	1/1:4,12:15:12.04:144,12,0	0/0:20,0:20:54.18:0,54,1317	0/0:30,0:30:69.16:0,69,1259	0/0:35,0:11:2.58:0,3,23	0/0:31,0:31:78.26:0,78,1722	0/1:54,0:43:60.11:64,0,60	0/1:26,0:21:10.43:10,0,38	0/1:49,0:43:14.03:14,0,89	0/0:32,0:27:20.25:0,20,156	0/1:35,0:32:12.42:12,0,87	0/1:37,0:30:12.47:12,0,84	0/1:30,0:22:41.37:41,0,95	0/1:41,0:35:0.56:1,0,214	0/1:34,0:32:26.14:26,0,148	1/1:10,0:8:15:278,15,0	0/1:8,0:7:13.96:87,0,14	1/1:54,0:46:83.36:1200,83,0	0/0:28,0:24:2.65:0,3,64	1/1:22,0:17:2.75:23,3,0	0/0:56,0:46:11.29:0,11,105	1/1:27,0:16:3.76:11,4,0	1/1:8,20:25:33.16:882,33,0	1/1:15,0:14:34.36:654,34,0	1/1:7,0:7:15.05:245,15,0
chr10	44031512	.	TG	T	10696.30	PASS	AB=0.844;AC=54;AF=0.964;AN=56;BaseQRankSum=-3.770;DP=416;FS=14.135;HRun=2;HaplotypeScore=90.0658;InbreedingCoeff=-0.0516;MQ=63.46;MQ0=4;MQRankSum=-3.100;QD=25.71;ReadPosRankSum=2.154;VQSLOD=3.4771;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,16:16:24.08:311,24,0	1/1:0,10:10:24.08:311,24,0	0/1:23,3:10:99:99,0,99	0/1:14,5:10:55.82:170,0,56	1/1:0,5:5:9.02:117,9,0	1/1:1,21:22:50.78:661,51,0	1/1:0,24:24:56.80:738,57,0	1/1:1,21:22:57.16:739,57,0	1/1:0,20:20:42.11:545,42,0	1/1:1,17:18:51.13:644,51,0	1/1:0,9:9:9.03:117,9,0	1/1:3,17:20:39.13:506,39,0	1/1:1,12:13:33.10:428,33,0	1/1:0,18:18:39.13:506,39,0	1/1:0,7:7:15.05:194,15,0	1/1:0,15:15:39.13:501,39,0	1/1:0,20:20:45.15:583,45,0	1/1:0,12:12:27.09:351,27,0	1/1:2,10:12:30.09:373,30,0	1/1:2,8:10:12.04:155,12,0	1/1:0,11:11:27.09:350,27,0	1/1:0,14:14:24.07:312,24,0	1/1:0,10:10:2.63:39,3,0	1/1:0,13:13:21.02:272,21,0	1/1:1,18:19:36.12:467,36,0	1/1:0,15:15:45.15:584,45,0	1/1:0,12:12:36.12:467,36,0	1/1:0,4:4:12.04:156,12,0
chr10	44031955	.	TCATTTTG	T	4880.78	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-1.760;DP=305;FS=35.697;HRun=0;HaplotypeScore=102.6166;InbreedingCoeff=0.9224;MQ=64.77;MQ0=0;MQRankSum=-8.759;QD=51.38;ReadPosRankSum=0.312;VQSLOD=2.4976;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:33.06:0,33,1347	1/1:0,6:6:12.04:331,12,0	0/0:7,0:7:9.77:0,10,266	0/0:10,0:10:18.28:0,18,394	0/0:15,0:15:0.34:0,0,717	0/0:10,0:10:30.10:0,30,899	0/0:13,0:13:18.12:0,18,906	0/0:17,0:17:50.37:0,50,1275	0/0:12,0:11:33.11:0,33,1059	0/0:18,0:18:52.06:0,52,1436	0/0:18,0:18:51.13:0,51,1465	1/1:0,11:10:14.61:411,15,0	1/1:0,10:10:18.06:498,18,0	1/1:0,9:9:18.06:498,18,0	1/1:0,12:12:24.08:665,24,0	1/1:0,8:8:15.05:416,15,0	1/1:2,3:5:14.98:305,15,0	1/1:0,5:5:12.04:334,12,0	0/0:17,0:17:39.13:0,39,1042	0/0:13,0:13:14.98:0,15,831	0/0:8,0:8:24.01:0,24,541	1/1:2,9:11:30.10:516,30,0	1/1:1,9:10:30.01:626,30,0	1/1:5,3:8:14.90:281,15,0	0/0:9,0:9:27.09:0,27,765	0/0:13,0:13:39.11:0,39,916	0/0:7,0:7:21.06:0,21,510	0/0:3,0:3:9.03:0,9,246
chr10	44032038	.	AACACACACAC	A	569.94	PASS	AB=0.875;AC=11;AF=0.229;AN=48;BaseQRankSum=2.628;DP=485;FS=4.646;HRun=0;HaplotypeScore=160.4686;InbreedingCoeff=0.5246;MQ=67.92;MQ0=17;MQRankSum=-3.289;QD=6.71;ReadPosRankSum=0.582;VQSLOD=2.6442;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:20:5.58:73,6,0	0/0:7,0:7:6.02:0,6,206	./.	./.	0/0:7,1:8:0:0,0,0	0/0:15,0:18:8.96:0,9,125	0/0:18,0:17:6.02:0,6,123	0/0:31,0:29:6.49:0,6,83	0/0:10,0:11:11.49:0,11,76	./.	./.	0/0:20,0:18:24.07:0,24,629	0/0:14,0:13:18.06:0,18,703	0/0:16,0:17:24.08:0,24,872	0/0:15,0:15:15.04:0,15,470	0/0:14,0:14:12.04:0,12,409	0/0:19,0:19:33.09:0,33,1131	0/0:16,0:13:12.04:0,12,286	1/1:13,0:12:8.99:98,9,0	1/1:9,1:10:3.82:21,4,0	0/0:25,0:23:4.18:0,4,36	0/0:19,0:20:6.02:0,6,161	0/0:12,0:10:6.02:0,6,194	0/0:26,0:26:13.45:0,13,729	0/0:13,0:14:5.88:0,6,36	0/1:12,2:13:42.33:215,0,42	1/1:14,2:16:4.24:249,4,0	1/1:10,0:8:2.98:50,3,0
chr10	44032076	.	C	CAT	1059.27	PASS	AB=0.990;AC=12;AF=0.222;AN=54;BaseQRankSum=-0.161;DP=527;FS=11.733;HRun=0;HaplotypeScore=146.3761;InbreedingCoeff=-0.0624;MQ=42.45;MQ0=40;MQRankSum=2.210;QD=5.00;ReadPosRankSum=0.896;VQSLOD=2.7061;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:26:16.79:0,17,120	0/1:6,0:6:6.23:35,0,6	./.	0/0:22,0:3:6.01:0,6,62	0/0:8,0:8:5.94:0,6,47	0/0:17,0:16:23.87:0,24,183	0/0:20,0:19:38.54:0,39,300	0/0:33,0:29:60.35:0,60,334	0/0:18,0:16:37.55:0,38,244	0/0:18,0:18:50.59:0,51,373	0/0:5,0:4:5.96:0,6,44	1/1:17,5:19:20.13:422,20,0	0/1:20,0:17:69.79:84,0,70	0/1:22,0:21:8.43:8,0,150	0/1:19,0:19:45.36:50,0,45	0/1:15,0:15:24.36:24,0,52	0/1:29,0:27:81.81:191,0,82	0/1:22,0:21:74.38:119,0,74	0/0:13,0:11:30.75:0,31,213	0/0:10,0:10:14.52:0,15,100	0/0:43,0:41:28.22:0,28,236	0/1:14,1:15:40.38:75,0,40	0/1:10,0:8:10.02:10,0,37	0/1:31,0:28:48.69:193,0,49	0/0:25,0:24:31.17:0,31,236	0/0:13,0:9:17.43:0,17,144	0/0:17,0:16:28.18:0,28,177	0/0:12,0:10:17.94:0,18,140
chr10	44032096	.	T	TAC	2544.94	PASS	AB=0.726;AC=14;AF=0.250;AN=56;BaseQRankSum=-2.020;DP=593;FS=4.004;HRun=0;HaplotypeScore=155.1733;InbreedingCoeff=0.8482;MQ=45.65;MQ0=34;MQRankSum=1.140;QD=16.21;ReadPosRankSum=0.677;VQSLOD=3.8112;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,23:30:1.40:506,1,0	0/0:3,0:4:10.58:0,11,115	0/0:23,0:11:31.86:0,32,340	0/0:36,0:14:24.02:0,24,256	0/1:5,3:8:0:0,0,0	0/0:17,0:16:30.05:0,30,355	0/0:27,0:25:44.99:0,45,558	0/0:34,0:32:72.05:0,72,869	0/0:22,0:20:48.04:0,48,545	0/0:21,0:21:59.58:0,60,652	0/0:5,0:5:12.04:0,12,149	0/0:30,0:27:47.15:0,47,652	0/0:22,0:20:35.58:0,36,400	0/0:21,0:20:30.27:0,30,413	0/0:21,0:21:39.08:0,39,456	0/0:10,0:10:27.08:0,27,335	0/0:31,0:30:61.38:0,61,744	0/0:22,0:21:41.92:0,42,468	1/1:8,10:16:30.54:414,31,0	1/1:6,4:10:15.05:244,15,0	1/1:15,33:47:37.62:638,38,0	0/0:15,0:15:26.99:0,27,286	0/0:8,0:8:15.02:0,15,170	0/0:35,0:33:66.19:0,66,814	0/0:30,0:29:54.17:0,54,667	0/1:12,6:16:0.34:421,0,0	1/1:5,9:13:24.80:350,25,0	1/1:2,3:3:9.03:147,9,0
chr10	44032386	.	CTTAA	C	21444.19	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=10.757;DP=631;FS=4.390;HRun=0;HaplotypeScore=149.6015;InbreedingCoeff=0.9980;MQ=67.24;MQ0=2;MQRankSum=-10.090;QD=41.08;ReadPosRankSum=4.771;VQSLOD=5.2447;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,38:41:99:1798,99,0	1/1:1,10:11:21.07:389,21,0	0/0:17,0:17:36.12:0,36,759	0/0:16,0:16:42.29:0,42,735	1/1:2,26:28:63.22:1173,63,0	0/0:31,0:31:93.19:0,93,2206	0/0:25,0:25:75.24:0,75,1944	1/1:1,29:30:87.18:1452,87,0	0/0:20,0:20:57.20:0,57,1519	1/1:4,15:19:45.12:770,45,0	1/1:3,21:24:42.06:742,42,0	1/1:1,26:27:72.25:1335,72,0	1/1:1,16:17:36.12:669,36,0	1/1:1,17:18:48.16:891,48,0	1/1:1,20:21:51.17:945,51,0	1/1:0,23:23:63.22:1172,63,0	1/1:5,11:15:33.11:614,33,0	1/1:2,14:16:30.10:559,30,0	1/1:7,24:31:69:1139,69,0	1/1:1,18:19:51.11:912,51,0	1/1:2,36:38:86.08:1504,86,0	1/1:1,21:22:36.12:669,36,0	1/1:3,11:14:24.08:445,24,0	1/1:3,19:22:38.49:645,38,0	1/1:1,20:21:44.81:681,45,0	1/1:2,24:26:72.14:1263,72,0	1/1:1,23:24:62.91:1173,63,0	1/1:2,11:13:27.09:503,27,0
chr10	44032554	.	A	ACT	11031.26	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-14.805;DP=740;FS=7.986;HRun=0;HaplotypeScore=92.6667;InbreedingCoeff=0.9999;MQ=72.70;MQ0=5;MQRankSum=-0.779;QD=40.41;ReadPosRankSum=1.349;VQSLOD=6.6488;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,44:46:99:1803,102,0	0/0:13,0:13:39.13:0,39,545	0/0:21,0:21:42.01:0,42,518	0/0:17,0:16:32.65:0,33,459	1/1:1,29:30:78.11:1275,78,0	0/0:30,0:30:90.27:0,90,1209	0/0:27,0:27:81.26:0,81,1118	0/0:40,0:40:99:0,105,1389	0/0:22,0:22:63.19:0,63,851	0/0:27,0:27:81.26:0,81,1106	0/0:19,0:19:57.18:0,57,781	0/0:22,0:22:66.22:0,66,923	0/0:17,0:17:45.13:0,45,599	0/0:26,0:26:72.24:0,72,1006	0/0:20,0:20:57.18:0,57,783	0/0:17,0:17:42.13:0,42,558	0/0:11,0:11:33.10:0,33,446	0/0:31,0:31:81.17:0,81,1034	1/1:5,31:36:93.06:1310,93,0	1/1:3,36:39:99:1669,99,0	1/1:0,27:26:66.23:1177,66,0	0/0:23,0:23:66.22:0,66,921	0/0:31,0:31:87.29:0,87,1217	0/0:26,0:26:78.21:0,78,1067	0/0:27,0:27:78.26:0,78,1092	1/1:1,34:35:60.40:1684,60,0	1/1:3,26:30:60.20:1042,60,0	1/1:2,23:25:60.21:1070,60,0
chr10	44033412	.	GCTAAA	G	25611.95	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=9.655;DP=556;FS=2.923;HRun=0;HaplotypeScore=159.3713;InbreedingCoeff=0.9943;MQ=66.89;MQ0=1;MQRankSum=-14.897;QD=57.43;ReadPosRankSum=5.251;VQSLOD=5.2399;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,24:24:57.19:1238,57,0	1/1:1,13:14:39.13:838,39,0	0/0:18,0:17:45.05:0,45,1194	0/0:28,0:28:25.88:0,26,2043	1/1:0,21:21:54.14:1141,54,0	0/0:26,0:26:78.27:0,78,2536	0/0:20,0:20:60.21:0,60,1989	1/1:0,18:18:54.14:1050,54,0	0/0:18,0:18:54.19:0,54,1789	1/1:0,31:32:87.23:1801,87,0	1/1:0,25:25:66.22:1387,66,0	1/1:0,24:24:69.24:1537,69,0	1/1:0,25:25:72.25:1604,72,0	1/1:0,29:29:84.29:1872,84,0	1/1:0,19:19:51.18:1137,51,0	1/1:0,13:13:33.11:736,33,0	1/1:0,15:15:39.13:840,39,0	1/1:0,7:7:21.07:468,21,0	1/1:0,6:6:15.05:334,15,0	1/1:1,24:25:72.16:1495,72,0	1/1:1,15:16:30.10:573,30,0	1/1:0,21:21:60.20:1285,60,0	1/1:0,16:16:45.15:983,45,0	1/1:0,17:17:30.10:668,30,0	1/1:0,18:18:45.15:988,45,0	1/1:0,20:20:57.18:1228,57,0	1/1:0,30:30:87.30:1875,87,0	1/1:0,11:11:24.08:535,24,0
chr10	44034300	.	CT	C	16530.67	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=9.568;DP=738;FS=6.011;HRun=7;HaplotypeScore=107.2989;InbreedingCoeff=0.9938;MQ=77.43;MQ0=0;MQRankSum=-3.040;QD=26.71;ReadPosRankSum=3.395;VQSLOD=4.7267;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,35:36:93.21:949,93,0	1/1:0,20:20:56.77:581,57,0	0/0:20,0:20:47.88:0,48,526	0/0:14,1:15:12.76:0,13,393	1/1:3,29:32:84.19:857,84,0	0/0:29,0:29:81.26:0,81,1018	0/0:23,0:23:66.21:0,66,830	1/1:3,27:30:81.14:811,81,0	0/0:32,0:32:96.31:0,96,1208	1/1:5,25:30:72.15:735,72,0	1/1:0,28:28:78.18:796,78,0	1/1:1,22:23:60.14:612,60,0	1/1:2,24:26:69.15:704,69,0	1/1:2,22:24:66.15:673,66,0	1/1:2,34:36:99:1040,102,0	1/1:1,22:23:66.15:673,66,0	1/1:1,20:21:54.12:551,54,0	1/1:2,17:19:48.11:490,48,0	1/1:2,20:22:60.13:611,60,0	1/1:3,27:30:72.11:724,72,0	1/1:2,20:22:57.13:582,57,0	1/1:2,22:24:66.15:673,66,0	1/1:3,32:35:90.20:918,90,0	1/1:1,31:32:78.17:796,78,0	1/1:1,25:26:66.15:673,66,0	1/1:2,26:28:72.15:734,72,0	1/1:0,29:29:75.17:765,75,0	1/1:2,21:23:56.68:581,57,0
chr10	44034779	.	T	TAC	1134.07	PASS	AB=1.000;AC=17;AF=0.340;AN=50;BaseQRankSum=2.999;DP=214;FS=31.905;HRun=0;HaplotypeScore=71.5524;InbreedingCoeff=0.5481;MQ=67.69;MQ0=3;MQRankSum=-4.618;QD=13.50;ReadPosRankSum=0.463;VQSLOD=1.5090;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,1:7:11.99:120,12,0	0/0:4,0:4:1.37:0,1,43	0/0:6,0:4:5.98:0,6,49	0/0:10,0:5:2.99:0,3,23	1/1:1,9:10:9.03:132,9,0	./.	0/0:1,0:1:3:0,3,25	0/0:35,0:35:73.22:0,73,657	./.	0/0:10,0:10:0.39:0,0,99	0/0:14,0:14:25.79:0,26,205	0/0:4,0:4:8.99:0,9,75	0/0:9,0:9:10.47:0,10,115	0/0:5,0:5:2.99:0,3,23	0/0:4,0:4:5.99:0,6,50	0/0:6,0:6:11.99:0,12,100	0/1:5,0:4:1.16:1,0,20	0/0:5,0:5:2.29:0,2,33	1/1:10,0:10:0.20:151,0,0	1/1:0,10:10:9.03:146,9,0	1/1:1,0:1:3:25,3,0	0/0:4,0:4:8.99:0,9,75	0/0:6,0:6:17.98:0,18,150	0/0:4,0:4:8.99:0,9,74	./.	1/1:3,8:11:3.06:282,3,0	1/1:3,12:15:13.85:181,14,0	1/1:4,11:15:15.05:253,15,0
chr10	44034818	.	A	ACATATATATATATGTATGTG	5830.22	PASS	AB=0.979;AC=30;AF=0.652;AN=46;BaseQRankSum=-0.730;DP=286;FS=1.769;HRun=0;HaplotypeScore=160.7169;InbreedingCoeff=0.2239;MQ=59.03;MQ0=4;MQRankSum=-4.638;QD=27.37;ReadPosRankSum=2.099;VQSLOD=3.9952;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:7,0:7:12.02:166,12,0	./.	0/0:12,0:7:17.55:0,18,284	0/0:29,0:8:11.42:0,11,90	1/1:15,0:15:12.51:199,13,0	0/0:1,0:1:3.01:0,3,73	0/0:1,0:1:3.01:0,3,74	1/1:40,0:40:99:1775,108,0	0/0:4,0:4:11.99:0,12,123	1/1:8,0:9:27.09:552,27,0	0/1:13,0:14:14.17:295,0,14	1/1:7,0:7:5.97:245,6,0	1/1:3,1:16:6.02:546,6,0	1/1:7,0:7:6.02:121,6,0	1/1:9,0:9:5.94:43,6,0	1/1:8,0:8:6.02:106,6,0	1/1:9,0:9:21.03:471,21,0	1/1:9,0:10:18.06:366,18,0	0/1:6,0:6:19.83:243,0,20	0/1:13,0:13:60.76:61,0,118	./.	1/1:2,0:2:3:25,3,0	./.	./.	./.	0/1:13,0:13:99:460,0,148	0/1:15,0:16:98.52:99,0,235	0/1:11,0:11:57.48:57,0,198
chr10	44035378	.	GC	G	24460.94	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=13.325;DP=771;FS=1.593;HRun=1;HaplotypeScore=126.2065;InbreedingCoeff=0.9997;MQ=76.56;MQ0=0;MQRankSum=-8.541;QD=37.87;ReadPosRankSum=5.354;VQSLOD=4.3498;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,38:38:99:1394,102,0	1/1:0,10:10:27.09:377,27,0	0/0:30,0:30:90.30:0,90,1381	0/0:17,0:17:48.14:0,48,721	1/1:0,28:28:81.23:1102,81,0	0/0:30,0:30:90.28:0,90,1384	0/0:23,0:23:69.17:0,69,1048	1/1:0,44:44:99:1756,132,0	0/0:25,0:25:75.22:0,75,1148	1/1:0,34:34:99:1289,99,0	1/1:1,27:28:72.08:944,72,0	1/1:0,18:18:54.18:754,54,0	1/1:0,31:31:87.29:1214,87,0	1/1:0,19:19:54.18:754,54,0	1/1:0,25:25:66.22:922,66,0	1/1:0,30:30:78.26:1090,78,0	1/1:0,22:22:54.18:752,54,0	1/1:0,15:15:42.14:583,42,0	1/1:0,25:25:75.20:994,75,0	1/1:0,38:38:99:1514,111,0	1/1:0,31:31:81.27:1131,81,0	1/1:0,27:27:78.26:1090,78,0	1/1:0,33:33:87.29:1206,87,0	1/1:0,35:35:99:1383,99,0	1/1:0,27:27:51.17:712,51,0	1/1:0,43:43:99:1742,126,0	1/1:0,32:32:93.31:1298,93,0	1/1:0,13:13:33.11:461,33,0
chr10	44035740	.	ATTCTACGACAGTTTTGGGATCT	A	5253.49	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=8.824;DP=580;FS=5.762;HRun=0;HaplotypeScore=400.7739;InbreedingCoeff=0.9782;MQ=90.21;MQ0=0;MQRankSum=-7.504;QD=79.60;ReadPosRankSum=2.102;VQSLOD=3.6083;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:93.28:0,93,7604	0/0:6,0:6:18.06:0,18,1381	0/0:27,0:27:78.25:0,78,4574	0/0:24,0:24:66.22:0,66,4196	0/0:24,0:24:69.24:0,69,5885	0/0:18,0:18:54.19:0,54,5140	0/0:18,0:18:48.16:0,48,4458	1/1:16,3:19:9.02:297,9,0	0/0:15,0:15:45.15:0,45,4615	1/1:6,12:18:36.11:2034,36,0	1/1:7,7:14:18.06:1095,18,0	0/0:28,0:28:84.26:0,84,6694	0/0:13,0:13:39.12:0,39,2914	0/0:18,0:18:51.15:0,51,4480	0/0:18,0:18:51.16:0,51,4165	0/0:26,0:26:78.25:0,78,6615	0/0:18,0:18:51.15:0,51,4104	0/0:8,0:8:24.04:0,24,1997	0/0:18,0:18:45.14:0,45,2721	0/0:46,0:46:99:0,117,10501	0/0:20,0:20:60.21:0,60,5497	0/0:17,0:17:45.14:0,45,3886	0/0:25,0:25:72.22:0,72,5783	0/0:23,0:23:69.24:0,69,5886	1/1:4,11:15:30.10:1826,30,0	0/0:24,0:24:69.24:0,69,6021	0/0:22,0:22:66.23:0,66,5745	0/0:25,0:25:75.26:0,75,6735
chr10	44036077	.	G	GGTGTGTGTGTGT	8941.72	PASS	AB=0.941;AC=45;AF=0.804;AN=56;BaseQRankSum=4.239;DP=476;FS=10.470;HRun=0;HaplotypeScore=185.6746;InbreedingCoeff=0.8259;MQ=66.16;MQ0=18;MQRankSum=-6.654;QD=28.21;ReadPosRankSum=-2.842;VQSLOD=3.0204;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:22:21:352,21,0	1/1:7,0:7:18:472,18,0	0/0:35,0:16:42.14:0,42,795	0/0:50,0:28:57.95:0,58,1440	1/1:10,0:10:11.19:82,11,0	0/0:18,0:18:48.13:0,48,1596	0/0:26,0:27:61.81:0,62,1826	1/1:23,0:20:24.68:413,25,0	0/0:29,0:29:81.23:0,81,2401	1/1:17,1:19:17.35:819,17,0	1/1:11,0:11:15.45:126,15,0	1/1:12,0:12:29.27:594,29,0	1/1:10,0:10:21.02:592,21,0	1/1:11,0:11:21.42:340,21,0	1/1:15,0:17:23.97:454,24,0	1/1:10,1:11:21.67:587,22,0	1/1:16,0:16:21.93:478,22,0	1/1:7,0:8:18.84:294,19,0	1/1:15,0:15:19.81:305,20,0	1/1:19,0:21:21.98:348,22,0	1/1:7,0:7:11.97:120,12,0	1/1:9,0:9:3.91:22,4,0	0/1:15,0:16:6.77:117,0,7	1/1:8,1:9:12.05:83,12,0	1/1:3,11:14:7.29:43,7,0	1/1:18,0:19:50.03:1221,50,0	1/1:11,0:13:24.47:604,24,0	1/1:13,0:14:24.92:478,25,0
chr10	44036124	.	GAC	G	440.39	PASS	AB=0.972;AC=28;AF=0.667;AN=42;BaseQRankSum=6.527;DP=393;FS=28.475;HRun=0;HaplotypeScore=98.8909;InbreedingCoeff=0.2361;MQ=32.88;MQ0=28;MQRankSum=-4.907;QD=2.19;ReadPosRankSum=-2.036;VQSLOD=-0.0108;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	1/1:4,0:4:5.84:35,6,0	0/1:28,0:3:0.91:1,0,16	0/0:44,0:5:14.82:0,15,99	./.	0/0:23,0:21:39.06:0,39,584	0/1:20,1:21:33.59:34,0,192	1/1:9,0:5:0.85:2,1,0	0/0:25,1:26:15.76:0,16,629	0/1:11,0:11:12.57:22,0,13	./.	1/1:5,0:3:2.94:18,3,0	0/0:7,0:7:0.89:0,1,2	1/1:13,1:11:2.94:18,3,0	1/1:14,3:16:3.35:17,3,0	1/1:6,4:10:4.97:23,5,0	1/1:6,0:6:5.93:40,6,0	1/1:4,0:3:1.93:19,2,0	1/1:6,0:5:6.46:60,6,0	1/1:15,1:15:2.92:17,3,0	./.	./.	0/1:10,0:10:0:0,0,0	./.	./.	1/1:18,1:19:31.65:172,32,0	0/1:12,1:13:11.93:80,0,12	0/1:6,0:4:3.25:12,0,3
chr10	44036128	.	GAC	G	444.19	PASS	AB=0.989;AC=25;AF=0.595;AN=42;BaseQRankSum=6.344;DP=386;FS=36.753;HRun=0;HaplotypeScore=86.6809;InbreedingCoeff=0.1612;MQ=31.40;MQ0=35;MQRankSum=-3.890;QD=2.17;ReadPosRankSum=-1.635;VQSLOD=0.1365;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	1/1:4,0:4:5.85:36,6,0	0/0:40,1:6:2.64:0,3,128	0/1:53,5:7:12.34:12,0,274	./.	0/0:21,0:19:33.03:0,33,576	0/1:20,0:20:17.45:17,0,250	0/0:6,0:2:0.42:0,0,1	0/0:24,0:24:17.84:0,18,680	0/1:9,0:9:16.74:17,0,20	./.	0/1:7,0:5:0.99:12,0,1	0/0:7,0:7:0.47:0,0,1	1/1:11,1:8:2.94:18,3,0	1/1:15,0:14:2.90:16,3,0	1/1:7,2:9:2.94:18,3,0	1/1:5,0:5:8.91:61,9,0	1/1:4,0:3:4.38:37,4,0	0/1:4,0:3:6.46:50,0,6	1/1:15,0:14:2.92:17,3,0	./.	./.	0/1:8,0:8:0:0,0,0	./.	./.	1/1:15,2:16:10.84:150,11,0	1/1:12,0:11:16.80:97,17,0	0/1:6,0:4:4.85:11,0,5
chr10	44036159	.	AGT	A	693.53	PASS	AB=0.947;AC=23;AF=0.479;AN=48;BaseQRankSum=2.516;DP=402;FS=1.754;HRun=0;HaplotypeScore=72.6742;InbreedingCoeff=0.3999;MQ=29.34;MQ0=44;MQRankSum=-1.480;QD=5.03;ReadPosRankSum=2.188;VQSLOD=2.4616;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	1/1:12,0:11:5.74:25,6,0	0/0:58,0:9:7.03:0,7,150	0/0:78,0:10:26.94:0,27,363	0/1:8,2:8:0:0,0,0	0/0:17,0:14:20.59:0,21,363	0/1:9,0:9:12.09:13,0,12	1/1:14,0:13:35.67:248,36,0	0/1:18,0:16:7.30:7,0,299	1/1:3,0:3:8.88:60,9,0	./.	0/0:13,0:10:5.71:0,6,18	0/1:8,0:8:6.94:7,0,7	0/0:13,0:10:0:0,0,0	0/0:11,0:11:0.82:0,1,2	0/0:12,0:11:3.99:0,4,12	1/1:5,0:5:2.96:19,3,0	0/0:6,0:6:1.36:0,1,3	1/1:2,1:3:8.95:88,9,0	1/1:10,3:13:5.77:32,6,0	./.	0/0:20,0:18:4.96:0,5,14	0/0:11,0:11:1.83:0,2,6	1/1:13,0:9:2.04:6,2,0	./.	1/1:10,2:12:19.32:211,19,0	1/1:9,0:8:10.60:58,11,0	0/1:8,1:5:4.38:66,0,4
chr10	44036160	.	GTC	G	947.31	PASS	AB=0.833;AC=26;AF=0.565;AN=46;BaseQRankSum=3.209;DP=387;FS=7.265;HRun=0;HaplotypeScore=66.7499;InbreedingCoeff=0.5614;MQ=29.62;MQ0=44;MQRankSum=-0.352;QD=7.83;ReadPosRankSum=3.626;VQSLOD=2.2884;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	1/1:9,1:9:7.77:57,8,0	0/0:58,0:9:17.50:0,17,85	0/0:78,0:10:25.96:0,26,218	0/1:4,4:8:0:0,0,0	0/0:17,0:14:12.08:0,12,263	0/1:11,0:11:18.22:54,0,18	1/1:14,0:13:30.62:108,31,0	0/0:16,1:15:22.26:0,22,276	1/1:1,2:3:8.62:89,9,0	./.	0/0:11,1:10:5.71:0,6,18	1/1:6,2:8:3:26,3,0	./.	0/0:9,2:11:0.82:0,1,2	0/0:11,1:11:3.99:0,4,12	1/1:2,2:4:2.04:6,2,0	1/1:6,0:6:2.11:12,2,0	1/1:3,0:3:7.60:47,8,0	1/1:3,10:13:6:68,6,0	./.	0/0:19,0:17:4.96:0,5,14	0/0:10,1:11:1.63:0,2,5	1/1:8,5:9:3:28,3,0	./.	1/1:4,7:11:32.56:371,33,0	1/1:2,7:9:9.03:109,9,0	1/1:5,3:4:11.40:127,11,0
chr10	44036172	.	G	GAC	344.51	PASS	AB=0.966;AC=23;AF=0.442;AN=52;BaseQRankSum=2.407;DP=412;FS=0.830;HRun=0;HaplotypeScore=89.1174;InbreedingCoeff=0.3690;MQ=35.68;MQ0=35;MQRankSum=-2.364;QD=1.58;ReadPosRankSum=0.305;VQSLOD=1.6661;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:10:0.47:1,0,0	1/1:12,0:11:8.80:54,9,0	0/0:31,0:7:11.90:0,12,92	0/0:49,0:7:14.68:0,15,121	0/0:9,0:9:4.96:0,5,18	0/0:18,0:15:17.88:0,18,135	0/1:17,0:17:3.54:4,0,52	0/1:21,0:20:61.87:62,0,150	0/0:18,0:16:26.72:0,27,197	1/1:8,0:7:20:113,20,0	./.	0/1:18,0:16:0:0,0,0	1/1:10,0:10:8.32:68,8,0	./.	0/1:16,0:16:0.06:0,0,0	0/1:16,0:15:0:0,0,0	0/1:5,4:9:10.23:10,0,21	1/1:5,0:5:2.90:16,3,0	0/0:4,0:4:4.92:0,5,23	0/1:15,0:15:1.69:2,0,27	0/0:9,0:7:4.87:0,5,17	0/1:24,0:22:0.02:0,0,0	0/0:16,0:16:0.47:0,0,1	1/1:14,0:10:3.01:51,3,0	1/1:4,6:10:6.02:102,6,0	0/1:12,0:11:5.19:5,0,84	0/0:10,0:9:14.19:0,14,70	0/0:12,0:8:21.41:0,21,94
chr10	44036174	.	G	GAC	1065.31	PASS	AB=1.000;AC=30;AF=0.600;AN=50;BaseQRankSum=4.654;DP=416;FS=3.732;HRun=0;HaplotypeScore=90.0678;InbreedingCoeff=0.2721;MQ=36.00;MQ0=34;MQRankSum=-1.095;QD=4.11;ReadPosRankSum=4.585;VQSLOD=2.1086;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,6:12:3.01:51,3,0	0/1:12,0:11:1.01:60,0,1	0/0:32,0:8:9.02:0,9,101	0/0:46,0:6:5.85:0,6,53	1/1:10,0:10:8.87:72,9,0	0/0:17,0:14:20.85:0,21,157	0/1:18,0:18:4.54:5,0,52	0/1:23,0:22:18.04:198,0,18	0/0:19,0:17:29.84:0,30,231	0/0:11,0:10:1.86:0,2,67	./.	0/1:17,0:16:0:0,0,0	1/1:10,0:10:8.44:56,8,0	./.	0/1:15,0:15:0.06:0,0,0	0/1:16,0:15:0:0,0,0	0/1:9,0:9:10.18:10,0,21	1/1:6,0:6:3.01:33,3,0	0/1:3,0:3:7.44:37,0,7	1/1:15,1:16:17.94:192,18,0	1/1:10,0:8:5.99:49,6,0	0/1:24,0:22:0.02:0,0,0	./.	1/1:13,0:10:2.98:21,3,0	0/1:10,0:10:33.54:34,0,34	1/1:12,0:11:5.53:145,6,0	1/1:9,1:9:14.46:82,14,0	1/1:12,0:8:23.70:165,24,0
chr10	44036198	.	G	GAGAC	2777.35	PASS	AB=1.000;AC=34;AF=0.654;AN=52;BaseQRankSum=8.247;DP=536;FS=2.673;HRun=0;HaplotypeScore=126.0190;InbreedingCoeff=0.6039;MQ=56.70;MQ0=27;MQRankSum=-3.894;QD=8.55;ReadPosRankSum=3.459;VQSLOD=2.8809;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:15:9:99,9,0	1/1:17,0:16:14.92:212,15,0	0/0:35,0:12:13.89:0,14,172	0/0:51,0:22:16.38:0,16,280	1/1:20,0:20:18.26:146,18,0	0/0:26,0:23:38.94:0,39,320	0/0:27,0:27:37.32:0,37,268	1/1:24,0:24:32.73:361,33,0	0/0:23,0:21:51.77:0,52,414	1/1:14,0:13:34.97:237,35,0	1/1:8,0:8:5.99:48,6,0	0/1:22,0:20:0:0,0,0	1/1:1,9:10:3.01:63,3,0	./.	0/1:20,0:20:0.15:0,0,0	0/0:14,0:14:2.87:0,3,25	0/1:11,0:11:6.41:96,0,6	0/1:16,0:16:18.94:59,0,19	0/1:9,0:9:0.09:143,0,0	1/1:23,0:23:40.52:349,41,0	1/1:26,0:24:23.68:194,24,0	0/1:26,0:25:0.01:0,0,0	./.	1/1:10,0:7:6:75,6,0	1/1:15,0:15:24:253,24,0	1/1:15,0:14:41.55:301,42,0	1/1:11,0:10:20.44:141,20,0	1/1:12,0:8:23.75:168,24,0
chr10	44036200	.	G	GACAC	5758.08	PASS	AB=0.614;AC=35;AF=0.673;AN=52;BaseQRankSum=4.264;DP=552;FS=12.179;HRun=0;HaplotypeScore=118.7056;InbreedingCoeff=0.6490;MQ=59.88;MQ0=25;MQRankSum=-2.424;QD=17.09;ReadPosRankSum=3.735;VQSLOD=4.0641;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:15:9.03:172,9,0	1/1:1,16:16:15.03:303,15,0	0/0:36,0:13:32.92:0,33,427	0/0:53,0:24:50.27:0,50,671	1/1:21,0:21:21.35:307,21,0	0/0:27,0:24:39.13:0,39,634	0/0:26,0:26:44.87:0,45,582	1/1:26,0:26:18.99:779,19,0	0/0:23,0:21:52.06:0,52,824	1/1:14,0:13:39.11:513,39,0	1/1:7,0:7:9.01:120,9,0	0/1:2,20:20:0:0,0,0	1/1:10,1:11:6.01:106,6,0	./.	0/1:2,20:24:0.15:0,0,0	0/0:2,11:15:2.89:0,3,49	1/1:11,0:11:18.03:226,18,0	0/1:1,15:17:43.47:78,0,43	0/1:9,0:9:26.36:307,0,26	1/1:24,0:24:41.99:640,42,0	1/1:26,0:24:29.79:435,30,0	0/1:1,26:27:0.01:0,0,0	./.	1/1:12,0:9:6.02:122,6,0	1/1:15,0:15:24.08:454,24,0	1/1:16,0:15:42.14:601,42,0	1/1:11,0:10:21.05:260,21,0	1/1:10,0:8:24.08:335,24,0
chr10	44038051	.	C	CA	5309.78	PASS	AB=0.622;AC=40;AF=0.714;AN=56;BaseQRankSum=13.196;DP=487;FS=27.734;HRun=0;HaplotypeScore=167.0559;InbreedingCoeff=0.4774;MQ=69.40;MQ0=1;MQRankSum=-11.276;QD=14.20;ReadPosRankSum=8.333;VQSLOD=3.8284;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,15:22:25.94:239,26,0	1/1:2,5:7:16.01:102,16,0	0/0:25,0:19:25.81:0,26,351	0/0:35,0:29:51.74:0,52,590	1/1:2,16:19:28.50:275,28,0	0/0:16,0:16:47.97:0,48,584	0/0:18,0:18:51.08:0,51,686	1/1:2,10:12:14.17:205,14,0	0/0:19,0:19:54.15:0,54,704	1/1:3,19:22:22.22:405,22,0	1/1:4,6:10:20.49:130,20,0	1/1:8,15:23:47.37:317,47,0	0/1:8,15:23:7.08:262,0,7	1/1:5,15:21:48.62:303,49,0	1/1:3,27:30:67.94:541,68,0	1/1:5,13:18:30.07:299,30,0	0/1:7,10:17:34.42:177,0,34	0/1:6,8:14:38.54:149,0,39	0/1:4,13:17:6.01:209,0,6	0/1:6,9:15:55.35:117,0,55	0/1:4,4:8:6.46:6,0,25	1/1:0,9:9:26.69:189,27,0	1/1:3,7:10:20.22:137,20,0	1/1:4,13:17:0.93:130,1,0	1/1:3,11:14:18.10:255,18,0	1/1:4,20:24:60.68:448,61,0	1/1:2,16:18:49.86:330,50,0	1/1:0,4:4:11.88:82,12,0
chr10	44038053	.	C	CCT	12077.58	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=10.716;DP=492;FS=44.276;HRun=0;HaplotypeScore=148.1409;InbreedingCoeff=0.9826;MQ=70.28;MQ0=1;MQRankSum=-10.655;QD=31.70;ReadPosRankSum=3.751;VQSLOD=3.6055;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,16:23:42.07:537,42,0	1/1:0,5:7:17.62:232,18,0	0/0:23,0:18:19.64:0,20,314	0/0:31,0:28:45.92:0,46,505	1/1:2,17:20:51.15:643,51,0	0/0:17,0:17:44.67:0,45,564	0/0:19,0:19:54.12:0,54,719	1/1:2,10:12:33.10:443,33,0	0/0:19,0:19:51.07:0,51,679	1/1:3,19:22:66.20:891,66,0	1/1:0,6:9:18.06:228,18,0	1/1:0,15:24:48.15:625,48,0	1/1:6,15:21:63.07:717,63,0	1/1:1,16:21:48.15:612,48,0	1/1:3,27:30:90.27:1158,90,0	1/1:5,13:18:52.73:628,53,0	1/1:5,10:15:38.93:430,39,0	1/1:5,8:13:35.93:409,36,0	1/1:6,13:19:53.80:603,54,0	1/1:7,9:18:39.06:440,39,0	1/1:6,4:10:14.99:149,15,0	1/1:1,9:10:27.03:327,27,0	1/1:0,7:10:20.90:278,21,0	1/1:4,13:17:35.57:436,36,0	1/1:3,11:14:42.03:528,42,0	1/1:4,20:24:69.20:889,69,0	1/1:1,16:20:54.18:716,54,0	1/1:0,4:4:12.04:160,12,0
chr10	44039103	.	ATGTGTGTGTGTGTGTGTG	A	20163.99	PASS	AB=0.632;AC=45;AF=0.804;AN=56;BaseQRankSum=12.169;DP=673;FS=3.250;HRun=0;HaplotypeScore=301.3301;InbreedingCoeff=0.7757;MQ=64.95;MQ0=4;MQRankSum=-8.131;QD=37.69;ReadPosRankSum=2.037;VQSLOD=3.3829;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,26:41:30.10:1185,30,0	1/1:2,9:11:14.62:735,15,0	0/0:21,0:16:6.02:0,6,112	0/0:35,0:22:24.02:0,24,264	1/1:7,15:22:26.93:626,27,0	0/0:23,0:24:57.20:0,57,4039	0/0:23,0:25:43.53:0,44,2678	1/1:13,15:27:45.02:516,45,0	0/0:31,0:33:66.18:0,66,3676	1/1:10,22:32:57.06:1896,57,0	1/1:8,16:24:33.11:1458,33,0	1/1:5,16:22:30.05:1323,30,0	1/1:6,12:17:15.05:736,15,0	1/1:8,12:20:12.04:589,12,0	1/1:7,21:28:30.10:1472,30,0	1/1:6,22:28:39.13:1914,39,0	1/1:4,18:22:18.06:883,18,0	0/1:5,7:11:99:231,0,229	1/1:5,9:13:10.03:527,10,0	1/1:11,14:25:18.06:474,18,0	1/1:12,8:20:3.01:78,3,0	1/1:8,23:31:27.09:732,27,0	1/1:5,17:22:24.06:785,24,0	1/1:8,27:35:12.04:497,12,0	1/1:5,17:22:20.97:851,21,0	1/1:5,17:22:47.98:1189,48,0	1/1:5,9:14:5.91:295,6,0	1/1:9,13:22:21.16:1173,21,0
chr10	44040099	.	TACACACACAC	T	3657.68	PASS	AB=0.738;AC=28;AF=0.519;AN=54;BaseQRankSum=5.642;DP=494;FS=5.374;HRun=0;HaplotypeScore=167.9025;InbreedingCoeff=0.3259;MQ=54.48;MQ0=11;MQRankSum=-6.046;QD=10.42;ReadPosRankSum=-2.248;VQSLOD=2.1850;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:16:5.55:0,6,71	0/0:6,0:9:14.92:0,15,258	./.	0/0:21,0:10:0.47:0,0,1	0/1:16,1:24:48.95:56,0,49	0/0:15,0:15:27.08:0,27,1205	0/0:20,0:19:24.08:0,24,815	1/1:23,0:30:4.05:13,4,0	0/0:18,0:18:21.06:0,21,802	1/1:13,0:22:12.04:279,12,0	1/1:7,0:21:23.36:494,23,0	1/1:11,9:21:18.62:454,19,0	1/1:9,8:17:18.06:465,18,0	1/1:8,11:19:15.05:412,15,0	0/1:10,0:16:5.91:140,0,6	1/1:11,0:20:16.75:158,17,0	0/0:3,0:6:5.91:0,6,86	0/1:9,0:13:13.94:50,0,14	0/0:8,0:13:17.69:0,18,174	0/1:8,0:15:12.41:12,0,68	0/0:13,0:12:8.74:0,9,63	1/1:14,5:21:18.51:351,19,0	0/1:12,13:25:3.81:343,0,4	1/1:12,7:20:5.95:129,6,0	1/1:9,0:14:9.03:209,9,0	0/1:16,1:24:59.93:60,0,259	0/1:10,0:16:15.70:16,0,40	0/1:7,0:8:15.96:16,0,63
chr10	44040801	.	AT	A	8219.44	PASS	AB=0.744;AC=46;AF=0.821;AN=56;BaseQRankSum=5.097;DP=474;FS=2.687;HRun=10;HaplotypeScore=50.0736;InbreedingCoeff=0.7720;MQ=75.76;MQ0=0;MQRankSum=-2.429;QD=19.66;ReadPosRankSum=2.496;VQSLOD=5.7068;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,16:21:28.24:382,28,0	1/1:1,5:6:15:130,15,0	0/0:17,0:14:30.50:0,30,298	0/0:9,0:7:3.35:0,3,34	1/1:3,28:31:80.97:703,81,0	0/0:15,0:15:45.12:0,45,498	0/1:11,1:12:1.99:2,0,208	1/1:8,21:29:62.87:525,63,0	0/0:15,0:15:42.11:0,42,465	1/1:5,20:25:56.97:495,57,0	1/1:2,24:27:68.01:579,68,0	1/1:1,14:15:35.98:312,36,0	1/1:1,12:13:26.98:234,27,0	1/1:2,6:8:14.99:130,15,0	1/1:1,18:19:38.99:339,39,0	1/1:0,12:12:32.99:287,33,0	1/1:1,18:19:50.99:443,51,0	1/1:1,12:13:29.99:260,30,0	1/1:3,14:17:41.99:364,42,0	1/1:3,23:26:68.28:573,68,0	1/1:5,2:7:5.99:52,6,0	1/1:1,10:11:29.98:260,30,0	1/1:3,12:15:35.99:313,36,0	1/1:0,14:14:35.99:313,36,0	1/1:0,15:15:41.99:365,42,0	1/1:3,16:19:44.94:381,45,0	1/1:5,26:31:65.76:573,66,0	0/1:3,10:13:3.19:204,0,3
chr10	44041711	.	CCTCTTCCTTCTTCCT	C	23105.35	PASS	AB=0.665;AC=44;AF=0.786;AN=56;BaseQRankSum=12.759;DP=533;FS=9.550;HRun=0;HaplotypeScore=252.4931;InbreedingCoeff=0.7536;MQ=41.14;MQ0=11;MQRankSum=-10.899;QD=60.64;ReadPosRankSum=-0.318;VQSLOD=2.5429;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,8:30:79.89:1959,80,0	1/1:1,4:5:10.32:385,10,0	0/0:24,0:9:27.09:0,27,802	0/0:32,0:16:48.16:0,48,1530	1/1:2,2:8:9.85:112,10,0	0/0:27,0:27:75.24:0,75,4332	0/0:35,0:35:99:0,100,4977	0/1:20,0:24:99:761,0,165	0/0:34,0:34:93.32:0,93,5317	0/1:2,27:29:19.30:1597,0,19	1/1:2,9:11:11.96:276,12,0	1/1:12,10:27:66.14:2130,66,0	1/1:3,6:16:48.15:1470,48,0	1/1:3,9:16:43.96:1586,44,0	1/1:4,10:18:52.84:1626,53,0	1/1:3,12:24:69.24:2380,69,0	1/1:9,6:17:39.04:1130,39,0	1/1:10,3:18:50.15:1400,50,0	1/1:5,1:6:15.05:441,15,0	1/1:6,1:8:14.70:283,15,0	1/1:13,2:16:25.68:421,26,0	1/1:6,6:14:24.72:443,25,0	1/1:4,3:9:20.39:350,20,0	1/1:10,5:18:21.98:292,22,0	1/1:3,23:26:27.09:1043,27,0	1/1:8,4:16:45.15:1448,45,0	1/1:4,7:16:43.95:1315,44,0	1/1:4,0:5:12.02:256,12,0
chr10	44041712	.	C	CT	2677.54	PASS	AB=0.935;AC=32;AF=0.571;AN=56;BaseQRankSum=4.330;DP=524;FS=2.001;HRun=1;HaplotypeScore=209.3722;InbreedingCoeff=0.1152;MQ=40.59;MQ0=11;MQRankSum=-4.365;QD=7.42;ReadPosRankSum=-0.778;VQSLOD=0.3507;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:28,1:29:99:179,0,107	1/1:5,0:5:1.84:12,2,0	0/0:25,0:9:27.06:0,27,324	0/0:29,0:16:48.12:0,48,591	1/1:8,0:8:4.19:21,4,0	0/0:25,0:25:75.21:0,75,944	0/0:36,0:36:99:0,104,1306	0/1:24,2:24:52.49:196,0,52	0/0:34,0:34:93.30:0,93,1204	0/1:29,0:29:98.61:118,0,99	0/0:11,0:11:2.94:0,3,29	0/1:22,1:23:50.72:203,0,51	1/1:14,2:16:26.95:245,27,0	1/1:15,1:16:8.38:135,8,0	1/1:18,0:18:11.51:173,12,0	1/1:22,1:23:14.48:241,14,0	0/1:12,4:16:8.35:210,0,8	0/1:15,3:18:5.49:271,0,5	0/1:7,1:7:19.14:71,0,19	0/1:6,1:7:6.74:29,0,7	0/1:16,1:16:17.94:18,0,79	0/1:14,0:14:4.86:5,0,20	0/1:9,0:9:2.20:65,0,2	1/1:13,5:18:14.90:106,15,0	0/1:26,0:26:3.64:4,0,86	1/1:14,2:16:1.96:169,2,0	1/1:13,2:15:27.09:262,27,0	1/1:4,0:4:12.01:121,12,0
chr10	44041718	.	CT	C	4267.92	PASS	AB=0.752;AC=40;AF=0.714;AN=56;BaseQRankSum=13.507;DP=488;FS=11.043;HRun=2;HaplotypeScore=191.3884;InbreedingCoeff=0.5550;MQ=41.48;MQ0=11;MQRankSum=-9.855;QD=13.05;ReadPosRankSum=2.239;VQSLOD=3.0110;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:15,7:28:7.04:436,7,0	1/1:4,0:4:8.20:63,8,0	0/0:26,0:10:21.82:0,22,343	0/0:30,0:14:39.13:0,39,584	0/0:4,2:7:2.69:0,3,8	0/0:28,0:28:84.28:0,84,1254	0/0:38,0:38:99:0,111,1492	0/1:10,4:15:63.54:169,0,64	0/0:32,0:32:90.30:0,90,1343	1/1:28,0:28:37.38:252,37,0	1/1:9,0:9:8.87:64,9,0	1/1:12,5:20:50.91:337,51,0	1/1:9,2:17:36.98:242,37,0	1/1:12,1:16:38.76:243,39,0	1/1:12,2:17:34.79:258,35,0	1/1:15,2:23:58.67:404,59,0	1/1:8,4:12:23.78:191,24,0	1/1:9,4:17:5.14:266,5,0	0/1:7,1:7:18.84:72,0,19	1/1:4,2:6:6.78:103,7,0	0/1:6,7:13:10.82:111,0,11	1/1:6,2:11:11.96:128,12,0	1/1:6,0:8:17.86:143,18,0	0/1:11,3:16:8.42:32,0,8	1/1:23,0:23:24.95:188,25,0	1/1:8,4:16:33.25:304,33,0	1/1:11,1:15:33.25:199,33,0	1/1:2,1:3:8.21:64,8,0
chr10	44041724	.	CCT	C	1903.98	PASS	AB=0.983;AC=27;AF=0.482;AN=56;BaseQRankSum=12.487;DP=525;FS=4.842;HRun=0;HaplotypeScore=220.2113;InbreedingCoeff=-0.2136;MQ=42.07;MQ0=12;MQRankSum=-9.250;QD=5.22;ReadPosRankSum=1.625;VQSLOD=2.5096;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:30:74.46:74,0,140	0/1:5,0:5:13.43:24,0,13	0/0:24,0:10:21.84:0,22,382	0/0:35,0:18:51.15:0,51,896	1/1:6,0:6:7.91:52,8,0	0/0:31,0:31:87.30:0,87,1609	0/0:35,0:35:90.96:0,91,1832	0/1:11,8:17:99:300,0,113	0/0:29,0:29:87.30:0,87,1611	1/1:28,0:29:5.85:312,6,0	1/1:9,0:9:12.04:164,12,0	0/1:22,0:22:91.01:96,0,91	0/1:17,0:17:64.14:64,0,118	0/1:15,0:15:32.08:92,0,32	0/1:20,0:20:41.44:96,0,41	0/1:23,0:23:96.84:97,0,106	0/1:18,0:18:40.74:41,0,69	0/1:18,0:18:40.77:41,0,105	0/1:10,0:8:3.73:49,0,4	0/1:9,0:9:15.10:15,0,24	0/1:19,0:18:16.12:100,0,16	1/1:12,0:12:4.95:59,5,0	0/1:10,0:10:11.47:11,0,50	0/1:20,0:20:3.54:32,0,4	1/1:23,0:23:11.25:186,11,0	0/1:17,0:17:92.04:102,0,92	0/1:14,0:14:50.43:68,0,50	0/0:6,0:6:17.76:0,18,123
chr10	44041731	.	C	CT	5502.43	PASS	AB=0.751;AC=26;AF=0.464;AN=56;BaseQRankSum=9.064;DP=551;FS=11.367;HRun=1;HaplotypeScore=205.7882;InbreedingCoeff=-0.0524;MQ=50.21;MQ0=12;MQRankSum=-8.766;QD=16.28;ReadPosRankSum=1.311;VQSLOD=3.4441;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:22,9:31:55.36:507,0,55	1/1:4,2:6:15.93:199,16,0	0/0:29,0:13:24.02:0,24,296	0/0:36,0:20:46.19:0,46,615	1/1:5,2:7:9.49:124,9,0	0/0:30,0:30:90.29:0,90,1165	0/0:36,0:36:99:0,107,1321	0/0:21,0:19:17.31:0,17,228	0/0:30,0:30:87.23:0,87,1083	0/1:30,1:31:11.96:12,0,356	0/0:9,0:9:5.45:0,5,64	0/1:14,8:22:89.18:380,0,89	0/1:12,6:18:99:193,0,169	0/1:14,4:18:83.92:215,0,84	0/1:15,8:23:59.63:421,0,60	0/1:21,4:25:99:200,0,103	1/1:6,11:17:0.26:456,0,0	0/1:9,9:18:99:271,0,130	0/1:5,3:7:7.01:77,0,7	1/1:4,6:10:24.05:334,24,0	1/1:6,13:18:13.77:374,14,0	0/1:10,5:15:14.89:385,0,15	0/1:6,5:11:19.81:282,0,20	1/1:10,11:21:15.90:287,16,0	0/0:22,0:22:19.26:0,19,191	0/1:9,8:17:43.26:384,0,43	0/1:10,5:15:25.15:199,0,25	0/1:2,4:6:15.57:203,0,16
chr10	44041734	.	CTCT	C	6453.16	PASS	AB=0.986;AC=41;AF=0.732;AN=56;BaseQRankSum=14.159;DP=568;FS=18.522;HRun=0;HaplotypeScore=219.2183;InbreedingCoeff=0.5225;MQ=51.64;MQ0=12;MQRankSum=-10.171;QD=15.82;ReadPosRankSum=-0.879;VQSLOD=2.5244;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:22,8:31:53.36:536,53,0	1/1:2,4:6:2.44:129,2,0	0/0:27,0:12:27.66:0,28,390	0/0:36,0:20:44.54:0,45,981	1/1:7,2:9:17.19:119,17,0	0/0:30,0:30:90.21:0,90,1788	0/0:36,0:37:99:0,104,1944	0/1:20,0:18:60.43:61,0,60	0/0:30,0:30:90.22:0,90,1836	0/1:34,0:34:29.24:192,0,29	0/1:11,0:11:11.21:39,0,11	1/1:12,10:22:17.05:535,17,0	1/1:13,6:19:26.52:348,27,0	1/1:10,9:19:51.69:547,52,0	1/1:12,10:22:49.63:513,50,0	1/1:10,13:23:46.11:540,46,0	1/1:13,6:19:9.37:318,9,0	1/1:14,3:17:26.81:270,27,0	0/1:12,1:12:7.96:210,0,8	1/1:8,1:10:9.36:153,9,0	1/1:18,2:19:19.05:146,19,0	1/1:8,7:15:44.22:346,44,0	1/1:9,3:12:24.51:166,25,0	1/1:17,5:22:17.60:277,18,0	1/1:22,1:23:29.32:219,29,0	1/1:18,4:22:41.47:443,41,0	1/1:6,7:13:23.60:333,24,0	0/1:6,0:6:10.35:14,0,10
chr10	44042108	.	A	AT	8636.86	PASS	AB=0.692;AC=45;AF=0.804;AN=56;BaseQRankSum=5.084;DP=450;FS=7.638;HRun=7;HaplotypeScore=112.6159;InbreedingCoeff=0.8507;MQ=66.95;MQ0=2;MQRankSum=-3.836;QD=22.97;ReadPosRankSum=0.392;VQSLOD=3.8666;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:20,1:21:44.14:353,44,0	1/1:2,8:10:27.08:325,27,0	0/0:30,0:15:20.24:0,20,226	0/0:14,0:9:5.98:0,6,52	1/1:32,3:35:73.66:563,74,0	0/0:3,0:3:9.01:0,9,87	0/0:12,0:12:36.04:0,36,341	1/1:16,7:23:41.84:466,42,0	0/0:15,0:15:36.05:0,36,347	1/1:6,10:16:39.09:436,39,0	1/1:8,7:15:33.94:376,34,0	1/1:2,6:8:21.06:252,21,0	1/1:5,8:13:24.07:290,24,0	1/1:4,8:12:30.07:348,30,0	1/1:7,12:19:22.15:531,22,0	1/1:9,8:17:39.11:459,39,0	1/1:7,10:17:41.84:458,42,0	1/1:7,6:13:29.08:315,29,0	1/1:21,1:22:47.36:399,47,0	1/1:17,1:18:49.03:374,49,0	1/1:14,0:14:33:309,33,0	0/1:5,4:9:10.91:160,0,11	1/1:4,13:17:45.14:538,45,0	1/1:2,6:8:21.06:252,21,0	1/1:7,12:19:42.33:451,42,0	1/1:16,0:16:38.46:317,38,0	1/1:24,1:25:67.46:511,67,0	1/1:9,0:9:20.77:153,21,0
chr10	44042117	.	C	CT	1268.54	PASS	AB=0.892;AC=9;AF=0.161;AN=56;BaseQRankSum=-2.256;DP=451;FS=8.940;HRun=11;HaplotypeScore=138.0850;InbreedingCoeff=0.5926;MQ=65.72;MQ0=3;MQRankSum=-2.218;QD=11.97;ReadPosRankSum=-3.325;VQSLOD=1.1864;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:19:33.34:0,33,193	0/0:10,0:10:18.29:0,18,84	0/0:40,0:17:0.70:0,1,47	0/1:20,0:11:0.13:0,0,48	0/0:26,0:36:74.75:0,75,414	0/0:4,0:4:11.95:0,12,91	0/0:12,0:13:37.73:0,38,271	1/1:7,16:24:29.56:435,30,0	0/0:14,0:16:42.92:0,43,312	1/1:3,11:14:36.05:353,36,0	1/1:6,11:17:33.02:319,33,0	0/0:9,0:9:18.47:0,18,103	0/0:10,0:10:18.68:0,19,93	0/1:10,0:10:10.39:10,0,38	0/0:18,0:18:32.88:0,33,173	0/0:18,0:18:32.81:0,33,183	0/0:14,0:14:21.18:0,21,85	0/0:11,0:11:22.76:0,23,116	0/0:16,0:19:35.30:0,35,205	0/0:17,0:18:33.42:0,33,205	0/0:10,0:10:19.83:0,20,103	0/0:8,0:8:14.37:0,14,95	0/0:18,1:19:0.22:0,0,134	0/0:8,0:8:8.86:0,9,39	0/1:11,10:21:3.29:300,0,3	0/0:13,0:14:31.93:0,32,169	0/0:23,0:23:52.41:0,52,331	0/0:8,0:8:20.57:0,21,127
chr10	44042172	.	TTTTTTTC	T	19789.41	PASS	AB=0.519;AC=45;AF=0.804;AN=56;BaseQRankSum=5.414;DP=444;FS=1.807;HRun=0;HaplotypeScore=153.5319;InbreedingCoeff=0.8642;MQ=61.53;MQ0=0;MQRankSum=-10.876;QD=53.78;ReadPosRankSum=1.967;VQSLOD=4.7530;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,12:17:36.12:860,36,0	1/1:2,7:9:21.07:503,21,0	0/0:20,0:11:20.78:0,21,759	0/0:17,0:14:24.28:0,24,472	1/1:3,27:30:63.17:1455,63,0	0/0:10,0:10:30.10:0,30,1126	0/0:12,0:12:33.11:0,33,1189	1/1:4,16:16:45.14:1030,45,0	0/0:16,0:16:48.16:0,48,1780	1/1:3,22:25:69.23:1605,69,0	1/1:6,16:22:45.11:1022,45,0	1/1:3,14:17:39.13:933,39,0	1/1:4,4:8:12.04:287,12,0	1/1:5,5:10:18.06:416,18,0	1/1:4,9:12:21.07:503,21,0	0/1:1,13:14:70.43:891,0,70	1/1:1,15:16:45.14:1029,45,0	1/1:3,9:12:24.08:572,24,0	1/1:5,15:20:45.14:1024,45,0	1/1:5,14:19:45.15:1056,45,0	1/1:0,5:5:15.05:356,15,0	1/1:0,10:10:24.08:574,24,0	1/1:4,17:21:54.18:1253,54,0	1/1:1,5:6:12.04:287,12,0	1/1:1,22:23:66.23:1579,66,0	1/1:5,17:22:51.10:1118,51,0	1/1:4,17:21:42.14:1005,42,0	1/1:1,7:8:18.06:431,18,0
chr10	44042293	.	C	CT	11529.65	PASS	AB=1.000;AC=48;AF=0.857;AN=56;BaseQRankSum=-1.430;DP=425;FS=3.526;HRun=6;HaplotypeScore=58.3773;InbreedingCoeff=0.7736;MQ=75.45;MQ0=1;MQRankSum=-2.490;QD=30.34;ReadPosRankSum=1.228;VQSLOD=5.6057;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,17:17:39.12:490,39,0	1/1:0,5:5:12.04:151,12,0	0/1:17,0:15:5.93:6,0,69	0/1:13,0:11:4.40:4,0,79	1/1:1,20:21:60.19:755,60,0	0/0:19,0:19:51.12:0,51,520	0/0:15,0:15:42.10:0,42,428	1/1:4,22:24:60.19:754,60,0	0/0:11,0:11:33.08:0,33,337	1/1:3,12:15:42.12:512,42,0	1/1:1,18:19:48.15:604,48,0	1/1:0,10:10:30.10:377,30,0	1/1:1,14:15:39.12:490,39,0	1/1:2,12:14:36.11:442,36,0	1/1:1,18:19:51.16:641,51,0	1/1:0,16:16:45.14:566,45,0	1/1:3,19:22:54.13:661,54,0	1/1:2,17:19:45.14:566,45,0	1/1:0,15:15:45.10:547,45,0	1/1:1,19:20:57.14:699,57,0	1/1:1,7:8:15.05:189,15,0	1/1:0,7:7:18.02:209,18,0	1/1:2,13:15:36.01:453,36,0	1/1:0,9:9:24.08:302,24,0	1/1:1,8:9:24.08:302,24,0	1/1:0,18:18:54.17:678,54,0	1/1:0,17:17:48.15:603,48,0	1/1:0,14:14:42.13:528,42,0
chr10	44042325	.	TG	T	281.57	PASS	AB=0.754;AC=2;AF=0.036;AN=56;BaseQRankSum=6.122;DP=431;FS=2.443;HRun=1;HaplotypeScore=83.1696;InbreedingCoeff=0.3016;MQ=73.17;MQ0=3;MQRankSum=6.136;QD=9.71;ReadPosRankSum=-2.770;VQSLOD=0.3441;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:36.04:0,36,544	0/0:5,0:5:15.05:0,15,240	0/1:9,7:11:1.53:250,0,2	0/1:10,3:9:77.95:121,0,78	0/0:26,0:26:78.27:0,78,1245	0/0:23,0:23:69.24:0,69,1102	0/0:16,0:16:48.15:0,48,744	0/0:26,0:24:72.22:0,72,1078	0/0:10,0:10:30.10:0,30,478	0/0:18,0:18:51.17:0,51,796	0/0:18,0:18:54.18:0,54,863	0/0:14,0:14:42.14:0,42,669	0/0:13,0:13:39.13:0,39,617	0/0:12,0:12:36.12:0,36,574	0/0:18,0:18:48.16:0,48,765	0/0:15,0:15:45.15:0,45,707	0/0:21,0:21:60.19:0,60,934	0/0:15,0:15:45.15:0,45,718	0/0:19,0:18:51.12:0,51,764	0/0:15,0:15:45.14:0,45,694	0/0:12,0:12:36.12:0,36,570	0/0:5,0:5:15.05:0,15,238	0/0:18,0:18:54.18:0,54,862	0/0:9,0:9:27.07:0,27,407	0/0:10,0:10:30.09:0,30,454	0/0:23,0:23:69.24:0,69,1102	0/0:19,0:19:57.19:0,57,904	0/0:8,0:8:24.08:0,24,383
chr10	44042331	.	TA	T	145.63	PASS	AB=0.779;AC=2;AF=0.036;AN=56;BaseQRankSum=5.131;DP=436;FS=0.000;HRun=1;HaplotypeScore=79.9324;InbreedingCoeff=-0.0362;MQ=68.92;MQ0=4;MQRankSum=5.131;QD=5.60;ReadPosRankSum=-2.779;VQSLOD=-0.6800;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:39.11:0,39,585	0/0:5,0:5:15.05:0,15,240	0/1:8,6:8:26.64:172,0,27	0/1:10,2:7:62.48:62,0,81	0/0:28,0:28:81.25:0,81,1245	0/0:22,0:22:66.23:0,66,1055	0/0:17,0:17:51.17:0,51,812	0/0:22,0:21:63.21:0,63,982	0/0:13,0:13:36.09:0,36,517	0/0:17,0:17:51.17:0,51,815	0/0:21,0:21:63.20:0,63,980	0/0:14,0:14:42.14:0,42,660	0/0:14,0:14:40.35:0,40,574	0/0:13,0:13:39.13:0,39,605	0/0:17,0:17:48.15:0,48,743	0/0:15,0:15:45.13:0,45,662	0/0:21,0:21:57.10:0,57,824	0/0:15,0:15:45.05:0,45,662	0/0:20,0:19:51.13:0,51,786	0/0:15,0:15:45.15:0,45,715	0/0:12,0:12:36.10:0,36,550	0/0:5,0:5:15.05:0,15,240	0/0:17,0:17:51.17:0,51,800	0/0:9,0:9:27.08:0,27,408	0/0:9,0:9:27.07:0,27,387	0/0:24,0:24:72.17:0,72,1075	0/0:18,0:18:54.18:0,54,847	0/0:11,0:11:33.08:0,33,477
chr10	44042464	.	CT	C	10217.61	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=10.934;DP=518;FS=22.616;HRun=8;HaplotypeScore=124.6131;InbreedingCoeff=0.9950;MQ=66.57;MQ0=0;MQRankSum=-3.073;QD=23.93;ReadPosRankSum=1.262;VQSLOD=3.3398;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,20:20:57.09:550,57,0	1/1:0,12:12:33.05:318,33,0	0/0:15,0:14:22.84:0,23,319	0/0:13,0:11:19.03:0,19,213	1/1:3,24:27:69.11:666,69,0	0/0:29,0:29:84.25:0,84,1003	0/0:14,0:14:36.11:0,36,435	1/1:5,23:28:69.07:655,69,0	0/0:20,0:20:57.16:0,57,668	1/1:3,25:28:75.08:711,75,0	1/1:1,11:12:33.05:317,33,0	1/1:0,13:13:36.06:348,36,0	1/1:1,21:22:60.07:579,60,0	1/1:4,15:19:36.05:348,36,0	1/1:0,19:19:51.08:493,51,0	1/1:1,10:11:24.04:232,24,0	1/1:1,23:24:54.09:521,54,0	1/1:2,14:16:36.06:347,36,0	1/1:1,18:19:54.05:509,54,0	1/1:1,16:17:42.06:404,42,0	1/1:1,9:10:27.04:261,27,0	1/1:2,15:17:38.91:362,39,0	1/1:2,14:16:36.05:347,36,0	1/1:3,15:18:42.06:406,42,0	1/1:3,23:26:63.10:608,63,0	1/1:1,20:21:60.05:569,60,0	1/1:1,21:21:51.08:492,51,0	1/1:4,6:10:18.03:174,18,0
chr10	44045057	.	AC	A	1893.88	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.267;DP=647;FS=2.380;HRun=4;HaplotypeScore=63.5446;InbreedingCoeff=0.9970;MQ=78.72;MQ0=0;MQRankSum=0.060;QD=30.06;ReadPosRankSum=1.189;VQSLOD=3.9407;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:96.32:0,96,1344	0/0:7,0:7:18.06:0,18,252	0/0:15,0:15:45.15:0,45,621	0/0:16,0:16:45.11:0,45,590	0/0:31,0:31:81.26:0,81,1116	0/0:19,0:19:54.18:0,54,756	0/0:24,0:24:72.24:0,72,1008	0/0:33,0:33:96.31:0,96,1314	0/0:21,0:21:54.18:0,54,756	0/0:44,0:44:99:0,129,1777	0/0:17,0:17:48.16:0,48,669	0/0:31,0:31:93.27:0,93,1266	0/0:28,0:28:81.25:0,81,1112	0/0:26,0:26:75.24:0,75,1034	1/1:0,20:20:60.18:720,60,0	1/1:1,27:28:75.19:885,75,0	0/0:32,0:31:93.26:0,93,1246	1/1:0,15:15:36.11:432,36,0	0/0:24,0:24:66.20:0,66,878	0/0:23,0:23:63.21:0,63,882	0/0:16,0:16:42.13:0,42,570	0/0:20,0:20:60.19:0,60,820	0/0:20,0:20:57.18:0,57,781	0/0:13,0:13:39.12:0,39,529	0/0:21,0:21:63.16:0,63,842	0/0:28,0:28:81.27:0,81,1134	0/0:24,0:24:69.21:0,69,945	0/0:18,0:18:39.13:0,39,545
chr10	44045248	.	T	TAACC	2710.45	PASS	AB=0.955;AC=9;AF=0.161;AN=56;BaseQRankSum=-0.421;DP=753;FS=3.054;HRun=0;HaplotypeScore=115.7172;InbreedingCoeff=0.8479;MQ=55.87;MQ0=8;MQRankSum=-4.667;QD=18.31;ReadPosRankSum=-3.045;VQSLOD=2.6904;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:39:84.02:0,84,1342	0/0:9,0:9:12.04:0,12,193	0/0:28,0:12:14.90:0,15,171	0/0:29,0:13:12.74:0,13,186	0/0:25,0:25:47.94:0,48,663	0/0:26,0:25:54.16:0,54,831	0/0:15,0:15:21.04:0,21,292	1/1:52,0:50:69.05:811,69,0	0/0:22,0:22:54.14:0,54,816	1/1:27,6:31:48.13:1064,48,0	1/1:15,1:16:35.16:549,35,0	0/0:26,0:26:57.16:0,57,872	0/0:27,0:27:51.14:0,51,801	0/0:24,0:24:51.15:0,51,792	0/0:34,0:35:89.52:0,90,1412	0/0:24,0:24:54.17:0,54,854	0/0:35,0:35:75.19:0,75,1134	0/0:23,0:23:30.57:0,31,550	0/0:31,0:31:40.42:0,40,554	0/0:27,0:27:60.20:0,60,973	0/0:46,0:45:87.43:0,87,1256	0/0:19,0:19:48.16:0,48,755	0/0:23,0:23:42.13:0,42,630	0/0:34,0:34:90.29:0,90,1411	1/1:10,15:26:18.06:425,18,0	0/1:20,1:21:25.16:25,0,680	0/0:20,0:20:42.14:0,42,655	0/0:17,0:17:42.07:0,42,629
chr10	44045300	.	CAAGT	C	1657.43	PASS	AB=0.915;AC=8;AF=0.143;AN=56;BaseQRankSum=8.017;DP=763;FS=3.142;HRun=0;HaplotypeScore=123.5689;InbreedingCoeff=-0.1697;MQ=52.27;MQ0=25;MQRankSum=-6.704;QD=7.47;ReadPosRankSum=-5.077;VQSLOD=0.9997;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:27.12:0,27,1021	0/0:12,0:12:36.12:0,36,740	0/0:37,1:5:14.52:0,15,144	0/0:32,0:5:9.03:0,9,138	0/1:20,14:34:99:502,0,909	0/0:21,0:21:63.21:0,63,1277	0/0:17,0:17:45.15:0,45,930	0/1:31,0:29:3.76:4,0,1108	0/0:32,0:31:90.31:0,90,2120	0/1:38,0:35:99:220,0,1102	0/0:18,0:18:10.75:0,11,364	0/0:23,0:23:69.19:0,69,1474	0/0:21,0:21:63.21:0,63,1211	0/0:35,0:35:99:0,102,2290	0/0:41,0:41:99:0,119,2579	0/0:28,0:28:84.18:0,84,1795	0/0:39,0:39:99:0,115,2518	0/0:20,0:20:15.01:0,15,923	0/1:28,0:25:99:258,0,696	0/0:22,0:21:41.60:0,42,556	0/1:35,0:33:99:156,0,1130	0/0:24,0:24:69.22:0,69,1343	0/0:24,0:24:60.20:0,60,1316	0/0:39,0:39:99:0,108,2401	0/1:16,1:17:99:273,0,317	0/1:23,0:23:99:128,0,846	0/1:8,8:16:99:248,0,392	0/0:15,0:15:7:0,7,332
chr10	44045304	.	T	TAACCAACC	7140.78	PASS	AB=0.847;AC=24;AF=0.429;AN=56;BaseQRankSum=-1.238;DP=799;FS=1.953;HRun=0;HaplotypeScore=173.9694;InbreedingCoeff=0.7701;MQ=52.72;MQ0=27;MQRankSum=-3.531;QD=19.30;ReadPosRankSum=-5.286;VQSLOD=2.4016;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:24,13:43:30.81:319,0,31	0/0:12,0:12:24.08:0,24,528	0/0:43,0:8:2.99:0,3,25	0/0:29,0:5:3.01:0,3,40	1/1:36,0:36:45.15:1150,45,0	0/0:21,0:21:18.06:0,18,449	0/0:17,0:17:21.05:0,21,424	1/1:29,0:25:15.05:213,15,0	0/0:30,0:29:69.24:0,69,1571	1/1:19,19:44:65.95:1355,66,0	1/1:12,7:23:12.04:317,12,0	0/0:23,0:23:45.14:0,45,928	0/0:22,0:22:27.09:0,27,625	0/0:35,0:35:72.23:0,72,1607	0/0:42,0:42:69.22:0,69,1614	0/0:29,0:29:54.17:0,54,1236	0/0:40,0:41:72.69:0,73,1707	0/1:21,0:21:5.53:6,0,430	1/1:20,12:29:42.10:1105,42,0	1/1:14,7:22:6.02:159,6,0	1/1:31,0:30:33.09:580,33,0	0/0:24,0:24:45.14:0,45,942	0/0:21,0:21:39.13:0,39,773	0/0:39,0:39:81.20:0,81,1825	1/1:17,0:17:18.06:348,18,0	1/1:13,12:30:51.13:1076,51,0	1/1:17,0:17:14.97:390,15,0	1/1:7,7:18:3.01:123,3,0
chr10	44050983	.	G	GA	2983.06	PASS	AB=0.849;AC=37;AF=0.661;AN=56;BaseQRankSum=0.274;DP=510;FS=8.613;HRun=14;HaplotypeScore=95.2980;InbreedingCoeff=0.1454;MQ=60.72;MQ0=9;MQRankSum=-2.476;QD=6.57;ReadPosRankSum=-0.938;VQSLOD=2.0716;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:23,1:24:9.37:83,0,9	1/1:11,0:11:22.78:120,23,0	0/1:26,1:10:16.82:17,0,48	0/1:22,0:11:3.93:4,0,33	0/1:20,2:21:15.25:55,0,15	0/0:11,0:12:22.60:0,23,140	0/0:20,0:20:34.43:0,34,216	0/1:22,0:23:10.20:38,0,10	0/0:14,0:14:14.28:0,14,96	1/1:21,0:20:23.64:147,24,0	1/1:11,0:14:9.43:89,9,0	0/1:5,19:24:17.06:224,0,17	1/1:5,10:16:32.99:288,33,0	0/0:5,4:8:2.62:0,3,18	1/1:3,11:13:20.92:176,21,0	0/1:4,7:12:5.10:112,0,5	1/1:27,0:27:57.03:296,57,0	1/1:3,16:20:28.57:364,29,0	0/1:12,0:10:3.74:61,0,4	1/1:20,1:20:6.50:76,7,0	1/1:11,0:11:8.22:53,8,0	1/1:6,13:20:20.04:184,20,0	0/1:9,7:16:31.97:108,0,32	1/1:8,22:30:45.02:415,45,0	1/1:15,0:18:24.95:133,25,0	0/1:6,4:10:2.18:35,0,2	0/1:21,0:22:24.19:63,0,24	1/1:12,0:11:6.49:17,6,0
chr10	44050993	.	A	AC	886.32	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=-5.561;DP=515;FS=1.367;HRun=0;HaplotypeScore=85.0382;InbreedingCoeff=0.7588;MQ=64.00;MQ0=7;MQRankSum=2.606;QD=14.53;ReadPosRankSum=6.522;VQSLOD=4.7010;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:45.43:0,45,387	1/1:0,9:10:23.90:277,24,0	0/0:34,1:15:28.21:0,28,246	0/0:22,0:14:24.32:0,24,247	0/0:26,0:25:64.55:0,65,514	0/0:13,0:13:38.99:0,39,437	0/0:19,0:18:54.04:0,54,630	0/0:22,0:22:51.24:0,51,387	0/0:13,0:13:38.96:0,39,401	0/0:16,0:15:40.34:0,40,272	0/0:12,0:12:31.41:0,31,212	0/1:25,0:25:2.95:3,0,173	0/0:16,0:16:13.31:0,13,108	0/0:9,0:8:14.24:0,14,130	0/0:14,0:13:13.87:0,14,83	0/0:14,0:14:20.22:0,20,156	1/1:1,25:26:44.18:729,44,0	0/0:21,0:21:3.79:0,4,98	0/0:17,0:15:40.72:0,41,346	0/0:20,0:20:43.46:0,43,363	0/0:9,0:9:22.19:0,22,148	0/0:18,0:18:23.63:0,24,164	0/0:19,0:18:28.94:0,29,290	0/0:30,0:29:20.69:0,21,118	0/0:12,0:12:29.99:0,30,198	0/0:12,0:12:32.02:0,32,263	0/0:24,0:25:33.37:0,33,460	0/0:16,0:15:38.86:0,39,314
chr10	44050996	.	AAC	A	1778.66	PASS	AB=1.000;AC=20;AF=0.357;AN=56;BaseQRankSum=-2.545;DP=518;FS=11.132;HRun=0;HaplotypeScore=89.2101;InbreedingCoeff=0.6355;MQ=64.40;MQ0=7;MQRankSum=-4.599;QD=8.20;ReadPosRankSum=-9.074;VQSLOD=-0.3392;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:23:5.89:139,0,6	0/0:10,0:10:27.04:0,27,304	0/0:35,0:16:28.61:0,29,299	0/0:22,0:14:29.51:0,30,290	1/1:25,2:26:16.45:248,16,0	0/0:12,0:12:35.30:0,35,452	0/0:19,0:18:50.74:0,51,604	1/1:24,1:25:6.73:272,7,0	0/0:13,0:13:28.78:0,29,444	1/1:18,0:17:7.25:181,7,0	0/1:12,0:12:19.42:62,0,19	0/0:24,0:24:43.60:0,44,464	0/0:15,0:15:42.03:0,42,423	0/0:9,0:8:10.85:0,11,134	0/0:15,0:14:30.03:0,30,308	0/0:14,0:14:24.15:0,24,229	0/0:24,0:24:59.81:0,60,683	0/0:22,0:22:57.04:0,57,544	0/1:17,0:16:39.84:127,0,40	1/1:20,0:20:19.57:191,20,0	1/1:9,0:9:3.32:80,3,0	0/0:18,0:18:43.08:0,43,402	0/0:20,0:19:43.47:0,43,448	0/0:29,0:28:52.94:0,53,521	0/1:12,0:12:32.74:33,0,47	1/1:12,0:12:16.39:209,16,0	1/1:24,2:26:12.08:220,12,0	1/1:16,0:15:30.40:214,30,0
chr10	44050997	.	AC	A	3184.33	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-2.861;DP=509;FS=10.182;HRun=1;HaplotypeScore=76.5364;InbreedingCoeff=0.9838;MQ=65.72;MQ0=5;MQRankSum=-7.291;QD=14.95;ReadPosRankSum=-7.250;VQSLOD=0.2833;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:21,2:23:47.02:310,47,0	0/0:9,0:9:26.92:0,27,214	0/0:34,0:16:23.22:0,23,240	0/0:23,0:15:36.54:0,37,283	1/1:24,3:26:65.46:411,65,0	0/0:12,0:12:35.80:0,36,355	0/0:19,0:18:44.02:0,44,453	1/1:25,0:25:57.44:414,57,0	0/0:13,0:13:30.18:0,30,334	1/1:18,0:17:43.71:308,44,0	1/1:12,0:12:28.77:165,29,0	0/0:25,0:25:45.49:0,45,320	0/0:16,0:16:43.24:0,43,289	0/0:7,0:6:11.98:0,12,104	0/0:15,0:14:29.36:0,29,212	0/0:12,0:12:20.41:0,20,143	0/0:24,0:24:58.81:0,59,471	0/0:22,0:22:55.28:0,55,345	1/1:14,2:16:8.68:221,9,0	1/1:17,3:20:46.65:408,47,0	1/1:8,1:9:22.05:115,22,0	0/0:18,0:18:31.63:0,32,264	0/0:20,0:19:35.14:0,35,332	0/0:27,0:26:58.04:0,58,346	1/1:12,0:12:21.46:122,21,0	1/1:11,0:11:21.03:226,21,0	1/1:25,1:26:62.37:418,62,0	1/1:12,2:14:32.87:293,33,0
chr10	44053046	.	A	AT	3927.53	PASS	AB=0.600;AC=13;AF=0.232;AN=56;BaseQRankSum=-11.744;DP=684;FS=5.419;HRun=11;HaplotypeScore=87.2542;InbreedingCoeff=0.8996;MQ=69.90;MQ0=0;MQRankSum=1.140;QD=21.82;ReadPosRankSum=-1.320;VQSLOD=3.7027;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,32:40:99:1009,102,0	0/0:6,0:6:14.94:0,15,116	0/0:12,0:11:14.87:0,15,111	0/0:15,0:13:17.80:0,18,130	1/1:2,29:31:60.84:772,61,0	0/0:25,0:25:40.41:0,40,462	0/0:25,1:27:23.22:0,23,343	0/0:3,0:37:65.14:0,65,191	0/0:22,0:22:44.77:0,45,345	0/0:2,0:34:63.14:0,63,185	0/0:4,0:23:34.62:0,35,102	0/0:26,1:27:35.24:0,35,451	0/0:23,1:24:38.26:0,38,477	0/0:16,0:16:39.70:0,40,304	0/0:34,0:36:72.75:0,73,545	0/0:21,0:23:57.86:0,58,430	0/0:21,0:21:53.77:0,54,418	0/0:29,1:30:47.25:0,47,550	1/1:7,11:19:12.41:277,12,0	1/1:4,32:36:83.38:788,83,0	1/1:2,19:21:48.10:487,48,0	0/0:30,1:31:53.06:0,53,581	0/0:27,2:29:43.30:0,43,522	0/0:24,1:25:29.25:0,29,405	0/0:1,0:20:30.55:0,31,90	1/1:4,20:24:30.87:495,31,0	0/0:20,0:21:43.83:0,44,331	0/1:3,6:9:8.22:100,0,8
chr10	44055018	.	T	TGAGAGAGA	7793.85	PASS	AB=0.916;AC=46;AF=0.920;AN=50;BaseQRankSum=-0.481;DP=645;FS=17.760;HRun=0;HaplotypeScore=209.6888;InbreedingCoeff=-0.0436;MQ=57.31;MQ0=7;MQRankSum=-3.519;QD=14.33;ReadPosRankSum=-2.239;VQSLOD=1.7617;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:22:6.99:181,7,0	0/1:9,0:11:80.11:133,0,80	./.	./.	1/1:39,0:39:11.88:301,12,0	1/1:28,0:31:17.66:234,18,0	1/1:17,0:23:11.79:134,12,0	1/1:31,0:31:30.53:771,31,0	1/1:14,0:16:15.52:338,16,0	1/1:21,0:21:24.08:759,24,0	1/1:20,0:20:3.13:44,3,0	1/1:21,3:25:22.42:544,22,0	1/1:22,4:30:49.97:1309,50,0	1/1:14,6:21:15.99:458,16,0	1/1:19,0:20:9.03:214,9,0	0/1:21,4:27:50.50:501,0,50	0/1:23,0:24:33.63:34,0,549	1/1:17,0:17:3.90:115,4,0	1/1:16,0:15:11.63:293,12,0	1/1:15,0:14:6.95:149,7,0	./.	1/1:19,0:21:2.72:24,3,0	1/1:29,1:31:11.76:196,12,0	1/1:9,0:9:3.01:122,3,0	0/1:25,0:24:0:1,0,0	1/1:20,0:19:15.05:411,15,0	1/1:24,0:22:17.75:422,18,0	1/1:3,0:2:3.01:104,3,0
chr10	44055096	.	AT	A	5475.08	PASS	AB=0.663;AC=40;AF=0.714;AN=56;BaseQRankSum=5.628;DP=490;FS=4.265;HRun=13;HaplotypeScore=72.4646;InbreedingCoeff=0.5505;MQ=75.27;MQ0=1;MQRankSum=-0.572;QD=13.76;ReadPosRankSum=4.780;VQSLOD=5.4059;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,12:13:29.80:219,30,0	1/1:4,4:9:13.94:93,14,0	0/0:14,0:13:6.04:0,6,80	0/1:16,0:14:4.48:4,0,93	0/1:7,15:25:6.49:232,0,6	1/1:2,22:24:62.63:460,63,0	1/1:0,14:15:37.83:269,38,0	0/0:24,0:24:60.06:0,60,565	1/1:4,15:19:38.75:282,39,0	0/0:26,1:27:40.21:0,40,528	0/0:17,0:17:27.42:0,27,335	1/1:3,10:13:26.83:197,27,0	0/1:4,10:14:2.47:141,0,2	1/1:0,15:16:40.82:290,41,0	1/1:3,16:20:34.79:247,35,0	0/1:2,12:15:0.46:148,0,0	1/1:1,18:19:47.68:346,48,0	1/1:4,16:20:18.55:299,19,0	1/1:7,13:22:41.08:276,41,0	0/1:4,13:18:10.32:219,0,10	1/1:0,9:9:17.88:131,18,0	1/1:3,18:21:18.45:295,18,0	0/1:12,6:20:36.59:134,0,37	1/1:1,10:12:25.89:181,26,0	0/0:9,0:9:17.96:0,18,160	1/1:3,24:29:49.38:501,49,0	1/1:0,19:20:46.78:334,47,0	1/1:1,8:9:23.86:175,24,0
chr10	44057501	.	GTC	G	1868.50	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=5.701;DP=603;FS=10.548;HRun=0;HaplotypeScore=83.5150;InbreedingCoeff=0.8409;MQ=72.67;MQ0=21;MQRankSum=0.954;QD=9.11;ReadPosRankSum=-0.412;VQSLOD=2.3490;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:79.87:0,80,622	0/0:6,0:6:9:0,9,94	0/0:77,0:32:77:0,77,779	0/0:81,0:36:85.10:0,85,923	1/1:10,0:10:3:27,3,0	0/0:24,0:23:51.05:0,51,429	0/0:27,0:27:44.06:0,44,433	1/1:3,0:17:32.89:258,33,0	0/0:12,0:12:18.49:0,18,187	1/1:11,0:11:20.98:175,21,0	1/1:7,0:7:17.66:135,18,0	1/1:13,0:13:23.63:180,24,0	1/1:13,0:14:10.85:251,11,0	1/1:5,13:18:9.01:103,9,0	1/1:13,0:13:13.26:230,13,0	1/1:17,1:18:9.43:95,9,0	0/0:34,0:34:68.71:0,69,624	1/1:14,0:14:9:82,9,0	0/0:11,0:11:0.29:0,0,193	0/0:12,0:12:16.03:0,16,193	0/0:27,0:25:59.74:0,60,490	1/1:2,12:14:2.62:24,3,0	1/1:15,0:15:44.79:371,45,0	1/1:4,37:40:12.03:145,12,0	0/0:9,0:9:0:0,0,0	0/0:14,0:14:36.05:0,36,343	0/0:16,0:16:37.15:0,37,280	0/0:7,0:7:14.98:0,15,125
chr10	44057508	.	TCTCA	T	1974.15	PASS	AB=0.974;AC=23;AF=0.411;AN=56;BaseQRankSum=4.945;DP=649;FS=10.431;HRun=0;HaplotypeScore=107.5810;InbreedingCoeff=0.3930;MQ=69.04;MQ0=22;MQRankSum=-0.147;QD=7.59;ReadPosRankSum=-0.602;VQSLOD=1.9218;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:58.30:0,58,590	0/0:7,0:7:9:0,9,120	0/0:75,0:30:77:0,77,779	0/0:79,0:34:85.08:0,85,925	1/1:0,11:11:3.01:59,3,0	0/0:25,0:24:33.86:0,34,456	0/0:32,0:32:59.33:0,59,508	1/1:18,0:18:32.85:258,33,0	0/0:13,0:13:26.91:0,27,214	1/1:1,0:15:27.85:216,28,0	1/1:10,0:10:17.66:135,18,0	1/1:11,0:11:23.47:180,23,0	0/1:18,1:19:34.77:222,0,35	0/0:16,0:16:6.30:0,6,26	0/1:16,0:17:3.84:324,0,4	1/1:6,13:19:5.51:132,6,0	0/0:38,0:38:81.63:0,82,860	1/1:0,17:17:9.03:177,9,0	0/1:12,0:12:15.47:15,0,189	0/0:13,0:13:16.03:0,16,193	0/0:28,0:25:29.20:0,29,440	1/1:18,0:18:2.69:25,3,0	0/1:17,1:18:14.04:315,0,14	0/1:46,1:46:80.30:86,0,80	0/0:0,0:9:0:0,0,0	0/0:14,0:14:0.71:0,1,301	0/1:22,0:21:9.57:10,0,227	0/1:6,0:6:1.32:1,0,107
chr10	44057510	.	TCACA	T	775.84	PASS	AB=0.967;AC=23;AF=0.500;AN=46;BaseQRankSum=0.064;DP=651;FS=0.000;HRun=0;HaplotypeScore=112.5988;InbreedingCoeff=0.0700;MQ=66.61;MQ0=22;MQRankSum=-0.160;QD=2.49;ReadPosRankSum=0.428;VQSLOD=1.8716;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:33,9:41:39.59:40,0,40	0/0:7,0:7:3.01:0,3,56	./.	./.	1/1:11,0:11:3.01:34,3,0	0/1:25,0:24:33.53:34,0,97	0/0:26,0:32:8.48:0,8,48	0/0:19,0:19:2.97:0,3,20	0/0:9,0:12:2.60:0,3,10	1/1:15,0:15:12.34:114,12,0	./.	0/0:11,0:11:0:0,0,1	0/1:19,0:19:33.93:34,0,107	0/0:14,0:15:8.73:0,9,63	0/1:18,0:18:58.84:62,0,59	0/1:17,1:18:17.81:91,0,18	0/0:40,0:41:31.04:0,31,558	1/1:17,0:17:9.03:106,9,0	1/1:11,0:11:3.01:42,3,0	./.	1/1:28,0:25:6.02:83,6,0	./.	0/1:18,0:18:56.11:56,0,138	0/1:47,0:46:5.50:5,0,252	0/0:10,0:10:0:0,0,0	1/1:16,0:16:2.38:78,2,0	1/1:11,9:19:4.98:91,5,0	1/1:6,0:6:3.01:44,3,0
chr10	44060308	.	AACACACAC	A	791.30	PASS	AB=0.888;AC=12;AF=0.240;AN=50;BaseQRankSum=4.429;DP=574;FS=1.868;HRun=0;HaplotypeScore=137.6367;InbreedingCoeff=0.2699;MQ=72.75;MQ0=20;MQRankSum=-3.985;QD=5.35;ReadPosRankSum=0.843;VQSLOD=2.5933;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:38:35.38:0,35,1075	0/0:10,0:10:12.04:0,12,431	./.	./.	0/0:20,0:20:18.06:0,18,591	0/0:17,0:15:30.09:0,30,950	0/0:23,0:20:27.39:0,27,792	./.	0/0:19,0:21:30.06:0,30,957	0/0:16,0:16:9.81:0,10,80	0/1:18,0:18:29.82:30,0,41	0/1:9,2:12:9.87:10,0,19	0/1:9,1:14:14.86:81,0,15	0/1:9,1:10:35.71:68,0,36	1/1:6,10:17:11.25:212,11,0	1/1:9,1:14:8.60:186,9,0	0/0:23,0:26:8.33:0,8,408	0/0:8,0:8:8.31:0,8,128	0/0:12,0:11:7.38:0,7,241	0/0:29,0:29:23.83:0,24,825	0/0:18,0:17:12.04:0,12,400	0/1:19,2:22:40.04:170,0,40	0/0:15,0:15:1.82:0,2,5	0/1:19,0:19:9.31:9,0,18	1/1:14,1:22:14.72:178,15,0	0/0:19,0:18:30.10:0,30,896	0/0:13,0:22:21.07:0,21,696	0/0:14,0:14:10.85:0,11,232
chr10	44061563	.	GC	G	3402.14	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=10.027;DP=520;FS=1.428;HRun=1;HaplotypeScore=49.6262;InbreedingCoeff=0.9516;MQ=85.62;MQ0=0;MQRankSum=1.048;QD=39.56;ReadPosRankSum=-0.762;VQSLOD=3.7097;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:33.11:0,33,527	0/0:7,0:6:21.06:0,21,309	0/0:21,0:21:63.16:0,63,962	0/0:12,0:12:33.11:0,33,494	0/0:33,0:33:99:0,99,1533	0/0:22,0:22:63.21:0,63,1007	0/0:14,0:14:42.13:0,42,648	1/1:0,28:28:81.24:1096,81,0	0/0:23,0:23:69.24:0,69,1103	1/1:0,17:17:51.17:712,51,0	1/1:0,24:24:66.22:923,66,0	0/0:18,0:18:54.18:0,54,863	0/0:19,0:19:57.19:0,57,908	0/0:13,0:13:39.13:0,39,623	0/0:20,0:20:60.20:0,60,959	0/0:19,0:19:57.19:0,57,911	0/0:23,0:23:59.73:0,60,957	0/0:10,0:10:30.10:0,30,478	0/0:18,0:18:54.18:0,54,854	0/0:31,0:31:93.30:0,93,1463	0/0:18,0:18:54.18:0,54,863	0/0:17,0:17:51.04:0,51,780	0/0:12,0:12:36.12:0,36,575	0/0:1,0:1:3.01:0,3,48	1/1:0,17:17:48.16:671,48,0	0/0:28,1:29:45.31:0,45,1258	0/0:28,0:28:84.27:0,84,1320	0/0:14,0:14:42.14:0,42,671
chr10	44065156	.	A	AGGGGAG	1992.92	PASS	AB=0.983;AC=11;AF=0.196;AN=56;BaseQRankSum=-5.451;DP=513;FS=45.478;HRun=0;HaplotypeScore=100.8209;InbreedingCoeff=0.5936;MQ=53.46;MQ0=16;MQRankSum=-7.762;QD=16.47;ReadPosRankSum=-2.495;VQSLOD=0.7743;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:30:36.82:37,0,1449	0/0:13,0:13:24.05:0,24,486	0/1:17,0:6:5.97:6,0,124	0/0:22,0:8:3.53:0,4,293	0/0:19,0:19:48.16:0,48,1062	0/0:18,0:17:36.12:0,36,754	0/0:21,0:21:51.17:0,51,1126	1/1:6,9:16:39.06:1172,39,0	0/0:13,0:13:27.06:0,27,502	1/1:3,4:6:12.04:411,12,0	1/1:1,8:8:5.68:203,6,0	0/1:21,0:21:15.14:15,0,760	0/0:20,0:19:42.13:0,42,840	0/0:25,0:25:57.19:0,57,1214	0/0:15,0:15:33.11:0,33,705	0/0:20,0:20:48.16:0,48,1062	0/0:20,0:20:42.14:0,42,927	0/0:15,0:15:24.08:0,24,523	0/0:13,0:9:21.07:0,21,464	0/0:22,0:22:57.14:0,57,1173	0/0:21,0:21:57.18:0,57,1219	0/0:14,0:14:36.12:0,36,754	0/0:19,0:18:48.16:0,48,1002	0/0:34,0:34:84.26:0,84,1807	1/1:0,11:11:9.03:308,9,0	0/0:18,0:18:51.17:0,51,1086	0/0:25,0:25:47.78:0,48,1061	0/0:5,0:5:12.04:0,12,265
chr10	44066212	.	G	GCACACACACA	4062.03	PASS	AB=0.833;AC=24;AF=0.480;AN=50;BaseQRankSum=2.798;DP=530;FS=15.373;HRun=0;HaplotypeScore=176.1143;InbreedingCoeff=0.6053;MQ=58.64;MQ0=3;MQRankSum=-5.068;QD=14.82;ReadPosRankSum=-2.636;VQSLOD=1.2912;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:28:13.74:226,14,0	1/1:7,0:7:12.04:304,12,0	./.	./.	./.	0/0:18,0:18:16.39:0,16,500	0/0:23,0:24:14.16:0,14,425	1/1:31,0:30:13.77:145,14,0	0/0:10,0:11:18.03:0,18,447	0/0:13,0:15:21.05:0,21,390	0/0:17,0:17:29.37:0,29,740	0/0:8,0:9:18.03:0,18,297	0/0:14,0:16:4.55:0,5,367	0/0:11,0:12:18.02:0,18,322	0/1:14,0:28:37.13:41,0,37	0/1:14,0:19:59.50:174,0,59	1/1:23,0:23:24.42:516,24,0	0/1:12,0:14:25.71:168,0,26	1/1:16,0:16:21.05:466,21,0	1/1:9,1:17:2.90:49,3,0	1/1:21,0:21:12.23:282,12,0	0/0:17,0:19:24.08:0,24,470	0/1:11,0:15:4.90:5,0,235	0/0:41,0:41:48.16:0,48,1318	0/0:13,0:14:25.31:0,25,485	1/1:15,7:22:30.95:964,31,0	1/1:15,1:17:15.05:550,15,0	1/1:12,2:15:6:173,6,0
chr10	44066579	.	AT	A	5586.41	PASS	AB=0.846;AC=25;AF=0.446;AN=56;BaseQRankSum=12.140;DP=518;FS=3.520;HRun=8;HaplotypeScore=50.9192;InbreedingCoeff=0.9202;MQ=71.44;MQ0=0;MQRankSum=0.117;QD=23.28;ReadPosRankSum=0.022;VQSLOD=5.3309;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,28:29:78.12:753,78,0	0/0:11,0:11:30.08:0,30,350	0/1:9,2:11:15.61:16,0,250	0/0:12,0:11:21.06:0,21,245	1/1:1,24:25:63.10:608,63,0	0/0:21,0:21:57.17:0,57,679	0/0:23,0:24:60.03:0,60,681	1/1:5,30:35:90.09:851,90,0	0/0:13,0:13:39.06:0,39,431	1/1:1,14:15:42:389,42,0	1/1:1,17:18:48.07:464,48,0	0/0:17,0:17:45.13:0,45,534	0/0:22,0:22:61.43:0,61,727	0/0:16,0:16:45.14:0,45,542	0/0:24,0:24:69.20:0,69,821	0/0:12,0:12:30.09:0,30,362	0/0:26,0:26:54.17:0,54,652	0/0:21,1:22:34.17:0,34,666	1/1:2,14:16:42.04:398,42,0	1/1:0,15:15:39.06:377,39,0	1/1:5,4:9:12.01:116,12,0	0/0:24,0:24:63.19:0,63,751	0/0:23,0:23:66.16:0,66,781	0/0:11,0:11:33.09:0,33,388	1/1:2,17:19:45.07:435,45,0	1/1:0,19:19:57.08:544,57,0	1/1:3,21:24:54.08:521,54,0	1/1:0,5:5:12.02:116,12,0
chr10	44068216	.	ATT	A	2634.30	PASS	AB=0.635;AC=26;AF=0.464;AN=56;BaseQRankSum=7.111;DP=589;FS=25.305;HRun=16;HaplotypeScore=86.9717;InbreedingCoeff=0.7134;MQ=64.06;MQ0=4;MQRankSum=-1.761;QD=8.23;ReadPosRankSum=5.306;VQSLOD=0.0582;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,22:28:46.01:440,46,0	1/1:1,0:15:29.56:125,30,0	0/0:21,0:10:23.24:0,23,205	0/0:20,0:9:8.96:0,9,97	1/1:8,12:26:17.45:214,17,0	0/0:16,1:24:27.72:0,28,492	0/0:14,0:19:28.94:0,29,242	1/1:14,12:28:17.30:188,17,0	0/0:21,0:21:43.81:0,44,409	1/1:7,13:22:41.15:316,41,0	1/1:8,11:22:22.96:215,23,0	0/0:21,0:21:50.99:0,51,532	0/0:15,1:23:19.90:0,20,390	0/0:20,0:20:38.94:0,39,353	0/0:17,0:18:42.05:0,42,434	0/0:14,0:19:38.43:0,38,346	1/1:6,0:24:41.57:175,42,0	0/0:9,0:15:26.38:0,26,242	0/1:11,9:21:3.50:154,0,3	1/1:9,11:22:28.98:224,29,0	0/1:7,12:19:36.57:168,0,37	0/0:23,0:24:43.18:0,43,613	0/1:7,1:14:0.63:1,0,106	0/0:12,0:23:36.93:0,37,211	0/1:6,13:21:31.32:199,0,31	1/1:8,11:20:7.23:164,7,0	1/1:13,14:28:2.63:162,3,0	1/1:4,5:9:11.85:100,12,0
chr10	44068812	.	CT	C	1333.35	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=6.478;DP=562;FS=6.238;HRun=11;HaplotypeScore=59.0851;InbreedingCoeff=0.8399;MQ=58.68;MQ0=26;MQRankSum=-0.877;QD=12.01;ReadPosRankSum=-1.784;VQSLOD=2.7062;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:34:64.11:0,64,641	0/0:8,0:8:18.05:0,18,192	0/1:19,0:6:0.73:1,0,5	0/0:12,0:6:5.12:0,5,20	0/0:23,2:25:13.84:0,14,543	0/0:25,0:25:53.91:0,54,532	0/0:24,1:25:29.28:0,29,481	1/1:8,20:26:45.08:427,45,0	0/0:13,1:14:11.71:0,12,326	1/1:7,16:22:44.90:369,45,0	1/1:3,15:18:32.95:271,33,0	0/0:15,0:16:44.93:0,45,453	0/0:24,1:24:35.39:0,35,580	0/0:20,0:19:45.08:0,45,464	0/0:16,0:15:36.04:0,36,364	0/0:16,0:16:33.08:0,33,350	0/0:29,1:32:55.77:0,56,725	0/0:22,0:21:56.34:0,56,573	0/0:12,0:10:20.85:0,21,194	0/0:20,0:20:43.07:0,43,518	0/0:5,0:4:6.02:0,6,64	0/0:19,1:20:20.45:0,20,409	0/0:21,0:21:51.03:0,51,518	0/0:24,0:24:5.51:0,6,259	1/1:1,20:22:52.97:424,53,0	0/0:20,0:19:48.12:0,48,512	0/0:20,0:20:48.10:0,48,502	0/0:11,0:10:18.05:0,18,192
chr10	44070998	.	AACACACACACAC	A	12486.25	PASS	AB=0.731;AC=35;AF=0.648;AN=54;BaseQRankSum=6.682;DP=657;FS=0.000;HRun=0;HaplotypeScore=238.9062;InbreedingCoeff=0.5406;MQ=50.14;MQ0=16;MQRankSum=-9.052;QD=26.62;ReadPosRankSum=-0.769;VQSLOD=3.4743;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:18,9:29:13.76:420,14,0	1/1:3,7:11:21.07:708,21,0	./.	0/0:18,0:5:3.01:0,3,92	1/1:19,13:33:24.08:831,24,0	0/0:26,0:27:54.19:0,54,2927	0/0:25,0:28:39.13:0,39,1688	1/1:17,5:21:15.05:272,15,0	0/0:14,0:16:33.11:0,33,1530	1/1:19,13:33:48:1341,48,0	1/1:10,6:18:24.04:707,24,0	1/1:13,2:22:27.09:554,27,0	0/1:15,1:24:36.11:380,0,36	0/1:15,3:24:6.73:626,0,7	0/0:12,0:35:55.11:0,55,1429	0/0:10,0:22:33.58:0,34,864	1/1:13,6:19:7.63:309,8,0	0/0:17,0:27:38.16:0,38,1056	0/1:9,1:10:0.93:99,0,1	1/1:17,19:36:54.11:1706,54,0	1/1:17,4:21:3.01:104,3,0	0/1:14,0:31:10.62:521,0,11	0/1:14,1:27:72.33:418,0,72	1/1:11,0:17:5.06:86,5,0	1/1:8,10:18:20.74:707,21,0	1/1:14,12:29:30.04:1078,30,0	1/1:11,16:28:21.18:1412,21,0	1/1:9,2:11:6.02:208,6,0
chr10	44071465	.	G	GGTGT	2651.13	PASS	AB=0.864;AC=39;AF=0.750;AN=52;BaseQRankSum=0.074;DP=714;FS=0.766;HRun=0;HaplotypeScore=167.2051;InbreedingCoeff=-0.0125;MQ=64.04;MQ0=12;MQRankSum=-0.278;QD=4.38;ReadPosRankSum=1.382;VQSLOD=2.7783;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:31:16.62:17,0,69	1/1:4,4:8:3.01:71,3,0	./.	./.	0/1:18,0:21:24.32:24,0,37	0/1:30,0:31:57.18:57,0,249	0/0:25,0:28:14.90:0,15,173	0/1:31,0:31:14.85:20,0,15	0/0:24,0:25:21.06:0,21,307	1/1:27,4:34:9.74:328,10,0	1/1:18,5:24:5.61:80,6,0	1/1:26,0:26:18.03:317,18,0	1/1:14,0:14:4.66:95,5,0	0/1:25,0:25:3.72:170,0,4	1/1:15,1:31:11.24:107,11,0	1/1:14,2:26:19.85:240,20,0	1/1:17,11:30:10.12:225,10,0	1/1:14,0:14:5.99:61,6,0	0/1:17,3:21:13.94:99,0,14	1/1:13,0:19:5.26:50,5,0	1/1:28,0:34:8.23:37,8,0	1/1:22,0:22:9.03:181,9,0	1/1:23,0:27:7.54:111,8,0	1/1:30,0:30:6.02:90,6,0	1/1:12,12:29:9.03:212,9,0	0/1:22,0:31:6.04:143,0,6	0/1:21,0:29:32.91:33,0,54	0/1:5,0:9:37.82:38,0,38
chr10	44074155	.	A	AATAC	5765.89	PASS	AB=0.690;AC=14;AF=0.269;AN=52;BaseQRankSum=-10.383;DP=792;FS=9.449;HRun=0;HaplotypeScore=128.5773;InbreedingCoeff=0.6234;MQ=66.05;MQ0=1;MQRankSum=0.985;QD=22.52;ReadPosRankSum=-3.457;VQSLOD=3.1947;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:25,15:40:15.33:621,15,0	1/1:1,8:9:15.05:354,15,0	./.	./.	1/1:19,22:41:13.38:1269,13,0	0/0:24,0:24:41.70:0,42,678	0/0:19,0:19:22.22:0,22,436	0/0:44,0:44:30.10:0,30,451	0/0:30,0:30:57.18:0,57,860	0/0:29,0:29:51.17:0,51,789	0/0:25,0:25:45.14:0,45,677	0/0:25,0:25:33.11:0,33,514	0/0:26,0:26:45.12:0,45,676	0/0:23,0:23:42.14:0,42,649	0/0:41,0:41:78.26:0,78,1209	0/0:36,0:36:69.23:0,69,1077	0/0:25,0:25:36.12:0,36,562	0/0:19,0:19:33.09:0,33,482	0/1:18,5:23:28.77:313,0,29	0/1:15,21:38:4.68:878,0,5	1/1:14,18:34:33.11:779,33,0	0/0:33,0:33:42.14:0,42,655	0/0:33,0:33:48.16:0,48,749	0/0:29,0:29:25.30:0,25,696	0/0:35,0:35:66.20:0,66,986	0/1:12,12:25:7.19:808,0,7	0/1:13,11:27:16.72:604,0,17	1/1:11,4:19:6.02:139,6,0
chr10	44076506	.	CG	C	3560.97	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=13.475;DP=731;FS=2.303;HRun=4;HaplotypeScore=75.7788;InbreedingCoeff=0.9976;MQ=82.22;MQ0=0;MQRankSum=-5.173;QD=32.37;ReadPosRankSum=-0.421;VQSLOD=3.9651;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,120,1629	0/0:8,0:8:18.05:0,18,237	0/0:25,0:25:63.19:0,63,860	0/0:27,0:26:60.11:0,60,794	0/0:37,0:37:99:0,108,1454	0/0:26,0:26:72.20:0,72,980	0/0:22,0:22:66.21:0,66,907	1/1:2,32:34:90.27:1079,90,0	0/0:20,0:20:57.19:0,57,798	1/1:3,27:30:78.24:935,78,0	1/1:0,24:24:69.21:827,69,0	0/0:31,0:31:93.28:0,93,1267	0/0:27,0:27:75.21:0,75,1000	0/0:22,0:22:63.20:0,63,859	0/0:40,0:40:99:0,117,1618	0/0:30,0:30:87.28:0,87,1199	0/0:21,0:21:57.19:0,57,797	0/0:22,0:22:60.18:0,60,821	0/0:21,0:21:54.18:0,54,752	0/0:30,0:30:90.29:0,90,1241	0/0:36,0:36:99:0,105,1433	0/0:25,0:25:69.22:0,69,946	0/0:27,0:27:81.23:0,81,1080	0/0:17,0:17:51.14:0,51,679	1/1:0,22:22:60.18:720,60,0	0/0:28,0:28:45.26:0,45,1054	0/0:28,0:28:84.26:0,84,1157	0/0:11,0:11:30.10:0,30,420
chr10	44076957	.	A	AAT	3031.51	PASS	AB=0.938;AC=9;AF=0.161;AN=56;BaseQRankSum=6.482;DP=509;FS=3.756;HRun=0;HaplotypeScore=62.0999;InbreedingCoeff=0.8571;MQ=71.20;MQ0=0;MQRankSum=0.175;QD=28.87;ReadPosRankSum=-0.576;VQSLOD=4.7232;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:81.24:0,81,1033	0/0:18,0:18:51.15:0,51,643	0/0:11,0:11:17.86:0,18,190	0/0:7,0:6:14.68:0,15,150	0/0:24,0:24:63.20:0,63,824	0/0:25,0:25:66.21:0,66,852	0/0:20,0:20:57.17:0,57,721	1/1:12,23:35:69.22:1139,69,0	0/0:13,0:13:36.11:0,36,459	1/1:3,20:23:60.18:961,60,0	1/1:5,5:11:17.98:273,18,0	0/0:11,0:11:27.08:0,27,341	0/0:18,0:18:45.13:0,45,562	0/0:13,0:13:33.08:0,33,403	0/0:8,0:8:24.08:0,24,314	0/0:23,0:23:63.20:0,63,825	0/0:41,0:41:99:0,102,1272	0/0:24,0:24:66.20:0,66,851	0/0:28,0:28:69.16:0,69,868	0/0:19,0:19:51.16:0,51,655	0/0:9,0:9:27.07:0,27,338	0/0:6,0:6:12.04:0,12,157	0/0:11,0:11:27.07:0,27,339	0/0:7,0:7:21.02:0,21,243	1/1:5,15:21:48.16:810,48,0	0/1:14,1:15:12.13:12,0,420	0/0:27,0:26:66.20:0,66,839	0/0:12,0:12:36.10:0,36,456
chr10	44077573	.	G	GA	2181.73	PASS	AB=0.938;AC=9;AF=0.161;AN=56;BaseQRankSum=-7.873;DP=527;FS=1.050;HRun=9;HaplotypeScore=52.4729;InbreedingCoeff=0.9075;MQ=73.15;MQ0=0;MQRankSum=1.305;QD=19.83;ReadPosRankSum=-3.558;VQSLOD=2.5613;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:65.97:0,66,569	0/0:13,0:13:38.97:0,39,333	0/0:27,0:22:12.73:0,13,237	0/0:13,0:9:11.99:0,12,105	0/1:14,1:15:0.21:0,0,227	0/0:29,0:29:68.98:0,69,599	0/0:21,2:23:26.78:0,27,457	1/1:8,23:32:70.02:742,70,0	0/0:20,0:20:50.98:0,51,440	1/1:0,22:22:60.14:648,60,0	1/1:5,13:18:16.05:392,16,0	0/0:15,0:15:41.99:0,42,365	0/0:15,0:15:41.99:0,42,365	0/0:19,1:20:17.81:0,18,383	0/0:8,0:8:24:0,24,208	0/0:19,0:19:50.97:0,51,439	0/0:19,0:19:53.99:0,54,469	0/0:15,0:15:35.96:0,36,308	0/0:9,0:9:23.99:0,24,208	0/0:17,0:17:44.97:0,45,387	0/0:15,0:15:35.28:0,35,332	0/0:20,0:20:50.98:0,51,441	0/0:18,0:17:41.98:0,42,364	0/0:12,0:12:32.96:0,33,281	1/1:3,20:22:51.10:558,51,0	0/0:23,0:23:65.98:0,66,570	0/0:27,0:26:65.91:0,66,563	0/0:15,0:15:32.98:0,33,286
chr10	44077795	.	CA	C	1190.03	PASS	AB=0.687;AC=24;AF=0.480;AN=50;BaseQRankSum=-4.876;DP=309;FS=25.120;HRun=10;HaplotypeScore=77.9916;InbreedingCoeff=0.4452;MQ=37.81;MQ0=15;MQRankSum=0.748;QD=7.30;ReadPosRankSum=3.443;VQSLOD=0.3979;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:14,4:11:13.85:40,0,14	1/1:4,1:5:2.50:25,2,0	./.	./.	0/1:8,4:11:32.70:60,0,33	0/0:15,0:13:24.06:0,24,265	0/0:18,0:16:21.24:0,21,209	0/0:7,0:12:16.75:0,17,87	0/0:11,0:13:15:0,15,153	0/0:16,0:21:34.25:0,34,188	0/0:4,0:14:23.89:0,24,127	0/1:3,10:13:2.77:110,0,3	1/1:4,3:7:9:78,9,0	0/0:2,2:4:2.22:0,2,7	1/1:4,9:10:19.28:179,19,0	1/1:4,8:11:9.12:170,9,0	0/0:17,0:10:13.39:0,13,135	0/1:8,5:7:5.01:19,0,5	0/0:8,0:5:3.27:0,3,14	0/1:6,8:14:1.07:154,0,1	1/1:2,1:3:5.97:48,6,0	1/1:3,3:5:9:78,9,0	1/1:6,4:9:8.99:78,9,0	./.	0/0:6,0:13:20.19:0,20,133	1/1:7,10:13:6.28:185,6,0	0/1:5,7:11:10.23:84,0,10	1/1:6,1:7:8.67:54,9,0
chr10	44077805	.	AGAACC	A	1125.77	PASS	AB=0.940;AC=21;AF=0.389;AN=54;BaseQRankSum=0.709;DP=307;FS=8.437;HRun=0;HaplotypeScore=59.3437;InbreedingCoeff=-0.3424;MQ=39.67;MQ0=20;MQRankSum=-1.585;QD=5.21;ReadPosRankSum=-2.525;VQSLOD=-0.6364;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:16,0:10:38.90:107,0,39	1/1:4,0:4:5.38:47,5,0	1/1:2,0:1:0.89:2,1,0	0/0:4,0:2:1.44:0,1,34	0/1:12,0:11:99:132,0,132	0/0:17,0:15:35.81:0,36,605	0/0:18,0:15:8.89:0,9,558	0/1:10,0:10:49.91:50,0,106	0/0:11,0:11:24.03:0,24,393	0/1:19,0:15:37.26:37,0,154	0/1:13,0:13:7.56:8,0,131	0/1:14,0:14:17.04:17,0,270	0/1:4,5:9:40.96:41,0,170	1/1:4,0:4:1.22:52,1,0	0/1:15,0:12:86.46:86,0,328	0/1:13,0:12:31.34:31,0,329	0/1:16,0:10:26.69:27,0,293	0/1:15,1:10:79.96:227,0,80	0/1:6,1:4:10.70:11,0,40	0/1:14,2:16:99:128,0,199	0/0:4,0:3:8.81:0,9,59	0/0:5,0:4:9.02:0,9,112	0/0:7,0:5:3.44:0,3,104	./.	0/1:13,2:14:57.80:160,0,58	0/0:14,0:10:6.93:0,7,279	0/1:13,1:13:99:113,0,143	0/0:3,1:7:8.30:0,8,65
chr10	44077954	.	A	AC	2743.66	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=2.818;DP=423;FS=0.000;HRun=0;HaplotypeScore=51.8588;InbreedingCoeff=0.9382;MQ=55.75;MQ0=6;MQRankSum=-0.477;QD=35.18;ReadPosRankSum=-0.836;VQSLOD=2.7282;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:75.25:0,75,1049	0/0:6,0:6:15.05:0,15,210	0/0:21,0:11:25.63:0,26,322	0/0:12,0:4:12.03:0,12,155	0/0:19,0:19:57.18:0,57,779	0/0:15,0:15:45.14:0,45,612	0/0:15,0:15:45.14:0,45,608	1/1:0,25:22:66.20:1007,66,0	0/0:15,0:15:42.14:0,42,587	1/1:4,20:24:57.66:890,58,0	1/1:1,13:14:27.09:431,27,0	0/0:9,0:9:27.09:0,27,377	0/0:9,0:8:21.07:0,21,290	0/0:7,0:7:18.06:0,18,252	0/0:22,0:22:57.16:0,57,761	0/0:11,0:11:30.10:0,30,419	0/0:36,0:36:99:0,105,1447	0/0:31,1:32:36.44:0,36,1081	0/0:18,0:17:51.16:0,51,698	0/0:10,0:10:30.10:0,30,420	0/0:9,0:9:24.05:0,24,301	0/0:3,0:3:9.03:0,9,126	0/0:8,0:8:24.08:0,24,336	0/0:12,0:12:36.12:0,36,503	1/1:0,15:14:36.12:575,36,0	0/0:10,0:9:27.09:0,27,376	0/0:15,0:14:42.14:0,42,587	0/0:2,0:2:6.02:0,6,84
chr10	44078015	.	CA	C	2644.04	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=13.149;DP=525;FS=0.436;HRun=7;HaplotypeScore=66.2084;InbreedingCoeff=0.9924;MQ=63.32;MQ0=0;MQRankSum=-3.578;QD=24.71;ReadPosRankSum=-1.862;VQSLOD=3.3186;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:54.17:0,54,679	0/0:8,0:8:24.08:0,24,302	0/0:16,0:14:39.41:0,39,443	0/0:9,0:8:15.05:0,15,189	0/0:20,0:20:57.18:0,57,717	0/0:16,0:16:48.14:0,48,591	0/0:21,0:21:60.18:0,60,742	1/1:5,18:23:63.14:638,63,0	0/0:18,0:18:51.09:0,51,618	1/1:3,28:31:84.18:853,84,0	1/1:1,24:25:60.12:612,60,0	0/0:17,0:17:45.14:0,45,566	0/0:17,0:17:48.11:0,48,586	0/0:15,0:15:39.12:0,39,491	0/0:26,0:26:72.23:0,72,900	0/0:18,0:17:51.15:0,51,630	0/0:28,0:28:72.18:0,72,866	0/0:27,0:27:73.92:0,74,920	0/0:31,0:31:87.28:0,87,1089	0/0:8,0:8:21.07:0,21,264	0/0:15,0:15:45.13:0,45,553	0/0:7,0:7:21.07:0,21,264	0/0:10,0:10:30.10:0,30,377	0/0:10,0:10:30.08:0,30,364	1/1:1,27:28:69.16:702,69,0	0/0:19,0:18:51.16:0,51,642	0/0:25,0:24:69.22:0,69,866	0/0:14,0:14:42.13:0,42,528
chr10	44080121	.	A	AC	2897.61	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=13.472;DP=598;FS=1.984;HRun=5;HaplotypeScore=74.6854;InbreedingCoeff=0.9953;MQ=95.28;MQ0=0;MQRankSum=-3.174;QD=30.18;ReadPosRankSum=-0.922;VQSLOD=3.8657;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:69.12:0,69,721	0/0:5,0:5:15.04:0,15,161	0/0:35,0:35:76.25:0,76,856	0/0:23,0:23:50.20:0,50,550	0/0:25,0:25:69.17:0,69,735	0/0:29,0:29:81.18:0,81,861	0/0:29,0:29:66.12:0,66,689	1/1:5,24:29:63.06:753,63,0	0/0:20,0:20:60.10:0,60,615	1/1:3,27:30:84.12:1046,84,0	1/1:0,21:21:60.19:785,60,0	0/0:21,0:21:60.13:0,60,634	0/0:12,0:12:36.07:0,36,374	0/0:16,0:16:48.12:0,48,515	0/0:13,0:13:36.09:0,36,387	0/0:19,0:19:51.11:0,51,536	0/0:28,0:28:75.06:0,75,749	0/0:25,0:25:63.08:0,63,646	0/0:21,0:21:42.08:0,42,432	0/0:20,0:20:60.14:0,60,636	0/0:12,0:12:36.08:0,36,380	0/0:26,0:26:72.17:0,72,767	0/0:14,0:14:39.10:0,39,418	0/0:23,0:23:63.07:0,63,649	1/1:1,15:16:36.12:473,36,0	0/0:30,0:30:84.21:0,84,903	0/0:18,0:18:51.13:0,51,547	0/0:11,0:11:33.08:0,33,354
chr10	44080888	.	T	TC	6119.89	PASS	AB=1.000;AC=41;AF=0.732;AN=56;BaseQRankSum=15.602;DP=537;FS=13.322;HRun=0;HaplotypeScore=179.8787;InbreedingCoeff=0.9068;MQ=80.46;MQ0=0;MQRankSum=-10.279;QD=15.22;ReadPosRankSum=2.583;VQSLOD=5.4547;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:32,0:32:73.48:476,73,0	0/0:12,0:12:36.11:0,36,488	0/0:25,0:26:75.06:0,75,895	0/0:14,0:14:18.39:0,18,333	1/1:21,1:22:53.61:322,54,0	0/0:23,0:23:63.20:0,63,865	0/0:18,0:18:54.16:0,54,737	1/1:22,2:23:65.54:454,66,0	0/0:18,0:18:51.17:0,51,713	1/1:18,0:18:46.76:274,47,0	1/1:16,0:16:18.15:177,18,0	1/1:22,0:22:56.02:371,56,0	1/1:14,0:14:20.91:185,21,0	1/1:13,1:14:38.44:311,38,0	1/1:25,0:25:52.86:326,53,0	1/1:23,1:24:52.58:437,53,0	0/0:24,0:24:66.22:0,66,922	0/1:8,0:8:12.59:62,0,13	1/1:15,0:15:43.65:260,44,0	1/1:23,0:23:58.78:388,59,0	1/1:20,0:20:41.17:255,41,0	1/1:18,0:18:43.50:283,44,0	1/1:13,0:13:35.10:233,35,0	1/1:17,0:17:14.79:160,15,0	1/1:24,0:24:51.28:346,51,0	1/1:25,0:25:68.56:387,69,0	1/1:20,0:20:31.27:258,31,0	1/1:8,0:8:23.68:154,24,0
chr10	44080889	.	T	TCA	18626.52	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=12.896;DP=527;FS=13.876;HRun=0;HaplotypeScore=140.4399;InbreedingCoeff=0.9910;MQ=81.24;MQ0=0;MQRankSum=-10.788;QD=47.76;ReadPosRankSum=1.831;VQSLOD=4.1124;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,31:32:75.26:1415,75,0	0/0:12,0:12:33.11:0,33,538	0/0:27,0:27:75.18:0,75,1103	0/0:13,0:13:15.19:0,15,393	1/1:1,21:22:57.20:1082,57,0	0/0:23,0:23:63.22:0,63,1027	0/0:19,0:19:51.17:0,51,832	1/1:2,21:22:66.23:1195,66,0	0/0:19,0:19:54.17:0,54,857	1/1:3,13:16:48.16:875,48,0	1/1:0,14:14:33.11:602,33,0	1/1:0,22:22:57.20:1082,57,0	1/1:0,12:12:36.12:679,36,0	1/1:1,13:14:39.13:695,39,0	1/1:1,24:25:54.18:1025,54,0	1/1:2,22:24:66.23:1226,66,0	0/0:24,0:24:69.22:0,69,1103	1/1:1,6:7:12.04:229,12,0	1/1:0,14:14:42.14:803,42,0	1/1:0,21:21:60.20:1053,60,0	1/1:0,18:20:42.14:778,42,0	1/1:0,16:17:45.15:836,45,0	1/1:0,13:13:36.12:643,36,0	1/1:0,17:17:30.10:568,30,0	1/1:0,23:23:57.19:1059,57,0	1/1:0,25:25:72.25:1365,72,0	1/1:0,20:20:51.17:960,51,0	1/1:0,8:9:24.08:457,24,0
chr10	44080959	.	GTGGAACAGC	G	2966.15	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=6.928;DP=564;FS=2.189;HRun=0;HaplotypeScore=231.2218;InbreedingCoeff=0.9876;MQ=85.38;MQ0=0;MQRankSum=-8.999;QD=60.53;ReadPosRankSum=1.439;VQSLOD=3.5832;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:87.08:0,87,3301	0/0:14,0:14:42.14:0,42,1519	0/0:18,0:18:54.14:0,54,1977	0/0:25,0:25:72.25:0,72,3158	0/0:17,0:17:48.04:0,48,1816	0/0:18,0:18:48.16:0,48,2246	0/0:24,0:24:69.21:0,69,2923	0/0:24,0:23:69.15:0,69,2258	0/0:29,0:29:84.26:0,84,3728	1/1:3,24:27:69.64:2058,70,0	1/1:3,7:10:12.04:354,12,0	0/0:21,0:21:57.12:0,57,2340	0/0:22,0:22:66.17:0,66,2948	0/0:18,0:18:54.05:0,54,2110	0/0:26,0:26:72.25:0,72,2848	0/0:23,0:23:63.16:0,63,2345	0/0:28,0:28:84.29:0,84,3238	0/0:11,0:11:33.07:0,33,1228	0/0:14,0:14:39.11:0,39,1317	0/0:16,0:16:44.44:0,44,1579	0/0:32,0:32:84.76:0,85,3924	0/0:22,0:22:62.99:0,63,2460	0/0:13,0:13:26.81:0,27,1029	0/0:19,0:19:57.20:0,57,2583	1/1:4,8:12:24.08:693,24,0	0/0:13,0:13:33.58:0,34,1461	0/0:21,0:21:57.09:0,57,2356	0/0:15,0:15:42.14:0,42,1822
chr10	44081058	.	CT	C	4416.56	PASS	AB=0.522;AC=15;AF=0.268;AN=56;BaseQRankSum=7.911;DP=594;FS=12.524;HRun=8;HaplotypeScore=68.7986;InbreedingCoeff=0.9344;MQ=82.67;MQ0=0;MQRankSum=0.071;QD=24.13;ReadPosRankSum=4.969;VQSLOD=4.6188;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,36:37:99:985,102,0	0/0:7,0:7:18.04:0,18,206	0/0:24,0:24:53.70:0,54,557	0/0:21,0:21:37.15:0,37,343	1/1:3,20:23:54.07:521,54,0	0/0:29,0:29:75.22:0,75,887	0/0:22,0:22:63.18:0,63,750	0/0:16,0:15:39.11:0,39,463	0/0:22,0:22:57.17:0,57,679	0/0:29,0:29:84.21:0,84,983	0/0:5,0:5:15.05:0,15,181	0/0:30,0:30:84.14:0,84,969	0/0:16,0:16:42.11:0,42,486	0/0:22,0:22:60.15:0,60,694	0/0:23,0:23:60.09:0,60,680	0/0:24,0:24:72.21:0,72,854	0/0:26,0:26:75.23:0,75,905	0/0:23,0:23:66.16:0,66,768	1/1:2,17:19:51.07:488,51,0	1/1:3,11:14:30.04:290,30,0	1/1:1,26:27:69.11:666,69,0	0/0:12,0:12:36.05:0,36,397	0/0:14,0:14:36.10:0,36,425	0/0:30,0:30:81.25:0,81,978	0/0:16,0:16:39.09:0,39,443	0/1:2,22:24:3.32:539,0,3	1/1:4,24:28:66.10:637,66,0	1/1:1,10:11:30.05:290,30,0
chr10	44081603	.	TCCTC	T	1161.85	PASS	AB=0.990;AC=17;AF=0.354;AN=48;BaseQRankSum=5.121;DP=273;FS=18.542;HRun=0;HaplotypeScore=45.4122;InbreedingCoeff=0.4477;MQ=42.15;MQ0=59;MQRankSum=-1.788;QD=8.61;ReadPosRankSum=1.132;VQSLOD=0.5966;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:9,0:8:4.09:89,0,4	1/1:5,0:4:1.77:3,2,0	0/0:6,0:2:6:0,6,52	0/0:6,0:2:6.01:0,6,64	1/1:3,9:11:2.05:103,2,0	0/0:6,0:3:8.79:0,9,63	0/0:21,0:14:29.62:0,30,248	0/0:11,0:1:2.92:0,3,17	0/1:8,0:3:5.83:6,0,41	./.	./.	0/0:11,0:8:20.99:0,21,202	0/0:9,0:3:8.99:0,9,75	0/0:11,0:11:26.71:0,27,208	0/0:6,0:5:11.93:0,12,93	0/0:6,0:5:14.77:0,15,107	0/1:18,0:18:7.07:227,0,7	0/1:10,0:9:2.02:2,0,124	0/1:14,0:9:32.07:110,0,32	1/1:4,0:3:9:80,9,0	1/1:28,0:18:16.24:264,16,0	0/0:8,0:6:14.78:0,15,110	0/0:7,0:7:20.98:0,21,175	0/0:13,0:12:15.95:0,16,249	./.	1/1:14,0:11:13.24:212,13,0	1/1:12,0:12:14.02:223,14,0	./.
chr10	44082163	.	AAC	A	331.48	PASS	AB=0.816;AC=14;AF=0.280;AN=50;BaseQRankSum=1.305;DP=512;FS=13.313;HRun=0;HaplotypeScore=74.8003;InbreedingCoeff=0.6323;MQ=68.16;MQ0=12;MQRankSum=0.883;QD=2.88;ReadPosRankSum=-0.607;VQSLOD=0.3783;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:15:0,15,170	1/1:6,0:6:5.81:45,6,0	./.	./.	0/0:21,0:21:15.03:0,15,173	1/1:10,4:13:14.87:141,15,0	0/1:19,9:28:31.93:83,0,32	./.	0/0:12,0:15:9.01:0,9,111	1/1:11,0:18:13.30:61,13,0	0/1:6,0:7:0:0,0,0	0/0:13,0:21:14.99:0,15,130	0/0:21,0:21:20.94:0,21,194	0/0:17,0:17:19.47:0,19,142	0/0:17,0:20:5.85:0,6,70	1/1:14,2:15:6.90:66,7,0	1/1:8,5:13:6.01:64,6,0	0/0:21,0:21:21.03:0,21,267	0/0:8,0:8:3.01:0,3,39	0/0:9,0:9:14.38:0,14,97	0/0:15,0:24:6:0,6,51	0/0:15,0:23:5.05:0,5,45	0/0:10,0:11:5.99:0,6,49	0/0:20,0:20:9:0,9,89	1/1:4,0:12:5.68:28,6,0	0/0:25,0:25:15.86:0,16,141	0/0:17,0:17:21.02:0,21,253	0/0:11,0:12:14.99:0,15,145
chr10	44082424	.	CG	C	1006.18	PASS	AB=0.745;AC=32;AF=0.593;AN=54;BaseQRankSum=-3.359;DP=263;FS=18.827;HRun=11;HaplotypeScore=45.5862;InbreedingCoeff=0.2697;MQ=95.59;MQ0=2;MQRankSum=-1.135;QD=5.95;ReadPosRankSum=4.530;VQSLOD=0.2481;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,9:14:20.95:171,21,0	./.	0/0:27,1:17:4.74:0,5,148	0/0:28,0:21:20.85:0,21,146	1/1:3,0:4:2.04:6,2,0	0/0:2,0:2:0:0,0,0	0/0:10,0:10:11.48:0,11,107	0/0:14,0:14:5.30:0,5,38	0/1:11,0:11:1.52:2,0,128	0/0:3,0:3:0.47:0,0,1	0/0:2,0:2:1.82:0,2,5	0/1:8,5:14:25.77:57,0,26	0/1:2,7:9:8.18:62,0,8	0/1:4,7:11:26.68:119,0,27	1/1:7,3:10:3.11:105,3,0	1/1:1,3:4:5.99:49,6,0	0/0:5,0:6:9.56:0,10,55	1/1:3,7:10:14.97:122,15,0	0/1:9,2:13:2.51:93,0,3	1/1:5,1:6:2.97:25,3,0	0/1:12,1:15:18.89:48,0,19	1/1:7,3:11:13.97:98,14,0	1/1:2,1:3:2.99:25,3,0	1/1:3,6:9:8.03:55,8,0	1/1:7,0:7:0.91:2,1,0	1/1:3,2:5:5.97:46,6,0	1/1:3,2:5:5.98:49,6,0	1/1:8,0:8:2.96:25,3,0
chr10	44083868	.	T	TA	8357.53	PASS	AB=0.629;AC=32;AF=0.571;AN=56;BaseQRankSum=-12.574;DP=675;FS=1.845;HRun=10;HaplotypeScore=68.3324;InbreedingCoeff=0.8417;MQ=81.60;MQ0=0;MQRankSum=-1.914;QD=20.53;ReadPosRankSum=1.449;VQSLOD=5.9006;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,21:24:45.19:615,45,0	0/0:21,1:22:24.86:0,25,401	0/0:14,0:15:17.23:0,17,171	0/0:24,0:24:23.64:0,24,291	1/1:6,26:33:50.33:707,50,0	0/0:17,0:19:42.98:0,43,329	0/0:22,0:22:59.85:0,60,481	0/0:30,1:33:42.41:0,42,537	0/0:25,0:25:56.92:0,57,468	0/0:33,0:34:79.91:0,80,646	0/0:22,0:22:56.93:0,57,468	1/1:6,17:23:45.11:478,45,0	1/1:2,20:22:51.13:543,51,0	1/1:1,24:25:60.01:612,60,0	1/1:9,24:33:57.14:608,57,0	1/1:2,17:19:20.47:423,20,0	0/0:31,1:32:42.88:0,43,555	1/1:6,27:33:41.52:646,42,0	1/1:7,11:18:11.44:320,11,0	0/1:9,13:22:34.90:258,0,35	0/1:9,13:22:35.58:443,0,36	1/1:7,9:18:29.74:284,30,0	1/1:9,22:32:66.03:686,66,0	1/1:9,24:33:19.89:623,20,0	0/0:20,0:20:47.91:0,48,391	1/1:7,17:24:29.36:502,29,0	1/1:1,19:19:45.11:480,45,0	1/1:0,6:6:12.03:128,12,0
chr10	44084449	.	G	GAA	24343.08	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-17.905;DP=716;FS=3.289;HRun=0;HaplotypeScore=74.3553;InbreedingCoeff=0.9993;MQ=79.56;MQ0=0;MQRankSum=-3.620;QD=54.34;ReadPosRankSum=4.797;VQSLOD=5.1629;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,36:38:99:2134,106,0	0/0:10,0:10:30.10:0,30,485	0/0:22,0:22:57.19:0,57,901	0/0:18,0:18:51.10:0,51,775	1/1:0,15:15:42.14:854,42,0	0/0:17,0:17:48.16:0,48,783	0/0:27,0:27:81.28:0,81,1310	0/0:36,0:36:99:0,99,1566	0/0:34,0:34:99:0,99,1608	0/0:28,0:28:84.28:0,84,1338	0/0:27,0:27:78.27:0,78,1268	1/1:1,21:22:66.18:1300,66,0	1/1:1,36:38:99:2002,99,0	1/1:1,25:26:75.26:1524,75,0	1/1:1,40:43:99:2276,114,0	1/1:2,22:25:23.29:1334,23,0	0/0:27,0:27:81.28:0,81,1322	1/1:0,21:22:54.19:1096,54,0	1/1:3,21:24:69.24:1399,69,0	1/1:1,19:22:57.16:1113,57,0	1/1:1,27:29:75.26:1524,75,0	1/1:1,24:25:72.20:1399,72,0	1/1:1,14:17:42.14:841,42,0	1/1:0,30:31:75.26:1524,75,0	0/0:22,0:22:60.19:0,60,955	1/1:2,31:33:93.32:1891,93,0	1/1:1,28:30:81.16:1646,81,0	1/1:0,8:8:24.08:488,24,0
chr10	44084617	.	AAC	A	10551.64	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=12.052;DP=504;FS=6.951;HRun=0;HaplotypeScore=73.6377;InbreedingCoeff=0.9983;MQ=77.64;MQ0=0;MQRankSum=-3.888;QD=32.87;ReadPosRankSum=4.698;VQSLOD=7.1266;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,24:27:60.16:802,60,0	0/0:14,0:14:42.14:0,42,745	0/0:20,0:20:50.26:0,50,955	0/0:13,0:13:29.01:0,29,434	1/1:0,10:10:27.01:321,27,0	0/0:16,0:16:48.13:0,48,792	0/0:23,0:23:69.22:0,69,1150	0/0:14,0:14:30.10:0,30,530	0/0:20,0:20:60.21:0,60,1051	0/0:11,0:11:33.11:0,33,577	0/0:10,0:10:30.10:0,30,532	1/1:1,20:21:54.18:742,54,0	1/1:1,26:27:63.21:865,63,0	1/1:1,24:25:57.19:783,57,0	1/1:3,34:37:90.26:1215,90,0	1/1:1,17:18:48.16:659,48,0	0/0:27,0:27:72.21:0,72,1243	1/1:3,16:19:45.15:618,45,0	1/1:1,14:15:42.13:556,42,0	1/1:1,9:10:30.10:411,30,0	1/1:1,15:16:39.60:536,40,0	1/1:0,12:12:36.08:469,36,0	1/1:1,15:16:36.08:473,36,0	1/1:2,27:29:72.24:989,72,0	0/0:15,0:15:45.12:0,45,733	1/1:0,7:7:21.06:269,21,0	1/1:2,17:19:42.04:555,42,0	1/1:4,9:13:21.07:288,21,0
chr10	44084882	.	GTGGGACCATCATCCAGT	G	26987.94	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=16.679;DP=612;FS=1.995;HRun=0;HaplotypeScore=294.0204;InbreedingCoeff=0.9903;MQ=84.17;MQ0=0;MQRankSum=-17.585;QD=83.04;ReadPosRankSum=7.641;VQSLOD=3.9763;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,20:32:39.13:1892,39,0	0/0:12,0:12:36.12:0,36,2571	0/0:20,0:20:48.16:0,48,2981	0/0:34,0:34:91.50:0,92,4979	1/1:7,8:15:15.52:734,16,0	0/0:22,0:22:57.19:0,57,3973	0/0:34,0:34:99:0,99,7637	0/0:34,0:34:81.28:0,81,5610	0/0:26,0:26:78.25:0,78,5740	0/0:22,0:22:54.19:0,54,4419	0/0:21,0:21:54.19:0,54,4075	1/1:2,16:18:36.12:1761,36,0	1/1:1,16:17:48.16:2346,48,0	1/1:4,23:27:57.20:2765,57,0	1/1:4,27:31:66.23:3227,66,0	1/1:3,11:15:30.10:1467,30,0	0/0:39,0:39:99:0,117,8655	1/1:3,13:16:30.10:1467,30,0	1/1:3,5:8:15.04:579,15,0	1/1:4,14:18:36.04:1631,36,0	1/1:11,12:23:15.05:733,15,0	1/1:4,11:15:27.09:1320,27,0	1/1:2,17:20:32.85:1601,33,0	1/1:4,14:18:15.30:548,15,0	0/0:23,0:23:66.23:0,66,5087	1/1:8,14:22:42.14:1982,42,0	1/1:4,16:20:39.13:1908,39,0	1/1:1,9:10:21.07:1027,21,0
chr10	44085885	.	G	GCTT	8338.30	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=14.754;DP=696;FS=0.000;HRun=0;HaplotypeScore=102.7345;InbreedingCoeff=0.9226;MQ=52.72;MQ0=28;MQRankSum=-1.142;QD=18.01;ReadPosRankSum=3.816;VQSLOD=4.2680;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,31:33:23.73:270,24,0	0/0:8,0:7:18:0,18,197	0/0:25,0:8:19.99:0,20,251	0/0:31,0:15:19.25:0,19,263	1/1:4,12:15:7.35:44,7,0	0/0:14,0:12:27:0,27,300	0/0:39,0:38:99:0,108,1321	0/0:15,0:15:39.98:0,40,380	0/0:29,0:29:87.11:0,87,1200	0/0:13,0:11:27.19:0,27,251	0/0:8,0:8:11.27:0,11,167	1/1:12,34:44:75.20:1395,75,0	1/1:8,34:39:63.18:1305,63,0	1/1:8,21:30:42.14:825,42,0	1/1:10,2:32:36.05:596,36,0	1/1:6,2:22:30.05:513,30,0	0/0:40,0:40:99:0,117,1672	1/1:6,2:26:24.08:412,24,0	1/1:17,0:14:19.46:267,19,0	1/1:8,0:7:8.99:77,9,0	1/1:12,44:56:10.80:231,11,0	1/1:5,13:17:20.98:196,21,0	1/1:4,8:11:6.95:136,7,0	1/1:9,40:43:18.14:1278,18,0	0/0:11,0:9:15:0,15,150	1/1:21,1:21:44.91:455,45,0	1/1:4,3:13:18.03:273,18,0	1/1:0,5:5:3.01:64,3,0
chr10	44085887	.	TGC	T	707.38	PASS	AB=0.874;AC=16;AF=0.286;AN=56;BaseQRankSum=6.004;DP=661;FS=35.987;HRun=0;HaplotypeScore=107.8474;InbreedingCoeff=-0.2775;MQ=52.96;MQ0=28;MQRankSum=0.995;QD=1.75;ReadPosRankSum=0.722;VQSLOD=0.2861;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:31,2:29:43.70:44,0,50	0/0:8,0:7:18.06:0,18,297	0/0:25,0:8:24.06:0,24,383	0/0:30,0:14:33.10:0,33,514	0/0:11,3:13:1.27:0,1,23	0/0:13,0:11:27.09:0,27,416	0/0:38,0:37:99:0,107,1872	0/0:14,0:14:42.13:0,42,661	0/0:30,0:30:90.29:0,90,1670	0/0:13,0:11:33.11:0,33,474	0/0:10,0:10:19.78:0,20,304	0/1:32,11:40:99:146,0,321	0/1:35,6:37:77.07:77,0,302	0/1:23,6:29:89.87:90,0,199	0/1:22,8:28:22.54:145,0,23	0/1:17,5:21:30.04:102,0,30	0/0:41,0:41:99:0,123,2221	0/1:14,5:18:66.08:66,0,66	0/1:15,2:14:25.14:25,0,129	0/1:7,0:6:1.44:1,0,23	0/1:54,4:57:88.45:88,0,97	0/1:16,1:15:14.01:14,0,93	0/0:7,2:8:5.82:0,6,49	0/1:41,7:41:5.86:6,0,441	0/0:12,0:10:21.06:0,21,280	0/1:18,3:20:32.21:32,0,212	0/1:12,2:11:14.25:14,0,63	1/1:5,0:5:2.27:8,2,0
chr10	44085891	.	G	GCTT	8643.92	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=12.739;DP=663;FS=4.702;HRun=0;HaplotypeScore=102.3720;InbreedingCoeff=0.9304;MQ=54.37;MQ0=27;MQRankSum=1.597;QD=19.96;ReadPosRankSum=3.105;VQSLOD=4.3433;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:32,0:28:16.13:237,16,0	0/0:9,0:8:20.99:0,21,220	0/0:24,0:10:26.38:0,26,332	0/0:32,0:15:22.83:0,23,283	1/1:11,0:10:8.93:65,9,0	0/0:13,0:11:24.01:0,24,277	0/0:38,0:37:99:0,108,1331	0/0:12,0:12:32.98:0,33,347	0/0:28,0:28:81.15:0,81,1161	0/0:14,0:12:26.92:0,27,279	0/0:10,0:10:17.99:0,18,224	1/1:44,0:41:78.20:1436,78,0	1/1:41,0:38:63.18:1295,63,0	1/1:30,0:30:48.14:872,48,0	1/1:30,0:28:39.05:621,39,0	1/1:22,0:21:33.04:540,33,0	0/0:39,0:39:99:0,111,1632	1/1:18,0:17:24.08:414,24,0	1/1:15,0:12:8.73:232,9,0	1/1:7,0:6:9:79,9,0	1/1:63,0:62:24.45:351,24,0	1/1:14,0:12:12.46:154,12,0	1/1:11,0:10:8.98:159,9,0	1/1:50,0:43:24.20:1335,24,0	0/0:11,0:9:20.33:0,20,178	1/1:7,16:24:30.92:513,31,0	1/1:14,0:11:18.04:274,18,0	1/1:5,0:5:3.01:65,3,0
chr10	44087314	.	TTATA	T	4880.11	PASS	AB=1.000;AC=33;AF=0.611;AN=54;BaseQRankSum=10.836;DP=283;FS=0.513;HRun=0;HaplotypeScore=48.3668;InbreedingCoeff=0.7548;MQ=67.51;MQ0=3;MQRankSum=1.416;QD=32.53;ReadPosRankSum=5.101;VQSLOD=4.1945;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,12:12:18.06:342,18,0	0/0:3,0:3:9.03:0,9,243	0/0:11,0:4:5.83:0,6,64	0/1:14,0:8:7.15:7,0,28	1/1:1,9:10:6.02:114,6,0	0/0:28,0:28:84.29:0,84,2185	0/0:1,0:1:3.01:0,3,81	0/0:34,0:34:96.31:0,96,2328	0/0:8,0:8:24.07:0,24,542	0/0:9,0:9:27.09:0,27,657	0/0:1,0:1:3.01:0,3,81	1/1:0,7:7:12.04:228,12,0	1/1:0,3:3:9.03:171,9,0	1/1:0,6:6:15.05:285,15,0	1/1:0,13:13:21.07:398,21,0	1/1:1,6:7:6.02:114,6,0	0/0:23,0:23:66.22:0,66,1692	1/1:0,19:19:42.14:797,42,0	1/1:0,9:9:27.09:473,27,0	1/1:1,5:6:6.02:114,6,0	1/1:1,7:8:12:228,12,0	1/1:0,2:2:6.02:114,6,0	1/1:0,4:4:12.04:228,12,0	./.	0/0:13,0:13:36.12:0,36,965	1/1:0,9:9:27.08:471,27,0	1/1:1,4:5:6.02:114,6,0	1/1:1,15:16:36.12:683,36,0
chr10	44087609	.	TA	T	4385.10	PASS	AB=0.761;AC=32;AF=0.571;AN=56;BaseQRankSum=11.172;DP=467;FS=2.691;HRun=10;HaplotypeScore=54.2760;InbreedingCoeff=0.8450;MQ=79.83;MQ0=1;MQRankSum=3.170;QD=15.44;ReadPosRankSum=1.278;VQSLOD=5.0860;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:80.90:0,81,851	1/1:0,4:4:12:104,12,0	0/1:16,8:20:79.52:140,0,80	0/1:12,5:16:82.98:83,0,92	0/0:19,0:19:54.13:0,54,582	1/1:2,24:26:62.98:547,63,0	1/1:4,10:14:29.59:244,30,0	1/1:6,22:28:62.95:543,63,0	1/1:0,12:12:32.99:287,33,0	1/1:3,0:25:38.93:119,39,0	1/1:1,0:10:18.33:54,18,0	1/1:5,16:21:44.98:390,45,0	1/1:2,12:14:32.99:286,33,0	1/1:2,20:22:50.99:443,51,0	0/0:16,0:16:44.95:0,45,479	0/0:11,0:11:30.07:0,30,325	1/1:1,15:16:41.98:365,42,0	0/0:16,0:16:41.95:0,42,445	0/0:17,0:17:42.10:0,42,456	0/0:5,0:5:15.04:0,15,166	0/0:17,0:17:45.12:0,45,498	1/1:1,7:9:23.03:188,23,0	1/1:2,12:15:41.03:344,41,0	1/1:2,9:11:20.98:182,21,0	1/1:0,0:15:22.41:66,22,0	0/0:18,0:18:45.11:0,45,490	0/0:17,0:17:51.14:0,51,564	0/0:14,0:14:34.90:0,35,363
chr10	44088106	.	GACAT	G	19202.03	PASS	AB=0.574;AC=32;AF=0.571;AN=56;BaseQRankSum=15.689;DP=673;FS=5.405;HRun=0;HaplotypeScore=143.8508;InbreedingCoeff=0.9005;MQ=72.63;MQ0=3;MQRankSum=-10.389;QD=47.30;ReadPosRankSum=5.411;VQSLOD=5.5259;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,29:33:87.27:1614,87,0	0/0:8,0:8:24.05:0,24,541	0/0:33,0:33:56.74:0,57,1573	0/0:30,0:29:78.14:0,78,1582	1/1:9,22:31:66.21:1232,66,0	0/0:23,0:23:66.17:0,66,1619	0/0:24,0:24:72.21:0,72,1796	0/0:29,0:29:78.25:0,78,1931	0/0:31,0:31:63.39:0,63,2209	0/0:32,0:32:96.28:0,96,2246	0/0:26,0:26:43.38:0,43,1939	1/1:4,22:25:75.16:1324,75,0	1/1:6,22:28:84.16:1442,84,0	1/1:5,19:24:69.21:1253,69,0	1/1:7,29:36:99:1718,102,0	1/1:6,26:32:93.26:1665,93,0	0/0:20,0:20:60.17:0,60,1485	0/1:3,13:16:5.82:679,0,6	1/1:7,7:14:39.09:594,39,0	1/1:6,13:19:51.09:849,51,0	1/1:13,20:33:81.20:1354,81,0	1/1:2,16:18:51.16:951,51,0	1/1:1,11:12:33.10:603,33,0	1/1:4,20:24:63.03:1174,63,0	0/0:11,0:10:30.09:0,30,762	0/1:9,19:28:0.84:1242,0,1	1/1:5,18:23:66.15:1138,66,0	1/1:1,6:7:21.04:370,21,0
chr10	44088172	.	TAG	T	16781.12	PASS	AB=0.568;AC=32;AF=0.571;AN=56;BaseQRankSum=15.602;DP=688;FS=9.707;HRun=0;HaplotypeScore=116.7376;InbreedingCoeff=0.8526;MQ=82.72;MQ0=1;MQRankSum=-7.569;QD=39.67;ReadPosRankSum=5.540;VQSLOD=6.1242;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,27:28:69.23:1056,69,0	0/0:8,0:8:24.08:0,24,464	0/0:26,0:26:74.90:0,75,1355	0/0:23,0:23:63.13:0,63,1112	1/1:2,35:37:87.30:1331,87,0	0/0:19,0:19:57.18:0,57,1068	0/0:20,0:20:60.21:0,60,1159	0/0:30,0:30:87.30:0,87,1671	0/0:28,0:28:81.26:0,81,1521	0/0:42,0:42:99:0,126,2433	0/0:25,0:25:75.26:0,75,1448	1/1:2,22:23:63.21:964,63,0	1/1:0,22:22:63.21:963,63,0	1/1:2,19:21:54.18:826,54,0	1/1:1,33:34:96.33:1470,96,0	0/1:3,27:30:28.59:1152,0,29	0/0:26,0:26:75.26:0,75,1448	0/1:5,9:14:82.84:358,0,83	1/1:0,10:10:30.10:455,30,0	1/1:0,26:26:72.24:1102,72,0	1/1:2,37:39:99:1562,102,0	1/1:2,20:22:63.17:938,63,0	1/1:0,32:32:89.95:1377,90,0	1/1:1,19:20:46.62:732,47,0	0/0:18,0:18:54.19:0,54,1042	1/1:4,23:27:17.27:1025,17,0	1/1:0,22:22:59.94:918,60,0	1/1:3,12:15:36.12:551,36,0
chr10	44088409	.	T	TG	140.30	PASS	AB=0.967;AC=12;AF=0.231;AN=52;BaseQRankSum=5.535;DP=451;FS=3.619;HRun=0;HaplotypeScore=68.5600;InbreedingCoeff=0.3017;MQ=78.03;MQ0=0;MQRankSum=-2.070;QD=1.67;ReadPosRankSum=-3.795;VQSLOD=0.6255;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:16,1:17:15.37:22,0,15	0/0:17,0:17:42.11:0,42,564	0/0:26,0:25:65.14:0,65,916	0/0:28,0:28:84.28:0,84,1174	./.	0/0:30,0:30:78.24:0,78,1058	0/0:22,0:22:63.16:0,63,827	0/0:29,0:29:81.25:0,81,1087	0/0:28,0:28:78.26:0,78,1089	0/0:36,0:36:87.28:0,87,1187	0/0:19,0:19:36.08:0,36,454	0/0:8,0:8:7.05:0,7,17	0/1:5,1:6:20.50:26,0,21	0/1:9,0:9:8.13:8,0,9	0/1:15,0:15:13.36:21,0,13	0/1:12,0:12:3.89:4,0,85	0/0:29,0:29:84.26:0,84,1152	0/0:12,0:12:4.86:0,5,12	1/1:11,0:11:3.40:54,3,0	./.	0/1:3,0:3:0:0,0,0	0/0:9,0:9:4.76:0,5,11	0/0:9,0:9:0:0,0,0	1/1:6,1:7:1.18:15,1,0	0/0:21,0:21:48.16:0,48,667	0/0:6,0:6:1.83:0,2,4	0/0:9,0:9:9.98:0,10,25	1/1:1,3:4:7.95:120,8,0
chr10	44091377	.	GT	G	16174.88	PASS	AB=0.525;AC=33;AF=0.589;AN=56;BaseQRankSum=13.395;DP=728;FS=6.852;HRun=2;HaplotypeScore=75.3150;InbreedingCoeff=0.9256;MQ=90.48;MQ0=0;MQRankSum=-4.088;QD=35.24;ReadPosRankSum=5.583;VQSLOD=5.0526;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,60:62:99:2219,172,0	0/0:13,0:13:39.13:0,39,584	0/0:18,0:18:25.68:0,26,593	0/0:38,0:37:96.21:0,96,1404	1/1:2,19:21:54.13:682,54,0	0/0:15,0:15:45.13:0,45,636	0/0:29,0:29:87.29:0,87,1303	0/0:29,0:29:87.28:0,87,1280	0/0:32,0:32:93.31:0,93,1376	0/0:40,0:40:99:0,117,1687	0/0:14,0:14:42.13:0,42,610	1/1:0,22:22:60.19:777,60,0	1/1:0,27:27:75.24:973,75,0	1/1:0,35:35:99:1284,99,0	1/1:0,31:31:87.28:1129,87,0	1/1:0,28:28:78.25:1013,78,0	0/0:27,0:27:81.27:0,81,1213	1/1:0,21:21:60.20:779,60,0	1/1:1,19:20:57.18:739,57,0	1/1:0,20:20:57.19:738,57,0	1/1:2,46:48:99:1636,126,0	1/1:1,20:21:48.16:623,48,0	1/1:2,18:20:48.16:623,48,0	1/1:0,28:28:81.26:1052,81,0	0/0:14,0:14:42.14:0,42,629	0/1:2,19:21:26.75:663,0,27	1/1:2,25:27:75.24:974,75,0	1/1:0,7:7:21.07:273,21,0
chr10	44092675	.	T	TGAGA	509.85	PASS	AB=1.000;AC=17;AF=0.447;AN=38;BaseQRankSum=1.344;DP=246;FS=16.916;HRun=0;HaplotypeScore=63.4285;InbreedingCoeff=0.4100;MQ=50.19;MQ0=6;MQRankSum=-3.303;QD=6.00;ReadPosRankSum=0.838;VQSLOD=0.4808;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:9,0:8:0:0,0,0	0/0:7,0:7:2.14:0,2,43	0/1:13,0:6:11.89:12,0,43	0/1:10,0:8:1.95:2,0,88	./.	0/0:16,0:16:8.58:0,9,119	0/0:19,0:18:15.05:0,15,248	0/0:13,0:12:27.09:0,27,436	0/0:9,0:9:5.98:0,6,70	0/0:4,0:3:6.02:0,6,94	0/0:13,0:13:1.30:0,1,47	0/0:7,0:7:0:0,0,0	1/1:12,0:12:4.37:43,4,0	./.	./.	1/1:4,0:4:3.01:52,3,0	1/1:5,6:11:13.35:192,13,0	1/1:5,0:5:9.01:127,9,0	1/1:7,0:6:6.02:115,6,0	./.	./.	./.	./.	0/0:8,0:7:0:0,0,0	./.	./.	1/1:8,0:7:2.02:39,2,0	1/1:6,0:6:3.01:51,3,0
chr10	44093487	.	C	CG	487.71	PASS	AB=0.944;AC=28;AF=0.583;AN=48;BaseQRankSum=-1.854;DP=200;FS=7.047;HRun=9;HaplotypeScore=39.2382;InbreedingCoeff=0.4198;MQ=95.02;MQ0=2;MQRankSum=-0.462;QD=4.10;ReadPosRankSum=-0.329;VQSLOD=-0.5289;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	0/1:6,0:6:11.06:11,0,70	0/1:18,0:14:9.11:9,0,114	0/0:16,0:16:13.93:0,14,124	1/1:3,0:4:2.84:14,3,0	1/1:3,2:4:9.01:91,9,0	1/1:1,13:14:18.52:200,19,0	0/0:11,0:14:4.05:0,4,12	1/1:2,10:12:9.02:100,9,0	0/0:6,0:14:11.12:0,11,32	0/1:2,0:7:4.79:6,0,5	1/1:1,0:3:2.84:14,3,0	1/1:3,0:3:0.47:1,0,0	0/0:2,0:2:2.04:0,2,6	1/1:6,0:8:6.62:30,7,0	1/1:2,1:6:8.66:62,9,0	0/0:15,0:16:35:0,35,287	1/1:5,1:16:11.36:57,11,0	0/1:3,0:3:0:0,0,0	./.	1/1:5,0:5:1.46:6,1,0	0/1:1,0:2:0:0,0,0	./.	0/1:3,0:3:0:0,0,0	0/0:3,0:9:10.18:0,10,30	0/0:6,0:6:0.47:0,0,1	1/1:3,0:3:3.46:25,3,0	./.
chr10	44094102	.	CA	C	14841.29	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=11.719;DP=639;FS=0.645;HRun=2;HaplotypeScore=68.1287;InbreedingCoeff=0.9988;MQ=82.53;MQ0=0;MQRankSum=-1.646;QD=34.68;ReadPosRankSum=6.847;VQSLOD=4.5444;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,47:47:99:1673,129,0	0/0:6,0:6:18.05:0,18,248	0/0:16,0:16:47.89:0,48,585	0/0:20,0:20:40.91:0,41,528	1/1:1,22:23:66.21:855,66,0	0/0:18,0:18:51.14:0,51,705	0/0:29,0:29:81.23:0,81,1151	0/0:34,0:34:99:0,102,1406	0/0:20,0:20:60.14:0,60,835	0/0:17,0:17:51.17:0,51,749	0/0:14,0:14:42.13:0,42,611	1/1:0,27:27:75.24:973,75,0	1/1:0,24:24:66.21:855,66,0	1/1:1,25:26:63.20:817,63,0	1/1:1,18:19:51.17:661,51,0	1/1:0,20:20:54.18:700,54,0	0/0:23,0:23:69.23:0,69,1033	1/1:0,19:19:51.17:661,51,0	1/1:0,21:21:63.18:787,63,0	1/1:0,21:21:63.09:777,63,0	1/1:0,35:35:96.31:1244,96,0	1/1:0,19:19:48.16:622,48,0	1/1:0,18:18:42.11:545,42,0	1/1:0,39:39:99:1362,105,0	0/0:14,0:14:42.14:0,42,628	1/1:0,27:27:78.18:951,78,0	1/1:0,23:23:57.02:739,57,0	1/1:0,20:20:48.16:622,48,0
chr10	44095030	.	G	GGTATGTAT	12380.22	PASS	AB=0.697;AC=45;AF=0.833;AN=54;BaseQRankSum=0.519;DP=770;FS=1.262;HRun=0;HaplotypeScore=211.7061;InbreedingCoeff=0.1592;MQ=73.58;MQ0=2;MQRankSum=1.443;QD=18.23;ReadPosRankSum=0.687;VQSLOD=4.1227;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:28,6:38:15.03:513,15,0	1/1:3,0:7:5.99:49,6,0	0/0:42,0:29:6.02:0,6,103	0/0:43,0:35:0.67:0,1,94	1/1:23,6:33:15.47:318,15,0	0/1:9,0:23:44.62:190,0,45	1/1:19,0:30:17.96:146,18,0	1/1:43,0:43:18.06:435,18,0	1/1:16,0:36:38.91:317,39,0	1/1:18,9:29:36.11:1256,36,0	1/1:11,4:17:12.91:391,13,0	1/1:13,0:27:32.96:303,33,0	0/1:13,0:20:45.21:171,0,45	0/1:7,0:20:41.81:241,0,42	1/1:19,10:32:26.95:1084,27,0	1/1:15,4:21:24.04:766,24,0	0/1:23,0:43:31.07:281,0,31	0/1:16,3:20:5.75:418,0,6	1/1:17,3:23:27.08:887,27,0	1/1:12,9:23:24.08:977,24,0	1/1:25,4:32:2.80:24,3,0	1/1:11,0:22:23.96:237,24,0	1/1:22,6:31:18.43:612,18,0	1/1:26,5:34:12.02:391,12,0	1/1:16,7:24:12.02:391,12,0	1/1:24,9:33:36.05:1144,36,0	1/1:11,7:18:21.07:839,21,0	./.
chr10	44095105	.	CGT	C	2317.91	PASS	AB=0.920;AC=41;AF=0.788;AN=52;BaseQRankSum=4.875;DP=624;FS=17.592;HRun=0;HaplotypeScore=120.9942;InbreedingCoeff=0.2116;MQ=69.64;MQ0=9;MQRankSum=0.236;QD=4.46;ReadPosRankSum=1.618;VQSLOD=1.9762;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:39,0:45:31.15:152,31,0	1/1:2,1:3:3.01:33,3,0	./.	./.	1/1:11,3:15:14.86:137,15,0	0/1:9,1:10:26.72:27,0,39	0/1:29,0:29:5.68:6,0,290	1/1:23,0:23:6.01:59,6,0	0/1:26,0:26:8.68:9,0,226	1/1:12,1:13:3.01:33,3,0	1/1:9,1:10:5.87:65,6,0	0/1:24,1:25:2.77:3,0,311	0/0:26,0:26:42.10:0,42,600	0/1:29,1:31:0.43:0,0,356	1/1:23,9:33:50.59:488,51,0	1/1:14,7:20:30.07:320,30,0	1/1:29,7:37:28.84:433,29,0	0/1:16,12:27:25.13:210,0,25	1/1:25,0:25:5.68:28,6,0	1/1:13,0:14:2.84:14,3,0	1/1:28,0:30:11.41:64,11,0	1/1:12,2:14:6.01:65,6,0	0/0:24,0:26:20.66:0,21,272	0/1:36,4:40:99:124,0,666	1/1:4,1:8:5.85:47,6,0	1/1:14,0:19:11.36:56,11,0	1/1:11,0:14:14.20:70,14,0	1/1:0,0:2:5.68:28,6,0
chr10	44095679	.	T	TG	15393.75	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-9.229;DP=734;FS=0.929;HRun=5;HaplotypeScore=77.9145;InbreedingCoeff=0.9999;MQ=81.77;MQ0=0;MQRankSum=-4.534;QD=33.54;ReadPosRankSum=3.652;VQSLOD=5.2565;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,47:50:99:1657,126,0	0/0:18,0:18:51.13:0,51,548	0/0:24,0:24:53.98:0,54,568	0/0:23,0:23:54.12:0,54,573	1/1:0,25:25:63.16:809,63,0	0/0:20,0:20:57.14:0,57,609	0/0:14,0:14:39.10:0,39,419	0/0:38,0:38:99:0,102,1090	0/0:35,0:35:99:0,102,1076	0/0:24,0:24:63.16:0,63,677	0/0:21,0:21:63.14:0,63,668	1/1:0,27:27:72.23:947,72,0	1/1:1,14:15:36.12:473,36,0	1/1:0,25:25:63.20:829,63,0	1/1:3,32:35:81.26:1066,81,0	1/1:0,18:18:51.17:671,51,0	0/0:23,0:23:57.12:0,57,604	1/1:2,23:25:69.22:908,69,0	1/1:2,24:26:72.16:908,72,0	1/1:1,28:29:75.24:987,75,0	1/1:10,33:43:99:1398,111,0	1/1:4,20:24:57.19:749,57,0	1/1:0,17:17:51.17:671,51,0	1/1:1,36:37:96.31:1263,96,0	0/0:35,0:35:96.21:0,96,1021	1/1:4,28:32:52.02:1033,52,0	1/1:0,18:18:45.15:592,45,0	1/1:0,13:13:33.11:434,33,0
chr10	44097300	.	G	GT	3515.15	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-6.142;DP=612;FS=9.196;HRun=11;HaplotypeScore=89.8964;InbreedingCoeff=0.8415;MQ=72.24;MQ0=1;MQRankSum=2.793;QD=18.70;ReadPosRankSum=1.365;VQSLOD=4.1938;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:65.72:0,66,508	0/0:8,0:8:17.91:0,18,139	0/0:35,0:26:2.99:0,3,115	0/0:17,0:15:5.70:0,6,102	0/0:30,0:31:49.08:0,49,491	0/0:14,0:14:35.85:0,36,279	0/0:16,1:19:6.47:0,6,213	0/0:9,0:27:13.79:0,14,76	0/0:36,0:36:62.60:0,63,638	0/0:3,0:29:50.91:0,51,146	0/0:1,0:20:36.66:0,37,106	1/1:2,15:17:33.07:335,33,0	1/1:4,19:23:1.62:380,2,0	1/1:5,16:22:30.70:471,31,0	1/1:8,14:22:46.78:447,47,0	1/1:3,9:12:3.84:220,4,0	0/0:23,0:24:61.79:0,62,470	1/1:4,13:18:2.97:245,3,0	0/0:15,0:15:41.83:0,42,323	0/0:20,2:22:14.19:0,14,293	0/0:14,0:14:32.84:0,33,252	1/1:6,19:25:43.33:427,43,0	1/1:6,18:24:47.99:474,48,0	1/1:5,20:25:51.10:518,51,0	0/0:3,0:22:36.65:0,37,106	0/0:19,0:20:52.82:0,53,398	0/0:29,1:30:47.24:0,47,549	0/0:13,1:14:11.43:0,11,271
chr10	44097562	.	G	GCTTTATATGGGT	51962.04	PASS	AB=0.603;AC=32;AF=0.571;AN=56;BaseQRankSum=4.660;DP=684;FS=3.473;HRun=0;HaplotypeScore=253.4935;InbreedingCoeff=0.8515;MQ=85.13;MQ0=3;MQRankSum=-19.930;QD=126.12;ReadPosRankSum=-0.436;VQSLOD=4.7161;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:22,17:37:78.27:3885,78,0	0/0:8,0:8:24.08:0,24,894	0/0:30,0:30:72.25:0,72,2339	0/0:30,0:30:64.98:0,65,1975	1/1:8,18:25:54.17:2888,54,0	0/0:24,0:24:63.22:0,63,2290	0/0:25,0:25:75.24:0,75,2630	0/0:37,0:37:99:0,99,3301	0/0:24,0:24:66.20:0,66,2195	0/0:22,0:22:63.22:0,63,2192	0/0:11,0:11:33.11:0,33,1198	1/1:11,12:24:63.22:3448,63,0	1/1:16,11:27:81.28:4038,81,0	1/1:14,19:33:96.33:5205,96,0	1/1:10,12:22:60.19:3208,60,0	0/1:9,18:27:30.65:4022,0,31	0/0:36,0:36:99:0,105,3856	1/1:11,7:18:36.12:1809,36,0	1/1:20,1:21:57.18:2523,57,0	1/1:9,12:20:54.19:2933,54,0	1/1:17,6:23:48.16:2246,48,0	1/1:19,14:32:87.26:3924,87,0	1/1:10,10:19:42.13:2006,42,0	1/1:9,3:12:25.81:1154,26,0	0/0:25,0:24:69.22:0,69,2332	0/1:8,15:23:45.71:3221,0,46	1/1:24,13:38:99:4738,99,0	1/1:2,3:5:15.05:713,15,0
chr10	44097605	.	CT	C	12096.10	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=19.368;DP=625;FS=3.540;HRun=2;HaplotypeScore=178.5621;InbreedingCoeff=0.9812;MQ=86.20;MQ0=0;MQRankSum=-13.455;QD=32.52;ReadPosRankSum=5.915;VQSLOD=4.0495;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,35:34:84.27:1088,84,0	0/0:6,0:6:15.05:0,15,225	0/0:31,0:31:90.18:0,90,1228	0/0:21,0:21:53.88:0,54,735	1/1:1,20:21:48.16:622,48,0	0/0:20,0:20:60.20:0,60,899	0/0:23,0:23:69.21:0,69,1008	0/0:33,0:33:93.28:0,93,1323	0/0:23,0:23:69.23:0,69,1014	0/0:28,0:28:84.28:0,84,1259	0/0:12,0:12:33.10:0,33,469	1/1:4,25:29:72.23:934,72,0	1/1:1,19:20:57.19:739,57,0	1/1:4,17:21:57.18:733,57,0	1/1:1,16:17:48.16:622,48,0	1/1:2,24:26:27.26:850,27,0	0/0:30,0:30:90.30:0,90,1343	1/1:1,18:19:45.15:583,45,0	1/1:1,14:15:36.10:453,36,0	1/1:0,16:16:45.15:584,45,0	1/1:4,13:17:36.12:466,36,0	1/1:4,28:32:84.27:1089,84,0	1/1:1,27:28:75.24:973,75,0	1/1:0,18:18:41.81:543,42,0	0/0:26,0:25:75.23:0,75,1102	1/1:4,18:22:9.19:617,9,0	1/1:3,28:31:84.27:1086,84,0	1/1:1,3:4:9.03:117,9,0
chr10	44097731	.	TC	T	295.04	PASS	AB=0.953;AC=10;AF=0.185;AN=54;BaseQRankSum=-4.859;DP=471;FS=8.172;HRun=11;HaplotypeScore=97.8061;InbreedingCoeff=0.4579;MQ=74.06;MQ0=0;MQRankSum=2.383;QD=2.46;ReadPosRankSum=-1.724;VQSLOD=-0.4861;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:61.13:0,61,375	0/0:4,0:4:9.01:0,9,89	0/0:11,0:10:12:0,12,107	0/1:17,0:17:31.35:31,0,88	0/0:8,0:8:14.46:0,14,84	0/0:13,0:13:21.03:0,21,210	0/1:18,3:22:10.29:10,0,264	1/1:10,9:21:25.74:202,26,0	0/1:13,1:14:0.60:1,0,187	1/1:4,7:11:20.89:163,21,0	./.	0/0:23,0:23:48.71:0,49,270	0/0:19,0:19:34.70:0,35,228	0/0:23,0:23:44.08:0,44,301	0/0:26,0:26:63.28:0,63,369	0/0:24,0:24:64.04:0,64,387	0/1:24,0:24:5.81:6,0,298	0/0:21,0:21:54.81:0,55,301	0/0:18,0:18:38.38:0,38,195	0/0:10,0:10:19.97:0,20,106	0/0:34,0:34:80.55:0,81,448	0/0:5,0:5:8.79:0,9,64	0/0:11,0:11:23.20:0,23,134	0/0:31,0:31:72.04:0,72,397	1/1:9,2:11:2.94:25,3,0	0/0:17,0:17:18.61:0,19,214	0/0:23,0:23:61.68:0,62,389	0/0:2,0:2:2.94:0,3,18
chr10	44099089	.	T	TA	5449.14	PASS	AB=1.000;AC=30;AF=0.536;AN=56;BaseQRankSum=9.281;DP=439;FS=18.044;HRun=7;HaplotypeScore=60.7432;InbreedingCoeff=0.8193;MQ=70.17;MQ0=1;MQRankSum=1.151;QD=23.39;ReadPosRankSum=1.949;VQSLOD=3.4106;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,22:24:60.12:686,60,0	0/0:13,0:13:33.02:0,33,311	0/0:12,0:8:0.34:0,0,87	0/0:6,0:6:13.77:0,14,87	1/1:2,13:15:36.54:414,37,0	0/0:15,0:15:33.03:0,33,312	0/0:14,0:14:42.07:0,42,405	0/0:27,0:27:81.08:0,81,757	0/0:19,0:19:51.01:0,51,465	0/0:20,0:20:42.05:0,42,402	0/0:23,0:23:57:0,57,529	1/1:5,6:11:21.71:258,22,0	1/1:4,15:19:42.60:503,43,0	1/1:0,6:6:12.04:143,12,0	0/1:11,0:11:2.42:58,0,2	0/1:14,0:14:5.92:6,0,23	0/0:24,0:24:60.06:0,60,564	0/0:17,0:17:0.81:0,1,28	1/1:4,18:22:56.87:586,57,0	1/1:1,16:17:48.08:541,48,0	1/1:0,9:9:21.06:249,21,0	1/1:1,11:12:30.01:325,30,0	1/1:2,13:14:27.01:301,27,0	1/1:3,6:9:17.67:173,18,0	0/0:16,0:16:36.05:0,36,347	1/1:5,14:19:41.49:471,41,0	1/1:1,11:12:30.06:342,30,0	1/1:0,18:18:33.10:393,33,0
chr10	44099189	.	T	TC	1972.34	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=8.048;DP=311;FS=6.908;HRun=1;HaplotypeScore=37.9867;InbreedingCoeff=0.7893;MQ=64.16;MQ0=6;MQRankSum=-7.185;QD=15.29;ReadPosRankSum=0.341;VQSLOD=2.8712;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,8:7:7.92:124,8,0	0/0:8,0:8:24.08:0,24,320	0/0:21,0:15:10.36:0,10,414	0/0:23,0:17:17.52:0,18,419	1/1:0,10:10:9.03:122,9,0	0/0:14,0:14:33.11:0,33,458	0/0:19,0:19:54.14:0,54,731	0/0:21,0:19:54.15:0,54,707	0/0:12,0:12:26.96:0,27,376	0/0:13,0:13:39.13:0,39,543	0/0:13,0:13:39.13:0,39,543	1/1:0,7:5:3.01:41,3,0	1/1:0,3:1:3.01:41,3,0	1/1:0,5:1:3.01:40,3,0	1/1:3,8:9:3.48:44,3,0	1/1:0,4:3:6.02:84,6,0	0/0:24,0:23:69.23:0,69,963	1/1:0,4:3:6.02:81,6,0	1/1:2,5:7:15.05:209,15,0	1/1:4,8:12:12.02:148,12,0	1/1:0,6:4:6.02:81,6,0	1/1:0,7:7:12.04:164,12,0	1/1:0,11:11:18.06:242,18,0	1/1:0,4:4:9.03:122,9,0	0/0:11,0:11:30.10:0,30,420	1/1:0,11:11:30.08:405,30,0	1/1:1,11:9:15.02:189,15,0	1/1:4,2:6:3.01:41,3,0
chr10	44099907	.	GA	G	17395.47	PASS	AB=0.519;AC=33;AF=0.589;AN=56;BaseQRankSum=11.491;DP=735;FS=1.609;HRun=2;HaplotypeScore=76.2692;InbreedingCoeff=0.9356;MQ=73.33;MQ0=0;MQRankSum=-2.048;QD=35.87;ReadPosRankSum=2.601;VQSLOD=5.5640;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,57:59:99:2181,169,0	0/0:11,0:11:33.11:0,33,495	0/0:22,0:21:21.25:0,21,635	0/0:20,0:20:57.18:0,57,778	1/1:1,26:27:81.25:1036,81,0	0/0:19,0:19:57.19:0,57,854	0/0:24,0:24:72.24:0,72,1079	0/0:26,0:26:75.24:0,75,1090	0/0:26,0:26:69.22:0,69,1012	0/0:29,0:29:87.27:0,87,1251	0/0:21,0:21:60.19:0,60,879	1/1:1,27:28:81.26:1051,81,0	1/1:1,18:19:54.18:700,54,0	1/1:0,30:30:84.27:1090,84,0	1/1:1,27:28:78.25:1013,78,0	1/1:2,31:33:48.34:1124,48,0	0/0:29,0:29:87.29:0,87,1292	1/1:0,20:20:57.19:740,57,0	1/1:0,28:28:84.24:1049,84,0	1/1:1,22:23:59.99:735,60,0	1/1:0,35:35:99:1323,102,0	1/1:0,23:23:66.21:857,66,0	1/1:1,22:23:50.96:662,51,0	1/1:0,29:29:78.25:1013,78,0	0/0:23,0:23:69.22:0,69,1013	0/1:2,25:27:7.97:876,0,8	1/1:1,35:36:99:1285,99,0	1/1:0,17:17:51.17:662,51,0
chr10	44101454	.	CCT	C	6972.26	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=13.676;DP=623;FS=15.471;HRun=0;HaplotypeScore=132.7086;InbreedingCoeff=0.9932;MQ=62.48;MQ0=8;MQRankSum=-0.602;QD=22.35;ReadPosRankSum=1.914;VQSLOD=4.5277;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,24:25:32.28:382,32,0	0/0:7,0:7:18.06:0,18,299	0/0:53,0:27:57.17:0,57,916	0/0:54,0:24:28.87:0,29,519	1/1:2,13:15:35.78:317,36,0	0/0:28,0:28:66.18:0,66,1084	0/0:31,0:31:71.04:0,71,1149	0/0:34,0:34:84.27:0,84,1345	0/0:21,0:21:60.20:0,60,996	0/0:22,0:22:56.40:0,56,932	0/0:15,0:15:36.09:0,36,555	1/1:5,20:25:38.18:403,38,0	1/1:2,15:17:40.55:545,41,0	1/1:2,14:16:29.79:347,30,0	1/1:6,14:20:29.85:376,30,0	1/1:1,13:14:27.09:354,27,0	0/0:28,0:28:60.18:0,60,994	1/1:3,7:10:17.65:207,18,0	1/1:4,14:16:42.14:546,42,0	1/1:2,13:15:35.69:315,36,0	1/1:4,24:27:48.64:567,49,0	1/1:3,17:20:44.09:479,44,0	1/1:4,15:18:17.77:212,18,0	1/1:1,23:24:42.02:552,42,0	0/0:18,0:18:45.15:0,45,744	1/1:4,21:25:17.74:793,18,0	1/1:2,7:9:17.59:217,18,0	1/1:3,8:11:29.83:361,30,0
chr10	44101473	.	CGT	C	469.25	PASS	AB=1.000;AC=8;AF=0.143;AN=56;BaseQRankSum=0.321;DP=645;FS=0.000;HRun=0;HaplotypeScore=169.9910;InbreedingCoeff=0.2097;MQ=53.82;MQ0=15;MQRankSum=-0.861;QD=3.35;ReadPosRankSum=-2.015;VQSLOD=2.2840;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:26:8.29:0,8,65	0/0:11,0:11:9.03:0,9,137	0/0:38,0:14:15:0,15,194	0/1:37,0:14:2.28:2,0,47	1/1:15,0:14:1.55:4,2,0	0/0:30,0:29:64.48:0,64,731	0/0:27,0:27:29.02:0,29,382	1/1:15,19:32:55.10:550,55,0	0/0:24,1:23:41.33:0,41,424	0/0:24,1:23:3.54:0,4,291	0/1:12,0:12:5.15:5,0,166	0/0:24,0:24:3.65:0,4,74	0/1:20,0:20:13.92:14,0,74	0/0:19,0:19:1.24:0,1,166	0/0:16,0:19:14.69:0,15,129	0/0:18,0:20:14.94:0,15,146	0/0:30,0:30:26.42:0,26,573	0/0:11,0:11:8.50:0,8,81	0/0:15,0:15:14.87:0,15,136	0/0:18,0:20:5.99:0,6,50	0/0:30,0:30:11.38:0,11,115	0/1:22,0:22:11.33:11,0,52	0/0:25,0:24:4.56:0,5,48	0/0:30,0:30:21.92:0,22,237	0/0:18,0:17:30.10:0,30,446	0/0:27,0:28:19.44:0,19,178	0/0:11,0:11:2.86:0,3,10	0/0:18,0:18:26.98:0,27,257
chr10	44101492	.	GTGTA	G	2264.26	PASS	AB=0.989;AC=26;AF=0.464;AN=56;BaseQRankSum=5.538;DP=598;FS=1.292;HRun=0;HaplotypeScore=162.8124;InbreedingCoeff=-0.7364;MQ=51.17;MQ0=21;MQRankSum=1.379;QD=4.22;ReadPosRankSum=-5.572;VQSLOD=0.5949;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:26:15.63:170,0,16	0/0:11,0:11:8.91:0,9,153	0/0:17,0:5:2.11:0,2,35	0/1:17,0:5:15.43:15,0,21	1/1:15,0:13:11.28:71,11,0	0/0:34,0:33:2.70:0,3,245	0/1:24,0:25:41.27:41,0,220	0/1:35,0:33:67.47:177,0,67	0/1:23,0:21:37.17:37,0,176	0/1:19,0:16:27.13:27,0,117	0/1:13,0:13:12.90:13,0,108	0/1:24,0:24:49.04:155,0,49	0/1:22,0:22:29.25:232,0,29	0/1:17,0:17:99:99,0,118	0/1:16,0:16:66.16:66,0,155	0/1:18,0:18:49.82:50,0,227	0/1:23,6:28:0.88:1,0,593	0/1:16,0:14:76.32:76,0,155	0/1:17,0:16:99:112,0,220	0/1:19,0:19:28.01:41,0,28	0/1:31,0:29:74.90:190,0,75	0/1:20,0:20:9.19:177,0,9	0/1:23,0:22:43.95:71,0,44	0/1:29,0:28:99:139,0,177	0/1:21,0:19:32.29:32,0,218	0/1:27,0:25:99:284,0,196	0/1:14,0:13:27.50:117,0,27	0/1:15,0:14:20.59:21,0,338
chr10	44101494	.	GTA	G	2952.92	PASS	AB=0.977;AC=32;AF=0.571;AN=56;BaseQRankSum=5.609;DP=580;FS=0.395;HRun=0;HaplotypeScore=141.8145;InbreedingCoeff=-0.3678;MQ=51.34;MQ0=20;MQRankSum=0.955;QD=5.65;ReadPosRankSum=-4.741;VQSLOD=1.4294;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:26:28.04:244,28,0	0/0:11,0:11:8.90:0,9,101	0/0:14,0:3:2.11:0,2,35	0/1:15,0:4:14.90:15,0,28	1/1:15,0:13:11.28:71,11,0	0/0:31,1:31:24.15:0,24,274	0/1:24,0:24:52.94:53,0,167	0/1:35,0:33:70.67:177,0,71	0/1:22,0:20:73.19:73,0,106	0/1:17,0:14:56.59:57,0,100	0/1:6,7:13:29.15:29,0,83	1/1:24,0:24:2.23:175,2,0	1/1:19,2:21:32.50:326,32,0	0/1:17,0:17:18.09:134,0,18	0/1:14,0:14:62.21:70,0,62	0/1:17,0:17:73.32:73,0,102	0/1:29,0:28:11.82:12,0,399	0/1:16,0:14:77.30:77,0,96	0/1:17,0:16:99:110,0,116	0/1:18,0:18:3.41:41,0,3	1/1:32,0:30:8.51:261,9,0	1/1:20,0:20:24.23:261,24,0	1/1:21,1:21:1.56:109,2,0	0/1:28,2:29:20.09:226,0,20	0/1:21,0:19:41.54:42,0,193	0/1:25,0:23:69.70:310,0,70	0/1:14,0:13:3.61:119,0,4	0/1:15,0:14:51.30:51,0,104
chr10	44101496	.	ATGTGTG	A	88.24	PASS	AB=1.000;AC=5;AF=0.096;AN=52;BaseQRankSum=-0.285;DP=571;FS=12.894;HRun=0;HaplotypeScore=180.8043;InbreedingCoeff=0.1948;MQ=51.23;MQ0=22;MQRankSum=0.999;QD=0.91;ReadPosRankSum=-3.371;VQSLOD=0.8590;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:26:17.77:0,18,209	0/0:11,0:11:12.04:0,12,271	./.	./.	0/0:15,0:13:6.05:0,6,25	1/1:18,13:30:8.84:142,9,0	0/0:21,0:23:19.66:0,20,207	0/0:34,0:32:17.94:0,18,184	0/0:20,0:20:12.03:0,12,221	0/0:10,0:12:11.69:0,12,151	0/0:13,0:13:6.02:0,6,82	0/1:24,0:24:28.14:28,0,169	0/1:19,0:19:20.64:21,0,168	0/0:16,0:16:15.50:0,15,314	0/0:13,0:13:17.82:0,18,421	0/0:17,0:17:30:0,30,574	0/0:29,0:28:35.69:0,36,720	0/0:15,0:13:21.07:0,21,409	0/0:20,0:19:30.06:0,30,551	0/0:15,0:15:5.54:0,6,100	0/0:31,0:29:20.76:0,21,369	0/1:23,0:23:9.04:9,0,142	0/0:23,0:22:6.59:0,7,164	0/0:32,0:31:19.87:0,20,517	0/0:19,0:17:6.46:0,6,61	0/0:23,0:22:21.06:0,21,486	0/0:14,0:13:11.21:0,11,141	0/0:15,0:14:31.82:0,32,791
chr10	44102337	.	TC	T	16051.79	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=16.745;DP=727;FS=0.919;HRun=3;HaplotypeScore=103.3610;InbreedingCoeff=0.9994;MQ=79.39;MQ0=0;MQRankSum=-3.845;QD=33.72;ReadPosRankSum=5.685;VQSLOD=4.5171;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,50:52:99:1709,138,0	0/0:9,0:9:24.08:0,24,345	0/0:24,0:24:66.05:0,66,841	0/0:27,0:27:65.05:0,65,752	1/1:0,27:27:81.20:985,81,0	0/0:19,0:19:57.19:0,57,820	0/0:24,0:24:69.20:0,69,955	0/0:27,0:26:75.24:0,75,1063	0/0:18,0:18:54.18:0,54,768	0/0:28,0:28:84.28:0,84,1189	0/0:26,0:26:78.23:0,78,1085	1/1:1,25:26:66.17:801,66,0	1/1:1,26:27:72.23:892,72,0	1/1:0,25:25:69.22:854,69,0	1/1:1,35:36:99:1300,105,0	1/1:2,24:26:69.22:854,69,0	0/0:31,0:31:84.24:0,84,1155	1/1:1,19:20:33.38:611,33,0	1/1:0,18:18:54.15:655,54,0	1/1:2,34:36:99:1247,102,0	1/1:0,27:27:75.24:929,75,0	1/1:0,20:20:57.14:689,57,0	1/1:0,25:25:72.13:891,72,0	1/1:1,45:46:99:1560,126,0	0/0:18,0:18:54.18:0,54,777	1/1:2,27:29:41.07:960,41,0	1/1:1,25:26:66.21:817,66,0	1/1:2,8:10:24.07:297,24,0
chr10	44104528	.	AACACACACACACACACAC	A	6383.63	PASS	AB=0.906;AC=33;AF=0.635;AN=52;BaseQRankSum=6.418;DP=565;FS=0.000;HRun=0;HaplotypeScore=253.4085;InbreedingCoeff=0.3901;MQ=52.91;MQ0=17;MQRankSum=-4.584;QD=16.50;ReadPosRankSum=1.657;VQSLOD=3.5242;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:21,17:38:0.03:262,0,0	0/0:5,0:5:12.04:0,12,702	./.	./.	1/1:18,2:21:17.98:430,18,0	0/0:15,0:15:21.05:0,21,875	0/0:20,0:21:42.49:0,42,1957	0/0:19,0:20:13.84:0,14,85	0/0:9,0:9:11.97:0,12,628	0/1:16,0:20:20.97:213,0,21	0/1:9,0:9:4.95:32,0,5	0/1:12,1:13:18.48:179,0,18	1/1:12,3:15:12:461,12,0	1/1:14,2:16:17.48:354,17,0	1/1:7,11:17:12.51:584,13,0	1/1:10,11:23:18.06:799,18,0	0/0:20,0:22:42.86:0,43,1926	0/1:20,1:21:53.64:168,0,54	1/1:12,1:11:1.99:144,2,0	0/1:13,0:13:10:17,0,10	1/1:38,0:33:11.92:91,12,0	1/1:17,5:23:26.99:919,27,0	1/1:9,14:24:9.92:419,10,0	1/1:25,2:26:11.95:339,12,0	0/1:8,0:8:11.27:11,0,26	1/1:20,2:22:24.13:525,24,0	1/1:6,8:15:6.02:271,6,0	1/1:4,1:5:5.98:166,6,0
chr10	44104646	.	AC	A	16312.72	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=13.104;DP=685;FS=0.591;HRun=1;HaplotypeScore=87.0196;InbreedingCoeff=0.9991;MQ=91.97;MQ0=3;MQRankSum=-1.925;QD=38.84;ReadPosRankSum=3.906;VQSLOD=5.3469;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,52:52:99:2055,147,0	0/0:8,0:8:24.08:0,24,380	0/0:27,0:27:71.42:0,71,1147	0/0:31,0:31:49.66:0,50,1318	1/1:0,22:22:66.13:879,66,0	0/0:21,0:21:63.21:0,63,1007	0/0:24,0:24:72.23:0,72,1127	0/0:33,0:33:99:0,99,1550	0/0:26,0:26:72.25:0,72,1142	0/0:28,0:28:84.28:0,84,1322	0/0:17,0:17:51.17:0,51,813	1/1:0,17:17:45.15:629,45,0	1/1:0,23:23:66.22:923,66,0	1/1:0,17:17:48.16:671,48,0	1/1:0,33:33:93.31:1301,93,0	1/1:0,30:30:84.28:1175,84,0	0/0:28,0:28:84.26:0,84,1285	1/1:0,10:10:21.07:294,21,0	1/1:0,15:15:45.15:629,45,0	1/1:0,33:31:90.30:1258,90,0	1/1:0,32:32:93.31:1300,93,0	1/1:0,27:27:66.22:923,66,0	1/1:0,23:22:63.21:881,63,0	1/1:0,20:20:54.18:755,54,0	0/0:22,0:22:66.22:0,66,1051	1/1:0,34:34:99:1424,102,0	1/1:0,20:20:51.17:713,51,0	1/1:0,12:12:36.12:503,36,0
chr10	44104867	.	CGTAT	C	11356.10	PASS	AB=0.726;AC=44;AF=0.786;AN=56;BaseQRankSum=-6.078;DP=764;FS=2.967;HRun=0;HaplotypeScore=139.5879;InbreedingCoeff=0.6898;MQ=59.13;MQ0=7;MQRankSum=0.435;QD=18.05;ReadPosRankSum=3.751;VQSLOD=4.7202;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:24,20:44:48.16:762,48,0	1/1:2,5:6:9.03:143,9,0	0/0:23,0:15:3.58:0,4,56	0/0:24,0:19:6.02:0,6,123	1/1:16,28:44:63.21:991,63,0	0/0:10,0:20:24.08:0,24,414	0/0:16,0:30:18.06:0,18,325	0/1:27,0:42:30.39:30,0,88	0/0:14,0:37:54.18:0,54,953	1/1:9,0:24:26.02:298,26,0	1/1:12,0:21:10.57:88,11,0	1/1:5,16:21:42.14:667,42,0	1/1:13,14:27:30.10:476,30,0	1/1:9,24:33:60.20:952,60,0	1/1:16,30:46:66.22:1048,66,0	1/1:16,16:32:36.12:572,36,0	1/1:11,15:27:36.08:544,36,0	1/1:6,12:18:21.07:321,21,0	1/1:10,3:13:8.83:143,9,0	1/1:8,18:25:36.12:571,36,0	1/1:15,18:32:33.11:522,33,0	1/1:5,17:22:36.12:565,36,0	1/1:11,19:30:48.16:753,48,0	0/1:17,12:30:28.38:310,0,28	1/1:8,0:21:14.11:97,14,0	1/1:14,18:32:54.18:837,54,0	1/1:9,11:20:24.08:381,24,0	1/1:8,8:15:18.06:286,18,0
chr10	44106232	.	AC	A	8432.47	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=15.332;DP=680;FS=0.000;HRun=1;HaplotypeScore=64.5270;InbreedingCoeff=0.9999;MQ=91.05;MQ0=0;MQRankSum=-5.849;QD=36.98;ReadPosRankSum=-0.052;VQSLOD=4.9734;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,117,1830	1/1:0,15:15:36.12:503,36,0	0/0:26,0:26:75.22:0,75,1129	0/0:26,0:26:72.06:0,72,1051	0/0:27,0:27:81.25:0,81,1247	0/0:24,0:24:72.25:0,72,1146	0/0:23,0:23:69.20:0,69,1053	1/1:0,49:49:99:1945,147,0	0/0:23,0:23:69.21:0,69,1054	1/1:0,28:28:84.26:1155,84,0	1/1:0,31:31:90.21:1223,90,0	0/0:13,0:13:39.13:0,39,623	0/0:18,0:18:54.18:0,54,860	0/0:17,0:17:51.16:0,51,789	1/1:0,27:27:66.22:922,66,0	1/1:0,19:19:51.17:713,51,0	1/1:0,26:26:63.21:881,63,0	1/1:0,16:16:36.12:503,36,0	0/0:17,0:17:51.16:0,51,790	0/0:19,0:19:57.19:0,57,907	0/0:23,0:23:69.18:0,69,1028	0/0:26,0:26:78.21:0,78,1190	0/0:27,0:27:78.27:0,78,1245	0/0:18,0:18:54.12:0,54,810	1/1:0,17:17:42.14:587,42,0	0/0:30,2:32:33.39:0,33,1352	0/0:31,0:31:93.30:0,93,1460	0/0:23,0:23:69.24:0,69,1103
chr10	44109115	.	ACCT	A	3078.90	PASS	AB=0.737;AC=9;AF=0.161;AN=56;BaseQRankSum=11.897;DP=816;FS=14.699;HRun=0;HaplotypeScore=114.5914;InbreedingCoeff=0.0656;MQ=47.94;MQ0=112;MQRankSum=-10.758;QD=12.78;ReadPosRankSum=3.012;VQSLOD=2.6080;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:50:99:0,123,2769	0/1:12,6:10:49.63:296,0,50	0/0:34,0:12:34:0,34,682	0/0:31,0:7:18.06:0,18,384	0/0:14,0:14:39.11:0,39,824	0/0:24,0:24:60.19:0,60,1365	0/0:42,0:38:99:0,104,2202	0/0:38,0:21:57.18:0,57,1261	0/0:24,0:22:60.13:0,60,1313	0/1:30,11:23:99:419,0,652	1/1:10,10:13:15.05:264,15,0	0/0:34,0:34:90.31:0,90,2051	0/0:22,0:22:60.16:0,60,1334	0/0:24,0:24:63.22:0,63,1470	0/1:13,16:25:29.21:627,0,29	0/1:19,9:21:99:430,0,375	0/1:25,12:24:99:483,0,256	0/1:20,10:18:99:311,0,369	0/0:20,0:13:36.12:0,36,832	0/0:13,0:11:24.08:0,24,567	0/0:65,0:58:99:0,147,3366	0/0:17,0:15:45.10:0,45,1011	0/0:13,0:12:21.04:0,21,428	0/0:49,0:47:99:0,135,3148	0/1:23,15:20:44.75:395,0,45	0/0:23,0:23:63.17:0,63,1421	0/0:21,0:19:48.12:0,48,1084	0/0:14,0:13:36.12:0,36,794
chr10	44109403	.	CTT	C	567.25	PASS	AB=0.728;AC=8;AF=0.143;AN=56;BaseQRankSum=7.809;DP=569;FS=0.728;HRun=3;HaplotypeScore=100.6795;InbreedingCoeff=0.1019;MQ=61.88;MQ0=17;MQRankSum=-3.112;QD=7.46;ReadPosRankSum=4.614;VQSLOD=0.4018;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:34:84.22:0,84,1549	0/0:3,1:2:3.01:0,3,47	0/0:20,0:17:44.80:0,45,780	0/0:23,0:18:40.67:0,41,645	0/0:9,0:9:24.08:0,24,464	0/0:12,0:11:33.08:0,33,581	0/0:43,0:43:99:0,123,2332	0/0:9,0:4:12.04:0,12,231	0/0:31,0:31:78.26:0,78,1469	0/1:11,3:13:95.28:95,0,283	1/1:4,4:7:10.98:91,11,0	0/0:22,0:22:54.19:0,54,1020	0/0:18,0:18:45.15:0,45,858	0/0:24,0:23:60:0,60,1149	0/1:6,4:10:85.99:86,0,102	0/1:5,4:7:73.58:74,0,117	0/1:3,4:6:31.61:82,0,32	0/1:9,7:14:99:213,0,184	0/0:13,0:13:39.13:0,39,715	0/0:14,0:14:39.02:0,39,641	0/0:99,0:97:99:0,280,5226	0/0:15,0:15:33.11:0,33,633	0/0:12,0:12:33.11:0,33,637	0/0:50,0:49:99:0,135,2605	0/1:8,2:7:11.07:65,0,11	0/0:21,0:21:60.17:0,60,1102	0/0:10,0:10:27.09:0,27,520	0/0:6,0:6:15.05:0,15,270
chr10	44109407	.	C	CA	614.15	PASS	AB=0.713;AC=8;AF=0.143;AN=56;BaseQRankSum=7.913;DP=552;FS=0.000;HRun=0;HaplotypeScore=95.8647;InbreedingCoeff=0.0455;MQ=61.87;MQ0=12;MQRankSum=-3.900;QD=9.03;ReadPosRankSum=3.795;VQSLOD=3.7968;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:30:81.27:0,81,1125	0/0:3,1:2:3.01:0,3,42	0/0:20,0:16:46.50:0,47,534	0/0:20,0:18:34.07:0,34,461	0/0:9,0:9:24.08:0,24,335	0/0:13,0:12:15.46:0,15,396	0/0:45,0:45:99:0,123,1689	0/0:7,0:4:12.02:0,12,150	0/0:30,0:30:87.29:0,87,1207	0/1:10,3:12:99:107,0,144	1/1:4,4:6:5.01:88,5,0	0/0:23,0:23:51.17:0,51,712	0/0:17,0:17:42.14:0,42,585	0/0:23,0:23:56.93:0,57,794	0/1:6,4:9:65.41:97,0,65	0/1:5,4:7:63.59:85,0,64	0/1:2,4:6:26.83:88,0,27	0/1:8,7:14:99:213,0,145	0/0:12,0:12:36.12:0,36,503	0/0:15,0:15:41.50:0,42,541	0/0:102,0:100:99:0,277,3842	0/0:14,0:14:36.11:0,36,485	0/0:12,0:12:33.11:0,33,458	0/0:50,0:49:99:0,141,1880	0/1:5,2:6:29.93:69,0,30	0/0:22,0:22:66.18:0,66,880	0/0:9,0:9:24.08:0,24,332	0/0:5,0:5:15.05:0,15,210
chr10	44109718	.	A	ACTC	317.54	PASS	AB=0.852;AC=7;AF=0.140;AN=50;BaseQRankSum=4.519;DP=569;FS=7.821;HRun=0;HaplotypeScore=81.8004;InbreedingCoeff=0.0311;MQ=51.13;MQ0=50;MQRankSum=-4.616;QD=5.67;ReadPosRankSum=0.082;VQSLOD=1.4516;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:32:63.14:0,63,1049	1/1:2,0:1:3.01:50,3,0	./.	0/0:22,0:2:3.01:0,3,37	0/0:12,0:9:23.46:0,23,331	0/0:11,0:10:24.07:0,24,389	0/0:58,0:57:99:0,162,2681	0/0:6,0:2:6.02:0,6,104	0/0:27,0:26:66.23:0,66,1150	0/1:9,2:6:32.31:112,0,32	./.	0/0:27,0:26:62.88:0,63,1111	0/0:21,0:21:56.85:0,57,930	0/0:35,0:35:96.31:0,96,1651	0/1:7,2:4:35.07:35,0,47	./.	0/1:10,2:10:99:151,0,108	0/1:13,2:11:47.55:48,0,204	0/0:14,0:12:36.10:0,36,567	0/0:6,0:6:8.93:0,9,149	0/0:95,0:90:99:0,209,3557	0/0:14,0:14:33.08:0,33,519	0/0:13,0:12:21.05:0,21,335	0/0:53,0:52:99:0,141,2349	0/1:5,0:4:44.47:44,0,47	0/0:19,0:18:45.13:0,45,731	0/0:12,0:12:24.07:0,24,395	0/0:4,0:3:6.02:0,6,106
chr10	44109720	.	A	ACCT	458.75	PASS	AB=0.917;AC=8;AF=0.160;AN=50;BaseQRankSum=4.904;DP=575;FS=6.669;HRun=0;HaplotypeScore=86.7725;InbreedingCoeff=0.2399;MQ=51.39;MQ0=44;MQRankSum=-5.484;QD=8.66;ReadPosRankSum=-2.465;VQSLOD=1.4175;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:32:55.42:0,55,991	1/1:3,0:2:3.01:70,3,0	./.	0/0:21,0:2:3.01:0,3,44	0/0:14,0:11:20.54:0,21,337	0/0:12,0:11:21.07:0,21,357	0/0:57,0:56:99:0,157,2668	0/0:4,0:2:6.02:0,6,78	0/0:30,0:29:69.17:0,69,1128	1/1:8,0:5:7.84:143,8,0	./.	0/0:27,0:26:65.67:0,66,1123	0/0:21,0:21:54.16:0,54,896	0/0:36,0:36:96.31:0,96,1664	0/1:7,3:5:46.77:65,0,47	./.	0/1:8,1:9:90.37:190,0,90	0/1:15,0:11:54.73:55,0,164	0/0:14,0:12:28.35:0,28,499	0/0:6,0:6:8.93:0,9,149	0/0:95,1:91:99:0,204,3512	0/0:15,0:15:29.93:0,30,496	0/0:13,0:12:18.06:0,18,317	0/0:53,0:52:99:0,132,2283	0/1:8,0:4:46.91:64,0,47	0/0:20,0:19:39.12:0,39,661	0/0:15,0:15:24.06:0,24,395	0/0:4,0:3:8.90:0,9,121
chr10	44110245	.	T	TCCTCAGCCTTCCC	14580.10	PASS	AB=0.917;AC=19;AF=0.339;AN=56;BaseQRankSum=-7.129;DP=960;FS=3.122;HRun=0;HaplotypeScore=306.9854;InbreedingCoeff=0.8905;MQ=81.01;MQ0=0;MQRankSum=-9.280;QD=42.76;ReadPosRankSum=-1.054;VQSLOD=3.6589;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,137,3996	1/1:1,7:9:5.07:382,5,0	0/0:30,0:29:24.59:0,25,543	0/0:31,0:31:69.02:0,69,1251	0/0:21,0:21:54.15:0,54,1744	0/0:15,0:17:39.54:0,40,1021	0/0:31,0:31:87:0,87,2274	1/1:32,0:32:81.12:1550,81,0	0/0:60,0:60:99:0,147,4088	1/1:7,23:37:69.49:1794,69,0	1/1:4,15:22:26.94:1077,27,0	0/0:39,0:39:90.23:0,90,2578	0/0:36,0:36:78.20:0,78,2226	0/0:34,0:34:99:0,99,2396	1/1:4,34:50:33.11:2035,33,0	1/1:6,43:49:47.90:3070,48,0	1/1:26,5:32:66.05:2322,66,0	1/1:8,17:32:12.02:534,12,0	0/0:23,0:23:42.09:0,42,883	0/0:22,0:22:42.09:0,42,1023	0/0:66,0:66:99:0,162,4085	0/0:32,0:32:93.23:0,93,2838	0/0:16,0:16:42.02:0,42,1141	0/0:66,0:66:99:0,170,5133	1/1:5,25:34:24.08:1406,24,0	0/1:40,4:44:99:410,0,2811	0/0:35,0:34:87.22:0,87,2644	0/0:6,0:6:12.03:0,12,367
chr10	44111378	.	GCGTGCA	G	4879.19	PASS	AB=0.858;AC=19;AF=0.339;AN=56;BaseQRankSum=-1.011;DP=555;FS=0.989;HRun=0;HaplotypeScore=163.8127;InbreedingCoeff=0.6610;MQ=53.06;MQ0=8;MQRankSum=-7.523;QD=20.85;ReadPosRankSum=-0.802;VQSLOD=4.4794;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:44.66:0,45,944	1/1:9,0:8:4.10:106,4,0	0/0:9,0:5:7.46:0,7,26	0/0:17,0:10:1.89:0,2,157	0/0:20,0:20:25.78:0,26,519	0/0:22,0:22:57.11:0,57,1878	0/0:15,0:15:45.15:0,45,1511	1/1:19,0:18:41.19:508,41,0	0/0:28,0:28:69.83:0,70,2131	1/1:4,26:29:77.97:1534,78,0	1/1:1,18:19:21.07:480,21,0	0/0:17,0:17:28.89:0,29,433	0/0:14,0:14:35.99:0,36,485	0/0:22,0:22:39.09:0,39,653	1/1:1,22:23:33.36:768,33,0	0/1:9,16:25:70.38:691,0,70	1/1:19,0:19:3.55:24,4,0	1/1:2,8:10:3.01:56,3,0	0/0:15,0:12:32.32:0,32,722	0/0:19,0:19:45.15:0,45,1018	0/0:23,0:22:36.12:0,36,860	0/0:22,0:22:36.17:0,36,340	0/0:11,0:11:20.17:0,20,297	0/1:23,0:23:3.35:3,0,211	1/1:3,28:31:30.10:666,30,0	0/1:25,1:26:43.88:44,0,1524	0/0:16,0:16:33.53:0,34,759	0/0:22,0:22:21.73:0,22,906
chr10	44111379	.	CGT	C	988.70	PASS	AB=0.973;AC=22;AF=0.393;AN=56;BaseQRankSum=5.659;DP=548;FS=0.985;HRun=0;HaplotypeScore=146.6311;InbreedingCoeff=0.4448;MQ=53.00;MQ0=8;MQRankSum=-6.800;QD=3.37;ReadPosRankSum=0.146;VQSLOD=2.7475;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:24.75:0,25,365	1/1:10,0:9:4.06:17,4,0	0/1:10,0:5:3.41:3,0,24	0/1:16,0:10:2.42:2,0,134	0/0:20,0:20:26.08:0,26,260	0/0:23,0:23:60.17:0,60,1090	0/0:15,0:15:45.15:0,45,867	1/1:19,0:18:35.10:284,35,0	0/0:26,0:26:72.15:0,72,1264	1/1:28,1:28:36.28:298,36,0	1/1:18,1:19:18.50:93,18,0	0/0:17,0:17:15.51:0,16,134	0/0:14,0:14:6.76:0,7,169	0/0:22,0:22:30.87:0,31,246	1/1:22,0:22:29.80:152,30,0	0/1:21,3:24:26.23:149,0,26	0/0:18,0:18:8.90:0,9,24	1/1:10,0:10:1.55:4,2,0	0/0:15,0:12:24.62:0,25,332	0/0:19,0:19:45.03:0,45,448	0/0:23,0:22:36.06:0,36,357	0/1:20,1:21:3.54:4,0,57	0/1:11,0:11:2.02:2,0,80	0/1:24,0:24:16.37:16,0,60	1/1:28,1:29:25.58:131,26,0	0/1:26,0:26:10.61:11,0,585	0/0:16,0:16:34.97:0,35,355	0/1:22,0:22:1.06:1,0,360
chr10	44111380	.	GTGCA	G	2946.06	PASS	AB=0.991;AC=21;AF=0.375;AN=56;BaseQRankSum=3.186;DP=542;FS=0.451;HRun=0;HaplotypeScore=152.6101;InbreedingCoeff=0.4948;MQ=52.95;MQ0=8;MQRankSum=-5.001;QD=11.33;ReadPosRankSum=-1.219;VQSLOD=3.1954;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:44.91:0,45,623	1/1:10,0:9:9.28:78,9,0	0/0:10,0:5:4.34:0,4,25	0/0:16,0:10:5.54:0,6,142	0/0:20,0:20:25.56:0,26,351	0/0:23,0:23:60.21:0,60,1609	0/0:15,0:15:45.15:0,45,1231	1/1:1,16:16:44.52:748,45,0	0/0:26,0:26:72.08:0,72,1841	1/1:27,1:27:75.29:911,75,0	1/1:19,0:19:20.99:212,21,0	0/0:17,0:17:1.84:0,2,185	0/0:14,0:14:20.50:0,20,231	0/0:22,0:22:31.59:0,32,348	1/1:22,0:22:32.98:333,33,0	0/1:21,1:22:50.55:375,0,51	1/1:19,0:19:8.19:85,8,0	1/1:8,0:8:2.90:16,3,0	0/1:15,0:12:5.88:6,0,418	0/0:20,0:20:47.15:0,47,644	0/0:23,0:22:36.12:0,36,548	0/0:21,0:21:3.62:0,4,86	0/0:12,0:12:8.59:0,9,139	0/1:23,0:23:35.64:36,0,63	1/1:29,0:29:29.42:285,29,0	0/1:26,0:26:31.56:32,0,975	0/0:15,0:15:24.86:0,25,487	0/1:22,0:22:22.92:23,0,553
chr10	44111381	.	TGCAC	T	2251.11	PASS	AB=0.978;AC=20;AF=0.357;AN=56;BaseQRankSum=6.880;DP=557;FS=2.789;HRun=0;HaplotypeScore=156.6216;InbreedingCoeff=0.7105;MQ=52.65;MQ0=8;MQRankSum=-6.614;QD=10.93;ReadPosRankSum=0.794;VQSLOD=3.3653;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:44.63:0,45,895	1/1:7,3:9:11.98:152,12,0	1/1:9,0:4:1.30:3,1,0	0/0:16,0:9:4.85:0,5,73	0/0:22,0:22:25.72:0,26,502	0/0:23,0:23:60.20:0,60,1366	0/0:15,0:15:45.15:0,45,1027	1/1:17,0:16:23.72:489,24,0	0/0:26,0:26:71.94:0,72,1599	1/1:28,0:27:59.54:562,60,0	1/1:19,0:19:19.81:164,20,0	0/0:19,0:19:26.98:0,27,360	0/0:15,0:15:1.34:0,1,379	0/0:22,0:22:39.09:0,39,554	1/1:22,0:22:32.04:269,32,0	0/1:21,0:22:36.20:282,0,36	1/1:17,2:19:20.87:242,21,0	1/1:8,0:8:2.60:10,3,0	0/0:18,0:15:38.72:0,39,750	0/0:24,0:24:49.23:0,49,958	0/0:25,0:24:36.12:0,36,814	0/0:21,0:21:36.06:0,36,308	0/0:14,0:14:15.77:0,16,256	0/0:24,0:24:15.48:0,15,209	1/1:29,0:29:27.63:221,28,0	0/0:24,0:24:12.71:0,13,1432	0/0:15,0:15:7.16:0,7,676	0/1:23,0:23:55.29:55,0,821
chr10	44111382	.	GCA	G	1517.12	PASS	AB=0.982;AC=25;AF=0.446;AN=56;BaseQRankSum=6.730;DP=557;FS=2.774;HRun=0;HaplotypeScore=145.5374;InbreedingCoeff=0.4817;MQ=52.62;MQ0=9;MQRankSum=-6.502;QD=5.13;ReadPosRankSum=0.721;VQSLOD=2.9332;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:44.68:0,45,609	1/1:3,7:9:12.02:155,12,0	1/1:8,0:4:2.44:7,2,0	0/1:17,0:9:11.58:12,0,37	0/0:22,0:22:25.79:0,26,343	0/0:23,0:23:56.88:0,57,898	0/0:15,0:15:45.14:0,45,703	1/1:17,0:16:23.50:271,24,0	0/0:26,0:26:71.54:0,72,1017	1/1:28,0:27:46.02:358,46,0	1/1:19,0:19:20.05:104,20,0	0/0:18,0:18:20.95:0,21,166	0/1:15,0:15:28.85:29,0,202	0/0:22,0:22:32.97:0,33,279	1/1:22,0:22:27.58:150,28,0	0/1:22,0:22:13.93:131,0,14	1/1:3,15:18:20.72:261,21,0	1/1:8,0:8:0.89:2,1,0	0/0:19,0:15:39.08:0,39,628	0/0:24,0:24:49.19:0,49,652	0/0:25,0:24:36.11:0,36,546	0/1:21,1:22:2.10:2,0,66	0/1:14,0:14:2.53:3,0,107	0/1:23,0:23:15.57:16,0,68	1/1:29,0:29:21.99:119,22,0	0/0:24,0:24:52.09:0,52,1107	0/0:15,0:15:8.23:0,8,463	0/1:21,2:23:92.41:92,0,546
chr10	44111383	.	CACGCGT	C	2357.85	PASS	AB=0.940;AC=18;AF=0.321;AN=56;BaseQRankSum=5.898;DP=562;FS=2.993;HRun=0;HaplotypeScore=170.5043;InbreedingCoeff=0.6411;MQ=52.47;MQ0=9;MQRankSum=-8.229;QD=12.88;ReadPosRankSum=1.178;VQSLOD=3.1408;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:44.66:0,45,1004	1/1:10,0:9:4.18:108,4,0	1/1:9,0:4:1.30:3,1,0	0/0:16,0:8:5.05:0,5,73	0/0:22,0:22:25.78:0,26,543	0/0:23,0:23:63.20:0,63,1532	0/0:15,0:15:45.15:0,45,1190	0/1:17,0:16:23.80:414,0,24	0/0:27,0:27:74.90:0,75,1846	1/1:27,1:27:0.32:548,0,0	1/1:18,1:19:21.04:260,21,0	0/0:18,0:18:27.07:0,27,508	0/0:15,0:15:22.33:0,22,568	0/0:22,0:22:39.09:0,39,793	1/1:22,0:22:33.22:418,33,0	0/1:19,2:22:36.31:402,0,36	1/1:18,0:18:2.05:20,2,0	1/1:8,0:8:2.94:18,3,0	0/0:19,0:15:42.12:0,42,929	0/0:23,0:23:49.23:0,49,1026	0/0:25,0:24:36.12:0,36,895	0/0:22,0:22:20.10:0,20,359	0/0:15,0:15:22.95:0,23,383	0/0:24,0:24:15.49:0,15,262	1/1:28,1:29:29.83:341,30,0	0/0:27,0:27:34.34:0,34,1799	0/0:15,0:15:33.56:0,34,801	0/0:23,0:23:28.59:0,29,1048
chr10	44111385	.	C	CGTGT	2296.28	PASS	AB=0.977;AC=19;AF=0.339;AN=56;BaseQRankSum=4.473;DP=577;FS=7.748;HRun=0;HaplotypeScore=166.3828;InbreedingCoeff=0.1927;MQ=52.15;MQ0=10;MQRankSum=-4.180;QD=7.92;ReadPosRankSum=-0.539;VQSLOD=1.5984;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:28:13.62:14,0,476	0/0:10,0:9:5.57:0,6,14	0/0:10,0:4:1.34:0,1,4	0/0:19,0:8:7.55:0,8,57	0/1:21,0:21:21.77:22,0,181	0/0:25,0:25:57.02:0,57,882	0/0:15,0:15:42:0,42,617	0/0:19,0:18:6.05:0,6,127	0/0:26,0:26:66.18:0,66,1161	0/0:30,0:29:23.60:0,24,340	0/0:21,0:21:18.92:0,19,181	1/1:4,12:19:6.97:325,7,0	1/1:9,3:14:28.50:441,28,0	1/1:4,17:22:21.24:569,21,0	0/0:25,0:25:31.77:0,32,300	0/0:23,0:22:31.86:0,32,299	0/1:20,0:20:30.28:30,0,37	0/0:8,0:8:0.89:0,1,2	0/1:18,0:14:34.23:34,0,351	0/1:23,0:23:34.81:35,0,445	0/0:25,0:24:11.72:0,12,403	1/1:16,5:22:16.12:252,16,0	0/1:11,2:15:19.77:149,0,20	1/1:9,12:25:9.18:166,9,0	0/0:31,0:31:22.05:0,22,236	0/1:28,0:28:99:158,0,588	0/1:15,0:15:69.98:70,0,183	0/1:20,0:20:99:210,0,247
chr10	44112676	.	TG	T	8199.84	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=12.028;DP=615;FS=0.000;HRun=7;HaplotypeScore=67.4025;InbreedingCoeff=0.9891;MQ=83.81;MQ0=0;MQRankSum=-8.413;QD=25.95;ReadPosRankSum=3.254;VQSLOD=5.4815;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,19:23:60.12:604,60,0	0/0:7,0:7:21.07:0,21,261	0/0:41,0:34:78.85:0,79,734	0/0:25,0:22:7.95:0,8,322	1/1:1,33:34:93.08:914,93,0	0/0:23,0:23:69.21:0,69,842	0/0:15,0:15:39.07:0,39,444	0/0:27,0:27:69.15:0,69,776	0/0:17,0:17:45.14:0,45,560	0/0:29,0:29:75.24:0,75,932	0/0:21,0:21:60.16:0,60,720	1/1:0,15:15:39.09:397,39,0	1/1:1,24:25:63.14:642,63,0	1/1:1,23:24:51.12:520,51,0	0/0:16,0:15:42.09:0,42,476	0/0:20,0:20:58.71:0,59,697	0/0:18,0:18:48.13:0,48,573	0/0:11,0:11:30.09:0,30,373	1/1:3,21:24:63.12:631,63,0	1/1:1,29:30:87.20:885,87,0	1/1:0,13:13:30.07:306,30,0	1/1:1,18:19:47.99:455,48,0	1/1:2,19:21:57.12:575,57,0	1/1:2,18:20:48.10:489,48,0	0/0:28,0:28:81.21:0,81,965	1/1:3,23:26:34.76:645,35,0	1/1:3,31:34:90.20:917,90,0	1/1:1,7:8:23.54:222,24,0
chr10	44116320	.	T	TCTC	9430.72	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=6.609;DP=552;FS=0.353;HRun=0;HaplotypeScore=81.5776;InbreedingCoeff=0.9611;MQ=68.11;MQ0=0;MQRankSum=-5.461;QD=55.47;ReadPosRankSum=-0.588;VQSLOD=6.6370;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:81.24:0,81,1323	1/1:0,7:7:18.06:415,18,0	0/0:7,0:7:11.67:0,12,204	0/0:4,0:6:6.01:0,6,77	0/0:27,0:27:72.25:0,72,1224	0/0:28,0:28:84.24:0,84,1320	0/0:27,0:27:78.27:0,78,1329	1/1:6,15:23:63.09:1189,63,0	0/0:14,0:14:42.14:0,42,713	1/1:4,18:24:66.14:1369,66,0	1/1:0,10:10:27.09:605,27,0	0/0:24,0:24:69.19:0,69,1099	0/0:17,0:17:51.17:0,51,869	0/0:14,0:14:42.11:0,42,632	1/1:3,13:18:39.13:871,39,0	1/1:0,22:22:60.21:1381,60,0	1/1:4,23:28:66.23:1474,66,0	1/1:1,23:24:60.21:1382,60,0	0/0:20,0:20:57.16:0,57,893	0/0:16,0:16:48.16:0,48,817	0/0:41,0:41:99:0,123,2031	0/0:22,0:22:60.13:0,60,915	0/0:17,0:17:48.16:0,48,813	0/0:19,0:19:57.20:0,57,971	1/1:3,11:14:33.11:744,33,0	0/0:25,1:26:6.05:0,6,1135	0/0:14,0:14:42.14:0,42,715	0/0:15,0:15:42.04:0,42,654
chr10	44117718	.	C	CCT	13921.84	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-1.607;DP=520;FS=0.000;HRun=0;HaplotypeScore=67.7628;InbreedingCoeff=0.9639;MQ=69.33;MQ0=10;MQRankSum=-0.861;QD=32.38;ReadPosRankSum=4.430;VQSLOD=6.9177;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,16:20:19.45:485,19,0	1/1:0,7:7:21.07:349,21,0	0/0:19,0:12:8.78:0,9,90	0/0:21,0:14:29.99:0,30,318	1/1:5,17:22:48.16:772,48,0	0/0:18,0:18:45.14:0,45,566	0/0:17,0:17:37.72:0,38,478	1/1:9,21:30:28.35:955,28,0	0/0:15,0:15:36.11:0,36,454	1/1:8,26:34:78.22:1234,78,0	1/1:2,18:20:51.09:815,51,0	1/1:0,8:9:18.06:299,18,0	1/1:3,12:15:30.10:498,30,0	1/1:2,10:13:27.09:432,27,0	1/1:2,14:15:33.11:548,33,0	1/1:2,17:17:33.11:549,33,0	1/1:3,8:11:15.05:249,15,0	1/1:1,15:16:42.14:698,42,0	1/1:2,15:16:45.15:740,45,0	1/1:9,21:31:25.40:942,25,0	1/1:2,7:9:18.06:299,18,0	1/1:2,11:13:33.11:548,33,0	1/1:7,11:18:33.11:546,33,0	1/1:7,6:12:24.08:386,24,0	1/1:5,23:28:10.29:710,10,0	1/1:3,10:12:30.10:471,30,0	1/1:5,24:30:45.15:746,45,0	1/1:10,14:24:39.13:648,39,0
chr10	44119293	.	GA	G	16423.46	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=9.325;DP=664;FS=0.000;HRun=5;HaplotypeScore=72.7411;InbreedingCoeff=0.9890;MQ=61.85;MQ0=2;MQRankSum=-0.225;QD=29.49;ReadPosRankSum=2.140;VQSLOD=5.3013;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,28:33:84.24:951,84,0	1/1:1,11:12:33.09:371,33,0	0/0:19,0:18:45.09:0,45,555	0/0:18,0:16:38.86:0,39,487	1/1:2,24:26:66.19:745,66,0	0/0:27,0:27:81.27:0,81,1108	0/0:20,0:20:57.17:0,57,751	1/1:1,23:23:66.17:737,66,0	0/0:23,0:23:63.21:0,63,857	1/1:5,29:33:87.22:973,87,0	1/1:0,29:29:72.20:815,72,0	1/1:1,16:17:42.12:476,42,0	1/1:2,21:23:57.16:647,57,0	1/1:2,27:29:78.22:884,78,0	1/1:3,22:25:66.19:748,66,0	1/1:3,18:21:10.10:503,10,0	1/1:0,28:28:78.22:885,78,0	1/1:1,17:18:54.09:595,54,0	1/1:2,19:21:57.11:631,57,0	1/1:1,27:27:60.08:650,60,0	1/1:1,30:31:87.25:987,87,0	1/1:0,27:27:75.21:850,75,0	1/1:1,21:22:54.15:611,54,0	1/1:1,23:24:66.19:746,66,0	1/1:1,20:21:51.15:578,51,0	1/1:1,28:29:84.24:951,84,0	1/1:0,25:25:66.19:748,66,0	1/1:0,10:10:30.09:340,30,0
chr10	44119547	.	A	AAC	7501.21	PASS	AB=0.802;AC=18;AF=0.321;AN=56;BaseQRankSum=14.980;DP=578;FS=4.277;HRun=0;HaplotypeScore=74.4131;InbreedingCoeff=0.8319;MQ=56.85;MQ0=13;MQRankSum=-1.147;QD=34.57;ReadPosRankSum=1.696;VQSLOD=7.2690;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:22:54.13:0,54,722	1/1:0,9:9:27.09:473,27,0	0/0:10,0:4:9.03:0,9,124	0/0:14,0:4:11.97:0,12,142	0/0:32,0:30:81.26:0,81,1128	0/0:28,0:28:81.26:0,81,1141	0/0:20,0:20:48.16:0,48,683	1/1:8,16:15:33.06:517,33,0	0/0:22,0:22:63.20:0,63,885	1/1:2,23:23:66.20:1121,66,0	1/1:0,25:25:63.21:1075,63,0	0/0:17,0:17:39.12:0,39,541	0/0:15,0:15:45.15:0,45,645	0/0:18,0:18:54.15:0,54,729	1/1:4,26:30:78.26:1289,78,0	1/1:1,23:23:54.18:946,54,0	1/1:4,23:27:12.98:852,13,0	0/1:7,7:14:18.65:428,0,19	0/0:21,0:17:48.13:0,48,667	0/0:30,0:30:81.23:0,81,1128	0/0:16,0:16:42.14:0,42,601	0/0:18,0:18:51.16:0,51,713	0/0:17,0:17:51.17:0,51,731	0/0:17,0:17:39.12:0,39,536	1/1:3,20:22:48.16:794,48,0	0/1:14,1:15:7.30:7,0,556	0/0:29,0:28:84.26:0,84,1168	0/0:13,0:13:39.13:0,39,555
chr10	44120334	.	A	AAAAC	11158.66	PASS	AB=0.629;AC=44;AF=0.786;AN=56;BaseQRankSum=-0.635;DP=435;FS=16.985;HRun=0;HaplotypeScore=97.7786;InbreedingCoeff=0.6649;MQ=51.77;MQ0=7;MQRankSum=-3.156;QD=34.98;ReadPosRankSum=-0.251;VQSLOD=3.3045;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,0:6:10.18:88,10,0	0/1:4,9:12:21.38:553,0,21	0/0:27,0:15:21.07:0,21,303	0/0:13,0:6:12.04:0,12,194	1/1:3,0:13:30.09:488,30,0	0/0:30,0:30:65.89:0,66,1013	0/0:23,0:23:43.17:0,43,716	1/1:13,4:17:21.07:388,21,0	0/0:23,0:23:54.18:0,54,852	1/1:12,18:29:8.72:1193,9,0	1/1:11,18:29:54.18:1224,54,0	1/1:4,0:8:15.05:261,15,0	1/1:1,0:2:3.01:52,3,0	1/1:3,0:5:12.04:191,12,0	1/1:11,17:28:48.16:1160,48,0	1/1:8,13:22:33.11:780,33,0	1/1:6,10:16:24.08:580,24,0	0/1:10,10:19:24.35:483,0,24	1/1:8,0:8:6.02:105,6,0	1/1:5,0:12:27.09:452,27,0	1/1:5,0:6:9.03:153,9,0	1/1:2,0:6:12.04:198,12,0	1/1:6,0:12:30.10:492,30,0	1/1:4,1:6:9.50:148,10,0	1/1:8,17:26:36.12:870,36,0	1/1:4,1:10:27.09:491,27,0	1/1:8,0:16:42.13:704,42,0	1/1:3,0:3:5.57:103,6,0
chr10	44121283	.	AG	A	7695.44	PASS	AB=0.525;AC=15;AF=0.268;AN=56;BaseQRankSum=17.118;DP=682;FS=5.810;HRun=2;HaplotypeScore=78.6796;InbreedingCoeff=0.9088;MQ=57.41;MQ0=5;MQRankSum=4.413;QD=34.82;ReadPosRankSum=1.146;VQSLOD=5.1843;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:51.14:0,51,706	1/1:0,13:13:39.13:506,39,0	0/0:29,0:11:29.95:0,30,385	0/0:28,0:12:30.10:0,30,448	0/0:25,0:25:75.19:0,75,1058	0/0:25,0:25:69.21:0,69,992	0/0:22,0:21:60.19:0,60,871	0/0:38,0:38:99:0,114,1648	0/0:16,0:16:48.15:0,48,698	1/1:1,40:40:99:1557,120,0	1/1:0,30:30:84.09:1024,84,0	0/0:16,0:16:45.14:0,45,650	0/0:17,0:17:51.17:0,51,759	0/0:19,0:19:57.16:0,57,812	1/1:0,28:28:72.23:934,72,0	1/1:0,32:32:93.30:1207,93,0	1/1:1,31:32:62.24:1008,62,0	0/1:2,19:21:31.13:604,0,31	0/0:20,0:15:42.10:0,42,586	0/0:37,0:37:99:0,111,1617	0/0:16,0:16:45.13:0,45,650	0/0:20,0:20:57.18:0,57,832	0/0:21,0:21:63.21:0,63,940	0/0:20,0:20:57.19:0,57,850	1/1:0,24:24:66.21:856,66,0	0/0:32,0:32:93.32:0,93,1393	0/0:25,0:25:69.23:0,69,1033	0/0:16,0:16:48.16:0,48,719
chr10	44121480	.	GA	G	6722.82	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=14.675;DP=623;FS=1.457;HRun=3;HaplotypeScore=63.1569;InbreedingCoeff=0.9981;MQ=59.90;MQ0=7;MQRankSum=-0.921;QD=31.86;ReadPosRankSum=0.245;VQSLOD=4.7733;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:81.06:0,81,1113	1/1:0,8:8:24.08:298,24,0	0/0:31,0:17:39.02:0,39,515	0/0:35,0:16:48:0,48,640	0/0:28,0:28:84.28:0,84,1207	0/0:25,0:25:72.23:0,72,1018	0/0:7,0:7:18.06:0,18,259	1/1:3,33:34:93.22:1087,93,0	0/0:18,0:18:54.18:0,54,778	1/1:0,34:34:99:1263,102,0	1/1:1,23:24:63.11:760,63,0	0/0:18,0:18:45.12:0,45,626	0/0:20,0:20:60.19:0,60,844	0/0:12,0:12:36.12:0,36,518	1/1:1,15:16:45.11:541,45,0	1/1:0,20:20:51.16:632,51,0	1/1:3,28:31:54.95:855,55,0	1/1:3,14:16:26.49:468,26,0	0/0:20,0:16:48.16:0,48,691	0/0:26,0:26:78.26:0,78,1123	0/0:17,0:17:51.16:0,51,717	0/0:27,0:27:81.27:0,81,1166	0/0:25,0:25:72.21:0,72,1000	0/0:13,0:13:39.12:0,39,542	1/1:1,24:25:66.21:818,66,0	0/0:24,0:24:69.21:0,69,957	0/0:21,0:21:57.17:0,57,785	0/0:10,0:10:30.10:0,30,430
chr10	44122852	.	A	AC	5822.48	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=4.933;DP=624;FS=0.366;HRun=0;HaplotypeScore=99.3699;InbreedingCoeff=0.9978;MQ=52.68;MQ0=14;MQRankSum=-13.525;QD=37.56;ReadPosRankSum=-1.543;VQSLOD=4.1689;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,1:44:81.51:0,82,1711	1/1:3,7:10:21.03:304,21,0	0/0:25,0:9:27.09:0,27,378	0/0:20,0:10:30.09:0,30,403	0/0:31,0:30:90.27:0,90,1225	0/0:22,0:22:66.22:0,66,923	0/0:18,0:18:51.13:0,51,662	1/1:1,26:27:75.22:1163,75,0	0/0:30,0:30:90.29:0,90,1240	1/1:1,26:24:69.23:1086,69,0	1/1:1,16:17:33.50:495,33,0	0/0:21,0:21:63.21:0,63,881	0/0:18,0:18:51.15:0,51,679	0/0:18,0:18:54.18:0,54,754	1/1:1,15:16:39.11:595,39,0	1/1:1,16:18:42.14:651,42,0	1/1:0,16:14:36.12:573,36,0	1/1:0,8:7:18.06:287,18,0	0/0:27,0:25:72.24:0,72,1006	0/0:36,0:36:99:0,105,1438	0/0:37,0:37:99:0,111,1535	0/0:26,0:26:75.25:0,75,1049	0/0:23,0:23:69.19:0,69,928	0/0:23,0:23:66.21:0,66,906	1/1:1,15:16:42.14:668,42,0	0/0:23,0:23:63.21:0,63,881	0/0:13,0:13:39.12:0,39,530	0/0:14,0:14:42.14:0,42,587
chr10	44122875	.	ATGGCAGTTTCTCAGAAAAT	A	10272.64	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=13.372;DP=607;FS=3.621;HRun=0;HaplotypeScore=313.1792;InbreedingCoeff=0.9689;MQ=58.05;MQ0=1;MQRankSum=-12.031;QD=98.78;ReadPosRankSum=2.631;VQSLOD=4.2431;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,123,10399	1/1:1,8:9:27.09:1338,27,0	0/0:22,0:21:63.17:0,63,4071	0/0:24,0:22:57.20:0,57,4033	0/0:27,0:27:75.24:0,75,6138	0/0:20,0:20:57.20:0,57,4835	0/0:22,0:22:66.20:0,66,5178	0/0:27,0:27:72.25:0,72,6012	0/0:26,0:26:75.26:0,75,6131	1/1:8,14:20:42.10:2123,42,0	1/1:2,10:12:30.10:1267,30,0	0/0:26,0:26:78.27:0,78,6152	0/0:20,0:20:57.20:0,57,4884	0/0:17,0:17:48.15:0,48,3273	1/1:2,9:11:27.09:1456,27,0	1/1:5,10:15:33.11:1708,33,0	1/1:6,6:12:21.07:1062,21,0	1/1:7,1:7:3.01:162,3,0	0/0:23,0:23:63.21:0,63,3441	0/0:36,0:36:96.32:0,96,7966	0/0:32,0:32:87.30:0,87,7270	0/0:29,0:29:81.28:0,81,6605	0/0:25,0:25:66.23:0,66,5480	0/0:21,0:21:60.21:0,60,5450	1/1:8,7:15:24.07:1158,24,0	0/0:23,0:23:69.24:0,69,6059	0/0:23,0:23:69.24:0,69,5877	0/0:16,0:16:42.14:0,42,3570
chr10	44122878	.	G	GA	120.24	PASS	AB=0.947;AC=7;AF=0.125;AN=56;BaseQRankSum=5.235;DP=565;FS=1.053;HRun=0;HaplotypeScore=109.6740;InbreedingCoeff=0.1831;MQ=59.13;MQ0=2;MQRankSum=-3.676;QD=1.94;ReadPosRankSum=-3.219;VQSLOD=1.7938;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,123,1701	0/1:9,0:9:17.29:18,0,17	0/0:25,0:23:69.15:0,69,907	0/0:22,0:20:57.19:0,57,784	0/0:27,0:27:81.23:0,81,1080	0/0:21,0:21:60.18:0,60,821	0/0:23,0:23:69.19:0,69,914	0/0:26,0:26:75.24:0,75,1034	0/0:27,0:27:78.25:0,78,1074	0/1:15,1:14:1.44:1,0,26	1/1:10,1:11:3.53:139,4,0	0/0:26,0:26:78.26:0,78,1089	0/0:19,0:19:57.19:0,57,797	0/0:17,0:17:48.15:0,48,654	0/0:9,0:9:16.35:0,16,41	0/1:10,1:11:17.17:33,0,17	0/1:6,1:7:13.59:31,0,14	0/0:2,0:1:1.82:0,2,5	0/0:21,0:21:63.19:0,63,849	0/0:33,0:33:99:0,99,1349	0/0:30,0:30:90.28:0,90,1240	0/0:27,0:27:81.27:0,81,1131	0/0:23,0:23:69.22:0,69,949	0/0:20,0:20:60.20:0,60,839	0/1:8,0:8:11.24:17,0,11	0/0:25,0:25:75.23:0,75,1017	0/0:23,0:23:69.23:0,69,965	0/0:16,0:16:42.14:0,42,584
chr10	44124038	.	A	AGAT	3087.95	PASS	AB=0.765;AC=9;AF=0.161;AN=56;BaseQRankSum=10.782;DP=817;FS=8.171;HRun=0;HaplotypeScore=202.7409;InbreedingCoeff=-0.1356;MQ=55.43;MQ0=20;MQRankSum=-9.933;QD=21.30;ReadPosRankSum=-0.660;VQSLOD=2.5535;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:63,0:60:99:0,121,2762	0/1:6,1:4:46.78:138,0,47	0/0:29,0:13:38.39:0,38,626	0/0:39,0:29:60.15:0,60,1102	0/0:38,0:35:63.19:0,63,1134	0/0:44,0:39:85.36:0,85,1542	0/0:31,0:30:77.45:0,77,1419	0/1:25,0:18:99:187,0,588	0/0:37,0:33:71.14:0,71,1262	0/1:11,5:13:84.54:442,0,85	0/1:4,7:10:93.59:276,0,94	0/0:21,0:20:46:0,46,776	0/0:34,0:29:68.26:0,68,1236	0/0:36,0:33:83.36:0,83,1457	0/1:17,5:19:99:456,0,206	0/1:15,10:23:99:754,0,167	0/1:9,5:13:5.02:419,0,5	0/1:7,4:10:37.52:280,0,38	0/0:45,0:38:99:0,114,2028	0/0:40,0:34:99:0,99,1782	0/0:34,0:34:93.26:0,93,1697	0/0:24,0:23:48.16:0,48,894	0/0:17,0:14:36.11:0,36,640	0/0:46,0:45:99:0,105,2020	0/1:6,4:9:93.57:277,0,94	0/0:39,0:34:99:0,102,1716	0/0:43,0:38:97.57:0,98,1758	0/0:8,0:8:24.08:0,24,442
chr10	44125281	.	CAT	C	6213.39	PASS	AB=0.909;AC=19;AF=0.339;AN=56;BaseQRankSum=13.270;DP=597;FS=0.346;HRun=0;HaplotypeScore=75.2235;InbreedingCoeff=0.8642;MQ=61.90;MQ0=7;MQRankSum=-0.400;QD=26.22;ReadPosRankSum=1.220;VQSLOD=5.6318;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,1:37:55.10:0,55,1431	1/1:0,14:14:42.13:535,42,0	0/0:7,0:3:5.98:0,6,100	0/0:22,0:19:26.92:0,27,336	0/0:23,0:23:57.19:0,57,930	0/0:22,0:22:57.15:0,57,896	0/0:25,0:25:66.23:0,66,1105	1/1:8,27:34:72.16:852,72,0	0/0:17,1:18:15.98:0,16,811	1/1:4,20:24:60.15:734,60,0	1/1:2,15:17:36.12:458,36,0	0/0:19,1:20:12.96:0,13,740	0/0:13,0:13:36.12:0,36,599	0/0:17,1:18:6.97:0,7,661	1/1:9,25:34:66.21:840,66,0	1/1:2,20:21:48.15:611,48,0	1/1:4,22:26:63.20:799,63,0	1/1:3,15:18:42.11:518,42,0	0/0:16,0:13:27.09:0,27,452	0/0:28,0:28:66.64:0,67,1047	0/0:29,0:29:81.24:0,81,1303	0/0:14,0:14:36.11:0,36,577	0/0:11,0:11:27.09:0,27,452	0/1:18,2:20:25.23:25,0,702	1/1:2,25:26:66.21:840,66,0	0/0:15,1:16:3.93:0,4,590	0/0:25,0:25:57.19:0,57,943	0/0:15,0:15:27.09:0,27,451
chr10	44127087	.	TAA	T	2635.01	PASS	AB=0.842;AC=19;AF=0.339;AN=56;BaseQRankSum=3.633;DP=405;FS=2.217;HRun=11;HaplotypeScore=78.7778;InbreedingCoeff=0.8293;MQ=45.20;MQ0=26;MQRankSum=0.815;QD=18.56;ReadPosRankSum=1.546;VQSLOD=2.9993;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:18:36.65:0,37,391	1/1:0,3:3:9.02:92,9,0	0/0:11,0:3:5.87:0,6,74	0/0:17,0:4:6.34:0,6,64	0/0:23,0:24:30.55:0,31,483	0/0:12,0:11:30.10:0,30,460	0/0:9,0:8:24.04:0,24,343	1/1:11,7:16:14.94:150,15,0	0/0:13,0:14:30.10:0,30,444	1/1:1,14:15:42.09:431,42,0	1/1:4,24:27:66.08:652,66,0	0/0:8,0:8:11.07:0,11,122	0/0:8,0:8:17.89:0,18,206	0/0:11,0:11:30.08:0,30,364	1/1:4,10:14:30.04:303,30,0	1/1:1,14:15:38.80:393,39,0	1/1:4,11:13:36.08:379,36,0	1/1:0,9:9:23.95:232,24,0	0/0:15,0:11:27.06:0,27,320	0/0:28,0:28:56.22:0,56,868	0/0:8,0:3:6.02:0,6,74	0/0:14,0:14:30.04:0,30,354	0/0:19,0:20:39.63:0,40,431	0/0:3,0:4:3.01:0,3,32	1/1:2,7:8:18.02:185,18,0	0/1:13,2:14:25.43:25,0,308	0/0:19,0:16:42:0,42,517	0/0:14,0:13:36.10:0,36,438
chr10	44127098	.	AC	A	2979.36	PASS	AB=0.983;AC=46;AF=0.821;AN=56;BaseQRankSum=8.061;DP=431;FS=18.927;HRun=1;HaplotypeScore=81.4223;InbreedingCoeff=0.6883;MQ=50.88;MQ0=16;MQRankSum=-0.581;QD=7.94;ReadPosRankSum=3.713;VQSLOD=-0.4729;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:23,2:21:11.87:137,12,0	1/1:5,0:5:11.48:63,11,0	0/0:19,1:4:10.70:0,11,75	0/1:27,1:9:23.87:24,0,36	1/1:23,0:23:26.33:146,26,0	0/0:11,0:11:33.01:0,33,320	0/0:10,0:10:30.03:0,30,299	1/1:12,0:11:20.61:111,21,0	0/0:15,0:14:38.72:0,39,358	1/1:17,0:17:46.88:242,47,0	1/1:28,0:27:67.98:386,68,0	1/1:7,1:8:12.28:63,12,0	0/1:8,0:7:2.53:33,0,3	1/1:14,0:14:27.39:97,27,0	1/1:16,0:16:31.36:169,31,0	1/1:17,0:17:45.80:260,46,0	1/1:14,0:12:35.09:218,35,0	1/1:9,0:9:23.11:131,23,0	1/1:13,1:13:9.33:102,9,0	1/1:34,0:33:14.13:153,14,0	1/1:6,0:3:7.09:26,7,0	1/1:16,0:16:31.20:144,31,0	1/1:17,1:18:21.86:159,22,0	1/1:3,0:3:2.74:12,3,0	1/1:11,0:11:24.82:127,25,0	1/1:15,0:13:9.81:92,10,0	1/1:19,1:18:17.33:112,17,0	1/1:13,1:13:28.77:138,29,0
chr10	44127099	.	CA	C	7517.58	PASS	AB=1.000;AC=47;AF=0.839;AN=56;BaseQRankSum=5.144;DP=437;FS=40.336;HRun=11;HaplotypeScore=67.9834;InbreedingCoeff=0.8026;MQ=52.33;MQ0=15;MQRankSum=-1.507;QD=19.84;ReadPosRankSum=2.386;VQSLOD=3.2760;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:16,7:20:21.95:329,22,0	1/1:0,5:5:12.01:111,12,0	0/0:21,0:5:6.50:0,7,74	0/1:29,0:9:10.34:10,0,106	1/1:5,18:23:48.02:446,48,0	0/0:12,0:12:27.08:0,27,326	0/0:10,0:10:30.09:0,30,362	1/1:6,7:12:27.02:251,27,0	0/0:15,0:14:39.10:0,39,453	1/1:0,17:17:51.05:476,51,0	1/1:6,23:28:72.86:645,73,0	1/1:5,4:9:18:161,18,0	1/1:2,6:7:15.02:145,15,0	1/1:4,10:14:36.04:339,36,0	1/1:0,16:16:33.01:309,33,0	1/1:1,16:17:45.02:411,45,0	1/1:3,11:12:36.04:338,36,0	1/1:0,9:9:24.03:223,24,0	1/1:8,6:13:35.98:334,36,0	1/1:6,29:34:81.07:764,81,0	1/1:4,2:3:9.01:86,9,0	1/1:1,15:16:39.06:373,39,0	1/1:5,12:18:44.03:394,44,0	1/1:2,2:4:6:52,6,0	1/1:0,11:11:27.02:252,27,0	1/1:3,12:13:36.05:344,36,0	1/1:8,12:18:42.06:399,42,0	1/1:4,10:13:35.90:326,36,0
chr10	44127146	.	T	TA	3617.48	PASS	AB=0.758;AC=27;AF=0.482;AN=56;BaseQRankSum=-3.621;DP=503;FS=1.055;HRun=12;HaplotypeScore=88.4874;InbreedingCoeff=0.2481;MQ=71.87;MQ0=2;MQRankSum=1.694;QD=10.25;ReadPosRankSum=-0.332;VQSLOD=3.1327;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,19:29:21.92:502,22,0	0/0:5,0:6:11.82:0,12,81	0/1:29,1:16:22.26:22,0,51	0/1:21,0:13:16.22:16,0,32	0/1:8,8:16:22.33:194,0,22	0/0:11,0:12:19.88:0,20,137	0/0:11,0:11:26.83:0,27,197	0/1:9,18:27:20.73:279,0,21	0/0:23,0:23:47.67:0,48,350	0/0:19,0:19:32.71:0,33,237	0/0:24,0:26:51.71:0,52,360	1/1:3,8:11:20.98:187,21,0	1/1:4,7:11:17.95:159,18,0	1/1:5,12:16:36.03:338,36,0	0/0:21,0:22:31.79:0,32,225	0/0:16,0:18:45.81:0,46,316	0/0:12,0:12:22.84:0,23,154	0/1:11,1:12:5.31:5,0,129	1/1:8,12:20:1.28:309,1,0	0/1:17,11:29:22.93:298,0,23	0/1:2,5:7:3.88:128,0,4	1/1:10,4:14:14.96:134,15,0	1/1:9,11:20:14.48:208,14,0	1/1:2,3:5:9.01:88,9,0	0/1:13,1:15:3.33:3,0,131	0/1:9,9:18:10.55:220,0,11	0/1:12,17:28:4.76:278,0,5	0/1:9,10:19:26.68:249,0,27
chr10	44129988	.	GA	G	500.97	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.287;DP=555;FS=12.063;HRun=8;HaplotypeScore=54.0067;InbreedingCoeff=0.9305;MQ=79.19;MQ0=0;MQRankSum=-1.177;QD=19.27;ReadPosRankSum=-3.203;VQSLOD=1.6009;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,1:22:31.18:0,31,635	0/0:9,0:9:26.95:0,27,305	0/0:21,0:17:31.28:0,31,351	0/0:12,0:13:8.22:0,8,120	0/0:23,0:23:66.14:0,66,770	0/0:29,0:29:75.22:0,75,894	0/0:23,0:23:69.18:0,69,807	1/1:3,23:26:63.05:596,63,0	0/0:14,0:14:36.10:0,36,423	0/0:22,0:22:63.19:0,63,753	0/0:22,0:22:51.16:0,51,616	0/0:9,0:10:26.95:0,27,304	0/0:16,0:16:42.12:0,42,496	0/0:18,0:18:45.14:0,45,544	0/0:17,0:17:51.16:0,51,616	0/0:24,0:24:63.19:0,63,761	0/0:21,0:21:57.16:0,57,675	0/0:15,0:15:42.09:0,42,491	0/0:26,0:26:72.18:0,72,825	0/0:21,0:21:60.17:0,60,704	0/0:9,0:9:27.08:0,27,326	0/0:24,0:24:66.20:0,66,797	0/0:26,0:26:69.16:0,69,816	0/0:8,0:8:24.03:0,24,274	0/0:25,0:25:69.21:0,69,833	0/0:24,0:24:66.15:0,66,780	0/0:35,0:35:99:0,102,1213	0/0:12,0:12:33.10:0,33,398
chr10	44132560	.	C	CA	9575.89	PASS	AB=1.000;AC=33;AF=0.589;AN=56;BaseQRankSum=-10.948;DP=522;FS=5.449;HRun=4;HaplotypeScore=67.8219;InbreedingCoeff=0.8960;MQ=72.48;MQ0=0;MQRankSum=-3.149;QD=29.11;ReadPosRankSum=-0.471;VQSLOD=4.4020;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,26:27:69.23:941,69,0	1/1:9,0:9:1.89:83,2,0	0/0:12,0:11:23.12:0,23,264	0/0:13,0:13:29.97:0,30,306	1/1:3,33:36:90.05:1126,90,0	0/0:23,0:23:66.12:0,66,702	0/0:18,0:18:48.11:0,48,523	1/1:3,23:26:68.43:845,68,0	0/0:11,0:11:33.08:0,33,363	0/0:24,0:23:68.27:0,68,479	0/0:13,0:13:38.54:0,39,257	1/1:1,14:15:36.12:472,36,0	1/1:0,14:14:33.11:432,33,0	1/1:0,11:11:27.09:355,27,0	0/0:19,0:19:50.49:0,50,350	0/0:19,0:19:53.34:0,53,378	0/1:32,0:31:23.06:65,0,23	0/0:26,0:26:65.30:0,65,447	1/1:1,17:18:51:636,51,0	1/1:0,14:14:36.06:462,36,0	1/1:0,10:10:24.08:328,24,0	1/1:2,21:23:58.07:749,58,0	1/1:1,21:22:66.21:857,66,0	1/1:1,7:8:18.06:235,18,0	0/0:15,0:15:44.37:0,44,305	1/1:4,17:21:33.98:644,34,0	1/1:3,18:22:39.12:531,39,0	1/1:0,21:21:60.20:815,60,0
chr10	44132564	.	AT	A	3115.66	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=1.278;DP=516;FS=11.992;HRun=9;HaplotypeScore=90.5381;InbreedingCoeff=0.9948;MQ=71.93;MQ0=0;MQRankSum=-2.899;QD=15.20;ReadPosRankSum=3.460;VQSLOD=2.7105;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:70.85:0,71,464	0/0:9,0:9:17.37:0,17,97	0/0:10,0:10:24.07:0,24,270	0/0:14,0:14:24.78:0,25,335	0/0:35,0:35:99:0,101,721	0/0:23,0:23:60.14:0,60,663	0/0:18,0:18:48.11:0,48,533	0/0:28,0:28:74.45:0,74,564	0/0:11,0:11:30.09:0,30,345	1/1:3,22:25:65.96:591,66,0	1/1:0,13:13:39.02:357,39,0	1/1:14,0:14:30.70:124,31,0	1/1:14,0:14:29.32:120,29,0	1/1:11,0:11:21.31:91,21,0	1/1:2,16:18:45.02:412,45,0	1/1:4,15:19:41.92:384,42,0	0/0:33,0:32:62.07:0,62,417	1/1:3,22:25:57.03:521,57,0	0/0:18,0:18:47.56:0,48,338	0/0:14,0:14:33.48:0,33,218	0/0:10,0:10:23.45:0,23,149	1/1:22,0:22:42.60:170,43,0	1/1:22,0:22:44.85:181,45,0	1/1:6,0:6:16.02:65,16,0	1/1:3,13:16:36.01:329,36,0	0/0:17,1:18:22.54:0,23,273	0/0:21,0:21:44.43:0,44,325	0/0:21,0:21:55.62:0,56,367
chr10	44133634	.	GC	G	10737.85	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=9.472;DP=692;FS=9.195;HRun=6;HaplotypeScore=72.2162;InbreedingCoeff=0.9989;MQ=72.77;MQ0=0;MQRankSum=-1.159;QD=27.67;ReadPosRankSum=2.758;VQSLOD=5.3157;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,34:36:96.24:1032,96,0	0/0:8,0:8:21.07:0,21,276	0/0:22,0:21:53.33:0,53,653	0/0:22,0:22:29.68:0,30,578	1/1:5,29:34:78.19:836,78,0	0/0:27,0:27:75.24:0,75,986	0/0:25,0:25:60.18:0,60,771	1/1:4,26:30:78.17:822,78,0	0/0:27,0:27:72.23:0,72,947	0/0:20,0:20:60.18:0,60,773	0/0:26,0:26:72.22:0,72,930	1/1:0,19:19:45.11:484,45,0	1/1:1,9:10:27.07:290,27,0	1/1:0,18:18:42.11:451,42,0	0/0:22,0:22:66.20:0,66,853	0/0:22,0:22:66.21:0,66,867	0/0:37,0:37:99:0,102,1320	0/0:18,0:17:51.17:0,51,669	1/1:3,19:22:54.13:580,54,0	1/1:0,28:28:78.19:837,78,0	1/1:2,45:47:99:1322,123,0	1/1:1,22:23:57.14:613,57,0	1/1:0,31:31:87.22:935,87,0	1/1:0,26:26:66.17:709,66,0	0/0:28,0:28:81.26:0,81,1064	1/1:2,21:23:60.12:634,60,0	1/1:2,31:33:87.22:935,87,0	1/1:0,8:8:24.06:258,24,0
chr10	44137564	.	TGTGTGTGTGTGTGTGTGTGTGTGC	T	1903.99	PASS	AB=0.794;AC=12;AF=0.222;AN=54;BaseQRankSum=3.669;DP=405;FS=21.526;HRun=0;HaplotypeScore=215.1394;InbreedingCoeff=0.6243;MQ=49.18;MQ0=15;MQRankSum=1.676;QD=16.56;ReadPosRankSum=-1.082;VQSLOD=1.0175;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:20:30.73:348,31,0	0/0:3,0:3:3.01:0,3,260	0/0:11,0:1:3.01:0,3,57	0/0:14,0:6:5.98:0,6,245	1/1:4,0:4:9:122,9,0	0/0:9,0:9:15.05:0,15,1142	0/0:21,0:21:48.15:0,48,2962	0/0:14,0:12:9.40:0,9,170	0/0:21,0:20:40.36:0,40,2760	0/0:12,0:11:33.05:0,33,2446	0/0:7,0:7:10.59:0,11,940	0/0:21,0:21:14.98:0,15,592	0/0:12,0:12:6.47:0,6,55	0/0:12,0:12:8.99:0,9,75	0/0:19,0:18:23.67:0,24,838	0/0:12,0:12:30.08:0,30,2568	0/0:25,0:25:45.83:0,46,3087	0/0:11,0:10:15.05:0,15,1095	1/1:7,8:14:4.26:170,4,0	0/1:4,6:9:0:0,0,0	0/1:25,1:23:23.02:114,0,23	0/0:13,0:12:3.01:0,3,48	0/0:15,0:15:24.06:0,24,570	0/0:27,0:26:17.48:0,17,833	0/0:11,0:11:19.60:0,20,1577	1/1:3,20:23:47.90:734,48,0	1/1:4,13:17:5.42:573,5,0	./.
chr10	44137574	.	TGTGTGTGTGTGTGC	T	2910.56	PASS	AB=1.000;AC=23;AF=0.442;AN=52;BaseQRankSum=1.933;DP=411;FS=14.897;HRun=0;HaplotypeScore=150.3898;InbreedingCoeff=0.5893;MQ=47.46;MQ0=15;MQRankSum=0.909;QD=13.41;ReadPosRankSum=-4.065;VQSLOD=0.0415;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:27:5.06:174,5,0	0/0:3,0:3:2.83:0,3,128	0/0:14,0:2:0.58:0,1,16	0/0:12,0:6:3.86:0,4,52	1/1:10,0:10:17.98:150,18,0	0/0:10,0:9:23.74:0,24,558	0/0:24,0:24:52.16:0,52,1583	0/1:16,0:15:20.98:123,0,21	0/0:19,0:17:36.71:0,37,1373	0/0:12,0:11:25.44:0,25,1332	0/0:6,0:6:12.89:0,13,576	1/1:20,2:22:32.95:462,33,0	1/1:1,10:11:5.77:243,6,0	1/1:2,9:11:3.01:122,3,0	0/0:19,0:18:20.79:0,21,387	0/0:11,0:11:27.09:0,27,1385	0/0:23,0:23:42.33:0,42,1688	0/0:10,0:9:17.65:0,18,507	0/1:9,0:8:15.61:93,0,16	./.	0/1:33,0:30:6.62:90,0,7	./.	1/1:12,2:14:12.88:252,13,0	1/1:24,3:26:45.10:589,45,0	0/0:12,0:12:18.82:0,19,929	1/1:20,0:20:38.93:470,39,0	1/1:16,0:16:8.73:306,9,0	1/1:1,0:1:2.98:22,3,0
chr10	44137928	.	T	TACACACACACAC	2397.53	PASS	AB=1.000;AC=25;AF=0.694;AN=36;BaseQRankSum=-0.491;DP=141;FS=3.851;HRun=0;HaplotypeScore=55.4028;InbreedingCoeff=0.4138;MQ=30.38;MQ0=14;MQRankSum=-0.736;QD=24.72;ReadPosRankSum=1.554;VQSLOD=1.6662;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:9:4.53:73,5,0	./.	./.	./.	0/0:4,0:3:0:0,0,0	./.	0/0:3,0:3:6.49:0,6,207	1/1:17,0:15:21.54:714,22,0	0/0:2,0:2:3:0,3,25	1/1:10,0:11:20.43:535,20,0	1/1:2,0:2:3:25,3,0	0/0:3,0:3:0:0,0,0	./.	1/1:4,0:3:1.30:60,1,0	./.	./.	1/1:11,0:8:10.53:182,11,0	1/1:3,2:4:6.02:248,6,0	1/1:10,0:8:10.82:132,11,0	0/0:2,0:2:0:0,0,0	./.	./.	./.	0/1:2,0:2:0:0,0,0	1/1:10,0:5:6.02:90,6,0	1/1:3,0:2:6.02:143,6,0	1/1:4,0:4:6.02:269,6,0	1/1:4,0:3:3:25,3,0
chr10	44142599	.	CT	C	970.66	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.935;DP=722;FS=9.502;HRun=1;HaplotypeScore=67.5338;InbreedingCoeff=0.9843;MQ=83.58;MQ0=0;MQRankSum=0.750;QD=34.67;ReadPosRankSum=-3.509;VQSLOD=1.6218;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,105,1650	0/0:6,0:6:18.06:0,18,288	0/0:27,0:27:72.25:0,72,1149	0/0:30,0:30:71.21:0,71,1117	0/0:24,0:24:72.25:0,72,1147	0/0:30,0:30:90.31:0,90,1434	0/0:18,0:18:54.16:0,54,836	1/1:0,28:28:81.10:1066,81,0	0/0:29,0:29:87.25:0,87,1354	0/0:32,0:32:93.30:0,93,1444	0/0:32,0:32:96.33:0,96,1534	0/0:25,0:25:75.24:0,75,1174	0/0:19,0:19:57.19:0,57,911	0/0:22,0:22:66.21:0,66,1033	0/0:24,0:24:72.25:0,72,1149	0/0:20,0:20:60.20:0,60,957	0/0:37,0:37:99:0,111,1768	0/0:16,0:16:48.16:0,48,767	0/0:21,0:21:60.19:0,60,916	0/0:32,0:32:96.30:0,96,1488	0/0:40,0:40:99:0,120,1890	0/0:29,0:29:87.28:0,87,1367	0/0:26,0:26:75.26:0,75,1199	0/0:36,0:36:99:0,108,1649	0/0:20,0:20:60.18:0,60,914	0/0:30,0:30:90.31:0,90,1437	0/0:27,0:27:81.26:0,81,1268	0/0:6,0:6:18.06:0,18,288
chr10	44144130	.	GATAT	G	1445.48	PASS	AB=0.712;AC=15;AF=0.326;AN=46;BaseQRankSum=-3.442;DP=265;FS=1.577;HRun=0;HaplotypeScore=64.9251;InbreedingCoeff=0.4955;MQ=86.37;MQ0=1;MQRankSum=-0.099;QD=10.32;ReadPosRankSum=1.323;VQSLOD=2.6287;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	0/0:3,0:8:16.77:0,17,87	1/1:26,0:12:2.43:16,2,0	0/1:36,0:23:1.49:1,0,11	0/0:7,0:7:9.01:0,9,99	0/0:10,0:18:42.14:0,42,868	0/0:1,0:3:3.01:0,3,53	0/0:16,0:31:63.02:0,63,705	0/0:5,0:6:6.01:0,6,78	1/1:4,12:17:32.33:612,32,0	1/1:4,13:17:12.04:201,12,0	./.	0/0:0,0:1:3.01:0,3,52	./.	1/1:1,5:6:9.03:150,9,0	1/1:5,5:10:12.04:201,12,0	0/1:3,1:11:32.42:32,0,54	1/1:1,6:7:12.04:201,12,0	./.	0/0:5,0:6:5.95:0,6,71	0/0:5,0:5:2.99:0,3,24	0/0:0,0:1:3.01:0,3,52	./.	0/0:1,0:2:3.01:0,3,53	0/1:2,8:10:6.91:186,0,7	0/0:3,0:7:15.05:0,15,250	0/0:2,0:13:23.11:0,23,375	0/0:2,0:6:12.04:0,12,214
chr10	44144561	.	A	AT	3827.06	PASS	AB=0.919;AC=13;AF=0.232;AN=56;BaseQRankSum=-12.764;DP=556;FS=0.000;HRun=8;HaplotypeScore=52.2236;InbreedingCoeff=0.8606;MQ=79.40;MQ0=0;MQRankSum=-3.204;QD=22.78;ReadPosRankSum=0.014;VQSLOD=3.8215;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:41.96:0,42,375	0/0:7,0:7:20.99:0,21,184	0/0:17,0:17:41.75:0,42,363	0/0:15,0:14:1.22:0,1,203	0/0:31,0:31:83.98:0,84,749	0/0:26,0:27:68.05:0,68,605	0/0:13,0:13:39.02:0,39,357	0/0:27,0:27:60:0,60,539	0/0:17,0:17:42.02:0,42,384	1/1:2,14:16:42.12:485,42,0	1/1:2,35:37:93.19:1044,93,0	0/0:10,0:10:24.01:0,24,220	0/0:18,0:18:51.02:0,51,467	0/0:17,0:17:51.03:0,51,467	1/1:0,21:21:60.18:692,60,0	1/1:2,14:16:39.12:450,39,0	0/0:16,0:16:42:0,42,379	1/1:3,18:21:54.16:623,54,0	0/0:17,0:17:48.02:0,48,439	0/0:29,0:29:75.02:0,75,686	0/0:18,0:18:48.02:0,48,439	0/0:33,0:32:81:0,81,729	0/0:19,0:19:48:0,48,439	0/0:9,0:9:24.01:0,24,220	1/1:3,20:23:44.97:519,45,0	0/1:31,3:34:13.81:14,0,651	0/0:24,0:24:60.03:0,60,549	0/0:8,0:8:18.01:0,18,165
chr10	44146167	.	T	TG	137.14	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=0.406;DP=284;FS=1.546;HRun=5;HaplotypeScore=60.6369;InbreedingCoeff=0.5626;MQ=72.04;MQ0=5;MQRankSum=1.843;QD=10.55;ReadPosRankSum=-1.189;VQSLOD=0.6234;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:26.78:0,27,290	0/0:4,0:4:9.02:0,9,97	0/0:30,0:15:30.07:0,30,318	0/0:22,0:14:17.47:0,17,178	0/0:9,0:9:15.04:0,15,161	0/0:6,0:6:15.02:0,15,152	0/0:5,0:5:15.04:0,15,161	1/1:9,4:12:18.05:227,18,0	0/0:6,0:6:15.04:0,15,161	0/0:12,0:12:24.06:0,24,258	0/0:4,0:4:9.02:0,9,97	0/0:10,0:10:27.07:0,27,289	0/0:9,0:9:18.04:0,18,193	0/0:13,0:13:21.04:0,21,224	0/0:5,0:5:3:0,3,32	0/0:14,0:14:29.94:0,30,322	0/0:8,0:8:18.04:0,18,193	0/0:5,0:5:15.04:0,15,161	0/0:9,0:9:20.99:0,21,210	0/0:7,0:7:12.03:0,12,129	0/0:16,0:16:39.08:0,39,410	0/0:9,0:9:14.93:0,15,145	0/0:14,0:14:24.06:0,24,253	0/0:4,0:4:3.01:0,3,32	0/0:3,0:3:9.02:0,9,97	0/0:9,0:9:21.05:0,21,225	0/0:14,0:14:27.52:0,28,282	0/0:6,0:6:15.04:0,15,161
chr10	44146186	.	GGGGAGGGGGAGA	G	5025.81	PASS	AB=0.741;AC=27;AF=0.482;AN=56;BaseQRankSum=5.529;DP=277;FS=2.564;HRun=0;HaplotypeScore=86.0083;InbreedingCoeff=0.5462;MQ=69.00;MQ0=12;MQRankSum=-5.100;QD=32.85;ReadPosRankSum=3.033;VQSLOD=4.0891;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,13:16:18.06:581,18,0	0/0:2,0:2:3.01:0,3,177	0/0:27,0:7:3.01:0,3,32	0/0:26,0:15:8.97:0,9,175	1/1:0,8:8:11.83:190,12,0	0/0:9,0:8:12.04:0,12,524	0/0:6,0:6:9.01:0,9,229	0/1:9,0:7:17.03:19,0,17	0/0:8,0:7:15.05:0,15,686	0/0:7,0:7:9:0,9,211	0/0:4,0:3:3.01:0,3,178	1/1:3,7:10:9.03:317,9,0	1/1:4,8:12:12.04:396,12,0	1/1:2,9:10:27.09:934,27,0	0/0:6,0:6:16.30:0,16,663	0/0:14,0:14:30.10:0,30,1360	0/0:5,0:5:6.02:0,6,276	0/0:5,0:5:3.01:0,3,178	0/1:2,8:10:43.99:324,0,44	1/1:2,9:11:13.20:273,13,0	1/1:15,0:15:3.01:49,3,0	1/1:3,4:7:9.03:289,9,0	1/1:5,7:11:14.91:523,15,0	1/1:1,4:5:6.02:183,6,0	0/0:3,0:2:5.98:0,6,158	0/1:3,3:5:99:218,0,165	1/1:4,12:16:15.05:518,15,0	1/1:1,4:5:6.02:211,6,0
chr10	44154995	.	AAAG	A	2727.57	PASS	AB=0.992;AC=34;AF=0.607;AN=56;BaseQRankSum=5.105;DP=404;FS=41.119;HRun=0;HaplotypeScore=61.7373;InbreedingCoeff=0.2915;MQ=54.41;MQ0=33;MQRankSum=-1.763;QD=9.50;ReadPosRankSum=-2.587;VQSLOD=0.4724;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:12:27.35:322,27,0	0/1:5,0:5:4.42:4,0,194	0/1:13,0:7:3.61:4,0,186	0/1:21,0:11:2.64:3,0,153	1/1:21,0:17:35.14:401,35,0	0/1:11,0:10:8.32:8,0,320	0/0:3,0:3:9.01:0,9,133	0/0:29,0:27:69.70:0,70,1189	0/0:26,0:25:9.27:0,9,751	0/0:26,0:24:41.80:0,42,809	0/0:19,0:17:32.46:0,32,539	1/1:12,0:9:23.60:290,24,0	1/1:7,0:5:8.25:58,8,0	0/1:6,0:6:17:17,0,19	0/1:23,0:19:5.17:5,0,387	0/1:7,0:7:10.78:11,0,140	0/0:14,0:12:10.66:0,11,403	0/1:9,0:6:19.86:20,0,148	0/1:11,1:9:1.71:148,0,2	1/1:7,11:17:25.53:266,26,0	1/1:1,0:1:1.82:5,2,0	1/1:9,0:9:21.54:343,22,0	1/1:6,0:5:4.45:119,4,0	1/1:3,0:1:3.01:51,3,0	0/1:26,0:21:3.51:4,0,597	1/1:34,1:27:7.37:379,7,0	1/1:20,0:17:7.01:423,7,0	1/1:4,0:3:5.52:25,6,0
chr10	44154998	.	G	GA	2568.29	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=6.313;DP=405;FS=6.280;HRun=6;HaplotypeScore=52.8131;InbreedingCoeff=0.8151;MQ=56.80;MQ0=31;MQRankSum=0.330;QD=14.85;ReadPosRankSum=-1.518;VQSLOD=2.5713;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,12:14:30.06:330,30,0	0/0:5,0:5:12.03:0,12,121	0/0:15,0:9:7.58:0,8,181	0/0:23,0:13:0.58:0,1,157	1/1:9,11:16:25.23:235,25,0	0/0:12,0:11:17.73:0,18,183	0/0:3,0:3:8.51:0,9,71	0/0:29,0:27:69.14:0,69,701	0/0:25,0:24:37.27:0,37,408	0/0:23,0:21:44.33:0,44,431	0/0:19,0:17:29.62:0,30,303	1/1:6,6:9:18.72:188,19,0	1/1:5,1:4:4.56:41,5,0	1/1:5,1:6:5.49:48,5,0	0/0:23,0:20:26.67:0,27,229	0/0:7,0:7:10.72:0,11,89	0/0:14,0:12:23.66:0,24,245	0/0:9,0:6:6.58:0,7,88	1/1:5,4:7:15.03:166,15,0	1/1:12,6:17:36.11:429,36,0	1/1:2,0:2:3:25,3,0	1/1:4,7:11:26.97:236,27,0	1/1:4,2:5:9.02:100,9,0	1/1:2,1:1:3:25,3,0	0/0:25,0:20:33.09:0,33,360	1/1:21,13:26:49.05:511,49,0	1/1:12,10:19:37.66:374,38,0	1/1:2,2:3:6.02:71,6,0
chr10	44158645	.	T	TGTGTGC	16989.34	PASS	AB=0.743;AC=45;AF=0.804;AN=56;BaseQRankSum=9.054;DP=679;FS=1.713;HRun=0;HaplotypeScore=242.5199;InbreedingCoeff=0.7537;MQ=53.00;MQ0=7;MQRankSum=-11.344;QD=31.35;ReadPosRankSum=2.215;VQSLOD=4.1170;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:35,0:34:2.06:86,2,0	1/1:4,7:11:15.05:505,15,0	0/0:31,0:16:9.17:0,9,328	0/0:37,0:24:11.65:0,12,259	1/1:20,0:19:15.05:438,15,0	0/0:19,0:19:42.13:0,42,846	0/0:20,0:20:48.12:0,48,1001	1/1:24,0:20:24.08:626,24,0	0/0:29,0:29:75.26:0,75,1637	1/1:36,0:36:77.93:2068,78,0	1/1:19,0:18:15.05:438,15,0	1/1:25,0:25:42.14:1185,42,0	1/1:26,0:26:42.14:1182,42,0	1/1:29,0:29:54.19:1526,54,0	1/1:19,0:19:21.07:608,21,0	1/1:19,0:19:18.06:471,18,0	0/1:17,9:26:12.16:879,0,12	1/1:13,0:13:21:520,21,0	1/1:26,0:24:36.12:949,36,0	1/1:16,0:14:12.04:347,12,0	1/1:30,0:30:2.94:18,3,0	1/1:35,0:33:30.10:875,30,0	1/1:34,0:32:24.08:698,24,0	1/1:17,0:17:8.24:261,8,0	1/1:17,0:16:12.04:347,12,0	1/1:27,0:27:60.21:1649,60,0	1/1:29,0:29:39.13:1059,39,0	1/1:9,0:9:9.03:254,9,0
chr10	44158651	.	C	CGTGTGT	22496.23	PASS	AB=0.992;AC=45;AF=0.804;AN=56;BaseQRankSum=8.805;DP=711;FS=1.552;HRun=0;HaplotypeScore=230.7771;InbreedingCoeff=0.6018;MQ=51.42;MQ0=9;MQRankSum=-11.994;QD=37.00;ReadPosRankSum=4.023;VQSLOD=4.6302;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,22:34:4.75:208,5,0	0/1:12,0:12:6.94:415,0,7	0/1:38,0:19:12.43:12,0,384	0/0:33,0:20:15.45:0,15,321	1/1:5,17:21:15.05:523,15,0	0/0:18,0:18:51.10:0,51,1010	0/0:21,0:21:54.10:0,54,1104	1/1:11,18:27:63.16:1410,63,0	0/0:29,0:29:87.14:0,87,1807	1/1:10,26:37:95.39:3001,95,0	1/1:5,13:17:15.05:523,15,0	1/1:4,22:28:42.14:1404,42,0	1/1:2,23:25:45.15:1536,45,0	1/1:1,31:32:54.19:1845,54,0	1/1:4,13:18:21.07:732,21,0	1/1:4,15:20:18.06:588,18,0	0/1:26,0:26:10.73:660,0,11	1/1:5,9:14:33.11:1060,33,0	1/1:4,19:23:57.02:1621,57,0	1/1:5,12:15:12.04:419,12,0	1/1:17,14:33:3.01:36,3,0	1/1:7,33:38:30.10:1047,30,0	1/1:7,26:32:24.08:836,24,0	1/1:2,17:20:11.41:417,11,0	1/1:3,15:19:12.04:419,12,0	1/1:5,22:27:66.21:2166,66,0	1/1:5,23:29:39.13:1302,39,0	1/1:0,5:6:9.03:314,9,0
chr10	44159720	.	G	GT	19742.62	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-9.846;DP=688;FS=6.774;HRun=2;HaplotypeScore=58.7695;InbreedingCoeff=0.9920;MQ=58.03;MQ0=9;MQRankSum=1.357;QD=34.76;ReadPosRankSum=3.805;VQSLOD=5.1365;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,46:48:99:1831,129,0	1/1:1,14:15:36.12:515,36,0	0/0:27,0:15:36.03:0,36,389	0/0:27,0:17:51.13:0,51,616	1/1:2,31:31:66.18:917,66,0	0/0:15,0:15:45.11:0,45,525	0/0:22,0:22:60.18:0,60,731	1/1:3,13:12:24.07:328,24,0	0/0:29,0:29:87.27:0,87,1077	1/1:0,32:30:90.30:1293,90,0	1/1:2,22:22:57.02:743,57,0	1/1:0,26:26:72.24:1028,72,0	1/1:0,22:21:53.98:754,54,0	1/1:2,26:27:69.23:976,69,0	1/1:0,14:13:33.11:471,33,0	1/1:1,30:31:78.26:1115,78,0	1/1:0,16:15:42.14:605,42,0	1/1:1,22:23:57.19:820,57,0	1/1:2,11:11:27.09:389,27,0	1/1:2,27:29:78.11:1061,78,0	1/1:0,29:28:69.23:988,69,0	1/1:3,31:32:81.27:1161,81,0	1/1:0,28:25:66.22:950,66,0	1/1:0,30:30:75.20:1044,75,0	1/1:0,19:18:48.16:681,48,0	1/1:1,24:23:66.19:913,66,0	1/1:1,25:26:69.23:987,69,0	1/1:0,5:5:12.04:173,12,0
chr10	44160710	.	GCTAT	G	11806.07	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=10.129;DP=561;FS=0.933;HRun=0;HaplotypeScore=78.1447;InbreedingCoeff=0.9618;MQ=63.54;MQ0=18;MQRankSum=-5.252;QD=27.02;ReadPosRankSum=1.407;VQSLOD=4.7707;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,19:24:27.09:490,27,0	1/1:0,8:6:11.87:218,12,0	0/0:25,0:21:62.57:0,63,1303	0/0:21,0:20:57.12:0,57,1385	1/1:3,30:26:63.15:1103,63,0	0/0:32,0:32:87.30:0,87,2251	0/0:22,0:22:60.21:0,60,1555	1/1:5,8:6:8.99:102,9,0	0/0:24,0:24:66.23:0,66,1692	1/1:1,22:16:39.12:648,39,0	1/1:2,17:15:29.97:461,30,0	1/1:1,24:18:36.12:652,36,0	1/1:0,14:11:15.05:272,15,0	1/1:2,21:19:33.11:598,33,0	1/1:1,15:11:24.08:436,24,0	1/1:0,15:12:27.09:490,27,0	1/1:1,15:12:27.09:488,27,0	1/1:1,5:6:12.04:218,12,0	1/1:3,14:12:30.02:421,30,0	1/1:4,23:23:32.92:489,33,0	1/1:6,21:24:35.83:617,36,0	1/1:1,12:10:15.05:271,15,0	1/1:0,14:14:39.13:704,39,0	1/1:1,17:16:23.66:435,24,0	1/1:2,11:11:21.07:382,21,0	1/1:1,21:21:45.02:787,45,0	1/1:0,32:30:60.21:1088,60,0	1/1:0,14:13:24.08:436,24,0
chr10	44171120	.	TC	T	165.80	PASS	AC=16;AF=0.615;AN=26;BaseQRankSum=3.662;DP=98;FS=19.497;HRun=1;HaplotypeScore=20.2726;InbreedingCoeff=0.6508;MQ=95.40;MQ0=0;MQRankSum=-4.540;QD=12.75;ReadPosRankSum=-5.074;VQSLOD=-0.5553;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:11,0:11:30.56:0,31,412	0/0:14,0:12:33.08:0,33,435	1/1:1,0:1:2.97:20,3,0	0/0:25,0:25:72.20:0,72,992	0/0:15,0:15:45.11:0,45,588	1/1:3,0:3:9:77,9,0	0/0:18,0:18:54.13:0,54,748	1/1:0,1:1:2.60:10,3,0	1/1:0,2:2:3.01:37,3,0	./.	./.	./.	./.	./.	./.	1/1:0,1:1:3.01:36,3,0	./.	./.	1/1:0,1:1:2.98:22,3,0	1/1:2,1:3:7.54:62,8,0	1/1:1,0:1:2.98:21,3,0	./.	./.	./.	./.	./.
chr10	44171530	.	CT	C	15087.32	PASS	AB=0.519;AC=45;AF=0.804;AN=56;BaseQRankSum=12.854;DP=603;FS=3.781;HRun=5;HaplotypeScore=150.8494;InbreedingCoeff=0.9096;MQ=66.30;MQ0=1;MQRankSum=-5.786;QD=30.17;ReadPosRankSum=3.781;VQSLOD=2.8290;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,29:29:69.20:782,69,0	1/1:0,5:5:15.04:170,15,0	0/0:21,0:19:33.18:0,33,606	0/0:35,0:33:87.26:0,87,1147	1/1:1,34:35:96.27:1088,96,0	0/0:17,0:17:48.16:0,48,657	0/0:11,0:11:33.11:0,33,451	1/1:0,26:26:78.19:863,78,0	0/0:19,0:19:51.17:0,51,697	1/1:2,28:30:84.22:941,84,0	1/1:0,26:26:75.21:850,75,0	1/1:0,13:13:36.10:408,36,0	1/1:0,17:17:48.14:544,48,0	1/1:1,13:14:30.09:340,30,0	1/1:2,11:13:33.09:374,33,0	0/1:1,13:14:4.86:338,0,5	1/1:3,21:24:63.18:714,63,0	1/1:4,17:20:36.10:408,36,0	1/1:1,15:16:45.13:510,45,0	1/1:0,32:32:93.26:1054,93,0	1/1:1,17:18:48.14:544,48,0	1/1:3,24:27:72.21:816,72,0	1/1:0,33:33:84.24:952,84,0	1/1:0,19:19:54.15:612,54,0	1/1:1,15:16:45.13:510,45,0	1/1:2,24:26:72.19:807,72,0	1/1:0,32:32:93.27:1054,93,0	1/1:0,13:13:36.10:408,36,0
chr10	44172230	.	C	CT	319.73	PASS	AB=0.928;AC=5;AF=0.089;AN=56;BaseQRankSum=-2.166;DP=369;FS=0.000;HRun=9;HaplotypeScore=73.6961;InbreedingCoeff=0.3135;MQ=58.73;MQ0=5;MQRankSum=-0.655;QD=6.03;ReadPosRankSum=-3.570;VQSLOD=0.3595;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:35.99:0,36,312	0/0:5,0:5:9:0,9,78	0/1:18,0:11:16.55:17,0,84	0/0:17,0:7:11.91:0,12,91	0/0:22,0:22:56.97:0,57,492	0/0:10,0:10:26.98:0,27,234	0/0:6,0:6:18:0,18,156	1/1:4,14:18:36.10:396,36,0	0/0:8,0:8:20.98:0,21,182	0/0:25,0:25:71.98:0,72,625	0/0:21,0:21:50.97:0,51,442	0/0:9,0:10:14.99:0,15,130	0/0:13,0:13:26.99:0,27,234	0/0:7,0:6:11.99:0,12,102	0/1:9,1:10:9.18:9,0,155	0/0:10,0:10:29.99:0,30,260	0/0:10,0:10:11.97:0,12,104	0/0:10,0:11:23.03:0,23,188	0/0:10,0:10:26.96:0,27,227	0/0:25,0:25:65.96:0,66,567	0/1:6,1:6:18.17:18,0,88	0/0:7,0:7:20.99:0,21,180	0/0:15,0:15:35.96:0,36,310	0/0:9,0:9:23.99:0,24,206	0/0:19,0:19:47.97:0,48,414	0/0:19,0:19:50.96:0,51,437	0/0:16,0:16:35.99:0,36,311	0/0:7,0:7:11.99:0,12,104
chr10	44172324	.	TC	T	5268.11	PASS	AC=46;AF=0.852;AN=54;BaseQRankSum=4.308;DP=268;FS=3.671;HRun=6;HaplotypeScore=38.9978;InbreedingCoeff=0.6230;MQ=34.09;MQ0=41;MQRankSum=-0.931;QD=21.59;ReadPosRankSum=1.689;VQSLOD=3.8342;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,23:16:36.12:464,36,0	1/1:0,2:1:3.01:39,3,0	./.	0/0:7,0:2:5.99:0,6,66	1/1:3,15:8:18.06:233,18,0	0/0:3,0:3:9.03:0,9,135	0/0:3,0:2:3.01:0,3,45	1/1:6,4:3:6.02:78,6,0	0/0:4,0:2:3.01:0,3,45	1/1:1,8:6:15.05:195,15,0	1/1:0,17:14:33.11:428,33,0	1/1:0,8:4:12.04:156,12,0	1/1:0,10:9:24.08:311,24,0	1/1:1,9:7:12.04:156,12,0	1/1:0,8:4:9.03:117,9,0	1/1:1,3:3:3.01:39,3,0	1/1:0,4:4:6.02:78,6,0	1/1:0,5:5:12.04:156,12,0	1/1:0,3:2:6.02:78,6,0	1/1:0,15:10:21.07:272,21,0	1/1:1,5:3:9.03:117,9,0	1/1:0,15:8:18.06:234,18,0	1/1:1,12:10:24.08:311,24,0	1/1:0,6:6:15.05:195,15,0	1/1:0,12:11:30.10:384,30,0	1/1:1,19:14:42.12:529,42,0	1/1:1,16:14:39.13:506,39,0	1/1:1,6:5:15.05:195,15,0
chr10	44175028	.	A	AT	1811.46	PASS	AB=1.000;AC=37;AF=0.804;AN=46;BaseQRankSum=0.670;DP=321;FS=24.653;HRun=5;HaplotypeScore=21.6597;InbreedingCoeff=0.5686;MQ=35.45;MQ0=80;MQRankSum=-3.538;QD=8.92;ReadPosRankSum=-0.628;VQSLOD=-0.5751;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,8:5:11.95:132,12,0	1/1:0,4:2:3.01:39,3,0	0/1:22,0:8:1.23:1,0,135	0/0:25,0:2:6.02:0,6,64	1/1:3,13:6:3.01:39,3,0	0/0:24,0:22:39.05:0,39,405	0/0:17,0:13:23.99:0,24,243	./.	0/0:29,0:24:48:0,48,487	1/1:2,7:1:3:25,3,0	1/1:0,10:3:9.03:118,9,0	1/1:1,4:3:6.02:78,6,0	./.	./.	1/1:2,8:7:9.03:118,9,0	./.	1/1:3,5:6:15.04:177,15,0	1/1:2,3:3:6.02:79,6,0	1/1:4,3:2:6.02:79,6,0	1/1:2,18:11:26.87:289,27,0	1/1:2,8:9:18.06:237,18,0	1/1:2,7:3:6.02:76,6,0	1/1:2,8:5:3.01:39,3,0	1/1:0,3:2:6.02:76,6,0	1/1:0,13:9:17.97:198,18,0	1/1:11,11:5:9.03:118,9,0	1/1:3,3:4:3.01:39,3,0	./.
chr10	44181220	.	CT	C	241.92	PASS	AC=4;AF=0.074;AN=54;BaseQRankSum=2.209;DP=355;FS=5.512;HRun=1;HaplotypeScore=41.7335;InbreedingCoeff=0.6501;MQ=38.38;MQ0=98;MQRankSum=-0.408;QD=9.30;ReadPosRankSum=0.643;VQSLOD=1.1532;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:12:18.06:0,18,247	1/1:2,5:5:12.01:146,12,0	./.	0/0:7,0:1:3.01:0,3,43	0/0:18,0:15:21:0,21,274	0/0:8,0:4:12.04:0,12,171	0/0:10,0:8:24.05:0,24,296	0/0:9,0:4:9:0,9,93	0/0:10,0:7:18.06:0,18,254	0/0:19,0:16:45.13:0,45,609	0/0:16,0:10:17.98:0,18,213	0/0:6,0:4:6.01:0,6,67	0/0:14,0:13:27.06:0,27,348	0/0:7,0:6:18.05:0,18,237	0/0:3,0:3:3.01:0,3,42	0/0:9,0:6:18.05:0,18,239	1/1:0,19:15:15.05:207,15,0	0/0:14,0:12:27.05:0,27,345	0/0:12,0:7:18.03:0,18,222	0/0:15,0:12:30.06:0,30,403	0/0:9,0:4:9.03:0,9,128	0/0:18,0:15:17.91:0,18,232	0/0:13,0:8:15.04:0,15,213	0/0:15,0:10:18.06:0,18,256	0/0:20,0:15:23.88:0,24,295	0/0:25,0:20:60.16:0,60,789	0/0:21,0:19:53.92:0,54,653	0/0:9,0:2:3.01:0,3,43
chr10	44181815	.	CTGT	C	1358.73	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.602;DP=651;FS=1.560;HRun=0;HaplotypeScore=92.2227;InbreedingCoeff=0.9978;MQ=81.24;MQ0=0;MQRankSum=-3.619;QD=42.46;ReadPosRankSum=2.768;VQSLOD=5.1538;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,123,2890	1/1:1,10:11:27.09:476,27,0	0/0:26,0:26:72.19:0,72,1457	0/0:25,0:25:69.04:0,69,1352	0/0:17,0:17:51.18:0,51,1205	0/0:16,0:16:48.13:0,48,1040	0/0:23,0:23:69.21:0,69,1539	0/0:27,0:27:81.26:0,81,1767	0/0:36,0:36:99:0,108,2416	0/0:22,0:22:56.78:0,57,1236	0/0:26,0:26:75.23:0,75,1657	0/0:20,0:20:60.19:0,60,1331	0/0:16,0:16:45.14:0,45,1016	0/0:17,0:17:48.16:0,48,1135	0/0:22,0:22:66.23:0,66,1539	0/0:18,0:18:54.19:0,54,1272	1/1:0,21:21:57.20:1004,57,0	0/0:8,0:8:24.08:0,24,567	0/0:24,0:24:69.22:0,69,1552	0/0:29,0:29:84.25:0,84,1842	0/0:62,0:62:99:0,184,4252	0/0:25,0:25:75.26:0,75,1772	0/0:21,0:21:60.20:0,60,1356	0/0:24,0:24:72.25:0,72,1674	0/0:9,0:9:27.09:0,27,634	0/0:23,0:23:69.24:0,69,1632	0/0:28,0:28:81.26:0,81,1779	0/0:13,0:13:36.12:0,36,851
chr10	44187630	.	TGTTCTCA	T	1524.16	PASS	AB=0.711;AC=9;AF=0.188;AN=48;BaseQRankSum=5.395;DP=763;FS=7.978;HRun=0;HaplotypeScore=57.7346;InbreedingCoeff=0.6050;MQ=23.34;MQ0=272;MQRankSum=-2.843;QD=15.88;ReadPosRankSum=2.989;VQSLOD=1.0605;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:89,0:34:27.09:0,27,980	0/0:13,0:6:9.03:0,9,344	./.	./.	0/0:38,0:26:48.16:0,48,1771	0/0:21,0:14:18.06:0,18,631	0/0:25,0:4:9.03:0,9,356	./.	0/0:28,0:17:18.06:0,18,664	0/1:16,11:14:73.67:662,0,74	1/1:15,16:14:24.08:615,24,0	0/0:13,0:6:9.03:0,9,334	0/0:19,0:13:11.70:0,12,414	0/0:17,0:10:9.03:0,9,316	1/1:6,3:4:3.01:77,3,0	1/1:7,4:5:9.03:231,9,0	./.	0/0:16,2:3:6.02:0,6,187	0/0:21,0:5:15.05:0,15,580	0/0:39,0:22:48.16:0,48,1851	0/0:60,0:13:6.02:0,6,236	0/0:34,0:22:36.12:0,36,1333	0/0:34,0:16:17.94:0,18,597	0/0:37,0:15:9.03:0,9,301	1/1:10,8:6:3.01:77,3,0	0/0:32,0:15:39.10:0,39,1379	0/0:20,0:14:27.09:0,27,1066	0/0:15,0:4:9.03:0,9,357
chr10	44187787	.	A	ATGTCCATACATA	11691.46	PASS	AB=0.904;AC=35;AF=0.648;AN=54;BaseQRankSum=10.078;DP=436;FS=5.327;HRun=0;HaplotypeScore=204.9785;InbreedingCoeff=0.2298;MQ=46.72;MQ0=16;MQRankSum=-8.056;QD=37.59;ReadPosRankSum=4.186;VQSLOD=4.2062;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:18,0:21:76.45:781,0,76	1/1:2,0:2:3.01:80,3,0	0/0:26,0:21:62.02:0,62,2013	0/0:25,0:19:46.15:0,46,1568	1/1:10,0:6:7.99:146,8,0	0/0:19,0:17:39.05:0,39,1217	0/0:25,0:24:63.17:0,63,2120	0/1:31,0:18:99:303,0,146	0/0:30,0:29:69.18:0,69,2117	1/1:7,0:6:18.06:505,18,0	0/1:13,0:10:31.84:565,0,32	0/1:8,0:11:28.85:948,0,29	0/1:15,0:14:55.32:875,0,55	0/1:11,0:10:95.06:578,0,95	1/1:10,0:12:24.01:926,24,0	1/1:12,0:11:24.08:1081,24,0	1/1:12,0:8:14.84:349,15,0	1/1:6,0:6:8.39:282,8,0	0/1:14,1:12:1.18:938,0,1	1/1:10,0:14:32.98:893,33,0	1/1:10,0:8:8.64:186,9,0	1/1:8,0:6:6.02:185,6,0	0/1:15,0:10:86.22:86,0,106	1/1:10,0:12:14.64:374,15,0	1/1:11,0:11:14.71:500,15,0	0/1:16,0:11:70.97:583,0,71	1/1:13,0:12:17.54:527,18,0	./.
chr10	44188779	.	CCTCTCTCTCTCTGACTCTCTCCCTTCTGACTCTCTCTCTTCTGACT	C	3987.88	PASS	AB=0.817;AC=24;AF=0.462;AN=52;BaseQRankSum=6.558;DP=575;FS=5.843;HRun=0;HaplotypeScore=495.8774;InbreedingCoeff=0.6479;MQ=84.31;MQ0=6;MQRankSum=-3.398;QD=16.76;ReadPosRankSum=0.012;VQSLOD=0.3653;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:21:15.85:442,16,0	0/0:10,0:10:27.09:0,27,2585	0/1:64,0:44:5.93:6,0,870	0/0:118,0:64:23.93:0,24,1083	1/1:7,14:21:5.98:96,6,0	0/0:18,0:18:36.11:0,36,2329	0/0:23,0:23:51.11:0,51,3267	0/0:29,0:29:54.18:0,54,2580	0/0:14,0:13:24.08:0,24,2109	0/0:19,0:19:36.12:0,36,2889	0/0:11,0:11:27.09:0,27,2704	1/1:7,0:6:5.81:237,6,0	./.	1/1:6,0:6:12.04:479,12,0	0/0:17,0:17:44.74:0,45,3434	0/0:19,0:19:51.18:0,51,4387	0/1:26,0:26:99:136,0,4388	0/0:20,0:20:42.14:0,42,3524	1/1:7,0:8:15.03:336,15,0	1/1:5,7:12:3.01:72,3,0	1/1:6,0:6:7.27:230,7,0	./.	0/1:6,12:18:0:0,0,0	1/1:16,0:16:17.80:576,18,0	0/0:12,0:12:24.08:0,24,2190	0/1:8,8:16:99:635,0,112	1/1:7,0:7:6.02:190,6,0	1/1:10,0:10:9.03:553,9,0
chr10	44188798	.	CTCCCTT	C	1632.27	PASS	AB=0.748;AC=12;AF=0.250;AN=48;BaseQRankSum=7.011;DP=550;FS=15.048;HRun=0;HaplotypeScore=136.7684;InbreedingCoeff=-0.0119;MQ=75.15;MQ0=19;MQRankSum=-4.066;QD=17.94;ReadPosRankSum=-1.534;VQSLOD=2.1700;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:5,6:11:55.09:245,0,55	0/0:10,0:10:30.10:0,30,1093	0/0:67,0:30:4.43:0,4,919	0/0:134,1:51:53.78:0,54,1151	./.	0/0:19,0:19:54.17:0,54,1687	0/0:21,0:21:63.13:0,63,2046	0/0:30,0:29:87.28:0,87,2983	0/0:17,0:16:42.14:0,42,1389	0/0:19,0:19:54.19:0,54,1973	0/0:14,0:14:38.96:0,39,1337	0/1:2,3:3:7.95:143,0,8	./.	0/1:2,3:4:25.85:218,0,26	0/0:20,0:20:50.64:0,51,1778	0/0:22,0:22:63.22:0,63,2290	0/0:28,1:29:46.98:0,47,2241	0/1:18,1:19:3.38:3,0,1583	1/1:1,4:5:15.03:297,15,0	./.	0/1:2,2:4:31.79:71,0,32	./.	0/1:12,0:12:0:0,0,0	0/1:5,7:12:29.60:306,0,30	0/0:15,0:15:33.11:0,33,1211	0/1:10,0:10:99:278,0,139	0/1:2,2:4:17.05:144,0,17	0/1:2,2:4:66.45:68,0,66
chr10	44188801	.	CCT	C	761.17	PASS	AB=0.970;AC=19;AF=0.396;AN=48;BaseQRankSum=10.082;DP=541;FS=2.899;HRun=0;HaplotypeScore=109.7310;InbreedingCoeff=0.7544;MQ=71.51;MQ0=22;MQRankSum=-7.566;QD=5.56;ReadPosRankSum=-0.846;VQSLOD=2.8619;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:8,4:11:16.72:174,17,0	0/0:10,0:10:30.10:0,30,590	0/1:64,0:24:3.38:3,0,525	0/0:132,2:48:31.10:0,31,698	./.	0/0:18,0:18:51.17:0,51,956	0/0:20,0:20:57.15:0,57,1069	0/0:30,0:28:84.28:0,84,1649	0/0:18,0:17:45.15:0,45,862	0/0:20,0:20:60.21:0,60,1176	0/0:14,0:14:39.09:0,39,743	1/1:3,2:3:8.74:50,9,0	./.	1/1:3,2:4:11.53:91,12,0	0/0:19,0:19:48.04:0,48,930	0/0:22,0:22:63.20:0,63,1236	0/0:28,0:28:44.90:0,45,1236	0/0:18,0:18:34.68:0,35,843	1/1:4,0:4:8.52:41,9,0	./.	1/1:3,1:4:5.85:63,6,0	./.	0/1:12,0:12:0:0,0,0	1/1:9,3:12:17.53:155,18,0	0/0:15,0:15:33.11:0,33,661	0/1:9,1:10:40.66:146,0,41	1/1:2,2:4:11.70:104,12,0	1/1:2,2:4:8.86:112,9,0
chr10	44188822	.	G	GAC	2006.76	PASS	AB=1.000;AC=23;AF=0.426;AN=54;BaseQRankSum=8.609;DP=626;FS=13.577;HRun=0;HaplotypeScore=110.5205;InbreedingCoeff=0.7599;MQ=69.77;MQ0=32;MQRankSum=-5.595;QD=20.90;ReadPosRankSum=-1.719;VQSLOD=3.2215;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,10:12:21.02:421,21,0	0/0:12,0:12:36.09:0,36,482	0/0:104,0:32:24.86:0,25,555	0/0:152,0:55:52.05:0,52,673	1/1:14,0:14:2.84:38,3,0	0/0:19,0:19:54.16:0,54,755	0/0:21,0:21:57.52:0,58,735	0/0:31,0:28:75.15:0,75,962	0/0:22,0:21:47.63:0,48,629	0/0:22,0:22:63.19:0,63,851	0/0:17,0:17:45.08:0,45,598	1/1:2,3:4:6.02:100,6,0	1/1:1,1:2:3.01:42,3,0	1/1:0,5:4:12.04:214,12,0	0/0:16,0:16:39.33:0,39,516	0/0:18,0:18:51.15:0,51,713	0/0:34,0:34:75.20:0,75,1024	0/0:20,0:20:44.78:0,45,573	1/1:3,2:2:6.02:109,6,0	1/1:7,0:7:3.01:54,3,0	1/1:3,3:6:9.03:159,9,0	./.	0/0:12,0:12:0:0,0,0	1/1:5,11:16:19.99:396,20,0	0/0:12,0:12:24.07:0,24,334	0/1:10,0:10:64.81:147,0,65	1/1:4,5:9:27.09:414,27,0	1/1:2,2:4:6.02:107,6,0
chr10	44188823	.	A	ACC	1300.92	PASS	AB=1.000;AC=23;AF=0.426;AN=54;BaseQRankSum=8.626;DP=626;FS=9.340;HRun=1;HaplotypeScore=111.5829;InbreedingCoeff=0.7597;MQ=70.37;MQ0=31;MQRankSum=-4.179;QD=13.55;ReadPosRankSum=-0.303;VQSLOD=-0.1372;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,1:12:19.46:271,19,0	0/0:12,0:12:36.09:0,36,502	0/0:107,0:32:35.07:0,35,576	0/0:152,1:55:77.43:0,77,807	1/1:14,0:14:2.84:40,3,0	0/0:19,0:19:54.16:0,54,782	0/0:21,0:21:57.07:0,57,759	0/0:28,0:25:75.21:0,75,1033	0/0:22,0:21:48.11:0,48,641	0/0:22,0:22:63.19:0,63,879	0/0:17,0:17:45.08:0,45,620	1/1:5,0:4:6.02:68,6,0	1/1:2,0:2:3.01:32,3,0	1/1:5,0:4:12.03:135,12,0	0/0:16,0:16:39.56:0,40,534	0/0:18,0:18:51.15:0,51,739	0/0:33,0:33:66.61:0,67,1050	0/0:21,0:21:47.75:0,48,612	1/1:5,0:2:6.02:73,6,0	1/1:7,0:7:3.01:36,3,0	1/1:5,1:6:9.03:107,9,0	./.	0/0:12,0:12:0:0,0,0	1/1:15,0:16:19.50:268,20,0	0/0:12,0:12:24.07:0,24,346	0/1:10,0:10:66.37:91,0,66	1/1:6,3:9:27.07:309,27,0	1/1:4,0:4:6.02:66,6,0
chr10	44195103	.	G	GA	466.79	PASS	AC=4;AF=0.077;AN=52;BaseQRankSum=-2.365;DP=709;FS=1.063;HRun=2;HaplotypeScore=60.3428;InbreedingCoeff=0.9313;MQ=40.81;MQ0=91;MQRankSum=1.118;QD=13.34;ReadPosRankSum=2.648;VQSLOD=2.7902;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:29:42.14:0,42,541	1/1:1,9:8:18.06:269,18,0	./.	./.	0/0:34,0:28:44.91:0,45,567	0/0:27,0:18:30.10:0,30,389	0/0:12,0:10:24.07:0,24,293	0/0:26,0:12:33.11:0,33,426	0/0:25,0:21:39.13:0,39,505	0/0:27,0:23:66.20:0,66,844	0/0:27,0:26:39.12:0,39,488	0/0:22,0:16:29.75:0,30,389	0/0:41,0:20:29.93:0,30,389	0/0:41,0:16:33.11:0,33,421	0/0:32,0:19:21.07:0,21,273	0/0:24,0:16:27.07:0,27,335	1/1:5,20:19:21.07:315,21,0	0/0:12,0:11:18.06:0,18,233	0/0:30,0:17:51.17:0,51,661	0/0:35,0:30:87.28:0,87,1103	0/0:21,0:16:30.05:0,30,382	0/0:24,0:20:36.12:0,36,467	0/0:33,0:31:44.93:0,45,542	0/0:17,0:16:21.07:0,21,273	0/0:22,0:18:32.80:0,33,423	0/0:36,0:29:84.27:0,84,1084	0/0:37,0:23:35.99:0,36,431	0/0:8,0:7:6.02:0,6,78
chr10	44195582	.	A	AG	400.80	PASS	AB=0.583;AC=3;AF=0.054;AN=56;BaseQRankSum=4.012;DP=505;FS=4.974;HRun=1;HaplotypeScore=67.3105;InbreedingCoeff=0.7758;MQ=76.08;MQ0=0;MQRankSum=0.157;QD=20.04;ReadPosRankSum=-0.168;VQSLOD=3.6106;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:90.29:0,90,1167	0/1:2,5:7:2.89:116,0,3	0/0:17,0:17:46.73:0,47,565	0/0:20,0:19:13.40:0,13,598	0/0:26,0:26:75.23:0,75,959	0/0:13,0:13:39.13:0,39,506	0/0:16,0:16:48.14:0,48,600	0/0:19,0:19:57.19:0,57,740	0/0:16,0:16:48.16:0,48,623	0/0:17,0:17:45.14:0,45,573	0/0:14,0:14:39.13:0,39,506	0/0:15,0:15:34.16:0,34,182	0/0:9,0:9:25.24:0,25,118	0/0:10,0:10:26.85:0,27,151	0/0:17,0:17:51.15:0,51,646	0/0:16,0:16:48.15:0,48,616	1/1:2,11:13:33.08:391,33,0	0/0:19,0:19:51.12:0,51,643	0/0:21,0:21:60.16:0,60,750	0/0:27,0:27:69.22:0,69,896	0/0:38,0:38:99:0,111,1407	0/0:12,0:12:24.67:0,25,170	0/0:23,0:23:50.88:0,51,288	0/0:25,0:25:62.68:0,63,333	0/0:14,0:14:39.11:0,39,490	0/0:14,0:14:39.13:0,39,506	0/0:21,0:21:60.17:0,60,760	0/0:14,0:14:33.11:0,33,428
chr10	44195584	.	A	AG	3149.29	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-3.265;DP=503;FS=0.000;HRun=7;HaplotypeScore=55.3008;InbreedingCoeff=0.9560;MQ=76.16;MQ0=0;MQRankSum=-0.605;QD=27.63;ReadPosRankSum=3.563;VQSLOD=4.1887;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:84.13:0,84,811	1/1:7,0:7:0.30:137,0,0	0/0:17,0:17:44.50:0,45,390	0/0:19,0:18:28.58:0,29,347	0/0:25,0:25:66.10:0,66,637	0/0:13,0:13:39.06:0,39,377	0/0:16,0:16:42.06:0,42,405	0/0:21,0:21:51.07:0,51,493	0/0:17,0:17:45.07:0,45,435	0/0:15,0:15:42.07:0,42,405	0/0:15,0:15:42.05:0,42,399	1/1:0,15:15:39.12:471,39,0	1/1:0,9:9:27.08:326,27,0	1/1:1,9:10:27.08:325,27,0	0/0:18,0:18:45.03:0,45,427	0/0:16,0:16:42.07:0,42,406	1/1:12,0:12:33.10:393,33,0	0/0:17,0:17:45.06:0,45,434	0/0:20,0:20:57.08:0,57,546	0/0:26,0:26:75.12:0,75,723	0/0:39,0:39:99:0,105,1008	1/1:2,10:12:24.07:290,24,0	1/1:3,20:23:54.16:646,54,0	1/1:1,25:26:63.19:761,63,0	0/0:14,0:14:36.06:0,36,347	0/0:17,0:17:42.05:0,42,401	0/0:19,0:19:51.08:0,51,493	0/0:14,0:14:33.05:0,33,319
chr10	44204649	.	G	GA	257.55	PASS	AC=10;AF=0.714;AN=14;BaseQRankSum=-2.431;DP=90;FS=6.990;HRun=0;HaplotypeScore=10.4709;MQ=17.25;MQ0=20;MQRankSum=-0.150;QD=16.10;ReadPosRankSum=0.772;VQSLOD=4.3903;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	./.	./.	./.	./.	0/0:27,0:8:18.06:0,18,216	1/1:2,1:1:3.01:43,3,0	1/1:2,2:2:6.02:86,6,0	./.	./.	./.	./.	0/0:1,0:1:3.01:0,3,36	./.	./.	./.	1/1:1,3:2:6.02:86,6,0	./.	./.	./.	./.	1/1:0,2:2:3.01:43,3,0	./.	./.	1/1:1,2:2:6.02:86,6,0
chr10	44206803	.	TG	T	4560.42	PASS	AB=0.615;AC=45;AF=0.804;AN=56;BaseQRankSum=4.483;DP=252;FS=20.845;HRun=7;HaplotypeScore=38.6853;InbreedingCoeff=0.6966;MQ=59.84;MQ0=1;MQRankSum=-0.972;QD=20.27;ReadPosRankSum=3.504;VQSLOD=3.1707;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,10:13:15.03:153,15,0	1/1:1,6:6:9.02:92,9,0	0/0:6,0:5:15.03:0,15,166	0/0:13,0:13:20.32:0,20,210	1/1:4,1:5:11.99:113,12,0	0/0:2,0:2:6.02:0,6,75	0/0:3,0:3:5.99:0,6,59	1/1:1,13:9:24.04:236,24,0	0/0:3,0:3:6.02:0,6,75	1/1:1,2:3:6.01:61,6,0	1/1:2,1:3:3:31,3,0	1/1:3,4:7:12.02:121,12,0	1/1:4,5:9:18.03:182,18,0	1/1:5,9:14:26.97:256,27,0	1/1:3,9:12:27.06:275,27,0	0/1:3,5:7:31.43:74,0,31	1/1:1,13:13:33.07:334,33,0	1/1:1,6:7:15.03:153,15,0	1/1:2,11:13:33.06:330,33,0	1/1:0,4:4:9.02:91,9,0	1/1:3,21:24:57.13:580,57,0	1/1:3,6:9:21.03:205,21,0	1/1:2,4:6:9.02:91,9,0	1/1:4,12:16:27.06:275,27,0	1/1:1,5:6:15.01:144,15,0	1/1:1,7:8:18.04:184,18,0	1/1:1,12:12:30.07:306,30,0	1/1:0,10:10:27.06:275,27,0
chr10	44206979	.	G	GT	2227.03	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-6.987;DP=478;FS=8.169;HRun=8;HaplotypeScore=54.9886;InbreedingCoeff=0.9980;MQ=64.55;MQ0=0;MQRankSum=1.051;QD=25.02;ReadPosRankSum=2.405;VQSLOD=4.3962;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:96.05:0,96,879	0/0:12,0:12:33.02:0,33,302	0/0:14,0:13:35.15:0,35,271	0/0:18,0:18:33.71:0,34,274	0/0:17,0:17:42.01:0,42,384	0/0:12,0:12:30.01:0,30,275	0/0:13,0:13:36.02:0,36,329	0/0:26,1:27:34.38:0,34,561	0/0:12,0:12:27.01:0,27,247	1/1:4,12:16:36.09:406,36,0	1/1:1,23:24:66.20:762,66,0	0/0:17,0:17:42.01:0,42,384	0/0:11,0:11:33.02:0,33,302	0/0:14,0:14:39.02:0,39,356	1/1:1,10:11:24.07:277,24,0	1/1:1,9:10:24.07:277,24,0	0/0:22,0:22:57.02:0,57,521	1/1:0,13:13:33.10:381,33,0	0/0:25,1:26:31.39:0,31,534	0/0:22,0:22:63.03:0,63,575	0/0:13,0:13:30.01:0,30,275	0/0:18,0:18:54.03:0,54,493	0/0:16,0:16:48.03:0,48,439	0/0:18,0:18:54.01:0,54,488	1/1:4,11:15:27.08:312,27,0	0/0:17,0:17:42.02:0,42,384	0/0:20,0:20:48.02:0,48,439	0/0:13,0:13:33.02:0,33,302
chr10	44208264	.	G	GTT	138.01	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-1.059;DP=530;FS=2.527;HRun=1;HaplotypeScore=116.5621;InbreedingCoeff=0.8784;MQ=63.26;MQ0=3;MQRankSum=0.532;QD=7.67;ReadPosRankSum=-1.905;VQSLOD=-0.2932;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:50.29:0,50,197	1/1:3,5:9:8.86:104,9,0	0/0:20,0:12:32.44:0,32,401	0/0:22,0:16:35.52:0,36,424	0/0:32,0:32:41.29:0,41,152	0/0:22,0:22:63.21:0,63,953	0/0:20,0:20:60.18:0,60,871	0/0:29,0:28:11.03:0,11,144	0/0:25,0:25:69.20:0,69,1012	0/0:19,0:19:40.28:0,40,153	0/0:23,0:23:11.08:0,11,86	0/0:12,0:12:25.16:0,25,94	0/0:8,0:8:20.27:0,20,76	0/0:14,0:14:30.35:0,30,114	0/0:18,0:18:36.59:0,37,146	0/0:9,0:9:17.67:0,18,66	1/1:2,6:8:9.91:140,10,0	0/0:7,0:7:14.95:0,15,56	0/0:23,0:22:36.46:0,36,135	0/0:24,0:24:51.13:0,51,190	0/0:15,0:15:34.93:0,35,131	0/0:25,0:25:42.59:0,43,161	0/0:18,0:18:26.12:0,26,100	0/0:16,0:16:33:0,33,132	0/0:15,0:15:27.65:0,28,104	0/0:24,0:24:25.48:0,25,180	0/0:19,0:19:14.74:0,15,131	0/0:28,0:28:42.62:0,43,160
chr10	44208265	.	TG	T	12922.83	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=6.240;DP=524;FS=0.000;HRun=1;HaplotypeScore=60.6824;InbreedingCoeff=0.9847;MQ=64.28;MQ0=3;MQRankSum=-2.053;QD=30.99;ReadPosRankSum=1.771;VQSLOD=4.4738;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,20:25:65.97:884,66,0	1/1:9,0:8:10.84:52,11,0	0/0:21,0:13:26.61:0,27,369	0/0:21,0:16:27.39:0,27,347	1/1:0,31:31:71.79:791,72,0	0/0:21,0:21:63.14:0,63,852	0/0:20,0:20:60.13:0,60,779	1/1:1,28:28:78.12:993,78,0	0/0:24,0:24:69.18:0,69,908	1/1:0,19:19:54.17:720,54,0	1/1:1,22:23:47.95:554,48,0	1/1:0,12:12:30.10:417,30,0	1/1:0,8:8:24.08:332,24,0	1/1:0,14:14:36.12:499,36,0	1/1:5,13:18:45.60:587,46,0	1/1:0,9:9:21.07:292,21,0	1/1:9,0:9:17.61:120,18,0	1/1:0,7:7:18.06:250,18,0	1/1:1,22:22:63.05:747,63,0	1/1:0,24:24:63.17:845,63,0	1/1:0,14:14:42.14:584,42,0	1/1:0,25:25:54.14:720,54,0	1/1:3,15:18:35.66:428,36,0	1/1:1,15:16:32.93:495,33,0	1/1:0,15:15:33.11:458,33,0	1/1:1,23:24:45.77:823,46,0	1/1:5,14:19:43.67:625,44,0	1/1:0,26:26:51.17:708,51,0
chr10	44220845	.	T	TA	3341.22	PASS	AC=32;AF=1.000;AN=32;DP=110;FS=0.000;HRun=0;HaplotypeScore=115.0133;InbreedingCoeff=-0.0452;MQ=27.16;MQ0=0;QD=30.37;VQSLOD=3.2946;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	1/1:0,5:5:15.05:201,15,0	./.	./.	1/1:0,16:13:23.80:304,24,0	1/1:1,2:3:6.02:83,6,0	./.	./.	1/1:0,3:3:9.03:125,9,0	1/1:0,11:9:27.09:384,27,0	1/1:0,9:6:15.04:182,15,0	1/1:0,2:2:6.01:67,6,0	1/1:0,4:4:12.04:167,12,0	./.	1/1:0,1:1:3.01:42,3,0	1/1:0,1:1:3.01:42,3,0	./.	./.	./.	1/1:0,15:8:24.08:327,24,0	./.	1/1:0,6:5:15.05:199,15,0	1/1:0,10:8:24.08:319,24,0	./.	1/1:0,7:6:18.06:222,18,0	1/1:0,5:5:15.05:213,15,0	1/1:0,12:12:36.01:466,36,0	./.
chr10	44220926	.	TGA	T	257.27	PASS	AB=0.600;AC=30;AF=0.882;AN=34;BaseQRankSum=-0.965;DP=110;FS=0.000;HRun=0;HaplotypeScore=57.7955;InbreedingCoeff=0.1185;MQ=20.25;MQ0=5;MQRankSum=0.083;QD=2.99;ReadPosRankSum=1.627;VQSLOD=1.5931;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/1:1,2:2:6.09:6,0,32	./.	./.	1/1:2,11:6:8.66:48,9,0	1/1:0,4:3:2.68:11,3,0	./.	./.	1/1:0,8:7:11.19:50,11,0	1/1:0,6:3:2.37:8,2,0	1/1:1,8:2:2.80:13,3,0	1/1:1,5:6:8.34:37,8,0	1/1:0,3:2:2.84:14,3,0	1/1:0,5:5:5.64:26,6,0	1/1:0,7:5:11.14:49,11,0	./.	./.	./.	1/1:0,2:2:1.82:5,2,0	./.	./.	1/1:0,5:2:5.64:26,6,0	1/1:1,4:2:2.84:14,3,0	1/1:0,2:2:2.88:15,3,0	./.	0/1:2,4:3:5.20:5,0,32	0/0:1,2:3:0.47:0,0,1	1/1:0,2:2:5.34:22,5,0
chr10	44221923	.	T	TA	869.13	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=0.301;DP=465;FS=10.740;HRun=1;HaplotypeScore=48.9022;InbreedingCoeff=0.9891;MQ=72.66;MQ0=0;MQRankSum=0.449;QD=29.97;ReadPosRankSum=-0.147;VQSLOD=1.9001;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:52:99:0,138,1752	1/1:0,8:8:18.06:270,18,0	0/0:13,0:12:26.25:0,26,367	0/0:8,0:8:24.03:0,24,269	0/0:24,0:24:66.16:0,66,810	0/0:18,0:18:48.14:0,48,608	0/0:8,0:8:21.07:0,21,272	0/0:15,0:15:45.14:0,45,563	0/0:13,0:13:33.03:0,33,428	0/0:16,0:16:45.13:0,45,560	0/0:19,0:19:54.18:0,54,701	0/0:11,0:11:30.10:0,30,389	0/0:10,0:10:30.10:0,30,389	0/0:17,0:17:51.17:0,51,662	0/0:11,0:11:26.83:0,27,350	0/0:10,0:10:24.06:0,24,312	1/1:2,19:21:48.16:719,48,0	0/0:12,0:12:27.08:0,27,337	0/0:19,0:19:51.17:0,51,662	0/0:21,0:21:60.20:0,60,779	0/0:19,0:19:57.16:0,57,724	0/0:18,0:18:51.17:0,51,662	0/0:26,0:26:72.15:0,72,908	0/0:11,0:11:33.11:0,33,428	0/0:15,0:15:45.15:0,45,584	0/0:18,0:18:51.17:0,51,662	0/0:16,0:16:48.16:0,48,623	0/0:15,0:15:45.15:0,45,584
chr10	44228700	.	AT	A	1171.24	PASS	AB=0.591;AC=9;AF=0.180;AN=50;BaseQRankSum=7.536;DP=680;FS=1.507;HRun=1;HaplotypeScore=66.6184;InbreedingCoeff=0.7850;MQ=35.18;MQ0=103;MQRankSum=-6.001;QD=11.48;ReadPosRankSum=2.949;VQSLOD=2.0600;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:22:54.16:0,54,797	0/0:8,0:7:21.07:0,21,320	./.	./.	0/0:46,0:26:63.16:0,63,892	0/0:41,0:32:84.21:0,84,1175	0/0:19,0:19:27.08:0,27,409	0/0:33,0:19:57.18:0,57,849	0/0:26,0:21:54.18:0,54,824	1/1:6,23:20:60.20:830,60,0	0/1:8,18:16:33.38:113,0,33	0/0:21,0:16:36.12:0,36,548	0/0:21,0:9:24.08:0,24,365	0/0:17,0:6:15.03:0,15,205	1/1:3,11:10:9.03:125,9,0	1/1:3,11:10:15.05:209,15,0	0/0:44,0:32:66.15:0,66,970	./.	0/0:22,0:12:33.10:0,33,482	0/0:41,0:28:72.24:0,72,1094	0/0:14,0:10:21.07:0,21,319	0/0:27,0:23:60.14:0,60,844	0/0:39,0:30:78.23:0,78,1143	0/0:22,0:14:30.10:0,30,456	1/1:6,13:10:3.01:42,3,0	0/0:26,0:18:54.16:0,54,786	0/0:39,0:30:78.24:0,78,1160	0/0:32,0:19:33.01:0,33,431
chr10	44230713	.	G	GA	4181.85	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-9.920;DP=641;FS=1.896;HRun=1;HaplotypeScore=49.8694;InbreedingCoeff=0.9108;MQ=52.38;MQ0=21;MQRankSum=2.888;QD=34.28;ReadPosRankSum=1.015;VQSLOD=3.3730;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:48:99:0,123,1580	0/0:8,0:8:18.06:0,18,233	0/0:23,1:6:17.89:0,18,208	0/0:24,0:1:3.01:0,3,39	0/0:39,0:38:90.29:0,90,1167	0/0:14,0:14:30.10:0,30,387	0/0:19,0:19:54.10:0,54,698	0/0:25,0:11:27.09:0,27,351	0/0:19,0:18:39.13:0,39,506	1/1:2,28:30:84.19:1172,84,0	1/1:0,20:20:42.14:628,42,0	0/0:14,0:14:33.08:0,33,428	0/0:15,0:15:27.09:0,27,348	0/0:9,0:9:18.06:0,18,234	1/1:1,24:25:57.19:854,57,0	1/1:0,12:12:27.09:405,27,0	0/0:30,0:30:81.25:0,81,1036	1/1:0,20:19:42.14:629,42,0	0/0:22,0:16:44.65:0,45,572	0/0:31,0:31:87.24:0,87,1106	0/0:42,0:42:99:0,114,1443	0/0:27,0:27:66.21:0,66,844	0/0:24,0:24:57.18:0,57,736	0/0:22,0:22:63.20:0,63,814	1/1:0,15:15:33.11:494,33,0	0/0:28,2:30:0.33:0,0,986	0/0:24,0:24:54.18:0,54,700	0/0:7,0:7:18.06:0,18,234
chr10	44233358	.	AAG	A	173.73	PASS	AB=0.750;AC=1;AF=0.018;AN=56;BaseQRankSum=0.965;DP=588;FS=20.098;HRun=0;HaplotypeScore=80.1566;InbreedingCoeff=-0.0253;MQ=56.10;MQ0=14;MQRankSum=-4.489;QD=5.26;ReadPosRankSum=-0.585;VQSLOD=1.1804;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:72.22:0,72,1233	0/0:10,0:10:30.10:0,30,532	0/0:16,0:6:15.05:0,15,266	0/0:11,0:1:3.01:0,3,53	0/0:36,0:36:93.23:0,93,1568	0/0:24,0:24:66.21:0,66,1119	0/0:11,0:11:33.10:0,33,551	0/1:22,11:29:99:248,0,867	0/0:24,0:24:63.22:0,63,1112	0/0:28,0:28:75.24:0,75,1288	0/0:34,0:34:93.32:0,93,1631	0/0:17,0:17:51.17:0,51,904	0/0:15,0:15:42.14:0,42,745	0/0:16,0:16:45.13:0,45,741	0/0:17,0:17:51.16:0,51,841	0/0:12,0:12:33.11:0,33,585	0/0:20,0:20:57.18:0,57,960	0/0:15,0:14:36.12:0,36,638	0/0:27,0:23:66.22:0,66,1141	0/0:28,0:24:66.16:0,66,1103	0/0:13,0:13:36.09:0,36,580	0/0:24,0:24:66.20:0,66,1115	0/0:38,0:37:99:0,102,1764	0/0:7,0:7:18.06:0,18,319	0/0:25,0:23:66.23:0,66,1151	0/0:23,0:22:57.20:0,57,994	0/0:27,0:27:72.22:0,72,1246	0/0:12,0:11:33.11:0,33,579
chr10	44234565	.	C	CGT	2374.76	PASS	AB=0.881;AC=26;AF=0.500;AN=52;BaseQRankSum=-2.849;DP=696;FS=2.576;HRun=0;HaplotypeScore=122.5885;InbreedingCoeff=0.3321;MQ=61.42;MQ0=20;MQRankSum=-2.332;QD=6.42;ReadPosRankSum=-0.264;VQSLOD=3.4756;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:36:44.74:0,45,442	0/0:4,0:6:5.68:0,6,28	./.	./.	0/0:18,0:17:14.87:0,15,146	0/0:12,0:24:20.36:0,20,98	0/1:13,0:22:6.81:7,0,62	0/0:26,0:34:7.58:0,8,42	0/0:17,0:31:34.09:0,34,168	1/1:18,0:20:15.49:168,15,0	1/1:17,0:20:15:130,15,0	0/1:12,7:22:28.14:301,0,28	0/1:11,9:20:35.34:204,0,35	1/1:9,6:15:17.93:269,18,0	1/1:19,0:27:21:183,21,0	1/1:11,1:25:29.03:241,29,0	0/0:22,0:37:30.92:0,31,154	1/1:10,0:13:5.98:47,6,0	0/1:22,0:21:20.15:20,0,68	0/1:23,1:21:20.90:21,0,207	0/1:48,1:53:36.14:36,0,356	1/1:9,7:17:12.04:179,12,0	1/1:8,5:14:8.45:128,8,0	1/1:11,13:23:30.10:449,30,0	0/1:15,5:21:99:155,0,104	0/0:26,0:27:23.39:0,23,243	0/0:18,0:24:29.54:0,30,271	0/1:8,1:9:23.89:24,0,177
chr10	44236990	.	GCCA	G	4048.43	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=13.626;DP=628;FS=1.928;HRun=0;HaplotypeScore=118.2089;InbreedingCoeff=0.9860;MQ=80.87;MQ0=0;MQRankSum=-13.806;QD=42.62;ReadPosRankSum=1.598;VQSLOD=5.1612;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:84.29:0,84,2067	0/0:7,0:7:21.07:0,21,517	0/0:35,0:29:84.29:0,84,1998	0/0:34,0:33:95.73:0,96,1952	0/0:30,0:30:90.31:0,90,2208	0/0:25,0:25:75.26:0,75,1843	0/0:12,0:12:36.12:0,36,888	0/0:27,0:27:81.28:0,81,1975	0/0:24,0:24:72.25:0,72,1775	1/1:2,22:25:75.25:1228,75,0	1/1:1,26:26:54.17:849,54,0	0/0:19,0:19:57.20:0,57,1405	0/0:18,0:18:54.15:0,54,1226	0/0:26,0:26:78.27:0,78,1892	1/1:0,14:15:42.14:670,42,0	1/1:1,10:11:33.10:528,33,0	0/0:19,0:19:57.20:0,57,1400	1/1:0,3:3:8.98:126,9,0	0/0:24,0:24:72.25:0,72,1709	0/0:24,0:24:72.25:0,72,1773	0/0:49,0:49:99:0,144,3452	0/0:13,0:13:36.12:0,36,851	0/0:26,0:26:78.27:0,78,1847	0/0:19,0:19:57.20:0,57,1405	1/1:0,13:13:39.13:648,39,0	0/0:23,1:24:20.17:0,20,1649	0/0:28,0:28:84.29:0,84,2029	0/0:21,0:21:53.69:0,54,1329
chr10	44236995	.	ATGTCAC	A	5577.49	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=14.373;DP=626;FS=4.690;HRun=0;HaplotypeScore=150.9571;InbreedingCoeff=0.9481;MQ=79.91;MQ0=0;MQRankSum=-13.927;QD=62.67;ReadPosRankSum=2.728;VQSLOD=4.9949;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:84.29:0,84,3077	0/0:7,0:7:21.07:0,21,736	0/0:37,0:31:90.26:0,90,2665	0/0:29,0:28:84.28:0,84,2770	0/0:30,0:30:87.30:0,87,3184	0/0:25,0:25:75.26:0,75,2741	0/0:13,0:13:39.13:0,39,1429	0/0:27,0:27:81.28:0,81,2812	0/0:25,0:25:75.26:0,75,2772	1/1:1,22:23:69.24:1637,69,0	1/1:0,26:25:51.18:1181,51,0	0/0:19,0:19:57.20:0,57,1984	0/0:17,0:17:51.18:0,51,1836	0/0:26,0:26:78.27:0,78,2888	1/1:0,14:14:42.14:939,42,0	1/1:0,10:10:30.10:713,30,0	0/0:21,0:21:63.22:0,63,2274	1/1:0,3:3:9.03:189,9,0	0/0:22,0:22:66.22:0,66,2101	0/0:27,0:27:81.19:0,81,2774	0/0:50,0:50:99:0,144,5308	0/0:14,0:14:36.12:0,36,1289	0/0:26,0:26:75.26:0,75,2791	0/0:20,0:20:60.21:0,60,2221	1/1:0,13:13:39.13:920,39,0	0/0:24,1:25:2.18:0,2,2560	0/0:27,0:27:81.26:0,81,2855	0/0:22,0:22:56.91:0,57,2016
chr10	44238025	.	CTTCAGAGACTTTTGTCA	C	6893.96	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=11.155;DP=517;FS=5.323;HRun=0;HaplotypeScore=241.7424;InbreedingCoeff=0.9860;MQ=57.70;MQ0=9;MQRankSum=-9.765;QD=85.11;ReadPosRankSum=3.186;VQSLOD=4.2764;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:81.26:0,81,5959	0/0:16,0:16:45.15:0,45,3429	0/0:23,0:16:45.15:0,45,3090	0/0:14,0:8:24.08:0,24,1527	0/0:23,0:23:60.21:0,60,4351	0/0:25,0:25:69.21:0,69,4809	0/0:14,0:14:39.13:0,39,2974	0/0:10,0:9:24.08:0,24,1593	0/0:25,0:25:57.20:0,57,4171	1/1:5,15:18:45.15:1939,45,0	1/1:3,10:11:12.04:581,12,0	0/0:12,0:12:33.11:0,33,2680	0/0:21,0:21:63.22:0,63,4490	0/0:15,0:15:36.12:0,36,2561	1/1:5,10:15:27.09:1308,27,0	1/1:0,11:11:33.11:1597,33,0	0/0:25,0:25:72.25:0,72,5115	1/1:5,7:10:17.95:743,18,0	0/0:22,0:19:57.15:0,57,3838	0/0:29,0:29:78.25:0,78,5383	0/0:18,0:18:54.19:0,54,4119	0/0:21,0:21:57.20:0,57,4190	0/0:20,0:20:57.20:0,57,4140	0/0:13,0:13:39.13:0,39,3069	1/1:1,9:9:15.05:725,15,0	0/0:27,0:27:75.26:0,75,5231	0/0:27,0:26:78.27:0,78,5152	0/0:6,0:6:18.06:0,18,1471
chr10	44238970	.	C	CGTGATTG	2920.95	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-3.095;DP=684;FS=24.033;HRun=0;HaplotypeScore=129.0102;InbreedingCoeff=0.9115;MQ=47.41;MQ0=52;MQRankSum=-6.847;QD=67.93;ReadPosRankSum=-3.258;VQSLOD=1.6690;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:48:87.24:0,87,2115	1/1:3,5:8:21.07:816,21,0	0/0:17,0:4:6.02:0,6,101	0/0:22,0:6:6.02:0,6,149	0/0:31,0:31:69.24:0,69,1722	0/0:25,0:25:57.18:0,57,1372	0/0:22,0:21:63.19:0,63,1454	1/1:16,7:24:54.13:1662,54,0	0/0:34,0:33:74.95:0,75,1649	0/0:31,0:30:72.25:0,72,1787	0/0:15,0:15:24.08:0,24,599	0/0:25,0:24:39.09:0,39,889	0/0:23,0:23:47.95:0,48,1134	0/0:14,0:14:33.11:0,33,802	0/0:29,0:28:57.18:0,57,1258	0/0:25,0:25:54.18:0,54,1301	1/1:4,5:8:15.05:582,15,0	0/0:24,0:18:27.51:0,28,581	0/0:33,0:26:75.24:0,75,1746	0/0:31,0:30:87.25:0,87,2027	0/0:31,0:26:64.26:0,64,1495	0/0:29,0:29:57.20:0,57,1423	0/0:25,0:25:59.79:0,60,1497	0/0:23,0:20:39.09:0,39,916	0/0:17,0:16:36.12:0,36,873	0/0:23,0:19:51.17:0,51,1225	0/0:30,0:28:65.83:0,66,1531	0/0:11,0:9:12.04:0,12,300
chr10	44240569	.	GA	G	3593.49	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-0.991;DP=397;FS=1.322;HRun=9;HaplotypeScore=51.7211;InbreedingCoeff=0.9567;MQ=70.31;MQ0=1;MQRankSum=-0.051;QD=24.45;ReadPosRankSum=2.939;VQSLOD=4.4100;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,22:23:63.03:576,63,0	0/0:10,0:10:27.05:0,27,299	0/0:15,0:10:29.98:0,30,292	0/0:17,0:13:17.59:0,18,181	1/1:2,24:26:72.03:658,72,0	0/0:19,0:19:48.10:0,48,539	0/0:5,0:5:8.98:0,9,89	0/0:24,0:24:66.17:0,66,742	0/0:7,0:7:18.05:0,18,208	0/0:1,0:21:53.77:0,54,269	0/0:7,0:24:50.66:0,51,284	0/0:4,0:4:6.02:0,6,69	0/0:10,0:10:30.09:0,30,345	0/0:7,0:7:18.01:0,18,193	0/0:1,0:8:22.89:0,23,136	0/0:0,0:9:22.62:0,23,115	0/0:18,0:18:54.16:0,54,623	0/0:0,0:16:42.61:0,43,216	1/1:1,26:27:78.04:711,78,0	1/1:1,16:17:48.03:439,48,0	1/1:2,7:9:21.01:192,21,0	0/0:5,0:5:15.04:0,15,173	0/0:9,0:9:15.04:0,15,173	0/0:6,0:6:12.04:0,12,139	0/0:0,0:16:39.77:0,40,202	1/1:2,11:13:33.02:302,33,0	1/1:2,16:18:42.02:384,42,0	1/1:0,14:14:36.02:329,36,0
chr10	44241070	.	G	GA	6067.51	PASS	AB=0.723;AC=34;AF=0.607;AN=56;BaseQRankSum=-8.711;DP=475;FS=1.806;HRun=10;HaplotypeScore=50.7772;InbreedingCoeff=0.8363;MQ=67.50;MQ0=2;MQRankSum=0.229;QD=19.57;ReadPosRankSum=0.765;VQSLOD=5.5338;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,20:24:26.49:487,26,0	0/1:1,7:8:3.59:171,0,4	0/0:20,0:14:26.67:0,27,174	0/0:14,0:9:15.74:0,16,125	1/1:5,16:22:9.16:326,9,0	0/0:18,0:18:50.91:0,51,412	0/0:8,0:8:20.95:0,21,168	1/1:9,20:29:40.86:588,41,0	0/0:15,0:16:37.99:0,38,301	0/0:24,0:24:56.89:0,57,465	0/1:18,2:21:7.76:8,0,341	1/1:4,10:16:35.99:358,36,0	1/1:2,5:7:15.04:160,15,0	1/1:3,10:13:24.06:256,24,0	0/0:19,0:19:47.93:0,48,391	0/0:11,0:12:16.99:0,17,129	1/1:2,14:16:39.10:415,39,0	0/0:9,0:8:13.63:0,14,103	1/1:3,12:15:11.42:317,11,0	1/1:1,24:27:62.10:661,62,0	1/1:1,7:8:18.05:192,18,0	1/1:1,14:15:33.08:352,33,0	1/1:1,14:16:38.93:398,39,0	1/1:1,8:9:24.06:256,24,0	0/0:21,0:21:56.91:0,57,464	1/1:8,19:28:10:542,10,0	1/1:5,15:22:33.93:319,34,0	1/1:2,11:13:5.43:263,5,0
chr10	44252247	.	ATGT	A	510.61	PASS	AB=0.556;AC=13;AF=0.310;AN=42;BaseQRankSum=6.121;DP=331;FS=12.784;HRun=0;HaplotypeScore=45.1896;InbreedingCoeff=0.7400;MQ=69.73;MQ0=5;MQRankSum=-3.826;QD=11.10;ReadPosRankSum=-3.897;VQSLOD=0.7015;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/0:19,0:19:54.19:0,54,1177	0/0:11,0:9:27.09:0,27,559	0/0:14,0:13:27.06:0,27,484	./.	0/0:24,0:24:69.23:0,69,1465	0/0:12,0:12:33.10:0,33,682	0/0:25,0:25:69.24:0,69,1506	0/0:12,0:12:33.11:0,33,719	1/1:5,5:4:6.02:95,6,0	1/1:2,2:4:3.01:48,3,0	0/0:16,0:16:45.11:0,45,938	0/0:18,0:18:51.18:0,51,1113	0/0:20,0:20:57.19:0,57,1207	1/1:0,5:1:3.01:48,3,0	./.	0/0:12,0:12:36.12:0,36,781	./.	0/1:1,4:2:41.53:42,0,60	./.	./.	0/0:23,0:23:60.20:0,60,1270	0/0:31,0:31:90.30:0,90,1918	0/0:11,0:11:27.09:0,27,589	./.	1/1:2,6:4:9.03:143,9,0	1/1:3,7:4:9.03:143,9,0	1/1:0,4:3:9.03:143,9,0
chr10	44257571	.	T	TA	4174.06	PASS	AB=0.917;AC=27;AF=0.482;AN=56;BaseQRankSum=5.883;DP=394;FS=3.743;HRun=10;HaplotypeScore=61.9270;InbreedingCoeff=0.8630;MQ=45.80;MQ0=9;MQRankSum=-2.530;QD=20.26;ReadPosRankSum=0.706;VQSLOD=4.7135;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:27,1:29:58.28:633,58,0	0/0:12,0:10:11.91:0,12,98	0/0:8,0:5:11.95:0,12,95	0/0:5,0:1:0.89:0,1,2	1/1:14,4:17:32.70:295,33,0	0/0:13,0:12:32.95:0,33,268	0/0:8,0:8:17.97:0,18,148	0/0:20,0:16:38.91:0,39,312	0/0:13,0:12:32.92:0,33,265	1/1:8,5:13:36.01:340,36,0	1/1:11,1:13:21.41:254,21,0	0/0:16,0:15:38.95:0,39,320	0/0:11,0:11:26.85:0,27,212	0/0:9,0:9:17.97:0,18,147	1/1:11,0:9:24:228,24,0	1/1:13,2:14:39.04:369,39,0	0/0:15,1:16:35.96:0,36,296	1/1:9,4:12:29.92:286,30,0	0/1:10,1:9:15.77:108,0,16	1/1:25,5:28:4.39:414,4,0	1/1:12,2:14:12.02:285,12,0	0/0:19,0:18:34.97:0,35,276	0/0:16,0:15:35.96:0,36,296	0/0:21,0:20:41.93:0,42,344	1/1:9,2:11:30.07:310,30,0	1/1:8,1:8:24.04:237,24,0	1/1:12,3:13:33.02:319,33,0	1/1:4,0:3:9.02:96,9,0
chr10	44257583	.	TA	T	4299.83	PASS	AB=0.684;AC=33;AF=0.589;AN=56;BaseQRankSum=7.605;DP=400;FS=2.131;HRun=10;HaplotypeScore=61.6407;InbreedingCoeff=0.8362;MQ=51.50;MQ0=3;MQRankSum=-1.838;QD=17.00;ReadPosRankSum=1.238;VQSLOD=5.3601;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:26,2:28:49.07:517,49,0	1/1:1,7:8:18:156,18,0	0/0:12,0:9:1.69:0,2,136	0/0:7,0:2:5.98:0,6,53	1/1:14,6:20:38.82:335,39,0	0/0:14,0:13:36.10:0,36,398	0/0:9,0:9:24.06:0,24,265	1/1:5,13:17:10.10:307,10,0	0/0:13,0:14:35.87:0,36,357	1/1:11,6:17:50.81:416,51,0	1/1:11,3:14:23.94:200,24,0	0/0:16,0:15:42.11:0,42,464	0/0:13,0:13:30.08:0,30,332	0/0:8,0:8:15.04:0,15,165	1/1:9,1:9:17.92:140,18,0	1/1:12,3:15:41.79:319,42,0	1/1:4,14:18:2.81:253,3,0	1/1:8,4:13:18.90:182,19,0	0/1:7,6:12:6.21:179,0,6	1/1:17,4:21:8.92:280,9,0	1/1:16,3:18:38.96:337,39,0	0/0:17,0:18:44.95:0,45,474	0/0:16,1:17:19.03:0,19,425	0/0:19,0:19:45.10:0,45,488	1/1:9,1:10:23.56:199,24,0	1/1:7,3:10:26.95:225,27,0	1/1:14,1:14:13.50:176,14,0	1/1:3,0:3:9:78,9,0
chr10	44257708	.	C	CGTGT	5239.95	PASS	AB=0.792;AC=39;AF=0.848;AN=46;BaseQRankSum=-1.860;DP=530;FS=4.005;HRun=0;HaplotypeScore=87.1917;InbreedingCoeff=0.2732;MQ=48.77;MQ0=26;MQRankSum=1.174;QD=14.09;ReadPosRankSum=2.113;VQSLOD=3.8785;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:28:9.03:152,9,0	1/1:5,0:6:2.80:13,3,0	0/0:44,0:9:2.96:0,3,19	./.	./.	0/1:10,6:19:71.27:287,0,71	1/1:11,11:25:26.17:545,26,0	1/1:30,0:28:38.96:434,39,0	1/1:7,9:19:26.69:507,27,0	1/1:9,0:8:5.95:42,6,0	0/1:3,0:2:0:0,0,0	1/1:10,6:18:20.33:382,20,0	1/1:5,10:19:20.54:382,21,0	1/1:6,5:13:9.03:195,9,0	1/1:10,0:22:2.97:52,3,0	1/1:15,0:15:15.03:233,15,0	0/1:12,0:22:8.49:54,0,8	1/1:10,0:9:2.98:22,3,0	1/1:21,0:16:13.23:165,13,0	./.	0/0:38,0:32:1.08:0,1,3	1/1:3,8:11:18.06:428,18,0	1/1:8,7:16:8.84:214,9,0	1/1:11,16:29:32.85:728,33,0	./.	1/1:15,0:13:23.83:228,24,0	1/1:19,0:18:20.84:178,21,0	./.
chr10	44257969	.	T	TAGG	742.48	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-5.755;DP=670;FS=7.720;HRun=0;HaplotypeScore=98.0597;InbreedingCoeff=0.9680;MQ=72.03;MQ0=0;MQRankSum=-1.055;QD=26.52;ReadPosRankSum=-3.609;VQSLOD=2.5069;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,135,2008	0/0:11,0:11:30.10:0,30,429	0/0:22,0:23:42.11:0,42,573	0/0:25,0:25:41.09:0,41,586	0/0:27,0:27:69.23:0,69,1028	0/0:24,0:24:63.21:0,63,942	0/0:28,0:28:71.79:0,72,1023	1/1:13,15:27:42.14:837,42,0	0/0:21,0:21:51.17:0,51,763	0/0:31,0:31:72.24:0,72,1074	0/0:14,0:14:33.08:0,33,469	0/0:18,0:18:48.14:0,48,678	0/0:24,0:24:63.18:0,63,901	0/0:20,0:20:42.13:0,42,607	0/0:32,0:32:81.27:0,81,1209	0/0:22,0:22:63.21:0,63,939	0/0:30,0:30:69.17:0,69,966	0/0:12,0:12:27.01:0,27,354	0/0:19,0:19:48.16:0,48,712	0/0:26,0:26:63.21:0,63,920	0/0:28,0:28:63.21:0,63,936	0/0:23,0:23:51.17:0,51,762	0/0:26,0:26:63.21:0,63,941	0/0:29,0:29:75.25:0,75,1121	0/0:11,0:11:30.09:0,30,429	0/0:25,0:25:51.16:0,51,744	0/0:37,0:36:87.29:0,87,1300	0/0:4,0:4:12.04:0,12,179
chr10	44260955	.	G	GT	1396.07	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=-7.500;DP=519;FS=2.123;HRun=5;HaplotypeScore=52.2069;InbreedingCoeff=0.8618;MQ=63.56;MQ0=4;MQRankSum=0.253;QD=19.12;ReadPosRankSum=-2.274;VQSLOD=2.7143;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:27:78.16:0,78,826	1/1:0,13:13:36.12:474,36,0	0/0:17,0:15:34.63:0,35,365	0/0:12,0:11:30.08:0,30,322	0/0:18,0:18:51.13:0,51,548	0/0:25,0:25:63.16:0,63,677	0/0:6,0:5:12.03:0,12,129	1/1:2,18:11:30.10:392,30,0	0/0:23,0:23:66.16:0,66,708	0/0:28,0:28:72.65:0,73,774	0/0:23,0:23:63.16:0,63,677	0/0:19,0:19:54.14:0,54,580	0/0:11,0:11:33.08:0,33,355	0/0:19,0:19:51.13:0,51,548	0/0:22,0:22:54.10:0,54,563	0/0:18,0:18:51.10:0,51,533	1/1:3,20:23:51.17:671,51,0	0/1:16,0:15:5.12:5,0,315	0/0:14,0:12:33.08:0,33,355	0/0:23,0:23:60.15:0,60,644	0/0:23,0:23:60.15:0,60,644	0/0:15,0:15:42.10:0,42,451	0/0:20,0:20:51.13:0,51,547	0/0:11,0:11:30.07:0,30,322	0/0:13,0:13:39.10:0,39,419	0/0:17,0:17:42.10:0,42,451	0/0:28,0:28:84.20:0,84,894	0/0:13,0:13:39.10:0,39,419
chr10	44261396	.	T	TATA	995.06	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-3.234;DP=607;FS=8.889;HRun=0;HaplotypeScore=90.8914;InbreedingCoeff=0.9970;MQ=64.52;MQ0=1;MQRankSum=0.871;QD=39.80;ReadPosRankSum=0.761;VQSLOD=4.1155;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:78.22:0,78,1285	1/1:0,12:13:27.09:639,27,0	0/0:27,0:22:60.21:0,60,1049	0/0:32,0:31:90.28:0,90,1463	0/0:27,0:27:81.28:0,81,1414	0/0:27,0:27:72.22:0,72,1223	0/0:15,0:15:42.14:0,42,740	0/0:25,0:25:71.94:0,72,1194	0/0:21,0:21:63.22:0,63,1106	0/0:27,0:27:78.26:0,78,1350	0/0:33,0:33:99:0,99,1747	0/0:14,0:14:42.14:0,42,735	0/0:14,0:14:42.14:0,42,730	0/0:17,0:17:51.17:0,51,900	0/0:16,0:16:45.15:0,45,793	0/0:21,0:21:63.22:0,63,1111	1/1:2,10:12:21.07:477,21,0	0/0:24,0:24:66.20:0,66,1133	0/0:19,0:18:51.17:0,51,900	0/0:36,0:36:99:0,105,1806	0/0:17,0:17:51.17:0,51,900	0/0:24,0:24:69.19:0,69,1217	0/0:28,0:28:78.27:0,78,1346	0/0:15,0:15:37.94:0,38,655	0/0:21,0:21:60.19:0,60,1031	0/0:19,0:19:57.19:0,57,987	0/0:23,0:23:66.20:0,66,1134	0/0:10,0:10:30.10:0,30,529
chr10	44261837	.	ATG	A	19930.29	PASS	AB=0.540;AC=44;AF=0.786;AN=56;BaseQRankSum=8.070;DP=628;FS=7.738;HRun=0;HaplotypeScore=98.4226;InbreedingCoeff=0.7988;MQ=61.57;MQ0=4;MQRankSum=-3.268;QD=37.25;ReadPosRankSum=2.901;VQSLOD=7.1707;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:4,24:28:31.02:784,0,31	1/1:1,12:13:33.11:465,33,0	0/0:13,0:13:17.64:0,18,575	0/0:10,0:10:27.09:0,27,468	1/1:2,34:35:96.32:1370,96,0	0/0:24,0:24:72.25:0,72,1320	0/0:18,0:18:51.17:0,51,935	1/1:1,26:25:72.22:995,72,0	0/0:27,0:27:75.26:0,75,1360	1/1:1,33:34:96.31:1357,96,0	1/1:0,26:26:78.26:1118,78,0	1/1:0,22:22:51.17:725,51,0	1/1:0,28:27:69.23:989,69,0	1/1:1,24:25:69.23:989,69,0	1/1:0,17:17:39.13:559,39,0	1/1:4,21:25:8.20:805,8,0	0/1:3,17:18:4.26:556,0,4	1/1:2,10:12:30.10:426,30,0	1/1:0,19:19:57.17:797,57,0	1/1:2,46:48:99:1935,135,0	1/1:0,19:19:57.19:817,57,0	1/1:0,15:15:39.13:558,39,0	1/1:0,15:15:39.12:559,39,0	1/1:0,13:13:36.12:516,36,0	1/1:3,26:29:69.23:989,69,0	1/1:0,30:30:90.30:1289,90,0	1/1:1,21:22:57.19:817,57,0	1/1:0,12:12:36.12:516,36,0
chr10	44262144	.	GTT	G	7103.81	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=10.486;DP=601;FS=18.390;HRun=8;HaplotypeScore=80.7624;InbreedingCoeff=0.9954;MQ=63.94;MQ0=3;MQRankSum=0.696;QD=30.23;ReadPosRankSum=4.981;VQSLOD=3.4417;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:30:69.14:0,69,1142	0/0:8,0:8:21.07:0,21,355	0/0:25,1:24:65.61:0,66,942	0/0:12,0:11:27.09:0,27,441	0/0:33,0:33:90.31:0,90,1522	0/0:24,0:24:72.25:0,72,1206	0/0:18,0:18:51.17:0,51,860	0/0:9,0:39:80.59:0,81,329	0/0:21,0:21:60.21:0,60,1010	1/1:0,32:32:96.29:1160,96,0	1/1:3,19:22:48.14:585,48,0	1/1:1,9:10:24.07:292,24,0	1/1:2,22:24:63.19:758,63,0	1/1:2,18:20:34.25:602,34,0	1/1:0,18:17:48.15:586,48,0	1/1:1,14:15:39.12:476,39,0	0/0:20,0:22:47.85:0,48,857	1/1:1,13:15:32.83:375,33,0	0/0:17,0:16:42.14:0,42,686	0/0:37,0:37:99:0,105,1764	0/0:8,0:8:15.05:0,15,250	1/1:1,27:28:75.23:915,75,0	1/1:4,21:24:63.19:768,63,0	1/1:5,9:14:21.06:256,21,0	1/1:1,11:12:27.08:329,27,0	0/0:22,1:23:32.62:0,33,1046	0/0:38,0:38:99:0,105,1765	0/0:10,0:10:21.07:0,21,355
chr10	44262509	.	AT	A	721	PASS	AB=0.947;AC=5;AF=0.089;AN=56;BaseQRankSum=2.018;DP=542;FS=16.965;HRun=9;HaplotypeScore=100.9876;InbreedingCoeff=0.8189;MQ=61.27;MQ0=0;MQRankSum=-0.248;QD=12.22;ReadPosRankSum=0.782;VQSLOD=1.6401;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:66.11:0,66,735	1/1:0,15:15:39.02:357,39,0	0/1:17,1:12:4.60:5,0,181	0/0:10,0:10:24.07:0,24,268	0/0:21,2:22:35.72:0,36,665	0/0:31,0:31:87.24:0,87,987	0/0:13,0:13:36.11:0,36,416	0/0:23,0:23:48.10:0,48,539	0/0:18,0:18:51.15:0,51,589	0/0:35,0:35:87.24:0,87,994	0/0:24,0:24:66.20:0,66,762	0/0:14,0:14:39.06:0,39,434	0/0:22,1:23:38.68:0,39,674	0/0:20,0:20:54.16:0,54,621	0/0:20,0:20:60.16:0,60,674	0/0:7,0:7:21.06:0,21,242	1/1:3,23:26:46.59:484,47,0	0/0:23,0:23:60.07:0,60,676	0/0:13,0:13:36.10:0,36,407	0/0:28,0:28:78.20:0,78,886	0/0:10,0:10:24.07:0,24,277	0/0:14,0:15:44.95:0,45,486	0/0:25,0:25:66.20:0,66,762	0/0:10,0:10:24.07:0,24,277	0/0:15,0:15:42.12:0,42,476	0/0:26,0:26:75.22:0,75,863	0/0:27,0:27:75.20:0,75,847	0/0:7,0:7:15.04:0,15,173
chr10	44264985	.	AT	A	3218.01	PASS	AC=28;AF=0.519;AN=54;BaseQRankSum=8.415;DP=475;FS=5.634;HRun=9;HaplotypeScore=63.5698;InbreedingCoeff=0.9328;MQ=59.28;MQ0=8;MQRankSum=-0.924;QD=14.69;ReadPosRankSum=3.152;VQSLOD=3.7856;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:44:99:0,120,1330	1/1:3,3:6:14.98:128,15,0	0/0:14,0:7:2.20:0,2,97	0/0:9,0:4:6.02:0,6,70	0/0:25,0:25:57.62:0,58,636	0/0:10,0:10:21.04:0,21,224	0/0:17,0:17:45.07:0,45,484	./.	0/0:19,0:19:41.79:0,42,398	1/1:16,4:19:40.59:350,41,0	1/1:10,2:12:23.87:192,24,0	1/1:3,12:15:17.99:163,18,0	1/1:0,14:14:21.01:191,21,0	1/1:2,13:14:7.43:103,7,0	1/1:14,2:16:42.23:283,42,0	1/1:18,1:18:31.10:220,31,0	1/1:13,2:14:26.23:226,26,0	1/1:21,3:24:22.53:368,23,0	0/0:23,0:22:57.09:0,57,623	0/0:20,0:20:47.97:0,48,529	0/0:15,0:15:27.06:0,27,293	1/1:1,4:5:12:108,12,0	1/1:1,11:12:23.72:219,24,0	1/1:12,13:23:30.51:450,31,0	1/1:19,2:21:54.73:437,55,0	0/0:28,0:28:24.97:0,25,696	0/0:20,0:20:51.12:0,51,560	0/0:9,0:8:15.03:0,15,162
chr10	44264993	.	T	TC	346.48	PASS	AB=0.974;AC=9;AF=0.167;AN=54;BaseQRankSum=7.019;DP=482;FS=10.450;HRun=0;HaplotypeScore=75.6067;InbreedingCoeff=0.0029;MQ=58.30;MQ0=9;MQRankSum=0.966;QD=2.67;ReadPosRankSum=0.556;VQSLOD=1.8208;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:45:99:0,132,1720	0/1:5,1:6:14.18:39,0,14	0/0:12,0:5:11.07:0,11,123	0/0:11,0:4:5.75:0,6,84	0/0:25,0:25:69.13:0,69,871	0/0:11,0:11:24.04:0,24,307	0/0:18,0:18:48.09:0,48,603	./.	0/0:17,0:17:50.41:0,50,559	0/1:22,1:22:64.56:70,0,65	0/0:15,0:15:2.19:0,2,98	0/0:14,0:14:19.31:0,19,96	0/0:15,0:15:17.95:0,18,88	0/0:17,0:16:20.22:0,20,116	0/1:18,0:18:15.30:54,0,15	0/1:18,0:17:22.15:22,0,47	1/1:14,2:15:7.34:150,7,0	0/1:23,0:23:31.94:78,0,32	0/0:24,0:22:66.13:0,66,845	0/0:20,0:20:54.08:0,54,692	0/0:12,0:12:33.04:0,33,402	0/1:5,0:5:23.50:27,0,24	0/0:14,0:14:4.44:0,4,129	0/0:26,0:24:18.16:0,18,209	0/1:21,0:21:22.24:45,0,22	0/0:26,0:26:50.81:0,51,918	0/0:19,0:19:54.14:0,54,694	0/0:8,0:7:18.03:0,18,215
chr10	44264994	.	TC	T	1416.49	PASS	AB=0.981;AC=26;AF=0.481;AN=54;BaseQRankSum=13.458;DP=482;FS=8.315;HRun=1;HaplotypeScore=69.2367;InbreedingCoeff=0.7830;MQ=58.21;MQ0=9;MQRankSum=-2.627;QD=6.08;ReadPosRankSum=1.006;VQSLOD=0.1403;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:45:99:0,110,1100	1/1:6,0:6:12.11:60,12,0	0/0:12,0:5:6.44:0,6,60	0/0:12,0:4:5.89:0,6,55	0/0:25,0:25:49.98:0,50,549	0/0:11,0:11:19.78:0,20,161	0/0:17,0:17:40.94:0,41,332	./.	0/0:16,0:16:8.85:0,9,247	0/1:23,0:22:1.52:103,0,2	1/1:16,0:16:32.67:157,33,0	1/1:14,1:15:1.95:57,2,0	1/1:15,0:15:17.82:78,18,0	1/1:16,1:16:16.61:83,17,0	1/1:18,0:18:38.92:163,39,0	1/1:18,0:17:31.42:124,31,0	1/1:15,0:14:27.49:145,27,0	1/1:23,0:23:47:199,47,0	0/0:24,0:22:25.28:0,25,423	0/0:20,0:20:51.64:0,52,419	0/0:11,0:11:17.36:0,17,167	1/1:5,0:5:4.16:25,4,0	1/1:13,1:14:15.66:85,16,0	0/1:25,1:24:21.60:144,0,22	1/1:22,0:22:26.68:200,27,0	0/0:26,0:26:57.69:0,58,573	0/0:19,0:19:42.64:0,43,474	0/0:8,0:7:17.78:0,18,173
chr10	44265135	.	C	CATTAACTATGTAAT	24986.26	PASS	AB=0.769;AC=29;AF=0.537;AN=54;BaseQRankSum=-7.412;DP=389;FS=6.094;HRun=0;HaplotypeScore=120.2484;InbreedingCoeff=0.8817;MQ=64.66;MQ0=2;MQRankSum=-14.217;QD=109.59;ReadPosRankSum=1.825;VQSLOD=4.7107;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:60.18:0,60,2155	1/1:1,2:6:9.03:553,9,0	0/0:5,0:5:14.92:0,15,501	0/0:9,0:9:20.83:0,21,653	0/0:22,0:22:63.22:0,63,2599	0/0:14,0:14:36.10:0,36,1285	0/0:6,0:6:18.05:0,18,633	./.	0/0:13,0:13:36.12:0,36,1491	1/1:7,15:30:72.23:4147,72,0	1/1:8,12:24:45.15:2876,45,0	1/1:4,5:10:27.09:1599,27,0	1/1:4,5:17:21:1204,21,0	1/1:4,5:10:21.07:1313,21,0	1/1:3,9:20:33.10:2161,33,0	1/1:3,9:13:33.11:2073,33,0	1/1:2,3:10:8.95:439,9,0	1/1:5,1:6:14.98:368,15,0	0/0:24,0:24:69.24:0,69,2711	0/0:22,0:22:66.18:0,66,2368	0/0:8,0:8:21.07:0,21,780	1/1:2,4:11:15.05:974,15,0	1/1:3,8:17:30.02:1829,30,0	1/1:0,3:8:9.03:633,9,0	1/1:10,16:31:75.19:4422,75,0	0/1:7,2:10:99:396,0,819	0/0:15,0:15:42.14:0,42,1684	0/0:3,0:3:9.03:0,9,384
chr10	44269796	.	TA	T	4568.34	PASS	AB=0.900;AC=13;AF=0.241;AN=54;BaseQRankSum=12.736;DP=578;FS=0.367;HRun=4;HaplotypeScore=55.1041;InbreedingCoeff=0.9035;MQ=73.28;MQ0=0;MQRankSum=-1.665;QD=30.05;ReadPosRankSum=-0.183;VQSLOD=4.5247;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,2:19:51.17:0,51,714	0/1:8,1:9:11.97:12,0,233	0/0:19,0:19:51.13:0,51,625	0/0:12,0:12:33.05:0,33,418	0/0:34,0:34:99:0,102,1400	0/0:31,1:32:93.30:0,93,1281	0/0:15,0:15:39.11:0,39,525	./.	0/0:23,0:23:63.20:0,63,865	1/1:1,27:28:81.22:957,81,0	1/1:2,20:22:57.17:684,57,0	0/0:12,0:12:36.12:0,36,498	0/0:26,0:26:75.22:0,75,1009	0/0:19,0:19:57.19:0,57,795	1/1:1,12:13:33.10:396,33,0	1/1:1,15:16:39.12:468,39,0	0/0:22,0:22:63.18:0,63,855	1/1:1,24:25:57.17:683,57,0	0/0:25,0:25:69.20:0,69,914	0/0:32,0:32:93.31:0,93,1293	0/0:22,0:22:60.17:0,60,819	0/0:16,0:16:42.13:0,42,571	0/0:35,0:35:99:0,102,1419	0/0:7,0:7:21.07:0,21,294	1/1:0,39:39:99:1368,114,0	0/0:16,0:16:48.16:0,48,666	0/0:25,0:25:75.25:0,75,1050	0/0:11,0:11:33.11:0,33,462
chr10	44270424	.	T	TTTCC	177.13	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.359;DP=573;FS=0.000;HRun=0;HaplotypeScore=100.9271;InbreedingCoeff=0.9230;MQ=84.39;MQ0=0;MQRankSum=-3.406;QD=22.14;ReadPosRankSum=-1.003;VQSLOD=2.7983;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:81.26:0,81,1642	0/0:6,0:6:18.06:0,18,378	0/0:29,0:29:78.25:0,78,1545	0/0:23,0:23:60.10:0,60,1136	0/0:37,0:37:99:0,111,2258	0/0:22,0:22:66.23:0,66,1379	0/0:13,0:13:39.13:0,39,818	1/1:0,8:5:9.03:260,9,0	0/0:26,0:26:78.27:0,78,1636	0/0:27,0:27:78.27:0,78,1611	0/0:17,0:17:48.15:0,48,941	0/0:18,0:18:54.16:0,54,1056	0/0:25,0:25:75.23:0,75,1531	0/0:15,0:15:45.15:0,45,944	0/0:20,0:20:60.18:0,60,1182	0/0:13,0:13:36.11:0,36,717	0/0:12,0:12:33.11:0,33,682	0/0:25,0:25:59.23:0,59,1293	0/0:19,0:19:57.20:0,57,1194	0/0:22,0:22:66.23:0,66,1380	0/0:24,0:24:69.24:0,69,1447	0/0:21,0:21:63.20:0,63,1278	0/0:18,0:18:54.19:0,54,1132	0/0:15,0:15:45.15:0,45,939	0/0:18,0:18:54.19:0,54,1127	0/0:25,0:25:75.26:0,75,1573	0/0:42,0:42:99:0,120,2508	0/0:6,0:6:18.06:0,18,378
chr10	44271603	.	CGTGT	C	2943.77	PASS	AB=0.716;AC=11;AF=0.204;AN=54;BaseQRankSum=-0.115;DP=678;FS=11.218;HRun=0;HaplotypeScore=133.9314;InbreedingCoeff=0.5433;MQ=43.91;MQ0=78;MQRankSum=-0.440;QD=18.87;ReadPosRankSum=2.017;VQSLOD=3.0322;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:30:20.98:0,21,396	0/0:6,0:10:12.04:0,12,209	0/0:69,0:8:21.54:0,22,404	0/0:57,0:9:23.97:0,24,482	0/0:16,0:15:2.51:0,3,64	0/0:23,0:23:60.21:0,60,1412	0/1:21,1:22:3.59:4,0,875	./.	0/0:35,0:36:43.72:0,44,1791	1/1:4,16:20:45.12:663,45,0	1/1:6,15:22:33.57:505,34,0	0/0:5,0:20:24.08:0,24,421	0/0:5,0:16:36.12:0,36,601	0/0:9,0:22:33.10:0,33,549	1/1:9,18:28:38.96:579,39,0	0/1:4,11:18:39.89:358,0,40	0/0:28,0:20:3.38:0,3,164	0/1:9,11:21:22.73:385,0,23	0/0:13,0:10:8.99:0,9,125	0/0:23,0:21:7.13:0,7,127	0/0:42,0:33:12.74:0,13,196	0/0:4,0:18:20.16:0,20,292	0/0:6,0:14:11.83:0,12,214	0/0:15,0:36:32.14:0,32,504	1/1:7,16:24:39.13:613,39,0	0/0:19,0:19:25.33:0,25,423	0/0:9,0:9:3.44:0,3,21	0/0:8,0:8:6.02:0,6,122
chr10	44272261	.	GA	G	6719.38	PASS	AB=1.000;AC=29;AF=0.537;AN=54;BaseQRankSum=-7.370;DP=571;FS=1.461;HRun=9;HaplotypeScore=72.6336;InbreedingCoeff=0.9263;MQ=68.30;MQ0=0;MQRankSum=-0.164;QD=21.89;ReadPosRankSum=4.052;VQSLOD=5.6375;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:63.13:0,63,712	1/1:0,6:6:18.01:165,18,0	0/1:17,0:17:13.24:13,0,386	0/0:19,0:19:27.08:0,27,307	0/0:34,0:34:82.48:0,82,929	0/0:21,0:21:54.15:0,54,615	0/0:11,0:12:32.93:0,33,361	./.	0/0:13,0:13:30.09:0,30,344	1/1:2,30:31:90.05:824,90,0	1/1:5,22:27:63.03:577,63,0	1/1:4,15:19:45.02:412,45,0	1/1:6,13:19:39.01:357,39,0	1/1:2,17:19:45.02:412,45,0	1/1:2,22:25:65.07:583,65,0	1/1:1,16:17:45.02:412,45,0	1/1:3,21:24:60.03:549,60,0	1/1:1,14:15:42.02:384,42,0	0/0:20,0:20:45.13:0,45,519	0/0:27,0:27:69.20:0,69,788	0/0:13,0:14:41.96:0,42,465	1/1:0,25:25:72.04:659,72,0	1/1:3,28:31:75.03:686,75,0	1/1:1,13:14:33.01:302,33,0	1/1:1,16:17:42.02:384,42,0	0/0:33,1:34:65.80:0,66,1003	0/0:35,0:34:96.27:0,96,1098	0/0:10,0:10:18.05:0,18,208
chr10	44273194	.	A	AAC	2622.67	PASS	AB=0.797;AC=36;AF=0.720;AN=50;BaseQRankSum=0.601;DP=617;FS=3.462;HRun=0;HaplotypeScore=119.1506;InbreedingCoeff=0.2063;MQ=56.80;MQ0=16;MQRankSum=-0.240;QD=5.18;ReadPosRankSum=1.653;VQSLOD=3.2182;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:43,0:41:26.56:216,27,0	1/1:5,3:8:9.03:132,9,0	./.	0/1:37,0:18:0:0,0,0	1/1:14,0:13:3:26,3,0	0/0:15,0:15:21.04:0,21,219	0/0:27,0:27:27.74:0,28,269	./.	0/0:15,0:15:17.72:0,18,188	0/1:20,7:27:73.16:176,0,73	0/1:8,3:11:23.40:38,0,23	1/1:15,0:23:2.68:11,3,0	1/1:21,0:20:8.87:78,9,0	1/1:23,0:23:5.85:62,6,0	0/1:18,10:29:99:155,0,107	0/1:13,5:21:44.68:176,0,45	0/1:21,14:37:6.79:494,0,7	0/1:12,13:28:99:431,0,124	1/1:19,0:18:14.97:132,15,0	./.	0/1:25,0:25:0:0,0,0	1/1:21,0:19:9.16:79,9,0	1/1:18,0:17:6:52,6,0	1/1:21,0:36:5.90:42,6,0	1/1:9,8:18:18.06:269,18,0	1/1:17,0:16:9.48:89,9,0	1/1:23,0:21:11.96:104,12,0	1/1:6,0:6:2.46:9,2,0
chr10	44273211	.	A	ACACACACACA	3092.78	PASS	AB=1.000;AC=27;AF=0.563;AN=48;BaseQRankSum=-4.191;DP=675;FS=3.130;HRun=0;HaplotypeScore=183.0969;InbreedingCoeff=0.7132;MQ=50.45;MQ0=28;MQRankSum=-2.722;QD=8.71;ReadPosRankSum=-5.667;VQSLOD=0.4288;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:46,0:44:31:823,31,0	0/0:7,0:7:9.02:0,9,91	./.	./.	1/1:14,0:13:3.01:116,3,0	0/0:14,0:14:20.64:0,21,440	0/0:30,0:27:30.58:0,31,605	./.	0/0:15,0:15:17.36:0,17,424	0/1:32,0:32:71.06:71,0,304	0/0:14,0:14:5.54:0,6,57	1/1:29,0:29:3.01:148,3,0	1/1:20,0:19:9.42:148,9,0	1/1:29,0:29:10.73:205,11,0	0/0:27,0:27:23.13:0,23,402	0/0:22,0:21:18.51:0,19,297	0/0:44,0:44:20.67:0,21,366	0/0:30,0:31:18.79:0,19,754	1/1:23,0:21:20.63:254,21,0	./.	1/1:29,7:35:3:149,3,0	1/1:19,0:16:15.02:254,15,0	1/1:17,0:16:6.02:131,6,0	1/1:34,0:33:5.44:237,5,0	0/0:16,0:16:18.03:0,18,177	1/1:22,0:20:14.64:374,15,0	1/1:26,0:24:15.01:331,15,0	1/1:7,0:7:3.48:34,3,0
chr10	44274416	.	CCTATAATCTGCTGCTCACCACCTTTGACTT	C	2964.13	PASS	AB=0.609;AC=9;AF=0.173;AN=52;BaseQRankSum=8.021;DP=724;FS=12.841;HRun=0;HaplotypeScore=507.5096;InbreedingCoeff=0.8070;MQ=90.47;MQ0=0;MQRankSum=-5.872;QD=24.30;ReadPosRankSum=0.189;VQSLOD=-0.2458;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:58:99:0,138,12150	0/0:12,0:12:30.10:0,30,2576	0/0:26,0:26:36.10:0,36,1422	0/0:36,0:36:61.89:0,62,2302	0/0:27,0:27:60.21:0,60,4916	0/0:18,0:18:36.11:0,36,3395	0/0:19,0:19:33.09:0,33,2263	./.	0/0:23,0:23:33.11:0,33,2692	1/1:12,14:26:24.93:812,25,0	./.	0/0:32,0:32:72.25:0,72,6445	0/0:42,0:42:99:0,102,10138	0/0:23,0:23:45.15:0,45,3972	1/1:8,17:25:6.02:385,6,0	0/1:10,18:28:99:675,0,144	0/0:30,0:30:75.26:0,75,7101	1/1:16,0:16:21.03:761,21,0	0/0:11,0:11:12.04:0,12,1305	0/0:19,0:19:45.15:0,45,4231	0/0:51,0:51:99:0,117,9861	0/0:21,0:21:36.12:0,36,3437	0/0:31,0:31:69.24:0,69,6258	0/0:29,0:29:60.21:0,60,7051	1/1:7,20:27:8.34:483,8,0	0/0:40,0:40:84.28:0,84,7984	0/0:20,0:20:36.12:0,36,3782	0/0:15,0:14:32.71:0,33,3758
chr10	44274446	.	T	TC	398.19	PASS	AB=0.941;AC=6;AF=0.115;AN=52;BaseQRankSum=6.934;DP=668;FS=0.000;HRun=1;HaplotypeScore=82.2005;InbreedingCoeff=0.1913;MQ=94.25;MQ0=0;MQRankSum=-4.452;QD=4.80;ReadPosRankSum=-1.421;VQSLOD=-0.3443;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:65,0:65:99:0,193,2438	0/0:12,0:12:36.12:0,36,466	0/0:30,0:30:90.18:0,90,1116	0/0:31,0:32:82.87:0,83,980	0/0:25,0:25:75.23:0,75,960	0/0:14,0:14:39.13:0,39,506	0/0:14,0:14:42.14:0,42,544	./.	0/0:19,0:19:57.18:0,57,725	0/1:14,0:14:17.40:155,0,17	./.	0/0:33,0:33:99:0,99,1270	0/0:37,0:37:99:0,111,1412	0/0:20,0:20:51.16:0,51,660	1/1:17,0:17:6.02:81,6,0	0/1:19,0:19:28.68:40,0,29	0/0:33,0:33:96.31:0,96,1246	0/1:9,4:13:68.31:213,0,68	0/0:22,0:22:66.21:0,66,845	0/0:31,0:31:90.24:0,90,1112	0/0:47,0:47:99:0,138,1778	0/0:16,0:16:48.16:0,48,623	0/0:31,0:31:90.23:0,90,1134	0/0:25,0:25:72.16:0,72,934	0/1:20,0:20:30.27:31,0,30	0/0:35,0:35:99:0,102,1312	0/0:17,0:17:48.16:0,48,623	0/0:17,0:16:46.58:0,47,559
chr10	44275701	.	AT	A	3905.42	PASS	AC=12;AF=0.222;AN=54;BaseQRankSum=12.831;DP=579;FS=0.751;HRun=8;HaplotypeScore=55.6302;InbreedingCoeff=0.9986;MQ=64.49;MQ0=0;MQRankSum=2.174;QD=25.20;ReadPosRankSum=2.805;VQSLOD=4.4083;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:57.17:0,57,688	0/0:9,0:9:24.06:0,24,278	0/0:15,0:14:30.70:0,31,326	0/0:11,0:10:26.79:0,27,276	0/0:28,0:29:87.13:0,87,1029	0/0:25,0:24:72.22:0,72,870	0/0:13,0:13:30.09:0,30,362	./.	0/0:19,0:19:54.17:0,54,652	1/1:1,25:26:75.11:719,75,0	1/1:2,25:27:60.08:579,60,0	0/0:20,0:20:54.17:0,54,652	0/0:18,0:18:54.15:0,54,640	0/0:18,0:18:45.14:0,45,542	1/1:0,29:29:81.13:782,81,0	1/1:3,20:23:54.08:521,54,0	0/0:13,0:13:36.11:0,36,435	1/1:0,8:8:24.04:232,24,0	0/0:23,0:23:51.16:0,51,615	0/0:36,0:36:96.29:0,96,1158	0/0:20,0:20:57.16:0,57,676	0/0:28,0:28:81.24:0,81,968	0/0:28,0:28:66.20:0,66,797	0/0:15,0:15:39.11:0,39,458	1/1:4,38:42:99:1072,111,0	0/0:19,0:19:51.16:0,51,614	0/0:33,0:33:90.25:0,90,1064	0/0:11,0:11:33.10:0,33,399
chr10	44277883	.	G	GTCTATCTA	2227.86	PASS	AB=1.000;AC=20;AF=0.370;AN=54;BaseQRankSum=4.618;DP=506;FS=0.000;HRun=0;HaplotypeScore=174.1466;InbreedingCoeff=0.1083;MQ=48.68;MQ0=16;MQRankSum=-4.397;QD=6.94;ReadPosRankSum=-5.695;VQSLOD=0.4124;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:38.48:0,38,531	0/1:15,0:14:88.20:88,0,360	0/0:15,0:6:18.04:0,18,302	0/0:12,0:5:15.05:0,15,280	0/0:42,0:38:50.91:0,51,777	0/1:14,0:14:99:226,0,298	0/1:10,0:9:53.60:54,0,187	./.	0/1:22,0:21:85.77:86,0,460	1/1:27,0:25:10.27:654,10,0	1/1:32,0:28:18.91:270,19,0	0/0:15,0:15:23.59:0,24,298	0/0:20,0:20:47.01:0,47,582	0/0:12,0:11:20.68:0,21,217	0/1:12,0:12:39.96:119,0,40	1/1:5,10:20:6.01:224,6,0	0/1:18,0:15:98.12:98,0,187	1/1:12,0:10:3.88:78,4,0	0/1:22,0:17:68.09:68,0,682	0/1:26,0:22:46.21:46,0,735	0/0:2,0:2:3.01:0,3,48	0/0:11,0:11:23.02:0,23,247	0/0:22,0:22:50.43:0,50,591	0/0:4,0:4:8.62:0,9,109	1/1:30,0:27:12.45:103,12,0	0/1:30,0:26:3.03:3,0,777	0/1:31,0:28:99:282,0,774	0/0:10,0:8:2.07:0,2,273
chr10	44277887	.	G	GTCTATCTA	3920.15	PASS	AB=0.783;AC=45;AF=0.938;AN=48;BaseQRankSum=-0.524;DP=517;FS=2.673;HRun=0;HaplotypeScore=169.2928;InbreedingCoeff=0.1231;MQ=49.52;MQ0=10;MQRankSum=-0.212;QD=8.29;ReadPosRankSum=-0.127;VQSLOD=2.8339;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:2.97:0,3,20	1/1:15,0:14:6.02:144,6,0	./.	./.	1/1:42,0:38:5.81:46,6,0	1/1:9,5:19:12.02:388,12,0	1/1:9,0:8:3.01:70,3,0	./.	1/1:23,0:22:14.99:249,15,0	1/1:28,0:26:30.01:668,30,0	1/1:31,0:27:17.98:267,18,0	1/1:6,0:18:5.99:49,6,0	0/1:13,0:18:21.68:82,0,22	1/1:6,0:13:8.99:82,9,0	1/1:12,0:12:6.01:128,6,0	1/1:19,0:19:6.02:224,6,0	1/1:22,0:18:9.03:179,9,0	1/1:13,0:11:7.79:51,8,0	1/1:23,0:18:5.98:78,6,0	1/1:25,0:21:3.01:67,3,0	./.	1/1:5,0:11:11.97:97,12,0	1/1:13,0:23:20.45:155,20,0	1/1:4,0:5:3:27,3,0	1/1:31,0:28:15:175,15,0	1/1:29,0:25:25.09:246,25,0	1/1:33,0:30:18.04:410,18,0	1/1:10,0:8:3.01:38,3,0
chr10	44278315	.	GAA	G	3014.56	PASS	AC=50;AF=1.000;AN=50;BaseQRankSum=1.180;DP=301;FS=0.000;HRun=2;HaplotypeScore=167.5743;InbreedingCoeff=-0.0189;MQ=32.83;MQ0=1;MQRankSum=-1.484;QD=10.15;ReadPosRankSum=-0.939;VQSLOD=-0.0511;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,8:9:16.74:84,17,0	1/1:1,5:6:16.33:71,16,0	./.	./.	1/1:2,23:25:44.49:163,44,0	1/1:2,22:24:63.73:313,64,0	1/1:0,5:5:11.19:52,11,0	./.	1/1:2,9:11:30.69:181,31,0	1/1:1,9:9:5.96:137,6,0	1/1:0,15:13:32.56:121,33,0	1/1:2,7:8:12.41:64,12,0	1/1:0,11:11:29.88:132,30,0	1/1:2,9:10:7.72:58,8,0	1/1:1,11:12:27.32:126,27,0	1/1:0,22:22:48.05:233,48,0	1/1:0,3:3:8.68:47,9,0	1/1:0,3:3:5.89:37,6,0	1/1:0,8:8:23.68:163,24,0	1/1:0,22:20:44.75:182,45,0	1/1:0,7:7:13.76:61,14,0	1/1:2,9:11:20.53:86,21,0	1/1:1,17:18:35.40:132,35,0	1/1:0,9:9:20.39:78,20,0	1/1:1,14:15:24.57:113,25,0	1/1:0,14:13:38.08:241,38,0	1/1:1,11:12:27.66:134,28,0	1/1:0,5:5:14.51:81,15,0
chr10	44278320	.	G	GGT	8340.88	PASS	AC=50;AF=0.962;AN=52;BaseQRankSum=1.315;DP=376;FS=0.000;HRun=0;HaplotypeScore=193.1647;InbreedingCoeff=0.7093;MQ=32.06;MQ0=1;MQRankSum=-1.231;QD=22.42;ReadPosRankSum=0.289;VQSLOD=4.8580;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,8:12:23.95:203,24,0	1/1:0,6:6:17.96:145,18,0	./.	0/0:2,0:1:3.01:0,3,34	1/1:4,23:27:59.58:477,60,0	1/1:4,22:26:74.87:647,75,0	1/1:2,5:7:15:161,15,0	./.	1/1:4,9:13:38.97:415,39,0	1/1:5,9:13:26.02:396,26,0	1/1:4,15:17:47.63:346,48,0	1/1:5,7:11:25.49:180,25,0	1/1:3,10:14:40.20:375,40,0	1/1:3,9:12:22.24:225,22,0	1/1:4,11:15:38.94:378,39,0	1/1:3,22:24:59.98:550,60,0	1/1:4,3:7:18.01:187,18,0	1/1:3,3:6:12.03:137,12,0	1/1:2,8:10:30.07:332,30,0	1/1:4,22:24:56.74:437,57,0	1/1:3,7:10:18:168,18,0	1/1:8,9:17:44.87:489,45,0	1/1:3,17:20:47.71:410,48,0	1/1:8,9:17:38.81:317,39,0	1/1:2,14:16:26.93:225,27,0	1/1:2,14:15:45.08:462,45,0	1/1:8,11:19:50.98:535,51,0	1/1:0,5:5:15.02:141,15,0
chr10	44278516	.	C	CAT	3436.55	PASS	AB=0.569;AC=9;AF=0.167;AN=54;BaseQRankSum=-6.495;DP=532;FS=1.551;HRun=0;HaplotypeScore=92.1142;InbreedingCoeff=0.6072;MQ=57.91;MQ0=6;MQRankSum=-1.126;QD=27.49;ReadPosRankSum=-0.442;VQSLOD=4.1857;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:63.20:0,63,793	0/0:8,0:9:23.91:0,24,279	0/0:11,0:6:0.04:0,0,96	0/0:15,0:11:18.04:0,18,213	0/0:21,0:21:39.12:0,39,492	0/0:28,1:29:51.15:0,51,630	0/0:18,0:17:42.12:0,42,515	./.	0/0:24,0:23:57.15:0,57,691	0/1:2,17:18:21.43:717,0,21	0/1:6,17:24:1.72:512,0,2	0/0:11,0:11:24.08:0,24,303	0/0:15,0:15:36.12:0,36,454	0/0:14,0:14:33.11:0,33,416	1/1:3,21:24:13.37:759,13,0	0/1:5,11:16:48.51:321,0,49	0/0:24,0:24:57.16:0,57,703	1/1:8,18:26:42.14:679,42,0	0/0:14,0:11:26.90:0,27,293	0/0:15,0:15:42.13:0,42,530	0/0:32,0:31:56.19:0,56,859	0/0:25,0:25:42.13:0,42,530	0/0:15,0:15:39.12:0,39,492	0/0:23,0:24:54.17:0,54,682	1/1:2,14:16:27.09:449,27,0	0/0:30,0:30:81.25:0,81,1010	0/0:16,0:17:41.92:0,42,488	0/0:8,0:8:18.06:0,18,227
chr10	44280384	.	GTT	G	1888.86	PASS	AC=12;AF=0.222;AN=54;BaseQRankSum=5.898;DP=531;FS=4.470;HRun=12;HaplotypeScore=70.0232;InbreedingCoeff=0.9796;MQ=58.49;MQ0=7;MQRankSum=-0.334;QD=17.33;ReadPosRankSum=2.414;VQSLOD=2.8984;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:69.23:0,69,1019	0/0:2,0:14:25.43:0,25,99	0/0:14,0:9:24.08:0,24,344	0/0:14,0:6:9.03:0,9,126	0/0:37,1:40:71.13:0,71,1238	0/0:18,0:18:45.10:0,45,626	0/0:19,0:20:50.63:0,51,684	./.	0/0:16,0:15:42.06:0,42,589	1/1:3,18:21:45.01:441,45,0	1/1:2,20:23:51.03:519,51,0	0/0:13,0:13:30.10:0,30,442	0/0:19,0:19:51.17:0,51,760	0/0:14,0:14:39.06:0,39,483	1/1:3,12:15:27.04:275,27,0	1/1:6,15:18:33.05:336,33,0	0/0:6,0:34:60.65:0,61,212	1/1:4,12:16:27.05:275,27,0	0/0:15,0:14:36.11:0,36,517	0/0:29,0:32:90.28:0,90,1279	0/0:10,0:12:27.08:0,27,386	0/0:19,0:21:48.09:0,48,636	0/0:24,0:27:60.08:0,60,799	0/0:10,0:10:24.06:0,24,337	1/1:1,12:13:23.97:230,24,0	0/0:27,0:26:63.15:0,63,834	0/0:25,0:27:72.21:0,72,1016	0/0:6,0:6:12.04:0,12,179
chr10	44282231	.	A	AT	3911.20	PASS	AC=12;AF=0.222;AN=54;BaseQRankSum=-12.993;DP=510;FS=9.194;HRun=6;HaplotypeScore=48.8396;InbreedingCoeff=0.9648;MQ=59.14;MQ0=0;MQRankSum=4.057;QD=32.59;ReadPosRankSum=1.570;VQSLOD=3.7015;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:63.12:0,63,633	0/0:8,0:8:24.05:0,24,244	0/0:14,0:12:28.56:0,29,295	0/0:11,0:8:21.05:0,21,214	0/0:35,0:35:96.21:0,96,979	0/0:21,0:20:60.12:0,60,605	0/0:9,0:9:21.03:0,21,207	./.	0/0:10,0:10:27.06:0,27,274	1/1:3,20:23:60.18:741,60,0	1/1:0,29:29:81.26:1019,81,0	0/0:8,0:8:21.05:0,21,214	0/0:18,0:18:39.09:0,39,397	0/0:18,0:18:42.09:0,42,428	1/1:0,12:12:33.11:415,33,0	1/1:1,17:18:45.14:566,45,0	0/0:40,0:40:99:0,114,1128	1/1:0,9:9:24.08:302,24,0	0/0:18,0:16:48.11:0,48,490	0/0:23,0:23:69.16:0,69,704	0/0:11,0:11:33.07:0,33,337	0/0:17,0:17:48.11:0,48,490	0/0:19,0:19:51.11:0,51,516	0/0:13,0:13:36.06:0,36,359	1/1:2,27:29:69.22:868,69,0	0/0:23,0:23:69.15:0,69,698	0/0:39,0:38:96.19:0,96,971	0/0:11,0:11:3.71:0,4,249
chr10	44291850	.	C	CA	977.92	PASS	AB=0.615;AC=19;AF=0.679;AN=28;BaseQRankSum=-1.708;DP=163;FS=0.000;HRun=9;HaplotypeScore=16.4309;InbreedingCoeff=0.6205;MQ=22.32;MQ0=83;MQRankSum=0.759;QD=12.38;ReadPosRankSum=0.759;VQSLOD=0.9146;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,7:6:6.02:66,6,0	./.	./.	./.	./.	0/0:10,0:9:15:0,15,130	0/0:4,0:1:3:0,3,26	./.	0/0:12,0:8:12:0,12,104	1/1:3,9:3:9.02:99,9,0	./.	1/1:1,2:3:3.01:33,3,0	./.	1/1:0,5:5:6.02:66,6,0	1/1:2,4:6:3.01:32,3,0	1/1:1,11:10:18.05:199,18,0	0/1:3,5:2:0:0,0,0	./.	1/1:2,5:5:15.04:166,15,0	./.	./.	./.	./.	./.	./.	1/1:1,10:8:24.06:264,24,0	1/1:1,6:5:15.04:166,15,0	0/0:0,0:1:2.04:0,2,6
chr10	44292190	.	G	GCAACAA	1427.95	PASS	AB=1.000;AC=10;AF=0.313;AN=32;BaseQRankSum=-3.667;DP=310;FS=0.000;HRun=0;HaplotypeScore=37.5562;InbreedingCoeff=0.5401;MQ=19.72;MQ0=172;MQRankSum=0.343;QD=22.67;ReadPosRankSum=-1.075;VQSLOD=2.5666;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	./.	./.	./.	./.	0/0:19,0:4:2.97:0,3,20	1/1:15,4:14:24:551,24,0	1/1:5,3:5:12.04:360,12,0	0/0:3,0:6:18.06:0,18,251	0/1:3,0:2:0:0,0,0	0/0:5,0:3:6.02:0,6,84	1/1:3,3:4:9.03:265,9,0	0/1:11,0:2:15.98:16,0,54	0/0:2,0:2:3.01:0,3,42	./.	./.	0/0:22,0:8:9.03:0,9,177	./.	./.	0/0:12,0:7:6.02:0,6,84	0/0:4,0:2:3.01:0,3,42	1/1:8,3:8:12.04:361,12,0	0/0:12,0:4:9.03:0,9,157	0/0:14,0:8:9.03:0,9,181	0/0:12,0:7:9:0,9,143
chr10	44293232	.	C	CA	3891.84	PASS	AC=12;AF=0.222;AN=54;BaseQRankSum=-10.575;DP=529;FS=4.154;HRun=7;HaplotypeScore=55.4789;InbreedingCoeff=0.9899;MQ=71.07;MQ0=1;MQRankSum=0.642;QD=30.17;ReadPosRankSum=1.806;VQSLOD=4.1741;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:20:47.97:0,48,444	0/0:4,0:4:12.02:0,12,116	0/0:26,0:23:16.99:0,17,412	0/0:16,0:16:20:0,20,190	0/0:32,0:32:75.11:0,75,724	0/0:18,0:18:41.82:0,42,405	0/0:13,0:13:39.06:0,39,376	./.	0/0:17,0:17:45.06:0,45,428	1/1:1,20:21:60.16:703,60,0	1/1:1,28:29:81.25:978,81,0	0/0:13,0:13:33.05:0,33,319	0/0:13,0:13:33.05:0,33,319	0/0:11,0:11:33.05:0,33,318	1/1:1,16:17:45.14:544,45,0	1/1:1,19:20:51.16:616,51,0	0/0:28,0:27:35.17:0,35,485	1/1:9,23:32:63.19:761,63,0	0/0:17,0:16:42.06:0,42,403	0/0:35,0:35:99:0,99,946	0/0:16,0:16:42.07:0,42,406	0/0:20,0:20:57.07:0,57,543	0/0:24,0:24:69.11:0,69,666	0/0:18,0:18:51:0,51,480	1/1:1,9:10:24.07:290,24,0	0/0:20,0:20:57.09:0,57,550	0/0:24,0:24:63.10:0,63,608	0/0:14,0:14:42.07:0,42,406
chr10	44298319	.	TA	T	7413.49	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=10.407;DP=368;FS=4.174;HRun=1;HaplotypeScore=47.6043;InbreedingCoeff=0.9387;MQ=44.19;MQ0=48;MQRankSum=-2.205;QD=26.67;ReadPosRankSum=3.112;VQSLOD=4.7847;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,17:12:36.12:503,36,0	1/1:0,6:4:12.04:167,12,0	0/0:16,0:10:30.09:0,30,447	0/0:11,0:9:27.09:0,27,431	1/1:1,25:20:57.19:795,57,0	0/0:17,0:17:51.14:0,51,764	0/0:10,0:10:27.06:0,27,384	0/0:16,0:12:36.12:0,36,576	0/0:20,0:20:60.18:0,60,913	1/1:0,16:8:24.08:336,24,0	1/1:0,16:6:12.04:167,12,0	1/1:0,13:10:30.10:419,30,0	1/1:0,11:7:21.07:292,21,0	1/1:0,9:6:15.05:209,15,0	1/1:0,15:11:27.09:377,27,0	1/1:0,10:9:21.07:293,21,0	1/1:1,8:6:18.06:251,18,0	1/1:0,12:8:24.08:335,24,0	1/1:1,9:7:21.07:292,21,0	1/1:0,17:10:27.09:376,27,0	1/1:0,4:4:12.04:168,12,0	1/1:0,8:7:21.07:293,21,0	1/1:0,13:7:18.06:251,18,0	1/1:0,5:4:9.03:126,9,0	1/1:0,21:17:45.15:623,45,0	1/1:0,18:11:33.08:426,33,0	1/1:0,19:15:45.15:629,45,0	1/1:0,3:2:6.02:84,6,0
chr10	44298702	.	A	AG	8174.42	PASS	AC=44;AF=0.880;AN=50;BaseQRankSum=5.711;DP=645;FS=5.079;HRun=0;HaplotypeScore=69.5621;InbreedingCoeff=0.9255;MQ=30.52;MQ0=269;MQRankSum=-0.564;QD=16.41;ReadPosRankSum=0.597;VQSLOD=6.7150;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,32:28:51.10:722,51,0	1/1:6,6:6:15.05:233,15,0	./.	./.	1/1:10,14:11:26.93:335,27,0	0/0:28,0:19:27.03:0,27,326	0/0:26,0:15:38.88:0,39,413	./.	0/0:27,0:18:45.03:0,45,562	1/1:7,16:13:36.09:518,36,0	1/1:4,12:12:21.07:307,21,0	1/1:11,14:11:12.04:187,12,0	1/1:1,16:14:30.10:446,30,0	1/1:3,11:8:18.06:272,18,0	1/1:8,9:9:18.06:271,18,0	1/1:5,10:10:15.05:234,15,0	1/1:8,25:23:38.99:525,39,0	1/1:7,9:7:12.04:187,12,0	1/1:8,9:6:18.06:281,18,0	1/1:5,29:23:45.15:672,45,0	1/1:12,23:17:30.10:449,30,0	1/1:6,22:16:30.03:401,30,0	1/1:7,15:11:15.05:225,15,0	1/1:6,25:22:30.01:411,30,0	1/1:0,11:11:15.05:224,15,0	1/1:7,22:17:51.12:767,51,0	1/1:9,16:13:24.08:366,24,0	1/1:7,6:4:9.03:140,9,0
chr10	44300037	.	T	TA	1918.30	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-6.857;DP=313;FS=0.830;HRun=8;HaplotypeScore=31.6330;InbreedingCoeff=0.9220;MQ=58.24;MQ0=15;MQRankSum=-0.858;QD=24.59;ReadPosRankSum=0.192;VQSLOD=3.5365;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:42:0,42,379	0/0:5,0:5:14.98:0,15,131	0/0:14,0:12:30:0,30,270	0/0:2,0:2:6:0,6,55	0/0:5,0:5:8.99:0,9,82	0/0:8,0:8:18.01:0,18,165	0/0:14,0:12:32.98:0,33,294	1/1:3,13:15:36.11:415,36,0	0/0:19,0:19:51.03:0,51,466	1/1:6,15:18:45.13:520,45,0	1/1:1,2:2:6.02:69,6,0	0/0:14,0:14:42.02:0,42,384	0/0:10,0:8:24.01:0,24,220	0/0:12,0:12:30.01:0,30,274	1/1:1,8:9:24.07:277,24,0	1/1:1,5:6:15:158,15,0	0/0:13,0:13:39:0,39,350	1/1:0,9:10:29.88:325,30,0	0/0:20,0:16:45.02:0,45,412	0/0:12,0:11:33.02:0,33,301	0/0:13,0:13:39.02:0,39,357	0/0:10,0:10:27.01:0,27,247	0/0:9,0:9:23.97:0,24,211	0/0:9,0:8:21.01:0,21,192	1/1:3,10:12:30.09:346,30,0	0/0:19,0:18:51.01:0,51,462	0/0:6,0:6:18.01:0,18,165	0/0:3,0:2:6:0,6,55
chr10	44300165	.	CGTGT	C	1410.42	PASS	AB=0.958;AC=36;AF=0.667;AN=54;BaseQRankSum=4.481;DP=494;FS=1.896;HRun=0;HaplotypeScore=120.4156;InbreedingCoeff=0.5601;MQ=60.84;MQ0=16;MQRankSum=-2.153;QD=4.39;ReadPosRankSum=-0.797;VQSLOD=2.4656;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:22,1:23:6.85:50,7,0	0/1:7,0:7:17.46:17,0,46	0/0:28,0:16:41.21:0,41,456	0/0:39,0:22:32.60:0,33,469	./.	0/0:12,0:12:18.04:0,18,253	0/0:27,0:25:56.66:0,57,846	0/0:29,0:28:69.10:0,69,987	0/0:19,0:19:47.95:0,48,695	1/1:11,0:11:14.30:114,14,0	1/1:4,1:5:4.81:30,5,0	0/1:23,0:23:3.18:43,0,3	1/1:21,0:20:7.45:77,7,0	1/1:18,0:18:20.22:129,20,0	1/1:10,3:12:12.39:187,12,0	1/1:12,0:12:8.79:62,9,0	0/0:16,0:15:9.95:0,10,66	1/1:10,0:10:5.88:58,6,0	1/1:24,0:22:12.01:202,12,0	1/1:8,1:8:10.60:96,11,0	1/1:49,0:47:8.19:82,8,0	1/1:12,0:10:5.21:36,5,0	0/1:9,0:9:0.29:0,0,0	1/1:23,0:20:6.44:49,6,0	1/1:8,2:10:3.01:46,3,0	1/1:22,2:24:21.28:232,21,0	1/1:4,8:12:0.05:42,0,0	0/1:4,1:5:9.84:40,0,10
chr10	44300179	.	CGTGTGTGT	C	849.99	PASS	AB=0.938;AC=17;AF=0.327;AN=52;BaseQRankSum=2.179;DP=505;FS=7.058;HRun=0;HaplotypeScore=149.3326;InbreedingCoeff=0.1686;MQ=52.62;MQ0=22;MQRankSum=-1.320;QD=4.27;ReadPosRankSum=-2.172;VQSLOD=1.8478;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:20.90:0,21,210	0/0:6,0:6:6.02:0,6,160	./.	0/0:31,0:15:0:0,0,0	1/1:4,0:4:3:25,3,0	0/0:12,0:11:3.01:0,3,48	0/0:26,0:23:21.10:0,21,526	0/0:24,0:20:2.68:0,3,38	0/0:22,0:22:31.39:0,31,707	0/1:12,0:13:17.05:22,0,17	0/1:7,0:7:17.95:18,0,40	0/1:22,2:25:2.30:241,0,2	1/1:12,9:21:4.86:128,5,0	1/1:14,5:19:18.04:317,18,0	0/0:18,0:17:20.26:0,20,139	0/0:9,0:13:8.85:0,9,85	0/0:10,0:19:14.97:0,15,208	0/0:8,0:9:6.08:0,6,80	0/1:23,0:22:11.36:11,0,61	0/0:10,0:9:5.75:0,6,58	0/0:47,0:44:5.58:0,6,88	./.	1/1:9,0:9:3:28,3,0	1/1:16,10:23:2.99:75,3,0	0/0:10,0:9:5.68:0,6,37	0/1:21,0:24:64.30:64,0,133	0/1:12,0:12:37.14:37,0,44	0/1:9,0:9:18.25:36,0,18
chr10	44300535	.	CA	C	1120.39	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=8.452;DP=598;FS=1.520;HRun=2;HaplotypeScore=63.2771;InbreedingCoeff=0.9908;MQ=72.94;MQ0=0;MQRankSum=-0.748;QD=37.35;ReadPosRankSum=-2.076;VQSLOD=3.4417;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,123,1937	0/0:6,0:6:18.06:0,18,288	0/0:22,0:22:60.16:0,60,888	0/0:18,0:18:34.35:0,34,694	0/0:20,0:20:57.18:0,57,880	0/0:12,0:12:33.10:0,33,501	0/0:26,0:26:75.26:0,75,1199	1/1:0,30:30:87.29:1215,87,0	0/0:18,0:18:54.17:0,54,840	0/0:23,0:23:66.21:0,66,1015	0/0:30,0:30:87.28:0,87,1355	0/0:14,0:14:42.14:0,42,672	0/0:20,0:20:60.20:0,60,957	0/0:16,0:16:48.16:0,48,765	0/0:26,0:26:75.26:0,75,1199	0/0:15,0:15:45.15:0,45,716	0/0:22,0:22:66.21:0,66,1031	0/0:10,0:10:30.08:0,30,454	0/0:33,0:33:99:0,99,1576	0/0:16,0:16:42.13:0,42,645	0/0:30,0:30:90.23:0,90,1321	0/0:19,0:19:54.18:0,54,863	0/0:13,0:13:36.11:0,36,549	0/0:20,0:20:60.12:0,60,903	0/0:13,0:13:36.12:0,36,576	0/0:32,0:32:96.33:0,96,1528	0/0:30,0:30:90.24:0,90,1363	0/0:21,0:21:60.20:0,60,955
chr10	44301171	.	ATCT	A	897.23	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.442;DP=516;FS=1.795;HRun=0;HaplotypeScore=67.0829;InbreedingCoeff=0.9669;MQ=55.90;MQ0=3;MQRankSum=-6.819;QD=34.51;ReadPosRankSum=-2.910;VQSLOD=3.4205;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:69.19:0,69,1476	0/0:7,0:7:21.07:0,21,464	0/0:15,0:11:30.10:0,30,629	0/0:15,0:7:21.06:0,21,400	0/0:27,0:27:75.26:0,75,1635	0/0:24,0:24:72.25:0,72,1588	0/0:18,0:18:51.14:0,51,1061	1/1:1,25:22:63.21:992,63,0	0/0:14,0:14:42.14:0,42,925	0/0:23,0:23:66.23:0,66,1457	0/0:29,0:29:84.29:0,84,1833	0/0:15,0:15:45.15:0,45,994	0/0:6,0:6:15.04:0,15,290	0/0:10,0:10:30.09:0,30,621	0/0:9,0:9:27.09:0,27,577	0/0:17,0:17:48.16:0,48,1056	0/0:23,0:23:63.19:0,63,1347	0/0:18,0:18:48.12:0,48,989	0/0:19,0:17:45.15:0,45,975	0/0:29,0:29:84.28:0,84,1810	0/0:12,0:12:36.12:0,36,795	0/0:22,0:22:63.22:0,63,1372	0/0:23,0:23:69.24:0,69,1500	0/0:8,0:8:21.07:0,21,464	0/0:17,0:17:45.15:0,45,994	0/0:27,0:27:75.26:0,75,1652	0/0:31,0:31:78.23:0,78,1649	0/0:8,0:8:21.07:0,21,464
chr10	44301707	.	G	GATTT	1990.32	PASS	AB=0.862;AC=19;AF=0.339;AN=56;BaseQRankSum=10.586;DP=718;FS=26.743;HRun=0;HaplotypeScore=121.2382;InbreedingCoeff=-0.5037;MQ=60.82;MQ0=1;MQRankSum=-8.775;QD=4.31;ReadPosRankSum=-3.548;VQSLOD=-0.1182;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:19,3:22:99:133,0,851	0/0:14,0:14:39.13:0,39,728	0/1:14,2:12:99:126,0,454	0/1:19,5:18:37.21:37,0,594	0/0:30,2:32:11.94:0,12,1439	0/1:32,4:34:58.96:59,0,1590	0/0:21,0:21:60.20:0,60,1076	0/1:26,7:28:99:321,0,980	0/1:25,6:29:99:177,0,892	0/1:25,6:29:99:107,0,1204	0/0:42,0:39:42.80:0,43,1696	0/1:16,7:22:99:149,0,719	0/1:21,3:24:73.42:73,0,994	0/1:22,3:25:93.93:94,0,1001	0/1:13,7:19:37.06:37,0,647	0/1:13,5:18:99:113,0,683	0/1:26,6:31:99:271,0,1141	0/1:11,2:13:43.14:43,0,527	0/1:19,4:23:99:224,0,772	0/0:32,0:32:84.29:0,84,1562	0/1:12,4:15:16.90:17,0,603	0/1:26,0:26:4.09:4,0,1269	0/0:34,2:35:96.30:0,96,1723	0/1:16,0:16:39.24:39,0,496	0/0:27,0:27:78.27:0,78,1449	0/1:31,2:32:99:126,0,1240	0/0:37,1:37:99:0,108,1925	0/0:13,1:14:36.12:0,36,672
chr10	44302219	.	TC	T	1099.89	PASS	AB=0.836;AC=10;AF=0.179;AN=56;BaseQRankSum=9.522;DP=673;FS=3.239;HRun=1;HaplotypeScore=75.1604;InbreedingCoeff=-0.2123;MQ=60.16;MQ0=4;MQRankSum=-10.732;QD=4.09;ReadPosRankSum=0.691;VQSLOD=0.4163;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:72.22:0,72,1096	0/1:8,4:11:92.26:92,0,342	0/1:33,3:28:38.32:38,0,1039	0/1:23,8:25:99:138,0,732	0/0:34,2:35:63.56:0,64,1505	0/0:30,0:30:90.31:0,90,1408	0/1:11,10:21:99:353,0,453	0/1:37,10:46:99:316,0,1233	0/0:19,0:19:57.18:0,57,865	0/0:30,2:32:32.46:0,32,1249	0/1:30,4:34:64.80:65,0,1238	0/0:16,0:16:48.15:0,48,729	0/0:22,0:22:66.21:0,66,1008	0/0:21,0:21:63.20:0,63,962	0/0:20,0:20:60.15:0,60,850	0/0:11,0:11:33.11:0,33,515	0/0:17,0:17:45.15:0,45,703	0/1:11,1:12:5.71:6,0,466	0/1:21,6:26:99:129,0,865	0/0:33,3:34:57.55:0,58,1420	0/0:14,0:14:42.13:0,42,635	0/1:21,2:23:14.30:14,0,916	0/1:21,5:26:91.98:92,0,907	0/0:16,0:16:48.15:0,48,726	0/0:18,1:18:12.40:0,12,734	0/0:26,1:27:39.50:0,39,1157	0/0:32,0:31:96.29:0,96,1453	0/0:11,0:11:33.03:0,33,484
chr10	44303126	.	TC	T	295.14	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.775;DP=654;FS=2.780;HRun=1;HaplotypeScore=73.5441;InbreedingCoeff=0.9589;MQ=57.22;MQ0=16;MQRankSum=-4.236;QD=13.42;ReadPosRankSum=-2.040;VQSLOD=2.0735;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:90.24:0,90,1407	0/0:9,0:9:27.09:0,27,432	0/0:14,0:4:11.71:0,12,147	0/0:16,0:7:18.04:0,18,247	0/0:39,0:39:99:0,108,1645	0/0:28,0:28:81.25:0,81,1245	0/0:14,0:14:42.14:0,42,671	1/1:4,18:13:30.10:390,30,0	0/0:19,0:19:57.19:0,57,911	0/0:31,0:31:93.32:0,93,1485	0/0:21,0:21:60.20:0,60,953	0/0:15,0:15:45.12:0,45,672	0/0:21,0:21:63.21:0,63,1007	0/0:22,0:22:66.23:0,66,1055	0/0:15,0:15:45.15:0,45,717	0/0:18,0:18:54.18:0,54,860	0/0:27,0:27:81.26:0,81,1270	0/0:20,0:20:54.18:0,54,860	0/0:27,0:18:51.15:0,51,787	0/0:48,0:48:99:0,144,2251	0/0:37,0:37:99:0,111,1748	0/0:15,0:15:45.14:0,45,696	0/0:27,0:27:81.24:0,81,1267	0/0:18,0:18:51.17:0,51,813	0/0:28,0:28:84.29:0,84,1340	0/0:28,0:28:84.29:0,84,1343	0/0:32,0:31:96.33:0,96,1530	0/0:12,0:11:33.11:0,33,527
chr10	44303829	.	A	ATTCT	454.33	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=2.687;DP=574;FS=0.000;HRun=0;HaplotypeScore=91.8305;InbreedingCoeff=0.6591;MQ=61.95;MQ0=1;MQRankSum=-4.857;QD=14.66;ReadPosRankSum=-4.152;VQSLOD=2.1648;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:71.70:0,72,1194	0/0:10,0:10:24.08:0,24,420	0/0:21,0:14:36.12:0,36,590	0/0:17,0:11:30.10:0,30,506	0/0:32,0:32:87.25:0,87,1427	0/0:28,0:28:72.15:0,72,1166	0/0:11,0:11:27.08:0,27,445	1/1:9,14:20:36.81:546,37,0	0/0:18,0:18:42.14:0,42,736	0/0:18,0:18:45.10:0,45,765	0/0:27,0:27:75.26:0,75,1314	0/0:15,0:15:42.14:0,42,736	0/0:16,0:16:45.11:0,45,699	0/0:16,0:16:45.11:0,45,705	0/0:21,0:21:54.16:0,54,886	0/0:14,0:14:33.11:0,33,574	0/0:26,0:26:57.04:0,57,895	0/0:33,0:33:61.82:0,62,1127	0/0:16,0:16:48.15:0,48,810	0/0:25,0:25:60.19:0,60,1018	0/0:19,0:19:51.16:0,51,865	0/0:24,0:24:69.24:0,69,1209	0/0:17,0:17:45.14:0,45,760	0/0:20,0:20:54.19:0,54,946	0/0:15,0:15:33.10:0,33,551	0/0:20,0:20:54.14:0,54,841	0/0:27,0:27:75.23:0,75,1253	0/1:8,0:8:12.35:12,0,47
chr10	44304342	.	AT	A	3547.11	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=9.706;DP=447;FS=1.339;HRun=6;HaplotypeScore=48.0451;InbreedingCoeff=0.9823;MQ=61.68;MQ0=0;MQRankSum=2.318;QD=28.15;ReadPosRankSum=0.830;VQSLOD=3.9710;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:51.17:0,51,671	0/0:8,0:8:24.08:0,24,316	0/0:15,0:12:33.03:0,33,395	0/0:9,0:9:14.54:0,15,220	0/0:39,0:39:99:0,114,1468	0/0:22,0:21:66.20:0,66,854	0/0:6,0:6:18.06:0,18,237	1/1:1,19:17:48.12:516,48,0	0/0:9,0:9:27.09:0,27,355	1/1:0,27:27:78.16:821,78,0	1/1:2,26:28:75.18:804,75,0	0/0:9,0:9:24.08:0,24,316	0/0:15,0:15:45.14:0,45,583	0/0:4,0:4:12.03:0,12,144	1/1:0,9:9:27.07:290,27,0	1/1:1,7:8:21.05:226,21,0	0/0:23,0:23:63.19:0,63,814	1/1:3,16:19:45.07:471,45,0	0/0:19,0:19:54.17:0,54,697	0/0:20,0:20:60.18:0,60,771	0/0:9,0:9:24.06:0,24,300	0/0:12,0:12:33.10:0,33,422	0/0:17,0:17:45.15:0,45,592	0/0:10,0:10:23.87:0,24,289	1/1:1,14:15:39.10:419,39,0	0/0:14,1:16:12.89:0,13,512	0/0:26,0:26:72.22:0,72,929	0/0:10,0:10:30.10:0,30,395
chr10	44304390	.	AT	A	355.05	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.543;DP=453;FS=3.181;HRun=7;HaplotypeScore=57.6003;InbreedingCoeff=0.8192;MQ=65.76;MQ0=3;MQRankSum=-4.620;QD=16.14;ReadPosRankSum=-3.703;VQSLOD=2.8954;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:54.17:0,54,679	0/0:17,0:17:45.12:0,45,550	0/0:14,0:10:7.22:0,7,158	0/0:15,0:11:9.06:0,9,201	0/0:42,0:42:99:0,114,1430	0/0:24,0:24:69.22:0,69,866	0/0:6,0:6:12.04:0,12,151	1/1:5,17:20:48.29:450,48,0	0/0:9,0:9:27.07:0,27,325	0/0:28,0:28:84.23:0,84,1020	0/0:29,0:29:69.17:0,69,849	0/0:12,0:12:33.11:0,33,415	0/0:20,0:20:48.15:0,48,604	0/0:5,0:5:15.05:0,15,189	0/0:9,0:9:27.09:0,27,340	0/0:13,0:13:36.12:0,36,453	0/0:15,0:15:42.13:0,42,522	0/0:11,0:11:24.08:0,24,298	0/0:22,0:20:51.10:0,51,610	0/0:17,0:17:48.15:0,48,600	0/0:5,0:5:15.05:0,15,189	0/0:8,0:8:24.08:0,24,302	0/0:14,0:14:33.10:0,33,411	0/0:9,0:9:21.05:0,21,250	0/0:16,0:16:42.13:0,42,528	0/0:24,0:24:63.20:0,63,791	0/0:16,0:16:45.12:0,45,550	0/0:9,0:9:21.07:0,21,263
chr10	44304402	.	T	TTTA	1025.23	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.585;DP=442;FS=21.520;HRun=0;HaplotypeScore=66.9118;InbreedingCoeff=0.8977;MQ=61.87;MQ0=14;MQRankSum=-7.006;QD=37.97;ReadPosRankSum=-4.231;VQSLOD=1.5671;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:57.19:0,57,939	0/0:18,0:18:51.17:0,51,845	0/0:15,0:6:14.27:0,14,195	0/0:15,0:6:11.95:0,12,148	0/0:40,0:40:99:0,114,1808	0/0:20,0:20:57.19:0,57,944	0/0:4,0:4:12.04:0,12,199	1/1:6,19:25:47.20:1120,47,0	0/0:9,0:9:27.09:0,27,445	0/0:29,0:29:84.29:0,84,1375	0/0:26,0:26:69.22:0,69,1093	0/0:10,0:10:30.10:0,30,497	0/0:19,0:19:54.18:0,54,866	0/0:5,0:5:15.05:0,15,249	0/0:9,0:9:27.09:0,27,447	0/0:13,0:13:36.12:0,36,575	0/0:13,0:13:36.11:0,36,566	0/0:11,0:11:27.04:0,27,385	0/0:20,0:16:45.15:0,45,711	0/0:19,0:19:57.18:0,57,897	0/0:7,0:7:21.07:0,21,348	0/0:8,0:8:24.08:0,24,392	0/0:11,0:10:27.09:0,27,447	0/0:9,0:9:24.07:0,24,373	0/0:19,0:18:51.17:0,51,843	0/0:21,0:21:57.19:0,57,943	0/0:17,0:17:48.16:0,48,795	0/0:7,0:7:21.07:0,21,328
chr10	44305073	.	C	CT	1600.63	PASS	AB=0.935;AC=45;AF=0.804;AN=56;BaseQRankSum=-1.399;DP=300;FS=39.967;HRun=14;HaplotypeScore=56.8718;InbreedingCoeff=0.2272;MQ=62.27;MQ0=12;MQRankSum=-1.007;QD=6.38;ReadPosRankSum=2.588;VQSLOD=-0.2974;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,1:11:6.27:34,6,0	1/1:6,0:5:8.10:34,8,0	0/0:26,0:10:13.92:0,14,72	0/0:16,0:5:10.41:0,10,59	1/1:15,0:15:12.78:161,13,0	0/1:6,1:6:17.45:17,0,30	0/0:7,0:6:5.91:0,6,37	1/1:10,0:8:5.54:28,6,0	0/1:11,0:11:15.45:15,0,33	1/1:19,0:19:28.12:151,28,0	1/1:7,0:4:5.87:39,6,0	1/1:5,0:5:2.92:17,3,0	1/1:14,0:13:22.78:141,23,0	0/1:5,0:4:10.55:26,0,11	1/1:16,0:14:4.49:37,4,0	1/1:12,1:12:13.72:136,14,0	1/1:4,0:8:5.68:28,6,0	1/1:6,2:8:8.89:64,9,0	0/1:7,1:8:16.72:27,0,17	1/1:11,1:11:6.69:110,7,0	1/1:5,0:5:8.65:47,9,0	1/1:7,0:7:5.65:33,6,0	0/1:9,1:10:15.18:77,0,15	1/1:13,0:13:21.23:100,21,0	1/1:10,0:9:14.59:91,15,0	1/1:10,1:11:20.51:143,21,0	1/1:11,2:12:10.60:187,11,0	1/1:5,0:5:2.84:14,3,0
chr10	44305074	.	T	TTC	2181.77	PASS	AB=1.000;AC=43;AF=0.768;AN=56;BaseQRankSum=-4.504;DP=314;FS=14.820;HRun=0;HaplotypeScore=62.2483;InbreedingCoeff=0.5564;MQ=60.87;MQ0=15;MQRankSum=1.388;QD=8.80;ReadPosRankSum=1.860;VQSLOD=2.0067;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:12,0:11:1.85:26,0,2	1/1:3,4:6:8.99:143,9,0	0/0:26,0:10:17.85:0,18,189	0/0:16,0:5:11.95:0,12,110	1/1:17,0:17:10.14:210,10,0	0/0:7,0:6:8.90:0,9,106	0/0:7,0:6:6.02:0,6,87	1/1:10,0:8:17.64:124,18,0	0/0:10,0:10:20.91:0,21,214	1/1:18,0:18:18.13:187,18,0	1/1:9,0:6:7.82:84,8,0	1/1:5,0:5:8.86:59,9,0	1/1:14,0:13:10.70:60,11,0	1/1:5,0:4:2.77:33,3,0	0/1:16,0:13:16.21:16,0,16	1/1:12,0:11:16.52:112,17,0	1/1:12,0:11:14.91:125,15,0	1/1:8,0:8:4.66:81,5,0	1/1:8,0:7:4.62:83,5,0	1/1:12,1:12:17.12:148,17,0	1/1:4,0:4:11.74:74,12,0	1/1:7,0:7:12.87:107,13,0	0/1:10,0:10:4.29:76,0,4	1/1:13,0:13:18.46:125,18,0	1/1:13,0:12:6.73:98,7,0	1/1:15,0:15:20.92:173,21,0	1/1:14,0:13:15.54:138,16,0	1/1:6,0:5:8.96:68,9,0
chr10	44305075	.	T	TC	3981.28	PASS	AB=0.864;AC=44;AF=0.786;AN=56;BaseQRankSum=-5.777;DP=318;FS=14.543;HRun=0;HaplotypeScore=52.7191;InbreedingCoeff=0.5569;MQ=60.47;MQ0=15;MQRankSum=2.235;QD=15.67;ReadPosRankSum=4.337;VQSLOD=4.6265;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,8:11:3.72:71,4,0	0/1:7,0:6:7.62:43,0,8	0/0:25,0:10:18.01:0,18,182	0/0:16,0:5:11.83:0,12,110	1/1:9,9:18:3.41:314,3,0	0/0:6,0:5:6.49:0,6,83	0/0:7,0:6:6.02:0,6,79	1/1:2,8:8:17.99:168,18,0	0/0:10,0:10:21.45:0,21,203	1/1:5,12:17:15.46:399,15,0	1/1:5,4:6:7.64:116,8,0	1/1:4,1:5:8.96:81,9,0	1/1:11,4:14:26.67:233,27,0	1/1:4,1:4:8.55:81,9,0	0/1:10,5:13:47.74:48,0,64	1/1:2,10:11:11.38:233,11,0	1/1:12,0:11:13.63:81,14,0	1/1:6,2:8:1.20:122,1,0	1/1:6,1:6:10.36:113,10,0	1/1:10,6:15:26.34:279,26,0	1/1:2,3:5:11.66:137,12,0	1/1:6,1:7:17.94:150,18,0	1/1:9,1:10:14.51:213,15,0	1/1:10,4:14:23.93:249,24,0	1/1:6,7:12:4.30:188,4,0	1/1:6,10:16:29.57:305,30,0	1/1:7,7:13:10.46:271,10,0	1/1:3,3:5:9:86,9,0
chr10	44305088	.	C	CT	1177.78	PASS	AB=0.790;AC=27;AF=0.540;AN=50;BaseQRankSum=-1.163;DP=304;FS=3.976;HRun=14;HaplotypeScore=48.0296;InbreedingCoeff=0.6270;MQ=58.04;MQ0=26;MQRankSum=-4.285;QD=6.13;ReadPosRankSum=-1.522;VQSLOD=1.6172;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:11,4:11:10.84:95,11,0	0/0:9,0:8:20.90:0,21,161	0/1:23,0:9:0:0,0,0	./.	1/1:5,12:17:1.61:188,2,0	0/0:7,0:6:8.94:0,9,66	0/0:9,0:7:2.97:0,3,22	./.	0/0:8,0:8:11.65:0,12,75	1/1:15,0:17:19.93:84,20,0	1/1:1,0:7:11.01:56,11,0	./.	0/0:15,0:14:21.55:0,22,89	0/0:4,0:4:6.91:0,7,26	1/1:14,0:11:11.19:37,11,0	1/1:5,0:9:17.58:80,18,0	0/0:8,0:7:14.71:0,15,94	1/1:5,0:6:7.24:33,7,0	0/1:4,2:4:11.21:74,0,11	0/1:7,11:17:5.30:120,0,5	1/1:2,1:3:3.01:30,3,0	0/0:4,0:4:5.27:0,5,24	0/0:11,0:12:18.28:0,18,54	0/0:10,0:11:17.30:0,17,74	1/1:5,0:12:11.02:52,11,0	1/1:12,2:14:23.40:212,23,0	1/1:9,7:15:12.42:265,12,0	1/1:3,3:3:3.01:30,3,0
chr10	44308119	.	T	TC	4386.06	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-2.005;DP=593;FS=2.770;HRun=6;HaplotypeScore=73.0232;InbreedingCoeff=0.9640;MQ=58.86;MQ0=12;MQRankSum=0.051;QD=34.81;ReadPosRankSum=-0.333;VQSLOD=4.2986;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:78.17:0,78,795	0/0:10,0:10:27.06:0,27,275	0/0:22,0:7:8.33:0,8,90	0/0:14,0:8:18.01:0,18,174	0/0:28,0:28:75.16:0,75,765	0/0:21,0:21:63.13:0,63,634	0/0:23,0:23:66.15:0,66,673	0/0:23,0:18:54.11:0,54,546	0/0:30,0:30:81.15:0,81,812	1/1:2,31:33:96.31:1204,96,0	1/1:1,20:21:57.18:714,57,0	0/0:15,0:13:36.08:0,36,367	0/0:18,0:18:54.12:0,54,551	0/0:24,0:23:69.16:0,69,703	1/1:1,16:17:45.14:566,45,0	1/1:0,16:16:45.14:566,45,0	0/0:25,0:25:75.17:0,75,765	1/1:0,12:12:33.06:392,33,0	0/0:18,0:16:39.07:0,39,392	0/0:22,0:22:54.11:0,54,546	0/0:22,0:22:63.14:0,63,642	0/0:26,0:26:66.15:0,66,673	0/0:29,0:29:78.18:0,78,795	0/0:18,0:17:51.09:0,51,507	1/1:0,27:27:75.24:944,75,0	0/0:24,0:23:60.14:0,60,612	0/0:23,0:23:66.13:0,66,665	0/0:2,0:2:6.01:0,6,61
chr10	44312125	.	CAG	C	11199.60	PASS	AB=0.704;AC=33;AF=0.635;AN=52;BaseQRankSum=15.033;DP=719;FS=172.127;HRun=0;HaplotypeScore=326.3900;InbreedingCoeff=-0.0784;MQ=25.99;MQ0=147;MQRankSum=-2.400;QD=18.82;ReadPosRankSum=0.556;VQSLOD=1.0466;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:32,20:31:99:685,0,161	1/1:0,9:9:27.09:397,27,0	./.	./.	1/1:4,26:27:10.22:824,10,0	0/0:24,0:20:42.14:0,42,785	0/0:27,0:15:36.12:0,36,657	1/1:8,10:13:30.10:441,30,0	0/0:34,0:28:63.22:0,63,1172	0/1:14,20:29:99:795,0,205	1/1:2,17:18:45.12:645,45,0	0/1:22,10:26:99:337,0,556	0/1:21,10:23:99:342,0,447	0/1:18,14:27:99:494,0,490	0/1:18,14:21:75.91:396,0,76	0/1:14,5:11:99:102,0,360	0/1:12,8:10:32.02:273,0,32	0/1:7,11:15:25.97:367,0,26	0/1:14,4:8:42.56:120,0,43	1/1:6,15:19:45.15:660,45,0	1/1:26,14:17:26.31:375,26,0	0/1:5,20:23:48.60:770,0,49	1/1:3,15:18:42.14:608,42,0	1/1:8,9:10:8.50:132,8,0	1/1:6,23:27:69.23:1012,69,0	0/1:22,16:24:5.01:655,0,5	0/1:17,15:27:99:548,0,433	1/1:6,5:7:15.05:221,15,0
chr10	44312150	.	A	AC	9522.39	PASS	AB=0.726;AC=34;AF=0.654;AN=52;BaseQRankSum=15.842;DP=803;FS=197.700;HRun=2;HaplotypeScore=354.6962;InbreedingCoeff=-0.0406;MQ=23.62;MQ0=203;MQRankSum=-0.837;QD=14.32;ReadPosRankSum=0.068;VQSLOD=0.2305;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:53,18:28:99:356,0,164	1/1:0,9:9:27.09:362,27,0	./.	./.	1/1:3,28:28:51.03:632,51,0	0/0:20,0:14:27.09:0,27,369	0/0:33,0:18:33.11:0,33,452	1/1:10,11:11:33.11:493,33,0	0/0:41,0:34:75.25:0,75,1045	0/1:12,21:26:99:841,0,131	1/1:1,16:16:39.07:478,39,0	0/1:32,12:32:99:325,0,514	0/1:26,15:27:99:439,0,289	0/1:23,15:31:99:480,0,307	0/1:22,18:29:99:507,0,222	0/1:19,7:20:99:151,0,390	0/1:18,6:9:26.72:142,0,27	0/1:4,8:9:17.82:273,0,18	0/1:20,7:8:99:104,0,121	1/1:2,19:20:48.15:611,48,0	1/1:37,5:4:6.02:81,6,0	1/1:3,21:20:51.16:652,51,0	1/1:1,18:19:36.10:431,36,0	1/1:13,5:4:12.04:153,12,0	1/1:2,21:21:57.19:756,57,0	0/1:23,19:26:99:751,0,215	0/1:17,11:24:99:374,0,239	1/1:7,6:6:9.03:130,9,0
chr10	44312152	.	GAT	G	9807.36	PASS	AB=0.729;AC=34;AF=0.654;AN=52;BaseQRankSum=15.883;DP=810;FS=206.339;HRun=0;HaplotypeScore=359.8156;InbreedingCoeff=-0.0428;MQ=23.45;MQ0=208;MQRankSum=-0.736;QD=14.62;ReadPosRankSum=0.293;VQSLOD=0.8050;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:54,18:28:99:368,0,258	1/1:0,9:9:27.09:373,27,0	./.	./.	1/1:3,28:28:51.16:653,51,0	0/0:20,0:14:27.09:0,27,547	0/0:33,0:18:33.11:0,33,668	1/1:12,11:11:33.11:505,33,0	0/0:40,0:33:72.23:0,72,1421	0/1:12,21:26:99:860,0,226	1/1:1,16:16:39.10:498,39,0	0/1:33,12:32:99:336,0,778	0/1:25,15:26:99:447,0,480	0/1:23,15:31:99:496,0,477	0/1:22,19:29:99:537,0,359	0/1:19,7:20:99:157,0,620	0/1:19,6:9:45.62:146,0,46	0/1:4,8:9:36.74:283,0,37	0/1:22,7:10:92.30:92,0,277	1/1:1,20:20:48.15:631,48,0	1/1:37,5:4:5.50:82,6,0	1/1:3,21:20:51.17:672,51,0	1/1:1,18:19:36.11:449,36,0	1/1:13,5:4:12.04:158,12,0	1/1:2,21:21:57.19:778,57,0	0/1:24,18:26:99:766,0,348	0/1:17,11:24:99:386,0,371	1/1:7,6:6:9.03:134,9,0
chr10	44312219	.	G	GC	14175.60	PASS	AB=0.808;AC=32;AF=0.615;AN=52;BaseQRankSum=16.140;DP=1075;FS=175.215;HRun=0;HaplotypeScore=278.5529;InbreedingCoeff=-0.0155;MQ=23.25;MQ0=251;MQRankSum=-0.767;QD=17.57;ReadPosRankSum=0.865;VQSLOD=0.4155;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:84,9:36:99:230,0,487	1/1:0,10:10:24.08:382,24,0	./.	./.	1/1:1,25:22:39.13:621,39,0	0/0:26,0:20:36.12:0,36,502	0/0:39,0:16:27.09:0,27,376	0/1:28,4:7:32.83:33,0,150	0/0:39,0:33:48.16:0,48,669	1/1:4,39:40:99:1820,114,0	1/1:0,23:23:57.19:907,57,0	0/1:32,17:32:99:549,0,388	0/1:25,24:31:99:695,0,223	0/1:30,13:30:99:430,0,203	0/1:27,22:40:99:645,0,301	0/1:16,14:26:99:561,0,233	0/1:37,3:16:68.52:69,0,266	0/1:22,2:12:32.80:33,0,152	0/1:24,6:13:99:114,0,263	1/1:0,32:31:87.30:1386,87,0	0/0:99,7:27:12.04:0,12,167	1/1:4,40:41:99:1766,111,0	1/1:2,28:28:78.27:1241,78,0	0/1:35,4:17:35.71:36,0,113	1/1:3,31:34:84.29:1339,84,0	0/1:33,16:28:99:553,0,348	1/1:10,16:14:0.24:575,0,0	1/1:7,5:5:12.04:191,12,0
chr10	44312404	.	C	CT	7895.62	PASS	AB=0.648;AC=20;AF=0.385;AN=52;BaseQRankSum=1.978;DP=1031;FS=30.046;HRun=1;HaplotypeScore=115.6654;InbreedingCoeff=0.1804;MQ=33.98;MQ0=179;MQRankSum=-2.506;QD=15.04;ReadPosRankSum=-1.123;VQSLOD=2.9281;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:93,0:75:69.22:0,69,870	0/1:3,11:14:2.65:448,0,3	./.	./.	0/0:29,0:26:20.64:0,21,272	0/0:19,0:16:27.09:0,27,350	0/0:30,0:25:48.14:0,48,600	1/1:14,15:11:2.26:329,2,0	0/0:35,0:32:54.18:0,54,700	0/1:11,23:29:99:865,0,116	1/1:5,5:9:11.95:130,12,0	0/1:21,30:39:81.05:691,0,81	1/1:17,21:27:44.98:673,45,0	0/1:24,22:40:1.67:681,0,2	0/1:24,24:40:7.59:715,0,8	0/1:20,12:25:48.14:287,0,48	0/1:37,28:58:99:776,0,296	0/1:14,15:25:32.19:539,0,32	0/0:39,0:25:69.22:0,69,895	0/0:28,0:23:27.07:0,27,333	0/0:90,0:73:99:0,120,1549	1/1:9,21:25:0.68:399,1,0	0/1:7,17:23:63.64:370,0,64	0/1:27,23:43:99:600,0,129	1/1:11,13:22:32.94:393,33,0	0/0:46,1:30:87.16:0,87,1059	0/0:31,0:25:39.13:0,39,498	0/0:6,0:6:9:0,9,99
chr10	44312793	.	CTGTGTGTG	C	2674.07	PASS	AB=0.933;AC=20;AF=0.370;AN=54;BaseQRankSum=0.730;DP=700;FS=28.955;HRun=0;HaplotypeScore=180.9593;InbreedingCoeff=0.5102;MQ=57.85;MQ0=37;MQRankSum=-5.095;QD=7.68;ReadPosRankSum=-1.853;VQSLOD=0.9057;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:18,17:38:30.06:638,30,0	0/0:12,0:12:11.32:0,11,388	./.	0/1:87,0:25:0:0,0,0	1/1:1,5:7:14.92:191,15,0	0/0:21,0:22:36.12:0,36,1215	0/0:24,0:24:21.03:0,21,589	1/1:23,0:22:4.19:13,4,0	0/0:17,0:17:27.08:0,27,885	0/0:16,0:16:18.05:0,18,518	0/0:7,0:8:24.07:0,24,766	0/1:26,0:26:22.41:22,0,257	0/0:32,0:31:42.76:0,43,328	0/0:20,0:19:39.35:0,39,233	0/0:20,0:24:42.13:0,42,1254	0/0:15,0:15:24.07:0,24,742	0/0:19,0:19:3.90:0,4,102	0/0:18,0:20:54.11:0,54,1461	1/1:14,5:19:15.18:340,15,0	1/1:5,5:9:11.96:172,12,0	0/1:47,0:45:21.18:21,0,71	0/1:19,0:19:42.02:42,0,118	0/1:15,0:15:19.12:19,0,132	0/0:32,0:32:39.86:0,40,209	0/0:16,0:16:26.91:0,27,741	1/1:10,9:18:25.30:407,25,0	1/1:13,12:23:12.23:640,12,0	0/1:3,6:9:92.59:355,0,93
chr10	44312799	.	G	GTGTT	1136.90	PASS	AB=0.934;AC=9;AF=0.161;AN=56;BaseQRankSum=0.080;DP=722;FS=12.303;HRun=0;HaplotypeScore=163.8926;InbreedingCoeff=0.1436;MQ=55.21;MQ0=40;MQRankSum=1.106;QD=6.25;ReadPosRankSum=1.497;VQSLOD=2.1737;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:61.84:0,62,507	0/1:12,1:13:41.66:90,0,42	0/0:81,0:18:47.87:0,48,448	0/0:87,0:24:30.89:0,31,324	0/0:7,0:7:17.35:0,17,115	0/0:19,0:19:51.47:0,51,613	0/0:23,0:23:62.92:0,63,631	0/0:21,0:19:47.93:0,48,415	0/0:22,0:22:50.75:0,51,599	0/0:23,0:23:59.87:0,60,595	0/0:9,0:9:27.04:0,27,378	0/1:24,0:24:43.97:208,0,44	0/1:32,0:31:99:214,0,104	0/1:23,0:22:39.43:126,0,39	0/0:24,0:24:44.83:0,45,700	0/0:18,0:18:50.37:0,50,587	0/1:7,11:19:2.56:76,0,3	0/0:22,0:22:52.74:0,53,577	0/0:20,0:18:44.95:0,45,404	0/0:11,0:9:14.46:0,14,99	0/0:49,0:49:80.64:0,81,630	0/1:21,0:21:27.37:122,0,27	0/1:18,0:18:63.84:96,0,64	1/1:32,0:31:24.05:352,24,0	0/0:17,0:17:40.85:0,41,420	0/0:16,0:15:33.34:0,33,288	0/0:24,0:21:59.96:0,60,557	0/0:9,0:9:20.99:0,21,208
chr10	44312801	.	G	GTT	1661	PASS	AB=0.893;AC=12;AF=0.214;AN=56;BaseQRankSum=6.960;DP=734;FS=8.634;HRun=1;HaplotypeScore=135.0567;InbreedingCoeff=0.5780;MQ=53.00;MQ0=43;MQRankSum=2.900;QD=8.98;ReadPosRankSum=6.092;VQSLOD=0.1924;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:58.44:0,58,384	0/1:3,7:12:36.30:78,0,36	0/0:80,0:17:47.87:0,48,448	0/0:87,0:24:39.85:0,40,403	0/0:7,0:7:17.66:0,18,112	0/0:19,0:19:33.33:0,33,538	0/0:23,0:23:65.95:0,66,624	0/0:21,0:18:47.93:0,48,415	0/0:21,0:21:50.83:0,51,518	0/0:24,0:24:59.86:0,60,564	0/0:9,0:9:27.01:0,27,319	1/1:24,0:24:39.70:332,40,0	1/1:32,0:31:5.71:325,6,0	0/1:24,0:23:13.33:200,0,13	0/0:24,0:24:59.72:0,60,632	0/0:18,0:18:50.76:0,51,496	0/1:17,0:17:3.04:31,0,3	0/0:22,0:22:60.24:0,60,554	0/0:21,0:19:47.78:0,48,382	0/0:11,0:9:14.77:0,15,94	0/0:53,0:51:86.26:0,86,665	0/1:23,0:21:13.99:190,0,14	1/1:19,0:19:7.56:153,8,0	1/1:34,0:33:77.71:520,78,0	0/0:19,0:19:41.49:0,41,383	0/0:17,0:16:33.20:0,33,246	0/0:24,0:21:59.49:0,59,432	0/0:10,0:10:20.72:0,21,139
chr10	44312802	.	TG	T	584.70	PASS	AB=0.693;AC=6;AF=0.107;AN=56;BaseQRankSum=12.534;DP=753;FS=1.579;HRun=1;HaplotypeScore=129.8401;InbreedingCoeff=-0.1294;MQ=51.60;MQ0=46;MQRankSum=-0.301;QD=3.70;ReadPosRankSum=8.005;VQSLOD=0.0766;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:28.80:0,29,379	0/0:12,0:12:14.77:0,15,152	0/0:80,0:17:48.15:0,48,598	0/0:87,0:23:59.74:0,60,689	0/0:8,0:8:11.37:0,11,150	0/0:20,0:20:56.07:0,56,749	0/0:23,0:23:66.19:0,66,863	0/0:23,0:19:54.16:0,54,666	0/0:23,0:23:53.82:0,54,740	0/0:23,0:23:63.21:0,63,853	0/0:11,0:11:28.32:0,28,392	0/1:12,12:24:51.35:117,0,51	0/1:15,17:31:99:145,0,117	0/1:13,12:24:88.98:121,0,89	0/0:24,0:24:57.28:0,57,755	0/0:18,0:18:50.38:0,50,677	0/0:18,0:18:9.39:0,9,92	0/0:21,0:21:59.28:0,59,753	0/0:22,0:19:42.89:0,43,512	0/0:12,0:10:7.76:0,8,112	0/0:55,0:53:95.20:0,95,1183	0/1:13,10:21:99:106,0,161	0/1:13,7:20:67.76:68,0,99	0/1:21,13:33:99:151,0,121	0/0:19,0:19:41.17:0,41,566	0/0:19,0:18:34:0,34,403	0/0:26,0:23:31.79:0,32,421	0/0:10,0:10:11.41:0,11,146
chr10	44312804	.	TGTG	T	1611.29	PASS	AB=0.832;AC=11;AF=0.196;AN=56;BaseQRankSum=14.461;DP=764;FS=5.513;HRun=0;HaplotypeScore=143.7184;InbreedingCoeff=-0.2393;MQ=50.31;MQ0=47;MQRankSum=-2.016;QD=6.20;ReadPosRankSum=10.007;VQSLOD=0.5060;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:41,0:41:55.62:56,0,445	0/0:11,0:11:18.06:0,18,360	0/0:76,0:14:42.13:0,42,532	0/0:87,0:22:56.75:0,57,668	0/1:9,0:9:7.07:7,0,165	0/0:20,0:20:56.92:0,57,1018	0/0:22,0:22:63.21:0,63,972	0/0:25,0:21:57.13:0,57,694	0/0:25,0:25:63:0,63,1057	0/0:25,0:25:72.23:0,72,1127	0/0:12,0:12:25.08:0,25,604	0/1:12,12:24:82.23:271,0,82	0/1:15,15:31:99:377,0,108	0/1:13,12:24:79.85:301,0,80	0/0:24,0:24:59.80:0,60,998	0/0:17,0:17:48.05:0,48,838	0/0:17,0:17:12.93:0,13,182	0/0:23,0:23:68.69:0,69,1143	0/0:22,0:19:7.97:0,8,494	0/1:13,0:11:1.02:1,0,235	0/0:58,0:56:99:0,104,1272	0/1:13,9:21:99:228,0,137	0/1:13,5:20:99:122,0,112	0/1:21,13:33:99:301,0,214	0/0:19,0:19:42.01:0,42,717	0/0:21,0:19:5.62:0,6,452	0/1:28,0:25:52.78:53,0,465	0/1:11,0:11:36.94:37,0,168
chr10	44316404	.	A	AC	4818.85	PASS	AB=1.000;AC=24;AF=0.429;AN=56;BaseQRankSum=-11.345;DP=514;FS=2.213;HRun=0;HaplotypeScore=97.8885;InbreedingCoeff=0.1671;MQ=63.71;MQ0=1;MQRankSum=1.216;QD=14.51;ReadPosRankSum=-1.201;VQSLOD=6.1461;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:19:2.13:0,2,76	0/1:6,0:6:5.22:36,0,5	0/0:10,0:5:5.20:0,5,120	0/0:10,0:9:20.01:0,20,214	0/1:20,0:20:5.67:6,0,60	0/0:25,0:25:75.23:0,75,1026	0/0:10,0:10:30.09:0,30,403	0/0:36,0:35:99:0,102,1305	0/0:15,0:15:19.89:0,20,506	0/1:22,0:22:4.08:4,0,66	0/1:29,0:29:56.77:57,0,61	1/1:0,11:11:30.10:475,30,0	1/1:0,12:13:35.71:534,36,0	1/1:0,13:13:30.10:477,30,0	0/1:18,0:18:15.61:16,0,44	0/0:8,0:8:10.16:0,10,27	0/1:30,0:31:11.49:11,0,97	0/1:19,0:20:5.78:6,0,71	0/1:13,0:13:10.85:11,0,27	0/0:24,0:24:44.92:0,45,155	0/1:8,0:8:8.04:8,0,17	1/1:4,22:26:71.22:1093,71,0	1/1:0,31:30:90.31:1426,90,0	1/1:1,12:13:36.07:571,36,0	0/0:25,0:25:16.51:0,17,77	0/1:23,0:23:18.45:18,0,26	0/1:25,0:25:24.77:25,0,63	0/1:10,0:10:13.30:45,0,13
chr10	44316893	.	CA	C	6539.47	PASS	AB=0.652;AC=26;AF=0.464;AN=56;BaseQRankSum=18.994;DP=561;FS=10.303;HRun=1;HaplotypeScore=140.5724;InbreedingCoeff=0.8468;MQ=48.17;MQ0=10;MQRankSum=-17.275;QD=26.05;ReadPosRankSum=2.224;VQSLOD=3.7075;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:4,7:11:17.46:191,0,17	0/0:12,0:12:36.12:0,36,568	0/0:21,0:11:30.10:0,30,482	0/0:21,0:18:54.10:0,54,810	1/1:0,27:27:59.88:625,60,0	0/0:20,0:20:60.20:0,60,955	0/0:20,0:20:60.19:0,60,936	0/0:26,0:25:75.24:0,75,1155	0/0:23,0:23:69.24:0,69,1101	1/1:0,22:22:65.89:632,66,0	1/1:0,20:20:51.05:519,51,0	0/0:15,0:15:45.15:0,45,705	0/0:19,0:19:57.18:0,57,884	0/0:22,0:22:66.22:0,66,1051	1/1:0,21:21:63.07:594,63,0	1/1:0,16:16:48.04:434,48,0	0/0:36,0:36:99:0,108,1700	0/1:5,4:9:19.09:99,0,19	1/1:2,9:7:21.04:216,21,0	1/1:0,30:30:87.08:872,87,0	1/1:0,8:8:21.05:244,21,0	0/0:26,0:26:78.27:0,78,1244	0/0:23,0:23:69.22:0,69,1074	0/0:25,0:25:72.16:0,72,1099	1/1:2,22:24:69.08:657,69,0	1/1:1,17:18:54.07:520,54,0	1/1:2,25:27:81.06:794,81,0	1/1:3,4:7:7.72:142,8,0
chr10	44316895	.	CTGGGA	C	10374.83	PASS	AB=0.654;AC=25;AF=0.446;AN=56;BaseQRankSum=18.738;DP=568;FS=8.765;HRun=0;HaplotypeScore=169.9929;InbreedingCoeff=0.7820;MQ=48.01;MQ0=11;MQRankSum=-17.363;QD=41.01;ReadPosRankSum=2.314;VQSLOD=4.4145;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:4,7:11:99:262,0,252	0/0:10,0:10:30.10:0,30,939	0/0:23,0:11:33.11:0,33,993	0/0:21,0:17:44.97:0,45,1419	1/1:1,25:26:59.99:840,60,0	0/0:22,0:22:66.23:0,66,2096	0/0:20,0:20:57.20:0,57,1796	0/0:30,0:29:87.29:0,87,2667	0/0:25,0:25:75.26:0,75,2382	1/1:1,21:22:63.21:1079,63,0	1/1:2,18:20:51.06:760,51,0	0/0:15,0:15:42.14:0,42,1316	0/0:18,0:18:54.17:0,54,1628	0/0:23,0:23:69.24:0,69,2118	1/1:2,20:22:66.17:1073,66,0	1/1:0,16:16:48.16:805,48,0	0/0:35,0:35:99:0,105,3168	0/1:6,4:10:99:185,0,216	1/1:2,9:7:21.06:339,21,0	1/1:1,28:29:84.08:1243,84,0	1/1:1,8:9:21.01:282,21,0	0/0:26,0:26:75.25:0,75,2243	0/0:23,0:23:66.22:0,66,2024	0/0:24,0:24:72.25:0,72,2239	1/1:2,22:24:66.22:1099,66,0	1/1:2,17:19:57.18:951,57,0	1/1:2,25:27:81.19:1270,81,0	0/1:3,4:7:79.83:188,0,80
chr10	44317607	.	AT	A	2335.51	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-4.351;DP=562;FS=5.699;HRun=10;HaplotypeScore=91.3665;InbreedingCoeff=0.9868;MQ=60.43;MQ0=2;MQRankSum=0.489;QD=20.49;ReadPosRankSum=2.125;VQSLOD=4.3755;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:50.29:0,50,515	0/0:6,0:6:12.03:0,12,133	0/0:11,0:8:15.69:0,16,180	0/0:19,0:8:14.94:0,15,128	0/0:22,0:23:49.30:0,49,615	0/0:30,1:31:58.16:0,58,863	0/0:20,0:22:59.81:0,60,615	0/0:29,1:31:42.96:0,43,678	0/0:17,0:17:45.12:0,45,498	0/0:16,0:16:45.12:0,45,492	0/0:25,0:26:78.03:0,78,835	1/1:0,17:17:44.99:391,45,0	1/1:3,18:22:50.03:423,50,0	1/1:1,14:15:41.99:365,42,0	0/0:18,0:18:51.11:0,51,542	0/0:13,0:13:39.10:0,39,424	0/0:38,2:40:50.22:0,50,1000	0/0:21,0:21:51.07:0,51,549	0/0:16,0:15:30.08:0,30,331	0/0:22,0:22:57.14:0,57,622	0/0:13,0:13:36.07:0,36,381	1/1:2,14:16:41.02:356,41,0	1/1:3,22:25:62.98:547,63,0	1/1:1,18:19:50.98:443,51,0	0/0:15,0:18:50.80:0,51,520	0/0:25,1:26:43.12:0,43,690	0/0:30,0:30:87.22:0,87,953	0/0:8,0:8:21.06:0,21,232
chr10	44317785	.	AT	A	694.63	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=7.471;DP=573;FS=3.288;HRun=8;HaplotypeScore=51.2422;InbreedingCoeff=0.8208;MQ=59.88;MQ0=9;MQRankSum=0.663;QD=13.89;ReadPosRankSum=1.109;VQSLOD=3.1662;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:92.98:0,93,1078	1/1:1,10:11:27.04:261,27,0	0/1:17,0:3:2.69:3,0,62	0/0:16,0:4:8.89:0,9,83	0/0:27,0:27:78.20:0,78,908	0/0:17,0:17:48.15:0,48,579	0/0:8,0:8:24.07:0,24,290	0/0:32,0:30:48.84:0,49,749	0/0:13,0:13:39.12:0,39,471	0/0:27,0:27:81.19:0,81,944	0/0:29,0:29:81.25:0,81,979	0/0:13,0:13:39.10:0,39,450	0/0:22,1:23:37.19:0,37,716	0/0:13,0:13:36.09:0,36,422	0/0:17,0:17:48.15:0,48,580	0/0:8,0:8:24.07:0,24,290	1/1:1,21:22:58.65:554,59,0	0/0:17,0:17:36.11:0,36,435	0/0:17,0:15:33.10:0,33,399	0/0:25,0:25:63.19:0,63,761	0/0:15,0:15:42.07:0,42,460	0/0:23,0:23:63.19:0,63,761	0/0:33,0:33:87.23:0,87,1018	0/0:13,0:13:21.06:0,21,254	0/0:23,0:23:69.21:0,69,833	0/0:28,0:28:81.24:0,81,968	0/0:36,0:36:99:0,105,1233	0/0:15,0:15:45.14:0,45,543
chr10	44318727	.	A	AT	12024.06	PASS	AB=1.000;AC=45;AF=0.804;AN=56;BaseQRankSum=4.293;DP=492;FS=8.001;HRun=6;HaplotypeScore=61.7103;InbreedingCoeff=0.8794;MQ=55.04;MQ0=8;MQRankSum=-1.347;QD=30.29;ReadPosRankSum=3.883;VQSLOD=5.3689;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,23:27:62.22:784,62,0	1/1:1,6:7:18.06:226,18,0	0/0:19,0:5:15.03:0,15,151	0/1:12,0:5:17.94:18,0,75	1/1:1,23:24:63.20:792,63,0	0/0:21,0:21:63.11:0,63,628	0/0:21,0:21:54.08:0,54,540	0/0:19,0:18:39.08:0,39,398	0/0:14,0:14:39.09:0,39,398	1/1:1,21:22:63.20:793,63,0	1/1:1,23:23:66.21:830,66,0	1/1:2,7:9:18.02:209,18,0	1/1:1,13:14:39.12:490,39,0	1/1:2,16:18:42.13:524,42,0	1/1:0,13:13:30.09:369,30,0	1/1:1,10:11:27.09:336,27,0	1/1:2,30:32:75.24:943,75,0	1/1:1,17:18:48.14:590,48,0	1/1:5,15:18:45.14:566,45,0	1/1:1,24:25:72.23:905,72,0	1/1:2,8:9:18.06:222,18,0	1/1:0,10:10:27.08:334,27,0	1/1:2,22:24:54.16:670,54,0	1/1:0,12:12:30.10:377,30,0	1/1:0,12:12:36.11:439,36,0	1/1:2,19:21:51.14:626,51,0	1/1:1,20:21:48.15:604,48,0	1/1:0,11:11:30.10:377,30,0
chr10	44319112	.	TTGTG	T	674	PASS	AB=1.000;AC=17;AF=0.340;AN=50;BaseQRankSum=0.760;DP=560;FS=0.000;HRun=0;HaplotypeScore=114.0978;InbreedingCoeff=0.6270;MQ=46.66;MQ0=36;MQRankSum=2.194;QD=3.34;ReadPosRankSum=0.750;VQSLOD=2.1557;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:11:2.88:0,3,54	0/0:9,0:9:15.04:0,15,288	./.	./.	1/1:36,0:34:0.34:1,0,0	0/0:27,0:26:45.13:0,45,913	0/0:12,0:11:6.02:0,6,123	1/1:19,0:23:3.78:16,4,0	0/0:11,0:17:17.94:0,18,277	1/1:18,12:29:20.79:253,21,0	1/1:19,13:32:19.17:202,19,0	0/0:11,0:21:6.02:0,6,104	0/0:10,0:17:11.93:0,12,194	0/0:12,0:12:11.99:0,12,210	1/1:11,5:16:3.48:48,3,0	1/1:10,10:19:15.04:215,15,0	0/0:16,0:10:12.03:0,12,228	1/1:10,1:11:1.21:44,1,0	0/0:10,0:9:2.92:0,3,17	./.	0/1:11,0:9:0:0,0,0	0/0:12,0:19:11.07:0,11,156	0/0:14,0:17:9.03:0,9,155	0/0:19,0:25:8.85:0,9,128	1/1:9,11:20:3.01:47,3,0	0/0:21,0:19:17.64:0,18,193	0/0:19,0:18:9.03:0,9,155	0/0:6,0:5:3.01:0,3,71
chr10	44319415	.	C	CTG	30460.25	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-14.419;DP=765;FS=0.000;HRun=0;HaplotypeScore=78.9486;InbreedingCoeff=0.9967;MQ=68.99;MQ0=0;MQRankSum=-5.875;QD=51.72;ReadPosRankSum=7.239;VQSLOD=5.6236;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,45:47:99:2314,114,0	1/1:0,12:12:33.11:670,33,0	0/0:22,0:22:47.41:0,47,916	0/0:34,0:34:95.97:0,96,1482	1/1:0,24:23:63.22:1251,63,0	0/0:27,0:27:78.25:0,78,1246	0/0:28,0:28:81.18:0,81,1201	0/0:35,0:35:96.22:0,96,1471	0/0:30,0:30:87.30:0,87,1397	1/1:0,26:28:81.25:1554,81,0	1/1:0,24:25:63.22:1279,63,0	1/1:1,33:35:84.29:1705,84,0	1/1:0,24:27:66.13:1317,66,0	1/1:0,25:25:63.22:1279,63,0	1/1:0,27:28:72.25:1462,72,0	1/1:1,23:24:66.23:1341,66,0	1/1:0,22:22:63.22:1278,63,0	1/1:2,19:22:51.13:981,51,0	1/1:0,19:21:57.10:1003,57,0	1/1:1,23:25:63.21:1252,63,0	1/1:0,54:56:99:3169,157,0	1/1:0,25:24:57.20:1152,57,0	1/1:0,24:24:57.20:1156,57,0	1/1:0,38:38:99:2255,111,0	1/1:0,25:27:57.20:1156,57,0	1/1:0,25:25:72.18:1364,72,0	1/1:1,21:23:60.21:1218,60,0	1/1:0,5:5:15.05:304,15,0
chr10	44322388	.	T	TG	2971.22	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-10.100;DP=487;FS=9.887;HRun=4;HaplotypeScore=40.9646;InbreedingCoeff=0.9733;MQ=58.86;MQ0=3;MQRankSum=0.360;QD=33.38;ReadPosRankSum=0.569;VQSLOD=3.3699;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:72.20:0,72,816	0/0:13,0:13:39.11:0,39,442	0/0:16,0:10:15.04:0,15,170	0/0:19,0:10:21.06:0,21,236	0/0:31,0:31:93.27:0,93,1054	0/0:17,0:17:51.15:0,51,578	0/0:9,0:9:27.06:0,27,296	0/0:30,0:30:81.23:0,81,919	0/0:24,0:23:63.18:0,63,714	1/1:2,16:18:48.15:640,48,0	1/1:0,19:19:57.10:755,57,0	0/0:10,0:10:24.07:0,24,272	0/0:15,0:15:45.13:0,45,510	0/0:11,0:11:30.07:0,30,330	1/1:2,16:18:45.15:615,45,0	1/1:0,14:14:30.10:410,30,0	0/0:21,0:20:63.18:0,63,714	1/1:0,7:7:18.06:246,18,0	0/0:17,0:16:48.14:0,48,544	0/0:29,0:29:78.16:0,78,862	0/0:11,0:11:27.08:0,27,306	0/0:11,0:11:30.07:0,30,331	0/0:16,0:16:45.11:0,45,499	0/0:17,0:17:48.14:0,48,544	1/1:0,13:13:36.12:492,36,0	0/0:24,2:26:8.19:0,8,666	0/0:24,0:24:66.19:0,66,748	0/0:4,0:4:12.03:0,12,136
chr10	44324904	.	AC	A	992.85	PASS	AB=0.819;AC=36;AF=0.947;AN=38;BaseQRankSum=-2.995;DP=62;FS=26.596;HRun=2;HaplotypeScore=13.3864;InbreedingCoeff=-0.1990;MQ=84.16;MQ0=0;MQRankSum=-3.045;QD=17.12;ReadPosRankSum=-0.277;VQSLOD=1.5430;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,3:3:3.01:39,3,0	./.	0/1:6,3:4:23.36:23,0,25	0/1:6,1:5:11.91:12,0,26	1/1:0,3:3:5.94:41,6,0	1/1:0,1:1:3.01:39,3,0	./.	1/1:0,9:9:27.09:344,27,0	1/1:0,2:2:3.01:39,3,0	1/1:0,1:1:3.01:39,3,0	1/1:0,1:1:3.01:39,3,0	./.	1/1:0,1:1:3.01:39,3,0	1/1:0,1:1:3.01:39,3,0	./.	1/1:0,2:2:3.01:39,3,0	./.	1/1:0,1:2:3.01:39,3,0	1/1:0,1:1:3.01:39,3,0	./.	1/1:0,1:1:3.01:36,3,0	./.	1/1:0,4:4:3.01:39,3,0	./.	1/1:0,4:4:5.98:59,6,0	1/1:0,4:4:9.02:103,9,0	1/1:0,1:1:3.01:39,3,0	./.
chr10	44327056	.	A	ATGTGTGTGTGTGTG	6593.06	PASS	AB=0.767;AC=30;AF=0.536;AN=56;BaseQRankSum=4.841;DP=619;FS=0.000;HRun=0;HaplotypeScore=167.8540;InbreedingCoeff=0.7139;MQ=40.91;MQ0=91;MQRankSum=-10.355;QD=26.48;ReadPosRankSum=-4.021;VQSLOD=3.0549;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:23:27.09:1235,27,0	1/1:0,0:7:9.03:448,9,0	0/0:57,0:6:17.91:0,18,520	0/0:50,0:10:24.75:0,25,762	1/1:2,0:24:18.06:817,18,0	0/0:33,0:32:75.24:0,75,2969	0/0:21,0:20:36.12:0,36,1300	1/1:16,0:12:17.82:132,18,0	0/0:36,0:36:84.27:0,84,3171	0/0:38,0:38:99:0,104,3338	0/0:23,0:23:45.15:0,45,1850	0/0:13,0:12:0.47:0,0,2	1/1:11,0:10:9.62:51,10,0	1/1:9,0:8:2.96:19,3,0	0/0:22,0:22:51.11:0,51,1992	0/0:30,0:29:72.02:0,72,2730	1/1:4,0:7:2.47:106,2,0	0/0:16,0:13:27.08:0,27,911	1/1:7,7:17:32.52:673,33,0	1/1:1,10:15:14.40:993,14,0	1/1:10,8:10:2.47:156,2,0	1/1:12,0:9:3.01:182,3,0	1/1:16,0:16:2.97:175,3,0	0/1:8,0:7:0:0,0,0	0/0:31,0:30:72.25:0,72,3024	0/1:3,0:23:12.79:559,0,13	1/1:18,3:19:20.06:935,20,0	1/1:0,0:4:3.01:113,3,0
chr10	44327823	.	CTCTCTG	C	952.91	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.849;DP=627;FS=28.089;HRun=0;HaplotypeScore=135.2458;InbreedingCoeff=0.7605;MQ=55.38;MQ0=15;MQRankSum=-6.197;QD=28.03;ReadPosRankSum=-3.785;VQSLOD=1.0028;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:51.17:0,51,1563	0/0:17,0:17:30.01:0,30,788	0/0:31,0:7:6.02:0,6,125	0/0:40,0:11:2.61:0,3,25	0/0:20,0:20:33.11:0,33,1007	0/0:28,0:28:51.16:0,51,1339	0/0:21,0:21:45.15:0,45,1234	1/1:11,23:29:72.07:1048,72,0	0/0:18,0:18:45.10:0,45,1257	0/0:28,0:28:60.20:0,60,1799	0/0:19,0:19:39.12:0,39,1038	0/0:23,0:23:39.13:0,39,1257	0/0:20,0:20:45.15:0,45,1285	0/0:20,0:20:54.18:0,54,1473	0/0:26,0:26:72.20:0,72,1818	0/0:18,0:18:45.14:0,45,1305	0/0:15,0:15:30.10:0,30,813	0/0:18,0:18:48.12:0,48,1292	0/0:13,0:12:24.02:0,24,531	0/0:13,0:12:17.53:0,18,436	0/0:29,0:28:51.11:0,51,1328	0/0:27,0:27:54.03:0,54,1282	0/0:19,0:19:42.14:0,42,1185	0/0:30,0:30:48.15:0,48,1239	0/0:13,0:13:33.09:0,33,863	0/0:20,0:20:48.10:0,48,1343	0/0:29,0:29:63.22:0,63,1786	0/0:9,0:8:18.06:0,18,586
chr10	44327862	.	C	CCT	9166.10	PASS	AB=1.000;AC=34;AF=0.607;AN=56;BaseQRankSum=-10.857;DP=757;FS=1.211;HRun=0;HaplotypeScore=93.1895;InbreedingCoeff=0.8200;MQ=57.17;MQ0=32;MQRankSum=2.946;QD=17.87;ReadPosRankSum=3.111;VQSLOD=5.1504;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,24:31:45.15:729,45,0	1/1:1,10:12:20.43:301,20,0	0/1:47,0:7:6.01:6,0,31	0/1:82,0:20:21.60:22,0,92	1/1:6,19:25:2.47:535,2,0	0/0:20,0:20:35.98:0,36,459	0/0:24,0:24:52.71:0,53,627	0/0:38,0:33:63.15:0,63,745	0/0:26,0:26:66.01:0,66,759	0/0:21,0:20:45.13:0,45,541	0/0:19,0:20:50.82:0,51,578	1/1:8,18:26:30.10:485,30,0	1/1:5,20:25:42.14:680,42,0	1/1:3,18:21:39.13:633,39,0	0/0:35,0:36:90.08:0,90,1051	0/0:22,0:22:45.14:0,45,550	1/1:3,18:20:30.10:486,30,0	0/0:21,0:21:45.02:0,45,509	1/1:18,10:26:50.17:688,50,0	1/1:2,10:13:14.97:232,15,0	1/1:12,24:36:48.15:755,48,0	1/1:5,17:22:24:332,24,0	1/1:6,13:21:15.05:243,15,0	1/1:7,23:30:60.20:973,60,0	0/0:16,0:16:36.11:0,36,439	1/1:6,21:29:24.22:902,24,0	1/1:6,29:35:66.22:1070,66,0	1/1:8,1:9:6.02:93,6,0
chr10	44328977	.	AT	A	382.04	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=1.943;DP=366;FS=8.795;HRun=8;HaplotypeScore=42.4726;InbreedingCoeff=0.8306;MQ=68.94;MQ0=2;MQRankSum=-0.470;QD=19.10;ReadPosRankSum=-3.712;VQSLOD=1.7021;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:50.78:0,51,574	0/0:8,0:8:24.07:0,24,290	0/0:11,0:10:21.05:0,21,227	0/0:12,0:10:8.24:0,8,77	0/0:16,0:16:45.14:0,45,544	0/0:15,0:14:36.11:0,36,435	0/0:15,0:15:45.10:0,45,526	1/1:2,18:20:51.02:477,51,0	0/0:15,0:15:33.10:0,33,399	0/0:18,0:18:45.14:0,45,543	0/0:14,0:14:36.11:0,36,433	0/0:13,0:13:36.11:0,36,435	0/0:5,0:5:15.05:0,15,181	0/0:7,0:7:9.03:0,9,109	0/0:13,0:13:33.06:0,33,382	0/0:11,0:11:27.08:0,27,326	0/0:9,0:9:24.07:0,24,290	0/0:9,0:9:14.72:0,15,156	0/0:17,0:17:39.12:0,39,471	0/0:17,0:17:39.12:0,39,465	0/0:6,0:6:15.05:0,15,181	0/0:13,0:13:33.08:0,33,385	0/0:14,0:14:36.11:0,36,435	0/0:5,0:5:15.05:0,15,180	0/0:16,0:16:45.10:0,45,527	0/0:15,0:15:33.10:0,33,398	0/0:17,0:17:42.13:0,42,507	0/0:12,0:12:30.09:0,30,362
chr10	44329039	.	TC	T	4493.39	PASS	AB=0.572;AC=37;AF=0.685;AN=54;BaseQRankSum=6.765;DP=240;FS=11.395;HRun=3;HaplotypeScore=24.8942;InbreedingCoeff=0.2917;MQ=44.02;MQ0=21;MQRankSum=-3.183;QD=23.90;ReadPosRankSum=0.248;VQSLOD=2.7085;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:3,12:13:15.94:250,0,16	1/1:0,1:1:3.01:37,3,0	0/0:8,0:1:3.01:0,3,32	./.	1/1:0,8:8:24.03:278,24,0	0/0:6,0:6:18.06:0,18,259	0/0:10,0:8:18.05:0,18,240	0/0:15,0:12:33.11:0,33,474	0/0:6,0:5:15.05:0,15,215	0/1:2,8:10:56.07:260,0,56	1/1:0,13:13:30.09:371,30,0	1/1:1,11:12:30.09:370,30,0	1/1:0,4:4:12.04:148,12,0	1/1:0,6:6:9.03:111,9,0	1/1:1,7:7:18.05:220,18,0	0/1:1,7:8:25.06:167,0,25	1/1:2,1:3:3:26,3,0	1/1:1,5:6:9.03:108,9,0	1/1:7,5:7:15.05:185,15,0	0/1:2,16:18:0.83:438,0,1	1/1:2,2:2:3.01:37,3,0	1/1:0,12:12:30.09:366,30,0	0/1:4,7:11:64.61:164,0,65	1/1:0,4:4:12.04:148,12,0	1/1:1,9:9:27.08:332,27,0	0/1:1,7:8:19.05:235,0,19	0/1:6,5:10:67.34:130,0,67	1/1:1,3:4:9.03:111,9,0
chr10	44331515	.	GTCTGTCTA	G	1662.55	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=2.897;DP=447;FS=2.273;HRun=0;HaplotypeScore=125.3664;InbreedingCoeff=0.4393;MQ=54.14;MQ0=22;MQRankSum=-6.495;QD=7.49;ReadPosRankSum=-0.268;VQSLOD=2.5509;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:13:17.84:129,18,0	0/0:11,0:11:32.94:0,33,269	0/0:20,0:9:7.62:0,8,114	0/0:16,0:9:23.88:0,24,204	1/1:1,31:32:5.85:88,6,0	0/1:11,0:11:34.79:35,0,123	0/0:14,0:13:26.98:0,27,228	0/0:32,0:25:47.60:0,48,412	0/1:12,0:12:83.37:83,0,124	0/1:23,0:21:47.74:48,0,283	0/0:29,0:29:9.66:0,10,273	0/0:12,0:12:29.94:0,30,247	0/0:10,0:10:26.52:0,27,206	0/0:7,0:7:15:0,15,133	0/1:8,0:8:27.26:27,0,63	0/0:8,0:8:23.97:0,24,201	0/0:11,0:11:23.68:0,24,194	0/1:10,0:9:5.03:5,0,158	1/1:19,0:14:35.63:266,36,0	1/1:2,0:23:8.95:193,9,0	0/1:11,0:8:30.99:31,0,43	0/0:23,0:23:46.95:0,47,527	0/0:19,0:19:38.95:0,39,346	0/1:8,0:8:7.03:7,0,127	0/0:13,0:13:35.95:0,36,298	1/1:27,0:26:77.61:620,78,0	1/1:16,0:16:29.74:239,30,0	1/1:7,0:5:11.89:85,12,0
chr10	44331519	.	GTCTATCTATCTATCTA	G	678.37	PASS	AB=1.000;AC=12;AF=0.286;AN=42;BaseQRankSum=2.890;DP=441;FS=25.917;HRun=0;HaplotypeScore=180.5041;InbreedingCoeff=0.4587;MQ=53.68;MQ0=23;MQRankSum=0.060;QD=6.11;ReadPosRankSum=-0.929;VQSLOD=1.1952;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:15:9.03:0,9,198	1/1:11,0:11:2.88:15,3,0	./.	./.	0/0:32,0:32:3.01:0,3,67	0/0:6,0:10:3.01:0,3,48	./.	./.	0/0:7,0:12:6.02:0,6,98	1/1:13,9:20:18.84:482,19,0	1/1:19,8:27:3.01:106,3,0	0/0:11,0:12:6:0,6,154	0/0:9,0:10:6.02:0,6,212	0/0:2,0:6:6.02:0,6,230	1/1:5,0:7:3.01:112,3,0	./.	0/1:10,0:10:0:0,0,0	0/1:10,0:9:25.45:25,0,33	./.	1/1:24,0:23:8.81:69,9,0	0/0:11,0:8:6.02:0,6,287	0/0:21,0:22:12.04:0,12,372	0/0:13,0:19:6.02:0,6,247	0/0:9,0:9:15.05:0,15,387	./.	0/0:30,0:29:26.94:0,27,356	0/0:17,0:17:12.04:0,12,259	0/0:9,0:6:2.94:0,3,18
chr10	44334086	.	GATATATATAT	G	2381.07	PASS	AB=0.773;AC=27;AF=0.643;AN=42;BaseQRankSum=1.615;DP=237;FS=12.357;HRun=0;HaplotypeScore=97.2445;InbreedingCoeff=0.4122;MQ=45.33;MQ0=8;MQRankSum=-2.678;QD=15.36;ReadPosRankSum=1.320;VQSLOD=1.3302;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:8,9:18:0:0,0,0	1/1:4,5:9:3.01:40,3,0	./.	./.	1/1:10,3:13:4.55:208,5,0	0/0:5,0:5:9.03:0,9,400	./.	1/1:11,0:8:11.99:164,12,0	0/0:5,0:5:9.02:0,9,296	1/1:11,0:15:15.81:353,16,0	./.	0/0:5,0:5:3:0,3,25	0/0:4,0:6:8.85:0,9,48	0/1:4,0:5:4.23:15,0,4	1/1:5,0:8:8.60:81,9,0	0/1:4,0:6:7.17:7,0,7	1/1:7,2:9:5.98:86,6,0	1/1:5,0:6:7.73:85,8,0	1/1:2,6:6:17.94:294,18,0	0/1:9,4:14:18.94:19,0,19	./.	./.	0/0:2,0:3:2.04:0,2,6	./.	1/1:12,0:14:0.01:36,0,0	1/1:9,2:10:19.30:359,19,0	1/1:15,3:18:30.05:567,30,0	1/1:6,1:7:9.03:203,9,0
chr10	44334119	.	GTA	G	607.67	PASS	AB=0.917;AC=15;AF=0.469;AN=32;BaseQRankSum=1.515;DP=231;FS=6.642;HRun=0;HaplotypeScore=75.0614;InbreedingCoeff=0.3013;MQ=37.56;MQ0=7;MQRankSum=-0.286;QD=6.40;ReadPosRankSum=-0.424;VQSLOD=2.2690;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:2.84:0,3,14	1/1:0,7:7:3.01:38,3,0	./.	0/0:20,0:2:1.25:0,1,3	0/0:9,0:9:0:0,0,0	0/0:9,0:9:15.52:0,16,236	./.	0/1:5,0:14:42.27:42,0,121	0/0:7,0:6:15.05:0,15,251	1/1:8,7:14:24.07:294,24,0	1/1:7,6:13:3.01:37,3,0	./.	1/1:3,3:6:9:98,9,0	1/1:3,2:5:12.03:138,12,0	./.	./.	1/1:3,5:8:2.80:38,3,0	0/1:2,1:3:16.50:32,0,16	0/0:3,0:3:3.62:0,4,11	./.	./.	./.	./.	./.	./.	0/0:8,0:7:3.21:0,3,20	0/1:18,0:18:6.58:9,0,7	./.
chr10	44334129	.	A	ATG	691.69	PASS	AB=0.916;AC=21;AF=0.457;AN=46;BaseQRankSum=0.732;DP=270;FS=0.000;HRun=0;HaplotypeScore=66.6566;InbreedingCoeff=0.4134;MQ=35.45;MQ0=15;MQRankSum=-0.655;QD=5.67;ReadPosRankSum=0.206;VQSLOD=2.6816;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:2.82:0,3,27	1/1:7,0:7:0.47:1,0,0	./.	0/0:23,0:2:3.01:0,3,34	0/1:9,0:9:0:0,0,0	0/0:9,0:9:14.73:0,15,228	0/0:3,0:2:5.99:0,6,50	0/1:22,0:14:35.24:186,0,35	0/0:6,0:5:15.05:0,15,229	1/1:11,3:10:24.36:268,24,0	1/1:9,1:10:3.01:52,3,0	1/1:3,0:2:2.99:24,3,0	0/1:5,3:9:12.74:53,0,13	1/1:4,2:6:12.01:175,12,0	./.	0/1:10,0:8:0:0,0,0	1/1:9,0:9:2.97:20,3,0	1/1:4,0:3:5.87:36,6,0	0/0:6,0:6:14.78:0,15,100	0/0:14,0:14:0:0,0,0	./.	./.	./.	1/1:3,0:3:2.68:11,3,0	0/1:14,2:12:0:0,0,0	0/0:10,0:8:8.86:0,9,57	0/0:17,0:17:14.88:0,15,126	0/0:4,0:3:2.96:0,3,19
chr10	44334139	.	ATG	A	556.85	PASS	AB=0.854;AC=21;AF=0.438;AN=48;BaseQRankSum=4.444;DP=293;FS=7.619;HRun=0;HaplotypeScore=67.2102;InbreedingCoeff=0.2674;MQ=36.33;MQ0=23;MQRankSum=-1.181;QD=3.37;ReadPosRankSum=0.801;VQSLOD=0.5007;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:9,2:11:2.89:4,0,3	0/0:7,0:7:2.96:0,3,19	./.	0/1:23,0:2:3.93:4,0,39	0/0:6,3:9:0:0,0,0	0/0:9,0:9:15.47:0,15,196	0/0:3,0:2:6.02:0,6,111	0/1:17,1:10:14.78:15,0,75	0/0:6,0:5:15.03:0,15,209	1/1:16,0:10:23.65:152,24,0	1/1:11,0:11:7.82:65,8,0	1/1:2,1:2:2.04:6,2,0	0/0:10,0:10:3.85:0,4,25	1/1:8,0:7:9.89:86,10,0	1/1:7,0:6:1.41:4,1,0	1/1:11,0:9:0.24:1,0,0	0/0:9,0:8:2.84:0,3,21	0/1:5,1:5:4.01:6,0,4	0/1:4,2:5:11.25:63,0,11	0/1:11,5:15:0.02:0,0,0	0/0:10,0:8:2.84:0,3,14	./.	./.	0/0:5,0:5:1.82:0,2,5	./.	0/1:7,2:7:5.55:61,0,6	1/1:17,3:20:10.82:221,11,0	0/0:5,1:3:0.47:0,0,1
chr10	44334140	.	TGTACACAC	T	948.51	PASS	AB=0.920;AC=19;AF=0.380;AN=50;BaseQRankSum=3.595;DP=298;FS=2.086;HRun=0;HaplotypeScore=75.9237;InbreedingCoeff=0.3259;MQ=36.36;MQ0=25;MQRankSum=-3.708;QD=5.97;ReadPosRankSum=-0.364;VQSLOD=1.3841;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:10,0:10:5.94:138,6,0	0/0:7,0:7:3.01:0,3,65	./.	0/1:22,0:2:3.98:4,0,39	0/0:4,4:9:0:0,0,0	0/0:10,0:9:15.92:0,16,325	0/0:3,0:2:6.02:0,6,176	0/1:17,0:10:35.08:35,0,66	0/0:6,0:5:15.05:0,15,378	0/1:16,0:10:26.38:26,0,250	0/0:12,0:12:12.04:0,12,276	0/0:3,0:2:3.01:0,3,73	0/0:10,0:10:5.70:0,6,90	0/0:8,0:7:8.39:0,8,192	0/0:7,0:6:6.02:0,6,152	0/0:11,0:9:2.83:0,3,86	0/0:9,0:8:3.35:0,3,55	0/1:7,0:5:2.81:3,0,157	1/1:6,0:5:5.49:103,5,0	0/1:7,9:15:0:0,0,0	1/1:10,0:8:3.01:46,3,0	./.	./.	0/0:5,0:5:2.99:0,3,83	1/1:18,0:14:0.47:1,0,0	1/1:4,0:7:10.52:166,11,0	1/1:5,14:20:27.76:521,28,0	1/1:6,0:3:3.01:48,3,0
chr10	44334142	.	T	TATAC	1106.48	PASS	AB=0.963;AC=25;AF=0.500;AN=50;BaseQRankSum=0.158;DP=314;FS=0.942;HRun=0;HaplotypeScore=74.4152;InbreedingCoeff=0.3523;MQ=36.24;MQ0=28;MQRankSum=-1.916;QD=5.65;ReadPosRankSum=-1.867;VQSLOD=1.3797;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:9:4.17:0,4,18	0/0:5,0:6:2.96:0,3,19	./.	0/1:21,0:2:3.96:4,0,17	0/1:9,0:9:0:0,0,0	0/0:10,0:9:13.96:0,14,171	0/0:3,0:2:6.02:0,6,117	1/1:21,0:13:26.99:160,27,0	0/0:7,0:6:15.01:0,15,185	1/1:17,0:11:26.79:322,27,0	1/1:14,0:13:10.33:124,10,0	1/1:3,0:2:3.01:74,3,0	0/1:10,0:10:10:27,0,10	1/1:8,0:7:11.97:191,12,0	1/1:8,0:7:5.91:92,6,0	1/1:12,0:10:5.68:50,6,0	0/1:9,0:8:14.33:14,0,18	1/1:8,0:6:8.98:107,9,0	0/1:9,0:7:0.72:34,0,1	0/0:15,0:15:0:0,0,0	0/0:9,0:8:1.55:0,2,4	./.	./.	1/1:6,0:5:2.53:49,3,0	0/1:13,6:16:0:0,0,0	0/0:9,0:7:3.62:0,4,21	0/1:20,0:20:3.86:4,0,65	0/0:6,0:3:2.50:0,2,9
chr10	44334192	.	CATAT	C	436.03	PASS	AC=2;AF=0.037;AN=54;BaseQRankSum=3.784;DP=399;FS=1.081;HRun=0;HaplotypeScore=70.4437;InbreedingCoeff=0.5550;MQ=46.11;MQ0=21;MQRankSum=-0.405;QD=20.76;ReadPosRankSum=1.059;VQSLOD=2.8440;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:14:11.47:0,11,150	0/0:8,0:7:15.05:0,15,274	0/0:4,0:1:3.01:0,3,36	./.	0/0:18,0:18:30.10:0,30,488	0/0:11,0:11:21.07:0,21,344	0/0:8,0:7:15.05:0,15,245	1/1:9,12:19:35.86:530,36,0	0/0:12,0:12:24.08:0,24,393	0/0:14,0:10:25.93:0,26,363	0/0:22,0:21:42.14:0,42,790	0/0:9,0:9:18.06:0,18,324	0/0:11,0:10:9.03:0,9,174	0/0:8,0:8:17.42:0,17,251	0/0:12,0:12:27.56:0,28,482	0/0:10,0:9:15.05:0,15,292	0/0:8,0:8:18.06:0,18,263	0/0:9,0:7:12.04:0,12,235	0/0:13,0:13:29.69:0,30,352	0/0:27,0:26:17.76:0,18,299	0/0:14,0:14:18.52:0,19,272	0/0:14,0:12:9.03:0,9,149	0/0:19,0:18:18.06:0,18,298	0/0:10,0:9:8.56:0,9,172	0/0:23,0:19:27.09:0,27,476	0/0:26,0:20:38.09:0,38,690	0/0:39,0:38:55.36:0,55,886	0/0:11,0:10:1.40:0,1,289
chr10	44335366	.	A	AG	4440.63	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=15.879;DP=602;FS=1.752;HRun=1;HaplotypeScore=96.5658;InbreedingCoeff=0.9864;MQ=56.06;MQ0=3;MQRankSum=-14.565;QD=33.14;ReadPosRankSum=-1.020;VQSLOD=4.3583;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:93.22:0,93,1185	1/1:1,6:7:18.06:260,18,0	0/0:16,0:13:30.10:0,30,384	0/0:23,0:16:44.62:0,45,531	0/0:34,0:34:96.31:0,96,1246	0/0:26,0:26:69.22:0,69,896	0/0:19,0:19:52.40:0,52,650	0/0:26,0:24:69.20:0,69,880	0/0:19,0:19:29.30:0,29,636	1/1:1,20:20:60.16:870,60,0	1/1:2,33:35:81.01:1090,81,0	0/0:15,0:15:9.22:0,9,366	0/0:20,0:20:30.32:0,30,638	0/0:22,0:22:19.80:0,20,644	1/1:2,12:14:33.06:467,33,0	1/1:1,15:14:36.08:513,36,0	1/1:2,13:15:27:360,27,0	1/1:1,7:8:18.03:241,18,0	0/0:23,0:21:63.20:0,63,808	0/0:32,0:32:93.29:0,93,1193	0/0:22,0:22:63.19:0,63,803	0/0:30,0:30:90.29:0,90,1168	0/0:31,0:31:87.25:0,87,1098	0/0:11,0:11:30.10:0,30,389	1/1:1,17:18:45.11:640,45,0	0/0:27,0:27:75.24:0,75,974	0/0:25,0:25:75.21:0,75,930	0/0:11,0:11:33.11:0,33,428
chr10	44335367	.	G	GA	2219.75	PASS	AB=0.875;AC=18;AF=0.321;AN=56;BaseQRankSum=15.613;DP=609;FS=1.306;HRun=2;HaplotypeScore=104.3201;InbreedingCoeff=0.8171;MQ=56.23;MQ0=2;MQRankSum=-14.148;QD=12.98;ReadPosRankSum=0.178;VQSLOD=2.5303;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,3:39:90.29:0,90,1168	1/1:7,0:7:17.94:148,18,0	0/0:16,0:13:33.07:0,33,394	0/0:23,0:16:44.02:0,44,530	0/0:33,0:33:99:0,99,1269	0/0:27,0:27:72.22:0,72,920	0/0:18,0:18:52.98:0,53,666	0/0:26,0:25:66.21:0,66,857	0/0:17,2:19:9.36:0,9,617	1/1:21,0:20:56.88:462,57,0	1/1:33,0:33:68.41:604,68,0	0/1:12,3:15:11.73:12,0,356	0/0:18,3:21:9.38:0,9,617	0/1:20,2:22:22.95:23,0,605	1/1:15,1:16:13.54:243,14,0	1/1:15,1:14:32.93:276,33,0	1/1:13,2:15:22.67:183,23,0	1/1:7,0:7:14.97:121,15,0	0/0:24,0:22:63.20:0,63,806	0/0:32,0:32:93.30:0,93,1207	0/0:23,0:23:60.18:0,60,763	0/0:30,0:30:90.29:0,90,1168	0/0:31,0:31:87.26:0,87,1113	0/0:11,0:11:30.10:0,30,388	1/1:19,0:19:41.96:355,42,0	0/0:28,0:28:75.24:0,75,974	0/0:26,0:26:69.22:0,69,894	0/0:11,0:11:33.11:0,33,429
chr10	44335660	.	GT	G	10498.38	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-6.314;DP=516;FS=5.988;HRun=9;HaplotypeScore=57.1683;InbreedingCoeff=0.9807;MQ=60.95;MQ0=2;MQRankSum=4.299;QD=22.82;ReadPosRankSum=5.048;VQSLOD=5.4730;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,20:21:51.03:467,51,0	1/1:1,8:9:24.01:220,24,0	0/0:16,0:10:17.97:0,18,190	0/0:19,0:13:23.32:0,23,234	1/1:2,25:27:69.03:631,69,0	1/1:3,21:24:60.03:549,60,0	1/1:0,8:8:24.01:220,24,0	0/0:5,0:19:36.70:0,37,200	1/1:2,4:6:12:110,12,0	1/1:4,15:19:45.01:411,45,0	1/1:2,23:25:66.03:603,66,0	1/1:3,13:16:39.01:357,39,0	1/1:0,10:10:21.01:192,21,0	1/1:1,12:13:30.01:275,30,0	1/1:3,16:19:48.03:439,48,0	1/1:4,12:16:38.98:350,39,0	1/1:1,15:16:39.01:357,39,0	1/1:5,15:20:22.05:329,22,0	1/1:3,18:20:51.02:467,51,0	1/1:4,27:31:40.41:624,40,0	1/1:1,20:21:60.03:549,60,0	1/1:2,21:23:63.03:577,63,0	1/1:1,25:26:69.03:631,69,0	1/1:0,20:20:60.03:549,60,0	1/1:1,22:23:63.03:576,63,0	1/1:2,12:14:36.02:330,36,0	1/1:1,18:19:42.02:384,42,0	1/1:2,11:13:33.02:302,33,0
chr10	44336154	.	G	GT	5959.38	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-4.298;DP=280;FS=38.427;HRun=3;HaplotypeScore=60.2057;InbreedingCoeff=0.8450;MQ=59.78;MQ0=8;MQRankSum=-4.775;QD=29.65;ReadPosRankSum=2.046;VQSLOD=2.4361;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,7:8:19.78:284,20,0	1/1:0,6:6:15.05:203,15,0	0/0:25,0:15:41.60:0,42,454	0/0:20,0:14:35.84:0,36,405	1/1:3,18:21:45.68:539,46,0	0/0:14,0:13:36.11:0,36,424	0/0:10,0:10:30.08:0,30,351	1/1:1,12:11:30.10:420,30,0	0/0:10,0:10:21.06:0,21,252	1/1:0,7:6:18.05:237,18,0	1/1:0,15:14:27.09:360,27,0	1/1:1,3:4:10.85:131,11,0	1/1:1,3:4:2.11:116,2,0	1/1:0,9:9:27.09:377,27,0	1/1:0,5:2:6.02:84,6,0	1/1:0,3:3:9.03:126,9,0	1/1:0,14:13:33.11:461,33,0	1/1:0,7:7:18.06:247,18,0	1/1:1,7:8:21.04:272,21,0	1/1:2,11:10:16.64:287,17,0	1/1:2,6:8:11.07:131,11,0	1/1:3,9:12:19.72:329,20,0	1/1:0,10:9:21.07:286,21,0	1/1:2,3:5:9.03:118,9,0	1/1:0,4:3:9.03:119,9,0	1/1:0,12:12:30.10:416,30,0	1/1:2,8:10:20.84:332,21,0	1/1:0,2:2:6.02:84,6,0
chr10	44337192	.	TC	T	11814.58	PASS	AB=0.524;AC=27;AF=0.482;AN=56;BaseQRankSum=13.282;DP=651;FS=0.291;HRun=1;HaplotypeScore=64.9508;InbreedingCoeff=0.9282;MQ=60.88;MQ0=1;MQRankSum=1.978;QD=36.02;ReadPosRankSum=2.159;VQSLOD=5.1631;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,34:33:93.15:1212,93,0	0/0:9,0:9:27.08:0,27,392	0/0:25,0:17:50.93:0,51,684	0/0:22,1:18:39.19:0,39,670	1/1:0,33:33:93.04:1149,93,0	0/0:15,0:15:45.12:0,45,641	0/0:14,0:14:39.11:0,39,566	0/0:28,0:28:84.27:0,84,1249	0/0:25,0:25:75.24:0,75,1127	0/0:34,0:34:99:0,102,1518	0/0:32,0:32:96.22:0,96,1398	1/1:0,11:11:30.10:419,30,0	1/1:0,23:23:51.17:707,51,0	1/1:0,19:19:57.19:797,57,0	0/0:18,0:18:54.17:0,54,802	0/0:19,0:19:57.19:0,57,871	0/0:34,0:34:99:0,102,1557	0/0:23,0:23:69.16:0,69,974	1/1:1,19:18:54.15:719,54,0	1/1:0,32:32:96.18:1256,96,0	1/1:0,16:16:45.15:629,45,0	1/1:0,30:30:83.86:1098,84,0	1/1:0,29:29:69.19:943,69,0	1/1:0,11:11:30.10:419,30,0	0/0:24,0:24:72.24:0,72,1101	0/1:3,30:33:38.59:1125,0,39	1/1:0,21:21:51.17:713,51,0	1/1:0,16:16:45.15:629,45,0
chr10	44339655	.	A	AT	197.26	PASS	AB=1.000;AC=5;AF=0.093;AN=54;BaseQRankSum=-1.027;DP=281;FS=3.006;HRun=7;HaplotypeScore=30.0807;InbreedingCoeff=0.6505;MQ=62.12;MQ0=3;MQRankSum=1.665;QD=14.09;ReadPosRankSum=1.278;VQSLOD=2.0432;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:39.02:0,39,368	1/1:0,7:7:18.06:217,18,0	0/0:9,0:6:15.01:0,15,141	0/0:6,0:3:6:0,6,54	0/0:17,0:17:45.07:0,45,435	0/0:8,0:8:24.04:0,24,232	0/0:7,0:7:15.02:0,15,145	0/0:15,0:14:30.04:0,30,289	0/0:14,0:14:30.04:0,30,290	0/0:21,0:21:57.08:0,57,547	0/0:19,0:19:51.06:0,51,487	0/0:8,0:8:21.03:0,21,203	0/0:7,0:7:21.03:0,21,203	0/0:9,0:9:24.04:0,24,232	0/0:8,0:8:21.03:0,21,203	0/0:10,0:10:27.04:0,27,261	1/1:1,2:3:6.02:72,6,0	0/0:7,0:7:21.03:0,21,203	0/0:14,0:12:21.01:0,21,197	0/0:13,0:13:36.06:0,36,348	0/0:6,0:6:12.01:0,12,116	0/0:12,0:12:30.03:0,30,290	0/0:8,0:8:21.03:0,21,203	0/1:4,0:4:20.12:25,0,20	0/0:11,0:11:33.03:0,33,312	0/0:15,1:16:11.84:0,12,398	0/0:7,0:7:21.03:0,21,203	./.
chr10	44345507	.	CG	C	1336.42	PASS	AB=1.000;AC=14;AF=0.875;AN=16;BaseQRankSum=-1.702;DP=112;FS=9.436;HRun=1;HaplotypeScore=66.8232;MQ=121.28;MQ0=10;MQRankSum=-3.774;QD=12.97;ReadPosRankSum=4.144;VQSLOD=1.8940;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/1:38,0:13:18.74:19,0,200	0/1:28,0:16:70.30:70,0,175	1/1:0,2:2:6.02:78,6,0	./.	./.	./.	./.	./.	1/1:0,5:5:12.04:167,12,0	./.	./.	./.	./.	./.	./.	./.	./.	1/1:0,17:17:48.16:669,48,0	./.	1/1:0,2:2:6.02:84,6,0	1/1:0,4:4:12.04:167,12,0	./.	1/1:1,4:4:12.04:167,12,0	./.	./.	./.
chr10	44345509	.	AG	A	420.69	PASS	AB=0.818;AC=15;AF=0.938;AN=16;BaseQRankSum=0.697;DP=113;FS=23.296;HRun=3;HaplotypeScore=75.2966;MQ=110.93;MQ0=12;MQRankSum=-2.701;QD=4.25;ReadPosRankSum=2.853;VQSLOD=-0.7401;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	./.	1/1:14,19:11:3.59:159,4,0	0/1:21,6:15:99:147,0,116	1/1:2,0:2:3.62:10,4,0	./.	./.	./.	./.	./.	1/1:7,0:7:8.85:28,9,0	./.	./.	./.	./.	./.	./.	./.	./.	1/1:18,0:17:31.82:92,32,0	./.	1/1:2,0:2:4.74:16,5,0	1/1:4,0:4:8.03:24,8,0	./.	1/1:6,0:5:7.93:23,8,0	./.	./.	./.
chr10	44345596	.	G	GT	406.12	PASS	AC=20;AF=0.909;AN=22;BaseQRankSum=1.609;DP=114;FS=0.000;HRun=3;HaplotypeScore=21.6141;InbreedingCoeff=0.2609;MQ=18.55;MQ0=39;MQRankSum=1.609;QD=9.02;ReadPosRankSum=1.362;VQSLOD=0.9106;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:34,0:2:3.01:0,3,31	./.	1/1:1,6:7:8.58:44,9,0	./.	./.	./.	./.	1/1:2,4:4:11.98:101,12,0	1/1:2,8:9:23.28:132,23,0	./.	./.	1/1:0,1:1:2.90:16,3,0	./.	./.	./.	1/1:1,1:1:2.98:21,3,0	./.	1/1:1,2:3:2.92:17,3,0	./.	1/1:2,4:6:5.78:31,6,0	1/1:0,4:4:5.80:32,6,0	./.	1/1:1,3:4:8.77:51,9,0	1/1:0,2:2:5.96:45,6,0	./.	./.
chr10	44345601	.	TC	T	476.84	PASS	AB=1.000;AC=25;AF=0.962;AN=26;BaseQRankSum=1.924;DP=111;FS=0.000;HRun=2;HaplotypeScore=21.5708;InbreedingCoeff=-0.0693;MQ=30.22;MQ0=38;MQRankSum=-0.113;QD=5.89;ReadPosRankSum=1.999;VQSLOD=0.7292;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/1:37,0:4:8.73:9,0,59	./.	1/1:0,6:6:8.15:35,8,0	./.	./.	./.	./.	1/1:2,4:4:11.88:85,12,0	1/1:0,8:8:19.58:92,20,0	./.	./.	1/1:0,1:1:2.97:20,3,0	1/1:0,2:1:3.01:39,3,0	./.	./.	1/1:1,1:1:2.94:18,3,0	./.	1/1:0,3:3:5.85:53,6,0	./.	1/1:0,5:5:8.55:64,9,0	1/1:0,4:4:5.59:26,6,0	./.	1/1:0,3:3:8.52:42,9,0	1/1:0,2:2:5.91:39,6,0	1/1:0,2:1:3.01:39,3,0	./.
chr10	44349264	.	C	CATCT	17411.80	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=3.936;DP=602;FS=2.877;HRun=0;HaplotypeScore=141.2459;InbreedingCoeff=0.9976;MQ=84.63;MQ0=0;MQRankSum=-13.980;QD=52.60;ReadPosRankSum=2.548;VQSLOD=6.2280;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,29:39:81.28:2123,81,0	1/1:1,11:12:33.11:870,33,0	0/0:30,0:30:81.26:0,81,1398	0/0:22,0:22:45.13:0,45,780	1/1:4,23:26:33.11:864,33,0	0/0:16,0:16:48.16:0,48,868	0/0:27,0:27:72.23:0,72,1295	0/0:44,0:44:99:0,117,2088	0/0:23,0:23:63.22:0,63,1143	0/0:17,0:17:48.15:0,48,827	0/0:16,0:16:48.15:0,48,838	1/1:6,13:20:39.13:1008,39,0	1/1:5,15:20:48.16:1258,48,0	1/1:0,8:9:21.07:554,21,0	0/0:25,0:25:66.23:0,66,1214	0/0:12,0:12:33.10:0,33,577	1/1:2,20:23:44.62:1182,45,0	0/0:23,0:23:57.20:0,57,1033	1/1:6,14:20:51.16:1235,51,0	1/1:3,19:23:54.19:1419,54,0	1/1:6,10:16:23.90:622,24,0	1/1:5,7:15:18.06:474,18,0	1/1:1,13:13:27.09:707,27,0	1/1:1,15:16:30.10:790,30,0	0/0:16,0:16:42.12:0,42,740	1/1:5,16:21:51.17:1303,51,0	1/1:11,30:41:81.28:2131,81,0	1/1:3,11:15:33.11:870,33,0
chr10	44352533	.	GGA	G	924.38	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.735;DP=517;FS=12.804;HRun=0;HaplotypeScore=59.4484;InbreedingCoeff=0.9956;MQ=75.41;MQ0=0;MQRankSum=-2.713;QD=31.88;ReadPosRankSum=1.712;VQSLOD=5.0135;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:42.14:0,42,756	1/1:0,8:8:24.08:331,24,0	0/0:22,0:23:60.18:0,60,1005	0/0:11,0:10:27.09:0,27,451	0/0:30,0:30:87.30:0,87,1542	0/0:18,0:18:54.19:0,54,967	0/0:13,0:13:39.12:0,39,672	0/0:32,0:32:93.31:0,93,1638	0/0:24,0:24:72.25:0,72,1269	0/0:24,0:24:66.23:0,66,1187	0/0:17,0:17:45.15:0,45,799	0/0:10,0:10:30.10:0,30,521	0/0:21,0:21:54.18:0,54,952	0/0:12,0:12:36.11:0,36,619	0/0:19,0:19:48.16:0,48,856	0/0:9,0:9:21.07:0,21,366	1/1:2,19:21:51.17:714,51,0	0/0:13,0:13:39.13:0,39,702	0/0:19,0:19:54.17:0,54,902	0/0:23,0:23:66.23:0,66,1178	0/0:18,0:18:42.14:0,42,738	0/0:13,0:13:33.11:0,33,583	0/0:22,0:22:66.23:0,66,1174	0/0:11,0:11:33.11:0,33,594	0/0:26,0:26:78.27:0,78,1382	0/0:28,0:28:81.28:0,81,1450	0/0:24,0:23:66.20:0,66,1149	0/0:13,0:13:39.13:0,39,702
chr10	44352981	.	CT	C	1162.56	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=1.703;DP=713;FS=1.475;HRun=1;HaplotypeScore=83.7693;InbreedingCoeff=0.9994;MQ=67.82;MQ0=0;MQRankSum=-0.378;QD=38.75;ReadPosRankSum=-4.169;VQSLOD=2.4869;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,99,1557	0/0:10,0:10:30.08:0,30,453	0/0:22,0:22:60.19:0,60,920	0/0:20,0:20:57.19:0,57,909	0/0:35,0:35:99:0,105,1674	0/0:21,0:21:63.20:0,63,984	0/0:30,0:30:90.31:0,90,1439	1/1:0,30:30:90.30:1257,90,0	0/0:25,0:25:75.26:0,75,1197	0/0:45,0:45:99:0,135,2108	0/0:22,0:22:66.23:0,66,1055	0/0:22,0:22:66.21:0,66,1032	0/0:24,0:24:72.23:0,72,1128	0/0:22,0:22:66.22:0,66,1049	0/0:21,0:21:63.20:0,63,984	0/0:18,0:18:54.18:0,54,864	0/0:31,0:31:93.32:0,93,1487	0/0:13,0:13:36.08:0,36,547	0/0:21,0:21:60.15:0,60,909	0/0:35,0:35:99:0,105,1675	0/0:24,0:24:72.25:0,72,1148	0/0:28,0:28:84.26:0,84,1297	0/0:26,0:26:78.27:0,78,1247	0/0:25,0:25:75.22:0,75,1150	0/0:21,0:21:63.21:0,63,1007	0/0:26,0:26:78.26:0,78,1226	0/0:42,0:42:99:0,120,1913	0/0:20,0:20:60.20:0,60,959
chr10	44353823	.	AACACAC	A	3052.70	PASS	AB=0.593;AC=15;AF=0.268;AN=56;BaseQRankSum=3.788;DP=604;FS=15.486;HRun=0;HaplotypeScore=156.3143;InbreedingCoeff=0.7667;MQ=47.61;MQ0=15;MQRankSum=-3.835;QD=23.13;ReadPosRankSum=1.784;VQSLOD=2.4832;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:19:3.01:0,3,78	1/1:5,1:7:6.02:109,6,0	0/0:47,0:18:9.03:0,9,147	0/0:44,0:11:6.91:0,7,181	0/0:18,0:20:2.04:0,2,6	0/0:24,0:24:51.18:0,51,1594	0/0:17,0:19:36.11:0,36,987	0/0:30,0:29:42.11:0,42,1020	0/0:12,0:15:29.83:0,30,892	1/1:19,8:28:39:652,39,0	1/1:5,13:18:34:686,34,0	0/0:1,0:14:15.05:0,15,390	0/0:3,0:16:12.04:0,12,310	0/0:5,0:22:24.08:0,24,616	1/1:4,6:11:12.04:249,12,0	0/1:5,9:16:71.23:450,0,71	1/1:11,5:16:15.05:311,15,0	1/1:3,3:7:11.78:230,12,0	0/0:14,0:14:21.07:0,21,625	0/0:23,0:24:14.60:0,15,382	0/0:5,0:27:9.50:0,10,233	0/0:5,0:20:11.60:0,12,310	0/0:2,0:21:14.06:0,14,388	0/0:2,0:23:15.05:0,15,388	1/1:11,8:24:32.18:554,32,0	0/0:26,0:23:48.16:0,48,1360	0/0:23,0:19:21.54:0,22,485	0/0:6,0:12:18.06:0,18,379
chr10	44353857	.	C	CGT	4978.81	PASS	AB=1.000;AC=31;AF=0.574;AN=54;BaseQRankSum=1.932;DP=628;FS=3.231;HRun=0;HaplotypeScore=138.3259;InbreedingCoeff=0.8534;MQ=51.55;MQ0=21;MQRankSum=-3.033;QD=16.27;ReadPosRankSum=1.639;VQSLOD=4.7133;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,1:22:0.35:61,0,0	1/1:3,0:3:8.95:87,9,0	0/0:52,0:11:17.84:0,18,169	0/0:62,0:19:21.82:0,22,230	./.	0/0:20,0:20:47.93:0,48,548	0/0:29,0:29:61.67:0,62,730	1/1:13,9:22:27.08:385,27,0	0/0:23,0:23:51.12:0,51,584	1/1:24,0:23:59.88:693,60,0	1/1:25,0:24:46.31:396,46,0	0/0:15,0:15:20.05:0,20,160	0/0:16,0:15:31.18:0,31,290	0/0:18,0:17:34.18:0,34,318	1/1:18,0:16:35.92:439,36,0	0/1:15,0:15:2.67:219,0,3	1/1:7,10:16:17.76:130,18,0	1/1:7,1:8:21.02:243,21,0	1/1:7,0:9:0.24:200,0,0	1/1:6,20:29:8.94:120,9,0	1/1:16,1:17:18.04:245,18,0	0/0:26,0:25:46.80:0,47,488	0/0:22,0:22:29.61:0,30,263	0/0:22,0:20:17.82:0,18,298	1/1:22,0:21:47.41:454,47,0	1/1:10,17:22:27.98:587,28,0	1/1:10,13:21:17.98:201,18,0	1/1:13,2:15:36.58:518,37,0
chr10	44368432	.	GA	G	173.42	PASS	AC=6;AF=0.273;AN=22;BaseQRankSum=-2.625;DP=171;FS=0.000;HRun=2;HaplotypeScore=17.7583;InbreedingCoeff=0.5659;MQ=17.97;MQ0=64;MQRankSum=-1.452;QD=9.63;ReadPosRankSum=0.943;VQSLOD=1.1544;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	0/0:5,0:2:3.01:0,3,45	./.	./.	./.	0/0:18,0:1:3.01:0,3,45	./.	./.	./.	1/1:2,3:2:6.02:78,6,0	1/1:3,3:3:3.01:39,3,0	./.	./.	./.	./.	./.	0/0:17,0:2:3.01:0,3,45	./.	./.	0/0:13,0:7:18.06:0,18,269	./.	0/0:3,0:3:9.03:0,9,135	0/0:10,0:6:12.04:0,12,179	./.	1/1:0,7:7:12.04:155,12,0	0/0:6,0:3:5.66:0,6,83	./.	0/0:5,0:4:12.04:0,12,180
chr10	44371372	.	TA	T	3043.15	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=8.533;DP=245;FS=15.494;HRun=8;HaplotypeScore=43.9962;InbreedingCoeff=0.9094;MQ=68.35;MQ0=2;MQRankSum=-0.370;QD=23.96;ReadPosRankSum=2.545;VQSLOD=2.6690;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,13:13:39.06:377,39,0	0/0:3,0:3:9.03:0,9,109	0/0:12,0:8:24.07:0,24,278	0/0:14,0:9:24.06:0,24,272	1/1:0,14:14:39.06:377,39,0	0/0:7,0:7:15.05:0,15,181	0/0:3,0:3:9.03:0,9,109	0/0:17,0:17:36.11:0,36,435	0/0:6,0:6:18.06:0,18,217	0/0:11,0:11:30.09:0,30,362	0/0:12,0:12:36.11:0,36,435	1/1:0,7:7:18.03:174,18,0	1/1:0,3:3:9.01:87,9,0	1/1:0,4:4:12.02:116,12,0	0/0:6,0:6:18.04:0,18,205	0/0:4,0:4:12.04:0,12,145	0/0:10,0:10:30.09:0,30,360	0/0:2,0:2:6.02:0,6,72	1/1:2,12:14:36.05:348,36,0	1/1:0,17:17:48.08:463,48,0	1/1:0,6:6:15.02:145,15,0	1/1:0,7:7:21.03:202,21,0	1/1:0,6:6:18.03:174,18,0	1/1:1,6:6:18.03:174,18,0	0/0:11,0:11:33.07:0,33,374	1/1:3,13:15:2.82:311,3,0	1/1:0,8:8:24.04:232,24,0	1/1:0,5:5:9.01:87,9,0
chr10	44372117	.	AG	A	5440.87	PASS	AB=0.519;AC=15;AF=0.288;AN=52;BaseQRankSum=10.652;DP=551;FS=1.273;HRun=1;HaplotypeScore=51.8908;InbreedingCoeff=0.9007;MQ=48.53;MQ0=40;MQRankSum=-0.247;QD=30.23;ReadPosRankSum=1.832;VQSLOD=4.5865;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,18:18:36.05:479,36,0	0/0:9,0:8:24.07:0,24,358	./.	./.	1/1:0,25:23:57.15:772,57,0	0/0:21,0:21:51.06:0,51,735	0/0:10,0:7:12:0,12,163	0/0:26,0:9:27.08:0,27,406	0/0:14,0:14:30.10:0,30,479	0/0:27,0:26:78.27:0,78,1243	0/0:27,0:26:69.21:0,69,1052	0/0:13,0:12:24.03:0,24,350	0/0:15,0:15:20.82:0,21,312	0/0:13,0:13:30.06:0,30,409	0/0:17,0:17:39.10:0,39,572	0/0:16,0:16:48.15:0,48,740	0/0:31,0:28:42.14:0,42,667	0/0:24,0:23:42.10:0,42,621	1/1:1,15:14:36.03:458,36,0	1/1:0,33:30:72.17:979,72,0	1/1:1,18:17:39.13:543,39,0	0/0:19,0:17:39.11:0,39,619	0/0:14,0:14:39.13:0,39,621	0/0:17,0:17:36.11:0,36,551	0/0:24,0:23:54.16:0,54,829	0/1:2,26:27:17.64:922,0,18	1/1:1,20:21:51.17:703,51,0	1/1:0,19:19:42.14:586,42,0
chr10	44372390	.	G	GA	6647.11	PASS	AB=1.000;AC=27;AF=0.500;AN=54;BaseQRankSum=13.391;DP=571;FS=10.135;HRun=1;HaplotypeScore=59.8105;InbreedingCoeff=0.8949;MQ=50.82;MQ0=14;MQRankSum=-14.028;QD=26.38;ReadPosRankSum=0.265;VQSLOD=3.4925;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,16:14:30.10:476,30,0	0/0:5,0:5:12.04:0,12,167	0/1:38,0:10:25.98:26,0,189	0/0:34,0:4:9.03:0,9,116	1/1:1,24:17:30.10:478,30,0	0/0:32,0:32:90.29:0,90,1240	0/0:20,0:19:51.17:0,51,713	0/0:24,0:24:69.21:0,69,945	0/0:29,0:29:84.26:0,84,1156	0/0:24,0:24:72.24:0,72,1007	0/0:23,0:22:42.14:0,42,586	1/1:1,7:6:15.05:239,15,0	1/1:0,21:16:45.14:693,45,0	1/1:0,17:13:36.12:574,36,0	0/0:22,0:22:63.21:0,63,881	0/0:25,0:25:75.25:0,75,1049	0/0:39,1:40:57.39:0,57,1358	0/0:19,0:18:45.15:0,45,629	1/1:2,6:7:21.07:335,21,0	1/1:0,16:13:33.11:525,33,0	1/1:0,2:2:6.02:96,6,0	1/1:2,18:15:33.11:526,33,0	1/1:0,14:11:27.09:415,27,0	./.	0/0:22,0:21:57.19:0,57,795	1/1:0,22:18:54.16:837,54,0	1/1:3,31:27:69.24:1093,69,0	1/1:0,10:10:21.07:335,21,0
chr10	44373807	.	T	TA	4979.94	PASS	AB=0.577;AC=26;AF=0.464;AN=56;BaseQRankSum=6.479;DP=480;FS=1.843;HRun=8;HaplotypeScore=64.8273;InbreedingCoeff=0.8550;MQ=50.79;MQ0=4;MQRankSum=-3.148;QD=22.13;ReadPosRankSum=3.271;VQSLOD=5.3431;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,18:19:48.13:544,48,0	0/0:7,0:7:11.99:0,12,110	0/0:17,0:13:32.82:0,33,293	0/0:13,0:7:14.03:0,14,113	1/1:6,24:27:63.14:710,63,0	0/0:18,0:17:30.01:0,30,274	0/0:6,0:6:15:0,15,137	0/0:34,0:34:84.01:0,84,765	0/0:14,0:14:33:0,33,297	0/0:27,0:27:72.04:0,72,659	0/0:31,0:30:59.92:0,60,531	1/1:0,10:9:24.07:277,24,0	0/1:1,13:11:6.38:186,0,6	1/1:1,10:9:8.98:89,9,0	0/0:20,0:20:42:0,42,383	0/0:19,0:19:48.03:0,48,439	0/0:20,0:20:10.83:0,11,326	0/0:12,0:13:10.53:0,11,207	1/1:5,5:8:12.04:139,12,0	1/1:3,25:27:65.94:725,66,0	1/1:6,9:12:24.07:277,24,0	1/1:4,18:20:48.14:553,48,0	1/1:2,9:11:27.08:311,27,0	1/1:0,4:3:9.03:104,9,0	0/0:16,0:16:39.02:0,39,357	0/1:6,8:13:0.36:250,0,0	1/1:5,27:27:63.14:712,63,0	1/1:0,4:4:9.03:104,9,0
chr10	44373882	.	T	TC	4753.73	PASS	AC=46;AF=0.958;AN=48;BaseQRankSum=-1.732;DP=234;FS=0.000;HRun=1;HaplotypeScore=26.7755;InbreedingCoeff=0.2103;MQ=33.58;MQ0=5;MQRankSum=1.701;QD=21.41;ReadPosRankSum=1.576;VQSLOD=4.7208;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,3:4:6.02:89,6,0	1/1:1,1:2:5.99:66,6,0	0/0:5,0:1:2.96:0,3,19	./.	1/1:3,13:12:18.01:242,18,0	1/1:0,14:12:24.08:358,24,0	1/1:0,2:1:3.01:45,3,0	1/1:3,6:8:18.03:245,18,0	1/1:1,7:8:21.07:313,21,0	1/1:1,21:19:48.16:716,48,0	1/1:1,12:12:9.03:134,9,0	1/1:1,5:5:5.98:65,6,0	1/1:2,4:1:3.01:45,3,0	1/1:1,6:4:3.01:45,3,0	1/1:1,16:16:33.11:493,33,0	1/1:4,9:11:15:180,15,0	1/1:0,12:12:27.09:403,27,0	1/1:0,6:6:15.01:199,15,0	1/1:2,3:2:3.01:45,3,0	1/1:1,13:12:21.07:313,21,0	./.	1/1:1,9:8:12.04:179,12,0	1/1:1,4:3:3.01:45,3,0	./.	1/1:0,12:12:21.07:313,21,0	1/1:0,4:2:3.01:45,3,0	1/1:4,10:6:12.04:175,12,0	./.
chr10	44373948	.	T	TC	4735.53	PASS	AC=44;AF=0.917;AN=48;BaseQRankSum=-2.644;DP=178;FS=43.083;HRun=1;HaplotypeScore=32.0979;InbreedingCoeff=0.4820;MQ=41.26;MQ0=13;MQRankSum=-2.072;QD=32.44;ReadPosRankSum=1.918;VQSLOD=2.0334;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,4:4:12.04:179,12,0	1/1:0,1:1:3.01:45,3,0	0/0:19,0:5:14.02:0,14,130	0/0:9,0:3:5.84:0,6,39	1/1:0,8:6:15.05:212,15,0	1/1:2,7:8:18.06:269,18,0	1/1:1,2:2:6.02:90,6,0	1/1:1,16:15:42.14:622,42,0	1/1:1,4:4:12.04:180,12,0	1/1:1,13:10:30.10:439,30,0	1/1:1,5:4:12.04:179,12,0	1/1:0,4:4:12.04:179,12,0	1/1:1,5:5:12.04:172,12,0	1/1:0,3:3:6.02:90,6,0	1/1:2,6:8:21.07:313,21,0	1/1:0,9:8:24.08:359,24,0	1/1:2,4:6:1.18:83,1,0	1/1:0,2:2:6.02:90,6,0	./.	1/1:2,10:12:30.10:448,30,0	./.	1/1:1,3:3:6.02:79,6,0	1/1:2,3:2:3.01:33,3,0	./.	1/1:1,5:6:15.05:224,15,0	1/1:0,2:1:3.01:45,3,0	1/1:1,10:10:27.09:404,27,0	./.
chr10	44374094	.	AGCCCT	A	547.95	PASS	AB=0.917;AC=19;AF=0.679;AN=28;BaseQRankSum=3.662;DP=299;FS=24.167;HRun=0;HaplotypeScore=49.3307;InbreedingCoeff=0.3488;MQ=13.10;MQ0=231;MQRankSum=-0.504;QD=9.29;ReadPosRankSum=2.434;VQSLOD=0.5925;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	1/1:0,2:2:6.02:92,6,0	0/0:24,0:2:6.02:0,6,200	0/0:29,0:4:12.04:0,12,400	1/1:2,2:3:6.02:85,6,0	1/1:3,1:1:3.01:46,3,0	./.	./.	./.	0/1:20,1:8:56.28:56,0,145	1/1:1,0:2:3.01:30,3,0	./.	./.	./.	./.	./.	0/0:32,0:1:3.01:0,3,39	0/0:25,0:1:3.01:0,3,74	./.	./.	./.	1/1:5,2:3:6.02:88,6,0	1/1:4,0:3:3.01:30,3,0	./.	1/1:1,3:3:6.02:94,6,0	1/1:4,1:1:3.01:43,3,0	./.	1/1:2,2:2:6.02:97,6,0
chr10	44374102	.	CGAATTCCTT	C	1036.71	PASS	AB=0.952;AC=19;AF=0.679;AN=28;BaseQRankSum=3.029;DP=296;FS=28.802;HRun=0;HaplotypeScore=39.2372;InbreedingCoeff=0.3487;MQ=12.22;MQ0=240;MQRankSum=-2.463;QD=19.56;ReadPosRankSum=0.538;VQSLOD=0.8616;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	1/1:0,2:2:6.02:149,6,0	0/0:22,0:2:6.02:0,6,304	0/0:28,0:4:12.04:0,12,608	1/1:0,2:2:6.02:142,6,0	1/1:4,1:1:3.01:74,3,0	./.	./.	./.	0/1:19,1:3:99:132,0,121	1/1:1,0:1:3.01:65,3,0	./.	./.	./.	./.	./.	0/0:31,0:1:3.01:0,3,132	0/0:24,0:1:3.01:0,3,36	./.	./.	./.	1/1:4,2:2:6.02:145,6,0	1/1:3,0:1:3.01:65,3,0	./.	1/1:1,3:3:6.02:150,6,0	1/1:5,1:1:3.01:72,3,0	./.	1/1:2,2:2:6.02:153,6,0
chr10	44374159	.	CA	C	1346.93	PASS	AB=0.963;AC=15;AF=0.938;AN=16;BaseQRankSum=-1.473;DP=341;FS=0.000;HRun=3;HaplotypeScore=55.4499;MQ=10.75;MQ0=286;MQRankSum=1.646;QD=12.13;ReadPosRankSum=1.646;VQSLOD=1.8924;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	1/1:6,3:3:9.03:111,9,0	./.	./.	1/1:3,4:4:9.03:111,9,0	./.	./.	./.	./.	0/1:25,1:2:13.92:30,0,14	1/1:1,16:15:39.12:476,39,0	./.	./.	./.	./.	./.	./.	./.	./.	1/1:4,6:6:15.05:183,15,0	./.	1/1:14,1:3:3.01:37,3,0	1/1:8,7:7:21.07:260,21,0	./.	1/1:5,7:8:18.06:218,18,0	./.	./.	./.
chr10	44377285	.	TC	T	5948.81	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=10.828;DP=509;FS=2.546;HRun=3;HaplotypeScore=67.6865;InbreedingCoeff=0.9857;MQ=57.63;MQ0=3;MQRankSum=0.080;QD=33.80;ReadPosRankSum=0.173;VQSLOD=5.2558;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,18:20:48.15:595,48,0	0/0:14,0:14:42.14:0,42,605	0/0:18,0:13:30.05:0,30,370	0/0:9,0:7:17.62:0,18,259	1/1:1,27:28:78.25:967,78,0	0/0:17,0:17:51.17:0,51,734	0/0:6,0:6:15.05:0,15,216	0/0:27,0:27:81.26:0,81,1151	0/0:16,0:16:48.16:0,48,688	0/0:34,0:33:99:0,102,1446	0/0:17,0:16:51.16:0,51,716	0/0:13,0:13:39.12:0,39,543	0/0:12,0:12:33.10:0,33,456	0/0:16,0:16:45.15:0,45,648	0/0:15,0:15:45.15:0,45,647	0/0:16,0:16:42.14:0,42,605	0/0:14,0:14:39.12:0,39,549	0/0:11,0:11:30.10:0,30,432	1/1:1,14:15:39.12:483,39,0	1/1:0,40:40:99:1413,114,0	1/1:0,13:13:33.10:409,33,0	0/0:27,0:27:78.26:0,78,1122	0/0:27,0:27:78.26:0,78,1123	0/0:12,0:12:36.10:0,36,481	0/0:12,0:12:33.11:0,33,475	1/1:1,13:14:39.12:484,39,0	1/1:2,41:43:99:1487,120,0	1/1:0,3:3:9.03:112,9,0
chr10	44378635	.	T	TATAC	10308.66	PASS	AB=0.733;AC=43;AF=0.860;AN=50;BaseQRankSum=-2.296;DP=641;FS=4.337;HRun=0;HaplotypeScore=128.3686;InbreedingCoeff=0.7014;MQ=57.66;MQ0=7;MQRankSum=-1.425;QD=19.41;ReadPosRankSum=-2.011;VQSLOD=4.1439;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:17,8:26:24.08:547,24,0	1/1:12,0:12:9.03:165,9,0	./.	./.	1/1:15,0:26:14.16:83,14,0	0/0:21,0:21:33.11:0,33,505	0/0:19,0:19:12.04:0,12,182	1/1:52,0:45:10.23:98,10,0	0/0:29,0:29:60.20:0,60,916	1/1:34,0:34:36.12:556,36,0	1/1:27,0:27:14.76:162,15,0	1/1:8,7:16:21.07:482,21,0	1/1:17,10:27:30.10:694,30,0	1/1:10,7:17:18.06:421,18,0	1/1:26,0:26:18.06:254,18,0	1/1:19,0:21:21.05:314,21,0	1/1:22,0:22:2.47:470,2,0	./.	1/1:19,5:21:15.05:350,15,0	1/1:19,12:32:36.12:842,36,0	1/1:7,16:24:42.14:982,42,0	1/1:15,15:30:39.13:912,39,0	0/1:14,8:22:68.15:397,0,68	1/1:7,3:11:6.02:140,6,0	1/1:18,0:20:24.08:432,24,0	1/1:9,8:20:36.09:680,36,0	1/1:18,10:29:33.11:767,33,0	1/1:5,8:13:24.08:561,24,0
chr10	44378681	.	T	TAC	1531.97	PASS	AB=0.949;AC=20;AF=0.357;AN=56;BaseQRankSum=16.383;DP=645;FS=29.123;HRun=0;HaplotypeScore=141.5256;InbreedingCoeff=-0.5612;MQ=55.74;MQ0=4;MQRankSum=-1.074;QD=3.45;ReadPosRankSum=0.929;VQSLOD=1.3143;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:37,0:36:74.43:74,0,517	0/1:5,1:5:32.40:97,0,32	0/0:18,0:11:27.09:0,27,402	0/0:21,0:19:53.83:0,54,768	0/1:28,0:28:46.56:47,0,410	0/0:28,0:28:78.26:0,78,1191	0/0:13,0:13:33.11:0,33,504	0/0:40,0:33:9.55:0,10,539	0/0:37,0:37:99:0,102,1555	0/1:23,2:25:99:122,0,395	0/1:22,3:25:27.68:28,0,263	0/1:15,0:15:54.67:55,0,174	0/1:21,0:21:77.74:78,0,357	0/1:20,0:20:30.67:31,0,496	0/1:23,2:26:88.59:89,0,357	0/1:16,4:20:99:154,0,124	0/1:14,7:21:99:175,0,225	0/0:13,0:13:3.95:0,4,227	0/0:31,0:30:16.90:0,17,988	0/1:27,0:27:99:107,0,346	0/1:33,0:33:99:106,0,687	0/1:27,0:27:99:109,0,476	0/1:15,0:15:45.96:46,0,282	0/1:10,0:10:4.21:4,0,250	0/1:12,4:16:60.89:161,0,61	0/1:27,0:27:53.87:54,0,671	0/1:26,0:26:95.99:96,0,567	0/1:19,0:19:60.11:60,0,331
chr10	44378683	.	T	TAC	519.72	PASS	AB=0.894;AC=10;AF=0.179;AN=56;BaseQRankSum=6.399;DP=622;FS=9.701;HRun=0;HaplotypeScore=132.1708;InbreedingCoeff=-0.1954;MQ=56.44;MQ0=4;MQRankSum=-3.652;QD=2.59;ReadPosRankSum=-4.935;VQSLOD=-0.3307;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:70.49:0,70,786	0/1:5,1:5:21.29:58,0,21	0/0:18,0:11:30.08:0,30,447	0/0:24,0:20:54.06:0,54,807	0/1:25,0:25:7:7,0,462	0/0:28,0:28:84.26:0,84,1318	0/0:13,0:13:36.08:0,36,558	0/1:33,0:29:0.93:1,0,340	0/0:37,0:37:99:0,102,1623	0/1:21,0:23:75.92:76,0,251	0/1:21,0:24:36.73:37,0,161	0/0:15,0:15:38.03:0,38,346	0/0:22,0:22:58.40:0,58,602	0/0:19,0:19:53.02:0,53,668	0/1:23,0:25:17.56:18,0,260	0/1:14,0:18:85.48:118,0,85	0/1:14,7:21:99:216,0,131	0/1:12,0:12:7.36:7,0,163	0/0:30,0:29:83.88:0,84,1188	0/0:25,0:25:69.56:0,70,671	0/0:33,0:33:93.46:0,93,1042	0/0:27,0:27:72.81:0,73,762	0/0:15,0:15:37.71:0,38,421	0/0:10,0:10:23.70:0,24,320	0/1:10,0:14:41.56:118,0,42	0/0:27,0:27:76.75:0,77,977	0/0:27,0:27:69.60:0,70,822	0/0:19,0:19:52.56:0,53,508
chr10	44379052	.	C	CGT	6699.95	PASS	AB=0.806;AC=44;AF=0.786;AN=56;BaseQRankSum=6.632;DP=479;FS=3.623;HRun=0;HaplotypeScore=105.9258;InbreedingCoeff=0.8095;MQ=68.10;MQ0=2;MQRankSum=-1.705;QD=16.88;ReadPosRankSum=3.233;VQSLOD=4.8467;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:41,0:40:88.89:376,89,0	1/1:0,4:4:12:169,12,0	0/0:16,0:15:33.48:0,33,355	0/1:19,0:18:12.59:13,0,253	1/1:17,0:17:38.20:178,38,0	0/0:10,0:10:27.09:0,27,343	0/0:16,0:16:36.08:0,36,417	0/0:21,0:21:39.11:0,39,472	0/0:19,0:19:51.13:0,51,619	1/1:5,20:25:59.09:921,59,0	1/1:1,12:13:27.09:448,27,0	1/1:16,0:16:32.66:135,33,0	1/1:11,0:11:21.98:100,22,0	1/1:6,0:6:8.04:34,8,0	1/1:0,12:12:33.11:548,33,0	0/1:4,7:11:1.54:325,0,2	1/1:3,21:25:45.15:747,45,0	1/1:2,12:14:30.10:498,30,0	1/1:10,0:9:22.03:111,22,0	1/1:15,0:15:30.96:141,31,0	1/1:25,0:25:56.63:241,57,0	1/1:21,0:21:38.91:165,39,0	1/1:8,0:8:15.95:67,16,0	1/1:29,0:29:61.94:263,62,0	1/1:6,15:21:42.14:695,42,0	1/1:27,0:27:52.57:293,53,0	1/1:15,0:15:34.48:142,34,0	1/1:12,0:12:21.56:91,22,0
chr10	44379063	.	G	GT	8833.94	PASS	AB=0.995;AC=36;AF=0.643;AN=56;BaseQRankSum=10.586;DP=495;FS=7.452;HRun=1;HaplotypeScore=87.0078;InbreedingCoeff=0.4158;MQ=68.09;MQ0=13;MQRankSum=-2.273;QD=22.14;ReadPosRankSum=8.471;VQSLOD=4.1586;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,42:41:99:1402,102,0	0/1:5,0:5:11.42:42,0,11	0/0:17,0:16:41.41:0,41,452	0/0:19,0:20:47.60:0,48,629	1/1:0,19:19:42.05:545,42,0	0/0:10,0:10:30.10:0,30,413	0/0:12,0:12:33.07:0,33,410	0/0:18,0:17:51.15:0,51,655	0/0:19,0:19:57.15:0,57,748	0/1:30,0:30:99:210,0,205	0/1:12,0:12:8.47:80,0,8	1/1:3,13:16:36.48:478,36,0	1/1:2,10:11:24.08:340,24,0	1/1:0,7:7:9.03:126,9,0	0/1:13,0:13:2.98:99,0,3	0/1:11,0:11:53.23:53,0,103	0/1:25,0:25:47.75:132,0,48	0/1:13,0:13:5.90:90,0,6	1/1:1,12:10:26.92:311,27,0	1/1:1,14:14:33.47:438,33,0	1/1:0,29:29:63.21:882,63,0	1/1:1,21:21:48.04:620,48,0	1/1:0,10:9:18.06:251,18,0	1/1:2,29:29:72.24:1008,72,0	0/1:21,1:22:44.75:136,0,45	1/1:0,22:22:60.07:740,60,0	1/1:1,16:15:39.02:515,39,0	1/1:0,12:12:24.08:336,24,0
chr10	44379190	.	TA	T	6828.49	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-4.036;DP=499;FS=1.181;HRun=8;HaplotypeScore=59.4936;InbreedingCoeff=0.9906;MQ=69.15;MQ0=1;MQRankSum=1.186;QD=24.65;ReadPosRankSum=3.950;VQSLOD=5.5186;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,25:27:43.33:586,43,0	0/0:6,0:6:15.04:0,15,171	0/0:17,1:15:42.13:0,42,506	0/0:10,0:9:15.13:0,15,212	1/1:4,24:28:72.11:695,72,0	0/0:12,0:12:36.07:0,36,418	0/0:12,0:12:33.09:0,33,387	0/0:24,0:24:56.18:0,56,631	0/0:13,0:13:36.11:0,36,435	0/0:2,0:24:63.18:0,63,321	0/0:2,0:28:71.97:0,72,371	1/1:0,11:11:30.05:290,30,0	1/1:3,13:16:39.06:377,39,0	1/1:1,10:11:30.05:290,30,0	0/0:0,0:13:31.63:0,32,161	0/0:4,0:12:23.12:0,23,127	0/0:14,0:14:36.10:0,36,424	0/0:2,0:13:31.63:0,32,161	1/1:3,11:14:33.05:319,33,0	1/1:1,34:35:90.13:869,90,0	1/1:5,12:17:36.05:348,36,0	1/1:0,28:27:78.12:753,78,0	1/1:1,16:17:41.90:405,42,0	1/1:1,10:11:27.04:261,27,0	0/0:3,0:22:49:0,49,259	1/1:3,31:34:90.09:855,90,0	1/1:0,24:24:69.11:666,69,0	1/1:0,4:4:12.02:116,12,0
chr10	44379963	.	GA	G	13801.97	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=9.436;DP=673;FS=21.592;HRun=5;HaplotypeScore=76.7134;InbreedingCoeff=0.9947;MQ=80.75;MQ0=0;MQRankSum=-1.033;QD=29.06;ReadPosRankSum=5.413;VQSLOD=3.0998;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,17:18:48.14:544,48,0	0/0:16,0:16:45.06:0,45,572	0/0:19,0:19:45.10:0,45,567	0/0:22,0:22:44.33:0,44,647	1/1:1,30:31:78.16:868,78,0	0/0:26,0:26:75.19:0,75,967	0/0:18,0:18:54.15:0,54,706	0/0:32,0:32:78.24:0,78,1026	0/0:39,0:39:99:0,114,1484	1/1:2,17:19:45.12:505,45,0	1/1:1,20:21:54.15:611,54,0	1/1:0,20:20:51.15:578,51,0	1/1:2,25:27:72.20:814,72,0	1/1:1,18:19:45.13:510,45,0	1/1:2,34:36:93.26:1053,93,0	1/1:1,22:23:60.17:678,60,0	0/0:26,0:26:66.20:0,66,869	1/1:1,17:18:51.14:577,51,0	1/1:3,21:24:66.14:731,66,0	1/1:1,28:29:81.23:918,81,0	1/1:0,30:30:78.09:865,78,0	1/1:0,32:32:84.24:951,84,0	1/1:2,26:28:66.10:739,66,0	1/1:0,17:17:51.15:578,51,0	1/1:3,14:17:12.19:350,12,0	1/1:2,27:29:83.98:913,84,0	1/1:3,26:29:66.19:748,66,0	1/1:0,8:8:24.07:272,24,0
chr10	44380584	.	T	TTTCAGAG	24391.09	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=6.040;DP=571;FS=5.393;HRun=0;HaplotypeScore=129.6212;InbreedingCoeff=0.9147;MQ=92.59;MQ0=0;MQRankSum=-16.387;QD=90.67;ReadPosRankSum=1.152;VQSLOD=5.9771;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,14:17:45.15:1829,45,0	0/0:8,0:8:24.08:0,24,671	0/0:29,0:29:15.27:0,15,1570	0/1:31,0:31:48.81:49,0,1558	1/1:2,19:22:57.15:2190,57,0	0/0:23,0:23:69.24:0,69,1883	0/0:14,0:14:42.13:0,42,1093	0/0:42,0:42:99:0,126,3324	0/0:25,0:25:72.25:0,72,1962	0/0:33,0:33:96.32:0,96,2590	0/0:26,0:26:75.26:0,75,2079	1/1:2,15:21:48.16:1930,48,0	1/1:0,9:9:27.09:1129,27,0	1/1:1,16:20:51.18:2064,51,0	0/0:33,0:32:99:0,99,2708	0/0:22,0:21:66.23:0,66,1845	0/0:21,0:21:63.18:0,63,1535	0/0:11,0:11:33.11:0,33,900	1/1:3,16:21:60.18:2326,60,0	1/1:5,14:23:57.15:2149,57,0	1/1:0,7:9:18.02:647,18,0	1/1:5,18:25:69.24:2670,69,0	1/1:1,10:15:32.82:1266,33,0	1/1:1,7:10:15.05:627,15,0	0/0:15,0:15:42.14:0,42,1124	1/1:3,21:25:75.24:3005,75,0	1/1:0,16:18:51.18:2133,51,0	1/1:0,3:3:9.03:377,9,0
chr10	44381973	.	T	TG	186.42	PASS	AB=0.944;AC=6;AF=0.111;AN=54;BaseQRankSum=-2.573;DP=283;FS=3.275;HRun=8;HaplotypeScore=45.8048;InbreedingCoeff=0.6613;MQ=60.39;MQ0=4;MQRankSum=0.379;QD=7.17;ReadPosRankSum=-1.048;VQSLOD=-0.0494;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:30.01:0,30,274	0/1:2,0:2:0:0,0,0	0/0:23,0:13:26.85:0,27,233	0/0:17,0:11:16.51:0,17,232	0/0:9,0:9:24.01:0,24,219	0/0:3,0:3:9:0,9,82	0/0:15,0:15:39.01:0,39,357	1/1:3,3:7:11.87:117,12,0	0/0:8,0:8:8.99:0,9,82	0/0:7,0:7:21.01:0,21,192	0/0:10,0:10:24:0,24,216	0/0:6,0:6:12.01:0,12,110	0/0:13,0:13:23.99:0,24,220	0/0:10,0:10:27.01:0,27,247	0/0:3,0:3:9:0,9,82	0/0:8,0:8:17.96:0,18,165	1/1:2,7:9:15.04:173,15,0	0/1:7,1:8:16.59:17,0,119	0/0:6,0:6:18.01:0,18,164	0/0:10,0:10:26.92:0,27,230	0/0:24,0:24:51.02:0,51,465	0/0:8,0:8:24:0,24,215	0/0:13,0:13:30.01:0,30,274	0/0:19,0:19:51.01:0,51,466	0/0:12,0:12:27.01:0,27,247	0/0:10,0:10:21.01:0,21,192	0/0:11,0:11:18:0,18,165	./.
chr10	44382119	.	G	GA	5826.27	PASS	AB=0.577;AC=32;AF=0.571;AN=56;BaseQRankSum=-5.081;DP=394;FS=8.620;HRun=9;HaplotypeScore=62.3589;InbreedingCoeff=0.8446;MQ=63.74;MQ0=1;MQRankSum=-3.082;QD=24.69;ReadPosRankSum=1.447;VQSLOD=5.5409;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,13:14:39.11:431,39,0	1/1:0,3:3:9.02:100,9,0	0/0:13,0:11:23.93:0,24,200	0/0:12,0:10:14.98:0,15,128	1/1:7,10:17:10.50:329,11,0	0/0:7,0:7:14.92:0,15,121	0/0:18,0:18:44.99:0,45,391	1/1:3,14:17:42.10:451,42,0	0/0:25,0:25:65.97:0,66,573	0/0:16,0:16:38.95:0,39,339	0/0:13,0:14:41:0,41,338	1/1:4,10:14:7.03:306,7,0	1/1:2,9:11:27.07:299,27,0	1/1:3,4:7:12.03:133,12,0	0/0:9,0:9:23.99:0,24,208	0/0:9,0:9:23.98:0,24,208	1/1:4,10:14:36.10:398,36,0	0/0:16,0:16:38.94:0,39,331	1/1:5,7:12:21.04:225,21,0	1/1:4,19:23:57.15:630,57,0	0/1:2,6:8:5:178,0,5	1/1:2,18:20:26.28:506,26,0	1/1:4,13:18:45.11:488,45,0	1/1:3,10:12:27.06:290,27,0	0/0:18,0:18:47.99:0,48,417	1/1:4,10:14:33.09:364,33,0	1/1:9,15:24:51.14:564,51,0	0/1:2,5:7:8.05:134,0,8
chr10	44383399	.	A	ACTGCTGTC	14279.01	PASS	AB=0.560;AC=37;AF=0.685;AN=54;BaseQRankSum=8.006;DP=555;FS=0.000;HRun=0;HaplotypeScore=117.8621;InbreedingCoeff=0.8228;MQ=55.79;MQ0=8;MQRankSum=-14.239;QD=41.15;ReadPosRankSum=3.540;VQSLOD=4.4067;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,12:13:18.06:783,18,0	0/0:9,0:9:27.09:0,27,744	0/0:25,0:21:57.19:0,57,1475	0/0:25,0:24:69.22:0,69,1559	1/1:6,22:20:17.68:782,18,0	0/0:23,0:23:60.19:0,60,1525	0/0:20,0:20:54.17:0,54,1352	0/0:38,0:38:96.31:0,96,2471	0/0:30,0:30:81.26:0,81,2104	1/1:12,15:19:36.12:1380,36,0	1/1:6,13:17:18.06:781,18,0	1/1:3,13:11:9.03:392,9,0	1/1:5,11:13:24.08:1039,24,0	1/1:3,11:8:15.05:652,15,0	1/1:6,15:17:20.66:909,21,0	0/1:6,19:22:47.05:1402,0,47	0/0:34,0:34:96.31:0,96,2586	1/1:4,4:7:9.03:393,9,0	1/1:1,8:6:18.06:785,18,0	1/1:8,11:14:14.89:651,15,0	./.	1/1:6,17:22:21.07:835,21,0	1/1:6,10:11:15.05:650,15,0	1/1:1,10:7:3.01:130,3,0	1/1:8,8:11:12.04:366,12,0	1/1:6,16:18:33.11:1310,33,0	1/1:6,16:16:20.94:907,21,0	1/1:0,3:1:3.01:131,3,0
chr10	44384116	.	CT	C	6073.88	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=12.652;DP=505;FS=4.113;HRun=7;HaplotypeScore=72.4505;InbreedingCoeff=0.9513;MQ=64.06;MQ0=2;MQRankSum=-5.315;QD=27.00;ReadPosRankSum=0.627;VQSLOD=5.6176;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:24,13:37:99:993,99,0	0/0:10,0:10:27.08:0,27,329	0/0:24,0:13:11.74:0,12,269	0/0:20,0:15:31.06:0,31,368	1/1:16,17:33:87.18:878,87,0	0/0:15,0:15:42.12:0,42,515	0/0:15,0:15:36.12:0,36,453	0/0:28,0:28:75.24:0,75,944	0/0:16,0:16:39.11:0,39,477	0/0:34,0:34:93.28:0,93,1147	0/0:19,0:19:57.18:0,57,717	1/1:0,3:3:9.02:91,9,0	1/1:10,0:10:27.05:274,27,0	1/1:4,5:9:27.06:274,27,0	0/0:14,0:14:39.12:0,39,491	0/0:13,0:13:33.10:0,33,405	0/0:28,0:28:75.21:0,75,927	0/0:12,0:12:36.07:0,36,433	1/1:12,4:16:33.06:330,33,0	1/1:21,11:32:87.16:871,87,0	1/1:2,2:4:12.02:121,12,0	1/1:4,10:14:36.28:386,36,0	1/1:11,3:14:42.06:412,42,0	1/1:5,2:7:18.04:182,18,0	0/0:29,0:29:75.23:0,75,933	1/1:9,6:14:1.35:329,1,0	1/1:11,10:21:63.11:626,63,0	1/1:5,5:10:30.07:306,30,0
chr10	44384129	.	C	CT	5779.04	PASS	AB=0.909;AC=27;AF=0.482;AN=56;BaseQRankSum=10.403;DP=511;FS=10.669;HRun=9;HaplotypeScore=78.8972;InbreedingCoeff=0.9219;MQ=65.41;MQ0=2;MQRankSum=-4.076;QD=25.02;ReadPosRankSum=-0.033;VQSLOD=4.7719;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:26,8:34:49.13:760,49,0	0/0:10,0:10:29.99:0,30,260	0/0:27,0:16:29.97:0,30,256	0/0:23,1:15:9.04:0,9,118	1/1:18,15:32:75.66:817,76,0	0/0:13,0:13:35.97:0,36,308	0/0:14,0:14:38.94:0,39,331	0/0:32,0:32:62.94:0,63,541	0/0:16,0:16:44.96:0,45,386	0/0:30,0:30:77.97:0,78,675	0/0:21,0:21:50.98:0,51,443	1/1:1,5:6:12.03:132,12,0	1/1:9,2:11:30.08:331,30,0	1/1:5,5:10:24.06:264,24,0	0/0:12,0:12:26.99:0,27,234	0/0:12,0:12:32.99:0,33,287	0/0:28,0:28:74.95:0,75,645	0/0:11,0:11:32.99:0,33,286	1/1:8,5:13:33.09:365,33,0	1/1:18,9:27:66.17:718,66,0	1/1:2,2:4:12.03:132,12,0	1/1:5,11:16:43.96:489,44,0	1/1:12,3:15:36.04:375,36,0	1/1:10,1:11:27.06:288,27,0	0/0:29,0:30:76.98:0,77,652	1/1:10,6:15:10.04:339,10,0	1/1:14,10:24:34.09:593,34,0	0/1:9,1:10:5:178,0,5
chr10	44384726	.	G	GA	15709.51	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-8.023;DP=586;FS=4.501;HRun=5;HaplotypeScore=63.9886;InbreedingCoeff=0.9854;MQ=64.61;MQ0=0;MQRankSum=-0.434;QD=32.66;ReadPosRankSum=2.302;VQSLOD=5.6005;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,45:50:99:1643,126,0	1/1:2,0:9:20.13:103,20,0	0/0:19,0:17:45.10:0,45,473	0/0:20,0:20:40.38:0,40,384	1/1:0,24:24:60.20:790,60,0	0/0:17,0:17:51.13:0,51,548	0/0:23,0:23:60.13:0,60,636	1/1:2,20:22:57.19:749,57,0	0/0:26,0:26:72.13:0,72,760	1/1:3,28:31:84.26:1091,84,0	1/1:0,19:19:48.11:612,48,0	1/1:0,17:17:51.17:671,51,0	1/1:1,10:11:27.09:355,27,0	1/1:1,21:22:60.20:790,60,0	1/1:2,19:21:54.18:711,54,0	1/1:3,14:16:9.89:481,10,0	1/1:1,0:18:34.50:177,35,0	1/1:4,20:24:60.20:789,60,0	1/1:2,16:18:45.14:579,45,0	1/1:2,31:33:96.99:1181,97,0	1/1:2,18:20:51.17:671,51,0	1/1:5,16:21:45.06:570,45,0	1/1:0,27:27:74.83:986,75,0	1/1:0,12:12:36.12:474,36,0	1/1:1,16:17:48.16:632,48,0	1/1:0,20:20:60.20:789,60,0	1/1:3,19:22:48.16:631,48,0	1/1:0,6:6:18.06:237,18,0
chr10	44385525	.	CAA	C	5334.80	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=13.378;DP=483;FS=9.551;HRun=3;HaplotypeScore=55.3720;InbreedingCoeff=0.9758;MQ=65.88;MQ0=1;MQRankSum=0.156;QD=43.37;ReadPosRankSum=3.437;VQSLOD=3.5251;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:51.16:0,51,952	0/0:6,0:6:18.05:0,18,316	0/0:10,0:10:29.93:0,30,536	0/0:3,0:3:6.02:0,6,116	0/0:23,0:23:69.23:0,69,1290	0/0:24,0:24:72.24:0,72,1351	0/0:7,0:7:21.07:0,21,406	0/0:34,0:34:99:0,99,1824	0/0:11,0:11:33.09:0,33,574	1/1:0,24:24:72.22:1061,72,0	1/1:0,26:26:78.26:1183,78,0	0/0:10,0:10:30.10:0,30,579	0/0:16,0:16:48.16:0,48,890	0/0:15,0:15:45.15:0,45,861	1/1:0,26:25:69.23:1055,69,0	1/1:0,9:9:27.09:413,27,0	0/0:29,0:29:87.29:0,87,1645	1/1:1,12:13:36.04:520,36,0	0/0:21,0:21:60.17:0,60,1064	0/0:26,0:26:78.22:0,78,1400	0/0:15,0:15:45.13:0,45,805	0/0:9,0:9:27.09:0,27,521	0/0:12,0:12:36.12:0,36,695	0/0:10,0:10:30.10:0,30,579	1/1:0,25:25:72.24:1102,72,0	0/0:20,0:20:60.21:0,60,1159	0/0:20,0:20:60.19:0,60,1126	0/0:20,0:20:47.63:0,48,858
chr10	44386935	.	CATA	C	13305.40	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=11.990;DP=592;FS=9.267;HRun=0;HaplotypeScore=126.3889;InbreedingCoeff=0.9987;MQ=70.83;MQ0=0;MQRankSum=-3.555;QD=44.35;ReadPosRankSum=4.042;VQSLOD=6.1715;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,17:17:45.15:743,45,0	0/0:14,0:14:39.12:0,39,879	0/0:21,0:21:50.63:0,51,919	0/0:9,0:9:27.08:0,27,529	1/1:0,17:17:48.08:769,48,0	0/0:22,0:22:60.21:0,60,1384	0/0:14,0:14:42.14:0,42,964	0/0:33,0:33:96.33:0,96,2215	0/0:22,0:22:63.22:0,63,1453	0/0:24,0:23:69.19:0,69,1543	0/0:22,0:21:60.12:0,60,1268	1/1:2,21:23:53.79:919,54,0	1/1:1,22:23:54.02:919,54,0	1/1:0,21:21:60.21:1022,60,0	0/0:18,0:15:45.14:0,45,992	0/0:21,0:21:57.20:0,57,1297	0/0:18,0:18:51.16:0,51,1126	0/0:23,0:23:69.22:0,69,1529	1/1:0,22:21:60.14:963,60,0	1/1:3,31:32:84.29:1432,84,0	1/1:0,20:20:45.15:767,45,0	1/1:0,28:28:81.28:1380,81,0	1/1:0,23:23:66.23:1124,66,0	1/1:1,17:18:39.13:665,39,0	0/0:31,0:26:78.18:0,78,1684	1/1:0,19:19:57.19:965,57,0	1/1:0,28:28:78.27:1329,78,0	1/1:1,6:7:18.06:307,18,0
chr10	44387165	.	AG	A	848.85	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=8.547;DP=582;FS=51.530;HRun=1;HaplotypeScore=66.4313;InbreedingCoeff=0.9102;MQ=77.81;MQ0=4;MQRankSum=-8.483;QD=17.68;ReadPosRankSum=1.908;VQSLOD=0.8063;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:78.24:0,78,1218	0/0:11,0:11:33.11:0,33,527	0/0:20,0:20:60.17:0,60,867	0/0:24,0:24:66.22:0,66,1027	0/0:33,0:32:96.31:0,96,1507	0/0:36,0:36:99:0,108,1655	0/0:16,0:16:48.15:0,48,743	0/0:47,0:47:99:0,141,2184	0/0:29,0:29:84.29:0,84,1338	1/1:0,10:5:15.05:209,15,0	1/1:0,2:1:3.01:42,3,0	0/0:20,0:20:60.19:0,60,931	0/0:18,0:18:54.17:0,54,826	0/0:15,0:15:45.05:0,45,663	1/1:0,6:2:2.97:20,3,0	1/1:0,9:8:21.07:293,21,0	0/0:21,0:20:63.13:0,63,976	1/1:0,7:6:15.05:204,15,0	0/0:19,0:19:57.17:0,57,848	0/0:47,0:39:99:0,114,1787	0/0:17,0:17:51.17:0,51,815	0/0:28,0:28:84.29:0,84,1336	0/0:29,0:27:81.28:0,81,1283	0/0:20,0:20:60.20:0,60,959	1/1:0,14:8:18.06:251,18,0	0/0:30,1:31:51.44:0,51,1371	0/0:23,0:23:69.22:0,69,1070	0/0:4,0:4:12.04:0,12,191
chr10	44387816	.	GT	G	6475.37	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=-0.262;DP=481;FS=0.000;HRun=10;HaplotypeScore=58.9628;InbreedingCoeff=0.9691;MQ=63.37;MQ0=38;MQRankSum=-0.606;QD=18.71;ReadPosRankSum=2.576;VQSLOD=5.5557;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,15:14:38.99:339,39,0	0/0:2,0:10:20.12:0,20,107	0/0:30,0:20:43.20:0,43,369	0/0:20,0:9:14.82:0,15,137	1/1:1,30:27:68.98:599,69,0	0/0:15,1:16:13.04:0,13,354	0/0:20,2:18:16.06:0,16,405	1/1:3,19:21:56.99:494,57,0	0/0:14,0:11:27.06:0,27,291	1/1:1,21:21:46.04:458,46,0	1/1:2,23:21:56.98:494,57,0	1/1:1,10:9:15:130,15,0	1/1:1,12:8:21:182,21,0	1/1:2,13:11:29.99:260,30,0	1/1:2,17:17:41.99:365,42,0	1/1:2,9:12:13.96:110,14,0	0/0:5,0:22:42.99:0,43,217	1/1:2,13:15:35.99:313,36,0	1/1:5,11:14:29.97:256,30,0	1/1:4,19:21:47.98:416,48,0	1/1:0,4:4:12:104,12,0	1/1:0,14:13:23.99:208,24,0	1/1:1,19:20:53.99:469,54,0	1/1:1,11:11:23.98:208,24,0	1/1:1,20:19:47.99:417,48,0	1/1:1,17:14:41.01:341,41,0	1/1:0,10:10:24:208,24,0	1/1:1,4:4:12:104,12,0
chr10	44388341	.	CAGG	C	4066.09	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=6.972;DP=586;FS=0.910;HRun=0;HaplotypeScore=102.0992;InbreedingCoeff=0.9340;MQ=75.95;MQ0=0;MQRankSum=-2.095;QD=33.88;ReadPosRankSum=4.477;VQSLOD=4.3673;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:90.29:0,90,1973	0/0:10,0:10:27.09:0,27,612	0/0:29,0:28:76.37:0,76,1499	0/0:24,0:23:50.31:0,50,1123	0/0:7,0:7:18.06:0,18,407	0/0:14,0:14:39.13:0,39,877	0/0:16,0:16:42.14:0,42,949	0/0:26,0:23:60.20:0,60,1280	0/0:32,0:32:96.32:0,96,2109	0/0:22,0:22:54.18:0,54,1147	0/0:18,0:18:45.13:0,45,937	1/1:10,13:23:54.18:891,54,0	1/1:4,16:20:0.61:741,1,0	1/1:6,18:23:48.06:793,48,0	0/0:20,0:20:60.21:0,60,1360	0/0:16,0:16:39.13:0,39,878	0/0:27,0:27:78.27:0,78,1747	0/0:23,0:23:69.24:0,69,1518	0/0:14,0:14:36.11:0,36,772	0/0:21,0:21:42.12:0,42,842	0/0:48,0:48:99:0,138,2926	1/1:4,5:9:15.05:247,15,0	1/1:6,8:14:11.99:196,12,0	1/1:0,30:30:71.83:1198,72,0	0/0:17,0:17:42.14:0,42,931	0/0:20,0:20:48.16:0,48,1087	0/0:20,0:20:60.19:0,60,1304	0/0:5,0:5:15.05:0,15,340
chr10	44388344	.	GA	G	363.45	PASS	AB=0.915;AC=10;AF=0.179;AN=56;BaseQRankSum=13.415;DP=589;FS=0.892;HRun=1;HaplotypeScore=92.6745;InbreedingCoeff=0.7505;MQ=75.88;MQ0=0;MQRankSum=-2.212;QD=2.98;ReadPosRankSum=4.635;VQSLOD=-0.1233;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:96.29:0,96,1477	0/0:11,0:11:30.09:0,30,456	0/0:29,0:28:80.82:0,81,1218	0/0:23,0:22:50.82:0,51,818	0/0:8,0:8:21.07:0,21,331	0/0:15,0:15:42.13:0,42,645	0/0:18,0:18:54.15:0,54,809	0/0:24,0:21:63.20:0,63,966	0/0:32,0:32:96.31:0,96,1504	0/0:22,0:22:57.19:0,57,889	0/0:17,0:17:48.15:0,48,725	1/1:18,4:22:39.56:152,40,0	0/1:20,1:21:36.44:54,0,36	1/1:22,3:24:11.45:74,11,0	0/0:23,0:23:69.22:0,69,1074	0/0:16,0:16:42.14:0,42,661	0/0:27,0:27:78.27:0,78,1244	0/0:25,0:25:75.20:0,75,1146	0/0:15,0:15:45.08:0,45,627	0/0:16,0:16:44.88:0,45,649	0/0:49,0:49:99:0,141,2156	1/1:7,1:8:10.94:54,11,0	0/1:12,2:14:8.31:71,0,8	1/1:32,0:32:28.70:123,29,0	0/0:16,0:16:45.14:0,45,693	0/0:18,0:18:51.17:0,51,795	0/0:22,0:22:66.18:0,66,985	0/0:5,0:5:15.05:0,15,240
chr10	44389039	.	AGT	A	2110.55	PASS	AB=0.984;AC=29;AF=0.518;AN=56;BaseQRankSum=10.221;DP=690;FS=5.057;HRun=0;HaplotypeScore=162.3488;InbreedingCoeff=0.1020;MQ=68.33;MQ0=7;MQRankSum=-2.131;QD=4.92;ReadPosRankSum=4.584;VQSLOD=2.6877;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:28:20.62:170,0,21	0/1:9,0:9:2.41:2,0,229	0/0:76,0:34:12.03:0,12,162	0/0:78,0:48:34.38:0,34,359	0/1:11,0:11:14.13:123,0,14	0/0:27,2:29:34.58:0,35,942	0/1:20,2:22:33.21:33,0,414	0/0:40,0:39:28.98:0,29,212	0/1:13,1:14:1.55:2,0,430	0/1:12,0:12:12.36:13,0,12	0/0:13,0:13:2.25:0,2,24	1/1:29,0:29:31.83:181,32,0	1/1:16,0:16:26.85:173,27,0	1/1:20,0:20:24.86:149,25,0	0/0:15,0:15:6.07:0,6,53	0/1:11,0:11:26.70:28,0,27	0/1:35,0:35:18.55:19,0,799	0/0:10,0:10:6.03:0,6,28	0/1:22,0:19:49.82:50,0,62	1/1:21,0:21:29.65:226,30,0	1/1:48,0:47:60.12:444,60,0	1/1:10,3:13:14.80:116,15,0	0/1:28,0:28:14.51:55,0,15	0/1:15,1:16:4.10:39,0,4	0/1:15,0:15:8.49:8,0,51	1/1:25,0:25:12.96:205,13,0	1/1:21,0:21:8.87:187,9,0	0/1:12,0:12:9.02:66,0,9
chr10	44389062	.	GTGTGTA	G	2987.50	PASS	AB=0.995;AC=20;AF=0.357;AN=56;BaseQRankSum=3.524;DP=652;FS=6.123;HRun=0;HaplotypeScore=216.8315;InbreedingCoeff=0.1682;MQ=44.35;MQ0=15;MQRankSum=-4.447;QD=8.97;ReadPosRankSum=-1.675;VQSLOD=2.0674;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:35,0:34:10.59:11,0,146	0/0:10,0:10:21.04:0,21,384	0/0:59,0:18:22.44:0,22,372	0/0:60,0:26:39.94:0,40,681	0/0:17,0:18:22.16:0,22,181	0/0:31,0:31:90.14:0,90,2169	0/0:18,0:18:45.09:0,45,959	0/1:33,0:32:99:136,0,251	0/0:16,0:16:48.15:0,48,1254	0/1:17,0:16:32.40:125,0,32	0/0:9,0:9:4.44:0,4,28	1/1:3,15:18:33.09:734,33,0	1/1:3,11:14:28.97:622,29,0	1/1:4,15:19:27.09:592,27,0	0/0:14,0:13:5.99:0,6,51	0/1:13,0:13:33.74:58,0,34	0/0:32,0:32:1.83:0,2,1441	0/1:6,0:6:26.81:27,0,37	0/1:25,0:19:99:111,0,127	0/0:24,0:24:4.28:0,4,114	0/1:51,0:48:3.64:4,0,267	1/1:8,3:11:14.93:292,15,0	0/1:29,1:30:16.08:65,0,16	1/1:13,5:18:20:294,20,0	0/1:22,0:21:10.11:10,0,53	0/0:18,0:18:11.75:0,12,199	0/1:20,0:20:88.99:89,0,105	0/0:8,0:8:8.55:0,9,53
chr10	44389064	.	GTGTA	G	3782.76	PASS	AB=0.975;AC=37;AF=0.661;AN=56;BaseQRankSum=9.595;DP=630;FS=10.446;HRun=0;HaplotypeScore=199.6765;InbreedingCoeff=0.4721;MQ=44.40;MQ0=14;MQRankSum=-4.545;QD=8.74;ReadPosRankSum=-0.771;VQSLOD=2.1171;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:34,1:34:36.51:212,37,0	0/0:10,0:10:13.30:0,13,209	0/0:51,0:17:19.39:0,19,254	0/0:59,0:24:5.98:0,6,316	0/1:18,0:18:18.52:67,0,19	0/0:31,0:31:75.04:0,75,1439	0/0:18,0:18:36:0,36,591	0/1:29,0:29:37.21:209,0,37	0/0:16,0:16:45.11:0,45,846	1/1:17,0:16:9.37:153,9,0	1/1:8,0:8:2.41:21,2,0	1/1:19,0:19:32.67:357,33,0	1/1:15,0:15:32.78:318,33,0	1/1:19,0:19:26.94:282,27,0	0/0:12,0:11:3.45:0,3,27	1/1:13,0:13:3.29:27,3,0	0/1:29,3:32:99:144,0,860	1/1:5,0:5:2.73:37,3,0	0/1:23,1:19:3:205,0,3	1/1:24,0:24:25.76:138,26,0	1/1:48,1:45:52.04:235,52,0	1/1:11,0:11:13.82:120,14,0	1/1:12,19:31:33.09:559,33,0	1/1:17,0:17:23.91:217,24,0	0/1:21,0:20:19.40:31,0,19	1/1:17,1:18:23.38:170,23,0	1/1:18,2:20:37.13:272,37,0	1/1:8,0:8:2.09:9,2,0
chr10	44389066	.	GTA	G	6200.35	PASS	AB=0.915;AC=41;AF=0.732;AN=56;BaseQRankSum=8.494;DP=604;FS=0.845;HRun=0;HaplotypeScore=173.7869;InbreedingCoeff=0.5114;MQ=44.98;MQ0=14;MQRankSum=-3.800;QD=14.16;ReadPosRankSum=0.811;VQSLOD=4.7050;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:18,16:34:10.95:431,11,0	0/1:9,1:10:45.48:45,0,81	0/0:46,0:16:28.40:0,28,322	0/0:53,0:22:26.09:0,26,464	1/1:10,8:18:4.89:318,5,0	0/0:32,0:32:64.80:0,65,1227	0/0:18,0:18:26:0,26,517	1/1:28,0:28:45.22:488,45,0	0/0:17,0:17:32.26:0,32,640	1/1:17,0:16:22.11:241,22,0	1/1:8,0:8:3:26,3,0	1/1:17,0:19:32.49:222,32,0	1/1:14,0:15:31.85:204,32,0	1/1:18,0:19:26.67:182,27,0	0/1:13,0:12:4.31:40,0,4	0/1:12,2:14:3.37:114,0,3	0/1:29,3:32:99:217,0,337	1/1:4,0:4:8.89:61,9,0	1/1:14,3:14:25.50:314,25,0	1/1:9,15:24:38.92:525,39,0	1/1:22,22:40:80.79:1062,81,0	1/1:10,0:10:14.40:85,14,0	1/1:30,2:32:4.91:187,5,0	1/1:17,0:17:23.81:175,24,0	0/1:18,3:20:8.31:44,0,8	1/1:4,12:16:44.98:564,45,0	1/1:10,9:19:44.84:509,45,0	1/1:5,2:7:8.99:145,9,0
chr10	44389070	.	GTA	G	818.92	PASS	AB=0.989;AC=24;AF=0.429;AN=56;BaseQRankSum=6.163;DP=613;FS=48.082;HRun=0;HaplotypeScore=209.3893;InbreedingCoeff=0.0066;MQ=45.56;MQ0=13;MQRankSum=-4.589;QD=2.18;ReadPosRankSum=0.983;VQSLOD=1.0881;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:34:45.99:46,0,46	0/1:10,0:10:17.36:17,0,264	0/0:40,1:16:45.14:0,45,748	0/0:54,0:23:27.72:0,28,674	0/1:19,0:19:3.42:3,0,80	0/0:29,0:29:47.58:0,48,1427	0/0:16,0:16:35.52:0,36,637	0/1:27,0:27:22.68:23,0,344	0/0:17,0:17:50.56:0,51,835	1/1:15,0:14:34.58:223,35,0	1/1:10,0:10:2.10:24,2,0	1/1:21,0:21:10.23:55,10,0	0/1:17,0:17:10.51:11,0,13	0/1:21,0:21:4.24:6,0,4	0/1:14,0:13:15.92:16,0,17	0/1:14,0:14:3.39:115,0,3	0/0:32,0:32:42.57:0,43,1074	1/1:3,0:3:8.87:60,9,0	0/0:21,0:18:21.67:0,22,268	0/1:25,0:25:22.84:23,0,43	0/1:41,0:38:63.69:64,0,72	0/0:11,0:11:4.86:0,5,16	1/1:33,2:35:12.16:96,12,0	0/0:17,0:17:16.04:0,16,90	0/1:20,1:20:9.28:44,0,9	0/1:16,1:17:29.05:77,0,29	0/1:20,0:20:66.09:66,0,81	0/1:10,0:10:25.54:26,0,43
chr10	44389096	.	TTG	T	1144.67	PASS	AB=0.600;AC=11;AF=0.196;AN=56;BaseQRankSum=2.110;DP=591;FS=15.195;HRun=0;HaplotypeScore=222.0743;InbreedingCoeff=0.8697;MQ=53.00;MQ0=6;MQRankSum=-5.588;QD=14.49;ReadPosRankSum=-6.412;VQSLOD=0.9053;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:54.69:0,55,717	0/0:7,0:7:12.04:0,12,197	0/0:51,0:27:53.99:0,54,781	0/0:49,0:28:51.76:0,52,763	0/0:21,0:21:41.95:0,42,504	0/0:31,0:31:81.16:0,81,1302	0/0:20,0:20:51.17:0,51,822	0/0:29,0:29:74.84:0,75,1015	0/0:20,0:20:45.13:0,45,739	1/1:4,12:14:32.14:458,32,0	1/1:2,10:12:23.74:159,24,0	0/0:19,0:19:33.10:0,33,416	0/0:14,0:14:33.05:0,33,371	0/0:20,0:20:39.10:0,39,474	1/1:3,9:11:20.84:156,21,0	1/1:4,9:13:29.72:248,30,0	0/0:35,0:35:76.08:0,76,1205	0/1:1,2:3:11.60:68,0,12	0/0:16,0:16:36.05:0,36,386	0/0:21,0:21:51.15:0,51,608	0/0:26,0:25:21.23:0,21,421	0/0:6,0:6:10.27:0,10,114	0/0:31,0:31:75.21:0,75,907	0/0:16,0:16:15.04:0,15,167	1/1:8,15:22:16.65:233,17,0	0/0:13,0:13:36.05:0,36,400	0/0:24,0:24:63.19:0,63,749	0/0:9,0:8:18.06:0,18,221
chr10	44389112	.	GTA	G	2940.21	PASS	AB=1.000;AC=24;AF=0.429;AN=56;BaseQRankSum=12.360;DP=647;FS=12.562;HRun=0;HaplotypeScore=222.2444;InbreedingCoeff=0.6153;MQ=51.99;MQ0=15;MQRankSum=-11.777;QD=10.89;ReadPosRankSum=7.335;VQSLOD=1.6493;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:34,0:34:58.39:374,58,0	0/0:6,0:6:2.40:0,2,240	0/0:63,0:23:35.75:0,36,692	0/0:55,0:20:25.78:0,26,620	1/1:18,0:18:35.35:248,35,0	0/0:29,0:29:84.22:0,84,1540	0/0:26,0:26:72.25:0,72,1372	0/0:35,1:35:50.46:0,50,680	0/0:22,0:22:32.29:0,32,901	0/0:26,0:24:61.82:0,62,1115	0/0:17,0:17:16.64:0,17,609	1/1:16,0:16:32.02:225,32,0	1/1:11,1:12:29.58:231,30,0	1/1:21,2:23:38.61:309,39,0	0/0:17,0:16:39.07:0,39,650	0/0:17,0:17:42.13:0,42,654	0/0:31,0:30:75.81:0,76,1427	0/0:8,0:8:0:0,0,267	0/1:17,0:17:54.71:173,0,55	1/1:19,0:19:25.24:303,25,0	0/1:26,0:25:21.92:183,0,22	1/1:11,1:12:14.76:101,15,0	0/1:30,0:30:10.66:360,0,11	1/1:17,0:17:19.07:112,19,0	0/0:24,0:24:57.12:0,57,886	0/1:14,0:14:77.12:100,0,77	1/1:25,0:25:1.54:330,2,0	1/1:7,0:6:14.52:98,15,0
chr10	44389114	.	ATG	A	6349.46	PASS	AB=1.000;AC=30;AF=0.536;AN=56;BaseQRankSum=10.140;DP=653;FS=14.649;HRun=0;HaplotypeScore=213.2644;InbreedingCoeff=0.8664;MQ=50.86;MQ0=17;MQRankSum=-10.717;QD=17.35;ReadPosRankSum=4.516;VQSLOD=3.6594;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,26:35:57.35:711,57,0	0/0:6,0:6:13.29:0,13,188	0/0:60,0:20:28.34:0,28,460	0/1:55,0:19:4.10:4,0,362	1/1:3,15:18:39.30:452,39,0	0/0:28,0:28:81.28:0,81,1346	0/0:27,0:27:75.23:0,75,1205	0/1:42,0:41:26.72:27,0,89	0/0:21,0:21:41.26:0,41,861	0/0:27,0:25:65.78:0,66,983	0/0:20,0:20:26.62:0,27,468	1/1:2,14:16:33.09:408,33,0	1/1:3,9:12:30.06:344,30,0	1/1:8,15:23:39.12:478,39,0	0/0:17,0:16:39.13:0,39,549	0/0:17,0:17:41.95:0,42,493	0/0:32,0:30:73.76:0,74,1088	0/0:8,0:8:18.05:0,18,253	1/1:6,11:16:36.12:467,36,0	1/1:1,18:19:48.15:609,48,0	1/1:11,15:25:39.40:442,39,0	1/1:3,9:12:14.52:159,15,0	1/1:5,25:30:63.20:794,63,0	1/1:5,11:16:20.65:240,21,0	0/0:24,0:24:56.87:0,57,651	1/1:6,7:13:16.78:263,17,0	1/1:5,20:25:57.19:738,57,0	1/1:2,5:6:18:213,18,0
chr10	44389122	.	GTGTCTT	G	3795.69	PASS	AB=1.000;AC=25;AF=0.446;AN=56;BaseQRankSum=6.165;DP=655;FS=35.234;HRun=0;HaplotypeScore=253.7729;InbreedingCoeff=0.4712;MQ=48.18;MQ0=20;MQRankSum=-6.506;QD=11.72;ReadPosRankSum=4.461;VQSLOD=1.6243;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:38,0:38:26.18:133,0,26	0/0:5,0:6:13.20:0,13,179	0/0:46,0:11:16.91:0,17,473	0/0:47,0:14:13.15:0,13,364	1/1:22,0:22:23.25:218,23,0	0/0:30,0:30:87.23:0,87,2326	0/0:30,0:30:84.18:0,84,2181	1/1:5,37:41:99:1353,108,0	0/0:23,0:23:60.17:0,60,1497	0/0:30,0:29:72.10:0,72,1140	0/0:24,0:24:49.03:0,49,723	1/1:16,0:16:18.48:217,18,0	1/1:12,0:12:28.44:297,28,0	1/1:23,0:23:25.82:236,26,0	0/0:17,0:16:42.96:0,43,640	0/0:20,0:20:43.89:0,44,648	0/0:32,0:30:74.10:0,74,1117	0/1:8,0:8:18.89:19,0,212	0/1:20,0:18:43.65:107,0,44	1/1:23,0:23:0.50:166,1,0	0/1:25,0:24:20.17:44,0,20	0/1:14,0:14:0.71:116,0,1	1/1:26,0:26:12.68:266,13,0	0/1:16,0:16:16.60:17,0,42	0/0:26,0:26:57.18:0,57,872	0/1:10,0:11:35.05:96,0,35	1/1:22,0:21:7.81:324,8,0	1/1:6,0:6:18.03:187,18,0
chr10	44389128	.	TTGTGTG	T	6745.12	PASS	AB=0.875;AC=28;AF=0.500;AN=56;BaseQRankSum=6.459;DP=657;FS=26.233;HRun=0;HaplotypeScore=243.1100;InbreedingCoeff=0.7330;MQ=47.24;MQ0=18;MQRankSum=-8.884;QD=21.14;ReadPosRankSum=0.333;VQSLOD=3.0078;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:23,11:36:45.09:528,45,0	0/0:5,0:7:14.30:0,14,186	0/0:38,0:10:1.55:0,2,22	0/0:42,0:13:9.03:0,9,133	1/1:9,17:26:55.25:609,55,0	0/0:31,0:31:78.12:0,78,2061	0/0:27,0:30:69.23:0,69,1843	0/1:41,0:40:34.54:35,0,147	0/0:21,0:21:42.13:0,42,1215	0/0:15,0:35:71.25:0,71,889	0/0:3,0:24:46.99:0,47,501	1/1:3,10:14:29.78:491,30,0	1/1:6,6:12:27.06:508,27,0	1/1:10,10:21:44.68:653,45,0	0/0:5,0:17:38.77:0,39,399	0/0:6,1:23:14.67:0,15,347	0/0:17,0:30:46.47:0,46,591	0/0:5,0:9:8.70:0,9,178	1/1:16,7:20:0.68:406,1,0	1/1:13,10:23:47.81:662,48,0	1/1:20,3:23:16.93:142,17,0	1/1:7,7:15:1.52:318,2,0	1/1:16,10:26:44.68:674,45,0	1/1:13,3:16:8.78:109,9,0	0/0:8,0:27:40.96:0,41,465	0/1:8,4:12:28.65:330,0,29	1/1:11,12:23:40.06:926,40,0	1/1:1,5:6:18.06:354,18,0
chr10	44389314	.	CCTGGTCTACAGAGTGAGTTA	C	14397.63	PASS	AC=26;AF=0.481;AN=54;BaseQRankSum=11.994;DP=451;FS=5.500;HRun=0;HaplotypeScore=249.0551;InbreedingCoeff=0.9660;MQ=66.28;MQ0=0;MQRankSum=-11.667;QD=86.73;ReadPosRankSum=3.484;VQSLOD=4.0497;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,11:16:15.05:729,15,0	0/0:10,0:10:30.10:0,30,2251	0/0:21,0:15:39:0,39,2395	0/0:28,0:28:73.70:0,74,4629	1/1:1,12:13:24.08:1203,24,0	0/0:23,0:23:69.24:0,69,6246	0/0:16,0:16:48.14:0,48,3939	0/0:27,0:27:63.20:0,63,4350	0/0:20,0:20:57.20:0,57,4983	0/0:20,0:20:54.19:0,54,4461	0/0:18,0:18:51.18:0,51,4312	1/1:0,9:9:8.19:501,8,0	1/1:0,7:7:18.06:1007,18,0	1/1:1,6:7:9.03:503,9,0	0/0:28,0:28:69.24:0,69,5738	0/0:13,0:13:33.11:0,33,3088	0/0:20,0:20:60.21:0,60,4891	0/0:20,0:20:57.20:0,57,5176	1/1:4,8:11:24.02:558,24,0	1/1:3,19:22:48.12:2536,48,0	1/1:0,9:9:9.03:373,9,0	1/1:1,11:12:18.06:1007,18,0	1/1:1,12:13:27.09:1508,27,0	1/1:3,8:11:15.05:839,15,0	0/0:21,0:21:54.16:0,54,4658	1/1:0,16:16:45.14:1789,45,0	1/1:2,17:19:33.11:1845,33,0	./.
chr10	44389352	.	A	AC	4358.86	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-9.064;DP=456;FS=0.413;HRun=2;HaplotypeScore=120.8978;InbreedingCoeff=0.9452;MQ=65.78;MQ0=0;MQRankSum=5.459;QD=38.24;ReadPosRankSum=3.014;VQSLOD=4.3989;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:36.11:0,36,443	0/0:15,0:15:45.14:0,45,557	0/0:5,0:6:6.02:0,6,74	0/0:26,0:23:58.05:0,58,557	0/0:11,0:11:29.96:0,30,330	0/0:25,0:25:75.20:0,75,894	0/0:18,0:18:51.14:0,51,618	0/0:25,0:25:72.18:0,72,839	0/0:21,0:21:63.18:0,63,757	1/1:0,19:19:57.17:781,57,0	1/1:0,16:16:45.15:645,45,0	0/0:10,0:10:30.09:0,30,369	0/0:15,0:15:42.13:0,42,518	0/0:10,0:10:21:0,21,240	1/1:1,25:26:60.20:863,60,0	1/1:1,18:19:48.16:690,48,0	0/0:22,0:22:66.21:0,66,817	1/1:0,19:19:54.18:776,54,0	0/0:14,0:14:42.08:0,42,490	0/0:24,0:24:72.17:0,72,868	0/0:6,0:6:9.03:0,9,111	0/0:9,0:9:24.03:0,24,278	0/0:20,0:20:56.99:0,57,645	0/0:13,0:13:21.39:0,21,340	1/1:0,15:15:42.14:604,42,0	0/0:15,0:15:42.13:0,42,518	0/0:16,0:15:42.04:0,42,481	0/0:2,0:2:6.02:0,6,74
chr10	44392040	.	T	TAAG	23862.52	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-13.078;DP=617;FS=3.490;HRun=0;HaplotypeScore=73.7321;InbreedingCoeff=0.9823;MQ=86.21;MQ0=0;MQRankSum=-8.995;QD=53.74;ReadPosRankSum=2.751;VQSLOD=7.3274;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,28:34:75.26:1699,75,0	0/0:10,0:10:30.10:0,30,499	0/0:24,0:24:65.99:0,66,1023	0/0:24,0:24:63.21:0,63,1029	1/1:2,15:18:44.91:831,45,0	0/0:16,0:16:48.16:0,48,796	0/0:27,0:27:75.26:0,75,1249	0/0:28,0:28:84.24:0,84,1284	0/0:27,0:27:75.24:0,75,1224	1/1:3,22:26:69.19:1494,69,0	1/1:1,16:16:42.06:869,42,0	1/1:1,23:24:57.20:1291,57,0	1/1:2,13:17:27.09:582,27,0	1/1:1,16:19:45.15:1019,45,0	1/1:2,26:28:75.26:1699,75,0	1/1:3,26:30:78.21:1668,78,0	0/0:17,0:17:45.15:0,45,743	1/1:1,18:19:51.18:1154,51,0	1/1:4,19:23:66.23:1494,66,0	1/1:3,23:26:65.99:1336,66,0	1/1:3,19:23:60.16:1311,60,0	1/1:3,13:17:38.98:749,39,0	1/1:2,14:17:29.95:516,30,0	1/1:1,17:18:39.09:836,39,0	1/1:1,21:22:54.19:1221,54,0	1/1:4,29:33:93.32:2106,93,0	1/1:1,28:30:84.20:1851,84,0	1/1:0,3:3:6.02:136,6,0
chr10	44392368	.	GCAAGAGA	G	5864.55	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=12.366;DP=511;FS=8.525;HRun=0;HaplotypeScore=122.1472;InbreedingCoeff=0.9901;MQ=89.50;MQ0=0;MQRankSum=-13.176;QD=70.66;ReadPosRankSum=1.221;VQSLOD=4.6783;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,102,3861	0/0:10,0:10:30.10:0,30,1183	0/0:20,0:20:57.20:0,57,2178	0/0:23,0:23:63.16:0,63,2419	0/0:16,0:16:45.15:0,45,1780	0/0:19,0:19:51.17:0,51,2087	0/0:11,0:11:33.10:0,33,1231	0/0:30,0:30:84.29:0,84,3337	0/0:19,0:19:57.20:0,57,2215	1/1:1,10:11:30.10:774,30,0	1/1:1,13:14:36.12:969,36,0	0/0:15,0:15:45.14:0,45,1672	0/0:21,0:21:63.22:0,63,2403	0/0:19,0:19:57.20:0,57,2309	1/1:0,20:20:60.21:1616,60,0	1/1:2,17:19:48.16:1293,48,0	0/0:29,0:29:87.30:0,87,3477	1/1:0,4:4:12.04:323,12,0	0/0:22,0:22:63.22:0,63,2563	0/0:17,0:17:48.16:0,48,1833	0/0:24,0:24:72.25:0,72,2950	0/0:13,0:13:36.12:0,36,1473	0/0:15,0:15:42.09:0,42,1658	0/0:25,0:25:75.26:0,75,3000	1/1:1,14:15:33.11:889,33,0	0/0:18,0:18:51.17:0,51,1980	0/0:21,0:21:63.19:0,63,2142	0/0:5,0:5:15.05:0,15,614
chr10	44395386	.	T	TA	1834.57	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-7.162;DP=425;FS=2.442;HRun=8;HaplotypeScore=43.0458;InbreedingCoeff=0.9773;MQ=74.99;MQ0=0;MQRankSum=-4.165;QD=25.84;ReadPosRankSum=0.153;VQSLOD=4.0918;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:39:0,39,356	0/0:11,0:11:23.93:0,24,206	0/0:13,0:14:35.69:0,36,312	0/0:11,0:11:23.78:0,24,198	0/0:18,0:18:38.99:0,39,352	0/0:18,0:18:41.98:0,42,380	0/0:17,0:17:42.01:0,42,384	0/0:25,0:25:56.98:0,57,513	0/0:14,0:14:35.99:0,36,324	0/0:19,0:18:39:0,39,357	0/0:16,0:16:39:0,39,357	1/1:0,6:6:15.04:173,15,0	1/1:1,7:8:21.06:242,21,0	1/1:0,8:8:24.07:277,24,0	0/0:14,0:14:36.01:0,36,330	0/0:13,0:13:30.01:0,30,274	0/0:18,0:18:48.03:0,48,439	0/0:20,0:20:53.98:0,54,486	0/0:29,0:29:69.01:0,69,630	0/0:19,0:19:38.98:0,39,357	0/0:9,0:9:17.99:0,18,160	1/1:3,13:16:33.06:366,33,0	1/1:2,16:18:48.10:539,48,0	1/1:1,14:15:14.66:423,15,0	0/0:12,0:12:30:0,30,275	0/0:18,0:18:42:0,42,384	0/0:18,0:18:51.02:0,51,467	0/0:4,0:4:9:0,9,82
chr10	44396333	.	C	CA	8276.42	PASS	AB=1.000;AC=41;AF=0.732;AN=56;BaseQRankSum=-3.562;DP=482;FS=0.904;HRun=9;HaplotypeScore=72.9216;InbreedingCoeff=0.8100;MQ=88.97;MQ0=0;MQRankSum=-2.595;QD=23.38;ReadPosRankSum=1.867;VQSLOD=5.7303;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,21:26:66.13:708,66,0	0/0:8,0:8:24:0,24,208	0/0:25,0:27:3.60:0,4,199	0/1:13,0:14:16.22:16,0,81	1/1:8,21:29:54.15:597,54,0	0/0:19,0:19:50.97:0,51,443	0/0:16,0:16:32.99:0,33,286	0/0:26,0:26:59.94:0,60,516	0/0:11,0:11:32.99:0,33,286	1/1:6,21:28:69.18:759,69,0	1/1:6,18:25:56.89:577,57,0	1/1:5,14:19:45.08:484,45,0	1/1:4,8:12:24.06:265,24,0	1/1:5,10:15:13.05:370,13,0	1/1:1,10:11:27.07:299,27,0	1/1:3,10:13:33.07:352,33,0	0/0:21,0:21:47.98:0,48,417	1/1:7,8:15:33.09:364,33,0	1/1:2,13:15:13.03:361,13,0	1/1:6,22:28:72.07:750,72,0	1/1:3,4:7:12.03:133,12,0	1/1:6,21:27:57.11:617,57,0	1/1:3,18:21:51.05:529,51,0	1/1:1,2:3:6.02:66,6,0	1/1:3,11:14:36.09:392,36,0	1/1:6,9:15:30.08:331,30,0	1/1:6,9:15:3.94:246,4,0	1/1:1,1:2:6:58,6,0
chr10	44396381	.	AT	A	1601.68	PASS	AB=1.000;AC=31;AF=0.554;AN=56;BaseQRankSum=-0.271;DP=430;FS=1.396;HRun=14;HaplotypeScore=80.9539;InbreedingCoeff=0.8330;MQ=67.83;MQ0=2;MQRankSum=-0.282;QD=7.18;ReadPosRankSum=2.770;VQSLOD=3.0221;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:33:70.46:0,70,495	1/1:1,1:8:15.19:56,15,0	0/0:15,0:14:3.55:0,4,98	0/1:17,0:12:4.44:4,0,20	0/0:25,1:26:36.21:0,36,461	0/0:13,2:17:0.55:0,1,264	0/0:9,1:12:6.07:0,6,167	1/1:11,17:28:44.42:303,44,0	0/0:14,1:15:38.79:0,39,328	1/1:11,10:22:32.34:213,32,0	1/1:6,6:14:21.78:135,22,0	1/1:6,0:13:16.25:47,16,0	1/1:2,0:8:12:35,12,0	1/1:5,0:14:25.10:77,25,0	1/1:4,6:10:20.79:142,21,0	1/1:1,7:8:23.79:163,24,0	1/1:4,0:21:32.57:94,33,0	1/1:3,7:10:20.83:144,21,0	0/0:16,0:21:39.94:0,40,217	0/0:15,0:25:41.62:0,42,228	0/0:5,0:9:8.96:0,9,53	1/1:4,1:13:17.19:62,17,0	1/1:3,0:16:26.48:76,26,0	1/1:1,0:5:6.11:18,6,0	1/1:1,15:16:35.66:246,36,0	0/0:9,0:14:28.92:0,29,169	0/0:7,0:13:31.87:0,32,193	0/0:1,0:3:8.52:0,9,43
chr10	44396592	.	A	ATTT	5403.50	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=6.171;DP=464;FS=4.641;HRun=10;HaplotypeScore=71.4487;InbreedingCoeff=0.8985;MQ=73.85;MQ0=1;MQRankSum=-1.845;QD=21.61;ReadPosRankSum=-0.308;VQSLOD=2.9369;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,0:30:62.76:479,63,0	0/0:9,0:9:24.02:0,24,277	0/0:17,0:17:25.72:0,26,302	0/1:11,0:11:25.90:26,0,173	1/1:4,1:26:47.48:422,47,0	0/0:15,0:15:39.06:0,39,447	0/0:14,0:14:36.07:0,36,425	0/0:19,0:19:45.04:0,45,509	0/0:19,0:19:54.09:0,54,604	0/0:23,0:25:47.93:0,48,535	0/0:25,0:25:66.16:0,66,790	1/1:1,8:11:17.91:311,18,0	1/1:3,8:11:27.09:503,27,0	1/1:3,9:12:21.07:404,21,0	0/0:13,0:13:36.11:0,36,438	0/0:16,0:17:51.08:0,51,590	0/0:18,0:18:48.12:0,48,584	0/0:4,0:4:9.01:0,9,107	1/1:5,0:24:56.80:454,57,0	1/1:3,0:32:84.93:658,85,0	1/1:1,0:7:14.94:114,15,0	1/1:0,6:8:21.01:312,21,0	1/1:5,13:19:36.12:693,36,0	1/1:1,6:7:9.03:173,9,0	0/0:19,0:19:48.74:0,49,597	1/1:1,0:16:11.38:330,11,0	1/1:3,0:31:56.71:433,57,0	1/1:0,0:4:11.95:91,12,0
chr10	44398313	.	CA	C	4754.35	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=9.122;DP=668;FS=5.260;HRun=5;HaplotypeScore=85.1085;InbreedingCoeff=0.9988;MQ=70.49;MQ0=0;MQRankSum=1.482;QD=31.91;ReadPosRankSum=2.718;VQSLOD=5.4825;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:31:74.05:0,74,1114	0/0:13,0:13:39.13:0,39,534	0/0:17,0:17:35.57:0,36,586	0/0:16,0:16:23.05:0,23,376	0/0:36,0:35:96.30:0,96,1294	0/0:24,0:24:66.22:0,66,903	0/0:17,0:17:45.15:0,45,616	0/0:31,0:31:90.29:0,90,1218	0/0:24,0:24:72.24:0,72,984	1/1:2,31:32:90.26:1021,90,0	1/1:2,25:27:78.22:882,78,0	0/0:25,0:25:72.23:0,72,968	0/0:21,0:21:60.19:0,60,807	0/0:21,0:21:60.19:0,60,805	1/1:0,20:20:60.17:681,60,0	1/1:1,21:22:22.14:640,22,0	0/0:19,0:19:54.13:0,54,699	1/1:1,26:27:75.21:851,75,0	0/0:17,0:16:45.15:0,45,616	0/0:37,0:36:99:0,108,1462	0/0:22,0:22:66.18:0,66,881	0/0:34,0:33:99:0,99,1336	0/0:27,0:27:72.22:0,72,967	0/0:15,0:15:42.12:0,42,557	1/1:0,20:20:60.17:681,60,0	0/0:19,0:19:54.18:0,54,739	0/0:40,0:40:99:0,111,1518	0/0:13,0:13:39.13:0,39,532
chr10	44398576	.	T	TC	44.89	PASS	AB=0.759;AC=1;AF=0.018;AN=56;BaseQRankSum=5.780;DP=706;FS=33.516;HRun=0;HaplotypeScore=62.4372;InbreedingCoeff=-0.0183;MQ=58.59;MQ0=9;MQRankSum=-4.625;QD=2.04;ReadPosRankSum=1.554;VQSLOD=0.7848;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:20:57.16:0,57,776	0/0:15,0:15:45.11:0,45,594	0/0:16,0:16:45.12:0,45,583	0/0:17,0:15:45.07:0,45,567	0/0:38,0:38:99:0,111,1533	0/0:26,0:24:66.20:0,66,892	0/0:13,0:12:36.12:0,36,503	0/0:29,0:29:87.28:0,87,1202	0/0:23,0:18:54.18:0,54,753	0/0:26,4:27:36.31:0,36,961	0/0:24,2:26:48.49:0,48,977	0/0:17,0:13:39.12:0,39,528	0/0:19,0:16:45.15:0,45,629	0/0:26,0:21:63.20:0,63,863	0/0:34,2:29:87.24:0,87,1177	0/0:27,7:22:31.79:0,32,714	0/0:21,0:21:57.16:0,57,763	0/1:15,7:21:99:119,0,527	0/0:24,0:22:66.21:0,66,907	0/0:42,0:42:99:0,126,1760	0/0:19,0:19:57.17:0,57,765	0/0:26,0:26:75.23:0,75,1030	0/0:34,0:34:99:0,102,1388	0/0:17,0:15:42.11:0,42,566	0/0:30,5:34:34.91:0,35,1143	0/0:34,1:30:84.28:0,84,1174	0/0:32,0:28:84.24:0,84,1122	0/0:9,0:9:24.02:0,24,314
chr10	44398577	.	TGA	T	54.11	PASS	AB=0.759;AC=1;AF=0.018;AN=56;BaseQRankSum=5.836;DP=700;FS=33.308;HRun=0;HaplotypeScore=74.4486;InbreedingCoeff=-0.0183;MQ=58.70;MQ0=9;MQRankSum=-4.631;QD=2.46;ReadPosRankSum=1.465;VQSLOD=0.2093;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:20:60.18:0,60,1141	0/0:14,0:14:42.14:0,42,839	0/0:15,0:15:42.09:0,42,740	0/0:17,0:15:42.14:0,42,777	0/0:37,0:37:99:0,111,2204	0/0:27,0:25:75.24:0,75,1411	0/0:14,0:13:39.12:0,39,730	0/0:29,0:29:87.30:0,87,1726	0/0:23,0:18:54.19:0,54,1062	0/0:27,4:28:37.36:0,37,1423	0/0:24,2:26:43.40:0,43,1403	0/0:16,0:12:36.12:0,36,719	0/0:19,0:16:45.15:0,45,898	0/0:26,0:21:63.22:0,63,1248	0/0:34,2:29:87.30:0,87,1710	0/0:25,7:21:37.41:0,37,1038	0/0:21,0:21:63.22:0,63,1228	0/1:15,7:21:99:129,0,820	0/0:23,0:21:63.21:0,63,1209	0/0:42,0:42:99:0,126,2407	0/0:18,0:18:54.19:0,54,1068	0/0:27,0:27:81.26:0,81,1568	0/0:34,0:34:99:0,99,1964	0/0:17,0:15:42.14:0,42,821	0/0:30,5:34:50.67:0,51,1672	0/0:34,1:30:87.30:0,87,1731	0/0:30,0:26:75.24:0,75,1427	0/0:9,0:9:24.08:0,24,449
chr10	44399165	.	A	AT	7422.44	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-13.274;DP=594;FS=1.954;HRun=9;HaplotypeScore=50.1600;InbreedingCoeff=0.9710;MQ=64.76;MQ0=39;MQRankSum=-1.108;QD=22.49;ReadPosRankSum=2.347;VQSLOD=5.6431;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,25:27:31.11:571,31,0	0/0:13,0:13:38.99:0,39,338	0/0:23,0:16:18.61:0,19,200	0/0:10,0:9:10.93:0,11,106	1/1:6,32:34:87.19:946,87,0	0/0:27,0:27:71.97:0,72,621	0/0:17,0:16:35.96:0,36,308	1/1:4,25:29:72.04:760,72,0	0/0:14,0:15:38.98:0,39,336	0/0:32,0:31:72.99:0,73,685	0/0:24,0:25:71.02:0,71,605	1/1:5,6:9:18.05:199,18,0	1/1:7,15:18:42.11:463,42,0	1/1:6,12:17:26.91:280,27,0	0/0:19,0:16:44.98:0,45,388	0/0:14,0:14:38.98:0,39,336	0/0:17,0:16:44.99:0,45,389	0/0:15,0:15:41.93:0,42,354	1/1:2,17:19:51.10:544,51,0	1/1:1,34:35:87.13:933,87,0	1/1:1,2:3:6.02:66,6,0	1/1:5,17:20:38.59:489,39,0	1/1:8,24:28:15.15:582,15,0	1/1:3,4:6:12.03:133,12,0	0/0:32,1:29:53.73:0,54,679	1/1:5,19:22:34.06:583,34,0	1/1:4,27:29:40.64:641,41,0	1/1:1,8:9:21.06:232,21,0
chr10	44402732	.	AGAG	A	4506.80	PASS	AB=0.944;AC=13;AF=0.232;AN=56;BaseQRankSum=7.831;DP=574;FS=1.925;HRun=0;HaplotypeScore=103.7570;InbreedingCoeff=0.9213;MQ=57.73;MQ0=0;MQRankSum=-1.574;QD=31.08;ReadPosRankSum=4.368;VQSLOD=4.8531;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:96.29:0,96,2094	0/0:7,0:7:21.07:0,21,473	0/0:28,0:27:57.54:0,58,1326	0/0:26,0:25:62.80:0,63,1313	0/0:20,0:20:51.17:0,51,1088	0/0:16,0:16:48.12:0,48,1030	0/0:23,0:23:63.17:0,63,1355	0/0:17,0:17:42.12:0,42,837	0/0:19,0:19:51.18:0,51,1133	1/1:1,19:20:57.19:948,57,0	1/1:1,21:22:36.05:565,36,0	0/0:18,0:18:54.19:0,54,1220	0/0:20,0:20:60.16:0,60,1286	0/0:19,0:19:54.14:0,54,1148	1/1:0,16:16:33.11:549,33,0	1/1:0,23:23:63.22:1047,63,0	0/1:16,1:17:4.80:5,0,857	1/1:1,16:17:42.14:699,42,0	0/0:23,0:23:69.22:0,69,1499	0/0:19,0:19:54.19:0,54,1211	0/0:19,0:19:51.18:0,51,1154	0/0:21,0:21:57.20:0,57,1258	0/0:20,0:20:54.12:0,54,1086	0/0:16,0:16:39.13:0,39,867	1/1:3,27:30:39.71:695,40,0	0/0:17,0:17:48.12:0,48,1038	0/0:35,0:35:99:0,105,2286	0/0:6,0:6:18.06:0,18,370
chr10	44403919	.	T	TTGGCTG	12130.38	PASS	AB=0.571;AC=27;AF=0.482;AN=56;BaseQRankSum=5.043;DP=550;FS=229.577;HRun=0;HaplotypeScore=149.8777;InbreedingCoeff=0.9023;MQ=68.73;MQ0=0;MQRankSum=-13.045;QD=60.65;ReadPosRankSum=-0.436;VQSLOD=0.5899;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:22,12:34:62.40:1996,62,0	0/0:14,0:14:42.14:0,42,935	0/0:25,0:25:63.16:0,63,1289	0/0:26,0:26:72.20:0,72,1527	1/1:2,5:7:15.05:532,15,0	0/0:20,0:20:51.12:0,51,1144	0/0:36,0:36:87.11:0,87,1806	0/0:31,0:31:84.23:0,84,1866	0/0:26,0:26:75.09:0,75,1567	0/0:31,0:31:87.28:0,87,1951	0/0:19,0:19:51:0,51,956	1/1:5,7:13:30.10:1057,30,0	1/1:7,8:15:36.12:1138,36,0	1/1:5,6:11:24.07:752,24,0	0/0:27,0:27:75.26:0,75,1772	0/0:29,0:29:81.11:0,81,1711	0/0:26,0:26:72.21:0,72,1649	0/0:20,0:20:54.19:0,54,1274	1/1:6,5:10:23.97:605,24,0	1/1:10,11:21:48.15:1474,48,0	1/1:8,7:16:12.04:384,12,0	1/1:8,3:12:21.06:571,21,0	1/1:6,8:15:36.10:924,36,0	1/1:3,7:10:9.03:302,9,0	0/0:20,0:20:54.15:0,54,1129	0/1:4,12:16:12.54:1285,0,13	1/1:9,8:17:39.07:1039,39,0	1/1:2,0:2:6.02:73,6,0
chr10	44405621	.	T	TTTC	14353.26	PASS	AB=0.726;AC=38;AF=0.679;AN=56;BaseQRankSum=11.863;DP=483;FS=14.972;HRun=0;HaplotypeScore=84.8725;InbreedingCoeff=0.7862;MQ=34.25;MQ0=26;MQRankSum=-12.500;QD=43.89;ReadPosRankSum=1.639;VQSLOD=5.2618;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,8:5:12.04:266,12,0	0/0:7,0:7:21.07:0,21,343	0/0:17,0:7:18.06:0,18,272	0/0:14,0:9:23.79:0,24,261	1/1:5,20:25:57.20:1245,57,0	0/0:23,0:23:63.21:0,63,1008	0/0:18,0:17:36.10:0,36,561	0/0:34,0:27:72.21:0,72,1106	0/0:20,0:20:60.20:0,60,958	1/1:5,10:11:30.10:667,30,0	1/1:6,19:25:63.13:1320,63,0	1/1:2,6:7:15.05:333,15,0	1/1:6,14:16:36.12:788,36,0	1/1:6,11:12:33.06:684,33,0	1/1:3,8:9:27.09:597,27,0	1/1:6,12:17:33.11:733,33,0	0/0:23,0:21:60.20:0,60,980	0/1:3,3:5:6.18:188,0,6	0/1:8,3:8:20.78:188,0,21	1/1:6,12:16:33.11:733,33,0	1/1:2,1:3:3.01:66,3,0	1/1:3,15:17:45.15:997,45,0	1/1:4,20:22:57.20:1264,57,0	1/1:0,3:3:6.02:133,6,0	1/1:3,18:18:45.15:1000,45,0	1/1:2,19:19:24.50:1167,25,0	1/1:10,30:33:84.29:1850,84,0	1/1:5,3:5:6.02:133,6,0
chr10	44405629	.	AT	A	7324.93	PASS	AB=0.636;AC=39;AF=0.696;AN=56;BaseQRankSum=14.342;DP=466;FS=10.260;HRun=5;HaplotypeScore=95.4028;InbreedingCoeff=0.8622;MQ=35.91;MQ0=10;MQRankSum=-12.163;QD=23.48;ReadPosRankSum=0.877;VQSLOD=3.3369;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,7:5:12.03:135,12,0	0/0:9,0:9:27.09:0,27,368	0/0:20,0:7:21.07:0,21,287	0/0:13,0:9:24.04:0,24,295	1/1:3,23:25:48.13:537,48,0	0/0:25,0:25:72.19:0,72,936	0/0:15,1:15:42.13:0,42,558	0/0:30,0:25:75.23:0,75,1008	0/0:18,0:18:54.18:0,54,739	1/1:0,13:12:36.10:406,36,0	1/1:3,24:27:57.12:641,57,0	1/1:0,7:6:15.04:169,15,0	1/1:1,18:17:39.11:440,39,0	1/1:2,13:12:33.09:371,33,0	1/1:2,11:11:24.07:268,24,0	1/1:0,13:13:36.10:404,36,0	0/0:23,0:21:25.32:0,25,673	0/1:3,4:5:7.52:90,0,8	1/1:4,5:5:12.03:136,12,0	1/1:1,15:14:30.08:338,30,0	1/1:1,2:3:3.01:34,3,0	1/1:2,18:18:45.13:506,45,0	1/1:1,23:21:57.16:634,57,0	1/1:0,3:3:6.02:67,6,0	1/1:1,19:17:45.13:507,45,0	1/1:2,21:21:57.14:631,57,0	1/1:2,39:34:81.23:909,81,0	1/1:0,4:3:9.03:102,9,0
chr10	44406508	.	CCA	C	8639.69	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=16.075;DP=420;FS=0.000;HRun=0;HaplotypeScore=132.5027;InbreedingCoeff=0.9542;MQ=80.55;MQ0=0;MQRankSum=-16.125;QD=34.70;ReadPosRankSum=5.051;VQSLOD=6.9429;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,17:21:45.97:581,46,0	0/0:10,0:10:30.10:0,30,609	0/0:22,0:22:59.17:0,59,1144	0/0:21,0:21:57.16:0,57,963	1/1:3,12:15:36.58:479,37,0	0/0:20,0:20:54.19:0,54,1097	0/0:30,0:30:87.30:0,87,1752	0/0:26,0:26:78.27:0,78,1580	0/0:23,0:23:69.24:0,69,1402	1/1:2,13:15:28.42:528,28,0	1/1:0,5:4:12.04:155,12,0	1/1:0,17:17:48.16:677,48,0	1/1:1,12:13:36.59:502,37,0	1/1:0,21:20:57.19:795,57,0	1/1:0,14:14:39.13:543,39,0	1/1:0,13:13:36.12:502,36,0	0/0:19,0:19:57.20:0,57,1158	1/1:1,5:6:12.04:167,12,0	1/1:0,12:9:27.09:379,27,0	1/1:1,15:13:39.13:539,39,0	1/1:2,9:11:20.53:292,21,0	1/1:1,15:15:45.15:616,45,0	1/1:0,9:8:21.07:296,21,0	1/1:0,9:9:12.04:166,12,0	1/1:0,10:10:30.10:417,30,0	1/1:0,12:11:33.11:462,33,0	1/1:0,12:12:36.12:501,36,0	1/1:0,1:1:3.01:41,3,0
chr10	44406964	.	CT	C	12961.45	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=14.662;DP=588;FS=2.393;HRun=3;HaplotypeScore=100.9075;InbreedingCoeff=0.9988;MQ=59.53;MQ0=7;MQRankSum=-1.348;QD=33.15;ReadPosRankSum=3.813;VQSLOD=4.9831;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,34:35:93.29:1151,93,0	0/0:13,0:13:36.12:0,36,511	0/0:23,0:16:48.04:0,48,621	0/0:26,0:17:47.49:0,47,630	1/1:1,20:20:57.18:706,57,0	0/0:25,0:25:72.24:0,72,1024	0/0:22,0:22:66.22:0,66,945	0/0:35,0:35:93.30:0,93,1314	0/0:29,0:29:87.26:0,87,1206	1/1:0,27:26:72.23:890,72,0	1/1:1,14:15:33.10:405,33,0	1/1:0,21:21:63.20:779,63,0	1/1:0,20:20:57.18:705,57,0	1/1:0,25:25:72.23:892,72,0	1/1:1,19:19:54.15:655,54,0	1/1:0,9:8:24.08:297,24,0	0/0:24,0:23:69.23:0,69,987	1/1:1,11:12:30.09:371,30,0	1/1:1,15:15:39.12:483,39,0	1/1:0,15:15:42.13:520,42,0	1/1:4,30:34:84.26:1039,84,0	1/1:2,22:23:66.21:817,66,0	1/1:1,15:15:42.12:506,42,0	1/1:0,15:15:36.11:446,36,0	1/1:0,13:12:36.11:446,36,0	1/1:0,23:23:69.22:854,69,0	1/1:0,21:20:60.19:740,60,0	1/1:1,8:9:21.07:260,21,0
chr10	44407020	.	CCTCTGGT	C	14596.89	PASS	AB=0.636;AC=39;AF=0.696;AN=56;BaseQRankSum=14.327;DP=500;FS=18.009;HRun=0;HaplotypeScore=166.4165;InbreedingCoeff=0.8770;MQ=45.49;MQ0=3;MQRankSum=-13.525;QD=44.91;ReadPosRankSum=3.993;VQSLOD=3.6567;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,18:29:51.17:1128,51,0	0/0:7,0:7:15.05:0,15,580	0/0:15,0:15:36.59:0,37,1268	0/0:30,0:24:69.24:0,69,2248	1/1:4,14:18:36.12:791,36,0	0/0:23,0:23:60.21:0,60,2189	0/0:18,0:18:42.13:0,42,1492	0/0:33,0:33:75.26:0,75,2742	0/0:27,0:27:72.25:0,72,2691	1/1:4,12:16:39.13:961,39,0	1/1:5,5:10:15.05:345,15,0	1/1:1,14:15:42.14:1035,42,0	1/1:11,11:21:33.11:788,33,0	1/1:3,13:15:36.11:801,36,0	1/1:5,19:23:45.15:1109,45,0	1/1:1,17:16:42.14:1035,42,0	0/0:21,0:21:48.15:0,48,1740	0/1:3,4:7:13.58:300,0,14	1/1:8,9:14:24.05:501,24,0	1/1:3,9:12:30.09:619,30,0	1/1:10,13:23:30.10:651,30,0	1/1:7,9:16:27.09:628,27,0	1/1:1,10:10:27.09:586,27,0	1/1:7,5:12:9.03:222,9,0	1/1:3,14:16:42.14:961,42,0	1/1:2,10:12:30.10:738,30,0	1/1:4,22:23:54.19:1331,54,0	1/1:3,0:3:3.01:67,3,0
chr10	44407021	.	CTCTGGT	C	6251.18	PASS	AB=0.987;AC=24;AF=0.429;AN=56;BaseQRankSum=15.500;DP=504;FS=11.934;HRun=0;HaplotypeScore=185.2594;InbreedingCoeff=-0.1540;MQ=45.67;MQ0=2;MQRankSum=-15.253;QD=19.41;ReadPosRankSum=9.632;VQSLOD=2.5107;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:29:99:435,0,178	0/0:7,0:7:18.06:0,18,602	0/0:15,0:16:42.46:0,42,1415	0/0:32,0:25:75.21:0,75,2478	0/1:18,0:18:1.24:331,0,1	0/0:23,0:23:69.23:0,69,2352	0/0:19,0:19:54.18:0,54,1728	0/0:35,0:35:99:0,105,3261	0/0:27,0:27:81.28:0,81,2794	0/1:14,1:15:28.53:433,0,29	0/1:10,0:10:53.21:139,0,53	1/1:15,0:15:7.99:479,8,0	0/1:20,2:21:99:328,0,205	0/1:16,0:15:46.66:331,0,47	0/1:24,0:23:78.74:495,0,79	1/1:18,0:16:7.95:478,8,0	0/0:23,0:23:66.20:0,66,2045	0/1:7,0:7:66.10:129,0,66	0/1:16,0:14:99:207,0,110	0/1:12,0:12:38.93:226,0,39	0/1:23,0:23:99:235,0,201	0/1:15,1:16:78.57:263,0,79	1/1:11,0:10:23.69:253,24,0	0/1:12,0:12:92.72:93,0,93	1/1:17,0:16:37.06:441,37,0	0/1:12,0:12:24.86:331,0,25	0/1:25,0:22:47.63:601,0,48	0/1:3,0:3:20.60:21,0,50
chr10	44407245	.	CTT	C	1271.97	PASS	AB=0.680;AC=16;AF=0.286;AN=56;BaseQRankSum=4.708;DP=439;FS=3.372;HRun=15;HaplotypeScore=63.0141;InbreedingCoeff=0.7557;MQ=51.47;MQ0=21;MQRankSum=0.116;QD=9.64;ReadPosRankSum=6.149;VQSLOD=1.6535;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,10:16:14.94:132,15,0	0/1:4,1:5:14.40:14,0,110	0/0:19,0:3:3.01:0,3,41	0/0:13,0:3:5.45:0,5,28	1/1:6,14:19:13.53:245,14,0	0/0:19,0:19:42.01:0,42,489	0/0:12,0:17:26.56:0,27,305	0/0:20,0:13:17.21:0,17,144	0/0:12,0:12:30.04:0,30,340	0/0:21,0:32:62.94:0,63,630	0/0:4,0:13:29.95:0,30,288	0/0:16,0:16:29.97:0,30,343	0/0:7,0:7:17.54:0,18,211	0/0:15,0:15:30.01:0,30,346	0/0:5,0:13:21.01:0,21,195	0/0:7,0:9:12.02:0,12,125	0/0:12,0:14:20.52:0,21,227	0/0:9,0:18:21.06:0,21,254	1/1:4,6:8:5.79:97,6,0	1/1:5,17:23:32.60:327,33,0	0/1:1,7:9:6.32:42,0,6	0/0:8,0:11:29.56:0,30,342	0/0:25,0:24:48.05:0,48,590	0/0:10,0:10:27.07:0,27,350	0/0:9,0:15:18.03:0,18,192	1/1:6,7:13:20.45:164,20,0	1/1:3,14:19:29.55:292,30,0	1/1:1,8:14:10.93:150,11,0
chr10	44409324	.	CA	C	12630.31	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=10.575;DP=602;FS=2.112;HRun=6;HaplotypeScore=58.0394;InbreedingCoeff=0.9896;MQ=59.36;MQ0=2;MQRankSum=4.947;QD=28.58;ReadPosRankSum=6.486;VQSLOD=4.7776;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,30:32:78.19:838,78,0	0/0:10,0:10:27.09:0,27,355	0/0:15,0:11:33.11:0,33,424	0/0:8,0:6:9.03:0,9,118	1/1:2,37:39:99:1096,102,0	0/0:17,0:17:45.15:0,45,592	0/0:18,0:17:48.11:0,48,612	0/0:46,0:46:99:0,126,1613	0/0:19,0:17:48.16:0,48,632	1/1:3,26:29:78.18:830,78,0	1/1:0,20:20:60.15:645,60,0	1/1:0,10:9:27.07:290,27,0	1/1:0,15:15:45.11:484,45,0	1/1:0,17:17:45.11:484,45,0	1/1:0,18:18:51.13:548,51,0	1/1:0,17:17:48.12:516,48,0	0/0:27,0:25:60.13:0,60,740	1/1:3,15:17:36.09:387,36,0	1/1:0,12:12:36.09:387,36,0	1/1:1,28:29:69.16:742,69,0	1/1:0,17:17:51.13:548,51,0	1/1:1,32:33:93.23:1000,93,0	1/1:0,32:32:90.23:967,90,0	1/1:2,15:17:36.09:387,36,0	1/1:1,21:22:63.16:677,63,0	1/1:1,19:20:57.14:613,57,0	1/1:1,30:31:84.21:903,84,0	1/1:0,14:14:27.07:290,27,0
chr10	44410862	.	AT	A	12446.57	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=13.274;DP=573;FS=5.931;HRun=6;HaplotypeScore=56.9239;InbreedingCoeff=0.9834;MQ=69.57;MQ0=0;MQRankSum=-0.124;QD=28.55;ReadPosRankSum=3.379;VQSLOD=5.5686;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,27:28:75.19:806,75,0	0/0:15,0:15:45.15:0,45,592	0/0:12,0:12:27.08:0,27,341	0/0:7,0:7:12.04:0,12,156	1/1:1,37:38:99:1193,111,0	0/0:23,0:23:66.21:0,66,869	0/0:11,0:11:27.07:0,27,328	0/0:27,0:27:69.22:0,69,895	0/0:22,0:22:66.20:0,66,854	1/1:0,12:12:36.09:387,36,0	1/1:2,20:22:57.14:613,57,0	1/1:2,21:23:54.14:580,54,0	1/1:1,22:23:57.04:612,57,0	1/1:1,19:20:57.14:612,57,0	1/1:2,9:11:27.07:290,27,0	1/1:2,15:17:8.64:444,9,0	0/0:20,0:20:57.19:0,57,749	1/1:2,13:15:36.06:375,36,0	1/1:2,23:25:63.14:668,63,0	1/1:1,47:48:99:1419,132,0	1/1:0,19:19:54.14:580,54,0	1/1:1,21:22:60.15:643,60,0	1/1:0,21:21:63.16:677,63,0	1/1:0,9:9:24.06:258,24,0	1/1:4,12:16:33.08:355,33,0	1/1:1,22:23:66.17:709,66,0	1/1:0,33:33:81.20:871,81,0	1/1:0,11:11:33.08:355,33,0
chr10	44411884	.	A	AT	2052.90	PASS	AB=0.913;AC=13;AF=0.232;AN=56;BaseQRankSum=10.682;DP=470;FS=0.498;HRun=8;HaplotypeScore=54.5849;InbreedingCoeff=0.8691;MQ=77.37;MQ0=0;MQRankSum=1.094;QD=19.37;ReadPosRankSum=1.443;VQSLOD=3.3331;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:32.99:0,33,302	0/0:4,0:4:2.98:0,3,27	0/0:13,0:13:17.90:0,18,151	0/0:12,0:12:17.88:0,18,158	0/0:15,0:15:36.02:0,36,329	0/0:28,0:28:72.03:0,72,659	0/0:16,0:16:45:0,45,407	0/0:39,0:39:99:0,114,1020	0/0:7,0:7:14.93:0,15,123	1/1:2,15:17:45.12:511,45,0	1/1:0,12:12:29.96:313,30,0	0/0:13,0:13:27:0,27,247	0/0:21,0:21:60:0,60,538	0/0:21,0:21:53.97:0,54,484	1/1:3,12:15:33.57:381,34,0	1/1:1,16:17:45.13:519,45,0	0/0:15,0:15:29.99:0,30,269	1/1:2,7:9:22.28:231,22,0	0/0:29,0:29:65.99:0,66,593	0/0:18,0:18:39.01:0,39,357	0/1:19,2:21:9.28:9,0,421	0/0:16,0:16:35.48:0,35,306	0/0:10,0:10:18:0,18,165	0/0:10,0:10:30.02:0,30,274	1/1:4,11:15:24.07:277,24,0	0/0:25,0:25:65.82:0,66,579	0/0:21,0:20:57:0,57,518	0/0:11,0:11:24.01:0,24,220
chr10	44412019	.	G	GT	1306.66	PASS	AB=0.783;AC=37;AF=0.712;AN=52;BaseQRankSum=3.004;DP=232;FS=3.273;HRun=4;HaplotypeScore=126.0577;InbreedingCoeff=0.5980;MQ=38.31;MQ0=0;MQRankSum=-1.773;QD=7.10;ReadPosRankSum=2.419;VQSLOD=0.3848;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,7:8:13.71:65,14,0	0/0:9,0:9:18.13:0,18,109	./.	0/1:2,0:2:0.84:1,0,18	1/1:9,9:18:7:86,7,0	0/0:6,0:6:12.27:0,12,73	0/0:5,0:5:6.33:0,6,38	0/0:18,0:18:34.24:0,34,191	0/0:5,0:5:11.77:0,12,74	1/1:0,9:9:18.93:196,19,0	0/1:3,1:4:19.82:20,0,31	1/1:3,4:7:4.75:33,5,0	1/1:8,5:13:18.43:90,18,0	1/1:1,10:11:29.55:129,30,0	1/1:4,7:11:11.46:103,11,0	1/1:0,6:6:9.02:95,9,0	0/0:5,0:5:8.87:0,9,56	1/1:1,5:6:6.49:64,6,0	1/1:7,4:11:13.80:58,14,0	1/1:4,10:14:24.78:105,25,0	1/1:0,2:2:2.68:11,3,0	1/1:1,7:8:10.47:50,10,0	1/1:1,10:11:23.41:119,23,0	./.	0/1:2,9:11:25.73:26,0,26	1/1:5,11:16:33.46:159,33,0	1/1:5,5:10:10.37:43,10,0	1/1:3,3:6:6.11:32,6,0
chr10	44413857	.	TA	T	992.98	PASS	AC=10;AF=0.217;AN=46;BaseQRankSum=0.348;DP=503;FS=0.000;HRun=1;HaplotypeScore=26.7611;InbreedingCoeff=0.7985;MQ=16.75;MQ0=294;MQRankSum=2.132;QD=17.42;ReadPosRankSum=0.747;VQSLOD=3.5692;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:5:15.05:0,15,239	0/0:11,0:9:27.09:0,27,411	./.	./.	0/0:21,0:7:12.04:0,12,191	0/0:27,0:12:30.10:0,30,466	0/0:21,0:1:3.01:0,3,48	0/0:28,0:3:6.02:0,6,96	0/0:26,0:1:3.01:0,3,48	0/0:29,0:12:33.11:0,33,526	0/0:27,0:16:33.11:0,33,524	1/1:1,7:7:18.02:229,18,0	1/1:3,7:7:15.05:209,15,0	1/1:5,3:3:9.03:126,9,0	0/0:9,0:6:21.07:0,21,334	0/0:4,0:3:9.03:0,9,134	0/0:34,0:1:3.01:0,3,48	0/0:18,0:4:12.04:0,12,187	0/0:26,0:8:24.08:0,24,381	0/0:28,0:8:18.06:0,18,276	./.	1/1:7,8:8:21.07:293,21,0	1/1:7,9:9:21.07:293,21,0	./.	0/0:7,0:5:12.04:0,12,181	0/0:15,0:9:24.08:0,24,374	0/0:15,0:12:33.11:0,33,525	./.
chr10	44414393	.	C	CA	2164.46	PASS	AB=0.933;AC=43;AF=0.827;AN=52;BaseQRankSum=7.545;DP=417;FS=9.996;HRun=10;HaplotypeScore=129.5970;InbreedingCoeff=0.7563;MQ=50.54;MQ0=9;MQRankSum=-6.020;QD=6.50;ReadPosRankSum=-4.628;VQSLOD=-0.1101;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:24:20.90:104,21,0	1/1:2,5:7:9.02:96,9,0	0/0:14,0:4:2.95:0,3,25	0/0:25,0:6:8.85:0,9,61	1/1:20,0:19:22.81:119,23,0	0/0:17,0:17:29.94:0,30,246	0/0:19,0:18:30.64:0,31,287	1/1:12,0:21:35.30:185,35,0	0/1:12,1:14:3.23:3,0,173	1/1:6,0:9:11.53:64,12,0	1/1:6,0:10:8.05:37,8,0	1/1:10,0:9:11.98:60,12,0	1/1:5,0:6:11.40:58,11,0	1/1:13,0:13:19.57:105,20,0	1/1:9,0:10:17.10:87,17,0	1/1:8,0:12:22.74:113,23,0	1/1:2,21:23:23.49:455,23,0	1/1:8,0:10:16.37:84,16,0	1/1:20,0:16:20.30:119,20,0	1/1:20,0:17:28.23:147,28,0	./.	1/1:15,0:15:17.21:86,17,0	1/1:19,0:20:19.44:96,19,0	1/1:10,0:10:8.42:42,8,0	1/1:8,0:9:11.68:69,12,0	1/1:19,0:19:20.49:108,20,0	1/1:17,0:15:14.96:82,15,0	./.
chr10	44414421	.	TC	T	364.87	PASS	AB=0.981;AC=8;AF=0.143;AN=56;BaseQRankSum=4.645;DP=388;FS=8.466;HRun=1;HaplotypeScore=71.0318;InbreedingCoeff=0.4525;MQ=59.05;MQ0=8;MQRankSum=0.465;QD=6.40;ReadPosRankSum=-0.099;VQSLOD=-0.0553;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,1:20:15.44:0,15,318	0/0:5,0:5:12.02:0,12,120	0/0:24,0:9:7.35:0,7,123	0/0:30,0:9:5.89:0,6,156	0/0:23,0:23:26.98:0,27,435	0/0:17,0:17:48.16:0,48,750	0/0:15,0:16:45.03:0,45,616	0/0:33,0:32:77.70:0,78,782	0/0:11,0:11:33.11:0,33,515	0/1:11,0:10:27.21:41,0,27	1/1:12,1:12:9.91:101,10,0	0/0:5,0:5:8.13:0,8,94	0/0:10,0:10:17.84:0,18,174	0/0:10,0:9:19.22:0,19,200	0/1:11,1:11:0.22:127,0,0	1/1:8,0:8:19.88:117,20,0	0/0:25,0:25:48.78:0,49,522	0/1:8,0:8:5.24:98,0,5	0/0:13,0:11:20.15:0,20,190	0/0:17,0:17:22.16:0,22,337	0/0:6,0:6:7.23:0,7,90	0/0:9,0:9:18.02:0,18,173	0/0:16,0:15:30.06:0,30,318	0/0:6,0:6:14.89:0,15,130	0/1:5,0:5:8.48:22,0,8	0/0:20,0:19:48.48:0,48,473	0/0:12,1:13:11.40:0,11,260	0/0:1,0:1:2.99:0,3,24
chr10	44414496	.	CA	C	7493.95	PASS	AB=0.538;AC=39;AF=0.696;AN=56;BaseQRankSum=9.615;DP=470;FS=6.693;HRun=9;HaplotypeScore=53.2357;InbreedingCoeff=0.8429;MQ=68.60;MQ0=7;MQRankSum=-1.070;QD=22.24;ReadPosRankSum=2.675;VQSLOD=5.7534;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,31:31:81.04:741,81,0	0/0:9,0:9:24.07:0,24,277	0/0:8,0:7:21.06:0,21,234	0/0:12,0:9:0.36:0,0,232	1/1:3,19:22:51.02:467,51,0	0/0:21,0:21:60.16:0,60,680	0/0:18,0:15:42.12:0,42,485	0/0:25,0:23:57.11:0,57,627	0/0:12,0:12:33.10:0,33,381	1/1:4,12:16:36.02:329,36,0	1/1:3,14:17:42.02:384,42,0	1/1:1,12:13:36.02:330,36,0	1/1:2,12:15:35.04:308,35,0	1/1:2,9:11:27.01:247,27,0	1/1:0,10:10:30.02:275,30,0	0/1:1,6:7:13.61:144,0,14	0/0:27,0:27:72.21:0,72,831	1/1:2,13:15:18.81:309,19,0	1/1:4,9:11:3.32:175,3,0	1/1:2,16:18:45.02:412,45,0	1/1:0,20:20:54.03:494,54,0	1/1:3,16:18:45.02:412,45,0	1/1:4,8:12:24.48:220,24,0	1/1:1,24:25:63.03:577,63,0	1/1:1,9:10:24.01:220,24,0	1/1:4,28:32:87.03:792,87,0	1/1:3,21:24:60.03:549,60,0	1/1:0,6:6:12.01:110,12,0
chr10	44416303	.	G	GA	2000.49	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-4.016;DP=572;FS=4.695;HRun=10;HaplotypeScore=126.6851;InbreedingCoeff=0.9872;MQ=62.52;MQ0=0;MQRankSum=-0.942;QD=12.20;ReadPosRankSum=-2.520;VQSLOD=2.3031;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:86.83:0,87,705	0/0:6,0:7:17.02:0,17,129	0/0:16,1:19:10.78:0,11,253	0/0:16,0:14:16.35:0,16,116	0/0:18,0:19:43.99:0,44,350	0/0:32,0:32:65.84:0,66,541	0/0:16,0:16:41.92:0,42,342	1/1:12,21:31:51.13:543,51,0	0/0:18,0:19:20.47:0,20,364	1/1:27,0:27:64.58:345,65,0	1/1:21,0:21:51.94:284,52,0	0/0:11,0:11:29.97:0,30,246	0/0:19,0:19:44.94:0,45,369	0/0:22,0:22:62.88:0,63,517	1/1:26,1:26:33.24:292,33,0	1/1:23,0:23:57.79:337,58,0	0/0:21,0:21:50.91:0,51,418	1/1:17,0:17:35.23:216,35,0	0/0:15,0:15:35.89:0,36,293	0/0:22,0:22:47.85:0,48,387	0/0:21,0:21:54.41:0,54,444	0/0:24,0:23:42.38:0,42,346	0/0:17,0:17:38.95:0,39,320	0/0:24,0:24:63.35:0,63,518	1/1:16,0:16:31.81:182,32,0	0/0:22,0:22:37.92:0,38,400	0/0:19,0:18:45.41:0,45,370	0/0:9,0:9:23.97:0,24,197
chr10	44416313	.	A	AC	5153.47	PASS	AB=0.995;AC=31;AF=0.554;AN=56;BaseQRankSum=-2.640;DP=587;FS=7.158;HRun=1;HaplotypeScore=113.9338;InbreedingCoeff=0.3575;MQ=58.70;MQ0=1;MQRankSum=0.087;QD=11.66;ReadPosRankSum=-3.158;VQSLOD=1.8735;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:32,0:32:7.10:7,0,32	0/0:10,0:10:26.95:0,27,286	0/0:22,0:19:42.57:0,43,517	0/0:18,0:14:23.13:0,23,263	0/1:18,0:18:20.33:48,0,20	0/0:28,0:28:78.19:0,78,949	0/0:17,0:17:48.10:0,48,575	0/1:40,0:38:11.58:12,0,330	0/0:19,0:20:51.68:0,52,661	1/1:0,27:28:84.14:1030,84,0	1/1:2,20:22:57.10:752,57,0	1/1:10,0:10:0.35:1,0,0	1/1:20,0:20:12.46:121,12,0	0/1:25,0:25:24.14:82,0,24	1/1:3,24:26:56.01:773,56,0	1/1:1,25:26:60.20:815,60,0	0/0:22,0:22:57.16:0,57,707	1/1:1,17:18:36.12:489,36,0	1/1:15,0:15:8.54:52,9,0	0/1:20,0:20:0.64:61,0,1	1/1:20,0:20:0.30:40,0,0	0/1:19,0:18:8.06:35,0,8	0/1:19,0:19:13.18:81,0,13	1/1:28,0:28:8.93:155,9,0	1/1:1,14:15:33.11:446,33,0	0/1:20,1:21:0.14:82,0,0	0/1:19,0:18:28.33:71,0,28	0/0:8,0:8:6.64:0,7,18
chr10	44416457	.	GA	G	2797.59	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=13.758;DP=558;FS=0.914;HRun=4;HaplotypeScore=67.6783;InbreedingCoeff=0.9741;MQ=53.00;MQ0=6;MQRankSum=-11.822;QD=26.90;ReadPosRankSum=0.987;VQSLOD=2.7076;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,1:25:69.23:0,69,966	0/0:13,0:13:36.10:0,36,478	0/0:28,0:17:13.88:0,14,503	0/0:25,0:19:51.13:0,51,659	0/0:25,0:25:66.21:0,66,908	0/0:25,0:25:69.23:0,69,959	0/0:15,0:14:36.07:0,36,435	0/0:30,2:30:81.26:0,81,1099	0/0:15,0:15:39.11:0,39,514	1/1:1,18:19:54.16:647,54,0	1/1:2,18:20:48.15:575,48,0	0/0:16,0:16:45.15:0,45,628	0/0:16,0:16:48.16:0,48,667	0/0:25,0:25:72.24:0,72,1005	1/1:0,19:18:42.13:503,42,0	1/1:0,26:26:66.20:790,66,0	0/0:20,0:20:54.18:0,54,756	1/1:0,5:5:6.02:70,6,0	0/0:23,0:22:63.21:0,63,882	0/0:23,0:23:69.23:0,69,966	0/0:16,0:16:45.15:0,45,628	0/0:20,0:20:54.17:0,54,733	0/0:25,0:25:69.22:0,69,948	0/0:12,0:12:36.12:0,36,504	1/1:0,15:15:33.10:395,33,0	0/0:17,0:16:48.15:0,48,657	0/0:26,0:26:75.25:0,75,1047	0/0:11,0:11:33.11:0,33,462
chr10	44418087	.	G	GTT	3596.58	PASS	AB=0.579;AC=13;AF=0.232;AN=56;BaseQRankSum=-5.514;DP=567;FS=1.831;HRun=10;HaplotypeScore=72.7127;InbreedingCoeff=0.8473;MQ=71.67;MQ0=0;MQRankSum=2.598;QD=25.69;ReadPosRankSum=-0.727;VQSLOD=3.4733;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:84.12:0,84,847	0/0:12,0:12:30.06:0,30,305	0/0:17,0:18:17.54:0,18,165	0/0:5,0:6:14.61:0,15,110	0/0:21,0:22:47.83:0,48,470	0/0:19,0:19:45.09:0,45,458	0/0:25,0:25:56.99:0,57,555	0/1:6,0:22:76.53:116,0,77	0/0:17,0:17:45.07:0,45,458	1/1:4,7:15:26.21:349,26,0	1/1:5,11:19:39.76:480,40,0	0/0:23,0:24:56.79:0,57,554	0/0:19,0:19:51.10:0,51,518	0/0:12,0:12:30.04:0,30,305	1/1:2,18:23:52.64:699,53,0	1/1:3,13:18:2:363,2,0	0/0:35,0:36:98.68:0,99,970	1/1:1,19:21:54.18:807,54,0	0/0:23,0:23:47.98:0,48,483	0/0:27,0:27:60.10:0,60,609	0/0:16,0:18:41.56:0,42,389	0/0:19,0:22:47.54:0,48,451	0/0:16,0:17:50.85:0,51,500	0/0:25,0:25:72.14:0,72,719	1/1:2,18:22:54.18:783,54,0	0/0:20,0:20:48.07:0,48,488	0/0:22,0:21:48.07:0,48,488	0/0:6,0:6:11.98:0,12,122
chr10	44418760	.	G	GGT	856.75	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-6.160;DP=643;FS=5.945;HRun=0;HaplotypeScore=88.1170;InbreedingCoeff=0.9726;MQ=76.57;MQ0=2;MQRankSum=-3.669;QD=34.27;ReadPosRankSum=-1.028;VQSLOD=5.0457;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:68.44:0,68,828	1/1:2,4:6:12.04:195,12,0	0/0:35,0:35:17.22:0,17,652	0/0:30,0:27:35.40:0,35,382	0/0:18,0:18:39.12:0,39,476	0/0:23,0:23:45.14:0,45,550	0/0:29,0:29:40.15:0,40,730	0/0:39,0:40:72.05:0,72,847	0/0:24,0:24:60.19:0,60,733	0/0:28,0:28:57.18:0,57,696	0/0:13,0:13:24.08:0,24,294	0/0:21,0:23:53.83:0,54,615	0/0:24,0:24:66.21:0,66,807	0/0:14,0:14:36.11:0,36,440	0/0:27,0:27:63.19:0,63,757	0/0:19,0:19:51.16:0,51,623	1/1:1,18:19:48.16:779,48,0	0/0:28,0:28:63.16:0,63,754	0/0:20,0:20:45.13:0,45,540	0/0:15,0:16:26.90:0,27,295	0/0:36,0:36:78.20:0,78,916	0/0:8,0:8:18.06:0,18,220	0/0:21,0:21:57.15:0,57,672	0/0:24,0:24:63.20:0,63,770	0/0:40,0:40:84.26:0,84,1027	0/0:16,0:16:33.10:0,33,403	0/0:14,0:14:38.91:0,39,452	0/0:13,0:13:30.09:0,30,366
chr10	44419941	.	A	AC	1338.04	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-7.584;DP=745;FS=2.020;HRun=5;HaplotypeScore=74.5006;InbreedingCoeff=0.9955;MQ=90.80;MQ0=0;MQRankSum=-3.057;QD=29.09;ReadPosRankSum=2.504;VQSLOD=4.2049;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,132,1400	1/1:2,11:13:30.10:395,30,0	0/0:28,0:28:43.80:0,44,666	0/0:31,0:31:61.49:0,61,713	0/0:19,0:19:48.12:0,48,516	0/0:23,0:23:63.13:0,63,665	0/0:25,0:25:75.16:0,75,796	0/0:31,0:31:87.22:0,87,935	0/0:25,0:25:40.45:0,40,651	0/0:29,0:29:65.94:0,66,708	0/0:16,0:16:36.09:0,36,386	0/0:28,0:28:78.19:0,78,838	0/0:27,0:27:78.18:0,78,828	0/0:34,0:34:96.18:0,96,1003	0/0:35,0:35:99:0,99,1064	0/0:27,0:27:75.17:0,75,797	1/1:1,32:33:80.87:1065,81,0	0/0:21,0:21:63.12:0,63,664	0/0:23,0:23:63.10:0,63,645	0/0:21,0:20:53.91:0,54,549	0/0:47,0:46:99:0,138,1483	0/0:20,0:20:57.14:0,57,612	0/0:19,0:19:48.12:0,48,515	0/0:29,0:29:78.19:0,78,838	0/0:24,0:24:66.16:0,66,707	0/0:23,0:23:57.13:0,57,604	0/0:32,0:32:96.24:0,96,1031	0/0:8,0:8:18.04:0,18,193
chr10	44420845	.	CTGTT	C	7118.87	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=13.782;DP=666;FS=0.000;HRun=0;HaplotypeScore=112.7401;InbreedingCoeff=0.9785;MQ=82.39;MQ0=0;MQRankSum=-5.537;QD=50.13;ReadPosRankSum=1.982;VQSLOD=5.8703;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:75.21:0,75,1902	0/0:16,0:16:45.15:0,45,1213	0/0:21,0:21:24.93:0,25,1068	0/0:18,0:18:6:0,6,901	0/0:33,0:33:96.32:0,96,2504	0/0:26,0:26:69.24:0,69,1841	0/0:20,0:20:57.18:0,57,1483	0/0:26,0:26:72.25:0,72,1839	0/0:24,0:24:69.24:0,69,1846	1/1:2,34:36:99:1906,102,0	1/1:2,21:23:66.23:1213,66,0	0/0:23,0:23:63.22:0,63,1701	0/0:23,0:23:66.23:0,66,1756	0/0:17,0:17:48.16:0,48,1263	1/1:1,18:19:48.16:910,48,0	1/1:0,25:25:69.24:1309,69,0	0/0:38,0:38:99:0,108,2857	1/1:2,18:20:51.17:968,51,0	0/0:23,0:23:63.22:0,63,1644	0/0:40,0:40:99:0,114,2933	0/0:10,0:10:30.10:0,30,810	0/0:30,0:30:84.29:0,84,2234	0/0:20,0:20:57.20:0,57,1518	0/0:24,0:24:69.24:0,69,1835	1/1:0,19:19:45.07:814,45,0	0/0:28,0:28:78.27:0,78,2044	0/0:28,0:28:81.28:0,81,2127	0/0:11,0:11:33.11:0,33,891
chr10	44421560	.	T	TA	9029.99	PASS	AB=0.554;AC=42;AF=0.750;AN=56;BaseQRankSum=-1.216;DP=595;FS=4.816;HRun=9;HaplotypeScore=79.0658;InbreedingCoeff=0.8021;MQ=89.69;MQ0=0;MQRankSum=-2.465;QD=19.89;ReadPosRankSum=4.255;VQSLOD=5.4324;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,25:29:50.95:703,51,0	1/1:2,9:11:30.08:331,30,0	0/0:31,0:30:40.97:0,41,416	0/0:19,0:18:19.98:0,20,191	1/1:10,20:30:31.03:556,31,0	0/0:18,0:18:47.99:0,48,417	0/0:22,0:22:59.98:0,60,521	0/0:32,0:32:86.94:0,87,748	0/0:19,0:19:41.95:0,42,361	1/1:6,0:18:37.41:203,37,0	1/1:3,2:20:43.55:250,44,0	0/1:3,14:18:5.95:337,0,6	1/1:2,19:21:34.11:603,34,0	1/1:4,21:25:8.05:545,8,0	1/1:5,0:25:40.13:207,40,0	1/1:5,0:16:2.69:104,3,0	1/1:3,20:23:48.13:531,48,0	1/1:2,0:16:40.11:211,40,0	1/1:3,12:15:33.04:344,33,0	1/1:3,21:24:60.05:624,60,0	1/1:2,17:19:48.13:531,48,0	1/1:3,16:19:45.04:471,45,0	1/1:5,15:20:15.72:405,16,0	1/1:2,14:17:32.92:346,33,0	1/1:6,0:25:40.14:209,40,0	1/1:6,20:26:31.07:555,31,0	1/1:2,26:28:72.19:796,72,0	0/1:2,7:9:5.02:167,0,5
chr10	44421866	.	TA	T	8257.77	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=15.172;DP=687;FS=7.907;HRun=9;HaplotypeScore=77.4059;InbreedingCoeff=0.9852;MQ=76.21;MQ0=0;MQRankSum=-0.311;QD=23.13;ReadPosRankSum=3.114;VQSLOD=5.6477;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,147,1687	1/1:0,2:2:6:55,6,0	0/0:21,0:20:38.77:0,39,405	0/0:20,0:20:25.26:0,25,377	0/0:31,0:31:90.21:0,90,1000	0/0:18,0:18:48.11:0,48,540	0/0:22,0:22:60.16:0,60,675	1/1:5,22:27:66.02:604,66,0	0/0:21,0:21:54.16:0,54,623	1/1:1,18:19:51.02:467,51,0	1/1:2,16:18:48.02:439,48,0	1/1:3,17:20:48.02:439,48,0	1/1:1,23:24:69.03:632,69,0	1/1:4,22:26:60.02:549,60,0	1/1:1,30:31:84.04:769,84,0	1/1:3,30:33:52.43:734,52,0	1/1:3,33:36:90.04:824,90,0	1/1:4,16:20:39.02:357,39,0	0/0:22,0:22:51.15:0,51,588	0/0:27,0:27:78.23:0,78,900	0/0:35,0:35:90.25:0,90,1029	1/1:3,22:25:63.03:577,63,0	1/1:0,30:30:84.05:769,84,0	1/1:1,33:34:87.05:796,87,0	1/1:2,10:12:27.01:247,27,0	0/0:21,0:22:56.99:0,57,628	0/0:30,0:30:78.22:0,78,889	0/0:11,0:11:33.08:0,33,369
chr10	44423828	.	AACACACACACACAC	A	1362.84	PASS	AC=10;AF=0.192;AN=52;BaseQRankSum=3.498;DP=525;FS=7.387;HRun=0;HaplotypeScore=183.9510;InbreedingCoeff=0.6760;MQ=51.69;MQ0=32;MQRankSum=-0.853;QD=19.47;ReadPosRankSum=1.939;VQSLOD=2.2096;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:3.01:0,3,67	./.	0/0:26,0:12:15.05:0,15,309	0/0:23,0:5:8.99:0,9,180	0/0:19,0:19:5.99:0,6,48	0/0:22,0:22:24.08:0,24,1336	0/0:28,0:28:48.04:0,48,1961	0/0:24,0:21:27.09:0,27,1201	0/0:30,0:30:42.13:0,42,1851	0/0:24,0:23:39.12:0,39,1524	0/0:10,0:10:3.01:0,3,174	1/1:9,6:17:15.03:421,15,0	1/1:6,7:14:21.07:795,21,0	1/1:13,5:18:9.48:151,9,0	0/0:25,0:24:36.04:0,36,1442	0/0:28,0:27:39.13:0,39,2052	0/0:12,0:14:23.97:0,24,483	0/0:12,0:11:21.05:0,21,832	0/0:7,0:4:6.02:0,6,106	0/0:18,0:18:2.88:0,3,15	0/0:19,0:18:17.98:0,18,397	./.	1/1:6,2:8:3.01:49,3,0	1/1:9,3:9:6.02:96,6,0	0/0:19,0:18:15.05:0,15,932	0/0:18,0:19:17.86:0,18,303	0/0:22,0:22:3.79:0,4,336	0/0:3,0:4:3.01:0,3,38
chr10	44423864	.	CACACACAG	C	1776.36	PASS	AB=1.000;AC=17;AF=0.370;AN=46;BaseQRankSum=6.954;DP=679;FS=28.854;HRun=0;HaplotypeScore=178.6958;InbreedingCoeff=0.3833;MQ=36.90;MQ0=84;MQRankSum=0.073;QD=6.63;ReadPosRankSum=0.551;VQSLOD=1.3016;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:12,0:7:4.98:0,5,24	./.	./.	./.	0/0:30,0:26:24.04:0,24,519	0/0:41,0:39:16.87:0,17,667	0/0:34,0:31:44.46:0,44,732	0/0:29,0:29:36.10:0,36,683	0/0:31,0:27:41.02:0,41,598	0/0:14,0:14:3.01:0,3,75	0/1:31,0:29:81.88:109,0,82	0/1:26,0:23:78.52:252,0,79	1/1:20,0:16:2.74:46,3,0	0/0:37,0:33:25.01:0,25,494	0/0:31,0:27:39.58:0,40,789	0/1:24,0:18:47.50:92,0,47	0/0:15,0:10:15.05:0,15,335	1/1:18,0:15:21.28:170,21,0	1/1:5,0:26:3.01:55,3,0	0/1:22,0:12:75.28:192,0,75	0/0:29,0:26:0:0,0,1	./.	0/1:33,0:16:0:0,0,0	0/0:25,0:23:15.05:0,15,407	1/1:5,0:28:72.19:922,72,0	1/1:9,19:26:0.80:2,1,0	1/1:4,0:3:6:83,6,0
chr10	44423868	.	CACAG	C	917.51	PASS	AB=0.998;AC=21;AF=0.457;AN=46;BaseQRankSum=7.691;DP=683;FS=18.133;HRun=0;HaplotypeScore=161.8711;InbreedingCoeff=-0.0315;MQ=36.62;MQ0=84;MQRankSum=1.561;QD=2.23;ReadPosRankSum=1.684;VQSLOD=1.8163;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/0:12,0:7:3.43:0,3,20	./.	./.	./.	0/0:31,0:27:0.48:0,0,182	0/0:39,0:37:11.25:0,11,182	0/0:36,0:33:40.30:0,40,363	0/1:29,0:29:17.91:18,0,216	0/1:31,0:27:26.93:27,0,145	0/0:14,0:14:3:0,3,25	0/1:30,0:28:5.56:6,0,84	0/1:26,0:23:49.22:49,0,80	1/1:20,0:16:2.39:10,2,0	0/1:36,0:33:19.33:19,0,76	0/1:31,0:27:49.80:50,0,134	0/1:27,0:21:42.14:128,0,42	0/1:17,0:12:13.68:14,0,58	1/1:18,0:15:21.11:124,21,0	1/1:32,0:26:2.94:18,3,0	0/1:25,0:15:33.47:72,0,33	0/1:29,0:26:0.01:0,0,0	./.	0/0:35,0:18:0:0,0,0	0/0:14,11:23:14.97:0,15,123	1/1:31,0:29:71.70:481,72,0	0/1:24,0:22:0:0,0,0	1/1:4,0:3:5.89:38,6,0
chr10	44423894	.	G	GAC	976.03	PASS	AB=0.911;AC=19;AF=0.380;AN=50;BaseQRankSum=2.824;DP=686;FS=24.136;HRun=0;HaplotypeScore=179.6655;InbreedingCoeff=0.3718;MQ=36.62;MQ0=90;MQRankSum=5.016;QD=3.03;ReadPosRankSum=2.013;VQSLOD=1.3933;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:42,0:34:17.96:144,18,0	1/1:16,0:11:15:121,15,0	./.	./.	1/1:29,0:25:17.69:130,18,0	0/0:25,0:21:20.92:0,21,184	0/0:37,0:34:20.27:0,20,169	0/0:45,0:38:83.09:0,83,644	0/0:29,0:29:40.24:0,40,400	0/1:14,11:20:20.55:228,0,21	./.	0/0:32,0:30:32.79:0,33,317	0/0:29,0:26:43.02:0,43,358	0/0:22,0:18:5.92:0,6,40	0/0:31,0:28:4.97:0,5,46	0/1:16,13:25:27.09:44,0,27	0/1:26,0:20:33.09:33,0,36	0/1:13,0:9:15.14:15,0,19	0/0:18,0:14:13.62:0,14,68	1/1:38,0:34:14.97:122,15,0	0/1:24,0:14:20.10:20,0,47	0/0:25,0:20:5.85:0,6,50	0/1:11,0:8:0:0,0,0	0/0:40,0:23:8.97:0,9,71	0/0:18,1:17:3.83:0,4,45	0/1:35,0:31:9.01:56,0,9	1/1:25,0:23:17.95:145,18,0	1/1:8,0:7:7.68:90,8,0
chr10	44423908	.	GAC	G	979.16	PASS	AB=0.861;AC=17;AF=0.340;AN=50;BaseQRankSum=2.210;DP=651;FS=2.056;HRun=0;HaplotypeScore=161.6939;InbreedingCoeff=0.5068;MQ=38.21;MQ0=90;MQRankSum=3.275;QD=3.82;ReadPosRankSum=-3.015;VQSLOD=2.5135;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:38:33.09:0,33,577	0/0:16,0:11:20.77:0,21,394	./.	./.	0/0:26,0:21:18.06:0,18,340	0/0:20,0:16:15.03:0,15,255	0/0:37,0:35:35.67:0,36,569	0/0:31,0:24:47.57:0,48,679	0/0:28,0:28:18.88:0,19,784	0/1:22,0:18:82.09:82,0,171	./.	0/1:23,8:29:99:196,0,173	0/1:17,9:23:99:108,0,285	1/1:12,9:17:3.01:46,3,0	1/1:30,0:27:23.58:200,24,0	1/1:26,0:22:17:137,17,0	0/0:26,0:20:36.81:0,37,509	0/1:14,0:10:28.92:33,0,29	0/0:26,0:20:31.66:0,32,556	0/0:36,0:32:20.86:0,21,342	0/0:25,0:15:21.05:0,21,344	1/1:19,1:16:8.77:137,9,0	0/1:7,3:7:0:0,0,0	1/1:26,15:24:11.79:183,12,0	1/1:15,0:12:2.55:25,3,0	0/0:34,0:30:73.12:0,73,1054	0/0:25,0:23:36.07:0,36,644	0/0:10,0:8:9.43:0,9,366
chr10	44424093	.	A	AT	9052.55	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-11.731;DP=695;FS=29.122;HRun=6;HaplotypeScore=68.6625;InbreedingCoeff=0.9650;MQ=66.85;MQ0=0;MQRankSum=-1.301;QD=27.18;ReadPosRankSum=-0.874;VQSLOD=2.7456;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:84.19:0,84,857	0/0:10,0:10:27.06:0,27,275	0/0:11,0:11:24.05:0,24,245	0/0:11,0:11:18.01:0,18,173	0/0:33,0:33:87.18:0,87,880	0/0:30,0:30:75.17:0,75,765	0/0:24,0:24:63.13:0,63,642	1/1:8,31:39:65.66:1106,66,0	0/0:26,0:26:66.15:0,66,673	1/1:1,25:16:45.14:564,45,0	1/1:4,19:21:51.12:619,51,0	1/1:5,24:26:57.18:713,57,0	1/1:3,28:28:66.21:829,66,0	1/1:2,16:14:33.11:415,33,0	1/1:5,27:28:35.65:754,36,0	1/1:0,25:21:60.19:755,60,0	0/0:34,0:34:99:0,99,1001	1/1:1,20:21:57.18:717,57,0	0/0:22,0:22:57.07:0,57,561	0/0:24,0:24:72.16:0,72,735	0/0:20,0:20:57.13:0,57,580	1/1:1,24:23:57.14:694,57,0	1/1:3,25:23:63.20:792,63,0	1/1:1,19:20:51.16:642,51,0	1/1:2,14:14:36.12:453,36,0	0/0:37,3:40:0.66:0,1,874	0/0:38,0:37:99:0,99,999	0/0:9,0:9:24.05:0,24,245
chr10	44424463	.	C	CT	419.56	PASS	AC=6;AF=0.167;AN=36;BaseQRankSum=6.295;DP=384;FS=34.206;HRun=1;HaplotypeScore=71.7946;InbreedingCoeff=0.9345;MQ=83.40;MQ0=2;MQRankSum=-6.308;QD=15.54;ReadPosRankSum=0.106;VQSLOD=1.7454;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:78.25:0,78,1012	0/0:14,0:14:42.14:0,42,545	0/0:22,0:22:45.12:0,45,564	0/0:14,0:14:33.09:0,33,410	0/0:40,0:40:99:0,117,1490	0/0:14,0:14:42.14:0,42,545	0/0:18,0:18:54.18:0,54,700	./.	0/0:23,0:23:69.21:0,69,878	1/1:0,6:3:6.02:76,6,0	1/1:0,7:4:9.03:119,9,0	./.	./.	./.	./.	./.	0/0:25,0:25:75.23:0,75,958	./.	0/0:17,0:17:48.16:0,48,623	0/0:43,0:43:99:0,126,1594	0/0:18,0:18:51.15:0,51,646	./.	./.	./.	1/1:0,14:9:27.09:344,27,0	0/0:28,1:28:78.25:0,78,1010	0/0:31,0:31:84.27:0,84,1089	0/0:15,0:15:42.07:0,42,527
chr10	44425175	.	C	CACT	20012.09	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-5.086;DP=712;FS=15.772;HRun=0;HaplotypeScore=102.1079;InbreedingCoeff=0.9599;MQ=68.65;MQ0=2;MQRankSum=-5.661;QD=59.56;ReadPosRankSum=1.928;VQSLOD=5.7937;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,126,2222	0/0:11,0:11:33.09:0,33,551	0/0:17,0:16:42.12:0,42,693	0/0:17,0:14:26.27:0,26,473	0/0:34,0:34:99:0,99,1688	0/0:26,0:26:75.22:0,75,1265	0/0:18,0:18:54.17:0,54,913	1/1:1,24:24:72.23:1583,72,0	0/0:23,0:23:66.23:0,66,1155	1/1:6,21:27:19.31:1578,19,0	1/1:0,19:19:57.20:1345,57,0	1/1:3,30:33:84.29:1985,84,0	1/1:2,25:27:75.26:1771,75,0	1/1:0,22:22:63.22:1487,63,0	1/1:6,23:28:31.42:1518,31,0	1/1:0,28:29:84.29:1984,84,0	0/0:35,0:35:99:0,102,1737	1/1:3,13:16:0.28:743,0,0	0/0:20,0:20:57.18:0,57,955	0/0:38,0:38:99:0,111,1939	0/0:33,0:32:93.32:0,93,1641	1/1:4,26:31:72.25:1695,72,0	1/1:2,24:28:60.21:1415,60,0	1/1:1,23:24:69.24:1632,69,0	1/1:0,23:22:54.19:1276,54,0	0/0:24,0:24:72.25:0,72,1245	0/0:32,0:32:93.29:0,93,1583	0/0:4,0:4:12.04:0,12,212
chr10	44425967	.	GA	G	308.34	PASS	AB=0.798;AC=4;AF=0.071;AN=56;BaseQRankSum=4.884;DP=520;FS=0.000;HRun=1;HaplotypeScore=65.1465;InbreedingCoeff=-0.0866;MQ=59.71;MQ0=8;MQRankSum=-1.775;QD=5.32;ReadPosRankSum=-0.292;VQSLOD=0.0844;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:90.31:0,90,1436	0/0:7,0:7:21.07:0,21,336	0/0:20,0:10:26.98:0,27,373	0/0:19,0:12:32.84:0,33,458	0/0:17,0:16:42.14:0,42,671	0/0:24,0:23:57.19:0,57,911	0/0:25,0:25:75.22:0,75,1150	0/0:25,0:20:54.14:0,54,832	0/0:17,0:15:45.15:0,45,719	0/1:7,6:9:99:101,0,215	0/1:8,1:8:20.76:21,0,267	0/0:14,0:12:36.11:0,36,547	0/0:17,0:12:36.12:0,36,574	0/0:17,0:16:45.15:0,45,717	0/1:14,8:20:99:281,0,402	0/0:16,1:14:0.18:0,0,577	0/0:25,0:25:75.24:0,75,1167	0/0:13,0:13:39.13:0,39,617	0/0:20,0:17:51.12:0,51,759	0/0:16,0:16:48.16:0,48,767	0/0:36,0:36:99:0,108,1672	0/0:14,0:11:33.11:0,33,527	0/0:14,0:11:30.08:0,30,449	0/0:29,0:27:75.26:0,75,1199	0/1:12,2:11:11.73:12,0,401	0/0:25,0:18:54.18:0,54,862	0/0:15,0:13:39.13:0,39,623	0/0:5,0:5:15.05:0,15,240
chr10	44426001	.	T	TAC	8843.92	PASS	AB=0.533;AC=25;AF=0.446;AN=56;BaseQRankSum=4.906;DP=526;FS=19.633;HRun=0;HaplotypeScore=67.7511;InbreedingCoeff=0.9334;MQ=84.78;MQ0=5;MQRankSum=-2.469;QD=40.02;ReadPosRankSum=1.478;VQSLOD=4.5814;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,99,1509	0/0:6,0:6:15.05:0,15,230	0/0:26,0:26:72.24:0,72,1079	0/0:24,0:24:69.23:0,69,1044	0/0:18,1:18:42.14:0,42,638	0/0:20,0:19:60.20:0,60,918	0/0:20,0:20:54.17:0,54,805	1/1:3,27:22:63.17:1104,63,0	0/0:18,0:18:51.17:0,51,778	1/1:1,15:12:27.09:512,27,0	1/1:2,11:12:30.10:580,30,0	1/1:0,13:13:30.10:579,30,0	1/1:4,10:13:30.10:565,30,0	1/1:1,13:13:36.12:695,36,0	1/1:0,17:15:36.12:695,36,0	1/1:0,14:11:27.09:517,27,0	0/0:21,0:21:60.20:0,60,919	0/1:2,13:16:6.71:650,0,7	0/0:20,0:20:60.20:0,60,918	0/0:25,0:25:72.24:0,72,1099	0/0:29,0:29:84.29:0,84,1286	1/1:1,10:11:27.09:521,27,0	1/1:3,17:16:36.12:695,36,0	1/1:1,22:22:57.20:1101,57,0	1/1:2,14:13:33.11:630,33,0	0/0:20,2:20:60.20:0,60,918	0/0:16,1:16:48.15:0,48,705	0/0:4,0:4:12.04:0,12,184
chr10	44426093	.	AG	A	38.92	PASS	AB=0.774;AC=2;AF=0.036;AN=56;BaseQRankSum=1.677;DP=255;FS=4.730;HRun=3;HaplotypeScore=48.5527;InbreedingCoeff=-0.0511;MQ=85.32;MQ0=2;MQRankSum=-3.357;QD=2.59;ReadPosRankSum=-0.513;VQSLOD=-0.6512;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:16,1:17:48.15:0,48,672	0/0:5,0:5:15.05:0,15,216	0/0:8,0:8:18:0,18,222	0/0:16,0:12:21.27:0,21,303	0/0:14,0:14:42.14:0,42,602	0/0:11,0:11:30.10:0,30,431	0/0:6,0:6:18.06:0,18,258	0/0:22,0:20:60.20:0,60,859	0/0:5,0:5:15.05:0,15,216	0/0:7,0:7:18.06:0,18,259	0/0:8,0:8:24.07:0,24,327	0/0:10,0:9:18.05:0,18,241	0/0:8,0:8:21.07:0,21,302	0/0:2,0:2:6.02:0,6,86	0/1:6,4:9:99:106,0,148	0/0:13,0:12:30.10:0,30,432	0/0:8,0:8:21.07:0,21,302	0/0:11,0:11:27.09:0,27,388	0/0:12,0:12:36.11:0,36,501	0/0:10,0:10:30.09:0,30,414	0/0:7,0:7:18.05:0,18,241	0/1:4,1:5:20.42:20,0,118	0/0:4,0:4:5.95:0,6,83	0/0:4,0:4:9.03:0,9,129	0/0:9,1:10:21.06:0,21,283	0/0:7,0:7:21.07:0,21,302	0/0:7,0:7:18.06:0,18,259	0/0:6,0:6:18.06:0,18,259
chr10	44426121	.	A	AATATAT	1279.51	PASS	AB=1.000;AC=15;AF=0.341;AN=44;BaseQRankSum=1.269;DP=179;FS=32.723;HRun=0;HaplotypeScore=72.9052;InbreedingCoeff=0.6240;MQ=78.42;MQ0=6;MQRankSum=-5.689;QD=18.54;ReadPosRankSum=-2.450;VQSLOD=0.2708;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:8:18.03:0,18,352	0/0:5,0:5:5.72:0,6,73	0/0:13,0:4:2.88:0,3,16	0/1:22,0:12:10.48:10,0,43	0/0:13,0:13:27.01:0,27,500	0/0:10,0:10:30.03:0,30,555	0/0:2,0:2:6.02:0,6,132	1/1:20,0:19:28.71:223,29,0	0/0:5,0:5:6.02:0,6,132	1/1:3,0:3:6.02:136,6,0	1/1:3,0:3:3.01:38,3,0	./.	./.	./.	1/1:1,1:1:3.01:102,3,0	1/1:1,2:3:6.02:204,6,0	0/0:10,0:9:14.97:0,15,201	1/1:5,4:10:21.07:579,21,0	0/0:8,0:8:16.93:0,17,368	0/0:5,0:5:12.04:0,12,246	0/0:2,0:2:3.01:0,3,66	./.	./.	./.	1/1:2,1:3:6.02:140,6,0	0/0:9,0:9:27.09:0,27,579	0/0:6,0:6:9.03:0,9,198	0/0:8,0:8:14.97:0,15,199
chr10	44426161	.	TC	T	6377.16	PASS	AB=0.889;AC=51;AF=0.944;AN=54;BaseQRankSum=-2.185;DP=188;FS=0.000;HRun=1;HaplotypeScore=61.9347;InbreedingCoeff=0.2396;MQ=61.44;MQ0=0;MQRankSum=-2.418;QD=34.85;ReadPosRankSum=1.128;VQSLOD=4.6793;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,8:8:18.06:251,18,0	1/1:0,3:3:9.03:126,9,0	0/1:7,1:4:26.12:26,0,42	0/0:4,0:4:2.80:0,3,45	1/1:4,16:20:51.11:640,51,0	1/1:0,8:8:18.06:251,18,0	1/1:0,4:4:12.04:167,12,0	1/1:1,25:26:78.25:1075,78,0	1/1:0,7:7:18.06:250,18,0	1/1:0,7:7:21.07:293,21,0	1/1:2,7:9:24.06:303,24,0	1/1:0,3:3:9.03:126,9,0	1/1:1,6:7:21.05:275,21,0	1/1:0,4:3:9.03:126,9,0	1/1:0,2:2:6.02:84,6,0	1/1:0,5:5:12.04:167,12,0	1/1:0,8:7:12.04:167,12,0	1/1:0,7:7:15.05:209,15,0	1/1:0,10:10:30.10:419,30,0	1/1:1,4:5:9.03:125,9,0	1/1:0,1:1:3.01:42,3,0	1/1:0,3:3:9.03:125,9,0	1/1:0,4:4:9.03:125,9,0	./.	1/1:0,5:5:15.05:209,15,0	1/1:0,10:10:30.10:418,30,0	1/1:0,7:7:21.07:293,21,0	1/1:0,2:2:6.02:84,6,0
chr10	44426612	.	TCAC	T	12435.18	PASS	AB=0.977;AC=37;AF=0.661;AN=56;BaseQRankSum=-0.758;DP=857;FS=8.245;HRun=0;HaplotypeScore=176.4234;InbreedingCoeff=0.2815;MQ=59.75;MQ0=1;MQRankSum=-0.124;QD=17.47;ReadPosRankSum=2.514;VQSLOD=4.2213;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,46:47:54.18:857,54,0	0/1:12,0:12:41.84:42,0,239	0/0:25,0:20:50.06:0,50,604	0/0:28,0:25:53.19:0,53,694	1/1:4,22:26:27.09:434,27,0	0/0:23,0:23:63.12:0,63,1103	0/0:31,0:31:83.97:0,84,1464	0/1:31,0:31:99:468,0,115	0/0:38,0:38:99:0,111,2009	1/1:4,28:31:81.13:1046,81,0	1/1:10,6:15:36.03:421,36,0	0/1:39,1:40:94.80:95,0,753	0/1:45,0:45:99:144,0,736	0/1:38,1:39:99:200,0,678	1/1:2,40:42:78.05:1210,78,0	1/1:27,21:48:35.96:1249,36,0	0/1:13,1:14:72.53:73,0,309	1/1:3,22:25:21.03:307,21,0	1/1:0,21:21:62.90:737,63,0	1/1:2,21:22:36.12:578,36,0	1/1:1,52:53:71.80:1194,72,0	0/1:19,1:20:99:143,0,302	0/1:21,0:21:99:191,0,166	0/1:45,2:47:99:113,0,695	1/1:7,20:25:42.12:613,42,0	1/1:5,31:36:64.69:1216,65,0	1/1:3,33:36:51.17:818,51,0	1/1:0,11:11:18.06:289,18,0
chr10	44426675	.	TTGG	T	14595.12	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=15.096;DP=893;FS=18.805;HRun=0;HaplotypeScore=260.0290;InbreedingCoeff=0.9540;MQ=62.18;MQ0=3;MQRankSum=-13.150;QD=36.13;ReadPosRankSum=-2.514;VQSLOD=3.3809;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:58:99:0,129,2579	0/0:8,0:8:21.07:0,21,427	0/0:30,0:25:63.21:0,63,1303	0/0:47,0:44:99:0,111,2068	0/0:23,0:23:57.20:0,57,1219	0/0:25,0:25:66.23:0,66,1413	0/0:40,0:40:99:0,105,2216	1/1:6,36:39:99:1521,99,0	0/0:43,0:43:99:0,126,2709	1/1:5,23:27:2.37:960,2,0	1/1:11,13:20:42.10:634,42,0	1/1:6,35:41:99:1635,105,0	1/1:2,39:41:99:1638,105,0	1/1:6,28:34:99:1555,99,0	1/1:8,31:39:99:1518,99,0	1/1:3,39:42:99:1804,114,0	0/0:24,0:24:60.21:0,60,1302	1/1:5,12:17:39.12:590,39,0	0/0:22,0:22:57.15:0,57,1127	0/0:24,0:24:66.23:0,66,1422	0/0:68,0:68:99:0,159,3325	1/1:1,14:14:39.13:618,39,0	1/1:5,15:18:36.12:570,36,0	1/1:9,27:36:51.06:780,51,0	1/1:8,17:25:4.54:773,5,0	0/0:26,0:26:69.23:0,69,1446	0/0:38,0:38:93.31:0,93,1929	0/0:13,0:13:24.08:0,24,525
chr10	44426706	.	TGTC	T	10697.72	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=17.088;DP=861;FS=2.011;HRun=0;HaplotypeScore=283.9075;InbreedingCoeff=0.9962;MQ=53.54;MQ0=2;MQRankSum=-15.352;QD=27.36;ReadPosRankSum=-4.249;VQSLOD=3.7993;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:59,0:59:99:0,114,2272	0/0:7,0:7:15.05:0,15,308	0/0:37,1:34:18.76:0,19,1059	0/0:42,0:37:66.17:0,66,1239	0/0:19,0:19:42.14:0,42,840	0/0:22,0:22:66.21:0,66,1353	0/0:41,0:41:99:0,111,2264	1/1:12,28:38:75.25:1137,75,0	0/0:44,0:44:99:0,111,2246	1/1:11,21:31:63.16:899,63,0	1/1:9,9:18:38.86:400,39,0	1/1:8,34:42:99:1400,111,0	1/1:7,29:36:87.03:1133,87,0	1/1:7,30:37:92.84:1084,93,0	1/1:7,32:39:95.93:1168,96,0	1/1:5,36:41:99:1296,99,0	0/0:29,0:29:60.21:0,60,1190	1/1:5,10:14:30.02:409,30,0	0/0:24,0:24:51.16:0,51,993	0/0:25,0:23:51.13:0,51,980	0/0:55,0:55:99:0,126,2471	1/1:3,13:15:35.95:430,36,0	1/1:6,13:17:39:489,39,0	1/1:13,25:38:32.31:333,32,0	1/1:2,16:18:47.82:519,48,0	0/0:21,0:20:48.16:0,48,976	0/0:32,0:32:81.26:0,81,1576	0/0:11,0:11:21.07:0,21,434
chr10	44426725	.	GTCATCA	G	15273.83	PASS	AB=0.720;AC=42;AF=0.750;AN=56;BaseQRankSum=9.635;DP=845;FS=5.986;HRun=0;HaplotypeScore=286.4844;InbreedingCoeff=0.5398;MQ=44.46;MQ0=7;MQRankSum=-10.443;QD=22.66;ReadPosRankSum=0.856;VQSLOD=3.9106;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:19,36:55:57.19:1152,57,0	1/1:3,5:8:15.05:295,15,0	0/0:31,0:20:15.51:0,16,346	0/0:36,0:23:33.07:0,33,790	1/1:7,6:15:21.03:341,21,0	0/0:21,0:21:51.11:0,51,1493	0/0:41,0:41:90.29:0,90,2835	1/1:26,4:30:12.04:249,12,0	0/0:42,0:42:99:0,99,3013	0/1:23,14:32:99:983,0,208	1/1:7,8:15:0.37:267,0,0	1/1:15,31:46:75.26:1524,75,0	1/1:18,13:31:48.16:958,48,0	1/1:15,21:37:60.21:1156,60,0	1/1:17,20:37:47.34:1244,47,0	0/1:17,29:45:29.06:1260,0,29	1/1:10,24:34:36.12:700,36,0	0/1:12,2:14:99:164,0,102	1/1:14,6:20:21.04:374,21,0	1/1:8,21:27:27.09:517,27,0	1/1:40,10:50:20.99:340,21,0	1/1:8,11:18:24.08:483,24,0	1/1:8,10:17:30.10:586,30,0	1/1:23,21:44:1.33:316,1,0	1/1:8,9:17:24.08:474,24,0	1/1:7,20:25:45.05:809,45,0	1/1:10,21:32:45.15:905,45,0	0/1:6,6:12:60.89:175,0,61
chr10	44429797	.	CA	C	2295.98	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=10.541;DP=466;FS=5.934;HRun=6;HaplotypeScore=43.0338;InbreedingCoeff=0.9806;MQ=67.24;MQ0=0;MQRankSum=0.728;QD=28.00;ReadPosRankSum=1.266;VQSLOD=3.9168;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:45.15:0,45,592	0/0:10,0:10:27.09:0,27,355	0/0:5,0:5:15.05:0,15,191	0/0:6,0:6:9.03:0,9,110	0/0:37,0:37:99:0,99,1275	0/0:19,0:19:54.14:0,54,669	0/0:9,0:9:24.06:0,24,300	0/0:33,0:33:81.26:0,81,1054	0/0:17,0:17:51.15:0,51,651	0/0:19,0:19:57.15:0,57,731	0/0:24,0:24:72.22:0,72,933	1/1:0,13:13:39.10:419,39,0	1/1:0,19:19:54.14:580,54,0	1/1:0,6:6:15.04:161,15,0	0/0:15,0:15:45.15:0,45,592	0/0:16,0:16:45.15:0,45,592	0/0:24,0:24:69.22:0,69,906	0/0:13,0:13:33.11:0,33,433	0/0:23,0:23:60.18:0,60,774	0/0:20,0:20:57.19:0,57,750	0/0:8,0:8:24.06:0,24,299	1/1:0,11:11:33.08:355,33,0	1/1:1,20:21:60.15:645,60,0	1/1:1,11:12:30.08:322,30,0	0/0:20,0:20:60.19:0,60,777	0/0:13,0:13:39.13:0,39,513	0/0:25,0:25:69.21:0,69,893	0/0:12,0:12:33.11:0,33,434
chr10	44431375	.	C	CT	5555.45	PASS	AB=0.835;AC=33;AF=0.589;AN=56;BaseQRankSum=-6.722;DP=326;FS=4.431;HRun=8;HaplotypeScore=35.7412;InbreedingCoeff=0.6959;MQ=68.85;MQ0=4;MQRankSum=0.408;QD=20.96;ReadPosRankSum=3.824;VQSLOD=4.5656;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,12:14:8.64:353,9,0	1/1:1,8:9:18.05:208,18,0	0/1:24,1:11:17.82:18,0,85	0/1:24,1:11:21.54:22,0,67	1/1:6,17:23:45.13:517,45,0	0/0:3,0:3:6:0,6,55	0/0:2,0:2:6:0,6,55	0/0:15,0:15:30:0,30,274	0/0:3,0:3:9:0,9,82	1/1:0,10:12:35.94:393,36,0	1/1:1,10:11:30.09:346,30,0	0/0:5,0:5:5.94:0,6,55	0/0:6,0:6:18:0,18,159	0/0:12,0:12:33:0,33,297	1/1:1,8:9:24.07:275,24,0	0/1:3,5:8:12.41:123,0,12	1/1:2,18:21:44.97:499,45,0	1/1:3,18:21:48.14:554,48,0	1/1:4,10:15:32.90:348,33,0	1/1:2,5:7:15.04:171,15,0	1/1:3,4:7:12.04:138,12,0	0/0:6,0:5:12.01:0,12,110	0/0:4,0:4:12.01:0,12,110	0/0:5,0:5:11.99:0,12,105	1/1:3,18:21:54.16:623,54,0	1/1:1,6:7:18.05:208,18,0	1/1:1,16:17:33.10:381,33,0	1/1:0,12:12:33.10:379,33,0
chr10	44431390	.	C	CT	416.09	PASS	AB=0.972;AC=13;AF=0.232;AN=56;BaseQRankSum=-3.140;DP=279;FS=2.430;HRun=6;HaplotypeScore=48.7125;InbreedingCoeff=0.7042;MQ=69.76;MQ0=7;MQRankSum=1.163;QD=6.71;ReadPosRankSum=-1.171;VQSLOD=-0.6786;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:36.08:0,36,364	0/0:7,0:7:18.04:0,18,183	0/0:28,0:7:9.84:0,10,81	0/1:34,0:17:11.12:11,0,66	0/0:14,0:14:36.07:0,36,359	0/0:3,0:3:9.02:0,9,92	0/0:2,0:2:3:0,3,31	0/0:15,0:14:26.79:0,27,327	0/0:4,0:4:12.03:0,12,121	0/0:8,0:8:24.05:0,24,245	0/0:8,0:8:21.05:0,21,213	1/1:2,2:4:3.01:38,3,0	1/1:1,3:4:9.03:113,9,0	1/1:3,5:8:15.05:189,15,0	0/0:7,0:7:18.04:0,18,183	0/0:5,0:5:15.03:0,15,150	0/0:17,0:17:39.09:0,39,397	0/0:17,0:17:39.09:0,39,397	0/0:13,0:13:36.08:0,36,367	0/0:4,0:4:9.02:0,9,92	0/0:6,0:5:15.02:0,15,146	1/1:1,4:4:9.03:113,9,0	1/1:2,1:3:3.01:38,3,0	1/1:1,2:3:6.02:75,6,0	0/0:18,0:18:51.11:0,51,518	0/0:5,0:5:15.03:0,15,153	0/0:11,0:11:24.05:0,24,243	0/0:12,0:12:33.07:0,33,336
chr10	44432700	.	TA	T	7921.33	PASS	AB=0.966;AC=31;AF=0.554;AN=56;BaseQRankSum=9.308;DP=678;FS=7.593;HRun=10;HaplotypeScore=117.1808;InbreedingCoeff=0.9198;MQ=77.01;MQ0=0;MQRankSum=-1.335;QD=20.21;ReadPosRankSum=3.708;VQSLOD=4.3580;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:78.67:0,79,848	1/1:1,14:15:38.99:338,39,0	0/1:27,1:22:22.22:22,0,198	0/0:23,1:24:14.20:0,14,326	0/0:32,0:32:79.42:0,79,833	0/0:20,0:20:48.12:0,48,523	0/0:23,0:23:66.11:0,66,700	1/1:5,26:31:77.85:662,78,0	0/0:20,1:21:31.10:0,31,571	1/1:5,26:31:74.97:648,75,0	1/1:1,22:23:62.94:540,63,0	1/1:0,29:29:80.87:694,81,0	1/1:3,21:24:59.88:521,60,0	1/1:3,15:19:41:345,41,0	1/1:1,27:28:71.98:625,72,0	1/1:2,21:24:56.02:475,56,0	1/1:1,31:32:89.98:781,90,0	1/1:0,14:14:41.99:365,42,0	0/0:16,1:17:16.05:0,16,394	0/0:35,1:36:70.19:0,70,979	0/0:17,0:17:36.08:0,36,385	1/1:5,27:32:77.98:677,78,0	1/1:2,18:20:44.98:390,45,0	1/1:0,19:19:41.99:365,42,0	1/1:2,20:23:56.03:475,56,0	0/0:22,2:24:14.07:0,14,600	0/0:36,0:35:99:0,100,1055	0/0:6,0:6:18.05:0,18,197
chr10	44432987	.	TCATGTC	T	7356.58	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=12.226;DP=792;FS=2.234;HRun=0;HaplotypeScore=167.6987;InbreedingCoeff=0.9992;MQ=57.84;MQ0=31;MQRankSum=-16.013;QD=47.16;ReadPosRankSum=1.139;VQSLOD=5.0789;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:56:99:0,160,5455	0/0:13,0:13:39.13:0,39,1348	0/0:29,0:11:33.11:0,33,1062	0/0:28,0:12:29.38:0,29,1025	0/0:32,0:32:87.30:0,87,3026	0/0:19,0:19:57.20:0,57,1958	0/0:30,0:24:60.21:0,60,2052	0/0:39,0:37:96.33:0,96,3242	0/0:27,0:27:78.27:0,78,2603	0/0:37,0:34:96.33:0,96,3370	0/0:22,0:21:63.22:0,63,2218	1/1:3,24:27:57.20:1327,57,0	1/1:4,21:25:54.14:1208,54,0	1/1:3,23:24:63.22:1467,63,0	0/0:34,0:33:87.27:0,87,2831	0/0:20,0:19:57.20:0,57,1947	0/0:35,0:35:99:0,102,3431	0/0:20,0:20:60.21:0,60,1973	0/0:24,0:23:66.21:0,66,2082	0/0:23,0:23:63.22:0,63,2148	0/0:54,0:49:99:0,141,4765	1/1:7,24:30:63.22:1468,63,0	1/1:4,21:23:57.20:1328,57,0	1/1:7,15:21:23.67:558,24,0	0/0:19,0:19:51.17:0,51,1669	0/0:33,0:32:96.33:0,96,3361	0/0:32,0:30:93.32:0,93,3212	0/0:10,0:10:27.09:0,27,953
chr10	44434766	.	AT	A	3702.87	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=16.224;DP=666;FS=6.806;HRun=5;HaplotypeScore=87.8432;InbreedingCoeff=0.9749;MQ=61.20;MQ0=0;MQRankSum=0.462;QD=29.39;ReadPosRankSum=0.992;VQSLOD=3.9400;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:90.30:0,90,1230	0/0:13,0:13:39.13:0,39,534	0/0:8,0:5:15.05:0,15,192	0/0:4,0:2:6:0,6,58	0/0:55,0:55:99:0,160,2173	0/0:27,0:27:81.27:0,81,1097	0/0:17,0:17:48.16:0,48,657	0/0:39,0:39:99:0,108,1464	0/0:25,0:25:72.24:0,72,985	1/1:0,15:15:45.12:501,45,0	1/1:1,30:31:87.24:968,87,0	0/0:19,0:19:51.17:0,51,690	0/0:20,0:20:60.20:0,60,821	0/0:24,0:24:66.21:0,66,883	1/1:6,20:26:60.16:668,60,0	1/1:3,22:25:66.18:735,66,0	0/0:28,0:28:81.23:0,81,1072	1/1:0,7:7:21.05:231,21,0	0/0:24,0:24:69.23:0,69,944	0/0:39,0:39:99:0,114,1537	0/0:14,0:14:39.13:0,39,532	0/0:20,0:20:57.13:0,57,742	0/0:31,0:31:90.27:0,90,1189	0/0:19,0:19:57.19:0,57,780	1/1:3,19:21:54.15:601,54,0	0/0:30,0:30:90.30:0,90,1230	0/0:35,0:35:99:0,102,1394	0/0:17,0:16:38.88:0,39,529
chr10	44434998	.	AACACACAC	A	2138.57	PASS	AC=10;AF=0.185;AN=54;BaseQRankSum=1.522;DP=811;FS=27.494;HRun=0;HaplotypeScore=256.1362;InbreedingCoeff=0.9128;MQ=50.42;MQ0=41;MQRankSum=-6.596;QD=17.53;ReadPosRankSum=-1.222;VQSLOD=1.1791;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:42:48.16:0,48,1565	0/0:7,0:8:21.07:0,21,819	0/0:58,0:16:21.07:0,21,679	0/0:59,0:19:29.27:0,29,774	0/0:9,0:28:33.79:0,34,1211	0/0:22,0:24:51.18:0,51,1898	0/0:24,0:26:60.21:0,60,2157	0/0:35,0:32:42.57:0,43,1251	0/0:26,0:28:66.23:0,66,2733	0/0:35,0:33:66.11:0,66,1491	0/0:16,0:15:14.76:0,15,274	1/1:7,20:28:18.06:444,18,0	1/1:3,18:23:42.14:1022,42,0	1/1:5,20:25:21.07:504,21,0	0/0:41,0:40:21.66:0,22,441	0/0:32,0:31:26.34:0,26,480	0/0:29,0:32:69.15:0,69,2068	0/0:15,0:14:27.04:0,27,676	0/0:12,0:15:27.09:0,27,770	0/0:12,0:30:45.44:0,45,1605	0/0:14,0:39:63.22:0,63,2151	./.	1/1:6,17:21:12:253,12,0	1/1:6,15:21:3.01:78,3,0	0/0:28,0:28:17.01:0,17,250	0/0:10,0:31:73.40:0,73,2315	0/0:6,0:30:56.93:0,57,1861	0/0:5,0:7:5.87:0,6,147
chr10	44435146	.	TTG	T	5209.69	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=15.361;DP=719;FS=2.082;HRun=0;HaplotypeScore=95.4554;InbreedingCoeff=0.9990;MQ=64.30;MQ0=2;MQRankSum=-0.323;QD=36.69;ReadPosRankSum=-0.157;VQSLOD=6.8173;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:30:87.28:0,87,1482	0/0:12,0:12:36.11:0,36,609	0/0:25,0:18:50.32:0,50,720	0/0:17,0:15:36.06:0,36,509	0/0:35,0:35:99:0,102,1792	0/0:28,0:28:75.26:0,75,1315	0/0:25,0:25:63.20:0,63,1089	0/0:27,0:25:54.16:0,54,880	0/0:25,0:25:72.21:0,72,1217	1/1:0,26:26:78.22:1050,78,0	1/1:1,20:21:57.10:741,57,0	0/0:28,0:28:81.26:0,81,1350	0/0:20,0:20:57.20:0,57,1008	0/0:20,0:20:57.20:0,57,996	1/1:3,35:38:90.30:1235,90,0	1/1:1,19:19:54.18:741,54,0	0/0:33,0:33:93.32:0,93,1633	1/1:2,17:19:51.17:701,51,0	0/0:25,0:23:60.12:0,60,994	0/0:34,0:34:99:0,102,1800	0/0:32,0:32:93.28:0,93,1572	0/0:23,0:23:66.21:0,66,1127	0/0:31,0:31:87.26:0,87,1469	0/0:27,0:27:69.24:0,69,1217	1/1:0,18:18:54.18:742,54,0	0/0:33,2:35:20.70:0,21,1592	0/0:24,0:24:66.20:0,66,1131	0/0:20,0:20:51.14:0,51,839
chr10	44435589	.	C	CTT	3847.22	PASS	AB=0.693;AC=6;AF=0.107;AN=56;BaseQRankSum=8.889;DP=833;FS=4.191;HRun=8;HaplotypeScore=118.1131;InbreedingCoeff=-0.1208;MQ=67.77;MQ0=2;MQRankSum=1.218;QD=17.10;ReadPosRankSum=2.350;VQSLOD=1.6333;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:81.18:0,81,883	0/0:9,0:9:24.02:0,24,240	0/0:17,0:17:29.03:0,29,349	0/0:17,0:15:32.10:0,32,338	0/0:27,0:27:66.06:0,66,710	0/0:28,0:28:81.22:0,81,903	0/0:19,0:19:48.09:0,48,525	0/0:50,0:50:99:0,117,1243	0/0:28,0:28:78.14:0,78,831	0/1:27,34:56:99:1329,0,266	0/1:23,20:35:99:821,0,183	0/0:33,0:31:81.17:0,81,883	0/0:39,0:38:96.23:0,96,1070	0/0:47,0:43:99:0,102,1136	0/1:15,10:23:99:330,0,250	0/1:18,13:26:99:470,0,180	0/0:21,0:21:57.09:0,57,612	0/1:20,8:26:99:248,0,344	0/0:15,0:15:36.08:0,36,388	0/0:27,0:27:78.18:0,78,849	0/0:16,0:16:33.08:0,33,368	0/0:37,0:29:72.16:0,72,802	0/0:47,0:37:99:0,99,1103	0/0:37,0:36:99:0,105,1157	0/1:16,19:28:99:648,0,153	0/0:27,1:28:33.58:0,34,814	0/0:31,0:32:81.17:0,81,960	0/0:5,0:5:15.04:0,15,167
chr10	44436840	.	GA	G	2676.96	PASS	AB=0.531;AC=11;AF=0.196;AN=56;BaseQRankSum=12.944;DP=627;FS=3.552;HRun=1;HaplotypeScore=88.9710;InbreedingCoeff=0.8472;MQ=59.91;MQ0=5;MQRankSum=-2.564;QD=25.25;ReadPosRankSum=2.197;VQSLOD=3.7662;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,108,1696	0/0:1,0:1:3.01:0,3,48	0/0:27,0:11:33.10:0,33,500	0/0:26,0:14:39.13:0,39,614	0/0:22,0:22:60.20:0,60,945	0/0:22,0:22:63.21:0,63,1007	0/0:15,0:14:42.14:0,42,667	0/0:30,0:29:90.29:0,90,1387	0/0:25,0:25:75.24:0,75,1161	1/1:0,24:17:48.16:671,48,0	1/1:1,14:10:24.08:328,24,0	0/0:31,0:31:93.30:0,93,1455	0/0:21,0:21:63.20:0,63,983	0/0:25,0:25:75.25:0,75,1184	1/1:0,21:17:39.13:544,39,0	1/1:0,18:16:42.14:587,42,0	0/0:30,0:30:81.25:0,81,1265	1/1:0,11:10:27.09:378,27,0	0/0:23,0:22:66.23:0,66,1054	0/0:27,0:27:81.28:0,81,1294	0/0:45,0:45:99:0,135,2155	0/0:21,0:21:54.17:0,54,812	0/0:10,0:10:27.09:0,27,429	0/0:24,0:24:69.24:0,69,1101	0/1:2,15:14:17.71:347,0,18	0/0:21,1:22:24.26:0,24,959	0/0:26,0:26:78.25:0,78,1224	0/0:7,0:7:12.04:0,12,192
chr10	44436985	.	T	TTATC	7338.77	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-8.624;DP=744;FS=4.803;HRun=0;HaplotypeScore=119.0271;InbreedingCoeff=0.9991;MQ=72.79;MQ0=0;MQRankSum=-3.211;QD=46.16;ReadPosRankSum=0.572;VQSLOD=5.6001;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:35.99:0,36,509	0/0:13,0:13:33.02:0,33,501	0/0:39,0:35:46.06:0,46,1130	0/0:28,0:26:41.12:0,41,610	0/0:25,0:25:45.14:0,45,756	0/0:26,0:26:63.17:0,63,1020	0/0:17,0:17:42.13:0,42,692	0/0:55,0:55:99:0,138,2183	0/0:22,0:22:57.11:0,57,857	1/1:5,30:32:90.25:2013,90,0	1/1:3,23:26:48.16:1101,48,0	0/0:30,0:30:84.27:0,84,1456	0/0:36,0:36:96.30:0,96,1605	0/0:25,0:25:66.18:0,66,1073	1/1:3,28:31:66.23:1651,66,0	1/1:3,15:17:30.10:770,30,0	0/0:27,0:27:68.98:0,69,1088	1/1:3,16:18:33.11:844,33,0	0/0:24,0:24:57.15:0,57,875	0/0:33,0:33:93.15:0,93,1432	0/0:37,0:37:99:0,102,1537	0/0:28,0:28:72.16:0,72,1097	0/0:24,0:24:66.17:0,66,1069	0/0:16,0:16:27.09:0,27,471	1/1:5,21:26:39.13:959,39,0	0/0:24,0:24:66.18:0,66,1033	0/0:34,0:34:87.27:0,87,1496	0/0:8,0:8:23.93:0,24,311
chr10	44437383	.	TTTC	T	4520.25	PASS	AB=0.941;AC=13;AF=0.232;AN=56;BaseQRankSum=14.651;DP=640;FS=6.633;HRun=0;HaplotypeScore=114.6903;InbreedingCoeff=0.9021;MQ=67.97;MQ0=0;MQRankSum=-9.345;QD=38.31;ReadPosRankSum=-0.050;VQSLOD=5.8852;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:72.23:0,72,1574	0/0:15,0:15:42.14:0,42,969	0/1:15,1:16:4.26:4,0,655	0/0:19,0:19:20.72:0,21,872	0/0:32,0:32:93.29:0,93,1953	0/0:31,0:30:90.26:0,90,1942	0/0:18,0:18:54.19:0,54,1242	0/0:39,0:39:99:0,117,2483	0/0:27,0:27:81.28:0,81,1843	1/1:2,22:23:69.24:1149,69,0	1/1:9,15:23:57.19:946,57,0	0/0:24,0:24:69.24:0,69,1553	0/0:31,0:31:93.32:0,93,2107	0/0:27,0:27:81.28:0,81,1848	1/1:1,18:19:51.17:868,51,0	1/1:2,14:16:45.13:735,45,0	0/0:12,0:12:36.12:0,36,829	1/1:1,2:3:6.02:102,6,0	0/0:38,0:38:99:0,111,2399	0/0:34,0:34:99:0,102,2247	0/0:20,0:20:48.14:0,48,1059	0/0:29,0:29:87.28:0,87,1925	0/0:24,0:24:69.24:0,69,1578	0/0:14,0:14:37.33:0,37,766	1/1:1,15:15:42.14:715,42,0	0/0:25,1:26:27.21:0,27,1656	0/0:32,0:32:93.32:0,93,2056	0/0:6,0:6:18.06:0,18,414
chr10	44437410	.	GCAAAAT	G	6317.93	PASS	AB=0.583;AC=11;AF=0.196;AN=56;BaseQRankSum=13.975;DP=688;FS=0.000;HRun=0;HaplotypeScore=171.6542;InbreedingCoeff=0.8648;MQ=70.56;MQ0=0;MQRankSum=-14.014;QD=52.65;ReadPosRankSum=-0.312;VQSLOD=4.5293;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:87.30:0,87,2821	0/0:16,0:16:39.13:0,39,1348	0/0:19,0:19:48.16:0,48,1442	0/0:16,0:16:39.13:0,39,1177	0/0:25,0:25:66.23:0,66,2177	0/0:25,0:24:72.25:0,72,2344	0/0:18,0:18:42.14:0,42,1348	0/0:41,0:41:99:0,111,3712	0/0:34,0:34:93.32:0,93,3189	1/1:6,29:34:84.29:1900,84,0	1/1:3,14:15:36.12:814,36,0	0/0:27,0:27:75.26:0,75,2516	0/0:40,0:40:99:0,108,3614	0/0:29,0:29:87.30:0,87,2808	1/1:1,27:27:69.24:1561,69,0	1/1:2,16:17:45.15:1017,45,0	0/0:20,0:20:54.19:0,54,1816	0/1:2,5:6:88.68:256,0,89	0/0:33,0:33:72.25:0,72,2461	0/0:34,0:34:90.31:0,90,3066	0/0:23,0:23:66.23:0,66,2228	0/0:25,0:25:63.22:0,63,2128	0/0:22,0:22:63.22:0,63,2154	0/0:20,0:20:58.08:0,58,1842	1/1:4,11:14:36.10:769,36,0	0/0:31,1:32:19.42:0,19,2673	0/0:34,0:34:90.31:0,90,3019	0/0:2,0:2:6.02:0,6,208
chr10	44437465	.	C	CTCA	6954.77	PASS	AB=0.571;AC=33;AF=0.589;AN=56;BaseQRankSum=-3.096;DP=807;FS=2.191;HRun=0;HaplotypeScore=229.9077;InbreedingCoeff=0.7099;MQ=56.93;MQ0=4;MQRankSum=-3.537;QD=14.19;ReadPosRankSum=-0.435;VQSLOD=4.6256;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,1:33:5.36:130,5,0	0/1:4,12:16:24.88:217,0,25	0/0:26,0:21:3.01:0,3,35	0/0:36,0:26:0.49:0,0,35	1/1:9,0:21:3.01:39,3,0	0/0:35,0:34:72.24:0,72,958	0/0:28,0:28:48.12:0,48,607	1/1:34,0:31:11.62:129,12,0	0/0:42,0:43:84.23:0,84,1079	0/0:18,0:36:17.03:0,17,158	0/0:6,0:10:3.81:0,4,19	1/1:25,21:46:72.25:1316,72,0	1/1:31,17:47:69.19:1213,69,0	1/1:22,21:43:51.17:960,51,0	0/0:21,0:44:38.95:0,39,246	0/0:14,0:33:37.63:0,38,228	1/1:11,13:25:33.11:600,33,0	0/0:5,0:9:2.98:0,3,21	1/1:19,0:25:18:215,18,0	1/1:15,0:24:11.35:186,11,0	1/1:18,2:39:4.45:95,4,0	1/1:15,2:17:9.01:137,9,0	1/1:17,4:21:15.04:257,15,0	1/1:13,11:27:33.11:637,33,0	0/0:7,0:11:5.88:0,6,37	1/1:21,0:28:27.03:310,27,0	1/1:21,0:39:33.11:430,33,0	1/1:0,0:3:7.84:83,8,0
chr10	44437508	.	GTGTCATCAT	G	3961.77	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=8.453;DP=755;FS=1.598;HRun=0;HaplotypeScore=306.4963;InbreedingCoeff=0.9713;MQ=56.67;MQ0=16;MQRankSum=-8.824;QD=23.03;ReadPosRankSum=0.175;VQSLOD=2.6123;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:30:61.37:0,61,2421	0/0:14,0:14:21.07:0,21,988	0/0:48,0:27:64.74:0,65,2409	0/0:38,0:15:39.13:0,39,1366	0/0:19,0:19:30.10:0,30,1200	0/0:36,0:36:96.30:0,96,4081	0/0:28,0:28:69.24:0,69,2922	0/0:38,0:35:96.30:0,96,3800	0/0:37,0:37:99:0,99,4429	0/0:24,0:23:57.13:0,57,1774	0/0:12,0:10:17.97:0,18,354	1/1:15,24:39:50.52:1014,51,0	1/1:11,29:40:66.18:1676,66,0	1/1:11,29:40:41.88:791,42,0	0/0:32,0:32:66.23:0,66,1931	0/0:32,0:32:69.24:0,69,2149	0/0:29,0:29:66.21:0,66,2658	0/0:11,0:10:18.06:0,18,746	0/0:19,0:19:57.15:0,57,2187	0/0:23,0:23:52.35:0,52,2016	0/0:39,0:39:58.18:0,58,1892	1/1:3,11:13:9.01:141,9,0	1/1:5,11:16:11.61:123,12,0	1/1:13,10:23:13.43:217,13,0	0/0:8,0:8:21.07:0,21,709	0/0:22,0:21:57.20:0,57,2534	0/0:29,0:29:57.14:0,57,2470	0/0:14,0:14:39.09:0,39,1621
chr10	44437561	.	GTCATCATTGTCA	G	2716.56	PASS	AB=1.000;AC=16;AF=0.286;AN=56;BaseQRankSum=9.450;DP=699;FS=12.389;HRun=0;HaplotypeScore=320.0562;InbreedingCoeff=0.4477;MQ=65.35;MQ0=7;MQRankSum=-5.093;QD=8.82;ReadPosRankSum=-3.000;VQSLOD=0.7493;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:24:5.39:5,0,107	0/0:13,0:13:29.73:0,30,867	0/0:40,0:31:72.27:0,72,1324	0/0:52,0:39:89.66:0,90,1597	0/0:14,0:14:32.96:0,33,432	0/0:22,0:22:60.21:0,60,2270	0/0:27,0:27:72.25:0,72,1708	1/1:24,0:23:59.91:864,60,0	0/0:40,0:40:99:0,108,3678	0/1:12,0:12:14.64:15,0,414	0/0:11,0:11:8.77:0,9,110	1/1:26,5:31:22.20:526,22,0	1/1:33,2:35:17.55:552,18,0	1/1:40,6:45:20.99:687,21,0	0/0:30,0:30:36.28:0,36,554	0/1:23,0:23:28.54:29,0,567	0/0:27,0:27:78.27:0,78,2755	0/0:14,0:14:22.76:0,23,359	0/0:25,0:25:54.18:0,54,952	0/0:24,0:21:32.76:0,33,863	0/1:37,0:37:3.15:3,0,640	0/0:14,1:12:2.49:0,2,6	0/0:13,0:13:3.11:0,3,8	1/1:29,1:30:7.99:159,8,0	0/0:11,0:11:9.03:0,9,278	0/1:16,0:16:29.27:29,0,312	0/1:30,0:29:25.73:26,0,928	0/0:13,0:13:18.22:0,18,497
chr10	44437567	.	ATTG	A	952.22	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=6.484;DP=696;FS=9.093;HRun=0;HaplotypeScore=232.3357;InbreedingCoeff=0.1872;MQ=58.06;MQ0=9;MQRankSum=-2.467;QD=4.91;ReadPosRankSum=0.002;VQSLOD=1.5085;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:24.03:0,24,173	0/0:13,0:13:29.84:0,30,484	0/0:36,0:27:71.77:0,72,1312	0/0:46,0:33:89.03:0,89,1578	0/0:15,0:15:38.85:0,39,461	0/0:22,0:22:63:0,63,1256	0/0:28,0:28:80.37:0,80,1431	1/1:2,21:21:60.20:929,60,0	0/0:38,0:38:92.35:0,92,1929	0/0:10,0:10:14.50:0,15,429	0/0:10,0:10:8.98:0,9,117	0/1:32,0:32:61.85:62,0,102	0/1:38,0:38:22.75:23,0,176	0/1:44,0:43:54.73:55,0,80	0/0:26,0:26:39.41:0,39,821	0/1:22,0:22:9.44:9,0,547	0/0:29,0:29:86.80:0,87,1617	0/0:14,0:14:30.10:0,30,465	0/0:26,0:26:66.22:0,66,1025	0/0:27,0:23:58.91:0,59,776	0/0:39,0:39:67.24:0,67,856	0/0:15,0:12:2.49:0,2,6	0/0:14,0:14:9.02:0,9,73	0/1:35,0:35:5.60:6,0,46	0/0:11,0:11:9.51:0,10,376	0/0:14,0:14:37.23:0,37,496	0/0:28,0:27:77.52:0,78,963	0/0:13,0:13:38.94:0,39,551
chr10	44437570	.	GTCATCATCA	G	3643.13	PASS	AB=0.940;AC=25;AF=0.500;AN=50;BaseQRankSum=4.496;DP=691;FS=2.680;HRun=0;HaplotypeScore=280.4334;InbreedingCoeff=0.2942;MQ=54.19;MQ0=10;MQRankSum=-4.461;QD=8.97;ReadPosRankSum=-0.176;VQSLOD=2.3275;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:12,14:26:12.04:279,12,0	0/0:8,0:13:14.77:0,15,453	./.	./.	1/1:16,2:18:18.06:349,18,0	0/0:22,0:22:45.11:0,45,1601	0/0:28,0:29:45.07:0,45,1155	./.	0/0:36,0:38:69.24:0,69,2259	1/1:9,0:10:3.01:61,3,0	0/0:9,0:10:0.47:0,0,1	0/1:31,0:31:9.80:231,0,10	0/1:35,0:37:46.49:193,0,46	0/1:43,0:43:53.43:362,0,53	0/1:23,0:24:13.18:13,0,80	0/1:17,0:19:35.36:115,0,35	0/0:27,0:29:54.19:0,54,2006	0/0:14,0:14:3.06:0,3,8	1/1:25,4:28:8.97:96,9,0	1/1:14,14:24:15.05:308,15,0	1/1:38,2:40:30.10:621,30,0	0/0:17,0:14:5.34:0,5,24	0/0:13,0:13:2.50:0,2,9	0/1:34,0:34:26.59:63,0,27	0/1:8,0:11:10.51:36,0,11	1/1:12,2:13:15.05:351,15,0	1/1:21,5:26:18.02:406,18,0	1/1:11,3:14:6.02:162,6,0
chr10	44437579	.	A	ATTG	1284.09	PASS	AB=0.982;AC=8;AF=0.143;AN=56;BaseQRankSum=2.011;DP=676;FS=5.337;HRun=0;HaplotypeScore=223.5705;InbreedingCoeff=0.0026;MQ=49.37;MQ0=13;MQRankSum=1.015;QD=7.64;ReadPosRankSum=-5.955;VQSLOD=0.9196;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:28:2.37:151,2,0	0/0:14,0:14:18.32:0,18,421	0/0:28,0:20:44.26:0,44,765	0/0:33,0:20:54.14:0,54,826	0/1:20,1:21:99:366,0,263	0/0:25,0:25:69.18:0,69,1087	0/0:30,0:30:79.98:0,80,1318	0/0:22,0:18:51.17:0,51,801	0/0:41,0:41:99:0,117,1882	0/0:8,0:8:0.54:0,1,278	0/0:9,0:9:8.96:0,9,114	0/0:30,0:30:42.12:0,42,524	0/0:38,0:38:83.42:0,83,959	0/0:44,0:43:60.15:0,60,710	0/0:23,0:22:11.92:0,12,647	0/1:15,0:15:47.08:47,0,415	0/0:29,0:29:81.27:0,81,1317	0/0:12,0:12:30.08:0,30,431	0/1:23,0:22:21.75:22,0,613	0/1:25,0:21:99:180,0,504	0/1:42,3:45:99:639,0,460	0/0:16,0:12:15.05:0,15,194	0/0:15,0:15:5.50:0,6,110	0/0:34,0:34:26.84:0,27,354	0/1:11,0:11:6.70:7,0,304	0/0:15,0:14:38.70:0,39,528	0/0:27,0:26:37.37:0,37,929	0/0:14,0:14:39.11:0,39,552
chr10	44438218	.	CCTGAGAT	C	4955.49	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=12.786;DP=526;FS=18.127;HRun=0;HaplotypeScore=128.7408;InbreedingCoeff=0.9615;MQ=62.32;MQ0=0;MQRankSum=-10.775;QD=62.73;ReadPosRankSum=1.769;VQSLOD=3.9381;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:81.26:0,81,3104	0/0:17,0:17:51.18:0,51,2025	0/0:12,0:11:33.11:0,33,943	0/0:14,0:14:42.14:0,42,1529	0/0:27,0:27:81.28:0,81,3165	0/0:29,0:28:87.30:0,87,3408	0/0:25,0:25:72.25:0,72,2876	0/0:14,0:14:39.13:0,39,1498	0/0:18,0:18:54.19:0,54,2178	1/1:1,19:19:54.17:1320,54,0	1/1:0,3:1:3.01:79,3,0	0/0:17,0:17:51.18:0,51,1968	0/0:17,0:17:51.18:0,51,1921	0/0:23,0:23:69.24:0,69,2786	1/1:0,16:16:48.16:1263,48,0	1/1:1,14:15:42.14:1107,42,0	0/0:26,0:26:78.27:0,78,3127	1/1:2,8:10:18.06:475,18,0	0/0:17,0:17:48.16:0,48,1909	0/0:26,0:26:75.26:0,75,2972	0/0:21,0:21:63.22:0,63,2484	0/0:24,0:24:63.22:0,63,2512	0/0:19,0:19:54.19:0,54,2063	0/0:19,0:19:51.18:0,51,1985	1/1:1,14:14:27.09:712,27,0	0/0:21,0:21:57.19:0,57,2209	0/0:25,0:25:72.23:0,72,2677	0/0:9,0:9:24.08:0,24,883
chr10	44438797	.	G	GGATCCTTA	12048.55	PASS	AC=48;AF=0.923;AN=52;BaseQRankSum=-2.275;DP=525;FS=20.741;HRun=0;HaplotypeScore=62.8521;InbreedingCoeff=0.6366;MQ=42.06;MQ0=18;MQRankSum=-6.984;QD=27.08;ReadPosRankSum=0.905;VQSLOD=2.6172;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:8,23:29:26.58:1041,27,0	1/1:3,7:6:6.02:265,6,0	0/0:33,0:29:77.50:0,78,1990	0/0:28,0:24:72.24:0,72,1837	1/1:5,12:13:12.04:164,12,0	1/1:7,10:12:9.03:317,9,0	1/1:5,11:19:9.03:374,9,0	1/1:7,5:12:21.05:501,21,0	1/1:9,22:33:24.08:903,24,0	1/1:6,6:10:30.10:1106,30,0	1/1:5,4:4:9.03:397,9,0	1/1:8,23:26:27.06:1018,27,0	1/1:5,15:15:8.70:316,9,0	1/1:4,19:22:9.03:379,9,0	1/1:4,10:13:30.10:1230,30,0	1/1:7,8:13:12.04:379,12,0	1/1:5,10:14:9.03:246,9,0	1/1:1,6:5:6.02:265,6,0	1/1:3,5:7:15.04:409,15,0	1/1:4,11:16:15.05:383,15,0	1/1:2,7:7:9.03:304,9,0	1/1:7,12:13:12.04:407,12,0	./.	1/1:2,8:11:6.02:110,6,0	./.	1/1:2,15:12:27.05:740,27,0	1/1:4,15:18:12.04:530,12,0	1/1:1,5:9:6.02:265,6,0
chr10	44438862	.	ACTT	A	1754.90	PASS	AB=0.684;AC=6;AF=0.107;AN=56;BaseQRankSum=8.197;DP=1006;FS=9.419;HRun=0;HaplotypeScore=116.7350;InbreedingCoeff=-0.1261;MQ=41.58;MQ0=104;MQRankSum=-6.235;QD=11.32;ReadPosRankSum=1.625;VQSLOD=3.0154;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:77,0:72:99:0,111,2417	0/0:10,0:8:21.07:0,21,463	0/0:26,0:5:12.03:0,12,180	0/0:29,0:5:6.02:0,6,97	0/0:38,0:32:63.14:0,63,1266	0/0:32,0:26:45.15:0,45,964	0/0:28,0:28:42.14:0,42,926	0/0:46,0:36:72.25:0,72,1587	0/0:57,0:52:90.27:0,90,1940	0/1:17,20:23:99:597,0,400	0/1:9,14:14:99:265,0,108	0/0:46,0:38:51.17:0,51,1096	0/0:48,0:37:69.14:0,69,1477	0/0:45,0:39:66.13:0,66,1407	0/1:17,23:22:86.92:581,0,87	0/1:17,8:11:99:265,0,108	0/0:45,0:43:69.20:0,69,1477	0/1:7,8:8:54.17:133,0,54	0/0:22,0:12:33.11:0,33,728	0/0:52,0:45:99:0,105,2270	0/0:52,0:49:99:0,120,2600	0/0:37,0:27:57.15:0,57,1195	0/0:33,0:30:60.21:0,60,1325	0/0:41,0:40:66.23:0,66,1456	0/1:11,4:5:39.13:39,0,123	0/0:36,1:30:27.07:0,27,1525	0/0:30,0:25:48.16:0,48,1044	0/0:20,0:18:33.11:0,33,728
chr10	44439831	.	AT	A	4191.09	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=13.562;DP=733;FS=10.979;HRun=6;HaplotypeScore=69.9460;InbreedingCoeff=0.9985;MQ=76.39;MQ0=0;MQRankSum=-0.181;QD=27.57;ReadPosRankSum=0.594;VQSLOD=3.5599;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:45.13:0,45,577	0/0:12,0:12:36.12:0,36,474	0/0:22,1:23:22.97:0,23,625	0/0:18,0:18:32.39:0,32,429	0/0:40,0:40:99:0,114,1485	0/0:28,0:28:81.25:0,81,1052	0/0:14,0:14:42.14:0,42,553	0/0:27,0:27:69.18:0,69,877	0/0:24,0:24:66.21:0,66,868	0/0:40,0:40:99:0,120,1579	0/0:34,0:34:93.25:0,93,1178	1/1:2,24:26:66.17:709,66,0	1/1:4,26:30:75.19:806,75,0	1/1:1,21:22:63.16:677,63,0	0/0:40,0:40:99:0,114,1500	0/0:28,0:28:78.24:0,78,1011	0/0:20,0:20:60.18:0,60,774	0/0:24,0:24:66.21:0,66,868	0/0:21,0:21:60.20:0,60,789	0/0:37,0:37:99:0,99,1290	0/0:19,0:19:51.15:0,51,647	1/1:1,25:26:63.15:677,63,0	1/1:3,30:33:84.21:902,84,0	1/1:0,15:15:39.10:419,39,0	0/0:32,0:29:84.27:0,84,1094	0/0:34,0:34:99:0,99,1279	0/0:38,0:37:99:0,111,1445	0/0:7,0:7:21.07:0,21,276
chr10	44440172	.	A	ATGTGTGTG	13195.12	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-1.046;DP=1050;FS=1.632;HRun=0;HaplotypeScore=261.9104;InbreedingCoeff=0.9934;MQ=62.84;MQ0=1;MQRankSum=-14.891;QD=61.95;ReadPosRankSum=-1.046;VQSLOD=4.2180;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,114,2921	0/0:10,0:10:27.08:0,27,665	0/0:36,0:35:84.09:0,84,1660	0/0:41,0:36:42.87:0,43,1458	0/0:35,0:35:90.24:0,90,2125	0/0:39,0:39:99:0,99,2483	0/0:39,0:39:84.25:0,84,2043	0/0:54,0:54:99:0,132,3070	0/0:51,0:51:99:0,134,3443	1/1:11,35:47:99:3952,108,0	1/1:4,18:26:38.81:1492,39,0	0/0:45,0:45:99:0,102,2638	0/0:43,0:43:99:0,105,2492	0/0:38,0:37:94.16:0,94,2246	1/1:9,45:56:74.55:3013,75,0	1/1:8,34:43:66.23:2745,66,0	0/0:28,0:27:53.62:0,54,1894	1/1:4,9:15:12.04:505,12,0	0/0:20,0:20:42.12:0,42,981	0/0:38,0:38:93.29:0,93,2332	0/0:64,0:64:99:0,124,4056	0/0:41,0:41:99:0,111,2931	0/0:36,0:36:78.24:0,78,1858	0/0:46,0:46:99:0,105,2546	1/1:5,21:26:36.12:1488,36,0	0/0:39,0:39:99:0,102,2448	0/0:36,0:36:81.24:0,81,2043	0/0:11,0:11:30.06:0,30,687
chr10	44441450	.	A	AGGATAAAGCCATAAT	51884.79	PASS	AB=0.909;AC=29;AF=0.518;AN=56;BaseQRankSum=-2.254;DP=739;FS=1.253;HRun=0;HaplotypeScore=268.0213;InbreedingCoeff=0.9243;MQ=61.10;MQ0=0;MQRankSum=-20.046;QD=146.15;ReadPosRankSum=1.077;VQSLOD=4.4874;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:19,6:30:51.17:2669,51,0	0/1:9,1:10:99:193,0,1050	0/0:21,0:19:48.16:0,48,1717	0/0:46,0:37:16.06:0,16,2402	1/1:12,9:22:57.19:2951,57,0	0/0:23,0:23:63.22:0,63,2710	0/0:32,0:32:87.26:0,87,3410	0/0:40,0:40:99:0,111,4057	0/0:22,0:22:63.20:0,63,2500	1/1:17,11:28:78.27:5064,78,0	1/1:14,9:27:75.26:4126,75,0	0/0:19,0:19:57.20:0,57,2430	0/0:29,0:29:77.93:0,78,3119	0/0:24,0:24:66.23:0,66,2791	1/1:20,10:32:84.29:4873,84,0	1/1:11,16:33:81.28:5329,81,0	0/0:34,0:34:90.31:0,90,3614	1/1:8,6:15:28.89:2066,29,0	1/1:13,2:16:32.42:1621,32,0	1/1:13,11:27:72.25:4160,72,0	1/1:6,5:15:27.09:1269,27,0	0/0:39,0:39:99:0,114,4653	0/0:18,0:18:51.18:0,51,2162	0/0:36,0:36:96.24:0,96,3566	1/1:10,8:20:51.18:3389,51,0	1/1:19,12:33:90.29:5814,90,0	1/1:16,21:40:99:7345,108,0	1/1:3,3:6:15.05:1016,15,0
chr10	44442852	.	A	AG	18425.40	PASS	AB=0.917;AC=31;AF=0.554;AN=56;BaseQRankSum=-5.511;DP=800;FS=0.545;HRun=1;HaplotypeScore=97.8933;InbreedingCoeff=0.9280;MQ=76.62;MQ0=0;MQRankSum=-0.753;QD=38.63;ReadPosRankSum=-0.158;VQSLOD=4.8267;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,45:46:99:1887,126,0	0/0:20,0:20:57.18:0,57,739	0/0:15,0:15:12.19:0,12,367	0/1:20,2:22:10.82:11,0,409	1/1:0,20:20:54.18:801,54,0	0/0:16,0:16:45.15:0,45,584	0/0:31,0:31:90.28:0,90,1154	1/1:2,37:39:99:1610,114,0	0/0:25,0:25:75.23:0,75,960	0/0:28,0:28:84.26:0,84,1069	0/0:24,0:23:69.22:0,69,894	1/1:1,43:44:99:1797,120,0	1/1:0,23:23:60.20:897,60,0	1/1:2,41:43:99:1706,114,0	0/0:40,0:40:99:0,120,1543	0/0:33,0:33:93.28:0,93,1182	0/0:38,0:38:96.29:0,96,1230	0/0:34,0:34:99:0,99,1267	1/1:0,21:21:63.20:925,63,0	1/1:2,29:31:84.28:1249,84,0	1/1:2,46:48:99:1909,129,0	1/1:0,21:21:54.11:780,54,0	1/1:0,26:26:75.25:1121,75,0	1/1:0,34:34:90.30:1348,90,0	0/0:19,0:19:57.19:0,57,739	1/1:1,24:25:69.21:993,69,0	1/1:1,27:28:75.25:1121,75,0	1/1:0,6:6:18.06:270,18,0
chr10	44443763	.	T	TA	5488.13	PASS	AB=1.000;AC=17;AF=0.567;AN=30;BaseQRankSum=2.347;DP=360;FS=8.895;HRun=8;HaplotypeScore=95.7189;InbreedingCoeff=0.8900;MQ=98.04;MQ0=0;MQRankSum=-3.279;QD=24.95;ReadPosRankSum=3.395;VQSLOD=5.0047;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,33:38:87.26:1004,87,0	0/0:9,0:9:24.01:0,24,219	0/0:22,0:21:41.06:0,41,383	0/1:21,0:21:3.69:4,0,228	1/1:0,27:26:72.21:831,72,0	0/0:27,0:27:72.02:0,72,653	0/0:30,0:30:81.01:0,81,733	./.	0/0:25,0:25:66.03:0,66,604	./.	./.	./.	./.	./.	./.	./.	0/0:27,0:27:81.04:0,81,741	./.	1/1:4,16:20:45.12:508,45,0	1/1:5,24:29:69.14:779,69,0	1/1:1,25:26:63.19:727,63,0	./.	./.	./.	./.	1/1:4,25:29:72.15:804,72,0	1/1:1,24:25:63.19:727,63,0	1/1:2,3:5:9.03:104,9,0
chr10	44445060	.	GA	G	5050.30	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=-5.881;DP=494;FS=1.193;HRun=1;HaplotypeScore=99.9449;InbreedingCoeff=0.6228;MQ=79.24;MQ0=0;MQRankSum=-1.805;QD=22.45;ReadPosRankSum=-2.617;VQSLOD=4.1892;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,30:30:72.24:1006,72,0	0/0:10,0:10:30.09:0,30,448	0/0:13,0:13:36.12:0,36,550	0/0:16,0:16:42.12:0,42,620	1/1:0,14:14:42.14:587,42,0	0/0:25,0:25:75.24:0,75,1142	0/0:23,0:23:69.15:0,69,1006	0/1:18,0:18:10.85:11,0,125	0/0:19,0:19:57.17:0,57,866	0/1:12,0:12:0.15:0,0,82	0/1:19,0:19:25.85:26,0,178	0/0:16,0:16:44.60:0,45,217	0/0:17,0:17:21.97:0,22,194	0/0:14,0:14:12.05:0,12,138	0/1:20,0:20:21.78:22,0,157	0/0:20,0:20:47.34:0,47,250	0/0:18,0:18:54.15:0,54,816	0/0:20,0:20:11.83:0,12,187	1/1:0,9:9:27.02:335,27,0	1/1:0,17:17:42.10:564,42,0	1/1:0,20:20:36.12:503,36,0	0/0:12,0:12:8.56:0,9,116	0/0:21,0:21:12.69:0,13,243	0/0:25,0:25:69.62:0,70,335	0/1:14,0:14:15.65:16,0,127	1/1:1,19:20:48.38:782,48,0	1/1:0,30:30:81.14:1131,81,0	1/1:1,1:2:6.01:68,6,0
chr10	44445186	.	G	GC	16711.37	PASS	AB=0.909;AC=43;AF=0.768;AN=56;BaseQRankSum=4.381;DP=488;FS=12.415;HRun=0;HaplotypeScore=72.7542;InbreedingCoeff=0.8687;MQ=72.25;MQ0=0;MQRankSum=-4.751;QD=42.74;ReadPosRankSum=3.404;VQSLOD=4.5431;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,34:34:93.32:1486,93,0	0/0:4,0:4:9.03:0,9,125	0/1:9,1:9:16.73:17,0,262	0/0:8,0:8:21.07:0,21,291	1/1:1,12:13:32.91:556,33,0	0/0:22,0:22:66.19:0,66,885	0/0:15,0:15:45.15:0,45,628	1/1:0,29:28:87.25:1318,87,0	0/0:17,0:17:51.15:0,51,695	1/1:0,19:20:60.20:945,60,0	1/1:1,7:8:21.06:313,21,0	1/1:0,25:25:72.25:1147,72,0	1/1:0,15:15:45.15:718,45,0	1/1:0,13:13:36.12:576,36,0	1/1:0,22:22:51.17:814,51,0	1/1:1,19:20:6.20:678,6,0	0/0:31,0:31:90.28:0,90,1238	1/1:0,17:17:42.14:662,42,0	1/1:3,19:22:60.19:921,60,0	1/1:1,22:23:66.23:1053,66,0	1/1:0,15:15:36.12:576,36,0	1/1:0,9:9:24.08:384,24,0	1/1:0,14:14:42.14:671,42,0	1/1:0,15:15:45.15:719,45,0	1/1:0,21:21:63.21:1007,63,0	1/1:0,19:19:57.19:906,57,0	1/1:0,21:21:60.20:959,60,0	1/1:0,6:6:18.06:288,18,0
chr10	44445453	.	C	CATATAT	2862.58	PASS	AB=0.818;AC=13;AF=0.241;AN=54;BaseQRankSum=1.683;DP=393;FS=15.117;HRun=0;HaplotypeScore=94.9899;InbreedingCoeff=0.8192;MQ=95.73;MQ0=0;MQRankSum=-7.952;QD=34.91;ReadPosRankSum=-1.440;VQSLOD=2.1535;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,13:23:30.10:959,30,0	0/0:7,0:7:15.05:0,15,330	0/0:19,0:19:36.11:0,36,718	0/0:24,0:24:56.95:0,57,1088	1/1:5,3:8:6.02:204,6,0	0/0:14,0:14:23.77:0,24,486	0/0:27,0:27:69.22:0,69,1489	0/0:17,0:17:39.13:0,39,833	0/0:16,0:16:45.12:0,45,944	0/0:19,0:19:51.12:0,51,1082	0/0:8,0:8:21.07:0,21,466	0/0:17,0:17:36.11:0,36,740	0/0:13,0:13:33.11:0,33,732	0/0:16,0:16:45.15:0,45,998	0/0:9,0:9:24.08:0,24,516	0/0:12,0:12:33.11:0,33,732	0/0:24,0:24:51.15:0,51,1086	0/0:13,0:13:30.07:0,30,593	1/1:9,3:13:18.06:461,18,0	1/1:2,10:13:21.07:619,21,0	1/1:5,0:10:3.01:39,3,0	0/0:11,0:11:21.07:0,21,465	0/0:12,0:12:33.11:0,33,703	0/0:16,0:16:42.14:0,42,932	0/0:12,0:13:30.57:0,31,651	0/1:7,2:9:48.52:448,0,49	1/1:3,3:6:9.03:306,9,0	./.
chr10	44445618	.	T	TAG	83.20	PASS	AB=0.500;AC=16;AF=0.727;AN=22;BaseQRankSum=-0.336;DP=76;FS=0.000;HRun=0;HaplotypeScore=27.4185;InbreedingCoeff=0.4429;MQ=67.46;MQ0=42;MQRankSum=-2.450;QD=2.87;ReadPosRankSum=1.453;VQSLOD=0.4682;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:3,1:1:0.47:1,0,0	./.	0/0:15,0:2:6:0,6,56	0/0:18,0:3:9.03:0,9,117	0/1:0,7:7:0:0,0,0	1/1:0,3:3:0.47:1,0,0	./.	./.	1/1:0,1:1:0.47:1,0,0	1/1:0,2:2:6.02:96,6,0	./.	./.	1/1:0,1:1:3.01:56,3,0	./.	./.	./.	./.	./.	./.	1/1:1,7:8:4.23:10,4,0	./.	1/1:0,2:2:0.47:1,0,0	./.	./.	0/1:0,1:1:0:0,0,0	./.	./.	./.
chr10	44445630	.	AGCT	A	682.25	PASS	AC=16;AF=0.800;AN=20;BaseQRankSum=-2.444;DP=78;FS=0.000;HRun=0;HaplotypeScore=22.3140;InbreedingCoeff=0.4564;MQ=60.49;MQ0=48;MQRankSum=-3.317;QD=29.66;ReadPosRankSum=2.269;VQSLOD=3.4100;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	1/1:0,1:1:3.01:56,3,0	0/0:17,0:2:5.81:0,6,77	0/0:19,0:3:9.03:0,9,196	1/1:0,6:6:9.50:168,10,0	1/1:0,3:3:3.01:56,3,0	./.	./.	./.	1/1:0,2:2:6.02:104,6,0	./.	./.	1/1:0,1:1:0.89:2,1,0	./.	./.	1/1:0,1:1:3.01:56,3,0	./.	./.	./.	1/1:0,7:7:15.02:279,15,0	./.	1/1:0,2:2:3.01:56,3,0	./.	./.	./.	./.	./.	./.
chr10	44445791	.	ACAC	A	388.85	PASS	AB=0.831;AC=6;AF=0.125;AN=48;BaseQRankSum=-6.274;DP=182;FS=1.599;HRun=0;HaplotypeScore=165.0168;InbreedingCoeff=-0.1552;MQ=46.57;MQ0=0;MQRankSum=0.676;QD=7.20;ReadPosRankSum=-2.806;VQSLOD=2.5505;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:3,0:3:5.94:0,6,44	0/1:5,8:13:82.96:311,0,83	0/0:4,0:1:3.01:0,3,74	0/0:2,0:3:9.02:0,9,121	./.	0/1:7,2:9:62.77:63,0,182	0/0:10,1:10:19.94:0,20,165	0/0:10,0:10:26.98:0,27,228	0/0:13,0:13:38.76:0,39,366	0/1:11,1:12:41.88:42,0,169	0/1:7,3:9:29.57:30,0,34	0/0:7,0:7:20.70:0,21,155	0/0:5,0:5:14.81:0,15,109	0/0:6,0:6:17.72:0,18,126	0/0:7,0:7:17.74:0,18,136	0/0:15,1:15:44.11:0,44,328	0/0:5,1:6:11.77:0,12,89	./.	0/0:2,0:2:2.80:0,3,13	0/0:9,0:9:8.93:0,9,43	./.	0/0:5,0:5:3.06:0,3,43	0/0:6,1:6:2.32:0,2,8	0/0:1,0:1:2.74:0,3,12	0/1:5,1:6:35.35:53,0,35	0/0:6,0:6:9.18:0,9,73	0/1:4,0:4:0.70:1,0,16	./.
chr10	44446060	.	A	AAC	19702.75	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=-3.007;DP=931;FS=31.236;HRun=0;HaplotypeScore=207.1692;InbreedingCoeff=0.9709;MQ=56.24;MQ0=4;MQRankSum=-2.115;QD=30.03;ReadPosRankSum=2.752;VQSLOD=3.4930;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,23:27:27:352,27,0	0/0:22,0:22:63.07:0,63,740	0/0:34,0:32:35.97:0,36,781	0/0:55,1:52:19.05:0,19,1131	1/1:2,15:17:14.83:138,15,0	0/0:48,0:48:99:0,103,1231	0/0:40,0:40:99:0,102,1292	1/1:14,32:47:99:1537,99,0	0/0:46,0:46:85.94:0,86,1158	1/1:4,41:46:99:1981,123,0	1/1:3,12:16:33.11:553,33,0	1/1:10,42:52:99:1666,99,0	1/1:5,52:57:99:2122,126,0	1/1:6,40:47:84.29:1416,84,0	1/1:9,39:46:90.31:1499,90,0	1/1:7,43:50:90.31:1507,90,0	0/0:28,0:28:70.57:0,71,940	1/1:5,23:28:69.19:1133,69,0	1/1:3,7:12:24.05:352,24,0	1/1:4,15:22:21.07:275,21,0	1/1:19,12:31:16.97:227,17,0	1/1:3,21:23:54.18:909,54,0	1/1:1,15:17:39.13:631,39,0	1/1:7,49:58:99:1787,108,0	1/1:3,17:20:45.15:759,45,0	1/1:4,16:20:36.07:559,36,0	1/1:4,7:11:14.93:224,15,0	1/1:0,5:5:6.02:76,6,0
chr10	44446485	.	TC	T	16681.10	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=16.257;DP=720;FS=10.552;HRun=5;HaplotypeScore=148.4392;InbreedingCoeff=0.9999;MQ=79.32;MQ0=0;MQRankSum=-5.199;QD=29.32;ReadPosRankSum=4.002;VQSLOD=2.9605;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,30:33:81.19:903,81,0	0/0:12,0:12:36.12:0,36,490	0/0:18,0:18:54.17:0,54,702	0/0:19,0:19:45.15:0,45,615	1/1:1,31:32:72.21:816,72,0	0/0:32,0:32:96.21:0,96,1242	0/0:27,0:27:78.24:0,78,1035	1/1:7,20:27:60.12:650,60,0	0/0:27,0:27:78.26:0,78,1066	1/1:2,34:36:99:1157,102,0	1/1:1,22:23:63.18:715,63,0	1/1:0,25:25:69.20:783,69,0	1/1:0,27:27:69.20:783,69,0	1/1:0,21:21:60.17:681,60,0	1/1:1,42:43:99:1225,108,0	1/1:4,26:30:72.20:817,72,0	0/0:16,0:16:48.16:0,48,654	1/1:1,15:16:42.12:474,42,0	1/1:3,20:23:60.15:670,60,0	1/1:3,25:28:72.20:813,72,0	1/1:4,21:25:63.18:714,63,0	1/1:0,36:36:99:1143,105,0	1/1:1,19:20:48.14:544,48,0	1/1:1,21:22:57.16:646,57,0	1/1:0,30:30:81.23:919,81,0	1/1:1,23:24:69.20:783,69,0	1/1:2,35:37:99:1106,99,0	1/1:1,10:11:30.08:340,30,0
chr10	44446877	.	C	CAA	6483.07	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=14.643;DP=685;FS=6.690;HRun=1;HaplotypeScore=172.2622;InbreedingCoeff=0.9964;MQ=83.09;MQ0=1;MQRankSum=-13.856;QD=38.14;ReadPosRankSum=-7.082;VQSLOD=2.0639;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:4,22:26:63.51:1054,64,0	0/0:13,0:13:33:0,33,434	0/0:26,0:26:33.31:0,33,774	0/0:30,0:30:55.01:0,55,879	1/1:2,20:22:43.03:508,43,0	0/0:19,0:18:57.19:0,57,869	0/0:24,0:24:66.21:0,66,987	0/0:33,0:33:90.29:0,90,1337	0/0:23,0:23:66.22:0,66,1009	0/0:22,0:22:66.22:0,66,1007	0/0:18,0:18:54.14:0,54,761	0/0:27,0:27:78.26:0,78,1194	0/0:28,0:28:84.22:0,84,1191	0/0:34,0:34:99:0,102,1555	0/0:41,0:41:99:0,120,1792	0/0:31,0:31:87.26:0,87,1289	0/0:31,0:31:90.28:0,90,1351	0/0:17,0:17:48.12:0,48,709	1/1:7,14:19:48.16:874,48,0	1/1:3,22:26:66.03:1080,66,0	1/1:4,20:24:54.83:851,55,0	0/0:24,0:24:63.20:0,63,937	0/0:27,0:27:81.23:0,81,1202	0/0:25,0:25:75.24:0,75,1116	0/0:22,0:22:63.21:0,63,963	1/1:6,18:24:20.23:1110,20,0	1/1:3,17:22:48.07:792,48,0	1/1:2,3:5:14.97:214,15,0
chr10	44447235	.	T	TA	10334.12	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=10.151;DP=589;FS=7.586;HRun=6;HaplotypeScore=104.3612;InbreedingCoeff=0.9903;MQ=65.07;MQ0=1;MQRankSum=-3.904;QD=21.57;ReadPosRankSum=2.211;VQSLOD=3.5538;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,1:56:99:526,102,0	0/0:8,0:8:24.05:0,24,245	0/0:10,0:8:18.02:0,18,176	0/0:13,0:12:27.01:0,27,263	1/1:1,0:24:49.80:249,50,0	0/0:22,0:22:60.13:0,60,612	0/0:19,0:19:57.11:0,57,574	1/1:4,23:27:69.22:866,69,0	0/0:21,0:21:63.13:0,63,634	1/1:3,25:28:75.24:943,75,0	1/1:2,21:23:60.19:754,60,0	1/1:2,18:20:51.16:642,51,0	1/1:1,19:20:51.16:642,51,0	1/1:5,17:22:48.15:604,48,0	1/1:2,17:19:48.15:604,48,0	1/1:0,24:24:60.19:755,60,0	0/0:17,0:17:48.11:0,48,489	1/1:3,12:15:36.12:453,36,0	1/1:3,0:22:59.87:301,60,0	1/1:3,0:30:68.46:354,68,0	1/1:4,0:20:10.85:124,11,0	1/1:2,11:13:30.10:377,30,0	1/1:4,15:19:45.14:558,45,0	1/1:0,10:10:27.09:340,27,0	1/1:0,13:13:36.12:453,36,0	1/1:2,1:24:56.76:286,57,0	1/1:4,0:34:68.02:344,68,0	1/1:0,2:14:31.25:159,31,0
chr10	44447431	.	A	AT	13389.82	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=13.283;DP=534;FS=0.403;HRun=4;HaplotypeScore=129.0137;InbreedingCoeff=0.9800;MQ=84.12;MQ0=0;MQRankSum=-6.375;QD=31.96;ReadPosRankSum=0.256;VQSLOD=3.4005;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,4:11:11.99:129,12,0	0/0:7,0:7:21.06:0,21,238	0/0:21,0:21:51.12:0,51,563	0/0:18,0:18:33.14:0,33,458	1/1:8,16:24:36.06:422,36,0	0/0:20,0:20:54.14:0,54,601	0/0:18,0:18:54.15:0,54,613	1/1:4,35:39:99:1400,105,0	0/0:21,0:21:63.18:0,63,714	1/1:1,28:29:81.24:1087,81,0	1/1:1,23:25:63.19:843,63,0	1/1:2,15:17:45.15:608,45,0	1/1:0,15:15:42.10:553,42,0	1/1:0,18:18:48.12:629,48,0	1/1:1,18:19:51.17:690,51,0	1/1:1,18:19:54.17:723,54,0	0/0:10,0:10:30.06:0,30,328	1/1:0,11:11:33.11:451,33,0	1/1:6,11:17:42.13:544,42,0	1/1:10,18:28:75.02:829,75,0	1/1:4,3:7:9.01:106,9,0	1/1:4,23:27:75.20:989,75,0	1/1:4,21:25:54.18:736,54,0	1/1:0,14:14:33.06:422,33,0	1/1:1,20:21:54.18:737,54,0	1/1:7,6:13:39.08:485,39,0	1/1:17,18:35:75.08:817,75,0	1/1:2,3:5:15.05:189,15,0
chr10	44447438	.	AC	A	3760.08	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=6.248;DP=532;FS=19.360;HRun=2;HaplotypeScore=167.6029;InbreedingCoeff=0.9805;MQ=83.54;MQ0=0;MQRankSum=-10.299;QD=27.05;ReadPosRankSum=0.886;VQSLOD=1.5937;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,7:11:15.05:188,15,0	0/0:7,0:7:18.06:0,18,270	0/0:21,0:21:63.21:0,63,929	0/0:17,0:17:48.16:0,48,713	1/1:5,22:27:57.16:690,57,0	0/0:19,0:19:57.18:0,57,836	0/0:19,0:19:57.18:0,57,832	0/0:35,0:35:99:0,102,1503	0/0:23,0:23:69.23:0,69,1023	0/0:31,0:31:93.30:0,93,1363	0/0:25,0:25:69.23:0,69,1032	0/0:19,0:19:57.11:0,57,798	0/0:15,0:15:39.09:0,39,557	0/0:19,0:19:54.18:0,54,807	0/0:19,0:19:57.15:0,57,826	0/0:20,0:20:57.15:0,57,829	0/0:9,0:9:24.07:0,24,340	0/0:11,0:11:33.11:0,33,491	1/1:4,12:16:39.12:481,39,0	1/1:9,18:27:75.20:869,75,0	1/1:4,3:7:12.04:156,12,0	0/0:26,0:26:78.26:0,78,1167	0/0:22,0:22:63.21:0,63,943	0/0:14,0:14:30.10:0,30,449	0/0:22,0:22:60.20:0,60,897	1/1:5,7:12:36.11:448,36,0	1/1:15,21:36:75.16:828,75,0	1/1:0,3:3:9.03:101,9,0
chr10	44447586	.	GCCA	G	416.83	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=0.883;DP=515;FS=6.445;HRun=0;HaplotypeScore=205.4046;InbreedingCoeff=0.8650;MQ=78.87;MQ0=0;MQRankSum=-3.359;QD=32.06;ReadPosRankSum=-1.725;VQSLOD=3.0852;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:30.10:0,30,692	0/0:11,0:11:33.11:0,33,781	0/0:25,0:26:64.25:0,64,1494	0/0:27,0:28:77.92:0,78,1679	0/0:31,0:31:69:0,69,1596	0/0:27,0:27:78.27:0,78,1844	0/0:18,0:18:54.19:0,54,1274	1/1:0,13:13:30.10:511,30,0	0/0:22,0:22:66.21:0,66,1513	0/0:18,0:18:51.13:0,51,1153	0/0:20,0:20:51.18:0,51,1201	0/0:17,0:17:48.16:0,48,1128	0/0:21,0:21:60.21:0,60,1412	0/0:18,0:18:54.14:0,54,1223	0/0:18,0:18:48.12:0,48,1081	0/0:18,0:18:54.14:0,54,1219	0/0:19,0:19:54.19:0,54,1268	0/0:4,0:4:12.04:0,12,283	0/0:17,0:17:39.13:0,39,877	0/0:29,0:29:84.29:0,84,1980	0/0:12,0:12:12.03:0,12,278	0/0:15,0:15:30.10:0,30,707	0/0:11,0:11:24.08:0,24,564	0/0:12,0:12:12.04:0,12,283	0/0:15,0:15:27.09:0,27,637	0/0:17,0:17:51.16:0,51,1159	0/0:31,0:31:63.20:0,63,1410	0/0:4,0:4:9.03:0,9,202
chr10	44447892	.	AAAGGG	A	9640.60	PASS	AB=0.933;AC=27;AF=0.482;AN=56;BaseQRankSum=8.178;DP=499;FS=0.000;HRun=0;HaplotypeScore=111.5390;InbreedingCoeff=0.9044;MQ=76.16;MQ0=0;MQRankSum=-12.434;QD=42.47;ReadPosRankSum=1.630;VQSLOD=4.6109;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:57.20:0,57,1793	0/0:14,0:14:42.13:0,42,1263	0/0:17,0:17:44.95:0,45,1121	0/0:15,0:15:26.94:0,27,573	0/0:30,0:30:75.02:0,75,2377	0/0:32,0:32:93.32:0,93,2924	0/0:9,0:9:27.09:0,27,838	1/1:1,29:30:87.27:1791,87,0	0/0:22,0:22:63.20:0,63,1876	1/1:2,18:20:51.18:1098,51,0	1/1:1,8:9:15.05:324,15,0	1/1:0,6:6:15.05:325,15,0	1/1:1,21:22:54.18:1146,54,0	1/1:2,20:22:57.20:1223,57,0	1/1:1,20:21:54.19:1171,54,0	1/1:2,10:12:30.10:651,30,0	0/0:8,0:8:24.06:0,24,653	1/1:1,7:8:12.04:260,12,0	0/0:25,0:25:75.26:0,75,2204	0/0:28,0:28:78.27:0,78,2413	0/0:23,0:23:66.23:0,66,2061	1/1:0,14:14:24.08:496,24,0	1/1:2,10:12:15.05:324,15,0	1/1:0,5:5:12.04:260,12,0	1/1:0,18:18:24.08:520,24,0	0/1:26,2:28:49.04:49,0,2241	0/0:26,0:26:78.24:0,78,2295	0/0:4,0:3:9.03:0,9,285
chr10	44448938	.	TAA	T	9090.57	PASS	AB=0.781;AC=42;AF=0.750;AN=56;BaseQRankSum=12.014;DP=370;FS=7.702;HRun=5;HaplotypeScore=100.4038;InbreedingCoeff=0.7634;MQ=59.60;MQ0=1;MQRankSum=-8.134;QD=31.56;ReadPosRankSum=0.081;VQSLOD=3.9565;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,24:27:66.22:903,66,0	0/0:6,0:6:18.06:0,18,324	0/0:11,0:8:9.50:0,10,145	0/1:10,0:7:5.78:6,0,21	1/1:4,17:21:42.12:550,42,0	0/0:19,0:19:54.19:0,54,963	0/0:19,0:19:48.16:0,48,851	1/1:4,18:22:42.11:543,42,0	0/0:10,0:10:27.09:0,27,482	1/1:1,19:20:54.18:755,54,0	1/1:1,10:11:27.09:377,27,0	1/1:2,10:12:16.77:287,17,0	1/1:0,9:9:27.09:372,27,0	1/1:2,9:11:27.07:358,27,0	1/1:1,8:9:27.09:377,27,0	0/1:2,7:9:29.98:269,0,30	0/0:17,0:17:48.12:0,48,807	1/1:0,1:1:3.01:42,3,0	1/1:1,14:15:39.13:545,39,0	1/1:1,17:18:45.14:607,45,0	1/1:0,3:3:6.02:84,6,0	1/1:1,7:8:15.05:209,15,0	1/1:0,15:15:39.13:541,39,0	1/1:3,5:8:12.04:168,12,0	1/1:2,17:19:42.14:587,42,0	1/1:0,22:22:57.19:797,57,0	1/1:1,11:12:33.11:461,33,0	1/1:0,6:6:18.06:252,18,0
chr10	44448959	.	ATT	A	6329.97	PASS	AB=0.745;AC=40;AF=0.741;AN=54;BaseQRankSum=10.905;DP=362;FS=7.558;HRun=6;HaplotypeScore=116.3060;InbreedingCoeff=0.7498;MQ=58.20;MQ0=2;MQRankSum=-11.575;QD=23.36;ReadPosRankSum=0.077;VQSLOD=2.8659;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:21,9:30:64.37:688,64,0	0/0:8,0:8:21.07:0,21,378	0/0:15,0:10:21.02:0,21,297	0/1:12,0:11:4.55:5,0,91	1/1:18,2:19:38.96:354,39,0	0/0:17,0:17:51.17:0,51,877	0/0:11,0:11:33.10:0,33,567	1/1:7,14:21:36.10:460,36,0	0/0:13,0:13:39.13:0,39,687	1/1:3,12:15:33.10:439,33,0	1/1:0,9:9:24.08:319,24,0	1/1:0,9:9:24.08:315,24,0	1/1:2,8:10:19.47:263,19,0	1/1:2,8:10:21.07:272,21,0	1/1:1,5:6:15.05:195,15,0	0/1:3,5:8:35.98:178,0,36	0/0:20,0:20:54.15:0,54,893	1/1:1,2:3:3.01:40,3,0	1/1:6,7:13:33.10:395,33,0	1/1:17,4:21:45.07:452,45,0	1/1:2,1:3:6.01:67,6,0	1/1:0,11:9:15.01:174,15,0	1/1:4,15:19:39.09:482,39,0	1/1:1,4:5:2.60:24,3,0	1/1:2,12:14:27.09:354,27,0	1/1:10,8:18:39.11:471,39,0	1/1:7,5:12:35.91:382,36,0	./.
chr10	44448962	.	T	TTC	5021.97	PASS	AB=1.000;AC=38;AF=0.704;AN=54;BaseQRankSum=11.507;DP=375;FS=10.508;HRun=0;HaplotypeScore=134.5195;InbreedingCoeff=0.7737;MQ=57.10;MQ0=2;MQRankSum=-12.311;QD=18.20;ReadPosRankSum=-0.581;VQSLOD=4.6873;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:13,18:31:65.44:597,65,0	0/0:7,0:7:21.07:0,21,321	0/0:15,0:10:21.04:0,21,273	0/0:14,0:11:13.86:0,14,107	1/1:7,14:20:42.28:344,42,0	0/0:18,0:18:51.16:0,51,760	0/0:11,0:11:33.10:0,33,485	1/1:22,0:22:38.79:311,39,0	0/0:14,0:14:39.13:0,39,596	1/1:16,0:16:41.76:376,42,0	1/1:14,0:14:25.34:189,25,0	1/1:9,0:9:23.87:187,24,0	1/1:10,0:10:23.76:200,24,0	1/1:9,0:9:23.84:185,24,0	1/1:6,0:6:17.81:137,18,0	0/1:7,0:7:25.02:114,0,25	0/0:20,0:20:54.15:0,54,780	1/1:3,0:3:5.91:40,6,0	1/1:9,5:14:35.89:356,36,0	1/1:7,15:22:50.09:481,50,0	1/1:2,1:3:5.97:49,6,0	1/1:11,0:9:13.96:94,14,0	1/1:18,0:18:38.27:316,38,0	1/1:7,0:7:8.83:66,9,0	0/1:16,0:15:12.47:173,0,12	1/1:12,8:20:44.62:388,45,0	1/1:10,7:17:41.91:420,42,0	./.
chr10	44448968	.	TTC	T	1236.03	PASS	AB=0.801;AC=12;AF=0.222;AN=54;BaseQRankSum=5.323;DP=387;FS=2.869;HRun=0;HaplotypeScore=146.3355;InbreedingCoeff=0.3948;MQ=52.21;MQ0=3;MQRankSum=-4.576;QD=8.70;ReadPosRankSum=0.789;VQSLOD=3.5053;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,17:31:14.98:359,15,0	0/0:7,0:7:21.06:0,21,336	0/0:12,0:5:14.97:0,15,179	0/0:17,0:11:9.32:0,9,190	1/1:8,14:22:24.05:219,24,0	0/0:18,0:18:54.17:0,54,876	0/0:12,0:12:36.09:0,36,540	0/0:18,0:18:10.97:0,11,75	0/0:14,0:14:42.13:0,42,698	0/0:14,0:14:22.39:0,22,88	0/0:17,0:17:4.44:0,4,85	0/0:10,0:10:2.47:0,2,27	0/0:11,0:11:4.24:0,4,52	0/0:10,0:10:8.06:0,8,48	0/0:9,0:9:18.62:0,19,95	0/0:8,0:8:4.71:0,5,83	0/0:20,0:20:53.89:0,54,863	0/0:2,0:2:1.55:0,2,4	0/1:11,5:16:16.60:189,0,17	1/1:8,15:23:34.61:307,35,0	0/1:2,1:3:3.95:53,0,4	0/0:12,0:10:0.48:0,0,13	0/0:17,0:17:16.30:0,16,70	0/1:9,0:9:12.78:13,0,30	0/0:17,0:16:24.06:0,24,141	0/1:10,8:18:49.55:102,0,50	1/1:13,6:19:1.19:150,1,0	./.
chr10	44448970	.	C	CT	3790.96	PASS	AB=0.529;AC=39;AF=0.722;AN=54;BaseQRankSum=9.545;DP=397;FS=11.715;HRun=8;HaplotypeScore=134.0492;InbreedingCoeff=0.8317;MQ=50.54;MQ0=3;MQRankSum=-9.845;QD=12.68;ReadPosRankSum=-3.358;VQSLOD=1.1187;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:29,1:31:25.25:118,25,0	0/0:7,0:7:18.01:0,18,165	0/0:12,0:5:11.64:0,12,83	0/0:15,0:9:14.09:0,14,108	1/1:19,0:23:8.07:37,8,0	0/0:19,0:19:47.99:0,48,433	0/0:12,0:12:27:0,27,242	1/1:2,16:18:42.12:482,42,0	0/0:14,0:14:39.02:0,39,357	1/1:5,11:16:30.08:336,30,0	1/1:0,17:17:42.12:478,42,0	1/1:4,7:11:21.06:233,21,0	1/1:3,7:10:20.65:215,21,0	1/1:3,9:12:21.06:240,21,0	1/1:4,5:9:9.03:104,9,0	0/1:1,8:9:3.40:218,0,3	0/0:19,0:19:54.03:0,54,493	1/1:0,2:2:3.01:34,3,0	1/1:13,1:17:27.51:135,28,0	1/1:20,0:24:26.06:89,26,0	1/1:2,0:3:4.72:16,5,0	1/1:0,11:10:17.99:188,18,0	1/1:3,14:17:30.09:346,30,0	1/1:0,12:12:15.51:170,16,0	1/1:7,10:16:21.06:240,21,0	1/1:16,0:18:16.37:55,16,0	1/1:12,0:20:8.14:56,8,0	./.
chr10	44449129	.	C	CAT	10569.67	PASS	AB=0.526;AC=41;AF=0.732;AN=56;BaseQRankSum=13.502;DP=386;FS=14.873;HRun=0;HaplotypeScore=122.9217;InbreedingCoeff=0.8306;MQ=74.53;MQ0=0;MQRankSum=-11.870;QD=38.16;ReadPosRankSum=1.425;VQSLOD=5.6676;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,16:24:45.15:788,45,0	0/0:6,0:6:18.06:0,18,258	0/0:13,0:14:23.94:0,24,301	0/0:10,0:10:2.73:0,3,154	1/1:2,16:18:24.08:438,24,0	0/0:20,0:20:60.20:0,60,860	0/0:12,0:12:36.12:0,36,516	1/1:4,14:18:42.10:734,42,0	0/0:20,0:20:60.20:0,60,858	1/1:0,20:20:57.20:1043,57,0	1/1:2,16:18:33.11:599,33,0	1/1:2,9:11:30.10:548,30,0	1/1:2,9:11:27.09:493,27,0	1/1:0,8:8:18.06:329,18,0	1/1:1,13:14:33.11:603,33,0	0/1:1,9:10:12.13:464,0,12	0/0:27,0:27:75.25:0,75,1071	1/1:0,6:6:18.06:329,18,0	1/1:5,6:11:27.09:454,27,0	1/1:4,17:21:33.11:602,33,0	1/1:0,7:7:9.03:164,9,0	1/1:1,12:13:24.08:438,24,0	1/1:2,12:14:30.10:548,30,0	1/1:1,6:7:6.02:110,6,0	1/1:2,10:12:24.08:439,24,0	1/1:1,13:14:39.08:599,39,0	1/1:2,15:17:42.14:767,42,0	1/1:3,0:3:6.02:81,6,0
chr10	44449447	.	CT	C	2416.84	PASS	AB=1.000;AC=16;AF=0.296;AN=54;BaseQRankSum=-0.255;DP=450;FS=0.845;HRun=2;HaplotypeScore=139.6293;InbreedingCoeff=0.8305;MQ=72.28;MQ0=0;MQRankSum=-1.274;QD=15.59;ReadPosRankSum=1.677;VQSLOD=3.7352;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:13,4:17:49.81:422,50,0	0/0:14,0:14:42.13:0,42,611	0/0:26,1:26:17.94:0,18,729	0/0:21,1:18:51.01:0,51,699	1/1:21,6:27:64.15:458,64,0	0/0:24,0:23:66.56:0,67,1007	0/0:6,0:6:18.05:0,18,248	0/0:37,0:37:44.98:0,45,524	0/0:18,0:18:51.16:0,51,733	0/1:22,0:22:3.80:4,0,209	0/0:14,0:14:36.70:0,37,228	0/0:14,0:14:35.58:0,36,256	0/0:14,0:14:38.18:0,38,248	0/0:16,0:16:0.45:0,0,199	0/0:17,0:17:37.77:0,38,214	0/0:7,0:7:20.40:0,20,121	0/0:19,0:19:57.19:0,57,854	0/1:8,0:8:1.30:1,0,102	1/1:9,11:20:47.36:409,47,0	1/1:10,4:14:37.90:308,38,0	1/1:2,5:7:13.59:71,14,0	0/0:7,0:7:17.71:0,18,126	0/0:13,0:13:29.85:0,30,193	0/0:7,0:7:17.47:0,17,104	0/0:16,0:16:16.60:0,17,210	1/1:14,2:16:32.05:430,32,0	1/1:14,10:24:68.50:505,68,0	./.
chr10	44449453	.	T	TC	3657.08	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=0.366;DP=481;FS=0.000;HRun=3;HaplotypeScore=153.6379;InbreedingCoeff=0.9699;MQ=72.13;MQ0=0;MQRankSum=-1.996;QD=25.94;ReadPosRankSum=0.964;VQSLOD=2.9351;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:12,5:17:47.82:492,48,0	0/0:14,0:14:42.14:0,42,545	0/0:28,0:27:69.25:0,69,816	0/0:22,0:19:54.13:0,54,647	1/1:18,9:27:70.90:657,71,0	0/0:24,0:24:70.10:0,70,884	0/0:7,0:7:18.06:0,18,234	0/0:42,0:42:66.49:0,66,419	0/0:16,0:16:45.12:0,45,556	0/0:21,0:21:26.03:0,26,196	0/0:15,0:15:16.87:0,17,160	0/0:14,0:14:34.34:0,34,213	0/0:16,0:16:34.95:0,35,185	0/0:17,0:17:21.07:0,21,182	0/0:19,0:19:35.54:0,36,165	0/0:9,0:9:22.40:0,22,132	0/0:21,0:21:63.13:0,63,756	0/0:7,0:7:18.21:0,18,92	1/1:10,10:20:53.91:586,54,0	1/1:12,5:17:38.66:367,39,0	1/1:2,6:8:14.67:101,15,0	0/0:11,0:11:17.18:0,17,99	0/0:14,0:14:28.42:0,28,156	0/0:8,0:8:16.71:0,17,83	0/0:15,0:15:36.43:0,36,189	1/1:15,4:19:48.19:667,48,0	1/1:17,11:28:77.19:698,77,0	1/1:0,5:5:6.02:90,6,0
chr10	44450907	.	T	TA	14816.36	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=1.007;DP=614;FS=0.000;HRun=7;HaplotypeScore=75.4381;InbreedingCoeff=0.9907;MQ=60.61;MQ0=8;MQRankSum=1.741;QD=29.57;ReadPosRankSum=1.760;VQSLOD=5.1522;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,33:37:93.15:1102,93,0	0/0:6,0:6:18.03:0,18,174	0/0:21,0:14:19.66:0,20,261	0/0:16,1:14:27.01:0,27,224	1/1:2,25:27:75.23:906,75,0	0/0:26,0:26:66.10:0,66,637	0/0:9,0:9:24.03:0,24,226	1/1:0,36:33:90.27:1087,90,0	0/0:11,0:11:33.05:0,33,319	1/1:9,21:28:60.18:725,60,0	1/1:4,19:23:57.17:687,57,0	1/1:1,19:20:54.17:652,54,0	1/1:2,13:15:24.07:290,24,0	1/1:1,13:14:39.12:471,39,0	1/1:0,27:27:66.20:797,66,0	1/1:1,22:23:60.18:725,60,0	0/0:23,0:23:63.01:0,63,589	1/1:3,15:18:42.13:507,42,0	1/1:13,10:14:26.67:326,27,0	1/1:3,18:21:48.15:580,48,0	1/1:0,6:6:12.04:145,12,0	1/1:4,14:18:45.05:515,45,0	1/1:0,29:29:78.24:942,78,0	1/1:1,24:25:69.21:833,69,0	1/1:1,32:33:90.28:1087,90,0	1/1:3,21:24:63.18:750,63,0	1/1:3,29:31:84.23:1000,84,0	1/1:1,19:19:57.17:688,57,0
chr10	44451261	.	A	AG	10734.79	PASS	AC=26;AF=0.481;AN=54;BaseQRankSum=17.620;DP=595;FS=15.174;HRun=1;HaplotypeScore=86.2939;InbreedingCoeff=0.9877;MQ=57.86;MQ0=7;MQRankSum=1.603;QD=39.91;ReadPosRankSum=0.536;VQSLOD=3.5499;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,108,1401	0/0:17,0:17:48.16:0,48,623	0/0:22,0:12:33.09:0,33,402	0/0:23,0:19:51.16:0,51,652	0/0:30,0:30:87.22:0,87,1070	0/0:26,0:26:78.22:0,78,984	0/0:16,0:16:45.12:0,45,557	1/1:2,23:24:63.18:883,63,0	0/0:12,0:12:36.07:0,36,424	1/1:0,27:27:81.26:1187,81,0	1/1:0,22:22:63.13:914,63,0	1/1:1,16:17:48.16:719,48,0	1/1:0,20:20:60.20:898,60,0	1/1:0,15:15:42.14:629,42,0	1/1:1,29:30:75.25:1123,75,0	1/1:1,18:19:9.23:635,9,0	0/0:19,0:19:57.19:0,57,738	1/1:0,17:17:48.13:694,48,0	0/0:22,0:18:54.14:0,54,672	0/0:29,0:29:81.24:0,81,1024	0/0:18,0:18:54.18:0,54,700	1/1:0,10:10:30.10:449,30,0	1/1:1,22:23:54.17:808,54,0	1/1:2,13:15:39.13:584,39,0	1/1:0,29:29:81.27:1212,81,0	0/0:18,1:19:12.23:0,12,656	0/0:34,0:34:99:0,102,1294	./.
chr10	44451592	.	T	TA	12733.01	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=15.673;DP=576;FS=2.178;HRun=2;HaplotypeScore=112.0174;InbreedingCoeff=0.9976;MQ=62.81;MQ0=0;MQRankSum=-2.849;QD=42.59;ReadPosRankSum=3.651;VQSLOD=4.1942;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,26:26:75.26:1197,75,0	0/0:11,0:11:33.11:0,33,461	0/0:14,0:13:39.12:0,39,529	0/0:11,0:11:29.89:0,30,381	1/1:1,20:21:57.19:907,57,0	0/0:24,0:24:72.20:0,72,985	0/0:16,0:16:48.16:0,48,671	0/0:31,0:31:84.27:0,84,1157	0/0:18,0:18:54.17:0,54,740	0/0:25,0:25:72.24:0,72,1007	0/0:21,0:21:63.20:0,63,863	1/1:0,14:14:42.14:670,42,0	1/1:0,19:19:51.17:813,51,0	1/1:1,23:24:66.10:1052,66,0	0/0:19,0:19:57.17:0,57,766	0/0:25,0:25:75.20:0,75,970	0/0:28,0:28:84.20:0,84,1123	0/0:18,0:18:54.18:0,54,753	1/1:1,15:12:36.11:552,36,0	1/1:2,40:42:99:1710,108,0	1/1:1,9:10:27.09:417,27,0	1/1:0,18:18:54.18:861,54,0	1/1:2,17:19:45.15:704,45,0	1/1:0,18:18:48.16:766,48,0	0/0:16,0:16:48.16:0,48,665	1/1:4,38:42:78.42:1794,78,0	1/1:0,24:24:66.22:1049,66,0	1/1:0,6:6:15.05:239,15,0
chr10	44451890	.	ACATCTGTGCCC	A	12182.75	PASS	AB=0.553;AC=14;AF=0.250;AN=56;BaseQRankSum=13.612;DP=593;FS=1.202;HRun=0;HaplotypeScore=206.2458;InbreedingCoeff=0.7962;MQ=56.65;MQ0=2;MQRankSum=-14.028;QD=74.29;ReadPosRankSum=2.785;VQSLOD=4.6480;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:2,11:13:99:797,0,99	0/0:7,0:7:21.07:0,21,977	0/0:21,0:17:48.16:0,48,2411	0/0:18,0:18:54.19:0,54,2597	1/1:5,25:30:69.15:2124,69,0	0/0:32,0:32:90.28:0,90,4658	0/0:17,0:17:45.14:0,45,2410	0/0:32,0:32:96.32:0,96,4833	0/0:19,0:19:57.18:0,57,3000	0/0:28,0:28:78.26:0,78,4357	0/0:29,0:29:84.29:0,84,4644	0/0:14,0:14:42.13:0,42,2142	0/0:16,0:16:48.16:0,48,2562	0/0:11,0:11:30.10:0,30,1693	0/0:24,0:24:72.25:0,72,3824	0/0:22,0:22:60.21:0,60,3460	0/0:28,0:28:77.01:0,77,4494	0/0:24,0:24:68.90:0,69,3819	1/1:4,10:12:27.05:876,27,0	1/1:2,33:35:99:3055,99,0	1/1:2,5:7:12.04:428,12,0	0/0:21,0:21:63.20:0,63,3307	0/0:31,0:31:81.28:0,81,4381	0/0:14,0:14:35.78:0,36,1933	0/0:21,0:21:60.19:0,60,3185	0/1:6,20:26:99:2020,0,280	1/1:4,29:33:69.24:2454,69,0	1/1:0,6:6:12.04:428,12,0
chr10	44453297	.	G	GAA	7672.30	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-13.740;DP=611;FS=4.602;HRun=7;HaplotypeScore=74.9858;InbreedingCoeff=0.9988;MQ=62.44;MQ0=1;MQRankSum=-0.978;QD=40.59;ReadPosRankSum=1.035;VQSLOD=4.4871;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,25:28:57.98:1071,58,0	0/0:9,0:9:24.07:0,24,280	0/0:14,0:13:24.05:0,24,277	0/0:12,0:12:26.95:0,27,298	1/1:1,37:38:99:1671,105,0	0/0:28,0:28:81.22:0,81,932	0/0:18,0:18:48.14:0,48,559	0/0:37,0:37:99:0,105,1206	0/0:11,0:11:30.06:0,30,336	0/0:28,0:28:81.24:0,81,944	0/0:25,0:25:66.19:0,66,769	0/0:15,0:15:45.13:0,45,523	0/0:20,0:20:57.17:0,57,664	0/0:15,0:15:45.12:0,45,514	0/0:24,0:23:72.20:0,72,829	0/0:23,0:23:66.19:0,66,769	0/0:22,0:22:57.17:0,57,664	0/0:23,0:23:51.10:0,51,579	1/1:2,10:13:30.08:464,30,0	1/1:4,20:24:57.16:907,57,0	1/1:0,11:11:30.06:463,30,0	0/0:30,0:30:84.23:0,84,968	0/0:22,0:22:57.16:0,57,664	0/0:22,0:22:51.12:0,51,583	0/0:24,0:24:69.20:0,69,804	1/1:4,20:25:31.25:979,31,0	1/1:2,34:36:87.30:1428,87,0	1/1:0,14:14:42.14:689,42,0
chr10	44453582	.	A	AG	5111.91	PASS	AB=0.920;AC=15;AF=0.268;AN=56;BaseQRankSum=12.303;DP=579;FS=11.924;HRun=4;HaplotypeScore=109.1567;InbreedingCoeff=0.9082;MQ=58.34;MQ0=2;MQRankSum=-0.763;QD=27.93;ReadPosRankSum=0.605;VQSLOD=3.3203;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:33.09:0,33,374	0/0:17,0:17:51.14:0,51,570	0/0:15,0:11:26.24:0,26,257	0/0:9,0:9:18.05:0,18,201	0/0:26,0:26:72.19:0,72,807	0/0:16,0:16:48.14:0,48,544	0/0:17,0:17:42.10:0,42,467	1/1:6,13:15:36.04:447,36,0	0/0:15,0:15:42.12:0,42,476	1/1:1,26:27:75.25:1025,75,0	1/1:3,22:25:54.18:739,54,0	0/0:13,0:13:39.11:0,39,442	0/0:27,0:27:78.21:0,78,875	0/0:22,0:22:57.16:0,57,647	1/1:0,17:17:48.16:656,48,0	1/1:6,21:27:32.18:827,32,0	0/0:25,0:25:57.16:0,57,645	1/1:2,22:24:23.19:704,23,0	0/0:31,0:25:66.19:0,66,748	0/0:28,0:27:78.20:0,78,872	0/0:25,0:24:63.15:0,63,697	0/0:25,0:25:69.18:0,69,773	0/0:23,0:23:60.17:0,60,681	0/0:8,0:8:24.07:0,24,272	1/1:2,19:21:51.17:697,51,0	0/1:21,2:23:15.90:16,0,614	0/0:31,0:31:87.24:0,87,978	0/0:8,0:9:23.08:0,23,233
chr10	44454289	.	G	GA	4700.27	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=1.232;DP=609;FS=3.159;HRun=8;HaplotypeScore=104.2635;InbreedingCoeff=0.9950;MQ=56.07;MQ0=2;MQRankSum=-2.719;QD=26.41;ReadPosRankSum=-0.902;VQSLOD=4.3266;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:23:49.79:0,50,488	0/0:7,0:7:21.01:0,21,192	0/0:12,0:10:30:0,30,267	0/0:15,0:9:18:0,18,163	0/0:42,0:42:99:0,105,961	0/0:30,0:31:80.08:0,80,720	0/0:17,0:17:48.03:0,48,439	1/1:8,29:35:63.15:703,63,0	0/0:19,0:19:51.02:0,51,467	1/1:4,27:31:81.19:909,81,0	1/1:2,24:25:69.21:796,69,0	0/0:15,0:15:45.02:0,45,412	0/0:24,0:24:69.02:0,69,627	0/0:21,0:21:54:0,54,488	1/1:3,22:25:60.18:692,60,0	1/1:3,15:19:47.97:534,48,0	0/0:22,0:22:56.96:0,57,509	1/1:2,16:18:23.70:526,24,0	0/0:26,0:23:51.01:0,51,467	0/0:29,0:29:81.02:0,81,736	0/0:14,0:14:42.02:0,42,384	0/0:23,0:23:65.99:0,66,590	0/0:17,0:17:42.01:0,42,384	0/0:8,0:8:21.01:0,21,192	1/1:6,15:22:48.10:539,48,0	0/0:25,0:25:69.03:0,69,631	0/0:33,0:33:78.02:0,78,709	0/0:8,0:7:18:0,18,165
chr10	44454584	.	GACA	G	7244.47	PASS	AB=0.576;AC=15;AF=0.268;AN=56;BaseQRankSum=2.550;DP=649;FS=0.000;HRun=0;HaplotypeScore=136.4361;InbreedingCoeff=0.8967;MQ=68.58;MQ0=0;MQRankSum=-0.096;QD=39.16;ReadPosRankSum=4.986;VQSLOD=5.3505;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,25:26:69.24:1126,69,0	0/0:11,0:11:27.09:0,27,588	0/0:22,0:18:51.15:0,51,1047	0/0:25,0:23:66.23:0,66,1375	1/1:1,30:31:75.26:1225,75,0	0/0:31,0:31:84.27:0,84,1802	0/0:16,0:16:45.15:0,45,969	0/0:32,0:32:90.30:0,90,1936	0/0:19,0:19:51.18:0,51,1134	0/0:35,0:35:90.30:0,90,1886	0/0:22,0:22:63.22:0,63,1384	0/0:20,0:20:54.19:0,54,1189	0/0:25,0:25:69.24:0,69,1510	0/0:30,0:30:81.28:0,81,1741	0/0:29,0:29:78.27:0,78,1675	0/0:19,0:19:51.16:0,51,1048	0/0:21,0:21:60.21:0,60,1294	0/0:16,0:16:48.16:0,48,1071	1/1:1,3:4:9.03:147,9,0	1/1:4,44:48:99:1956,120,0	1/1:0,16:16:42.14:686,42,0	0/0:18,0:18:54.19:0,54,1204	0/0:26,0:26:78.27:0,78,1689	0/0:22,0:22:66.23:0,66,1439	0/0:25,0:25:75.21:0,75,1619	1/1:1,15:16:42.14:686,42,0	0/1:10,28:38:99:1125,0,167	1/1:0,6:6:18.06:294,18,0
chr10	44454723	.	T	TG	5565.90	PASS	AB=0.599;AC=12;AF=0.214;AN=56;BaseQRankSum=-4.224;DP=768;FS=4.024;HRun=4;HaplotypeScore=126.6156;InbreedingCoeff=0.4560;MQ=53.88;MQ0=17;MQRankSum=7.337;QD=25.65;ReadPosRankSum=2.856;VQSLOD=3.4760;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:13,12:24:80.23:481,0,80	0/0:19,0:18:51.15:0,51,577	0/0:15,0:2:6.02:0,6,68	0/0:25,0:12:25.75:0,26,218	0/1:8,26:33:46.04:818,0,46	0/0:32,0:32:84.21:0,84,926	0/0:27,0:27:60.15:0,60,664	0/0:48,0:42:87.16:0,87,949	0/0:25,0:25:66.19:0,66,743	0/0:29,0:29:81.19:0,81,898	0/0:24,0:24:72.14:0,72,778	0/0:23,0:23:69.19:0,69,777	0/0:23,0:23:60.11:0,60,657	0/0:34,0:34:87.25:0,87,987	0/0:29,0:29:84.22:0,84,937	0/0:25,0:25:57.16:0,57,644	0/0:34,0:33:84.20:0,84,925	0/0:20,0:20:51.14:0,51,573	1/1:5,10:13:2.22:361,2,0	0/1:8,30:38:57.66:1028,0,58	1/1:6,30:36:81.27:1108,81,0	0/0:22,0:22:54.15:0,54,606	0/0:38,0:38:99:0,99,1099	0/0:23,0:23:63.18:0,63,711	0/0:36,0:34:87.24:0,87,981	1/1:3,26:29:13.34:916,13,0	0/1:12,25:37:99:814,0,140	1/1:0,3:3:3.01:41,3,0
chr10	44455283	.	TA	T	5020.35	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=12.263;DP=663;FS=2.573;HRun=2;HaplotypeScore=117.2692;InbreedingCoeff=0.9969;MQ=56.22;MQ0=1;MQRankSum=-1.449;QD=33.25;ReadPosRankSum=3.523;VQSLOD=4.5461;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:69.23:0,69,1033	0/0:14,0:14:42.14:0,42,627	0/0:12,0:12:36.09:0,36,493	0/0:18,0:15:45.14:0,45,615	0/0:21,0:21:63.20:0,63,919	0/0:31,0:31:93.28:0,93,1336	0/0:16,0:16:48.16:0,48,719	0/0:24,0:24:72.24:0,72,1079	0/0:21,0:21:60.20:0,60,885	0/0:31,0:31:84.24:0,84,1209	0/0:21,0:21:60.15:0,60,853	1/1:1,19:20:51.17:661,51,0	1/1:0,24:22:54.18:700,54,0	1/1:0,30:29:78.25:1012,78,0	0/0:39,0:39:96.20:0,96,1362	0/0:35,0:35:93.27:0,93,1347	0/0:27,0:27:81.22:0,81,1168	0/0:14,0:14:15.29:0,15,473	0/0:18,0:16:45.15:0,45,657	0/0:34,0:34:99:0,99,1405	0/0:18,0:18:54.18:0,54,809	1/1:1,25:26:72.23:934,72,0	1/1:0,29:29:84.27:1089,84,0	1/1:2,20:22:48.16:624,48,0	0/0:26,0:26:59.84:0,60,796	0/0:21,0:21:60.20:0,60,898	0/0:36,0:36:99:0,108,1496	0/0:11,0:11:33.11:0,33,495
chr10	44455300	.	AAACAACAAC	A	6620	PASS	AB=0.657;AC=17;AF=0.304;AN=56;BaseQRankSum=14.108;DP=686;FS=3.417;HRun=0;HaplotypeScore=232.2697;InbreedingCoeff=0.6046;MQ=54.27;MQ0=3;MQRankSum=-12.917;QD=22.14;ReadPosRankSum=1.785;VQSLOD=3.6966;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:57.20:0,57,2531	0/0:11,0:11:21.07:0,21,806	0/0:14,0:12:6.02:0,6,163	0/0:18,0:15:9.03:0,9,327	0/0:25,0:25:60.21:0,60,2451	0/0:33,0:34:69.24:0,69,2952	0/0:15,0:15:15.05:0,15,604	0/0:34,0:34:54.19:0,54,1602	0/0:24,0:24:57.17:0,57,2294	1/1:9,26:35:72.23:1802,72,0	1/1:9,11:20:27.04:664,27,0	0/1:6,1:24:13.01:99,0,13	0/1:12,0:22:6.84:7,0,53	0/1:15,1:28:82.44:82,0,110	1/1:13,25:38:54.66:1450,55,0	1/1:10,18:28:42.10:1099,42,0	0/0:30,0:30:63.22:0,63,2718	1/1:5,10:15:15.05:415,15,0	0/0:13,0:13:24.07:0,24,894	0/0:32,0:32:63.22:0,63,2644	0/0:20,0:20:42.12:0,42,1473	0/1:18,0:27:0.30:0,0,88	0/1:15,0:34:4.86:5,0,120	0/0:13,0:18:7.21:0,7,97	1/1:7,16:23:36.12:996,36,0	0/0:25,0:25:57.20:0,57,2425	0/0:36,0:36:84.29:0,84,3737	0/0:10,0:9:15.05:0,15,643
chr10	44456395	.	TAAAC	T	2786.54	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=10.712;DP=605;FS=7.512;HRun=0;HaplotypeScore=104.2552;InbreedingCoeff=0.9914;MQ=57.67;MQ0=3;MQRankSum=1.441;QD=26.54;ReadPosRankSum=1.472;VQSLOD=3.0852;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,99,2155	0/0:17,0:17:39.05:0,39,890	0/0:27,0:18:15.35:0,15,426	0/0:23,0:14:24.03:0,24,452	0/0:25,0:25:57.20:0,57,1383	0/0:21,0:21:57.16:0,57,1293	0/0:14,0:14:26.94:0,27,553	0/0:28,0:27:54.14:0,54,1073	0/0:15,0:15:33.11:0,33,813	0/0:22,0:22:42.14:0,42,1028	0/0:31,0:31:66.20:0,66,1491	1/1:3,12:15:27.09:449,27,0	1/1:3,16:19:44.99:746,45,0	1/1:2,11:13:27.09:449,27,0	0/0:18,0:18:45.12:0,45,1009	0/0:7,0:7:21.07:0,21,489	0/0:19,0:19:42.14:0,42,1017	0/0:22,0:22:66.04:0,66,1470	0/0:18,0:18:30.10:0,30,648	0/0:33,0:33:78.23:0,78,1796	0/0:16,0:16:36.12:0,36,869	1/1:3,17:20:44.81:614,45,0	1/1:3,19:22:29.65:466,30,0	1/1:7,9:15:15.05:250,15,0	0/0:28,0:28:51.16:0,51,1178	0/0:34,0:34:78.26:0,78,1847	0/0:30,0:30:84.20:0,84,1768	0/0:10,0:10:27.56:0,28,615
chr10	44456691	.	A	ACAT	8330.81	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=16.210;DP=710;FS=4.970;HRun=0;HaplotypeScore=108.1586;InbreedingCoeff=0.9962;MQ=89.95;MQ0=0;MQRankSum=-6.948;QD=54.81;ReadPosRankSum=2.691;VQSLOD=6.5558;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:60.20:0,60,963	0/0:11,0:11:33.11:0,33,530	0/0:23,0:23:60.20:0,60,947	0/0:34,0:34:51.62:0,52,976	0/0:34,0:34:99:0,99,1568	0/0:31,0:31:90.31:0,90,1447	0/0:11,0:11:30.08:0,30,453	0/0:37,0:37:99:0,99,1564	0/0:25,0:25:69.24:0,69,1107	0/0:35,0:35:96.33:0,96,1537	0/0:27,0:27:72.25:0,72,1157	1/1:4,29:33:87.30:1917,87,0	1/1:2,29:35:81.28:1785,81,0	1/1:3,29:32:81.28:1786,81,0	0/0:28,0:28:84.27:0,84,1327	0/0:19,0:19:57.18:0,57,893	0/0:22,0:22:63.21:0,63,1012	0/0:19,0:19:45.15:0,45,723	0/0:23,0:23:51.17:0,51,798	0/0:36,0:36:99:0,102,1635	0/0:16,0:16:42.14:0,42,675	1/1:1,24:25:69.24:1519,69,0	1/1:3,15:18:45.15:993,45,0	1/1:2,7:9:15.05:331,15,0	0/0:26,0:26:72.25:0,72,1154	0/0:33,0:33:87.30:0,87,1395	0/0:36,0:36:99:0,102,1561	0/0:10,0:10:24.08:0,24,385
chr10	44457263	.	A	AG	5735.31	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=16.183;DP=718;FS=1.641;HRun=1;HaplotypeScore=85.0498;InbreedingCoeff=1.0000;MQ=81.55;MQ0=0;MQRankSum=-7.231;QD=37.24;ReadPosRankSum=3.692;VQSLOD=5.3987;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:96.27:0,96,1255	0/0:20,0:20:57.18:0,57,782	0/0:17,0:17:48.60:0,49,617	0/0:24,0:25:69.17:0,69,878	0/0:22,0:22:54.17:0,54,735	0/0:20,0:20:57.16:0,57,736	0/0:16,0:16:48.16:0,48,671	0/0:37,0:37:99:0,108,1404	0/0:27,0:27:81.23:0,81,1071	0/0:47,0:47:99:0,141,1890	0/0:36,0:36:99:0,105,1413	1/1:1,25:26:66.22:1006,66,0	1/1:1,25:25:60.12:884,60,0	1/1:1,31:32:81.27:1204,81,0	0/0:36,0:36:99:0,108,1413	0/0:28,0:28:84.24:0,84,1103	0/0:16,0:16:48.13:0,48,651	0/0:20,0:19:60.15:0,60,791	0/0:23,0:23:65.88:0,66,881	0/0:24,0:24:72.22:0,72,972	0/0:21,0:21:63.20:0,63,863	1/1:0,24:24:68.76:932,69,0	1/1:1,29:30:78.19:1152,78,0	1/1:0,16:16:39.04:557,39,0	0/0:28,0:28:84.27:0,84,1159	0/0:23,0:23:69.21:0,69,920	0/0:30,0:30:87.27:0,87,1179	0/0:14,0:14:39.13:0,39,540
chr10	44457442	.	ACTAAGAC	A	2593.18	PASS	AB=0.947;AC=13;AF=0.232;AN=56;BaseQRankSum=9.817;DP=385;FS=3.400;HRun=0;HaplotypeScore=91.1757;InbreedingCoeff=0.9043;MQ=100.98;MQ0=0;MQRankSum=-10.033;QD=37.05;ReadPosRankSum=3.007;VQSLOD=3.3428;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:17,1:18:0.87:1,0,1959	0/0:4,0:4:12.04:0,12,492	0/0:22,0:22:62.24:0,62,2237	0/0:34,0:34:91.52:0,92,3327	0/0:7,0:7:18.06:0,18,723	0/0:13,0:12:39.12:0,39,1478	0/0:13,0:13:33.11:0,33,1305	0/0:25,0:26:69.24:0,69,2750	0/0:14,0:14:39.13:0,39,1575	0/0:14,0:14:42.14:0,42,1618	0/0:11,0:11:33.10:0,33,1246	1/1:0,12:12:33.11:889,33,0	1/1:1,7:8:21.07:536,21,0	1/1:0,9:9:24.08:646,24,0	0/0:21,0:21:60.21:0,60,2453	0/0:14,0:14:42.14:0,42,1721	0/0:12,0:12:33.11:0,33,1337	0/0:12,0:12:30.10:0,30,1191	0/0:14,0:14:42.14:0,42,1693	0/0:11,0:11:33.11:0,33,1275	0/0:32,0:32:87.30:0,87,3509	1/1:0,6:6:12.04:167,12,0	1/1:1,3:4:6.02:118,6,0	1/1:0,13:13:18.06:415,18,0	0/0:10,0:10:30.10:0,30,1203	0/0:10,0:10:27.09:0,27,1102	0/0:13,0:13:39.13:0,39,1552	0/0:8,0:8:24.08:0,24,968
chr10	44457578	.	GCATACACA	G	1654.35	PASS	AB=0.985;AC=19;AF=0.339;AN=56;BaseQRankSum=10.447;DP=571;FS=5.670;HRun=0;HaplotypeScore=159.2637;InbreedingCoeff=-0.3806;MQ=58.30;MQ0=18;MQRankSum=-5.144;QD=5.32;ReadPosRankSum=1.973;VQSLOD=2.3958;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:8.65:0,9,313	0/1:10,1:11:1.28:1,0,83	0/0:32,0:10:5.79:0,6,65	0/0:44,0:16:31.72:0,32,246	0/1:21,1:23:77.19:77,0,229	0/0:20,0:19:44.90:0,45,626	0/0:37,0:37:92.66:0,93,1678	0/0:24,0:24:55.59:0,56,449	0/0:19,0:19:44.62:0,45,770	0/1:22,0:22:99:193,0,397	0/1:20,0:20:99:218,0,182	0/1:12,0:12:41.47:41,0,367	0/1:10,0:9:36.48:36,0,137	0/1:24,0:23:99:109,0,369	0/1:16,2:18:99:144,0,142	0/1:26,0:26:99:377,0,371	0/0:16,0:15:14.94:0,15,117	0/0:21,0:21:31.53:0,32,294	0/1:19,0:19:73.09:73,0,298	0/1:17,0:16:99:117,0,172	0/0:17,0:17:32.88:0,33,321	0/1:20,0:19:26.49:26,0,147	0/1:11,0:11:33.68:34,0,100	0/1:23,0:21:73.63:80,0,74	0/1:19,0:19:18.65:19,0,160	0/1:16,0:15:99:140,0,183	0/1:18,0:18:85.37:85,0,148	1/1:2,0:2:4.56:42,5,0
chr10	44457581	.	TACACACAC	T	2585.40	PASS	AB=0.737;AC=25;AF=0.500;AN=50;BaseQRankSum=0.128;DP=583;FS=0.765;HRun=0;HaplotypeScore=158.7677;InbreedingCoeff=0.5145;MQ=58.08;MQ0=18;MQRankSum=-5.167;QD=9.47;ReadPosRankSum=1.251;VQSLOD=2.5629;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:23,9:32:3:56,3,0	1/1:7,0:11:5.80:32,6,0	./.	./.	0/1:16,8:24:11.62:146,0,12	0/0:16,0:21:9.03:0,9,327	0/0:35,0:37:35.91:0,36,1105	1/1:22,0:22:2.95:20,3,0	0/0:18,0:20:18.06:0,18,488	0/1:15,7:22:24.01:349,0,24	1/1:13,7:20:17.79:373,18,0	0/0:14,0:14:15.05:0,15,494	0/0:10,0:9:6.02:0,6,183	0/0:24,0:23:18.06:0,18,551	1/1:10,8:19:9.03:225,9,0	0/1:15,10:26:76.63:547,0,77	./.	0/0:16,5:21:6.02:0,6,105	1/1:18,4:21:11.36:200,11,0	1/1:10,5:16:12:226,12,0	0/0:16,0:16:3.01:0,3,70	0/0:21,0:20:18.11:0,18,331	0/0:12,0:12:5.93:0,6,161	0/0:23,0:21:3.01:0,3,113	1/1:10,8:20:8.92:99,9,0	1/1:10,5:15:15.04:268,15,0	1/1:9,10:19:6.02:150,6,0	1/1:0,0:2:5.91:72,6,0
chr10	44458791	.	CTG	C	6079.95	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=16.835;DP=752;FS=6.540;HRun=0;HaplotypeScore=104.0451;InbreedingCoeff=0.9948;MQ=81.91;MQ0=0;MQRankSum=-3.182;QD=38.97;ReadPosRankSum=3.350;VQSLOD=6.9028;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:87.30:0,87,1622	0/0:6,0:6:15.05:0,15,274	0/0:29,0:27:54.17:0,54,1144	0/0:26,0:24:19.53:0,20,834	0/0:24,0:24:66.21:0,66,1188	0/0:22,0:22:63.22:0,63,1179	0/0:24,0:24:72.25:0,72,1348	0/0:36,0:35:99:0,102,1878	0/0:29,0:29:87.30:0,87,1600	0/0:34,0:34:88.08:0,88,1728	0/0:28,0:28:78.27:0,78,1444	1/1:0,24:24:66.22:972,66,0	1/1:0,19:19:51.17:741,51,0	1/1:0,30:30:81.27:1193,81,0	0/0:31,0:31:90.29:0,90,1648	0/0:26,0:26:78.27:0,78,1448	0/0:32,0:32:96.33:0,96,1788	0/0:29,0:29:84.26:0,84,1523	0/0:20,0:20:54.17:0,54,978	0/0:25,0:25:63.20:0,63,1137	0/0:58,0:58:99:0,172,3164	1/1:1,20:21:54.18:789,54,0	1/1:1,24:25:63.21:927,63,0	1/1:2,35:37:99:1458,99,0	0/0:14,0:14:42.14:0,42,770	0/0:28,0:28:81.28:0,81,1512	0/0:37,0:37:99:0,111,2077	0/0:8,0:8:21.07:0,21,393
chr10	44459086	.	GTC	G	1413.04	PASS	AB=0.894;AC=17;AF=0.304;AN=56;BaseQRankSum=6.415;DP=745;FS=30.646;HRun=0;HaplotypeScore=198.5367;InbreedingCoeff=-0.2738;MQ=52.74;MQ0=14;MQRankSum=-4.188;QD=3.38;ReadPosRankSum=0.498;VQSLOD=1.5155;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:27,2:29:91.60:92,0,734	0/0:9,0:9:21.04:0,21,289	0/0:23,0:13:39.07:0,39,573	0/0:26,0:16:26.94:0,27,432	0/0:33,10:40:78.27:0,78,1366	0/0:25,0:25:69.17:0,69,1164	0/0:32,0:32:84.27:0,84,1400	0/0:40,0:39:57.21:0,57,1005	0/0:22,0:22:60.19:0,60,1020	0/1:39,6:43:99:310,0,1325	0/1:24,2:23:44.96:45,0,460	0/1:12,0:12:20.92:21,0,69	0/1:25,0:26:24.33:52,0,24	0/1:15,0:16:3.23:3,0,37	0/1:26,16:39:99:145,0,449	0/1:27,7:31:91.14:91,0,823	0/0:29,0:29:31.68:0,32,699	0/1:15,1:16:99:146,0,331	0/1:27,1:26:30.84:31,0,1040	0/1:25,7:27:99:106,0,527	0/0:23,9:31:22.65:0,23,867	0/1:26,0:26:6.49:16,0,6	0/0:24,0:22:1.68:0,2,96	1/1:15,2:17:5.78:33,6,0	0/0:17,4:19:18:0,18,311	0/1:16,6:20:99:196,0,458	0/1:27,7:34:99:113,0,1082	0/1:9,4:12:99:172,0,171
chr10	44459096	.	C	CTCTT	1712.49	PASS	AB=0.850;AC=10;AF=0.179;AN=56;BaseQRankSum=12.306;DP=746;FS=0.997;HRun=0;HaplotypeScore=232.1728;InbreedingCoeff=0.7535;MQ=58.93;MQ0=6;MQRankSum=-10.593;QD=14.64;ReadPosRankSum=-5.571;VQSLOD=1.9765;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:41.47:0,41,992	0/0:7,0:7:18.91:0,19,251	0/0:34,0:22:39.33:0,39,814	0/0:44,0:27:29.64:0,30,624	0/0:43,0:43:93.32:0,93,1720	0/0:18,0:18:51.16:0,51,936	0/0:31,0:31:84.21:0,84,1386	0/0:31,0:31:76.09:0,76,1193	0/0:20,0:20:57.16:0,57,1009	0/0:39,0:38:99:0,102,1683	0/0:28,0:25:33.11:0,33,614	1/1:10,1:11:2.41:225,2,0	1/1:23,3:28:24.45:632,24,0	1/1:12,0:13:6.44:234,6,0	0/0:40,0:37:36.90:0,37,630	0/0:35,0:32:57.44:0,57,1071	0/0:29,0:29:60.98:0,61,994	0/0:13,0:13:23.45:0,23,414	0/0:28,0:28:75.11:0,75,1252	0/0:32,0:28:49.48:0,49,914	0/0:36,0:36:72.22:0,72,1285	1/1:14,9:25:41.51:436,42,0	0/1:28,1:26:0.81:330,0,1	0/1:7,3:11:7.99:8,0,78	0/0:22,0:20:21.01:0,21,391	0/0:21,0:19:42.65:0,43,610	0/0:34,0:34:74.42:0,74,1356	0/0:14,0:13:26.55:0,27,339
chr10	44459114	.	CTTTG	C	98.57	PASS	AB=0.714;AC=1;AF=0.018;AN=56;BaseQRankSum=5.723;DP=741;FS=4.917;HRun=0;HaplotypeScore=238.0162;InbreedingCoeff=-0.0281;MQ=68.89;MQ0=2;MQRankSum=-1.264;QD=9.86;ReadPosRankSum=-3.125;VQSLOD=2.5239;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:84.24:0,84,2226	0/0:8,0:8:21.03:0,21,521	0/0:43,0:36:77.91:0,78,2092	0/0:67,0:44:20.72:0,21,1108	0/0:32,2:34:90.31:0,90,2482	0/0:15,0:15:42.14:0,42,1172	0/0:24,0:24:72.20:0,72,1926	0/0:36,0:36:85.20:0,85,2632	0/0:21,0:21:60.20:0,60,1583	0/0:36,0:36:99:0,99,2471	0/0:24,1:24:70.95:0,71,1432	0/0:12,0:12:30.09:0,30,726	0/0:25,1:26:3.44:0,3,1510	0/0:16,0:16:10.51:0,11,941	0/0:33,1:33:72.10:0,72,1829	0/0:35,1:34:77.99:0,78,1988	0/0:30,0:30:78.27:0,78,2105	0/0:13,0:13:27.05:0,27,598	0/0:23,0:23:66.23:0,66,1671	0/0:28,2:27:68.93:0,69,1715	0/0:33,0:33:93.17:0,93,2418	0/0:21,0:21:41.53:0,42,780	0/0:25,1:24:53.88:0,54,995	0/0:7,0:7:8.84:0,9,58	0/0:20,2:21:48.16:0,48,1201	0/0:23,1:22:57.19:0,57,1518	0/0:34,1:35:45.60:0,46,2158	0/1:6,4:10:99:173,0,473
chr10	44459127	.	TCTCA	T	6726.87	PASS	AB=0.949;AC=19;AF=0.339;AN=56;BaseQRankSum=11.447;DP=734;FS=1.118;HRun=0;HaplotypeScore=204.0170;InbreedingCoeff=0.7393;MQ=75.34;MQ0=4;MQRankSum=-4.347;QD=26.80;ReadPosRankSum=2.365;VQSLOD=4.7449;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:94.19:0,94,2341	0/0:7,0:7:21.07:0,21,558	0/0:49,0:36:59.28:0,59,1194	0/0:69,0:46:24.26:0,24,726	0/0:36,0:36:99:0,99,2331	0/0:14,0:14:36.08:0,36,802	0/0:24,0:24:69.20:0,69,1620	0/0:42,0:42:99:0,117,2702	0/0:22,0:22:60.17:0,60,1480	1/1:2,34:36:99:1720,105,0	1/1:3,22:24:48.10:867,48,0	0/1:14,1:15:1.98:109,0,2	0/1:25,1:26:14.35:144,0,14	0/1:17,1:18:23.49:109,0,23	1/1:3,25:27:66.22:1175,66,0	1/1:2,27:27:63.22:1173,63,0	0/0:33,0:33:78.77:0,79,2249	1/1:2,12:14:18.01:303,18,0	0/0:23,0:23:63.18:0,63,1530	0/0:25,0:23:62.92:0,63,1515	0/0:31,0:31:87.20:0,87,1993	1/1:15,3:18:13.98:197,14,0	1/1:19,1:20:4.35:190,4,0	0/0:8,0:8:5.70:0,6,31	1/1:3,19:21:39.13:739,39,0	0/0:22,1:22:6.35:0,6,1492	0/0:29,0:29:72.25:0,72,1860	0/0:12,0:12:20.55:0,21,632
chr10	44459138	.	C	CTT	3935.59	PASS	AB=0.970;AC=13;AF=0.232;AN=56;BaseQRankSum=14.644;DP=737;FS=2.240;HRun=1;HaplotypeScore=192.2905;InbreedingCoeff=0.7185;MQ=73.75;MQ0=5;MQRankSum=-12.178;QD=22.23;ReadPosRankSum=-3.045;VQSLOD=0.8597;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,99,1466	0/0:8,0:8:24.07:0,24,346	0/0:44,0:29:41.22:0,41,587	0/0:72,0:46:23.52:0,24,571	0/0:37,0:37:99:0,102,1403	0/0:12,0:12:33.09:0,33,482	0/0:24,0:24:69.20:0,69,1007	0/0:41,0:41:99:0,120,1707	0/0:22,0:22:63.18:0,63,919	0/1:40,0:40:18.70:19,0,758	0/0:24,0:24:25.68:0,26,414	1/1:4,12:16:48.04:779,48,0	1/1:6,20:26:63.06:1055,63,0	1/1:6,12:18:50.99:790,51,0	0/1:29,0:29:4.61:5,0,532	0/0:31,0:30:37.69:0,38,672	0/0:34,0:34:70.29:0,70,1324	0/0:16,0:16:20.70:0,21,186	0/0:25,0:25:72.19:0,72,1019	0/0:23,0:23:66.18:0,66,945	0/0:29,0:29:78.23:0,78,1133	1/1:11,7:18:38.80:518,39,0	1/1:7,13:20:53.88:757,54,0	0/1:9,1:10:14.42:14,0,14	0/0:20,0:20:35.24:0,35,360	0/0:25,0:25:69.20:0,69,981	0/0:26,0:26:78.21:0,78,1115	0/0:10,0:10:9.30:0,9,348
chr10	44459171	.	CTT	C	1336.10	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=12.981;DP=625;FS=11.968;HRun=3;HaplotypeScore=151.4238;InbreedingCoeff=0.9958;MQ=67.79;MQ0=3;MQRankSum=-11.111;QD=16.10;ReadPosRankSum=1.604;VQSLOD=0.0664;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:99:0,99,1772	0/0:10,0:10:30.10:0,30,549	0/0:26,0:18:43.31:0,43,533	0/0:49,0:27:25.23:0,25,568	0/0:32,0:32:96.32:0,96,1802	0/0:11,0:11:30.09:0,30,561	0/0:25,0:25:75.25:0,75,1372	0/0:30,0:30:84.25:0,84,1464	0/0:27,0:27:81.26:0,81,1500	0/0:33,0:33:99:0,99,1834	0/0:22,0:22:66.21:0,66,1221	1/1:2,11:13:24.70:269,25,0	1/1:5,16:21:26.34:324,26,0	1/1:0,14:14:41.93:346,42,0	0/0:22,0:21:57.20:0,57,1075	0/0:23,0:22:57.18:0,57,1067	0/0:29,0:29:84.23:0,84,1528	0/0:14,0:14:30.10:0,30,554	0/0:27,0:27:72.03:0,72,1235	0/0:30,0:30:87.30:0,87,1664	0/0:17,0:17:51.17:0,51,928	1/1:3,9:12:19.68:173,20,0	1/1:3,11:14:32.93:268,33,0	1/1:0,9:9:17.94:143,18,0	0/0:18,0:18:36.12:0,36,695	0/0:31,0:31:93.31:0,93,1739	0/0:18,0:18:51.17:0,51,983	0/0:13,0:12:36.07:0,36,656
chr10	44459175	.	CTT	C	1355.21	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=13.016;DP=618;FS=11.945;HRun=3;HaplotypeScore=144.7314;InbreedingCoeff=0.9953;MQ=65.68;MQ0=3;MQRankSum=-10.533;QD=16.94;ReadPosRankSum=0.999;VQSLOD=0.1358;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,111,1945	0/0:9,0:9:27.09:0,27,521	0/0:25,0:19:37.90:0,38,543	0/0:49,2:25:21.34:0,21,618	0/0:35,0:35:99:0,105,1887	0/0:12,0:12:36.10:0,36,628	0/0:24,0:24:69.23:0,69,1293	0/0:26,0:26:78.25:0,78,1375	0/0:28,0:28:84.28:0,84,1575	0/0:32,0:32:96.32:0,96,1819	0/0:20,0:20:60.21:0,60,1157	1/1:1,11:12:25.02:273,25,0	1/1:3,16:19:26.67:328,27,0	1/1:0,14:14:41.95:350,42,0	0/0:21,0:20:54.11:0,54,967	0/0:21,0:20:54.17:0,54,1010	0/0:29,0:29:81.26:0,81,1495	0/0:14,0:14:30.04:0,30,505	0/0:23,0:23:69.22:0,69,1260	0/0:31,0:31:90.29:0,90,1661	0/0:17,0:17:48.12:0,48,814	1/1:2,9:11:19.42:174,19,0	1/1:4,11:15:33.41:273,33,0	1/1:0,9:9:17.95:144,18,0	0/0:17,0:17:36.12:0,36,695	0/0:30,0:30:87.25:0,87,1611	0/0:20,0:20:57.16:0,57,1004	0/0:15,0:14:42.08:0,42,737
chr10	44460535	.	GC	G	4207.89	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=12.661;DP=636;FS=3.327;HRun=4;HaplotypeScore=110.1726;InbreedingCoeff=0.9995;MQ=83.21;MQ0=0;MQRankSum=-0.710;QD=32.62;ReadPosRankSum=1.729;VQSLOD=3.4100;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:90.27:0,90,1216	0/0:13,0:13:36.12:0,36,504	0/0:17,0:17:45.12:0,45,606	0/0:29,0:29:75.16:0,75,986	0/0:30,0:30:84.28:0,84,1175	0/0:24,0:24:66.18:0,66,900	0/0:16,0:16:48.16:0,48,664	0/0:2,0:21:60.11:0,60,328	0/0:16,0:16:42.14:0,42,585	0/0:25,0:25:69.23:0,69,966	0/0:34,0:34:96.32:0,96,1339	1/1:1,22:23:63.19:754,63,0	1/1:0,24:24:69.21:828,69,0	1/1:2,25:27:75.23:899,75,0	0/0:24,0:24:69.22:0,69,950	0/0:18,0:18:51.11:0,51,660	0/0:17,0:17:51.17:0,51,713	0/0:15,0:15:45.15:0,45,624	0/0:17,0:17:44.74:0,45,597	0/0:31,0:31:90.30:0,90,1251	0/0:28,0:28:75.17:0,75,977	1/1:0,14:14:42.13:504,42,0	1/1:2,27:29:66.20:792,66,0	1/1:0,12:12:36.11:432,36,0	0/0:20,0:20:60.19:0,60,824	0/0:32,0:32:96.31:0,96,1326	0/0:39,0:38:99:0,108,1507	0/0:10,0:10:24.08:0,24,336
chr10	44460918	.	GA	G	3032.72	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=14.671;DP=622;FS=0.395;HRun=6;HaplotypeScore=67.6026;InbreedingCoeff=0.9997;MQ=90.08;MQ0=0;MQRankSum=-1.008;QD=25.70;ReadPosRankSum=2.759;VQSLOD=3.7844;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:69.18:0,69,874	0/0:9,0:9:27.09:0,27,355	0/0:28,0:28:63.19:0,63,784	0/0:19,0:19:37.76:0,38,509	0/0:26,0:26:75.24:0,75,974	0/0:31,0:31:90.27:0,90,1156	0/0:15,0:15:42.12:0,42,526	0/0:27,0:27:72.21:0,72,899	0/0:15,0:15:42.14:0,42,553	0/0:34,0:34:93.30:0,93,1224	0/0:22,1:23:36.97:0,37,823	1/1:4,18:22:48.12:515,48,0	1/1:0,16:16:45.11:483,45,0	1/1:2,19:21:54.14:580,54,0	0/0:14,0:14:36.12:0,36,473	0/0:22,0:22:66.21:0,66,869	0/0:27,0:27:81.26:0,81,1066	0/0:21,0:21:63.16:0,63,807	0/0:31,0:31:90.27:0,90,1145	0/0:29,0:29:72.19:0,72,893	0/0:19,0:19:57.17:0,57,732	1/1:2,21:24:63.16:676,63,0	1/1:1,19:20:51.13:548,51,0	1/1:1,14:15:39.10:419,39,0	0/0:26,0:26:69.22:0,69,895	0/0:24,0:24:63.18:0,63,800	0/0:26,0:26:75.24:0,75,987	0/0:15,0:15:45.15:0,45,592
chr10	44462258	.	TTCTC	T	3116.74	PASS	AB=0.846;AC=15;AF=0.268;AN=56;BaseQRankSum=0.469;DP=688;FS=21.435;HRun=0;HaplotypeScore=137.4032;InbreedingCoeff=0.6862;MQ=68.08;MQ0=11;MQRankSum=2.490;QD=15.43;ReadPosRankSum=2.968;VQSLOD=1.6940;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:21:15.05:0,15,286	0/0:10,0:10:5.98:0,6,86	0/0:25,0:20:3.01:0,3,65	0/0:25,0:16:5.05:0,5,61	0/0:23,0:30:33.41:0,33,403	0/0:13,0:27:24.08:0,24,429	0/0:12,0:17:15.03:0,15,254	0/0:48,0:47:36.07:0,36,713	0/1:11,2:21:59.77:60,0,132	1/1:16,14:29:48.15:746,48,0	1/1:17,8:26:32.84:472,33,0	0/0:28,0:30:8.32:0,8,973	0/0:19,0:20:47.90:0,48,1039	0/1:20,1:21:20.91:21,0,484	1/1:11,17:28:45.15:720,45,0	1/1:2,11:15:20.38:450,20,0	0/0:20,0:25:23.90:0,24,390	1/1:10,15:23:29.38:479,29,0	0/0:24,0:26:40.94:0,41,689	0/0:22,0:23:21.04:0,21,319	0/0:22,0:24:30.10:0,30,481	0/0:15,0:14:20.81:0,21,433	0/1:20,1:22:0.13:0,0,923	0/0:31,1:33:27.24:0,27,1666	1/1:7,6:12:24.07:355,24,0	0/0:22,0:34:79.13:0,79,1484	0/0:15,0:20:33.07:0,33,540	0/0:18,0:19:19.78:0,20,350
chr10	44463464	.	GTGCA	G	1713.85	PASS	AB=1.000;AC=22;AF=0.393;AN=56;BaseQRankSum=10.254;DP=511;FS=2.815;HRun=0;HaplotypeScore=154.2221;InbreedingCoeff=0.3764;MQ=64.25;MQ0=4;MQRankSum=-6.474;QD=5.77;ReadPosRankSum=0.404;VQSLOD=2.8412;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:0.23:0,0,633	0/0:8,0:8:12.04:0,12,304	0/1:21,0:15:37.37:37,0,128	0/1:24,0:13:1.85:2,0,251	0/1:17,0:17:2.72:3,0,313	0/0:24,0:24:63.21:0,63,1506	0/0:19,0:19:51.18:0,51,1269	1/1:10,12:22:14.46:401,14,0	0/0:17,0:17:48.12:0,48,978	0/1:17,0:17:20.47:20,0,171	0/0:9,0:9:6.01:0,6,142	1/1:32,0:32:51.03:475,51,0	1/1:16,0:16:13.33:167,13,0	1/1:19,0:19:34.97:361,35,0	0/0:23,0:23:3.32:0,3,408	0/1:5,0:5:0.80:1,0,49	0/1:39,0:39:72.48:72,0,1400	0/0:16,0:16:19.50:0,19,305	0/0:16,0:16:38.80:0,39,604	0/1:13,0:13:1.07:1,0,288	0/0:27,0:27:37.03:0,37,578	1/1:16,0:16:20.99:183,21,0	1/1:9,0:10:17.21:137,17,0	1/1:26,0:26:0.83:22,1,0	0/1:19,0:19:8.37:8,0,204	0/0:12,0:12:26.38:0,26,352	0/0:15,0:15:28.11:0,28,338	0/0:1,0:1:3.01:0,3,39
chr10	44463465	.	TGCATGC	T	2820.07	PASS	AB=0.987;AC=17;AF=0.304;AN=56;BaseQRankSum=9.891;DP=505;FS=0.957;HRun=0;HaplotypeScore=164.7768;InbreedingCoeff=0.5202;MQ=63.98;MQ0=4;MQRankSum=-7.223;QD=11.95;ReadPosRankSum=0.698;VQSLOD=3.0064;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:2.59:0,3,987	0/0:7,1:8:12.04:0,12,399	0/1:20,0:14:82.16:82,0,128	0/1:22,0:12:25.73:26,0,259	0/0:15,0:15:4.68:0,5,498	0/0:24,0:24:63.22:0,63,1961	0/0:17,0:17:51.18:0,51,1631	0/1:21,0:21:4.81:191,0,5	0/0:18,0:18:48.12:0,48,1245	0/0:16,0:16:16.38:0,16,419	0/0:9,0:9:24.38:0,24,320	1/1:26,6:31:51.17:883,51,0	1/1:14,1:15:13.36:329,13,0	1/1:18,1:19:35.06:642,35,0	0/0:23,0:23:23.97:0,24,777	0/0:5,0:5:11.90:0,12,138	0/1:40,1:41:99:178,0,1834	0/0:16,0:16:21.91:0,22,510	0/0:16,0:16:38.80:0,39,885	0/1:13,0:13:1.22:1,0,442	0/0:28,0:28:37.06:0,37,863	1/1:16,0:16:21.07:353,21,0	1/1:9,1:10:17.27:251,17,0	1/1:24,2:26:4.89:66,5,0	0/0:19,0:19:11.45:0,11,463	0/0:11,0:11:30.40:0,30,572	0/0:15,0:15:29.35:0,29,513	0/0:1,0:1:3.01:0,3,58
chr10	44463467	.	CAT	C	1347.04	PASS	AB=0.935;AC=25;AF=0.446;AN=56;BaseQRankSum=9.588;DP=497;FS=2.520;HRun=0;HaplotypeScore=138.1551;InbreedingCoeff=0.1374;MQ=63.98;MQ0=4;MQRankSum=-6.383;QD=4.33;ReadPosRankSum=2.805;VQSLOD=3.1224;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:28:21.60:22,0,311	0/0:7,0:7:12.04:0,12,221	0/1:17,0:13:37.43:37,0,145	0/0:22,0:11:19.50:0,19,263	0/1:15,0:15:14.91:15,0,163	0/0:25,0:25:66.19:0,66,1175	0/0:18,0:18:54.19:0,54,1044	1/1:19,0:19:13.34:157,13,0	0/0:19,0:19:51.13:0,51,849	0/1:14,1:15:19.30:159,0,19	0/1:9,1:10:41.96:82,0,42	1/1:32,0:31:46.92:222,47,0	1/1:15,0:15:10.66:65,11,0	1/1:18,2:20:32.05:167,32,0	0/1:23,1:24:99:129,0,150	0/1:3,2:5:12.11:90,0,12	0/0:40,0:40:3.29:0,3,1068	0/1:15,2:17:77.14:77,0,127	0/0:14,0:14:38.66:0,39,345	0/1:12,0:12:3.52:4,0,130	0/0:26,0:26:33.21:0,33,284	1/1:14,0:14:18.70:80,19,0	1/1:10,0:10:15.37:60,15,0	1/1:25,0:25:0.38:7,0,0	0/1:20,0:20:91.45:131,0,91	0/1:10,1:11:27.85:28,0,129	0/0:14,0:14:27.22:0,27,185	0/0:1,0:1:2.96:0,3,19
chr10	44463472	.	GCGCGCGCACACACACA	G	7028.27	PASS	AB=0.988;AC=16;AF=0.286;AN=56;BaseQRankSum=10.217;DP=513;FS=0.000;HRun=0;HaplotypeScore=227.0486;InbreedingCoeff=0.6342;MQ=59.80;MQ0=4;MQRankSum=-8.233;QD=33.63;ReadPosRankSum=3.924;VQSLOD=3.7113;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:45.13:0,45,1497	0/0:12,0:12:18.06:0,18,743	0/1:15,0:9:4.02:93,0,4	0/1:18,0:9:34.52:71,0,35	0/0:18,0:17:30.07:0,30,708	0/0:25,0:25:69.22:0,69,3691	0/0:20,0:20:60.21:0,60,3063	0/1:17,0:17:99:195,0,315	0/0:21,0:21:41.18:0,41,1809	0/0:14,0:14:41.94:0,42,1497	0/0:12,0:12:33.04:0,33,1607	1/1:10,20:31:51.18:2263,51,0	1/1:3,11:14:21.07:985,21,0	1/1:3,16:20:36.08:1572,36,0	0/0:21,0:21:54.57:0,55,2875	0/0:7,0:7:15.04:0,15,760	0/1:44,0:44:49.56:50,0,4158	0/0:14,0:14:38.54:0,39,2076	0/0:14,0:14:42.14:0,42,1396	0/0:10,0:10:20.57:0,21,705	0/0:25,0:25:39.07:0,39,1569	1/1:0,13:14:21.07:982,21,0	1/1:4,4:9:15.05:655,15,0	1/1:4,20:24:5.83:163,6,0	0/0:22,0:22:51.17:0,51,2904	0/0:16,0:16:45.15:0,45,2052	0/0:17,0:17:39.50:0,40,1127	0/0:3,0:3:6.02:0,6,171
chr10	44463478	.	G	GCACACACACA	2838.25	PASS	AB=0.981;AC=17;AF=0.340;AN=50;BaseQRankSum=-1.661;DP=548;FS=3.868;HRun=0;HaplotypeScore=236.9235;InbreedingCoeff=0.4118;MQ=54.73;MQ0=6;MQRankSum=-2.928;QD=12.13;ReadPosRankSum=-6.012;VQSLOD=1.1852;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:40,0:40:14.97:159,15,0	0/0:10,0:14:4.02:0,4,114	./.	./.	./.	0/0:22,0:26:33.10:0,33,874	0/0:19,0:18:21.07:0,21,536	0/1:20,0:20:18.11:18,0,165	0/0:16,0:17:12:0,12,268	0/1:15,0:15:38.98:39,0,78	0/0:14,0:14:21.06:0,21,479	0/0:30,0:30:47.57:0,48,924	0/0:14,0:14:21.07:0,21,454	0/0:21,0:20:33.11:0,33,745	0/0:21,0:21:36.02:0,36,766	0/1:9,0:9:57.02:57,0,210	0/1:40,0:42:99:108,0,989	0/0:13,0:13:30.10:0,30,738	1/1:17,0:17:14.33:396,14,0	1/1:17,0:17:2.99:24,3,0	1/1:26,0:26:10.57:150,11,0	0/0:14,0:14:21.04:0,21,437	0/0:7,0:7:12.04:0,12,242	0/0:23,0:23:2.61:0,3,67	0/0:24,0:24:25.15:0,25,533	0/1:17,1:19:39.60:1129,0,40	1/1:25,0:25:30.09:866,30,0	1/1:3,0:3:3.01:63,3,0
chr10	44463592	.	TAAATAC	T	1037.70	PASS	AB=0.711;AC=2;AF=0.036;AN=56;BaseQRankSum=6.797;DP=715;FS=9.653;HRun=0;HaplotypeScore=149.3461;InbreedingCoeff=-0.0392;MQ=78.69;MQ0=0;MQRankSum=-7.182;QD=15.49;ReadPosRankSum=-0.867;VQSLOD=2.5871;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:93.32:0,93,3227	0/1:10,12:22:99:562,0,814	0/0:22,0:22:59.83:0,60,1724	0/0:30,0:30:89.53:0,90,2758	0/0:26,0:26:75.26:0,75,2701	0/0:24,0:24:69.19:0,69,2237	0/0:39,0:39:99:0,114,3989	0/0:33,0:33:93.32:0,93,3241	0/0:19,0:18:51.18:0,51,1771	0/0:24,0:24:72.25:0,72,2476	0/0:16,0:16:45.15:0,45,1617	0/0:30,0:29:87.30:0,87,3087	0/0:38,0:38:99:0,108,3879	0/0:20,0:20:60.21:0,60,2032	0/0:26,0:26:78.27:0,78,2810	0/0:12,0:12:36.12:0,36,1251	0/1:32,13:45:99:565,0,2856	0/0:21,0:21:57.17:0,57,1918	0/0:28,0:28:75.24:0,75,2373	0/0:15,0:15:39.13:0,39,1399	0/0:32,0:32:84.29:0,84,3028	0/0:30,0:30:90.31:0,90,3175	0/0:24,0:24:69.24:0,69,2462	0/0:30,0:30:87.27:0,87,2858	0/0:23,0:23:69.24:0,69,2466	0/0:25,0:25:75.26:0,75,2662	0/0:22,0:22:66.23:0,66,2353	0/0:3,0:3:9.03:0,9,258
chr10	44464428	.	GC	G	164.43	PASS	AB=0.765;AC=2;AF=0.036;AN=56;BaseQRankSum=5.886;DP=620;FS=0.000;HRun=1;HaplotypeScore=60.1320;InbreedingCoeff=-0.0409;MQ=65.80;MQ0=0;MQRankSum=-5.813;QD=3.05;ReadPosRankSum=1.864;VQSLOD=-0.2877;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,126,2009	0/1:10,5:15:99:123,0,391	0/0:16,0:16:45.15:0,45,704	0/0:13,0:13:33:0,33,496	0/0:13,0:13:39.10:0,39,576	0/0:20,0:20:57.19:0,57,911	0/0:21,0:21:63.21:0,63,1005	0/0:44,0:44:99:0,129,2019	0/0:20,0:20:60.20:0,60,959	0/0:16,0:16:42.14:0,42,671	0/0:14,0:14:42.14:0,42,671	0/0:32,0:32:96.31:0,96,1511	0/0:22,0:22:66.23:0,66,1055	0/0:25,0:25:75.26:0,75,1194	0/0:27,0:27:81.28:0,81,1295	0/0:14,0:14:42.14:0,42,671	0/1:28,11:39:99:131,0,1102	0/0:21,0:21:63.19:0,63,982	0/0:12,0:12:36.11:0,36,554	0/0:19,0:19:57.16:0,57,860	0/0:44,0:44:99:0,132,2063	0/0:20,0:20:57.19:0,57,911	0/0:19,0:19:57.18:0,57,886	0/0:20,0:20:60.20:0,60,959	0/0:24,0:24:72.19:0,72,1079	0/0:25,0:25:75.25:0,75,1176	0/0:21,0:21:63.21:0,63,1005	0/0:2,0:2:6.02:0,6,96
chr10	44465206	.	C	CTA	1300.44	PASS	AB=0.695;AC=2;AF=0.036;AN=56;BaseQRankSum=-0.840;DP=829;FS=0.000;HRun=0;HaplotypeScore=99.1576;InbreedingCoeff=-0.0370;MQ=70.57;MQ0=0;MQRankSum=-3.237;QD=17.34;ReadPosRankSum=0.432;VQSLOD=3.0460;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,138,1992	0/1:7,12:19:99:637,0,133	0/0:25,0:25:72.22:0,72,1032	0/0:32,0:32:90.19:0,90,1251	0/0:28,0:28:78.26:0,78,1190	0/0:33,0:33:99:0,99,1470	0/0:31,0:31:93.29:0,93,1372	0/0:36,0:36:99:0,105,1607	0/0:21,0:21:60.18:0,60,895	0/0:23,0:23:66.17:0,66,966	0/0:20,0:20:57.18:0,57,833	0/0:33,0:33:99:0,99,1473	0/0:28,0:28:81.24:0,81,1194	0/0:33,0:33:99:0,99,1493	0/0:32,0:32:93.27:0,93,1359	0/0:42,0:42:99:0,123,1763	0/1:40,16:55:99:752,0,1456	0/0:15,0:15:45.14:0,45,667	0/0:28,0:28:84.27:0,84,1242	0/0:31,0:31:87.28:0,87,1308	0/0:38,0:38:99:0,108,1587	0/0:24,0:24:69.23:0,69,1036	0/0:14,0:14:42.14:0,42,642	0/0:30,0:30:90.28:0,90,1350	0/0:24,0:24:57.19:0,57,861	0/0:24,0:24:72.24:0,72,1101	0/0:45,0:45:99:0,129,1909	0/0:17,0:17:51.17:0,51,780
chr10	44465265	.	TG	T	705.86	PASS	AB=0.700;AC=2;AF=0.036;AN=56;BaseQRankSum=8.800;DP=743;FS=9.959;HRun=4;HaplotypeScore=83.8682;InbreedingCoeff=-0.0372;MQ=69.28;MQ0=1;MQRankSum=-4.045;QD=8.93;ReadPosRankSum=-0.342;VQSLOD=0.1001;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,141,1939	0/1:9,12:20:99:322,0,240	0/0:36,0:32:48.73:0,49,1033	0/0:30,0:28:72.17:0,72,910	0/0:22,0:22:57.19:0,57,797	0/0:34,0:34:99:0,99,1368	0/0:27,0:27:81.26:0,81,1113	0/0:27,0:27:81.26:0,81,1101	0/0:22,0:22:63.19:0,63,863	0/0:23,0:23:66.17:0,66,887	0/0:20,0:20:57.16:0,57,762	0/0:22,0:22:63.20:0,63,863	0/0:23,0:23:66.22:0,66,923	0/0:27,0:27:81.26:0,81,1119	0/0:29,0:29:87.29:0,87,1217	0/0:33,0:33:99:0,99,1386	0/1:40,18:58:99:472,0,1309	0/0:12,0:12:36.11:0,36,487	0/0:22,0:22:66.22:0,66,923	0/0:25,0:25:69.23:0,69,955	0/0:33,0:33:99:0,99,1385	0/0:19,0:19:51.17:0,51,713	0/0:14,0:14:33.11:0,33,459	0/0:22,0:22:59.96:0,60,788	0/0:28,0:28:63.21:0,63,879	0/0:20,0:20:57.17:0,57,765	0/0:37,0:37:99:0,105,1469	0/0:7,0:7:21.07:0,21,294
chr10	44465439	.	A	AT	387.66	PASS	AB=0.780;AC=2;AF=0.036;AN=56;BaseQRankSum=6.912;DP=673;FS=2.115;HRun=5;HaplotypeScore=73.3130;InbreedingCoeff=-0.0372;MQ=87.78;MQ0=0;MQRankSum=-2.680;QD=5.46;ReadPosRankSum=0.410;VQSLOD=-0.4507;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:78.20:0,78,838	0/1:16,8:24:99:208,0,418	0/0:25,0:25:61.02:0,61,636	0/0:25,0:25:63.07:0,63,654	0/0:31,0:32:81.19:0,81,864	0/0:33,0:33:93.23:0,93,999	0/0:25,0:25:72.16:0,72,765	0/0:23,0:23:57.09:0,57,592	0/0:20,0:20:51.13:0,51,548	0/0:27,0:27:78.19:0,78,832	0/0:21,0:21:54.04:0,54,549	0/0:21,0:21:57.08:0,57,598	0/0:19,0:19:51.11:0,51,540	0/0:17,0:17:45.10:0,45,476	0/0:28,0:28:81.01:0,81,827	0/0:26,0:26:72.11:0,72,759	0/1:36,11:47:99:268,0,896	0/0:12,0:12:36.07:0,36,376	0/0:13,0:13:33.08:0,33,355	0/0:30,0:30:84.21:0,84,902	0/0:26,0:26:75.19:0,75,806	0/0:15,0:15:45.11:0,45,484	0/0:27,0:27:78.20:0,78,838	0/0:31,0:31:84.21:0,84,903	0/0:9,0:9:21.02:0,21,214	0/0:24,0:24:66.16:0,66,709	0/0:32,0:32:84.13:0,84,866	0/0:13,0:12:36.04:0,36,367
chr10	44465525	.	GAA	G	2429.20	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=0.863;DP=390;FS=9.547;HRun=3;HaplotypeScore=55.5705;InbreedingCoeff=0.9404;MQ=70.61;MQ0=24;MQRankSum=0.235;QD=16.75;ReadPosRankSum=0.423;VQSLOD=-0.0079;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:18:30.64:0,31,290	0/0:6,0:6:14.38:0,14,116	0/0:26,0:15:9.29:0,9,148	0/0:31,0:11:15.26:0,15,194	0/0:19,0:19:47.65:0,48,392	0/0:14,0:13:27.39:0,27,210	0/0:16,0:16:29.32:0,29,283	1/1:15,0:13:26.93:225,27,0	0/0:14,0:13:35.77:0,36,287	1/1:5,4:9:23.91:196,24,0	1/1:10,0:10:20.92:167,21,0	1/1:8,0:8:14.98:125,15,0	1/1:13,0:13:32.77:252,33,0	1/1:7,0:6:11.99:100,12,0	1/1:12,0:12:32.90:265,33,0	1/1:16,0:16:44.71:341,45,0	0/0:24,0:20:3.35:0,3,272	1/1:8,0:8:23.77:167,24,0	0/0:11,0:11:29.54:0,30,231	0/0:19,0:19:48.62:0,49,404	0/0:8,0:7:14.92:0,15,113	1/1:16,0:16:35.70:299,36,0	1/1:15,0:14:32.95:270,33,0	1/1:6,0:5:8.94:68,9,0	1/1:10,0:8:20.98:178,21,0	0/0:13,0:12:32.84:0,33,282	0/0:13,0:13:26.92:0,27,239	0/0:10,0:8:10.94:0,11,120
chr10	44465614	.	AGAGGAAGAGGAAGAGGAAGAGGAAGAGGAAGAG	A	786.57	PASS	AB=0.916;AC=9;AF=0.161;AN=56;BaseQRankSum=0.741;DP=511;FS=0.670;HRun=0;HaplotypeScore=332.0458;InbreedingCoeff=-0.1931;MQ=45.62;MQ0=26;MQRankSum=-6.644;QD=5.78;ReadPosRankSum=-4.805;VQSLOD=1.0855;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:24:66.23:0,66,7335	0/0:2,0:1:3.01:0,3,254	0/0:32,0:16:48.16:0,48,1235	0/0:30,0:15:42.14:0,42,975	0/0:24,0:24:63.69:0,64,6011	0/0:22,0:21:63.22:0,63,6994	0/0:17,0:16:45.15:0,45,2833	0/1:34,0:28:99:344,0,1873	0/0:21,0:19:48.16:0,48,4997	0/0:27,0:26:60.91:0,61,5114	0/0:14,0:14:29.25:0,29,2372	0/1:10,0:10:61.38:152,0,61	0/1:7,0:7:99:183,0,282	0/1:5,0:4:56.24:56,0,62	0/0:14,0:11:8.68:0,9,1306	0/1:16,0:16:15.33:15,0,1725	0/0:29,0:24:59.82:0,60,3990	0/1:7,0:5:37.87:38,0,791	0/0:10,0:9:27.09:0,27,2746	0/0:20,0:20:53.76:0,54,5499	0/0:12,0:11:29.77:0,30,2359	0/1:12,13:25:98.10:98,0,405	0/1:8,14:20:2.58:3,0,26	0/1:9,0:9:32.71:33,0,82	0/0:19,0:19:23.72:0,24,2184	0/0:20,0:20:54.37:0,54,5914	0/0:22,0:22:63.22:0,63,6826	0/0:10,0:9:26.98:0,27,3184
chr10	44465626	.	AGAG	A	422.82	PASS	AB=0.939;AC=7;AF=0.125;AN=56;BaseQRankSum=6.586;DP=513;FS=5.344;HRun=0;HaplotypeScore=103.2882;InbreedingCoeff=0.3614;MQ=47.64;MQ0=19;MQRankSum=-6.442;QD=7.98;ReadPosRankSum=-2.184;VQSLOD=2.0943;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:29:84.29:0,84,1681	0/0:3,0:2:6.02:0,6,111	0/0:22,0:12:6.09:0,6,303	0/0:18,1:11:26.91:0,27,275	0/0:26,0:26:72.21:0,72,1490	0/0:22,0:21:63.22:0,63,1388	0/0:17,0:17:44.64:0,45,855	0/0:33,0:25:2.98:0,3,713	0/0:21,0:20:57.18:0,57,1216	0/0:29,0:28:66:0,66,1292	0/0:15,0:15:33.06:0,33,660	0/1:8,0:8:28.31:77,0,28	0/1:7,2:9:46.08:208,0,46	0/1:5,0:4:35.21:35,0,38	0/0:14,0:11:18.06:0,18,360	0/0:15,0:15:30.07:0,30,572	0/0:25,0:24:40.83:0,41,1017	0/0:6,0:5:0.93:0,1,191	0/0:11,0:10:30.10:0,30,601	0/0:23,0:23:65.97:0,66,1297	0/0:18,0:17:44.87:0,45,752	0/0:27,0:27:14.58:0,15,273	1/1:20,1:20:8.86:126,9,0	1/1:9,1:10:11.96:109,12,0	0/0:21,0:20:36.12:0,36,719	0/0:21,0:21:60.20:0,60,1226	0/0:26,0:26:76.46:0,76,1496	0/0:13,0:12:36.09:0,36,741
chr10	44465632	.	AGAG	A	495.97	PASS	AB=0.909;AC=8;AF=0.143;AN=56;BaseQRankSum=6.124;DP=511;FS=10.229;HRun=0;HaplotypeScore=103.5227;InbreedingCoeff=0.4059;MQ=48.04;MQ0=19;MQRankSum=-5.163;QD=7.40;ReadPosRankSum=-1.294;VQSLOD=1.8328;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:30:87.28:0,87,1710	0/0:6,0:5:15.05:0,15,240	0/0:16,0:7:18:0,18,201	0/0:19,0:8:8.15:0,8,101	0/0:25,0:25:69.19:0,69,1442	0/0:24,0:23:69.22:0,69,1455	0/0:16,0:16:42.13:0,42,824	0/0:35,0:26:19.70:0,20,916	0/0:21,0:20:60.20:0,60,1270	0/0:28,0:27:72:0,72,1329	0/0:15,0:14:30.10:0,30,587	0/1:3,4:7:17.97:95,0,18	0/1:11,0:11:41.28:221,0,41	0/1:8,0:7:29.35:52,0,29	0/0:13,0:11:18.06:0,18,361	0/0:12,0:12:27.09:0,27,551	0/0:24,0:23:44.88:0,45,1053	0/1:8,0:7:1.01:1,0,198	0/0:13,0:12:32.98:0,33,589	0/0:23,0:23:66.21:0,66,1297	0/0:16,0:15:43.37:0,43,744	0/0:27,0:27:14.52:0,15,272	1/1:20,0:19:8.74:126,9,0	1/1:4,9:13:14.96:136,15,0	0/0:21,0:20:36.12:0,36,701	0/0:21,0:21:63.22:0,63,1290	0/0:24,0:24:72.25:0,72,1497	0/0:13,0:12:36.12:0,36,766
chr10	44465650	.	A	AGAG	2643	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=12.389;DP=576;FS=21.545;HRun=0;HaplotypeScore=109.2761;InbreedingCoeff=0.4282;MQ=58.01;MQ0=22;MQRankSum=-7.891;QD=11.80;ReadPosRankSum=1.519;VQSLOD=1.8586;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:37:99:0,101,1507	0/0:8,0:7:21.07:0,21,338	0/0:29,0:15:33.89:0,34,578	0/0:33,0:16:19.39:0,19,356	0/0:23,0:23:45.42:0,45,934	0/0:27,0:26:78.19:0,78,1165	0/0:17,0:17:9:0,9,649	0/1:26,0:20:50.15:408,0,50	0/0:24,0:23:42.59:0,43,922	1/1:18,12:28:74.44:881,74,0	1/1:11,3:12:29.76:266,30,0	0/1:8,0:8:41.75:58,0,42	0/1:12,0:12:18.68:129,0,19	0/1:11,0:11:20.89:21,0,88	1/1:6,7:11:14.83:183,15,0	1/1:20,0:17:29.45:275,29,0	0/1:22,0:21:29:29,0,645	1/1:8,0:7:13.22:129,13,0	0/0:15,0:14:39.21:0,39,530	0/0:22,0:22:60.15:0,60,887	0/0:23,0:22:59.34:0,59,890	0/0:28,0:28:41.91:0,42,421	0/1:21,0:20:52.72:74,0,53	0/1:17,0:17:30.05:98,0,30	1/1:12,6:20:29.66:289,30,0	0/0:24,0:23:69.22:0,69,1103	0/0:26,0:26:78.21:0,78,1213	0/0:14,0:13:39.08:0,39,629
chr10	44465656	.	A	AGAG	2806.15	PASS	AB=1.000;AC=18;AF=0.321;AN=56;BaseQRankSum=12.713;DP=609;FS=26.242;HRun=0;HaplotypeScore=115.9832;InbreedingCoeff=0.5102;MQ=63.19;MQ0=19;MQRankSum=-5.144;QD=13.36;ReadPosRankSum=0.615;VQSLOD=1.2064;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:42:99:0,120,1694	0/0:9,0:8:24.07:0,24,384	0/0:40,0:22:52.62:0,53,780	0/0:40,0:22:26.05:0,26,431	0/0:22,0:22:63.19:0,63,983	0/0:27,0:26:78.14:0,78,1162	0/0:17,0:17:50.60:0,51,697	1/1:25,0:21:12.33:520,12,0	0/0:23,0:22:39.62:0,40,911	1/1:31,0:29:58.53:899,59,0	0/1:16,0:14:9.91:189,0,10	0/1:8,0:8:41.51:57,0,42	0/1:13,0:13:43.06:129,0,43	0/1:11,0:11:13.53:14,0,129	1/1:15,0:12:23.82:258,24,0	1/1:13,9:19:29.48:310,29,0	0/0:23,0:22:51.90:0,52,811	1/1:7,0:7:13.53:130,14,0	0/0:13,0:13:38.89:0,39,540	0/0:21,0:21:63.15:0,63,918	0/0:25,0:24:66.06:0,66,947	0/0:26,0:26:44.64:0,45,430	0/1:21,0:20:53.89:74,0,54	0/1:18,0:18:68:92,0,68	1/1:23,0:21:35.49:330,35,0	0/0:26,0:25:75.22:0,75,1160	0/0:27,0:27:78.21:0,78,1215	0/0:15,0:15:39.10:0,39,633
chr10	44465752	.	CA	C	246.23	PASS	AB=0.586;AC=1;AF=0.018;AN=56;BaseQRankSum=5.932;DP=627;FS=6.078;HRun=5;HaplotypeScore=76.3250;InbreedingCoeff=-0.0183;MQ=71.24;MQ0=0;MQRankSum=-5.661;QD=14.48;ReadPosRankSum=1.280;VQSLOD=2.8244;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,114,1539	0/1:5,12:17:99:321,0,119	0/0:12,0:12:33.11:0,33,434	0/0:10,0:10:29.58:0,30,314	0/0:26,0:26:78.26:0,78,1065	0/0:27,0:27:75.21:0,75,977	0/0:22,0:22:60.16:0,60,798	0/0:25,0:25:66.20:0,66,875	0/0:33,0:33:96.26:0,96,1258	0/0:26,0:26:72.18:0,72,938	0/0:23,0:23:66.22:0,66,902	0/0:27,0:27:81.24:0,81,1062	0/0:16,0:16:48.15:0,48,634	0/0:9,0:9:24.05:0,24,308	0/0:24,0:24:69.23:0,69,940	0/0:20,0:20:54.15:0,54,704	0/0:29,1:30:50.84:0,51,1074	0/0:13,0:13:39.13:0,39,533	0/0:17,0:17:42.11:0,42,555	0/0:23,0:23:63.19:0,63,833	0/0:36,0:37:96.17:0,96,1270	0/0:19,0:19:57.19:0,57,776	0/0:17,0:17:48.16:0,48,656	0/0:36,0:36:96.32:0,96,1312	0/0:17,0:17:48.16:0,48,656	0/0:23,0:23:63.21:0,63,862	0/0:27,0:27:78.22:0,78,1016	0/0:10,0:10:30.08:0,30,393
chr10	44465765	.	AG	A	193.78	PASS	AB=0.581;AC=1;AF=0.018;AN=56;BaseQRankSum=6.174;DP=639;FS=7.596;HRun=2;HaplotypeScore=75.3770;InbreedingCoeff=-0.0183;MQ=74.24;MQ0=0;MQRankSum=-5.898;QD=10.77;ReadPosRankSum=1.542;VQSLOD=1.4779;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,132,1942	0/1:5,13:18:99:268,0,154	0/0:17,0:17:51.17:0,51,729	0/0:15,0:15:45.15:0,45,674	0/0:22,0:22:66.20:0,66,946	0/0:27,0:27:78.26:0,78,1168	0/0:23,0:23:69.23:0,69,1034	0/0:25,0:25:72.24:0,72,1051	0/0:36,0:36:99:0,105,1554	0/0:24,0:24:72.24:0,72,1079	0/0:23,0:23:66.22:0,66,972	0/0:27,0:27:81.27:0,81,1198	0/0:17,0:17:51.12:0,51,738	0/0:10,0:10:27.06:0,27,364	0/0:25,0:25:72.24:0,72,1075	0/0:20,0:20:60.20:0,60,895	0/0:31,0:31:66.50:0,67,1280	0/0:13,0:13:39.13:0,39,584	0/0:17,0:17:51.17:0,51,765	0/0:22,0:22:66.20:0,66,949	0/0:34,0:34:96.30:0,96,1413	0/0:16,0:16:48.16:0,48,719	0/0:22,0:22:60.18:0,60,859	0/0:34,0:34:96.29:0,96,1406	0/0:18,0:18:54.18:0,54,805	0/0:26,0:26:75.24:0,75,1093	0/0:25,0:25:72.23:0,72,1060	0/0:8,0:8:24.08:0,24,350
chr10	44465771	.	A	AT	255.32	PASS	AB=0.600;AC=1;AF=0.018;AN=56;BaseQRankSum=5.936;DP=635;FS=4.156;HRun=0;HaplotypeScore=73.6582;InbreedingCoeff=-0.0186;MQ=77.85;MQ0=0;MQRankSum=-5.532;QD=14.18;ReadPosRankSum=1.724;VQSLOD=4.9880;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,120,1675	0/1:6,12:18:99:330,0,200	0/0:23,0:23:63.03:0,63,836	0/0:18,0:18:51.16:0,51,680	0/0:19,0:19:57.19:0,57,796	0/0:28,0:28:81.27:0,81,1131	0/0:22,0:22:66.21:0,66,906	0/0:25,0:25:72.22:0,72,973	0/0:37,0:37:99:0,108,1501	0/0:25,0:25:72.23:0,72,976	0/0:20,0:20:60.19:0,60,821	0/0:26,0:26:75.25:0,75,1046	0/0:18,0:18:51.13:0,51,675	0/0:7,0:7:21.07:0,21,293	0/0:24,0:24:69.23:0,69,964	0/0:22,0:22:66.22:0,66,922	0/0:30,1:31:55.93:0,56,1164	0/0:13,0:13:39.11:0,39,527	0/0:18,0:18:54.17:0,54,739	0/0:20,0:20:60.20:0,60,832	0/0:33,0:33:96.30:0,96,1323	0/0:16,0:16:48.16:0,48,671	0/0:21,0:21:60.02:0,60,806	0/0:32,0:32:87.29:0,87,1216	0/0:19,0:19:57.17:0,57,761	0/0:24,0:24:72.21:0,72,960	0/0:28,0:28:81.27:0,81,1129	0/0:6,0:6:18.06:0,18,252
chr10	44465871	.	TC	T	52.03	PASS	AB=0.667;AC=1;AF=0.018;AN=56;BaseQRankSum=3.381;DP=641;FS=3.486;HRun=5;HaplotypeScore=66.3213;InbreedingCoeff=-0.0182;MQ=89.92;MQ0=0;MQRankSum=-2.919;QD=5.20;ReadPosRankSum=-0.757;VQSLOD=-0.6285;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:87.28:0,87,1171	0/1:5,5:10:99:127,0,175	0/0:31,0:31:77.77:0,78,965	0/0:22,0:22:54.08:0,54,632	0/0:29,0:29:78.25:0,78,1049	0/0:32,0:32:93.30:0,93,1256	0/0:25,0:25:69.23:0,69,943	0/0:23,0:23:63.21:0,63,861	0/0:24,0:24:72.22:0,72,953	0/0:33,0:33:96.31:0,96,1298	0/0:19,0:19:54.17:0,54,722	0/0:23,0:23:69.22:0,69,925	0/0:18,0:18:51.09:0,51,659	0/0:18,0:18:48.08:0,48,619	0/0:21,0:21:60.18:0,60,802	0/0:33,0:33:99:0,99,1324	0/0:26,0:26:72.24:0,72,985	0/0:12,0:12:33.08:0,33,426	0/0:14,0:14:42.13:0,42,559	0/0:23,0:23:63.18:0,63,829	0/0:21,0:21:36.89:0,37,770	0/0:22,0:22:60.14:0,60,790	0/0:19,0:19:54.07:0,54,691	0/0:19,0:19:51.15:0,51,680	0/0:17,0:17:51.16:0,51,667	0/0:25,0:25:75.23:0,75,984	0/0:42,0:42:99:0,114,1484	0/0:10,0:10:30.10:0,30,410
chr10	44466545	.	GCAGTACAGAGC	G	632.95	PASS	AB=0.749;AC=2;AF=0.036;AN=56;BaseQRankSum=4.066;DP=645;FS=8.274;HRun=0;HaplotypeScore=207.7157;InbreedingCoeff=-0.0370;MQ=81.32;MQ0=0;MQRankSum=-4.792;QD=17.11;ReadPosRankSum=-0.342;VQSLOD=1.0971;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:23:63.19:0,63,3327	0/1:7,4:11:99:187,0,965	0/0:21,0:21:52.96:0,53,2203	0/0:24,0:24:67:0,67,2959	0/0:28,0:28:84.27:0,84,4358	0/0:26,0:26:78.27:0,78,4345	0/0:19,0:19:54.17:0,54,2803	0/0:29,0:29:84.28:0,84,4272	0/0:19,0:19:57.20:0,57,3285	0/0:22,0:22:63.21:0,63,3090	0/0:33,0:33:96.32:0,96,4804	0/0:29,0:29:78.07:0,78,4283	0/0:19,0:19:51.18:0,51,2903	0/0:37,0:37:99:0,102,5504	0/0:36,0:36:99:0,99,5280	0/0:16,0:16:48.15:0,48,2531	0/1:18,8:26:99:535,0,2042	0/0:14,0:14:42.14:0,42,2158	0/0:22,0:22:66.23:0,66,3339	0/0:18,0:18:51.18:0,51,2942	0/0:23,0:23:69.24:0,69,3677	0/0:26,0:26:72.25:0,72,3870	0/0:21,0:21:60.18:0,60,3296	0/0:18,0:18:45.63:0,46,2545	0/0:17,0:17:45.15:0,45,2409	0/0:28,0:28:84.29:0,84,4478	0/0:27,0:27:81.28:0,81,4246	0/0:12,0:12:33.11:0,33,1577
chr10	44466595	.	TA	T	6168.45	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=10.291;DP=658;FS=5.393;HRun=10;HaplotypeScore=74.0130;InbreedingCoeff=0.9981;MQ=71.50;MQ0=6;MQRankSum=0.511;QD=20.70;ReadPosRankSum=3.285;VQSLOD=5.8973;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:57.14:0,57,622	0/0:11,0:17:41.28:0,41,340	0/0:26,0:15:26.27:0,26,207	0/0:30,0:22:31.69:0,32,305	0/0:31,1:32:64.16:0,64,908	0/0:26,0:26:50.21:0,50,621	0/0:16,0:16:45.06:0,45,482	1/1:6,17:23:50.89:426,51,0	0/0:22,0:22:48.11:0,48,522	1/1:1,23:24:68.79:578,69,0	1/1:3,24:27:71.89:615,72,0	1/1:4,25:29:62.96:547,63,0	1/1:1,20:21:50.99:443,51,0	1/1:4,22:26:59.99:521,60,0	1/1:3,29:32:71.97:625,72,0	1/1:2,18:20:53.99:469,54,0	0/0:23,0:40:87.98:0,88,709	1/1:1,7:8:21:182,21,0	0/0:21,0:21:60.16:0,60,657	0/0:29,0:28:72.18:0,72,787	0/0:9,0:9:18.05:0,18,199	1/1:3,23:26:59.91:514,60,0	1/1:5,19:24:47.84:416,48,0	1/1:0,20:20:53.99:469,54,0	1/1:1,17:18:41.99:365,42,0	0/0:26,0:26:63.15:0,63,676	0/0:31,0:31:90.22:0,90,980	0/0:11,0:11:33.04:0,33,343
chr10	44467086	.	C	CT	297.64	PASS	AB=0.788;AC=2;AF=0.036;AN=56;BaseQRankSum=6.470;DP=758;FS=12.475;HRun=2;HaplotypeScore=83.1857;InbreedingCoeff=-0.0370;MQ=76.25;MQ0=0;MQRankSum=-4.830;QD=5.62;ReadPosRankSum=-0.380;VQSLOD=-0.6800;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:87.27:0,87,1078	0/1:13,4:17:74.18:74,0,435	0/0:19,0:19:43.33:0,43,559	0/0:14,0:14:37.82:0,38,476	0/0:40,0:40:99:0,117,1437	0/0:33,0:33:93.26:0,93,1126	0/0:17,0:17:51.15:0,51,617	0/0:23,0:23:66.21:0,66,818	0/0:22,0:22:63.20:0,63,781	0/0:52,0:52:99:0,144,1785	0/0:31,0:31:84.26:0,84,1041	0/0:25,0:25:72.21:0,72,879	0/0:24,0:24:72.21:0,72,879	0/0:20,0:20:54.17:0,54,670	0/0:33,0:33:93.29:0,93,1152	0/0:29,0:29:87.26:0,87,1066	0/1:25,11:36:99:312,0,722	0/0:29,0:29:84.26:0,84,1041	0/0:21,0:21:54.16:0,54,658	0/0:44,0:44:99:0,126,1545	0/0:24,0:24:69.22:0,69,855	0/0:24,0:24:66.21:0,66,817	0/0:16,0:16:48.15:0,48,595	0/0:12,0:12:36.11:0,36,445	0/0:33,0:33:99:0,99,1227	0/0:33,0:33:96.30:0,96,1190	0/0:40,0:38:99:0,117,1450	0/0:17,0:17:51.12:0,51,615
chr10	44467723	.	C	CA	726.43	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=-5.674;DP=550;FS=18.078;HRun=5;HaplotypeScore=89.9888;InbreedingCoeff=0.7394;MQ=72.29;MQ0=0;MQRankSum=0.262;QD=17.72;ReadPosRankSum=-6.158;VQSLOD=0.9063;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:36.02:0,36,289	0/0:18,0:18:36.09:0,36,384	0/0:15,0:14:30.07:0,30,323	0/0:6,0:6:8.74:0,9,92	0/0:28,0:28:77.86:0,78,415	0/0:28,0:28:78.18:0,78,830	0/0:19,0:19:36.09:0,36,387	1/1:6,23:29:69.15:821,69,0	0/0:14,0:14:39.10:0,39,419	0/0:26,0:26:63.57:0,64,311	0/0:19,0:19:54.50:0,55,290	0/0:15,0:15:32.77:0,33,166	0/0:22,0:22:30.86:0,31,246	0/0:24,0:24:62.73:0,63,313	0/0:17,0:17:38.43:0,38,194	0/0:14,0:14:30.80:0,31,155	0/0:23,0:23:51.08:0,51,531	0/0:12,0:12:31.74:0,32,180	0/0:23,0:23:48.23:0,48,236	0/0:33,0:33:83.58:0,84,460	0/1:12,0:12:0.40:0,0,97	0/0:9,0:9:23.30:0,23,147	0/0:18,0:18:41.83:0,42,226	0/0:15,0:15:34.45:0,34,178	0/0:27,0:27:43.84:0,44,314	0/0:26,0:26:59.58:0,60,308	0/0:27,0:27:75.01:0,75,425	0/0:7,0:7:20.18:0,20,106
chr10	44467921	.	A	AT	385.90	PASS	AB=0.779;AC=2;AF=0.036;AN=56;BaseQRankSum=6.832;DP=699;FS=4.796;HRun=0;HaplotypeScore=69.3614;InbreedingCoeff=-0.0371;MQ=76.54;MQ0=0;MQRankSum=-4.962;QD=5.44;ReadPosRankSum=-2.125;VQSLOD=2.6639;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,123,1682	0/1:11,6:17:99:287,0,288	0/0:26,0:27:63.19:0,63,1034	0/0:21,0:20:51.09:0,51,661	0/0:28,0:28:84.22:0,84,1118	0/0:30,0:30:87.26:0,87,1180	0/0:17,0:17:51.17:0,51,708	0/0:29,0:29:84.26:0,84,1129	0/0:18,0:18:51.17:0,51,712	0/0:23,0:23:69.23:0,69,965	0/0:17,0:17:51.17:0,51,712	0/0:31,0:31:87.29:0,87,1216	0/0:21,0:21:63.21:0,63,881	0/0:17,0:17:51.17:0,51,713	0/0:21,0:21:63.21:0,63,881	0/0:19,0:19:57.17:0,57,778	0/1:42,12:54:99:188,0,1375	0/0:32,0:32:96.29:0,96,1313	0/0:25,0:25:75.24:0,75,1033	0/0:24,0:24:69.23:0,69,963	0/0:27,0:27:75.25:0,75,1048	0/0:16,0:16:45.15:0,45,629	0/0:33,0:33:93.31:0,93,1300	0/0:19,0:19:54.18:0,54,755	0/0:24,0:24:72.24:0,72,1007	0/0:27,0:27:81.27:0,81,1133	0/0:31,0:31:90.30:0,90,1257	0/0:10,0:10:30.10:0,30,420
chr10	44468502	.	GGGATCCCCGA	G	1361.81	PASS	AB=0.681;AC=2;AF=0.036;AN=56;BaseQRankSum=6.677;DP=663;FS=13.726;HRun=0;HaplotypeScore=194.1744;InbreedingCoeff=-0.0392;MQ=90.04;MQ0=0;MQRankSum=-6.763;QD=24.32;ReadPosRankSum=1.515;VQSLOD=1.9953;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,111,5304	0/1:4,13:17:99:880,0,448	0/0:25,0:25:66.23:0,66,3036	0/0:27,0:27:76.14:0,76,3347	0/0:21,0:21:63.22:0,63,3251	0/0:24,0:24:72.25:0,72,3781	0/0:24,0:24:72.25:0,72,3674	0/0:42,0:41:99:0,123,5900	0/0:22,0:22:63.22:0,63,3290	0/0:21,0:21:63.21:0,63,2857	0/0:20,0:20:57.20:0,57,2875	0/0:25,0:25:75.24:0,75,3604	0/0:21,0:21:63.22:0,63,3217	0/0:24,0:24:72.25:0,72,3758	0/0:24,0:24:69.23:0,69,3459	0/0:24,0:24:72.25:0,72,3793	0/1:29,10:39:99:571,0,3901	0/0:19,0:19:57.20:0,57,2847	0/0:17,0:17:51.18:0,51,2576	0/0:14,0:14:42.14:0,42,2194	0/0:24,0:24:69.24:0,69,3472	0/0:22,0:22:57.20:0,57,2964	0/0:21,0:21:60.21:0,60,3007	0/0:32,0:32:96.33:0,96,4604	0/0:15,0:15:42.14:0,42,2155	0/0:25,0:25:72.25:0,72,3586	0/0:34,0:34:99:0,102,5387	0/0:3,0:3:9.03:0,9,486
chr10	44468639	.	CT	C	404.47	PASS	AB=0.744;AC=2;AF=0.036;AN=56;BaseQRankSum=8.327;DP=671;FS=22.621;HRun=7;HaplotypeScore=70.9084;InbreedingCoeff=-0.0377;MQ=79.26;MQ0=0;MQRankSum=-5.153;QD=5.39;ReadPosRankSum=-0.478;VQSLOD=-0.2200;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,105,1312	0/1:16,7:23:99:146,0,500	0/0:19,0:19:45.13:0,45,541	0/0:18,0:18:27.82:0,28,335	0/0:22,0:22:63.20:0,63,793	0/0:25,0:25:69.22:0,69,868	0/0:23,0:23:69.21:0,69,855	0/0:23,0:23:57.18:0,57,716	0/0:29,0:29:78.25:0,78,976	0/0:29,0:29:78.25:0,78,979	0/0:23,0:23:63.20:0,63,790	0/0:25,0:25:72.23:0,72,899	0/0:26,0:26:72.22:0,72,887	0/0:21,0:21:60.15:0,60,736	0/0:22,0:22:60.19:0,60,754	0/0:25,0:25:72.21:0,72,880	0/1:32,20:52:99:348,0,954	0/0:22,0:22:66.21:0,66,830	0/0:17,0:17:39.12:0,39,491	0/0:25,0:25:75.23:0,75,929	0/0:21,0:21:60.18:0,60,740	0/0:28,0:28:78.23:0,78,956	0/0:20,0:20:57.18:0,57,716	0/0:22,0:21:60.19:0,60,755	0/0:18,0:18:51.16:0,51,642	0/0:15,0:15:42.13:0,42,528	0/0:35,0:35:99:0,102,1283	0/0:5,0:5:15.05:0,15,189
chr10	44470257	.	CAGGGCAAGAACTTTAGTGAGAACCCA	C	824.57	PASS	AB=0.818;AC=2;AF=0.036;AN=56;BaseQRankSum=3.839;DP=836;FS=11.734;HRun=0;HaplotypeScore=520.3221;InbreedingCoeff=-0.0371;MQ=73.14;MQ0=0;MQRankSum=-3.829;QD=12.69;ReadPosRankSum=1.588;VQSLOD=-0.4725;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,135,13580	0/1:12,2:14:99:385,0,3500	0/0:27,0:27:81.11:0,81,4215	0/0:25,0:24:72.04:0,72,3745	0/0:36,0:36:99:0,108,10203	0/0:29,0:29:87.26:0,87,9239	0/0:26,0:26:75.23:0,75,6728	0/0:38,0:38:99:0,111,7360	0/0:25,0:25:75.25:0,75,8009	0/0:36,0:36:99:0,105,8953	0/0:21,0:21:63.20:0,63,6097	0/0:29,0:29:84.29:0,84,7802	0/0:39,0:39:99:0,117,10738	0/0:34,0:34:99:0,102,9292	0/0:34,0:34:99:0,99,8521	0/0:43,0:43:99:0,126,12861	0/1:35,16:51:99:529,0,8770	0/0:13,0:13:36.07:0,36,2661	0/0:23,0:23:69.19:0,69,4425	0/0:33,0:33:93.27:0,93,8807	0/0:45,0:45:99:0,135,13616	0/0:24,0:24:72.21:0,72,6134	0/0:26,0:26:78.22:0,78,7060	0/0:30,0:30:87.26:0,87,9112	0/0:24,0:24:72.21:0,72,7856	0/0:27,0:27:81.28:0,81,9255	0/0:30,0:30:90.27:0,90,9092	0/0:9,0:9:27.09:0,27,3149
chr10	44470804	.	C	CT	283.73	PASS	AB=0.817;AC=2;AF=0.036;AN=56;BaseQRankSum=5.503;DP=606;FS=2.480;HRun=3;HaplotypeScore=73.0979;InbreedingCoeff=-0.0370;MQ=74.48;MQ0=0;MQRankSum=-4.646;QD=4.73;ReadPosRankSum=1.155;VQSLOD=0.5045;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:39.12:0,39,473	0/1:21,10:31:99:350,0,437	0/0:19,0:19:51.09:0,51,593	0/0:10,0:11:32.77:0,33,373	0/0:40,0:40:99:0,117,1437	0/0:25,0:25:72.23:0,72,892	0/0:19,0:19:54.15:0,54,656	0/0:34,0:34:96.29:0,96,1169	0/0:27,0:27:81.25:0,81,1002	0/0:24,0:24:72.23:0,72,893	0/0:15,0:15:42.13:0,42,520	0/0:13,0:13:39.12:0,39,483	0/0:22,0:22:66.19:0,66,804	0/0:18,0:18:51.13:0,51,607	0/0:18,0:18:54.17:0,54,669	0/0:21,0:21:63.20:0,63,781	0/1:25,4:29:22.30:22,0,603	0/0:15,0:15:45.14:0,45,557	0/0:19,0:19:51.16:0,51,632	0/0:25,0:25:69.22:0,69,853	0/0:25,0:25:69.20:0,69,841	0/0:18,0:18:48.13:0,48,581	0/0:20,0:20:60.19:0,60,744	0/0:17,0:17:45.14:0,45,558	0/0:16,0:16:48.15:0,48,594	0/0:30,0:30:87.27:0,87,1077	0/0:30,0:30:90.26:0,90,1101	0/0:9,0:9:27.05:0,27,307
chr10	44470941	.	GA	G	306.30	PASS	AB=0.765;AC=2;AF=0.036;AN=56;BaseQRankSum=6.987;DP=604;FS=0.000;HRun=2;HaplotypeScore=62.0087;InbreedingCoeff=-0.0372;MQ=77.20;MQ0=0;MQRankSum=-5.304;QD=6.38;ReadPosRankSum=-1.511;VQSLOD=0.0720;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:39.12:0,39,564	0/1:11,7:18:99:197,0,399	0/0:17,1:18:34.55:0,35,445	0/0:9,0:9:23.75:0,24,323	0/0:29,0:29:87.29:0,87,1303	0/0:27,0:27:78.25:0,78,1149	0/0:18,0:18:54.18:0,54,810	0/0:28,0:28:84.28:0,84,1241	0/0:26,0:26:78.26:0,78,1151	0/0:32,0:32:93.30:0,93,1354	0/0:13,0:13:39.13:0,39,585	0/0:23,0:23:69.23:0,69,1028	0/0:28,0:28:84.28:0,84,1259	0/0:16,0:16:48.15:0,48,701	0/0:22,0:22:66.22:0,66,989	0/0:18,0:18:54.18:0,54,810	0/1:23,7:30:99:198,0,857	0/0:13,0:13:36.12:0,36,539	0/0:21,0:21:63.21:0,63,945	0/0:32,0:32:96.33:0,96,1436	0/0:20,0:20:60.20:0,60,899	0/0:14,0:14:42.13:0,42,610	0/0:26,0:26:78.25:0,78,1149	0/0:21,0:21:63.21:0,63,944	0/0:20,0:20:60.20:0,60,898	0/0:29,0:29:84.28:0,84,1245	0/0:31,0:31:93.30:0,93,1369	0/0:8,0:8:24.08:0,24,357
chr10	44471021	.	A	AT	838.76	PASS	AB=0.730;AC=2;AF=0.036;AN=56;BaseQRankSum=8.461;DP=716;FS=1.556;HRun=2;HaplotypeScore=73.9775;InbreedingCoeff=-0.0371;MQ=88.71;MQ0=0;MQRankSum=-5.400;QD=10.48;ReadPosRankSum=-0.175;VQSLOD=1.5042;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:84.25:0,84,1029	0/1:18,12:30:99:440,0,442	0/0:34,0:34:84.26:0,84,1041	0/0:18,0:18:45.13:0,45,547	0/0:29,0:29:87.25:0,87,1064	0/0:19,0:19:54.15:0,54,655	0/0:26,0:26:78.20:0,78,929	0/0:35,0:35:93.28:0,93,1135	0/0:24,0:24:66.21:0,66,818	0/0:22,0:22:63.20:0,63,781	0/0:24,0:24:69.19:0,69,830	0/0:22,0:22:60.19:0,60,743	0/0:23,0:23:66.21:0,66,818	0/0:17,0:17:51.16:0,51,632	0/0:29,0:29:87.26:0,87,1066	0/0:26,0:26:75.24:0,75,930	0/1:33,17:50:99:488,0,988	0/0:13,0:13:30.09:0,30,367	0/0:21,0:21:57.18:0,57,707	0/0:39,0:39:99:0,111,1375	0/0:20,0:20:60.19:0,60,743	0/0:14,0:14:42.13:0,42,521	0/0:31,0:31:93.28:0,93,1139	0/0:18,0:18:51.16:0,51,632	0/0:25,0:25:72.23:0,72,893	0/0:25,0:25:75.24:0,75,930	0/0:41,0:41:99:0,114,1413	0/0:11,0:11:33.10:0,33,409
chr10	44472277	.	CTT	C	1121.44	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.071;DP=773;FS=0.000;HRun=3;HaplotypeScore=104.7108;InbreedingCoeff=0.9990;MQ=80.54;MQ0=0;MQRankSum=-3.401;QD=40.05;ReadPosRankSum=-2.771;VQSLOD=2.4443;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,154,2915	0/0:18,0:18:54.18:0,54,1025	0/0:21,0:21:60.20:0,60,1128	0/0:25,0:24:68.82:0,69,1213	0/0:35,0:35:99:0,105,1986	0/0:24,0:24:63.21:0,63,1178	0/0:32,0:32:96.31:0,96,1792	1/1:1,27:28:81.26:1216,81,0	0/0:20,0:20:60.15:0,60,1052	0/0:31,0:31:93.31:0,93,1757	0/0:23,0:23:69.21:0,69,1264	0/0:27,0:27:81.19:0,81,1456	0/0:26,0:26:78.24:0,78,1401	0/0:17,0:17:51.13:0,51,936	0/0:37,0:37:99:0,111,2038	0/0:26,0:26:78.27:0,78,1493	0/0:63,0:63:99:0,184,3363	0/0:31,0:31:93.11:0,93,1644	0/0:25,0:25:75.26:0,75,1428	0/0:34,0:34:96.30:0,96,1748	0/0:25,0:25:72.25:0,72,1391	0/0:22,0:22:63.19:0,63,1151	0/0:21,0:21:63.21:0,63,1159	0/0:23,0:23:69.20:0,69,1265	0/0:22,0:22:66.23:0,66,1275	0/0:29,0:29:84.28:0,84,1588	0/0:28,0:27:84.27:0,84,1588	0/0:9,0:9:27.09:0,27,522
chr10	44472480	.	TTGC	T	1752.46	PASS	AB=0.804;AC=14;AF=0.250;AN=56;BaseQRankSum=11.766;DP=765;FS=7.818;HRun=0;HaplotypeScore=205.7068;InbreedingCoeff=0.8198;MQ=69.74;MQ0=5;MQRankSum=-8.608;QD=12.89;ReadPosRankSum=0.871;VQSLOD=2.5929;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:46:99:0,138,2495	0/0:21,0:21:60.16:0,60,1238	0/0:38,0:31:67.07:0,67,1094	0/0:39,0:33:92.26:0,92,1576	0/0:35,0:35:95.30:0,95,1658	0/0:23,0:23:69.15:0,69,1298	0/0:31,0:31:75.57:0,76,1629	1/1:24,0:24:20.98:153,21,0	0/0:24,0:24:41:0,41,1252	0/0:30,0:30:90.27:0,90,1764	0/0:26,0:26:78.20:0,78,1471	1/1:9,19:28:32.02:597,32,0	1/1:8,10:18:17.34:352,17,0	1/1:6,11:17:27.30:404,27,0	0/0:43,0:43:99:0,114,2348	0/0:34,0:34:78.12:0,78,1607	0/0:57,0:57:99:0,161,3233	0/0:13,0:13:35.94:0,36,620	0/0:12,0:11:33.05:0,33,465	0/0:32,0:32:92.95:0,93,1747	0/0:33,0:33:96.11:0,96,1640	0/1:5,9:14:5.02:170,0,5	1/1:9,7:16:1.15:110,1,0	1/1:9,4:13:10.08:143,10,0	0/0:18,0:18:42.13:0,42,874	0/0:28,0:28:84.21:0,84,1522	0/0:45,0:45:99:0,129,2599	0/1:6,0:6:0.05:0,0,323
chr10	44472495	.	TTGTTG	T	1242.86	PASS	AB=0.651;AC=6;AF=0.107;AN=56;BaseQRankSum=11.376;DP=776;FS=3.602;HRun=0;HaplotypeScore=236.5041;InbreedingCoeff=-0.0275;MQ=59.09;MQ0=5;MQRankSum=-10.602;QD=11.20;ReadPosRankSum=4.907;VQSLOD=2.1853;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:44:99:0,129,3553	0/0:25,0:25:75.26:0,75,2133	0/0:38,0:27:78.26:0,78,1767	0/0:46,0:40:99:0,117,2774	0/0:28,0:28:80.40:0,80,2229	0/0:23,0:23:69.24:0,69,2004	0/0:32,0:32:93.21:0,93,2701	0/0:26,0:26:74.98:0,75,673	0/0:20,0:20:60.18:0,60,1804	0/0:31,0:31:93.29:0,93,2526	0/0:32,0:32:93.26:0,93,2065	0/1:13,19:32:99:542,0,188	0/1:9,11:20:99:303,0,180	0/1:7,12:19:4.24:353,0,4	0/0:39,0:39:99:0,99,2937	0/0:38,0:38:72.25:0,72,2242	0/0:65,0:65:99:0,186,5129	0/0:12,0:12:27.09:0,27,836	0/0:11,0:10:30.09:0,30,764	0/0:29,0:29:87.28:0,87,2513	0/0:27,0:27:78.27:0,78,2315	0/1:7,9:16:99:126,0,135	0/1:7,7:14:15.41:15,0,147	0/1:6,4:9:27.49:27,0,54	0/0:19,0:19:39.13:0,39,1080	0/0:28,0:28:84.28:0,84,2221	0/0:45,0:45:99:0,132,4006	0/0:6,0:6:17.98:0,18,478
chr10	44472501	.	C	CTGT	6710.49	PASS	AB=0.933;AC=15;AF=0.268;AN=56;BaseQRankSum=-11.374;DP=748;FS=2.227;HRun=0;HaplotypeScore=183.0816;InbreedingCoeff=0.8340;MQ=63.83;MQ0=4;MQRankSum=2.554;QD=31.36;ReadPosRankSum=3.235;VQSLOD=5.4410;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,108,1590	0/0:25,0:25:66.22:0,66,994	0/0:38,0:29:68.15:0,68,972	0/0:48,0:42:73.53:0,74,1197	0/0:25,0:25:53.43:0,53,756	0/0:25,0:25:69.21:0,69,1017	0/0:30,0:30:72.24:0,72,1085	1/1:19,0:19:11.82:85,12,0	0/0:22,0:22:57.17:0,57,834	1/1:8,25:33:78.27:1523,78,0	1/1:3,22:25:57.19:1057,57,0	0/0:23,0:24:47.30:0,47,317	0/0:16,0:16:29.35:0,29,195	0/0:18,0:18:28.76:0,29,174	1/1:4,33:38:81.28:1710,81,0	1/1:1,38:40:66.23:1400,66,0	0/0:63,0:63:99:0,142,2248	1/1:2,11:13:24.08:494,24,0	0/0:12,0:11:30.10:0,30,450	0/0:31,0:31:75.19:0,75,1034	0/0:27,0:27:69.21:0,69,1016	0/0:14,0:14:8.92:0,9,58	0/0:11,0:11:2.20:0,2,9	0/0:9,0:8:2.98:0,3,21	1/1:5,12:18:18.06:381,18,0	0/1:26,2:28:60.27:60,0,802	0/0:46,0:46:99:0,117,1758	0/0:9,0:9:21.04:0,21,271
chr10	44472502	.	TGTTG	T	1582.55	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=13.957;DP=741;FS=3.645;HRun=0;HaplotypeScore=210.3404;InbreedingCoeff=0.9810;MQ=64.32;MQ0=4;MQRankSum=-12.450;QD=13.88;ReadPosRankSum=0.606;VQSLOD=3.4177;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,120,3183	0/0:25,0:25:75.23:0,75,1993	0/0:37,0:28:84.25:0,84,2074	0/0:48,0:42:99:0,120,2880	0/0:25,0:25:70.77:0,71,1778	0/0:25,0:25:75.26:0,75,2031	0/0:30,0:30:90.28:0,90,2391	1/1:19,0:19:38.69:204,39,0	0/0:22,0:22:66.23:0,66,1748	0/0:32,0:32:89.79:0,90,1703	0/0:24,0:24:69.23:0,69,1347	1/1:8,18:26:50.91:560,51,0	1/1:6,11:17:26.47:312,26,0	1/1:6,12:18:33.52:362,34,0	0/0:37,0:37:90.31:0,90,1820	0/0:40,0:40:69.19:0,69,1458	0/0:62,0:62:99:0,179,4691	0/0:13,0:13:27.09:0,27,574	0/0:11,0:10:30.10:0,30,834	0/0:31,0:31:90.29:0,90,2364	0/0:27,0:27:75.25:0,75,2090	1/1:5,9:14:17.30:164,17,0	1/1:5,6:11:15.37:116,15,0	1/1:5,4:8:7.99:60,8,0	0/0:17,0:17:30.10:0,30,638	0/0:28,0:28:84.28:0,84,2128	0/0:45,0:45:99:0,132,3611	0/0:7,0:7:21.07:0,21,564
chr10	44472509	.	G	GTC	2366.80	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=14.182;DP=751;FS=1.478;HRun=0;HaplotypeScore=192.1988;InbreedingCoeff=0.9723;MQ=71.72;MQ0=2;MQRankSum=-12.939;QD=18.35;ReadPosRankSum=0.128;VQSLOD=3.8610;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,114,1742	0/0:24,0:24:72.24:0,72,1099	0/0:38,0:31:90.27:0,90,1325	0/0:53,0:47:99:0,123,1798	0/0:20,0:20:60.16:0,60,838	0/0:25,0:25:75.25:0,75,1148	0/0:32,0:32:90.28:0,90,1331	1/1:3,21:24:72.15:1233,72,0	0/0:23,0:23:66.69:0,67,1000	0/0:30,0:30:55.41:0,55,293	0/0:25,0:25:43.73:0,44,285	1/1:20,7:27:51.81:376,52,0	1/1:14,6:20:18.18:192,18,0	1/1:13,7:20:30.71:292,31,0	0/0:35,0:35:48.43:0,48,183	0/0:42,0:42:47.48:0,47,200	0/0:62,0:62:99:0,167,2486	0/0:14,0:14:17.76:0,18,100	0/0:12,0:11:33.10:0,33,485	0/0:28,0:28:81.25:0,81,1198	0/0:26,0:26:77.99:0,78,1137	1/1:9,5:14:14.71:181,15,0	1/1:10,5:15:12.04:205,12,0	1/1:4,5:8:8.55:80,9,0	0/0:16,0:16:14.54:0,15,111	0/0:27,0:27:72.59:0,73,1027	0/0:44,0:43:99:0,126,1904	0/0:7,0:7:21.04:0,21,279
chr10	44472519	.	TTG	T	223.83	PASS	AB=0.698;AC=7;AF=0.125;AN=56;BaseQRankSum=12.055;DP=743;FS=0.000;HRun=0;HaplotypeScore=198.9949;InbreedingCoeff=0.0968;MQ=76.15;MQ0=0;MQRankSum=-10.506;QD=1.72;ReadPosRankSum=3.364;VQSLOD=2.4682;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,120,2276	0/0:25,0:25:75.26:0,75,1480	0/0:32,0:28:84.25:0,84,1529	0/0:48,0:46:99:0,129,2500	0/0:17,0:17:51.16:0,51,961	0/0:26,0:26:78.27:0,78,1551	0/0:28,0:28:84.29:0,84,1690	0/1:35,1:36:87.82:88,0,347	0/0:26,0:26:78.27:0,78,1562	0/0:30,0:30:88.85:0,89,1736	0/0:22,0:22:62.43:0,62,1207	0/1:12,18:30:99:120,0,104	0/1:8,12:20:19.04:57,0,19	0/1:10,11:21:33.14:57,0,33	0/0:38,0:38:99:0,102,1939	0/0:37,0:37:78.27:0,78,1547	0/0:58,0:58:99:0,163,3246	0/0:16,0:16:33.11:0,33,636	0/0:10,0:10:30.10:0,30,608	0/0:27,0:27:81.28:0,81,1619	0/0:29,0:29:84.29:0,84,1610	0/1:5,9:14:5.58:16,0,6	0/0:9,7:16:3.84:0,4,53	1/1:5,4:8:1.54:4,2,0	0/0:14,0:14:27.07:0,27,440	0/0:26,0:26:78.25:0,78,1499	0/0:42,0:41:99:0,123,2456	0/0:5,0:5:15.05:0,15,303
chr10	44472530	.	GTA	G	77.72	PASS	AB=0.725;AC=7;AF=0.125;AN=56;BaseQRankSum=12.400;DP=730;FS=0.564;HRun=0;HaplotypeScore=201.9054;InbreedingCoeff=0.1367;MQ=86.63;MQ0=0;MQRankSum=-11.136;QD=0.56;ReadPosRankSum=-1.876;VQSLOD=2.4541;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,99,1848	0/0:26,0:26:75.26:0,75,1447	0/0:33,0:33:93.76:0,94,1677	0/0:45,0:45:99:0,120,2054	0/0:16,0:16:48.15:0,48,885	0/0:23,0:23:66.20:0,66,1208	0/0:29,0:29:84.27:0,84,1569	0/1:40,0:40:61.87:62,0,151	0/0:24,0:24:66.21:0,66,1241	0/0:31,0:31:93.31:0,93,1766	0/0:22,0:22:66.21:0,66,1218	0/1:15,16:31:41.86:42,0,69	0/1:8,12:20:7.64:34,0,8	0/1:15,10:25:13.98:45,0,14	0/0:36,0:36:87.30:0,87,1646	0/0:34,0:34:78.23:0,78,1428	0/0:51,0:51:99:0,141,2614	0/0:18,0:18:48.02:0,48,794	0/0:15,0:15:45.13:0,45,758	0/0:27,0:27:81.28:0,81,1552	0/0:27,0:27:75.26:0,75,1447	0/1:6,9:15:5.31:7,0,5	0/0:11,6:17:3.84:0,4,41	1/1:5,3:8:1.08:3,1,0	0/0:17,0:17:36.11:0,36,661	0/0:24,0:24:72.25:0,72,1390	0/0:35,0:34:99:0,99,1839	0/0:4,0:4:12.04:0,12,232
chr10	44472659	.	TG	T	437.99	PASS	AB=0.792;AC=2;AF=0.036;AN=56;BaseQRankSum=7.079;DP=577;FS=3.549;HRun=1;HaplotypeScore=62.6492;InbreedingCoeff=-0.0376;MQ=86.28;MQ0=0;MQRankSum=-2.641;QD=9.12;ReadPosRankSum=1.212;VQSLOD=1.2732;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:48.15:0,48,738	0/1:12,2:14:41.74:42,0,510	0/0:24,0:24:65.97:0,66,927	0/0:16,1:17:42.72:0,43,616	0/0:26,0:26:78.16:0,78,1212	0/0:19,0:18:57.19:0,57,909	0/0:6,0:6:18.06:0,18,288	0/0:31,0:31:93.27:0,93,1450	0/0:18,0:18:54.18:0,54,863	0/0:30,0:30:90.30:0,90,1419	0/0:33,0:33:99:0,99,1536	0/0:15,0:15:42.14:0,42,669	0/0:25,0:25:75.26:0,75,1198	0/0:18,0:18:51.17:0,51,813	0/0:23,0:23:69.24:0,69,1103	0/0:20,0:20:60.20:0,60,957	0/1:20,14:34:99:485,0,832	0/0:17,0:17:51.13:0,51,787	0/0:14,0:14:39.13:0,39,624	0/0:25,0:25:75.26:0,75,1196	0/0:21,0:21:63.21:0,63,1007	0/0:11,0:11:33.11:0,33,528	0/0:23,0:23:69.24:0,69,1101	0/0:8,0:8:24.06:0,24,359	0/0:20,0:20:60.20:0,60,959	0/0:27,0:27:81.28:0,81,1295	0/0:34,0:34:99:0,99,1577	0/0:8,0:8:20.31:0,20,334
chr10	44472739	.	C	CA	588.29	PASS	AB=0.800;AC=3;AF=0.054;AN=56;BaseQRankSum=8.308;DP=522;FS=13.822;HRun=6;HaplotypeScore=65.5921;InbreedingCoeff=-0.0607;MQ=71.64;MQ0=0;MQRankSum=-2.202;QD=8.53;ReadPosRankSum=-0.442;VQSLOD=0.0904;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:54.12:0,54,551	0/1:10,9:19:99:291,0,166	0/0:20,0:16:16.23:0,16,330	0/1:11,0:10:10.07:10,0,103	0/0:27,0:27:72.14:0,72,728	0/0:24,0:24:72.16:0,72,735	0/0:15,0:15:45.10:0,45,459	0/0:24,0:24:54.09:0,54,541	0/0:14,0:14:36.07:0,36,367	0/0:22,0:22:51.08:0,51,508	0/0:28,0:28:75.17:0,75,765	0/0:9,0:9:24:0,24,227	0/0:21,0:21:60.14:0,60,612	0/0:19,0:19:54.04:0,54,529	0/0:21,0:21:57.13:0,57,581	0/0:19,0:19:57.13:0,57,582	0/1:24,15:39:99:383,0,450	0/0:21,0:21:50.51:0,51,536	0/0:12,0:12:33.07:0,33,337	0/0:26,0:26:72.16:0,72,734	0/0:4,0:4:12.03:0,12,122	0/0:8,0:8:24.04:0,24,238	0/0:16,0:16:39.08:0,39,398	0/0:2,0:2:6.01:0,6,61	0/0:26,0:26:78.17:0,78,789	0/0:18,0:18:48.09:0,48,480	0/0:26,0:26:72.14:0,72,726	0/0:11,0:11:33.08:0,33,337
chr10	44473173	.	A	ATGTT	293.18	PASS	AB=0.708;AC=1;AF=0.018;AN=56;BaseQRankSum=4.137;DP=730;FS=0.000;HRun=0;HaplotypeScore=119.8744;InbreedingCoeff=-0.0182;MQ=83.72;MQ0=0;MQRankSum=-2.849;QD=17.25;ReadPosRankSum=-0.087;VQSLOD=3.1496;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,126,2338	0/1:10,7:17:99:368,0,481	0/0:24,0:24:61.72:0,62,1178	0/0:18,0:18:40.95:0,41,700	0/0:33,0:33:99:0,99,1869	0/0:28,0:27:84.29:0,84,1610	0/0:30,0:30:90.29:0,90,1710	0/0:40,0:40:99:0,117,2230	0/0:32,0:32:90.27:0,90,1698	0/0:32,0:32:96.31:0,96,1814	0/0:20,0:20:60.19:0,60,1113	0/0:25,0:25:75.24:0,75,1421	0/0:26,0:26:72.23:0,72,1348	0/0:22,0:22:63.20:0,63,1188	0/0:34,0:34:99:0,99,1867	0/0:22,0:22:66.20:0,66,1213	0/0:24,0:24:72.25:0,72,1396	0/0:24,0:24:72.25:0,72,1381	0/0:21,0:21:60.18:0,60,1097	0/0:22,0:22:66.21:0,66,1238	0/0:40,0:40:99:0,120,2200	0/0:23,0:23:66.23:0,66,1259	0/0:24,0:24:72.25:0,72,1369	0/0:18,0:18:54.12:0,54,975	0/0:28,0:28:84.29:0,84,1629	0/0:19,0:19:54.18:0,54,1039	0/0:21,0:21:63.22:0,63,1221	0/0:19,0:19:57.20:0,57,1105
chr10	44473775	.	G	GGAGCAGAGCA	8982.05	PASS	AB=0.917;AC=26;AF=0.464;AN=56;BaseQRankSum=5.423;DP=788;FS=3.535;HRun=0;HaplotypeScore=233.6172;InbreedingCoeff=0.6991;MQ=80.78;MQ0=2;MQRankSum=-5.655;QD=20.55;ReadPosRankSum=0.643;VQSLOD=3.9891;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:87.22:0,87,2147	0/0:14,0:14:33.11:0,33,987	0/1:50,0:42:39.43:39,0,198	0/1:71,0:46:7.44:7,0,356	0/0:24,0:24:42.14:0,42,1167	0/0:26,0:25:54.16:0,54,1436	0/0:25,0:25:48.15:0,48,1323	0/0:33,0:33:48.12:0,48,958	0/0:29,0:29:63.18:0,63,1689	1/1:12,0:32:53.70:759,54,0	1/1:6,0:17:30.07:306,30,0	1/1:10,20:31:42.14:2088,42,0	1/1:12,13:25:30.10:1443,30,0	1/1:9,14:24:12.04:596,12,0	1/1:14,0:32:30.07:331,30,0	1/1:7,0:25:45.10:460,45,0	0/0:20,0:20:39.13:0,39,1162	1/1:7,0:22:42.10:429,42,0	0/0:20,0:20:21.07:0,21,586	0/0:32,0:33:69.21:0,69,1809	0/0:34,0:34:60.21:0,60,1646	1/1:11,9:24:11.77:569,12,0	1/1:13,15:29:30.10:1490,30,0	1/1:12,7:21:6.02:298,6,0	0/1:8,0:15:71.53:135,0,72	0/1:15,0:15:29.74:30,0,646	0/0:26,0:26:57.18:0,57,1639	0/0:14,0:14:33.11:0,33,986
chr10	44474202	.	A	AC	1319.35	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-9.964;DP=750;FS=7.755;HRun=3;HaplotypeScore=75.9153;InbreedingCoeff=0.9999;MQ=88.96;MQ0=0;MQRankSum=-0.460;QD=35.66;ReadPosRankSum=-5.002;VQSLOD=1.5478;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:93.27:0,93,1106	0/0:16,0:16:48.09:0,48,557	0/0:26,0:26:75.12:0,75,814	0/0:28,0:28:62.94:0,63,690	0/0:29,0:29:84.22:0,84,974	0/0:25,0:24:75.20:0,75,870	0/0:25,0:25:72.17:0,72,820	1/1:1,36:37:99:1414,105,0	0/0:20,0:20:54.16:0,54,638	0/0:25,0:25:75.21:0,75,877	0/0:22,0:22:66.16:0,66,766	0/0:30,0:30:84.22:0,84,983	0/0:26,0:26:75.21:0,75,878	0/0:24,0:24:69.19:0,69,806	0/0:31,0:31:90.25:0,90,1057	0/0:34,0:34:96.26:0,96,1119	0/0:25,0:25:75.22:0,75,888	0/0:21,0:21:57.14:0,57,659	0/0:17,0:17:39.12:0,39,468	0/0:35,0:35:99:0,99,1172	0/0:21,0:21:63.16:0,63,732	0/0:26,0:26:72.14:0,72,818	0/0:22,0:22:66.20:0,66,792	0/0:37,0:37:99:0,108,1264	0/0:26,0:26:78.18:0,78,889	0/0:34,0:34:93.27:0,93,1098	0/0:37,0:37:99:0,108,1257	0/0:16,0:16:48.15:0,48,576
chr10	44474423	.	G	GC	859.50	PASS	AB=0.768;AC=2;AF=0.036;AN=56;BaseQRankSum=6.565;DP=769;FS=6.519;HRun=0;HaplotypeScore=77.6480;InbreedingCoeff=-0.0371;MQ=86.93;MQ0=0;MQRankSum=-3.285;QD=11.61;ReadPosRankSum=0.133;VQSLOD=3.6677;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,117,1564	0/1:14,4:18:57.75:58,0,521	0/0:32,0:32:91.35:0,91,1118	0/0:23,0:23:60.09:0,60,814	0/0:23,0:23:69.23:0,69,961	0/0:19,0:19:57.18:0,57,782	0/0:19,0:19:57.16:0,57,762	0/0:39,0:38:99:0,111,1525	0/0:26,0:26:75.24:0,75,1032	0/0:23,0:23:69.22:0,69,948	0/0:22,0:22:66.21:0,66,906	0/0:34,0:34:99:0,99,1367	0/0:43,0:43:99:0,126,1724	0/0:27,0:27:81.24:0,81,1096	0/0:28,0:28:78.26:0,78,1090	0/0:47,0:47:99:0,141,1939	0/1:34,22:56:99:891,0,1179	0/0:23,0:23:66.22:0,66,923	0/0:20,0:20:57.17:0,57,778	0/0:21,0:21:63.20:0,63,866	0/0:23,0:23:69.16:0,69,878	0/0:22,0:22:66.21:0,66,905	0/0:22,0:22:63.19:0,63,861	0/0:23,0:23:66.22:0,66,919	0/0:17,0:17:51.16:0,51,699	0/0:36,0:36:99:0,105,1423	0/0:32,0:32:96.29:0,96,1293	0/0:10,0:10:24.08:0,24,336
chr10	44475985	.	A	AC	372.01	PASS	AB=0.718;AC=2;AF=0.036;AN=56;BaseQRankSum=5.887;DP=499;FS=3.984;HRun=0;HaplotypeScore=57.4507;InbreedingCoeff=-0.0410;MQ=82.52;MQ0=0;MQRankSum=-5.549;QD=10.94;ReadPosRankSum=-1.311;VQSLOD=3.3075;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:84.28:0,84,1174	0/1:7,7:14:99:273,0,252	0/0:17,0:17:33.15:0,33,557	0/0:14,0:14:39.13:0,39,528	0/0:26,0:26:78.25:0,78,1073	0/0:26,0:26:78.23:0,78,1041	0/0:15,0:15:42.14:0,42,587	0/0:26,0:26:78.25:0,78,1072	0/0:15,0:15:45.15:0,45,629	0/0:17,0:17:51.15:0,51,680	0/0:18,0:18:54.18:0,54,755	0/0:17,0:17:51.17:0,51,712	0/0:9,0:9:27.09:0,27,376	0/0:10,0:10:30.10:0,30,419	0/0:20,0:20:60.19:0,60,816	0/0:13,0:13:39.13:0,39,545	0/1:14,6:20:99:188,0,452	0/0:20,0:20:54.14:0,54,733	0/0:15,0:15:45.13:0,45,611	0/0:24,0:24:72.24:0,72,1005	0/0:23,0:23:69.21:0,69,920	0/0:19,0:19:57.18:0,57,782	0/0:20,0:20:60.19:0,60,816	0/0:11,0:11:26.97:0,27,310	0/0:20,0:20:60.20:0,60,839	0/0:22,0:22:66.22:0,66,923	0/0:16,0:16:48.15:0,48,655	0/0:2,0:2:6.02:0,6,84
chr10	44476038	.	C	CCACA	3459.83	PASS	AB=0.960;AC=40;AF=0.800;AN=50;BaseQRankSum=1.739;DP=490;FS=0.834;HRun=0;HaplotypeScore=135.9448;InbreedingCoeff=0.4231;MQ=58.73;MQ0=13;MQRankSum=-3.835;QD=10.03;ReadPosRankSum=-2.245;VQSLOD=2.9167;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:30:0.89:0,1,2	1/1:11,6:19:8.20:174,8,0	./.	./.	./.	0/0:22,0:22:35.37:0,35,469	0/1:15,0:18:7.58:8,0,310	1/1:30,0:29:19.77:234,20,0	0/0:10,0:10:12.03:0,12,168	1/1:12,0:14:15.96:205,16,0	1/1:15,0:17:5.94:117,6,0	1/1:17,0:17:9.01:119,9,0	1/1:9,0:10:15.04:184,15,0	1/1:13,0:13:3.01:30,3,0	1/1:10,4:15:17.79:335,18,0	1/1:9,5:16:23.82:499,24,0	1/1:8,1:12:6.02:89,6,0	0/1:21,2:21:25.63:224,0,26	1/1:13,0:12:6.01:70,6,0	1/1:19,0:23:13.44:212,13,0	1/1:17,0:17:12.50:190,12,0	0/0:20,0:20:0.88:0,1,2	1/1:14,0:13:1.24:3,1,0	1/1:14,0:12:2.99:24,3,0	1/1:17,3:20:15.05:293,15,0	1/1:19,0:19:21.07:272,21,0	1/1:12,0:12:12.01:134,12,0	1/1:5,0:6:3.01:44,3,0
chr10	44476094	.	TA	T	6090.40	PASS	AB=0.938;AC=27;AF=0.482;AN=56;BaseQRankSum=10.720;DP=456;FS=9.002;HRun=2;HaplotypeScore=75.3042;InbreedingCoeff=0.9178;MQ=79.54;MQ0=2;MQRankSum=-3.310;QD=29.42;ReadPosRankSum=0.408;VQSLOD=3.5261;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:44.93:0,45,637	0/1:14,1:15:62.75:63,0,258	0/0:23,0:20:54.14:0,54,740	0/0:13,0:12:26.18:0,26,363	0/0:18,0:18:48.16:0,48,710	0/0:19,0:19:46.71:0,47,766	0/0:20,0:20:57.14:0,57,767	1/1:0,29:29:87.23:1082,87,0	0/0:15,0:15:45.02:0,45,635	1/1:1,16:17:48.12:581,48,0	1/1:0,15:15:42.14:544,42,0	1/1:0,14:14:33.11:427,33,0	1/1:0,16:16:42.14:543,42,0	1/1:0,7:7:12.04:156,12,0	1/1:1,11:12:18.06:233,18,0	1/1:1,16:17:30.10:388,30,0	0/0:24,0:23:26.75:0,27,695	1/1:1,11:12:24.08:311,24,0	0/0:12,0:12:36.12:0,36,532	0/0:21,0:21:57.15:0,57,785	0/0:19,0:18:51.17:0,51,753	1/1:0,10:10:30.10:388,30,0	1/1:1,11:12:27.09:350,27,0	1/1:0,13:13:33.02:404,33,0	1/1:1,17:18:48.16:622,48,0	0/0:16,1:17:12.45:0,12,637	0/0:18,0:18:54.09:0,54,691	0/0:7,0:7:21.07:0,21,309
chr10	44476099	.	TCA	T	130.50	PASS	AB=0.797;AC=2;AF=0.036;AN=56;BaseQRankSum=4.684;DP=475;FS=0.000;HRun=0;HaplotypeScore=105.3008;InbreedingCoeff=-0.0380;MQ=84.65;MQ0=1;MQRankSum=-4.307;QD=3.43;ReadPosRankSum=2.182;VQSLOD=2.1333;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:48.13:0,48,973	0/1:9,5:14:99:123,0,393	0/0:24,0:22:66.18:0,66,1295	0/0:17,0:16:45.12:0,45,848	0/0:18,0:18:48.16:0,48,974	0/0:18,0:18:54.19:0,54,1084	0/0:21,0:21:60.19:0,60,1171	0/0:29,0:29:87.23:0,87,1551	0/0:16,0:16:48.15:0,48,938	0/0:15,0:15:45.10:0,45,808	0/0:16,0:16:45.07:0,45,787	0/0:16,0:16:39.12:0,39,643	0/0:17,0:17:42.13:0,42,693	0/0:9,0:9:15.04:0,15,247	0/0:12,0:12:21.06:0,21,331	0/0:18,0:18:36.10:0,36,545	0/1:20,4:23:96.02:96,0,970	0/0:10,0:10:24.04:0,24,377	0/0:13,0:13:39.13:0,39,750	0/0:22,0:22:60.21:0,60,1207	0/0:18,0:18:54.19:0,54,1096	0/0:13,0:13:39.12:0,39,655	0/0:14,0:14:36.10:0,36,577	0/0:13,0:13:33.11:0,33,540	0/0:20,0:20:54.17:0,54,945	0/0:19,0:19:57.20:0,57,1156	0/0:18,0:18:54.19:0,54,1092	0/0:7,0:7:21.07:0,21,426
chr10	44476398	.	TA	T	1250.92	PASS	AB=0.666;AC=2;AF=0.036;AN=56;BaseQRankSum=7.047;DP=843;FS=1.961;HRun=2;HaplotypeScore=88.1501;InbreedingCoeff=-0.0372;MQ=84.00;MQ0=0;MQRankSum=-5.711;QD=14.22;ReadPosRankSum=0.054;VQSLOD=3.0207;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:58:99:0,175,2563	0/1:14,18:32:99:576,0,410	0/0:29,0:29:80.42:0,80,1130	0/0:26,0:26:67.99:0,68,757	0/0:33,0:32:96.31:0,96,1405	0/0:27,0:27:75.22:0,75,1080	0/0:27,0:27:81.27:0,81,1195	0/0:38,0:38:99:0,111,1646	0/0:15,0:15:42.14:0,42,628	0/0:34,0:34:99:0,102,1529	0/0:17,0:17:51.12:0,51,718	0/0:31,0:31:93.29:0,93,1354	0/0:39,0:39:99:0,117,1750	0/0:37,0:37:99:0,105,1573	0/0:33,0:33:99:0,99,1483	0/0:34,0:34:99:0,102,1527	0/1:31,25:56:99:764,0,1221	0/0:25,0:25:72.24:0,72,1073	0/0:24,0:24:72.21:0,72,1038	0/0:30,0:30:90.29:0,90,1312	0/0:39,0:39:99:0,117,1732	0/0:24,0:24:66.22:0,66,971	0/0:14,0:14:42.10:0,42,587	0/0:36,0:36:99:0,102,1507	0/0:20,0:20:57.18:0,57,818	0/0:29,0:29:81.27:0,81,1213	0/0:29,0:29:87.29:0,87,1301	0/0:7,0:7:21.07:0,21,306
chr10	44478080	.	CAGCT	C	305.70	PASS	AB=0.817;AC=2;AF=0.036;AN=56;BaseQRankSum=5.141;DP=760;FS=3.036;HRun=0;HaplotypeScore=131.2258;InbreedingCoeff=-0.0304;MQ=85.12;MQ0=0;MQRankSum=-3.895;QD=8.73;ReadPosRankSum=-0.239;VQSLOD=2.7981;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,135,3667	0/1:8,7:15:99:380,0,325	0/0:33,0:33:96.33:0,96,2578	0/0:30,0:30:73.97:0,74,2094	0/0:33,0:33:93.32:0,93,2579	0/0:22,0:22:60.21:0,60,1668	0/0:27,0:27:81.28:0,81,2205	0/0:34,0:34:96.33:0,96,2688	0/0:23,0:23:69.22:0,69,1868	0/0:22,0:22:66.23:0,66,1827	0/0:17,0:17:51.18:0,51,1416	0/0:34,0:34:96.33:0,96,2678	0/0:31,0:31:93.32:0,93,2591	0/0:24,0:24:72.25:0,72,1854	0/0:34,0:34:99:0,102,2761	0/0:24,0:24:72.21:0,72,1895	0/1:19,1:20:2.72:3,0,958	0/0:20,0:20:60.21:0,60,1678	0/0:25,0:25:69.24:0,69,1885	0/0:34,0:34:93.32:0,93,2532	0/0:28,0:28:81.28:0,81,2253	0/0:24,0:24:69.24:0,69,1918	0/0:15,0:15:45.15:0,45,1259	0/0:29,0:29:84.29:0,84,2350	0/0:35,0:35:99:0,105,2845	0/0:24,0:24:72.24:0,72,1923	0/0:47,0:47:99:0,141,3813	0/0:11,0:11:33.11:0,33,923
chr10	44478097	.	G	GT	186.97	PASS	AB=0.764;AC=2;AF=0.036;AN=56;BaseQRankSum=5.076;DP=744;FS=7.572;HRun=1;HaplotypeScore=91.5673;InbreedingCoeff=-0.0369;MQ=79.81;MQ0=0;MQRankSum=-5.106;QD=5.05;ReadPosRankSum=0.410;VQSLOD=0.0508;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,129,1658	0/1:6,6:12:82.27:254,0,82	0/0:29,0:29:78.22:0,78,964	0/0:23,0:23:56.13:0,56,672	0/0:40,0:40:99:0,111,1411	0/0:24,0:24:66.17:0,66,814	0/0:23,0:23:69.22:0,69,895	0/0:33,0:33:90.29:0,90,1169	0/0:29,0:29:84.26:0,84,1075	0/0:21,0:21:63.20:0,63,808	0/0:22,0:22:63.19:0,63,799	0/0:35,0:35:99:0,105,1363	0/0:30,0:30:84.27:0,84,1088	0/0:18,0:18:54.18:0,54,701	0/0:25,0:25:75.24:0,75,974	0/0:21,0:21:63.19:0,63,804	0/1:21,4:25:21.08:21,0,565	0/0:24,0:24:72.22:0,72,916	0/0:35,0:34:99:0,99,1253	0/0:23,0:23:66.17:0,66,838	0/0:25,0:25:66.21:0,66,857	0/0:20,0:20:57.17:0,57,726	0/0:17,0:17:48.13:0,48,597	0/0:33,0:33:96.25:0,96,1200	0/0:31,0:31:90.28:0,90,1154	0/0:27,0:27:75.22:0,75,956	0/0:42,0:42:99:0,126,1589	0/0:14,0:14:39.13:0,39,505
chr10	44478100	.	AGAGT	A	1023.51	PASS	AB=0.694;AC=2;AF=0.036;AN=56;BaseQRankSum=6.848;DP=740;FS=0.802;HRun=0;HaplotypeScore=127.6780;InbreedingCoeff=-0.0370;MQ=78.40;MQ0=0;MQRankSum=-4.317;QD=28.43;ReadPosRankSum=-0.464;VQSLOD=3.5314;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,123,3193	0/1:7,3:10:99:194,0,362	0/0:27,0:27:72.11:0,72,1771	0/0:22,0:22:39.79:0,40,1031	0/0:40,0:40:99:0,114,2875	0/0:21,0:21:57.20:0,57,1519	0/0:24,0:24:69.24:0,69,1808	0/0:32,0:32:84.28:0,84,2117	0/0:29,0:29:81.26:0,81,2078	0/0:22,0:22:60.20:0,60,1530	0/0:23,0:23:69.24:0,69,1788	0/0:35,0:35:99:0,105,2769	0/0:30,0:30:87.27:0,87,2158	0/0:18,0:18:48.16:0,48,1249	0/0:25,0:25:66.23:0,66,1755	0/0:23,0:23:63.22:0,63,1653	0/1:10,16:26:99:919,0,175	0/0:23,0:23:66.23:0,66,1708	0/0:34,0:33:84.29:0,84,2194	0/0:22,0:22:57.20:0,57,1511	0/0:26,0:26:72.20:0,72,1765	0/0:21,0:21:60.19:0,60,1506	0/0:14,0:14:42.13:0,42,1051	0/0:30,0:30:87.30:0,87,2306	0/0:32,0:32:93.32:0,93,2463	0/0:32,0:32:96.32:0,96,2474	0/0:42,0:42:99:0,123,3215	0/0:14,0:14:39.13:0,39,1037
chr10	44478116	.	C	CTTT	599.25	PASS	AB=0.735;AC=2;AF=0.036;AN=56;BaseQRankSum=6.734;DP=713;FS=9.018;HRun=7;HaplotypeScore=118.2840;InbreedingCoeff=-0.0393;MQ=78.17;MQ0=0;MQRankSum=-5.026;QD=13.94;ReadPosRankSum=-2.024;VQSLOD=-0.1904;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,120,1636	0/1:5,7:12:99:360,0,131	0/0:20,0:20:46.66:0,47,577	0/0:17,0:17:8.91:0,9,275	0/0:43,0:43:99:0,105,1363	0/0:20,0:20:57.17:0,57,760	0/0:25,0:25:69.21:0,69,925	0/0:24,0:24:51.06:0,51,646	0/0:26,0:26:69.18:0,69,891	0/0:25,0:25:63.19:0,63,859	0/0:22,0:22:56.90:0,57,732	0/0:33,0:33:96.31:0,96,1309	0/0:31,0:31:90.23:0,90,1160	0/0:18,0:18:45.12:0,45,614	0/0:23,0:23:60.18:0,60,819	0/0:22,0:22:60.17:0,60,802	0/1:25,6:31:99:328,0,653	0/0:22,0:22:57.17:0,57,778	0/0:22,0:21:54.11:0,54,676	0/0:22,0:22:54.16:0,54,737	0/0:22,0:22:60.13:0,60,780	0/0:27,0:27:75.22:0,75,1002	0/0:12,0:12:30.09:0,30,408	0/0:32,0:32:90.26:0,90,1190	0/0:34,0:34:78.22:0,78,1046	0/0:32,0:32:84.26:0,84,1129	0/0:41,0:41:99:0,117,1562	0/0:13,0:13:30.09:0,30,409
chr10	44478214	.	CA	C	900.22	PASS	AB=0.702;AC=2;AF=0.036;AN=56;BaseQRankSum=7.285;DP=661;FS=6.523;HRun=5;HaplotypeScore=72.5320;InbreedingCoeff=-0.0373;MQ=74.68;MQ0=0;MQRankSum=-2.205;QD=13.05;ReadPosRankSum=3.663;VQSLOD=2.0127;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:93.29:0,93,1253	0/1:16,6:22:99:141,0,549	0/0:17,0:17:39.13:0,39,534	0/0:22,0:22:53.54:0,54,699	0/0:19,0:19:57.19:0,57,780	0/0:19,0:19:54.18:0,54,738	0/0:27,0:27:78.26:0,78,1065	0/0:34,0:34:96.31:0,96,1301	0/0:20,0:20:48.16:0,48,657	0/0:25,0:25:69.23:0,69,943	0/0:12,0:12:36.12:0,36,492	0/0:23,0:23:69.22:0,69,927	0/0:25,0:25:72.22:0,72,952	0/0:20,0:20:51.16:0,51,683	0/0:22,0:22:66.22:0,66,903	0/0:26,0:26:75.25:0,75,1024	0/1:18,29:47:99:848,0,522	0/0:19,0:19:57.19:0,57,773	0/0:23,0:23:66.21:0,66,886	0/0:21,0:21:60.18:0,60,788	0/0:23,0:23:63.19:0,63,844	0/0:21,0:21:60.19:0,60,806	0/0:20,0:20:57.19:0,57,779	0/0:32,0:32:87.28:0,87,1172	0/0:25,0:25:72.24:0,72,984	0/0:20,0:20:54.18:0,54,738	0/0:37,0:37:99:0,99,1322	0/0:6,0:6:18.06:0,18,246
chr10	44478583	.	ATCT	A	808.18	PASS	AB=0.699;AC=2;AF=0.036;AN=56;BaseQRankSum=7.342;DP=655;FS=0.000;HRun=0;HaplotypeScore=106.2540;InbreedingCoeff=-0.0371;MQ=80.39;MQ0=0;MQRankSum=-3.517;QD=11.22;ReadPosRankSum=2.684;VQSLOD=3.0333;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,148,3282	0/1:8,9:17:99:255,0,430	0/0:17,0:17:42.14:0,42,860	0/0:21,0:21:54.01:0,54,979	0/0:24,0:24:72.25:0,72,1577	0/0:16,0:16:48.16:0,48,1040	0/0:18,0:18:51.18:0,51,1139	0/0:28,0:28:75.26:0,75,1604	0/0:22,0:22:66.23:0,66,1473	0/0:22,0:22:60.20:0,60,1307	0/0:16,0:16:45.15:0,45,1005	0/0:19,0:19:51.16:0,51,1066	0/0:23,0:23:66.23:0,66,1452	0/0:17,0:17:51.18:0,51,1122	0/0:28,0:28:78.25:0,78,1683	0/0:29,0:29:87.28:0,87,1901	0/1:36,19:55:99:642,0,1900	0/0:16,0:16:45.11:0,45,958	0/0:24,0:24:69.24:0,69,1468	0/0:24,0:24:66.23:0,66,1444	0/0:12,0:12:33.11:0,33,737	0/0:18,0:18:54.19:0,54,1206	0/0:17,0:17:45.15:0,45,1004	0/0:33,0:33:96.31:0,96,2099	0/0:16,0:16:45.15:0,45,975	0/0:23,0:23:63.21:0,63,1366	0/0:36,0:35:99:0,105,2344	0/0:14,0:14:33.11:0,33,706
chr10	44479925	.	TCA	T	1052.16	PASS	AB=0.640;AC=2;AF=0.036;AN=56;BaseQRankSum=7.199;DP=681;FS=4.972;HRun=0;HaplotypeScore=92.3900;InbreedingCoeff=-0.0372;MQ=95.64;MQ0=0;MQRankSum=-3.435;QD=19.85;ReadPosRankSum=1.580;VQSLOD=3.8216;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,111,2069	0/1:7,12:19:99:525,0,120	0/0:34,0:34:90.31:0,90,1680	0/0:33,0:33:90.31:0,90,1607	0/0:15,0:15:39.13:0,39,730	0/0:7,0:7:21.07:0,21,393	0/0:26,0:26:78.25:0,78,1427	0/0:20,0:20:45.15:0,45,840	0/0:31,0:31:93.31:0,93,1709	0/0:18,0:18:48.16:0,48,899	0/0:14,0:14:42.14:0,42,786	0/0:23,0:23:66.23:0,66,1226	0/0:30,0:30:84.29:0,84,1547	0/0:33,0:33:87.30:0,87,1615	0/0:44,0:44:99:0,126,2293	0/0:30,0:30:90.30:0,90,1655	0/1:17,17:34:99:616,0,664	0/0:29,0:29:87.28:0,87,1593	0/0:19,0:19:51.17:0,51,933	0/0:14,0:14:36.12:0,36,674	0/0:36,0:36:90.31:0,90,1668	0/0:17,0:17:48.16:0,48,899	0/0:11,0:11:27.09:0,27,505	0/0:29,0:29:87.30:0,87,1623	0/0:16,0:16:39.12:0,39,700	0/0:22,0:22:60.19:0,60,1089	0/0:23,0:23:69.24:0,69,1283	0/0:14,0:14:39.10:0,39,666
chr10	44480129	.	CTTGACCAG	C	1490.78	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.263;DP=827;FS=0.000;HRun=0;HaplotypeScore=213.3092;InbreedingCoeff=0.9960;MQ=89.02;MQ0=0;MQRankSum=-4.927;QD=57.34;ReadPosRankSum=-1.790;VQSLOD=2.7945;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:62,0:62:99:0,184,7519	0/0:25,0:25:69.22:0,69,2510	0/0:34,0:35:93.30:0,93,3667	0/0:29,0:29:74.61:0,75,2589	0/0:25,0:25:72.23:0,72,2973	0/0:22,0:22:63.22:0,63,2664	0/0:34,0:34:96.31:0,96,3940	1/1:5,21:26:63.15:1586,63,0	0/0:26,0:26:78.20:0,78,3340	0/0:40,0:40:99:0,117,5121	0/0:21,0:21:63.22:0,63,2536	0/0:44,0:44:99:0,129,5326	0/0:40,0:40:99:0,114,4878	0/0:32,0:32:90.28:0,90,3661	0/0:42,0:42:99:0,120,5122	0/0:31,0:31:93.32:0,93,3932	0/0:32,0:32:64.08:0,64,2585	0/0:24,0:24:69.24:0,69,2992	0/0:26,0:26:75.24:0,75,3067	0/0:25,0:25:75.26:0,75,3246	0/0:24,0:24:69.24:0,69,3037	0/0:27,0:27:78.27:0,78,3384	0/0:20,0:20:57.20:0,57,2368	0/0:19,0:19:54.19:0,54,2096	0/0:28,0:28:84.29:0,84,3674	0/0:33,0:33:99:0,99,3973	0/0:28,0:25:81.28:0,81,3500	0/0:7,0:7:21.07:0,21,931
chr10	44480726	.	G	GT	304.54	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.259;DP=733;FS=2.072;HRun=0;HaplotypeScore=80.0515;InbreedingCoeff=0.9994;MQ=66.44;MQ0=0;MQRankSum=-4.859;QD=15.23;ReadPosRankSum=-2.589;VQSLOD=4.1925;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,126,1630	0/0:15,0:15:42.14:0,42,586	0/0:23,0:23:62.23:0,62,836	0/0:26,0:25:45.79:0,46,900	0/0:25,0:25:72.24:0,72,1007	0/0:21,0:21:63.18:0,63,846	0/0:32,0:32:96.27:0,96,1273	1/1:7,11:20:47.06:399,47,0	0/0:30,0:30:90.27:0,90,1221	0/0:26,0:26:75.25:0,75,1048	0/0:20,0:20:60.20:0,60,839	0/0:22,0:22:63.19:0,63,863	0/0:31,0:31:93.30:0,93,1282	0/0:22,0:22:66.22:0,66,923	0/0:38,0:38:99:0,111,1519	0/0:27,0:27:81.24:0,81,1096	0/0:36,0:36:96.28:0,96,1304	0/0:16,0:16:48.16:0,48,669	0/0:23,0:23:69.22:0,69,948	0/0:33,0:33:96.32:0,96,1342	0/0:32,0:32:96.29:0,96,1306	0/0:25,0:25:75.23:0,75,1015	0/0:20,0:20:54.06:0,54,708	0/0:31,0:31:90.17:0,90,1146	0/0:20,0:20:59.95:0,60,759	0/0:26,0:26:78.26:0,78,1090	0/0:37,0:37:99:0,111,1514	0/0:11,0:11:30.10:0,30,419
chr10	44480727	.	A	ACCC	304.08	PASS	AB=0.656;AC=1;AF=0.018;AN=56;BaseQRankSum=5.732;DP=730;FS=6.148;HRun=0;HaplotypeScore=111.8882;InbreedingCoeff=-0.0179;MQ=67.12;MQ0=0;MQRankSum=-4.633;QD=14.48;ReadPosRankSum=-1.170;VQSLOD=2.9122;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,129,2273	0/0:15,0:15:42.14:0,42,782	0/0:24,0:23:62.87:0,63,1073	0/0:26,0:26:72.19:0,72,1254	0/0:25,0:25:72.25:0,72,1342	0/0:20,0:20:60.21:0,60,1111	0/0:32,0:32:96.32:0,96,1729	0/1:10,11:21:38.45:379,0,38	0/0:30,0:30:90.27:0,90,1589	0/0:26,0:26:78.25:0,78,1399	0/0:20,0:20:60.21:0,60,1117	0/0:21,0:21:60.21:0,60,1119	0/0:31,0:31:93.32:0,93,1726	0/0:23,0:23:66.23:0,66,1228	0/0:37,0:37:99:0,111,2039	0/0:28,0:28:78.25:0,78,1423	0/0:35,0:35:93.32:0,93,1699	0/0:16,0:16:48.14:0,48,861	0/0:23,0:23:69.24:0,69,1281	0/0:33,0:33:96.33:0,96,1789	0/0:31,0:31:90.31:0,90,1667	0/0:25,0:25:75.26:0,75,1387	0/0:20,0:20:57.17:0,57,1027	0/0:30,0:30:87.25:0,87,1544	0/0:21,0:21:60.20:0,60,1060	0/0:26,0:26:78.27:0,78,1450	0/0:36,0:36:99:0,108,2008	0/0:11,0:11:30.10:0,30,542
chr10	44480728	.	T	TA	608.97	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.235;DP=740;FS=1.641;HRun=1;HaplotypeScore=85.0327;InbreedingCoeff=0.9994;MQ=65.48;MQ0=0;MQRankSum=-6.197;QD=18.45;ReadPosRankSum=-3.502;VQSLOD=2.8954;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,126,1743	0/0:16,0:16:42.14:0,42,587	0/0:22,0:21:59.22:0,59,796	0/0:26,0:26:63.25:0,63,954	0/0:25,0:25:72.24:0,72,1004	0/0:20,0:20:60.20:0,60,839	0/0:31,0:31:93.30:0,93,1284	1/1:22,11:33:69.09:704,69,0	0/0:29,0:29:84.26:0,84,1155	0/0:26,0:26:75.25:0,75,1048	0/0:21,0:21:60.20:0,60,839	0/0:21,0:21:60.20:0,60,839	0/0:31,0:31:93.29:0,93,1282	0/0:24,0:24:69.22:0,69,946	0/0:38,0:38:99:0,111,1551	0/0:27,0:27:78.25:0,78,1075	0/0:35,0:35:93.31:0,93,1296	0/0:15,0:15:45.15:0,45,629	0/0:24,0:24:66.22:0,66,923	0/0:33,0:33:96.32:0,96,1342	0/0:31,0:31:90.27:0,90,1239	0/0:25,0:25:75.25:0,75,1048	0/0:20,0:20:57.19:0,57,794	0/0:30,0:30:90.24:0,90,1216	0/0:21,0:21:63.17:0,63,841	0/0:26,0:26:78.25:0,78,1075	0/0:36,0:36:99:0,108,1509	0/0:11,0:11:30.07:0,30,384
chr10	44482529	.	TTGTG	T	1412.18	PASS	AB=0.666;AC=2;AF=0.036;AN=56;BaseQRankSum=7.100;DP=895;FS=0.680;HRun=0;HaplotypeScore=148.7019;InbreedingCoeff=-0.0370;MQ=73.66;MQ0=0;MQRankSum=-3.225;QD=15.87;ReadPosRankSum=4.918;VQSLOD=3.3202;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,111,2853	0/1:6,12:18:99:496,0,126	0/0:35,0:33:99:0,99,2145	0/0:36,0:36:89.92:0,90,1964	0/0:20,0:20:57.16:0,57,1368	0/0:37,0:37:99:0,105,2545	0/0:28,0:28:78.25:0,78,1953	0/0:39,0:39:99:0,114,2667	0/0:30,0:30:90.26:0,90,2184	0/0:30,0:30:87.30:0,87,2296	0/0:29,0:29:87.28:0,87,2230	0/0:42,0:42:99:0,117,2875	0/0:35,0:35:99:0,105,2448	0/0:35,0:35:99:0,99,2563	0/0:41,0:41:99:0,114,2976	0/0:32,0:32:96.30:0,96,2425	0/1:45,26:71:99:1005,0,2779	0/0:26,0:26:66.15:0,66,1595	0/0:22,0:22:60.18:0,60,1504	0/0:28,0:28:72.20:0,72,1709	0/0:30,0:30:84.26:0,84,2119	0/0:25,0:25:69.19:0,69,1676	0/0:28,0:28:81.24:0,81,2018	0/0:33,0:33:96.22:0,96,2312	0/0:15,0:15:42.13:0,42,1071	0/0:32,0:32:93.30:0,93,2386	0/0:41,0:41:99:0,114,2990	0/0:18,0:18:51.16:0,51,1293
chr10	44482668	.	GCAA	G	2123.71	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.866;DP=663;FS=1.963;HRun=0;HaplotypeScore=140.4982;InbreedingCoeff=0.9994;MQ=69.81;MQ0=1;MQRankSum=-2.542;QD=37.26;ReadPosRankSum=3.290;VQSLOD=4.1751;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,132,2795	1/1:1,20:21:48.16:797,48,0	0/0:22,0:19:54.02:0,54,1001	0/0:17,0:16:48.15:0,48,883	0/0:18,0:18:51.18:0,51,1135	0/0:35,0:35:99:0,105,2296	0/0:25,0:25:75.24:0,75,1605	0/0:31,0:31:87.30:0,87,1948	0/0:25,0:25:66.21:0,66,1420	0/0:20,0:20:60.21:0,60,1338	0/0:15,0:15:45.11:0,45,958	0/0:21,0:21:60.21:0,60,1342	0/0:25,0:25:75.26:0,75,1631	0/0:23,0:23:66.21:0,66,1432	0/0:31,0:31:87.30:0,87,1924	0/0:24,0:24:72.25:0,72,1590	1/1:0,36:36:87.30:1448,87,0	0/0:15,0:15:42.14:0,42,903	0/0:28,0:28:75.26:0,75,1643	0/0:25,0:25:72.25:0,72,1601	0/0:21,0:21:63.22:0,63,1405	0/0:21,0:21:63.22:0,63,1406	0/0:20,0:20:60.21:0,60,1337	0/0:25,0:25:69.24:0,69,1519	0/0:21,0:21:63.22:0,63,1407	0/0:23,0:23:69.22:0,69,1500	0/0:20,0:20:60.21:0,60,1341	0/0:9,0:9:27.09:0,27,602
chr10	44483019	.	C	CG	963.57	PASS	AB=0.676;AC=2;AF=0.036;AN=56;BaseQRankSum=9.241;DP=703;FS=0.000;HRun=4;HaplotypeScore=83.1177;InbreedingCoeff=-0.0382;MQ=89.27;MQ0=0;MQRankSum=-5.356;QD=13.20;ReadPosRankSum=2.872;VQSLOD=1.9950;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:84.23:0,84,952	0/1:11,10:21:99:311,0,283	0/0:36,0:36:90.19:0,90,990	0/0:25,0:25:51.14:0,51,528	0/0:22,0:22:66.17:0,66,738	0/0:20,0:20:57.16:0,57,646	0/0:33,0:33:81.23:0,81,918	0/0:29,0:29:69.16:0,69,769	0/0:29,0:29:84.22:0,84,941	0/0:30,0:30:75.21:0,75,849	0/0:10,0:10:27.08:0,27,306	0/0:23,0:23:63.14:0,63,700	0/0:17,0:17:48.14:0,48,544	0/0:26,0:26:72.20:0,72,815	0/0:21,0:21:54.15:0,54,612	0/0:19,0:19:54.15:0,54,612	0/1:27,25:52:99:742,0,678	0/0:26,1:27:31.42:0,31,740	0/0:25,0:25:66.17:0,66,736	0/0:16,0:16:48.12:0,48,535	0/0:38,0:38:99:0,99,1122	0/0:21,0:21:57.16:0,57,646	0/0:13,0:13:33.09:0,33,374	0/0:47,0:47:99:0,132,1496	0/0:18,0:18:45.11:0,45,502	0/0:24,0:24:45.12:0,45,510	0/0:18,0:18:51.14:0,51,578	0/0:6,0:6:12.03:0,12,136
chr10	44483187	.	AG	A	1552.62	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=10.901;DP=723;FS=0.568;HRun=3;HaplotypeScore=76.2589;InbreedingCoeff=0.9697;MQ=80.37;MQ0=0;MQRankSum=-2.573;QD=30.44;ReadPosRankSum=2.216;VQSLOD=3.5187;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,132,1865	1/1:0,9:9:24.08:297,24,0	0/0:20,0:20:57.19:0,57,821	0/0:15,0:15:42.10:0,42,568	0/0:31,0:31:90.27:0,90,1256	0/0:21,0:21:60.17:0,60,813	0/0:28,0:28:81.26:0,81,1147	0/0:26,0:26:75.20:0,75,995	0/0:28,0:28:78.25:0,78,1105	0/0:21,0:21:57.18:0,57,805	0/0:23,0:23:60.19:0,60,838	0/0:34,0:34:99:0,99,1387	0/0:39,0:39:99:0,114,1585	0/0:19,0:19:57.19:0,57,820	0/0:27,0:27:78.26:0,78,1122	0/0:23,0:23:69.23:0,69,994	1/1:3,39:42:99:1376,111,0	0/0:26,0:26:75.25:0,75,1080	0/0:29,0:29:87.29:0,87,1250	0/0:19,0:19:41.98:0,42,585	0/0:55,0:55:99:0,157,2228	0/0:17,0:17:51.17:0,51,734	0/0:20,0:20:54.17:0,54,760	0/0:40,0:40:99:0,120,1711	0/0:16,0:16:48.16:0,48,691	0/0:23,0:23:66.13:0,66,915	0/0:23,0:23:63.21:0,63,896	0/0:3,0:3:9.03:0,9,130
chr10	44483642	.	GTA	G	43.43	PASS	AB=0.947;AC=5;AF=0.089;AN=56;BaseQRankSum=4.412;DP=714;FS=8.198;HRun=0;HaplotypeScore=142.0615;InbreedingCoeff=0.5757;MQ=55.35;MQ0=6;MQRankSum=-3.254;QD=1.40;ReadPosRankSum=-2.788;VQSLOD=1.2110;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:27.09:0,27,516	1/1:7,1:8:0.57:1,1,0	0/0:33,0:18:30.59:0,31,653	0/0:60,0:41:88.77:0,89,1492	0/0:25,0:25:54.19:0,54,1020	0/0:33,0:33:96.33:0,96,1777	0/0:20,0:20:57.16:0,57,1002	0/1:17,1:18:52.17:52,0,268	0/0:19,0:19:54.17:0,54,1007	0/0:29,0:29:87.28:0,87,1619	0/0:17,0:17:45.12:0,45,802	0/0:34,0:34:87.24:0,87,1547	0/0:21,0:21:57.17:0,57,1066	0/0:30,0:30:71.98:0,72,1357	0/0:26,0:26:72.25:0,72,1359	0/0:33,0:33:92.80:0,93,1755	1/1:3,2:5:6.02:85,6,0	0/0:33,0:33:87.38:0,87,1666	0/0:11,0:11:30.10:0,30,550	0/0:16,0:16:29.81:0,30,573	0/0:40,0:40:39.03:0,39,741	0/0:35,0:35:81.17:0,81,1418	0/0:21,0:21:54.06:0,54,963	0/0:31,0:31:72.23:0,72,1326	0/0:17,0:17:50.99:0,51,887	0/0:23,0:23:66.23:0,66,1212	0/0:22,0:21:54.18:0,54,969	0/0:20,0:20:57.20:0,57,1079
chr10	44483646	.	GTACA	G	51.91	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=4.929;DP=717;FS=18.330;HRun=0;HaplotypeScore=166.6767;InbreedingCoeff=0.8869;MQ=54.19;MQ0=11;MQRankSum=-3.434;QD=3.99;ReadPosRankSum=-0.970;VQSLOD=0.9782;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:32:27.02:0,27,426	1/1:2,3:8:8.01:110,8,0	0/0:41,0:18:42.48:0,42,836	0/0:59,0:39:99:0,105,2033	0/0:23,0:23:51.04:0,51,782	0/0:35,0:35:99:0,102,2339	0/0:20,0:20:57.11:0,57,1224	0/0:17,0:16:22.39:0,22,592	0/0:18,0:18:51.05:0,51,1132	0/0:29,0:29:87.28:0,87,2247	0/0:15,0:15:45.13:0,45,1121	0/0:32,0:32:81.22:0,81,2034	0/0:23,0:23:59.62:0,60,1271	0/0:28,0:28:68.90:0,69,1638	0/0:28,0:28:72.13:0,72,1533	0/0:38,0:38:99:0,111,2368	1/1:3,1:5:5.05:43,5,0	0/0:29,0:30:90.05:0,90,2076	0/0:11,0:11:33.06:0,33,585	0/0:15,0:16:29.76:0,30,395	0/0:39,0:40:41.93:0,42,696	0/0:32,0:32:72.22:0,72,1933	0/0:25,0:25:63.10:0,63,1208	0/0:31,0:31:72.07:0,72,1543	0/0:18,0:18:54.15:0,54,1348	0/0:22,0:22:66.18:0,66,1251	0/0:21,0:21:55.65:0,56,904	0/0:19,0:19:57.15:0,57,1177
chr10	44483647	.	T	TACAC	4904.08	PASS	AB=0.836;AC=18;AF=0.321;AN=56;BaseQRankSum=0.363;DP=754;FS=3.395;HRun=0;HaplotypeScore=168.7436;InbreedingCoeff=0.7653;MQ=53.10;MQ0=12;MQRankSum=-2.621;QD=20.26;ReadPosRankSum=1.604;VQSLOD=4.3659;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:26,12:39:18.95:375,19,0	0/0:8,0:8:11.22:0,11,64	0/0:41,0:18:15.05:0,15,242	0/0:58,0:38:54.15:0,54,838	1/1:16,11:28:26.62:600,27,0	0/0:32,0:35:84.27:0,84,1329	0/0:20,0:21:42.14:0,42,677	0/1:23,0:21:10.81:204,0,11	0/0:17,0:17:33.11:0,33,550	0/0:30,0:30:72.24:0,72,1174	0/0:15,0:15:39.13:0,39,649	0/0:33,0:34:60.20:0,60,999	0/0:22,0:23:37.50:0,38,579	0/0:27,0:28:48.16:0,48,799	0/0:26,0:27:51.11:0,51,802	0/0:35,0:38:81.23:0,81,1246	1/1:5,0:5:2.74:34,3,0	0/0:28,0:30:12.23:0,12,988	1/1:9,5:14:16.43:519,16,0	1/1:8,7:16:11.56:174,12,0	0/1:22,20:42:26.85:422,0,27	0/0:31,0:32:60.18:0,60,974	0/0:25,0:26:42.11:0,42,627	0/0:29,0:31:51.06:0,51,810	0/0:17,0:18:48.13:0,48,726	1/1:19,9:29:3.79:958,4,0	1/1:15,6:22:35.79:708,36,0	1/1:14,7:22:44.94:911,45,0
chr10	44483666	.	ATGTATG	A	1235.52	PASS	AB=0.908;AC=7;AF=0.125;AN=56;BaseQRankSum=4.346;DP=771;FS=6.498;HRun=0;HaplotypeScore=209.0440;InbreedingCoeff=-0.1448;MQ=49.59;MQ0=16;MQRankSum=-4.787;QD=8.64;ReadPosRankSum=-2.880;VQSLOD=1.5101;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,14:38:19:0,19,275	0/0:9,1:10:17.97:0,18,200	0/0:39,0:11:24.05:0,24,608	0/0:56,0:26:67.53:0,68,1618	0/1:24,0:24:16.78:17,0,287	0/0:34,0:35:99:0,102,3725	0/0:24,0:24:63.22:0,63,2075	0/1:17,10:23:99:750,0,763	0/0:17,1:18:48.16:0,48,1778	0/0:36,0:36:99:0,108,3717	0/0:18,0:18:54.19:0,54,1992	0/0:35,0:35:87.09:0,87,2542	0/0:27,0:27:71.75:0,72,1926	0/0:26,0:26:62.99:0,63,1957	0/0:27,0:27:69.22:0,69,2459	0/0:37,0:37:99:0,105,3752	0/1:7,2:9:47.53:71,0,48	0/0:34,1:35:17.90:0,18,3013	0/0:19,0:16:1.60:0,2,888	0/1:18,0:18:2.24:2,0,251	0/0:26,6:31:16.77:0,17,273	0/0:39,0:39:90.77:0,91,2652	0/0:21,0:21:48.16:0,48,1459	0/0:33,0:33:69.24:0,69,1972	0/0:21,0:21:63.22:0,63,2299	0/1:24,3:28:99:247,0,632	0/1:18,0:17:99:181,0,444	0/1:17,1:19:90.95:91,0,330
chr10	44483672	.	G	GCA	4508.91	PASS	AB=0.805;AC=23;AF=0.411;AN=56;BaseQRankSum=-0.198;DP=836;FS=3.501;HRun=0;HaplotypeScore=178.4468;InbreedingCoeff=0.2959;MQ=49.39;MQ0=17;MQRankSum=-0.600;QD=9.41;ReadPosRankSum=-2.218;VQSLOD=4.3028;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:42,0:44:0.13:0,0,17	0/1:9,0:10:2.82:27,0,3	0/0:43,0:13:8.17:0,8,122	0/0:60,0:26:5.07:0,5,68	0/1:13,1:27:0:0,0,0	0/0:36,1:37:36.95:0,37,864	0/0:19,0:23:50.46:0,50,498	0/1:34,0:30:18.42:20,0,18	0/0:21,0:22:48.14:0,48,559	0/0:32,0:35:74.45:0,74,785	0/0:17,0:18:38.95:0,39,434	1/1:10,26:37:25.26:859,25,0	0/1:6,21:27:76.62:736,0,77	1/1:12,18:31:1.12:480,1,0	0/0:27,0:27:54.16:0,54,630	0/0:34,0:37:92.93:0,93,1032	0/1:9,0:9:3.64:22,0,4	0/0:33,0:33:24.52:0,25,629	0/1:22,0:25:55.44:95,0,55	1/1:9,0:25:13.24:58,13,0	0/1:34,0:33:0.49:11,0,0	0/1:14,24:38:50.83:651,0,51	0/1:10,13:23:99:417,0,162	0/1:13,21:34:44.72:517,0,45	0/0:21,0:21:45.13:0,45,525	1/1:14,0:34:50.94:377,51,0	1/1:9,1:19:17.69:122,18,0	1/1:12,0:23:13.31:117,13,0
chr10	44483696	.	ATG	A	557.02	PASS	AB=0.790;AC=5;AF=0.089;AN=56;BaseQRankSum=7.125;DP=818;FS=17.082;HRun=0;HaplotypeScore=172.7131;InbreedingCoeff=-0.0448;MQ=56.66;MQ0=7;MQRankSum=-8.222;QD=5.86;ReadPosRankSum=-2.007;VQSLOD=1.8665;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,8:40:37.85:0,38,618	0/1:6,4:12:6.93:135,0,7	0/0:28,0:13:36.94:0,37,608	0/0:46,0:22:31.43:0,31,654	0/0:26,3:30:39.13:0,39,615	0/0:37,1:38:99:0,105,1968	0/0:29,0:29:80.81:0,81,1318	0/1:15,2:24:99:344,0,105	0/0:26,0:27:75.25:0,75,1375	0/0:44,0:43:99:0,108,2119	0/0:17,0:17:50.66:0,51,930	0/0:38,0:38:90.01:0,90,1142	0/0:37,0:37:99:0,99,1334	0/0:29,0:29:62.85:0,63,859	0/0:30,0:30:81.28:0,81,1537	0/0:39,0:39:99:0,114,2082	0/0:5,0:5:5.48:0,5,31	0/0:29,0:29:7.28:0,7,1341	0/1:15,4:19:85.35:85,0,484	0/0:24,4:27:34.62:0,35,420	0/0:26,0:26:33.08:0,33,523	0/0:36,0:36:74.92:0,75,1026	0/0:31,0:32:34.96:0,35,1117	0/0:29,0:29:18.23:0,18,723	0/0:27,0:27:81.28:0,81,1519	0/0:35,1:37:11.96:0,12,1385	0/1:21,2:23:42.69:43,0,607	0/1:12,3:15:67:67,0,209
chr10	44483917	.	AG	A	1215.78	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=9.531;DP=696;FS=0.662;HRun=2;HaplotypeScore=75.7008;InbreedingCoeff=0.9893;MQ=92.88;MQ0=0;MQRankSum=-6.627;QD=33.77;ReadPosRankSum=-4.220;VQSLOD=2.1854;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,138,2048	0/0:6,0:6:18.06:0,18,269	0/0:31,0:31:90.30:0,90,1310	0/0:30,0:30:81.27:0,81,1205	0/0:37,0:37:99:0,102,1525	0/0:31,0:31:93.31:0,93,1376	0/0:22,0:22:66.22:0,66,989	1/1:2,34:36:99:1311,102,0	0/0:20,0:20:54.18:0,54,809	0/0:32,0:32:96.33:0,96,1438	0/0:22,0:22:66.22:0,66,986	0/0:25,0:25:72.24:0,72,1076	0/0:31,0:31:90.30:0,90,1347	0/0:24,0:24:69.23:0,69,1033	0/0:29,0:29:87.28:0,87,1266	0/0:21,0:21:63.18:0,63,887	0/0:8,0:8:24.04:0,24,334	0/0:11,0:11:33.11:0,33,494	0/0:11,0:11:30.10:0,30,448	0/0:21,0:21:63.21:0,63,941	0/0:30,0:30:90.30:0,90,1346	0/0:33,0:33:96.33:0,96,1439	0/0:19,0:19:57.19:0,57,854	0/0:15,0:15:45.15:0,45,674	0/0:15,0:15:45.13:0,45,634	0/0:32,0:32:96.31:0,96,1403	0/0:35,0:34:96.26:0,96,1352	0/0:22,0:22:66.21:0,66,969
chr10	44484305	.	T	TAGTAAAATGATGTTGACCAGACCTG	31867.77	PASS	AB=0.700;AC=53;AF=0.981;AN=54;BaseQRankSum=0.123;DP=229;FS=11.461;HRun=0;HaplotypeScore=286.5707;InbreedingCoeff=-0.0352;MQ=65.80;MQ0=0;MQRankSum=-1.637;QD=139.16;ReadPosRankSum=1.581;VQSLOD=3.3113;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:12,0:12:27.09:1853,27,0	1/1:3,0:3:8.24:226,8,0	1/1:3,1:6:15.05:792,15,0	0/1:4,0:7:17.38:435,0,17	1/1:9,0:9:18.06:1001,18,0	1/1:5,0:5:6.02:400,6,0	1/1:8,0:8:24.08:1341,24,0	1/1:13,0:13:27.09:1622,27,0	1/1:11,0:11:26.45:1767,26,0	1/1:11,0:11:27.09:1650,27,0	1/1:9,0:9:18.05:881,18,0	1/1:7,0:7:18.06:1273,18,0	1/1:8,0:8:19.88:1517,20,0	1/1:4,0:4:12.04:437,12,0	1/1:14,0:14:32.32:1950,32,0	1/1:14,0:14:36.12:2601,36,0	1/1:9,0:9:27.09:1891,27,0	./.	1/1:7,0:6:15.49:609,15,0	1/1:12,0:12:21.04:1241,21,0	1/1:5,0:5:11.96:376,12,0	1/1:11,0:11:27.09:1759,27,0	1/1:10,0:10:24.07:1597,24,0	1/1:5,0:5:9.03:607,9,0	1/1:13,0:13:30.09:2076,30,0	1/1:4,0:4:9.03:649,9,0	1/1:7,0:7:19.86:1024,20,0	1/1:5,0:5:15.02:296,15,0
chr10	44485896	.	C	CAAGAGGGAGAAGT	2160.99	PASS	AC=4;AF=0.077;AN=52;BaseQRankSum=3.558;DP=237;FS=4.297;HRun=0;HaplotypeScore=92.5586;InbreedingCoeff=0.7337;MQ=64.37;MQ0=3;MQRankSum=-5.406;QD=113.74;ReadPosRankSum=-1.595;VQSLOD=3.1211;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:8:24.08:0,24,816	1/1:2,2:4:8.96:404,9,0	0/0:12,0:7:12.04:0,12,364	0/0:21,0:16:42.09:0,42,1205	0/0:1,0:1:3.01:0,3,100	0/0:4,0:4:12.04:0,12,457	0/0:8,0:8:24.07:0,24,781	0/0:18,0:18:48.16:0,48,1643	0/0:12,0:12:36.12:0,36,1209	0/0:7,0:7:21.06:0,21,659	0/0:3,0:3:6.02:0,6,231	0/0:13,0:13:36.11:0,36,1243	0/0:6,0:6:18.06:0,18,692	0/0:6,0:6:18.06:0,18,652	0/0:5,0:5:15.05:0,15,577	0/0:7,0:7:21.07:0,21,808	1/1:13,2:15:39.04:1870,39,0	0/0:8,0:8:24.08:0,24,857	0/0:12,0:10:18.06:0,18,606	./.	0/0:16,0:16:42.11:0,42,1430	0/0:2,0:2:6.02:0,6,191	0/0:5,0:5:12.04:0,12,462	0/0:23,0:23:69.24:0,69,2490	0/0:7,0:7:21.06:0,21,672	0/0:4,0:4:12.04:0,12,462	0/0:9,0:9:24.08:0,24,916	./.
chr10	44485997	.	G	GT	531.16	PASS	AB=0.670;AC=2;AF=0.038;AN=52;BaseQRankSum=5.887;DP=366;FS=0.907;HRun=1;HaplotypeScore=65.6511;InbreedingCoeff=-0.0536;MQ=62.51;MQ0=0;MQRankSum=-3.642;QD=10.62;ReadPosRankSum=0.259;VQSLOD=1.4514;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:63.19:0,63,801	0/1:2,8:10:47.67:323,0,48	0/0:19,0:16:36.39:0,36,525	0/0:23,0:23:56.70:0,57,736	./.	0/0:13,0:13:36.10:0,36,452	0/0:21,0:21:60.15:0,60,759	0/0:19,0:19:48.16:0,48,622	0/0:8,0:8:24.04:0,24,280	0/0:6,0:6:15.05:0,15,195	0/0:6,0:6:18.05:0,18,220	0/0:9,0:9:24.08:0,24,311	0/0:17,0:17:51.04:0,51,611	0/0:7,0:7:14.96:0,15,172	0/0:12,0:12:27.08:0,27,337	0/0:14,0:14:39.13:0,39,505	0/1:29,11:40:99:296,0,847	0/0:15,0:15:45.11:0,45,564	0/0:8,0:7:17.97:0,18,233	0/0:1,0:1:2.97:0,3,20	0/0:39,0:39:99:0,108,1384	0/0:8,0:8:21.06:0,21,260	0/0:4,0:4:12.03:0,12,143	0/0:25,0:25:63.09:0,63,776	0/0:11,0:11:30.05:0,30,369	0/0:6,0:6:15.03:0,15,174	./.	0/0:1,0:1:3.01:0,3,39
chr10	44486089	.	AAT	A	61.30	PASS	AB=0.963;AC=5;AF=0.089;AN=56;BaseQRankSum=-4.123;DP=425;FS=8.027;HRun=0;HaplotypeScore=176.7968;InbreedingCoeff=0.3046;MQ=68.44;MQ0=0;MQRankSum=-0.404;QD=1.46;ReadPosRankSum=-5.747;VQSLOD=-0.2061;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:5,0:5:22.79:23,0,23	0/0:12,0:12:25.66:0,26,135	0/0:11,0:11:19.60:0,20,100	0/1:16,0:15:32.51:55,0,33	1/1:12,1:13:10.81:91,11,0	0/0:13,0:13:31.89:0,32,128	0/0:19,0:19:38.45:0,38,158	0/0:19,0:19:26.33:0,26,144	0/0:21,0:21:51.64:0,52,217	0/0:19,1:20:9.90:0,10,145	0/0:15,0:15:33.81:0,34,155	0/0:22,1:23:31.27:0,31,202	0/0:13,0:13:32.46:0,32,166	0/0:18,0:18:41.85:0,42,178	0/0:22,0:22:44.29:0,44,217	0/0:25,0:25:58.57:0,59,223	0/0:28,0:28:69.90:0,70,327	0/0:20,0:20:50.46:0,50,211	0/0:7,0:7:14.37:0,14,80	0/0:16,0:16:32.38:0,32,201	0/0:7,0:7:10.68:0,11,65	0/0:8,0:8:17.74:0,18,64	0/0:14,0:14:33.78:0,34,135	0/0:22,0:21:47.36:0,47,251	0/0:19,0:19:32.11:0,32,127	0/0:7,0:7:20.80:0,21,143	0/1:7,1:8:3.38:3,0,84	0/0:4,0:4:4.36:0,4,15
chr10	44486178	.	GC	G	467.37	PASS	AB=0.957;AC=7;AF=0.125;AN=56;BaseQRankSum=0.429;DP=409;FS=6.876;HRun=9;HaplotypeScore=125.9784;InbreedingCoeff=0.7361;MQ=73.85;MQ0=7;MQRankSum=1.373;QD=6.15;ReadPosRankSum=-1.404;VQSLOD=0.8724;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:38.32:0,38,281	1/1:1,2:3:6:55,6,0	0/1:42,2:26:24.53:25,0,230	0/0:45,0:20:4.33:0,4,175	0/0:11,0:11:32.78:0,33,239	0/0:18,0:18:48.09:0,48,513	0/0:23,0:24:62.93:0,63,653	1/1:6,6:12:29.97:260,30,0	0/0:9,0:9:23.15:0,23,199	0/0:12,0:12:26.13:0,26,158	0/0:6,0:6:17.08:0,17,85	0/0:9,0:9:14.42:0,14,84	0/0:11,0:12:30.21:0,30,158	0/0:10,0:10:17.44:0,17,107	0/0:12,0:12:22.90:0,23,140	0/0:14,0:14:34.18:0,34,176	1/1:10,7:17:36.54:269,37,0	0/0:12,0:12:20.40:0,20,127	0/0:13,0:13:21.64:0,22,201	0/0:12,0:12:29.86:0,30,232	0/0:13,0:13:17.84:0,18,124	0/0:7,0:7:14.24:0,14,72	0/0:9,0:10:24.49:0,24,127	0/0:16,0:16:25.80:0,26,141	0/0:11,0:12:22.90:0,23,122	0/0:11,0:11:26.87:0,27,211	0/0:15,0:15:32.77:0,33,241	0/0:7,0:7:14.95:0,15,121
chr10	44486187	.	C	CCA	6738.22	PASS	AB=0.686;AC=35;AF=0.625;AN=56;BaseQRankSum=-1.521;DP=494;FS=6.758;HRun=0;HaplotypeScore=133.8056;InbreedingCoeff=0.5622;MQ=69.53;MQ0=19;MQRankSum=-2.923;QD=24.68;ReadPosRankSum=0.711;VQSLOD=5.2328;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:9,0:19:3.98:287,0,4	0/0:3,0:3:8.87:0,9,60	0/0:66,0:30:39.78:0,40,478	0/0:64,0:24:23.47:0,23,242	0/1:5,0:13:0.32:185,0,0	0/0:23,0:23:45.16:0,45,648	0/0:23,0:23:55.80:0,56,733	0/0:15,0:15:39.59:0,40,247	0/1:11,0:11:11.75:12,0,153	1/1:10,5:15:35.06:438,35,0	1/1:4,5:9:24.02:355,24,0	1/1:7,3:12:32.35:345,32,0	1/1:7,8:15:42.06:609,42,0	1/1:9,3:12:32.85:344,33,0	1/1:11,3:15:38.16:373,38,0	1/1:5,9:16:46.29:661,46,0	0/0:22,0:22:49.25:0,49,306	1/1:14,4:18:30.04:453,30,0	0/1:5,0:13:7.69:201,0,8	1/1:3,0:11:17.19:224,17,0	0/1:6,0:11:31.32:31,0,58	1/1:3,4:7:21.04:314,21,0	1/1:6,3:10:27.04:353,27,0	1/1:10,6:18:47.12:536,47,0	1/1:5,7:12:33.03:473,33,0	0/1:5,0:12:1.03:156,0,1	1/1:3,0:16:22.09:295,22,0	0/1:3,0:6:6.36:92,0,6
chr10	44486741	.	GA	G	2142.13	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=12.361;DP=763;FS=3.129;HRun=1;HaplotypeScore=84.7314;InbreedingCoeff=0.9989;MQ=88.79;MQ0=0;MQRankSum=-3.217;QD=36.31;ReadPosRankSum=1.785;VQSLOD=4.0822;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,132,2083	1/1:0,15:15:39.13:545,39,0	0/0:33,0:33:82.59:0,83,1406	0/0:22,0:22:63.17:0,63,962	0/0:30,0:30:84.26:0,84,1295	0/0:20,0:20:60.19:0,60,936	0/0:32,0:32:93.32:0,93,1482	0/0:40,0:40:99:0,120,1899	0/0:22,0:22:66.23:0,66,1055	0/0:31,0:31:93.30:0,93,1447	0/0:17,0:17:51.17:0,51,809	0/0:21,0:21:63.20:0,63,984	0/0:19,0:19:57.18:0,57,885	0/0:22,0:22:66.23:0,66,1055	0/0:33,0:33:99:0,99,1582	0/0:39,0:39:99:0,117,1820	1/1:0,44:44:99:1719,123,0	0/0:22,0:22:61.91:0,62,1001	0/0:22,0:22:63.16:0,63,898	0/0:25,0:25:75.26:0,75,1199	0/0:44,0:44:99:0,126,1985	0/0:21,0:21:63.20:0,63,981	0/0:19,0:19:57.19:0,57,909	0/0:39,0:39:99:0,114,1735	0/0:19,0:19:57.17:0,57,886	0/0:26,0:26:78.27:0,78,1246	0/0:33,0:33:99:0,99,1580	0/0:8,0:8:24.08:0,24,384
chr10	44487003	.	TAC	T	113.49	PASS	AB=0.816;AC=2;AF=0.036;AN=56;BaseQRankSum=4.949;DP=628;FS=2.666;HRun=0;HaplotypeScore=82.4303;InbreedingCoeff=-0.0442;MQ=95.45;MQ0=0;MQRankSum=-3.532;QD=2.70;ReadPosRankSum=-0.080;VQSLOD=1.2355;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,99,1585	0/1:11,6:17:99:144,0,415	0/0:32,1:32:44.84:0,45,1338	0/0:29,0:29:69.23:0,69,1143	0/0:20,0:20:54.18:0,54,919	0/0:22,0:22:66.20:0,66,1092	0/0:22,0:22:57.18:0,57,946	0/0:40,0:40:99:0,105,1702	0/0:16,0:16:48.16:0,48,823	0/0:21,0:21:54.18:0,54,915	0/0:8,0:8:21.07:0,21,358	0/0:25,0:25:63.20:0,63,1022	0/0:24,0:24:63.18:0,63,1020	0/0:20,0:20:54.18:0,54,921	0/0:10,0:10:27.09:0,27,463	0/0:26,0:26:72.23:0,72,1207	0/1:22,3:25:57.96:58,0,814	0/0:15,1:16:2.68:0,3,598	0/0:26,0:26:57.17:0,57,918	0/0:19,0:19:57.20:0,57,974	0/0:28,0:28:75.21:0,75,1204	0/0:18,0:18:54.17:0,54,898	0/0:15,0:15:39.13:0,39,666	0/0:23,0:23:66.23:0,66,1126	0/0:22,0:22:57.18:0,57,951	0/0:36,0:36:99:0,102,1699	0/0:22,0:22:63.18:0,63,1025	0/0:7,0:7:21.07:0,21,345
chr10	44487227	.	A	AT	623.10	PASS	AB=0.684;AC=2;AF=0.036;AN=56;BaseQRankSum=4.477;DP=679;FS=2.760;HRun=4;HaplotypeScore=117.7359;InbreedingCoeff=-0.0381;MQ=83.07;MQ0=0;MQRankSum=-5.885;QD=12.22;ReadPosRankSum=-1.208;VQSLOD=1.5507;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,102,1147	0/1:13,9:22:99:273,0,286	0/0:17,0:17:35.68:0,36,378	0/0:25,0:24:52.04:0,52,623	0/0:32,0:32:90.26:0,90,1021	0/0:19,0:19:57.16:0,57,646	0/0:27,0:27:69.19:0,69,783	0/0:28,0:28:78.21:0,78,877	0/0:21,0:21:57.15:0,57,637	0/0:31,0:31:90.22:0,90,1001	0/0:27,0:27:72.21:0,72,816	0/0:26,0:26:75.18:0,75,831	0/0:22,0:22:60.17:0,60,680	0/0:15,0:15:42.12:0,42,476	0/0:20,0:20:57.16:0,57,646	0/0:22,0:21:63.18:0,63,714	0/1:14,15:29:99:439,0,302	0/0:13,0:13:12.17:0,12,349	0/0:27,0:27:60.16:0,60,672	0/0:32,0:32:90.24:0,90,1011	0/0:25,0:25:72.19:0,72,806	0/0:17,0:17:48.14:0,48,544	0/0:29,0:29:78.22:0,78,885	0/0:21,0:21:60.15:0,60,669	0/0:21,0:21:57.12:0,57,632	0/0:25,0:25:66.18:0,66,741	0/0:32,0:32:87.25:0,87,986	0/0:15,0:15:45.13:0,45,510
chr10	44487379	.	TTCTGAGATGCTTG	T	2022.01	PASS	AB=0.735;AC=2;AF=0.036;AN=56;BaseQRankSum=7.418;DP=709;FS=0.000;HRun=0;HaplotypeScore=272.8282;InbreedingCoeff=-0.0378;MQ=78.65;MQ0=1;MQRankSum=-6.711;QD=33.15;ReadPosRankSum=1.870;VQSLOD=2.4591;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:39:99:0,114,6853	0/1:8,6:14:99:677,0,1325	0/0:28,0:28:77.07:0,77,4093	0/0:22,0:21:34.88:0,35,2416	0/0:19,0:19:54.16:0,54,3044	0/0:22,0:22:63.20:0,63,3655	0/0:36,0:36:99:0,99,5922	0/0:26,0:26:75.24:0,75,4417	0/0:21,0:21:63.19:0,63,3632	0/0:29,0:29:84.28:0,84,5134	0/0:7,0:7:21.07:0,21,1255	0/0:31,0:31:87.28:0,87,5169	0/0:28,0:28:78.27:0,78,4138	0/0:31,0:31:90.30:0,90,5470	0/0:28,0:28:84.29:0,84,5183	0/0:22,0:22:63.22:0,63,4095	0/1:33,14:47:99:1434,0,4880	0/0:24,0:24:69.24:0,69,4391	0/0:25,0:25:69.24:0,69,3862	0/0:10,0:10:30.10:0,30,1751	0/0:52,0:52:99:0,151,8959	0/0:19,0:19:57.20:0,57,3203	0/0:17,0:17:48.14:0,48,2813	0/0:47,0:47:99:0,138,8565	0/0:16,0:16:39.13:0,39,2335	0/0:16,0:16:45.15:0,45,2668	0/0:27,0:27:78.27:0,78,4998	0/0:5,0:5:15.05:0,15,989
chr10	44487399	.	TC	T	809.13	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.507;DP=676;FS=0.739;HRun=3;HaplotypeScore=91.8408;InbreedingCoeff=0.9370;MQ=90.95;MQ0=1;MQRankSum=0.181;QD=31.12;ReadPosRankSum=-3.935;VQSLOD=1.8715;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:31:87.29:0,87,1253	0/0:16,0:16:42.10:0,42,577	0/0:34,0:34:93.60:0,94,1277	0/0:31,0:30:65.09:0,65,971	0/0:17,0:17:48.15:0,48,673	0/0:18,0:18:54.18:0,54,778	0/0:34,0:34:93.25:0,93,1263	1/1:0,26:26:75.21:904,75,0	0/0:23,0:23:69.20:0,69,949	0/0:27,0:27:78.23:0,78,1056	0/0:3,0:3:9.03:0,9,130	0/0:34,0:34:99:0,99,1402	0/0:17,0:17:51.14:0,51,695	0/0:26,0:26:72.21:0,72,1000	0/0:27,0:27:78.25:0,78,1105	0/0:25,0:24:75.23:0,75,1044	0/0:45,0:45:99:0,117,1658	0/0:26,0:26:78.26:0,78,1123	0/0:19,0:19:57.16:0,57,794	0/0:13,0:13:39.10:0,39,524	0/0:49,0:49:99:0,141,1987	0/0:18,0:18:48.14:0,48,658	0/0:14,0:14:39.12:0,39,542	0/0:45,0:45:99:0,129,1838	0/0:9,0:9:27.09:0,27,388	0/0:12,0:12:36.12:0,36,519	0/0:30,0:30:87.23:0,87,1179	0/0:6,0:6:18.06:0,18,259
chr10	44487659	.	T	TG	1489.79	PASS	AB=0.929;AC=5;AF=0.089;AN=56;BaseQRankSum=9.775;DP=669;FS=6.717;HRun=6;HaplotypeScore=132.0086;InbreedingCoeff=0.7931;MQ=88.65;MQ0=0;MQRankSum=-2.443;QD=19.86;ReadPosRankSum=1.668;VQSLOD=2.2037;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:81.17:0,81,826	1/1:3,11:14:33.11:414,33,0	0/0:29,0:29:71.91:0,72,695	0/0:22,0:22:18.79:0,19,375	0/0:18,0:18:42.07:0,42,420	0/0:23,0:23:66.13:0,66,666	0/0:23,0:23:60.12:0,60,604	0/0:39,0:39:90.17:0,90,903	0/0:23,0:23:69.12:0,69,693	0/0:29,0:29:66.13:0,66,667	0/0:8,0:8:18.04:0,18,184	0/0:31,0:31:75.14:0,75,758	0/0:15,0:15:36.07:0,36,367	0/0:20,0:20:60.12:0,60,604	0/0:27,0:27:69.12:0,69,695	0/0:29,0:29:84.19:0,84,857	1/1:4,31:35:96.29:1194,96,0	0/1:24,2:25:9.37:9,0,535	0/0:14,0:15:38.10:0,38,366	0/0:24,0:24:50.93:0,51,518	0/0:41,0:41:96.21:0,96,980	0/0:15,0:15:36.07:0,36,367	0/0:21,0:21:57.08:0,57,561	0/0:27,0:27:75.15:0,75,758	0/0:17,0:17:48.11:0,48,489	0/0:31,0:31:84.17:0,84,851	0/0:26,0:25:75.17:0,75,765	0/0:8,0:8:24.05:0,24,245
chr10	44487739	.	GATC	G	1621.42	PASS	AB=0.955;AC=5;AF=0.089;AN=56;BaseQRankSum=7.377;DP=595;FS=0.000;HRun=0;HaplotypeScore=89.1090;InbreedingCoeff=0.8424;MQ=79.54;MQ0=0;MQRankSum=-0.399;QD=24.94;ReadPosRankSum=3.033;VQSLOD=3.1220;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,108,2296	1/1:4,10:14:39.06:540,39,0	0/1:20,1:21:2.53:3,0,489	0/0:8,0:8:14.91:0,15,155	0/0:26,0:26:69.20:0,69,1423	0/0:21,0:21:63.20:0,63,1338	0/0:11,0:11:33.07:0,33,625	0/0:32,0:32:84.28:0,84,1791	0/0:24,0:24:69.22:0,69,1459	0/0:25,0:25:67.10:0,67,1406	0/0:19,0:19:57.20:0,57,1257	0/0:25,0:25:75.24:0,75,1578	0/0:18,0:18:51.18:0,51,1124	0/0:23,0:23:69.21:0,69,1426	0/0:23,0:23:66.20:0,66,1372	0/0:20,0:20:60.19:0,60,1269	1/1:2,28:30:75.26:1202,75,0	0/0:19,0:18:57.15:0,57,1211	0/0:21,0:21:57.16:0,57,1139	0/0:15,0:15:39.13:0,39,860	0/0:21,0:21:60.17:0,60,1234	0/0:18,0:18:54.19:0,54,1184	0/0:26,0:26:72.23:0,72,1528	0/0:18,0:18:54.19:0,54,1191	0/0:24,0:24:72.21:0,72,1449	0/0:30,0:30:84.26:0,84,1722	0/0:17,0:16:51.18:0,51,1117	0/0:9,0:9:27.09:0,27,587
chr10	44487917	.	ACACC	A	546.20	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.550;DP=616;FS=6.794;HRun=0;HaplotypeScore=166.1164;InbreedingCoeff=0.9814;MQ=83.15;MQ0=0;MQRankSum=-7.394;QD=18.83;ReadPosRankSum=0.248;VQSLOD=2.7564;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,154,3067	1/1:5,3:8:20.88:212,21,0	0/0:16,0:16:42.12:0,42,974	0/0:27,0:27:42.02:0,42,1379	0/0:15,0:15:45.15:0,45,954	0/0:27,0:27:81.23:0,81,2050	0/0:34,0:34:99:0,99,2715	0/0:34,0:34:96.25:0,96,2381	0/0:29,0:29:87.26:0,87,2262	0/0:28,0:28:81.27:0,81,2104	0/0:10,0:10:30.10:0,30,822	0/0:28,0:28:84.24:0,84,2211	0/0:21,0:21:60.19:0,60,1541	0/0:31,0:31:93.31:0,93,2481	0/0:21,0:21:60.18:0,60,1503	0/0:19,0:18:57.20:0,57,1556	1/1:11,10:21:44.77:455,45,0	0/0:21,0:21:60.21:0,60,1638	0/0:13,0:13:30.10:0,30,573	0/0:14,0:14:42.14:0,42,869	0/0:38,0:38:99:0,114,2264	0/0:12,0:12:36.12:0,36,959	0/0:11,0:11:33.11:0,33,857	0/0:24,0:24:72.25:0,72,1941	0/0:18,0:18:54.17:0,54,1417	0/0:26,0:26:75.25:0,75,1457	0/0:15,0:15:45.14:0,45,894	0/0:4,0:4:12.04:0,12,251
chr10	44487928	.	TCCCC	T	178.30	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.686;DP=645;FS=4.348;HRun=4;HaplotypeScore=166.0683;InbreedingCoeff=0.9387;MQ=84.13;MQ0=0;MQRankSum=-5.649;QD=13.72;ReadPosRankSum=1.677;VQSLOD=0.0204;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,153,4048	1/1:0,3:3:9.02:88,9,0	0/0:18,0:18:54.18:0,54,1393	0/0:26,0:26:71.85:0,72,1520	0/0:19,0:19:54.19:0,54,1458	0/0:23,0:23:69.24:0,69,2000	0/0:43,0:43:99:0,129,3609	0/0:35,0:35:99:0,102,2808	0/0:28,0:28:84.29:0,84,2377	0/0:27,0:27:78.27:0,78,2137	0/0:12,0:12:36.12:0,36,997	0/0:31,0:31:93.29:0,93,2469	0/0:22,0:22:66.23:0,66,1848	0/0:31,0:31:93.32:0,93,2654	0/0:21,0:21:60.21:0,60,1694	0/0:18,0:17:54.19:0,54,1552	1/1:0,10:10:23.72:203,24,0	0/0:23,0:23:69.24:0,69,1944	0/0:15,0:15:42.14:0,42,1191	0/0:17,0:17:51.18:0,51,1478	0/0:47,0:47:99:0,141,3865	0/0:15,0:15:45.15:0,45,1295	0/0:11,0:11:33.11:0,33,953	0/0:29,0:29:84.29:0,84,2259	0/0:22,0:22:66.23:0,66,1851	0/0:24,0:24:69.24:0,69,1926	0/0:20,0:20:60.21:0,60,1680	0/0:3,0:3:9.03:0,9,261
chr10	44487944	.	ACG	A	167.35	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.646;DP=635;FS=4.186;HRun=0;HaplotypeScore=132.1133;InbreedingCoeff=0.9376;MQ=85.38;MQ0=0;MQRankSum=-4.645;QD=12.87;ReadPosRankSum=1.557;VQSLOD=3.3704;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,141,2693	1/1:0,3:3:9.02:89,9,0	0/0:21,0:21:48.99:0,49,910	0/0:21,0:21:60.09:0,60,1043	0/0:16,0:16:47.95:0,48,922	0/0:17,0:17:51.06:0,51,879	0/0:46,0:46:99:0,138,2687	0/0:32,0:32:89.94:0,90,1696	0/0:25,0:25:75.26:0,75,1501	0/0:22,0:22:63.18:0,63,1139	0/0:12,0:12:33.09:0,33,626	0/0:35,0:35:99:0,105,2031	0/0:22,0:22:66.21:0,66,1283	0/0:33,0:33:99:0,99,2002	0/0:26,0:26:75.24:0,75,1467	0/0:20,0:19:60.21:0,60,1182	1/1:0,10:10:20.97:191,21,0	0/0:20,0:20:60.16:0,60,1115	0/0:15,0:15:45.15:0,45,901	0/0:16,0:16:48.16:0,48,966	0/0:53,0:53:99:0,156,2929	0/0:13,0:13:39.13:0,39,790	0/0:16,0:16:48.11:0,48,850	0/0:24,0:24:72.18:0,72,1377	0/0:18,0:18:54.06:0,54,938	0/0:27,0:27:81.28:0,81,1639	0/0:21,0:21:63.16:0,63,1165	0/0:3,0:3:9.03:0,9,182
chr10	44487950	.	GATC	G	93.10	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.428;DP=637;FS=2.665;HRun=0;HaplotypeScore=145.3619;InbreedingCoeff=0.9501;MQ=85.26;MQ0=0;MQRankSum=-5.367;QD=7.16;ReadPosRankSum=1.907;VQSLOD=2.8197;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,141,3408	1/1:0,3:3:8.95:66,9,0	0/0:18,0:18:48.16:0,48,1103	0/0:24,0:24:72.24:0,72,1612	0/0:16,0:16:45.15:0,45,1109	0/0:16,0:16:48.16:0,48,1155	0/0:43,0:43:99:0,129,3123	0/0:30,0:30:90.31:0,90,2172	0/0:26,0:26:78.27:0,78,1893	0/0:20,0:20:57.20:0,57,1380	0/0:11,0:11:33.11:0,33,813	0/0:35,0:35:99:0,105,2529	0/0:26,0:26:75.26:0,75,1808	0/0:37,0:37:99:0,111,2665	0/0:25,0:25:72.25:0,72,1722	0/0:20,0:19:60.21:0,60,1469	1/1:0,10:10:20.23:139,20,0	0/0:19,0:19:57.20:0,57,1371	0/0:18,0:18:54.19:0,54,1281	0/0:18,0:18:54.18:0,54,1292	0/0:50,0:50:99:0,151,3605	0/0:16,0:16:48.16:0,48,1152	0/0:19,0:19:57.20:0,57,1297	0/0:22,0:22:66.23:0,66,1569	0/0:15,0:15:45.15:0,45,1060	0/0:28,0:28:84.29:0,84,2053	0/0:20,0:20:60.21:0,60,1473	0/0:4,0:4:11.97:0,12,240
chr10	44487958	.	GTGCTA	G	379.35	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.495;DP=662;FS=2.387;HRun=0;HaplotypeScore=177.3847;InbreedingCoeff=0.9602;MQ=86.12;MQ0=0;MQRankSum=-5.215;QD=15.81;ReadPosRankSum=0.386;VQSLOD=3.5499;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,154,4721	1/1:1,3:4:9.03:153,9,0	0/0:18,0:18:47.14:0,47,1268	0/0:26,0:26:74.50:0,75,1946	0/0:16,0:16:48.16:0,48,1563	0/0:18,0:18:54.19:0,54,1705	0/0:46,0:46:99:0,138,4256	0/0:26,0:26:78.27:0,78,2511	0/0:25,0:25:75.26:0,75,2447	0/0:23,0:23:65.96:0,66,2046	0/0:11,0:11:33.11:0,33,1098	0/0:36,0:36:99:0,108,3344	0/0:24,0:24:71.04:0,71,2219	0/0:37,0:37:99:0,111,3347	0/0:24,0:24:69.24:0,69,2197	0/0:22,0:21:66.23:0,66,2096	1/1:10,10:20:25.22:340,25,0	0/0:20,0:20:60.17:0,60,1871	0/0:19,0:19:54.19:0,54,1752	0/0:20,0:20:60.21:0,60,1862	0/0:50,0:50:99:0,151,4737	0/0:16,0:16:48.16:0,48,1588	0/0:17,0:17:51.18:0,51,1638	0/0:21,0:21:63.22:0,63,2070	0/0:15,0:15:45.14:0,45,1422	0/0:31,0:31:93.32:0,93,2935	0/0:21,0:21:63.22:0,63,2045	0/0:5,0:5:15.05:0,15,396
chr10	44488125	.	AC	A	503.59	PASS	AB=0.693;AC=2;AF=0.036;AN=56;BaseQRankSum=6.856;DP=738;FS=1.767;HRun=3;HaplotypeScore=91.9822;InbreedingCoeff=-0.0372;MQ=80.30;MQ0=0;MQRankSum=-5.220;QD=9.33;ReadPosRankSum=0.296;VQSLOD=1.1576;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,123,1768	0/1:7,9:16:99:252,0,257	0/0:18,0:18:48.73:0,49,622	0/0:20,0:20:37.34:0,37,567	0/0:35,0:35:99:0,102,1410	0/0:23,0:23:66.21:0,66,933	0/0:39,0:39:99:0,114,1603	0/0:23,0:23:69.23:0,69,991	0/0:29,0:29:87.29:0,87,1253	0/0:23,0:23:69.09:0,69,951	0/0:22,0:22:66.20:0,66,930	0/0:31,0:31:93.30:0,93,1319	0/0:27,0:27:81.27:0,81,1166	0/0:25,0:25:72.24:0,72,1036	0/0:34,0:34:99:0,99,1409	0/0:26,0:26:72.24:0,72,1037	0/1:25,13:38:99:341,0,888	0/0:20,0:20:57.19:0,57,821	0/0:25,0:25:72.24:0,72,1035	0/0:29,0:29:84.28:0,84,1209	0/0:29,0:29:84.27:0,84,1189	0/0:21,0:21:60.19:0,60,846	0/0:24,0:24:69.23:0,69,993	0/0:38,0:38:99:0,108,1520	0/0:21,0:21:63.20:0,63,891	0/0:34,0:34:99:0,102,1449	0/0:19,0:18:57.19:0,57,821	0/0:7,0:7:21.07:0,21,299
chr10	44488668	.	GTTGT	G	1381.30	PASS	AB=0.770;AC=4;AF=0.071;AN=56;BaseQRankSum=8.892;DP=592;FS=2.220;HRun=0;HaplotypeScore=101.0296;InbreedingCoeff=-0.0592;MQ=67.45;MQ0=2;MQRankSum=2.080;QD=16.06;ReadPosRankSum=1.530;VQSLOD=3.3278;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:17,1:18:7.96:8,0,811	0/1:3,8:14:95.17:361,0,95	0/0:29,0:20:30.10:0,30,680	0/0:24,0:21:11.43:0,11,333	0/0:38,0:38:84.29:0,84,1982	0/0:23,0:23:24.53:0,25,1201	0/0:16,0:16:36.11:0,36,804	0/0:35,0:35:57.18:0,57,1241	0/0:18,0:18:45.15:0,45,1034	0/0:21,0:21:36.12:0,36,881	0/1:16,1:17:7.15:7,0,766	0/0:15,0:15:36.12:0,36,872	0/0:15,0:15:36.12:0,36,852	0/0:12,0:12:33.09:0,33,713	0/0:14,0:14:42.14:0,42,994	0/0:13,0:13:36.12:0,36,880	0/1:5,30:37:13.79:1105,0,14	0/0:31,0:31:72.24:0,72,1608	0/0:24,0:23:33.10:0,33,656	0/0:21,0:21:45.15:0,45,1066	0/0:5,0:5:3.01:0,3,73	0/0:18,0:17:39.12:0,39,905	0/0:25,0:25:51.18:0,51,1246	0/0:14,0:14:24.08:0,24,574	0/0:23,0:23:42.14:0,42,966	0/0:21,0:21:39.13:0,39,931	0/0:24,0:24:60.19:0,60,1412	0/0:26,0:26:60.21:0,60,1436
chr10	44488918	.	C	CG	903.36	PASS	AB=0.650;AC=2;AF=0.036;AN=56;BaseQRankSum=7.160;DP=725;FS=4.426;HRun=6;HaplotypeScore=92.2564;InbreedingCoeff=-0.0371;MQ=82.38;MQ0=0;MQRankSum=-1.061;QD=13.09;ReadPosRankSum=-0.042;VQSLOD=2.7600;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,99,1002	0/1:10,12:22:99:317,0,246	0/0:19,0:19:44.57:0,45,457	0/0:22,0:22:60.06:0,60,589	0/0:31,0:31:84.17:0,84,845	0/0:23,0:23:66.15:0,66,673	0/0:27,0:27:75.17:0,75,765	0/0:19,0:19:36.07:0,36,367	0/0:28,0:28:81.16:0,81,818	0/0:26,0:26:69.15:0,69,704	0/0:9,0:9:27.06:0,27,275	0/0:29,0:29:84.19:0,84,857	0/0:29,0:29:75.13:0,75,756	0/0:21,0:21:54.08:0,54,539	0/0:22,0:22:54.12:0,54,550	0/0:31,0:30:87.16:0,87,877	0/1:22,25:47:99:675,0,414	0/0:27,0:27:75.15:0,75,757	0/0:15,0:15:39.09:0,39,397	0/0:21,0:21:63.14:0,63,643	0/0:43,0:43:99:0,123,1254	0/0:25,0:25:72.16:0,72,734	0/0:24,0:24:63.12:0,63,633	0/0:25,0:25:72.16:0,72,734	0/0:27,0:27:78.18:0,78,796	0/0:26,0:26:72.12:0,72,718	0/0:38,0:38:99:0,111,1121	0/0:14,0:14:42.09:0,42,425
chr10	44490201	.	A	AG	1019.99	PASS	AB=0.682;AC=2;AF=0.036;AN=56;BaseQRankSum=8.177;DP=731;FS=1.582;HRun=4;HaplotypeScore=79.8873;InbreedingCoeff=-0.0371;MQ=85.84;MQ0=0;MQRankSum=-5.349;QD=17.29;ReadPosRankSum=0.820;VQSLOD=3.1764;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,144,1907	0/1:11,11:22:99:415,0,397	0/0:32,0:32:87.29:0,87,1214	0/0:27,0:26:72.14:0,72,967	0/0:22,0:22:66.22:0,66,915	0/0:29,0:29:87.29:0,87,1214	0/0:17,0:17:51.14:0,51,689	0/0:22,0:22:66.22:0,66,923	0/0:27,0:27:81.24:0,81,1093	0/0:31,0:31:90.30:0,90,1257	0/0:16,0:16:45.14:0,45,610	0/0:42,0:42:99:0,126,1707	0/0:44,0:44:99:0,132,1822	0/0:29,0:29:87.29:0,87,1213	0/0:32,0:32:93.31:0,93,1299	0/0:24,0:24:69.23:0,69,963	0/1:21,16:37:99:694,0,647	0/0:12,0:12:36.09:0,36,482	0/0:23,0:23:69.21:0,69,933	0/0:27,0:27:78.25:0,78,1061	0/0:17,0:17:51.16:0,51,697	0/0:31,0:31:87.29:0,87,1215	0/0:19,0:19:57.18:0,57,776	0/0:30,0:30:90.25:0,90,1202	0/0:17,0:17:51.17:0,51,712	0/0:19,0:19:57.19:0,57,796	0/0:23,0:23:66.20:0,66,903	0/0:10,0:10:30.10:0,30,418
chr10	44490259	.	C	CAGAG	1310.28	PASS	AB=0.824;AC=2;AF=0.036;AN=56;BaseQRankSum=7.329;DP=662;FS=7.788;HRun=0;HaplotypeScore=116.9412;InbreedingCoeff=-0.0371;MQ=84.39;MQ0=0;MQRankSum=-7.325;QD=22.21;ReadPosRankSum=0.001;VQSLOD=2.8778;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,111,2072	0/1:12,1:13:99:125,0,601	0/0:29,0:29:69.21:0,69,1280	0/0:28,0:27:57.19:0,57,1023	0/0:15,0:15:42.13:0,42,758	0/0:18,0:18:54.17:0,54,1003	0/0:18,0:18:45.13:0,45,819	0/0:38,0:38:99:0,105,2017	0/0:22,0:22:63.20:0,63,1178	0/0:26,0:26:75.26:0,75,1451	0/0:14,0:14:39.13:0,39,737	0/0:32,0:32:90.29:0,90,1696	0/0:47,0:45:99:0,138,2603	0/0:21,0:21:63.22:0,63,1221	0/0:35,0:35:99:0,105,1984	0/0:25,0:25:66.23:0,66,1261	0/1:28,18:46:99:1275,0,1159	0/0:14,0:14:39.11:0,39,693	0/0:18,0:18:51.13:0,51,915	0/0:25,0:25:69.24:0,69,1310	0/0:13,0:13:36.12:0,36,698	0/0:20,0:20:60.21:0,60,1162	0/0:9,0:9:27.09:0,27,502	0/0:27,0:27:78.25:0,78,1467	0/0:20,0:20:57.20:0,57,1098	0/0:18,0:18:54.18:0,54,1009	0/0:20,0:20:57.20:0,57,1095	0/0:13,0:13:39.13:0,39,756
chr10	44490433	.	CT	C	4357.24	PASS	AB=0.827;AC=19;AF=0.339;AN=56;BaseQRankSum=9.365;DP=741;FS=0.315;HRun=11;HaplotypeScore=80.4649;InbreedingCoeff=0.7582;MQ=68.37;MQ0=0;MQRankSum=0.282;QD=13.97;ReadPosRankSum=2.203;VQSLOD=5.2828;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,34:40:57.90:682,58,0	0/1:11,3:14:16.21:16,0,255	0/1:30,0:23:17.99:18,0,271	0/0:16,0:11:11.44:0,11,132	1/1:6,24:30:62.89:517,63,0	0/0:30,3:33:53.54:0,54,769	0/0:13,0:13:24.06:0,24,256	0/0:34,0:34:50.48:0,50,707	0/0:22,1:23:26.47:0,26,480	0/0:32,0:32:81.18:0,81,853	0/0:26,0:26:66.15:0,66,694	0/0:22,0:22:57.14:0,57,604	0/0:30,0:30:71.99:0,72,722	0/0:21,0:21:51.10:0,51,529	0/0:39,0:40:96.03:0,96,979	0/0:23,0:23:66.13:0,66,683	0/1:23,24:50:99:396,0,539	0/0:11,0:11:29.21:0,29,280	1/1:4,17:21:50.92:416,51,0	1/1:4,33:38:94.89:768,95,0	1/1:6,20:26:40.86:343,41,0	0/0:24,0:24:32.64:0,33,551	0/0:27,1:28:41.49:0,41,627	0/0:23,0:23:60.10:0,60,622	0/0:27,0:29:65.82:0,66,660	1/1:4,23:27:39.90:531,40,0	1/1:3,20:24:55.96:449,56,0	1/1:3,9:12:26.96:221,27,0
chr10	44490585	.	GAT	G	1117.47	PASS	AB=0.707;AC=2;AF=0.036;AN=56;BaseQRankSum=9.049;DP=666;FS=4.353;HRun=0;HaplotypeScore=120.2582;InbreedingCoeff=-0.0371;MQ=78.66;MQ0=0;MQRankSum=-4.071;QD=15.52;ReadPosRankSum=3.515;VQSLOD=3.2704;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,126,2224	0/1:13,6:19:99:166,0,653	0/0:19,0:19:51.17:0,51,912	0/0:12,0:12:36.12:0,36,653	0/0:29,0:29:81.26:0,81,1475	0/0:27,0:27:81.26:0,81,1484	0/0:20,0:20:57.18:0,57,1027	0/0:24,0:24:72.23:0,72,1270	0/0:32,0:32:96.31:0,96,1764	0/0:35,0:35:99:0,99,1846	0/0:12,0:12:36.12:0,36,674	0/0:26,0:26:78.25:0,78,1429	0/0:26,0:26:72.25:0,72,1339	0/0:13,0:13:39.12:0,39,698	0/0:32,0:32:93.30:0,93,1684	0/0:20,0:20:54.19:0,54,1004	0/1:25,28:53:99:1040,0,901	0/0:12,0:12:30.10:0,30,537	0/0:15,0:15:45.14:0,45,782	0/0:18,0:18:54.19:0,54,1010	0/0:24,0:24:69.20:0,69,1226	0/0:25,0:25:75.23:0,75,1327	0/0:21,0:21:60.21:0,60,1123	0/0:22,0:22:63.16:0,63,1099	0/0:24,0:24:69.24:0,69,1277	0/0:22,0:22:63.22:0,63,1180	0/0:32,0:32:96.32:0,96,1748	0/0:10,0:10:30.10:0,30,550
chr10	44491008	.	A	ATGTG	24643.22	PASS	AB=0.588;AC=45;AF=0.804;AN=56;BaseQRankSum=-2.575;DP=973;FS=17.102;HRun=0;HaplotypeScore=233.4274;InbreedingCoeff=0.8733;MQ=52.98;MQ0=9;MQRankSum=-1.848;QD=30.96;ReadPosRankSum=3.098;VQSLOD=2.8909;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:26,13:40:47.33:1041,47,0	0/1:6,0:20:16.97:104,0,17	0/0:58,0:28:31.95:0,32,697	0/0:36,0:25:50.08:0,50,791	1/1:7,23:31:57.09:1409,57,0	0/0:32,0:32:81.24:0,81,1296	0/0:18,0:18:36.12:0,36,600	1/1:29,15:44:8.72:1135,9,0	0/0:32,0:32:75.25:0,75,1254	1/1:16,20:36:66.23:1574,66,0	1/1:5,13:21:38.60:835,39,0	1/1:12,1:45:53.56:646,54,0	1/1:11,0:44:74.36:1116,74,0	1/1:12,0:48:62.59:816,63,0	1/1:12,31:43:77.95:1929,78,0	1/1:12,37:51:99:2363,102,0	1/1:10,0:37:50.34:279,50,0	1/1:6,11:18:25.41:729,25,0	1/1:9,9:19:36.12:803,36,0	1/1:4,16:25:35.33:704,35,0	1/1:12,30:47:74.99:1793,75,0	1/1:9,0:28:18.91:263,19,0	1/1:8,0:26:34.99:399,35,0	1/1:14,0:36:18.82:229,19,0	1/1:5,24:29:36.12:889,36,0	1/1:10,34:46:99:2378,108,0	1/1:11,17:29:51.18:1257,51,0	1/1:2,26:30:83.76:1953,84,0
chr10	44491229	.	C	CGTGT	16746.63	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-16.000;DP=1091;FS=15.408;HRun=0;HaplotypeScore=311.6046;InbreedingCoeff=0.9936;MQ=55.17;MQ0=0;MQRankSum=-2.696;QD=31.96;ReadPosRankSum=3.943;VQSLOD=3.7635;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:41:46.32:0,46,629	0/0:10,0:17:41.84:0,42,419	0/0:31,0:29:81.07:0,81,942	0/0:29,0:28:66.12:0,66,841	0/0:13,0:24:35.92:0,36,391	0/0:32,0:32:66.09:0,66,1167	0/0:32,0:33:31.10:0,31,928	0/0:19,0:35:93.25:0,93,781	0/0:55,0:57:99:0,123,2005	1/1:3,34:41:72.76:1905,73,0	1/1:1,17:19:15.05:396,15,0	1/1:4,42:49:53.77:1512,54,0	1/1:1,48:54:66.18:1796,66,0	1/1:2,64:70:63.37:2345,63,0	1/1:0,55:61:61.45:1695,61,0	1/1:1,59:64:30.81:2502,31,0	0/0:9,0:11:14.82:0,15,116	1/1:1,19:21:17.95:445,18,0	0/0:3,0:19:56.62:0,57,686	0/0:9,0:39:99:0,99,1240	0/0:26,0:88:99:0,207,2468	1/1:2,28:33:39.13:1106,39,0	1/1:2,31:38:33.11:941,33,0	1/1:23,20:43:53.93:1511,54,0	1/1:0,28:30:21.07:591,21,0	0/0:13,0:50:99:0,124,1586	0/0:14,0:38:77.93:0,78,908	0/0:12,0:23:56.95:0,57,624
chr10	44491308	.	AATGT	A	900.56	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=1.953;DP=939;FS=0.000;HRun=0;HaplotypeScore=267.2469;InbreedingCoeff=0.9886;MQ=55.78;MQ0=0;MQRankSum=-3.665;QD=42.88;ReadPosRankSum=3.440;VQSLOD=3.5184;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:85.09:0,85,1957	1/1:1,10:11:27.09:483,27,0	0/0:51,0:49:99:0,113,2515	0/0:40,0:37:89.44:0,89,1797	0/0:22,0:22:60.20:0,60,1455	0/0:37,0:37:99:0,99,2286	0/0:41,0:41:99:0,108,2280	0/0:60,0:60:99:0,165,3795	0/0:40,0:40:98.59:0,99,2525	0/0:28,0:28:78.25:0,78,1923	0/0:27,0:27:60.14:0,60,1456	0/0:40,0:40:84.22:0,84,2052	0/0:34,0:34:81.26:0,81,2025	0/0:54,0:54:99:0,126,3136	0/0:49,0:49:99:0,102,2539	0/0:46,0:45:99:0,102,2550	1/1:0,10:10:30.10:539,30,0	0/0:10,0:9:13.82:0,14,442	0/0:19,0:19:43.03:0,43,1045	0/0:39,0:39:87.24:0,87,2028	0/0:56,0:56:99:0,129,3035	0/0:31,0:31:81.19:0,81,1960	0/0:18,0:18:42.13:0,42,1035	0/0:27,0:27:54.02:0,54,1190	0/0:31,0:31:71.61:0,72,1795	0/0:37,0:37:96.28:0,96,2394	0/0:23,0:23:66.14:0,66,1553	0/0:22,0:22:51.15:0,51,1182
chr10	44492211	.	CCTT	C	527.59	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.648;DP=758;FS=3.898;HRun=0;HaplotypeScore=119.2971;InbreedingCoeff=0.9974;MQ=77.28;MQ0=1;MQRankSum=-3.205;QD=26.38;ReadPosRankSum=-3.940;VQSLOD=2.7930;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:87.30:0,87,1911	0/0:8,0:8:24.08:0,24,519	0/0:25,0:25:72.20:0,72,1429	0/0:25,0:25:69.22:0,69,1387	0/0:37,0:37:99:0,102,2143	0/0:21,0:21:60.21:0,60,1321	0/0:19,0:19:51.18:0,51,1124	1/1:7,13:20:39.13:622,39,0	0/0:28,0:28:81.23:0,81,1701	0/0:34,0:34:99:0,102,2231	0/0:21,0:21:57.02:0,57,1059	0/0:41,0:41:99:0,120,2600	0/0:24,0:24:57.20:0,57,1230	0/0:34,0:34:99:0,99,2182	0/0:44,0:44:99:0,120,2503	0/0:38,0:38:99:0,108,2376	0/0:25,0:25:75.26:0,75,1641	0/0:18,0:18:54.19:0,54,1192	0/0:17,0:17:51.17:0,51,1085	0/0:29,0:29:87.21:0,87,1825	0/0:28,0:27:81.23:0,81,1713	0/0:31,0:31:90.22:0,90,1885	0/0:32,0:32:93.19:0,93,1894	0/0:27,0:27:78.74:0,79,1701	0/0:17,0:17:51.13:0,51,1077	0/0:39,0:39:99:0,111,2398	0/0:37,0:37:99:0,102,2202	0/0:10,0:10:30.10:0,30,662
chr10	44492556	.	CAGA	C	99.67	PASS	AB=1.000;AC=10;AF=0.179;AN=56;BaseQRankSum=6.563;DP=459;FS=17.232;HRun=0;HaplotypeScore=225.9144;InbreedingCoeff=0.1847;MQ=80.00;MQ0=3;MQRankSum=-5.688;QD=1.13;ReadPosRankSum=5.358;VQSLOD=1.0996;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:0.36:0,0,33	1/1:3,4:7:2.74:12,3,0	0/0:35,0:23:59.05:0,59,738	0/0:50,0:38:57.17:0,57,694	0/0:14,0:14:9.76:0,10,96	0/0:25,0:25:12.72:0,13,91	0/0:22,0:18:6.65:0,7,83	0/0:11,0:11:29.27:0,29,272	0/1:24,0:24:43.44:43,0,66	0/1:15,0:14:25.47:25,0,76	0/0:9,0:9:1.36:0,1,3	0/1:17,0:17:55.21:55,0,68	0/1:20,0:20:28.63:29,0,31	0/0:14,0:14:2.39:0,2,37	0/0:17,0:16:8.47:0,8,88	0/0:12,0:12:4.02:0,4,67	1/1:2,1:3:5.23:53,5,0	0/0:6,0:6:10.15:0,10,77	0/0:8,0:8:20.20:0,20,166	0/0:18,0:18:0.39:0,0,21	0/0:7,0:7:4.55:0,5,28	0/0:13,0:12:0.26:0,0,1	0/0:8,0:8:0.34:0,0,1	0/0:28,0:27:0.78:0,1,2	0/0:12,0:12:5.62:0,6,63	0/0:19,0:19:27.77:0,28,233	0/0:24,0:23:12.81:0,13,97	1/1:2,0:2:2.04:6,2,0
chr10	44492559	.	A	AC	5974.93	PASS	AB=0.875;AC=54;AF=0.964;AN=56;BaseQRankSum=-0.819;DP=427;FS=0.000;HRun=0;HaplotypeScore=194.6963;InbreedingCoeff=-0.0434;MQ=81.37;MQ0=3;MQRankSum=-6.061;QD=13.99;ReadPosRankSum=3.606;VQSLOD=5.8060;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,15:16:16.12:201,16,0	1/1:4,0:4:3.01:47,3,0	0/1:30,4:21:50.24:50,0,467	0/1:39,7:34:99:195,0,353	1/1:0,12:12:13.64:237,14,0	1/1:2,21:23:5.72:95,6,0	1/1:0,20:16:9.03:144,9,0	1/1:0,10:10:27.09:429,27,0	1/1:2,24:26:30.10:465,30,0	1/1:1,13:13:36.12:563,36,0	1/1:2,7:9:6.02:96,6,0	1/1:1,15:16:27.09:412,27,0	1/1:2,16:18:27.98:425,28,0	1/1:2,13:15:14.63:190,15,0	1/1:0,17:16:8.89:144,9,0	1/1:0,10:10:6.02:95,6,0	1/1:1,0:1:3.01:35,3,0	1/1:0,6:6:15.05:237,15,0	1/1:0,8:8:24.08:379,24,0	1/1:14,4:18:7.84:101,8,0	1/1:0,5:5:1.55:4,2,0	1/1:1,12:12:3.01:38,3,0	1/1:1,7:8:3.01:38,3,0	1/1:2,25:26:6.01:75,6,0	1/1:0,12:12:6.02:96,6,0	1/1:1,15:16:48.16:764,48,0	1/1:12,8:19:27.07:401,27,0	1/1:2,0:2:2.92:17,3,0
chr10	44492563	.	GACAAGACAAGAACA	G	7713.34	PASS	AB=0.925;AC=43;AF=0.796;AN=54;BaseQRankSum=-2.969;DP=403;FS=7.113;HRun=0;HaplotypeScore=225.8650;InbreedingCoeff=0.3547;MQ=82.84;MQ0=3;MQRankSum=-5.871;QD=21.79;ReadPosRankSum=4.811;VQSLOD=2.8561;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:12,0:12:0.51:252,0,1	0/0:4,0:4:2.37:0,2,8	0/0:34,0:21:9.38:0,9,996	0/1:47,0:34:45.09:45,0,874	1/1:12,0:12:7.52:268,8,0	1/1:22,0:22:5.51:141,6,0	1/1:19,0:15:6.02:144,6,0	1/1:9,0:9:27.07:488,27,0	1/1:26,0:26:27.08:686,27,0	1/1:12,0:11:27.09:877,27,0	./.	1/1:13,3:16:27.08:733,27,0	1/1:16,1:17:24.08:677,24,0	1/1:10,3:13:5.87:131,6,0	1/1:15,0:14:6.10:73,6,0	1/1:10,0:10:3.01:94,3,0	1/1:1,0:1:3.01:94,3,0	1/1:5,0:5:9.03:236,9,0	1/1:8,0:8:21.06:463,21,0	1/1:18,0:18:1.90:136,2,0	0/0:4,0:4:2.37:0,2,8	0/1:11,1:11:0.26:0,0,0	0/1:5,2:7:0:0,0,0	0/1:23,2:24:0:0,0,0	1/1:10,0:10:6.01:66,6,0	1/1:16,0:16:39.13:1169,39,0	1/1:20,0:19:27.09:840,27,0	1/1:2,0:2:3.01:98,3,0
chr10	44492565	.	CAAG	C	2964.53	PASS	AB=0.889;AC=42;AF=0.778;AN=54;BaseQRankSum=2.896;DP=392;FS=19.970;HRun=0;HaplotypeScore=203.5747;InbreedingCoeff=0.1991;MQ=82.44;MQ0=3;MQRankSum=-4.040;QD=8.85;ReadPosRankSum=4.252;VQSLOD=1.7322;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:8,3:11:6.02:115,6,0	1/1:0,4:4:2.68:11,3,0	0/1:30,1:19:4.47:4,0,623	0/0:44,0:33:7.66:0,8,674	1/1:10,1:11:10.77:113,11,0	1/1:20,2:22:5.36:72,5,0	1/1:16,2:14:6:65,6,0	0/1:9,0:9:28.55:121,0,29	1/1:21,5:26:27.04:335,27,0	1/1:5,7:11:22.47:343,22,0	./.	1/1:15,0:16:27.05:353,27,0	1/1:14,1:16:15.89:248,16,0	1/1:13,0:13:5.66:69,6,0	1/1:6,9:14:5.16:35,5,0	1/1:3,7:10:3.01:46,3,0	1/1:1,0:1:3.01:40,3,0	0/1:4,1:5:3:76,0,3	0/1:6,2:8:0.10:176,0,0	1/1:17,1:18:4.61:54,5,0	0/0:3,1:4:1.55:0,2,4	0/1:11,1:11:0.21:0,0,0	0/1:7,0:7:0:0,0,0	0/1:25,0:24:0:0,0,0	0/1:3,7:10:7.18:20,0,7	1/1:11,2:13:20.93:439,21,0	1/1:16,4:19:27.06:326,27,0	1/1:2,0:2:2.98:22,3,0
chr10	44492566	.	A	AC	4141.17	PASS	AB=0.689;AC=45;AF=0.865;AN=52;BaseQRankSum=0.846;DP=381;FS=11.247;HRun=1;HaplotypeScore=192.5576;InbreedingCoeff=0.3911;MQ=83.42;MQ0=3;MQRankSum=-6.221;QD=13.10;ReadPosRankSum=2.582;VQSLOD=1.7958;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,6:9:13.10:146,13,0	0/0:4,0:4:2.22:0,2,7	0/0:30,0:19:39:0,39,433	0/1:42,3:32:40.25:40,0,447	1/1:2,9:11:10.60:150,11,0	1/1:4,20:24:6.19:85,6,0	1/1:3,14:13:6.02:93,6,0	1/1:2,7:9:27.07:401,27,0	1/1:6,20:26:27.07:368,27,0	1/1:7,3:10:27.09:396,27,0	./.	1/1:5,11:16:26.61:320,27,0	1/1:3,13:16:22.49:290,22,0	1/1:4,9:13:6:71,6,0	1/1:10,4:13:5.87:73,6,0	1/1:7,1:8:3.01:42,3,0	1/1:1,0:1:3.01:33,3,0	1/1:3,2:5:9.03:136,9,0	1/1:4,3:7:21.06:304,21,0	1/1:15,3:18:7.84:97,8,0	1/1:1,2:3:1.55:4,2,0	0/1:2,10:11:0:0,0,0	0/1:2,5:7:0:0,0,0	./.	1/1:8,2:10:6.01:73,6,0	1/1:2,11:13:39.13:611,39,0	1/1:16,4:19:27.06:390,27,0	1/1:2,0:2:2.92:17,3,0
chr10	44492571	.	A	AC	2107.09	PASS	AB=0.800;AC=40;AF=0.833;AN=48;BaseQRankSum=5.271;DP=309;FS=14.508;HRun=1;HaplotypeScore=166.5097;InbreedingCoeff=0.4949;MQ=92.00;MQ0=3;MQRankSum=-5.596;QD=11.15;ReadPosRankSum=4.112;VQSLOD=0.6702;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,4:7:13.10:121,13,0	./.	0/0:30,0:19:39.17:0,39,482	0/0:42,1:31:40.35:0,40,503	1/1:1,6:7:7.61:93,8,0	1/1:5,15:20:3.18:34,3,0	1/1:3,9:8:3:27,3,0	1/1:0,2:2:6.02:82,6,0	1/1:7,15:22:20.52:185,21,0	1/1:8,0:8:23.99:257,24,0	./.	1/1:4,7:11:16.91:171,17,0	1/1:3,9:12:17.46:172,17,0	1/1:3,8:11:3:37,3,0	0/1:9,0:8:0.14:0,0,0	1/1:7,0:7:3:29,3,0	1/1:1,0:1:2.84:14,3,0	1/1:1,1:2:5.97:61,6,0	1/1:2,1:3:9.03:117,9,0	1/1:15,0:15:4.83:39,5,0	1/1:1,1:2:1.55:4,2,0	./.	0/1:2,4:6:0:0,0,0	./.	0/0:8,1:9:1.96:0,2,7	1/1:2,9:11:33.11:455,33,0	1/1:16,3:18:26.87:321,27,0	1/1:2,0:2:2.60:10,3,0
chr10	44492573	.	GAACA	G	3009.40	PASS	AB=0.554;AC=39;AF=0.813;AN=48;BaseQRankSum=3.673;DP=310;FS=10.497;HRun=0;HaplotypeScore=167.9633;InbreedingCoeff=0.4238;MQ=91.84;MQ0=3;MQRankSum=-4.624;QD=14.40;ReadPosRankSum=4.179;VQSLOD=2.6986;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,6:7:4.85:135,5,0	./.	0/0:31,0:19:30.21:0,30,533	0/0:43,0:30:6.25:0,6,472	1/1:2,4:7:5.13:110,5,0	1/1:18,2:20:2.45:35,2,0	1/1:10,2:8:3.01:36,3,0	1/1:0,2:2:6.02:107,6,0	1/1:17,5:22:20.74:281,21,0	1/1:1,7:8:24.08:415,24,0	./.	1/1:4,7:11:18.06:280,18,0	1/1:2,10:12:16.30:252,16,0	1/1:4,7:11:2.90:51,3,0	0/1:0,9:8:0.14:0,0,0	1/1:0,7:7:3.01:53,3,0	1/1:1,0:1:3:29,3,0	1/1:1,1:2:6.02:113,6,0	1/1:0,3:3:9.03:153,9,0	1/1:14,1:15:1.13:49,1,0	0/0:1,2:2:1.55:0,2,4	./.	./.	0/1:8,11:18:0:0,0,0	0/1:1,7:9:0:0,0,0	1/1:3,8:11:33.11:593,33,0	1/1:12,7:18:27.09:403,27,0	1/1:2,0:2:3:29,3,0
chr10	44492574	.	A	AC	1281.59	PASS	AB=1.000;AC=39;AF=0.813;AN=48;BaseQRankSum=3.827;DP=314;FS=13.114;HRun=0;HaplotypeScore=168.7868;InbreedingCoeff=0.4532;MQ=91.29;MQ0=4;MQRankSum=-4.737;QD=6.34;ReadPosRankSum=2.237;VQSLOD=3.0281;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,0:7:13.10:118,13,0	./.	0/0:31,0:19:18.95:0,19,377	0/0:40,1:30:24.33:0,24,401	1/1:6,2:8:6.83:71,7,0	1/1:5,15:20:3.18:33,3,0	1/1:3,9:8:2.97:21,3,0	1/1:2,0:2:6:56,6,0	1/1:7,15:22:20.01:143,20,0	1/1:10,0:9:10.80:31,11,0	./.	1/1:11,0:11:5.61:82,6,0	1/1:12,0:12:3.17:65,3,0	1/1:10,1:11:2.96:20,3,0	0/1:9,0:8:0.14:0,0,0	1/1:7,0:7:2.50:9,2,0	1/1:2,0:2:2.37:8,2,0	1/1:1,1:2:2.86:20,3,0	1/1:3,0:3:9.01:85,9,0	1/1:15,0:15:4.83:38,5,0	1/1:3,0:2:1.55:4,2,0	./.	0/1:6,0:6:0:0,0,0	./.	0/1:9,0:9:0:0,0,0	1/1:9,3:11:32.99:345,33,0	1/1:19,0:18:22.90:251,23,0	0/0:2,0:2:1.55:0,2,4
chr10	44492577	.	A	AC	1802.12	PASS	AB=1.000;AC=42;AF=0.808;AN=52;BaseQRankSum=4.449;DP=385;FS=6.250;HRun=1;HaplotypeScore=208.0085;InbreedingCoeff=0.2231;MQ=81.22;MQ0=4;MQRankSum=-3.981;QD=5.87;ReadPosRankSum=4.069;VQSLOD=0.7587;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:15:16.25:135,16,0	./.	0/1:27,0:17:23.61:24,0,260	0/0:40,0:29:1.94:0,2,336	1/1:10,0:10:5.35:45,5,0	1/1:7,18:24:3.11:35,3,0	1/1:7,10:13:3:26,3,0	1/1:3,0:3:5.65:49,6,0	1/1:9,17:26:23.85:224,24,0	1/1:12,0:11:29.91:262,30,0	0/0:10,0:9:0:0,0,0	1/1:14,0:14:20.80:175,21,0	1/1:13,0:13:16.49:124,16,0	1/1:10,0:11:2.98:23,3,0	1/1:14,0:12:1.42:4,1,0	1/1:9,0:9:3.01:30,3,0	1/1:5,2:6:11.05:99,11,0	1/1:4,1:5:8.90:87,9,0	1/1:5,0:5:2.04:67,2,0	1/1:15,0:15:2.99:28,3,0	1/1:10,0:8:7.45:41,7,0	1/1:13,0:11:1.82:5,2,0	0/1:10,0:9:0:0,0,0	./.	0/1:9,0:9:0:0,0,0	0/1:17,0:15:8.15:228,0,8	1/1:19,0:18:24.13:197,24,0	0/0:2,0:2:1.25:0,1,3
chr10	44492587	.	C	CAG	270.53	PASS	AB=0.964;AC=20;AF=0.370;AN=54;BaseQRankSum=-0.176;DP=448;FS=8.526;HRun=0;HaplotypeScore=206.9146;InbreedingCoeff=0.0929;MQ=66.42;MQ0=13;MQRankSum=1.611;QD=0.91;ReadPosRankSum=-1.369;VQSLOD=1.6176;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:17:0.93:2,1,0	./.	0/1:17,0:11:12.94:13,0,47	0/1:33,0:24:22.04:22,0,39	0/0:9,0:9:0.74:0,1,2	0/0:28,0:26:1.11:0,1,5	1/1:22,0:18:3.44:21,3,0	0/1:11,9:16:23.53:259,0,24	0/1:30,0:30:13.23:13,0,137	0/0:15,0:14:6.63:0,7,54	0/0:14,0:13:5.92:0,6,39	0/1:17,0:17:4.71:5,0,28	0/1:12,0:12:2.48:36,0,2	1/1:15,0:14:1.87:8,2,0	0/1:16,0:14:0.40:0,0,0	0/1:11,0:11:0.33:0,0,5	0/0:12,0:11:7.93:0,8,30	0/0:9,0:9:15.75:0,16,96	0/1:8,0:7:1.40:1,0,37	0/1:15,0:15:0:0,0,0	0/0:12,0:9:0.47:0,0,1	0/1:14,0:12:0:0,0,0	0/1:13,1:13:0:0,0,0	0/0:24,0:23:0:0,0,0	0/1:10,0:10:0.06:0,0,0	0/0:17,0:14:25.45:0,25,139	0/1:22,0:20:0.95:1,0,17	0/0:3,0:3:5.83:0,6,37
chr10	44492597	.	CAG	C	748.85	PASS	AB=0.968;AC=35;AF=0.648;AN=54;BaseQRankSum=1.246;DP=425;FS=2.717;HRun=0;HaplotypeScore=157.9024;InbreedingCoeff=0.1907;MQ=52.44;MQ0=19;MQRankSum=1.459;QD=2.26;ReadPosRankSum=-0.987;VQSLOD=2.7576;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:14:2.56:5,3,0	1/1:9,0:9:0.47:1,0,0	0/1:8,0:4:1.85:2,0,38	0/1:25,0:13:27.03:27,0,66	0/1:6,0:6:0:0,0,0	0/1:26,0:23:0:0,0,1	0/0:23,0:19:0.36:0,0,1	0/1:26,0:21:21.01:21,0,167	0/0:25,0:23:13.29:0,13,188	1/1:16,3:17:37.73:272,38,0	1/1:11,3:13:7.59:40,8,0	0/1:10,7:17:7.57:36,0,8	1/1:10,1:11:13.88:79,14,0	1/1:14,0:13:1.72:56,2,0	1/1:15,2:15:4.97:25,5,0	1/1:12,1:12:8.55:53,9,0	1/1:14,0:12:11.27:53,11,0	0/1:9,0:9:25.30:55,0,25	0/0:7,0:6:2.41:0,2,94	./.	1/1:13,0:9:2.24:5,2,0	1/1:16,1:15:10.19:78,10,0	1/1:15,0:14:5.99:48,6,0	0/0:22,0:21:0.77:0,1,1	0/1:7,0:7:0:0,0,0	0/1:18,0:15:10.11:10,0,95	1/1:17,0:15:2.49:16,2,0	0/0:3,0:3:4.51:0,5,23
chr10	44492609	.	CAG	C	994.89	PASS	AB=1.000;AC=31;AF=0.596;AN=52;BaseQRankSum=-0.135;DP=420;FS=17.566;HRun=0;HaplotypeScore=127.4207;InbreedingCoeff=0.3896;MQ=34.70;MQ0=20;MQRankSum=1.801;QD=3.48;ReadPosRankSum=-2.537;VQSLOD=1.1522;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:11:2.56:5,3,0	1/1:6,2:7:3.29:20,3,0	0/0:4,0:1:3.01:0,3,44	0/0:11,0:3:0.88:0,1,17	0/1:5,0:5:0:0,0,0	0/1:27,0:24:0:0,0,1	0/0:24,0:20:3.46:0,3,25	0/1:28,0:23:55.90:56,0,230	0/0:22,0:20:10.52:0,11,109	1/1:20,1:19:37.60:270,38,0	1/1:13,1:13:7.58:39,8,0	1/1:19,0:19:3.52:103,4,0	1/1:9,0:9:11.75:76,12,0	1/1:17,0:16:12.84:110,13,0	1/1:15,2:15:13.83:99,14,0	1/1:14,0:13:8.55:55,9,0	1/1:14,1:13:7.42:83,7,0	0/1:11,0:11:23.18:60,0,23	0/0:13,0:11:7.21:0,7,179	./.	1/1:15,0:10:2.24:5,2,0	1/1:19,0:17:13.51:104,14,0	1/1:16,0:15:5.99:51,6,0	0/0:18,0:18:0.61:0,1,1	./.	0/1:18,0:16:12.52:13,0,413	0/0:16,0:14:8.87:0,9,60	0/0:4,0:4:5.97:0,6,50
chr10	44493357	.	C	CCTCT	2072.41	PASS	AB=0.745;AC=2;AF=0.036;AN=56;BaseQRankSum=9.109;DP=763;FS=3.258;HRun=0;HaplotypeScore=182.4411;InbreedingCoeff=-0.0371;MQ=87.99;MQ0=0;MQRankSum=-9.294;QD=24.67;ReadPosRankSum=0.009;VQSLOD=3.1267;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,111,1852	0/1:18,8:26:99:692,0,581	0/0:26,0:26:69.19:0,69,1193	0/0:30,0:30:80.06:0,80,1233	0/0:27,0:27:69.07:0,69,1110	0/0:33,0:33:87.29:0,87,1495	0/0:32,0:32:90.29:0,90,1618	0/0:28,0:28:72.24:0,72,1288	0/0:32,0:32:93.30:0,93,1634	0/0:29,0:29:78.26:0,78,1329	0/0:11,0:11:33.11:0,33,591	0/0:27,0:27:81.28:0,81,1447	0/0:37,0:37:99:0,99,1799	0/0:28,0:28:81.26:0,81,1402	0/0:35,0:35:99:0,99,1805	0/0:27,0:27:78.27:0,78,1429	0/1:36,22:58:99:1469,0,1382	0/0:24,0:24:63.22:0,63,1159	0/0:15,0:15:36.12:0,36,619	0/0:16,0:16:48.16:0,48,853	0/0:32,0:32:93.28:0,93,1564	0/0:18,0:18:51.17:0,51,901	0/0:16,0:16:44.76:0,45,774	0/0:28,0:28:78.22:0,78,1373	0/0:26,0:26:75.26:0,75,1316	0/0:22,0:22:54.18:0,54,948	0/0:31,0:31:93.32:0,93,1682	0/0:9,0:9:27.09:0,27,490
chr10	44493366	.	T	TTGCATC	2667.97	PASS	AB=0.714;AC=2;AF=0.036;AN=56;BaseQRankSum=8.010;DP=783;FS=1.403;HRun=0;HaplotypeScore=210.1631;InbreedingCoeff=-0.0371;MQ=88.05;MQ0=0;MQRankSum=-9.047;QD=30.67;ReadPosRankSum=1.299;VQSLOD=3.5865;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,111,2418	0/1:17,12:30:99:1161,0,747	0/0:26,0:26:66.19:0,66,1323	0/0:31,0:31:76.73:0,77,1580	0/0:30,0:30:87.05:0,87,1780	0/0:35,0:35:90.24:0,90,1889	0/0:32,0:32:90.30:0,90,2031	0/0:28,0:28:75.23:0,75,1590	0/0:32,0:32:90.28:0,90,1975	0/0:29,0:29:84.27:0,84,1816	0/0:12,0:12:33.09:0,33,675	0/0:28,0:28:78.25:0,78,1657	0/0:37,0:37:99:0,105,2338	0/0:27,0:27:81.28:0,81,1835	0/0:35,0:35:99:0,99,2110	0/0:28,0:28:78.27:0,78,1760	0/1:36,20:57:99:1596,0,1726	0/0:25,0:25:72.21:0,72,1569	0/0:14,0:14:42.13:0,42,872	0/0:18,0:18:54.17:0,54,1141	0/0:32,0:32:90.25:0,90,1968	0/0:20,0:20:60.20:0,60,1318	0/0:19,0:19:53.88:0,54,1228	0/0:31,0:31:87.22:0,87,1824	0/0:27,0:27:78.27:0,78,1764	0/0:22,0:22:63.22:0,63,1447	0/0:29,0:29:84.25:0,84,1844	0/0:9,0:9:27.09:0,27,622
chr10	44493710	.	AG	A	970.99	PASS	AB=0.685;AC=2;AF=0.036;AN=56;BaseQRankSum=9.916;DP=796;FS=0.000;HRun=2;HaplotypeScore=83.0021;InbreedingCoeff=-0.0372;MQ=79.56;MQ0=0;MQRankSum=-2.891;QD=12.61;ReadPosRankSum=1.974;VQSLOD=2.4516;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,141,2073	0/1:16,16:32:99:468,0,581	0/0:17,0:17:50.58:0,51,668	0/0:22,0:22:58.27:0,58,829	0/0:35,0:35:99:0,99,1459	0/0:23,0:23:69.22:0,69,1012	0/0:29,0:29:84.27:0,84,1237	0/0:29,0:29:78.25:0,78,1149	0/0:24,0:24:72.24:0,72,1073	0/0:24,0:24:72.24:0,72,1060	0/0:13,0:13:39.13:0,39,584	0/0:26,0:26:78.26:0,78,1167	0/0:37,0:37:99:0,111,1657	0/0:35,0:35:99:0,105,1533	0/0:39,0:39:99:0,111,1658	0/0:27,0:27:78.26:0,78,1169	0/1:26,19:45:99:592,0,767	0/0:30,0:30:84.24:0,84,1234	0/0:24,0:23:72.23:0,72,1049	0/0:23,0:23:63.21:0,63,944	0/0:44,0:44:99:0,126,1863	0/0:29,0:29:81.27:0,81,1212	0/0:20,0:20:60.18:0,60,875	0/0:42,0:42:99:0,123,1843	0/0:26,0:26:78.24:0,78,1145	0/0:25,0:25:75.25:0,75,1124	0/0:22,0:22:66.22:0,66,989	0/0:7,0:7:21.07:0,21,315
chr10	44493751	.	C	CT	1048.11	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-8.328;DP=763;FS=4.588;HRun=5;HaplotypeScore=80.0321;InbreedingCoeff=0.9989;MQ=84.83;MQ0=0;MQRankSum=-1.471;QD=27.58;ReadPosRankSum=-4.697;VQSLOD=1.3953;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,111,1193	0/0:29,0:29:75.18:0,75,802	0/0:24,0:24:63.16:0,63,677	0/0:23,0:23:51.71:0,52,558	0/0:32,0:32:81.18:0,81,858	0/0:30,0:30:87.22:0,87,934	0/0:29,0:29:78.18:0,78,830	1/1:7,31:38:90.26:1143,90,0	0/0:19,0:19:54.13:0,54,580	0/0:19,0:19:42.10:0,42,451	0/0:15,0:15:30.06:0,30,315	0/0:29,0:29:78.19:0,78,838	0/0:37,0:37:99:0,105,1128	0/0:24,0:24:69.17:0,69,741	0/0:37,0:37:99:0,102,1080	0/0:29,0:29:81.17:0,81,855	0/0:44,0:44:99:0,108,1153	0/0:23,0:23:69.17:0,69,742	0/0:25,0:25:63.15:0,63,677	0/0:24,0:24:60.15:0,60,644	0/0:29,0:29:72.18:0,72,773	0/0:21,0:21:54.12:0,54,572	0/0:18,0:18:30.07:0,30,322	0/0:40,0:40:99:0,108,1159	0/0:26,0:26:60.14:0,60,645	0/0:19,0:19:45.10:0,45,478	0/0:25,0:25:69.14:0,69,725	0/0:14,0:14:42.11:0,42,451
chr10	44493909	.	TA	T	1079.26	PASS	AB=0.694;AC=2;AF=0.036;AN=56;BaseQRankSum=9.865;DP=743;FS=1.351;HRun=2;HaplotypeScore=91.5318;InbreedingCoeff=-0.0370;MQ=82.13;MQ0=0;MQRankSum=-2.881;QD=13.16;ReadPosRankSum=3.017;VQSLOD=2.9307;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,147,2179	0/1:12,7:19:99:221,0,398	0/0:22,0:22:63.19:0,63,919	0/0:20,0:20:54.17:0,54,776	0/0:21,0:21:63.21:0,63,941	0/0:24,0:24:72.24:0,72,1079	0/0:23,0:23:66.22:0,66,988	0/0:26,0:26:69.22:0,69,999	0/0:18,0:18:54.18:0,54,808	0/0:36,0:36:99:0,108,1610	0/0:28,0:28:81.27:0,81,1213	0/0:33,0:33:96.29:0,96,1397	0/0:27,0:27:81.26:0,81,1192	0/0:32,0:32:96.32:0,96,1432	0/0:30,0:30:90.29:0,90,1313	0/0:25,0:25:75.24:0,75,1094	0/1:30,33:63:99:947,0,1168	0/0:22,0:22:63.20:0,63,923	0/0:20,0:20:60.20:0,60,899	0/0:19,0:19:51.17:0,51,764	0/0:31,0:31:90.30:0,90,1349	0/0:25,0:25:72.24:0,72,1077	0/0:14,0:14:42.13:0,42,608	0/0:30,0:30:90.28:0,90,1321	0/0:31,0:31:93.31:0,93,1392	0/0:22,0:22:66.22:0,66,971	0/0:19,0:19:57.19:0,57,852	0/0:13,0:13:36.09:0,36,499
chr10	44494474	.	C	CT	392.30	PASS	AB=0.744;AC=2;AF=0.036;AN=56;BaseQRankSum=7.011;DP=762;FS=2.041;HRun=0;HaplotypeScore=85.6256;InbreedingCoeff=-0.0371;MQ=84.18;MQ0=0;MQRankSum=-6.984;QD=6.65;ReadPosRankSum=0.526;VQSLOD=3.5285;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,135,1832	0/1:15,9:23:99:245,0,560	0/0:24,0:24:66.20:0,66,887	0/0:22,0:22:57.19:0,57,795	0/0:34,0:34:99:0,99,1383	0/0:25,0:25:75.21:0,75,991	0/0:19,0:19:57.19:0,57,796	0/0:36,0:36:99:0,102,1366	0/0:31,0:31:93.30:0,93,1281	0/0:34,0:34:99:0,102,1397	0/0:18,0:18:54.18:0,54,755	0/0:30,0:30:90.30:0,90,1258	0/0:29,0:29:84.28:0,84,1174	0/0:22,0:22:66.22:0,66,918	0/0:31,0:31:93.30:0,93,1282	0/0:34,0:34:99:0,102,1426	0/1:24,11:35:99:236,0,890	0/0:26,0:26:71.71:0,72,1024	0/0:23,0:23:69.23:0,69,962	0/0:28,0:28:78.25:0,78,1073	0/0:40,0:40:99:0,120,1621	0/0:23,0:23:69.22:0,69,948	0/0:16,0:16:45.13:0,45,605	0/0:24,0:24:72.22:0,72,988	0/0:19,0:19:57.17:0,57,778	0/0:30,0:30:84.28:0,84,1171	0/0:32,0:32:96.32:0,96,1343	0/0:8,0:8:24.08:0,24,336
chr10	44494939	.	TA	T	788.49	PASS	AB=0.704;AC=2;AF=0.036;AN=56;BaseQRankSum=8.890;DP=765;FS=0.000;HRun=5;HaplotypeScore=116.0978;InbreedingCoeff=-0.0370;MQ=85.88;MQ0=0;MQRankSum=-1.879;QD=10.11;ReadPosRankSum=0.026;VQSLOD=0.8011;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,150,2034	0/1:12,7:19:99:122,0,386	0/0:25,0:25:63.21:0,63,850	0/0:25,0:26:47.46:0,47,715	0/0:30,0:30:87.28:0,87,1175	0/0:22,0:22:63.20:0,63,847	0/0:29,0:29:81.26:0,81,1093	0/0:31,0:31:84.20:0,84,1084	0/0:29,0:29:87.27:0,87,1152	0/0:27,0:27:81.27:0,81,1108	0/0:29,0:29:78.24:0,78,1041	0/0:19,0:19:57.18:0,57,765	0/0:25,0:25:66.22:0,66,901	0/0:34,0:34:99:0,102,1344	0/0:25,0:25:72.23:0,72,971	0/0:18,0:18:51.16:0,51,680	0/1:31,28:59:99:756,0,925	0/0:18,0:18:54.16:0,54,721	0/0:28,0:28:81.26:0,81,1094	0/0:18,0:18:54.17:0,54,721	0/0:35,0:35:96.29:0,96,1277	0/0:19,0:19:57.18:0,57,758	0/0:19,0:19:54.17:0,54,722	0/0:31,0:31:69.17:0,69,906	0/0:20,0:20:57.19:0,57,780	0/0:33,0:33:96.31:0,96,1294	0/0:25,0:25:72.24:0,72,982	0/0:20,0:20:57.19:0,57,779
chr10	44495343	.	A	AAG	1030.23	PASS	AB=0.669;AC=2;AF=0.036;AN=56;BaseQRankSum=3.070;DP=664;FS=3.567;HRun=0;HaplotypeScore=86.8192;InbreedingCoeff=-0.0380;MQ=77.80;MQ0=0;MQRankSum=-2.630;QD=18.73;ReadPosRankSum=1.642;VQSLOD=3.6527;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,120,1501	0/1:7,7:14:99:266,0,156	0/0:26,1:27:43.23:0,43,612	0/0:18,0:18:24.07:0,24,282	0/0:22,0:22:60.19:0,60,757	0/0:27,0:27:81.26:0,81,1022	0/0:21,0:21:54.17:0,54,681	0/0:34,0:34:69.22:0,69,871	0/0:24,0:24:66.21:0,66,832	0/0:29,0:29:72.21:0,72,878	0/0:23,0:23:60.18:0,60,744	0/0:18,0:18:45.14:0,45,568	0/0:26,0:26:60.12:0,60,710	0/0:20,0:20:48.15:0,48,606	0/0:26,0:26:66.21:0,66,833	0/0:21,0:21:63.20:0,63,795	0/1:21,20:41:99:853,0,415	0/0:10,0:10:24.08:0,24,303	0/0:15,0:15:36.08:0,36,437	0/0:32,0:32:81.25:0,81,1009	0/0:26,0:26:66.18:0,66,805	0/0:31,0:31:66.21:0,66,833	0/0:19,0:19:48.15:0,48,606	0/0:24,0:25:63.03:0,63,771	0/0:17,0:17:39.12:0,39,492	0/0:27,0:27:14.71:0,15,652	0/0:19,0:19:48.14:0,48,594	0/0:10,0:10:21.03:0,21,237
chr10	44495445	.	C	CA	552.68	PASS	AB=0.881;AC=3;AF=0.054;AN=56;BaseQRankSum=8.073;DP=655;FS=0.000;HRun=3;HaplotypeScore=73.3318;InbreedingCoeff=-0.0560;MQ=80.77;MQ0=0;MQRankSum=-2.829;QD=6.28;ReadPosRankSum=3.050;VQSLOD=0.5738;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:87.23:0,87,1017	0/1:16,2:18:56.81:57,0,320	0/0:23,0:22:45.13:0,45,533	0/1:18,0:18:14.97:15,0,297	0/0:23,0:23:69.21:0,69,827	0/0:23,0:23:69.17:0,69,792	0/0:30,0:30:90.23:0,90,1045	0/0:35,0:35:90.26:0,90,1059	0/0:17,0:17:51.16:0,51,612	0/0:23,0:23:69.21:0,69,827	0/0:23,0:23:63.16:0,63,723	0/0:21,0:21:63.19:0,63,756	0/0:16,0:16:48.12:0,48,561	0/0:12,0:12:36.11:0,36,432	0/0:30,0:30:84.22:0,84,974	0/0:22,0:22:63.17:0,63,733	0/1:34,18:52:99:580,0,913	0/0:13,0:13:39.09:0,39,443	0/0:25,0:25:63.18:0,63,746	0/0:21,0:21:54.15:0,54,636	0/0:27,0:27:81.23:0,81,959	0/0:23,0:23:63.19:0,63,755	0/0:16,0:16:48.15:0,48,575	0/0:17,0:17:48.11:0,48,550	0/0:24,0:24:66.19:0,66,781	0/0:29,0:29:69.21:0,69,826	0/0:34,0:33:99:0,102,1197	0/0:11,0:11:33.05:0,33,367
chr10	44495612	.	AAAC	A	338.01	PASS	AB=0.714;AC=2;AF=0.036;AN=56;BaseQRankSum=6.778;DP=654;FS=6.813;HRun=0;HaplotypeScore=93.7476;InbreedingCoeff=-0.0372;MQ=77.12;MQ0=0;MQRankSum=-5.950;QD=9.39;ReadPosRankSum=1.013;VQSLOD=2.5959;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:66.23:0,66,1561	0/1:7,4:11:99:175,0,308	0/0:15,0:15:23.30:0,23,885	0/0:13,0:13:36.12:0,36,788	0/0:28,0:28:84.29:0,84,1952	0/0:34,0:34:99:0,99,2328	0/0:21,0:21:63.22:0,63,1468	0/0:45,0:44:99:0,132,3079	0/0:18,0:18:54.19:0,54,1256	0/0:30,0:30:90.31:0,90,2123	0/0:23,0:23:66.23:0,66,1561	0/0:23,0:23:69.24:0,69,1611	0/0:14,0:14:42.14:0,42,989	0/0:16,0:16:48.16:0,48,1088	0/0:34,0:34:99:0,99,2301	0/0:20,0:20:60.21:0,60,1365	0/1:14,11:25:99:252,0,837	0/0:9,0:9:27.08:0,27,592	0/0:24,0:24:72.25:0,72,1695	0/0:40,0:40:99:0,120,2765	0/0:26,0:26:78.27:0,78,1845	0/0:26,0:26:78.25:0,78,1787	0/0:20,0:20:57.20:0,57,1348	0/0:17,0:17:51.18:0,51,1206	0/0:18,0:18:51.18:0,51,1206	0/0:28,0:28:84.29:0,84,1956	0/0:38,0:37:99:0,114,2622	0/0:15,0:15:45.15:0,45,1064
chr10	44495725	.	G	GA	364.54	PASS	AB=0.802;AC=2;AF=0.036;AN=56;BaseQRankSum=6.643;DP=648;FS=3.487;HRun=6;HaplotypeScore=68.2142;InbreedingCoeff=-0.0371;MQ=80.20;MQ0=0;MQRankSum=-2.723;QD=6.29;ReadPosRankSum=1.224;VQSLOD=-0.2447;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:69.14:0,69,703	0/1:9,2:11:48.42:48,0,175	0/0:23,0:23:51.10:0,51,511	0/0:16,0:16:30.03:0,30,294	0/0:29,0:29:78.17:0,78,795	0/0:26,0:26:69.16:0,69,704	0/0:22,0:22:63.14:0,63,643	0/0:42,0:42:99:0,108,1074	0/0:18,0:18:48.11:0,48,490	0/0:23,0:23:63.08:0,63,624	0/0:24,0:24:69.15:0,69,704	0/0:13,0:13:36.08:0,36,367	0/0:26,0:26:66.14:0,66,673	0/0:17,0:17:51.10:0,51,514	0/0:21,0:21:54.10:0,54,544	0/0:21,0:21:54.09:0,54,538	0/1:32,15:47:99:405,0,679	0/0:18,0:18:51.08:0,51,510	0/0:27,0:27:75.17:0,75,765	0/0:23,0:23:63.14:0,63,643	0/0:16,0:16:39.09:0,39,398	0/0:20,0:20:57.13:0,57,581	0/0:25,0:25:63.12:0,63,635	0/0:15,0:15:45.10:0,45,459	0/0:24,0:24:66.14:0,66,667	0/0:28,0:28:84.16:0,84,841	0/0:31,0:31:87.06:0,87,863	0/0:14,0:14:38.66:0,39,397
chr10	44496194	.	GTCTC	G	1381.21	PASS	AB=0.799;AC=27;AF=0.519;AN=52;BaseQRankSum=2.512;DP=563;FS=0.825;HRun=0;HaplotypeScore=91.6483;InbreedingCoeff=0.4582;MQ=75.62;MQ0=12;MQRankSum=-3.528;QD=5.06;ReadPosRankSum=2.205;VQSLOD=1.6417;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:21,7:27:11.64:176,12,0	0/0:6,0:6:3.01:0,3,64	./.	0/0:45,0:24:0:0,0,0	1/1:11,4:14:6.02:91,6,0	0/0:24,0:26:23.28:0,23,334	0/0:14,0:16:2.74:0,3,12	0/0:29,0:29:3.48:0,3,60	0/1:9,1:13:15.87:38,0,16	1/1:15,0:16:3:28,3,0	1/1:16,1:18:6.48:75,6,0	0/0:11,0:18:12.04:0,12,206	0/0:13,0:21:12.04:0,12,192	0/0:9,0:15:2.67:0,3,52	1/1:7,6:13:15.05:232,15,0	1/1:11,0:22:15.37:207,15,0	0/1:14,2:20:99:113,0,116	1/1:21,0:26:8.04:62,8,0	./.	1/1:16,4:20:12.51:178,13,0	1/1:15,2:16:3.01:46,3,0	0/0:23,0:23:19.53:0,20,443	0/0:18,0:18:3.01:0,3,53	0/0:16,0:25:24.08:0,24,459	1/1:17,0:17:3:27,3,0	0/1:16,0:19:7.74:8,0,87	1/1:16,1:20:17.78:222,18,0	1/1:6,1:7:3.01:46,3,0
chr10	44496280	.	T	TACTGCCATGGC	4810.88	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=2.947;DP=528;FS=7.216;HRun=0;HaplotypeScore=176.0732;InbreedingCoeff=0.9987;MQ=83.74;MQ0=0;MQRankSum=-8.807;QD=133.64;ReadPosRankSum=-0.001;VQSLOD=5.2322;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:60.21:0,60,1993	1/1:3,14:17:51.18:2782,51,0	0/0:20,0:20:51.17:0,51,1601	0/0:16,0:16:39.13:0,39,1291	0/0:18,0:18:51.18:0,51,1754	0/0:11,0:11:30.10:0,30,1049	0/0:13,0:13:36.12:0,36,1259	0/0:26,0:26:66.22:0,66,2205	0/0:12,0:12:36.12:0,36,1178	0/0:31,0:31:90.27:0,90,2953	0/0:21,0:21:63.22:0,63,2099	0/0:26,0:26:72.22:0,72,2306	0/0:16,0:16:42.14:0,42,1449	0/0:16,0:16:45.15:0,45,1547	0/0:13,0:13:39.11:0,39,1096	0/0:29,0:29:72.22:0,72,2307	1/1:13,6:19:39.06:2029,39,0	0/0:25,0:25:69.24:0,69,2310	0/0:19,0:19:54.18:0,54,1603	0/0:20,0:20:57.20:0,57,1986	0/0:16,0:16:45.15:0,45,1471	0/0:10,0:10:30.10:0,30,1047	0/0:23,0:23:69.24:0,69,2360	0/0:24,0:24:63.22:0,63,2198	0/0:19,0:19:54.19:0,54,1867	0/0:18,0:18:48.15:0,48,1543	0/0:19,0:19:51.11:0,51,1616	0/0:10,0:10:26.93:0,27,915
chr10	44496357	.	A	ATC	1520.19	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.112;DP=570;FS=3.503;HRun=0;HaplotypeScore=75.7200;InbreedingCoeff=0.9936;MQ=82.57;MQ0=0;MQRankSum=-3.201;QD=44.71;ReadPosRankSum=1.402;VQSLOD=5.0941;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:81.23:0,81,1288	1/1:1,6:7:18.06:365,18,0	0/0:18,0:19:47.22:0,47,794	0/0:14,0:14:39.01:0,39,507	0/0:14,0:14:42.14:0,42,679	0/0:14,0:14:42.14:0,42,680	0/0:34,0:34:99:0,100,1589	0/0:19,0:19:48.16:0,48,779	0/0:21,0:21:57.19:0,57,924	0/0:21,0:21:63.22:0,63,1020	0/0:12,0:12:36.12:0,36,575	0/0:26,0:26:78.24:0,78,1225	0/0:26,0:26:75.24:0,75,1197	0/0:18,0:18:54.18:0,54,854	0/0:25,0:25:75.25:0,75,1195	0/0:25,0:25:75.25:0,75,1194	1/1:6,21:27:65.74:1275,66,0	0/0:27,0:27:81.25:0,81,1276	0/0:14,0:14:41.88:0,42,639	0/0:17,0:17:48.16:0,48,779	0/0:26,0:26:69.20:0,69,1082	0/0:20,0:20:57.18:0,57,901	0/0:14,0:14:39.13:0,39,631	0/0:27,0:27:72.25:0,72,1164	0/0:23,0:23:69.24:0,69,1123	0/0:19,0:19:57.19:0,57,923	0/0:24,0:24:72.23:0,72,1141	0/0:7,0:7:21.07:0,21,342
chr10	44496620	.	GA	G	738.56	PASS	AB=0.690;AC=2;AF=0.036;AN=56;BaseQRankSum=8.459;DP=745;FS=0.746;HRun=1;HaplotypeScore=85.3286;InbreedingCoeff=-0.0371;MQ=82.60;MQ0=0;MQRankSum=-6.283;QD=10.70;ReadPosRankSum=2.476;VQSLOD=1.6927;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,141,2205	0/1:6,6:12:99:162,0,209	0/0:31,0:30:84.26:0,84,1265	0/0:19,0:19:47.64:0,48,638	0/0:30,0:30:84.27:0,84,1318	0/0:24,0:24:69.24:0,69,1103	0/0:32,0:32:93.30:0,93,1464	0/0:25,0:25:75.26:0,75,1198	0/0:24,0:24:69.24:0,69,1102	0/0:28,0:28:84.29:0,84,1342	0/0:17,0:17:51.15:0,51,770	0/0:24,0:24:72.25:0,72,1144	0/0:31,0:31:90.29:0,90,1415	0/0:15,0:15:45.15:0,45,719	0/0:30,0:30:90.31:0,90,1435	0/0:23,0:23:69.22:0,69,1075	0/1:34,23:57:99:666,0,1272	0/0:32,0:32:96.33:0,96,1534	0/0:26,0:26:78.26:0,78,1216	0/0:17,0:17:51.16:0,51,791	0/0:61,0:61:99:0,181,2847	0/0:29,0:29:69.22:0,69,1079	0/0:21,0:21:60.20:0,60,959	0/0:25,0:25:75.24:0,75,1174	0/0:16,0:16:45.15:0,45,719	0/0:27,0:27:81.28:0,81,1295	0/0:13,0:13:39.13:0,39,616	0/0:9,0:9:27.09:0,27,432
chr10	44496741	.	TG	T	3456.74	PASS	AB=0.773;AC=18;AF=0.321;AN=56;BaseQRankSum=0.939;DP=537;FS=1.322;HRun=9;HaplotypeScore=107.9910;InbreedingCoeff=0.8380;MQ=73.46;MQ0=0;MQRankSum=-0.550;QD=16.00;ReadPosRankSum=3.706;VQSLOD=3.5774;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,26:37:43.63:556,44,0	0/1:6,0:15:0.65:15,0,1	0/0:14,0:14:32.95:0,33,348	0/0:16,1:17:2.58:0,3,227	1/1:4,11:15:26.04:225,26,0	0/0:18,0:18:42.11:0,42,475	0/0:32,0:32:71.23:0,71,828	0/0:28,1:29:32.59:0,33,577	0/0:22,0:22:57.14:0,57,634	0/0:16,0:15:27.08:0,27,311	0/0:11,0:11:15.04:0,15,166	0/0:3,0:16:11.53:0,12,77	0/0:10,0:11:15.63:0,16,87	0/0:7,0:12:25.16:0,25,171	0/0:25,1:26:35.72:0,36,664	0/0:21,0:21:51.15:0,51,588	0/1:21,0:23:3.23:3,0,4	0/0:10,0:10:24.07:0,24,276	1/1:3,6:9:18.01:165,18,0	1/1:8,13:21:33.01:302,33,0	1/1:11,32:43:87.03:795,87,0	0/0:7,0:11:2.98:0,3,20	0/0:7,0:7:7.34:0,7,52	0/0:17,0:27:48.26:0,48,297	0/0:21,0:21:54.12:0,54,595	1/1:3,19:22:63.03:573,63,0	1/1:2,17:19:54.03:494,54,0	1/1:1,11:12:36.02:329,36,0
chr10	44496743	.	G	GTGT	650.89	PASS	AB=0.833;AC=3;AF=0.054;AN=56;BaseQRankSum=2.380;DP=523;FS=3.134;HRun=0;HaplotypeScore=147.8091;InbreedingCoeff=0.5595;MQ=70.59;MQ0=0;MQRankSum=-5.039;QD=17.59;ReadPosRankSum=1.461;VQSLOD=3.7047;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:86.43:0,86,991	0/1:12,3:15:99:129,0,106	0/0:13,0:13:36.10:0,36,541	0/0:14,0:14:30.04:0,30,528	0/0:15,0:15:38.29:0,38,407	0/0:19,0:19:51.08:0,51,787	0/0:28,0:28:84.24:0,84,1452	0/0:28,0:28:72.07:0,72,1090	0/0:22,0:22:66.18:0,66,1094	0/0:16,0:15:36.06:0,36,577	0/0:12,0:12:20.99:0,21,329	0/0:16,0:16:15.04:0,15,182	0/0:13,0:13:30.06:0,30,249	0/0:12,0:12:33.03:0,33,342	0/0:26,0:26:78.24:0,78,1317	0/0:19,0:19:57.19:0,57,1027	1/1:8,14:22:9.77:620,10,0	0/0:11,0:11:30.08:0,30,511	0/0:8,0:8:23.41:0,23,228	0/0:20,0:20:39.09:0,39,428	0/0:39,0:39:98.60:0,99,1068	0/0:9,0:9:8.83:0,9,104	0/0:7,0:7:14.96:0,15,121	0/0:27,0:27:63.86:0,64,674	0/0:20,0:20:57.16:0,57,963	0/0:23,0:23:65.53:0,66,688	0/0:18,0:18:54.14:0,54,584	0/0:13,0:13:36.09:0,36,389
chr10	44496830	.	TGAAGG	T	153.54	PASS	AB=0.765;AC=1;AF=0.018;AN=56;BaseQRankSum=-3.365;DP=593;FS=9.174;HRun=0;HaplotypeScore=327.5445;InbreedingCoeff=-0.0275;MQ=61.01;MQ0=0;MQRankSum=-0.102;QD=11.81;ReadPosRankSum=-4.794;VQSLOD=1.0306;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:70.69:0,71,1899	0/1:9,4:13:99:228,0,570	0/0:10,0:10:4.80:0,5,549	0/0:13,0:14:6.83:0,7,630	0/0:23,0:23:66.23:0,66,1452	0/0:30,0:30:84.29:0,84,1901	0/0:33,0:33:79.68:0,80,1967	0/0:23,0:18:34.40:0,34,1023	0/0:25,0:25:71.12:0,71,1597	0/0:34,0:33:79.85:0,80,2172	0/0:15,0:15:45.15:0,45,968	0/0:25,0:25:72.25:0,72,1617	0/0:14,0:14:42.14:0,42,950	0/0:21,0:21:63.22:0,63,1386	0/0:20,0:20:40.17:0,40,1171	0/0:18,0:18:32.32:0,32,1091	0/0:11,0:10:27.09:0,27,572	0/0:13,0:13:39.13:0,39,883	0/0:28,0:28:41.81:0,42,1597	0/0:18,0:18:48.18:0,48,1165	0/0:40,0:39:53.41:0,53,2118	0/0:23,0:23:65.89:0,66,1430	0/0:14,0:14:42.14:0,42,960	0/0:34,0:34:87.28:0,87,1858	0/0:23,0:23:66.23:0,66,1439	0/0:22,0:22:65.79:0,66,1363	0/0:11,0:11:11.05:0,11,591	0/0:8,0:8:24.08:0,24,545
chr10	44496843	.	T	TA	15522.60	PASS	AB=0.933;AC=53;AF=0.946;AN=56;BaseQRankSum=4.801;DP=580;FS=12.730;HRun=1;HaplotypeScore=231.0757;InbreedingCoeff=0.7203;MQ=65.64;MQ0=0;MQRankSum=-7.760;QD=27.67;ReadPosRankSum=3.975;VQSLOD=2.1807;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,28:30:77.68:782,78,0	1/1:0,13:13:38.60:285,39,0	0/1:13,1:14:6.64:7,0,193	0/0:18,0:19:49.51:0,50,303	1/1:4,20:24:40.84:607,41,0	1/1:2,23:25:68.74:724,69,0	1/1:3,25:28:74.78:823,75,0	1/1:6,19:20:56.81:461,57,0	1/1:3,20:23:68.81:736,69,0	1/1:0,36:35:99:1129,107,0	1/1:2,13:15:38.69:363,39,0	1/1:0,26:26:74.81:834,75,0	1/1:0,11:11:32.92:359,33,0	1/1:0,22:22:65.74:658,66,0	1/1:1,18:19:56.78:580,57,0	1/1:3,15:18:50.98:583,51,0	1/1:1,9:9:17.75:119,18,0	1/1:1,12:13:35.96:372,36,0	1/1:4,20:24:65.99:734,66,0	1/1:3,18:21:59.74:644,60,0	1/1:5,36:40:98.64:1038,99,0	1/1:1,20:21:59.87:656,60,0	1/1:0,15:15:44.69:454,45,0	1/1:0,30:30:68.46:782,68,0	1/1:2,19:21:57.05:684,57,0	1/1:3,15:18:51.77:553,52,0	1/1:0,9:9:26.79:261,27,0	1/1:0,9:9:27.02:295,27,0
chr10	44496846	.	TC	T	10772.28	PASS	AB=0.882;AC=53;AF=0.946;AN=56;BaseQRankSum=5.394;DP=585;FS=14.827;HRun=4;HaplotypeScore=246.3901;InbreedingCoeff=0.6183;MQ=68.11;MQ0=0;MQRankSum=-6.874;QD=19.10;ReadPosRankSum=3.219;VQSLOD=1.6676;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,27:31:77.15:607,77,0	1/1:1,12:13:31.81:134,32,0	0/1:13,2:15:21.49:21,0,189	0/0:21,0:21:12.67:0,13,282	1/1:3,20:23:50.40:474,50,0	1/1:3,23:26:71.52:575,72,0	1/1:6,22:28:67.97:551,68,0	1/1:3,22:21:58.33:385,58,0	1/1:5,18:23:56.93:425,57,0	1/1:2,34:36:97.84:768,98,0	1/1:0,14:14:36.07:266,36,0	1/1:4,22:26:62.79:504,63,0	1/1:1,10:11:28.61:227,29,0	1/1:2,22:24:62.54:461,63,0	1/1:2,17:19:54.33:425,54,0	1/1:3,14:17:46.97:409,47,0	1/1:0,9:8:15.73:66,16,0	1/1:1,12:13:34.80:249,35,0	1/1:5,18:23:58.46:476,58,0	1/1:3,18:21:47.90:441,48,0	1/1:9,34:42:98.35:828,98,0	1/1:0,22:22:60.68:512,61,0	1/1:2,14:16:41.73:308,42,0	1/1:4,27:31:53.28:434,53,0	1/1:1,18:19:53.19:495,53,0	1/1:2,16:18:33.35:373,33,0	1/1:0,9:9:24.86:180,25,0	1/1:1,8:9:23.52:178,24,0
chr10	44496876	.	GCAC	G	32.04	PASS	AB=0.722;AC=1;AF=0.018;AN=56;BaseQRankSum=2.185;DP=635;FS=3.567;HRun=0;HaplotypeScore=267.3649;InbreedingCoeff=-0.0193;MQ=77.03;MQ0=0;MQRankSum=-3.265;QD=2.46;ReadPosRankSum=-2.055;VQSLOD=2.2218;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:30:78.18:0,78,1602	0/1:8,5:13:99:106,0,134	0/0:30,0:26:69.10:0,69,1519	0/0:33,0:28:55.57:0,56,1385	0/0:22,0:22:63.22:0,63,1423	0/0:21,0:21:54.19:0,54,1217	0/0:29,0:29:81.28:0,81,1786	0/0:32,0:32:84.29:0,84,1856	0/0:25,0:25:63.22:0,63,1422	0/0:29,0:28:69.11:0,69,1402	0/0:10,0:10:27.09:0,27,611	0/0:17,0:17:37.20:0,37,1014	0/0:11,0:11:33.10:0,33,670	0/0:26,0:26:72.24:0,72,1561	0/0:20,0:20:45.14:0,45,975	0/0:20,0:20:51.18:0,51,1154	0/0:9,1:9:12.04:0,12,270	0/0:18,0:18:37.21:0,37,878	0/0:26,0:26:78.26:0,78,1722	0/0:23,0:23:63.21:0,63,1380	0/0:57,0:56:99:0,143,3099	0/0:23,0:23:62.21:0,62,1276	0/0:15,0:15:45.15:0,45,1016	0/0:31,0:31:66.14:0,66,1371	0/0:22,0:22:63.22:0,63,1405	0/0:17,0:17:48.16:0,48,1086	0/0:12,0:12:36.11:0,36,747	0/0:11,0:11:30.10:0,30,675
chr10	44496898	.	A	AACAC	1843.50	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=0.382;DP=653;FS=4.897;HRun=0;HaplotypeScore=238.9295;InbreedingCoeff=0.8178;MQ=58.17;MQ0=5;MQRankSum=-2.109;QD=11.31;ReadPosRankSum=0.797;VQSLOD=2.4142;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:37:41.71:0,42,829	0/0:9,0:9:0.47:0,0,1	0/0:28,0:13:6.02:0,6,84	0/0:27,0:18:11.45:0,11,136	0/0:23,0:24:45.09:0,45,663	0/0:24,0:25:44.92:0,45,731	0/0:21,0:22:39.11:0,39,578	1/1:18,0:18:0.47:1,0,0	0/0:20,0:22:42.13:0,42,639	0/0:24,0:25:43.67:0,44,545	0/0:8,0:8:5.83:0,6,88	1/1:11,7:18:12.04:218,12,0	1/1:4,2:6:6.02:145,6,0	1/1:17,10:27:17.80:306,18,0	0/0:22,0:23:22.58:0,23,348	0/0:18,0:19:25.38:0,25,345	1/1:9,0:9:2.94:18,3,0	0/0:21,0:21:20.86:0,21,203	0/0:30,0:31:28.14:0,28,589	0/0:32,0:31:54.14:0,54,804	0/0:59,0:60:98.70:0,99,1393	1/1:20,12:35:35.09:667,35,0	1/1:7,6:15:9.58:288,10,0	1/1:22,12:35:8.93:377,9,0	0/0:21,0:21:27.05:0,27,309	0/0:25,0:26:30:0,30,590	0/0:19,0:20:33.10:0,33,515	0/0:8,0:8:10.94:0,11,209
chr10	44496933	.	G	GCA	1935.03	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=11.622;DP=701;FS=11.925;HRun=0;HaplotypeScore=182.5848;InbreedingCoeff=0.4537;MQ=50.37;MQ0=7;MQRankSum=-1.997;QD=6.37;ReadPosRankSum=-0.762;VQSLOD=2.4183;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:44:69.71:0,70,1002	1/1:6,0:6:2.22:7,2,0	0/0:28,0:11:23.90:0,24,256	0/0:31,0:9:20.74:0,21,223	0/0:31,0:32:78.44:0,78,860	0/0:21,0:21:53.99:0,54,629	0/0:22,0:22:42.09:0,42,476	1/1:7,15:21:47.70:498,48,0	0/0:25,0:26:56.16:0,56,602	1/1:20,1:21:47.54:468,48,0	1/1:12,0:12:6.01:65,6,0	0/1:22,0:22:18.86:34,0,19	0/1:8,0:8:2.34:2,0,17	0/1:26,0:26:26.06:26,0,88	1/1:26,0:26:5.19:240,5,0	1/1:17,0:17:12.01:117,12,0	0/1:5,0:5:3.06:3,0,18	1/1:24,0:24:5.41:362,5,0	0/0:33,0:31:57.73:0,58,636	0/0:27,0:28:54.58:0,55,609	0/0:63,0:62:99:0,117,1357	0/1:36,0:36:24.74:25,0,62	0/1:21,0:22:6.95:7,0,30	0/1:37,0:37:21.47:21,0,28	1/1:20,0:20:24.01:247,24,0	0/0:31,0:32:81.11:0,81,941	0/0:21,0:21:55.63:0,56,590	0/0:14,0:14:33.09:0,33,390
chr10	44496948	.	C	CACAG	7716.76	PASS	AB=0.937;AC=32;AF=0.571;AN=56;BaseQRankSum=-3.154;DP=762;FS=2.315;HRun=0;HaplotypeScore=191.3951;InbreedingCoeff=0.1537;MQ=55.29;MQ0=7;MQRankSum=-0.161;QD=14.29;ReadPosRankSum=-1.818;VQSLOD=4.0690;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:48,0:49:63.89:64,0,636	1/1:9,0:9:6.09:34,6,0	0/0:40,0:16:46.49:0,46,587	0/0:47,0:21:47.35:0,47,536	0/1:34,0:34:74.93:75,0,530	0/0:23,0:23:57:0,57,990	0/0:22,0:22:54.07:0,54,798	0/1:33,0:28:99:130,0,181	0/0:23,0:23:63.11:0,63,1011	1/1:4,20:25:65.30:1234,65,0	1/1:0,13:16:6.02:167,6,0	1/1:10,0:21:27:623,27,0	1/1:8,0:10:2.30:280,2,0	0/1:14,0:23:31.02:416,0,31	1/1:3,23:28:2.30:612,2,0	1/1:2,16:19:11.79:255,12,0	0/0:8,0:7:2.74:0,3,29	1/1:4,21:27:13.72:952,14,0	0/1:34,0:33:99:158,0,296	0/1:27,0:27:38.02:38,0,350	0/0:56,0:56:3.14:0,3,848	1/1:22,0:40:41.83:785,42,0	1/1:16,0:24:21.10:473,21,0	0/1:15,0:30:3.96:570,0,4	1/1:3,15:19:24.08:654,24,0	0/1:35,0:35:99:119,0,491	0/1:22,0:22:44.91:45,0,355	0/1:15,0:15:31.95:32,0,248
chr10	44497002	.	GAC	G	358.41	PASS	AB=0.681;AC=2;AF=0.036;AN=56;BaseQRankSum=6.561;DP=701;FS=9.420;HRun=0;HaplotypeScore=149.5852;InbreedingCoeff=-0.0371;MQ=68.52;MQ0=4;MQRankSum=-5.904;QD=11.56;ReadPosRankSum=-3.259;VQSLOD=1.8583;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,120,2136	0/1:7,12:19:99:355,0,272	0/0:36,0:27:59.15:0,59,992	0/0:40,0:27:47:0,47,857	0/0:27,0:27:81.28:0,81,1553	0/0:28,0:28:84.27:0,84,1546	0/0:23,0:23:69.19:0,69,1218	0/0:41,0:40:99:0,111,1902	0/0:24,0:24:72.25:0,72,1388	0/0:14,0:14:36.12:0,36,683	0/0:21,0:21:57.16:0,57,1009	0/0:18,0:18:51.17:0,51,957	0/0:24,0:24:69.24:0,69,1295	0/0:22,0:22:57.17:0,57,1014	0/0:28,0:28:45.12:0,45,794	0/0:17,0:17:29.94:0,30,578	0/1:8,4:11:92.48:92,0,271	0/0:20,0:20:38.98:0,39,602	0/0:38,0:37:99:0,105,1762	0/0:19,0:19:57.20:0,57,1076	0/0:23,0:23:62.91:0,63,1088	0/0:22,0:22:63.20:0,63,1179	0/0:18,0:18:44.71:0,45,743	0/0:26,0:26:66.04:0,66,1152	0/0:15,0:15:24.08:0,24,462	0/0:29,0:29:83.09:0,83,1550	0/0:28,0:28:84.25:0,84,1546	0/0:22,0:22:62.99:0,63,1137
chr10	44497013	.	A	ACAT	858.90	PASS	AB=0.797;AC=3;AF=0.054;AN=56;BaseQRankSum=6.793;DP=676;FS=7.841;HRun=0;HaplotypeScore=149.9405;InbreedingCoeff=-0.0469;MQ=69.87;MQ0=1;MQRankSum=-3.481;QD=15.34;ReadPosRankSum=-2.914;VQSLOD=2.4355;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,132,2366	0/1:7,12:19:99:757,0,237	0/0:22,0:20:31.89:0,32,632	0/1:23,0:19:0.09:0,0,530	0/0:27,0:27:78.27:0,78,1419	0/0:26,0:26:78.27:0,78,1451	0/0:22,0:22:63.22:0,63,1170	0/0:39,0:38:99:0,102,1630	0/0:28,0:28:81.26:0,81,1476	0/0:16,0:16:39.13:0,39,701	0/0:25,0:25:69.22:0,69,1247	0/0:26,0:26:65.61:0,66,880	0/0:24,0:24:66.21:0,66,880	0/0:19,0:19:54.15:0,54,663	0/0:29,0:29:54.18:0,54,1000	0/0:20,0:20:39.02:0,39,714	0/1:10,3:13:99:191,0,321	0/0:17,0:17:33.11:0,33,576	0/0:37,0:37:99:0,108,1907	0/0:23,0:23:69.24:0,69,1248	0/0:18,0:18:54.14:0,54,911	0/0:21,0:21:60.19:0,60,788	0/0:21,0:21:43.31:0,43,631	0/0:24,0:24:59.21:0,59,800	0/0:16,0:16:36.12:0,36,669	0/0:25,0:25:72.24:0,72,1311	0/0:29,0:29:87.30:0,87,1616	0/0:18,0:18:33.75:0,34,930
chr10	44497016	.	T	TA	3055.88	PASS	AB=0.889;AC=17;AF=0.304;AN=56;BaseQRankSum=0.578;DP=684;FS=1.236;HRun=10;HaplotypeScore=118.6468;InbreedingCoeff=0.9115;MQ=69.70;MQ0=1;MQRankSum=-1.392;QD=16.43;ReadPosRankSum=0.119;VQSLOD=3.0785;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:50:99:0,119,943	1/1:19,0:19:24.05:127,24,0	0/0:19,0:17:16.92:0,17,187	0/0:20,0:18:29.83:0,30,220	0/0:27,0:27:38.71:0,39,462	0/0:26,0:27:67.94:0,68,548	0/0:20,0:22:51.98:0,52,401	0/0:40,0:39:45.69:0,46,248	0/0:27,0:27:62.78:0,63,508	0/0:18,0:18:47.84:0,48,380	0/0:25,0:26:52.94:0,53,424	1/1:8,19:29:20.26:404,20,0	1/1:6,20:26:54.13:571,54,0	1/1:1,17:18:42.11:448,42,0	0/0:28,0:29:55.96:0,56,446	0/0:19,0:20:38.88:0,39,303	1/1:14,0:13:19.16:93,19,0	0/1:12,2:16:32.92:33,0,153	0/0:36,0:37:84.89:0,85,668	0/0:23,0:23:57.38:0,57,469	0/0:17,0:17:38.92:0,39,315	1/1:0,17:19:53.89:533,54,0	1/1:4,17:21:42.11:448,42,0	1/1:4,20:24:57.14:607,57,0	0/0:18,0:18:29.95:0,30,246	0/0:25,0:25:59.82:0,60,484	0/0:30,0:30:77.79:0,78,628	0/0:22,0:22:47.41:0,47,390
chr10	44497026	.	A	AAC	458.95	PASS	AB=0.789;AC=3;AF=0.054;AN=56;BaseQRankSum=4.495;DP=684;FS=1.729;HRun=0;HaplotypeScore=124.9382;InbreedingCoeff=-0.0570;MQ=72.79;MQ0=1;MQRankSum=-1.400;QD=7.52;ReadPosRankSum=-3.158;VQSLOD=3.1087;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,141,1816	0/1:15,5:22:99:247,0,320	0/0:22,0:21:36.37:0,36,487	0/0:18,0:16:39.37:0,39,397	0/0:26,0:26:71.85:0,72,909	0/0:28,0:28:81.20:0,81,1042	0/0:21,0:21:60.09:0,60,738	0/0:38,0:37:96.01:0,96,1139	0/0:27,0:27:78.16:0,78,987	0/0:18,0:18:48.15:0,48,661	0/0:24,0:24:69.16:0,69,866	0/0:27,0:27:22.30:0,22,211	0/0:26,0:26:54.43:0,54,244	0/0:19,0:19:34.96:0,35,127	0/0:29,0:29:63.17:0,63,826	0/0:22,0:22:51.06:0,51,630	0/1:6,11:16:99:293,0,101	0/0:17,0:17:30.82:0,31,349	0/0:33,0:33:96.18:0,96,1205	0/0:22,0:22:63.13:0,63,838	0/0:18,0:18:51.09:0,51,635	0/1:22,0:22:19.10:19,0,132	0/0:22,0:22:35.72:0,36,183	0/0:21,0:22:15.61:0,16,126	0/0:16,0:16:39.03:0,39,486	0/0:25,0:25:72.17:0,72,929	0/0:33,0:33:96.02:0,96,1189	0/0:21,0:21:63.16:0,63,794
chr10	44497595	.	GT	G	1398.94	PASS	AB=0.659;AC=2;AF=0.036;AN=56;BaseQRankSum=8.923;DP=816;FS=7.646;HRun=3;HaplotypeScore=115.8715;InbreedingCoeff=-0.0370;MQ=82.32;MQ0=0;MQRankSum=-3.119;QD=15.04;ReadPosRankSum=0.511;VQSLOD=2.7509;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,138,1917	0/1:13,14:27:99:404,0,483	0/0:19,0:19:44.33:0,44,580	0/0:27,0:27:65.93:0,66,880	0/0:36,0:36:99:0,108,1518	0/0:20,0:20:60.19:0,60,847	0/0:33,0:33:99:0,99,1425	0/0:32,0:32:93.31:0,93,1339	0/0:26,0:26:72.24:0,72,1018	0/0:38,0:38:99:0,111,1583	0/0:16,0:16:45.15:0,45,648	0/0:30,0:30:90.29:0,90,1280	0/0:27,0:27:81.26:0,81,1147	0/0:29,0:29:87.28:0,87,1234	0/0:20,0:20:60.20:0,60,864	0/0:20,0:20:57.19:0,57,821	0/1:32,34:66:99:1084,0,898	0/0:40,0:40:99:0,117,1620	0/0:20,0:20:57.18:0,57,801	0/0:23,0:23:66.22:0,66,946	0/0:44,0:44:99:0,132,1881	0/0:28,0:28:84.23:0,84,1151	0/0:27,0:27:81.26:0,81,1148	0/0:14,0:14:39.13:0,39,562	0/0:38,0:38:99:0,108,1534	0/0:18,0:18:54.18:0,54,778	0/0:27,0:27:81.26:0,81,1149	0/0:24,0:24:72.24:0,72,1037
chr10	44497803	.	AT	A	543.77	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.677;DP=625;FS=7.468;HRun=6;HaplotypeScore=76.1120;InbreedingCoeff=0.9836;MQ=70.25;MQ0=0;MQRankSum=-7.099;QD=14.70;ReadPosRankSum=-0.332;VQSLOD=2.9274;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,111,1445	1/1:1,6:7:12.03:129,12,0	0/0:21,0:22:60.12:0,60,712	0/0:15,0:15:42.04:0,42,464	0/0:22,0:22:66.21:0,66,868	0/0:21,0:21:57.19:0,57,749	0/0:23,0:23:63.20:0,63,829	0/0:3,0:29:77.79:0,78,415	0/0:22,0:22:63.20:0,63,816	0/0:24,0:24:72.15:0,72,910	0/0:17,0:17:51.17:0,51,669	0/0:30,0:30:90.29:0,90,1178	0/0:19,0:19:51.12:0,51,651	0/0:21,0:21:60.19:0,60,788	0/0:24,0:24:69.22:0,69,908	0/0:25,0:25:72.23:0,72,947	1/1:6,24:30:49.67:532,50,0	0/0:30,0:30:87.23:0,87,1124	0/0:23,0:23:69.20:0,69,879	0/0:16,0:16:45.14:0,45,578	0/0:31,0:31:87.28:0,87,1144	0/0:16,0:16:45.14:0,45,578	0/0:12,0:12:33.11:0,33,434	0/0:39,0:39:99:0,117,1537	0/0:15,0:15:45.15:0,45,592	0/0:21,0:21:63.20:0,63,814	0/0:23,0:23:66.20:0,66,848	0/0:11,0:11:33.11:0,33,434
chr10	44497877	.	CAT	C	362.82	PASS	AB=0.824;AC=3;AF=0.054;AN=56;BaseQRankSum=7.100;DP=721;FS=0.000;HRun=0;HaplotypeScore=97.1414;InbreedingCoeff=-0.0572;MQ=71.87;MQ0=0;MQRankSum=-4.210;QD=4.84;ReadPosRankSum=-0.621;VQSLOD=2.7445;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,121,2231	0/1:11,9:20:99:246,0,532	0/0:23,0:21:14.59:0,15,794	0/1:23,1:21:22.55:23,0,471	0/0:25,0:25:75.24:0,75,1391	0/0:27,0:27:81.28:0,81,1554	0/0:27,0:27:81.23:0,81,1441	0/0:28,0:28:84.26:0,84,1507	0/0:33,0:33:99:0,99,1823	0/0:35,0:35:99:0,102,1866	0/0:24,0:24:69.24:0,69,1331	0/0:29,0:29:84.27:0,84,1566	0/0:18,0:18:54.17:0,54,999	0/0:19,0:19:57.15:0,57,1062	0/0:23,0:23:69.19:0,69,1197	0/0:25,0:25:72.23:0,72,1339	0/1:25,5:30:99:194,0,986	0/0:38,0:38:99:0,108,1996	0/0:14,0:14:39.13:0,39,753	0/0:27,0:27:81.28:0,81,1536	0/0:14,0:14:42.14:0,42,792	0/0:20,0:20:60.21:0,60,1138	0/0:24,0:24:72.22:0,72,1277	0/0:27,0:27:81.28:0,81,1561	0/0:28,0:28:84.24:0,84,1514	0/0:28,0:28:81.27:0,81,1501	0/0:31,0:31:93.31:0,93,1741	0/0:17,0:17:51.17:0,51,973
chr10	44498187	.	T	TCTGG	2434.38	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.257;DP=539;FS=5.280;HRun=0;HaplotypeScore=106.1358;InbreedingCoeff=0.9648;MQ=98.12;MQ0=1;MQRankSum=-9.791;QD=54.10;ReadPosRankSum=0.600;VQSLOD=4.5396;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:32:96.33:0,96,1804	1/1:3,9:15:36.12:873,36,0	0/0:26,0:26:72.23:0,72,1306	0/0:31,0:31:78.14:0,78,1304	0/0:13,0:13:33.11:0,33,627	0/0:22,0:22:57.20:0,57,1082	0/0:24,0:24:63.20:0,63,1154	0/0:36,0:36:87.27:0,87,1561	0/0:18,0:18:51.15:0,51,934	0/0:11,0:11:24.08:0,24,452	0/0:5,0:5:12.04:0,12,228	0/0:22,0:22:66.23:0,66,1243	0/0:20,0:20:60.19:0,60,1107	0/0:17,0:17:48.16:0,48,908	0/0:20,0:20:57.20:0,57,1082	0/0:20,0:20:60.19:0,60,1104	1/1:8,15:30:69.24:1683,69,0	0/0:17,0:17:51.17:0,51,968	0/0:15,0:15:45.15:0,45,851	0/0:8,0:8:21.07:0,21,399	0/0:27,0:26:69.02:0,69,1272	0/0:5,0:5:15.04:0,15,254	0/0:5,0:5:15.04:0,15,253	0/0:23,0:23:69.24:0,69,1291	0/0:10,0:10:27.08:0,27,482	0/0:25,0:25:66.22:0,66,1220	0/0:31,0:31:90.29:0,90,1659	0/0:10,0:10:30.09:0,30,529
chr10	44498358	.	G	GTTAA	497.79	PASS	AB=0.792;AC=2;AF=0.036;AN=56;BaseQRankSum=5.555;DP=586;FS=6.664;HRun=0;HaplotypeScore=112.3865;InbreedingCoeff=-0.0370;MQ=82.69;MQ0=0;MQRankSum=-5.488;QD=9.76;ReadPosRankSum=2.247;VQSLOD=2.4100;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:78.25:0,78,1572	0/1:7,4:11:99:171,0,201	0/0:23,0:23:69.23:0,69,1405	0/0:16,0:16:44.81:0,45,851	0/0:22,0:22:66.23:0,66,1383	0/0:19,0:19:57.20:0,57,1194	0/0:19,0:19:57.20:0,57,1179	0/0:29,0:29:84.28:0,84,1684	0/0:25,0:25:72.25:0,72,1488	0/0:25,0:25:72.24:0,72,1471	0/0:18,0:18:54.19:0,54,1129	0/0:16,0:16:48.16:0,48,986	0/0:16,0:16:48.15:0,48,942	0/0:15,0:15:42.12:0,42,835	0/0:22,0:22:66.23:0,66,1383	0/0:20,0:20:60.21:0,60,1257	0/1:33,7:40:99:416,0,1245	0/0:21,0:21:60.21:0,60,1258	0/0:16,0:16:48.16:0,48,997	0/0:21,0:21:63.22:0,63,1304	0/0:19,0:19:53.86:0,54,1113	0/0:17,0:17:51.18:0,51,1069	0/0:19,0:19:57.20:0,57,1195	0/0:21,0:21:60.21:0,60,1255	0/0:30,0:30:90.31:0,90,1886	0/0:22,0:22:66.23:0,66,1379	0/0:17,0:17:51.18:0,51,1065	0/0:20,0:20:60.17:0,60,1178
chr10	44498359	.	C	CAAG	195.81	PASS	AB=0.792;AC=2;AF=0.036;AN=56;BaseQRankSum=5.402;DP=586;FS=4.819;HRun=0;HaplotypeScore=101.5263;InbreedingCoeff=-0.0370;MQ=82.56;MQ0=0;MQRankSum=-5.300;QD=3.84;ReadPosRankSum=2.962;VQSLOD=1.8548;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:72.22:0,72,1230	0/1:7,4:11:96.16:96,0,187	0/0:23,0:23:69.24:0,69,1202	0/0:15,0:15:38.16:0,38,620	0/0:22,0:22:66.23:0,66,1164	0/0:19,0:19:57.20:0,57,1006	0/0:19,0:19:54.18:0,54,953	0/0:30,0:30:84.28:0,84,1441	0/0:25,0:25:75.24:0,75,1295	0/0:25,0:25:75.24:0,75,1289	0/0:19,0:19:54.18:0,54,950	0/0:16,0:16:45.14:0,45,765	0/0:15,0:15:45.15:0,45,792	0/0:15,0:15:45.14:0,45,757	0/0:22,0:22:66.23:0,66,1164	0/0:20,0:20:60.21:0,60,1059	0/1:33,7:40:99:189,0,1068	0/0:21,0:21:60.21:0,60,1059	0/0:16,0:16:48.16:0,48,813	0/0:21,0:21:60.21:0,60,1049	0/0:19,0:19:54.12:0,54,952	0/0:17,0:17:51.17:0,51,899	0/0:19,0:19:57.20:0,57,1006	0/0:21,0:21:63.20:0,63,1073	0/0:30,0:30:90.31:0,90,1588	0/0:22,0:22:66.22:0,66,1139	0/0:18,0:18:51.16:0,51,870	0/0:20,0:20:60.21:0,60,1040
chr10	44498363	.	T	TCTCA	321.63	PASS	AB=0.786;AC=2;AF=0.036;AN=56;BaseQRankSum=5.661;DP=579;FS=6.596;HRun=0;HaplotypeScore=112.2600;InbreedingCoeff=-0.0375;MQ=83.96;MQ0=0;MQRankSum=-4.551;QD=6.19;ReadPosRankSum=2.191;VQSLOD=1.5899;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:69.22:0,69,1407	0/1:6,4:10:99:134,0,217	0/0:23,0:23:68.72:0,69,1372	0/0:13,0:13:16.16:0,16,612	0/0:23,0:23:69.24:0,69,1427	0/0:21,0:21:63.19:0,63,1244	0/0:18,0:18:54.17:0,54,1095	0/0:29,0:29:84.29:0,84,1636	0/0:27,0:27:81.28:0,81,1667	0/0:25,0:25:75.26:0,75,1565	0/0:17,0:17:51.16:0,51,1031	0/0:15,0:15:45.15:0,45,926	0/0:16,0:16:48.14:0,48,931	0/0:15,0:15:45.15:0,45,943	0/0:22,0:22:66.23:0,66,1369	0/0:20,0:20:60.21:0,60,1259	0/1:35,7:42:99:276,0,1180	0/0:21,0:21:63.22:0,63,1315	0/0:13,0:13:39.13:0,39,806	0/0:17,0:17:51.18:0,51,1056	0/0:21,0:21:60.19:0,60,1205	0/0:15,0:15:45.15:0,45,944	0/0:21,0:21:63.22:0,63,1293	0/0:21,0:21:63.20:0,63,1265	0/0:31,0:31:93.30:0,93,1896	0/0:24,0:24:69.21:0,69,1339	0/0:16,0:16:48.16:0,48,990	0/0:20,0:20:60.21:0,60,1258
chr10	44498364	.	G	GTAC	677.46	PASS	AB=0.872;AC=3;AF=0.054;AN=56;BaseQRankSum=8.068;DP=588;FS=4.291;HRun=0;HaplotypeScore=111.5892;InbreedingCoeff=-0.0474;MQ=83.32;MQ0=0;MQRankSum=-7.262;QD=8.80;ReadPosRankSum=0.713;VQSLOD=3.1687;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:69.24:0,69,1267	0/1:7,4:11:99:144,0,176	0/0:23,0:23:69.23:0,69,1245	0/1:13,0:13:0.56:1,0,560	0/0:23,0:23:69.24:0,69,1283	0/0:21,0:21:63.22:0,63,1160	0/0:17,0:17:51.17:0,51,951	0/0:29,0:29:87.28:0,87,1555	0/0:27,0:27:81.28:0,81,1510	0/0:26,0:26:75.23:0,75,1365	0/0:16,0:16:48.16:0,48,895	0/0:15,0:15:45.15:0,45,832	0/0:15,0:15:45.15:0,45,824	0/0:15,0:15:45.15:0,45,836	0/0:22,0:22:66.21:0,66,1183	0/0:20,0:20:60.21:0,60,1119	0/1:46,7:53:99:622,0,976	0/0:21,0:21:63.22:0,63,1164	0/0:13,0:13:36.12:0,36,670	0/0:17,0:17:51.16:0,51,920	0/0:22,0:22:60.14:0,60,1109	0/0:15,0:15:45.15:0,45,839	0/0:21,0:21:63.22:0,63,1174	0/0:20,0:20:60.21:0,60,1118	0/0:30,0:30:90.31:0,90,1678	0/0:24,0:24:66.23:0,66,1223	0/0:16,0:16:48.15:0,48,863	0/0:20,0:20:60.21:0,60,1119
chr10	44498813	.	T	TG	1688.30	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=11.867;DP=649;FS=12.278;HRun=4;HaplotypeScore=82.7634;InbreedingCoeff=0.9907;MQ=82.20;MQ0=0;MQRankSum=-2.374;QD=21.10;ReadPosRankSum=1.223;VQSLOD=2.2170;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,120,1346	1/1:1,9:12:26.75:315,27,0	0/0:21,0:22:52.09:0,52,560	0/0:24,0:24:59.66:0,60,709	0/0:21,0:21:57.16:0,57,646	0/0:20,0:20:60.17:0,60,681	0/0:17,0:17:45.13:0,45,510	0/0:34,0:34:93.26:0,93,1055	0/0:16,0:16:45.11:0,45,500	0/0:19,0:19:54.15:0,54,606	0/0:12,0:12:36.10:0,36,408	0/0:21,0:21:60.15:0,60,669	0/0:21,0:21:60.17:0,60,680	0/0:18,0:18:51.11:0,51,557	0/0:29,0:29:72.15:0,72,786	0/0:17,0:17:48.14:0,48,543	1/1:12,31:68:99:1495,143,0	0/0:18,0:18:54.15:0,54,613	0/0:22,0:22:66.16:0,66,730	0/0:23,0:23:63.18:0,63,714	0/0:30,0:30:87.22:0,87,974	0/0:17,0:17:48.14:0,48,545	0/0:11,0:11:27.08:0,27,306	0/0:34,0:34:99:0,99,1111	0/0:24,0:24:63.18:0,63,714	0/0:24,0:24:66.19:0,66,749	0/0:27,0:27:69.18:0,69,772	0/0:5,0:5:15.04:0,15,170
chr10	44499073	.	GA	G	6435.30	PASS	AB=0.650;AC=26;AF=0.464;AN=56;BaseQRankSum=8.578;DP=651;FS=0.000;HRun=9;HaplotypeScore=91.8984;InbreedingCoeff=0.8552;MQ=70.60;MQ0=0;MQRankSum=1.245;QD=20.56;ReadPosRankSum=3.149;VQSLOD=5.2126;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:31:75.21:0,75,855	0/1:4,7:13:30.45:135,0,30	0/0:24,0:21:19.23:0,19,310	0/0:15,0:14:32.90:0,33,314	0/0:34,0:34:93.28:0,93,1073	0/0:29,0:32:83.90:0,84,920	0/0:22,0:22:60.17:0,60,684	0/0:5,0:26:59.31:0,59,309	0/0:18,1:19:23.68:0,24,518	1/1:1,22:23:66.03:604,66,0	1/1:2,19:21:57.03:522,57,0	1/1:1,19:20:48.02:439,48,0	1/1:2,23:25:66.03:604,66,0	1/1:4,13:17:39.02:357,39,0	1/1:1,24:25:69.04:631,69,0	1/1:5,22:27:66.03:604,66,0	0/1:9,21:39:94.78:355,0,95	1/1:6,20:26:48.83:511,49,0	0/0:14,0:14:39.09:0,39,431	0/0:25,0:25:60.17:0,60,684	0/0:13,0:13:36.09:0,36,406	1/1:1,15:16:38.93:357,39,0	1/1:3,19:22:50.79:466,51,0	1/1:1,14:15:39.02:357,39,0	1/1:1,23:24:54.03:494,54,0	0/0:24,1:25:44.75:0,45,769	0/0:39,0:37:99:0,108,1235	0/0:17,0:17:39.10:0,39,439
chr10	44499113	.	C	CCT	697.85	PASS	AB=0.769;AC=2;AF=0.036;AN=56;BaseQRankSum=5.131;DP=709;FS=4.904;HRun=0;HaplotypeScore=115.1032;InbreedingCoeff=-0.0370;MQ=82.68;MQ0=0;MQRankSum=-5.588;QD=12.46;ReadPosRankSum=-0.449;VQSLOD=2.9490;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:93.32:0,93,1422	0/1:12,5:17:99:195,0,275	0/0:29,0:29:84.27:0,84,1238	0/0:27,0:27:70.92:0,71,1011	0/0:26,0:26:78.26:0,78,1195	0/0:23,0:23:66.22:0,66,1005	0/0:18,0:18:54.18:0,54,822	0/0:33,0:33:96.32:0,96,1447	0/0:23,0:23:63.20:0,63,939	0/0:29,0:29:84.28:0,84,1265	0/0:20,0:20:57.19:0,57,867	0/0:25,0:25:66.22:0,66,1011	0/0:27,0:27:75.23:0,75,1125	0/0:18,0:18:48.16:0,48,730	0/0:26,0:26:72.24:0,72,1096	0/0:33,0:33:96.31:0,96,1432	0/1:27,12:39:99:592,0,865	0/0:29,0:29:84.27:0,84,1264	0/0:21,0:21:60.18:0,60,880	0/0:25,0:25:75.25:0,75,1136	0/0:21,0:21:63.21:0,63,958	0/0:21,0:21:60.20:0,60,913	0/0:20,0:20:60.20:0,60,918	0/0:23,0:23:66.20:0,66,970	0/0:26,0:26:63.19:0,63,926	0/0:28,0:28:81.28:0,81,1240	0/0:32,0:30:96.32:0,96,1443	0/0:18,0:18:54.18:0,54,821
chr10	44499522	.	A	AG	2158.84	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=10.233;DP=689;FS=1.827;HRun=0;HaplotypeScore=88.2967;InbreedingCoeff=0.9999;MQ=80.05;MQ0=0;MQRankSum=-3.286;QD=39.98;ReadPosRankSum=-0.358;VQSLOD=3.7760;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,129,1767	1/1:1,14:15:42.14:660,42,0	0/0:14,0:14:39.13:0,39,540	0/0:22,0:22:41.57:0,42,729	0/0:24,0:24:69.23:0,69,963	0/0:25,0:25:72.20:0,72,973	0/0:33,0:33:99:0,99,1351	0/0:33,0:33:96.30:0,96,1311	0/0:21,0:21:63.20:0,63,866	0/0:20,0:20:60.20:0,60,839	0/0:16,0:16:48.15:0,48,654	0/0:26,0:26:75.21:0,75,1012	0/0:34,0:34:99:0,99,1382	0/0:25,0:25:75.22:0,75,1014	0/0:19,0:19:57.18:0,57,780	0/0:17,0:17:51.17:0,51,713	1/1:4,35:39:99:1621,102,0	0/0:21,0:21:60.20:0,60,838	0/0:19,0:19:57.19:0,57,792	0/0:25,0:25:72.24:0,72,1004	0/0:36,0:36:99:0,105,1469	0/0:25,0:25:75.25:0,75,1047	0/0:16,0:16:45.15:0,45,629	0/0:24,0:24:72.23:0,72,989	0/0:18,0:18:54.17:0,54,740	0/0:27,0:27:78.26:0,78,1091	0/0:30,0:29:90.30:0,90,1259	0/0:21,0:21:60.20:0,60,839
chr10	44499708	.	GT	G	316.27	PASS	AB=0.724;AC=2;AF=0.036;AN=56;BaseQRankSum=5.140;DP=524;FS=0.993;HRun=3;HaplotypeScore=69.0070;InbreedingCoeff=-0.0495;MQ=97.97;MQ0=0;MQRankSum=-2.795;QD=6.45;ReadPosRankSum=1.437;VQSLOD=0.5135;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:41:99:0,120,1687	0/1:3,2:5:33.23:65,0,33	0/0:28,0:28:78.20:0,78,1041	0/0:27,0:27:72.18:0,72,938	0/0:8,0:8:18.06:0,18,259	0/0:13,0:13:36.11:0,36,501	0/0:23,0:23:69.20:0,69,953	0/0:29,0:29:84.24:0,84,1149	0/0:25,0:25:66.15:0,66,907	0/0:14,0:14:42.13:0,42,581	0/0:3,0:3:6.02:0,6,86	0/0:33,0:33:99:0,99,1323	0/0:17,0:17:51.17:0,51,732	0/0:36,0:36:99:0,102,1423	0/0:21,0:21:60.18:0,60,843	0/0:18,0:18:54.17:0,54,759	0/1:28,16:44:99:340,0,1018	0/0:13,0:13:36.09:0,36,495	0/0:13,0:13:39.12:0,39,539	0/0:3,0:3:9.03:0,9,129	0/0:27,0:27:78.20:0,78,1062	0/0:6,0:6:18.02:0,18,236	0/0:2,0:2:5.98:0,6,63	0/0:31,0:31:93.29:0,93,1298	0/0:3,0:3:9.03:0,9,130	0/0:11,0:11:30.10:0,30,431	0/0:21,0:21:63.20:0,63,888	0/0:8,0:8:24.08:0,24,341
chr10	44499845	.	ATTG	A	695.79	PASS	AB=0.619;AC=2;AF=0.036;AN=56;BaseQRankSum=6.484;DP=424;FS=4.972;HRun=0;HaplotypeScore=66.4502;InbreedingCoeff=-0.0374;MQ=92.73;MQ0=0;MQRankSum=-2.012;QD=20.46;ReadPosRankSum=2.160;VQSLOD=2.6001;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:81.28:0,81,1787	0/1:2,7:9:80.91:315,0,81	0/0:20,0:20:48.15:0,48,1031	0/0:17,0:17:37.91:0,38,731	0/0:11,0:11:33.11:0,33,694	0/0:11,0:11:33.08:0,33,652	0/0:14,0:14:42.02:0,42,798	0/0:22,0:22:51.18:0,51,1127	0/0:15,0:15:45.15:0,45,1005	0/0:20,0:20:51.15:0,51,1082	0/0:10,0:10:27.09:0,27,602	0/0:11,0:11:30.10:0,30,670	0/0:7,0:7:21.07:0,21,469	0/0:16,0:16:45.15:0,45,1004	0/0:10,0:10:30.10:0,30,652	0/0:17,0:17:51.15:0,51,1093	0/1:13,12:25:99:469,0,557	0/0:23,0:23:66.21:0,66,1387	0/0:16,0:16:42.13:0,42,884	0/0:14,0:14:42.14:0,42,919	0/0:24,0:24:69.24:0,69,1522	0/0:11,0:11:27.09:0,27,602	0/0:8,0:8:24.08:0,24,536	0/0:13,0:13:39.07:0,39,763	0/0:18,0:18:51.16:0,51,1068	0/0:12,0:12:36.09:0,36,672	0/0:11,0:11:33.11:0,33,717	0/0:10,0:10:30.10:0,30,626
chr10	44499919	.	A	ACTCTCTCT	684.71	PASS	AB=1.000;AC=13;AF=0.433;AN=30;BaseQRankSum=0.259;DP=225;FS=3.061;HRun=0;HaplotypeScore=69.2826;InbreedingCoeff=0.5782;MQ=72.71;MQ0=3;MQRankSum=-0.674;QD=8.45;ReadPosRankSum=-2.831;VQSLOD=0.6051;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	0/0:18,0:14:1.23:0,1,19	0/0:8,0:8:15.02:0,15,246	./.	1/1:8,0:8:6.02:122,6,0	1/1:17,0:13:6.02:154,6,0	./.	1/1:13,0:13:8.92:129,9,0	./.	./.	0/0:2,0:2:0.47:0,0,1	1/1:10,0:10:6.01:75,6,0	./.	1/1:10,0:10:9.01:145,9,0	0/0:13,0:13:23.99:0,24,258	1/1:10,4:13:8.95:176,9,0	0/0:8,0:8:9:0,9,175	0/0:11,0:11:15.04:0,15,300	./.	./.	./.	./.	./.	0/0:4,0:4:3.01:0,3,53	0/1:9,0:9:8.99:9,0,94	0/0:8,0:8:11.96:0,12,307
chr10	44500374	.	TGG	T	931.44	PASS	AB=0.572;AC=2;AF=0.036;AN=56;BaseQRankSum=8.221;DP=671;FS=3.863;HRun=3;HaplotypeScore=96.7993;InbreedingCoeff=-0.0381;MQ=86.03;MQ0=0;MQRankSum=-4.280;QD=26.61;ReadPosRankSum=0.246;VQSLOD=2.5117;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,129,2400	0/1:3,5:8:39.77:211,0,40	0/0:21,0:20:60.21:0,60,1153	0/0:24,0:24:69.23:0,69,1251	0/0:13,0:13:36.11:0,36,648	0/0:29,0:29:87.30:0,87,1681	0/0:22,0:22:66.18:0,66,1235	0/0:35,0:34:99:0,102,1936	0/0:40,0:40:99:0,120,2317	0/0:24,0:24:72.25:0,72,1384	0/0:13,0:13:39.13:0,39,753	0/0:18,0:18:54.19:0,54,1044	0/0:30,0:30:87.29:0,87,1634	0/0:20,0:20:57.18:0,57,1067	0/0:33,0:33:99:0,99,1880	0/0:24,0:24:72.25:0,72,1391	0/1:3,24:27:52.59:809,0,53	0/0:15,0:15:45.15:0,45,869	0/0:27,0:27:81.26:0,81,1532	0/0:16,0:16:48.16:0,48,927	0/0:34,0:34:99:0,102,1953	0/0:13,0:13:36.11:0,36,665	0/0:19,0:19:57.20:0,57,1093	0/0:41,0:41:99:0,123,2340	0/0:22,0:22:63.21:0,63,1185	0/0:21,0:21:63.21:0,63,1173	0/0:34,0:33:99:0,102,1921	0/0:4,0:4:12.04:0,12,232
chr10	44500605	.	A	ATT	2245.12	PASS	AB=0.667;AC=29;AF=0.518;AN=56;BaseQRankSum=9.836;DP=432;FS=1.320;HRun=9;HaplotypeScore=66.7342;InbreedingCoeff=0.8950;MQ=67.10;MQ0=0;MQRankSum=0.077;QD=9.28;ReadPosRankSum=1.185;VQSLOD=0.3210;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:69.16:0,69,734	1/1:0,0:3:7.49:26,7,0	0/0:8,0:8:11.03:0,11,98	0/0:7,0:6:9.49:0,9,92	0/0:24,0:24:57.11:0,57,599	0/0:22,0:22:66.12:0,66,684	0/0:13,0:13:30.07:0,30,319	1/1:5,24:31:77.70:1095,78,0	0/0:13,0:13:30.07:0,30,319	1/1:3,0:21:40.19:167,40,0	1/1:2,0:16:29.94:103,30,0	1/1:1,0:14:29.94:103,30,0	1/1:1,0:13:29.27:99,29,0	1/1:3,0:17:25.93:88,26,0	1/1:3,0:11:19.96:68,20,0	1/1:1,0:8:17.47:60,17,0	1/1:3,0:22:39.93:137,40,0	1/1:1,0:15:36.97:126,37,0	0/0:7,0:7:18.04:0,18,192	0/0:16,0:16:42.09:0,42,439	0/0:8,0:8:21.05:0,21,224	0/1:6,0:12:14.89:29,0,15	1/1:4,0:20:29.94:103,30,0	1/1:1,0:13:27.45:94,27,0	1/1:5,0:25:47.88:174,48,0	0/0:14,0:15:30.02:0,30,372	0/0:27,0:27:72.16:0,72,765	0/0:5,0:5:9.02:0,9,96
chr10	44500714	.	C	CG	910.48	PASS	AB=0.833;AC=16;AF=0.286;AN=56;BaseQRankSum=-1.211;DP=315;FS=7.678;HRun=8;HaplotypeScore=48.1946;InbreedingCoeff=0.7858;MQ=79.98;MQ0=1;MQRankSum=-4.171;QD=11.10;ReadPosRankSum=-2.179;VQSLOD=1.2754;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:62.85:0,63,561	0/1:2,0:3:0.01:0,0,0	0/0:18,0:17:25:0,25,248	0/0:24,0:24:28.59:0,29,287	0/0:12,0:12:21:0,21,192	0/0:13,0:13:29.88:0,30,262	0/0:15,0:15:39.01:0,39,356	1/1:3,6:8:11.99:123,12,0	0/0:7,0:7:18.01:0,18,164	0/0:10,0:10:27.01:0,27,247	0/0:8,0:8:18.01:0,18,164	1/1:2,3:5:8.83:100,9,0	1/1:7,8:14:12.04:138,12,0	1/1:3,4:7:7.26:72,7,0	0/0:7,0:7:18:0,18,160	0/0:11,0:11:26.99:0,27,238	1/1:2,0:10:8.52:43,9,0	0/0:14,0:14:39.01:0,39,356	0/0:4,0:4:2.99:0,3,27	0/0:10,0:10:26.85:0,27,233	0/0:12,0:12:21.01:0,21,192	1/1:4,5:9:12.03:135,12,0	0/1:3,3:6:17.01:61,0,17	1/1:7,11:18:39.06:422,39,0	0/0:13,0:14:32.03:0,32,275	0/0:9,0:9:24.01:0,24,219	0/0:9,0:9:18.46:0,18,164	0/0:6,0:6:8.27:0,8,81
chr10	44500793	.	GAGA	G	657.68	PASS	AB=0.940;AC=14;AF=0.250;AN=56;BaseQRankSum=0.950;DP=376;FS=1.481;HRun=0;HaplotypeScore=148.1736;InbreedingCoeff=0.1982;MQ=75.80;MQ0=8;MQRankSum=-4.210;QD=6.92;ReadPosRankSum=-5.608;VQSLOD=1.1253;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:33.72:0,34,140	1/1:2,0:2:3:27,3,0	0/0:52,0:18:23.86:0,24,295	0/0:66,0:28:27.35:0,27,424	0/1:9,2:11:33.40:67,0,33	0/0:18,0:18:13.20:0,13,101	0/0:8,0:8:15.68:0,16,73	1/1:6,2:8:15.03:192,15,0	0/0:6,0:6:15.56:0,16,61	0/1:17,0:18:67.95:124,0,68	0/0:8,0:8:7.77:0,8,30	0/1:8,0:8:16.55:17,0,52	0/1:10,1:11:31.84:86,0,32	0/0:4,0:4:5.19:0,5,21	0/0:9,0:9:16.22:0,16,77	0/0:6,0:6:1.24:0,1,44	1/1:1,0:1:2.99:23,3,0	0/0:4,0:4:7.79:0,8,31	1/1:11,0:11:0.57:164,1,0	0/0:11,0:11:28.64:0,29,114	0/0:15,0:14:26.21:0,26,104	0/0:10,0:9:11.85:0,12,50	0/0:10,0:10:18.31:0,18,73	0/0:11,0:11:12.91:0,13,48	0/0:11,0:11:23.46:0,23,93	0/1:12,1:13:58.95:59,0,81	0/1:12,0:12:38.82:55,0,39	0/0:4,0:4:8.04:0,8,32
chr10	44500795	.	GA	G	6987.64	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-4.789;DP=374;FS=0.000;HRun=2;HaplotypeScore=119.1427;InbreedingCoeff=0.6740;MQ=75.76;MQ0=8;MQRankSum=-3.228;QD=27.84;ReadPosRankSum=3.025;VQSLOD=4.4674;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,27:28:50.92:658,51,0	1/1:2,0:2:2.80:13,3,0	0/0:54,0:19:19.59:0,20,285	0/0:67,1:29:13.70:0,14,326	1/1:2,9:11:21.01:251,21,0	1/1:1,17:18:45.15:583,45,0	1/1:1,6:7:15.05:194,15,0	1/1:5,2:7:8.76:69,9,0	1/1:0,6:6:18.06:233,18,0	1/1:3,15:18:51.14:642,51,0	1/1:0,8:8:9.03:117,9,0	1/1:0,8:8:24.08:309,24,0	1/1:2,9:11:26.92:316,27,0	1/1:0,4:4:6.02:78,6,0	1/1:1,8:9:15.05:195,15,0	1/1:2,4:6:12.02:140,12,0	1/1:1,0:1:2.68:11,3,0	1/1:1,3:4:9.03:117,9,0	1/1:0,10:10:27.09:346,27,0	1/1:0,11:11:33.11:428,33,0	1/1:1,13:13:30.10:389,30,0	1/1:0,10:9:18.06:233,18,0	1/1:0,10:10:24.08:306,24,0	1/1:4,6:10:8.14:150,8,0	1/1:1,10:11:27.09:350,27,0	1/1:2,10:12:32.94:402,33,0	1/1:2,9:11:27.09:342,27,0	1/1:1,3:4:9.03:117,9,0
chr10	44500796	.	A	AG	1339.37	PASS	AB=1.000;AC=49;AF=0.875;AN=56;BaseQRankSum=-2.742;DP=370;FS=8.594;HRun=1;HaplotypeScore=141.4634;InbreedingCoeff=0.4822;MQ=75.72;MQ0=8;MQRankSum=-3.269;QD=4.51;ReadPosRankSum=2.408;VQSLOD=0.1850;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:27,1:28:23.45:113,23,0	0/0:2,0:2:0.47:0,0,1	0/1:53,0:19:0.18:0,0,263	0/0:69,0:29:28.87:0,29,356	1/1:11,0:11:11.32:64,11,0	1/1:18,0:18:19.91:101,20,0	1/1:7,0:7:4.43:10,4,0	1/1:7,0:6:5.50:45,6,0	1/1:6,0:6:5.32:11,5,0	1/1:17,1:18:30.87:246,31,0	1/1:8,0:8:4.31:11,4,0	1/1:9,0:9:11.27:57,11,0	1/1:12,0:12:13.71:101,14,0	1/1:4,0:4:2.49:6,2,0	1/1:8,0:8:6.39:17,6,0	1/1:5,0:5:4.57:11,5,0	0/0:1,0:1:1.82:0,2,5	1/1:3,0:3:3.69:9,4,0	1/1:10,0:10:22.70:249,23,0	1/1:12,0:12:12.93:32,13,0	1/1:13,0:12:11.33:28,11,0	1/1:10,0:9:8.83:33,9,0	1/1:11,0:11:9.57:57,10,0	1/1:6,2:9:1.27:6,1,0	1/1:11,0:11:14.55:45,15,0	1/1:11,0:11:15.47:84,15,0	1/1:9,1:10:16.11:109,16,0	1/1:3,0:3:4.50:12,5,0
chr10	44500811	.	AAG	A	8341.87	PASS	AB=0.949;AC=54;AF=0.964;AN=56;BaseQRankSum=-2.516;DP=375;FS=0.000;HRun=0;HaplotypeScore=109.7678;InbreedingCoeff=-0.0669;MQ=66.85;MQ0=15;MQRankSum=-1.227;QD=22.24;ReadPosRankSum=2.898;VQSLOD=5.1671;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,20:22:57.01:768,57,0	1/1:1,2:3:6.02:84,6,0	0/1:57,2:18:99:156,0,232	0/1:84,6:26:99:142,0,235	1/1:1,6:7:12.02:165,12,0	1/1:2,12:14:39.12:605,39,0	1/1:0,7:7:18.06:291,18,0	1/1:0,8:7:18.06:276,18,0	1/1:1,5:6:18.06:285,18,0	1/1:3,10:13:36.12:573,36,0	1/1:0,10:10:24.08:324,24,0	1/1:0,10:10:30.10:481,30,0	1/1:2,8:10:26.99:378,27,0	1/1:1,6:7:15.05:244,15,0	1/1:1,5:6:15.03:214,15,0	1/1:0,4:4:12.04:194,12,0	1/1:0,1:1:3.01:49,3,0	1/1:0,3:3:9.03:146,9,0	1/1:2,8:10:27.04:381,27,0	1/1:0,11:11:27.08:403,27,0	1/1:2,10:11:26.99:345,27,0	1/1:1,8:8:21.07:327,21,0	1/1:1,8:9:11.77:180,12,0	1/1:1,6:8:2.69:48,3,0	1/1:0,8:8:23.96:313,24,0	1/1:1,9:10:30.10:464,30,0	1/1:0,9:9:27.09:432,27,0	1/1:3,1:3:6:73,6,0
chr10	44501322	.	TCCTCTC	T	965.69	PASS	AC=2;AF=0.037;AN=54;BaseQRankSum=5.151;DP=579;FS=7.169;HRun=0;HaplotypeScore=153.1827;InbreedingCoeff=0.9972;MQ=81.60;MQ0=0;MQRankSum=-6.394;QD=48.28;ReadPosRankSum=1.646;VQSLOD=3.3130;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:95.96:0,96,3403	./.	0/0:22,0:22:57.19:0,57,1669	0/0:17,0:17:42.14:0,42,1145	0/0:20,0:20:57.20:0,57,1989	0/0:23,0:23:69.24:0,69,2447	0/0:20,0:20:60.21:0,60,2078	0/0:29,0:29:75.24:0,75,2594	0/0:22,0:22:66.23:0,66,2335	0/0:31,0:31:93.32:0,93,3274	0/0:9,0:9:24.08:0,24,855	0/0:17,0:17:48.16:0,48,1713	0/0:21,0:21:63.22:0,63,2231	0/0:27,0:27:75.26:0,75,2644	0/0:15,0:15:42.14:0,42,1496	0/0:13,0:13:36.12:0,36,1283	1/1:1,19:20:45.15:1060,45,0	0/0:17,0:17:48.16:0,48,1711	0/0:30,0:30:90.30:0,90,2945	0/0:16,0:16:48.16:0,48,1656	0/0:37,0:37:99:0,111,3960	0/0:24,0:24:66.23:0,66,2302	0/0:12,0:12:30.10:0,30,1021	0/0:25,0:25:72.25:0,72,2490	0/0:15,0:15:42.10:0,42,1347	0/0:17,0:17:51.17:0,51,1709	0/0:25,0:25:72.25:0,72,2504	0/0:19,0:19:51.15:0,51,1655
chr10	44501364	.	A	ATTTG	538.88	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.914;DP=617;FS=1.043;HRun=0;HaplotypeScore=119.8347;InbreedingCoeff=0.9427;MQ=89.43;MQ0=0;MQRankSum=-6.119;QD=29.94;ReadPosRankSum=-0.425;VQSLOD=3.1986;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:96.30:0,96,1936	1/1:1,2:3:5.98:128,6,0	0/0:24,0:24:60.18:0,60,1115	0/0:27,0:27:78.25:0,78,1503	0/0:24,0:24:63.09:0,63,1234	0/0:22,0:22:63.19:0,63,1266	0/0:13,0:13:38.98:0,39,731	0/0:35,0:35:99:0,99,1955	0/0:18,0:18:54.19:0,54,1130	0/0:26,0:26:75.20:0,75,1461	0/0:15,0:15:36.12:0,36,752	0/0:24,0:24:72.22:0,72,1428	0/0:24,0:24:72.23:0,72,1433	0/0:20,0:20:60.19:0,60,1218	0/0:21,0:21:60.19:0,60,1219	0/0:19,0:19:57.18:0,57,1150	1/1:7,8:15:35.86:523,36,0	0/0:28,0:28:81.24:0,81,1619	0/0:25,0:25:75.23:0,75,1463	0/0:14,0:14:42.14:0,42,880	0/0:33,0:33:99:0,99,1825	0/0:24,0:24:72.10:0,72,1341	0/0:19,0:19:51.09:0,51,986	0/0:19,0:19:57.18:0,57,1157	0/0:24,0:23:63.18:0,63,1260	0/0:26,0:26:78.26:0,78,1598	0/0:32,0:32:96.33:0,96,1971	0/0:11,0:11:33.11:0,33,691
chr10	44501365	.	C	CA	136.42	PASS	AB=0.692;AC=3;AF=0.054;AN=56;BaseQRankSum=5.575;DP=624;FS=0.000;HRun=1;HaplotypeScore=84.9826;InbreedingCoeff=0.6194;MQ=90.17;MQ0=0;MQRankSum=-5.118;QD=6.20;ReadPosRankSum=0.317;VQSLOD=0.3890;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:96.32:0,96,1342	1/1:2,2:4:11.97:97,12,0	0/0:25,0:25:65.40:0,65,837	0/0:28,0:28:78.36:0,78,1006	0/0:23,0:23:60.13:0,60,814	0/0:22,0:22:63.19:0,63,862	0/0:12,0:12:36.12:0,36,501	0/0:35,0:35:99:0,99,1356	0/0:19,0:19:54.18:0,54,755	0/0:27,0:27:78.25:0,78,1067	0/0:16,0:16:36.12:0,36,502	0/0:25,0:25:72.24:0,72,1005	0/0:24,0:24:72.24:0,72,1004	0/0:19,0:19:57.19:0,57,797	0/0:21,0:21:60.20:0,60,837	0/0:19,0:19:57.18:0,57,780	0/1:10,8:18:60.41:140,0,60	0/0:29,0:29:84.24:0,84,1137	0/0:25,0:25:75.24:0,75,1031	0/0:14,0:14:42.14:0,42,587	0/0:33,0:33:99:0,99,1361	0/0:23,0:23:69.18:0,69,939	0/0:19,0:19:51.13:0,51,688	0/0:19,0:19:57.18:0,57,780	0/0:24,0:23:63.21:0,63,878	0/0:26,0:26:78.25:0,78,1077	0/0:32,0:32:96.32:0,96,1338	0/0:11,0:11:33.11:0,33,461
chr10	44501588	.	T	TGC	385.88	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=4.410;DP=758;FS=13.333;HRun=0;HaplotypeScore=154.1920;InbreedingCoeff=0.7612;MQ=67.37;MQ0=13;MQRankSum=-1.036;QD=18.38;ReadPosRankSum=-1.569;VQSLOD=3.0605;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:96.29:0,96,1219	1/1:2,3:5:3.01:51,3,0	0/0:20,0:15:10.42:0,10,128	0/0:25,0:21:6.04:0,6,142	0/0:21,0:22:51.16:0,51,656	0/0:26,0:25:54.15:0,54,666	0/0:46,0:46:99:0,108,1388	0/0:21,0:20:39.13:0,39,501	0/0:28,0:28:75.24:0,75,965	0/0:41,0:38:90.25:0,90,1142	0/0:14,0:13:12.04:0,12,155	0/0:28,0:28:36.12:0,36,463	0/0:28,0:25:51.12:0,51,639	0/0:29,0:27:17.11:0,17,244	0/0:21,0:21:18.06:0,18,231	0/0:23,0:23:18.05:0,18,218	1/1:5,11:16:30.08:444,30,0	0/0:27,0:27:60.11:0,60,729	0/0:19,0:18:39.10:0,39,465	0/0:18,0:18:36.10:0,36,449	0/0:80,0:79:99:0,186,2294	0/0:11,0:9:6.02:0,6,77	0/0:20,0:19:18.06:0,18,231	0/0:48,0:45:57.18:0,57,731	0/0:31,0:30:45.15:0,45,579	0/0:34,0:34:87.28:0,87,1108	0/0:26,0:25:60.15:0,60,730	0/0:10,0:10:30.10:0,30,386
chr10	44501608	.	GCA	G	1457.82	PASS	AB=0.838;AC=19;AF=0.365;AN=52;BaseQRankSum=4.980;DP=786;FS=38.739;HRun=0;HaplotypeScore=165.2531;InbreedingCoeff=-0.0862;MQ=55.11;MQ0=23;MQRankSum=-1.369;QD=3.54;ReadPosRankSum=3.172;VQSLOD=1.4780;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:38:87.30:0,87,1349	./.	./.	0/0:25,0:7:2.04:0,2,6	0/1:21,2:23:20.78:21,0,654	0/0:25,1:25:24.20:0,24,817	0/0:47,0:47:88.67:0,89,1800	0/1:13,5:17:17.40:151,0,17	0/0:26,0:27:63.13:0,63,907	0/1:34,10:40:69.69:354,0,70	1/1:13,1:13:2.04:6,2,0	0/1:23,4:27:59.44:117,0,59	0/1:18,6:21:9.72:190,0,10	0/1:24,4:24:12.67:20,0,13	1/1:14,3:17:5.79:72,6,0	0/1:18,4:23:1.59:30,0,2	0/0:14,0:13:11.92:0,12,106	0/1:24,8:32:18.86:182,0,19	0/0:21,0:16:27:0,27,349	0/0:14,0:14:27.07:0,27,408	0/0:110,6:114:87.69:0,88,3289	0/1:13,3:14:24.24:24,0,42	0/1:13,7:19:2.99:58,0,3	0/1:32,14:43:11.95:255,0,12	1/1:22,4:25:5.80:72,6,0	0/1:40,4:44:45.38:45,0,1266	0/0:16,1:16:6.16:0,6,554	0/1:9,1:10:14.87:15,0,262
chr10	44501626	.	A	ACG	3974.44	PASS	AB=0.861;AC=24;AF=0.444;AN=54;BaseQRankSum=10.306;DP=819;FS=85.214;HRun=0;HaplotypeScore=181.5561;InbreedingCoeff=0.7561;MQ=48.49;MQ0=29;MQRankSum=-5.001;QD=12.42;ReadPosRankSum=-2.741;VQSLOD=0.0971;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:51:99:0,120,1552	./.	0/0:22,0:3:3:0,3,25	0/0:26,0:4:10.55:0,11,83	0/0:21,0:21:41.74:0,42,702	0/0:24,1:24:60.03:0,60,827	0/0:62,0:62:99:0,135,2074	0/1:13,0:12:11.52:182,0,12	0/0:26,0:25:68.77:0,69,896	1/1:24,17:37:79.25:1065,79,0	1/1:4,8:11:2.92:8,3,0	0/1:16,10:26:16.33:244,0,16	1/1:18,7:22:43.89:507,44,0	1/1:8,19:22:13.48:155,13,0	1/1:8,7:15:8.75:90,9,0	1/1:13,10:23:17.99:227,18,0	0/0:10,0:9:11.94:0,12,105	1/1:26,4:29:21.47:471,21,0	0/0:29,0:24:45.69:0,46,572	0/0:16,0:16:39:0,39,481	0/0:134,0:130:99:0,262,3750	1/1:15,5:18:14.76:161,15,0	1/1:13,8:21:3.25:126,3,0	1/1:35,5:37:44.83:542,45,0	1/1:17,7:23:21.47:197,21,0	0/0:44,0:43:34.52:0,35,1412	0/0:18,0:17:44.99:0,45,604	0/0:11,0:11:23.92:0,24,309
chr10	44501629	.	C	CGCAT	4823.47	PASS	AB=0.862;AC=21;AF=0.389;AN=54;BaseQRankSum=10.032;DP=808;FS=61.497;HRun=0;HaplotypeScore=200.4194;InbreedingCoeff=0.6692;MQ=48.40;MQ0=30;MQRankSum=-4.334;QD=16.30;ReadPosRankSum=-1.595;VQSLOD=2.1874;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:51:99:0,126,1718	./.	0/0:23,0:4:8.24:0,8,94	0/0:28,0:4:11.83:0,12,140	0/0:21,0:21:51.12:0,51,837	0/0:25,0:24:54.06:0,54,841	0/0:60,0:60:99:0,159,2436	0/0:12,0:11:13.18:0,13,143	0/0:24,0:23:63.10:0,63,1015	1/1:22,15:35:68.04:1379,68,0	1/1:6,6:11:9.01:117,9,0	1/1:16,10:26:8.55:401,9,0	1/1:17,6:21:33.57:688,34,0	1/1:18,8:21:12.04:232,12,0	1/1:6,7:13:5.18:42,5,0	1/1:13,9:22:2.63:308,3,0	0/0:9,0:8:5.71:0,6,75	0/1:26,4:29:56.43:544,0,56	0/0:28,0:24:46.01:0,46,720	0/0:14,0:14:35.99:0,36,621	0/0:141,1:138:99:0,311,4973	1/1:15,6:18:12.04:260,12,0	1/1:16,6:21:16.23:167,16,0	0/1:36,4:37:12.50:455,0,13	0/1:17,6:22:7.91:230,0,8	0/0:47,0:46:90.12:0,90,1848	0/0:16,0:15:36.12:0,36,645	0/0:9,0:9:26.91:0,27,393
chr10	44501642	.	ACACG	A	95.53	PASS	AB=0.876;AC=3;AF=0.056;AN=54;BaseQRankSum=4.594;DP=810;FS=7.962;HRun=0;HaplotypeScore=216.4621;InbreedingCoeff=-0.0618;MQ=48.26;MQ0=25;MQRankSum=-3.209;QD=2.03;ReadPosRankSum=0.802;VQSLOD=1.6439;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:45:99:0,101,2335	./.	0/0:25,0:3:9.03:0,9,189	0/0:38,0:5:15.01:0,15,246	0/0:19,0:19:39.09:0,39,880	0/0:24,0:23:57.11:0,57,1248	0/0:55,0:55:99:0,156,3353	0/0:10,0:10:30.10:0,30,488	0/0:28,0:27:66.20:0,66,1497	0/0:36,0:35:97.45:0,97,1636	0/1:12,0:12:5.66:6,0,202	0/0:36,0:36:39.62:0,40,701	0/0:19,0:18:44.89:0,45,834	0/0:25,0:21:22.81:0,23,332	0/0:13,0:13:5.74:0,6,71	0/0:17,0:17:18.05:0,18,420	0/1:4,2:6:27.77:51,0,28	0/1:25,4:28:99:132,0,862	0/0:25,0:22:57.15:0,57,1013	0/0:16,0:16:37.01:0,37,814	0/0:156,0:152:99:0,332,7633	0/0:20,0:19:20.88:0,21,457	0/0:20,0:20:18.06:0,18,350	0/0:43,0:42:42.01:0,42,828	0/0:24,0:23:24.55:0,25,513	0/0:41,0:40:99:0,114,2599	0/0:16,0:15:39.10:0,39,869	0/0:8,0:8:20.43:0,20,473
chr10	44501660	.	GCA	G	6979.70	PASS	AB=0.750;AC=15;AF=0.278;AN=54;BaseQRankSum=-0.712;DP=815;FS=20.301;HRun=0;HaplotypeScore=164.4251;InbreedingCoeff=0.7221;MQ=50.37;MQ0=26;MQRankSum=5.836;QD=20.77;ReadPosRankSum=1.326;VQSLOD=3.8269;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,41:47:93.77:1185,94,0	./.	0/0:44,0:6:8.76:0,9,141	0/0:49,1:10:18.04:0,18,272	1/1:14,4:18:9.03:115,9,0	0/0:22,0:22:60.21:0,60,998	0/0:58,1:59:99:0,107,2232	0/0:12,0:12:27.09:0,27,451	0/0:25,1:25:22.01:0,22,902	0/0:30,0:30:36.96:0,37,1069	0/0:12,0:12:14.96:0,15,251	0/0:34,0:34:26.58:0,27,537	0/0:16,0:17:42.13:0,42,676	0/0:25,0:22:31.34:0,31,500	0/0:10,0:10:12.04:0,12,200	0/0:15,0:15:24.04:0,24,362	0/1:3,0:3:3.22:4,0,3	0/0:26,0:25:54.64:0,55,870	1/1:7,11:15:21.01:250,21,0	0/1:4,11:15:41.43:345,0,41	1/1:33,136:165:99:4139,269,0	0/0:13,0:13:21.07:0,21,351	0/0:19,0:19:24.06:0,24,375	0/0:42,0:42:45.13:0,45,752	0/0:21,0:21:26.69:0,27,452	0/1:21,20:40:40.10:537,0,40	1/1:5,9:13:24.06:291,24,0	1/1:5,5:9:9.03:114,9,0
chr10	44501680	.	CACACA	C	98.71	PASS	AB=0.857;AC=3;AF=0.056;AN=54;BaseQRankSum=4.561;DP=769;FS=15.290;HRun=0;HaplotypeScore=229.2497;InbreedingCoeff=0.4168;MQ=58.45;MQ0=21;MQRankSum=-3.888;QD=3.80;ReadPosRankSum=-1.510;VQSLOD=1.1583;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:39:99:0,105,3061	./.	0/0:49,0:12:32.94:0,33,637	0/0:59,0:18:33.19:0,33,876	0/0:7,0:7:14.88:0,15,344	0/0:25,0:25:66.21:0,66,1887	0/0:56,0:56:99:0,157,4454	0/0:16,0:16:33.69:0,34,909	0/0:25,0:25:59.82:0,60,1570	0/0:24,0:24:63.21:0,63,1764	0/0:10,0:10:13.86:0,14,377	0/0:28,0:28:37.65:0,38,1074	0/0:17,0:17:41.87:0,42,1164	0/0:23,0:23:37.76:0,38,839	0/0:8,0:8:11.99:0,12,192	0/0:15,0:15:21.07:0,21,650	1/1:2,0:2:2.84:29,3,0	0/1:20,4:23:99:161,0,1214	0/0:10,0:10:24.08:0,24,694	0/0:12,0:12:30.10:0,30,787	0/0:175,1:173:99:0,443,12524	0/0:14,0:14:21.07:0,21,624	0/0:18,0:18:20.76:0,21,651	0/0:45,0:45:47.62:0,48,1308	0/0:19,0:19:39.61:0,40,941	0/0:27,0:26:66.18:0,66,1867	0/0:11,0:11:27.09:0,27,672	0/0:6,0:5:9.03:0,9,174
chr10	44501729	.	GCACA	G	770.52	PASS	AB=0.974;AC=20;AF=0.385;AN=52;BaseQRankSum=7.337;DP=568;FS=3.746;HRun=0;HaplotypeScore=129.6846;InbreedingCoeff=0.7006;MQ=52.01;MQ0=7;MQRankSum=-5.579;QD=8.03;ReadPosRankSum=1.271;VQSLOD=2.8444;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:90.12:0,90,2021	0/1:2,0:2:12.21:18,0,12	0/0:41,0:11:18.06:0,18,421	0/0:40,0:12:23.85:0,24,411	0/0:8,0:8:21.07:0,21,521	0/0:23,0:23:63.20:0,63,1449	0/0:41,0:41:99:0,114,2581	0/0:8,0:8:18.02:0,18,223	0/0:22,0:23:56.97:0,57,1250	1/1:6,2:8:12.04:173,12,0	./.	1/1:8,3:10:5.38:62,5,0	1/1:8,2:10:17.61:222,18,0	1/1:9,7:15:2.52:54,3,0	1/1:4,0:4:6.02:95,6,0	1/1:3,2:5:12.02:148,12,0	./.	1/1:8,1:9:10.49:126,10,0	0/0:16,0:15:36.07:0,36,714	0/0:8,0:8:9.03:0,9,231	0/0:178,0:181:99:0,457,10435	1/1:5,2:7:3:43,3,0	1/1:6,0:6:0.30:1,0,0	0/1:17,1:18:0:0,0,0	0/0:6,2:8:1.25:0,1,3	0/0:18,0:18:42.09:0,42,910	0/0:6,0:6:12.02:0,12,217	0/0:6,0:5:9.03:0,9,231
chr10	44501744	.	C	CA	78.04	PASS	AC=12;AF=0.250;AN=48;BaseQRankSum=7.019;DP=497;FS=0.000;HRun=0;HaplotypeScore=87.1027;InbreedingCoeff=0.6800;MQ=49.59;MQ0=8;MQRankSum=-5.939;QD=3.25;ReadPosRankSum=2.178;VQSLOD=2.7725;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:81.21:0,81,1090	0/0:2,0:2:2.04:0,2,6	0/0:39,0:8:24.08:0,24,328	0/0:34,0:10:27.04:0,27,316	0/0:8,0:8:18.06:0,18,251	0/0:23,0:22:60.18:0,60,798	0/0:39,0:39:99:0,109,1455	0/0:11,0:10:29.76:0,30,240	0/0:17,0:17:51.17:0,51,700	1/1:2,2:4:8.14:40,8,0	./.	0/0:7,2:8:4.08:0,4,27	1/1:4,2:6:3.33:53,3,0	0/0:9,2:10:0.18:0,0,3	1/1:0,2:2:4.40:17,4,0	1/1:2,2:4:7.55:54,8,0	./.	1/1:3,1:4:6.81:31,7,0	0/0:17,0:16:44.93:0,45,584	0/0:4,0:4:9.03:0,9,125	0/0:181,0:177:99:0,487,6626	1/1:3,1:4:2.73:24,3,0	./.	0/0:6,4:10:1.55:0,2,5	./.	0/0:15,0:15:42.14:0,42,583	0/0:4,0:3:9.03:0,9,124	0/0:6,0:5:9.03:0,9,126
chr10	44501745	.	T	TG	44.82	PASS	AB=0.917;AC=10;AF=0.192;AN=52;BaseQRankSum=6.653;DP=500;FS=0.000;HRun=0;HaplotypeScore=87.9197;InbreedingCoeff=0.5707;MQ=49.58;MQ0=8;MQRankSum=-6.065;QD=2.04;ReadPosRankSum=1.964;VQSLOD=2.0245;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:78.26:0,78,1085	0/1:2,0:2:0.90:7,0,1	0/0:37,1:8:24.08:0,24,334	0/0:33,0:10:27.01:0,27,300	0/0:8,0:8:18.05:0,18,235	0/0:23,0:22:63.17:0,63,835	0/0:40,0:40:99:0,106,1466	0/0:11,0:10:30.02:0,30,332	0/0:17,0:17:51.17:0,51,709	1/1:2,2:4:7.25:39,7,0	0/0:0,2:2:0:0,0,0	0/0:7,2:8:3.93:0,4,34	1/1:3,1:5:1.74:39,2,0	0/0:10,2:10:0.21:0,0,4	1/1:0,2:2:4.40:17,4,0	1/1:2,2:4:7.55:54,8,0	./.	0/1:4,1:5:2.49:18,0,2	0/0:17,0:16:44.94:0,45,596	0/0:4,0:4:9.03:0,9,125	0/0:180,0:176:99:0,485,6686	0/0:3,1:4:0.47:0,0,1	0/0:2,1:3:0:0,0,0	0/0:8,4:12:2.04:0,2,6	./.	0/0:16,0:16:45.09:0,45,588	0/0:5,0:4:9.01:0,9,104	0/0:6,0:5:9.03:0,9,126
chr10	44501766	.	C	CACG	180.03	PASS	AB=0.918;AC=7;AF=0.135;AN=52;BaseQRankSum=5.823;DP=508;FS=2.457;HRun=0;HaplotypeScore=108.4033;InbreedingCoeff=0.1514;MQ=47.23;MQ0=14;MQRankSum=-5.291;QD=3.33;ReadPosRankSum=0.147;VQSLOD=1.6062;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:34:81.25:0,81,1424	0/0:4,0:2:1.16:0,1,4	0/0:21,0:3:6.02:0,6,111	0/0:21,0:4:9.03:0,9,123	0/0:9,0:9:22.32:0,22,393	0/0:20,0:19:54.19:0,54,993	0/0:38,0:38:99:0,99,1692	0/0:23,0:21:47.95:0,48,770	0/0:14,0:14:36.58:0,37,637	0/1:7,0:6:8.58:9,0,63	./.	0/1:11,0:10:5.33:18,0,5	0/1:6,1:6:8.20:14,0,8	0/1:14,0:11:12.90:40,0,13	1/1:4,1:5:5.60:37,6,0	0/0:4,0:4:5.83:0,6,38	0/0:4,0:4:5.98:0,6,47	0/1:6,1:10:82.98:182,0,83	0/0:20,0:14:39.12:0,39,678	0/0:6,0:6:12.04:0,12,220	0/0:171,0:164:99:0,442,7892	0/0:5,0:5:2.51:0,3,27	./.	0/0:12,2:15:1.90:0,2,13	0/0:6,0:5:0:0,0,0	0/0:22,0:21:57.19:0,57,1020	0/0:4,0:3:9.03:0,9,149	0/0:4,0:4:6.02:0,6,112
chr10	44501773	.	A	AC	142.32	PASS	AB=0.829;AC=8;AF=0.154;AN=52;BaseQRankSum=5.634;DP=489;FS=2.515;HRun=1;HaplotypeScore=91.9026;InbreedingCoeff=0.2326;MQ=47.15;MQ0=17;MQRankSum=-5.390;QD=2.54;ReadPosRankSum=-0.350;VQSLOD=-0.6852;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:32:75.25:0,75,1049	0/0:4,0:2:1.63:0,2,5	0/0:10,0:1:3.01:0,3,42	0/0:16,0:3:8.92:0,9,81	0/0:9,0:9:23.57:0,24,303	0/0:16,0:15:42.12:0,42,555	0/0:40,0:40:99:0,105,1441	0/0:24,0:22:48.16:0,48,659	0/0:13,0:13:33.37:0,33,498	0/1:8,1:8:66.17:66,0,85	./.	0/1:8,4:11:5.24:37,0,5	0/1:4,2:5:5.17:65,0,5	1/1:8,6:11:2.70:56,3,0	1/1:4,0:4:2.84:14,3,0	0/0:3,1:4:1.10:0,1,16	0/0:0,0:4:4.83:0,5,12	0/1:7,1:11:23.60:24,0,102	0/0:24,0:17:45.14:0,45,607	0/0:6,0:7:15.05:0,15,210	0/0:159,0:153:99:0,412,5713	0/0:4,2:6:2.99:0,3,35	./.	0/0:15,4:18:0.48:0,0,4	0/0:5,1:5:0:0,0,0	0/0:22,0:20:57.19:0,57,785	0/0:4,0:3:9.03:0,9,124	0/0:4,0:4:6.02:0,6,84
chr10	44501775	.	GCA	G	127.49	PASS	AB=0.957;AC=7;AF=0.146;AN=48;BaseQRankSum=5.680;DP=512;FS=6.746;HRun=0;HaplotypeScore=100.5519;InbreedingCoeff=0.3301;MQ=46.67;MQ0=17;MQRankSum=-6.406;QD=2.24;ReadPosRankSum=-2.217;VQSLOD=1.1525;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:34:81.27:0,81,1365	1/1:4,0:2:5.42:23,5,0	./.	./.	0/0:11,0:11:22.88:0,23,336	0/0:16,0:15:36.12:0,36,601	0/0:40,0:40:99:0,99,1646	0/1:23,4:25:99:187,0,142	0/0:13,0:13:38.33:0,38,576	0/0:10,0:9:17.53:0,18,176	./.	0/1:15,0:14:3.74:4,0,22	0/0:8,0:6:7.60:0,8,45	0/0:15,0:13:1.96:0,2,39	0/0:5,0:4:3.01:0,3,37	0/0:6,0:5:7.56:0,8,60	1/1:4,0:4:3.30:18,3,0	0/0:11,0:11:8.99:0,9,202	0/0:25,0:18:39.13:0,39,640	0/0:8,0:8:18.05:0,18,280	0/0:156,0:150:99:0,349,5524	0/0:6,0:6:2.84:0,3,17	./.	0/0:21,0:20:2:0,2,7	0/1:7,0:6:0:0,0,0	0/0:23,0:21:57.17:0,57,894	0/0:6,0:5:12:0,12,173	0/0:4,0:4:5.99:0,6,69
chr10	44501786	.	C	CG	444.76	PASS	AB=0.856;AC=7;AF=0.130;AN=54;BaseQRankSum=6.571;DP=566;FS=0.941;HRun=1;HaplotypeScore=111.0319;InbreedingCoeff=0.0435;MQ=46.33;MQ0=20;MQRankSum=-6.636;QD=5.93;ReadPosRankSum=-0.676;VQSLOD=0.2082;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:40:96.23:0,96,1229	0/0:4,0:2:2.04:0,2,6	0/0:10,0:2:6.02:0,6,78	0/0:15,0:2:3.01:0,3,39	0/0:12,0:12:25.90:0,26,316	0/0:17,0:17:45.09:0,45,558	0/0:45,0:45:99:0,123,1555	0/0:29,0:28:66.49:0,66,719	0/0:20,0:20:46.57:0,47,537	0/1:13,7:18:99:230,0,124	./.	0/0:17,0:16:4.99:0,5,73	0/0:9,0:7:8.28:0,8,89	1/1:17,0:14:1.85:8,2,0	0/0:4,2:5:3.01:0,3,39	0/1:5,3:7:27.31:85,0,27	0/1:6,0:6:2.98:3,0,68	0/1:10,3:13:99:219,0,150	0/0:24,0:18:48.16:0,48,619	0/0:9,0:9:21.07:0,21,272	0/0:145,0:138:99:0,355,4506	0/1:11,0:11:9.83:10,0,32	0/0:8,0:7:3.01:0,3,39	0/0:21,0:20:1.62:0,2,6	0/0:9,6:14:0.47:0,0,1	0/0:27,0:23:66.20:0,66,840	0/0:8,0:7:18.06:0,18,231	0/0:5,0:4:3:0,3,25
chr10	44501793	.	ACG	A	83.93	PASS	AB=0.966;AC=16;AF=0.296;AN=54;BaseQRankSum=7.299;DP=581;FS=5.243;HRun=0;HaplotypeScore=120.7580;InbreedingCoeff=0.3569;MQ=46.28;MQ0=19;MQRankSum=-3.649;QD=0.61;ReadPosRankSum=-3.488;VQSLOD=1.2408;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:47:84.37:0,84,1559	1/1:5,0:3:0.36:15,0,0	0/0:14,0:2:6.02:0,6,109	0/0:14,0:1:3.01:0,3,58	0/0:16,0:16:23.16:0,23,419	0/0:18,0:18:47.97:0,48,757	0/0:44,0:44:97.64:0,98,2054	0/1:29,0:28:5.40:5,0,683	0/0:18,0:18:47.56:0,48,846	0/1:20,0:19:19.28:19,0,81	1/1:6,0:4:2.98:22,3,0	0/1:16,3:19:6.75:26,0,7	1/1:8,1:7:2.74:25,3,0	1/1:16,1:14:1.39:6,1,0	0/0:8,0:7:5.54:0,6,28	0/0:7,0:6:4.98:0,5,20	1/1:6,0:6:8.96:61,9,0	0/0:12,0:13:22.26:0,22,150	0/0:27,0:23:62.57:0,63,885	0/0:11,0:11:21.07:0,21,382	0/0:134,0:127:99:0,341,5309	0/0:9,0:9:0.73:0,1,2	1/1:8,1:8:2.92:17,3,0	0/0:16,2:20:1.94:0,2,8	0/1:17,0:16:32.04:32,0,43	0/0:27,0:23:28.90:0,29,875	0/0:11,0:9:27.06:0,27,424	./.
chr10	44501795	.	GCA	G	72.20	PASS	AB=0.891;AC=15;AF=0.278;AN=54;BaseQRankSum=6.853;DP=597;FS=17.223;HRun=0;HaplotypeScore=123.7020;InbreedingCoeff=0.4523;MQ=46.29;MQ0=19;MQRankSum=-4.092;QD=0.62;ReadPosRankSum=-2.309;VQSLOD=0.9885;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:49:94.84:0,95,1465	0/0:4,1:3:2.43:0,2,20	0/0:15,0:2:6.02:0,6,102	0/0:14,0:1:3.01:0,3,51	0/0:16,0:16:28.90:0,29,426	0/0:19,0:19:45.14:0,45,708	0/0:45,0:45:99:0,117,1882	0/0:30,0:28:45.08:0,45,777	0/0:18,0:18:48.15:0,48,778	0/1:22,1:21:7.53:8,0,286	1/1:6,0:4:2.22:7,2,0	1/1:8,12:20:2.07:38,2,0	1/1:5,4:7:2.75:39,3,0	1/1:9,8:14:1.86:5,2,0	0/0:8,0:7:3.01:0,3,35	0/0:9,0:8:4.28:0,4,66	1/1:6,0:6:10.84:61,11,0	0/1:15,0:15:12.77:13,0,105	0/0:26,0:22:51.17:0,51,795	0/0:11,0:11:24.05:0,24,355	0/0:133,0:127:99:0,301,4656	0/1:6,4:10:0.04:0,0,0	1/1:4,6:8:3.01:39,3,0	0/0:13,8:20:2.03:0,2,7	0/0:18,0:18:14.47:0,14,177	0/0:25,0:21:45.38:0,45,740	0/0:12,0:10:30.10:0,30,491	./.
chr10	44501803	.	ACACG	A	61.29	PASS	AB=0.967;AC=8;AF=0.143;AN=56;BaseQRankSum=5.636;DP=608;FS=18.265;HRun=0;HaplotypeScore=141.8136;InbreedingCoeff=0.2028;MQ=46.10;MQ0=20;MQRankSum=-1.635;QD=0.62;ReadPosRankSum=-3.737;VQSLOD=-0.2930;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:45:99:0,108,2151	0/0:5,0:3:4.13:0,4,33	0/0:20,0:2:6.02:0,6,141	0/0:21,0:3:8.24:0,8,124	0/0:15,0:15:24.65:0,25,542	0/0:18,0:18:45.09:0,45,988	0/0:45,0:45:99:0,123,2850	0/0:27,0:25:58.31:0,58,1092	0/0:21,0:21:50.78:0,51,1141	0/1:23,0:21:11.91:12,0,223	1/1:7,0:5:2.98:22,3,0	0/0:16,3:19:0.42:0,0,18	0/0:8,1:7:8.19:0,8,45	0/1:17,1:14:7.38:27,0,7	0/0:7,0:6:3:0,3,25	0/0:10,0:9:5.55:0,6,52	1/1:6,0:6:6.90:29,7,0	0/0:16,0:16:27.33:0,27,198	0/0:28,0:23:56.77:0,57,1137	0/0:11,0:11:21.07:0,21,499	0/0:129,0:124:99:0,308,6809	0/0:10,0:9:4.32:0,4,23	0/0:10,1:9:2.64:0,3,11	0/1:21,2:23:0.35:0,0,19	0/1:22,0:21:70.73:92,0,71	0/0:25,0:20:16.36:0,16,988	0/0:13,0:11:33:0,33,727	0/0:3,0:1:3.01:0,3,37
chr10	44501825	.	GCA	G	382.06	PASS	AB=0.981;AC=6;AF=0.107;AN=56;BaseQRankSum=4.351;DP=649;FS=4.887;HRun=0;HaplotypeScore=133.2015;InbreedingCoeff=0.3093;MQ=49.02;MQ0=17;MQRankSum=-0.964;QD=5.31;ReadPosRankSum=-0.824;VQSLOD=2.7237;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,120,1971	0/1:3,0:3:0:0,0,0	0/0:40,0:5:6.01:0,6,77	0/0:42,0:7:13.23:0,13,114	0/0:15,0:14:31.92:0,32,503	0/0:17,0:17:42.14:0,42,702	0/0:40,3:43:25.94:0,26,1498	1/1:14,14:27:15.82:468,16,0	0/0:19,0:19:43.87:0,44,785	0/0:31,1:30:17.01:0,17,981	0/0:8,0:7:12.04:0,12,195	0/1:22,0:22:0.52:1,0,46	0/0:10,0:8:11.80:0,12,166	0/0:16,0:14:5.28:0,5,115	0/0:7,0:6:3.01:0,3,50	0/0:13,0:13:14.30:0,14,246	0/1:7,0:7:0.25:0,0,4	0/0:24,0:23:30.04:0,30,680	0/0:22,0:19:45.11:0,45,701	0/1:11,1:12:8.09:8,0,421	0/0:95,3:95:69.94:0,70,3268	0/0:8,0:7:2.74:0,3,50	0/0:13,0:11:0.60:0,1,46	0/0:25,0:27:10.65:0,11,119	0/0:31,0:29:57.56:0,58,954	0/0:27,0:24:60.20:0,60,983	0/0:17,0:14:36.11:0,36,576	0/0:2,0:1:3.01:0,3,50
chr10	44501847	.	CACG	C	101.30	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=4.404;DP=680;FS=5.421;HRun=0;HaplotypeScore=155.2743;InbreedingCoeff=0.6200;MQ=51.75;MQ0=13;MQRankSum=-3.888;QD=7.24;ReadPosRankSum=1.114;VQSLOD=2.3889;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:56:99:0,156,3592	1/1:5,2:7:6:110,6,0	0/0:48,1:14:36.12:0,36,670	0/0:40,0:12:25.32:0,25,447	0/0:19,0:18:51.17:0,51,1121	0/0:15,0:15:45.14:0,45,1023	0/0:35,0:35:99:0,102,2328	0/0:29,0:29:78.22:0,78,1719	0/0:21,1:22:24.83:0,25,1405	0/0:40,0:40:99:0,111,2443	0/0:9,0:9:18.06:0,18,414	0/0:29,0:28:26.59:0,27,630	0/0:12,0:11:27.05:0,27,573	0/0:20,0:19:34.72:0,35,679	0/0:8,1:9:9.03:0,9,220	0/0:13,0:13:1.27:0,1,560	1/1:3,4:7:2.68:88,3,0	0/0:21,0:20:55.90:0,56,1116	0/0:20,0:19:51.14:0,51,1085	0/0:20,0:20:57.20:0,57,1260	0/0:75,0:75:99:0,214,4721	0/0:15,0:14:21.03:0,21,407	0/0:14,0:13:9.70:0,10,233	0/0:28,0:28:35.69:0,36,617	0/0:29,0:28:63.11:0,63,1464	0/0:34,1:35:43.97:0,44,2142	0/0:10,0:9:24.08:0,24,564	0/0:1,0:1:3.01:0,3,74
chr10	44501849	.	CG	C	38.94	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.546;DP=690;FS=4.799;HRun=2;HaplotypeScore=138.7688;InbreedingCoeff=0.7888;MQ=52.97;MQ0=10;MQRankSum=-4.424;QD=2.78;ReadPosRankSum=0.711;VQSLOD=0.0404;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:52,2:54:99:0,150,2211	1/1:6,1:7:5.89:49,6,0	0/0:50,0:17:41.87:0,42,522	0/0:37,2:12:25.31:0,25,323	0/0:18,0:18:51.17:0,51,754	0/0:14,0:14:42.13:0,42,607	0/0:35,0:35:99:0,102,1434	0/0:29,0:29:78.21:0,78,1122	0/0:26,0:26:34.32:0,34,951	0/0:42,0:42:99:0,106,1515	0/0:10,0:10:21.06:0,21,295	0/0:27,2:28:27.13:0,27,404	0/0:13,0:12:30.02:0,30,395	0/0:24,0:23:36.84:0,37,456	0/0:10,0:10:9.03:0,9,134	0/0:12,0:12:22.24:0,22,355	1/1:5,2:7:11.86:95,12,0	0/0:19,0:18:51.12:0,51,721	0/0:20,0:20:51.16:0,51,743	0/0:21,0:21:60.19:0,60,858	0/0:72,0:72:99:0,199,2956	0/0:16,0:15:24.04:0,24,331	0/0:14,0:13:9.71:0,10,176	0/0:28,1:29:34.95:0,35,439	0/0:29,0:28:60.10:0,60,898	0/0:40,0:40:92.42:0,92,1426	0/0:10,0:9:21.07:0,21,313	0/0:1,0:1:3.01:0,3,43
chr10	44501856	.	CACACG	C	102.93	PASS	AB=0.875;AC=3;AF=0.054;AN=56;BaseQRankSum=4.996;DP=674;FS=7.701;HRun=0;HaplotypeScore=177.7887;InbreedingCoeff=0.4534;MQ=54.63;MQ0=7;MQRankSum=-4.393;QD=6.43;ReadPosRankSum=-1.066;VQSLOD=1.2554;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,147,4520	1/1:5,4:9:8.05:159,8,0	0/0:45,0:19:50.21:0,50,928	0/0:33,0:12:31.28:0,31,684	0/0:18,0:18:54.19:0,54,1648	0/0:13,0:13:39.13:0,39,1243	0/0:27,0:27:81.26:0,81,2403	0/0:31,0:31:87.22:0,87,2126	0/0:28,0:28:53.57:0,54,2235	0/0:42,0:42:89.11:0,89,3076	0/0:14,0:14:33.11:0,33,939	0/0:31,0:30:40.98:0,41,979	0/0:12,0:11:29.89:0,30,818	0/0:24,0:23:43.76:0,44,1088	0/0:11,0:11:3.17:0,3,594	0/0:13,0:13:27.08:0,27,798	0/1:6,1:7:40.03:40,0,104	0/0:19,0:18:51.18:0,51,1579	0/0:20,0:20:57.20:0,57,1677	0/0:20,0:20:57.18:0,57,1686	0/0:69,0:69:99:0,199,5588	0/0:16,0:15:33.07:0,33,821	0/0:15,0:14:18.74:0,19,499	0/0:28,0:28:44.75:0,45,1092	0/0:26,0:26:66.19:0,66,1861	0/0:40,0:40:99:0,117,3260	0/0:10,0:9:27.09:0,27,849	0/0:1,0:1:3.01:0,3,45
chr10	44501877	.	CAATA	C	148.46	PASS	AB=0.857;AC=3;AF=0.054;AN=56;BaseQRankSum=4.458;DP=655;FS=2.701;HRun=0;HaplotypeScore=165.2846;InbreedingCoeff=0.6456;MQ=61.00;MQ0=3;MQRankSum=-4.178;QD=9.90;ReadPosRankSum=1.438;VQSLOD=3.1899;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:58:99:0,172,4764	1/1:2,7:9:17.84:211,18,0	0/0:26,0:17:36.07:0,36,823	0/0:21,0:16:32.71:0,33,883	0/0:22,0:22:66.23:0,66,1903	0/0:19,0:19:57.18:0,57,1540	0/0:25,0:25:75.24:0,75,2107	0/0:31,0:31:87.26:0,87,2386	0/0:29,0:29:84.28:0,84,2325	0/0:37,0:37:99:0,111,2863	0/0:18,0:18:54.19:0,54,1522	0/0:28,0:27:69.24:0,69,1848	0/0:15,0:15:42.14:0,42,1190	0/0:22,0:22:66.20:0,66,1807	0/0:11,0:11:33.05:0,33,876	0/0:13,0:13:36.12:0,36,990	0/1:5,1:6:11.23:41,0,11	0/0:19,0:18:54.19:0,54,1545	0/0:23,0:23:69.24:0,69,1953	0/0:19,0:19:57.17:0,57,1550	0/0:52,0:52:99:0,120,3784	0/0:15,0:15:42.14:0,42,1195	0/0:19,0:18:54.18:0,54,1409	0/0:34,0:34:81.28:0,81,2252	0/0:27,0:27:75.26:0,75,2136	0/0:35,0:35:99:0,102,2897	0/0:19,0:19:57.20:0,57,1587	0/0:3,0:3:9.03:0,9,259
chr10	44501878	.	A	AC	86.81	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=4.852;DP=646;FS=7.744;HRun=1;HaplotypeScore=129.6699;InbreedingCoeff=0.7948;MQ=61.31;MQ0=1;MQRankSum=-3.419;QD=6.20;ReadPosRankSum=1.769;VQSLOD=0.4745;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:57:99:0,166,2283	1/1:7,2:9:2.34:126,2,0	0/0:25,0:17:35.98:0,36,467	0/0:18,0:16:41.69:0,42,498	0/0:22,0:22:66.22:0,66,921	0/0:18,0:18:54.17:0,54,738	0/0:26,0:26:75.24:0,75,1028	0/0:30,0:30:84.26:0,84,1141	0/0:28,0:28:84.27:0,84,1153	0/0:34,0:34:99:0,102,1395	0/0:18,0:18:54.18:0,54,750	0/0:28,0:27:63.17:0,63,855	0/0:15,0:15:42.14:0,42,583	0/0:23,0:23:59.46:0,59,872	0/0:11,0:11:33.07:0,33,436	0/0:13,0:13:36.12:0,36,497	1/1:1,4:5:6.01:57,6,0	0/0:19,0:18:54.18:0,54,751	0/0:24,0:24:69.23:0,69,957	0/0:19,0:19:54.18:0,54,744	0/0:51,0:51:99:0,144,1904	0/0:15,0:15:42.14:0,42,587	0/0:19,0:18:54.12:0,54,713	0/0:34,0:34:80.77:0,81,1102	0/0:26,0:26:75.25:0,75,1048	0/0:35,0:35:99:0,102,1407	0/0:20,0:20:57.19:0,57,791	0/0:3,0:3:9.03:0,9,124
chr10	44501881	.	A	AC	77.09	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=4.856;DP=654;FS=5.432;HRun=0;HaplotypeScore=132.6623;InbreedingCoeff=0.8302;MQ=62.19;MQ0=0;MQRankSum=-4.148;QD=5.51;ReadPosRankSum=1.635;VQSLOD=3.0040;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:57:99:0,166,2303	1/1:7,2:9:4.43:120,4,0	0/0:21,0:15:29.97:0,30,348	0/0:18,0:15:39.52:0,40,487	0/0:23,0:23:66.22:0,66,923	0/0:20,0:20:54.15:0,54,720	0/0:27,0:27:81.25:0,81,1112	0/0:32,0:32:87.25:0,87,1190	0/0:28,0:28:81.25:0,81,1113	0/0:32,0:32:96.32:0,96,1327	0/0:20,0:20:60.17:0,60,803	0/0:30,0:29:72.24:0,72,1001	0/0:16,0:16:42.14:0,42,585	0/0:24,0:24:59.46:0,59,872	0/0:10,0:10:30.10:0,30,418	0/0:15,0:15:39.11:0,39,527	1/1:1,4:5:6.01:56,6,0	0/0:19,0:18:54.18:0,54,755	0/0:24,0:24:72.21:0,72,971	0/0:19,0:19:54.15:0,54,735	0/0:47,0:47:99:0,132,1811	0/0:15,0:15:42.14:0,42,581	0/0:19,0:18:54.16:0,54,722	0/0:35,0:35:78.26:0,78,1089	0/0:27,0:27:72.24:0,72,1007	0/0:37,0:37:99:0,105,1452	0/0:21,0:21:60.19:0,60,815	0/0:3,0:3:9.03:0,9,126
chr10	44501885	.	CT	C	5567	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=14.130;DP=637;FS=1.820;HRun=10;HaplotypeScore=107.2903;InbreedingCoeff=0.9614;MQ=62.57;MQ0=0;MQRankSum=-5.323;QD=19.88;ReadPosRankSum=1.826;VQSLOD=4.8752;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:53,2:55:89.20:0,89,1397	1/1:1,0:10:11.50:33,11,0	0/0:18,0:12:23.41:0,23,225	0/0:16,0:14:12.57:0,13,186	0/0:25,0:25:66.12:0,66,705	0/0:18,0:18:51.10:0,51,545	0/0:24,0:24:54.13:0,54,588	0/0:28,2:30:13.97:0,14,566	0/0:27,0:27:63.10:0,63,681	1/1:5,26:32:79.94:674,80,0	1/1:3,16:19:44.98:391,45,0	1/1:4,31:34:68.94:591,69,0	1/1:1,15:16:41.95:357,42,0	1/1:2,23:25:59.30:540,59,0	1/1:2,8:10:23.99:208,24,0	1/1:2,14:16:35.99:312,36,0	1/1:0,0:5:5.05:14,5,0	1/1:0,20:20:53.99:469,54,0	0/0:25,0:25:66.13:0,66,693	0/0:19,1:20:28.08:0,28,529	0/0:42,0:42:96.24:0,96,1053	1/1:3,12:15:38.94:331,39,0	1/1:2,16:17:14.93:357,15,0	1/1:2,31:33:83.90:720,84,0	1/1:2,24:26:65.97:569,66,0	0/0:35,1:36:61.53:0,62,870	0/0:18,0:18:54.15:0,54,597	0/0:3,0:3:9.02:0,9,100
chr10	44502043	.	CTTTTA	C	9039.86	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=18.467;DP=557;FS=11.480;HRun=0;HaplotypeScore=176.6748;InbreedingCoeff=0.9930;MQ=78.79;MQ0=0;MQRankSum=-17.120;QD=34.77;ReadPosRankSum=2.419;VQSLOD=4.0409;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,153,4585	1/1:2,5:7:15.05:238,15,0	0/0:20,0:20:38.87:0,39,1677	0/0:20,0:20:57.11:0,57,1448	0/0:13,0:13:39.13:0,39,1260	0/0:20,0:20:57.18:0,57,1687	0/0:24,0:24:72.22:0,72,2171	1/1:7,22:29:73.48:1137,73,0	0/0:17,0:17:51.16:0,51,1548	1/1:4,11:15:35.95:545,36,0	1/1:4,5:9:17.61:255,18,0	1/1:1,18:19:48.16:756,48,0	1/1:3,11:14:39.05:565,39,0	1/1:5,28:33:93.27:1443,93,0	1/1:1,20:21:63.21:976,63,0	1/1:0,15:15:45.15:718,45,0	1/1:6,13:19:36.11:547,36,0	1/1:4,4:8:15:194,15,0	0/0:29,0:29:87.30:0,87,2721	0/0:34,0:34:99:0,99,3009	0/0:15,0:15:42.14:0,42,1274	1/1:3,9:12:23.44:313,23,0	1/1:7,12:19:39.55:577,40,0	1/1:10,16:25:27.54:384,28,0	1/1:4,10:13:28.91:395,29,0	0/0:24,1:25:20.16:0,20,2008	0/0:19,0:19:54.19:0,54,1732	0/0:10,0:10:30.09:0,30,823
chr10	44502050	.	CTTCTT	C	9287.79	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=18.544;DP=519;FS=14.455;HRun=0;HaplotypeScore=166.1258;InbreedingCoeff=0.9871;MQ=84.13;MQ0=0;MQRankSum=-17.838;QD=43.60;ReadPosRankSum=3.359;VQSLOD=4.3862;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,154,4895	1/1:1,5:5:15.05:252,15,0	0/0:22,0:22:62.57:0,63,1873	0/0:22,0:23:63.22:0,63,1689	0/0:13,0:13:39.13:0,39,1299	0/0:21,0:21:60.19:0,60,1866	0/0:24,0:24:72.25:0,72,2323	1/1:1,22:23:68.26:1148,68,0	0/0:17,0:17:51.15:0,51,1524	1/1:0,11:11:33.11:560,33,0	1/1:0,5:5:15.05:245,15,0	1/1:0,18:18:48.16:800,48,0	1/1:0,11:11:33.11:552,33,0	1/1:2,28:30:90.31:1506,90,0	1/1:1,20:21:61.76:1004,62,0	1/1:0,15:15:45.15:760,45,0	1/1:1,13:17:39.13:612,39,0	1/1:2,4:6:10.80:161,11,0	0/0:31,0:31:93.31:0,93,3008	0/0:33,0:33:93.32:0,93,3059	0/0:15,0:15:45.15:0,45,1434	1/1:0,9:9:18.06:291,18,0	1/1:1,12:13:39.11:612,39,0	1/1:1,16:17:24.04:370,24,0	1/1:0,10:9:26.98:416,27,0	0/0:23,1:24:17.31:0,17,2056	0/0:23,0:23:69.24:0,69,2222	0/0:9,0:9:27.08:0,27,766
chr10	44503531	.	C	CTTG	2229.03	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.732;DP=702;FS=0.667;HRun=0;HaplotypeScore=102.1105;InbreedingCoeff=0.9743;MQ=73.02;MQ0=0;MQRankSum=-2.471;QD=63.69;ReadPosRankSum=3.980;VQSLOD=5.2199;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,141,2549	1/1:1,4:6:12.04:279,12,0	0/0:28,0:27:75.55:0,76,1217	0/0:26,0:25:72:0,72,1201	0/0:18,0:18:54.17:0,54,976	0/0:15,0:15:45.14:0,45,786	0/0:35,0:35:99:0,99,1719	0/0:34,0:34:96.24:0,96,1612	0/0:22,0:22:63.21:0,63,1145	0/0:22,0:22:66.21:0,66,1144	0/0:5,0:5:15.02:0,15,245	0/0:28,0:28:84.26:0,84,1497	0/0:30,0:30:87.30:0,87,1611	0/0:21,0:21:57.18:0,57,1025	0/0:32,0:32:96.31:0,96,1727	0/0:28,0:28:84.26:0,84,1490	1/1:0,29:29:84.29:2067,84,0	0/0:36,0:36:99:0,108,1928	0/0:27,0:27:81.14:0,81,1331	0/0:11,0:11:33.10:0,33,578	0/0:73,0:73:99:0,214,3784	0/0:14,0:14:42.11:0,42,682	0/0:12,0:12:33.11:0,33,605	0/0:39,0:39:99:0,117,2101	0/0:12,0:12:33.11:0,33,609	0/0:19,0:19:54.17:0,54,949	0/0:24,0:24:72.21:0,72,1267	0/0:8,0:8:24.08:0,24,430
chr10	44503795	.	CTTTT	C	4947.92	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-4.764;DP=526;FS=19.603;HRun=16;HaplotypeScore=103.6579;InbreedingCoeff=0.9126;MQ=66.65;MQ0=7;MQRankSum=-0.342;QD=25.77;ReadPosRankSum=4.322;VQSLOD=2.2080;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,28:36:69.74:845,70,0	0/0:4,0:3:6.02:0,6,96	0/0:28,0:12:21.03:0,21,347	0/0:17,0:10:0.18:0,0,136	1/1:0,30:31:76.86:991,77,0	0/0:15,0:18:42.10:0,42,789	0/0:18,0:19:50.84:0,51,973	0/0:11,0:26:57.05:0,57,691	0/0:10,0:14:33.11:0,33,605	0/0:11,0:19:27.66:0,28,239	0/0:4,0:16:27.34:0,27,166	0/0:4,0:13:21.86:0,22,138	0/0:3,0:11:20.45:0,20,118	0/0:4,0:10:13.92:0,14,75	0/0:4,0:22:48.30:0,48,340	0/0:2,0:15:29.15:0,29,186	0/0:14,0:18:24.37:0,24,387	0/0:6,0:24:48.31:0,48,379	1/1:4,14:20:44.88:496,45,0	1/1:4,24:29:59.80:773,60,0	1/1:3,7:10:5.94:79,6,0	0/0:3,0:8:14.69:0,15,93	0/0:5,1:19:37.90:0,38,281	0/0:1,0:12:29.24:0,29,170	0/0:5,0:17:16.71:0,17,113	1/1:7,16:24:30.81:575,31,0	1/1:3,10:13:28.32:358,28,0	1/1:4,22:27:64.40:831,64,0
chr10	44504327	.	T	TAC	467.39	PASS	AB=1.000;AC=10;AF=0.185;AN=54;BaseQRankSum=4.038;DP=353;FS=3.542;HRun=0;HaplotypeScore=84.2580;InbreedingCoeff=0.3456;MQ=47.36;MQ0=1;MQRankSum=-7.023;QD=5.70;ReadPosRankSum=6.466;VQSLOD=2.1991;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:4.83:0,5,49	./.	0/0:6,0:5:11.34:0,11,125	0/0:2,0:1:3.01:0,3,43	0/0:18,0:18:11.70:0,12,122	1/1:14,0:14:0.47:1,0,0	0/0:14,0:14:9.03:0,9,126	1/1:18,0:18:35.85:374,36,0	0/0:9,0:9:8.81:0,9,68	0/1:14,0:14:0.85:1,0,81	0/0:13,0:13:4.39:0,4,30	0/0:12,0:12:7.84:0,8,93	0/0:21,0:21:18.03:0,18,250	0/0:22,0:22:10.10:0,10,117	0/0:5,0:5:3.01:0,3,44	1/1:14,0:14:0.47:1,0,0	1/1:0,9:10:12.04:194,12,0	0/0:6,0:6:1.13:0,1,19	0/0:6,0:6:5.20:0,5,107	0/0:10,0:10:14.41:0,14,109	0/1:12,0:12:16.71:17,0,117	0/0:26,0:26:11.94:0,12,141	0/0:20,0:20:13.18:0,13,108	0/0:9,0:9:3:0,3,25	0/0:19,0:19:8.24:0,8,96	0/0:16,0:16:10.61:0,11,192	0/0:18,0:18:10.07:0,10,133	0/0:3,0:3:2.96:0,3,19
chr10	44505927	.	CCT	C	244.82	PASS	AB=1.000;AC=6;AF=0.120;AN=50;BaseQRankSum=-2.821;DP=241;FS=4.655;HRun=0;HaplotypeScore=39.5337;InbreedingCoeff=0.4209;MQ=25.52;MQ0=75;MQRankSum=1.119;QD=4.53;ReadPosRankSum=0.114;VQSLOD=1.6396;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:11:15.15:0,15,108	0/1:2,0:2:0.01:0,0,0	./.	./.	1/1:12,0:10:0.47:1,0,0	0/0:11,0:7:6.47:0,6,52	0/0:14,0:9:8.93:0,9,75	1/1:7,15:18:37.18:333,37,0	0/0:4,0:3:5.99:0,6,49	0/0:13,0:8:17.85:0,18,222	./.	0/0:2,0:2:4.24:0,4,27	0/0:5,0:5:4.71:0,5,27	0/0:5,0:3:2.69:0,3,8	0/0:7,0:4:4.78:0,5,29	0/0:8,0:5:5.32:0,5,60	0/0:6,0:1:0.89:0,1,2	0/0:8,0:5:12.61:0,13,86	0/0:11,0:7:14.21:0,14,131	0/0:5,0:5:7.16:0,7,38	0/0:21,0:12:0:0,0,0	0/0:6,0:3:2.98:0,3,21	0/0:7,0:5:1.82:0,2,5	0/1:18,0:10:0.23:0,0,0	0/0:9,0:7:0.47:0,0,1	0/0:11,0:8:22.76:0,23,235	0/0:5,0:3:4.73:0,5,41	0/0:6,0:1:0:0,0,0
chr10	44506493	.	A	ACTCTCTCTCT	4001.56	PASS	AB=1.000;AC=32;AF=0.640;AN=50;BaseQRankSum=2.192;DP=634;FS=3.957;HRun=0;HaplotypeScore=199.2084;InbreedingCoeff=0.6437;MQ=61.62;MQ0=13;MQRankSum=-5.700;QD=9.50;ReadPosRankSum=-3.195;VQSLOD=1.4842;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:22:4.92:98,5,0	0/0:3,0:4:5.98:0,6,90	0/0:33,0:16:9.03:0,9,250	0/1:42,0:27:1.35:1,0,73	1/1:25,0:23:3.01:72,3,0	0/0:15,0:15:23.76:0,24,619	0/0:37,0:36:48.15:0,48,1317	1/1:33,0:33:30.05:536,30,0	0/0:16,0:16:27.09:0,27,750	1/1:30,0:29:22.28:534,22,0	./.	1/1:23,0:22:9.33:284,9,0	1/1:17,0:17:10.07:275,10,0	1/1:21,0:19:9.01:206,9,0	1/1:25,0:23:3.01:147,3,0	0/0:18,7:25:0.33:0,0,1	0/0:13,0:13:9.03:0,9,189	1/1:18,0:15:3.01:100,3,0	1/1:28,0:25:25.55:288,26,0	1/1:19,0:16:7.09:157,7,0	1/1:18,0:17:6.01:75,6,0	1/1:22,0:21:5.97:95,6,0	./.	0/0:21,0:22:0.94:0,1,2	0/1:15,0:12:0:0,0,0	1/1:32,0:31:25.89:583,26,0	1/1:29,0:29:21.91:549,22,0	./.
chr10	44506526	.	CTGTGTGTG	C	1767.28	PASS	AB=0.946;AC=19;AF=0.365;AN=52;BaseQRankSum=0.812;DP=504;FS=22.062;HRun=0;HaplotypeScore=137.2072;InbreedingCoeff=0.2462;MQ=40.44;MQ0=26;MQRankSum=-0.293;QD=7.82;ReadPosRankSum=-0.094;VQSLOD=1.1081;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:22:10.86:223,11,0	1/1:4,0:3:2.67:55,3,0	./.	./.	1/1:20,2:20:9.03:225,9,0	0/0:22,0:22:30:0,30,969	0/0:33,0:32:27.08:0,27,549	1/1:29,0:30:1.25:3,1,0	0/0:18,0:16:23.97:0,24,676	0/1:16,0:15:86.55:105,0,87	0/0:15,0:15:9.03:0,9,139	0/0:14,0:21:4.25:0,4,33	0/0:17,0:17:15.94:0,16,376	0/0:18,0:17:8.18:0,8,178	0/0:22,0:19:8.57:0,9,31	0/1:17,0:17:3.10:41,0,3	1/1:8,0:5:9.03:175,9,0	0/1:18,0:15:31.52:32,0,49	0/1:18,2:16:26.26:280,0,26	0/1:19,1:17:8.16:181,0,8	0/0:13,0:11:0.47:0,0,2	0/0:21,0:20:18.06:0,18,574	0/0:22,0:20:15.05:0,15,475	0/0:15,0:13:5.92:0,6,192	0/0:14,0:10:10.31:0,10,44	0/1:18,1:20:99:265,0,118	0/1:15,0:15:99:271,0,100	1/1:1,4:5:3.01:72,3,0
chr10	44506614	.	AC	A	1105.32	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.364;DP=590;FS=2.410;HRun=1;HaplotypeScore=81.2144;InbreedingCoeff=0.9896;MQ=88.65;MQ0=0;MQRankSum=-3.722;QD=32.51;ReadPosRankSum=1.544;VQSLOD=3.4896;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:66.20:0,66,984	1/1:0,8:8:21.07:290,21,0	0/0:28,0:28:75.66:0,76,938	0/0:22,0:22:66.19:0,66,932	0/0:18,0:18:48.15:0,48,712	0/0:18,0:18:54.18:0,54,825	0/0:35,0:35:99:0,105,1581	0/0:32,0:32:96.30:0,96,1424	0/0:20,0:20:60.19:0,60,883	0/0:29,0:29:87.30:0,87,1332	0/0:11,0:11:33.11:0,33,504	0/0:20,0:20:51.16:0,51,759	0/0:18,0:18:51.16:0,51,748	0/0:15,0:15:45.15:0,45,684	0/0:19,0:19:57.11:0,57,802	0/0:29,0:29:84.15:0,84,1250	1/1:0,26:26:69.19:936,69,0	0/0:15,0:15:39.03:0,39,510	0/0:16,0:16:45.12:0,45,647	0/0:23,0:23:69.23:0,69,1048	0/0:26,0:26:69.18:0,69,987	0/0:22,0:22:66.21:0,66,984	0/0:13,0:13:39.13:0,39,596	0/0:20,0:20:42.08:0,42,579	0/0:25,0:25:75.21:0,75,1084	0/0:22,0:22:63.12:0,63,856	0/0:25,0:25:75.22:0,75,1102	0/0:8,0:8:15.05:0,15,213
chr10	44506835	.	T	TACAC	4592.35	PASS	AB=0.812;AC=34;AF=0.630;AN=54;BaseQRankSum=0.761;DP=565;FS=4.579;HRun=0;HaplotypeScore=111.8380;InbreedingCoeff=0.6964;MQ=64.58;MQ0=10;MQRankSum=-1.785;QD=12.31;ReadPosRankSum=-1.512;VQSLOD=4.0531;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:20,8:31:8.86:114,9,0	1/1:7,0:7:3.01:56,3,0	1/1:39,0:20:1.25:3,1,0	./.	1/1:18,2:21:3.01:71,3,0	0/0:16,0:17:18.52:0,19,265	0/0:26,0:29:33.07:0,33,429	1/1:39,0:38:34.74:494,35,0	0/0:13,0:15:24.05:0,24,309	1/1:20,0:19:30:290,30,0	1/1:2,4:7:9.03:214,9,0	0/0:14,0:15:12.03:0,12,154	0/0:12,0:12:18.06:0,18,283	0/0:15,0:16:26.97:0,27,355	0/1:14,6:24:14.95:500,0,15	1/1:8,11:27:27.30:583,27,0	1/1:31,0:31:29.47:389,29,0	1/1:9,9:18:30.10:684,30,0	1/1:10,4:15:20.19:364,20,0	1/1:7,0:14:5.75:64,6,0	1/1:29,0:28:11.60:152,12,0	0/0:6,0:6:9.03:0,9,142	0/0:8,0:10:11.98:0,12,141	0/0:35,0:35:54.18:0,54,846	1/1:6,5:11:8.77:155,9,0	0/1:11,0:13:15.33:53,0,15	1/1:9,0:16:12.51:225,13,0	1/1:8,0:8:12.01:180,12,0
chr10	44506836	.	A	ACACG	2424.54	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=9.571;DP=581;FS=8.367;HRun=0;HaplotypeScore=120.8085;InbreedingCoeff=-0.1049;MQ=63.38;MQ0=10;MQRankSum=-1.214;QD=7.90;ReadPosRankSum=2.251;VQSLOD=1.6923;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:32,0:32:26.02:26,0,179	1/1:7,0:7:14.86:159,15,0	0/0:38,0:19:51.04:0,51,495	0/0:38,0:18:29.09:0,29,297	0/1:21,0:21:13.34:13,0,208	0/0:21,0:20:39.03:0,39,493	0/0:29,0:29:72.06:0,72,875	0/1:39,0:38:99:164,0,440	0/0:17,0:17:48.05:0,48,622	0/0:20,0:19:9.94:0,10,200	0/1:7,0:7:35.87:124,0,36	0/0:14,0:14:30.01:0,30,339	0/0:13,0:13:33:0,33,459	0/0:16,0:16:45.03:0,45,595	0/1:26,0:25:99:285,0,188	0/1:28,0:28:86.62:338,0,87	1/1:11,22:36:38.36:592,38,0	0/1:18,0:17:69.71:401,0,70	0/1:15,0:15:99:179,0,113	0/1:15,0:15:22.35:22,0,45	0/1:28,0:27:24.27:24,0,236	0/0:8,0:8:17.98:0,18,238	0/0:11,0:11:24.02:0,24,292	0/0:35,0:35:99:0,102,1413	0/1:12,0:11:57.27:77,0,57	0/0:14,0:14:21.32:0,21,173	0/1:15,0:15:99:122,0,107	0/1:8,0:8:30.44:72,0,30
chr10	44506838	.	A	ACG	637.46	PASS	AB=1.000;AC=12;AF=0.214;AN=56;BaseQRankSum=10.834;DP=588;FS=3.583;HRun=0;HaplotypeScore=110.5573;InbreedingCoeff=0.1432;MQ=62.20;MQ0=10;MQRankSum=-2.427;QD=3.54;ReadPosRankSum=4.372;VQSLOD=2.1536;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:11.30:0,11,212	1/1:6,0:6:14.86:113,15,0	0/0:38,0:19:52.30:0,52,500	0/0:39,0:17:32.08:0,32,321	0/0:21,0:21:28.81:0,29,239	0/0:21,0:20:47.36:0,47,497	0/0:28,0:28:72:0,72,757	0/0:40,0:39:62.55:0,63,641	0/0:17,0:17:48:0,48,523	0/0:22,0:21:10.82:0,11,202	0/0:7,0:7:3.77:0,4,47	0/0:15,0:15:36.87:0,37,359	0/0:12,0:12:36:0,36,418	0/0:17,0:17:44.98:0,45,500	0/1:26,0:25:35.30:35,0,204	0/1:28,0:28:9.44:9,0,122	1/1:30,6:36:37.67:544,38,0	0/1:19,0:18:19.23:19,0,92	0/1:14,0:14:27.81:28,0,127	0/1:15,0:15:9.71:10,0,65	0/0:29,0:28:34.92:0,35,278	0/0:8,0:8:21:0,21,233	0/0:11,0:11:26.99:0,27,280	0/0:35,0:35:99:0,102,1213	0/1:13,0:12:9.33:9,0,60	0/0:14,0:14:15.11:0,15,211	0/1:15,0:15:16.70:17,0,108	0/1:8,0:8:10.39:10,0,32
chr10	44507273	.	CCAAA	C	1445.69	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.418;DP=768;FS=0.717;HRun=0;HaplotypeScore=130.5007;InbreedingCoeff=0.9979;MQ=89.51;MQ0=1;MQRankSum=-5.497;QD=48.19;ReadPosRankSum=-4.013;VQSLOD=3.4163;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,108,2855	0/0:9,0:9:24.08:0,24,658	0/0:29,0:29:75.22:0,75,1856	0/0:30,0:30:71.36:0,71,1804	0/0:34,0:34:93.31:0,93,2436	0/0:18,0:18:48.16:0,48,1315	0/0:17,0:17:51.16:0,51,1339	1/1:2,28:30:84.26:1541,84,0	0/0:32,0:32:96.33:0,96,2585	0/0:27,0:27:75.25:0,75,1982	0/0:26,0:26:78.26:0,78,2060	0/0:29,0:29:78.26:0,78,2078	0/0:34,0:34:99:0,102,2793	0/0:20,0:20:57.19:0,57,1503	0/0:40,0:40:99:0,117,3030	0/0:31,0:31:93.31:0,93,2453	0/0:34,0:34:99:0,99,2604	0/0:15,0:14:42.14:0,42,1151	0/0:23,0:23:63.21:0,63,1661	0/0:26,0:26:78.26:0,78,2081	0/0:47,0:47:99:0,138,3757	0/0:26,0:26:75.25:0,75,1995	0/0:28,0:28:84.25:0,84,2203	0/0:29,0:29:87.27:0,87,2270	0/0:27,0:27:78.27:0,78,2128	0/0:26,0:26:78.27:0,78,2137	0/0:25,0:24:72.25:0,72,1958	0/0:20,0:20:57.20:0,57,1561
chr10	44507381	.	GAC	G	930.61	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.643;DP=703;FS=1.572;HRun=0;HaplotypeScore=89.5560;InbreedingCoeff=0.9836;MQ=85.06;MQ0=1;MQRankSum=-4.660;QD=35.79;ReadPosRankSum=-0.870;VQSLOD=5.5360;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,123,2300	1/1:0,4:4:11.96:154,12,0	0/0:20,0:20:57.09:0,57,984	0/0:27,0:27:58.67:0,59,1126	0/0:23,0:23:66.21:0,66,1238	0/0:22,0:22:63.20:0,63,1172	0/0:16,0:16:45.15:0,45,860	0/0:32,0:32:93.17:0,93,1562	0/0:34,0:34:99:0,102,1887	0/0:25,0:25:75.25:0,75,1416	0/0:20,0:20:60.21:0,60,1155	0/0:17,0:17:51.16:0,51,942	0/0:26,0:26:75.22:0,75,1379	0/0:27,0:27:78.24:0,78,1438	0/0:38,0:38:99:0,111,2045	0/0:31,0:31:93.28:0,93,1689	1/1:1,21:22:60.19:893,60,0	0/0:16,0:16:45.11:0,45,767	0/0:17,0:17:51.14:0,51,917	0/0:35,0:35:99:0,102,1898	0/0:58,0:57:99:0,163,3053	0/0:25,0:25:72.23:0,72,1342	0/0:20,0:20:60.18:0,60,1089	0/0:18,0:18:54.19:0,54,1042	0/0:21,0:21:63.19:0,63,1181	0/0:31,0:31:90.29:0,90,1705	0/0:18,0:18:54.17:0,54,977	0/0:17,0:17:51.17:0,51,984
chr10	44507411	.	GT	G	643.54	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.574;DP=623;FS=0.000;HRun=1;HaplotypeScore=67.7423;InbreedingCoeff=0.9690;MQ=80.95;MQ0=0;MQRankSum=-7.506;QD=30.64;ReadPosRankSum=1.118;VQSLOD=3.2778;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,111,1753	1/1:0,3:3:8.99:97,9,0	0/0:14,0:14:42.11:0,42,626	0/0:21,0:21:62.77:0,63,831	0/0:20,0:20:60.19:0,60,936	0/0:16,0:16:48.14:0,48,701	0/0:16,0:16:48.11:0,48,711	0/0:30,0:30:87.28:0,87,1349	0/0:34,0:34:99:0,102,1605	0/0:23,0:23:69.23:0,69,1060	0/0:22,0:22:66.21:0,66,1031	0/0:21,0:21:60.20:0,60,956	0/0:22,0:22:66.23:0,66,1053	0/0:27,0:27:81.28:0,81,1291	0/0:38,0:38:99:0,114,1796	0/0:31,0:31:93.29:0,93,1439	1/1:0,18:18:51.17:660,51,0	0/0:16,0:16:48.16:0,48,767	0/0:21,0:21:63.14:0,63,913	0/0:21,0:21:63.21:0,63,985	0/0:45,0:45:99:0,135,2113	0/0:17,0:17:48.09:0,48,735	0/0:16,0:16:48.16:0,48,765	0/0:19,0:19:57.18:0,57,887	0/0:14,0:14:42.11:0,42,623	0/0:21,0:21:63.21:0,63,1007	0/0:21,0:21:63.20:0,63,983	0/0:19,0:19:57.19:0,57,911
chr10	44507454	.	CA	C	1048.41	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.255;DP=714;FS=0.000;HRun=1;HaplotypeScore=79.6334;InbreedingCoeff=0.9959;MQ=87.46;MQ0=0;MQRankSum=-5.277;QD=34.95;ReadPosRankSum=0.415;VQSLOD=3.5228;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,111,1768	1/1:0,10:10:30.10:419,30,0	0/0:30,1:31:78.87:0,79,1351	0/0:23,0:23:66.22:0,66,1024	0/0:28,0:28:81.27:0,81,1277	0/0:23,0:23:69.21:0,69,1056	0/0:12,0:12:36.11:0,36,549	0/0:31,0:31:90.26:0,90,1388	0/0:34,0:34:99:0,102,1621	0/0:21,0:21:57.19:0,57,883	0/0:27,0:27:81.26:0,81,1270	0/0:22,0:22:63.21:0,63,1006	0/0:24,0:24:72.25:0,72,1150	0/0:21,0:21:63.18:0,63,955	0/0:44,0:44:99:0,129,2032	0/0:28,0:28:84.26:0,84,1295	1/1:0,20:20:57.10:751,57,0	0/0:20,0:20:18.48:0,18,810	0/0:17,0:17:51.17:0,51,787	0/0:21,0:21:60.16:0,60,909	0/0:47,0:47:99:0,138,2175	0/0:23,0:23:63.21:0,63,997	0/0:22,0:22:66.23:0,66,1054	0/0:23,0:23:69.24:0,69,1102	0/0:23,0:23:69.24:0,69,1102	0/0:31,0:31:93.30:0,93,1439	0/0:30,0:30:87.25:0,87,1335	0/0:21,0:21:63.14:0,63,911
chr10	44508011	.	AC	A	1142.85	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.941;DP=596;FS=0.000;HRun=3;HaplotypeScore=62.9412;InbreedingCoeff=0.9971;MQ=87.90;MQ0=0;MQRankSum=-3.603;QD=32.65;ReadPosRankSum=1.290;VQSLOD=3.8080;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:72.21:0,72,981	1/1:0,10:10:30.09:372,30,0	0/0:22,0:22:28.17:0,28,681	0/0:19,0:19:56.18:0,56,721	0/0:19,0:19:57.15:0,57,765	0/0:17,0:17:48.14:0,48,667	0/0:20,0:20:57.18:0,57,803	0/0:26,0:26:75.25:0,75,1071	0/0:28,0:28:78.25:0,78,1107	0/0:21,0:21:57.16:0,57,756	0/0:12,0:12:36.11:0,36,502	0/0:25,0:25:66.22:0,66,950	0/0:19,0:19:57.17:0,57,781	0/0:25,0:25:75.24:0,75,1063	0/0:20,0:20:60.18:0,60,829	0/0:19,0:19:57.19:0,57,821	1/1:0,25:25:72.23:893,72,0	0/0:21,0:21:63.21:0,63,907	0/0:8,0:8:21.05:0,21,265	0/0:18,0:18:45.11:0,45,586	0/0:42,0:42:99:0,117,1663	0/0:23,0:23:54.12:0,54,689	0/0:17,0:17:45.12:0,45,595	0/0:26,0:26:75.21:0,75,1022	0/0:22,0:22:63.17:0,63,848	0/0:22,0:22:63.20:0,63,890	0/0:25,0:25:75.25:0,75,1073	0/0:18,0:18:54.16:0,54,757
chr10	44508277	.	G	GT	1037.10	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.381;DP=603;FS=5.529;HRun=6;HaplotypeScore=63.8623;InbreedingCoeff=0.9968;MQ=77.07;MQ0=0;MQRankSum=-2.940;QD=28.03;ReadPosRankSum=0.972;VQSLOD=4.3859;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:69.15:0,69,702	1/1:1,12:13:30.09:366,30,0	0/0:26,0:26:60.14:0,60,672	0/0:14,0:14:21.11:0,21,271	0/0:31,0:31:81.18:0,81,825	0/0:23,0:23:54.10:0,54,543	0/0:22,0:22:63.12:0,63,634	0/0:33,0:33:69.14:0,69,704	0/0:14,0:14:39.09:0,39,397	0/0:20,0:20:54.11:0,54,547	0/0:21,0:21:54.12:0,54,551	0/0:17,0:17:45.09:0,45,452	0/0:24,0:24:60.11:0,60,605	0/0:15,0:15:39.09:0,39,398	0/0:17,0:17:48.04:0,48,471	0/0:26,0:26:57.13:0,57,581	1/1:2,22:24:63.20:792,63,0	0/0:25,0:25:63.14:0,63,643	0/0:14,0:14:33.06:0,33,331	0/0:39,0:39:99:0,105,1071	0/0:10,0:10:27.04:0,27,268	0/0:25,0:25:69.15:0,69,704	0/0:21,0:21:57.13:0,57,582	0/0:16,0:16:45.10:0,45,459	0/0:17,0:17:48.11:0,48,489	0/0:22,0:22:63.14:0,63,642	0/0:37,0:37:99:0,111,1117	0/0:12,0:12:36.08:0,36,367
chr10	44508965	.	G	GT	3938.84	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-8.518;DP=484;FS=0.427;HRun=8;HaplotypeScore=45.3687;InbreedingCoeff=0.9683;MQ=70.14;MQ0=1;MQRankSum=0.146;QD=26.79;ReadPosRankSum=2.729;VQSLOD=4.1183;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:66.02:0,66,602	1/1:0,7:7:21.06:242,21,0	0/0:13,0:10:14.99:0,15,134	0/0:7,0:7:11.96:0,12,98	0/0:27,0:27:65.51:0,66,583	0/0:18,0:18:48.02:0,48,439	0/0:14,0:14:42.01:0,42,379	0/0:40,0:37:86.98:0,87,789	0/0:15,0:14:26.98:0,27,240	1/1:1,12:14:36.11:416,36,0	1/1:2,16:18:45.09:505,45,0	0/0:8,0:8:23.99:0,24,211	0/0:13,0:13:27:0,27,247	0/0:16,0:16:41.99:0,42,375	1/1:1,7:8:15.04:173,15,0	1/1:5,7:12:21.06:242,21,0	1/1:5,29:34:84.25:969,84,0	1/1:5,31:36:89.74:1003,90,0	0/0:16,0:16:32.97:0,33,287	0/0:21,0:21:59.95:0,60,532	0/0:9,0:9:15:0,15,137	0/0:12,0:12:20.99:0,21,188	0/0:10,0:10:24:0,24,217	0/0:5,0:5:8.98:0,9,78	1/1:4,13:18:11.65:388,12,0	0/0:24,0:24:51:0,51,463	0/0:22,0:21:56.99:0,57,508	0/0:21,0:21:60.03:0,60,549
chr10	44509266	.	CTTACACTCAG	C	1264.16	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.105;DP=624;FS=3.741;HRun=0;HaplotypeScore=180.1681;InbreedingCoeff=0.9952;MQ=89.67;MQ0=0;MQRankSum=-6.327;QD=79.01;ReadPosRankSum=-0.076;VQSLOD=3.1748;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:96.30:0,96,4836	1/1:0,7:7:21.07:692,21,0	0/0:21,0:21:51.17:0,51,2272	0/0:25,0:26:69.23:0,69,3217	0/0:24,0:23:69.24:0,69,3374	0/0:25,0:25:75.26:0,75,3681	0/0:24,0:24:72.23:0,72,3360	0/0:29,0:29:84.29:0,84,3928	0/0:22,0:22:63.22:0,63,3163	0/0:34,0:34:99:0,99,4978	0/0:9,0:9:27.09:0,27,1403	0/0:15,0:15:39.13:0,39,1887	0/0:20,0:20:57.20:0,57,2713	0/0:20,0:20:60.21:0,60,3147	0/0:35,0:34:99:0,102,5168	0/0:27,0:27:81.28:0,81,4283	1/1:0,9:9:21.07:692,21,0	0/0:16,0:16:42.14:0,42,2216	0/0:23,0:23:69.21:0,69,2927	0/0:13,0:13:39.13:0,39,2039	0/0:36,0:36:99:0,99,4906	0/0:18,0:18:54.17:0,54,2722	0/0:14,0:14:39.13:0,39,2061	0/0:20,0:20:57.17:0,57,2882	0/0:15,0:15:45.15:0,45,2248	0/0:31,0:31:90.31:0,90,4604	0/0:38,0:38:99:0,105,5407	0/0:20,0:20:60.21:0,60,3166
chr10	44509459	.	G	GT	1591.91	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.982;DP=711;FS=0.600;HRun=1;HaplotypeScore=71.4275;InbreedingCoeff=0.9993;MQ=81.23;MQ0=0;MQRankSum=-1.664;QD=37.90;ReadPosRankSum=1.869;VQSLOD=4.3071;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,114,1440	1/1:0,10:10:27.09:404,27,0	0/0:18,0:18:50.67:0,51,577	0/0:23,0:23:44.59:0,45,593	0/0:28,0:28:78.25:0,78,1011	0/0:14,0:14:42.13:0,42,533	0/0:26,0:26:78.24:0,78,997	0/0:22,0:22:66.21:0,66,857	0/0:28,0:28:81.26:0,81,1052	0/0:24,0:24:72.22:0,72,909	0/0:18,0:18:45.15:0,45,583	0/0:28,0:28:81.25:0,81,1038	0/0:21,0:21:63.20:0,63,817	0/0:18,0:18:51.17:0,51,662	0/0:37,0:36:99:0,108,1401	0/0:28,0:28:84.27:0,84,1090	1/1:1,31:32:54.36:1309,54,0	0/0:20,0:20:57.19:0,57,740	0/0:22,0:22:66.20:0,66,838	0/0:14,0:14:39.13:0,39,506	0/0:66,0:66:99:0,199,2541	0/0:19,0:19:51.17:0,51,661	0/0:12,0:12:36.10:0,36,452	0/0:49,0:49:99:0,147,1888	0/0:19,0:18:51.15:0,51,644	0/0:34,0:34:99:0,102,1299	0/0:27,0:27:81.21:0,81,1006	0/0:15,0:15:45.15:0,45,583
chr10	44509804	.	TGCGCGCGCGCGCGTGCGCGCGCGC	T	1236.72	PASS	AB=0.890;AC=7;AF=0.130;AN=54;BaseQRankSum=5.975;DP=355;FS=5.303;HRun=0;HaplotypeScore=190.1125;InbreedingCoeff=0.0243;MQ=68.83;MQ0=2;MQRankSum=-4.965;QD=12.62;ReadPosRankSum=-2.442;VQSLOD=2.1245;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:22:24.52:0,25,925	./.	0/0:5,0:5:6.01:0,6,94	0/1:15,0:11:25.71:26,0,216	0/0:21,0:21:27.08:0,27,912	0/0:7,0:7:20.97:0,21,1056	0/0:14,0:14:33.08:0,33,2174	0/0:10,0:10:20.46:0,20,348	0/0:3,0:3:3.01:0,3,293	0/0:8,0:8:18.06:0,18,740	0/0:6,0:6:12.04:0,12,514	0/1:13,0:13:99:328,0,159	0/1:19,0:20:99:415,0,159	0/1:22,0:23:39.97:140,0,40	0/0:9,0:9:0.63:0,1,856	0/0:16,0:16:36.12:0,36,1831	0/1:1,6:7:46.26:396,0,46	0/0:20,0:20:51.09:0,51,2194	0/0:15,0:15:39.10:0,39,1789	0/0:7,0:7:9.03:0,9,559	0/0:19,0:19:37.64:0,38,2344	0/0:11,0:13:3.26:0,3,65	0/0:4,0:4:3.01:0,3,73	1/1:17,0:20:5.60:56,6,0	0/0:11,0:11:20.24:0,20,1001	0/0:14,0:13:33.11:0,33,2093	0/0:13,0:13:18.84:0,19,1114	0/0:12,0:12:24.01:0,24,1202
chr10	44509813	.	GCGCGTGCGCGCGCGCGCACACACA	G	1667.12	PASS	AB=1.000;AC=13;AF=0.250;AN=52;BaseQRankSum=5.368;DP=325;FS=1.004;HRun=0;HaplotypeScore=155.4052;InbreedingCoeff=0.4700;MQ=56.60;MQ0=8;MQRankSum=-5.993;QD=13.78;ReadPosRankSum=-0.720;VQSLOD=2.4061;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:18:9.50:0,10,465	./.	0/0:2,0:2:2.60:0,3,10	0/0:8,0:4:8.39:0,8,103	0/0:16,0:16:12.03:0,12,252	0/0:5,0:5:12.03:0,12,544	0/0:11,0:11:24.08:0,24,1864	0/0:14,0:13:15.43:0,15,191	0/0:2,0:2:3.01:0,3,194	0/0:8,0:8:18.04:0,18,726	0/0:10,0:9:11.87:0,12,368	1/1:4,10:14:9.03:534,9,0	1/1:6,14:20:15.48:683,15,0	1/1:7,15:22:3.01:199,3,0	0/0:8,0:8:15.05:0,15,401	0/0:13,0:13:27.08:0,27,960	0/1:8,0:7:38.22:236,0,38	0/0:21,0:20:40.90:0,41,1871	0/1:11,0:11:3.11:3,0,1027	0/0:8,0:8:6.02:0,6,316	0/0:18,0:16:32.03:0,32,1284	1/1:6,0:11:1.36:3,1,0	./.	1/1:6,14:20:5.24:123,5,0	0/0:11,0:11:14.73:0,15,387	0/0:14,0:13:34.35:0,34,1347	0/1:14,0:14:31.36:31,0,487	0/0:10,0:10:21.96:0,22,840
chr10	44509814	.	CGCGT	C	1943.53	PASS	AB=1.000;AC=29;AF=0.558;AN=52;BaseQRankSum=2.768;DP=304;FS=3.281;HRun=0;HaplotypeScore=74.1715;InbreedingCoeff=0.5141;MQ=57.55;MQ0=8;MQRankSum=-3.143;QD=9.57;ReadPosRankSum=0.106;VQSLOD=2.4485;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:18:8.62:0,9,106	./.	1/1:2,0:2:2.04:6,2,0	0/0:8,0:4:5.81:0,6,54	0/1:16,0:16:7.98:8,0,20	0/0:5,0:5:9.02:0,9,153	0/0:10,0:10:24.04:0,24,410	1/1:3,10:12:15.64:167,16,0	0/0:2,0:2:3.01:0,3,49	1/1:8,0:8:13.05:128,13,0	1/1:9,1:9:11.98:157,12,0	0/1:13,0:13:1.47:29,0,1	1/1:16,0:16:12.01:112,12,0	1/1:16,0:17:3:28,3,0	1/1:7,0:7:11.96:154,12,0	1/1:12,0:12:26.90:330,27,0	1/1:8,0:7:6.01:57,6,0	1/1:19,2:20:50.50:655,51,0	0/0:11,0:11:15.68:0,16,175	0/0:8,0:8:5.99:0,6,50	0/0:18,0:16:31.28:0,31,235	0/1:7,0:7:0:1,0,0	./.	1/1:19,0:18:2.98:41,3,0	1/1:10,0:10:14.95:205,15,0	0/0:14,0:13:11.47:0,11,136	0/1:14,0:14:10.13:10,0,71	0/1:10,0:10:32.34:32,0,79
chr10	44509816	.	CGT	C	1304.48	PASS	AB=1.000;AC=30;AF=0.577;AN=52;BaseQRankSum=5.662;DP=298;FS=9.328;HRun=0;HaplotypeScore=69.3028;InbreedingCoeff=0.4109;MQ=57.62;MQ0=8;MQRankSum=-1.474;QD=6.15;ReadPosRankSum=3.040;VQSLOD=1.8794;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:19:8.79:0,9,64	./.	1/1:1,0:2:0.89:2,1,0	0/0:7,0:3:5.81:0,6,54	0/1:15,0:15:7.98:8,0,20	0/0:4,0:4:9.02:0,9,109	0/0:10,0:10:24.04:0,24,297	1/1:12,0:11:15.64:117,16,0	0/0:2,0:2:3:0,3,25	1/1:0,8:8:14.72:115,15,0	1/1:10,0:9:11.98:108,12,0	0/1:13,0:13:6.12:6,0,13	1/1:16,0:16:11.15:54,11,0	1/1:16,0:17:2.84:14,3,0	1/1:6,1:7:11.96:105,12,0	1/1:11,0:11:26.89:235,27,0	1/1:8,0:7:5.68:28,6,0	1/1:20,0:19:50.71:459,51,0	0/0:11,0:11:4.33:0,4,98	0/0:8,0:8:5.99:0,6,50	0/0:18,0:16:16.90:0,17,161	0/1:7,0:7:0:0,0,0	./.	1/1:19,0:18:2.98:29,3,0	1/1:9,1:10:14.96:147,15,0	0/1:13,0:12:11.53:12,0,38	0/1:14,0:14:9.71:10,0,71	0/1:10,0:10:25.43:25,0,55
chr10	44509827	.	GCGCACACACACACACA	G	1714.65	PASS	AB=0.904;AC=26;AF=0.565;AN=46;BaseQRankSum=2.383;DP=302;FS=2.506;HRun=0;HaplotypeScore=113.2186;InbreedingCoeff=0.1864;MQ=46.94;MQ0=12;MQRankSum=0.231;QD=7.17;ReadPosRankSum=1.116;VQSLOD=1.9916;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:2,17:18:0:0,0,0	./.	./.	./.	0/1:0,14:14:0:0,0,0	0/0:3,0:3:8.97:0,9,249	0/0:9,0:9:21.93:0,22,869	0/1:19,0:18:4.47:4,0,148	0/0:2,0:2:3.01:0,3,90	0/0:13,0:13:23.57:0,24,1587	0/1:10,0:9:3.49:3,0,238	1/1:13,0:13:9.02:150,9,0	1/1:16,0:16:5.12:116,5,0	1/1:19,0:19:3.01:66,3,0	0/1:7,0:7:4.47:4,0,197	0/1:8,0:7:0.01:0,0,221	0/1:9,0:7:11.65:12,0,77	0/1:20,0:19:86.82:87,0,1021	1/1:1,6:7:17.91:279,18,0	./.	1/1:12,0:10:12:147,12,0	0/1:13,0:12:0:0,0,0	./.	1/1:23,0:20:3.07:12,3,0	0/1:15,0:15:13.39:13,0,632	0/1:2,13:14:78.83:375,0,79	1/1:3,8:11:11.94:527,12,0	1/1:8,0:8:7.88:58,8,0
chr10	44509879	.	ATG	A	141.30	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=3.866;DP=387;FS=5.385;HRun=0;HaplotypeScore=90.8046;InbreedingCoeff=0.6915;MQ=59.18;MQ0=13;MQRankSum=-2.928;QD=6.42;ReadPosRankSum=-1.363;VQSLOD=2.4192;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:20:30:0,30,461	1/1:3,8:11:15:167,15,0	0/0:15,0:9:4.37:0,4,319	0/0:8,0:4:6.01:0,6,63	0/0:14,0:14:27.09:0,27,426	0/0:13,0:12:9.84:0,10,353	0/0:18,0:18:29.79:0,30,533	0/0:12,0:12:36.07:0,36,571	0/0:3,0:3:5.84:0,6,66	0/0:18,0:16:32.08:0,32,771	0/0:10,0:9:6.02:0,6,103	0/0:11,0:11:24.04:0,24,316	0/0:14,0:14:24.01:0,24,286	0/0:12,0:12:20.56:0,21,288	0/0:10,0:10:18.53:0,19,299	0/0:7,0:6:12.04:0,12,196	1/1:1,10:10:6.02:81,6,0	0/0:23,0:23:42.23:0,42,802	0/0:16,0:15:38.36:0,38,607	0/0:10,0:10:21.07:0,21,347	0/0:14,0:12:13.28:0,13,242	0/0:17,0:16:33.11:0,33,527	0/0:12,0:12:24.08:0,24,374	0/0:20,0:19:15.03:0,15,234	0/0:22,0:22:30.57:0,31,516	0/0:18,0:18:43.68:0,44,577	0/0:14,0:14:30:0,30,368	0/0:13,0:12:25.04:0,25,477
chr10	44510035	.	C	CACAGATGG	5939.80	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-3.753;DP=571;FS=10.852;HRun=0;HaplotypeScore=142.1883;InbreedingCoeff=0.9940;MQ=86.34;MQ0=0;MQRankSum=-10.659;QD=84.85;ReadPosRankSum=-4.186;VQSLOD=3.8869;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:93.25:0,93,2345	1/1:5,9:18:45.03:1652,45,0	0/0:15,0:15:39.13:0,39,945	0/0:32,0:32:63.16:0,63,1561	0/0:26,0:26:72.25:0,72,1908	0/0:16,0:16:48.13:0,48,1188	0/0:19,0:19:54.12:0,54,1386	1/1:8,23:32:81.28:3134,81,0	0/0:17,0:17:51.17:0,51,1313	0/0:18,0:18:45.15:0,45,1181	0/0:6,0:6:15.05:0,15,407	0/0:16,0:16:42.14:0,42,1106	0/0:24,0:24:69.24:0,69,1867	0/0:19,0:19:57.20:0,57,1514	0/0:26,0:26:66.23:0,66,1717	0/0:28,0:28:75.25:0,75,1912	1/1:6,4:20:33.11:1154,33,0	0/0:25,0:25:63.22:0,63,1695	0/0:17,0:17:42.13:0,42,1071	0/0:14,0:14:39.13:0,39,1054	0/0:30,0:30:78.25:0,78,2058	0/0:14,0:14:36.12:0,36,976	0/0:13,0:13:39.13:0,39,1046	0/0:25,0:25:66.23:0,66,1711	0/0:12,0:12:36.12:0,36,976	0/0:22,0:22:60.20:0,60,1573	0/0:25,0:25:69.24:0,69,1826	0/0:11,0:11:33.11:0,33,844
chr10	44510631	.	AG	A	97.15	PASS	AB=0.731;AC=1;AF=0.018;AN=56;BaseQRankSum=5.336;DP=674;FS=2.663;HRun=6;HaplotypeScore=71.4903;InbreedingCoeff=-0.0182;MQ=81.69;MQ0=0;MQRankSum=-1.785;QD=5.11;ReadPosRankSum=1.322;VQSLOD=-0.4000;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,141,1823	0/1:12,7:19:99:172,0,344	0/0:18,0:18:32.59:0,33,576	0/0:22,0:22:42.51:0,43,684	0/0:16,0:16:42.14:0,42,552	0/0:19,0:19:51.16:0,51,658	0/0:48,0:48:99:0,138,1798	0/0:30,0:30:81.25:0,81,1039	0/0:23,0:23:69.20:0,69,890	0/0:12,0:12:33.10:0,33,418	0/0:17,0:17:51.16:0,51,656	0/0:24,0:24:72.22:0,72,932	0/0:21,0:21:54.18:0,54,710	0/0:32,0:32:90.28:0,90,1170	0/0:22,0:22:66.21:0,66,868	0/0:29,0:29:75.24:0,75,986	0/0:69,0:68:67.36:0,67,1231	0/0:12,0:12:36.12:0,36,473	0/0:15,0:15:36.12:0,36,473	0/0:13,0:13:39.09:0,39,471	0/0:39,0:39:99:0,108,1363	0/0:15,0:15:42.12:0,42,536	0/0:15,0:15:33.58:0,34,434	0/0:26,0:26:78.24:0,78,1011	0/0:13,0:13:36.11:0,36,460	0/0:19,0:19:54.18:0,54,711	0/0:24,0:24:72.22:0,72,932	0/0:10,0:10:30.08:0,30,367
chr10	44511007	.	CGTGTGTGTGTGT	C	2472.16	PASS	AB=0.688;AC=10;AF=0.179;AN=56;BaseQRankSum=5.191;DP=553;FS=6.714;HRun=0;HaplotypeScore=196.4821;InbreedingCoeff=0.6547;MQ=65.41;MQ0=13;MQRankSum=-7.813;QD=21.31;ReadPosRankSum=-0.541;VQSLOD=1.6639;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:23:24.06:0,24,542	0/0:11,0:11:12.04:0,12,435	0/0:28,0:15:3:0,3,25	0/0:28,0:20:5.99:0,6,118	0/0:16,0:20:38.92:0,39,1083	0/0:24,0:31:45.14:0,45,1920	0/0:11,0:12:27.09:0,27,1270	0/0:22,0:22:17.07:0,17,257	0/0:10,0:12:27.08:0,27,1155	0/0:14,0:17:24.08:0,24,708	0/0:5,0:8:9.03:0,9,190	0/1:6,8:16:8.18:307,0,8	1/1:9,9:19:24.55:798,25,0	1/1:7,13:20:21.03:622,21,0	0/0:12,0:17:30.10:0,30,1156	0/0:9,0:20:33.10:0,33,1043	0/0:34,0:34:18.93:0,19,473	0/0:8,0:17:27.09:0,27,927	0/0:10,0:11:9.02:0,9,174	0/0:9,0:12:15.05:0,15,374	0/0:21,0:27:24.08:0,24,633	0/1:13,0:19:60.10:202,0,60	1/1:8,14:23:17.98:516,18,0	1/1:15,3:19:5.72:187,6,0	0/0:9,0:19:27.09:0,27,904	0/0:18,0:24:36.12:0,36,926	0/0:14,0:23:36.12:0,36,853	0/0:5,0:14:24.08:0,24,534
chr10	44511052	.	GTTTACCTCAAA	G	543.25	PASS	AB=0.793;AC=3;AF=0.054;AN=56;BaseQRankSum=2.358;DP=560;FS=15.045;HRun=0;HaplotypeScore=199.4494;InbreedingCoeff=0.6007;MQ=64.42;MQ0=15;MQRankSum=-4.246;QD=15.98;ReadPosRankSum=0.685;VQSLOD=1.8159;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:57.44:0,57,2796	1/1:5,6:11:10.26:340,10,0	0/0:40,0:21:60.16:0,60,2547	0/0:39,0:23:59.79:0,60,2596	0/0:12,0:12:31.35:0,31,1278	0/0:27,0:27:17.15:0,17,2734	0/0:16,0:16:40.37:0,40,1950	0/0:18,0:17:38.35:0,38,1525	0/0:15,0:15:34.36:0,34,1691	0/0:18,0:17:46.83:0,47,2329	0/0:13,0:12:36.12:0,36,1778	0/0:17,0:17:27.07:0,27,1206	0/0:19,0:19:41.16:0,41,1578	0/0:18,0:18:26.30:0,26,827	0/0:14,0:14:42.14:0,42,1965	0/0:21,0:20:51.18:0,51,2339	0/1:17,6:22:61.98:302,0,62	0/0:16,0:16:42.14:0,42,1915	0/0:17,0:16:41.12:0,41,2096	0/0:12,0:12:34.36:0,34,1531	0/0:31,0:30:64.46:0,64,3161	0/0:18,0:18:48.16:0,48,2048	0/0:28,0:28:54.66:0,55,2416	0/0:25,0:25:50.91:0,51,2456	0/0:19,0:18:42.14:0,42,2102	0/0:18,0:18:38.98:0,39,1912	0/0:16,0:16:33.11:0,33,1535	0/0:14,0:14:39.13:0,39,1620
chr10	44511161	.	TG	T	401.15	PASS	AB=0.706;AC=2;AF=0.036;AN=56;BaseQRankSum=6.779;DP=647;FS=6.765;HRun=2;HaplotypeScore=77.0688;InbreedingCoeff=-0.0371;MQ=88.56;MQ0=0;MQRankSum=-6.460;QD=8.54;ReadPosRankSum=1.636;VQSLOD=1.0492;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:42:99:0,129,1931	0/1:6,6:12:99:199,0,192	0/0:23,0:23:63.21:0,63,915	0/0:26,0:25:65.95:0,66,842	0/0:23,0:23:69.21:0,69,993	0/0:23,0:23:69.23:0,69,1034	0/0:24,0:24:72.23:0,72,1060	0/0:27,0:27:75.25:0,75,1105	0/0:19,0:19:57.18:0,57,834	0/0:20,0:20:54.16:0,54,770	0/0:18,0:18:54.17:0,54,783	0/0:23,0:23:69.18:0,69,985	0/0:19,0:19:54.18:0,54,809	0/0:16,0:16:48.13:0,48,669	0/0:23,0:23:69.23:0,69,1031	0/0:26,0:26:75.24:0,75,1105	0/1:23,12:35:99:291,0,891	0/0:21,0:21:63.18:0,63,902	0/0:13,0:13:39.12:0,39,565	0/0:18,0:18:54.17:0,54,778	0/0:23,0:23:69.22:0,69,1014	0/0:22,0:22:66.21:0,66,970	0/0:25,0:25:69.23:0,69,1031	0/0:36,0:36:99:0,99,1458	0/0:25,0:25:75.25:0,75,1121	0/0:22,0:22:66.22:0,66,989	0/0:32,0:31:90.29:0,90,1326	0/0:10,0:10:30.10:0,30,449
chr10	44511436	.	C	CA	1087.91	PASS	AB=0.711;AC=2;AF=0.036;AN=56;BaseQRankSum=-8.449;DP=730;FS=1.403;HRun=1;HaplotypeScore=81.1551;InbreedingCoeff=-0.0370;MQ=83.04;MQ0=0;MQRankSum=-1.656;QD=11.57;ReadPosRankSum=0.569;VQSLOD=1.9377;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,141,1829	0/1:10,7:17:99:225,0,271	0/0:25,0:25:62.31:0,62,778	0/0:22,0:22:63.14:0,63,781	0/0:22,0:22:60.19:0,60,779	0/0:15,0:15:45.15:0,45,584	0/0:29,0:29:84.27:0,84,1090	0/0:32,0:32:87.25:0,87,1091	0/0:23,0:23:69.21:0,69,881	0/0:18,0:18:54.18:0,54,699	0/0:22,0:22:66.19:0,66,840	0/0:25,0:25:75.24:0,75,974	0/0:24,0:24:72.22:0,72,919	0/0:30,0:30:84.27:0,84,1090	0/0:25,0:25:72.21:0,72,908	0/0:18,0:18:54.17:0,54,688	0/1:46,31:76:99:952,0,1553	0/0:31,0:31:87.23:0,87,1095	0/0:17,0:17:51.16:0,51,656	0/0:24,0:24:69.19:0,69,851	0/0:44,0:44:99:0,126,1618	0/0:22,0:22:66.17:0,66,815	0/0:20,0:20:57.17:0,57,721	0/0:24,0:24:72.22:0,72,920	0/0:15,0:15:42.12:0,42,531	0/0:24,0:24:72.23:0,72,934	0/0:22,0:22:66.21:0,66,854	0/0:15,0:15:45.14:0,45,571
chr10	44512069	.	AACC	A	1744.37	PASS	AB=0.599;AC=2;AF=0.038;AN=52;BaseQRankSum=6.543;DP=379;FS=13.599;HRun=0;HaplotypeScore=84.2985;InbreedingCoeff=-0.0400;MQ=82.96;MQ0=1;MQRankSum=-2.425;QD=24.92;ReadPosRankSum=7.060;VQSLOD=1.8441;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:31.41:0,31,352	0/1:6,12:18:21.38:670,0,21	0/0:30,0:26:49.70:0,50,730	0/0:19,0:16:26.36:0,26,315	0/0:8,0:8:23.94:0,24,335	0/0:13,0:13:29.23:0,29,387	0/0:21,0:21:54:0,54,804	0/0:20,0:20:57.07:0,57,530	0/0:11,0:11:27.03:0,27,436	0/0:19,0:19:45.07:0,45,476	./.	0/0:14,0:14:33.01:0,33,442	0/0:9,0:9:27.01:0,27,356	0/0:11,0:11:29.97:0,30,320	0/0:14,0:14:39.07:0,39,501	0/0:9,0:9:27.01:0,27,335	0/1:17,35:52:99:1163,0,208	0/0:17,0:17:50.98:0,51,520	0/0:6,0:6:18.01:0,18,243	0/0:4,0:4:9.01:0,9,112	0/0:7,0:7:15.03:0,15,239	0/0:6,0:6:8.72:0,9,101	./.	0/0:16,0:16:38.96:0,39,464	0/0:12,0:12:32.99:0,33,332	0/0:9,0:9:23.96:0,24,264	0/0:8,0:7:21.02:0,21,329	0/0:10,0:10:26.96:0,27,306
chr10	44512083	.	C	CA	1358.80	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=2.010;DP=385;FS=28.615;HRun=1;HaplotypeScore=92.4571;InbreedingCoeff=0.8393;MQ=77.59;MQ0=1;MQRankSum=-0.829;QD=11.61;ReadPosRankSum=-2.896;VQSLOD=0.0184;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:18:23.95:0,24,209	0/0:17,0:17:32.89:0,33,280	0/0:18,0:17:17.40:0,17,280	0/0:17,0:14:19.82:0,20,166	0/0:11,0:11:8.99:0,9,73	0/0:11,0:11:5.95:0,6,57	0/0:20,0:20:20.97:0,21,221	0/0:19,0:19:38.95:0,39,371	0/0:11,0:11:17.95:0,18,165	1/1:17,0:17:43.96:410,44,0	1/1:3,0:3:9:78,9,0	1/1:5,11:16:5:26,5,0	1/1:5,0:5:9.55:54,10,0	1/1:12,0:12:27.01:250,27,0	1/1:10,0:10:22.78:125,23,0	1/1:7,0:7:13.01:113,13,0	0/0:47,0:47:39.67:0,40,488	1/1:13,0:13:25.44:187,25,0	0/0:14,0:14:26.87:0,27,227	0/0:7,0:7:5.96:0,6,50	0/0:14,0:14:26.92:0,27,227	1/1:0,5:5:6.48:67,6,0	1/1:2,0:2:6:52,6,0	1/1:1,16:17:1.82:5,2,0	1/1:10,0:10:23.96:201,24,0	0/0:16,0:15:13.37:0,13,129	0/0:17,0:16:25.05:0,25,180	0/0:9,0:10:2.92:0,3,17
chr10	44512234	.	AGACC	A	234.17	PASS	AB=0.842;AC=2;AF=0.036;AN=56;BaseQRankSum=4.858;DP=563;FS=1.322;HRun=0;HaplotypeScore=101.1381;InbreedingCoeff=-0.0379;MQ=89.28;MQ0=0;MQRankSum=-5.022;QD=4.26;ReadPosRankSum=0.062;VQSLOD=1.9111;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,99,2602	0/1:13,6:19:99:229,0,898	0/0:25,0:25:63.22:0,63,1541	0/0:25,0:25:60.18:0,60,1432	0/0:8,0:8:24.08:0,24,600	0/0:10,0:10:27.09:0,27,683	0/0:21,0:21:57.20:0,57,1482	0/0:32,0:32:75.26:0,75,1957	0/0:13,0:13:36.12:0,36,923	0/0:12,0:12:36.12:0,36,960	0/0:10,0:10:30.10:0,30,800	0/0:23,0:23:66.23:0,66,1715	0/0:22,0:22:63.22:0,63,1677	0/0:17,0:17:51.15:0,51,1173	0/0:15,0:15:42.14:0,42,1107	0/0:16,0:16:48.15:0,48,1204	0/1:33,3:36:94.48:94,0,2061	0/0:36,0:36:99:0,105,2710	0/0:19,0:19:51.17:0,51,1327	0/0:18,0:18:54.17:0,54,1338	0/0:43,0:43:99:0,120,3120	0/0:6,0:6:18.06:0,18,444	0/0:9,0:9:24.08:0,24,638	0/0:43,0:42:99:0,120,3163	0/0:13,0:13:33.11:0,33,842	0/0:17,0:17:51.17:0,51,1322	0/0:14,0:14:42.14:0,42,982	0/0:6,0:6:18.06:0,18,474
chr10	44512338	.	G	GTTTGTTT	3015.49	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.866;DP=557;FS=11.109;HRun=0;HaplotypeScore=133.1615;InbreedingCoeff=0.9947;MQ=73.35;MQ0=0;MQRankSum=-8.076;QD=57.99;ReadPosRankSum=-1.777;VQSLOD=2.6199;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:87.21:0,87,1912	1/1:4,11:15:30.06:976,30,0	0/0:30,0:27:54.11:0,54,1013	0/0:19,0:18:22.19:0,22,608	0/0:15,0:15:42.09:0,42,911	0/0:19,0:19:42.14:0,42,959	0/0:18,0:18:36.12:0,36,841	0/0:32,0:32:72.22:0,72,1526	0/0:16,0:16:39.13:0,39,905	0/0:18,0:18:48.16:0,48,1068	0/0:10,0:10:27.07:0,27,567	0/0:21,0:21:51.17:0,51,1167	0/0:20,0:20:57.20:0,57,1339	0/0:14,0:14:27.07:0,27,580	0/0:18,0:18:45.13:0,45,987	0/0:11,0:11:24.08:0,24,544	1/1:29,8:37:68.51:2161,69,0	0/0:24,0:24:60.19:0,60,1301	0/0:23,0:23:51.15:0,51,1084	0/0:19,0:19:42.13:0,42,913	0/0:24,0:24:57.13:0,57,1128	0/0:12,0:12:27.09:0,27,616	0/0:10,0:10:30.09:0,30,653	0/0:25,0:25:57.16:0,57,1220	0/0:24,0:24:57.18:0,57,1290	0/0:21,0:21:54.18:0,54,1260	0/0:15,0:15:33.09:0,33,723	0/0:14,0:14:30.08:0,30,639
chr10	44512397	.	TC	T	533.98	PASS	AB=0.749;AC=2;AF=0.036;AN=56;BaseQRankSum=7.926;DP=516;FS=0.000;HRun=1;HaplotypeScore=56.5351;InbreedingCoeff=-0.0467;MQ=70.16;MQ0=0;MQRankSum=-4.191;QD=9.89;ReadPosRankSum=1.510;VQSLOD=1.2950;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:78.24:0,78,1093	0/1:11,4:15:99:121,0,392	0/0:16,0:16:29.95:0,30,476	0/0:9,0:8:24.07:0,24,303	0/0:17,0:17:48.14:0,48,664	0/0:17,0:17:51.14:0,51,691	0/0:18,0:18:54.17:0,54,749	0/0:28,0:28:84.21:0,84,1099	0/0:15,0:15:45.12:0,45,605	0/0:15,0:15:45.14:0,45,629	0/0:11,0:11:33.11:0,33,472	0/0:20,0:20:60.16:0,60,795	0/0:22,0:22:66.18:0,66,902	0/0:13,0:13:39.13:0,39,557	0/0:16,0:16:48.16:0,48,684	0/0:15,0:15:45.14:0,45,625	0/1:23,16:39:99:502,0,805	0/0:22,0:22:66.17:0,66,901	0/0:23,0:23:69.23:0,69,988	0/0:20,0:20:60.16:0,60,804	0/0:17,0:17:51.16:0,51,710	0/0:9,0:9:27.09:0,27,385	0/0:14,0:14:42.09:0,42,574	0/0:13,1:14:0.20:0,0,441	0/0:25,0:25:75.23:0,75,1036	0/0:29,0:29:87.29:0,87,1244	0/0:19,0:19:54.18:0,54,769	0/0:12,0:12:36.12:0,36,514
chr10	44512687	.	T	TC	696.78	PASS	AB=0.733;AC=2;AF=0.036;AN=56;BaseQRankSum=8.200;DP=730;FS=2.571;HRun=6;HaplotypeScore=76.6037;InbreedingCoeff=-0.0370;MQ=84.51;MQ0=0;MQRankSum=-1.321;QD=9.29;ReadPosRankSum=0.065;VQSLOD=0.9147;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:58:99:0,147,1478	0/1:15,7:22:99:169,0,340	0/0:32,0:31:75.11:0,75,741	0/0:24,0:24:51.06:0,51,494	0/0:29,0:29:84.17:0,84,850	0/0:21,0:21:51.10:0,51,515	0/0:24,0:24:60.11:0,60,605	0/0:29,0:29:69.11:0,69,680	0/0:20,0:20:57.12:0,57,575	0/0:19,0:19:51.11:0,51,517	0/0:23,0:23:66.08:0,66,659	0/0:23,0:23:51.10:0,51,514	0/0:24,0:24:66.13:0,66,667	0/0:27,0:27:75.16:0,75,758	0/0:21,0:21:57.13:0,57,582	0/0:19,0:19:48.10:0,48,484	0/1:31,22:52:99:616,0,657	0/0:25,0:25:69.14:0,69,696	0/0:19,0:19:48.10:0,48,489	0/0:28,0:28:84.19:0,84,857	0/0:27,0:27:81.14:0,81,807	0/0:17,0:17:45.10:0,45,459	0/0:23,0:24:68.19:0,68,679	0/0:34,0:34:84.17:0,84,850	0/0:20,0:20:51.11:0,51,520	0/0:25,0:25:72.16:0,72,730	0/0:30,0:30:87.18:0,87,881	0/0:13,0:13:39.09:0,39,398
chr10	44512828	.	CTGCA	C	1556.96	PASS	AB=0.697;AC=2;AF=0.036;AN=56;BaseQRankSum=7.919;DP=752;FS=0.000;HRun=0;HaplotypeScore=120.3251;InbreedingCoeff=-0.0370;MQ=79.37;MQ0=0;MQRankSum=-3.388;QD=20.49;ReadPosRankSum=1.327;VQSLOD=3.4857;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,135,3402	0/1:15,9:24:99:454,0,1080	0/0:22,0:22:60.12:0,60,1308	0/0:25,0:25:65.85:0,66,1441	0/0:25,0:25:72.25:0,72,1947	0/0:15,0:15:45.15:0,45,1233	0/0:26,0:26:72.25:0,72,1929	0/0:24,0:24:66.21:0,66,1670	0/0:29,0:29:87.30:0,87,2380	0/0:43,0:43:99:0,129,3421	0/0:23,0:23:69.24:0,69,1857	0/0:34,0:34:99:0,99,2615	0/0:32,0:32:93.32:0,93,2490	0/0:23,0:23:66.21:0,66,1751	0/0:41,0:41:99:0,123,3247	0/0:24,0:24:69.24:0,69,1833	0/1:26,26:52:99:1192,0,1868	0/0:23,0:23:63.22:0,63,1705	0/0:19,0:19:54.19:0,54,1441	0/0:22,0:22:63.22:0,63,1714	0/0:29,0:29:87.30:0,87,2349	0/0:21,0:21:57.20:0,57,1558	0/0:19,0:19:57.20:0,57,1535	0/0:26,0:26:75.26:0,75,1989	0/0:16,0:16:48.16:0,48,1302	0/0:31,0:31:90.31:0,90,2443	0/0:25,0:24:75.26:0,75,2032	0/0:12,0:12:33.11:0,33,904
chr10	44513419	.	TC	T	552.51	PASS	AB=0.567;AC=3;AF=0.054;AN=56;BaseQRankSum=5.913;DP=592;FS=8.248;HRun=2;HaplotypeScore=59.4119;InbreedingCoeff=0.6402;MQ=91.02;MQ0=0;MQRankSum=-3.446;QD=22.10;ReadPosRankSum=1.827;VQSLOD=2.9935;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:78.26:0,78,1169	1/1:1,7:8:18.06:234,18,0	0/0:24,0:24:67.11:0,67,988	0/0:23,1:23:69.17:0,69,966	0/0:34,0:34:99:0,102,1487	0/0:32,0:32:93.31:0,93,1391	0/0:13,0:13:39.11:0,39,564	0/0:38,0:38:99:0,111,1627	0/0:17,0:17:51.17:0,51,762	0/0:26,0:26:78.26:0,78,1166	0/0:18,0:18:54.18:0,54,809	0/0:14,0:14:42.14:0,42,623	0/0:21,0:21:60.20:0,60,899	0/0:11,0:11:33.11:0,33,495	0/0:20,0:20:57.19:0,57,854	0/0:12,0:12:36.12:0,36,538	0/1:4,13:17:89.45:422,0,89	0/0:15,0:15:36.12:0,36,539	0/0:16,0:16:42.14:0,42,630	0/0:25,0:25:75.25:0,75,1122	0/0:31,0:31:93.30:0,93,1374	0/0:20,0:20:60.20:0,60,898	0/0:20,0:20:57.17:0,57,832	0/0:11,0:11:33.11:0,33,495	0/0:22,0:22:66.22:0,66,989	0/0:25,0:25:75.23:0,75,1067	0/0:31,0:29:93.32:0,93,1393	0/0:21,0:21:63.21:0,63,944
chr10	44513540	.	A	AT	224.45	PASS	AB=0.679;AC=1;AF=0.018;AN=56;BaseQRankSum=5.037;DP=604;FS=3.011;HRun=2;HaplotypeScore=70.7392;InbreedingCoeff=-0.0183;MQ=83.68;MQ0=0;MQRankSum=-4.297;QD=11.81;ReadPosRankSum=0.273;VQSLOD=2.0602;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:63.20:0,63,781	0/1:10,9:19:99:299,0,181	0/0:18,0:18:48.13:0,48,573	0/0:19,0:19:44.96:0,45,526	0/0:24,0:24:72.23:0,72,892	0/0:26,0:26:72.23:0,72,892	0/0:19,0:19:57.11:0,57,687	0/0:36,0:36:97.69:0,98,1140	0/0:21,0:21:60.18:0,60,731	0/0:18,0:18:51.16:0,51,632	0/0:26,0:26:75.23:0,75,921	0/0:24,0:24:69.20:0,69,841	0/0:23,0:23:63.20:0,63,781	0/0:16,0:16:48.15:0,48,595	0/0:12,0:12:36.10:0,36,433	0/0:21,0:21:60.16:0,60,719	0/0:20,0:20:60.15:0,60,715	0/0:12,0:12:36.11:0,36,446	0/0:22,0:22:66.21:0,66,818	0/0:26,0:26:72.21:0,72,880	0/0:31,0:31:90.28:0,90,1116	0/0:24,0:24:69.22:0,69,856	0/0:27,0:27:81.25:0,81,1004	0/0:10,0:10:24.07:0,24,298	0/0:18,0:18:54.17:0,54,670	0/0:24,0:24:66.21:0,66,818	0/0:31,0:31:87.26:0,87,1065	0/0:14,0:14:42.09:0,42,492
chr10	44513589	.	T	TCCTAACCTTTTC	936.53	PASS	AB=0.870;AC=2;AF=0.036;AN=56;BaseQRankSum=4.779;DP=590;FS=8.231;HRun=0;HaplotypeScore=200.9872;InbreedingCoeff=-0.0371;MQ=68.94;MQ0=0;MQRankSum=-3.551;QD=23.41;ReadPosRankSum=-1.005;VQSLOD=1.9185;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:78.20:0,78,2750	0/1:13,6:20:99:933,0,1206	0/0:19,0:17:35.30:0,35,1290	0/0:12,0:12:30:0,30,818	0/0:30,0:30:90.30:0,90,3175	0/0:22,0:22:63.18:0,63,2147	0/0:20,0:20:57.17:0,57,1947	0/0:29,0:29:84.27:0,84,2737	0/0:24,0:24:72.23:0,72,2649	0/0:25,0:25:72.25:0,72,2701	0/0:20,0:20:60.21:0,60,2327	0/0:13,0:13:39.13:0,39,1458	0/0:33,0:33:99:0,99,3483	0/0:13,0:13:39.12:0,39,1395	0/0:20,0:20:60.21:0,60,2348	0/0:15,0:15:45.15:0,45,1677	0/1:20,0:20:92.75:93,0,1971	0/0:16,0:17:51.11:0,51,1789	0/0:24,0:24:72.24:0,72,2682	0/0:23,0:23:69.24:0,69,2639	0/0:24,0:24:68.90:0,69,2566	0/0:17,0:17:48.16:0,48,1833	0/0:25,0:25:75.26:0,75,2870	0/0:9,0:9:27.09:0,27,1019	0/0:22,0:21:66.19:0,66,2416	0/0:22,0:22:66.23:0,66,2453	0/0:35,0:35:99:0,102,3857	0/0:10,0:10:30.10:0,30,1006
chr10	44513763	.	TA	T	747.33	PASS	AB=0.701;AC=2;AF=0.036;AN=56;BaseQRankSum=7.924;DP=695;FS=1.400;HRun=1;HaplotypeScore=159.1339;InbreedingCoeff=-0.0373;MQ=74.70;MQ0=0;MQRankSum=-4.277;QD=10.83;ReadPosRankSum=-2.294;VQSLOD=1.0377;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:77.63:0,78,862	0/1:8,7:15:99:214,0,232	0/0:12,1:12:18.83:0,19,403	0/0:25,0:24:47.09:0,47,759	0/0:35,0:35:92.82:0,93,1016	0/0:15,0:15:45.14:0,45,546	0/0:19,0:19:56.90:0,57,686	0/0:26,0:26:78.22:0,78,1071	0/0:28,0:28:84.22:0,84,990	0/0:32,0:32:94.80:0,95,1302	0/0:24,0:24:69.06:0,69,805	0/0:19,0:19:57.15:0,57,686	0/0:31,0:31:90.21:0,90,1063	0/0:19,0:19:36.86:0,37,546	0/0:25,0:25:71.59:0,72,872	0/0:19,0:19:57.18:0,57,730	0/1:33,21:54:99:622,0,894	0/0:26,0:26:75.17:0,75,871	0/0:23,0:23:45.14:0,45,878	0/0:32,0:32:93.24:0,93,1102	0/0:18,0:18:48.13:0,48,588	0/0:29,0:29:76.26:0,76,958	0/0:29,0:29:76.84:0,77,809	0/0:10,0:10:30.08:0,30,358	0/0:18,0:18:54.17:0,54,681	0/0:29,0:29:86.30:0,86,1150	0/0:30,0:29:81.13:0,81,916	0/0:25,0:25:72.69:0,73,857
chr10	44514041	.	CTGCTTTTGGCT	C	636.61	PASS	AB=0.754;AC=2;AF=0.036;AN=56;BaseQRankSum=5.101;DP=677;FS=1.260;HRun=0;HaplotypeScore=210.2028;InbreedingCoeff=-0.0371;MQ=58.25;MQ0=5;MQRankSum=-5.048;QD=10.44;ReadPosRankSum=1.471;VQSLOD=2.5679;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:42:99:0,120,5413	0/1:9,6:15:99:582,0,1053	0/0:21,0:13:39.13:0,39,1866	0/0:19,0:14:42.14:0,42,1776	0/0:27,0:27:81.28:0,81,3881	0/0:27,0:27:75.26:0,75,3364	0/0:37,0:37:99:0,105,5230	0/0:24,0:24:69.22:0,69,3252	0/0:15,0:15:45.14:0,45,2171	0/0:22,0:22:66.23:0,66,3108	0/0:20,0:20:57.20:0,57,2860	0/0:26,0:26:72.25:0,72,3313	0/0:15,0:15:45.14:0,45,2198	0/0:19,0:19:57.19:0,57,2749	0/0:17,0:17:48.15:0,48,2335	0/0:13,0:13:36.12:0,36,1834	0/1:34,12:46:99:144,0,3957	0/0:26,0:26:75.26:0,75,4044	0/0:26,0:24:63.22:0,63,2764	0/0:28,0:28:78.27:0,78,3424	0/0:42,0:42:99:0,114,5629	0/0:19,0:19:54.19:0,54,2577	0/0:22,0:22:66.23:0,66,3013	0/0:24,0:24:66.23:0,66,3500	0/0:16,0:16:48.16:0,48,2082	0/0:30,0:30:84.28:0,84,3478	0/0:27,0:27:78.25:0,78,4118	0/0:11,0:11:33.11:0,33,1804
chr10	44514270	.	TC	T	822.55	PASS	AB=0.636;AC=2;AF=0.036;AN=56;BaseQRankSum=9.105;DP=674;FS=5.828;HRun=4;HaplotypeScore=77.0185;InbreedingCoeff=-0.0371;MQ=70.86;MQ0=1;MQRankSum=-1.786;QD=12.46;ReadPosRankSum=0.743;VQSLOD=1.6508;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,114,1551	0/1:7,9:16:99:248,0,171	0/0:28,0:28:78.26:0,78,1090	0/0:19,0:19:54.18:0,54,740	0/0:26,0:26:78.19:0,78,1022	0/0:22,0:22:66.21:0,66,906	0/0:27,0:27:72.24:0,72,1004	0/0:26,0:26:78.25:0,78,1075	0/0:23,0:23:69.23:0,69,966	0/0:16,0:16:48.16:0,48,669	0/0:16,0:16:45.15:0,45,627	0/0:27,0:27:78.24:0,78,1059	0/0:20,0:20:57.19:0,57,797	0/0:24,0:24:72.24:0,72,1008	0/0:30,0:30:87.29:0,87,1217	0/0:27,0:27:78.23:0,78,1055	0/1:21,29:50:99:663,0,631	0/0:30,0:30:90.28:0,90,1233	0/0:22,0:22:63.20:0,63,865	0/0:20,0:20:60.12:0,60,765	0/0:18,0:17:51.17:0,51,707	0/0:25,0:25:75.24:0,75,1033	0/0:13,0:13:36.12:0,36,503	0/0:28,0:28:81.25:0,81,1115	0/0:14,0:14:33.11:0,33,462	0/0:23,0:23:66.21:0,66,904	0/0:32,0:32:96.32:0,96,1340	0/0:13,0:13:39.13:0,39,546
chr10	44514539	.	C	CAG	1267.37	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.981;DP=666;FS=7.518;HRun=0;HaplotypeScore=183.7648;InbreedingCoeff=0.9934;MQ=80.05;MQ0=0;MQRankSum=-7.394;QD=26.97;ReadPosRankSum=-0.360;VQSLOD=4.2135;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,105,1397	1/1:3,10:13:33.10:547,33,0	0/0:15,0:15:35.36:0,35,468	0/0:23,0:23:48.16:0,48,634	0/0:27,0:27:69.23:0,69,927	0/0:19,0:19:48.16:0,48,648	0/0:28,0:28:75.21:0,75,979	0/0:24,0:24:66.14:0,66,852	0/0:17,0:17:51.17:0,51,688	0/0:32,0:32:84.27:0,84,1121	0/0:22,0:22:45.05:0,45,568	0/0:30,0:30:72.24:0,72,971	0/0:27,0:27:78.24:0,78,1026	0/0:30,0:30:87.29:0,87,1174	0/0:26,0:26:66.21:0,66,877	0/0:15,0:15:42.14:0,42,568	1/1:16,18:34:50.54:842,51,0	0/0:20,0:20:51.11:0,51,650	0/0:19,0:19:51.13:0,51,657	0/0:22,0:22:54.18:0,54,729	0/0:44,0:44:99:0,105,1388	0/0:19,0:19:54.16:0,54,712	0/0:10,0:10:21.07:0,21,283	0/0:35,0:34:72.24:0,72,971	0/0:13,0:13:33.11:0,33,442	0/0:24,0:24:69.21:0,69,902	0/0:27,0:27:57.19:0,57,764	0/0:7,0:7:18.06:0,18,243
chr10	44514631	.	T	TGAGGA	713.34	PASS	AB=0.799;AC=2;AF=0.036;AN=56;BaseQRankSum=4.703;DP=655;FS=6.820;HRun=0;HaplotypeScore=205.6219;InbreedingCoeff=-0.0392;MQ=89.01;MQ0=0;MQRankSum=-4.539;QD=16.59;ReadPosRankSum=0.931;VQSLOD=2.5892;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:64,0:64:99:0,187,4165	0/1:10,5:15:99:414,0,587	0/0:26,0:26:72.15:0,72,1420	0/0:29,0:29:81.75:0,82,1631	0/0:15,0:15:39.13:0,39,908	0/0:14,0:14:42.14:0,42,957	0/0:36,0:36:99:0,105,2317	0/0:29,0:29:81.26:0,81,1802	0/0:20,0:20:54.17:0,54,1198	0/0:25,0:25:72.25:0,72,1653	0/0:16,0:16:45.15:0,45,1001	0/0:21,0:21:63.22:0,63,1405	0/0:22,0:22:60.19:0,60,1326	0/0:19,0:19:51.18:0,51,1188	0/0:25,0:25:75.24:0,75,1703	0/0:25,0:25:69.22:0,69,1544	0/1:23,5:28:99:388,0,1122	0/0:17,0:17:51.13:0,51,1126	0/0:23,0:23:69.23:0,69,1553	0/0:22,0:22:56.27:0,56,1232	0/0:26,0:26:78.21:0,78,1613	0/0:17,0:17:48.16:0,48,1118	0/0:16,0:16:42.14:0,42,968	0/0:34,0:33:99:0,99,2233	0/0:16,0:16:45.15:0,45,1036	0/0:20,0:20:60.21:0,60,1382	0/0:31,0:31:87.30:0,87,1993	0/0:4,0:4:9.03:0,9,210
chr10	44514697	.	C	CA	3083.57	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=1.741;DP=720;FS=5.970;HRun=0;HaplotypeScore=80.4319;InbreedingCoeff=0.9989;MQ=81.22;MQ0=0;MQRankSum=-5.290;QD=40.57;ReadPosRankSum=-0.417;VQSLOD=3.8647;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:57:99:0,169,2337	1/1:1,27:28:75.25:1161,75,0	0/0:23,0:23:69.17:0,69,847	0/0:19,0:19:48.10:0,48,612	0/0:25,0:25:72.24:0,72,1005	0/0:18,0:18:48.15:0,48,654	0/0:32,0:32:96.32:0,96,1331	0/0:30,0:30:90.26:0,90,1228	0/0:21,0:21:63.21:0,63,881	0/0:29,0:29:84.28:0,84,1172	0/0:15,0:15:45.13:0,45,596	0/0:29,0:29:84.28:0,84,1162	0/0:25,0:25:75.24:0,75,1033	0/0:24,0:24:72.24:0,72,1002	0/0:21,0:21:63.21:0,63,881	0/0:31,0:31:93.31:0,93,1299	1/1:1,47:47:99:2045,129,0	0/0:19,0:19:57.19:0,57,793	0/0:27,0:27:81.25:0,81,1114	0/0:19,0:18:54.17:0,54,734	0/0:33,0:33:90.29:0,90,1235	0/0:14,0:14:36.12:0,36,496	0/0:16,0:16:48.16:0,48,671	0/0:40,0:40:99:0,120,1678	0/0:20,0:20:60.17:0,60,792	0/0:21,0:21:63.20:0,63,862	0/0:27,0:27:81.21:0,81,1047	0/0:9,0:8:24.08:0,24,335
chr10	44514904	.	A	ATTTAT	1136.86	PASS	AB=0.759;AC=2;AF=0.036;AN=56;BaseQRankSum=-1.424;DP=502;FS=3.284;HRun=0;HaplotypeScore=97.8384;InbreedingCoeff=-0.0415;MQ=78.58;MQ0=1;MQRankSum=-3.578;QD=18.95;ReadPosRankSum=1.673;VQSLOD=3.1884;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:66.18:0,66,1243	0/1:8,3:11:99:165,0,122	0/0:25,0:22:34.28:0,34,643	0/0:23,0:21:36.96:0,37,655	0/0:14,0:14:39.13:0,39,821	0/0:18,0:18:54.16:0,54,1061	0/0:18,0:18:54.16:0,54,1017	0/0:34,0:33:96.29:0,96,1794	0/0:18,0:18:51.14:0,51,895	0/0:25,0:25:72.21:0,72,1253	0/0:15,0:15:36.09:0,36,670	0/0:7,0:7:21.07:0,21,447	0/0:18,0:18:48.14:0,48,903	0/0:9,0:9:27.07:0,27,499	0/0:20,0:20:60.16:0,60,1109	0/0:15,0:15:36.08:0,36,645	0/1:31,18:49:99:1061,0,1478	0/0:16,0:16:48.12:0,48,959	0/0:21,0:21:60.18:0,60,1112	0/0:23,0:23:63.21:0,63,1284	0/0:12,0:12:33.10:0,33,584	0/0:14,0:14:36.10:0,36,713	0/0:9,0:9:24.07:0,24,476	0/0:10,0:10:27.08:0,27,537	0/0:8,0:8:18.06:0,18,348	0/0:29,0:29:81.25:0,81,1524	0/0:17,0:17:48.15:0,48,933	0/0:2,0:2:6.02:0,6,128
chr10	44515136	.	TGGAA	T	236.98	PASS	AC=2;AF=0.037;AN=54;BaseQRankSum=1.450;DP=501;FS=5.381;HRun=0;HaplotypeScore=103.5228;InbreedingCoeff=0.9209;MQ=71.32;MQ0=1;MQRankSum=-0.375;QD=19.75;ReadPosRankSum=-2.535;VQSLOD=2.3232;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,123,2841	0/0:14,0:13:21.60:0,22,166	0/0:22,0:17:23.70:0,24,338	0/0:14,0:12:12.03:0,12,181	0/0:19,0:19:48.16:0,48,1041	0/0:13,0:13:24.08:0,24,588	0/0:25,0:25:39.12:0,39,825	1/1:3,9:12:24.05:330,24,0	0/0:20,0:20:42.13:0,42,892	0/0:18,0:18:36.12:0,36,823	0/0:11,0:11:27.09:0,27,623	0/0:13,0:13:39.08:0,39,843	0/0:15,0:15:42.14:0,42,967	0/0:21,0:21:53.88:0,54,1115	0/0:18,0:18:30.09:0,30,630	0/0:19,0:19:42.14:0,42,965	0/0:36,0:34:33.91:0,34,415	0/0:26,0:25:51.17:0,51,1193	0/0:14,0:13:18.06:0,18,350	0/0:11,0:11:30.09:0,30,578	0/0:21,0:21:30.08:0,30,670	0/0:9,0:9:12.04:0,12,268	0/0:12,0:12:30.10:0,30,604	0/0:28,0:28:54.14:0,54,1108	0/0:10,0:10:24.08:0,24,559	0/0:16,0:16:39.13:0,39,929	0/0:11,0:11:33.11:0,33,708	./.
chr10	44515160	.	A	AG	1210.47	PASS	AB=1.000;AC=5;AF=0.093;AN=54;BaseQRankSum=6.231;DP=439;FS=4.533;HRun=1;HaplotypeScore=67.7965;InbreedingCoeff=0.7726;MQ=60.81;MQ0=7;MQRankSum=-7.281;QD=19.21;ReadPosRankSum=-0.126;VQSLOD=3.6983;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,120,1557	1/1:1,8:8:24.08:337,24,0	0/0:27,0:13:29.96:0,30,335	0/1:18,0:10:20.75:21,0,208	0/0:17,0:17:51.13:0,51,620	0/0:11,0:11:33.11:0,33,428	0/0:20,0:20:57.19:0,57,739	0/0:15,0:13:29.71:0,30,265	0/0:16,0:16:45.15:0,45,584	0/0:16,0:16:48.12:0,48,578	0/0:11,0:11:33.09:0,33,414	0/0:13,0:13:36.12:0,36,467	0/0:17,0:17:51.17:0,51,660	0/0:18,0:18:51.16:0,51,649	0/0:13,0:13:36.10:0,36,452	0/0:14,0:14:36.12:0,36,466	1/1:3,33:33:64.85:981,65,0	0/0:19,0:18:52.38:0,52,647	0/0:12,0:9:24.02:0,24,255	0/0:10,0:10:30.09:0,30,378	0/0:13,0:12:33.11:0,33,428	0/0:5,0:5:15.04:0,15,183	0/0:11,0:11:30.10:0,30,389	0/0:17,0:17:48.08:0,48,588	0/0:10,0:10:30.09:0,30,378	0/0:16,0:16:48.15:0,48,612	0/0:13,0:13:39.11:0,39,491	./.
chr10	44515167	.	A	AG	538.05	PASS	AB=0.647;AC=3;AF=0.054;AN=56;BaseQRankSum=7.531;DP=411;FS=5.553;HRun=1;HaplotypeScore=72.3418;InbreedingCoeff=0.5488;MQ=57.92;MQ0=6;MQRankSum=-6.699;QD=12.81;ReadPosRankSum=-1.065;VQSLOD=1.8644;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,117,1492	1/1:4,5:8:17.44:194,17,0	0/0:29,0:14:32.88:0,33,364	0/0:19,0:11:28.03:0,28,308	0/0:13,0:13:36.12:0,36,467	0/0:11,0:11:33.11:0,33,428	0/0:17,0:17:51.11:0,51,642	0/0:14,0:12:32.94:0,33,384	0/0:15,0:15:45.12:0,45,556	0/0:14,0:14:42.14:0,42,545	0/0:12,0:12:36.10:0,36,452	0/0:13,0:13:36.10:0,36,452	0/0:16,0:16:45.15:0,45,584	0/0:18,0:18:54.15:0,54,671	0/0:11,0:11:33.11:0,33,428	0/0:12,0:12:36.12:0,36,467	0/1:15,18:28:99:447,0,133	0/0:18,0:17:47.73:0,48,581	0/0:12,0:9:27.05:0,27,331	0/0:7,0:7:21.07:0,21,273	0/0:15,0:14:27.98:0,28,458	0/0:4,0:4:12.04:0,12,156	0/0:6,0:6:18.06:0,18,234	0/0:16,0:16:48.16:0,48,621	0/0:9,0:9:27.09:0,27,350	0/0:15,0:15:45.15:0,45,584	0/0:11,0:11:27.09:0,27,350	0/0:2,0:2:3.01:0,3,31
chr10	44515176	.	G	GA	170.10	PASS	AB=0.810;AC=2;AF=0.036;AN=56;BaseQRankSum=5.805;DP=391;FS=8.103;HRun=1;HaplotypeScore=74.3990;InbreedingCoeff=-0.0518;MQ=58.92;MQ0=6;MQRankSum=-3.774;QD=4.86;ReadPosRankSum=-1.782;VQSLOD=-0.6242;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,105,1360	0/1:5,1:5:33.19:33,0,84	0/0:37,0:17:47.40:0,47,548	0/0:23,0:13:24.16:0,24,345	0/0:10,0:10:30.10:0,30,389	0/0:11,0:11:30.10:0,30,389	0/0:16,0:16:48.16:0,48,619	0/0:17,0:15:36.10:0,36,449	0/0:14,0:14:42.14:0,42,544	0/0:14,0:14:42.13:0,42,534	0/0:10,0:10:30.10:0,30,389	0/0:11,0:11:30.10:0,30,387	0/0:16,0:16:48.16:0,48,622	0/0:17,0:17:51.15:0,51,647	0/0:9,0:9:25.90:0,26,316	0/0:12,0:12:36.12:0,36,467	0/1:19,9:26:99:225,0,393	0/0:16,0:15:44.36:0,44,550	0/0:10,0:7:21.07:0,21,269	0/0:5,0:5:15.05:0,15,194	0/0:11,0:12:1.30:0,1,352	0/0:4,0:4:12.04:0,12,156	0/0:8,0:8:18.04:0,18,220	0/0:16,0:16:42.14:0,42,543	0/0:7,0:7:21.07:0,21,272	0/0:13,0:13:39.12:0,39,493	0/0:10,0:10:27.07:0,27,333	0/0:3,0:3:6.02:0,6,78
chr10	44515177	.	AGAAAGG	A	339.25	PASS	AB=0.894;AC=3;AF=0.054;AN=56;BaseQRankSum=5.900;DP=383;FS=2.541;HRun=0;HaplotypeScore=104.8914;InbreedingCoeff=-0.0573;MQ=59.26;MQ0=4;MQRankSum=-3.773;QD=7.54;ReadPosRankSum=-1.240;VQSLOD=1.9479;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,105,3517	0/1:4,2:5:99:131,0,178	0/0:34,0:16:36.73:0,37,1017	0/0:23,0:13:29.28:0,29,910	0/0:10,0:10:30.10:0,30,1002	0/0:11,0:11:33.11:0,33,1164	0/0:16,0:16:48.16:0,48,1696	0/0:16,0:14:39.13:0,39,1133	0/0:14,0:14:42.14:0,42,1391	0/0:14,0:14:42.14:0,42,1475	0/0:10,0:10:30.10:0,30,961	0/0:11,0:11:30.10:0,30,982	0/0:16,0:16:48.16:0,48,1540	0/0:17,0:17:51.16:0,51,1660	0/0:8,0:8:24.08:0,24,870	0/0:12,0:12:36.12:0,36,1269	0/1:25,2:24:99:296,0,423	0/0:16,0:15:44.18:0,44,1416	0/0:8,0:7:21.07:0,21,617	0/0:5,0:5:15.05:0,15,492	0/1:12,0:12:6.14:6,0,928	0/0:4,0:4:12.04:0,12,372	0/0:8,0:8:24.07:0,24,717	0/0:15,0:15:42.14:0,42,1386	0/0:7,0:7:21.07:0,21,705	0/0:13,0:13:39.12:0,39,1306	0/0:9,0:9:27.08:0,27,737	0/0:4,0:4:9.03:0,9,212
chr10	44515248	.	A	AGG	263.12	PASS	AB=0.791;AC=2;AF=0.036;AN=56;BaseQRankSum=6.324;DP=411;FS=2.443;HRun=3;HaplotypeScore=68.0740;InbreedingCoeff=-0.0382;MQ=73.11;MQ0=3;MQRankSum=-4.775;QD=8.49;ReadPosRankSum=2.868;VQSLOD=0.7511;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:48.14:0,48,737	0/1:9,4:13:99:186,0,168	0/0:20,0:12:27.35:0,27,354	0/0:17,0:10:23.91:0,24,285	0/0:10,0:10:27.09:0,27,438	0/0:10,0:10:30.06:0,30,417	0/0:28,0:28:81.26:0,81,1296	0/0:15,0:15:45.15:0,45,714	0/0:13,0:13:39.09:0,39,607	0/0:21,0:20:57.19:0,57,928	0/0:11,0:11:27.09:0,27,440	0/0:23,0:23:42.64:0,43,886	0/0:14,0:14:39.13:0,39,624	0/0:22,0:22:66.23:0,66,1070	0/0:19,0:19:57.18:0,57,906	0/0:10,0:10:27.09:0,27,440	0/1:14,4:18:99:166,0,412	0/0:7,0:6:15.03:0,15,220	0/0:8,0:8:21.06:0,21,299	0/0:8,0:8:24.08:0,24,391	0/0:22,0:22:60.20:0,60,976	0/0:8,0:8:24.07:0,24,363	0/0:15,0:15:42.14:0,42,684	0/0:15,0:15:38.19:0,38,634	0/0:11,0:11:33.08:0,33,482	0/0:15,0:15:45.15:0,45,731	0/0:13,0:13:36.12:0,36,585	0/0:9,0:9:27.09:0,27,440
chr10	44515943	.	TTGG	T	613.24	PASS	AB=0.758;AC=2;AF=0.036;AN=56;BaseQRankSum=5.804;DP=514;FS=0.824;HRun=0;HaplotypeScore=96.9767;InbreedingCoeff=-0.0402;MQ=79.09;MQ0=1;MQRankSum=-5.602;QD=7.48;ReadPosRankSum=3.644;VQSLOD=2.7157;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:54.03:0,54,540	0/1:9,2:11:25.79:26,0,189	0/0:20,0:20:16.05:0,16,472	0/0:16,0:15:30.39:0,30,264	0/0:12,0:12:30.06:0,30,335	0/0:15,0:15:42.03:0,42,474	0/0:25,0:25:68.92:0,69,878	0/0:23,0:23:31.22:0,31,383	0/0:20,0:20:54.10:0,54,683	0/0:11,0:11:32.45:0,32,243	0/0:5,0:5:8.58:0,9,70	0/0:19,0:19:51.03:0,51,498	0/0:14,0:14:39:0,39,455	0/0:16,0:16:45.05:0,45,523	0/0:25,0:25:37.90:0,38,309	0/0:16,0:15:24.61:0,25,170	0/1:36,34:71:99:676,0,842	0/0:16,0:16:28.86:0,29,206	0/0:11,0:11:33.01:0,33,418	0/0:14,0:14:22.42:0,22,358	0/0:32,0:32:78.04:0,78,863	0/0:9,0:9:24.49:0,24,242	0/0:10,0:10:30.01:0,30,268	0/0:21,1:22:60.09:0,60,760	0/0:14,0:14:26.70:0,27,220	0/0:19,0:19:54.08:0,54,569	0/0:14,0:14:33.18:0,33,343	0/0:15,0:15:45.05:0,45,551
chr10	44516378	.	CTTTA	C	1303.54	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.788;DP=547;FS=11.416;HRun=0;HaplotypeScore=99.9788;InbreedingCoeff=0.9956;MQ=69.78;MQ0=11;MQRankSum=5.330;QD=39.50;ReadPosRankSum=-4.379;VQSLOD=1.8584;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:17:42.14:0,42,689	0/0:14,0:14:39.13:0,39,632	0/0:28,0:13:30.10:0,30,507	0/0:33,0:19:31.40:0,31,639	0/0:20,0:19:54.18:0,54,912	0/0:29,0:29:54.87:0,55,825	0/0:15,0:15:38.93:0,39,577	1/1:2,30:32:93.28:1398,93,0	0/0:13,0:13:36.12:0,36,573	0/0:23,0:23:41.37:0,41,918	0/0:15,0:15:42.58:0,43,692	0/0:20,0:20:60.16:0,60,1034	0/0:18,0:18:44.99:0,45,777	0/0:17,0:17:45.03:0,45,745	0/0:13,0:13:33.11:0,33,539	0/0:15,0:15:42.12:0,42,741	0/0:26,0:26:58.94:0,59,776	0/0:14,0:14:36.07:0,36,536	0/0:10,0:10:29.77:0,30,449	0/0:26,0:26:75.22:0,75,1204	0/0:22,0:22:51.17:0,51,881	0/0:16,0:16:45.14:0,45,776	0/0:10,0:10:30.10:0,30,516	0/0:20,0:19:37.33:0,37,659	0/0:10,0:10:25.33:0,25,438	0/0:27,0:27:74.27:0,74,1196	0/0:26,0:25:74.77:0,75,1340	0/0:16,0:16:45.15:0,45,746
chr10	44516436	.	C	CCCCT	656.71	PASS	AB=0.696;AC=2;AF=0.036;AN=56;BaseQRankSum=4.887;DP=565;FS=24.251;HRun=0;HaplotypeScore=102.6030;InbreedingCoeff=0.0499;MQ=56.27;MQ0=25;MQRankSum=-2.624;QD=23.45;ReadPosRankSum=-2.118;VQSLOD=1.1589;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:21:48.16:0,48,899	0/1:3,6:9:9.82:316,0,10	0/0:66,0:18:33.14:0,33,576	0/0:91,0:28:63.76:0,64,1102	0/0:17,0:17:48.15:0,48,909	0/0:18,0:17:42.61:0,43,736	0/0:6,0:6:18.06:0,18,342	0/0:25,0:23:57.08:0,57,999	0/0:13,0:13:33.10:0,33,615	0/0:20,0:19:60.17:0,60,1092	0/0:11,0:11:30.09:0,30,556	0/0:22,0:22:60.16:0,60,1110	0/0:16,0:16:45.14:0,45,831	0/0:10,0:10:26.32:0,26,528	0/0:19,0:19:54.15:0,54,1017	0/0:18,0:18:45.08:0,45,816	0/1:14,5:19:89.10:429,0,89	0/0:6,0:6:12.04:0,12,235	0/0:15,0:15:41.81:0,42,763	0/0:20,0:20:54.19:0,54,1060	0/0:14,0:14:36.12:0,36,701	0/0:16,0:16:42.14:0,42,772	0/0:14,0:13:36.12:0,36,697	0/0:18,0:17:43.03:0,43,826	0/0:12,0:12:36.11:0,36,675	0/0:13,0:12:33.11:0,33,646	0/0:20,0:19:54.19:0,54,1036	0/0:14,0:14:33.07:0,33,592
chr10	44516490	.	A	ATT	522.60	PASS	AB=0.667;AC=2;AF=0.036;AN=56;BaseQRankSum=6.737;DP=613;FS=1.931;HRun=1;HaplotypeScore=80.5241;InbreedingCoeff=-0.0371;MQ=85.64;MQ0=1;MQRankSum=-5.052;QD=12.44;ReadPosRankSum=0.812;VQSLOD=0.6305;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:99:0,99,1557	0/1:2,10:12:61.72:395,0,62	0/0:21,0:21:54.09:0,54,785	0/0:25,0:25:71.92:0,72,1062	0/0:26,0:26:78.25:0,78,1248	0/0:17,0:16:45.15:0,45,734	0/0:15,0:15:42.11:0,42,635	0/0:42,0:42:99:0,126,1957	0/0:13,0:13:33.11:0,33,535	0/0:31,0:31:93.31:0,93,1490	0/0:18,0:18:54.16:0,54,831	0/0:23,0:23:69.24:0,69,1125	0/0:24,0:24:72.25:0,72,1170	0/0:16,0:16:48.16:0,48,774	0/0:21,0:21:63.20:0,63,1001	0/0:25,0:25:75.25:0,75,1200	0/1:22,8:30:99:216,0,851	0/0:16,0:16:39.82:0,40,711	0/0:14,0:14:42.14:0,42,684	0/0:23,0:23:69.21:0,69,1075	0/0:15,0:15:45.15:0,45,730	0/0:30,0:30:90.29:0,90,1431	0/0:17,0:17:51.16:0,51,803	0/0:22,0:22:60.20:0,60,977	0/0:24,0:24:69.24:0,69,1125	0/0:25,0:25:75.25:0,75,1202	0/0:21,0:21:63.22:0,63,1027	0/0:14,0:14:42.14:0,42,684
chr10	44516491	.	G	GC	338.29	PASS	AB=0.677;AC=2;AF=0.036;AN=56;BaseQRankSum=6.813;DP=621;FS=4.561;HRun=0;HaplotypeScore=69.3532;InbreedingCoeff=-0.0370;MQ=87.55;MQ0=1;MQRankSum=-4.490;QD=7.87;ReadPosRankSum=0.635;VQSLOD=3.3011;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:99:0,99,1336	0/1:3,10:13:44.84:302,0,45	0/0:22,0:22:56.77:0,57,694	0/0:27,0:27:75.12:0,75,975	0/0:26,0:26:78.26:0,78,1089	0/0:17,0:16:48.14:0,48,653	0/0:15,0:15:42.14:0,42,585	0/0:42,0:42:99:0,120,1650	0/0:13,0:13:36.10:0,36,484	0/0:31,0:31:93.31:0,93,1290	0/0:17,0:17:51.17:0,51,713	0/0:23,0:23:69.23:0,69,965	0/0:25,0:25:72.24:0,72,1007	0/0:16,0:16:48.14:0,48,653	0/0:21,0:21:63.21:0,63,880	0/0:26,0:26:75.25:0,75,1049	0/1:22,8:30:99:125,0,717	0/0:17,0:17:47.19:0,47,635	0/0:14,0:14:42.14:0,42,587	0/0:22,0:22:66.22:0,66,923	0/0:15,0:15:45.15:0,45,629	0/0:31,0:31:90.29:0,90,1243	0/0:18,0:18:51.17:0,51,707	0/0:21,0:21:60.20:0,60,838	0/0:25,0:25:72.23:0,72,990	0/0:26,0:26:75.25:0,75,1049	0/0:21,0:21:63.21:0,63,881	0/0:14,0:14:42.14:0,42,582
chr10	44516636	.	AC	A	439.68	PASS	AB=0.720;AC=2;AF=0.036;AN=56;BaseQRankSum=7.004;DP=770;FS=0.000;HRun=1;HaplotypeScore=85.3703;InbreedingCoeff=-0.0370;MQ=75.11;MQ0=1;MQRankSum=-2.908;QD=7.58;ReadPosRankSum=2.623;VQSLOD=0.8676;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,102,1581	0/1:9,8:17:99:168,0,385	0/0:24,0:22:56.97:0,57,828	0/0:26,0:25:59.83:0,60,878	0/0:38,0:38:99:0,114,1774	0/0:21,0:21:63.20:0,63,983	0/0:14,0:14:42.13:0,42,643	0/0:28,0:28:84.28:0,84,1319	0/0:25,0:25:69.22:0,69,1077	0/0:32,0:32:93.31:0,93,1469	0/0:22,0:22:63.21:0,63,1007	0/0:27,0:27:81.28:0,81,1291	0/0:30,0:30:90.24:0,90,1392	0/0:24,0:24:72.25:0,72,1147	0/0:34,0:34:99:0,102,1557	0/0:28,0:28:84.29:0,84,1338	0/1:28,13:41:99:361,0,1188	0/0:27,0:27:81.22:0,81,1238	0/0:14,0:14:42.13:0,42,643	0/0:25,0:25:72.25:0,72,1148	0/0:38,0:38:99:0,114,1771	0/0:30,0:30:90.31:0,90,1435	0/0:25,0:25:72.25:0,72,1151	0/0:33,0:32:99:0,99,1535	0/0:17,0:16:51.17:0,51,811	0/0:39,0:39:99:0,117,1827	0/0:39,0:39:99:0,117,1756	0/0:18,0:18:54.18:0,54,855
chr10	44516657	.	T	TC	1331.01	PASS	AB=0.665;AC=2;AF=0.036;AN=56;BaseQRankSum=-5.501;DP=790;FS=0.648;HRun=0;HaplotypeScore=89.1111;InbreedingCoeff=-0.0370;MQ=76.75;MQ0=1;MQRankSum=-2.891;QD=22.18;ReadPosRankSum=2.129;VQSLOD=5.1969;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:90.30:0,90,1258	0/1:9,6:15:99:252,0,216	0/0:25,0:24:46.42:0,46,753	0/0:32,0:31:89.27:0,89,1164	0/0:33,0:33:99:0,99,1384	0/0:19,0:19:57.15:0,57,745	0/0:25,0:25:75.20:0,75,994	0/0:28,0:28:81.26:0,81,1116	0/0:26,0:26:75.25:0,75,1046	0/0:31,0:31:93.31:0,93,1301	0/0:22,0:22:63.19:0,63,859	0/0:25,0:25:75.25:0,75,1049	0/0:27,0:27:78.26:0,78,1088	0/0:28,0:28:81.27:0,81,1133	0/0:34,0:34:96.32:0,96,1342	0/0:27,0:27:72.23:0,72,991	0/1:17,28:45:99:1168,0,501	0/0:28,0:28:81.27:0,81,1131	0/0:15,0:14:42.13:0,42,570	0/0:28,0:28:78.26:0,78,1091	0/0:43,0:43:99:0,120,1613	0/0:21,0:21:63.21:0,63,881	0/0:23,0:23:66.22:0,66,922	0/0:42,0:41:99:0,123,1683	0/0:20,0:20:60.20:0,60,839	0/0:38,0:38:99:0,108,1510	0/0:41,0:41:99:0,117,1608	0/0:17,0:17:48.16:0,48,671
chr10	44517147	.	A	AT	9159.92	PASS	AB=1.000;AC=51;AF=0.911;AN=56;BaseQRankSum=4.169;DP=525;FS=0.000;HRun=5;HaplotypeScore=203.9755;InbreedingCoeff=-0.0905;MQ=68.31;MQ0=0;MQRankSum=-3.553;QD=17.45;ReadPosRankSum=8.514;VQSLOD=2.2149;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:39,0:39:73.10:723,73,0	1/1:7,5:12:35.70:338,36,0	0/1:15,0:15:56.85:73,0,57	0/1:15,0:15:3.22:179,0,3	1/1:17,0:17:6.59:279,7,0	1/1:14,0:14:38.64:295,39,0	0/1:16,0:16:5.97:222,0,6	0/1:19,0:19:5.51:216,0,6	1/1:16,0:16:41.58:311,42,0	1/1:24,0:24:65.27:471,65,0	1/1:15,0:15:14.91:252,15,0	1/1:19,0:19:49.08:384,49,0	1/1:22,0:22:56.69:436,57,0	1/1:23,0:23:68.72:540,69,0	1/1:22,0:22:56.10:453,56,0	1/1:20,0:20:59.56:449,60,0	1/1:21,5:26:44.56:391,45,0	1/1:22,0:22:13.25:307,13,0	1/1:17,0:17:26.61:261,27,0	1/1:18,0:18:29.24:342,29,0	0/1:13,0:13:12.57:134,0,13	1/1:13,0:13:11.22:221,11,0	1/1:15,0:15:11.17:222,11,0	1/1:14,0:14:26.58:187,27,0	1/1:18,0:18:31.67:257,32,0	1/1:17,0:17:41.28:294,41,0	1/1:37,0:37:99:825,105,0	1/1:7,0:7:13.63:97,14,0
chr10	44517286	.	CAATAAAA	C	229.68	PASS	AB=0.862;AC=2;AF=0.036;AN=56;BaseQRankSum=5.315;DP=662;FS=0.000;HRun=0;HaplotypeScore=176.5627;InbreedingCoeff=-0.0364;MQ=62.61;MQ0=2;MQRankSum=-3.669;QD=4.99;ReadPosRankSum=0.503;VQSLOD=2.3746;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:33:96.12:0,96,2928	0/1:13,6:19:99:301,0,749	0/0:25,0:17:45.11:0,45,1199	0/0:21,0:19:31.71:0,32,804	0/0:43,0:43:99:0,129,4338	0/0:12,0:12:33.11:0,33,1049	0/0:19,0:19:57.20:0,57,1906	0/0:27,0:27:75.26:0,75,2375	0/0:21,0:21:57.18:0,57,1826	0/0:24,0:24:72.23:0,72,2518	0/0:32,0:32:96.33:0,96,3484	0/0:22,0:22:66.19:0,66,2008	0/0:18,0:18:51.17:0,51,1658	0/0:24,0:24:72.16:0,72,2303	0/0:26,0:26:78.27:0,78,2856	0/0:21,0:21:59.73:0,60,1944	0/1:26,1:27:14.28:14,0,1381	0/0:36,0:36:99:0,105,3072	0/0:17,0:17:51.17:0,51,1580	0/0:30,0:30:90.30:0,90,3186	0/0:10,0:10:30.10:0,30,1046	0/0:20,0:20:60.16:0,60,1987	0/0:28,0:28:81.28:0,81,2886	0/0:22,0:22:63.21:0,63,2131	0/0:17,0:17:48.16:0,48,1628	0/0:23,0:23:69.23:0,69,2483	0/0:31,0:31:93.32:0,93,2971	0/0:13,0:13:39.13:0,39,1454
chr10	44517345	.	AAAAG	A	2760.06	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.342;DP=719;FS=2.952;HRun=0;HaplotypeScore=146.0616;InbreedingCoeff=0.9992;MQ=63.35;MQ0=0;MQRankSum=-2.986;QD=29.68;ReadPosRankSum=-2.743;VQSLOD=3.1800;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:34:92.01:0,92,2124	1/1:10,13:23:38.41:627,38,0	0/0:21,0:14:26.30:0,26,551	0/0:22,0:19:32.94:0,33,652	0/0:40,0:40:99:0,108,2509	0/0:24,0:24:69.24:0,69,1651	0/0:15,0:15:39.12:0,39,836	1/1:12,32:44:77.84:1386,78,0	0/0:21,0:21:51.18:0,51,1267	0/0:35,0:35:87.28:0,87,1993	0/0:36,0:36:87.28:0,87,2056	0/0:16,0:16:36.12:0,36,892	0/0:18,0:18:42.13:0,42,975	0/0:18,0:18:48.16:0,48,1081	0/0:22,0:22:48.04:0,48,1071	0/0:24,0:24:57.20:0,57,1373	1/1:12,14:26:51.17:890,51,0	0/0:29,0:29:66.12:0,66,1491	0/0:14,0:14:30.09:0,30,627	0/0:37,0:37:99:0,102,2278	0/0:17,0:17:45.14:0,45,1026	0/0:29,0:29:69.24:0,69,1652	0/0:31,0:31:86.94:0,87,1910	0/0:22,0:22:60.21:0,60,1457	0/0:17,0:17:42.14:0,42,1045	0/0:35,0:35:93.31:0,93,2179	0/0:27,0:27:72.16:0,72,1607	0/0:21,0:21:60.16:0,60,1389
chr10	44517476	.	C	CTT	929.39	PASS	AB=0.771;AC=2;AF=0.036;AN=56;BaseQRankSum=2.614;DP=674;FS=0.000;HRun=7;HaplotypeScore=102.9559;InbreedingCoeff=-0.0369;MQ=76.26;MQ0=0;MQRankSum=-2.627;QD=14.30;ReadPosRankSum=1.730;VQSLOD=0.6898;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:75.22:0,75,874	0/1:11,2:13:16.08:16,0,316	0/0:16,0:16:39.11:0,39,453	0/0:12,0:12:32.83:0,33,353	0/0:22,0:22:57.16:0,57,664	0/0:26,0:26:72.20:0,72,839	0/0:16,0:16:42.12:0,42,489	0/0:30,0:30:72.19:0,72,839	0/0:28,0:28:75.21:0,75,874	0/0:37,0:37:93.25:0,93,1069	0/0:19,0:19:48.12:0,48,548	0/0:36,0:36:90.24:0,90,1049	0/0:19,0:19:57.17:0,57,664	0/0:24,0:24:69.20:0,69,804	0/0:28,0:28:72.21:0,72,839	0/0:27,0:27:78.22:0,78,908	0/1:27,25:51:99:1000,0,564	0/0:15,0:15:33.09:0,33,385	0/0:21,0:21:48.11:0,48,547	0/0:30,0:30:87.24:0,87,1003	0/0:19,0:19:51.15:0,51,594	0/0:21,0:21:63.19:0,63,734	0/0:19,0:19:48.12:0,48,548	0/0:19,0:19:56.90:0,57,641	0/0:23,0:23:66.20:0,66,768	0/0:28,0:28:78.23:0,78,909	0/0:40,0:40:99:0,120,1367	0/0:6,0:6:18.01:0,18,185
chr10	44517848	.	CTCTGTA	C	586.05	PASS	AB=0.774;AC=2;AF=0.036;AN=56;BaseQRankSum=5.798;DP=629;FS=3.981;HRun=0;HaplotypeScore=135.9988;InbreedingCoeff=-0.0372;MQ=84.85;MQ0=0;MQRankSum=-5.576;QD=12.74;ReadPosRankSum=0.399;VQSLOD=2.7355;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:54.14:0,54,1720	0/1:11,8:19:99:526,0,777	0/0:20,0:20:59.99:0,60,1644	0/0:23,0:23:60.08:0,60,1478	0/0:30,0:30:84.27:0,84,2842	0/0:30,0:30:78.24:0,78,2573	0/0:18,0:18:45.13:0,45,1353	0/0:51,0:51:99:0,138,4265	0/0:17,0:17:51.16:0,51,1655	0/0:26,0:26:78.24:0,78,2467	0/0:26,0:26:72.22:0,72,2216	0/0:13,0:13:36.12:0,36,1262	0/0:21,0:21:54.13:0,54,1558	0/0:17,0:17:48.15:0,48,1546	0/0:26,0:26:75.23:0,75,2411	0/0:10,0:10:24.07:0,24,739	0/1:22,5:27:99:149,0,1389	0/0:19,0:19:57.20:0,57,1884	0/0:25,0:25:60.18:0,60,1860	0/0:32,0:32:96.30:0,96,3110	0/0:10,0:10:30.10:0,30,1052	0/0:32,0:32:90.27:0,90,2809	0/0:21,0:21:54.14:0,54,1730	0/0:13,0:13:30.09:0,30,970	0/0:28,0:28:84.26:0,84,2785	0/0:19,0:19:45.14:0,45,1401	0/0:24,0:24:60.17:0,60,1936	0/0:8,0:8:24.08:0,24,841
chr10	44517881	.	CAAAT	C	1947.51	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.183;DP=587;FS=0.630;HRun=0;HaplotypeScore=103.6707;InbreedingCoeff=0.9966;MQ=82.86;MQ0=0;MQRankSum=-6.855;QD=38.95;ReadPosRankSum=0.003;VQSLOD=3.8204;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:48.16:0,48,1224	1/1:4,21:25:53.92:1007,54,0	0/0:19,0:19:54.18:0,54,1373	0/0:18,0:18:45.11:0,45,1047	0/0:33,0:33:96.31:0,96,2424	0/0:31,0:31:90.31:0,90,2384	0/0:14,0:14:42.14:0,42,1114	0/0:38,0:38:99:0,105,2638	0/0:15,0:15:42.14:0,42,1088	0/0:23,0:23:63.22:0,63,1655	0/0:21,0:21:63.22:0,63,1678	0/0:13,0:13:36.12:0,36,960	0/0:17,0:17:51.16:0,51,1277	0/0:18,0:18:51.18:0,51,1329	0/0:20,0:20:57.20:0,57,1484	0/0:12,0:12:36.12:0,36,961	1/1:4,21:25:57.20:1062,57,0	0/0:20,0:20:54.19:0,54,1439	0/0:25,0:25:75.26:0,75,1967	0/0:29,0:29:84.27:0,84,2095	0/0:13,0:13:39.13:0,39,1035	0/0:35,0:35:96.33:0,96,2462	0/0:20,0:20:57.20:0,57,1487	0/0:8,0:8:24.07:0,24,549	0/0:29,0:29:81.28:0,81,2161	0/0:15,0:15:45.15:0,45,1198	0/0:25,0:25:72.25:0,72,1914	0/0:7,0:7:21.07:0,21,543
chr10	44517989	.	TCTAAC	T	81.94	PASS	AB=0.806;AC=2;AF=0.036;AN=56;BaseQRankSum=4.216;DP=583;FS=1.632;HRun=0;HaplotypeScore=109.7799;InbreedingCoeff=-0.0382;MQ=76.24;MQ0=0;MQRankSum=-4.159;QD=2.00;ReadPosRankSum=2.596;VQSLOD=2.1496;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:63.19:0,63,1833	0/1:7,5:12:99:114,0,572	0/0:13,0:13:37.37:0,37,1086	0/0:13,0:13:39.13:0,39,1113	0/0:34,0:34:99:0,102,3171	0/0:20,0:20:60.21:0,60,1937	0/0:22,0:22:66.23:0,66,2084	0/0:35,0:35:99:0,105,3228	0/0:20,0:20:60.21:0,60,1850	0/0:25,0:25:75.25:0,75,2209	0/0:20,0:20:60.21:0,60,1912	0/0:16,0:16:48.16:0,48,1566	0/0:16,0:16:48.16:0,48,1599	0/0:18,0:18:54.19:0,54,1749	0/0:26,0:26:78.27:0,78,2566	0/0:18,0:18:54.19:0,54,1776	0/1:26,3:29:56.81:57,0,2323	0/0:18,0:17:54.19:0,54,1772	0/0:19,0:19:57.20:0,57,1834	0/0:31,0:31:93.30:0,93,2897	0/0:4,0:4:12.04:0,12,396	0/0:17,0:17:51.18:0,51,1624	0/0:24,0:24:69.24:0,69,2151	0/0:16,0:16:45.15:0,45,1438	0/0:30,0:30:90.31:0,90,2933	0/0:28,0:28:84.29:0,84,2692	0/0:28,0:28:84.29:0,84,2611	0/0:10,0:10:30.10:0,30,934
chr10	44518120	.	G	GT	970.53	PASS	AB=0.677;AC=2;AF=0.036;AN=56;BaseQRankSum=5.770;DP=723;FS=1.518;HRun=2;HaplotypeScore=68.7779;InbreedingCoeff=-0.0370;MQ=74.40;MQ0=0;MQRankSum=-2.652;QD=14.27;ReadPosRankSum=2.264;VQSLOD=3.2534;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:63.20:0,63,780	0/1:12,12:24:99:446,0,374	0/0:25,0:25:69.17:0,69,821	0/0:16,0:16:39.12:0,39,467	0/0:33,0:33:93.29:0,93,1153	0/0:21,0:21:63.20:0,63,781	0/0:36,0:36:99:0,105,1302	0/0:35,0:35:96.29:0,96,1171	0/0:21,0:21:63.20:0,63,780	0/0:30,0:30:87.27:0,87,1079	0/0:23,0:23:69.22:0,69,855	0/0:20,0:20:60.19:0,60,744	0/0:19,0:19:57.18:0,57,706	0/0:19,0:19:54.17:0,54,669	0/0:30,0:30:84.26:0,84,1041	0/0:22,0:22:66.21:0,66,818	0/1:24,20:44:99:613,0,735	0/0:26,0:26:75.21:0,75,915	0/0:22,0:22:60.19:0,60,743	0/0:26,0:26:78.23:0,78,953	0/0:30,0:30:87.27:0,87,1079	0/0:31,0:31:90.25:0,90,1088	0/0:23,0:23:63.20:0,63,781	0/0:25,0:25:75.24:0,75,930	0/0:29,0:29:87.26:0,87,1060	0/0:21,0:21:60.17:0,60,721	0/0:36,0:36:99:0,102,1265	0/0:15,0:15:45.14:0,45,557
chr10	44518636	.	A	AATTAC	1688.38	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.405;DP=689;FS=9.922;HRun=0;HaplotypeScore=131.8759;InbreedingCoeff=0.9109;MQ=69.61;MQ0=0;MQRankSum=-8.144;QD=35.92;ReadPosRankSum=-0.784;VQSLOD=2.6602;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,114,2518	1/1:1,8:15:29.67:580,30,0	0/0:7,0:7:18.05:0,18,278	0/0:10,0:10:2.88:0,3,60	0/0:25,0:25:72.25:0,72,1677	0/0:21,0:21:63.20:0,63,1390	0/0:27,0:27:81.28:0,81,1866	0/0:29,0:29:87.29:0,87,1914	0/0:27,0:27:81.28:0,81,1824	0/0:32,0:32:90.29:0,90,1911	0/0:23,0:23:69.24:0,69,1607	0/0:27,0:27:81.26:0,81,1769	0/0:22,0:22:66.23:0,66,1494	0/0:18,0:18:51.18:0,51,1188	0/0:21,0:21:63.20:0,63,1370	0/0:28,0:28:81.28:0,81,1828	1/1:6,15:32:29.10:1229,29,0	0/0:22,0:22:60.20:0,60,1364	0/0:21,0:21:63.22:0,63,1365	0/0:28,0:28:84.27:0,84,1904	0/0:35,0:35:99:0,102,2306	0/0:21,0:21:63.21:0,63,1423	0/0:21,0:21:60.19:0,60,1353	0/0:33,0:33:96.33:0,96,2174	0/0:27,0:27:81.25:0,81,1790	0/0:27,0:27:81.28:0,81,1800	0/0:36,0:36:99:0,108,2514	0/0:14,0:14:42.14:0,42,978
chr10	44519028	.	AG	A	2837.43	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=11.522;DP=727;FS=4.969;HRun=1;HaplotypeScore=73.6368;InbreedingCoeff=1.0000;MQ=82.77;MQ0=0;MQRankSum=-1.881;QD=37.33;ReadPosRankSum=2.375;VQSLOD=4.3122;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,114,1788	1/1:1,23:24:63.20:862,63,0	0/0:21,0:21:63.20:0,63,982	0/0:21,0:21:57.16:0,57,824	0/0:27,0:27:81.26:0,81,1270	0/0:17,0:17:51.17:0,51,815	0/0:35,0:35:99:0,105,1631	0/0:26,0:26:75.24:0,75,1155	0/0:28,0:28:81.24:0,81,1268	0/0:29,0:29:87.27:0,87,1364	0/0:24,0:24:72.23:0,72,1122	0/0:30,0:30:87.30:0,87,1381	0/0:23,0:23:69.24:0,69,1099	0/0:19,0:19:57.19:0,57,906	0/0:31,0:31:93.32:0,93,1479	0/0:38,0:38:99:0,114,1820	1/1:0,52:52:99:2097,151,0	0/0:22,0:22:66.22:0,66,1047	0/0:25,0:25:75.24:0,75,1173	0/0:25,0:25:75.23:0,75,1148	0/0:31,0:31:84.17:0,84,1239	0/0:19,0:19:57.19:0,57,909	0/0:18,0:18:51.14:0,51,786	0/0:20,0:20:60.20:0,60,959	0/0:19,0:19:55.05:0,55,841	0/0:23,0:23:69.23:0,69,1078	0/0:28,0:28:84.26:0,84,1298	0/0:14,0:14:42.14:0,42,665
chr10	44519468	.	A	AT	591.68	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=-5.743;DP=461;FS=3.912;HRun=8;HaplotypeScore=100.1056;InbreedingCoeff=0.6607;MQ=65.73;MQ0=0;MQRankSum=2.107;QD=18.49;ReadPosRankSum=-2.904;VQSLOD=2.6198;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:35.61:0,36,311	0/0:15,0:18:43.46:0,43,212	0/0:11,0:8:13.46:0,13,83	0/1:6,0:5:4.87:5,0,12	0/0:22,0:22:59.21:0,59,513	0/0:22,0:22:62.92:0,63,559	0/0:14,0:14:42:0,42,376	1/1:5,21:26:63.14:686,63,0	0/0:15,0:15:42.01:0,42,381	0/0:17,0:17:44.89:0,45,372	0/0:20,0:20:57.03:0,57,520	0/0:14,0:14:33.88:0,34,348	0/0:15,0:15:36.47:0,36,324	0/0:11,0:11:26.69:0,27,230	0/0:26,0:26:59.57:0,60,563	0/0:8,0:8:21.01:0,21,192	0/0:21,0:33:74.48:0,74,301	0/0:26,0:26:74.82:0,75,665	0/0:24,0:25:47.43:0,47,400	0/0:21,0:21:50.97:0,51,435	0/0:2,0:2:6:0,6,55	0/0:14,0:14:37.99:0,38,315	0/0:10,0:10:29.59:0,30,248	0/0:6,0:6:18.01:0,18,164	0/0:9,0:9:27:0,27,241	0/0:26,0:26:63:0,63,557	0/0:21,0:21:53.49:0,53,457	0/0:10,0:10:30.02:0,30,274
chr10	44519476	.	TA	T	729.70	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.047;DP=450;FS=0.000;HRun=7;HaplotypeScore=97.0413;InbreedingCoeff=0.8464;MQ=64.77;MQ0=0;MQRankSum=-1.098;QD=14.31;ReadPosRankSum=2.029;VQSLOD=3.3544;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:39.98:0,40,452	1/1:6,13:19:31:309,31,0	0/0:9,0:6:6.03:0,6,58	0/0:6,0:5:3:0,3,25	0/0:21,0:21:58.06:0,58,685	0/0:25,0:25:72.19:0,72,846	0/0:15,0:15:42.11:0,42,497	0/0:24,0:24:62.64:0,63,473	0/0:15,0:15:42.12:0,42,509	0/0:16,0:16:39.12:0,39,472	0/0:22,0:22:66.03:0,66,753	0/0:14,0:14:41.96:0,42,488	0/0:13,0:13:39.10:0,39,459	0/0:11,0:11:30.05:0,30,337	0/0:23,0:24:63.02:0,63,733	0/0:9,0:9:27.05:0,27,302	1/1:14,18:32:66.68:541,67,0	0/0:28,0:28:81.18:0,81,943	0/0:18,0:18:47.59:0,48,552	0/0:17,0:17:45.13:0,45,538	0/0:3,0:3:9:0,9,96	0/0:13,0:13:33.10:0,33,400	0/0:11,0:11:30.05:0,30,338	0/0:8,0:8:24.03:0,24,264	0/0:10,0:10:30.08:0,30,351	0/0:22,0:22:63.17:0,63,749	0/0:20,0:20:54.14:0,54,631	0/0:11,0:11:33.08:0,33,387
chr10	44519975	.	AC	A	1225.18	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.094;DP=809;FS=0.630;HRun=2;HaplotypeScore=83.8681;InbreedingCoeff=0.9995;MQ=88.14;MQ0=0;MQRankSum=-0.343;QD=32.24;ReadPosRankSum=-5.719;VQSLOD=1.5378;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,138,2042	0/0:25,0:25:69.23:0,69,1026	0/0:34,0:34:99:0,99,1472	0/0:24,0:24:57.26:0,57,778	0/0:24,0:24:69.23:0,69,1034	0/0:23,0:23:69.23:0,69,1033	0/0:42,0:42:99:0,123,1821	1/1:1,37:38:99:1320,108,0	0/0:41,0:41:99:0,123,1816	0/0:23,0:23:69.22:0,69,1004	0/0:17,0:17:51.17:0,51,757	0/0:20,0:20:60.19:0,60,880	0/0:35,0:35:99:0,102,1517	0/0:37,0:37:99:0,108,1575	0/0:30,0:30:90.30:0,90,1348	0/0:31,0:31:93.31:0,93,1386	0/0:59,0:59:99:0,175,2521	0/0:22,0:22:63.21:0,63,942	0/0:26,0:26:75.23:0,75,1079	0/0:26,0:26:78.25:0,78,1150	0/0:29,0:29:84.28:0,84,1243	0/0:28,0:28:81.26:0,81,1192	0/0:22,0:22:66.21:0,66,967	0/0:19,0:19:57.19:0,57,854	0/0:28,0:28:84.26:0,84,1221	0/0:19,0:19:57.18:0,57,835	0/0:31,0:31:93.27:0,93,1365	0/0:10,0:10:30.10:0,30,450
chr10	44520285	.	CG	C	667.39	PASS	AB=0.723;AC=2;AF=0.036;AN=56;BaseQRankSum=8.471;DP=888;FS=3.567;HRun=4;HaplotypeScore=92.1663;InbreedingCoeff=-0.0373;MQ=83.31;MQ0=0;MQRankSum=-3.395;QD=8.56;ReadPosRankSum=1.649;VQSLOD=0.5393;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,147,2037	0/1:9,6:15:99:170,0,331	0/0:23,0:23:59.36:0,59,831	0/0:29,0:29:81.13:0,81,1022	0/0:27,0:27:81.27:0,81,1132	0/0:25,0:25:72.24:0,72,1006	0/0:40,0:40:99:0,108,1472	0/0:35,0:35:99:0,102,1397	0/0:40,0:40:99:0,114,1525	0/0:34,0:34:96.32:0,96,1343	0/0:18,0:18:54.13:0,54,688	0/0:35,0:35:96.31:0,96,1326	0/0:37,0:37:99:0,99,1383	0/0:37,0:37:99:0,105,1436	0/0:43,0:43:99:0,123,1658	0/0:33,0:32:93.29:0,93,1268	0/1:40,23:63:99:586,0,1227	0/0:24,0:24:66.22:0,66,924	0/0:19,0:19:51.17:0,51,708	0/0:23,0:23:66.22:0,66,923	0/0:56,0:56:99:0,166,2245	0/0:26,0:26:69.23:0,69,964	0/0:26,0:26:66.14:0,66,863	0/0:29,0:29:75.24:0,75,1032	0/0:30,0:30:87.28:0,87,1201	0/0:25,0:25:69.23:0,69,965	0/0:40,0:39:99:0,108,1436	0/0:6,0:6:18.06:0,18,252
chr10	44520511	.	GGACC	G	471.40	PASS	AB=0.785;AC=2;AF=0.036;AN=56;BaseQRankSum=6.553;DP=618;FS=5.375;HRun=0;HaplotypeScore=113.4297;InbreedingCoeff=-0.0379;MQ=76.15;MQ0=0;MQRankSum=-3.910;QD=9.82;ReadPosRankSum=1.038;VQSLOD=2.7851;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:93.32:0,93,2466	0/1:12,9:21:99:463,0,764	0/0:13,0:13:13.55:0,14,404	0/0:33,0:25:38.50:0,38,1079	0/0:34,0:34:99:0,99,2680	0/0:33,0:33:99:0,99,2621	0/0:16,0:16:45.15:0,45,1198	0/0:35,0:35:93.32:0,93,2531	0/0:17,0:17:48.16:0,48,1314	0/0:23,0:23:66.23:0,66,1765	0/0:20,0:20:60.21:0,60,1609	0/0:23,0:23:66.23:0,66,1794	0/0:15,0:15:45.11:0,45,1156	0/0:24,0:24:72.25:0,72,1824	0/0:13,0:13:39.13:0,39,1035	0/0:13,0:13:39.13:0,39,1036	0/1:23,4:27:97.45:97,0,1734	0/0:25,0:25:72.25:0,72,1931	0/0:22,0:22:63.22:0,63,1705	0/0:25,0:25:75.26:0,75,2032	0/0:14,0:14:39.12:0,39,1009	0/0:20,0:20:60.21:0,60,1567	0/0:31,0:31:93.29:0,93,2413	0/0:13,0:13:39.08:0,39,949	0/0:24,0:24:69.20:0,69,1775	0/0:23,0:23:69.24:0,69,1890	0/0:22,0:22:66.23:0,66,1800	0/0:8,0:8:24.08:0,24,657
chr10	44521196	.	A	AGGATGTG	2676.33	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=7.769;DP=680;FS=11.042;HRun=0;HaplotypeScore=173.1823;InbreedingCoeff=0.9833;MQ=86.03;MQ0=0;MQRankSum=-7.777;QD=60.83;ReadPosRankSum=-1.047;VQSLOD=3.0410;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,120,3346	1/1:0,8:8:18.06:640,18,0	0/0:23,0:23:63.20:0,63,1462	0/0:25,0:25:63.18:0,63,1516	0/0:22,0:22:54.14:0,54,1398	0/0:20,0:20:57.20:0,57,1593	0/0:29,0:29:87.30:0,87,2373	1/1:2,4:6:18.05:510,18,0	0/0:25,0:25:75.24:0,75,1992	0/0:34,0:34:99:0,99,2758	0/0:17,0:17:39.13:0,39,1090	0/0:23,0:23:69.22:0,69,1821	0/0:18,0:18:51.16:0,51,1354	0/0:26,0:26:78.27:0,78,2084	0/0:25,0:25:72.25:0,72,1992	0/0:22,0:22:63.22:0,63,1754	1/1:11,18:30:63.77:1667,64,0	0/0:21,0:21:60.18:0,60,1603	0/0:35,0:35:99:0,102,2570	0/0:25,0:25:69.24:0,69,1831	0/0:46,0:46:99:0,125,3526	0/0:35,0:35:81.21:0,81,2063	0/0:17,0:17:42.14:0,42,1148	0/0:32,0:32:93.28:0,93,2523	0/0:20,0:20:51.18:0,51,1426	0/0:20,0:20:60.16:0,60,1568	0/0:31,0:30:93.32:0,93,2600	0/0:4,0:4:12.04:0,12,336
chr10	44521197	.	C	CTGG	1855.46	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=10.497;DP=698;FS=5.941;HRun=0;HaplotypeScore=131.7082;InbreedingCoeff=0.9886;MQ=85.13;MQ0=0;MQRankSum=-8.668;QD=32.55;ReadPosRankSum=-2.457;VQSLOD=3.1140;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,120,2224	1/1:3,8:11:27.09:498,27,0	0/0:24,0:24:63.04:0,63,1052	0/0:24,0:24:63.18:0,63,1032	0/0:23,0:23:54.18:0,54,986	0/0:20,0:20:60.19:0,60,1089	0/0:29,0:29:87.28:0,87,1591	1/1:7,4:11:31.62:517,32,0	0/0:26,0:26:75.26:0,75,1391	0/0:35,0:35:99:0,99,1844	0/0:17,0:17:39.13:0,39,727	0/0:24,0:24:69.24:0,69,1281	0/0:18,0:18:54.17:0,54,968	0/0:26,0:26:78.26:0,78,1401	0/0:25,0:25:72.25:0,72,1331	0/0:22,0:22:63.22:0,63,1163	1/1:17,18:35:64.33:983,64,0	0/0:21,0:21:60.21:0,60,1110	0/0:36,0:36:99:0,102,1822	0/0:25,0:25:69.19:0,69,1227	0/0:46,0:46:99:0,125,2334	0/0:34,0:34:87.27:0,87,1529	0/0:17,0:17:45.14:0,45,808	0/0:31,0:31:90.31:0,90,1678	0/0:20,0:20:51.17:0,51,951	0/0:21,0:21:60.20:0,60,1069	0/0:32,0:31:93.32:0,93,1734	0/0:4,0:4:12.04:0,12,224
chr10	44521229	.	G	GT	5522.87	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-13.532;DP=683;FS=2.171;HRun=2;HaplotypeScore=83.5759;InbreedingCoeff=0.9532;MQ=84.48;MQ0=0;MQRankSum=-1.935;QD=37.32;ReadPosRankSum=1.351;VQSLOD=5.4581;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,108,1311	0/0:14,0:14:30.09:0,30,372	0/0:22,0:22:58.45:0,58,718	0/0:23,0:23:49.18:0,49,625	0/0:33,0:33:90.27:0,90,1100	0/0:14,0:14:42.12:0,42,508	0/0:22,0:22:63.18:0,63,767	0/0:28,0:28:78.24:0,78,936	0/0:20,0:20:60.19:0,60,744	1/1:2,29:31:84.28:1209,84,0	1/1:1,25:26:66.17:908,66,0	0/0:27,0:27:78.21:0,78,936	0/0:24,0:24:69.22:0,69,855	0/0:20,0:20:60.17:0,60,730	1/1:0,25:25:72.24:1029,72,0	1/1:0,22:22:60.20:864,60,0	0/0:36,0:36:68.27:0,68,864	1/1:1,26:27:75.25:1080,75,0	0/0:30,0:30:84.26:0,84,1041	0/0:28,0:28:81.24:0,81,988	0/0:38,0:38:99:0,108,1339	0/0:35,0:35:99:0,105,1289	0/0:16,0:16:45.14:0,45,558	0/0:21,0:21:60.19:0,60,740	1/1:3,14:17:30.10:432,30,0	0/0:14,1:15:1.90:0,2,453	0/0:28,0:28:81.25:0,81,999	0/0:5,0:5:12.04:0,12,149
chr10	44521461	.	G	GA	13367.61	PASS	AB=0.783;AC=54;AF=0.964;AN=56;BaseQRankSum=-2.121;DP=394;FS=4.968;HRun=2;HaplotypeScore=175.1034;InbreedingCoeff=-0.0452;MQ=58.24;MQ0=0;MQRankSum=-2.847;QD=33.93;ReadPosRankSum=2.986;VQSLOD=4.1668;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,19:20:54.13:762,54,0	1/1:1,5:6:18.04:235,18,0	0/1:7,4:10:22.14:178,0,22	0/1:12,3:13:37.91:103,0,38	1/1:2,11:13:20.97:253,21,0	1/1:1,7:8:24:317,24,0	1/1:0,18:18:54.18:773,54,0	1/1:2,14:16:42.11:581,42,0	1/1:0,13:13:39.13:554,39,0	1/1:0,19:19:57.19:812,57,0	1/1:0,14:14:42.14:596,42,0	1/1:1,17:18:51.17:713,51,0	1/1:2,12:14:39.13:552,39,0	1/1:0,14:14:42.14:590,42,0	1/1:1,14:15:36.12:515,36,0	1/1:1,18:19:33.03:471,33,0	1/1:7,24:31:82.37:1180,82,0	1/1:1,8:9:18.06:251,18,0	1/1:1,7:7:21.07:298,21,0	1/1:1,12:13:36.03:455,36,0	1/1:4,11:14:21.07:298,21,0	1/1:2,11:13:39.09:533,39,0	1/1:4,8:12:30.09:399,30,0	1/1:1,13:14:4.71:186,5,0	1/1:1,14:15:45.15:639,45,0	1/1:4,13:17:48.07:630,48,0	1/1:2,9:11:27.06:363,27,0	1/1:0,3:3:9.03:129,9,0
chr10	44521469	.	GA	G	3962.47	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=2.298;DP=358;FS=6.967;HRun=4;HaplotypeScore=203.9615;InbreedingCoeff=0.7337;MQ=54.28;MQ0=0;MQRankSum=-3.204;QD=11.83;ReadPosRankSum=2.019;VQSLOD=1.4496;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:18:39.74:239,40,0	1/1:5,0:5:8.99:73,9,0	0/0:9,0:7:11.25:0,11,115	0/0:14,0:13:13.10:0,13,110	1/1:13,0:13:19.75:98,20,0	1/1:8,0:8:12.58:94,13,0	1/1:19,0:19:33:189,33,0	1/1:12,0:13:26.68:181,27,0	1/1:13,0:13:32.02:170,32,0	1/1:19,0:19:44.37:300,44,0	1/1:13,1:14:9.50:91,10,0	1/1:17,0:17:47.38:278,47,0	1/1:12,0:12:25.18:123,25,0	1/1:14,0:14:31.27:206,31,0	1/1:13,1:14:34.76:209,35,0	1/1:13,0:13:12.07:111,12,0	1/1:24,1:25:58.24:408,58,0	1/1:6,0:6:5.85:46,6,0	1/1:6,0:6:8.62:53,9,0	1/1:12,0:12:25.90:161,26,0	1/1:12,1:13:7.99:64,8,0	1/1:12,0:12:25.91:139,26,0	1/1:10,0:10:19.64:106,20,0	1/1:12,1:14:9.04:60,9,0	1/1:14,1:15:25.99:139,26,0	1/1:16,0:16:38.24:242,38,0	1/1:9,1:10:13.75:125,14,0	1/1:3,0:3:8.87:57,9,0
chr10	44521470	.	AAAAG	A	3572.46	PASS	AB=0.872;AC=42;AF=0.750;AN=56;BaseQRankSum=-1.576;DP=356;FS=3.373;HRun=0;HaplotypeScore=219.7414;InbreedingCoeff=0.0805;MQ=54.31;MQ0=0;MQRankSum=-0.082;QD=11.27;ReadPosRankSum=-3.704;VQSLOD=2.7719;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:17,1:18:6.24:112,6,0	1/1:5,0:5:9.03:120,9,0	0/1:9,0:7:16.44:16,0,125	0/0:14,0:13:6.54:0,7,132	0/0:11,2:13:9.05:0,9,24	0/1:7,1:8:17.52:43,0,18	1/1:13,5:18:14.56:215,15,0	1/1:10,3:13:24.02:180,24,0	0/1:12,1:13:18.85:23,0,19	1/1:16,3:19:30.31:203,30,0	0/1:10,4:14:15.38:15,0,40	1/1:15,2:17:2.27:153,2,0	1/1:10,2:12:0.23:67,0,0	0/1:11,3:14:29.10:165,0,29	1/1:11,3:14:14.67:228,15,0	0/1:11,2:13:21.44:55,0,21	1/1:14,10:24:62.64:926,63,0	1/1:5,1:6:6.02:88,6,0	1/1:6,1:6:11.11:88,11,0	0/1:10,2:12:2.95:86,0,3	1/1:10,3:13:14.03:169,14,0	0/0:10,2:12:5.84:0,6,18	1/1:8,2:10:12.23:113,12,0	1/1:12,2:14:16.25:156,16,0	1/1:12,3:15:3.07:38,3,0	1/1:15,1:16:20.94:146,21,0	0/1:8,2:10:24.04:104,0,24	1/1:2,1:3:5.81:62,6,0
chr10	44521471	.	A	AG	3048.05	PASS	AB=0.667;AC=51;AF=0.911;AN=56;BaseQRankSum=2.621;DP=306;FS=11.532;HRun=0;HaplotypeScore=193.0629;InbreedingCoeff=0.5712;MQ=51.25;MQ0=0;MQRankSum=-3.683;QD=10.62;ReadPosRankSum=3.445;VQSLOD=3.5022;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,14:16:34.98:193,35,0	1/1:0,3:3:9.01:85,9,0	0/0:7,0:5:11.26:0,11,81	0/0:12,0:11:9.95:0,10,70	1/1:2,7:10:18.41:81,18,0	1/1:2,5:7:9.76:62,10,0	1/1:5,10:15:36.72:166,37,0	1/1:4,7:11:29.42:189,29,0	1/1:1,12:13:33.93:157,34,0	1/1:3,12:15:42.05:255,42,0	1/1:5,7:12:10.80:83,11,0	1/1:3,14:17:41.74:201,42,0	1/1:2,8:10:22.63:105,23,0	1/1:3,10:13:18.49:130,18,0	1/1:7,7:14:33.54:162,34,0	1/1:4,6:10:7.64:90,8,0	1/1:14,8:22:44.74:358,45,0	1/1:1,1:2:4.66:18,5,0	1/1:2,3:4:7.18:62,7,0	1/1:2,8:10:21.40:97,21,0	1/1:6,4:10:3.95:41,4,0	1/1:2,10:12:24.13:115,24,0	1/1:2,8:10:15.25:67,15,0	0/1:5,5:10:1.54:24,0,2	1/1:5,9:14:25.32:121,25,0	1/1:2,12:14:31.18:199,31,0	1/1:5,4:9:5.53:63,6,0	1/1:1,2:3:8.65:45,9,0
chr10	44521474	.	GA	G	2363.48	PASS	AB=0.846;AC=52;AF=0.929;AN=56;BaseQRankSum=4.698;DP=306;FS=4.218;HRun=4;HaplotypeScore=195.2709;InbreedingCoeff=0.2758;MQ=51.11;MQ0=0;MQRankSum=-2.792;QD=8.01;ReadPosRankSum=4.970;VQSLOD=0.3420;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,15:16:35.30:175,35,0	1/1:0,3:3:8.91:61,9,0	0/1:8,0:6:0.07:0,0,70	0/0:10,1:10:1.35:0,1,52	1/1:4,7:11:19.60:86,20,0	1/1:2,5:7:13.29:52,13,0	1/1:6,10:16:31.80:159,32,0	1/1:3,7:10:25.83:135,26,0	1/1:1,12:13:27.80:115,28,0	1/1:4,12:16:39.99:233,40,0	1/1:5,7:12:1.67:49,2,0	1/1:3,14:17:33.01:151,33,0	1/1:4,8:12:24.10:95,24,0	1/1:3,10:13:17.22:95,17,0	1/1:4,7:11:19.49:92,19,0	1/1:4,6:10:20.54:85,21,0	1/1:12,8:20:39.88:244,40,0	1/1:1,1:2:0.18:6,0,0	1/1:1,3:3:1.18:25,1,0	1/1:2,8:10:16.78:68,17,0	1/1:9,4:13:3.23:18,3,0	1/1:2,10:12:23.40:93,23,0	1/1:2,8:10:9.70:44,10,0	1/1:3,6:9:0.81:34,1,0	1/1:5,9:14:26.68:110,27,0	1/1:2,12:14:37.22:178,37,0	0/1:5,4:9:6.88:27,0,7	1/1:1,2:3:8.44:40,8,0
chr10	44521475	.	A	AG	6359.65	PASS	AB=1.000;AC=53;AF=0.946;AN=56;BaseQRankSum=2.416;DP=332;FS=3.900;HRun=2;HaplotypeScore=194.5731;InbreedingCoeff=0.4689;MQ=48.02;MQ0=0;MQRankSum=-2.636;QD=19.63;ReadPosRankSum=4.322;VQSLOD=4.8742;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:18:46.48:437,46,0	1/1:3,0:3:9.02:92,9,0	0/0:8,0:6:6.82:0,7,83	0/1:10,0:9:9.97:10,0,28	1/1:11,0:11:25.03:190,25,0	1/1:6,1:7:20.88:175,21,0	1/1:15,1:16:47.82:392,48,0	1/1:11,0:11:30:273,30,0	1/1:13,0:13:38.14:315,38,0	1/1:16,0:16:44.20:392,44,0	1/1:13,0:13:28.23:246,28,0	1/1:17,0:17:45.16:365,45,0	1/1:12,2:14:35.86:330,36,0	1/1:13,0:13:33.37:280,33,0	1/1:12,0:12:29.88:241,30,0	1/1:12,1:13:29.98:275,30,0	1/1:19,1:21:53.20:431,53,0	1/1:2,0:2:4.81:29,5,0	1/1:6,0:5:7.56:57,8,0	1/1:12,0:12:27.37:244,27,0	1/1:11,5:15:14.93:144,15,0	1/1:13,0:13:26.94:230,27,0	1/1:11,0:11:16.73:148,17,0	1/1:12,0:12:14.74:148,15,0	1/1:14,1:15:29.97:263,30,0	1/1:15,1:16:47.89:422,48,0	1/1:9,1:10:20.78:156,21,0	1/1:3,0:3:8.98:74,9,0
chr10	44521482	.	A	AT	269.28	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=4.486;DP=359;FS=19.154;HRun=0;HaplotypeScore=220.5832;InbreedingCoeff=0.6396;MQ=44.24;MQ0=0;MQRankSum=-1.669;QD=8.69;ReadPosRankSum=1.778;VQSLOD=2.3298;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:40.41:0,40,236	1/1:1,3:4:9.01:85,9,0	0/0:9,0:5:3.90:0,4,42	0/1:6,0:5:0.27:0,0,12	0/0:13,0:13:21.18:0,21,123	0/0:8,0:8:12.82:0,13,90	0/0:16,0:16:37.22:0,37,184	0/0:15,0:15:40.02:0,40,275	0/0:13,0:13:27.95:0,28,146	0/0:17,0:17:44.01:0,44,272	0/0:13,0:13:21.42:0,21,91	0/0:20,0:20:49.11:0,49,262	0/0:14,0:14:31.46:0,31,193	0/0:14,0:14:9.10:0,9,93	0/0:11,0:11:19.53:0,20,102	0/0:14,0:14:24.05:0,24,196	1/1:13,8:21:18.53:295,19,0	0/0:4,0:4:8.34:0,8,64	0/0:9,0:8:18.63:0,19,169	0/0:14,0:14:19.07:0,19,139	0/0:18,0:17:6.69:0,7,53	0/0:14,0:14:20.85:0,21,84	0/0:14,0:14:13.80:0,14,62	0/0:12,0:12:7.64:0,8,71	0/0:16,0:16:32.89:0,33,198	0/0:16,0:16:43.35:0,43,260	0/0:12,0:12:16.74:0,17,120	0/0:3,0:3:6.75:0,7,37
chr10	44521490	.	G	GGA	651.86	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=3.316;DP=402;FS=20.795;HRun=0;HaplotypeScore=228.5942;InbreedingCoeff=0.6893;MQ=51.78;MQ0=0;MQRankSum=-0.974;QD=15.90;ReadPosRankSum=-0.858;VQSLOD=2.0814;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:52.69:0,53,662	1/1:4,3:7:11.97:173,12,0	0/0:10,0:6:11.96:0,12,107	0/1:9,0:9:12.20:12,0,80	0/0:12,0:12:26.73:0,27,377	0/0:9,0:9:27.05:0,27,338	0/0:20,0:20:30.99:0,31,398	0/0:21,0:21:50.13:0,50,608	0/0:16,0:16:42.07:0,42,548	0/0:17,0:17:45.14:0,45,623	0/0:10,0:10:24.07:0,24,331	0/0:19,0:19:52.03:0,52,712	0/0:16,0:16:32.87:0,33,398	0/0:12,0:12:33.07:0,33,440	0/0:14,0:14:22.92:0,23,316	0/0:17,0:17:37.26:0,37,472	1/1:14,8:24:47.57:590,48,0	0/0:3,0:3:5.72:0,6,82	0/0:16,0:15:33.01:0,33,371	0/0:14,0:14:36.45:0,36,415	0/0:20,0:19:8.85:0,9,92	0/0:16,0:16:28.30:0,28,402	0/0:14,0:14:17.97:0,18,218	0/0:11,0:11:13.42:0,13,146	0/0:16,0:16:39.09:0,39,507	0/0:18,0:18:51.98:0,52,675	0/0:15,0:15:24.62:0,25,360	0/0:5,0:5:13.26:0,13,137
chr10	44522191	.	A	AT	101.02	PASS	AB=0.792;AC=2;AF=0.036;AN=56;BaseQRankSum=6.123;DP=701;FS=36.606;HRun=0;HaplotypeScore=80.8442;InbreedingCoeff=-0.0370;MQ=83.67;MQ0=0;MQRankSum=-6.125;QD=1.71;ReadPosRankSum=-0.898;VQSLOD=0.4097;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,111,1536	0/1:10,7:17:81.02:81,0,374	0/0:26,0:26:74.27:0,74,1003	0/0:22,0:22:59.61:0,60,742	0/0:28,0:28:84.28:0,84,1172	0/0:25,0:25:75.23:0,75,1031	0/0:26,0:26:78.26:0,78,1091	0/0:37,0:37:99:0,108,1496	0/0:24,0:24:72.24:0,72,1006	0/0:35,0:35:99:0,105,1446	0/0:28,0:28:81.27:0,81,1132	0/0:21,0:21:63.20:0,63,864	0/0:20,0:20:60.20:0,60,838	0/0:21,0:21:63.21:0,63,881	0/0:23,0:23:69.23:0,69,964	0/0:26,0:26:75.24:0,75,1033	0/1:36,6:42:99:109,0,1259	0/0:18,0:18:54.16:0,54,737	0/0:15,0:15:42.14:0,42,587	0/0:23,0:23:69.23:0,69,964	0/0:27,0:27:81.27:0,81,1133	0/0:28,0:28:84.28:0,84,1174	0/0:31,0:31:87.29:0,87,1217	0/0:30,0:30:90.29:0,90,1242	0/0:18,0:18:54.16:0,54,725	0/0:22,0:22:66.21:0,66,893	0/0:19,0:19:57.19:0,57,784	0/0:12,0:12:36.12:0,36,503
chr10	44522488	.	GA	G	3635.93	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=12.643;DP=608;FS=1.072;HRun=10;HaplotypeScore=76.1382;InbreedingCoeff=0.9625;MQ=82.01;MQ0=0;MQRankSum=-0.954;QD=17.48;ReadPosRankSum=0.131;VQSLOD=4.1914;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:81.18:0,81,874	1/1:1,0:9:14.26:42,14,0	0/0:26,1:26:15.26:0,15,306	0/0:18,0:17:34.45:0,34,304	0/0:30,0:32:87.02:0,87,921	0/0:25,0:25:72.19:0,72,796	0/0:24,1:25:34.07:0,34,582	1/1:5,30:35:89.92:772,90,0	0/0:13,0:13:33.07:0,33,355	1/1:3,29:32:56.79:719,57,0	1/1:5,22:27:59.96:521,60,0	0/0:18,0:18:42.11:0,42,463	0/0:16,1:17:13.11:0,13,372	0/0:14,0:14:36.10:0,36,398	1/1:0,8:8:21:182,21,0	1/1:3,16:19:47.98:417,48,0	1/1:6,0:36:64.06:190,64,0	1/1:4,26:30:11.62:559,12,0	0/0:12,0:13:30.08:0,30,329	0/0:24,0:24:72.19:0,72,795	0/0:14,0:14:4.33:0,4,273	0/0:22,0:23:69.01:0,69,737	0/0:25,0:25:69.17:0,69,743	0/0:16,1:17:25.08:0,25,505	1/1:1,11:12:26.99:234,27,0	0/0:22,0:22:57.15:0,57,630	0/0:25,0:25:72.15:0,72,764	0/0:15,0:15:44.91:0,45,478
chr10	44522839	.	TCCATTCACTCAC	T	1803.87	PASS	AB=1.000;AC=4;AF=0.071;AN=56;BaseQRankSum=6.991;DP=709;FS=1.919;HRun=0;HaplotypeScore=271.4155;InbreedingCoeff=0.4615;MQ=68.34;MQ0=6;MQRankSum=-0.097;QD=20.98;ReadPosRankSum=-5.317;VQSLOD=1.4363;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:37:99:0,99,4088	0/1:15,0:15:50.61:51,0,1718	0/0:23,0:17:38.48:0,38,1367	0/0:30,0:24:68.59:0,69,2002	0/0:25,0:25:75.26:0,75,3157	0/0:24,0:24:72.22:0,72,3613	0/0:29,0:29:87.26:0,87,3720	1/1:0,41:40:99:1795,117,0	0/0:26,0:26:78.26:0,78,4123	0/0:30,0:29:87.29:0,87,3991	0/0:28,0:28:84.29:0,84,4502	0/0:27,0:27:72.25:0,72,2872	0/0:22,0:22:66.21:0,66,2621	0/0:19,0:19:54.18:0,54,2134	0/0:24,0:24:72.22:0,72,3475	0/0:29,0:29:87.28:0,87,4068	0/1:30,0:30:74.37:74,0,2257	0/0:16,0:16:48.12:0,48,2357	0/0:15,0:15:45.15:0,45,1708	0/0:28,0:28:81.21:0,81,2598	0/0:27,0:27:69.19:0,69,2738	0/0:30,0:30:77.04:0,77,3074	0/0:20,0:20:52.98:0,53,1879	0/0:20,0:20:51.14:0,51,1332	0/0:21,0:21:63.20:0,63,3083	0/0:25,0:25:75.23:0,75,3079	0/0:28,0:28:75.21:0,75,3493	0/0:19,0:18:36.06:0,36,1294
chr10	44522851	.	C	CTCATTCAT	7825.17	PASS	AB=1.000;AC=32;AF=0.571;AN=56;BaseQRankSum=6.532;DP=738;FS=0.391;HRun=0;HaplotypeScore=199.1933;InbreedingCoeff=0.8141;MQ=62.60;MQ0=7;MQRankSum=-3.042;QD=17.20;ReadPosRankSum=-0.116;VQSLOD=4.1481;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,0:37:32.96:418,33,0	0/1:18,0:18:78.18:78,0,486	0/0:24,0:18:6.02:0,6,126	0/0:24,0:18:12.03:0,12,170	1/1:9,0:27:44.81:349,45,0	0/0:26,0:26:54.14:0,54,1224	0/0:27,0:27:42.14:0,42,1044	1/1:43,0:41:47.92:527,48,0	0/0:28,0:28:66.16:0,66,1437	0/0:29,0:28:48.14:0,48,1041	0/0:30,0:30:60.17:0,60,1372	1/1:15,15:32:27.09:1111,27,0	1/1:13,7:21:18.06:740,18,0	1/1:10,11:21:21.07:864,21,0	0/0:25,0:25:57.18:0,57,1284	0/0:28,0:28:42.14:0,42,1034	0/1:29,0:29:69.50:69,0,481	0/0:19,0:19:39.13:0,39,939	1/1:15,0:22:25.76:219,26,0	1/1:14,0:25:35.57:277,36,0	1/1:8,0:23:32.91:264,33,0	1/1:13,18:34:33.03:1221,33,0	1/1:13,11:25:15.05:588,15,0	1/1:13,8:23:6.02:216,6,0	0/0:23,0:23:51.18:0,51,1241	1/1:6,0:24:44.97:395,45,0	1/1:12,0:34:44.95:368,45,0	1/1:6,0:15:14.97:121,15,0
chr10	44522882	.	AC	A	347.93	PASS	AB=0.711;AC=2;AF=0.036;AN=56;BaseQRankSum=7.079;DP=655;FS=23.507;HRun=1;HaplotypeScore=116.1072;InbreedingCoeff=-0.0371;MQ=67.94;MQ0=0;MQRankSum=-6.098;QD=7.73;ReadPosRankSum=1.021;VQSLOD=-0.4117;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:37:89.80:0,90,941	0/1:11,6:17:99:172,0,404	0/0:21,0:21:60.18:0,60,914	0/0:15,0:12:36.02:0,36,478	0/0:26,0:26:74.95:0,75,885	0/0:23,0:23:69.21:0,69,1074	0/0:18,0:18:54.17:0,54,838	0/0:33,0:32:95.34:0,95,1434	0/0:27,0:27:81.26:0,81,1260	0/0:26,0:26:75.25:0,75,1172	0/0:29,0:29:87.27:0,87,1335	0/0:21,0:21:41.89:0,42,434	0/0:19,0:19:47.98:0,48,584	0/0:23,0:23:47.94:0,48,721	0/0:25,0:25:75.11:0,75,1135	0/0:20,0:20:57.17:0,57,864	0/1:15,13:28:99:264,0,564	0/0:18,0:18:54.16:0,54,835	0/0:22,0:22:65.94:0,66,858	0/0:18,0:18:36.02:0,36,585	0/0:26,0:27:68.32:0,68,797	0/0:27,0:27:52.96:0,53,585	0/0:17,0:17:38.91:0,39,439	0/0:23,0:23:48.13:0,48,715	0/0:22,0:22:66.21:0,66,1030	0/0:24,0:24:62.69:0,63,711	0/0:32,0:33:80.23:0,80,874	0/0:15,0:15:32.99:0,33,397
chr10	44522897	.	CTAGGATGTGT	C	1191.72	PASS	AB=0.748;AC=2;AF=0.036;AN=56;BaseQRankSum=6.276;DP=658;FS=9.459;HRun=0;HaplotypeScore=214.2766;InbreedingCoeff=-0.0371;MQ=75.69;MQ0=0;MQRankSum=-6.055;QD=25.91;ReadPosRankSum=2.646;VQSLOD=1.9223;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:90.31:0,90,4608	0/1:10,6:16:99:558,0,1170	0/0:24,0:24:72.16:0,72,3284	0/0:11,0:11:33.11:0,33,1480	0/0:28,0:28:84.29:0,84,4409	0/0:22,0:22:66.23:0,66,3344	0/0:13,0:13:39.13:0,39,1941	0/0:36,0:36:99:0,105,4921	0/0:24,0:24:69.24:0,69,3636	0/0:22,0:22:63.22:0,63,3253	0/0:27,0:27:81.26:0,81,3956	0/0:27,0:27:63.22:0,63,2974	0/0:22,0:22:54.18:0,54,2615	0/0:27,0:27:72.25:0,72,3797	0/0:25,0:25:75.26:0,75,3807	0/0:20,0:20:60.19:0,60,2827	0/1:21,9:30:99:722,0,2578	0/0:19,0:19:57.15:0,57,2789	0/0:25,0:25:75.26:0,75,3780	0/0:20,0:20:57.20:0,57,2956	0/0:29,0:29:75.26:0,75,3745	0/0:28,0:28:54.19:0,54,2857	0/0:22,0:22:51.17:0,51,2568	0/0:27,0:27:63.22:0,63,3183	0/0:19,0:19:57.20:0,57,3025	0/0:21,0:21:63.22:0,63,3365	0/0:28,0:28:66.23:0,66,3244	0/0:9,0:9:27.09:0,27,1456
chr10	44523079	.	TA	T	432.11	PASS	AB=0.731;AC=2;AF=0.036;AN=56;BaseQRankSum=6.091;DP=719;FS=5.088;HRun=7;HaplotypeScore=73.2958;InbreedingCoeff=-0.0392;MQ=85.00;MQ0=0;MQRankSum=-4.551;QD=4.70;ReadPosRankSum=3.210;VQSLOD=-0.1401;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,141,1746	0/1:7,7:14:99:147,0,190	0/0:25,0:25:53.38:0,53,630	0/0:20,0:20:42.03:0,42,479	0/0:33,0:33:90.29:0,90,1132	0/0:19,0:19:48.14:0,48,590	0/0:20,0:20:51.16:0,51,642	0/0:34,0:34:87.27:0,87,1083	0/0:22,0:22:66.19:0,66,815	0/0:30,0:30:81.26:0,81,1019	0/0:29,0:29:84.27:0,84,1051	0/0:27,0:27:75.21:0,75,927	0/0:26,0:26:75.24:0,75,942	0/0:20,0:20:51.13:0,51,613	0/0:26,0:26:75.23:0,75,931	0/0:18,0:18:48.15:0,48,604	0/1:58,20:78:99:374,0,1663	0/0:25,0:25:72.23:0,72,905	0/0:18,0:18:42.12:0,42,505	0/0:24,0:24:57.18:0,57,717	0/0:15,0:15:45.14:0,45,566	0/0:35,0:35:96.31:0,96,1208	0/0:19,0:19:45.13:0,45,554	0/0:21,0:21:57.17:0,57,704	0/0:20,0:20:57.18:0,57,717	0/0:27,0:27:69.21:0,69,856	0/0:23,0:23:57.18:0,57,716	0/0:3,0:3:9.03:0,9,113
chr10	44523327	.	A	AAC	221.56	PASS	AB=0.740;AC=2;AF=0.036;AN=56;BaseQRankSum=4.146;DP=551;FS=7.353;HRun=0;HaplotypeScore=74.3154;InbreedingCoeff=-0.0365;MQ=83.82;MQ0=0;MQRankSum=-4.156;QD=10.55;ReadPosRankSum=1.155;VQSLOD=2.6939;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:99:0,99,1509	0/1:4,4:8:30.86:216,0,31	0/0:26,0:26:72.23:0,72,1043	0/0:16,0:16:45.15:0,45,688	0/0:29,0:29:87.27:0,87,1308	0/0:11,0:11:33.11:0,33,504	0/0:20,0:20:60.19:0,60,895	0/0:29,0:29:84.29:0,84,1286	0/0:24,0:24:72.24:0,72,1100	0/0:17,0:17:51.17:0,51,781	0/0:19,0:19:51.17:0,51,778	0/0:20,0:20:60.19:0,60,898	0/0:21,0:21:60.19:0,60,897	0/0:22,0:22:66.22:0,66,1011	0/0:15,0:15:45.15:0,45,689	0/0:13,0:13:39.13:0,39,594	0/1:10,3:13:94.52:95,0,182	0/0:19,0:19:54.14:0,54,801	0/0:31,0:31:93.30:0,93,1394	0/0:21,0:21:60.19:0,60,899	0/0:30,0:30:90.31:0,90,1378	0/0:21,0:21:60.19:0,60,881	0/0:15,0:15:45.15:0,45,689	0/0:10,0:10:30.08:0,30,437	0/0:11,0:11:33.11:0,33,505	0/0:24,0:24:69.23:0,69,1035	0/0:24,0:24:69.23:0,69,1057	0/0:9,0:9:18.06:0,18,274
chr10	44523338	.	AAGGACACACTTGT	A	369	PASS	AB=0.708;AC=2;AF=0.036;AN=56;BaseQRankSum=3.345;DP=521;FS=4.862;HRun=0;HaplotypeScore=189.1657;InbreedingCoeff=-0.0372;MQ=89.83;MQ0=0;MQRankSum=-3.411;QD=23.06;ReadPosRankSum=0.798;VQSLOD=2.3877;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:87.30:0,87,5616	0/1:6,2:8:99:105,0,663	0/0:27,0:27:72.23:0,72,3915	0/0:16,0:16:42.14:0,42,2411	0/0:28,0:28:84.29:0,84,5392	0/0:13,0:13:39.13:0,39,2583	0/0:20,0:20:60.21:0,60,3750	0/0:26,0:26:78.27:0,78,4751	0/0:20,0:20:60.21:0,60,3804	0/0:17,0:17:45.15:0,45,2682	0/0:17,0:17:42.14:0,42,2709	0/0:19,0:19:57.20:0,57,3589	0/0:18,0:18:51.18:0,51,3105	0/0:18,0:18:54.19:0,54,3422	0/0:17,0:17:51.18:0,51,3226	0/0:11,0:11:33.11:0,33,2154	0/1:3,5:8:99:353,0,242	0/0:17,0:17:51.18:0,51,3410	0/0:26,0:26:78.26:0,78,4810	0/0:22,0:22:63.20:0,63,4004	0/0:30,0:30:90.31:0,90,5591	0/0:19,0:19:54.18:0,54,3366	0/0:16,0:16:45.15:0,45,2287	0/0:8,0:8:24.07:0,24,1357	0/0:14,0:14:42.14:0,42,2740	0/0:23,0:23:69.24:0,69,4452	0/0:25,0:25:75.26:0,75,4925	0/0:9,0:9:27.09:0,27,1796
chr10	44523352	.	AAAGTG	A	305.12	PASS	AB=0.685;AC=2;AF=0.036;AN=56;BaseQRankSum=4.488;DP=527;FS=7.020;HRun=0;HaplotypeScore=104.2789;InbreedingCoeff=-0.0373;MQ=89.46;MQ0=0;MQRankSum=-4.472;QD=17.95;ReadPosRankSum=0.749;VQSLOD=2.3571;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:81.28:0,81,2463	0/1:4,5:9:77.47:285,0,77	0/0:28,0:28:69.13:0,69,1829	0/0:15,0:15:39.13:0,39,1031	0/0:30,0:30:84.29:0,84,2578	0/0:14,0:14:36.12:0,36,1052	0/0:20,0:20:54.17:0,54,1592	0/0:33,0:33:96.33:0,96,2852	0/0:19,0:19:48.16:0,48,1467	0/0:15,0:15:45.15:0,45,1285	0/0:18,0:18:48.16:0,48,1414	0/0:18,0:18:48.16:0,48,1418	0/0:15,0:15:39.12:0,39,1080	0/0:17,0:17:51.18:0,51,1567	0/0:15,0:15:39.13:0,39,1117	0/0:9,0:9:24.08:0,24,738	0/1:5,3:8:40.21:109,0,40	0/0:21,0:21:57.20:0,57,1690	0/0:31,0:31:87.29:0,87,2518	0/0:22,0:22:63.22:0,63,1935	0/0:25,0:25:66.20:0,66,1956	0/0:19,0:19:54.19:0,54,1609	0/0:13,0:13:33.11:0,33,1012	0/0:7,0:7:21.07:0,21,645	0/0:17,0:17:51.18:0,51,1560	0/0:23,0:23:69.24:0,69,1973	0/0:28,0:28:84.29:0,84,2560	0/0:9,0:9:24.08:0,24,738
chr10	44523374	.	A	AG	317.66	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=4.328;DP=465;FS=9.159;HRun=1;HaplotypeScore=50.0872;InbreedingCoeff=0.9644;MQ=86.99;MQ0=0;MQRankSum=-5.366;QD=28.88;ReadPosRankSum=0.703;VQSLOD=2.3429;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:69.22:0,69,948	1/1:0,5:5:15.05:239,15,0	0/0:23,0:22:66.22:0,66,908	0/0:12,0:12:33.10:0,33,447	0/0:24,0:24:72.23:0,72,988	0/0:16,0:16:48.15:0,48,655	0/0:16,0:16:48.16:0,48,671	0/0:31,0:31:93.31:0,93,1299	0/0:17,0:17:51.16:0,51,698	0/0:15,0:15:42.13:0,42,573	0/0:22,0:22:66.22:0,66,923	0/0:13,0:13:39.13:0,39,546	0/0:12,0:12:33.11:0,33,462	0/0:17,0:17:51.17:0,51,711	0/0:5,0:5:15.05:0,15,210	0/0:9,0:9:27.09:0,27,378	1/1:0,6:6:12.04:191,12,0	0/0:17,0:17:51.15:0,51,692	0/0:33,0:33:92.08:0,92,1284	0/0:22,0:22:66.21:0,66,904	0/0:16,0:16:48.16:0,48,671	0/0:14,0:14:42.14:0,42,587	0/0:12,0:12:36.12:0,36,503	0/0:9,0:9:24.08:0,24,332	0/0:22,0:22:66.22:0,66,919	0/0:17,0:17:51.17:0,51,713	0/0:29,0:29:87.28:0,87,1197	0/0:8,0:8:24.08:0,24,336
chr10	44523400	.	A	AAACTCTTACAAAAG	1151.94	PASS	AB=0.667;AC=3;AF=0.054;AN=56;BaseQRankSum=4.784;DP=382;FS=9.320;HRun=0;HaplotypeScore=146.4872;InbreedingCoeff=0.5746;MQ=84.88;MQ0=0;MQRankSum=-3.607;QD=115.19;ReadPosRankSum=0.622;VQSLOD=3.0054;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:33.11:0,33,1346	0/1:3,2:6:99:802,0,187	0/0:17,0:16:42.12:0,42,1044	0/0:10,0:10:23.25:0,23,788	0/0:19,0:19:54.17:0,54,1961	0/0:18,0:18:54.18:0,54,2052	0/0:8,0:8:24.08:0,24,950	0/0:31,0:31:93.30:0,93,3124	0/0:13,0:13:39.12:0,39,1320	0/0:15,0:15:45.14:0,45,1578	0/0:18,0:18:54.19:0,54,2239	0/0:10,0:10:30.10:0,30,1142	0/0:7,0:7:18.06:0,18,652	0/0:12,0:12:36.12:0,36,1363	0/0:6,0:6:15.04:0,15,489	0/0:7,0:7:21.07:0,21,862	1/1:2,2:4:8.98:447,9,0	0/0:14,0:14:42.11:0,42,1632	0/0:26,0:25:69.18:0,69,2465	0/0:19,0:19:57.18:0,57,2250	0/0:10,0:10:30.10:0,30,942	0/0:12,0:12:33.11:0,33,1343	0/0:14,0:14:42.14:0,42,1743	0/0:9,0:9:24.08:0,24,975	0/0:22,0:22:66.23:0,66,2760	0/0:17,0:17:51.17:0,51,1802	0/0:21,0:21:60.21:0,60,2446	0/0:6,0:6:18.06:0,18,724
chr10	44523436	.	T	TAGGA	291.38	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=3.802;DP=334;FS=4.856;HRun=0;HaplotypeScore=66.5160;InbreedingCoeff=0.7316;MQ=71.64;MQ0=0;MQRankSum=-3.811;QD=58.28;ReadPosRankSum=1.578;VQSLOD=5.1817;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:33.06:0,33,611	1/1:0,4:4:12.04:313,12,0	0/0:7,0:7:18.06:0,18,350	0/0:3,0:3:9.03:0,9,189	0/0:19,0:19:57.20:0,57,1195	0/0:15,0:15:45.15:0,45,943	0/0:2,0:2:6.02:0,6,126	0/0:31,0:31:87.28:0,87,1730	0/0:10,0:10:30.09:0,30,593	0/0:13,0:13:39.13:0,39,768	0/0:16,0:16:48.14:0,48,931	0/0:11,0:11:33.10:0,33,648	0/0:5,0:5:12.04:0,12,252	0/0:10,0:10:30.10:0,30,629	0/0:6,0:6:18.06:0,18,378	0/0:6,0:6:18.06:0,18,378	1/1:0,1:1:3.01:81,3,0	0/0:22,0:22:66.15:0,66,1263	0/0:36,0:36:99:0,105,2119	0/0:18,0:18:54.19:0,54,1119	0/0:2,0:2:6.02:0,6,126	0/0:9,0:9:27.09:0,27,555	0/0:10,0:10:30.09:0,30,591	0/0:6,0:6:18.06:0,18,363	0/0:17,0:17:51.16:0,51,999	0/0:18,0:18:54.19:0,54,1123	0/0:20,0:20:60.19:0,60,1186	0/0:5,0:5:15.05:0,15,308
chr10	44524031	.	A	AAT	1556.66	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.149;DP=579;FS=0.679;HRun=0;HaplotypeScore=77.0009;InbreedingCoeff=0.9858;MQ=72.11;MQ0=0;MQRankSum=-1.987;QD=43.24;ReadPosRankSum=2.795;VQSLOD=5.4464;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:71.41:0,71,983	1/1:0,9:10:18.06:346,18,0	0/0:10,0:10:26.11:0,26,328	0/0:10,0:11:14.80:0,15,224	0/0:23,0:23:69.20:0,69,992	0/0:27,0:27:81.27:0,81,1190	0/0:22,0:22:66.21:0,66,951	0/0:38,0:38:99:0,114,1619	0/0:21,0:21:63.21:0,63,933	0/0:22,0:22:63.18:0,63,869	0/0:17,0:17:48.16:0,48,718	0/0:16,0:16:48.16:0,48,717	0/0:20,0:20:60.19:0,60,872	0/0:25,0:25:75.19:0,75,1036	0/0:28,0:28:84.10:0,84,1141	0/0:18,0:18:51.16:0,51,738	1/1:0,24:26:69.24:1330,69,0	0/0:22,0:22:66.14:0,66,919	0/0:17,0:17:51.13:0,51,721	0/0:20,0:20:60.20:0,60,892	0/0:9,0:9:27.07:0,27,359	0/0:19,0:19:54.18:0,54,808	0/0:25,0:25:75.20:0,75,1048	0/0:11,0:10:30.09:0,30,430	0/0:29,0:29:87.28:0,87,1274	0/0:24,0:24:69.21:0,69,984	0/0:26,0:26:78.20:0,78,1086	0/0:19,0:19:57.19:0,57,841
chr10	44524261	.	TAA	T	103.43	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=4.532;DP=684;FS=0.000;HRun=2;HaplotypeScore=89.5732;InbreedingCoeff=0.9257;MQ=72.38;MQ0=0;MQRankSum=-3.175;QD=10.34;ReadPosRankSum=1.000;VQSLOD=0.5184;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,135,2536	1/1:0,3:3:6.02:76,6,0	0/0:28,0:26:59.91:0,60,1333	0/0:21,0:16:39.13:0,39,791	0/0:30,0:30:87:0,87,1436	0/0:25,0:25:75.17:0,75,1443	0/0:21,0:21:63.20:0,63,1233	0/0:53,0:53:99:0,160,3090	0/0:18,0:18:54.17:0,54,1028	0/0:18,0:18:54.18:0,54,1054	0/0:24,0:24:72.11:0,72,1279	0/0:27,0:27:81.26:0,81,1538	0/0:19,0:19:57.20:0,57,1127	0/0:16,0:16:48.15:0,48,939	0/0:25,0:25:75.21:0,75,1354	0/0:24,0:24:72.25:0,72,1446	1/1:1,6:7:12.03:133,12,0	0/0:20,0:21:60.16:0,60,1122	0/0:15,0:15:45.15:0,45,881	0/0:24,0:24:72.25:0,72,1441	0/0:19,0:19:57.19:0,57,1112	0/0:22,0:22:66.18:0,66,1233	0/0:26,0:26:78.06:0,78,1310	0/0:23,0:23:66.18:0,66,1230	0/0:30,0:30:89.97:0,90,1542	0/0:24,0:24:72.25:0,72,1443	0/0:39,0:38:99:0,117,2252	0/0:37,0:37:99:0,108,2120
chr10	44524288	.	ATG	A	139.36	PASS	AB=0.755;AC=2;AF=0.036;AN=56;BaseQRankSum=4.935;DP=677;FS=1.284;HRun=0;HaplotypeScore=89.7608;InbreedingCoeff=-0.0370;MQ=88.31;MQ0=0;MQRankSum=-3.911;QD=5.57;ReadPosRankSum=-0.735;VQSLOD=2.8506;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,135,2295	0/1:4,1:6:30.83:31,0,95	0/0:34,0:34:74.60:0,75,1336	0/0:24,0:24:57.19:0,57,921	0/0:28,0:28:69.24:0,69,1193	0/0:24,0:24:63.22:0,63,1089	0/0:16,0:16:39.13:0,39,675	0/0:41,0:41:93.28:0,93,1492	0/0:23,0:23:63.19:0,63,1060	0/0:27,0:27:81.28:0,81,1402	0/0:21,0:21:60.21:0,60,1034	0/0:20,0:20:54.17:0,54,908	0/0:14,0:14:39.13:0,39,672	0/0:16,0:16:42.13:0,42,693	0/0:22,0:22:57.20:0,57,987	0/0:21,0:21:57.16:0,57,928	0/1:13,6:19:99:197,0,271	0/0:20,0:20:54.18:0,54,907	0/0:19,0:19:42.14:0,42,700	0/0:28,0:28:81.28:0,81,1401	0/0:20,0:20:57.20:0,57,987	0/0:20,0:20:60.20:0,60,1003	0/0:23,0:23:66.23:0,66,1140	0/0:23,0:23:66.20:0,66,1101	0/0:28,0:28:75.26:0,75,1280	0/0:26,0:26:78.27:0,78,1351	0/0:34,0:33:96.31:0,96,1602	0/0:29,0:29:75.26:0,75,1273
chr10	44546298	.	AAC	A	944.59	PASS	AB=0.642;AC=18;AF=0.429;AN=42;BaseQRankSum=-1.793;DP=247;FS=9.052;HRun=0;HaplotypeScore=56.7202;InbreedingCoeff=0.5274;MQ=49.32;MQ0=9;MQRankSum=-0.467;QD=11.96;ReadPosRankSum=2.707;VQSLOD=1.7981;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:5:2.49:0,2,6	0/0:7,0:7:3:0,3,26	0/0:35,0:15:37.31:0,37,456	0/0:25,0:10:20.53:0,21,195	1/1:4,9:12:4.56:39,5,0	0/0:9,0:8:2.81:0,3,46	0/0:14,0:12:13.60:0,14,198	0/1:2,1:2:28.52:30,0,29	0/0:9,0:8:6.01:0,6,89	1/1:5,9:14:26.40:346,26,0	./.	./.	1/1:2,0:2:2.98:22,3,0	1/1:6,0:4:3.01:36,3,0	./.	0/0:2,0:2:2.50:0,2,9	0/0:8,0:8:8.96:0,9,76	0/0:4,0:3:2.51:0,3,8	1/1:2,3:4:9.01:90,9,0	./.	1/1:11,0:7:6.04:87,6,0	0/1:1,7:8:0:0,0,0	./.	./.	./.	1/1:5,4:9:17.59:201,18,0	0/0:1,2:1:2.80:0,3,13	1/1:2,6:8:23.42:238,23,0
chr10	44546314	.	C	CAT	329.13	PASS	AB=1.000;AC=16;AF=0.348;AN=46;BaseQRankSum=0.166;DP=279;FS=30.058;HRun=0;HaplotypeScore=68.9750;InbreedingCoeff=0.3574;MQ=36.48;MQ0=16;MQRankSum=-1.059;QD=3.20;ReadPosRankSum=1.321;VQSLOD=0.1049;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:7:5.19:0,5,20	0/0:7,0:7:5.92:0,6,41	0/0:31,0:12:38.94:0,39,512	0/0:24,0:9:27.02:0,27,312	0/1:14,0:13:3.25:9,0,3	0/1:7,0:6:9.40:9,0,38	0/0:20,0:15:17.98:0,18,227	0/1:3,0:2:4.80:5,0,13	0/0:12,0:9:5.98:0,6,88	1/1:16,0:16:20.39:155,20,0	0/0:4,0:4:0:0,0,0	./.	1/1:3,0:2:2.99:23,3,0	1/1:7,0:5:2.74:12,3,0	./.	0/0:3,0:2:2.37:0,2,8	0/0:8,0:8:11.82:0,12,88	0/0:7,0:6:11.72:0,12,60	1/1:8,0:3:8.80:70,9,0	./.	0/1:16,0:11:19.10:19,0,40	0/1:10,0:10:0:0,0,0	./.	0/0:9,4:10:2.98:0,3,22	./.	0/1:10,0:10:3.54:62,0,4	0/0:5,0:3:5.62:0,6,27	1/1:9,0:9:19.39:106,19,0
chr10	44546379	.	A	ACG	101.99	PASS	AB=1.000;AC=12;AF=0.333;AN=36;BaseQRankSum=3.225;DP=242;FS=1.475;HRun=0;HaplotypeScore=43.0357;InbreedingCoeff=0.3321;MQ=32.07;MQ0=21;MQRankSum=1.223;QD=1.03;ReadPosRankSum=1.183;VQSLOD=1.2639;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/1:12,0:2:0:0,0,0	0/0:10,0:2:2.98:0,3,28	0/0:15,0:11:2.60:0,3,10	0/0:20,0:20:20.91:0,21,249	0/0:21,0:19:36.09:0,36,446	./.	0/0:6,0:6:9.03:0,9,120	0/0:8,0:6:4.08:0,4,38	./.	./.	1/1:4,2:4:1.31:4,1,0	0/0:8,1:9:0:0,0,0	./.	./.	./.	0/0:7,0:6:5.24:0,5,25	0/1:13,0:8:1.75:2,0,61	./.	0/1:29,0:17:7.16:7,0,75	1/1:6,0:7:3.01:51,3,0	./.	1/1:18,1:16:11.69:122,12,0	1/1:6,0:5:2.98:21,3,0	0/1:7,0:6:0.72:1,0,21	0/0:9,0:8:11.59:0,12,66	0/0:4,0:3:2.99:0,3,23
chr10	44546385	.	G	GCA	262.42	PASS	AB=0.963;AC=17;AF=0.472;AN=36;BaseQRankSum=3.945;DP=276;FS=6.289;HRun=0;HaplotypeScore=42.2499;InbreedingCoeff=0.3400;MQ=31.52;MQ0=27;MQRankSum=-1.900;QD=2.08;ReadPosRankSum=-1.360;VQSLOD=0.5072;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:13,0:2:4.91:0,5,21	0/0:10,0:2:2.98:0,3,31	1/1:12,2:11:2.87:15,3,0	0/0:19,0:21:17.93:0,18,214	0/0:28,0:23:39:0,39,417	./.	0/0:8,0:7:9.03:0,9,105	0/1:9,0:7:30.44:30,0,33	./.	0/0:11,0:9:0:0,0,0	1/1:8,0:6:1.97:5,2,0	./.	./.	./.	./.	0/0:7,0:5:1.65:0,2,8	0/1:14,2:8:20.84:68,0,21	./.	1/1:27,0:16:3.01:46,3,0	1/1:7,0:7:3.01:32,3,0	./.	1/1:21,0:17:8.38:97,8,0	0/1:6,0:5:0:0,0,0	1/1:8,1:8:11.82:82,12,0	1/1:9,0:8:0.47:1,0,0	0/0:5,0:4:0:0,0,0
chr10	44546406	.	G	GAC	516.40	PASS	AB=1.000;AC=23;AF=0.548;AN=42;BaseQRankSum=5.084;DP=311;FS=11.052;HRun=0;HaplotypeScore=45.6305;InbreedingCoeff=0.5276;MQ=32.10;MQ0=26;MQRankSum=-1.316;QD=3.54;ReadPosRankSum=-0.400;VQSLOD=-0.1564;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:13,0:2:3:0,3,34	0/0:10,0:2:2.68:0,3,11	1/1:10,4:11:3.01:49,3,0	0/0:24,0:24:27.02:0,27,316	0/0:37,0:30:60.11:0,60,707	0/0:10,0:7:2.67:0,3,8	0/0:9,0:6:9.03:0,9,106	1/1:13,0:11:9.13:81,9,0	./.	0/0:9,0:9:0:0,0,0	1/1:7,0:8:2.88:9,3,0	1/1:16,0:13:3:25,3,0	./.	0/0:5,0:5:0.47:0,0,1	./.	1/1:5,0:3:2.92:17,3,0	1/1:14,2:8:12.54:98,13,0	0/0:3,2:5:0:0,0,0	1/1:22,0:10:6.02:91,6,0	./.	./.	1/1:23,0:20:10.22:79,10,0	1/1:8,0:7:3.01:49,3,0	1/1:6,2:8:10.55:64,11,0	0/1:6,0:6:0:0,0,0	1/1:3,1:4:6.49:84,6,0
chr10	44546418	.	CAG	C	263.41	PASS	AB=1.000;AC=20;AF=0.455;AN=44;BaseQRankSum=2.849;DP=310;FS=25.795;HRun=0;HaplotypeScore=44.3180;InbreedingCoeff=0.2604;MQ=32.99;MQ0=27;MQRankSum=-3.381;QD=1.92;ReadPosRankSum=1.768;VQSLOD=0.3035;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:7,0:1:3.01:0,3,53	0/0:6,0:1:2.68:0,3,11	1/1:14,0:10:2.88:15,3,0	0/0:25,0:23:29.97:0,30,412	0/0:38,0:31:62.91:0,63,979	1/1:14,0:8:3.47:105,3,0	0/0:12,0:9:14.91:0,15,162	1/1:13,3:12:6.76:130,7,0	./.	0/1:10,0:8:0:0,0,0	1/1:9,0:7:1.63:11,2,0	0/0:18,1:15:14.99:0,15,146	./.	1/1:5,1:6:2.80:13,3,0	./.	1/1:4,1:4:2.96:19,3,0	0/1:14,0:8:27.55:28,0,38	0/0:6,0:6:2.94:0,3,25	0/1:20,0:12:11.82:12,0,35	0/0:8,0:8:3:0,3,25	./.	0/0:19,0:15:10.85:0,11,143	1/1:7,3:8:2.60:10,3,0	0/1:11,0:10:42.45:49,0,42	0/1:5,0:3:0:0,0,0	0/1:3,0:3:2.83:3,0,34
chr10	44546429	.	ACG	A	245.22	PASS	AB=0.976;AC=23;AF=0.500;AN=46;BaseQRankSum=4.077;DP=284;FS=18.294;HRun=0;HaplotypeScore=49.7390;InbreedingCoeff=0.2989;MQ=34.59;MQ0=29;MQRankSum=-2.473;QD=1.82;ReadPosRankSum=0.089;VQSLOD=-0.0697;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:10:2.50:0,2,9	0/1:6,0:2:0:0,0,0	./.	./.	1/1:12,0:8:2.88:15,3,0	0/0:25,0:23:3.85:0,4,282	0/0:35,0:30:48.91:0,49,837	0/1:16,0:9:34.43:60,0,34	0/0:11,0:8:9.54:0,10,131	1/1:12,3:12:17.44:146,17,0	./.	0/0:10,0:8:5.50:0,6,41	1/1:7,0:6:5.58:22,6,0	0/0:15,1:13:15.05:0,15,269	./.	0/1:4,1:5:0:0,0,0	1/1:4,0:4:0.47:1,0,0	1/1:4,1:4:2.98:21,3,0	1/1:9,0:7:2.02:44,2,0	1/1:6,0:6:3.93:11,4,0	0/1:20,0:13:6.14:6,0,9	0/0:7,0:6:3.01:0,3,51	./.	0/0:20,0:16:17.02:0,17,232	1/1:6,3:7:2.68:11,3,0	0/1:11,0:9:30.58:35,0,31	0/1:5,0:3:0:0,0,0	0/1:5,0:5:4.04:4,0,40
chr10	44546431	.	G	GCA	341.27	PASS	AB=1.000;AC=25;AF=0.781;AN=32;BaseQRankSum=4.959;DP=284;FS=18.493;HRun=0;HaplotypeScore=50.8212;InbreedingCoeff=0.4365;MQ=34.47;MQ0=29;MQRankSum=-1.824;QD=2.15;ReadPosRankSum=-2.493;VQSLOD=-0.6015;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:11,1:10:2.68:11,3,0	./.	./.	./.	./.	0/0:21,0:21:21.90:0,22,194	0/0:28,0:30:44.87:0,45,531	1/1:19,0:12:7.95:39,8,0	0/0:10,0:7:5.85:0,6,72	1/1:15,0:12:0.89:3,1,0	./.	1/1:10,1:9:5.40:24,5,0	1/1:5,1:6:5.91:36,6,0	1/1:14,1:12:2.44:20,2,0	./.	./.	./.	./.	1/1:9,1:8:8.92:82,9,0	1/1:5,1:6:5.74:50,6,0	1/1:21,1:14:7.17:47,7,0	1/1:8,0:7:2.37:8,2,0	./.	0/1:19,0:15:29.53:30,0,43	./.	1/1:10,1:9:9.07:75,9,0	./.	1/1:5,0:5:7.10:38,7,0
chr10	44546448	.	CAG	C	593.48	PASS	AB=0.937;AC=23;AF=0.548;AN=42;BaseQRankSum=3.610;DP=286;FS=14.097;HRun=0;HaplotypeScore=48.2083;InbreedingCoeff=0.0973;MQ=35.11;MQ0=27;MQRankSum=-2.499;QD=3.00;ReadPosRankSum=-1.675;VQSLOD=-0.0615;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:16,0:12:4.84:6,0,5	./.	./.	./.	1/1:10,1:6:2.68:11,3,0	0/1:20,0:18:16.96:17,0,191	0/0:31,0:29:50.50:0,50,672	0/1:13,0:6:0.11:0,0,9	0/0:10,0:7:11.89:0,12,147	1/1:18,0:15:13.41:175,13,0	./.	0/0:9,0:8:5.09:0,5,19	0/1:5,0:5:1.02:11,0,1	0/0:12,0:9:14.13:0,14,77	./.	./.	0/1:4,0:4:0:0,0,0	1/1:4,1:5:2.92:17,3,0	0/1:10,1:7:16.92:39,0,17	1/1:7,2:9:6:91,6,0	0/1:22,3:16:10.31:100,0,10	0/1:7,1:7:5.49:5,0,8	./.	0/1:18,0:14:16.42:16,0,55	1/1:9,0:8:3:25,3,0	1/1:11,3:11:10.60:137,11,0	0/1:5,1:4:0:0,0,0	0/1:4,2:6:10.60:71,0,11
chr10	44546450	.	GAC	G	428.44	PASS	AB=0.978;AC=20;AF=0.526;AN=38;BaseQRankSum=2.879;DP=283;FS=0.000;HRun=0;HaplotypeScore=49.2115;InbreedingCoeff=0.1994;MQ=35.37;MQ0=27;MQRankSum=-0.130;QD=2.71;ReadPosRankSum=0.477;VQSLOD=1.3443;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:10:4.83:41,5,0	./.	./.	./.	1/1:9,1:5:3.01:36,3,0	0/0:19,0:17:14.61:0,15,192	0/0:30,0:28:33.09:0,33,473	0/0:12,0:5:11.57:0,12,64	0/0:10,0:7:12.03:0,12,164	1/1:12,5:14:18.05:206,18,0	./.	1/1:8,1:8:1.95:5,2,0	0/0:3,1:4:2.01:0,2,6	0/0:12,0:9:8.76:0,9,40	./.	./.	./.	1/1:5,1:6:3.01:32,3,0	0/1:11,0:7:11.82:12,0,36	0/1:8,0:9:2.80:34,0,3	0/1:28,0:20:37.39:37,0,37	1/1:7,1:7:0.33:32,0,0	./.	1/1:15,3:14:2.45:76,2,0	./.	0/1:15,0:12:29.27:29,0,35	0/1:6,0:4:0:0,0,0	0/1:6,0:6:15.51:16,0,29
chr10	44546506	.	T	TAC	3035.45	PASS	AB=0.781;AC=37;AF=0.712;AN=52;BaseQRankSum=0.836;DP=456;FS=17.191;HRun=0;HaplotypeScore=71.5734;InbreedingCoeff=0.3872;MQ=44.56;MQ0=25;MQRankSum=0.754;QD=8.34;ReadPosRankSum=2.238;VQSLOD=1.4582;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:9,18:24:12.95:157,13,0	./.	0/0:10,0:2:2.68:0,3,11	0/0:13,0:4:5.69:0,6,46	1/1:4,10:13:3.01:48,3,0	0/0:16,0:13:20.84:0,21,236	0/0:20,0:18:39.12:0,39,459	1/1:11,0:7:3.44:21,3,0	0/0:15,0:13:27:0,27,268	1/1:23,2:24:51.24:648,51,0	1/1:6,14:18:5.86:95,6,0	0/1:14,1:12:14.76:41,0,15	./.	1/1:26,0:25:19.05:133,19,0	0/1:1,9:11:0:0,0,0	1/1:2,6:7:6.02:95,6,0	1/1:13,0:13:2.21:14,2,0	1/1:3,19:20:23.83:379,24,0	0/1:15,3:11:49.63:75,0,50	0/1:5,11:16:29.35:42,0,29	1/1:12,20:28:18.06:285,18,0	1/1:10,0:9:16.54:148,17,0	1/1:9,2:11:15:166,15,0	1/1:21,0:21:19.31:131,19,0	1/1:3,14:17:3.01:47,3,0	0/1:20,0:19:35.96:303,0,36	1/1:3,10:11:9.03:143,9,0	1/1:9,0:9:17.64:229,18,0
chr10	44546604	.	AAGC	A	1169.90	PASS	AB=0.743;AC=3;AF=0.054;AN=56;BaseQRankSum=7.633;DP=633;FS=0.000;HRun=0;HaplotypeScore=100.5102;InbreedingCoeff=-0.0602;MQ=71.02;MQ0=0;MQRankSum=-1.836;QD=18.87;ReadPosRankSum=1.799;VQSLOD=3.4949;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,141,2933	0/1:7,9:16:99:432,0,218	0/0:16,0:15:6.65:0,7,522	0/1:16,0:16:55.32:55,0,190	0/0:40,0:39:99:0,102,2136	0/0:22,0:22:66.23:0,66,1419	0/0:19,0:19:57.18:0,57,1147	0/0:31,0:31:90.29:0,90,1899	0/0:11,0:10:30.10:0,30,596	0/0:32,0:32:93.30:0,93,1967	0/0:13,0:13:39.13:0,39,855	0/0:19,0:19:51.18:0,51,1120	0/0:13,0:13:36.12:0,36,742	0/0:21,0:21:54.17:0,54,1132	0/0:22,0:22:63.22:0,63,1322	0/0:18,0:18:48.16:0,48,1026	0/1:9,21:30:99:783,0,253	0/0:23,0:23:66.23:0,66,1439	0/0:22,0:22:66.22:0,66,1352	0/0:24,0:24:69.22:0,69,1459	0/0:17,0:17:51.18:0,51,1103	0/0:21,0:21:60.10:0,60,1170	0/0:12,0:12:36.11:0,36,712	0/0:27,0:27:63.16:0,63,1194	0/0:24,0:24:72.25:0,72,1546	0/0:28,0:28:81.28:0,81,1753	0/0:21,0:21:63.22:0,63,1352	0/0:28,0:28:84.29:0,84,1809
chr10	44546931	.	T	TTA	1986.03	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=6.138;DP=515;FS=0.560;HRun=0;HaplotypeScore=72.2417;InbreedingCoeff=0.9226;MQ=68.15;MQ0=0;MQRankSum=-4.726;QD=28.78;ReadPosRankSum=-1.710;VQSLOD=4.3482;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:63.13:0,63,756	1/1:12,0:12:6.71:258,7,0	0/0:5,0:5:6.28:0,6,44	0/0:11,0:11:20.65:0,21,236	0/0:43,0:43:99:0,105,1299	0/0:19,0:19:51.16:0,51,638	0/0:12,0:12:27.09:0,27,344	1/1:12,18:30:69.23:1130,69,0	0/0:12,0:12:33.11:0,33,420	0/0:19,0:19:54.17:0,54,687	0/0:23,0:23:63.20:0,63,802	0/0:17,0:17:42.13:0,42,535	0/0:22,0:22:54.17:0,54,688	0/0:10,0:10:24.08:0,24,306	0/0:16,0:16:42.11:0,42,508	0/0:12,0:12:30.10:0,30,382	1/1:27,0:27:52.16:733,52,0	0/0:15,0:15:39.12:0,39,496	0/0:21,0:21:45.14:0,45,570	0/0:29,0:29:69.22:0,69,879	0/0:11,0:11:24.07:0,24,293	0/0:9,0:9:18.06:0,18,229	0/0:11,0:11:30.10:0,30,382	0/0:9,0:9:18.06:0,18,229	0/0:24,0:24:57.15:0,57,700	0/0:23,0:23:66.21:0,66,830	0/0:37,0:37:93.30:0,93,1184	0/0:13,0:13:39.12:0,39,497
chr10	44546933	.	A	ACG	286.93	PASS	AB=0.872;AC=3;AF=0.054;AN=56;BaseQRankSum=9.083;DP=510;FS=0.764;HRun=0;HaplotypeScore=77.8673;InbreedingCoeff=-0.0573;MQ=68.20;MQ0=0;MQRankSum=-7.671;QD=4.10;ReadPosRankSum=-0.717;VQSLOD=2.3131;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:66.23:0,66,1071	0/1:8,4:12:28.84:154,0,29	0/0:5,0:5:11.53:0,12,122	0/0:11,0:11:23.91:0,24,330	0/0:42,0:42:99:0,126,2010	0/0:20,0:20:60.19:0,60,940	0/0:11,0:11:33.11:0,33,529	0/1:32,0:32:45.45:45,0,313	0/0:11,0:11:33.11:0,33,538	0/0:19,0:19:57.19:0,57,927	0/0:23,0:23:66.23:0,66,1074	0/0:16,0:16:48.16:0,48,776	0/0:22,0:22:66.21:0,66,1042	0/0:10,0:10:30.10:0,30,481	0/0:16,0:16:48.16:0,48,777	0/0:11,0:11:33.11:0,33,535	0/1:22,4:26:52.05:188,0,52	0/0:15,0:15:45.15:0,45,723	0/0:20,0:20:60.20:0,60,969	0/0:27,0:27:81.26:0,81,1282	0/0:10,0:10:30.10:0,30,482	0/0:9,0:9:27.09:0,27,432	0/0:12,0:12:33.11:0,33,536	0/0:9,0:9:27.09:0,27,426	0/0:23,0:23:69.21:0,69,1088	0/0:23,0:23:69.24:0,69,1124	0/0:38,0:38:99:0,108,1688	0/0:14,0:14:39.13:0,39,636
chr10	44546940	.	T	TGC	259.06	PASS	AB=0.872;AC=3;AF=0.054;AN=56;BaseQRankSum=8.704;DP=499;FS=0.807;HRun=0;HaplotypeScore=78.9133;InbreedingCoeff=-0.0564;MQ=68.39;MQ0=0;MQRankSum=-6.744;QD=3.87;ReadPosRankSum=1.439;VQSLOD=2.1913;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:63.22:0,63,1027	0/1:8,4:12:27.28:157,0,27	0/0:5,0:5:11.91:0,12,169	0/0:11,0:11:30.08:0,30,452	0/0:43,0:43:99:0,126,2004	0/0:20,0:20:60.19:0,60,942	0/0:12,0:12:36.12:0,36,580	0/1:29,0:29:27.27:27,0,323	0/0:11,0:11:33.11:0,33,538	0/0:21,0:21:63.21:0,63,1004	0/0:26,0:26:78.24:0,78,1216	0/0:18,0:18:48.14:0,48,753	0/0:20,0:20:60.20:0,60,973	0/0:9,0:9:27.09:0,27,436	0/0:15,0:15:45.14:0,45,710	0/0:11,0:11:33.11:0,33,536	0/1:22,4:26:31.77:175,0,32	0/0:14,0:14:39.13:0,39,636	0/0:15,0:15:45.15:0,45,734	0/0:25,0:25:75.24:0,75,1197	0/0:9,0:9:27.07:0,27,415	0/0:8,0:8:24.07:0,24,366	0/0:14,0:14:42.13:0,42,651	0/0:7,0:7:21.06:0,21,319	0/0:24,0:24:72.25:0,72,1162	0/0:22,0:22:66.23:0,66,1077	0/0:35,0:35:99:0,105,1699	0/0:16,0:16:48.16:0,48,773
chr10	44546942	.	T	TA	380.93	PASS	AB=0.770;AC=3;AF=0.054;AN=56;BaseQRankSum=9.390;DP=495;FS=2.054;HRun=1;HaplotypeScore=63.6302;InbreedingCoeff=0.2957;MQ=68.57;MQ0=0;MQRankSum=-3.504;QD=6.05;ReadPosRankSum=-0.451;VQSLOD=0.3450;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:63.15:0,63,840	0/1:6,5:11:4.20:90,0,4	0/0:5,0:5:12.01:0,12,142	0/0:12,0:11:24.76:0,25,365	0/0:41,0:41:99:0,123,1672	0/0:21,0:21:57.18:0,57,777	0/0:13,0:13:39.11:0,39,520	0/1:29,0:29:99:110,0,232	0/0:11,0:11:33.11:0,33,461	0/0:22,0:22:66.21:0,66,902	0/0:26,0:26:78.25:0,78,1064	0/0:18,0:18:54.18:0,54,744	0/0:20,0:20:60.20:0,60,834	0/0:9,0:9:27.08:0,27,361	0/0:14,0:14:42.14:0,42,587	0/0:11,0:11:33.11:0,33,459	0/1:9,14:23:2.43:281,0,2	0/0:15,0:15:39.13:0,39,545	0/0:16,0:16:48.16:0,48,671	0/0:25,0:25:75.25:0,75,1044	0/0:8,0:8:24.07:0,24,319	0/0:7,0:7:21.07:0,21,291	0/0:13,0:13:39.13:0,39,538	0/0:6,0:6:18.06:0,18,251	0/0:24,0:24:72.22:0,72,976	0/0:22,0:22:66.22:0,66,910	0/0:36,0:36:99:0,105,1453	0/0:16,0:16:48.13:0,48,645
chr10	44546943	.	T	TA	294.09	PASS	AB=0.660;AC=2;AF=0.036;AN=56;BaseQRankSum=7.442;DP=495;FS=1.873;HRun=0;HaplotypeScore=64.3804;InbreedingCoeff=-0.0397;MQ=67.71;MQ0=0;MQRankSum=-1.548;QD=8.40;ReadPosRankSum=1.622;VQSLOD=3.0280;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:60.16:0,60,817	0/1:6,5:11:69.11:84,0,69	0/0:3,0:4:9.03:0,9,122	0/0:11,0:11:28.55:0,29,354	0/0:40,0:40:99:0,117,1636	0/0:20,0:20:60.18:0,60,809	0/0:14,0:14:39.12:0,39,529	0/0:28,0:28:83.48:0,83,763	0/0:11,0:11:33.11:0,33,461	0/0:22,0:22:66.20:0,66,904	0/0:27,0:27:78.24:0,78,1072	0/0:19,0:19:54.18:0,54,754	0/0:20,0:20:60.20:0,60,839	0/0:9,0:9:27.08:0,27,363	0/0:14,0:14:42.14:0,42,587	0/0:11,0:11:33.11:0,33,462	0/1:10,14:24:36.95:299,0,37	0/0:16,0:16:42.13:0,42,570	0/0:16,0:16:48.16:0,48,671	0/0:25,0:25:75.25:0,75,1049	0/0:8,0:8:21.07:0,21,294	0/0:7,0:7:21.07:0,21,294	0/0:13,0:13:39.13:0,39,545	0/0:7,0:7:18.06:0,18,251	0/0:23,0:23:69.23:0,69,965	0/0:22,0:22:66.21:0,66,909	0/0:36,0:36:99:0,105,1464	0/0:16,0:16:48.16:0,48,668
chr10	44546955	.	T	TA	647.12	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-1.359;DP=495;FS=15.725;HRun=6;HaplotypeScore=62.8778;InbreedingCoeff=0.8274;MQ=65.70;MQ0=0;MQRankSum=-3.633;QD=28.14;ReadPosRankSum=-3.827;VQSLOD=1.2841;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:48.08:0,48,481	0/0:12,0:12:24.04:0,24,238	0/0:2,0:2:3.01:0,3,30	0/0:11,0:10:17.22:0,17,202	0/0:37,0:37:99:0,102,1031	0/0:16,0:16:42.09:0,42,429	0/0:13,0:13:39.09:0,39,398	1/1:4,19:23:63.10:742,63,0	0/0:9,0:9:24.04:0,24,238	0/0:25,0:25:63.14:0,63,642	0/0:30,0:30:78.16:0,78,785	0/0:19,0:19:54.12:0,54,551	0/0:18,0:18:54.11:0,54,543	0/0:13,0:13:39.01:0,39,373	0/0:15,0:15:42.10:0,42,429	0/0:12,0:12:33.08:0,33,337	0/0:26,0:26:72.14:0,72,726	0/0:19,0:19:51.08:0,51,511	0/0:19,0:19:51.08:0,51,504	0/0:30,0:30:81.14:0,81,811	0/0:7,0:7:18.04:0,18,184	0/0:8,0:8:24.05:0,24,245	0/0:12,0:12:33.07:0,33,337	0/0:7,0:7:18.04:0,18,183	0/0:21,0:21:60.14:0,60,612	0/0:20,0:20:51.11:0,51,515	0/0:37,0:37:99:0,105,1064	0/0:16,0:16:48.11:0,48,490
chr10	44547025	.	G	GAA	470.06	PASS	AB=0.721;AC=2;AF=0.036;AN=56;BaseQRankSum=5.887;DP=481;FS=3.816;HRun=6;HaplotypeScore=69.9684;InbreedingCoeff=-0.0377;MQ=80.55;MQ0=0;MQRankSum=-6.233;QD=11.19;ReadPosRankSum=-0.500;VQSLOD=-0.4186;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:48.12:0,48,572	0/1:5,7:12:33.37:316,0,33	0/0:18,0:16:35.98:0,36,393	0/0:14,0:14:24.32:0,24,210	0/0:23,0:23:54.15:0,54,653	0/0:19,0:19:57.15:0,57,671	0/0:13,0:13:36.10:0,36,427	0/0:26,0:26:72.22:0,72,878	0/0:10,0:10:27.08:0,27,328	0/0:22,0:22:54.15:0,54,658	0/0:22,0:22:66.21:0,66,804	0/0:14,0:14:39.10:0,39,461	0/0:17,0:17:48.15:0,48,586	0/0:8,0:8:24.08:0,24,293	0/0:20,0:20:51.15:0,51,620	0/0:11,0:11:30.09:0,30,366	0/1:23,6:30:99:243,0,223	0/0:28,0:28:75.19:0,75,896	0/0:21,0:21:60.17:0,60,718	0/0:24,0:24:66.19:0,66,791	0/0:7,0:7:18.05:0,18,220	0/0:11,0:11:30.06:0,30,351	0/0:20,0:20:51.16:0,51,622	0/0:6,0:6:15.05:0,15,183	0/0:14,0:14:39.06:0,39,427	0/0:17,0:17:48.15:0,48,584	0/0:20,0:20:57.17:0,57,693	0/0:16,0:16:48.15:0,48,585
chr10	44547031	.	AC	A	852.33	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=10.077;DP=474;FS=6.253;HRun=4;HaplotypeScore=57.6401;InbreedingCoeff=0.9931;MQ=80.49;MQ0=0;MQRankSum=-3.623;QD=19.82;ReadPosRankSum=0.284;VQSLOD=2.7683;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:51.17:0,51,702	1/1:7,5:12:30.74:227,31,0	0/0:17,0:15:39.10:0,39,486	0/0:14,0:14:34.84:0,35,327	0/0:21,0:21:54.17:0,54,726	0/0:20,0:20:57.17:0,57,769	0/0:12,0:12:33.11:0,33,454	0/0:28,0:28:78.20:0,78,1011	0/0:9,0:9:27.09:0,27,372	0/0:21,0:21:57.19:0,57,784	0/0:23,0:23:63.19:0,63,848	0/0:13,0:13:39.13:0,39,538	0/0:18,0:18:54.15:0,54,709	0/0:8,0:8:24.08:0,24,331	0/0:17,0:17:51.17:0,51,703	0/0:11,0:11:33.09:0,33,438	1/1:12,19:31:75.81:747,76,0	0/0:26,0:26:78.26:0,78,1073	0/0:22,0:22:63.19:0,63,844	0/0:23,0:23:66.21:0,66,895	0/0:10,0:10:30.05:0,30,361	0/0:12,0:12:33.10:0,33,438	0/0:17,0:17:48.16:0,48,662	0/0:6,0:6:18.04:0,18,230	0/0:14,0:14:33.09:0,33,436	0/0:17,0:17:51.15:0,51,673	0/0:19,0:19:51.17:0,51,703	0/0:16,0:16:48.11:0,48,610
chr10	44547492	.	AC	A	298.39	PASS	AB=0.719;AC=2;AF=0.036;AN=56;BaseQRankSum=6.380;DP=689;FS=2.200;HRun=1;HaplotypeScore=81.9874;InbreedingCoeff=-0.0371;MQ=75.90;MQ0=0;MQRankSum=-5.880;QD=4.52;ReadPosRankSum=0.053;VQSLOD=0.2456;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:90.28:0,90,1413	0/1:8,5:13:99:133,0,280	0/0:22,0:21:59.62:0,60,847	0/0:29,0:29:87.18:0,87,1305	0/0:18,0:18:54.15:0,54,833	0/0:25,0:25:75.26:0,75,1198	0/0:34,0:34:99:0,102,1627	0/0:34,0:34:99:0,102,1587	0/0:25,0:25:75.22:0,75,1149	0/0:21,0:21:57.19:0,57,892	0/0:14,0:14:42.13:0,42,648	0/0:28,0:28:84.27:0,84,1315	0/0:22,0:22:66.21:0,66,1031	0/0:38,0:38:99:0,114,1815	0/0:30,0:31:92.12:0,92,1443	0/0:24,0:24:72.22:0,72,1122	0/1:32,21:53:99:254,0,1295	0/0:10,0:10:30.08:0,30,454	0/0:18,0:18:54.18:0,54,860	0/0:11,0:11:33.06:0,33,453	0/0:38,0:38:99:0,114,1791	0/0:15,0:15:45.12:0,45,671	0/0:14,0:14:42.10:0,42,621	0/0:30,0:30:87.28:0,87,1367	0/0:18,0:18:54.18:0,54,853	0/0:20,0:20:57.19:0,57,890	0/0:30,0:29:84.27:0,84,1319	0/0:22,0:22:66.23:0,66,1054
chr10	44547500	.	AG	A	271.47	PASS	AB=0.708;AC=2;AF=0.036;AN=56;BaseQRankSum=6.075;DP=647;FS=0.000;HRun=1;HaplotypeScore=76.2172;InbreedingCoeff=-0.0372;MQ=72.86;MQ0=0;MQRankSum=-5.152;QD=4.18;ReadPosRankSum=-0.747;VQSLOD=-0.1948;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:93.27:0,93,1434	0/1:8,5:12:99:134,0,302	0/0:23,0:22:39.80:0,40,845	0/0:28,0:28:78.25:0,78,1178	0/0:15,0:15:45.15:0,45,715	0/0:24,0:24:72.22:0,72,1126	0/0:30,0:30:90.31:0,90,1439	0/0:33,0:33:96.31:0,96,1508	0/0:23,0:23:66.22:0,66,1050	0/0:19,0:19:57.19:0,57,905	0/0:11,0:11:33.11:0,33,517	0/0:29,0:29:87.25:0,87,1363	0/0:20,0:20:60.20:0,60,953	0/0:37,0:37:99:0,111,1752	0/0:29,0:29:81.28:0,81,1290	0/0:22,0:22:66.23:0,66,1052	0/1:29,23:52:99:226,0,1235	0/0:10,0:10:30.10:0,30,480	0/0:20,0:20:60.20:0,60,929	0/0:7,0:7:21.07:0,21,336	0/0:38,0:38:99:0,114,1819	0/0:13,0:13:39.13:0,39,624	0/0:12,0:12:33.10:0,33,504	0/0:31,0:31:90.31:0,90,1436	0/0:15,0:15:42.14:0,42,671	0/0:18,0:18:51.17:0,51,814	0/0:24,0:24:72.25:0,72,1151	0/0:20,0:20:60.20:0,60,957
chr10	44548106	.	TC	T	665.36	PASS	AB=0.747;AC=2;AF=0.036;AN=56;BaseQRankSum=8.484;DP=815;FS=1.514;HRun=1;HaplotypeScore=99.8913;InbreedingCoeff=-0.0371;MQ=88.14;MQ0=0;MQRankSum=-2.040;QD=6.72;ReadPosRankSum=1.381;VQSLOD=0.7534;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,141,2236	0/1:12,6:18:99:138,0,475	0/0:27,0:27:81.21:0,81,1167	0/0:31,0:31:72.29:0,72,1248	0/0:21,0:21:63.21:0,63,1007	0/0:13,0:13:39.13:0,39,623	0/0:52,0:52:99:0,157,2468	0/0:43,0:43:99:0,129,2021	0/0:35,0:35:99:0,105,1677	0/0:19,0:19:57.19:0,57,911	0/0:15,0:15:45.14:0,45,695	0/0:17,0:17:51.17:0,51,814	0/0:20,0:20:60.20:0,60,955	0/0:32,0:32:96.30:0,96,1487	0/0:26,0:26:78.27:0,78,1245	0/0:28,0:28:84.29:0,84,1340	0/1:53,28:81:99:616,0,2275	0/0:35,0:35:99:0,105,1613	0/0:18,0:18:54.18:0,54,863	0/0:12,0:12:36.12:0,36,576	0/0:80,0:80:99:0,241,3777	0/0:21,0:21:63.21:0,63,1006	0/0:14,0:14:42.14:0,42,670	0/0:29,0:29:87.28:0,87,1366	0/0:18,0:18:54.18:0,54,851	0/0:33,0:33:99:0,99,1558	0/0:19,0:18:57.19:0,57,910	0/0:11,0:11:33.11:0,33,523
chr10	44548525	.	A	AG	802.93	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.007;DP=508;FS=9.702;HRun=5;HaplotypeScore=68.4651;InbreedingCoeff=0.9828;MQ=71.96;MQ0=0;MQRankSum=-6.268;QD=19.58;ReadPosRankSum=0.208;VQSLOD=2.3372;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,123,1286	1/1:1,11:12:24.06:350,24,0	0/0:15,0:13:33:0,33,308	0/0:17,0:17:15.17:0,15,346	0/0:21,0:21:57.14:0,57,613	0/0:16,0:15:35.98:0,36,386	0/0:14,0:14:36.09:0,36,386	0/0:26,0:26:57.13:0,57,602	0/0:14,0:14:36.05:0,36,374	0/0:15,0:15:45.11:0,45,479	0/0:11,0:11:33.04:0,33,330	0/0:11,0:11:27.06:0,27,290	0/0:6,0:6:18.05:0,18,193	0/0:8,0:8:24.06:0,24,258	0/0:19,0:19:51.10:0,51,533	0/0:14,0:14:39.10:0,39,419	1/1:10,19:29:39.82:574,40,0	0/0:15,0:15:39.10:0,39,419	0/0:23,0:23:69.16:0,69,728	0/0:19,0:19:57.14:0,57,610	0/0:28,0:28:69.16:0,69,733	0/0:22,0:22:63.14:0,63,665	0/0:22,0:22:54.12:0,54,572	0/0:26,0:26:49.22:0,49,689	0/0:23,0:23:66.16:0,66,709	0/0:14,0:14:42.07:0,42,440	0/0:16,0:16:45.10:0,45,475	0/0:7,0:7:21.05:0,21,226
chr10	44548583	.	G	GACAGAGGAAA	643.17	PASS	AB=0.814;AC=2;AF=0.036;AN=56;BaseQRankSum=4.341;DP=573;FS=10.036;HRun=0;HaplotypeScore=176.3793;InbreedingCoeff=-0.0371;MQ=90.40;MQ0=0;MQRankSum=-3.226;QD=24.74;ReadPosRankSum=0.259;VQSLOD=2.2191;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,134,4039	0/1:5,3:8:99:454,0,373	0/0:16,0:16:41.49:0,41,1245	0/0:31,0:31:72.55:0,73,1853	0/0:27,0:27:75.23:0,75,2196	0/0:15,0:14:42.13:0,42,1310	0/0:26,0:26:75.21:0,75,2185	0/0:26,0:26:72.25:0,72,2280	0/0:18,0:18:51.18:0,51,1599	0/0:24,0:24:66.23:0,66,2171	0/0:18,0:18:54.16:0,54,1580	0/0:19,0:19:57.20:0,57,1879	0/0:14,0:14:42.12:0,42,1257	0/0:13,0:13:39.13:0,39,1207	0/0:21,0:21:63.20:0,63,1948	0/0:15,0:15:39.12:0,39,1123	0/1:16,2:18:99:278,0,1042	0/0:14,0:14:39.11:0,39,1209	0/0:22,0:22:46.73:0,47,1798	0/0:16,0:16:48.11:0,48,1502	0/0:26,0:26:78.27:0,78,2466	0/0:27,0:27:78.27:0,78,2570	0/0:18,0:18:54.16:0,54,1604	0/0:26,0:26:75.21:0,75,2184	0/0:20,0:20:54.19:0,54,1748	0/0:16,0:16:42.14:0,42,1385	0/0:20,0:20:60.21:0,60,1977	0/0:12,0:12:29.59:0,30,826
chr10	44549052	.	AG	A	1165.61	PASS	AB=0.665;AC=2;AF=0.036;AN=56;BaseQRankSum=8.049;DP=720;FS=17.175;HRun=2;HaplotypeScore=87.1322;InbreedingCoeff=-0.0371;MQ=87.39;MQ0=1;MQRankSum=-2.922;QD=15.14;ReadPosRankSum=0.173;VQSLOD=2.1801;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,126,1879	0/1:10,18:28:99:617,0,364	0/0:34,0:34:99:0,99,1396	0/0:20,0:20:54.58:0,55,716	0/0:28,0:28:84.28:0,84,1256	0/0:26,0:26:72.24:0,72,1079	0/0:33,0:33:99:0,99,1465	0/0:35,0:35:96.30:0,96,1384	0/0:23,0:23:69.21:0,69,1012	0/0:19,0:19:57.19:0,57,846	0/0:15,0:15:42.14:0,42,621	0/0:24,0:24:72.23:0,72,1050	0/0:11,0:11:33.10:0,33,475	0/0:27,0:26:75.24:0,75,1104	0/0:16,0:16:45.15:0,45,674	0/0:12,0:12:36.12:0,36,540	0/1:30,19:49:99:638,0,987	0/0:20,0:20:60.20:0,60,898	0/0:28,0:28:81.24:0,81,1158	0/0:27,0:27:75.25:0,75,1122	0/0:31,0:31:93.26:0,93,1326	0/0:34,0:34:99:0,102,1482	0/0:25,0:25:69.20:0,69,992	0/0:25,0:25:75.19:0,75,1060	0/0:20,0:20:57.17:0,57,832	0/0:28,0:28:81.27:0,81,1213	0/0:28,0:27:84.27:0,84,1231	0/0:11,0:11:33.11:0,33,494
chr10	44549128	.	AT	A	958.89	PASS	AB=0.695;AC=2;AF=0.036;AN=56;BaseQRankSum=7.315;DP=746;FS=5.417;HRun=1;HaplotypeScore=98.3702;InbreedingCoeff=-0.0371;MQ=89.35;MQ0=0;MQRankSum=-3.860;QD=13.70;ReadPosRankSum=0.576;VQSLOD=2.7913;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:96.33:0,96,1534	0/1:14,8:22:99:246,0,569	0/0:30,0:30:83.45:0,83,1342	0/0:25,1:26:42.42:0,42,980	0/0:23,0:23:66.23:0,66,1055	0/0:22,0:22:66.21:0,66,1032	0/0:23,0:23:66.23:0,66,1053	0/0:36,0:36:99:0,105,1618	0/0:33,0:33:99:0,99,1512	0/0:23,0:23:66.22:0,66,1047	0/0:23,0:23:69.15:0,69,1072	0/0:31,0:31:90.31:0,90,1434	0/0:17,0:17:51.14:0,51,788	0/0:22,0:22:66.23:0,66,1050	0/0:17,0:17:48.15:0,48,744	0/0:23,0:23:69.24:0,69,1101	0/1:23,25:48:99:801,0,959	0/0:28,0:28:84.17:0,84,1261	0/0:35,0:35:99:0,102,1626	0/0:27,0:27:81.28:0,81,1293	0/0:31,0:31:93.32:0,93,1484	0/0:36,0:36:99:0,105,1608	0/0:26,0:26:78.25:0,78,1221	0/0:23,0:23:69.18:0,69,1052	0/0:17,0:17:48.16:0,48,766	0/0:25,0:25:75.26:0,75,1199	0/0:38,0:38:99:0,114,1817	0/0:9,0:9:27.09:0,27,422
chr10	44549234	.	AG	A	11108.84	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=3.031;DP=639;FS=0.000;HRun=9;HaplotypeScore=82.0877;InbreedingCoeff=0.9904;MQ=80.64;MQ0=1;MQRankSum=-6.496;QD=22.17;ReadPosRankSum=6.779;VQSLOD=4.6459;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,28:34:39.46:603,39,0	1/1:1,7:8:18.01:164,18,0	0/0:20,0:19:26.91:0,27,426	0/0:31,0:29:62.05:0,62,625	1/1:3,29:32:84.04:769,84,0	0/0:16,0:16:45.12:0,45,510	0/0:19,0:20:41.96:0,42,463	0/0:11,0:22:36.75:0,37,269	0/0:29,0:29:87.25:0,87,994	1/1:5,24:29:71.97:649,72,0	1/1:3,18:21:51.03:467,51,0	1/1:2,17:19:45.02:412,45,0	1/1:4,21:25:60.03:549,60,0	1/1:0,22:22:66.04:604,66,0	1/1:1,17:18:45.02:412,45,0	1/1:0,16:16:48.03:439,48,0	1/1:3,21:36:76.61:561,77,0	1/1:1,27:28:78.04:714,78,0	1/1:3,23:26:62.99:567,63,0	1/1:3,15:18:42.85:376,43,0	1/1:3,29:32:90.02:817,90,0	1/1:1,17:18:47.98:431,48,0	1/1:3,20:23:57.03:520,57,0	1/1:6,25:31:60.01:549,60,0	1/1:4,21:25:57.02:521,57,0	1/1:3,13:16:39.02:357,39,0	1/1:1,19:20:59.97:540,60,0	1/1:0,3:4:11.04:88,11,0
chr10	44549592	.	CATTT	C	9055.84	PASS	AB=0.517;AC=23;AF=0.411;AN=56;BaseQRankSum=10.416;DP=534;FS=0.738;HRun=0;HaplotypeScore=107.5257;InbreedingCoeff=0.9256;MQ=82.28;MQ0=0;MQRankSum=-3.705;QD=44.61;ReadPosRankSum=3.945;VQSLOD=4.9896;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,111,2895	0/0:14,0:14:36.10:0,36,605	0/0:25,0:23:51.16:0,51,1236	0/0:23,0:21:45.12:0,45,1139	0/0:27,0:27:75.24:0,75,1909	0/0:16,0:16:48.14:0,48,1212	0/0:23,0:23:66.20:0,66,1615	0/0:21,0:20:60.20:0,60,1548	0/0:14,0:14:42.13:0,42,1053	1/1:2,17:19:51.16:910,51,0	1/1:3,15:18:36.12:671,36,0	1/1:3,12:15:36.12:645,36,0	1/1:1,12:13:36.12:668,36,0	1/1:0,12:12:30.10:559,30,0	1/1:0,20:20:54.19:1007,54,0	0/1:1,14:15:34.88:738,0,35	0/0:25,0:25:63.12:0,63,1109	1/1:0,16:16:39.13:728,39,0	0/0:16,0:16:36.11:0,36,904	0/0:23,0:23:69.21:0,69,1638	0/0:11,0:11:30.09:0,30,697	1/1:0,18:18:51.17:951,51,0	1/1:2,18:20:42.14:778,42,0	1/1:2,14:16:27.09:504,27,0	1/1:1,20:21:48.16:895,48,0	0/0:28,1:29:31.34:0,31,2078	0/0:15,0:15:45.14:0,45,1145	0/0:9,0:9:27.05:0,27,579
chr10	44549623	.	CTGTGTGTGTG	C	400.26	PASS	AB=0.882;AC=9;AF=0.180;AN=50;BaseQRankSum=1.056;DP=583;FS=3.108;HRun=0;HaplotypeScore=191.8103;InbreedingCoeff=0.5002;MQ=59.07;MQ0=25;MQRankSum=-1.578;QD=3.45;ReadPosRankSum=0.689;VQSLOD=2.8691;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:37,1:38:4.82:93,5,0	0/0:18,0:20:21.54:0,22,682	./.	./.	./.	0/0:20,0:20:12.04:0,12,466	0/0:24,0:24:9.97:0,10,322	0/0:28,0:25:9.03:0,9,264	0/0:13,0:13:9.50:0,10,342	0/0:18,0:17:26.42:0,26,917	0/0:18,0:18:12.04:0,12,520	0/0:17,0:18:15.05:0,15,318	0/0:16,0:17:17.89:0,18,342	0/0:9,0:9:9.03:0,9,266	0/0:19,0:20:18.06:0,18,753	0/0:14,0:14:6.02:0,6,198	0/0:34,0:34:40.42:0,40,1141	0/0:18,0:17:10.28:0,10,276	0/0:21,0:18:0.47:0,0,1	1/1:20,2:20:2.59:88,3,0	1/1:15,3:17:3.01:88,3,0	0/0:22,0:22:9.03:0,9,254	0/0:19,0:18:6:0,6,120	0/0:15,0:19:21.07:0,21,594	0/0:16,0:15:18.03:0,18,497	1/1:20,3:21:2.70:146,3,0	0/1:13,2:14:10.93:108,0,11	0/0:4,0:4:4.25:0,4,35
chr10	44549826	.	G	GT	2253.67	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.480;DP=695;FS=0.469;HRun=6;HaplotypeScore=77.9346;InbreedingCoeff=0.9978;MQ=74.72;MQ0=2;MQRankSum=-3.450;QD=31.30;ReadPosRankSum=1.100;VQSLOD=3.9762;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:72.16:0,72,734	1/1:0,19:19:48.15:602,48,0	0/0:31,0:27:45.96:0,46,536	0/0:50,0:40:21.42:0,21,684	0/0:22,0:22:60.12:0,60,605	0/0:19,0:19:57.13:0,57,582	0/0:23,0:23:66.15:0,66,673	0/0:29,0:29:81.17:0,81,821	0/0:18,0:18:48.09:0,48,482	0/0:31,0:31:93.21:0,93,946	0/0:15,0:15:39.09:0,39,397	0/0:18,0:18:48.09:0,48,482	0/0:18,0:18:48.05:0,48,470	0/0:21,0:21:60.13:0,60,612	0/0:29,0:29:78.16:0,78,788	0/0:25,0:25:69.16:0,69,704	1/1:3,50:52:99:1773,141,0	0/0:13,0:13:39.08:0,39,392	0/0:25,0:25:69.16:0,69,704	0/0:29,0:29:81.16:0,81,818	0/0:32,0:32:81.15:0,81,817	0/0:23,0:23:66.13:0,66,663	0/0:18,0:18:45.10:0,45,459	0/0:18,0:18:45.06:0,45,448	0/0:22,0:22:60.13:0,60,611	0/0:26,0:26:69.15:0,69,704	0/0:28,0:28:75.14:0,75,756	0/0:11,0:11:33.08:0,33,337
chr10	44549979	.	A	ACG	1844.41	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.874;DP=651;FS=7.568;HRun=0;HaplotypeScore=85.7805;InbreedingCoeff=0.9914;MQ=95.45;MQ0=0;MQRankSum=-4.394;QD=39.24;ReadPosRankSum=3.658;VQSLOD=5.8351;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,105,1681	1/1:0,13:15:27.09:500,27,0	0/0:36,0:36:99:0,102,1566	0/0:25,0:26:56.80:0,57,1045	0/0:21,0:21:63.20:0,63,1000	0/0:24,0:24:72.25:0,72,1175	0/0:30,0:29:87.25:0,87,1345	0/0:25,0:25:75.25:0,75,1201	0/0:17,0:17:48.14:0,48,755	0/0:26,0:26:78.25:0,78,1227	0/0:20,0:20:48.16:0,48,780	0/0:21,0:21:63.22:0,63,1025	0/0:22,0:22:66.23:0,66,1073	0/0:25,0:25:75.26:0,75,1221	0/0:23,0:23:69.19:0,69,1054	0/0:21,0:21:63.22:0,63,1026	1/1:0,30:32:78.27:1466,78,0	0/0:21,0:21:57.14:0,57,893	0/0:22,0:22:66.23:0,66,1077	0/0:17,0:17:48.16:0,48,781	0/0:45,0:45:99:0,132,2146	0/0:16,0:16:48.16:0,48,776	0/0:19,0:19:57.19:0,57,929	0/0:22,0:22:63.22:0,63,1023	0/0:17,0:17:51.17:0,51,823	0/0:25,0:25:69.24:0,69,1126	0/0:20,0:20:60.20:0,60,978	0/0:6,0:6:15.05:0,15,244
chr10	44550107	.	T	TG	587.12	PASS	AB=0.661;AC=2;AF=0.036;AN=56;BaseQRankSum=6.950;DP=689;FS=6.089;HRun=4;HaplotypeScore=73.7753;InbreedingCoeff=-0.0370;MQ=80.72;MQ0=0;MQRankSum=-2.410;QD=15.45;ReadPosRankSum=1.914;VQSLOD=2.8151;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,129,1431	0/1:5,6:10:74.90:219,0,75	0/0:29,0:28:66.14:0,66,708	0/0:22,0:21:57.09:0,57,608	0/0:22,0:22:66.19:0,66,748	0/0:19,0:19:45.11:0,45,501	0/0:19,0:19:54.12:0,54,593	0/0:26,0:26:75.20:0,75,836	0/0:30,0:30:90.24:0,90,1011	0/0:27,0:27:69.18:0,69,765	0/0:17,0:17:44.80:0,45,497	0/0:14,0:14:39.11:0,39,442	0/0:28,0:28:78.20:0,78,869	0/0:22,0:22:63.16:0,63,696	0/0:19,0:19:54.14:0,54,603	0/0:26,0:26:69.17:0,69,765	0/1:14,13:27:99:457,0,270	0/0:18,0:18:48.13:0,48,544	0/0:27,0:27:78.20:0,78,867	0/0:31,0:31:90.23:0,90,1006	0/0:36,0:36:90.20:0,90,990	0/0:24,0:24:69.19:0,69,776	0/0:22,0:22:60.15:0,60,663	0/0:25,0:25:75.20:0,75,841	0/0:17,0:17:42.12:0,42,476	0/0:30,0:30:81.23:0,81,919	0/0:38,0:38:99:0,108,1181	0/0:12,0:12:36.04:0,36,367
chr10	44550119	.	A	AT	223.92	PASS	AB=0.736;AC=2;AF=0.036;AN=56;BaseQRankSum=5.657;DP=661;FS=2.417;HRun=0;HaplotypeScore=70.9005;InbreedingCoeff=-0.0370;MQ=73.93;MQ0=0;MQRankSum=-3.937;QD=7.22;ReadPosRankSum=0.536;VQSLOD=3.4198;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,132,1824	0/1:8,5:12:99:144,0,252	0/0:23,0:23:53.95:0,54,756	0/0:17,0:16:38.95:0,39,447	0/0:24,0:24:72.24:0,72,1006	0/0:17,0:17:51.16:0,51,697	0/0:22,0:22:66.21:0,66,903	0/0:28,0:28:78.23:0,78,1031	0/0:31,0:31:93.30:0,93,1279	0/0:26,0:26:78.26:0,78,1087	0/0:18,0:18:48.63:0,49,672	0/0:16,0:16:45.12:0,45,594	0/0:27,0:27:81.26:0,81,1114	0/0:21,0:21:63.20:0,63,863	0/0:19,0:19:57.13:0,57,758	0/0:21,0:21:63.21:0,63,874	0/1:12,6:18:99:169,0,408	0/0:18,0:18:54.16:0,54,737	0/0:26,0:26:78.24:0,78,1054	0/0:29,0:29:87.29:0,87,1211	0/0:39,0:39:99:0,114,1584	0/0:23,0:23:69.23:0,69,964	0/0:22,0:22:63.20:0,63,863	0/0:25,0:25:72.20:0,72,981	0/0:18,0:18:48.16:0,48,669	0/0:29,0:29:87.29:0,87,1215	0/0:33,0:33:99:0,99,1379	0/0:14,0:14:42.14:0,42,584
chr10	44550641	.	T	TACAC	820.03	PASS	AB=0.934;AC=20;AF=0.435;AN=46;BaseQRankSum=-4.142;DP=486;FS=3.448;HRun=0;HaplotypeScore=131.2578;InbreedingCoeff=0.3164;MQ=58.04;MQ0=17;MQRankSum=2.856;QD=3.50;ReadPosRankSum=-2.213;VQSLOD=2.3091;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:28,1:36:11.53:123,12,0	0/0:8,0:8:5.95:0,6,56	./.	./.	1/1:20,0:19:8.81:138,9,0	0/1:13,0:13:18:91,0,18	0/1:16,0:25:2.56:3,0,57	0/1:21,0:21:7.83:8,0,54	0/1:14,0:13:29.82:37,0,30	0/0:9,0:14:5.59:0,6,43	0/0:13,0:16:3:0,3,28	0/0:5,0:10:2.79:0,3,28	0/0:3,0:6:3:0,3,28	0/0:4,0:6:6.01:0,6,56	./.	./.	0/0:30,0:30:2.99:0,3,108	0/0:15,0:18:6.01:0,6,56	1/1:10,1:11:6.02:111,6,0	1/1:7,7:20:3.01:37,3,0	1/1:27,0:26:3.01:41,3,0	./.	0/0:9,0:17:11.68:0,12,111	0/0:12,0:17:3:0,3,28	0/0:14,0:17:12.01:0,12,112	1/1:24,0:23:22.82:268,23,0	1/1:7,2:15:4.24:73,4,0	1/1:5,0:5:3.01:38,3,0
chr10	44550719	.	GCT	G	1166.88	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-1.157;DP=540;FS=2.538;HRun=0;HaplotypeScore=120.9503;InbreedingCoeff=0.9569;MQ=82.84;MQ0=0;MQRankSum=-0.554;QD=38.90;ReadPosRankSum=-2.592;VQSLOD=4.7215;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,117,2183	0/0:7,0:7:12.04:0,12,224	0/0:22,0:22:63.21:0,63,1143	0/0:19,0:19:51.64:0,52,899	0/0:28,0:28:78.25:0,78,1429	0/0:20,0:20:60.19:0,60,1092	0/0:18,0:18:54.17:0,54,979	1/1:1,29:30:87.28:1262,87,0	0/0:22,0:22:63.22:0,63,1162	0/0:28,0:28:75.26:0,75,1402	0/0:14,0:14:39.13:0,39,721	0/0:9,0:9:27.09:0,27,505	0/0:8,0:8:24.08:0,24,449	0/0:16,0:16:45.15:0,45,822	0/0:10,0:10:30.10:0,30,562	0/0:7,0:7:18.06:0,18,337	0/0:36,0:36:99:0,99,1800	0/0:18,0:18:48.12:0,48,862	0/0:15,0:15:42.14:0,42,784	0/0:19,0:19:57.20:0,57,1067	0/0:32,0:32:90.20:0,90,1637	0/0:14,0:14:33.11:0,33,599	0/0:19,0:19:57.19:0,57,1047	0/0:12,0:12:24.08:0,24,449	0/0:12,0:12:33.04:0,33,542	0/0:24,0:24:72.20:0,72,1305	0/0:25,0:25:68.97:0,69,1285	0/0:13,0:13:33.11:0,33,618
chr10	44550966	.	AG	A	92.04	PASS	AB=0.696;AC=1;AF=0.018;AN=56;BaseQRankSum=4.462;DP=702;FS=1.448;HRun=4;HaplotypeScore=90.7339;InbreedingCoeff=-0.0219;MQ=88.13;MQ0=0;MQRankSum=-1.731;QD=5.75;ReadPosRankSum=-1.375;VQSLOD=-0.4593;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,126,1725	0/0:2,0:2:6.02:0,6,84	0/0:26,0:27:52.31:0,52,1021	0/0:35,0:35:83.51:0,84,1035	0/0:26,0:26:69.21:0,69,931	0/0:25,0:25:72.24:0,72,1008	0/0:22,0:22:60.20:0,60,840	0/0:32,0:32:84.27:0,84,1160	0/0:28,0:28:81.23:0,81,1112	0/0:34,0:34:99:0,102,1405	0/0:15,0:15:39.13:0,39,544	0/0:21,0:21:59.72:0,60,782	0/0:19,0:19:57.18:0,57,781	0/0:27,0:27:81.26:0,81,1111	0/0:24,0:24:66.22:0,66,924	0/0:27,0:27:75.25:0,75,1047	0/1:9,7:16:99:166,0,294	0/0:20,0:20:60.20:0,60,840	0/0:23,0:23:60.19:0,60,824	0/0:27,0:27:81.27:0,81,1122	0/0:39,0:39:99:0,114,1574	0/0:23,0:23:66.22:0,66,915	0/0:21,0:21:57.19:0,57,789	0/0:21,0:21:60.20:0,60,839	0/0:28,0:28:75.25:0,75,1040	0/0:20,0:20:57.15:0,57,771	0/0:40,0:40:99:0,120,1680	0/0:17,0:17:51.16:0,51,697
chr10	44551220	.	T	TA	2058.96	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-5.441;DP=499;FS=2.145;HRun=0;HaplotypeScore=104.6157;InbreedingCoeff=0.7914;MQ=81.22;MQ0=0;MQRankSum=1.945;QD=43.81;ReadPosRankSum=-3.371;VQSLOD=2.3695;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:33.11:0,33,459	0/0:3,0:3:9.03:0,9,126	0/0:22,0:22:61.79:0,62,853	0/0:15,0:15:44.95:0,45,561	0/0:17,0:17:48.07:0,48,643	0/0:23,0:23:60.20:0,60,837	0/0:15,0:15:45.15:0,45,628	1/1:3,44:47:99:2154,138,0	0/0:11,0:11:30.03:0,30,419	0/0:24,0:24:72.24:0,72,1004	0/0:15,0:15:36.08:0,36,480	0/0:20,0:20:60.20:0,60,837	0/0:18,0:18:54.18:0,54,739	0/0:17,0:17:45.15:0,45,627	0/0:28,0:28:78.26:0,78,1087	0/0:23,0:23:69.22:0,69,945	0/0:16,0:15:45.15:0,45,628	0/0:9,0:9:24.08:0,24,335	0/0:19,0:19:57.19:0,57,796	0/0:32,0:32:87.29:0,87,1213	0/0:6,0:6:18.06:0,18,252	0/0:24,0:24:60.30:0,60,872	0/0:19,0:19:57.19:0,57,795	0/0:4,0:4:3.01:0,3,42	0/0:27,0:27:75.25:0,75,1047	0/0:16,0:16:42.13:0,42,571	0/0:10,0:10:27.09:0,27,377	0/0:5,0:5:15.05:0,15,209
chr10	44556775	.	AG	A	2201.46	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=1.988;DP=548;FS=29.833;HRun=1;HaplotypeScore=150.4976;InbreedingCoeff=0.9945;MQ=73.15;MQ0=0;MQRankSum=-8.129;QD=31.01;ReadPosRankSum=-1.283;VQSLOD=1.0297;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:69.17:0,69,1055	0/0:20,0:20:60.18:0,60,922	0/0:27,0:27:80.93:0,81,1199	0/0:31,0:30:81.23:0,81,1247	0/0:17,0:17:48.16:0,48,763	0/0:27,0:26:81.24:0,81,1233	0/0:18,0:18:54.17:0,54,839	0/0:32,0:32:96.31:0,96,1475	0/0:17,0:17:48.16:0,48,767	1/1:3,11:14:39.08:509,39,0	1/1:0,8:8:15.01:187,15,0	0/0:20,0:20:57.19:0,57,909	0/0:22,0:22:63.06:0,63,922	0/0:16,0:16:45.08:0,45,679	1/1:1,18:19:48.12:647,48,0	1/1:1,11:12:24.08:335,24,0	0/0:23,0:23:63.13:0,63,940	1/1:0,11:11:33.11:460,33,0	0/0:15,0:15:45.14:0,45,695	0/0:20,0:20:60.20:0,60,946	0/0:23,0:23:69.23:0,69,1091	0/0:22,0:22:63.13:0,63,972	0/0:16,0:16:48.16:0,48,761	0/0:33,0:33:90.31:0,90,1410	1/1:1,6:7:18.06:250,18,0	0/0:27,0:27:78.25:0,78,1200	0/0:17,0:16:48.15:0,48,735	0/0:10,0:10:30.10:0,30,479
chr10	44556786	.	C	CA	12843.57	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=10.870;DP=540;FS=7.341;HRun=1;HaplotypeScore=110.2726;InbreedingCoeff=0.9903;MQ=78.64;MQ0=0;MQRankSum=-11.749;QD=37.78;ReadPosRankSum=5.868;VQSLOD=4.2821;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,21:23:57.18:834,57,0	0/0:18,0:18:54.16:0,54,686	0/0:25,0:25:75.20:0,75,923	0/0:43,0:42:99:0,114,1398	1/1:2,19:21:45.15:673,45,0	0/0:21,0:20:63.20:0,63,818	0/0:21,0:21:63.20:0,63,817	0/0:32,0:32:90.27:0,90,1131	0/0:22,0:22:63.20:0,63,817	1/1:3,10:13:33.07:467,33,0	1/1:1,7:8:18.02:244,18,0	1/1:2,17:19:54.14:784,54,0	1/1:0,20:20:57.19:853,57,0	1/1:0,15:15:45.15:674,45,0	1/1:4,13:17:42.02:554,42,0	1/1:6,7:13:15.04:204,15,0	0/0:18,0:18:51.17:0,51,662	1/1:2,7:9:24.08:359,24,0	1/1:1,13:14:39.13:585,39,0	1/1:0,16:17:51.17:760,51,0	1/1:1,22:23:63.21:944,63,0	1/1:3,19:22:51.17:763,51,0	1/1:4,17:21:48.12:691,48,0	1/1:0,28:28:75.25:1123,75,0	1/1:2,2:4:11.95:130,12,0	1/1:1,26:27:75.25:1122,75,0	1/1:1,15:15:42.14:629,42,0	1/1:0,10:10:30.10:450,30,0
chr10	44556858	.	G	GGT	11398.93	PASS	AB=0.636;AC=39;AF=0.696;AN=56;BaseQRankSum=14.854;DP=500;FS=53.205;HRun=0;HaplotypeScore=124.3246;InbreedingCoeff=0.8720;MQ=71.86;MQ0=0;MQRankSum=-11.289;QD=35.85;ReadPosRankSum=3.946;VQSLOD=2.3196;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,19:21:57.19:952,57,0	0/0:14,0:14:42.13:0,42,534	0/0:27,0:26:51.16:0,51,640	0/0:26,0:25:51.09:0,51,646	1/1:2,19:21:44.85:752,45,0	0/0:18,0:18:54.16:0,54,673	0/0:23,0:23:66.15:0,66,793	0/0:24,0:24:51.15:0,51,636	0/0:17,0:17:48.13:0,48,596	1/1:2,16:17:39.13:650,39,0	1/1:3,8:11:21.07:350,21,0	1/1:7,18:25:15.99:812,16,0	1/1:6,7:13:30.09:467,30,0	1/1:4,8:12:30.07:448,30,0	1/1:4,15:19:39.13:651,39,0	1/1:2,6:8:12.04:200,12,0	0/0:33,0:33:99:0,99,1242	1/1:0,1:1:3.01:50,3,0	0/1:6,8:14:20.09:232,0,20	1/1:5,16:22:54.18:897,54,0	1/1:6,18:25:46.74:799,47,0	1/1:3,13:16:39.13:651,39,0	1/1:3,16:20:42.14:701,42,0	1/1:4,5:9:15.05:251,15,0	1/1:1,11:12:33.11:538,33,0	1/1:8,13:21:9.97:696,10,0	1/1:2,19:21:51.17:851,51,0	1/1:0,9:9:27.09:451,27,0
chr10	44557062	.	C	CTAT	12377.97	PASS	AC=38;AF=0.704;AN=54;BaseQRankSum=13.530;DP=368;FS=64.150;HRun=0;HaplotypeScore=129.2744;InbreedingCoeff=0.9645;MQ=81.32;MQ0=0;MQRankSum=-13.461;QD=60.38;ReadPosRankSum=2.681;VQSLOD=1.3094;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,16:17:48.16:1178,48,0	0/0:9,0:9:27.09:0,27,503	0/0:21,0:21:48.12:0,48,771	0/0:19,0:19:51.14:0,51,767	1/1:4,13:17:30.10:736,30,0	0/0:13,0:13:35.97:0,36,563	0/0:26,0:26:78.25:0,78,1422	0/0:21,0:21:60.21:0,60,1114	0/0:18,0:18:54.19:0,54,1002	1/1:2,9:11:27.09:630,27,0	1/1:1,10:12:21.07:515,21,0	1/1:0,7:7:21.07:515,21,0	1/1:2,9:11:30.10:736,30,0	1/1:1,6:7:18.06:441,18,0	1/1:1,10:11:30.10:737,30,0	1/1:0,6:6:18.06:442,18,0	0/0:36,0:36:99:0,102,1818	./.	1/1:2,7:11:33.05:707,33,0	1/1:3,16:19:45.15:1104,45,0	1/1:2,3:5:9.03:221,9,0	1/1:1,10:11:21.07:513,21,0	1/1:3,11:14:36.12:876,36,0	1/1:0,7:7:18.06:435,18,0	1/1:1,6:7:18.06:439,18,0	1/1:2,12:15:27.19:972,27,0	1/1:1,14:15:42.14:1031,42,0	1/1:0,2:2:6.02:147,6,0
chr10	44557111	.	CCAGTGGAGGCA	C	11271.91	PASS	AB=1.000;AC=35;AF=0.625;AN=56;BaseQRankSum=14.092;DP=341;FS=64.276;HRun=0;HaplotypeScore=169.1059;InbreedingCoeff=0.5944;MQ=86.91;MQ0=0;MQRankSum=-14.434;QD=71.34;ReadPosRankSum=5.702;VQSLOD=2.3540;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:17:36.12:1064,36,0	0/0:7,0:7:21.07:0,21,1179	0/0:27,0:27:81.26:0,81,3725	0/0:23,0:23:69.15:0,69,3135	0/1:14,0:14:25.86:511,0,26	0/0:22,0:22:66.23:0,66,3708	0/0:21,0:21:63.21:0,63,3315	0/0:29,0:29:87.29:0,87,4754	0/0:22,0:22:66.21:0,66,3454	1/1:11,0:11:24.08:710,24,0	1/1:6,0:6:9.03:269,9,0	1/1:0,6:6:18.06:670,18,0	1/1:0,5:5:15.05:558,15,0	1/1:0,5:5:15.05:558,15,0	1/1:10,0:10:10.13:784,10,0	0/1:5,0:5:4.93:341,0,5	0/0:32,0:32:96.31:0,96,5309	1/1:2,0:2:6.02:174,6,0	1/1:3,0:3:9.03:265,9,0	1/1:22,0:22:34.21:1511,34,0	1/1:7,0:7:15.03:447,15,0	1/1:0,5:5:15.05:524,15,0	1/1:0,13:13:36.12:1274,36,0	1/1:0,5:5:9.50:329,10,0	0/1:6,0:6:2.95:344,0,3	0/1:7,0:7:20.92:339,0,21	0/1:7,0:7:18.88:418,0,19	1/1:2,0:2:6.02:179,6,0
chr10	44557112	.	CAGTGGAGGCAT	C	12364.59	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=14.557;DP=335;FS=69.672;HRun=0;HaplotypeScore=162.8068;InbreedingCoeff=0.9077;MQ=84.06;MQ0=0;MQRankSum=-14.487;QD=78.76;ReadPosRankSum=4.711;VQSLOD=2.2704;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,14:17:36.12:1290,36,0	0/0:7,0:7:21.07:0,21,1136	0/0:24,0:24:71.91:0,72,3431	0/0:21,0:21:60.21:0,60,2871	1/1:4,10:14:18.06:647,18,0	0/0:22,0:22:66.23:0,66,3628	0/0:21,0:21:60.21:0,60,3178	0/0:30,0:30:87.30:0,87,4695	0/0:22,0:22:63.20:0,63,3305	1/1:1,10:11:24.08:870,24,0	1/1:0,6:6:9.03:326,9,0	1/1:6,0:6:18.06:562,18,0	1/1:5,0:5:15.05:466,15,0	1/1:5,0:5:15.05:467,15,0	1/1:1,9:10:27.09:976,27,0	1/1:1,4:5:12.04:435,12,0	0/0:31,0:31:93.32:0,93,5110	1/1:0,2:2:6.02:215,6,0	1/1:0,3:3:9.03:326,9,0	1/1:4,18:22:51.18:1847,51,0	1/1:2,5:7:15.05:541,15,0	1/1:5,0:5:15.05:435,15,0	1/1:13,0:13:36.12:1062,36,0	1/1:5,0:5:9.50:278,10,0	1/1:2,4:6:12.04:435,12,0	1/1:2,4:6:12.04:435,12,0	1/1:3,4:7:15.05:534,15,0	1/1:0,2:2:6.02:218,6,0
chr10	44557333	.	TA	T	6338.43	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=12.659;DP=398;FS=16.598;HRun=7;HaplotypeScore=125.4368;InbreedingCoeff=0.9605;MQ=61.85;MQ0=1;MQRankSum=-8.991;QD=25.46;ReadPosRankSum=4.449;VQSLOD=3.3836;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,14:17:32.99:314,33,0	0/0:10,0:10:27.09:0,27,340	0/0:23,0:20:24.77:0,25,425	0/0:18,0:14:18.82:0,19,324	1/1:1,14:15:36.08:367,36,0	0/0:18,0:18:54.17:0,54,679	0/0:15,0:15:42.13:0,42,528	0/0:28,0:28:69.18:0,69,839	0/0:17,0:17:51.16:0,51,642	1/1:1,23:24:66.15:673,66,0	1/1:0,7:7:21.05:214,21,0	1/1:1,10:11:30.07:306,30,0	1/1:1,16:17:48.11:489,48,0	1/1:1,8:9:24.05:245,24,0	1/1:2,10:13:32.10:312,32,0	1/1:2,14:16:45.10:458,45,0	0/0:20,0:20:53.64:0,54,637	1/1:3,17:20:54.04:529,54,0	1/1:2,8:10:24.05:245,24,0	1/1:3,8:10:21:203,21,0	1/1:1,11:12:30.07:306,30,0	1/1:2,8:10:24.05:245,24,0	1/1:3,4:7:12.03:122,12,0	1/1:1,8:9:20.55:211,21,0	1/1:0,8:8:21.05:214,21,0	1/1:2,12:14:36.08:367,36,0	1/1:1,17:18:48.11:489,48,0	1/1:0,1:1:3.01:31,3,0
chr10	44557350	.	AAAACAAACAAACAAACAAACAAAC	A	11862.95	PASS	AC=38;AF=0.704;AN=54;BaseQRankSum=10.538;DP=339;FS=15.094;HRun=0;HaplotypeScore=240.8979;InbreedingCoeff=0.9116;MQ=57.18;MQ0=1;MQRankSum=-8.947;QD=61.79;ReadPosRankSum=5.931;VQSLOD=2.6801;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:12,1:13:15.01:323,15,0	0/0:5,0:9:24.07:0,24,1259	0/0:28,0:17:24.51:0,25,1483	0/0:23,0:14:33.11:0,33,2011	1/1:7,6:13:21.96:1063,22,0	0/0:23,0:24:63.20:0,63,4514	0/0:10,0:10:15.05:0,15,1173	0/0:16,0:18:36.11:0,36,1557	0/0:18,0:18:45.14:0,45,3603	1/1:17,4:21:39.04:968,39,0	1/1:4,2:6:9.03:417,9,0	1/1:5,3:8:18.05:675,18,0	1/1:13,3:16:44.91:959,45,0	1/1:4,3:7:18.05:674,18,0	1/1:6,2:8:21.03:552,21,0	1/1:4,8:12:33:1636,33,0	0/0:7,0:14:26.59:0,27,1639	1/1:12,3:15:36.10:931,36,0	1/1:6,0:5:9.02:108,9,0	1/1:4,1:4:6.02:74,6,0	1/1:8,1:9:17.97:343,18,0	1/1:3,4:7:12.04:765,12,0	1/1:3,1:4:6.02:229,6,0	1/1:8,2:10:20.43:371,20,0	1/1:6,0:5:6.02:91,6,0	1/1:10,1:11:24.06:466,24,0	1/1:9,6:15:36.03:1218,36,0	./.
chr10	44557369	.	AC	A	1785.28	PASS	AB=0.826;AC=32;AF=0.593;AN=54;BaseQRankSum=8.941;DP=335;FS=17.935;HRun=1;HaplotypeScore=161.4721;InbreedingCoeff=0.5454;MQ=43.43;MQ0=5;MQRankSum=-8.475;QD=9.45;ReadPosRankSum=3.721;VQSLOD=0.0707;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:12,3:15:3.55:52,0,4	0/0:8,0:8:12.04:0,12,175	0/0:32,0:17:21.97:0,22,460	0/0:19,0:11:33.11:0,33,472	1/1:9,2:11:0.70:59,1,0	0/0:23,0:23:63.20:0,63,919	0/0:11,0:11:33.10:0,33,459	0/0:25,0:23:68.18:0,68,874	0/0:15,0:15:45.11:0,45,638	1/1:14,5:17:19.04:251,19,0	1/1:4,1:5:7.78:56,8,0	0/1:5,2:7:5.42:46,0,5	1/1:6,6:12:23.06:186,23,0	0/1:7,2:9:3.33:43,0,3	0/1:8,2:10:1.24:59,0,1	1/1:11,1:12:17.19:98,17,0	0/0:13,0:13:20.01:0,20,240	1/1:8,5:13:31.23:282,31,0	0/1:10,2:10:45.26:77,0,45	1/1:3,1:3:8.42:48,8,0	1/1:7,1:8:20.67:148,21,0	1/1:6,0:6:6.79:32,7,0	0/1:4,1:5:3.08:19,0,3	1/1:5,3:8:16.32:115,16,0	1/1:1,1:2:5.97:48,6,0	1/1:6,4:10:4.37:173,4,0	1/1:17,4:21:23.27:182,23,0	./.
chr10	44557374	.	C	CA	2835.09	PASS	AB=0.759;AC=33;AF=0.635;AN=52;BaseQRankSum=2.565;DP=337;FS=8.065;HRun=3;HaplotypeScore=142.5050;InbreedingCoeff=0.6325;MQ=43.97;MQ0=5;MQRankSum=-6.994;QD=14.92;ReadPosRankSum=-4.845;VQSLOD=1.3170;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:4,11:15:20.63:386,21,0	0/0:8,0:8:17.18:0,17,111	0/0:29,0:15:13.32:0,13,366	0/0:19,0:11:30.06:0,30,344	1/1:8,5:13:2.42:131,2,0	0/0:22,0:22:62.91:0,63,713	0/0:12,0:12:36.11:0,36,431	0/0:25,0:23:60.11:0,60,683	0/0:15,0:15:39.09:0,39,454	1/1:12,5:15:12.69:231,13,0	1/1:3,4:7:7.18:121,7,0	0/1:5,3:8:4.12:70,0,4	1/1:9,2:12:8.46:125,8,0	1/1:5,5:10:4.06:152,4,0	1/1:4,6:10:13.05:192,13,0	0/1:9,3:12:16.54:87,0,17	0/0:15,0:15:37.48:0,37,289	1/1:8,5:13:13.82:230,14,0	1/1:4,10:12:24.91:397,25,0	1/1:3,3:5:6.02:74,6,0	1/1:2,5:7:8.82:94,9,0	0/1:4,2:6:7.49:60,0,7	1/1:2,3:5:5.23:88,5,0	1/1:5,3:8:8.69:89,9,0	./.	1/1:5,4:9:7.03:175,7,0	1/1:10,8:18:14.61:322,15,0	./.
chr10	44557715	.	GAAATCCATCAATGTAGTCTACTATAT	G	24696.13	PASS	AB=0.749;AC=33;AF=0.589;AN=56;BaseQRankSum=14.209;DP=435;FS=3.924;HRun=0;HaplotypeScore=310.9851;InbreedingCoeff=0.6769;MQ=42.85;MQ0=7;MQRankSum=-11.187;QD=101.21;ReadPosRankSum=4.830;VQSLOD=3.7271;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:7:3.01:0,3,42	0/0:11,0:11:30.10:0,30,3264	0/0:22,0:11:33.11:0,33,2600	0/0:27,0:21:51.18:0,51,3487	1/1:5,14:19:33.11:1822,33,0	0/0:34,0:34:96.33:0,96,9799	0/0:12,0:12:33.11:0,33,3767	0/0:21,0:21:57.20:0,57,4969	0/0:25,0:25:72.25:0,72,7311	1/1:7,16:23:45.15:3160,45,0	1/1:4,9:13:24.08:1590,24,0	1/1:5,10:14:21.07:1468,21,0	1/1:1,6:7:18.06:1264,18,0	1/1:4,9:12:27.09:1896,27,0	1/1:9,8:15:21.07:1475,21,0	0/1:7,4:8:99:828,0,300	0/0:31,0:30:90.31:0,90,8797	0/1:9,2:10:99:199,0,257	1/1:7,0:7:9.03:152,9,0	1/1:9,7:14:15.05:1053,15,0	1/1:4,0:4:2.99:24,3,0	1/1:7,12:19:33.11:2222,33,0	1/1:2,13:15:33.11:2317,33,0	0/1:4,4:8:99:202,0,362	1/1:2,4:6:6.02:421,6,0	1/1:3,12:15:36.10:2172,36,0	1/1:11,14:23:36.12:2432,36,0	0/0:1,0:1:3.01:0,3,117
chr10	44558713	.	A	AAAT	8772.23	PASS	AB=0.692;AC=38;AF=0.679;AN=56;BaseQRankSum=14.397;DP=374;FS=4.632;HRun=0;HaplotypeScore=102.4887;InbreedingCoeff=0.7422;MQ=40.06;MQ0=37;MQRankSum=-10.981;QD=54.83;ReadPosRankSum=3.808;VQSLOD=7.1980;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:2,5:7:25.23:343,0,25	0/0:9,0:9:27.09:0,27,503	0/0:33,0:5:6.01:0,6,82	0/0:34,0:9:18.05:0,18,302	1/1:2,10:12:33.11:638,33,0	0/0:30,0:30:90.31:0,90,1678	0/0:19,0:18:42.14:0,42,783	0/0:36,0:34:96.33:0,96,1782	0/0:20,0:20:60.17:0,60,1055	1/1:0,11:11:33.11:757,33,0	1/1:0,5:5:12.04:268,12,0	1/1:0,10:10:30.10:671,30,0	1/1:2,8:8:24.03:448,24,0	1/1:2,9:11:30.10:656,30,0	1/1:2,14:16:48.16:1020,48,0	1/1:0,13:13:39.13:884,39,0	0/0:33,0:33:99:0,99,1834	0/1:3,1:4:49.83:62,0,50	1/1:0,3:3:9.03:207,9,0	1/1:0,11:12:30.10:680,30,0	1/1:2,3:5:11.95:174,12,0	1/1:0,2:2:6.02:135,6,0	1/1:2,4:6:15.05:308,15,0	1/1:2,3:3:9.01:158,9,0	1/1:2,4:5:12.04:243,12,0	1/1:0,7:5:15.05:342,15,0	1/1:0,11:12:33.11:709,33,0	1/1:0,1:1:3.01:68,3,0
chr10	44558715	.	T	TATCTA	14709.69	PASS	AB=0.900;AC=40;AF=0.714;AN=56;BaseQRankSum=14.898;DP=423;FS=9.396;HRun=0;HaplotypeScore=129.0722;InbreedingCoeff=0.7888;MQ=38.82;MQ0=35;MQRankSum=-11.497;QD=61.04;ReadPosRankSum=3.745;VQSLOD=5.8153;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,5:9:27.09:826,27,0	0/0:9,0:9:27.09:0,27,629	0/0:33,0:7:18.03:0,18,244	0/1:34,0:11:1.84:2,0,401	1/1:2,10:12:27.09:812,27,0	0/0:30,0:30:90.31:0,90,2086	0/0:21,0:20:48.15:0,48,1034	0/0:37,0:35:99:0,99,2247	0/0:18,0:18:54.19:0,54,1239	1/1:3,11:14:42.14:1326,42,0	1/1:5,5:9:21.07:614,21,0	1/1:3,10:13:39.13:1169,39,0	1/1:4,8:10:24.08:726,24,0	1/1:4,9:13:25.19:1011,25,0	1/1:3,14:18:54.19:1638,54,0	1/1:5,13:18:51.18:1586,51,0	0/0:34,0:34:99:0,102,2332	0/1:3,1:4:63.83:88,0,64	1/1:6,3:6:15.05:474,15,0	1/1:4,11:14:33.11:1031,33,0	1/1:2,3:5:6.02:186,6,0	1/1:2,2:4:9.03:265,9,0	1/1:2,4:7:12.04:371,12,0	1/1:5,3:6:9.03:264,9,0	1/1:4,4:7:15.05:446,15,0	1/1:2,7:7:21.07:613,21,0	1/1:4,11:16:38.78:1167,39,0	1/1:2,1:3:3.01:94,3,0
chr10	44558991	.	AGAAGT	A	10391.53	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=13.679;DP=403;FS=15.876;HRun=0;HaplotypeScore=109.2916;InbreedingCoeff=0.9534;MQ=45.20;MQ0=1;MQRankSum=-14.079;QD=45.78;ReadPosRankSum=2.513;VQSLOD=4.3676;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,11:12:27.05:530,27,0	0/0:11,0:11:33.11:0,33,1046	0/0:25,0:18:54.19:0,54,1500	0/0:16,0:12:36.12:0,36,1090	1/1:0,11:11:15.05:313,15,0	0/0:24,0:24:69.22:0,69,2076	0/0:13,0:13:39.13:0,39,1192	0/0:24,0:24:72.23:0,72,2147	0/0:25,0:25:75.26:0,75,2286	1/1:0,6:6:18.06:391,18,0	1/1:4,16:19:42.14:888,42,0	1/1:0,17:17:48.16:1042,48,0	1/1:0,13:13:36.12:781,36,0	1/1:2,6:8:15.05:325,15,0	1/1:1,14:14:36.12:781,36,0	1/1:1,7:8:18.06:391,18,0	0/0:38,0:38:99:0,108,3345	1/1:9,6:12:15.05:326,15,0	1/1:2,9:10:27.06:542,27,0	1/1:2,18:20:51.18:1094,51,0	1/1:3,5:7:12.04:239,12,0	1/1:1,3:3:9.03:195,9,0	1/1:5,13:15:27.09:574,27,0	1/1:2,5:6:15.05:324,15,0	1/1:0,10:8:24.08:510,24,0	1/1:2,9:11:27.09:561,27,0	1/1:1,8:9:21.07:456,21,0	1/1:0,3:3:6.02:130,6,0
chr10	44559093	.	AC	A	4561.16	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=10.931;DP=627;FS=6.638;HRun=2;HaplotypeScore=113.8688;InbreedingCoeff=0.9767;MQ=51.02;MQ0=20;MQRankSum=-3.285;QD=27.48;ReadPosRankSum=-0.450;VQSLOD=3.9077;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,18:20:18.04:437,18,0	0/0:12,0:12:36.12:0,36,540	0/0:25,0:3:5.97:0,6,46	0/0:38,0:7:13.69:0,14,144	1/1:5,18:22:42.09:522,42,0	0/0:28,0:28:84.28:0,84,1258	0/0:12,0:12:36.12:0,36,538	0/0:33,0:32:96.25:0,96,1380	0/0:30,0:30:90.30:0,90,1348	0/0:31,0:30:90.22:0,90,1321	0/0:22,0:21:62.98:0,63,841	0/0:11,0:11:30.10:0,30,438	0/0:15,0:15:39.13:0,39,582	0/0:20,0:20:60.20:0,60,867	0/0:21,0:20:57.12:0,57,824	0/0:17,0:17:48.16:0,48,713	0/0:34,0:30:90.30:0,90,1348	0/0:25,0:22:54.15:0,54,784	1/1:2,9:10:27.09:350,27,0	1/1:2,38:37:93.06:1094,93,0	1/1:1,15:14:32.97:386,33,0	0/0:32,0:30:65.98:0,66,879	0/0:29,0:29:81.12:0,81,1156	0/0:11,0:10:30.03:0,30,421	0/0:14,0:13:39.06:0,39,557	1/1:2,24:23:24.25:798,24,0	1/1:0,19:18:45.15:584,45,0	1/1:0,10:10:30.10:389,30,0
chr10	44559166	.	CA	C	4664.89	PASS	AB=0.540;AC=14;AF=0.250;AN=56;BaseQRankSum=8.420;DP=527;FS=2.694;HRun=3;HaplotypeScore=117.6325;InbreedingCoeff=0.8082;MQ=53.92;MQ0=1;MQRankSum=-3.969;QD=30.49;ReadPosRankSum=0.776;VQSLOD=4.1618;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,13:13:39.12:482,39,0	0/0:13,0:13:39.13:0,39,562	0/0:14,0:13:18.64:0,19,395	0/0:16,0:12:33.08:0,33,453	1/1:3,29:32:75.22:913,75,0	0/0:19,0:19:52.89:0,53,756	0/0:12,0:12:36.12:0,36,518	0/0:33,0:33:93.30:0,93,1319	0/0:18,0:18:48.15:0,48,675	0/0:25,0:23:66.22:0,66,950	0/0:20,0:20:45.15:0,45,646	0/0:17,0:17:48.16:0,48,689	0/0:16,0:16:39.13:0,39,561	0/0:18,0:18:48.13:0,48,668	0/0:20,0:20:48.16:0,48,682	0/0:11,0:11:33.11:0,33,475	0/0:21,0:21:57.12:0,57,776	0/0:17,0:16:24.16:0,24,480	1/1:0,15:14:42.13:520,42,0	1/1:5,19:24:66.21:811,66,0	1/1:1,12:13:33.08:391,33,0	0/0:32,0:32:84.27:0,84,1190	0/0:23,0:23:63.21:0,63,898	0/0:12,0:12:30.10:0,30,430	0/0:17,0:17:45.15:0,45,648	0/1:3,18:21:23.24:629,0,23	1/1:3,18:21:51.14:617,51,0	0/1:2,11:13:48.54:301,0,49
chr10	44559240	.	G	GCCC	786.29	PASS	AB=0.923;AC=14;AF=0.250;AN=56;BaseQRankSum=6.696;DP=414;FS=2.931;HRun=1;HaplotypeScore=136.7252;InbreedingCoeff=0.0043;MQ=66.00;MQ0=1;MQRankSum=-8.678;QD=6.39;ReadPosRankSum=1.500;VQSLOD=-0.4391;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:11,0:11:63.55:64,0,144	0/0:11,0:11:33.02:0,33,507	0/0:18,0:17:51.16:0,51,852	0/0:24,0:24:62.20:0,62,985	0/1:7,0:7:35.93:45,0,36	0/0:26,0:26:78.27:0,78,1376	0/0:12,0:12:36.12:0,36,633	0/0:36,0:35:96.31:0,96,1649	0/0:17,0:17:48.15:0,48,810	0/0:16,0:16:41.50:0,41,394	0/0:17,0:17:44.49:0,44,341	0/1:10,0:11:25.53:26,0,116	0/1:13,0:13:24.99:25,0,47	0/0:15,0:15:11.17:0,11,133	0/0:14,0:14:32.98:0,33,299	0/0:12,0:12:32.97:0,33,304	0/0:30,0:30:90.22:0,90,1452	0/0:16,0:15:41.94:0,42,400	0/1:7,3:10:99:148,0,130	1/1:9,1:11:11.41:104,11,0	1/1:11,0:8:7.63:69,8,0	0/0:13,0:13:2.91:0,3,27	0/1:5,0:7:9.42:9,0,102	0/1:9,0:9:19.87:20,0,38	0/0:14,0:14:37.50:0,37,315	0/1:12,2:14:61.42:233,0,61	0/1:14,2:15:99:189,0,230	0/1:3,0:3:16.35:16,0,56
chr10	44559242	.	A	AC	3793.07	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=13.374;DP=431;FS=16.629;HRun=6;HaplotypeScore=121.8103;InbreedingCoeff=0.9023;MQ=64.79;MQ0=1;MQRankSum=-10.742;QD=14.76;ReadPosRankSum=2.458;VQSLOD=2.2960;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,0:11:11.36:57,11,0	0/0:11,0:11:27.05:0,27,269	0/0:20,0:19:54.05:0,54,525	0/0:22,0:22:39.75:0,40,401	1/1:6,0:8:5.68:28,6,0	0/0:26,0:26:78.17:0,78,791	0/0:13,0:13:36.08:0,36,367	0/0:36,0:35:93.14:0,93,919	0/0:16,0:16:45.10:0,45,458	1/1:7,12:19:42.57:503,43,0	1/1:0,18:18:45.13:545,45,0	1/1:5,0:10:14.37:94,14,0	1/1:4,1:13:25.91:157,26,0	1/1:5,0:16:22.85:119,23,0	1/1:1,12:13:33.10:410,33,0	1/1:2,11:13:30.09:373,30,0	0/0:29,0:30:77.60:0,78,761	1/1:3,12:14:30.09:373,30,0	1/1:8,0:10:14.20:72,14,0	1/1:11,0:15:8.56:39,9,0	1/1:4,0:8:10.81:48,11,0	1/1:5,0:12:14.20:71,14,0	1/1:7,0:7:2.97:20,3,0	1/1:8,1:14:17.95:125,18,0	1/1:2,12:14:36.11:435,36,0	1/1:6,1:13:28.58:166,29,0	1/1:11,0:17:23.53:125,24,0	1/1:5,0:6:5.81:34,6,0
chr10	44560453	.	TG	T	5507.98	PASS	AB=1.000;AC=39;AF=0.696;AN=56;BaseQRankSum=13.774;DP=378;FS=47.686;HRun=6;HaplotypeScore=109.7622;InbreedingCoeff=0.8788;MQ=63.05;MQ0=1;MQRankSum=-8.818;QD=22.39;ReadPosRankSum=5.039;VQSLOD=1.6802;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,13:15:30.07:318,30,0	0/0:5,0:5:12.03:0,12,142	0/0:10,0:10:27:0,27,319	0/0:21,0:21:50.86:0,51,593	1/1:0,12:12:27.07:286,27,0	0/0:11,0:11:30.10:0,30,394	0/0:19,0:19:48.14:0,48,615	0/0:21,0:21:60.18:0,60,769	0/0:16,0:16:42.14:0,42,552	1/1:2,7:9:21.05:223,21,0	1/1:2,10:12:18.04:191,18,0	0/1:16,0:16:23.56:24,0,25	1/1:2,13:15:39.10:412,39,0	1/1:4,14:18:42.10:440,42,0	1/1:2,12:14:33.08:348,33,0	1/1:2,10:12:27.07:286,27,0	0/0:28,0:28:81.26:0,81,1065	1/1:2,8:10:17.98:191,18,0	1/1:0,11:9:27.07:286,27,0	1/1:1,15:14:36.09:382,36,0	1/1:3,12:15:33.08:347,33,0	1/1:0,15:15:33.08:350,33,0	1/1:1,12:12:30.07:318,30,0	1/1:5,8:13:24.05:252,24,0	1/1:1,9:10:27.07:284,27,0	1/1:0,11:11:30.07:317,30,0	1/1:1,7:8:21.05:221,21,0	1/1:0,1:1:3.01:32,3,0
chr10	44560459	.	GC	G	5503.22	PASS	AB=0.556;AC=39;AF=0.696;AN=56;BaseQRankSum=14.251;DP=370;FS=48.972;HRun=1;HaplotypeScore=104.4462;InbreedingCoeff=0.8830;MQ=65.80;MQ0=1;MQRankSum=-8.798;QD=23.72;ReadPosRankSum=5.775;VQSLOD=1.7395;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:13:30.08:318,30,0	0/0:6,0:6:17.98:0,18,224	0/0:13,0:12:33:0,33,413	0/0:24,0:24:60.41:0,60,801	1/1:12,0:12:27.07:286,27,0	0/0:13,0:13:36.08:0,36,504	0/0:16,0:16:48.14:0,48,712	0/0:25,0:25:75.14:0,75,998	0/0:14,0:14:42.14:0,42,642	1/1:7,0:7:21.05:223,21,0	1/1:10,0:10:18.05:191,18,0	0/1:3,12:15:21.50:25,0,22	1/1:14,0:14:39.10:412,39,0	1/1:15,0:15:42.10:440,42,0	1/1:13,0:13:33.08:348,33,0	1/1:10,0:10:27.07:286,27,0	0/0:27,0:27:81.28:0,81,1239	1/1:10,0:10:17.98:191,18,0	1/1:12,0:10:27.07:286,27,0	1/1:16,0:14:36.09:382,36,0	1/1:14,0:14:33.08:347,33,0	1/1:15,0:15:33.08:350,33,0	1/1:12,0:11:30.08:318,30,0	1/1:12,0:12:24.05:252,24,0	1/1:10,0:10:27.07:284,27,0	1/1:12,0:12:30.07:317,30,0	1/1:9,0:8:21.04:215,21,0	1/1:1,0:1:3.01:32,3,0
chr10	44560574	.	AAG	A	2312.55	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=9.449;DP=214;FS=33.752;HRun=0;HaplotypeScore=47.6558;InbreedingCoeff=0.7337;MQ=99.26;MQ0=0;MQRankSum=-10.082;QD=24.60;ReadPosRankSum=1.677;VQSLOD=2.1211;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,8:9:15.05:220,15,0	0/0:9,0:9:24.08:0,24,442	0/0:19,0:19:57.19:0,57,985	0/0:9,0:9:27.09:0,27,497	1/1:0,5:5:15.05:220,15,0	0/0:19,0:19:54.15:0,54,940	0/0:4,0:4:12.04:0,12,213	0/0:29,0:29:84.27:0,84,1500	0/0:20,0:20:57.19:0,57,1047	1/1:1,3:4:12.03:160,12,0	1/1:0,5:5:5.81:57,6,0	1/1:1,3:4:6.02:88,6,0	1/1:1,2:3:6.02:88,6,0	1/1:1,1:2:3.01:44,3,0	1/1:0,5:5:6.02:88,6,0	1/1:0,2:2:6.02:88,6,0	0/0:11,0:11:30.10:0,30,562	1/1:1,1:2:3.01:44,3,0	1/1:0,5:5:9.03:132,9,0	1/1:1,5:6:9.03:131,9,0	1/1:1,4:5:3.01:44,3,0	1/1:4,4:8:12.04:176,12,0	1/1:0,10:10:24.08:352,24,0	1/1:0,3:3:5.78:88,6,0	1/1:0,4:4:6.02:88,6,0	1/1:0,6:5:15.05:220,15,0	1/1:1,2:3:3.01:44,3,0	1/1:0,3:3:9.03:132,9,0
chr10	44560705	.	GCC	G	717.94	PASS	AC=22;AF=0.579;AN=38;BaseQRankSum=3.251;DP=135;FS=3.626;HRun=2;HaplotypeScore=26.4866;InbreedingCoeff=0.6449;MQ=92.15;MQ0=0;MQRankSum=-1.920;QD=10.88;ReadPosRankSum=-1.684;VQSLOD=0.1763;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	0/0:1,0:1:3.01:0,3,40	0/0:6,0:6:18.06:0,18,344	0/0:12,0:12:36.01:0,36,521	./.	0/0:6,0:6:9.03:0,9,149	0/0:6,0:6:12.04:0,12,165	0/0:11,0:11:30.10:0,30,540	0/0:10,0:10:17.97:0,18,219	1/1:3,0:3:3.01:48,3,0	1/1:8,0:8:3.01:46,3,0	./.	./.	./.	./.	./.	0/0:2,0:2:2.98:0,3,22	./.	1/1:3,0:2:3.01:38,3,0	1/1:8,0:8:6.02:85,6,0	1/1:4,0:3:9.03:129,9,0	1/1:10,0:10:6.02:75,6,0	1/1:10,0:10:3.01:44,3,0	./.	1/1:11,0:11:12.04:154,12,0	1/1:0,4:4:12.04:176,12,0	1/1:2,0:2:5.98:65,6,0	1/1:3,0:3:1.82:5,2,0
chr10	44561682	.	CAA	C	1729.68	PASS	AB=1.000;AC=33;AF=0.660;AN=50;BaseQRankSum=6.963;DP=408;FS=13.168;HRun=3;HaplotypeScore=115.2924;InbreedingCoeff=0.6162;MQ=58.61;MQ0=11;MQRankSum=0.400;QD=6.84;ReadPosRankSum=0.831;VQSLOD=-0.6041;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:17:2.96:20,3,0	0/0:7,0:7:11.98:0,12,110	0/0:22,0:15:21.44:0,21,340	0/1:21,0:15:1.70:2,0,163	./.	0/0:14,0:14:30.07:0,30,265	0/0:18,0:17:41.93:0,42,414	0/0:19,0:19:56.60:0,57,478	0/0:21,0:21:52.98:0,53,411	1/1:24,0:24:30.42:273,30,0	./.	1/1:16,0:16:2.71:124,3,0	0/1:9,0:9:3.07:63,0,3	1/1:17,0:17:23.80:174,24,0	0/1:11,0:11:7.08:60,0,7	1/1:8,0:8:2.43:57,2,0	0/0:24,0:24:57.73:0,58,628	1/1:10,0:10:26.79:198,27,0	1/1:11,0:10:5.23:112,5,0	./.	1/1:18,0:14:8.76:104,9,0	1/1:22,0:22:23.78:177,24,0	1/1:11,0:9:4.11:51,4,0	1/1:15,0:15:8.73:168,9,0	1/1:15,0:14:5.73:38,6,0	1/1:5,9:13:20.61:146,21,0	1/1:10,0:10:17.72:122,18,0	1/1:4,0:4:2.94:19,3,0
chr10	44561980	.	A	AC	19264.39	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=14.994;DP=702;FS=6.333;HRun=1;HaplotypeScore=134.8380;InbreedingCoeff=0.9896;MQ=82.43;MQ0=1;MQRankSum=-14.122;QD=39.24;ReadPosRankSum=5.791;VQSLOD=3.8011;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,36:37:99:1516,108,0	0/0:11,0:11:24.08:0,24,311	0/0:30,0:30:84.26:0,84,1070	0/0:26,0:26:75.20:0,75,945	1/1:2,20:22:51.17:762,51,0	0/0:35,0:35:99:0,102,1309	0/0:22,0:22:66.21:0,66,856	0/0:32,0:32:87.27:0,87,1115	0/0:34,0:34:99:0,99,1286	1/1:1,26:27:78.26:1157,78,0	1/1:0,15:15:36.12:538,36,0	1/1:1,24:25:69.19:1008,69,0	1/1:0,21:21:60.16:873,60,0	1/1:1,26:27:78.26:1162,78,0	1/1:3,21:24:63.17:919,63,0	1/1:2,16:18:9.21:634,9,0	0/0:21,0:21:62.77:0,63,772	1/1:0,16:16:42.14:629,42,0	1/1:3,20:21:54.18:803,54,0	1/1:1,22:23:60.16:872,60,0	1/1:1,56:57:99:2382,160,0	1/1:1,21:22:51.17:763,51,0	1/1:0,15:15:33.11:493,33,0	1/1:0,38:38:99:1483,99,0	1/1:2,19:21:54.10:757,54,0	1/1:1,26:27:75.25:1122,75,0	1/1:1,24:26:72.24:1075,72,0	1/1:0,7:7:21.07:314,21,0
chr10	44562105	.	T	TTAAGA	19806.82	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=15.383;DP=451;FS=50.669;HRun=0;HaplotypeScore=187.1303;InbreedingCoeff=0.9357;MQ=70.56;MQ0=1;MQRankSum=-15.843;QD=69.01;ReadPosRankSum=3.122;VQSLOD=3.5234;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,14:16:42.14:1231,42,0	0/0:13,0:13:36.12:0,36,733	0/0:17,0:17:27.09:0,27,558	0/0:26,0:26:63.16:0,63,1195	1/1:4,10:14:15.05:420,15,0	0/0:28,0:28:75.22:0,75,1455	0/0:13,0:13:33.11:0,33,684	0/0:29,0:29:66.22:0,66,1324	0/0:17,0:17:48.15:0,48,957	1/1:5,11:16:36.12:1092,36,0	1/1:6,12:18:42.14:1210,42,0	1/1:2,16:18:48.16:1471,48,0	1/1:2,4:7:18.06:543,18,0	1/1:8,9:17:42.14:1220,42,0	1/1:5,13:18:51.17:1472,51,0	1/1:5,11:16:42.14:1287,42,0	0/0:21,0:21:63.22:0,63,1292	1/1:0,5:5:12.04:368,12,0	1/1:10,10:19:42.62:1230,43,0	1/1:7,13:20:39.13:1140,39,0	1/1:4,0:4:3.01:37,3,0	1/1:6,14:21:57.19:1606,57,0	1/1:5,9:14:27.09:772,27,0	1/1:2,3:5:9.03:222,9,0	1/1:4,9:13:33.11:1004,33,0	1/1:7,17:24:60.21:1806,60,0	1/1:7,11:18:51.18:1492,51,0	1/1:0,2:2:6.02:184,6,0
chr10	44562125	.	T	TTG	7473.09	PASS	AC=36;AF=0.692;AN=52;BaseQRankSum=15.328;DP=385;FS=43.249;HRun=0;HaplotypeScore=178.7052;InbreedingCoeff=0.9592;MQ=80.92;MQ0=0;MQRankSum=-15.264;QD=31.40;ReadPosRankSum=2.520;VQSLOD=3.3376;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,4:13:27.09:365,27,0	0/0:13,0:13:39.13:0,39,596	0/0:16,0:16:45.13:0,45,653	0/0:21,0:21:60.16:0,60,889	1/1:13,0:13:12.03:243,12,0	0/0:21,0:21:63.21:0,63,965	0/0:20,0:20:60.19:0,60,897	0/0:21,0:21:51.17:0,51,781	0/0:14,0:14:42.14:0,42,641	1/1:13,0:13:33:429,33,0	1/1:15,1:16:39.11:530,39,0	1/1:16,2:18:49.44:620,49,0	1/1:5,2:7:15.86:255,16,0	1/1:11,0:11:23.91:294,24,0	1/1:11,1:12:26.94:365,27,0	1/1:14,0:14:42.05:566,42,0	0/0:20,0:20:60.20:0,60,919	1/1:4,0:4:9.03:133,9,0	1/1:13,2:15:24.71:378,25,0	1/1:16,1:17:24.80:526,25,0	./.	1/1:19,1:20:50.54:730,51,0	1/1:12,0:12:27.06:393,27,0	1/1:4,0:4:6.02:85,6,0	1/1:13,0:13:25.54:373,26,0	1/1:19,0:19:47.72:605,48,0	1/1:14,3:17:13.48:584,13,0	./.
chr10	44562126	.	T	TG	4037.83	PASS	AB=0.571;AC=33;AF=0.635;AN=52;BaseQRankSum=15.183;DP=359;FS=34.899;HRun=0;HaplotypeScore=175.0609;InbreedingCoeff=0.7221;MQ=82.25;MQ0=0;MQRankSum=-14.885;QD=18.61;ReadPosRankSum=3.610;VQSLOD=1.6670;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,9:13:26.92:240,27,0	0/0:13,0:13:39.13:0,39,546	0/0:16,0:16:45.13:0,45,589	0/0:20,0:20:60.19:0,60,821	0/1:1,12:13:21.09:122,0,21	0/0:21,0:21:63.21:0,63,880	0/0:20,0:20:60.19:0,60,824	0/0:18,0:18:51.17:0,51,713	0/0:14,0:14:42.14:0,42,587	1/1:1,10:11:26.98:234,27,0	1/1:2,14:16:22.75:302,23,0	1/1:7,10:17:32.88:326,33,0	0/1:3,3:6:3.45:132,0,3	1/1:3,6:9:6.30:152,6,0	1/1:3,6:9:23.79:188,24,0	1/1:1,12:13:38.88:317,39,0	0/0:20,0:20:60.20:0,60,839	1/1:1,3:4:9:80,9,0	1/1:6,5:11:12.71:200,13,0	1/1:2,15:17:17.41:308,17,0	./.	1/1:4,15:19:22.17:361,22,0	1/1:2,11:13:10.96:197,11,0	1/1:1,2:3:5.99:50,6,0	0/1:1,9:10:2.03:147,0,2	1/1:4,12:16:33.96:377,34,0	1/1:7,10:17:1.47:304,1,0	./.
chr10	44562132	.	T	TTC	6848.16	PASS	AC=36;AF=0.667;AN=54;BaseQRankSum=15.586;DP=383;FS=20.604;HRun=0;HaplotypeScore=165.2478;InbreedingCoeff=0.9426;MQ=86.10;MQ0=0;MQRankSum=-15.404;QD=29.90;ReadPosRankSum=0.302;VQSLOD=4.6245;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,9:14:23.99:272,24,0	0/0:13,0:13:39.13:0,39,623	0/0:16,0:16:45.11:0,45,642	0/0:20,0:20:57.01:0,57,805	1/1:5,11:16:29.87:308,30,0	0/0:23,0:23:69.21:0,69,1053	0/0:22,0:22:66.19:0,66,985	0/0:20,0:20:54.16:0,54,799	0/0:16,0:16:48.09:0,48,690	1/1:6,10:16:41.97:465,42,0	1/1:3,14:17:44.98:512,45,0	1/1:4,10:15:42.09:491,42,0	1/1:3,3:6:17.97:183,18,0	1/1:4,6:11:26.99:304,27,0	1/1:4,6:10:27.06:320,27,0	1/1:2,12:14:39.13:499,39,0	0/0:23,0:23:66.21:0,66,1025	1/1:1,3:4:9.03:120,9,0	1/1:3,5:8:24.04:297,24,0	1/1:3,15:18:45.09:545,45,0	0/0:1,0:1:0:0,0,0	1/1:3,15:18:53.85:591,54,0	1/1:2,11:14:35.92:402,36,0	1/1:2,2:4:6.02:77,6,0	1/1:1,9:10:26.99:302,27,0	1/1:3,12:15:45.04:541,45,0	1/1:9,10:19:56.97:619,57,0	./.
chr10	44562226	.	T	TAA	12944.04	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=12.318;DP=440;FS=1.160;HRun=1;HaplotypeScore=92.1731;InbreedingCoeff=0.9776;MQ=78.92;MQ0=0;MQRankSum=-14.865;QD=49.59;ReadPosRankSum=-1.220;VQSLOD=4.4625;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,10:11:24.08:445,24,0	0/0:15,0:15:45.15:0,45,689	0/0:24,0:24:63.21:0,63,929	0/0:10,0:10:26.42:0,26,400	1/1:6,18:24:57.09:924,57,0	0/0:29,0:29:87.26:0,87,1287	0/0:22,0:22:66.22:0,66,1007	0/0:26,0:26:78.26:0,78,1194	0/0:23,0:23:66.20:0,66,982	1/1:5,21:26:75.22:1404,75,0	1/1:4,6:10:30.02:477,30,0	1/1:3,10:13:39.09:673,39,0	1/1:0,3:3:9.03:174,9,0	1/1:4,8:12:36.05:571,36,0	1/1:2,5:7:21.07:392,21,0	1/1:3,6:9:21.07:388,21,0	0/0:30,0:30:90.29:0,90,1349	1/1:0,8:8:24.08:463,24,0	1/1:1,5:6:15.05:273,15,0	1/1:2,20:22:54.19:1041,54,0	1/1:0,8:8:21.07:394,21,0	1/1:3,11:14:38.82:734,39,0	1/1:4,20:24:63.16:1125,63,0	1/1:2,4:6:18.03:287,18,0	1/1:5,18:23:69.15:1201,69,0	1/1:1,6:7:21.07:386,21,0	1/1:2,22:24:72.25:1359,72,0	1/1:0,4:4:12.04:232,12,0
chr10	44562267	.	A	AT	9565.29	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=15.830;DP=434;FS=2.687;HRun=1;HaplotypeScore=113.6676;InbreedingCoeff=0.9923;MQ=84.93;MQ0=0;MQRankSum=-14.587;QD=36.10;ReadPosRankSum=0.729;VQSLOD=4.6457;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,14:14:30.03:421,30,0	0/0:9,0:9:27.09:0,27,350	0/0:30,0:30:83.73:0,84,1034	0/0:13,0:13:36.07:0,36,431	1/1:2,19:21:45.15:666,45,0	0/0:28,0:28:84.26:0,84,1075	0/0:13,0:13:39.11:0,39,491	0/0:33,0:32:96.30:0,96,1234	0/0:19,0:19:57.19:0,57,740	1/1:1,18:19:54.18:808,54,0	1/1:0,10:10:24.08:359,24,0	1/1:1,14:15:42.14:628,42,0	1/1:1,6:7:15.05:224,15,0	1/1:2,9:11:30.06:422,30,0	1/1:0,11:11:33.11:493,33,0	1/1:2,13:15:42.11:604,42,0	0/0:24,0:24:72.23:0,72,935	1/1:1,7:8:18.06:269,18,0	1/1:0,12:11:33.11:494,33,0	1/1:4,14:18:45.07:618,45,0	1/1:0,11:11:21.07:314,21,0	1/1:2,14:16:36.08:513,36,0	1/1:1,15:16:27.09:397,27,0	1/1:0,9:9:24.04:334,24,0	1/1:1,18:19:51.09:713,51,0	1/1:2,6:8:24.06:336,24,0	1/1:0,17:17:51.04:710,51,0	1/1:1,7:8:17.99:242,18,0
chr10	44562374	.	C	CT	147.10	PASS	AB=0.950;AC=22;AF=0.407;AN=54;BaseQRankSum=8.168;DP=290;FS=3.253;HRun=0;HaplotypeScore=75.1090;InbreedingCoeff=0.5163;MQ=98.66;MQ0=0;MQRankSum=-8.369;QD=2.07;ReadPosRankSum=-0.565;VQSLOD=2.3064;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:8,1:9:1.28:1,0,10	0/0:10,0:10:24.08:0,24,336	0/0:22,0:22:66.22:0,66,897	0/0:26,0:26:73.83:0,74,935	0/0:1,0:1:0.47:0,0,1	0/0:22,0:22:66.22:0,66,922	0/0:24,0:24:72.22:0,72,985	0/0:34,0:34:96.20:0,96,1285	0/0:27,0:27:81.27:0,81,1133	1/1:7,1:8:6.85:87,7,0	0/0:4,0:4:3.31:0,3,11	1/1:2,0:2:0.28:1,0,0	0/0:4,0:4:1.36:0,1,4	1/1:5,0:5:3.11:38,3,0	1/1:5,0:5:0.33:1,0,0	1/1:6,1:7:5.51:44,6,0	0/0:27,0:27:78.24:0,78,1051	1/1:5,1:6:10.22:59,10,0	1/1:10,0:9:3.90:26,4,0	0/0:5,1:6:1.27:0,1,7	0/0:8,0:8:1.45:0,1,4	0/0:2,0:2:0.89:0,1,2	0/0:2,0:2:0.94:0,1,2	1/1:5,1:6:2.73:18,3,0	1/1:2,0:2:0.94:2,1,0	1/1:1,0:1:1.25:3,1,0	0/1:10,0:10:3.70:6,0,4	./.
chr10	44562449	.	TG	T	10478.61	PASS	AC=38;AF=0.704;AN=54;BaseQRankSum=14.910;DP=438;FS=1.687;HRun=1;HaplotypeScore=93.2065;InbreedingCoeff=0.9964;MQ=76.31;MQ0=0;MQRankSum=-14.136;QD=39.69;ReadPosRankSum=8.687;VQSLOD=3.8297;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,21:21:57.19:795,57,0	0/0:13,0:13:39.13:0,39,623	0/0:22,0:22:48.73:0,49,785	0/0:18,0:18:48.88:0,49,699	1/1:0,18:18:48.12:648,48,0	0/0:16,0:16:45.15:0,45,708	0/0:25,0:25:72.25:0,72,1149	0/0:28,0:28:84.28:0,84,1322	0/0:26,0:26:78.25:0,78,1223	1/1:0,16:16:48.16:665,48,0	1/1:0,8:8:24.08:335,24,0	1/1:0,18:18:54.18:754,54,0	1/1:0,11:11:30.10:417,30,0	1/1:0,11:11:33.11:460,33,0	1/1:0,15:15:45.12:607,45,0	1/1:0,12:12:36.12:502,36,0	0/0:26,0:26:78.24:0,78,1212	1/1:0,12:12:36.12:503,36,0	1/1:0,17:16:48.13:651,48,0	1/1:0,17:17:51.17:711,51,0	1/1:1,18:19:51.17:712,51,0	1/1:0,8:8:21.07:293,21,0	1/1:0,7:7:21.03:271,21,0	1/1:0,7:7:18.06:251,18,0	1/1:0,8:8:24.08:335,24,0	1/1:1,17:18:54.16:736,54,0	1/1:1,20:21:60.20:833,60,0	./.
chr10	44562518	.	GT	G	3079.29	PASS	AC=38;AF=0.704;AN=54;BaseQRankSum=12.491;DP=313;FS=30.118;HRun=3;HaplotypeScore=63.4150;InbreedingCoeff=0.8584;MQ=103.56;MQ0=0;MQRankSum=-12.317;QD=26.32;ReadPosRankSum=2.635;VQSLOD=1.8087;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,7:8:18.06:223,18,0	0/0:12,0:12:36.12:0,36,518	0/0:30,0:30:78.25:0,78,1091	0/0:21,0:21:51.16:0,51,701	1/1:2,5:7:9.03:111,9,0	0/0:24,0:24:66.22:0,66,950	0/0:23,0:23:66.22:0,66,951	0/0:29,0:29:84.27:0,84,1178	0/0:30,0:30:87.28:0,87,1234	1/1:0,8:8:24.08:297,24,0	1/1:0,2:2:6.02:74,6,0	1/1:0,3:3:9.03:111,9,0	1/1:0,6:6:12.04:148,12,0	1/1:1,2:3:6.01:64,6,0	1/1:0,4:4:12.04:148,12,0	1/1:0,8:8:24.08:297,24,0	0/0:27,0:27:78.26:0,78,1121	1/1:1,6:7:15.05:186,15,0	1/1:0,12:12:30.09:362,30,0	1/1:3,5:8:15.05:183,15,0	1/1:4,4:8:3.01:37,3,0	1/1:0,6:6:18.06:223,18,0	1/1:3,4:7:15.05:185,15,0	1/1:0,1:1:3.01:37,3,0	1/1:1,3:4:9.03:111,9,0	1/1:2,7:9:24.07:296,24,0	1/1:1,5:6:15.05:186,15,0	./.
chr10	44562596	.	T	TG	525.39	PASS	AC=20;AF=0.556;AN=36;BaseQRankSum=6.271;DP=164;FS=25.374;HRun=3;HaplotypeScore=44.7048;InbreedingCoeff=0.6691;MQ=99.13;MQ0=1;MQRankSum=-5.921;QD=29.19;ReadPosRankSum=2.410;VQSLOD=1.7639;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	0/0:14,0:14:39.12:0,39,467	0/0:13,0:13:1.80:0,2,202	0/0:18,0:14:27.49:0,27,295	./.	0/0:14,0:14:36.11:0,36,426	0/0:19,0:19:54.12:0,54,613	0/0:23,0:23:63.18:0,63,745	0/0:19,0:19:54.17:0,54,647	1/1:0,3:3:6.02:84,6,0	1/1:0,1:1:3.01:41,3,0	1/1:0,1:1:3.01:42,3,0	1/1:0,3:3:9.03:125,9,0	1/1:0,2:2:6.02:83,6,0	1/1:0,2:2:6.02:84,6,0	1/1:0,2:2:6.02:84,6,0	0/0:24,0:24:66.20:0,66,792	1/1:0,1:1:3.01:42,3,0	./.	./.	./.	./.	1/1:0,2:2:3.01:42,3,0	1/1:0,1:1:3.01:42,3,0	./.	./.	./.	./.
chr10	44562625	.	GC	G	245.16	PASS	AC=14;AF=0.467;AN=30;BaseQRankSum=5.467;DP=160;FS=26.351;HRun=1;HaplotypeScore=45.2049;InbreedingCoeff=0.7146;MQ=68.92;MQ0=23;MQRankSum=-3.775;QD=24.52;ReadPosRankSum=-0.612;VQSLOD=1.9291;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/0:10,0:10:30.10:0,30,477	0/0:24,0:8:17.57:0,18,281	0/0:17,0:4:8.90:0,9,110	./.	0/0:15,0:15:45.15:0,45,717	0/0:23,0:23:66.22:0,66,1034	0/0:17,0:17:51.17:0,51,811	0/0:17,0:17:51.12:0,51,779	./.	1/1:0,1:1:3.01:36,3,0	./.	1/1:0,2:2:6.02:75,6,0	1/1:0,1:1:3.01:36,3,0	1/1:0,2:2:6.02:76,6,0	1/1:0,2:2:6.02:76,6,0	0/0:27,0:27:78.27:0,78,1241	./.	./.	./.	./.	./.	1/1:0,1:1:3.01:37,3,0	1/1:0,1:1:3.01:37,3,0	./.	./.	./.	./.
chr10	44562629	.	TG	T	198.34	PASS	AC=14;AF=0.467;AN=30;BaseQRankSum=5.237;DP=167;FS=27.285;HRun=2;HaplotypeScore=46.2265;InbreedingCoeff=0.7268;MQ=62.45;MQ0=25;MQRankSum=-4.500;QD=19.83;ReadPosRankSum=-0.512;VQSLOD=1.8723;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	0/0:11,0:11:33.11:0,33,510	0/0:24,0:7:21.07:0,21,319	0/0:18,0:6:15.04:0,15,190	./.	0/0:15,0:15:45.15:0,45,719	0/0:23,0:23:66.23:0,66,1054	0/0:18,0:18:54.15:0,54,797	0/0:19,0:19:57.16:0,57,854	./.	1/1:0,1:1:3.01:32,3,0	./.	1/1:0,2:2:6.02:66,6,0	1/1:0,1:1:3.01:32,3,0	1/1:0,2:2:6.02:66,6,0	1/1:0,2:2:6.02:67,6,0	0/0:28,0:28:81.28:0,81,1295	./.	./.	./.	./.	./.	1/1:0,1:1:3.01:32,3,0	1/1:0,1:1:3.01:32,3,0	./.	./.	./.	./.
chr10	44563472	.	AT	A	3510.83	PASS	AB=0.536;AC=15;AF=0.268;AN=56;BaseQRankSum=7.535;DP=515;FS=8.654;HRun=1;HaplotypeScore=116.2797;InbreedingCoeff=0.8994;MQ=65.40;MQ0=0;MQRankSum=-5.315;QD=27.86;ReadPosRankSum=0.914;VQSLOD=2.7145;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,11:11:27.09:348,27,0	0/0:15,0:15:45.11:0,45,599	0/0:18,0:14:26.12:0,26,429	0/0:19,0:18:35.82:0,36,405	1/1:0,30:30:74.90:843,75,0	0/0:29,0:29:87.26:0,87,1233	0/0:14,0:14:42.09:0,42,556	0/0:37,0:37:99:0,111,1487	0/0:19,0:19:57.07:0,57,737	0/0:24,0:21:47.46:0,47,614	0/0:25,0:25:56.36:0,56,705	0/0:16,0:16:38.97:0,39,453	0/0:18,0:18:48.09:0,48,616	0/0:22,0:22:51.61:0,52,647	0/0:12,0:12:27.09:0,27,359	0/0:12,0:12:36.05:0,36,452	0/0:12,0:12:36.12:0,36,526	0/0:16,0:16:44.95:0,45,545	1/1:0,19:20:59.46:702,59,0	1/1:0,13:14:23.40:260,23,0	1/1:0,10:10:14.99:174,15,0	0/0:22,0:18:37.26:0,37,469	0/0:24,0:19:51.17:0,51,683	0/0:9,0:9:21.05:0,21,264	0/0:26,0:23:54.02:0,54,705	0/1:2,12:14:20.62:337,0,21	1/1:0,20:20:54.17:693,54,0	1/1:0,6:6:12.04:155,12,0
chr10	44563590	.	TG	T	2608.31	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=14.555;DP=374;FS=132.780;HRun=2;HaplotypeScore=126.0625;InbreedingCoeff=0.9007;MQ=66.63;MQ0=0;MQRankSum=-13.683;QD=14.25;ReadPosRankSum=2.585;VQSLOD=-0.2514;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,3:10:11.98:97,12,0	0/0:12,0:12:36.11:0,36,516	0/0:17,0:17:51.16:0,51,742	0/0:24,0:23:69.21:0,69,965	1/1:15,3:18:35.94:317,36,0	0/0:30,0:30:87.29:0,87,1303	0/0:16,0:16:45.60:0,46,646	0/0:30,0:30:90.30:0,90,1320	0/0:27,0:27:78.26:0,78,1168	1/1:11,0:11:14.97:121,15,0	1/1:16,0:16:11.92:87,12,0	1/1:8,0:7:17.91:137,18,0	1/1:10,0:10:26.91:208,27,0	1/1:11,0:10:23.91:183,24,0	1/1:8,0:8:11.97:102,12,0	1/1:2,0:2:5.97:45,6,0	0/0:35,0:35:99:0,105,1553	1/1:4,0:4:11.99:102,12,0	1/1:10,1:10:15.42:130,15,0	1/1:14,0:13:38.80:300,39,0	1/1:10,0:10:14.93:135,15,0	1/1:9,1:8:17.92:137,18,0	1/1:6,1:7:14.98:133,15,0	1/1:4,0:4:5.97:44,6,0	1/1:9,1:10:17.94:148,18,0	1/1:4,1:5:14.96:121,15,0	1/1:11,0:11:29.95:246,30,0	1/1:3,0:3:2.99:24,3,0
chr10	44563591	.	G	GA	3073.86	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=14.645;DP=343;FS=140.329;HRun=0;HaplotypeScore=118.1807;InbreedingCoeff=0.9046;MQ=70.41;MQ0=0;MQRankSum=-13.325;QD=20.36;ReadPosRankSum=2.198;VQSLOD=-0.5473;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,4:7:12:106,12,0	0/0:12,0:12:36.12:0,36,502	0/0:18,0:18:39.18:0,39,659	0/0:25,0:24:66.16:0,66,869	1/1:5,11:16:35.99:336,36,0	0/0:29,0:29:87.29:0,87,1217	0/0:16,0:16:44.98:0,45,606	0/0:30,0:30:90.29:0,90,1242	0/0:27,0:27:78.26:0,78,1091	1/1:1,7:8:15.03:148,15,0	1/1:4,5:9:17.97:146,18,0	1/1:1,6:6:17.95:151,18,0	1/1:0,9:9:26.99:234,27,0	1/1:2,8:9:26.97:226,27,0	1/1:2,5:7:12:109,12,0	1/1:0,2:2:6:51,6,0	0/0:35,0:35:99:0,105,1468	1/1:0,4:4:12.02:122,12,0	1/1:5,4:8:15.04:178,15,0	1/1:1,13:13:38.95:338,39,0	1/1:1,6:7:14.96:161,15,0	1/1:2,7:7:17.99:152,18,0	1/1:1,5:6:15.01:161,15,0	1/1:1,3:4:5.98:47,6,0	1/1:1,6:7:18:161,18,0	1/1:1,4:5:15.02:162,15,0	1/1:0,10:10:29.87:268,30,0	1/1:0,1:1:3:27,3,0
chr10	44563592	.	GTGT	G	3159.81	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=14.543;DP=339;FS=129.111;HRun=0;HaplotypeScore=128.6134;InbreedingCoeff=0.8955;MQ=69.38;MQ0=0;MQRankSum=-13.775;QD=21.64;ReadPosRankSum=3.328;VQSLOD=0.8468;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,4:7:12.03:126,12,0	0/0:13,0:13:36.11:0,36,805	0/0:19,0:19:57.16:0,57,1124	0/0:24,0:23:69.13:0,69,1462	1/1:6,10:16:31.22:307,31,0	0/0:29,0:29:87.30:0,87,2055	0/0:16,0:16:45.15:0,45,1062	0/0:30,0:30:84.29:0,84,1946	0/0:27,0:27:81.28:0,81,1880	1/1:8,0:8:15.04:172,15,0	1/1:6,0:6:12.01:113,12,0	1/1:7,0:6:18.03:180,18,0	1/1:9,0:9:27.06:277,27,0	1/1:9,0:8:24.05:240,24,0	1/1:7,0:7:10.84:96,11,0	1/1:2,0:2:6.01:60,6,0	0/0:35,0:35:99:0,105,2455	1/1:4,0:4:12.04:141,12,0	1/1:5,4:8:11.35:117,11,0	1/1:1,13:13:39.08:402,39,0	1/1:1,6:7:14.76:133,15,0	1/1:9,0:7:18.04:181,18,0	1/1:6,0:6:14.56:116,15,0	1/1:3,0:3:6.01:57,6,0	1/1:7,0:7:17.07:158,17,0	1/1:2,3:5:14.25:141,14,0	1/1:0,10:10:30.05:320,30,0	1/1:0,1:1:3.01:32,3,0
chr10	44563593	.	TG	T	971.60	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=14.561;DP=334;FS=128.872;HRun=2;HaplotypeScore=123.4759;InbreedingCoeff=0.8755;MQ=69.69;MQ0=0;MQRankSum=-13.912;QD=6.84;ReadPosRankSum=3.241;VQSLOD=0.3058;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,0:7:10.39:39,10,0	0/0:12,0:12:36.12:0,36,570	0/0:19,0:19:55.71:0,56,759	0/0:25,0:23:69.18:0,69,995	1/1:15,0:15:29.66:131,30,0	0/0:29,0:29:87.30:0,87,1385	0/0:16,0:16:45.62:0,46,719	0/0:28,0:28:84.26:0,84,1293	0/0:27,0:27:81.28:0,81,1280	1/1:1,7:8:13.13:53,13,0	1/1:1,5:6:10.08:36,10,0	1/1:1,6:6:14.60:54,15,0	1/1:0,9:9:23.01:88,23,0	1/1:1,8:8:20.16:75,20,0	1/1:4,3:7:10.49:44,10,0	1/1:0,2:2:4.99:19,5,0	0/0:36,0:36:99:0,108,1670	1/1:0,4:4:10.82:46,11,0	1/1:8,0:7:11.16:46,11,0	1/1:13,0:13:34.12:139,34,0	1/1:7,0:7:13.37:57,13,0	1/1:1,7:7:15.28:57,15,0	1/1:1,5:6:13.34:56,13,0	1/1:0,3:3:4.99:18,5,0	1/1:2,5:7:15.66:64,16,0	1/1:4,1:5:12.61:47,13,0	1/1:10,0:10:25.96:98,26,0	1/1:1,0:1:2.60:10,3,0
chr10	44563600	.	CAA	C	2530.21	PASS	AB=0.944;AC=37;AF=0.661;AN=56;BaseQRankSum=14.064;DP=314;FS=176.498;HRun=2;HaplotypeScore=120.4783;InbreedingCoeff=0.7244;MQ=67.90;MQ0=0;MQRankSum=-13.698;QD=20.24;ReadPosRankSum=4.921;VQSLOD=-0.2507;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:4:6.65:17,7,0	0/0:12,0:12:36.12:0,36,708	0/0:19,0:19:57.19:0,57,1036	0/0:23,1:22:66.23:0,66,1264	1/1:11,1:12:18.69:79,19,0	0/0:30,0:30:90.31:0,90,1712	0/0:17,0:17:48.64:0,49,944	0/0:25,0:25:75.25:0,75,1434	0/0:27,0:27:81.28:0,81,1568	1/1:0,7:7:15.05:214,15,0	1/1:0,5:5:12.04:172,12,0	1/1:0,6:6:18.06:259,18,0	1/1:0,9:9:27.09:381,27,0	1/1:0,8:8:24.08:337,24,0	1/1:0,3:3:9.03:126,9,0	1/1:0,2:2:6.02:86,6,0	0/0:35,0:35:99:0,105,2017	1/1:0,4:4:12.04:168,12,0	0/1:7,0:6:6:30,0,6	1/1:13,0:13:27.45:92,27,0	0/1:8,0:8:6.05:6,0,9	1/1:0,7:7:18.06:241,18,0	1/1:0,5:5:9.03:118,9,0	1/1:0,3:3:6.02:85,6,0	1/1:0,5:5:15.05:214,15,0	0/1:4,1:5:2.93:49,0,3	1/1:11,0:10:17.62:53,18,0	1/1:1,0:1:1.55:4,2,0
chr10	44563699	.	GCA	G	2738.51	PASS	AB=1.000;AC=37;AF=0.740;AN=50;BaseQRankSum=10.646;DP=291;FS=92.773;HRun=0;HaplotypeScore=46.5613;InbreedingCoeff=0.7622;MQ=37.22;MQ0=44;MQRankSum=-9.517;QD=19.56;ReadPosRankSum=0.263;VQSLOD=0.0422;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,3:4:6.02:92,6,0	0/0:6,0:6:18.06:0,18,346	0/1:16,0:1:0:0,0,0	./.	1/1:1,8:9:15.05:221,15,0	0/0:15,0:15:36.12:0,36,695	0/0:26,0:23:54.19:0,54,1039	0/0:25,0:15:45.15:0,45,850	0/0:17,0:17:42.14:0,42,811	1/1:2,10:10:27.09:408,27,0	1/1:0,8:7:15.05:221,15,0	1/1:0,5:4:6.02:92,6,0	1/1:0,5:5:12.04:183,12,0	1/1:0,7:6:12.04:183,12,0	1/1:0,10:9:15.05:229,15,0	1/1:0,4:4:6.01:92,6,0	0/0:41,0:41:99:0,120,2283	1/1:1,2:2:3.01:46,3,0	1/1:2,4:5:12.02:161,12,0	1/1:0,7:4:6.02:84,6,0	./.	1/1:1,7:5:12.04:176,12,0	1/1:0,8:6:9.03:130,9,0	./.	1/1:1,7:7:9.03:137,9,0	1/1:0,7:6:18.06:275,18,0	1/1:1,7:5:9.03:138,9,0	1/1:1,4:4:3.01:46,3,0
chr10	44563728	.	C	CTTG	1694.12	PASS	AC=28;AF=0.636;AN=44;BaseQRankSum=8.314;DP=313;FS=65.071;HRun=0;HaplotypeScore=48.1720;InbreedingCoeff=0.7139;MQ=41.86;MQ0=30;MQRankSum=-8.054;QD=15.40;ReadPosRankSum=0.376;VQSLOD=0.4802;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,2:3:3.01:64,3,0	0/0:10,0:10:24.08:0,24,371	0/0:29,0:10:24.05:0,24,368	0/0:33,0:15:45.14:0,45,645	1/1:4,8:12:6.02:128,6,0	0/0:14,0:14:36.59:0,37,550	0/0:23,0:22:57.15:0,57,842	0/0:19,0:19:42.14:0,42,644	0/0:18,0:18:45.61:0,46,670	1/1:5,8:10:15.05:322,15,0	1/1:6,4:9:9.03:160,9,0	1/1:2,3:4:3.01:64,3,0	./.	./.	1/1:3,5:7:3.01:64,3,0	1/1:2,2:4:6.02:129,6,0	0/0:40,0:40:99:0,114,1764	./.	./.	1/1:4,3:3:3.01:64,3,0	./.	1/1:5,8:10:15.05:289,15,0	1/1:3,5:6:6.02:128,6,0	./.	1/1:2,6:7:6.02:128,6,0	1/1:3,4:5:9.03:193,9,0	1/1:4,3:3:3.01:64,3,0	1/1:1,3:4:3.01:64,3,0
chr10	44566245	.	GA	G	483.50	PASS	AC=6;AF=0.375;AN=16;BaseQRankSum=3.846;DP=142;FS=1.033;HRun=5;HaplotypeScore=45.9664;MQ=70.55;MQ0=15;MQRankSum=0.647;QD=13.07;ReadPosRankSum=2.747;VQSLOD=1.5019;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	1/1:2,7:9:15.04:170,15,0	1/1:12,0:1:0.47:1,0,0	0/0:18,0:9:21.06:0,21,256	./.	0/0:20,0:20:45.15:0,45,614	0/0:23,0:23:57.19:0,57,779	0/0:25,0:24:60.20:0,60,820	0/0:19,0:19:42.10:0,42,552	./.	./.	./.	./.	./.	./.	./.	1/1:0,16:16:36.10:408,36,0	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.
chr10	44567628	.	AAAT	A	1179.09	PASS	AC=4;AF=0.222;AN=18;BaseQRankSum=4.385;DP=139;FS=2.961;HRun=0;HaplotypeScore=73.7698;MQ=95.93;MQ0=0;MQRankSum=0.010;QD=32.75;ReadPosRankSum=3.521;VQSLOD=3.7950;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	1/1:0,12:11:24.08:409,24,0	0/0:13,0:13:30.10:0,30,579	0/0:15,0:14:30.06:0,30,532	./.	0/0:29,0:29:84.29:0,84,1855	0/0:8,0:8:21.07:0,21,458	0/0:28,0:28:84.27:0,84,1826	0/0:9,0:9:24.08:0,24,537	./.	./.	./.	./.	./.	./.	0/0:1,0:1:3.01:0,3,66	1/1:5,19:24:51.17:870,51,0	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.
chr10	44568140	.	A	AT	1342.75	PASS	AC=10;AF=0.833;AN=12;BaseQRankSum=-1.545;DP=144;FS=3.554;HRun=2;HaplotypeScore=16.9245;MQ=24.90;MQ0=11;MQRankSum=1.358;QD=12.67;ReadPosRankSum=1.077;VQSLOD=2.3051;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	1/1:0,14:4:5.95:61,6,0	./.	0/0:3,8:1:3:0,3,26	./.	1/1:1,17:10:14.97:170,15,0	1/1:3,7:6:3.01:43,3,0	1/1:2,30:20:54.12:718,54,0	1/1:1,30:21:30.10:430,30,0	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.
chr10	44570700	.	G	GGA	353.30	PASS	AB=0.957;AC=5;AF=0.313;AN=16;BaseQRankSum=3.879;DP=200;FS=16.739;HRun=0;HaplotypeScore=122.3219;MQ=121.41;MQ0=3;MQRankSum=1.184;QD=3.18;ReadPosRankSum=-1.386;VQSLOD=0.7707;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	1/1:4,0:4:5.85:33,6,0	0/1:44,3:36:99:182,0,657	0/1:49,4:40:99:218,0,646	./.	0/0:25,0:25:51.17:0,51,776	0/0:24,0:24:69.18:0,69,1009	0/0:22,0:21:57.18:0,57,840	0/0:15,0:15:45.15:0,45,680	./.	./.	./.	./.	./.	./.	./.	0/1:7,0:6:9.77:10,0,34	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.
chr10	44570701	.	G	GGA	277.64	PASS	AB=1.000;AC=6;AF=0.375;AN=16;BaseQRankSum=2.438;DP=199;FS=23.185;HRun=0;HaplotypeScore=123.8044;MQ=121.62;MQ0=4;MQRankSum=1.103;QD=2.52;ReadPosRankSum=-0.799;VQSLOD=0.9018;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	1/1:1,4:5:9.03:160,9,0	0/1:46,0:36:41.20:41,0,629	0/1:52,0:40:99:117,0,538	./.	0/0:24,0:24:51.17:0,51,712	0/0:24,0:24:66.19:0,66,875	0/0:21,0:20:60.16:0,60,787	0/0:15,0:15:42.13:0,42,571	./.	./.	./.	./.	./.	./.	./.	1/1:1,6:6:3.01:54,3,0	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.
chr10	44572939	.	ATT	A	2078.18	PASS	AB=0.848;AC=22;AF=0.611;AN=36;BaseQRankSum=9.023;DP=329;FS=125.587;HRun=3;HaplotypeScore=49.3575;InbreedingCoeff=0.1677;MQ=34.10;MQ0=58;MQRankSum=-6.997;QD=8.73;ReadPosRankSum=3.188;VQSLOD=-0.2434;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,10:6:15.05:228,15,0	0/0:13,0:9:9.03:0,9,173	0/0:10,0:2:6.02:0,6,116	0/1:15,0:2:5.85:6,0,52	./.	0/1:31,10:37:99:165,0,747	0/1:18,4:12:61.31:61,0,380	0/1:38,7:19:99:221,0,641	0/0:31,0:28:45.14:0,45,829	./.	./.	1/1:1,5:5:9.03:137,9,0	1/1:0,13:11:27.09:409,27,0	1/1:0,5:4:9.03:137,9,0	./.	./.	0/1:21,10:27:99:232,0,385	0/1:14,4:5:79.59:80,0,104	0/0:10,0:2:3.01:0,3,58	./.	1/1:5,2:3:6.02:91,6,0	./.	./.	1/1:4,8:8:12.04:173,12,0	./.	1/1:1,5:3:9.03:137,9,0	1/1:0,6:5:9.03:137,9,0	./.
chr10	44573058	.	TAAAACGTTAAA	T	596.88	PASS	AB=0.944;AC=5;AF=0.227;AN=22;BaseQRankSum=4.728;DP=202;FS=26.771;HRun=0;HaplotypeScore=107.6179;InbreedingCoeff=0.5536;MQ=54.94;MQ0=10;MQRankSum=-3.301;QD=19.90;ReadPosRankSum=2.437;VQSLOD=0.7109;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:13,0:13:39.13:0,39,2130	0/0:11,0:7:21.07:0,21,1069	0/0:21,0:10:17.13:0,17,1152	./.	0/0:28,0:27:69.24:0,69,3756	0/1:16,1:16:60.63:61,0,2132	0/0:29,0:23:63.22:0,63,3518	0/0:24,0:23:51.13:0,51,2679	1/1:0,5:1:3.01:106,3,0	./.	1/1:3,5:5:15.05:529,15,0	./.	./.	./.	0/0:1,0:1:3.01:0,3,171	0/0:28,1:27:63.21:0,63,3326	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.
chr10	44573291	.	A	AACACACCC	494.38	PASS	AC=2;AF=0.125;AN=16;BaseQRankSum=3.645;DP=206;FS=12.753;HRun=0;HaplotypeScore=66.7244;MQ=27.14;MQ0=53;MQRankSum=-2.562;QD=61.80;ReadPosRankSum=1.918;VQSLOD=2.5914;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	0/0:6,0:6:15.05:0,15,435	0/0:4,0:2:3.01:0,3,91	0/0:11,0:2:6.02:0,6,120	./.	0/0:35,0:29:51.18:0,51,1505	0/0:15,0:9:18.06:0,18,545	./.	0/0:17,0:13:29.68:0,30,854	./.	./.	./.	./.	./.	./.	./.	0/0:26,0:14:26.73:0,27,817	./.	./.	1/1:1,7:5:15.05:575,15,0	./.	./.	./.	./.	./.	./.	./.	./.
chr10	44573292	.	T	TCTC	168.95	PASS	AC=2;AF=0.125;AN=16;BaseQRankSum=3.919;DP=206;FS=7.091;HRun=0;HaplotypeScore=53.0613;MQ=27.40;MQ0=51;MQRankSum=-1.979;QD=21.12;ReadPosRankSum=-0.268;VQSLOD=2.4377;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	0/0:6,0:6:15.05:0,15,279	0/0:4,0:2:6:0,6,80	0/0:12,0:3:6.02:0,6,101	./.	0/0:36,0:30:54.19:0,54,1004	0/0:15,0:9:18.06:0,18,335	./.	0/0:17,0:13:30.10:0,30,543	./.	./.	./.	./.	./.	./.	./.	0/0:25,0:14:8.10:0,8,481	./.	./.	1/1:1,7:5:15.05:249,15,0	./.	./.	./.	./.	./.	./.	./.	./.
chr10	44575644	.	T	TAA	1323.87	PASS	AB=1.000;AC=5;AF=0.313;AN=16;BaseQRankSum=-3.742;DP=207;FS=4.060;HRun=10;HaplotypeScore=32.8389;MQ=64.80;MQ0=23;MQRankSum=3.003;QD=24.07;ReadPosRankSum=1.491;VQSLOD=2.2500;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	1/1:0,10:12:35.09:465,35,0	0/0:19,0:6:11.38:0,11,98	0/1:10,0:3:0.01:0,0,0	./.	0/0:22,0:19:39.06:0,39,396	0/0:13,0:12:27.05:0,27,274	0/0:28,0:24:57.11:0,57,578	0/0:20,0:13:27.03:0,27,274	./.	./.	./.	./.	./.	./.	./.	1/1:2,28:33:68.20:955,68,0	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.
chr10	44575686	.	G	GA	403.72	PASS	AB=0.875;AC=18;AF=0.529;AN=34;BaseQRankSum=6.982;DP=219;FS=27.923;HRun=0;HaplotypeScore=34.8547;InbreedingCoeff=0.5355;MQ=40.56;MQ0=20;MQRankSum=-6.519;QD=6.62;ReadPosRankSum=0.604;VQSLOD=1.5334;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,2:1:3:29,3,0	0/0:10,0:10:30.10:0,30,419	./.	0/1:21,0:3:10.90:11,0,34	./.	0/0:22,0:20:42.14:0,42,586	0/0:13,0:13:33.11:0,33,461	0/0:18,0:15:45.08:0,45,574	0/0:23,0:19:51.17:0,51,709	1/1:1,3:2:3.01:34,3,0	1/1:0,2:2:6:53,6,0	./.	1/1:3,2:3:6:54,6,0	./.	1/1:2,3:1:0.47:1,0,0	./.	0/0:27,0:27:72.24:0,72,999	./.	0/0:2,2:1:3.01:0,3,42	1/1:0,4:4:12.01:111,12,0	./.	./.	0/1:2,1:2:19.99:20,0,30	./.	1/1:0,7:7:18.02:166,18,0	1/1:5,3:3:6.01:62,6,0	./.	./.
chr10	44575687	.	GTGT	G	485.22	PASS	AB=0.750;AC=17;AF=0.500;AN=34;BaseQRankSum=6.918;DP=222;FS=38.198;HRun=0;HaplotypeScore=40.4527;InbreedingCoeff=0.6286;MQ=40.75;MQ0=20;MQRankSum=-6.194;QD=12.13;ReadPosRankSum=0.938;VQSLOD=1.2538;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,2:1:3.01:34,3,0	0/0:10,0:10:30.10:0,30,708	./.	0/0:22,0:3:9:0,9,145	./.	0/0:22,0:20:42.14:0,42,992	0/0:14,0:14:36.11:0,36,805	0/0:17,0:14:42.14:0,42,946	0/0:24,0:20:51.16:0,51,1160	1/1:1,3:2:3.01:39,3,0	1/1:0,2:2:6.01:63,6,0	./.	1/1:3,2:3:6.02:64,6,0	./.	1/1:2,3:1:3.01:35,3,0	./.	0/0:28,0:28:75.24:0,75,1722	./.	0/0:2,2:1:3.01:0,3,71	1/1:0,4:4:10.58:99,11,0	./.	./.	0/1:2,1:2:24.92:25,0,62	./.	1/1:0,7:7:18.05:196,18,0	1/1:5,3:3:6.02:72,6,0	./.	./.
chr10	44575795	.	GCA	G	506.71	PASS	AC=14;AF=0.467;AN=30;BaseQRankSum=5.992;DP=272;FS=34.463;HRun=0;HaplotypeScore=27.7001;InbreedingCoeff=0.7822;MQ=55.70;MQ0=21;MQRankSum=-6.003;QD=15.35;ReadPosRankSum=0.842;VQSLOD=1.0608;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	0/0:8,0:7:18.06:0,18,347	0/0:23,0:11:33.11:0,33,594	0/0:22,0:12:35.61:0,36,631	1/1:4,2:2:6.02:92,6,0	0/0:23,0:22:63.19:0,63,1150	0/0:28,0:28:81.28:0,81,1564	0/0:29,0:29:81.28:0,81,1547	0/0:24,0:24:72.23:0,72,1342	1/1:4,5:4:12.04:184,12,0	./.	./.	./.	./.	./.	./.	0/0:30,0:30:87.30:0,87,1640	./.	./.	1/1:2,1:1:3.01:46,3,0	1/1:0,1:1:3.01:46,3,0	1/1:3,2:2:3.01:44,3,0	1/1:0,4:2:6.02:92,6,0	./.	./.	1/1:2,3:3:9.03:138,9,0	./.	./.
chr10	44575905	.	GGCC	G	64.03	PASS	AC=6;AF=0.273;AN=22;BaseQRankSum=2.979;DP=200;FS=9.214;HRun=0;HaplotypeScore=32.2403;InbreedingCoeff=0.7394;MQ=64.96;MQ0=8;MQRankSum=-1.672;QD=21.34;ReadPosRankSum=-2.140;VQSLOD=1.3848;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/0:7,0:7:21.07:0,21,497	0/0:31,0:16:45.15:0,45,998	0/0:26,0:18:38.16:0,38,889	./.	0/0:15,0:15:41.91:0,42,970	0/0:25,0:25:72.25:0,72,1666	0/0:23,0:23:69.23:0,69,1561	0/0:24,0:24:72.25:0,72,1702	./.	./.	./.	./.	./.	1/1:0,1:1:3.01:53,3,0	./.	0/0:24,0:23:66.22:0,66,1537	./.	./.	1/1:0,1:1:3.01:53,3,0	./.	1/1:0,1:1:3.01:53,3,0	./.	./.	./.	./.	./.	./.
chr10	44576215	.	C	CAA	3688.33	PASS	AC=36;AF=0.692;AN=52;BaseQRankSum=11.612;DP=282;FS=33.467;HRun=0;HaplotypeScore=82.6746;InbreedingCoeff=0.8324;MQ=91.64;MQ0=1;MQRankSum=-11.388;QD=27.32;ReadPosRankSum=2.025;VQSLOD=2.1903;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,8:8:12.04:211,12,0	0/0:11,0:11:33.10:0,33,514	0/0:17,0:16:42.91:0,43,536	0/0:25,0:23:62.78:0,63,834	1/1:2,6:7:14.37:184,14,0	0/0:22,0:22:66.23:0,66,1073	0/0:15,0:15:45.15:0,45,731	0/0:21,0:21:51.14:0,51,759	0/0:20,0:20:60.16:0,60,894	1/1:0,4:3:6.02:104,6,0	1/1:0,5:4:9.03:146,9,0	1/1:0,8:8:15.05:265,15,0	1/1:1,5:5:9.03:163,9,0	1/1:0,7:5:9.03:158,9,0	1/1:3,6:6:12.04:216,12,0	1/1:1,9:8:3.01:53,3,0	0/0:13,0:13:36.12:0,36,577	1/1:0,5:5:9.03:160,9,0	1/1:0,6:5:15.05:262,15,0	1/1:0,3:3:9.03:155,9,0	1/1:0,2:2:3.01:54,3,0	1/1:4,8:12:32.94:503,33,0	./.	1/1:0,8:8:3.94:103,4,0	1/1:1,5:6:15.05:261,15,0	1/1:0,14:12:21.07:363,21,0	1/1:1,12:9:21.02:329,21,0	./.
chr10	44576228	.	AT	A	790.73	PASS	AB=1.000;AC=13;AF=0.260;AN=50;BaseQRankSum=6.646;DP=255;FS=16.747;HRun=8;HaplotypeScore=86.0279;InbreedingCoeff=0.6979;MQ=82.78;MQ0=1;MQRankSum=-6.495;QD=12.55;ReadPosRankSum=-0.472;VQSLOD=1.4760;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,7:6:8.96:74,9,0	0/0:14,0:14:42.12:0,42,496	0/0:14,0:11:15.30:0,15,145	0/1:14,0:12:3.90:4,0,74	1/1:0,5:5:14.86:117,15,0	0/0:23,0:23:60.17:0,60,712	0/0:13,0:13:30.09:0,30,362	0/0:23,0:23:60.14:0,60,682	0/0:18,0:18:47.95:0,48,500	0/0:3,0:2:5.72:0,6,30	0/0:5,0:4:3.66:0,4,21	0/0:11,0:11:25.60:0,26,128	0/0:4,0:4:8.48:0,8,41	0/0:8,0:6:5.28:0,5,33	0/0:6,0:6:10.04:0,10,51	0/0:8,0:8:0.44:0,0,9	0/0:15,0:15:42.09:0,42,477	0/0:3,0:3:2.80:0,3,13	1/1:0,6:6:18.02:171,18,0	1/1:0,3:3:9.01:84,9,0	./.	0/0:7,0:7:15.29:0,15,70	./.	0/0:7,0:7:3.74:0,4,56	0/0:6,0:4:10.99:0,11,48	1/1:0,12:12:24.03:225,24,0	1/1:0,16:12:30.04:282,30,0	./.
chr10	44576331	.	T	TGTCA	9952.61	PASS	AB=0.636;AC=39;AF=0.696;AN=56;BaseQRankSum=11.710;DP=403;FS=73.857;HRun=0;HaplotypeScore=88.0292;InbreedingCoeff=0.8641;MQ=58.61;MQ0=0;MQRankSum=-12.503;QD=37.84;ReadPosRankSum=0.200;VQSLOD=1.6967;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,3:10:6.02:153,6,0	0/0:11,0:11:30.10:0,30,530	0/0:12,0:12:27.05:0,27,405	0/0:16,0:15:15.27:0,15,462	1/1:2,18:19:24.08:613,24,0	0/0:34,0:34:96.32:0,96,1651	0/0:12,0:12:36.12:0,36,636	0/0:21,0:21:48.16:0,48,818	0/0:19,0:19:51.17:0,51,901	1/1:8,13:21:36.06:796,36,0	1/1:4,13:17:27.09:690,27,0	1/1:2,7:9:15.05:383,15,0	1/1:4,5:9:12.04:307,12,0	1/1:9,6:16:21.07:537,21,0	1/1:3,7:10:18.06:461,18,0	1/1:1,3:4:9.03:230,9,0	0/0:15,0:15:42.14:0,42,742	1/1:5,5:10:15.05:383,15,0	1/1:6,9:15:27.09:692,27,0	1/1:5,11:14:24.08:614,24,0	1/1:7,4:13:11.78:192,12,0	1/1:1,15:15:36.12:918,36,0	1/1:4,13:15:27.09:690,27,0	0/1:3,3:7:43.96:144,0,44	1/1:2,9:11:27.56:691,28,0	1/1:4,12:16:30.08:690,30,0	1/1:9,6:14:18.06:460,18,0	1/1:0,4:4:12.04:307,12,0
chr10	44576535	.	A	AGGTG	17248.96	PASS	AC=38;AF=0.704;AN=54;BaseQRankSum=11.014;DP=534;FS=18.645;HRun=0;HaplotypeScore=132.4547;InbreedingCoeff=0.9386;MQ=83.99;MQ0=0;MQRankSum=-15.601;QD=52.27;ReadPosRankSum=1.009;VQSLOD=4.4662;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:17,26:43:93.31:2205,93,0	0/0:13,0:13:39.13:0,39,717	0/0:30,0:30:75.18:0,75,1205	0/0:29,0:29:64.01:0,64,1044	1/1:7,3:10:12.01:260,12,0	0/0:25,0:25:57.19:0,57,1031	0/0:22,0:22:66.23:0,66,1196	0/0:30,0:30:72.24:0,72,1289	0/0:27,0:27:78.27:0,78,1425	1/1:5,9:14:27.09:672,27,0	1/1:3,4:8:6.02:158,6,0	1/1:2,16:19:51.18:1317,51,0	1/1:4,12:16:42.09:992,42,0	1/1:6,12:18:45.15:1126,45,0	1/1:9,20:29:69.22:1709,69,0	1/1:4,18:22:54.19:1399,54,0	0/0:28,0:28:78.27:0,78,1435	1/1:1,8:9:21.07:554,21,0	1/1:16,16:31:69.21:1559,69,0	1/1:3,6:9:21.06:499,21,0	1/1:6,15:21:45.13:1104,45,0	1/1:3,6:9:15.05:393,15,0	1/1:0,5:5:6.02:158,6,0	1/1:6,10:16:27.55:658,28,0	1/1:5,2:7:6.02:158,6,0	1/1:5,16:20:45.15:1183,45,0	1/1:7,15:22:48.08:1144,48,0	./.
chr10	44576612	.	T	TG	22274.28	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=9.287;DP=732;FS=8.110;HRun=1;HaplotypeScore=129.3341;InbreedingCoeff=0.9587;MQ=77.36;MQ0=1;MQRankSum=-12.529;QD=42.75;ReadPosRankSum=4.001;VQSLOD=3.4378;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,52:53:99:2239,141,0	0/0:13,0:13:36.12:0,36,503	0/0:27,0:27:69.20:0,69,930	0/0:25,0:24:65.99:0,66,877	1/1:1,27:28:57.67:908,58,0	0/0:28,0:28:84.28:0,84,1170	0/0:28,0:28:84.25:0,84,1138	0/0:28,0:28:81.27:0,81,1133	0/0:28,0:28:84.24:0,84,1135	1/1:2,21:23:63.17:974,63,0	1/1:1,23:24:66.22:1048,66,0	1/1:0,23:23:63.21:987,63,0	1/1:0,15:15:45.15:718,45,0	1/1:0,23:23:66.22:1049,66,0	1/1:0,31:31:90.31:1415,90,0	1/1:2,28:30:0.37:1160,0,0	0/0:34,0:34:99:0,102,1401	1/1:0,21:21:57.19:911,57,0	1/1:0,29:27:81.26:1255,81,0	1/1:1,24:25:69.15:1060,69,0	1/1:2,50:52:99:2258,147,0	1/1:0,20:19:51.17:812,51,0	1/1:0,19:19:54.10:830,54,0	1/1:0,15:15:39.13:623,39,0	1/1:0,23:23:57.19:909,57,0	1/1:1,36:37:99:1686,108,0	1/1:0,20:20:60.20:956,60,0	1/1:0,10:10:30.10:479,30,0
chr10	44576804	.	GC	G	12130.27	PASS	AC=38;AF=0.704;AN=54;BaseQRankSum=17.602;DP=512;FS=1.999;HRun=1;HaplotypeScore=170.0908;InbreedingCoeff=0.9957;MQ=74.09;MQ0=1;MQRankSum=-15.688;QD=35.99;ReadPosRankSum=2.664;VQSLOD=4.5302;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,26:24:63.21:879,63,0	0/0:13,0:13:39.13:0,39,624	0/0:23,0:23:69.22:0,69,1061	0/0:17,0:16:28.59:0,29,640	1/1:0,17:17:39.13:544,39,0	0/0:27,0:27:81.28:0,81,1292	0/0:18,0:18:54.18:0,54,863	0/0:33,0:33:96.33:0,96,1535	0/0:21,0:21:63.17:0,63,979	1/1:0,16:16:45.15:629,45,0	1/1:0,9:9:15.05:209,15,0	1/1:0,14:14:36.12:502,36,0	1/1:0,18:18:48.16:670,48,0	1/1:0,24:24:72.24:1004,72,0	1/1:0,28:28:75.25:1046,75,0	1/1:1,25:26:24.27:909,24,0	0/0:23,0:23:69.20:0,69,1076	1/1:0,10:10:27.09:377,27,0	1/1:0,21:21:54.18:755,54,0	1/1:0,16:16:42.14:585,42,0	1/1:0,17:17:36.12:503,36,0	1/1:0,15:15:36.12:502,36,0	1/1:0,10:10:21.07:293,21,0	1/1:0,11:11:27.09:377,27,0	1/1:0,14:14:36.12:502,36,0	1/1:0,29:28:84.28:1173,84,0	1/1:0,16:16:48.16:670,48,0	./.
chr10	44577165	.	T	TTCCATG	16277.26	PASS	AC=38;AF=0.704;AN=54;BaseQRankSum=14.653;DP=426;FS=4.622;HRun=0;HaplotypeScore=149.2069;InbreedingCoeff=0.9052;MQ=72.11;MQ0=0;MQRankSum=-15.045;QD=61.42;ReadPosRankSum=5.128;VQSLOD=5.1570;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,2:4:3.01:106,3,0	0/0:12,0:12:36.11:0,36,803	0/0:21,0:21:59.79:0,60,1030	0/0:23,0:23:57.11:0,57,1227	1/1:9,17:29:39.13:1271,39,0	0/0:20,0:20:57.18:0,57,1240	0/0:9,0:9:27.05:0,27,541	0/0:33,0:33:96.30:0,96,2001	0/0:24,0:24:66.22:0,66,1514	1/1:4,17:22:57.20:1900,57,0	1/1:8,12:22:33.11:1151,33,0	1/1:2,7:10:21.07:739,21,0	1/1:2,6:10:18.06:638,18,0	1/1:0,4:6:9.03:319,9,0	1/1:2,11:14:24.08:851,24,0	1/1:1,11:14:24.08:851,24,0	0/0:18,0:18:45.14:0,45,973	1/1:0,1:2:3.01:107,3,0	1/1:4,6:11:24.05:650,24,0	1/1:6,15:21:39.13:1383,39,0	./.	1/1:2,20:26:51.18:1808,51,0	1/1:5,13:19:33.11:1169,33,0	1/1:4,4:9:6.02:212,6,0	1/1:6,5:11:15.05:515,15,0	1/1:1,11:13:36.12:1223,36,0	1/1:1,12:14:27.09:957,27,0	1/1:0,4:4:12.04:426,12,0
chr10	44577608	.	G	GGT	9016.32	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=13.944;DP=408;FS=4.835;HRun=0;HaplotypeScore=111.1894;InbreedingCoeff=0.9102;MQ=49.66;MQ0=7;MQRankSum=-13.710;QD=34.02;ReadPosRankSum=2.298;VQSLOD=6.8510;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,15:19:36.12:658,36,0	0/0:12,1:11:27.09:0,27,387	0/0:6,0:5:12.02:0,12,171	0/0:8,0:8:18.05:0,18,241	1/1:2,7:7:8.82:123,9,0	0/0:21,0:21:60.20:0,60,859	0/0:18,0:18:54.17:0,54,755	0/0:22,0:22:60.20:0,60,841	0/0:30,0:30:90.30:0,90,1283	1/1:2,20:19:47.83:875,48,0	1/1:2,8:8:18.06:328,18,0	1/1:5,10:15:33.10:534,33,0	1/1:4,11:16:36.11:617,36,0	1/1:2,11:12:27.09:493,27,0	1/1:0,18:18:39.13:712,39,0	1/1:1,9:10:18.06:329,18,0	0/0:25,0:25:72.19:0,72,989	1/1:2,1:3:6.02:110,6,0	1/1:4,16:19:42.05:641,42,0	1/1:4,3:3:9.03:164,9,0	1/1:5,8:12:18.06:329,18,0	1/1:3,7:9:24.08:417,24,0	1/1:5,16:21:42.14:767,42,0	1/1:1,9:10:12.04:219,12,0	1/1:1,5:4:9.03:165,9,0	1/1:2,16:17:39.10:680,39,0	1/1:4,20:24:45.15:802,45,0	1/1:0,1:1:3.01:55,3,0
chr10	44577627	.	G	GT	1783.93	PASS	AB=0.889;AC=45;AF=0.804;AN=56;BaseQRankSum=9.155;DP=379;FS=4.749;HRun=10;HaplotypeScore=138.7087;InbreedingCoeff=0.6924;MQ=51.88;MQ0=6;MQRankSum=-10.284;QD=6.44;ReadPosRankSum=1.849;VQSLOD=1.3062;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:17:26.49:102,26,0	1/1:2,8:9:23.98:241,24,0	0/1:7,0:7:11.19:11,0,83	0/0:5,0:3:1.81:0,2,5	1/1:11,0:9:14.35:50,14,0	0/0:21,0:21:44.93:0,45,369	0/0:18,0:18:41.94:0,42,344	0/0:28,0:29:43.01:0,43,430	0/0:29,0:29:77.88:0,78,636	1/1:23,0:22:24.60:77,25,0	1/1:12,0:11:23.31:82,23,0	1/1:9,0:9:13.14:42,13,0	1/1:13,0:13:22.48:73,22,0	1/1:13,0:13:15.84:52,16,0	1/1:16,0:16:19.98:66,20,0	1/1:7,0:6:6.66:22,7,0	1/1:3,20:23:35.51:583,36,0	1/1:3,0:3:4.26:13,4,0	1/1:16,0:16:14.75:50,15,0	1/1:4,0:4:9.03:29,9,0	1/1:8,0:7:3.11:9,3,0	1/1:12,0:11:23.20:79,23,0	1/1:22,0:22:45.31:146,45,0	1/1:9,0:8:2.22:7,2,0	1/1:6,0:5:8.88:28,9,0	1/1:15,0:15:17.21:53,17,0	1/1:18,0:18:40.24:130,40,0	1/1:2,0:2:2.92:7,3,0
chr10	44577631	.	T	TGTTTTTG	21606.81	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=11.456;DP=428;FS=6.836;HRun=0;HaplotypeScore=122.5291;InbreedingCoeff=0.9079;MQ=50.84;MQ0=6;MQRankSum=-13.178;QD=75.02;ReadPosRankSum=0.210;VQSLOD=5.0974;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,9:17:42.03:1265,42,0	0/0:11,0:10:24.07:0,24,418	0/0:8,0:7:7.70:0,8,353	0/0:4,0:2:5.95:0,6,51	1/1:2,7:12:24:714,24,0	0/0:21,0:21:63.13:0,63,1409	0/0:17,0:17:51.15:0,51,1244	0/0:26,0:26:78.22:0,78,1799	0/0:30,0:30:90.25:0,90,2206	1/1:9,15:30:71.80:2487,72,0	1/1:2,10:12:30.10:1163,30,0	1/1:1,8:12:23.82:900,24,0	1/1:3,9:13:39.05:1323,39,0	1/1:3,8:12:30.03:1055,30,0	1/1:6,10:16:39.11:1395,39,0	1/1:4,3:6:18.06:667,18,0	0/0:23,0:23:66.20:0,66,1259	1/1:2,3:6:6.02:238,6,0	1/1:8,5:15:39.07:1322,39,0	1/1:0,5:8:14.97:492,15,0	1/1:3,6:9:8.86:155,9,0	1/1:2,10:15:36.11:1270,36,0	1/1:3,21:27:68.70:2562,69,0	1/1:6,4:9:9:253,9,0	1/1:3,6:13:15.03:500,15,0	1/1:4,11:18:48.12:1474,48,0	1/1:0,18:21:54.19:2134,54,0	1/1:1,2:7:6.02:238,6,0
chr10	44577867	.	GGA	G	1300.04	PASS	AB=0.629;AC=32;AF=0.571;AN=56;BaseQRankSum=7.904;DP=487;FS=10.799;HRun=0;HaplotypeScore=55.0690;InbreedingCoeff=0.2207;MQ=46.38;MQ0=36;MQRankSum=-5.519;QD=5.12;ReadPosRankSum=-1.767;VQSLOD=0.5816;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:6,7:9:92.77:93,0,155	0/0:16,0:15:45.15:0,45,858	0/0:31,0:30:84.29:0,84,1603	0/0:19,0:19:57.03:0,57,993	0/1:4,14:8:35.69:36,0,47	0/0:26,0:26:78.24:0,78,1437	0/0:25,0:25:75.23:0,75,1357	0/0:37,0:37:99:0,108,2000	0/0:30,0:30:90.29:0,90,1679	1/1:0,11:1:3.01:46,3,0	1/1:1,11:2:3.01:46,3,0	1/1:0,9:6:15.05:229,15,0	1/1:0,11:4:8.99:112,9,0	1/1:1,9:5:9.03:136,9,0	1/1:0,13:6:5.93:40,6,0	0/1:1,6:3:39.76:40,0,52	0/0:48,1:48:99:0,105,1958	1/1:1,2:2:3.01:46,3,0	0/1:8,6:6:28.29:28,0,216	0/1:4,34:11:21.97:211,0,22	0/1:13,2:13:58.53:59,0,488	1/1:0,15:3:3.01:46,3,0	1/1:1,17:8:3.01:46,3,0	1/1:0,5:4:8.98:111,9,0	1/1:1,11:5:3.01:46,3,0	0/1:3,12:4:33.82:34,0,162	0/1:5,8:4:34.31:34,0,87	1/1:0,2:1:3.01:46,3,0
chr10	44577899	.	A	AT	1994.01	PASS	AB=0.629;AC=8;AF=0.143;AN=56;BaseQRankSum=2.395;DP=595;FS=1.698;HRun=4;HaplotypeScore=82.5786;InbreedingCoeff=-0.1284;MQ=44.31;MQ0=29;MQRankSum=-3.339;QD=11.46;ReadPosRankSum=-1.624;VQSLOD=1.0668;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:6,13:16:34.89:336,0,35	0/0:17,0:15:45.10:0,45,498	0/0:24,0:18:33.07:0,33,358	0/0:16,0:13:35.82:0,36,375	0/1:3,17:11:37.88:298,0,38	0/0:28,0:28:78.22:0,78,885	0/0:21,0:21:63.18:0,63,714	0/0:33,0:33:93.25:0,93,1039	0/0:25,0:25:72.19:0,72,807	0/0:25,0:17:48.14:0,48,542	0/0:13,0:6:12.03:0,12,136	0/0:17,0:16:33.09:0,33,374	0/0:13,0:9:18.05:0,18,204	0/0:10,0:7:15.04:0,15,170	0/0:15,0:11:18.05:0,18,204	0/0:11,0:9:15.04:0,15,170	0/0:67,0:65:99:0,174,1973	0/0:6,0:6:15.04:0,15,170	0/1:9,9:8:81.01:143,0,81	0/1:7,27:12:6.97:280,0,7	0/1:23,10:31:99:305,0,528	0/0:23,0:12:24.07:0,24,272	0/0:29,0:21:36.08:0,36,399	0/0:10,0:10:21.06:0,21,238	0/0:18,0:11:21.04:0,21,227	0/1:7,15:15:59.94:387,0,60	0/1:5,17:15:31.90:353,0,32	0/1:4,2:5:28.92:29,0,90
chr10	44577987	.	T	TA	13671.38	PASS	AB=0.538;AC=39;AF=0.696;AN=56;BaseQRankSum=13.049;DP=667;FS=12.752;HRun=5;HaplotypeScore=115.6069;InbreedingCoeff=0.9101;MQ=64.93;MQ0=18;MQRankSum=-5.294;QD=30.18;ReadPosRankSum=4.301;VQSLOD=3.4624;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,18:15:45.15:592,45,0	0/0:12,0:11:30.08:0,30,322	0/0:23,0:23:57.13:0,57,599	0/0:26,0:25:40.52:0,41,461	1/1:0,18:17:51.17:671,51,0	0/0:20,0:20:51.11:0,51,540	0/0:19,0:19:57.14:0,57,612	0/0:39,0:39:99:0,108,1134	0/0:24,0:24:72.16:0,72,765	1/1:3,23:24:69.12:854,69,0	1/1:0,21:21:60.13:768,60,0	1/1:2,25:26:69.22:907,69,0	1/1:4,21:22:54.12:672,54,0	1/1:2,23:21:54.12:690,54,0	1/1:1,20:17:39.13:513,39,0	0/1:2,12:11:11.17:216,0,11	0/0:51,0:49:76.38:0,76,871	1/1:3,15:17:42.14:549,42,0	1/1:7,13:14:25.89:388,26,0	1/1:3,23:26:75.24:972,75,0	1/1:6,16:19:48.16:632,48,0	1/1:4,25:29:69.14:857,69,0	1/1:3,27:30:72.16:904,72,0	1/1:2,16:18:12.90:520,13,0	1/1:1,24:25:69.18:888,69,0	1/1:2,28:26:78.25:1017,78,0	1/1:6,26:30:72.16:908,72,0	1/1:2,4:6:10.30:155,10,0
chr10	44579630	.	A	AGC	10068.96	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=17.273;DP=601;FS=10.731;HRun=0;HaplotypeScore=133.7714;InbreedingCoeff=0.9927;MQ=63.94;MQ0=2;MQRankSum=-13.640;QD=38.43;ReadPosRankSum=3.995;VQSLOD=6.3791;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,30:28:60.20:1119,60,0	0/0:13,0:13:36.12:0,36,582	0/0:8,0:7:15.05:0,15,204	0/0:17,0:14:36.08:0,36,540	1/1:2,19:21:33.11:593,33,0	0/0:25,0:25:75.24:0,75,1200	0/0:24,0:24:72.22:0,72,1140	0/0:32,0:32:93.29:0,93,1448	0/0:25,0:25:75.26:0,75,1221	1/1:1,23:20:54.19:1044,54,0	1/1:0,11:11:21.07:397,21,0	0/0:23,0:23:66.23:0,66,1071	0/0:26,0:26:78.27:0,78,1270	0/0:32,0:32:90.29:0,90,1445	1/1:0,20:19:45.15:856,45,0	1/1:0,13:14:33.11:622,33,0	0/0:37,0:37:99:0,111,1761	1/1:0,13:12:30.10:573,30,0	1/1:0,15:15:42.13:742,42,0	1/1:1,25:23:29.86:559,30,0	1/1:1,18:19:51.17:966,51,0	0/0:29,0:29:87.24:0,87,1338	0/0:23,0:23:66.21:0,66,1042	0/0:24,0:24:72.25:0,72,1175	1/1:0,16:14:39.13:753,39,0	1/1:0,25:22:57.18:1038,57,0	1/1:0,18:16:30.10:577,30,0	1/1:0,6:6:12.04:230,12,0
chr10	44582020	.	G	GGA	7210.79	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-1.561;DP=269;FS=8.204;HRun=0;HaplotypeScore=55.8710;InbreedingCoeff=0.9001;MQ=69.50;MQ0=0;MQRankSum=-2.718;QD=37.56;ReadPosRankSum=4.266;VQSLOD=6.9272;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,19:19:39.13:713,39,0	0/0:4,0:4:12.04:0,12,182	0/0:9,0:6:17.34:0,17,205	0/0:9,0:7:15:0,15,180	1/1:0,7:7:18.06:329,18,0	0/0:7,0:7:18.05:0,18,251	0/0:13,0:13:33.09:0,33,476	0/0:3,0:3:7.07:0,7,36	0/0:20,0:20:51.13:0,51,708	1/1:3,9:13:33.09:569,33,0	1/1:0,3:3:9.03:164,9,0	1/1:1,13:14:33.11:583,33,0	1/1:0,10:9:21.07:358,21,0	1/1:0,8:8:18.06:329,18,0	1/1:0,6:7:6.02:110,6,0	1/1:0,10:10:20.89:346,21,0	0/0:12,0:12:27.08:0,27,387	1/1:0,5:5:12.04:219,12,0	1/1:0,6:6:17.80:284,18,0	1/1:0,7:6:9.03:165,9,0	1/1:3,13:16:36.10:659,36,0	1/1:0,9:8:15.05:256,15,0	1/1:0,10:10:27.09:486,27,0	1/1:0,8:7:11.86:207,12,0	1/1:0,7:7:15.05:274,15,0	1/1:0,14:14:42.10:677,42,0	1/1:1,14:15:21.07:382,21,0	1/1:2,0:2:6.02:101,6,0
chr10	44582139	.	GA	G	6424.06	PASS	AB=0.739;AC=40;AF=0.714;AN=56;BaseQRankSum=9.009;DP=334;FS=4.194;HRun=8;HaplotypeScore=35.8334;InbreedingCoeff=0.8047;MQ=62.46;MQ0=1;MQRankSum=0.554;QD=25.09;ReadPosRankSum=2.799;VQSLOD=5.2627;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,14:14:36.06:348,36,0	0/0:3,0:3:9.03:0,9,109	0/1:8,1:5:14.07:14,0,96	0/0:2,0:2:5.88:0,6,51	1/1:0,11:11:33.05:319,33,0	0/0:6,0:6:18.06:0,18,217	0/0:15,0:14:36.11:0,36,435	0/0:18,0:18:39.12:0,39,471	0/0:18,0:18:48.13:0,48,567	1/1:1,15:16:45.06:428,45,0	1/1:0,15:15:45.07:435,45,0	1/1:0,8:8:18.03:174,18,0	1/1:0,10:10:18.03:174,18,0	1/1:0,19:19:57.09:550,57,0	1/1:0,9:9:24.04:232,24,0	1/1:0,8:8:24.04:232,24,0	0/0:13,2:15:10.14:0,10,406	0/1:3,8:11:4.13:179,0,4	1/1:0,14:14:39.06:377,39,0	1/1:3,11:14:16.28:298,16,0	1/1:1,21:22:60.10:579,60,0	1/1:1,8:9:24.04:232,24,0	1/1:0,16:16:45.07:435,45,0	1/1:0,10:10:30.05:290,30,0	1/1:0,9:9:27.04:261,27,0	1/1:0,13:13:39.06:377,39,0	1/1:0,11:11:30.05:290,30,0	1/1:1,7:8:21.03:203,21,0
chr10	44583213	.	GC	G	10352.50	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=10.897;DP=552;FS=2.686;HRun=9;HaplotypeScore=94.7473;InbreedingCoeff=0.9962;MQ=65.18;MQ0=2;MQRankSum=-0.647;QD=23.11;ReadPosRankSum=3.544;VQSLOD=5.3294;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,21:23:63.03:576,63,0	1/1:1,11:12:30.01:275,30,0	1/1:4,9:12:23.04:195,23,0	0/0:15,0:14:26.23:0,26,288	1/1:3,25:28:68.79:607,69,0	0/0:24,0:24:66.20:0,66,761	0/0:18,0:18:48.14:0,48,554	0/0:22,1:23:17.65:0,18,438	0/0:23,0:24:63.01:0,63,697	1/1:5,22:27:72.03:653,72,0	1/1:2,29:31:75.04:687,75,0	1/1:2,13:15:41.92:373,42,0	1/1:2,17:19:45.02:411,45,0	1/1:1,16:17:48.03:439,48,0	1/1:0,14:14:39.02:357,39,0	1/1:2,18:20:48.02:439,48,0	1/1:1,15:16:45.02:412,45,0	1/1:2,14:16:42.02:384,42,0	1/1:3,16:17:45.01:408,45,0	1/1:1,24:25:69.03:631,69,0	1/1:3,16:19:51.01:462,51,0	1/1:5,19:24:57.02:520,57,0	1/1:0,19:19:54.03:494,54,0	1/1:2,9:11:27.01:247,27,0	1/1:2,18:20:51.03:467,51,0	1/1:4,24:28:69.03:631,69,0	1/1:3,17:20:51.02:464,51,0	1/1:4,8:12:24:220,24,0
chr10	44583922	.	T	TA	2523.82	PASS	AB=0.613;AC=11;AF=0.204;AN=54;BaseQRankSum=10.775;DP=740;FS=37.403;HRun=1;HaplotypeScore=162.9910;InbreedingCoeff=0.6601;MQ=52.37;MQ0=11;MQRankSum=-7.366;QD=23.15;ReadPosRankSum=1.517;VQSLOD=0.9631;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,1:39:72.23:0,72,931	0/1:9,10:17:99:311,0,263	0/0:36,0:21:60.18:0,60,764	0/0:37,0:24:66.17:0,66,811	0/0:29,0:26:60.13:0,60,754	0/0:34,0:34:66.08:0,66,814	0/0:34,0:34:84.24:0,84,1061	0/0:30,0:29:75.24:0,75,963	0/0:29,0:29:66.21:0,66,854	0/0:50,0:44:99:0,123,1523	0/0:29,0:27:54.17:0,54,665	1/1:0,9:6:18.06:269,18,0	1/1:1,9:6:18.06:269,18,0	1/1:2,10:10:27.09:404,27,0	0/0:44,0:40:84.26:0,84,1021	0/0:31,0:30:57.18:0,57,692	0/1:10,25:34:99:895,0,257	0/0:16,0:13:30.09:0,30,375	0/0:23,0:21:51.17:0,51,661	0/0:26,2:25:60.20:0,60,778	0/0:25,0:25:66.12:0,66,818	0/1:4,8:10:11.91:257,0,12	1/1:4,8:9:21.03:289,21,0	./.	0/0:26,0:26:63.20:0,63,773	0/0:45,0:42:99:0,105,1341	0/0:32,0:28:63.20:0,63,815	0/0:12,0:12:35.14:0,35,435
chr10	44583944	.	TGACAGAGTATAG	T	1758.93	PASS	AC=10;AF=0.185;AN=54;BaseQRankSum=7.631;DP=764;FS=36.979;HRun=0;HaplotypeScore=298.9095;InbreedingCoeff=0.9682;MQ=67.42;MQ0=1;MQRankSum=-7.365;QD=37.42;ReadPosRankSum=1.365;VQSLOD=1.9708;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:48:90.31:0,90,5528	0/0:20,0:19:39.13:0,39,2288	0/0:30,0:29:87.30:0,87,4666	0/0:29,0:28:83.77:0,84,4096	0/0:25,0:25:60.16:0,60,3512	0/0:31,0:31:69.22:0,69,3558	0/0:31,0:31:93.30:0,93,5181	0/0:32,0:32:93.31:0,93,4997	0/0:29,0:29:66.21:0,66,3824	0/0:59,0:53:99:0,154,8996	0/0:32,0:30:78.22:0,78,4633	1/1:3,5:5:11.99:327,12,0	1/1:3,7:6:12.04:419,12,0	1/1:6,2:7:11.84:157,12,0	0/0:46,0:45:93.32:0,93,5729	0/0:35,0:34:68.07:0,68,4096	0/0:41,0:41:99:0,105,6190	0/0:21,0:19:48.16:0,48,2816	0/0:24,0:23:54.19:0,54,3026	0/0:26,0:24:66.18:0,66,3679	0/0:29,0:29:87.26:0,87,5102	1/1:5,7:10:18.06:610,18,0	1/1:5,4:7:12.04:409,12,0	./.	0/0:33,0:32:53.47:0,53,5588	0/0:47,0:45:62.98:0,63,6262	0/0:33,0:30:69.24:0,69,4117	0/0:15,0:15:42.03:0,42,2591
chr10	44583963	.	GA	G	347.57	PASS	AC=10;AF=0.185;AN=54;BaseQRankSum=7.230;DP=737;FS=45.746;HRun=1;HaplotypeScore=137.4829;InbreedingCoeff=0.9255;MQ=68.37;MQ0=2;MQRankSum=-6.883;QD=10.53;ReadPosRankSum=2.179;VQSLOD=-0.6523;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:96.28:0,96,1503	0/0:18,0:16:45.13:0,45,692	0/0:34,0:33:98.15:0,98,1392	0/0:23,0:23:69.23:0,69,1055	0/0:21,0:20:60.15:0,60,909	0/0:21,0:21:54.15:0,54,812	0/0:24,0:24:69.18:0,69,1051	0/0:34,0:34:96.28:0,96,1454	0/0:22,0:22:57.19:0,57,910	0/0:52,0:47:99:0,141,2223	0/0:32,0:31:84.29:0,84,1327	1/1:0,5:3:9.01:86,9,0	1/1:4,6:4:11.99:106,12,0	1/1:0,3:1:3:29,3,0	0/0:52,0:49:99:0,102,1617	0/0:36,0:36:63.16:0,63,1003	0/0:43,0:43:99:0,105,1652	0/0:24,0:23:51.17:0,51,815	0/0:27,0:27:63.21:0,63,993	0/0:25,0:24:69.24:0,69,1103	0/0:38,0:38:99:0,102,1630	1/1:1,7:7:18.02:168,18,0	1/1:3,4:6:12.02:115,12,0	./.	0/0:41,0:39:99:0,105,1668	0/0:37,0:36:90.31:0,90,1438	0/0:35,0:31:66.23:0,66,1053	0/0:17,0:17:51.17:0,51,815
chr10	44586731	.	T	TGGG	3839.50	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=0.371;DP=631;FS=25.980;HRun=7;HaplotypeScore=113.8820;InbreedingCoeff=0.9953;MQ=66.01;MQ0=0;MQRankSum=-1.592;QD=36.92;ReadPosRankSum=-1.019;VQSLOD=1.0889;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:96.70:0,97,1262	0/0:11,0:11:30.08:0,30,392	0/0:28,0:27:56.98:0,57,693	0/0:20,0:19:42.07:0,42,500	0/0:33,0:32:60.74:0,61,822	0/0:22,0:22:63.19:0,63,842	0/0:22,0:22:51.13:0,51,680	0/0:36,0:37:87.17:0,87,1106	0/0:16,0:16:36.10:0,36,491	0/0:22,0:22:60.19:0,60,819	0/0:25,0:25:63.18:0,63,828	1/1:3,8:11:15.05:311,15,0	1/1:2,8:12:24.08:497,24,0	1/1:3,15:20:36.10:688,36,0	0/0:26,0:26:78.25:0,78,1048	0/0:18,0:18:51.17:0,51,696	0/0:24,0:24:63.19:0,63,842	0/0:21,0:21:54.13:0,54,716	0/0:17,0:17:42.11:0,42,558	0/0:31,0:31:90.28:0,90,1211	0/0:33,0:33:87.22:0,87,1136	1/1:1,14:19:36.35:688,36,0	1/1:4,15:21:44.35:846,44,0	1/1:4,17:21:39.61:809,40,0	0/0:16,0:16:41.93:0,42,545	0/0:31,0:31:81.25:0,81,1098	0/0:23,0:23:57.14:0,57,741	0/0:7,0:7:21.07:0,21,287
chr10	44587861	.	G	GT	12099.18	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-10.370;DP=604;FS=8.999;HRun=9;HaplotypeScore=59.1721;InbreedingCoeff=0.9952;MQ=83.98;MQ0=0;MQRankSum=-4.935;QD=24.90;ReadPosRankSum=3.280;VQSLOD=5.4332;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,20:25:65.68:673,66,0	1/1:1,2:17:40.25:245,40,0	0/0:21,0:22:45.62:0,46,374	0/0:15,0:15:32.98:0,33,285	1/1:5,34:38:93.13:989,93,0	0/0:21,0:21:59.97:0,60,517	0/0:12,0:12:26.98:0,27,234	0/0:21,0:21:53.94:0,54,459	0/0:27,0:27:77.96:0,78,673	1/1:7,24:32:51.96:767,52,0	1/1:1,14:15:36.10:398,36,0	1/1:0,19:19:54.15:597,54,0	1/1:3,16:19:48.11:522,48,0	1/1:6,15:21:45.12:498,45,0	1/1:2,13:15:16.06:405,16,0	1/1:2,19:22:54.09:583,54,0	1/1:1,1:24:51.13:255,51,0	1/1:0,17:17:48.11:521,48,0	1/1:3,10:14:32.90:334,33,0	1/1:6,33:34:84.11:890,84,0	1/1:2,11:13:33.09:365,33,0	1/1:3,23:26:40.12:671,40,0	1/1:6,23:29:60.15:654,60,0	1/1:1,17:19:54.14:591,54,0	1/1:1,26:27:49.11:757,49,0	1/1:1,16:18:27.92:519,28,0	1/1:7,22:29:60.16:664,60,0	1/1:0,7:7:18.05:199,18,0
chr10	44588540	.	TGACA	T	17398.61	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=11.624;DP=583;FS=7.349;HRun=0;HaplotypeScore=116.7180;InbreedingCoeff=0.9588;MQ=64.79;MQ0=25;MQRankSum=-2.666;QD=40.94;ReadPosRankSum=6.275;VQSLOD=4.8927;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,26:26:51.14:988,51,0	1/1:1,6:7:12.04:227,12,0	0/0:16,0:4:9.03:0,9,211	0/0:34,0:17:26.57:0,27,533	1/1:8,20:24:51.16:941,51,0	0/0:29,0:29:87.30:0,87,2347	0/0:20,0:19:57.19:0,57,1519	0/0:35,0:35:99:0,102,2748	0/0:23,0:23:69.24:0,69,1858	1/1:2,21:22:60.19:1122,60,0	1/1:3,25:26:66.11:1256,66,0	1/1:3,15:17:36.12:696,36,0	1/1:2,18:21:48.16:930,48,0	1/1:1,12:12:33.11:639,33,0	1/1:0,21:20:48.16:930,48,0	1/1:3,23:24:60.21:1163,60,0	1/1:0,20:20:45.15:872,45,0	1/1:0,4:4:6.02:116,6,0	1/1:0,9:8:24.08:459,24,0	1/1:3,15:17:24.08:465,24,0	1/1:1,20:21:51.17:989,51,0	1/1:0,17:17:27.09:523,27,0	1/1:2,19:19:34.40:695,34,0	1/1:1,18:18:42.14:814,42,0	1/1:5,15:14:30.10:582,30,0	1/1:2,34:35:96.29:1773,96,0	1/1:1,19:19:41.85:814,42,0	1/1:1,6:7:21.07:404,21,0
chr10	44588646	.	CT	C	9683.60	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=9.302;DP=510;FS=3.482;HRun=9;HaplotypeScore=50.7443;InbreedingCoeff=0.9756;MQ=69.73;MQ0=0;MQRankSum=-2.715;QD=23.28;ReadPosRankSum=3.131;VQSLOD=5.7248;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,16:22:39.01:357,39,0	1/1:0,8:8:24.01:220,24,0	0/0:13,0:12:24.07:0,24,270	0/0:10,0:10:24.07:0,24,275	1/1:5,25:30:72.03:659,72,0	0/0:22,0:22:60.18:0,60,692	0/0:9,0:9:24.07:0,24,277	0/0:20,1:21:35.71:0,36,658	0/0:19,0:19:51.15:0,51,589	1/1:3,19:22:57.03:522,57,0	1/1:1,21:22:63.03:576,63,0	1/1:2,14:16:7.40:322,7,0	1/1:0,13:13:36.01:329,36,0	1/1:1,15:16:42.02:384,42,0	1/1:1,14:15:36.02:330,36,0	1/1:1,19:20:57.03:522,57,0	1/1:0,19:19:51.03:467,51,0	1/1:1,12:13:30.01:275,30,0	1/1:4,18:22:54.02:494,54,0	1/1:4,35:40:75.48:932,75,0	1/1:1,12:13:33.02:302,33,0	1/1:1,12:13:36.02:330,36,0	1/1:2,21:23:59.89:549,60,0	1/1:0,4:4:12.01:110,12,0	1/1:1,19:20:57.02:522,57,0	1/1:2,24:26:72.03:659,72,0	1/1:3,22:25:60.02:549,60,0	1/1:1,11:12:30.02:275,30,0
chr10	44589269	.	C	CATA	2640.02	PASS	AB=0.993;AC=24;AF=0.429;AN=56;BaseQRankSum=5.597;DP=632;FS=11.981;HRun=0;HaplotypeScore=180.5945;InbreedingCoeff=0.7452;MQ=54.81;MQ0=5;MQRankSum=-3.317;QD=8.86;ReadPosRankSum=1.772;VQSLOD=2.4518;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:17.05:0,17,120	0/1:8,0:8:0:0,0,0	0/0:28,0:11:15.83:0,16,256	0/0:28,0:15:15.42:0,15,247	0/0:48,0:46:28.35:0,28,213	0/0:20,0:20:57.07:0,57,756	0/0:10,0:10:24.08:0,24,408	0/0:17,0:17:45.09:0,45,578	0/0:15,0:15:42.04:0,42,507	0/1:32,1:32:99:227,0,116	1/1:30,1:29:25.27:234,25,0	1/1:21,3:24:9.65:209,10,0	1/1:28,1:29:38.46:330,38,0	1/1:19,7:26:40.63:456,41,0	1/1:24,1:25:41.84:347,42,0	1/1:15,2:17:12.67:268,13,0	0/0:9,0:9:23.80:0,24,193	0/1:8,0:8:20.77:73,0,21	0/1:16,0:14:4.31:4,0,240	0/0:43,0:40:20.43:0,20,172	0/0:17,0:17:15.38:0,15,113	1/1:18,0:18:11.31:105,11,0	1/1:26,2:27:19.46:271,19,0	1/1:11,0:11:11.84:83,12,0	1/1:22,1:22:29.57:242,30,0	0/0:31,0:29:40.19:0,40,437	0/0:25,0:25:47.03:0,47,299	0/0:10,0:10:20.63:0,21,131
chr10	44589276	.	A	ATCATCATCGTCGTCGTCATTG	29943.64	PASS	AB=0.982;AC=32;AF=0.571;AN=56;BaseQRankSum=8.807;DP=620;FS=33.422;HRun=0;HaplotypeScore=391.1344;InbreedingCoeff=0.0832;MQ=46.63;MQ0=5;MQRankSum=-10.819;QD=59.89;ReadPosRankSum=1.073;VQSLOD=2.8764;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:28:3.61:1183,4,0	1/1:8,0:8:15.05:614,15,0	0/0:26,0:8:9.03:0,9,271	0/0:28,0:12:28.89:0,29,527	0/1:50,0:48:99:566,0,364	0/0:19,0:19:51.14:0,51,2256	0/0:11,0:11:29.85:0,30,1425	0/0:21,0:21:54.18:0,54,1977	0/0:15,0:15:36.09:0,36,1382	1/1:29,1:30:47.38:4066,47,0	1/1:27,1:26:13.40:1277,13,0	1/1:21,3:24:40.49:1446,40,0	1/1:27,2:28:37.88:1273,38,0	1/1:20,6:26:53.45:2919,53,0	0/1:25,1:26:29.42:1152,0,29	0/1:14,2:16:17.66:1361,0,18	0/1:9,0:9:30.13:112,0,30	0/1:8,0:8:42.67:433,0,43	0/1:18,0:16:99:996,0,301	0/1:40,0:37:72.45:1314,0,72	0/1:17,0:17:99:162,0,152	1/1:16,0:16:33.92:1614,34,0	0/1:25,2:26:35.96:1243,0,36	1/1:10,0:10:6.01:216,6,0	1/1:23,1:23:34.45:1527,34,0	0/1:31,0:29:99:2620,0,136	0/1:25,0:25:16:2590,0,16	0/1:10,0:10:15.57:1262,0,16
chr10	44589362	.	G	GCCTCA	870.32	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-1.311;DP=553;FS=0.000;HRun=0;HaplotypeScore=159.9526;InbreedingCoeff=0.9795;MQ=80.73;MQ0=0;MQRankSum=-5.179;QD=45.81;ReadPosRankSum=-0.583;VQSLOD=3.3000;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,108,2103	1/1:2,6:8:15.05:443,15,0	0/0:23,0:23:57.20:0,57,1142	0/0:23,0:21:45.15:0,45,871	0/0:22,0:21:41.99:0,42,806	0/0:29,0:29:78.27:0,78,1597	0/0:17,0:17:39.09:0,39,759	0/0:29,0:29:66.17:0,66,1274	0/0:25,0:25:72.25:0,72,1477	0/0:22,0:22:63.68:0,64,1229	0/0:16,0:15:36.12:0,36,725	0/0:15,0:15:39.13:0,39,772	0/0:15,0:15:45.15:0,45,883	0/0:22,0:22:66.23:0,66,1329	0/0:13,0:13:36.04:0,36,623	0/0:18,0:18:48.16:0,48,966	1/1:3,8:11:18.53:544,19,0	0/0:15,0:15:45.12:0,45,844	0/0:22,0:22:54.18:0,54,1079	0/0:25,0:25:60.20:0,60,1174	0/0:27,0:27:81.28:0,81,1630	0/0:11,0:11:33.10:0,33,608	0/0:15,0:15:45.15:0,45,903	0/0:24,0:24:63.22:0,63,1267	0/0:21,0:21:60.21:0,60,1205	0/0:22,0:22:60.20:0,60,1171	0/0:19,0:19:51.13:0,51,986	0/0:5,0:5:15.05:0,15,302
chr10	44589568	.	T	TTTTTA	15669.03	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=10.819;DP=501;FS=10.583;HRun=0;HaplotypeScore=117.0343;InbreedingCoeff=0.9638;MQ=53.74;MQ0=22;MQRankSum=-8.332;QD=43.77;ReadPosRankSum=2.574;VQSLOD=4.8255;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,0:20:39.08:491,39,0	1/1:1,0:8:17.89:350,18,0	0/0:19,0:7:12:0,12,211	0/0:15,0:5:11.70:0,12,205	1/1:3,0:22:51:624,51,0	0/0:29,0:29:84.21:0,84,1510	0/0:24,0:24:68.77:0,69,1210	0/0:32,0:30:84.19:0,84,1463	0/0:24,0:24:66.20:0,66,1243	1/1:2,8:13:29.75:810,30,0	1/1:2,12:23:53.91:1086,54,0	1/1:1,12:16:30.10:907,30,0	1/1:0,9:14:36.12:1022,36,0	1/1:0,13:15:36.12:1106,36,0	1/1:1,18:19:42.14:1270,42,0	1/1:0,9:10:30.10:909,30,0	1/1:0,0:16:36.12:701,36,0	1/1:1,7:10:12.04:378,12,0	1/1:2,0:18:48.05:593,48,0	1/1:0,0:28:72.18:922,72,0	1/1:0,0:13:33.07:415,33,0	1/1:0,6:10:20.99:477,21,0	1/1:0,9:15:29.68:838,30,0	1/1:0,6:7:9.50:268,10,0	1/1:0,13:14:30.10:941,30,0	1/1:0,0:21:55.31:632,55,0	1/1:1,0:25:57.13:730,57,0	1/1:2,0:6:15.05:197,15,0
chr10	44589745	.	A	ATT	10774.99	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=6.517;DP=497;FS=11.126;HRun=7;HaplotypeScore=97.9773;InbreedingCoeff=0.9662;MQ=67.28;MQ0=0;MQRankSum=-2.713;QD=28.43;ReadPosRankSum=4.995;VQSLOD=3.4401;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,1:22:54.06:500,54,0	1/1:0,0:12:30.03:278,30,0	0/0:11,0:10:21.04:0,21,229	0/0:8,0:8:11.03:0,11,113	1/1:4,0:35:84.69:782,85,0	0/0:21,0:21:54.14:0,54,629	0/0:21,0:21:57.15:0,57,664	0/0:38,0:38:93.26:0,93,1083	0/0:19,0:19:54.13:0,54,606	1/1:2,16:18:48.12:758,48,0	1/1:3,22:25:66.22:1060,66,0	1/1:1,11:12:33.11:541,33,0	1/1:0,10:12:27.09:442,27,0	1/1:3,9:12:27.09:443,27,0	1/1:2,10:12:27.09:443,27,0	1/1:4,13:17:36.12:591,36,0	1/1:3,0:14:21.02:195,21,0	1/1:2,10:12:30.10:492,30,0	1/1:7,0:20:47.88:432,48,0	1/1:6,0:31:83.53:699,84,0	1/1:0,0:9:17.92:155,18,0	1/1:0,14:14:39.09:611,39,0	1/1:2,12:14:30.10:492,30,0	1/1:2,8:11:23.57:353,24,0	1/1:2,17:20:42.14:679,42,0	1/1:1,1:14:27.04:273,27,0	1/1:0,0:25:54.06:499,54,0	1/1:2,0:7:6.01:56,6,0
chr10	44590260	.	CT	C	6570.87	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=15.298;DP=459;FS=46.832;HRun=2;HaplotypeScore=62.7309;InbreedingCoeff=0.9498;MQ=69.66;MQ0=0;MQRankSum=1.068;QD=32.53;ReadPosRankSum=1.683;VQSLOD=1.7148;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,20:21:60.19:744,60,0	0/0:7,0:7:21.07:0,21,315	0/0:17,0:17:2.70:0,3,488	0/0:10,0:10:30.10:0,30,432	1/1:0,34:34:90.28:1116,90,0	0/0:25,0:25:75.25:0,75,1119	0/0:18,0:18:51.17:0,51,764	0/0:30,0:30:81.26:0,81,1172	0/0:25,0:25:75.25:0,75,1120	0/0:12,0:12:33.08:0,33,470	0/0:11,0:11:27.09:0,27,404	0/0:11,0:11:33.11:0,33,494	0/0:7,0:7:18.04:0,18,247	0/0:7,0:7:21.07:0,21,315	0/0:6,0:6:18.06:0,18,269	0/0:5,0:5:15.05:0,15,224	0/0:24,0:24:53.39:0,53,1015	0/0:10,0:10:27.09:0,27,405	1/1:2,14:16:42.08:502,42,0	1/1:0,44:42:99:1339,108,0	1/1:1,11:12:27.08:335,27,0	0/0:7,0:7:15.05:0,15,224	0/0:13,0:13:36.12:0,36,539	0/0:4,0:4:12.04:0,12,173	0/0:8,0:8:15.05:0,15,224	1/1:1,33:34:57.71:1140,58,0	1/1:0,36:36:99:1210,102,0	1/1:0,5:5:15.05:186,15,0
chr10	44591758	.	CATATATATATATATATATATAT	C	5928.72	PASS	AB=1.000;AC=20;AF=0.417;AN=48;BaseQRankSum=6.324;DP=220;FS=31.162;HRun=0;HaplotypeScore=138.7523;InbreedingCoeff=0.3177;MQ=72.14;MQ0=3;MQRankSum=-5.254;QD=47.81;ReadPosRankSum=5.411;VQSLOD=2.2907;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:7:3.01:0,3,160	./.	0/0:7,0:7:5.61:0,6,48	0/0:13,0:6:9.03:0,9,134	0/0:6,0:6:3.01:0,3,98	0/0:2,0:2:3.01:0,3,47	0/0:5,0:5:3.01:0,3,265	0/0:9,0:9:18.06:0,18,879	./.	1/1:10,1:11:4.86:198,5,0	1/1:9,8:16:21.07:1225,21,0	0/1:12,0:12:37.16:578,0,37	0/1:7,0:7:25.59:435,0,26	0/1:16,0:16:73.78:727,0,74	1/1:5,1:6:3.01:176,3,0	1/1:3,1:4:3.01:176,3,0	0/0:15,0:15:9.03:0,9,562	1/1:4,6:10:18.53:995,19,0	./.	0/0:2,0:2:3.01:0,3,59	./.	0/1:7,0:7:13.82:145,0,14	1/1:14,0:13:12.04:595,12,0	1/1:5,0:5:3.01:152,3,0	1/1:11,4:14:9.03:528,9,0	0/0:6,0:6:8.49:0,8,409	0/0:3,0:3:3.01:0,3,47	0/0:10,0:8:9.03:0,9,478
chr10	44591773	.	ATATATATATATATATATATATAC	A	5911.40	PASS	AB=1.000;AC=18;AF=0.375;AN=48;BaseQRankSum=6.802;DP=144;FS=19.098;HRun=0;HaplotypeScore=103.1480;InbreedingCoeff=0.2227;MQ=65.93;MQ0=4;MQRankSum=-5.342;QD=77.78;ReadPosRankSum=6.193;VQSLOD=2.2611;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:2,0:1:3.01:0,3,118	./.	0/0:4,0:2:5.23:0,5,45	0/0:19,0:7:9.03:0,9,133	0/0:2,0:2:3.01:0,3,74	0/0:1,0:1:3:0,3,25	0/0:2,0:2:6.02:0,6,561	0/0:9,0:9:27.09:0,27,1227	./.	0/1:4,0:4:13.94:129,0,14	0/1:13,0:12:21.79:911,0,22	1/1:5,4:9:15.04:790,15,0	1/1:2,3:5:9.03:572,9,0	1/1:7,5:12:21.05:1014,21,0	0/1:3,0:3:11.93:127,0,12	0/1:2,0:2:11.93:127,0,12	0/0:12,0:12:12.04:0,12,517	0/1:8,0:8:11.81:714,0,12	./.	0/0:1,0:1:3.01:0,3,40	./.	1/1:1,1:2:3.01:192,3,0	1/1:0,5:4:12.04:759,12,0	1/1:2,1:3:3.01:192,3,0	0/1:10,0:9:42.06:383,0,42	0/0:4,0:4:11.98:0,12,379	0/0:1,0:1:3:0,3,25	0/0:8,0:6:12.04:0,12,493
chr10	44591795	.	AC	A	548.33	PASS	AB=1.000;AC=24;AF=0.500;AN=48;BaseQRankSum=2.355;DP=165;FS=7.707;HRun=1;HaplotypeScore=89.8347;InbreedingCoeff=0.6006;MQ=60.26;MQ0=1;MQRankSum=-3.229;QD=7.72;ReadPosRankSum=0.160;VQSLOD=0.4262;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:5,0:3:3.01:0,3,48	0/0:12,0:6:5.98:0,6,101	1/1:2,0:2:3:25,3,0	0/0:4,0:4:12.03:0,12,168	0/1:4,0:4:10.86:11,0,131	0/0:5,0:5:15.04:0,15,217	0/0:6,0:6:18.04:0,18,262	0/0:6,0:6:12.01:0,12,113	0/0:13,0:12:2.59:0,3,33	1/1:8,0:8:11.20:57,11,0	1/1:8,0:8:11.49:72,11,0	1/1:10,0:10:14.51:80,15,0	0/0:7,0:7:13.26:0,13,116	0/0:5,0:5:9.90:0,10,91	0/1:4,0:4:6.33:28,0,6	0/0:11,0:11:19.31:0,19,148	1/1:4,4:8:23.89:185,24,0	./.	./.	1/1:1,0:1:2.90:16,3,0	1/1:11,0:10:10.93:55,11,0	1/1:3,0:3:2.90:16,3,0	0/0:13,0:11:13.38:0,13,123	1/1:3,0:3:8.94:67,9,0	1/1:2,0:2:3:28,3,0	1/1:6,1:6:8.99:83,9,0
chr10	44591796	.	C	CA	807.85	PASS	AB=1.000;AC=25;AF=0.521;AN=48;BaseQRankSum=1.111;DP=172;FS=7.778;HRun=1;HaplotypeScore=91.8719;InbreedingCoeff=0.6809;MQ=56.36;MQ0=1;MQRankSum=-3.959;QD=10.23;ReadPosRankSum=0.167;VQSLOD=0.9338;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:4,0:2:3.01:0,3,42	0/0:12,0:6:10.18:0,10,93	1/1:2,1:3:3:25,3,0	0/0:4,0:4:12.03:0,12,150	0/1:5,0:5:10.81:11,0,113	0/0:5,0:5:15.04:0,15,195	0/0:6,0:6:18.04:0,18,233	0/0:6,0:6:11.31:0,11,38	0/0:13,0:12:20.80:0,21,84	1/1:6,4:10:11.61:69,12,0	1/1:3,5:8:11.71:97,12,0	1/1:6,5:11:14.72:92,15,0	0/0:7,0:7:10.86:0,11,35	0/0:5,0:5:8.79:0,9,28	1/1:3,0:4:3.68:15,4,0	0/0:11,0:11:25.78:0,26,99	1/1:7,2:9:24.03:329,24,0	./.	./.	1/1:1,0:1:2.94:18,3,0	1/1:6,6:11:11.23:65,11,0	1/1:1,2:3:2.92:17,3,0	0/0:13,0:11:16.67:0,17,61	1/1:0,3:3:8.94:87,9,0	1/1:1,2:3:3.01:47,3,0	1/1:2,5:6:9:115,9,0
chr10	44591829	.	A	ACC	11131.49	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=10.823;DP=283;FS=41.726;HRun=0;HaplotypeScore=76.2584;InbreedingCoeff=0.9431;MQ=66.61;MQ0=0;MQRankSum=-9.646;QD=51.77;ReadPosRankSum=3.475;VQSLOD=2.6579;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,6:7:18.06:353,18,0	1/1:0,7:7:21.07:414,21,0	0/0:7,0:7:18.06:0,18,294	0/0:10,0:9:23.63:0,24,357	1/1:0,14:13:33.11:650,33,0	0/0:8,0:8:21.07:0,21,343	0/0:9,0:9:24.08:0,24,392	0/0:20,0:20:60.20:0,60,979	0/0:14,0:14:42.14:0,42,685	1/1:1,14:15:45.15:832,45,0	1/1:0,13:12:33.11:645,33,0	1/1:0,11:12:30.10:589,30,0	1/1:0,9:9:27.09:532,27,0	1/1:1,11:12:30.10:587,30,0	1/1:1,17:18:51.17:1005,51,0	1/1:0,11:11:33.11:650,33,0	1/1:0,7:8:15.05:294,15,0	1/1:0,12:12:36.12:707,36,0	1/1:0,9:10:30.09:566,30,0	1/1:1,7:8:21.07:415,21,0	1/1:0,4:5:12.04:237,12,0	1/1:0,4:5:12.04:236,12,0	1/1:0,12:11:33.11:649,33,0	1/1:0,5:7:5.26:116,5,0	1/1:0,14:14:39.13:769,39,0	1/1:0,5:5:15.05:299,15,0	1/1:0,6:6:18.06:357,18,0	1/1:0,4:4:12.04:228,12,0
chr10	44594253	.	A	AATATC	27111.08	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-9.895;DP=551;FS=0.392;HRun=0;HaplotypeScore=75.0723;InbreedingCoeff=0.9782;MQ=70.83;MQ0=7;MQRankSum=-8.678;QD=64.40;ReadPosRankSum=6.176;VQSLOD=5.3623;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,16:17:42.14:1331,42,0	1/1:0,12:11:30.10:951,30,0	0/0:22,0:22:54.16:0,54,996	0/0:9,0:9:21.07:0,21,435	1/1:1,24:23:51.18:1606,51,0	0/0:19,0:19:57.20:0,57,1238	0/0:14,0:14:39.13:0,39,809	0/0:41,0:41:99:0,120,2548	0/0:25,0:25:69.24:0,69,1497	1/1:6,23:29:84.24:2379,84,0	1/1:9,16:22:51.17:1546,51,0	1/1:0,9:5:9.03:285,9,0	1/1:4,13:12:33.07:970,33,0	1/1:1,11:8:21.07:640,21,0	1/1:3,16:18:45.15:1413,45,0	1/1:2,12:13:33.11:1035,33,0	1/1:2,15:16:48.16:1435,48,0	1/1:2,6:8:18.06:539,18,0	1/1:4,6:8:24.06:557,24,0	1/1:6,21:26:69.24:2126,69,0	1/1:5,13:18:39.13:1207,39,0	1/1:4,19:19:42.14:1307,42,0	1/1:5,25:23:60.21:1869,60,0	1/1:1,13:13:33.11:1044,33,0	1/1:3,18:19:48.16:1511,48,0	1/1:2,15:16:48.15:1384,48,0	1/1:5,20:20:51.17:1595,51,0	1/1:0,7:6:12.04:381,12,0
chr10	44594731	.	TA	T	3203.82	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-0.413;DP=585;FS=15.743;HRun=8;HaplotypeScore=71.0202;InbreedingCoeff=0.9747;MQ=64.02;MQ0=4;MQRankSum=0.616;QD=23.91;ReadPosRankSum=0.749;VQSLOD=2.7132;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:84.26:0,84,1014	0/0:15,0:13:33.10:0,33,399	0/0:12,0:11:18:0,18,196	0/0:4,0:4:6.02:0,6,72	0/0:29,0:29:84.24:0,84,1002	0/0:23,0:23:57.17:0,57,688	0/0:15,0:15:42.11:0,42,495	0/0:36,0:35:84.26:0,84,1015	0/0:20,0:20:57.17:0,57,688	1/1:1,34:35:96.12:919,96,0	1/1:0,16:16:39.06:377,39,0	0/0:18,0:18:45.13:0,45,534	0/0:20,0:20:48.13:0,48,567	0/0:19,0:19:57.16:0,57,677	1/1:1,22:23:57.09:551,57,0	1/1:1,18:19:51.08:493,51,0	0/0:23,0:23:63.19:0,63,761	1/1:1,11:12:16.15:298,16,0	0/0:18,0:16:42.12:0,42,496	0/0:23,0:23:69.20:0,69,822	0/0:32,0:32:93.29:0,93,1123	0/0:18,0:18:54.17:0,54,652	0/0:14,0:14:42.13:0,42,507	0/0:22,0:22:60.18:0,60,725	1/1:1,28:29:78.13:753,78,0	0/0:18,0:18:51.16:0,51,616	0/0:32,0:32:84.26:0,84,1015	0/0:10,0:10:30.09:0,30,362
chr10	44595165	.	AT	A	3697.56	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=8.541;DP=432;FS=12.412;HRun=8;HaplotypeScore=41.8969;InbreedingCoeff=0.9675;MQ=55.69;MQ0=14;MQRankSum=0.975;QD=24.65;ReadPosRankSum=0.939;VQSLOD=3.2536;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,16:19:42.07:406,42,0	1/1:0,4:4:12.02:116,12,0	0/0:9,0:3:6.02:0,6,72	0/0:11,0:6:9.02:0,9,99	1/1:0,18:17:45.07:434,45,0	0/0:14,0:14:39.12:0,39,471	0/0:13,0:13:36.11:0,36,435	0/0:34,0:32:75.15:0,75,846	0/0:19,0:19:54.17:0,54,652	0/0:25,0:25:72.22:0,72,870	0/0:23,0:23:63.18:0,63,750	0/0:17,0:17:48.15:0,48,580	0/0:9,0:9:24.07:0,24,290	0/0:15,0:15:42.13:0,42,507	0/0:10,0:10:27.08:0,27,326	0/0:10,0:10:30.09:0,30,362	1/1:1,15:16:42.07:406,42,0	0/0:7,0:6:15.05:0,15,181	1/1:5,10:14:30.05:290,30,0	1/1:0,19:19:57.09:550,57,0	1/1:1,10:11:30.05:290,30,0	0/0:20,0:20:51.16:0,51,616	0/0:27,0:27:72.18:0,72,844	0/0:7,0:7:21.06:0,21,254	0/0:12,0:11:27.08:0,27,316	1/1:3,11:14:33.05:319,33,0	1/1:0,18:18:51.08:492,51,0	1/1:3,13:16:42.02:395,42,0
chr10	44595383	.	TATTAGACA	T	442.01	PASS	AB=0.962;AC=8;AF=0.143;AN=56;BaseQRankSum=7.605;DP=529;FS=14.835;HRun=0;HaplotypeScore=130.9118;InbreedingCoeff=-0.1639;MQ=53.21;MQ0=8;MQRankSum=-6.466;QD=3.27;ReadPosRankSum=-0.618;VQSLOD=1.6696;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:13,0:13:99:126,0,360	0/1:9,0:7:45.90:46,0,528	0/0:14,0:7:21.07:0,21,921	0/0:9,0:7:21.07:0,21,794	0/1:24,2:22:99:100,0,1125	0/0:21,0:20:60.19:0,60,2643	0/0:11,0:11:33.11:0,33,1479	0/0:37,0:37:99:0,105,4202	0/0:14,0:14:42.14:0,42,1873	0/0:34,0:34:99:0,102,4316	0/0:24,0:24:72.25:0,72,3216	0/0:10,0:10:30.08:0,30,1152	0/0:21,0:21:63.16:0,63,2696	0/0:20,0:20:60.21:0,60,2655	0/0:22,0:22:66.21:0,66,2918	0/0:13,0:13:39.11:0,39,1480	0/1:8,0:8:37.49:37,0,620	0/0:13,0:13:36.12:0,36,1572	0/1:19,0:18:15.96:16,0,1788	0/0:40,6:41:10.65:0,11,3786	0/1:7,0:6:1.94:2,0,611	0/0:17,0:17:51.18:0,51,2168	0/0:28,0:28:84.26:0,84,3611	0/0:8,0:8:24.02:0,24,871	0/0:23,0:23:69.24:0,69,3133	0/1:16,7:20:99:147,0,1136	0/1:30,0:24:97.87:98,0,2115	0/0:9,0:3:6.02:0,6,275
chr10	44595386	.	TAGA	T	356.61	PASS	AB=0.839;AC=6;AF=0.107;AN=56;BaseQRankSum=7.270;DP=532;FS=12.068;HRun=0;HaplotypeScore=81.3458;InbreedingCoeff=-0.1190;MQ=57.27;MQ0=6;MQRankSum=-5.475;QD=2.38;ReadPosRankSum=0.938;VQSLOD=0.7757;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:6,3:10:93.14:93,0,236	0/0:6,0:4:12.04:0,12,295	0/0:15,0:9:15.09:0,15,533	0/0:9,0:8:21.07:0,21,438	0/1:17,9:22:99:201,0,603	0/0:21,0:20:60.19:0,60,1429	0/0:12,0:12:36.12:0,36,852	0/0:34,0:34:99:0,102,2405	0/0:15,0:15:42.14:0,42,1032	0/0:35,0:35:99:0,105,2512	0/0:26,0:26:78.27:0,78,1874	0/0:13,0:13:39.11:0,39,789	0/0:23,0:23:66.23:0,66,1570	0/0:21,0:21:63.22:0,63,1513	0/0:24,0:24:72.23:0,72,1677	0/0:13,0:13:39.11:0,39,842	0/0:7,0:8:12.97:0,13,328	0/0:13,0:13:36.12:0,36,846	0/1:16,1:16:5.95:6,0,982	0/1:40,7:42:5.73:6,0,2086	0/0:7,0:6:18.06:0,18,401	0/0:19,0:19:57.20:0,57,1324	0/0:28,0:28:84.29:0,84,2030	0/0:7,0:7:21.03:0,21,464	0/0:25,0:25:75.26:0,75,1799	0/1:21,5:23:99:119,0,796	0/1:22,2:18:47.90:48,0,1126	0/0:2,3:3:6.02:0,6,147
chr10	44595400	.	T	TG	230.83	PASS	AB=0.825;AC=4;AF=0.071;AN=56;BaseQRankSum=6.802;DP=520;FS=14.169;HRun=0;HaplotypeScore=65.4340;InbreedingCoeff=-0.0882;MQ=65.27;MQ0=1;MQRankSum=-6.045;QD=2.59;ReadPosRankSum=-0.226;VQSLOD=1.3270;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:11,3:14:78.56:79,0,323	0/0:6,0:5:15.05:0,15,209	0/0:16,0:16:39.04:0,39,480	0/0:11,0:11:26.95:0,27,292	0/1:16,9:21:99:149,0,542	0/0:22,0:21:63.19:0,63,850	0/0:13,0:13:36.12:0,36,500	0/0:29,0:29:84.24:0,84,1124	0/0:15,0:15:42.14:0,42,587	0/0:34,0:34:99:0,99,1358	0/0:27,0:27:81.26:0,81,1104	0/0:10,0:10:30.10:0,30,420	0/0:21,0:21:63.21:0,63,881	0/0:22,0:22:66.22:0,66,921	0/0:22,0:22:66.22:0,66,923	0/0:12,0:12:33.10:0,33,446	0/0:9,0:9:24.92:0,25,298	0/0:14,0:14:39.03:0,39,499	0/0:19,1:19:10.49:0,10,660	0/0:31,7:33:6.27:0,6,1204	0/0:7,0:6:18.06:0,18,251	0/0:17,0:17:51.17:0,51,713	0/0:27,0:27:81.22:0,81,1082	0/0:6,0:6:18.06:0,18,251	0/0:25,0:25:75.24:0,75,1033	0/1:16,5:18:88.59:89,0,536	0/1:27,2:23:23.67:24,0,709	0/0:3,5:3:6.02:0,6,83
chr10	44595898	.	A	ATT	21975.69	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-12.295;DP=649;FS=2.849;HRun=5;HaplotypeScore=63.4860;InbreedingCoeff=0.9961;MQ=69.41;MQ0=6;MQRankSum=-2.747;QD=42.18;ReadPosRankSum=5.508;VQSLOD=4.0800;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,24:27:69.24:1207,69,0	1/1:0,5:5:15.05:262,15,0	0/0:21,0:21:45.12:0,45,559	0/0:15,0:15:32.93:0,33,391	1/1:3,27:30:78.21:1328,78,0	0/0:26,0:26:72.21:0,72,903	0/0:11,0:11:33.11:0,33,420	0/0:31,0:31:72.19:0,72,882	0/0:24,0:24:63.19:0,63,802	1/1:3,36:39:99:1834,108,0	1/1:2,27:29:78.22:1299,78,0	1/1:2,23:25:57.20:997,57,0	1/1:0,16:15:39.03:681,39,0	1/1:0,20:20:45.15:787,45,0	1/1:1,15:18:36.12:630,36,0	1/1:3,26:29:40.03:1274,40,0	1/1:2,17:19:45.11:755,45,0	1/1:2,14:16:39.13:682,39,0	1/1:1,0:12:26.43:96,26,0	1/1:5,36:41:99:1814,108,0	1/1:0,22:21:57.19:984,57,0	1/1:1,20:22:60.16:1017,60,0	1/1:1,26:26:63.04:1102,63,0	1/1:0,13:13:39.13:682,39,0	1/1:2,16:18:42.14:735,42,0	1/1:3,32:34:90.31:1555,90,0	1/1:1,37:38:99:1784,102,0	1/1:0,13:14:27.09:472,27,0
chr10	44596824	.	T	TC	2119.02	PASS	AB=0.842;AC=25;AF=0.446;AN=56;BaseQRankSum=8.203;DP=565;FS=34.197;HRun=1;HaplotypeScore=128.9358;InbreedingCoeff=0.7914;MQ=75.84;MQ0=9;MQRankSum=-9.791;QD=9.42;ReadPosRankSum=1.619;VQSLOD=-0.3748;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:41:99:0,99,594	0/1:7,0:6:2.20:2,0,53	0/0:31,0:27:66.05:0,66,819	0/0:30,0:31:63.60:0,64,950	0/0:26,0:25:67.28:0,67,397	0/0:16,0:16:48.16:0,48,667	0/0:18,0:18:51.15:0,51,692	0/0:26,0:24:72.24:0,72,1003	0/0:17,0:17:48.16:0,48,666	1/1:3,30:23:44.45:481,44,0	1/1:3,18:19:22.47:223,22,0	1/1:2,0:15:30.64:157,31,0	1/1:2,1:14:22.33:118,22,0	1/1:1,1:9:18.74:103,19,0	1/1:2,17:18:21.06:254,21,0	0/1:2,19:19:17.76:219,0,18	0/0:20,0:18:38.51:0,39,227	1/1:0,4:4:6.02:69,6,0	0/0:16,0:14:40.27:0,40,214	0/0:23,0:24:35.57:0,36,315	0/0:17,0:17:46.72:0,47,274	1/1:1,1:20:36.80:227,37,0	1/1:1,1:12:14.15:82,14,0	1/1:1,1:10:8.83:45,9,0	1/1:0,21:15:30.09:347,30,0	0/0:22,0:20:57.29:0,57,297	0/0:32,0:30:77.51:0,78,454	0/1:5,0:5:8.22:8,0,41
chr10	44597235	.	GAA	G	7567.39	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-10.125;DP=641;FS=0.318;HRun=9;HaplotypeScore=101.9777;InbreedingCoeff=0.9854;MQ=67.01;MQ0=2;MQRankSum=-0.633;QD=27.12;ReadPosRankSum=2.026;VQSLOD=4.7268;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:3,0:26:49.63:0,50,174	0/0:0,0:5:7.49:0,7,26	0/0:22,0:18:47.49:0,47,603	0/0:20,0:14:36.94:0,37,494	0/0:3,0:29:62.38:0,62,220	0/0:26,0:26:72.23:0,72,1133	0/0:13,0:13:36.12:0,36,589	0/0:2,0:25:61.38:0,61,242	0/0:37,0:37:99:0,102,1614	1/1:3,31:34:93.27:1082,93,0	1/1:0,19:18:51.15:591,51,0	1/1:1,18:19:45.13:524,45,0	1/1:3,30:33:78.22:909,78,0	1/1:3,13:16:27.07:315,27,0	1/1:2,33:35:81.24:944,81,0	1/1:2,17:19:19.48:464,19,0	0/0:5,0:21:49.26:0,49,209	1/1:3,9:12:27.07:315,27,0	0/0:1,0:23:54.90:0,55,193	0/0:2,1:33:71.95:0,72,267	0/0:1,0:13:24.95:0,25,88	1/1:3,21:24:54.62:630,55,0	1/1:2,18:20:51.15:594,51,0	1/1:0,16:16:42.12:489,42,0	1/1:3,28:29:62.90:711,63,0	0/0:3,0:29:62.38:0,62,219	0/0:0,0:27:52.40:0,52,184	0/0:2,0:9:14.97:0,15,53
chr10	44597660	.	T	TA	18193.21	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=14.775;DP=600;FS=2.629;HRun=0;HaplotypeScore=105.9387;InbreedingCoeff=0.9988;MQ=66.83;MQ0=0;MQRankSum=-1.100;QD=39.29;ReadPosRankSum=6.952;VQSLOD=4.3017;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,37:37:99:1592,108,0	1/1:1,13:14:36.05:536,36,0	0/0:26,0:25:62.44:0,62,920	0/0:13,0:13:33.10:0,33,437	1/1:1,28:28:72.16:1041,72,0	0/0:16,0:16:48.16:0,48,671	0/0:14,0:14:39.13:0,39,544	0/0:44,0:44:99:0,132,1830	0/0:24,0:24:72.22:0,72,986	1/1:0,19:18:54.10:740,54,0	1/1:0,34:34:93.31:1384,93,0	1/1:1,22:23:60.12:895,60,0	1/1:1,23:24:51.09:762,51,0	1/1:0,15:15:42.14:628,42,0	1/1:0,12:12:27.09:404,27,0	1/1:0,16:16:45.15:673,45,0	1/1:0,12:12:36.12:533,36,0	1/1:1,19:20:54.18:802,54,0	1/1:1,19:18:51.02:736,51,0	1/1:0,32:32:90.30:1346,90,0	1/1:0,10:10:24.08:359,24,0	1/1:0,20:19:51.17:751,51,0	1/1:0,19:19:51.17:764,51,0	1/1:0,19:19:51.17:750,51,0	1/1:2,25:26:69.02:1022,69,0	1/1:0,22:22:63.17:909,63,0	1/1:0,30:30:81.18:1209,81,0	1/1:0,8:8:24.08:359,24,0
chr10	44598221	.	GTATATATATATA	G	946.43	PASS	AB=0.833;AC=18;AF=0.391;AN=46;BaseQRankSum=6.315;DP=269;FS=50.527;HRun=0;HaplotypeScore=115.6644;InbreedingCoeff=0.6010;MQ=49.39;MQ0=5;MQRankSum=-3.984;QD=8.45;ReadPosRankSum=0.489;VQSLOD=0.1805;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:30.09:0,30,715	./.	0/0:12,0:4:8.98:0,9,109	0/0:15,0:5:6.36:0,6,147	0/0:8,0:8:18.03:0,18,350	0/0:3,0:3:6.02:0,6,266	0/0:5,0:5:12.04:0,12,368	0/0:17,0:17:45.15:0,45,1850	0/0:6,0:6:18.06:0,18,632	1/1:8,9:16:12.01:197,12,0	1/1:5,0:9:2.99:24,3,0	1/1:2,8:10:6.02:86,6,0	1/1:3,9:12:3.01:35,3,0	1/1:3,7:10:3.01:54,3,0	1/1:7,0:15:8.95:96,9,0	1/1:7,0:10:6.01:75,6,0	1/1:5,1:8:9.03:201,9,0	0/1:5,0:10:36.86:337,0,37	0/0:5,0:4:6.02:0,6,185	0/0:9,0:9:21.02:0,21,429	0/0:5,0:5:9.03:0,9,283	./.	./.	./.	./.	0/1:8,0:8:1.97:2,0,559	0/0:6,0:5:12.04:0,12,312	0/0:13,0:12:30.08:0,30,820
chr10	44598401	.	AAAG	A	3186.86	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=2.065;DP=484;FS=10.915;HRun=0;HaplotypeScore=100.8312;InbreedingCoeff=0.9649;MQ=53.75;MQ0=2;MQRankSum=-3.987;QD=30.06;ReadPosRankSum=2.940;VQSLOD=3.7508;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:42.20:0,42,1518	0/0:12,0:12:33.11:0,33,721	0/0:9,0:4:6.02:0,6,112	0/0:18,0:12:23.70:0,24,435	0/0:12,0:12:33.11:0,33,721	0/0:15,0:15:36.12:0,36,786	0/0:4,0:4:12.04:0,12,262	0/0:23,0:21:60.21:0,60,1303	0/0:8,0:8:18.06:0,18,394	0/0:36,0:36:99:0,99,2078	0/0:29,0:29:72.25:0,72,1553	1/1:1,16:17:48.16:761,48,0	1/1:5,8:13:18.06:285,18,0	1/1:2,13:12:21.07:333,21,0	0/0:28,0:28:75.21:0,75,1552	0/0:16,0:16:45.15:0,45,982	0/0:15,0:15:42.14:0,42,886	0/0:19,0:19:42.10:0,42,853	0/0:13,0:11:33.11:0,33,721	0/0:19,0:19:57.18:0,57,1196	0/0:10,0:10:27.09:0,27,570	1/1:1,19:20:39.05:618,39,0	1/1:3,18:21:45.15:711,45,0	1/1:2,18:19:42.14:665,42,0	0/0:23,0:23:63.22:0,63,1348	0/0:19,0:19:54.19:0,54,1172	0/0:16,0:16:36.59:0,37,785	0/0:5,0:5:15.05:0,15,328
chr10	44598523	.	GT	G	4081.16	PASS	AB=0.529;AC=23;AF=0.411;AN=56;BaseQRankSum=-2.785;DP=560;FS=4.480;HRun=10;HaplotypeScore=119.6245;InbreedingCoeff=0.9368;MQ=55.81;MQ0=2;MQRankSum=-2.553;QD=16.59;ReadPosRankSum=2.981;VQSLOD=3.2634;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,1:30:65.99:0,66,677	0/0:0,0:2:5.68:0,6,28	0/0:12,0:5:12.03:0,12,125	0/0:11,0:8:12.01:0,12,118	0/0:14,0:14:39.09:0,39,416	0/0:28,0:28:69.19:0,69,763	0/0:10,0:10:27.07:0,27,299	0/0:39,0:38:90.21:0,90,978	0/0:20,0:20:48.13:0,48,531	1/1:5,29:31:68.98:599,69,0	1/1:1,19:19:35.96:312,36,0	1/1:0,21:21:38.99:339,39,0	1/1:2,14:16:32.91:286,33,0	0/1:2,16:18:0.21:227,0,0	1/1:2,19:21:38.99:338,39,0	1/1:0,17:17:29.99:260,30,0	0/0:2,0:22:33.10:0,33,223	1/1:2,18:19:47.99:417,48,0	0/0:17,0:16:30.08:0,30,332	0/0:23,0:23:54.14:0,54,590	0/0:14,0:16:38.90:0,39,399	1/1:3,17:19:35.95:312,36,0	1/1:3,22:24:47.98:417,48,0	1/1:0,19:18:32.99:286,33,0	1/1:2,13:15:32.98:286,33,0	0/0:25,1:25:40.13:0,40,663	0/0:33,2:34:39.05:0,39,860	0/0:8,0:8:18.02:0,18,187
chr10	44599161	.	T	TGG	17580.33	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=13.021;DP=516;FS=19.614;HRun=0;HaplotypeScore=125.4162;InbreedingCoeff=0.9669;MQ=46.70;MQ0=9;MQRankSum=-8.758;QD=50.52;ReadPosRankSum=2.051;VQSLOD=3.7934;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,28:30:69.24:1399,69,0	0/0:10,0:10:30.10:0,30,478	0/0:16,0:9:27.09:0,27,429	0/0:15,0:8:9.06:0,9,248	1/1:2,17:19:39.13:782,39,0	0/0:31,0:31:90.30:0,90,1444	0/0:16,0:15:39.13:0,39,636	0/0:30,0:28:84.29:0,84,1356	0/0:28,0:28:78.27:0,78,1263	1/1:2,14:14:39.13:770,39,0	1/1:3,19:21:60.20:1176,60,0	1/1:2,13:16:42.14:842,42,0	1/1:1,9:10:24.08:481,24,0	1/1:1,15:15:45.15:907,45,0	1/1:0,15:16:48.16:965,48,0	1/1:0,9:9:18.06:365,18,0	0/0:22,0:22:60.20:0,60,974	1/1:0,6:6:15.05:302,15,0	1/1:1,6:6:18.06:365,18,0	1/1:2,30:33:93.27:1783,93,0	1/1:0,15:16:39.13:749,39,0	1/1:1,25:23:57.15:1113,57,0	1/1:2,25:26:72.24:1421,72,0	1/1:0,4:5:6:122,6,0	1/1:3,11:14:36.12:723,36,0	1/1:1,21:20:60.21:1194,60,0	1/1:1,25:26:75.26:1511,75,0	1/1:0,10:10:30.10:609,30,0
chr10	44599999	.	GT	G	2977.28	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=5.393;DP=423;FS=2.481;HRun=12;HaplotypeScore=89.8980;InbreedingCoeff=0.9523;MQ=55.17;MQ0=4;MQRankSum=-0.653;QD=12.67;ReadPosRankSum=2.163;VQSLOD=3.9459;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,11:15:17.68:197,18,0	1/1:3,0:11:18.06:53,18,0	0/0:11,0:5:6.01:0,6,61	0/0:13,1:11:14.64:0,15,111	1/1:3,15:18:32.87:255,33,0	0/0:18,0:18:48.08:0,48,479	0/0:14,1:15:6.74:0,7,223	0/0:23,0:22:42.01:0,42,391	0/0:17,1:18:21.86:0,22,403	0/0:17,0:17:48.55:0,49,265	0/0:17,0:17:46.87:0,47,300	1/1:1,6:7:17.93:139,18,0	1/1:1,10:11:20.92:162,21,0	1/1:0,14:14:29.89:232,30,0	0/0:13,0:13:31.93:0,32,175	0/0:13,0:13:31.22:0,31,165	1/1:2,0:24:36.65:106,37,0	0/0:14,0:14:37.86:0,38,216	1/1:4,11:14:32.87:255,33,0	1/1:5,22:27:50.76:393,51,0	1/1:1,9:10:17.93:139,18,0	1/1:1,11:12:14.90:116,15,0	1/1:1,10:11:26.89:209,27,0	1/1:1,8:9:17.93:139,18,0	0/0:14,0:14:35.14:0,35,215	1/1:2,17:20:43.79:320,44,0	1/1:2,26:28:53.79:417,54,0	1/1:0,3:3:8.97:70,9,0
chr10	44601276	.	G	GC	25748.38	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=14.361;DP=776;FS=5.272;HRun=0;HaplotypeScore=142.7722;InbreedingCoeff=0.9968;MQ=81.47;MQ0=0;MQRankSum=-8.335;QD=43.42;ReadPosRankSum=7.965;VQSLOD=3.1864;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,44:45:99:1955,123,0	1/1:1,16:17:48.16:755,48,0	0/0:38,0:38:87.04:0,87,1291	0/0:30,0:30:90.08:0,90,1164	1/1:3,29:32:90.30:1412,90,0	0/0:25,0:25:75.25:0,75,1047	0/0:25,0:25:75.24:0,75,1030	0/0:35,0:35:99:0,105,1432	0/0:30,0:30:90.30:0,90,1255	1/1:1,35:35:99:1635,105,0	1/1:1,28:29:75.26:1199,75,0	1/1:2,32:34:90.31:1427,90,0	1/1:1,22:23:63.21:1005,63,0	1/1:1,30:31:84.29:1343,84,0	1/1:0,26:26:72.25:1151,72,0	1/1:0,25:24:72.25:1150,72,0	1/1:0,18:18:48.16:767,48,0	1/1:0,25:25:66.23:1055,66,0	1/1:0,13:13:39.13:615,39,0	1/1:0,24:24:63.21:1007,63,0	1/1:2,37:39:99:1631,102,0	1/1:2,26:28:75.26:1199,75,0	1/1:1,22:23:66.23:1053,66,0	1/1:2,21:23:57.19:911,57,0	1/1:0,21:21:54.18:863,54,0	1/1:0,38:38:99:1697,108,0	1/1:2,35:36:99:1678,105,0	1/1:0,6:6:15.05:240,15,0
chr10	44601827	.	C	CT	1303.96	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-0.600;DP=701;FS=3.185;HRun=2;HaplotypeScore=74.1690;InbreedingCoeff=0.9161;MQ=80.02;MQ0=0;MQRankSum=-2.019;QD=33.43;ReadPosRankSum=0.591;VQSLOD=3.8404;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:59,0:59:99:0,165,2021	1/1:1,15:16:39.13:562,39,0	0/0:34,0:34:81.21:0,81,1032	0/0:18,0:18:51.12:0,51,583	0/0:32,0:32:87.23:0,87,1040	0/0:30,0:30:84.26:0,84,1041	0/0:32,0:32:90.24:0,90,1078	0/0:35,0:35:99:0,105,1279	0/0:22,0:22:63.20:0,63,781	0/0:35,0:35:96.29:0,96,1179	0/0:25,0:25:72.20:0,72,867	0/0:15,0:15:45.13:0,45,545	0/0:21,0:21:57.18:0,57,705	0/0:28,0:28:84.25:0,84,1028	0/0:24,0:24:69.22:0,69,855	0/0:22,0:22:63.19:0,63,769	1/1:2,21:23:60.20:864,60,0	0/0:9,0:9:27.08:0,27,335	0/0:15,0:15:39.12:0,39,484	0/0:32,0:32:87.26:0,87,1064	0/0:37,0:37:99:0,111,1362	0/0:18,0:18:51.16:0,51,632	0/0:17,0:17:51.14:0,51,618	0/0:27,0:27:78.22:0,78,952	0/0:17,0:17:51.14:0,51,606	0/0:21,0:21:63.16:0,63,737	0/0:36,0:36:99:0,108,1337	0/0:1,0:1:3.01:0,3,37
chr10	44601953	.	G	GT	169.43	PASS	AB=0.847;AC=2;AF=0.036;AN=56;BaseQRankSum=5.674;DP=667;FS=0.000;HRun=0;HaplotypeScore=88.9262;InbreedingCoeff=-0.0392;MQ=62.82;MQ0=8;MQRankSum=-5.684;QD=2.57;ReadPosRankSum=-1.252;VQSLOD=2.2440;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:41,3:44:33.87:34,0,1500	0/0:13,0:13:39.13:0,39,540	0/0:26,0:7:18.05:0,18,234	0/0:16,0:5:15.05:0,15,194	0/0:31,0:31:93.30:0,93,1280	0/0:26,0:25:72.24:0,72,1005	0/0:25,0:25:75.25:0,75,1045	0/0:38,0:38:99:0,108,1508	0/0:17,0:17:48.16:0,48,670	0/0:31,0:31:90.29:0,90,1243	0/0:27,0:27:81.26:0,81,1115	0/0:20,0:20:57.19:0,57,786	0/0:21,0:21:60.20:0,60,835	0/0:34,0:34:99:0,99,1378	0/0:21,0:21:60.20:0,60,837	0/0:13,0:13:33.11:0,33,460	0/0:17,1:17:45.15:0,45,625	0/0:13,0:12:39.12:0,39,528	0/0:23,7:24:21.24:0,21,857	0/0:27,0:27:81.26:0,81,1116	0/1:15,7:22:99:224,0,566	0/0:23,0:23:66.22:0,66,921	0/0:22,0:22:66.21:0,66,901	0/0:17,0:17:51.17:0,51,713	0/0:26,0:26:78.26:0,78,1091	0/0:25,2:26:39:0,39,1010	0/0:29,1:29:87.26:0,87,1175	0/0:6,3:5:12.04:0,12,168
chr10	44602222	.	A	AC	11147.98	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-17.355;DP=678;FS=8.787;HRun=0;HaplotypeScore=53.5413;InbreedingCoeff=0.9736;MQ=62.01;MQ0=5;MQRankSum=1.806;QD=42.55;ReadPosRankSum=3.484;VQSLOD=5.1242;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,105,1439	0/0:14,0:14:42.14:0,42,581	0/0:26,0:6:18.03:0,18,230	0/0:23,0:5:8.86:0,9,98	0/0:28,0:28:84.28:0,84,1166	0/0:35,0:35:99:0,99,1369	0/0:23,0:23:69.21:0,69,933	0/0:29,0:28:84.28:0,84,1172	0/0:26,0:26:78.26:0,78,1090	1/1:0,35:35:96.32:1510,96,0	1/1:1,29:30:87.30:1389,87,0	1/1:0,18:18:51.17:815,51,0	1/1:0,24:24:57.19:910,57,0	1/1:0,25:25:69.24:1102,69,0	1/1:1,20:21:57.19:911,57,0	1/1:1,24:25:28.71:1014,29,0	0/0:20,0:20:60.20:0,60,839	1/1:0,6:6:15.05:240,15,0	0/0:37,0:34:99:0,99,1378	0/0:24,0:24:66.22:0,66,917	0/0:33,0:33:99:0,99,1365	1/1:0,13:13:36.12:575,36,0	1/1:1,25:26:69.05:1101,69,0	1/1:0,19:19:51.17:815,51,0	1/1:0,19:19:48.16:767,48,0	0/0:32,0:31:93.30:0,93,1286	0/0:28,0:27:81.24:0,81,1102	0/0:3,0:2:6.02:0,6,84
chr10	44602806	.	AT	A	1135.85	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.295;DP=559;FS=0.695;HRun=1;HaplotypeScore=63.4774;InbreedingCoeff=0.9939;MQ=59.96;MQ0=6;MQRankSum=-1.859;QD=30.70;ReadPosRankSum=2.353;VQSLOD=3.4038;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:75.23:0,75,1166	1/1:0,9:9:21.07:293,21,0	0/0:17,0:9:26.59:0,27,335	0/0:21,0:13:36.09:0,36,528	0/0:31,0:31:93.28:0,93,1435	0/0:16,0:16:48.16:0,48,762	0/0:16,0:16:48.15:0,48,743	0/0:30,0:30:87.29:0,87,1369	0/0:18,0:18:54.15:0,54,810	0/0:23,0:23:66.22:0,66,1037	0/0:21,0:21:63.20:0,63,984	0/0:14,0:14:42.13:0,42,646	0/0:13,0:13:39.13:0,39,621	0/0:9,0:9:24.08:0,24,384	0/0:24,0:24:72.23:0,72,1123	0/0:22,0:22:66.23:0,66,1054	1/1:1,27:28:69.23:963,69,0	0/0:25,0:25:75.15:0,75,1141	0/0:18,0:17:45.15:0,45,715	0/0:27,0:27:81.24:0,81,1267	0/0:7,0:7:21.05:0,21,311	0/0:29,0:29:84.02:0,84,1314	0/0:29,0:29:87.24:0,87,1294	0/0:13,0:13:39.13:0,39,620	0/0:14,0:14:42.14:0,42,670	0/0:24,0:24:72.25:0,72,1148	0/0:25,0:24:75.26:0,75,1196	0/0:11,0:11:33.11:0,33,522
chr10	44603679	.	C	CAA	2540.54	PASS	AB=0.842;AC=20;AF=0.370;AN=54;BaseQRankSum=13.203;DP=771;FS=3.826;HRun=1;HaplotypeScore=100.3078;InbreedingCoeff=-0.5841;MQ=55.05;MQ0=12;MQRankSum=-12.216;QD=4.36;ReadPosRankSum=1.711;VQSLOD=-0.5556;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:18,5:23:99:154,0,588	0/1:9,3:11:85.63:86,0,337	0/0:20,0:14:30.07:0,30,407	0/0:25,0:15:24.18:0,24,464	0/0:22,2:22:63.21:0,63,964	0/1:27,10:32:99:156,0,1136	0/1:14,5:18:99:240,0,409	0/0:33,1:31:81.27:0,81,1236	0/1:23,10:28:99:170,0,885	0/1:29,4:31:25.63:26,0,1195	0/1:19,5:21:58.50:58,0,701	0/1:22,10:29:99:267,0,814	0/1:26,6:31:99:223,0,969	0/1:25,8:32:99:295,0,939	0/0:25,3:26:20.40:0,20,1026	0/0:22,0:22:66.22:0,66,1010	0/1:28,10:38:99:386,0,970	0/1:27,5:31:99:199,0,1009	0/1:20,2:19:9.67:10,0,641	0/1:43,4:46:35.20:35,0,1787	0/1:28,2:30:31.33:31,0,1085	0/1:22,5:24:46.45:46,0,874	0/1:19,9:24:99:143,0,760	0/1:23,3:25:98.26:98,0,913	0/1:21,2:23:46.48:46,0,895	0/1:28,3:30:28.60:29,0,1153	0/0:34,0:34:99:0,102,1561	./.
chr10	44603780	.	CA	C	4920.90	PASS	AB=0.594;AC=11;AF=0.196;AN=56;BaseQRankSum=7.414;DP=737;FS=0.000;HRun=3;HaplotypeScore=82.4358;InbreedingCoeff=0.8852;MQ=55.60;MQ0=3;MQRankSum=3.565;QD=28.28;ReadPosRankSum=3.221;VQSLOD=4.1266;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:51.13:0,51,677	0/0:7,0:7:18.06:0,18,259	0/0:26,0:17:51.13:0,51,695	0/0:22,0:13:39.13:0,39,547	0/0:37,0:35:96.31:0,96,1364	0/0:40,0:35:96.30:0,96,1345	0/0:21,0:21:63.21:0,63,904	0/0:32,0:31:87.22:0,87,1164	0/0:32,0:29:84.26:0,84,1171	1/1:5,35:40:99:1251,102,0	1/1:2,24:25:66.21:817,66,0	0/0:17,0:16:48.16:0,48,689	0/0:23,0:23:66.20:0,66,912	0/0:29,0:28:72.16:0,72,983	1/1:7,21:26:46.23:761,46,0	1/1:4,29:33:75.71:930,76,0	0/0:20,0:20:45.15:0,45,641	0/1:6,13:19:82.91:418,0,83	0/0:26,0:24:65.83:0,66,857	0/0:29,0:26:66.21:0,66,931	0/0:26,0:25:69.18:0,69,952	0/0:27,0:27:78.26:0,78,1122	0/0:19,0:19:51.15:0,51,699	0/0:20,0:20:60.11:0,60,799	1/1:3,25:28:60.19:744,60,0	0/0:34,1:35:56.10:0,56,1228	0/0:41,0:37:99:0,105,1512	0/0:14,0:13:39.06:0,39,535
chr10	44605686	.	G	GAAATACAGTA	20569.39	PASS	AB=1.000;AC=43;AF=0.796;AN=54;BaseQRankSum=-3.987;DP=416;FS=5.260;HRun=0;HaplotypeScore=87.9081;InbreedingCoeff=0.8092;MQ=46.95;MQ0=25;MQRankSum=-10.645;QD=63.10;ReadPosRankSum=-0.665;VQSLOD=4.2706;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,5:11:21.07:987,21,0	1/1:2,0:2:3.01:152,3,0	0/1:13,0:4:3.14:3,0,98	0/0:12,0:10:29.31:0,29,712	1/1:11,17:22:33.11:1422,33,0	0/0:26,0:25:72.25:0,72,2185	0/0:9,0:8:24.07:0,24,677	0/0:20,0:20:33.11:0,33,966	0/0:15,0:15:33.11:0,33,962	1/1:9,5:13:33.09:1133,33,0	1/1:9,11:18:30.10:1525,30,0	1/1:4,7:5:12.04:610,12,0	1/1:11,6:13:21.07:928,21,0	1/1:12,4:15:15.05:521,15,0	1/1:8,7:13:21.07:889,21,0	1/1:5,4:8:9.03:455,9,0	1/1:5,4:11:12.04:565,12,0	1/1:6,4:6:8.99:326,9,0	1/1:8,1:8:18.04:558,18,0	1/1:11,14:20:48.16:2244,48,0	./.	1/1:6,7:13:30.10:1320,30,0	1/1:8,7:14:21.07:958,21,0	1/1:3,2:5:12.04:610,12,0	1/1:11,11:19:39.13:1773,39,0	1/1:10,12:20:54.18:2271,54,0	1/1:6,10:13:24.08:1166,24,0	1/1:0,1:4:3.01:153,3,0
chr10	44606061	.	GT	G	8650.08	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=14.500;DP=645;FS=4.477;HRun=7;HaplotypeScore=60.3070;InbreedingCoeff=0.9726;MQ=67.51;MQ0=0;MQRankSum=-0.479;QD=26.78;ReadPosRankSum=4.818;VQSLOD=5.4797;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,20:20:60.14:612,60,0	0/0:12,1:12:2.49:0,2,347	0/0:21,0:21:57.17:0,57,679	0/0:13,0:12:30.10:0,30,377	1/1:3,38:40:99:1010,99,0	0/0:24,0:24:63.17:0,63,757	0/0:20,0:20:54.17:0,54,679	0/0:40,0:40:99:0,108,1348	0/0:32,0:32:96.27:0,96,1185	0/0:33,0:33:90.28:0,90,1119	0/0:25,0:25:72.23:0,72,900	1/1:1,22:23:60.14:612,60,0	1/1:0,30:30:81.18:826,81,0	1/1:2,13:15:36.08:367,36,0	0/0:30,0:30:84.16:0,84,995	0/0:15,0:15:30.10:0,30,377	0/0:12,0:12:30.10:0,30,377	0/0:17,0:17:45.07:0,45,520	1/1:2,14:16:42.09:427,42,0	1/1:1,35:36:96.22:978,96,0	1/1:1,9:10:24.05:245,24,0	1/1:0,20:20:57.13:582,57,0	1/1:3,25:28:75.17:765,75,0	1/1:2,11:13:30.07:306,30,0	0/0:27,0:24:66.21:0,66,830	1/1:1,25:26:75.16:758,75,0	1/1:4,33:37:96.21:979,96,0	1/1:1,7:8:18.04:184,18,0
chr10	44606660	.	TGTG	T	394.95	PASS	AB=0.735;AC=2;AF=0.036;AN=56;BaseQRankSum=3.521;DP=722;FS=20.742;HRun=0;HaplotypeScore=111.5483;InbreedingCoeff=-0.0375;MQ=53.20;MQ0=16;MQRankSum=-5.394;QD=6.47;ReadPosRankSum=2.054;VQSLOD=1.4037;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:31:81.23:0,81,1787	0/1:16,13:23:99:301,0,771	0/0:25,0:13:39.02:0,39,761	0/0:27,0:13:33.11:0,33,737	0/0:32,0:29:63.22:0,63,1420	0/0:37,0:37:99:0,111,2520	0/0:17,0:17:48.16:0,48,1107	0/0:32,0:32:96.32:0,96,2171	0/0:29,0:29:84.29:0,84,1935	0/0:45,0:43:99:0,129,2931	0/0:29,0:28:75.21:0,75,1658	0/0:20,0:19:51.16:0,51,1132	0/0:25,0:25:72.25:0,72,1635	0/0:19,0:19:54.19:0,54,1245	0/0:32,0:29:78.25:0,78,1750	0/0:16,0:16:48.16:0,48,1100	0/1:23,9:31:99:183,0,1214	0/0:6,0:6:18.06:0,18,415	0/0:26,0:25:69.23:0,69,1542	0/0:21,0:19:51.18:0,51,1174	0/0:28,0:27:78.27:0,78,1791	0/0:21,0:21:54.19:0,54,1244	0/0:33,0:33:96.29:0,96,2092	0/0:20,0:20:57.20:0,57,1314	0/0:27,0:24:63.22:0,63,1437	0/0:31,0:26:78.22:0,78,1749	0/0:24,0:21:54.19:0,54,1225	0/0:7,0:7:21.07:0,21,475
chr10	44606799	.	T	TA	525.36	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=2.590;DP=626;FS=0.894;HRun=1;HaplotypeScore=120.2170;InbreedingCoeff=0.8165;MQ=55.48;MQ0=5;MQRankSum=-3.441;QD=18.12;ReadPosRankSum=1.131;VQSLOD=3.9340;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,1:29:18.63:0,19,703	1/1:1,10:7:12.04:180,12,0	0/0:30,0:25:66.09:0,66,796	0/0:29,0:28:81.26:0,81,1037	0/0:28,1:25:12.33:0,12,629	0/0:37,0:37:90.28:0,90,1155	0/0:17,0:17:51.10:0,51,641	0/0:35,0:35:99:0,105,1313	0/0:34,0:34:90.27:0,90,1140	0/0:25,1:21:18.76:0,19,679	0/0:13,0:12:27.09:0,27,350	0/0:19,0:17:24.08:0,24,312	0/0:22,0:22:60.08:0,60,757	0/0:15,1:16:17.99:0,18,212	0/0:16,0:16:32.97:0,33,386	0/0:15,0:15:39.07:0,39,486	1/1:0,18:15:33.04:462,33,0	0/0:6,0:6:9.03:0,9,114	0/0:20,0:16:48.16:0,48,623	0/0:28,1:25:51.16:0,51,656	0/0:19,0:19:54.18:0,54,701	0/0:21,0:16:30.10:0,30,389	0/0:25,0:22:54.16:0,54,684	0/0:19,0:19:39.13:0,39,505	0/0:28,0:22:39.07:0,39,485	0/0:27,0:26:75.24:0,75,973	0/0:25,1:24:0.11:0,0,458	0/0:8,0:8:18.06:0,18,234
chr10	44607045	.	CT	C	400.20	PASS	AB=0.740;AC=8;AF=0.182;AN=44;BaseQRankSum=2.526;DP=531;FS=0.000;HRun=1;HaplotypeScore=23.5280;InbreedingCoeff=0.2963;MQ=20.87;MQ0=241;MQRankSum=-2.084;QD=5.27;ReadPosRankSum=-1.266;VQSLOD=-0.2353;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,2:4:3.01:0,3,48	1/1:4,11:8:18.06:251,18,0	./.	./.	0/1:5,10:9:35.71:36,0,37	0/0:17,0:17:21.07:0,21,335	0/0:25,0:19:30.10:0,30,478	0/0:34,0:8:9.01:0,9,111	0/0:34,0:31:33.11:0,33,511	0/0:17,0:6:12.04:0,12,191	0/0:9,0:4:6.02:0,6,94	0/0:7,0:2:3.01:0,3,48	0/0:16,0:3:3.01:0,3,48	./.	0/0:18,0:2:3.01:0,3,48	0/0:17,0:5:3.01:0,3,48	0/0:16,0:3:3.01:0,3,48	./.	0/0:22,5:5:12.04:0,12,191	1/1:3,16:14:9.03:125,9,0	./.	0/0:19,0:10:6.02:0,6,95	0/0:18,0:11:6.02:0,6,95	./.	0/0:18,0:14:9.03:0,9,143	0/1:19,3:9:76.61:77,0,260	0/0:9,1:3:3.01:0,3,48	1/1:2,3:3:3.01:37,3,0
chr10	44608565	.	A	AT	11024.91	PASS	AB=0.585;AC=29;AF=0.518;AN=56;BaseQRankSum=-15.694;DP=728;FS=10.160;HRun=8;HaplotypeScore=84.6256;InbreedingCoeff=0.8057;MQ=78.66;MQ0=0;MQRankSum=-0.859;QD=26.00;ReadPosRankSum=1.454;VQSLOD=5.0524;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,20:25:56.87:617,57,0	1/1:2,15:17:39.12:450,39,0	0/0:25,0:26:52.79:0,53,471	0/0:20,0:20:40.27:0,40,359	0/1:13,24:37:20.85:742,0,21	0/0:24,0:24:66.03:0,66,604	0/0:22,0:22:63.03:0,63,577	0/0:31,0:31:75.01:0,75,683	0/0:28,0:28:75.03:0,75,686	0/1:8,23:31:3.20:717,0,3	1/1:5,24:29:44.99:769,45,0	0/0:24,0:24:60.02:0,60,549	0/0:19,0:19:54.03:0,54,494	0/0:22,0:22:58.58:0,59,525	1/1:1,22:23:66.20:762,66,0	1/1:3,33:36:90.27:1039,90,0	1/1:1,21:22:60.18:692,60,0	1/1:2,18:20:48.14:554,48,0	1/1:6,21:27:14.55:650,15,0	1/1:10,29:39:39.35:921,39,0	1/1:1,27:28:75.22:866,75,0	0/0:32,0:32:81.04:0,81,739	0/0:31,0:31:60.01:0,60,544	0/0:24,0:24:69.04:0,69,632	0/1:8,23:31:82.33:646,0,82	1/1:5,15:20:20.80:492,21,0	1/1:4,24:28:72.21:831,72,0	1/1:1,10:11:24.07:277,24,0
chr10	44609166	.	T	TA	9045.03	PASS	AB=0.542;AC=14;AF=0.250;AN=56;BaseQRankSum=-13.444;DP=690;FS=2.654;HRun=2;HaplotypeScore=75.0278;InbreedingCoeff=0.8117;MQ=62.98;MQ0=5;MQRankSum=2.679;QD=39.50;ReadPosRankSum=1.572;VQSLOD=5.4664;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,27:29:64.76:1140,65,0	0/0:16,0:16:39.13:0,39,545	0/0:27,0:17:40.35:0,40,505	0/0:22,0:13:24.09:0,24,417	1/1:4,38:42:27.66:1595,28,0	0/0:21,0:21:60.20:0,60,837	0/0:18,0:18:51.16:0,51,696	0/0:35,0:34:99:0,99,1356	0/0:16,0:16:45.15:0,45,629	0/0:34,0:34:93.31:0,93,1299	0/0:35,0:35:99:0,102,1405	0/0:17,0:17:51.16:0,51,698	0/0:17,0:17:48.16:0,48,671	0/0:22,0:22:66.22:0,66,923	0/0:21,0:21:63.21:0,63,881	0/0:21,0:21:63.21:0,63,881	0/0:16,0:16:42.14:0,42,585	0/0:10,0:10:30.10:0,30,409	1/1:2,20:22:22.57:864,23,0	0/1:10,33:43:99:1420,0,115	1/1:0,22:22:63.21:1007,63,0	0/0:32,0:32:78.25:0,78,1074	0/0:38,0:38:99:0,99,1367	0/0:12,0:11:33.07:0,33,440	0/0:31,0:31:84.28:0,84,1167	1/1:0,26:26:78.27:1229,78,0	1/1:0,30:31:90.31:1433,90,0	0/1:1,13:14:14.71:356,0,15
chr10	44609812	.	A	ATT	4799.15	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-8.772;DP=528;FS=4.963;HRun=8;HaplotypeScore=70.5795;InbreedingCoeff=0.9680;MQ=67.26;MQ0=0;MQRankSum=2.319;QD=31.37;ReadPosRankSum=-0.131;VQSLOD=4.8616;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,11:13:24.04:353,24,0	0/0:11,0:11:24.04:0,24,258	0/0:14,0:12:19.57:0,20,157	0/0:8,0:8:7.99:0,8,106	1/1:10,25:35:68.71:916,69,0	0/0:19,0:19:51.12:0,51,564	0/0:11,0:11:24.06:0,24,267	0/0:36,0:35:84.19:0,84,927	0/0:9,0:9:27.03:0,27,281	0/0:40,0:40:92.67:0,93,969	0/0:32,0:32:65.68:0,66,739	0/0:12,0:12:35.89:0,36,381	0/0:24,0:24:63.13:0,63,681	0/0:16,0:16:41.89:0,42,443	0/0:20,0:20:45.98:0,46,490	0/0:17,0:17:48.09:0,48,516	0/0:14,0:14:36.07:0,36,389	0/0:17,0:17:36.09:0,36,401	1/1:4,11:15:33.08:459,33,0	1/1:4,27:31:71.83:1041,72,0	1/1:0,4:4:6.02:95,6,0	0/0:26,0:26:68.64:0,69,731	0/0:17,0:17:36.70:0,37,378	0/0:14,0:14:42.09:0,42,457	0/0:17,0:17:39.09:0,39,434	1/1:7,16:23:48.12:709,48,0	1/1:3,18:21:38.03:749,38,0	1/1:1,10:11:30.10:476,30,0
chr10	44610350	.	G	GT	13985.58	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=9.959;DP=575;FS=3.419;HRun=6;HaplotypeScore=93.8072;InbreedingCoeff=0.9806;MQ=77.65;MQ0=0;MQRankSum=-1.031;QD=31.86;ReadPosRankSum=5.814;VQSLOD=4.3671;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,14:19:41.94:470,42,0	1/1:0,12:12:36.12:453,36,0	0/0:26,0:24:56.33:0,56,553	0/0:20,0:19:36.05:0,36,353	1/1:1,27:28:81.22:1001,81,0	0/0:31,0:31:81.16:0,81,819	0/0:7,0:7:12.50:0,12,123	0/0:32,0:32:90.19:0,90,912	0/0:20,0:20:60.13:0,60,606	1/1:3,31:34:86.62:1114,87,0	1/1:0,20:20:60.15:737,60,0	1/1:2,17:19:51.16:640,51,0	1/1:1,18:19:48.15:604,48,0	1/1:2,20:22:54.17:679,54,0	1/1:1,16:17:48.15:602,48,0	1/1:1,16:17:42.13:528,42,0	1/1:1,23:24:51.16:641,51,0	1/1:0,14:14:30.10:377,30,0	1/1:1,14:16:39.12:491,39,0	1/1:2,34:36:99:1227,102,0	1/1:1,17:18:45.14:566,45,0	1/1:2,17:19:48.15:604,48,0	1/1:1,13:14:8.53:422,9,0	1/1:3,11:13:27.09:340,27,0	1/1:2,24:26:60.19:755,60,0	1/1:2,17:19:51.16:642,51,0	1/1:3,21:24:63.20:790,63,0	1/1:0,8:8:24.08:302,24,0
chr10	44612244	.	G	GC	990.89	PASS	AB=0.684;AC=11;AF=0.196;AN=56;BaseQRankSum=8.176;DP=596;FS=28.128;HRun=1;HaplotypeScore=160.6252;InbreedingCoeff=0.8404;MQ=65.46;MQ0=6;MQRankSum=-8.065;QD=20.22;ReadPosRankSum=0.199;VQSLOD=1.7360;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:38:81.26:0,81,1051	0/0:18,0:17:44.30:0,44,582	0/0:22,0:21:55.28:0,55,616	0/0:17,0:16:28.19:0,28,427	0/0:20,0:20:45.15:0,45,584	0/0:24,0:24:69.22:0,69,895	0/0:21,0:21:60.15:0,60,759	0/0:33,0:33:96.31:0,96,1243	0/0:31,0:31:84.27:0,84,1085	1/1:1,9:9:24.08:330,24,0	1/1:1,6:6:15:171,15,0	0/0:16,0:16:33.11:0,33,428	0/0:22,0:21:57.18:0,57,729	0/0:27,0:27:66.21:0,66,856	1/1:1,6:6:15.05:196,15,0	0/1:7,6:10:94.82:135,0,95	0/0:20,0:19:30.10:0,30,384	1/1:0,4:3:6.02:84,6,0	0/0:25,0:19:54.16:0,54,691	0/0:28,0:28:63.20:0,63,817	0/0:49,0:45:99:0,99,1269	0/0:30,1:29:33.35:0,33,925	0/0:26,0:25:57.17:0,57,725	0/0:22,0:21:57.19:0,57,739	1/1:1,7:6:18.06:246,18,0	0/0:23,0:21:54.18:0,54,700	0/0:25,1:24:54.05:0,54,699	0/0:5,0:3:9.03:0,9,117
chr10	44612252	.	ACTT	A	336.76	PASS	AB=0.600;AC=11;AF=0.196;AN=56;BaseQRankSum=8.270;DP=571;FS=51.437;HRun=0;HaplotypeScore=172.3753;InbreedingCoeff=0.8083;MQ=74.69;MQ0=1;MQRankSum=-7.752;QD=12.03;ReadPosRankSum=2.197;VQSLOD=1.3399;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:37:87.02:0,87,1859	0/0:19,0:19:48.16:0,48,1176	0/0:29,0:29:87.30:0,87,2006	0/0:22,0:22:66.23:0,66,1533	0/0:19,0:19:48.16:0,48,1176	0/0:25,0:25:75.12:0,75,1662	0/0:22,0:22:66.23:0,66,1610	0/0:25,0:25:75.25:0,75,1777	0/0:30,0:30:90.25:0,90,2079	1/1:0,6:6:17.95:142,18,0	1/1:0,4:4:10.15:56,10,0	0/0:13,0:13:33.11:0,33,741	0/0:22,0:22:63.21:0,63,1433	0/0:25,0:25:75.26:0,75,1774	1/1:0,5:5:14.94:114,15,0	0/1:2,4:6:73.75:74,0,130	0/0:21,0:21:36.12:0,36,849	1/1:0,3:2:2.91:24,3,0	0/0:23,0:19:57.11:0,57,1348	0/0:30,0:29:72.12:0,72,1731	0/0:48,0:44:99:0,104,2404	0/0:30,0:28:81.19:0,81,1936	0/0:25,0:25:66.23:0,66,1591	0/0:22,0:22:60.21:0,60,1472	1/1:0,4:4:11.95:91,12,0	0/0:22,0:21:57.20:0,57,1381	0/0:26,1:25:66.23:0,66,1551	0/0:5,0:3:9.03:0,9,222
chr10	44612256	.	ATACTCT	A	703.35	PASS	AB=0.550;AC=10;AF=0.179;AN=56;BaseQRankSum=8.274;DP=578;FS=61.377;HRun=0;HaplotypeScore=201.9296;InbreedingCoeff=0.7209;MQ=75.73;MQ0=1;MQRankSum=-7.913;QD=25.12;ReadPosRankSum=2.059;VQSLOD=0.8279;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:34:87.16:0,87,2999	0/0:18,0:18:51.17:0,51,1802	0/0:31,0:31:90.30:0,90,2941	0/0:25,0:25:75.26:0,75,2568	0/0:20,0:20:51.18:0,51,1891	0/0:27,0:27:75.26:0,75,2624	0/0:22,0:22:66.23:0,66,2380	0/0:27,0:27:81.27:0,81,2876	0/0:32,0:32:90.31:0,90,3247	1/1:0,6:6:18.06:250,18,0	1/1:0,4:4:9.45:84,9,0	0/0:12,0:12:27.09:0,27,1013	0/0:25,0:25:66.23:0,66,2294	0/0:25,0:25:75.26:0,75,2728	1/1:0,5:5:15.05:197,15,0	0/1:2,4:6:99:140,0,208	0/0:20,0:20:36.12:0,36,1310	0/1:0,3:2:14.16:35,0,14	0/0:21,0:20:55.07:0,55,1979	0/0:31,0:30:71.96:0,72,2634	0/0:44,0:40:98.96:0,99,3624	0/0:31,0:29:81.28:0,81,3032	0/0:26,0:26:69.24:0,69,2544	0/0:23,0:23:63.22:0,63,2354	1/1:0,4:4:12.04:159,12,0	0/0:22,0:21:57.20:0,57,2082	0/0:27,1:26:69.24:0,69,2434	0/0:5,0:3:9.03:0,9,339
chr10	44612265	.	C	CA	1114.74	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=10.512;DP=610;FS=23.072;HRun=1;HaplotypeScore=157.1374;InbreedingCoeff=0.7979;MQ=75.88;MQ0=0;MQRankSum=-9.639;QD=25.92;ReadPosRankSum=-0.507;VQSLOD=1.6525;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,3:33:1.05:0,1,887	0/0:18,0:18:44.24:0,44,562	0/0:34,0:34:90.18:0,90,1122	0/0:30,0:30:78.22:0,78,963	0/0:22,0:22:57.12:0,57,692	0/0:27,0:27:78.19:0,78,990	0/0:22,0:22:66.21:0,66,856	0/0:35,0:35:90.27:0,90,1142	0/0:30,0:30:90.22:0,90,1126	1/1:6,3:9:27.09:358,27,0	1/1:5,3:8:15.04:189,15,0	0/0:11,0:11:24.08:0,24,311	0/0:24,0:24:69.22:0,69,891	0/0:26,0:26:72.17:0,72,912	1/1:7,3:10:23.99:301,24,0	0/1:7,0:7:56.75:160,0,57	0/0:18,0:18:39.13:0,39,506	1/1:3,0:2:6.02:81,6,0	0/0:21,0:21:54.14:0,54,672	0/0:27,1:27:69.22:0,69,895	0/0:38,7:41:50.48:0,50,1248	0/0:33,1:32:84.17:0,84,1036	0/0:24,0:24:69.22:0,69,894	0/0:26,0:26:69.14:0,69,845	1/1:4,2:6:15.05:196,15,0	0/0:25,0:24:63.19:0,63,800	0/0:28,1:27:75.16:0,75,936	0/0:3,2:3:9.03:0,9,117
chr10	44612266	.	AGGCT	A	1000.17	PASS	AB=0.636;AC=11;AF=0.196;AN=56;BaseQRankSum=10.218;DP=605;FS=26.208;HRun=0;HaplotypeScore=187.6556;InbreedingCoeff=0.8341;MQ=75.44;MQ0=0;MQRankSum=-9.595;QD=22.73;ReadPosRankSum=-0.174;VQSLOD=1.5539;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:81.75:0,82,2210	0/0:18,0:18:46.93:0,47,1216	0/0:33,0:33:96.33:0,96,2710	0/0:30,0:30:87.27:0,87,2334	0/0:22,0:22:57.15:0,57,1562	0/0:27,0:27:78.27:0,78,2229	0/0:23,0:23:69.24:0,69,1946	0/0:34,0:34:99:0,99,2770	0/0:29,0:29:87.30:0,87,2469	1/1:4,6:10:25.75:329,26,0	1/1:4,4:8:17.70:142,18,0	0/0:11,0:11:24.08:0,24,694	0/0:24,0:24:69.24:0,69,1992	0/0:27,0:27:75.26:0,75,2105	1/1:5,5:10:23.34:290,23,0	0/1:3,4:7:99:166,0,153	0/0:19,0:19:42.14:0,42,1154	1/1:0,3:2:3.90:44,4,0	0/0:22,0:22:60.21:0,60,1688	0/0:28,0:27:68.96:0,69,1998	0/0:43,0:39:69.85:0,70,2915	0/0:33,0:31:90.26:0,90,2443	0/0:23,0:23:69.24:0,69,1977	0/0:26,0:26:75.26:0,75,2045	1/1:2,4:6:17.90:200,18,0	0/0:23,0:22:63.22:0,63,1822	0/0:28,1:27:78.27:0,78,2173	0/0:5,0:3:9.03:0,9,259
chr10	44612285	.	C	CT	2978.36	PASS	AB=0.758;AC=13;AF=0.232;AN=56;BaseQRankSum=8.558;DP=667;FS=17.865;HRun=1;HaplotypeScore=153.9816;InbreedingCoeff=0.6342;MQ=66.25;MQ0=4;MQRankSum=-8.739;QD=21.43;ReadPosRankSum=-2.122;VQSLOD=1.8287;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:30,4:34:8.46:8,0,830	0/1:12,4:16:99:138,0,333	0/0:34,0:31:77.80:0,78,938	0/0:27,0:25:67.45:0,67,831	0/0:32,0:31:63.06:0,63,775	0/0:23,0:23:63.13:0,63,783	0/0:22,0:22:57.18:0,57,739	0/0:43,0:43:99:0,120,1531	0/0:26,1:27:21.26:0,21,772	1/1:1,19:18:51.15:710,51,0	1/1:2,14:16:42.14:627,42,0	0/0:11,0:11:21.07:0,21,272	0/0:28,0:28:78.24:0,78,993	0/0:29,0:29:75.18:0,75,951	1/1:1,14:15:36.04:484,36,0	0/1:3,8:11:44.79:299,0,45	0/0:16,2:18:3.27:0,3,513	1/1:1,6:6:9.03:135,9,0	0/0:20,0:19:54.18:0,54,701	0/0:28,1:28:60.19:0,60,764	0/0:33,8:37:9.64:0,10,1103	0/0:33,1:33:78.20:0,78,991	0/0:25,0:25:72.22:0,72,920	0/0:24,0:24:63.20:0,63,817	1/1:0,20:20:51.17:757,51,0	0/0:26,0:26:72.20:0,72,903	0/0:31,1:30:81.11:0,81,988	0/0:1,2:1:3.01:0,3,39
chr10	44612539	.	CT	C	581.42	PASS	AB=0.726;AC=2;AF=0.036;AN=56;BaseQRankSum=7.711;DP=703;FS=1.803;HRun=2;HaplotypeScore=89.9294;InbreedingCoeff=-0.0392;MQ=83.51;MQ0=0;MQRankSum=-2.753;QD=10.77;ReadPosRankSum=1.246;VQSLOD=1.9090;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:78.26:0,78,1168	0/1:14,5:18:99:147,0,446	0/0:27,0:27:78.20:0,78,1059	0/0:24,0:23:66.22:0,66,950	0/0:26,0:26:72.23:0,72,1057	0/0:31,0:31:93.32:0,93,1393	0/0:27,0:27:81.27:0,81,1214	0/0:34,0:34:99:0,102,1529	0/0:22,0:22:66.22:0,66,988	0/0:30,0:30:90.27:0,90,1325	0/0:25,0:25:75.25:0,75,1122	0/0:17,0:17:48.16:0,48,720	0/0:28,0:28:78.26:0,78,1164	0/0:19,0:19:57.19:0,57,853	0/0:32,0:32:90.30:0,90,1348	0/0:18,0:18:54.18:0,54,809	0/1:17,18:35:99:524,0,665	0/0:15,0:15:45.15:0,45,673	0/0:27,0:27:75.24:0,75,1103	0/0:28,0:28:84.28:0,84,1259	0/0:23,0:23:69.22:0,69,1008	0/0:28,0:28:84.27:0,84,1240	0/0:35,0:35:99:0,102,1526	0/0:23,0:23:66.21:0,66,952	0/0:28,0:28:84.23:0,84,1214	0/0:20,0:20:57.19:0,57,854	0/0:31,0:31:93.31:0,93,1392	0/0:3,0:3:9.03:0,9,135
chr10	44612588	.	A	AT	11234.37	PASS	AB=0.657;AC=30;AF=0.536;AN=56;BaseQRankSum=-15.489;DP=670;FS=1.700;HRun=8;HaplotypeScore=68.0518;InbreedingCoeff=0.8411;MQ=71.42;MQ0=0;MQRankSum=-1.495;QD=28.02;ReadPosRankSum=3.138;VQSLOD=5.2805;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,31:31:90.27:1039,90,0	0/1:7,14:20:58.68:399,0,59	0/0:16,0:16:41.99:0,42,370	0/0:10,0:10:20.96:0,21,179	1/1:3,28:32:90.21:1017,90,0	0/0:37,0:36:99:0,99,901	0/0:18,0:18:48.01:0,48,434	0/0:31,0:31:78.03:0,78,714	0/0:26,0:26:69.03:0,69,632	1/1:3,23:26:72.21:829,72,0	1/1:1,22:23:60.15:679,60,0	1/1:1,12:13:36.11:415,36,0	1/1:2,25:27:69.21:796,69,0	1/1:2,23:25:69.21:796,69,0	1/1:3,30:33:75.22:866,75,0	1/1:1,25:26:72.21:831,72,0	0/1:21,14:35:99:395,0,349	1/1:3,12:15:39.12:450,39,0	0/0:23,0:23:60.02:0,60,546	0/0:32,0:32:90.02:0,90,814	0/0:14,0:14:36.01:0,36,329	1/1:3,21:24:66.15:745,66,0	1/1:2,30:32:78.23:899,78,0	1/1:1,11:12:30.09:346,30,0	1/1:1,24:25:66.11:732,66,0	0/0:30,1:31:52.42:0,52,731	0/0:27,0:26:72.03:0,72,659	0/0:4,0:4:6:0,6,55
chr10	44613083	.	GA	G	344.14	PASS	AB=0.744;AC=2;AF=0.036;AN=56;BaseQRankSum=2.998;DP=589;FS=0.000;HRun=4;HaplotypeScore=159.6540;InbreedingCoeff=-0.0395;MQ=55.21;MQ0=3;MQRankSum=-0.635;QD=6.04;ReadPosRankSum=0.704;VQSLOD=-0.1349;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:69.13:0,69,891	0/1:13,9:22:99:262,0,402	0/0:16,0:15:45.05:0,45,565	0/0:21,0:17:34.46:0,34,490	0/0:33,0:33:81.27:0,81,1123	0/0:27,0:27:78.23:0,78,1044	0/0:22,0:22:54.14:0,54,734	0/0:29,0:27:78.23:0,78,1055	0/0:12,0:12:36.11:0,36,485	0/0:20,0:20:54.18:0,54,756	0/0:24,0:24:48.15:0,48,641	0/0:22,0:22:63.16:0,63,843	0/0:27,0:27:78.25:0,78,1064	0/0:27,0:27:75.20:0,75,1020	0/0:24,0:24:66.22:0,66,922	0/0:16,0:16:48.16:0,48,668	0/1:25,10:34:99:171,0,735	0/0:5,0:5:9.03:0,9,126	0/0:22,0:21:57.15:0,57,760	0/0:26,0:25:66.21:0,66,906	0/0:10,0:10:21.07:0,21,294	0/0:12,0:11:27.06:0,27,347	0/0:25,0:24:60.12:0,60,785	0/0:15,0:15:39.11:0,39,528	0/0:25,0:25:69.20:0,69,944	0/0:17,0:17:48.16:0,48,670	0/0:20,0:20:51.17:0,51,707	0/0:8,0:8:24.08:0,24,336
chr10	44613132	.	C	CAGT	12358.48	PASS	AB=0.632;AC=36;AF=0.720;AN=50;BaseQRankSum=7.193;DP=415;FS=19.508;HRun=0;HaplotypeScore=87.8661;InbreedingCoeff=0.7756;MQ=39.75;MQ0=8;MQRankSum=-9.075;QD=44.78;ReadPosRankSum=3.633;VQSLOD=4.7551;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:2,9:11:29.89:312,0,30	0/0:12,0:12:36.12:0,36,576	./.	./.	1/1:5,17:20:42.14:922,42,0	0/0:20,0:19:39.13:0,39,627	0/0:17,0:17:30.10:0,30,477	0/0:26,0:21:51.17:0,51,812	0/0:19,0:19:48.16:0,48,757	1/1:3,6:11:21.06:423,21,0	1/1:3,8:10:21.07:462,21,0	1/1:5,7:13:21.07:462,21,0	1/1:4,17:22:54.19:1171,54,0	1/1:5,13:18:36.12:792,36,0	1/1:0,12:13:33.11:726,33,0	1/1:3,13:16:39.13:859,39,0	0/0:32,0:32:57.17:0,57,886	1/1:1,2:3:6.02:132,6,0	1/1:8,5:9:12.04:264,12,0	1/1:3,13:12:33.11:723,33,0	./.	1/1:1,13:13:36.12:790,36,0	1/1:2,11:11:24.08:527,24,0	0/1:3,2:5:84.31:120,0,84	1/1:2,14:16:39.13:858,39,0	1/1:4,13:17:45.15:965,45,0	1/1:3,23:25:57.20:1255,57,0	1/1:0,13:13:27.09:595,27,0
chr10	44613520	.	TG	T	10119.01	PASS	AB=0.548;AC=45;AF=0.804;AN=56;BaseQRankSum=8.197;DP=607;FS=2.859;HRun=8;HaplotypeScore=77.0557;InbreedingCoeff=0.8504;MQ=51.62;MQ0=6;MQRankSum=1.390;QD=20.28;ReadPosRankSum=6.855;VQSLOD=4.5445;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,23:26:48.07:464,48,0	1/1:0,15:13:36.05:348,36,0	0/0:25,1:21:54.15:0,54,618	0/0:26,0:19:21.52:0,22,234	1/1:4,25:29:45.95:485,46,0	0/0:20,0:20:42.13:0,42,507	0/0:17,0:17:45.02:0,45,516	1/1:7,15:16:27.04:261,27,0	0/0:19,0:19:51.15:0,51,614	1/1:1,32:31:90.14:865,90,0	1/1:2,26:28:66.11:637,66,0	1/1:4,16:21:36.05:348,36,0	1/1:1,18:19:42.07:406,42,0	1/1:1,12:13:27.04:261,27,0	1/1:1,26:26:69.11:666,69,0	0/1:3,14:17:6.19:231,0,6	1/1:4,28:29:57.09:550,57,0	1/1:2,21:22:51.08:493,51,0	1/1:3,5:3:6:58,6,0	1/1:2,24:25:42.06:406,42,0	1/1:0,26:26:63.10:608,63,0	1/1:0,23:22:51.08:492,51,0	1/1:1,15:16:33.05:319,33,0	1/1:1,14:15:30.05:290,30,0	1/1:1,19:20:54.09:521,54,0	1/1:0,27:27:81.11:775,81,0	1/1:3,29:30:63.10:608,63,0	1/1:0,1:1:3:29,3,0
chr10	44614151	.	C	CA	7936.21	PASS	AB=0.548;AC=39;AF=0.696;AN=56;BaseQRankSum=12.538;DP=504;FS=46.919;HRun=5;HaplotypeScore=72.7874;InbreedingCoeff=0.9099;MQ=50.10;MQ0=7;MQRankSum=-10.370;QD=23.34;ReadPosRankSum=0.186;VQSLOD=1.6559;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,13:11:24.07:300,24,0	0/0:8,0:8:24.06:0,24,256	0/0:18,0:11:18.05:0,18,261	0/0:19,0:17:39.07:0,39,416	1/1:1,21:20:44.95:564,45,0	0/0:29,0:29:72.18:0,72,771	0/0:15,0:15:36.09:0,36,386	0/0:22,0:18:48.12:0,48,516	0/0:23,0:23:57.07:0,57,612	1/1:1,20:18:51.17:668,51,0	1/1:1,23:24:63.19:789,63,0	1/1:0,14:11:18.06:231,18,0	1/1:2,22:15:33.11:428,33,0	1/1:4,18:19:39.01:468,39,0	1/1:4,22:16:30.09:382,30,0	0/1:3,14:15:5.11:288,0,5	0/0:30,0:30:84.19:0,84,893	1/1:2,5:7:15.05:197,15,0	1/1:1,6:4:12.04:157,12,0	1/1:2,13:15:30.09:382,30,0	1/1:0,6:5:15.05:192,15,0	1/1:1,16:14:33.11:430,33,0	1/1:3,18:17:36.12:464,36,0	1/1:3,11:12:15.05:191,15,0	1/1:1,19:19:42.13:544,42,0	1/1:3,18:20:48.10:597,48,0	1/1:3,20:22:42.14:546,42,0	1/1:0,3:3:9.03:118,9,0
chr10	44615107	.	GA	G	5563.39	PASS	AB=0.771;AC=40;AF=0.714;AN=56;BaseQRankSum=12.967;DP=415;FS=1.413;HRun=3;HaplotypeScore=90.5288;InbreedingCoeff=0.8084;MQ=64.56;MQ0=9;MQRankSum=-5.750;QD=22.34;ReadPosRankSum=5.572;VQSLOD=4.1351;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,17:16:36.10:408,36,0	0/1:8,0:8:14.26:14,0,191	0/0:30,0:23:51.19:0,51,631	0/0:27,1:21:53.52:0,54,725	1/1:0,17:15:20.54:245,21,0	0/0:8,0:8:24.08:0,24,344	0/0:21,0:21:57.15:0,57,751	0/0:20,0:20:57.17:0,57,771	0/0:31,0:29:84.27:0,84,1190	1/1:0,11:10:30.08:335,30,0	1/1:1,12:11:14.01:166,14,0	1/1:0,4:4:12.03:136,12,0	1/1:0,11:11:30.08:336,30,0	1/1:0,9:9:21.06:243,21,0	1/1:5,20:22:53.36:621,53,0	0/1:2,11:12:7.58:249,0,8	0/0:27,0:26:72.21:0,72,1014	1/1:2,7:8:23.09:240,23,0	1/1:1,5:5:12.01:124,12,0	1/1:0,14:14:33.10:379,33,0	1/1:3,9:11:22.83:245,23,0	1/1:0,7:7:12.03:138,12,0	1/1:0,11:10:23.99:259,24,0	1/1:1,8:8:15:157,15,0	1/1:2,16:15:29.01:325,29,0	1/1:3,11:13:30.04:321,30,0	1/1:0,17:17:44.97:520,45,0	1/1:0,4:4:9.03:104,9,0
chr10	44615399	.	TGACA	T	365.27	PASS	AB=0.696;AC=2;AF=0.036;AN=56;BaseQRankSum=4.445;DP=568;FS=21.495;HRun=0;HaplotypeScore=100.5040;InbreedingCoeff=-0.0501;MQ=62.19;MQ0=25;MQRankSum=-2.497;QD=13.53;ReadPosRankSum=0.245;VQSLOD=1.6722;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:36:69.24:0,69,1889	0/1:6,3:9:37.04:37,0,472	0/0:26,0:9:17.70:0,18,301	0/0:35,0:15:25.55:0,26,544	0/0:12,0:9:12.04:0,12,328	0/0:33,0:33:96.33:0,96,2607	0/0:13,0:13:39.13:0,39,1069	0/0:40,0:40:99:0,117,3031	0/0:19,0:19:57.20:0,57,1518	0/0:20,0:15:45.15:0,45,1208	0/0:13,0:11:21.07:0,21,573	0/0:17,0:15:30.10:0,30,822	0/0:15,0:12:24.08:0,24,654	0/0:26,0:24:51.18:0,51,1370	0/0:20,0:18:30.10:0,30,821	0/0:17,0:14:27.09:0,27,730	0/1:8,10:18:99:417,0,601	0/0:10,0:8:18.06:0,18,492	0/0:16,0:14:42.14:0,42,1035	0/0:15,0:11:18.06:0,18,460	0/0:37,0:31:42.08:0,42,1140	0/0:7,0:4:3.01:0,3,82	0/0:8,0:5:6.02:0,6,164	0/0:26,0:23:23.36:0,23,655	0/0:13,0:11:33.11:0,33,904	0/0:19,0:17:48.16:0,48,1262	0/0:34,0:22:45.15:0,45,1229	0/0:10,0:10:21.07:0,21,575
chr10	44615485	.	GC	G	418.57	PASS	AB=0.836;AC=3;AF=0.054;AN=56;BaseQRankSum=3.943;DP=632;FS=4.804;HRun=3;HaplotypeScore=73.1247;InbreedingCoeff=-0.0571;MQ=53.27;MQ0=29;MQRankSum=-2.319;QD=5.98;ReadPosRankSum=-0.411;VQSLOD=0.2989;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:25:57.19:0,57,820	0/1:14,3:17:26.16:26,0,557	0/1:24,0:6:18.68:19,0,96	0/0:16,0:6:15.05:0,15,216	0/0:32,0:32:81.22:0,81,1124	0/0:20,0:20:60.20:0,60,863	0/0:8,0:8:21.07:0,21,302	0/0:32,0:28:78.25:0,78,1106	0/0:21,0:21:63.20:0,63,888	0/0:38,0:38:99:0,111,1567	0/0:30,0:27:60.20:0,60,862	0/0:18,0:18:51.17:0,51,734	0/0:27,0:26:72.24:0,72,1035	0/0:20,0:19:57.19:0,57,818	0/0:17,0:16:42.14:0,42,604	0/0:22,0:22:66.18:0,66,925	0/1:14,15:29:99:473,0,477	0/0:13,0:13:36.12:0,36,518	0/0:13,0:11:27.56:0,28,386	0/0:25,0:25:66.12:0,66,948	0/0:17,0:16:48.16:0,48,691	0/0:25,0:25:66.22:0,66,949	0/0:26,0:25:69.23:0,69,993	0/0:17,0:17:39.13:0,39,560	0/0:23,0:21:60.20:0,60,864	0/0:32,0:30:90.30:0,90,1296	0/0:34,0:31:75.25:0,75,1072	0/0:10,0:10:30.10:0,30,428
chr10	44615653	.	G	GT	633.32	PASS	AB=0.702;AC=4;AF=0.222;AN=18;BaseQRankSum=6.468;DP=165;FS=14.885;HRun=2;HaplotypeScore=46.4662;MQ=65.54;MQ0=3;MQRankSum=-0.769;QD=11.11;ReadPosRankSum=1.192;VQSLOD=0.2167;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,2:2:6.02:86,6,0	0/1:12,10:22:99:302,0,369	0/0:11,0:11:27.08:0,27,334	0/0:7,0:7:21.07:0,21,260	./.	0/0:12,0:12:33.10:0,33,409	0/0:9,0:9:27.07:0,27,321	0/0:38,0:38:99:0,105,1266	0/0:26,0:26:72.23:0,72,892	./.	./.	./.	./.	./.	./.	./.	0/1:20,12:32:99:334,0,634	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.
chr10	44615838	.	AT	A	58	PASS	AC=6;AF=0.273;AN=22;BaseQRankSum=3.100;DP=168;FS=3.591;HRun=2;HaplotypeScore=49.6987;InbreedingCoeff=0.7776;MQ=67.34;MQ0=2;MQRankSum=-2.337;QD=11.60;ReadPosRankSum=-1.627;VQSLOD=1.4504;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	0/0:9,0:9:27.09:0,27,404	0/0:22,0:11:32.94:0,33,464	0/0:18,0:14:21.65:0,22,347	./.	0/0:14,0:14:42.14:0,42,627	0/0:13,0:13:36.10:0,36,518	0/0:20,0:20:60.19:0,60,863	0/0:14,0:14:42.13:0,42,603	./.	./.	./.	./.	./.	./.	./.	0/0:51,0:48:99:0,120,1614	1/1:0,2:1:3.01:39,3,0	1/1:0,2:2:6.02:78,6,0	./.	./.	./.	./.	./.	./.	1/1:0,1:1:3.01:39,3,0	./.	./.
chr10	44616031	.	GA	G	669.69	PASS	AB=0.686;AC=2;AF=0.111;AN=18;BaseQRankSum=4.351;DP=144;FS=3.161;HRun=2;HaplotypeScore=54.8862;MQ=90.68;MQ0=1;MQRankSum=-1.367;QD=12.40;ReadPosRankSum=2.918;VQSLOD=2.5265;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	0/1:7,5:12:99:162,0,237	0/0:15,0:13:39.11:0,39,537	0/0:10,0:10:29.98:0,30,383	./.	0/0:14,0:14:42.13:0,42,609	0/0:7,0:7:21.07:0,21,315	0/0:29,0:29:87.27:0,87,1252	0/0:12,0:12:33.11:0,33,495	./.	./.	./.	./.	./.	./.	./.	0/1:21,21:42:99:587,0,751	./.	0/0:2,0:2:6.02:0,6,73	./.	./.	./.	./.	./.	./.	./.	./.	./.
chr10	44616124	.	GTAA	G	742.55	PASS	AC=6;AF=0.60;AN=10;BaseQRankSum=-0.269;DP=104;FS=0.000;HRun=0;HaplotypeScore=49.0884;MQ=64.54;MQ0=1;MQRankSum=2.252;QD=12.80;ReadPosRankSum=-0.184;VQSLOD=2.9715;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	0/0:4,0:6:11.95:0,12,119	./.	./.	./.	1/1:5,11:16:30.10:402,30,0	./.	1/1:25,7:30:21.06:265,21,0	1/1:6,4:10:12.04:161,12,0	./.	./.	./.	./.	./.	./.	./.	0/0:28,1:32:1.90:0,2,559	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.
chr10	44616542	.	G	GCAT	900.47	PASS	AB=0.751;AC=2;AF=0.036;AN=56;BaseQRankSum=6.625;DP=571;FS=4.599;HRun=0;HaplotypeScore=123.6255;InbreedingCoeff=-0.0372;MQ=75.47;MQ0=0;MQRankSum=-5.555;QD=21.44;ReadPosRankSum=0.654;VQSLOD=3.5040;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:60.15:0,60,970	0/1:12,4:16:99:369,0,325	0/0:23,0:23:63.22:0,63,1106	0/0:16,0:16:32.97:0,33,610	0/0:33,0:33:99:0,99,1554	0/0:21,0:21:63.22:0,63,1111	0/0:16,0:16:42.11:0,42,653	0/0:22,0:22:60.17:0,60,953	0/0:14,0:14:42.14:0,42,730	0/0:32,0:32:96.28:0,96,1609	0/0:31,0:31:93.28:0,93,1600	0/0:21,0:21:60.19:0,60,1023	0/0:20,0:20:54.17:0,54,915	0/0:17,0:17:51.17:0,51,885	0/0:18,0:18:54.17:0,54,924	0/0:9,0:9:24.08:0,24,420	0/1:15,11:26:99:620,0,615	0/0:14,0:14:42.14:0,42,709	0/0:25,0:25:75.25:0,75,1262	0/0:26,0:26:75.17:0,75,1254	0/0:19,0:19:54.18:0,54,945	0/0:25,0:25:56.22:0,56,1141	0/0:23,0:23:69.06:0,69,1132	0/0:10,0:10:27.08:0,27,448	0/0:20,0:20:54.01:0,54,819	0/0:23,0:23:69.24:0,69,1217	0/0:23,0:23:69.24:0,69,1214	0/0:8,0:8:24.04:0,24,363
chr10	44616598	.	G	GTT	379.52	PASS	AB=0.726;AC=2;AF=0.036;AN=56;BaseQRankSum=6.172;DP=513;FS=7.517;HRun=6;HaplotypeScore=78.5015;InbreedingCoeff=-0.0462;MQ=68.60;MQ0=3;MQRankSum=-3.805;QD=10.26;ReadPosRankSum=-2.249;VQSLOD=-0.5312;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:72.23:0,72,878	0/1:10,8:18:99:367,0,242	0/0:11,0:11:0.91:0,1,168	0/0:11,0:10:19.87:0,20,219	0/0:37,0:37:99:0,102,1232	0/0:22,0:21:60.19:0,60,732	0/0:9,0:9:21.06:0,21,256	0/0:35,0:35:87.24:0,87,1040	0/0:12,0:12:36.08:0,36,423	0/0:23,0:23:66.19:0,66,795	0/0:32,0:32:87.22:0,87,1020	0/0:12,0:12:33.08:0,33,390	0/0:17,0:17:45.11:0,45,525	0/0:11,0:11:33.10:0,33,402	0/0:11,0:11:27.08:0,27,329	0/0:11,0:11:27.07:0,27,317	0/1:13,6:19:99:102,0,344	0/0:12,0:12:33.08:0,33,388	0/0:22,0:20:48.13:0,48,572	0/0:22,0:22:63.19:0,63,765	0/0:12,0:12:27.08:0,27,329	0/0:19,0:19:45.13:0,45,536	0/0:18,0:18:54.17:0,54,656	0/0:15,0:15:45.12:0,45,534	0/0:25,0:25:60.16:0,60,719	0/0:22,0:22:63.17:0,63,745	0/0:19,0:19:51.15:0,51,622	0/0:11,0:11:30.09:0,30,366
chr10	44616783	.	AT	A	522.96	PASS	AB=0.678;AC=2;AF=0.036;AN=56;BaseQRankSum=1.972;DP=541;FS=0.756;HRun=6;HaplotypeScore=123.6716;InbreedingCoeff=-0.0441;MQ=66.76;MQ0=0;MQRankSum=-0.317;QD=8.72;ReadPosRankSum=0.384;VQSLOD=0.5617;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:54.15:0,54,680	0/1:9,9:18:99:207,0,304	0/0:14,1:14:36.06:0,36,425	0/0:6,0:6:3.08:0,3,127	0/0:38,0:38:99:0,114,1459	0/0:17,0:17:51.17:0,51,671	0/0:15,0:15:45.15:0,45,592	0/0:38,0:38:99:0,102,1329	0/0:15,0:15:45.15:0,45,592	0/0:24,0:24:72.22:0,72,931	0/0:26,0:26:72.23:0,72,945	0/0:11,0:11:33.11:0,33,434	0/0:20,0:20:60.18:0,60,774	0/0:14,0:14:39.13:0,39,512	0/0:19,0:19:57.19:0,57,749	0/0:18,0:18:51.14:0,51,641	0/1:23,19:42:99:405,0,515	0/0:13,0:13:33.11:0,33,434	0/0:20,0:20:54.17:0,54,695	0/0:23,0:23:69.20:0,69,878	0/0:9,0:9:24.06:0,24,300	0/0:14,0:14:39.07:0,39,479	0/0:25,0:25:75.24:0,75,986	0/0:11,0:11:33.06:0,33,387	0/0:14,0:14:42.09:0,42,533	0/0:25,0:25:72.22:0,72,912	0/0:24,0:24:72.23:0,72,947	0/0:8,0:8:15.05:0,15,197
chr10	44616959	.	TTA	T	4543.24	PASS	AB=0.515;AC=11;AF=0.196;AN=56;BaseQRankSum=-4.030;DP=601;FS=36.881;HRun=0;HaplotypeScore=160.0943;InbreedingCoeff=0.8920;MQ=76.44;MQ0=0;MQRankSum=-3.113;QD=39.51;ReadPosRankSum=1.107;VQSLOD=2.5579;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:62.30:0,62,417	0/0:16,0:16:44.83:0,45,670	0/0:18,0:18:54.18:0,54,1026	0/0:19,0:19:51.17:0,51,961	0/0:23,0:23:54.62:0,55,359	0/0:29,0:29:87.28:0,87,1634	0/0:22,0:22:63.22:0,63,1208	0/0:35,0:35:99:0,105,1986	0/0:21,0:21:60.21:0,60,1152	1/1:0,24:24:69.22:1031,69,0	1/1:1,24:25:69.15:994,69,0	0/0:21,0:21:62.30:0,62,419	0/0:23,0:23:50.90:0,51,339	0/0:23,0:23:59.32:0,59,399	1/1:0,24:24:69.23:1047,69,0	0/1:1,16:17:12.81:598,0,13	0/0:38,0:37:73.92:0,74,1290	1/1:1,13:14:30.10:459,30,0	0/0:17,0:17:24.53:0,25,294	0/0:16,0:16:43.68:0,44,277	0/0:22,0:22:59.17:0,59,393	0/0:25,0:25:63.22:0,63,418	0/0:14,0:14:32.63:0,33,218	0/0:18,0:18:50.44:0,50,340	1/1:0,11:11:27.09:413,27,0	0/0:34,0:34:89.32:0,89,587	0/0:18,0:18:50.42:0,50,337	0/0:12,0:12:35.58:0,36,238
chr10	44616960	.	T	TG	13538.29	PASS	AB=0.806;AC=31;AF=0.554;AN=56;BaseQRankSum=4.414;DP=589;FS=0.304;HRun=0;HaplotypeScore=112.2500;InbreedingCoeff=0.7610;MQ=77.02;MQ0=0;MQRankSum=-3.219;QD=37.82;ReadPosRankSum=2.654;VQSLOD=4.6073;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,21:21:63.21:1006,63,0	0/1:11,5:16:99:194,0,373	0/0:18,0:18:54.18:0,54,754	0/0:17,0:17:45.16:0,45,666	1/1:1,21:22:60.12:927,60,0	0/0:30,0:30:87.26:0,87,1181	0/0:21,0:21:63.21:0,63,880	0/0:36,0:36:99:0,105,1424	0/0:20,0:20:60.20:0,60,837	0/0:24,0:24:15.87:0,16,62	0/1:24,0:24:1.91:2,0,45	1/1:0,22:22:63.21:1007,63,0	1/1:0,20:20:54.18:863,54,0	1/1:1,22:23:60.20:959,60,0	0/0:24,0:24:0.39:0,0,50	0/0:17,0:17:24.78:0,25,97	0/1:18,20:37:99:752,0,627	0/0:13,0:13:15.55:0,16,39	1/1:1,17:18:51.16:793,51,0	1/1:0,16:16:48.16:755,48,0	1/1:0,21:21:60.20:959,60,0	1/1:1,24:25:69.15:1059,69,0	1/1:0,13:13:33.11:526,33,0	1/1:0,18:18:51.17:815,51,0	0/0:11,0:11:7.31:0,7,24	1/1:0,32:32:96.33:1532,96,0	1/1:0,17:17:51.17:815,51,0	1/1:0,12:12:36.12:575,36,0
chr10	44617031	.	TCAC	T	187.13	PASS	AB=0.766;AC=2;AF=0.036;AN=56;BaseQRankSum=5.850;DP=631;FS=5.534;HRun=0;HaplotypeScore=163.2655;InbreedingCoeff=-0.0376;MQ=64.80;MQ0=0;MQRankSum=-3.530;QD=4.35;ReadPosRankSum=0.681;VQSLOD=2.3948;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,99,2336	0/1:12,6:17:94.39:94,0,833	0/0:22,0:22:66.14:0,66,1496	0/0:23,0:23:55.43:0,55,1307	0/0:24,0:24:69.24:0,69,1668	0/0:28,0:28:84.29:0,84,2036	0/0:29,0:29:87.30:0,87,2111	0/0:33,0:33:99:0,99,2329	0/0:24,0:24:72.25:0,72,1710	0/0:19,0:19:57.20:0,57,1379	0/0:19,0:19:57.20:0,57,1396	0/0:26,0:26:75.26:0,75,1822	0/0:21,0:21:60.21:0,60,1460	0/0:19,0:19:57.20:0,57,1398	0/0:28,0:28:78.27:0,78,1895	0/0:21,0:21:60.21:0,60,1479	0/1:18,7:25:99:182,0,1179	0/0:17,0:17:42.14:0,42,1035	0/0:21,0:21:60.18:0,60,1335	0/0:19,0:19:57.20:0,57,1375	0/0:38,0:38:99:0,114,2749	0/0:21,0:21:60.21:0,60,1476	0/0:14,0:14:36.12:0,36,884	0/0:18,0:18:48.16:0,48,1181	0/0:8,0:8:18.06:0,18,427	0/0:30,0:30:66.37:0,66,1984	0/0:26,0:26:78.27:0,78,1886	0/0:6,0:6:18.05:0,18,394
chr10	44617035	.	A	AT	68.27	PASS	AB=0.762;AC=2;AF=0.036;AN=56;BaseQRankSum=5.810;DP=637;FS=1.063;HRun=0;HaplotypeScore=138.3637;InbreedingCoeff=-0.0379;MQ=63.98;MQ0=0;MQRankSum=-3.690;QD=1.63;ReadPosRankSum=1.310;VQSLOD=2.5291;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:90.30:0,90,1252	0/1:12,6:17:53.39:53,0,452	0/0:24,0:24:62.26:0,62,937	0/0:22,0:22:57.19:0,57,784	0/0:27,0:27:72.22:0,72,965	0/0:28,0:28:84.28:0,84,1173	0/0:30,0:30:84.28:0,84,1173	0/0:33,0:33:96.31:0,96,1326	0/0:23,0:23:69.23:0,69,965	0/0:22,0:22:54.18:0,54,755	0/0:20,0:20:60.17:0,60,804	0/0:26,0:26:72.24:0,72,1005	0/0:24,0:24:66.16:0,66,882	0/0:19,0:19:57.16:0,57,775	0/0:28,0:28:78.26:0,78,1089	0/0:21,0:21:60.20:0,60,839	0/1:17,7:24:99:104,0,639	0/0:18,0:18:42.14:0,42,581	0/0:20,0:20:51.16:0,51,698	0/0:18,0:18:54.18:0,54,755	0/0:38,0:38:99:0,114,1551	0/0:21,0:21:60.20:0,60,830	0/0:16,0:16:42.11:0,42,551	0/0:19,0:19:51.17:0,51,712	0/0:9,0:9:18.06:0,18,251	0/0:27,0:27:81.27:0,81,1132	0/0:26,0:26:75.24:0,75,1031	0/0:6,0:6:15.05:0,15,210
chr10	44617245	.	G	GA	6898.82	PASS	AB=0.600;AC=39;AF=0.696;AN=56;BaseQRankSum=9.915;DP=370;FS=38.161;HRun=0;HaplotypeScore=81.8815;InbreedingCoeff=0.8887;MQ=58.26;MQ0=1;MQRankSum=-6.518;QD=36.31;ReadPosRankSum=2.449;VQSLOD=2.5330;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,12:16:45.04:600,45,0	0/0:17,0:17:41.87:0,42,556	0/0:22,0:17:43.43:0,43,550	0/0:20,0:17:44.99:0,45,536	1/1:2,12:14:30.02:419,30,0	0/0:13,0:13:39.11:0,39,513	0/0:23,0:23:69.17:0,69,879	0/0:32,0:32:90.08:0,90,1071	0/0:23,0:23:69.21:0,69,932	1/1:1,5:6:15.05:224,15,0	1/1:0,5:5:15.05:223,15,0	1/1:2,14:16:48.08:667,48,0	1/1:0,8:8:21.07:312,21,0	1/1:0,8:8:21.07:306,21,0	1/1:0,7:7:18.06:267,18,0	1/1:0,2:2:6.02:90,6,0	0/0:30,0:29:71.40:0,71,931	1/1:1,12:13:30.10:444,30,0	1/1:1,5:6:18.06:253,18,0	1/1:1,13:14:42.01:551,42,0	1/1:3,10:12:30.03:414,30,0	1/1:1,14:15:45.14:637,45,0	1/1:1,9:10:12.04:178,12,0	1/1:0,8:8:15.05:223,15,0	1/1:1,5:6:18.05:250,18,0	1/1:1,6:7:21.07:313,21,0	1/1:0,10:10:30.10:447,30,0	0/1:2,4:6:9.94:80,0,10
chr10	44617272	.	G	GGA	5641.30	PASS	AB=0.857;AC=41;AF=0.732;AN=56;BaseQRankSum=12.960;DP=308;FS=21.511;HRun=0;HaplotypeScore=76.0844;InbreedingCoeff=0.7167;MQ=71.11;MQ0=1;MQRankSum=-12.267;QD=36.87;ReadPosRankSum=-0.152;VQSLOD=4.4376;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,12:15:39.03:638,39,0	0/1:15,0:17:16.86:17,0,631	0/0:21,0:20:60.11:0,60,853	0/0:17,0:16:23.30:0,23,498	1/1:1,8:9:21.07:394,21,0	0/0:14,0:14:42.14:0,42,677	0/0:20,0:20:60.16:0,60,898	0/0:36,0:36:99:0,105,1690	0/0:20,0:20:60.20:0,60,977	1/1:0,0:5:9.03:106,9,0	1/1:2,0:3:5.95:42,6,0	1/1:1,12:13:30.06:559,30,0	1/1:0,5:5:15.05:278,15,0	1/1:2,6:9:27.06:475,27,0	1/1:2,0:5:14.07:144,14,0	1/1:1,0:1:3:26,3,0	0/0:24,0:26:2.22:0,2,957	1/1:1,0:4:8.99:91,9,0	1/1:0,3:3:9.01:144,9,0	1/1:0,9:9:27.09:470,27,0	1/1:3,7:10:12.38:142,12,0	1/1:0,14:16:45.15:823,45,0	1/1:0,6:7:21.07:396,21,0	1/1:3,1:4:3.01:61,3,0	1/1:0,0:3:5.88:50,6,0	1/1:0,4:4:12.04:242,12,0	1/1:0,9:9:24.08:484,24,0	1/1:0,1:1:3.01:61,3,0
chr10	44617585	.	CT	C	14220.88	PASS	AB=0.691;AC=42;AF=0.750;AN=56;BaseQRankSum=17.316;DP=626;FS=9.172;HRun=2;HaplotypeScore=93.9477;InbreedingCoeff=0.7792;MQ=68.80;MQ0=3;MQRankSum=-0.866;QD=30.00;ReadPosRankSum=6.681;VQSLOD=3.4128;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,26:26:72.23:935,72,0	0/1:8,9:14:99:155,0,273	0/0:22,0:21:60.20:0,60,885	0/0:19,0:18:31.72:0,32,618	1/1:0,15:15:39.13:506,39,0	0/0:23,0:23:69.23:0,69,1016	0/0:28,0:28:84.28:0,84,1259	0/0:35,0:35:99:0,102,1529	0/0:25,0:25:75.25:0,75,1124	1/1:0,18:15:45.15:584,45,0	1/1:1,11:11:21.07:272,21,0	1/1:0,24:23:60.20:779,60,0	1/1:0,23:23:60.20:779,60,0	1/1:0,21:21:57.18:736,57,0	1/1:0,29:29:87.28:1130,87,0	1/1:0,31:31:90.10:1168,90,0	0/1:32,19:51:99:481,0,1253	1/1:0,23:23:66.21:857,66,0	1/1:1,8:9:21.07:270,21,0	1/1:0,15:14:39.13:506,39,0	1/1:0,43:41:99:1363,105,0	1/1:1,9:10:24.08:311,24,0	1/1:0,12:12:27.09:350,27,0	1/1:0,24:24:66.21:857,66,0	1/1:1,16:16:29.91:389,30,0	1/1:0,16:14:42.14:545,42,0	1/1:0,35:35:93.30:1207,93,0	1/1:0,3:3:3.01:39,3,0
chr10	44618833	.	AG	A	13981.65	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=18.397;DP=611;FS=2.780;HRun=1;HaplotypeScore=166.3934;InbreedingCoeff=0.9933;MQ=78.92;MQ0=3;MQRankSum=-6.596;QD=35.58;ReadPosRankSum=4.406;VQSLOD=4.4619;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,33:33:96.28:1318,96,0	0/0:15,0:15:45.13:0,45,671	0/0:27,0:26:78.20:0,78,1192	0/0:29,0:29:84.28:0,84,1317	1/1:0,26:24:69.12:917,69,0	0/0:24,0:23:63.20:0,63,979	0/0:26,0:26:78.27:0,78,1244	0/0:24,0:24:69.24:0,69,1094	0/0:22,0:22:63.21:0,63,1006	1/1:0,18:14:42.14:586,42,0	1/1:0,14:13:39.13:544,39,0	1/1:0,18:17:48.16:670,48,0	1/1:0,25:24:57.19:795,57,0	1/1:0,16:15:45.15:628,45,0	1/1:0,22:22:63.17:857,63,0	1/1:0,30:30:84.28:1173,84,0	0/0:51,0:48:99:0,129,2052	1/1:0,21:21:57.19:797,57,0	1/1:0,13:12:36.07:465,36,0	1/1:0,27:22:60.20:835,60,0	1/1:0,28:28:69.23:964,69,0	1/1:0,10:8:18.06:251,18,0	1/1:0,11:11:27.09:377,27,0	1/1:0,24:24:54.17:754,54,0	1/1:0,20:19:48.16:670,48,0	1/1:0,18:18:51.17:712,51,0	1/1:1,14:14:36.12:499,36,0	1/1:0,4:4:12.04:167,12,0
chr10	44618974	.	AACACACACAC	A	1559.39	PASS	AB=0.952;AC=15;AF=0.357;AN=42;BaseQRankSum=3.385;DP=428;FS=4.398;HRun=0;HaplotypeScore=155.6019;InbreedingCoeff=0.6492;MQ=64.28;MQ0=11;MQRankSum=-2.878;QD=9.87;ReadPosRankSum=0.377;VQSLOD=2.4191;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:19,0:18:0:0,0,0	./.	./.	./.	0/0:24,0:23:21.50:0,22,366	0/0:16,0:15:30.09:0,30,1115	0/0:12,0:12:11.99:0,12,316	0/1:37,0:35:5.01:5,0,27	0/0:19,0:19:36.06:0,36,1215	1/1:12,1:11:9.03:228,9,0	1/1:9,5:17:12.04:242,12,0	0/0:7,0:10:0.47:0,0,1	./.	./.	1/1:11,5:16:18.06:467,18,0	1/1:15,3:18:15.02:271,15,0	0/0:13,0:10:6.02:0,6,179	0/1:10,1:12:14.99:81,0,15	0/0:11,0:11:13.17:0,13,355	0/0:25,0:22:20.81:0,21,823	0/0:15,0:15:12.04:0,12,435	./.	./.	1/1:8,0:10:2.98:22,3,0	1/1:10,5:16:21.03:396,21,0	0/0:16,0:14:24.07:0,24,814	0/0:20,0:18:27.09:0,27,1193	0/0:6,0:6:9.03:0,9,346
chr10	44619006	.	CACACACACACACACAT	C	1512.85	PASS	AB=1.000;AC=13;AF=0.271;AN=48;BaseQRankSum=4.173;DP=401;FS=5.744;HRun=0;HaplotypeScore=185.1106;InbreedingCoeff=-0.0498;MQ=45.67;MQ0=20;MQRankSum=-1.325;QD=7.07;ReadPosRankSum=-4.203;VQSLOD=1.1175;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:22:2.98:0,3,45	0/0:4,0:3:7.97:0,8,46	./.	./.	0/0:27,0:25:24.08:0,24,680	0/0:22,0:21:60.16:0,60,2932	0/0:8,0:8:21.06:0,21,863	1/1:4,27:27:80.30:760,80,0	0/0:20,0:20:51.09:0,51,2602	0/1:13,0:11:75.18:103,0,75	1/1:20,0:19:0.88:62,1,0	0/0:8,0:7:6.46:0,6,51	./.	0/0:4,0:3:2.92:0,3,17	0/1:15,0:15:45.63:174,0,46	0/1:17,0:16:99:114,0,140	0/0:15,0:12:26.94:0,27,525	0/1:16,0:14:77.05:77,0,223	0/0:12,0:10:12.01:0,12,661	0/1:26,0:22:16.65:17,0,1138	0/1:17,0:15:1.23:1,0,703	./.	0/0:9,0:9:6.02:0,6,131	0/0:7,0:7:3.01:0,3,65	0/1:24,0:24:55.65:332,0,56	0/1:15,0:12:5.76:6,0,1154	0/1:20,0:18:0.48:0,0,1840	0/0:3,0:3:9.03:0,9,500
chr10	44619026	.	TAC	T	3713.21	PASS	AB=0.990;AC=33;AF=0.611;AN=54;BaseQRankSum=3.698;DP=376;FS=3.574;HRun=0;HaplotypeScore=104.3585;InbreedingCoeff=0.3106;MQ=50.35;MQ0=13;MQRankSum=-3.493;QD=11.86;ReadPosRankSum=0.946;VQSLOD=2.9992;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:21:0:0,0,0	0/0:4,0:3:3.81:0,4,10	0/0:2,0:1:2.84:0,3,14	0/0:5,0:1:2.90:0,3,16	1/1:24,0:23:5.94:43,6,0	0/0:19,0:19:34.99:0,35,762	0/0:8,0:8:24.06:0,24,360	0/1:41,0:40:9.76:10,0,66	0/0:17,0:17:38.16:0,38,706	1/1:3,12:13:35.16:404,35,0	1/1:6,12:17:9.03:108,9,0	0/0:7,0:6:0.45:0,0,1	1/1:4,0:4:3:25,3,0	1/1:5,0:4:0.47:1,0,0	1/1:0,11:11:21.06:253,21,0	1/1:12,3:14:36.12:499,36,0	1/1:15,1:13:13.41:77,13,0	1/1:15,1:14:35.47:443,35,0	0/1:12,0:9:2.88:117,0,3	0/1:25,2:25:21.22:212,0,21	0/1:17,0:15:3.97:107,0,4	./.	1/1:5,0:5:3:25,3,0	1/1:2,0:2:2.84:14,3,0	1/1:21,5:26:72.23:1015,72,0	0/1:14,0:12:36.45:154,0,36	0/1:20,0:18:47.75:194,0,48	1/1:3,0:3:4.07:13,4,0
chr10	44619203	.	ATC	A	220.40	PASS	AB=0.764;AC=2;AF=0.036;AN=56;BaseQRankSum=5.406;DP=578;FS=0.000;HRun=0;HaplotypeScore=85.4780;InbreedingCoeff=-0.0380;MQ=58.41;MQ0=2;MQRankSum=-4.974;QD=5.65;ReadPosRankSum=2.912;VQSLOD=2.6329;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:54.19:0,54,957	0/1:11,5:16:99:122,0,490	0/0:19,0:11:33.10:0,33,514	0/0:17,0:7:17.98:0,18,277	0/0:22,0:22:60.21:0,60,1059	0/0:24,0:24:72.25:0,72,1277	0/0:11,0:11:30.10:0,30,518	0/0:42,0:42:99:0,123,2103	0/0:23,0:23:63.22:0,63,1118	0/0:22,0:21:60.21:0,60,1055	0/0:19,0:19:54.17:0,54,928	0/0:18,0:18:42.12:0,42,684	0/0:17,0:17:45.15:0,45,798	0/0:17,0:17:48.16:0,48,850	0/0:23,0:23:60.21:0,60,1064	0/0:26,0:26:69.22:0,69,1196	0/1:16,7:23:99:187,0,657	0/0:18,0:18:48.13:0,48,818	0/0:8,0:7:15.05:0,15,255	0/0:26,0:26:69.24:0,69,1209	0/0:26,0:26:72.23:0,72,1249	0/0:15,0:15:39.13:0,39,692	0/0:14,0:14:42.14:0,42,739	0/0:20,0:20:54.18:0,54,940	0/0:22,0:22:66.22:0,66,1140	0/0:32,0:32:93.32:0,93,1636	0/0:29,0:27:78.27:0,78,1382	0/0:8,0:8:24.08:0,24,390
chr10	44619273	.	C	CAG	22140.07	PASS	AB=0.684;AC=42;AF=0.750;AN=56;BaseQRankSum=-5.668;DP=614;FS=1.610;HRun=0;HaplotypeScore=78.4610;InbreedingCoeff=0.8047;MQ=67.51;MQ0=4;MQRankSum=-4.113;QD=45.65;ReadPosRankSum=3.671;VQSLOD=6.4000;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,24:25:66.23:1268,66,0	0/1:5,6:10:99:241,0,157	0/0:23,0:22:51:0,51,666	0/0:17,0:17:41.86:0,42,534	1/1:0,28:28:66.23:1272,66,0	0/0:25,0:25:72.24:0,72,1078	0/0:6,0:6:15.05:0,15,229	0/0:32,0:32:90.28:0,90,1319	0/0:26,0:26:78.24:0,78,1151	1/1:0,26:27:81.25:1485,81,0	1/1:0,22:22:60.21:1155,60,0	1/1:2,21:23:48.16:926,48,0	1/1:0,23:23:54.19:1034,54,0	1/1:1,18:19:51.17:983,51,0	1/1:0,29:30:81.28:1563,81,0	1/1:0,24:24:66.01:1274,66,0	0/1:19,12:30:99:493,0,741	1/1:0,11:11:30.10:579,30,0	1/1:2,16:15:42.12:753,42,0	1/1:3,32:34:81.28:1531,81,0	1/1:1,12:13:30.10:578,30,0	1/1:1,7:8:18.06:347,18,0	1/1:2,9:11:27.08:487,27,0	1/1:0,27:26:69.24:1331,69,0	1/1:1,23:24:63.22:1215,63,0	1/1:1,27:27:81.24:1428,81,0	1/1:2,30:31:78.27:1505,78,0	1/1:0,13:13:36.12:695,36,0
chr10	44619677	.	C	CA	17100.50	PASS	AB=0.711;AC=41;AF=0.732;AN=56;BaseQRankSum=17.139;DP=618;FS=1.127;HRun=2;HaplotypeScore=174.6767;InbreedingCoeff=0.7293;MQ=64.33;MQ0=0;MQRankSum=-5.955;QD=33.93;ReadPosRankSum=4.687;VQSLOD=4.2101;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,18:18:48.16:677,48,0	0/1:11,5:16:99:169,0,293	0/0:12,0:12:36.11:0,36,437	0/0:9,0:8:20.88:0,21,212	1/1:3,21:23:57.19:794,57,0	0/0:22,0:22:66.20:0,66,808	0/0:20,0:20:60.18:0,60,733	0/0:36,0:37:99:0,105,1242	0/0:14,0:14:42.12:0,42,510	1/1:1,28:29:78.26:1095,78,0	1/1:3,25:28:69.23:965,69,0	1/1:1,14:15:42.14:591,42,0	1/1:4,25:29:72.24:1013,72,0	1/1:3,19:22:57.19:803,57,0	1/1:1,16:16:48.16:675,48,0	1/1:0,16:16:39.13:549,39,0	0/1:24,11:35:99:322,0,755	1/1:0,15:15:42.14:592,42,0	1/1:2,13:15:39.13:548,39,0	1/1:3,29:32:84.28:1182,84,0	1/1:1,11:12:33.11:464,33,0	1/1:4,32:36:99:1370,99,0	1/1:8,32:40:99:1358,99,0	0/1:4,7:11:13.12:273,0,13	1/1:1,26:26:72.24:1014,72,0	1/1:1,22:23:63.21:884,63,0	1/1:1,34:35:99:1428,102,0	1/1:1,8:9:24.08:336,24,0
chr10	44620575	.	CA	C	542.35	PASS	AB=0.709;AC=8;AF=0.333;AN=24;BaseQRankSum=6.119;DP=192;FS=4.634;HRun=3;HaplotypeScore=49.0526;InbreedingCoeff=0.3454;MQ=77.86;MQ0=0;MQRankSum=-6.448;QD=10.63;ReadPosRankSum=3.652;VQSLOD=1.4793;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,3:2:3.01:37,3,0	0/1:9,6:14:99:180,0,287	0/0:25,0:24:72.22:0,72,982	0/0:18,0:18:48.16:0,48,687	./.	0/0:27,0:27:78.24:0,78,1083	0/0:24,0:24:69.21:0,69,957	0/0:29,0:29:78.25:0,78,1092	0/0:17,0:17:45.15:0,45,647	./.	./.	./.	./.	./.	./.	./.	0/1:18,13:31:99:354,0,686	./.	./.	1/1:0,1:1:3.01:37,3,0	1/1:0,1:1:3.01:37,3,0	./.	./.	0/0:1,0:1:3.01:0,3,41	./.	./.	./.	./.
chr10	44620714	.	C	CAATT	359.98	PASS	AB=0.830;AC=2;AF=0.111;AN=18;BaseQRankSum=1.951;DP=186;FS=3.545;HRun=0;HaplotypeScore=89.5929;MQ=69.97;MQ0=2;MQRankSum=-3.566;QD=8.00;ReadPosRankSum=1.897;VQSLOD=2.2261;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/1:10,5:14:99:283,0,412	0/0:20,0:11:30.10:0,30,512	0/0:26,0:15:41.35:0,41,709	./.	0/0:28,0:28:81.28:0,81,1501	0/0:16,0:16:42.14:0,42,784	0/0:34,0:34:87.28:0,87,1550	0/0:16,0:16:42.13:0,42,743	./.	./.	./.	./.	./.	./.	./.	0/1:27,3:30:99:155,0,1315	./.	./.	./.	./.	./.	./.	0/0:1,0:1:3.01:0,3,56	./.	./.	./.	./.
chr10	44621170	.	TG	T	538.37	PASS	AB=0.670;AC=2;AF=0.125;AN=16;BaseQRankSum=6.664;DP=180;FS=0.000;HRun=2;HaplotypeScore=80.6389;MQ=90.30;MQ0=1;MQRankSum=-3.016;QD=11.96;ReadPosRankSum=1.387;VQSLOD=2.0818;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	0/1:6,6:12:99:126,0,240	0/0:20,0:18:54.17:0,54,785	0/0:11,1:12:21.07:0,21,315	./.	0/0:35,0:35:99:0,102,1529	0/0:16,0:16:42.13:0,42,608	0/0:26,0:26:75.22:0,75,1042	0/0:26,0:26:75.18:0,75,1075	./.	./.	./.	./.	./.	./.	./.	0/1:17,16:33:99:491,0,621	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.
chr10	44621348	.	AACGTC	A	1299.95	PASS	AB=0.638;AC=2;AF=0.125;AN=16;BaseQRankSum=5.236;DP=207;FS=4.163;HRun=0;HaplotypeScore=137.4090;MQ=73.99;MQ0=0;MQRankSum=-2.205;QD=26.53;ReadPosRankSum=3.705;VQSLOD=3.1257;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/1:8,10:18:99:541,0,392	0/0:28,0:27:78.27:0,78,2358	0/0:26,0:26:69.21:0,69,2000	./.	0/0:29,0:29:87.30:0,87,2640	0/0:15,0:15:45.15:0,45,1304	0/0:37,0:37:99:0,111,3444	0/0:23,0:23:69.19:0,69,2064	./.	./.	./.	./.	./.	./.	./.	0/1:13,18:31:99:837,0,705	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.
chr10	44621449	.	TA	T	267.99	PASS	AB=0.672;AC=2;AF=0.125;AN=16;BaseQRankSum=4.960;DP=182;FS=1.081;HRun=4;HaplotypeScore=64.0345;MQ=64.39;MQ0=1;MQRankSum=-2.334;QD=6.38;ReadPosRankSum=2.547;VQSLOD=-0.0188;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	0/1:2,6:8:63:142,0,63	0/0:28,0:13:36.08:0,36,457	0/0:19,0:10:17.85:0,18,308	./.	0/0:20,0:19:57.18:0,57,780	0/0:17,0:17:48.15:0,48,656	0/0:34,0:34:93.29:0,93,1269	0/0:21,0:21:57.19:0,57,796	./.	./.	./.	./.	./.	./.	./.	0/1:24,10:33:99:203,0,750	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.
chr10	44621514	.	AT	A	552.72	PASS	AC=2;AF=0.167;AN=12;BaseQRankSum=5.755;DP=165;FS=13.951;HRun=6;HaplotypeScore=56.3583;MQ=39.88;MQ0=52;MQRankSum=-5.568;QD=21.26;ReadPosRankSum=-3.779;VQSLOD=1.2827;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	0/0:12,0:12:21.03:0,21,258	./.	./.	./.	0/0:21,0:21:51.17:0,51,671	0/0:13,0:13:30.10:0,30,395	1/1:6,20:21:60.13:634,60,0	0/0:23,0:23:63.20:0,63,828	./.	./.	./.	./.	./.	./.	./.	0/0:25,0:21:42.14:0,42,553	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.
chr10	44621824	.	T	TTTA	498.53	PASS	AB=0.841;AC=2;AF=0.111;AN=18;BaseQRankSum=4.910;DP=212;FS=4.467;HRun=0;HaplotypeScore=97.7952;MQ=75.59;MQ0=6;MQRankSum=-5.084;QD=10.84;ReadPosRankSum=1.072;VQSLOD=2.8120;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	0/1:9,7:17:99:502,0,372	0/0:13,0:11:30.08:0,30,442	0/0:17,0:14:35.40:0,35,370	./.	0/0:32,0:32:96.32:0,96,1592	0/0:11,0:10:30.07:0,30,468	0/0:49,0:48:99:0,144,2238	0/0:28,0:28:81.22:0,81,1338	./.	./.	./.	./.	./.	./.	0/0:1,0:1:3.01:0,3,53	0/1:22,2:23:74.57:75,0,811	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.
chr10	44621913	.	C	CATA	279.92	PASS	AB=0.852;AC=3;AF=0.100;AN=30;BaseQRankSum=4.278;DP=280;FS=15.545;HRun=0;HaplotypeScore=79.4223;InbreedingCoeff=0.3244;MQ=68.46;MQ0=12;MQRankSum=-2.820;QD=10.00;ReadPosRankSum=-1.460;VQSLOD=1.3281;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	0/1:19,4:20:99:295,0,580	0/0:26,0:23:60.16:0,60,1002	0/0:25,0:23:49.19:0,49,813	./.	0/0:27,0:27:75.22:0,75,1251	0/0:10,0:10:30.09:0,30,496	0/0:65,0:57:99:0,153,2370	0/0:25,0:25:75.24:0,75,1290	0/0:9,0:8:23.96:0,24,199	0/0:5,0:4:6.02:0,6,64	./.	./.	./.	0/0:5,0:5:15.01:0,15,151	0/0:8,0:6:9.01:0,9,88	0/0:33,2:28:19.80:0,20,1054	0/0:3,0:3:8.99:0,9,76	./.	./.	./.	./.	./.	./.	0/0:5,0:4:6.01:0,6,56	./.	1/1:0,5:0:3.01:71,3,0	./.
chr10	44622227	.	A	AT	13103.28	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=3.083;DP=597;FS=4.935;HRun=7;HaplotypeScore=105.4673;InbreedingCoeff=0.9977;MQ=75.68;MQ0=0;MQRankSum=-3.115;QD=30.90;ReadPosRankSum=3.097;VQSLOD=4.0214;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,20:23:57.02:634,57,0	0/0:10,0:21:48.33:0,48,333	0/0:19,0:19:44.97:0,45,417	0/0:17,0:17:21.04:0,21,261	1/1:3,29:32:72.18:853,72,0	0/0:27,0:27:75.12:0,75,724	0/0:11,0:11:18.02:0,18,174	0/0:34,0:34:84.11:0,84,807	0/0:18,0:18:51.02:0,51,481	1/1:0,32:32:96.26:1144,96,0	1/1:0,22:22:60.14:708,60,0	1/1:1,18:19:48.10:558,48,0	1/1:3,21:24:60.18:724,60,0	1/1:1,15:16:39.09:455,39,0	1/1:1,20:21:60.07:690,60,0	1/1:1,11:12:33.10:399,33,0	0/0:12,0:25:53.47:0,53,328	1/1:3,19:22:54.17:652,54,0	1/1:4,12:16:36.11:434,36,0	1/1:0,21:21:60.11:693,60,0	1/1:1,15:16:45.14:544,45,0	1/1:1,20:21:60.06:675,60,0	1/1:3,15:18:36.06:418,36,0	1/1:2,8:10:27.06:313,27,0	1/1:2,14:16:36.07:418,36,0	1/1:2,25:27:75.23:906,75,0	1/1:1,33:34:96.29:1159,96,0	1/1:1,21:22:60.18:725,60,0
chr10	44622486	.	A	AT	11943.87	PASS	AB=0.554;AC=38;AF=0.679;AN=56;BaseQRankSum=-12.672;DP=560;FS=4.416;HRun=8;HaplotypeScore=48.2343;InbreedingCoeff=0.8209;MQ=56.99;MQ0=14;MQRankSum=3.305;QD=28.44;ReadPosRankSum=3.825;VQSLOD=5.1038;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:3,13:16:15.81:342,0,16	0/0:4,0:16:26.48:0,26,78	0/0:23,0:8:6:0,6,55	0/0:5,0:2:3:0,3,27	1/1:1,33:34:84.17:940,84,0	0/0:19,0:19:51.01:0,51,462	0/0:14,0:14:36.02:0,36,329	0/0:32,0:31:77.06:0,77,690	0/0:10,0:10:27.01:0,27,247	1/1:6,31:36:99:1141,99,0	1/1:2,31:33:81.24:935,81,0	1/1:0,14:14:39.12:450,39,0	1/1:0,8:8:21.06:242,21,0	1/1:2,17:19:45.13:519,45,0	1/1:2,21:23:63.19:727,63,0	0/1:2,7:10:0.56:230,0,1	0/0:3,0:15:22.40:0,22,66	1/1:2,20:20:57.17:658,57,0	1/1:4,21:23:54.16:617,54,0	1/1:3,29:32:56.78:907,57,0	1/1:1,6:9:13.13:215,13,0	1/1:1,14:15:17.67:457,18,0	1/1:3,15:18:45.13:519,45,0	1/1:1,10:11:30.09:346,30,0	1/1:2,18:20:45.13:519,45,0	1/1:2,21:23:63.18:718,63,0	1/1:6,25:30:44.78:769,45,0	1/1:0,20:20:60.18:692,60,0
chr10	44622521	.	GT	G	293.50	PASS	AB=0.688;AC=2;AF=0.038;AN=52;BaseQRankSum=3.237;DP=547;FS=3.949;HRun=5;HaplotypeScore=76.3032;InbreedingCoeff=-0.0401;MQ=55.96;MQ0=25;MQRankSum=-3.251;QD=7.93;ReadPosRankSum=0.799;VQSLOD=0.0200;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:48.16:0,48,657	0/1:5,9:12:99:205,0,131	./.	./.	0/0:37,0:37:99:0,108,1461	0/0:16,0:16:48.16:0,48,657	0/0:11,0:11:33.11:0,33,451	0/0:27,0:25:63.21:0,63,859	0/0:13,0:13:39.11:0,39,516	0/0:29,0:28:84.23:0,84,1112	0/0:29,0:29:84.28:0,84,1148	0/0:16,0:16:45.15:0,45,616	0/0:9,0:9:24.08:0,24,328	0/0:16,0:16:45.15:0,45,616	0/0:15,0:15:42.13:0,42,558	0/0:15,0:15:45.15:0,45,615	0/1:16,7:15:95.98:177,0,96	0/0:26,0:25:69.14:0,69,863	0/0:22,0:18:54.18:0,54,734	0/0:31,0:31:90.30:0,90,1231	0/0:12,0:12:36.12:0,36,492	0/0:21,0:21:57.19:0,57,779	0/0:24,0:24:69.22:0,69,928	0/0:14,0:14:42.11:0,42,541	0/0:16,0:16:42.13:0,42,559	0/0:22,0:22:63.20:0,63,847	0/0:26,0:26:69.23:0,69,944	0/0:18,0:18:51.13:0,51,661
chr10	44622650	.	A	AT	5596.36	PASS	AB=0.772;AC=16;AF=0.286;AN=56;BaseQRankSum=-15.413;DP=558;FS=4.274;HRun=6;HaplotypeScore=55.9428;InbreedingCoeff=0.8501;MQ=66.25;MQ0=10;MQRankSum=1.791;QD=29.93;ReadPosRankSum=0.412;VQSLOD=5.4838;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,14:14:42.13:528,42,0	0/0:23,0:18:51.12:0,51,520	0/0:17,0:11:23.52:0,24,198	0/1:11,0:6:3.56:4,0,97	1/1:3,21:24:63.16:775,63,0	0/0:18,0:18:54.12:0,54,551	0/0:12,0:12:36.06:0,36,359	0/0:33,0:33:84.17:0,84,851	0/0:12,0:12:33.07:0,33,337	0/0:31,0:31:87.18:0,87,881	0/0:28,0:28:81.18:0,81,826	0/0:19,0:19:57.13:0,57,582	0/0:13,0:13:36.08:0,36,367	0/0:24,0:24:66.15:0,66,673	0/0:18,0:18:51.09:0,51,507	0/0:15,0:15:39.08:0,39,398	0/0:22,0:18:33.07:0,33,337	0/0:17,0:17:48.11:0,48,490	1/1:3,25:25:66.20:816,66,0	1/1:8,23:30:69.22:866,69,0	1/1:0,9:9:27.09:340,27,0	0/0:11,0:11:27.06:0,27,275	0/0:23,0:23:57.13:0,57,582	0/0:14,0:14:36.08:0,36,367	0/0:21,0:21:54.12:0,54,551	0/1:4,21:25:19.62:720,0,20	1/1:0,34:34:93.30:1170,93,0	1/1:0,11:11:30.10:377,30,0
chr10	44622764	.	C	CG	4707.76	PASS	AB=0.569;AC=15;AF=0.278;AN=54;BaseQRankSum=17.046;DP=681;FS=1.604;HRun=0;HaplotypeScore=81.9441;InbreedingCoeff=0.8752;MQ=55.78;MQ0=14;MQRankSum=2.382;QD=27.37;ReadPosRankSum=3.339;VQSLOD=5.4878;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:24:66.22:0,66,922	1/1:5,12:15:38.31:447,38,0	0/0:17,0:1:3.01:0,3,42	./.	0/0:36,0:35:99:0,102,1408	0/0:22,0:22:63.20:0,63,864	0/0:15,0:15:45.11:0,45,597	0/0:33,0:33:84.21:0,84,1090	0/0:17,0:17:51.16:0,51,696	0/0:47,0:47:99:0,129,1773	0/0:32,0:32:93.31:0,93,1300	1/1:1,26:27:61.58:805,62,0	1/1:2,16:16:45.15:575,45,0	1/1:1,21:22:59.07:775,59,0	0/0:34,0:34:99:0,102,1426	0/0:18,0:18:54.18:0,54,755	1/1:14,3:17:7.75:55,8,0	0/0:23,0:22:57.03:0,57,797	0/0:23,0:22:66.21:0,66,906	0/0:32,0:32:93.31:0,93,1301	0/0:31,0:31:93.31:0,93,1299	1/1:4,19:22:15.38:667,15,0	0/1:8,25:32:7.51:840,0,8	1/1:0,14:14:42.14:543,42,0	0/0:25,0:24:69.22:0,69,949	0/0:30,0:29:78.25:0,78,1076	0/0:33,0:32:96.32:0,96,1338	0/0:6,0:6:18.06:0,18,250
chr10	44622765	.	A	AT	5357.20	PASS	AC=16;AF=0.296;AN=54;BaseQRankSum=17.065;DP=677;FS=2.075;HRun=2;HaplotypeScore=79.3365;InbreedingCoeff=0.9423;MQ=55.74;MQ0=14;MQRankSum=-1.429;QD=31.15;ReadPosRankSum=2.830;VQSLOD=4.7173;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:24:48.24:0,48,797	1/1:17,2:16:39.13:554,39,0	0/0:18,0:1:3.01:0,3,37	./.	0/0:36,0:35:99:0,102,1264	0/0:22,0:22:63.20:0,63,781	0/0:15,0:15:42.13:0,42,515	0/0:30,0:30:78.23:0,78,946	0/0:18,0:18:51.16:0,51,632	0/0:44,0:44:99:0,123,1505	0/0:32,0:32:96.29:0,96,1177	1/1:25,0:25:63.21:896,63,0	1/1:19,0:17:48.12:660,48,0	1/1:22,0:22:60.20:852,60,0	0/0:35,0:35:99:0,99,1227	0/0:18,0:18:54.17:0,54,669	1/1:3,15:18:9.03:129,9,0	0/0:23,0:22:60:0,60,726	0/0:23,0:22:66.21:0,66,818	0/0:32,0:32:96.28:0,96,1165	0/0:31,0:31:90.28:0,90,1115	1/1:22,0:21:20.07:727,20,0	1/1:33,0:32:6.98:950,7,0	1/1:14,0:14:42.14:589,42,0	0/0:25,0:24:72.22:0,72,881	0/0:29,0:28:81.24:0,81,992	0/0:33,0:32:96.29:0,96,1178	0/0:6,0:6:15.05:0,15,186
chr10	44623777	.	GC	G	3572.64	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=10.444;DP=610;FS=11.018;HRun=5;HaplotypeScore=57.5794;InbreedingCoeff=0.9607;MQ=56.41;MQ0=18;MQRankSum=2.734;QD=29.77;ReadPosRankSum=1.414;VQSLOD=3.6106;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:63.21:0,63,855	0/0:31,0:20:48.15:0,48,640	0/0:16,0:2:3.01:0,3,38	0/0:17,0:9:15.01:0,15,169	0/0:23,0:23:66.21:0,66,886	0/0:21,0:21:63.20:0,63,846	0/0:6,0:6:18.06:0,18,246	0/0:34,0:34:93.29:0,93,1241	0/0:20,0:20:60.20:0,60,820	0/0:25,0:25:69.21:0,69,910	0/0:22,0:19:54.17:0,54,723	1/1:0,19:19:45.13:510,45,0	1/1:1,21:22:60.17:681,60,0	1/1:0,18:18:54.15:613,54,0	0/0:18,0:18:54.17:0,54,724	0/0:23,0:23:66.18:0,66,855	0/0:35,0:27:57.19:0,57,779	0/0:21,0:21:63.13:0,63,820	0/0:17,0:16:48.11:0,48,621	0/0:23,0:23:69.20:0,69,905	0/0:19,0:19:57.15:0,57,756	1/1:0,21:21:60.17:680,60,0	1/1:1,20:21:51.15:578,51,0	1/1:0,19:19:45.13:510,45,0	0/0:20,0:18:51.17:0,51,695	0/0:29,0:28:84.27:0,84,1136	0/0:33,0:33:99:0,99,1315	0/0:16,0:16:48.16:0,48,656
chr10	44624161	.	AT	A	1329.85	PASS	AB=0.752;AC=26;AF=0.481;AN=54;BaseQRankSum=3.137;DP=457;FS=19.332;HRun=2;HaplotypeScore=60.8760;InbreedingCoeff=0.6530;MQ=64.88;MQ0=10;MQRankSum=-1.979;QD=6.33;ReadPosRankSum=0.285;VQSLOD=-0.7436;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,18:18:10.66:185,11,0	0/1:11,1:10:1.55:2,0,207	0/0:37,0:31:65.14:0,65,709	0/0:19,0:18:23.63:0,24,331	./.	0/0:19,0:19:39.45:0,39,602	0/0:13,0:13:27.16:0,27,341	0/0:21,0:21:22.91:0,23,233	0/0:17,0:17:47.33:0,47,599	1/1:6,18:5:9:82,9,0	1/1:4,14:5:8.93:66,9,0	0/0:18,0:17:36.06:0,36,451	0/0:20,0:20:57.13:0,57,763	0/0:19,0:19:45.08:0,45,557	0/1:3,10:9:64.36:64,0,70	1/1:0,7:3:3.01:38,3,0	0/0:18,0:18:41.42:0,41,481	0/1:3,7:6:31.64:66,0,32	1/1:13,0:11:26.86:203,27,0	1/1:7,3:8:15.02:149,15,0	1/1:2,15:15:15.04:175,15,0	0/0:16,0:16:32.42:0,32,330	0/1:13,1:14:22.63:23,0,241	0/0:22,0:22:52.19:0,52,599	1/1:4,13:8:5.97:45,6,0	1/1:2,10:11:15.01:162,15,0	1/1:0,14:9:12.04:148,12,0	1/1:2,6:7:12:124,12,0
chr10	44624162	.	TTC	T	862.57	PASS	AB=0.977;AC=24;AF=0.444;AN=54;BaseQRankSum=4.197;DP=454;FS=18.123;HRun=0;HaplotypeScore=65.5942;InbreedingCoeff=0.6394;MQ=64.88;MQ0=10;MQRankSum=-2.530;QD=4.45;ReadPosRankSum=0.646;VQSLOD=0.5794;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:21,0:18:7:17,0,7	0/1:12,0:10:5.26:5,0,272	0/0:38,0:31:57.51:0,58,905	0/0:22,0:19:18.51:0,19,473	./.	0/0:20,0:20:54.05:0,54,909	0/0:13,0:13:35.97:0,36,476	0/0:20,0:20:56.61:0,57,453	0/0:17,0:17:51.12:0,51,854	1/1:22,2:5:8.85:67,9,0	1/1:15,3:5:8.93:84,9,0	0/0:17,0:16:39.09:0,39,634	0/0:20,0:20:57.18:0,57,1058	0/0:19,0:19:45.09:0,45,766	0/1:13,0:9:35.87:36,0,93	1/1:7,0:3:2.98:21,3,0	0/0:18,0:18:40.71:0,41,622	0/1:9,1:6:31.06:31,0,43	1/1:4,7:9:24.49:307,24,0	1/1:8,1:7:14.60:123,15,0	1/1:15,2:15:9.75:66,10,0	0/0:16,0:16:35.46:0,35,485	0/0:13,0:13:29.22:0,29,442	0/0:20,0:20:47.97:0,48,760	1/1:14,4:8:6.02:94,6,0	1/1:12,0:10:12.06:66,12,0	1/1:14,0:9:9.22:35,9,0	1/1:6,2:7:10.46:110,10,0
chr10	44624265	.	AAGAC	A	4862.22	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=12.945;DP=577;FS=0.000;HRun=0;HaplotypeScore=104.9363;InbreedingCoeff=0.9946;MQ=56.85;MQ0=9;MQRankSum=-5.623;QD=40.86;ReadPosRankSum=2.394;VQSLOD=4.8333;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:30:78.27:0,78,1982	0/0:8,0:8:21.07:0,21,552	0/0:21,0:10:30.10:0,30,780	0/0:25,0:15:43.69:0,44,1005	0/0:18,0:18:51.16:0,51,1248	0/0:19,0:19:54.19:0,54,1419	0/0:21,0:21:54.19:0,54,1426	0/0:35,0:35:99:0,99,2471	0/0:22,0:22:60.21:0,60,1553	0/0:23,0:22:63.21:0,63,1610	0/0:14,0:14:39.13:0,39,1029	1/1:1,21:21:60.20:1048,60,0	1/1:2,20:22:54.19:993,54,0	1/1:0,24:24:63.21:1121,63,0	0/0:24,0:23:63.21:0,63,1618	0/0:25,0:23:60.20:0,60,1529	0/0:28,0:28:69.24:0,69,1821	0/0:22,0:22:60.18:0,60,1503	0/0:20,0:18:45.14:0,45,1122	0/0:20,0:20:57.16:0,57,1393	0/0:26,0:25:72.25:0,72,1806	1/1:2,15:17:45.07:757,45,0	1/1:0,11:11:30.06:517,30,0	1/1:3,20:23:24.97:427,25,0	0/0:21,0:21:57.20:0,57,1491	0/0:16,0:16:45.15:0,45,1171	0/0:9,0:9:21.07:0,21,540	0/0:6,0:5:15.05:0,15,346
chr10	44624336	.	T	TGA	2547.25	PASS	AB=1.000;AC=40;AF=0.714;AN=56;BaseQRankSum=11.733;DP=330;FS=15.160;HRun=0;HaplotypeScore=133.1658;InbreedingCoeff=0.6092;MQ=74.01;MQ0=10;MQRankSum=-12.168;QD=11.22;ReadPosRankSum=4.000;VQSLOD=2.5559;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:11:8.17:98,8,0	1/1:3,2:5:15.05:202,15,0	0/0:16,0:15:36.09:0,36,477	0/0:19,0:17:44.78:0,45,663	0/1:12,0:12:10.29:71,0,10	0/0:14,0:14:39.13:0,39,596	0/0:18,0:18:54.17:0,54,806	0/0:19,0:14:42.14:0,42,642	0/0:17,0:17:45.15:0,45,689	0/1:9,0:6:7.35:48,0,7	0/1:5,0:3:5.11:15,0,5	1/1:17,0:17:27.88:248,28,0	1/1:15,0:15:29.56:224,30,0	1/1:25,0:25:51:372,51,0	1/1:14,0:13:27.58:228,28,0	1/1:8,0:7:14.83:104,15,0	1/1:2,3:4:3.01:45,3,0	1/1:10,0:9:16.34:105,16,0	1/1:6,0:4:8.89:66,9,0	0/1:7,0:5:1.63:55,0,2	1/1:6,0:4:2.74:12,3,0	1/1:5,0:4:8.69:58,9,0	1/1:6,0:6:8.91:71,9,0	1/1:18,0:18:35.31:244,35,0	1/1:12,0:10:17.39:135,17,0	1/1:11,0:9:24.81:161,25,0	1/1:9,0:8:16.30:132,16,0	1/1:4,0:3:5.93:41,6,0
chr10	44624338	.	C	CG	2258.48	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=11.670;DP=265;FS=25.559;HRun=1;HaplotypeScore=90.3467;InbreedingCoeff=0.7067;MQ=82.14;MQ0=2;MQRankSum=-11.093;QD=13.77;ReadPosRankSum=4.053;VQSLOD=1.5037;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,8:10:23.63:178,24,0	1/1:2,0:2:5.01:27,5,0	0/0:17,0:16:39.11:0,39,525	0/0:19,0:17:48.05:0,48,617	1/1:0,3:3:8.99:76,9,0	0/0:15,0:15:42.12:0,42,554	0/0:20,0:20:57.18:0,57,781	0/0:15,0:15:42.14:0,42,588	0/0:15,0:15:45.15:0,45,629	1/1:2,5:6:0.11:49,0,0	1/1:0,2:1:2.98:22,3,0	1/1:0,12:12:28.82:230,29,0	1/1:2,10:12:27.84:229,28,0	1/1:1,16:17:32.63:261,33,0	1/1:5,9:13:31.57:247,32,0	1/1:4,5:8:14.97:124,15,0	1/1:5,0:4:2.98:21,3,0	1/1:4,5:8:12.02:126,12,0	1/1:1,4:4:8.94:72,9,0	1/1:1,5:4:2.73:69,3,0	1/1:0,3:2:2.04:6,2,0	1/1:0,2:1:3:28,3,0	1/1:0,1:1:1.82:5,2,0	1/1:0,11:11:25.62:197,26,0	1/1:2,6:7:11.97:102,12,0	1/1:4,8:10:20.62:166,21,0	1/1:0,8:7:17.96:149,18,0	1/1:0,2:2:6:54,6,0
chr10	44624339	.	C	CCCCACGTGGAA	20968.29	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=7.651;DP=346;FS=16.675;HRun=0;HaplotypeScore=108.0563;InbreedingCoeff=0.9162;MQ=73.05;MQ0=2;MQRankSum=-12.440;QD=85.58;ReadPosRankSum=-0.526;VQSLOD=3.6272;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:10,8:15:35.96:904,36,0	1/1:3,0:5:15.05:526,15,0	0/0:17,0:17:39.13:0,39,1231	0/0:19,0:17:48.16:0,48,1631	1/1:2,3:5:15.01:531,15,0	0/0:15,0:15:42.13:0,42,1383	0/0:20,0:20:60.19:0,60,1925	0/0:15,0:15:45.14:0,45,1567	0/0:15,0:15:45.15:0,45,1602	1/1:6,5:10:24.08:810,24,0	1/1:2,2:3:8.99:213,9,0	1/1:10,12:20:54.19:2698,54,0	1/1:5,10:15:39.13:1761,39,0	1/1:6,16:21:48.13:2242,48,0	1/1:7,9:15:45.13:1754,45,0	1/1:10,5:13:39.11:1155,39,0	1/1:5,0:6:8.99:192,9,0	1/1:7,5:11:24.03:986,24,0	1/1:4,4:6:18.06:821,18,0	1/1:7,4:8:24:740,24,0	1/1:2,3:4:5.98:76,6,0	1/1:6,2:6:15.05:552,15,0	1/1:5,1:4:11.95:230,12,0	1/1:4,11:15:33.11:1420,33,0	1/1:4,6:8:18.06:638,18,0	1/1:7,8:13:36.12:1356,36,0	1/1:2,7:9:21.07:1047,21,0	1/1:0,2:2:6.02:316,6,0
chr10	44624460	.	A	AC	4478.31	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=-10.281;DP=691;FS=9.535;HRun=5;HaplotypeScore=79.6789;InbreedingCoeff=0.9137;MQ=59.93;MQ0=18;MQRankSum=2.304;QD=27.64;ReadPosRankSum=1.463;VQSLOD=4.7437;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:33:69.17:0,69,741	0/0:15,0:14:36.09:0,36,387	0/1:20,0:5:7.46:7,0,54	0/0:26,1:10:24.02:0,24,235	0/0:27,0:26:63.15:0,63,673	0/0:19,0:19:54.10:0,54,568	0/0:32,0:31:84.08:0,84,884	0/0:26,0:23:50.37:0,50,486	0/0:27,0:27:72.18:0,72,773	0/0:28,0:23:69.03:0,69,710	0/0:17,0:13:33.08:0,33,353	1/1:2,33:34:61.06:1148,61,0	1/1:2,17:19:42.14:551,42,0	1/1:4,20:24:57.18:741,57,0	0/0:18,0:18:48.08:0,48,503	0/0:21,0:21:60.15:0,60,644	0/0:21,0:20:42.07:0,42,440	0/0:47,0:46:99:0,132,1406	0/0:22,0:16:42.07:0,42,440	0/0:16,0:15:42.11:0,42,451	0/0:58,0:55:99:0,132,1404	1/1:1,20:21:51.17:669,51,0	1/1:1,15:16:45.15:591,45,0	1/1:1,25:26:60.16:771,60,0	0/0:29,0:28:75.08:0,75,789	0/0:17,0:16:48.08:0,48,503	0/0:10,0:9:27.07:0,27,290	0/0:16,0:15:45.11:0,45,483
chr10	44625152	.	C	CA	23317.18	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-8.351;DP=802;FS=2.302;HRun=2;HaplotypeScore=78.9068;InbreedingCoeff=1.0000;MQ=68.81;MQ0=1;MQRankSum=-1.521;QD=37.07;ReadPosRankSum=7.774;VQSLOD=4.4204;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,41:43:99:1555,108,0	1/1:0,16:18:48.12:659,48,0	0/0:31,0:31:90.27:0,90,1097	0/0:34,0:35:84.32:0,84,1157	1/1:0,28:28:81.27:1166,81,0	0/0:20,0:20:45.14:0,45,557	0/0:23,0:23:63.15:0,63,763	0/0:38,0:38:99:0,114,1400	0/0:26,0:26:69.22:0,69,854	1/1:1,37:38:99:1597,111,0	1/1:1,19:20:45.12:626,45,0	1/1:1,26:27:69.19:969,69,0	1/1:2,31:33:90.20:1227,90,0	1/1:2,33:35:87.25:1228,87,0	1/1:0,30:30:78.23:1100,78,0	1/1:0,32:32:84.14:1118,84,0	1/1:2,27:37:93.21:1211,93,0	1/1:1,23:24:66.22:950,66,0	1/1:0,22:22:66.22:950,66,0	1/1:0,20:20:57.16:798,57,0	1/1:1,28:29:75.25:1080,75,0	1/1:2,30:32:84.28:1210,84,0	1/1:1,29:30:78.26:1123,78,0	1/1:1,32:33:84.28:1209,84,0	1/1:1,15:16:39.13:560,39,0	1/1:1,33:34:96.32:1382,96,0	1/1:1,28:29:75.18:1035,75,0	1/1:0,13:13:39.13:562,39,0
chr10	44625780	.	T	TCTCTAGATATAA	344.03	PASS	AC=2;AF=0.037;AN=54;BaseQRankSum=-2.126;DP=587;FS=0.000;HRun=0;HaplotypeScore=196.0060;InbreedingCoeff=0.9653;MQ=58.89;MQ0=29;MQRankSum=-0.017;QD=26.46;ReadPosRankSum=-0.850;VQSLOD=2.4115;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:25:57.17:0,57,1988	1/1:2,5:8:11.95:430,12,0	0/0:20,0:15:45.08:0,45,997	0/0:14,0:10:27.09:0,27,931	0/0:30,0:30:75.03:0,75,2668	0/0:17,0:17:39.12:0,39,1369	0/0:20,0:20:54.19:0,54,1885	0/0:31,0:24:75.21:0,75,2671	0/0:21,0:21:57.16:0,57,1996	0/0:21,0:21:60.12:0,60,1857	0/0:23,0:21:51.15:0,51,1786	0/0:15,0:11:33.11:0,33,1230	0/0:19,0:19:57.14:0,57,1959	0/0:21,0:20:48.16:0,48,1786	0/0:20,0:20:57.16:0,57,1950	0/0:17,0:15:39.08:0,39,1335	./.	0/0:18,0:17:42.13:0,42,1514	0/0:16,0:16:42.03:0,42,1008	0/0:24,0:22:54.19:0,54,2076	0/0:21,0:20:54.15:0,54,1896	0/0:31,0:30:75.24:0,75,2728	0/0:26,0:26:60.18:0,60,2114	0/0:14,0:14:36.12:0,36,1388	0/0:20,0:19:48.16:0,48,1829	0/0:25,0:23:66.16:0,66,2234	0/0:36,0:34:99:0,99,3339	0/0:12,0:9:27.09:0,27,1041
chr10	44625926	.	TC	T	7406.74	PASS	AB=0.960;AC=43;AF=0.768;AN=56;BaseQRankSum=1.745;DP=465;FS=17.386;HRun=9;HaplotypeScore=54.9084;InbreedingCoeff=0.8645;MQ=67.88;MQ0=8;MQRankSum=-0.882;QD=19.44;ReadPosRankSum=3.647;VQSLOD=3.6404;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,15:18:42.02:384,42,0	0/0:0,0:5:8.56:0,9,44	0/1:23,1:21:44.30:44,0,197	0/0:18,0:16:27.11:0,27,269	1/1:1,15:14:35.96:319,36,0	0/0:15,0:15:33.07:0,33,362	0/0:11,0:11:27.06:0,27,301	1/1:5,12:18:26.04:272,26,0	0/0:19,0:19:48.14:0,48,552	1/1:0,14:14:39:353,39,0	1/1:3,14:17:41.93:367,42,0	1/1:0,15:15:36.02:329,36,0	1/1:1,16:17:42.02:384,42,0	1/1:0,22:22:63.03:576,63,0	1/1:1,13:14:33.02:302,33,0	1/1:3,17:19:45.02:412,45,0	0/0:5,0:13:20.04:0,20,112	1/1:5,13:18:36.02:329,36,0	1/1:4,12:15:36:323,36,0	1/1:1,9:7:18.01:165,18,0	1/1:3,9:12:29.81:260,30,0	1/1:0,20:20:51.03:467,51,0	1/1:3,12:15:33.02:302,33,0	1/1:0,24:23:54.03:494,54,0	1/1:2,18:19:50.99:459,51,0	1/1:2,16:17:44.98:399,45,0	1/1:3,19:20:45.02:412,45,0	1/1:1,10:10:6:55,6,0
chr10	44626174	.	GAT	G	1510.88	PASS	AB=0.915;AC=21;AF=0.500;AN=42;BaseQRankSum=5.686;DP=260;FS=1.329;HRun=0;HaplotypeScore=66.8776;InbreedingCoeff=0.5528;MQ=58.44;MQ0=4;MQRankSum=-7.868;QD=9.62;ReadPosRankSum=-1.040;VQSLOD=3.2335;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:14:24.03:0,24,334	1/1:1,0:7:17.04:84,17,0	0/0:3,0:2:3.01:0,3,30	0/0:10,0:4:0.47:0,0,1	0/1:13,1:14:8.90:9,0,357	0/1:15,2:17:27.68:28,0,560	./.	1/1:8,18:27:53.99:621,54,0	0/0:8,0:8:9.03:0,9,135	1/1:7,0:7:12:103,12,0	1/1:17,0:17:32.82:257,33,0	./.	./.	./.	1/1:10,0:10:14.94:117,15,0	1/1:6,0:6:11.93:92,12,0	1/1:14,0:11:5.68:28,6,0	1/1:11,0:10:11.82:80,12,0	0/0:11,1:11:15.04:0,15,219	0/0:13,0:12:24.08:0,24,378	0/0:7,0:6:15.03:0,15,217	./.	./.	./.	1/1:12,0:12:26.88:215,27,0	0/0:9,0:8:21.07:0,21,338	0/1:10,1:11:38.69:39,0,221	0/0:16,1:17:0.12:0,0,496
chr10	44626188	.	TATATAA	T	1968.93	PASS	AB=1.000;AC=14;AF=0.280;AN=50;BaseQRankSum=8.066;DP=240;FS=5.904;HRun=0;HaplotypeScore=85.2370;InbreedingCoeff=0.6790;MQ=62.75;MQ0=3;MQRankSum=-8.245;QD=23.16;ReadPosRankSum=1.804;VQSLOD=2.3065;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:27.09:0,27,799	0/1:8,0:8:11.04:111,0,11	0/0:8,0:7:11.09:0,11,121	0/0:8,0:5:6.60:0,7,34	0/0:10,0:10:30.09:0,30,863	0/0:20,0:20:60.16:0,60,1594	0/0:1,0:1:3:0,3,27	0/0:23,0:23:62.28:0,62,951	0/0:6,0:6:15.03:0,15,262	1/1:2,4:5:15.04:239,15,0	1/1:9,11:19:34.54:547,35,0	0/0:2,0:2:6.01:0,6,56	./.	./.	1/1:3,5:8:15.01:240,15,0	1/1:2,3:5:12.04:215,12,0	0/1:17,0:10:26.03:26,0,82	1/1:9,1:9:20.92:270,21,0	0/0:9,0:8:24.06:0,24,573	0/0:12,0:12:36.10:0,36,1045	0/0:8,0:8:21.02:0,21,538	0/0:3,0:3:6.48:0,6,56	0/0:1,0:1:3:0,3,25	./.	1/1:3,8:11:33.09:498,33,0	0/0:8,0:8:24.08:0,24,772	0/0:9,0:9:24.06:0,24,614	0/0:16,0:16:42.13:0,42,1257
chr10	44626191	.	ATAAAC	A	2208.72	PASS	AB=1.000;AC=14;AF=0.269;AN=52;BaseQRankSum=7.449;DP=251;FS=5.952;HRun=0;HaplotypeScore=81.0530;InbreedingCoeff=0.6412;MQ=66.12;MQ0=3;MQRankSum=-9.232;QD=26.61;ReadPosRankSum=0.190;VQSLOD=2.9046;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:32.02:0,32,541	0/1:8,0:8:47.66:108,0,48	0/0:10,0:9:6.25:0,6,282	0/0:9,0:6:9.14:0,9,118	0/0:11,0:11:30.50:0,30,551	0/0:21,0:21:63.19:0,63,1648	0/0:1,0:1:3.01:0,3,67	0/0:23,0:23:30.28:0,30,722	0/0:6,0:6:18.03:0,18,347	1/1:5,0:4:12.04:239,12,0	1/1:21,1:21:41.84:627,42,0	0/0:4,0:4:10.78:0,11,45	./.	0/0:1,0:1:2.60:0,3,10	1/1:6,2:8:16.41:295,16,0	1/1:3,2:5:12.04:241,12,0	0/1:17,0:10:16.21:16,0,214	1/1:6,2:7:18.03:313,18,0	0/0:10,0:9:26.17:0,26,429	0/0:11,0:11:32.65:0,33,679	0/0:9,0:9:21.52:0,22,368	0/0:5,0:5:11.02:0,11,42	0/0:1,0:1:2.60:0,3,10	./.	1/1:10,0:10:30.10:546,30,0	0/0:8,0:8:23.87:0,24,526	0/0:10,0:10:2.80:0,3,347	0/0:15,0:15:39.74:0,40,798
chr10	44626196	.	C	CA	3664.84	PASS	AB=1.000;AC=37;AF=0.712;AN=52;BaseQRankSum=-3.292;DP=255;FS=19.754;HRun=4;HaplotypeScore=57.3796;InbreedingCoeff=0.7618;MQ=67.91;MQ0=3;MQRankSum=-0.478;QD=21.43;ReadPosRankSum=1.000;VQSLOD=2.0486;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,10:10:30.10:409,30,0	0/0:8,0:8:17.90:0,18,69	0/1:11,0:10:4.40:4,0,129	0/0:7,0:5:5.60:0,6,43	1/1:1,10:11:29.97:360,30,0	0/0:20,0:20:57.16:0,57,646	0/0:1,0:1:3.01:0,3,34	0/0:23,0:22:60.08:0,60,624	0/0:4,0:4:12.03:0,12,136	1/1:6,0:5:9.54:46,10,0	1/1:21,0:20:14.68:38,15,0	1/1:0,4:4:12.04:164,12,0	./.	1/1:0,2:2:3.01:41,3,0	1/1:8,0:8:7.33:24,7,0	1/1:5,0:5:6.54:22,7,0	0/0:18,0:11:16.65:0,17,68	1/1:9,0:8:16.77:95,17,0	1/1:2,9:10:26.99:309,27,0	1/1:1,11:12:32.98:379,33,0	1/1:2,7:9:18.06:238,18,0	1/1:0,6:6:12.04:164,12,0	1/1:0,2:2:6.02:82,6,0	./.	1/1:10,0:9:10.65:26,11,0	1/1:1,7:8:21.07:282,21,0	1/1:1,9:10:27.09:368,27,0	1/1:1,15:16:45.15:612,45,0
chr10	44626198	.	A	AC	818.18	PASS	AB=1.000;AC=19;AF=0.352;AN=54;BaseQRankSum=-4.018;DP=259;FS=5.205;HRun=0;HaplotypeScore=66.5974;InbreedingCoeff=0.5293;MQ=67.64;MQ0=3;MQRankSum=4.435;QD=8.02;ReadPosRankSum=2.163;VQSLOD=3.2863;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,0:10:28.75:152,29,0	0/0:7,1:8:10.63:0,11,168	0/0:11,0:10:22.49:0,22,222	0/0:8,0:7:14.97:0,15,150	1/1:10,0:10:20.93:112,21,0	0/0:19,0:19:57.19:0,57,797	0/0:1,0:1:3.01:0,3,42	0/0:23,0:22:60.20:0,60,834	0/0:4,0:4:12.04:0,12,168	0/0:6,0:5:7.20:0,7,37	0/0:21,0:20:44.80:0,45,222	1/1:4,0:4:11.19:52,11,0	0/0:1,0:1:3:0,3,27	1/1:2,0:2:2.80:13,3,0	0/0:8,0:8:18.63:0,19,87	0/0:5,0:5:10.41:0,10,41	0/0:15,6:14:21.03:0,21,213	0/0:9,0:8:8.27:0,8,34	0/1:11,0:10:10.42:59,0,10	0/1:12,0:12:1.76:88,0,2	0/1:9,0:9:0.92:63,0,1	1/1:6,0:6:11.19:52,11,0	0/1:3,0:3:16.14:19,0,16	./.	0/0:10,0:9:24.17:0,24,101	0/1:8,0:8:6.55:66,0,7	1/1:11,0:11:1.78:100,2,0	1/1:16,0:16:42.97:221,43,0
chr10	44626199	.	A	ATT	64.14	PASS	AB=0.948;AC=8;AF=0.148;AN=54;BaseQRankSum=7.803;DP=262;FS=0.844;HRun=0;HaplotypeScore=74.9673;InbreedingCoeff=0.1508;MQ=69.11;MQ0=3;MQRankSum=-8.036;QD=0.75;ReadPosRankSum=-0.777;VQSLOD=1.5417;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:29.81:0,30,228	0/1:8,1:9:23.32:62,0,23	0/0:12,0:11:26.99:0,27,344	0/0:8,0:7:13.73:0,14,194	0/0:10,0:10:29.88:0,30,249	0/0:19,0:19:57.19:0,57,930	0/0:1,0:1:3.01:0,3,49	0/0:23,0:22:60.19:0,60,921	0/0:4,0:4:12.04:0,12,196	0/1:6,0:5:0.44:2,0,0	0/1:21,0:20:1.16:38,0,1	0/0:4,0:4:12:0,12,104	0/0:1,0:1:3.01:0,3,48	0/0:3,0:3:3:0,3,26	0/1:8,0:8:5.15:5,0,14	0/0:5,0:5:3.72:0,4,23	0/1:16,6:15:16.81:55,0,17	0/1:9,0:8:8.45:8,0,29	0/0:10,0:9:26.88:0,27,241	0/0:12,0:12:34.90:0,35,311	0/0:8,0:8:17.98:0,18,150	0/0:7,0:7:11.99:0,12,103	0/0:3,0:3:9:0,9,95	./.	1/1:10,0:9:2.22:5,2,0	0/0:8,0:8:23.98:0,24,204	0/0:11,0:11:32.91:0,33,291	0/0:16,0:16:44.90:0,45,361
chr10	44626200	.	A	AATT	3175.52	PASS	AB=0.952;AC=35;AF=0.648;AN=54;BaseQRankSum=4.656;DP=273;FS=13.470;HRun=0;HaplotypeScore=69.0502;InbreedingCoeff=0.3511;MQ=69.73;MQ0=6;MQRankSum=-3.906;QD=15.12;ReadPosRankSum=3.385;VQSLOD=2.0104;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,0:10:23.41:75,23,0	0/1:5,0:10:5.82:165,0,6	0/0:12,0:11:0.04:0,0,254	0/1:9,0:8:11.03:11,0,122	1/1:10,0:10:13.62:95,14,0	0/0:19,0:19:57.20:0,57,1034	0/0:1,0:1:3.01:0,3,54	0/0:24,0:23:63.09:0,63,930	0/0:4,0:4:12.04:0,12,218	1/1:1,6:5:15.05:280,15,0	1/1:1,19:20:56.89:797,57,0	1/1:4,0:4:9.49:30,9,0	0/0:1,0:1:3.01:0,3,33	0/1:3,0:3:2.20:2,0,19	1/1:2,6:8:23.91:343,24,0	1/1:2,3:5:14.84:206,15,0	1/1:16,0:18:3.27:139,3,0	1/1:4,6:9:20.73:325,21,0	1/1:10,0:8:19.86:85,20,0	0/1:12,0:12:14:94,0,14	1/1:8,0:8:11.64:38,12,0	0/1:7,0:7:11.90:18,0,12	0/1:3,0:3:7.35:7,0,26	./.	1/1:0,10:9:27.09:440,27,0	1/1:7,0:7:15.47:48,15,0	0/1:15,0:13:39.38:40,0,39	1/1:16,0:16:34.93:111,35,0
chr10	44626660	.	G	GC	96.61	PASS	AB=0.903;AC=3;AF=0.065;AN=46;BaseQRankSum=4.957;DP=713;FS=0.000;HRun=1;HaplotypeScore=88.8498;InbreedingCoeff=0.5648;MQ=67.93;MQ0=32;MQRankSum=-2.972;QD=2.84;ReadPosRankSum=0.303;VQSLOD=-0.5755;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,144,1852	0/1:25,3:25:59.70:60,0,766	0/0:27,0:28:81.22:0,81,1022	0/0:24,0:23:60.19:0,60,763	0/0:21,6:19:54.16:0,54,686	0/0:26,0:23:69.22:0,69,896	0/0:21,0:21:63.14:0,63,797	0/0:35,0:35:99:0,102,1290	0/0:29,0:27:75.23:0,75,960	0/0:31,0:28:81.26:0,81,1039	0/0:23,0:21:60.14:0,60,759	1/1:1,5:3:9.03:132,9,0	./.	./.	0/0:31,0:25:75.24:0,75,973	0/0:33,0:29:87.25:0,87,1099	0/0:56,5:59:9.17:0,9,1902	0/0:26,0:25:75.21:0,75,956	0/0:22,0:22:63.17:0,63,799	0/0:47,0:42:99:0,117,1470	0/0:32,0:32:90.29:0,90,1168	./.	./.	./.	0/0:17,0:16:48.16:0,48,623	0/0:28,2:26:78.25:0,78,1002	0/0:43,0:36:99:0,105,1348	0/0:14,0:14:39.11:0,39,490
chr10	44626730	.	G	GA	946.23	PASS	AB=0.693;AC=2;AF=0.043;AN=46;BaseQRankSum=8.180;DP=608;FS=8.001;HRun=1;HaplotypeScore=83.2610;InbreedingCoeff=-0.0500;MQ=66.91;MQ0=19;MQRankSum=-0.501;QD=13.33;ReadPosRankSum=1.897;VQSLOD=2.3773;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:29:84.25:0,84,1060	0/1:14,8:21:99:243,0,442	0/0:15,0:15:44.41:0,44,475	0/0:28,0:27:50.02:0,50,636	0/0:28,0:28:78.22:0,78,979	0/0:25,0:21:66.20:0,66,842	0/0:17,0:14:42.12:0,42,526	0/0:42,0:35:99:0,102,1311	0/0:25,0:20:60.20:0,60,777	0/0:36,0:35:99:0,102,1303	0/0:24,0:22:51.16:0,51,658	./.	./.	./.	0/0:23,0:18:51.15:0,51,647	0/0:27,0:19:54.18:0,54,700	0/1:23,26:49:99:790,0,579	0/0:20,0:19:51.17:0,51,661	0/0:27,0:25:75.22:0,75,945	0/0:36,0:33:96.27:0,96,1212	0/0:35,0:34:99:0,99,1225	0/0:5,0:3:2.94:0,3,18	./.	./.	0/0:13,0:13:39.09:0,39,486	0/0:26,0:24:69.21:0,69,882	0/0:37,0:33:96.29:0,96,1216	0/0:2,0:2:6.02:0,6,78
chr10	44627252	.	A	AT	2228.53	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-0.968;DP=550;FS=4.684;HRun=9;HaplotypeScore=59.3561;InbreedingCoeff=0.9450;MQ=59.28;MQ0=27;MQRankSum=3.377;QD=17.14;ReadPosRankSum=2.614;VQSLOD=3.9760;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:41:89.43:0,89,912	1/1:5,0:11:6.24:59,6,0	0/0:15,0:14:28.28:0,28,229	0/0:7,0:6:3:0,3,26	0/0:18,0:17:50.99:0,51,442	0/0:21,0:21:59.98:0,60,517	0/0:20,0:20:34.36:0,34,442	0/0:31,0:23:47.94:0,48,413	0/0:12,0:12:32.98:0,33,286	1/1:1,13:14:39.11:431,39,0	1/1:1,6:6:15.04:166,15,0	0/0:22,0:21:50.97:0,51,442	0/0:13,0:13:35.97:0,36,308	0/0:15,0:12:32.99:0,33,286	1/1:2,13:15:12.91:343,13,0	1/1:1,18:18:48.13:531,48,0	1/1:1,0:27:53.97:270,54,0	1/1:2,11:13:33.09:365,33,0	0/0:22,0:22:56.97:0,57,494	0/0:25,0:23:62.91:0,63,538	0/0:18,0:17:35.97:0,36,312	0/0:21,0:21:53.97:0,54,468	0/0:25,1:24:29.83:0,30,488	0/0:26,0:25:62.48:0,62,546	1/1:2,13:13:24.06:265,24,0	0/0:18,1:19:17.80:0,18,381	0/0:16,0:15:44.99:0,45,390	0/0:17,0:16:47.99:0,48,416
chr10	44627546	.	C	CT	427.25	PASS	AB=0.705;AC=2;AF=0.036;AN=56;BaseQRankSum=5.191;DP=739;FS=0.876;HRun=6;HaplotypeScore=72.5873;InbreedingCoeff=-0.0373;MQ=56.82;MQ0=29;MQRankSum=-3.122;QD=4.59;ReadPosRankSum=-0.641;VQSLOD=-0.6347;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,9:41:99:0,114,1154	0/1:12,7:17:39.34:39,0,270	0/0:11,0:10:24.05:0,24,245	0/0:10,0:11:29.28:0,29,282	0/0:19,0:19:51.11:0,51,520	0/0:19,0:19:54.12:0,54,551	0/0:40,0:40:99:0,99,1002	0/0:22,0:21:48.10:0,48,484	0/0:36,0:36:99:0,99,992	0/0:25,0:24:63.13:0,63,636	0/0:14,0:12:36.06:0,36,358	0/0:27,0:27:78.14:0,78,786	0/0:21,0:21:54.10:0,54,543	0/0:26,0:26:72.16:0,72,735	0/0:34,1:30:87.18:0,87,881	0/0:27,0:26:66.14:0,66,673	0/1:39,35:70:99:477,0,914	0/0:19,0:17:39.08:0,39,398	0/0:24,1:23:60.11:0,60,603	0/0:18,0:15:36.08:0,36,365	0/0:49,1:49:99:0,135,1367	0/0:25,0:25:69.14:0,69,697	0/0:17,0:17:48.11:0,48,489	0/0:24,0:24:69.14:0,69,697	0/0:30,0:28:66.14:0,66,673	0/0:25,0:24:63.14:0,63,643	0/0:21,0:21:54.11:0,54,545	0/0:9,0:9:21.05:0,21,214
chr10	44627760	.	T	TC	226.44	PASS	AB=0.737;AC=2;AF=0.036;AN=56;BaseQRankSum=6.334;DP=665;FS=5.033;HRun=0;HaplotypeScore=76.0642;InbreedingCoeff=-0.0371;MQ=58.81;MQ0=1;MQRankSum=-4.503;QD=4.04;ReadPosRankSum=-0.683;VQSLOD=2.6581;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:96.27:0,96,1298	0/1:9,5:14:99:135,0,318	0/0:12,0:12:36.04:0,36,432	0/0:15,0:14:25.38:0,25,367	0/0:17,0:17:51.04:0,51,651	0/0:12,0:12:33.01:0,33,385	0/0:43,0:43:99:0,129,1734	0/0:28,0:28:74.42:0,74,1103	0/0:24,0:24:72.24:0,72,1001	0/0:26,0:26:78.21:0,78,1064	0/0:19,0:19:57.17:0,57,765	0/0:36,0:36:99:0,108,1424	0/0:25,0:25:72.21:0,72,978	0/0:25,0:25:74.98:0,75,888	0/0:32,0:32:93.14:0,93,1197	0/0:24,0:24:69.20:0,69,938	0/1:27,15:40:99:180,0,896	0/0:19,0:19:51.15:0,51,692	0/0:18,0:17:51.11:0,51,629	0/0:16,0:16:48.13:0,48,624	0/0:38,0:38:99:0,114,1542	0/0:27,0:27:66.21:0,66,903	0/0:19,0:19:57.10:0,57,733	0/0:30,0:30:81.23:0,81,1091	0/0:14,0:14:39.13:0,39,544	0/0:22,0:22:66.21:0,66,892	0/0:26,0:25:61.39:0,61,934	0/0:10,0:10:27.08:0,27,362
chr10	44628053	.	ACACTAGC	A	6012.03	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=11.114;DP=761;FS=21.276;HRun=0;HaplotypeScore=199.2193;InbreedingCoeff=0.9979;MQ=66.10;MQ0=20;MQRankSum=-13.612;QD=58.37;ReadPosRankSum=0.944;VQSLOD=3.4375;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:45:99:0,111,4388	0/0:16,0:16:42.14:0,42,1609	0/0:26,0:24:69.08:0,69,2087	0/0:25,0:24:60.17:0,60,2013	0/0:21,0:17:51.18:0,51,2063	0/0:33,0:33:93.26:0,93,3569	0/0:30,0:30:87.28:0,87,3383	0/0:27,0:26:78.27:0,78,2939	0/0:36,0:36:99:0,105,3995	0/0:30,0:30:84.29:0,84,3424	0/0:18,0:18:54.17:0,54,2034	1/1:0,14:14:39.13:1043,39,0	1/1:0,15:15:42.14:1130,42,0	1/1:1,11:12:24.08:646,24,0	0/0:31,0:31:90.27:0,90,3552	0/0:17,0:17:48.11:0,48,1758	0/0:55,0:52:99:0,127,4918	0/0:22,0:22:63.19:0,63,2480	0/0:22,0:16:48.16:0,48,1902	0/0:21,0:17:45.15:0,45,1837	0/0:79,0:74:99:0,211,8174	1/1:5,23:26:60.21:1540,60,0	1/1:0,17:17:48.16:1186,48,0	1/1:2,15:14:18.06:466,18,0	0/0:18,0:18:54.19:0,54,2102	0/0:40,0:36:99:0,108,4204	0/0:32,0:30:84.27:0,84,3184	0/0:13,0:13:39.13:0,39,1597
chr10	44628102	.	C	CACGA	585.59	PASS	AB=0.809;AC=2;AF=0.036;AN=56;BaseQRankSum=5.430;DP=712;FS=4.124;HRun=0;HaplotypeScore=149.9595;InbreedingCoeff=-0.0371;MQ=62.61;MQ0=2;MQRankSum=-5.444;QD=8.61;ReadPosRankSum=-0.643;VQSLOD=2.6227;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,1:43:99:0,126,2438	0/1:10,5:13:99:217,0,446	0/0:27,0:27:78.26:0,78,1461	0/0:21,0:19:57.19:0,57,1075	0/0:21,0:21:63.22:0,63,1224	0/0:21,0:21:54.18:0,54,1020	0/0:25,0:25:66.21:0,66,1225	0/0:29,0:28:81.27:0,81,1566	0/0:34,0:34:93.30:0,93,1785	0/0:36,0:36:99:0,108,2086	0/0:11,0:11:30.10:0,30,565	0/0:22,0:22:60.21:0,60,1189	0/0:16,0:16:48.13:0,48,912	0/0:16,0:16:45.10:0,45,861	0/0:37,0:37:99:0,111,2216	0/0:18,0:18:54.19:0,54,1061	0/1:45,8:49:99:457,0,1896	0/0:28,0:28:81.28:0,81,1600	0/0:21,0:21:47.27:0,47,1103	0/0:18,0:18:51.17:0,51,1019	0/0:50,1:50:99:0,144,2787	0/0:16,0:14:33.07:0,33,544	0/0:24,0:24:66.14:0,66,1163	0/0:26,0:24:60.21:0,60,1149	0/0:16,0:16:39.13:0,39,760	0/0:29,0:29:87.28:0,87,1687	0/0:26,0:26:72.25:0,72,1406	0/0:11,0:11:30.08:0,30,566
chr10	44628559	.	ACT	A	671.02	PASS	AB=0.636;AC=2;AF=0.036;AN=56;BaseQRankSum=7.529;DP=741;FS=2.877;HRun=0;HaplotypeScore=72.1839;InbreedingCoeff=-0.0457;MQ=52.00;MQ0=24;MQRankSum=-3.288;QD=10.32;ReadPosRankSum=0.825;VQSLOD=3.1873;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:41:99:0,102,1809	0/1:10,14:18:99:284,0,264	0/0:15,0:1:3.01:0,3,47	0/0:16,0:3:9.03:0,9,154	0/0:29,0:28:72.25:0,72,1276	0/0:30,0:30:84.29:0,84,1482	0/0:13,0:12:27.09:0,27,478	0/0:38,0:33:78.27:0,78,1365	0/0:21,0:21:63.22:0,63,1107	0/0:26,0:26:69.24:0,69,1218	0/0:17,0:17:51.17:0,51,904	0/0:28,0:28:78.27:0,78,1384	0/0:25,0:25:57.20:0,57,1005	0/0:31,0:31:72.23:0,72,1232	0/0:35,0:34:78.27:0,78,1364	0/0:21,0:21:51.17:0,51,897	0/1:18,23:31:99:475,0,312	0/0:19,0:16:33.11:0,33,586	0/0:22,0:16:45.15:0,45,787	0/0:32,0:31:81.28:0,81,1430	0/0:33,0:31:69.23:0,69,1205	0/0:31,0:31:78.27:0,78,1364	0/0:17,0:16:42.14:0,42,745	0/0:22,0:22:48.16:0,48,851	0/0:29,0:29:84.27:0,84,1451	0/0:30,0:30:87.30:0,87,1539	0/0:36,0:36:81.28:0,81,1434	0/0:17,0:16:45.15:0,45,798
chr10	44628779	.	T	TTA	559.30	PASS	AB=0.776;AC=2;AF=0.038;AN=52;BaseQRankSum=5.696;DP=724;FS=0.000;HRun=0;HaplotypeScore=83.9586;InbreedingCoeff=-0.0530;MQ=43.29;MQ0=79;MQRankSum=-1.608;QD=6.58;ReadPosRankSum=2.400;VQSLOD=2.8659;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:32:42.10:0,42,594	0/1:9,3:12:91.13:91,0,195	./.	./.	0/0:27,0:26:36.08:0,36,504	0/0:22,0:20:48.16:0,48,707	0/0:18,0:16:36.08:0,36,505	0/0:25,0:20:57.17:0,57,803	0/0:27,0:26:60.19:0,60,866	0/0:30,0:28:84.25:0,84,1212	0/0:23,0:23:54.18:0,54,793	0/0:25,0:24:60.17:0,60,854	0/0:29,0:28:60.19:0,60,862	0/0:21,0:19:21.07:0,21,304	0/0:28,0:27:66.19:0,66,947	0/0:20,0:19:51.14:0,51,724	0/1:49,24:65:99:556,0,313	0/0:28,0:20:36.10:0,36,510	0/0:22,0:13:30.07:0,30,416	0/0:33,0:28:63.02:0,63,881	0/0:17,0:6:3.01:0,3,44	0/0:22,0:19:33.01:0,33,418	0/0:28,0:28:53.93:0,54,770	0/0:23,0:22:12.04:0,12,177	0/0:9,0:8:18:0,18,220	0/0:36,0:33:96.28:0,96,1389	0/0:26,0:26:69.19:0,69,991	0/0:3,0:3:6.02:0,6,88
chr10	44629866	.	T	TG	379.96	PASS	AC=34;AF=1.000;AN=34;DP=37;FS=0.000;HRun=0;HaplotypeScore=13.7322;InbreedingCoeff=-0.0750;MQ=58.75;MQ0=0;QD=13.57;VQSLOD=3.7394;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,1:4:5.74:37,6,0	./.	./.	./.	1/1:1,1:2:5.31:26,5,0	./.	./.	1/1:2,0:2:5.93:40,6,0	1/1:1,1:2:5.97:46,6,0	1/1:1,0:1:3:25,3,0	1/1:1,0:1:3:27,3,0	1/1:2,0:2:5.97:47,6,0	1/1:1,1:2:5.36:32,5,0	./.	./.	1/1:0,1:1:2.74:12,3,0	1/1:2,0:2:2.97:20,3,0	1/1:2,0:2:2.98:21,3,0	1/1:0,1:1:2.37:8,2,0	./.	./.	1/1:1,0:1:3:27,3,0	./.	1/1:1,1:2:5.80:39,6,0	1/1:1,0:1:2.94:18,3,0	1/1:0,1:1:2.50:9,2,0	1/1:1,0:1:2.97:20,3,0	./.
chr10	44632387	.	A	AG	589.83	PASS	AB=0.712;AC=2;AF=0.036;AN=56;BaseQRankSum=6.771;DP=623;FS=18.406;HRun=2;HaplotypeScore=80.2054;InbreedingCoeff=-0.0374;MQ=62.42;MQ0=0;MQRankSum=-0.943;QD=8.43;ReadPosRankSum=1.023;VQSLOD=-0.1939;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:84.26:0,84,1041	0/1:10,8:17:99:254,0,286	0/0:12,0:12:33.10:0,33,409	0/0:20,0:19:47.92:0,48,552	0/0:21,0:21:57.18:0,57,706	0/0:21,0:21:63.19:0,63,768	0/0:30,0:30:84.26:0,84,1041	0/0:30,0:30:84.26:0,84,1030	0/0:22,0:22:66.21:0,66,815	0/0:26,1:27:38.13:0,38,912	0/0:20,0:19:51.16:0,51,631	0/0:23,0:23:66.21:0,66,818	0/0:17,0:17:48.15:0,48,595	0/0:20,0:20:60.19:0,60,744	0/0:25,0:25:69.22:0,69,855	0/0:21,0:21:63.18:0,63,767	0/1:33,19:51:99:425,0,1054	0/0:10,0:10:27.08:0,27,335	0/0:23,0:23:57.18:0,57,707	0/0:17,0:17:51.16:0,51,630	0/0:36,0:36:99:0,102,1264	0/0:26,0:23:63.20:0,63,780	0/0:9,0:9:21.07:0,21,260	0/0:26,0:26:78.10:0,78,928	0/0:15,0:15:45.12:0,45,543	0/0:21,0:21:57.15:0,57,690	0/0:23,0:22:66.19:0,66,806	0/0:8,0:7:21.07:0,21,260
chr10	44632429	.	A	AG	553.89	PASS	AB=0.732;AC=2;AF=0.036;AN=56;BaseQRankSum=5.549;DP=598;FS=0.000;HRun=2;HaplotypeScore=73.5656;InbreedingCoeff=-0.0457;MQ=59.89;MQ0=5;MQRankSum=-1.403;QD=8.15;ReadPosRankSum=-1.146;VQSLOD=0.4391;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:84.25:0,84,1028	0/1:11,9:18:99:214,0,288	0/0:22,0:17:51.13:0,51,602	0/0:18,0:14:33.10:0,33,409	0/0:23,0:22:63.20:0,63,780	0/0:12,0:12:30.09:0,30,372	0/0:23,0:23:63.18:0,63,764	0/0:29,0:29:75.23:0,75,913	0/0:20,0:20:57.18:0,57,704	0/0:27,0:27:78.25:0,78,967	0/0:15,0:14:39.12:0,39,480	0/0:17,0:17:48.14:0,48,582	0/0:15,0:15:45.14:0,45,557	0/0:16,0:16:48.12:0,48,579	0/0:27,0:27:78.25:0,78,966	0/0:20,0:20:60.18:0,60,731	0/1:34,14:48:99:429,0,1003	0/0:14,0:14:1.01:0,1,408	0/0:19,0:19:57.18:0,57,705	0/0:19,0:19:51.16:0,51,632	0/0:31,0:31:87.26:0,87,1066	0/0:27,0:23:63.20:0,63,775	0/0:19,0:19:54.16:0,54,656	0/0:19,0:19:57.18:0,57,707	0/0:12,0:12:33.10:0,33,409	0/0:20,0:20:54.12:0,54,640	0/0:25,0:24:66.21:0,66,818	0/0:13,0:12:30.07:0,30,357
chr10	44632831	.	AT	A	942.13	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.690;DP=526;FS=2.265;HRun=6;HaplotypeScore=54.0515;InbreedingCoeff=0.9941;MQ=63.78;MQ0=6;MQRankSum=1.148;QD=18.47;ReadPosRankSum=1.671;VQSLOD=3.2371;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:78.19:0,78,990	1/1:11,12:15:33.08:355,33,0	0/0:9,0:7:17.92:0,18,196	0/0:11,0:8:24.06:0,24,281	0/0:26,0:26:75.24:0,75,981	0/0:18,0:18:54.18:0,54,708	0/0:16,0:16:48.15:0,48,622	0/0:21,0:20:57.18:0,57,747	0/0:12,0:12:30.10:0,30,395	0/0:20,0:20:54.18:0,54,710	0/0:17,0:17:51.17:0,51,666	0/0:18,0:18:51.16:0,51,663	0/0:22,0:22:63.19:0,63,813	0/0:15,0:15:45.15:0,45,590	0/0:19,0:19:54.18:0,54,707	0/0:15,0:15:42.14:0,42,553	1/1:4,24:28:66.17:709,66,0	0/0:12,0:12:36.08:0,36,442	0/0:26,0:21:60.19:0,60,789	0/0:29,0:29:87.28:0,87,1140	0/0:14,0:14:42.14:0,42,552	0/0:22,0:22:63.20:0,63,829	0/0:21,0:21:60.20:0,60,789	0/0:15,0:15:45.14:0,45,578	0/0:14,0:14:39.13:0,39,511	0/0:20,0:20:60.20:0,60,789	0/0:17,0:16:45.15:0,45,592	0/0:18,0:18:54.17:0,54,704
chr10	44633481	.	CT	C	370.11	PASS	AB=0.772;AC=3;AF=0.054;AN=56;BaseQRankSum=6.682;DP=557;FS=4.076;HRun=9;HaplotypeScore=59.5605;InbreedingCoeff=-0.0154;MQ=55.76;MQ0=3;MQRankSum=-1.259;QD=6.27;ReadPosRankSum=0.006;VQSLOD=0.6485;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:75.18:0,75,849	0/1:6,8:13:65.75:83,0,66	0/1:13,0:9:2.56:3,0,84	0/0:15,0:10:19.73:0,20,167	0/0:33,0:33:72.20:0,72,820	0/0:26,0:26:66.20:0,66,762	0/0:17,0:17:42.08:0,42,468	0/0:27,0:26:66.10:0,66,721	0/0:14,0:14:30.08:0,30,338	0/0:35,1:35:87.26:0,87,1004	0/0:24,1:25:29.70:0,30,592	0/0:9,0:9:27.06:0,27,301	0/0:11,0:11:33.08:0,33,370	0/0:12,0:12:30.08:0,30,338	0/0:16,0:15:45.13:0,45,519	0/0:22,0:22:54.16:0,54,621	0/1:6,17:28:13.19:375,0,13	0/0:12,0:12:29.76:0,30,323	0/0:19,0:19:39.12:0,39,450	0/0:33,1:33:62.80:0,63,976	0/0:12,0:12:30.09:0,30,346	0/0:18,0:18:42.08:0,42,470	0/0:20,0:20:42.12:0,42,485	0/0:14,0:14:36.03:0,36,387	0/0:21,0:21:51.15:0,51,589	0/0:22,0:22:60.18:0,60,693	0/0:21,0:21:63.19:0,63,727	0/0:12,0:12:24.07:0,24,275
chr10	44633805	.	ATTG	A	265.60	PASS	AB=0.621;AC=3;AF=0.056;AN=54;BaseQRankSum=4.430;DP=612;FS=0.000;HRun=0;HaplotypeScore=88.5253;InbreedingCoeff=0.5575;MQ=47.23;MQ0=14;MQRankSum=-4.035;QD=7.38;ReadPosRankSum=0.699;VQSLOD=2.6949;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:39:51.17:0,51,1089	0/1:7,11:12:99:126,0,180	./.	0/0:7,0:1:3.01:0,3,54	0/0:26,0:26:66.23:0,66,1406	0/0:27,0:26:51.17:0,51,1071	0/0:34,0:26:36.12:0,36,706	0/0:31,0:18:45.11:0,45,946	0/0:23,0:22:33.11:0,33,712	0/0:22,0:19:57.16:0,57,1175	0/0:25,0:25:36.12:0,36,780	0/0:17,0:17:29.82:0,30,661	0/0:25,0:23:44.58:0,45,908	0/0:23,0:23:39.13:0,39,837	0/0:27,0:27:42.14:0,42,921	0/0:15,0:14:39.13:0,39,846	1/1:5,13:11:15.05:240,15,0	0/0:22,0:21:35.81:0,36,794	0/0:21,0:13:36.12:0,36,757	0/0:18,0:18:45.15:0,45,993	0/0:45,0:33:72.25:0,72,1528	0/0:19,0:19:45.15:0,45,992	0/0:12,0:12:27.09:0,27,596	0/0:20,0:19:45.15:0,45,993	0/0:15,0:15:20.58:0,21,463	0/0:23,0:23:60.20:0,60,1266	0/0:18,0:18:48.07:0,48,941	0/0:19,0:17:39.13:0,39,860
chr10	44633897	.	TTGC	T	3501.26	PASS	AB=0.515;AC=11;AF=0.196;AN=56;BaseQRankSum=3.143;DP=705;FS=5.100;HRun=0;HaplotypeScore=129.8525;InbreedingCoeff=0.8837;MQ=55.85;MQ0=20;MQRankSum=2.662;QD=28.47;ReadPosRankSum=5.295;VQSLOD=3.5319;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:52:99:0,108,1564	0/0:13,0:10:21.07:0,21,451	0/0:24,0:18:51.18:0,51,1102	0/0:18,0:15:40.59:0,41,736	0/0:30,0:29:45.15:0,45,676	0/0:21,0:21:54.17:0,54,1149	0/0:36,0:33:75.12:0,75,1626	0/0:41,0:24:72.25:0,72,1589	0/0:26,0:26:66.23:0,66,1454	1/1:7,13:13:24.08:386,24,0	1/1:5,19:22:39.60:627,40,0	0/0:19,0:18:32.98:0,33,728	0/0:20,0:20:51.10:0,51,1117	0/0:26,0:25:51.17:0,51,1109	1/1:3,18:20:39.13:627,39,0	0/1:1,16:15:27.11:539,0,27	0/0:18,0:15:27.09:0,27,595	1/1:1,23:24:54.14:840,54,0	0/0:30,0:19:54.18:0,54,739	0/0:33,0:32:78.26:0,78,1136	0/0:37,0:35:90.30:0,90,1270	0/0:28,0:27:45.15:0,45,992	0/0:15,0:14:33.11:0,33,708	0/0:31,0:30:63.20:0,63,1322	1/1:2,15:17:30.10:482,30,0	0/0:32,0:30:78.26:0,78,1110	0/0:20,0:20:54.18:0,54,802	0/0:10,0:9:18.06:0,18,261
chr10	44638447	.	AT	A	35.29	PASS	AC=6;AF=0.75;AN=8;BaseQRankSum=0.727;DP=22;FS=6.021;HRun=3;HaplotypeScore=9.1170;MQ=57.55;MQ0=2;MQRankSum=-0.727;QD=8.82;ReadPosRankSum=0.727;VQSLOD=0.6349;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:1,0:1:3:0,3,27	./.	./.	./.	./.	./.	1/1:1,0:1:3.01:33,3,0	1/1:0,1:1:3.01:37,3,0	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	1/1:0,2:1:3.01:36,3,0	./.	./.
chr10	44638454	.	GA	G	308.90	PASS	AC=18;AF=0.900;AN=20;BaseQRankSum=1.187;DP=35;FS=14.819;HRun=2;HaplotypeScore=13.8253;InbreedingCoeff=0.1331;MQ=64.12;MQ0=4;MQRankSum=-2.282;QD=16.26;ReadPosRankSum=-1.004;VQSLOD=1.4121;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	1/1:0,1:1:3.01:36,3,0	0/0:4,0:3:3.69:0,4,85	./.	1/1:1,1:2:2.74:12,3,0	./.	./.	./.	1/1:0,1:1:3.01:36,3,0	1/1:0,2:2:6.02:78,6,0	./.	./.	./.	./.	./.	./.	./.	./.	1/1:1,1:1:3.01:39,3,0	1/1:0,2:1:3.01:39,3,0	./.	./.	1/1:0,4:2:6.02:77,6,0	./.	1/1:0,3:3:3.01:36,3,0	1/1:0,2:1:3.01:38,3,0	./.	./.
chr10	44638492	.	AG	A	3233.06	PASS	AB=1.000;AC=47;AF=0.979;AN=48;BaseQRankSum=-1.476;DP=139;FS=0.000;HRun=1;HaplotypeScore=24.5775;InbreedingCoeff=-0.0585;MQ=44.85;MQ0=5;MQRankSum=1.647;QD=25.66;ReadPosRankSum=1.048;VQSLOD=3.3297;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,9:8:21.07:293,21,0	1/1:0,2:2:6.02:84,6,0	0/1:7,0:3:10.03:10,0,21	./.	1/1:0,8:8:18.06:251,18,0	1/1:0,5:3:3.01:42,3,0	1/1:0,5:3:9.03:126,9,0	./.	1/1:0,4:4:9.03:126,9,0	1/1:1,10:10:27.08:378,27,0	1/1:0,6:6:9.03:126,9,0	1/1:0,2:2:3.01:42,3,0	1/1:0,4:3:9.03:126,9,0	./.	1/1:0,5:4:3.01:42,3,0	1/1:0,2:2:6.02:84,6,0	1/1:0,2:2:6.02:84,6,0	1/1:0,3:3:9.03:126,9,0	1/1:0,3:1:3.01:42,3,0	1/1:0,8:7:15.05:210,15,0	1/1:0,5:5:12.04:168,12,0	1/1:0,7:6:15.05:210,15,0	1/1:0,11:9:27.09:377,27,0	1/1:0,2:2:3.01:42,3,0	1/1:0,5:5:6.02:84,6,0	1/1:0,5:3:9.03:126,9,0	1/1:0,4:4:9.03:126,9,0	./.
chr10	44638947	.	TTG	T	2929.52	PASS	AB=0.600;AC=11;AF=0.212;AN=52;BaseQRankSum=5.885;DP=597;FS=1.026;HRun=0;HaplotypeScore=62.8087;InbreedingCoeff=0.8786;MQ=47.71;MQ0=33;MQRankSum=-1.990;QD=24.62;ReadPosRankSum=-1.066;VQSLOD=3.8411;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:30:66.23:0,66,1255	0/0:11,0:9:15.05:0,15,289	./.	./.	0/0:28,0:26:39.13:0,39,750	0/0:18,0:18:45.14:0,45,824	0/0:23,0:19:42.13:0,42,716	0/0:41,0:15:39.12:0,39,719	0/0:25,0:25:66.21:0,66,1240	1/1:2,32:29:78.22:1111,78,0	1/1:1,26:22:32.99:450,33,0	0/0:20,0:20:45.15:0,45,869	0/0:23,0:23:60.19:0,60,1116	0/0:16,0:16:33.11:0,33,637	1/1:1,20:19:36.12:550,36,0	1/1:0,14:14:30.10:459,30,0	0/0:30,0:29:72.25:0,72,1378	0/1:2,4:6:76.13:123,0,76	0/0:16,0:7:24.08:0,24,450	0/0:24,0:22:45.15:0,45,855	0/0:17,0:15:27.09:0,27,509	0/0:20,0:19:42.14:0,42,804	0/0:26,0:24:39.13:0,39,752	0/0:26,0:26:60.19:0,60,1099	1/1:1,16:13:27.09:412,27,0	0/0:23,0:23:48.15:0,48,882	0/0:34,0:34:81.24:0,81,1459	0/0:13,0:12:18.06:0,18,325
chr10	44639648	.	TTTGA	T	495.37	PASS	AB=0.654;AC=3;AF=0.058;AN=52;BaseQRankSum=5.376;DP=529;FS=6.543;HRun=0;HaplotypeScore=62.9916;InbreedingCoeff=0.5547;MQ=48.10;MQ0=36;MQRankSum=-1.657;QD=21.54;ReadPosRankSum=-0.355;VQSLOD=2.4324;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:20:39.13:0,39,941	1/1:1,5:5:9.03:170,9,0	./.	./.	0/0:38,0:37:84.29:0,84,2198	0/0:13,0:13:24.08:0,24,647	0/0:13,0:10:12.04:0,12,323	0/0:32,0:23:63.17:0,63,1451	0/0:15,0:15:42.13:0,42,1041	0/0:30,0:27:78.27:0,78,2076	0/0:29,0:26:45.15:0,45,1168	0/0:11,0:11:21.07:0,21,551	0/0:13,0:13:30.10:0,30,789	0/0:8,0:8:21.07:0,21,566	0/0:13,0:12:30.10:0,30,809	0/0:16,0:15:36.12:0,36,964	0/1:8,9:14:99:421,0,189	0/0:25,0:23:42.14:0,42,1080	0/0:28,0:17:51.18:0,51,1374	0/0:32,0:31:72.25:0,72,1887	0/0:7,0:7:12.04:0,12,291	0/0:29,0:28:66.23:0,66,1670	0/0:16,0:16:30.10:0,30,808	0/0:20,0:20:39.13:0,39,1051	0/0:9,0:9:18.06:0,18,486	0/0:24,0:23:66.23:0,66,1780	0/0:22,0:21:57.20:0,57,1516	0/0:11,0:10:18.06:0,18,477
chr10	44640615	.	TG	T	5106.23	PASS	AB=0.760;AC=22;AF=0.393;AN=56;BaseQRankSum=15.920;DP=961;FS=49.340;HRun=1;HaplotypeScore=136.6517;InbreedingCoeff=-0.6302;MQ=53.01;MQ0=5;MQRankSum=-12.356;QD=6.82;ReadPosRankSum=0.724;VQSLOD=-0.4463;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:27,21:48:99:458,0,975	0/0:32,0:26:60.19:0,60,865	0/0:16,0:12:36.11:0,36,509	0/0:18,0:14:18.71:0,19,539	0/1:29,16:42:99:126,0,1111	0/1:20,7:27:99:210,0,773	0/1:16,3:19:32.09:32,0,613	0/1:22,9:26:82.67:83,0,808	0/1:21,8:29:99:105,0,845	0/1:33,13:45:99:349,0,1275	0/1:18,15:29:99:335,0,681	0/1:26,8:34:99:174,0,1046	0/1:18,5:23:23.07:23,0,716	0/1:22,7:29:99:169,0,841	0/1:22,12:34:99:261,0,867	0/1:19,11:30:99:332,0,765	0/0:85,0:80:99:0,199,2903	0/1:17,7:23:99:144,0,652	0/1:23,9:25:99:238,0,653	0/1:26,14:35:99:192,0,1041	0/1:17,9:26:99:220,0,613	0/0:25,6:31:33.59:0,34,985	0/0:28,2:30:39.61:0,40,1081	0/1:12,2:14:2.50:2,0,500	0/1:17,14:26:99:181,0,674	0/1:37,18:50:99:377,0,1396	0/1:41,23:62:99:514,0,1643	0/1:13,22:33:99:581,0,474
chr10	44640937	.	T	TA	1581.28	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=10.484;DP=617;FS=19.430;HRun=2;HaplotypeScore=73.1549;InbreedingCoeff=0.5267;MQ=53.04;MQ0=8;MQRankSum=-5.047;QD=10.76;ReadPosRankSum=-0.102;VQSLOD=0.3417;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:30:43.71:0,44,829	1/1:2,20:14:30.08:412,30,0	0/0:13,0:10:30.09:0,30,362	0/0:4,0:3:9.03:0,9,112	0/0:38,0:27:66.13:0,66,786	0/0:22,0:21:60.19:0,60,744	0/0:13,0:12:36.11:0,36,446	0/0:22,0:22:60.17:0,60,721	0/0:22,0:21:57.09:0,57,672	0/0:33,0:30:20.01:0,20,809	0/0:22,0:15:19.85:0,20,495	0/0:23,0:22:57.18:0,57,706	0/0:14,0:14:34.34:0,34,399	0/0:14,0:13:39.12:0,39,483	0/0:24,0:24:69.20:0,69,843	0/0:16,0:14:42.12:0,42,508	1/1:8,32:37:68.53:1115,69,0	0/0:6,0:6:12.04:0,12,149	0/0:17,0:13:39.11:0,39,471	0/0:37,0:31:78.24:0,78,956	0/0:18,0:18:51.14:0,51,618	0/0:21,0:21:54.11:0,54,641	0/0:24,0:23:66.21:0,66,817	0/0:9,0:9:24.07:0,24,287	0/1:26,0:20:3.62:4,0,574	0/1:33,0:29:6.75:7,0,800	0/0:28,0:25:8.56:0,9,720	0/1:26,0:23:99:179,0,353
chr10	44640939	.	A	AG	965.26	PASS	AB=0.788;AC=9;AF=0.161;AN=56;BaseQRankSum=11.842;DP=607;FS=25.274;HRun=0;HaplotypeScore=71.9148;InbreedingCoeff=0.3110;MQ=53.31;MQ0=7;MQRankSum=-5.700;QD=4.73;ReadPosRankSum=-0.827;VQSLOD=1.1935;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,1:28:32.82:0,33,973	1/1:20,0:14:28.69:194,29,0	0/0:13,0:10:30.09:0,30,403	0/0:4,0:3:9.03:0,9,126	0/0:30,12:30:75.11:0,75,952	0/0:21,1:21:63.20:0,63,864	0/0:12,1:12:36.12:0,36,503	0/0:20,0:20:60.20:0,60,838	0/0:19,2:20:57.12:0,57,771	0/1:25,6:28:12.82:13,0,927	0/0:17,5:15:3.99:0,4,546	0/0:22,1:22:63.19:0,63,847	0/0:12,1:13:22.04:0,22,447	0/0:14,1:14:39.13:0,39,545	0/0:24,0:24:69.23:0,69,964	0/0:14,1:14:42.13:0,42,570	1/1:39,0:36:26.78:464,27,0	0/0:6,0:6:17.94:0,18,209	0/0:16,1:14:39.12:0,39,528	0/0:28,8:29:81.24:0,81,1112	0/0:17,0:17:51.15:0,51,694	0/0:19,0:19:54.12:0,54,717	0/0:23,1:23:69.20:0,69,943	0/0:8,1:9:24.07:0,24,320	0/1:17,8:19:37.43:37,0,656	0/1:25,8:29:57.51:58,0,932	0/1:23,4:24:25.25:25,0,811	0/1:14,14:25:99:326,0,467
chr10	44641139	.	CA	C	486.72	PASS	AB=0.699;AC=1;AF=0.020;AN=50;BaseQRankSum=4.445;DP=526;FS=1.983;HRun=2;HaplotypeScore=67.6607;InbreedingCoeff=-0.0246;MQ=42.35;MQ0=53;MQRankSum=-1.369;QD=7.49;ReadPosRankSum=1.113;VQSLOD=1.0265;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:39:72.22:0,72,1056	./.	./.	./.	0/0:17,0:12:24.08:0,24,357	0/0:20,0:19:54.18:0,54,806	0/0:17,0:15:42.09:0,42,577	0/0:23,0:21:63.16:0,63,895	0/0:17,0:17:51.17:0,51,764	0/0:13,0:7:21.07:0,21,302	0/0:11,0:8:15.01:0,15,195	0/0:19,0:16:39.13:0,39,584	0/0:23,0:18:30.09:0,30,429	0/0:18,0:16:39.09:0,39,559	0/0:15,0:14:36.09:0,36,483	0/0:18,0:17:33.11:0,33,494	0/1:37,28:55:99:561,0,819	0/0:15,0:14:27.09:0,27,404	0/0:25,0:14:42.14:0,42,628	0/0:14,0:8:18.06:0,18,269	0/0:41,0:35:57.62:0,58,805	0/0:11,0:10:24.08:0,24,359	0/0:8,0:7:15.05:0,15,224	0/0:10,0:10:18.06:0,18,270	0/0:8,0:5:12.04:0,12,171	0/0:17,0:15:45.15:0,45,674	0/0:15,0:14:27.09:0,27,404	0/0:9,0:9:15.05:0,15,214
chr10	44641650	.	GT	G	954.89	PASS	AB=0.752;AC=13;AF=0.260;AN=50;BaseQRankSum=5.054;DP=604;FS=5.030;HRun=9;HaplotypeScore=58.7306;InbreedingCoeff=0.4235;MQ=30.73;MQ0=208;MQRankSum=2.608;QD=5.03;ReadPosRankSum=-0.465;VQSLOD=0.3267;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,1:19:35.98:0,36,371	0/1:11,7:20:71.59:129,0,72	./.	./.	0/0:34,1:30:37.31:0,37,402	0/0:29,0:18:18.05:0,18,208	0/0:15,0:3:3.01:0,3,35	0/0:35,0:10:27.08:0,27,311	0/0:26,0:19:23.99:0,24,247	1/1:14,15:11:33.02:302,33,0	1/1:2,19:17:24:220,24,0	0/0:8,0:7:11.95:0,12,109	0/0:18,0:10:5.98:0,6,55	0/0:17,0:14:15.04:0,15,173	./.	0/1:3,8:7:22.57:70,0,23	0/1:25,19:23:99:101,0,176	1/1:2,12:12:18.01:165,18,0	0/0:17,0:9:21.06:0,21,242	0/0:44,0:43:99:0,111,1266	0/1:16,1:6:12.47:12,0,109	0/0:21,0:13:24.07:0,24,277	0/0:19,0:15:30.09:0,30,346	0/1:9,1:7:12.42:12,0,123	1/1:2,13:14:11.99:110,12,0	0/0:32,0:20:55.05:0,55,625	0/0:22,0:11:11.99:0,12,124	0/0:13,0:10:21.06:0,21,242
chr10	44642279	.	T	TG	40.80	PASS	AB=0.775;AC=2;AF=0.036;AN=56;BaseQRankSum=1.825;DP=540;FS=6.810;HRun=0;HaplotypeScore=98.3120;InbreedingCoeff=-0.0570;MQ=51.79;MQ0=13;MQRankSum=-0.753;QD=0.72;ReadPosRankSum=-0.736;VQSLOD=0.6042;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:4:4.25:0,4,29	0/1:19,6:15:57.02:57,0,86	0/0:26,0:20:49.78:0,50,653	0/0:25,0:15:36.32:0,36,410	0/0:29,0:25:30.59:0,31,175	0/0:36,0:35:99:0,108,1372	0/0:16,0:16:48.15:0,48,641	0/0:20,0:14:32.39:0,32,212	0/0:20,0:20:54.15:0,54,701	0/0:24,0:17:45.94:0,46,339	0/0:22,0:16:34.31:0,34,241	0/0:13,0:13:31.50:0,32,302	0/0:18,0:18:46.03:0,46,368	0/0:15,0:15:35.43:0,35,301	0/0:18,0:13:35.63:0,36,249	0/0:13,0:12:26.99:0,27,178	0/1:21,11:20:72.18:72,0,133	0/0:6,0:3:5.98:0,6,47	0/0:9,0:4:5.75:0,6,39	0/0:20,0:14:26.21:0,26,184	0/0:19,0:11:4.82:0,5,32	0/0:22,0:21:35.71:0,36,353	0/0:20,0:18:46.49:0,46,447	0/0:11,0:11:33.05:0,33,364	0/0:23,0:19:38.26:0,38,248	0/0:19,0:16:31.74:0,32,209	0/0:21,0:19:32.36:0,32,268	0/0:7,0:5:7.53:0,8,30
chr10	44642282	.	TTTGTGTGTGTGTG	T	1051.66	PASS	AB=0.921;AC=7;AF=0.125;AN=56;BaseQRankSum=6.569;DP=550;FS=14.234;HRun=0;HaplotypeScore=185.6188;InbreedingCoeff=-0.1769;MQ=51.90;MQ0=12;MQRankSum=-4.005;QD=6.53;ReadPosRankSum=0.472;VQSLOD=1.7789;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:4:4.23:0,4,25	0/1:14,10:14:99:335,0,285	0/0:27,0:21:54.48:0,54,3140	0/0:23,0:15:40.18:0,40,2224	0/1:31,0:27:99:141,0,168	0/0:37,0:36:99:0,111,6488	0/0:17,0:17:51.16:0,51,2676	0/0:21,0:16:8.85:0,9,1196	0/0:20,0:20:60.20:0,60,3409	0/0:23,0:17:24.82:0,25,1645	0/1:21,0:15:33.85:34,0,1104	0/0:13,0:13:35.49:0,35,1256	0/0:19,0:19:47.73:0,48,1061	0/0:16,0:16:40.23:0,40,1225	0/1:18,0:13:11.85:12,0,943	0/1:13,0:12:32.43:32,0,712	0/1:19,10:17:99:612,0,125	0/0:4,0:2:2.99:0,3,24	0/0:8,0:5:12.01:0,12,472	0/0:21,0:15:15.75:0,16,209	0/0:20,0:13:4.83:0,5,136	0/0:22,0:21:41.80:0,42,1504	0/0:20,0:18:43.59:0,44,1355	0/0:11,0:11:33.02:0,33,1242	0/0:24,0:20:40.34:0,40,2237	0/1:25,0:22:11.31:11,0,813	0/0:22,0:20:1.73:0,2,637	0/0:10,0:8:8.06:0,8,345
chr10	44642283	.	T	TTTTTTTGTG	8212.05	PASS	AB=0.960;AC=36;AF=0.643;AN=56;BaseQRankSum=2.644;DP=581;FS=3.391;HRun=0;HaplotypeScore=187.0437;InbreedingCoeff=-0.0030;MQ=51.72;MQ0=12;MQRankSum=-6.900;QD=17.18;ReadPosRankSum=-6.428;VQSLOD=1.4537;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,0:7:12.02:180,12,0	0/1:29,0:18:99:134,0,232	0/0:28,0:22:47.93:0,48,1087	0/1:24,0:15:51.10:51,0,620	1/1:18,9:31:1.98:453,2,0	0/0:37,0:36:99:0,108,2450	0/0:17,0:17:48.03:0,48,1021	0/1:2,0:17:73.63:74,0,156	0/0:21,0:21:57.15:0,57,1296	0/1:23,0:17:75.34:547,0,75	0/1:20,0:14:16.25:441,0,16	0/1:13,0:13:99:133,0,160	0/1:19,0:19:99:431,0,124	0/1:16,0:16:99:163,0,167	1/1:18,0:13:8.25:431,8,0	1/1:13,0:12:12.12:554,12,0	0/1:36,0:24:99:103,0,375	1/1:5,0:3:3.01:41,3,0	1/1:3,0:7:15.91:244,16,0	1/1:5,8:17:26.99:551,27,0	1/1:7,5:14:8.99:161,9,0	0/1:22,0:21:95.28:95,0,262	0/1:20,0:18:99:247,0,162	0/1:12,0:12:99:100,0,234	1/1:24,0:20:16.30:760,16,0	1/1:8,10:23:32.92:1146,33,0	1/1:23,0:21:48.12:835,48,0	1/1:2,6:10:9.03:337,9,0
chr10	44642512	.	TC	T	1203.62	PASS	AB=0.709;AC=2;AF=0.036;AN=56;BaseQRankSum=10.597;DP=744;FS=0.562;HRun=4;HaplotypeScore=86.6794;InbreedingCoeff=-0.0379;MQ=59.52;MQ0=18;MQRankSum=-4.682;QD=9.40;ReadPosRankSum=2.277;VQSLOD=0.6590;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:45:99:0,123,1693	0/1:22,16:32:99:441,0,547	0/0:20,0:13:22.48:0,22,329	0/0:14,0:9:14.92:0,15,164	0/0:34,0:32:96.21:0,96,1264	0/0:19,0:19:48.15:0,48,655	0/0:11,0:11:24.08:0,24,336	0/0:31,0:28:75.22:0,75,1014	0/0:24,0:24:66.22:0,66,923	0/0:46,0:43:99:0,117,1542	0/0:21,0:20:48.14:0,48,638	0/0:25,0:25:72.21:0,72,973	0/0:21,0:21:57.19:0,57,797	0/0:20,0:20:45.15:0,45,630	0/0:31,0:31:81.26:0,81,1117	0/0:27,0:27:75.23:0,75,1017	0/1:54,36:81:99:851,0,1467	0/0:9,0:8:24.05:0,24,315	0/0:18,0:12:27.08:0,27,378	0/0:23,0:23:60.20:0,60,838	0/0:19,0:18:53.98:0,54,681	0/0:16,0:16:48.16:0,48,672	0/0:26,0:26:78.26:0,78,1090	0/0:28,0:27:63.21:0,63,878	0/0:16,0:16:45.14:0,45,614	0/0:28,0:28:84.25:0,84,1139	0/0:31,0:30:75.21:0,75,1026	0/0:12,0:12:36.12:0,36,504
chr10	44642909	.	GT	G	217.28	PASS	AB=0.776;AC=2;AF=0.036;AN=56;BaseQRankSum=-0.573;DP=573;FS=2.008;HRun=8;HaplotypeScore=114.3352;InbreedingCoeff=-0.0373;MQ=59.17;MQ0=8;MQRankSum=0.233;QD=3.45;ReadPosRankSum=0.386;VQSLOD=0.1692;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:17:41.69:0,42,302	0/1:8,7:18:74.66:75,0,187	0/0:20,0:16:42.12:0,42,490	0/0:14,0:10:24.05:0,24,274	0/0:40,0:40:95.30:0,95,690	0/0:19,0:19:57.17:0,57,688	0/0:8,0:8:21.06:0,21,253	0/0:29,0:24:37.58:0,38,284	0/0:15,0:15:45.13:0,45,530	0/0:33,0:33:90.27:0,90,1077	0/0:26,0:26:57.16:0,57,672	0/0:14,0:14:42.11:0,42,484	0/0:22,0:22:63.19:0,63,752	0/0:17,0:17:48.12:0,48,558	0/0:18,0:18:51.14:0,51,604	0/0:15,0:15:36.11:0,36,435	0/1:24,10:38:99:231,0,522	0/0:12,0:12:30.06:0,30,345	0/0:15,0:14:32.46:0,32,220	0/0:25,0:25:68.27:0,68,468	0/0:16,0:16:41.55:0,42,281	0/0:15,0:15:39.11:0,39,461	0/0:21,0:21:48.15:0,48,579	0/0:14,0:14:30.08:0,30,350	0/0:19,0:19:42.13:0,42,507	0/0:18,0:18:41.13:0,41,249	0/0:27,0:27:80.26:0,80,572	0/0:18,0:18:50.56:0,51,352
chr10	44643406	.	T	TC	777.56	PASS	AB=0.711;AC=2;AF=0.036;AN=56;BaseQRankSum=0.668;DP=679;FS=17.144;HRun=2;HaplotypeScore=103.6132;InbreedingCoeff=-0.0371;MQ=54.42;MQ0=6;MQRankSum=2.548;QD=7.93;ReadPosRankSum=0.526;VQSLOD=-0.1932;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,1:24:69.18:0,69,838	0/1:11,12:21:99:183,0,190	0/0:26,0:16:45.04:0,45,489	0/0:24,0:18:45.97:0,46,533	0/0:26,0:26:72.21:0,72,878	0/0:26,0:26:78.23:0,78,954	0/0:13,0:13:36.11:0,36,446	0/0:35,0:31:87.24:0,87,1034	0/0:19,0:19:51.16:0,51,632	0/0:21,0:20:63.20:0,63,781	0/0:24,0:24:69.22:0,69,853	0/0:16,0:16:45.14:0,45,558	0/0:14,0:14:36.10:0,36,433	0/0:15,0:15:45.09:0,45,508	0/0:18,0:18:54.17:0,54,669	0/0:30,0:30:84.25:0,84,1028	0/1:52,23:65:99:684,0,632	0/0:19,1:20:54.08:0,54,624	0/0:23,0:21:60.19:0,60,744	0/0:26,0:26:72.23:0,72,890	0/0:34,0:34:99:0,99,1226	0/0:24,0:24:63.20:0,63,780	0/0:16,0:16:48.15:0,48,594	0/0:21,0:21:57.15:0,57,680	0/0:17,0:17:42.09:0,42,503	0/0:24,0:24:72.23:0,72,892	0/0:29,0:29:84.25:0,84,1029	0/0:14,0:14:42.13:0,42,520
chr10	44645144	.	AT	A	717.11	PASS	AB=0.720;AC=2;AF=0.036;AN=56;BaseQRankSum=8.593;DP=652;FS=0.000;HRun=5;HaplotypeScore=75.5527;InbreedingCoeff=-0.0370;MQ=59.10;MQ0=16;MQRankSum=-0.849;QD=8.75;ReadPosRankSum=1.120;VQSLOD=0.1170;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:69.22:0,69,927	0/1:16,12:24:99:314,0,309	0/0:22,0:18:41.63:0,42,631	0/0:19,0:16:47.90:0,48,596	0/0:21,0:20:57.19:0,57,779	0/0:16,0:16:48.15:0,48,641	0/0:25,0:25:66.17:0,66,867	0/0:26,0:26:78.25:0,78,1051	0/0:17,0:17:48.16:0,48,656	0/0:31,0:30:84.27:0,84,1136	0/0:32,0:30:87.28:0,87,1173	0/0:19,0:19:57.19:0,57,779	0/0:22,0:21:57.19:0,57,779	0/0:18,0:17:45.15:0,45,613	0/0:28,0:25:72.24:0,72,985	0/0:17,0:16:42.14:0,42,574	0/1:35,19:50:99:492,0,760	0/0:17,0:17:48.16:0,48,656	0/0:17,0:17:51.17:0,51,697	0/0:24,0:24:69.18:0,69,914	0/0:18,0:17:48.15:0,48,640	0/0:20,0:20:57.19:0,57,780	0/0:21,0:21:60.20:0,60,819	0/0:13,0:13:36.12:0,36,493	0/0:28,0:27:81.26:0,81,1094	0/0:23,0:22:63.21:0,63,862	0/0:36,0:33:99:0,105,1414	0/0:13,0:13:39.13:0,39,533
chr10	44645241	.	CT	C	2248.73	PASS	AB=0.616;AC=7;AF=0.135;AN=52;BaseQRankSum=1.965;DP=698;FS=4.009;HRun=6;HaplotypeScore=84.5325;InbreedingCoeff=0.1671;MQ=41.46;MQ0=105;MQRankSum=-0.838;QD=13.31;ReadPosRankSum=1.726;VQSLOD=2.9758;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:26:49:0,49,614	0/0:30,0:34:91.72:0,92,693	./.	./.	0/0:31,0:27:39.07:0,39,479	0/0:18,0:18:42.14:0,42,552	0/0:21,0:19:39.11:0,39,491	0/0:21,0:13:39.13:0,39,512	0/0:20,0:20:38.83:0,39,513	0/1:13,31:38:99:852,0,129	0/1:10,21:27:27.79:432,0,28	0/0:16,0:16:27.08:0,27,335	0/0:24,0:22:38.73:0,39,475	0/0:19,0:17:36.12:0,36,474	0/1:11,13:21:88.36:196,0,88	0/1:12,10:19:99:245,0,191	0/0:47,0:44:68.47:0,68,747	1/1:3,18:13:18.04:193,18,0	0/0:21,0:18:51.14:0,51,654	0/0:38,0:33:93.30:0,93,1223	0/0:19,0:11:27.05:0,27,337	0/0:11,0:10:21.06:0,21,262	0/0:26,0:26:54.17:0,54,697	0/0:11,0:10:15.05:0,15,197	0/1:6,21:23:22.99:464,0,23	0/0:22,1:19:21.93:0,22,639	0/0:47,0:40:90.27:0,90,1167	0/0:12,0:6:15.05:0,15,197
chr10	44647175	.	GC	G	737.30	PASS	AB=0.668;AC=2;AF=0.036;AN=56;BaseQRankSum=8.058;DP=600;FS=6.061;HRun=4;HaplotypeScore=71.0541;InbreedingCoeff=-0.0430;MQ=65.05;MQ0=3;MQRankSum=-1.851;QD=9.33;ReadPosRankSum=0.956;VQSLOD=0.4459;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,111,1505	0/1:9,12:20:99:246,0,175	0/0:23,0:18:3.96:0,4,372	0/0:16,0:11:19.58:0,20,250	0/0:19,0:19:42.14:0,42,587	0/0:17,0:17:48.16:0,48,672	0/0:18,0:18:54.18:0,54,756	0/0:13,0:10:24.07:0,24,319	0/0:25,0:25:69.23:0,69,964	0/0:21,0:21:63.18:0,63,847	0/0:10,0:10:24.04:0,24,313	0/0:25,0:25:75.22:0,75,1029	0/0:13,0:13:39.10:0,39,510	0/0:33,0:32:96.32:0,96,1344	0/0:23,0:23:69.22:0,69,948	0/0:11,0:11:33.10:0,33,445	0/1:33,25:54:99:581,0,953	0/0:22,0:22:66.21:0,66,907	0/0:15,0:13:39.13:0,39,546	0/0:20,0:20:54.17:0,54,730	0/0:30,0:30:84.26:0,84,1140	0/0:16,0:16:42.14:0,42,588	0/0:13,0:12:33.04:0,33,419	0/0:24,0:24:69.23:0,69,966	0/0:16,0:16:45.15:0,45,629	0/0:17,0:17:51.15:0,51,680	0/0:31,0:30:90.30:0,90,1260	0/0:9,0:9:27.08:0,27,361
chr10	44647893	.	AG	A	3780.31	PASS	AC=12;AF=0.231;AN=52;BaseQRankSum=8.292;DP=744;FS=10.162;HRun=1;HaplotypeScore=56.8589;InbreedingCoeff=0.9804;MQ=49.71;MQ0=68;MQRankSum=1.374;QD=29.77;ReadPosRankSum=0.325;VQSLOD=2.1110;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:81.28:0,81,1294	0/0:43,0:38:87.30:0,87,1384	./.	./.	0/0:35,0:33:69.24:0,69,1102	0/0:26,0:26:42.13:0,42,644	0/0:16,0:14:21.06:0,21,307	0/0:32,0:18:54.18:0,54,837	0/0:17,0:16:42.13:0,42,647	1/1:0,23:22:66.21:906,66,0	1/1:3,20:23:57.05:717,57,0	0/0:22,0:22:60.19:0,60,924	0/0:32,0:31:71.90:0,72,1117	0/0:19,0:19:51.17:0,51,799	1/1:0,21:21:51.17:713,51,0	1/1:0,30:30:63.21:880,63,0	0/0:53,0:51:69.14:0,69,1017	1/1:0,8:7:8.99:104,9,0	0/0:19,0:14:42.10:0,42,643	0/0:43,0:40:99:0,105,1613	0/0:27,0:26:45.15:0,45,719	0/0:24,0:24:60.20:0,60,958	0/0:23,0:22:42.14:0,42,671	0/0:28,0:28:57.19:0,57,911	1/1:0,21:21:33.11:461,33,0	0/0:36,0:35:99:0,105,1596	0/0:35,0:34:90.25:0,90,1397	0/0:7,0:4:11.96:0,12,137
chr10	44647994	.	T	TC	1754.16	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=8.979;DP=767;FS=26.598;HRun=1;HaplotypeScore=83.5434;InbreedingCoeff=0.8246;MQ=69.15;MQ0=12;MQRankSum=-8.028;QD=14.62;ReadPosRankSum=-2.032;VQSLOD=1.4825;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,2:38:99:0,111,1395	1/1:4,29:23:57.19:839,57,0	0/0:30,1:31:83.92:0,84,902	0/0:11,0:11:29.66:0,30,342	0/0:24,1:24:69.15:0,69,850	0/0:14,0:14:39.13:0,39,506	0/0:21,0:21:57.12:0,57,660	0/1:45,0:45:4.71:5,0,207	0/0:24,0:24:66.19:0,66,827	0/0:37,0:37:99:0,111,1427	0/0:31,0:31:93.26:0,93,1154	0/0:23,0:23:69.22:0,69,894	0/0:28,0:28:84.24:0,84,1048	0/0:23,0:23:69.20:0,69,865	0/0:25,0:25:75.22:0,75,944	0/0:22,0:22:63.20:0,63,816	1/1:2,40:32:72.09:1035,72,0	0/0:6,0:6:18.06:0,18,233	0/0:25,0:25:75.24:0,75,961	0/0:37,3:37:99:0,111,1381	0/0:26,0:26:78.25:0,78,1011	0/0:26,0:26:75.24:0,75,960	0/0:32,0:32:93.30:0,93,1205	0/0:24,0:24:72.23:0,72,933	0/0:34,0:34:99:0,99,1244	0/0:27,2:26:72.23:0,72,934	0/0:33,3:34:99:0,99,1255	0/0:13,0:13:33.11:0,33,428
chr10	44648060	.	CT	C	771.01	PASS	AB=0.758;AC=2;AF=0.036;AN=56;BaseQRankSum=8.071;DP=766;FS=4.694;HRun=2;HaplotypeScore=99.5164;InbreedingCoeff=-0.0372;MQ=59.12;MQ0=10;MQRankSum=-2.890;QD=8.29;ReadPosRankSum=0.383;VQSLOD=1.0970;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:38:99:0,114,1703	0/1:23,13:34:99:424,0,548	0/0:20,0:14:42.01:0,42,559	0/0:20,0:8:24.05:0,24,328	0/0:31,0:31:90.30:0,90,1348	0/0:16,0:16:42.06:0,42,630	0/0:32,0:32:93.31:0,93,1375	0/0:28,0:28:78.26:0,78,1169	0/0:31,0:30:87.29:0,87,1304	0/0:40,0:40:99:0,117,1754	0/0:23,0:23:69.21:0,69,996	0/0:23,0:23:69.23:0,69,1029	0/0:32,0:31:93.31:0,93,1376	0/0:25,0:25:75.23:0,75,1102	0/0:28,0:28:81.27:0,81,1214	0/0:21,0:21:63.20:0,63,926	0/1:41,16:51:99:436,0,1381	0/0:9,0:9:24.08:0,24,357	0/0:21,0:19:54.16:0,54,772	0/0:25,0:23:69.22:0,69,1012	0/0:28,0:28:81.27:0,81,1209	0/0:33,0:33:93.29:0,93,1349	0/0:19,0:19:57.17:0,57,814	0/0:20,0:20:60.20:0,60,899	0/0:25,0:25:63.21:0,63,944	0/0:36,0:34:99:0,102,1509	0/0:33,0:31:87.29:0,87,1304	0/0:13,0:13:39.13:0,39,585
chr10	44648465	.	G	GA	3431.43	PASS	AB=0.633;AC=9;AF=0.161;AN=56;BaseQRankSum=-6.738;DP=758;FS=8.398;HRun=9;HaplotypeScore=84.6736;InbreedingCoeff=0.6676;MQ=56.32;MQ0=50;MQRankSum=0.366;QD=17.60;ReadPosRankSum=1.054;VQSLOD=3.3730;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:46:99:0,114,989	0/0:17,0:26:58.38:0,58,375	0/0:13,0:13:20.05:0,20,173	0/0:17,0:16:16.66:0,17,220	0/0:30,1:28:32.78:0,33,514	0/0:25,0:25:56.97:0,57,495	0/0:24,0:25:71.01:0,71,605	0/0:27,0:27:71.98:0,72,625	0/0:21,1:22:26.73:0,27,447	1/1:11,29:36:61.92:903,62,0	1/1:5,31:31:66.10:703,66,0	0/0:17,0:17:41.98:0,42,364	0/0:12,0:12:29.99:0,30,260	0/0:18,0:17:47.97:0,48,412	0/1:20,12:28:99:157,0,394	1/1:3,34:34:41.16:910,41,0	0/0:39,0:61:99:0,123,809	0/1:8,12:20:99:311,0,128	0/0:15,0:15:38.98:0,39,339	0/0:27,0:27:74.78:0,75,629	0/0:19,0:19:44.97:0,45,391	0/0:29,0:29:59.06:0,59,519	0/0:23,0:22:56.96:0,57,492	0/0:21,1:22:23.76:0,24,428	0/1:5,25:21:0.90:447,0,1	0/0:25,1:23:22.66:0,23,401	0/0:32,0:30:76.98:0,77,653	0/0:8,0:8:14.99:0,15,130
chr10	44649278	.	G	GT	783.89	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-0.884;DP=651;FS=0.000;HRun=1;HaplotypeScore=64.1929;InbreedingCoeff=0.9676;MQ=54.14;MQ0=21;MQRankSum=-1.026;QD=19.60;ReadPosRankSum=1.160;VQSLOD=3.7335;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:30:84.13:0,84,1024	1/1:7,7:10:10.38:217,10,0	0/0:26,0:19:39.03:0,39,670	0/0:11,0:8:24.03:0,24,278	0/0:25,0:25:75.23:0,75,950	0/0:24,0:24:69.22:0,69,886	0/0:23,0:23:69.10:0,69,821	0/0:27,0:27:75.23:0,75,945	0/0:23,0:23:60.13:0,60,712	0/0:23,0:22:63.18:0,63,781	0/0:15,0:15:42.10:0,42,523	0/0:22,0:22:57.13:0,57,701	0/0:44,0:42:99:0,117,1499	0/0:23,0:23:54.13:0,54,663	0/0:29,0:29:75.04:0,75,890	0/0:23,0:22:66.15:0,66,828	1/1:9,17:23:48.12:683,48,0	0/0:6,0:6:18.06:0,18,232	0/0:34,0:29:84:0,84,992	0/0:31,0:31:90.26:0,90,1130	0/0:25,0:25:75.19:0,75,947	0/0:15,0:14:42.14:0,42,541	0/0:20,0:20:54.16:0,54,682	0/0:18,0:18:54.17:0,54,680	0/0:22,0:20:54.17:0,54,696	0/0:37,0:35:99:0,102,1277	0/0:28,0:27:75.19:0,75,927	0/0:6,0:6:18.06:0,18,232
chr10	44649989	.	TG	T	992.44	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.310;DP=553;FS=7.444;HRun=4;HaplotypeScore=96.6123;InbreedingCoeff=0.9639;MQ=57.35;MQ0=8;MQRankSum=-0.554;QD=22.05;ReadPosRankSum=-1.058;VQSLOD=2.1056;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:72.24:0,72,1008	1/1:0,11:9:21.06:251,21,0	0/0:22,0:16:9.55:0,10,519	0/0:15,0:13:35.78:0,36,448	0/0:31,0:30:60.20:0,60,837	0/0:20,0:20:57.19:0,57,797	0/0:16,0:16:42.14:0,42,588	0/0:19,0:19:54.17:0,54,740	0/0:17,0:17:51.17:0,51,713	0/0:27,0:26:78.25:0,78,1075	0/0:19,0:17:33.11:0,33,461	0/0:25,0:24:44.98:0,45,630	0/0:18,0:18:45.15:0,45,629	0/0:18,0:18:45.15:0,45,623	0/0:21,0:21:48.13:0,48,650	0/0:16,0:16:39.13:0,39,546	1/1:0,34:31:72.22:862,72,0	0/0:11,0:11:27.09:0,27,377	0/0:21,0:20:60.19:0,60,823	0/0:27,0:27:69.22:0,69,949	0/0:16,0:15:36.12:0,36,503	0/0:12,0:12:18.05:0,18,233	0/0:14,0:12:24.08:0,24,335	0/0:10,0:10:24.08:0,24,336	0/0:21,0:21:60.08:0,60,745	0/0:26,0:26:75.25:0,75,1048	0/0:29,0:28:63.21:0,63,880	0/0:8,0:8:24.08:0,24,336
chr10	44650905	.	G	GGA	1406.98	PASS	AB=0.828;AC=8;AF=0.143;AN=56;BaseQRankSum=3.210;DP=1110;FS=0.000;HRun=0;HaplotypeScore=195.8702;InbreedingCoeff=-0.1668;MQ=45.90;MQ0=49;MQRankSum=-5.050;QD=3.76;ReadPosRankSum=3.726;VQSLOD=2.4998;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:49,6:53:99:149,0,1722	0/1:12,14:15:99:256,0,242	0/0:20,0:10:24.08:0,24,360	0/0:15,0:10:27.09:0,27,390	0/0:41,8:41:50.64:0,51,1548	0/0:32,0:32:84.29:0,84,1285	0/0:28,0:28:75.25:0,75,1122	0/0:26,0:26:75.23:0,75,1105	0/0:30,0:29:78.21:0,78,1166	0/0:52,0:48:99:0,138,2084	0/0:35,0:28:84.24:0,84,1255	0/0:41,0:37:99:0,99,1514	0/0:59,0:52:99:0,123,1876	0/0:34,0:32:69.23:0,69,1044	0/0:55,0:45:99:0,102,1559	0/0:31,0:27:69.19:0,69,1028	0/1:18,10:22:99:290,0,540	0/0:39,0:37:93.32:0,93,1423	0/1:51,5:49:84.06:84,0,1885	0/0:46,2:45:59.72:0,60,1686	0/1:67,9:71:99:273,0,2269	0/0:29,0:24:72.24:0,72,1101	0/0:42,0:40:99:0,114,1693	0/0:43,0:41:99:0,108,1608	0/0:28,0:24:54.18:0,54,821	0/1:49,11:46:99:198,0,1593	0/1:49,9:52:99:211,0,1608	0/1:11,3:13:82.74:83,0,380
chr10	44650935	.	A	AT	1219.99	PASS	AB=0.820;AC=6;AF=0.107;AN=56;BaseQRankSum=8.414;DP=989;FS=0.000;HRun=4;HaplotypeScore=152.4833;InbreedingCoeff=-0.1277;MQ=47.10;MQ0=71;MQRankSum=-3.032;QD=4.47;ReadPosRankSum=3.395;VQSLOD=-0.2365;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:30,15:44:99:483,0,624	0/0:27,0:15:33.08:0,33,364	0/0:21,0:13:28.32:0,28,308	0/0:14,0:11:18.05:0,18,202	0/1:42,6:36:99:114,0,760	0/0:32,0:32:93.25:0,93,1043	0/0:25,0:25:69.20:0,69,782	0/0:27,0:26:72.20:0,72,817	0/0:25,0:25:63.16:0,63,704	0/0:55,0:53:99:0,153,1685	0/0:24,0:23:69.20:0,69,782	0/0:46,0:39:99:0,108,1224	0/0:52,0:49:99:0,126,1428	0/0:35,0:34:93.26:0,93,1053	0/0:46,0:37:99:0,99,1122	0/0:25,0:24:72.19:0,72,805	0/0:20,0:16:36.10:0,36,408	0/0:28,0:28:75.20:0,75,851	0/1:45,10:38:99:103,0,874	0/0:34,2:34:17.29:0,17,963	0/1:36,19:52:99:505,0,821	0/0:21,0:21:60.17:0,60,679	0/0:43,0:42:99:0,117,1327	0/0:35,0:34:93.25:0,93,1044	0/0:28,0:27:69.19:0,69,783	0/1:46,9:40:58.57:59,0,932	0/0:48,3:46:3.60:0,4,1204	0/1:12,3:14:80.99:81,0,331
chr10	44651276	.	G	GT	310.35	PASS	AB=0.955;AC=5;AF=0.096;AN=52;BaseQRankSum=3.339;DP=672;FS=8.588;HRun=8;HaplotypeScore=63.0881;InbreedingCoeff=0.7780;MQ=44.26;MQ0=57;MQRankSum=-0.550;QD=3.69;ReadPosRankSum=0.892;VQSLOD=-0.4328;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:20:24.01:0,24,220	1/1:14,11:15:22.56:198,23,0	./.	./.	0/0:32,0:30:27.44:0,27,342	0/0:15,0:13:27.01:0,27,247	0/0:13,0:11:21:0,21,188	0/0:41,0:35:74.99:0,75,678	0/0:18,0:16:32.99:0,33,294	0/0:32,0:30:87.03:0,87,790	0/0:31,2:30:60.02:0,60,544	0/0:21,0:21:33.02:0,33,302	0/0:16,0:16:33.02:0,33,302	0/0:24,0:23:26.99:0,27,243	0/0:19,0:19:30.02:0,30,275	0/0:19,0:19:45.02:0,45,411	1/1:22,16:27:22.20:227,22,0	0/0:13,0:11:17.96:0,18,157	0/0:31,0:20:54.01:0,54,494	0/0:41,0:37:80.69:0,81,716	0/0:14,0:14:15.01:0,15,137	0/1:20,1:20:10.61:11,0,168	0/0:40,0:34:45.02:0,45,412	0/0:14,0:14:33.02:0,33,302	0/0:29,0:27:60.01:0,60,545	0/0:18,0:17:45.02:0,45,412	0/0:30,0:29:35.97:0,36,329	0/0:18,0:17:36.01:0,36,325
chr10	44651284	.	T	TA	283.50	PASS	AC=4;AF=0.077;AN=52;BaseQRankSum=5.859;DP=678;FS=8.374;HRun=2;HaplotypeScore=60.8953;InbreedingCoeff=0.9870;MQ=44.60;MQ0=58;MQRankSum=-1.264;QD=4.36;ReadPosRankSum=0.711;VQSLOD=0.0952;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:19:30.02:0,30,339	1/1:16,9:15:26.16:264,26,0	./.	./.	0/0:33,0:29:55.67:0,56,611	0/0:18,0:16:32.94:0,33,360	0/0:14,0:12:21:0,21,239	0/0:36,0:28:78.14:0,78,909	0/0:19,0:17:36.08:0,36,399	0/0:36,0:33:90.23:0,90,1066	0/0:35,0:31:63.18:0,63,755	0/0:19,0:19:39.10:0,39,458	0/0:17,0:17:33.09:0,33,394	0/0:21,0:20:39.07:0,39,431	0/0:19,0:19:33.09:0,33,395	0/0:21,0:21:54.14:0,54,627	1/1:31,9:30:22.39:139,22,0	0/0:14,0:12:30.02:0,30,316	0/0:31,0:23:66.12:0,66,763	0/0:47,0:41:84.04:0,84,982	0/0:18,0:14:20.93:0,21,224	0/0:18,0:17:17.01:0,17,264	0/0:35,0:30:45.13:0,45,543	0/0:15,0:15:36.09:0,36,421	0/0:29,0:27:69.16:0,69,792	0/0:20,0:19:54.11:0,54,624	0/0:32,0:31:41.87:0,42,492	0/0:18,0:16:33.07:0,33,381
chr10	44653600	.	ATTCTGAATATCTTTTT	A	427.71	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=3.286;DP=601;FS=4.666;HRun=0;HaplotypeScore=289.3394;InbreedingCoeff=0.8584;MQ=64.55;MQ0=10;MQRankSum=-3.413;QD=20.37;ReadPosRankSum=-0.944;VQSLOD=1.9828;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:48.15:0,48,2586	1/1:4,6:7:6.02:262,6,0	0/0:17,0:13:39.13:0,39,2034	0/0:5,0:5:12.04:0,12,698	0/0:26,0:26:57.19:0,57,3376	0/0:24,0:24:66.23:0,66,4856	0/0:16,0:16:36.12:0,36,2540	0/0:33,0:33:60.20:0,60,3004	0/0:13,0:13:27.09:0,27,1936	0/0:40,0:39:99:0,102,5860	0/0:30,2:30:78.27:0,78,5055	0/0:14,0:14:33.10:0,33,1974	0/0:26,0:25:48.16:0,48,3114	0/0:19,0:18:42.14:0,42,2745	0/0:18,0:18:45.15:0,45,3092	0/0:16,0:16:36.12:0,36,2405	1/1:7,4:8:5.69:266,6,0	0/0:12,0:12:27.09:0,27,1544	0/0:26,0:25:60.20:0,60,3138	0/0:30,0:29:81.28:0,81,4692	0/0:15,0:15:39.13:0,39,2199	0/0:19,0:18:42.12:0,42,2128	0/0:26,0:26:63.22:0,63,4100	0/0:10,0:9:21.07:0,21,1144	0/0:35,1:35:93.31:0,93,5699	0/0:29,0:29:75.26:0,75,4941	0/0:39,0:39:96.33:0,96,6167	0/0:21,0:21:51.18:0,51,2839
chr10	44653611	.	C	CTT	12557.42	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=-2.198;DP=602;FS=4.965;HRun=7;HaplotypeScore=88.9200;InbreedingCoeff=0.9546;MQ=66.19;MQ0=9;MQRankSum=-2.121;QD=24.72;ReadPosRankSum=3.645;VQSLOD=3.9895;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,0:20:42.90:161,43,0	0/0:7,0:4:5.11:0,5,20	0/0:23,0:20:57.14:0,57,641	0/0:7,0:7:21.06:0,21,238	1/1:2,0:23:53.35:207,53,0	0/0:23,0:23:66.19:0,66,767	0/0:14,0:14:39.09:0,39,434	1/1:1,0:26:60.19:215,60,0	0/0:12,0:12:33.10:0,33,384	1/1:5,35:39:99:1666,105,0	1/1:5,28:32:90.18:1388,90,0	1/1:1,13:14:33.11:542,33,0	1/1:3,21:23:53.92:886,54,0	1/1:2,15:17:45.15:738,45,0	1/1:1,19:21:48.16:788,48,0	1/1:1,16:17:36.12:591,36,0	0/0:8,0:5:5.52:0,6,25	1/1:1,10:11:30.08:466,30,0	1/1:4,0:28:61.93:217,62,0	1/1:3,0:35:77.84:284,78,0	1/1:1,0:14:32.44:114,32,0	1/1:4,14:17:39.09:611,39,0	1/1:2,26:28:65:1051,65,0	1/1:0,11:10:27.09:443,27,0	1/1:2,31:32:90.31:1477,90,0	1/1:1,0:29:69.87:246,70,0	1/1:1,0:42:89.83:316,90,0	1/1:4,0:22:42.42:149,42,0
chr10	44653737	.	AGCCTGGAGCTCCCTATGTG	A	622.59	PASS	AB=0.763;AC=1;AF=0.018;AN=56;BaseQRankSum=3.404;DP=691;FS=3.979;HRun=0;HaplotypeScore=328.2914;InbreedingCoeff=-0.0184;MQ=65.38;MQ0=11;MQRankSum=-3.725;QD=21.47;ReadPosRankSum=0.117;VQSLOD=1.8802;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:49:99:0,132,11697	0/0:7,0:7:21.07:0,21,1891	0/0:19,0:17:48.16:0,48,3361	0/0:22,0:19:54.04:0,54,3372	0/0:34,0:32:84.21:0,84,6039	0/0:24,0:24:71.98:0,72,5420	0/0:17,0:17:51.18:0,51,3714	0/0:27,0:27:75.25:0,75,5499	0/0:15,0:15:45.14:0,45,3690	0/0:38,0:32:87.24:0,87,6517	0/0:27,0:25:69.18:0,69,4908	0/0:18,0:18:54.09:0,54,3877	0/0:25,0:24:72.21:0,72,5537	0/0:19,0:19:54.19:0,54,4480	0/0:19,0:19:57.20:0,57,4692	0/0:25,0:24:69.24:0,69,5229	0/1:20,9:28:99:697,0,4031	0/0:14,0:12:30.10:0,30,2334	0/0:17,0:15:45.14:0,45,3440	0/0:26,0:26:69.15:0,69,5046	0/0:27,0:27:78.27:0,78,7074	0/0:39,0:36:95.92:0,96,7292	0/0:32,0:31:75.23:0,75,6154	0/0:19,0:18:54.19:0,54,4281	0/0:26,0:26:75.26:0,75,6408	0/0:27,0:27:78.11:0,78,5601	0/0:37,0:32:90.31:0,90,7530	0/0:10,0:9:27.03:0,27,1760
chr10	44654253	.	ACCTCC	A	253.33	PASS	AB=0.822;AC=2;AF=0.040;AN=50;BaseQRankSum=4.983;DP=485;FS=3.491;HRun=0;HaplotypeScore=68.8541;InbreedingCoeff=-0.0590;MQ=31.32;MQ0=135;MQRankSum=-2.812;QD=6.67;ReadPosRankSum=0.881;VQSLOD=1.7085;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:9:15.05:0,15,500	0/1:10,8:13:99:300,0,269	./.	./.	0/0:27,0:22:29.63:0,30,994	0/0:11,0:5:6.02:0,6,200	0/0:17,0:8:15.05:0,15,499	0/0:31,0:15:45.15:0,45,1403	0/0:6,0:5:15.05:0,15,458	0/0:16,0:12:36.12:0,36,1151	0/0:11,0:8:9.03:0,9,299	0/0:10,0:7:8.54:0,9,299	0/0:11,0:10:21.01:0,21,683	0/0:19,0:11:24.08:0,24,797	0/0:17,0:15:15.05:0,15,474	0/0:18,0:14:26.67:0,27,897	0/1:19,1:9:41.18:41,0,94	0/0:12,0:7:18.06:0,18,599	0/0:12,0:4:12.04:0,12,342	0/0:21,0:15:35.32:0,35,1195	0/0:22,0:6:9.03:0,9,285	0/0:16,0:14:27.09:0,27,897	0/0:24,0:18:21.07:0,21,698	./.	0/0:22,0:17:18.53:0,19,538	0/0:22,0:17:51.15:0,51,1622	0/0:19,0:14:35.70:0,36,1197	0/0:12,0:9:23.95:0,24,799
chr10	44654260	.	GGAACCC	G	214.72	PASS	AB=0.821;AC=2;AF=0.037;AN=54;BaseQRankSum=4.729;DP=464;FS=1.623;HRun=0;HaplotypeScore=70.6016;InbreedingCoeff=-0.0589;MQ=34.70;MQ0=115;MQRankSum=-2.706;QD=5.80;ReadPosRankSum=0.850;VQSLOD=1.4694;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:10:18.06:0,18,645	0/1:10,8:13:99:270,0,224	0/0:18,0:3:9.03:0,9,281	0/0:26,0:5:12:0,12,281	0/0:25,0:21:30.10:0,30,965	0/0:11,0:5:6.02:0,6,226	0/0:15,0:8:15.05:0,15,564	0/0:30,0:15:45.15:0,45,1620	0/0:6,0:5:15.05:0,15,564	0/0:16,0:12:36.12:0,36,1355	0/0:9,0:6:9.03:0,9,262	0/0:11,0:7:9.03:0,9,338	0/0:12,0:11:23.92:0,24,880	0/0:18,0:11:21.07:0,21,708	0/0:15,0:13:12.04:0,12,451	0/0:16,0:13:26.82:0,27,1014	0/1:18,1:11:33.32:33,0,174	0/0:12,0:7:18.06:0,18,677	0/0:12,0:3:9.03:0,9,334	0/0:20,0:14:36.12:0,36,1210	0/0:18,0:6:9.03:0,9,338	0/0:16,0:14:27.09:0,27,955	0/0:23,0:17:21.07:0,21,672	./.	0/0:21,0:16:21.07:0,21,618	0/0:20,0:17:48.16:0,48,1675	0/0:19,0:15:38.87:0,39,1411	0/0:12,0:9:24.08:0,24,887
chr10	44654306	.	T	TTAA	246.56	PASS	AC=14;AF=0.412;AN=34;BaseQRankSum=-0.682;DP=226;FS=6.972;HRun=0;HaplotypeScore=49.4860;InbreedingCoeff=0.4745;MQ=51.80;MQ0=15;MQRankSum=-0.726;QD=3.24;ReadPosRankSum=-1.694;VQSLOD=-0.0122;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:2.67:0,3,13	./.	./.	./.	0/0:7,0:6:5.95:0,6,42	./.	1/1:4,1:5:3.01:57,3,0	1/1:33,0:26:1.25:3,1,0	1/1:5,3:8:6.02:114,6,0	1/1:7,0:6:3.01:39,3,0	1/1:5,0:4:6.02:89,6,0	0/0:4,0:2:2.88:0,3,15	0/0:5,0:5:1.82:0,2,5	0/0:8,0:7:2.98:0,3,21	./.	./.	1/1:10,0:9:4.95:38,5,0	1/1:8,0:8:3:25,3,0	0/0:5,0:5:8.93:0,9,63	./.	0/0:4,0:4:2.98:0,3,21	./.	./.	./.	./.	0/0:13,0:13:5.92:0,6,39	0/0:15,0:14:11.73:0,12,76	0/0:9,0:9:8.17:0,8,48
chr10	44654308	.	AAT	A	235.92	PASS	AB=0.805;AC=9;AF=0.180;AN=50;BaseQRankSum=3.343;DP=212;FS=9.478;HRun=0;HaplotypeScore=41.9048;InbreedingCoeff=-0.1424;MQ=49.86;MQ0=16;MQRankSum=1.424;QD=3.57;ReadPosRankSum=0.600;VQSLOD=0.2298;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:13:15.44:0,15,86	0/0:7,0:5:11.67:0,12,67	0/0:9,0:8:18.04:0,18,210	0/0:6,0:5:15.02:0,15,170	0/1:5,2:6:27.21:39,0,27	0/0:2,0:2:6.02:0,6,74	0/0:5,0:5:15.05:0,15,183	0/0:35,0:26:26.70:0,27,280	0/0:8,0:8:18.06:0,18,228	0/0:6,0:6:15.75:0,16,131	0/0:4,0:3:8.76:0,9,86	0/1:1,0:2:0.92:1,0,6	0/1:4,0:4:3.78:12,0,4	0/1:7,1:8:30.10:51,0,30	0/0:5,0:5:7.48:0,7,28	0/0:6,0:5:10.77:0,11,50	0/0:12,0:11:20.98:0,21,252	0/0:8,0:8:13.88:0,14,65	0/1:2,3:5:11.86:71,0,12	0/0:6,0:3:5.19:0,5,20	0/1:3,1:4:15.55:16,0,28	0/0:4,0:4:4.98:0,5,18	./.	./.	./.	0/1:11,2:13:21.34:21,0,78	0/1:11,2:12:34.41:96,0,34	0/1:7,2:9:48.70:57,0,49
chr10	44654312	.	AT	A	63.39	PASS	AB=0.972;AC=5;AF=0.100;AN=50;BaseQRankSum=4.400;DP=193;FS=5.600;HRun=1;HaplotypeScore=36.4224;InbreedingCoeff=0.1913;MQ=51.93;MQ0=10;MQRankSum=-2.812;QD=2.88;ReadPosRankSum=1.090;VQSLOD=-0.4475;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:10,2:12:16.29:0,16,291	1/1:0,4:4:9.03:125,9,0	0/0:5,0:5:15.04:0,15,189	0/0:3,0:2:6.02:0,6,72	0/0:7,0:7:15.67:0,16,180	0/0:2,0:2:6.02:0,6,84	0/0:4,0:4:8.96:0,9,73	0/0:37,0:27:81.23:0,81,1095	0/0:6,0:6:15.04:0,15,188	0/0:6,0:6:18.05:0,18,247	0/0:3,0:3:9.03:0,9,134	0/1:3,0:2:18.39:18,0,36	0/1:2,0:2:6.03:6,0,37	0/0:7,0:7:16.69:0,17,166	0/0:3,0:3:9.03:0,9,127	0/0:5,0:5:12.03:0,12,152	0/1:10,1:11:23.10:23,0,210	0/0:9,0:9:24.80:0,25,308	0/0:6,0:5:11.46:0,11,85	0/0:4,0:4:6.02:0,6,85	0/0:5,0:5:13.86:0,14,171	0/0:2,0:2:6.02:0,6,82	./.	./.	./.	0/0:12,0:12:33.73:0,34,430	0/0:13,0:13:26.45:0,26,282	0/0:11,0:11:26.74:0,27,308
chr10	44654655	.	A	AGG	1250.99	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-0.757;DP=447;FS=8.632;HRun=6;HaplotypeScore=77.2066;InbreedingCoeff=0.9626;MQ=57.90;MQ0=14;MQRankSum=-5.412;QD=35.74;ReadPosRankSum=1.266;VQSLOD=2.8350;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:42.08:0,42,483	1/1:3,4:6:15.05:240,15,0	0/0:24,0:8:18.05:0,18,213	0/0:19,0:8:17.99:0,18,201	0/0:17,0:17:45.14:0,45,548	0/0:17,0:17:42.13:0,42,512	0/0:14,0:14:29.60:0,30,365	0/0:31,0:30:66.19:0,66,795	0/0:21,0:21:51.15:0,51,622	0/0:14,0:14:42.13:0,42,512	0/0:8,0:8:21.02:0,21,239	0/0:11,0:11:30.09:0,30,364	0/0:16,0:16:39.12:0,39,476	0/0:21,0:21:45.13:0,45,549	0/0:14,0:14:39.11:0,39,464	0/0:16,0:16:45.14:0,45,549	1/1:12,16:28:72.24:1130,72,0	0/0:11,0:11:27.08:0,27,329	0/0:11,0:9:24.07:0,24,292	0/0:6,0:6:15.04:0,15,183	0/0:14,0:14:42.12:0,42,500	0/0:9,0:9:27.08:0,27,329	0/0:6,0:6:15.04:0,15,182	0/0:15,0:15:39.12:0,39,475	0/0:12,0:12:33.06:0,33,386	0/0:23,0:23:57.16:0,57,695	0/0:34,0:33:87.25:0,87,1049	0/0:13,0:12:33.10:0,33,403
chr10	44654656	.	G	GGA	1033.75	PASS	AB=0.889;AC=3;AF=0.054;AN=56;BaseQRankSum=5.938;DP=449;FS=9.267;HRun=0;HaplotypeScore=80.5575;InbreedingCoeff=0.7260;MQ=57.68;MQ0=14;MQRankSum=-6.357;QD=27.94;ReadPosRankSum=2.172;VQSLOD=4.7635;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:45.14:0,45,649	0/1:7,1:7:5.76:207,0,6	0/0:26,0:10:23.89:0,24,305	0/0:19,0:8:23.40:0,23,287	0/0:18,0:18:47.91:0,48,710	0/0:16,0:16:42.14:0,42,643	0/0:14,0:14:39.09:0,39,519	0/0:30,0:29:81.24:0,81,1147	0/0:21,0:21:60.17:0,60,857	0/0:14,0:14:42.14:0,42,641	0/0:8,0:8:24.06:0,24,336	0/0:11,0:11:33.10:0,33,479	0/0:15,0:15:42.13:0,42,623	0/0:21,0:21:51.15:0,51,739	0/0:14,0:14:42.10:0,42,609	0/0:16,0:16:48.15:0,48,714	1/1:24,5:29:81.07:933,81,0	0/0:12,0:12:27.09:0,27,413	0/0:11,0:9:27.08:0,27,392	0/0:6,0:6:18.05:0,18,252	0/0:14,0:14:42.14:0,42,642	0/0:9,0:9:27.09:0,27,413	0/0:6,0:6:18.05:0,18,255	0/0:14,0:14:42.13:0,42,623	0/0:11,0:11:33.11:0,33,497	0/0:23,0:23:66.20:0,66,953	0/0:34,0:33:96.27:0,96,1403	0/0:13,0:12:36.10:0,36,527
chr10	44654675	.	TA	T	9679.49	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=7.024;DP=409;FS=7.624;HRun=6;HaplotypeScore=46.2676;InbreedingCoeff=0.9641;MQ=59.15;MQ0=6;MQRankSum=2.144;QD=28.72;ReadPosRankSum=1.559;VQSLOD=5.1866;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,13:14:39.10:419,39,0	1/1:1,6:7:21.05:225,21,0	0/0:15,0:13:5.48:0,5,386	0/0:11,0:9:26.95:0,27,330	1/1:1,19:19:54.14:580,54,0	0/0:16,0:16:39.13:0,39,513	0/0:11,0:11:27.09:0,27,355	1/1:0,26:25:75.15:788,75,0	0/0:19,0:19:54.18:0,54,711	1/1:0,17:17:51.12:543,51,0	1/1:0,8:8:21.05:226,21,0	1/1:1,11:12:33.08:355,33,0	1/1:1,13:14:36.09:387,36,0	1/1:0,17:17:45.11:483,45,0	1/1:1,13:14:39.10:419,39,0	1/1:1,13:14:39.10:419,39,0	1/1:4,22:26:60.14:644,60,0	1/1:0,12:12:30.08:322,30,0	1/1:3,8:9:21.05:226,21,0	1/1:0,7:7:18.04:193,18,0	1/1:0,12:12:36.09:387,36,0	1/1:0,11:11:30.07:322,30,0	1/1:0,8:8:21.05:226,21,0	1/1:1,6:7:18.05:193,18,0	1/1:0,13:13:39.10:419,39,0	1/1:1,21:22:63.16:677,63,0	1/1:3,29:32:84.21:903,84,0	1/1:0,12:11:30.08:322,30,0
chr10	44654810	.	AG	A	639.64	PASS	AB=0.627;AC=2;AF=0.038;AN=52;BaseQRankSum=3.825;DP=477;FS=1.961;HRun=2;HaplotypeScore=47.5103;InbreedingCoeff=-0.0494;MQ=49.57;MQ0=60;MQRankSum=1.820;QD=16.83;ReadPosRankSum=0.875;VQSLOD=3.6377;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:19:51.17:0,51,762	0/1:3,8:10:59.85:281,0,60	./.	./.	0/0:27,0:23:57.19:0,57,854	0/0:19,0:17:39.13:0,39,578	0/0:3,0:3:3.01:0,3,45	0/0:27,0:23:66.22:0,66,971	0/0:6,0:6:12.04:0,12,180	0/0:20,0:20:60.19:0,60,872	0/0:27,0:25:57.19:0,57,854	0/0:7,0:7:17.85:0,18,268	0/0:13,0:13:32.90:0,33,494	0/0:7,0:7:15.05:0,15,225	0/0:11,0:10:27.09:0,27,405	0/0:20,0:19:48.16:0,48,719	0/1:14,13:22:99:446,0,231	0/0:19,0:18:51.16:0,51,744	0/0:20,0:12:36.11:0,36,520	0/0:33,0:32:96.32:0,96,1432	0/0:15,0:13:33.11:0,33,494	0/0:15,0:14:39.13:0,39,583	0/0:13,0:13:27.09:0,27,404	0/0:10,0:10:27.09:0,27,405	0/0:21,0:20:57.19:0,57,853	0/0:25,0:23:69.23:0,69,1016	0/0:17,0:16:45.13:0,45,646	0/0:14,0:11:33.11:0,33,495
chr10	44655187	.	T	TA	4209.74	PASS	AB=0.729;AC=18;AF=0.321;AN=56;BaseQRankSum=-6.633;DP=668;FS=1.061;HRun=10;HaplotypeScore=73.3372;InbreedingCoeff=0.2222;MQ=59.16;MQ0=23;MQRankSum=1.775;QD=11.41;ReadPosRankSum=2.469;VQSLOD=3.2515;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:22,2:28:49.68:50,0,372	0/1:3,5:17:8.90:152,0,9	0/0:16,0:10:26.52:0,27,203	0/0:13,0:9:23.80:0,24,182	0/0:22,0:22:47.94:0,48,394	0/0:30,0:30:80.90:0,81,665	0/0:15,1:17:5.94:0,6,238	0/0:30,0:30:80.48:0,80,664	0/0:24,0:24:56.91:0,57,466	0/1:5,17:23:13.76:466,0,14	1/1:4,25:28:72.18:766,72,0	0/0:17,0:17:47.93:0,48,394	0/0:16,0:16:47.94:0,48,394	0/0:13,0:13:38.95:0,39,320	1/1:0,20:20:54.14:576,54,0	1/1:3,18:21:48.12:512,48,0	0/1:4,20:45:5.93:572,0,6	0/1:12,14:25:31.83:310,0,32	0/1:18,0:23:24.17:24,0,290	0/0:33,0:39:21.33:0,21,653	0/1:12,0:16:17.90:18,0,226	0/0:23,0:23:62.91:0,63,517	0/0:17,1:18:9.90:0,10,279	0/0:18,0:18:35.91:0,36,293	1/1:5,23:27:47.49:696,47,0	0/1:34,0:38:3.16:3,0,524	0/1:17,1:25:49.85:50,0,308	0/1:6,0:10:16.17:16,0,121
chr10	44655834	.	G	GA	698.15	PASS	AB=0.721;AC=2;AF=0.036;AN=56;BaseQRankSum=5.897;DP=723;FS=5.354;HRun=1;HaplotypeScore=104.7347;InbreedingCoeff=-0.0373;MQ=76.81;MQ0=1;MQRankSum=-5.031;QD=9.83;ReadPosRankSum=0.472;VQSLOD=1.3732;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:75.24:0,75,971	0/1:13,9:21:99:302,0,371	0/0:27,0:26:69.07:0,69,847	0/0:28,0:28:73:0,73,972	0/0:32,0:32:96.29:0,96,1208	0/0:29,0:29:81.26:0,81,1049	0/0:16,0:16:48.13:0,48,606	0/0:33,0:33:90.29:0,90,1167	0/0:20,0:20:60.13:0,60,732	0/0:24,0:23:66.21:0,66,856	0/0:22,0:22:63.20:0,63,816	0/0:31,0:31:90.24:0,90,1133	0/0:38,0:38:99:0,111,1425	0/0:23,0:23:69.21:0,69,879	0/0:31,0:31:90.28:0,90,1155	0/0:34,0:34:99:0,102,1310	0/1:31,18:46:99:485,0,876	0/0:17,0:16:45.12:0,45,567	0/0:24,0:24:63.12:0,63,793	0/0:31,0:31:93.27:0,93,1168	0/0:34,0:34:99:0,102,1322	0/0:27,0:27:75.24:0,75,943	0/0:17,0:17:51.15:0,51,645	0/0:19,0:19:54.16:0,54,677	0/0:17,0:17:48.16:0,48,623	0/0:26,0:24:71.96:0,72,893	0/0:20,0:20:51.16:0,51,653	0/0:6,0:6:18.02:0,18,214
chr10	44656033	.	TA	T	4367.35	PASS	AB=0.687;AC=9;AF=0.167;AN=54;BaseQRankSum=-3.114;DP=821;FS=5.551;HRun=2;HaplotypeScore=183.8036;InbreedingCoeff=-0.2046;MQ=53.06;MQ0=11;MQRankSum=5.689;QD=15.16;ReadPosRankSum=8.869;VQSLOD=4.3878;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:33,1:32:60.07:0,60,818	0/0:22,0:20:48.15:0,48,699	0/0:33,0:26:66.22:0,66,957	0/0:32,0:29:69.22:0,69,959	0/0:32,1:31:29.80:0,30,865	0/0:33,0:33:90.29:0,90,1321	0/0:30,0:30:84.24:0,84,1210	0/0:29,0:29:87.26:0,87,1260	0/0:35,0:35:75.31:0,75,1288	0/1:17,20:29:99:512,0,332	0/1:10,22:30:99:667,0,152	0/0:24,0:23:54.04:0,54,709	0/1:25,5:29:86.34:86,0,690	0/0:22,1:23:3.24:0,3,514	0/1:7,32:36:99:954,0,128	0/1:12,31:39:99:919,0,131	0/0:40,0:39:99:0,102,1488	0/1:5,16:20:41.78:477,0,42	0/0:18,0:16:41.95:0,42,549	0/0:38,1:39:57.31:0,57,1278	0/0:26,1:26:51.12:0,51,719	0/0:40,2:41:84.09:0,84,1128	0/0:22,1:22:54.02:0,54,703	0/1:16,3:18:74.62:75,0,396	0/1:9,24:30:99:670,0,110	0/1:32,2:31:7.44:7,0,1159	0/0:15,0:13:30.06:0,30,424	./.
chr10	44656063	.	G	GGATAGGTGTGAGA	18735.72	PASS	AB=0.712;AC=16;AF=0.286;AN=56;BaseQRankSum=-1.408;DP=769;FS=208.134;HRun=0;HaplotypeScore=255.4611;InbreedingCoeff=-0.0766;MQ=41.36;MQ0=45;MQRankSum=-12.081;QD=58.19;ReadPosRankSum=2.572;VQSLOD=1.1799;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:14,2:24:99:749,0,464	0/0:23,0:21:37.25:0,37,2124	0/0:34,0:7:9.50:0,10,321	0/0:31,0:12:27.09:0,27,770	0/1:10,6:19:99:1155,0,221	0/0:30,0:30:75.26:0,75,2702	0/0:28,0:28:75.25:0,75,2559	0/0:36,0:35:99:0,102,3394	0/0:33,0:33:93.32:0,93,3386	0/0:37,0:29:69.11:0,69,2417	0/0:23,0:20:48.16:0,48,1893	0/1:13,3:20:99:962,0,461	0/1:19,10:32:99:2135,0,744	0/1:9,6:18:99:582,0,350	0/0:40,0:36:99:0,99,3754	0/0:42,0:37:84.27:0,84,3161	0/0:36,0:35:93.32:0,93,3634	0/0:17,0:16:39.13:0,39,1337	0/1:12,2:10:99:864,0,341	0/1:14,11:33:99:3279,0,188	0/1:22,2:28:99:1060,0,923	0/1:19,5:31:99:1714,0,332	1/1:8,3:14:12.04:694,12,0	0/1:14,1:13:99:1105,0,576	0/0:35,0:33:78.27:0,78,3117	0/1:16,5:26:99:2377,0,307	0/1:9,5:16:99:1461,0,216	1/1:0,3:3:9.03:601,9,0
chr10	44657128	.	C	CT	249.08	PASS	AB=0.768;AC=1;AF=0.018;AN=56;BaseQRankSum=5.657;DP=681;FS=2.513;HRun=2;HaplotypeScore=97.6337;InbreedingCoeff=-0.0212;MQ=63.89;MQ0=6;MQRankSum=-1.578;QD=5.79;ReadPosRankSum=0.285;VQSLOD=0.6719;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,114,1413	0/0:13,4:14:7.07:0,7,414	0/0:27,0:27:69.19:0,69,827	0/0:20,0:20:36.52:0,37,593	0/0:28,0:28:84.26:0,84,1041	0/0:21,0:21:60.17:0,60,730	0/0:16,0:16:45.10:0,45,529	0/0:28,0:28:81.24:0,81,993	0/0:23,0:23:66.21:0,66,818	0/0:18,0:17:48.15:0,48,590	0/0:28,1:28:81.25:0,81,1004	0/0:18,0:18:54.17:0,54,669	0/0:24,0:24:72.17:0,72,861	0/0:16,0:16:48.15:0,48,595	0/0:27,0:26:69.22:0,69,854	0/0:21,0:20:57.17:0,57,694	0/1:30,13:41:99:324,0,859	0/0:14,0:14:39.12:0,39,483	0/0:21,0:21:60.19:0,60,743	0/0:26,0:26:78.22:0,78,939	0/0:32,0:32:96.29:0,96,1177	0/0:25,0:25:72.23:0,72,892	0/0:34,0:34:99:0,99,1209	0/0:22,0:22:60.12:0,60,701	0/0:19,0:19:51.16:0,51,632	0/0:22,0:21:60.19:0,60,743	0/0:29,3:30:69.20:0,69,841	0/0:14,0:14:42.13:0,42,521
chr10	44657209	.	C	CG	7413	PASS	AB=0.600;AC=15;AF=0.268;AN=56;BaseQRankSum=3.494;DP=667;FS=1.520;HRun=1;HaplotypeScore=115.0020;InbreedingCoeff=0.9068;MQ=54.86;MQ0=23;MQRankSum=-1.059;QD=37.63;ReadPosRankSum=3.389;VQSLOD=4.7535;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,37:39:99:1642,105,0	0/0:19,0:19:54.14:0,54,731	0/0:16,0:13:33.11:0,33,448	0/0:24,0:19:50.71:0,51,640	1/1:2,22:24:57.19:908,57,0	0/0:22,0:22:66.18:0,66,901	0/0:26,0:26:75.19:0,75,994	0/0:37,0:36:99:0,108,1474	0/0:24,0:24:72.23:0,72,987	0/0:28,0:20:60.20:0,60,838	0/0:29,0:27:66.20:0,66,889	0/0:20,0:19:39.08:0,39,523	0/0:17,0:17:42.13:0,42,562	0/0:15,0:15:30.07:0,30,399	0/0:20,0:18:48.12:0,48,649	0/0:18,0:16:27.09:0,27,377	0/0:41,0:36:81.27:0,81,1132	0/0:10,0:9:18.06:0,18,252	0/1:9,18:27:99:699,0,282	1/1:4,34:36:87.28:1384,87,0	1/1:0,10:10:30.10:479,30,0	0/0:31,0:29:66.19:0,66,888	0/0:31,0:28:65.88:0,66,907	0/0:21,0:21:42.10:0,42,565	0/0:21,0:20:60.18:0,60,820	1/1:2,21:23:24.26:962,24,0	1/1:1,22:22:45.15:718,45,0	1/1:0,13:13:39.13:623,39,0
chr10	44658531	.	TC	T	468.55	PASS	AB=0.865;AC=12;AF=0.222;AN=54;BaseQRankSum=7.278;DP=1016;FS=4.460;HRun=4;HaplotypeScore=123.8852;InbreedingCoeff=-0.2924;MQ=31.73;MQ0=301;MQRankSum=-9.074;QD=0.98;ReadPosRankSum=6.365;VQSLOD=-0.2658;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:44,4:39:8.31:8,0,1122	0/0:15,0:11:33.08:0,33,415	./.	0/0:41,0:5:8.96:0,9,82	0/1:44,10:34:41.96:42,0,823	0/0:29,0:19:51.17:0,51,706	0/0:26,0:13:27.09:0,27,377	0/0:45,0:13:38.98:0,39,403	0/0:34,0:22:53.99:0,54,664	0/1:31,11:26:35.44:35,0,788	0/0:32,6:24:57.01:0,57,705	0/0:19,2:14:33.04:0,33,428	0/1:29,7:27:68.12:68,0,774	0/1:26,4:17:41.62:42,0,280	0/1:42,4:40:5.31:5,0,1168	0/1:43,8:40:70.81:71,0,1152	0/0:52,0:46:99:0,114,1369	0/0:22,2:21:50.93:0,51,600	0/0:22,6:12:0.19:0,0,399	0/0:57,7:43:51.61:0,52,1453	0/1:35,5:35:86.28:86,0,940	0/0:25,2:19:48.04:0,48,614	0/1:21,3:11:17.63:18,0,168	0/1:15,9:19:99:173,0,271	0/1:21,3:20:52.89:53,0,529	0/1:55,5:44:11.15:11,0,1467	0/0:43,4:36:63.30:0,63,1217	0/0:20,1:17:12.16:0,12,556
chr10	44659277	.	GCAAGTCTTT	G	6034.12	PASS	AB=0.641;AC=9;AF=0.173;AN=52;BaseQRankSum=11.514;DP=703;FS=1.026;HRun=0;HaplotypeScore=135.5040;InbreedingCoeff=0.4974;MQ=30.52;MQ0=141;MQRankSum=-4.482;QD=39.44;ReadPosRankSum=2.597;VQSLOD=4.7716;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:9:15.05:0,15,724	0/0:19,0:17:45.15:0,45,2130	./.	./.	0/0:42,0:39:48.16:0,48,2095	0/0:35,0:32:60.21:0,60,2616	0/0:13,0:11:30.10:0,30,1186	0/0:30,0:26:78.27:0,78,3593	0/0:17,0:17:23.77:0,24,1163	0/1:15,17:29:99:1201,0,542	0/1:17,20:32:99:1471,0,137	0/0:16,0:16:30.10:0,30,1454	0/0:22,0:16:21.54:0,22,858	0/0:20,0:17:20.93:0,21,873	1/1:6,22:24:51.18:1522,51,0	1/1:7,14:14:18.06:551,18,0	0/0:26,0:11:9.03:0,9,376	1/1:5,2:2:3.01:92,3,0	0/0:21,0:18:54.19:0,54,2373	0/0:46,0:33:81.28:0,81,3829	0/0:27,0:16:18.06:0,18,832	0/0:32,0:31:48.16:0,48,2062	0/0:23,0:22:23.98:0,24,1081	0/0:7,0:4:6.02:0,6,230	0/1:11,17:22:99:1198,0,242	0/0:26,0:23:69.24:0,69,3320	0/0:42,0:30:50.89:0,51,2357	0/0:20,0:15:15.05:0,15,680
chr10	44659388	.	AT	A	1390.65	PASS	AB=0.839;AC=15;AF=0.268;AN=56;BaseQRankSum=8.336;DP=553;FS=3.572;HRun=2;HaplotypeScore=86.6176;InbreedingCoeff=0.6954;MQ=59.10;MQ0=24;MQRankSum=-5.738;QD=9.59;ReadPosRankSum=2.137;VQSLOD=1.7062;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:15:39.09:0,39,559	0/1:14,7:17:65.57:66,0,554	0/0:23,0:22:66.18:0,66,942	0/0:13,0:12:36.08:0,36,506	0/0:33,0:32:81.19:0,81,1159	0/0:20,0:20:60.16:0,60,874	0/0:11,0:11:33.11:0,33,486	0/0:37,0:37:99:0,111,1659	0/0:18,0:18:54.10:0,54,755	1/1:0,11:6:15.05:195,15,0	1/1:0,24:16:36.12:461,36,0	0/0:18,0:17:42.14:0,42,629	0/0:29,0:29:84.25:0,84,1227	0/0:16,0:16:45.15:0,45,670	1/1:4,12:12:24.08:310,24,0	1/1:5,6:7:12.04:150,12,0	0/1:16,7:19:68.52:69,0,524	1/1:0,4:4:6.02:78,6,0	0/0:28,0:26:34.67:0,35,971	0/0:24,0:24:63.17:0,63,919	0/0:17,0:17:48.13:0,48,679	0/0:28,0:28:69.23:0,69,1023	0/0:29,0:28:72.24:0,72,1078	0/0:12,0:12:32.94:0,33,463	1/1:1,11:7:18.06:233,18,0	0/1:23,0:20:18.15:18,0,708	0/0:27,0:27:66.21:0,66,967	0/0:9,0:9:24.08:0,24,359
chr10	44659469	.	T	TTTA	14581.08	PASS	AB=0.581;AC=25;AF=0.446;AN=56;BaseQRankSum=-13.500;DP=642;FS=6.860;HRun=0;HaplotypeScore=93.8215;InbreedingCoeff=0.7826;MQ=52.86;MQ0=17;MQRankSum=4.456;QD=45.57;ReadPosRankSum=1.871;VQSLOD=6.9005;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:4,6:10:21.73:316,0,22	0/0:28,0:26:72.24:0,72,1142	0/0:28,0:19:42.14:0,42,652	0/0:13,0:10:27.09:0,27,410	1/1:8,45:51:23.04:2367,23,0	0/0:23,0:23:57.18:0,57,907	0/0:19,0:19:48.16:0,48,773	0/0:30,0:30:72.25:0,72,1176	0/0:24,0:24:63.21:0,63,1018	0/0:28,0:25:66.22:0,66,1045	0/0:16,0:15:36.04:0,36,542	1/1:1,14:12:30.10:669,30,0	1/1:1,18:20:45.15:1004,45,0	1/1:2,13:11:30.10:670,30,0	0/0:19,0:18:51.15:0,51,781	0/0:16,0:15:33.11:0,33,526	0/0:46,0:42:99:0,102,1610	0/0:14,0:14:33.09:0,33,512	1/1:2,14:16:42.11:793,42,0	1/1:7,24:28:29.85:1385,30,0	1/1:0,13:14:39.13:871,39,0	1/1:2,21:23:51.17:1109,51,0	1/1:3,23:25:57.19:1272,57,0	1/1:2,8:9:24.08:506,24,0	0/0:18,0:18:48.16:0,48,783	0/1:4,18:21:33.33:1159,0,33	0/1:12,35:43:45.24:1714,0,45	1/1:2,10:14:36.12:746,36,0
chr10	44659571	.	GT	G	455.02	PASS	AB=0.715;AC=2;AF=0.036;AN=56;BaseQRankSum=7.428;DP=685;FS=5.068;HRun=5;HaplotypeScore=88.0297;InbreedingCoeff=-0.0381;MQ=64.10;MQ0=4;MQRankSum=-0.463;QD=7.34;ReadPosRankSum=0.257;VQSLOD=-0.0397;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:12.60:0,13,537	0/1:15,9:24:99:201,0,508	0/0:29,0:25:69.04:0,69,845	0/0:28,0:25:59.32:0,59,845	0/0:30,0:29:75.25:0,75,1024	0/0:22,0:22:60.12:0,60,782	0/0:16,0:16:48.11:0,48,620	0/0:32,0:32:93.26:0,93,1187	0/0:23,0:23:69.22:0,69,925	0/0:25,0:23:63.20:0,63,846	0/0:40,0:38:99:0,108,1408	0/0:20,0:20:54.17:0,54,722	0/0:17,0:17:48.16:0,48,656	0/0:19,0:19:54.10:0,54,682	0/0:26,0:22:54.17:0,54,722	0/0:18,0:17:48.14:0,48,617	0/1:22,16:36:99:343,0,586	0/0:22,0:22:35.33:0,35,656	0/0:10,0:10:30.10:0,30,410	0/0:41,0:39:99:0,117,1535	0/0:14,0:14:42.13:0,42,558	0/0:27,0:27:75.25:0,75,1019	0/0:34,0:34:90.30:0,90,1221	0/0:14,0:14:42.12:0,42,556	0/0:24,0:24:63.21:0,63,857	0/0:28,0:28:75.24:0,75,1005	0/0:31,0:31:87.27:0,87,1171	0/0:13,0:12:33.11:0,33,448
chr10	44659995	.	TA	T	5074.57	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=3.390;DP=681;FS=3.221;HRun=1;HaplotypeScore=69.3154;InbreedingCoeff=0.9672;MQ=58.00;MQ0=31;MQRankSum=0.706;QD=36.25;ReadPosRankSum=1.556;VQSLOD=5.2402;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:22:60.12:0,60,925	0/0:18,0:18:51.16:0,51,767	0/0:30,0:3:9.01:0,9,102	0/0:29,0:2:6.01:0,6,72	0/0:27,0:27:81.20:0,81,1178	0/0:25,0:25:72.25:0,72,1148	0/0:18,0:17:42.13:0,42,642	0/0:28,0:28:84.28:0,84,1323	0/0:25,0:25:72.25:0,72,1150	1/1:2,27:27:81.22:1095,81,0	1/1:1,20:19:54.18:755,54,0	0/0:34,0:34:99:0,99,1510	0/0:30,0:30:87.25:0,87,1318	0/0:22,0:22:66.23:0,66,1050	1/1:0,28:28:75.25:1048,75,0	1/1:1,21:21:51.17:713,51,0	0/0:26,0:22:60.20:0,60,933	1/1:0,14:14:39.13:545,39,0	0/0:11,0:9:27.07:0,27,387	0/0:35,0:35:99:0,105,1585	0/0:14,0:14:39.12:0,39,599	0/0:25,0:25:69.19:0,69,1033	0/0:27,0:26:75.21:0,75,1129	0/0:17,0:17:51.15:0,51,788	1/1:1,25:25:66.22:919,66,0	0/0:19,0:19:57.19:0,57,890	0/0:42,0:41:99:0,126,1973	0/0:15,0:11:33.11:0,33,527
chr10	44660315	.	G	GT	422.89	PASS	AB=0.820;AC=3;AF=0.054;AN=56;BaseQRankSum=6.768;DP=669;FS=3.342;HRun=0;HaplotypeScore=72.2227;InbreedingCoeff=-0.0500;MQ=62.49;MQ0=26;MQRankSum=-3.872;QD=7.17;ReadPosRankSum=1.291;VQSLOD=3.4918;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:80.85:0,81,1183	0/1:9,5:9:61.60:62,0,228	0/0:22,0:18:48.11:0,48,625	0/1:11,0:10:1.36:1,0,260	0/0:33,16:32:96.29:0,96,1314	0/0:27,0:27:78.25:0,78,1076	0/0:15,0:15:45.14:0,45,613	0/0:31,0:31:93.30:0,93,1284	0/0:26,0:26:78.26:0,78,1091	0/0:28,4:28:81.27:0,81,1129	0/0:21,5:21:60.20:0,60,839	0/0:21,0:21:63.20:0,63,866	0/0:31,0:31:93.31:0,93,1300	0/0:18,0:18:54.17:0,54,739	0/0:26,0:26:78.26:0,78,1091	0/0:22,0:22:66.20:0,66,905	0/1:21,13:33:99:450,0,722	0/0:7,0:6:15.02:0,15,190	0/0:22,0:22:63.21:0,63,881	0/0:35,3:34:99:0,99,1366	0/0:13,0:13:39.13:0,39,545	0/0:30,0:29:87.29:0,87,1201	0/0:25,0:25:75.23:0,75,1030	0/0:13,0:13:36.12:0,36,504	0/0:23,2:22:66.22:0,66,923	0/0:30,2:30:87.29:0,87,1213	0/0:23,1:23:69.23:0,69,965	0/0:4,0:4:12.04:0,12,168
chr10	44660499	.	A	AT	520.17	PASS	AB=0.703;AC=2;AF=0.036;AN=56;BaseQRankSum=2.962;DP=785;FS=1.938;HRun=3;HaplotypeScore=99.6503;InbreedingCoeff=-0.0371;MQ=61.02;MQ0=43;MQRankSum=0.152;QD=9.13;ReadPosRankSum=1.361;VQSLOD=1.2585;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:49:99:0,126,1459	0/1:14,11:20:99:204,0,312	0/0:26,0:21:48.01:0,48,553	0/0:25,0:19:48.12:0,48,545	0/0:29,0:28:72.20:0,72,851	0/0:25,0:23:66.19:0,66,780	0/0:25,0:24:66.17:0,66,767	0/0:20,0:19:42.11:0,42,485	0/0:35,0:34:99:0,102,1223	0/0:34,0:27:75.23:0,75,900	0/0:11,0:11:27.08:0,27,324	0/0:27,0:26:75.23:0,75,899	0/0:29,0:29:81.22:0,81,949	0/0:30,0:30:78.23:0,78,924	0/0:40,0:31:87.27:0,87,1041	0/0:33,0:23:57.17:0,57,683	0/1:19,13:32:99:405,0,426	0/0:20,0:18:42.13:0,42,504	0/0:26,0:22:57.12:0,57,658	0/0:22,0:22:66.20:0,66,792	0/0:55,0:53:99:0,153,1835	0/0:24,0:24:63.19:0,63,755	0/0:22,0:22:54.16:0,54,648	0/0:11,0:11:30.05:0,30,333	0/0:35,0:33:87.27:0,87,1043	0/0:25,0:23:66.20:0,66,792	0/0:35,0:27:81.25:0,81,969	0/0:9,0:9:27.08:0,27,323
chr10	44660513	.	GC	G	736.87	PASS	AB=0.688;AC=2;AF=0.036;AN=56;BaseQRankSum=1.559;DP=796;FS=4.008;HRun=1;HaplotypeScore=96.7892;InbreedingCoeff=-0.0371;MQ=60.04;MQ0=46;MQRankSum=3.193;QD=12.08;ReadPosRankSum=2.070;VQSLOD=2.3691;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:51:99:0,147,2339	0/1:15,11:21:99:359,0,306	0/0:27,0:26:78.07:0,78,1064	0/0:25,0:23:69.18:0,69,996	0/0:30,0:28:84.27:0,84,1318	0/0:23,0:21:63.17:0,63,935	0/0:24,0:23:69.22:0,69,1079	0/0:20,0:19:54.18:0,54,862	0/0:33,0:32:96.30:0,96,1486	0/0:33,0:27:81.28:0,81,1292	0/0:11,0:11:30.10:0,30,466	0/0:25,0:24:72.25:0,72,1145	0/0:24,0:24:72.23:0,72,1125	0/0:32,0:32:96.30:0,96,1483	0/0:38,0:29:81.28:0,81,1282	0/0:30,0:23:60.15:0,60,930	0/1:18,17:34:99:467,0,544	0/0:19,0:18:51.17:0,51,814	0/0:28,0:23:69.02:0,69,1066	0/0:22,0:21:60.20:0,60,955	0/0:62,0:59:99:0,175,2692	0/0:24,0:24:69.24:0,69,1101	0/0:22,0:22:60.18:0,60,912	0/0:15,0:15:42.14:0,42,669	0/0:37,0:35:99:0,102,1592	0/0:28,0:25:72.24:0,72,1119	0/0:37,0:29:87.25:0,87,1334	0/0:10,0:10:30.10:0,30,467
chr10	44660701	.	T	TA	2581.71	PASS	AB=1.000;AC=44;AF=0.917;AN=48;BaseQRankSum=2.650;DP=435;FS=3.385;HRun=0;HaplotypeScore=193.9370;InbreedingCoeff=0.3251;MQ=34.37;MQ0=50;MQRankSum=-4.045;QD=6.37;ReadPosRankSum=2.195;VQSLOD=3.6858;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:17:37.81:129,38,0	1/1:3,11:11:27.09:357,27,0	0/0:10,0:3:7.58:0,8,38	0/1:5,0:2:7.69:8,0,17	1/1:31,0:27:25.84:171,26,0	1/1:18,0:12:2.96:35,3,0	1/1:16,0:9:19.34:61,19,0	1/1:12,0:10:17.78:46,18,0	1/1:20,0:16:0.55:37,1,0	1/1:13,0:2:3.01:32,3,0	./.	1/1:19,0:16:36.64:129,37,0	1/1:21,0:20:24.79:126,25,0	1/1:26,0:24:51.39:195,51,0	1/1:9,0:1:1.55:4,2,0	./.	1/1:2,10:10:29.96:378,30,0	./.	0/1:19,0:13:0.11:35,0,0	1/1:25,0:23:50.64:178,51,0	1/1:9,0:6:9.73:34,10,0	1/1:21,0:18:36.70:130,37,0	1/1:23,0:22:53.03:194,53,0	1/1:11,0:10:3.48:21,3,0	./.	1/1:29,0:22:46.40:169,46,0	1/1:29,0:25:54.43:184,54,0	1/1:6,0:6:12.12:35,12,0
chr10	44660702	.	G	GT	13229.67	PASS	AC=46;AF=0.958;AN=48;BaseQRankSum=1.710;DP=448;FS=4.218;HRun=2;HaplotypeScore=164.2457;InbreedingCoeff=0.4472;MQ=34.40;MQ0=50;MQRankSum=-1.721;QD=31.20;ReadPosRankSum=1.274;VQSLOD=4.3751;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,15:18:45.15:668,45,0	1/1:13,2:12:27.09:373,27,0	1/1:3,7:3:8.99:110,9,0	0/0:3,2:2:1.97:0,2,15	1/1:1,30:28:69.23:1023,69,0	1/1:1,17:12:36.12:529,36,0	1/1:1,15:9:27.09:391,27,0	1/1:4,11:13:36.09:506,36,0	1/1:2,18:16:48.15:680,48,0	1/1:3,10:2:3.01:35,3,0	./.	1/1:3,16:16:45.15:654,45,0	1/1:1,20:20:60.11:834,60,0	1/1:0,26:24:72.24:1057,72,0	1/1:2,7:1:3.01:42,3,0	./.	1/1:12,1:11:32.92:414,33,0	./.	1/1:3,17:13:36.12:533,36,0	1/1:3,24:25:72.19:1016,72,0	1/1:5,5:7:9.03:133,9,0	1/1:3,19:19:54.17:762,54,0	1/1:0,23:22:63:936,63,0	1/1:1,10:10:15.44:173,15,0	./.	1/1:4,26:23:66.22:978,66,0	1/1:3,28:27:78.23:1113,78,0	1/1:0,6:6:18.06:269,18,0
chr10	44661313	.	G	GTA	819.86	PASS	AB=0.838;AC=17;AF=0.340;AN=50;BaseQRankSum=0.217;DP=738;FS=30.192;HRun=0;HaplotypeScore=80.7709;InbreedingCoeff=0.2988;MQ=20.41;MQ0=169;MQRankSum=-0.785;QD=2.64;ReadPosRankSum=2.358;VQSLOD=0.1936;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:31,15:7:12.04:224,12,0	0/0:31,0:30:84.29:0,84,1340	./.	./.	0/0:25,0:20:30.10:0,30,488	0/0:22,0:10:2.97:0,3,20	0/0:25,0:13:18.03:0,18,254	0/0:45,0:32:93.32:0,93,1507	0/0:26,0:19:18.06:0,18,294	0/0:25,0:12:32.47:0,32,498	0/0:13,0:7:12.04:0,12,185	1/1:22,15:7:9.03:122,9,0	0/0:30,1:14:9.03:0,9,146	0/1:24,8:11:66.59:67,0,86	0/0:29,13:11:3.01:0,3,48	1/1:22,8:11:3.01:56,3,0	0/1:36,6:14:23.63:24,0,197	./.	1/1:11,5:2:3.01:58,3,0	0/0:22,1:17:48.03:0,48,748	1/1:31,6:10:3:60,3,0	0/1:11,5:15:99:126,0,309	0/1:16,1:16:26.81:27,0,416	1/1:13,4:3:6.02:83,6,0	0/0:15,0:11:21.06:0,21,317	0/1:16,5:11:99:132,0,309	0/0:25,3:10:3.01:0,3,49	0/0:7,0:2:3.01:0,3,49
chr10	44661315	.	G	GGT	501.69	PASS	AB=0.879;AC=17;AF=0.340;AN=50;BaseQRankSum=0.788;DP=751;FS=40.900;HRun=0;HaplotypeScore=82.9345;InbreedingCoeff=0.2980;MQ=21.00;MQ0=167;MQRankSum=-1.556;QD=1.56;ReadPosRankSum=1.544;VQSLOD=-0.0803;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:52,0:13:12.03:129,12,0	0/0:32,0:31:74.75:0,75,662	./.	./.	0/0:24,0:20:33:0,33,413	0/0:21,0:9:2.97:0,3,20	0/0:24,0:12:11.99:0,12,150	0/0:46,0:32:90.29:0,90,1290	0/0:26,0:19:18.06:0,18,263	0/0:25,0:12:33:0,33,455	0/0:12,0:7:12:0,12,151	1/1:22,15:7:9.03:111,9,0	0/0:28,1:13:6.02:0,6,88	0/1:23,8:11:59.07:59,0,75	0/0:43,0:12:3.01:0,3,43	1/1:30,0:11:3.01:33,3,0	0/1:35,6:14:19.98:20,0,118	./.	1/1:16,0:2:3.01:33,3,0	0/0:24,0:18:15.39:0,15,621	1/1:38,0:10:5.16:25,5,0	0/1:13,5:17:99:111,0,273	0/1:16,1:16:31.66:32,0,334	1/1:15,4:5:6.02:72,6,0	0/0:17,0:13:17.95:0,18,176	0/1:22,0:12:35.86:36,0,266	0/0:29,0:10:2.98:0,3,44	0/0:7,0:2:3.01:0,3,44
chr10	44661642	.	C	CT	44.58	PASS	AB=0.800;AC=7;AF=0.146;AN=48;BaseQRankSum=2.260;DP=756;FS=21.311;HRun=8;HaplotypeScore=151.0472;InbreedingCoeff=0.6485;MQ=49.23;MQ0=76;MQRankSum=-5.192;QD=0.78;ReadPosRankSum=0.636;VQSLOD=-0.0434;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:15:42.02:0,42,384	0/0:37,2:37:90.04:0,90,823	0/0:19,0:12:24:0,24,217	0/0:29,0:14:26.32:0,26,225	0/0:26,3:27:56.05:0,56,500	0/0:42,0:41:99:0,105,956	0/0:22,0:22:53.97:0,54,486	0/0:56,0:54:99:0,150,1367	0/0:25,0:25:72.04:0,72,658	1/1:5,6:4:6.02:69,6,0	./.	0/0:38,0:28:78.04:0,78,714	0/0:43,0:36:99:0,99,906	0/0:37,0:34:90.05:0,90,823	./.	1/1:1,6:1:3.01:35,3,0	0/0:43,1:40:99:0,105,961	1/1:1,2:1:3.01:35,3,0	0/0:23,3:20:36.20:0,36,471	0/0:37,0:32:89.17:0,89,821	0/0:18,1:18:45.02:0,45,412	0/0:39,0:34:93.05:0,93,851	0/0:35,0:31:86.94:0,87,796	0/0:47,0:40:99:0,99,906	./.	0/0:31,3:29:17.88:0,18,672	0/1:27,9:28:23.40:23,0,456	./.
chr10	44661774	.	G	GT	2188.28	PASS	AB=0.728;AC=12;AF=0.214;AN=56;BaseQRankSum=0.270;DP=883;FS=14.775;HRun=7;HaplotypeScore=93.1748;InbreedingCoeff=-0.2702;MQ=44.74;MQ0=101;MQRankSum=-1.482;QD=4.42;ReadPosRankSum=2.981;VQSLOD=0.0021;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:30,17:43:99:275,0,463	0/1:24,4:33:99:115,0,260	0/0:23,0:4:8.52:0,9,84	0/0:26,0:7:20.40:0,20,181	0/1:27,19:36:99:224,0,338	0/0:27,0:26:75.11:0,75,719	0/0:18,0:18:45.07:0,45,435	0/0:39,0:39:81.11:0,81,778	0/0:19,0:19:48.05:0,48,457	0/1:18,8:19:99:133,0,265	0/1:21,12:28:3.33:3,0,257	0/0:23,0:17:48.07:0,48,458	0/0:21,0:16:42.06:0,42,406	0/0:33,0:27:78.13:0,78,753	0/0:14,4:11:12.02:0,12,116	0/0:22,4:22:33.04:0,33,319	0/1:38,19:62:99:463,0,421	0/0:9,4:10:21.03:0,21,203	0/1:12,8:17:99:122,0,222	0/1:34,23:45:99:305,0,485	0/1:24,20:43:99:342,0,457	0/0:30,0:22:48.06:0,48,463	0/0:36,0:26:50.19:0,50,491	0/0:31,0:26:48.04:0,48,457	0/1:16,14:18:59.34:59,0,198	0/1:28,12:32:99:206,0,495	0/1:33,12:33:90.76:91,0,634	0/0:5,0:5:15.02:0,15,145
chr10	44661918	.	AG	A	524.30	PASS	AB=0.761;AC=2;AF=0.036;AN=56;BaseQRankSum=7.582;DP=844;FS=8.634;HRun=3;HaplotypeScore=141.2330;InbreedingCoeff=-0.0395;MQ=51.77;MQ0=63;MQRankSum=-0.544;QD=5.35;ReadPosRankSum=2.284;VQSLOD=0.0932;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:33:99:0,99,1422	0/1:20,10:28:99:302,0,492	0/0:22,0:9:26.88:0,27,355	0/0:23,0:11:20.81:0,21,410	0/0:40,0:39:81.27:0,81,1165	0/0:16,0:16:48.16:0,48,691	0/0:35,0:35:99:0,99,1403	0/0:33,0:33:93.29:0,93,1303	0/0:26,0:26:75.25:0,75,1079	0/0:29,0:22:63.21:0,63,907	0/0:13,0:9:21.07:0,21,302	0/0:36,0:32:93.31:0,93,1337	0/0:32,0:24:60.20:0,60,862	0/0:29,0:25:72.24:0,72,1034	0/0:34,0:29:72.16:0,72,989	0/0:44,0:40:99:0,102,1445	0/1:48,20:61:99:311,0,1269	0/0:13,0:13:33.11:0,33,475	0/0:20,0:17:51.15:0,51,715	0/0:44,0:43:90.03:0,90,1276	0/0:47,0:47:99:0,135,1939	0/0:28,0:22:54.14:0,54,752	0/0:27,0:26:45.15:0,45,647	0/0:38,0:37:99:0,99,1407	0/0:16,0:14:42.14:0,42,604	0/0:27,0:24:66.22:0,66,951	0/0:36,0:34:93.29:0,93,1311	0/0:3,0:3:9.03:0,9,130
chr10	44663036	.	TCC	T	224.57	PASS	AB=0.795;AC=2;AF=0.036;AN=56;BaseQRankSum=4.372;DP=648;FS=7.302;HRun=3;HaplotypeScore=134.4068;InbreedingCoeff=-0.0392;MQ=62.09;MQ0=13;MQRankSum=-4.625;QD=3.12;ReadPosRankSum=2.469;VQSLOD=-0.3063;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:42:99:0,114,2075	0/1:9,5:14:99:189,0,424	0/0:16,0:15:42.09:0,42,643	0/0:15,0:15:45.03:0,45,674	0/0:25,0:23:66.18:0,66,1199	0/0:23,0:23:69.20:0,69,1237	0/0:17,0:17:51.17:0,51,985	0/0:22,0:22:66.21:0,66,1180	0/0:12,0:12:36.07:0,36,626	0/0:25,0:21:60.20:0,60,1129	0/0:24,0:22:66.22:0,66,1234	0/0:31,0:31:93.29:0,93,1662	0/0:13,0:13:39.13:0,39,753	0/0:16,0:15:39.07:0,39,652	0/0:15,0:15:45.13:0,45,798	0/0:18,0:17:45.13:0,45,803	0/1:48,10:56:99:124,0,2150	0/0:29,0:29:69.24:0,69,1293	0/0:34,0:32:87.28:0,87,1639	0/0:28,0:25:66.18:0,66,1236	0/0:39,0:38:99:0,108,2023	0/0:3,0:3:9.03:0,9,172	0/0:13,0:13:36.12:0,36,677	0/0:12,0:12:33.11:0,33,637	0/0:27,0:23:65.81:0,66,1151	0/0:26,0:23:66.23:0,66,1265	0/0:17,0:17:48.15:0,48,894	0/0:32,0:29:86.96:0,87,1434
chr10	44663178	.	T	TTAA	1485.23	PASS	AB=0.810;AC=17;AF=0.500;AN=34;BaseQRankSum=1.333;DP=251;FS=5.468;HRun=0;HaplotypeScore=57.9776;InbreedingCoeff=0.3490;MQ=48.34;MQ0=19;MQRankSum=-0.510;QD=10.17;ReadPosRankSum=0.473;VQSLOD=1.9087;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:10,2:12:2.67:58,3,0	1/1:14,0:12:3.23:27,3,0	./.	./.	1/1:8,0:10:11.88:97,12,0	0/1:10,1:11:37.02:37,0,215	0/0:4,0:4:3.01:0,3,40	0/0:16,0:24:13.55:0,14,102	0/0:11,0:11:12.04:0,12,160	./.	./.	0/0:2,0:3:0:0,0,0	0/0:1,0:3:2.98:0,3,21	0/0:4,0:4:2.98:0,3,21	./.	./.	1/1:34,0:26:21.86:174,22,0	./.	0/1:15,4:18:20.96:233,0,21	1/1:4,3:7:9.03:156,9,0	0/0:5,0:4:3.01:0,3,40	./.	./.	./.	./.	0/1:6,4:7:5.95:193,0,6	1/1:7,3:9:12.04:230,12,0	1/1:9,8:17:21.07:406,21,0
chr10	44663204	.	AATAATAATAAT	A	133.90	PASS	AB=1.000;AC=5;AF=0.104;AN=48;BaseQRankSum=3.152;DP=242;FS=17.373;HRun=0;HaplotypeScore=84.5107;InbreedingCoeff=0.1107;MQ=45.44;MQ0=30;MQRankSum=-2.690;QD=2.85;ReadPosRankSum=2.228;VQSLOD=0.5317;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:13,0:10:34.16:34,0,321	0/0:12,0:9:23.97:0,24,746	./.	./.	0/0:11,0:10:27.09:0,27,621	0/0:10,0:10:30.10:0,30,1459	0/0:4,0:4:12.04:0,12,362	0/0:31,0:30:84.28:0,84,1885	0/0:10,0:10:27.09:0,27,1118	./.	./.	0/0:4,0:4:9.92:0,10,171	0/0:3,0:2:3:0,3,29	0/0:5,0:2:3.01:0,3,31	0/0:2,0:1:1.25:0,1,3	1/1:6,0:3:3.01:65,3,0	0/0:27,0:22:51.17:0,51,1738	0/0:5,2:3:6.02:0,6,77	0/1:17,0:16:92.95:93,0,963	0/0:11,0:10:27.98:0,28,725	0/0:7,0:6:18.06:0,18,404	0/0:4,0:4:12.01:0,12,154	0/0:1,0:1:3.01:0,3,39	0/0:1,0:1:3.01:0,3,39	0/0:6,7:7:8.98:0,9,96	0/1:11,0:6:47.98:48,0,639	0/0:12,0:11:27.09:0,27,850	0/0:11,0:9:24.08:0,24,1178
chr10	44663215	.	T	TA	652.41	PASS	AB=0.813;AC=4;AF=0.080;AN=50;BaseQRankSum=8.922;DP=315;FS=2.203;HRun=2;HaplotypeScore=47.7872;InbreedingCoeff=-0.1248;MQ=48.25;MQ0=43;MQRankSum=1.410;QD=12.08;ReadPosRankSum=3.207;VQSLOD=2.3806;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:9:19.15:0,19,253	0/1:8,3:9:54.18:157,0,54	0/0:2,0:2:6.02:0,6,78	0/0:3,0:2:3.01:0,3,39	0/0:18,1:15:6.12:0,6,333	0/0:11,0:11:28.25:0,28,370	0/0:5,0:5:15.03:0,15,179	0/0:36,1:36:57.05:0,57,1095	0/0:14,0:14:36.12:0,36,466	./.	./.	0/0:8,0:8:21.05:0,21,256	0/0:4,0:3:5.97:0,6,58	0/0:7,0:4:8.98:0,9,97	./.	0/0:10,0:4:5.90:0,6,77	0/1:5,14:19:25.19:579,0,25	0/1:8,1:5:8.89:9,0,104	0/0:23,0:22:46.76:0,47,622	0/0:20,0:16:33.56:0,34,467	0/0:14,0:13:39.13:0,39,503	0/0:6,0:6:15.02:0,15,168	0/0:2,0:2:6.02:0,6,78	0/0:2,0:2:6.02:0,6,77	0/0:13,0:6:9.03:0,9,116	0/0:15,0:10:15.11:0,15,193	0/0:17,0:15:20.88:0,21,316	0/1:13,0:11:6.79:7,0,59
chr10	44663469	.	G	GT	5014.60	PASS	AB=0.790;AC=17;AF=0.304;AN=56;BaseQRankSum=4.017;DP=642;FS=5.504;HRun=7;HaplotypeScore=85.8034;InbreedingCoeff=0.8984;MQ=62.86;MQ0=16;MQRankSum=2.017;QD=20.47;ReadPosRankSum=1.593;VQSLOD=4.2816;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,23:24:60.18:725,60,0	0/0:15,2:15:5.85:0,6,340	0/0:15,0:12:33.05:0,33,317	0/0:24,0:21:29.41:0,29,362	1/1:3,13:15:35.94:413,36,0	0/0:32,0:32:84.12:0,84,811	0/0:22,0:22:57.09:0,57,550	0/0:34,0:34:84.10:0,84,803	0/0:11,0:11:32.95:0,33,306	0/0:22,0:20:51.08:0,51,493	0/0:19,0:17:51.08:0,51,493	0/0:28,0:28:75.11:0,75,724	0/0:26,0:26:75.11:0,75,719	0/0:21,0:21:63.09:0,63,600	0/0:22,0:22:63.09:0,63,603	0/0:22,0:22:63.10:0,63,608	0/1:47,17:62:99:206,0,1059	0/0:11,0:11:33.05:0,33,318	1/1:3,22:20:54.17:652,54,0	1/1:4,15:19:47.74:517,48,0	1/1:3,21:23:48.15:580,48,0	0/0:17,0:17:51.06:0,51,485	0/0:17,0:17:48.07:0,48,464	0/0:19,0:19:51.08:0,51,492	0/0:13,0:11:33.05:0,33,319	1/1:4,18:19:57:652,57,0	1/1:7,28:34:78.07:920,78,0	1/1:2,10:12:30.08:351,30,0
chr10	44664205	.	AT	A	596.85	PASS	AB=0.782;AC=2;AF=0.036;AN=56;BaseQRankSum=7.269;DP=982;FS=6.809;HRun=1;HaplotypeScore=118.6991;InbreedingCoeff=-0.0371;MQ=56.72;MQ0=31;MQRankSum=1.140;QD=5.53;ReadPosRankSum=-0.276;VQSLOD=0.1698;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:26:75.19:0,75,1029	0/1:27,13:32:99:406,0,624	0/0:25,0:13:39.12:0,39,578	0/0:16,0:9:27.07:0,27,375	0/0:39,0:37:98.96:0,99,1395	0/0:27,0:27:81.24:0,81,1215	0/0:20,0:20:60.19:0,60,896	0/0:43,0:42:99:0,126,1847	0/0:23,0:23:66.20:0,66,984	0/0:46,0:37:99:0,105,1474	0/0:36,0:35:99:0,99,1435	0/0:22,0:15:44.88:0,45,635	0/0:36,0:29:87.26:0,87,1269	0/0:40,0:31:93.29:0,93,1365	0/0:26,0:21:60.20:0,60,900	0/0:41,0:34:99:0,102,1500	0/1:52,16:62:99:280,0,1299	0/0:43,0:41:99:0,111,1438	0/0:27,0:26:78.01:0,78,1007	0/0:52,0:45:99:0,129,1772	0/0:31,0:29:78.04:0,78,1001	0/0:35,0:33:99:0,99,1398	0/0:30,0:27:78.21:0,78,1057	0/0:32,0:31:93.18:0,93,1253	0/0:35,0:32:90.21:0,90,1185	0/0:50,0:45:99:0,132,1844	0/0:52,0:45:99:0,129,1793	0/0:20,0:20:53.78:0,54,668
chr10	44664630	.	T	TC	5267.70	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-9.816;DP=803;FS=1.247;HRun=0;HaplotypeScore=84.6799;InbreedingCoeff=0.9725;MQ=51.61;MQ0=37;MQRankSum=5.927;QD=38.17;ReadPosRankSum=2.662;VQSLOD=5.2832;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:30:78.23:0,78,1069	0/0:40,0:31:84.27:0,84,1095	0/0:24,0:6:12.04:0,12,168	0/0:27,0:9:27.09:0,27,376	0/0:30,0:27:60.20:0,60,838	0/0:25,0:25:75.24:0,75,1032	0/0:25,0:25:66.22:0,66,921	0/0:33,0:33:99:0,99,1327	0/0:30,0:30:90.28:0,90,1239	0/0:30,0:28:84.28:0,84,1162	0/0:20,0:20:48.15:0,48,655	1/1:1,29:27:81.28:1292,81,0	1/1:1,23:22:54.18:863,54,0	1/1:1,21:20:54.18:861,54,0	0/0:30,0:28:75.24:0,75,1030	0/0:20,0:15:39.12:0,39,527	0/0:119,0:115:99:0,291,3750	0/0:20,0:16:42.14:0,42,587	0/0:14,0:11:27.09:0,27,377	0/0:42,0:42:99:0,123,1696	0/0:22,0:21:54.17:0,54,738	1/1:1,16:16:33.11:527,33,0	1/1:3,20:20:54.18:863,54,0	1/1:0,22:20:54.18:862,54,0	0/0:25,0:22:54.14:0,54,755	0/0:29,0:27:72.21:0,72,981	0/0:21,0:16:36.12:0,36,503	0/0:5,0:5:6.02:0,6,84
chr10	44665340	.	A	ATGGAGAGCTGG	12877.04	PASS	AB=0.977;AC=31;AF=0.574;AN=54;BaseQRankSum=7.016;DP=654;FS=11.487;HRun=0;HaplotypeScore=168.7200;InbreedingCoeff=0.8202;MQ=56.60;MQ0=6;MQRankSum=-13.528;QD=49.53;ReadPosRankSum=-0.933;VQSLOD=3.9292;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,15:24:9.09:1268,9,0	1/1:1,4:11:9.03:453,9,0	0/0:27,0:20:60.18:0,60,1899	0/0:34,0:24:30.68:0,31,1951	1/1:1,12:16:15.05:708,15,0	0/0:21,0:21:60.19:0,60,2085	0/0:30,0:30:90.30:0,90,3169	0/0:37,0:37:99:0,111,3429	0/0:36,0:36:99:0,105,3276	1/1:0,10:10:17.71:1064,18,0	1/1:0,7:6:6.02:266,6,0	0/0:48,0:47:99:0,141,4542	0/0:37,0:37:99:0,111,3920	0/1:41,1:42:59.31:59,0,3710	./.	1/1:0,18:17:12.51:626,13,0	1/1:3,4:7:3.01:157,3,0	1/1:0,3:3:6.02:355,6,0	1/1:0,2:7:18.06:731,18,0	1/1:1,10:14:18.06:888,18,0	1/1:2,4:10:12:459,12,0	0/0:31,0:31:93.29:0,93,3014	0/0:30,0:30:87.28:0,87,3018	0/0:46,0:46:99:0,138,4895	1/1:0,3:8:6.02:292,6,0	1/1:1,17:22:60.14:3089,60,0	1/1:0,19:27:30.10:1752,30,0	1/1:0,6:5:12.04:709,12,0
chr10	44665478	.	GA	G	3997.88	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=0.948;DP=794;FS=2.697;HRun=4;HaplotypeScore=120.6890;InbreedingCoeff=0.9866;MQ=55.08;MQ0=14;MQRankSum=3.262;QD=24.53;ReadPosRankSum=3.146;VQSLOD=2.4115;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,99,1367	0/0:16,0:13:33.03:0,33,421	0/0:29,0:7:21.02:0,21,248	0/0:17,0:3:9.03:0,9,117	0/0:27,0:15:42.14:0,42,588	0/0:19,0:19:54.18:0,54,755	0/0:26,0:26:75.19:0,75,987	0/0:35,0:35:99:0,102,1364	0/0:30,0:30:84.26:0,84,1158	1/1:0,18:15:39.09:453,39,0	1/1:0,20:12:33.06:380,33,0	0/0:34,0:34:96.27:0,96,1278	0/0:26,0:26:75.24:0,75,1035	0/0:29,0:29:78.25:0,78,1075	1/1:0,39:38:75.23:899,75,0	1/1:2,28:29:57.17:683,57,0	0/0:41,0:40:86.95:0,87,1160	1/1:1,20:21:54.17:648,54,0	0/0:23,0:23:66.13:0,66,841	0/0:38,0:32:96.31:0,96,1317	0/0:45,0:44:99:0,132,1827	0/0:24,0:24:69.21:0,69,936	0/0:24,0:23:63.21:0,63,882	0/0:38,0:38:99:0,111,1500	1/1:1,34:28:78.24:934,78,0	0/0:32,2:32:24.27:0,24,1137	0/0:23,1:23:30.19:0,30,795	0/0:17,0:10:27.09:0,27,378
chr10	44665732	.	GT	G	239.63	PASS	AB=0.713;AC=2;AF=0.036;AN=56;BaseQRankSum=1.712;DP=611;FS=18.149;HRun=4;HaplotypeScore=81.9652;InbreedingCoeff=-0.0468;MQ=47.16;MQ0=78;MQRankSum=-2.086;QD=5.21;ReadPosRankSum=-1.074;VQSLOD=-0.5886;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:13:33.10:0,33,445	0/1:14,7:15:91.77:92,0,279	0/0:15,0:3:3.01:0,3,32	0/0:17,0:5:12.04:0,12,167	0/0:30,0:12:33.11:0,33,459	0/0:34,0:34:99:0,102,1428	0/0:7,0:7:21.05:0,21,276	0/0:37,0:34:93.30:0,93,1272	0/0:23,0:23:66.21:0,66,904	0/0:19,0:12:36.12:0,36,504	0/0:31,0:15:42.13:0,42,570	0/0:23,0:22:60.20:0,60,840	0/0:34,0:29:84.28:0,84,1175	0/0:28,0:24:60.16:0,60,817	0/0:18,0:11:33.11:0,33,462	0/0:15,0:10:15.05:0,15,210	0/1:13,12:22:99:237,0,307	0/0:16,0:13:39.13:0,39,541	0/0:19,0:9:27.09:0,27,378	0/0:30,0:20:51.17:0,51,713	0/0:7,0:6:18.06:0,18,252	0/0:19,0:17:45.14:0,45,614	0/0:33,0:33:90.30:0,90,1259	0/0:7,0:7:18.05:0,18,237	0/0:21,0:14:36.12:0,36,504	0/0:20,0:16:48.14:0,48,640	0/0:34,0:24:66.22:0,66,920	0/0:11,0:4:12.04:0,12,168
chr10	44665762	.	C	CA	8843.94	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-2.621;DP=546;FS=0.966;HRun=1;HaplotypeScore=45.4608;InbreedingCoeff=0.8709;MQ=52.22;MQ0=84;MQRankSum=-1.324;QD=20.05;ReadPosRankSum=1.125;VQSLOD=4.9680;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,11:6:12:155,12,0	1/1:2,11:5:9.03:135,9,0	0/0:10,0:9:27.08:0,27,340	0/0:9,0:4:12.04:0,12,151	1/1:4,31:8:21.06:295,21,0	0/0:28,0:28:84.26:0,84,1076	0/0:6,0:6:18.06:0,18,234	0/0:32,0:32:96.30:0,96,1235	0/0:20,0:20:57.19:0,57,740	1/1:0,20:3:9.03:135,9,0	1/1:4,27:7:15.05:225,15,0	1/1:2,24:23:60.01:899,60,0	1/1:3,32:30:84.28:1259,84,0	1/1:1,22:19:48.16:719,48,0	1/1:5,14:7:18.06:268,18,0	1/1:1,13:4:6.02:90,6,0	1/1:3,12:12:21:266,21,0	1/1:2,9:8:21.07:314,21,0	1/1:3,10:3:9.03:134,9,0	1/1:4,26:9:24.08:353,24,0	1/1:0,2:1:3.01:45,3,0	1/1:2,19:20:48.16:720,48,0	1/1:0,31:31:81.27:1215,81,0	1/1:0,12:11:24.05:336,24,0	1/1:0,19:8:18.06:270,18,0	1/1:2,14:8:24.07:339,24,0	1/1:2,29:13:39.13:584,39,0	1/1:2,10:2:6.02:90,6,0
chr10	44665940	.	A	AAAT	585.54	PASS	AB=0.661;AC=2;AF=0.036;AN=56;BaseQRankSum=3.472;DP=596;FS=18.636;HRun=0;HaplotypeScore=91.9723;InbreedingCoeff=-0.0422;MQ=53.07;MQ0=71;MQRankSum=-0.921;QD=17.74;ReadPosRankSum=0.780;VQSLOD=1.8954;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:15:45.15:0,45,749	0/1:7,7:14:99:303,0,313	0/0:16,0:4:6.02:0,6,89	0/0:15,0:6:12.51:0,13,193	0/0:20,0:19:51.17:0,51,844	0/0:19,0:19:54.18:0,54,900	0/0:10,0:10:27.08:0,27,426	0/0:32,0:26:75.24:0,75,1219	0/0:11,0:11:33.10:0,33,524	0/0:26,0:24:69.24:0,69,1149	0/0:22,0:19:54.18:0,54,898	0/0:30,0:26:72.22:0,72,1149	0/0:39,0:35:99:0,102,1694	0/0:26,0:23:54.18:0,54,890	0/0:12,0:8:24.08:0,24,400	0/0:14,0:9:24.08:0,24,400	0/1:9,10:14:99:371,0,264	0/0:10,0:10:27.09:0,27,440	0/0:16,0:13:36.12:0,36,577	0/0:24,0:18:54.05:0,54,798	0/0:10,0:10:30.10:0,30,500	0/0:32,0:28:78.27:0,78,1294	0/0:35,0:30:81.28:0,81,1348	0/0:28,0:27:81.21:0,81,1270	0/0:32,0:29:81.28:0,81,1348	0/0:17,0:16:48.16:0,48,796	0/0:29,0:23:69.24:0,69,1145	0/0:20,0:19:57.18:0,57,918
chr10	44666121	.	G	GA	890.70	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.683;DP=669;FS=2.665;HRun=1;HaplotypeScore=67.5000;InbreedingCoeff=0.9870;MQ=65.99;MQ0=18;MQRankSum=-4.119;QD=31.81;ReadPosRankSum=1.937;VQSLOD=3.4594;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:25:66.21:0,66,856	1/1:0,6:5:15.05:225,15,0	0/0:23,0:22:66.21:0,66,852	0/0:15,0:13:36.08:0,36,429	0/0:35,0:26:69.22:0,69,893	0/0:21,0:21:54.15:0,54,685	0/0:23,0:23:54.17:0,54,700	0/0:33,0:33:96.30:0,96,1223	0/0:21,0:21:63.20:0,63,818	0/0:32,1:31:93.30:0,93,1208	0/0:28,0:17:51.17:0,51,661	0/0:29,2:30:39.40:0,39,1005	0/0:26,0:26:78.25:0,78,1010	0/0:20,1:20:57.19:0,57,739	0/0:32,1:32:90.28:0,90,1154	0/0:27,2:27:75.24:0,75,972	1/1:1,21:21:54.15:785,54,0	0/0:37,1:38:60.38:0,60,1245	0/0:14,0:13:39.13:0,39,506	0/0:36,0:29:81.25:0,81,1037	0/0:14,0:14:42.12:0,42,531	0/0:22,0:22:66.20:0,66,840	0/0:24,2:25:66.21:0,66,857	0/0:10,0:10:27.09:0,27,347	0/0:31,0:29:84.27:0,84,1087	0/0:23,0:17:48.14:0,48,609	0/0:21,0:17:45.15:0,45,583	0/0:8,0:6:18.06:0,18,231
chr10	44666576	.	TGGTGCCTGTGCATGTGCATATGTGTGTGCCTGTGCC	T	2984.08	PASS	AC=10;AF=0.278;AN=36;BaseQRankSum=4.593;DP=741;FS=1.321;HRun=0;HaplotypeScore=113.8767;InbreedingCoeff=0.5853;MQ=15.50;MQ0=572;MQRankSum=-3.224;QD=28.69;ReadPosRankSum=1.721;VQSLOD=1.8310;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:23,0:12:9.36:0,9,1066	./.	./.	0/0:25,0:16:6.02:0,6,752	0/0:26,0:4:6.02:0,6,795	./.	./.	0/0:24,0:2:3.01:0,3,371	0/0:35,0:20:50.24:0,50,4823	0/0:21,0:14:9.03:0,9,1254	1/1:17,6:6:9.03:821,9,0	1/1:18,4:4:3.01:274,3,0	1/1:21,3:3:6.02:547,6,0	0/0:24,0:5:6.02:0,6,909	./.	./.	0/0:19,0:2:3.01:0,3,81	./.	0/0:15,0:13:9.03:0,9,936	./.	1/1:5,12:14:9.03:813,9,0	1/1:6,12:14:9.03:657,9,0	./.	0/0:28,0:18:11.80:0,12,1203	0/0:21,0:4:12:0,12,1450	0/0:19,0:2:3.01:0,3,53	0/0:3,0:2:3.01:0,3,121
chr10	44666992	.	G	GT	582.44	PASS	AB=0.760;AC=3;AF=0.054;AN=56;BaseQRankSum=2.785;DP=578;FS=3.416;HRun=1;HaplotypeScore=114.3016;InbreedingCoeff=0.7583;MQ=60.04;MQ0=8;MQRankSum=-1.918;QD=7.56;ReadPosRankSum=2.601;VQSLOD=1.1728;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:71.05:0,71,630	0/1:0,6:18:2.22:158,0,2	0/0:19,0:18:33.61:0,34,424	0/0:9,0:8:18.02:0,18,223	0/0:27,0:27:55.45:0,55,675	0/0:20,0:20:45.12:0,45,607	0/0:18,0:18:54.07:0,54,704	0/0:28,0:28:77.56:0,78,753	0/0:14,0:14:36.08:0,36,481	0/0:22,0:20:57.10:0,57,780	0/0:21,0:19:51.17:0,51,705	0/0:9,0:8:20.98:0,21,263	0/0:17,0:16:42.10:0,42,558	0/0:21,0:16:33.07:0,33,433	0/0:32,0:30:78.24:0,78,1053	0/0:21,0:20:57.19:0,57,784	1/1:7,25:46:15.61:527,16,0	0/0:21,0:21:63.16:0,63,838	0/0:17,0:16:30.76:0,31,452	0/0:20,0:20:56.93:0,57,553	0/0:17,0:17:38.24:0,38,330	0/0:23,0:23:64.98:0,65,855	0/0:23,0:23:66.21:0,66,899	0/0:19,0:17:34.66:0,35,463	0/0:15,0:15:42.10:0,42,560	0/0:16,0:16:48.04:0,48,490	0/0:20,0:19:50.62:0,51,444	0/0:3,0:3:8.99:0,9,73
chr10	44666993	.	G	GTT	5621.07	PASS	AB=1.000;AC=20;AF=0.357;AN=56;BaseQRankSum=1.364;DP=592;FS=0.366;HRun=10;HaplotypeScore=114.5330;InbreedingCoeff=0.8127;MQ=59.84;MQ0=8;MQRankSum=1.933;QD=21.45;ReadPosRankSum=-2.058;VQSLOD=3.6232;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,24:32:73.50:1007,74,0	0/1:19,0:18:49.35:49,0,56	0/0:19,0:18:8.74:0,9,180	0/0:9,0:8:11.95:0,12,109	1/1:8,18:26:51.05:681,51,0	0/0:21,0:21:38.77:0,39,380	0/0:15,0:18:26.21:0,26,350	1/1:6,20:30:62.90:863,63,0	0/0:13,0:16:26.77:0,27,320	0/0:22,0:20:50.92:0,51,518	0/0:21,0:19:41.94:0,42,413	0/0:10,0:8:8.98:0,9,91	0/0:17,0:17:41.80:0,42,402	0/0:21,0:16:30.05:0,30,304	0/0:32,0:30:69.04:0,69,675	0/0:22,0:21:45.04:0,45,457	0/1:58,0:46:96.14:301,0,96	0/0:21,0:21:28.33:0,28,437	1/1:6,12:17:39.08:520,39,0	1/1:7,15:22:46.79:576,47,0	1/1:4,11:17:32.59:439,33,0	0/0:21,0:23:41.50:0,41,514	0/0:23,0:23:56.98:0,57,560	0/0:18,0:17:20.76:0,21,255	0/0:15,0:15:39.05:0,39,395	1/1:5,8:16:32.53:375,33,0	1/1:6,15:20:46.97:675,47,0	1/1:0,3:3:9.03:134,9,0
chr10	44667023	.	T	TAGCAGC	2277.88	PASS	AB=0.875;AC=21;AF=0.438;AN=48;BaseQRankSum=-0.225;DP=524;FS=30.830;HRun=0;HaplotypeScore=130.8157;InbreedingCoeff=0.8010;MQ=56.84;MQ0=10;MQRankSum=-5.610;QD=12.87;ReadPosRankSum=1.345;VQSLOD=1.2931;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:19:2.99:23,3,0	0/0:14,0:14:8.98:0,9,145	0/0:27,0:20:21.07:0,21,412	0/0:21,0:16:29.70:0,30,482	./.	0/0:20,0:20:27.02:0,27,502	0/0:15,0:15:33.09:0,33,639	0/0:30,0:30:54.12:0,54,940	0/0:24,0:24:57.16:0,57,1106	0/0:14,0:13:8.95:0,9,107	./.	1/1:1,6:5:6.02:198,6,0	1/1:15,7:20:14.88:436,15,0	1/1:10,15:19:23.76:769,24,0	0/0:21,0:20:42.13:0,42,845	0/0:21,0:21:39.11:0,39,716	0/0:38,0:36:45.08:0,45,772	0/0:14,0:14:24.08:0,24,487	1/1:14,0:10:8.99:107,9,0	1/1:17,0:17:5.99:50,6,0	0/1:12,0:13:0:0,0,0	./.	./.	1/1:12,5:15:6.02:197,6,0	0/0:15,0:15:8.98:0,9,119	1/1:13,0:12:5.96:44,6,0	1/1:16,1:18:24.07:565,24,0	1/1:1,0:1:3.01:67,3,0
chr10	44667522	.	A	AT	2666.86	PASS	AB=0.766;AC=22;AF=0.393;AN=56;BaseQRankSum=13.597;DP=619;FS=2.637;HRun=6;HaplotypeScore=76.1904;InbreedingCoeff=0.6865;MQ=61.56;MQ0=28;MQRankSum=-3.959;QD=9.77;ReadPosRankSum=1.100;VQSLOD=1.2395;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,17:12:24.08:302,24,0	1/1:5,24:26:45.11:549,45,0	0/0:23,0:19:51.05:0,51,496	0/0:17,0:15:39.02:0,39,373	1/1:2,16:10:15.05:189,15,0	0/0:22,0:22:45.08:0,45,451	0/0:19,0:19:54.12:0,54,551	0/0:30,0:30:81.17:0,81,821	0/0:22,0:22:63.14:0,63,643	0/1:25,3:27:3.26:3,0,579	0/1:22,7:26:56.05:56,0,418	0/0:26,0:26:75.11:0,75,737	0/0:25,0:25:72.15:0,72,729	0/0:34,0:34:99:0,99,982	0/0:30,0:30:84.16:0,84,843	0/0:15,0:15:42.09:0,42,428	1/1:11,33:41:72.06:864,72,0	0/0:15,0:14:33.04:0,33,327	1/1:6,8:8:15.03:172,15,0	1/1:1,15:9:15.05:189,15,0	1/1:4,11:10:12.04:151,12,0	0/0:28,0:28:78.06:0,78,782	0/0:22,0:22:63.14:0,63,643	0/0:18,0:18:48.11:0,48,490	0/1:20,6:21:18.24:18,0,463	0/1:2,11:7:12.58:157,0,13	1/1:8,10:12:15.05:186,15,0	1/1:2,2:3:3.01:38,3,0
chr10	44668176	.	A	AT	4042.59	PASS	AB=0.871;AC=14;AF=0.269;AN=52;BaseQRankSum=-3.537;DP=636;FS=0.000;HRun=6;HaplotypeScore=62.0004;InbreedingCoeff=0.8011;MQ=47.72;MQ0=67;MQRankSum=3.520;QD=18.13;ReadPosRankSum=0.463;VQSLOD=3.1482;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:24:51.09:0,51,512	0/1:14,5:24:99:116,0,261	./.	./.	0/0:21,0:20:41.97:0,42,427	0/0:26,0:26:63.14:0,63,642	0/0:13,0:13:24.05:0,24,245	0/0:39,0:31:78.17:0,78,795	0/0:15,0:15:33.08:0,33,337	1/1:2,26:28:75.24:943,75,0	1/1:3,27:29:63.20:788,63,0	0/0:20,0:20:54.12:0,54,551	0/0:22,0:22:57.13:0,57,581	0/0:15,0:15:42.10:0,42,428	1/1:0,18:18:39.12:491,39,0	1/1:2,24:26:63.02:780,63,0	0/1:27,5:39:55.85:56,0,346	1/1:5,21:18:30.10:377,30,0	0/0:12,0:7:18.04:0,18,184	0/0:30,0:25:63.14:0,63,643	0/0:14,0:14:33.06:0,33,330	0/0:17,0:17:39.09:0,39,398	0/0:23,0:23:63.14:0,63,642	0/0:15,0:15:33.07:0,33,336	1/1:2,23:24:39.12:491,39,0	0/0:25,0:25:72.16:0,72,734	0/0:34,0:31:78.18:0,78,795	0/0:8,0:8:18.04:0,18,184
chr10	44668719	.	T	TA	1187.14	PASS	AB=0.522;AC=15;AF=0.288;AN=52;BaseQRankSum=3.295;DP=551;FS=0.000;HRun=7;HaplotypeScore=47.9875;InbreedingCoeff=0.8505;MQ=55.26;MQ0=25;MQRankSum=-6.488;QD=9.73;ReadPosRankSum=0.129;VQSLOD=0.5179;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,7:10:15.05:180,15,0	./.	0/0:18,0:3:9.01:0,9,87	0/0:22,0:6:9:0,9,81	0/1:1,11:6:13.90:114,0,14	0/0:21,0:21:57.09:0,57,550	0/0:23,0:23:63.07:0,63,598	0/0:40,0:39:99:0,102,985	0/0:30,0:30:75.09:0,75,712	0/0:22,0:22:60.08:0,60,575	0/0:28,0:28:78.12:0,78,752	0/0:21,0:21:60.08:0,60,574	0/0:31,0:31:81.12:0,81,782	0/0:24,0:24:63.10:0,63,608	0/0:22,0:22:60.09:0,60,579	0/0:22,0:22:60.09:0,60,576	./.	0/0:8,0:8:24.04:0,24,232	1/1:2,13:11:24.06:276,24,0	1/1:2,20:9:9.03:109,9,0	1/1:2,11:11:18.06:217,18,0	0/0:18,0:18:45.07:0,45,434	0/0:20,0:20:51.03:0,51,491	0/0:20,0:20:60.10:0,60,579	0/0:29,0:29:81.08:0,81,767	1/1:1,13:7:15.04:170,15,0	1/1:4,22:13:21:235,21,0	1/1:2,5:6:6.02:72,6,0
chr10	44669185	.	A	AT	552.59	PASS	AB=0.712;AC=2;AF=0.036;AN=56;BaseQRankSum=-3.093;DP=499;FS=3.046;HRun=5;HaplotypeScore=56.5857;InbreedingCoeff=-0.0389;MQ=66.30;MQ0=0;MQRankSum=-0.569;QD=11.05;ReadPosRankSum=0.886;VQSLOD=0.8108;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:30.05:0,30,313	0/1:12,10:22:99:341,0,196	0/0:8,0:8:21.05:0,21,226	0/0:9,0:8:15.03:0,15,160	0/0:31,0:31:93.23:0,93,999	0/0:16,0:16:45.11:0,45,484	0/0:8,0:8:24.06:0,24,258	0/0:31,0:31:87.20:0,87,927	0/0:17,0:16:48.12:0,48,516	0/0:26,0:26:72.17:0,72,767	0/0:16,0:16:45.11:0,45,483	0/0:11,0:11:33.08:0,33,354	0/0:24,0:24:69.15:0,69,733	0/0:18,0:17:48.11:0,48,507	0/0:23,0:23:60.15:0,60,645	0/0:18,0:18:54.14:0,54,580	0/1:18,10:26:99:301,0,264	0/0:14,0:14:39.10:0,39,419	0/0:17,0:17:48.08:0,48,504	0/0:25,0:23:69.17:0,69,741	0/0:7,0:7:21.05:0,21,226	0/0:18,0:18:45.11:0,45,483	0/0:22,0:22:63.14:0,63,668	0/0:6,0:6:15.02:0,15,153	0/0:15,0:15:42.11:0,42,451	0/0:24,0:24:63.13:0,63,662	0/0:27,0:27:81.20:0,81,870	0/0:7,0:7:18.04:0,18,193
chr10	44670393	.	CG	C	96.09	PASS	AB=0.761;AC=2;AF=0.036;AN=56;BaseQRankSum=3.601;DP=543;FS=6.287;HRun=1;HaplotypeScore=73.1762;InbreedingCoeff=-0.0380;MQ=59.26;MQ0=8;MQRankSum=-4.018;QD=3.70;ReadPosRankSum=0.690;VQSLOD=0.2422;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:47.89:0,48,388	0/1:7,4:9:89.45:89,0,115	0/0:23,0:8:24.06:0,24,323	0/0:16,0:6:15.04:0,15,214	0/0:26,0:26:74.81:0,75,609	0/0:23,0:23:69.21:0,69,1051	0/0:12,0:12:36.11:0,36,552	0/0:36,0:34:99:0,99,1578	0/0:14,0:14:42.14:0,42,671	0/0:31,0:31:93.30:0,93,1446	0/0:16,0:16:45.15:0,45,713	0/0:14,0:14:42.14:0,42,668	0/0:23,0:23:69.19:0,69,1032	0/0:18,0:18:54.13:0,54,810	0/0:21,0:21:60.20:0,60,958	0/0:19,0:19:54.17:0,54,837	0/1:11,4:12:85.54:95,0,86	0/0:10,0:10:30.10:0,30,479	0/0:13,0:12:35.71:0,36,258	0/0:31,0:30:86.70:0,87,685	0/0:8,0:8:23.91:0,24,185	0/0:18,0:18:54.18:0,54,835	0/0:19,0:19:48.16:0,48,766	0/0:15,0:15:42.14:0,42,671	0/0:28,0:28:84.23:0,84,1269	0/0:29,0:29:86.32:0,86,660	0/0:31,0:31:74.72:0,75,592	0/0:7,0:7:20.94:0,21,166
chr10	44670470	.	A	AT	6775.39	PASS	AB=0.521;AC=18;AF=0.321;AN=56;BaseQRankSum=0.095;DP=522;FS=1.592;HRun=0;HaplotypeScore=55.6297;InbreedingCoeff=0.8381;MQ=64.17;MQ0=2;MQRankSum=-6.554;QD=38.28;ReadPosRankSum=2.551;VQSLOD=5.1469;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,17:17:51.17:812,51,0	0/1:1,13:14:8.83:414,0,9	0/0:22,0:18:53.37:0,53,627	0/0:17,0:17:48.07:0,48,613	1/1:0,32:30:87.09:1280,87,0	0/0:23,0:23:69.21:0,69,930	0/0:5,0:5:15.04:0,15,194	0/0:27,0:26:81.23:0,81,1068	0/0:13,0:13:39.13:0,39,540	0/0:28,0:28:77.84:0,78,1024	0/0:28,0:28:81.26:0,81,1113	0/0:9,0:9:27.07:0,27,359	0/0:22,0:22:66.21:0,66,906	0/0:16,0:16:48.13:0,48,635	0/0:17,0:17:51.17:0,51,711	0/0:21,0:21:63.18:0,63,843	1/1:1,9:9:24.01:344,24,0	0/0:16,0:16:42.05:0,42,525	1/1:0,14:13:37.66:552,38,0	1/1:0,27:24:63.21:985,63,0	1/1:0,5:5:12.04:191,12,0	0/0:21,0:21:63.18:0,63,845	0/0:26,0:26:78.21:0,78,1032	0/0:8,0:8:24.07:0,24,319	0/0:25,0:25:69.19:0,69,899	0/1:2,21:22:17.65:860,0,18	1/1:0,27:27:66.23:1051,66,0	1/1:0,7:8:18.06:287,18,0
chr10	44670818	.	T	TC	819.26	PASS	AB=0.722;AC=12;AF=0.214;AN=56;BaseQRankSum=-3.687;DP=573;FS=11.728;HRun=10;HaplotypeScore=98.6930;InbreedingCoeff=0.5420;MQ=66.57;MQ0=9;MQRankSum=-0.435;QD=6.30;ReadPosRankSum=-0.637;VQSLOD=0.6924;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:46.80:0,47,184	0/0:10,0:8:8.02:0,8,24	0/0:30,0:25:24.23:0,24,218	0/0:30,1:26:5.71:0,6,166	0/0:31,0:31:66.52:0,67,296	0/0:27,0:30:80.75:0,81,608	1/1:4,13:17:20.79:204,21,0	0/0:16,0:30:35.33:0,35,121	0/0:11,0:11:26.96:0,27,222	0/0:19,0:19:47.89:0,48,385	0/0:18,0:18:45.63:0,46,352	1/1:4,10:14:14.97:145,15,0	1/1:3,11:14:15.04:160,15,0	0/1:5,12:16:9.60:110,0,10	0/0:25,0:25:59.81:0,60,479	0/0:16,0:16:44.60:0,45,353	0/1:17,0:17:9.42:9,0,14	0/0:15,0:12:35.87:0,36,284	0/0:20,0:17:37.08:0,37,171	0/0:23,0:22:35.36:0,35,167	0/0:25,0:22:34.98:0,35,128	0/1:6,13:19:46.28:141,0,46	1/1:4,11:15:8.80:84,9,0	0/1:10,7:17:49.83:136,0,50	0/0:24,1:24:58.89:0,59,459	0/0:18,0:17:36.01:0,36,158	0/0:30,0:30:46.57:0,47,199	0/0:5,0:5:10.38:0,10,39
chr10	44670826	.	CCCT	C	355.17	PASS	AB=0.796;AC=4;AF=0.071;AN=56;BaseQRankSum=4.482;DP=586;FS=3.548;HRun=0;HaplotypeScore=118.1997;InbreedingCoeff=0.4067;MQ=66.48;MQ0=10;MQRankSum=-4.647;QD=6.58;ReadPosRankSum=-1.291;VQSLOD=2.8274;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:43.94:0,44,341	1/1:11,2:6:14.93:156,15,0	0/0:26,0:17:41.58:0,42,598	0/0:30,0:24:45.27:0,45,791	0/0:34,0:34:50.92:0,51,573	0/0:30,0:30:90.28:0,90,1813	0/0:19,0:19:33.06:0,33,452	0/0:28,0:26:60.79:0,61,596	0/0:12,0:12:36.07:0,36,702	0/0:21,0:21:63.20:0,63,1250	0/0:21,0:21:56.23:0,56,1053	0/0:21,0:21:39:0,39,491	0/0:13,0:13:21.06:0,21,324	0/0:17,0:16:24.05:0,24,367	0/0:23,0:23:69.22:0,69,1463	0/0:17,0:17:51.17:0,51,1089	0/1:5,11:16:57.23:238,0,57	0/0:17,0:14:42.11:0,42,859	0/0:17,0:15:24.28:0,24,280	0/0:23,0:20:38.27:0,38,360	0/0:24,0:22:5.33:0,5,213	0/0:24,0:24:57.11:0,57,816	0/0:18,0:18:26.37:0,26,324	0/0:14,0:14:36.11:0,36,657	0/0:24,0:22:66.20:0,66,1289	0/1:25,0:23:73.28:73,0,268	0/0:25,0:25:21.62:0,22,338	0/0:6,0:6:11.61:0,12,63
chr10	44670827	.	CCT	C	404.19	PASS	AB=0.967;AC=10;AF=0.179;AN=56;BaseQRankSum=2.345;DP=606;FS=0.000;HRun=0;HaplotypeScore=110.6849;InbreedingCoeff=0.0439;MQ=66.09;MQ0=11;MQRankSum=-3.945;QD=1.91;ReadPosRankSum=-2.058;VQSLOD=1.9069;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:30,1:31:24.13:24,0,73	1/1:9,0:6:14.59:86,15,0	0/0:25,0:16:11.49:0,11,363	0/0:28,0:23:44.80:0,45,530	0/1:33,1:34:43.24:43,0,170	0/0:32,0:32:95.44:0,95,1436	0/0:17,0:17:27.07:0,27,307	0/1:25,0:23:11.61:12,0,221	0/0:13,0:13:39.07:0,39,602	0/0:23,0:23:69.18:0,69,1044	0/0:23,0:23:41.92:0,42,869	0/0:22,0:22:42:0,42,434	0/0:15,0:15:27.03:0,27,282	0/0:15,0:14:18.04:0,18,228	0/0:23,0:23:69.20:0,69,1165	0/0:18,0:18:53.16:0,53,842	0/1:15,0:16:28.69:97,0,29	0/0:17,0:14:42.03:0,42,656	0/1:18,0:16:1.80:2,0,73	0/0:24,0:20:18.75:0,19,144	0/1:22,2:22:37.93:89,0,38	0/0:29,0:29:68.86:0,69,724	0/0:18,0:18:23.35:0,23,231	0/0:17,0:17:45.09:0,45,570	0/0:27,0:25:74.90:0,75,1063	0/1:24,0:22:83.21:117,0,83	0/1:25,2:27:78.04:78,0,95	0/0:7,0:7:1.89:0,2,5
chr10	44670828	.	CT	C	3070.02	PASS	AB=0.983;AC=20;AF=0.357;AN=56;BaseQRankSum=4.226;DP=604;FS=4.856;HRun=6;HaplotypeScore=93.5888;InbreedingCoeff=0.8175;MQ=65.88;MQ0=11;MQRankSum=-3.322;QD=12.33;ReadPosRankSum=3.881;VQSLOD=2.2113;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,26:31:24.61:438,25,0	1/1:12,0:6:12.47:54,12,0	0/0:25,0:16:5.46:0,5,218	0/1:27,1:23:9.21:9,0,210	1/1:15,21:36:58.19:622,58,0	0/0:32,0:32:76.89:0,77,906	0/0:16,0:17:26.77:0,27,205	0/0:24,0:22:28.83:0,29,170	0/0:13,0:13:39.07:0,39,440	0/0:25,0:25:66.16:0,66,749	0/0:22,0:22:52.29:0,52,566	0/0:23,0:23:41.85:0,42,348	0/0:14,0:14:23.92:0,24,188	0/0:14,0:13:14.97:0,15,130	0/0:23,0:23:63.15:0,63,755	0/0:18,0:18:49.01:0,49,572	0/1:13,0:16:19.85:65,0,20	0/0:17,0:14:36.07:0,36,424	1/1:4,14:16:38.92:385,39,0	1/1:7,17:20:24.05:256,24,0	1/1:11,13:22:35.42:400,35,0	0/0:29,0:29:59.94:0,60,536	0/0:15,0:15:23.05:0,23,172	0/0:16,0:16:41.97:0,42,393	0/0:28,0:26:57.62:0,58,663	1/1:11,13:22:10.78:456,11,0	1/1:5,22:27:47.67:468,48,0	1/1:0,7:7:12.03:127,12,0
chr10	44671612	.	TAGCATGA	T	499.85	PASS	AB=0.750;AC=1;AF=0.019;AN=54;BaseQRankSum=4.457;DP=794;FS=8.199;HRun=0;HaplotypeScore=134.9155;InbreedingCoeff=0.0724;MQ=41.87;MQ0=125;MQRankSum=-3.865;QD=16.66;ReadPosRankSum=-0.258;VQSLOD=1.9297;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:66,0:61:99:0,117,4849	./.	0/0:23,0:1:2.22:0,2,7	0/0:27,0:1:3.01:0,3,95	0/0:31,0:27:54.19:0,54,2210	0/0:25,0:24:57.20:0,57,2365	0/0:20,0:18:45.15:0,45,1856	0/0:29,0:26:78.27:0,78,3038	0/0:37,0:36:93.32:0,93,3896	0/0:28,0:21:63.22:0,63,2443	0/0:19,0:11:12.04:0,12,486	0/0:42,0:42:93.32:0,93,3833	0/0:28,0:28:66.23:0,66,2751	0/0:24,0:23:39.13:0,39,1584	0/0:29,0:26:33.11:0,33,1356	0/0:32,0:31:42.14:0,42,1753	0/1:20,10:21:99:574,0,844	0/0:16,0:10:9.01:0,9,271	0/0:19,0:16:45.11:0,45,1699	0/0:25,0:20:45.15:0,45,1853	0/0:35,0:30:60.21:0,60,2491	0/0:36,0:31:66.23:0,66,2743	0/0:21,0:19:35.60:0,36,1496	0/0:34,0:28:54.19:0,54,2233	0/0:16,0:13:15.04:0,15,619	0/0:36,0:32:96.33:0,96,3856	0/0:49,0:45:99:0,117,4850	0/0:10,0:6:12.04:0,12,503
chr10	44672200	.	A	AT	1297.15	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.486;DP=589;FS=4.232;HRun=3;HaplotypeScore=115.4636;InbreedingCoeff=0.9940;MQ=66.63;MQ0=9;MQRankSum=-1.355;QD=30.88;ReadPosRankSum=0.755;VQSLOD=2.8691;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,1:19:51.09:0,51,599	1/1:1,10:8:21.07:302,21,0	0/0:21,0:18:35.98:0,36,385	0/0:18,0:17:40.50:0,40,414	0/0:33,0:32:96.27:0,96,1173	0/0:35,0:33:99:0,102,1247	0/0:15,0:15:42.13:0,42,520	0/0:28,0:28:75.19:0,75,913	0/0:23,0:23:66.19:0,66,806	0/0:22,0:22:63.19:0,63,770	0/0:23,0:23:66.21:0,66,814	0/0:18,0:18:51.16:0,51,631	0/0:16,0:16:42.13:0,42,520	0/0:19,0:19:45.14:0,45,555	0/0:21,0:21:51.16:0,51,631	0/0:11,0:11:27.08:0,27,332	1/1:0,30:30:78.26:1116,78,0	0/0:13,0:13:39.11:0,39,470	0/0:21,0:21:57.18:0,57,706	0/0:21,0:16:48.15:0,48,589	0/0:17,0:17:48.15:0,48,595	0/0:19,0:19:57.18:0,57,707	0/0:34,0:34:99:0,102,1251	0/0:9,0:9:24.08:0,24,298	0/0:16,0:16:39.12:0,39,483	0/0:28,0:27:78.25:0,78,966	0/0:33,0:33:84.26:0,84,1037	0/0:12,0:12:20.99:0,21,215
chr10	44672209	.	T	TC	13015.35	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-9.277;DP=594;FS=3.026;HRun=5;HaplotypeScore=77.6094;InbreedingCoeff=0.9936;MQ=70.46;MQ0=11;MQRankSum=1.670;QD=32.62;ReadPosRankSum=4.614;VQSLOD=5.3297;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,19:19:45.15:592,45,0	0/0:12,0:8:21.05:0,21,225	0/0:35,0:29:35.65:0,36,354	0/0:15,0:11:18.12:0,18,194	1/1:1,31:30:90.27:1161,90,0	0/0:35,0:33:99:0,99,1037	0/0:17,0:17:48.09:0,48,499	0/0:23,0:23:63.01:0,63,634	0/0:24,0:24:69.15:0,69,727	1/1:1,20:21:60.15:755,60,0	1/1:0,22:22:66.16:848,66,0	1/1:2,17:19:45.15:592,45,0	1/1:0,17:17:48.16:631,48,0	1/1:2,19:21:45.15:592,45,0	1/1:4,16:20:42.14:552,42,0	1/1:0,9:9:24.08:315,24,0	0/0:34,0:33:90.11:0,90,929	1/1:2,13:15:36.12:474,36,0	1/1:2,16:18:48.10:574,48,0	1/1:1,20:16:48.08:595,48,0	1/1:2,15:17:39.13:513,39,0	1/1:2,15:17:45.08:569,45,0	1/1:1,31:32:93.30:1223,93,0	1/1:3,7:10:18.06:234,18,0	1/1:0,16:16:45.06:569,45,0	1/1:0,27:26:78.24:1010,78,0	1/1:6,30:37:78.25:1020,78,0	1/1:0,9:9:15.05:197,15,0
chr10	44672619	.	T	TC	320.70	PASS	AC=12;AF=0.240;AN=50;BaseQRankSum=4.635;DP=458;FS=2.836;HRun=0;HaplotypeScore=63.2871;InbreedingCoeff=0.7588;MQ=75.81;MQ0=34;MQRankSum=-5.599;QD=6.05;ReadPosRankSum=1.810;VQSLOD=2.8163;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	1/1:0,8:3:9.03:143,9,0	0/0:24,0:23:67.76:0,68,900	0/0:13,1:13:32.71:0,33,427	1/1:2,13:5:3.01:48,3,0	0/0:17,0:17:48.16:0,48,671	0/0:24,0:24:72.24:0,72,1005	0/0:33,0:33:93.30:0,93,1286	0/0:20,0:20:60.19:0,60,821	0/0:29,0:28:84.28:0,84,1175	0/0:18,0:18:54.18:0,54,755	0/0:19,0:19:57.19:0,57,797	0/0:17,0:17:6.77:0,7,626	0/0:20,0:20:60.20:0,60,838	0/0:23,0:23:69.22:0,69,948	0/0:27,0:27:81.26:0,81,1116	1/1:0,3:3:9.03:142,9,0	0/0:16,0:16:39.08:0,39,524	1/1:0,7:1:3.01:48,3,0	1/1:3,13:2:3.01:37,3,0	./.	0/0:23,0:23:66.14:0,66,881	0/0:22,3:22:60.15:0,60,801	0/0:16,0:16:48.14:0,48,653	0/0:22,0:22:66.22:0,66,920	0/0:3,8:2:3.01:0,3,42	1/1:0,4:1:3.01:48,3,0	./.
chr10	44672648	.	CT	C	5176.57	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=6.604;DP=550;FS=1.700;HRun=2;HaplotypeScore=55.8466;InbreedingCoeff=0.9479;MQ=61.77;MQ0=42;MQRankSum=2.262;QD=35.70;ReadPosRankSum=4.101;VQSLOD=5.1837;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:7:17.95:0,18,211	0/0:11,0:7:21.07:0,21,314	0/0:27,0:18:51.58:0,52,696	0/0:18,0:13:27.11:0,27,492	0/0:18,0:11:27.07:0,27,366	0/0:24,0:24:69.23:0,69,1034	0/0:22,0:22:66.20:0,66,939	0/0:23,0:23:66.21:0,66,967	0/0:23,0:23:69.23:0,69,1029	1/1:2,31:31:93.27:1168,93,0	1/1:0,15:15:42.14:544,42,0	0/0:23,0:22:63.21:0,63,944	0/0:30,0:26:78.25:0,78,1134	0/0:29,0:28:84.27:0,84,1233	1/1:0,30:30:81.26:1052,81,0	1/1:1,33:34:89.91:1168,90,0	0/0:15,0:14:33.03:0,33,442	1/1:0,16:16:44.76:583,45,0	0/0:7,0:2:6.02:0,6,90	0/0:18,0:9:27.09:0,27,403	0/0:9,0:4:12.04:0,12,179	0/0:23,0:20:60.14:0,60,801	0/0:21,0:18:51.15:0,51,725	0/0:20,0:20:60.20:0,60,898	1/1:0,17:17:51.17:662,51,0	0/0:14,0:6:18.06:0,18,269	0/0:16,0:10:27.05:0,27,376	0/0:2,0:2:6.02:0,6,90
chr10	44673076	.	AC	A	990.76	PASS	AB=0.799;AC=4;AF=0.071;AN=56;BaseQRankSum=7.204;DP=879;FS=1.354;HRun=4;HaplotypeScore=100.2350;InbreedingCoeff=0.3086;MQ=52.93;MQ0=54;MQRankSum=2.260;QD=11.66;ReadPosRankSum=-0.282;VQSLOD=1.4177;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,141,1917	1/1:4,14:15:1.05:427,1,0	0/0:36,0:15:30.73:0,31,457	0/1:24,0:13:2.49:2,0,347	0/0:37,0:32:69.23:0,69,963	0/0:21,0:19:54.18:0,54,755	0/0:25,0:23:66.22:0,66,924	0/0:35,0:31:87.29:0,87,1214	0/0:29,0:28:78.25:0,78,1074	0/0:46,0:42:99:0,123,1672	0/0:21,0:17:50.87:0,51,658	0/0:33,0:29:81.18:0,81,1056	0/0:25,0:23:66.20:0,66,906	0/0:37,0:33:96.30:0,96,1309	0/0:27,0:26:78.25:0,78,1071	0/0:18,0:18:51.17:0,51,714	0/1:18,24:38:99:653,0,392	0/0:28,0:27:72.23:0,72,989	0/0:26,0:21:51.12:0,51,648	0/0:25,0:20:57.10:0,57,771	0/0:59,0:58:99:0,159,2082	0/0:31,0:28:66.22:0,66,922	0/0:28,0:24:60.15:0,60,815	0/0:47,0:45:99:0,126,1668	0/0:32,0:27:78.16:0,78,1050	0/0:38,0:34:99:0,99,1384	0/0:28,0:28:78.26:0,78,1091	0/0:8,0:7:18.06:0,18,252
chr10	44673178	.	G	GC	3031.25	PASS	AB=0.820;AC=16;AF=0.286;AN=56;BaseQRankSum=9.516;DP=910;FS=4.883;HRun=4;HaplotypeScore=113.6182;InbreedingCoeff=-0.0659;MQ=57.93;MQ0=34;MQRankSum=-5.562;QD=6.20;ReadPosRankSum=1.485;VQSLOD=0.1368;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:54,8:58:24.52:0,25,1429	1/1:0,16:15:33.11:450,33,0	0/0:21,0:11:0.75:0,1,183	0/0:28,0:20:14.55:0,15,405	0/1:23,5:26:32.51:33,0,594	0/1:22,7:23:12.69:13,0,628	0/1:28,11:34:72.92:73,0,763	0/0:38,0:36:35.57:0,36,984	0/0:18,7:19:51.15:0,51,579	0/1:26,7:28:9.48:9,0,677	0/1:13,1:14:4.79:5,0,328	0/1:19,15:27:99:258,0,441	0/0:26,7:29:31.14:0,31,730	0/1:26,6:28:2.01:2,0,735	0/0:28,4:28:40.19:0,40,844	0/0:23,6:25:22.13:0,22,629	1/1:8,59:62:99:1803,132,0	0/0:29,4:31:8.23:0,8,848	0/1:28,7:33:82.19:82,0,687	0/0:24,4:25:22.14:0,22,639	0/1:47,8:53:99:157,0,1217	0/1:18,11:25:99:155,0,478	0/0:15,4:16:0.70:0,1,400	0/1:38,9:45:90.65:91,0,1084	0/0:18,3:17:25.25:0,25,498	0/1:25,6:28:62.12:62,0,632	0/0:31,5:33:17.47:0,17,973	0/0:13,3:13:33.09:0,33,374
chr10	44673483	.	C	CCT	3724.47	PASS	AB=0.747;AC=8;AF=0.143;AN=56;BaseQRankSum=11.203;DP=878;FS=16.203;HRun=0;HaplotypeScore=181.0625;InbreedingCoeff=-0.1379;MQ=63.86;MQ0=13;MQRankSum=-11.113;QD=18.53;ReadPosRankSum=-0.920;VQSLOD=2.7290;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:22,12:28:99:471,0,213	0/0:18,0:10:30.10:0,30,458	0/0:40,0:39:69.84:0,70,1423	0/0:37,0:34:96.27:0,96,1408	0/1:10,12:16:15.65:328,0,16	0/0:31,0:30:87.28:0,87,1310	0/0:38,0:38:90.25:0,90,1273	0/0:47,0:46:99:0,126,1839	0/0:29,0:28:75.25:0,75,1123	0/0:33,0:28:81.27:0,81,1233	0/0:29,0:19:48.14:0,48,709	0/0:22,0:21:45.14:0,45,668	0/0:18,0:18:54.18:0,54,827	0/0:34,0:34:96.27:0,96,1417	0/0:28,0:28:72.24:0,72,1091	0/0:46,0:45:99:0,111,1664	0/0:66,0:63:99:0,150,2256	0/0:31,0:31:84.20:0,84,1209	0/1:23,6:25:99:393,0,381	0/1:12,4:10:60.77:282,0,61	0/1:17,7:24:99:369,0,238	0/0:33,0:28:78.22:0,78,1166	0/0:29,0:26:72.24:0,72,1095	0/0:35,0:35:99:0,102,1497	0/0:33,0:24:72.24:0,72,1099	0/1:25,14:35:99:902,0,250	0/1:10,21:30:10.47:903,0,10	0/1:5,1:4:33.91:77,0,34
chr10	44673485	.	A	AAC	1353.98	PASS	AB=0.722;AC=8;AF=0.143;AN=56;BaseQRankSum=11.835;DP=857;FS=14.866;HRun=0;HaplotypeScore=180.4257;InbreedingCoeff=-0.1651;MQ=64.38;MQ0=13;MQRankSum=-10.757;QD=7.61;ReadPosRankSum=2.361;VQSLOD=2.0285;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:21,12:27:99:211,0,378	0/0:18,0:10:30.10:0,30,489	0/0:40,0:39:99:0,110,1652	0/0:36,0:33:99:0,99,1602	0/1:8,11:15:25.08:135,0,25	0/0:31,0:30:87.28:0,87,1393	0/0:37,0:37:90.27:0,90,1410	0/0:50,0:49:99:0,132,2069	0/0:28,0:27:78.22:0,78,1238	0/0:34,0:29:84.28:0,84,1345	0/0:29,0:20:48.14:0,48,753	0/0:21,0:20:48.16:0,48,774	0/0:18,0:18:54.18:0,54,881	0/0:35,0:35:96.31:0,96,1536	0/0:28,0:28:72.24:0,72,1160	0/0:46,0:45:99:0,114,1829	0/0:66,0:63:99:0,151,2421	0/0:31,0:31:84.26:0,84,1341	0/1:19,6:23:99:109,0,427	0/1:10,4:8:78.99:81,0,79	0/1:13,7:20:99:140,0,301	0/0:33,0:28:81.23:0,81,1287	0/0:30,0:27:72.23:0,72,1148	0/0:35,0:35:99:0,102,1617	0/0:33,0:24:72.25:0,72,1172	0/1:21,14:32:99:340,0,360	0/1:6,21:26:27.59:455,0,28	0/1:3,1:2:19.86:20,0,43
chr10	44673486	.	T	TCA	3198.27	PASS	AB=0.740;AC=8;AF=0.143;AN=56;BaseQRankSum=11.694;DP=866;FS=10.044;HRun=0;HaplotypeScore=181.7420;InbreedingCoeff=-0.1618;MQ=63.86;MQ0=13;MQRankSum=-10.662;QD=16.49;ReadPosRankSum=-0.546;VQSLOD=2.5631;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:25,12:31:99:456,0,365	0/0:18,0:10:30.10:0,30,489	0/0:39,0:38:99:0,111,1682	0/0:36,0:33:99:0,99,1608	0/1:8,11:15:18.91:280,0,19	0/0:32,0:31:87.30:0,87,1413	0/0:36,0:36:93.30:0,93,1480	0/0:48,0:47:99:0,135,2131	0/0:27,0:26:75.26:0,75,1220	0/0:33,0:28:84.28:0,84,1347	0/0:30,0:21:51.16:0,51,792	0/0:20,0:19:48.16:0,48,776	0/0:18,0:18:54.18:0,54,878	0/0:34,0:34:96.31:0,96,1537	0/0:28,0:28:72.24:0,72,1160	0/0:45,0:44:99:0,111,1807	0/0:67,0:64:99:0,151,2421	0/0:29,0:29:81.28:0,81,1321	0/1:22,6:25:99:359,0,428	0/1:14,4:12:64.76:294,0,65	0/1:16,7:23:99:365,0,243	0/0:34,0:29:81.28:0,81,1305	0/0:30,0:27:72.23:0,72,1149	0/0:35,0:35:99:0,99,1549	0/0:33,0:24:72.25:0,72,1172	0/1:22,14:33:99:668,0,349	0/1:7,21:27:22.51:878,0,23	0/1:4,1:3:36.08:36,0,43
chr10	44673911	.	C	CTT	5753.12	PASS	AB=0.610;AC=27;AF=0.500;AN=54;BaseQRankSum=-4.282;DP=688;FS=0.327;HRun=9;HaplotypeScore=114.0711;InbreedingCoeff=0.7971;MQ=60.87;MQ0=31;MQRankSum=-2.649;QD=15.18;ReadPosRankSum=-0.241;VQSLOD=2.7424;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,0:46:60.91:276,61,0	1/1:5,0:5:4.42:16,4,0	0/0:16,0:14:32.74:0,33,309	0/0:13,0:9:21:0,21,211	1/1:8,1:26:16.37:175,16,0	0/0:18,0:18:51.13:0,51,543	0/0:32,0:32:75.13:0,75,788	0/0:26,0:26:69.10:0,69,711	0/0:30,0:30:63.20:0,63,709	1/1:5,26:31:75.19:1065,75,0	1/1:4,10:14:31.29:352,31,0	0/0:24,0:24:43.07:0,43,141	0/0:25,0:25:35.21:0,35,144	0/0:32,0:31:35.69:0,36,120	1/1:7,25:29:60.20:924,60,0	0/1:6,19:24:0.66:791,0,1	./.	1/1:1,13:13:27.09:411,27,0	1/1:6,0:19:33.44:143,33,0	1/1:11,0:27:53.26:226,53,0	1/1:5,0:30:64.75:222,65,0	0/0:22,0:22:40.20:0,40,190	0/0:26,0:26:45.23:0,45,158	0/0:31,0:31:61.60:0,62,305	1/1:2,20:25:60.17:864,60,0	1/1:3,1:20:14.03:151,14,0	0/1:7,0:30:10.07:123,0,10	0/1:4,0:7:14.27:14,0,22
chr10	44673920	.	T	TG	5825.93	PASS	AB=1.000;AC=22;AF=0.393;AN=56;BaseQRankSum=-2.491;DP=686;FS=5.200;HRun=1;HaplotypeScore=98.8448;InbreedingCoeff=0.3641;MQ=64.46;MQ0=32;MQRankSum=-0.774;QD=14.79;ReadPosRankSum=5.021;VQSLOD=4.7363;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:50,0:43:13.75:218,0,14	1/1:10,0:4:7.30:34,7,0	0/0:15,0:15:38.82:0,39,359	0/0:17,0:14:10.21:0,10,215	0/1:23,0:23:68.66:85,0,69	0/0:20,0:20:60.17:0,60,736	0/0:28,0:28:81.24:0,81,1015	0/0:25,0:25:72.21:0,72,884	0/0:28,0:28:74.47:0,74,961	0/0:34,0:30:76.37:0,76,487	0/0:18,0:17:17.83:0,18,113	1/1:0,27:27:63.21:871,63,0	1/1:2,24:26:48.05:640,48,0	1/1:3,25:27:60.20:825,60,0	0/0:28,0:24:56.59:0,57,265	0/0:23,0:22:49.20:0,49,294	0/0:14,0:6:3:0,3,27	0/0:14,0:12:30.51:0,31,156	0/1:23,0:20:25.89:26,0,143	0/1:28,0:26:56.16:138,0,56	0/1:33,0:32:25.99:145,0,26	1/1:1,24:25:56.44:737,56,0	1/1:0,31:31:71.84:997,72,0	1/1:10,21:31:72.88:944,73,0	0/0:27,0:27:56.61:0,57,254	0/1:22,0:22:58.57:59,0,81	0/1:31,0:30:89.43:89,0,140	0/1:6,0:6:18.48:18,0,65
chr10	44675321	.	C	CA	11768.27	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=8.100;DP=513;FS=7.731;HRun=4;HaplotypeScore=78.2711;InbreedingCoeff=0.9294;MQ=67.23;MQ0=10;MQRankSum=1.980;QD=31.72;ReadPosRankSum=8.100;VQSLOD=4.0545;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,25:29:63.21:855,63,0	1/1:1,7:2:3.01:41,3,0	0/0:20,0:19:46.67:0,47,507	0/0:21,0:20:57.12:0,57,612	1/1:2,17:18:48.16:650,48,0	0/0:21,0:21:60.17:0,60,680	0/0:23,0:23:57.16:0,57,646	0/0:34,0:34:99:0,99,1107	0/0:23,0:23:69.20:0,69,782	1/1:1,23:23:69.23:942,69,0	1/1:2,19:21:54.18:739,54,0	1/1:0,13:11:30.10:410,30,0	1/1:1,16:17:45.15:615,45,0	1/1:0,11:9:21.07:287,21,0	1/1:1,18:18:42.14:574,42,0	1/1:1,15:15:39.13:534,39,0	1/1:2,4:2:3.01:33,3,0	1/1:1,19:19:48.16:656,48,0	1/1:1,16:16:45.15:616,45,0	1/1:1,17:16:42.14:574,42,0	1/1:4,11:14:30.10:410,30,0	1/1:3,16:17:42.14:574,42,0	1/1:2,17:18:48.16:655,48,0	1/1:0,11:11:33.11:451,33,0	1/1:1,8:7:18.06:246,18,0	1/1:2,18:20:57.16:760,57,0	1/1:3,20:20:39.13:529,39,0	1/1:0,16:15:45.15:615,45,0
chr10	44675893	.	C	CA	6626.18	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=13.909;DP=590;FS=4.765;HRun=1;HaplotypeScore=64.7198;InbreedingCoeff=0.9819;MQ=68.58;MQ0=31;MQRankSum=-3.140;QD=36.21;ReadPosRankSum=5.849;VQSLOD=4.9052;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,21:16:39.13:623,39,0	1/1:0,18:16:48.16:765,48,0	0/0:28,0:26:64.72:0,65,976	0/0:26,0:27:78.25:0,78,1060	1/1:0,28:22:60.20:958,60,0	0/0:16,0:14:42.14:0,42,581	0/0:22,0:17:48.16:0,48,671	0/0:29,0:26:78.25:0,78,1069	0/0:17,0:11:33.11:0,33,453	0/0:29,0:25:69.23:0,69,965	0/0:21,5:21:39.13:0,39,545	0/0:17,0:14:42.13:0,42,569	0/0:25,0:22:66.21:0,66,903	0/0:19,0:15:45.15:0,45,629	0/0:19,0:16:42.13:0,42,569	0/0:27,0:21:63.21:0,63,877	1/1:0,22:19:45.15:719,45,0	0/0:20,0:19:54.18:0,54,746	1/1:0,7:5:15.03:216,15,0	1/1:0,22:17:42.14:670,42,0	1/1:0,16:16:45.15:719,45,0	0/0:19,0:19:51.17:0,51,711	0/0:25,3:25:63.21:0,63,875	0/0:14,0:13:39.07:0,39,506	0/0:24,1:24:69.23:0,69,958	1/1:0,20:19:57.19:910,57,0	1/1:0,23:21:60.20:951,60,0	1/1:0,5:2:6.02:96,6,0
chr10	44676239	.	AT	A	637.89	PASS	AB=0.753;AC=9;AF=0.161;AN=56;BaseQRankSum=9.041;DP=681;FS=6.641;HRun=8;HaplotypeScore=200.4501;InbreedingCoeff=-0.1950;MQ=45.66;MQ0=15;MQRankSum=-8.325;QD=2.50;ReadPosRankSum=2.425;VQSLOD=-0.3017;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,2:31:84.24:0,84,999	0/1:13,6:15:70.67:71,0,331	0/0:22,0:19:57.13:0,57,627	0/0:15,1:15:15.85:0,16,411	0/1:18,13:19:70.61:71,0,335	0/0:30,0:28:69.14:0,69,800	0/0:40,0:30:57.13:0,57,672	0/0:43,0:35:87.26:0,87,1040	0/0:34,0:24:63.19:0,63,758	0/0:21,6:20:45.13:0,45,531	0/1:20,16:24:70.58:71,0,351	0/0:20,1:19:13.14:0,13,424	0/0:13,1:13:4.15:0,4,330	0/1:14,2:10:1.89:2,0,246	0/0:12,0:11:33.10:0,33,398	0/0:6,0:5:15.01:0,15,166	0/0:29,3:31:75.23:0,75,902	0/0:13,0:13:30.09:0,30,362	0/0:19,2:16:16.18:0,16,478	0/1:25,13:29:99:162,0,423	0/0:18,0:18:51.13:0,51,601	0/1:21,11:21:29.14:29,0,417	0/1:19,5:19:38.74:39,0,387	0/0:11,0:9:18.05:0,18,215	0/1:14,18:28:99:316,0,295	0/1:19,8:23:12.77:13,0,423	0/0:16,1:16:45.10:0,45,525	0/0:13,1:13:7.15:0,7,370
chr10	44677238	.	A	AT	830.35	PASS	AC=28;AF=0.875;AN=32;BaseQRankSum=-2.840;DP=156;FS=0.000;HRun=0;HaplotypeScore=23.1771;InbreedingCoeff=0.2265;MQ=14.00;MQ0=108;MQRankSum=0.568;QD=12.03;ReadPosRankSum=0.100;VQSLOD=3.3752;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,1:1:3.01:33,3,0	0/0:1,0:1:2.50:0,2,9	./.	./.	./.	1/1:5,2:1:3.01:34,3,0	./.	1/1:7,1:1:3.01:48,3,0	1/1:0,5:3:9.03:102,9,0	./.	1/1:1,1:1:3.01:33,3,0	1/1:4,3:5:3.60:64,4,0	0/0:5,0:1:2.84:0,3,14	1/1:3,4:2:6.02:65,6,0	1/1:0,3:3:9.02:100,9,0	1/1:3,2:2:6.02:68,6,0	1/1:0,2:1:3.01:33,3,0	./.	./.	1/1:1,4:4:11.95:116,12,0	./.	./.	1/1:0,1:1:2.90:16,3,0	./.	1/1:0,1:1:3.01:34,3,0	./.	1/1:4,5:5:15.04:175,15,0	./.
chr10	44677536	.	TG	T	1424.77	PASS	AB=0.829;AC=33;AF=0.717;AN=46;BaseQRankSum=-0.021;DP=493;FS=9.495;HRun=10;HaplotypeScore=75.8017;InbreedingCoeff=-0.0182;MQ=23.56;MQ0=173;MQRankSum=-0.177;QD=3.86;ReadPosRankSum=2.242;VQSLOD=0.0515;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,26:22:8.03:58,8,0	0/1:4,0:3:0.89:1,0,17	./.	./.	./.	0/1:18,7:17:17.01:17,0,57	0/1:17,12:15:80.13:80,0,94	0/1:7,7:8:9.37:89,0,9	0/1:7,10:14:17.95:89,0,18	0/0:21,0:14:5.99:0,6,55	0/1:18,0:11:10.21:10,0,43	1/1:2,8:10:14.99:130,15,0	1/1:9,9:10:11.97:104,12,0	1/1:5,15:14:14.99:129,15,0	0/1:30,0:23:12.52:13,0,96	0/0:12,0:8:2.90:0,3,33	0/1:17,0:11:12.06:13,0,12	1/1:9,0:4:2.90:17,3,0	1/1:4,5:7:14.03:110,14,0	1/1:4,12:3:5.04:32,5,0	./.	1/1:11,11:14:20.99:181,21,0	1/1:5,12:11:14.99:129,15,0	1/1:4,4:6:3:26,3,0	./.	0/1:7,6:10:16.07:93,0,16	1/1:5,9:15:27.57:201,28,0	1/1:1,8:6:9.07:43,9,0
chr10	44677544	.	GGGC	G	433.28	PASS	AB=0.923;AC=10;AF=0.217;AN=46;BaseQRankSum=4.392;DP=446;FS=8.723;HRun=0;HaplotypeScore=77.8215;InbreedingCoeff=-0.2309;MQ=23.23;MQ0=161;MQRankSum=-0.692;QD=2.89;ReadPosRankSum=0.904;VQSLOD=0.8679;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:32,0:22:28.44:28,0,64	0/1:1,2:3:23.91:43,0,24	./.	./.	./.	0/1:23,0:14:3.95:4,0,120	0/0:37,0:22:30.49:0,30,436	0/0:16,0:8:21.04:0,21,241	0/0:17,0:14:15.02:0,15,182	0/0:14,0:4:9.01:0,9,118	0/0:10,0:4:5.51:0,6,51	0/0:10,0:10:15.02:0,15,147	0/0:15,0:9:11.63:0,12,107	0/0:23,0:16:20.52:0,21,153	0/0:21,0:16:26.16:0,26,289	0/0:9,0:6:5.92:0,6,65	0/1:5,7:9:31.62:196,0,32	0/1:9,0:5:3.62:18,0,4	0/1:11,0:7:19.36:19,0,181	0/1:20,0:2:24.39:34,0,24	./.	0/0:20,0:12:20.13:0,20,133	0/0:18,0:9:14.55:0,15,123	0/0:9,0:7:8.85:0,9,64	./.	0/1:11,0:8:19.42:19,0,186	0/1:17,0:15:91.95:92,0,174	0/1:12,0:6:19.11:109,0,19
chr10	44677546	.	GC	G	754.61	PASS	AB=0.975;AC=29;AF=0.630;AN=46;BaseQRankSum=4.265;DP=436;FS=6.065;HRun=2;HaplotypeScore=71.9868;InbreedingCoeff=-0.2585;MQ=23.42;MQ0=157;MQRankSum=-1.715;QD=2.16;ReadPosRankSum=4.008;VQSLOD=-0.6569;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:32,0:22:7.53:19,0,8	0/1:3,0:3:10.23:10,0,13	./.	./.	./.	0/1:21,1:13:13.03:13,0,34	0/1:37,0:22:6.44:6,0,113	0/1:15,0:7:7.01:7,0,32	0/1:18,0:15:27.31:35,0,27	0/0:9,0:1:3:0,3,27	0/1:6,2:4:7.19:32,0,7	1/1:11,0:11:11.98:51,12,0	1/1:15,0:9:9.63:47,10,0	0/1:23,0:16:1.61:61,0,2	0/1:16,3:15:58.66:89,0,59	0/1:10,0:7:10.21:13,0,10	0/1:9,0:6:2.34:67,0,2	1/1:8,1:5:6:62,6,0	0/1:11,0:7:5.80:6,0,32	1/1:20,0:2:4.44:14,4,0	./.	1/1:20,0:12:19.86:144,20,0	1/1:17,1:9:13.49:80,13,0	0/1:9,0:7:0.78:1,0,25	./.	0/1:11,0:8:36.63:37,0,47	0/1:19,0:17:10.11:65,0,10	1/1:11,0:5:8.88:28,9,0
chr10	44677619	.	AAAGAC	A	2627.52	PASS	AB=0.823;AC=16;AF=0.308;AN=52;BaseQRankSum=10.502;DP=758;FS=8.463;HRun=0;HaplotypeScore=143.1492;InbreedingCoeff=-0.0906;MQ=34.71;MQ0=148;MQRankSum=-9.971;QD=8.04;ReadPosRankSum=0.838;VQSLOD=2.0580;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,1:34:72.25:0,72,1963	1/1:3,6:6:18.06:346,18,0	./.	./.	0/0:23,3:18:42.14:0,42,1161	0/0:28,0:25:69.24:0,69,1910	0/0:43,0:34:75.26:0,75,1993	0/0:41,0:27:66.17:0,66,1690	0/0:47,0:44:99:0,102,3007	0/1:32,5:29:90.36:90,0,2250	0/1:17,4:6:48.83:49,0,260	0/1:19,6:23:99:247,0,1155	0/1:19,7:22:99:131,0,1179	0/1:22,4:23:99:243,0,1022	0/1:25,9:33:99:467,0,1290	0/1:16,5:21:99:250,0,1102	1/1:5,7:10:15.01:253,15,0	0/0:23,0:20:42.14:0,42,1198	0/0:11,0:5:15.05:0,15,454	0/1:20,6:12:99:149,0,654	0/0:33,0:21:54.19:0,54,1430	0/0:30,8:25:54.19:0,54,1501	0/0:17,5:10:30.10:0,30,840	0/0:14,1:15:30.10:0,30,756	0/1:10,6:7:99:161,0,342	0/1:16,3:12:88.63:89,0,785	0/1:31,7:35:99:295,0,1359	0/1:14,3:14:21.73:22,0,1051
chr10	44677635	.	GAC	G	3639.58	PASS	AB=0.605;AC=6;AF=0.107;AN=56;BaseQRankSum=4.483;DP=881;FS=0.000;HRun=0;HaplotypeScore=136.5905;InbreedingCoeff=-0.0878;MQ=38.84;MQ0=121;MQRankSum=4.522;QD=20.22;ReadPosRankSum=4.078;VQSLOD=3.5238;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:34:87.30:0,87,1574	0/0:15,0:11:33.11:0,33,553	0/0:51,0:13:39.13:0,39,681	0/0:42,0:14:42.14:0,42,759	0/0:30,0:22:57.20:0,57,1035	0/0:40,0:38:93.32:0,93,1701	0/0:39,0:34:84.29:0,84,1530	0/0:43,0:31:93.32:0,93,1675	0/0:52,0:49:99:0,120,2197	0/0:41,0:34:99:0,99,1759	0/0:21,0:8:21.07:0,21,371	0/1:7,21:26:99:621,0,204	0/1:11,18:26:99:624,0,176	0/1:10,22:29:99:660,0,208	0/0:34,0:34:90.31:0,90,1549	0/0:27,0:27:75.26:0,75,1319	0/0:15,0:14:30.10:0,30,513	0/0:28,0:27:63.12:0,63,1071	0/0:20,0:10:27.09:0,27,491	0/0:27,0:16:39.08:0,39,590	0/0:34,0:26:63.22:0,63,1153	0/1:18,28:32:99:825,0,144	0/1:9,19:16:9.84:556,0,10	0/1:7,10:17:76.36:353,0,76	0/0:21,0:12:36.12:0,36,627	0/0:24,0:18:51.16:0,51,877	0/0:38,0:36:75.02:0,75,1172	0/0:22,0:19:54.18:0,54,961
chr10	44677669	.	C	CA	618.04	PASS	AB=0.683;AC=2;AF=0.036;AN=56;BaseQRankSum=5.300;DP=998;FS=15.755;HRun=3;HaplotypeScore=175.3866;InbreedingCoeff=-0.0371;MQ=66.31;MQ0=5;MQRankSum=-4.570;QD=13.44;ReadPosRankSum=0.042;VQSLOD=1.5480;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:95.61:0,96,1105	0/1:11,14:18:99:432,0,129	0/0:56,0:52:99:0,135,1569	0/0:45,0:38:98.86:0,99,1127	0/0:42,0:33:69.95:0,70,799	0/0:41,0:40:99:0,111,1330	0/0:39,0:39:99:0,102,1223	0/0:51,0:51:99:0,141,1649	0/0:52,0:52:99:0,144,1723	0/0:41,0:37:86.59:0,87,999	0/0:27,0:17:32.92:0,33,366	0/0:31,0:30:45.69:0,46,707	0/0:33,0:32:47.77:0,48,724	0/0:39,0:39:71.60:0,72,834	0/0:45,0:45:67.33:0,67,767	0/0:31,0:30:55.84:0,56,606	0/1:13,8:19:99:275,0,371	0/0:27,0:27:70.61:0,71,816	0/0:31,0:28:55.40:0,55,620	0/0:26,0:17:38:0,38,435	0/0:33,0:33:77.74:0,78,938	0/0:46,0:36:60.38:0,60,723	0/0:28,0:19:43.54:0,44,506	0/0:17,0:17:37.05:0,37,434	0/0:29,0:22:26.72:0,27,264	0/0:36,0:32:59.35:0,59,659	0/0:33,0:32:57.94:0,58,655	0/0:28,0:23:61.13:0,61,722
chr10	44677672	.	AC	A	4629.91	PASS	AB=0.770;AC=19;AF=0.339;AN=56;BaseQRankSum=15.268;DP=990;FS=97.702;HRun=1;HaplotypeScore=154.7900;InbreedingCoeff=-0.5169;MQ=68.17;MQ0=2;MQRankSum=-8.301;QD=7.31;ReadPosRankSum=3.448;VQSLOD=1.0211;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:38,7:45:99:106,0,1433	0/0:25,0:18:48.84:0,49,418	0/0:55,0:53:99:0,141,2179	0/0:42,0:39:99:0,108,1559	0/1:27,15:33:99:262,0,954	0/0:38,0:38:99:0,114,1804	0/0:39,0:39:99:0,108,1660	0/0:51,0:51:99:0,153,2344	0/0:52,0:52:99:0,150,2336	0/1:34,10:38:99:150,0,1233	0/1:17,10:17:99:200,0,441	0/1:20,11:30:99:328,0,866	0/1:22,7:28:99:167,0,932	0/1:25,14:39:99:399,0,985	0/1:23,20:43:99:630,0,935	0/1:21,11:31:99:335,0,725	0/0:22,0:19:58.51:0,59,675	0/1:24,3:27:47.31:47,0,1008	0/1:20,11:29:99:293,0,800	0/1:20,7:18:99:136,0,519	0/0:29,4:33:9.49:0,9,1223	0/1:27,18:37:99:359,0,947	0/1:21,7:18:74.68:75,0,616	0/1:16,3:19:73.39:73,0,547	0/1:14,13:22:99:440,0,327	0/1:21,14:31:99:367,0,838	0/1:23,11:33:99:248,0,854	0/1:22,6:23:17.45:17,0,889
chr10	44677756	.	G	GTTT	8471.19	PASS	AB=0.822;AC=22;AF=0.393;AN=56;BaseQRankSum=9.086;DP=1092;FS=10.920;HRun=1;HaplotypeScore=170.8058;InbreedingCoeff=-0.6468;MQ=56.79;MQ0=5;MQRankSum=-15.669;QD=10.46;ReadPosRankSum=-1.796;VQSLOD=-0.0890;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:53,10:57:99:488,0,1987	0/1:13,7:14:99:250,0,335	0/0:45,0:44:99:0,123,2039	0/0:40,0:39:92.94:0,93,1723	0/1:27,21:33:99:1148,0,610	0/0:32,0:32:84.19:0,84,1366	0/0:47,0:47:99:0,135,2304	0/0:59,0:59:99:0,166,2853	0/0:59,0:59:99:0,172,3011	0/1:27,16:27:99:568,0,671	0/1:22,15:25:99:659,0,460	0/1:24,4:27:99:176,0,1032	0/1:26,2:27:23.36:23,0,1123	0/1:31,7:36:99:312,0,1228	0/1:33,9:40:99:604,0,1257	0/1:30,4:31:99:122,0,1292	0/1:36,11:44:99:452,0,1424	0/1:23,4:25:99:205,0,852	0/1:20,2:22:99:124,0,833	0/1:23,14:28:99:771,0,662	0/1:42,4:46:99:248,0,1778	0/1:47,12:36:99:533,0,1096	0/1:19,6:15:99:282,0,433	0/1:37,7:42:99:376,0,1540	0/1:15,10:23:99:498,0,669	0/1:25,5:21:99:154,0,782	0/1:43,11:48:99:393,0,1680	0/1:9,2:9:85.62:86,0,343
chr10	44677841	.	TA	T	7719.63	PASS	AB=0.719;AC=20;AF=0.385;AN=52;BaseQRankSum=13.009;DP=1308;FS=106.391;HRun=2;HaplotypeScore=143.0209;InbreedingCoeff=-0.6251;MQ=36.50;MQ0=216;MQRankSum=-6.423;QD=7.75;ReadPosRankSum=1.400;VQSLOD=1.1680;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:42,35:58:99:456,0,1125	0/0:15,0:11:27.09:0,27,401	./.	./.	0/1:25,24:32:99:373,0,260	0/0:44,0:37:99:0,99,1481	0/0:52,0:33:57.19:0,57,831	0/0:53,0:25:75.20:0,75,1055	0/0:67,0:56:99:0,123,1822	0/1:38,10:35:99:317,0,824	0/1:26,17:28:99:357,0,461	0/1:32,17:40:99:292,0,888	0/1:28,19:34:99:248,0,510	0/1:37,26:53:99:606,0,950	0/1:38,30:49:99:598,0,556	0/1:31,26:47:99:560,0,571	0/0:49,0:36:81.27:0,81,1192	0/1:27,7:24:99:173,0,555	0/1:30,12:30:99:271,0,643	0/1:27,18:28:99:357,0,382	0/1:34,24:42:99:137,0,952	0/1:28,24:38:99:601,0,565	0/1:25,17:36:99:346,0,617	0/1:31,19:41:99:361,0,868	0/1:21,22:33:99:421,0,567	0/1:31,22:33:99:488,0,645	0/1:35,22:42:99:487,0,567	0/1:11,8:17:99:269,0,228
chr10	44678778	.	G	GC	383.40	PASS	AB=0.733;AC=2;AF=0.036;AN=56;BaseQRankSum=6.735;DP=684;FS=2.120;HRun=3;HaplotypeScore=80.0745;InbreedingCoeff=-0.0373;MQ=63.30;MQ0=2;MQRankSum=-6.690;QD=7.23;ReadPosRankSum=0.248;VQSLOD=0.6211;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,135,1593	0/1:9,4:13:99:150,0,249	0/0:25,0:22:53.67:0,54,586	0/0:33,0:30:85.44:0,85,913	0/0:19,0:19:54.15:0,54,635	0/0:20,0:20:57.15:0,57,663	0/0:25,0:25:72.22:0,72,864	0/0:29,0:28:75.21:0,75,881	0/0:26,0:26:78.21:0,78,912	0/0:28,0:28:75.22:0,75,886	0/0:13,0:13:39.12:0,39,467	0/0:24,0:24:69.20:0,69,814	0/0:20,0:20:57.16:0,57,672	0/0:19,0:19:57.17:0,57,684	0/0:29,0:29:87.23:0,87,1011	0/0:24,0:24:72.22:0,72,864	0/1:23,17:34:99:323,0,670	0/0:16,0:16:45.11:0,45,526	0/0:22,0:21:57.16:0,57,674	0/0:16,0:16:48.15:0,48,576	0/0:61,0:61:99:0,178,2123	0/0:18,0:18:51.16:0,51,612	0/0:12,0:12:36.11:0,36,432	0/0:35,0:35:99:0,105,1222	0/0:17,0:17:48.15:0,48,576	0/0:27,0:27:75.22:0,75,890	0/0:21,0:21:63.19:0,63,756	0/0:6,0:6:18.06:0,18,216
chr10	44679073	.	G	GTA	4553.34	PASS	AB=0.799;AC=16;AF=0.308;AN=52;BaseQRankSum=9.355;DP=446;FS=0.441;HRun=0;HaplotypeScore=67.0416;InbreedingCoeff=0.5891;MQ=65.04;MQ0=1;MQRankSum=-1.402;QD=25.44;ReadPosRankSum=1.857;VQSLOD=5.5820;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:10,16:26:27.52:648,0,28	./.	0/0:7,0:3:3.01:0,3,36	0/1:10,0:8:12.19:12,0,86	1/1:2,9:11:18.06:285,18,0	0/0:27,0:27:78.25:0,78,983	0/0:12,0:12:24.07:0,24,291	0/0:38,0:38:96.28:0,96,1177	0/1:16,1:17:7.65:8,0,437	0/0:22,0:22:54.15:0,54,658	0/0:14,0:14:36.10:0,36,441	0/0:11,0:11:30.10:0,30,378	0/0:18,0:18:45.14:0,45,568	0/0:20,0:20:51.13:0,51,616	0/0:24,0:24:60.18:0,60,744	0/0:12,0:12:36.12:0,36,454	./.	0/0:20,0:19:54.11:0,54,646	1/1:8,13:19:4.25:555,4,0	1/1:8,12:20:33.11:545,33,0	1/1:3,12:15:30.10:499,30,0	0/0:10,0:10:15.03:0,15,175	0/0:5,0:5:12.04:0,12,151	0/0:14,0:14:30.10:0,30,378	0/0:9,0:9:15.05:0,15,189	0/1:8,11:19:61.13:506,0,61	1/1:4,23:27:63.22:1047,63,0	1/1:3,9:12:27.09:448,27,0
chr10	44679230	.	C	CT	483.34	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.215;DP=414;FS=7.144;HRun=8;HaplotypeScore=49.7452;InbreedingCoeff=0.7798;MQ=58.21;MQ0=0;MQRankSum=1.463;QD=21.97;ReadPosRankSum=0.839;VQSLOD=3.6775;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:33:84.57:0,85,741	0/0:4,0:4:5.90:0,6,38	0/0:10,0:8:14.86:0,15,116	0/0:6,0:4:12.01:0,12,110	0/0:31,0:31:83.97:0,84,754	0/0:7,0:7:21.01:0,21,192	0/0:11,0:11:30.02:0,30,275	0/0:22,0:21:54.02:0,54,494	0/0:8,0:8:24.01:0,24,220	0/0:24,0:24:66.03:0,66,602	0/0:22,0:22:47.70:0,48,423	0/0:10,0:10:24.01:0,24,220	0/0:13,0:13:30:0,30,270	0/0:14,0:14:42.02:0,42,384	0/0:13,0:13:36.01:0,36,330	0/0:8,0:8:24.01:0,24,220	1/1:7,15:22:51.14:578,51,0	0/0:11,0:11:27.01:0,27,246	0/0:16,0:15:42.02:0,42,384	0/0:21,0:21:51.02:0,51,467	0/0:8,0:8:24.01:0,24,220	0/0:5,0:5:6:0,6,55	0/0:10,0:10:21.01:0,21,192	0/0:14,0:14:36.02:0,36,330	0/0:15,0:15:42:0,42,379	0/0:20,0:20:51.02:0,51,467	0/0:23,0:23:56.98:0,57,511	0/0:13,0:13:36.02:0,36,330
chr10	44679490	.	AG	A	1461.07	PASS	AB=0.548;AC=11;AF=0.204;AN=54;BaseQRankSum=8.438;DP=597;FS=2.899;HRun=3;HaplotypeScore=48.0085;InbreedingCoeff=0.8474;MQ=52.04;MQ0=59;MQRankSum=-5.457;QD=16.99;ReadPosRankSum=-0.920;VQSLOD=3.0490;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:47:96.31:0,96,1351	./.	0/0:44,0:11:28.33:0,28,364	0/0:60,0:7:14.22:0,14,207	0/0:22,0:20:42.14:0,42,604	0/0:14,0:13:30.10:0,30,432	0/0:13,0:11:21.07:0,21,302	0/0:19,0:10:30.10:0,30,428	0/0:23,0:22:63.21:0,63,907	0/0:20,0:18:51.17:0,51,733	0/0:15,0:14:36.12:0,36,518	1/1:0,11:11:24.08:297,24,0	1/1:1,18:18:32.79:407,33,0	0/1:3,14:15:13:304,0,13	0/0:28,0:28:57.15:0,57,797	0/0:23,0:23:57.19:0,57,805	0/0:12,0:11:6.02:0,6,86	0/0:19,0:19:35.99:0,36,495	0/0:18,0:12:33.10:0,33,456	0/0:27,0:25:63.18:0,63,864	0/0:36,0:33:66.19:0,66,923	1/1:0,13:13:24.08:297,24,0	1/1:1,10:8:9.03:111,9,0	1/1:2,13:14:18.06:217,18,0	0/0:11,0:10:30.09:0,30,415	0/0:18,0:17:45.15:0,45,648	0/0:27,0:26:69.23:0,69,988	0/0:7,0:6:18.06:0,18,259
chr10	44680570	.	AT	A	621.10	PASS	AC=4;AF=0.074;AN=54;BaseQRankSum=2.749;DP=560;FS=4.083;HRun=6;HaplotypeScore=60.6622;InbreedingCoeff=0.9060;MQ=49.56;MQ0=35;MQRankSum=-0.887;QD=22.18;ReadPosRankSum=0.974;VQSLOD=2.9180;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:25:57.18:0,57,746	1/1:0,12:12:24.06:258,24,0	0/0:8,0:1:3:0,3,27	./.	0/0:34,0:30:66.21:0,66,860	0/0:22,0:22:51.17:0,51,671	0/0:23,0:23:45.15:0,45,589	0/0:28,0:9:15.05:0,15,197	0/0:14,0:14:30.08:0,30,380	0/0:27,0:26:71.78:0,72,947	0/0:30,0:30:54.03:0,54,650	0/0:16,0:14:36.12:0,36,473	0/0:21,0:21:57.18:0,57,746	0/0:14,0:14:33.08:0,33,434	0/0:22,0:20:48.16:0,48,632	0/0:12,0:10:24.08:0,24,315	1/1:0,16:15:45.11:483,45,0	0/0:16,0:16:39.13:0,39,513	0/0:21,0:12:36.10:0,36,448	0/0:33,0:31:69.17:0,69,871	0/0:14,0:11:27.07:0,27,340	0/0:21,0:21:42.14:0,42,550	0/0:17,0:17:45.13:0,45,577	0/0:16,0:16:42.08:0,42,519	0/0:13,0:13:27.08:0,27,339	0/0:26,0:25:72.21:0,72,921	0/0:29,0:29:63.17:0,63,798	0/0:19,0:19:39.09:0,39,485
chr10	44680807	.	TTTC	T	1482.85	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=10.761;DP=606;FS=23.239;HRun=0;HaplotypeScore=101.2551;InbreedingCoeff=0.9596;MQ=52.26;MQ0=13;MQRankSum=-10.501;QD=20.89;ReadPosRankSum=2.092;VQSLOD=1.8681;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:33:78.27:0,78,1839	0/0:9,0:4:9.03:0,9,213	0/0:33,0:25:69.21:0,69,1527	0/0:22,0:19:54.18:0,54,1138	0/0:40,0:38:99:0,111,2568	0/0:39,0:39:99:0,99,2337	0/0:16,0:15:42.10:0,42,941	0/0:34,0:29:84.29:0,84,1986	0/0:27,0:27:63.22:0,63,1486	1/1:5,14:15:31.98:422,32,0	1/1:2,12:10:23.56:264,24,0	0/0:11,0:10:21.07:0,21,483	0/0:25,0:24:60.21:0,60,1391	0/0:17,0:17:36.12:0,36,850	1/1:3,7:7:18.06:220,18,0	1/1:1,15:14:39.12:478,39,0	0/0:9,0:4:9.03:0,9,212	1/1:4,2:5:9.48:99,9,0	0/0:29,0:27:81.28:0,81,1909	0/0:35,0:35:99:0,102,2362	0/0:19,0:19:54.19:0,54,1276	0/0:27,0:27:72.25:0,72,1673	0/0:19,0:18:42.14:0,42,992	0/0:18,0:18:45.11:0,45,1013	1/1:0,6:5:15.05:182,15,0	0/0:27,0:26:78.25:0,78,1784	0/0:27,0:27:72.01:0,72,1642	0/0:18,0:18:54.19:0,54,1277
chr10	44680813	.	CAAGTGTT	C	3007.96	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=11.036;DP=597;FS=27.160;HRun=0;HaplotypeScore=138.6956;InbreedingCoeff=0.9483;MQ=54.17;MQ0=5;MQRankSum=-9.812;QD=49.31;ReadPosRankSum=2.449;VQSLOD=1.9702;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:81.28:0,81,3162	0/0:9,0:4:9.03:0,9,374	0/0:36,0:26:75.26:0,75,2974	0/0:23,0:19:57.20:0,57,2024	0/0:42,0:40:99:0,111,4486	0/0:39,0:39:99:0,102,4130	0/0:16,0:15:42.14:0,42,1758	0/0:33,0:31:90.31:0,90,3728	0/0:28,0:28:72.25:0,72,2694	1/1:1,14:11:33.11:766,33,0	1/1:1,12:10:27.09:587,27,0	0/0:9,0:9:18.06:0,18,751	0/0:24,0:24:60.21:0,60,2367	0/0:17,0:17:39.13:0,39,1482	1/1:1,7:6:18.06:406,18,0	1/1:2,15:15:42.14:956,42,0	0/0:9,0:4:8.99:0,9,268	1/1:0,2:2:6.02:137,6,0	0/0:27,0:27:81.28:0,81,3378	0/0:36,0:36:99:0,102,4115	0/0:22,0:22:60.21:0,60,2437	0/0:29,0:29:81.28:0,81,3212	0/0:18,0:17:42.14:0,42,1733	0/0:16,0:16:42.14:0,42,1702	1/1:0,6:5:15.05:337,15,0	0/0:24,0:24:72.25:0,72,2889	0/0:25,0:25:69.24:0,69,2643	0/0:18,0:18:54.19:0,54,2267
chr10	44681596	.	GTTGT	G	3926.82	PASS	AB=0.633;AC=13;AF=0.250;AN=52;BaseQRankSum=10.918;DP=426;FS=2.398;HRun=0;HaplotypeScore=77.5840;InbreedingCoeff=0.6476;MQ=38.10;MQ0=26;MQRankSum=-7.330;QD=37.05;ReadPosRankSum=2.785;VQSLOD=3.8298;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:4,1:5:43.02:43,0,291	0/0:5,0:5:6.02:0,6,142	./.	./.	0/1:2,11:13:99:489,0,130	0/0:20,0:20:45.14:0,45,1147	0/0:18,0:14:24.08:0,24,632	0/0:38,0:21:60.14:0,60,1569	0/0:19,0:18:42.09:0,42,1148	0/0:28,0:19:48.16:0,48,1259	0/0:27,0:25:57.20:0,57,1520	0/0:8,0:7:15.05:0,15,410	0/0:10,0:10:18.06:0,18,492	0/0:16,0:16:21.07:0,21,575	0/0:20,0:20:33.11:0,33,902	0/0:11,0:11:24.07:0,24,599	0/0:19,0:17:42.14:0,42,1056	0/0:17,0:13:27.08:0,27,680	1/1:8,12:10:30.10:561,30,0	1/1:6,9:12:21.07:402,21,0	1/1:0,6:5:12.04:227,12,0	0/0:18,0:14:27.08:0,27,682	0/0:18,0:16:27.08:0,27,670	0/0:11,0:9:18.06:0,18,491	0/0:17,0:16:39.13:0,39,993	0/1:2,20:21:21.99:1044,0,22	1/1:0,21:19:51.17:987,51,0	1/1:1,3:4:9.03:174,9,0
chr10	44681851	.	C	CATGGTTTGCT	1038.68	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-0.960;DP=331;FS=0.000;HRun=0;HaplotypeScore=103.7044;InbreedingCoeff=0.9057;MQ=67.40;MQ0=0;MQRankSum=-2.921;QD=115.41;ReadPosRankSum=0.980;VQSLOD=4.1581;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:36.10:0,36,1120	1/1:0,4:5:9.03:490,9,0	0/0:18,0:16:19.21:0,19,1155	0/0:11,0:10:24.08:0,24,643	0/0:12,0:12:36.12:0,36,1255	0/0:17,0:17:51.18:0,51,1760	0/0:11,0:11:33.11:0,33,1130	0/0:17,0:17:51.18:0,51,1687	0/0:9,0:9:27.09:0,27,941	0/0:18,0:18:51.18:0,51,1763	0/0:14,0:14:39.13:0,39,1355	0/0:8,0:8:24.07:0,24,757	0/0:18,0:18:54.19:0,54,1882	0/0:9,0:9:24.08:0,24,838	0/0:10,0:10:27.09:0,27,942	0/0:3,0:3:9.03:0,9,312	1/1:2,2:4:12.04:657,12,0	0/0:7,0:7:21.07:0,21,609	0/0:10,0:10:27.09:0,27,907	0/0:14,0:14:36.12:0,36,1156	0/0:13,0:13:39.12:0,39,1180	0/0:12,0:12:33.11:0,33,1039	0/0:14,0:14:42.13:0,42,1385	0/0:6,0:6:18.06:0,18,603	0/0:18,0:17:51.15:0,51,1696	0/0:19,0:19:57.20:0,57,1956	0/0:12,0:12:36.12:0,36,1254	0/0:6,0:6:18.06:0,18,629
chr10	44683054	.	AT	A	1488.25	PASS	AC=14;AF=0.280;AN=50;BaseQRankSum=8.170;DP=445;FS=2.017;HRun=7;HaplotypeScore=50.4772;InbreedingCoeff=0.8871;MQ=38.82;MQ0=32;MQRankSum=-9.549;QD=16.91;ReadPosRankSum=3.998;VQSLOD=3.3363;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,6:6:18.04:183,18,0	0/0:3,4:2:2.98:0,3,22	./.	./.	1/1:3,13:11:24.05:245,24,0	0/0:22,0:21:33.11:0,33,415	0/0:22,0:8:5.99:0,6,60	0/0:26,0:5:12.04:0,12,151	0/0:16,0:16:30.10:0,30,377	0/0:31,0:23:60.18:0,60,744	0/0:27,0:24:32.87:0,33,415	0/0:11,0:11:24.07:0,24,295	0/0:18,0:16:15.05:0,15,189	0/0:16,0:14:24.08:0,24,302	0/0:17,0:17:30.08:0,30,353	0/0:15,0:13:27.09:0,27,339	0/0:11,0:5:3.01:0,3,38	0/0:17,0:16:27.04:0,27,322	1/1:3,4:3:9.02:92,9,0	1/1:4,10:12:21:203,21,0	./.	0/0:24,0:22:36.12:0,36,453	0/0:25,0:17:33.03:0,33,380	0/0:20,0:15:27.09:0,27,340	0/0:23,0:22:24.04:0,24,285	1/1:2,19:18:45.09:459,45,0	1/1:1,17:16:36.08:367,36,0	1/1:0,6:5:12.03:122,12,0
chr10	44683454	.	T	TTAA	5449.76	PASS	AC=44;AF=0.917;AN=48;BaseQRankSum=-2.762;DP=209;FS=26.994;HRun=0;HaplotypeScore=34.4364;InbreedingCoeff=0.3809;MQ=40.71;MQ0=64;MQRankSum=-3.365;QD=34.28;ReadPosRankSum=2.225;VQSLOD=3.0221;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	1/1:2,2:2:3.01:74,3,0	0/0:22,0:2:6.02:0,6,81	0/0:15,0:2:6.02:0,6,110	1/1:3,7:7:9.03:221,9,0	1/1:4,6:7:18.06:408,18,0	./.	1/1:1,2:2:6.02:148,6,0	1/1:2,2:2:3.01:74,3,0	1/1:1,5:2:6.02:148,6,0	1/1:4,8:9:21.07:516,21,0	1/1:1,2:2:6.02:147,6,0	1/1:0,5:7:12.04:284,12,0	1/1:1,3:4:9.03:186,9,0	1/1:1,4:4:6.02:147,6,0	1/1:2,4:4:9.03:221,9,0	./.	1/1:3,4:6:9.03:221,9,0	1/1:3,2:3:6.02:148,6,0	1/1:2,4:4:9.03:221,9,0	./.	1/1:2,12:12:24.08:589,24,0	1/1:3,10:8:15.05:368,15,0	1/1:2,3:3:3.01:74,3,0	1/1:3,9:9:24.08:590,24,0	1/1:0,3:3:6.02:148,6,0	1/1:3,11:9:18.06:442,18,0	1/1:0,2:2:3.01:74,3,0
chr10	44683624	.	TCTG	T	768.86	PASS	AC=20;AF=0.833;AN=24;BaseQRankSum=2.662;DP=260;FS=20.682;HRun=0;HaplotypeScore=53.6113;InbreedingCoeff=0.4109;MQ=18.38;MQ0=221;MQRankSum=-0.964;QD=8.64;ReadPosRankSum=1.967;VQSLOD=0.6661;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:12,0:1:3.01:0,3,41	0/0:21,0:2:6.02:0,6,110	1/1:7,5:4:9.03:110,9,0	./.	./.	./.	./.	1/1:10,4:4:12.04:154,12,0	1/1:6,4:4:9.02:102,9,0	./.	1/1:8,1:1:3.01:30,3,0	./.	./.	./.	./.	./.	./.	1/1:5,5:4:12.03:142,12,0	./.	1/1:8,4:4:12.03:140,12,0	1/1:4,2:1:3.01:38,3,0	./.	1/1:1,1:1:3.01:38,3,0	./.	1/1:5,1:1:3.01:32,3,0	1/1:6,2:2:6.02:77,6,0
chr10	44686454	.	AT	A	234.40	PASS	AB=0.650;AC=2;AF=0.036;AN=56;BaseQRankSum=4.588;DP=245;FS=1.166;HRun=5;HaplotypeScore=29.9744;InbreedingCoeff=-0.0531;MQ=50.20;MQ0=4;MQRankSum=-0.167;QD=9.77;ReadPosRankSum=0.277;VQSLOD=-0.3046;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:36.12:0,36,487	0/1:1,2:3:31.93:59,0,32	0/0:14,0:8:18.06:0,18,246	0/0:17,2:11:24:0,24,319	0/0:4,0:4:12.04:0,12,164	0/0:10,0:10:27.09:0,27,369	0/0:9,0:9:24.08:0,24,328	0/0:14,0:14:36.12:0,36,493	0/0:7,0:7:18.06:0,18,246	0/0:9,0:9:24.08:0,24,328	0/0:5,0:5:14.99:0,15,168	0/0:5,0:5:15.01:0,15,184	0/0:11,0:11:30.07:0,30,389	0/0:9,0:9:24.08:0,24,328	0/0:14,0:14:42.14:0,42,574	0/0:4,0:4:12.04:0,12,164	0/1:12,9:20:99:264,0,163	0/0:4,0:4:12.04:0,12,164	0/0:3,0:3:9.03:0,9,123	0/0:7,0:7:21.07:0,21,281	0/0:12,0:12:36.12:0,36,491	0/0:8,0:8:21.07:0,21,286	0/0:10,0:10:27.09:0,27,369	0/0:6,0:6:12.04:0,12,164	0/0:8,0:8:24.08:0,24,328	0/0:5,0:5:15.05:0,15,201	0/0:8,0:7:24.06:0,24,310	0/0:2,0:2:3.01:0,3,41
chr10	44686577	.	AC	A	220.09	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.490;DP=324;FS=7.417;HRun=5;HaplotypeScore=47.0678;InbreedingCoeff=0.7468;MQ=60.40;MQ0=4;MQRankSum=-4.860;QD=13.76;ReadPosRankSum=-0.149;VQSLOD=1.7319;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:39.13:0,39,533	1/1:1,2:3:3.01:33,3,0	0/0:9,0:9:21.07:0,21,274	0/0:6,0:5:3.13:0,3,62	0/0:15,0:15:33.11:0,33,450	0/0:13,0:13:36.11:0,36,476	0/0:25,0:25:69.22:0,69,929	0/0:20,0:20:54.16:0,54,711	0/0:13,0:13:30.10:0,30,410	0/0:13,0:13:30.10:0,30,403	0/0:14,0:13:39.13:0,39,530	0/0:8,0:8:24.08:0,24,328	0/0:12,0:12:33.11:0,33,451	0/0:19,0:19:51.17:0,51,693	0/0:14,0:14:42.14:0,42,574	0/0:11,0:11:30.10:0,30,409	1/1:2,11:13:25.94:295,26,0	0/0:9,0:9:27.09:0,27,369	0/0:8,0:8:15.03:0,15,188	0/0:5,0:3:6.02:0,6,82	0/0:14,0:14:36.10:0,36,462	0/0:14,0:13:27.09:0,27,359	0/0:7,0:7:18.06:0,18,246	0/0:10,0:10:27.09:0,27,369	0/0:14,0:14:33.10:0,33,434	0/0:7,0:7:21.07:0,21,287	0/0:9,0:9:18.02:0,18,225	0/0:5,0:5:12.04:0,12,164
chr10	44686622	.	AC	A	718.30	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=4.657;DP=398;FS=3.357;HRun=2;HaplotypeScore=48.3894;InbreedingCoeff=0.9559;MQ=56.53;MQ0=1;MQRankSum=-5.051;QD=29.93;ReadPosRankSum=-0.669;VQSLOD=2.8671;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:60.19:0,60,880	1/1:0,3:3:9.03:117,9,0	0/0:10,0:7:21.07:0,21,303	0/0:11,0:7:20.87:0,21,243	0/0:12,0:12:33.10:0,33,475	0/0:11,0:11:33.11:0,33,494	0/0:26,0:26:78.26:0,78,1168	0/0:21,0:20:57.17:0,57,814	0/0:11,0:11:30.10:0,30,433	0/0:11,0:11:33.11:0,33,494	0/0:16,0:16:45.03:0,45,613	0/0:14,0:14:42.13:0,42,609	0/0:15,0:15:45.15:0,45,673	0/0:18,0:18:51.17:0,51,758	0/0:17,0:17:51.16:0,51,744	0/0:17,0:17:45.14:0,45,650	1/1:1,20:21:57.14:716,57,0	0/0:15,0:15:42.09:0,42,584	0/0:11,0:11:27.08:0,27,382	0/0:8,0:8:24.08:0,24,356	0/0:30,0:30:87.23:0,87,1256	0/0:15,0:15:36.12:0,36,518	0/0:6,0:6:18.06:0,18,269	0/0:15,0:15:45.15:0,45,674	0/0:8,0:8:21.07:0,21,313	0/0:13,0:13:39.13:0,39,583	0/0:10,0:10:27.09:0,27,404	0/0:12,0:12:33.11:0,33,494
chr10	44687180	.	T	TTC	230.37	PASS	AB=0.595;AC=2;AF=0.038;AN=52;BaseQRankSum=-1.508;DP=736;FS=15.642;HRun=0;HaplotypeScore=71.8577;InbreedingCoeff=0.3233;MQ=29.43;MQ0=236;MQRankSum=0.881;QD=6.06;ReadPosRankSum=0.516;VQSLOD=1.7270;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:31:39:0,39,511	0/1:3,10:12:0.07:222,0,0	./.	./.	0/0:29,0:12:14.96:0,15,176	0/0:29,0:22:29.97:0,30,375	0/0:10,0:7:14.96:0,15,175	0/0:28,0:2:6.02:0,6,89	0/0:26,0:21:35.95:0,36,442	0/0:28,0:19:57.06:0,57,727	0/0:26,0:22:38.94:0,39,468	0/0:27,0:23:41.94:0,42,508	0/0:31,0:25:29.93:0,30,375	0/0:26,0:25:28.21:0,28,334	0/0:32,0:26:29.87:0,30,285	0/0:29,0:21:41.93:0,42,449	0/1:10,15:11:13.78:96,0,14	0/0:29,0:19:30.10:0,30,452	0/0:25,0:11:30.07:0,30,406	0/0:19,0:15:32.99:0,33,422	0/0:26,0:8:14.95:0,15,189	0/0:34,0:23:55.57:0,56,699	0/0:32,0:27:50.92:0,51,638	0/0:21,0:15:18.03:0,18,247	0/0:25,0:25:56.91:0,57,666	0/0:34,0:25:75.20:0,75,1042	0/0:35,0:21:39.01:0,39,536	0/0:13,0:6:9.03:0,9,136
chr10	44687801	.	GGGTTGT	G	325.06	PASS	AB=1.000;AC=9;AF=0.167;AN=54;BaseQRankSum=8.378;DP=398;FS=0.756;HRun=0;HaplotypeScore=100.7988;InbreedingCoeff=0.0513;MQ=53.05;MQ0=8;MQRankSum=-6.684;QD=2.52;ReadPosRankSum=4.004;VQSLOD=1.6232;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:15,0:14:61.55:62,0,89	./.	0/0:24,0:14:35.86:0,36,894	0/0:15,0:7:14.22:0,14,261	0/1:24,0:20:21:21,0,57	0/0:12,0:11:33.11:0,33,1087	0/0:6,0:5:12.04:0,12,288	0/0:19,0:17:48.14:0,48,1107	0/0:16,0:16:48.15:0,48,1498	0/0:26,0:22:65.21:0,65,932	0/0:20,1:17:51:0,51,839	0/0:4,0:4:9.03:0,9,271	0/0:9,0:8:21.07:0,21,546	0/0:10,0:9:18.03:0,18,413	0/0:11,0:11:26.98:0,27,368	0/0:10,0:10:30.05:0,30,557	1/1:2,6:7:6.02:152,6,0	0/0:10,0:10:20.90:0,21,305	0/1:16,0:11:51.41:51,0,108	0/1:19,0:9:8.92:30,0,9	0/0:7,0:7:2.44:0,2,13	0/0:14,0:14:33.10:0,33,786	0/0:20,0:18:46.57:0,47,1255	0/0:15,0:14:33.53:0,34,639	0/0:19,0:15:37.17:0,37,550	0/1:20,0:13:78.97:79,0,233	0/1:17,0:16:10.64:11,0,175	0/1:6,0:5:9.11:57,0,9
chr10	44687803	.	GTTGTTTT	G	2527.42	PASS	AB=0.897;AC=20;AF=0.370;AN=54;BaseQRankSum=4.498;DP=417;FS=1.123;HRun=0;HaplotypeScore=101.3875;InbreedingCoeff=0.5703;MQ=51.37;MQ0=9;MQRankSum=-2.198;QD=14.78;ReadPosRankSum=1.657;VQSLOD=2.7275;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,5:14:30.43:475,30,0	./.	0/0:26,0:14:40.33:0,40,562	0/0:15,0:7:9.57:0,10,223	1/1:0,20:17:15.11:212,15,0	0/0:11,0:10:30.09:0,30,969	0/0:5,0:4:6:0,6,103	0/0:18,0:15:36.07:0,36,774	0/0:15,0:15:42.12:0,42,1231	0/0:26,0:23:2.70:0,3,713	0/1:20,0:16:57.06:57,0,509	0/0:9,0:8:18.05:0,18,411	0/0:16,0:14:30.08:0,30,624	0/0:11,0:9:15.03:0,15,365	0/1:9,0:9:35.45:35,0,226	0/0:11,0:11:30.10:0,30,514	1/1:12,0:7:5.85:34,6,0	0/1:10,0:10:5.70:6,0,258	1/1:7,7:11:31.29:509,31,0	1/1:1,17:11:8.99:171,9,0	1/1:0,8:8:2.91:20,3,0	0/0:19,0:18:39.06:0,39,785	0/0:25,0:22:63:0,63,1222	0/0:18,0:13:23.95:0,24,344	0/0:18,0:14:6.62:0,7,466	0/1:6,14:13:49.19:537,0,49	1/1:11,4:14:27.47:354,27,0	1/1:2,4:5:13.29:307,13,0
chr10	44687804	.	TTG	T	2598.04	PASS	AB=1.000;AC=29;AF=0.537;AN=54;BaseQRankSum=2.394;DP=423;FS=6.416;HRun=0;HaplotypeScore=74.8090;InbreedingCoeff=0.8467;MQ=51.29;MQ0=10;MQRankSum=-0.467;QD=11.15;ReadPosRankSum=-0.070;VQSLOD=2.6805;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:13:32.94:297,33,0	./.	0/0:26,0:14:38.10:0,38,330	0/0:16,0:7:8:0,8,58	1/1:21,0:17:17.90:145,18,0	0/0:11,0:10:30.04:0,30,366	0/0:6,0:5:5.86:0,6,64	0/0:17,0:14:35.13:0,35,311	0/0:15,0:15:42:0,42,513	1/1:23,4:23:56.55:495,57,0	1/1:21,0:17:38.50:268,39,0	0/0:9,0:8:14.37:0,14,113	0/0:15,0:13:10.52:0,11,170	0/0:12,0:9:14.69:0,15,118	1/1:10,0:10:14.95:136,15,0	0/1:11,0:11:5.83:23,0,6	1/1:12,0:7:5.75:29,6,0	1/1:10,1:11:16.28:131,16,0	1/1:15,0:11:33.03:316,33,0	1/1:21,0:12:8.98:84,9,0	1/1:8,0:8:2.90:20,3,0	0/0:19,0:18:34.62:0,35,270	0/0:25,0:22:47.82:0,48,414	0/0:18,0:13:20.07:0,20,160	1/1:21,0:16:24.54:160,25,0	1/1:20,0:13:33.03:322,33,0	1/1:15,0:14:29.97:228,30,0	1/1:6,0:5:15.03:156,15,0
chr10	44687805	.	TG	T	3050.91	PASS	AB=1.000;AC=32;AF=0.593;AN=54;BaseQRankSum=1.562;DP=428;FS=4.588;HRun=1;HaplotypeScore=70.0931;InbreedingCoeff=0.7655;MQ=52.51;MQ0=10;MQRankSum=-2.476;QD=11.83;ReadPosRankSum=-2.364;VQSLOD=1.1961;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:13:32.90:270,33,0	./.	0/0:23,3:14:38.11:0,38,315	0/0:17,1:9:9.06:0,9,69	1/1:21,0:17:17.88:134,18,0	0/0:10,1:10:29.23:0,29,258	0/0:7,0:6:5.40:0,5,51	0/0:19,0:15:25.18:0,25,218	0/0:15,0:15:41.18:0,41,376	1/1:26,2:24:65.82:579,66,0	1/1:19,2:17:47.98:433,48,0	0/1:9,0:8:7.60:8,0,48	0/1:15,0:13:6.09:6,0,94	0/0:12,0:9:10.12:0,10,86	1/1:10,1:11:26.10:206,26,0	1/1:9,1:10:24.06:135,24,0	1/1:12,0:7:4.99:17,5,0	1/1:10,1:11:21.02:157,21,0	1/1:15,0:11:32.99:290,33,0	1/1:20,1:12:8.97:73,9,0	1/1:8,0:8:2.89:20,3,0	0/0:19,0:18:9.62:0,10,182	0/0:24,0:21:32.41:0,32,284	0/0:18,0:13:7.68:0,8,124	1/1:19,2:16:37.05:287,37,0	1/1:20,0:13:34.23:293,34,0	1/1:15,0:14:29.64:214,30,0	1/1:6,0:5:15.01:134,15,0
chr10	44688902	.	A	AT	235.53	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=4.752;DP=615;FS=2.910;HRun=3;HaplotypeScore=90.0263;InbreedingCoeff=0.7242;MQ=56.21;MQ0=9;MQRankSum=-1.433;QD=4.53;ReadPosRankSum=-1.235;VQSLOD=-0.0800;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:60.18:0,60,715	1/1:2,12:5:6.02:84,6,0	0/0:28,0:16:41.76:0,42,460	0/1:25,0:11:18.71:19,0,176	0/0:24,0:24:66.20:0,66,790	0/0:22,0:22:63.19:0,63,756	0/0:12,0:12:30.09:0,30,360	0/0:43,0:36:99:0,102,1196	0/0:25,0:25:75.22:0,75,889	0/0:34,0:34:99:0,99,1176	0/0:23,0:23:57.17:0,57,681	0/0:14,0:14:42.13:0,42,503	0/0:18,0:18:48.15:0,48,575	0/0:16,0:16:45.12:0,45,528	0/0:16,0:16:39.12:0,39,468	0/0:21,0:21:63.19:0,63,755	1/1:2,11:9:18.06:252,18,0	0/0:23,0:23:63.15:0,63,740	0/0:29,0:21:60.17:0,60,708	0/0:35,0:35:99:0,102,1190	0/0:13,0:13:36.11:0,36,431	0/0:16,0:16:39.12:0,39,467	0/0:21,0:21:57.17:0,57,684	0/0:20,0:19:51.16:0,51,612	0/0:12,0:12:33.10:0,33,396	0/0:20,0:20:60.17:0,60,706	0/0:40,0:38:99:0,111,1291	0/0:18,0:18:51.16:0,51,612
chr10	44689011	.	ACTTGT	A	13270.15	PASS	AB=0.820;AC=42;AF=0.778;AN=54;BaseQRankSum=11.195;DP=464;FS=13.046;HRun=0;HaplotypeScore=72.2589;InbreedingCoeff=0.7065;MQ=44.32;MQ0=52;MQRankSum=-2.837;QD=39.49;ReadPosRankSum=3.040;VQSLOD=3.9621;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,20:18:39.13:845,39,0	./.	0/0:29,0:6:17.99:0,18,315	0/0:20,0:5:12.04:0,12,380	1/1:0,8:5:3.01:65,3,0	0/0:25,0:24:66.07:0,66,1517	0/0:16,0:13:33.04:0,33,697	1/1:3,16:10:24.07:480,24,0	0/0:35,0:35:93.30:0,93,2764	1/1:3,17:18:51.18:1101,51,0	1/1:2,15:16:42.14:911,42,0	1/1:0,6:5:15.05:325,15,0	1/1:1,24:22:44.89:969,45,0	1/1:0,21:18:45.15:975,45,0	1/1:0,10:9:27.09:577,27,0	1/1:4,12:12:33.09:622,33,0	0/1:6,0:3:18.98:19,0,86	0/1:7,9:11:63.10:484,0,63	1/1:5,13:13:30.04:489,30,0	1/1:0,16:16:27.09:585,27,0	1/1:1,15:13:12.51:261,13,0	1/1:1,12:12:33.11:715,33,0	1/1:3,15:15:36.12:780,36,0	1/1:2,22:21:57.20:1236,57,0	1/1:0,14:14:42.14:911,42,0	1/1:3,9:10:27.08:527,27,0	1/1:3,15:16:15.05:326,15,0	1/1:0,1:1:3.01:65,3,0
chr10	44689103	.	TG	T	2246.95	PASS	AB=1.000;AC=11;AF=0.239;AN=46;BaseQRankSum=5.279;DP=598;FS=3.210;HRun=1;HaplotypeScore=35.4608;InbreedingCoeff=0.8431;MQ=40.47;MQ0=56;MQRankSum=-0.292;QD=17.69;ReadPosRankSum=-1.194;VQSLOD=3.4568;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:25:24.08:0,24,383	0/0:4,0:1:3.01:0,3,48	0/0:27,0:3:9:0,9,117	./.	./.	0/0:20,0:16:18.06:0,18,288	0/0:12,0:11:18.06:0,18,288	0/0:23,0:19:57.18:0,57,884	0/0:25,0:23:33.08:0,33,480	1/1:0,37:33:96.31:1318,96,0	1/1:1,25:23:27.09:377,27,0	0/0:18,0:16:24.08:0,24,383	0/0:23,0:20:33.11:0,33,526	0/0:29,0:23:27.09:0,27,431	1/1:1,12:12:18.06:252,18,0	1/1:1,20:17:27.09:377,27,0	./.	./.	0/0:22,0:16:48.16:0,48,767	0/0:37,0:35:24.06:0,24,344	0/1:21,0:17:0:0,0,0	0/0:21,0:19:9.03:0,9,144	0/0:25,0:23:24.08:0,24,367	0/0:16,0:12:6:0,6,71	1/1:0,9:8:6.02:80,6,0	0/0:18,0:18:54.17:0,54,830	0/0:38,0:34:42.14:0,42,664	./.
chr10	44689242	.	AT	A	1093.66	PASS	AC=10;AF=0.417;AN=24;BaseQRankSum=1.942;DP=587;FS=5.096;HRun=2;HaplotypeScore=14.6914;InbreedingCoeff=0.7748;MQ=16.11;MQ0=357;MQRankSum=1.246;QD=9.85;ReadPosRankSum=1.538;VQSLOD=1.4678;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	1/1:2,13:11:9.03:125,9,0	0/0:24,0:3:3.01:0,3,35	./.	./.	./.	0/0:23,0:13:36.12:0,36,575	0/0:19,0:17:15.05:0,15,239	./.	./.	./.	./.	./.	./.	./.	1/1:10,10:4:9.03:126,9,0	1/1:0,25:23:48.16:669,48,0	./.	0/0:19,0:12:18.06:0,18,272	0/0:30,0:23:23.81:0,24,368	0/0:10,0:2:3.01:0,3,48	0/0:9,0:7:14.74:0,15,238	1/1:11,19:8:18.06:252,18,0	./.	1/1:3,18:5:3.01:42,3,0
chr10	44690881	.	A	AG	4923.78	PASS	AB=0.917;AC=50;AF=0.962;AN=52;BaseQRankSum=-2.429;DP=180;FS=5.746;HRun=2;HaplotypeScore=26.5741;InbreedingCoeff=0.0755;MQ=42.75;MQ0=4;MQRankSum=-0.031;QD=27.51;ReadPosRankSum=0.837;VQSLOD=4.0813;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,5:5:2.96:43,3,0	./.	0/1:1,0:1:0:0,0,0	0/1:4,1:4:34.39:34,0,35	1/1:1,7:7:12.02:168,12,0	1/1:2,6:8:15.05:215,15,0	1/1:0,11:7:18.06:259,18,0	1/1:1,8:6:18.06:259,18,0	1/1:1,15:12:27.09:378,27,0	1/1:0,10:10:30.10:431,30,0	1/1:1,5:6:9.03:129,9,0	1/1:0,7:6:18.06:258,18,0	1/1:0,13:12:36.08:494,36,0	1/1:1,9:10:27.09:382,27,0	1/1:0,4:3:6.02:86,6,0	1/1:0,4:2:9.03:124,9,0	./.	1/1:0,1:1:3.01:43,3,0	1/1:1,4:4:12.04:172,12,0	1/1:0,6:6:9:125,9,0	1/1:0,4:4:3.01:43,3,0	1/1:0,8:8:15.01:192,15,0	1/1:1,7:8:24.08:337,24,0	1/1:0,7:7:3.01:43,3,0	1/1:0,8:8:18.02:235,18,0	1/1:1,4:5:12.04:173,12,0	1/1:1,4:4:12.04:172,12,0	1/1:0,3:3:9.03:127,9,0
chr10	44691609	.	AATG	A	368.27	PASS	AC=2;AF=0.038;AN=52;BaseQRankSum=5.047;DP=550;FS=4.805;HRun=0;HaplotypeScore=70.7199;InbreedingCoeff=0.7717;MQ=37.65;MQ0=118;MQRankSum=-4.303;QD=30.69;ReadPosRankSum=-0.266;VQSLOD=3.5043;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:45:93.26:0,93,2127	0/0:12,0:6:9.03:0,9,219	./.	./.	0/0:23,0:16:33.11:0,33,780	0/0:25,0:25:48.12:0,48,1108	0/0:12,0:7:21.07:0,21,482	1/1:0,12:10:30.10:462,30,0	0/0:19,0:17:27.09:0,27,665	0/0:19,0:12:33.11:0,33,788	0/0:16,0:15:30.10:0,30,697	0/0:19,0:18:45.15:0,45,1106	0/0:13,0:11:27.08:0,27,615	0/0:19,0:17:35.84:0,36,876	0/0:18,0:15:23.65:0,24,578	0/0:15,0:12:27.09:0,27,662	0/0:22,0:9:6.02:0,6,130	0/0:19,0:18:30.10:0,30,699	0/0:21,0:15:45.15:0,45,1108	0/0:27,0:18:21.07:0,21,515	0/0:14,0:12:27.09:0,27,607	0/0:16,0:9:5.99:0,6,95	0/0:21,0:14:24.01:0,24,458	0/0:14,0:9:30.06:0,30,661	0/0:12,0:9:24.08:0,24,589	0/0:28,0:19:57.20:0,57,1380	0/0:29,0:18:39.12:0,39,908	0/0:28,0:21:30.10:0,30,739
chr10	44691614	.	G	GA	312.72	PASS	AC=2;AF=0.038;AN=52;BaseQRankSum=4.211;DP=569;FS=4.720;HRun=0;HaplotypeScore=64.3539;InbreedingCoeff=0.7256;MQ=37.33;MQ0=124;MQRankSum=-3.504;QD=22.34;ReadPosRankSum=-0.854;VQSLOD=4.8558;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:43:84.26:0,84,1152	0/0:10,0:4:9.03:0,9,117	./.	./.	0/0:23,0:17:33.05:0,33,422	0/0:27,0:27:45.13:0,45,606	0/0:15,0:9:21.03:0,21,267	1/1:1,13:11:33.05:406,33,0	0/0:20,0:18:26.88:0,27,370	0/0:20,0:13:36.08:0,36,481	0/0:15,0:14:27.09:0,27,372	0/0:22,0:21:48.15:0,48,654	0/0:13,0:11:23.97:0,24,335	0/0:18,0:16:33.11:0,33,461	0/0:16,0:13:18.06:0,18,250	0/0:16,0:13:30.10:0,30,417	0/0:24,0:11:6.02:0,6,78	0/0:17,0:16:27.09:0,27,374	0/0:25,0:17:51.17:0,51,710	0/0:29,0:20:24.08:0,24,334	0/0:16,0:14:27.09:0,27,375	0/0:15,0:8:3.01:0,3,42	0/0:22,0:15:20.97:0,21,276	0/0:12,0:7:24.08:0,24,334	0/0:13,0:10:24.08:0,24,334	0/0:31,0:22:60.20:0,60,835	0/0:28,0:17:36.07:0,36,496	0/0:29,0:22:32.99:0,33,443
chr10	44693647	.	AGGAT	A	2391.88	PASS	AB=0.833;AC=16;AF=0.333;AN=48;BaseQRankSum=8.166;DP=294;FS=0.000;HRun=0;HaplotypeScore=34.7013;InbreedingCoeff=0.6664;MQ=35.59;MQ0=39;MQRankSum=-0.557;QD=38.58;ReadPosRankSum=2.991;VQSLOD=3.4498;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,1:1:3.01:63,3,0	./.	./.	./.	1/1:0,10:10:27.09:563,27,0	0/0:7,0:6:9.03:0,9,259	0/0:7,0:6:6.02:0,6,173	0/0:21,0:5:15.05:0,15,434	0/0:9,0:8:3.01:0,3,86	0/0:15,0:13:36.12:0,36,1043	0/0:10,0:10:18.06:0,18,487	0/0:10,0:9:3.01:0,3,86	0/1:11,0:9:0.01:0,0,0	0/0:10,0:7:3.01:0,3,86	0/0:16,0:14:6.02:0,6,173	0/0:9,0:7:5.98:0,6,173	./.	0/0:29,0:23:36.05:0,36,1038	1/1:1,4:4:9.03:189,9,0	1/1:0,5:5:15.05:313,15,0	1/1:1,7:7:21.07:440,21,0	0/0:13,0:12:24.08:0,24,692	0/0:12,0:10:24.08:0,24,693	0/0:10,0:10:18.06:0,18,521	0/0:9,0:7:18.06:0,18,520	0/1:3,3:5:74.88:177,0,75	1/1:0,5:5:12.04:250,12,0	1/1:0,9:9:27.09:566,27,0
chr10	44694028	.	A	AC	992.99	PASS	AB=0.861;AC=5;AF=0.119;AN=42;BaseQRankSum=3.295;DP=398;FS=36.502;HRun=0;HaplotypeScore=46.0148;InbreedingCoeff=0.6577;MQ=56.75;MQ0=16;MQRankSum=-4.719;QD=15.52;ReadPosRankSum=0.895;VQSLOD=2.0186;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:18,0:10:27.09:0,27,373	0/1:26,5:15:99:203,0,277	1/1:1,6:4:6.02:95,6,0	0/0:21,0:21:54.04:0,54,693	0/0:10,0:8:24.08:0,24,335	0/0:25,0:20:57.18:0,57,781	0/0:15,0:15:45.12:0,45,601	0/0:25,0:25:72.24:0,72,1007	0/0:17,0:17:30.02:0,30,377	0/0:11,0:11:30.10:0,30,418	0/0:14,1:14:39.13:0,39,544	0/0:10,0:10:30.10:0,30,415	0/0:24,2:24:69.23:0,69,958	0/0:18,0:18:48.16:0,48,670	./.	0/0:23,0:23:63.17:0,63,851	./.	1/1:0,26:20:51.17:810,51,0	./.	0/0:21,0:21:27.09:0,27,377	0/0:25,0:25:45.15:0,45,628	0/0:15,0:15:45.08:0,45,587	0/0:17,0:17:30.06:0,30,397	0/0:4,0:1:3.01:0,3,42	./.	./.
chr10	44694420	.	T	TA	1698.83	PASS	AC=12;AF=0.222;AN=54;BaseQRankSum=-0.645;DP=598;FS=7.741;HRun=8;HaplotypeScore=41.2839;InbreedingCoeff=0.8670;MQ=40.28;MQ0=120;MQRankSum=-1.252;QD=15.88;ReadPosRankSum=1.122;VQSLOD=2.8386;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:20:35.97:0,36,321	0/0:4,0:1:3:0,3,27	./.	0/0:10,0:1:3:0,3,27	0/0:36,0:23:45:0,45,406	0/0:22,0:20:51.03:0,51,467	0/0:22,0:10:24.01:0,24,220	0/0:35,0:2:6:0,6,55	0/0:21,0:20:39.02:0,39,357	0/0:31,0:22:53.98:0,54,486	0/0:28,0:18:34.26:0,34,305	1/1:3,11:13:18.05:208,18,0	1/1:3,14:13:24.07:277,24,0	1/1:3,13:11:21:225,21,0	0/0:19,0:18:36.02:0,36,329	0/0:21,0:18:51.03:0,51,467	0/0:10,1:2:2.04:0,2,6	0/0:34,0:23:36.02:0,36,329	0/0:19,0:12:33:0,33,296	0/0:34,0:27:45.01:0,45,412	0/0:6,0:5:9:0,9,82	1/1:6,14:13:27.07:305,27,0	1/1:6,19:21:45.13:519,45,0	1/1:2,13:13:30.09:346,30,0	0/0:22,0:21:44.98:0,45,404	0/0:31,0:27:78.04:0,78,714	0/0:34,0:24:45.02:0,45,411	0/0:16,0:10:27.01:0,27,247
chr10	44696704	.	T	TC	2257.36	PASS	AB=0.600;AC=17;AF=0.315;AN=54;BaseQRankSum=11.281;DP=501;FS=0.000;HRun=0;HaplotypeScore=75.7487;InbreedingCoeff=0.8899;MQ=72.27;MQ0=1;MQRankSum=-10.100;QD=23.03;ReadPosRankSum=-0.414;VQSLOD=4.4114;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,21:16:30.78:510,31,0	1/1:0,0:1:3.01:45,3,0	0/0:21,0:21:63.04:0,63,841	0/0:23,0:23:63.16:0,63,822	1/1:0,8:7:15.05:239,15,0	0/0:22,0:22:63.19:0,63,860	0/0:16,0:16:48.14:0,48,653	0/0:25,0:24:69.20:0,69,916	0/0:21,0:21:60.17:0,60,815	0/0:38,0:38:99:0,111,1549	0/0:23,0:23:60.17:0,60,802	0/0:18,0:18:51.17:0,51,713	0/0:18,0:18:51.15:0,51,695	0/0:30,0:30:84.28:0,84,1173	0/0:16,0:16:36.12:0,36,503	0/0:23,0:23:60.19:0,60,821	./.	0/0:14,0:14:39.13:0,39,545	1/1:1,10:7:21.07:334,21,0	1/1:1,11:7:7.56:229,8,0	0/1:3,6:7:0.79:129,0,1	0/0:25,0:24:57.19:0,57,789	0/0:21,0:21:60.20:0,60,836	0/0:26,0:26:78.22:0,78,1068	0/0:23,0:23:57.17:0,57,774	1/1:0,13:11:30.10:475,30,0	1/1:3,12:11:24.72:396,25,0	1/1:0,4:2:6.02:94,6,0
chr10	44696715	.	C	CAGTT	4265.78	PASS	AC=18;AF=0.333;AN=54;BaseQRankSum=11.205;DP=511;FS=1.112;HRun=0;HaplotypeScore=96.6066;InbreedingCoeff=0.9491;MQ=71.19;MQ0=0;MQRankSum=-11.696;QD=39.50;ReadPosRankSum=-1.585;VQSLOD=4.7895;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,19:14:30.06:699,30,0	1/1:0,0:1:3.01:78,3,0	0/0:21,0:21:53.91:0,54,943	0/0:29,0:29:71.72:0,72,1305	1/1:5,4:8:18.05:345,18,0	0/0:21,0:21:60.12:0,60,1123	0/0:18,0:18:54.08:0,54,1042	0/0:23,0:21:60.13:0,60,1116	0/0:23,0:23:69.11:0,69,1203	0/0:39,0:39:99:0,117,2310	0/0:20,0:20:54.19:0,54,1113	0/0:19,0:19:51.17:0,51,1031	0/0:18,0:18:54.10:0,54,1015	0/0:27,0:27:75.23:0,75,1453	0/0:15,0:15:30.01:0,30,541	0/0:18,0:18:48.07:0,48,859	./.	0/0:13,0:13:36.09:0,36,677	1/1:6,7:9:18.04:457,18,0	1/1:6,8:9:26.96:498,27,0	1/1:1,7:6:15.01:266,15,0	0/0:21,0:21:57.15:0,57,1149	0/0:20,0:20:57.20:0,57,1175	0/0:31,0:31:93.31:0,93,1867	0/0:27,0:27:75.24:0,75,1475	1/1:2,11:11:33.11:951,33,0	1/1:4,13:14:30.06:798,30,0	1/1:1,4:6:6.02:173,6,0
chr10	44696999	.	A	AT	1282.26	PASS	AB=0.531;AC=17;AF=0.315;AN=54;BaseQRankSum=4.553;DP=495;FS=0.000;HRun=3;HaplotypeScore=42.6540;InbreedingCoeff=0.8254;MQ=54.90;MQ0=26;MQRankSum=-6.858;QD=12.70;ReadPosRankSum=-0.340;VQSLOD=1.6860;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,8:10:21.07:281,21,0	./.	0/0:17,0:11:33.08:0,33,394	0/0:14,0:11:23.86:0,24,268	1/1:0,14:8:15.05:214,15,0	0/0:25,0:25:72.16:0,72,829	0/0:13,0:12:36.11:0,36,445	0/0:31,0:31:81.25:0,81,992	0/0:33,0:33:93.29:0,93,1152	0/0:30,0:30:84.26:0,84,1041	0/0:22,0:22:57.18:0,57,706	0/0:13,0:13:39.11:0,39,471	0/0:15,0:15:45.13:0,45,545	0/0:25,0:25:69.20:0,69,842	0/0:25,1:26:40.83:0,41,858	0/0:23,0:23:63.20:0,63,781	1/1:4,2:3:3.01:43,3,0	0/0:19,0:19:26.57:0,27,575	1/1:1,9:3:9.03:130,9,0	1/1:0,18:8:24.05:322,24,0	1/1:2,3:4:9:108,9,0	0/0:16,0:16:48.15:0,48,595	0/0:32,0:32:96.30:0,96,1187	0/0:15,0:15:45.14:0,45,557	0/0:24,0:24:72.21:0,72,878	0/1:2,15:8:56.36:137,0,56	1/1:3,16:9:15.01:192,15,0	1/1:0,1:1:3.01:43,3,0
chr10	44697075	.	GTT	G	79.48	PASS	AB=0.615;AC=1;AF=0.019;AN=52;BaseQRankSum=3.405;DP=628;FS=8.809;HRun=2;HaplotypeScore=87.8668;InbreedingCoeff=-0.0222;MQ=51.95;MQ0=64;MQRankSum=-3.161;QD=9.93;ReadPosRankSum=-0.645;VQSLOD=-0.2683;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:45.15:0,45,906	0/1:3,5:6:99:154,0,103	./.	./.	0/0:24,0:20:51.17:0,51,998	0/0:27,0:27:69.24:0,69,1400	0/0:11,0:9:18.06:0,18,365	0/0:36,0:24:69.20:0,69,1216	0/0:23,0:23:69.24:0,69,1392	0/0:37,0:34:99:0,102,2028	0/0:26,0:26:72.23:0,72,1419	0/0:15,0:15:39.11:0,39,717	0/0:25,0:25:68.57:0,69,1270	0/0:24,0:24:69.23:0,69,1355	0/0:23,0:23:69.19:0,69,1259	0/0:23,0:23:60.19:0,60,1116	0/0:7,0:3:9.03:0,9,177	0/0:24,0:24:72.23:0,72,1389	0/0:19,0:12:36.12:0,36,731	0/0:29,0:25:75.26:0,75,1506	0/0:13,0:12:36.12:0,36,730	0/0:16,0:16:48.16:0,48,957	0/0:25,0:25:72.25:0,72,1449	0/0:21,0:21:63.21:0,63,1230	0/0:32,0:32:90.30:0,90,1752	0/0:30,0:26:78.27:0,78,1583	0/0:24,0:22:66.23:0,66,1340	0/0:27,0:25:75.26:0,75,1523
chr10	44697115	.	A	AG	121.65	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=3.674;DP=633;FS=12.062;HRun=1;HaplotypeScore=82.3225;InbreedingCoeff=0.8812;MQ=55.92;MQ0=13;MQRankSum=-3.574;QD=10.14;ReadPosRankSum=0.954;VQSLOD=0.2515;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:21:54.18:0,54,701	1/1:1,7:5:12.04:179,12,0	0/0:33,0:9:24.07:0,24,298	0/0:23,0:10:24.41:0,24,283	0/0:26,0:26:75.24:0,75,974	0/0:29,0:29:87.25:0,87,1100	0/0:10,0:10:27.09:0,27,350	0/0:30,0:29:78.23:0,78,988	0/0:17,0:17:51.17:0,51,662	0/0:32,0:32:93.30:0,93,1208	0/0:26,0:26:75.24:0,75,971	0/0:13,0:13:36.10:0,36,453	0/0:21,0:21:60.19:0,60,778	0/0:19,0:19:54.18:0,54,701	0/0:21,0:21:54.18:0,54,701	0/0:22,0:22:66.21:0,66,857	1/1:1,3:1:3.01:45,3,0	0/0:25,0:24:72.23:0,72,935	0/0:21,0:16:45.15:0,45,584	0/0:31,0:30:84.27:0,84,1090	0/0:18,0:17:51.14:0,51,646	0/0:20,0:20:60.17:0,60,752	0/0:29,0:29:84.27:0,84,1090	0/0:25,0:25:72.21:0,72,919	0/0:29,0:29:84.26:0,84,1077	0/0:24,0:23:69.22:0,69,896	0/0:22,0:20:60.19:0,60,777	0/0:32,0:32:81.22:0,81,1033
chr10	44697510	.	A	AT	8286.93	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=6.521;DP=501;FS=3.201;HRun=7;HaplotypeScore=78.0418;InbreedingCoeff=0.9626;MQ=57.55;MQ0=30;MQRankSum=0.653;QD=19.23;ReadPosRankSum=2.277;VQSLOD=4.6651;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:22:59.68:458,60,0	1/1:4,0:2:6:51,6,0	0/0:15,0:13:28.51:0,29,287	0/0:9,0:7:14.84:0,15,124	1/1:22,0:21:59.61:450,60,0	0/0:20,0:20:54.08:0,54,521	0/0:9,0:9:27.04:0,27,260	1/1:6,20:25:57.17:687,57,0	0/0:15,0:17:46.14:0,46,418	1/1:3,14:14:33.10:399,33,0	1/1:2,18:18:45:519,45,0	1/1:20,0:19:47.47:319,47,0	1/1:14,0:14:29.80:225,30,0	1/1:12,0:12:35.66:248,36,0	1/1:3,16:16:39.12:471,39,0	1/1:1,9:6:15.05:181,15,0	1/1:28,0:25:56.70:433,57,0	1/1:0,7:7:21.06:254,21,0	1/1:11,0:8:14.69:92,15,0	1/1:30,0:27:65.38:457,65,0	1/1:10,0:9:23.87:180,24,0	1/1:19,0:17:50.48:346,50,0	1/1:28,0:28:77.25:541,77,0	1/1:19,0:19:50.66:372,51,0	1/1:0,17:15:42.13:507,42,0	1/1:25,1:22:52.80:330,53,0	1/1:34,0:29:71.43:519,71,0	1/1:13,0:12:35.68:249,36,0
chr10	44697511	.	T	TC	7577.19	PASS	AB=1.000;AC=30;AF=0.536;AN=56;BaseQRankSum=-0.423;DP=509;FS=9.557;HRun=0;HaplotypeScore=80.0411;InbreedingCoeff=0.6007;MQ=56.06;MQ0=33;MQRankSum=-0.782;QD=22.22;ReadPosRankSum=2.566;VQSLOD=6.2719;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,25:23:60.20:895,60,0	1/1:0,4:2:6.02:89,6,0	0/0:14,0:12:32.83:0,33,415	0/0:9,0:7:14.63:0,15,178	1/1:0,22:21:60.20:892,60,0	0/0:21,0:21:60.18:0,60,806	0/0:9,0:9:27.09:0,27,376	0/1:26,0:25:94.16:137,0,94	0/0:17,0:17:50.89:0,51,645	0/1:17,0:14:19.69:63,0,20	0/1:21,0:18:3.68:119,0,4	0/0:20,0:19:37.49:0,37,126	0/1:14,0:14:3.24:3,0,29	0/0:12,0:12:21.73:0,22,78	0/1:19,0:16:31.49:109,0,31	0/1:10,0:6:10.17:33,0,10	1/1:1,27:25:63.08:879,63,0	1/1:7,0:7:17.60:69,18,0	1/1:2,10:9:24.03:298,24,0	1/1:1,29:27:75.05:1039,75,0	1/1:0,10:9:24.08:358,24,0	0/0:19,0:17:30.99:0,31,115	0/0:28,0:28:47.70:0,48,181	0/0:19,0:19:17.70:0,18,84	1/1:17,0:15:37.77:178,38,0	1/1:3,24:22:37.79:819,38,0	1/1:2,34:30:72.24:1058,72,0	1/1:2,13:14:35.98:538,36,0
chr10	44697513	.	T	TA	5133.93	PASS	AB=1.000;AC=26;AF=0.464;AN=56;BaseQRankSum=-8.235;DP=516;FS=7.094;HRun=0;HaplotypeScore=88.4596;InbreedingCoeff=0.5637;MQ=54.91;MQ0=40;MQRankSum=-4.650;QD=17.46;ReadPosRankSum=1.291;VQSLOD=7.2309;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:23:7.95:8,0,34	1/1:4,0:2:3.37:8,3,0	0/0:15,0:11:32.84:0,33,432	0/0:11,0:7:14.95:0,15,192	0/0:21,0:20:1.33:0,1,49	0/0:23,0:23:60.18:0,60,807	0/0:9,0:9:27.09:0,27,377	0/1:27,0:26:99:147,0,107	0/0:17,0:17:47.89:0,48,617	1/1:16,0:13:9.17:76,9,0	0/1:22,0:18:4.27:115,0,4	1/1:1,21:21:48.16:719,48,0	1/1:1,15:16:30.10:447,30,0	1/1:1,14:15:36.12:538,36,0	0/1:19,0:16:7.76:112,0,8	0/1:11,0:6:10.40:34,0,10	0/1:25,0:22:1.89:2,0,57	1/1:8,0:7:17.82:71,18,0	0/0:11,0:8:18.21:0,18,109	0/0:29,0:26:38.83:0,39,186	0/0:10,0:9:5.61:0,6,20	1/1:1,19:18:51.17:763,51,0	1/1:0,27:27:78.17:1165,78,0	1/1:0,18:18:51.17:754,51,0	1/1:18,0:16:37.64:177,38,0	0/0:27,0:22:50.75:0,51,278	0/0:34,0:27:29.68:0,30,110	0/0:15,0:14:19.54:0,20,79
chr10	44697948	.	GT	G	260.33	PASS	AB=0.725;AC=2;AF=0.045;AN=44;BaseQRankSum=5.161;DP=522;FS=1.113;HRun=4;HaplotypeScore=56.4610;InbreedingCoeff=-0.0568;MQ=47.58;MQ0=85;MQRankSum=0.170;QD=6.20;ReadPosRankSum=0.156;VQSLOD=-0.2019;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:31:78.08:0,78,997	0/1:13,5:15:99:138,0,298	./.	./.	0/0:20,0:20:54.18:0,54,755	0/0:21,0:21:60.20:0,60,840	0/0:20,0:18:42.11:0,42,550	0/0:35,0:17:39.11:0,39,511	0/0:29,0:29:84.28:0,84,1175	0/0:8,0:5:15.05:0,15,204	./.	0/0:22,0:22:60.20:0,60,839	0/0:21,0:21:63.19:0,63,864	0/0:16,0:16:42.11:0,42,549	./.	0/0:1,0:1:3.01:0,3,42	0/1:12,12:18:99:209,0,250	./.	0/0:20,0:8:24.08:0,24,336	0/0:18,0:18:48.16:0,48,671	0/0:18,0:17:45.14:0,45,613	0/0:21,0:21:57.17:0,57,764	0/0:22,0:22:54.17:0,54,734	0/0:15,0:14:42.12:0,42,568	./.	0/0:28,0:28:78.24:0,78,1072	0/0:31,0:31:90.20:0,90,1197	0/0:13,0:13:39.11:0,39,527
chr10	44698023	.	AT	A	2424.19	PASS	AC=12;AF=0.273;AN=44;BaseQRankSum=3.971;DP=437;FS=5.950;HRun=7;HaplotypeScore=61.2877;InbreedingCoeff=0.9381;MQ=48.17;MQ0=38;MQRankSum=6.933;QD=22.87;ReadPosRankSum=-0.100;VQSLOD=3.5831;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:15:30:0,30,340	0/0:12,0:11:27.09:0,27,340	./.	0/0:11,0:5:3.01:0,3,38	0/0:16,0:15:39.04:0,39,453	0/0:31,0:30:87.27:0,87,1082	0/0:13,0:13:30.10:0,30,377	0/0:30,0:20:54.14:0,54,651	0/0:16,0:16:45.14:0,45,566	./.	./.	1/1:3,21:24:60.13:607,60,0	1/1:2,15:17:39.09:398,39,0	1/1:1,9:10:24.05:245,24,0	./.	./.	0/0:28,0:27:60.19:0,60,752	0/0:2,0:2:6.02:0,6,75	0/0:14,0:8:21.07:0,21,264	0/0:30,0:25:63.12:0,63,757	0/0:13,0:12:24.03:0,24,284	1/1:0,20:20:51.12:520,51,0	1/1:3,21:23:54.07:551,54,0	1/1:1,10:10:27.06:275,27,0	./.	0/0:28,0:27:72.22:0,72,894	0/0:33,0:33:75.20:0,75,926	0/0:16,0:14:42.13:0,42,525
chr10	44699987	.	CT	C	3161.19	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=12.568;DP=617;FS=2.250;HRun=8;HaplotypeScore=59.1393;InbreedingCoeff=0.9510;MQ=56.03;MQ0=31;MQRankSum=-0.756;QD=15.20;ReadPosRankSum=0.323;VQSLOD=3.6132;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,27:27:30.05:290,30,0	1/1:4,6:5:9.01:86,9,0	0/0:16,0:11:29.67:0,30,321	0/0:15,0:11:27.04:0,27,297	1/1:1,28:25:63:589,63,0	0/0:22,0:21:60.14:0,60,708	0/0:19,0:19:42.08:0,42,480	0/0:32,0:32:84.25:0,84,1004	0/0:21,0:21:54.17:0,54,650	0/0:33,0:31:84.24:0,84,987	0/0:29,0:28:75.21:0,75,888	0/0:17,0:15:42.13:0,42,505	0/0:23,0:20:48.11:0,48,563	0/0:24,0:22:63.13:0,63,732	0/0:16,0:15:45.14:0,45,544	0/0:19,0:19:51.16:0,51,616	1/1:3,6:5:3:29,3,0	0/0:3,0:5:11.90:0,12,123	1/1:2,19:20:57.08:546,57,0	1/1:3,16:17:39:365,39,0	1/1:2,15:15:9.01:87,9,0	0/0:30,0:30:87.25:0,87,1039	0/0:35,0:35:99:0,99,1171	0/0:20,0:19:54.17:0,54,652	0/0:32,0:31:90.24:0,90,1072	1/1:5,27:31:44.94:717,45,0	1/1:3,21:23:39.06:377,39,0	1/1:2,16:14:30.05:290,30,0
chr10	44700526	.	AG	A	1161.58	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-2.511;DP=574;FS=3.436;HRun=1;HaplotypeScore=94.8658;InbreedingCoeff=0.8117;MQ=51.76;MQ0=26;MQRankSum=-0.399;QD=36.30;ReadPosRankSum=-4.074;VQSLOD=2.3291;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:26:63.19:0,63,978	0/0:8,0:5:15.05:0,15,239	0/0:23,0:12:36.10:0,36,536	0/0:21,0:12:27.55:0,28,410	0/0:16,0:13:27.09:0,27,429	0/0:29,0:29:87.28:0,87,1359	0/0:13,0:13:39.13:0,39,624	1/1:0,32:32:90.30:1256,90,0	0/0:27,0:27:81.25:0,81,1270	0/0:27,0:26:70.23:0,70,422	0/0:13,0:10:7.07:0,7,66	0/0:22,0:22:60.20:0,60,959	0/0:19,0:18:54.18:0,54,862	0/0:29,0:29:81.13:0,81,1271	0/0:28,0:28:73.76:0,74,470	0/0:26,0:26:68.80:0,69,439	0/0:5,0:2:6.02:0,6,95	0/0:15,0:14:26.77:0,27,192	0/0:21,0:13:39.12:0,39,599	0/0:11,0:10:27.09:0,27,421	0/0:25,0:22:48.16:0,48,765	0/0:26,0:26:69.23:0,69,1079	0/0:18,0:16:30.09:0,30,456	0/0:28,0:26:57.19:0,57,896	0/0:15,0:15:14.91:0,15,118	0/0:14,0:12:36.12:0,36,574	0/0:25,0:22:66.19:0,66,1005	0/0:8,0:8:24.08:0,24,383
chr10	44700803	.	T	TGGA	683.87	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=2.529;DP=552;FS=8.036;HRun=0;HaplotypeScore=117.6462;InbreedingCoeff=0.9110;MQ=59.96;MQ0=44;MQRankSum=-1.329;QD=13.15;ReadPosRankSum=-1.567;VQSLOD=2.7251;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,117,2039	0/0:12,0:5:12.01:0,12,117	0/0:22,0:21:48.16:0,48,835	0/0:22,0:22:40.07:0,40,756	0/0:21,0:21:60.19:0,60,1061	0/0:17,0:17:51.17:0,51,950	0/0:16,0:16:45.15:0,45,821	0/0:31,0:31:87.28:0,87,1581	0/0:28,0:28:81.25:0,81,1404	1/1:1,7:5:12.01:173,12,0	1/1:0,9:4:9.03:146,9,0	0/0:15,0:15:45.15:0,45,838	0/0:21,0:20:57.18:0,57,1023	0/0:24,0:23:69.24:0,69,1260	1/1:2,9:5:9.64:148,10,0	1/1:1,8:4:9.03:180,9,0	0/0:45,0:44:99:0,121,1094	1/1:0,1:3:9.01:83,9,0	0/0:23,0:22:57.16:0,57,987	0/0:23,0:22:66.20:0,66,1152	0/0:19,0:19:54.14:0,54,928	0/0:23,0:19:54.17:0,54,969	0/0:16,0:15:45.15:0,45,820	0/0:26,0:26:75.24:0,75,1306	1/1:0,7:2:6.02:121,6,0	0/0:19,0:18:54.16:0,54,934	0/0:31,0:25:72.21:0,72,1300	0/0:4,0:4:12.04:0,12,223
chr10	44701025	.	A	AT	2564.75	PASS	AC=32;AF=0.727;AN=44;BaseQRankSum=2.328;DP=353;FS=3.634;HRun=3;HaplotypeScore=33.0830;InbreedingCoeff=0.8246;MQ=44.96;MQ0=93;MQRankSum=-6.632;QD=12.45;ReadPosRankSum=-1.604;VQSLOD=1.4679;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,4:3:9.03:126,9,0	./.	0/0:18,0:16:45.13:0,45,529	0/0:18,0:12:36.11:0,36,426	1/1:3,14:4:6.02:84,6,0	0/0:31,0:31:87.27:0,87,1043	0/0:15,0:15:39.12:0,39,468	0/0:24,0:23:63.19:0,63,756	0/0:19,0:19:54.17:0,54,648	1/1:1,16:10:24.07:318,24,0	1/1:2,19:12:15.01:187,15,0	1/1:0,2:2:6.02:83,6,0	1/1:2,8:8:21.03:261,21,0	./.	1/1:0,7:4:3.01:42,3,0	./.	./.	1/1:2,7:7:15.05:210,15,0	./.	1/1:3,24:13:24.08:335,24,0	./.	1/1:0,19:5:15.05:210,15,0	1/1:1,15:5:9.03:126,9,0	1/1:2,4:5:9.03:126,9,0	1/1:1,15:5:12.04:167,12,0	1/1:3,8:7:12.04:168,12,0	1/1:2,15:8:18.06:252,18,0	1/1:2,3:3:2.80:42,3,0
chr10	44701616	.	T	TAA	5119.19	PASS	AB=0.679;AC=19;AF=0.339;AN=56;BaseQRankSum=-3.746;DP=588;FS=2.686;HRun=11;HaplotypeScore=98.3426;InbreedingCoeff=0.7548;MQ=61.04;MQ0=7;MQRankSum=-1.805;QD=19.46;ReadPosRankSum=-1.103;VQSLOD=4.0841;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,26:28:50.66:704,51,0	0/1:7,1:15:54.82:94,0,55	0/0:18,0:18:29.67:0,30,270	0/0:14,0:11:19.85:0,20,159	1/1:6,13:22:44.12:565,44,0	0/0:24,0:24:46.04:0,46,565	0/0:18,0:19:44.80:0,45,413	0/1:17,0:39:24.26:160,0,24	0/0:19,0:19:38.97:0,39,372	0/0:3,0:22:51.75:0,52,221	0/0:6,0:20:38.38:0,38,166	0/0:15,0:16:35.69:0,36,324	0/0:20,0:21:53.42:0,53,475	0/0:20,0:21:47.79:0,48,447	0/0:3,0:19:38.40:0,38,166	0/0:4,0:24:43.88:0,44,190	0/1:7,4:34:31.71:387,0,32	0/0:0,0:11:24.70:0,25,107	1/1:2,12:14:36.12:521,36,0	1/1:4,29:33:69:1024,69,0	1/1:3,12:15:30.09:419,30,0	0/0:17,0:17:26.93:0,27,311	0/0:17,0:18:32.95:0,33,370	0/0:15,0:15:33.01:0,33,320	0/0:1,0:23:52.13:0,52,225	1/1:3,12:17:29.46:494,29,0	1/1:4,17:25:50.05:577,50,0	1/1:1,4:5:12.04:174,12,0
chr10	44701849	.	TA	T	1059.13	PASS	AB=0.581;AC=13;AF=0.325;AN=40;BaseQRankSum=1.587;DP=687;FS=0.000;HRun=1;HaplotypeScore=27.4558;InbreedingCoeff=0.6221;MQ=16.55;MQ0=411;MQRankSum=-0.918;QD=5.88;ReadPosRankSum=-0.985;VQSLOD=0.0121;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,38:8:3.01:42,3,0	0/0:16,0:9:6.02:0,6,96	./.	./.	1/1:7,22:16:12.04:167,12,0	./.	0/0:30,0:4:3.01:0,3,48	0/0:27,0:3:9.03:0,9,144	0/0:24,0:9:6.02:0,6,96	0/0:28,0:14:39.12:0,39,602	0/0:23,0:13:18.06:0,18,287	./.	0/0:19,0:6:9.03:0,9,141	0/0:20,0:5:9.03:0,9,143	0/0:24,0:5:3.01:0,3,48	0/0:18,0:8:11.87:0,12,191	./.	./.	1/1:5,13:3:9.03:126,9,0	1/1:3,20:14:33.02:407,33,0	./.	0/0:26,0:14:9.03:0,9,143	0/0:28,0:14:9.03:0,9,143	./.	0/0:17,0:15:18.06:0,18,287	0/1:7,18:7:26.79:214,0,27	1/1:5,23:9:9.03:126,9,0	1/1:4,4:3:9.03:126,9,0
chr10	44702331	.	TG	T	462.47	PASS	AB=0.696;AC=2;AF=0.036;AN=56;BaseQRankSum=6.178;DP=645;FS=0.844;HRun=4;HaplotypeScore=70.3179;InbreedingCoeff=-0.0371;MQ=58.14;MQ0=10;MQRankSum=-3.761;QD=7.23;ReadPosRankSum=-0.531;VQSLOD=-0.2172;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,105,1434	0/1:18,13:25:99:267,0,438	0/0:24,0:19:51.13:0,51,681	0/0:25,0:24:66.21:0,66,891	0/0:23,0:23:66.20:0,66,899	0/0:20,0:20:54.18:0,54,755	0/0:12,0:12:36.12:0,36,504	0/0:25,0:25:63.21:0,63,882	0/0:14,0:14:39.13:0,39,546	0/0:32,0:31:81.25:0,81,1092	0/0:19,0:19:57.17:0,57,765	0/0:15,0:15:45.15:0,45,629	0/0:19,0:19:54.17:0,54,733	0/0:24,0:24:66.21:0,66,907	0/0:30,0:30:75.25:0,75,1050	0/0:23,0:23:63.19:0,63,850	0/1:18,15:29:99:284,0,532	0/0:23,0:23:57.19:0,57,796	0/0:24,0:22:66.21:0,66,909	0/0:30,0:30:78.26:0,78,1089	0/0:20,0:20:54.18:0,54,756	0/0:25,0:25:63.20:0,63,862	0/0:22,0:21:54.18:0,54,756	0/0:13,0:13:39.10:0,39,509	0/0:22,0:22:43.45:0,43,858	0/0:27,0:26:75.18:0,75,996	0/0:25,0:25:72.23:0,72,990	0/0:8,0:8:24.08:0,24,336
chr10	44702449	.	CA	C	4790.07	PASS	AB=0.600;AC=15;AF=0.268;AN=56;BaseQRankSum=11.623;DP=581;FS=13.738;HRun=6;HaplotypeScore=76.0896;InbreedingCoeff=0.9079;MQ=65.73;MQ0=3;MQRankSum=-0.089;QD=26.32;ReadPosRankSum=1.022;VQSLOD=3.9942;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:51.15:0,51,656	1/1:5,10:12:27.07:290,27,0	0/0:12,0:12:26.95:0,27,287	0/0:11,0:11:21.83:0,22,272	0/0:27,0:27:75.24:0,75,987	0/0:26,0:26:75.24:0,75,987	0/0:9,0:9:27.09:0,27,355	0/0:23,0:23:66.21:0,66,869	0/0:21,0:21:60.18:0,60,775	1/1:0,35:35:99:1119,105,0	1/1:2,28:27:72.18:774,72,0	0/0:20,0:20:48.14:0,48,614	0/0:12,0:12:36.12:0,36,474	0/0:26,0:26:75.24:0,75,986	1/1:1,20:21:57.14:613,57,0	1/1:2,18:20:51.13:548,51,0	0/1:7,14:18:19.13:286,0,19	1/1:0,8:8:24.06:258,24,0	0/0:17,0:16:36.12:0,36,473	0/0:31,0:31:84.27:0,84,1103	0/0:7,0:7:21.07:0,21,276	0/0:29,0:29:81.26:0,81,1060	0/0:26,0:26:75.21:0,75,967	0/0:19,0:19:48.16:0,48,632	1/1:1,31:30:84.21:903,84,0	0/0:27,0:27:81.26:0,81,1065	0/0:24,0:24:72.22:0,72,932	0/0:13,0:13:39.13:0,39,513
chr10	44702547	.	G	GTTGCACCA	1293.77	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=1.803;DP=671;FS=18.984;HRun=0;HaplotypeScore=194.5180;InbreedingCoeff=0.9875;MQ=78.27;MQ0=3;MQRankSum=-5.668;QD=64.69;ReadPosRankSum=0.679;VQSLOD=1.9743;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:84.23:0,84,2194	1/1:2,7:7:18.06:741,18,0	0/0:29,0:29:75.26:0,75,1963	0/0:29,0:30:82.81:0,83,2000	0/0:25,0:24:69.24:0,69,1937	0/0:22,0:22:66.21:0,66,1814	0/0:13,0:13:39.08:0,39,952	0/0:33,0:33:93.31:0,93,2422	0/0:27,0:27:78.27:0,78,2191	0/0:32,0:32:90.30:0,90,2525	0/0:28,0:27:78.27:0,78,2154	0/0:25,0:25:75.24:0,75,1960	0/0:26,0:26:78.27:0,78,2233	0/0:30,0:30:87.28:0,87,2380	0/0:25,0:25:75.25:0,75,2089	0/0:26,0:26:75.26:0,75,2100	1/1:2,8:6:15.05:669,15,0	0/0:14,0:14:42.14:0,42,1199	0/0:21,0:21:63.22:0,63,1715	0/0:27,0:25:72.25:0,72,2042	0/0:25,0:25:69.23:0,69,1899	0/0:31,0:31:90.31:0,90,2476	0/0:26,0:26:72.25:0,72,2061	0/0:19,0:19:57.14:0,57,1441	0/0:18,0:18:54.17:0,54,1364	0/0:23,0:23:66.23:0,66,1889	0/0:28,0:27:78.27:0,78,2144	0/0:15,0:15:39.13:0,39,1071
chr10	44703000	.	TA	T	97.60	PASS	AC=6;AF=0.130;AN=46;BaseQRankSum=0.695;DP=388;FS=3.357;HRun=4;HaplotypeScore=50.3213;InbreedingCoeff=0.6440;MQ=44.62;MQ0=50;MQRankSum=-2.809;QD=4.65;ReadPosRankSum=0.795;VQSLOD=-0.1738;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	1/1:3,2:4:8.82:84,9,0	0/0:10,0:9:23.87:0,24,255	0/0:3,0:3:2.56:0,3,21	./.	0/0:18,0:18:54.17:0,54,721	0/0:12,0:12:33.10:0,33,430	0/0:38,0:32:90.22:0,90,1145	0/0:16,0:16:48.13:0,48,623	0/0:32,0:30:84.21:0,84,1045	0/0:24,0:23:45.05:0,45,556	0/0:11,0:9:9.03:0,9,122	0/0:11,0:8:3.01:0,3,41	0/0:19,0:16:20.93:0,21,225	0/0:14,0:8:15.05:0,15,198	0/0:12,0:12:27.04:0,27,331	1/1:6,3:8:9.03:107,9,0	0/0:15,0:12:9.03:0,9,122	0/0:6,0:2:6.01:0,6,64	./.	./.	0/0:17,0:13:33.09:0,33,419	0/0:26,0:24:48.09:0,48,607	0/0:13,0:6:12.04:0,12,157	0/0:18,0:17:51.06:0,51,647	1/1:7,0:2:2.97:20,3,0	./.	0/0:8,0:1:3.01:0,3,41
chr10	44703228	.	G	GGA	1404.60	PASS	AC=14;AF=0.280;AN=50;BaseQRankSum=7.861;DP=523;FS=11.209;HRun=0;HaplotypeScore=60.4345;InbreedingCoeff=0.9120;MQ=55.10;MQ0=24;MQRankSum=-2.957;QD=16.14;ReadPosRankSum=-3.324;VQSLOD=1.8020;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,3:2:3.01:58,3,0	1/1:4,14:10:24.08:459,24,0	0/0:32,0:15:41.79:0,42,501	0/0:18,0:8:24.08:0,24,354	1/1:3,16:11:15.05:289,15,0	0/0:34,0:34:99:0,99,1489	0/0:13,0:13:39.10:0,39,570	0/0:23,0:23:63.20:0,63,944	0/0:31,0:31:69.09:0,69,955	0/0:32,0:32:93.29:0,93,1382	0/0:29,0:29:84.24:0,84,1252	0/0:22,0:22:60.09:0,60,842	0/0:19,0:19:51.17:0,51,773	0/0:29,0:29:75.21:0,75,1121	0/0:23,0:23:66.18:0,66,984	0/0:14,0:14:39.08:0,39,552	1/1:2,3:2:6.02:111,6,0	0/0:10,0:9:21.07:0,21,320	./.	1/1:4,22:11:18.06:343,18,0	./.	0/0:23,0:21:60.20:0,60,918	0/0:29,0:29:78.26:0,78,1193	0/0:20,0:20:51.13:0,51,754	0/0:22,0:21:54.17:0,54,806	1/1:0,9:4:12.04:203,12,0	1/1:0,7:2:6.02:116,6,0	./.
chr10	44703312	.	TA	T	788.77	PASS	AB=0.714;AC=13;AF=0.250;AN=52;BaseQRankSum=10.715;DP=533;FS=12.350;HRun=1;HaplotypeScore=62.7159;InbreedingCoeff=0.8321;MQ=47.57;MQ0=36;MQRankSum=-7.585;QD=6.68;ReadPosRankSum=0.602;VQSLOD=-0.7277;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,13:9:23.74:182,24,0	0/0:3,2:5:6.02:0,6,96	0/0:34,0:10:30.10:0,30,439	0/0:23,0:5:15.01:0,15,190	1/1:3,16:11:11.75:72,12,0	0/0:26,0:26:78.27:0,78,1240	0/0:19,0:19:54.18:0,54,863	0/0:22,0:22:62.86:0,63,953	0/0:24,0:24:69.22:0,69,1074	0/0:35,0:32:99:0,99,1547	0/0:22,0:22:54.18:0,54,860	0/0:17,0:16:42.14:0,42,670	0/0:30,0:29:81.05:0,81,1269	0/0:17,0:17:51.15:0,51,768	0/0:16,0:16:48.16:0,48,767	0/0:17,0:17:51.17:0,51,812	0/1:6,4:7:7.56:8,0,175	0/0:15,0:14:36.12:0,36,575	./.	1/1:1,23:11:26.33:162,26,0	1/1:1,7:4:1:60,1,0	0/0:20,0:19:48.14:0,48,739	0/0:22,0:21:60.20:0,60,957	0/0:17,0:17:45.09:0,45,666	0/0:21,0:21:57.14:0,57,847	1/1:1,19:9:23.91:212,24,0	1/1:1,20:16:29.65:268,30,0	./.
chr10	44703315	.	A	AAC	1940.89	PASS	AB=0.706;AC=15;AF=0.278;AN=54;BaseQRankSum=11.587;DP=555;FS=18.920;HRun=0;HaplotypeScore=67.8855;InbreedingCoeff=0.8301;MQ=45.86;MQ0=40;MQRankSum=-7.298;QD=13.96;ReadPosRankSum=-0.501;VQSLOD=1.7762;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,13:11:24.08:333,24,0	0/0:4,2:6:6.02:0,6,98	0/0:32,0:7:21.06:0,21,307	0/0:23,0:2:6.02:0,6,98	1/1:9,16:15:14.96:165,15,0	0/0:26,0:26:78.25:0,78,1246	0/0:19,0:19:54.18:0,54,880	0/0:21,0:21:59.80:0,60,925	0/0:24,0:24:69.23:0,69,1110	0/0:38,0:35:99:0,108,1729	0/0:21,0:21:54.16:0,54,879	0/0:18,0:17:45.15:0,45,727	0/0:30,0:29:81.11:0,81,1292	0/0:17,0:17:51.17:0,51,826	0/0:16,0:16:48.16:0,48,782	0/0:18,0:18:54.17:0,54,856	0/1:7,4:8:69.18:69,0,177	0/0:16,0:14:39.09:0,39,607	./.	1/1:1,23:11:26.89:332,27,0	1/1:1,7:4:12.03:153,12,0	0/0:20,0:18:45.15:0,45,732	0/0:23,0:21:60.20:0,60,978	0/0:16,0:16:42.10:0,42,656	0/0:22,0:22:57.16:0,57,878	1/1:3,19:12:27.02:382,27,0	1/1:5,20:19:51.06:651,51,0	1/1:2,3:1:3.01:44,3,0
chr10	44703345	.	T	TA	466.13	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=4.781;DP=607;FS=3.058;HRun=8;HaplotypeScore=78.6920;InbreedingCoeff=0.8497;MQ=49.51;MQ0=42;MQRankSum=0.320;QD=11.65;ReadPosRankSum=-0.682;VQSLOD=2.8995;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:13:20.92:0,21,181	1/1:1,7:7:9.03:104,9,0	0/0:27,0:3:6:0,6,55	0/0:19,0:3:5.99:0,6,51	0/0:32,0:26:45.02:0,45,407	0/0:29,0:29:75.01:0,75,677	0/0:15,0:15:36.02:0,36,329	0/0:23,0:22:63.02:0,63,573	0/0:24,0:24:47.97:0,48,427	0/0:37,0:36:71.89:0,72,849	0/0:22,0:22:44.94:0,45,399	0/0:18,0:17:45:0,45,407	0/0:29,0:28:81.01:0,81,730	0/0:16,0:16:42.01:0,42,380	0/0:19,0:19:48.02:0,48,439	0/0:17,0:17:48.01:0,48,432	1/1:16,16:26:50.67:476,51,0	0/0:18,0:17:48.01:0,48,433	0/0:14,0:8:21:0,21,192	0/0:27,0:17:29.85:0,30,262	0/0:10,0:6:17.99:0,18,159	0/0:25,0:22:42.02:0,42,384	0/0:25,0:23:42.02:0,42,383	0/0:19,0:19:47.98:0,48,429	0/0:22,0:22:54.03:0,54,494	0/0:27,0:19:54.02:0,54,494	0/0:27,0:22:57.03:0,57,521	0/0:7,0:5:11.87:0,12,85
chr10	44703597	.	T	TG	866.62	PASS	AB=1.000;AC=12;AF=0.231;AN=52;BaseQRankSum=4.242;DP=642;FS=1.923;HRun=1;HaplotypeScore=84.3480;InbreedingCoeff=0.4319;MQ=44.29;MQ0=74;MQRankSum=-0.063;QD=4.25;ReadPosRankSum=2.868;VQSLOD=0.6245;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:23:36.36:0,36,143	1/1:8,4:5:6.02:89,6,0	./.	./.	0/0:31,0:23:30.21:0,30,154	0/0:22,0:21:45.10:0,45,537	0/0:17,0:15:39.11:0,39,484	0/0:27,0:25:66.10:0,66,786	0/0:26,0:24:60.15:0,60,718	1/1:38,0:36:3.22:191,3,0	0/1:28,0:27:73.72:86,0,74	0/0:18,0:16:24.08:0,24,310	0/0:27,0:27:60.15:0,60,721	0/0:15,0:14:27.07:0,27,325	0/1:23,0:22:18.74:54,0,19	1/1:17,0:17:2.70:86,3,0	1/1:31,6:24:23.54:298,24,0	0/1:21,0:20:29.28:78,0,29	0/0:36,0:24:64.29:0,64,312	0/0:28,0:19:30.45:0,30,169	0/0:14,0:12:9.53:0,10,36	0/0:25,0:20:45.13:0,45,556	0/0:33,0:30:63.14:0,63,740	0/0:8,0:8:15.05:0,15,194	0/1:28,0:25:26.71:136,0,27	0/0:17,0:16:41.98:0,42,196	0/0:33,0:31:61.17:0,61,257	0/0:12,0:7:15.45:0,15,74
chr10	44703598	.	G	GT	5049.23	PASS	AC=32;AF=0.615;AN=52;BaseQRankSum=4.133;DP=653;FS=17.381;HRun=8;HaplotypeScore=72.0368;InbreedingCoeff=0.9667;MQ=44.14;MQ0=76;MQRankSum=1.013;QD=12.29;ReadPosRankSum=1.982;VQSLOD=2.6949;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,0:23:42.65:217,43,0	1/1:7,5:5:5.98:47,6,0	./.	./.	1/1:9,2:27:32.46:174,32,0	0/0:22,0:21:39.01:0,39,356	0/0:17,0:15:36.02:0,36,329	0/0:26,0:24:57.01:0,57,519	0/0:27,0:25:50.99:0,51,461	1/1:5,33:36:96.27:1097,96,0	1/1:6,23:28:25.73:416,26,0	0/0:17,0:15:26.99:0,27,238	0/0:27,0:27:48.02:0,48,439	0/0:15,0:14:24.01:0,24,220	1/1:2,21:22:27.08:312,27,0	1/1:1,16:17:30.09:346,30,0	1/1:19,18:24:9.81:239,10,0	1/1:3,18:20:36.11:415,36,0	1/1:11,0:26:68.48:360,68,0	1/1:6,2:22:28.53:149,29,0	1/1:2,0:12:14.33:77,14,0	0/0:24,0:19:42.02:0,42,384	0/0:33,0:30:47.84:0,48,436	0/0:8,0:8:15.01:0,15,137	1/1:4,24:25:51.15:588,51,0	1/1:1,0:16:42.74:222,43,0	1/1:5,0:30:62.40:315,62,0	1/1:4,1:9:14.27:73,14,0
chr10	44703636	.	G	GA	387.52	PASS	AB=0.736;AC=2;AF=0.038;AN=52;BaseQRankSum=5.287;DP=695;FS=4.237;HRun=2;HaplotypeScore=84.3500;InbreedingCoeff=-0.0403;MQ=44.95;MQ0=84;MQRankSum=0.144;QD=8.42;ReadPosRankSum=1.039;VQSLOD=1.2562;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:38:81.24:0,81,1031	0/1:14,6:14:62.79:116,0,63	./.	./.	0/0:31,0:24:51.17:0,51,657	0/0:21,0:20:45.13:0,45,570	0/0:13,0:10:27.09:0,27,350	0/0:29,0:18:48.16:0,48,622	0/0:34,0:32:84.27:0,84,1089	0/0:28,0:27:75.24:0,75,972	0/0:28,0:27:48.15:0,48,620	0/0:27,0:25:54.06:0,54,701	0/0:27,0:27:66.20:0,66,836	0/0:25,0:24:54.16:0,54,684	0/0:20,0:19:36.10:0,36,453	0/0:20,0:20:45.06:0,45,584	0/1:15,11:16:41.64:360,0,42	0/0:15,0:15:33.11:0,33,425	0/0:26,0:22:60.19:0,60,776	0/0:30,0:22:44.96:0,45,545	0/0:23,0:22:51.15:0,51,646	0/0:31,0:25:69.20:0,69,866	0/0:33,0:29:60.18:0,60,763	0/0:9,0:9:18.06:0,18,232	0/0:30,0:27:72.22:0,72,918	0/0:16,0:15:42.13:0,42,533	0/0:30,0:29:75.17:0,75,952	0/0:23,0:18:48.16:0,48,623
chr10	44704803	.	CCA	C	6270.26	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-1.848;DP=715;FS=0.000;HRun=0;HaplotypeScore=136.3894;InbreedingCoeff=0.9522;MQ=68.38;MQ0=27;MQRankSum=5.314;QD=39.69;ReadPosRankSum=4.815;VQSLOD=5.8670;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:45:99:0,129,2221	0/0:18,0:15:36.12:0,36,656	0/0:36,0:32:93:0,93,1564	0/0:36,0:31:82.62:0,83,1413	0/0:23,0:23:57.04:0,57,955	0/0:14,0:14:42.13:0,42,754	0/0:32,0:32:90.29:0,90,1639	0/0:29,0:28:72.15:0,72,1272	0/0:35,0:35:99:0,105,1867	0/0:19,0:13:39.13:0,39,728	0/0:14,0:13:12.04:0,12,223	1/1:1,31:31:84.28:1236,84,0	1/1:1,20:21:60.20:882,60,0	1/1:0,32:31:81.11:1192,81,0	0/0:20,0:14:24.08:0,24,447	0/0:11,0:9:12.04:0,12,224	0/0:36,0:32:72.17:0,72,1275	0/0:4,0:2:3.01:0,3,39	0/0:19,0:17:51.16:0,51,893	0/0:25,0:25:75.26:0,75,1341	0/0:62,0:61:99:0,175,3049	1/1:1,32:33:96.32:1414,96,0	1/1:0,17:17:45.15:662,45,0	1/1:0,23:23:60.20:883,60,0	0/0:15,0:8:21.06:0,21,391	0/0:23,0:23:69.24:0,69,1241	0/0:24,0:22:66.23:0,66,1162	0/0:15,0:15:45.15:0,45,808
chr10	44704934	.	G	GC	91.87	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=2.896;DP=682;FS=0.000;HRun=1;HaplotypeScore=101.7161;InbreedingCoeff=0.8794;MQ=64.36;MQ0=10;MQRankSum=-3.654;QD=4.84;ReadPosRankSum=-0.492;VQSLOD=-0.0577;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:31:90.24:0,90,1135	1/1:0,8:2:3.01:43,3,0	0/0:22,0:18:51.16:0,51,651	0/0:32,0:31:93.27:0,93,1140	0/0:22,0:22:54.12:0,54,681	0/0:18,0:18:54.18:0,54,701	0/0:30,0:30:87.27:0,87,1115	0/0:27,0:27:81.23:0,81,1012	0/0:18,0:18:54.18:0,54,701	0/0:28,1:26:75.24:0,75,961	0/0:13,1:13:33.07:0,33,428	0/0:31,0:31:90.27:0,90,1141	0/0:26,0:26:75.24:0,75,973	0/0:25,0:25:72.17:0,72,886	0/0:30,0:25:72.23:0,72,934	0/0:26,0:24:72.20:0,72,916	1/1:2,9:6:12.01:151,12,0	0/0:21,0:20:57.19:0,57,739	0/0:27,0:27:78.25:0,78,1013	0/0:22,0:22:63.20:0,63,817	0/0:44,0:44:99:0,123,1594	0/0:19,0:19:54.17:0,54,690	0/0:18,0:18:48.16:0,48,623	0/0:43,0:43:99:0,126,1621	0/0:21,1:21:60.20:0,60,779	0/0:25,0:24:66.21:0,66,857	0/0:31,1:31:90.28:0,90,1154	0/0:6,0:6:18.06:0,18,234
chr10	44705645	.	T	TC	345.59	PASS	AB=0.571;AC=3;AF=0.054;AN=56;BaseQRankSum=5.477;DP=563;FS=0.000;HRun=3;HaplotypeScore=60.1840;InbreedingCoeff=0.5296;MQ=53.90;MQ0=35;MQRankSum=-4.207;QD=20.33;ReadPosRankSum=-0.858;VQSLOD=2.9726;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:45.14:0,45,539	1/1:3,6:9:21.04:265,21,0	0/0:21,0:3:2.90:0,3,16	0/0:19,0:5:6.01:0,6,66	0/0:31,0:31:84.25:0,84,998	0/0:34,0:34:96.26:0,96,1116	0/0:10,0:10:30.08:0,30,349	0/0:31,0:27:69.18:0,69,792	0/0:23,0:23:69.18:0,69,804	0/0:25,0:23:66.18:0,66,759	0/0:31,0:28:72.22:0,72,860	0/0:17,0:11:27.08:0,27,315	0/0:12,0:9:27.08:0,27,323	0/0:21,0:18:45.14:0,45,539	0/0:21,0:21:60.07:0,60,657	0/0:23,0:22:63.19:0,63,755	0/1:2,6:7:17.79:185,0,18	0/0:15,0:15:33.10:0,33,396	0/0:17,0:12:30.06:0,30,344	0/0:31,0:30:78.23:0,78,925	0/0:15,0:15:36.11:0,36,431	0/0:23,0:22:60.18:0,60,719	0/0:14,0:10:18.05:0,18,216	0/0:8,0:7:12.04:0,12,144	0/0:21,0:21:54.17:0,54,647	0/0:25,0:23:66.19:0,66,773	0/0:30,0:30:87.27:0,87,1040	0/0:9,0:9:27.07:0,27,313
chr10	44705676	.	CTAA	C	325.45	PASS	AB=0.675;AC=2;AF=0.037;AN=54;BaseQRankSum=4.677;DP=529;FS=10.593;HRun=0;HaplotypeScore=73.8095;InbreedingCoeff=-0.0482;MQ=50.49;MQ0=21;MQRankSum=-4.293;QD=12.05;ReadPosRankSum=0.467;VQSLOD=2.3706;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:48.16:0,48,1134	0/1:3,6:9:99:292,0,117	0/0:26,0:1:3.01:0,3,66	./.	0/0:29,0:29:84.17:0,84,1837	0/0:30,0:30:90.28:0,90,1996	0/0:9,0:9:27.08:0,27,593	0/0:26,0:23:66.23:0,66,1480	0/0:20,0:20:60.19:0,60,1372	0/0:23,0:20:57.14:0,57,1294	0/0:31,0:28:78.16:0,78,1788	0/0:14,0:8:18.06:0,18,425	0/0:11,0:8:18.06:0,18,403	0/0:20,0:14:36.12:0,36,830	0/0:13,0:13:39.13:0,39,900	0/0:20,0:19:57.18:0,57,1301	0/1:12,6:16:99:122,0,461	0/0:14,0:13:39.13:0,39,921	0/0:14,0:14:39.13:0,39,900	0/0:26,0:25:69.16:0,69,1535	0/0:17,0:17:45.15:0,45,1061	0/0:18,0:16:39.10:0,39,764	0/0:14,0:7:12.04:0,12,284	0/0:7,0:5:12.04:0,12,283	0/0:22,0:22:63.22:0,63,1471	0/0:26,0:23:69.24:0,69,1632	0/0:28,0:28:84.27:0,84,1938	0/0:11,0:11:30.07:0,30,617
chr10	44705813	.	G	GA	10112.21	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=4.238;DP=495;FS=0.359;HRun=1;HaplotypeScore=71.7032;InbreedingCoeff=0.9511;MQ=67.30;MQ0=13;MQRankSum=-5.802;QD=37.87;ReadPosRankSum=1.442;VQSLOD=5.4178;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,17:17:39.13:622,39,0	1/1:0,8:2:3.01:48,3,0	0/0:21,0:16:44.71:0,45,607	0/0:14,0:8:24.03:0,24,307	1/1:1,27:24:54.18:849,54,0	0/0:25,0:25:75.23:0,75,1026	0/0:7,0:7:21.07:0,21,294	0/0:28,0:28:75.25:0,75,1047	0/0:18,0:18:54.18:0,54,748	1/1:0,14:13:39.13:623,39,0	1/1:1,18:16:45.15:716,45,0	0/0:17,0:13:39.13:0,39,545	0/0:12,0:10:26.94:0,27,377	0/0:26,0:22:66.22:0,66,919	1/1:1,14:15:42.14:668,42,0	1/1:0,12:12:36.12:576,36,0	1/1:0,10:8:5.62:80,6,0	1/1:0,15:15:39.13:612,39,0	1/1:0,16:14:42.14:658,42,0	1/1:0,20:19:54.18:838,54,0	1/1:0,20:20:51.08:815,51,0	0/0:22,0:22:63.21:0,63,881	0/0:23,0:20:54.18:0,54,755	0/0:15,0:14:42.12:0,42,569	1/1:0,15:14:39.13:621,39,0	1/1:1,22:22:63.17:974,63,0	1/1:1,30:30:81.27:1269,81,0	1/1:0,4:4:9.03:144,9,0
chr10	44705977	.	AGTGT	A	265.19	PASS	AB=0.993;AC=11;AF=0.196;AN=56;BaseQRankSum=5.997;DP=524;FS=10.485;HRun=0;HaplotypeScore=153.4157;InbreedingCoeff=0.2153;MQ=45.06;MQ0=16;MQRankSum=-4.280;QD=1.87;ReadPosRankSum=2.326;VQSLOD=2.2926;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:19,0:19:10.60:11,0,50	1/1:6,2:4:3:25,3,0	0/0:30,0:18:47.11:0,47,451	0/0:25,0:10:20.38:0,20,181	0/1:17,0:10:12.85:13,0,28	0/0:19,0:19:54.09:0,54,1130	0/0:18,0:18:48.08:0,48,820	0/0:46,0:45:99:0,117,1065	0/0:22,0:22:36.95:0,37,1060	0/0:31,0:27:62.82:0,63,710	0/0:22,0:19:5.70:0,6,58	0/0:18,0:17:38.79:0,39,404	0/0:21,0:20:13.52:0,14,97	0/0:20,0:17:41.95:0,42,433	0/1:18,0:18:9.04:9,0,18	0/1:7,0:7:1.05:10,0,1	1/1:8,5:14:23.88:304,24,0	0/0:16,0:16:20.71:0,21,198	0/0:21,0:18:23.85:0,24,284	0/1:24,0:19:7.11:7,0,106	0/0:10,0:10:14.96:0,15,120	0/0:16,0:14:2.99:0,3,24	0/0:18,0:11:17.70:0,18,173	0/0:9,0:9:12.01:0,12,167	0/1:17,0:16:1.13:1,0,145	0/0:18,0:17:8.84:0,9,229	0/1:16,0:15:25.79:26,0,52	0/0:2,0:2:5.94:0,6,42
chr10	44705984	.	G	GTGTGTGTA	2727.50	PASS	AB=0.839;AC=17;AF=0.315;AN=54;BaseQRankSum=4.705;DP=544;FS=6.524;HRun=0;HaplotypeScore=184.2186;InbreedingCoeff=0.3918;MQ=45.05;MQ0=15;MQRankSum=-6.028;QD=11.27;ReadPosRankSum=-3.893;VQSLOD=1.4288;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:18:15.85:0,16,128	0/0:9,0:5:3:0,3,25	0/0:30,0:18:50.86:0,51,447	0/0:22,0:10:18.21:0,18,173	0/0:7,0:14:11.96:0,12,120	0/0:19,0:19:54.11:0,54,1129	0/0:18,0:18:51.02:0,51,663	0/1:57,0:55:99:351,0,681	0/0:24,0:24:66.09:0,66,1164	1/1:29,2:26:62.98:907,63,0	0/1:2,21:21:17.93:125,0,18	0/1:14,0:18:71.01:272,0,71	1/1:2,0:22:12.13:182,12,0	0/0:15,0:18:0.73:0,1,141	1/1:2,15:19:3.01:91,3,0	1/1:0,7:8:6.02:155,6,0	0/0:17,0:16:13.73:0,14,276	1/1:14,0:14:4.79:279,5,0	0/0:15,0:18:41.27:0,41,370	0/0:7,0:19:26.98:0,27,271	0/0:10,0:10:5.98:0,6,48	./.	0/1:13,0:9:40.22:40,0,56	0/1:12,0:11:12.53:13,0,62	1/1:2,16:19:12.04:485,12,0	0/0:4,0:15:38.85:0,39,399	0/0:4,0:14:21.02:0,21,297	0/0:2,0:2:5.96:0,6,44
chr10	44706109	.	T	TA	7714.87	PASS	AB=0.933;AC=42;AF=0.750;AN=56;BaseQRankSum=10.415;DP=433;FS=44.345;HRun=0;HaplotypeScore=78.1309;InbreedingCoeff=0.7812;MQ=71.42;MQ0=27;MQRankSum=-7.481;QD=26.15;ReadPosRankSum=5.479;VQSLOD=2.3566;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,18:18:48.12:654,48,0	0/1:11,2:12:10.86:72,0,11	0/0:20,0:20:60.20:0,60,826	0/0:22,0:22:60.19:0,60,802	1/1:1,19:14:36.11:487,36,0	0/0:19,0:19:54.18:0,54,755	0/0:25,0:25:75.24:0,75,1032	0/0:29,0:29:87.29:0,87,1217	0/0:23,0:23:69.23:0,69,965	1/1:1,12:8:24.02:304,24,0	1/1:0,13:11:30.08:399,30,0	1/1:0,16:12:33.11:460,33,0	1/1:0,18:16:42.14:591,42,0	1/1:1,11:10:27.09:382,27,0	1/1:2,7:7:18.02:229,18,0	1/1:1,6:4:9.02:128,9,0	0/1:22,0:21:16.72:21,0,17	1/1:0,7:6:15.05:218,15,0	1/1:0,5:5:12.01:151,12,0	1/1:0,10:10:27.09:388,27,0	1/1:0,13:13:36.12:515,36,0	1/1:0,20:19:42.14:592,42,0	1/1:0,16:14:39.13:547,39,0	1/1:0,11:10:24.08:340,24,0	1/1:0,14:11:33.11:450,33,0	1/1:1,10:8:21.06:303,21,0	1/1:2,18:13:28.92:399,29,0	1/1:0,3:3:6.02:86,6,0
chr10	44706110	.	G	GC	9276.99	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=12.964;DP=433;FS=18.984;HRun=1;HaplotypeScore=72.5169;InbreedingCoeff=0.9602;MQ=71.35;MQ0=27;MQRankSum=-6.927;QD=31.34;ReadPosRankSum=4.718;VQSLOD=3.2796;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:18:48.12:673,48,0	1/1:2,11:12:30.10:447,30,0	0/0:19,0:19:54.17:0,54,697	0/0:22,0:22:60.16:0,60,738	1/1:21,0:14:36.11:525,36,0	0/0:20,0:20:54.18:0,54,701	0/0:24,0:24:72.23:0,72,935	0/0:29,0:29:87.28:0,87,1118	0/0:23,0:23:69.22:0,69,894	1/1:15,0:8:24.07:325,24,0	1/1:14,0:11:30.10:437,30,0	1/1:16,0:12:33.11:480,33,0	1/1:18,0:16:42.14:609,42,0	1/1:13,0:10:27.09:392,27,0	1/1:9,0:7:18.03:241,18,0	1/1:7,0:4:12.03:156,12,0	1/1:0,22:21:57.19:854,57,0	1/1:7,0:6:15.05:215,15,0	1/1:5,0:5:12.01:151,12,0	1/1:9,0:9:27.09:391,27,0	1/1:12,0:12:36.11:504,36,0	1/1:21,0:20:42.14:608,42,0	1/1:16,0:14:39.13:566,39,0	1/1:11,0:10:24.08:347,24,0	1/1:14,0:11:33.11:482,33,0	1/1:11,0:8:24.07:328,24,0	1/1:19,1:13:33.09:460,33,0	1/1:3,0:3:6.02:87,6,0
chr10	44707156	.	AC	A	93.02	PASS	AB=0.727;AC=1;AF=0.018;AN=56;BaseQRankSum=3.793;DP=588;FS=0.000;HRun=1;HaplotypeScore=54.8863;InbreedingCoeff=-0.0199;MQ=58.59;MQ0=22;MQRankSum=-2.623;QD=5.81;ReadPosRankSum=0.475;VQSLOD=0.2852;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:51.17:0,51,814	0/0:4,2:4:12.04:0,12,191	0/0:18,0:9:24.08:0,24,383	0/0:12,0:8:15.72:0,16,207	0/0:43,0:33:99:0,99,1574	0/0:30,0:30:83.43:0,83,1336	0/0:16,0:16:48.14:0,48,721	0/0:43,0:43:99:0,126,2012	0/0:13,0:13:36.12:0,36,576	0/0:33,0:31:93.30:0,93,1463	0/0:19,0:14:42.14:0,42,671	0/0:22,0:22:66.23:0,66,1052	0/0:23,0:23:69.24:0,69,1103	0/0:22,0:22:66.23:0,66,1053	0/0:18,0:18:54.18:0,54,863	0/0:18,0:18:54.15:0,54,814	0/1:10,6:15:99:167,0,388	0/0:10,0:10:24.08:0,24,383	0/0:24,0:24:68.61:0,69,1063	0/0:24,0:21:60.20:0,60,948	0/0:16,0:16:48.16:0,48,767	0/0:23,0:19:54.14:0,54,814	0/0:24,0:23:69.24:0,69,1103	0/0:21,0:21:60.20:0,60,959	0/0:13,0:11:33.09:0,33,501	0/0:23,0:21:63.20:0,63,984	0/0:18,0:18:54.18:0,54,857	0/0:21,0:20:60.20:0,60,952
chr10	44707187	.	G	GC	346.88	PASS	AB=0.818;AC=5;AF=0.089;AN=56;BaseQRankSum=5.602;DP=539;FS=5.499;HRun=1;HaplotypeScore=51.2816;InbreedingCoeff=0.7100;MQ=68.44;MQ0=4;MQRankSum=-5.368;QD=15.77;ReadPosRankSum=-0.749;VQSLOD=3.0859;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,1:19:9.32:0,9,617	1/1:1,5:4:12.04:180,12,0	0/0:12,0:11:32.75:0,33,374	0/0:16,0:15:39.13:0,39,501	0/0:33,1:30:87.28:0,87,1127	0/0:30,0:30:90.29:0,90,1168	0/0:10,0:10:30.10:0,30,389	0/0:28,0:28:78.25:0,78,1013	0/0:20,0:20:54.18:0,54,701	0/0:30,0:30:90.28:0,90,1144	0/0:19,0:17:48.16:0,48,623	0/0:19,0:19:57.19:0,57,740	0/0:18,0:18:54.16:0,54,687	0/0:27,0:27:78.25:0,78,1012	0/0:19,0:19:51.15:0,51,647	0/0:14,0:14:42.14:0,42,545	1/1:1,6:6:17.97:219,18,0	0/1:7,2:9:71.78:72,0,138	0/0:24,0:22:63.20:0,63,818	0/0:22,0:21:60.15:0,60,759	0/0:14,1:15:39.13:0,39,506	0/0:18,0:18:48.16:0,48,623	0/0:22,0:22:63.19:0,63,803	0/0:14,2:16:42.61:0,43,546	0/0:18,0:18:51.17:0,51,662	0/0:25,0:22:66.21:0,66,857	0/0:22,0:21:63.20:0,63,817	0/0:19,1:19:6.22:0,6,575
chr10	44707195	.	A	AC	223.37	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=4.442;DP=535;FS=6.553;HRun=2;HaplotypeScore=51.3328;InbreedingCoeff=0.7459;MQ=67.46;MQ0=3;MQRankSum=-4.959;QD=11.76;ReadPosRankSum=-0.720;VQSLOD=1.4339;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:18.27:0,18,528	1/1:0,5:4:12.04:172,12,0	0/0:15,0:11:30.09:0,30,368	0/0:15,0:14:36.11:0,36,445	0/0:34,0:29:81.25:0,81,1004	0/0:30,0:30:84.26:0,84,1041	0/0:10,0:10:27.07:0,27,322	0/0:28,0:28:81.24:0,81,991	0/0:20,0:20:54.17:0,54,669	0/0:27,0:27:81.25:0,81,1004	0/0:21,0:19:54.17:0,54,670	0/0:19,0:19:51.16:0,51,632	0/0:14,0:14:42.13:0,42,521	0/0:26,0:26:78.23:0,78,955	0/0:19,0:19:48.15:0,48,595	0/0:14,0:14:42.13:0,42,520	1/1:1,5:5:11.99:136,12,0	0/1:8,0:8:35.77:36,0,165	0/0:26,0:25:67.76:0,68,819	0/0:21,0:20:60.19:0,60,743	0/0:15,0:15:42.11:0,42,506	0/0:20,0:20:57.13:0,57,658	0/0:20,0:20:57.18:0,57,706	0/0:17,0:17:39.58:0,40,471	0/0:20,0:20:57.18:0,57,706	0/0:25,0:21:63.20:0,63,781	0/0:24,0:23:66.21:0,66,818	0/0:17,0:16:42.09:0,42,503
chr10	44707196	.	C	CA	135.15	PASS	AB=0.829;AC=4;AF=0.071;AN=56;BaseQRankSum=5.218;DP=528;FS=6.551;HRun=1;HaplotypeScore=49.9184;InbreedingCoeff=0.4470;MQ=67.76;MQ0=2;MQRankSum=-4.327;QD=7.11;ReadPosRankSum=-1.260;VQSLOD=0.0909;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,1:19:3.32:0,3,601	1/1:5,0:4:11.92:91,12,0	0/0:14,0:10:30.09:0,30,397	0/0:15,0:14:36.12:0,36,503	0/0:33,0:29:81.27:0,81,1132	0/0:30,0:30:90.27:0,90,1224	0/0:10,0:10:30.09:0,30,401	0/0:27,0:27:81.27:0,81,1131	0/0:20,0:20:54.18:0,54,755	0/0:27,0:27:81.27:0,81,1133	0/0:21,0:19:57.18:0,57,781	0/0:17,0:17:51.17:0,51,713	0/0:15,0:15:42.14:0,42,587	0/0:26,0:26:78.26:0,78,1089	0/0:19,0:19:51.16:0,51,696	0/0:14,0:14:42.14:0,42,587	0/1:5,1:5:7.92:83,0,8	0/1:6,2:8:71.67:72,0,209	0/0:27,0:26:75.22:0,75,1005	0/0:21,0:20:60.20:0,60,838	0/0:14,1:15:42.14:0,42,585	0/0:21,0:21:57.19:0,57,791	0/0:19,0:19:57.19:0,57,796	0/0:15,1:16:45.60:0,46,597	0/0:19,0:19:57.19:0,57,797	0/0:25,0:21:63.21:0,63,881	0/0:24,0:23:66.22:0,66,922	0/0:15,0:14:42.14:0,42,582
chr10	44707472	.	A	AG	1958.82	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=9.960;DP=491;FS=1.075;HRun=1;HaplotypeScore=73.2629;InbreedingCoeff=0.9086;MQ=51.45;MQ0=38;MQRankSum=-2.377;QD=18.14;ReadPosRankSum=-1.006;VQSLOD=3.5473;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:9:11.92:0,12,99	0/0:5,0:3:9.03:0,9,116	0/0:17,0:8:23.81:0,24,253	0/0:10,0:3:8.94:0,9,92	0/0:30,0:19:44.22:0,44,444	0/0:33,0:33:87.27:0,87,1114	0/0:16,0:16:45.13:0,45,567	0/0:30,0:29:87.26:0,87,1087	0/0:20,0:20:57.18:0,57,739	1/1:1,13:13:35.83:402,36,0	1/1:5,15:13:22.75:227,23,0	0/0:18,0:18:54.16:0,54,676	0/0:14,0:14:42.13:0,42,532	0/0:18,0:18:54.15:0,54,674	1/1:1,20:20:35.78:399,36,0	1/1:1,17:16:33.56:372,34,0	0/0:23,0:22:63.18:0,63,799	1/1:2,5:7:9.02:101,9,0	0/0:12,0:5:11.68:0,12,115	0/0:16,0:10:21.02:0,21,217	0/0:4,0:4:11.98:0,12,106	0/0:30,0:29:87.25:0,87,1089	0/0:22,0:22:57.18:0,57,738	0/0:13,0:13:39.13:0,39,505	1/1:2,26:21:60.02:641,60,0	0/0:11,0:8:17.67:0,18,156	0/0:23,0:17:20.99:0,21,192	0/0:6,0:5:3:0,3,25
chr10	44707474	.	T	TAAAA	2085.11	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=0.051;DP=503;FS=3.079;HRun=8;HaplotypeScore=100.2120;InbreedingCoeff=0.8622;MQ=50.93;MQ0=36;MQRankSum=-5.455;QD=17.09;ReadPosRankSum=-4.439;VQSLOD=-0.3958;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,8:8:9.03:187,9,0	0/0:3,0:3:9.03:0,9,136	0/0:18,0:8:17.89:0,18,206	0/0:9,0:3:9.03:0,9,133	1/1:9,23:21:36:651,36,0	0/0:33,0:33:90.18:0,90,1250	0/0:15,0:15:39.09:0,39,569	0/0:30,0:29:44.53:0,45,996	0/0:21,0:21:57.13:0,57,798	0/0:16,0:14:16.24:0,16,41	0/0:21,0:14:7.49:0,7,19	0/0:19,0:19:57.18:0,57,837	0/0:15,0:15:39.11:0,39,590	0/0:19,0:19:57.18:0,57,839	0/0:20,0:19:15.41:0,15,39	0/0:18,0:16:5.98:0,6,23	0/0:22,0:22:57.17:0,57,856	0/0:9,0:8:5.29:0,5,14	1/1:5,7:5:9.03:213,9,0	1/1:6,11:10:12:240,12,0	1/1:1,2:3:6.02:147,6,0	0/0:29,0:29:84:0,84,1216	0/0:19,0:19:51.13:0,51,751	0/0:14,0:14:33.04:0,33,474	0/0:27,0:21:28.41:0,28,85	1/1:2,8:9:18.06:354,18,0	1/1:4,23:21:15.52:368,16,0	1/1:1,7:7:6.02:115,6,0
chr10	44707526	.	G	GT	246.43	PASS	AC=2;AF=0.038;AN=52;BaseQRankSum=3.507;DP=523;FS=1.229;HRun=6;HaplotypeScore=88.5329;InbreedingCoeff=0.7030;MQ=52.82;MQ0=28;MQRankSum=-1.748;QD=17.60;ReadPosRankSum=1.407;VQSLOD=3.3798;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:6:3.01:0,3,31	./.	0/0:22,0:19:56.71:0,57,553	0/0:13,0:11:10.33:0,10,255	0/0:18,0:11:27.06:0,27,275	0/0:28,0:28:75.17:0,75,765	0/0:14,0:14:39.09:0,39,398	0/0:31,0:31:87.18:0,87,880	0/0:22,0:22:60.11:0,60,599	0/0:28,0:24:69.16:0,69,704	0/0:22,0:14:30.06:0,30,306	0/0:24,0:23:69.14:0,69,697	0/0:15,0:15:42.08:0,42,422	0/0:20,0:20:54.10:0,54,544	0/0:21,0:21:42.09:0,42,428	0/0:17,0:16:42.08:0,42,422	1/1:3,11:12:27.09:340,27,0	0/0:9,0:8:18.04:0,18,183	0/0:21,0:12:23.98:0,24,245	0/0:13,0:11:24.05:0,24,244	./.	0/0:27,0:27:75.17:0,75,765	0/0:19,0:18:51.12:0,51,520	0/0:12,0:11:33.06:0,33,329	0/0:31,0:25:60.12:0,60,605	0/0:18,0:13:33.08:0,33,336	0/0:39,0:31:57.09:0,57,570	0/0:7,0:6:3:0,3,31
chr10	44707611	.	G	GCC	389.79	PASS	AB=0.840;AC=3;AF=0.058;AN=52;BaseQRankSum=3.439;DP=571;FS=1.279;HRun=6;HaplotypeScore=86.5291;InbreedingCoeff=0.4755;MQ=41.99;MQ0=79;MQRankSum=-1.975;QD=12.57;ReadPosRankSum=1.739;VQSLOD=-0.1295;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:23:9.47:0,9,29	1/1:4,6:8:18.06:304,18,0	./.	./.	0/0:15,0:12:4.26:0,4,14	0/0:28,0:28:75.23:0,75,914	0/0:17,0:17:39.11:0,39,476	0/0:30,0:29:69.20:0,69,841	0/0:23,0:23:60.18:0,60,732	0/0:21,0:15:39.11:0,39,467	0/0:19,0:17:30.09:0,30,366	0/0:21,0:20:51.15:0,51,622	0/0:17,0:17:45.14:0,45,549	0/0:16,0:16:42.13:0,42,512	0/0:21,0:19:30.08:0,30,354	0/0:20,0:19:30.08:0,30,366	0/1:17,4:14:21.46:188,0,21	0/0:8,0:7:15.05:0,15,183	0/0:18,0:9:13.16:0,13,42	0/0:15,0:13:12.13:0,12,38	0/0:25,0:17:2.84:0,3,9	0/0:29,0:29:60.19:0,60,731	0/0:25,0:24:63.20:0,63,768	0/0:15,0:14:36.11:0,36,439	0/0:26,0:26:51.16:0,51,622	0/0:16,0:14:29.15:0,29,154	0/0:26,0:20:27.53:0,28,81	0/0:15,0:11:3.99:0,4,12
chr10	44707612	.	C	CT	2920.68	PASS	AB=0.552;AC=15;AF=0.288;AN=52;BaseQRankSum=6.843;DP=571;FS=12.302;HRun=0;HaplotypeScore=69.4808;InbreedingCoeff=0.8652;MQ=42.00;MQ0=78;MQRankSum=-6.051;QD=18.37;ReadPosRankSum=3.032;VQSLOD=4.9822;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,25:23:27.02:383,27,0	0/0:10,0:8:17.23:0,17,73	./.	./.	1/1:0,15:12:21.07:319,21,0	0/0:29,0:29:78.25:0,78,1073	0/0:17,0:17:45.06:0,45,583	0/0:30,0:29:84.13:0,84,1067	0/0:23,0:23:63.17:0,63,858	0/0:22,0:16:39.13:0,39,542	0/0:19,0:17:33.04:0,33,435	0/0:21,0:20:57.17:0,57,763	0/0:17,0:17:48.15:0,48,653	0/0:16,0:16:45.14:0,45,612	0/0:21,0:19:36.10:0,36,471	0/0:20,0:19:33.10:0,33,445	0/0:21,0:14:12.59:0,13,74	0/0:8,0:7:15.05:0,15,209	1/1:0,17:9:27.02:345,27,0	1/1:0,15:13:33.11:501,33,0	1/1:15,10:17:6.02:91,6,0	0/0:29,0:29:66.20:0,66,889	0/0:24,0:23:66.18:0,66,898	0/0:15,0:14:36.12:0,36,503	0/0:26,0:26:54.17:0,54,734	0/1:3,13:14:44.65:465,0,45	1/1:0,26:20:57.19:868,57,0	1/1:4,11:11:9.03:137,9,0
chr10	44707807	.	ATGT	A	437.35	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=4.275;DP=543;FS=4.188;HRun=0;HaplotypeScore=86.4416;InbreedingCoeff=0.8476;MQ=59.07;MQ0=28;MQRankSum=-3.041;QD=36.45;ReadPosRankSum=1.399;VQSLOD=4.5109;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:27.09:0,27,611	1/1:0,2:2:6.02:100,6,0	0/0:22,0:15:41.50:0,42,854	0/0:22,0:14:39.10:0,39,747	0/0:21,0:12:24.08:0,24,538	0/0:34,0:33:63.82:0,64,1966	0/0:17,0:17:48.16:0,48,1088	0/0:29,0:29:87.29:0,87,1919	0/0:20,0:20:57.20:0,57,1292	0/0:24,0:17:48.16:0,48,1060	0/0:20,0:14:33.07:0,33,698	0/0:28,0:28:84.29:0,84,1894	0/0:34,0:34:99:0,99,2151	0/0:22,0:22:63.22:0,63,1405	0/0:18,0:17:39.13:0,39,871	0/0:14,0:13:27.08:0,27,569	1/1:0,10:9:27.09:448,27,0	0/0:18,0:16:45.15:0,45,1017	0/0:11,0:8:21.07:0,21,457	0/0:17,0:12:36.08:0,36,767	0/0:14,0:13:21.07:0,21,476	0/0:22,0:22:63.22:0,63,1427	0/0:33,0:32:93.28:0,93,2060	0/0:19,0:19:51.18:0,51,1156	0/0:25,0:20:57.18:0,57,1222	0/0:15,0:11:33.11:0,33,746	0/0:14,0:8:15.05:0,15,340	0/0:2,0:2:3.01:0,3,68
chr10	44707947	.	TA	T	4676.50	PASS	AC=30;AF=0.556;AN=54;BaseQRankSum=11.732;DP=540;FS=5.973;HRun=3;HaplotypeScore=130.3099;InbreedingCoeff=0.9663;MQ=73.82;MQ0=1;MQRankSum=-10.140;QD=25.84;ReadPosRankSum=1.546;VQSLOD=4.0069;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,11:12:8.55:111,9,0	1/1:0,5:4:9.03:111,9,0	0/0:23,1:24:33.38:0,33,823	0/0:27,0:27:73.08:0,73,1015	1/1:0,11:10:21.07:260,21,0	0/0:45,0:45:99:0,132,1860	0/0:14,0:14:39.10:0,39,518	0/0:42,0:42:99:0,120,1664	0/0:24,0:24:72.24:0,72,1036	1/1:2,13:13:33.10:409,33,0	1/1:1,11:9:24.08:297,24,0	0/0:28,0:28:84.25:0,84,1169	0/0:38,0:38:99:0,111,1561	0/0:29,0:29:81.22:0,81,1136	1/1:0,16:16:36.11:446,36,0	1/1:1,15:15:39.03:447,39,0	1/1:0,20:20:54.17:668,54,0	1/1:1,10:11:27.08:332,27,0	1/1:2,5:7:15.05:184,15,0	1/1:0,6:6:18.06:223,18,0	1/1:0,24:24:54.17:669,54,0	0/0:35,0:35:93.31:0,93,1339	0/0:27,0:27:60.14:0,60,822	0/0:26,0:26:75.21:0,75,1057	1/1:2,8:9:15.05:185,15,0	1/1:3,6:9:18.06:223,18,0	1/1:0,6:6:9.03:111,9,0	./.
chr10	44708102	.	A	AC	2543.02	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=15.812;DP=545;FS=9.719;HRun=2;HaplotypeScore=110.9086;InbreedingCoeff=0.9580;MQ=84.29;MQ0=3;MQRankSum=-14.560;QD=11.67;ReadPosRankSum=3.311;VQSLOD=1.5176;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:17,1:16:21.85:96,22,0	1/1:11,0:8:19.44:96,19,0	0/0:34,0:33:87.10:0,87,1018	0/0:27,0:25:48.70:0,49,690	1/1:11,2:12:16.10:123,16,0	0/0:27,0:27:63.13:0,63,726	0/0:19,0:19:57.18:0,57,706	0/0:25,0:25:69.17:0,69,809	0/0:21,0:21:63.20:0,63,780	1/1:22,4:24:64.08:478,64,0	1/1:17,1:18:37.90:248,38,0	0/0:23,0:23:60.18:0,60,730	0/0:35,0:35:81.23:0,81,1003	0/0:27,0:27:66.17:0,66,781	1/1:15,0:15:36.03:174,36,0	1/1:16,0:16:35.47:167,35,0	1/1:17,1:18:42.81:258,43,0	1/1:8,2:10:22.33:174,22,0	1/1:7,2:8:17.20:114,17,0	1/1:3,0:2:5.27:22,5,0	1/1:17,4:20:39.31:272,39,0	0/0:24,0:22:60.15:0,60,721	0/0:33,0:32:45.55:0,46,954	0/0:32,0:32:90.27:0,90,1102	1/1:19,1:19:36.10:183,36,0	1/1:7,4:10:17.52:196,18,0	1/1:4,1:5:11.47:84,11,0	1/1:2,2:2:6.02:86,6,0
chr10	44708103	.	CCTA	C	7133.62	PASS	AB=0.582;AC=27;AF=0.482;AN=56;BaseQRankSum=11.991;DP=536;FS=2.677;HRun=0;HaplotypeScore=112.4060;InbreedingCoeff=0.6169;MQ=84.15;MQ0=3;MQRankSum=-11.686;QD=34.13;ReadPosRankSum=3.248;VQSLOD=5.7240;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,14:14:24.08:423,24,0	1/1:1,10:8:21.07:370,21,0	0/0:33,0:32:86.88:0,87,1947	0/0:27,0:25:61.46:0,61,1457	0/1:4,9:12:53.80:193,0,54	0/0:27,0:27:63.22:0,63,1489	0/0:19,0:19:57.20:0,57,1348	0/0:25,0:25:72.24:0,72,1625	0/0:21,0:21:63.22:0,63,1456	0/1:7,18:24:40.22:938,0,40	1/1:1,15:16:38.62:643,39,0	0/0:24,0:24:60.21:0,60,1406	0/0:35,0:35:80.51:0,81,1915	0/0:26,0:26:66.21:0,66,1469	1/1:1,14:15:39.13:687,39,0	1/1:0,16:16:39.13:687,39,0	1/1:2,16:18:45.11:761,45,0	0/1:2,8:10:11.13:316,0,11	1/1:4,5:8:18.06:306,18,0	1/1:0,3:2:6.02:106,6,0	1/1:5,14:18:42.12:696,42,0	0/0:25,0:23:66.23:0,66,1549	0/0:33,0:32:90.31:0,90,2049	0/0:32,0:32:90.31:0,90,2015	1/1:2,17:18:39.13:687,39,0	0/1:4,6:9:89.87:93,0,90	0/1:1,4:5:23.48:147,0,23	1/1:4,0:2:6.02:82,6,0
chr10	44708147	.	AC	A	5232.03	PASS	AB=0.524;AC=11;AF=0.212;AN=52;BaseQRankSum=-2.300;DP=516;FS=6.758;HRun=1;HaplotypeScore=93.7435;InbreedingCoeff=0.8054;MQ=57.42;MQ0=45;MQRankSum=8.210;QD=29.90;ReadPosRankSum=3.278;VQSLOD=4.3481;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:13:30.10:0,30,477	0/0:6,0:3:9.03:0,9,143	0/0:31,0:15:45.15:0,45,717	0/0:19,0:7:21.07:0,21,331	0/0:8,0:5:3.01:0,3,48	0/0:28,0:28:69.24:0,69,1103	0/0:14,0:13:39.13:0,39,620	0/0:32,0:27:78.27:0,78,1247	0/0:22,0:22:66.23:0,66,1054	0/0:31,0:21:51.17:0,51,804	0/0:17,0:10:21.07:0,21,334	1/1:4,22:24:9.44:707,9,0	1/1:5,37:38:33.46:1044,33,0	1/1:2,24:26:51.17:713,51,0	0/0:20,0:19:54.18:0,54,846	0/0:21,0:19:54.16:0,54,812	0/0:17,0:14:33.10:0,33,492	0/0:9,0:8:21.07:0,21,335	0/0:9,0:5:15.05:0,15,240	./.	0/0:4,0:2:6.02:0,6,96	1/1:1,25:25:69.23:964,69,0	1/1:0,22:22:57.19:797,57,0	0/1:3,30:33:11.65:1007,0,12	0/0:13,0:12:27.09:0,27,431	0/0:13,0:11:21.07:0,21,335	0/0:6,0:6:18.06:0,18,287	./.
chr10	44709925	.	C	CG	120.34	PASS	AC=4;AF=0.154;AN=26;BaseQRankSum=3.133;DP=461;FS=0.000;HRun=0;HaplotypeScore=35.9795;InbreedingCoeff=0.6087;MQ=19.04;MQ0=267;MQRankSum=-0.704;QD=2.80;ReadPosRankSum=0.518;VQSLOD=1.7100;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/0:7,0:3:6.02:0,6,84	./.	./.	1/1:4,14:10:22.56:81,23,0	0/0:25,0:15:3.01:0,3,42	0/0:15,0:4:6.02:0,6,84	./.	./.	0/0:18,0:10:26.87:0,27,209	0/0:12,0:11:26.98:0,27,227	./.	0/0:24,0:11:3.01:0,3,42	./.	./.	0/0:9,0:1:3:0,3,25	./.	./.	./.	1/1:8,17:12:32.72:142,33,0	./.	0/0:25,0:20:30.10:0,30,419	0/0:23,0:15:21.07:0,21,294	./.	0/0:11,0:4:12:0,12,108	0/0:5,2:1:2.22:0,2,7	./.	./.
chr10	44709937	.	AT	A	1017.67	PASS	AC=14;AF=0.700;AN=20;BaseQRankSum=5.957;DP=422;FS=12.500;HRun=7;HaplotypeScore=32.9834;InbreedingCoeff=0.8371;MQ=19.94;MQ0=217;MQRankSum=-0.716;QD=12.26;ReadPosRankSum=-0.185;VQSLOD=0.7801;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	1/1:0,6:2:6.01:61,6,0	./.	./.	1/1:3,15:12:21.04:214,21,0	./.	./.	0/0:31,0:8:24.06:0,24,288	./.	1/1:5,8:7:9.02:92,9,0	1/1:1,10:10:27.06:275,27,0	./.	./.	./.	./.	./.	./.	./.	./.	1/1:6,16:12:33.07:336,33,0	./.	0/0:22,0:17:24.08:0,24,300	0/0:21,0:14:24.08:0,24,302	./.	1/1:2,5:4:12.03:122,12,0	1/1:3,3:1:3.01:30,3,0	./.	./.
chr10	44710495	.	T	TTTTC	362.80	PASS	AC=8;AF=0.190;AN=42;BaseQRankSum=5.082;DP=362;FS=18.682;HRun=0;HaplotypeScore=62.1010;InbreedingCoeff=0.6540;MQ=48.03;MQ0=86;MQRankSum=-4.652;QD=16.49;ReadPosRankSum=1.182;VQSLOD=1.7055;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	1/1:2,3:3:6.02:119,6,0	0/0:29,0:16:48.15:0,48,922	0/0:28,0:18:48.16:0,48,1006	1/1:3,1:1:3.01:58,3,0	0/0:23,0:23:60.14:0,60,1210	0/0:24,0:21:63.16:0,63,1228	0/0:25,0:18:51.14:0,51,944	0/0:25,0:25:72.12:0,72,1368	0/0:5,1:3:3.01:0,3,63	./.	0/0:12,0:9:21.07:0,21,433	0/0:28,0:24:60.14:0,60,1158	0/0:29,0:25:69.17:0,69,1357	0/0:8,0:2:6.02:0,6,119	./.	./.	./.	0/0:9,0:2:6.02:0,6,126	1/1:4,4:5:12.04:247,12,0	./.	0/0:24,0:21:57.17:0,57,1148	0/0:27,2:28:19.74:0,20,1401	0/0:13,0:12:33.11:0,33,641	1/1:2,3:2:3.01:59,3,0	0/0:5,0:1:3.01:0,3,63	0/0:6,0:1:3.01:0,3,53	./.
chr10	44710496	.	A	AG	38.46	PASS	AB=1.000;AC=9;AF=0.214;AN=42;BaseQRankSum=6.058;DP=375;FS=26.236;HRun=0;HaplotypeScore=53.3956;InbreedingCoeff=0.6060;MQ=47.27;MQ0=92;MQRankSum=-5.621;QD=1.20;ReadPosRankSum=0.200;VQSLOD=0.2781;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	1/1:2,3:3:5.75:30,6,0	0/0:32,0:15:45.14:0,45,615	0/0:29,0:18:51.04:0,51,686	1/1:4,1:2:2.80:13,3,0	0/0:23,0:23:60.16:0,60,815	0/0:24,0:21:63.12:0,63,831	0/0:26,0:17:48.13:0,48,636	0/0:25,0:25:72.03:0,72,914	0/0:5,1:3:6:0,6,65	./.	0/0:12,0:9:21.07:0,21,293	0/0:27,0:23:60.02:0,60,764	0/0:29,0:25:69.13:0,69,917	0/0:8,0:2:6.02:0,6,83	./.	./.	./.	0/0:9,0:2:6.02:0,6,84	1/1:6,4:7:17.34:95,17,0	./.	0/0:25,0:22:57.16:0,57,773	0/0:29,2:29:61.08:0,61,945	0/0:14,0:13:32.97:0,33,413	1/1:3,3:3:2.88:15,3,0	0/1:6,0:2:10.46:10,0,36	0/0:6,0:1:3.01:0,3,42	./.
chr10	44710500	.	A	AC	279.67	PASS	AB=0.875;AC=9;AF=0.214;AN=42;BaseQRankSum=6.251;DP=398;FS=29.013;HRun=0;HaplotypeScore=49.7711;InbreedingCoeff=0.5717;MQ=41.83;MQ0=116;MQRankSum=-5.587;QD=6.50;ReadPosRankSum=-0.568;VQSLOD=0.9735;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	1/1:6,3:5:9.03:108,9,0	0/0:30,7:13:39.10:0,39,526	0/0:27,3:16:48.15:0,48,653	1/1:6,2:3:3.01:36,3,0	0/0:21,0:21:57.19:0,57,796	0/0:24,0:21:54.18:0,54,750	0/0:23,0:14:39.13:0,39,545	0/0:25,0:24:60.20:0,60,838	0/0:4,1:3:6.02:0,6,84	./.	0/0:15,0:12:24.08:0,24,331	0/0:27,0:23:51.17:0,51,711	0/0:29,0:25:63.21:0,63,879	0/0:11,0:4:6.02:0,6,84	./.	./.	./.	0/0:10,0:2:6.02:0,6,84	1/1:5,6:7:17.54:188,18,0	./.	0/0:23,1:21:54.18:0,54,754	0/0:30,4:29:1.16:0,1,812	0/0:14,0:13:30.10:0,30,410	1/1:4,4:3:3.01:37,3,0	0/1:6,1:2:35.86:41,0,36	0/0:7,0:1:3.01:0,3,42	./.
chr10	44710768	.	AT	A	1028.58	PASS	AB=0.635;AC=10;AF=0.192;AN=52;BaseQRankSum=4.944;DP=643;FS=0.000;HRun=2;HaplotypeScore=48.1178;InbreedingCoeff=0.6169;MQ=27.74;MQ0=190;MQRankSum=-1.748;QD=7.35;ReadPosRankSum=3.462;VQSLOD=0.9556;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:8:12.04:0,12,177	0/0:8,0:6:3.01:0,3,45	./.	./.	0/0:23,0:16:18.06:0,18,269	0/0:27,0:21:24.08:0,24,352	0/0:14,0:11:15.05:0,15,223	0/0:32,0:20:54.15:0,54,780	0/0:22,0:21:24.07:0,24,341	0/0:18,0:11:33.08:0,33,452	0/0:19,0:16:12.04:0,12,179	1/1:9,13:14:21.06:245,21,0	0/1:12,20:19:9.91:125,0,10	1/1:8,18:17:9.03:105,9,0	0/0:35,0:23:14.96:0,15,174	0/0:22,0:10:5.99:0,6,66	0/0:22,0:13:18.02:0,18,243	0/0:16,0:9:9.03:0,9,124	0/0:29,0:15:38.92:0,39,544	0/0:21,0:11:21.07:0,21,314	0/0:35,0:23:15.01:0,15,198	1/1:8,7:12:8.91:105,9,0	1/1:6,20:19:39.01:454,39,0	0/1:9,10:14:66.59:152,0,67	0/0:15,0:9:6.02:0,6,89	0/0:30,0:16:42.14:0,42,628	0/0:27,0:11:15.05:0,15,224	0/0:12,0:8:11.89:0,12,180
chr10	44710964	.	C	CT	2048.67	PASS	AB=1.000;AC=14;AF=0.250;AN=56;BaseQRankSum=4.044;DP=493;FS=10.328;HRun=7;HaplotypeScore=98.0355;InbreedingCoeff=0.7840;MQ=55.92;MQ0=8;MQRankSum=-7.133;QD=13.39;ReadPosRankSum=-0.700;VQSLOD=2.1519;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:15:32.76:0,33,318	0/0:15,0:15:31.21:0,31,360	0/0:10,0:9:14.99:0,15,136	0/0:6,0:6:10.56:0,11,74	0/0:32,0:30:81.13:0,81,781	0/0:21,0:20:48.06:0,48,457	0/0:11,0:11:24.03:0,24,232	0/1:30,0:30:72.34:72,0,520	0/0:25,0:25:37.37:0,37,527	1/1:7,19:19:41.81:490,42,0	1/1:6,18:21:49.81:559,50,0	0/1:15,0:14:3.66:4,0,304	0/0:13,0:12:21.03:0,21,203	0/0:11,0:11:8.07:0,8,233	1/1:7,5:6:12.01:131,12,0	1/1:6,7:10:18.06:217,18,0	0/0:18,0:18:17.05:0,17,325	1/1:2,9:9:24.07:289,24,0	0/0:18,0:16:27.03:0,27,256	0/0:27,0:23:54.08:0,54,519	0/0:7,0:6:15.01:0,15,138	0/0:22,0:22:54.08:0,54,521	0/0:16,0:16:39.06:0,39,376	0/0:5,0:5:12.01:0,12,116	1/1:3,18:15:40.48:474,40,0	0/0:27,0:24:16.70:0,17,478	0/0:29,0:23:34.39:0,34,498	0/0:8,0:6:9.01:0,9,87
chr10	44711098	.	AG	A	285.58	PASS	AB=0.615;AC=3;AF=0.054;AN=56;BaseQRankSum=4.901;DP=473;FS=6.885;HRun=1;HaplotypeScore=54.5538;InbreedingCoeff=0.5635;MQ=50.75;MQ0=53;MQRankSum=-0.753;QD=14.28;ReadPosRankSum=2.250;VQSLOD=2.8201;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:8:21.07:0,21,335	0/1:3,5:3:35.94:36,0,42	0/0:16,0:6:15.05:0,15,240	0/0:14,0:4:11.78:0,12,154	0/0:26,0:21:51.17:0,51,812	0/0:24,0:24:69.24:0,69,1102	0/0:10,0:10:30.09:0,30,456	0/0:34,0:26:75.24:0,75,1168	0/0:18,0:18:51.17:0,51,815	0/0:13,0:10:24.08:0,24,384	0/0:24,0:19:42.14:0,42,670	0/0:20,0:19:51.17:0,51,788	0/0:12,0:11:30.10:0,30,479	0/0:16,0:15:39.13:0,39,623	0/0:20,0:14:42.14:0,42,637	0/0:13,0:8:18.06:0,18,287	1/1:2,10:9:27.05:355,27,0	0/0:9,0:9:27.09:0,27,431	0/0:13,0:12:36.10:0,36,531	0/0:34,0:30:78.26:0,78,1223	0/0:9,0:9:27.09:0,27,432	0/0:17,0:16:36.12:0,36,575	0/0:37,0:36:99:0,99,1557	0/0:4,0:4:12.04:0,12,192	0/0:15,0:11:30.10:0,30,479	0/0:20,0:15:42.14:0,42,669	0/0:22,0:20:54.18:0,54,854	0/0:4,0:2:6.02:0,6,96
chr10	44711275	.	AGCCTT	A	2119.24	PASS	AB=0.760;AC=8;AF=0.143;AN=56;BaseQRankSum=5.464;DP=525;FS=8.071;HRun=0;HaplotypeScore=132.1624;InbreedingCoeff=-0.1783;MQ=50.36;MQ0=34;MQRankSum=-10.813;QD=15.47;ReadPosRankSum=-1.275;VQSLOD=2.4349;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:11:9.52:0,10,487	0/0:21,0:18:54.16:0,54,1592	0/0:29,0:13:39.13:0,39,1181	0/0:26,0:15:27.13:0,27,1198	0/1:18,0:15:12.86:13,0,625	0/0:18,0:18:50.74:0,51,1462	0/0:7,0:7:21.06:0,21,606	0/0:33,0:32:96.28:0,96,2783	0/0:18,0:18:54.15:0,54,1417	0/1:11,11:17:99:606,0,149	0/1:14,8:14:99:267,0,389	0/0:24,0:24:69.17:0,69,1940	0/0:23,0:23:69.15:0,69,1862	0/0:20,0:20:60.19:0,60,1771	0/1:12,7:16:99:429,0,537	0/1:5,5:9:72.47:335,0,72	0/0:24,0:24:63.21:0,63,1794	0/1:3,2:4:87.89:124,0,88	0/0:11,0:10:5.09:0,5,484	0/0:24,0:16:11.17:0,11,928	0/0:7,0:7:14.94:0,15,338	0/0:21,0:21:59.79:0,60,1633	0/0:20,0:20:60.18:0,60,1723	0/0:18,0:18:51.16:0,51,1574	0/1:7,12:9:99:425,0,166	0/1:21,1:16:54.83:55,0,639	0/0:22,0:19:11.17:0,11,892	0/0:10,0:9:27.09:0,27,593
chr10	44711311	.	TA	T	5677.31	PASS	AB=0.638;AC=24;AF=0.429;AN=56;BaseQRankSum=16.033;DP=552;FS=11.168;HRun=4;HaplotypeScore=112.6184;InbreedingCoeff=0.6933;MQ=54.88;MQ0=20;MQRankSum=-5.242;QD=21.67;ReadPosRankSum=0.225;VQSLOD=3.3329;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,11:11:24.07:286,24,0	0/0:13,0:12:30.09:0,30,402	0/0:24,0:23:69.19:0,69,901	0/0:16,0:16:42.14:0,42,585	1/1:0,20:16:45.03:519,45,0	0/0:25,0:25:72.18:0,72,968	0/0:14,0:14:39.10:0,39,512	0/0:43,0:43:99:0,123,1615	0/0:17,0:17:51.17:0,51,713	1/1:10,11:17:0.10:394,0,0	0/1:12,16:23:99:415,0,127	0/0:20,0:20:57.18:0,57,779	0/0:22,0:22:66.20:0,66,891	0/0:17,0:17:39.06:0,39,521	0/1:11,9:18:99:246,0,163	1/1:4,14:17:36.11:428,36,0	0/0:20,0:19:48.12:0,48,649	0/1:7,6:12:99:185,0,137	1/1:6,10:14:32.65:335,33,0	1/1:2,17:16:45.10:521,45,0	1/1:0,10:8:24.07:287,24,0	0/0:21,0:21:63.21:0,63,881	0/0:23,0:23:60.20:0,60,829	0/0:15,0:15:45.15:0,45,629	0/1:4,22:15:2.78:370,0,3	1/1:1,19:17:14.01:522,14,0	1/1:0,25:23:60.12:700,60,0	1/1:0,14:13:39.12:467,39,0
chr10	44711422	.	T	TG	5109.03	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=15.712;DP=500;FS=4.628;HRun=1;HaplotypeScore=80.7473;InbreedingCoeff=0.9607;MQ=66.58;MQ0=20;MQRankSum=-8.770;QD=24.68;ReadPosRankSum=-0.905;VQSLOD=4.4686;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,9:8:18.06:240,18,0	1/1:0,7:5:15.05:204,15,0	0/0:29,0:29:83.25:0,83,1008	0/0:17,0:15:30.12:0,30,461	1/1:0,23:20:48.16:648,48,0	0/0:21,0:21:60.18:0,60,759	0/0:18,0:18:51.17:0,51,662	0/0:35,0:35:99:0,99,1274	0/0:18,0:18:54.18:0,54,700	1/1:2,16:18:45.03:556,45,0	1/1:4,21:16:25.14:390,25,0	0/0:29,0:29:84.27:0,84,1091	0/0:27,0:27:81.26:0,81,1045	0/0:22,0:22:60.19:0,60,774	1/1:1,11:10:24.07:318,24,0	1/1:0,12:10:30.10:415,30,0	1/1:2,3:4:11.83:133,12,0	1/1:0,7:6:15.05:201,15,0	1/1:1,10:9:24.08:322,24,0	1/1:1,19:11:24.35:373,24,0	1/1:0,6:3:4.31:78,4,0	0/0:34,0:34:99:0,102,1296	0/0:34,0:34:99:0,102,1315	0/0:9,0:9:27.09:0,27,350	1/1:0,16:11:27.09:363,27,0	1/1:3,12:10:26.95:319,27,0	1/1:2,15:13:33.08:430,33,0	1/1:0,3:3:9.03:120,9,0
chr10	44711499	.	T	TA	548.99	PASS	AB=0.941;AC=5;AF=0.089;AN=56;BaseQRankSum=5.501;DP=566;FS=9.437;HRun=1;HaplotypeScore=101.8548;InbreedingCoeff=0.8227;MQ=65.75;MQ0=2;MQRankSum=-4.679;QD=17.16;ReadPosRankSum=1.502;VQSLOD=3.2034;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:15,1:16:2.39:2,0,514	1/1:0,10:8:24.08:382,24,0	0/0:22,0:21:63.13:0,63,832	0/0:18,0:16:48.15:0,48,644	0/0:26,0:26:63.21:0,63,861	0/0:26,0:25:78.26:0,78,1091	0/0:10,0:10:30.08:0,30,401	0/0:22,0:22:63.20:0,63,867	0/0:19,0:19:57.19:0,57,797	0/0:33,0:33:96.32:0,96,1339	0/0:32,1:32:92.52:0,93,1264	0/0:29,0:29:87.28:0,87,1200	0/0:21,0:21:63.21:0,63,879	0/0:31,0:31:90.30:0,90,1254	0/0:18,0:17:33.11:0,33,461	0/0:25,0:22:57.19:0,57,797	1/1:0,6:6:18.06:285,18,0	0/0:20,0:18:54.05:0,54,686	0/0:19,0:17:51.17:0,51,712	0/0:28,0:27:75.17:0,75,1005	0/0:14,0:14:42.11:0,42,552	0/0:29,0:29:81.23:0,81,1095	0/0:20,0:20:57.19:0,57,796	0/0:15,0:15:45.13:0,45,611	0/0:13,0:13:33.11:0,33,460	0/0:18,0:18:48.15:0,48,654	0/0:22,0:21:63.21:0,63,881	0/0:3,0:3:8.99:0,9,86
chr10	44711542	.	TG	T	287.26	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=1.308;DP=642;FS=6.964;HRun=1;HaplotypeScore=94.9738;InbreedingCoeff=0.9466;MQ=50.68;MQ0=18;MQRankSum=-4.086;QD=17.95;ReadPosRankSum=-2.168;VQSLOD=2.9548;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:19:33.10:0,33,503	1/1:3,3:3:9.02:109,9,0	0/0:30,0:5:15.04:0,15,219	0/0:22,0:6:18.06:0,18,285	0/0:32,0:29:69.24:0,69,1103	0/0:23,0:23:69.24:0,69,1098	0/0:19,0:19:57.19:0,57,904	0/0:39,0:38:99:0,117,1828	0/0:29,0:29:87.30:0,87,1385	0/0:29,0:26:78.27:0,78,1247	0/0:25,0:23:57.19:0,57,906	0/0:36,0:36:99:0,108,1724	0/0:25,0:25:75.26:0,75,1192	0/0:30,0:30:90.31:0,90,1438	0/0:22,0:21:45.15:0,45,717	0/0:20,0:18:48.16:0,48,767	1/1:1,9:10:21.07:292,21,0	0/0:19,0:16:39.13:0,39,623	0/0:30,0:22:63.19:0,63,979	0/0:21,0:19:36.12:0,36,575	0/0:18,0:18:45.12:0,45,683	0/0:20,0:20:57.19:0,57,899	0/0:20,0:20:60.20:0,60,959	0/0:15,0:15:45.15:0,45,717	0/0:21,0:16:45.15:0,45,718	0/0:20,0:18:54.17:0,54,839	0/0:32,0:29:87.28:0,87,1361	0/0:7,0:6:15.05:0,15,236
chr10	44712391	.	TC	T	628.01	PASS	AB=0.595;AC=3;AF=0.054;AN=56;BaseQRankSum=6.866;DP=622;FS=6.135;HRun=1;HaplotypeScore=80.4199;InbreedingCoeff=0.6244;MQ=55.19;MQ0=31;MQRankSum=1.436;QD=19.63;ReadPosRankSum=-0.353;VQSLOD=3.4606;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:22:57.19:0,57,910	1/1:2,5:6:18.05:235,18,0	0/0:24,0:10:30.10:0,30,474	0/0:20,0:12:36.12:0,36,546	0/0:23,0:23:69.22:0,69,1079	0/0:15,0:15:45.15:0,45,719	0/0:12,0:12:36.12:0,36,576	0/0:34,0:34:99:0,102,1629	0/0:31,0:30:90.31:0,90,1437	0/0:28,0:26:75.01:0,75,1174	0/0:31,0:29:78.27:0,78,1244	0/0:24,0:24:72.23:0,72,1125	0/0:44,0:43:99:0,129,2059	0/0:25,0:25:75.26:0,75,1193	0/0:19,0:11:33.10:0,33,504	0/0:19,0:13:39.13:0,39,621	0/1:8,17:22:95.57:497,0,96	0/0:7,0:7:21.07:0,21,335	0/0:20,0:16:45.15:0,45,717	0/0:21,0:21:60.20:0,60,958	0/0:17,0:14:42.14:0,42,671	0/0:15,0:15:42.14:0,42,670	0/0:19,0:19:54.18:0,54,855	0/0:26,0:26:75.24:0,75,1175	0/0:33,0:30:87.30:0,87,1390	0/0:24,0:22:66.22:0,66,1043	0/0:29,0:24:72.22:0,72,1125	0/0:4,0:4:12.04:0,12,192
chr10	44712978	.	A	ATGTCC	3092.04	PASS	AC=34;AF=0.739;AN=46;BaseQRankSum=8.997;DP=448;FS=50.688;HRun=0;HaplotypeScore=67.7972;InbreedingCoeff=0.6283;MQ=49.77;MQ0=22;MQRankSum=-8.990;QD=13.80;ReadPosRankSum=0.691;VQSLOD=0.6354;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:11:2.82:23,3,0	1/1:6,0:5:2.85:60,3,0	0/0:32,0:28:77.96:0,78,1447	0/0:28,0:27:78.24:0,78,1514	./.	0/0:31,0:31:87.06:0,87,1692	0/0:28,0:28:78.21:0,78,1664	0/0:28,0:28:69.20:0,69,1346	0/0:29,0:29:87.30:0,87,1877	1/1:19,4:16:38.68:765,39,0	1/1:8,4:8:1.85:23,2,0	1/1:25,0:15:17.65:352,18,0	1/1:21,0:13:17.80:375,18,0	1/1:20,0:16:21.07:433,21,0	1/1:7,0:7:3.01:60,3,0	1/1:5,0:3:6.02:121,6,0	1/1:11,0:7:3.01:61,3,0	./.	1/1:6,0:4:7.53:107,8,0	1/1:14,0:11:4.95:122,5,0	1/1:7,0:6:3.01:61,3,0	./.	1/1:16,0:10:1.87:61,2,0	1/1:10,0:5:3.01:62,3,0	./.	1/1:14,0:11:9.94:508,10,0	1/1:9,0:2:3.01:62,3,0	./.
chr10	44712979	.	T	TGCCCC	6020.09	PASS	AC=34;AF=0.739;AN=46;BaseQRankSum=-4.171;DP=461;FS=69.584;HRun=0;HaplotypeScore=64.1184;InbreedingCoeff=0.7332;MQ=48.85;MQ0=26;MQRankSum=-9.127;QD=25.62;ReadPosRankSum=-0.438;VQSLOD=1.9875;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,7:11:6:61,6,0	1/1:1,4:4:2.78:99,3,0	0/0:31,0:26:76.07:0,76,1418	0/0:28,0:26:78.19:0,78,1558	./.	0/0:31,0:31:87.25:0,87,1786	0/0:28,0:28:77.09:0,77,1531	0/0:25,0:25:69.20:0,69,1352	0/0:30,0:30:87.27:0,87,1869	1/1:5,16:16:42.11:1087,42,0	1/1:8,4:8:6.01:79,6,0	1/1:2,21:14:20.66:600,21,0	1/1:2,18:13:17.80:593,18,0	1/1:2,20:17:24.08:786,24,0	1/1:1,5:8:6.02:198,6,0	1/1:1,5:4:6.02:199,6,0	1/1:3,8:9:6.02:199,6,0	./.	1/1:4,4:8:15.02:340,15,0	1/1:0,12:11:11.99:254,12,0	1/1:1,2:5:3.01:99,3,0	./.	1/1:3,13:10:6.02:154,6,0	1/1:1,9:5:3.01:99,3,0	./.	1/1:1,14:12:36.02:1074,36,0	1/1:2,9:4:3.01:99,3,0	./.
chr10	44713215	.	G	GTA	4540.18	PASS	AB=0.654;AC=22;AF=0.579;AN=38;BaseQRankSum=7.696;DP=516;FS=46.690;HRun=0;HaplotypeScore=104.0795;InbreedingCoeff=0.1253;MQ=21.67;MQ0=171;MQRankSum=-1.613;QD=17.00;ReadPosRankSum=3.111;VQSLOD=2.9407;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	0/1:13,7:15:99:107,0,401	./.	./.	0/1:5,15:18:64.60:463,0,65	0/0:34,0:22:30.10:0,30,489	0/0:29,0:19:42.14:0,42,662	0/0:31,0:21:54.18:0,54,857	0/0:28,0:17:17.80:0,18,292	0/1:9,7:12:99:147,0,186	0/1:8,11:17:18.77:472,0,19	0/1:7,11:11:79.49:249,0,79	0/1:9,10:10:16.64:217,0,17	1/1:4,18:10:27.09:355,27,0	./.	./.	1/1:7,3:4:9.03:120,9,0	./.	./.	0/1:12,19:22:0.72:781,0,1	./.	1/1:2,7:8:18.06:233,18,0	1/1:4,10:9:27.09:367,27,0	1/1:7,4:3:6.02:78,6,0	0/1:22,17:36:99:606,0,543	1/1:8,2:3:6.02:115,6,0	./.	1/1:4,5:5:12.04:230,12,0
chr10	44713217	.	G	GGT	2843.27	PASS	AB=0.901;AC=24;AF=0.632;AN=38;BaseQRankSum=8.994;DP=523;FS=47.678;HRun=0;HaplotypeScore=115.9486;InbreedingCoeff=0.2362;MQ=21.75;MQ0=171;MQRankSum=-1.102;QD=10.41;ReadPosRankSum=2.000;VQSLOD=1.6259;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	0/1:13,7:15:91.12:91,0,274	./.	./.	0/1:20,0:18:55.61:205,0,56	0/0:35,0:23:30.06:0,30,414	0/0:29,0:18:33.11:0,33,481	0/0:31,0:21:57.10:0,57,724	0/0:29,0:18:17.80:0,18,263	0/1:17,0:13:95.59:96,0,148	0/1:20,0:18:13.67:262,0,14	0/1:10,10:13:15.62:240,0,16	1/1:9,10:10:16.94:213,17,0	1/1:5,18:11:27.08:320,27,0	./.	./.	1/1:7,3:4:9.03:109,9,0	./.	./.	1/1:31,0:22:2.59:389,3,0	./.	1/1:3,6:8:18.05:209,18,0	1/1:3,10:9:27.08:312,27,0	1/1:7,4:3:6.02:70,6,0	0/1:41,0:38:99:277,0,409	1/1:10,0:3:6.02:67,6,0	./.	1/1:9,0:5:12.03:133,12,0
chr10	44713234	.	TTTCCC	T	67.51	PASS	AB=0.739;AC=3;AF=0.071;AN=42;BaseQRankSum=3.813;DP=544;FS=1.657;HRun=0;HaplotypeScore=122.9862;InbreedingCoeff=0.3792;MQ=21.90;MQ0=191;MQRankSum=-0.532;QD=2.18;ReadPosRankSum=0.805;VQSLOD=2.4557;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	0/1:11,6:12:31.98:32,0,835	./.	./.	0/0:20,0:17:30.10:0,30,996	0/0:33,0:21:24.08:0,24,769	0/0:29,0:16:36.12:0,36,1073	0/0:39,0:23:66.19:0,66,2019	0/0:33,0:22:33.11:0,33,1039	0/0:23,0:18:42.11:0,42,1302	0/0:20,0:18:36.08:0,36,1116	0/0:23,0:14:38.83:0,39,1271	0/0:23,0:11:24.08:0,24,738	0/0:26,0:12:33.11:0,33,1095	./.	./.	1/1:11,3:3:9.03:129,9,0	0/0:7,0:1:3.01:0,3,58	0/0:9,0:1:3.01:0,3,100	0/0:28,0:20:54.18:0,54,1729	./.	0/0:9,0:8:18.02:0,18,429	0/0:13,0:7:21.03:0,21,617	0/0:14,0:2:5.05:0,5,60	0/0:39,0:35:90.27:0,90,2893	0/0:13,0:4:9.03:0,9,277	./.	0/0:5,0:4:9.03:0,9,299
chr10	44713241	.	ATTGTC	A	146.61	PASS	AB=0.727;AC=3;AF=0.071;AN=42;BaseQRankSum=3.809;DP=564;FS=0.000;HRun=0;HaplotypeScore=116.9777;InbreedingCoeff=0.3699;MQ=21.91;MQ0=209;MQRankSum=-0.149;QD=5.06;ReadPosRankSum=0.454;VQSLOD=2.1774;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/1:10,6:11:51.85:52,0,440	./.	./.	0/0:20,0:17:30.02:0,30,836	0/0:35,0:23:30.10:0,30,914	0/0:31,0:19:39:0,39,1048	0/0:36,0:19:51.18:0,51,1642	0/0:33,0:22:33.58:0,34,1014	0/0:25,0:19:42.14:0,42,1397	0/0:22,0:19:36.08:0,36,1022	0/0:24,0:14:35.92:0,36,1113	0/0:23,0:10:21.03:0,21,617	0/0:27,0:12:33.11:0,33,1095	./.	./.	1/1:10,3:3:9.03:189,9,0	0/0:7,0:1:3.01:0,3,100	0/0:13,0:2:6.02:0,6,200	0/0:29,0:19:51.09:0,51,1411	./.	0/0:8,0:6:8.94:0,9,139	0/0:17,0:8:17.97:0,18,376	0/0:15,0:1:3.01:0,3,56	0/0:39,0:34:87.30:0,87,2703	0/0:13,0:4:9.03:0,9,299	./.	0/0:5,0:4:9.03:0,9,299
chr10	44713544	.	CT	C	671.55	PASS	AB=0.741;AC=12;AF=0.222;AN=54;BaseQRankSum=5.640;DP=648;FS=30.703;HRun=9;HaplotypeScore=121.9856;InbreedingCoeff=0.6817;MQ=52.43;MQ0=62;MQRankSum=0.532;QD=5.60;ReadPosRankSum=4.410;VQSLOD=-0.2073;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,2:20:23.62:0,24,498	0/1:13,7:17:98.12:98,0,238	0/0:23,0:18:36.30:0,36,480	0/0:15,0:12:27.07:0,27,295	0/0:21,0:19:39.07:0,39,435	0/0:25,0:25:72.17:0,72,807	0/0:28,0:27:60.12:0,60,667	0/0:8,1:7:0:0,0,0	0/0:25,0:25:69.16:0,69,781	0/0:50,0:41:99:0,109,1225	0/0:35,1:30:84.25:0,84,967	1/1:2,10:7:12:110,12,0	1/1:4,6:6:5.99:55,6,0	1/1:3,2:2:3:27,3,0	0/0:35,0:31:81.16:0,81,905	0/0:24,0:24:66.15:0,66,747	0/1:28,15:36:99:215,0,526	0/0:24,0:25:60.01:0,60,650	0/0:17,0:12:30.09:0,30,346	0/0:40,1:38:65.69:0,66,970	0/0:20,1:20:23.67:0,24,516	1/1:2,11:8:18.01:165,18,0	./.	1/1:5,12:13:18.01:165,18,0	0/0:52,0:49:99:0,126,1420	0/0:23,1:22:32.67:0,33,615	0/0:18,1:16:11.63:0,12,374	0/0:7,0:9:17.89:0,18,188
chr10	44714005	.	TG	T	672.32	PASS	AC=4;AF=0.083;AN=48;BaseQRankSum=4.861;DP=465;FS=5.982;HRun=4;HaplotypeScore=94.9305;InbreedingCoeff=0.8195;MQ=56.22;MQ0=60;MQRankSum=0.510;QD=22.41;ReadPosRankSum=1.455;VQSLOD=2.4601;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:38:99:0,108,1510	1/1:2,8:8:18.05:213,18,0	0/0:26,0:19:48.13:0,48,636	0/0:29,0:23:57.64:0,58,750	0/0:11,0:11:27.09:0,27,377	0/0:26,0:26:78.22:0,78,1070	0/0:22,0:22:66.19:0,66,903	0/0:34,0:34:96.26:0,96,1303	0/0:20,0:20:60.16:0,60,817	0/0:13,0:10:30.10:0,30,420	0/0:15,0:13:36.12:0,36,503	0/0:19,0:4:11.87:0,12,80	0/0:8,0:3:3.01:0,3,42	./.	0/0:31,0:29:75.25:0,75,1049	0/0:10,0:8:24.08:0,24,335	1/1:3,17:17:48.15:576,48,0	0/0:9,0:9:27.09:0,27,378	0/0:12,0:12:33.07:0,33,440	./.	0/0:26,0:24:69.20:0,69,929	./.	0/0:6,0:3:3.01:0,3,42	./.	0/0:11,0:10:27.09:0,27,378	0/0:16,0:16:42.03:0,42,583	0/0:16,0:16:42.14:0,42,576	0/0:8,0:8:17.80:0,18,252
chr10	44714331	.	TCTGAGCTATCTC	T	208.92	PASS	AC=2;AF=0.043;AN=46;BaseQRankSum=2.923;DP=332;FS=2.575;HRun=0;HaplotypeScore=66.4222;InbreedingCoeff=0.3617;MQ=55.48;MQ0=29;MQRankSum=-1.387;QD=41.78;ReadPosRankSum=1.345;VQSLOD=3.0796;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:2:3.01:0,3,190	1/1:1,4:5:9.03:291,9,0	0/0:30,0:4:8.86:0,9,160	0/0:27,0:6:6.02:0,6,197	0/0:9,0:9:6.02:0,6,380	0/0:29,0:29:30.10:0,30,1909	0/0:14,0:14:3.01:0,3,191	0/0:31,0:31:87.30:0,87,5120	0/0:16,0:16:21.54:0,22,1241	0/0:4,0:3:9.03:0,9,571	./.	0/0:20,0:20:24.08:0,24,1527	0/0:25,0:24:33.11:0,33,2095	0/0:18,0:18:27.09:0,27,1635	0/0:7,0:6:15.05:0,15,950	0/0:10,0:7:21.07:0,21,1330	./.	0/0:2,0:1:3.01:0,3,190	0/0:10,0:9:27.09:0,27,1465	0/0:7,0:4:6.02:0,6,380	./.	0/0:15,0:15:30.10:0,30,1909	0/0:13,0:13:36.12:0,36,2143	./.	./.	0/0:4,0:2:6.02:0,6,354	0/0:6,0:4:12.04:0,12,760	0/0:2,0:2:6.02:0,6,380
chr10	44714620	.	A	AT	7294.82	PASS	AC=42;AF=0.778;AN=54;BaseQRankSum=11.729;DP=342;FS=32.148;HRun=1;HaplotypeScore=64.7262;InbreedingCoeff=0.9191;MQ=60.07;MQ0=10;MQRankSum=-4.757;QD=31.17;ReadPosRankSum=3.640;VQSLOD=2.9334;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,9:8:21.07:305,21,0	1/1:0,5:5:8.96:107,9,0	0/0:19,0:18:41.73:0,42,511	0/0:9,0:6:11.58:0,12,148	1/1:1,13:13:33.11:484,33,0	0/0:22,0:22:66.21:0,66,852	0/0:12,0:12:36.12:0,36,464	0/0:28,0:28:84.21:0,84,1021	0/0:17,0:17:39.13:0,39,506	1/1:1,7:4:12.04:180,12,0	1/1:1,8:6:18.06:250,18,0	1/1:0,7:6:18.06:260,18,0	1/1:1,14:13:33.11:494,33,0	1/1:0,17:17:42.14:612,42,0	1/1:1,11:9:21.07:275,21,0	1/1:1,7:8:18.06:262,18,0	./.	1/1:0,3:1:3.01:45,3,0	1/1:0,6:6:18.02:245,18,0	1/1:0,20:13:36.12:538,36,0	1/1:0,10:10:27.09:404,27,0	1/1:1,15:12:30.10:442,30,0	1/1:2,15:15:42.14:629,42,0	1/1:0,17:17:39.10:552,39,0	1/1:1,5:4:9.03:135,9,0	1/1:1,9:7:24.08:359,24,0	1/1:0,18:14:30.10:447,30,0	1/1:0,7:6:18.06:269,18,0
chr10	44714773	.	TTTCCCA	T	206.49	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=1.235;DP=400;FS=8.836;HRun=0;HaplotypeScore=106.1654;InbreedingCoeff=0.7711;MQ=48.22;MQ0=15;MQRankSum=-2.873;QD=18.77;ReadPosRankSum=0.586;VQSLOD=2.7293;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:11:27.09:0,27,1008	1/1:0,2:2:6.02:153,6,0	0/0:29,0:10:27.09:0,27,993	0/0:25,0:12:36.12:0,36,1301	0/0:17,0:17:30.09:0,30,979	0/0:19,0:19:57.20:0,57,2144	0/0:15,0:15:45.15:0,45,1654	0/0:23,0:23:63.18:0,63,1988	0/0:16,0:16:48.15:0,48,1683	0/0:14,0:13:36.12:0,36,1282	0/0:7,0:4:12.04:0,12,431	0/0:13,0:12:36.12:0,36,1307	0/0:16,0:15:45.15:0,45,1606	0/0:16,0:16:48.16:0,48,1805	0/0:15,0:6:12.04:0,12,446	0/0:4,0:3:6.02:0,6,224	1/1:5,4:6:6.02:153,6,0	0/0:12,0:8:12.04:0,12,451	0/0:15,0:11:33.11:0,33,1234	0/0:9,0:6:12.04:0,12,445	0/0:20,0:16:45.15:0,45,1684	0/0:7,0:7:21.07:0,21,789	0/0:13,0:13:39.10:0,39,1196	0/0:12,0:12:36.08:0,36,1130	0/0:11,0:10:24.08:0,24,899	0/0:19,0:14:39.13:0,39,1428	0/0:20,0:11:30.10:0,30,1122	0/0:7,0:7:21.07:0,21,790
chr10	44714788	.	AT	A	4361.37	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=6.584;DP=376;FS=2.628;HRun=2;HaplotypeScore=68.3286;InbreedingCoeff=0.9455;MQ=54.83;MQ0=8;MQRankSum=-6.444;QD=24.64;ReadPosRankSum=2.190;VQSLOD=4.7630;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,13:10:27.09:349,27,0	0/0:2,0:2:5.99:0,6,65	0/0:23,0:13:35.31:0,35,463	0/0:24,0:18:51.10:0,51,702	1/1:0,13:12:24.08:304,24,0	0/0:16,0:16:48.16:0,48,719	0/0:19,0:19:57.18:0,57,834	0/0:24,0:24:66.21:0,66,950	0/0:15,0:15:45.15:0,45,671	1/1:0,16:13:36.12:466,36,0	1/1:0,7:5:15.05:194,15,0	0/0:13,0:13:39.13:0,39,583	0/0:16,0:15:42.13:0,42,610	0/0:18,0:18:51.17:0,51,762	1/1:1,15:7:12.04:155,12,0	1/1:0,5:4:9.03:117,9,0	0/0:5,0:3:6.02:0,6,84	1/1:0,13:9:15.05:195,15,0	1/1:1,15:12:36.08:426,36,0	1/1:0,6:5:12.04:155,12,0	1/1:0,19:15:42.14:539,42,0	0/0:5,0:5:15.04:0,15,198	0/0:7,0:7:18.06:0,18,269	0/0:11,0:11:33.11:0,33,493	1/1:0,10:10:27.09:350,27,0	1/1:0,17:15:42.12:529,42,0	1/1:1,19:11:27.09:349,27,0	1/1:0,6:6:18.06:233,18,0
chr10	44714938	.	T	TCC	1505.13	PASS	AC=24;AF=0.462;AN=52;BaseQRankSum=8.379;DP=288;FS=0.693;HRun=0;HaplotypeScore=40.1933;InbreedingCoeff=0.8281;MQ=57.89;MQ0=23;MQRankSum=-5.871;QD=21.20;ReadPosRankSum=2.643;VQSLOD=3.6387;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,5:6:8.91:84,9,0	0/0:8,0:7:15.05:0,15,244	0/0:15,0:11:24.08:0,24,392	0/0:19,0:7:18.04:0,18,268	1/1:0,3:1:3.01:59,3,0	0/0:19,0:19:54.16:0,54,855	0/0:15,0:15:42.14:0,42,682	0/0:30,0:30:87.30:0,87,1418	0/0:11,0:11:27.09:0,27,441	./.	1/1:0,4:2:3.01:58,3,0	0/0:15,0:15:45.14:0,45,709	0/0:13,0:13:39.13:0,39,636	0/0:14,1:14:42.14:0,42,685	1/1:0,10:4:5.91:115,6,0	1/1:0,6:4:12.04:231,12,0	0/0:17,1:17:33.11:0,33,538	./.	1/1:2,4:5:11.96:156,12,0	1/1:0,8:6:15.05:287,15,0	1/1:0,2:2:3.01:57,3,0	0/0:8,0:7:21.07:0,21,342	0/0:12,0:11:33.10:0,33,511	0/0:15,0:14:42.14:0,42,685	1/1:2,0:2:3:26,3,0	1/1:2,7:8:21.02:334,21,0	1/1:0,8:4:9.03:175,9,0	1/1:0,3:2:6.02:117,6,0
chr10	44715078	.	TTAA	T	1104.26	PASS	AB=0.838;AC=24;AF=0.522;AN=46;BaseQRankSum=3.811;DP=278;FS=4.725;HRun=0;HaplotypeScore=81.1917;InbreedingCoeff=0.1740;MQ=49.38;MQ0=17;MQRankSum=-4.074;QD=6.10;ReadPosRankSum=-0.516;VQSLOD=1.2659;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,0:6:2.98:21,3,0	./.	./.	0/0:6,0:5:3.01:0,3,39	1/1:17,0:15:2.98:21,3,0	0/0:14,0:14:30.09:0,30,555	0/0:3,0:3:6.02:0,6,118	0/0:27,0:24:27.09:0,27,453	0/0:4,0:4:6.02:0,6,118	0/0:7,0:6:7.57:0,8,36	0/1:9,0:7:8.31:8,0,25	0/1:7,0:8:17.85:18,0,65	0/1:5,0:10:22:75,0,22	1/1:4,0:4:2.98:21,3,0	0/0:12,0:9:2.22:0,2,211	0/1:12,0:7:7.51:8,0,165	0/1:27,5:29:99:265,0,142	0/1:6,8:13:15.26:255,0,15	1/1:6,0:3:2.98:21,3,0	1/1:15,0:13:5.95:42,6,0	./.	./.	./.	0/0:1,0:2:0:0,0,0	1/1:9,6:13:2.27:203,2,0	1/1:16,0:15:26.78:188,27,0	1/1:5,0:5:8.93:63,9,0	1/1:3,0:3:5.95:42,6,0
chr10	44715100	.	TAATAATA	T	1797.68	PASS	AB=1.000;AC=18;AF=0.321;AN=56;BaseQRankSum=5.212;DP=285;FS=2.348;HRun=0;HaplotypeScore=85.6997;InbreedingCoeff=0.6551;MQ=44.36;MQ0=36;MQRankSum=-7.028;QD=23.97;ReadPosRankSum=4.027;VQSLOD=3.2284;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,5:3:3.01:81,3,0	0/0:7,0:5:15.04:0,15,194	0/0:7,0:3:9.01:0,9,106	0/0:4,0:3:9.03:0,9,202	1/1:1,8:7:9.03:152,9,0	0/0:12,0:12:36.12:0,36,1296	0/0:5,0:5:15.05:0,15,450	0/0:34,0:31:93.31:0,93,2320	0/0:9,0:9:27.09:0,27,618	0/0:8,0:6:17.14:0,17,139	0/0:10,0:5:9.81:0,10,64	0/0:6,0:6:1.17:0,1,271	0/1:10,0:8:45.18:45,0,179	0/1:7,0:4:8.44:8,0,73	0/0:11,0:9:26.02:0,26,617	0/0:11,0:5:12.93:0,13,414	0/0:43,0:38:99:0,107,1815	0/0:17,0:16:45.03:0,45,571	1/1:2,5:5:15.05:236,15,0	1/1:2,9:7:12.04:227,12,0	1/1:2,0:2:6.01:66,6,0	0/0:3,0:3:8.99:0,9,101	0/0:6,0:6:12.04:0,12,167	0/0:1,0:1:0:0,0,0	0/0:16,0:10:24.84:0,25,297	1/1:3,11:10:30.10:763,30,0	1/1:3,3:3:9.03:241,9,0	1/1:0,2:2:6.02:162,6,0
chr10	44715106	.	TA	T	1272.11	PASS	AB=0.792;AC=26;AF=0.464;AN=56;BaseQRankSum=8.367;DP=293;FS=0.000;HRun=2;HaplotypeScore=60.8248;InbreedingCoeff=0.5122;MQ=42.05;MQ0=41;MQRankSum=-3.714;QD=7.44;ReadPosRankSum=5.934;VQSLOD=0.7932;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,3:3:2.94:18,3,0	0/0:9,2:9:24.08:0,24,318	0/0:6,0:3:9.03:0,9,122	0/0:5,0:5:15.03:0,15,184	1/1:9,1:7:5.95:56,6,0	0/0:13,0:13:39.13:0,39,571	0/0:5,0:5:15.05:0,15,217	0/0:34,0:31:90.25:0,90,1201	0/0:11,0:11:33.11:0,33,457	1/1:1,6:3:9.03:117,9,0	1/1:1,7:4:12.04:150,12,0	0/0:8,0:8:18.15:0,18,198	0/0:10,0:8:4.69:0,5,80	0/0:8,0:5:8.89:0,9,122	0/1:8,2:8:52.27:52,0,237	0/1:9,4:6:18.53:19,0,160	0/1:32,10:37:99:256,0,607	0/1:11,5:15:71.87:132,0,72	1/1:5,1:5:14.98:173,15,0	1/1:9,2:7:5.85:35,6,0	1/1:0,2:2:6.02:68,6,0	0/0:5,0:5:12.04:0,12,163	0/0:5,0:5:12.04:0,12,163	0/0:1,0:1:0:0,0,0	1/1:8,6:8:3.14:101,3,0	1/1:11,3:10:29.47:198,29,0	1/1:3,3:3:8.83:53,9,0	1/1:2,2:2:5.88:35,6,0
chr10	44715358	.	CA	C	792.12	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-0.931;DP=500;FS=4.996;HRun=2;HaplotypeScore=104.0776;InbreedingCoeff=0.9339;MQ=52.32;MQ0=28;MQRankSum=1.090;QD=24.75;ReadPosRankSum=-0.215;VQSLOD=3.1163;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:17:47.50:0,47,634	1/1:1,6:6:18.06:233,18,0	0/0:18,0:7:6.07:0,6,213	0/0:15,0:6:17.97:0,18,219	0/0:22,0:21:47.80:0,48,699	0/0:16,0:15:45.14:0,45,654	0/0:20,0:20:60.20:0,60,891	0/0:31,0:31:92.71:0,93,937	0/0:28,0:28:78.23:0,78,1142	0/0:13,0:10:30.10:0,30,433	0/0:24,0:22:63.18:0,63,868	0/0:22,0:22:60.20:0,60,877	0/0:25,0:25:66.06:0,66,926	0/0:14,0:14:42.14:0,42,602	0/0:13,0:10:30.10:0,30,437	0/0:21,0:18:42.14:0,42,591	1/1:5,20:25:34.79:679,35,0	0/0:15,0:13:39.08:0,39,540	0/0:20,0:7:21.04:0,21,280	0/0:16,0:15:45.15:0,45,654	0/0:13,0:13:20.42:0,20,385	0/0:11,0:11:30.08:0,30,401	0/0:20,0:20:54.18:0,54,776	0/0:15,0:15:42.14:0,42,599	0/0:22,0:20:57.18:0,57,807	0/0:13,0:13:33.02:0,33,430	0/0:15,0:14:39.09:0,39,521	0/0:8,0:7:21.07:0,21,303
chr10	44715361	.	G	GT	4875.07	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=1.109;DP=491;FS=7.936;HRun=9;HaplotypeScore=88.1400;InbreedingCoeff=0.9744;MQ=52.40;MQ0=29;MQRankSum=2.520;QD=14.47;ReadPosRankSum=1.539;VQSLOD=4.6756;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:16:25.55:155,26,0	0/0:6,0:6:17.97:0,18,146	0/0:14,0:7:14.97:0,15,124	0/0:15,0:6:11.18:0,11,82	1/1:23,0:21:40.01:208,40,0	0/0:16,0:15:38.99:0,39,338	0/0:20,0:20:50.98:0,51,443	0/0:9,0:31:38.56:0,39,114	0/0:27,0:27:68.97:0,69,599	1/1:2,0:10:25.57:128,26,0	1/1:3,0:22:56.93:289,57,0	1/1:3,18:20:54.15:597,54,0	1/1:4,22:26:28.46:539,28,0	1/1:2,13:15:36.10:398,36,0	1/1:1,1:8:25.73:147,26,0	1/1:5,0:17:11.04:144,11,0	0/0:23,0:23:56.73:0,57,452	1/1:1,1:14:34.29:190,34,0	1/1:18,0:6:12.25:58,12,0	1/1:16,0:15:31.25:155,31,0	1/1:13,0:12:22.76:114,23,0	1/1:0,7:7:21.06:232,21,0	1/1:0,20:20:51.14:563,51,0	1/1:2,16:18:33.09:365,33,0	1/1:6,0:19:36.96:185,37,0	1/1:12,0:13:28.52:150,29,0	1/1:14,0:14:34.20:173,34,0	1/1:10,0:9:17.08:85,17,0
chr10	44715370	.	T	TTTTA	6357.72	PASS	AB=0.933;AC=23;AF=0.411;AN=56;BaseQRankSum=3.162;DP=486;FS=12.277;HRun=0;HaplotypeScore=104.2360;InbreedingCoeff=0.5111;MQ=53.21;MQ0=31;MQRankSum=-1.400;QD=24.55;ReadPosRankSum=0.425;VQSLOD=3.6062;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:2,13:18:3:917,0,3	0/0:8,0:6:17.78:0,18,121	0/0:13,0:6:15.04:0,15,230	0/0:13,0:5:4.97:0,5,125	1/1:2,21:22:42.10:1014,42,0	0/0:14,0:13:39.13:0,39,706	0/0:18,0:18:51.17:0,51,923	0/0:27,0:27:67.32:0,67,678	0/0:24,0:24:69.24:0,69,1252	1/1:12,0:10:18.76:76,19,0	0/1:24,0:22:26.18:78,0,26	0/0:20,0:19:51.68:0,52,261	0/0:24,0:24:54.53:0,55,327	0/0:16,0:16:40.21:0,40,212	0/1:15,0:13:10.95:11,0,108	0/1:18,0:16:28.56:41,0,29	0/1:23,0:22:4.62:5,0,309	0/1:18,0:16:28.27:49,0,28	1/1:4,16:13:33.05:549,33,0	1/1:1,12:14:36.08:915,36,0	1/1:3,9:11:24.08:586,24,0	0/0:12,0:12:29.12:0,29,180	0/0:20,0:20:48.68:0,49,244	0/0:18,0:18:37.34:0,37,202	0/1:17,0:15:23.07:56,0,23	1/1:2,9:12:32.88:724,33,0	1/1:0,9:15:36.12:896,36,0	1/1:2,7:8:18.06:440,18,0
chr10	44715629	.	C	CA	7858.65	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=17.056;DP=469;FS=4.179;HRun=0;HaplotypeScore=105.8486;InbreedingCoeff=0.9776;MQ=74.62;MQ0=0;MQRankSum=-7.292;QD=35.08;ReadPosRankSum=5.809;VQSLOD=4.3012;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,7:7:9.03:128,9,0	1/1:0,12:12:36.11:472,36,0	0/0:16,0:16:48.12:0,48,593	0/0:16,0:17:44.22:0,44,587	1/1:1,23:23:51.17:718,51,0	0/0:30,0:30:90.29:0,90,1240	0/0:11,0:11:33.10:0,33,444	0/0:24,0:24:69.21:0,69,909	0/0:18,0:18:54.18:0,54,754	1/1:0,17:16:48.16:693,48,0	1/1:0,12:12:27:350,27,0	0/0:20,0:20:60.13:0,60,713	0/0:28,0:28:81.21:0,81,974	0/0:13,0:13:36.11:0,36,446	1/1:0,19:18:54.11:742,54,0	1/1:0,14:13:36.12:512,36,0	1/1:0,8:8:9.03:120,9,0	1/1:0,6:6:18.06:258,18,0	1/1:0,5:4:12.04:175,12,0	1/1:0,28:25:69.23:980,69,0	1/1:0,10:9:24.08:341,24,0	0/0:25,0:25:75.08:0,75,862	0/0:26,0:26:78.16:0,78,923	0/0:17,0:17:51.13:0,51,616	1/1:0,16:15:42.14:590,42,0	1/1:0,13:11:30.10:421,30,0	1/1:1,24:24:72.17:1013,72,0	1/1:0,8:8:24.08:344,24,0
chr10	44716474	.	T	TG	5792.54	PASS	AB=1.000;AC=36;AF=0.643;AN=56;BaseQRankSum=2.814;DP=586;FS=4.295;HRun=7;HaplotypeScore=129.9293;InbreedingCoeff=0.7756;MQ=76.26;MQ0=0;MQRankSum=-6.117;QD=15.70;ReadPosRankSum=1.479;VQSLOD=3.8843;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:13,25:38:85.22:915,85,0	1/1:12,0:11:26.56:176,27,0	0/0:22,0:22:46.60:0,47,456	0/0:25,0:24:32.59:0,33,334	1/1:6,15:18:30.62:324,31,0	0/0:28,0:27:69.05:0,69,655	0/0:23,0:23:63.10:0,63,607	1/1:3,31:34:64.25:1002,64,0	0/0:26,0:26:72.05:0,72,675	1/1:6,0:8:11.47:60,11,0	1/1:4,0:7:8.59:44,9,0	0/0:23,0:23:15.88:0,16,98	0/0:19,0:19:11.06:0,11,77	0/0:25,0:25:0.44:0,0,79	1/1:5,0:17:40.42:218,40,0	1/1:3,0:12:28.96:157,29,0	1/1:36,0:36:75.86:474,76,0	1/1:1,0:12:31.65:166,32,0	1/1:5,5:9:18.51:194,19,0	1/1:4,15:17:42.06:415,42,0	1/1:11,15:27:50.73:475,51,0	0/1:18,0:18:16.82:17,0,28	0/1:21,0:18:22.39:25,0,22	0/0:25,0:25:33.08:0,33,130	1/1:6,0:13:14.59:93,15,0	1/1:8,12:17:33.08:364,33,0	1/1:6,17:21:51.13:547,51,0	1/1:1,9:7:10.26:127,10,0
chr10	44716481	.	G	GT	6956.07	PASS	AB=1.000;AC=45;AF=0.804;AN=56;BaseQRankSum=10.097;DP=568;FS=1.753;HRun=2;HaplotypeScore=123.7730;InbreedingCoeff=0.8629;MQ=79.96;MQ0=1;MQRankSum=-7.270;QD=15.63;ReadPosRankSum=5.589;VQSLOD=5.0103;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:40,0:40:84.87:526,85,0	1/1:0,13:14:27.09:376,27,0	0/0:22,0:21:45.83:0,46,620	0/0:23,0:22:35.80:0,36,453	1/1:22,0:19:35.12:216,35,0	0/0:27,0:26:72.19:0,72,851	0/0:25,0:25:75.17:0,75,875	0/1:35,0:35:56.05:208,0,56	0/0:26,0:26:69.18:0,69,824	1/1:7,0:4:11.78:77,12,0	1/1:10,0:8:8.91:61,9,0	1/1:23,0:23:42.17:369,42,0	1/1:19,0:19:50.48:363,50,0	1/1:25,0:25:68.17:465,68,0	1/1:17,0:14:40.62:241,41,0	1/1:14,0:13:38.31:239,38,0	1/1:1,30:31:78.26:1089,78,0	1/1:13,0:13:38.18:230,38,0	1/1:12,0:12:32.17:192,32,0	1/1:17,0:15:38.17:231,38,0	1/1:21,0:21:38.63:242,39,0	1/1:20,0:20:46.48:333,46,0	1/1:21,0:18:47.63:378,48,0	1/1:24,0:24:38:361,38,0	1/1:9,0:8:17.41:105,17,0	1/1:18,0:15:40.90:241,41,0	1/1:22,0:20:52.70:322,53,0	1/1:10,0:7:14.72:91,15,0
chr10	44716483	.	T	TG	12373.71	PASS	AB=1.000;AC=43;AF=0.768;AN=56;BaseQRankSum=7.246;DP=569;FS=3.754;HRun=1;HaplotypeScore=104.3123;InbreedingCoeff=0.8780;MQ=80.53;MQ0=1;MQRankSum=-5.917;QD=29.89;ReadPosRankSum=7.230;VQSLOD=4.2952;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,36:39:81.20:1116,81,0	0/1:15,0:14:24.24:147,0,24	0/0:22,0:21:55.60:0,56,637	0/0:25,0:24:23.27:0,23,457	1/1:2,15:19:36.06:445,36,0	0/0:25,0:25:69.21:0,69,881	0/0:26,0:26:75.24:0,75,970	0/0:33,0:33:91.23:0,91,638	0/0:24,0:24:69.21:0,69,879	1/1:2,5:4:12.03:157,12,0	1/1:1,9:8:9.03:110,9,0	1/1:1,22:24:60.03:864,60,0	1/1:1,18:19:51.17:757,51,0	1/1:0,24:24:69.23:1030,69,0	1/1:2,15:14:42.09:540,42,0	1/1:3,11:13:39.13:544,39,0	1/1:31,0:31:76.29:461,76,0	1/1:2,11:13:39.13:554,39,0	1/1:0,12:12:36.12:513,36,0	1/1:1,16:15:39.12:497,39,0	1/1:4,20:24:42.61:593,43,0	1/1:2,18:20:51.08:706,51,0	1/1:1,20:18:48.16:714,48,0	1/1:1,23:24:60.19:881,60,0	1/1:3,7:9:15.05:202,15,0	1/1:5,13:15:45.11:605,45,0	1/1:0,21:20:54.13:727,54,0	1/1:0,10:7:15.05:210,15,0
chr10	44717036	.	G	GA	83.84	PASS	AB=0.927;AC=3;AF=0.054;AN=56;BaseQRankSum=4.412;DP=922;FS=3.698;HRun=0;HaplotypeScore=89.6657;InbreedingCoeff=0.4614;MQ=43.64;MQ0=224;MQRankSum=3.326;QD=1.18;ReadPosRankSum=-1.793;VQSLOD=1.8096;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:32:24.04:0,24,311	0/0:18,0:14:33.11:0,33,460	1/1:31,2:4:7.21:63,7,0	0/1:35,3:6:26.46:117,0,26	0/0:29,0:22:30.04:0,30,419	0/0:17,0:17:18.06:0,18,252	0/0:31,0:24:54.05:0,54,742	0/0:35,0:14:42.14:0,42,587	0/0:31,0:31:38.60:0,39,521	0/0:47,0:28:81.27:0,81,1132	0/0:22,0:10:6.02:0,6,84	0/0:38,0:32:26.65:0,27,329	0/0:33,0:28:30.44:0,30,419	0/0:64,0:58:75.03:0,75,1002	0/0:57,0:40:57.16:0,57,779	0/0:36,0:19:18.06:0,18,252	0/0:42,0:31:39.13:0,39,543	0/0:37,0:26:30.08:0,30,418	0/0:36,0:11:33.11:0,33,461	0/0:16,0:14:33.06:0,33,460	0/0:41,0:27:36.12:0,36,503	0/0:14,0:12:8.90:0,9,125	0/0:20,0:17:20.91:0,21,271	0/0:32,0:23:30.10:0,30,418	0/0:25,0:22:33.11:0,33,453	0/0:38,0:29:84.28:0,84,1175	0/0:30,0:28:26.97:0,27,375	0/0:9,0:9:6.02:0,6,84
chr10	44717900	.	CT	C	262.44	PASS	AB=0.786;AC=2;AF=0.036;AN=56;BaseQRankSum=3.060;DP=556;FS=2.212;HRun=4;HaplotypeScore=80.2263;InbreedingCoeff=-0.0581;MQ=48.29;MQ0=48;MQRankSum=1.505;QD=3.92;ReadPosRankSum=0.315;VQSLOD=-0.1525;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:15:39.12:0,39,529	0/1:20,6:22:99:123,0,469	0/0:17,0:6:15.05:0,15,193	0/0:24,0:3:9.03:0,9,126	0/0:24,0:24:54.18:0,54,755	0/0:23,0:23:63.21:0,63,875	0/0:11,0:11:33.10:0,33,447	0/0:31,0:31:84.27:0,84,1135	0/0:20,0:20:57.19:0,57,798	0/0:19,0:19:57.14:0,57,755	0/0:20,0:19:45.15:0,45,630	0/0:15,0:4:9.03:0,9,119	0/0:14,0:6:12.04:0,12,168	0/0:9,0:4:6.02:0,6,84	0/0:27,0:24:60.20:0,60,833	0/0:19,0:18:48.12:0,48,650	0/1:28,13:40:99:228,0,800	0/0:23,0:20:42.14:0,42,585	0/0:19,0:17:45.10:0,45,583	0/0:32,0:31:75.20:0,75,1007	0/0:13,0:13:36.12:0,36,501	0/0:16,0:6:12.04:0,12,159	0/0:17,0:7:12.04:0,12,161	0/0:3,0:1:3.01:0,3,42	0/0:21,0:21:54.18:0,54,741	0/0:21,0:19:51.13:0,51,670	0/0:30,0:28:72.22:0,72,959	0/0:5,0:5:9.03:0,9,123
chr10	44718013	.	CA	C	280.02	PASS	AB=0.762;AC=2;AF=0.036;AN=56;BaseQRankSum=5.853;DP=639;FS=0.914;HRun=3;HaplotypeScore=62.8293;InbreedingCoeff=-0.0397;MQ=52.85;MQ0=66;MQRankSum=-2.223;QD=4.83;ReadPosRankSum=-1.491;VQSLOD=-0.1840;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:36.06:0,36,475	0/1:11,11:21:99:226,0,360	0/0:15,0:5:15.05:0,15,200	0/0:19,0:11:9.63:0,10,294	0/0:26,0:21:60.15:0,60,786	0/0:26,0:26:78.18:0,78,1078	0/0:16,0:16:45.15:0,45,648	0/0:28,0:24:69.19:0,69,934	0/0:25,0:25:75.25:0,75,1079	0/0:33,0:27:81.27:0,81,1165	0/0:16,0:14:39.09:0,39,537	0/0:19,0:15:42.14:0,42,604	0/0:17,0:13:30.10:0,30,431	0/0:14,0:10:30.10:0,30,432	0/0:21,0:19:57.11:0,57,772	0/0:30,0:28:81.19:0,81,1086	0/1:30,6:35:99:143,0,991	0/0:20,0:20:54.16:0,54,754	0/0:34,0:31:93.30:0,93,1306	0/0:46,0:39:99:0,117,1681	0/0:8,0:8:24.08:0,24,344	0/0:10,0:9:27.09:0,27,388	0/0:24,0:18:54.08:0,54,728	0/0:18,0:16:45.15:0,45,646	0/0:20,0:16:48.16:0,48,690	0/0:30,0:29:81.27:0,81,1166	0/0:35,0:32:90.29:0,90,1275	0/0:18,0:14:39.06:0,39,536
chr10	44718806	.	AGAGCTGG	A	3570.18	PASS	AC=26;AF=0.520;AN=50;BaseQRankSum=6.347;DP=571;FS=64.438;HRun=0;HaplotypeScore=96.2706;InbreedingCoeff=0.8818;MQ=31.08;MQ0=207;MQRankSum=-7.651;QD=19.30;ReadPosRankSum=-1.094;VQSLOD=0.1659;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,13:14:18.06:448,18,0	0/0:25,0:19:51.18:0,51,1715	./.	./.	1/1:4,12:11:9.03:236,9,0	0/0:24,0:17:42.10:0,42,1516	0/0:18,0:13:20.99:0,21,595	0/0:28,0:13:39.13:0,39,1522	0/0:16,0:14:33.11:0,33,1329	1/1:3,5:5:12.03:264,12,0	1/1:7,5:5:6.02:158,6,0	0/0:21,0:11:30.06:0,30,1108	0/0:26,0:22:57.20:0,57,2230	0/0:20,0:15:36.04:0,36,1244	1/1:0,12:9:18.06:473,18,0	1/1:5,6:1:3.01:79,3,0	0/0:83,0:48:99:0,111,4113	1/1:6,6:6:9.03:214,9,0	1/1:5,7:9:15:281,15,0	1/1:4,14:9:18.01:413,18,0	1/1:17,5:9:6.02:115,6,0	0/0:22,0:17:45.15:0,45,1726	0/0:24,0:17:27.09:0,27,1088	0/0:35,0:20:51.18:0,51,2046	1/1:6,8:6:15.05:369,15,0	1/1:4,8:8:21.02:442,21,0	1/1:3,12:7:2.97:79,3,0	./.
chr10	44718974	.	AC	A	889.69	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=2.939;DP=603;FS=19.038;HRun=1;HaplotypeScore=75.4004;InbreedingCoeff=0.8164;MQ=49.15;MQ0=25;MQRankSum=1.823;QD=15.89;ReadPosRankSum=1.346;VQSLOD=2.4319;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:38:74.95:0,75,1051	1/1:8,5:8:24.03:296,24,0	0/0:30,0:6:18.02:0,18,246	0/1:14,0:2:8.11:9,0,8	0/0:26,0:25:36.12:0,36,556	0/0:20,0:20:60.13:0,60,878	0/0:17,0:17:51.17:0,51,814	0/0:26,0:26:78.23:0,78,1160	0/0:22,0:22:60.15:0,60,885	0/0:25,0:21:63.17:0,63,976	0/0:17,0:16:30.10:0,30,476	0/0:18,0:17:42.07:0,42,617	0/0:26,0:25:57.05:0,57,827	0/0:11,0:11:30.10:0,30,479	0/0:20,0:14:39.11:0,39,597	0/0:18,0:12:33.04:0,33,474	1/1:10,19:20:51.17:711,51,0	0/0:23,0:22:53.94:0,54,772	0/0:11,0:10:30.09:0,30,423	0/0:29,0:28:59.78:0,60,827	0/0:12,0:10:24.06:0,24,359	0/0:33,0:33:57.10:0,57,831	0/0:29,0:28:45.09:0,45,665	0/0:17,0:17:44.82:0,45,615	0/0:20,0:15:27.09:0,27,427	0/0:15,0:13:30.10:0,30,466	0/0:25,0:16:26.82:0,27,418	0/0:16,0:13:15.05:0,15,239
chr10	44719023	.	G	GTTT	1973.67	PASS	AB=0.767;AC=31;AF=0.554;AN=56;BaseQRankSum=10.060;DP=560;FS=8.518;HRun=10;HaplotypeScore=122.2263;InbreedingCoeff=0.3897;MQ=54.66;MQ0=15;MQRankSum=-6.034;QD=4.93;ReadPosRankSum=-0.372;VQSLOD=-0.2552;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:8,1:37:47.85:569,48,0	1/1:7,0:10:5.34:98,5,0	0/0:7,0:7:8.96:0,9,93	0/0:10,0:8:11.89:0,12,121	1/1:4,0:26:6.02:84,6,0	0/0:25,0:25:57.05:0,57,691	0/0:18,0:19:52.52:0,53,652	0/0:28,0:28:61.38:0,61,720	0/0:22,0:22:51.10:0,51,620	0/1:26,0:24:47:47,0,166	0/1:19,0:19:42.57:43,0,53	1/1:3,0:14:9.97:23,10,0	1/1:2,0:17:19:44,19,0	1/1:1,0:14:14.20:49,14,0	0/0:12,0:10:20.75:0,21,138	0/0:16,0:14:29.33:0,29,217	0/1:18,0:21:5.17:87,0,5	0/0:19,0:19:2.63:0,3,146	1/1:5,0:11:24.07:313,24,0	1/1:2,1:21:22.56:324,23,0	1/1:1,0:6:2.99:24,3,0	1/1:2,0:29:26.27:104,26,0	0/1:8,0:26:24.06:24,0,87	0/1:3,0:23:22.02:22,0,41	0/1:22,0:18:10.11:10,0,140	0/1:7,0:13:13.51:133,0,14	1/1:4,0:12:3.48:43,3,0	1/1:4,0:8:9.50:126,10,0
chr10	44719032	.	TTC	T	387.68	PASS	AB=0.960;AC=12;AF=0.214;AN=56;BaseQRankSum=0.798;DP=506;FS=6.590;HRun=0;HaplotypeScore=104.6893;InbreedingCoeff=0.0823;MQ=58.26;MQ0=12;MQRankSum=-2.321;QD=2.67;ReadPosRankSum=-6.683;VQSLOD=-0.7318;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:24:6.78:0,7,75	0/1:13,2:12:9.04:83,0,9	0/0:13,0:13:26.02:0,26,323	0/0:8,1:9:3.30:0,3,143	0/1:11,0:11:8.74:41,0,9	0/0:25,0:25:72.21:0,72,1238	0/0:19,0:19:57.19:0,57,1039	0/0:30,0:29:87.24:0,87,1389	0/0:23,0:23:63.18:0,63,1073	0/0:24,0:22:16.29:0,16,260	0/0:18,0:18:2.40:0,2,105	0/0:16,0:15:33.08:0,33,387	0/0:20,0:19:54.09:0,54,619	0/0:17,0:16:36.09:0,36,417	0/1:12,0:10:2.02:2,0,112	0/0:15,0:13:7.83:0,8,207	0/1:24,8:22:72.04:109,0,72	0/1:16,0:16:32.51:33,0,148	0/1:10,0:6:7.83:19,0,8	0/1:14,0:14:19.27:84,0,19	1/1:3,0:1:2.04:6,2,0	0/0:29,0:29:57.16:0,57,676	0/0:25,0:24:41.87:0,42,529	0/0:23,0:23:60.05:0,60,760	0/0:23,0:18:29.68:0,30,178	0/1:12,0:8:36.06:42,0,36	1/1:20,0:8:8.31:113,8,0	0/0:5,0:5:6.07:0,6,18
chr10	44719612	.	GGTACAGGTAGAACA	G	5804.01	PASS	AB=0.969;AC=13;AF=0.232;AN=56;BaseQRankSum=10.470;DP=726;FS=72.418;HRun=0;HaplotypeScore=292.5805;InbreedingCoeff=0.8624;MQ=57.69;MQ0=4;MQRankSum=-9.739;QD=48.37;ReadPosRankSum=0.470;VQSLOD=1.7275;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:59,0:58:99:0,166,9385	0/0:16,0:16:48.16:0,48,3066	0/0:27,0:24:69.21:0,69,4172	0/0:26,0:25:69.24:0,69,3311	0/0:31,0:31:69.70:0,70,3891	0/0:30,0:30:90.27:0,90,5852	0/0:22,0:22:66.23:0,66,4283	0/0:33,0:33:99:0,99,5857	0/0:35,0:35:99:0,105,6969	1/1:2,15:14:31.35:1148,31,0	1/1:1,14:14:33.11:1326,33,0	0/0:30,0:30:90.30:0,90,6075	0/0:31,0:31:93.32:0,93,6228	0/0:25,0:25:75.26:0,75,5004	1/1:3,22:15:24.08:1002,24,0	1/1:2,14:11:21.07:877,21,0	0/0:31,0:27:63.22:0,63,4552	1/1:1,1:1:3.01:125,3,0	0/0:17,0:16:45.15:0,45,2513	0/0:32,0:32:96.32:0,96,5018	0/0:28,0:28:72.72:0,73,4162	0/0:28,0:28:84.29:0,84,5844	0/0:22,0:22:66.23:0,66,4252	0/0:30,0:30:90.31:0,90,6131	1/1:1,13:10:30.10:1260,30,0	0/1:30,1:31:66.03:66,0,4260	0/0:37,0:37:99:0,108,6437	0/0:16,0:16:45.15:0,45,1995
chr10	44720744	.	TA	T	3044.93	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=4.473;DP=520;FS=3.482;HRun=9;HaplotypeScore=76.6311;InbreedingCoeff=0.9918;MQ=59.90;MQ0=8;MQRankSum=-1.090;QD=21.29;ReadPosRankSum=1.723;VQSLOD=4.6062;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,10:12:30.01:275,30,0	0/0:5,7:5:15.03:0,15,163	0/0:12,0:7:18.01:0,18,174	0/0:17,0:17:47.95:0,48,506	1/1:2,25:27:75.04:686,75,0	0/0:29,0:29:81.23:0,81,926	0/0:17,0:17:42.11:0,42,475	0/0:35,0:35:96.25:0,96,1080	0/0:19,0:19:48.14:0,48,554	0/0:19,0:19:43.69:0,44,254	0/0:16,0:16:35.47:0,35,228	0/0:17,0:17:45.13:0,45,512	0/0:17,0:17:45.12:0,45,507	0/0:19,0:18:44.97:0,45,498	0/0:29,0:29:76.89:0,77,495	0/0:25,0:25:65.13:0,65,442	0/0:9,2:8:15.04:0,15,173	0/0:13,0:13:32.63:0,33,227	1/1:2,7:9:21.01:192,21,0	1/1:5,17:22:51.02:467,51,0	1/1:1,19:20:54.03:494,54,0	0/0:18,0:18:51.15:0,51,589	0/0:18,0:18:42.12:0,42,485	0/0:11,0:11:30.09:0,30,346	0/0:23,0:22:47.28:0,47,302	1/1:3,19:22:24:447,24,0	1/1:1,19:20:51.03:467,51,0	1/1:1,9:11:26.05:225,26,0
chr10	44721171	.	A	AT	2374.46	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=5.166;DP=461;FS=3.600;HRun=7;HaplotypeScore=93.8106;InbreedingCoeff=0.9781;MQ=65.77;MQ0=0;MQRankSum=0.217;QD=29.68;ReadPosRankSum=1.762;VQSLOD=3.8207;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:36.06:0,36,348	0/0:9,0:9:21.02:0,21,199	0/0:9,0:9:7.55:0,8,159	0/0:11,0:11:20.36:0,20,217	0/0:28,0:28:72.08:0,72,686	0/0:24,0:24:63.09:0,63,603	0/0:9,0:9:21.03:0,21,203	0/0:18,0:18:48.04:0,48,451	0/0:22,0:22:60.10:0,60,579	0/0:25,0:25:72.11:0,72,692	0/0:29,0:29:81.04:0,81,764	1/1:2,14:16:45.13:532,45,0	1/1:0,14:14:42.13:507,42,0	1/1:3,10:13:30.09:362,30,0	0/0:12,0:12:33.04:0,33,312	0/0:16,0:16:42.07:0,42,406	0/0:12,0:11:33:0,33,300	0/0:18,0:18:45.07:0,45,434	0/0:16,0:15:42.05:0,42,399	0/0:29,0:29:78.08:0,78,745	0/0:12,0:12:33.05:0,33,319	1/1:1,13:14:36.11:435,36,0	1/1:0,17:17:45.14:544,45,0	1/1:1,5:6:15.05:181,15,0	0/0:17,0:17:48.08:0,48,463	0/0:20,0:20:60.08:0,60,574	0/0:18,0:18:48.08:0,48,463	0/0:14,0:15:32.08:0,32,296
chr10	44721682	.	TATGTATATTGTATATGTATA	T	13000.33	PASS	AC=42;AF=0.808;AN=52;BaseQRankSum=10.629;DP=378;FS=2.503;HRun=0;HaplotypeScore=148.6095;InbreedingCoeff=0.6903;MQ=67.33;MQ0=26;MQRankSum=-10.325;QD=47.45;ReadPosRankSum=4.550;VQSLOD=4.0523;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,4:3:6.02:292,6,0	1/1:0,4:3:6.02:296,6,0	0/0:21,0:20:60.21:0,60,2821	0/0:11,0:11:23.02:0,23,1287	1/1:6,18:13:12:359,12,0	0/0:28,0:28:84.29:0,84,7339	0/0:14,0:14:42.14:0,42,3478	1/1:3,10:10:21.01:436,21,0	0/0:26,0:26:78.27:0,78,6157	1/1:11,21:20:45.13:2144,45,0	1/1:5,9:8:18.06:913,18,0	1/1:2,6:6:9.03:492,9,0	1/1:1,12:6:9.03:515,9,0	1/1:3,7:6:9.03:512,9,0	1/1:6,9:10:27.09:1445,27,0	1/1:14,10:13:4.11:1473,4,0	1/1:2,3:4:6.02:343,6,0	1/1:0,2:1:3.01:172,3,0	1/1:4,4:5:11.99:355,12,0	1/1:5,17:7:6.02:319,6,0	1/1:1,1:1:3.01:99,3,0	1/1:8,8:10:12.04:598,12,0	1/1:4,8:8:6.02:288,6,0	./.	1/1:0,5:2:3.01:147,3,0	1/1:4,10:5:6.02:343,6,0	1/1:3,23:19:30.10:1461,30,0	./.
chr10	44721683	.	A	AAGG	2974.97	PASS	AB=0.867;AC=41;AF=0.788;AN=52;BaseQRankSum=10.261;DP=326;FS=0.601;HRun=0;HaplotypeScore=100.7982;InbreedingCoeff=0.5729;MQ=72.02;MQ0=16;MQRankSum=-9.731;QD=13.52;ReadPosRankSum=3.466;VQSLOD=3.2087;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:3:6.02:147,6,0	1/1:4,0:3:6.02:147,6,0	0/0:22,0:21:57.19:0,57,1007	0/0:11,0:11:25.14:0,25,519	1/1:18,2:11:12:234,12,0	0/0:28,0:28:84.29:0,84,1566	0/0:15,0:15:42.12:0,42,741	1/1:10,1:9:18.04:295,18,0	0/0:26,0:26:78.27:0,78,1443	1/1:21,1:17:14.41:163,14,0	1/1:9,4:8:8.99:214,9,0	1/1:6,2:6:7.88:91,8,0	1/1:12,1:6:3.73:11,4,0	1/1:8,1:6:4.50:58,5,0	1/1:9,4:10:16.20:330,16,0	0/1:11,2:11:8.98:169,0,9	1/1:3,1:3:2.68:11,3,0	1/1:2,0:1:1.55:4,2,0	1/1:4,1:4:12.01:216,12,0	1/1:17,1:6:3.01:74,3,0	1/1:1,0:1:3.01:71,3,0	1/1:8,2:7:8.60:220,9,0	1/1:8,0:5:6.02:147,6,0	./.	1/1:5,0:2:3.01:73,3,0	1/1:10,1:3:3.48:38,3,0	1/1:23,2:19:18.54:430,19,0	./.
chr10	44721686	.	T	TA	868.80	PASS	AB=0.859;AC=25;AF=0.481;AN=52;BaseQRankSum=3.332;DP=329;FS=3.450;HRun=1;HaplotypeScore=99.8233;InbreedingCoeff=0.2972;MQ=71.00;MQ0=16;MQRankSum=-6.546;QD=4.83;ReadPosRankSum=-1.256;VQSLOD=0.0721;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:3:6.01:63,6,0	1/1:4,1:3:6.02:69,6,0	0/0:21,0:20:51.14:0,51,641	0/0:12,0:12:33.08:0,33,400	1/1:18,2:11:9.02:111,9,0	0/0:30,0:30:90.28:0,90,1154	0/0:16,0:16:45.13:0,45,569	1/1:10,1:9:6.02:77,6,0	0/0:27,0:27:72.22:0,72,920	0/1:21,1:17:12.18:12,0,49	0/1:9,4:8:5.29:82,0,5	0/1:6,2:6:6.51:28,0,7	0/0:12,1:6:6.66:0,7,21	0/0:8,1:6:6.29:0,6,19	0/1:9,4:10:11.35:104,0,11	0/1:10,2:10:27.04:49,0,27	0/0:3,1:3:4.44:0,4,14	0/0:2,0:1:2.22:0,2,7	1/1:4,1:4:6.02:77,6,0	0/1:17,1:6:1.76:27,0,2	1/1:1,0:1:3.01:42,3,0	1/1:8,2:7:4.24:77,4,0	1/1:8,0:5:6.01:57,6,0	./.	1/1:5,0:2:3.01:31,3,0	0/0:10,1:3:1.86:0,2,7	0/1:23,1:19:4.09:125,0,4	./.
chr10	44721691	.	TG	T	1143.18	PASS	AC=42;AF=0.808;AN=52;BaseQRankSum=11.312;DP=326;FS=2.687;HRun=1;HaplotypeScore=98.3282;InbreedingCoeff=0.6539;MQ=68.89;MQ0=16;MQRankSum=-11.418;QD=5.22;ReadPosRankSum=5.484;VQSLOD=0.8251;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:3:6.01:61,6,0	1/1:4,1:3:6.02:65,6,0	0/0:17,0:16:47.63:0,48,621	0/0:12,0:12:33.06:0,33,441	1/1:18,1:11:3.94:28,4,0	0/0:32,0:32:96.30:0,96,1486	0/0:18,0:18:54.15:0,54,816	1/1:10,0:9:6.02:73,6,0	0/0:24,0:24:72.23:0,72,1127	1/1:21,0:17:27.43:114,27,0	1/1:9,2:8:15.55:94,16,0	1/1:6,2:6:7.45:48,7,0	1/1:12,1:6:6.66:21,7,0	1/1:8,0:6:6.66:21,7,0	1/1:9,4:10:23.13:159,23,0	1/1:10,2:10:21.56:116,22,0	1/1:3,0:3:4.44:14,4,0	1/1:2,0:1:2.22:7,2,0	1/1:4,1:4:6.02:73,6,0	1/1:17,1:6:5.23:38,5,0	1/1:1,0:1:0.47:1,0,0	1/1:8,2:7:11.21:88,11,0	1/1:8,0:5:6.01:58,6,0	./.	1/1:5,0:2:3.01:31,3,0	1/1:10,0:3:4.59:14,5,0	1/1:23,2:19:23.89:184,24,0	./.
chr10	44722310	.	TA	T	10820.96	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=10.159;DP=545;FS=12.405;HRun=7;HaplotypeScore=58.2502;InbreedingCoeff=0.9901;MQ=72.32;MQ0=0;MQRankSum=-1.157;QD=26.26;ReadPosRankSum=4.510;VQSLOD=4.5468;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,16:17:45.10:459,45,0	1/1:3,6:9:14.62:153,15,0	0/0:13,0:13:18.05:0,18,213	0/0:19,0:15:14.61:0,15,186	1/1:2,34:36:93.21:949,93,0	0/0:30,0:30:75.20:0,75,905	0/0:14,0:14:39.12:0,39,491	0/0:32,0:32:87.26:0,87,1073	0/0:23,0:23:69.22:0,69,868	1/1:5,25:30:75.14:755,75,0	1/1:1,17:18:48.10:489,48,0	1/1:2,12:14:33.07:337,33,0	1/1:1,23:24:60.14:612,60,0	1/1:3,18:21:51.12:520,51,0	1/1:0,29:29:78.18:796,78,0	1/1:0,16:16:42.10:429,42,0	1/1:1,13:14:36.08:367,36,0	1/1:0,7:7:21.05:214,21,0	1/1:1,10:11:29.81:287,30,0	1/1:0,13:13:36.08:367,36,0	1/1:1,18:19:51.12:520,51,0	1/1:3,13:16:39.09:398,39,0	1/1:3,13:16:39.09:398,39,0	1/1:0,13:13:39.09:398,39,0	1/1:1,20:21:60.13:612,60,0	1/1:3,20:23:57.10:568,57,0	1/1:3,30:33:81.18:826,81,0	1/1:0,12:12:36.08:367,36,0
chr10	44723276	.	C	CAA	5821.47	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-8.450;DP=640;FS=3.047;HRun=10;HaplotypeScore=87.8175;InbreedingCoeff=0.9977;MQ=61.95;MQ0=10;MQRankSum=0.077;QD=28.26;ReadPosRankSum=1.490;VQSLOD=5.2449;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:29:59.58:0,60,715	1/1:9,0:9:23.94:196,24,0	0/0:22,0:13:26.99:0,27,252	0/0:19,0:13:18.17:0,18,221	0/0:27,0:28:71.88:0,72,785	0/0:29,0:31:80.61:0,81,779	0/0:12,0:12:24.03:0,24,244	1/1:5,15:20:51.15:733,51,0	0/0:19,0:21:59.60:0,60,573	0/0:6,0:26:56.87:0,57,242	0/0:1,0:16:38.41:0,38,166	1/1:4,25:29:54.07:805,54,0	1/1:4,23:25:47.95:715,48,0	1/1:4,17:23:52.64:698,53,0	0/0:3,0:29:68.61:0,69,297	0/0:2,0:14:32.93:0,33,142	1/1:23,0:23:47.84:380,48,0	0/0:1,0:12:30.34:0,30,138	0/0:30,0:30:62.57:0,63,674	0/0:36,0:36:90.13:0,90,909	0/0:16,0:16:45.10:0,45,458	1/1:6,18:24:48.16:717,48,0	1/1:2,22:26:61.67:831,62,0	1/1:3,19:22:51.17:746,51,0	0/0:1,0:25:57.63:0,58,249	0/0:20,0:21:50.82:0,51,500	0/0:30,0:32:77.55:0,78,737	0/0:11,0:11:27.06:0,27,275
chr10	44723280	.	A	AAAG	1494.79	PASS	AB=1.000;AC=12;AF=0.214;AN=56;BaseQRankSum=10.080;DP=639;FS=3.369;HRun=0;HaplotypeScore=115.6520;InbreedingCoeff=0.3738;MQ=62.40;MQ0=4;MQRankSum=-0.338;QD=7.15;ReadPosRankSum=4.030;VQSLOD=2.8884;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:80.84:0,81,1245	1/1:2,8:11:24.07:491,24,0	0/0:19,0:13:26.25:0,26,455	0/0:17,0:13:38.94:0,39,489	0/0:29,0:29:87.06:0,87,1356	0/0:31,0:31:90.23:0,90,1370	0/0:12,0:12:30.08:0,30,449	0/1:21,0:20:26.36:42,0,26	0/0:21,0:21:63.20:0,63,980	0/0:27,0:27:69.11:0,69,673	0/0:17,0:17:45.03:0,45,430	0/1:29,0:28:24.40:24,0,25	0/1:28,0:26:17.79:22,0,18	0/1:24,0:23:14.16:14,0,34	0/0:29,0:29:81.12:0,81,784	0/0:13,0:13:36.06:0,36,352	1/1:2,24:26:48.15:996,48,0	0/0:12,0:12:33.06:0,33,332	0/0:32,0:31:80.99:0,81,1228	0/0:37,0:37:99:0,105,1615	0/0:16,0:16:48.15:0,48,769	1/1:19,0:19:19.93:47,20,0	0/1:27,0:27:12.08:12,0,56	0/1:24,0:24:14.58:15,0,51	0/0:25,0:25:66.10:0,66,641	0/0:22,0:22:57.18:0,57,880	0/0:32,0:32:87.24:0,87,1311	0/0:10,0:10:27.09:0,27,447
chr10	44723526	.	TA	T	1233.80	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=10.077;DP=692;FS=3.886;HRun=3;HaplotypeScore=81.4257;InbreedingCoeff=0.9986;MQ=66.64;MQ0=2;MQRankSum=0.275;QD=22.85;ReadPosRankSum=-0.005;VQSLOD=3.0269;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,114,1641	1/1:0,10:10:24.07:297,24,0	0/0:35,0:32:93.30:0,93,1308	0/0:27,0:23:69.21:0,69,938	0/0:29,0:28:75.24:0,75,1062	0/0:13,0:13:39.13:0,39,560	0/0:19,0:19:57.16:0,57,784	0/0:46,0:46:99:0,135,1911	0/0:25,0:25:72.23:0,72,1017	0/0:23,0:23:66.20:0,66,922	0/0:17,0:17:48.16:0,48,690	0/0:26,0:26:75.25:0,75,1080	0/0:25,0:25:75.25:0,75,1065	0/0:34,0:34:99:0,102,1452	0/0:25,0:25:75.25:0,75,1079	0/0:21,0:21:60.20:0,60,863	1/1:2,42:43:90.11:1058,90,0	0/0:13,0:13:36.07:0,36,490	0/0:26,0:25:63.20:0,63,890	0/0:22,0:22:66.22:0,66,950	0/0:34,0:34:99:0,99,1404	0/0:19,0:19:57.16:0,57,783	0/0:17,0:17:51.17:0,51,733	0/0:19,0:17:51.17:0,51,734	0/0:25,0:25:69.23:0,69,993	0/0:22,0:22:60.20:0,60,864	0/0:28,0:28:81.26:0,81,1147	0/0:10,0:9:30.10:0,30,432
chr10	44723720	.	C	CTTT	6861.78	PASS	AB=0.592;AC=44;AF=0.786;AN=56;BaseQRankSum=5.014;DP=530;FS=0.000;HRun=10;HaplotypeScore=103.7978;InbreedingCoeff=0.7384;MQ=74.96;MQ0=2;MQRankSum=-2.510;QD=15.39;ReadPosRankSum=0.630;VQSLOD=2.6094;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,0:40:69.59:515,70,0	1/1:3,0:10:6.23:14,6,0	0/0:20,0:19:20.61:0,21,303	0/0:8,0:8:8.95:0,9,93	1/1:4,1:19:35.88:334,36,0	0/0:13,0:13:39.11:0,39,463	0/0:22,0:22:54.07:0,54,644	0/1:10,0:28:32.93:353,0,33	0/0:21,0:21:45.04:0,45,547	1/1:3,14:20:43.30:690,43,0	1/1:5,12:21:44.54:628,45,0	1/1:1,0:15:14.95:35,15,0	1/1:2,0:12:11.21:26,11,0	0/1:5,0:19:16.69:17,0,19	1/1:3,10:17:33.03:512,33,0	1/1:1,8:13:21:354,21,0	1/1:10,0:25:25.93:161,26,0	1/1:3,5:10:18.06:331,18,0	1/1:4,0:26:62.30:504,62,0	1/1:5,0:25:50.22:358,50,0	1/1:2,0:12:28.14:208,28,0	1/1:2,1:21:21.70:101,22,0	1/1:6,0:19:13.71:32,14,0	1/1:2,0:11:11.21:26,11,0	1/1:5,15:25:52.27:784,52,0	1/1:7,0:26:55.37:438,55,0	1/1:2,0:19:34.12:254,34,0	1/1:1,0:12:25.15:186,25,0
chr10	44723724	.	T	TA	157.51	PASS	AB=0.973;AC=9;AF=0.161;AN=56;BaseQRankSum=0.374;DP=512;FS=0.429;HRun=0;HaplotypeScore=95.3553;InbreedingCoeff=0.1183;MQ=70.54;MQ0=2;MQRankSum=-0.342;QD=1.27;ReadPosRankSum=4.873;VQSLOD=1.6248;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:75:0,75,524	0/1:10,1:11:9.42:9,0,39	0/0:17,0:16:45.03:0,45,523	0/0:5,0:5:12.04:0,12,156	0/0:18,0:18:36.90:0,37,243	0/0:13,0:13:39.13:0,39,544	0/0:21,0:21:63.15:0,63,826	0/0:28,0:29:65.63:0,66,495	0/0:19,0:19:57.15:0,57,733	0/0:23,0:23:57.05:0,57,413	0/0:20,0:20:45.84:0,46,285	1/1:14,0:14:18.66:48,19,0	0/1:12,0:12:20.51:21,0,32	0/1:17,0:17:29.98:30,0,66	0/0:16,0:16:32.19:0,32,201	0/0:13,0:13:22.58:0,23,131	0/1:22,3:25:28.90:97,0,29	0/0:9,0:9:17.49:0,17,107	0/0:25,0:25:49.68:0,50,356	0/0:24,0:24:41.18:0,41,295	0/0:11,0:11:26.29:0,26,186	0/1:19,0:19:29.28:29,0,42	0/1:16,0:16:39.53:40,0,47	0/1:10,0:10:5.54:29,0,6	0/0:28,0:27:51.83:0,52,326	0/0:26,0:26:61.10:0,61,387	0/0:20,0:20:37.60:0,38,258	0/0:12,0:12:23.35:0,23,168
chr10	44723726	.	T	TTTG	1433.24	PASS	AB=0.992;AC=19;AF=0.339;AN=56;BaseQRankSum=8.385;DP=501;FS=2.178;HRun=0;HaplotypeScore=107.0068;InbreedingCoeff=-0.0905;MQ=67.32;MQ0=2;MQRankSum=-1.539;QD=4.32;ReadPosRankSum=5.399;VQSLOD=1.2483;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:37,0:37:23.67:24,0,58	0/0:8,1:9:16.39:0,16,84	0/0:14,0:13:33.01:0,33,448	0/0:4,0:4:12.03:0,12,170	0/1:18,0:18:46.52:60,0,47	0/0:13,0:13:39.13:0,39,621	0/0:22,0:22:66.14:0,66,956	0/1:28,0:28:7.77:8,0,221	0/0:19,0:19:57.16:0,57,826	0/1:22,0:22:90.89:253,0,91	0/1:20,0:20:18.45:245,0,18	0/0:14,0:14:32.14:0,32,138	0/0:11,0:11:23.94:0,24,103	0/0:16,0:16:38.14:0,38,210	0/1:17,0:17:25.07:194,0,25	1/1:13,0:13:19.15:192,19,0	0/1:22,3:25:84.42:84,0,148	0/1:9,0:9:23.78:117,0,24	0/1:24,0:24:20.96:40,0,21	0/1:25,0:25:0.30:0,0,84	1/1:10,0:10:2.43:15,2,0	0/0:21,0:21:19.43:0,19,182	0/0:16,0:16:38.36:0,38,200	0/0:10,0:10:27.10:0,27,127	0/1:28,0:27:74.95:323,0,75	0/1:25,0:25:15.21:15,0,109	0/1:19,0:19:13.27:13,0,18	1/1:12,0:12:1.18:12,1,0
chr10	44724039	.	G	GT	740.31	PASS	AB=0.714;AC=3;AF=0.054;AN=56;BaseQRankSum=1.219;DP=431;FS=0.758;HRun=2;HaplotypeScore=89.2714;InbreedingCoeff=0.5390;MQ=56.19;MQ0=0;MQRankSum=-1.709;QD=28.47;ReadPosRankSum=-0.427;VQSLOD=3.1345;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:59.83:0,60,698	0/1:3,2:5:62.14:74,0,62	0/0:15,0:10:27.07:0,27,318	0/0:17,0:10:12.56:0,13,244	0/0:17,0:16:33.10:0,33,404	0/0:12,0:12:36.09:0,36,431	0/0:16,0:16:45.11:0,45,531	0/0:37,0:35:83.43:0,83,1028	0/0:17,0:17:48.15:0,48,590	0/0:10,0:8:23.94:0,24,245	0/0:8,0:7:12.04:0,12,150	0/0:10,0:10:27.02:0,27,312	0/0:8,0:8:20.98:0,21,219	0/0:11,0:11:21.04:0,21,234	0/0:16,0:16:31.99:0,32,398	0/0:6,0:6:9.95:0,10,145	1/1:5,16:21:54.17:772,54,0	0/0:11,0:10:7.94:0,8,201	0/0:12,0:10:30.09:0,30,371	0/0:16,0:16:42.03:0,42,485	0/0:14,0:14:24.94:0,25,285	0/0:17,0:16:38.96:0,39,418	0/0:17,0:17:45.14:0,45,551	0/0:21,0:21:46:0,46,534	0/0:16,0:15:14.39:0,14,241	0/0:20,0:20:60.10:0,60,737	0/0:24,0:24:56.96:0,57,664	0/0:5,0:5:8.86:0,9,88
chr10	44724045	.	C	CTTT	7074.79	PASS	AB=0.616;AC=44;AF=0.786;AN=56;BaseQRankSum=2.863;DP=501;FS=23.868;HRun=11;HaplotypeScore=96.0864;InbreedingCoeff=0.7383;MQ=58.42;MQ0=0;MQRankSum=-0.882;QD=16.80;ReadPosRankSum=-1.233;VQSLOD=1.3106;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,27:37:50.89:802,51,0	1/1:5,0:7:5.94:28,6,0	0/0:16,0:13:27.33:0,27,327	0/0:15,0:11:13.83:0,14,136	1/1:3,16:21:43.24:562,43,0	0/0:12,0:13:32.94:0,33,355	0/0:15,0:16:35.95:0,36,403	0/1:16,0:31:3.77:97,0,4	0/0:16,0:17:51.07:0,51,562	1/1:4,4:15:30:340,30,0	1/1:1,1:16:23.91:245,24,0	1/1:5,7:12:12.04:199,12,0	1/1:3,8:12:15.05:257,15,0	1/1:2,11:13:15.05:282,15,0	1/1:1,0:17:30.10:429,30,0	1/1:2,0:11:6.01:72,6,0	0/1:5,0:20:2.43:84,0,2	1/1:6,3:17:2.40:100,2,0	1/1:9,1:13:20.99:219,21,0	1/1:5,11:18:32.95:431,33,0	1/1:3,12:16:8.96:131,9,0	1/1:3,12:18:24.03:356,24,0	1/1:8,15:24:24.02:382,24,0	1/1:14,9:23:30.08:483,30,0	1/1:2,2:16:18.02:244,18,0	1/1:6,13:25:43.22:477,43,0	1/1:5,18:25:44.75:764,45,0	1/1:3,0:4:9:92,9,0
chr10	44724400	.	C	CTT	6933.06	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=8.740;DP=432;FS=7.946;HRun=9;HaplotypeScore=75.8264;InbreedingCoeff=0.9900;MQ=59.00;MQ0=6;MQRankSum=-2.199;QD=26.56;ReadPosRankSum=0.876;VQSLOD=4.3405;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,17:24:45.15:675,45,0	1/1:0,5:5:15.05:231,15,0	0/0:13,0:11:26.43:0,26,260	0/0:18,0:12:21.23:0,21,188	1/1:4,7:11:21.03:295,21,0	0/0:20,0:19:54.13:0,54,574	0/0:11,0:11:24.05:0,24,255	1/1:8,0:35:69.05:280,69,0	0/0:19,0:19:54.08:0,54,561	1/1:15,0:15:36.06:376,36,0	1/1:7,0:7:15.02:152,15,0	0/0:13,0:13:36.09:0,36,383	0/0:18,0:17:42.10:0,42,445	0/0:19,0:19:45.11:0,45,479	1/1:12,0:11:24.03:253,24,0	1/1:12,0:11:27.07:304,27,0	1/1:3,18:20:45.11:666,45,0	1/1:12,0:12:30.07:315,30,0	1/1:4,17:17:48.14:699,48,0	1/1:2,7:10:21.03:297,21,0	1/1:2,7:9:15.05:231,15,0	0/0:13,0:13:27.05:0,27,287	0/0:15,0:14:33.06:0,33,351	0/0:10,0:10:30.02:0,30,305	1/1:11,0:11:27.05:274,27,0	1/1:4,14:17:46.97:693,47,0	1/1:8,16:24:48.08:685,48,0	1/1:1,12:12:33.11:508,33,0
chr10	44724409	.	T	TTA	5079.92	PASS	AB=0.992;AC=28;AF=0.500;AN=56;BaseQRankSum=10.332;DP=433;FS=2.443;HRun=0;HaplotypeScore=74.9963;InbreedingCoeff=0.5596;MQ=55.38;MQ0=14;MQRankSum=-0.637;QD=20.16;ReadPosRankSum=4.528;VQSLOD=4.7322;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:24:48.29:296,0,48	1/1:5,0:5:14.96:123,15,0	0/0:16,0:9:26.58:0,27,347	0/0:22,0:9:21.43:0,21,237	0/1:10,0:10:23.87:115,0,24	0/0:21,0:19:54.18:0,54,767	0/0:9,0:9:24.08:0,24,342	0/1:31,0:29:62.14:62,0,71	0/0:20,0:19:54.18:0,54,764	1/1:0,14:15:36.12:663,36,0	1/1:0,9:9:15.05:276,15,0	0/0:14,0:13:36.10:0,36,491	0/0:22,0:17:42.14:0,42,598	0/0:19,0:18:47.75:0,48,649	1/1:0,11:10:24.08:431,24,0	1/1:0,11:10:27.09:500,27,0	1/1:18,0:17:14.20:294,14,0	1/1:0,11:11:30.10:553,30,0	1/1:20,0:15:43.60:277,44,0	0/1:12,0:12:25.89:132,0,26	1/1:7,0:7:14.90:111,15,0	0/0:12,0:12:27.09:0,27,382	0/0:16,0:15:36.04:0,36,484	0/0:10,0:10:30.10:0,30,422	1/1:0,11:12:27.09:494,27,0	0/1:19,1:19:24.94:273,0,25	0/1:22,0:22:39.66:252,0,40	1/1:13,0:12:16.90:227,17,0
chr10	44724585	.	TTTTTTCCA	T	2335.42	PASS	AC=10;AF=0.227;AN=44;BaseQRankSum=6.232;DP=368;FS=0.000;HRun=0;HaplotypeScore=42.5744;InbreedingCoeff=0.7078;MQ=18.50;MQ0=220;MQRankSum=-1.013;QD=53.08;ReadPosRankSum=0.778;VQSLOD=2.7378;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:2:3.01:0,3,120	0/0:4,0:4:12.04:0,12,478	./.	./.	0/0:20,0:16:39.13:0,39,1719	0/0:27,0:6:12.04:0,12,451	0/0:17,0:1:3.01:0,3,138	0/0:14,0:1:3.01:0,3,63	0/0:13,0:6:9.03:0,9,415	1/1:3,13:10:30.10:886,30,0	1/1:2,9:9:24.08:710,24,0	0/0:11,0:6:8.94:0,9,413	0/0:14,0:3:9.03:0,9,413	0/0:15,0:6:6.02:0,6,198	1/1:2,1:1:3.01:89,3,0	1/1:3,5:5:15.05:444,15,0	0/0:34,0:2:5.98:0,6,158	./.	./.	0/0:10,0:8:24.08:0,24,1108	./.	0/0:6,0:6:9.03:0,9,333	0/0:19,0:18:30.10:0,30,1338	./.	1/1:2,4:4:12.04:355,12,0	0/0:11,0:4:12.04:0,12,554	0/0:17,0:7:15.05:0,15,693	0/0:14,0:6:18.06:0,18,826
chr10	44724641	.	GTA	G	145.16	PASS	AC=6;AF=0.333;AN=18;BaseQRankSum=-2.646;DP=260;FS=0.000;HRun=0;HaplotypeScore=17.3133;MQ=11.59;MQ0=215;MQRankSum=0.106;QD=5.58;ReadPosRankSum=-0.529;VQSLOD=1.3730;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/0:0,0:1:3:0,3,27	./.	./.	1/1:6,2:3:3.01:39,3,0	./.	./.	./.	./.	0/0:6,0:3:6.02:0,6,102	0/0:3,0:2:2.92:0,3,17	./.	./.	./.	./.	./.	./.	0/0:19,0:1:3.01:0,3,51	./.	1/1:3,1:2:2.97:20,3,0	./.	./.	0/0:4,0:3:3.01:0,3,36	./.	0/0:8,0:4:9.03:0,9,124	./.	./.	1/1:9,5:5:15.01:177,15,0
chr10	44726099	.	C	CT	12445.40	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=15.445;DP=620;FS=1.745;HRun=2;HaplotypeScore=87.9578;InbreedingCoeff=0.9988;MQ=60.81;MQ0=5;MQRankSum=-2.642;QD=38.06;ReadPosRankSum=3.851;VQSLOD=5.3106;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,34:35:99:1400,99,0	1/1:0,14:14:36.12:518,36,0	0/0:26,0:20:43.22:0,43,587	0/0:28,1:26:48.98:0,49,791	1/1:1,19:19:54.18:777,54,0	0/0:26,0:26:57.18:0,57,705	0/0:18,0:18:54.14:0,54,643	0/0:38,0:35:99:0,99,1216	0/0:29,0:29:78.24:0,78,965	1/1:2,33:34:96.31:1363,96,0	1/1:1,15:16:39.09:538,39,0	0/0:15,0:15:45.14:0,45,557	0/0:23,0:23:66.21:0,66,815	0/0:24,0:24:66.18:0,66,801	1/1:2,19:21:48.16:690,48,0	1/1:0,19:20:54.18:772,54,0	1/1:2,17:19:57.15:796,57,0	1/1:0,6:6:18.06:259,18,0	1/1:0,13:13:39.13:562,39,0	1/1:2,20:22:60.20:858,60,0	1/1:2,15:17:45.15:648,45,0	0/0:26,0:26:69.22:0,69,852	0/0:21,0:21:57.18:0,57,705	0/0:18,0:18:54.17:0,54,668	1/1:2,12:14:36.12:518,36,0	1/1:1,27:25:75.24:1064,75,0	1/1:4,30:34:78.05:1121,78,0	1/1:0,13:13:39.13:561,39,0
chr10	44726196	.	G	GT	777.46	PASS	AB=0.768;AC=2;AF=0.036;AN=56;BaseQRankSum=5.422;DP=715;FS=13.639;HRun=2;HaplotypeScore=98.0822;InbreedingCoeff=-0.0370;MQ=59.06;MQ0=0;MQRankSum=-0.922;QD=11.78;ReadPosRankSum=-0.364;VQSLOD=0.8845;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,1:30:44.18:0,44,985	0/1:13,3:16:81.21:81,0,434	0/0:21,0:18:50.87:0,51,579	0/0:28,1:27:68.82:0,69,790	0/0:24,0:24:69.13:0,69,834	0/0:36,0:36:99:0,99,1172	0/0:18,0:18:54.13:0,54,640	0/0:30,0:30:78.24:0,78,956	0/0:25,0:25:72.23:0,72,891	0/0:29,0:29:81.19:0,81,984	0/0:32,0:32:87.16:0,87,1031	0/0:16,0:16:42.13:0,42,520	0/0:21,0:21:63.20:0,63,778	0/0:22,0:22:63.13:0,63,761	0/0:18,0:18:45.11:0,45,531	0/0:21,0:21:51.16:0,51,631	0/1:28,22:50:99:785,0,788	0/0:14,0:14:42.13:0,42,520	0/0:17,0:16:45.14:0,45,558	0/0:26,0:26:75.24:0,75,928	0/0:43,0:43:99:0,126,1522	0/0:23,0:23:60.19:0,60,742	0/0:34,0:34:93.26:0,93,1125	0/0:20,0:20:57.16:0,57,692	0/0:27,0:27:72.23:0,72,889	0/0:26,0:26:72.23:0,72,892	0/0:32,0:32:87.15:0,87,1059	0/0:15,0:15:45.13:0,45,544
chr10	44726534	.	G	GT	4448.09	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-10.778;DP=640;FS=1.644;HRun=8;HaplotypeScore=58.0901;InbreedingCoeff=0.9933;MQ=58.22;MQ0=2;MQRankSum=2.049;QD=26.64;ReadPosRankSum=4.155;VQSLOD=5.4742;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:18:47.98:0,48,429	1/1:0,5:5:12.04:138,12,0	0/0:18,0:15:33:0,33,296	0/0:18,0:13:24.01:0,24,220	0/0:41,0:41:99:0,114,1038	0/0:21,0:21:45.02:0,45,412	0/0:11,0:11:30.01:0,30,275	0/0:39,0:39:90.03:0,90,819	0/0:21,0:21:57.03:0,57,522	0/0:40,0:40:99:0,114,1040	0/0:30,0:30:72.01:0,72,658	1/1:6,16:22:48.14:553,48,0	1/1:0,15:15:42.12:485,42,0	1/1:2,14:16:45.13:517,45,0	0/0:26,0:26:60.01:0,60,549	0/0:19,0:19:57.01:0,57,516	1/1:7,29:35:72.17:816,72,0	0/0:11,0:11:23.99:0,24,219	0/0:25,0:22:57:0,57,513	0/0:31,0:31:90.03:0,90,819	0/0:14,0:14:36.02:0,36,330	1/1:0,24:24:66.20:762,66,0	1/1:6,23:28:63.19:727,63,0	1/1:3,17:20:39.12:450,39,0	0/0:32,0:32:87.04:0,87,796	0/0:21,0:21:60.02:0,60,545	0/0:26,0:25:66.02:0,66,604	0/0:9,0:9:21.01:0,21,192
chr10	44726773	.	GA	G	798.26	PASS	AB=0.920;AC=5;AF=0.089;AN=56;BaseQRankSum=8.469;DP=610;FS=0.000;HRun=4;HaplotypeScore=72.7011;InbreedingCoeff=0.7784;MQ=61.96;MQ0=5;MQRankSum=1.841;QD=15.06;ReadPosRankSum=1.412;VQSLOD=2.6780;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:81.26:0,81,1119	1/1:1,13:14:39.12:468,39,0	0/1:21,2:6:27.88:28,0,102	0/0:17,0:9:21.33:0,21,216	0/0:29,0:29:84.27:0,84,1158	0/0:31,0:31:90.28:0,90,1230	0/0:15,0:15:42.12:0,42,570	0/0:32,0:32:87.24:0,87,1171	0/0:20,0:20:60.17:0,60,806	0/0:37,0:37:99:0,111,1553	0/0:29,0:29:78.25:0,78,1076	0/0:17,0:17:48.15:0,48,655	0/0:21,0:21:63.20:0,63,866	0/0:13,0:13:36.12:0,36,504	0/0:24,0:24:72.23:0,72,991	0/0:17,0:17:48.15:0,48,654	1/1:2,14:16:36.11:432,36,0	0/0:9,0:8:24.06:0,24,318	0/0:18,0:16:45.15:0,45,630	0/0:28,0:28:84.28:0,84,1176	0/0:12,0:12:36.12:0,36,504	0/0:27,0:27:81.26:0,81,1114	0/0:34,0:34:99:0,99,1371	0/0:11,0:11:33.11:0,33,462	0/0:24,0:24:69.23:0,69,966	0/0:18,0:18:54.18:0,54,756	0/0:29,0:27:84.28:0,84,1176	0/0:16,0:16:48.16:0,48,672
chr10	44728000	.	A	AT	4732.55	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=3.027;DP=554;FS=0.368;HRun=8;HaplotypeScore=60.0464;InbreedingCoeff=0.9859;MQ=56.74;MQ0=8;MQRankSum=0.789;QD=24.65;ReadPosRankSum=0.622;VQSLOD=5.4851;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,26:30:63.05:707,63,0	0/0:9,0:9:24.01:0,24,220	0/0:10,0:5:11.96:0,12,98	0/0:15,0:11:30.01:0,30,273	1/1:4,22:25:57.17:657,57,0	0/0:29,0:29:87.05:0,87,796	0/0:10,0:10:21:0,21,192	0/0:33,0:30:78.02:0,78,704	0/0:18,0:18:42.02:0,42,384	0/0:24,0:23:60.03:0,60,549	0/0:24,0:24:63.03:0,63,577	0/0:11,0:11:27.01:0,27,247	0/0:11,0:11:27.01:0,27,247	0/0:16,1:17:10.45:0,10,349	0/0:19,0:19:51.03:0,51,467	0/0:13,0:13:36.02:0,36,330	0/0:24,0:24:62.87:0,63,563	0/0:28,0:27:65.06:0,65,582	1/1:15,9:16:30.08:338,30,0	1/1:3,29:31:81.24:932,81,0	1/1:3,13:16:30.09:346,30,0	0/0:14,0:14:36.02:0,36,329	0/0:17,0:17:48.03:0,48,439	0/0:16,0:16:42.02:0,42,384	0/0:19,0:19:45.01:0,45,412	1/1:0,18:19:57:638,57,0	1/1:5,22:26:41.74:734,42,0	1/1:2,16:17:33.10:381,33,0
chr10	44728632	.	GCTGC	G	1020.34	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.498;DP=543;FS=4.420;HRun=0;HaplotypeScore=114.3454;InbreedingCoeff=0.9872;MQ=56.04;MQ0=9;MQRankSum=-7.287;QD=44.36;ReadPosRankSum=1.963;VQSLOD=4.3506;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,154,4356	1/1:0,6:6:15.05:290,15,0	0/0:38,0:13:39.13:0,39,997	0/0:28,0:9:27.09:0,27,653	0/0:17,0:17:51.17:0,51,1436	0/0:23,0:23:69.24:0,69,1995	0/0:9,0:9:27.09:0,27,782	0/0:23,0:22:66.23:0,66,1892	0/0:10,0:10:30.10:0,30,869	0/0:22,0:22:66.23:0,66,1860	0/0:23,0:23:66.23:0,66,1912	0/0:16,0:16:48.16:0,48,1391	0/0:8,0:8:24.08:0,24,695	0/0:13,0:13:39.13:0,39,1130	0/0:14,0:14:39.13:0,39,1091	0/0:16,0:16:48.16:0,48,1391	1/1:1,16:17:45.15:848,45,0	0/0:18,0:17:54.19:0,54,1564	0/0:26,0:25:72.25:0,72,1998	0/0:15,0:14:42.14:0,42,1219	0/0:31,0:31:93.30:0,93,2551	0/0:15,0:15:45.14:0,45,1226	0/0:19,0:18:50.96:0,51,1438	0/0:15,0:15:38.80:0,39,1013	0/0:15,0:15:45.15:0,45,1303	0/0:17,0:16:48.16:0,48,1352	0/0:29,0:29:87.28:0,87,2458	0/0:7,0:7:21.07:0,21,608
chr10	44729890	.	C	CTTTGTTTTTTT	2406.59	PASS	AB=1.000;AC=20;AF=0.357;AN=56;BaseQRankSum=5.673;DP=430;FS=4.848;HRun=0;HaplotypeScore=150.3857;InbreedingCoeff=0.6639;MQ=63.13;MQ0=0;MQRankSum=-7.439;QD=15.04;ReadPosRankSum=-0.750;VQSLOD=2.4504;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:6,0:6:6.02:199,6,0	1/1:4,0:5:9.08:26,9,0	0/0:17,0:16:38.48:0,38,928	0/0:16,0:15:24.05:0,24,598	1/1:19,0:19:15.01:366,15,0	0/0:12,0:12:27.07:0,27,861	0/0:15,0:15:33.09:0,33,1013	0/0:29,0:29:66.13:0,66,1633	0/0:12,0:12:30.05:0,30,886	0/1:18,0:18:32.44:32,0,242	0/0:26,0:26:18.96:0,19,540	0/0:13,0:13:39.12:0,39,1111	0/0:19,0:19:54.15:0,54,1567	0/0:17,0:17:36.10:0,36,1071	0/1:17,0:17:28.90:29,0,247	0/0:11,0:11:27.05:0,27,353	0/1:14,0:15:0.13:33,0,0	0/0:18,0:18:23.65:0,24,228	1/1:11,2:17:29.95:450,30,0	1/1:15,0:15:12.01:345,12,0	1/1:6,0:6:5.93:40,6,0	0/0:19,0:19:48.01:0,48,1313	0/0:21,0:21:48.12:0,48,1448	0/0:18,0:17:51.07:0,51,1448	0/0:7,0:7:17.08:0,17,174	0/1:11,0:11:12.34:446,0,12	1/1:24,0:23:53.55:380,54,0	1/1:7,0:7:6.02:257,6,0
chr10	44729894	.	G	GTT	4430.59	PASS	AB=0.522;AC=29;AF=0.518;AN=56;BaseQRankSum=10.873;DP=466;FS=4.616;HRun=7;HaplotypeScore=75.1129;InbreedingCoeff=0.8546;MQ=61.95;MQ0=0;MQRankSum=-3.585;QD=17.72;ReadPosRankSum=0.542;VQSLOD=2.4637;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,0:11:3:29,3,0	1/1:1,0:6:15.02:144,15,0	0/0:17,0:15:44.49:0,44,488	0/0:12,0:11:24.06:0,24,271	1/1:2,0:25:13.12:108,13,0	0/0:14,0:14:36.07:0,36,407	0/0:16,0:16:39.09:0,39,442	0/0:32,0:32:81.13:0,81,894	0/0:12,0:12:36.11:0,36,415	1/1:3,14:18:42.10:634,42,0	1/1:2,24:26:66.19:1053,66,0	0/0:14,0:14:39.04:0,39,443	0/0:18,0:18:54.14:0,54,618	0/0:15,0:15:36.09:0,36,409	1/1:4,13:17:33.11:539,33,0	0/1:1,11:12:7.87:367,0,8	1/1:5,0:21:18.03:174,18,0	1/1:5,13:18:24.08:394,24,0	1/1:12,0:12:17.47:139,17,0	1/1:0,0:25:17.70:139,18,0	0/0:5,0:5:0.20:0,0,0	0/0:20,0:20:51.12:0,51,580	0/0:23,0:23:48.11:0,48,559	0/0:18,0:17:51.15:0,51,593	1/1:2,6:9:18.06:295,18,0	1/1:2,1:18:37.89:304,38,0	1/1:24,0:23:7.41:54,7,0	1/1:1,0:7:6.01:58,6,0
chr10	44731031	.	CAT	C	5854.43	PASS	AB=0.518;AC=11;AF=0.196;AN=56;BaseQRankSum=11.650;DP=628;FS=2.661;HRun=0;HaplotypeScore=77.9888;InbreedingCoeff=0.8861;MQ=52.93;MQ0=5;MQRankSum=-0.644;QD=43.37;ReadPosRankSum=3.122;VQSLOD=6.6544;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:63.21:0,63,1217	0/0:13,0:13:39.13:0,39,791	0/0:15,0:10:30.10:0,30,568	0/0:18,0:11:33.10:0,33,585	0/0:28,0:28:78.18:0,78,1530	0/0:28,0:28:81.26:0,81,1596	0/0:13,0:13:39.09:0,39,738	0/0:30,0:25:75.26:0,75,1473	0/0:28,0:28:84.22:0,84,1624	1/1:0,34:34:99:1583,99,0	1/1:0,26:26:69.24:1124,69,0	0/0:11,0:11:33.11:0,33,654	0/0:18,0:18:54.12:0,54,1041	0/0:29,0:29:84.29:0,84,1669	1/1:0,15:15:42.14:684,42,0	1/1:0,11:11:27.09:440,27,0	0/0:31,0:31:84.29:0,84,1681	0/1:2,27:29:30.53:1095,0,31	0/0:17,0:15:45.15:0,45,854	0/0:41,0:41:99:0,120,2308	0/0:17,0:17:51.17:0,51,1007	0/0:30,0:30:87.29:0,87,1703	0/0:22,0:22:60.21:0,60,1218	0/0:9,0:9:27.09:0,27,509	1/1:0,20:19:57.19:929,57,0	0/0:25,1:26:29.31:0,29,1471	0/0:33,0:33:93.32:0,93,1771	0/0:12,0:12:36.12:0,36,712
chr10	44731302	.	TC	T	579.86	PASS	AC=4;AF=0.083;AN=48;BaseQRankSum=3.716;DP=415;FS=28.951;HRun=1;HaplotypeScore=112.1960;InbreedingCoeff=0.9574;MQ=50.08;MQ0=2;MQRankSum=-5.603;QD=32.21;ReadPosRankSum=-1.315;VQSLOD=1.4365;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:57.18:0,57,847	0/0:6,0:6:18.06:0,18,275	0/0:13,0:10:30.08:0,30,424	0/0:4,0:3:9.03:0,9,138	0/0:33,0:33:93.12:0,93,1323	0/0:13,0:13:36.12:0,36,548	0/0:6,0:6:18.06:0,18,266	0/0:14,0:13:39.13:0,39,593	0/0:16,0:16:45.12:0,45,635	0/0:25,0:25:75.25:0,75,1128	0/0:37,0:37:99:0,99,1492	./.	./.	./.	0/0:8,0:8:21.07:0,21,320	0/0:12,0:12:30.10:0,30,457	0/0:19,0:19:37.38:0,37,758	0/0:20,0:20:60.14:0,60,869	0/0:12,0:12:36.08:0,36,518	0/0:29,0:29:87.21:0,87,1298	0/0:18,0:18:51.16:0,51,759	1/1:1,9:10:30.10:411,30,0	1/1:0,8:8:21.07:287,21,0	./.	0/0:15,0:15:45.07:0,45,659	0/0:21,0:21:63.17:0,63,938	0/0:26,0:26:72.24:0,72,1055	0/0:31,0:31:93.23:0,93,1382
chr10	44731307	.	TA	T	312.07	PASS	AC=4;AF=0.083;AN=48;BaseQRankSum=5.306;DP=410;FS=33.541;HRun=1;HaplotypeScore=111.6504;InbreedingCoeff=0.9657;MQ=51.03;MQ0=2;MQRankSum=-5.291;QD=26.01;ReadPosRankSum=0.063;VQSLOD=1.6042;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:63.12:0,63,783	0/0:6,0:6:18.05:0,18,246	0/0:13,0:9:27.08:0,27,402	0/0:5,0:4:12.03:0,12,166	0/0:31,0:31:86.39:0,86,1129	0/0:15,0:15:45.15:0,45,717	0/0:7,0:7:21.07:0,21,335	0/0:13,0:13:39.13:0,39,615	0/0:15,0:15:42.14:0,42,658	0/0:26,0:26:78.22:0,78,1174	0/0:34,0:34:99:0,102,1608	./.	./.	./.	0/0:8,0:8:24.04:0,24,355	0/0:12,0:12:33.11:0,33,500	0/0:19,0:19:57.09:0,57,682	0/0:20,0:20:60.20:0,60,944	0/0:12,0:12:36.11:0,36,496	0/0:32,0:32:93.30:0,93,1356	0/0:20,0:20:57.16:0,57,787	1/1:0,7:7:21.06:249,21,0	1/1:0,5:5:15.05:178,15,0	./.	0/0:15,0:15:45.15:0,45,719	0/0:20,0:20:60.20:0,60,875	0/0:23,0:23:60.02:0,60,581	0/0:30,0:30:90.28:0,90,1263
chr10	44731311	.	AT	A	5217.55	PASS	AB=1.000;AC=21;AF=0.477;AN=44;BaseQRankSum=5.946;DP=413;FS=4.109;HRun=8;HaplotypeScore=87.6265;InbreedingCoeff=0.8630;MQ=55.46;MQ0=1;MQRankSum=0.871;QD=22.98;ReadPosRankSum=1.095;VQSLOD=5.3911;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,23:24:60.09:579,60,0	1/1:1,5:6:15.02:145,15,0	0/0:13,0:9:8.29:0,8,130	0/0:6,0:5:12.04:0,12,145	1/1:4,24:28:71.91:662,72,0	0/0:15,0:15:33.10:0,33,398	0/0:8,0:8:21.06:0,21,253	0/0:15,0:15:18.94:0,19,196	0/0:17,0:17:48.03:0,48,532	0/0:25,0:25:2.91:0,3,262	0/0:32,0:32:86.51:0,87,499	./.	./.	./.	0/0:8,0:8:20.66:0,21,133	0/1:12,0:12:8.03:8,0,148	1/1:3,17:20:27.51:440,28,0	0/0:20,0:20:28.59:0,29,257	1/1:2,10:12:33.04:313,33,0	1/1:4,27:31:59.16:696,59,0	1/1:0,20:20:57.09:550,57,0	./.	./.	./.	0/0:15,0:15:37.88:0,38,243	1/1:4,16:20:12.66:411,13,0	1/1:1,23:24:60.08:574,60,0	1/1:1,29:30:87.14:840,87,0
chr10	44731808	.	A	AT	3847.98	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-10.280;DP=687;FS=0.852;HRun=4;HaplotypeScore=72.2565;InbreedingCoeff=0.8972;MQ=52.25;MQ0=16;MQRankSum=0.852;QD=28.93;ReadPosRankSum=2.286;VQSLOD=3.7074;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:38:99:0,105,1191	0/0:15,0:15:45.12:0,45,502	0/0:18,0:4:9.02:0,9,97	0/0:17,0:3:3.01:0,3,34	0/0:20,0:20:60.16:0,60,670	0/0:22,0:22:63.16:0,63,705	0/0:20,0:20:54.12:0,54,592	0/0:29,0:23:60.15:0,60,669	0/0:19,0:19:48.12:0,48,536	1/1:1,30:24:66.22:901,66,0	1/1:1,20:17:14.08:560,14,0	0/0:15,0:14:39.11:0,39,442	0/0:16,0:15:39.10:0,39,432	0/0:23,0:22:63.15:0,63,694	1/1:2,23:24:60.20:820,60,0	1/1:1,11:11:30.10:410,30,0	0/0:65,0:56:99:0,135,1520	1/1:3,15:15:0.33:377,0,0	0/0:20,0:15:39.08:0,39,424	0/0:38,0:38:99:0,105,1171	0/0:16,0:16:42.12:0,42,476	0/0:23,0:23:57.16:0,57,646	0/0:29,0:29:72.19:0,72,806	0/0:39,0:39:99:0,99,1106	1/1:2,24:23:57.19:779,57,0	0/0:26,0:26:78.21:0,78,871	0/0:29,0:29:78.22:0,78,883	0/0:13,0:13:33.09:0,33,374
chr10	44733809	.	G	GA	12207.57	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=5.935;DP=549;FS=1.988;HRun=6;HaplotypeScore=99.8676;InbreedingCoeff=0.9940;MQ=74.89;MQ0=0;MQRankSum=-6.178;QD=27.81;ReadPosRankSum=4.200;VQSLOD=4.9392;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,26:30:79.60:960,80,0	1/1:2,9:11:30.10:377,30,0	0/0:31,0:30:81.11:0,81,796	0/0:27,0:25:47.07:0,47,487	1/1:3,24:27:62.03:737,62,0	0/0:10,0:10:24.05:0,24,245	0/0:17,0:17:51.11:0,51,514	1/1:4,21:25:63.16:764,63,0	0/0:25,0:25:63.12:0,63,635	1/1:1,26:27:75.19:913,75,0	1/1:3,26:29:69.14:847,69,0	1/1:14,0:14:38.79:295,39,0	1/1:12,0:12:35.84:289,36,0	1/1:24,0:24:59.49:422,59,0	1/1:2,12:14:33.11:415,33,0	1/1:3,13:16:39.12:491,39,0	1/1:1,26:27:69.22:868,69,0	1/1:0,8:8:21.07:264,21,0	1/1:0,8:8:24.07:294,24,0	1/1:2,24:26:69.22:850,69,0	1/1:5,11:16:30.09:369,30,0	1/1:22,0:22:59.67:455,60,0	1/1:18,0:18:41.80:326,42,0	1/1:26,0:25:74.53:542,75,0	1/1:2,13:15:36.12:453,36,0	1/1:2,11:12:33.08:389,33,0	1/1:4,22:25:60.10:704,60,0	1/1:0,5:5:15.05:182,15,0
chr10	44733812	.	A	AT	7017.81	PASS	AB=1.000;AC=40;AF=0.714;AN=56;BaseQRankSum=7.981;DP=536;FS=0.378;HRun=0;HaplotypeScore=115.3047;InbreedingCoeff=0.4513;MQ=75.91;MQ0=0;MQRankSum=-3.195;QD=16.36;ReadPosRankSum=8.786;VQSLOD=6.3245;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:30:2.57:204,3,0	1/1:11,0:11:3.01:86,3,0	0/0:32,0:31:87.13:0,87,1131	0/0:24,0:22:59.93:0,60,764	0/1:26,0:26:8:142,0,8	0/0:10,0:10:30.08:0,30,389	0/0:17,0:17:51.17:0,51,713	0/1:27,0:27:21.43:114,0,21	0/0:24,0:24:69.16:0,69,923	1/1:27,0:27:8.71:157,9,0	1/1:27,0:27:23.82:225,24,0	1/1:0,14:14:39.13:596,39,0	1/1:0,12:12:36.12:548,36,0	1/1:0,22:22:60.20:909,60,0	1/1:13,0:13:29.22:119,29,0	1/1:13,0:13:33.90:129,34,0	1/1:27,0:27:61.53:253,62,0	1/1:8,0:8:19.12:82,19,0	1/1:8,0:8:19.92:72,20,0	0/1:26,0:26:3.27:219,0,3	0/1:15,0:15:45.18:70,0,45	1/1:0,22:22:60.20:907,60,0	1/1:0,18:18:42.14:641,42,0	1/1:0,25:25:75.25:1148,75,0	1/1:13,0:13:32.70:151,33,0	0/1:14,0:13:17.17:60,0,17	0/1:26,0:25:12.49:140,0,12	1/1:5,0:5:12.76:48,13,0
chr10	44734170	.	A	AT	10343.92	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=3.702;DP=463;FS=6.512;HRun=1;HaplotypeScore=241.6391;InbreedingCoeff=0.8354;MQ=40.12;MQ0=0;MQRankSum=-4.044;QD=23.09;ReadPosRankSum=3.025;VQSLOD=4.3426;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,10:18:41.39:324,41,0	1/1:7,0:7:21.07:260,21,0	0/0:9,0:8:12.02:0,12,120	0/0:6,0:5:6.02:0,6,73	1/1:2,30:32:84.57:595,85,0	1/1:3,18:21:63.21:915,63,0	1/1:4,3:7:12.04:170,12,0	1/1:8,16:22:63.20:882,63,0	1/1:1,13:14:36.12:525,36,0	1/1:8,19:27:80.10:710,80,0	1/1:5,20:25:72.37:496,72,0	1/1:2,11:13:37.77:220,38,0	1/1:6,11:17:46.82:326,47,0	1/1:1,9:10:27.57:191,28,0	1/1:2,12:14:41.21:275,41,0	1/1:1,17:18:50.45:407,50,0	1/1:12,3:15:33.10:414,33,0	1/1:2,7:9:23.98:227,24,0	1/1:7,9:15:38.95:358,39,0	1/1:5,26:31:79.67:623,80,0	1/1:4,1:5:6.01:60,6,0	1/1:4,13:17:49.02:281,49,0	1/1:3,26:29:80.86:498,81,0	1/1:3,3:6:11.79:80,12,0	1/1:4,18:21:62.11:452,62,0	1/1:3,18:21:62.72:501,63,0	1/1:6,19:25:65.58:445,66,0	1/1:0,5:5:14.89:109,15,0
chr10	44734173	.	T	TGAA	2126.25	PASS	AB=1.000;AC=45;AF=0.833;AN=54;BaseQRankSum=0.512;DP=363;FS=26.791;HRun=0;HaplotypeScore=240.4895;InbreedingCoeff=0.4594;MQ=38.56;MQ0=0;MQRankSum=-2.206;QD=6.46;ReadPosRankSum=0.349;VQSLOD=1.6306;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:11:5.84:14,6,0	1/1:0,5:5:15.05:254,15,0	0/0:7,0:6:9.01:0,9,89	0/0:5,0:4:6.01:0,6,63	0/1:28,0:28:15.34:42,0,15	1/1:18,0:18:38.25:118,38,0	1/1:3,0:3:6.11:18,6,0	1/1:15,0:13:30.85:118,31,0	1/1:12,0:12:22.32:66,22,0	1/1:20,0:20:44.10:209,44,0	0/0:20,0:20:11.37:0,11,31	1/1:12,0:12:11.62:59,12,0	1/1:12,0:12:13.67:54,14,0	0/1:9,0:10:3.31:22,0,3	1/1:12,0:12:6.65:17,7,0	1/1:16,0:16:23.07:92,23,0	1/1:1,8:9:27.04:408,27,0	1/1:7,0:7:15.68:75,16,0	1/1:10,0:10:26.28:116,26,0	1/1:25,0:25:28.35:195,28,0	./.	1/1:13,0:13:1.92:14,2,0	0/1:26,0:26:1.42:33,0,1	1/1:4,0:4:1.38:20,1,0	1/1:18,0:18:15.36:60,15,0	1/1:17,0:17:41.41:171,41,0	1/1:21,0:21:13.97:56,14,0	1/1:5,0:5:10.28:33,10,0
chr10	44736771	.	A	AT	9985.79	PASS	AB=0.714;AC=43;AF=0.935;AN=46;BaseQRankSum=-2.575;DP=309;FS=10.388;HRun=1;HaplotypeScore=45.5994;InbreedingCoeff=0.2692;MQ=52.12;MQ0=9;MQRankSum=-0.601;QD=35.41;ReadPosRankSum=2.259;VQSLOD=4.0085;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,10:9:27.09:404,27,0	1/1:1,7:7:18.06:270,18,0	0/1:6,4:6:32.83:97,0,33	0/0:4,6:4:0.89:0,1,2	1/1:1,16:16:45.15:674,45,0	1/1:0,21:21:60.20:899,60,0	1/1:1,9:8:12.04:180,12,0	1/1:2,14:11:30.10:448,30,0	1/1:1,19:19:51.14:740,51,0	1/1:0,6:1:3.01:45,3,0	./.	1/1:0,16:16:48.16:719,48,0	1/1:0,10:10:30.10:449,30,0	1/1:0,21:20:57.19:853,57,0	./.	./.	1/1:0,11:10:30.07:425,30,0	./.	1/1:0,8:6:18.04:248,18,0	1/1:0,18:15:42.14:629,42,0	1/1:0,8:8:21.07:314,21,0	1/1:1,12:13:33.07:469,33,0	1/1:0,18:18:45.15:674,45,0	1/1:0,8:8:21.07:314,21,0	./.	1/1:2,14:15:42.12:601,42,0	1/1:2,9:11:23.97:354,24,0	1/1:0,5:5:12.04:180,12,0
chr10	44736809	.	T	TCA	662.64	PASS	AB=0.866;AC=14;AF=0.333;AN=42;BaseQRankSum=-1.285;DP=283;FS=0.000;HRun=0;HaplotypeScore=155.2173;InbreedingCoeff=0.1637;MQ=37.24;MQ0=20;MQRankSum=-3.073;QD=5.06;ReadPosRankSum=0.039;VQSLOD=2.6661;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:7,4:9:0:0,0,0	0/0:6,0:6:1.67:0,2,11	0/0:21,0:2:1.25:0,1,3	0/0:13,0:2:1.29:0,1,4	1/1:11,4:13:3.14:22,3,0	0/0:13,0:13:4.26:0,4,39	./.	0/1:11,2:11:8.57:270,0,9	0/1:11,0:10:1.87:2,0,44	0/0:14,0:9:0.41:0,0,73	0/0:10,0:6:0.86:0,1,3	0/0:16,0:16:5.58:0,6,74	0/0:11,0:10:7.88:0,8,54	0/1:12,0:11:3.85:4,0,81	./.	./.	1/1:4,0:4:2.96:19,3,0	./.	./.	0/1:12,8:17:3.84:49,0,4	./.	0/0:14,0:13:7.28:0,7,44	0/0:6,0:6:2.83:0,3,36	0/0:4,0:4:1.82:0,2,5	1/1:16,0:12:2.03:6,2,0	1/1:8,5:11:19.97:267,20,0	0/1:13,2:14:12.27:137,0,12	./.
chr10	44737918	.	CT	C	2470.65	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=3.981;DP=544;FS=0.000;HRun=8;HaplotypeScore=67.7605;InbreedingCoeff=0.9918;MQ=66.22;MQ0=0;MQRankSum=0.108;QD=23.09;ReadPosRankSum=2.730;VQSLOD=4.2647;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:66.20:0,66,797	0/0:11,0:11:30.09:0,30,362	0/0:12,0:11:30.08:0,30,339	0/0:15,0:14:26.77:0,27,266	0/0:24,0:24:54.17:0,54,652	0/0:21,0:21:60.18:0,60,725	0/0:17,0:17:48.15:0,48,580	0/0:33,0:33:90.27:0,90,1077	0/0:21,0:21:63.19:0,63,761	1/1:3,29:32:87.12:835,87,0	1/1:0,18:18:51.08:491,51,0	0/0:18,0:18:54.17:0,54,652	0/0:5,0:5:12.04:0,12,145	0/0:11,0:11:30.08:0,30,352	1/1:2,12:14:30.04:290,30,0	1/1:1,11:12:33.05:319,33,0	0/0:19,1:20:22.20:0,22,551	1/1:0,17:17:42.07:406,42,0	0/0:22,0:22:63.08:0,63,718	0/0:30,0:30:78.18:0,78,914	0/0:26,0:26:69.21:0,69,833	0/0:25,0:25:75.20:0,75,890	0/0:25,0:25:60.18:0,60,725	0/0:13,0:13:33.10:0,33,389	1/1:3,11:14:33.05:319,33,0	0/0:20,1:21:28.20:0,28,623	0/0:33,0:33:87.23:0,87,1025	0/0:9,0:9:24.07:0,24,290
chr10	44738047	.	ATG	A	5431.08	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=7.231;DP=612;FS=1.241;HRun=0;HaplotypeScore=79.4581;InbreedingCoeff=0.9998;MQ=65.65;MQ0=2;MQRankSum=1.757;QD=48.06;ReadPosRankSum=3.271;VQSLOD=5.6977;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:57.20:0,57,1153	0/0:11,0:11:33.11:0,33,653	0/0:24,0:21:60.20:0,60,1152	0/0:16,0:12:36.11:0,36,639	0/0:31,0:31:90.31:0,90,1810	0/0:31,0:31:93.32:0,93,1890	0/0:17,0:17:51.17:0,51,1021	0/0:31,0:31:93.32:0,93,1890	0/0:29,0:29:87.28:0,87,1713	0/0:34,0:34:99:0,102,2035	0/0:27,0:27:81.28:0,81,1645	1/1:0,26:26:75.26:1224,75,0	1/1:0,13:13:39.13:636,39,0	1/1:0,19:19:54.18:880,54,0	0/0:21,0:20:63.22:0,63,1276	0/0:13,0:13:39.13:0,39,792	0/0:24,0:24:66.23:0,66,1340	0/0:23,0:23:66.23:0,66,1282	0/0:20,0:20:60.21:0,60,1195	0/0:27,0:27:81.28:0,81,1609	0/0:13,0:13:39.13:0,39,777	1/1:0,16:16:48.16:782,48,0	1/1:0,23:23:69.24:1126,69,0	1/1:0,16:16:48.16:783,48,0	0/0:15,0:15:45.15:0,45,878	0/0:21,0:21:63.22:0,63,1261	0/0:38,0:37:99:0,114,2296	0/0:10,0:10:30.10:0,30,575
chr10	44738201	.	CT	C	16668.37	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=14.198;DP=647;FS=1.898;HRun=2;HaplotypeScore=103.6500;InbreedingCoeff=0.9913;MQ=59.27;MQ0=2;MQRankSum=-5.716;QD=35.46;ReadPosRankSum=6.932;VQSLOD=4.3283;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,21:23:14.52:658,15,0	0/0:15,0:15:45.14:0,45,656	0/0:23,0:15:42.12:0,42,584	0/0:22,0:19:51.12:0,51,729	1/1:1,28:29:81.26:1050,81,0	0/0:23,0:23:69.23:0,69,1034	0/0:20,0:20:60.20:0,60,900	0/0:40,0:39:99:0,111,1646	0/0:20,0:20:60.19:0,60,877	1/1:1,25:26:78.25:1002,78,0	1/1:0,19:19:54.18:700,54,0	1/1:0,24:24:69.22:896,69,0	1/1:1,19:20:57.19:740,57,0	1/1:0,26:26:66.21:857,66,0	1/1:2,19:21:60.20:777,60,0	1/1:1,18:19:12.21:655,12,0	0/0:14,0:14:42.14:0,42,628	1/1:0,7:7:21.07:273,21,0	1/1:1,20:20:60.19:776,60,0	1/1:4,27:31:87.25:1096,87,0	1/1:4,21:25:60.18:758,60,0	1/1:1,32:33:81.26:1046,81,0	1/1:0,30:30:84.27:1091,84,0	1/1:0,19:19:57.19:740,57,0	1/1:2,22:24:66.21:856,66,0	1/1:3,34:37:99:1389,108,0	1/1:1,23:24:72.22:918,72,0	1/1:0,11:11:30.10:389,30,0
chr10	44738238	.	TG	T	9924.86	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=4.009;DP=636;FS=0.629;HRun=4;HaplotypeScore=128.8016;InbreedingCoeff=0.9888;MQ=63.32;MQ0=0;MQRankSum=-9.183;QD=30.08;ReadPosRankSum=1.032;VQSLOD=3.4197;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,22:23:54.17:647,54,0	0/0:13,0:13:33.11:0,33,462	0/0:30,0:29:79.37:0,79,1023	0/0:23,0:22:51.64:0,52,695	1/1:8,16:24:51.09:581,51,0	0/0:22,0:22:63.19:0,63,849	0/0:24,0:24:72.15:0,72,950	0/0:29,0:29:75.23:0,75,1021	0/0:22,0:22:60.20:0,60,839	1/1:4,36:40:99:1350,114,0	1/1:2,11:13:27.08:324,27,0	0/0:22,0:22:60.19:0,60,823	0/0:16,0:16:45.15:0,45,619	0/0:24,0:24:69.21:0,69,937	1/1:1,23:24:66.20:790,66,0	1/1:2,16:18:9.16:533,9,0	0/0:15,0:15:45.15:0,45,630	1/1:0,6:6:18.06:216,18,0	1/1:4,12:16:42.10:483,42,0	1/1:0,35:35:93.06:1060,93,0	1/1:5,26:31:63.06:718,63,0	0/0:22,0:22:60.19:0,60,822	0/0:22,0:22:60.08:0,60,823	0/0:21,0:21:57.18:0,57,796	1/1:2,22:24:57.17:682,57,0	1/1:1,44:45:99:1571,132,0	1/1:1,24:25:66.20:790,66,0	1/1:1,5:6:15.05:180,15,0
chr10	44739204	.	ATTTT	A	2251.38	PASS	AB=0.619;AC=19;AF=0.339;AN=56;BaseQRankSum=5.488;DP=404;FS=8.634;HRun=16;HaplotypeScore=88.0877;InbreedingCoeff=0.5725;MQ=53.70;MQ0=2;MQRankSum=-1.295;QD=13.09;ReadPosRankSum=5.358;VQSLOD=-0.0949;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:16:1.89:18,2,0	0/0:7,0:11:17.85:0,18,368	0/0:24,0:10:12.04:0,12,197	0/0:13,0:12:17.68:0,18,169	0/0:10,0:10:0.47:0,0,2	0/0:14,0:21:48.07:0,48,877	0/0:11,0:18:36.03:0,36,630	0/1:10,1:16:31.01:31,0,80	0/0:19,0:21:54.13:0,54,942	0/0:9,0:8:0:0,0,0	0/0:10,0:9:0:0,0,0	1/1:2,15:17:24.16:350,24,0	1/1:3,15:19:12.53:374,13,0	1/1:5,11:16:26.94:355,27,0	1/1:12,0:12:2.22:9,2,0	0/0:4,0:4:0:0,0,0	0/0:18,0:25:42.58:0,43,800	0/0:9,0:9:0:0,0,0	0/0:6,0:8:0.47:0,0,1	0/0:8,0:8:0:0,0,0	0/0:12,0:12:0:0,0,1	1/1:7,20:29:46.93:614,47,0	1/1:4,14:19:25.34:337,25,0	1/1:4,9:14:23.97:315,24,0	0/0:9,0:9:3:0,3,26	0/0:14,0:14:0.47:0,0,2	1/1:4,0:4:0.54:1,1,0	0/0:3,0:3:0:0,0,0
chr10	44740542	.	AT	A	1724.14	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=4.287;DP=612;FS=1.950;HRun=1;HaplotypeScore=70.0179;InbreedingCoeff=0.9951;MQ=56.57;MQ0=8;MQRankSum=2.287;QD=35.92;ReadPosRankSum=1.423;VQSLOD=4.0538;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:66.22:0,66,1054	1/1:0,12:12:33.11:461,33,0	0/0:36,0:18:50.64:0,51,742	0/0:26,0:11:30.10:0,30,480	0/0:22,0:22:63.21:0,63,1007	0/0:28,0:28:84.27:0,84,1316	0/0:25,0:25:75.26:0,75,1196	0/0:25,0:24:72.24:0,72,1130	0/0:23,0:23:69.24:0,69,1103	0/0:26,0:26:78.25:0,78,1223	0/0:18,0:18:54.18:0,54,861	0/0:12,0:12:36.11:0,36,552	0/0:17,0:17:51.16:0,51,791	0/0:23,0:23:69.22:0,69,1075	0/0:25,0:25:75.26:0,75,1197	0/0:15,0:15:45.14:0,45,696	1/1:0,36:36:99:1384,99,0	0/0:24,0:24:66.18:0,66,1018	0/0:19,0:18:54.18:0,54,864	0/0:33,0:32:93.32:0,93,1485	0/0:30,0:30:90.26:0,90,1411	0/0:15,0:15:45.13:0,45,694	0/0:16,0:16:48.16:0,48,767	0/0:10,0:10:30.10:0,30,480	0/0:14,0:14:42.14:0,42,672	0/0:31,0:31:93.32:0,93,1488	0/0:18,0:18:54.15:0,54,812	0/0:8,0:6:18.06:0,18,288
chr10	44740803	.	G	GT	4823.56	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-2.701;DP=372;FS=0.950;HRun=7;HaplotypeScore=52.2294;InbreedingCoeff=0.9463;MQ=67.92;MQ0=2;MQRankSum=0.773;QD=26.50;ReadPosRankSum=2.427;VQSLOD=5.4518;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,17:24:39.12:471,39,0	0/0:6,0:6:12.02:0,12,116	0/0:15,0:10:17.96:0,18,154	0/0:14,0:10:10.01:0,10,167	1/1:0,22:23:65.98:738,66,0	0/0:15,0:15:45.07:0,45,434	0/0:11,0:11:27.03:0,27,256	0/0:17,0:17:30.03:0,30,290	0/0:18,0:18:38.96:0,39,359	0/0:12,0:12:36.06:0,36,347	0/0:26,0:26:63.09:0,63,608	1/1:2,4:6:9.03:109,9,0	1/1:3,7:10:18.05:214,18,0	1/1:2,6:8:12.04:145,12,0	0/0:7,0:7:18.02:0,18,168	0/0:9,0:9:27.04:0,27,260	0/0:16,0:16:42.02:0,42,392	0/0:7,0:7:18.01:0,18,168	1/1:4,18:22:54.13:622,54,0	1/1:2,18:20:54.12:635,54,0	1/1:3,8:11:18.06:217,18,0	1/1:3,6:9:18.06:217,18,0	1/1:0,6:6:18.06:217,18,0	1/1:0,2:2:6.02:72,6,0	0/0:17,0:17:45.05:0,45,428	1/1:2,16:18:22.19:551,22,0	1/1:0,6:6:9.03:109,9,0	1/1:1,16:17:42.13:506,42,0
chr10	44742322	.	TC	T	4206.43	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=8.719;DP=696;FS=2.278;HRun=2;HaplotypeScore=65.9088;InbreedingCoeff=0.9531;MQ=54.82;MQ0=59;MQRankSum=3.376;QD=31.39;ReadPosRankSum=1.262;VQSLOD=3.4173;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:27:72.20:0,72,1052	0/0:15,0:15:45.15:0,45,673	0/0:28,0:5:11.07:0,11,140	0/0:30,0:1:3.01:0,3,45	0/0:36,0:36:99:0,105,1568	0/0:30,0:30:81.24:0,81,1171	0/0:15,0:14:36.12:0,36,538	0/0:34,0:17:39.13:0,39,585	0/0:18,0:18:54.18:0,54,806	0/0:40,0:37:99:0,108,1580	0/0:28,0:28:78.18:0,78,1168	1/1:1,7:7:15.05:195,15,0	1/1:2,17:18:51.64:662,52,0	1/1:1,24:24:60.20:779,60,0	0/0:22,0:21:60.20:0,60,896	0/0:25,0:25:72.24:0,72,1079	0/0:34,0:34:87.25:0,87,1271	0/0:29,0:28:75.25:0,75,1123	0/0:24,0:16:48.15:0,48,701	0/0:28,0:27:81.27:0,81,1203	0/0:24,0:23:66.22:0,66,988	1/1:1,32:32:90.29:1169,90,0	1/1:0,27:27:69.22:896,69,0	1/1:2,20:21:39.13:506,39,0	0/0:21,0:21:63.21:0,63,944	0/0:23,0:23:66.21:0,66,969	0/0:23,0:23:66.22:0,66,989	0/0:7,0:7:18.06:0,18,268
chr10	44742937	.	G	GT	5851.37	PASS	AB=1.000;AC=33;AF=0.589;AN=56;BaseQRankSum=14.879;DP=489;FS=6.626;HRun=2;HaplotypeScore=58.1071;InbreedingCoeff=0.8616;MQ=49.30;MQ0=1;MQRankSum=-10.589;QD=21.12;ReadPosRankSum=2.101;VQSLOD=4.6201;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,17:15:24.08:336,24,0	1/1:0,8:8:24.08:336,24,0	0/1:14,0:6:24.41:24,0,143	0/0:13,0:9:27.08:0,27,334	1/1:1,37:27:48.16:683,48,0	0/0:21,0:21:60.19:0,60,744	0/0:21,0:21:54.15:0,54,652	0/0:35,0:35:99:0,102,1254	0/0:14,0:14:39.12:0,39,483	1/1:2,25:23:57.18:800,57,0	1/1:2,14:13:8.94:103,9,0	0/0:7,0:7:18.06:0,18,223	0/0:17,0:17:51.13:0,51,616	0/0:21,0:21:60.19:0,60,744	1/1:1,15:16:24.08:345,24,0	1/1:1,3:3:3.01:43,3,0	1/1:1,12:11:21.03:279,21,0	1/1:1,10:10:18.06:259,18,0	1/1:1,6:5:12.04:173,12,0	1/1:0,27:24:39.09:537,39,0	1/1:4,3:7:3.01:43,3,0	0/0:27,0:27:78.24:0,78,966	0/0:24,0:24:63.20:0,63,781	0/0:12,0:12:33.10:0,33,409	1/1:1,19:15:27.09:388,27,0	1/1:0,21:19:51.17:727,51,0	1/1:1,20:18:30.10:431,30,0	1/1:0,10:8:24.08:345,24,0
chr10	44743451	.	TTGCTTCAAGGTTC	T	19011.29	PASS	AB=0.789;AC=27;AF=0.482;AN=56;BaseQRankSum=14.989;DP=526;FS=10.349;HRun=0;HaplotypeScore=178.6171;InbreedingCoeff=0.8696;MQ=40.16;MQ0=42;MQRankSum=-11.891;QD=75.14;ReadPosRankSum=4.470;VQSLOD=3.5230;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,15:15:18.06:723,18,0	0/0:10,0:8:21.06:0,21,1137	0/0:13,0:1:3.01:0,3,184	0/0:13,0:2:6.02:0,6,264	1/1:8,26:31:78.22:3055,78,0	0/0:16,0:14:36.12:0,36,2375	0/0:21,0:21:60.21:0,60,3779	0/0:27,0:16:48.13:0,48,2723	0/0:19,0:19:57.20:0,57,3540	1/1:3,18:20:54.19:2154,54,0	1/1:4,15:16:33.11:1319,33,0	0/0:17,0:16:41.95:0,42,2545	0/0:20,0:19:30.10:0,30,2005	0/0:20,0:20:45.15:0,45,2879	1/1:0,13:11:33.11:1322,33,0	1/1:4,12:12:24.08:982,24,0	0/0:25,0:22:21.07:0,21,1376	0/1:11,4:14:99:473,0,176	1/1:4,6:8:15.03:411,15,0	1/1:5,22:26:60.16:2337,60,0	1/1:2,6:4:6.02:221,6,0	0/0:23,0:23:48.16:0,48,3016	0/0:31,0:31:62.78:0,63,3935	0/0:18,0:18:21.07:0,21,1351	1/1:1,12:13:36.12:1473,36,0	1/1:2,20:20:54.19:2210,54,0	1/1:5,16:18:39.13:1595,39,0	1/1:5,6:9:18.06:736,18,0
chr10	44745517	.	C	CT	15046.73	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-1.644;DP=528;FS=2.052;HRun=2;HaplotypeScore=104.5743;InbreedingCoeff=0.7724;MQ=49.91;MQ0=2;MQRankSum=-0.592;QD=29.33;ReadPosRankSum=2.341;VQSLOD=4.6620;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,16:19:42.10:581,42,0	1/1:0,9:9:5.76:86,6,0	0/0:5,2:5:5.95:0,6,55	0/0:8,0:3:6.01:0,6,67	1/1:2,40:42:78.26:1122,78,0	1/1:2,18:20:42.14:604,42,0	1/1:1,9:10:12.04:173,12,0	1/1:3,24:22:60.10:768,60,0	1/1:0,24:24:57.19:821,57,0	1/1:2,23:23:63.21:907,63,0	1/1:2,31:33:75.21:1055,75,0	1/1:0,12:12:27.09:389,27,0	1/1:0,17:17:45.15:648,45,0	1/1:1,13:14:18.06:259,18,0	1/1:1,22:23:45.15:648,45,0	1/1:0,13:13:21.07:302,21,0	1/1:2,17:19:45.15:647,45,0	1/1:3,14:17:39.13:556,39,0	1/1:0,7:6:15.05:216,15,0	1/1:0,38:35:78.22:1099,78,0	1/1:1,14:15:39.13:562,39,0	1/1:2,19:20:18.06:259,18,0	1/1:1,23:23:45.15:641,45,0	1/1:0,6:6:9.03:130,9,0	1/1:0,17:17:33.11:475,33,0	1/1:0,27:26:72.22:1018,72,0	1/1:3,18:20:45.15:648,45,0	1/1:0,12:12:30.10:432,30,0
chr10	44747288	.	C	CTGTAT	23522.31	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=-0.965;DP=538;FS=0.328;HRun=0;HaplotypeScore=112.6261;InbreedingCoeff=0.9724;MQ=74.25;MQ0=0;MQRankSum=-16.801;QD=75.88;ReadPosRankSum=1.528;VQSLOD=6.7321;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,8:13:24.08:757,24,0	1/1:2,7:10:27.09:795,27,0	0/0:19,0:20:60:0,60,1000	0/0:17,0:17:48.16:0,48,921	1/1:2,31:36:99:3032,99,0	0/0:31,0:31:90.28:0,90,1858	0/0:13,0:13:39.12:0,39,789	0/0:26,0:26:72.23:0,72,1464	0/0:20,0:20:60.20:0,60,1262	1/1:5,18:25:75.23:2201,75,0	1/1:6,25:30:81.28:2434,81,0	0/0:10,0:10:27.09:0,27,586	0/0:14,0:14:42.14:0,42,895	0/0:17,0:17:51.16:0,51,1052	1/1:9,12:21:54.19:1617,54,0	1/1:3,11:16:45.15:1408,45,0	1/1:4,7:12:27.09:849,27,0	1/1:2,9:11:26.96:774,27,0	1/1:5,18:23:63.22:1950,63,0	1/1:8,25:34:84.29:2474,84,0	1/1:1,6:8:15.01:399,15,0	0/0:24,0:24:69.24:0,69,1478	0/0:28,0:28:81.28:0,81,1741	0/0:8,0:8:24.08:0,24,521	1/1:4,11:15:33.11:1040,33,0	1/1:5,10:17:45.14:1194,45,0	1/1:10,25:35:84.29:2575,84,0	1/1:2,0:2:3:25,3,0
chr10	44747765	.	T	TAC	398.91	PASS	AB=1.000;AC=20;AF=0.400;AN=50;BaseQRankSum=0.943;DP=518;FS=3.811;HRun=0;HaplotypeScore=105.1012;InbreedingCoeff=0.4921;MQ=58.53;MQ0=12;MQRankSum=-0.836;QD=1.88;ReadPosRankSum=0.391;VQSLOD=2.1242;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:31:8.82:0,9,73	0/0:11,0:13:5.68:0,6,28	./.	./.	0/0:17,0:17:8.85:0,9,77	0/0:11,0:11:2.96:0,3,19	0/0:18,0:22:6.01:0,6,63	1/1:25,0:24:5.93:40,6,0	0/1:17,0:19:1.40:1,0,124	0/0:18,0:17:6.01:0,6,60	0/0:15,0:15:10.87:0,11,75	1/1:13,0:12:8.93:71,9,0	1/1:20,0:19:5.96:51,6,0	1/1:16,0:15:5.98:47,6,0	0/0:9,0:9:2.98:0,3,23	1/1:11,8:20:9.03:132,9,0	0/1:18,0:20:7.02:7,0,22	0/0:15,0:15:8.78:0,9,86	0/0:8,0:8:2.84:0,3,14	0/0:30,0:30:2.84:0,3,14	0/0:31,0:29:2.74:0,3,12	1/1:20,0:19:3.01:30,3,0	1/1:13,0:13:5.96:44,6,0	1/1:25,0:25:14.74:130,15,0	0/0:10,0:10:8.44:0,8,56	1/1:20,0:20:0.05:0,0,0	0/0:7,0:15:7.77:0,8,34	./.
chr10	44747813	.	C	CAT	1309	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=5.664;DP=548;FS=3.928;HRun=0;HaplotypeScore=91.9483;InbreedingCoeff=0.8602;MQ=71.75;MQ0=8;MQRankSum=-2.819;QD=7.35;ReadPosRankSum=0.699;VQSLOD=3.3075;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:59.89:0,60,498	1/1:13,0:13:27.08:206,27,0	0/0:34,0:24:65.94:0,66,639	0/0:27,0:23:49.35:0,49,502	0/0:24,0:24:68.77:0,69,577	0/0:16,0:16:35.88:0,36,303	0/0:15,0:15:23.88:0,24,222	0/0:28,0:28:65.53:0,66,581	0/0:21,0:20:47.95:0,48,469	0/0:21,0:20:53.74:0,54,484	0/0:13,0:12:32.50:0,32,282	1/1:4,0:16:11.52:105,12,0	1/1:15,0:14:23.05:167,23,0	1/1:18,0:18:32.61:255,33,0	0/0:12,0:12:32.96:0,33,289	0/1:20,0:20:38.46:38,0,166	1/1:24,0:23:49.44:339,49,0	0/0:15,0:15:40.63:0,41,324	0/0:13,0:13:32.92:0,33,288	0/0:19,0:19:44.27:0,44,351	0/0:26,0:25:56.84:0,57,457	1/1:7,18:26:5.96:73,6,0	1/1:17,0:17:29.95:262,30,0	1/1:6,17:27:7.27:63,7,0	0/0:16,0:16:41.12:0,41,342	0/0:15,0:14:35.63:0,36,329	0/0:25,0:25:59.56:0,60,468	0/0:2,0:2:5.96:0,6,45
chr10	44748181	.	T	TC	4115.22	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=5.731;DP=510;FS=0.000;HRun=1;HaplotypeScore=123.3983;InbreedingCoeff=0.8689;MQ=70.18;MQ0=0;MQRankSum=-0.496;QD=39.57;ReadPosRankSum=1.613;VQSLOD=3.2700;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:90.28:0,90,1126	0/0:10,0:10:30.10:0,30,418	0/0:14,0:14:39.01:0,39,479	0/1:6,0:6:16.27:16,0,71	0/0:31,0:31:85.52:0,86,1099	0/0:20,0:20:60.20:0,60,839	0/0:12,0:12:36.12:0,36,504	0/0:24,0:24:66.21:0,66,909	0/0:25,0:25:75.22:0,75,1014	0/0:23,0:23:69.17:0,69,855	0/0:29,0:29:87.27:0,87,1126	1/1:1,11:12:30.10:473,30,0	1/1:1,14:15:42.14:663,42,0	1/1:0,14:14:39.13:619,39,0	0/0:16,0:16:48.13:0,48,591	0/0:14,0:14:36.97:0,37,445	0/0:14,0:14:42.10:0,42,550	0/0:16,0:16:42.03:0,42,488	0/0:24,0:23:69.20:0,69,872	0/0:26,0:26:72.23:0,72,932	0/0:13,0:13:36.12:0,36,464	1/1:0,25:25:71.91:1059,72,0	1/1:0,22:22:63.21:1000,63,0	1/1:0,10:10:18.06:286,18,0	0/0:20,0:20:58.07:0,58,729	0/0:18,0:18:54.14:0,54,678	0/0:24,0:24:72.17:0,72,875	0/0:1,0:1:3.01:0,3,38
chr10	44748190	.	G	GT	8127.92	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=-0.839;DP=507;FS=3.638;HRun=8;HaplotypeScore=104.1429;InbreedingCoeff=0.9082;MQ=79.15;MQ0=0;MQRankSum=-0.365;QD=27.27;ReadPosRankSum=2.218;VQSLOD=4.6726;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,25:31:72.21:831,72,0	0/0:11,0:11:27.01:0,27,247	0/1:15,0:15:6.71:7,0,190	0/0:10,0:10:10.51:0,11,104	1/1:1,30:31:75.18:851,75,0	0/0:20,0:20:57.02:0,57,522	0/0:14,0:14:16.31:0,16,302	0/0:21,0:21:51.01:0,51,463	0/0:23,0:23:60.02:0,60,546	1/1:4,17:22:54.14:611,54,0	1/1:2,24:26:69.16:782,69,0	0/0:13,0:13:39.02:0,39,357	0/0:14,0:14:33.01:0,33,302	0/0:14,0:14:33.01:0,33,302	1/1:0,17:17:48.14:554,48,0	1/1:3,11:14:30.09:346,30,0	0/0:12,0:12:30.01:0,30,275	1/1:1,14:15:36.11:415,36,0	1/1:3,20:22:60.16:681,60,0	1/1:3,23:26:69.07:751,69,0	1/1:3,9:12:27.08:312,27,0	0/0:25,0:25:66.02:0,66,600	0/0:23,0:23:56.92:0,57,522	0/0:9,0:9:18.01:0,18,165	1/1:2,19:22:53.99:603,54,0	1/1:2,17:19:51.15:589,51,0	1/1:1,23:24:66.20:762,66,0	1/1:0,1:1:3.01:35,3,0
chr10	44748578	.	TA	T	6935.99	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=10.422;DP=672;FS=6.841;HRun=6;HaplotypeScore=68.9863;InbreedingCoeff=0.9998;MQ=88.50;MQ0=0;MQRankSum=-0.021;QD=29.64;ReadPosRankSum=3.590;VQSLOD=5.5584;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,42:45:99:1193,111,0	0/0:14,0:14:42.13:0,42,539	0/0:28,0:28:72.18:0,72,871	0/0:22,0:22:44.28:0,44,583	1/1:2,29:31:84.17:890,84,0	0/0:28,0:28:78.12:0,78,1009	0/0:20,0:20:51.15:0,51,655	0/0:20,0:20:51.15:0,51,636	0/0:28,0:28:78.24:0,78,1013	0/0:32,0:32:87.25:0,87,1101	0/0:22,0:22:66.21:0,66,867	0/0:13,0:13:36.12:0,36,474	0/0:19,0:19:48.11:0,48,611	0/0:30,0:30:87.16:0,87,1072	0/0:27,0:27:72.21:0,72,918	0/0:20,0:20:57.17:0,57,734	0/0:21,0:21:60.19:0,60,779	0/0:11,0:11:27.09:0,27,355	1/1:0,25:25:75.16:794,75,0	1/1:0,32:32:96.20:1019,96,0	1/1:0,19:19:51.13:548,51,0	0/0:21,0:21:54.12:0,54,710	0/0:24,0:24:69.22:0,69,904	0/0:19,0:19:48.16:0,48,632	0/0:19,0:19:57.16:0,57,733	1/1:2,25:27:38.69:751,39,0	1/1:0,39:39:99:1225,114,0	1/1:0,16:16:48.12:516,48,0
chr10	44749961	.	AG	A	785.09	PASS	AC=4;AF=0.091;AN=44;BaseQRankSum=6.486;DP=493;FS=0.762;HRun=4;HaplotypeScore=63.2725;InbreedingCoeff=0.9892;MQ=73.56;MQ0=0;MQRankSum=0.184;QD=27.07;ReadPosRankSum=0.677;VQSLOD=2.6901;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,129,1770	1/1:0,6:6:15.05:180,15,0	0/0:21,0:20:51.12:0,51,665	0/0:28,0:27:68.04:0,68,924	0/0:22,0:22:60.14:0,60,797	0/0:39,0:39:99:0,108,1507	0/0:27,0:27:81.27:0,81,1130	0/0:28,0:28:84.27:0,84,1156	0/0:19,0:19:51.17:0,51,700	0/0:19,0:19:57.13:0,57,753	0/0:17,0:17:48.16:0,48,658	./.	./.	./.	0/0:22,0:22:66.22:0,66,922	0/0:15,0:15:39.13:0,39,546	1/1:1,22:23:60.18:720,60,0	0/0:7,0:7:21.07:0,21,292	0/0:26,0:26:78.21:0,78,1055	0/0:24,0:24:72.22:0,72,974	0/0:24,0:24:66.22:0,66,924	./.	./.	./.	0/0:20,0:20:54.18:0,54,755	0/0:22,0:22:63.20:0,63,863	0/0:30,0:30:81.23:0,81,1109	0/0:10,0:10:30.10:0,30,420
chr10	44750929	.	C	CAAGG	570.63	PASS	AB=0.845;AC=6;AF=0.107;AN=56;BaseQRankSum=4.797;DP=325;FS=27.727;HRun=0;HaplotypeScore=55.0661;InbreedingCoeff=-0.1351;MQ=43.23;MQ0=28;MQRankSum=-5.265;QD=7.32;ReadPosRankSum=2.190;VQSLOD=0.2737;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:18,1:18:36.12:0,36,715	0/0:7,1:7:15.05:0,15,299	0/0:19,0:3:9.03:0,9,168	0/0:21,0:7:21.07:0,21,415	0/0:11,1:12:26.31:0,26,511	0/1:9,3:11:99:202,0,384	0/0:9,0:9:24.08:0,24,459	0/0:13,0:10:24.08:0,24,479	0/0:11,0:10:30.10:0,30,599	0/1:11,3:11:99:205,0,419	0/0:12,1:13:29.97:0,30,566	0/0:11,0:11:20.93:0,21,379	0/0:6,0:6:12.04:0,12,239	0/0:10,0:9:21.07:0,21,419	0/0:14,0:11:24.08:0,24,468	0/0:7,0:7:18.06:0,18,359	0/0:10,0:10:27.09:0,27,501	0/0:10,0:9:24.08:0,24,479	0/0:10,0:8:24.08:0,24,479	0/1:11,1:11:60.93:61,0,338	0/0:13,0:13:30.10:0,30,599	0/0:3,0:2:3.01:0,3,60	0/0:5,1:5:12.04:0,12,239	0/0:10,0:10:24.07:0,24,440	0/0:11,1:9:24.08:0,24,479	0/1:20,2:21:89.13:89,0,1016	0/1:10,2:9:79.73:80,0,278	0/1:4,2:5:58.28:58,0,225
chr10	44752239	.	CT	C	1966.80	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=11.624;DP=540;FS=0.485;HRun=5;HaplotypeScore=108.3162;InbreedingCoeff=0.9698;MQ=66.91;MQ0=0;MQRankSum=-4.468;QD=24.59;ReadPosRankSum=1.078;VQSLOD=2.1422;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:69.23:0,69,944	0/0:11,0:11:30.10:0,30,410	0/0:8,0:8:7.55:0,8,102	0/0:8,0:8:11.75:0,12,94	0/0:30,0:30:84.27:0,84,1129	0/0:25,0:25:75.24:0,75,1011	0/0:13,0:13:36.12:0,36,492	0/0:25,0:25:63.20:0,63,847	0/0:29,0:29:81.27:0,81,1104	0/0:39,0:39:99:0,108,1447	0/0:22,0:22:60.19:0,60,800	1/1:1,9:10:30.07:325,30,0	1/1:1,13:14:39.11:442,39,0	1/1:1,13:14:36.10:408,36,0	0/0:16,0:16:48.16:0,48,657	0/0:7,0:7:21.07:0,21,287	0/0:23,0:23:63.19:0,63,822	0/0:11,0:11:33.11:0,33,448	0/0:25,0:25:69.18:0,69,894	0/0:35,0:35:99:0,102,1348	0/0:14,0:14:39.13:0,39,533	1/1:0,12:10:30.09:340,30,0	1/1:4,19:19:48.09:520,48,0	1/1:2,5:7:11.71:118,12,0	0/0:24,0:24:72.16:0,72,914	0/0:25,0:25:69.22:0,69,927	0/0:30,0:30:87.20:0,87,1146	0/0:15,0:15:45.15:0,45,616
chr10	44752279	.	A	AAAT	4497.72	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=8.090;DP=563;FS=7.340;HRun=0;HaplotypeScore=108.4508;InbreedingCoeff=0.9897;MQ=80.59;MQ0=0;MQRankSum=-8.527;QD=55.53;ReadPosRankSum=0.945;VQSLOD=6.3977;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:84.29:0,84,1554	0/0:5,0:5:15.05:0,15,280	0/0:24,0:24:70.46:0,70,1189	0/0:13,0:13:39.13:0,39,708	0/0:27,0:27:66.21:0,66,1190	0/0:24,0:24:72.23:0,72,1311	0/0:15,0:15:45.15:0,45,831	0/0:32,0:32:96.33:0,96,1789	0/0:28,0:28:84.29:0,84,1552	0/0:34,0:34:99:0,99,1739	0/0:21,0:21:63.22:0,63,1168	1/1:0,13:14:39.13:957,39,0	1/1:0,14:14:42.14:1034,42,0	1/1:1,20:21:57.20:1364,57,0	0/0:25,0:25:75.26:0,75,1392	0/0:13,0:13:39.13:0,39,727	0/0:25,0:25:75.23:0,75,1325	0/0:17,0:17:51.16:0,51,920	0/0:20,0:20:60.19:0,60,1038	0/0:29,0:29:87.30:0,87,1604	0/0:17,0:17:51.17:0,51,943	1/1:0,6:6:15.05:369,15,0	1/1:0,16:12:23.99:442,24,0	1/1:1,8:9:15.05:331,15,0	0/0:22,0:22:66.23:0,66,1230	0/0:21,0:21:63.20:0,63,1143	0/0:33,0:33:99:0,99,1814	0/0:9,0:9:27.09:0,27,503
chr10	44754762	.	T	TTATGTATG	10233.76	PASS	AB=0.669;AC=31;AF=0.554;AN=56;BaseQRankSum=2.365;DP=764;FS=5.520;HRun=0;HaplotypeScore=199.6129;InbreedingCoeff=0.6870;MQ=62.00;MQ0=7;MQRankSum=-6.026;QD=20.35;ReadPosRankSum=-2.076;VQSLOD=3.7709;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:18,13:36:11.39:322,11,0	1/1:8,13:21:21.06:786,21,0	0/0:29,0:22:3.01:0,3,35	0/0:18,0:14:3.01:0,3,34	1/1:12,21:37:32.85:1105,33,0	0/0:21,0:22:17.59:0,18,769	0/0:18,0:19:5.78:0,6,548	1/1:46,0:44:33.10:401,33,0	0/0:22,0:22:51.16:0,51,1052	0/0:34,0:33:45.14:0,45,961	0/0:32,0:33:49.98:0,50,1106	1/1:8,0:19:35.91:291,36,0	1/1:3,0:18:35.92:293,36,0	1/1:9,0:27:32.94:273,33,0	0/0:16,0:16:30.10:0,30,669	0/0:22,0:22:39.12:0,39,800	1/1:15,8:24:12.04:381,12,0	0/0:14,0:14:9.48:0,9,235	1/1:17,3:21:15:236,15,0	1/1:9,21:32:36.11:1234,36,0	1/1:21,0:21:10.17:342,10,0	1/1:12,0:39:62.93:562,63,0	0/1:17,0:33:42.33:178,0,42	1/1:5,0:20:11.58:84,12,0	0/0:31,0:32:54.10:0,54,1053	0/1:16,13:31:20.57:1393,0,21	1/1:20,19:42:39.08:1392,39,0	0/1:16,15:32:44.89:962,0,45
chr10	44755171	.	AAATTCTCAGTATTTT	A	973.21	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=4.543;DP=490;FS=2.755;HRun=0;HaplotypeScore=190.1767;InbreedingCoeff=0.8779;MQ=66.43;MQ0=0;MQRankSum=-4.702;QD=36.04;ReadPosRankSum=-0.447;VQSLOD=2.9627;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:87.30:0,87,6181	1/1:5,6:11:12.04:511,12,0	0/0:9,0:9:15.04:0,15,547	0/0:8,0:7:3.01:0,3,219	0/0:32,0:32:81.28:0,81,5190	0/0:16,0:16:33.11:0,33,2292	0/0:13,0:13:33.11:0,33,2316	0/0:30,0:30:64.46:0,64,3878	0/0:12,0:12:33.11:0,33,2069	0/0:23,0:23:60.21:0,60,4024	0/0:26,0:26:72.25:0,72,4851	0/0:6,0:6:15.05:0,15,1012	0/0:17,0:17:51.18:0,51,3517	0/0:15,0:15:39.13:0,39,2826	0/0:17,0:17:42.14:0,42,2881	0/0:18,0:18:51.18:0,51,3619	1/1:8,8:16:17.77:576,18,0	0/0:6,0:6:18.06:0,18,1289	0/0:26,0:26:75.26:0,75,4085	0/0:18,0:18:45.15:0,45,2986	0/0:15,0:15:34.73:0,35,2199	0/0:14,0:14:30.10:0,30,1819	0/0:18,0:18:33.11:0,33,2210	0/0:13,0:13:36.08:0,36,2178	0/0:19,0:18:45.15:0,45,2902	0/0:15,0:15:42.14:0,42,2814	0/0:30,0:30:84.26:0,84,5108	0/0:13,0:13:39.13:0,39,2474
chr10	44755796	.	TTATATATA	T	8608.05	PASS	AB=0.739;AC=39;AF=0.696;AN=56;BaseQRankSum=2.367;DP=345;FS=0.000;HRun=0;HaplotypeScore=121.7835;InbreedingCoeff=0.4658;MQ=63.70;MQ0=3;MQRankSum=-5.982;QD=31.30;ReadPosRankSum=5.034;VQSLOD=3.8126;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,16:19:24.08:511,24,0	1/1:7,0:7:15.05:284,15,0	0/0:9,0:8:3.01:0,3,42	0/0:16,0:8:6.45:0,6,78	1/1:0,19:19:57.11:1112,57,0	0/0:8,0:8:21.07:0,21,813	0/0:3,0:3:3.01:0,3,128	0/0:8,0:29:56.46:0,56,515	0/0:5,0:5:12.01:0,12,306	1/1:3,0:14:6.39:91,6,0	0/1:2,0:11:7.97:8,0,101	0/1:9,0:9:2.16:297,0,2	1/1:11,0:11:11.91:418,12,0	1/1:11,0:11:22.32:360,22,0	0/1:2,0:6:19.24:19,0,27	0/1:1,0:6:0.81:35,0,1	1/1:11,0:11:20.98:301,21,0	1/1:1,0:6:2.88:15,3,0	1/1:4,17:20:48.10:1032,48,0	1/1:1,13:14:39.13:875,39,0	1/1:3,6:9:3.90:42,4,0	0/1:9,0:9:22.11:193,0,22	1/1:14,0:14:9.51:361,10,0	1/1:6,0:6:5.64:106,6,0	1/1:2,0:17:26.84:174,27,0	1/1:5,21:26:63.13:1417,63,0	1/1:0,20:20:30.10:761,30,0	1/1:1,7:8:9.03:196,9,0
chr10	44755806	.	ATATATATATT	A	5354.18	PASS	AB=1.000;AC=25;AF=0.446;AN=56;BaseQRankSum=6.470;DP=328;FS=0.000;HRun=0;HaplotypeScore=135.6507;InbreedingCoeff=0.3372;MQ=60.96;MQ0=3;MQRankSum=-6.214;QD=24.90;ReadPosRankSum=6.728;VQSLOD=3.4540;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:18,0:17:39.22:76,0,39	1/1:6,0:6:17.98:384,18,0	0/0:7,0:6:6.01:0,6,59	0/0:17,0:7:3.48:0,3,42	0/1:20,0:20:58.89:176,0,59	0/0:7,0:7:21.07:0,21,1019	0/0:2,0:2:6.02:0,6,231	0/0:24,0:24:66.13:0,66,1154	0/0:4,0:4:9.02:0,9,343	0/0:12,0:12:1.29:0,1,112	0/1:9,0:9:16.28:16,0,173	1/1:1,8:9:18.06:592,18,0	1/1:1,13:14:27.09:847,27,0	1/1:0,10:10:24.08:716,24,0	0/0:7,0:7:14.63:0,15,196	0/0:5,0:5:11.40:0,11,80	1/1:8,0:8:13.49:340,13,0	0/0:5,0:5:2.80:0,3,13	0/1:21,0:20:99:195,0,156	0/1:15,0:15:99:151,0,124	0/0:7,0:7:5.81:0,6,34	1/1:2,8:10:11.11:392,11,0	1/1:1,14:15:29.56:775,30,0	1/1:2,6:8:5.96:197,6,0	0/0:16,0:16:39.51:0,40,233	0/1:23,0:23:59.61:278,0,60	1/1:20,0:19:15.85:190,16,0	0/1:9,0:9:30.02:30,0,59
chr10	44755807	.	TATATATATTTA	T	3103.94	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=10.382;DP=329;FS=5.265;HRun=0;HaplotypeScore=148.4832;InbreedingCoeff=0.2649;MQ=60.82;MQ0=3;MQRankSum=-5.618;QD=14.99;ReadPosRankSum=6.602;VQSLOD=1.4995;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:18,0:17:31.99:32,0,79	1/1:1,5:6:15.52:452,16,0	0/0:6,0:5:6.02:0,6,90	0/0:17,0:7:9.70:0,10,71	0/1:20,0:20:81.57:120,0,82	0/0:7,0:7:21.07:0,21,1150	0/0:2,0:2:6.02:0,6,269	0/0:24,0:24:72.25:0,72,1672	0/0:5,0:5:15.04:0,15,495	0/0:12,0:12:28.52:0,29,369	0/0:9,0:9:14.52:0,15,322	0/1:9,0:9:2.18:291,0,2	1/1:14,0:14:11.84:410,12,0	1/1:10,0:10:23.11:358,23,0	0/0:7,0:7:18.04:0,18,319	0/0:5,0:5:12.03:0,12,159	1/1:3,5:8:23.66:481,24,0	0/0:5,0:5:3.01:0,3,33	0/1:22,0:21:99:135,0,300	0/1:15,0:15:68.40:68,0,159	0/0:7,0:7:1.17:0,1,47	0/1:10,0:10:21.66:190,0,22	0/1:15,0:15:3.56:343,0,4	1/1:8,0:8:5.99:104,6,0	0/0:16,0:16:42.05:0,42,480	0/1:23,0:23:57.26:182,0,57	1/1:20,0:19:25.95:112,26,0	0/1:9,0:9:9.52:10,0,151
chr10	44755852	.	GT	G	553.41	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=2.893;DP=426;FS=2.188;HRun=1;HaplotypeScore=96.7669;InbreedingCoeff=0.9626;MQ=65.24;MQ0=0;MQRankSum=-1.879;QD=32.55;ReadPosRankSum=2.382;VQSLOD=3.5491;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:39.13:0,39,622	1/1:0,4:4:12.04:167,12,0	0/0:13,0:13:36.08:0,36,507	0/0:13,0:12:36.12:0,36,569	0/0:24,0:24:72.16:0,72,1116	0/0:10,0:10:30.10:0,30,479	0/0:11,0:11:33.11:0,33,528	0/0:36,0:36:99:0,105,1644	0/0:8,0:8:24.08:0,24,384	0/0:27,0:27:81.28:0,81,1293	0/0:7,0:7:21.07:0,21,335	0/0:12,0:12:30.10:0,30,479	0/0:15,0:15:27.09:0,27,430	0/0:12,0:12:30.05:0,30,448	0/0:11,0:11:33.09:0,33,481	0/0:6,0:6:18.06:0,18,287	1/1:0,13:13:36.11:503,36,0	0/0:8,0:8:21.07:0,21,335	0/0:24,0:24:72.18:0,72,1095	0/0:31,0:31:87.27:0,87,1337	0/0:11,0:11:30.10:0,30,477	0/0:13,0:13:35.81:0,36,574	0/0:19,0:19:51.09:0,51,758	0/0:9,0:9:15.05:0,15,228	0/0:19,0:19:45.13:0,45,693	0/0:17,0:17:51.17:0,51,814	0/0:24,0:24:60.19:0,60,935	0/0:9,0:9:21.07:0,21,335
chr10	44757112	.	GC	G	889.27	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=6.275;DP=584;FS=21.250;HRun=1;HaplotypeScore=65.2923;InbreedingCoeff=0.9247;MQ=40.73;MQ0=78;MQRankSum=-5.381;QD=17.44;ReadPosRankSum=0.267;VQSLOD=2.4599;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:30:41.81:0,42,649	0/0:12,0:12:33.07:0,33,497	0/0:15,0:11:30.10:0,30,459	0/0:20,0:17:51.17:0,51,814	0/0:19,0:16:18.06:0,18,278	0/0:17,0:16:39.12:0,39,598	0/0:27,0:22:54.13:0,54,793	0/0:39,0:3:9.03:0,9,144	0/0:26,0:26:48.15:0,48,743	0/0:38,0:32:93.26:0,93,1426	0/0:27,0:22:57.18:0,57,863	1/1:4,5:5:12.04:167,12,0	1/1:1,6:4:8.93:81,9,0	1/1:0,7:4:12.04:167,12,0	0/0:25,0:23:60.20:0,60,934	0/0:29,0:26:66.17:0,66,1001	0/0:16,0:12:27.05:0,27,394	0/0:31,0:27:66.14:0,66,998	0/0:27,0:10:24.08:0,24,384	0/0:22,0:14:27.04:0,27,401	0/0:38,0:21:30.10:0,30,478	1/1:0,14:11:33.11:459,33,0	1/1:0,6:3:6.02:83,6,0	1/1:2,6:7:8.99:104,9,0	0/0:16,0:16:42.11:0,42,644	0/0:25,0:14:42.14:0,42,671	0/0:15,0:12:24.08:0,24,383	0/0:8,0:7:21.07:0,21,332
chr10	44757416	.	A	AG	2058.45	PASS	AC=20;AF=0.455;AN=44;BaseQRankSum=-0.755;DP=301;FS=0.580;HRun=1;HaplotypeScore=38.6876;InbreedingCoeff=0.9149;MQ=45.86;MQ0=6;MQRankSum=-2.810;QD=25.41;ReadPosRankSum=1.245;VQSLOD=3.4668;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,10:9:12.04:179,12,0	1/1:0,4:4:12.04:179,12,0	0/0:17,0:13:35.95:0,36,372	0/0:19,0:14:41.97:0,42,501	1/1:1,10:7:18.06:269,18,0	0/0:13,0:13:27.02:0,27,329	0/0:17,0:16:42.09:0,42,525	0/0:20,0:18:51.17:0,51,662	0/0:17,0:17:24.01:0,24,280	0/0:26,0:26:75.24:0,75,972	0/0:22,0:21:54:0,54,630	./.	./.	./.	0/0:17,0:17:39.13:0,39,505	0/0:9,0:9:21.03:0,21,253	./.	0/0:31,0:30:72.23:0,72,933	1/1:1,2:2:6.02:90,6,0	1/1:1,13:10:27.09:403,27,0	1/1:0,2:2:5.95:63,6,0	1/1:0,1:1:2.92:17,3,0	./.	./.	0/0:10,0:10:27:0,27,302	1/1:1,10:11:30.05:371,30,0	1/1:0,16:12:30.10:448,30,0	1/1:4,5:7:15.05:225,15,0
chr10	44757900	.	GA	G	1784.60	PASS	AB=0.773;AC=27;AF=0.900;AN=30;BaseQRankSum=-2.692;DP=127;FS=26.457;HRun=2;HaplotypeScore=16.1314;InbreedingCoeff=0.2242;MQ=65.98;MQ0=11;MQRankSum=-2.989;QD=18.40;ReadPosRankSum=2.758;VQSLOD=1.8244;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	1/1:0,1:1:3.01:39,3,0	0/1:11,5:5:53.57:54,0,68	0/0:5,10:2:6.02:0,6,67	1/1:0,9:8:18.06:233,18,0	1/1:0,7:7:15.05:195,15,0	./.	./.	1/1:0,6:5:9.03:117,9,0	1/1:1,5:5:12.04:156,12,0	1/1:0,10:8:18.06:233,18,0	./.	./.	./.	1/1:0,12:6:12.04:156,12,0	1/1:0,2:1:3.01:39,3,0	./.	1/1:0,9:6:18.06:234,18,0	./.	./.	./.	./.	./.	./.	1/1:1,10:8:21.07:272,21,0	1/1:0,3:2:6.02:78,6,0	1/1:0,3:3:3.01:39,3,0	1/1:0,1:1:3.01:39,3,0
chr10	44758588	.	T	TAAAG	93.78	PASS	AC=6;AF=0.60;AN=10;BaseQRankSum=1.231;DP=164;FS=3.979;HRun=0;HaplotypeScore=9.5011;MQ=6.92;MQ0=132;MQRankSum=-0.358;QD=4.69;ReadPosRankSum=-0.358;VQSLOD=0.5798;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:1:2.97:0,3,20	./.	./.	./.	1/1:9,1:1:2.92:17,3,0	./.	./.	./.	1/1:1,2:1:3.01:73,3,0	./.	./.	./.	./.	./.	./.	./.	0/0:10,0:1:3:0,3,28	./.	./.	./.	./.	./.	./.	./.	./.	./.	1/1:5,2:1:3.01:78,3,0	./.
chr10	44760196	.	TA	T	1571.01	PASS	AB=0.700;AC=25;AF=0.625;AN=40;BaseQRankSum=7.032;DP=348;FS=5.243;HRun=9;HaplotypeScore=25.2840;InbreedingCoeff=0.7044;MQ=32.33;MQ0=60;MQRankSum=-7.622;QD=8.68;ReadPosRankSum=0.786;VQSLOD=0.2033;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,4:2:3:27,3,0	1/1:0,6:4:3:27,3,0	0/0:22,0:4:11.97:0,12,111	0/0:24,0:5:12.01:0,12,126	1/1:5,15:17:12:108,12,0	0/0:24,0:23:48.13:0,48,542	0/0:13,0:9:24.07:0,24,277	0/0:37,0:20:60.18:0,60,692	0/0:21,0:20:45.13:0,45,517	1/1:0,20:20:60.03:545,60,0	1/1:2,17:16:15:136,15,0	./.	./.	./.	1/1:2,11:12:15:137,15,0	0/1:4,3:6:21.43:21,0,29	0/0:7,2:2:3.01:0,3,32	1/1:2,1:1:3:27,3,0	./.	1/1:6,21:22:20.96:183,21,0	./.	./.	./.	./.	1/1:2,11:11:9:82,9,0	1/1:3,8:9:14.99:136,15,0	1/1:3,20:20:24:219,24,0	1/1:1,6:8:9:82,9,0
chr10	44761786	.	TG	T	156.16	PASS	AB=1.000;AC=9;AF=0.90;AN=10;DP=63;FS=0.000;HRun=3;HaplotypeScore=7.3373;MQ=11.17;MQ0=43;QD=12.01;VQSLOD=1.4697;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	./.	./.	./.	./.	1/1:0,1:1:3.01:37,3,0	1/1:2,1:2:3.01:37,3,0	1/1:2,1:1:3.01:37,3,0	./.	./.	./.	./.	./.	./.	./.	./.	1/1:0,3:3:9.03:111,9,0	./.	./.	./.	0/1:3,0:2:0:0,0,0	./.	./.	./.	./.
chr10	44763212	.	G	GA	2744.52	PASS	AC=42;AF=0.913;AN=46;BaseQRankSum=-2.343;DP=89;FS=25.922;HRun=2;HaplotypeScore=13.7496;InbreedingCoeff=0.2933;MQ=57.64;MQ0=0;MQRankSum=-2.414;QD=33.88;ReadPosRankSum=0.841;VQSLOD=1.3033;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,9:11:27.09:388,27,0	1/1:0,1:1:3.01:43,3,0	0/0:4,1:2:3.01:0,3,37	0/0:1,1:1:3.01:0,3,36	1/1:0,2:2:3.01:43,3,0	1/1:0,7:7:15.05:216,15,0	1/1:0,1:1:3.01:43,3,0	1/1:2,8:9:27.05:361,27,0	./.	./.	1/1:0,2:2:6.02:86,6,0	1/1:0,2:2:6.02:86,6,0	1/1:0,1:1:3.01:43,3,0	1/1:0,2:2:6.02:86,6,0	1/1:0,5:4:9.03:129,9,0	1/1:0,3:3:9.03:130,9,0	1/1:0,3:3:9.03:129,9,0	1/1:0,4:4:9.03:130,9,0	1/1:2,6:8:21.07:297,21,0	1/1:0,2:2:6.02:86,6,0	1/1:0,2:2:6.02:86,6,0	./.	./.	1/1:1,2:3:9.03:118,9,0	1/1:0,5:4:12.04:172,12,0	1/1:0,3:2:6.02:86,6,0	1/1:0,4:4:6.02:86,6,0	./.
chr10	44763265	.	TA	T	1127.57	PASS	AC=16;AF=0.308;AN=52;BaseQRankSum=5.173;DP=176;FS=5.925;HRun=9;HaplotypeScore=35.9617;InbreedingCoeff=0.8431;MQ=55.60;MQ0=2;MQRankSum=-0.060;QD=17.35;ReadPosRankSum=0.724;VQSLOD=3.0847;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:63.15:0,63,712	./.	0/0:8,0:5:11.97:0,12,122	0/0:5,0:3:8.99:0,9,82	0/0:4,0:4:12.04:0,12,138	0/0:7,0:7:15.04:0,15,173	0/0:3,0:3:8.86:0,9,83	1/1:6,9:13:20.99:192,21,0	0/0:2,0:2:6.02:0,6,69	1/1:4,4:8:21:187,21,0	1/1:1,1:2:6:55,6,0	0/0:3,0:3:9.03:0,9,104	0/0:2,0:2:6.02:0,6,69	0/0:3,0:3:9.03:0,9,104	1/1:3,2:5:12.01:109,12,0	1/1:1,3:4:12.01:110,12,0	1/1:8,3:11:29.94:263,30,0	1/1:6,4:10:26.79:223,27,0	0/0:14,0:14:36.06:0,36,396	0/0:5,0:5:12.04:0,12,138	0/0:3,0:3:9.03:0,9,104	./.	0/0:6,0:6:18.05:0,18,205	0/0:4,0:4:12.04:0,12,138	1/1:8,2:10:20.95:179,21,0	0/0:8,0:8:21.02:0,21,228	0/0:9,0:9:24.06:0,24,267	0/0:2,0:2:6.02:0,6,69
chr10	44763276	.	T	TA	1348.06	PASS	AB=1.000;AC=17;AF=0.315;AN=54;BaseQRankSum=6.181;DP=203;FS=3.773;HRun=9;HaplotypeScore=41.7680;InbreedingCoeff=0.6999;MQ=68.85;MQ0=2;MQRankSum=-0.188;QD=17.28;ReadPosRankSum=1.353;VQSLOD=3.4830;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:41.52:0,42,499	0/1:1,0:1:0:0,0,0	0/1:11,0:8:23.16:23,0,75	0/1:9,0:5:3.16:3,0,25	0/0:6,0:6:15:0,15,130	0/0:5,0:5:12:0,12,104	0/0:3,0:3:7.55:0,8,56	0/0:19,0:17:41.95:0,42,358	0/0:2,0:2:6:0,6,52	1/1:7,6:13:33.09:359,33,0	1/1:1,1:2:6.02:66,6,0	0/0:3,0:3:9:0,9,78	0/0:3,0:3:5.99:0,6,52	0/0:3,0:3:9:0,9,78	1/1:3,4:6:18.05:199,18,0	1/1:2,2:4:9.02:99,9,0	1/1:11,1:12:27.05:287,27,0	1/1:7,5:12:30.01:307,30,0	0/0:14,0:15:35.03:0,35,292	0/0:4,0:4:12:0,12,104	0/0:3,0:3:6:0,6,52	./.	0/0:6,0:6:18:0,18,156	0/0:6,0:6:18:0,18,156	1/1:6,1:7:18.04:186,18,0	0/0:7,0:7:17.99:0,18,156	0/0:9,0:9:26.99:0,27,234	0/0:5,0:5:15:0,15,130
chr10	44763906	.	TATGAC	T	6017.40	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-5.700;DP=625;FS=2.391;HRun=0;HaplotypeScore=200.6062;InbreedingCoeff=0.9817;MQ=67.26;MQ0=0;MQRankSum=-14.656;QD=44.91;ReadPosRankSum=2.220;VQSLOD=4.9387;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:78.25:0,78,1674	0/0:11,0:11:30.10:0,30,648	0/0:15,0:15:27.08:0,27,612	0/0:12,0:12:7.39:0,7,343	0/0:40,0:40:99:0,111,2251	0/0:30,0:30:81.28:0,81,2414	0/0:17,0:17:48.13:0,48,1255	0/0:31,0:31:90.31:0,90,2549	0/0:37,0:37:96.31:0,96,2784	0/0:38,0:38:99:0,102,2011	0/0:24,0:24:54.16:0,54,1138	1/1:1,17:18:51.18:1034,51,0	1/1:2,20:22:42.14:852,42,0	1/1:4,25:29:63.22:1271,63,0	0/0:16,0:16:42.14:0,42,827	0/0:16,0:16:42.11:0,42,882	0/0:18,0:18:48.14:0,48,1011	0/0:21,0:21:57.18:0,57,1207	0/0:22,0:22:48.09:0,48,929	0/0:23,0:23:66.19:0,66,1268	0/0:9,0:9:21.07:0,21,449	1/1:4,28:32:72.25:1461,72,0	1/1:4,20:24:48.05:974,48,0	1/1:0,9:9:21.07:425,21,0	0/0:18,0:18:54.19:0,54,1138	0/0:20,0:20:60.21:0,60,1221	0/0:35,0:35:99:0,105,2148	0/0:11,0:11:30.10:0,30,604
chr10	44764770	.	CT	C	8843.91	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=10.368;DP=515;FS=1.746;HRun=8;HaplotypeScore=52.8697;InbreedingCoeff=0.9940;MQ=68.09;MQ0=0;MQRankSum=1.472;QD=24.16;ReadPosRankSum=4.384;VQSLOD=5.3917;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,18:27:51.07:492,51,0	0/0:7,0:7:18.06:0,18,217	0/0:14,0:10:21.52:0,22,252	0/0:24,0:18:21.05:0,21,388	1/1:1,25:26:72.06:686,72,0	0/0:24,0:24:66.20:0,66,797	0/0:7,0:8:17.92:0,18,196	0/0:32,0:32:87.26:0,87,1042	0/0:18,0:18:54.17:0,54,652	1/1:2,18:20:54.05:509,54,0	1/1:3,13:16:36.05:348,36,0	1/1:0,9:9:24.04:232,24,0	1/1:1,18:19:54.09:521,54,0	1/1:1,13:14:33.05:319,33,0	1/1:1,21:22:63.10:608,63,0	1/1:1,12:13:30.05:290,30,0	0/0:22,0:22:57.17:0,57,685	1/1:2,16:18:44.63:434,45,0	1/1:1,12:13:36.06:348,36,0	1/1:2,17:19:48.01:451,48,0	1/1:1,12:13:21.03:203,21,0	1/1:1,10:11:21.03:203,21,0	1/1:0,16:16:45.07:434,45,0	1/1:0,12:12:33.05:319,33,0	1/1:1,20:21:54.04:512,54,0	1/1:3,27:30:81.11:777,81,0	1/1:0,29:29:81.13:782,81,0	1/1:2,15:17:39.06:377,39,0
chr10	44764979	.	T	TA	4578.50	PASS	AB=0.929;AC=13;AF=0.232;AN=56;BaseQRankSum=-0.143;DP=596;FS=2.166;HRun=3;HaplotypeScore=117.1046;InbreedingCoeff=0.9388;MQ=65.94;MQ0=0;MQRankSum=0.112;QD=30.12;ReadPosRankSum=-0.254;VQSLOD=4.0059;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:63.72:0,64,354	0/0:13,0:13:28.65:0,29,146	0/0:25,0:21:57.15:0,57,667	0/0:16,0:15:45.14:0,45,539	0/0:34,0:34:57.32:0,57,392	0/0:18,0:18:54.17:0,54,648	0/0:12,0:12:36.11:0,36,432	0/0:35,0:35:99:0,99,1160	0/0:18,0:18:51.16:0,51,611	1/1:0,25:25:70.09:861,70,0	1/1:4,19:22:63.61:758,64,0	0/0:16,0:16:34.04:0,34,177	0/0:24,0:24:65.94:0,66,354	0/0:17,0:17:48.40:0,48,240	1/1:2,24:26:60.19:769,60,0	1/1:1,15:16:45.08:556,45,0	0/0:13,0:13:34.80:0,35,203	1/1:2,18:20:54.15:671,54,0	0/0:29,0:29:73.64:0,74,372	0/0:29,0:29:50.56:0,51,349	0/0:10,0:10:22.89:0,23,119	0/0:20,0:20:51.88:0,52,277	0/0:26,0:26:49:0,49,326	0/1:12,1:13:1.50:2,0,142	1/1:0,29:29:75.24:962,75,0	0/0:31,0:31:46.81:0,47,330	0/0:25,0:25:69.04:0,69,361	0/0:9,0:9:23.30:0,23,135
chr10	44765157	.	A	AG	17405.70	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=14.380;DP=544;FS=0.376;HRun=0;HaplotypeScore=127.2476;InbreedingCoeff=0.9902;MQ=67.51;MQ0=0;MQRankSum=-4.734;QD=42.25;ReadPosRankSum=5.104;VQSLOD=3.9576;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,22:22:60.20:917,60,0	1/1:0,9:9:24.08:365,24,0	0/0:22,0:22:63.15:0,63,789	0/0:18,1:19:10.21:0,10,637	1/1:0,29:29:78.20:1181,78,0	0/0:27,0:27:81.27:0,81,1131	0/0:13,0:13:39.13:0,39,545	0/0:29,0:29:87.27:0,87,1173	0/0:22,0:22:63.20:0,63,863	1/1:3,21:24:72.20:1088,72,0	1/1:1,18:19:54.18:819,54,0	1/1:0,17:17:51.17:797,51,0	1/1:1,18:19:54.18:834,54,0	1/1:0,18:18:45.15:689,45,0	1/1:0,15:15:42.14:643,42,0	1/1:1,20:21:63.21:965,63,0	1/1:1,19:20:57.09:860,57,0	1/1:0,12:12:36.12:562,36,0	1/1:1,15:15:42.14:650,42,0	1/1:0,26:26:66.22:1014,66,0	1/1:0,13:13:36.12:562,36,0	1/1:0,16:15:42.06:626,42,0	1/1:0,20:20:57.19:889,57,0	1/1:1,11:12:33.11:515,33,0	1/1:1,23:23:66.09:973,66,0	1/1:1,20:20:57.19:880,57,0	1/1:1,21:22:54.18:837,54,0	1/1:0,17:17:48.16:740,48,0
chr10	44768118	.	CT	C	545.20	PASS	AB=1.000;AC=9;AF=0.750;AN=12;BaseQRankSum=-3.046;DP=81;FS=3.859;HRun=2;HaplotypeScore=30.2245;MQ=60.17;MQ0=13;MQRankSum=0.175;QD=10.10;ReadPosRankSum=1.505;VQSLOD=1.6487;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:27,0:4:8.97:0,9,79	0/1:36,0:6:7.88:8,0,57	./.	1/1:0,3:3:6.02:78,6,0	1/1:0,2:2:6.02:78,6,0	1/1:0,8:8:24.08:311,24,0	1/1:0,5:5:12.04:156,12,0	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.
chr10	44770186	.	C	CT	2537.36	PASS	AB=0.607;AC=15;AF=0.268;AN=56;BaseQRankSum=0.650;DP=482;FS=10.383;HRun=1;HaplotypeScore=156.0057;InbreedingCoeff=0.8372;MQ=63.74;MQ0=0;MQRankSum=-6.300;QD=19.08;ReadPosRankSum=1.563;VQSLOD=2.7788;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,21:24:22.35:427,22,0	0/0:11,0:11:27.83:0,28,299	0/0:17,0:17:45.14:0,45,573	0/0:14,0:13:36.12:0,36,466	1/1:4,13:17:23.93:361,24,0	0/0:20,0:20:60.19:0,60,773	0/0:14,0:14:42.14:0,42,545	0/0:36,0:36:99:0,102,1323	0/0:18,0:18:54.18:0,54,701	0/0:23,0:22:33.38:0,33,297	0/0:18,0:18:23.22:0,23,178	0/0:13,0:13:32.36:0,32,232	0/0:18,0:18:50.55:0,51,390	0/0:24,0:24:68.56:0,69,558	0/0:13,0:13:29.70:0,30,199	0/0:9,0:9:23.07:0,23,127	0/0:21,0:21:48.03:0,48,473	0/0:23,0:23:47.41:0,47,271	0/1:6,11:16:11.04:331,0,11	1/1:7,18:24:42.07:465,42,0	1/1:0,4:4:9.03:103,9,0	0/0:8,0:7:20.77:0,21,152	0/0:14,0:14:38.56:0,39,311	0/0:13,0:13:26.72:0,27,218	0/0:22,0:22:44.95:0,45,253	1/1:12,2:14:0.66:174,1,0	1/1:5,23:27:62.96:794,63,0	1/1:1,2:3:6.02:69,6,0
chr10	44770188	.	A	AT	7394.10	PASS	AB=1.000;AC=43;AF=0.768;AN=56;BaseQRankSum=14.008;DP=485;FS=10.622;HRun=8;HaplotypeScore=139.8296;InbreedingCoeff=0.8772;MQ=63.53;MQ0=0;MQRankSum=-7.106;QD=20.20;ReadPosRankSum=4.376;VQSLOD=3.5810;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:25:23.19:428,23,0	1/1:11,0:11:24.37:108,24,0	0/0:17,0:17:42.02:0,42,384	0/0:15,0:13:30.01:0,30,275	1/1:17,0:16:26.99:382,27,0	0/0:19,0:20:53.06:0,53,473	0/0:15,0:15:36:0,36,325	0/0:34,0:34:84.04:0,84,769	0/0:18,0:18:51.03:0,51,467	1/1:1,21:21:63.19:725,63,0	1/1:3,15:18:14.68:422,15,0	1/1:0,0:13:31.25:159,31,0	1/1:6,1:22:50.15:275,50,0	1/1:2,0:24:62.75:328,63,0	1/1:2,11:13:33.10:381,33,0	1/1:1,8:9:24.07:277,24,0	1/1:20,0:20:42.85:179,43,0	1/1:2,21:23:51.15:586,51,0	0/1:19,0:18:7.27:346,0,7	1/1:22,0:21:39.11:445,39,0	1/1:5,0:5:9.03:103,9,0	1/1:2,0:7:17.04:86,17,0	1/1:4,0:14:31.33:162,31,0	1/1:4,0:13:19.89:101,20,0	1/1:0,21:21:63.19:727,63,0	1/1:8,6:14:21.06:240,21,0	1/1:28,2:28:66.34:865,66,0	1/1:3,0:3:6.02:69,6,0
chr10	44770190	.	T	TTA	2841.84	PASS	AB=1.000;AC=16;AF=0.286;AN=56;BaseQRankSum=-1.004;DP=486;FS=0.863;HRun=0;HaplotypeScore=164.6203;InbreedingCoeff=0.8271;MQ=62.41;MQ0=0;MQRankSum=-5.766;QD=19.46;ReadPosRankSum=2.546;VQSLOD=3.6807;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:25:23.69:0,24,119	1/1:0,9:9:27.09:467,27,0	0/0:17,0:17:48.12:0,48,684	0/0:14,0:12:36.08:0,36,493	0/1:18,0:17:1.43:1,0,80	0/0:20,0:20:57.16:0,57,829	0/0:15,0:15:45.12:0,45,628	0/0:30,0:30:90.29:0,90,1342	0/0:18,0:18:54.17:0,54,804	0/0:22,0:21:46.78:0,47,152	0/0:16,0:16:34.84:0,35,157	1/1:13,0:13:32.89:270,33,0	1/1:22,0:22:18.80:352,19,0	1/1:27,0:27:23.72:439,24,0	0/0:12,0:12:27.39:0,27,98	0/0:10,0:10:20.77:0,21,86	1/1:3,19:23:54.19:967,54,0	0/0:23,0:23:46.50:0,47,185	0/0:18,0:17:29.90:0,30,181	0/0:23,0:22:33.08:0,33,138	0/0:6,0:6:7.89:0,8,33	1/1:8,0:7:18.01:164,18,0	1/1:14,0:14:11.94:228,12,0	0/1:12,0:12:12.95:150,0,13	0/0:22,0:22:46.62:0,47,150	0/0:14,0:14:24.61:0,25,116	0/0:32,0:30:51.48:0,51,205	0/0:3,0:3:6.63:0,7,35
chr10	44770489	.	T	TG	94.84	PASS	AB=0.800;AC=16;AF=0.533;AN=30;BaseQRankSum=3.067;DP=178;FS=0.000;HRun=0;HaplotypeScore=35.8514;InbreedingCoeff=0.4691;MQ=60.38;MQ0=29;MQRankSum=1.178;QD=5.58;ReadPosRankSum=-3.826;VQSLOD=2.3212;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:20,0:6:14.53:0,15,161	0/0:33,0:13:20.75:0,21,228	1/1:1,0:1:3:25,3,0	0/0:25,0:22:43.94:0,44,566	0/0:22,0:22:48.25:0,48,661	0/0:20,0:20:60.20:0,60,834	0/0:17,0:14:30.98:0,31,407	1/1:2,0:2:3:27,3,0	1/1:1,0:1:3:26,3,0	1/1:0,1:1:2.96:19,3,0	1/1:1,0:1:2.99:24,3,0	./.	./.	./.	0/1:5,0:3:1.70:17,0,2	./.	1/1:2,0:1:3:27,3,0	./.	./.	./.	./.	./.	1/1:0,1:1:2.92:17,3,0	0/1:1,0:3:32.99:34,0,33	./.	./.
chr10	44770615	.	AAAG	A	348.40	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=1.707;DP=468;FS=11.696;HRun=0;HaplotypeScore=194.9180;InbreedingCoeff=0.8506;MQ=65.74;MQ0=0;MQRankSum=-3.642;QD=23.23;ReadPosRankSum=-0.390;VQSLOD=2.4291;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:42.14:0,42,922	1/1:1,9:10:24.03:361,24,0	0/0:18,0:18:39.13:0,39,868	0/0:22,0:20:31.31:0,31,997	0/0:11,0:11:30.10:0,30,654	0/0:12,0:11:30.10:0,30,642	0/0:29,0:28:72.15:0,72,1450	0/0:21,0:21:51.18:0,51,1137	0/0:14,0:14:39.13:0,39,867	0/0:20,0:20:57.20:0,57,1270	0/0:22,0:22:59.99:0,60,1173	0/0:19,0:19:54.19:0,54,1197	0/0:20,0:20:60.21:0,60,1332	0/0:26,0:26:75.26:0,75,1611	0/0:29,0:29:78.27:0,78,1723	0/0:18,0:18:54.19:0,54,1202	1/1:1,4:5:6.02:98,6,0	0/0:3,0:3:9.03:0,9,201	0/0:16,0:15:39.13:0,39,849	0/0:33,0:33:87.21:0,87,1800	0/0:8,0:8:17.99:0,18,339	0/0:17,0:17:48.16:0,48,1051	0/0:18,0:18:51.13:0,51,1057	0/0:5,0:5:5.70:0,6,133	0/0:20,0:18:54.19:0,54,1170	0/0:16,0:16:42.09:0,42,865	0/0:17,0:17:45.09:0,45,946	0/0:5,0:5:15.05:0,15,334
chr10	44770693	.	GC	G	13634.94	PASS	AC=54;AF=0.964;AN=56;BaseQRankSum=-1.700;DP=416;FS=0.000;HRun=1;HaplotypeScore=219.2691;InbreedingCoeff=0.4664;MQ=32.70;MQ0=2;MQRankSum=-1.732;QD=33.01;ReadPosRankSum=1.436;VQSLOD=4.3039;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,9:9:24.08:335,24,0	1/1:0,11:11:33.11:460,33,0	1/1:0,4:3:6.02:74,6,0	0/0:2,1:1:2.97:0,3,20	1/1:0,16:15:27.09:377,27,0	1/1:0,18:17:39.13:544,39,0	1/1:0,21:18:27.09:377,27,0	1/1:0,18:11:24.07:318,24,0	1/1:0,17:16:45.15:625,45,0	1/1:1,29:29:78.26:1084,78,0	1/1:0,13:13:15.05:209,15,0	1/1:0,12:12:36.12:502,36,0	1/1:0,15:15:42.14:585,42,0	1/1:0,23:23:66.22:920,66,0	1/1:0,26:26:66.22:921,66,0	1/1:0,21:21:60.20:837,60,0	1/1:0,3:3:9.03:126,9,0	1/1:0,5:5:15.05:209,15,0	1/1:0,10:10:30.09:403,30,0	1/1:0,23:23:51.17:712,51,0	1/1:0,7:7:6.02:84,6,0	1/1:0,28:28:75.25:1046,75,0	1/1:0,18:18:39.13:544,39,0	1/1:0,4:4:9.03:125,9,0	1/1:0,22:21:57.19:795,57,0	1/1:0,17:16:48.16:670,48,0	1/1:0,19:19:51.17:712,51,0	1/1:0,3:3:3.01:42,3,0
chr10	44771064	.	AT	A	17225.08	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=16.268;DP=665;FS=1.094;HRun=1;HaplotypeScore=134.5332;InbreedingCoeff=0.9974;MQ=75.43;MQ0=0;MQRankSum=-6.412;QD=33.97;ReadPosRankSum=6.886;VQSLOD=4.1290;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,27:29:75.44:908,75,0	1/1:0,7:7:21.02:247,21,0	0/0:29,0:29:74.27:0,74,1077	0/0:13,0:12:30.61:0,31,378	1/1:0,24:24:72.08:844,72,0	0/0:30,0:30:90.28:0,90,1357	0/0:30,0:30:90.28:0,90,1360	0/0:29,0:29:87.28:0,87,1319	0/0:27,0:27:81.22:0,81,1197	1/1:1,28:29:84.25:1032,84,0	1/1:0,29:29:78.16:949,78,0	1/1:1,21:22:57.14:711,57,0	1/1:1,25:26:75.24:952,75,0	1/1:1,23:24:72.02:824,72,0	1/1:1,24:25:61.08:768,61,0	1/1:0,25:25:60.19:763,60,0	1/1:0,20:20:54.17:685,54,0	1/1:0,18:18:51.16:643,51,0	1/1:0,25:25:75.20:918,75,0	1/1:0,28:28:75.15:932,75,0	1/1:2,19:21:61.43:760,61,0	1/1:0,20:20:54.14:668,54,0	1/1:3,21:24:70.32:808,70,0	1/1:0,12:12:36.07:433,36,0	1/1:1,31:32:85.11:1052,85,0	1/1:2,33:35:99:1221,100,0	1/1:0,26:26:69.22:882,69,0	1/1:0,6:6:18.06:226,18,0
chr10	44771701	.	T	TCA	17086.32	PASS	AB=0.615;AC=43;AF=0.768;AN=56;BaseQRankSum=1.937;DP=735;FS=2.663;HRun=0;HaplotypeScore=127.1543;InbreedingCoeff=0.9042;MQ=59.15;MQ0=16;MQRankSum=0.913;QD=33.83;ReadPosRankSum=7.733;VQSLOD=6.6005;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,25:32:33.62:1100,34,0	1/1:0,11:11:33.11:561,33,0	0/0:61,0:25:61.64:0,62,788	0/0:54,0:34:61.64:0,62,737	1/1:2,16:18:42.14:714,42,0	0/0:27,0:27:75.19:0,75,955	0/0:21,0:21:44.74:0,45,570	0/0:37,0:37:90.27:0,90,1133	0/0:30,0:30:75.23:0,75,961	1/1:3,21:23:60.17:983,60,0	1/1:3,20:23:45.15:765,45,0	1/1:5,17:21:51.17:854,51,0	1/1:4,22:26:51.17:866,51,0	1/1:9,22:31:57.19:958,57,0	1/1:4,24:27:54.18:909,54,0	1/1:3,16:18:36.12:612,36,0	1/1:2,14:16:33.11:560,33,0	1/1:1,11:12:30.10:498,30,0	1/1:8,15:20:42.14:698,42,0	1/1:6,15:21:36.12:612,36,0	1/1:10,28:37:51.53:1152,52,0	1/1:3,17:20:45.15:765,45,0	1/1:4,13:17:30.10:510,30,0	1/1:3,18:21:36.12:613,36,0	1/1:2,24:24:15.17:828,15,0	1/1:10,23:31:72.22:1173,72,0	1/1:3,24:27:63.22:1071,63,0	0/1:6,10:16:10.61:284,0,11
chr10	44771744	.	AGATG	A	4481.18	PASS	AB=0.841;AC=27;AF=0.482;AN=56;BaseQRankSum=10.988;DP=634;FS=3.909;HRun=0;HaplotypeScore=227.0004;InbreedingCoeff=-0.2110;MQ=61.48;MQ0=3;MQRankSum=-0.240;QD=9.39;ReadPosRankSum=-2.262;VQSLOD=3.7491;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:23,8:30:22.65:287,23,0	0/1:6,5:11:41.91:145,0,42	0/0:24,0:21:45.01:0,45,450	0/0:19,0:16:24.98:0,25,261	0/1:27,5:30:39.12:157,0,39	0/0:19,0:19:51.06:0,51,792	0/0:20,0:20:56.90:0,57,789	0/0:49,0:48:99:0,100,1153	0/0:26,0:26:78.12:0,78,1365	0/1:20,6:26:99:244,0,221	0/1:15,7:22:99:271,0,136	1/1:15,5:20:6.30:234,6,0	0/1:14,4:18:59.80:191,0,60	1/1:27,5:32:43.83:339,44,0	0/1:25,3:28:99:222,0,291	0/1:12,4:16:99:111,0,203	0/1:8,1:9:18.05:103,0,18	0/1:14,2:15:69.94:70,0,216	0/1:21,3:21:67.62:283,0,68	0/1:22,2:23:3.54:201,0,4	1/1:12,7:19:10.79:322,11,0	0/1:11,3:13:30.74:107,0,31	0/1:20,3:23:61.15:142,0,61	0/1:9,4:13:8.59:128,0,9	0/1:26,6:32:99:186,0,382	0/1:25,3:28:99:310,0,340	0/1:28,7:35:99:369,0,100	1/1:4,0:4:9.34:58,9,0
chr10	44771748	.	G	GATGGATAGATA	3657.35	PASS	AB=0.980;AC=28;AF=0.500;AN=56;BaseQRankSum=9.498;DP=629;FS=24.215;HRun=0;HaplotypeScore=314.3780;InbreedingCoeff=-0.1924;MQ=57.59;MQ0=4;MQRankSum=0.819;QD=7.54;ReadPosRankSum=0.115;VQSLOD=1.1740;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:31,0:30:8.55:9,0,43	0/1:11,0:11:19.36:25,0,19	0/0:17,0:15:39.10:0,39,620	0/0:15,0:12:3.63:0,4,433	0/1:32,0:30:35.20:35,0,44	0/0:17,0:17:51.16:0,51,1121	0/0:19,0:19:54.14:0,54,1014	0/0:49,0:48:1.68:0,2,1689	0/0:26,0:26:78.24:0,78,1844	0/1:29,0:29:86.76:87,0,646	0/1:22,0:22:71.72:72,0,335	0/1:18,1:19:53.08:163,0,53	0/1:18,1:19:16.41:313,0,16	1/1:30,1:32:25.28:306,25,0	0/1:30,0:30:32.78:33,0,663	0/1:18,0:18:17.92:18,0,412	0/1:10,0:10:9.28:9,0,46	0/1:15,0:14:1.33:1,0,322	0/1:23,0:21:37.37:413,0,37	0/1:20,3:22:7.79:335,0,8	0/1:18,0:18:20.22:31,0,20	1/1:13,1:13:12.84:83,13,0	1/1:18,0:22:2.64:195,3,0	1/1:13,0:14:4.03:32,4,0	0/1:33,0:33:57.72:58,0,1103	0/1:25,2:27:30.08:511,0,30	1/1:31,5:36:24.09:795,24,0	1/1:6,0:6:7.67:133,8,0
chr10	44771973	.	TTGA	T	1337.80	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.020;DP=489;FS=0.000;HRun=0;HaplotypeScore=75.6622;InbreedingCoeff=0.9325;MQ=66.70;MQ0=0;MQRankSum=-1.135;QD=38.22;ReadPosRankSum=-3.312;VQSLOD=3.0516;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:75.26:0,75,1569	0/0:5,0:5:12.04:0,12,251	0/0:12,0:12:20.91:0,21,498	0/0:8,0:8:18.06:0,18,387	0/0:20,0:20:54.19:0,54,1162	0/0:25,0:25:75.26:0,75,1656	0/0:11,0:10:20.84:0,21,468	1/1:5,30:35:71.39:1433,71,0	0/0:19,0:19:57.18:0,57,1197	0/0:20,0:20:54.19:0,54,1206	0/0:19,0:19:54.18:0,54,1146	0/0:13,0:13:39.11:0,39,776	0/0:20,0:20:51.17:0,51,1095	0/0:23,0:23:69.24:0,69,1495	0/0:28,0:28:72.23:0,72,1486	0/0:15,0:15:45.14:0,45,895	0/0:16,0:15:42.14:0,42,900	0/0:19,0:19:54.19:0,54,1197	0/0:23,0:23:60.21:0,60,1257	0/0:22,0:22:60.21:0,60,1305	0/0:12,0:12:33.11:0,33,684	0/0:5,0:5:15.05:0,15,335	0/0:8,0:8:18.06:0,18,394	0/0:16,0:16:45.15:0,45,1005	0/0:18,0:18:54.17:0,54,1157	0/0:20,0:20:60.21:0,60,1333	0/0:22,0:22:63.22:0,63,1351	0/0:9,0:9:27.09:0,27,543
chr10	44772124	.	AACACACACACACACAC	A	6842.10	PASS	AB=0.584;AC=24;AF=0.429;AN=56;BaseQRankSum=5.460;DP=473;FS=6.645;HRun=0;HaplotypeScore=192.5226;InbreedingCoeff=0.5697;MQ=54.18;MQ0=27;MQRankSum=-4.859;QD=30.01;ReadPosRankSum=2.902;VQSLOD=3.5080;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:12,13:26:0.66:454,1,0	0/0:4,0:6:15.05:0,15,1075	0/0:27,0:8:5.81:0,6,58	0/0:20,0:10:2.22:0,2,7	1/1:5,15:18:20.76:288,21,0	0/0:15,0:15:27.08:0,27,1597	0/0:33,0:34:57.52:0,58,3121	0/0:39,0:37:47.31:0,47,1452	0/0:10,0:10:30.09:0,30,1618	0/0:4,0:9:15.05:0,15,298	0/0:5,0:14:18.06:0,18,490	1/1:3,1:9:12.04:347,12,0	1/1:6,0:16:9.83:490,10,0	1/1:5,0:14:18.06:429,18,0	0/0:5,0:14:27.09:0,27,588	0/0:5,0:6:3.01:0,3,71	0/0:19,0:23:51.18:0,51,3349	0/0:8,0:14:10.92:0,11,191	1/1:14,10:19:26.47:762,26,0	1/1:2,9:11:27.01:785,27,0	1/1:18,0:17:5.95:135,6,0	0/1:0,1:7:35.54:190,0,36	0/1:6,1:16:14.68:397,0,15	0/1:6,0:13:26.31:63,0,26	0/0:2,0:12:12.04:0,12,279	1/1:7,10:17:22.20:815,22,0	0/1:4,11:15:28.06:820,0,28	1/1:3,17:20:16.82:866,17,0
chr10	44772307	.	A	ACAGTCCC	14121.77	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-6.405;DP=274;FS=7.314;HRun=0;HaplotypeScore=60.3900;InbreedingCoeff=0.8332;MQ=66.76;MQ0=0;MQRankSum=-10.720;QD=73.94;ReadPosRankSum=3.291;VQSLOD=4.6067;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,14:16:38.34:1442,38,0	1/1:0,0:3:9.03:369,9,0	0/0:17,0:17:51.17:0,51,1243	0/0:16,0:15:36.12:0,36,936	1/1:2,11:15:6.02:191,6,0	0/0:8,0:8:21.07:0,21,526	0/0:14,0:14:39.10:0,39,906	0/0:18,0:18:48.16:0,48,1237	0/0:10,0:10:30.10:0,30,780	1/1:2,9:13:33.10:1210,33,0	1/1:0,10:12:11.93:501,12,0	1/1:1,9:12:24.08:918,24,0	1/1:1,11:14:21.07:793,21,0	1/1:2,9:14:27.09:1113,27,0	1/1:0,6:6:18.06:752,18,0	1/1:2,7:10:24.08:828,24,0	1/1:2,2:4:9.03:377,9,0	1/1:0,5:5:9.03:377,9,0	1/1:0,5:6:18.06:694,18,0	1/1:1,8:9:21.02:636,21,0	1/1:0,4:6:3.01:66,3,0	1/1:0,5:6:12.04:413,12,0	1/1:1,4:5:6.02:251,6,0	1/1:0,2:2:3.01:126,3,0	1/1:1,6:7:18.06:733,18,0	1/1:3,8:15:39.09:1207,39,0	1/1:0,6:6:18.06:751,18,0	1/1:0,3:4:9.03:377,9,0
chr10	44772678	.	CTGGATCCTGTCAGCAAGTACT	C	8553.72	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=10.538;DP=573;FS=1.107;HRun=0;HaplotypeScore=407.4663;InbreedingCoeff=0.9785;MQ=66.59;MQ0=1;MQRankSum=-10.481;QD=101.83;ReadPosRankSum=2.748;VQSLOD=3.2565;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,120,10413	0/0:5,0:5:15.05:0,15,1292	0/0:26,0:25:69.24:0,69,4543	0/0:24,0:24:69.24:0,69,4624	0/0:20,0:20:56.94:0,57,4627	0/0:13,0:13:39.13:0,39,3470	0/0:15,0:15:45.15:0,45,3332	0/0:33,0:33:99:0,99,8054	0/0:22,0:22:66.23:0,66,5723	0/0:23,0:23:69.24:0,69,5961	0/0:11,0:11:30.10:0,30,2488	1/1:9,8:17:24.08:1429,24,0	1/1:6,16:22:60.17:3070,60,0	1/1:5,11:16:36.08:1984,36,0	0/0:31,0:31:93.32:0,93,8558	0/0:24,0:24:63.22:0,63,5703	0/0:31,0:31:90.25:0,90,7751	0/0:19,0:19:51.18:0,51,4470	0/0:24,0:23:66.23:0,66,5109	0/0:12,0:12:36.12:0,36,3380	0/0:57,0:57:99:0,172,15840	1/1:5,8:13:15.05:736,15,0	1/1:0,8:8:18.06:979,18,0	1/1:6,2:8:9.02:356,9,0	0/0:8,0:8:21.06:0,21,1839	0/0:18,0:18:54.19:0,54,5026	0/0:20,0:20:54.19:0,54,4869	0/0:13,0:13:39.13:0,39,3801
chr10	44772716	.	A	AG	21395.59	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=11.368;DP=651;FS=0.722;HRun=0;HaplotypeScore=166.0970;InbreedingCoeff=0.9950;MQ=71.42;MQ0=0;MQRankSum=-6.227;QD=42.20;ReadPosRankSum=5.772;VQSLOD=3.8731;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,46:47:99:1966,123,0	1/1:0,5:5:15.05:240,15,0	0/0:35,0:35:99:0,105,1365	0/0:28,0:28:84.22:0,84,1142	1/1:1,24:24:60.20:957,60,0	0/0:16,0:16:45.13:0,45,611	0/0:13,0:13:39.13:0,39,546	0/0:30,0:30:81.25:0,81,1102	0/0:22,0:22:66.22:0,66,914	1/1:3,21:24:66.18:1025,66,0	1/1:1,13:14:36.12:575,36,0	1/1:0,21:21:57.19:906,57,0	1/1:0,21:21:63.21:1004,63,0	1/1:1,25:26:69.24:1099,69,0	1/1:1,32:33:96.33:1535,96,0	1/1:0,18:18:42.14:672,42,0	1/1:1,30:31:75.24:1199,75,0	1/1:0,19:19:51.17:815,51,0	1/1:1,23:22:66.18:1027,66,0	1/1:0,25:25:75.26:1192,75,0	1/1:3,47:50:99:2206,138,0	1/1:1,15:16:42.14:669,42,0	1/1:2,21:23:57.19:908,57,0	1/1:1,16:17:17.80:287,18,0	1/1:0,11:11:33.11:527,33,0	1/1:0,20:20:60.20:959,60,0	1/1:0,20:20:54.18:862,54,0	1/1:1,16:17:48.16:767,48,0
chr10	44772907	.	A	AT	5171.51	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-6.010;DP=675;FS=2.947;HRun=8;HaplotypeScore=97.6261;InbreedingCoeff=0.9979;MQ=61.70;MQ0=1;MQRankSum=4.590;QD=29.22;ReadPosRankSum=0.571;VQSLOD=4.1248;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,19:23:51.15:588,51,0	0/0:0,0:12:20.37:0,20,60	0/0:15,0:10:22.60:0,23,178	0/0:14,0:14:22.87:0,23,175	1/1:2,24:26:72.21:831,72,0	0/0:29,0:29:81.04:0,81,741	0/0:16,0:16:45.02:0,45,412	0/0:31,0:31:72:0,72,654	0/0:33,0:33:96.05:0,96,878	0/0:31,0:31:87.03:0,87,793	0/0:24,0:24:63.01:0,63,568	0/0:29,0:29:81.04:0,81,741	0/0:31,0:31:81.03:0,81,737	0/0:23,0:23:63:0,63,566	0/0:24,0:24:47.50:0,47,607	0/0:24,0:24:57.02:0,57,522	0/0:2,0:28:46.85:0,47,138	0/0:26,0:26:69.03:0,69,632	1/1:3,13:14:33.10:381,33,0	1/1:1,28:29:56.78:907,57,0	1/1:2,15:16:39.12:450,39,0	0/0:27,0:27:69.02:0,69,631	0/0:26,0:26:71.99:0,72,649	0/0:21,0:21:60.03:0,60,549	0/0:33,0:33:87.03:0,87,796	1/1:3,22:25:41.73:732,42,0	1/1:1,32:33:87.26:1004,87,0	1/1:0,8:8:24.07:277,24,0
chr10	44773159	.	T	TA	901.86	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-5.887;DP=601;FS=1.655;HRun=3;HaplotypeScore=62.8049;InbreedingCoeff=0.9800;MQ=65.12;MQ0=0;MQRankSum=-0.149;QD=34.69;ReadPosRankSum=2.524;VQSLOD=4.3703;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:42.13:0,42,515	1/1:1,4:5:12.04:173,12,0	0/0:16,0:16:22.36:0,22,380	0/0:9,0:9:21.04:0,21,227	0/0:33,0:33:99:0,99,1214	0/0:26,0:26:75.24:0,75,930	0/0:10,0:10:30.09:0,30,371	0/0:32,0:32:87.26:0,87,1066	0/0:25,0:25:72.23:0,72,892	0/0:30,0:30:84.26:0,84,1040	0/0:22,0:22:66.21:0,66,818	0/0:20,0:20:60.19:0,60,744	0/0:23,0:23:66.21:0,66,818	0/0:20,0:20:60.19:0,60,744	0/0:27,0:27:78.22:0,78,943	0/0:15,0:15:45.14:0,45,558	1/1:2,19:21:60.19:846,60,0	0/0:16,0:16:45.14:0,45,558	0/0:18,0:18:51.14:0,51,606	0/0:26,0:26:78.23:0,78,950	0/0:23,0:23:54.17:0,54,669	0/0:28,0:28:81.25:0,81,1004	0/0:23,0:23:69.20:0,69,842	0/0:29,0:29:84.22:0,84,1024	0/0:24,0:24:63.20:0,63,780	0/0:22,0:22:60.19:0,60,743	0/0:30,0:30:84.26:0,84,1038	0/0:13,0:13:39.12:0,39,483
chr10	44773211	.	AT	A	4645.22	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=12.191;DP=616;FS=6.599;HRun=7;HaplotypeScore=70.1808;InbreedingCoeff=0.9126;MQ=75.01;MQ0=0;MQRankSum=-0.467;QD=24.71;ReadPosRankSum=1.239;VQSLOD=5.3397;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,18:20:54.12:551,54,0	0/1:11,0:11:63.54:64,0,199	0/0:13,0:13:30.08:0,30,361	0/0:15,0:16:21.85:0,22,282	1/1:5,29:34:77.96:795,78,0	0/0:32,0:32:90.28:0,90,1119	0/0:11,0:11:33.11:0,33,415	0/0:27,0:27:78.24:0,78,970	0/0:21,0:21:63.20:0,63,793	0/0:24,0:24:66.20:0,66,817	0/0:25,0:25:36.02:0,36,749	0/0:19,0:19:51.16:0,51,642	0/0:26,0:26:75.24:0,75,943	0/0:21,0:21:60.19:0,60,755	0/0:27,0:27:69.22:0,69,868	0/0:25,0:25:72.18:0,72,876	0/0:22,0:22:60.19:0,60,754	0/0:12,0:12:27.05:0,27,323	1/1:1,17:18:51.11:520,51,0	1/1:4,31:35:90.19:917,90,0	1/1:2,16:18:39.08:398,39,0	0/0:20,0:20:57.17:0,57,706	0/0:30,0:30:81.26:0,81,1019	0/0:24,0:24:66.19:0,66,816	0/0:33,0:33:81.26:0,81,1019	1/1:3,17:20:16.38:483,16,0	1/1:1,22:23:63.14:642,63,0	1/1:0,9:9:27.06:275,27,0
chr10	44773293	.	G	GA	4473.73	PASS	AB=0.632;AC=11;AF=0.196;AN=56;BaseQRankSum=-13.735;DP=614;FS=0.000;HRun=5;HaplotypeScore=75.3114;InbreedingCoeff=0.8801;MQ=70.15;MQ0=0;MQRankSum=0.650;QD=30.03;ReadPosRankSum=1.643;VQSLOD=5.4223;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:54.13:0,54,580	0/0:6,0:6:12.03:0,12,129	0/0:22,0:22:49.59:0,50,519	0/0:19,0:17:41.14:0,41,404	0/0:29,0:29:60.11:0,60,630	0/0:37,0:37:99:0,105,1120	0/0:18,0:18:45.09:0,45,474	0/0:23,0:23:57.13:0,57,606	0/0:20,0:20:57.14:0,57,613	1/1:6,28:33:25.82:1026,26,0	0/1:15,21:36:99:802,0,194	0/0:16,0:16:45.11:0,45,484	0/0:16,0:16:42.10:0,42,451	0/0:19,0:19:48.12:0,48,516	1/1:2,18:20:51.17:671,51,0	1/1:2,18:20:51.17:671,51,0	0/0:13,0:13:39.10:0,39,419	1/1:1,11:12:30.10:395,30,0	0/0:22,0:20:54.14:0,54,580	0/0:39,0:39:99:0,117,1249	0/0:14,0:14:39.08:0,39,410	0/0:18,0:18:54.14:0,54,580	0/0:33,0:33:96.24:0,96,1031	0/0:18,0:18:54.11:0,54,571	1/1:2,25:27:69.22:908,69,0	0/0:19,0:19:51.12:0,51,542	0/0:34,0:34:93.22:0,93,992	0/0:10,0:10:30.08:0,30,322
chr10	44773487	.	CAA	C	4902.46	PASS	AB=0.636;AC=28;AF=0.500;AN=56;BaseQRankSum=-4.098;DP=577;FS=5.647;HRun=11;HaplotypeScore=105.5967;InbreedingCoeff=0.8204;MQ=68.96;MQ0=2;MQRankSum=1.812;QD=20.77;ReadPosRankSum=4.516;VQSLOD=4.1871;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:22:44.34:0,44,204	1/1:2,0:3:2.74:12,3,0	0/0:27,0:20:25.08:0,25,356	0/0:30,0:20:28:0,28,316	0/0:3,0:27:57.27:0,57,197	0/0:35,0:36:86.71:0,87,1269	0/0:15,0:19:27.08:0,27,396	0/0:38,0:40:77.74:0,78,1144	0/0:24,0:27:77.07:0,77,991	1/1:4,14:19:45.11:479,45,0	1/1:4,12:17:32.15:349,32,0	1/1:1,14:15:36.07:383,36,0	1/1:1,15:16:42.06:447,42,0	1/1:2,15:17:45.10:479,45,0	1/1:9,11:20:8.33:344,8,0	1/1:5,8:13:27.04:287,27,0	0/1:8,0:17:9.69:68,0,10	1/1:4,12:16:36.07:383,36,0	0/0:10,1:23:6.46:0,6,95	0/0:2,1:22:18.21:0,18,129	0/0:2,0:26:39.57:0,40,148	1/1:0,12:12:30.06:319,30,0	1/1:5,16:21:42.09:447,42,0	1/1:0,11:11:24.06:255,24,0	1/1:2,23:25:60.14:639,60,0	0/1:5,0:13:11.47:11,0,39	0/0:5,0:24:55.91:0,56,227	0/0:5,0:14:25.80:0,26,114
chr10	44773647	.	A	AT	13667.16	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=12.932;DP=595;FS=16.065;HRun=6;HaplotypeScore=130.4937;InbreedingCoeff=0.9708;MQ=61.91;MQ0=1;MQRankSum=2.210;QD=30.92;ReadPosRankSum=4.983;VQSLOD=3.0909;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,21:27:11.10:702,11,0	1/1:0,6:6:15.05:189,15,0	0/0:19,0:19:51.11:0,51,519	0/0:8,0:8:7.83:0,8,112	1/1:3,18:21:57.18:714,57,0	0/0:26,0:26:72.12:0,72,724	0/0:11,0:11:27.03:0,27,266	0/0:64,0:55:99:0,132,1321	0/0:25,0:25:69.12:0,69,689	1/1:7,18:25:60.16:738,60,0	1/1:0,27:27:75.24:943,75,0	1/1:1,17:18:51.16:642,51,0	1/1:1,23:24:69.22:868,69,0	1/1:1,14:15:39.12:491,39,0	1/1:4,22:26:44.73:771,45,0	1/1:1,14:15:42.13:528,42,0	1/1:2,9:11:26.82:314,27,0	1/1:3,14:17:21.54:470,22,0	1/1:7,19:24:18.99:637,19,0	1/1:10,17:27:44.70:757,45,0	1/1:10,14:22:23.67:507,24,0	1/1:2,15:17:45.14:566,45,0	1/1:0,19:19:57.18:717,57,0	1/1:0,10:10:27.09:340,27,0	1/1:3,23:26:72.19:888,72,0	1/1:4,15:19:45.14:566,45,0	1/1:1,28:28:75.20:943,75,0	1/1:2,10:12:30.10:377,30,0
chr10	44773916	.	TA	T	5764.98	PASS	AB=0.833;AC=25;AF=0.446;AN=56;BaseQRankSum=-1.740;DP=566;FS=8.816;HRun=9;HaplotypeScore=98.3835;InbreedingCoeff=0.9232;MQ=70.46;MQ0=1;MQRankSum=-1.742;QD=21.04;ReadPosRankSum=3.905;VQSLOD=4.8426;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:2,0:13:28.54:0,29,151	0/0:3,0:10:22.56:0,23,112	0/0:12,0:14:13.58:0,14,254	0/1:16,1:18:15.70:16,0,180	0/0:1,0:28:58.09:0,58,349	0/0:25,0:25:63.19:0,63,727	0/0:7,0:7:18.01:0,18,193	0/0:39,0:46:82.18:0,82,998	0/0:18,0:18:48.14:0,48,554	1/1:5,20:28:62.07:555,62,0	1/1:5,20:26:60.03:549,60,0	1/1:3,12:15:33.01:302,33,0	1/1:4,20:24:57.03:522,57,0	1/1:2,19:21:54.02:494,54,0	1/1:2,17:19:48.03:439,48,0	1/1:1,21:20:51.03:467,51,0	0/0:3,0:21:52.15:0,52,267	1/1:1,15:16:45.02:412,45,0	0/0:6,0:18:27.14:0,27,149	0/0:0,0:17:42.55:0,43,216	0/0:3,0:13:19.89:0,20,101	1/1:2,15:17:45.01:409,45,0	1/1:0,19:19:54.03:494,54,0	1/1:1,13:14:19.17:310,19,0	1/1:2,31:33:87.04:796,87,0	0/0:3,0:20:45.68:0,46,245	0/0:1,0:24:48.33:0,48,246	0/0:0,0:13:36.93:0,37,188
chr10	44775881	.	G	GGTT	2628.21	PASS	AB=0.723;AC=12;AF=0.214;AN=56;BaseQRankSum=-2.174;DP=704;FS=15.753;HRun=0;HaplotypeScore=109.1353;InbreedingCoeff=0.7570;MQ=57.63;MQ0=19;MQRankSum=-9.335;QD=20.53;ReadPosRankSum=1.739;VQSLOD=2.5198;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,18:18:12.04:264,12,0	0/0:10,0:10:24.08:0,24,377	0/0:23,0:18:42.14:0,42,639	0/0:27,0:24:45.74:0,46,900	1/1:6,11:16:12.04:264,12,0	0/0:24,0:24:69.24:0,69,1109	0/0:25,0:25:69.22:0,69,1077	0/0:31,0:28:81.21:0,81,1180	0/0:35,0:35:96.31:0,96,1501	0/0:31,0:30:75.23:0,75,1136	0/0:21,0:21:54.18:0,54,863	0/0:34,0:34:96.33:0,96,1540	0/0:38,0:38:99:0,105,1625	0/0:41,0:41:99:0,120,1909	0/0:37,0:37:99:0,111,1773	0/0:38,0:38:99:0,102,1624	0/0:29,0:29:75.26:0,75,1192	0/0:30,0:30:90.31:0,90,1424	1/1:5,5:5:9.03:198,9,0	1/1:1,14:13:27.09:569,27,0	0/1:7,2:5:6.96:60,0,7	0/0:25,0:25:69.23:0,69,1088	0/0:26,0:26:75.26:0,75,1205	0/0:26,0:26:72.25:0,72,1151	0/0:20,0:20:51.16:0,51,796	0/1:9,13:19:99:720,0,100	1/1:5,22:26:33.07:726,33,0	0/0:0,5:2:0:0,0,0
chr10	44776003	.	CT	C	6312.74	PASS	AB=0.632;AC=14;AF=0.250;AN=56;BaseQRankSum=18.122;DP=814;FS=2.724;HRun=3;HaplotypeScore=140.5584;InbreedingCoeff=0.7943;MQ=51.09;MQ0=60;MQRankSum=-6.219;QD=22.23;ReadPosRankSum=-0.193;VQSLOD=4.0881;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:16,48:56:10.13:1029,10,0	0/0:6,0:6:18.06:0,18,259	0/0:25,0:6:18.02:0,18,214	0/0:22,0:6:14.16:0,14,162	1/1:0,19:19:42.13:520,42,0	0/0:20,0:20:57.16:0,57,784	0/0:30,0:30:84.27:0,84,1192	0/0:24,0:21:63.20:0,63,889	0/0:23,0:23:69.23:0,69,994	0/0:21,0:20:60.20:0,60,864	0/0:30,0:30:78.26:0,78,1121	0/0:36,0:35:90.29:0,90,1277	0/0:35,0:35:93.23:0,93,1303	0/0:27,0:27:69.22:0,69,976	0/0:40,0:40:99:0,111,1580	0/0:27,0:27:75.24:0,75,1061	0/0:27,0:27:75.24:0,75,1060	0/0:17,0:17:48.16:0,48,686	0/1:14,13:14:50.27:336,0,50	1/1:1,21:21:60.19:743,60,0	1/1:20,66:80:99:2111,102,0	0/0:30,0:29:66.22:0,66,949	0/0:25,0:25:63.19:0,63,862	0/0:36,0:36:96.26:0,96,1325	0/0:29,0:29:84.28:0,84,1210	0/1:9,21:23:69.37:571,0,69	1/1:1,20:21:51.16:632,51,0	1/1:4,11:15:30.09:372,30,0
chr10	44776754	.	GAAA	G	5682.33	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=16.482;DP=638;FS=7.055;HRun=5;HaplotypeScore=152.0415;InbreedingCoeff=0.9779;MQ=68.48;MQ0=0;MQRankSum=-11.414;QD=30.39;ReadPosRankSum=0.608;VQSLOD=1.9283;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,15:19:36.05:512,36,0	0/0:6,0:6:18.06:0,18,378	0/0:23,0:22:53.28:0,53,1084	0/0:24,0:23:59.54:0,60,1037	1/1:2,30:32:65.48:941,65,0	0/0:30,0:30:84.27:0,84,1849	0/0:16,0:16:48.16:0,48,1030	0/0:27,0:26:78.21:0,78,1629	0/0:22,0:22:66.21:0,66,1420	0/0:24,0:24:72.23:0,72,1514	0/0:29,0:29:78.26:0,78,1705	0/0:17,0:17:51.18:0,51,1142	0/0:21,0:21:63.21:0,63,1405	0/0:33,0:33:99:0,99,2082	0/0:30,0:30:81.26:0,81,1748	0/0:28,0:28:84.27:0,84,1834	0/0:17,0:17:48.16:0,48,1057	0/0:21,1:22:14.43:0,14,1161	1/1:10,15:25:50.98:714,51,0	1/1:5,28:33:81.25:1216,81,0	1/1:4,7:11:6:80,6,0	0/0:17,0:17:45.15:0,45,996	0/0:26,0:26:75.25:0,75,1653	0/0:22,0:22:63.21:0,63,1389	0/0:17,0:17:51.17:0,51,1118	1/1:3,19:22:48.11:653,48,0	1/1:5,24:29:72.11:1036,72,0	1/1:2,14:16:36.12:530,36,0
chr10	44777465	.	ATGTATGTGTGTG	A	5202	PASS	AB=0.864;AC=13;AF=0.232;AN=56;BaseQRankSum=11.044;DP=785;FS=3.538;HRun=0;HaplotypeScore=318.9435;InbreedingCoeff=0.7366;MQ=54.18;MQ0=12;MQRankSum=-7.789;QD=27.97;ReadPosRankSum=-0.398;VQSLOD=3.2366;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,10:31:8.07:223,8,0	0/0:15,0:15:42.10:0,42,1684	0/0:28,0:23:49.67:0,50,1354	0/0:22,0:19:49.04:0,49,1110	1/1:18,13:32:32.63:649,33,0	0/0:38,0:38:93.31:0,93,4663	0/0:23,0:23:60.17:0,60,2413	0/0:39,0:35:96.31:0,96,2716	0/0:32,0:32:87.27:0,87,4357	0/0:35,0:34:98.69:0,99,4513	0/0:36,0:36:99:0,108,4058	0/0:18,0:18:45.14:0,45,1784	0/0:39,0:39:99:0,112,4183	0/0:28,0:28:67.78:0,68,2935	0/0:37,0:37:99:0,102,4803	0/0:27,0:27:81.28:0,81,3999	0/0:23,0:22:40.23:0,40,1083	0/0:26,0:26:56.60:0,57,2677	0/1:13,3:13:26.70:646,0,27	1/1:15,17:31:24.07:772,24,0	0/1:8,0:13:0:0,0,0	0/0:44,0:44:99:0,117,4367	0/0:26,0:25:73.67:0,74,2275	0/0:31,0:29:63.16:0,63,2205	0/0:32,0:32:90.27:0,90,3630	0/1:16,9:26:99:1529,0,225	1/1:12,13:27:42.14:1133,42,0	1/1:3,3:7:9.03:248,9,0
chr10	44777471	.	G	GTA	830.31	PASS	AB=0.893;AC=9;AF=0.161;AN=56;BaseQRankSum=4.691;DP=772;FS=1.705;HRun=0;HaplotypeScore=202.8881;InbreedingCoeff=-0.0591;MQ=52.66;MQ0=13;MQRankSum=-0.790;QD=4.01;ReadPosRankSum=-5.272;VQSLOD=1.5219;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:29,5:34:3.27:59,0,3	0/1:14,0:14:10.05:10,0,132	0/0:21,0:16:42.06:0,42,505	0/0:17,0:14:38.19:0,38,392	0/1:26,5:30:10.59:155,0,11	0/0:40,0:39:99:0,99,1409	0/0:20,0:20:57.15:0,57,799	0/0:39,0:34:95.79:0,96,1251	0/0:28,0:28:81.23:0,81,1171	0/0:36,0:35:99:0,99,1448	0/0:37,0:37:99:0,105,1397	0/1:19,0:19:26.58:27,0,144	0/0:41,0:41:48.02:0,48,482	0/0:26,0:26:0.88:0,1,239	0/0:36,0:36:99:0,102,1439	0/0:28,0:28:84.25:0,84,1234	0/0:29,0:28:8.54:0,9,190	0/0:26,0:26:38.04:0,38,833	0/1:14,1:12:81.06:98,0,81	0/1:26,4:29:42.40:51,0,42	0/1:8,6:14:0:0,0,0	0/0:44,0:44:89.46:0,89,505	0/0:25,0:24:0.29:0,0,235	0/0:34,0:32:14.31:0,14,235	0/0:31,0:31:87.25:0,87,1251	0/1:24,3:26:99:402,0,184	0/1:20,3:23:69.85:159,0,70	0/0:6,1:7:8.44:0,8,44
chr10	44777493	.	ATG	A	2755.93	PASS	AB=0.577;AC=17;AF=0.304;AN=56;BaseQRankSum=13.061;DP=796;FS=19.250;HRun=0;HaplotypeScore=194.9597;InbreedingCoeff=0.8277;MQ=52.80;MQ0=15;MQRankSum=-6.758;QD=11.98;ReadPosRankSum=0.327;VQSLOD=2.1122;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,26:40:5.06:77,5,0	0/0:16,0:16:45.15:0,45,720	0/0:9,0:6:15.05:0,15,229	0/0:16,0:11:30.08:0,30,436	1/1:5,24:25:14.75:194,15,0	0/0:49,0:48:99:0,117,1917	0/0:23,0:23:60.14:0,60,856	0/0:58,0:53:99:0,138,2151	0/0:27,0:27:75.24:0,75,1216	0/0:44,0:42:99:0,112,1781	0/0:29,0:29:72.25:0,72,1176	0/0:20,0:20:51.17:0,51,817	0/0:41,0:41:99:0,108,1730	0/0:27,0:27:78.21:0,78,1211	0/0:29,0:29:84.27:0,84,1376	0/0:28,0:28:78.27:0,78,1288	1/1:4,28:30:57.12:741,57,0	0/0:21,1:22:6.77:0,7,587	0/1:4,11:13:18.03:330,0,18	1/1:7,26:29:21.07:272,21,0	1/1:6,15:17:5.89:78,6,0	0/0:42,0:42:99:0,117,1858	0/0:28,0:28:78.11:0,78,1125	0/0:31,0:30:66.09:0,66,1053	0/0:27,0:27:66.21:0,66,1096	1/1:6,19:23:5.62:559,6,0	1/1:5,26:29:45.15:583,45,0	1/1:1,3:4:9.03:117,9,0
chr10	44778267	.	CCTT	C	1347.92	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=1.414;DP=716;FS=2.443;HRun=0;HaplotypeScore=114.0839;InbreedingCoeff=0.8173;MQ=54.54;MQ0=25;MQRankSum=1.595;QD=33.70;ReadPosRankSum=3.826;VQSLOD=4.2686;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:39:99:0,105,2283	0/0:13,0:13:36.12:0,36,799	0/0:9,0:2:5.99:0,6,70	0/0:8,0:4:5.61:0,6,51	0/0:27,0:27:63.02:0,63,1391	0/0:29,0:29:84.29:0,84,1791	0/0:34,0:31:77.92:0,78,1671	0/0:30,0:14:42.14:0,42,819	0/0:34,0:33:93.32:0,93,2053	0/0:35,0:32:90.31:0,90,1941	0/0:12,0:12:33.11:0,33,729	0/0:37,0:37:99:0,102,2260	0/0:31,0:31:90.29:0,90,1921	0/0:32,0:32:90.31:0,90,1950	0/0:27,0:27:75.26:0,75,1648	0/0:22,0:22:60.21:0,60,1327	1/1:1,39:40:86.93:1443,87,0	0/0:21,0:21:54.14:0,54,1165	0/0:19,0:10:27.09:0,27,606	0/0:25,0:25:66.22:0,66,1355	0/0:45,0:43:99:0,114,2422	0/0:22,0:22:60.21:0,60,1303	0/0:20,0:19:45.15:0,45,958	0/0:35,0:35:99:0,99,2155	0/0:21,0:21:53.77:0,54,1188	0/0:18,0:16:45.15:0,45,1009	0/0:21,0:21:60.21:0,60,1330	0/0:8,0:8:24.08:0,24,526
chr10	44778728	.	T	TA	8673.79	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-14.607;DP=746;FS=6.310;HRun=1;HaplotypeScore=66.1368;InbreedingCoeff=0.9999;MQ=62.61;MQ0=4;MQRankSum=4.245;QD=40.91;ReadPosRankSum=2.641;VQSLOD=5.5078;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,36:36:93.32:1394,93,0	0/0:12,0:12:36.10:0,36,452	0/0:27,0:12:29.92:0,30,356	0/0:31,0:18:42.14:0,42,545	1/1:1,23:24:57.19:854,57,0	0/0:27,0:27:78.25:0,78,1013	0/0:30,0:30:87.27:0,87,1116	0/0:26,0:26:72.22:0,72,921	0/0:21,0:21:60.18:0,60,765	0/0:38,0:38:99:0,111,1441	0/0:22,0:21:63.19:0,63,803	0/0:37,0:37:99:0,105,1332	0/0:22,0:22:66.21:0,66,857	0/0:20,0:20:57.17:0,57,725	0/0:21,0:21:60.19:0,60,778	0/0:28,0:28:84.26:0,84,1075	0/0:40,0:40:99:0,117,1518	0/0:24,0:24:72.21:0,72,917	1/1:1,22:21:60.20:898,60,0	1/1:0,34:34:99:1458,99,0	1/1:0,18:18:54.18:809,54,0	0/0:26,0:26:72.23:0,72,935	0/0:36,0:36:93.23:0,93,1175	0/0:20,0:20:60.15:0,60,760	0/0:26,0:26:75.23:0,75,958	1/1:0,32:32:96.30:1417,96,0	1/1:0,31:31:87.29:1304,87,0	1/1:0,14:14:36.12:539,36,0
chr10	44779909	.	GCATTAGAGGAAAAAAAT	G	10293.68	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=13.851;DP=649;FS=0.000;HRun=0;HaplotypeScore=284.1841;InbreedingCoeff=0.9833;MQ=56.01;MQ0=3;MQRankSum=-12.545;QD=72.49;ReadPosRankSum=0.903;VQSLOD=3.7501;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,28:31:42.14:2033,42,0	0/0:13,0:13:39.11:0,39,2697	0/0:28,0:17:51.17:0,51,2699	0/0:25,0:19:54.16:0,54,2556	1/1:4,19:20:40.71:1838,41,0	0/0:28,0:28:78.27:0,78,6232	0/0:24,0:23:72.23:0,72,4697	0/0:29,0:29:87.28:0,87,5531	0/0:15,0:15:45.15:0,45,3630	0/0:29,0:29:87.30:0,87,6271	0/0:17,0:17:51.18:0,51,3602	0/0:37,0:36:99:0,105,7849	0/0:29,0:29:84.29:0,84,6629	0/0:25,0:25:75.26:0,75,5729	0/0:32,0:32:96.31:0,96,7470	0/0:25,0:25:75.23:0,75,5298	0/0:30,0:30:87.30:0,87,6643	0/0:27,0:27:75.24:0,75,5592	1/1:3,7:9:18.01:772,18,0	1/1:2,17:19:36.05:1545,36,0	1/1:7,11:18:12.04:602,12,0	0/0:22,0:22:66.23:0,66,5058	0/0:23,0:23:69.24:0,69,5343	0/0:29,0:29:87.30:0,87,6651	0/0:20,0:20:60.21:0,60,4352	1/1:3,17:17:42.07:1849,42,0	1/1:3,11:13:24.08:1204,24,0	1/1:2,3:5:9.03:452,9,0
chr10	44781299	.	A	AG	3166.38	PASS	AB=0.548;AC=15;AF=0.268;AN=56;BaseQRankSum=10.678;DP=608;FS=0.918;HRun=1;HaplotypeScore=74.6324;InbreedingCoeff=0.8912;MQ=57.70;MQ0=7;MQRankSum=-5.537;QD=20.83;ReadPosRankSum=1.333;VQSLOD=3.8357;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,22:24:47.99:661,48,0	0/0:7,0:7:15.05:0,15,194	0/0:14,0:13:39.07:0,39,451	0/0:21,0:18:51.12:0,51,630	1/1:0,18:12:8.71:107,9,0	0/0:27,0:27:72.17:0,72,913	0/0:17,0:17:51.14:0,51,633	0/0:31,0:31:93.28:0,93,1170	0/0:21,0:21:54.18:0,54,700	0/0:31,0:31:87.28:0,87,1114	0/0:33,0:33:87.21:0,87,1107	0/0:19,0:19:45.13:0,45,569	0/0:25,0:25:69.20:0,69,875	0/0:19,0:19:51.17:0,51,661	0/0:36,1:36:99:0,99,1257	0/0:31,0:31:84.26:0,84,1076	0/0:23,0:23:66.21:0,66,856	0/0:18,1:18:54.11:0,54,653	1/1:2,11:11:27.09:395,27,0	1/1:0,24:23:60.01:805,60,0	1/1:0,11:11:27.09:403,27,0	0/0:23,1:23:41.71:0,42,523	0/0:18,0:16:30.10:0,30,389	0/0:18,0:18:54.14:0,54,670	0/0:21,0:21:54.16:0,54,687	0/1:4,18:16:71.74:435,0,72	1/1:3,22:14:23.76:332,24,0	1/1:0,12:11:15.05:225,15,0
chr10	44781887	.	AT	A	7164.24	PASS	AB=0.523;AC=31;AF=0.554;AN=56;BaseQRankSum=13.546;DP=589;FS=1.946;HRun=7;HaplotypeScore=58.7924;InbreedingCoeff=0.9200;MQ=64.61;MQ0=8;MQRankSum=-2.376;QD=21.78;ReadPosRankSum=4.476;VQSLOD=4.5144;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,18:20:30.06:306,30,0	1/1:0,18:17:45.10:459,45,0	0/0:12,0:10:30.09:0,30,357	0/0:20,0:17:45.13:0,45,529	1/1:3,36:31:54.12:551,54,0	0/0:15,0:15:36.10:0,36,440	0/0:15,0:15:42.13:0,42,528	0/0:30,0:30:81.25:0,81,1005	0/0:22,0:22:63.19:0,63,779	0/0:25,0:25:63.20:0,63,793	0/0:24,0:24:54.17:0,54,679	1/1:1,15:16:39.09:398,39,0	1/1:0,27:27:69.16:704,69,0	1/1:1,15:16:45.10:459,45,0	0/0:18,0:18:51.16:0,51,642	0/0:20,0:20:60.19:0,60,755	1/1:0,20:20:48.11:490,48,0	0/0:24,0:23:72.23:0,72,903	1/1:2,15:17:45.10:458,45,0	1/1:1,34:33:84.19:857,84,0	1/1:0,5:5:9.02:92,9,0	1/1:1,18:19:30.07:306,30,0	1/1:0,21:20:48.11:490,48,0	1/1:1,19:20:42.09:428,42,0	0/0:35,0:35:78.24:0,78,968	0/1:2,21:19:18.35:463,0,18	1/1:2,22:24:48.11:490,48,0	1/1:0,8:8:21.05:214,21,0
chr10	44783061	.	CA	C	8459.14	PASS	AB=0.543;AC=31;AF=0.554;AN=56;BaseQRankSum=13.209;DP=641;FS=2.160;HRun=7;HaplotypeScore=69.2412;InbreedingCoeff=0.9207;MQ=78.44;MQ0=2;MQRankSum=-4.635;QD=24.45;ReadPosRankSum=5.249;VQSLOD=5.1433;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,36:35:87.19:888,87,0	1/1:0,13:13:36.08:367,36,0	0/0:25,0:24:50.40:0,50,539	0/0:18,0:18:9.24:0,9,392	1/1:0,15:13:30.07:305,30,0	0/0:16,0:16:48.15:0,48,593	0/0:34,0:34:96.29:0,96,1194	0/0:33,0:33:90.28:0,90,1121	0/0:24,0:24:72.23:0,72,905	0/0:36,0:36:96.29:0,96,1194	0/0:19,0:19:54.13:0,54,658	1/1:1,31:31:75.17:765,75,0	1/1:1,20:21:60.14:612,60,0	1/1:2,26:27:66.15:673,66,0	0/0:24,0:24:72.22:0,72,894	0/0:23,0:23:63.20:0,63,793	1/1:1,19:19:48.11:490,48,0	0/0:22,0:22:60.15:0,60,736	1/1:2,12:12:30.04:293,30,0	1/1:2,16:17:45.10:459,45,0	1/1:1,29:29:72.16:734,72,0	1/1:1,18:20:54.12:550,54,0	1/1:4,20:23:54.12:548,54,0	1/1:1,21:22:57.13:581,57,0	0/0:21,0:21:57.18:0,57,716	0/1:4,21:24:15.36:490,0,15	1/1:1,19:20:51.11:519,51,0	1/1:0,7:7:18.04:184,18,0
chr10	44783508	.	TGGGGTTGGGGGCCCCTCAAGTTTTTTGGCCAGGCACC	T	8556.13	PASS	AC=10;AF=0.185;AN=54;BaseQRankSum=9.121;DP=584;FS=0.690;HRun=0;HaplotypeScore=491.0268;InbreedingCoeff=0.9438;MQ=58.01;MQ0=3;MQRankSum=-8.960;QD=63.38;ReadPosRankSum=5.975;VQSLOD=1.5044;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,102,11691	0/0:18,0:18:51.18:0,51,6471	0/0:13,0:9:24.08:0,24,1070	0/0:13,0:9:17.65:0,18,608	0/0:12,0:12:33.11:0,33,3677	0/0:19,0:19:57.18:0,57,7174	0/0:33,0:33:93.32:0,93,10943	0/0:23,0:22:57.20:0,57,4453	0/0:19,0:19:48.15:0,48,5708	0/0:12,0:12:36.12:0,36,4878	0/0:7,0:7:21.07:0,21,2671	1/1:11,26:37:21.07:1995,21,0	1/1:10,19:29:20.43:1993,20,0	1/1:9,23:32:36.12:3377,36,0	0/0:16,0:16:45.15:0,45,5041	0/0:9,0:9:27.09:0,27,4310	0/0:29,0:29:78.27:0,78,10946	0/0:36,0:35:96.33:0,96,12738	0/0:14,0:13:33.11:0,33,2829	0/0:16,0:16:45.15:0,45,5754	0/0:31,0:31:81.26:0,81,7836	./.	1/1:2,10:12:3.01:239,3,0	1/1:12,13:25:11.93:952,12,0	0/0:24,0:24:69.24:0,69,7772	0/0:19,0:19:51.18:0,51,5829	0/0:25,0:22:63.22:0,63,8089	0/0:11,0:11:27.09:0,27,2594
chr10	44784675	.	AT	A	5130.69	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=2.949;DP=732;FS=2.121;HRun=3;HaplotypeScore=73.4264;InbreedingCoeff=0.9525;MQ=53.07;MQ0=63;MQRankSum=5.421;QD=27.58;ReadPosRankSum=2.759;VQSLOD=4.2534;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:65,0:52:84.22:0,84,1153	1/1:0,8:8:21.07:260,21,0	0/0:19,0:1:3.01:0,3,36	0/0:18,0:3:6.02:0,6,86	0/0:39,0:36:53.85:0,54,752	0/0:23,0:20:51.17:0,51,734	0/0:26,0:26:60.14:0,60,788	0/0:41,0:32:93.30:0,93,1304	0/0:21,0:18:51.17:0,51,734	0/0:22,0:22:66.22:0,66,950	0/0:20,0:19:51.17:0,51,724	1/1:1,23:23:60.19:743,60,0	1/1:5,15:15:42.13:521,42,0	1/1:4,18:20:48.15:595,48,0	0/0:31,0:31:87.29:0,87,1251	0/0:11,0:9:24.08:0,24,346	1/1:6,35:38:81.25:1004,81,0	0/0:29,0:29:80.95:0,81,1120	0/0:27,0:12:36.11:0,36,502	0/0:27,0:21:48.16:0,48,682	0/0:33,0:15:33.11:0,33,474	1/1:2,25:26:60.19:743,60,0	1/1:1,19:20:54.17:669,54,0	1/1:2,22:22:47.86:595,48,0	0/0:17,0:17:51.16:0,51,718	0/0:25,0:15:45.15:0,45,648	0/0:41,0:31:69.06:0,69,934	0/0:11,0:8:21.07:0,21,302
chr10	44785706	.	A	AAAGT	9262.88	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=14.448;DP=560;FS=6.002;HRun=0;HaplotypeScore=106.0870;InbreedingCoeff=0.9986;MQ=75.30;MQ0=0;MQRankSum=-14.554;QD=57.18;ReadPosRankSum=-3.775;VQSLOD=5.3369;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,11:14:33.07:807,33,0	0/0:11,0:11:33.11:0,33,616	0/0:16,0:16:39.13:0,39,724	0/0:16,0:16:38.86:0,39,638	1/1:8,27:32:69.24:1692,69,0	0/0:29,0:29:84.25:0,84,1489	0/0:13,0:13:33.10:0,33,584	0/0:30,0:30:81.28:0,81,1500	0/0:13,0:13:36.12:0,36,672	0/0:26,0:26:72.24:0,72,1307	0/0:21,0:21:57.20:0,57,1064	0/0:28,0:28:78.25:0,78,1425	0/0:23,0:23:60.21:0,60,1120	0/0:14,0:14:36.12:0,36,672	0/0:26,0:26:72.23:0,72,1313	0/0:20,0:20:54.19:0,54,1008	0/0:16,0:16:45.13:0,45,796	0/0:9,0:9:27.09:0,27,503	1/1:5,14:21:51.16:1269,51,0	1/1:8,24:30:72.25:1821,72,0	1/1:1,8:10:21.03:446,21,0	0/0:20,0:20:48.16:0,48,882	0/0:28,0:28:69.03:0,69,1287	0/0:18,0:18:54.17:0,54,977	0/0:21,0:21:51.14:0,51,889	1/1:4,21:25:69.24:1752,69,0	1/1:2,12:14:33.11:864,33,0	1/1:1,7:8:24.08:613,24,0
chr10	44785866	.	T	TC	1439.11	PASS	AB=1.000;AC=27;AF=0.482;AN=56;BaseQRankSum=7.818;DP=510;FS=5.990;HRun=2;HaplotypeScore=73.9711;InbreedingCoeff=0.6858;MQ=70.96;MQ0=0;MQRankSum=0.047;QD=5.69;ReadPosRankSum=-0.009;VQSLOD=0.4686;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:15,0:15:12.59:44,0,13	1/1:12,0:12:29.56:188,30,0	0/0:21,0:20:35.50:0,35,394	0/0:23,0:20:14.62:0,15,337	1/1:15,0:15:17.05:194,17,0	0/0:23,0:23:63.14:0,63,717	0/0:14,0:14:35.61:0,36,385	0/0:27,0:27:71.07:0,71,771	0/0:12,0:12:33.08:0,33,383	0/0:26,0:26:75.13:0,75,820	0/0:17,0:17:48.02:0,48,481	1/1:26,0:26:29.72:181,30,0	0/1:21,0:21:4.29:46,0,4	1/1:18,0:18:0.99:55,1,0	0/0:21,0:21:60.16:0,60,705	0/0:26,0:26:75.21:0,75,899	1/1:25,1:26:11.10:50,11,0	0/0:13,0:13:39.05:0,39,436	1/1:13,0:13:32.69:242,33,0	1/1:21,0:21:10.07:146,10,0	0/0:5,8:12:0:0,0,0	1/1:14,0:14:4.58:36,5,0	0/1:23,0:23:8.84:31,0,9	1/1:11,0:10:6.43:36,6,0	0/0:21,0:21:54.13:0,54,627	1/1:15,0:15:29.80:253,30,0	1/1:14,0:13:12.02:113,12,0	1/1:9,0:9:3:29,3,0
chr10	44785868	.	CT	C	158.61	PASS	AB=0.895;AC=3;AF=0.054;AN=56;BaseQRankSum=1.389;DP=558;FS=2.695;HRun=11;HaplotypeScore=110.6071;InbreedingCoeff=0.4253;MQ=69.28;MQ0=0;MQRankSum=0.953;QD=5.47;ReadPosRankSum=1.381;VQSLOD=2.0265;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:19:18.83:0,19,86	1/1:0,12:12:29.97:246,30,0	0/0:20,1:20:29.65:0,30,268	0/0:23,0:21:0.14:0,0,233	0/0:5,0:21:32.03:0,32,162	0/0:22,1:23:29.48:0,29,511	0/0:13,1:15:7.70:0,8,256	0/0:27,1:28:57.10:0,57,590	0/0:10,1:11:5.43:0,5,263	0/0:24,1:26:22.50:0,22,472	0/1:15,2:17:16.21:16,0,255	0/0:26,0:26:55.41:0,55,360	0/0:21,0:21:58.66:0,59,365	0/0:18,0:18:46.72:0,47,280	0/0:21,0:21:58.01:0,58,597	0/0:25,1:26:50.54:0,51,742	0/0:26,0:26:34.85:0,35,361	0/0:14,0:14:42.06:0,42,426	0/0:4,0:19:24.63:0,25,123	0/0:6,0:36:41.24:0,41,213	0/0:14,0:13:16.24:0,16,86	0/0:14,0:14:38.11:0,38,231	0/0:22,0:22:61.66:0,62,384	0/0:11,0:10:23.40:0,23,138	0/0:19,2:21:7.85:0,8,487	0/0:8,0:24:37.44:0,37,203	0/0:3,0:18:17.06:0,17,86	0/0:1,0:10:5.67:0,6,28
chr10	44786040	.	GA	G	892.59	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.563;DP=646;FS=0.000;HRun=5;HaplotypeScore=79.0089;InbreedingCoeff=0.9752;MQ=61.89;MQ0=0;MQRankSum=2.242;QD=29.75;ReadPosRankSum=-5.358;VQSLOD=1.2598;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:57.44:0,57,435	0/0:12,0:12:33.10:0,33,436	0/0:16,0:14:30.09:0,30,389	0/0:12,0:12:24.08:0,24,311	0/0:35,0:35:80.29:0,80,537	0/0:21,0:21:63.19:0,63,831	0/0:13,0:13:39.11:0,39,516	1/1:0,30:30:90.20:987,90,0	0/0:25,0:25:75.23:0,75,1008	0/0:28,0:28:81.26:0,81,1081	0/0:42,0:42:99:0,120,1575	0/0:25,0:25:75.24:0,75,1012	0/0:29,0:29:84.25:0,84,1115	0/0:26,0:26:75.24:0,75,1003	0/0:25,0:25:72.23:0,72,970	0/0:23,0:23:66.22:0,66,902	0/0:19,0:19:54.14:0,54,687	0/0:19,0:19:54.14:0,54,717	0/0:18,0:17:22.07:0,22,220	0/0:28,0:28:73.47:0,73,478	0/0:10,0:10:26.23:0,26,149	0/0:14,0:14:42.13:0,42,560	0/0:30,0:30:90.29:0,90,1216	0/0:9,0:9:27.09:0,27,369	0/0:31,0:31:90.29:0,90,1214	0/0:25,0:25:14.81:0,15,340	0/0:35,0:34:89.14:0,89,576	0/0:18,0:18:30.04:0,30,274
chr10	44786543	.	T	TAA	2271.19	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=9.255;DP=496;FS=2.733;HRun=10;HaplotypeScore=91.3203;InbreedingCoeff=0.8930;MQ=66.18;MQ0=0;MQRankSum=-9.780;QD=13.60;ReadPosRankSum=-2.232;VQSLOD=1.8425;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:10,0:9:9.01:83,9,0	0/0:5,0:5:9.01:0,9,92	0/1:13,0:13:6.39:6,0,108	0/0:13,0:10:17.66:0,18,161	1/1:19,0:19:33.03:311,33,0	0/0:16,0:16:45.08:0,45,458	0/0:11,0:11:33.07:0,33,335	0/0:25,0:25:57.02:0,57,573	0/0:14,0:14:30.06:0,30,305	0/0:22,0:22:54.07:0,54,536	0/0:19,0:19:48.06:0,48,487	0/0:26,0:26:69.07:0,69,683	0/0:21,0:21:42.05:0,42,427	0/0:27,0:27:72.12:0,72,717	0/0:26,0:26:66.11:0,66,665	0/0:23,0:23:53.83:0,54,530	1/1:2,14:18:41.11:556,41,0	0/0:16,0:16:39.01:0,39,387	1/1:16,0:15:23.75:204,24,0	1/1:27,0:27:40.87:387,41,0	1/1:10,0:9:5.97:48,6,0	0/0:20,0:20:51.06:0,51,511	0/0:8,0:9:20.73:0,21,184	0/0:6,0:6:12.01:0,12,122	0/0:29,0:30:80.88:0,81,805	1/1:15,0:15:27.03:268,27,0	1/1:19,0:18:36.03:335,36,0	1/1:18,0:18:31.28:282,31,0
chr10	44786548	.	A	AAAAAAAAGAAG	11825.64	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=7.426;DP=478;FS=1.972;HRun=0;HaplotypeScore=151.5874;InbreedingCoeff=0.9110;MQ=69.57;MQ0=0;MQRankSum=-12.756;QD=86.32;ReadPosRankSum=-1.184;VQSLOD=4.2717;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,0:9:18.06:809,18,0	0/0:4,0:4:9.02:0,9,288	0/1:14,0:12:4.98:5,0,439	0/0:13,0:10:23.88:0,24,539	1/1:19,0:19:39.13:1753,39,0	0/0:17,0:17:45.13:0,45,1388	0/0:11,0:11:33.11:0,33,1039	0/0:27,0:27:66.16:0,66,1824	0/0:11,0:11:30.10:0,30,919	0/0:24,0:24:63.15:0,63,1626	0/0:19,0:19:57.19:0,57,1629	0/0:26,0:26:75.22:0,75,2115	0/0:21,0:21:51.14:0,51,1437	0/0:27,0:27:78.21:0,78,2219	0/0:24,0:24:69.20:0,69,2011	0/0:20,0:20:57.16:0,57,1593	0/0:17,0:17:40.67:0,41,528	0/0:16,0:16:48.15:0,48,1321	1/1:11,0:10:24.05:1024,24,0	1/1:23,0:23:63.17:2474,63,0	1/1:4,3:11:8.99:423,9,0	0/0:19,0:19:57.16:0,57,1591	0/0:9,0:9:21.06:0,21,629	0/0:7,0:7:15:0,15,403	0/0:29,0:29:84.28:0,84,2542	1/1:14,0:14:39.13:1715,39,0	1/1:17,1:17:42.62:1955,43,0	1/1:18,0:18:37.37:1669,37,0
chr10	44786551	.	A	AAAAAGAAGAAG	14286.74	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-2.877;DP=505;FS=1.829;HRun=0;HaplotypeScore=151.0785;InbreedingCoeff=0.9460;MQ=67.52;MQ0=0;MQRankSum=-13.156;QD=93.38;ReadPosRankSum=-2.620;VQSLOD=4.6239;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,2:9:18.06:900,18,0	0/0:4,0:4:9.02:0,9,296	0/0:13,0:11:1.73:0,2,511	0/0:15,0:12:29.64:0,30,627	1/1:3,11:22:39.13:1925,39,0	0/0:17,0:17:48.13:0,48,1464	0/0:11,0:11:33.11:0,33,1073	0/0:28,0:28:75.17:0,75,2036	0/0:11,0:11:33.10:0,33,967	0/0:22,0:22:63.19:0,63,1753	0/0:19,0:19:57.20:0,57,1771	0/0:25,0:25:75.23:0,75,2253	0/0:20,0:20:54.17:0,54,1580	0/0:26,0:26:78.22:0,78,2333	0/0:25,0:25:72.19:0,72,2112	0/0:20,0:20:57.17:0,57,1699	0/0:16,0:16:40.68:0,41,572	0/0:17,0:17:48.16:0,48,1448	1/1:3,8:19:48.12:1783,48,0	1/1:8,11:28:63.17:2741,63,0	1/1:4,1:5:12.02:499,12,0	0/0:20,0:20:60.17:0,60,1712	0/0:7,0:7:21.07:0,21,645	0/0:7,0:7:15.04:0,15,441	0/0:29,0:29:84.28:0,84,2656	1/1:4,8:22:60.19:2430,60,0	1/1:4,11:26:42.14:2124,42,0	1/1:3,7:19:37.37:1884,37,0
chr10	44787349	.	A	AATG	8770.15	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=15.087;DP=514;FS=8.961;HRun=0;HaplotypeScore=87.3708;InbreedingCoeff=0.9945;MQ=67.30;MQ0=0;MQRankSum=-3.841;QD=51.59;ReadPosRankSum=2.256;VQSLOD=7.1855;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,10:13:27.09:603,27,0	0/0:8,0:8:21.07:0,21,351	0/0:11,0:11:27.09:0,27,444	0/0:9,0:8:15.04:0,15,210	1/1:3,29:33:84.11:1724,84,0	0/0:18,0:18:54.16:0,54,861	0/0:9,0:9:27.09:0,27,455	0/0:32,0:32:81.23:0,81,1258	0/0:11,0:11:30.09:0,30,484	0/0:30,0:30:84.24:0,84,1290	0/0:22,0:22:66.20:0,66,1069	0/0:12,0:12:36.09:0,36,535	0/0:20,0:20:57.19:0,57,967	0/0:18,0:18:54.17:0,54,889	0/0:11,0:11:30.10:0,30,484	0/0:22,0:22:60.17:0,60,943	0/0:26,0:26:78.13:0,78,1159	0/0:16,0:15:45.13:0,45,732	1/1:4,16:19:45.03:894,45,0	1/1:2,30:34:81.07:1569,81,0	1/1:0,14:14:33.11:744,33,0	0/0:10,0:10:30.08:0,30,454	0/0:20,0:20:54.13:0,54,833	0/0:7,0:7:17.98:0,18,244	0/0:32,0:32:93.27:0,93,1502	1/1:1,12:14:42.08:812,42,0	1/1:2,25:27:66.21:1472,66,0	1/1:0,15:15:42.14:952,42,0
chr10	44787526	.	TCA	T	10089.65	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=14.358;DP=703;FS=12.084;HRun=0;HaplotypeScore=98.1460;InbreedingCoeff=0.9942;MQ=61.62;MQ0=6;MQRankSum=0.722;QD=44.45;ReadPosRankSum=1.951;VQSLOD=5.9105;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,47:47:99:2247,138,0	0/0:13,0:13:39.13:0,39,791	0/0:21,0:9:27.07:0,27,469	0/0:16,0:10:27.08:0,27,491	1/1:0,25:25:66.23:1076,66,0	0/0:27,0:27:81.26:0,81,1597	0/0:22,0:22:66.21:0,66,1291	0/0:22,0:22:63.22:0,63,1269	0/0:36,0:36:99:0,108,2158	0/0:27,0:27:81.27:0,81,1598	0/0:25,0:25:75.26:0,75,1523	0/0:25,0:25:75.26:0,75,1524	0/0:23,0:23:69.24:0,69,1389	0/0:32,0:32:96.32:0,96,1899	0/0:32,0:32:96.33:0,96,1949	0/0:32,0:32:96.32:0,96,1903	0/0:36,0:36:99:0,108,2120	0/0:19,0:19:57.20:0,57,1158	1/1:2,19:19:54.10:750,54,0	1/1:0,22:22:60.15:961,60,0	1/1:0,62:62:99:2885,178,0	0/0:13,0:13:39.13:0,39,792	0/0:17,0:17:48.16:0,48,924	0/0:23,0:23:66.23:0,66,1330	0/0:15,0:15:45.15:0,45,914	1/1:1,24:25:24.68:1095,25,0	1/1:0,20:20:54.18:880,54,0	1/1:0,5:5:12.04:196,12,0
chr10	44788441	.	T	TA	5322.10	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=2.241;DP=614;FS=1.554;HRun=8;HaplotypeScore=60.4279;InbreedingCoeff=0.9888;MQ=62.73;MQ0=0;MQRankSum=1.806;QD=28.31;ReadPosRankSum=4.880;VQSLOD=4.9315;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,24:26:60.18:692,60,0	0/0:12,0:12:33.02:0,33,302	0/0:13,0:12:27.01:0,27,246	0/0:19,0:16:34.30:0,34,286	1/1:4,30:34:87.26:1004,87,0	0/0:24,0:24:63.03:0,63,577	0/0:13,0:13:33:0,33,297	0/0:31,0:30:81.02:0,81,741	0/0:21,0:21:54.01:0,54,490	0/0:40,0:40:93.02:0,93,849	0/0:31,0:31:93.05:0,93,851	0/0:16,0:16:45:0,45,407	0/0:17,0:17:39.02:0,39,357	0/0:24,0:24:66.02:0,66,600	0/0:25,0:25:69.02:0,69,627	0/0:16,0:16:39.01:0,39,357	0/0:15,0:14:42:0,42,379	0/0:21,0:21:60.01:0,60,544	1/1:2,16:17:48.09:538,48,0	1/1:3,42:45:99:1385,120,0	1/1:0,5:5:12.04:138,12,0	0/0:24,0:24:60.01:0,60,545	0/0:29,0:29:72.03:0,72,659	0/0:13,0:13:39.02:0,39,357	0/0:22,0:22:63.02:0,63,572	1/1:5,12:17:11.65:388,12,0	1/1:6,24:30:72.21:830,72,0	1/1:1,10:11:30.09:346,30,0
chr10	44788521	.	ACTT	A	709.91	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.641;DP=615;FS=0.964;HRun=0;HaplotypeScore=101.7965;InbreedingCoeff=0.9949;MQ=70.40;MQ0=0;MQRankSum=-4.716;QD=35.50;ReadPosRankSum=-3.054;VQSLOD=3.5690;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:69.24:0,69,1701	0/0:10,0:10:30.10:0,30,721	0/0:18,0:18:54.19:0,54,1266	0/0:7,0:7:21.07:0,21,474	0/0:17,0:17:48.14:0,48,1132	0/0:23,0:23:69.22:0,69,1651	0/0:12,0:12:36.12:0,36,887	1/1:0,20:16:48.15:805,48,0	0/0:21,0:21:63.22:0,63,1552	0/0:37,0:37:99:0,111,2689	0/0:34,0:34:99:0,102,2454	0/0:23,0:23:69.24:0,69,1700	0/0:19,0:19:57.20:0,57,1377	0/0:24,0:24:72.25:0,72,1775	0/0:33,0:33:99:0,99,2417	0/0:20,0:20:60.21:0,60,1479	0/0:18,0:18:54.19:0,54,1331	0/0:18,0:18:51.18:0,51,1257	0/0:25,0:25:69.23:0,69,1654	0/0:32,0:32:93.32:0,93,2290	0/0:14,0:14:42.14:0,42,1032	0/0:21,0:21:63.20:0,63,1502	0/0:33,0:33:99:0,99,2428	0/0:12,0:12:36.12:0,36,887	0/0:30,0:30:90.31:0,90,2219	0/0:26,0:26:78.27:0,78,1919	0/0:32,0:32:93.32:0,93,2289	0/0:11,0:11:33.09:0,33,761
chr10	44788526	.	AG	A	447.45	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.683;DP=614;FS=0.989;HRun=1;HaplotypeScore=76.2383;InbreedingCoeff=0.9952;MQ=70.35;MQ0=0;MQRankSum=-5.734;QD=23.55;ReadPosRankSum=-3.010;VQSLOD=2.8509;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:72.25:0,72,1149	0/0:8,0:8:24.08:0,24,383	0/0:17,0:17:48.16:0,48,767	0/0:8,0:8:24.08:0,24,383	0/0:17,0:17:48.15:0,48,740	0/0:24,0:24:72.25:0,72,1149	0/0:13,0:13:39.12:0,39,601	1/1:2,17:15:43.69:542,44,0	0/0:20,0:20:60.20:0,60,959	0/0:34,0:34:99:0,102,1602	0/0:31,0:31:93.28:0,93,1436	0/0:25,0:25:75.26:0,75,1195	0/0:19,0:19:57.19:0,57,911	0/0:24,0:24:72.23:0,72,1126	0/0:32,0:32:96.33:0,96,1535	0/0:22,0:22:66.21:0,66,1031	0/0:21,0:21:63.21:0,63,1006	0/0:17,0:17:48.16:0,48,765	0/0:25,0:25:69.24:0,69,1103	0/0:32,0:32:93.32:0,93,1476	0/0:15,0:15:45.14:0,45,690	0/0:20,0:20:60.20:0,60,950	0/0:32,0:32:96.33:0,96,1530	0/0:12,0:12:36.12:0,36,575	0/0:30,0:30:90.31:0,90,1439	0/0:26,0:26:78.25:0,78,1223	0/0:35,0:35:99:0,102,1606	0/0:10,0:10:30.10:0,30,479
chr10	44788823	.	C	CA	10051.25	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-11.012;DP=799;FS=0.894;HRun=3;HaplotypeScore=191.4184;InbreedingCoeff=0.9970;MQ=62.48;MQ0=2;MQRankSum=1.473;QD=37.23;ReadPosRankSum=1.974;VQSLOD=3.8208;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,49:51:99:1928,141,0	0/0:17,0:17:51.16:0,51,609	0/0:28,0:28:81.19:0,81,934	0/0:10,0:10:26.99:0,27,295	1/1:3,31:34:90.26:1232,90,0	0/0:34,0:34:93.27:0,93,1103	0/0:28,0:28:81.19:0,81,944	0/0:25,0:25:60.18:0,60,720	0/0:31,0:31:90.28:0,90,1079	0/0:39,0:38:99:0,111,1331	0/0:28,0:28:81.25:0,81,972	0/0:27,0:27:75.23:0,75,896	0/0:19,0:19:57.16:0,57,670	0/0:27,0:27:78.22:0,78,918	0/0:48,0:48:99:0,138,1645	0/0:30,0:30:87.27:0,87,1044	0/0:28,0:28:69.20:0,69,810	0/0:12,0:12:36.11:0,36,432	1/1:0,35:33:96.30:1325,96,0	1/1:1,30:31:90.30:1260,90,0	1/1:2,36:38:99:1493,108,0	0/0:30,0:30:77.82:0,78,891	0/0:21,0:21:51.97:0,52,595	0/0:18,0:18:30.09:0,30,359	0/0:29,0:29:87.27:0,87,1044	1/1:8,29:37:30.32:1259,30,0	1/1:5,33:37:96.32:1344,96,0	1/1:0,5:5:15.05:210,15,0
chr10	44788836	.	GAGCCAA	G	7578.06	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=16.398;DP=734;FS=12.799;HRun=0;HaplotypeScore=274.2908;InbreedingCoeff=0.9990;MQ=70.55;MQ0=0;MQRankSum=-14.160;QD=64.22;ReadPosRankSum=4.767;VQSLOD=3.8612;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,147,4938	1/1:0,10:11:33.09:727,33,0	0/0:27,0:27:78.27:0,78,2730	0/0:18,0:18:51.17:0,51,1738	0/0:35,0:34:99:0,99,3237	0/0:32,0:32:96.33:0,96,3572	0/0:29,0:29:87.30:0,87,3182	0/0:28,0:28:84.28:0,84,3002	0/0:32,0:32:96.32:0,96,3458	0/0:38,0:37:99:0,108,3829	0/0:26,0:26:75.24:0,75,2702	1/1:0,19:19:57.20:1331,57,0	1/1:1,12:13:39.13:875,39,0	1/1:3,16:19:57.17:1227,57,0	0/0:44,0:44:99:0,132,4848	0/0:33,0:33:99:0,99,3700	1/1:0,12:12:36.10:793,36,0	0/0:12,0:12:36.12:0,36,1355	0/0:33,0:33:99:0,99,3423	0/0:36,0:36:99:0,105,3290	0/0:36,0:36:99:0,108,4018	1/1:1,21:22:66.22:1374,66,0	1/1:0,13:13:36.12:823,36,0	1/1:2,7:9:21.06:429,21,0	0/0:32,0:32:96.29:0,96,3508	0/0:30,0:30:90.31:0,90,3277	0/0:35,0:34:99:0,102,3789	0/0:9,0:9:27.01:0,27,773
chr10	44788845	.	GGAAAAAGATACA	G	12078.36	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=16.382;DP=734;FS=10.068;HRun=0;HaplotypeScore=355.7358;InbreedingCoeff=0.9984;MQ=71.90;MQ0=0;MQRankSum=-15.312;QD=107.84;ReadPosRankSum=6.520;VQSLOD=4.1050;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,135,7694	1/1:0,10:10:30.10:1124,30,0	0/0:29,0:29:81.28:0,81,4121	0/0:21,0:21:63.18:0,63,2983	0/0:37,0:36:99:0,105,6053	0/0:29,0:29:87.30:0,87,5181	0/0:33,0:33:99:0,99,5945	0/0:31,0:31:93.31:0,93,5233	0/0:28,0:28:84.27:0,84,4961	0/0:35,0:35:99:0,102,6119	0/0:29,0:29:84.29:0,84,5242	1/1:0,19:19:57.20:2127,57,0	1/1:1,12:13:39.13:1434,39,0	1/1:0,17:17:51.18:1893,51,0	0/0:44,0:44:99:0,132,7831	0/0:37,0:37:99:0,111,6475	1/1:0,12:12:36.12:1295,36,0	0/0:15,0:15:45.13:0,45,2450	0/0:29,0:29:87.30:0,87,4400	0/0:33,0:33:99:0,99,5249	0/0:35,0:35:99:0,102,5895	1/1:0,21:21:63.22:2211,63,0	1/1:0,13:13:38.96:1340,39,0	1/1:0,7:7:18.06:655,18,0	0/0:33,0:33:99:0,99,5866	0/0:30,0:30:90.31:0,90,5524	0/0:36,0:35:99:0,105,6042	0/0:9,0:9:27.09:0,27,1700
chr10	44790136	.	ATCTTTTTGTTG	A	9140.80	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=14.415;DP=739;FS=0.860;HRun=0;HaplotypeScore=232.7617;InbreedingCoeff=0.9674;MQ=53.09;MQ0=49;MQRankSum=-13.723;QD=60.94;ReadPosRankSum=3.362;VQSLOD=4.2522;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:78.26:0,78,3508	1/1:2,15:17:38.02:1324,38,0	0/0:30,0:3:9.03:0,9,233	0/0:21,0:2:6.02:0,6,324	0/0:43,0:42:99:0,114,5798	0/0:27,0:27:78.25:0,78,3807	0/0:13,0:11:33.10:0,33,1457	0/0:54,0:50:99:0,144,5410	0/0:26,0:26:69.24:0,69,3557	0/0:38,0:38:99:0,99,5080	0/0:29,0:29:63.15:0,63,3045	1/1:1,17:18:35.01:1202,35,0	1/1:0,19:19:45.15:1534,45,0	1/1:3,23:27:45.63:1537,46,0	0/0:36,0:36:99:0,105,5048	0/0:30,0:30:87.29:0,87,4506	0/0:20,0:20:57.20:0,57,3102	0/0:14,0:14:36.11:0,36,1830	0/0:18,0:15:39.05:0,39,1569	0/0:51,0:49:99:0,135,7090	0/0:27,0:26:72.21:0,72,3551	1/1:3,24:27:44.54:1480,45,0	1/1:2,22:24:46.70:1552,47,0	1/1:1,17:18:14.59:512,15,0	0/0:20,0:20:54.17:0,54,2671	0/0:29,0:27:81.24:0,81,4271	0/0:26,0:25:75.25:0,75,3756	0/0:11,0:11:33.08:0,33,1565
chr10	44790306	.	G	GA	11876.89	PASS	AB=0.868;AC=18;AF=0.321;AN=56;BaseQRankSum=5.933;DP=784;FS=11.956;HRun=0;HaplotypeScore=118.7287;InbreedingCoeff=0.8361;MQ=78.88;MQ0=0;MQRankSum=-1.083;QD=37.35;ReadPosRankSum=1.759;VQSLOD=3.3310;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,47:48:99:2157,135,0	0/0:11,0:11:33.11:0,33,461	0/1:22,2:25:59.03:59,0,780	0/1:22,5:26:99:117,0,711	1/1:0,27:27:72.25:1151,72,0	0/0:19,0:19:57.19:0,57,784	0/0:18,0:18:54.13:0,54,700	0/0:35,5:39:54.43:0,54,1273	0/0:29,0:29:87.27:0,87,1196	0/0:41,1:42:99:0,123,1718	0/0:27,1:28:75.25:0,75,1048	0/0:30,0:30:90.30:0,90,1255	0/0:16,0:16:48.07:0,48,645	0/0:25,0:25:75.05:0,75,971	0/0:43,0:43:99:0,129,1786	0/0:33,0:33:99:0,99,1366	0/0:21,0:21:62.24:0,62,843	0/0:12,0:12:33.11:0,33,456	1/1:0,29:29:78.23:1219,78,0	1/1:0,34:34:90.31:1438,90,0	1/1:0,58:57:99:2636,166,0	0/0:14,1:15:39.09:0,39,522	0/0:19,0:19:54.16:0,54,736	0/0:31,0:31:78.26:0,78,1090	0/0:34,0:34:99:0,102,1394	1/1:0,32:33:96.29:1472,96,0	1/1:0,27:27:72.24:1149,72,0	1/1:0,10:10:30.10:479,30,0
chr10	44790845	.	T	TA	19798.76	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=-8.318;DP=777;FS=0.267;HRun=0;HaplotypeScore=77.8109;InbreedingCoeff=0.9975;MQ=79.06;MQ0=0;MQRankSum=-3.092;QD=44.59;ReadPosRankSum=4.974;VQSLOD=4.8864;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,30:30:81.28:1294,81,0	1/1:0,8:8:24.08:384,24,0	0/0:29,0:28:84.25:0,84,1118	0/0:25,0:22:15.22:0,15,553	1/1:0,36:36:99:1678,105,0	0/0:25,0:25:69.23:0,69,965	0/0:36,0:36:99:0,108,1509	0/0:27,0:27:75.20:0,75,961	0/0:31,0:31:93.30:0,93,1284	0/0:27,0:27:81.27:0,81,1132	0/0:24,0:24:72.23:0,72,985	1/1:0,33:33:96.33:1534,96,0	1/1:1,31:32:90.31:1438,90,0	1/1:1,23:25:69.23:1093,69,0	0/0:33,0:33:99:0,99,1366	0/0:34,0:34:99:0,102,1409	1/1:1,14:15:33.11:527,33,0	0/0:12,0:12:33.11:0,33,459	1/1:1,16:16:45.15:719,45,0	1/1:1,32:33:90.31:1438,90,0	1/1:0,30:30:87.30:1391,87,0	1/1:0,37:37:99:1630,102,0	1/1:0,37:37:99:1630,102,0	1/1:0,30:30:84.29:1342,84,0	0/0:30,0:30:90.28:0,90,1236	1/1:1,33:34:60.38:1541,60,0	1/1:1,31:32:90.31:1438,90,0	1/1:0,15:15:45.15:719,45,0
chr10	44792404	.	TA	T	2195.26	PASS	AB=0.745;AC=18;AF=0.429;AN=42;BaseQRankSum=1.988;DP=329;FS=0.000;HRun=12;HaplotypeScore=49.7104;InbreedingCoeff=0.7346;MQ=70.89;MQ0=0;MQRankSum=1.125;QD=13.15;ReadPosRankSum=1.392;VQSLOD=3.5329;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	1/1:1,0:7:10.18:29,10,0	0/0:13,0:12:5.45:0,5,167	0/0:7,0:3:6.01:0,6,59	./.	0/0:24,1:25:31.18:0,31,447	0/0:9,0:9:23.98:0,24,231	1/1:10,30:40:89.59:690,90,0	0/0:22,1:23:26.86:0,27,429	1/1:2,9:11:26.88:209,27,0	1/1:2,16:19:46.83:354,47,0	0/0:16,1:17:24.83:0,25,420	0/0:15,1:16:21.81:0,22,390	0/0:12,0:12:33.05:0,33,327	1/1:2,13:16:37.88:284,38,0	0/1:4,11:15:46.48:173,0,46	0/0:4,0:20:51.52:0,52,280	1/1:1,14:15:41.84:325,42,0	./.	./.	./.	0/0:10,0:10:23.98:0,24,231	0/1:19,2:21:7.39:7,0,296	0/0:10,0:10:27.04:0,27,267	1/1:4,15:21:39.92:290,40,0	1/1:1,0:2:2.03:6,2,0	./.	./.
chr10	44792765	.	AT	A	3910.82	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=3.764;DP=560;FS=12.512;HRun=10;HaplotypeScore=70.8426;InbreedingCoeff=0.9869;MQ=65.88;MQ0=1;MQRankSum=-1.318;QD=21.25;ReadPosRankSum=1.544;VQSLOD=3.8899;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,23:29:70.05:585,70,0	0/0:0,0:7:20.01:0,20,105	0/0:18,0:17:38.04:0,38,375	0/0:17,0:16:33.03:0,33,342	1/1:3,29:29:71.96:625,72,0	0/0:21,0:22:53.94:0,54,554	0/0:12,1:13:10.03:0,10,329	0/0:37,0:37:79.11:0,79,913	0/0:14,1:15:19.06:0,19,431	0/0:16,0:16:45.12:0,45,498	0/0:14,0:14:36.10:0,36,398	0/0:4,0:21:48.89:0,49,261	0/0:0,0:13:25.70:0,26,129	0/0:4,0:15:28.42:0,28,142	0/0:28,0:28:69.19:0,69,761	0/0:22,0:22:57.15:0,57,630	0/0:23,0:23:54.15:0,54,597	0/0:17,1:18:19.05:0,19,429	1/1:4,16:19:47.98:417,48,0	1/1:3,28:28:71.98:625,72,0	1/1:1,12:13:32.98:286,33,0	0/0:2,0:12:28.71:0,29,146	0/0:7,0:34:67.70:0,68,355	0/0:3,0:10:17.18:0,17,87	0/0:21,0:21:42.11:0,42,458	1/1:3,23:26:38.80:565,39,0	1/1:1,16:17:47.99:417,48,0	1/1:0,16:16:44.99:390,45,0
chr10	44792937	.	CCT	C	9518.94	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=14.183;DP=685;FS=3.079;HRun=0;HaplotypeScore=82.8767;InbreedingCoeff=0.9998;MQ=64.15;MQ0=2;MQRankSum=4.617;QD=44.07;ReadPosRankSum=4.313;VQSLOD=6.7288;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,48:48:99:2147,132,0	0/0:9,0:9:27.09:0,27,522	0/0:16,0:14:39.09:0,39,730	0/0:24,0:17:45.14:0,45,807	1/1:0,32:32:84.29:1365,84,0	0/0:16,0:16:48.16:0,48,975	0/0:22,0:22:66.19:0,66,1223	0/0:37,0:36:99:0,102,1752	0/0:26,0:26:78.25:0,78,1512	0/0:32,0:32:96.32:0,96,1884	0/0:19,0:19:54.17:0,54,1050	0/0:17,0:17:51.15:0,51,965	0/0:24,0:24:72.25:0,72,1421	0/0:28,0:28:78.26:0,78,1506	0/0:38,0:38:99:0,114,2264	0/0:20,0:20:60.19:0,60,1182	0/0:19,0:19:57.17:0,57,1068	0/0:21,0:21:60.17:0,60,1140	1/1:1,11:11:33.06:501,33,0	1/1:0,20:20:51.17:824,51,0	1/1:0,41:41:99:1755,108,0	0/0:16,0:16:48.14:0,48,894	0/0:28,0:28:81.27:0,81,1598	0/0:27,0:27:81.26:0,81,1564	0/0:30,0:30:90.31:0,90,1825	1/1:0,22:22:66.21:1045,66,0	1/1:0,25:25:69.23:1103,69,0	1/1:0,16:16:48.16:779,48,0
chr10	44793431	.	A	AAGATAG	23847.61	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=5.291;DP=699;FS=3.193;HRun=0;HaplotypeScore=129.4136;InbreedingCoeff=0.9563;MQ=59.17;MQ0=1;MQRankSum=-19.106;QD=60.99;ReadPosRankSum=2.385;VQSLOD=5.0068;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,32:49:87.30:3013,87,0	1/1:1,7:10:15.05:539,15,0	0/0:17,0:17:38:0,38,966	0/0:10,0:10:23.11:0,23,494	1/1:2,12:16:18.06:646,18,0	0/0:19,0:19:57.17:0,57,1278	0/0:26,0:26:75.24:0,75,1707	0/0:39,0:39:99:0,117,2610	0/0:25,0:25:72.25:0,72,1671	0/0:34,0:34:99:0,102,2304	0/0:26,0:26:69.24:0,69,1650	1/1:2,20:27:57.20:2038,57,0	1/1:5,16:29:50.84:1812,51,0	1/1:2,16:20:48.16:1703,48,0	0/0:39,0:39:99:0,111,2547	0/0:19,0:19:54.19:0,54,1298	1/1:5,7:15:21.07:718,21,0	0/0:26,0:26:75.26:0,75,1781	1/1:6,11:24:60.16:1875,60,0	1/1:6,23:21:42.14:1464,42,0	1/1:2,9:14:24.08:847,24,0	1/1:1,22:21:48.16:1707,48,0	1/1:5,11:16:27.09:938,27,0	1/1:3,6:13:20.90:752,21,0	0/0:27,0:27:72.23:0,72,1681	1/1:6,22:29:6.11:2456,6,0	1/1:7,26:37:90.31:3232,90,0	1/1:1,2:1:3.01:108,3,0
chr10	44794163	.	A	AACAC	902.54	PASS	AB=0.927;AC=19;AF=0.352;AN=54;BaseQRankSum=-1.327;DP=527;FS=8.732;HRun=0;HaplotypeScore=114.6695;InbreedingCoeff=0.3516;MQ=59.62;MQ0=28;MQRankSum=-0.544;QD=3.23;ReadPosRankSum=-0.239;VQSLOD=1.7528;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:35,0:35:0.20:0,0,370	0/1:6,0:7:12.01:12,0,19	0/1:30,0:12:0:0,0,0	./.	1/1:30,0:30:12.50:58,12,0	0/0:13,0:13:11.39:0,11,113	0/0:24,0:24:27.98:0,28,370	1/1:17,0:14:2.96:19,3,0	0/1:11,0:12:14.95:27,0,15	0/1:12,8:17:22.38:225,0,22	1/1:6,5:10:3.01:71,3,0	0/0:9,0:8:8.04:0,8,80	0/0:8,0:8:15.47:0,15,186	0/0:12,0:12:21.65:0,22,309	0/0:10,0:8:14.99:0,15,166	1/1:9,1:14:8.68:100,9,0	0/1:32,0:30:99:221,0,116	1/1:10,7:25:5.20:253,5,0	0/0:16,0:15:25.61:0,26,343	0/0:18,0:16:12.92:0,13,175	0/0:26,0:27:47.97:0,48,673	0/0:14,0:14:24.04:0,24,288	0/0:15,0:12:12.04:0,12,186	0/0:17,0:21:29.86:0,30,347	1/1:12,10:25:3.01:70,3,0	0/1:18,0:13:7.11:7,0,140	0/0:9,0:8:8:0,8,99	0/0:12,0:9:6.02:0,6,88
chr10	44794201	.	C	CAT	2602.64	PASS	AB=0.971;AC=21;AF=0.375;AN=56;BaseQRankSum=-1.198;DP=535;FS=2.435;HRun=0;HaplotypeScore=90.4954;InbreedingCoeff=-0.1989;MQ=56.85;MQ0=18;MQRankSum=1.109;QD=7.25;ReadPosRankSum=1.739;VQSLOD=3.2881;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:38,0:37:99:316,0,104	1/1:12,1:13:29.42:262,29,0	0/0:31,0:17:43.95:0,44,391	0/0:18,0:11:29.88:0,30,263	1/1:6,23:30:20.67:479,21,0	0/0:15,0:15:20.94:0,21,207	0/0:22,0:22:54.48:0,54,608	0/0:20,0:18:50.88:0,51,427	0/1:16,0:16:2.87:3,0,233	0/0:21,0:19:44.94:0,45,373	0/0:10,0:9:5.32:0,5,49	0/1:13,0:12:1.87:128,0,2	0/1:9,0:8:36.61:37,0,37	0/1:16,1:17:62.41:179,0,62	0/0:17,0:15:38.88:0,39,379	0/1:12,0:12:20.27:20,0,117	0/1:7,1:27:29.70:173,0,30	0/1:27,0:27:48.57:49,0,219	0/1:17,0:17:99:123,0,105	0/1:19,0:19:20.30:253,0,20	0/1:29,0:26:99:104,0,127	0/1:16,0:15:14.59:116,0,15	0/1:12,0:12:27.09:97,0,27	0/1:13,0:13:27.22:38,0,27	0/0:22,0:22:23.10:0,23,199	0/1:22,0:19:50.09:253,0,50	0/1:15,0:14:0.40:98,0,0	0/1:11,0:6:18.04:43,0,18
chr10	44794398	.	A	AT	6204.34	PASS	AB=0.913;AC=18;AF=0.321;AN=56;BaseQRankSum=-11.078;DP=506;FS=22.292;HRun=1;HaplotypeScore=44.9499;InbreedingCoeff=0.8350;MQ=66.66;MQ0=2;MQRankSum=-0.812;QD=29.40;ReadPosRankSum=1.660;VQSLOD=3.1732;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,17:17:45.15:719,45,0	0/0:10,0:10:30.10:0,30,420	0/0:16,0:12:33.10:0,33,433	0/1:16,1:15:24.05:24,0,418	1/1:0,28:28:81.28:1292,81,0	0/0:25,0:25:75.25:0,75,1045	0/0:13,0:13:39.13:0,39,546	0/1:39,6:45:99:167,0,1219	0/0:25,0:25:75.25:0,75,1047	0/0:23,0:23:69.23:0,69,960	0/0:17,2:19:48.16:0,48,667	0/0:14,0:14:39.12:0,39,527	0/0:15,0:15:45.14:0,45,614	0/0:17,0:17:51.17:0,51,713	0/0:11,0:11:33.11:0,33,459	0/0:18,0:18:51.17:0,51,713	0/0:19,0:19:57.19:0,57,796	0/0:6,0:6:18.06:0,18,252	1/1:2,14:13:36.11:553,36,0	1/1:0,20:19:45.15:719,45,0	1/1:2,17:19:39.13:624,39,0	0/0:14,0:14:42.13:0,42,570	0/0:11,0:11:30.09:0,30,403	0/0:12,0:12:36.10:0,36,485	0/0:27,0:27:81.25:0,81,1100	1/1:0,20:19:57.15:860,57,0	1/1:1,17:18:48.16:767,48,0	1/1:0,11:11:30.10:480,30,0
chr10	44796506	.	C	CT	5735.11	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=5.606;DP=604;FS=2.517;HRun=5;HaplotypeScore=64.9124;InbreedingCoeff=0.9944;MQ=78.46;MQ0=0;MQRankSum=-0.326;QD=31.86;ReadPosRankSum=0.837;VQSLOD=5.5393;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,46:47:99:1697,129,0	0/0:16,0:16:45.01:0,45,443	0/0:16,0:15:35.82:0,36,361	0/0:23,0:23:63.15:0,63,668	1/1:2,23:25:63.11:788,63,0	0/0:18,0:18:48.10:0,48,508	0/0:16,0:16:48.11:0,48,508	0/0:22,0:22:57.14:0,57,613	0/0:15,0:15:36.07:0,36,379	0/0:22,0:22:62.25:0,62,675	0/0:19,0:19:51.10:0,51,536	0/0:22,0:22:63.12:0,63,660	0/0:33,0:33:96.23:0,96,1024	0/0:21,0:21:63.16:0,63,677	0/0:30,0:30:84.21:0,84,903	0/0:18,0:18:54.13:0,54,574	0/0:22,0:22:63.16:0,63,677	0/0:17,0:17:51.10:0,51,538	1/1:3,7:10:21.06:262,21,0	1/1:1,22:22:60.15:770,60,0	1/1:1,17:18:45.15:592,45,0	0/0:21,0:21:54.13:0,54,580	0/0:15,0:15:32.99:0,33,330	0/0:30,0:30:87.18:0,87,917	0/0:28,0:28:75.19:0,75,804	1/1:3,14:17:13.09:520,13,0	1/1:0,23:23:63.20:829,63,0	1/1:8,9:17:21.07:276,21,0
chr10	44797489	.	AT	A	5468.09	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=17.477;DP=635;FS=9.962;HRun=6;HaplotypeScore=82.4686;InbreedingCoeff=0.9980;MQ=73.59;MQ0=0;MQRankSum=-2.413;QD=26.94;ReadPosRankSum=3.260;VQSLOD=5.0385;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,18:19:51.06:534,51,0	0/0:9,0:9:24.08:0,24,316	0/0:17,0:17:37.47:0,37,467	0/0:9,0:9:17.91:0,18,193	1/1:3,30:33:84.20:903,84,0	0/0:21,0:21:57.17:0,57,735	0/0:17,0:17:48.16:0,48,631	0/0:35,0:35:96.30:0,96,1238	0/0:17,0:17:51.17:0,51,671	0/0:26,0:26:75.24:0,75,969	0/0:30,0:30:81.26:0,81,1054	0/0:15,0:15:45.14:0,45,579	0/0:29,0:29:78.25:0,78,1011	0/0:25,0:25:66.20:0,66,853	0/0:29,0:29:78.25:0,78,1026	0/0:20,0:20:60.18:0,60,774	0/0:17,0:17:45.12:0,45,574	0/0:22,0:22:57.19:0,57,750	1/1:3,15:18:45.11:484,45,0	1/1:2,26:28:69.17:742,69,0	1/1:1,12:13:33.08:355,33,0	0/0:24,0:24:72.23:0,72,947	0/0:27,0:27:78.25:0,78,1026	0/0:12,0:12:36.07:0,36,451	0/0:31,0:31:90.27:0,90,1168	1/1:3,22:25:26.28:614,26,0	1/1:1,41:42:99:1322,123,0	1/1:4,21:25:48.12:516,48,0
chr10	44797540	.	A	ATATG	801.16	PASS	AB=1.000;AC=7;AF=0.135;AN=52;BaseQRankSum=-4.497;DP=723;FS=5.289;HRun=0;HaplotypeScore=151.7137;InbreedingCoeff=0.8655;MQ=56.68;MQ0=9;MQRankSum=-0.525;QD=7.78;ReadPosRankSum=-0.103;VQSLOD=2.3872;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:35.94:0,36,503	0/0:7,0:7:15.05:0,15,231	./.	./.	0/0:36,0:37:60.15:0,60,816	1/1:8,13:21:18.06:422,18,0	0/0:22,0:22:33.05:0,33,409	0/1:34,0:32:0:0,0,0	1/1:13,14:27:18.06:421,18,0	0/0:28,0:27:8.05:0,8,364	0/0:26,0:26:42.11:0,42,599	0/0:18,0:18:30.10:0,30,452	0/0:23,0:23:30.07:0,30,412	0/0:28,0:28:42.10:0,42,579	0/0:24,0:24:36.12:0,36,551	0/0:23,0:23:45.14:0,45,668	0/0:19,0:19:36.05:0,36,464	1/1:21,0:20:5.49:87,5,0	0/0:23,0:22:18.06:0,18,275	0/0:37,0:38:69.11:0,69,955	0/0:28,0:27:60.20:0,60,910	0/0:29,0:29:48.15:0,48,715	0/0:29,0:29:42.14:0,42,644	0/0:19,0:19:23.88:0,24,342	0/0:31,0:32:57.17:0,57,832	0/0:20,0:20:27.07:0,27,375	0/0:39,0:39:28.79:0,29,661	0/0:18,0:17:15.04:0,15,214
chr10	44799504	.	G	GACACACAC	2401.35	PASS	AC=12;AF=0.231;AN=52;BaseQRankSum=5.833;DP=424;FS=5.985;HRun=0;HaplotypeScore=116.0030;InbreedingCoeff=0.8556;MQ=66.20;MQ0=8;MQRankSum=-7.683;QD=27.92;ReadPosRankSum=-2.588;VQSLOD=2.6271;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:4,0:3:6.02:0,6,154	0/0:25,0:19:54.18:0,54,1331	0/0:22,0:11:23.53:0,24,488	1/1:4,0:15:3.01:65,3,0	0/0:20,0:20:44.28:0,44,1222	0/0:14,0:14:36.10:0,36,860	0/0:27,0:23:66.18:0,66,1699	0/0:12,0:12:30.10:0,30,811	0/0:17,0:17:7.83:0,8,1047	0/0:12,0:12:24.08:0,24,667	0/0:8,0:8:15.05:0,15,393	0/0:8,0:8:18.05:0,18,400	0/0:8,0:8:21.06:0,21,503	0/0:10,0:10:27.08:0,27,643	0/0:17,0:15:39.13:0,39,1079	0/0:22,0:22:54.13:0,54,1332	0/0:19,0:18:45.15:0,45,1174	1/1:15,0:12:36.12:930,36,0	1/1:24,0:19:0.47:1,0,0	./.	0/0:11,0:11:19.59:0,20,549	0/0:14,0:14:11.97:0,12,324	0/0:26,0:24:42.14:0,42,1058	0/0:17,0:17:41.83:0,42,1188	1/1:4,8:11:21.96:515,22,0	1/1:17,0:17:38.87:929,39,0	1/1:3,0:3:8.99:120,9,0
chr10	44799505	.	ACTCTCTCTCTCTCT	A	1146.99	PASS	AB=0.871;AC=12;AF=0.261;AN=46;BaseQRankSum=3.138;DP=426;FS=3.105;HRun=0;HaplotypeScore=144.3189;InbreedingCoeff=0.4597;MQ=65.72;MQ0=8;MQRankSum=-2.936;QD=12.33;ReadPosRankSum=-0.524;VQSLOD=2.3208;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:3,0:3:5.99:0,6,94	./.	0/0:22,0:11:0.94:0,1,2	0/0:15,0:15:3.01:0,3,136	0/0:18,0:19:15.94:0,16,654	0/0:14,0:15:15.05:0,15,638	0/0:26,0:22:3.01:0,3,89	0/0:8,0:12:15.05:0,15,603	0/0:16,0:16:6.02:0,6,375	./.	1/1:3,5:8:6.02:234,6,0	1/1:5,3:8:3.01:117,3,0	1/1:6,2:8:6.02:234,6,0	0/0:10,0:10:18.06:0,18,970	0/1:18,0:16:9.95:10,0,366	0/0:18,0:22:33.58:0,34,1109	0/0:17,0:18:21.07:0,21,1346	0/0:17,0:14:17.27:0,17,568	0/0:24,0:19:0.47:0,0,1	./.	1/1:10,0:11:6.02:215,6,0	1/1:9,5:14:3.48:119,3,0	0/1:17,9:24:26.42:354,0,26	./.	0/0:13,0:12:16.35:0,16,466	0/0:17,0:17:27.98:0,28,933	0/0:4,0:4:5.51:0,6,76
chr10	44800547	.	GA	G	7007.56	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=14.531;DP=805;FS=2.593;HRun=2;HaplotypeScore=79.8455;InbreedingCoeff=0.9998;MQ=74.16;MQ0=2;MQRankSum=-0.008;QD=34.52;ReadPosRankSum=3.981;VQSLOD=5.3187;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,159,2295	0/0:15,0:15:45.15:0,45,674	0/0:38,0:33:92.92:0,93,1284	0/0:22,0:21:48.16:0,48,718	0/0:27,0:27:81.26:0,81,1191	0/0:19,0:19:54.17:0,54,785	0/0:27,0:27:81.26:0,81,1193	0/0:40,0:40:99:0,117,1718	0/0:25,0:25:75.25:0,75,1124	0/0:31,0:31:93.30:0,93,1345	0/0:17,0:17:48.16:0,48,717	1/1:0,29:29:78.25:1012,78,0	1/1:0,28:28:78.25:1012,78,0	1/1:0,26:26:69.22:894,69,0	0/0:31,0:31:90.30:0,90,1347	0/0:31,0:31:93.31:0,93,1375	1/1:0,27:27:63.20:818,63,0	0/0:17,0:16:48.16:0,48,719	0/0:38,0:38:99:0,114,1604	0/0:21,0:21:63.21:0,63,944	0/0:44,0:44:99:0,129,1912	1/1:0,32:32:90.29:1168,90,0	1/1:0,32:32:90.29:1168,90,0	1/1:0,29:29:72.23:935,72,0	0/0:20,0:20:60.20:0,60,899	0/0:31,0:31:93.31:0,93,1377	0/0:44,0:44:99:0,126,1884	0/0:9,0:9:27.09:0,27,404
chr10	44803299	.	ACTT	A	621.15	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.117;DP=690;FS=0.000;HRun=0;HaplotypeScore=89.4283;InbreedingCoeff=0.9686;MQ=48.22;MQ0=16;MQRankSum=-0.540;QD=32.69;ReadPosRankSum=1.467;VQSLOD=4.0444;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:36:57.20:0,57,1313	0/0:11,0:11:33.11:0,33,761	0/0:16,0:4:12.04:0,12,277	0/0:21,0:11:33.11:0,33,758	0/0:32,0:25:66.23:0,66,1520	0/0:25,0:25:60.16:0,60,1333	0/0:22,0:22:57.20:0,57,1283	0/0:35,0:22:57.20:0,57,1315	0/0:20,0:19:54.19:0,54,1219	0/0:25,0:25:75.26:0,75,1730	0/0:27,0:27:63.22:0,63,1453	0/0:16,0:16:39.13:0,39,892	0/0:17,0:17:39.13:0,39,859	0/0:12,0:11:30.10:0,30,639	0/0:14,0:14:39.13:0,39,899	0/0:29,0:28:72.21:0,72,1611	1/1:0,19:17:42.14:716,42,0	0/0:25,0:24:57.18:0,57,1266	0/0:18,0:9:30.10:0,30,692	0/0:33,0:29:84.17:0,84,1779	0/0:34,0:31:81.28:0,81,1867	0/0:28,0:28:75.26:0,75,1724	0/0:39,0:39:99:0,114,2629	0/0:22,0:22:51.18:0,51,1176	0/0:25,0:24:66.23:0,66,1522	0/0:33,0:28:81.20:0,81,1771	0/0:38,0:32:87.26:0,87,1954	0/0:15,0:12:36.12:0,36,827
chr10	44804344	.	C	CCA	5335.79	PASS	AB=0.560;AC=15;AF=0.268;AN=56;BaseQRankSum=-6.537;DP=617;FS=1.854;HRun=0;HaplotypeScore=71.2205;InbreedingCoeff=0.8790;MQ=53.50;MQ0=14;MQRankSum=-11.586;QD=34.65;ReadPosRankSum=-0.886;VQSLOD=6.6862;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:3,11:14:3.78:315,0,4	0/0:15,0:15:45.15:0,45,662	0/0:19,0:12:33.08:0,33,444	0/0:18,0:14:42.13:0,42,581	1/1:2,26:20:36.12:670,36,0	0/0:26,0:26:72.22:0,72,1021	0/0:21,0:21:5.04:0,5,736	0/0:30,0:23:66.22:0,66,971	0/0:24,0:24:66.21:0,66,951	0/0:37,0:37:99:0,105,1492	0/0:26,0:26:66.14:0,66,952	0/0:16,0:16:45.14:0,45,641	0/0:21,0:21:60.13:0,60,835	0/0:19,0:19:57.19:0,57,838	0/0:24,0:24:63.20:0,63,908	0/0:19,0:19:54.17:0,54,775	0/0:34,0:34:84.27:0,84,1215	0/0:27,0:26:54.61:0,55,754	1/1:1,15:17:48.13:820,48,0	1/1:2,33:32:72.25:1341,72,0	1/1:1,7:6:12.04:225,12,0	0/0:19,0:19:45.14:0,45,643	0/0:23,0:23:57.18:0,57,819	0/0:19,0:19:45.14:0,45,644	0/0:26,0:26:75.24:0,75,1083	1/1:1,16:16:48.11:799,48,0	1/1:2,28:28:60.21:1111,60,0	1/1:1,2:2:3.01:56,3,0
chr10	44804833	.	A	AG	6057.02	PASS	AB=0.541;AC=15;AF=0.278;AN=54;BaseQRankSum=-8.365;DP=593;FS=0.000;HRun=0;HaplotypeScore=50.1801;InbreedingCoeff=0.9017;MQ=53.05;MQ0=12;MQRankSum=1.625;QD=36.49;ReadPosRankSum=2.731;VQSLOD=4.4438;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:3,17:20:28.88:678,0,29	0/0:9,0:9:21.06:0,21,292	./.	0/0:9,0:4:12.03:0,12,152	1/1:4,24:25:60.20:914,60,0	0/0:31,0:31:84.24:0,84,1108	0/0:18,0:15:42.10:0,42,562	0/0:34,0:28:75.08:0,75,940	0/0:21,0:21:63.17:0,63,828	0/0:26,0:25:75.24:0,75,1015	0/0:23,0:22:54.13:0,54,703	0/0:26,0:26:75.22:0,75,999	0/0:14,0:14:36.10:0,36,502	0/0:28,0:27:78.25:0,78,1070	0/0:22,0:22:63.17:0,63,817	0/0:18,0:18:51.13:0,51,660	0/0:30,0:30:78.23:0,78,1050	0/0:28,0:26:75.24:0,75,1029	1/1:0,17:17:51.01:660,51,0	1/1:0,24:22:54.10:794,54,0	1/1:0,11:11:27.09:411,27,0	0/0:23,0:23:63.14:0,63,851	0/0:22,0:22:63.07:0,63,828	0/0:21,0:21:63.19:0,63,859	0/0:19,0:19:48.12:0,48,620	1/1:0,22:22:66.21:982,66,0	1/1:0,26:26:54.18:815,54,0	1/1:0,17:18:54.16:802,54,0
chr10	44806148	.	CA	C	3152.85	PASS	AB=0.900;AC=41;AF=0.854;AN=48;BaseQRankSum=8.049;DP=478;FS=0.000;HRun=10;HaplotypeScore=68.0272;InbreedingCoeff=0.8118;MQ=44.35;MQ0=48;MQRankSum=-4.070;QD=8.06;ReadPosRankSum=1.382;VQSLOD=1.8704;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,0:7:4.07:12,4,0	0/1:8,1:9:1.99:2,0,208	./.	./.	1/1:1,0:17:20.37:60,20,0	0/0:24,0:24:45.11:0,45,489	0/0:8,0:8:18.05:0,18,199	1/1:18,8:12:19.99:155,20,0	0/0:17,0:17:45.11:0,45,490	1/1:3,20:21:50.96:439,51,0	1/1:7,21:25:49.83:403,50,0	1/1:0,0:8:14.26:42,14,0	1/1:1,0:16:22.41:66,22,0	1/1:2,0:19:17.09:62,17,0	1/1:3,20:23:50.96:442,51,0	1/1:0,17:17:44.99:390,45,0	1/1:3,0:26:34.63:102,35,0	1/1:2,18:20:38.99:338,39,0	1/1:8,0:8:14.26:42,14,0	1/1:4,0:13:14.96:48,15,0	./.	1/1:3,0:17:18.33:54,18,0	1/1:2,0:21:32.36:94,32,0	1/1:0,0:10:6.01:31,6,0	1/1:0,17:17:41.99:365,42,0	1/1:2,0:15:22.40:66,22,0	1/1:2,0:19:30.55:90,31,0	./.
chr10	44807809	.	GC	G	985.99	PASS	AB=0.533;AC=11;AF=0.212;AN=52;BaseQRankSum=9.654;DP=493;FS=4.121;HRun=4;HaplotypeScore=67.8776;InbreedingCoeff=0.8242;MQ=64.71;MQ0=3;MQRankSum=-9.003;QD=13.89;ReadPosRankSum=0.737;VQSLOD=2.3237;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,6:4:9.03:108,9,0	0/0:10,0:10:30.10:0,30,420	0/0:24,0:20:31.93:0,32,505	0/0:22,0:18:33.94:0,34,534	1/1:1,18:15:14.95:155,15,0	0/0:26,0:26:72.24:0,72,1007	0/0:20,0:20:60.19:0,60,816	0/0:28,0:27:75.24:0,75,1027	0/0:11,0:11:33.11:0,33,460	0/0:29,1:29:84.28:0,84,1173	0/0:28,0:28:75.12:0,75,1048	0/0:18,0:18:48.15:0,48,653	0/0:18,0:18:51.04:0,51,713	0/0:24,0:24:63.14:0,63,857	0/0:22,0:22:60.18:0,60,806	0/0:24,0:24:60.19:0,60,822	0/0:24,0:24:66.22:0,66,924	0/0:19,0:19:51.13:0,51,688	./.	1/1:1,18:14:29.91:294,30,0	./.	0/0:17,0:17:45.08:0,45,605	0/0:20,0:20:57.14:0,57,773	0/0:15,0:15:33.11:0,33,462	0/0:16,0:16:45.15:0,45,629	0/1:1,7:7:23.94:162,0,24	1/1:0,18:17:33.10:395,33,0	1/1:0,1:1:3.01:36,3,0
chr10	44807994	.	CA	C	4523.71	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=6.380;DP=536;FS=0.000;HRun=2;HaplotypeScore=62.3837;InbreedingCoeff=0.9856;MQ=53.13;MQ0=12;MQRankSum=4.985;QD=32.78;ReadPosRankSum=2.469;VQSLOD=4.6545;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:19:48.13:0,48,739	0/0:7,0:7:21.07:0,21,335	0/0:31,0:12:36.04:0,36,507	0/0:19,0:10:30.10:0,30,480	0/0:13,0:13:36.12:0,36,573	0/0:21,0:21:54.18:0,54,860	0/0:26,0:25:63.16:0,63,953	0/0:34,0:23:66.19:0,66,1004	0/0:18,0:18:54.17:0,54,839	0/0:11,0:11:33.10:0,33,505	0/0:5,0:5:9.03:0,9,144	1/1:4,18:22:49.05:673,49,0	1/1:2,24:26:43.88:858,44,0	1/1:0,21:21:60.20:832,60,0	0/0:24,0:24:69.17:0,69,1071	0/0:16,0:16:39.06:0,39,593	1/1:2,22:23:35.85:734,36,0	0/0:36,0:36:95.74:0,96,1398	0/0:18,0:13:39.10:0,39,592	0/0:15,0:14:42.14:0,42,657	0/0:28,0:27:78.26:0,78,1230	1/1:0,8:8:21.03:271,21,0	1/1:0,13:11:24.03:312,24,0	1/1:4,20:24:44.87:844,45,0	0/0:19,0:19:51.15:0,51,790	0/0:12,0:11:24.08:0,24,383	0/0:18,0:18:45.15:0,45,717	0/0:6,0:6:18.06:0,18,287
chr10	44808070	.	AG	A	2751.28	PASS	AB=0.540;AC=9;AF=0.161;AN=56;BaseQRankSum=-0.250;DP=476;FS=10.713;HRun=5;HaplotypeScore=72.8802;InbreedingCoeff=0.5320;MQ=51.64;MQ0=14;MQRankSum=3.472;QD=23.32;ReadPosRankSum=1.514;VQSLOD=2.2306;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:13:23.99:0,24,214	0/0:9,0:9:27.09:0,27,366	0/0:7,0:2:2.97:0,3,20	0/0:7,0:3:3:0,3,28	0/0:23,0:23:26.96:0,27,255	0/0:21,0:21:57.18:0,57,763	0/0:20,0:18:48.16:0,48,657	0/0:23,0:18:48.16:0,48,646	0/0:25,0:25:72.24:0,72,983	1/1:4,13:17:5.12:403,5,0	1/1:0,17:17:45.13:508,45,0	0/0:18,0:17:45.15:0,45,615	0/0:23,0:23:51.17:0,51,696	0/0:19,0:19:48.16:0,48,656	0/1:2,17:19:27.35:490,0,27	0/1:1,16:17:4.65:338,0,5	0/0:17,0:17:48.15:0,48,639	0/1:7,19:26:48.03:516,0,48	0/0:10,0:8:17.92:0,18,151	0/0:21,0:21:51.04:0,51,496	0/0:37,0:36:77.82:0,78,646	0/0:9,0:8:24.08:0,24,325	0/0:9,0:9:18.06:0,18,246	0/0:10,0:10:30.08:0,30,372	1/1:1,21:22:57.16:647,57,0	0/0:13,0:12:27.01:0,27,271	0/0:16,0:16:35.91:0,36,331	0/0:6,0:4:8.98:0,9,73
chr10	44808175	.	AAC	A	3814.19	PASS	AB=0.967;AC=28;AF=0.500;AN=56;BaseQRankSum=13.397;DP=359;FS=6.649;HRun=0;HaplotypeScore=76.8003;InbreedingCoeff=0.8329;MQ=64.57;MQ0=1;MQRankSum=-9.196;QD=24.61;ReadPosRankSum=-0.061;VQSLOD=3.6464;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:13,1:14:6.12:114,0,6	0/0:7,0:7:21.07:0,21,397	0/0:17,0:13:34.85:0,35,505	0/0:10,0:7:17.31:0,17,225	0/1:7,0:7:12.20:12,0,13	0/0:15,0:15:45.15:0,45,846	0/0:10,0:10:30.08:0,30,492	0/0:25,0:25:72.22:0,72,1250	0/0:12,0:12:36.10:0,36,629	0/0:21,0:21:63.21:0,63,1185	0/0:23,0:23:69.24:0,69,1298	1/1:0,7:7:21.07:312,21,0	1/1:0,4:4:12.04:178,12,0	1/1:2,5:7:5.23:247,5,0	0/0:15,0:15:45.15:0,45,868	0/0:14,0:14:42.14:0,42,773	1/1:3,13:15:45.15:664,45,0	0/0:19,0:19:57.16:0,57,991	1/1:16,1:15:41.59:341,42,0	1/1:18,0:18:40.46:292,40,0	1/1:7,0:7:17.79:152,18,0	1/1:1,4:5:15.04:205,15,0	1/1:4,14:18:51.10:657,51,0	1/1:1,2:3:6.02:85,6,0	0/0:16,0:16:48.16:0,48,925	1/1:13,0:13:38.11:237,38,0	1/1:15,0:15:37.95:225,38,0	1/1:4,0:4:11.86:92,12,0
chr10	44808176	.	AC	A	3690.84	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=14.024;DP=355;FS=9.474;HRun=2;HaplotypeScore=70.1206;InbreedingCoeff=0.9511;MQ=64.68;MQ0=1;MQRankSum=-9.385;QD=24.28;ReadPosRankSum=-1.393;VQSLOD=2.1593;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,10:13:30.02:345,30,0	0/0:7,0:7:21.07:0,21,296	0/0:16,0:13:36.39:0,36,418	0/0:10,0:7:12.84:0,13,167	1/1:2,4:6:5.93:40,6,0	0/0:15,0:15:42.14:0,42,593	0/0:10,0:10:27.02:0,27,351	0/0:25,0:25:63.19:0,63,857	0/0:12,0:12:36.09:0,36,475	0/0:21,0:21:63.20:0,63,864	0/0:23,0:23:66.22:0,66,928	1/1:7,0:7:20.29:110,20,0	1/1:4,0:4:11.53:62,12,0	1/1:7,0:7:17.14:90,17,0	0/0:15,0:15:45.15:0,45,636	0/0:14,0:14:42.11:0,42,558	1/1:16,0:15:43.54:240,44,0	0/0:18,0:18:51.13:0,51,681	1/1:4,12:15:42.12:513,42,0	1/1:2,16:18:48.06:562,48,0	1/1:2,5:7:17.97:206,18,0	1/1:5,0:5:14.59:90,15,0	1/1:17,0:17:46.74:288,47,0	1/1:3,0:3:5.58:27,6,0	0/0:16,0:16:48.15:0,48,662	1/1:1,12:13:39.08:483,39,0	1/1:1,14:15:39.06:481,39,0	1/1:0,4:4:12.04:154,12,0
chr10	44808198	.	G	GA	4435.64	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=10.851;DP=352;FS=12.647;HRun=7;HaplotypeScore=71.0937;InbreedingCoeff=0.9176;MQ=62.36;MQ0=1;MQRankSum=-10.154;QD=28.80;ReadPosRankSum=-0.707;VQSLOD=4.2552;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,6:10:15.04:176,15,0	0/0:7,0:7:21.05:0,21,214	0/0:7,0:5:11.31:0,11,98	0/0:8,0:7:6.69:0,7,84	1/1:3,6:9:9.03:109,9,0	0/0:17,0:17:51.12:0,51,520	0/0:11,0:11:24.05:0,24,245	0/0:27,0:27:66.12:0,66,662	0/0:9,0:9:27.06:0,27,275	0/0:23,0:23:69.13:0,69,695	0/0:20,0:20:54.12:0,54,551	1/1:1,6:7:18.06:226,18,0	1/1:2,3:5:12.04:151,12,0	1/1:0,6:6:18.06:226,18,0	0/0:15,0:15:45.10:0,45,459	0/0:15,0:15:42.09:0,42,428	1/1:2,14:16:42.13:526,42,0	0/0:18,0:18:48.11:0,48,488	1/1:3,15:16:45.10:547,45,0	1/1:3,13:16:33.10:401,33,0	1/1:3,3:6:6.02:75,6,0	1/1:0,6:6:18.06:222,18,0	1/1:1,16:17:45.14:566,45,0	1/1:1,2:3:3.01:38,3,0	0/0:19,0:19:45.10:0,45,459	1/1:2,12:14:39.12:490,39,0	1/1:2,16:17:48.12:572,48,0	1/1:0,3:3:9.03:110,9,0
chr10	44808225	.	AATGTATC	A	5214.70	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=11.321;DP=352;FS=4.744;HRun=0;HaplotypeScore=107.0386;InbreedingCoeff=0.9316;MQ=55.92;MQ0=2;MQRankSum=-11.905;QD=57.30;ReadPosRankSum=0.930;VQSLOD=4.2943;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,3:6:9.03:228,9,0	0/0:9,0:9:27.04:0,27,922	0/0:5,0:5:9.02:0,9,342	0/0:5,0:4:9.03:0,9,266	1/1:0,12:12:24.04:548,24,0	0/0:18,0:18:54.19:0,54,1953	0/0:8,0:8:24.08:0,24,878	0/0:29,0:29:84.26:0,84,3060	0/0:12,0:12:30.10:0,30,1111	0/0:22,0:22:63.17:0,63,2304	0/0:21,0:21:57.20:0,57,2243	0/0:6,0:6:18.06:0,18,708	0/0:6,0:6:9.03:0,9,355	0/0:8,0:8:15.05:0,15,588	0/0:10,0:10:30.10:0,30,1164	0/0:17,0:17:51.18:0,51,1894	0/0:17,0:17:33.11:0,33,1288	0/0:16,0:16:42.14:0,42,1573	1/1:3,12:14:33.04:727,33,0	1/1:2,14:16:42.14:1065,42,0	1/1:1,5:6:9.03:224,9,0	0/0:10,0:10:30.10:0,30,1181	0/0:19,0:19:45.15:0,45,1704	0/0:6,0:6:12.04:0,12,473	0/0:17,0:17:45.15:0,45,1704	1/1:2,16:18:48.16:1204,48,0	1/1:1,13:13:39.13:990,39,0	1/1:1,3:3:9.03:228,9,0
chr10	44809247	.	TA	T	7028.26	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=16.044;DP=689;FS=6.478;HRun=3;HaplotypeScore=64.5663;InbreedingCoeff=0.9996;MQ=62.46;MQ0=4;MQRankSum=0.538;QD=33.15;ReadPosRankSum=0.581;VQSLOD=5.0532;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,22:22:57.18:706,57,0	0/0:14,0:14:42.14:0,42,597	0/0:28,0:22:51.17:0,51,706	0/0:26,0:18:50.76:0,51,697	1/1:1,29:30:75.23:929,75,0	0/0:30,0:30:87.29:0,87,1244	0/0:17,0:17:51.17:0,51,734	0/0:26,0:26:78.25:0,78,1093	0/0:25,0:25:72.22:0,72,1002	0/0:36,0:36:99:0,108,1552	0/0:32,0:32:87.29:0,87,1249	0/0:14,0:14:33.10:0,33,459	0/0:27,0:27:78.25:0,78,1105	0/0:22,0:22:66.22:0,66,950	0/0:18,0:18:48.11:0,48,648	0/0:29,0:29:87.29:0,87,1250	0/0:27,0:27:78.25:0,78,1098	0/0:15,0:15:45.06:0,45,597	1/1:1,21:22:63.19:768,63,0	1/1:1,29:30:84.26:1041,84,0	1/1:1,26:27:72.23:892,72,0	0/0:28,0:28:78.26:0,78,1123	0/0:28,0:28:78.26:0,78,1120	0/0:13,0:13:39.13:0,39,561	0/0:22,0:22:63.21:0,63,907	1/1:2,31:33:53.05:1093,53,0	1/1:1,38:39:99:1301,105,0	1/1:0,9:9:24.08:297,24,0
chr10	44809875	.	ACTT	A	7870.39	PASS	AC=16;AF=0.308;AN=52;BaseQRankSum=14.012;DP=687;FS=13.876;HRun=0;HaplotypeScore=138.3672;InbreedingCoeff=0.9982;MQ=52.14;MQ0=61;MQRankSum=-2.360;QD=35.94;ReadPosRankSum=2.428;VQSLOD=5.4098;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,29:29:56.98:893,57,0	0/0:10,0:10:30.10:0,30,670	./.	./.	1/1:0,37:36:84.24:1315,84,0	0/0:36,0:36:99:0,99,2086	0/0:14,0:14:39.12:0,39,827	0/0:37,0:35:93.28:0,93,1979	0/0:22,0:22:63.18:0,63,1296	0/0:34,0:34:99:0,99,2089	0/0:35,0:33:90.30:0,90,1967	0/0:14,0:14:39.13:0,39,871	0/0:33,0:33:99:0,99,2147	0/0:16,0:16:48.16:0,48,1068	0/0:24,0:24:66.23:0,66,1447	0/0:27,0:27:78.27:0,78,1701	0/0:21,0:21:63.22:0,63,1379	0/0:7,0:6:18.03:0,18,356	1/1:4,26:26:63.47:953,63,0	1/1:3,30:33:84.29:1370,84,0	1/1:0,26:26:57.19:906,57,0	0/0:27,0:27:78.27:0,78,1724	0/0:26,0:26:69.23:0,69,1463	0/0:12,0:12:33.10:0,33,696	0/0:17,0:17:45.13:0,45,923	1/1:4,17:21:26.54:772,27,0	1/1:0,26:26:69.24:1124,69,0	1/1:0,16:14:33.11:538,33,0
chr10	44811207	.	C	CCACT	9752.76	PASS	AB=0.941;AC=17;AF=0.304;AN=56;BaseQRankSum=14.498;DP=563;FS=0.374;HRun=0;HaplotypeScore=101.7345;InbreedingCoeff=0.8758;MQ=77.42;MQ0=2;MQRankSum=-12.194;QD=56.37;ReadPosRankSum=0.287;VQSLOD=6.1950;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,8:13:10.37:640,10,0	0/0:11,0:11:33.11:0,33,639	0/0:21,0:21:51.17:0,51,972	0/0:28,0:28:75.23:0,75,1362	1/1:5,28:31:75.26:2033,75,0	0/0:25,0:25:75.26:0,75,1449	0/0:14,0:14:42.14:0,42,813	0/0:24,0:24:69.23:0,69,1305	0/0:26,0:26:78.27:0,78,1501	0/0:28,0:28:84.29:0,84,1626	0/0:27,0:27:78.27:0,78,1501	0/0:23,0:23:69.24:0,69,1335	0/0:20,0:20:57.20:0,57,1105	0/0:17,0:17:48.15:0,48,896	0/0:24,0:24:72.25:0,72,1394	0/0:20,0:20:57.17:0,57,1039	0/0:21,0:21:35.29:0,35,1025	0/1:15,0:16:26.49:26,0,711	1/1:7,7:10:27.09:644,27,0	1/1:9,24:32:87.30:2372,87,0	1/1:2,13:15:33.11:901,33,0	0/0:9,0:9:27.09:0,27,523	0/0:5,0:5:15.05:0,15,290	0/0:26,0:26:75.25:0,75,1422	0/0:21,0:21:54.19:0,54,1047	1/1:4,18:21:57.15:1478,57,0	1/1:5,16:21:60.16:1577,60,0	1/1:0,1:1:3.01:82,3,0
chr10	44811321	.	CT	C	4066.17	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=12.815;DP=645;FS=2.745;HRun=4;HaplotypeScore=74.7350;InbreedingCoeff=0.9995;MQ=73.74;MQ0=0;MQRankSum=-0.953;QD=33.06;ReadPosRankSum=3.842;VQSLOD=4.3679;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:78.25:0,78,1073	0/0:13,0:13:39.12:0,39,531	0/0:21,0:21:63.20:0,63,861	0/0:23,0:23:51.12:0,51,669	0/0:34,0:34:99:0,102,1425	0/0:25,0:25:66.22:0,66,924	0/0:14,0:14:42.14:0,42,588	0/0:29,0:29:81.26:0,81,1106	0/0:21,0:21:57.18:0,57,783	0/0:35,0:35:99:0,99,1303	0/0:26,0:26:75.24:0,75,1034	1/1:2,24:26:72.22:864,72,0	1/1:0,23:23:66.20:792,66,0	1/1:1,19:20:57.17:684,57,0	0/0:32,0:32:90.29:0,90,1243	0/0:17,0:17:48.16:0,48,672	0/0:34,0:34:99:0,99,1361	0/0:22,0:22:63.21:0,63,881	0/0:20,0:19:54.18:0,54,756	0/0:30,0:30:90.26:0,90,1209	0/0:15,0:15:39.11:0,39,528	1/1:1,31:32:87.27:1043,87,0	1/1:0,13:13:32.95:396,33,0	1/1:1,8:9:24.07:288,24,0	0/0:17,0:17:51.17:0,51,714	0/0:28,0:27:75.25:0,75,1050	0/0:24,0:24:72.21:0,72,954	0/0:13,0:13:36.12:0,36,504
chr10	44811756	.	CTGATAG	C	7626.41	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=13.751;DP=703;FS=4.617;HRun=0;HaplotypeScore=170.7546;InbreedingCoeff=0.9990;MQ=70.91;MQ0=0;MQRankSum=-15.452;QD=51.18;ReadPosRankSum=1.352;VQSLOD=4.5603;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,148,4714	0/0:9,0:9:27.09:0,27,963	0/0:35,0:35:62.51:0,63,2530	0/0:26,0:26:69.24:0,69,2225	0/0:22,0:22:63.22:0,63,2181	0/0:18,0:18:51.18:0,51,1807	0/0:20,0:20:60.21:0,60,2010	0/0:30,0:29:84.26:0,84,2576	0/0:37,0:37:99:0,108,3791	0/0:25,0:25:72.25:0,72,2323	0/0:27,0:27:78.25:0,78,2492	1/1:1,21:22:45.08:1061,45,0	1/1:1,25:26:69.24:1627,69,0	1/1:2,17:19:45.15:1057,45,0	0/0:33,0:33:93.32:0,93,3211	0/0:29,0:29:84.27:0,84,2712	1/1:2,19:21:42.14:988,42,0	0/0:14,0:14:42.14:0,42,1307	0/0:21,0:21:60.19:0,60,1809	0/0:32,0:32:96.33:0,96,3294	0/0:44,0:44:99:0,132,4422	1/1:2,18:20:48.16:1068,48,0	1/1:0,24:24:57.02:1329,57,0	1/1:1,16:17:21.07:496,21,0	0/0:18,0:18:51.15:0,51,1664	0/0:21,0:21:63.20:0,63,2098	0/0:29,0:29:87.29:0,87,2854	0/0:14,0:14:42.13:0,42,1355
chr10	44812785	.	G	GT	14173.76	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=1.218;DP=564;FS=0.000;HRun=5;HaplotypeScore=76.6844;InbreedingCoeff=0.9983;MQ=78.43;MQ0=0;MQRankSum=-6.678;QD=32.14;ReadPosRankSum=4.083;VQSLOD=5.2442;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,29:30:81.26:1065,81,0	0/0:8,0:8:21.05:0,21,226	0/0:13,0:13:33.08:0,33,355	0/0:18,0:18:30.07:0,30,322	1/1:2,30:33:87.28:1137,87,0	0/0:24,0:24:66.14:0,66,694	0/0:11,0:11:33.08:0,33,348	0/0:33,0:33:87.19:0,87,921	0/0:16,0:16:45.07:0,45,455	1/1:3,21:24:63.19:814,63,0	1/1:3,18:21:54.18:710,54,0	1/1:1,16:17:45.15:592,45,0	1/1:1,14:15:39.13:512,39,0	1/1:3,20:23:60.20:789,60,0	1/1:2,12:14:30.10:395,30,0	1/1:3,17:20:45.15:592,45,0	1/1:17,0:17:44.16:276,44,0	1/1:1,15:16:39.13:513,39,0	1/1:2,13:15:39.12:499,39,0	1/1:2,27:28:69.22:908,69,0	1/1:0,8:8:24.08:316,24,0	1/1:4,21:25:57.19:750,57,0	1/1:3,24:27:65.96:842,66,0	1/1:0,9:10:30.10:392,30,0	1/1:5,35:40:87.28:1145,87,0	1/1:0,18:18:54.18:711,54,0	1/1:2,22:24:66.21:862,66,0	1/1:3,12:15:26.72:355,27,0
chr10	44812790	.	T	TA	4774.63	PASS	AB=1.000;AC=33;AF=0.589;AN=56;BaseQRankSum=13.471;DP=561;FS=3.617;HRun=2;HaplotypeScore=105.7140;InbreedingCoeff=0.3641;MQ=78.04;MQ0=0;MQRankSum=-4.577;QD=10.93;ReadPosRankSum=9.769;VQSLOD=2.2755;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:29:75.92:386,76,0	0/0:8,0:8:24.07:0,24,287	0/0:14,0:14:39.09:0,39,448	0/0:16,0:16:36.06:0,36,391	1/1:31,0:31:39.69:355,40,0	0/0:23,0:23:69.21:0,69,843	0/0:13,0:13:36.08:0,36,419	0/0:35,0:35:99:0,102,1173	0/0:15,0:15:33.10:0,33,408	0/1:25,0:25:14.31:182,0,14	0/1:23,0:23:45.03:181,0,45	1/1:17,0:17:20.66:209,21,0	0/1:17,0:17:28.56:152,0,29	0/1:23,0:23:13.69:230,0,14	0/1:15,0:15:39.23:95,0,39	0/1:18,0:18:4.20:156,0,4	1/1:0,18:18:45.15:644,45,0	1/1:15,0:15:37.09:197,37,0	0/1:17,0:17:37.11:93,0,37	0/1:29,0:28:20.50:241,0,21	0/1:9,0:9:1.05:86,0,1	1/1:22,0:22:11.07:199,11,0	1/1:26,0:26:16.50:258,16,0	1/1:11,0:11:4.66:118,5,0	1/1:36,0:36:58.56:359,59,0	1/1:20,0:20:26.56:205,27,0	1/1:24,0:24:61.21:310,61,0	1/1:12,0:12:24.56:117,25,0
chr10	44813002	.	AT	A	7132.93	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=6.468;DP=629;FS=9.231;HRun=1;HaplotypeScore=113.8998;InbreedingCoeff=0.9991;MQ=77.36;MQ0=0;MQRankSum=-2.588;QD=37.15;ReadPosRankSum=3.958;VQSLOD=4.1495;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,44:44:99:1780,129,0	0/0:8,2:8:24.08:0,24,380	0/0:21,0:21:60.18:0,60,917	0/0:24,0:24:69.23:0,69,1083	1/1:0,21:11:33.11:461,33,0	0/0:35,0:35:99:0,105,1676	0/0:18,0:18:54.15:0,54,816	0/0:26,0:26:78.25:0,78,1206	0/0:21,0:21:63.20:0,63,984	0/0:24,0:24:72.20:0,72,1104	0/0:18,0:18:45.15:0,45,714	0/0:24,0:24:66.21:0,66,1011	0/0:24,0:24:69.23:0,69,1091	0/0:28,0:28:78.25:0,78,1211	0/0:22,0:22:66.23:0,66,1052	0/0:24,0:24:72.25:0,72,1151	0/0:9,0:9:24.08:0,24,383	0/0:17,0:17:48.13:0,48,738	1/1:0,14:14:39.13:545,39,0	1/1:0,21:20:60.20:838,60,0	1/1:0,30:29:81.27:1133,81,0	0/0:21,1:20:48.16:0,48,756	0/0:23,4:23:57.19:0,57,899	0/0:14,0:14:42.13:0,42,644	0/0:29,0:29:87.30:0,87,1386	1/1:0,28:28:78.26:1091,78,0	1/1:0,24:24:66.22:922,66,0	1/1:1,9:9:27.08:363,27,0
chr10	44813108	.	G	GT	7937.68	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=4.157;DP=597;FS=24.949;HRun=6;HaplotypeScore=79.6628;InbreedingCoeff=0.9872;MQ=66.11;MQ0=2;MQRankSum=-1.912;QD=27.37;ReadPosRankSum=2.030;VQSLOD=3.1757;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,28:22:54.17:678,54,0	0/0:10,0:9:24.05:0,24,245	0/0:34,0:34:87.10:0,87,855	0/0:27,0:26:58.54:0,59,565	1/1:1,30:29:81.26:1018,81,0	0/0:20,0:20:54.12:0,54,551	0/0:20,0:20:48.10:0,48,490	0/0:31,0:31:87.16:0,87,869	0/0:23,0:23:66.11:0,66,663	0/0:22,0:21:63.14:0,63,643	0/0:18,0:18:45.10:0,45,459	1/1:1,16:17:42.13:528,42,0	1/1:1,15:16:45.14:566,45,0	1/1:2,10:11:27.04:322,27,0	0/0:17,0:17:48.09:0,48,482	0/0:28,0:28:60.13:0,60,612	1/1:2,19:20:54.17:679,54,0	0/0:18,0:17:42.03:0,42,410	1/1:6,5:10:12.04:151,12,0	1/1:5,19:18:42.13:528,42,0	1/1:1,16:15:39.12:491,39,0	1/1:2,14:14:33.11:415,33,0	1/1:4,20:23:60.16:736,60,0	1/1:1,15:16:42.13:528,42,0	0/0:39,0:38:99:0,111,1124	1/1:4,22:22:29.52:656,30,0	1/1:1,21:19:42.13:528,42,0	1/1:0,4:3:9.03:113,9,0
chr10	44813651	.	T	TA	2880.62	PASS	AC=14;AF=0.269;AN=52;BaseQRankSum=11.082;DP=553;FS=8.035;HRun=5;HaplotypeScore=59.3065;InbreedingCoeff=0.9942;MQ=40.06;MQ0=98;MQRankSum=2.438;QD=22.86;ReadPosRankSum=1.288;VQSLOD=2.2568;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:23:57.14:0,57,611	0/0:7,0:7:15.03:0,15,161	./.	./.	0/0:20,0:20:33.08:0,33,354	0/0:22,0:21:48.12:0,48,516	0/0:22,0:19:51.11:0,51,540	0/0:26,0:17:39.09:0,39,412	0/0:28,0:26:48.12:0,48,515	0/0:23,0:20:57.14:0,57,613	0/0:22,0:20:45.11:0,45,483	1/1:0,15:14:33.11:433,33,0	1/1:1,15:10:24.08:316,24,0	1/1:2,14:13:30.10:390,30,0	0/0:21,0:21:45.46:0,45,483	0/0:16,0:16:39.09:0,39,418	1/1:2,19:18:39.10:495,39,0	0/0:16,0:13:30.08:0,30,322	0/0:14,0:11:30.04:0,30,310	0/0:21,0:21:60.12:0,60,628	0/0:24,0:18:42.10:0,42,450	1/1:3,11:12:27.09:355,27,0	1/1:3,18:20:48.16:631,48,0	1/1:2,21:17:36.07:453,36,0	0/0:23,0:23:69.17:0,69,741	0/0:19,0:11:30.07:0,30,322	0/0:7,0:6:18.05:0,18,193	0/0:12,0:10:27.07:0,27,290
chr10	44813725	.	AAC	A	429.63	PASS	AB=0.800;AC=34;AF=0.739;AN=46;BaseQRankSum=2.450;DP=380;FS=5.073;HRun=0;HaplotypeScore=77.7303;InbreedingCoeff=0.2296;MQ=69.76;MQ0=11;MQRankSum=-1.533;QD=1.68;ReadPosRankSum=1.905;VQSLOD=1.2966;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:16:2.84:14,3,0	./.	./.	./.	1/1:12,0:15:2.84:14,3,0	0/0:17,0:17:11.48:0,11,175	1/1:14,0:14:5.67:35,6,0	0/0:21,0:21:0:0,0,0	0/1:16,1:16:5.18:5,0,87	1/1:21,0:20:2.50:9,2,0	1/1:13,0:16:5.68:28,6,0	1/1:5,0:7:2.84:14,3,0	1/1:4,0:6:5.68:28,6,0	1/1:7,0:9:2.84:14,3,0	1/1:6,2:8:3.01:32,3,0	1/1:10,2:12:8.86:78,9,0	0/0:11,0:12:9.01:0,9,88	1/1:14,4:18:5.26:63,5,0	1/1:7,0:8:2.84:14,3,0	1/1:13,0:14:2.84:14,3,0	./.	0/0:7,0:7:0:0,0,0	1/1:16,0:18:2.84:14,3,0	0/0:8,0:8:0:0,0,0	0/1:10,11:21:25.86:141,0,26	1/1:16,0:13:2.84:14,3,0	1/1:7,0:10:2.84:14,3,0	./.
chr10	44813809	.	ATATC	A	3651.82	PASS	AB=1.000;AC=27;AF=0.482;AN=56;BaseQRankSum=11.982;DP=408;FS=19.548;HRun=0;HaplotypeScore=117.3185;InbreedingCoeff=0.7364;MQ=65.53;MQ0=2;MQRankSum=-8.341;QD=20.29;ReadPosRankSum=2.539;VQSLOD=2.0598;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:12,0:12:6.12:152,0,6	0/0:8,0:8:21.06:0,21,493	0/0:18,0:16:5.09:0,5,266	0/0:24,0:14:18.95:0,19,307	1/1:17,0:15:14.89:171,15,0	0/0:25,0:25:58.94:0,59,1420	0/0:6,0:6:11.96:0,12,249	0/0:32,0:32:90.24:0,90,1966	0/0:18,0:18:48.12:0,48,1154	0/0:19,0:19:48.16:0,48,1119	0/0:12,0:12:27.01:0,27,588	1/1:5,9:14:34.81:485,35,0	1/1:0,12:12:26.98:415,27,0	1/1:5,6:11:11.72:215,12,0	0/0:9,0:9:24.08:0,24,612	0/0:18,0:18:51.16:0,51,1196	1/1:3,8:11:21.51:332,22,0	0/0:20,0:20:45.15:0,45,1137	1/1:15,0:14:36.57:433,37,0	0/1:8,0:7:10.97:64,0,11	1/1:8,0:8:9:105,9,0	1/1:4,4:8:9.88:164,10,0	1/1:5,5:8:11.94:119,12,0	1/1:1,8:8:11.97:180,12,0	0/0:19,0:19:48.15:0,48,1148	0/1:15,0:14:40.75:334,0,41	1/1:25,0:25:23.31:409,23,0	1/1:5,0:5:6.02:74,6,0
chr10	44813817	.	CTATT	C	3980.85	PASS	AB=0.883;AC=26;AF=0.464;AN=56;BaseQRankSum=10.542;DP=374;FS=3.520;HRun=0;HaplotypeScore=99.5294;InbreedingCoeff=0.6252;MQ=61.08;MQ0=2;MQRankSum=-6.602;QD=23.98;ReadPosRankSum=3.435;VQSLOD=3.3699;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,13:14:12.92:281,13,0	0/0:8,0:8:24.04:0,24,553	0/0:12,0:10:16.44:0,16,370	0/0:17,0:11:8.03:0,8,190	1/1:1,12:13:15.05:284,15,0	0/0:22,0:22:66.06:0,66,1432	0/0:5,0:5:12.04:0,12,294	0/0:31,0:31:90.28:0,90,2039	0/0:17,0:17:48.16:0,48,1212	0/0:20,0:20:54.17:0,54,1301	0/0:15,0:15:30.01:0,30,635	1/1:12,0:12:24.03:257,24,0	0/1:13,0:13:47.91:212,0,48	0/1:7,0:7:22.22:123,0,22	0/0:10,0:10:27.09:0,27,716	0/0:18,0:18:51.16:0,51,1235	1/1:11,0:11:18.46:184,18,0	0/0:17,0:17:51.16:0,51,1248	1/1:3,11:13:39.11:696,39,0	1/1:1,8:8:5.69:112,6,0	1/1:0,7:7:7.74:168,8,0	0/1:4,0:4:7.93:90,0,8	1/1:6,0:4:2.99:34,3,0	1/1:10,0:9:8.25:99,8,0	0/0:16,0:16:45.15:0,45,1173	0/1:2,15:17:32.92:661,0,33	1/1:2,19:21:38.96:667,39,0	1/1:0,8:8:6.02:113,6,0
chr10	44813837	.	GTA	G	1294.76	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=6.726;DP=412;FS=14.095;HRun=0;HaplotypeScore=109.7181;InbreedingCoeff=0.9245;MQ=62.62;MQ0=0;MQRankSum=-7.380;QD=17.74;ReadPosRankSum=0.132;VQSLOD=2.8488;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:21.04:0,21,231	0/0:8,0:8:21.07:0,21,352	0/0:14,0:11:20.90:0,21,310	0/0:12,0:11:14.26:0,14,145	0/0:11,0:10:12.04:0,12,145	0/0:25,0:25:66.23:0,66,1130	0/0:7,0:7:15.05:0,15,257	0/0:39,0:39:99:0,111,1812	0/0:14,0:14:42.14:0,42,705	0/0:26,0:26:72.19:0,72,1125	0/0:17,0:17:33.11:0,33,564	1/1:3,8:11:18.06:236,18,0	1/1:3,14:17:39.11:496,39,0	1/1:2,7:9:20.91:241,21,0	0/0:15,0:15:39.13:0,39,654	0/0:17,0:17:51.17:0,51,866	1/1:7,5:12:15.05:195,15,0	0/0:16,0:16:42.14:0,42,699	0/0:16,0:16:39.11:0,39,447	0/0:10,0:8:8.94:0,9,109	0/0:7,0:7:14.96:0,15,154	1/1:2,4:6:9.03:118,9,0	1/1:2,3:3:6.02:78,6,0	1/1:4,9:12:8.99:118,9,0	0/0:14,0:13:36.02:0,36,581	0/0:18,0:18:48.13:0,48,568	0/0:24,0:24:50.79:0,51,524	0/0:13,0:13:18.06:0,18,218
chr10	44813907	.	AG	A	5439.36	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=12.901;DP=557;FS=1.184;HRun=1;HaplotypeScore=102.5694;InbreedingCoeff=0.9994;MQ=84.78;MQ0=0;MQRankSum=-4.897;QD=39.42;ReadPosRankSum=5.765;VQSLOD=4.7056;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:45.11:0,45,668	0/0:10,0:10:30.06:0,30,451	0/0:24,0:24:62.10:0,62,995	0/0:17,0:17:45.15:0,45,705	0/0:23,0:22:57.19:0,57,906	0/0:19,0:19:57.17:0,57,865	0/0:11,0:11:33.11:0,33,522	0/0:33,0:33:99:0,99,1489	0/0:19,0:19:57.19:0,57,911	0/0:26,0:26:78.27:0,78,1241	0/0:20,0:20:51.17:0,51,796	1/1:0,23:23:69.23:963,69,0	1/1:0,16:16:45.08:604,45,0	1/1:0,24:24:69.23:964,69,0	0/0:20,0:20:60.20:0,60,959	0/0:21,0:21:63.21:0,63,1005	1/1:0,24:24:69.23:963,69,0	0/0:10,0:10:30.10:0,30,479	0/0:26,0:26:75.25:0,75,1187	0/0:26,0:22:60.20:0,60,957	0/0:9,0:9:24.08:0,24,383	1/1:0,15:15:45.15:627,45,0	1/1:1,14:15:45.11:606,45,0	1/1:0,21:21:51.17:712,51,0	0/0:14,0:13:42.14:0,42,668	0/0:21,0:21:60.20:0,60,957	0/0:24,0:24:60.20:0,60,957	0/0:30,0:30:69.24:0,69,1102
chr10	44814162	.	T	TACACACAC	3735.43	PASS	AB=0.809;AC=36;AF=0.750;AN=48;BaseQRankSum=5.093;DP=553;FS=10.983;HRun=0;HaplotypeScore=189.8315;InbreedingCoeff=0.6543;MQ=57.70;MQ0=7;MQRankSum=-3.893;QD=9.46;ReadPosRankSum=-2.253;VQSLOD=1.2952;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:38,0:38:12.61:151,13,0	1/1:6,0:6:6.01:75,6,0	0/1:31,0:21:0:0,0,0	0/0:28,0:17:6.02:0,6,77	1/1:21,0:21:3.01:71,3,0	0/0:15,0:19:26.58:0,27,373	0/0:18,0:20:29.99:0,30,667	1/1:26,0:23:15.49:260,15,0	0/0:24,0:24:27.09:0,27,639	1/1:6,0:23:26.58:496,27,0	1/1:16,0:16:9.03:211,9,0	./.	1/1:12,0:12:8.72:60,9,0	./.	0/1:8,7:21:0:0,0,0	1/1:6,1:18:6.02:184,6,0	1/1:12,0:11:4.83:101,5,0	1/1:9,4:13:9.92:371,10,0	1/1:22,0:19:19.30:346,19,0	1/1:22,0:21:11.99:122,12,0	1/1:43,0:43:0.89:2,1,0	./.	./.	0/0:17,0:17:0:0,0,0	1/1:10,1:23:3.01:72,3,0	1/1:18,0:16:37.94:556,38,0	1/1:13,0:13:18.26:257,18,0	1/1:16,0:16:24.03:398,24,0
chr10	44814172	.	C	CCCCCCCCA	4549.49	PASS	AB=0.993;AC=18;AF=0.321;AN=56;BaseQRankSum=7.991;DP=609;FS=3.372;HRun=0;HaplotypeScore=214.0387;InbreedingCoeff=0.2828;MQ=46.28;MQ0=8;MQRankSum=-8.028;QD=17.70;ReadPosRankSum=-2.024;VQSLOD=4.0372;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:40,0:39:11.08:11,0,383	0/0:6,0:6:15.05:0,15,373	0/0:33,0:20:60.12:0,60,1383	0/0:33,0:14:42.10:0,42,1002	0/0:24,0:24:2.42:0,2,386	0/0:24,0:24:55.66:0,56,1457	0/0:20,0:20:57.18:0,57,1486	0/0:24,0:21:63.17:0,63,1307	0/0:22,0:22:66.17:0,66,1673	0/0:26,0:26:50.53:0,51,1068	0/0:17,0:17:21.53:0,22,414	1/1:22,0:21:8.21:570,8,0	0/1:15,1:16:98.98:620,0,99	1/1:24,1:23:29.83:556,30,0	0/0:22,0:22:21.07:0,21,543	0/1:18,0:18:12.76:13,0,401	0/1:14,0:13:70.06:617,0,70	0/1:13,0:13:9.74:10,0,639	0/1:18,0:15:26.08:26,0,294	0/0:25,0:24:4.22:0,4,544	0/0:40,0:40:30.04:0,30,248	1/1:20,4:24:46.35:1310,46,0	1/1:11,0:11:6.60:106,7,0	1/1:18,1:19:20.76:498,21,0	0/0:22,0:21:23.90:0,24,478	0/1:21,0:17:65.29:65,0,541	0/0:14,0:14:18.94:0,19,448	0/1:16,0:16:99:147,0,220
chr10	44814178	.	C	CCA	893.73	PASS	AB=0.950;AC=13;AF=0.232;AN=56;BaseQRankSum=9.752;DP=616;FS=21.289;HRun=0;HaplotypeScore=163.6216;InbreedingCoeff=0.4074;MQ=41.75;MQ0=11;MQRankSum=-6.139;QD=4.61;ReadPosRankSum=-3.511;VQSLOD=0.9190;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:41,0:40:19.07:19,0,150	0/0:7,0:7:18:0,18,184	0/0:29,0:12:32.70:0,33,444	0/0:35,0:12:33.11:0,33,484	0/0:24,0:24:17.88:0,18,254	0/0:24,0:24:52.60:0,53,753	0/0:20,0:20:52.96:0,53,767	0/0:20,0:17:51.12:0,51,730	0/0:23,0:23:57.85:0,58,937	0/0:25,0:25:43.09:0,43,546	0/0:17,0:17:20.95:0,21,274	0/1:23,2:24:84.36:91,0,84	0/1:15,4:19:95.04:182,0,95	1/1:20,4:22:16.11:158,16,0	0/0:22,0:22:18.04:0,18,253	0/0:21,0:21:28.96:0,29,356	0/1:13,0:12:16.44:16,0,133	0/0:16,0:16:35.72:0,36,457	0/0:16,0:13:10.01:0,10,216	0/0:24,0:24:9.77:0,10,311	0/0:43,0:42:6.23:0,6,36	1/1:23,4:27:33.09:390,33,0	1/1:10,2:12:2.98:21,3,0	1/1:7,11:19:12.03:135,12,0	0/0:20,0:19:17.98:0,18,241	0/0:21,0:17:9.01:0,9,309	0/0:14,0:14:24.46:0,24,184	0/1:14,0:14:50.66:51,0,81
chr10	44814180	.	C	CCA	117.11	PASS	AB=0.861;AC=6;AF=0.107;AN=56;BaseQRankSum=6.126;DP=630;FS=8.519;HRun=0;HaplotypeScore=168.3170;InbreedingCoeff=0.5014;MQ=42.00;MQ0=11;MQRankSum=-3.823;QD=1.43;ReadPosRankSum=-1.765;VQSLOD=1.7213;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:40:32.96:0,33,312	0/0:8,0:8:18.01:0,18,199	0/0:29,0:11:20.70:0,21,385	0/0:37,0:13:36.12:0,36,524	0/0:25,0:25:26.92:0,27,335	0/0:24,0:24:55.59:0,56,780	0/0:19,0:19:52.71:0,53,785	0/0:23,0:19:54.12:0,54,758	0/0:24,0:24:65.61:0,66,1006	0/0:27,0:27:49.19:0,49,619	0/0:17,0:17:20.95:0,21,284	0/0:26,0:25:14.58:0,15,150	0/0:19,0:19:17.47:0,17,153	1/1:23,0:22:5.02:16,5,0	0/0:22,0:22:18.06:0,18,271	0/0:22,0:22:25.97:0,26,337	0/1:8,5:12:99:189,0,115	0/0:16,0:16:38.70:0,39,499	0/0:17,0:14:19.71:0,20,366	0/0:25,0:24:26.63:0,27,330	0/0:45,0:44:20.66:0,21,184	1/1:27,0:27:0.73:5,1,0	0/0:12,0:12:2.80:0,3,13	0/1:19,0:19:0.34:1,0,0	0/0:20,0:19:8.90:0,9,192	0/0:22,0:18:33.99:0,34,433	0/0:14,0:14:35.09:0,35,309	0/0:14,0:14:30.77:0,31,286
chr10	44814187	.	A	ACG	1261.06	PASS	AB=0.981;AC=17;AF=0.304;AN=56;BaseQRankSum=4.336;DP=650;FS=11.756;HRun=0;HaplotypeScore=171.8552;InbreedingCoeff=0.1189;MQ=42.41;MQ0=10;MQRankSum=-0.394;QD=4.30;ReadPosRankSum=2.195;VQSLOD=2.4656;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:44,0:43:6.78:238,7,0	0/0:10,0:10:22.80:0,23,173	0/0:26,0:11:26.59:0,27,231	0/0:41,0:17:47.84:0,48,427	0/1:27,0:27:17:168,0,17	0/0:24,0:25:36.87:0,37,545	0/0:19,0:19:33.93:0,34,567	0/0:27,0:23:64.88:0,65,536	0/0:27,0:27:74.51:0,75,803	0/0:25,0:25:12.50:0,12,268	0/0:18,0:18:17.67:0,18,129	0/1:27,0:26:30.64:41,0,31	0/1:19,0:19:45.38:45,0,55	1/1:25,0:25:3.74:12,4,0	0/0:21,0:21:14.98:0,15,124	0/0:21,0:21:14.40:0,14,186	0/1:13,0:12:32.60:33,0,46	0/0:15,0:15:22.52:0,23,215	0/1:17,0:14:46.35:152,0,46	1/1:25,0:24:26.72:286,27,0	0/0:25,25:49:5.72:0,6,69	0/1:24,0:28:8.80:18,0,9	0/0:14,0:14:0:0,0,0	1/1:17,0:18:0.18:1,0,0	0/0:18,0:17:8.99:0,9,76	0/1:21,0:17:39.39:206,0,39	0/1:14,0:14:97.70:138,0,98	0/1:13,0:13:45.53:83,0,46
chr10	44814200	.	CGT	C	293.11	PASS	AB=0.918;AC=8;AF=0.143;AN=56;BaseQRankSum=7.279;DP=639;FS=48.854;HRun=0;HaplotypeScore=166.9264;InbreedingCoeff=0.0514;MQ=46.12;MQ0=8;MQRankSum=-4.763;QD=2.46;ReadPosRankSum=0.735;VQSLOD=1.3539;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,2:40:38.63:0,39,629	0/1:9,2:11:7:7,0,354	0/0:38,0:17:50.41:0,50,717	0/0:43,0:24:64.46:0,64,865	0/0:24,2:26:32.70:0,33,526	0/0:25,1:26:32.12:0,32,892	0/0:18,0:18:49.71:0,50,872	0/0:23,4:23:7.51:0,8,889	0/0:30,0:30:63.40:0,63,1435	0/1:27,0:27:51.97:52,0,699	0/1:15,0:15:62.26:62,0,326	0/0:23,0:22:11.28:0,11,36	1/1:17,0:16:6.69:86,7,0	0/0:25,0:24:15.20:0,15,53	0/0:23,1:24:33.11:0,33,530	0/0:20,0:20:31.79:0,32,450	0/0:10,0:9:0.19:0,0,13	0/0:11,0:11:26.20:0,26,358	0/0:15,1:16:1.77:0,2,535	0/0:23,3:25:38.79:0,39,632	0/0:46,1:46:14.46:0,14,225	0/0:26,0:26:7.81:0,8,24	0/0:12,1:13:5.98:0,6,18	0/0:16,1:17:0.34:0,0,1	0/1:14,1:14:30.21:30,0,124	0/1:19,2:17:90.46:90,0,529	0/0:12,2:14:6.38:0,6,323	0/1:10,3:13:95.23:95,0,202
chr10	44814209	.	A	ATATG	470.58	PASS	AB=0.846;AC=6;AF=0.107;AN=56;BaseQRankSum=5.257;DP=705;FS=8.725;HRun=0;HaplotypeScore=221.0129;InbreedingCoeff=0.2682;MQ=47.33;MQ0=7;MQRankSum=-4.931;QD=3.89;ReadPosRankSum=-0.369;VQSLOD=1.5751;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:51.18:0,51,1061	0/0:12,0:12:27.98:0,28,568	0/0:44,0:20:7.92:0,8,916	0/0:49,0:30:76.54:0,77,1304	0/0:26,0:26:36.12:0,36,753	0/0:25,0:25:60.21:0,60,1209	0/0:19,0:19:51.14:0,51,960	0/0:30,0:27:78.22:0,78,1538	0/0:29,0:29:84.08:0,84,1697	0/0:27,0:27:63.18:0,63,1222	0/0:15,0:15:27.09:0,27,566	0/1:23,7:30:99:195,0,111	0/1:20,5:24:99:199,0,108	1/1:27,9:35:2.70:20,3,0	0/0:23,0:23:42.14:0,42,860	0/0:21,0:21:38.98:0,39,729	0/1:11,1:11:99:166,0,192	0/0:12,0:12:33.11:0,33,650	0/0:18,0:17:48.16:0,48,960	0/0:29,0:28:48.16:0,48,980	0/0:49,0:48:21.07:0,21,441	0/0:27,4:31:2.99:0,3,63	0/1:14,4:18:0.07:0,0,0	0/0:22,0:22:0:0,0,0	0/0:14,0:13:15.05:0,15,315	0/0:19,0:17:47.88:0,48,770	0/0:15,0:15:42.10:0,42,761	0/0:17,0:17:30.02:0,30,471
chr10	44814304	.	T	TTTC	16530.75	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=14.561;DP=555;FS=5.548;HRun=0;HaplotypeScore=107.7497;InbreedingCoeff=0.9985;MQ=75.79;MQ0=0;MQRankSum=-7.196;QD=54.02;ReadPosRankSum=2.595;VQSLOD=7.3156;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,27:29:75.26:1678,75,0	0/0:9,0:9:21.06:0,21,323	0/0:28,0:28:71.49:0,71,1068	0/0:14,0:14:36.55:0,37,534	1/1:0,21:22:57.19:1247,57,0	0/0:20,0:20:60.19:0,60,965	0/0:18,0:18:51.12:0,51,784	0/0:27,0:27:75.24:0,75,1168	0/0:16,0:16:45.15:0,45,728	0/0:26,0:26:75.24:0,75,1170	0/0:20,0:20:60.19:0,60,942	1/1:0,13:14:27.09:603,27,0	1/1:0,11:11:30.10:660,30,0	1/1:1,19:20:48.16:1072,48,0	0/0:18,0:18:51.17:0,51,839	0/0:19,0:19:57.18:0,57,912	1/1:1,12:14:27.09:603,27,0	0/0:14,0:14:42.14:0,42,692	1/1:1,8:9:24.08:517,24,0	1/1:2,28:31:84.11:1703,84,0	1/1:0,25:25:63.22:1406,63,0	1/1:4,25:31:69.19:1480,69,0	1/1:1,25:27:75.15:1582,75,0	1/1:0,12:12:33.11:738,33,0	0/0:20,0:20:60.20:0,60,985	1/1:2,22:27:25.73:1432,26,0	1/1:2,17:19:48.16:1072,48,0	1/1:0,15:15:33.11:739,33,0
chr10	44814847	.	C	CT	4165.78	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-15.993;DP=552;FS=12.281;HRun=8;HaplotypeScore=97.8064;InbreedingCoeff=0.9639;MQ=66.77;MQ0=0;MQRankSum=1.383;QD=31.09;ReadPosRankSum=0.712;VQSLOD=2.1920;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:42:0,42,384	0/0:10,0:10:30.02:0,30,275	0/0:12,0:10:26.92:0,27,229	0/0:18,0:17:26.99:0,27,242	0/0:26,0:26:66:0,66,599	0/0:19,0:19:57.03:0,57,522	0/0:11,0:11:30.02:0,30,275	0/0:32,0:32:69.02:0,69,631	0/0:23,0:23:63.03:0,63,576	1/1:2,27:29:81.23:925,81,0	1/1:2,23:25:69.21:796,69,0	0/0:14,0:14:36:0,36,329	0/0:12,0:12:30:0,30,274	0/0:19,0:19:54.02:0,54,494	1/1:2,20:22:57.17:658,57,0	1/1:3,16:19:45.13:519,45,0	0/0:10,0:10:23.98:0,24,220	1/1:0,23:24:72.18:817,72,0	0/0:20,0:20:53.99:0,54,494	0/0:35,0:35:90.02:0,90,819	0/0:10,0:10:27:0,27,247	0/0:20,0:20:57.03:0,57,521	0/0:29,0:29:78.03:0,78,714	0/0:21,0:21:50.99:0,51,467	1/1:1,14:15:39.12:450,39,0	0/0:27,1:28:46.42:0,46,679	0/0:29,0:29:81.01:0,81,735	0/0:3,0:3:2.98:0,3,27
chr10	44815615	.	C	CAT	12829.71	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=13.244;DP=524;FS=0.000;HRun=0;HaplotypeScore=95.1692;InbreedingCoeff=0.9976;MQ=87.71;MQ0=0;MQRankSum=-9.620;QD=48.78;ReadPosRankSum=4.071;VQSLOD=5.6805;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,15:16:33.11:653,33,0	0/0:8,0:8:18.06:0,18,293	0/0:26,0:26:71.78:0,72,1065	0/0:22,0:22:60.20:0,60,972	1/1:4,21:25:48.16:972,48,0	0/0:26,0:26:78.27:0,78,1259	0/0:20,0:20:60.20:0,60,974	0/0:27,0:27:75.17:0,75,1161	0/0:17,0:17:51.17:0,51,831	0/0:21,0:21:60.20:0,60,951	0/0:14,0:14:42.14:0,42,684	1/1:3,15:19:39.13:781,39,0	1/1:1,13:14:36.12:730,36,0	1/1:0,12:12:33.11:662,33,0	0/0:20,0:20:57.19:0,57,913	0/0:29,0:29:87.25:0,87,1378	1/1:0,14:15:42.14:852,42,0	0/0:6,0:6:18.06:0,18,293	1/1:1,13:14:33.09:598,33,0	1/1:3,23:26:57.20:1157,57,0	1/1:1,22:24:57.20:1156,57,0	1/1:1,19:20:54.19:1089,54,0	1/1:1,15:16:42.14:853,42,0	1/1:1,11:12:33.11:670,33,0	0/0:25,0:25:72.25:0,72,1174	1/1:3,15:18:45.15:900,45,0	1/1:0,18:18:48.16:973,48,0	1/1:0,13:14:39.13:783,39,0
chr10	44815875	.	GT	G	5046.60	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=12.595;DP=491;FS=8.965;HRun=4;HaplotypeScore=79.4166;InbreedingCoeff=0.9934;MQ=79.30;MQ0=0;MQRankSum=-4.461;QD=31.74;ReadPosRankSum=2.275;VQSLOD=5.2424;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,15:15:33.10:396,33,0	0/0:12,0:12:33.11:0,33,452	0/0:20,0:20:57.17:0,57,754	0/0:17,0:17:27.34:0,27,574	1/1:2,33:35:96.29:1151,96,0	0/0:29,0:29:78.23:0,78,1042	0/0:14,0:14:39.11:0,39,528	0/0:38,0:38:99:0,102,1366	0/0:14,0:14:42.14:0,42,587	0/0:28,0:28:81.25:0,81,1089	0/0:19,0:19:48.16:0,48,671	0/0:15,0:15:45.15:0,45,626	0/0:7,0:7:21.07:0,21,294	0/0:10,0:10:27.09:0,27,378	0/0:16,0:16:48.16:0,48,672	0/0:17,0:17:48.16:0,48,672	0/0:10,0:10:30.06:0,30,396	0/0:17,0:17:51.14:0,51,692	1/1:0,13:13:39.10:445,39,0	1/1:2,26:28:75.23:897,75,0	1/1:0,14:14:39.12:468,39,0	0/0:10,0:10:29.95:0,30,351	0/0:16,0:16:36.12:0,36,503	0/0:11,0:11:30.06:0,30,398	0/0:12,0:12:36.09:0,36,470	1/1:1,14:15:42.13:504,42,0	1/1:4,31:35:87.26:1043,87,0	1/1:0,4:4:12.04:144,12,0
chr10	44815995	.	G	GA	1144.81	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-9.629;DP=465;FS=8.035;HRun=6;HaplotypeScore=57.6038;InbreedingCoeff=0.9798;MQ=79.82;MQ0=0;MQRankSum=0.621;QD=32.71;ReadPosRankSum=-5.472;VQSLOD=1.2522;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:48.11:0,48,490	0/0:6,0:6:18.04:0,18,184	0/0:18,0:18:36.04:0,36,357	0/0:12,0:12:30.02:0,30,294	0/0:16,0:16:48.11:0,48,490	0/0:26,0:26:69.13:0,69,696	0/0:15,0:15:39.09:0,39,398	1/1:1,34:35:99:1240,102,0	0/0:17,0:17:51.10:0,51,514	0/0:13,0:13:33.07:0,33,337	0/0:16,0:16:36.08:0,36,367	0/0:15,0:15:42.06:0,42,414	0/0:14,0:14:39.09:0,39,397	0/0:14,0:14:36.08:0,36,366	0/0:16,0:16:48.08:0,48,481	0/0:12,0:12:36.08:0,36,367	0/0:18,0:18:48.07:0,48,479	0/0:8,0:8:20.80:0,21,213	0/0:24,0:24:60.12:0,60,606	0/0:27,0:27:75.15:0,75,758	0/0:8,0:8:24.05:0,24,245	0/0:8,0:8:21.05:0,21,214	0/0:28,0:28:81.18:0,81,826	0/0:13,0:13:33.07:0,33,337	0/0:14,0:14:39.09:0,39,398	0/0:12,0:12:36.08:0,36,367	0/0:30,0:30:87.20:0,87,887	0/0:11,0:11:33.08:0,33,337
chr10	44816138	.	A	AT	3734.14	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=8.413;DP=543;FS=1.933;HRun=2;HaplotypeScore=88.8108;InbreedingCoeff=0.9990;MQ=71.77;MQ0=0;MQRankSum=-3.081;QD=38.90;ReadPosRankSum=2.458;VQSLOD=4.0894;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:60.19:0,60,743	0/0:13,0:13:36.10:0,36,433	0/0:16,0:15:42.07:0,42,477	0/0:17,0:16:39.12:0,39,471	0/0:38,0:38:99:0,105,1300	0/0:29,0:29:84.26:0,84,1041	0/0:9,0:9:27.08:0,27,335	0/0:36,0:36:99:0,108,1329	0/0:14,0:14:42.13:0,42,520	0/0:23,0:23:66.21:0,66,818	0/0:13,0:13:36.11:0,36,446	1/1:1,10:11:27.09:379,27,0	1/1:0,9:9:27.09:381,27,0	1/1:2,10:12:30.10:423,30,0	0/0:21,0:21:60.19:0,60,744	0/0:17,0:17:51.16:0,51,632	1/1:2,20:22:60.20:844,60,0	0/0:19,0:19:57.18:0,57,705	0/0:20,0:20:57.16:0,57,689	0/0:31,0:31:93.28:0,93,1139	0/0:19,0:19:54.13:0,54,641	1/1:0,11:11:33.11:464,33,0	1/1:0,22:22:63.17:863,63,0	1/1:0,9:9:27.09:380,27,0	0/0:21,0:21:63.18:0,63,767	0/0:26,0:26:72.22:0,72,881	0/0:29,0:29:84.24:0,84,1016	0/0:14,0:14:42.13:0,42,520
chr10	44818565	.	A	AT	8641.67	PASS	AB=1.000;AC=31;AF=0.554;AN=56;BaseQRankSum=1.122;DP=463;FS=1.588;HRun=5;HaplotypeScore=51.1357;InbreedingCoeff=0.9366;MQ=67.35;MQ0=0;MQRankSum=0.663;QD=33.63;ReadPosRankSum=3.291;VQSLOD=5.1883;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,19:22:51.17:671,51,0	0/0:12,0:12:30.08:0,30,322	0/1:8,0:8:5.23:5,0,151	0/0:10,0:10:23.70:0,24,257	1/1:2,23:25:66.17:845,66,0	0/0:16,0:16:42.10:0,42,451	0/0:8,0:8:21.04:0,21,217	0/0:19,0:19:54.13:0,54,580	0/0:15,0:15:39.10:0,39,419	0/0:19,0:19:54.13:0,54,575	0/0:32,0:32:96.24:0,96,1028	1/1:2,8:10:30.10:392,30,0	1/1:0,12:12:33.11:434,33,0	1/1:0,10:10:30.10:395,30,0	0/0:10,0:10:27.07:0,27,290	0/0:13,0:13:36.09:0,36,387	1/1:0,15:15:36.12:474,36,0	0/0:23,0:23:39.61:0,40,648	1/1:2,14:16:39.13:513,39,0	1/1:1,32:33:90.29:1184,90,0	1/1:0,4:4:12.04:158,12,0	1/1:2,3:5:15.05:197,15,0	1/1:1,11:12:30.10:395,30,0	1/1:1,10:11:30.10:395,30,0	0/0:29,0:29:75.17:0,75,798	1/1:2,30:32:90.28:1168,90,0	1/1:2,18:20:54.17:706,54,0	1/1:3,19:22:54.18:711,54,0
chr10	44818658	.	TA	T	6223.59	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=-4.673;DP=448;FS=0.397;HRun=9;HaplotypeScore=53.1393;InbreedingCoeff=0.9244;MQ=67.71;MQ0=0;MQRankSum=-1.461;QD=21.76;ReadPosRankSum=1.768;VQSLOD=5.5123;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,10:13:30.90:276,31,0	0/0:0,0:10:28.41:0,28,144	0/0:8,0:7:7:0,7,85	0/1:8,0:8:1.15:1,0,92	1/1:5,24:29:81.04:739,81,0	0/0:20,0:20:48.13:0,48,546	0/0:4,0:4:12.04:0,12,138	0/0:27,0:27:66.19:0,66,753	0/0:13,0:13:27.08:0,27,312	1/1:4,10:14:30.01:274,30,0	1/1:1,27:28:69.02:629,69,0	0/0:2,0:16:31.25:0,31,159	0/0:5,0:17:38.96:0,39,190	0/0:0,0:9:25.57:0,26,130	1/1:1,11:12:27.01:247,27,0	1/1:1,6:7:18.01:165,18,0	0/0:1,0:5:9.02:0,9,54	1/1:8,16:24:34.31:398,34,0	1/1:2,11:13:12.21:254,12,0	1/1:3,24:28:74.07:665,74,0	1/1:1,11:12:30.02:275,30,0	0/0:1,0:13:28.41:0,28,144	0/0:1,0:15:40.05:0,40,218	0/0:0,0:5:11.36:0,11,58	1/1:4,18:22:48.01:439,48,0	1/1:4,25:29:81.02:735,81,0	1/1:1,34:35:90.05:823,90,0	1/1:1,11:12:33.02:302,33,0
chr10	44819021	.	T	TA	2997.67	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-0.767;DP=547;FS=3.843;HRun=7;HaplotypeScore=91.0049;InbreedingCoeff=0.9966;MQ=69.08;MQ0=1;MQRankSum=-1.233;QD=25.40;ReadPosRankSum=2.147;VQSLOD=4.1409;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:45.04:0,45,425	0/0:9,0:9:27.03:0,27,255	0/0:15,0:14:30.51:0,31,284	0/0:17,0:13:16.76:0,17,95	0/0:26,0:26:66.10:0,66,637	0/0:21,0:21:60.09:0,60,575	0/0:15,0:15:35.99:0,36,327	0/0:30,0:30:78.08:0,78,733	0/0:24,0:24:66.09:0,66,632	0/0:16,0:16:42.06:0,42,405	0/0:24,0:24:60.09:0,60,576	1/1:3,9:12:27.08:326,27,0	1/1:3,14:17:36.04:416,36,0	1/1:3,11:14:32.95:360,33,0	0/0:26,0:26:69.03:0,69,645	0/0:18,0:18:51.08:0,51,492	1/1:4,17:21:44.95:502,45,0	0/0:13,0:13:36.02:0,36,334	0/0:28,0:29:71.07:0,71,652	0/0:30,0:30:66.08:0,66,631	0/0:11,0:11:33.04:0,33,314	1/1:3,23:26:69.04:795,69,0	1/1:4,17:21:45.14:543,45,0	1/1:0,7:7:21.06:254,21,0	0/0:26,0:26:69.10:0,69,662	0/0:15,0:15:36.06:0,36,347	0/0:30,0:30:75.07:0,75,714	0/0:16,0:16:45.07:0,45,434
chr10	44819212	.	GA	G	1790.56	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=15.331;DP=425;FS=7.040;HRun=4;HaplotypeScore=185.2669;InbreedingCoeff=0.9842;MQ=83.02;MQ0=1;MQRankSum=-15.019;QD=8.07;ReadPosRankSum=2.360;VQSLOD=0.2713;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:17,4:19:31.31:133,31,0	0/0:3,0:3:9.03:0,9,119	0/0:19,0:19:57.19:0,57,783	0/0:15,0:15:37.01:0,37,499	1/1:14,1:15:28.76:140,29,0	0/0:17,0:17:48.15:0,48,657	0/0:15,0:15:42.13:0,42,573	0/0:31,0:31:81.25:0,81,1091	0/0:27,1:28:45.37:0,45,1021	0/0:15,0:15:45.15:0,45,624	0/0:10,0:10:30.09:0,30,405	1/1:9,0:9:22.46:80,22,0	1/1:15,0:15:37.93:147,38,0	1/1:19,0:19:44.25:167,44,0	0/0:14,0:13:39.13:0,39,539	0/0:19,0:19:45.14:0,45,630	1/1:15,1:16:25.94:113,26,0	0/0:11,0:11:24.08:0,24,336	1/1:21,1:22:35.78:210,36,0	1/1:12,1:13:30.86:116,31,0	1/1:4,3:7:17.02:148,17,0	1/1:8,2:10:22.90:106,23,0	1/1:8,0:8:17.30:81,17,0	1/1:7,1:8:17.98:82,18,0	0/0:6,0:6:18.06:0,18,252	1/1:21,0:21:36.28:150,36,0	1/1:29,1:29:63.46:258,63,0	1/1:8,0:8:17.29:90,17,0
chr10	44819214	.	AAACTTGTATTC	A	17940.65	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=12.873;DP=428;FS=8.317;HRun=0;HaplotypeScore=214.1005;InbreedingCoeff=0.9881;MQ=82.00;MQ0=1;MQRankSum=-14.964;QD=81.55;ReadPosRankSum=2.118;VQSLOD=3.8998;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,14:19:39.13:1319,39,0	0/0:3,0:3:9.03:0,9,512	0/0:19,0:19:57.15:0,57,2521	0/0:15,0:15:42.03:0,42,1738	1/1:2,13:15:33:989,33,0	0/0:17,0:17:48.16:0,48,2569	0/0:17,0:17:48.16:0,48,2237	0/0:35,0:35:96.32:0,96,4762	0/0:27,0:27:81.17:0,81,4397	0/0:15,0:15:45.15:0,45,2311	0/0:10,0:10:30.10:0,30,1746	1/1:0,9:9:27.09:979,27,0	1/1:1,14:15:45.14:1546,45,0	1/1:2,17:19:57.08:1886,57,0	0/0:14,0:13:39.13:0,39,2271	0/0:19,0:19:45.14:0,45,2506	1/1:6,10:16:33.10:1076,33,0	0/0:11,0:11:27.09:0,27,1385	1/1:10,11:21:57:1436,57,0	1/1:2,11:13:39.12:1258,39,0	1/1:4,3:7:20.96:445,21,0	1/1:5,5:10:30.08:739,30,0	1/1:1,7:8:21.07:753,21,0	1/1:2,6:8:21.07:702,21,0	0/0:6,0:6:18.06:0,18,988	1/1:5,15:20:56.97:1705,57,0	1/1:6,24:29:84.18:2697,84,0	1/1:5,3:8:20.95:413,21,0
chr10	44819267	.	TTATA	T	16439.81	PASS	AB=0.531;AC=41;AF=0.732;AN=56;BaseQRankSum=12.619;DP=400;FS=6.262;HRun=0;HaplotypeScore=166.7168;InbreedingCoeff=0.8808;MQ=70.50;MQ0=0;MQRankSum=-11.706;QD=55.35;ReadPosRankSum=4.039;VQSLOD=6.1796;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,26:26:69.24:1419,69,0	0/0:2,0:2:6.02:0,6,174	0/0:14,0:14:39.11:0,39,938	0/0:12,0:12:36.06:0,36,692	1/1:0,14:14:39:781,39,0	0/0:20,0:20:60.20:0,60,1621	0/0:14,0:14:42.14:0,42,1217	0/0:20,0:20:60.20:0,60,1678	0/0:21,0:21:63.20:0,63,1702	1/1:0,11:11:33.11:691,33,0	1/1:0,15:15:42.14:844,42,0	1/1:0,11:11:33.11:676,33,0	1/1:0,12:12:36.12:744,36,0	1/1:0,19:19:57.20:1178,57,0	1/1:0,17:17:48.16:991,48,0	0/1:2,15:17:49.59:708,0,50	1/1:0,19:19:54.18:1087,54,0	1/1:0,8:8:21.07:440,21,0	1/1:0,17:17:48.12:913,48,0	1/1:0,17:17:51.18:1040,51,0	1/1:0,11:11:12.04:239,12,0	1/1:0,10:10:24.08:501,24,0	1/1:0,12:11:30.08:626,30,0	1/1:1,7:8:18.06:370,18,0	1/1:0,7:7:18.06:360,18,0	1/1:0,17:17:51.15:1023,51,0	1/1:0,15:15:45.15:935,45,0	1/1:0,14:14:42.14:871,42,0
chr10	44819462	.	T	TTAATAATAA	1350.05	PASS	AB=1.000;AC=22;AF=0.550;AN=40;BaseQRankSum=-3.438;DP=205;FS=2.750;HRun=0;HaplotypeScore=64.4765;InbreedingCoeff=0.3680;MQ=53.52;MQ0=1;MQRankSum=-2.682;QD=11.07;ReadPosRankSum=-1.624;VQSLOD=1.5882;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:21.06:0,21,374	./.	./.	0/0:2,0:2:3:0,3,27	0/0:8,0:8:6.02:0,6,125	0/0:5,0:5:9.03:0,9,245	0/0:3,0:3:3.01:0,3,82	1/1:28,0:28:12.03:177,12,0	./.	1/1:8,1:10:6.02:212,6,0	1/1:4,1:5:6.02:239,6,0	1/1:5,0:5:3.01:37,3,0	./.	1/1:4,0:4:3.01:53,3,0	1/1:6,1:7:3.01:135,3,0	1/1:8,2:10:6.02:271,6,0	0/1:18,0:18:37.65:38,0,51	1/1:3,0:8:6.02:115,6,0	0/1:16,0:15:18.87:34,0,19	0/0:7,0:7:2.74:0,3,12	./.	./.	./.	./.	1/1:7,0:7:3.90:82,4,0	1/1:4,0:4:3.01:96,3,0	0/0:13,0:13:4.96:0,5,19	0/0:4,0:4:4.44:0,4,14
chr10	44819501	.	A	ATAT	1810.81	PASS	AB=1.000;AC=32;AF=0.593;AN=54;BaseQRankSum=7.388;DP=206;FS=4.969;HRun=0;HaplotypeScore=36.2285;InbreedingCoeff=0.5157;MQ=63.70;MQ0=3;MQRankSum=-0.533;QD=14.60;ReadPosRankSum=1.392;VQSLOD=2.7062;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:12:19.77:127,20,0	0/0:2,0:2:5.98:0,6,49	0/0:3,0:3:6:0,6,53	0/0:10,0:6:17.99:0,18,175	1/1:4,0:4:8.48:54,8,0	0/0:13,0:13:39.05:0,39,437	0/0:3,0:3:9.02:0,9,111	0/0:33,0:33:77.68:0,78,860	0/0:3,0:3:6:0,6,52	0/1:6,0:6:24.48:24,0,98	0/0:7,0:7:13.84:0,14,154	1/1:4,0:4:11.93:93,12,0	1/1:4,0:4:11.93:92,12,0	1/1:0,0:3:3.01:53,3,0	0/0:7,0:7:1.66:0,2,140	0/1:5,0:5:23.48:23,0,66	1/1:14,0:14:35.40:230,35,0	0/1:12,0:12:8.71:9,0,150	1/1:2,10:12:35.98:454,36,0	1/1:0,6:8:11.84:127,12,0	./.	1/1:4,0:4:8.99:75,9,0	1/1:2,0:2:5.98:47,6,0	1/1:6,0:6:17.79:130,18,0	0/1:2,0:2:10.10:10,0,22	1/1:6,0:6:18.01:162,18,0	1/1:0,7:7:6.02:146,6,0	1/1:0,8:10:6.02:144,6,0
chr10	44819887	.	T	TA	12732.46	PASS	AB=0.522;AC=29;AF=0.518;AN=56;BaseQRankSum=-9.512;DP=567;FS=8.550;HRun=2;HaplotypeScore=54.7681;InbreedingCoeff=0.9552;MQ=76.24;MQ0=0;MQRankSum=-3.446;QD=39.79;ReadPosRankSum=4.539;VQSLOD=4.8059;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,41:41:99:1771,123,0	0/0:10,0:10:30.09:0,30,372	0/0:24,0:24:63.17:0,63,752	0/0:26,0:26:74.77:0,75,862	1/1:1,28:29:78.18:1076,78,0	0/0:15,0:15:45.14:0,45,556	0/0:10,0:10:30.09:0,30,372	0/0:34,0:34:99:0,99,1206	0/0:20,0:20:57.18:0,57,707	0/0:29,0:29:87.27:0,87,1079	0/0:18,0:18:48.15:0,48,595	1/1:0,20:20:60.20:864,60,0	1/1:0,22:22:66.22:951,66,0	1/1:1,28:29:84.28:1197,84,0	0/0:16,0:16:48.15:0,48,595	0/0:13,0:13:39.12:0,39,484	1/1:1,15:16:42.14:605,42,0	0/0:15,0:15:36.11:0,36,446	1/1:3,19:22:48.16:685,48,0	1/1:0,19:19:57.11:774,57,0	1/1:0,20:20:60.20:864,60,0	1/1:1,12:13:33.11:475,33,0	1/1:0,16:16:45.15:648,45,0	1/1:1,18:19:48.16:691,48,0	0/0:17,0:17:48.15:0,48,595	0/1:2,22:24:2.17:878,0,2	1/1:0,20:20:57.19:821,57,0	1/1:0,10:10:30.10:432,30,0
chr10	44820091	.	G	GA	8975.51	PASS	AB=0.615;AC=29;AF=0.518;AN=56;BaseQRankSum=2.705;DP=537;FS=18.678;HRun=4;HaplotypeScore=74.2901;InbreedingCoeff=0.9257;MQ=78.37;MQ0=0;MQRankSum=-8.100;QD=33.12;ReadPosRankSum=4.469;VQSLOD=3.1544;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,31:33:81.23:1085,81,0	0/0:8,0:8:21.06:0,21,238	0/0:18,0:18:37.65:0,38,432	0/0:26,0:26:59.64:0,60,636	1/1:0,15:15:39.13:534,39,0	0/0:28,0:28:75.21:0,75,848	0/0:15,0:15:42.12:0,42,476	0/0:28,0:28:78.21:0,78,877	0/0:26,0:26:72.19:0,72,806	0/0:17,0:17:45.12:0,45,504	0/0:27,0:27:72.19:0,72,807	1/1:3,11:14:36.12:491,36,0	1/1:2,13:15:42.12:557,42,0	1/1:3,21:24:60.20:820,60,0	0/0:24,0:24:66.17:0,66,739	0/0:20,0:20:60.17:0,60,681	1/1:3,15:18:45.15:612,45,0	0/0:15,0:15:38.70:0,39,418	1/1:1,17:18:42.14:573,42,0	1/1:1,15:16:48.07:614,48,0	1/1:2,13:15:36.12:492,36,0	1/1:2,19:21:54.05:674,54,0	1/1:4,16:20:57.05:700,57,0	1/1:8,18:26:63.06:813,63,0	0/0:14,0:14:42.10:0,42,465	0/1:6,10:16:32.10:328,0,32	1/1:2,12:14:36.11:478,36,0	1/1:1,5:6:15.05:205,15,0
chr10	44820143	.	TA	T	2836.31	PASS	AC=12;AF=0.222;AN=54;BaseQRankSum=12.277;DP=495;FS=16.306;HRun=6;HaplotypeScore=86.6245;InbreedingCoeff=0.9961;MQ=79.03;MQ0=0;MQRankSum=-1.452;QD=27.27;ReadPosRankSum=3.024;VQSLOD=2.4665;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:60.16:0,60,770	0/0:10,0:10:24.07:0,24,303	0/0:16,0:16:44.94:0,45,543	0/0:18,0:19:53.89:0,54,622	0/0:14,0:14:40.90:0,41,488	0/0:28,0:28:84.27:0,84,1105	0/0:15,0:15:45.14:0,45,579	0/0:25,0:25:69.20:0,69,871	0/0:29,0:29:87.25:0,87,1114	0/0:21,0:21:63.20:0,63,817	0/0:29,0:29:78.25:0,78,1026	1/1:1,12:13:36.09:387,36,0	1/1:1,18:19:51.13:548,51,0	1/1:3,13:16:42.09:442,42,0	0/0:20,0:20:57.19:0,57,750	0/0:14,0:14:39.13:0,39,513	0/0:23,0:23:60.18:0,60,772	0/0:14,0:14:42.05:0,42,511	0/0:14,0:14:28.03:0,28,355	0/0:16,0:16:45.62:0,46,591	0/0:5,0:5:15.05:0,15,197	1/1:1,20:21:60.11:632,60,0	1/1:1,19:20:57.14:612,57,0	1/1:2,13:15:39.01:403,39,0	0/0:21,0:21:54.18:0,54,710	0/0:14,0:14:42.10:0,42,534	0/0:19,0:19:45.95:0,46,599	./.
chr10	44820823	.	C	CG	385.26	PASS	AC=12;AF=0.222;AN=54;BaseQRankSum=7.072;DP=623;FS=5.157;HRun=0;HaplotypeScore=63.9497;InbreedingCoeff=0.8644;MQ=63.10;MQ0=16;MQRankSum=-0.846;QD=3.63;ReadPosRankSum=2.737;VQSLOD=2.6685;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:53:99:0,152,2039	0/0:12,0:12:36.12:0,36,504	0/0:30,0:29:75.23:0,75,999	0/0:29,0:27:75.21:0,75,935	0/0:29,0:29:84.28:0,84,1174	0/0:22,0:22:66.22:0,66,923	0/0:21,0:21:63.14:0,63,857	0/0:23,4:23:69.23:0,69,965	0/0:24,0:24:72.24:0,72,1006	0/0:25,0:24:72.24:0,72,1006	0/0:24,0:24:69.22:0,69,945	1/1:3,14:5:5.03:31,5,0	1/1:0,15:3:4.83:19,5,0	1/1:2,17:4:8.68:33,9,0	0/0:26,0:26:78.23:0,78,1057	0/0:26,0:26:75.24:0,75,1032	1/1:23,3:24:43.40:372,43,0	0/0:20,0:20:54.18:0,54,755	0/0:21,0:21:60.20:0,60,838	0/0:24,0:24:69.23:0,69,965	0/0:25,0:25:75.25:0,75,1046	1/1:1,12:1:2.98:21,3,0	1/1:3,13:3:5.77:66,6,0	./.	0/0:20,0:20:60.20:0,60,839	0/0:25,0:25:75.25:0,75,1049	0/0:25,0:25:75.25:0,75,1047	0/0:5,0:5:15.05:0,15,210
chr10	44820825	.	TA	T	247.57	PASS	AB=0.500;AC=9;AF=0.167;AN=54;BaseQRankSum=7.722;DP=621;FS=1.861;HRun=1;HaplotypeScore=63.5047;InbreedingCoeff=0.7612;MQ=64.79;MQ0=16;MQRankSum=-2.041;QD=2.88;ReadPosRankSum=3.050;VQSLOD=-0.2006;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,133,2363	0/0:12,0:12:36.12:0,36,576	0/0:30,0:29:78.24:0,78,1163	0/0:29,0:27:75.11:0,75,1057	0/0:30,0:30:90.29:0,90,1415	0/0:23,0:23:69.24:0,69,1098	0/0:23,0:23:69.22:0,69,1071	0/0:22,4:22:66.21:0,66,1034	0/0:25,0:25:72.23:0,72,1123	0/0:26,0:25:72.25:0,72,1151	0/0:25,0:25:72.25:0,72,1149	0/1:0,14:2:0:0,0,0	1/1:0,15:3:2.22:7,2,0	1/1:2,17:4:2.98:10,3,0	0/0:24,0:24:72.25:0,72,1148	0/0:26,0:26:78.27:0,78,1245	1/1:22,3:23:45.49:335,45,0	0/0:21,0:21:57.19:0,57,911	0/0:21,0:21:63.18:0,63,955	0/0:24,0:24:69.24:0,69,1103	0/0:23,0:23:69.24:0,69,1100	1/1:1,12:1:2.84:14,3,0	0/0:1,13:1:1.82:0,2,5	./.	0/0:21,0:21:63.21:0,63,1005	0/0:25,0:25:75.26:0,75,1200	0/0:24,0:24:72.22:0,72,1101	0/0:6,0:6:18.06:0,18,282
chr10	44820961	.	GAC	G	2953.62	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=2.567;DP=680;FS=24.410;HRun=0;HaplotypeScore=157.4320;InbreedingCoeff=0.9987;MQ=72.90;MQ0=2;MQRankSum=-4.810;QD=25.03;ReadPosRankSum=2.163;VQSLOD=2.2644;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,144,2611	0/0:11,0:11:33.11:0,33,611	0/0:25,0:24:72.08:0,72,1267	0/0:24,0:24:69.21:0,69,1242	0/0:40,0:40:99:0,114,2035	0/0:18,0:18:54.15:0,54,938	0/0:30,0:30:87.25:0,87,1525	0/0:26,0:25:75.24:0,75,1343	0/0:27,0:27:75.23:0,75,1333	0/0:20,0:20:60.21:0,60,1116	0/0:12,0:12:36.11:0,36,643	1/1:0,17:13:30.06:409,30,0	1/1:0,15:12:27.09:397,27,0	1/1:2,16:16:39.13:574,39,0	0/0:30,0:30:90.30:0,90,1655	0/0:29,0:29:87.28:0,87,1588	0/0:34,0:33:96.33:0,96,1786	0/0:14,0:14:42.13:0,42,754	0/0:19,0:19:45.04:0,45,759	0/0:34,0:34:99:0,102,1806	0/0:20,0:19:54.19:0,54,979	1/1:3,24:27:51.09:749,51,0	1/1:2,24:26:48.16:705,48,0	1/1:0,15:11:21.07:308,21,0	0/0:24,0:24:72.23:0,72,1294	0/0:29,0:29:84.24:0,84,1486	0/0:31,0:31:87.09:0,87,1592	0/0:14,0:14:39.13:0,39,708
chr10	44821262	.	A	AT	2677.57	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-9.917;DP=566;FS=9.242;HRun=8;HaplotypeScore=64.0520;InbreedingCoeff=0.9413;MQ=71.43;MQ0=0;MQRankSum=0.755;QD=25.50;ReadPosRankSum=-0.337;VQSLOD=3.9595;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:60.01:0,60,543	0/0:11,0:10:27.01:0,27,247	0/0:15,0:14:3.37:0,3,190	0/0:11,0:10:5.36:0,5,87	0/0:35,0:32:84.03:0,84,768	0/0:20,0:20:57.02:0,57,517	0/0:19,0:19:41.99:0,42,384	0/0:17,0:17:45.01:0,45,404	0/0:19,0:19:44.99:0,45,407	0/0:31,0:29:81.04:0,81,741	0/0:24,0:24:60.03:0,60,549	1/1:2,10:12:27.08:312,27,0	1/1:3,20:23:54.16:623,54,0	1/1:1,19:20:48.14:554,48,0	0/0:18,0:18:51.02:0,51,467	0/0:24,0:24:66.01:0,66,600	0/0:17,0:17:45.02:0,45,412	0/0:6,0:6:18:0,18,160	0/0:19,0:18:36.01:0,36,330	0/0:41,0:41:99:0,102,929	0/0:24,0:24:63.01:0,63,571	1/1:4,20:23:54.63:623,55,0	1/1:3,13:15:42.11:475,42,0	1/1:1,9:10:24.07:277,24,0	0/0:22,0:21:60.02:0,60,549	0/0:27,0:27:75.04:0,75,686	0/0:30,0:30:87.05:0,87,796	0/0:7,0:7:21.01:0,21,192
chr10	44821538	.	T	TCATA	7360.20	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=15.312;DP=653;FS=1.289;HRun=0;HaplotypeScore=135.4428;InbreedingCoeff=0.9648;MQ=47.80;MQ0=43;MQRankSum=-13.931;QD=44.34;ReadPosRankSum=0.354;VQSLOD=5.3162;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,6:9:27.07:599,27,0	0/0:11,0:9:18.06:0,18,342	0/0:27,0:11:27.08:0,27,477	0/0:25,0:8:24.08:0,24,415	1/1:17,10:23:24.47:712,24,0	0/0:38,0:31:87.28:0,87,1619	0/0:23,0:20:60.21:0,60,1122	0/0:34,0:26:75.24:0,75,1361	0/0:26,0:19:54.19:0,54,1025	0/0:33,0:26:72.24:0,72,1339	0/0:20,0:20:48.16:0,48,911	0/0:19,0:18:48.16:0,48,895	0/0:16,0:16:48.13:0,48,846	0/0:23,0:21:57.18:0,57,1042	0/0:27,0:24:72.25:0,72,1367	0/0:20,0:20:60.21:0,60,1139	0/0:30,0:25:72.25:0,72,1364	0/0:21,0:19:54.17:0,54,994	1/1:5,10:14:36.05:781,36,0	1/1:7,13:18:42.14:1009,42,0	1/1:4,5:6:18.06:426,18,0	0/0:26,0:25:75.26:0,75,1424	0/0:25,0:23:66.21:0,66,1214	0/0:16,0:16:45.15:0,45,854	0/0:27,0:24:69.24:0,69,1303	1/1:12,15:26:3.20:1251,3,0	1/1:29,20:41:96.26:2208,96,0	1/1:5,3:7:15.05:376,15,0
chr10	44821542	.	G	GTGTAA	8086.93	PASS	AB=0.590;AC=15;AF=0.268;AN=56;BaseQRankSum=15.076;DP=633;FS=0.000;HRun=0;HaplotypeScore=132.1451;InbreedingCoeff=0.9190;MQ=48.12;MQ0=39;MQRankSum=-13.706;QD=55.77;ReadPosRankSum=0.843;VQSLOD=5.3354;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,6:12:26.99:575,27,0	0/0:12,0:10:24.07:0,24,447	0/0:28,0:10:30.10:0,30,643	0/0:22,0:9:26.58:0,27,508	1/1:11,10:17:29.09:652,29,0	0/0:39,0:32:90.31:0,90,1944	0/0:24,0:21:57.20:0,57,1228	0/0:36,0:29:78.26:0,78,1622	0/0:26,0:19:54.19:0,54,1173	0/0:32,0:25:75.26:0,75,1609	0/0:19,0:19:48.16:0,48,1027	0/0:22,0:21:54.17:0,54,1084	0/0:16,0:16:48.16:0,48,1030	0/0:19,0:17:51.16:0,51,1067	0/0:27,0:24:72.25:0,72,1563	0/0:21,0:21:63.21:0,63,1312	0/0:30,0:25:72.23:0,72,1510	0/0:21,0:19:54.18:0,54,1146	1/1:7,10:15:39.13:1146,39,0	1/1:8,13:19:51.12:1286,51,0	1/1:6,5:8:18.06:511,18,0	0/0:26,0:25:75.26:0,75,1628	0/0:24,0:22:66.21:0,66,1392	0/0:15,0:15:45.14:0,45,937	0/0:28,0:25:69.23:0,69,1433	0/1:7,16:21:4.94:1574,0,5	1/1:15,20:27:76.50:2086,77,0	1/1:1,3:3:9.03:258,9,0
chr10	44821971	.	AG	A	7089.62	PASS	AB=0.536;AC=17;AF=0.304;AN=56;BaseQRankSum=18.883;DP=665;FS=5.334;HRun=3;HaplotypeScore=103.5473;InbreedingCoeff=0.9147;MQ=85.57;MQ0=0;MQRankSum=-4.077;QD=33.28;ReadPosRankSum=2.516;VQSLOD=4.9165;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,51:52:99:1822,147,0	0/0:10,0:10:27.09:0,27,383	0/0:28,1:28:53.97:0,54,1028	0/0:20,0:20:52.98:0,53,699	1/1:1,22:23:57.18:702,57,0	0/0:26,0:26:75.25:0,75,1078	0/0:27,0:27:78.25:0,78,1106	0/0:26,0:26:72.23:0,72,1004	0/0:28,0:28:84.27:0,84,1190	0/0:30,0:30:84.28:0,84,1195	0/0:20,0:20:57.19:0,57,813	0/0:23,0:23:69.23:0,69,987	0/0:21,0:21:63.19:0,63,887	0/0:30,0:30:81.26:0,81,1142	0/0:29,0:29:81.23:0,81,1142	0/0:26,0:26:78.26:0,78,1121	1/1:1,22:23:60.19:744,60,0	0/0:24,0:24:69.23:0,69,985	1/1:0,16:14:42.13:521,42,0	1/1:2,22:24:63.20:781,63,0	1/1:0,30:30:81.25:1004,81,0	0/0:20,0:20:60.20:0,60,863	0/0:17,0:17:45.14:0,45,630	0/0:26,0:26:78.26:0,78,1123	0/0:20,0:20:57.17:0,57,786	0/1:2,13:15:41.28:438,0,41	1/1:0,23:23:66.21:818,66,0	1/1:0,7:7:21.07:260,21,0
chr10	44822305	.	AAAGTC	A	375.50	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.305;DP=698;FS=3.151;HRun=0;HaplotypeScore=152.9858;InbreedingCoeff=0.9979;MQ=69.49;MQ0=1;MQRankSum=-2.988;QD=26.82;ReadPosRankSum=0.570;VQSLOD=3.6951;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:87.30:0,87,2571	0/0:16,0:16:48.16:0,48,1413	0/0:28,0:28:78.26:0,78,2269	0/0:30,0:30:84.29:0,84,2319	0/0:21,0:21:60.20:0,60,1749	0/0:26,0:26:78.25:0,78,2339	0/0:23,0:23:63.20:0,63,1787	0/0:33,0:33:93.31:0,93,2754	0/0:22,0:22:63.22:0,63,1835	0/0:37,0:37:99:0,111,3316	0/0:26,0:26:66.23:0,66,1951	0/0:27,0:27:75.26:0,75,2225	0/0:18,0:17:48.16:0,48,1430	0/0:21,0:21:57.18:0,57,1528	0/0:28,0:28:75.26:0,75,2259	0/0:23,0:23:69.24:0,69,2032	1/1:2,12:14:24.08:469,24,0	0/0:17,0:17:48.16:0,48,1417	0/0:21,0:21:54.19:0,54,1586	0/0:24,0:24:69.24:0,69,2034	0/0:33,0:33:93.32:0,93,2878	0/0:24,0:24:72.25:0,72,2165	0/0:26,0:26:72.25:0,72,2071	0/0:21,0:21:57.16:0,57,1722	0/0:24,0:24:66.23:0,66,1898	0/0:26,0:26:78.27:0,78,2285	0/0:28,0:28:78.27:0,78,2353	0/0:31,0:31:93.32:0,93,2849
chr10	44824463	.	AAAC	A	2741.88	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=11.444;DP=355;FS=109.914;HRun=0;HaplotypeScore=87.4970;InbreedingCoeff=0.9178;MQ=65.70;MQ0=1;MQRankSum=-8.381;QD=24.48;ReadPosRankSum=3.252;VQSLOD=0.2426;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,10:5:9.03:106,9,0	1/1:0,4:4:12.04:147,12,0	0/0:24,0:24:69.10:0,69,1494	0/0:34,0:29:75.38:0,75,1609	1/1:0,10:10:17.81:214,18,0	0/0:20,0:20:54.19:0,54,1295	0/0:27,0:27:81.28:0,81,1980	1/1:0,9:6:18.06:227,18,0	0/0:11,0:9:24.08:0,24,555	1/1:0,14:14:42.13:516,42,0	1/1:0,10:10:27.08:316,27,0	0/0:27,0:27:63.22:0,63,1499	0/0:16,0:16:48.16:0,48,1146	0/0:17,0:17:48.13:0,48,1128	1/1:0,9:9:21.06:250,21,0	1/1:0,5:4:12.04:145,12,0	0/0:29,0:29:81.27:0,81,1876	1/1:1,5:5:12.04:152,12,0	1/1:0,3:3:9:101,9,0	1/1:0,6:6:18.05:215,18,0	1/1:2,4:4:6.02:70,6,0	0/0:9,0:9:27.09:0,27,649	0/0:6,0:6:18.06:0,18,444	0/0:23,0:23:57.16:0,57,1315	1/1:1,3:4:6.02:72,6,0	1/1:0,4:6:15.03:181,15,0	1/1:0,6:5:15.05:180,15,0	1/1:0,2:2:6.02:74,6,0
chr10	44824467	.	TG	T	1727.50	PASS	AB=0.538;AC=31;AF=0.554;AN=56;BaseQRankSum=11.488;DP=364;FS=79.778;HRun=1;HaplotypeScore=83.5985;InbreedingCoeff=0.8540;MQ=64.79;MQ0=1;MQRankSum=-7.394;QD=14.04;ReadPosRankSum=0.787;VQSLOD=0.2662;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,10:8:17.92:136,18,0	1/1:0,4:4:11.95:91,12,0	0/0:24,0:24:56.80:0,57,825	0/0:31,0:26:24.30:0,24,953	1/1:1,10:11:18.01:117,18,0	0/0:20,0:20:54.18:0,54,858	0/0:27,0:27:78.25:0,78,1221	1/1:2,9:8:20.96:170,21,0	0/0:13,0:11:24.08:0,24,383	1/1:0,14:14:41.82:321,42,0	1/1:1,10:11:29.77:211,30,0	0/0:26,0:26:63.21:0,63,1004	0/0:16,0:16:45.15:0,45,703	0/0:18,0:18:48.16:0,48,763	1/1:0,9:9:20.87:152,21,0	0/1:1,6:6:27.43:88,0,27	0/0:27,0:27:72.22:0,72,1120	1/1:2,5:7:17.19:127,17,0	1/1:2,3:3:5.99:50,6,0	1/1:0,6:6:17.88:130,18,0	1/1:2,4:5:5.95:42,6,0	0/0:9,0:9:27.09:0,27,431	0/0:6,0:6:18.06:0,18,288	0/0:24,0:24:54.18:0,54,851	1/1:0,3:3:5.97:44,6,0	1/1:3,4:7:15.38:115,15,0	1/1:0,6:5:14.91:110,15,0	1/1:0,2:2:5.98:46,6,0
chr10	44824525	.	T	TC	3191.30	PASS	AB=0.588;AC=13;AF=0.232;AN=56;BaseQRankSum=5.421;DP=551;FS=2.535;HRun=0;HaplotypeScore=102.3909;InbreedingCoeff=0.8491;MQ=50.92;MQ0=12;MQRankSum=-0.350;QD=20.33;ReadPosRankSum=0.696;VQSLOD=5.2463;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:35:81.27:0,81,1126	0/0:2,0:2:6.02:0,6,78	0/0:28,0:10:24.55:0,25,336	0/0:26,0:10:27.04:0,27,343	0/0:21,0:21:48.12:0,48,648	0/0:32,0:32:90.30:0,90,1237	0/0:28,0:28:81.18:0,81,1081	0/0:11,0:11:33.10:0,33,443	0/0:31,0:31:75.24:0,75,1030	0/0:15,0:14:42.14:0,42,580	0/0:16,0:16:44.31:0,44,541	1/1:0,19:19:36.11:419,36,0	0/1:6,14:18:82.21:313,0,82	1/1:2,19:22:35.47:570,35,0	0/0:12,0:12:36.12:0,36,503	0/0:15,0:14:42.10:0,42,561	1/1:7,0:22:50.36:242,50,0	0/0:17,0:16:48.12:0,48,648	0/0:15,0:10:30.10:0,30,416	0/0:12,0:12:36.03:0,36,454	0/0:14,0:13:34.67:0,35,465	1/1:2,17:19:50.93:539,51,0	1/1:2,9:11:24.87:278,25,0	1/1:5,39:43:74.87:1019,75,0	0/0:8,0:8:24.05:0,24,314	0/0:15,0:12:33.11:0,33,453	0/0:27,0:26:60.18:0,60,806	0/0:3,0:3:3.01:0,3,42
chr10	44824598	.	TC	T	3753.07	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=13.001;DP=561;FS=12.683;HRun=5;HaplotypeScore=93.7806;InbreedingCoeff=0.9330;MQ=49.20;MQ0=23;MQRankSum=-1.827;QD=20.40;ReadPosRankSum=0.182;VQSLOD=2.1620;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:14,44:50:20.34:1003,20,0	0/0:4,0:4:12.04:0,12,164	0/0:4,0:2:2.84:0,3,41	0/0:13,0:1:3.01:0,3,41	1/1:0,14:13:30.04:326,30,0	0/0:27,0:27:72.24:0,72,980	0/0:24,0:22:54.16:0,54,711	0/0:21,0:15:39.09:0,39,511	0/0:29,0:28:71.96:0,72,939	0/0:19,0:19:54.14:0,54,711	0/0:11,0:10:24.08:0,24,328	0/0:25,0:25:57.19:0,57,779	0/0:20,0:19:39.12:0,39,516	0/0:27,0:26:47.99:0,48,572	0/0:16,0:16:42.10:0,42,553	0/0:19,0:18:51.17:0,51,697	1/1:3,18:17:21.06:238,21,0	0/0:24,0:24:53.79:0,54,790	1/1:4,15:12:36.10:403,36,0	1/1:1,8:9:24.07:272,24,0	1/1:0,11:9:21.06:238,21,0	0/0:17,0:15:18.02:0,18,224	0/0:20,0:15:30.09:0,30,387	0/0:40,0:38:51.51:0,52,634	0/0:17,0:16:42.13:0,42,561	1/1:1,19:18:13.09:525,13,0	1/1:2,19:20:39.11:442,39,0	1/1:1,10:11:27.08:306,27,0
chr10	44825328	.	AG	A	8135.89	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=12.506;DP=640;FS=14.264;HRun=1;HaplotypeScore=67.3400;InbreedingCoeff=0.9999;MQ=79.38;MQ0=0;MQRankSum=-1.281;QD=39.49;ReadPosRankSum=0.249;VQSLOD=3.8915;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:78.27:0,78,1246	1/1:0,15:15:39.12:545,39,0	0/0:29,0:29:87.29:0,87,1375	0/0:19,0:19:57.11:0,57,845	0/0:38,0:38:99:0,111,1748	0/0:15,0:14:42.14:0,42,668	0/0:19,0:19:57.18:0,57,885	1/1:0,28:28:84.23:1122,84,0	0/0:15,0:15:45.14:0,45,696	1/1:0,34:34:99:1394,102,0	1/1:0,27:27:75.25:1048,75,0	0/0:20,0:20:60.20:0,60,959	0/0:16,0:16:48.15:0,48,741	0/0:21,0:21:63.21:0,63,1007	1/1:0,28:28:81.27:1132,81,0	1/1:0,29:29:75.25:1049,75,0	1/1:0,19:19:57.19:797,57,0	1/1:0,15:15:41.71:586,42,0	0/0:23,0:23:66.19:0,66,1003	0/0:32,0:32:96.31:0,96,1498	0/0:22,0:22:66.23:0,66,1052	0/0:20,0:20:60.20:0,60,958	0/0:23,0:23:69.20:0,69,1051	0/0:18,0:18:54.15:0,54,815	1/1:0,11:11:33.11:461,33,0	0/0:22,0:22:66.23:0,66,1055	0/0:39,0:39:99:0,117,1769	0/0:16,0:16:48.16:0,48,765
chr10	44826645	.	G	GA	12376.92	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=2.808;DP=541;FS=0.358;HRun=5;HaplotypeScore=62.7485;InbreedingCoeff=0.9947;MQ=61.72;MQ0=0;MQRankSum=-3.380;QD=33.27;ReadPosRankSum=0.216;VQSLOD=5.1836;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,25:28:69.19:889,69,0	1/1:1,7:8:18.06:237,18,0	0/0:11,0:11:23.89:0,24,239	0/0:8,0:8:14.86:0,15,138	1/1:2,29:31:78.20:992,78,0	0/0:19,0:19:57.12:0,57,604	0/0:9,0:9:27.07:0,27,290	1/1:3,23:26:69.21:893,69,0	0/0:22,0:22:57.12:0,57,604	1/1:2,33:35:99:1268,99,0	1/1:2,32:34:90.29:1184,90,0	0/0:11,0:11:33.08:0,33,355	0/0:16,0:16:42.11:0,42,451	0/0:13,0:13:39.10:0,39,419	1/1:3,8:11:21.07:276,21,0	1/1:1,15:16:42.14:553,42,0	0/0:19,0:19:48.12:0,48,518	1/1:7,19:26:54.11:675,54,0	1/1:3,15:18:45.11:573,45,0	1/1:2,41:43:99:1538,117,0	1/1:1,8:9:24.08:316,24,0	0/0:11,0:11:30.07:0,30,322	0/0:18,0:18:45.11:0,45,484	0/0:11,0:11:24.06:0,24,258	1/1:0,16:16:48.16:632,48,0	1/1:0,27:27:81.25:1052,81,0	1/1:3,25:28:72.23:944,72,0	1/1:0,16:16:27.09:355,27,0
chr10	44826839	.	AG	A	4126.71	PASS	AB=0.536;AC=15;AF=0.268;AN=56;BaseQRankSum=10.978;DP=572;FS=6.736;HRun=5;HaplotypeScore=73.2114;InbreedingCoeff=0.8827;MQ=60.79;MQ0=4;MQRankSum=-2.994;QD=25.79;ReadPosRankSum=0.285;VQSLOD=3.1599;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,36:36:84.24:952,84,0	0/0:4,0:4:12.04:0,12,164	0/0:19,0:17:39.13:0,39,533	0/0:26,0:22:26.93:0,27,636	1/1:3,16:18:42.12:476,42,0	0/0:14,0:14:39.13:0,39,534	0/0:15,0:15:45.15:0,45,616	0/0:30,0:30:78.26:0,78,1066	0/0:27,0:27:75.25:0,75,1019	0/0:20,0:20:45.15:0,45,615	0/0:20,0:20:54.18:0,54,738	0/0:21,0:21:60.19:0,60,804	0/0:21,0:21:51.17:0,51,697	0/0:21,0:21:57.18:0,57,762	0/0:19,0:19:36.12:0,36,492	0/0:18,0:18:48.08:0,48,615	0/0:39,0:39:99:0,107,1550	0/0:12,0:12:33.11:0,33,444	1/1:3,16:19:45.12:504,45,0	1/1:4,21:24:60.16:670,60,0	1/1:1,14:15:36.10:408,36,0	0/0:6,0:6:18.05:0,18,232	0/0:27,0:27:75.24:0,75,1011	0/0:31,0:31:90.26:0,90,1210	0/0:22,0:22:54.18:0,54,738	0/1:2,13:15:39.92:355,0,40	1/1:6,15:19:45.13:510,45,0	1/1:1,8:9:5.93:251,6,0
chr10	44826913	.	A	AAC	8315.75	PASS	AC=30;AF=0.556;AN=54;BaseQRankSum=15.425;DP=504;FS=18.655;HRun=0;HaplotypeScore=96.7512;InbreedingCoeff=0.9698;MQ=47.64;MQ0=5;MQRankSum=-15.961;QD=31.86;ReadPosRankSum=-3.889;VQSLOD=4.2270;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,15:14:21.07:379,21,0	1/1:1,7:7:12.04:214,12,0	0/0:8,0:7:21.07:0,21,317	0/0:18,0:11:20.77:0,21,291	1/1:5,17:14:30.06:482,30,0	0/0:25,0:25:75.22:0,75,1173	0/0:20,0:20:60.20:0,60,979	1/1:13,17:30:86.58:1341,87,0	0/0:20,0:20:60.19:0,60,943	1/1:3,14:17:48.16:879,48,0	1/1:5,18:23:36.09:581,36,0	0/0:22,0:22:66.23:0,66,1075	0/0:22,0:22:66.23:0,66,1071	0/0:15,0:15:45.15:0,45,734	1/1:3,22:24:36.01:587,36,0	1/1:3,18:21:51.16:872,51,0	0/0:33,0:33:99:0,99,1606	1/1:0,6:5:12.04:231,12,0	1/1:3,8:9:21.07:401,21,0	1/1:6,17:20:50.95:842,51,0	./.	0/0:9,0:9:27.09:0,27,440	0/0:20,0:20:60.20:0,60,973	0/0:29,0:29:87.28:0,87,1387	1/1:9,15:24:50.94:775,51,0	1/1:0,7:6:15.05:283,15,0	1/1:5,13:14:16.68:338,17,0	1/1:0,10:9:6.02:112,6,0
chr10	44826917	.	A	AT	5772.51	PASS	AB=0.541;AC=29;AF=0.537;AN=54;BaseQRankSum=15.553;DP=513;FS=15.165;HRun=0;HaplotypeScore=93.0094;InbreedingCoeff=0.8971;MQ=47.47;MQ0=8;MQRankSum=-14.629;QD=22.03;ReadPosRankSum=-0.142;VQSLOD=5.1531;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,16:14:21.06:291,21,0	1/1:0,8:7:12.04:162,12,0	0/0:13,0:7:20.97:0,21,242	0/0:18,0:11:17.98:0,18,220	1/1:2,19:13:21.07:283,21,0	0/0:25,0:25:75.25:0,75,1049	0/0:20,0:20:60.20:0,60,839	1/1:6,21:27:44.27:910,44,0	0/0:20,0:20:60.19:0,60,822	1/1:0,16:16:42.14:612,42,0	1/1:5,20:25:32.94:420,33,0	0/0:22,0:22:66.22:0,66,923	0/0:23,0:23:66.22:0,66,921	0/0:16,0:16:48.16:0,48,671	1/1:3,23:25:29.94:438,30,0	1/1:1,19:20:42.14:580,42,0	0/0:33,0:33:96.32:0,96,1342	1/1:0,6:5:12.04:178,12,0	1/1:3,9:9:18.06:278,18,0	1/1:4,19:20:48.15:642,48,0	./.	0/0:10,0:10:30.09:0,30,403	0/0:19,0:19:57.17:0,57,778	0/0:31,0:31:84.28:0,84,1175	1/1:0,22:22:33.10:442,33,0	1/1:1,7:7:15.05:218,15,0	0/1:3,17:16:16.64:232,0,17	1/1:0,12:9:6.02:86,6,0
chr10	44827009	.	A	AACATAC	5533.73	PASS	AB=0.784;AC=16;AF=0.286;AN=56;BaseQRankSum=12.418;DP=614;FS=19.414;HRun=0;HaplotypeScore=200.1462;InbreedingCoeff=-0.2139;MQ=54.04;MQ0=6;MQRankSum=-0.254;QD=14.76;ReadPosRankSum=3.156;VQSLOD=2.9350;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:13,0:16:99:202,0,172	1/1:1,1:9:24.08:529,24,0	0/0:14,0:11:4.07:0,4,279	0/0:10,0:7:18.04:0,18,288	0/1:29,0:31:99:661,0,131	0/0:21,0:22:66.19:0,66,1398	0/0:15,0:15:42.12:0,42,797	0/1:38,0:35:35:35,0,1132	0/0:26,0:27:75.23:0,75,1551	0/1:15,0:31:99:313,0,530	0/1:6,0:27:99:398,0,234	0/0:16,0:16:45.15:0,45,995	0/0:17,0:17:51.17:0,51,1086	0/0:17,0:17:51.17:0,51,987	0/1:8,0:18:91.52:92,0,326	0/1:5,0:16:99:150,0,150	0/0:29,0:29:84.28:0,84,1842	0/1:3,0:15:12.73:220,0,13	0/1:8,0:7:0.85:1,0,231	0/1:41,0:44:99:556,0,724	0/0:7,0:7:14.13:0,14,159	0/0:20,0:20:60.19:0,60,1202	0/0:27,0:27:81.27:0,81,1771	0/0:18,0:18:51.16:0,51,1093	0/1:13,0:27:75.45:480,0,75	0/1:19,0:25:99:652,0,425	0/1:36,0:37:99:696,0,715	0/1:24,0:24:99:550,0,191
chr10	44827093	.	C	CAA	6325.33	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-10.815;DP=491;FS=6.108;HRun=6;HaplotypeScore=59.5397;InbreedingCoeff=0.9874;MQ=62.07;MQ0=0;MQRankSum=-3.231;QD=43.62;ReadPosRankSum=-0.240;VQSLOD=3.8445;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,10:12:30.10:507,30,0	0/0:7,0:7:18.05:0,18,220	0/0:6,0:6:12.03:0,12,143	0/0:12,0:12:33.09:0,33,384	1/1:2,24:26:69.20:1137,69,0	0/0:20,0:20:48.62:0,49,586	0/0:15,0:15:17.34:0,17,451	0/0:38,0:38:99:0,102,1244	0/0:13,0:13:30.07:0,30,353	0/0:24,0:24:69.21:0,69,842	0/0:21,0:21:51.14:0,51,609	0/0:21,0:21:48.12:0,48,572	0/0:15,0:15:39.12:0,39,476	0/0:15,0:15:42.13:0,42,512	0/0:16,0:16:30.09:0,30,366	0/0:24,0:24:63.20:0,63,768	0/0:14,0:14:39.12:0,39,476	0/0:9,0:9:18.03:0,18,206	1/1:1,10:11:30.09:480,30,0	1/1:5,31:37:93.28:1543,93,0	1/1:0,6:6:18.06:304,18,0	0/0:13,0:13:39.11:0,39,464	0/0:35,0:35:93.26:0,93,1110	0/0:6,0:6:18.06:0,18,220	0/0:22,0:22:57.17:0,57,695	1/1:1,16:17:48.16:811,48,0	1/1:2,21:24:60.16:984,60,0	1/1:0,11:11:33.11:558,33,0
chr10	44827512	.	A	ATATC	1554	PASS	AB=0.958;AC=17;AF=0.304;AN=56;BaseQRankSum=1.406;DP=540;FS=6.622;HRun=0;HaplotypeScore=117.9025;InbreedingCoeff=0.6862;MQ=63.61;MQ0=35;MQRankSum=-1.179;QD=8.88;ReadPosRankSum=-0.883;VQSLOD=1.9941;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:15:0.38:0,0,176	0/0:15,0:17:38.84:0,39,339	0/0:29,0:13:32.26:0,32,278	0/0:43,0:21:28.52:0,29,264	0/0:23,0:20:38:0,38,368	0/0:25,0:25:15.27:0,15,488	0/0:15,0:17:47.87:0,48,481	0/0:29,0:27:19.96:0,20,494	0/0:14,0:15:41.94:0,42,412	0/0:21,0:21:47.83:0,48,453	0/0:15,0:15:29.92:0,30,276	1/1:10,0:10:20.99:189,21,0	1/1:13,0:13:38.95:383,39,0	1/1:8,0:8:11.99:100,12,0	0/0:14,0:19:43.24:0,43,413	0/0:11,0:10:24.05:0,24,388	1/1:3,0:22:11.83:201,12,0	0/0:8,0:9:23.76:0,24,173	0/1:26,0:21:73.89:74,0,199	0/0:24,0:25:50.21:0,50,389	0/0:15,0:14:20.97:0,21,172	1/1:16,0:17:32.97:324,33,0	1/1:14,0:14:23.84:227,24,0	1/1:5,20:24:2.86:83,3,0	0/0:17,0:15:29.96:0,30,248	0/0:18,0:18:34.84:0,35,283	0/1:18,0:21:99:161,0,204	0/1:14,0:11:3.07:3,0,118
chr10	44827513	.	T	TCA	2162.30	PASS	AB=1.000;AC=18;AF=0.321;AN=56;BaseQRankSum=8.486;DP=547;FS=0.417;HRun=0;HaplotypeScore=102.5145;InbreedingCoeff=0.7968;MQ=62.70;MQ0=35;MQRankSum=-1.845;QD=11.03;ReadPosRankSum=0.828;VQSLOD=3.1650;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:16,1:16:35.15:313,35,0	0/0:18,0:18:35.92:0,36,311	0/0:28,0:12:29.85:0,30,271	0/0:43,0:21:20:0,20,257	1/1:24,0:21:26.49:345,26,0	0/0:26,0:26:15.50:0,16,464	0/0:18,0:18:48:0,48,464	0/0:31,0:29:51.50:0,51,558	0/0:14,0:14:37.76:0,38,336	0/0:22,0:22:53.74:0,54,485	0/0:16,0:16:14.03:0,14,235	0/1:10,0:10:3.20:3,0,125	0/0:15,0:14:3.54:0,4,207	0/0:7,0:7:11.99:0,12,100	0/0:19,0:19:28.78:0,29,374	0/0:11,0:10:24.02:0,24,273	0/1:22,0:21:7.90:11,0,8	0/0:9,0:9:8.86:0,9,159	1/1:26,0:21:18.87:263,19,0	1/1:27,0:27:43.07:356,43,0	1/1:14,0:13:16.10:159,16,0	0/0:18,0:17:11.53:0,12,200	0/0:13,0:13:17.04:0,17,160	0/0:27,0:24:0.63:0,1,3	0/0:16,0:14:23.99:0,24,206	1/1:2,16:17:41.79:372,42,0	1/1:20,2:22:44.61:414,45,0	1/1:16,0:12:18.13:128,18,0
chr10	44827771	.	AAC	A	6602.38	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=4.277;DP=563;FS=7.726;HRun=0;HaplotypeScore=75.2496;InbreedingCoeff=0.9985;MQ=67.24;MQ0=2;MQRankSum=-0.854;QD=40.01;ReadPosRankSum=1.606;VQSLOD=6.4790;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,14:14:42.14:618,42,0	0/0:11,0:11:33.11:0,33,605	0/0:23,0:18:50.95:0,51,839	0/0:15,0:13:36.06:0,36,577	1/1:1,21:22:63.17:904,63,0	0/0:26,0:26:78.27:0,78,1461	0/0:21,0:21:60.19:0,60,1080	0/0:27,0:27:72.25:0,72,1335	0/0:27,0:27:81.21:0,81,1472	0/0:27,0:27:72.15:0,72,1310	0/0:21,0:21:63.22:0,63,1174	0/0:20,0:20:54.17:0,54,965	0/0:21,0:21:57.17:0,57,1031	0/0:19,0:19:57.20:0,57,1067	0/0:22,0:22:66.23:0,66,1212	0/0:12,0:12:36.12:0,36,666	0/0:19,0:19:51.15:0,51,920	0/0:12,0:12:36.12:0,36,673	1/1:2,23:24:69.23:1005,69,0	1/1:0,17:17:51.17:751,51,0	1/1:2,28:30:75.25:1104,75,0	0/0:26,0:26:78.25:0,78,1428	0/0:11,0:11:33.11:0,33,604	0/0:14,0:14:42.14:0,42,775	0/0:24,0:24:72.23:0,72,1297	1/1:0,25:24:69.22:999,69,0	1/1:1,24:25:66.19:956,66,0	1/1:0,7:7:18.06:265,18,0
chr10	44828233	.	TA	T	3975.80	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=1.046;DP=549;FS=15.783;HRun=8;HaplotypeScore=73.4934;InbreedingCoeff=0.9981;MQ=77.23;MQ0=0;MQRankSum=-1.918;QD=21.85;ReadPosRankSum=1.342;VQSLOD=2.5601;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,14:17:26.83:260,27,0	0/0:12,0:12:36.11:0,36,435	0/0:19,0:20:34.02:0,34,445	0/0:26,0:25:51.87:0,52,575	1/1:8,28:36:78.10:753,78,0	0/0:22,0:22:51.14:0,51,605	0/0:18,0:18:42.13:0,42,507	0/0:3,0:26:63.79:0,64,360	0/0:17,0:17:45.07:0,45,525	0/0:1,0:22:60.38:0,60,307	0/0:1,0:24:63.49:0,63,334	0/0:23,0:23:63.19:0,63,759	0/0:15,0:15:45.10:0,45,526	0/0:14,0:14:42.12:0,42,493	0/0:2,0:19:40.39:0,40,226	0/0:1,0:17:48.97:0,49,260	0/0:16,0:15:42.09:0,42,491	0/0:5,0:14:20.76:0,21,174	1/1:2,23:25:69.09:659,69,0	1/1:3,28:31:78.06:742,78,0	1/1:0,9:9:21.03:203,21,0	0/0:11,0:11:33.10:0,33,399	0/0:23,0:23:60.18:0,60,715	0/0:15,0:15:39.12:0,39,471	0/0:3,0:13:31.75:0,32,171	1/1:4,25:30:60.29:663,60,0	1/1:3,21:24:42.06:406,42,0	1/1:0,10:10:30.05:290,30,0
chr10	44828567	.	G	GA	5424.16	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-12.191;DP=526;FS=0.359;HRun=6;HaplotypeScore=61.1807;InbreedingCoeff=0.9549;MQ=69.99;MQ0=0;MQRankSum=-1.622;QD=28.85;ReadPosRankSum=-0.595;VQSLOD=5.1343;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,23:29:35.48:676,35,0	0/0:9,0:9:21.04:0,21,214	0/0:15,0:15:35.92:0,36,340	0/0:18,0:18:45.01:0,45,437	1/1:5,25:30:75.24:943,75,0	0/0:28,0:28:78.16:0,78,788	0/0:19,0:19:48.10:0,48,490	1/1:3,18:21:54.15:653,54,0	0/0:19,0:19:57.13:0,57,581	0/0:20,0:20:51.09:0,51,510	0/0:28,0:28:72.16:0,72,735	0/0:20,0:20:60.14:0,60,612	0/0:18,0:18:54.12:0,54,551	0/0:17,0:17:48.11:0,48,489	0/0:19,0:19:54.12:0,54,551	0/0:18,0:18:51.12:0,51,520	0/0:11,0:11:28.88:0,29,280	0/0:13,0:13:39.09:0,39,397	1/1:3,13:16:8.51:421,9,0	1/1:5,23:28:66.21:830,66,0	1/1:1,9:10:24.08:302,24,0	0/0:12,0:12:33.07:0,33,337	0/0:23,0:23:60.13:0,60,612	0/0:14,0:14:39.09:0,39,398	0/0:17,0:17:48.11:0,48,489	1/1:2,19:21:1.97:656,2,0	1/1:4,20:24:57.18:717,57,0	1/1:4,5:9:18.06:225,18,0
chr10	44829255	.	AATT	A	6185.84	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=14.513;DP=492;FS=2.275;HRun=0;HaplotypeScore=93.3341;InbreedingCoeff=0.9597;MQ=74.66;MQ0=0;MQRankSum=-5.052;QD=44.82;ReadPosRankSum=1.977;VQSLOD=6.4741;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,15:15:42.14:675,42,0	0/0:3,0:3:9.03:0,9,211	0/0:17,0:17:20.80:0,21,1057	0/0:8,0:8:9.60:0,10,380	1/1:0,30:30:78.26:1286,78,0	0/0:23,0:23:69.24:0,69,1677	0/0:15,0:15:45.15:0,45,1049	0/0:30,0:30:87.27:0,87,1980	0/0:21,0:21:63.22:0,63,1508	0/0:30,0:29:87.30:0,87,2023	0/0:27,0:27:81.28:0,81,1947	0/0:13,0:13:39.13:0,39,914	0/0:23,0:23:69.22:0,69,1554	0/0:25,0:25:75.23:0,75,1747	0/0:23,0:23:69.24:0,69,1678	0/0:13,0:13:36.12:0,36,841	0/0:19,0:19:51.17:0,51,1160	0/0:6,0:6:15.05:0,15,364	1/1:0,11:10:21.07:363,21,0	1/1:0,19:19:57.19:950,57,0	1/1:0,10:10:24.08:396,24,0	0/0:15,0:15:45.15:0,45,1066	0/0:12,0:12:36.11:0,36,808	0/0:15,0:15:45.15:0,45,1094	0/0:16,0:16:48.10:0,48,985	1/1:0,23:23:69.21:1145,69,0	1/1:0,28:28:75.26:1271,75,0	1/1:0,2:2:6.02:100,6,0
chr10	44829566	.	CATATATATATATATATATGTAT	C	1840.86	PASS	AB=1.000;AC=13;AF=0.325;AN=40;BaseQRankSum=3.248;DP=244;FS=0.000;HRun=0;HaplotypeScore=113.1711;InbreedingCoeff=0.4065;MQ=76.15;MQ0=5;MQRankSum=-6.074;QD=21.91;ReadPosRankSum=2.143;VQSLOD=1.9670;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	1/1:3,0:4:3.01:103,3,0	0/0:18,0:9:5.85:0,6,70	0/0:24,0:10:12.51:0,13,222	./.	0/0:10,0:10:21.54:0,22,1529	0/0:9,0:9:18.05:0,18,915	0/1:22,0:22:72.97:73,0,262	0/0:2,0:2:3.01:0,3,250	1/1:5,7:12:18.06:1046,18,0	./.	./.	0/0:5,0:5:3.01:0,3,220	./.	1/1:15,0:15:3.01:167,3,0	./.	0/0:5,0:5:3.01:0,3,195	1/1:4,0:4:9.01:237,9,0	0/0:9,0:9:4.58:0,5,252	0/0:6,0:6:3.01:0,3,75	0/0:5,0:5:6:0,6,74	./.	0/0:3,0:3:3.01:0,3,50	./.	1/1:14,0:14:3.01:167,3,0	0/0:5,0:5:6.01:0,6,75	0/0:8,0:8:1.83:0,2,138	1/1:13,0:12:2.53:178,3,0
chr10	44829567	.	ATATATATATATATATATG	A	2239.45	PASS	AB=1.000;AC=18;AF=0.500;AN=36;BaseQRankSum=3.329;DP=246;FS=1.050;HRun=0;HaplotypeScore=95.7487;InbreedingCoeff=0.3986;MQ=74.07;MQ0=7;MQRankSum=-4.506;QD=20.93;ReadPosRankSum=2.167;VQSLOD=1.9583;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	1/1:4,0:4:3.01:102,3,0	0/0:18,0:9:2.29:0,2,6	0/0:23,0:9:11.95:0,12,134	./.	0/0:12,0:11:18.53:0,19,1180	0/0:9,0:9:15.03:0,15,614	1/1:9,11:20:32.79:404,33,0	0/0:2,0:2:3.01:0,3,200	1/1:12,0:12:18.06:812,18,0	./.	./.	0/0:5,0:5:3.01:0,3,151	./.	1/1:16,0:16:3.01:126,3,0	./.	0/0:5,0:5:3.01:0,3,146	1/1:4,0:4:3.48:140,3,0	0/1:9,0:9:34.54:35,0,107	0/0:6,0:6:3:0,3,25	./.	./.	./.	./.	1/1:15,0:15:3.01:126,3,0	1/1:6,0:6:2.99:23,3,0	0/1:8,0:8:18.96:42,0,19	1/1:13,0:12:27.09:565,27,0
chr10	44829571	.	ATATATATATATATG	A	2126.20	PASS	AB=1.000;AC=22;AF=0.611;AN=36;BaseQRankSum=3.508;DP=235;FS=2.541;HRun=0;HaplotypeScore=76.1726;InbreedingCoeff=0.4025;MQ=72.69;MQ0=11;MQRankSum=-4.329;QD=15.30;ReadPosRankSum=1.730;VQSLOD=1.3617;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	1/1:2,0:2:3.01:105,3,0	1/1:17,0:8:0.47:1,0,0	0/0:23,0:9:2.04:0,2,65	./.	0/0:13,0:12:21.07:0,21,1208	0/0:9,0:9:12.04:0,12,575	0/1:18,0:17:94.66:128,0,95	0/0:1,0:1:3.01:0,3,195	1/1:11,0:11:18.06:599,18,0	0/1:19,0:19:0:0,0,0	./.	0/0:5,0:5:3.01:0,3,101	./.	1/1:18,0:18:3.01:98,3,0	./.	0/0:5,0:5:3.01:0,3,98	1/1:4,0:4:3.01:110,3,0	1/1:9,0:8:7.34:110,7,0	./.	./.	./.	./.	./.	1/1:15,0:15:3.01:98,3,0	1/1:3,2:5:3.01:68,3,0	1/1:7,0:7:3.01:88,3,0	1/1:13,1:12:27.09:846,27,0
chr10	44829573	.	ATATATATATATG	A	2130.15	PASS	AB=1.000;AC=23;AF=0.639;AN=36;BaseQRankSum=3.022;DP=220;FS=2.414;HRun=0;HaplotypeScore=67.3407;InbreedingCoeff=0.3827;MQ=71.61;MQ0=11;MQRankSum=-4.569;QD=13.74;ReadPosRankSum=1.474;VQSLOD=1.4541;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	1/1:2,0:2:3.01:87,3,0	1/1:17,0:8:1.82:5,2,0	0/1:22,0:8:1.70:2,0,63	./.	0/0:13,0:12:20.60:0,21,1038	0/0:9,0:9:12.03:0,12,485	0/1:17,0:16:86.61:87,0,110	0/0:1,0:1:3.01:0,3,170	1/1:11,0:11:18.06:506,18,0	0/1:16,0:16:0:0,0,0	./.	0/0:3,0:3:3.01:0,3,76	./.	1/1:19,0:19:3.01:84,3,0	./.	0/0:3,0:3:3.01:0,3,74	1/1:4,0:4:3.01:96,3,0	1/1:3,4:6:12:200,12,0	./.	./.	./.	./.	./.	1/1:15,0:15:3.01:84,3,0	1/1:4,0:4:3.01:45,3,0	1/1:3,4:7:3.01:107,3,0	1/1:5,9:12:27.09:953,27,0
chr10	44829577	.	ATATATATGTATATATATATATATG	A	1832.88	PASS	AB=0.839;AC=13;AF=0.310;AN=42;BaseQRankSum=3.231;DP=209;FS=0.000;HRun=0;HaplotypeScore=91.3408;InbreedingCoeff=0.3374;MQ=66.88;MQ0=12;MQRankSum=-5.673;QD=18.90;ReadPosRankSum=3.265;VQSLOD=1.0382;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	1/1:2,0:2:3.01:65,3,0	0/0:14,0:5:5.98:0,6,70	0/0:22,0:8:10.09:0,10,226	./.	0/0:11,0:10:24.08:0,24,1723	0/0:8,0:8:18.93:0,19,934	0/1:16,0:15:72.97:73,0,262	0/0:1,0:1:3.01:0,3,250	1/1:11,0:11:18.06:1046,18,0	0/1:1,15:16:0:0,0,0	./.	0/0:2,0:2:3.01:0,3,222	./.	1/1:3,15:19:3.01:199,3,0	./.	0/0:5,0:4:6.02:0,6,322	1/1:4,0:4:9.01:237,9,0	0/0:4,0:4:4.58:0,5,252	0/0:3,0:3:3.01:0,3,75	0/0:4,0:4:6:0,6,74	./.	0/0:2,0:2:3.01:0,3,50	./.	1/1:2,13:15:3.01:199,3,0	0/0:4,0:4:6.48:0,6,76	0/0:7,0:7:1.83:0,2,138	0/1:14,0:12:42.27:144,0,42
chr10	44829937	.	AT	A	4457.88	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=7.704;DP=473;FS=9.204;HRun=1;HaplotypeScore=73.5508;InbreedingCoeff=0.9788;MQ=73.90;MQ0=1;MQRankSum=-3.091;QD=38.10;ReadPosRankSum=1.614;VQSLOD=5.0991;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,9:9:27.09:377,27,0	0/0:6,0:6:12.04:0,12,191	0/0:22,0:22:63.21:0,63,1004	0/0:9,0:9:27.09:0,27,427	1/1:0,19:19:48.16:671,48,0	0/0:24,0:24:63.20:0,63,983	0/0:23,0:23:63.21:0,63,993	0/0:26,0:26:78.27:0,78,1236	0/0:22,0:22:63.21:0,63,1004	0/0:25,0:25:75.25:0,75,1178	0/0:22,0:22:57.19:0,57,909	0/0:19,0:19:54.18:0,54,861	0/0:21,0:21:63.21:0,63,1005	0/0:18,0:18:51.17:0,51,814	0/0:15,0:14:39.13:0,39,622	0/0:18,0:18:48.16:0,48,767	0/0:18,0:18:47.92:0,48,764	0/0:8,0:8:21.07:0,21,335	1/1:0,11:11:33.02:417,33,0	1/1:0,19:19:51.17:713,51,0	1/1:0,12:12:36.12:503,36,0	0/0:15,0:15:42.13:0,42,647	0/0:20,0:20:51.17:0,51,803	0/0:9,0:9:24.08:0,24,383	0/0:16,0:16:48.16:0,48,765	1/1:2,18:19:9.19:688,9,0	1/1:0,23:23:66.22:922,66,0	1/1:0,4:4:12.04:168,12,0
chr10	44830007	.	T	TAAAGATCCAG	1494.85	PASS	AC=26;AF=1.000;AN=26;DP=25;FS=0.000;HRun=0;HaplotypeScore=16.5065;InbreedingCoeff=-0.1470;MQ=87.19;MQ0=0;QD=62.29;VQSLOD=2.2977;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	1/1:3,1:4:9.03:260,9,0	./.	1/1:2,0:2:6:139,6,0	1/1:1,0:1:3.01:93,3,0	./.	1/1:1,0:1:3.01:57,3,0	./.	1/1:0,0:1:3.01:112,3,0	1/1:1,0:1:3.01:93,3,0	./.	1/1:2,0:2:6.02:170,6,0	1/1:2,0:3:6.02:109,6,0	1/1:1,0:1:3:25,3,0	1/1:2,0:2:6.01:79,6,0	./.	./.	1/1:1,0:1:3.01:62,3,0	./.	./.	1/1:1,0:1:3.01:103,3,0	1/1:1,0:3:9.03:265,9,0	./.	./.	./.	./.	./.
chr10	44830977	.	AT	A	7631.59	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=18.607;DP=674;FS=3.524;HRun=2;HaplotypeScore=90.0049;InbreedingCoeff=0.9900;MQ=75.53;MQ0=0;MQRankSum=-1.976;QD=35.33;ReadPosRankSum=2.411;VQSLOD=5.3856;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,16:17:39.13:500,39,0	0/0:15,0:15:45.15:0,45,674	0/0:20,0:20:8.91:0,9,596	0/0:19,0:19:41.02:0,41,619	1/1:0,24:24:69.22:889,69,0	0/0:25,0:25:75.22:0,75,1078	0/0:19,0:19:57.18:0,57,834	0/0:29,0:29:87.27:0,87,1253	0/0:24,0:24:72.24:0,72,1061	0/0:26,0:27:81.27:0,81,1199	0/0:25,0:25:75.24:0,75,1103	0/0:20,0:20:60.19:0,60,879	0/0:23,0:23:69.23:0,69,1034	0/0:26,0:26:78.26:0,78,1167	0/0:23,0:23:66.22:0,66,989	0/0:17,0:17:51.17:0,51,761	0/0:23,0:23:69.22:0,69,1009	0/0:28,0:28:62.62:0,63,1137	1/1:0,24:24:69.21:877,69,0	1/1:0,34:34:93.27:1183,93,0	1/1:0,34:34:93.30:1208,93,0	0/0:27,0:27:78.25:0,78,1147	0/0:26,0:26:75.05:0,75,1121	0/0:18,0:18:51.17:0,51,764	0/0:24,0:24:72.24:0,72,1078	1/1:0,38:38:99:1456,114,0	1/1:0,26:26:69.22:896,69,0	1/1:0,19:19:48.16:623,48,0
chr10	44832188	.	AT	A	3590.33	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=15.762;DP=569;FS=14.897;HRun=7;HaplotypeScore=92.7297;InbreedingCoeff=0.9990;MQ=76.88;MQ0=0;MQRankSum=-6.711;QD=23.62;ReadPosRankSum=2.456;VQSLOD=2.5204;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,29:31:78.11:782,78,0	0/0:14,0:14:39.09:0,39,463	0/0:15,0:15:33.03:0,33,366	0/0:20,0:20:45.06:0,45,537	1/1:3,22:25:51:496,51,0	0/0:23,0:23:66.21:0,66,830	0/0:20,0:20:54.17:0,54,679	0/0:36,0:36:99:0,99,1212	0/0:26,0:26:75.23:0,75,930	0/0:27,0:27:69.22:0,69,880	0/0:21,0:21:60.19:0,60,755	0/0:21,0:21:54.17:0,54,678	0/0:25,0:25:75.24:0,75,943	0/0:22,0:22:60.18:0,60,742	0/0:23,0:23:60.18:0,60,742	0/0:21,0:21:54.16:0,54,666	0/0:19,0:19:42.13:0,42,528	0/0:14,0:14:39.12:0,39,490	1/1:5,13:18:39.08:398,39,0	1/1:0,11:11:33.08:336,33,0	1/1:1,7:8:21.05:214,21,0	0/0:11,0:11:27.09:0,27,340	0/0:26,0:26:75.24:0,75,943	0/0:14,0:14:39.12:0,39,491	0/0:19,0:19:42.09:0,42,511	1/1:2,16:18:45.10:459,45,0	1/1:1,26:25:51.05:507,51,0	1/1:1,13:14:39.09:398,39,0
chr10	44832266	.	A	AGACAG	16472.36	PASS	AB=0.545;AC=27;AF=0.482;AN=56;BaseQRankSum=-5.254;DP=554;FS=22.633;HRun=0;HaplotypeScore=108.9078;InbreedingCoeff=0.8860;MQ=84.52;MQ0=0;MQRankSum=-9.939;QD=66.96;ReadPosRankSum=3.951;VQSLOD=4.2027;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,5:10:15.05:468,15,0	0/0:16,0:16:48.08:0,48,895	0/0:19,0:19:54.17:0,54,1065	0/0:32,0:33:79.64:0,80,1604	1/1:5,15:20:39.13:1106,39,0	0/0:15,0:15:36.12:0,36,759	0/0:18,0:18:48.16:0,48,1013	0/0:30,0:30:72.25:0,72,1492	0/0:28,0:28:78.27:0,78,1658	1/1:3,28:27:78.27:2371,78,0	1/1:2,12:16:36.12:1125,36,0	0/0:23,0:23:51.16:0,51,1047	0/0:21,0:21:57.18:0,57,1152	0/0:21,0:21:51.13:0,51,1040	1/1:4,23:27:66.23:1987,66,0	0/1:3,15:17:18.80:1188,0,19	0/0:28,0:28:75.22:0,75,1506	1/1:6,20:27:57.20:1708,57,0	1/1:3,4:8:21.07:551,21,0	1/1:7,22:28:63.22:1963,63,0	1/1:1,1:2:3.01:94,3,0	0/0:18,0:18:54.19:0,54,1151	0/0:17,0:17:39.12:0,39,768	0/0:21,0:21:54.11:0,54,1029	1/1:1,34:36:93.32:2910,93,0	1/1:3,5:8:21.04:515,21,0	1/1:5,2:8:8.99:207,9,0	1/1:0,3:3:9.03:281,9,0
chr10	44832347	.	CT	C	945.67	PASS	AC=14;AF=0.259;AN=54;BaseQRankSum=8.784;DP=527;FS=13.128;HRun=2;HaplotypeScore=70.0345;InbreedingCoeff=0.9392;MQ=78.34;MQ0=0;MQRankSum=-8.478;QD=16.30;ReadPosRankSum=1.777;VQSLOD=2.4380;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,5:5:9.03:117,9,0	0/0:15,0:15:45.15:0,45,668	0/0:24,0:24:72.22:0,72,1056	0/0:33,0:33:95.67:0,96,1346	1/1:1,12:11:12.04:155,12,0	0/0:20,0:20:60.20:0,60,898	0/0:27,0:27:81.23:0,81,1189	0/0:22,0:22:63.20:0,63,921	0/0:29,0:29:87.25:0,87,1226	0/0:19,0:19:57.18:0,57,826	0/0:12,0:12:36.12:0,36,539	0/0:19,0:19:57.18:0,57,818	0/0:31,0:31:87.29:0,87,1297	0/0:25,0:25:69.23:0,69,1032	0/0:15,0:14:39.13:0,39,573	0/0:23,0:22:60.20:0,60,899	0/0:29,0:28:75.15:0,75,1034	0/0:25,0:25:66.18:0,66,964	1/1:0,5:4:6.02:78,6,0	1/1:1,11:11:18.06:233,18,0	1/1:0,4:4:9.03:117,9,0	0/0:21,0:21:63.21:0,63,939	0/0:16,0:16:48.15:0,48,699	0/0:36,0:36:93.30:0,93,1375	0/0:27,0:27:78.21:0,78,1118	1/1:1,6:5:9.03:117,9,0	1/1:1,11:11:24.08:311,24,0	./.
chr10	44832438	.	GCA	G	589.08	PASS	AC=4;AF=0.083;AN=48;BaseQRankSum=3.175;DP=528;FS=3.584;HRun=0;HaplotypeScore=72.1765;InbreedingCoeff=0.8202;MQ=46.02;MQ0=89;MQRankSum=-4.120;QD=19.64;ReadPosRankSum=-1.874;VQSLOD=3.2353;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	1/1:1,6:6:18.06:264,18,0	./.	./.	0/0:11,0:10:12.04:0,12,182	0/0:19,0:19:42.14:0,42,778	0/0:45,0:41:72.04:0,72,1341	1/1:3,20:10:30.10:442,30,0	0/0:20,0:20:51.17:0,51,945	0/0:17,0:16:45.15:0,45,843	0/0:9,0:9:18.06:0,18,312	0/0:35,0:35:75.26:0,75,1383	0/0:24,0:23:54.17:0,54,956	0/0:28,0:28:51.01:0,51,941	0/0:30,0:29:63.21:0,63,1172	0/0:16,0:15:33.10:0,33,579	0/0:30,0:29:66.23:0,66,1223	0/0:9,0:8:21.07:0,21,394	0/0:8,0:2:2.99:0,3,23	0/0:9,0:7:9.03:0,9,159	./.	0/0:14,0:14:27.09:0,27,498	0/0:14,0:13:33.11:0,33,608	0/0:42,0:42:81.28:0,81,1517	0/0:19,0:19:36.12:0,36,657	0/0:15,0:12:36.12:0,36,594	0/0:11,0:9:9.03:0,9,158	0/0:5,0:5:9.03:0,9,144
chr10	44832720	.	A	AC	6087.19	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=6.423;DP=656;FS=2.463;HRun=4;HaplotypeScore=106.0057;InbreedingCoeff=0.9985;MQ=81.64;MQ0=0;MQRankSum=-4.281;QD=32.90;ReadPosRankSum=2.018;VQSLOD=4.7992;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,41:45:96.51:1424,97,0	0/0:9,0:9:21.06:0,21,237	0/0:31,0:31:71.12:0,71,734	0/0:20,0:19:42.11:0,42,461	1/1:2,21:23:51.17:696,51,0	0/0:24,0:24:72.21:0,72,816	0/0:31,0:31:81.23:0,81,918	0/0:26,0:26:69.19:0,69,775	0/0:28,0:28:72.18:0,72,804	0/0:17,0:16:48.14:0,48,544	0/0:18,0:18:39.11:0,39,442	0/0:30,0:30:81.23:0,81,918	0/0:28,0:28:78.20:0,78,874	0/0:28,0:28:75.21:0,75,851	0/0:16,0:16:36.10:0,36,408	0/0:14,0:14:39.11:0,39,442	0/0:33,0:33:96.26:0,96,1078	0/0:22,0:22:57.16:0,57,646	1/1:1,21:22:63.21:861,63,0	1/1:1,16:17:33.11:451,33,0	1/1:1,30:30:78.26:1066,78,0	0/0:31,0:31:90.26:0,90,1020	0/0:18,0:18:54.15:0,54,611	0/0:20,0:20:57.16:0,57,647	0/0:27,0:27:69.19:0,69,782	1/1:1,20:21:60.20:819,60,0	1/1:0,14:14:36.12:483,36,0	1/1:3,9:11:21.07:287,21,0
chr10	44832745	.	CGTT	C	3998.55	PASS	AB=0.533;AC=11;AF=0.196;AN=56;BaseQRankSum=7.625;DP=725;FS=0.882;HRun=0;HaplotypeScore=144.6740;InbreedingCoeff=0.8858;MQ=93.64;MQ0=0;MQRankSum=-3.152;QD=35.70;ReadPosRankSum=2.939;VQSLOD=4.5033;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,126,2690	0/0:8,0:8:20.86:0,21,422	0/0:40,0:43:92.15:0,92,1993	0/0:29,0:28:64.95:0,65,1267	0/0:32,0:32:81.21:0,81,1606	0/0:21,0:21:57.20:0,57,1235	0/0:28,0:28:84.27:0,84,1812	0/0:33,0:33:87.28:0,87,1795	0/0:29,0:29:78.25:0,78,1621	1/1:1,15:15:39.13:622,39,0	1/1:0,14:14:33.11:529,33,0	0/0:32,0:32:90.30:0,90,1912	0/0:28,0:28:81.26:0,81,1742	0/0:31,0:31:90.27:0,90,1885	1/1:0,17:17:33.11:529,33,0	0/1:2,14:16:29.80:494,0,30	0/0:39,0:39:99:0,111,2301	1/1:5,17:22:45.15:720,45,0	0/0:38,0:38:99:0,108,2281	0/0:21,0:20:48.16:0,48,1057	0/0:26,0:26:69.24:0,69,1522	0/0:31,0:31:90.31:0,90,1958	0/0:17,0:17:45.12:0,45,945	0/0:24,0:24:72.24:0,72,1547	1/1:1,26:27:69.24:1105,69,0	0/0:28,0:28:66.20:0,66,1326	0/0:14,0:14:30.07:0,30,579	0/0:12,0:12:30.09:0,30,580
chr10	44833216	.	G	GT	6868.58	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=17.190;DP=686;FS=13.052;HRun=0;HaplotypeScore=120.8983;InbreedingCoeff=0.9992;MQ=86.73;MQ0=0;MQRankSum=-4.079;QD=33.34;ReadPosRankSum=2.110;VQSLOD=3.3324;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,26:26:57.19:832,57,0	0/0:13,0:13:39.12:0,39,527	0/0:33,0:33:85.58:0,86,1159	0/0:16,0:16:45.12:0,45,588	1/1:2,35:37:78.01:1030,78,0	0/0:28,0:27:81.26:0,81,1112	0/0:20,0:20:60.16:0,60,788	0/0:35,0:35:99:0,105,1414	0/0:23,0:23:69.22:0,69,948	0/0:31,0:31:93.23:0,93,1186	0/0:24,0:24:65.17:0,65,858	0/0:27,0:27:81.24:0,81,1083	0/0:30,0:30:87.27:0,87,1176	0/0:23,0:23:69.21:0,69,932	0/0:27,0:26:81.23:0,81,1095	0/0:23,0:23:66.16:0,66,865	0/0:18,0:18:54.18:0,54,755	0/0:11,0:11:33.05:0,33,420	1/1:0,16:16:45.06:546,45,0	1/1:1,23:24:59.93:754,60,0	1/1:0,31:31:63.21:915,63,0	0/0:19,0:19:57.09:0,57,752	0/0:25,0:25:75.18:0,75,989	0/0:29,0:29:87.25:0,87,1194	0/0:25,0:25:65.98:0,66,790	1/1:2,21:23:21.18:792,21,0	1/1:2,36:38:99:1517,105,0	1/1:0,11:11:33.11:483,33,0
chr10	44833282	.	A	ACTT	13614.54	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=13.645;DP=557;FS=3.848;HRun=0;HaplotypeScore=165.7746;InbreedingCoeff=0.9984;MQ=75.09;MQ0=0;MQRankSum=-16.737;QD=43.36;ReadPosRankSum=-0.809;VQSLOD=5.7657;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:16:30.10:531,30,0	1/1:3,9:12:36.04:701,36,0	0/0:15,0:15:39.13:0,39,631	0/0:17,0:17:37.87:0,38,543	1/1:27,0:27:45.15:804,45,0	0/0:28,0:28:84.27:0,84,1373	0/0:25,0:25:72.23:0,72,1175	1/1:10,22:32:78.27:1725,78,0	0/0:13,0:13:39.13:0,39,648	1/1:28,0:28:84.29:1401,84,0	1/1:30,0:30:78.23:1311,78,0	0/0:17,0:17:45.15:0,45,746	0/0:21,0:21:60.19:0,60,973	0/0:17,0:17:51.17:0,51,848	1/1:12,0:12:36.12:638,36,0	1/1:14,0:14:42.14:732,42,0	0/0:15,0:15:42.13:0,42,671	1/1:12,0:12:27.05:414,27,0	1/1:16,0:16:42.13:673,42,0	1/1:25,0:25:57.18:980,57,0	1/1:9,0:9:18.06:318,18,0	0/0:28,0:28:84.28:0,84,1365	0/0:27,0:27:78.25:0,78,1275	0/0:20,0:20:54.18:0,54,900	1/1:25,0:25:69.24:1206,69,0	1/1:22,0:22:51.17:874,51,0	1/1:22,0:22:48.16:842,48,0	1/1:12,0:12:27.09:465,27,0
chr10	44833284	.	T	TTCA	16885.77	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=15.628;DP=556;FS=4.365;HRun=0;HaplotypeScore=155.1600;InbreedingCoeff=0.9984;MQ=72.82;MQ0=0;MQRankSum=-16.771;QD=53.61;ReadPosRankSum=-0.248;VQSLOD=5.9289;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,14:15:30.10:706,30,0	1/1:12,0:12:31.45:410,31,0	0/0:14,0:14:42.11:0,42,670	0/0:15,0:15:37.93:0,38,596	1/1:3,24:27:45.15:1058,45,0	0/0:30,0:30:90.29:0,90,1528	0/0:25,0:25:75.23:0,75,1266	1/1:29,0:29:27.36:1056,27,0	0/0:14,0:14:42.14:0,42,715	1/1:2,26:29:87.30:2043,87,0	1/1:7,24:31:78.27:1784,78,0	0/0:16,0:16:45.15:0,45,788	0/0:21,0:21:60.19:0,60,1027	0/0:17,0:17:51.17:0,51,896	1/1:2,11:13:36.12:847,36,0	1/1:2,14:16:45.15:1048,45,0	0/0:14,0:14:42.13:0,42,713	1/1:4,8:12:30.06:652,30,0	1/1:3,12:15:42.14:964,42,0	1/1:3,22:25:57.18:1296,57,0	1/1:0,8:8:18.06:424,18,0	0/0:29,0:29:84.28:0,84,1449	0/0:28,0:28:78.27:0,78,1371	0/0:18,0:18:54.19:0,54,953	1/1:4,24:28:69.24:1625,69,0	1/1:1,21:22:51.18:1203,51,0	1/1:3,18:21:48.16:1131,48,0	1/1:2,10:12:27.09:637,27,0
chr10	44833292	.	A	AT	4165.64	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=8.191;DP=539;FS=0.000;HRun=6;HaplotypeScore=168.7611;InbreedingCoeff=0.9732;MQ=75.63;MQ0=0;MQRankSum=-10.525;QD=31.80;ReadPosRankSum=-0.075;VQSLOD=1.0558;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:24.14:0,24,106	0/0:13,0:13:39.09:0,39,398	0/0:14,0:14:33.03:0,33,324	0/0:17,0:17:41.43:0,41,400	0/0:23,0:23:21.32:0,21,101	0/0:30,0:30:90.17:0,90,903	0/0:24,0:24:66.13:0,66,666	0/0:25,0:25:57.12:0,57,580	0/0:14,0:14:36.08:0,36,367	1/1:3,26:29:78.25:981,78,0	1/1:2,26:28:72.23:897,72,0	0/0:18,0:18:48.09:0,48,483	0/0:21,0:21:57.12:0,57,581	0/0:17,0:17:48.11:0,48,490	1/1:2,14:16:42.13:528,42,0	1/1:2,16:18:48.14:591,48,0	0/0:14,0:14:39.06:0,39,390	1/1:3,9:12:36.12:452,36,0	0/0:12,0:12:27.60:0,28,180	0/0:20,0:20:38.94:0,39,149	0/0:7,0:7:5.04:0,5,19	0/0:33,0:33:93.21:0,93,948	0/0:26,0:26:72.16:0,72,735	0/0:20,0:20:54.11:0,54,545	1/1:7,21:28:57.18:716,57,0	0/0:20,0:20:40.50:0,41,209	0/0:18,0:18:26.11:0,26,108	0/0:10,0:10:24.11:0,24,109
chr10	44833298	.	TCCAGCAATGGTTCTA	T	8665.27	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=12.758;DP=536;FS=14.882;HRun=0;HaplotypeScore=298.1082;InbreedingCoeff=0.9791;MQ=80.70;MQ0=0;MQRankSum=-11.498;QD=75.35;ReadPosRankSum=4.359;VQSLOD=3.0016;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,8:12:21.07:934,21,0	0/0:13,0:13:39.13:0,39,2870	0/0:16,0:16:39.13:0,39,2124	0/0:20,0:21:51.08:0,51,2861	1/1:8,15:23:27.09:1052,27,0	0/0:31,0:31:84.29:0,84,5696	0/0:22,0:22:63.20:0,63,3967	0/0:23,0:23:63.17:0,63,3349	0/0:14,0:14:42.14:0,42,3088	0/0:29,0:29:87.22:0,87,4854	0/0:28,0:28:78.27:0,78,4924	0/0:18,0:18:54.19:0,54,3753	0/0:22,0:22:63.22:0,63,4516	0/0:19,0:19:57.18:0,57,3992	0/0:17,0:17:51.18:0,51,3274	0/0:21,0:21:57.20:0,57,3885	0/0:14,0:14:42.14:0,42,2789	0/0:12,0:12:33.11:0,33,2022	1/1:4,6:10:18.06:802,18,0	1/1:4,16:20:45.15:2005,45,0	1/1:4,2:6:6.02:264,6,0	0/0:34,0:34:99:0,102,7100	0/0:26,0:26:78.27:0,78,5235	0/0:18,0:18:48.15:0,48,3258	0/0:23,0:23:63.22:0,63,3497	1/1:5,14:19:33.11:1471,33,0	1/1:6,9:15:27.09:1201,27,0	1/1:2,8:10:21.07:936,21,0
chr10	44833727	.	G	GGAAAATAAAACA	15582.76	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=1.507;DP=604;FS=4.201;HRun=0;HaplotypeScore=210.3810;InbreedingCoeff=0.9866;MQ=88.81;MQ0=0;MQRankSum=-13.488;QD=120.80;ReadPosRankSum=-1.740;VQSLOD=4.6811;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,5:13:15.05:677,15,0	0/0:9,0:9:27.09:0,27,976	0/0:32,0:32:79.54:0,80,2723	0/0:19,0:19:57.17:0,57,1772	1/1:6,15:28:57.16:2642,57,0	0/0:18,0:18:54.08:0,54,1728	0/0:19,0:19:51.14:0,51,1605	0/0:26,0:26:69.23:0,69,2262	0/0:26,0:26:72.23:0,72,2548	0/0:23,0:23:69.24:0,69,2574	0/0:29,0:29:84.14:0,84,2981	0/0:39,0:39:99:0,117,4197	0/0:20,0:20:57.18:0,57,1989	0/0:27,0:27:81.25:0,81,2690	0/0:20,0:20:60.21:0,60,2105	0/0:21,0:21:63.22:0,63,2241	0/0:30,0:30:90.29:0,90,3316	0/0:24,0:24:72.10:0,72,2253	1/1:9,3:12:24.08:1210,24,0	1/1:8,20:28:78.27:4293,78,0	1/1:9,1:10:24.07:838,24,0	0/0:29,0:29:84.29:0,84,3101	0/0:20,0:20:60.14:0,60,2090	0/0:22,0:22:66.20:0,66,2118	0/0:22,0:22:66.23:0,66,2393	1/1:6,5:11:30.10:1729,30,0	1/1:11,12:23:66.18:3666,66,0	1/1:0,4:4:9.03:526,9,0
chr10	44833763	.	AT	A	2544.82	PASS	AB=1.000;AC=17;AF=0.315;AN=54;BaseQRankSum=11.404;DP=571;FS=9.406;HRun=8;HaplotypeScore=111.1012;InbreedingCoeff=0.9196;MQ=75.22;MQ0=0;MQRankSum=-11.580;QD=17.43;ReadPosRankSum=0.745;VQSLOD=2.5833;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,15:17:27.03:261,27,0	1/1:0,8:8:24.04:232,24,0	0/1:23,0:19:8.23:8,0,390	0/0:12,0:13:16.13:0,16,183	1/1:3,16:19:39.02:368,39,0	0/0:18,0:18:51.16:0,51,616	0/0:22,0:22:63.19:0,63,760	0/0:18,0:18:51.15:0,51,605	0/0:33,0:33:87.20:0,87,1008	0/0:26,0:26:75.19:0,75,890	0/0:23,0:23:69.21:0,69,833	0/0:34,0:34:87.27:0,87,1050	0/0:19,0:19:54.08:0,54,633	0/0:17,0:17:48.13:0,48,566	0/0:25,0:25:66.19:0,66,786	0/0:31,0:31:90.26:0,90,1076	0/0:33,0:33:96.26:0,96,1135	0/0:22,0:22:57.17:0,57,688	1/1:3,12:15:36.05:348,36,0	1/1:3,24:27:69.11:665,69,0	1/1:2,5:7:15.02:145,15,0	0/0:27,0:27:75.22:0,75,896	0/0:26,0:26:72.22:0,72,868	0/0:19,0:19:51.16:0,51,616	0/0:18,0:18:48.15:0,48,580	1/1:1,10:11:27.04:261,27,0	1/1:2,17:19:48.07:463,48,0	./.
chr10	44833829	.	A	AG	4857.82	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=13.621;DP=594;FS=1.746;HRun=1;HaplotypeScore=132.3187;InbreedingCoeff=0.9685;MQ=80.02;MQ0=0;MQRankSum=-11.652;QD=35.98;ReadPosRankSum=1.632;VQSLOD=4.5724;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,21:26:60.20:896,60,0	0/0:6,0:6:18.05:0,18,219	0/0:23,0:23:38.76:0,39,686	0/0:21,0:21:59.38:0,59,714	1/1:2,14:16:30.10:446,30,0	0/0:21,0:21:57.17:0,57,724	0/0:21,0:21:60.18:0,60,765	0/0:33,0:33:99:0,99,1272	0/0:30,0:30:87.27:0,87,1117	0/0:24,0:24:72.23:0,72,934	0/0:17,0:17:51.17:0,51,662	0/0:24,0:24:72.22:0,72,922	0/0:19,0:19:54.18:0,54,700	0/0:26,0:26:78.24:0,78,998	0/0:38,0:38:99:0,114,1479	0/0:38,0:38:99:0,111,1426	0/0:24,0:24:29.20:0,29,853	0/0:14,0:14:42.10:0,42,527	1/1:1,12:9:24.08:337,24,0	1/1:0,32:32:78.26:1164,78,0	1/1:2,11:13:36.12:538,36,0	0/0:15,0:15:45.15:0,45,583	0/0:28,0:28:81.26:0,81,1051	0/0:15,0:15:39.13:0,39,506	0/0:22,0:22:66.19:0,66,830	1/1:0,17:17:51.17:763,51,0	1/1:1,15:15:45.15:669,45,0	1/1:1,1:2:3.01:45,3,0
chr10	44833930	.	TG	T	4734.67	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=16.009;DP=556;FS=9.844;HRun=2;HaplotypeScore=114.3817;InbreedingCoeff=0.9936;MQ=75.87;MQ0=0;MQRankSum=-10.211;QD=34.06;ReadPosRankSum=0.360;VQSLOD=3.5623;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,37:38:99:1282,102,0	0/0:9,0:9:27.06:0,27,382	0/0:17,0:17:51.17:0,51,722	0/0:33,0:33:74.33:0,74,1212	1/1:1,11:12:21.07:272,21,0	0/0:20,0:20:60.20:0,60,898	0/0:14,0:14:42.12:0,42,592	0/0:27,0:27:78.24:0,78,1117	0/0:31,0:31:90.25:0,90,1251	0/0:23,0:23:63.21:0,63,924	0/0:18,0:18:54.18:0,54,808	0/0:29,0:29:84.24:0,84,1198	0/0:20,0:20:60.20:0,60,899	0/0:28,0:28:84.27:0,84,1231	0/0:25,0:25:69.22:0,69,998	0/0:21,0:21:63.21:0,63,943	0/0:16,0:16:45.13:0,45,650	0/0:14,0:14:39.08:0,39,555	1/1:0,11:11:30.10:389,30,0	1/1:0,9:9:27.02:329,27,0	1/1:0,20:20:54.11:679,54,0	0/0:10,0:10:30.10:0,30,446	0/0:15,0:15:45.15:0,45,674	0/0:20,0:20:60.20:0,60,898	0/0:27,0:27:75.25:0,75,1124	1/1:1,20:21:63.16:787,63,0	1/1:2,22:24:69.16:860,69,0	1/1:0,4:4:12:137,12,0
chr10	44833986	.	T	TG	10445.08	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=11.737;DP=536;FS=6.826;HRun=0;HaplotypeScore=104.9078;InbreedingCoeff=0.9871;MQ=84.98;MQ0=0;MQRankSum=-7.038;QD=40.80;ReadPosRankSum=0.503;VQSLOD=4.6289;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,19:20:59.86:753,60,0	0/0:4,0:4:12.04:0,12,168	0/0:25,0:26:65.99:0,66,775	0/0:28,0:28:80.52:0,81,943	1/1:3,16:19:41.96:583,42,0	0/0:20,0:20:54.15:0,54,708	0/0:13,0:13:39.12:0,39,528	0/0:30,0:30:90.28:0,90,1228	0/0:31,0:31:93.30:0,93,1283	1/1:0,19:19:54.14:818,54,0	1/1:0,26:26:72.24:1128,72,0	0/0:21,0:21:63.18:0,63,847	0/0:19,0:19:57.17:0,57,764	0/0:26,0:26:78.24:0,78,1061	1/1:1,29:30:81.28:1294,81,0	1/1:0,27:27:81.28:1294,81,0	0/0:14,0:14:42.14:0,42,587	1/1:0,12:12:30.10:475,30,0	1/1:2,7:8:21.03:307,21,0	1/1:2,10:12:33.08:456,33,0	1/1:1,14:15:42:563,42,0	0/0:17,0:17:51.14:0,51,677	0/0:17,0:17:51.15:0,51,682	0/0:14,0:14:42.14:0,42,587	1/1:0,27:27:75.26:1199,75,0	1/1:4,15:19:54.09:785,54,0	1/1:3,15:18:51.07:722,51,0	1/1:3,0:3:8.97:70,9,0
chr10	44834023	.	A	AT	4298.26	PASS	AB=0.779;AC=16;AF=0.286;AN=56;BaseQRankSum=13.025;DP=519;FS=15.689;HRun=4;HaplotypeScore=105.6659;InbreedingCoeff=0.8619;MQ=81.37;MQ0=0;MQRankSum=-11.460;QD=29.04;ReadPosRankSum=0.190;VQSLOD=3.1134;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,12:14:33.11:450,33,0	0/0:8,0:8:21.06:0,21,238	0/0:16,0:16:42.10:0,42,462	0/1:15,0:15:5.32:5,0,216	1/1:3,12:16:30.06:388,30,0	0/0:23,0:23:66.19:0,66,749	0/0:9,0:9:21.06:0,21,238	0/0:35,0:35:99:0,99,1121	0/0:28,0:28:78.20:0,78,867	0/0:18,0:18:48.11:0,48,526	0/0:28,0:28:84.23:0,84,944	0/0:18,0:18:48.14:0,48,545	0/0:21,0:21:57.16:0,57,647	0/0:18,0:18:54.15:0,54,612	0/0:31,0:31:87.25:0,87,987	0/0:22,0:22:63.18:0,63,714	0/0:17,0:17:42.12:0,42,476	0/0:11,0:11:33.06:0,33,352	1/1:2,16:18:51.17:696,51,0	1/1:1,19:20:54.09:696,54,0	1/1:0,14:14:27:327,27,0	0/0:18,0:18:51.15:0,51,579	0/0:16,0:16:45.13:0,45,510	0/0:12,0:12:30.04:0,30,326	0/0:22,0:22:63.18:0,63,715	0/1:5,19:24:4.88:716,0,5	1/1:0,22:22:60.20:815,60,0	1/1:0,5:5:15.05:205,15,0
chr10	44834739	.	CTTATTCACA	C	10387.22	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=15.385;DP=516;FS=12.914;HRun=0;HaplotypeScore=170.8098;InbreedingCoeff=0.9540;MQ=83.32;MQ0=0;MQRankSum=-14.132;QD=52.20;ReadPosRankSum=3.118;VQSLOD=4.1316;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,8:10:15.05:437,15,0	0/0:12,0:12:30.10:0,30,1320	0/0:24,0:24:52.06:0,52,2127	0/0:19,0:19:44.36:0,44,1589	1/1:8,10:18:24.07:579,24,0	0/0:35,0:35:87.30:0,87,3982	0/0:17,0:17:45.15:0,45,1905	0/0:33,0:33:75.26:0,75,3190	0/0:28,0:28:75.26:0,75,3462	1/1:3,12:15:33.10:846,33,0	1/1:1,17:18:48.16:1247,48,0	0/0:18,0:18:48.16:0,48,2125	0/0:28,0:28:81.28:0,81,3785	0/0:14,0:14:42.10:0,42,1781	1/1:3,9:12:24.08:634,24,0	1/1:2,8:10:18.06:525,18,0	0/0:22,0:22:51.18:0,51,2329	1/1:2,3:5:3.01:87,3,0	1/1:6,5:11:15.03:315,15,0	1/1:4,14:18:39.13:1111,39,0	1/1:2,6:8:9.03:231,9,0	0/0:34,0:34:87.30:0,87,3894	0/0:24,0:24:69.24:0,69,3188	0/0:9,0:9:27.09:0,27,1274	1/1:5,13:18:45.15:1224,45,0	1/1:4,15:18:36.12:1050,36,0	1/1:8,22:30:63.22:1837,63,0	1/1:4,3:7:9.03:262,9,0
chr10	44834808	.	T	TGA	3003.90	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=12.265;DP=488;FS=28.675;HRun=0;HaplotypeScore=154.0441;InbreedingCoeff=0.9626;MQ=63.74;MQ0=2;MQRankSum=-9.415;QD=50.07;ReadPosRankSum=5.298;VQSLOD=1.8578;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:39.13:0,39,635	0/0:14,0:14:42.14:0,42,685	0/0:24,0:24:31.75:0,32,1013	0/0:18,0:18:45.15:0,45,692	0/0:20,0:20:42.14:0,42,681	0/0:26,0:26:72.21:0,72,1122	0/0:14,0:14:42.14:0,42,685	0/0:29,0:29:87.23:0,87,1364	0/0:25,0:25:63.19:0,63,978	1/1:0,14:14:42.14:775,42,0	1/1:0,13:14:39.03:664,39,0	0/0:14,0:14:36.12:0,36,586	0/0:16,0:16:45.15:0,45,729	0/0:12,0:12:30.10:0,30,488	1/1:0,9:9:27.09:489,27,0	1/1:0,4:4:12.04:219,12,0	0/0:15,0:15:45.11:0,45,704	1/1:0,2:2:6.02:110,6,0	0/0:19,0:17:48.15:0,48,747	0/0:30,0:29:66.23:0,66,1073	0/0:8,0:8:21.07:0,21,342	0/0:30,0:30:84.29:0,84,1367	0/0:29,0:29:72.25:0,72,1174	0/0:11,0:11:24.08:0,24,391	1/1:0,17:17:51.17:929,51,0	0/0:23,1:23:13.37:0,13,966	0/0:26,0:26:72.25:0,72,1164	0/0:7,0:7:15.05:0,15,244
chr10	44834810	.	T	TG	1055.63	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=12.245;DP=492;FS=26.810;HRun=0;HaplotypeScore=157.3480;InbreedingCoeff=0.9607;MQ=63.45;MQ0=2;MQRankSum=-9.637;QD=17.59;ReadPosRankSum=6.520;VQSLOD=2.4285;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:39.13:0,39,544	0/0:14,0:14:42.14:0,42,587	0/0:25,0:24:69.21:0,69,907	0/0:18,0:18:45.12:0,45,582	0/0:22,0:22:51.04:0,51,645	0/0:25,0:25:72.23:0,72,991	0/0:15,0:15:45.14:0,45,612	0/0:28,0:28:80.87:0,81,1131	0/0:26,0:26:66.16:0,66,838	1/1:0,14:14:41.39:320,41,0	1/1:1,13:14:11.93:214,12,0	0/0:14,0:14:42.07:0,42,545	0/0:16,0:16:45.14:0,45,612	0/0:13,0:13:39.03:0,39,468	1/1:0,9:9:26.81:192,27,0	1/1:0,4:4:11.92:86,12,0	0/0:15,0:15:45.15:0,45,628	1/1:0,2:2:6:53,6,0	0/0:17,0:15:42.14:0,42,585	0/0:32,0:31:78.12:0,78,1005	0/0:8,0:8:21.07:0,21,293	0/0:29,0:29:81.26:0,81,1117	0/0:30,0:30:81.18:0,81,1071	0/0:11,0:11:27.06:0,27,356	1/1:0,17:17:50.65:370,51,0	0/0:23,1:23:46.16:0,46,892	0/0:27,0:27:75.25:0,75,1042	0/0:7,0:7:15.05:0,15,209
chr10	44834812	.	T	TTAAAG	4588.39	PASS	AB=0.960;AC=13;AF=0.232;AN=56;BaseQRankSum=11.476;DP=496;FS=31.358;HRun=0;HaplotypeScore=181.6588;InbreedingCoeff=0.8755;MQ=64.29;MQ0=2;MQRankSum=-9.210;QD=54.62;ReadPosRankSum=6.927;VQSLOD=3.5050;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:42.14:0,42,946	0/0:14,0:14:42.14:0,42,979	0/0:27,0:26:68.38:0,68,1310	0/0:19,0:18:41.93:0,42,911	0/0:23,0:23:57.15:0,57,1186	0/0:27,0:27:75.24:0,75,1642	0/0:15,0:15:45.15:0,45,1016	0/0:28,0:28:84.29:0,84,1901	0/0:23,0:23:60.21:0,60,1338	1/1:0,14:14:42.14:1107,42,0	1/1:0,13:14:34.08:940,34,0	0/0:14,0:14:42.14:0,42,949	0/0:16,0:16:48.08:0,48,1016	0/0:12,0:12:36.12:0,36,804	1/1:0,9:9:27.09:710,27,0	1/1:0,4:4:12.04:315,12,0	0/0:15,0:15:45.15:0,45,1022	1/1:0,2:2:6.02:161,6,0	0/0:17,0:15:42.12:0,42,895	0/0:32,0:31:87.30:0,87,1840	0/0:8,0:8:21.07:0,21,489	0/0:28,0:28:84.29:0,84,1897	0/0:32,0:32:90.28:0,90,1885	0/0:11,0:11:33.11:0,33,695	1/1:0,17:17:51.18:1347,51,0	0/1:23,1:23:9.25:9,0,1406	0/0:27,0:27:78.27:0,78,1786	0/0:6,0:6:12.04:0,12,279
chr10	44834839	.	AACACACAC	A	6827.38	PASS	AB=0.633;AC=37;AF=0.685;AN=54;BaseQRankSum=7.634;DP=495;FS=4.518;HRun=0;HaplotypeScore=207.1566;InbreedingCoeff=0.4589;MQ=52.55;MQ0=6;MQRankSum=-8.799;QD=19.18;ReadPosRankSum=1.131;VQSLOD=4.2553;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:15,8:24:24.08:584,24,0	0/0:15,0:15:30.10:0,30,1209	0/0:24,0:18:12.04:0,12,290	0/0:18,0:14:9.03:0,9,291	1/1:13,14:27:33.07:757,33,0	0/0:14,0:27:45.13:0,45,930	0/0:13,0:14:23.60:0,24,643	./.	0/0:7,0:20:30.09:0,30,612	1/1:21,0:21:18.06:335,18,0	1/1:13,0:13:24.08:447,24,0	0/1:4,1:14:10.89:159,0,11	0/1:7,3:15:11.05:320,0,11	1/1:6,1:13:17.52:155,18,0	1/1:11,0:11:6.02:112,6,0	1/1:6,0:6:6.02:112,6,0	1/1:12,0:15:12.04:224,12,0	1/1:3,0:3:6.02:112,6,0	1/1:5,3:8:1.30:145,1,0	1/1:12,18:32:23.19:1076,23,0	1/1:8,0:10:3.01:55,3,0	0/1:13,1:28:37.01:180,0,37	0/1:19,0:36:74.70:182,0,75	1/1:6,0:12:14.51:79,15,0	1/1:19,0:19:21.07:391,21,0	1/1:11,7:18:24.08:599,24,0	1/1:15,8:24:27.08:664,27,0	0/1:2,4:6:18.06:141,0,18
chr10	44834855	.	CACACACACACACACACACACAA	C	5088.33	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=5.686;DP=470;FS=0.733;HRun=0;HaplotypeScore=287.8084;InbreedingCoeff=0.9001;MQ=45.51;MQ0=8;MQRankSum=-5.671;QD=175.46;ReadPosRankSum=5.518;VQSLOD=3.9521;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:57.60:0,58,2684	0/0:14,0:14:42.12:0,42,3407	0/0:29,0:16:48.16:0,48,2702	0/0:16,0:11:33.11:0,33,1758	0/0:30,0:30:68.05:0,68,3002	0/0:24,0:23:63.60:0,64,4516	0/0:17,0:17:41.73:0,42,3189	1/1:1,0:1:3:27,3,0	0/0:20,0:19:42.14:0,42,3287	1/1:0,6:6:18.06:1126,18,0	1/1:0,8:8:24.08:1498,24,0	0/0:18,0:17:45.09:0,45,2532	0/0:16,0:16:45.15:0,45,2517	0/0:12,0:12:33.05:0,33,1649	1/1:0,2:2:6.02:375,6,0	1/1:0,3:3:6.02:375,6,0	0/0:21,0:19:44.53:0,45,1264	1/1:0,2:2:6.02:376,6,0	0/0:11,0:11:30.10:0,30,1595	0/0:35,0:35:99:0,102,4737	0/0:12,0:12:15.44:0,15,486	0/0:34,0:33:84.57:0,85,4321	0/0:36,0:36:93.25:0,93,4812	0/0:15,0:15:27.09:0,27,1372	1/1:0,7:7:21.07:1312,21,0	0/0:15,0:15:45.15:0,45,2294	0/0:25,0:25:63.08:0,63,2781	0/0:9,0:9:20.66:0,21,873
chr10	44834947	.	G	GGTATGTATCTGTATATGTAT	12700.43	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-5.006;DP=645;FS=10.865;HRun=0;HaplotypeScore=342.8192;InbreedingCoeff=0.9838;MQ=85.95;MQ0=0;MQRankSum=-9.570;QD=120.96;ReadPosRankSum=2.056;VQSLOD=3.7116;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,111,5213	0/0:16,0:15:45.14:0,45,2225	0/0:35,0:35:93.27:0,93,3108	0/0:18,0:18:41.81:0,42,1369	0/0:32,0:32:93.32:0,93,4683	0/0:28,0:28:75.26:0,75,3864	0/0:28,0:28:72.23:0,72,3568	0/0:28,0:28:78.22:0,78,3029	0/0:22,0:22:63.22:0,63,3253	1/1:13,5:26:60.11:3584,60,0	1/1:16,3:19:18.06:1703,18,0	0/0:20,0:20:57.18:0,57,2742	0/0:24,0:24:69.16:0,69,2986	0/0:18,0:18:51.16:0,51,2322	1/1:4,4:12:18.06:1648,18,0	1/1:4,4:15:21.07:1763,21,0	0/0:16,0:16:39.13:0,39,2011	1/1:4,1:6:9.03:631,9,0	0/0:22,0:22:60.16:0,60,2479	0/0:29,0:29:84.26:0,84,3696	0/0:22,0:22:54.18:0,54,2521	0/0:24,0:24:66.23:0,66,3296	0/0:28,0:28:81.28:0,81,4005	0/0:14,0:14:30.10:0,30,1385	1/1:9,11:25:36.12:3372,36,0	0/0:16,0:16:42.14:0,42,2031	0/0:29,0:29:72.23:0,72,3346	0/0:22,0:22:63.22:0,63,2675
chr10	44834950	.	A	ATG	801.49	PASS	AB=1.000;AC=8;AF=0.143;AN=56;BaseQRankSum=10.503;DP=630;FS=2.921;HRun=0;HaplotypeScore=156.8278;InbreedingCoeff=0.3805;MQ=88.56;MQ0=0;MQRankSum=-8.779;QD=9.54;ReadPosRankSum=4.043;VQSLOD=3.4709;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,120,1787	0/0:17,0:16:48.15:0,48,711	0/0:35,0:35:99:0,105,1529	0/0:20,0:20:44.81:0,45,618	0/0:32,0:32:93.32:0,93,1423	0/0:27,0:27:78.26:0,78,1191	0/0:30,0:30:78.22:0,78,1129	0/0:27,0:27:78.26:0,78,1193	0/0:22,0:22:63.21:0,63,964	0/1:19,0:18:30.06:252,0,30	1/1:10,8:17:17.89:156,18,0	0/0:20,0:20:60.20:0,60,913	0/0:24,0:24:69.20:0,69,1011	0/0:20,0:20:51.17:0,51,780	0/1:9,0:9:11.29:112,0,11	0/1:11,0:11:29.49:121,0,29	0/0:15,0:15:39.13:0,39,596	0/1:5,0:5:19.74:20,0,42	0/0:22,0:22:60.16:0,60,887	0/0:29,0:29:87.27:0,87,1288	0/0:22,0:22:54.18:0,54,821	0/0:24,0:24:69.23:0,69,1054	0/0:28,0:28:81.27:0,81,1234	0/0:13,0:13:30.10:0,30,458	1/1:22,0:22:5.23:281,5,0	0/0:18,0:18:51.11:0,51,713	0/0:27,0:27:75.25:0,75,1142	0/0:23,0:23:66.21:0,66,989
chr10	44835265	.	AAGATC	A	4141.89	PASS	AC=10;AF=0.185;AN=54;BaseQRankSum=11.007;DP=779;FS=10.284;HRun=0;HaplotypeScore=168.6768;InbreedingCoeff=0.9890;MQ=63.24;MQ0=1;MQRankSum=-11.527;QD=41.42;ReadPosRankSum=1.788;VQSLOD=3.0672;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:46:99:0,135,4123	0/0:20,0:20:57.20:0,57,1790	0/0:37,0:33:89.95:0,90,2712	0/0:37,0:34:54.68:0,55,2641	0/0:45,0:44:99:0,111,3352	0/0:25,0:25:72.25:0,72,2248	0/0:34,0:34:99:0,99,3070	0/0:30,0:30:84.29:0,84,2558	0/0:32,0:32:96.33:0,96,3028	1/1:1,18:19:51.12:997,51,0	./.	0/0:24,0:24:66.23:0,66,1997	0/0:32,0:32:93.31:0,93,2826	0/0:43,0:43:99:0,123,3778	1/1:3,30:26:63.22:1366,63,0	1/1:1,23:20:57.16:1192,57,0	0/0:25,0:25:69.24:0,69,2189	1/1:3,10:11:15.05:326,15,0	0/0:21,0:18:51.18:0,51,1584	0/0:24,0:21:63.22:0,63,1916	0/0:43,0:43:99:0,120,3716	0/0:26,0:26:69.21:0,69,2046	0/0:33,0:33:84.29:0,84,2577	0/0:24,0:24:72.25:0,72,2231	1/1:3,8:7:12.04:260,12,0	0/0:27,0:22:63.22:0,63,1981	0/0:27,0:26:60.21:0,60,1891	0/0:18,0:18:51.13:0,51,1490
chr10	44835628	.	G	GC	119.57	PASS	AB=0.667;AC=9;AF=0.180;AN=50;BaseQRankSum=7.076;DP=573;FS=40.310;HRun=0;HaplotypeScore=98.6182;InbreedingCoeff=0.7148;MQ=49.68;MQ0=36;MQRankSum=-5.686;QD=2.39;ReadPosRankSum=-1.704;VQSLOD=0.8162;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,6:2:2.88:15,3,0	0/0:18,0:15:33.11:0,33,459	0/0:33,0:2:6.02:0,6,75	0/0:29,0:4:8.67:0,9,94	1/1:3,13:8:13.78:61,14,0	0/0:20,0:19:51.17:0,51,702	0/0:30,0:30:53.67:0,54,718	0/0:22,0:17:51.17:0,51,711	0/0:45,0:45:99:0,99,1366	0/0:18,0:15:31.62:0,32,242	0/0:8,0:7:14.99:0,15,128	0/0:35,0:35:96.12:0,96,1336	0/0:37,0:37:87.26:0,87,1217	0/0:40,0:40:96.32:0,96,1342	0/0:24,0:22:50.92:0,51,416	0/0:21,0:21:50.90:0,51,410	0/0:31,0:30:72.21:0,72,986	0/0:11,0:10:20.74:0,21,153	./.	1/1:4,13:11:28.68:151,29,0	./.	0/0:30,0:30:63.21:0,63,880	0/0:16,0:16:45.15:0,45,629	0/0:27,0:25:60.20:0,60,837	0/0:21,0:18:41.33:0,41,320	0/1:3,3:3:13.03:13,0,35	./.	1/1:1,2:1:2.96:19,3,0
chr10	44835860	.	A	AAGGGC	6902.42	PASS	AC=22;AF=0.478;AN=46;BaseQRankSum=10.305;DP=490;FS=5.935;HRun=0;HaplotypeScore=101.9263;InbreedingCoeff=0.9108;MQ=81.84;MQ0=1;MQRankSum=-12.399;QD=51.90;ReadPosRankSum=-2.175;VQSLOD=4.2010;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,2:5:6.02:199,6,0	1/1:1,8:7:12.04:393,12,0	0/0:31,0:30:80.45:0,80,1793	0/0:28,0:28:84.17:0,84,1733	./.	0/0:27,0:27:81.25:0,81,1793	0/0:26,0:26:78.25:0,78,1772	1/1:11,7:18:45.13:1250,45,0	0/0:28,0:28:84.27:0,84,1895	1/1:3,14:12:33.11:975,33,0	1/1:2,13:13:30.06:890,30,0	0/0:31,0:31:93.31:0,93,2116	0/0:29,0:29:84.29:0,84,1906	0/0:25,0:25:75.24:0,75,1652	1/1:6,13:20:30.10:934,30,0	1/1:3,14:17:36.12:1175,36,0	0/0:38,0:38:99:0,114,2564	1/1:2,2:5:12.04:391,12,0	./.	./.	1/1:0,1:3:3.01:98,3,0	0/0:31,0:31:69.24:0,69,1607	0/0:30,0:30:75.24:0,75,1681	0/0:30,0:30:90.31:0,90,2096	1/1:0,10:7:15.05:497,15,0	1/1:1,0:1:3.01:99,3,0	./.	./.
chr10	44836274	.	AT	A	128.46	PASS	AC=8;AF=0.160;AN=50;BaseQRankSum=4.183;DP=494;FS=5.121;HRun=1;HaplotypeScore=74.0157;InbreedingCoeff=0.7657;MQ=80.90;MQ0=0;MQRankSum=-4.474;QD=21.41;ReadPosRankSum=-3.327;VQSLOD=2.7457;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,3:3:9.03:126,9,0	0/0:8,0:8:24.08:0,24,380	0/0:36,0:36:99:0,108,1489	0/0:33,0:33:75.15:0,75,1210	./.	0/0:25,0:25:75.24:0,75,1175	0/0:21,0:21:63.21:0,63,1006	0/0:30,0:30:87.27:0,87,1346	0/0:34,0:34:93.29:0,93,1437	0/0:26,0:26:78.16:0,78,1215	0/0:21,0:21:51.13:0,51,786	0/0:19,0:19:51.13:0,51,790	0/0:22,0:22:66.21:0,66,1031	0/0:25,0:25:75.24:0,75,1166	0/0:35,0:35:90.29:0,90,1405	0/0:19,0:19:54.17:0,54,840	0/0:22,0:22:57.19:0,57,911	0/0:16,0:16:42.07:0,42,616	1/1:0,1:1:3.01:42,3,0	./.	1/1:0,1:1:3.01:42,3,0	0/0:28,0:28:84.29:0,84,1340	0/0:23,0:23:55.24:0,55,947	0/0:21,0:21:63.18:0,63,958	0/0:23,0:23:63.21:0,63,997	0/0:1,0:1:3.01:0,3,48	1/1:0,1:1:3.01:42,3,0	./.
chr10	44836415	.	GA	G	2923.01	PASS	AB=1.000;AC=13;AF=0.325;AN=40;BaseQRankSum=11.313;DP=359;FS=11.925;HRun=6;HaplotypeScore=66.5629;InbreedingCoeff=0.8954;MQ=83.57;MQ0=0;MQRankSum=-1.384;QD=22.14;ReadPosRankSum=1.758;VQSLOD=2.2516;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	0/0:4,0:4:12.04:0,12,158	0/1:13,0:13:7.26:7,0,278	0/0:16,0:15:20.77:0,21,231	./.	0/0:18,0:18:48.16:0,48,631	0/0:9,0:9:27.09:0,27,352	0/0:31,0:31:90.28:0,90,1171	0/0:20,0:20:54.16:0,54,689	1/1:1,27:28:81.19:863,81,0	1/1:1,25:26:60.15:641,60,0	0/0:13,0:13:39.13:0,39,508	0/0:17,0:17:42.14:0,42,552	0/0:17,0:17:51.17:0,51,670	1/1:1,10:11:27.07:290,27,0	1/1:1,16:17:48.12:516,48,0	0/0:16,0:16:42.14:0,42,547	1/1:0,16:16:36.09:387,36,0	./.	./.	./.	0/0:26,0:26:66.18:0,66,837	0/0:29,0:29:69.21:0,69,894	0/0:11,0:11:33.11:0,33,434	1/1:3,18:21:36.09:387,36,0	./.	./.	./.
chr10	44837150	.	CAT	C	6207.25	PASS	AC=14;AF=0.350;AN=40;BaseQRankSum=12.518;DP=348;FS=1.339;HRun=0;HaplotypeScore=76.8264;InbreedingCoeff=0.9978;MQ=86.44;MQ0=0;MQRankSum=-2.466;QD=41.94;ReadPosRankSum=-0.578;VQSLOD=6.3775;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	0/0:10,0:10:30.10:0,30,579	0/0:18,0:18:49.05:0,49,851	0/0:14,0:13:36.01:0,36,627	./.	0/0:23,0:23:66.23:0,66,1247	0/0:9,0:9:21.06:0,21,372	1/1:2,24:26:72.20:1021,72,0	0/0:24,0:24:69.22:0,69,1298	1/1:1,30:31:87.29:1313,87,0	1/1:1,23:24:66.14:980,66,0	0/0:16,0:16:48.16:0,48,927	0/0:26,0:26:78.22:0,78,1468	0/0:8,0:8:21.07:0,21,393	1/1:0,16:16:42.14:643,42,0	1/1:0,10:10:30.10:459,30,0	0/0:13,0:13:36.12:0,36,693	1/1:0,14:14:42.14:642,42,0	./.	./.	./.	0/0:14,0:14:42.10:0,42,773	0/0:16,0:16:48.14:0,48,847	0/0:9,0:9:27.05:0,27,483	1/1:0,27:27:75.25:1148,75,0	./.	./.	./.
chr10	44837538	.	G	GT	323.15	PASS	AC=2;AF=0.048;AN=42;BaseQRankSum=-4.554;DP=380;FS=1.176;HRun=6;HaplotypeScore=91.2242;InbreedingCoeff=0.8551;MQ=72.54;MQ0=0;MQRankSum=-2.347;QD=26.93;ReadPosRankSum=1.771;VQSLOD=3.9986;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	0/0:10,0:10:30.07:0,30,306	0/0:16,0:16:37.29:0,37,358	0/0:7,0:5:8.98:0,9,81	./.	0/0:26,0:26:69.15:0,69,704	0/0:12,0:12:27.06:0,27,276	0/0:40,0:40:99:0,105,1071	0/0:17,0:17:48.11:0,48,490	0/0:24,0:24:69.16:0,69,704	0/0:32,0:32:87.17:0,87,873	1/1:1,11:12:33.11:415,33,0	0/0:15,0:15:39.08:0,39,398	0/0:17,0:17:45.10:0,45,459	0/0:16,0:16:48.09:0,48,482	0/0:19,0:19:54.11:0,54,544	0/0:24,0:24:69.11:0,69,687	0/0:15,0:15:36.08:0,36,366	./.	./.	./.	0/0:12,0:12:36.08:0,36,367	0/0:18,0:18:51.11:0,51,520	0/0:17,0:16:36.08:0,36,367	0/0:28,0:28:69.04:0,69,698	0/0:2,0:2:6.01:0,6,61	./.	./.
chr10	44837576	.	TA	T	5513.08	PASS	AC=16;AF=0.381;AN=42;BaseQRankSum=13.418;DP=350;FS=8.227;HRun=4;HaplotypeScore=79.8945;InbreedingCoeff=0.9863;MQ=77.18;MQ0=0;MQRankSum=-3.115;QD=33.01;ReadPosRankSum=-1.221;VQSLOD=4.6531;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	0/0:9,0:9:24.08:0,24,336	0/0:16,0:15:40.49:0,40,539	0/0:8,0:7:20.28:0,20,256	./.	0/0:21,0:21:57.19:0,57,798	0/0:7,0:7:21.07:0,21,294	1/1:3,31:34:93.20:1073,93,0	0/0:16,0:16:45.09:0,45,590	1/1:3,23:26:69.18:803,69,0	1/1:0,28:28:81.21:955,81,0	0/0:14,0:14:42.14:0,42,588	0/0:14,0:14:42.13:0,42,570	0/0:18,0:18:51.17:0,51,714	1/1:0,16:16:48.15:575,48,0	1/1:0,21:21:63.19:756,63,0	0/0:18,0:18:54.17:0,54,738	1/1:0,12:12:33.06:379,33,0	./.	./.	./.	0/0:15,0:15:42.14:0,42,587	0/0:17,0:17:51.17:0,51,714	0/0:9,0:9:27.08:0,27,360	1/1:1,26:27:72.22:864,72,0	1/1:0,3:3:9.03:108,9,0	./.	./.
chr10	44837721	.	CTGT	C	2501.82	PASS	AB=0.861;AC=27;AF=0.643;AN=42;BaseQRankSum=7.002;DP=278;FS=22.231;HRun=0;HaplotypeScore=82.6860;InbreedingCoeff=0.6958;MQ=69.80;MQ0=1;MQRankSum=-2.174;QD=12.03;ReadPosRankSum=1.377;VQSLOD=1.6880;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	0/0:5,0:5:12.02:0,12,158	0/0:21,0:17:12.80:0,13,279	0/0:8,0:5:8.14:0,8,106	./.	0/0:14,0:14:42.06:0,42,543	0/0:9,0:9:21.03:0,21,242	1/1:0,0:23:57.06:390,57,0	0/0:13,0:13:33.06:0,33,419	1/1:17,0:17:41.84:349,42,0	1/1:11,1:15:24.12:230,24,0	1/1:9,0:9:11.93:101,12,0	0/1:11,0:11:40.44:121,0,40	1/1:13,0:13:26.97:223,27,0	1/1:5,17:22:15.05:178,15,0	1/1:13,1:16:34.53:343,35,0	0/1:11,0:11:2.46:2,0,52	1/1:3,12:15:3:25,3,0	./.	./.	./.	0/1:6,15:21:0:0,0,0	1/1:13,0:13:26.97:225,27,0	1/1:8,0:8:17.43:144,17,0	1/1:9,2:13:31.54:307,32,0	1/1:1,0:1:3:27,3,0	./.	./.
chr10	44837733	.	TTGA	T	235.94	PASS	AC=10;AF=0.313;AN=32;BaseQRankSum=5.843;DP=265;FS=21.283;HRun=0;HaplotypeScore=94.1246;InbreedingCoeff=0.7555;MQ=64.52;MQ0=3;MQRankSum=-4.027;QD=3.02;ReadPosRankSum=-0.645;VQSLOD=0.3986;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:4,0:4:5.99:0,6,50	./.	./.	./.	0/0:17,0:17:30.01:0,30,375	0/0:8,0:8:5.99:0,6,50	./.	0/0:12,0:12:17.95:0,18,175	0/0:16,0:16:1.72:0,2,4	1/1:17,0:17:14.61:75,15,0	0/0:9,0:9:14.97:0,15,121	0/0:11,0:11:15.01:0,15,189	0/0:12,0:12:8.79:0,9,63	1/1:19,0:19:14.65:89,15,0	1/1:17,0:17:13.87:83,14,0	1/1:5,6:9:3.01:39,3,0	./.	./.	./.	./.	0/0:19,0:19:11.99:0,12,100	0/0:13,0:13:8.99:0,9,75	0/0:8,0:8:5.99:0,6,49	1/1:14,0:14:13.06:83,13,0	./.	./.	./.
chr10	44837780	.	GATAATA	G	1970.45	PASS	AC=16;AF=0.444;AN=36;BaseQRankSum=6.694;DP=211;FS=0.000;HRun=0;HaplotypeScore=82.5833;InbreedingCoeff=0.7782;MQ=55.19;MQ0=4;MQRankSum=0.401;QD=16.15;ReadPosRankSum=0.451;VQSLOD=2.1090;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	1/1:3,0:3:3.01:50,3,0	0/0:2,0:2:6.02:0,6,84	./.	./.	0/0:20,0:20:57.20:0,57,1354	0/0:7,0:7:15.05:0,15,292	1/1:10,14:22:42.08:700,42,0	0/0:6,0:6:9.03:0,9,249	1/1:1,0:14:24.04:364,24,0	1/1:3,2:21:12.04:213,12,0	0/0:5,0:5:6.02:0,6,174	0/0:10,0:10:24.08:0,24,575	0/0:7,0:7:15.05:0,15,311	1/1:18,2:20:21.07:342,21,0	1/1:3,13:16:9.03:171,9,0	0/0:15,0:14:24.97:0,25,386	1/1:9,0:9:9.03:135,9,0	./.	./.	./.	0/0:5,0:5:3.01:0,3,38	0/0:5,0:5:3.01:0,3,50	./.	1/1:3,12:15:9.03:149,9,0	./.	./.	./.
chr10	44837938	.	GA	G	3618.07	PASS	AB=0.729;AC=16;AF=0.364;AN=44;BaseQRankSum=9.869;DP=281;FS=22.777;HRun=7;HaplotypeScore=40.0748;InbreedingCoeff=0.7387;MQ=64.46;MQ0=2;MQRankSum=-1.702;QD=24.61;ReadPosRankSum=0.144;VQSLOD=1.7617;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	0/0:8,0:8:24.08:0,24,302	0/0:10,0:8:17.83:0,18,190	0/1:10,1:9:10.76:11,0,197	./.	0/0:30,0:30:90.20:0,90,1109	0/0:8,0:8:24.08:0,24,302	1/1:3,30:33:90.20:917,90,0	0/0:6,0:6:18.06:0,18,226	1/1:1,20:21:60.14:612,60,0	1/1:1,22:23:60.13:612,60,0	0/0:11,0:11:33.11:0,33,415	0/0:12,0:12:33.11:0,33,415	0/0:5,0:5:15.05:0,15,189	1/1:1,19:20:54.12:551,54,0	0/1:2,11:13:4.66:273,0,5	0/0:18,0:18:48.11:0,48,575	1/1:1,2:3:6.01:61,6,0	0/0:1,0:1:3.01:0,3,38	./.	./.	0/0:11,0:11:33.11:0,33,415	0/0:8,0:8:24.08:0,24,302	0/0:5,0:5:12.04:0,12,151	1/1:4,18:22:54.12:551,54,0	1/1:0,1:1:3.01:31,3,0	./.	./.
chr10	44838801	.	A	AT	2739.39	PASS	AC=18;AF=0.429;AN=42;BaseQRankSum=1.306;DP=375;FS=0.459;HRun=7;HaplotypeScore=65.3060;InbreedingCoeff=0.9502;MQ=91.37;MQ0=0;MQRankSum=-4.929;QD=26.86;ReadPosRankSum=-2.358;VQSLOD=3.3564;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	1/1:0,5:5:15.05:181,15,0	0/0:15,0:15:27.01:0,27,254	0/0:19,0:19:38.17:0,38,397	./.	0/0:31,0:31:84.13:0,84,809	0/0:27,0:27:72.11:0,72,693	1/1:3,21:24:69.20:823,69,0	0/0:28,0:28:75.10:0,75,719	1/1:3,8:11:27.08:325,27,0	1/1:2,10:12:24.07:289,24,0	0/0:24,0:24:60.08:0,60,579	0/0:27,0:27:72.09:0,72,689	0/0:16,1:17:11.84:0,12,398	1/1:4,14:18:48.12:558,48,0	1/1:1,9:10:30.06:347,30,0	0/0:25,0:25:69.09:0,69,659	1/1:3,6:9:18.06:217,18,0	./.	./.	./.	0/0:21,0:21:51.08:0,51,493	0/0:28,0:28:84.14:0,84,811	0/0:11,0:11:30.05:0,30,290	1/1:6,6:12:12.04:145,12,0	1/1:0,1:1:3.01:36,3,0	./.	./.
chr10	44838833	.	G	GT	4037.81	PASS	AC=16;AF=0.381;AN=42;BaseQRankSum=11.632;DP=378;FS=5.434;HRun=4;HaplotypeScore=68.7667;InbreedingCoeff=0.9628;MQ=95.05;MQ0=0;MQRankSum=-6.646;QD=37.74;ReadPosRankSum=-1.886;VQSLOD=2.8746;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/0:6,0:6:18.05:0,18,204	0/0:16,0:16:45.07:0,45,472	0/0:21,0:21:53.33:0,53,626	./.	0/0:27,0:27:72.20:0,72,817	0/0:19,0:19:42.09:0,42,459	1/1:4,18:22:60.16:761,60,0	0/0:32,0:32:96.24:0,96,1068	1/1:1,14:15:42.14:574,42,0	1/1:1,17:18:51.17:693,51,0	0/0:22,0:22:57.16:0,57,646	0/0:25,0:25:66.17:0,66,739	0/0:19,0:19:54.15:0,54,612	1/1:0,18:18:54.18:738,54,0	1/1:0,13:13:36.12:492,36,0	0/0:22,0:22:60.17:0,60,681	1/1:1,6:7:18.04:229,18,0	./.	./.	./.	0/0:14,0:14:36.10:0,36,408	0/0:32,0:32:93.25:0,93,1043	0/0:16,0:16:42.12:0,42,476	1/1:2,11:13:39.06:510,39,0	1/1:0,1:1:3.01:41,3,0	./.	./.
chr10	44838944	.	T	TAC	1343.86	PASS	AB=0.934;AC=12;AF=0.250;AN=48;BaseQRankSum=1.322;DP=392;FS=2.248;HRun=0;HaplotypeScore=107.0405;InbreedingCoeff=0.4899;MQ=58.67;MQ0=16;MQRankSum=-3.340;QD=8.67;ReadPosRankSum=-0.453;VQSLOD=3.3979;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:7,0:7:0:0,0,0	0/0:15,0:15:17.63:0,18,361	0/0:8,0:6:17.64:0,18,216	0/0:17,0:9:18.74:0,19,239	0/1:11,0:11:0.30:0,0,0	0/0:25,0:25:54.06:0,54,634	0/0:12,0:12:24.05:0,24,325	0/1:10,19:29:17.27:1041,0,17	0/0:15,0:15:30.03:0,30,353	0/1:19,0:21:99:220,0,236	0/1:21,0:21:0:0,0,0	0/0:20,0:20:21.07:0,21,321	0/0:26,0:26:45.51:0,46,584	0/0:23,0:23:22.81:0,23,273	1/1:14,0:16:5.97:50,6,0	1/1:7,0:10:11.86:85,12,0	0/0:15,0:15:17.80:0,18,248	1/1:6,0:6:3.02:70,3,0	./.	0/0:8,0:8:2.04:0,2,6	./.	0/0:14,0:14:11.91:0,12,142	0/0:20,0:20:17.18:0,17,253	0/0:13,0:13:21.02:0,21,271	0/1:19,0:19:0:0,0,0	0/0:3,0:3:2.04:0,2,6	./.	./.
chr10	44838956	.	T	TACATAC	362.90	PASS	AB=0.887;AC=11;AF=0.229;AN=48;BaseQRankSum=5.109;DP=391;FS=5.167;HRun=0;HaplotypeScore=134.3107;InbreedingCoeff=0.3332;MQ=56.65;MQ0=16;MQRankSum=-3.971;QD=2.67;ReadPosRankSum=3.261;VQSLOD=1.8955;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:3,4:8:0.02:0,0,0	0/1:14,0:14:29.76:30,0,496	0/0:9,0:6:15.05:0,15,258	0/0:16,0:6:10.70:0,11,203	0/1:4,6:13:0.29:1,0,0	0/0:26,0:26:54.09:0,54,940	0/0:12,0:12:24.07:0,24,460	0/0:32,0:32:94.81:0,95,1846	0/0:14,0:14:30.09:0,30,571	0/0:22,0:19:48.29:0,48,965	0/1:26,0:24:0:1,0,0	0/0:20,0:20:24.08:0,24,551	0/1:22,0:22:99:149,0,517	0/1:22,0:22:52.01:52,0,237	0/0:16,0:12:5.15:0,5,96	0/0:12,0:10:4.32:0,4,101	0/0:15,0:15:5.81:0,6,295	0/0:7,0:7:17.76:0,18,267	./.	1/1:3,4:7:3.01:105,3,0	./.	0/0:16,0:16:14.69:0,15,210	0/0:20,0:20:19.11:0,19,409	0/0:14,0:14:18.01:0,18,423	0/1:20,0:19:0:1,0,0	1/1:1,3:4:6.02:143,6,0	./.	./.
chr10	44838991	.	ATG	A	41.30	PASS	AB=0.932;AC=9;AF=0.173;AN=52;BaseQRankSum=2.026;DP=444;FS=4.857;HRun=0;HaplotypeScore=153.5021;InbreedingCoeff=0.3863;MQ=60.36;MQ0=7;MQRankSum=-4.587;QD=0.36;ReadPosRankSum=-3.283;VQSLOD=1.3296;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/0:11,0:11:10.06:0,10,319	0/0:27,0:18:43.97:0,44,771	0/0:34,0:21:21.17:0,21,648	0/1:12,0:12:0:0,0,0	0/0:27,0:27:60.02:0,60,845	0/0:15,0:15:32.97:0,33,554	0/0:37,0:36:41.19:0,41,760	0/0:24,0:24:57.87:0,58,983	0/1:21,3:24:51.23:51,0,225	0/1:27,0:26:0.07:0,0,0	0/0:15,0:15:18.06:0,18,337	0/0:16,0:16:37.42:0,37,518	0/0:18,0:18:21.05:0,21,325	1/1:24,1:25:3.89:45,4,0	0/0:13,2:15:10.78:0,11,49	0/0:13,3:16:11.48:0,11,45	0/1:7,1:8:25.46:25,0,36	0/0:5,0:5:11.92:0,12,98	1/1:3,0:3:3.01:30,3,0	./.	0/0:19,0:19:30.10:0,30,569	0/0:17,0:17:24.05:0,24,429	0/0:15,0:15:26.97:0,27,487	0/1:13,2:15:0.03:0,0,0	0/0:6,0:6:8.87:0,9,114	0/0:3,0:3:3.01:0,3,38	0/0:2,0:2:2.98:0,3,21
chr10	44838994	.	TAGAG	T	1758.10	PASS	AB=0.810;AC=17;AF=0.327;AN=52;BaseQRankSum=7.155;DP=444;FS=2.000;HRun=0;HaplotypeScore=154.1690;InbreedingCoeff=0.6326;MQ=61.62;MQ0=8;MQRankSum=-8.416;QD=12.12;ReadPosRankSum=0.348;VQSLOD=2.8324;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:7,0:7:0:0,0,0	0/0:9,0:10:20.71:0,21,261	0/0:32,0:20:54:0,54,1120	0/0:36,0:23:1.36:0,1,680	0/1:12,0:12:0:0,0,1	0/0:29,0:29:66.21:0,66,1535	0/0:17,0:17:39.12:0,39,884	1/1:22,8:29:62.49:745,62,0	0/0:24,0:24:60.12:0,60,1397	1/1:9,14:23:55.68:795,56,0	0/1:9,18:26:0:0,0,0	0/0:15,0:15:18.06:0,18,465	0/0:17,0:17:42.01:0,42,785	0/0:19,0:19:27.09:0,27,569	0/0:7,16:23:0.78:0,1,4	1/1:5,9:14:12.04:188,12,0	0/0:7,0:14:13.99:0,14,65	0/1:6,2:8:12.05:61,0,12	0/0:5,0:5:2.03:0,2,5	./.	./.	0/0:18,0:18:30.10:0,30,774	0/0:20,0:20:33.11:0,33,828	0/0:15,0:15:27.09:0,27,697	0/1:7,8:15:0:0,0,0	1/1:4,0:4:5.87:51,6,0	1/1:3,0:3:5.87:36,6,0	1/1:2,0:2:3.01:36,3,0
chr10	44839003	.	AGAGT	A	1179.44	PASS	AB=0.905;AC=22;AF=0.423;AN=52;BaseQRankSum=9.080;DP=468;FS=4.603;HRun=0;HaplotypeScore=152.6547;InbreedingCoeff=0.6106;MQ=60.72;MQ0=11;MQRankSum=-8.763;QD=6.86;ReadPosRankSum=-1.461;VQSLOD=2.1197;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:5,2:7:0:0,0,0	0/1:11,0:11:12.37:12,0,92	0/0:47,0:28:72.43:0,72,1319	0/0:51,0:27:24.59:0,25,777	0/1:6,7:13:0.29:0,0,0	0/0:28,0:28:63.17:0,63,1543	0/0:16,0:16:38.98:0,39,902	0/1:28,0:27:9.38:319,0,9	0/0:26,0:26:69.11:0,69,1541	1/1:22,0:22:51.96:549,52,0	1/1:26,0:25:2.18:11,2,0	0/0:15,0:15:18.06:0,18,502	0/0:18,0:18:35.95:0,36,750	0/0:22,0:22:35.95:0,36,704	0/1:21,0:21:0.30:1,0,0	1/1:12,0:12:11.48:123,11,0	0/0:15,0:15:9:0,9,133	1/1:7,0:7:5.93:48,6,0	1/1:3,0:3:5.96:43,6,0	./.	./.	0/0:20,0:20:39.12:0,39,987	0/0:19,0:19:36.12:0,36,967	0/0:16,0:16:27.09:0,27,753	0/1:13,0:13:0:0,0,0	1/1:2,2:4:8.99:110,9,0	1/1:2,1:3:6.02:71,6,0	1/1:1,1:2:3.01:56,3,0
chr10	44839010	.	G	GTA	102.39	PASS	AB=0.955;AC=8;AF=0.167;AN=48;BaseQRankSum=4.759;DP=471;FS=8.447;HRun=0;HaplotypeScore=140.9761;InbreedingCoeff=0.6740;MQ=60.36;MQ0=21;MQRankSum=-1.919;QD=3.01;ReadPosRankSum=0.310;VQSLOD=2.1902;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:11,0:11:21.07:0,21,266	0/0:52,0:29:69.02:0,69,921	0/0:55,0:29:28.59:0,29,526	0/1:9,1:10:0.21:0,0,0	0/0:22,0:22:54.17:0,54,802	0/0:15,0:15:39.04:0,39,542	0/0:25,0:24:66.73:0,67,507	0/0:26,0:26:25.60:0,26,895	0/0:24,0:23:64.61:0,65,479	0/0:27,0:26:2.71:0,3,33	0/0:15,0:15:18.06:0,18,275	0/0:15,0:15:30.08:0,30,430	0/0:23,0:23:26.88:0,27,405	0/0:24,0:24:2.71:0,3,17	0/0:10,0:10:11.75:0,12,71	0/0:15,0:15:27.45:0,27,353	0/0:7,0:7:8.91:0,9,69	./.	./.	./.	0/0:21,0:21:42.02:0,42,616	0/0:20,0:19:39:0,39,571	0/0:17,0:17:33.02:0,33,460	0/1:13,0:13:0.09:0,0,0	1/1:3,1:4:9.03:116,9,0	1/1:4,1:5:6.01:61,6,0	1/1:1,1:2:3.01:37,3,0
chr10	44839012	.	GTGTA	G	1972.15	PASS	AB=0.873;AC=19;AF=0.380;AN=50;BaseQRankSum=9.878;DP=462;FS=1.205;HRun=0;HaplotypeScore=139.6229;InbreedingCoeff=0.6808;MQ=58.58;MQ0=21;MQRankSum=-7.806;QD=13.24;ReadPosRankSum=-1.945;VQSLOD=2.7927;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:7:0:0,0,0	0/0:10,0:10:20.09:0,20,119	0/0:51,0:28:42.93:0,43,1392	0/0:52,1:27:0.70:0,1,875	0/1:10,0:10:0.21:0,0,0	0/0:22,0:22:51.17:0,51,1343	0/0:14,0:14:35.99:0,36,909	1/1:14,10:23:50.58:635,51,0	0/0:27,0:27:69.20:0,69,1670	1/1:9,15:23:63.59:1057,64,0	1/1:7,19:25:5.43:79,5,0	0/0:14,0:14:18.06:0,18,485	0/0:15,0:15:36.07:0,36,791	0/0:23,0:23:27.09:0,27,656	1/1:8,16:24:3.35:13,3,0	1/1:3,7:10:12.51:194,13,0	0/0:15,0:15:33.09:0,33,548	1/1:3,4:7:6.35:102,6,0	./.	./.	./.	0/0:20,0:20:42.14:0,42,1112	0/0:21,0:20:45.11:0,45,1046	0/0:17,0:17:33.11:0,33,843	0/1:5,8:13:0:0,0,0	0/1:4,0:4:13.72:14,0,14	1/1:5,0:5:5.34:24,5,0	1/1:2,0:2:2.90:16,3,0
chr10	44839014	.	GTA	G	1094.99	PASS	AB=0.955;AC=12;AF=0.240;AN=50;BaseQRankSum=9.015;DP=458;FS=0.587;HRun=0;HaplotypeScore=120.9340;InbreedingCoeff=0.6477;MQ=59.25;MQ0=21;MQRankSum=-6.927;QD=9.12;ReadPosRankSum=-1.576;VQSLOD=3.1364;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:7:0:0,0,0	0/0:10,0:10:20.48:0,20,167	0/0:52,0:30:60.50:0,60,1016	0/0:54,0:27:13.76:0,14,583	0/0:10,0:10:0:0,0,1	0/0:23,0:23:54.15:0,54,973	0/0:15,0:15:36.99:0,37,635	0/1:18,2:19:36.10:325,0,36	0/0:27,0:27:69.14:0,69,1185	1/1:21,2:22:62.31:617,62,0	1/1:26,0:25:8.57:79,9,0	0/0:14,0:14:18.06:0,18,347	0/0:16,0:16:39.03:0,39,601	0/0:21,0:21:26.58:0,27,412	1/1:23,0:23:1.21:3,1,0	1/1:9,2:11:15.49:145,15,0	0/0:14,0:14:20.13:0,20,254	1/1:6,0:6:5.87:69,6,0	./.	./.	./.	0/0:21,0:21:45.14:0,45,798	0/0:21,0:20:45.06:0,45,719	0/0:17,0:17:33.08:0,33,589	0/1:11,0:11:0:0,0,0	0/0:4,0:4:6.60:0,7,30	0/0:5,0:5:4.11:0,4,19	0/0:2,0:2:0.89:0,1,2
chr10	44839018	.	GTGTC	G	866.40	PASS	AB=0.978;AC=15;AF=0.288;AN=52;BaseQRankSum=9.801;DP=476;FS=0.000;HRun=0;HaplotypeScore=127.9870;InbreedingCoeff=0.2595;MQ=55.50;MQ0=25;MQRankSum=-7.170;QD=5.52;ReadPosRankSum=1.958;VQSLOD=1.7695;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:0:0,0,0	1/1:9,0:9:18.03:188,18,0	0/0:57,0:30:83.07:0,83,1485	0/0:53,0:24:18.77:0,19,759	0/1:9,0:9:0:0,0,0	0/0:24,0:24:60.21:0,60,1507	0/0:16,0:16:44.96:0,45,1026	0/1:19,2:20:3.77:352,0,4	0/0:27,0:27:72.25:0,72,1914	0/1:25,1:25:81.98:331,0,82	0/1:26,0:25:3.38:3,0,34	0/0:14,0:14:21.07:0,21,548	0/0:19,0:19:47.90:0,48,1108	0/0:19,0:19:26.92:0,27,605	1/1:22,0:22:0.89:3,1,0	0/1:11,1:12:47.94:69,0,48	0/0:14,0:14:33.11:0,33,825	0/1:8,0:8:25.72:26,0,28	0/0:3,0:2:2.90:0,3,16	./.	./.	0/0:21,0:21:45.15:0,45,1244	0/0:21,0:20:45.15:0,45,1199	0/0:18,0:18:33.11:0,33,863	0/1:11,0:11:0:0,0,0	0/1:6,0:5:5.64:6,0,46	0/1:5,0:5:5.23:9,0,5	1/1:2,0:2:2.90:16,3,0
chr10	44839020	.	GTCTC	G	670.52	PASS	AB=1.000;AC=18;AF=0.346;AN=52;BaseQRankSum=7.634;DP=469;FS=10.138;HRun=0;HaplotypeScore=122.5207;InbreedingCoeff=0.2854;MQ=54.73;MQ0=27;MQRankSum=-4.373;QD=4.47;ReadPosRankSum=-0.066;VQSLOD=1.5705;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:0:0,0,0	1/1:3,6:9:18.06:334,18,0	0/0:57,0:29:55.64:0,56,1328	0/0:51,0:21:21.86:0,22,637	0/1:8,0:8:0:0,0,0	0/0:24,0:24:60.21:0,60,1459	0/1:17,0:17:3.29:3,0,919	0/1:24,0:23:45.25:209,0,45	0/0:27,0:27:72.25:0,72,1921	0/1:26,0:25:99:137,0,239	0/0:24,0:23:9.24:0,9,102	0/0:14,0:14:21.07:0,21,551	0/0:19,0:19:48.16:0,48,1187	0/0:17,0:18:26.92:0,27,584	1/1:21,0:21:0.89:2,1,0	0/1:12,0:12:11.99:12,0,96	0/0:15,0:15:39.08:0,39,935	0/1:8,0:8:16.38:16,0,93	1/1:3,0:2:1.55:4,2,0	./.	./.	0/0:20,0:20:45.15:0,45,1214	0/0:20,0:19:45.15:0,45,1179	0/0:18,0:18:33.11:0,33,745	0/1:10,0:10:0:0,0,0	0/1:5,0:4:12.89:28,0,13	1/1:5,0:5:2.62:32,3,0	1/1:2,0:2:3.01:35,3,0
chr10	44839380	.	AT	A	3989.77	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=13.601;DP=599;FS=7.438;HRun=1;HaplotypeScore=116.2335;InbreedingCoeff=0.9873;MQ=74.08;MQ0=0;MQRankSum=-12.032;QD=33.81;ReadPosRankSum=2.203;VQSLOD=2.8842;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,27:26:57.19:795,57,0	0/0:14,0:14:39.12:0,39,599	0/0:30,0:30:90.29:0,90,1393	0/0:25,0:25:72.23:0,72,1100	1/1:0,15:15:33.07:437,33,0	0/0:16,0:16:48.16:0,48,754	0/0:29,0:29:87.27:0,87,1331	0/0:34,0:34:96.29:0,96,1450	0/0:25,0:25:75.24:0,75,1172	0/0:31,0:31:93.31:0,93,1453	0/0:19,0:19:51.17:0,51,813	0/0:33,0:33:96.31:0,96,1509	0/0:28,0:28:84.27:0,84,1314	0/0:20,0:20:60.20:0,60,953	0/0:30,0:30:90.31:0,90,1438	0/0:28,0:28:81.26:0,81,1261	0/0:30,0:30:90.28:0,90,1389	0/0:27,0:27:78.27:0,78,1237	1/1:0,19:19:54.18:754,54,0	1/1:0,5:5:9.03:126,9,0	1/1:0,12:12:30.10:419,30,0	0/0:18,0:18:54.17:0,54,838	0/0:12,0:12:36.12:0,36,575	0/0:21,0:21:63.19:0,63,981	0/0:11,0:11:33.10:0,33,500	1/1:0,17:17:48.16:666,48,0	1/1:0,17:17:45.15:627,45,0	1/1:0,6:6:14.96:166,15,0
chr10	44839427	.	ACACAGCC	A	4298.52	PASS	AC=14;AF=0.259;AN=54;BaseQRankSum=10.462;DP=473;FS=5.058;HRun=0;HaplotypeScore=155.3849;InbreedingCoeff=0.9791;MQ=63.45;MQ0=1;MQRankSum=-10.786;QD=47.76;ReadPosRankSum=0.231;VQSLOD=4.2889;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,15:17:33.11:835,33,0	0/0:11,0:11:27.08:0,27,869	0/0:19,0:16:38.34:0,38,1286	0/0:15,0:12:30.06:0,30,787	1/1:6,7:13:18.06:458,18,0	0/0:15,0:15:45.15:0,45,1682	0/0:25,0:25:72.25:0,72,2774	0/0:29,0:29:75.26:0,75,2784	0/0:23,0:23:66.23:0,66,2590	0/0:17,0:17:45.15:0,45,1642	0/0:14,0:14:33.11:0,33,1298	0/0:20,0:20:54.19:0,54,1979	0/0:24,0:24:66.23:0,66,2387	0/0:21,0:21:51.18:0,51,1856	0/0:16,0:16:45.15:0,45,1685	0/0:26,0:26:74.06:0,74,2809	0/0:32,0:32:81.28:0,81,3064	0/0:20,0:20:54.19:0,54,2037	1/1:4,9:13:24.08:615,24,0	./.	1/1:1,5:6:12:242,12,0	0/0:15,0:15:42.14:0,42,1635	0/0:9,0:9:24.08:0,24,948	0/0:24,0:24:66.70:0,67,2473	0/0:6,0:6:18.06:0,18,711	1/1:5,9:14:27.09:692,27,0	1/1:5,18:23:48.16:1225,48,0	1/1:0,3:3:9.03:231,9,0
chr10	44839443	.	AAGCAGCAGCAGC	A	942.78	PASS	AC=12;AF=0.500;AN=24;BaseQRankSum=2.298;DP=449;FS=0.000;HRun=0;HaplotypeScore=191.7678;InbreedingCoeff=0.6666;MQ=59.74;MQ0=9;MQRankSum=-3.298;QD=7.31;ReadPosRankSum=2.343;VQSLOD=2.2358;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:21:5.67:0,6,27	./.	./.	./.	./.	./.	0/0:33,0:32:33.11:0,33,1490	./.	0/0:22,0:22:30.08:0,30,1490	./.	./.	1/1:14,5:19:6.02:159,6,0	1/1:17,6:23:6.02:203,6,0	1/1:13,11:24:15.02:426,15,0	./.	1/1:23,0:23:3.01:84,3,0	0/0:26,0:31:21.07:0,21,344	1/1:17,0:17:3.01:84,3,0	./.	./.	0/0:11,0:11:0.89:0,1,2	./.	./.	1/1:20,2:23:3.01:101,3,0	./.	./.	0/0:21,0:20:21.07:0,21,544	./.
chr10	44839500	.	C	CAAT	813.53	PASS	AB=1.000;AC=19;AF=0.365;AN=52;BaseQRankSum=9.033;DP=341;FS=8.300;HRun=0;HaplotypeScore=91.8741;InbreedingCoeff=0.4690;MQ=56.49;MQ0=12;MQRankSum=-4.656;QD=7.20;ReadPosRankSum=-1.821;VQSLOD=1.4122;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,0:9:2.33:34,2,0	0/1:7,0:7:16.72:17,0,17	0/0:12,0:11:23.83:0,24,419	0/0:14,0:12:29.64:0,30,526	0/0:6,0:6:1.82:0,2,5	0/0:14,0:10:27.09:0,27,421	0/0:27,0:27:78.27:0,78,1260	0/1:14,0:14:1.07:3,0,1	0/0:22,0:22:63.20:0,63,1031	0/1:9,0:9:1.54:4,0,2	./.	0/0:18,0:18:45.14:0,45,667	0/0:19,0:19:42.13:0,42,620	0/0:17,0:17:30.05:0,30,376	1/1:6,0:5:0.47:1,0,0	0/1:15,0:15:1.42:1,0,10	0/0:31,0:31:66.15:0,66,894	0/0:12,0:12:2.60:0,3,15	1/1:5,0:5:6.49:84,6,0	1/1:3,0:3:2.59:33,3,0	1/1:11,0:10:7.15:77,7,0	0/0:4,0:2:6.02:0,6,94	0/0:8,0:5:7.38:0,7,99	0/0:20,0:20:45.13:0,45,664	1/1:11,0:11:2.21:29,2,0	0/1:5,0:4:29.92:30,0,36	1/1:11,6:16:42.14:652,42,0	./.
chr10	44839508	.	GCAA	G	366.52	PASS	AB=1.000;AC=11;AF=0.204;AN=54;BaseQRankSum=6.209;DP=390;FS=15.859;HRun=0;HaplotypeScore=102.5846;InbreedingCoeff=0.7839;MQ=64.68;MQ0=5;MQRankSum=-6.718;QD=5.47;ReadPosRankSum=-1.793;VQSLOD=0.9019;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:12:2.49:16,2,0	0/0:7,0:7:20.96:0,21,179	0/0:18,0:17:45.02:0,45,426	0/0:20,0:18:44.65:0,45,476	0/0:1,9:10:0.47:0,0,1	0/0:14,0:11:30.01:0,30,267	0/0:21,0:21:60.09:0,60,723	0/0:23,0:23:62.79:0,63,529	0/0:24,0:24:69.09:0,69,993	0/0:10,0:10:23.99:0,24,219	0/0:7,0:7:20.98:0,21,185	0/0:19,0:19:43.69:0,44,388	0/0:19,0:19:37.73:0,38,347	0/0:18,0:18:19.17:0,19,180	0/0:7,0:7:20.91:0,21,169	0/0:17,0:17:47.61:0,48,375	0/0:30,0:30:77.13:0,77,625	0/0:13,0:13:30.78:0,31,242	1/1:9,0:9:9.17:134,9,0	1/1:6,0:6:2.54:19,3,0	0/1:13,0:13:0.21:42,0,0	0/0:2,0:2:6:0,6,54	0/0:6,0:6:13.36:0,13,111	0/0:22,0:22:52.76:0,53,468	0/0:15,0:15:35.95:0,36,310	1/1:8,0:7:13.51:119,14,0	1/1:18,0:17:23.91:188,24,0	./.
chr10	44839701	.	G	GA	5367.71	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-12.339;DP=559;FS=1.129;HRun=7;HaplotypeScore=96.3296;InbreedingCoeff=0.9995;MQ=83.46;MQ0=0;MQRankSum=0.723;QD=30.33;ReadPosRankSum=2.078;VQSLOD=4.4804;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:42.06:0,42,406	1/1:2,0:20:49.06:259,49,0	0/0:14,0:14:30.04:0,30,285	0/0:27,0:26:38.95:0,39,547	0/0:32,0:32:72.11:0,72,695	0/0:24,0:24:72.12:0,72,695	0/0:16,0:16:48.08:0,48,464	1/1:7,27:34:87.27:1051,87,0	0/0:22,0:22:57.09:0,57,551	1/1:4,21:25:63.19:761,63,0	1/1:0,15:15:42.13:507,42,0	0/0:16,0:16:39.06:0,39,377	0/0:19,0:19:48.05:0,48,456	0/0:17,0:17:45.05:0,45,428	1/1:2,21:23:63.19:761,63,0	1/1:1,25:26:75.23:906,75,0	0/0:20,0:20:54.09:0,54,522	1/1:1,12:13:36.11:435,36,0	0/0:20,0:20:45.03:0,45,423	0/0:29,0:29:72.10:0,72,689	0/0:12,0:12:27.02:0,27,255	0/0:13,0:13:33.05:0,33,319	0/0:10,0:10:27.04:0,27,260	0/0:17,0:17:45.07:0,45,435	1/1:0,21:21:57.17:689,57,0	0/0:22,0:22:54.08:0,54,521	0/0:21,0:21:57.09:0,57,550	0/0:15,0:15:42.07:0,42,406
chr10	44839720	.	A	AT	6300.19	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=2.596;DP=563;FS=7.499;HRun=5;HaplotypeScore=96.3897;InbreedingCoeff=0.9986;MQ=79.36;MQ0=0;MQRankSum=-6.576;QD=32.14;ReadPosRankSum=0.904;VQSLOD=4.8307;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,20:24:51.16:655,51,0	0/0:14,0:14:39.10:0,39,419	0/0:14,0:14:18.13:0,18,274	0/0:22,0:21:45.06:0,45,459	1/1:3,24:27:69.11:861,69,0	0/0:22,0:22:63.16:0,63,677	0/0:19,0:19:54.12:0,54,572	1/1:7,23:30:72.16:863,72,0	0/0:20,0:20:51.13:0,51,548	0/0:21,0:21:60.14:0,60,639	0/0:23,0:23:64.03:0,64,667	0/0:17,0:17:51.10:0,51,532	0/0:22,0:22:57.10:0,57,587	0/0:15,0:15:42.07:0,42,434	0/0:24,0:24:72.18:0,72,772	0/0:28,0:28:78.19:0,78,837	0/0:20,0:20:54.11:0,54,569	0/0:16,0:16:42.11:0,42,451	1/1:1,16:17:42.10:534,42,0	1/1:1,25:26:72.23:947,72,0	1/1:1,12:13:33.11:434,33,0	0/0:17,0:17:51.10:0,51,535	0/0:11,0:11:30.08:0,30,322	0/0:21,0:21:57.14:0,57,612	0/0:21,0:21:54.13:0,54,575	1/1:1,20:21:54.18:706,54,0	1/1:1,22:23:63.20:827,63,0	1/1:3,12:15:36.12:474,36,0
chr10	44839817	.	AG	A	3875.25	PASS	AB=1.000;AC=30;AF=0.536;AN=56;BaseQRankSum=18.971;DP=573;FS=1.814;HRun=2;HaplotypeScore=126.4616;InbreedingCoeff=0.8488;MQ=84.60;MQ0=0;MQRankSum=-5.424;QD=13.14;ReadPosRankSum=1.323;VQSLOD=2.9197;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,12:16:27.07:297,27,0	1/1:16,0:16:40.28:175,40,0	0/0:19,0:19:54.18:0,54,802	0/0:21,0:21:63.21:0,63,912	1/1:2,13:15:21.04:224,21,0	0/0:21,0:21:63.21:0,63,937	0/0:23,0:23:69.22:0,69,1014	0/1:39,0:39:67.66:244,0,68	0/0:30,0:30:90.29:0,90,1329	1/1:27,0:27:41.91:263,42,0	0/1:22,0:22:0.67:185,0,1	0/0:22,0:22:63.18:0,63,886	0/0:31,0:31:93.28:0,93,1347	0/0:24,0:24:72.20:0,72,1019	1/1:28,0:28:64.87:260,65,0	1/1:27,0:27:26.23:202,26,0	0/0:29,0:29:87.27:0,87,1265	1/1:15,0:15:40.37:194,40,0	1/1:3,4:6:9.03:103,9,0	1/1:1,14:15:39.11:439,39,0	1/1:3,6:9:9.02:100,9,0	0/0:18,0:18:51.16:0,51,725	0/0:16,0:16:48.13:0,48,674	0/0:24,0:24:72.22:0,72,1038	1/1:19,0:19:47.84:211,48,0	1/1:16,0:16:32.04:324,32,0	1/1:3,20:23:57.10:621,57,0	1/1:0,1:1:3.01:33,3,0
chr10	44839819	.	GT	G	8376.63	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=17.515;DP=573;FS=1.419;HRun=4;HaplotypeScore=110.7712;InbreedingCoeff=0.9589;MQ=86.49;MQ0=0;MQRankSum=-7.067;QD=28.49;ReadPosRankSum=0.219;VQSLOD=3.7532;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:16:27.07:297,27,0	1/1:0,16:16:45.14:540,45,0	0/0:22,0:22:63.16:0,63,801	0/0:21,0:21:63.17:0,63,796	1/1:15,0:15:21.04:224,21,0	0/0:21,0:21:63.21:0,63,882	0/0:23,0:23:69.23:0,69,966	1/1:5,32:37:96.26:1127,96,0	0/0:31,0:31:90.29:0,90,1235	1/1:1,27:28:78.24:933,78,0	1/1:2,20:22:54.16:647,54,0	0/0:21,0:21:60.19:0,60,824	0/0:31,0:31:90.29:0,90,1244	0/0:23,0:23:66.21:0,66,909	1/1:0,28:28:75.23:900,75,0	1/1:2,25:27:72.22:864,72,0	0/0:29,0:29:81.27:0,81,1134	1/1:0,15:15:45.10:523,45,0	1/1:7,0:6:9.03:103,9,0	1/1:15,0:15:39.11:439,39,0	1/1:9,0:9:9.02:100,9,0	0/0:16,0:16:48.15:0,48,656	0/0:16,0:16:45.15:0,45,629	0/0:25,0:25:69.22:0,69,949	1/1:0,19:19:54.17:647,54,0	1/1:1,15:16:33.09:377,33,0	1/1:23,0:23:57.10:621,57,0	1/1:1,0:1:3.01:33,3,0
chr10	44839906	.	A	ATCCCTAGTCCTACATGGAT	18180.57	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=1.815;DP=574;FS=6.145;HRun=0;HaplotypeScore=317.5312;InbreedingCoeff=0.9602;MQ=79.91;MQ0=0;MQRankSum=-13.086;QD=134.67;ReadPosRankSum=0.534;VQSLOD=3.9383;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,5:19:39.13:2583,39,0	0/0:13,0:13:36.10:0,36,1634	0/0:29,0:29:84.23:0,84,3339	0/0:16,0:16:45.09:0,45,1536	1/1:25,4:29:41.77:2765,42,0	0/0:16,0:16:45.14:0,45,2036	0/0:22,0:22:63.18:0,63,3050	0/0:25,0:25:69.23:0,69,3071	0/0:22,0:22:60.21:0,60,2624	0/0:32,0:32:96.29:0,96,4608	0/0:18,0:18:54.17:0,54,2256	0/0:20,0:20:57.20:0,57,2977	0/0:25,0:25:72.23:0,72,3352	0/0:29,0:29:84.29:0,84,4392	0/0:30,0:30:87.30:0,87,4278	0/0:20,0:20:57.20:0,57,2913	0/0:29,0:29:81.26:0,81,3875	0/0:14,0:14:42.14:0,42,2153	1/1:8,2:7:15.02:1021,15,0	1/1:15,1:16:17.92:621,18,0	1/1:5,0:5:6.02:270,6,0	0/0:23,0:23:66.20:0,66,2716	0/0:15,0:15:45.15:0,45,2468	0/0:18,0:18:51.15:0,51,2546	0/0:23,0:23:69.24:0,69,3395	1/1:16,8:24:54.18:3927,54,0	1/1:23,6:29:87.30:6601,87,0	1/1:3,0:3:6.02:392,6,0
chr10	44839982	.	A	AT	7080.83	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=15.647;DP=647;FS=0.683;HRun=1;HaplotypeScore=99.9166;InbreedingCoeff=0.9986;MQ=74.55;MQ0=0;MQRankSum=-8.423;QD=40.00;ReadPosRankSum=2.103;VQSLOD=5.0218;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,20:23:63.21:936,63,0	0/0:12,0:12:33.11:0,33,428	0/0:20,0:20:51.14:0,51,628	0/0:22,0:22:58.70:0,59,738	1/1:1,28:29:75.21:1091,75,0	0/0:19,0:19:57.17:0,57,725	0/0:21,0:21:60.19:0,60,778	0/0:29,0:29:78.23:0,78,976	0/0:27,0:27:81.25:0,81,1037	0/0:28,0:28:84.23:0,84,1061	0/0:19,0:19:57.17:0,57,725	0/0:21,0:21:63.19:0,63,804	0/0:22,0:22:66.21:0,66,855	0/0:26,0:26:78.23:0,78,986	0/0:40,0:40:99:0,120,1532	0/0:34,0:34:99:0,102,1311	0/0:25,0:25:75.22:0,75,955	0/0:15,0:15:45.15:0,45,584	1/1:2,7:8:18.06:266,18,0	1/1:1,31:32:87.23:1275,87,0	1/1:1,19:20:57.19:854,57,0	0/0:28,0:28:81.24:0,81,1026	0/0:17,0:16:48.16:0,48,623	0/0:18,0:18:51.17:0,51,661	0/0:27,0:27:81.26:0,81,1052	1/1:1,17:18:48.16:719,48,0	1/1:4,31:35:99:1448,99,0	1/1:0,11:11:33.11:492,33,0
chr10	44840132	.	GTT	G	5162.08	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=12.306;DP=771;FS=4.061;HRun=2;HaplotypeScore=162.7861;InbreedingCoeff=0.9929;MQ=68.44;MQ0=3;MQRankSum=-2.790;QD=25.68;ReadPosRankSum=5.291;VQSLOD=4.2290;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:10,29:39:76.38:978,76,0	0/0:7,0:7:21.07:0,21,408	0/0:27,0:26:71.40:0,71,1313	0/0:34,0:32:72.42:0,72,1401	1/1:5,11:16:24.08:304,24,0	0/0:17,0:17:51.17:0,51,981	0/0:32,0:32:96.33:0,96,1896	0/0:29,0:29:87.26:0,87,1253	0/0:30,0:30:90.31:0,90,1764	0/0:37,0:37:99:0,109,1409	0/0:38,0:38:99:0,105,1352	0/0:27,0:27:81.28:0,81,1636	0/0:26,0:26:78.27:0,78,1546	0/0:33,0:33:99:0,99,1985	0/0:44,0:43:99:0,126,1618	0/0:26,0:26:72.21:0,72,877	0/0:33,0:33:99:0,99,1965	0/0:24,0:23:66.21:0,66,892	1/1:4,9:13:24.63:312,25,0	1/1:0,28:28:62.06:795,62,0	1/1:5,43:48:93.29:1181,93,0	0/0:28,0:28:81.27:0,81,1549	0/0:26,0:26:78.26:0,78,1532	0/0:26,0:26:78.27:0,78,1575	0/0:26,0:26:75.22:0,75,924	1/1:0,23:23:62.28:725,62,0	1/1:0,27:27:57.18:714,57,0	1/1:3,4:7:11.51:154,12,0
chr10	44840134	.	T	TCA	8759.62	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-7.991;DP=770;FS=7.465;HRun=0;HaplotypeScore=151.2082;InbreedingCoeff=0.9913;MQ=67.94;MQ0=3;MQRankSum=0.220;QD=38.42;ReadPosRankSum=-1.829;VQSLOD=5.6158;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:71.02:0,71,349	0/0:8,0:8:18.06:0,18,227	0/0:24,0:25:59.87:0,60,689	0/0:33,0:31:42.69:0,43,627	0/0:14,0:15:22.73:0,23,112	0/0:17,0:17:39.12:0,39,492	0/0:33,0:33:78.23:0,78,970	1/1:11,19:30:57.18:922,57,0	0/0:29,0:29:75.22:0,75,932	1/1:4,32:36:93.28:1491,93,0	1/1:8,30:40:78.22:1261,78,0	0/0:27,0:27:75.23:0,75,933	0/0:26,0:26:72.23:0,72,909	0/0:31,0:31:93.28:0,93,1160	1/1:4,40:45:99:1845,111,0	1/1:0,25:25:69.24:1147,69,0	0/0:34,0:34:90.25:0,90,1106	1/1:5,19:23:54.18:897,54,0	0/0:12,0:12:25.57:0,26,126	0/0:28,0:28:59.66:0,60,293	0/0:47,0:47:87.80:0,88,433	0/0:28,0:28:69.16:0,69,828	0/0:26,0:26:69.14:0,69,825	0/0:27,0:27:75.24:0,75,947	1/1:1,26:27:72.25:1197,72,0	0/0:23,0:23:51.09:0,51,251	0/0:27,0:27:53.97:0,54,266	0/0:7,0:7:11.36:0,11,56
chr10	44840298	.	GC	G	7025.28	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=19.546;DP=763;FS=1.346;HRun=2;HaplotypeScore=116.2285;InbreedingCoeff=1.0000;MQ=63.19;MQ0=1;MQRankSum=-0.653;QD=34.27;ReadPosRankSum=3.050;VQSLOD=4.6158;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,39:39:99:1299,102,0	0/0:13,0:13:39.11:0,39,546	0/0:26,0:24:71.87:0,72,921	0/0:25,0:25:66.65:0,67,866	1/1:1,30:31:81.17:1012,81,0	0/0:28,0:28:81.22:0,81,1131	0/0:24,0:24:72.24:0,72,1079	0/0:35,0:35:99:0,105,1521	0/0:36,0:36:99:0,108,1558	0/0:27,0:27:81.26:0,81,1195	0/0:18,0:18:54.18:0,54,804	0/0:26,0:26:78.26:0,78,1168	0/0:28,0:28:84.27:0,84,1236	0/0:33,0:33:99:0,99,1445	0/0:35,0:35:99:0,105,1524	0/0:29,0:29:84.27:0,84,1239	0/0:30,0:30:87.25:0,87,1258	0/0:14,0:14:42.09:0,42,603	1/1:1,14:15:39.13:505,39,0	1/1:0,24:24:63.16:798,63,0	1/1:0,33:33:90.29:1168,90,0	0/0:31,0:31:90.29:0,90,1328	0/0:26,0:25:69.19:0,69,972	0/0:39,0:38:99:0,117,1727	0/0:35,0:35:99:0,102,1486	1/1:0,23:23:69.21:882,69,0	1/1:0,26:26:63.20:816,63,0	1/1:0,14:14:42.14:545,42,0
chr10	44840495	.	T	TA	5264.58	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=17.535;DP=651;FS=10.325;HRun=4;HaplotypeScore=126.0607;InbreedingCoeff=0.9996;MQ=75.93;MQ0=0;MQRankSum=-11.466;QD=29.91;ReadPosRankSum=2.339;VQSLOD=3.3280;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,14:17:30.10:391,30,0	0/0:12,0:12:36.10:0,36,408	0/0:20,0:20:57.15:0,57,636	0/0:15,0:15:36:0,36,378	1/1:9,25:34:67.53:837,68,0	0/0:22,0:22:66.19:0,66,748	0/0:24,0:24:66.17:0,66,738	0/0:32,0:32:81.23:0,81,919	0/0:25,0:25:72.21:0,72,817	0/0:23,0:23:60.16:0,60,674	0/0:25,0:25:69.19:0,69,782	0/0:25,0:25:72.18:0,72,796	0/0:27,0:27:78.22:0,78,884	0/0:19,0:19:54.14:0,54,602	0/0:29,0:29:75.21:0,75,851	0/0:22,0:22:60.17:0,60,680	0/0:30,0:30:81.20:0,81,906	0/0:22,0:22:56.96:0,57,645	1/1:4,14:17:42.12:532,42,0	1/1:3,30:32:90.76:1162,91,0	1/1:5,13:18:27.05:331,27,0	0/0:27,0:27:81.23:0,81,919	0/0:32,0:32:90.26:0,90,1019	0/0:17,0:17:48.14:0,48,544	0/0:27,0:27:78.22:0,78,884	1/1:2,19:21:59:745,59,0	1/1:2,22:24:69.22:878,69,0	1/1:0,11:11:30.10:388,30,0
chr10	44841264	.	AGACCTGCAAATGCT	A	12299.40	PASS	AB=0.561;AC=15;AF=0.268;AN=56;BaseQRankSum=13.567;DP=605;FS=2.941;HRun=0;HaplotypeScore=266.0460;InbreedingCoeff=0.8880;MQ=65.48;MQ0=0;MQRankSum=-14.230;QD=78.34;ReadPosRankSum=1.209;VQSLOD=4.3669;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,15:18:27.09:1089,27,0	0/0:10,0:10:30.10:0,30,2067	0/0:26,0:24:66.22:0,66,2904	0/0:17,0:17:42.61:0,43,1871	1/1:1,22:23:51.18:2140,51,0	0/0:27,0:27:78.27:0,78,4921	0/0:17,0:17:45.15:0,45,3164	0/0:27,0:27:75.26:0,75,4272	0/0:24,0:24:72.23:0,72,4387	0/0:35,0:35:99:0,99,6039	0/0:26,0:26:75.26:0,75,5024	0/0:26,0:26:78.27:0,78,5358	0/0:24,0:24:66.23:0,66,3203	0/0:29,0:29:84.29:0,84,5594	0/0:28,0:28:81.28:0,81,5335	0/0:17,0:17:51.17:0,51,3341	0/0:11,0:11:30.10:0,30,1692	0/0:8,0:8:21.05:0,21,1193	1/1:2,3:5:6.02:166,6,0	1/1:3,32:35:87.30:3591,87,0	1/1:4,11:15:24.08:918,24,0	0/0:30,0:30:90.31:0,90,5925	0/0:25,0:25:75.24:0,75,4854	0/0:19,0:19:57.20:0,57,3974	0/0:22,0:22:66.23:0,66,4372	0/1:5,18:23:99:1233,0,568	1/1:5,25:30:51.17:2149,51,0	1/1:0,8:8:24.08:1014,24,0
chr10	44841873	.	G	GT	2278.01	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=7.453;DP=359;FS=7.278;HRun=5;HaplotypeScore=81.5000;InbreedingCoeff=0.9738;MQ=81.93;MQ0=0;MQRankSum=-8.256;QD=23.98;ReadPosRankSum=-1.864;VQSLOD=1.9004;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:27.07:0,27,290	0/0:4,0:4:12.03:0,12,127	0/0:18,0:17:48.57:0,49,501	0/0:10,0:10:30.07:0,30,314	0/0:16,0:16:42.11:0,42,451	0/0:17,0:17:42.07:0,42,434	0/0:20,0:20:54.14:0,54,580	1/1:3,0:23:51.64:259,52,0	0/0:13,0:13:33.08:0,33,355	1/1:1,11:12:30.10:387,30,0	1/1:1,15:16:42.14:538,42,0	0/0:19,0:19:57.14:0,57,612	0/0:8,0:8:24.06:0,24,258	0/0:11,0:11:27.07:0,27,290	1/1:1,14:15:33.04:408,33,0	1/1:1,5:6:18:214,18,0	0/0:21,0:21:63.16:0,63,676	1/1:0,11:11:27.09:351,27,0	0/0:22,0:22:48.12:0,48,516	0/0:9,0:9:24.03:0,24,248	0/0:5,0:5:12.03:0,12,129	0/0:10,0:10:24.06:0,24,258	0/0:7,0:7:21.05:0,21,225	0/0:10,0:10:30.08:0,30,322	1/1:3,9:11:27.01:318,27,0	0/0:11,0:11:30.07:0,30,321	0/0:16,0:16:42.10:0,42,451	0/0:3,0:3:8.98:0,9,83
chr10	44842163	.	ATC	A	1205.99	PASS	AC=28;AF=0.538;AN=52;BaseQRankSum=7.943;DP=164;FS=13.232;HRun=0;HaplotypeScore=36.7074;InbreedingCoeff=0.7530;MQ=51.95;MQ0=0;MQRankSum=-7.320;QD=21.16;ReadPosRankSum=1.249;VQSLOD=2.5808;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,4:4:5.05:54,5,0	1/1:0,3:3:6.02:96,6,0	0/0:7,0:7:21.03:0,21,333	0/0:7,0:4:12.04:0,12,219	1/1:0,4:4:3.01:46,3,0	0/0:5,0:5:15.05:0,15,299	0/0:15,0:15:42.12:0,42,727	1/1:0,5:3:8.93:64,9,0	0/0:12,0:12:36.12:0,36,650	1/1:1,3:2:6.02:97,6,0	1/1:1,0:1:3.01:45,3,0	0/0:7,0:7:18.06:0,18,341	0/0:10,0:10:27.01:0,27,460	0/0:7,0:7:21.07:0,21,372	1/1:0,2:2:6.02:96,6,0	1/1:1,7:8:23.97:352,24,0	0/0:16,0:16:45.07:0,45,802	./.	1/1:2,4:2:6.02:96,6,0	1/1:0,4:4:9.03:143,9,0	1/1:1,1:2:2.90:16,3,0	0/0:8,0:8:20.36:0,20,408	0/0:3,0:3:9.03:0,9,182	0/0:10,0:9:27.08:0,27,502	1/1:0,1:1:3.01:48,3,0	1/1:1,5:5:15.03:195,15,0	1/1:2,1:1:3.01:48,3,0	./.
chr10	44842187	.	CG	C	569.84	PASS	AB=0.600;AC=15;AF=0.375;AN=40;BaseQRankSum=6.451;DP=149;FS=7.010;HRun=1;HaplotypeScore=26.8579;InbreedingCoeff=0.6948;MQ=67.15;MQ0=1;MQRankSum=-6.598;QD=18.38;ReadPosRankSum=0.257;VQSLOD=3.3222;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:15,0:10:30.10:0,30,448	0/0:8,0:8:23.97:0,24,320	./.	0/0:10,0:10:17.88:0,18,218	0/0:13,0:13:39.13:0,39,583	./.	0/0:7,0:7:18.04:0,18,247	1/1:0,9:7:12.03:152,12,0	1/1:0,2:2:6.02:83,6,0	0/0:4,0:4:9.03:0,9,130	0/0:9,0:9:27.09:0,27,411	0/0:8,0:8:15.04:0,15,228	1/1:2,1:2:3.01:42,3,0	0/1:2,4:6:30.66:152,0,31	0/0:12,0:12:30.09:0,30,438	./.	1/1:0,3:2:6.02:83,6,0	./.	./.	0/0:8,0:8:24.06:0,24,342	0/0:6,0:5:14.88:0,15,194	0/0:8,0:8:21.07:0,21,321	1/1:0,1:1:3.01:42,3,0	1/1:1,2:2:6.02:83,6,0	1/1:0,4:4:6.02:83,6,0	./.
chr10	44842675	.	C	CT	758.73	PASS	AB=0.581;AC=13;AF=0.283;AN=46;BaseQRankSum=0.348;DP=541;FS=7.887;HRun=4;HaplotypeScore=27.1455;InbreedingCoeff=0.6754;MQ=27.84;MQ0=102;MQRankSum=-4.855;QD=9.85;ReadPosRankSum=-1.640;VQSLOD=-0.3998;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:16:2.58:0,3,216	./.	./.	./.	./.	0/0:28,0:21:18.02:0,18,190	0/0:33,0:17:45.13:0,45,507	1/1:3,6:4:9:104,9,0	0/0:21,0:16:12.02:0,12,125	1/1:0,9:8:23.67:296,24,0	1/1:2,2:1:3.01:41,3,0	0/0:27,0:22:23.98:0,24,254	0/0:29,0:23:27.07:0,27,297	0/0:36,0:30:51.06:0,51,542	1/1:4,13:13:15.05:204,15,0	0/1:5,13:17:15.91:186,0,16	0/0:41,0:20:15.04:0,15,168	1/1:10,5:3:3.01:41,3,0	0/0:16,0:5:15.04:0,15,170	0/0:12,0:8:11.99:0,12,121	0/0:42,0:9:12.03:0,12,135	0/0:29,0:17:15.04:0,15,170	0/0:31,0:15:6.02:0,6,68	0/0:17,0:14:17.97:0,18,186	1/1:0,5:3:3.01:41,3,0	0/0:22,0:13:39.11:0,39,441	0/0:27,0:18:21.06:0,21,235	./.
chr10	44842951	.	AGAGCATCT	A	2594.73	PASS	AC=16;AF=0.308;AN=52;BaseQRankSum=2.052;DP=412;FS=6.547;HRun=0;HaplotypeScore=82.6641;InbreedingCoeff=0.8016;MQ=32.13;MQ0=48;MQRankSum=-2.950;QD=34.14;ReadPosRankSum=-0.805;VQSLOD=2.3361;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:3:6.02:0,6,198	1/1:1,4:5:6.02:176,6,0	./.	./.	0/0:21,0:21:39.13:0,39,1469	0/0:25,0:24:12.04:0,12,542	0/0:21,0:8:15.05:0,15,677	1/1:12,8:9:6.02:176,6,0	0/0:18,0:15:15.05:0,15,675	1/1:4,8:10:21.07:599,21,0	1/1:3,13:15:18.06:507,18,0	0/0:16,0:14:12.04:0,12,534	0/0:18,0:15:9.03:0,9,406	0/0:18,0:17:8.84:0,9,296	1/1:0,8:8:18.06:527,18,0	1/1:0,5:4:9.03:263,9,0	0/0:31,0:25:18.06:0,18,789	1/1:0,2:2:3.01:88,3,0	0/0:8,0:3:9.03:0,9,310	0/0:10,0:10:27.09:0,27,1025	0/0:2,0:2:6.02:0,6,226	0/0:34,0:25:30.09:0,30,1244	0/0:27,0:18:14.90:0,15,565	0/0:14,0:12:3.01:0,3,135	1/1:0,8:8:15.05:439,15,0	0/0:16,1:14:39.13:0,39,1474	0/0:30,0:28:81.28:0,81,3049	0/0:7,0:6:18.06:0,18,673
chr10	44843482	.	GT	G	36.48	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=1.552;DP=545;FS=0.000;HRun=7;HaplotypeScore=77.5507;InbreedingCoeff=0.9610;MQ=78.07;MQ0=0;MQRankSum=-1.218;QD=9.12;ReadPosRankSum=-0.164;VQSLOD=1.1789;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:54.16:0,54,665	1/1:0,4:4:12.03:122,12,0	0/0:15,0:15:33.10:0,33,396	0/0:27,0:27:68.91:0,69,797	0/0:16,0:16:42.13:0,42,526	0/0:25,0:25:66.20:0,66,817	0/0:13,0:13:39.12:0,39,491	0/0:26,0:26:66.19:0,66,807	0/0:21,0:21:60.19:0,60,755	0/0:27,0:27:78.21:0,78,953	0/0:20,0:20:48.09:0,48,584	0/0:20,0:20:60.18:0,60,743	0/0:23,0:23:63.20:0,63,792	0/0:26,0:26:75.22:0,75,929	0/0:28,0:28:84.26:0,84,1045	0/0:11,0:11:30.10:0,30,377	0/0:14,0:14:39.12:0,39,491	0/0:10,0:10:21.02:0,21,246	0/0:23,0:23:54.15:0,54,650	0/0:13,0:13:33.10:0,33,404	0/0:25,0:25:66.21:0,66,830	0/0:18,0:19:54.01:0,54,630	0/0:17,0:17:42.13:0,42,528	0/0:21,0:21:63.19:0,63,778	0/0:14,0:14:33.05:0,33,396	0/0:26,0:26:69.22:0,69,866	0/0:31,0:31:72.22:0,72,891	0/0:8,0:8:24.08:0,24,302
chr10	44843792	.	TAATAAATA	T	849.99	PASS	AC=20;AF=0.556;AN=36;BaseQRankSum=-1.517;DP=215;FS=1.685;HRun=0;HaplotypeScore=56.3924;InbreedingCoeff=0.4042;MQ=65.23;MQ0=1;MQRankSum=-1.312;QD=10.49;ReadPosRankSum=2.186;VQSLOD=1.0818;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	1/1:1,0:2:3.01:56,3,0	./.	./.	0/0:9,0:10:2.99:0,3,24	0/0:2,0:3:2.99:0,3,24	0/0:3,0:4:2.99:0,3,24	0/0:30,0:29:1.82:0,2,5	0/0:6,0:8:2.99:0,3,24	1/1:3,1:4:3.01:74,3,0	1/1:9,0:9:3.01:71,3,0	0/0:3,0:4:2.99:0,3,24	0/0:5,0:8:5.99:0,6,49	0/0:4,0:6:5.99:0,6,49	1/1:3,2:5:3.01:69,3,0	./.	1/1:11,0:11:1.09:61,1,0	1/1:9,4:13:6.02:143,6,0	1/1:15,2:17:6.02:148,6,0	./.	./.	./.	./.	./.	1/1:5,2:7:6.02:143,6,0	1/1:6,1:7:3.01:74,3,0	./.	1/1:6,0:6:6.02:134,6,0
chr10	44844078	.	CTTG	C	5463.39	PASS	AB=0.516;AC=13;AF=0.232;AN=56;BaseQRankSum=1.671;DP=525;FS=4.824;HRun=0;HaplotypeScore=146.5628;InbreedingCoeff=0.8991;MQ=83.64;MQ0=0;MQRankSum=-7.274;QD=47.10;ReadPosRankSum=-0.658;VQSLOD=6.5555;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,114,2516	0/0:7,0:7:21.07:0,21,484	0/0:12,0:12:33.10:0,33,667	0/0:24,0:24:63.16:0,63,1248	0/0:9,0:9:27.09:0,27,622	0/0:17,0:17:48.16:0,48,1081	0/0:13,0:13:39.13:0,39,899	1/1:1,23:24:72.25:1205,72,0	0/0:19,0:19:54.19:0,54,1245	1/1:0,22:22:63.20:1048,63,0	1/1:0,13:13:33.07:530,33,0	0/0:18,0:18:54.19:0,54,1245	0/0:24,0:24:69.20:0,69,1458	0/0:20,0:20:60.21:0,60,1383	1/1:0,15:15:42.14:715,42,0	0/1:1,15:16:21.08:686,0,21	0/0:30,0:30:90.29:0,90,1999	1/1:0,12:12:36.12:614,36,0	0/0:21,0:21:51.18:0,51,1176	0/0:15,0:15:42.14:0,42,941	0/0:37,0:37:96.33:0,96,2197	0/0:14,0:14:39.13:0,39,859	0/0:10,0:10:24.08:0,24,553	0/0:22,0:22:63.22:0,63,1453	1/1:0,14:14:39.13:665,39,0	0/0:16,0:16:48.16:0,48,1091	0/0:25,0:25:66.23:0,66,1519	0/0:11,0:11:30.10:0,30,692
chr10	44844236	.	C	CAGA	19537.63	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=7.723;DP=665;FS=2.120;HRun=0;HaplotypeScore=113.8735;InbreedingCoeff=0.9998;MQ=66.28;MQ0=0;MQRankSum=-7.782;QD=52.52;ReadPosRankSum=1.530;VQSLOD=6.6827;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,27:32:66.18:1426,66,0	1/1:0,17:17:45.15:1004,45,0	0/0:34,0:34:86.30:0,86,1312	0/0:32,0:32:93.31:0,93,1453	1/1:2,28:30:72.25:1605,72,0	0/0:29,0:29:84.29:0,84,1370	0/0:17,0:17:42.60:0,43,662	1/1:3,21:24:66.16:1254,66,0	0/0:20,0:20:54.17:0,54,857	1/1:5,26:32:78.22:1597,78,0	1/1:2,23:25:66.23:1455,66,0	0/0:26,0:26:69.24:0,69,1127	0/0:13,0:13:39.13:0,39,635	0/0:26,0:26:72.23:0,72,1146	1/1:1,12:13:27.09:603,27,0	1/1:2,16:18:42.10:937,42,0	0/0:21,0:21:54.18:0,54,876	1/1:3,19:22:51.18:1127,51,0	1/1:2,20:23:57.20:1234,57,0	1/1:2,19:22:57.20:1268,57,0	1/1:1,13:14:33.11:725,33,0	0/0:28,0:28:84.27:0,84,1348	0/0:25,0:25:69.24:0,69,1127	0/0:22,0:22:63.22:0,63,1029	1/1:0,21:20:54.19:1205,54,0	1/1:5,24:30:72:1582,72,0	1/1:2,32:36:81.22:1805,81,0	1/1:0,11:12:33.11:708,33,0
chr10	44844580	.	CAGTTTTATTCATAAT	C	5564.13	PASS	AB=0.595;AC=15;AF=0.268;AN=56;BaseQRankSum=10.198;DP=521;FS=99.884;HRun=0;HaplotypeScore=218.8970;InbreedingCoeff=0.8811;MQ=53.72;MQ0=4;MQRankSum=-9.621;QD=67.86;ReadPosRankSum=1.587;VQSLOD=1.3460;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:7,15:22:42.96:1077,0,43	0/0:18,0:17:51.15:0,51,3254	0/0:33,0:24:69.23:0,69,3777	0/0:21,0:11:24.08:0,24,1333	1/1:2,9:11:15.03:463,15,0	0/0:28,0:28:78.27:0,78,5585	0/0:17,0:17:51.18:0,51,3410	0/0:30,0:26:15.22:0,15,3189	0/0:21,0:21:54.19:0,54,3726	0/0:25,0:25:47.25:0,47,3886	0/0:28,0:28:81.28:0,81,4670	0/0:20,0:20:57.20:0,57,4179	0/0:23,0:23:54.64:0,55,3426	0/0:21,0:21:60.21:0,60,4055	0/0:17,0:17:45.15:0,45,2932	0/0:11,0:11:30.10:0,30,1759	0/0:19,0:19:54.17:0,54,3414	0/0:10,0:10:27.09:0,27,1441	1/1:3,9:11:24.05:698,24,0	1/1:3,6:9:15.05:668,15,0	1/1:2,4:6:9.03:363,9,0	0/0:28,0:28:78.27:0,78,5360	0/0:24,0:24:72.23:0,72,4666	0/0:17,0:17:42.14:0,42,2988	0/0:28,0:28:75.26:0,75,4444	1/1:1,4:5:12.04:540,12,0	1/1:3,8:11:21.07:945,21,0	1/1:0,6:6:18.06:810,18,0
chr10	44844787	.	AGGGG	A	2519.62	PASS	AB=0.947;AC=15;AF=0.395;AN=38;BaseQRankSum=7.630;DP=314;FS=3.258;HRun=11;HaplotypeScore=69.3237;InbreedingCoeff=0.8571;MQ=66.16;MQ0=18;MQRankSum=-8.086;QD=22.50;ReadPosRankSum=6.774;VQSLOD=1.2058;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	./.	1/1:0,9:8:24.08:375,24,0	0/0:19,0:12:27.09:0,27,517	0/0:15,0:6:18.06:0,18,385	./.	0/0:17,0:18:33.10:0,33,691	0/0:17,0:16:23.50:0,24,501	./.	0/1:17,1:18:16.82:17,0,555	1/1:3,13:15:33.08:513,33,0	1/1:2,11:12:27.08:422,27,0	0/0:11,0:10:15.05:0,15,282	0/0:14,0:12:18.06:0,18,353	0/0:21,0:19:21.07:0,21,382	1/1:5,9:10:15.03:234,15,0	1/1:0,14:8:18.06:282,18,0	0/0:15,0:25:18.05:0,18,289	1/1:2,5:6:12.04:188,12,0	./.	./.	./.	0/0:7,0:11:12.04:0,12,217	0/0:11,0:10:12.04:0,12,230	0/0:22,0:22:33.58:0,34,730	1/1:2,19:17:42.13:657,42,0	./.	./.	./.
chr10	44844893	.	TAGAGG	T	233	PASS	AC=2;AF=0.050;AN=40;BaseQRankSum=2.107;DP=417;FS=16.040;HRun=0;HaplotypeScore=117.4185;InbreedingCoeff=0.8885;MQ=53.10;MQ0=17;MQRankSum=-3.002;QD=25.89;ReadPosRankSum=-0.723;VQSLOD=2.4657;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	1/1:0,9:8:15.05:320,15,0	0/0:29,0:10:21.07:0,21,594	0/0:29,0:5:11.07:0,11,152	./.	0/0:20,0:19:51.17:0,51,1442	0/0:17,0:16:30.10:0,30,817	0/0:10,0:5:9.03:0,9,211	0/0:30,0:30:69.18:0,69,1894	0/0:24,0:22:63.21:0,63,1900	0/0:25,0:25:57.19:0,57,1646	0/0:12,0:11:30.10:0,30,940	0/0:19,0:17:35.75:0,36,960	0/0:18,0:17:33.11:0,33,1003	0/0:21,0:20:45.59:0,46,1220	0/0:19,0:18:42.14:0,42,1309	0/0:30,0:29:68.90:0,69,1970	0/0:8,0:8:24.07:0,24,621	./.	./.	./.	0/0:22,0:22:36.12:0,36,1063	0/0:20,0:20:48:0,48,1415	0/0:32,0:32:78.27:0,78,2371	0/0:19,0:19:54.18:0,54,1569	./.	./.	./.
chr10	44845580	.	C	CCA	7614.02	PASS	AB=0.538;AC=15;AF=0.268;AN=56;BaseQRankSum=16.251;DP=679;FS=4.723;HRun=0;HaplotypeScore=106.0048;InbreedingCoeff=0.8997;MQ=75.29;MQ0=0;MQRankSum=-7.293;QD=39.05;ReadPosRankSum=3.084;VQSLOD=7.0762;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,38:39:81.28:1512,81,0	0/0:11,0:11:27.09:0,27,396	0/0:20,0:20:57.19:0,57,823	0/0:28,0:28:69.19:0,69,961	1/1:1,23:24:39.13:710,39,0	0/0:26,0:26:72.20:0,72,998	0/0:18,0:18:51.16:0,51,721	0/0:26,0:26:78.25:0,78,1113	0/0:27,0:27:75.25:0,75,1100	0/0:20,0:20:60.19:0,60,850	0/0:24,0:23:63.13:0,63,861	0/0:37,0:37:99:0,99,1399	0/0:33,0:33:93.30:0,93,1343	0/0:25,0:25:75.24:0,75,1079	0/0:31,0:31:90.29:0,90,1305	0/0:17,0:17:48.15:0,48,687	0/0:30,0:30:82.51:0,83,1226	0/0:21,0:21:60.08:0,60,808	1/1:2,17:19:48.13:821,48,0	1/1:1,26:27:57.20:1054,57,0	1/1:1,21:24:48.16:898,48,0	0/0:26,0:26:75.14:0,75,980	0/0:31,0:31:65.96:0,66,905	0/0:13,0:13:36.11:0,36,510	0/0:20,0:20:48.15:0,48,686	0/1:5,29:35:17.90:1406,0,18	1/1:0,22:23:57.19:1045,57,0	1/1:0,4:4:9.03:168,9,0
chr10	44846121	.	GCAGCC	G	4760.32	PASS	AB=0.750;AC=11;AF=0.196;AN=56;BaseQRankSum=11.578;DP=665;FS=1.421;HRun=0;HaplotypeScore=210.5711;InbreedingCoeff=0.8850;MQ=76.66;MQ0=0;MQRankSum=-12.723;QD=56.00;ReadPosRankSum=-0.245;VQSLOD=5.1776;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,126,3163	0/0:9,0:9:27.09:0,27,828	0/0:26,0:26:74.71:0,75,2128	0/0:34,0:33:98.37:0,98,2999	0/0:30,0:30:62.81:0,63,1504	0/0:29,0:29:87.30:0,87,2848	0/0:24,0:24:69.24:0,69,2249	0/0:21,0:21:63.22:0,63,1997	0/0:21,0:21:63.22:0,63,1994	1/1:0,19:19:57.20:1238,57,0	1/1:1,16:17:44.84:801,45,0	0/0:25,0:25:75.26:0,75,2490	0/0:24,0:24:72.25:0,72,2397	0/0:33,0:33:99:0,99,3298	1/1:0,17:17:51.13:1021,51,0	1/1:1,11:12:36.11:725,36,0	0/0:21,0:21:60.21:0,60,1913	0/1:2,2:6:38.78:171,0,39	0/0:20,0:20:51.17:0,51,1140	0/0:34,0:34:90.31:0,90,2190	0/0:38,0:38:99:0,104,2585	0/0:21,0:21:60.19:0,60,1922	0/0:30,0:30:90.31:0,90,2847	0/0:33,0:33:99:0,99,3182	1/1:2,12:14:42.07:804,42,0	0/0:26,0:26:66.23:0,66,1564	0/0:25,0:25:72.25:0,72,1762	0/0:9,0:9:18.06:0,18,413
chr10	44846130	.	AG	A	2630.09	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=13.274;DP=672;FS=5.364;HRun=2;HaplotypeScore=168.1473;InbreedingCoeff=0.9916;MQ=74.31;MQ0=0;MQRankSum=-12.318;QD=30.23;ReadPosRankSum=-0.815;VQSLOD=2.8218;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,141,2152	0/0:9,0:9:27.09:0,27,429	0/0:25,0:25:75.14:0,75,1110	0/0:31,0:31:82.28:0,82,1298	0/0:31,0:31:66.02:0,66,1048	0/0:30,0:30:90.28:0,90,1391	0/0:29,0:29:81.28:0,81,1285	0/0:20,0:20:60.20:0,60,937	0/0:20,0:20:60.20:0,60,957	1/1:0,22:22:66.18:796,66,0	1/1:0,17:17:44.99:481,45,0	0/0:25,0:25:75.24:0,75,1162	0/0:29,0:29:87.27:0,87,1362	0/0:33,0:33:99:0,99,1582	1/1:2,17:19:57.11:624,57,0	1/1:0,11:11:33.10:391,33,0	0/0:21,0:21:60.18:0,60,912	1/1:3,2:5:13.17:103,13,0	0/0:19,0:19:42.14:0,42,671	0/0:35,0:35:84.29:0,84,1336	0/0:37,0:37:99:0,105,1651	0/0:22,0:22:66.22:0,66,1037	0/0:30,0:30:84.29:0,84,1337	0/0:34,0:34:99:0,102,1604	1/1:1,12:13:36.11:421,36,0	0/0:22,0:22:60.20:0,60,953	0/0:23,0:23:66.23:0,66,1054	0/0:9,0:9:15.05:0,15,240
chr10	44846390	.	G	GAC	5888.09	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=4.164;DP=615;FS=3.408;HRun=0;HaplotypeScore=123.4949;InbreedingCoeff=0.9897;MQ=67.35;MQ0=0;MQRankSum=-6.933;QD=34.23;ReadPosRankSum=-1.111;VQSLOD=6.6332;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,28:30:57.18:1041,57,0	0/0:12,0:12:33.11:0,33,472	0/0:15,0:14:30.93:0,31,351	0/0:24,0:25:27.49:0,27,646	1/1:4,21:25:26.72:493,27,0	0/0:18,0:18:54.17:0,54,755	0/0:31,0:31:90.27:0,90,1250	0/0:29,0:29:84.27:0,84,1169	0/0:26,0:26:75.25:0,75,1074	0/0:24,0:24:66.21:0,66,929	0/0:27,0:27:51.15:0,51,712	0/0:12,0:12:36.12:0,36,515	0/0:22,0:22:66.22:0,66,943	0/0:26,0:26:75.20:0,75,1018	0/0:27,0:27:78.26:0,78,1116	0/0:16,0:16:42.13:0,42,583	0/0:33,0:33:93.27:0,93,1292	0/0:16,0:16:45.15:0,45,644	1/1:2,13:18:51.12:782,51,0	1/1:3,18:21:39.13:714,39,0	1/1:0,29:29:60.20:1097,60,0	0/0:15,0:15:45.14:0,45,626	0/0:15,0:15:39.10:0,39,522	0/0:28,0:28:84.26:0,84,1183	0/0:26,0:26:67.07:0,67,907	1/1:6,20:26:57.15:980,57,0	1/1:3,17:20:35.91:616,36,0	1/1:0,3:3:9.03:165,9,0
chr10	44846421	.	TCTG	T	8348.71	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=14.168;DP=526;FS=19.285;HRun=0;HaplotypeScore=121.5517;InbreedingCoeff=0.9714;MQ=68.24;MQ0=0;MQRankSum=-11.410;QD=33.13;ReadPosRankSum=-0.805;VQSLOD=3.9686;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:22:45.07:701,45,0	1/1:0,7:7:18.06:300,18,0	0/0:26,0:26:36.91:0,37,1506	0/0:27,0:27:71.94:0,72,1527	1/1:18,0:18:24.08:381,24,0	0/0:17,0:17:45.15:0,45,1019	0/0:26,0:26:78.25:0,78,1723	1/1:2,20:22:60.19:974,60,0	0/0:19,0:19:57.20:0,57,1289	1/1:2,19:21:42.12:670,42,0	1/1:1,11:12:30.10:494,30,0	0/0:12,0:12:33.11:0,33,745	0/0:24,0:24:69.24:0,69,1563	0/0:21,0:21:63.20:0,63,1382	1/1:2,17:19:45.15:737,45,0	1/1:2,10:12:21.07:350,21,0	0/0:43,0:43:99:0,126,2848	1/1:0,23:23:63.22:1049,63,0	1/1:12,0:11:18.06:294,18,0	1/1:11,0:11:24.08:389,24,0	1/1:16,0:16:24.03:382,24,0	0/0:13,0:13:36.12:0,36,800	0/0:9,0:9:24.08:0,24,544	0/0:37,0:37:99:0,105,2328	1/1:2,17:19:39.13:648,39,0	1/1:16,1:17:24.06:392,24,0	1/1:19,0:19:33.11:539,33,0	1/1:2,0:2:3.01:49,3,0
chr10	44846424	.	GCT	G	2384.30	PASS	AB=0.836;AC=27;AF=0.482;AN=56;BaseQRankSum=16.198;DP=522;FS=14.404;HRun=0;HaplotypeScore=143.4446;InbreedingCoeff=0.6378;MQ=68.77;MQ0=0;MQRankSum=-10.633;QD=9.61;ReadPosRankSum=1.066;VQSLOD=2.6743;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,20:25:44.83:369,45,0	0/1:8,0:8:19.17:47,0,19	0/0:28,0:28:71.50:0,71,1486	0/0:26,0:26:72.25:0,72,1386	1/1:2,13:15:23.91:185,24,0	0/0:15,0:15:45.15:0,45,914	0/0:26,0:26:78.25:0,78,1547	0/1:23,0:23:56.50:150,0,56	0/0:21,0:21:63.22:0,63,1275	0/1:19,0:19:4.62:100,0,5	1/1:11,0:11:26.14:105,26,0	0/0:11,0:11:33.11:0,33,671	0/0:25,0:25:75.26:0,75,1521	0/0:21,0:21:63.20:0,63,1244	1/1:17,0:17:38.38:156,38,0	1/1:10,0:10:18.75:77,19,0	0/0:44,0:44:99:0,132,2659	1/1:23,0:23:56.25:232,56,0	0/1:2,7:8:14.80:140,0,15	1/1:2,9:11:23.98:206,24,0	1/1:6,12:18:26.89:216,27,0	0/0:12,0:12:36.12:0,36,731	0/0:9,0:9:24.08:0,24,487	0/0:36,0:36:99:0,105,2096	1/1:17,1:18:34.98:146,35,0	0/1:8,13:21:84.57:165,0,85	1/1:0,18:18:32.95:279,33,0	1/1:0,2:2:3:25,3,0
chr10	44846472	.	TGCC	T	1862.07	PASS	AB=0.515;AC=15;AF=0.268;AN=56;BaseQRankSum=12.589;DP=464;FS=60.822;HRun=0;HaplotypeScore=169.1668;InbreedingCoeff=0.8453;MQ=72.88;MQ0=0;MQRankSum=-11.935;QD=23.87;ReadPosRankSum=2.677;VQSLOD=1.1750;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,11:11:22.49:227,22,0	0/0:11,0:11:30.10:0,30,734	0/0:14,0:14:39.13:0,39,903	0/0:17,0:16:42.14:0,42,1009	1/1:0,18:18:50.50:563,51,0	0/0:17,0:17:51.18:0,51,1252	0/0:18,0:18:54.19:0,54,1331	0/0:32,0:32:96.33:0,96,2387	0/0:21,0:21:63.22:0,63,1521	0/0:26,0:26:69.24:0,69,1675	0/0:15,0:15:36.12:0,36,885	0/0:14,0:14:42.14:0,42,1035	0/0:20,0:20:60.21:0,60,1445	0/0:24,0:24:72.25:0,72,1745	0/0:14,0:14:33.11:0,33,812	0/0:12,0:12:33.11:0,33,743	0/0:46,0:46:99:0,135,3328	0/0:19,0:19:48.16:0,48,1183	1/1:0,4:4:3.01:38,3,0	1/1:0,14:14:36.11:429,36,0	1/1:0,3:3:8.24:79,8,0	0/0:12,0:12:36.12:0,36,887	0/0:15,0:15:45.15:0,45,1108	0/0:27,0:27:81.28:0,81,1979	0/0:12,0:12:21.07:0,21,517	0/1:1,16:17:14.40:392,0,14	1/1:0,8:8:21.06:248,21,0	1/1:0,3:3:6.02:74,6,0
chr10	44846478	.	AGTTGGGGGGTTGTC	A	6554.49	PASS	AB=0.515;AC=15;AF=0.268;AN=56;BaseQRankSum=12.804;DP=477;FS=60.873;HRun=0;HaplotypeScore=263.2707;InbreedingCoeff=0.8443;MQ=75.69;MQ0=0;MQRankSum=-11.579;QD=84.03;ReadPosRankSum=2.392;VQSLOD=2.7586;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,11:11:24.03:711,24,0	0/0:11,0:11:30.10:0,30,2118	0/0:16,0:16:33.55:0,34,2459	0/0:18,0:17:45.28:0,45,2789	1/1:0,18:18:51.18:1832,51,0	0/0:16,0:16:48.16:0,48,3295	0/0:17,0:17:51.18:0,51,3542	0/0:30,0:30:90.31:0,90,5102	0/0:21,0:21:63.22:0,63,3919	0/0:26,0:26:72.22:0,72,4170	0/0:15,0:15:36.12:0,36,2283	0/0:16,0:16:48.15:0,48,3167	0/0:22,0:22:66.23:0,66,4247	0/0:23,0:23:69.24:0,69,4655	0/0:17,0:17:42.14:0,42,2760	0/0:14,0:14:39.13:0,39,2569	0/0:49,0:49:99:0,148,9613	0/0:19,0:19:48.16:0,48,2891	1/1:0,4:4:3.01:114,3,0	1/1:0,14:14:36.12:1333,36,0	1/1:0,3:3:9:242,9,0	0/0:11,0:11:33.10:0,33,2186	0/0:16,0:16:48.16:0,48,3337	0/0:30,0:30:87.28:0,87,5884	0/0:12,0:12:27.09:0,27,1703	0/1:1,16:17:99:1311,0,174	1/1:0,8:8:21.07:788,21,0	1/1:0,3:3:6.02:224,6,0
chr10	44846513	.	AGGACCAGGAGAG	A	5607.58	PASS	AB=0.579;AC=15;AF=0.268;AN=56;BaseQRankSum=11.143;DP=509;FS=71.047;HRun=0;HaplotypeScore=266.9144;InbreedingCoeff=0.8128;MQ=83.89;MQ0=0;MQRankSum=-11.017;QD=55.52;ReadPosRankSum=3.603;VQSLOD=2.1538;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,8:15:12.04:412,12,0	0/0:15,0:15:39.13:0,39,1999	0/0:24,0:24:56.72:0,57,2735	0/0:22,0:21:50.48:0,50,2345	1/1:5,15:20:39.13:1426,39,0	0/0:18,0:18:51.18:0,51,2898	0/0:17,0:17:42.14:0,42,2429	0/0:17,0:17:42.14:0,42,2012	0/0:23,0:23:63.22:0,63,3429	0/0:22,0:22:60.21:0,60,2915	0/0:20,0:20:48.16:0,48,2576	0/0:17,0:17:39.13:0,39,2295	0/0:21,0:21:60.21:0,60,3377	0/0:16,0:16:45.15:0,45,2498	0/0:25,0:25:63.22:0,63,3345	0/0:15,0:15:42.14:0,42,2281	0/0:41,0:41:99:0,105,5790	0/0:16,0:16:33.11:0,33,1687	1/1:3,4:7:3.01:110,3,0	1/1:4,17:21:42.14:1537,42,0	1/1:2,1:3:3.01:82,3,0	0/0:14,0:14:39.13:0,39,2342	0/0:24,0:24:69.24:0,69,4082	0/0:20,0:20:54.19:0,54,2984	0/0:21,0:21:51.18:0,51,2741	0/1:6,16:22:7.53:1491,0,8	1/1:6,4:10:12.04:439,12,0	1/1:2,1:3:3.01:110,3,0
chr10	44846550	.	TATTA	T	5002.53	PASS	AB=0.771;AC=12;AF=0.222;AN=54;BaseQRankSum=6.990;DP=465;FS=3.851;HRun=0;HaplotypeScore=149.6449;InbreedingCoeff=0.7314;MQ=63.07;MQ0=1;MQRankSum=-1.131;QD=37.90;ReadPosRankSum=2.494;VQSLOD=5.3027;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:6.02:0,6,145	0/0:8,0:8:24.08:0,24,582	0/0:9,0:9:18.03:0,18,336	0/1:7,0:7:26.09:26,0,123	0/0:26,0:26:33.11:0,33,805	0/0:24,0:24:63.21:0,63,1475	0/0:10,0:10:27.08:0,27,624	0/0:30,0:30:84.27:0,84,1992	0/0:14,0:14:39.13:0,39,973	1/1:3,20:23:60.20:1041,60,0	1/1:2,16:18:48.08:797,48,0	0/0:14,0:14:42.14:0,42,986	0/0:21,0:21:63.22:0,63,1545	0/0:15,0:15:30.10:0,30,770	1/1:4,16:20:42.11:694,42,0	0/1:3,16:19:28.88:675,0,29	0/0:33,0:33:93.32:0,93,2286	1/1:2,12:13:27.09:477,27,0	0/0:11,0:11:21.07:0,21,538	0/0:23,0:23:57.15:0,57,1344	./.	0/0:6,0:6:15.05:0,15,385	0/0:24,0:24:63.22:0,63,1562	0/0:13,0:13:39.11:0,39,879	1/1:2,29:31:75.26:1293,75,0	0/0:19,0:19:39.13:0,39,978	0/0:14,0:14:33.10:0,33,746	0/0:2,0:2:3.01:0,3,69
chr10	44846701	.	G	GCCGTGTTCTA	7876.06	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=10.141;DP=480;FS=1.114;HRun=0;HaplotypeScore=155.3952;InbreedingCoeff=0.9313;MQ=97.29;MQ0=0;MQRankSum=-11.419;QD=84.69;ReadPosRankSum=0.589;VQSLOD=4.7340;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,6:11:3.01:35,3,0	0/0:9,0:9:27.09:0,27,900	0/0:36,0:36:78.28:0,78,2450	0/0:15,0:15:38.58:0,39,1004	1/1:8,9:17:42.14:2084,42,0	0/0:23,0:23:66.23:0,66,2151	0/0:25,0:25:72.22:0,72,2156	0/0:33,0:33:81.26:0,81,2383	0/0:11,0:11:30.10:0,30,854	0/0:23,0:23:60.21:0,60,1942	0/0:12,0:12:36.10:0,36,1011	0/0:15,0:15:45.12:0,45,1322	0/0:18,0:18:54.19:0,54,1801	0/0:24,0:24:72.25:0,72,2264	0/0:11,0:10:33.10:0,33,949	0/0:18,0:18:54.16:0,54,1579	0/0:29,0:29:84.27:0,84,2630	0/0:17,0:17:51.17:0,51,1548	1/1:3,2:5:3.01:32,3,0	1/1:10,10:20:48.16:2389,48,0	1/1:4,4:12:18.06:738,18,0	0/0:14,0:14:42.14:0,42,1337	0/0:19,0:19:57.20:0,57,1835	0/0:19,0:19:54.16:0,54,1626	0/0:16,0:15:48.16:0,48,1512	1/1:5,9:14:27.05:1040,27,0	1/1:2,3:8:12.04:611,12,0	1/1:1,5:6:18.06:948,18,0
chr10	44847335	.	AT	A	3880.27	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=16.440;DP=577;FS=28.120;HRun=6;HaplotypeScore=108.8208;InbreedingCoeff=0.9688;MQ=88.03;MQ0=0;MQRankSum=-13.953;QD=23.38;ReadPosRankSum=2.863;VQSLOD=1.9666;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,19:20:39.10:419,39,0	0/0:4,0:4:12.04:0,12,155	0/0:31,0:32:87.05:0,87,1100	0/0:14,0:14:33.09:0,33,404	1/1:5,25:30:48.11:515,48,0	0/0:24,0:24:72.23:0,72,947	0/0:14,0:14:42.14:0,42,552	0/0:22,0:22:54.16:0,54,688	0/0:20,0:20:60.20:0,60,789	0/0:25,0:25:72.23:0,72,932	0/0:25,0:25:75.18:0,75,940	0/0:18,0:18:51.15:0,51,654	0/0:26,0:26:78.24:0,78,1011	0/0:21,0:21:63.20:0,63,824	0/0:22,0:22:60.20:0,60,790	0/0:15,0:15:42.13:0,42,540	0/0:26,0:26:72.23:0,72,947	0/0:13,1:14:3.88:0,4,402	1/1:4,14:18:33.08:355,33,0	1/1:1,24:24:54.13:578,54,0	1/1:4,12:16:26.52:290,27,0	0/0:21,0:21:63.20:0,63,829	0/0:31,0:31:87.26:0,87,1116	0/0:15,0:15:42.14:0,42,553	0/0:22,0:22:63.19:0,63,815	1/1:1,23:24:69.17:741,69,0	1/1:0,25:25:72.10:757,72,0	1/1:1,7:8:21.05:225,21,0
chr10	44847365	.	A	AATTAATT	8792.82	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=15.255;DP=543;FS=46.321;HRun=0;HaplotypeScore=188.2208;InbreedingCoeff=0.9920;MQ=86.19;MQ0=0;MQRankSum=-15.162;QD=67.12;ReadPosRankSum=1.209;VQSLOD=3.0460;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,7:19:33.11:1056,33,0	0/0:7,0:7:18.05:0,18,420	0/0:24,0:24:60.21:0,60,1457	0/0:19,0:19:48.14:0,48,1024	1/1:17,7:24:45.15:1358,45,0	0/0:23,0:23:66.23:0,66,1669	0/0:22,0:22:63.22:0,63,1586	0/0:22,0:22:66.22:0,66,1661	0/0:24,0:24:69.22:0,69,1610	0/0:21,0:21:60.21:0,60,1560	0/0:22,0:22:63.22:0,63,1627	0/0:15,0:15:45.15:0,45,1137	0/0:22,0:22:63.22:0,63,1566	0/0:22,0:22:63.19:0,63,1488	0/0:25,0:25:69.24:0,69,1786	0/0:16,0:16:48.16:0,48,1208	0/0:30,0:30:87.25:0,87,2176	0/0:13,0:13:36.11:0,36,847	1/1:15,3:18:39.10:1076,39,0	1/1:10,8:18:39.13:1219,39,0	1/1:3,3:6:12.04:376,12,0	0/0:24,0:24:69.22:0,69,1706	0/0:26,0:26:78.25:0,78,1937	0/0:15,0:15:45.14:0,45,1073	0/0:20,0:20:54.19:0,54,1362	1/1:15,6:21:60.21:1869,60,0	1/1:15,4:19:48.13:1322,48,0	1/1:6,0:6:18.06:514,18,0
chr10	44847368	.	G	GAATTA	2056.75	PASS	AC=14;AF=0.259;AN=54;BaseQRankSum=9.274;DP=448;FS=8.619;HRun=0;HaplotypeScore=112.1731;InbreedingCoeff=0.9479;MQ=91.83;MQ0=0;MQRankSum=-9.272;QD=52.74;ReadPosRankSum=4.358;VQSLOD=4.0550;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,7:7:18.06:413,18,0	0/0:8,0:8:21.07:0,21,465	0/0:25,0:25:63.22:0,63,1376	0/0:17,0:17:51.01:0,51,991	1/1:0,7:7:12.04:295,12,0	0/0:23,0:23:66.18:0,66,1481	0/0:21,0:21:63.22:0,63,1458	0/0:21,0:21:63.22:0,63,1455	0/0:24,0:24:69.22:0,69,1556	0/0:21,0:21:63.21:0,63,1425	0/0:23,0:23:66.19:0,66,1436	0/0:15,0:15:45.14:0,45,1005	0/0:22,0:22:63.20:0,63,1419	0/0:22,0:22:63.21:0,63,1339	0/0:24,0:24:72.25:0,72,1653	0/0:16,0:16:48.16:0,48,1089	0/0:30,0:30:87.28:0,87,1958	0/0:12,0:12:36.11:0,36,790	1/1:0,3:3:6.02:152,6,0	1/1:1,8:9:21.07:516,21,0	1/1:0,3:3:9.03:188,9,0	0/0:26,0:26:72.23:0,72,1627	0/0:26,0:26:75.24:0,75,1691	0/0:14,0:14:42.14:0,42,953	0/0:19,0:19:54.17:0,54,1210	1/1:0,6:6:18.06:452,18,0	1/1:0,4:4:9.03:223,9,0	./.
chr10	44847370	.	TG	T	406.10	PASS	AC=14;AF=0.259;AN=54;BaseQRankSum=8.995;DP=445;FS=6.034;HRun=1;HaplotypeScore=81.1352;InbreedingCoeff=0.9331;MQ=89.32;MQ0=0;MQRankSum=-8.967;QD=10.41;ReadPosRankSum=4.012;VQSLOD=1.7049;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,7:7:14.85:104,15,0	0/0:8,0:8:24.08:0,24,380	0/0:23,0:23:65.74:0,66,967	0/0:16,0:16:42.14:0,42,653	1/1:0,7:7:11.81:75,12,0	0/0:23,0:23:66.22:0,66,1050	0/0:21,0:21:63.18:0,63,956	0/0:21,0:21:63.21:0,63,985	0/0:24,0:24:72.23:0,72,1122	0/0:21,0:21:63.21:0,63,989	0/0:23,0:23:69.22:0,69,1076	0/0:16,0:16:48.03:0,48,689	0/0:21,0:21:60.20:0,60,957	0/0:21,0:21:63.19:0,63,959	0/0:24,0:24:72.25:0,72,1151	0/0:17,0:17:51.13:0,51,746	0/0:31,0:31:90.24:0,90,1362	0/0:13,0:13:39.09:0,39,592	1/1:0,3:3:5.98:47,6,0	1/1:1,8:9:20.67:135,21,0	1/1:0,3:3:5.16:41,5,0	0/0:26,0:26:78.25:0,78,1219	0/0:26,0:26:78.23:0,78,1189	0/0:13,0:13:39.13:0,39,623	0/0:18,0:18:54.18:0,54,859	1/1:0,6:6:17.85:128,18,0	1/1:0,4:4:8.88:58,9,0	./.
chr10	44848254	.	C	CT	5808.65	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=13.066;DP=484;FS=10.374;HRun=2;HaplotypeScore=90.4406;InbreedingCoeff=0.9936;MQ=92.87;MQ0=0;MQRankSum=-4.027;QD=38.47;ReadPosRankSum=2.309;VQSLOD=4.7346;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,35:36:99:1402,99,0	0/0:9,0:9:27.08:0,27,334	0/0:26,0:25:60.16:0,60,720	0/0:31,0:31:90.20:0,90,1048	1/1:0,25:25:72.24:1036,72,0	0/0:17,0:17:51.14:0,51,619	0/0:16,0:16:45.12:0,45,533	0/0:17,0:17:39.12:0,39,483	0/0:16,0:16:48.15:0,48,595	0/0:26,0:26:66.19:0,66,799	0/0:17,0:17:51.16:0,51,632	0/0:13,0:13:36.11:0,36,446	0/0:10,0:10:24.07:0,24,298	0/0:17,0:17:48.15:0,48,595	0/0:7,0:7:21:0,21,241	0/0:19,1:20:54.17:0,54,666	0/0:14,0:14:39.12:0,39,483	0/0:7,0:7:21.07:0,21,260	1/1:0,14:14:42.14:601,42,0	1/1:0,18:18:48.16:691,48,0	1/1:1,18:19:48.16:691,48,0	0/0:14,0:14:42.13:0,42,521	0/0:20,0:20:57.18:0,57,707	0/0:16,0:16:48.15:0,48,595	0/0:20,0:20:54.17:0,54,669	1/1:1,18:19:16.98:696,17,0	1/1:0,13:13:33.11:475,33,0	1/1:2,5:7:15.05:216,15,0
chr10	44848398	.	T	TATGGGTTGGTTAGCC	54308.62	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=4.599;DP=578;FS=1.067;HRun=0;HaplotypeScore=226.8373;InbreedingCoeff=0.9533;MQ=88.34;MQ0=0;MQRankSum=-18.885;QD=163.09;ReadPosRankSum=0.170;VQSLOD=5.0395;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,7:16:39.13:2571,39,0	1/1:11,4:17:48.16:3089,48,0	0/0:26,0:26:75.23:0,75,2736	0/0:29,0:29:78.19:0,78,2794	1/1:12,11:22:42.14:2666,42,0	0/0:20,0:20:60.21:0,60,2460	0/0:18,0:18:51.18:0,51,2220	1/1:26,1:28:75.26:4039,75,0	0/0:21,0:21:63.22:0,63,2670	1/1:23,14:38:99:7187,108,0	1/1:11,10:24:57.20:3850,57,0	0/0:17,0:17:51.16:0,51,2013	0/0:17,0:17:48.16:0,48,2013	0/0:16,0:16:45.15:0,45,1642	1/1:5,10:17:45.15:3160,45,0	1/1:10,11:22:63.22:4180,63,0	0/0:14,0:14:42.14:0,42,1831	1/1:4,0:4:9.03:556,9,0	1/1:6,7:13:36.12:2529,36,0	1/1:17,13:27:69.19:4404,69,0	1/1:6,0:6:6.02:290,6,0	0/0:23,0:23:69.24:0,69,2926	0/0:28,0:28:78.27:0,78,3133	0/0:16,0:16:48.16:0,48,2139	1/1:16,15:33:87.30:5778,87,0	1/1:15,7:22:57.20:3381,57,0	1/1:23,13:36:99:6406,105,0	1/1:1,2:3:3.01:223,3,0
chr10	44848423	.	C	CTGAAT	10075.71	PASS	AB=0.667;AC=15;AF=0.268;AN=56;BaseQRankSum=1.831;DP=562;FS=0.840;HRun=0;HaplotypeScore=174.7651;InbreedingCoeff=0.8825;MQ=86.04;MQ0=0;MQRankSum=-12.568;QD=65.85;ReadPosRankSum=-0.641;VQSLOD=5.4169;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,16:24:54.18:1479,54,0	0/0:12,0:11:30.10:0,30,629	0/0:28,0:28:66.22:0,66,1321	0/0:20,0:19:45.11:0,45,826	1/1:8,15:22:36.12:1033,36,0	0/0:28,0:27:81.28:0,81,1680	0/0:17,0:17:42.13:0,42,842	0/0:32,0:32:81.28:0,81,1698	0/0:21,0:21:57.15:0,57,1081	0/0:29,0:29:87.27:0,87,1785	0/0:18,0:18:51.18:0,51,1068	0/0:19,0:19:54.19:0,54,1133	0/0:18,0:18:45.11:0,45,902	0/0:17,0:17:51.16:0,51,1032	0/0:13,0:13:30.08:0,30,588	0/0:22,0:22:66.23:0,66,1384	0/0:14,0:14:35.99:0,36,756	0/0:4,0:4:12.04:0,12,252	1/1:3,9:12:36.12:1058,36,0	1/1:5,25:29:75.25:1962,75,0	1/1:3,8:11:24.08:630,24,0	0/0:26,0:26:66.22:0,66,1347	0/0:32,0:32:87.28:0,87,1786	0/0:19,0:19:54.11:0,54,1013	0/0:20,0:20:45.13:0,45,904	0/1:10,10:20:8.77:1343,0,9	1/1:7,22:29:87.30:2478,87,0	1/1:1,2:3:3.01:93,3,0
chr10	44848882	.	G	GTTTA	9939.52	PASS	AB=0.594;AC=15;AF=0.268;AN=56;BaseQRankSum=10.875;DP=658;FS=4.284;HRun=0;HaplotypeScore=127.4943;InbreedingCoeff=0.9106;MQ=80.55;MQ0=0;MQRankSum=-9.505;QD=53.73;ReadPosRankSum=0.481;VQSLOD=6.2244;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,15:20:36.12:930,36,0	0/0:8,0:8:21.05:0,21,351	0/0:20,0:21:43.02:0,43,735	0/0:21,0:21:57.18:0,57,955	1/1:5,28:35:69.04:1589,69,0	0/0:25,0:25:69.21:0,69,1195	0/0:28,0:28:69.22:0,69,1209	0/0:23,0:23:51.17:0,51,900	0/0:30,0:30:84.26:0,84,1462	0/0:32,0:32:90.28:0,90,1554	0/0:31,0:31:87.22:0,87,1486	0/0:20,0:20:60.21:0,60,1086	0/0:31,0:31:81.22:0,81,1381	0/0:36,0:36:99:0,99,1769	0/0:20,0:20:57.20:0,57,1036	0/0:17,0:17:48.13:0,48,813	0/0:30,0:30:90.20:0,90,1526	0/0:10,0:10:30.10:0,30,545	1/1:5,13:17:36.12:909,36,0	1/1:4,32:37:93.32:2316,93,0	1/1:4,12:16:36.12:877,36,0	0/0:25,0:25:72.25:0,72,1309	0/0:28,0:28:78.21:0,78,1299	0/0:24,0:23:63.18:0,63,1072	0/0:13,0:13:30.10:0,30,538	0/1:6,11:19:15.45:811,0,15	1/1:5,22:27:63.22:1646,63,0	1/1:0,13:13:33.11:861,33,0
chr10	44849107	.	C	CAAA	5569.80	PASS	AB=0.576;AC=15;AF=0.268;AN=56;BaseQRankSum=4.642;DP=526;FS=7.577;HRun=7;HaplotypeScore=92.6575;InbreedingCoeff=0.9193;MQ=73.95;MQ0=0;MQRankSum=-3.243;QD=39.78;ReadPosRankSum=0.684;VQSLOD=4.0130;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,19:21:48.12:883,48,0	0/0:4,0:4:9.02:0,9,123	0/0:10,0:10:21.98:0,22,275	0/0:19,0:19:19.14:0,19,425	1/1:1,12:14:30.06:536,30,0	0/0:31,0:31:90.29:0,90,1222	0/0:17,0:17:45.14:0,45,614	0/0:22,0:22:60.17:0,60,798	0/0:18,0:18:51.17:0,51,695	0/0:28,0:28:78.24:0,78,1045	0/0:21,0:21:63.20:0,63,844	0/0:23,0:23:69.23:0,69,940	0/0:21,0:21:60.19:0,60,818	0/0:36,0:36:99:0,108,1435	0/0:15,0:15:36.09:0,36,473	0/0:15,0:15:42.14:0,42,573	0/0:18,0:18:42.09:0,42,547	0/0:9,0:9:21.06:0,21,287	1/1:2,16:18:48.16:934,48,0	1/1:6,16:26:51.10:869,51,0	1/1:1,12:15:33.11:639,33,0	0/0:20,0:20:51.12:0,51,660	0/0:26,0:26:75.23:0,75,1004	0/0:20,0:20:57.17:0,57,759	0/0:12,0:12:33.06:0,33,423	0/1:5,12:19:4.81:530,0,5	1/1:6,13:19:36.12:743,36,0	1/1:0,7:7:21.07:436,21,0
chr10	44849873	.	C	CACAAA	5794.12	PASS	AC=26;AF=0.500;AN=52;BaseQRankSum=13.268;DP=387;FS=2.749;HRun=0;HaplotypeScore=115.5033;InbreedingCoeff=0.9158;MQ=95.21;MQ0=0;MQRankSum=-12.141;QD=57.37;ReadPosRankSum=1.740;VQSLOD=5.5752;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,9:11:20.71:419,21,0	0/0:8,0:8:21.04:0,21,372	0/0:22,0:22:66.22:0,66,1386	0/0:26,0:27:65.21:0,65,1200	./.	0/0:28,0:28:84.29:0,84,1909	0/0:25,0:25:69.24:0,69,1605	1/1:2,0:2:6.01:84,6,0	0/0:26,0:26:78.25:0,78,1728	1/1:10,0:10:27.05:681,27,0	1/1:14,0:12:36.08:827,36,0	0/0:20,0:20:60.19:0,60,1335	0/0:18,0:18:48.16:0,48,1118	0/0:21,0:21:60.19:0,60,1349	1/1:10,0:10:30.09:753,30,0	1/1:12,0:12:36.09:895,36,0	0/0:31,0:31:93.30:0,93,2049	1/1:2,0:2:6.02:172,6,0	1/1:1,3:4:8.99:179,9,0	1/1:2,4:6:6.02:154,6,0	1/1:1,2:3:3.01:77,3,0	0/0:18,0:18:51.16:0,51,1110	0/0:20,0:20:57.16:0,57,1193	0/0:22,0:22:66.19:0,66,1424	1/1:13,0:11:21.06:471,21,0	1/1:0,8:8:24.08:628,24,0	1/1:1,5:6:18.06:456,18,0	./.
chr10	44849874	.	T	TATATATCA	6320.84	PASS	AB=1.000;AC=22;AF=0.423;AN=52;BaseQRankSum=13.949;DP=416;FS=8.549;HRun=0;HaplotypeScore=159.2654;InbreedingCoeff=0.7730;MQ=92.04;MQ0=0;MQRankSum=-13.738;QD=50.57;ReadPosRankSum=3.824;VQSLOD=4.1491;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,9:18:24.08:902,24,0	0/0:8,0:8:18.06:0,18,449	0/0:22,0:22:64.46:0,64,1701	0/0:28,0:28:74.80:0,75,1601	./.	0/0:28,0:28:84.27:0,84,2362	0/0:26,0:26:72.22:0,72,2009	0/0:2,0:2:5.68:0,6,37	0/0:26,0:26:78.25:0,78,2181	1/1:10,0:10:12.46:335,12,0	0/1:13,0:11:16.45:403,0,16	0/0:21,0:21:60.19:0,60,1636	0/0:18,0:18:51.16:0,51,1478	0/0:22,0:22:60.17:0,60,1604	0/1:10,0:10:17.18:342,0,17	1/1:10,0:10:30.10:458,30,0	0/0:30,0:30:90.30:0,90,2476	1/1:2,0:2:6.02:85,6,0	1/1:8,3:10:24.04:653,24,0	1/1:2,4:6:6.02:231,6,0	1/1:7,2:9:6.02:230,6,0	0/0:18,0:18:54.16:0,54,1430	0/0:21,0:21:60.12:0,60,1547	0/0:21,0:21:60.21:0,60,1816	1/1:12,0:10:18.06:271,18,0	1/1:4,8:12:36.12:1406,36,0	1/1:7,4:11:32.78:1004,33,0	./.
chr10	44849875	.	C	CAAA	3688.47	PASS	AB=0.968;AC=22;AF=0.423;AN=52;BaseQRankSum=13.212;DP=417;FS=4.269;HRun=0;HaplotypeScore=129.5614;InbreedingCoeff=0.6274;MQ=91.58;MQ0=0;MQRankSum=-12.977;QD=29.27;ReadPosRankSum=4.970;VQSLOD=3.5277;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:17,0:18:43.11:205,0,43	0/0:0,0:8:18.01:0,18,161	0/0:22,0:22:66.22:0,66,1170	0/0:28,0:28:74.85:0,75,1234	./.	0/0:28,0:28:84.29:0,84,1546	0/0:26,0:26:75.24:0,75,1344	1/1:1,0:1:3:28,3,0	0/0:26,0:26:78.25:0,78,1423	1/1:2,8:10:27.06:467,27,0	1/1:0,11:9:27.09:518,27,0	0/0:21,0:21:63.19:0,63,1113	0/0:21,0:21:51.17:0,51,943	0/0:22,0:22:63.20:0,63,1122	1/1:1,8:9:27.08:494,27,0	1/1:0,10:10:30.10:585,30,0	0/0:31,0:31:90.29:0,90,1637	1/1:0,2:2:6.02:119,6,0	0/1:11,0:10:89.10:157,0,89	1/1:7,0:7:6.02:78,6,0	0/1:9,0:9:10.46:33,0,10	0/0:17,0:17:51.17:0,51,927	0/0:20,0:20:60.17:0,60,1047	0/0:21,0:21:63.20:0,63,1142	1/1:0,12:10:18.04:284,18,0	1/1:14,0:14:36.12:465,36,0	0/1:11,0:11:77.51:257,0,78	./.
chr10	44849878	.	T	TA	455.24	PASS	AB=0.520;AC=11;AF=0.212;AN=52;BaseQRankSum=9.348;DP=421;FS=5.688;HRun=1;HaplotypeScore=114.7494;InbreedingCoeff=0.8085;MQ=91.32;MQ0=0;MQRankSum=-8.676;QD=8.13;ReadPosRankSum=3.821;VQSLOD=1.3003;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:26.83:0,27,244	0/0:8,0:8:13.32:0,13,42	0/0:22,0:22:66.19:0,66,872	0/0:28,0:28:67.83:0,68,926	./.	0/0:27,0:27:81.24:0,81,1097	0/0:28,0:28:81.25:0,81,1095	0/0:2,0:2:2.96:0,3,19	0/0:25,0:25:75.24:0,75,1033	1/1:1,8:9:23.43:157,23,0	1/1:1,11:10:25.19:118,25,0	0/0:21,0:21:60.19:0,60,823	0/0:21,0:21:60.20:0,60,832	0/0:22,0:22:66.20:0,66,886	1/1:2,8:10:14.55:107,15,0	1/1:0,10:10:28.74:151,29,0	0/0:30,0:30:90.27:0,90,1206	1/1:0,2:2:5.85:34,6,0	0/0:11,0:10:27:0,27,318	0/0:7,0:7:5.92:0,6,39	0/0:9,0:9:2.97:0,3,20	0/0:17,0:17:51.14:0,51,692	0/0:19,0:19:57.19:0,57,797	0/0:21,0:21:63.21:0,63,881	0/1:1,12:11:1.81:55,0,2	0/0:15,0:15:38.75:0,39,360	0/0:12,0:11:21.61:0,22,201	./.
chr10	44849879	.	T	TATATCTC	7318.49	PASS	AB=1.000;AC=21;AF=0.404;AN=52;BaseQRankSum=13.183;DP=468;FS=6.563;HRun=0;HaplotypeScore=178.2800;InbreedingCoeff=0.5706;MQ=85.78;MQ0=0;MQRankSum=-13.851;QD=40.89;ReadPosRankSum=3.360;VQSLOD=4.3328;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:20,0:20:99:136,0,192	0/0:9,0:9:18.06:0,18,279	0/0:21,0:21:63.21:0,63,1556	0/0:27,0:27:75.19:0,75,1677	./.	0/0:25,0:25:75.26:0,75,2013	0/0:28,0:28:78.26:0,78,2035	1/1:21,0:18:45.14:1250,45,0	0/0:27,0:27:75.24:0,75,1952	1/1:3,7:11:30.10:875,30,0	1/1:9,11:18:42.13:1168,42,0	0/0:21,0:21:63.19:0,63,1522	0/0:22,0:22:60.21:0,60,1570	0/0:22,0:22:63.20:0,63,1615	1/1:7,8:15:45.14:1214,45,0	1/1:6,10:16:36.12:1090,36,0	0/0:29,0:29:87.27:0,87,2189	1/1:0,2:2:6.02:185,6,0	0/1:12,0:11:81.89:82,0,214	1/1:7,0:7:6.01:61,6,0	0/1:9,0:9:21.03:21,0,26	0/0:17,0:17:48.16:0,48,1293	0/0:19,0:19:57.20:0,57,1544	0/0:22,0:22:63.22:0,63,1750	1/1:5,12:15:30.09:794,30,0	0/1:15,0:15:11.91:271,0,12	0/1:14,0:13:75.39:173,0,75	./.
chr10	44850288	.	CCT	C	1832.32	PASS	AB=0.526;AC=13;AF=0.241;AN=54;BaseQRankSum=11.100;DP=522;FS=9.007;HRun=0;HaplotypeScore=130.1731;InbreedingCoeff=0.8414;MQ=76.69;MQ0=0;MQRankSum=-10.608;QD=24.76;ReadPosRankSum=2.107;VQSLOD=4.5904;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,7:7:9.03:132,9,0	0/0:15,0:15:42.09:0,42,718	0/0:28,0:28:84.29:0,84,1520	0/0:18,0:18:35.15:0,35,812	1/1:1,13:14:27.09:397,27,0	0/0:25,0:25:72.25:0,72,1349	0/0:20,0:20:60.21:0,60,1114	0/0:37,0:37:99:0,108,1992	0/0:23,0:23:66.23:0,66,1236	0/0:25,0:25:75.25:0,75,1362	0/0:24,0:24:63.22:0,63,1179	0/0:34,0:34:96.33:0,96,1798	0/0:25,0:25:75.26:0,75,1405	0/0:25,0:25:75.24:0,75,1365	0/0:17,0:17:51.17:0,51,949	0/0:18,0:18:54.19:0,54,1010	0/0:23,0:23:69.24:0,69,1291	0/0:14,0:14:36.12:0,36,674	1/1:3,3:5:6.02:88,6,0	1/1:1,11:12:21.07:309,21,0	./.	0/0:23,0:23:60.21:0,60,1124	0/0:24,0:24:72.25:0,72,1349	0/0:17,0:17:45.15:0,45,843	0/0:13,0:13:30.10:0,30,559	0/1:1,9:10:35.15:244,0,35	1/1:0,23:23:51.17:750,51,0	1/1:0,2:2:6.02:88,6,0
chr10	44850331	.	A	AC	2546.85	PASS	AB=0.531;AC=13;AF=0.241;AN=54;BaseQRankSum=10.842;DP=530;FS=0.000;HRun=0;HaplotypeScore=113.2221;InbreedingCoeff=0.8719;MQ=87.38;MQ0=0;MQRankSum=-11.654;QD=27.99;ReadPosRankSum=-0.570;VQSLOD=3.2264;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,9:9:6.02:95,6,0	0/0:11,0:11:30.10:0,30,420	0/0:23,0:23:63.20:0,63,845	0/0:19,0:19:53.20:0,53,706	1/1:5,16:21:44.82:650,45,0	0/0:26,0:26:75.22:0,75,1012	0/0:21,0:21:63.19:0,63,851	0/0:32,0:32:93.24:0,93,1265	0/0:24,0:24:72.23:0,72,990	0/0:31,0:31:90.29:0,90,1244	0/0:25,0:25:60.13:0,60,799	0/0:24,0:24:69.23:0,69,965	0/0:21,0:21:63.16:0,63,844	0/0:26,0:26:78.26:0,78,1091	0/0:15,0:15:45.15:0,45,629	0/0:24,0:24:72.24:0,72,1007	0/0:20,0:20:60.17:0,60,804	0/0:13,0:13:39.09:0,39,523	1/1:3,5:8:18.02:259,18,0	1/1:2,7:9:18.06:285,18,0	./.	0/0:26,0:26:75.24:0,75,1034	0/0:30,0:30:87.28:0,87,1197	0/0:19,0:19:54.18:0,54,755	0/0:9,0:9:27.08:0,27,362	0/1:2,15:17:29.61:485,0,30	1/1:1,20:21:42.14:668,42,0	1/1:0,6:6:18.06:287,18,0
chr10	44850397	.	TG	T	3923.93	PASS	AB=0.526;AC=15;AF=0.268;AN=56;BaseQRankSum=13.391;DP=573;FS=15.085;HRun=1;HaplotypeScore=124.9829;InbreedingCoeff=0.8593;MQ=80.79;MQ0=0;MQRankSum=-10.967;QD=32.70;ReadPosRankSum=0.059;VQSLOD=1.8825;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,10:10:12.04:167,12,0	0/0:7,0:7:21.07:0,21,336	0/0:13,0:13:39.13:0,39,607	0/0:22,0:22:63.17:0,63,939	1/1:0,23:23:57.19:794,57,0	0/0:27,0:27:81.26:0,81,1272	0/0:24,0:24:72.21:0,72,1103	0/0:33,0:33:99:0,99,1581	0/0:25,0:25:75.26:0,75,1197	0/0:38,0:38:99:0,108,1727	0/0:27,0:27:75.26:0,75,1196	0/0:23,0:23:69.22:0,69,1081	0/0:24,0:24:72.25:0,72,1149	0/0:20,0:20:60.20:0,60,959	0/0:16,0:16:48.15:0,48,745	0/0:21,0:21:63.21:0,63,1007	0/0:15,0:15:45.15:0,45,716	0/0:10,0:10:30.10:0,30,479	1/1:0,13:13:39.13:545,39,0	1/1:0,26:26:72.24:1003,72,0	1/1:0,3:3:3.01:42,3,0	0/0:31,0:31:93.32:0,93,1486	0/0:31,0:31:90.30:0,90,1421	0/0:26,0:26:78.27:0,78,1247	0/0:19,0:19:48.15:0,48,744	0/1:2,18:20:44.81:578,0,45	1/1:0,20:20:48.16:670,48,0	1/1:0,5:5:9.03:126,9,0
chr10	44850734	.	A	AGAG	10143.84	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=11.686;DP=511;FS=36.777;HRun=0;HaplotypeScore=115.6398;InbreedingCoeff=0.9504;MQ=71.13;MQ0=0;MQRankSum=-15.981;QD=44.69;ReadPosRankSum=-2.148;VQSLOD=3.3676;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,19:27:45.11:955,45,0	1/1:2,11:13:29.99:678,30,0	0/0:15,0:15:38.14:0,38,571	0/0:18,0:18:48.16:0,48,754	1/1:2,17:19:18.06:372,18,0	0/0:24,0:24:72.25:0,72,1197	0/0:20,0:20:54.18:0,54,897	1/1:3,9:12:33.09:674,33,0	0/0:25,0:25:72.23:0,72,1172	1/1:2,5:7:18.06:393,18,0	1/1:4,11:15:35.04:702,35,0	0/0:17,0:17:48.16:0,48,797	0/0:19,0:19:54.18:0,54,899	0/0:24,0:24:60.19:0,60,972	1/1:1,9:10:30.10:670,30,0	1/1:3,11:14:6.32:716,6,0	0/0:31,0:31:87.27:0,87,1406	1/1:0,4:4:9:157,9,0	1/1:8,7:15:33.11:628,33,0	1/1:2,14:16:36.12:812,36,0	1/1:8,6:14:18.06:406,18,0	0/0:29,0:29:78.27:0,78,1293	0/0:36,0:36:96.33:0,96,1596	0/0:26,0:26:75.23:0,75,1192	1/1:1,11:12:33.11:732,33,0	1/1:3,16:18:45.15:1004,45,0	1/1:2,24:25:54.18:1176,54,0	1/1:0,4:4:3.01:68,3,0
chr10	44851233	.	T	TAGC	16068.88	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=12.607;DP=550;FS=3.817;HRun=0;HaplotypeScore=99.9642;InbreedingCoeff=0.9766;MQ=51.45;MQ0=3;MQRankSum=-8.426;QD=54.66;ReadPosRankSum=0.660;VQSLOD=6.9860;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,17:23:54.19:1206,54,0	0/0:12,0:12:36.12:0,36,603	0/0:8,0:8:21.06:0,21,322	0/0:11,0:10:27.05:0,27,413	1/1:5,21:26:57.18:1223,57,0	0/0:29,0:29:84.29:0,84,1430	0/0:12,0:12:36.12:0,36,614	1/1:6,15:22:51.16:1130,51,0	0/0:22,0:22:66.21:0,66,1099	1/1:3,22:25:72.25:1644,72,0	1/1:2,22:24:63.21:1365,63,0	0/0:19,0:19:48.16:0,48,819	0/0:26,0:26:78.24:0,78,1272	0/0:24,0:24:72.25:0,72,1228	1/1:1,24:25:72.25:1640,72,0	1/1:4,17:21:9.02:1211,9,0	0/0:30,0:30:55.55:0,56,1333	1/1:0,13:13:36.12:829,36,0	1/1:5,10:12:27.09:598,27,0	1/1:4,18:23:48.16:1055,48,0	1/1:0,11:11:27.09:586,27,0	0/0:25,0:25:69.18:0,69,1118	0/0:22,0:22:63.22:0,63,1066	0/0:16,0:16:48.16:0,48,819	1/1:2,15:17:45.14:994,45,0	1/1:5,19:27:66.23:1416,66,0	1/1:1,16:19:45.15:1035,45,0	1/1:0,2:2:6.02:138,6,0
chr10	44851315	.	AAC	A	3662.54	PASS	AB=0.533;AC=13;AF=0.232;AN=56;BaseQRankSum=7.931;DP=571;FS=4.522;HRun=0;HaplotypeScore=112.1268;InbreedingCoeff=0.8405;MQ=52.28;MQ0=14;MQRankSum=-7.071;QD=33.60;ReadPosRankSum=-0.937;VQSLOD=5.0800;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:51.03:0,51,914	0/0:15,0:15:45.15:0,45,824	0/0:21,0:4:11.52:0,12,142	0/0:20,0:3:9.03:0,9,155	0/0:17,0:17:42.14:0,42,768	0/0:37,0:37:99:0,108,1954	0/0:13,0:13:36.12:0,36,660	1/1:1,13:9:27.08:370,27,0	0/0:24,0:24:66.19:0,66,1141	1/1:2,29:30:81.27:1158,81,0	1/1:3,14:17:42.10:566,42,0	0/0:26,0:26:78.25:0,78,1390	0/0:22,0:22:66.20:0,66,1155	0/0:23,0:23:66.23:0,66,1199	1/1:2,11:13:36.11:499,36,0	0/1:1,7:8:30.91:277,0,31	0/0:25,0:25:63.22:0,63,1127	1/1:7,5:11:1.94:234,2,0	0/0:12,0:9:27.09:0,27,494	0/0:27,0:27:57.19:0,57,985	0/0:19,0:19:54.18:0,54,977	0/0:18,0:18:51.17:0,51,935	0/0:25,0:25:69.24:0,69,1254	0/0:23,0:23:66.20:0,66,1177	1/1:1,13:14:39.13:558,39,0	0/0:35,1:36:62.45:0,62,1824	0/0:26,0:26:75.26:0,75,1372	0/0:8,0:8:24.08:0,24,439
chr10	44851343	.	GA	G	7530.55	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=16.887;DP=550;FS=3.916;HRun=7;HaplotypeScore=94.9312;InbreedingCoeff=0.9713;MQ=54.60;MQ0=2;MQRankSum=-8.391;QD=25.36;ReadPosRankSum=0.542;VQSLOD=5.0590;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,19:21:51.11:520,51,0	0/0:12,0:12:30.10:0,30,377	0/0:13,0:10:20.90:0,21,259	0/0:7,0:4:12.04:0,12,148	1/1:1,25:26:54.11:551,54,0	0/0:35,0:35:99:0,102,1270	0/0:11,0:11:27.07:0,27,325	1/1:5,5:9:12.02:122,12,0	0/0:18,0:18:51.15:0,51,628	1/1:3,34:37:99:1008,99,0	1/1:4,13:17:42.08:421,42,0	0/0:24,0:24:69.19:0,69,841	0/0:23,0:23:60.17:0,60,738	0/0:22,0:22:63.20:0,63,792	1/1:3,9:12:30.05:299,30,0	1/1:2,13:15:4.35:360,4,0	0/0:22,0:22:57.18:0,57,711	1/1:2,10:12:30.07:306,30,0	1/1:2,17:17:48.11:490,48,0	1/1:1,21:22:48.11:490,48,0	1/1:3,16:19:45.10:459,45,0	0/0:20,0:20:42.13:0,42,525	0/0:22,0:22:63.20:0,63,793	0/0:24,0:24:49.11:0,49,808	1/1:1,17:18:51.11:520,51,0	1/1:1,28:29:81.18:826,81,0	1/1:2,27:29:84.19:854,84,0	1/1:0,10:10:30.07:306,30,0
chr10	44851414	.	T	TA	4487.88	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=8.873;DP=565;FS=11.321;HRun=6;HaplotypeScore=121.1380;InbreedingCoeff=0.9914;MQ=59.10;MQ0=2;MQRankSum=-2.235;QD=26.56;ReadPosRankSum=-0.169;VQSLOD=3.2071;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,16:18:48.15:601,48,0	0/0:7,0:7:21.05:0,21,214	0/0:22,0:20:39.10:0,39,469	0/0:11,0:9:20.94:0,21,196	1/1:4,29:33:60.18:717,60,0	0/0:25,0:25:72.16:0,72,735	0/0:14,0:14:33.07:0,33,337	0/0:27,0:26:63.11:0,63,632	0/0:17,0:17:45.10:0,45,459	0/0:38,0:36:99:0,102,1038	0/0:17,0:17:42.09:0,42,426	0/0:18,0:18:51.10:0,51,514	0/0:22,0:22:63.14:0,63,641	0/0:19,0:19:54.12:0,54,551	0/0:15,0:15:39.08:0,39,397	0/0:15,0:15:32.18:0,32,374	0/0:31,0:31:90.20:0,90,912	0/0:16,0:16:33.54:0,34,336	1/1:2,18:17:42.12:515,42,0	1/1:4,30:33:72.23:905,72,0	1/1:2,13:15:36.12:453,36,0	0/0:19,0:19:57.13:0,57,581	0/0:25,0:25:60.09:0,60,603	0/0:21,0:21:54.12:0,54,551	0/0:14,0:14:42.09:0,42,427	1/1:3,13:16:11.58:457,12,0	1/1:3,22:25:51.16:641,51,0	1/1:3,5:7:18.02:198,18,0
chr10	44851482	.	CACAA	C	3943.41	PASS	AB=0.556;AC=13;AF=0.232;AN=56;BaseQRankSum=8.346;DP=613;FS=3.530;HRun=0;HaplotypeScore=139.5179;InbreedingCoeff=0.8952;MQ=53.81;MQ0=18;MQRankSum=-9.537;QD=41.08;ReadPosRankSum=-1.669;VQSLOD=3.8389;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:69.16:0,69,1650	0/0:13,0:13:39.13:0,39,1015	0/0:38,0:12:30.10:0,30,774	0/0:27,0:16:32.94:0,33,866	0/0:32,0:32:81.57:0,82,1931	0/0:27,0:26:72.25:0,72,1908	0/0:19,0:19:57.15:0,57,1477	1/1:7,8:9:15.04:245,15,0	0/0:17,0:17:48.16:0,48,1283	1/1:2,16:16:45.15:836,45,0	1/1:1,21:22:45.15:853,45,0	0/0:23,0:23:69.22:0,69,1800	0/0:25,0:25:75.26:0,75,2023	0/0:24,0:24:66.18:0,66,1707	1/1:1,8:9:24.08:453,24,0	1/1:1,7:8:24.08:447,24,0	0/0:31,0:31:84.27:0,84,2135	0/1:2,8:10:30.95:428,0,31	0/0:12,0:10:24.08:0,24,648	0/0:33,0:32:87.21:0,87,2170	0/0:26,0:26:72.25:0,72,1913	0/0:15,0:15:45.11:0,45,1141	0/0:32,0:32:96.33:0,96,2554	0/0:29,0:29:81.19:0,81,2017	1/1:2,12:14:36.12:682,36,0	0/0:31,0:31:87.30:0,87,2319	0/0:28,0:28:63.22:0,63,1670	0/0:11,0:11:30.10:0,30,809
chr10	44851533	.	AGAG	A	4851.45	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=8.413;DP=606;FS=11.851;HRun=0;HaplotypeScore=121.4997;InbreedingCoeff=0.9891;MQ=78.75;MQ0=0;MQRankSum=-7.016;QD=41.47;ReadPosRankSum=-0.451;VQSLOD=5.9168;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:90.31:0,90,2004	0/0:17,0:17:51.16:0,51,1108	0/0:28,0:28:54.12:0,54,1365	0/0:38,0:37:37.88:0,38,1696	0/0:26,0:26:63.21:0,63,1351	0/0:21,0:20:60.15:0,60,1269	0/0:18,0:18:51.13:0,51,1054	1/1:1,28:28:81.26:1293,81,0	0/0:18,0:18:54.19:0,54,1219	1/1:4,15:17:51.17:849,51,0	1/1:3,19:22:51.04:759,51,0	0/0:23,0:23:60.21:0,60,1357	0/0:15,0:15:39.12:0,39,822	0/0:19,0:19:48.16:0,48,1063	1/1:1,16:17:42.14:699,42,0	1/1:0,9:9:27.09:449,27,0	0/0:21,0:21:54.17:0,54,1159	1/1:1,3:4:9.03:150,9,0	0/0:20,0:20:57.19:0,57,1230	0/0:24,0:24:57.19:0,57,1246	0/0:26,0:26:72.25:0,72,1609	0/0:29,0:29:84.28:0,84,1855	0/0:30,0:30:84.27:0,84,1839	0/0:20,0:20:54.19:0,54,1223	1/1:0,17:17:44.95:653,45,0	0/0:30,0:30:84.28:0,84,1858	0/0:19,0:19:51.16:0,51,1077	0/0:16,0:16:39.12:0,39,839
chr10	44851633	.	GAAC	G	386.77	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-0.682;DP=573;FS=9.282;HRun=0;HaplotypeScore=144.5431;InbreedingCoeff=0.9034;MQ=57.26;MQ0=2;MQRankSum=1.419;QD=35.16;ReadPosRankSum=1.098;VQSLOD=4.2999;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:90.24:0,90,1865	1/1:0,11:11:30.10:481,30,0	0/0:26,0:20:60.18:0,60,1215	0/0:28,0:26:63.14:0,63,1207	0/0:12,0:12:27.09:0,27,594	0/0:21,0:21:54.18:0,54,1192	0/0:25,0:25:66.20:0,66,1404	0/0:25,0:18:42.14:0,42,926	0/0:22,0:22:66.21:0,66,1391	0/0:37,0:36:99:0,102,2198	0/0:16,0:16:36.12:0,36,773	0/0:22,0:22:63.20:0,63,1348	0/0:24,0:24:69.22:0,69,1469	0/0:21,0:21:60.20:0,60,1281	0/0:14,0:14:36.12:0,36,780	0/0:18,0:18:54.10:0,54,1098	0/0:25,0:25:66.23:0,66,1431	0/0:23,0:23:66.23:0,66,1454	0/0:20,0:19:51.18:0,51,1109	0/0:18,0:18:33.11:0,33,715	0/0:27,0:27:72.16:0,72,1539	0/0:15,0:15:45.15:0,45,981	0/0:13,0:13:36.11:0,36,743	0/0:23,0:23:66.16:0,66,1406	0/0:15,0:15:42.09:0,42,876	0/0:17,0:17:39.13:0,39,860	0/0:17,0:17:45.15:0,45,991	0/0:2,0:2:6.02:0,6,132
chr10	44851874	.	A	AG	1715.29	PASS	AB=0.636;AC=15;AF=0.268;AN=56;BaseQRankSum=10.657;DP=454;FS=15.057;HRun=5;HaplotypeScore=102.6691;InbreedingCoeff=0.8634;MQ=57.80;MQ0=2;MQRankSum=-9.984;QD=24.86;ReadPosRankSum=0.323;VQSLOD=2.0557;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,10:9:21.07:301,21,0	0/0:8,0:8:24.08:0,24,296	0/0:16,0:11:30.09:0,30,372	0/0:27,0:26:19.66:0,20,500	1/1:4,8:11:21.07:300,21,0	0/0:14,0:14:39.08:0,39,466	0/0:21,0:21:60.19:0,60,742	0/0:17,0:15:36.10:0,36,434	0/0:28,0:28:84.23:0,84,1015	0/0:25,0:24:63.16:0,63,749	0/0:16,0:16:39.12:0,39,483	0/0:29,0:29:84.26:0,84,1041	0/0:15,0:15:39.10:0,39,467	0/0:18,0:18:48.15:0,48,595	0/0:24,0:24:60.19:0,60,733	0/0:18,0:18:48.08:0,48,595	0/0:15,0:15:43.38:0,43,521	0/0:11,0:11:33.10:0,33,408	1/1:0,6:5:15.05:215,15,0	1/1:1,12:13:36.12:510,36,0	1/1:0,4:4:5.73:85,6,0	0/0:27,0:27:72.18:0,72,863	0/0:26,0:26:72.23:0,72,889	0/0:15,0:15:45.14:0,45,557	0/0:15,0:14:36.11:0,36,443	0/1:6,8:11:16.09:237,0,16	1/1:1,5:4:9.03:129,9,0	1/1:0,4:3:9.03:128,9,0
chr10	44851915	.	AG	A	1437.13	PASS	AB=0.600;AC=13;AF=0.241;AN=54;BaseQRankSum=9.570;DP=456;FS=7.982;HRun=4;HaplotypeScore=96.0487;InbreedingCoeff=0.8345;MQ=54.69;MQ0=3;MQRankSum=-8.605;QD=21.77;ReadPosRankSum=0.187;VQSLOD=2.2758;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,9:10:24.07:287,24,0	0/0:10,0:10:30.07:0,30,383	0/0:19,0:10:26.97:0,27,337	0/0:26,0:17:45.10:0,45,558	1/1:0,13:12:27.08:322,27,0	0/0:20,0:20:54.18:0,54,756	0/0:12,1:13:0.44:0,0,426	0/0:21,0:21:57.19:0,57,797	0/0:25,0:25:75.25:0,75,1050	0/0:23,0:22:60.17:0,60,814	0/0:19,0:19:54.09:0,54,698	0/0:23,0:23:66.22:0,66,923	0/0:13,0:13:36.12:0,36,503	0/0:17,0:17:42.14:0,42,588	0/0:22,0:22:48.16:0,48,670	0/0:15,0:15:39.13:0,39,544	0/0:19,0:19:35.14:0,35,657	0/0:12,0:12:36.04:0,36,460	1/1:0,6:6:15.05:180,15,0	1/1:0,10:10:27.08:323,27,0	./.	0/0:27,0:27:75.24:0,75,1032	0/0:30,0:30:87.27:0,87,1184	0/0:14,0:14:39.13:0,39,546	0/0:20,0:19:51.17:0,51,712	0/1:4,8:11:95.42:221,0,95	1/1:0,9:6:15.05:179,15,0	1/1:1,5:5:9.03:108,9,0
chr10	44851953	.	GGA	G	587.65	PASS	AB=0.933;AC=12;AF=0.214;AN=56;BaseQRankSum=6.061;DP=393;FS=0.618;HRun=0;HaplotypeScore=90.9352;InbreedingCoeff=0.6036;MQ=64.60;MQ0=0;MQRankSum=-1.822;QD=5.44;ReadPosRankSum=0.595;VQSLOD=2.8262;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:6:17.96:0,18,216	0/0:8,0:8:24.07:0,24,406	0/0:16,0:16:38.55:0,39,563	0/0:15,0:15:26.84:0,27,603	0/0:9,0:6:12.04:0,12,213	0/0:15,0:15:45.15:0,45,912	0/0:12,0:12:36.05:0,36,656	1/1:7,1:8:11.82:88,12,0	0/0:17,0:17:51.18:0,51,1032	1/1:16,3:18:8.25:120,8,0	1/1:16,0:15:3.38:107,3,0	0/0:18,0:18:45.14:0,45,847	0/0:22,0:22:60.18:0,60,1140	0/0:18,0:18:48.16:0,48,969	1/1:20,3:23:6.97:196,7,0	1/1:12,2:14:1.51:141,2,0	0/0:24,0:24:72.19:0,72,1376	0/0:5,0:5:1.34:0,1,5	0/0:8,0:8:8.99:0,9,129	0/0:9,0:6:12.04:0,12,210	0/0:1,0:1:3.01:0,3,39	0/0:25,0:25:72.23:0,72,1389	0/0:29,0:29:81.16:0,81,1559	0/0:11,0:11:33.09:0,33,590	0/1:13,1:13:2.97:68,0,3	0/1:13,1:13:20:20,0,401	0/0:13,0:10:27.02:0,27,394	0/0:3,0:2:6.02:0,6,109
chr10	44851958	.	A	AAAG	5263.15	PASS	AB=0.777;AC=21;AF=0.375;AN=56;BaseQRankSum=12.015;DP=394;FS=0.000;HRun=0;HaplotypeScore=80.8493;InbreedingCoeff=0.6162;MQ=63.24;MQ0=0;MQRankSum=-8.689;QD=34.63;ReadPosRankSum=2.172;VQSLOD=5.3854;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,0:6:14.61:124,15,0	0/0:8,0:8:20.95:0,21,330	0/0:14,0:14:35.18:0,35,450	0/0:16,0:15:14.69:0,15,524	0/1:6,0:6:28.06:28,0,72	0/0:18,0:18:51.14:0,51,795	0/0:12,0:12:36.06:0,36,515	0/1:7,0:7:0.13:0,0,5	0/0:20,0:20:60.18:0,60,917	1/1:4,15:19:54.13:1043,54,0	1/1:1,10:10:27.09:582,27,0	0/0:18,0:18:48.15:0,48,744	0/0:22,0:22:57.19:0,57,921	0/0:20,0:20:54.16:0,54,843	1/1:6,18:24:57.06:1046,57,0	1/1:2,11:13:33.07:632,33,0	0/0:24,0:23:66.23:0,66,1089	1/1:1,5:7:21.05:389,21,0	0/0:4,0:5:6:0,6,70	0/1:5,0:8:37.80:38,0,81	0/0:2,0:1:2.97:0,3,20	0/0:24,0:24:69.23:0,69,1114	0/0:28,0:28:81.26:0,81,1291	0/0:11,0:11:27.08:0,27,415	1/1:3,12:14:39.10:800,39,0	0/1:9,0:13:44.46:333,0,44	1/1:6,0:9:23.66:218,24,0	0/1:2,0:2:30.54:31,0,41
chr10	44852014	.	G	GAC	6094.47	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=11.873;DP=397;FS=2.482;HRun=0;HaplotypeScore=68.9744;InbreedingCoeff=0.9627;MQ=57.89;MQ0=0;MQRankSum=-10.934;QD=35.43;ReadPosRankSum=2.997;VQSLOD=7.0749;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,7:7:15.05:274,15,0	1/1:0,8:8:21.07:384,21,0	0/0:22,0:21:63.20:0,63,872	0/0:22,0:20:57.17:0,57,759	1/1:1,5:5:8.41:163,8,0	0/0:20,0:20:57.16:0,57,779	0/0:14,0:14:42.06:0,42,570	1/1:11,1:12:33.05:356,33,0	0/0:16,0:16:48.16:0,48,687	1/1:5,8:13:27.09:494,27,0	1/1:3,12:11:18.06:322,18,0	0/0:14,0:14:42.14:0,42,602	0/0:19,0:19:54.14:0,54,734	0/0:14,0:14:42.13:0,42,584	1/1:7,10:17:36.09:597,36,0	1/1:2,10:12:30.10:547,30,0	0/0:27,0:25:72.19:0,72,981	1/1:5,4:9:12.04:219,12,0	1/1:1,5:5:15.05:273,15,0	1/1:3,14:13:24.08:439,24,0	1/1:0,6:5:15.05:274,15,0	0/0:20,0:20:57.18:0,57,793	0/0:28,0:28:81.27:0,81,1159	0/0:8,0:8:24.08:0,24,344	1/1:1,14:13:27.09:492,27,0	1/1:2,10:12:33.11:601,33,0	1/1:1,10:11:30.10:548,30,0	1/1:1,3:4:6.02:110,6,0
chr10	44852016	.	CA	C	294.14	PASS	AB=1.000;AC=4;AF=0.071;AN=56;BaseQRankSum=4.157;DP=399;FS=6.698;HRun=2;HaplotypeScore=78.9627;InbreedingCoeff=0.4316;MQ=58.02;MQ0=1;MQRankSum=-5.326;QD=7.54;ReadPosRankSum=-3.431;VQSLOD=-0.4955;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:7:14.51:0,15,79	0/0:8,0:8:20.32:0,20,111	0/0:23,0:21:63.20:0,63,899	0/0:21,0:20:57.17:0,57,828	0/0:6,0:5:9.18:0,9,48	0/0:20,0:20:57.19:0,57,854	0/0:15,0:15:45.14:0,45,648	1/1:1,11:12:33:387,33,0	0/0:16,0:16:48.16:0,48,719	0/0:15,0:14:16.45:0,16,241	0/1:15,0:11:0.45:0,0,75	0/0:15,0:15:45.15:0,45,673	0/0:19,0:19:54.14:0,54,765	0/0:14,0:14:42.14:0,42,629	0/0:16,0:16:26.59:0,27,144	0/0:12,0:12:29:0,29,158	0/0:27,0:25:72.23:0,72,1047	0/0:8,0:8:11.61:0,12,64	0/0:6,0:5:14.62:0,15,108	0/0:15,0:12:23.22:0,23,127	0/0:7,0:5:14.51:0,15,80	0/0:21,0:21:60.20:0,60,898	0/0:28,0:28:84.24:0,84,1234	0/0:9,0:9:27.08:0,27,387	0/0:15,0:13:3.86:0,4,91	0/1:12,0:12:4.65:5,0,182	0/0:11,0:11:8.28:0,8,121	0/0:4,0:4:5.81:0,6,32
chr10	44852127	.	TAAAG	T	187.92	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.695;DP=418;FS=4.280;HRun=0;HaplotypeScore=68.7347;InbreedingCoeff=0.5083;MQ=48.47;MQ0=19;MQRankSum=-0.144;QD=31.32;ReadPosRankSum=1.378;VQSLOD=3.3526;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:4:9.03:0,9,198	1/1:0,6:6:15.05:276,15,0	0/0:4,0:1:3.01:0,3,79	0/0:5,0:3:6.02:0,6,155	0/0:14,0:12:15.05:0,15,395	0/0:25,0:25:60.20:0,60,1529	0/0:13,0:12:27.05:0,27,653	0/0:18,0:4:12.04:0,12,313	0/0:24,0:24:66.23:0,66,1732	0/0:14,0:14:42.14:0,42,1108	0/0:25,0:24:57.14:0,57,1421	0/0:18,0:18:48.16:0,48,1266	0/0:13,0:13:36.12:0,36,951	0/0:18,0:18:36.12:0,36,930	0/0:15,0:14:36.08:0,36,891	0/0:15,0:14:39.13:0,39,1022	0/0:35,0:34:84.29:0,84,2195	0/0:23,0:21:45.15:0,45,1166	0/0:8,0:2:6.02:0,6,158	0/0:21,0:20:30.05:0,30,730	0/0:12,0:7:8.94:0,9,119	0/0:22,0:22:48.15:0,48,1186	0/0:15,0:15:42.12:0,42,1038	0/0:13,0:13:30.10:0,30,791	0/0:12,0:11:21.07:0,21,555	0/0:8,0:5:15.05:0,15,396	0/0:7,0:2:3.01:0,3,86	0/0:7,0:6:6.02:0,6,139
chr10	44852141	.	CCCAT	C	340.84	PASS	AB=0.819;AC=6;AF=0.107;AN=56;BaseQRankSum=5.169;DP=430;FS=12.703;HRun=0;HaplotypeScore=77.4476;InbreedingCoeff=0.0925;MQ=52.74;MQ0=19;MQRankSum=-5.043;QD=5.24;ReadPosRankSum=-1.722;VQSLOD=0.4647;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:5,1:4:7.26:0,7,65	0/0:6,0:6:15.05:0,15,431	0/0:9,0:5:15.05:0,15,364	0/0:12,0:10:27.09:0,27,688	0/1:10,5:13:75.34:138,0,75	0/0:22,0:22:54.19:0,54,1565	0/0:12,0:12:33.11:0,33,955	0/0:22,0:9:24.08:0,24,695	0/0:24,0:24:69.24:0,69,2000	0/0:15,0:15:45.15:0,45,1233	0/0:24,0:23:60.21:0,60,1720	0/0:16,0:16:42.14:0,42,1217	0/0:14,0:14:39.13:0,39,1095	0/0:17,0:17:36.12:0,36,1043	0/0:14,0:13:33.11:0,33,930	0/0:15,0:14:42.14:0,42,1167	0/0:37,0:37:96.33:0,96,2777	0/0:24,0:22:48:0,48,1376	0/1:9,0:2:10.10:10,0,21	0/1:15,8:20:99:110,0,194	1/1:6,1:5:1.79:59,2,0	0/0:17,0:17:48.16:0,48,1370	0/0:19,0:18:51.18:0,51,1476	0/0:12,0:12:30.10:0,30,869	0/0:16,0:15:33.11:0,33,942	0/1:8,3:7:72.40:140,0,72	0/0:6,0:1:3:0,3,28	0/0:6,0:5:6.01:0,6,57
chr10	44852142	.	C	CCA	880.49	PASS	AB=0.861;AC=15;AF=0.268;AN=56;BaseQRankSum=8.759;DP=427;FS=16.159;HRun=0;HaplotypeScore=64.4525;InbreedingCoeff=0.6422;MQ=52.82;MQ0=18;MQRankSum=-7.075;QD=9.68;ReadPosRankSum=0.228;VQSLOD=1.8684;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,3:4:9.03:124,9,0	0/0:6,0:6:15.05:0,15,221	0/0:10,0:6:14.98:0,15,170	0/1:11,1:10:45.74:46,0,321	0/1:10,5:13:2.02:159,0,2	0/0:22,0:22:54.18:0,54,795	0/0:12,0:12:33.11:0,33,485	0/0:23,0:10:24.08:0,24,353	0/0:24,0:24:69.23:0,69,1016	0/0:15,0:15:45.13:0,45,612	0/0:23,0:22:60.19:0,60,863	0/0:16,0:16:42.14:0,42,618	0/0:14,0:14:39.13:0,39,566	0/0:16,0:16:36.11:0,36,513	0/0:14,0:13:33.11:0,33,479	0/0:15,0:14:42.06:0,42,564	0/0:37,0:37:96.28:0,96,1388	0/0:24,0:22:48.15:0,48,687	1/1:8,1:2:5.81:56,6,0	1/1:11,12:20:13.05:383,13,0	1/1:7,0:5:2.60:92,3,0	0/0:18,0:18:48.15:0,48,688	0/0:19,0:18:51.16:0,51,733	0/0:12,0:12:30.10:0,30,442	0/0:16,0:15:33.09:0,33,448	0/1:9,1:6:8.55:63,0,9	1/1:3,3:1:3.01:41,3,0	1/1:1,2:3:6.02:84,6,0
chr10	44852143	.	CATAA	C	405.48	PASS	AB=0.895;AC=9;AF=0.161;AN=56;BaseQRankSum=5.948;DP=426;FS=10.580;HRun=0;HaplotypeScore=77.7860;InbreedingCoeff=0.2708;MQ=52.84;MQ0=18;MQRankSum=-5.617;QD=5.41;ReadPosRankSum=-1.973;VQSLOD=0.6937;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:6,0:4:25.68:26,0,48	0/0:6,0:6:15.05:0,15,405	0/0:10,0:6:18.06:0,18,397	0/0:12,0:10:27.09:0,27,673	0/1:11,4:13:86.34:137,0,86	0/0:21,0:21:54.19:0,54,1451	0/0:12,0:12:33.11:0,33,890	0/0:27,0:14:39.13:0,39,1051	0/0:23,0:23:69.24:0,69,1802	0/0:15,0:15:42.14:0,42,1092	0/0:23,0:22:60.21:0,60,1589	0/0:15,0:15:42.14:0,42,1134	0/0:15,0:15:42.10:0,42,1074	0/0:15,0:15:36.12:0,36,972	0/0:14,0:13:33.08:0,33,831	0/0:15,0:14:42.11:0,42,1067	0/0:38,0:38:99:0,102,2717	0/0:23,0:21:48.16:0,48,1295	1/1:5,4:2:5.51:65,6,0	0/1:20,2:19:99:108,0,197	1/1:5,2:5:6:59,6,0	0/0:18,0:18:51.18:0,51,1343	0/0:19,0:18:51.18:0,51,1376	0/0:12,0:12:30.10:0,30,807	0/0:15,0:14:33.11:0,33,861	0/1:7,3:6:11.42:143,0,11	0/1:6,0:2:4.21:4,0,21	0/0:3,0:3:6.01:0,6,57
chr10	44852145	.	T	TACAAGATGC	3757.93	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=9.092;DP=437;FS=22.964;HRun=0;HaplotypeScore=108.7753;InbreedingCoeff=0.9002;MQ=52.69;MQ0=18;MQRankSum=-8.166;QD=44.21;ReadPosRankSum=-0.652;VQSLOD=1.6361;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,3:5:12:417,12,0	0/0:6,0:6:15.05:0,15,474	0/0:10,0:6:18.06:0,18,445	0/0:13,0:11:27.09:0,27,740	1/1:10,5:13:20.81:723,21,0	0/0:20,0:20:54.19:0,54,1679	0/0:13,0:13:33.11:0,33,1025	0/0:29,0:16:42.10:0,42,981	0/0:23,0:23:69.24:0,69,2094	0/0:16,0:16:42.14:0,42,1247	0/0:25,0:24:63.20:0,63,1851	0/0:15,0:15:42.14:0,42,1320	0/0:14,0:14:42.10:0,42,1204	0/0:14,0:14:36.12:0,36,1121	0/0:14,0:13:33.08:0,33,961	0/0:15,0:14:42.11:0,42,1192	0/0:38,0:38:99:0,99,3034	0/0:22,0:20:48.16:0,48,1496	1/1:8,1:2:6.02:179,6,0	1/1:14,12:23:38.92:1450,39,0	1/1:7,0:5:1.13:60,1,0	0/0:18,0:18:51.18:0,51,1551	0/0:19,0:18:51.18:0,51,1582	0/0:13,0:13:30.10:0,30,930	0/0:15,0:14:33.11:0,33,979	1/1:9,1:6:15:466,15,0	1/1:5,3:4:9.01:195,9,0	1/1:1,2:3:6.02:269,6,0
chr10	44852243	.	CAAAG	C	2289.93	PASS	AB=0.634;AC=13;AF=0.250;AN=52;BaseQRankSum=4.379;DP=460;FS=2.023;HRun=0;HaplotypeScore=77.8445;InbreedingCoeff=0.8221;MQ=46.36;MQ0=42;MQRankSum=-3.856;QD=19.41;ReadPosRankSum=1.083;VQSLOD=3.4564;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:7:8.96:0,9,174	0/0:9,0:9:27.08:0,27,624	./.	./.	0/0:21,0:15:39.13:0,39,992	0/0:10,0:10:24.07:0,24,522	0/0:11,0:10:24.07:0,24,573	1/1:16,3:4:9.03:152,9,0	0/0:24,0:24:57.20:0,57,1441	1/1:6,16:21:39.11:649,39,0	1/1:4,8:11:15.05:272,15,0	0/0:16,0:16:42.14:0,42,1081	0/0:19,0:18:48.15:0,48,1199	0/0:22,0:22:48.15:0,48,1148	1/1:2,8:9:12.04:218,12,0	1/1:1,15:11:20.99:344,21,0	0/0:27,0:26:69.21:0,69,1697	0/1:11,15:22:68.06:454,0,68	0/0:16,0:5:12.04:0,12,314	0/0:21,0:17:39.13:0,39,983	0/0:7,0:7:3.01:0,3,78	0/0:20,0:20:48.16:0,48,1256	0/0:26,0:26:69.22:0,69,1704	0/0:21,0:21:45.14:0,45,1098	1/1:0,13:11:21.07:381,21,0	0/0:18,0:13:36.12:0,36,912	0/0:14,0:12:27.09:0,27,697	0/0:6,0:5:15.05:0,15,347
chr10	44852272	.	G	GA	1359.93	PASS	AC=14;AF=0.269;AN=52;BaseQRankSum=2.665;DP=416;FS=59.461;HRun=3;HaplotypeScore=46.6122;InbreedingCoeff=0.8795;MQ=46.16;MQ0=29;MQRankSum=-7.477;QD=16.19;ReadPosRankSum=1.246;VQSLOD=-0.0225;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,4:3:3.01:42,3,0	0/0:9,0:9:24.07:0,24,288	0/0:8,0:1:2.98:0,3,22	./.	1/1:4,12:13:30.10:408,30,0	0/0:15,0:15:36.11:0,36,431	0/0:14,0:13:36.10:0,36,419	0/0:19,0:13:36.07:0,36,397	0/0:19,0:19:45.11:0,45,516	0/0:19,0:18:51.16:0,51,607	0/0:13,0:13:21:0,21,233	0/0:16,0:16:39.10:0,39,448	0/0:16,0:15:45.13:0,45,529	0/0:15,0:15:33.09:0,33,384	0/0:11,0:10:17.98:0,18,186	0/0:15,0:10:24.07:0,24,287	0/0:25,1:25:59.83:0,60,683	0/0:26,0:23:12.85:0,13,554	1/1:3,10:8:20.99:239,21,0	1/1:5,13:13:30.06:388,30,0	1/1:4,1:5:3.01:42,3,0	0/0:18,0:18:48.03:0,48,562	0/0:24,0:24:63.09:0,63,734	0/0:16,0:16:33.10:0,33,395	0/0:16,0:15:30.02:0,30,337	1/1:2,9:6:9.03:125,9,0	1/1:0,15:12:21.07:293,21,0	./.
chr10	44852460	.	CA	C	2601.92	PASS	AB=0.520;AC=13;AF=0.250;AN=52;BaseQRankSum=2.948;DP=589;FS=2.724;HRun=4;HaplotypeScore=96.7776;InbreedingCoeff=0.8916;MQ=49.70;MQ0=26;MQRankSum=-0.332;QD=22.63;ReadPosRankSum=2.041;VQSLOD=2.6200;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:24:36.12:0,36,501	0/0:11,0:11:33.07:0,33,440	./.	./.	0/0:26,0:22:51.17:0,51,711	0/0:26,0:26:75.23:0,75,1017	0/0:18,0:15:39.07:0,39,503	1/1:2,8:7:21.06:251,21,0	0/0:26,0:26:75.23:0,75,1016	1/1:2,22:21:54.12:637,54,0	1/1:1,20:19:42.13:503,42,0	0/0:18,0:18:45.14:0,45,611	0/0:21,0:21:57.19:0,57,797	0/0:18,0:18:48.13:0,48,650	1/1:0,7:7:12.04:144,12,0	0/1:1,12:11:17.94:228,0,18	0/0:41,0:42:99:0,120,1640	1/1:3,18:21:28.18:520,28,0	0/0:21,0:14:36.12:0,36,504	0/0:31,0:24:54.17:0,54,740	0/0:18,0:18:45.15:0,45,623	0/0:25,0:25:75.23:0,75,1019	0/0:24,0:24:66.22:0,66,923	0/0:20,0:20:60.15:0,60,801	1/1:1,18:19:42.13:504,42,0	0/0:18,0:15:39.13:0,39,541	0/0:35,0:29:69.11:0,69,942	0/0:17,0:16:36.12:0,36,502
chr10	44852601	.	CCAAA	C	5040.60	PASS	AB=0.764;AC=14;AF=0.250;AN=56;BaseQRankSum=7.642;DP=537;FS=11.748;HRun=0;HaplotypeScore=140.9938;InbreedingCoeff=0.7970;MQ=50.91;MQ0=1;MQRankSum=-10.598;QD=36.00;ReadPosRankSum=2.324;VQSLOD=4.8346;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:66.01:0,66,1114	0/0:8,0:8:24.08:0,24,591	0/0:26,0:15:42.10:0,42,930	0/0:17,0:15:30.10:0,30,752	0/0:20,0:19:42.03:0,42,698	0/0:22,0:22:51.18:0,51,1329	0/0:13,0:13:36.12:0,36,935	1/1:5,10:14:30.06:511,30,0	0/0:17,0:17:51.18:0,51,1336	1/1:1,29:27:78.27:1417,78,0	1/1:7,25:30:78.15:1303,78,0	0/0:12,0:12:36.06:0,36,774	0/0:20,0:20:60.21:0,60,1511	0/0:18,0:18:51.18:0,51,1329	1/1:3,11:14:33.11:600,33,0	0/1:4,5:9:54.56:298,0,55	0/0:24,0:24:69.23:0,69,1705	1/1:1,3:4:9.03:164,9,0	0/0:17,0:14:39.13:0,39,683	0/0:29,0:29:63.17:0,63,1198	0/0:23,0:23:51.17:0,51,947	0/0:19,0:19:45.14:0,45,1110	0/0:24,0:24:72.25:0,72,1876	0/0:19,0:19:54.09:0,54,1364	1/1:1,12:13:35.95:654,36,0	0/1:20,3:23:94.32:94,0,1023	0/0:30,0:29:60.87:0,61,1156	0/0:10,0:10:27.09:0,27,525
chr10	44852624	.	T	TAAC	7122.79	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=3.029;DP=550;FS=6.174;HRun=0;HaplotypeScore=126.4957;InbreedingCoeff=0.7341;MQ=59.10;MQ0=1;MQRankSum=-0.136;QD=29.19;ReadPosRankSum=-2.179;VQSLOD=4.2748;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,21:24:48.16:1020,48,0	0/0:8,0:8:24.08:0,24,385	0/0:32,0:21:48:0,48,631	0/0:19,0:16:41.60:0,42,576	1/1:3,22:24:54.18:1101,54,0	0/0:17,0:17:48.15:0,48,728	0/0:13,0:13:39.12:0,39,602	0/1:27,0:24:4.68:35,0,5	0/0:18,0:18:51.16:0,51,793	0/1:33,0:30:29.43:68,0,29	0/0:28,0:25:20.07:0,20,102	0/0:10,0:10:30.09:0,30,459	0/0:22,0:22:60.20:0,60,964	0/0:15,0:15:42.14:0,42,675	0/0:13,0:13:18.42:0,18,56	0/1:9,0:9:7.65:8,0,55	0/0:23,0:23:57.19:0,57,915	0/0:6,0:6:2.84:0,3,8	1/1:3,12:16:36.08:695,36,0	1/1:5,18:24:36.12:778,36,0	1/1:3,16:19:42.14:883,42,0	0/0:20,0:20:54.18:0,54,846	0/0:30,0:30:84.26:0,84,1281	0/0:15,0:15:39.09:0,39,577	0/0:17,0:16:0.83:0,1,32	1/1:4,18:23:38.98:1118,39,0	1/1:4,27:29:51.17:1092,51,0	1/1:0,6:10:15.05:325,15,0
chr10	44852627	.	CA	C	2758.03	PASS	AB=0.736;AC=14;AF=0.250;AN=56;BaseQRankSum=10.765;DP=543;FS=7.649;HRun=7;HaplotypeScore=117.9509;InbreedingCoeff=0.8203;MQ=59.52;MQ0=1;MQRankSum=-10.522;QD=18.14;ReadPosRankSum=-1.341;VQSLOD=2.2180;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:23:50.28:0,50,321	0/0:8,0:8:24.08:0,24,302	0/0:28,0:20:48.13:0,48,575	0/0:17,0:15:42.08:0,42,489	0/0:23,0:22:53.40:0,53,366	0/0:17,0:17:42.13:0,42,528	0/0:15,0:15:45.14:0,45,565	1/1:5,22:24:63.13:642,63,0	0/0:19,0:19:54.17:0,54,678	1/1:7,26:30:69.13:702,69,0	1/1:2,22:21:51.11:519,51,0	0/0:10,0:10:30.10:0,30,377	0/0:21,0:21:60.19:0,60,755	0/0:16,0:16:45.14:0,45,566	1/1:0,13:13:39.09:398,39,0	0/1:2,8:10:16.70:162,0,17	0/0:25,0:25:65.02:0,65,797	1/1:3,4:7:12.02:122,12,0	0/0:17,0:16:38.20:0,38,285	0/0:24,0:24:34.83:0,35,188	0/0:20,0:20:46.81:0,47,311	0/0:20,0:20:54.17:0,54,679	0/0:29,0:29:81.25:0,81,1006	0/0:15,0:15:35.32:0,35,425	1/1:2,14:15:39.09:397,39,0	0/1:20,2:22:5.73:6,0,231	0/0:31,0:28:52.42:0,52,313	0/0:10,0:10:14.48:0,14,78
chr10	44853001	.	TA	T	2783.30	PASS	AB=0.944;AC=32;AF=0.571;AN=56;BaseQRankSum=16.311;DP=496;FS=15.775;HRun=10;HaplotypeScore=115.5956;InbreedingCoeff=0.8350;MQ=57.62;MQ0=1;MQRankSum=-9.483;QD=10.62;ReadPosRankSum=0.997;VQSLOD=1.3262;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,0:18:26.48:78,26,0	0/0:7,0:7:17.17:0,17,90	0/1:14,2:16:22.57:23,0,274	0/1:7,0:7:14.49:14,0,27	1/1:5,0:16:18.33:54,18,0	0/0:22,1:23:31.10:0,31,571	0/0:20,0:20:57.14:0,57,621	1/1:9,19:28:54.43:469,54,0	0/0:24,0:24:43.30:0,43,704	1/1:4,15:19:47.99:416,48,0	1/1:4,14:18:32.98:286,33,0	0/0:20,0:20:51.08:0,51,529	0/0:18,0:18:48.13:0,48,531	0/0:19,1:20:31.11:0,31,571	1/1:1,17:18:50.99:442,51,0	1/1:2,11:13:32.99:286,33,0	0/0:24,3:28:57.13:0,57,621	1/1:2,13:14:32.98:286,33,0	1/1:3,0:11:16.29:48,16,0	1/1:3,0:25:40.73:119,41,0	1/1:3,0:10:14.26:42,14,0	0/0:24,0:24:72.15:0,72,783	0/0:28,0:30:74.96:0,75,779	0/0:20,0:20:57.14:0,57,622	1/1:2,11:13:32.99:286,33,0	1/1:3,1:15:23.37:86,23,0	1/1:6,0:16:18.32:54,18,0	1/1:1,0:4:6.11:18,6,0
chr10	44853011	.	A	AAAAC	598.83	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=5.309;DP=492;FS=7.550;HRun=0;HaplotypeScore=153.2608;InbreedingCoeff=0.1420;MQ=56.41;MQ0=4;MQRankSum=1.030;QD=3.89;ReadPosRankSum=-2.897;VQSLOD=1.1644;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:19.72:0,20,63	1/1:0,6:8:14.72:401,15,0	0/0:19,0:17:33.25:0,33,604	0/1:6,0:5:0.08:0,0,41	0/1:14,0:14:12.14:12,0,31	0/0:23,0:23:67.70:0,68,1041	0/0:21,0:21:60.18:0,60,1009	0/0:25,0:21:3.69:0,4,40	0/0:26,0:26:57.05:0,57,1202	0/0:15,0:16:4.75:0,5,27	0/1:17,0:17:27.70:34,0,28	0/0:24,0:24:60.99:0,61,876	0/0:20,0:20:60.11:0,60,923	0/0:25,0:25:75.15:0,75,1140	0/1:21,0:21:38.66:72,0,39	1/1:17,0:17:6.12:132,6,0	0/0:24,0:24:60.12:0,60,1006	0/1:13,0:12:1.25:1,0,24	0/0:9,0:8:13.59:0,14,41	0/1:24,0:24:16.18:16,0,69	0/1:9,0:9:9.97:10,0,12	0/0:25,0:25:75.16:0,75,1248	0/0:28,0:28:47.15:0,47,1184	0/0:21,0:21:60.17:0,60,999	0/1:14,0:14:6.88:62,0,7	0/0:12,0:12:15.81:0,16,48	0/1:11,0:11:0.52:1,0,35	0/0:4,0:4:2.89:0,3,7
chr10	44853070	.	A	ACC	3221.92	PASS	AB=0.883;AC=18;AF=0.321;AN=56;BaseQRankSum=10.108;DP=565;FS=0.449;HRun=2;HaplotypeScore=132.7954;InbreedingCoeff=0.7959;MQ=63.09;MQ0=2;MQRankSum=-5.163;QD=18.73;ReadPosRankSum=-0.942;VQSLOD=0.9508;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,6:12:17.93:219,18,0	0/0:14,0:14:29.94:0,30,413	0/1:18,0:19:20.70:21,0,603	0/1:29,0:27:77.50:78,0,639	1/1:2,24:23:39.13:685,39,0	0/0:28,0:28:84.28:0,84,1234	0/0:24,0:24:72.23:0,72,1037	0/0:26,0:24:58.90:0,59,382	0/0:22,0:22:66.21:0,66,951	0/0:14,0:14:38.01:0,38,257	0/0:22,0:21:52.54:0,53,309	0/0:25,0:25:66.22:0,66,971	0/0:15,0:15:42.13:0,42,599	0/0:28,0:28:78.25:0,78,1127	0/0:22,0:22:35.78:0,36,306	0/0:20,0:20:12.52:0,13,237	0/0:22,0:21:18.86:0,19,836	0/0:22,0:21:24.67:0,25,259	1/1:0,4:4:4.91:104,5,0	1/1:6,21:27:48.12:811,48,0	1/1:2,6:8:15.05:266,15,0	0/0:24,0:24:69.23:0,69,1016	0/0:30,0:30:90.27:0,90,1284	0/0:23,0:24:66.21:0,66,951	0/0:11,0:9:26.30:0,26,159	1/1:3,8:11:27.09:457,27,0	1/1:3,20:22:36.12:625,36,0	1/1:3,4:7:9.03:159,9,0
chr10	44853112	.	CAG	C	498.43	PASS	AC=2;AF=0.037;AN=54;BaseQRankSum=0.215;DP=533;FS=3.463;HRun=0;HaplotypeScore=98.4399;InbreedingCoeff=0.7864;MQ=49.94;MQ0=18;MQRankSum=-5.323;QD=20.77;ReadPosRankSum=-2.959;VQSLOD=3.2221;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:21.07:0,21,365	0/0:8,0:8:21.07:0,21,382	0/0:19,0:1:3.01:0,3,55	./.	0/0:27,0:24:54.19:0,54,988	0/0:23,0:23:66.23:0,66,1209	0/0:21,0:21:63.22:0,63,1148	1/1:4,20:24:45.07:593,45,0	0/0:19,0:19:54.17:0,54,959	0/0:19,0:19:48.16:0,48,841	0/0:21,0:20:54.19:0,54,989	0/0:25,0:25:75.23:0,75,1306	0/0:18,0:18:48.16:0,48,872	0/0:20,0:20:51.16:0,51,899	0/0:17,0:17:48.15:0,48,849	0/0:11,0:11:33.11:0,33,604	0/0:29,0:28:78.24:0,78,1370	0/0:27,0:26:61.16:0,61,1252	0/0:6,0:5:8.82:0,9,123	0/0:22,0:22:42.14:0,42,764	0/0:11,0:10:15.05:0,15,274	0/0:17,0:17:45.13:0,45,744	0/0:29,0:29:84.22:0,84,1398	0/0:21,0:21:60.17:0,60,1037	0/0:17,0:15:39.13:0,39,715	0/0:16,0:16:45.15:0,45,825	0/0:28,0:27:57.14:0,57,991	0/0:8,0:8:18.06:0,18,329
chr10	44853189	.	C	CAGA	7482.10	PASS	AB=0.941;AC=17;AF=0.304;AN=56;BaseQRankSum=11.307;DP=550;FS=13.935;HRun=0;HaplotypeScore=107.9665;InbreedingCoeff=0.9476;MQ=57.85;MQ0=0;MQRankSum=-7.119;QD=47.36;ReadPosRankSum=3.527;VQSLOD=6.3987;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,11:13:36.12:776,36,0	0/0:7,0:7:21.07:0,21,343	0/0:27,0:23:60.81:0,61,906	0/0:13,0:13:36.09:0,36,535	1/1:5,16:21:51.17:1100,51,0	0/0:15,0:15:45.15:0,45,735	0/1:15,0:16:0.43:0,0,680	0/0:26,0:24:66.19:0,66,1007	0/0:28,0:28:84.27:0,84,1345	0/0:35,0:29:78.25:0,78,1255	0/0:21,0:22:60.19:0,60,960	0/0:22,0:22:60.20:0,60,980	0/0:19,0:19:45.15:0,45,735	0/0:25,0:25:75.22:0,75,1170	0/0:14,0:14:39.13:0,39,638	0/0:12,0:12:36.12:0,36,589	0/0:27,0:25:63.09:0,63,972	0/0:16,0:16:39.13:0,39,637	1/1:0,6:5:12.02:224,12,0	1/1:3,33:35:92.69:2072,93,0	1/1:2,10:12:18.06:402,18,0	0/0:21,0:21:63.22:0,63,1026	0/0:24,0:24:69.20:0,69,1073	0/0:19,0:19:54.10:0,54,824	0/0:20,0:20:48.16:0,48,788	1/1:1,17:18:48.13:985,48,0	1/1:6,19:24:60.17:1278,60,0	1/1:1,10:11:30.10:645,30,0
chr10	44853247	.	TTAAAG	T	3832.16	PASS	AB=0.909;AC=15;AF=0.268;AN=56;BaseQRankSum=3.714;DP=441;FS=22.572;HRun=0;HaplotypeScore=151.4652;InbreedingCoeff=0.8876;MQ=67.29;MQ0=1;MQRankSum=-7.195;QD=43.55;ReadPosRankSum=1.872;VQSLOD=2.2443;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,2:5:15.04:232,15,0	0/0:11,0:11:27.34:0,27,467	0/0:15,0:11:33.11:0,33,767	0/0:12,0:12:33.50:0,34,569	1/1:9,3:12:33.02:532,33,0	0/0:20,0:20:36.11:0,36,773	0/0:11,0:11:33.06:0,33,725	0/0:24,0:23:63.16:0,63,791	0/0:20,0:20:48.16:0,48,1112	0/0:26,0:22:63.01:0,63,840	0/0:31,0:29:74.22:0,74,1017	0/0:14,0:14:30.09:0,30,690	0/0:10,0:10:24.07:0,24,565	0/0:17,0:17:30.09:0,30,627	0/0:16,0:16:44.32:0,44,669	0/0:12,0:12:33.03:0,33,409	0/0:19,0:18:57.17:0,57,1423	0/0:5,0:5:14.91:0,15,131	1/1:0,13:13:39.11:710,39,0	1/1:19,6:24:68.98:1048,69,0	1/1:7,0:7:9.79:169,10,0	0/0:23,0:23:66.23:0,66,1658	0/0:25,0:25:62.88:0,63,1540	0/0:23,0:23:48.04:0,48,974	0/0:18,0:17:51.12:0,51,670	0/1:9,1:10:34.84:424,0,35	1/1:10,1:11:33.11:548,33,0	1/1:4,1:5:11.97:169,12,0
chr10	44853251	.	AG	A	2212.85	PASS	AB=1.000;AC=18;AF=0.321;AN=56;BaseQRankSum=2.890;DP=438;FS=25.052;HRun=2;HaplotypeScore=123.3387;InbreedingCoeff=0.7988;MQ=66.03;MQ0=1;MQRankSum=-7.174;QD=18.29;ReadPosRankSum=0.649;VQSLOD=2.2488;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,2:6:5.84:97,6,0	0/0:11,0:11:29.33:0,29,175	0/0:14,0:10:30.10:0,30,422	0/0:12,0:11:28.76:0,29,326	1/1:3,8:11:30.06:357,30,0	0/1:26,0:26:91.01:91,0,291	0/1:12,0:12:6.47:6,0,327	0/0:24,0:23:52.47:0,52,252	0/0:19,0:19:48.07:0,48,612	0/0:25,0:21:52.99:0,53,269	0/0:29,0:27:69.78:0,70,431	0/0:14,0:14:27.02:0,27,336	0/0:11,0:11:21.02:0,21,258	0/0:16,0:16:27:0,27,297	0/0:15,0:15:40.90:0,41,257	0/0:11,0:11:29.29:0,29,186	0/0:20,0:19:46.32:0,46,691	0/0:4,0:4:8.86:0,9,58	1/1:13,0:13:36.05:414,36,0	1/1:8,14:21:50.41:594,50,0	1/1:1,5:6:11.07:121,11,0	0/0:25,0:25:68.71:0,69,897	0/0:27,0:27:46.14:0,46,717	0/0:23,0:23:40.28:0,40,495	0/0:17,0:16:42.80:0,43,231	1/1:3,6:9:10.72:240,11,0	1/1:1,10:11:33.09:410,33,0	1/1:2,3:5:8.97:82,9,0
chr10	44853257	.	G	GA	3894.87	PASS	AB=0.889;AC=15;AF=0.268;AN=56;BaseQRankSum=4.017;DP=432;FS=10.853;HRun=3;HaplotypeScore=117.9098;InbreedingCoeff=0.8657;MQ=62.80;MQ0=1;MQRankSum=-0.869;QD=32.19;ReadPosRankSum=0.569;VQSLOD=2.1611;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:6:10.97:0,11,110	0/0:11,0:11:30.02:0,30,329	0/0:11,0:7:18.01:0,18,196	0/0:10,0:10:12.02:0,12,141	0/0:11,0:11:26.96:0,27,270	0/0:26,0:26:37.76:0,38,399	0/0:12,0:12:23.74:0,24,334	1/1:2,19:20:51.13:661,51,0	0/0:20,0:20:34.17:0,34,415	1/1:4,18:20:57.15:759,57,0	1/1:6,23:27:72.14:929,72,0	0/0:17,0:17:18.71:0,19,248	0/0:11,0:11:12.82:0,13,138	0/0:15,0:15:11.35:0,11,144	1/1:2,14:16:45.11:586,45,0	1/1:0,8:8:24.08:323,24,0	0/0:19,0:18:39.70:0,40,450	1/1:0,3:3:9.03:123,9,0	0/0:12,0:12:33.52:0,34,353	0/0:20,0:19:41.31:0,41,483	0/0:6,0:6:14.07:0,14,139	0/0:26,0:26:46.77:0,47,552	0/0:37,0:37:46.68:0,47,565	0/0:23,0:23:23.05:0,23,286	1/1:1,13:13:36.12:496,36,0	0/1:7,1:8:17.83:18,0,209	0/0:11,0:11:30.04:0,30,329	0/0:6,0:6:11.99:0,12,122
chr10	44853287	.	AAGAAAGAGAGAGAGAGAG	A	7144.19	PASS	AB=0.978;AC=29;AF=0.518;AN=56;BaseQRankSum=5.663;DP=404;FS=26.559;HRun=0;HaplotypeScore=200.5825;InbreedingCoeff=0.5318;MQ=50.44;MQ0=18;MQRankSum=-8.427;QD=33.23;ReadPosRankSum=-2.061;VQSLOD=2.1615;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,2:6:11.32:372,11,0	1/1:9,2:11:21.07:697,21,0	0/0:5,0:4:5.91:0,6,54	0/0:12,0:6:18.06:0,18,764	1/1:10,3:11:9.50:397,10,0	0/0:25,0:25:48.16:0,48,3188	0/0:8,0:8:5.55:0,6,1021	1/1:5,0:3:9.03:194,9,0	0/0:16,0:16:27.09:0,27,1444	1/1:18,0:14:10.24:359,10,0	1/1:27,0:24:7.98:271,8,0	0/0:15,0:15:27.09:0,27,1775	0/0:14,0:14:30.10:0,30,1583	0/0:17,0:17:22.39:0,22,1280	0/1:13,0:13:13.97:310,0,14	1/1:8,0:8:6.17:236,6,0	0/0:21,0:19:2.62:0,3,2143	0/1:2,0:2:8.70:10,0,9	1/1:17,2:12:25.01:823,25,0	1/1:17,4:20:45.08:1427,45,0	1/1:2,0:2:2.97:20,3,0	0/1:21,0:21:27.75:28,0,2387	0/0:33,0:33:37.26:0,37,3499	0/0:23,0:23:29.89:0,30,1425	0/1:17,0:14:10.47:600,0,10	1/1:8,1:7:18.94:564,19,0	1/1:12,1:11:21.06:606,21,0	0/1:7,1:5:99:231,0,209
chr10	44853291	.	AAGAGAGAGAGAGAG	A	9115.18	PASS	AB=1.000;AC=30;AF=0.536;AN=56;BaseQRankSum=5.709;DP=412;FS=27.042;HRun=0;HaplotypeScore=172.2496;InbreedingCoeff=0.6456;MQ=55.87;MQ0=18;MQRankSum=-9.011;QD=43.20;ReadPosRankSum=-1.643;VQSLOD=2.8287;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:7,0:5:11.54:328,12,0	1/1:11,0:11:21.05:629,21,0	0/0:7,0:5:8.95:0,9,82	0/0:16,0:10:27.41:0,27,824	1/1:11,0:9:9.03:340,9,0	0/0:27,0:27:54.19:0,54,2825	0/0:9,0:9:4.86:0,5,809	1/1:5,0:3:9.03:194,9,0	0/0:15,0:15:27.09:0,27,1245	1/1:19,0:14:42.13:918,42,0	1/1:20,8:25:48.62:948,49,0	0/0:16,0:16:30.10:0,30,1617	0/0:15,0:15:33.11:0,33,1484	0/0:17,0:17:21.73:0,22,1126	1/1:12,0:12:36.11:724,36,0	1/1:9,0:9:24.55:624,25,0	0/0:23,0:21:7.98:0,8,2047	0/1:2,0:2:7.66:61,0,8	1/1:19,0:13:28.02:879,28,0	1/1:20,0:19:45.08:1323,45,0	1/1:2,0:2:2.98:22,3,0	0/1:22,0:22:24.74:25,0,2111	0/0:33,0:34:39.84:0,40,3031	0/0:22,0:22:29.89:0,30,1253	0/1:15,0:12:10.60:800,0,11	1/1:9,0:7:18.94:536,19,0	1/1:12,0:10:20.79:562,21,0	0/1:8,0:5:99:204,0,155
chr10	44853293	.	G	GAAAGAA	3667.71	PASS	AB=0.977;AC=30;AF=0.536;AN=56;BaseQRankSum=3.853;DP=401;FS=14.692;HRun=0;HaplotypeScore=147.3485;InbreedingCoeff=-0.5877;MQ=57.66;MQ0=17;MQRankSum=-2.379;QD=9.40;ReadPosRankSum=-2.025;VQSLOD=1.1638;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:5,0:3:27.90:63,0,28	0/1:11,0:11:9.05:258,0,9	0/0:9,0:6:8.01:0,8,63	0/1:19,0:13:39.05:39,0,229	0/1:11,0:9:53.89:70,0,54	0/1:15,8:27:99:293,0,296	0/1:9,0:9:97.90:182,0,98	1/1:5,0:3:1.55:4,2,0	0/1:13,0:13:22.55:23,0,271	0/1:17,0:14:15.30:322,0,15	0/1:27,0:24:30.80:222,0,31	0/1:15,0:15:43.29:43,0,277	0/1:15,0:15:28.65:29,0,290	0/1:17,0:17:26.48:26,0,241	1/1:12,0:12:7.17:271,7,0	0/1:9,0:9:12.56:94,0,13	0/1:24,0:22:99:119,0,401	0/0:2,0:2:2.70:0,3,7	0/1:15,0:12:41.26:239,0,41	0/1:19,0:18:29.07:377,0,29	0/1:1,0:1:0:0,0,0	0/1:21,0:21:99:102,0,381	0/1:33,0:33:99:202,0,383	0/1:20,0:20:48.62:49,0,237	0/1:15,0:12:15.54:234,0,16	1/1:8,0:6:11.68:167,12,0	1/1:10,0:8:20.20:217,20,0	0/1:8,0:5:22.10:22,0,57
chr10	44853294	.	AG	A	1129.38	PASS	AB=0.629;AC=25;AF=0.463;AN=54;BaseQRankSum=10.798;DP=386;FS=14.071;HRun=1;HaplotypeScore=115.8456;InbreedingCoeff=0.5830;MQ=59.27;MQ0=17;MQRankSum=-9.233;QD=6.68;ReadPosRankSum=1.149;VQSLOD=-0.4927;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,3:3:8.12:38,8,0	1/1:3,4:7:19.10:108,19,0	0/0:8,1:6:11.75:0,12,102	0/0:21,0:14:29.49:0,29,370	1/1:3,5:6:7.62:31,8,0	0/0:24,0:24:51.05:0,51,673	0/0:9,0:9:7.59:0,8,203	1/1:5,0:3:0.94:2,1,0	0/0:13,0:13:27.07:0,27,387	0/1:7,12:14:6.85:143,0,7	1/1:10,17:24:10.30:189,10,0	0/0:14,0:14:30.07:0,30,415	0/0:15,0:15:33.09:0,33,474	0/0:15,0:15:24.06:0,24,340	0/1:4,8:12:21.14:69,0,21	1/1:2,6:8:5.97:103,6,0	0/0:23,0:21:40.51:0,41,676	0/1:1,1:2:1.47:13,0,1	1/1:11,6:12:25.51:136,26,0	1/1:8,11:18:33.62:167,34,0	./.	0/0:20,0:20:8.14:0,8,541	0/0:33,0:33:58.05:0,58,708	0/0:20,0:20:33.08:0,33,439	0/1:2,13:12:20.68:98,0,21	1/1:2,6:6:17:97,17,0	1/1:3,6:7:20.44:121,20,0	0/1:5,3:5:9.66:10,0,27
chr10	44853323	.	GC	G	179.81	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.551;DP=463;FS=1.526;HRun=2;HaplotypeScore=119.4358;InbreedingCoeff=0.8676;MQ=60.45;MQ0=15;MQRankSum=-2.505;QD=22.48;ReadPosRankSum=1.661;VQSLOD=3.6107;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:10:21.07:0,21,312	1/1:0,8:8:20.89:272,21,0	0/0:21,0:15:37.70:0,38,497	0/0:24,0:18:41.77:0,42,545	0/0:15,0:13:27.09:0,27,399	0/0:26,0:26:77.61:0,78,1111	0/0:5,0:5:15.05:0,15,225	0/0:21,0:20:57.15:0,57,822	0/0:17,0:17:45.14:0,45,653	0/0:24,0:19:57.19:0,57,852	0/0:29,0:26:48.16:0,48,715	0/0:14,0:14:36.09:0,36,516	0/0:19,0:19:51.16:0,51,744	0/0:16,0:16:39.13:0,39,584	0/0:10,0:10:30.10:0,30,448	0/0:9,0:9:27.09:0,27,403	0/0:15,0:14:42.12:0,42,606	0/0:5,0:5:15.05:0,15,223	0/0:22,0:18:48.12:0,48,693	0/0:22,0:21:54.17:0,54,786	0/0:5,0:5:6.02:0,6,90	0/0:23,0:23:69.23:0,69,1032	0/0:32,0:32:81.25:0,81,1161	0/0:14,0:14:36.12:0,36,539	0/0:20,0:16:48.16:0,48,717	0/0:11,0:9:27.09:0,27,391	0/0:14,0:12:33.09:0,33,472	0/0:10,0:8:24.08:0,24,359
chr10	44853472	.	GAAGA	G	128.61	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=0.735;DP=501;FS=0.000;HRun=0;HaplotypeScore=116.4199;InbreedingCoeff=0.7351;MQ=48.62;MQ0=22;MQRankSum=-0.363;QD=25.72;ReadPosRankSum=-0.823;VQSLOD=3.3988;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:16:18.06:0,18,278	1/1:0,5:5:12.04:214,12,0	0/0:21,0:10:30.10:0,30,713	0/0:14,0:1:3.01:0,3,36	0/0:18,0:17:38.72:0,39,615	0/0:22,0:22:54.18:0,54,1371	0/0:10,0:10:27.09:0,27,615	0/0:29,0:24:54.17:0,54,872	0/0:28,0:28:84.29:0,84,2106	0/0:31,0:26:66.22:0,66,1143	0/0:17,0:15:23.43:0,23,450	0/0:18,0:18:45.15:0,45,1174	0/0:19,0:19:51.18:0,51,1331	0/0:18,0:18:45.14:0,45,1124	0/0:13,0:12:24.07:0,24,395	0/0:16,0:13:30.10:0,30,497	0/0:22,0:22:63.20:0,63,1551	0/0:9,0:9:24.08:0,24,408	0/0:16,0:14:23.60:0,24,360	0/0:22,0:22:36.12:0,36,583	0/0:14,0:14:21.05:0,21,282	0/0:18,0:18:48.16:0,48,1169	0/0:25,0:24:69.23:0,69,1716	0/0:19,0:19:48.16:0,48,1203	0/0:21,0:19:33.11:0,33,548	0/0:16,0:15:33.11:0,33,530	0/0:21,0:19:39.13:0,39,639	0/0:2,0:2:6.02:0,6,104
chr10	44853479	.	G	GAAA	8369.99	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=11.014;DP=470;FS=4.125;HRun=4;HaplotypeScore=77.5551;InbreedingCoeff=0.9640;MQ=49.30;MQ0=7;MQRankSum=-8.920;QD=33.89;ReadPosRankSum=-1.102;VQSLOD=2.2325;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:13:17.95:264,18,0	0/0:6,0:6:13.21:0,13,98	0/0:15,0:11:29.96:0,30,409	0/0:9,0:3:6.02:0,6,79	1/1:17,0:16:41.98:629,42,0	0/0:19,0:19:54.18:0,54,824	0/0:11,0:11:24.08:0,24,368	1/1:6,20:22:48:914,48,0	0/0:29,0:29:81.26:0,81,1219	1/1:1,30:27:72.12:1394,72,0	1/1:4,12:15:30.02:528,30,0	0/0:16,0:16:48.08:0,48,687	0/0:20,0:20:54.13:0,54,782	0/0:15,0:15:45.15:0,45,686	1/1:1,10:10:21.07:469,21,0	1/1:1,14:12:27.09:602,27,0	0/0:24,0:25:54.08:0,54,945	1/1:2,8:10:27.05:555,27,0	1/1:14,0:12:23.72:342,24,0	1/1:21,0:21:36.01:555,36,0	1/1:10,0:10:17.78:234,18,0	0/0:16,0:16:42.14:0,42,639	0/0:25,0:24:63:0,63,933	0/0:16,0:17:45.08:0,45,642	1/1:2,19:19:30.10:669,30,0	1/1:14,0:14:36.12:524,36,0	1/1:20,0:18:36.12:589,36,0	1/1:4,0:4:6.02:102,6,0
chr10	44853480	.	A	AAAG	8008.90	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=13.821;DP=477;FS=1.762;HRun=0;HaplotypeScore=81.2223;InbreedingCoeff=0.9385;MQ=49.33;MQ0=8;MQRankSum=-10.205;QD=32.04;ReadPosRankSum=0.490;VQSLOD=4.6687;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,13:13:18.06:377,18,0	0/0:6,0:6:14.60:0,15,125	0/0:14,0:11:30.08:0,30,459	0/0:10,0:3:9:0,9,100	1/1:0,17:16:42.14:884,42,0	0/0:19,0:19:54.18:0,54,911	0/0:12,0:12:27.08:0,27,436	1/1:26,0:22:45.12:676,45,0	0/0:31,0:31:81.28:0,81,1371	1/1:33,0:29:63.07:971,63,0	1/1:17,0:15:2.18:285,2,0	0/0:17,0:17:48.16:0,48,792	0/0:20,0:20:57.17:0,57,922	0/0:15,0:15:45.15:0,45,758	1/1:10,0:9:21.07:290,21,0	1/1:15,0:12:27.09:381,27,0	0/0:25,0:25:36.43:0,36,1059	1/1:10,0:10:24.07:337,24,0	1/1:4,13:14:26.75:518,27,0	1/1:2,19:21:39.13:810,39,0	1/1:1,9:10:18.06:341,18,0	0/0:17,0:17:42.14:0,42,707	0/0:24,0:23:66.21:0,66,1085	0/0:17,0:17:48.12:0,48,763	1/1:20,0:18:10.23:391,10,0	1/1:1,14:14:36.12:795,36,0	1/1:3,17:18:36.12:815,36,0	1/1:0,4:4:6.02:138,6,0
chr10	44853959	.	AC	A	325.08	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-0.245;DP=662;FS=11.712;HRun=1;HaplotypeScore=135.7426;InbreedingCoeff=0.9952;MQ=59.61;MQ0=11;MQRankSum=0.801;QD=29.55;ReadPosRankSum=-0.970;VQSLOD=1.8510;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:80.70:0,81,655	1/1:0,11:11:30.10:420,30,0	0/0:36,0:13:39.13:0,39,574	0/0:34,0:19:57.16:0,57,828	0/0:36,0:36:95.59:0,96,735	0/0:22,0:22:66.21:0,66,1004	0/0:19,0:19:57.19:0,57,889	0/0:24,0:18:48.03:0,48,685	0/0:17,0:17:51.17:0,51,798	0/0:30,0:29:84.29:0,84,1310	0/0:26,0:26:78.24:0,78,1195	0/0:23,0:23:69.20:0,69,1031	0/0:24,0:24:72.22:0,72,1081	0/0:21,0:21:63.21:0,63,984	0/0:17,0:17:48.12:0,48,690	0/0:21,0:21:63.21:0,63,983	0/0:22,0:22:66.22:0,66,1010	0/0:24,0:24:63.38:0,63,985	0/0:29,0:24:65.19:0,65,440	0/0:21,0:21:50.69:0,51,378	0/0:20,0:20:56.67:0,57,417	0/0:25,0:25:72.24:0,72,1121	0/0:21,0:21:57.16:0,57,845	0/0:21,0:21:63.17:0,63,933	0/0:22,0:21:60.17:0,60,937	0/0:29,0:29:77.04:0,77,592	0/0:26,0:26:65.69:0,66,497	0/0:8,0:8:20.88:0,21,156
chr10	44854281	.	A	AG	5629.90	PASS	AB=0.718;AC=14;AF=0.250;AN=56;BaseQRankSum=-14.593;DP=564;FS=0.366;HRun=0;HaplotypeScore=57.8199;InbreedingCoeff=0.8399;MQ=59.45;MQ0=2;MQRankSum=1.754;QD=34.54;ReadPosRankSum=1.857;VQSLOD=4.3981;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:86.80:0,87,1107	0/0:7,0:7:21.06:0,21,278	0/0:24,0:17:48.06:0,48,598	0/0:20,0:20:51.15:0,51,673	0/0:28,0:28:81.13:0,81,1046	0/0:23,0:23:69.21:0,69,933	0/0:12,0:12:30.10:0,30,418	1/1:0,32:30:87.26:1253,87,0	0/0:24,0:24:72.21:0,72,972	1/1:1,22:23:66.22:1005,66,0	1/1:0,26:26:78.03:1107,78,0	0/0:12,0:12:36.12:0,36,503	0/0:19,0:19:54.16:0,54,721	0/0:16,0:16:48.15:0,48,654	1/1:2,22:24:54.18:826,54,0	0/1:2,13:15:2.81:512,0,3	0/0:28,0:28:84.27:0,84,1156	1/1:2,11:13:17.22:443,17,0	0/0:20,0:17:54.17:0,54,740	0/0:26,0:26:78.21:0,78,1051	0/0:12,0:12:36.12:0,36,503	0/0:17,0:17:48.16:0,48,671	0/0:27,0:27:75.22:0,75,1014	0/0:15,0:15:42.14:0,42,587	1/1:1,11:12:16.73:443,17,0	0/1:16,2:18:40.66:41,0,564	0/0:31,0:31:90.26:0,90,1193	0/0:11,0:10:30.10:0,30,417
chr10	44854673	.	A	AATAAT	10613.29	PASS	AB=0.917;AC=19;AF=0.339;AN=56;BaseQRankSum=14.622;DP=512;FS=0.000;HRun=0;HaplotypeScore=114.0748;InbreedingCoeff=0.6617;MQ=64.59;MQ0=0;MQRankSum=-14.420;QD=44.97;ReadPosRankSum=-2.947;VQSLOD=3.7118;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,9:9:24.08:698,24,0	0/0:7,0:7:18.06:0,18,378	0/1:22,0:21:3.49:3,0,864	0/1:15,0:15:14.28:14,0,450	1/1:6,37:43:99:2993,108,0	0/0:25,0:25:66.17:0,66,1253	0/0:9,0:9:18.06:0,18,378	0/0:26,0:26:66.17:0,66,1258	0/0:17,0:17:48.15:0,48,936	0/0:32,0:32:87.30:0,87,1826	0/0:19,0:18:57.19:0,57,1134	0/1:20,0:20:26.32:26,0,1125	0/0:16,0:16:48.16:0,48,1008	0/0:19,0:19:54.17:0,54,1061	0/0:13,0:13:33.11:0,33,663	0/0:11,0:11:33.04:0,33,578	0/1:23,0:23:1.46:1,0,1115	0/0:19,0:19:42.06:0,42,730	1/1:8,3:10:21.06:527,21,0	1/1:6,19:25:72.24:2044,72,0	1/1:2,7:10:21.07:566,21,0	0/0:19,0:19:54.17:0,54,1083	0/0:17,0:17:48.16:0,48,972	0/0:15,0:15:45.13:0,45,835	0/0:12,0:12:27.08:0,27,495	0/1:6,15:20:8.73:1377,0,9	1/1:4,16:20:57.20:1710,57,0	1/1:4,11:13:24.01:653,24,0
chr10	44854754	.	T	TGAA	15485.61	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=8.412;DP=550;FS=1.111;HRun=0;HaplotypeScore=121.7095;InbreedingCoeff=0.9991;MQ=61.41;MQ0=6;MQRankSum=-6.046;QD=50.61;ReadPosRankSum=3.140;VQSLOD=6.5446;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,15:14:39.09:814,39,0	0/0:7,0:7:21.07:0,21,338	0/0:27,0:21:28.16:0,28,614	0/0:29,0:18:33.11:0,33,516	1/1:6,22:25:42.14:926,42,0	0/0:24,0:24:72.20:0,72,1087	0/0:11,0:11:30.10:0,30,482	1/1:5,14:16:36.12:769,36,0	0/0:23,0:23:63.21:0,63,1013	1/1:2,23:24:69.20:1476,69,0	1/1:4,17:20:51.13:1073,51,0	0/0:12,0:12:33.11:0,33,528	0/0:14,0:14:39.12:0,39,600	0/0:23,0:23:63.21:0,63,1011	1/1:1,12:13:33.11:726,33,0	1/1:1,14:15:39.13:860,39,0	0/0:16,0:16:36.12:0,36,578	1/1:2,19:21:45.15:987,45,0	1/1:7,10:15:36.12:782,36,0	1/1:4,26:32:78.18:1628,78,0	1/1:1,19:21:57.20:1258,57,0	0/0:22,0:22:63.20:0,63,989	0/0:19,0:19:54.18:0,54,867	0/0:16,0:16:48.08:0,48,704	1/1:3,14:17:45.15:991,45,0	1/1:5,13:18:39.13:860,39,0	1/1:4,23:27:69.19:1475,69,0	1/1:2,13:15:39.13:860,39,0
chr10	44854790	.	ATGAATTGGC	A	2665.93	PASS	AB=0.860;AC=7;AF=0.125;AN=56;BaseQRankSum=5.250;DP=522;FS=0.598;HRun=0;HaplotypeScore=225.3667;InbreedingCoeff=-0.1438;MQ=51.02;MQ0=8;MQRankSum=-7.968;QD=19.89;ReadPosRankSum=-5.559;VQSLOD=1.0923;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:12:28.31:0,28,1119	0/0:5,0:5:15.02:0,15,630	0/0:16,0:10:29.91:0,30,1127	0/0:13,0:10:23.76:0,24,956	0/0:22,0:20:24.82:0,25,977	0/0:29,0:29:87.27:0,87,4032	0/0:11,0:11:33.10:0,33,1518	0/1:15,10:23:99:936,0,187	0/0:16,0:16:48.16:0,48,2279	0/1:21,3:23:99:261,0,368	0/1:28,7:32:99:851,0,519	0/0:20,0:20:57.20:0,57,2880	0/0:15,0:15:45.14:0,45,1942	0/0:24,0:24:71.61:0,72,3431	0/1:7,1:8:77.16:77,0,215	0/1:10,0:10:60.51:61,0,252	0/0:14,0:14:42.14:0,42,2014	0/1:10,5:15:99:489,0,108	0/0:25,0:20:47.03:0,47,1417	0/0:39,0:39:66.75:0,67,2580	0/0:22,0:22:50.01:0,50,1946	0/0:21,0:21:60.21:0,60,2816	0/0:24,0:24:72.23:0,72,3436	0/0:13,0:13:39.11:0,39,1681	0/1:16,1:17:99:122,0,305	0/0:15,0:15:38.14:0,38,1322	0/0:20,0:20:54.15:0,54,2019	0/0:10,0:10:30.01:0,30,935
chr10	44854796	.	T	TTTA	4767.69	PASS	AB=0.752;AC=13;AF=0.232;AN=56;BaseQRankSum=14.123;DP=475;FS=0.000;HRun=0;HaplotypeScore=143.9230;InbreedingCoeff=0.6912;MQ=52.67;MQ0=8;MQRankSum=-13.137;QD=39.40;ReadPosRankSum=2.086;VQSLOD=5.3465;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:14:30.10:0,30,551	0/0:5,0:5:12.04:0,12,224	0/0:16,0:10:30.05:0,30,482	0/0:11,0:8:18.06:0,18,336	0/0:19,0:17:24.08:0,24,447	0/0:28,0:28:84.27:0,84,1534	0/0:10,0:10:30.10:0,30,559	1/1:10,8:18:40.37:600,40,0	0/0:15,0:15:45.15:0,45,833	1/1:4,17:20:46.45:967,46,0	1/1:7,22:28:79.18:1506,79,0	0/0:21,0:21:60.21:0,60,1118	0/0:15,0:15:45.14:0,45,808	0/0:25,0:25:72.23:0,72,1311	1/1:1,6:7:19.88:415,20,0	0/1:1,5:6:37.87:326,0,38	0/0:16,0:16:45.15:0,45,828	0/1:10,4:14:99:238,0,109	0/0:19,0:14:39.10:0,39,683	0/0:32,0:32:78:0,78,1217	0/0:19,0:19:45.15:0,45,839	0/0:23,0:23:60.20:0,60,1083	0/0:26,0:26:75.26:0,75,1387	0/0:11,0:11:33.11:0,33,599	1/1:1,10:11:32.14:690,32,0	0/1:13,1:14:26.10:26,0,619	0/0:19,0:19:51.11:0,51,912	0/0:8,0:8:24.04:0,24,411
chr10	44854799	.	C	CTCA	6346.64	PASS	AB=0.765;AC=13;AF=0.232;AN=56;BaseQRankSum=13.603;DP=488;FS=1.794;HRun=0;HaplotypeScore=144.6312;InbreedingCoeff=0.6923;MQ=52.16;MQ0=9;MQRankSum=-13.641;QD=45.01;ReadPosRankSum=-0.114;VQSLOD=6.4905;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:14:33.11:0,33,598	0/0:5,0:5:15.05:0,15,280	0/0:16,0:10:18.67:0,19,379	0/0:11,0:8:18.02:0,18,300	0/0:18,0:16:24.07:0,24,417	0/0:27,0:27:81.26:0,81,1471	0/0:10,0:10:30.10:0,30,552	1/1:24,8:30:86.80:1416,87,0	0/0:14,0:14:42.14:0,42,783	1/1:5,17:21:55.75:1180,56,0	1/1:12,23:32:86.60:1720,87,0	0/0:21,0:21:60.21:0,60,1118	0/0:16,0:16:45.15:0,45,838	0/0:24,0:24:72.23:0,72,1312	1/1:1,6:7:20.56:430,21,0	0/1:2,5:7:34.91:354,0,35	0/0:16,0:16:48.16:0,48,894	0/1:11,4:15:76.51:479,0,77	0/0:19,0:14:42.10:0,42,716	0/0:32,0:32:84.26:0,84,1507	0/0:17,0:17:45.15:0,45,839	0/0:22,0:22:63.17:0,63,1137	0/0:27,0:27:81.26:0,81,1451	0/0:11,0:11:33.11:0,33,615	1/1:1,10:11:33.10:731,33,0	0/1:11,1:12:35.21:35,0,577	0/0:19,0:19:51.13:0,51,914	0/0:7,0:7:21.07:0,21,391
chr10	44855028	.	TTA	T	6911.04	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=11.580;DP=434;FS=26.126;HRun=0;HaplotypeScore=83.4926;InbreedingCoeff=0.9063;MQ=58.71;MQ0=6;MQRankSum=-2.630;QD=38.39;ReadPosRankSum=2.013;VQSLOD=3.9305;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,25:26:75.10:1149,75,0	0/1:7,0:7:2.79:3,0,116	0/0:11,0:5:15.05:0,15,268	0/0:10,0:5:9.50:0,10,157	1/1:0,23:23:60.03:876,60,0	0/0:13,0:13:36.09:0,36,605	0/0:5,0:5:11.78:0,12,193	0/0:9,0:5:15.05:0,15,194	0/0:20,0:20:60.17:0,60,1084	0/0:16,0:14:37.33:0,37,435	0/0:13,0:12:32.63:0,33,350	0/0:14,0:14:42.14:0,42,822	0/0:15,0:15:45.14:0,45,839	0/0:20,0:20:60.17:0,60,1117	0/0:12,0:12:29.97:0,30,349	0/0:3,0:3:6.01:0,6,66	0/0:27,0:27:81.25:0,81,1526	0/0:8,0:8:17.96:0,18,197	1/1:1,17:16:48.13:721,48,0	1/1:0,28:28:80.99:1131,81,0	1/1:0,13:13:33.11:535,33,0	0/0:20,0:20:60.20:0,60,1155	0/0:17,0:17:51.18:0,51,1032	0/0:14,0:14:42.13:0,42,814	0/0:6,0:6:17.92:0,18,215	1/1:0,24:22:66.18:1043,66,0	1/1:0,24:24:54.07:814,54,0	1/1:0,16:16:45.01:640,45,0
chr10	44855029	.	T	TAAA	2064.16	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=-3.137;DP=439;FS=30.155;HRun=8;HaplotypeScore=109.8836;InbreedingCoeff=0.8586;MQ=58.59;MQ0=7;MQRankSum=-3.088;QD=27.16;ReadPosRankSum=-2.851;VQSLOD=-0.3356;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:26:74.30:0,74,519	0/1:7,0:7:11.30:11,0,100	0/0:12,0:5:14.96:0,15,172	0/0:11,0:7:11.20:0,11,125	0/0:23,0:23:50.47:0,50,346	0/0:14,0:14:27.06:0,27,354	0/0:4,0:5:11.97:0,12,136	1/1:3,0:7:17.94:139,18,0	0/0:21,0:21:51.13:0,51,654	1/1:4,11:14:33.09:609,33,0	1/1:1,10:10:21.07:421,21,0	0/0:14,0:14:42.14:0,42,552	0/0:15,0:15:39.12:0,39,512	0/0:20,0:20:54.17:0,54,709	1/1:2,8:13:24.07:430,24,0	1/1:1,2:3:3.01:61,3,0	0/0:27,0:27:69.20:0,69,907	1/1:4,5:8:12.04:242,12,0	0/0:18,0:16:41.62:0,42,285	0/0:28,0:28:68.30:0,68,467	0/0:13,0:13:32.74:0,33,226	0/0:20,0:20:57.17:0,57,749	0/0:17,0:17:51.14:0,51,653	0/0:14,0:14:39.08:0,39,493	1/1:0,6:6:18.06:342,18,0	0/0:24,0:21:62.49:0,62,433	0/0:24,0:24:50.39:0,50,341	0/0:16,0:16:41.64:0,42,302
chr10	44855158	.	AG	A	2622.56	PASS	AB=1.000;AC=26;AF=0.464;AN=56;BaseQRankSum=15.698;DP=475;FS=119.187;HRun=2;HaplotypeScore=93.7880;InbreedingCoeff=0.7140;MQ=65.03;MQ0=0;MQRankSum=-5.222;QD=10.01;ReadPosRankSum=2.876;VQSLOD=0.2179;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:29:21.70:104,22,0	0/0:5,0:5:14.99:0,15,127	0/0:21,0:21:26.67:0,27,538	0/0:12,0:12:25.96:0,26,341	1/1:23,0:23:7.71:59,8,0	0/0:16,0:16:45.13:0,45,635	0/0:15,0:15:42.13:0,42,607	1/1:0,12:11:30.10:388,30,0	0/0:15,0:15:42.11:0,42,587	1/1:0,11:11:30.06:366,30,0	1/1:0,15:15:36.12:461,36,0	0/0:18,0:18:54.17:0,54,780	0/0:19,0:19:57.18:0,57,832	0/0:23,0:23:69.18:0,69,949	1/1:0,8:8:24.08:311,24,0	1/1:0,8:8:18.06:233,18,0	0/0:18,0:18:50.09:0,50,758	1/1:0,11:11:33.11:426,33,0	0/1:26,0:26:0.17:27,0,0	1/1:28,0:28:32.50:171,33,0	0/1:23,0:23:22.42:32,0,22	0/0:18,0:18:51.17:0,51,762	0/0:19,0:19:57.16:0,57,809	0/0:14,0:14:39.13:0,39,582	1/1:0,4:4:12:137,12,0	0/1:24,0:23:13.35:13,0,29	1/1:32,0:32:3.04:87,3,0	0/1:8,0:8:11.66:19,0,12
chr10	44855160	.	GA	G	5612.38	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=15.614;DP=476;FS=21.376;HRun=8;HaplotypeScore=83.8672;InbreedingCoeff=0.9795;MQ=65.12;MQ0=0;MQRankSum=-3.196;QD=21.59;ReadPosRankSum=1.437;VQSLOD=3.5573;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,24:29:77.68:723,78,0	0/0:1,0:5:11.50:0,12,58	0/0:20,0:20:36.54:0,37,398	0/0:12,0:12:15.04:0,15,178	1/1:1,21:22:60.03:568,60,0	0/0:18,0:18:45.12:0,45,522	0/0:14,0:15:39.10:0,39,459	1/1:12,0:11:27.79:129,28,0	0/0:13,0:13:36.11:0,36,435	1/1:11,0:11:24.49:117,24,0	1/1:15,0:15:34.64:202,35,0	0/0:18,0:18:51.16:0,51,616	0/0:20,0:20:57.16:0,57,668	0/0:25,0:25:63.13:0,63,703	1/1:8,0:8:21.84:97,22,0	1/1:8,0:8:16.14:66,16,0	0/0:18,0:19:31.81:0,32,591	1/1:11,0:11:31.40:164,31,0	1/1:1,25:26:75.12:724,75,0	1/1:1,26:27:78.13:752,78,0	1/1:2,21:23:54.08:521,54,0	0/0:17,0:17:51.15:0,51,606	0/0:19,0:19:54.15:0,54,639	0/0:15,0:15:45.09:0,45,517	1/1:4,0:4:8.03:33,8,0	1/1:2,22:23:60.04:561,60,0	1/1:2,30:32:81.13:782,81,0	1/1:1,7:8:18.03:174,18,0
chr10	44855175	.	A	ATT	141.11	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-1.329;DP=465;FS=0.000;HRun=6;HaplotypeScore=110.3666;InbreedingCoeff=0.8964;MQ=67.68;MQ0=0;MQRankSum=-0.786;QD=23.52;ReadPosRankSum=-1.486;VQSLOD=1.8045;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:28:77.97:0,78,927	1/1:2,4:6:15.04:229,15,0	0/0:17,0:15:26.80:0,27,286	0/0:11,0:11:18.52:0,19,171	0/0:22,0:22:54.16:0,54,659	0/0:16,0:16:42.13:0,42,512	0/0:14,0:15:36.10:0,36,427	0/0:17,0:16:39.12:0,39,476	0/0:17,0:17:48.15:0,48,585	0/0:10,0:10:30.09:0,30,366	0/0:11,0:11:27.08:0,27,329	0/0:19,0:19:54.17:0,54,659	0/0:16,0:16:48.15:0,48,585	0/0:20,0:20:54.17:0,54,658	0/0:8,0:8:24.06:0,24,281	0/0:5,0:5:15.03:0,15,171	0/0:27,0:27:78.22:0,78,937	0/0:9,0:9:18.05:0,18,220	0/0:29,0:29:72.22:0,72,877	0/0:24,0:24:66.20:0,66,802	0/0:26,0:26:60.19:0,60,732	0/0:16,0:16:48.13:0,48,573	0/0:19,0:19:57.18:0,57,695	0/0:14,0:15:44.86:0,45,511	0/0:3,0:3:9.03:0,9,110	0/0:21,0:20:51.15:0,51,622	0/0:29,0:29:81.25:0,81,988	0/0:9,0:9:24.08:0,24,293
chr10	44855346	.	TG	T	4245.96	PASS	AB=0.538;AC=15;AF=0.268;AN=56;BaseQRankSum=14.963;DP=430;FS=16.867;HRun=3;HaplotypeScore=77.5513;InbreedingCoeff=0.8325;MQ=54.15;MQ0=10;MQRankSum=1.380;QD=31.45;ReadPosRankSum=0.682;VQSLOD=3.1516;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,26:27:54.25:905,54,0	0/0:2,0:2:6.02:0,6,86	0/0:25,0:8:24.02:0,24,297	0/0:23,0:10:24.08:0,24,338	1/1:0,15:15:36.11:446,36,0	0/0:18,0:18:51.17:0,51,735	0/0:14,0:14:42.12:0,42,584	0/0:23,0:17:51.17:0,51,729	0/0:22,0:22:66.21:0,66,932	0/0:6,0:6:18.06:0,18,259	0/0:1,0:1:3.01:0,3,43	0/0:18,0:18:54.18:0,54,777	0/0:11,0:11:33.11:0,33,475	0/0:19,0:19:57.19:0,57,821	0/0:9,0:9:24.08:0,24,345	0/0:9,0:9:27.09:0,27,388	0/0:35,0:35:93.31:0,93,1339	0/0:23,0:23:66.22:0,66,949	1/1:1,16:15:45.14:558,45,0	1/1:0,17:17:42.13:520,42,0	1/1:1,23:22:54.17:669,54,0	0/0:9,0:9:27.09:0,27,389	0/0:8,0:8:24.08:0,24,346	0/0:19,0:19:57.19:0,57,818	0/0:1,0:1:3.01:0,3,43	0/1:2,12:14:44.22:404,0,44	1/1:1,12:13:36.11:446,36,0	1/1:0,8:8:24.08:297,24,0
chr10	44855642	.	T	TA	2216.07	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=9.888;DP=222;FS=6.547;HRun=5;HaplotypeScore=42.6062;InbreedingCoeff=0.8955;MQ=57.52;MQ0=2;MQRankSum=-3.152;QD=31.66;ReadPosRankSum=0.802;VQSLOD=3.9341;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,9:9:24.08:316,24,0	0/0:4,0:4:12.03:0,12,129	0/0:14,0:11:27.01:0,27,263	0/0:9,0:7:3.20:0,3,117	1/1:0,5:4:9.03:118,9,0	0/0:2,0:2:6.02:0,6,64	0/0:6,0:6:18.05:0,18,193	0/0:8,0:8:24.06:0,24,258	0/0:4,0:4:12.02:0,12,121	0/0:8,0:8:21.05:0,21,221	0/0:6,0:6:14.99:0,15,142	0/0:3,0:3:9.02:0,9,97	0/0:10,0:10:30.08:0,30,322	0/0:8,0:8:24.05:0,24,250	0/0:7,0:7:21.04:0,21,218	0/0:4,0:4:9.02:0,9,97	0/0:10,0:10:24.06:0,24,258	0/0:10,0:10:24.06:0,24,258	1/1:2,9:12:30.09:384,30,0	1/1:0,12:12:36.12:473,36,0	1/1:0,9:9:24.04:296,24,0	0/0:16,0:16:48.12:0,48,516	0/0:13,0:13:36.04:0,36,371	0/0:6,0:6:17.96:0,18,178	0/0:4,0:4:12.03:0,12,129	1/1:0,5:4:12.04:158,12,0	1/1:0,12:12:36.12:474,36,0	1/1:1,5:6:15.05:197,15,0
chr10	44856138	.	T	TAC	8418.49	PASS	AB=0.520;AC=15;AF=0.268;AN=56;BaseQRankSum=13.533;DP=539;FS=1.585;HRun=0;HaplotypeScore=104.1356;InbreedingCoeff=0.9073;MQ=60.89;MQ0=0;MQRankSum=-4.885;QD=53.62;ReadPosRankSum=4.628;VQSLOD=5.5758;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,20:20:48.16:940,48,0	0/0:10,0:10:30.10:0,30,488	0/0:9,0:9:23.87:0,24,253	0/0:14,0:13:31.32:0,31,413	1/1:0,25:25:72.25:1407,72,0	0/0:30,0:30:84.27:0,84,1346	0/0:19,0:19:51.15:0,51,806	0/0:18,0:18:48.16:0,48,781	0/0:13,0:13:39.13:0,39,637	0/0:27,0:27:81.27:0,81,1302	0/0:29,0:29:81.26:0,81,1320	0/0:25,0:25:75.26:0,75,1224	0/0:17,0:17:51.17:0,51,832	0/0:24,0:24:72.25:0,72,1173	0/0:20,0:20:60.20:0,60,979	0/0:11,0:11:33.10:0,33,515	0/0:19,0:19:57.19:0,57,930	0/0:19,0:19:54.18:0,54,881	1/1:0,10:10:30.10:593,30,0	1/1:1,30:32:90.29:1733,90,0	1/1:0,7:7:18.06:355,18,0	0/0:27,0:27:78.27:0,78,1273	0/0:23,0:23:54.18:0,54,881	0/0:12,0:12:36.12:0,36,577	0/0:16,0:16:48.15:0,48,760	0/1:2,23:26:22.32:1291,0,22	1/1:1,22:24:69.24:1330,69,0	1/1:0,13:13:39.13:768,39,0
chr10	44856195	.	A	AAAAAC	8204.08	PASS	AB=0.741;AC=15;AF=0.268;AN=56;BaseQRankSum=9.264;DP=578;FS=2.309;HRun=0;HaplotypeScore=161.0737;InbreedingCoeff=0.9291;MQ=62.61;MQ0=0;MQRankSum=-14.501;QD=47.15;ReadPosRankSum=-3.013;VQSLOD=4.6618;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:13,7:20:2.43:593,0,2	0/0:10,0:10:24.06:0,24,429	0/0:25,0:22:38.94:0,39,652	0/0:22,0:18:25.99:0,26,416	1/1:17,19:34:74.98:1703,75,0	0/0:27,0:27:69.22:0,69,1311	0/0:15,0:15:36.11:0,36,667	0/0:25,0:25:54.61:0,55,677	0/0:20,0:20:54.19:0,54,1051	0/0:28,0:28:62.98:0,63,787	0/0:17,0:17:24.13:0,24,536	0/0:23,0:23:66.21:0,66,1265	0/0:20,0:20:51.17:0,51,947	0/0:27,0:27:78.24:0,78,1479	0/0:14,0:14:27.05:0,27,303	0/0:13,0:13:33.09:0,33,404	0/0:18,0:18:34.82:0,35,757	0/0:13,0:13:10.08:0,10,309	1/1:11,3:13:18.91:396,19,0	1/1:12,14:26:52.57:1368,53,0	1/1:5,6:11:18.06:440,18,0	0/0:33,0:33:87.27:0,87,1640	0/0:33,0:33:87.16:0,87,1588	0/0:13,0:13:36.09:0,36,631	0/0:8,0:8:18.06:0,18,226	1/1:14,18:32:31.76:1713,32,0	1/1:4,18:23:54.19:1502,54,0	1/1:9,3:12:20.35:489,20,0
chr10	44856257	.	GTA	G	4832.99	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=4.205;DP=582;FS=5.365;HRun=0;HaplotypeScore=105.4525;InbreedingCoeff=0.9983;MQ=57.49;MQ0=0;MQRankSum=2.893;QD=38.06;ReadPosRankSum=2.905;VQSLOD=6.7355;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:71.27:0,71,1354	0/0:7,0:7:21.07:0,21,385	0/0:21,0:15:42.14:0,42,762	0/0:22,0:17:42.14:0,42,770	0/0:36,0:35:90.28:0,90,1610	0/0:32,0:32:96.31:0,96,1718	0/0:13,0:13:39.11:0,39,662	1/1:2,24:25:60.20:859,60,0	0/0:18,0:18:48.15:0,48,849	1/1:1,27:28:81.27:1159,81,0	1/1:1,19:20:57.19:816,57,0	0/0:23,0:23:69.24:0,69,1264	0/0:17,0:17:48.15:0,48,849	0/0:24,0:24:72.21:0,72,1243	1/1:1,15:16:36.12:515,36,0	1/1:0,8:8:24.08:344,24,0	0/0:25,0:25:69.21:0,69,1183	1/1:1,17:18:31.83:668,32,0	0/0:17,0:16:39.13:0,39,714	0/0:24,0:24:60.21:0,60,1088	0/0:25,0:25:57.17:0,57,1011	0/0:21,0:21:60.19:0,60,1070	0/0:20,0:20:54.19:0,54,989	0/0:20,0:20:57.15:0,57,980	1/1:0,11:11:33.11:473,33,0	0/0:32,1:32:50.32:0,50,1531	0/0:19,0:19:57.18:0,57,989	0/0:9,0:8:24.08:0,24,439
chr10	44856664	.	AC	A	8473.41	PASS	AB=1.000;AC=31;AF=0.554;AN=56;BaseQRankSum=15.773;DP=540;FS=0.000;HRun=5;HaplotypeScore=101.5199;InbreedingCoeff=0.9487;MQ=56.18;MQ0=1;MQRankSum=-5.407;QD=26.81;ReadPosRankSum=0.708;VQSLOD=4.1320;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,25:28:63.18:714,63,0	0/0:8,0:8:24.08:0,24,324	0/0:15,0:13:18.39:0,18,312	0/1:13,0:13:0.95:1,0,240	1/1:4,19:23:45.07:510,45,0	0/0:23,0:23:66.21:0,66,885	0/0:27,0:27:78.26:0,78,1066	1/1:2,23:23:60.08:642,60,0	0/0:25,0:25:72.24:0,72,981	1/1:1,22:23:66.15:727,66,0	1/1:0,20:20:51.14:578,51,0	0/0:22,0:22:66.21:0,66,886	0/0:12,0:12:33.11:0,33,451	0/0:20,0:20:60.20:0,60,811	1/1:0,16:16:45.13:510,45,0	1/1:0,12:12:33.09:374,33,0	0/0:18,0:18:48.16:0,48,654	1/1:2,17:19:45.13:510,45,0	1/1:1,18:18:48.14:544,48,0	1/1:1,20:21:54.15:612,54,0	1/1:1,30:31:81.18:902,81,0	0/0:18,0:18:51.17:0,51,697	0/0:19,0:19:57.18:0,57,762	0/0:16,1:17:8.26:0,8,499	1/1:4,12:16:36.10:408,36,0	1/1:2,18:19:54.14:601,54,0	1/1:4,19:23:54.13:601,54,0	1/1:0,7:7:21.06:238,21,0
chr10	44856797	.	AAGG	A	6350.35	PASS	AB=0.527;AC=15;AF=0.268;AN=56;BaseQRankSum=10.190;DP=520;FS=2.192;HRun=0;HaplotypeScore=112.7066;InbreedingCoeff=0.8989;MQ=53.78;MQ0=5;MQRankSum=-2.897;QD=38.72;ReadPosRankSum=3.349;VQSLOD=6.0501;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,26:29:19.16:1068,19,0	0/0:6,0:6:18.05:0,18,371	0/0:17,0:10:30.10:0,30,600	0/0:22,0:21:57.20:0,57,1230	1/1:2,21:23:57.16:941,57,0	0/0:18,0:18:51.15:0,51,1070	0/0:19,0:19:54.19:0,54,1242	0/0:19,0:18:54.07:0,54,743	0/0:19,0:19:57.17:0,57,1203	0/0:23,0:23:69.23:0,69,953	0/0:15,0:15:45.15:0,45,684	0/0:19,0:19:54.17:0,54,1195	0/0:16,0:16:45.14:0,45,994	0/0:19,0:19:54.17:0,54,1199	0/0:14,0:14:39.03:0,39,578	0/0:5,0:5:15.05:0,15,221	0/0:31,0:31:93.32:0,93,2116	0/0:17,0:17:48.16:0,48,726	1/1:1,13:11:30.10:511,30,0	1/1:0,11:11:30.10:509,30,0	1/1:1,29:30:60.16:992,60,0	0/0:16,0:16:45.15:0,45,974	0/0:13,0:13:30.10:0,30,686	0/0:30,0:30:87.30:0,87,1987	0/0:18,0:18:54.18:0,54,808	0/1:3,26:29:11.73:1052,0,12	1/1:0,24:24:66.23:1124,66,0	1/1:0,4:4:9.03:153,9,0
chr10	44856993	.	TA	T	3208.22	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=0.131;DP=440;FS=11.591;HRun=6;HaplotypeScore=69.4710;InbreedingCoeff=0.9126;MQ=61.65;MQ0=0;MQRankSum=1.023;QD=25.46;ReadPosRankSum=1.237;VQSLOD=3.2311;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:28:81.32:0,81,1031	0/0:10,0:10:30.10:0,30,394	0/0:11,0:8:24.08:0,24,313	0/0:9,1:9:18.06:0,18,233	0/0:26,0:26:65.18:0,65,801	0/0:21,0:21:60.20:0,60,789	0/0:17,0:17:51.17:0,51,670	1/1:4,21:24:63.14:668,63,0	0/0:17,0:17:48.16:0,48,632	1/1:3,19:22:60.13:634,60,0	1/1:1,26:27:75.19:806,75,0	0/0:6,0:6:18.06:0,18,237	0/0:15,0:15:42.11:0,42,523	0/0:20,0:20:51.16:0,51,658	1/1:0,10:10:24.06:258,24,0	1/1:2,10:12:30.07:322,30,0	0/0:14,0:14:36.12:0,36,474	1/1:1,9:10:27.07:290,27,0	0/0:19,0:19:51.64:0,52,669	0/0:11,0:11:22.01:0,22,279	0/0:10,0:10:27.05:0,27,336	0/0:16,0:16:48.15:0,48,625	0/0:23,0:23:63.20:0,63,816	0/1:4,0:4:9.47:9,0,106	1/1:1,15:16:39.10:419,39,0	0/0:14,0:14:41.67:0,42,490	0/0:16,0:16:40.52:0,41,584	0/0:9,0:9:21.07:0,21,276
chr10	44857733	.	AG	A	6409.62	PASS	AB=0.548;AC=15;AF=0.268;AN=56;BaseQRankSum=14.242;DP=464;FS=2.090;HRun=1;HaplotypeScore=82.4210;InbreedingCoeff=0.8948;MQ=77.25;MQ0=0;MQRankSum=-3.907;QD=38.85;ReadPosRankSum=-1.017;VQSLOD=4.9703;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,15:15:39.13:545,39,0	0/0:7,0:7:21.07:0,21,331	0/0:12,0:12:24.12:0,24,501	0/0:11,0:11:15.26:0,15,277	1/1:0,29:29:84.28:1172,84,0	0/0:17,0:17:51.17:0,51,814	0/0:16,0:16:48.16:0,48,767	0/0:23,0:23:69.24:0,69,1102	0/0:18,0:18:54.18:0,54,863	0/0:24,0:24:72.25:0,72,1149	0/0:28,0:28:84.26:0,84,1296	0/0:14,0:14:42.14:0,42,669	0/0:11,0:11:33.11:0,33,527	0/0:12,0:12:36.12:0,36,573	0/0:12,0:12:36.12:0,36,575	0/0:11,0:11:33.11:0,33,527	0/0:11,0:11:30.10:0,30,470	0/0:21,0:21:60.17:0,60,948	1/1:0,28:28:81.22:1076,81,0	1/1:1,23:24:72.23:990,72,0	1/1:0,12:12:30.10:418,30,0	0/0:7,0:7:21.07:0,21,336	0/0:23,0:23:69.24:0,69,1102	0/0:3,0:3:9.01:0,9,120	0/0:18,0:18:54.18:0,54,863	0/1:3,14:17:44.78:577,0,45	1/1:0,24:24:72.24:1004,72,0	1/1:0,16:16:45.15:628,45,0
chr10	44857930	.	G	GA	4351.14	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=3.161;DP=457;FS=2.717;HRun=8;HaplotypeScore=73.3656;InbreedingCoeff=0.9891;MQ=73.38;MQ0=1;MQRankSum=-5.895;QD=17.83;ReadPosRankSum=4.232;VQSLOD=4.9692;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:13:23.24:122,23,0	0/0:6,0:6:18.01:0,18,165	0/0:13,0:13:26.95:0,27,232	0/0:9,0:9:18.01:0,18,164	1/1:34,0:34:74.67:383,75,0	0/0:20,0:20:51.02:0,51,467	0/0:17,0:17:45.02:0,45,412	0/0:27,0:26:72.02:0,72,653	0/0:17,0:17:45.02:0,45,412	1/1:2,23:25:69.19:786,69,0	1/1:2,14:16:39.12:450,39,0	0/0:20,0:20:48.02:0,48,439	0/0:14,0:14:39:0,39,352	0/0:21,0:21:54.02:0,54,494	1/1:0,12:12:36.11:415,36,0	1/1:0,11:11:33.10:381,33,0	0/0:8,0:8:23.98:0,24,212	1/1:3,8:11:21.06:242,21,0	1/1:16,0:16:29.81:154,30,0	1/1:28,0:26:45.45:224,45,0	1/1:9,0:9:11.93:68,12,0	0/0:16,0:16:45.02:0,45,412	0/0:19,0:19:57.03:0,57,522	0/0:6,0:6:15.01:0,15,137	1/1:1,17:18:48.14:554,48,0	1/1:24,0:24:56.57:276,57,0	1/1:19,0:19:39.77:197,40,0	1/1:8,0:8:19.89:98,20,0
chr10	44857936	.	A	AAAAG	9102.76	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-1.316;DP=462;FS=0.000;HRun=0;HaplotypeScore=84.8986;InbreedingCoeff=0.9932;MQ=74.03;MQ0=1;MQRankSum=-7.728;QD=57.61;ReadPosRankSum=0.506;VQSLOD=5.7037;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,12:13:27.09:702,27,0	0/0:6,0:6:18.06:0,18,318	0/0:12,0:12:26.05:0,26,447	0/0:10,0:10:18.05:0,18,307	1/1:1,32:34:93.08:2067,93,0	0/0:19,0:19:54.17:0,54,929	0/0:17,0:17:51.14:0,51,818	0/0:30,0:30:84.25:0,84,1382	0/0:15,0:15:45.15:0,45,792	0/0:24,0:24:38.06:0,38,243	0/0:16,0:16:45.24:0,45,237	0/0:18,0:18:51.15:0,51,848	0/0:14,0:14:39.11:0,39,662	0/0:19,0:19:54.18:0,54,955	0/0:12,0:12:33.57:0,34,151	0/0:11,0:11:30.78:0,31,139	0/0:9,0:9:27.08:0,27,438	0/0:11,0:11:19.37:0,19,88	1/1:14,8:22:63.07:1157,63,0	1/1:4,21:23:57.14:1336,57,0	1/1:0,9:9:24:461,24,0	0/0:16,0:16:45.15:0,45,790	0/0:21,0:21:60.20:0,60,1030	0/0:6,0:6:17.98:0,18,280	0/0:18,0:18:47.77:0,48,229	1/1:2,22:24:66.19:1637,66,0	1/1:3,18:23:48.16:1197,48,0	1/1:0,8:8:21.07:546,21,0
chr10	44858149	.	TA	T	2572.16	PASS	AB=0.667;AC=15;AF=0.268;AN=56;BaseQRankSum=13.997;DP=394;FS=11.374;HRun=8;HaplotypeScore=78.0146;InbreedingCoeff=0.8904;MQ=71.61;MQ0=0;MQRankSum=-12.392;QD=20.41;ReadPosRankSum=2.108;VQSLOD=3.2995;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:4,4:8:1.90:119,0,2	0/0:1,0:13:31.63:0,32,161	0/0:11,1:12:15.16:0,15,265	0/0:4,0:4:12.03:0,12,137	1/1:1,23:24:39.05:376,39,0	0/0:16,0:16:48.15:0,48,580	0/0:9,0:9:27.08:0,27,326	0/0:22,0:22:57.15:0,57,660	0/0:22,0:22:63.19:0,63,757	0/0:24,0:24:72.21:0,72,860	0/0:21,0:21:54.16:0,54,638	0/0:15,0:15:42.13:0,42,507	0/0:19,0:19:51.15:0,51,606	0/0:16,0:16:48.14:0,48,566	0/0:9,0:9:18.04:0,18,206	0/0:8,0:8:21.06:0,21,254	0/0:13,0:13:24.07:0,24,290	0/0:4,0:4:9.03:0,9,109	1/1:5,15:20:45.07:435,45,0	1/1:2,11:13:33.05:318,33,0	1/1:0,2:2:3:29,3,0	0/0:9,0:9:21.06:0,21,254	0/0:18,0:18:54.07:0,54,623	0/0:7,0:7:21.06:0,21,254	0/0:7,0:7:18.06:0,18,217	1/1:2,17:19:17.84:456,18,0	1/1:1,20:21:57.04:541,57,0	1/1:2,17:19:51.08:492,51,0
chr10	44858171	.	CA	C	5111.37	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=15.266;DP=389;FS=13.144;HRun=2;HaplotypeScore=79.8345;InbreedingCoeff=0.9152;MQ=69.92;MQ0=0;MQRankSum=-13.099;QD=37.58;ReadPosRankSum=0.208;VQSLOD=4.1089;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,7:7:18.06:237,18,0	0/0:10,0:10:30.10:0,30,479	0/0:11,0:11:32.96:0,33,443	0/1:3,0:3:1.33:1,0,71	1/1:0,28:28:60.20:837,60,0	0/0:15,0:15:45.15:0,45,712	0/0:7,0:7:21.05:0,21,312	0/0:18,0:18:54.18:0,54,857	0/0:18,0:18:54.18:0,54,860	0/0:26,0:26:78.27:0,78,1246	0/0:19,0:19:57.18:0,57,885	0/0:16,0:16:48.16:0,48,760	0/0:20,0:20:60.20:0,60,959	0/0:15,0:15:45.14:0,45,692	0/0:8,0:8:21.06:0,21,312	0/0:7,0:7:18.05:0,18,265	0/0:13,0:13:39.13:0,39,623	0/0:6,0:6:18.06:0,18,287	1/1:1,20:21:60.20:837,60,0	1/1:0,16:16:48.16:663,48,0	1/1:0,1:1:3.01:35,3,0	0/0:10,0:10:30.09:0,30,458	0/0:17,0:17:51.17:0,51,815	0/0:8,0:8:24.06:0,24,359	0/0:9,0:9:27.08:0,27,410	1/1:0,20:20:60.20:836,60,0	1/1:0,20:20:60.20:837,60,0	1/1:0,20:20:60.20:827,60,0
chr10	44858335	.	T	TA	7412.94	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=14.115;DP=465;FS=1.702;HRun=7;HaplotypeScore=92.0210;InbreedingCoeff=0.9396;MQ=69.93;MQ0=1;MQRankSum=-5.528;QD=24.55;ReadPosRankSum=-2.033;VQSLOD=4.1435;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,7:8:18.06:217,18,0	0/0:1,0:5:6.11:0,6,18	0/0:13,0:13:31.77:0,32,266	0/0:4,0:4:8.88:0,9,73	1/1:5,27:32:72.09:820,72,0	0/0:20,0:20:60.09:0,60,575	0/0:9,0:9:24.02:0,24,226	1/1:9,24:33:72.18:833,72,0	0/0:22,0:22:60.09:0,60,579	1/1:2,0:17:48.43:247,48,0	1/1:2,0:21:57.50:292,58,0	0/0:7,0:7:21.03:0,21,203	0/0:14,0:14:42.04:0,42,394	0/0:19,0:19:48.04:0,48,456	1/1:1,1:12:25.88:132,26,0	1/1:1,0:11:30.57:151,31,0	0/0:9,0:9:21.02:0,21,202	1/1:2,0:9:0.28:56,0,0	1/1:1,12:13:36.11:435,36,0	1/1:0,33:33:96.29:1159,96,0	1/1:0,11:11:33.10:399,33,0	0/0:9,0:9:21.02:0,21,198	0/0:20,0:20:54.08:0,54,521	0/0:12,0:12:30.05:0,30,290	1/1:2,0:17:43.13:219,43,0	1/1:3,25:28:81.24:969,81,0	1/1:7,26:32:72.22:869,72,0	1/1:2,21:23:50.82:616,51,0
chr10	44858607	.	AT	A	4494.24	PASS	AC=30;AF=0.556;AN=54;BaseQRankSum=11.588;DP=327;FS=6.934;HRun=9;HaplotypeScore=82.6729;InbreedingCoeff=0.9637;MQ=57.66;MQ0=0;MQRankSum=-6.929;QD=22.25;ReadPosRankSum=-1.755;VQSLOD=4.8343;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,7:11:21.01:192,21,0	0/0:6,0:6:15.01:0,15,153	0/0:5,0:5:12.03:0,12,125	./.	1/1:6,16:22:51.02:466,51,0	0/0:18,0:18:48.13:0,48,545	0/0:9,0:9:21.02:0,21,228	1/1:2,14:14:35.98:322,36,0	0/0:15,1:16:14.66:0,15,423	1/1:5,12:17:42:380,42,0	1/1:2,20:22:61.25:543,61,0	0/0:8,0:8:24.05:0,24,258	0/0:10,0:10:18.05:0,18,208	0/0:9,0:9:21.06:0,21,242	1/1:2,9:11:27.01:246,27,0	1/1:0,6:6:18.01:165,18,0	0/0:6,0:6:5.98:0,6,54	1/1:0,4:4:12.01:110,12,0	1/1:1,11:11:27.01:247,27,0	1/1:4,11:15:31.19:260,31,0	1/1:2,11:13:27.01:246,27,0	0/0:16,0:16:36.11:0,36,416	0/0:12,0:12:36.11:0,36,415	0/0:6,0:6:15.04:0,15,173	1/1:2,10:12:30.01:274,30,0	1/1:1,12:13:36.02:329,36,0	1/1:3,13:16:48.03:439,48,0	1/1:2,10:12:30.01:275,30,0
chr10	44858627	.	CAAAAGGAGCCATGGCAAAAAAAAAAAAAAAAAA	C	6438.37	PASS	AB=0.800;AC=23;AF=0.460;AN=50;BaseQRankSum=7.187;DP=258;FS=16.958;HRun=0;HaplotypeScore=224.0484;InbreedingCoeff=0.6977;MQ=67.77;MQ0=2;MQRankSum=-6.274;QD=53.65;ReadPosRankSum=3.972;VQSLOD=2.5609;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:4,2:6:6.02:476,6,0	0/0:2,0:2:3.01:0,3,160	0/0:15,0:8:15.05:0,15,550	0/0:14,0:9:19.31:0,19,589	1/1:12,2:14:6.01:259,6,0	0/0:11,0:11:18.06:0,18,1873	0/0:7,0:7:12.03:0,12,636	1/1:13,0:12:8.96:71,9,0	0/0:13,0:13:30.09:0,30,1833	1/1:9,3:12:9.03:746,9,0	1/1:16,2:18:9.03:511,9,0	0/0:8,0:8:21.07:0,21,1536	0/0:5,0:5:12.04:0,12,925	0/0:8,0:8:6.02:0,6,226	1/1:4,2:6:6.02:497,6,0	1/1:4,1:5:3.01:248,3,0	0/0:4,0:4:6.02:0,6,251	./.	./.	1/1:6,4:10:12.04:938,12,0	./.	0/0:12,0:12:27.09:0,27,2216	0/0:9,0:9:21.07:0,21,1604	0/0:5,0:5:9.03:0,9,634	1/1:5,3:8:9.03:723,9,0	1/1:6,2:8:6.02:497,6,0	1/1:8,4:12:12.04:984,12,0	0/1:6,1:8:99:488,0,133
chr10	44858711	.	G	GCTAAACATTTGAACA	35037.10	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=7.782;DP=376;FS=1.813;HRun=0;HaplotypeScore=226.3731;InbreedingCoeff=0.9518;MQ=58.68;MQ0=1;MQRankSum=-15.035;QD=151.02;ReadPosRankSum=1.053;VQSLOD=4.5807;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,0:8:21.07:1187,21,0	1/1:6,0:6:18.06:1119,18,0	0/0:16,0:15:42.14:0,42,1330	0/0:12,0:11:30.08:0,30,1058	1/1:23,0:23:54:2952,54,0	0/0:18,0:18:54.19:0,54,2258	0/0:11,0:11:33.11:0,33,1398	1/1:22,0:20:42.07:2244,42,0	0/0:14,0:14:39.13:0,39,1526	1/1:10,11:21:60.21:4223,60,0	1/1:6,9:14:36.12:2427,36,0	0/0:10,0:10:30.09:0,30,1201	0/0:14,0:14:42.13:0,42,1780	0/0:16,0:16:39.12:0,39,1575	1/1:5,8:14:39.13:2604,39,0	1/1:2,2:4:12.04:785,12,0	1/1:7,0:7:16.87:945,17,0	1/1:3,0:3:2.93:213,3,0	1/1:11,0:11:7.69:1261,8,0	1/1:23,0:23:60.17:3174,60,0	1/1:8,0:8:15.05:749,15,0	0/0:12,0:12:36.12:0,36,1618	0/0:16,0:16:48.16:0,48,2091	0/0:5,0:5:15.05:0,15,675	1/1:5,6:11:33.11:2283,33,0	1/1:16,0:16:42.14:2412,42,0	1/1:26,0:25:75.24:4150,75,0	1/1:13,0:13:39.13:2308,39,0
chr10	44858712	.	C	CTGAACATTTGAACAT	41663.91	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=2.189;DP=421;FS=2.306;HRun=0;HaplotypeScore=233.8727;InbreedingCoeff=0.9425;MQ=57.10;MQ0=1;MQRankSum=-15.141;QD=151.51;ReadPosRankSum=-0.369;VQSLOD=4.4426;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,6:12:24.08:1566,24,0	1/1:1,5:6:18.06:1347,18,0	0/0:16,0:15:39.11:0,39,1295	0/0:12,0:11:33.10:0,33,1115	1/1:17,13:31:72.02:4376,72,0	0/0:18,0:18:54.16:0,54,2208	0/0:11,0:11:33.11:0,33,1411	1/1:14,0:11:4.09:966,4,0	0/0:14,0:14:42.11:0,42,1543	1/1:21,0:21:60.21:3493,60,0	1/1:14,0:13:36.12:2079,36,0	0/0:10,0:10:30.10:0,30,1195	0/0:14,0:14:39.13:0,39,1755	0/0:16,0:16:39.13:0,39,1619	1/1:14,0:14:39.10:2163,39,0	1/1:4,0:4:12.04:654,12,0	1/1:5,3:8:15.05:1122,15,0	1/1:3,0:3:2.93:174,3,0	1/1:9,5:14:36.11:1955,36,0	1/1:16,16:33:90.31:5434,90,0	1/1:8,1:9:18.06:1012,18,0	0/0:12,0:12:36.12:0,36,1605	0/0:18,0:18:48.16:0,48,2109	0/0:5,0:5:15.05:0,15,675	1/1:11,0:11:33.07:1898,33,0	1/1:13,9:25:63.22:4000,63,0	1/1:17,16:34:93.32:6170,93,0	1/1:10,8:21:48.16:3257,48,0
chr10	44858774	.	A	AT	1076.85	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=9.872;DP=423;FS=7.477;HRun=2;HaplotypeScore=84.8708;InbreedingCoeff=0.8851;MQ=69.55;MQ0=1;MQRankSum=-9.310;QD=19.23;ReadPosRankSum=-0.064;VQSLOD=3.0346;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:36.11:0,36,446	0/0:3,0:3:3.01:0,3,37	0/0:16,0:15:42.13:0,42,511	0/0:11,0:11:33.10:0,33,398	0/0:32,0:32:87.27:0,87,1078	0/0:21,0:21:54.17:0,54,669	0/0:13,0:13:39.12:0,39,483	1/1:1,8:3:3.01:43,3,0	0/0:14,0:14:39.12:0,39,483	1/1:0,16:15:39.10:424,39,0	1/1:1,11:11:24:220,24,0	0/0:17,0:17:48.15:0,48,595	0/0:22,0:22:63.20:0,63,780	0/0:7,0:7:18.06:0,18,223	1/1:0,5:5:15.03:153,15,0	1/1:0,3:3:9.02:94,9,0	0/0:15,0:15:39.10:0,39,468	1/1:0,1:1:3.01:33,3,0	0/0:22,0:21:57.18:0,57,706	0/0:34,0:34:93.28:0,93,1140	0/0:8,0:8:21.07:0,21,260	0/0:20,0:20:57.18:0,57,706	0/0:22,0:22:66.21:0,66,818	0/0:7,0:7:21.05:0,21,248	1/1:0,10:9:27.06:290,27,0	0/0:19,0:19:54.13:0,54,652	0/0:29,0:29:72.17:0,72,860	0/0:19,0:19:42.12:0,42,508
chr10	44858777	.	ATGT	A	1230.98	PASS	AC=12;AF=0.222;AN=54;BaseQRankSum=9.831;DP=425;FS=7.595;HRun=0;HaplotypeScore=96.0155;InbreedingCoeff=0.9227;MQ=69.91;MQ0=1;MQRankSum=-8.676;QD=26.19;ReadPosRankSum=1.641;VQSLOD=3.3166;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:42.11:0,42,846	0/0:2,0:2:6.02:0,6,134	0/0:14,0:14:39.11:0,39,764	0/0:11,0:11:33.11:0,33,605	0/0:34,0:34:84.29:0,84,1840	0/0:21,0:21:63.22:0,63,1356	0/0:15,0:15:45.11:0,45,941	./.	0/0:16,0:16:42.14:0,42,883	1/1:0,16:15:39.12:501,39,0	1/1:2,9:10:24.07:277,24,0	0/0:18,0:18:51.18:0,51,1122	0/0:22,0:22:60.21:0,60,1306	0/0:7,0:7:18.06:0,18,402	1/1:1,5:6:15.05:183,15,0	1/1:0,3:3:9.03:112,9,0	0/0:17,0:17:48.16:0,48,989	1/1:0,1:1:3.01:39,3,0	0/0:22,0:21:57.19:0,57,1212	0/0:34,0:34:96.28:0,96,1928	0/0:8,0:8:24.08:0,24,518	0/0:21,0:21:60.19:0,60,1281	0/0:22,0:22:66.23:0,66,1455	0/0:7,0:7:21.07:0,21,469	1/1:1,9:9:24.07:294,24,0	0/0:19,0:19:48.12:0,48,996	0/0:26,0:26:72.25:0,72,1559	0/0:19,0:19:42.14:0,42,888
chr10	44859154	.	A	AG	4899.49	PASS	AB=0.583;AC=13;AF=0.232;AN=56;BaseQRankSum=3.623;DP=498;FS=8.135;HRun=0;HaplotypeScore=106.2174;InbreedingCoeff=0.9145;MQ=63.02;MQ0=0;MQRankSum=-0.229;QD=37.98;ReadPosRankSum=-0.396;VQSLOD=3.9146;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:39.05:0,39,486	0/0:7,0:7:21.07:0,21,293	0/0:15,0:15:39.11:0,39,501	0/0:12,0:11:29.85:0,30,330	0/0:39,0:31:72.24:0,72,1003	0/0:17,0:17:51.17:0,51,712	0/0:10,0:10:30.05:0,30,382	1/1:2,28:27:81.24:1174,81,0	0/0:20,0:20:60.19:0,60,823	1/1:2,19:20:60.17:874,60,0	1/1:0,25:24:63.13:919,63,0	0/0:15,0:15:45.15:0,45,629	0/0:17,0:17:51.17:0,51,713	0/0:13,0:13:39.13:0,39,545	1/1:0,14:14:33.11:504,33,0	1/1:0,15:15:42.14:642,42,0	0/0:11,0:11:33.09:0,33,439	0/1:4,10:14:7.34:419,0,7	0/0:15,0:15:39.06:0,39,479	0/0:19,0:18:42.13:0,42,570	0/0:12,0:12:30.09:0,30,404	0/0:24,0:24:72.22:0,72,970	0/0:24,0:24:69.21:0,69,934	0/0:21,0:21:60.18:0,60,806	1/1:0,10:10:24.08:366,24,0	0/0:20,0:20:57.04:0,57,748	0/0:30,0:30:90.24:0,90,1195	0/0:14,0:14:39.10:0,39,524
chr10	44859207	.	TTGAG	T	957.98	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=1.148;DP=518;FS=6.407;HRun=0;HaplotypeScore=126.2738;InbreedingCoeff=0.9890;MQ=80.85;MQ0=1;MQRankSum=-2.732;QD=50.42;ReadPosRankSum=2.204;VQSLOD=4.7380;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:39.13:0,39,1090	1/1:0,6:6:18.06:359,18,0	0/0:26,0:24:69.20:0,69,1656	0/0:18,0:17:41.39:0,41,1037	0/0:30,0:24:42.14:0,42,1169	0/0:20,0:20:60.21:0,60,1604	0/0:11,0:11:33.11:0,33,923	0/0:39,0:39:99:0,111,3025	0/0:20,0:20:57.20:0,57,1551	0/0:26,0:24:69.24:0,69,1895	0/0:17,0:16:45.15:0,45,1249	0/0:13,0:13:39.13:0,39,1091	0/0:16,0:16:48.16:0,48,1237	0/0:20,0:20:54.19:0,54,1491	0/0:16,0:16:42.13:0,42,1116	0/0:7,0:7:21.07:0,21,587	1/1:1,12:13:36.12:718,36,0	0/0:9,0:9:21.07:0,21,582	0/0:22,0:22:54.19:0,54,1473	0/0:26,0:25:60.21:0,60,1632	0/0:7,0:7:21.07:0,21,587	0/0:27,0:27:81.28:0,81,2215	0/0:21,0:21:63.19:0,63,1701	0/0:20,0:20:57.18:0,57,1512	0/0:13,0:12:30.10:0,30,809	0/0:20,0:19:51.18:0,51,1423	0/0:22,0:21:60.19:0,60,1555	0/0:19,0:19:57.20:0,57,1571
chr10	44859752	.	CTTGAA	C	3802.11	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=7.075;DP=637;FS=2.229;HRun=0;HaplotypeScore=116.3385;InbreedingCoeff=0.9765;MQ=51.20;MQ0=31;MQRankSum=-7.523;QD=34.25;ReadPosRankSum=0.018;VQSLOD=3.0937;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:37:87.30:0,87,2544	0/0:8,0:8:18.06:0,18,549	0/0:29,0:7:21.04:0,21,478	0/0:29,0:5:15.04:0,15,374	0/0:29,0:28:60.16:0,60,1606	0/0:19,0:19:54.17:0,54,1559	0/0:22,0:22:54.19:0,54,1626	1/1:4,12:14:30.04:465,30,0	0/0:27,0:27:81.26:0,81,2386	1/1:1,16:16:42.14:862,42,0	1/1:4,23:24:45.15:862,45,0	0/0:26,0:26:63.22:0,63,1907	0/0:16,0:16:45.15:0,45,1357	0/0:24,0:24:66.23:0,66,1938	1/1:2,17:16:36.12:714,36,0	1/1:3,6:9:15.05:308,15,0	0/0:35,0:33:78.27:0,78,2365	1/1:3,5:7:9.03:185,9,0	0/0:18,0:12:30.09:0,30,848	0/0:27,0:26:57.20:0,57,1737	0/0:21,0:21:51.10:0,51,1372	0/0:25,0:25:66.22:0,66,1925	0/0:23,0:23:66.23:0,66,2013	0/0:25,0:25:72.25:0,72,2196	1/1:3,12:13:21.07:407,21,0	0/0:35,1:30:13.73:0,14,2056	0/0:33,0:29:72.24:0,72,2192	0/0:15,0:14:33.11:0,33,991
chr10	44859851	.	T	TCAG	2482.63	PASS	AB=0.571;AC=13;AF=0.241;AN=54;BaseQRankSum=9.754;DP=503;FS=0.608;HRun=0;HaplotypeScore=105.4068;InbreedingCoeff=0.8615;MQ=80.69;MQ0=3;MQRankSum=-9.742;QD=32.67;ReadPosRankSum=-0.258;VQSLOD=3.4297;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,11:15:21.05:436,21,0	0/0:12,0:12:36.12:0,36,610	0/0:31,0:30:84.24:0,84,1307	0/0:24,0:20:54.17:0,54,871	1/1:3,8:8:18.06:411,18,0	0/0:17,0:17:51.17:0,51,870	0/0:20,0:20:57.19:0,57,963	0/0:31,0:30:87.26:0,87,1426	0/0:15,0:15:45.15:0,45,768	0/0:27,0:26:78.26:0,78,1291	0/0:25,0:25:51.17:0,51,867	0/0:25,0:25:75.24:0,75,1253	0/0:22,0:22:63.22:0,63,1075	0/0:20,0:20:60.21:0,60,1017	0/0:16,0:15:45.15:0,45,756	0/0:16,0:16:36.12:0,36,614	0/0:25,0:26:75.26:0,75,1269	0/0:10,0:10:27.09:0,27,453	1/1:3,9:11:24.08:523,24,0	1/1:2,4:5:9.03:207,9,0	1/1:4,5:8:6.02:138,6,0	0/0:30,0:30:84.28:0,84,1402	0/0:15,0:15:36.09:0,36,584	0/0:25,0:25:72.23:0,72,1201	0/0:18,0:18:48.16:0,48,806	0/1:3,9:7:33.12:327,0,33	1/1:1,9:10:27.09:621,27,0	./.
chr10	44860003	.	T	TATG	7504.15	PASS	AB=0.879;AC=17;AF=0.304;AN=56;BaseQRankSum=-0.477;DP=517;FS=5.591;HRun=0;HaplotypeScore=92.9947;InbreedingCoeff=0.8914;MQ=63.67;MQ0=3;MQRankSum=-9.540;QD=45.21;ReadPosRankSum=4.229;VQSLOD=6.8705;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,17:16:45.15:1034,45,0	0/0:9,0:9:18.06:0,18,297	0/0:21,0:21:63.21:0,63,1033	0/0:11,0:11:24.55:0,25,392	1/1:1,32:30:78.27:1775,78,0	0/0:25,0:25:69.24:0,69,1174	0/0:22,0:22:66.21:0,66,1098	0/0:29,0:29:81.28:0,81,1380	0/0:19,0:19:57.20:0,57,972	0/0:30,0:30:78.26:0,78,1296	0/0:15,0:14:39.13:0,39,653	0/0:23,0:23:63.20:0,63,1048	0/0:26,0:26:78.26:0,78,1306	0/0:14,0:14:39.13:0,39,665	0/0:11,0:11:33.11:0,33,563	0/0:15,0:14:42.14:0,42,703	0/1:25,4:29:99:123,0,1137	0/0:4,0:4:12.04:0,12,205	1/1:1,8:6:15.05:346,15,0	1/1:0,20:20:36.12:827,36,0	1/1:0,3:3:9.03:207,9,0	0/0:33,0:33:96.33:0,96,1624	0/0:17,0:17:51.15:0,51,842	0/0:12,0:12:36.08:0,36,583	0/0:15,0:13:36.12:0,36,577	1/1:2,23:22:12.04:1329,12,0	1/1:1,13:13:33.11:758,33,0	1/1:0,16:16:48.16:1105,48,0
chr10	44860243	.	T	TG	1143.47	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=9.656;DP=389;FS=3.238;HRun=3;HaplotypeScore=65.5193;InbreedingCoeff=0.9399;MQ=88.79;MQ0=1;MQRankSum=-7.966;QD=23.82;ReadPosRankSum=0.019;VQSLOD=3.0267;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,7:6:15.05:209,15,0	0/0:7,0:7:21.06:0,21,252	0/0:20,0:20:15.09:0,15,539	0/0:26,0:26:41.42:0,41,605	1/1:1,5:5:15.05:208,15,0	0/0:19,0:19:51.16:0,51,612	0/0:18,0:18:51.16:0,51,611	0/0:11,0:10:24.07:0,24,288	0/0:29,0:29:84.23:0,84,984	0/0:17,0:17:45.13:0,45,532	0/0:7,0:7:21.05:0,21,241	0/0:17,0:17:51.16:0,51,612	0/0:19,0:19:54.17:0,54,648	0/0:25,0:25:69.21:0,69,828	0/0:16,0:16:39.11:0,39,456	0/0:18,0:16:36.11:0,36,432	0/0:32,0:32:90.25:0,90,1065	0/0:13,0:13:33.08:0,33,382	1/1:1,4:5:6.02:84,6,0	1/1:0,5:4:9.03:126,9,0	1/1:2,6:6:15.05:209,15,0	0/0:12,0:12:33.10:0,33,395	0/0:8,0:8:24.06:0,24,276	0/0:20,0:20:57.17:0,57,684	0/0:7,0:7:18.06:0,18,216	1/1:2,6:6:15.05:210,15,0	1/1:1,5:6:12.04:167,12,0	1/1:0,3:3:9.03:126,9,0
chr10	44860752	.	GACATATATAACTACTATACATATATA	G	24950.21	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=14.963;DP=495;FS=1.321;HRun=0;HaplotypeScore=334.0052;InbreedingCoeff=0.9309;MQ=73.53;MQ0=0;MQRankSum=-14.443;QD=103.10;ReadPosRankSum=5.955;VQSLOD=3.5376;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,10:18:30.10:1913,30,0	1/1:2,10:12:30.10:2093,30,0	0/0:13,0:13:33.11:0,33,1933	0/0:20,0:20:49.05:0,49,3010	1/1:5,17:22:27.09:1764,27,0	0/0:24,0:24:72.23:0,72,7255	0/0:23,0:23:69.24:0,69,7288	1/1:8,0:6:3.01:75,3,0	0/0:28,0:28:84.29:0,84,8593	1/1:5,5:10:15.05:907,15,0	1/1:3,14:17:39.13:2605,39,0	0/0:30,0:30:90.31:0,90,10025	0/0:12,0:12:36.12:0,36,3900	0/0:28,0:28:84.29:0,84,9542	1/1:4,13:17:30.10:2102,30,0	1/1:2,8:10:21.07:1482,21,0	1/1:9,6:15:12:847,12,0	1/1:3,3:6:3.01:212,3,0	1/1:4,13:16:39.11:2565,39,0	1/1:3,12:15:33.11:2311,33,0	1/1:15,7:20:12.04:683,12,0	0/0:24,0:24:69.22:0,69,5689	0/0:23,0:23:66.23:0,66,6660	0/0:27,0:27:75.21:0,75,7521	1/1:5,5:10:15.05:1059,15,0	1/1:5,14:19:39.11:2214,39,0	1/1:2,8:9:17.72:1270,18,0	1/1:3,11:14:12.04:847,12,0
chr10	44861495	.	G	GTGTGTCAGGTA	10264.88	PASS	AB=0.697;AC=15;AF=0.268;AN=56;BaseQRankSum=9.698;DP=553;FS=29.610;HRun=0;HaplotypeScore=190.1111;InbreedingCoeff=0.8699;MQ=79.91;MQ0=0;MQRankSum=-12.603;QD=96.84;ReadPosRankSum=0.947;VQSLOD=2.8905;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,4:9:12.04:690,12,0	0/0:15,0:15:41.86:0,42,1442	0/0:13,0:13:39.09:0,39,1047	0/0:20,0:20:57.20:0,57,1863	1/1:10,11:20:26.10:1544,26,0	0/0:34,0:34:99:0,99,3365	0/0:20,0:20:57.20:0,57,1865	0/0:29,0:29:81.28:0,81,2823	0/0:18,0:18:54.17:0,54,1731	0/0:27,0:27:78.26:0,78,2558	0/0:18,0:18:54.19:0,54,1924	0/0:15,0:15:45.12:0,45,1440	0/0:37,0:37:99:0,105,3531	0/0:20,0:20:51.17:0,51,1728	0/0:21,0:21:63.22:0,63,2155	0/0:11,0:11:33.10:0,33,1039	0/0:32,0:32:87.28:0,87,2961	0/0:31,0:31:90.31:0,90,3148	1/1:6,0:6:9.03:417,9,0	1/1:9,13:16:30.10:1596,30,0	1/1:0,2:2:6.02:345,6,0	0/0:26,0:26:75.26:0,75,2493	0/0:25,0:25:59.97:0,60,1907	0/0:17,0:17:51.18:0,51,1762	0/0:18,0:18:54.17:0,54,1702	0/1:13,10:23:55.92:2585,0,56	1/1:6,10:15:42.14:2224,42,0	1/1:2,5:7:15.05:863,15,0
chr10	44861535	.	C	CAACAGGTT	8225.24	PASS	AB=0.610;AC=15;AF=0.268;AN=56;BaseQRankSum=6.616;DP=582;FS=30.920;HRun=0;HaplotypeScore=161.0174;InbreedingCoeff=0.8932;MQ=90.74;MQ0=0;MQRankSum=-13.077;QD=69.71;ReadPosRankSum=-1.304;VQSLOD=2.8716;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,6:7:18.06:743,18,0	0/0:16,0:16:39.13:0,39,1119	0/0:26,0:26:66.23:0,66,1758	0/0:26,0:26:69.20:0,69,1677	1/1:8,13:16:36.11:1341,36,0	0/0:29,0:29:81.28:0,81,2285	0/0:17,0:17:51.17:0,51,1388	0/0:18,0:18:48.16:0,48,1327	0/0:21,0:21:57.20:0,57,1635	0/0:35,0:35:99:0,102,2696	0/0:22,0:19:51.17:0,51,1385	0/0:18,0:18:48.16:0,48,1365	0/0:33,0:33:93.32:0,93,2667	0/0:22,0:22:63.20:0,63,1677	0/0:22,0:22:60.21:0,60,1685	0/0:15,0:15:42.14:0,42,1206	0/0:29,0:29:81.26:0,81,2261	0/0:25,0:25:69.24:0,69,1963	1/1:5,2:7:12.04:480,12,0	1/1:17,16:23:30.06:979,30,0	1/1:2,3:5:15.05:625,15,0	0/0:26,0:26:66.21:0,66,1781	0/0:23,0:23:51.16:0,51,1423	0/0:21,0:21:63.20:0,63,1743	0/0:20,0:20:54.19:0,54,1548	0/1:9,16:25:28.97:2170,0,29	1/1:4,11:15:39.13:1573,39,0	1/1:3,2:5:12:314,12,0
chr10	44861603	.	G	GT	4778.72	PASS	AB=0.538;AC=15;AF=0.268;AN=56;BaseQRankSum=15.301;DP=594;FS=4.249;HRun=1;HaplotypeScore=93.2465;InbreedingCoeff=0.9452;MQ=91.54;MQ0=0;MQRankSum=-10.868;QD=35.40;ReadPosRankSum=5.757;VQSLOD=4.7562;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,15:16:42.14:668,42,0	0/0:9,0:9:27.08:0,27,362	0/0:31,0:31:80.54:0,81,1090	0/0:22,0:22:65.90:0,66,813	1/1:1,28:21:48.16:766,48,0	0/0:26,0:26:75.23:0,75,1031	0/0:24,0:24:69.69:0,70,949	0/0:29,0:29:81.23:0,81,1096	0/0:24,0:24:72.24:0,72,1007	0/0:28,0:26:75.24:0,75,1034	0/0:22,0:19:54.11:0,54,731	0/0:27,0:27:81.27:0,81,1133	0/0:32,0:32:90.29:0,90,1241	0/0:27,0:27:81.23:0,81,1081	0/0:24,0:24:72.24:0,72,1005	0/0:11,0:11:30.10:0,30,420	0/0:19,0:19:57.19:0,57,795	0/0:8,0:8:21.03:0,21,270	1/1:2,9:10:27.08:409,27,0	1/1:1,25:25:54.18:859,54,0	1/1:0,9:9:27.09:430,27,0	0/0:35,0:35:69.20:0,69,928	0/0:18,1:17:45.12:0,45,629	0/0:21,0:21:63.21:0,63,881	0/0:21,0:21:63.19:0,63,861	0/1:2,12:13:1.70:498,0,2	1/1:0,13:12:36.12:574,36,0	1/1:0,15:12:36.12:575,36,0
chr10	44863536	.	GAAGAAA	G	1496.86	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=7.952;DP=213;FS=7.285;HRun=0;HaplotypeScore=55.6361;InbreedingCoeff=0.7819;MQ=49.94;MQ0=1;MQRankSum=-5.748;QD=18.03;ReadPosRankSum=-1.587;VQSLOD=1.4080;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,1:7:14.85:102,15,0	0/0:2,0:2:6.02:0,6,106	0/0:3,0:2:5.95:0,6,110	0/0:11,0:10:15.03:0,15,293	1/1:0,9:16:26.69:178,27,0	0/0:2,0:2:6.02:0,6,215	0/0:2,0:2:6.01:0,6,133	0/0:10,0:10:14.96:0,15,327	0/0:5,0:5:12.02:0,12,341	0/0:15,0:15:33.11:0,33,904	0/0:18,0:17:39.12:0,39,887	0/0:5,0:5:12.03:0,12,259	0/0:3,0:3:9.02:0,9,240	0/0:1,0:1:3.01:0,3,108	0/0:6,0:6:12.04:0,12,321	0/0:7,0:7:21.04:0,21,437	0/0:10,0:10:27.09:0,27,566	0/0:5,0:5:7.22:0,7,109	1/1:0,6:6:18.01:314,18,0	1/1:0,2:13:35.63:242,36,0	1/1:0,2:7:11.87:80,12,0	0/0:2,0:2:3.01:0,3,103	0/0:8,0:8:24.03:0,24,482	0/0:2,0:2:6.02:0,6,203	0/0:13,0:13:27.02:0,27,643	1/1:0,7:10:26.95:387,27,0	1/1:1,16:20:26.87:364,27,0	1/1:1,2:3:2.98:21,3,0
chr10	44863539	.	G	GA	489.61	PASS	AB=0.571;AC=15;AF=0.341;AN=44;BaseQRankSum=-2.020;DP=198;FS=22.480;HRun=8;HaplotypeScore=46.4338;InbreedingCoeff=0.5583;MQ=49.15;MQ0=1;MQRankSum=0.095;QD=7.10;ReadPosRankSum=-1.699;VQSLOD=-0.3447;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	0/0:2,0:2:2.92:0,3,17	1/1:3,0:2:2.96:19,3,0	0/0:8,0:7:5.68:0,6,55	./.	0/0:2,0:2:6:0,6,55	0/0:2,0:2:3:0,3,27	1/1:10,0:10:9.36:80,9,0	0/0:4,0:4:9:0,9,82	1/1:3,9:12:24.07:274,24,0	1/1:5,12:16:14.88:114,15,0	0/0:4,0:4:3:0,3,27	0/0:3,0:3:6:0,6,55	0/0:1,0:1:3:0,3,27	0/1:1,3:4:0:0,0,0	1/1:3,3:6:3.01:35,3,0	0/0:3,0:11:2.80:0,3,19	1/1:3,2:5:4.56:39,5,0	0/0:7,0:6:11.71:0,12,38	./.	./.	./.	0/0:7,0:7:5.99:0,6,55	0/0:2,0:2:6:0,6,55	1/1:1,11:12:8.94:73,9,0	0/0:10,0:10:9.31:0,9,31	0/0:20,0:19:8.63:0,9,28	./.
chr10	44863653	.	GGA	G	5780.71	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-0.874;DP=296;FS=35.935;HRun=0;HaplotypeScore=67.6765;InbreedingCoeff=0.9169;MQ=70.45;MQ0=0;MQRankSum=-4.666;QD=41.59;ReadPosRankSum=1.288;VQSLOD=3.2210;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,22:22:60.20:962,60,0	0/0:5,0:5:14.60:0,15,84	0/0:13,0:11:22.56:0,23,337	0/0:2,0:2:2.88:0,3,15	1/1:1,22:23:60.09:891,60,0	0/0:8,0:8:24.08:0,24,486	0/0:4,0:4:12.04:0,12,242	0/0:15,0:15:40.32:0,40,318	0/0:4,0:4:12.04:0,12,243	0/0:19,0:19:21.79:0,22,362	0/0:15,0:15:22.20:0,22,235	0/0:5,0:5:15.05:0,15,297	0/0:5,0:5:15.05:0,15,304	0/0:8,0:8:24.08:0,24,423	0/0:6,0:6:17.99:0,18,157	0/0:9,0:9:26.84:0,27,194	0/0:12,0:12:33.11:0,33,653	0/0:4,0:4:12.01:0,12,107	1/1:0,14:14:42.07:616,42,0	1/1:0,20:20:51.17:812,51,0	1/1:0,6:6:18.06:289,18,0	0/0:7,0:7:21.07:0,21,421	0/0:3,0:3:9.03:0,9,182	0/0:2,0:2:6.02:0,6,122	0/0:11,0:11:32.96:0,33,287	1/1:0,13:13:39.05:572,39,0	1/1:0,24:24:60.20:958,60,0	1/1:0,17:17:42.14:680,42,0
chr10	44863654	.	GA	G	1442.47	PASS	AC=20;AF=0.370;AN=54;BaseQRankSum=7.041;DP=297;FS=15.661;HRun=9;HaplotypeScore=77.1572;InbreedingCoeff=0.9424;MQ=68.94;MQ0=0;MQRankSum=-0.254;QD=9.07;ReadPosRankSum=0.701;VQSLOD=0.7275;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:22:52.39:212,52,0	1/1:0,5:5:15.01:137,15,0	0/0:12,0:10:10.25:0,10,175	./.	1/1:23,0:23:47.15:218,47,0	0/0:8,0:8:24.07:0,24,276	0/0:4,0:4:12.04:0,12,138	1/1:5,10:15:30:274,30,0	0/0:4,0:4:12.04:0,12,138	0/0:19,0:19:51.15:0,51,587	0/0:15,0:15:33.03:0,33,353	0/0:5,0:5:15:0,15,158	0/0:5,0:5:15.04:0,15,173	0/0:8,0:8:21.05:0,21,232	0/0:6,0:6:18.05:0,18,206	0/0:9,0:9:27.08:0,27,311	0/0:12,0:12:33.10:0,33,379	0/0:4,0:4:12.03:0,12,137	1/1:14,0:13:31.93:143,32,0	1/1:20,0:20:43.82:177,44,0	1/1:6,0:6:15.58:58,16,0	0/0:7,0:7:21.06:0,21,242	0/0:3,0:3:9.03:0,9,104	0/0:2,0:2:6.02:0,6,69	0/0:13,0:13:39.07:0,39,419	1/1:13,0:13:28.46:107,28,0	1/1:24,0:24:51.15:191,51,0	1/1:17,0:17:36.35:137,36,0
chr10	44864564	.	AGAT	A	1035.83	PASS	AB=0.891;AC=18;AF=0.321;AN=56;BaseQRankSum=10.097;DP=448;FS=2.733;HRun=0;HaplotypeScore=132.0132;InbreedingCoeff=-0.4364;MQ=49.44;MQ0=8;MQRankSum=-7.302;QD=3.73;ReadPosRankSum=1.190;VQSLOD=2.7474;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:26:16.72:17,0,277	0/1:6,0:5:28.17:42,0,28	0/0:9,0:3:8.76:0,9,78	0/0:14,0:6:12.92:0,13,147	0/1:38,0:38:95.67:96,0,583	0/1:12,0:11:22.84:23,0,158	0/0:10,0:10:19.51:0,20,325	0/0:26,0:26:27.92:0,28,866	0/0:20,0:20:5.79:0,6,387	0/1:6,8:14:16.49:231,0,16	0/1:17,10:27:99:116,0,153	0/1:10,0:10:60.94:61,0,152	0/0:16,0:16:30.02:0,30,375	0/1:13,0:13:27.91:28,0,404	0/1:2,3:4:2.16:59,0,2	0/1:3,6:9:15.40:122,0,15	0/1:19,0:19:0.49:0,0,353	0/1:6,2:8:30.90:31,0,60	0/0:17,0:16:2.09:0,2,431	0/1:34,0:34:99:211,0,566	0/1:11,0:11:4.84:5,0,194	0/1:9,0:9:31.88:32,0,199	0/1:15,0:15:18.93:19,0,411	0/0:3,0:3:3.01:0,3,37	0/1:5,6:10:32.47:79,0,32	0/0:24,0:24:23.63:0,24,788	0/0:31,0:31:12.40:0,12,542	0/1:11,0:11:14.64:15,0,137
chr10	44864568	.	A	AG	2015.62	PASS	AB=0.887;AC=18;AF=0.321;AN=56;BaseQRankSum=8.152;DP=424;FS=11.739;HRun=0;HaplotypeScore=114.4283;InbreedingCoeff=-0.3944;MQ=51.47;MQ0=6;MQRankSum=-7.652;QD=6.76;ReadPosRankSum=-5.451;VQSLOD=1.5565;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:21,4:25:53.40:53,0,353	0/1:6,0:5:32.90:77,0,33	0/0:8,0:4:6.01:0,6,57	0/0:9,0:5:12.04:0,12,166	0/1:29,6:35:99:197,0,678	0/0:13,0:12:32.99:0,33,363	0/0:10,0:10:29.83:0,30,390	0/1:23,6:29:99:183,0,779	0/1:18,0:18:13.90:14,0,363	0/0:14,0:14:41.31:0,41,333	0/0:27,0:27:62.93:0,63,684	0/1:7,0:7:99:118,0,108	0/0:16,0:16:16.64:0,17,306	0/1:12,0:12:57.44:57,0,319	0/0:5,0:4:8.92:0,9,76	0/0:9,0:9:23.81:0,24,209	0/1:15,3:18:59.13:59,0,309	0/1:7,1:8:28.18:28,0,154	0/1:12,2:13:61.37:61,0,310	0/1:21,12:33:99:471,0,440	0/1:9,2:11:27.21:27,0,194	0/1:8,0:8:79.42:79,0,124	0/1:15,0:15:71.98:72,0,224	0/0:3,0:3:3.01:0,3,42	0/0:12,0:11:23.86:0,24,227	0/1:14,9:23:99:302,0,410	0/1:17,10:27:99:243,0,309	1/1:6,3:9:0.77:130,1,0
chr10	44864692	.	T	TA	6245.70	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=11.721;DP=446;FS=16.049;HRun=4;HaplotypeScore=64.4416;InbreedingCoeff=0.9563;MQ=69.05;MQ0=0;MQRankSum=-4.436;QD=36.74;ReadPosRankSum=0.696;VQSLOD=3.2578;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,19:21:60.20:814,60,0	0/0:6,0:6:18.05:0,18,204	0/0:9,0:9:9.54:0,10,242	0/0:6,0:6:14.48:0,14,142	1/1:1,19:20:51.04:633,51,0	0/0:13,0:13:39.11:0,39,442	0/0:14,0:14:39.11:0,39,442	0/0:32,0:32:84.23:0,84,945	0/0:22,0:22:54.14:0,54,603	0/0:23,0:22:66.19:0,66,749	0/0:24,0:24:69.20:0,69,783	0/0:9,0:9:21.06:0,21,238	0/0:11,0:11:30.09:0,30,340	0/0:10,0:10:30.07:0,30,332	0/0:8,0:8:24.07:0,24,272	0/0:15,0:15:45.06:0,45,494	0/0:11,0:11:30:0,30,323	0/0:10,0:10:20.57:0,21,237	1/1:0,23:23:69.19:908,69,0	1/1:0,28:28:72.24:984,72,0	1/1:1,10:11:27.09:369,27,0	0/0:14,0:14:39.10:0,39,431	0/0:23,0:23:69.15:0,69,750	0/0:1,0:1:3.01:0,3,34	0/0:15,0:15:42.12:0,42,476	1/1:2,18:20:54.18:735,54,0	1/1:3,31:34:93.31:1270,93,0	1/1:0,13:13:39.13:533,39,0
chr10	44864791	.	T	TCAGGCA	10185.66	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=0.290;DP=424;FS=0.000;HRun=0;HaplotypeScore=100.2257;InbreedingCoeff=0.9796;MQ=76.00;MQ0=0;MQRankSum=-12.992;QD=67.01;ReadPosRankSum=-1.987;VQSLOD=4.8666;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,10:18:27.98:837,28,0	0/0:5,0:5:15.05:0,15,350	0/0:17,0:17:45.11:0,45,918	0/0:11,0:11:14.99:0,15,418	1/1:5,10:17:33.11:1161,33,0	0/0:15,0:15:45.15:0,45,1042	0/0:10,0:10:27.09:0,27,630	0/0:30,0:30:87.28:0,87,1946	0/0:19,0:19:57.20:0,57,1329	0/0:14,0:14:39.13:0,39,910	0/0:16,0:16:42.12:0,42,888	0/0:14,0:14:33.11:0,33,770	0/0:15,0:15:45.14:0,45,1005	0/0:11,0:11:33.11:0,33,768	0/0:22,0:22:66.23:0,66,1540	0/0:9,0:9:27.09:0,27,610	0/0:16,0:16:45.15:0,45,999	0/0:6,0:6:18.06:0,18,420	1/1:16,13:31:75.16:2311,75,0	1/1:7,12:19:30.10:1030,30,0	1/1:4,3:7:15.04:396,15,0	0/0:12,0:12:36.12:0,36,840	0/0:11,0:11:33.11:0,33,768	0/0:4,0:4:12.04:0,12,278	0/0:15,0:15:42.14:0,42,980	1/1:10,13:24:57.18:1888,57,0	1/1:11,13:24:66.23:2139,66,0	1/1:7,4:11:12.04:423,12,0
chr10	44865003	.	T	TA	4534.28	PASS	AB=0.986;AC=24;AF=0.429;AN=56;BaseQRankSum=12.229;DP=492;FS=29.727;HRun=8;HaplotypeScore=100.9593;InbreedingCoeff=0.5474;MQ=68.39;MQ0=0;MQRankSum=-2.895;QD=16.43;ReadPosRankSum=-0.925;VQSLOD=3.0431;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:24:92.61:93,0,99	0/0:4,0:4:12.01:0,12,110	0/0:15,0:15:26.50:0,27,269	0/0:21,0:20:43.57:0,44,388	1/1:25,0:25:44.55:199,45,0	0/0:12,0:12:30.01:0,30,275	0/0:11,0:11:33.02:0,33,302	1/1:5,21:28:69.45:739,69,0	0/0:16,0:16:45.01:0,45,407	1/1:3,24:27:72.21:830,72,0	1/1:5,28:33:84.20:946,84,0	0/0:11,0:11:15.71:0,16,209	0/0:18,0:18:48.02:0,48,439	0/0:14,0:14:42.02:0,42,384	1/1:1,16:17:39.12:450,39,0	1/1:0,8:8:24.07:276,24,0	0/0:24,0:24:69.02:0,69,626	1/1:1,9:10:24.07:277,24,0	0/1:23,0:23:48.32:48,0,74	0/1:24,0:24:71.28:101,0,71	0/1:8,0:8:14.66:25,0,15	0/0:27,0:27:72.03:0,72,659	0/0:29,0:29:69.02:0,69,629	0/0:14,0:14:33.02:0,33,302	1/1:1,14:15:33.10:381,33,0	0/1:10,1:11:57.36:57,0,77	0/1:20,0:20:39.01:81,0,39	1/1:3,0:3:7.79:30,8,0
chr10	44865006	.	A	AG	2348.97	PASS	AB=0.840;AC=26;AF=0.464;AN=56;BaseQRankSum=14.367;DP=496;FS=20.815;HRun=0;HaplotypeScore=108.4684;InbreedingCoeff=0.5570;MQ=65.99;MQ0=0;MQRankSum=-2.580;QD=8.42;ReadPosRankSum=2.201;VQSLOD=1.8619;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:9,16:25:0.75:349,1,0	0/0:4,0:4:12.04:0,12,168	0/0:15,0:15:34.79:0,35,475	0/0:19,0:18:49.69:0,50,641	1/1:4,22:26:64.06:488,64,0	0/0:11,0:11:33.10:0,33,446	0/0:12,0:12:36.11:0,36,488	0/1:28,0:28:56.39:56,0,92	0/0:15,0:15:45.15:0,45,628	1/1:25,0:25:6.62:96,7,0	1/1:30,0:30:8.68:125,9,0	0/0:13,0:13:33.05:0,33,409	0/0:19,0:19:57.16:0,57,750	0/0:15,0:15:45.14:0,45,614	1/1:18,0:18:7.22:62,7,0	1/1:9,0:9:17.76:53,18,0	0/0:25,0:25:72.20:0,72,982	1/1:10,0:10:21.66:106,22,0	1/1:14,9:23:1.30:320,1,0	1/1:8,15:23:5.30:282,5,0	1/1:5,4:9:1.26:81,1,0	0/0:26,0:26:78.24:0,78,1059	0/0:28,0:28:84.20:0,84,1089	0/0:15,0:15:36.11:0,36,487	0/1:16,0:16:24.90:43,0,25	0/1:9,5:14:57.57:97,0,58	1/1:6,12:18:21.54:335,22,0	0/1:2,3:5:22.82:51,0,23
chr10	44865009	.	A	AAG	2808.88	PASS	AB=0.654;AC=10;AF=0.179;AN=56;BaseQRankSum=11.387;DP=494;FS=3.020;HRun=0;HaplotypeScore=113.5887;InbreedingCoeff=0.3953;MQ=64.51;MQ0=0;MQRankSum=-7.924;QD=19.78;ReadPosRankSum=0.466;VQSLOD=3.4712;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:8,16:24:48.42:469,0,48	0/0:4,0:4:12.04:0,12,168	0/0:14,0:14:36.59:0,37,482	0/0:17,0:16:41.97:0,42,604	1/1:6,22:28:68.59:756,69,0	0/0:11,0:11:33.10:0,33,468	0/0:12,0:12:36.11:0,36,512	0/0:27,0:27:24.37:0,24,183	0/0:15,0:15:45.15:0,45,636	0/0:25,0:25:51.11:0,51,200	0/0:30,0:30:42.76:0,43,179	0/0:13,0:13:36.03:0,36,448	0/0:19,0:19:54.16:0,54,754	0/0:15,0:15:45.15:0,45,646	0/0:17,0:17:31.85:0,32,117	0/0:12,0:12:13.73:0,14,86	0/0:26,0:26:75.21:0,75,1052	0/0:12,0:12:26.35:0,26,122	0/1:11,9:20:24.78:339,0,25	0/1:6,15:21:0.16:497,0,0	0/1:6,4:10:11.46:129,0,11	0/0:25,0:25:72.24:0,72,1050	0/0:27,0:27:75.23:0,75,1066	0/0:16,0:16:45.05:0,45,570	0/0:15,0:15:7.44:0,7,67	0/1:10,5:15:27.62:230,0,28	0/1:5,12:17:2.94:398,0,3	1/1:4,3:7:14.98:147,15,0
chr10	44865379	.	G	GA	11453.37	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=3.524;DP=614;FS=2.209;HRun=6;HaplotypeScore=98.6401;InbreedingCoeff=0.9969;MQ=71.90;MQ0=0;MQRankSum=-2.771;QD=32.17;ReadPosRankSum=0.169;VQSLOD=4.2976;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,21:25:60.15:734,60,0	0/0:8,0:8:21.05:0,21,214	0/0:23,0:23:45.05:0,45,451	0/0:16,0:15:39.95:0,40,389	1/1:3,30:33:84.18:1021,84,0	0/0:21,0:21:57.13:0,57,582	0/0:10,0:10:27.06:0,27,276	1/1:4,26:30:78.13:872,78,0	0/0:22,0:22:66.15:0,66,673	1/1:3,31:34:90.29:1132,90,0	1/1:3,27:30:78.25:978,78,0	0/0:21,0:21:63.13:0,63,636	0/0:21,0:21:54.08:0,54,538	0/0:19,0:19:54.11:0,54,544	1/1:0,15:15:42.13:528,42,0	1/1:1,5:6:15.05:189,15,0	0/0:26,0:26:26.30:0,26,517	1/1:2,21:23:57.18:717,57,0	1/1:3,22:25:66.21:821,66,0	1/1:2,30:32:84.27:1057,84,0	1/1:1,12:13:36.12:453,36,0	0/0:22,0:22:66.15:0,66,673	0/0:24,0:24:63.14:0,63,642	0/0:25,0:25:72.16:0,72,735	1/1:1,16:17:42.13:528,42,0	1/1:5,20:25:60.19:755,60,0	1/1:4,26:30:81.21:990,81,0	1/1:0,18:18:54.17:679,54,0
chr10	44865705	.	A	ACT	8563.71	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=6.038;DP=607;FS=2.911;HRun=0;HaplotypeScore=108.4987;InbreedingCoeff=0.9952;MQ=60.43;MQ0=0;MQRankSum=-4.307;QD=44.60;ReadPosRankSum=1.013;VQSLOD=5.9308;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,16:16:39.13:690,39,0	0/0:5,0:5:15.05:0,15,210	0/0:25,0:22:60.19:0,60,817	0/0:23,0:22:62.75:0,63,828	1/1:3,31:34:87.30:1563,87,0	0/0:28,0:28:84.21:0,84,1119	0/0:10,0:10:21.07:0,21,294	0/0:19,0:19:51.17:0,51,714	0/0:20,0:20:57.19:0,57,798	0/0:29,0:29:78.25:0,78,1078	0/0:27,0:27:75.25:0,75,1041	0/0:10,0:10:27.09:0,27,378	0/0:22,0:22:66.22:0,66,924	0/0:17,0:17:48.16:0,48,672	0/0:16,0:16:48.16:0,48,672	0/0:12,0:12:33.10:0,33,445	0/0:32,0:31:87.23:0,87,1177	0/0:29,0:29:81.19:0,81,1074	1/1:3,10:12:23.66:401,24,0	1/1:3,32:35:90.31:1616,90,0	1/1:2,20:22:57.20:1026,57,0	0/0:26,0:26:75.21:0,75,999	0/0:29,0:29:78.26:0,78,1092	0/0:9,0:9:27.07:0,27,357	0/0:27,0:27:78.26:0,78,1093	1/1:4,29:33:45.26:1441,45,0	1/1:3,27:30:81.28:1451,81,0	1/1:1,7:8:21.07:375,21,0
chr10	44865805	.	A	AGTGAGAGAC	8829.90	PASS	AB=1.000;AC=18;AF=0.321;AN=56;BaseQRankSum=5.710;DP=532;FS=23.158;HRun=0;HaplotypeScore=198.7796;InbreedingCoeff=0.7821;MQ=79.53;MQ0=0;MQRankSum=-12.056;QD=67.92;ReadPosRankSum=1.460;VQSLOD=3.3595;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,8:10:24.08:1199,24,0	0/0:10,0:10:30.10:0,30,979	0/0:36,0:35:99:0,99,2780	0/0:31,0:31:87.22:0,87,2501	1/1:5,11:17:33.11:1466,33,0	0/0:33,0:33:99:0,99,3158	0/0:5,0:5:12.04:0,12,390	0/0:23,0:22:66.22:0,66,1981	0/0:16,0:16:45.11:0,45,1317	0/0:34,0:34:99:0,102,3140	0/0:34,0:34:99:0,99,3042	0/0:12,0:12:33.11:0,33,1076	0/0:27,0:27:81.28:0,81,2636	0/0:16,0:16:48.16:0,48,1518	0/0:15,0:15:45.14:0,45,1302	0/0:18,0:18:54.17:0,54,1644	0/0:14,0:14:42.12:0,42,1193	0/1:16,0:16:32.99:33,0,1100	1/1:1,3:3:9.01:327,9,0	1/1:7,8:16:30.10:1452,30,0	1/1:1,2:4:3.01:151,3,0	0/0:24,0:24:72.23:0,72,2102	0/0:32,0:32:96.31:0,96,2900	0/0:22,0:22:66.23:0,66,2152	0/1:21,0:21:39.25:39,0,1693	1/1:5,10:16:39.13:1873,39,0	1/1:9,12:21:39.10:1836,39,0	1/1:0,3:4:9.03:454,9,0
chr10	44866084	.	TA	T	2604.99	PASS	AB=0.873;AC=14;AF=0.259;AN=54;BaseQRankSum=5.734;DP=483;FS=7.094;HRun=11;HaplotypeScore=80.2972;InbreedingCoeff=0.6794;MQ=62.04;MQ0=0;MQRankSum=-0.552;QD=14.47;ReadPosRankSum=3.571;VQSLOD=4.0863;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:6:2.84:0,3,15	0/0:2,0:8:22.90:0,23,123	0/0:17,0:9:13.48:0,13,103	0/0:11,0:8:17.98:0,18,156	0/0:10,0:10:7.73:0,8,43	0/0:17,0:19:56.80:0,57,565	0/0:21,1:22:32.44:0,32,532	0/0:9,0:25:52.07:0,52,313	0/0:24,0:23:57.12:0,57,598	1/1:6,22:28:39.92:534,40,0	1/1:6,26:32:62.96:601,63,0	0/0:23,2:25:35.49:0,35,571	0/0:18,4:22:26.46:0,26,472	0/0:13,1:14:8.43:0,8,288	1/1:2,14:17:22.87:327,23,0	1/1:3,17:20:15.96:337,16,0	0/1:13,3:15:10.19:10,0,312	1/1:4,22:26:64.16:520,64,0	0/0:4,0:4:2.80:0,3,13	0/0:14,0:14:20.40:0,20,123	0/0:6,0:6:0:0,0,0	0/0:18,0:18:45.10:0,45,470	0/0:27,0:28:83.95:0,84,832	0/1:17,2:19:13.27:13,0,260	1/1:2,20:22:53.93:443,54,0	0/0:11,0:11:5.83:0,6,34	0/0:17,0:17:5.88:0,6,36	./.
chr10	44866757	.	C	CAAAA	2276.12	PASS	AB=1.000;AC=24;AF=0.480;AN=50;BaseQRankSum=-0.830;DP=298;FS=10.258;HRun=7;HaplotypeScore=74.5042;InbreedingCoeff=0.5703;MQ=71.10;MQ0=6;MQRankSum=-7.099;QD=14.88;ReadPosRankSum=-0.024;VQSLOD=-0.3951;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,0:2:5.04:33,5,0	0/0:6,0:6:12.03:0,12,179	0/0:34,0:16:32.69:0,33,382	0/1:23,0:10:0.61:1,0,121	1/1:16,0:15:3:27,3,0	0/1:16,0:16:17.85:131,0,18	0/1:9,0:9:28.31:35,0,28	0/0:10,0:10:18.03:0,18,233	0/0:11,0:11:21.02:0,21,285	1/1:8,7:13:27.09:522,27,0	1/1:13,6:17:35.47:729,35,0	0/0:9,0:9:5.86:0,6,79	0/0:6,0:6:9.02:0,9,127	0/0:15,0:15:23.98:0,24,332	1/1:3,3:6:18.06:356,18,0	./.	0/0:16,0:16:30.06:0,30,413	1/1:2,1:3:9.03:193,9,0	0/1:5,0:4:0:0,0,0	1/1:13,0:12:3.01:61,3,0	./.	0/0:9,0:9:15.02:0,15,227	0/0:18,0:18:20.21:0,20,324	0/0:3,0:3:4.83:0,5,52	1/1:3,5:8:15.05:311,15,0	1/1:9,0:9:3.01:46,3,0	./.	1/1:6,0:6:0.47:2,0,0
chr10	44866965	.	TC	T	2656.23	PASS	AB=0.591;AC=11;AF=0.196;AN=56;BaseQRankSum=11.093;DP=518;FS=2.080;HRun=2;HaplotypeScore=83.5836;InbreedingCoeff=0.8841;MQ=56.94;MQ0=6;MQRankSum=-0.186;QD=29.19;ReadPosRankSum=4.055;VQSLOD=3.4487;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:63.21:0,63,943	0/0:10,0:10:30.10:0,30,449	0/0:13,0:8:24.08:0,24,340	0/0:14,0:9:17.26:0,17,215	0/0:22,0:21:60.20:0,60,898	0/0:20,0:20:60.20:0,60,898	0/0:23,0:22:66.18:0,66,934	0/0:30,0:28:81.23:0,81,1187	0/0:16,0:16:48.16:0,48,719	1/1:1,23:22:63.18:767,63,0	1/1:1,22:20:56.12:690,56,0	0/0:14,0:14:39.13:0,39,582	0/0:18,0:18:54.18:0,54,807	0/0:18,0:18:54.17:0,54,788	1/1:0,17:17:51.16:624,51,0	1/1:0,5:5:15.05:186,15,0	0/0:17,0:17:48.15:0,48,699	0/1:4,9:13:13.93:306,0,14	0/0:18,0:12:36.11:0,36,520	0/0:24,0:24:63.21:0,63,941	0/0:22,0:22:63.20:0,63,924	0/0:22,0:22:63.21:0,63,943	0/0:22,0:22:66.21:0,66,965	0/0:23,0:23:66.21:0,66,969	1/1:0,9:8:21.07:259,21,0	0/0:21,1:22:25.66:0,26,825	0/0:23,0:23:66.22:0,66,985	0/0:13,0:13:30.10:0,30,449
chr10	44866989	.	G	GA	430.11	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-5.821;DP=540;FS=11.372;HRun=7;HaplotypeScore=80.9740;InbreedingCoeff=0.7618;MQ=51.71;MQ0=16;MQRankSum=-5.022;QD=13.03;ReadPosRankSum=-3.195;VQSLOD=1.3851;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:56.58:0,57,541	0/0:10,0:10:15.02:0,15,145	0/0:6,0:3:3:0,3,29	0/0:8,0:3:6.01:0,6,58	0/0:24,0:24:60.10:0,60,579	0/0:19,0:19:54.06:0,54,511	0/0:20,0:19:45.07:0,45,434	1/1:11,22:28:22.18:523,22,0	0/0:18,0:18:42.05:0,42,400	0/0:34,0:31:87.14:0,87,839	0/0:22,0:19:51.08:0,51,492	0/0:16,0:16:42.06:0,42,405	0/0:19,0:19:48.07:0,48,463	0/0:16,0:16:48.07:0,48,458	0/0:19,0:19:39.05:0,39,376	0/0:8,0:8:24.03:0,24,226	0/0:24,0:24:64.59:0,65,622	0/0:13,0:11:33.05:0,33,319	0/0:21,0:8:21.03:0,21,203	0/0:22,0:22:60.10:0,60,579	0/0:23,0:24:62.09:0,62,576	0/0:22,0:22:60.09:0,60,579	0/0:23,0:25:68.14:0,68,643	0/0:18,0:18:45.07:0,45,434	0/0:12,0:11:30.05:0,30,288	0/0:17,0:17:48.07:0,48,463	0/0:31,0:31:84.07:0,84,799	0/0:12,0:12:30.04:0,30,289
chr10	44867390	.	A	AT	5912.22	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=10.392;DP=509;FS=3.724;HRun=4;HaplotypeScore=62.9573;InbreedingCoeff=0.9718;MQ=68.62;MQ0=1;MQRankSum=-2.769;QD=33.21;ReadPosRankSum=-0.212;VQSLOD=5.2831;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,23:23:57.19:763,57,0	0/0:5,0:5:15.03:0,15,160	0/0:18,0:16:38.25:0,38,429	0/0:13,0:10:4.69:0,5,39	1/1:3,24:27:60.11:758,60,0	0/0:19,0:19:54.15:0,54,609	0/0:11,0:11:30.08:0,30,339	0/0:29,0:29:72.18:0,72,799	0/0:13,0:13:39.08:0,39,428	0/0:16,0:16:48.14:0,48,542	0/0:34,0:33:78.16:0,78,846	0/0:10,0:10:30.09:0,30,339	0/0:18,0:18:51.11:0,51,563	0/0:11,0:11:33.09:0,33,373	0/0:11,0:11:30.08:0,30,339	0/0:14,0:14:33.01:0,33,337	0/0:30,0:30:62.52:0,63,893	0/0:11,0:11:33.09:0,33,373	1/1:3,25:28:74.01:947,74,0	1/1:1,31:32:93.26:1195,93,0	1/1:0,5:5:15.05:201,15,0	0/0:15,0:15:36.09:0,36,397	0/0:21,0:21:45.11:0,45,498	0/0:9,0:9:27.07:0,27,298	0/0:23,0:23:54.09:0,54,577	1/1:1,23:24:35.21:814,35,0	1/1:2,28:30:69.23:918,69,0	1/1:0,9:9:24.08:316,24,0
chr10	44867791	.	G	GA	1600.45	PASS	AC=10;AF=0.200;AN=50;BaseQRankSum=6.627;DP=536;FS=117.414;HRun=3;HaplotypeScore=43.1955;InbreedingCoeff=0.7602;MQ=32.03;MQ0=60;MQRankSum=-7.197;QD=20.26;ReadPosRankSum=1.340;VQSLOD=-0.7303;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	0/0:10,0:10:15.05:0,15,180	0/0:11,0:3:6.02:0,6,72	0/0:11,0:5:12.04:0,12,144	1/1:5,19:22:36.08:481,36,0	0/0:26,0:14:3.01:0,3,36	0/0:25,0:6:6.02:0,6,72	0/0:28,0:13:36.11:0,36,432	0/0:28,0:16:21.06:0,21,252	0/0:25,0:12:33.10:0,33,396	0/0:30,0:25:36.11:0,36,432	0/0:20,1:8:6.02:0,6,72	0/0:31,0:15:18.06:0,18,216	0/0:28,0:18:30.09:0,30,360	0/0:25,0:15:21.06:0,21,252	0/0:12,0:3:6.02:0,6,72	0/0:24,0:21:6.02:0,6,72	0/0:23,0:17:6.02:0,6,72	./.	1/1:6,23:26:63.08:815,63,0	./.	0/0:19,0:17:21.06:0,21,252	0/0:19,0:17:33.10:0,33,394	0/0:26,0:16:8.98:0,9,92	0/0:14,0:11:18.06:0,18,216	1/1:4,6:6:18.06:252,18,0	1/1:7,3:4:9.03:126,9,0	1/1:4,2:2:6.02:84,6,0
chr10	44868045	.	C	CT	1308.52	PASS	AB=0.615;AC=17;AF=0.425;AN=40;BaseQRankSum=-0.371;DP=358;FS=4.557;HRun=1;HaplotypeScore=37.9302;InbreedingCoeff=0.7871;MQ=49.60;MQ0=26;MQRankSum=-8.203;QD=13.35;ReadPosRankSum=-2.563;VQSLOD=1.5737;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/0:15,0:15:24.04:0,24,293	1/1:15,0:3:3.01:31,3,0	./.	./.	0/0:23,0:23:54.16:0,54,686	0/0:19,0:18:48.11:0,48,603	1/1:9,7:9:18.02:244,18,0	0/0:27,0:27:66.21:0,66,856	1/1:3,8:6:15.02:201,15,0	1/1:1,9:7:5.98:65,6,0	0/0:21,0:21:48.15:0,48,610	0/0:22,0:22:45.13:0,45,568	0/0:27,0:27:57.17:0,57,725	1/1:0,13:10:21.07:313,21,0	1/1:1,15:15:27.09:403,27,0	0/0:25,0:23:57.17:0,57,725	1/1:1,7:7:9.03:135,9,0	./.	./.	./.	0/0:15,0:13:23.77:0,24,278	0/0:24,0:22:48.12:0,48,603	0/0:22,0:22:57.19:0,57,739	0/1:3,5:3:32.73:39,0,33	1/1:0,1:1:3.01:45,3,0	./.	./.
chr10	44868921	.	G	GTA	5365.11	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=12.022;DP=440;FS=22.080;HRun=0;HaplotypeScore=90.7811;InbreedingCoeff=0.9762;MQ=65.72;MQ0=0;MQRankSum=-8.270;QD=49.68;ReadPosRankSum=0.435;VQSLOD=3.6429;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,14:15:45.11:856,45,0	0/0:6,0:6:18.06:0,18,293	0/0:10,0:10:5.75:0,6,284	0/0:10,0:9:14.47:0,14,175	1/1:2,13:13:30.10:597,30,0	0/0:11,0:11:33.08:0,33,489	0/0:13,0:13:39.08:0,39,528	0/0:24,0:24:69.17:0,69,988	0/0:18,0:18:54.18:0,54,880	0/0:16,0:16:45.15:0,45,714	0/0:27,0:27:80.44:0,80,1206	0/0:12,0:12:36.12:0,36,587	0/0:21,0:21:63.22:0,63,1025	0/0:16,0:16:48.16:0,48,779	0/0:19,0:19:54.18:0,54,880	0/0:15,0:15:45.15:0,45,733	0/0:24,0:24:72.21:0,72,1122	0/0:8,0:8:24.08:0,24,391	1/1:2,13:12:36.12:728,36,0	1/1:0,12:13:36.12:726,36,0	1/1:5,9:14:36.01:564,36,0	0/0:18,0:18:54.18:0,54,859	0/0:31,0:31:90.24:0,90,1389	0/0:18,0:18:48.08:0,48,728	0/0:15,0:15:45.15:0,45,733	1/1:0,11:11:33.11:668,33,0	1/1:3,12:15:45.05:802,45,0	1/1:2,7:9:21.07:425,21,0
chr10	44868966	.	T	TC	4720.64	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=10.564;DP=493;FS=6.287;HRun=4;HaplotypeScore=97.8027;InbreedingCoeff=0.9582;MQ=53.79;MQ0=2;MQRankSum=-7.542;QD=30.85;ReadPosRankSum=0.369;VQSLOD=4.7534;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,22:24:60.15:778,60,0	0/0:6,0:6:15.03:0,15,160	0/0:12,0:9:21.06:0,21,238	0/0:16,0:14:15.04:0,15,170	1/1:4,26:28:69.23:922,69,0	0/0:10,0:10:30.09:0,30,340	0/0:16,0:16:45.13:0,45,510	0/0:31,0:31:90.22:0,90,996	0/0:22,0:22:37.59:0,38,624	0/0:19,0:19:57.16:0,57,647	0/0:29,0:29:87.24:0,87,978	0/0:11,0:11:30.09:0,30,340	0/0:15,0:15:42.10:0,42,467	0/0:12,0:12:33.09:0,33,374	0/0:21,0:21:54.12:0,54,592	0/0:17,0:17:50.15:0,50,539	0/0:23,0:23:66.19:0,66,748	0/0:12,0:12:30.08:0,30,340	1/1:3,10:11:30.10:401,30,0	1/1:1,29:30:81.27:1086,81,0	1/1:2,11:12:21.07:282,21,0	0/0:13,0:13:36.09:0,36,399	0/0:30,0:30:81.21:0,81,909	0/0:11,0:11:22.88:0,23,244	0/0:14,0:14:39.11:0,39,442	1/1:1,11:12:2.08:407,2,0	1/1:5,12:17:36.12:481,36,0	1/1:4,9:13:27.09:363,27,0
chr10	44869132	.	TGATAAA	T	4049.37	PASS	AB=0.563;AC=15;AF=0.268;AN=56;BaseQRankSum=12.236;DP=463;FS=3.628;HRun=0;HaplotypeScore=134.6113;InbreedingCoeff=0.9065;MQ=55.16;MQ0=4;MQRankSum=-11.374;QD=38.20;ReadPosRankSum=0.302;VQSLOD=3.3539;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,12:19:32.53:531,33,0	0/0:5,0:5:15.05:0,15,275	0/0:15,0:9:18.03:0,18,579	0/0:10,0:9:24:0,24,512	1/1:0,17:17:26.54:565,27,0	0/0:22,0:22:66.21:0,66,2188	0/0:11,0:11:33.11:0,33,1225	0/0:28,0:27:79.50:0,79,2335	0/0:21,0:21:60.21:0,60,1519	0/0:32,0:32:91.76:0,92,1082	0/0:17,0:17:48.11:0,48,603	0/0:15,0:15:42.14:0,42,997	0/0:18,0:18:48.16:0,48,1213	0/0:18,0:18:54.19:0,54,1342	0/0:16,0:16:48.12:0,48,553	0/0:17,0:17:48.12:0,48,583	0/0:28,0:27:72.25:0,72,1323	0/0:14,0:14:33.08:0,33,382	1/1:3,4:6:15.04:275,15,0	1/1:1,20:22:52.53:1048,53,0	1/1:1,8:9:12.04:241,12,0	0/0:18,0:18:51.15:0,51,1165	0/0:28,0:28:84.29:0,84,2028	0/0:11,0:11:33.11:0,33,842	0/0:13,0:13:36.08:0,36,388	0/1:2,7:9:3.40:390,0,3	1/1:2,19:21:44.64:875,45,0	1/1:0,2:2:6.02:125,6,0
chr10	44869135	.	TA	T	3477.30	PASS	AB=0.789;AC=46;AF=0.821;AN=56;BaseQRankSum=7.987;DP=450;FS=0.000;HRun=11;HaplotypeScore=94.3682;InbreedingCoeff=0.6935;MQ=55.40;MQ0=4;MQRankSum=-1.233;QD=9.15;ReadPosRankSum=4.132;VQSLOD=2.7394;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:18:13.48:40,13,0	1/1:0,0:5:10.19:29,10,0	0/0:11,0:8:12.02:0,12,122	0/1:9,0:8:9.29:9,0,104	1/1:17,0:17:18.32:55,18,0	0/0:22,0:22:54.12:0,54,567	0/0:11,0:11:33.08:0,33,352	0/0:26,0:25:54.60:0,55,569	1/1:1,20:21:56.92:468,57,0	1/1:5,0:30:50.13:146,50,0	1/1:2,0:16:24.43:72,24,0	1/1:3,12:15:32.96:271,33,0	1/1:1,17:18:44.94:369,45,0	1/1:2,16:19:18:343,18,0	1/1:2,0:15:26.48:78,26,0	1/1:2,0:17:28.51:84,29,0	1/1:4,0:27:38.69:112,39,0	1/1:2,0:15:20.31:60,20,0	1/1:6,0:5:8.15:24,8,0	1/1:21,0:22:30.36:93,30,0	1/1:9,0:9:2.68:12,3,0	1/1:4,13:17:35.92:293,36,0	1/1:4,25:29:68.64:566,69,0	0/1:3,8:11:5.02:170,0,5	1/1:1,0:12:20.37:60,20,0	1/1:8,0:8:12.22:36,12,0	1/1:21,0:21:24.03:74,24,0	1/1:2,0:2:4.07:12,4,0
chr10	44870033	.	A	ACCC	6663.53	PASS	AB=0.538;AC=15;AF=0.268;AN=56;BaseQRankSum=16.844;DP=620;FS=14.721;HRun=1;HaplotypeScore=132.2181;InbreedingCoeff=0.9055;MQ=66.24;MQ0=1;MQRankSum=-9.634;QD=44.42;ReadPosRankSum=2.818;VQSLOD=3.5409;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,31:32:75.14:1297,75,0	0/0:11,0:11:33.11:0,33,615	0/0:31,0:25:65.26:0,65,1121	0/0:27,0:24:69.24:0,69,1252	1/1:0,18:18:32.46:653,32,0	0/0:30,0:30:90.30:0,90,1648	0/0:11,0:11:33.07:0,33,579	0/0:34,0:34:96.33:0,96,1781	0/0:26,0:26:75.24:0,75,1333	0/0:23,0:23:69.22:0,69,1232	0/0:27,0:27:81.28:0,81,1510	0/0:24,0:24:72.22:0,72,1280	0/0:29,0:29:87.27:0,87,1554	0/0:18,0:18:54.19:0,54,1000	0/0:21,0:21:63.21:0,63,1145	0/0:15,0:15:45.15:0,45,839	0/0:27,0:26:81.28:0,81,1503	0/0:13,0:13:36.10:0,36,627	1/1:1,7:8:24.07:455,24,0	1/1:0,22:27:75.07:1173,75,0	1/1:1,18:19:48:825,48,0	0/0:22,0:22:63.22:0,63,1168	0/0:28,0:28:84.28:0,84,1513	0/0:27,0:27:78.22:0,78,1418	0/0:25,0:25:75.26:0,75,1398	0/1:3,18:21:48.68:970,0,49	1/1:0,18:18:57.19:1026,57,0	1/1:1,5:6:15.05:264,15,0
chr10	44870034	.	ATG	A	3719.29	PASS	AB=0.538;AC=15;AF=0.268;AN=56;BaseQRankSum=16.472;DP=624;FS=13.938;HRun=0;HaplotypeScore=130.4985;InbreedingCoeff=0.9042;MQ=65.42;MQ0=1;MQRankSum=-10.127;QD=24.80;ReadPosRankSum=3.708;VQSLOD=4.3157;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,31:33:65.18:804,65,0	0/0:11,0:11:33.11:0,33,660	0/0:33,0:25:72.12:0,72,1333	0/0:26,0:23:66.23:0,66,1282	1/1:0,18:18:34.26:394,34,0	0/0:30,0:30:90.31:0,90,1794	0/0:12,0:12:36.12:0,36,702	0/0:35,0:35:99:0,105,2093	0/0:25,0:25:75.24:0,75,1451	0/0:26,0:26:78.27:0,78,1526	0/0:27,0:27:81.28:0,81,1609	0/0:24,0:24:72.25:0,72,1427	0/0:28,0:28:84.26:0,84,1640	0/0:18,0:18:54.16:0,54,1042	0/0:21,0:21:63.22:0,63,1258	0/0:16,0:16:48.16:0,48,940	0/0:27,0:26:78.27:0,78,1558	0/0:13,0:13:36.10:0,36,679	1/1:0,7:7:21.04:260,21,0	1/1:5,22:27:46.81:564,47,0	1/1:1,18:19:20.15:451,20,0	0/0:22,0:22:63.22:0,63,1257	0/0:28,0:28:84.25:0,84,1598	0/0:27,0:27:78.27:0,78,1529	0/0:25,0:25:75.26:0,75,1499	0/1:3,18:21:56.93:530,0,57	1/1:1,18:19:56.92:572,57,0	1/1:1,5:6:15:144,15,0
chr10	44870246	.	TAA	T	2968.68	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=13.345;DP=544;FS=4.396;HRun=11;HaplotypeScore=118.0776;InbreedingCoeff=0.9619;MQ=62.33;MQ0=7;MQRankSum=-11.793;QD=20.47;ReadPosRankSum=-0.111;VQSLOD=2.7110;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,10:16:29.63:279,30,0	0/0:3,0:12:24.04:0,24,232	0/0:33,0:15:18.83:0,19,349	0/0:19,0:13:17.96:0,18,169	1/1:1,19:20:45.11:476,45,0	0/0:25,0:25:69.21:0,69,1034	0/0:20,0:20:48.16:0,48,739	0/0:21,0:22:41.70:0,42,403	0/0:19,0:20:51.15:0,51,745	0/0:20,0:20:56.90:0,57,482	0/0:23,0:23:69.05:0,69,645	0/0:11,0:11:33.11:0,33,508	0/0:17,0:17:48.16:0,48,728	0/0:12,0:13:33.11:0,33,487	0/0:21,0:21:57.04:0,57,524	0/0:18,0:18:50.99:0,51,459	0/0:4,0:27:60.10:0,60,592	0/0:14,0:14:35.99:0,36,345	1/1:0,13:12:33.08:351,33,0	1/1:11,28:39:78.05:813,78,0	1/1:0,1:1:3.01:32,3,0	0/0:26,0:28:75.34:0,75,1094	0/0:14,0:16:41.61:0,42,571	0/0:19,0:21:59.17:0,59,845	0/0:17,0:17:39.01:0,39,351	1/1:8,18:26:30.82:548,31,0	1/1:3,18:21:51.12:543,51,0	1/1:2,7:9:12.03:127,12,0
chr10	44870843	.	G	GC	3124.40	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=13.369;DP=385;FS=0.426;HRun=5;HaplotypeScore=73.0993;InbreedingCoeff=0.9327;MQ=57.37;MQ0=6;MQRankSum=-8.871;QD=17.17;ReadPosRankSum=0.592;VQSLOD=3.2055;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:23:47.88:414,48,0	0/0:4,0:4:9.02:0,9,97	0/0:9,0:8:20.99:0,21,205	0/0:8,0:7:15.51:0,16,162	1/1:15,0:15:20.93:167,21,0	0/0:19,0:19:51.09:0,51,535	0/0:23,0:22:60.06:0,60,613	0/0:20,0:18:39.04:0,39,393	0/0:16,0:16:39.06:0,39,402	1/1:1,6:7:20.94:187,21,0	1/1:0,9:9:26.96:284,27,0	0/0:11,0:11:33.08:0,33,354	0/0:12,0:12:32.57:0,33,345	0/0:20,0:20:51.08:0,51,523	1/1:3,10:13:32.90:321,33,0	1/1:1,4:5:11.95:116,12,0	0/0:26,0:25:66.13:0,66,697	1/1:5,11:16:22.48:415,22,0	1/1:15,0:12:26.62:173,27,0	1/1:12,0:12:0.48:188,0,0	1/1:29,0:27:59.60:462,60,0	0/0:12,0:12:33.07:0,33,345	0/0:6,0:6:12.02:0,12,123	0/0:17,0:16:45.11:0,45,482	1/1:1,5:6:12.01:127,12,0	1/1:10,3:12:26.83:205,27,0	1/1:12,0:10:26.93:219,27,0	1/1:5,0:5:8.97:71,9,0
chr10	44870848	.	C	CA	4050.66	PASS	AB=0.841;AC=25;AF=0.446;AN=56;BaseQRankSum=11.883;DP=372;FS=1.374;HRun=0;HaplotypeScore=72.2654;InbreedingCoeff=0.7316;MQ=59.75;MQ0=3;MQRankSum=-8.067;QD=23.97;ReadPosRankSum=2.273;VQSLOD=4.5912;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,22:22:48.16:721,48,0	0/0:4,0:4:11.77:0,12,137	0/0:12,0:11:20.07:0,20,276	0/0:10,0:9:18.53:0,19,238	1/1:1,14:15:21.07:327,21,0	0/0:20,0:20:57.13:0,57,736	0/0:22,0:21:63.19:0,63,834	0/0:18,0:17:45.06:0,45,565	0/0:14,0:14:42.07:0,42,542	0/1:9,0:9:22.14:54,0,22	1/1:10,0:10:21:100,21,0	0/0:11,0:11:33.11:0,33,457	0/0:12,0:12:32.60:0,33,432	0/0:18,0:18:51.14:0,51,664	1/1:11,0:11:13.53:95,14,0	1/1:4,0:4:10.08:41,10,0	0/0:24,0:23:72.14:0,72,954	0/1:15,0:15:10.94:103,0,11	1/1:1,10:10:27.09:418,27,0	0/1:1,10:12:8.62:408,0,9	1/1:1,26:26:60.20:867,60,0	0/0:16,0:16:41.87:0,42,496	0/0:5,0:5:12.04:0,12,167	0/0:17,0:17:51.07:0,51,660	1/1:7,0:7:0.14:38,0,0	1/1:5,7:11:26.30:316,26,0	1/1:0,10:10:27.09:421,27,0	1/1:0,4:4:9.03:140,9,0
chr10	44870851	.	GAA	G	1653.96	PASS	AB=0.662;AC=12;AF=0.214;AN=56;BaseQRankSum=4.758;DP=377;FS=0.560;HRun=4;HaplotypeScore=86.3492;InbreedingCoeff=0.7623;MQ=59.84;MQ0=2;MQRankSum=-3.983;QD=25.45;ReadPosRankSum=0.937;VQSLOD=1.8650;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:50.96:0,51,653	0/0:4,0:4:12.03:0,12,195	0/0:12,0:11:30.08:0,30,515	0/0:12,0:11:24.90:0,25,484	0/0:15,0:15:20.96:0,21,314	0/0:19,0:19:57.20:0,57,1061	0/0:21,0:20:60.21:0,60,1124	0/0:17,0:16:42.14:0,42,781	0/0:15,0:15:45.15:0,45,830	1/1:0,8:8:24.06:286,24,0	1/1:0,10:10:21.06:281,21,0	0/0:13,0:13:36.12:0,36,663	0/0:12,0:12:33.58:0,34,614	0/0:19,0:19:48.16:0,48,851	1/1:1,10:11:27.08:346,27,0	1/1:0,4:4:12.04:157,12,0	0/0:27,0:26:75.22:0,75,1342	0/1:2,12:14:11.71:475,0,12	0/0:11,0:10:25.64:0,26,423	0/0:13,0:13:36.07:0,36,554	0/0:27,0:26:62.54:0,63,803	0/0:17,0:17:45.11:0,45,806	0/0:4,0:4:12.04:0,12,225	0/0:18,0:18:51.17:0,51,955	1/1:1,5:7:18.05:229,18,0	0/1:8,3:11:59.77:60,0,273	0/0:10,0:10:27.05:0,27,412	0/0:4,0:4:9.03:0,9,148
chr10	44870905	.	GCC	G	1667.71	PASS	AC=20;AF=0.417;AN=48;BaseQRankSum=5.656;DP=280;FS=2.775;HRun=10;HaplotypeScore=49.3579;InbreedingCoeff=0.8643;MQ=53.30;MQ0=4;MQRankSum=-4.095;QD=18.33;ReadPosRankSum=2.150;VQSLOD=1.7979;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	0/0:1,0:4:4.99:0,5,17	0/0:13,0:5:15.05:0,15,233	0/0:17,0:12:20.33:0,20,223	./.	0/0:14,0:15:29.54:0,30,349	0/0:9,0:11:26.56:0,27,381	0/0:14,0:14:20.95:0,21,254	0/0:15,0:15:42.14:0,42,660	1/1:1,13:14:36.07:401,36,0	1/1:2,7:9:15.04:166,15,0	0/0:8,0:8:18.06:0,18,284	0/0:8,0:10:29.07:0,29,384	0/0:14,0:15:41.63:0,42,621	1/1:2,6:8:18.05:201,18,0	1/1:1,11:12:33.07:358,33,0	0/0:18,0:16:45.14:0,45,685	1/1:1,14:15:42.11:468,42,0	./.	1/1:0,0:1:2.74:12,3,0	1/1:5,0:12:13.72:60,14,0	0/0:8,0:8:15.05:0,15,224	0/0:3,0:4:6:0,6,53	0/0:12,0:12:36.07:0,36,520	1/1:2,4:6:12.02:134,12,0	1/1:4,1:6:3:33,3,0	1/1:2,0:5:5.49:24,5,0	./.
chr10	44870935	.	G	GA	180.92	PASS	AC=14;AF=0.259;AN=54;BaseQRankSum=6.958;DP=312;FS=8.161;HRun=1;HaplotypeScore=45.5527;InbreedingCoeff=0.8514;MQ=51.45;MQ0=19;MQRankSum=-6.734;QD=3.17;ReadPosRankSum=0.013;VQSLOD=-0.7110;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,7:8:8.38:39,8,0	0/0:4,0:4:9.03:0,9,126	0/0:13,0:5:12.04:0,12,158	0/0:19,0:11:20.96:0,21,282	1/1:3,5:8:2.60:10,3,0	0/0:13,0:12:30.10:0,30,416	0/0:16,0:15:45.13:0,45,611	0/0:18,0:11:33.11:0,33,455	0/0:9,0:9:21.07:0,21,291	0/0:13,0:12:36.11:0,36,489	0/0:7,0:7:21.07:0,21,294	0/0:9,0:9:24.08:0,24,336	0/0:11,0:11:33.11:0,33,461	0/0:17,0:17:45.11:0,45,594	0/0:8,0:8:21.07:0,21,293	0/0:12,0:12:33.11:0,33,461	0/0:19,0:18:51.17:0,51,713	0/0:17,0:17:45.15:0,45,626	./.	1/1:2,1:3:2.68:11,3,0	1/1:7,11:15:8.23:36,8,0	0/0:9,0:8:17.79:0,18,251	0/0:8,0:8:21.07:0,21,293	0/0:16,0:16:42.14:0,42,587	0/0:8,0:8:21.07:0,21,294	1/1:2,7:8:17.80:151,18,0	1/1:1,4:5:11.38:58,11,0	1/1:0,3:3:5.93:40,6,0
chr10	44871673	.	TG	T	2357.62	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=11.810;DP=601;FS=3.600;HRun=2;HaplotypeScore=72.0670;InbreedingCoeff=0.9863;MQ=65.44;MQ0=16;MQRankSum=-8.827;QD=18.42;ReadPosRankSum=-0.084;VQSLOD=3.6553;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:0,25:22:33.11:426,33,0	0/0:14,0:14:42.09:0,42,549	0/0:27,0:18:44.10:0,44,590	0/0:14,0:10:21.07:0,21,311	1/1:0,16:12:23.97:264,24,0	0/0:21,0:21:57.10:0,57,805	0/0:17,0:17:51.15:0,51,725	0/0:29,0:29:87.25:0,87,1221	0/0:34,0:34:99:0,102,1447	0/0:38,0:37:99:0,111,1558	0/0:26,0:26:75.25:0,75,1120	0/0:32,0:32:90.23:0,90,1237	0/0:20,0:20:60.18:0,60,863	0/0:21,0:21:60.19:0,60,877	0/0:24,0:24:72.22:0,72,1030	0/0:16,0:16:42.07:0,42,560	0/0:12,0:12:36.12:0,36,538	0/0:22,0:22:56.51:0,57,754	1/1:1,7:7:18.06:232,18,0	1/1:1,22:16:33.11:423,33,0	1/1:2,21:19:39.08:484,39,0	0/0:19,0:19:54.16:0,54,768	0/0:20,0:20:51.02:0,51,630	0/0:44,0:44:99:0,129,1867	0/0:23,0:23:69.20:0,69,971	1/1:1,14:12:30.10:386,30,0	1/1:0,14:10:18.06:231,18,0	1/1:0,4:4:9.03:116,9,0
chr10	44872788	.	C	CA	34.14	PASS	AC=4;AF=0.091;AN=44;BaseQRankSum=2.767;DP=506;FS=1.996;HRun=2;HaplotypeScore=75.2214;InbreedingCoeff=0.8317;MQ=63.42;MQ0=5;MQRankSum=-1.522;QD=2.63;ReadPosRankSum=0.843;VQSLOD=-0.3697;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	0/0:11,0:11:30.09:0,30,361	0/0:22,0:22:24.34:0,24,700	0/0:25,0:21:63.10:0,63,726	1/1:2,2:1:3.01:43,3,0	0/0:29,0:29:87.17:0,87,1030	0/0:20,0:19:57.15:0,57,689	0/0:28,0:24:63.20:0,63,781	0/0:21,0:21:60.19:0,60,744	0/0:30,0:30:84.25:0,84,1020	0/0:33,0:32:63.09:0,63,779	0/0:21,0:21:57.18:0,57,705	0/0:27,0:27:72.23:0,72,892	0/0:29,0:28:78.23:0,78,954	0/0:18,0:18:48.15:0,48,595	0/0:22,0:22:60.19:0,60,743	0/0:24,0:24:63.20:0,63,781	0/0:16,0:16:42.06:0,42,501	./.	./.	./.	0/0:35,0:35:93.26:0,93,1126	0/0:21,0:21:51.12:0,51,631	0/0:34,0:34:96.30:0,96,1190	0/0:19,0:19:51.07:0,51,607	./.	1/1:0,9:3:6.02:86,6,0	./.
chr10	44873447	.	AC	A	1447.41	PASS	AB=0.571;AC=15;AF=0.288;AN=52;BaseQRankSum=6.183;DP=561;FS=8.899;HRun=1;HaplotypeScore=49.6927;InbreedingCoeff=0.8642;MQ=44.42;MQ0=61;MQRankSum=-7.297;QD=11.40;ReadPosRankSum=2.545;VQSLOD=1.3512;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,8:6:9.03:125,9,0	0/0:5,0:5:15.05:0,15,240	./.	./.	1/1:0,17:7:9.03:125,9,0	0/0:33,0:33:84.29:0,84,1326	0/0:17,0:17:30.10:0,30,478	0/0:32,0:20:60.20:0,60,954	0/0:23,0:22:66.21:0,66,1031	0/0:31,0:29:87.29:0,87,1366	0/0:23,0:23:54.18:0,54,846	0/0:30,0:30:78.24:0,78,1198	0/0:19,0:18:51.16:0,51,790	0/0:23,0:21:57.16:0,57,855	0/0:18,0:18:30.10:0,30,465	0/0:15,0:13:24.08:0,24,380	0/0:22,0:20:45.15:0,45,704	0/0:21,0:19:45.15:0,45,719	1/1:3,9:8:18.06:251,18,0	1/1:2,22:13:15.03:191,15,0	1/1:0,16:15:21.07:293,21,0	0/0:20,0:19:47.95:0,48,765	0/0:19,0:17:36.12:0,36,575	0/0:9,0:9:27.09:0,27,431	0/0:21,0:19:54.17:0,54,830	0/1:3,9:8:74.84:188,0,75	1/1:1,14:10:9.03:125,9,0	1/1:0,22:17:24.08:335,24,0
chr10	44873616	.	GA	G	1181.52	PASS	AB=0.533;AC=15;AF=0.268;AN=56;BaseQRankSum=7.157;DP=465;FS=0.675;HRun=1;HaplotypeScore=59.5823;InbreedingCoeff=0.7751;MQ=49.04;MQ0=11;MQRankSum=-6.326;QD=17.90;ReadPosRankSum=-0.618;VQSLOD=3.5633;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,14:12:5.02:235,5,0	0/0:7,0:7:14.63:0,15,239	0/0:18,0:4:9.03:0,9,145	0/0:19,0:2:6.02:0,6,91	1/1:0,6:3:9.03:125,9,0	0/0:27,0:27:78.27:0,78,1244	0/0:18,0:16:30.10:0,30,479	0/0:26,0:7:12.04:0,12,192	0/0:27,0:26:78.27:0,78,1247	0/0:28,0:28:84.29:0,84,1335	0/0:27,0:23:39.13:0,39,622	0/0:25,0:25:75.24:0,75,1176	0/0:16,0:16:40.38:0,40,624	0/0:16,0:15:45.13:0,45,675	0/0:17,0:17:27.08:0,27,409	0/0:12,0:12:24.07:0,24,360	0/0:20,0:18:45.15:0,45,716	0/0:11,0:11:27.09:0,27,432	1/1:0,4:2:6.02:84,6,0	1/1:0,11:8:24.08:333,24,0	1/1:0,4:3:6.02:84,6,0	0/0:24,0:24:72.25:0,72,1149	0/0:27,0:27:78.23:0,78,1216	0/0:21,0:21:57.18:0,57,887	0/0:13,0:10:18.06:0,18,286	0/1:1,7:7:26.92:229,0,27	1/1:0,11:9:15.01:186,15,0	1/1:1,3:3:6.02:84,6,0
chr10	44873781	.	T	TG	598.75	PASS	AC=10;AF=0.200;AN=50;BaseQRankSum=8.052;DP=462;FS=41.684;HRun=2;HaplotypeScore=54.3019;InbreedingCoeff=0.8785;MQ=47.27;MQ0=17;MQRankSum=-7.604;QD=18.14;ReadPosRankSum=1.075;VQSLOD=1.3593;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	0/0:11,0:11:21.07:0,21,260	0/0:13,0:2:6.02:0,6,74	0/0:19,0:2:6.02:0,6,74	1/1:3,7:4:8.82:100,9,0	0/0:26,0:23:57.18:0,57,706	0/0:21,0:17:42.12:0,42,505	0/0:14,0:7:21.07:0,21,260	0/0:17,0:17:45.11:0,45,542	0/0:40,0:32:93.29:0,93,1143	0/0:30,0:30:42.13:0,42,521	0/0:23,0:23:57.18:0,57,705	0/0:19,0:19:32.37:0,32,495	0/0:16,0:16:39.12:0,39,483	0/0:17,0:14:30.09:0,30,371	0/0:10,0:9:18.06:0,18,223	0/0:24,0:23:60.15:0,60,715	0/0:14,0:13:13.99:0,14,250	./.	1/1:0,5:2:6.02:86,6,0	./.	0/0:24,0:24:37.54:0,38,582	0/0:28,0:26:60.17:0,60,730	0/0:23,0:23:15.75:0,16,625	0/0:29,0:26:39.12:0,39,483	1/1:3,5:7:17.27:222,17,0	1/1:0,4:3:9.03:129,9,0	1/1:0,5:5:15.05:216,15,0
chr10	44874972	.	AT	A	1096.64	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-0.129;DP=626;FS=0.698;HRun=1;HaplotypeScore=81.4479;InbreedingCoeff=0.9998;MQ=74.98;MQ0=0;MQRankSum=-0.181;QD=36.55;ReadPosRankSum=-4.099;VQSLOD=2.3933;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:63.17:0,63,979	0/0:16,0:16:48.14:0,48,739	0/0:26,0:26:73.31:0,73,1026	0/0:19,0:19:54.15:0,54,801	0/0:27,0:27:72.25:0,72,1151	0/0:24,0:24:72.25:0,72,1147	0/0:13,0:13:39.11:0,39,599	1/1:0,30:30:87.26:1192,87,0	0/0:25,0:25:75.24:0,75,1168	0/0:27,0:27:81.28:0,81,1292	0/0:31,0:31:93.30:0,93,1461	0/0:23,0:23:69.24:0,69,1103	0/0:16,0:16:48.13:0,48,717	0/0:18,0:18:54.18:0,54,859	0/0:26,0:26:78.25:0,78,1224	0/0:15,0:15:45.14:0,45,696	0/0:21,0:21:63.21:0,63,999	0/0:13,0:13:39.13:0,39,615	0/0:19,0:19:57.19:0,57,881	0/0:32,0:32:93.32:0,93,1483	0/0:22,0:22:66.23:0,66,1053	0/0:21,0:21:63.21:0,63,1002	0/0:24,0:24:72.25:0,72,1149	0/0:15,0:15:45.15:0,45,715	0/0:21,0:21:63.21:0,63,1007	0/0:22,0:22:63.21:0,63,1006	0/0:39,0:37:99:0,117,1843	0/0:19,0:19:57.19:0,57,909
chr10	44875448	.	TA	T	6543.52	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=17.124;DP=523;FS=0.000;HRun=1;HaplotypeScore=71.9261;InbreedingCoeff=0.9888;MQ=70.31;MQ0=0;MQRankSum=-3.646;QD=39.18;ReadPosRankSum=1.464;VQSLOD=5.4428;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,11:12:33.04:437,33,0	0/0:7,0:7:21.07:0,21,336	0/0:15,0:15:45.13:0,45,690	0/0:23,0:23:66.22:0,66,1040	1/1:0,32:32:84.28:1174,84,0	0/0:27,0:27:78.27:0,78,1247	0/0:14,0:14:42.13:0,42,648	0/0:25,0:25:72.22:0,72,1118	0/0:25,0:25:75.21:0,75,1121	0/0:27,0:27:81.28:0,81,1296	0/0:21,0:21:63.21:0,63,1007	0/0:10,0:10:30.10:0,30,478	0/0:16,0:16:48.16:0,48,760	0/0:18,0:18:54.18:0,54,863	0/0:8,0:8:24.08:0,24,384	0/0:17,0:17:51.16:0,51,792	0/0:14,0:14:36.12:0,36,575	0/0:11,0:11:27.09:0,27,419	1/1:0,23:23:69.22:948,69,0	1/1:0,28:28:78.26:1090,78,0	1/1:0,13:13:33.11:461,33,0	0/0:14,0:14:42.13:0,42,649	0/0:33,0:33:99:0,99,1560	0/0:12,0:12:36.12:0,36,576	0/0:19,0:18:57.19:0,57,911	1/1:0,30:30:90.30:1259,90,0	1/1:0,26:26:75.25:1049,75,0	1/1:0,3:3:9.03:126,9,0
chr10	44875583	.	A	AG	7688.64	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=17.870;DP=541;FS=1.931;HRun=0;HaplotypeScore=109.3276;InbreedingCoeff=0.9957;MQ=74.73;MQ0=0;MQRankSum=-2.549;QD=40.25;ReadPosRankSum=-0.206;VQSLOD=4.5483;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,22:22:66.22:985,66,0	0/0:9,0:9:27.07:0,27,347	0/0:13,0:13:39.03:0,39,503	0/0:12,0:12:30.09:0,30,400	1/1:0,24:24:69.08:974,69,0	0/0:20,0:20:54.14:0,54,691	0/0:15,0:15:45.15:0,45,629	0/0:26,0:26:78.22:0,78,1017	0/0:19,0:19:57.19:0,57,793	0/0:33,0:33:96.30:0,96,1289	0/0:29,0:29:84.26:0,84,1141	0/0:11,0:11:33.10:0,33,447	0/0:26,0:26:78.22:0,78,1038	0/0:21,0:21:63.20:0,63,863	0/0:10,0:10:30.09:0,30,403	0/0:12,0:12:36.12:0,36,503	0/0:9,0:9:27.09:0,27,377	0/0:18,0:18:54.11:0,54,694	1/1:8,15:23:63.15:855,63,0	1/1:1,48:49:99:1940,132,0	1/1:0,10:10:24.08:359,24,0	0/0:17,0:17:51.16:0,51,696	0/0:23,0:23:69.22:0,69,946	0/0:7,0:7:21.06:0,21,277	0/0:20,0:20:60.20:0,60,836	1/1:1,28:29:87.28:1282,87,0	1/1:1,25:26:72.24:1070,72,0	1/1:0,8:8:15.05:224,15,0
chr10	44875724	.	GAGA	G	8176.95	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=15.961;DP=601;FS=1.485;HRun=0;HaplotypeScore=122.4154;InbreedingCoeff=0.9992;MQ=75.83;MQ0=0;MQRankSum=-10.583;QD=44.44;ReadPosRankSum=2.959;VQSLOD=6.6236;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,28:29:81.28:1347,81,0	0/0:19,0:19:54.19:0,54,1224	0/0:24,0:23:61.44:0,61,1219	0/0:42,0:38:84.04:0,84,1757	1/1:0,30:30:78.27:1298,78,0	0/0:17,0:17:51.18:0,51,1138	0/0:13,0:13:39.12:0,39,820	0/0:23,0:23:69.24:0,69,1541	0/0:22,0:22:63.22:0,63,1405	0/0:24,0:23:72.25:0,72,1595	0/0:22,0:22:63.22:0,63,1408	0/0:16,0:16:42.13:0,42,909	0/0:23,0:23:66.23:0,66,1485	0/0:17,0:17:48.16:0,48,1061	0/0:13,0:13:39.13:0,39,883	0/0:11,0:11:27.09:0,27,595	0/0:14,0:14:42.14:0,42,929	0/0:17,0:17:51.09:0,51,1032	1/1:1,9:10:27.09:438,27,0	1/1:1,28:29:69.24:1149,69,0	1/1:0,17:17:39.13:649,39,0	0/0:26,0:26:72.25:0,72,1606	0/0:36,0:36:99:0,108,2426	0/0:12,0:12:33.11:0,33,746	0/0:26,0:26:78.27:0,78,1745	1/1:2,29:31:87.30:1448,87,0	1/1:0,30:30:87.30:1448,87,0	1/1:0,8:8:24.08:400,24,0
chr10	44875801	.	C	CA	1326.21	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-9.326;DP=626;FS=4.167;HRun=4;HaplotypeScore=117.2296;InbreedingCoeff=0.9616;MQ=70.88;MQ0=0;MQRankSum=0.549;QD=34.90;ReadPosRankSum=-4.396;VQSLOD=1.1564;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:84.22:0,84,939	0/0:4,0:4:12.03:0,12,136	0/0:23,0:23:66.18:0,66,736	0/0:16,0:16:45.12:0,45,500	0/0:25,0:25:54.15:0,54,610	0/0:28,0:28:78.17:0,78,862	0/0:14,0:14:39.10:0,39,432	1/1:3,35:38:99:1421,105,0	0/0:27,0:27:81.23:0,81,918	0/0:21,0:21:63.18:0,63,712	0/0:19,0:19:54.14:0,54,600	0/0:19,0:19:57.16:0,57,646	0/0:23,0:23:69.20:0,69,783	0/0:26,0:26:69.19:0,69,783	0/0:26,0:26:72.20:0,72,815	0/0:21,0:21:60.17:0,60,677	0/0:23,0:23:60.15:0,60,669	0/0:13,0:13:39.11:0,39,441	0/0:23,0:23:63.12:0,63,685	0/0:30,0:30:84.24:0,84,948	0/0:16,0:16:36.10:0,36,408	0/0:24,0:24:72.18:0,72,799	0/0:24,0:24:69.20:0,69,783	0/0:9,0:9:27.07:0,27,298	0/0:29,0:29:72.20:0,72,817	0/0:42,0:42:99:0,117,1314	0/0:26,0:26:72.16:0,72,800	0/0:6,0:6:18.05:0,18,204
chr10	44875948	.	AAGAGAACCT	A	9609.59	PASS	AB=0.529;AC=11;AF=0.196;AN=56;BaseQRankSum=9.122;DP=735;FS=1.227;HRun=0;HaplotypeScore=228.7139;InbreedingCoeff=0.8013;MQ=76.22;MQ0=0;MQRankSum=-14.565;QD=75.07;ReadPosRankSum=3.287;VQSLOD=4.9984;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,144,6356	0/0:8,0:8:24.07:0,24,1040	0/0:33,0:33:89.88:0,90,3799	0/0:35,0:35:99:0,102,4112	0/0:21,0:21:63.22:0,63,2985	0/0:25,0:25:72.25:0,72,3387	0/0:19,0:19:54.19:0,54,2560	0/0:31,0:31:81.27:0,81,3566	0/0:35,0:35:99:0,99,4575	1/1:1,24:24:69.20:1920,69,0	1/1:2,14:16:36.12:1101,36,0	0/0:19,0:19:54.19:0,54,2487	0/0:23,0:23:69.24:0,69,3354	0/0:33,0:33:96.33:0,96,4428	1/1:0,33:33:90.31:2790,90,0	0/1:3,24:27:59.39:1797,0,59	0/0:19,0:18:51.18:0,51,2392	1/1:2,9:11:4.03:541,4,0	0/0:32,0:31:87.30:0,87,3870	0/0:21,0:21:60.21:0,60,2810	0/0:44,0:44:99:0,126,5485	0/0:26,0:26:78.27:0,78,3751	0/0:21,0:21:63.19:0,63,2765	0/0:30,0:30:90.31:0,90,4281	1/1:0,16:16:48.16:1460,48,0	0/0:31,1:32:0.09:0,0,3913	0/0:29,0:29:84.29:0,84,3928	0/0:21,0:21:60.21:0,60,2901
chr10	44876454	.	ACT	A	1098.66	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-0.746;DP=575;FS=2.624;HRun=0;HaplotypeScore=106.6948;InbreedingCoeff=0.9984;MQ=68.63;MQ0=0;MQRankSum=-1.875;QD=36.62;ReadPosRankSum=-2.937;VQSLOD=5.0209;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:72.22:0,72,1294	0/0:12,0:12:36.12:0,36,646	0/0:19,0:18:54.08:0,54,873	0/0:13,0:13:28.33:0,28,463	0/0:32,0:32:93.31:0,93,1702	0/0:15,0:15:45.14:0,45,793	0/0:13,0:13:39.12:0,39,695	1/1:2,28:30:84.26:1194,84,0	0/0:21,0:21:63.20:0,63,1134	0/0:30,0:30:90.30:0,90,1655	0/0:26,0:26:78.24:0,78,1383	0/0:18,0:18:54.19:0,54,1011	0/0:21,0:21:63.22:0,63,1164	0/0:18,0:18:54.19:0,54,996	0/0:12,0:12:36.12:0,36,667	0/0:11,0:11:33.11:0,33,618	0/0:13,0:13:36.12:0,36,620	0/0:15,0:15:42.14:0,42,776	0/0:13,0:12:39.12:0,39,673	0/0:35,0:35:99:0,102,1910	0/0:22,0:22:63.22:0,63,1121	0/0:18,0:18:54.17:0,54,979	0/0:23,0:23:66.21:0,66,1185	0/0:22,0:22:63.22:0,63,1180	0/0:28,0:28:81.26:0,81,1477	0/0:27,0:27:81.28:0,81,1505	0/0:29,0:29:84.27:0,84,1507	0/0:14,0:14:42.14:0,42,759
chr10	44877308	.	CTGATGATGATGA	C	58.82	PASS	AC=4;AF=0.40;AN=10;BaseQRankSum=0.715;DP=142;FS=0.000;HRun=0;HaplotypeScore=47.3803;MQ=32.98;MQ0=51;MQRankSum=-1.531;QD=8.40;ReadPosRankSum=-1.708;VQSLOD=0.9807;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	1/1:3,0:3:5.95:56,6,0	./.	./.	./.	./.	./.	./.	./.	1/1:4,0:3:3.01:80,3,0	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	0/0:4,0:1:3.01:0,3,78	0/0:11,0:11:3.01:0,3,142	0/0:8,0:7:18:0,18,580
chr10	44877847	.	TCTGCTGCTG	T	204.34	PASS	AB=1.000;AC=6;AF=0.143;AN=42;BaseQRankSum=3.863;DP=386;FS=6.395;HRun=0;HaplotypeScore=93.1299;InbreedingCoeff=0.1206;MQ=40.83;MQ0=55;MQRankSum=-1.091;QD=3.35;ReadPosRankSum=0.369;VQSLOD=1.0167;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:7:2.99:0,3,24	0/0:1,0:1:3.01:0,3,52	./.	0/0:30,0:2:4.26:0,4,54	./.	0/0:13,0:9:6.02:0,6,100	0/0:37,0:35:78.17:0,78,1334	1/1:7,7:6:14.94:190,15,0	0/0:17,0:16:34.21:0,34,364	0/0:13,0:6:5.03:0,5,132	0/0:3,0:3:2.97:0,3,20	0/0:17,0:17:30.10:0,30,553	0/0:19,0:18:24.08:0,24,429	0/0:19,0:19:39.13:0,39,607	0/1:14,0:14:20.45:20,0,292	0/1:16,0:15:49.10:49,0,99	0/0:42,0:41:96.23:0,96,2547	0/1:10,0:10:54.15:54,0,76	0/0:7,0:1:3:0,3,26	./.	0/0:12,0:7:3:0,3,25	0/1:7,0:5:0:0,0,0	./.	0/0:48,0:48:99:0,114,2168	0/0:5,0:3:3.01:0,3,39	./.	./.	./.
chr10	44877871	.	TCTG	T	771.02	PASS	AB=1.000;AC=17;AF=0.531;AN=32;BaseQRankSum=-2.469;DP=367;FS=1.443;HRun=0;HaplotypeScore=73.3244;InbreedingCoeff=0.0331;MQ=42.99;MQ0=46;MQRankSum=0.235;QD=3.12;ReadPosRankSum=5.244;VQSLOD=0.9443;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/1:28,0:4:1.83:2,0,27	0/1:30,0:4:1.15:1,0,7	./.	0/0:8,0:5:2.96:0,3,19	0/0:34,0:33:21.24:0,21,146	1/1:16,0:7:5.92:39,6,0	0/1:24,0:23:76.69:77,0,228	1/1:11,0:7:2.94:18,3,0	./.	0/1:19,0:19:45.75:46,0,233	0/1:16,0:16:99:106,0,117	0/1:20,0:19:66.58:67,0,137	1/1:11,2:13:3.65:46,4,0	1/1:5,8:11:8.99:74,9,0	0/0:39,0:38:32.54:0,33,355	1/1:8,0:8:10.74:75,11,0	0/0:8,0:3:4.55:0,5,28	./.	./.	./.	./.	0/1:49,0:49:99:342,0,416	./.	./.	./.	./.
chr10	44877892	.	G	GCTT	82.61	PASS	AB=0.871;AC=5;AF=0.119;AN=42;BaseQRankSum=4.550;DP=349;FS=1.514;HRun=0;HaplotypeScore=77.2046;InbreedingCoeff=-0.0431;MQ=43.10;MQ0=32;MQRankSum=-3.754;QD=1.84;ReadPosRankSum=-2.830;VQSLOD=1.0838;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:9:2.68:0,3,24	./.	0/0:14,0:4:12.04:0,12,179	0/0:11,0:2:6.02:0,6,75	0/0:6,0:5:2.84:0,3,25	0/0:7,0:4:9:0,9,85	0/0:26,0:25:24.97:0,25,312	0/0:11,0:5:14.94:0,15,130	0/0:26,0:24:43.33:0,43,586	0/0:10,0:8:11.59:0,12,87	./.	0/0:17,0:17:45.12:0,45,608	0/0:19,0:19:35.93:0,36,491	0/0:16,0:15:27.09:0,27,410	0/1:6,5:11:41.96:42,0,70	0/1:13,0:12:25.80:26,0,108	0/0:41,0:39:32.69:0,33,218	0/1:4,4:8:99:108,0,132	0/0:7,0:6:13.48:0,13,94	./.	./.	./.	./.	0/0:46,0:46:99:0,117,1643	0/1:6,0:6:0.01:0,0,0	0/1:7,0:7:2.60:3,0,81	0/0:4,0:2:3:0,3,25	./.
chr10	44877899	.	CTGATGATGATGA	C	969.05	PASS	AB=0.987;AC=10;AF=0.263;AN=38;BaseQRankSum=2.815;DP=352;FS=2.458;HRun=0;HaplotypeScore=103.3951;InbreedingCoeff=0.4065;MQ=42.18;MQ0=35;MQRankSum=-3.456;QD=11.14;ReadPosRankSum=-2.835;VQSLOD=1.4907;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:9:3.15:0,3,121	./.	./.	./.	0/0:8,0:7:2.45:0,2,123	0/0:7,0:4:6.02:0,6,246	0/0:27,0:24:7.43:0,7,254	0/0:10,0:6:3.01:0,3,80	0/0:25,0:22:30.10:0,30,1249	1/1:4,5:8:12.04:289,12,0	./.	0/0:15,0:15:33.11:0,33,1449	0/0:18,0:18:27.09:0,27,1067	0/0:15,0:14:18.06:0,18,810	1/1:11,0:11:3.01:66,3,0	1/1:14,0:13:5.50:143,6,0	0/1:36,0:35:45.56:398,0,46	1/1:8,0:8:6.02:140,6,0	0/0:8,0:6:9.03:0,9,302	./.	./.	./.	./.	0/0:47,0:46:60.21:0,60,3007	0/0:9,0:8:0.47:0,0,1	0/1:8,0:8:58.64:59,0,415	0/0:5,0:3:5.98:0,6,140	./.
chr10	44878593	.	T	TAC	1110.33	PASS	AB=0.905;AC=28;AF=0.583;AN=48;BaseQRankSum=-3.815;DP=373;FS=1.377;HRun=0;HaplotypeScore=70.8902;InbreedingCoeff=0.3612;MQ=60.08;MQ0=15;MQRankSum=1.993;QD=5.31;ReadPosRankSum=0.129;VQSLOD=2.6882;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:33:8.84:0,9,66	./.	./.	./.	0/1:14,0:13:0.01:0,0,0	1/1:13,0:13:1.81:39,2,0	1/1:21,0:22:14.88:123,15,0	1/1:22,0:19:2.97:20,3,0	0/1:6,2:8:23.44:51,0,23	1/1:9,0:9:5.85:55,6,0	0/1:9,1:10:3.02:31,0,3	1/1:12,0:12:11.98:100,12,0	1/1:8,0:6:7.75:94,8,0	0/1:7,2:8:18.73:84,0,19	1/1:11,1:11:5.97:63,6,0	0/0:10,0:8:2.03:0,2,6	0/0:10,0:11:13.24:0,13,71	1/1:9,1:8:8.99:109,9,0	0/0:11,0:8:2.84:0,3,14	0/1:5,0:5:0:0,0,0	./.	1/1:9,1:10:5.70:67,6,0	1/1:16,0:16:24.04:282,24,0	1/1:19,0:16:8.92:70,9,0	0/1:8,1:9:5.11:70,0,5	0/0:11,0:11:5.99:0,6,49	0/0:8,0:8:8.52:0,9,42	0/0:5,0:6:2.84:0,3,14
chr10	44878633	.	CACACAA	C	604.24	PASS	AB=0.865;AC=13;AF=0.260;AN=50;BaseQRankSum=1.174;DP=370;FS=1.712;HRun=0;HaplotypeScore=105.7772;InbreedingCoeff=0.6466;MQ=40.41;MQ0=25;MQRankSum=-5.326;QD=6.17;ReadPosRankSum=1.671;VQSLOD=1.7385;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:22,1:19:12.24:92,12,0	./.	./.	./.	0/0:12,0:10:2.84:0,3,14	0/0:16,0:13:30.98:0,31,266	0/0:21,0:18:42.97:0,43,568	0/0:28,0:24:69.10:0,69,755	0/0:11,0:10:22.73:0,23,325	0/0:11,0:9:21.02:0,21,294	0/0:6,0:6:10.59:0,11,224	0/0:10,0:8:14.08:0,14,298	0/0:15,0:10:20.42:0,20,314	0/0:15,0:12:25.50:0,25,500	0/0:14,0:12:23.35:0,23,326	0/0:10,0:9:21.45:0,21,221	0/1:19,0:17:7.34:7,0,145	0/0:15,0:12:21.04:0,21,393	1/1:13,1:13:26.51:226,27,0	1/1:1,3:4:2.89:20,3,0	0/1:6,13:19:0:0,0,0	0/0:6,0:6:11.07:0,11,217	0/0:13,0:12:27.08:0,27,565	0/0:24,0:20:32.12:0,32,416	0/0:6,0:6:15.05:0,15,373	0/1:8,0:8:32.10:113,0,32	1/1:2,6:8:10.59:221,11,0	1/1:3,0:3:8.89:82,9,0
chr10	44878635	.	CACAA	C	652.74	PASS	AB=0.969;AC=14;AF=0.280;AN=50;BaseQRankSum=0.773;DP=363;FS=2.627;HRun=0;HaplotypeScore=96.3786;InbreedingCoeff=0.6676;MQ=40.06;MQ0=25;MQRankSum=-3.838;QD=6.40;ReadPosRankSum=2.217;VQSLOD=2.1741;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:20,1:17:16.66:223,17,0	./.	./.	./.	1/1:2,8:9:2.66:19,3,0	0/0:16,0:13:28.15:0,28,177	0/0:21,0:18:42.97:0,43,468	0/0:31,0:27:78.06:0,78,772	0/0:11,0:10:18.81:0,19,241	0/0:10,0:8:21.02:0,21,243	0/0:6,0:6:10.57:0,11,134	0/0:10,0:8:14.26:0,14,197	0/0:15,0:10:20:0,20,230	0/0:15,0:12:25.49:0,25,326	0/0:14,0:12:17.29:0,17,188	0/0:10,0:9:21.45:0,21,196	0/1:18,0:17:74.89:75,0,78	0/0:14,0:11:21.03:0,21,296	1/1:13,0:12:26.61:199,27,0	0/1:3,0:3:0.08:0,0,0	0/1:19,0:19:0:0,0,0	0/0:5,0:5:11.07:0,11,140	0/0:13,0:12:27.07:0,27,363	0/0:24,0:20:32.12:0,32,347	0/0:6,0:6:15.05:0,15,237	0/1:6,1:7:5.81:121,0,6	1/1:8,0:8:10.58:123,11,0	1/1:3,0:3:8.68:49,9,0
chr10	44878647	.	A	AGAT	604.06	PASS	AB=1.000;AC=11;AF=0.229;AN=48;BaseQRankSum=2.115;DP=352;FS=0.000;HRun=0;HaplotypeScore=86.3693;InbreedingCoeff=0.3011;MQ=38.95;MQ0=24;MQRankSum=0.172;QD=6.36;ReadPosRankSum=0.300;VQSLOD=2.3706;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:14:6.32:0,6,51	0/0:1,0:1:3.01:0,3,50	./.	./.	0/1:9,0:8:0:0,0,0	0/0:21,0:16:20.58:0,21,278	0/0:20,0:18:24.20:0,24,392	0/0:36,0:29:84.28:0,84,1270	0/1:10,0:9:19.21:19,0,206	1/1:7,1:6:15.05:314,15,0	./.	0/0:12,0:10:11.78:0,12,152	0/1:15,0:10:15.40:15,0,60	0/0:18,0:15:17.94:0,18,252	1/1:11,0:6:0.59:38,1,0	0/0:12,0:9:9.80:0,10,24	0/0:23,0:22:16.92:0,17,363	1/1:11,1:10:9.03:204,9,0	0/0:10,0:10:21.03:0,21,291	0/0:3,0:3:0:0,0,0	0/0:12,0:12:0.47:0,0,1	0/0:5,0:5:9.02:0,9,117	0/0:12,0:11:9.03:0,9,138	0/1:25,0:22:99:114,0,101	./.	0/1:5,0:5:32.89:33,0,83	0/0:8,0:8:14.92:0,15,190	0/0:2,0:2:6.02:0,6,91
chr10	44878650	.	TA	T	298.96	PASS	AB=0.750;AC=9;AF=0.188;AN=48;BaseQRankSum=2.126;DP=343;FS=8.415;HRun=1;HaplotypeScore=75.3124;InbreedingCoeff=0.5610;MQ=39.31;MQ0=25;MQRankSum=0.834;QD=7.12;ReadPosRankSum=2.320;VQSLOD=0.4172;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:12:2.66:0,3,14	0/0:1,0:1:3.01:0,3,48	./.	./.	0/0:8,0:7:0:0,0,0	0/0:22,0:17:29.99:0,30,419	0/0:18,0:16:28.90:0,29,404	0/0:39,0:28:84.29:0,84,1278	0/0:10,0:9:21.07:0,21,292	1/1:4,4:6:2.69:43,3,0	./.	0/0:12,0:10:12.04:0,12,183	0/0:13,0:9:12.83:0,13,156	0/0:18,0:15:17.94:0,18,277	1/1:0,9:4:6.02:84,6,0	1/1:1,10:9:19.23:255,19,0	0/0:22,0:21:27.09:0,27,408	1/1:7,4:10:4.88:13,5,0	0/0:10,0:10:21.03:0,21,288	0/0:3,0:3:0:0,0,0	0/0:12,0:12:0.88:0,1,2	0/0:5,0:5:9.03:0,9,138	0/0:14,0:13:15.04:0,15,211	0/0:26,0:23:36:0,36,446	./.	0/1:2,1:3:32.89:33,0,83	0/0:8,0:8:14.78:0,15,187	0/0:2,0:2:6.02:0,6,91
chr10	44878653	.	A	ATAGA	960.29	PASS	AB=0.927;AC=22;AF=0.688;AN=32;BaseQRankSum=-2.246;DP=348;FS=0.000;HRun=0;HaplotypeScore=85.7289;InbreedingCoeff=0.3943;MQ=39.84;MQ0=29;MQRankSum=-0.132;QD=4.23;ReadPosRankSum=-1.642;VQSLOD=1.4683;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:15,0:12:0.01:0,0,0	0/0:1,0:1:3.01:0,3,43	./.	./.	./.	1/1:22,0:17:6.64:74,7,0	1/1:18,0:15:2.60:10,3,0	1/1:40,0:28:0.47:1,0,0	1/1:12,0:11:6.02:136,6,0	1/1:9,0:7:12:104,12,0	./.	./.	1/1:13,0:9:5.05:58,5,0	1/1:19,0:16:2.78:25,3,0	0/0:9,0:4:3:0,3,28	0/0:13,0:11:18.02:0,18,167	0/1:13,8:21:38.21:52,0,38	1/1:12,0:11:9:78,9,0	./.	./.	0/1:10,0:10:0:0,0,0	./.	./.	1/1:27,0:24:24.08:529,24,0	./.	./.	0/1:8,0:8:0:0,0,0	./.
chr10	44878699	.	AGAT	A	1086.05	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=5.940;DP=401;FS=4.030;HRun=0;HaplotypeScore=94.3055;InbreedingCoeff=0.8035;MQ=45.61;MQ0=16;MQRankSum=-4.817;QD=17.24;ReadPosRankSum=-1.810;VQSLOD=3.1550;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:17:11.91:161,12,0	0/0:4,0:4:12.04:0,12,194	0/0:10,0:6:15.04:0,15,197	0/0:6,0:4:12.01:0,12,138	1/1:8,0:7:8.91:132,9,0	0/0:27,0:23:25.17:0,25,682	0/0:14,0:11:17.85:0,18,223	0/0:35,0:25:74.09:0,74,842	0/0:17,0:16:45.13:0,45,641	0/0:17,4:18:9.26:0,9,275	0/0:18,0:18:9.97:0,10,29	0/0:20,0:19:39.12:0,39,594	0/0:16,0:13:6.55:0,7,317	0/0:10,0:8:14.89:0,15,236	0/0:18,0:14:11.89:0,12,45	0/0:14,4:16:4.92:0,5,250	0/0:21,0:21:30.09:0,30,462	0/0:18,0:18:12.74:0,13,91	1/1:6,0:6:18.06:275,18,0	1/1:1,0:1:3.01:46,3,0	1/1:10,0:10:2.77:46,3,0	0/0:12,0:12:30.57:0,31,446	0/0:21,0:18:33.11:0,33,487	0/0:24,0:23:37.35:0,37,582	0/0:8,0:8:5.89:0,6,18	1/1:8,0:8:18.86:317,19,0	1/1:7,0:7:14.97:200,15,0	1/1:3,0:3:6.02:92,6,0
chr10	44878701	.	A	AC	232.56	PASS	AB=1.000;AC=14;AF=0.250;AN=56;BaseQRankSum=6.174;DP=406;FS=0.759;HRun=0;HaplotypeScore=89.6741;InbreedingCoeff=0.6793;MQ=46.19;MQ0=13;MQRankSum=-7.495;QD=3.63;ReadPosRankSum=-0.851;VQSLOD=2.8157;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,13:17:11.82:142,12,0	0/0:4,0:4:12.04:0,12,168	0/0:13,0:7:15.05:0,15,209	0/0:6,0:4:9.02:0,9,113	1/1:1,7:7:9.03:124,9,0	0/0:27,0:23:45.98:0,46,630	0/0:13,0:10:18.04:0,18,234	0/0:34,0:26:78.72:0,79,1075	0/0:18,0:17:45.11:0,45,593	0/0:22,0:19:48.08:0,48,621	0/0:18,0:18:9.23:0,9,53	0/0:20,0:19:39.02:0,39,545	0/0:16,0:13:22.99:0,23,333	0/0:11,0:9:15.05:0,15,210	0/0:17,0:13:16.60:0,17,197	0/0:18,0:16:40.68:0,41,527	0/0:21,0:21:30.10:0,30,414	0/0:18,0:18:30.06:0,30,349	0/1:7,0:7:1.76:27,0,2	1/1:1,0:1:2.60:10,3,0	1/1:10,0:10:2.49:9,2,0	0/0:13,0:13:30.10:0,30,419	0/0:20,0:18:36.10:0,36,484	0/0:25,0:24:53.89:0,54,600	0/0:8,0:8:7.57:0,8,80	0/1:8,0:8:14.03:33,0,14	1/1:8,0:8:9.16:30,9,0	1/1:3,0:3:4.87:17,5,0
chr10	44878702	.	T	TA	1346.52	PASS	AB=0.922;AC=25;AF=0.446;AN=56;BaseQRankSum=9.754;DP=413;FS=5.998;HRun=1;HaplotypeScore=87.9046;InbreedingCoeff=0.3832;MQ=46.42;MQ0=12;MQRankSum=-4.231;QD=6.35;ReadPosRankSum=-0.425;VQSLOD=0.3309;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:18:11.95:145,12,0	0/0:4,0:4:12.04:0,12,168	0/0:15,0:8:18.05:0,18,238	0/0:6,0:4:12.01:0,12,138	1/1:8,0:8:9.03:128,9,0	0/0:20,8:24:0.05:0,0,557	0/0:12,1:10:15.05:0,15,209	0/0:33,0:27:77.90:0,78,967	0/0:18,0:17:39.83:0,40,566	0/1:20,3:20:29.33:29,0,211	0/1:18,0:18:1.45:1,0,7	0/0:17,2:19:38.98:0,39,545	0/1:10,5:13:8.70:9,0,309	0/0:8,3:9:15.01:0,15,207	0/1:17,0:13:27.08:27,0,31	0/1:18,0:16:21.69:22,0,219	0/0:21,0:21:29.69:0,30,388	0/1:14,4:18:13.53:70,0,14	1/1:3,7:10:23.57:357,24,0	1/1:0,1:1:3.01:44,3,0	1/1:0,10:10:3:44,3,0	0/0:13,0:13:33.10:0,33,444	0/0:19,1:18:36.12:0,36,500	0/1:25,0:24:21.67:22,0,389	1/1:8,0:8:2.76:16,3,0	1/1:2,7:9:26.78:339,27,0	1/1:1,8:9:14.96:192,15,0	1/1:0,3:3:6.02:88,6,0
chr10	44878709	.	T	TAGAC	2804.15	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=10.117;DP=423;FS=6.810;HRun=0;HaplotypeScore=101.6989;InbreedingCoeff=0.8703;MQ=50.40;MQ0=6;MQRankSum=-5.504;QD=15.67;ReadPosRankSum=-0.035;VQSLOD=2.3699;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:17:11.57:77,12,0	0/0:4,0:4:12.04:0,12,227	0/0:20,0:12:32.87:0,33,460	0/0:8,0:6:18.05:0,18,268	1/1:8,0:8:8.40:43,8,0	0/0:29,0:26:57.13:0,57,949	0/0:10,0:9:15.05:0,15,284	0/0:29,0:24:39.76:0,40,396	0/0:17,0:17:48.14:0,48,854	1/1:17,3:19:20.77:621,21,0	1/1:2,16:18:3.01:73,3,0	0/0:21,0:22:45.13:0,45,789	0/0:10,0:13:22.65:0,23,455	0/0:8,0:9:15.05:0,15,285	1/1:4,13:13:17.98:336,18,0	1/1:12,6:16:33.06:615,33,0	0/0:21,0:21:8.51:0,9,529	1/1:5,12:17:19.41:443,19,0	1/1:15,0:13:26.78:194,27,0	1/1:2,0:2:2.90:16,3,0	1/1:12,0:12:5.30:46,5,0	0/0:16,0:16:42.57:0,43,691	0/0:19,0:19:39.12:0,39,681	0/0:25,0:24:51.50:0,52,787	1/1:2,8:10:6.02:147,6,0	1/1:9,1:10:29.68:254,30,0	1/1:10,0:10:17.25:117,17,0	1/1:3,0:3:5.91:38,6,0
chr10	44882313	.	AT	A	5652.55	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=7.478;DP=765;FS=13.656;HRun=2;HaplotypeScore=127.1941;InbreedingCoeff=0.9991;MQ=70.07;MQ0=0;MQRankSum=1.586;QD=36.23;ReadPosRankSum=-0.902;VQSLOD=2.6944;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:61,0:61:99:0,168,1327	0/0:12,0:12:30.09:0,30,430	0/0:32,0:30:79.56:0,80,1242	0/0:37,0:36:93.27:0,93,1348	0/0:32,0:32:95.75:0,96,763	0/0:15,0:15:45.15:0,45,675	0/0:33,0:33:99:0,99,1484	1/1:0,31:31:93.27:1178,93,0	0/0:30,0:30:87.29:0,87,1304	1/1:2,29:31:87.28:1130,87,0	1/1:0,20:20:57.19:740,57,0	0/0:29,0:29:87.28:0,87,1283	0/0:23,0:23:69.22:0,69,1014	0/0:29,0:29:84.28:0,84,1259	1/1:1,12:12:36.12:468,36,0	1/1:0,13:13:39.13:506,39,0	0/0:19,0:19:57.19:0,57,853	1/1:1,27:28:33.49:929,33,0	0/0:27,0:27:77.46:0,77,566	0/0:28,0:28:77.80:0,78,628	0/0:47,0:47:99:0,138,1086	0/0:32,0:32:93.30:0,93,1374	0/0:23,0:23:66.22:0,66,988	0/0:33,0:33:96.33:0,96,1433	1/1:1,19:20:54.18:701,54,0	0/0:26,1:27:41.48:0,41,524	0/0:32,0:31:89.78:0,90,727	0/0:7,0:7:20.95:0,21,167
chr10	44883054	.	GTATTTTGTCCA	G	10090.61	PASS	AB=0.762;AC=12;AF=0.214;AN=56;BaseQRankSum=10.330;DP=634;FS=2.337;HRun=0;HaplotypeScore=228.1221;InbreedingCoeff=0.7770;MQ=59.57;MQ0=5;MQRankSum=-13.209;QD=65.95;ReadPosRankSum=1.296;VQSLOD=4.4885;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:60.18:0,60,3266	0/0:17,0:17:51.17:0,51,2810	0/0:25,0:13:36.02:0,36,1269	0/0:9,0:7:10.60:0,11,427	0/0:37,0:37:99:0,108,5899	0/0:30,0:30:87.28:0,87,4811	0/0:18,0:18:54.19:0,54,2748	0/0:27,0:27:81.25:0,81,4158	0/0:20,0:20:60.21:0,60,3479	1/1:0,23:23:66.18:2125,66,0	1/1:3,34:37:81.28:2699,81,0	0/0:21,0:21:63.22:0,63,3291	0/0:16,0:16:48.16:0,48,2720	0/0:23,0:23:69.24:0,69,3993	1/1:0,17:17:48.12:1528,48,0	0/1:4,15:19:99:1478,0,130	0/0:19,0:19:54.17:0,54,2945	1/1:0,6:6:15.05:509,15,0	0/0:20,0:18:45.15:0,45,2438	0/0:37,0:37:99:0,108,5983	0/0:15,0:15:45.15:0,45,2405	0/0:24,0:24:72.23:0,72,3646	0/0:27,0:27:78.27:0,78,4357	0/0:16,0:16:48.16:0,48,2740	1/1:2,21:23:51.18:1724,51,0	0/1:27,1:28:27.53:28,0,4145	0/0:41,0:41:99:0,117,6483	0/0:18,0:18:54.19:0,54,3147
chr10	44883893	.	TTGC	T	4699.59	PASS	AB=0.537;AC=14;AF=0.250;AN=56;BaseQRankSum=14.568;DP=515;FS=23.522;HRun=0;HaplotypeScore=92.1716;InbreedingCoeff=0.7909;MQ=69.26;MQ0=1;MQRankSum=-4.327;QD=38.52;ReadPosRankSum=2.633;VQSLOD=3.8144;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,18:19:42.14:716,42,0	0/0:10,0:10:24.08:0,24,554	0/0:23,0:17:45.49:0,45,901	0/0:19,0:18:42.11:0,42,886	1/1:0,17:17:33.11:563,33,0	0/0:25,0:25:75.26:0,75,1702	0/0:14,0:14:39.13:0,39,900	0/0:35,0:35:99:0,99,2193	0/0:17,0:17:51.18:0,51,1176	0/0:24,0:24:72.25:0,72,1638	0/0:27,0:27:75.26:0,75,1730	0/0:18,0:18:54.19:0,54,1224	0/0:16,0:16:45.15:0,45,1011	0/0:18,0:18:54.19:0,54,1228	0/0:17,0:17:48.16:0,48,1107	0/0:16,0:16:48.16:0,48,1107	0/0:10,0:10:30.10:0,30,692	0/0:12,0:12:36.12:0,36,818	0/1:1,17:18:15.01:805,0,15	1/1:1,15:16:33.11:563,33,0	1/1:2,25:27:57.15:938,57,0	0/0:32,0:32:96.33:0,96,2211	0/0:18,0:18:54.19:0,54,1242	0/0:19,0:19:57.20:0,57,1305	0/0:23,0:23:60.21:0,60,1384	0/1:3,11:14:27.07:604,0,27	1/1:0,9:9:24.08:409,24,0	1/1:0,2:2:6.02:102,6,0
chr10	44885043	.	TTC	T	5892.97	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=16.632;DP=537;FS=22.631;HRun=0;HaplotypeScore=90.0941;InbreedingCoeff=0.9884;MQ=84.63;MQ0=0;MQRankSum=-3.315;QD=36.38;ReadPosRankSum=3.718;VQSLOD=4.7004;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,15:15:39.05:512,39,0	0/0:9,0:9:27.09:0,27,478	0/0:26,0:26:72.13:0,72,1194	0/0:20,0:20:40.62:0,41,576	1/1:0,17:17:48.09:643,48,0	0/0:21,0:21:60.19:0,60,1059	0/0:11,0:11:33.11:0,33,598	0/0:24,0:24:60.18:0,60,1008	0/0:20,0:20:60.17:0,60,1028	0/0:34,0:34:93.30:0,93,1594	0/0:20,0:20:57.18:0,57,993	0/0:12,0:12:33.11:0,33,598	0/0:18,0:18:51.16:0,51,894	0/0:20,0:20:54.17:0,54,938	0/0:22,0:22:63.17:0,63,1054	0/0:12,0:12:36.10:0,36,584	0/0:16,0:16:45.15:0,45,790	0/0:19,0:19:54.10:0,54,913	1/1:1,6:7:18.05:232,18,0	1/1:0,24:24:66.18:922,66,0	1/1:0,27:27:72.20:1008,72,0	0/0:21,0:21:57.19:0,57,1032	0/0:20,0:20:54.13:0,54,877	0/0:9,0:9:24.08:0,24,435	0/0:21,0:21:63.17:0,63,1044	1/1:2,21:23:9.15:772,9,0	1/1:1,36:37:96.32:1374,96,0	1/1:0,11:11:30.10:430,30,0
chr10	44885770	.	TC	T	657.17	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.963;DP=605;FS=5.583;HRun=1;HaplotypeScore=79.7234;InbreedingCoeff=0.9950;MQ=64.06;MQ0=0;MQRankSum=-5.508;QD=31.29;ReadPosRankSum=-2.914;VQSLOD=2.3837;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:63.10:0,63,948	0/0:11,0:11:33.11:0,33,525	0/0:18,0:18:54.18:0,54,814	0/0:29,0:29:84.27:0,84,1296	0/0:23,0:23:66.22:0,66,1044	0/0:28,0:28:84.29:0,84,1341	0/0:8,0:8:24.08:0,24,383	1/1:0,21:21:63.18:752,63,0	0/0:27,0:27:81.28:0,81,1295	0/0:26,0:26:78.26:0,78,1227	0/0:21,0:21:63.18:0,63,955	0/0:20,0:20:60.19:0,60,935	0/0:24,0:24:72.21:0,72,1104	0/0:26,0:26:78.27:0,78,1245	0/0:16,0:16:48.16:0,48,767	0/0:24,0:23:69.24:0,69,1093	0/0:20,0:20:60.20:0,60,958	0/0:10,0:10:30.10:0,30,479	0/0:17,0:17:51.17:0,51,789	0/0:32,0:32:96.33:0,96,1532	0/0:18,0:18:54.18:0,54,863	0/0:32,0:32:96.33:0,96,1533	0/0:26,0:26:78.24:0,78,1199	0/0:8,0:8:24.07:0,24,361	0/0:19,0:19:57.18:0,57,888	0/0:29,0:29:87.29:0,87,1366	0/0:40,0:40:99:0,120,1906	0/0:11,0:11:33.11:0,33,526
chr10	44885773	.	TG	T	299.83	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.196;DP=597;FS=9.862;HRun=2;HaplotypeScore=80.9213;InbreedingCoeff=0.9930;MQ=63.87;MQ0=0;MQRankSum=-6.851;QD=15.78;ReadPosRankSum=-2.586;VQSLOD=2.0388;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:60.15:0,60,872	0/0:11,0:11:33.11:0,33,493	0/0:19,0:19:54.13:0,54,715	0/0:27,0:27:78.21:0,78,1133	0/0:24,0:24:66.22:0,66,986	0/0:29,0:29:84.26:0,84,1220	0/0:8,0:8:24.08:0,24,359	1/1:1,18:19:56.47:395,56,0	0/0:27,0:27:81.27:0,81,1213	0/0:25,0:25:72.24:0,72,1078	0/0:20,0:20:60.19:0,60,877	0/0:19,0:19:57.19:0,57,843	0/0:23,0:23:69.23:0,69,1032	0/0:26,0:26:75.25:0,75,1124	0/0:16,0:16:48.16:0,48,719	0/0:24,0:23:66.22:0,66,988	0/0:20,0:20:60.20:0,60,898	0/0:10,0:10:30.10:0,30,449	0/0:17,0:17:51.14:0,51,708	0/0:32,0:32:96.32:0,96,1432	0/0:18,0:18:54.18:0,54,809	0/0:31,0:31:93.31:0,93,1391	0/0:25,0:25:75.25:0,75,1119	0/0:7,0:7:21.05:0,21,293	0/0:19,0:19:54.18:0,54,809	0/0:28,0:28:81.27:0,81,1213	0/0:40,0:40:99:0,117,1751	0/0:11,0:11:33.11:0,33,494
chr10	44885776	.	TG	T	589.13	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.114;DP=593;FS=9.983;HRun=2;HaplotypeScore=78.9691;InbreedingCoeff=0.9891;MQ=63.16;MQ0=0;MQRankSum=-6.541;QD=31.01;ReadPosRankSum=-2.498;VQSLOD=1.6785;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:60.16:0,60,873	0/0:11,0:11:33.10:0,33,473	0/0:16,0:16:45.14:0,45,630	0/0:28,0:28:81.26:0,81,1180	0/0:22,0:22:63.21:0,63,942	0/0:29,0:29:84.27:0,84,1237	0/0:8,0:8:24.08:0,24,360	1/1:1,18:19:57.17:684,57,0	0/0:27,0:27:78.26:0,78,1169	0/0:27,0:27:81.27:0,81,1208	0/0:19,0:19:57.19:0,57,853	0/0:19,0:19:57.19:0,57,854	0/0:25,0:25:72.22:0,72,1052	0/0:26,0:26:75.25:0,75,1124	0/0:17,0:17:48.15:0,48,699	0/0:22,0:21:63.21:0,63,944	0/0:21,0:21:63.21:0,63,937	0/0:10,0:10:30.10:0,30,449	0/0:15,0:15:45.14:0,45,653	0/0:34,0:34:96.33:0,96,1437	0/0:18,0:18:54.18:0,54,809	0/0:33,0:33:99:0,99,1478	0/0:24,0:24:69.23:0,69,1031	0/0:6,0:6:18.06:0,18,268	0/0:19,0:19:57.19:0,57,853	0/0:26,0:26:78.26:0,78,1169	0/0:40,0:40:99:0,117,1745	0/0:11,0:11:33.11:0,33,494
chr10	44886014	.	AG	A	211.18	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=0.949;DP=503;FS=25.082;HRun=2;HaplotypeScore=109.3682;InbreedingCoeff=0.8723;MQ=76.79;MQ0=0;MQRankSum=0.070;QD=10.06;ReadPosRankSum=0.536;VQSLOD=0.2554;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:47.82:0,48,405	0/0:9,0:9:20.64:0,21,180	0/0:22,0:19:50.07:0,50,489	0/0:25,0:21:47.89:0,48,578	0/0:31,0:31:77.19:0,77,679	0/0:25,0:25:72.15:0,72,1005	0/0:26,0:26:78.20:0,78,1065	0/0:18,0:18:33.01:0,33,328	0/0:13,0:13:39.11:0,39,560	0/0:15,0:15:41.84:0,42,428	0/0:13,0:13:29.77:0,30,290	0/0:19,0:19:57.15:0,57,784	0/0:22,0:22:46.28:0,46,788	0/0:7,0:7:21.05:0,21,290	0/0:7,0:7:8.99:0,9,101	0/0:8,0:8:18:0,18,165	1/1:11,10:21:36.82:306,37,0	0/0:6,0:6:17.97:0,18,187	0/0:8,0:8:23.88:0,24,229	0/0:25,0:25:53.30:0,53,570	0/0:19,0:19:29.88:0,30,251	0/0:31,0:31:90.27:0,90,1280	0/0:18,0:18:51.15:0,51,719	0/0:26,0:26:78.22:0,78,1103	0/0:12,0:12:35.91:0,36,314	0/0:29,0:29:83.75:0,84,716	0/0:21,0:21:53.95:0,54,481	0/0:3,0:3:8.99:0,9,76
chr10	44886016	.	G	GT	4538.02	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=13.579;DP=521;FS=7.648;HRun=7;HaplotypeScore=112.3496;InbreedingCoeff=0.9572;MQ=74.82;MQ0=1;MQRankSum=-4.022;QD=17.12;ReadPosRankSum=-2.988;VQSLOD=3.3876;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:2,22:25:50.88:518,51,0	1/1:2,8:10:20.98:215,21,0	0/0:23,0:20:17.59:0,18,188	0/0:24,0:20:30.86:0,31,197	1/1:8,21:32:61.28:601,61,0	0/0:24,0:24:60.06:0,60,569	0/0:25,0:25:71.99:0,72,653	1/1:16,1:17:26.16:199,26,0	0/0:13,0:13:36.01:0,36,330	1/1:12,0:15:22.60:135,23,0	1/1:5,0:12:18.60:114,19,0	0/0:19,0:19:41.94:0,42,384	0/0:21,0:22:55.84:0,56,503	0/0:9,0:9:15:0,15,141	1/1:6,0:7:5.77:31,6,0	1/1:8,0:10:20.39:119,20,0	0/0:21,0:21:53.06:0,53,247	1/1:6,0:6:5.80:32,6,0	1/1:4,5:8:15.90:164,16,0	1/1:6,20:28:58.73:596,59,0	1/1:4,14:21:33.33:335,33,0	0/0:31,0:31:74.96:0,75,682	0/0:18,0:18:45:0,45,410	0/0:27,0:27:69.08:0,69,655	1/1:15,1:17:37.87:222,38,0	1/1:8,19:29:63.36:628,63,0	1/1:3,16:21:45.05:491,45,0	1/1:1,4:5:12.03:137,12,0
chr10	44886023	.	T	TTG	2203.41	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=13.287;DP=503;FS=7.028;HRun=0;HaplotypeScore=116.8857;InbreedingCoeff=0.7995;MQ=69.02;MQ0=1;MQRankSum=-2.247;QD=8.74;ReadPosRankSum=-1.470;VQSLOD=2.7023;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:27:4.55:120,0,5	1/1:10,0:10:18.88:92,19,0	0/0:22,0:19:25.75:0,26,294	0/0:21,0:17:12.35:0,12,251	1/1:29,0:29:9.70:225,10,0	0/0:23,0:23:65.63:0,66,853	0/0:27,0:27:81.11:0,81,1030	1/1:2,11:15:32.92:282,33,0	0/0:15,0:15:42.91:0,43,510	1/1:3,0:16:33.83:228,34,0	1/1:9,0:9:21.18:138,21,0	0/0:18,0:18:44.67:0,45,577	0/0:23,0:23:62.85:0,63,817	0/0:8,0:8:20.81:0,21,236	1/1:2,0:12:8.90:70,9,0	1/1:5,2:11:20.79:158,21,0	0/0:20,0:20:57.36:0,57,320	1/1:3,0:3:8.85:61,9,0	1/1:7,0:6:11.50:62,12,0	1/1:26,0:26:14.64:188,15,0	0/1:21,0:21:27.55:75,0,28	0/0:30,0:31:81.08:0,81,1001	0/0:17,0:17:45.08:0,45,597	0/0:26,0:26:75.10:0,75,1010	1/1:13,0:14:35.93:221,36,0	1/1:25,0:26:43.46:286,43,0	1/1:20,0:20:26.04:178,26,0	0/1:5,0:5:0.67:37,0,1
chr10	44886033	.	GC	G	1259.09	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=13.003;DP=455;FS=9.068;HRun=1;HaplotypeScore=91.4853;InbreedingCoeff=0.7596;MQ=65.67;MQ0=1;MQRankSum=-2.607;QD=7.19;ReadPosRankSum=4.276;VQSLOD=0.4562;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:21:16.54:177,17,0	0/0:6,0:6:14.15:0,14,78	0/0:18,1:16:23.68:0,24,348	0/0:24,3:23:44.61:0,45,367	1/1:23,2:25:39.47:203,39,0	0/0:24,0:24:68.11:0,68,814	0/0:31,0:31:90.11:0,90,1074	0/0:17,0:17:0.19:0,0,23	0/0:12,0:12:34.34:0,34,428	0/1:10,0:10:5.74:7,0,6	1/1:7,0:7:1.69:5,2,0	0/0:16,0:16:40.80:0,41,553	0/0:25,0:25:65.80:0,66,794	0/0:9,0:9:25.23:0,25,274	0/0:12,0:12:0.71:0,1,2	0/0:7,0:7:0.88:0,1,3	1/1:12,0:12:32.98:278,33,0	1/1:3,0:2:3.06:8,3,0	1/1:8,0:7:6:41,6,0	1/1:24,1:25:25.96:142,26,0	1/1:16,2:18:36.45:202,36,0	0/0:24,0:24:58.32:0,58,828	0/0:14,0:14:39.07:0,39,489	0/0:27,0:27:78.12:0,78,955	0/0:10,0:10:1.82:0,2,11	1/1:22,2:24:34.79:199,35,0	1/1:17,0:17:36.31:160,36,0	1/1:5,0:5:7.13:33,7,0
chr10	44886169	.	CAGAGAGAGAGAAAGAGGAAG	C	3206.09	PASS	AB=1.000;AC=15;AF=0.288;AN=52;BaseQRankSum=1.258;DP=539;FS=3.327;HRun=0;HaplotypeScore=232.8603;InbreedingCoeff=0.5723;MQ=63.47;MQ0=6;MQRankSum=0.071;QD=23.40;ReadPosRankSum=2.342;VQSLOD=2.5474;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/1:13,0:13:69.13:69,0,123	0/0:39,0:22:12.56:0,13,531	0/0:62,0:32:35.77:0,36,782	1/1:18,0:18:41.87:903,42,0	0/0:25,0:26:68.41:0,68,3051	0/0:18,0:18:27.54:0,28,887	1/1:19,0:18:24.06:413,24,0	0/0:13,0:13:33.11:0,33,1639	0/1:17,0:17:92.83:93,0,217	0/0:19,0:19:23.74:0,24,185	0/0:26,0:26:66.68:0,67,3050	0/0:23,0:23:48.15:0,48,1840	0/0:9,0:9:21.06:0,21,895	0/0:15,0:15:3:0,3,27	0/0:16,0:16:8.96:0,9,131	0/1:13,0:13:91.62:92,0,546	0/0:9,0:9:5.93:0,6,41	1/1:9,0:9:18.06:398,18,0	./.	0/0:14,0:14:2.87:0,3,15	0/0:18,0:17:36.59:0,37,1443	0/0:27,0:27:66.23:0,66,2819	0/0:26,0:25:47.69:0,48,1915	0/0:13,0:13:14.81:0,15,108	1/1:21,0:22:5.88:733,6,0	1/1:3,17:20:4.91:323,5,0	1/1:1,0:6:9.03:356,9,0
chr10	44886179	.	GAAAGAGGA	G	3655.96	PASS	AB=1.000;AC=26;AF=0.500;AN=52;BaseQRankSum=4.299;DP=490;FS=2.184;HRun=0;HaplotypeScore=126.4589;InbreedingCoeff=0.4190;MQ=60.79;MQ0=8;MQRankSum=-1.689;QD=17.00;ReadPosRankSum=0.092;VQSLOD=2.3227;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	1/1:14,0:15:9.41:116,9,0	0/0:29,0:12:1.85:0,2,490	0/0:59,0:29:28.21:0,28,759	1/1:18,0:18:41.80:903,42,0	0/0:24,0:24:71.42:0,71,1893	0/0:15,0:15:28.58:0,29,515	1/1:7,8:13:24.06:413,24,0	0/1:13,0:13:30.37:30,0,826	0/1:14,0:14:18.92:249,0,19	0/1:15,0:15:56.15:56,0,95	0/0:24,0:24:63.17:0,63,1697	0/0:18,0:18:42.10:0,42,885	0/0:9,0:9:21.06:0,21,466	1/1:15,0:15:3.01:37,3,0	1/1:16,0:16:9.03:138,9,0	0/1:13,0:13:11.56:12,0,482	0/1:11,0:11:14.02:56,0,14	1/1:0,6:6:18.06:398,18,0	./.	1/1:11,0:11:3.01:54,3,0	0/0:18,0:17:36.56:0,37,883	0/0:29,0:29:71.73:0,72,1750	0/0:24,0:23:49.07:0,49,1152	0/1:13,0:13:39.94:129,0,40	1/1:16,0:16:47.96:760,48,0	1/1:18,0:17:4.91:120,5,0	1/1:6,0:5:9.03:185,9,0
chr10	44886181	.	AAGAGGAAGAGAG	A	3588.70	PASS	AB=0.979;AC=29;AF=0.558;AN=52;BaseQRankSum=6.715;DP=479;FS=3.238;HRun=0;HaplotypeScore=148.2156;InbreedingCoeff=0.6749;MQ=60.85;MQ0=8;MQRankSum=-0.917;QD=16.85;ReadPosRankSum=0.137;VQSLOD=2.8317;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/1:15,0:15:22.56:23,0,67	0/0:28,0:12:13.39:0,13,352	0/0:58,0:28:39.69:0,40,587	1/1:18,0:18:39.13:561,39,0	0/0:22,0:22:60.14:0,60,1908	0/1:14,0:15:2.36:2,0,391	1/1:14,0:12:15.05:217,15,0	0/0:13,0:13:39.06:0,39,937	1/1:2,0:14:27.91:374,28,0	1/1:3,13:16:11.94:214,12,0	0/0:24,0:24:63.69:0,64,1682	0/0:16,0:16:41.63:0,42,914	0/0:9,0:9:18.06:0,18,414	1/1:0,14:14:3.01:102,3,0	1/1:0,1:16:9.03:217,9,0	0/1:13,0:13:54.70:55,0,308	1/1:2,9:11:6:134,6,0	1/1:6,0:6:18.06:256,18,0	./.	1/1:12,0:12:3.01:36,3,0	0/0:18,0:17:36.59:0,37,851	0/0:30,0:30:78.17:0,78,1720	0/0:23,0:22:49.78:0,50,1105	1/1:2,10:12:9.03:334,9,0	1/1:14,0:14:39.13:658,39,0	1/1:17,0:16:5.42:161,5,0	1/1:6,0:5:9.03:246,9,0
chr10	44886184	.	AGG	A	1059.72	PASS	AB=1.000;AC=27;AF=0.519;AN=52;BaseQRankSum=9.173;DP=470;FS=2.402;HRun=2;HaplotypeScore=100.0606;InbreedingCoeff=0.7141;MQ=59.41;MQ0=8;MQRankSum=-1.054;QD=5.76;ReadPosRankSum=0.484;VQSLOD=-0.0155;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	1/1:1,11:14:13.63:131,14,0	0/0:27,0:11:22.11:0,22,372	0/0:55,0:26:53.10:0,53,902	1/1:20,0:20:38.25:251,38,0	0/0:20,0:20:60.07:0,60,1065	0/0:14,0:15:4.66:0,5,394	1/1:10,1:9:14.85:102,15,0	0/0:13,0:13:17.08:0,17,561	1/1:12,0:12:29.75:210,30,0	1/1:16,0:16:2.50:13,2,0	0/0:22,0:22:40.76:0,41,1056	0/0:15,0:16:0.03:0,0,540	0/0:8,0:8:18.05:0,18,316	1/1:14,0:14:1.82:5,2,0	1/1:16,0:16:8.52:41,9,0	0/0:12,0:13:5.26:0,5,388	1/1:11,0:11:4.61:19,5,0	1/1:6,0:6:17.70:116,18,0	./.	1/1:15,0:15:2.94:18,3,0	0/0:17,0:17:32.71:0,33,612	0/0:30,0:31:51.74:0,52,1210	0/0:22,0:22:32.02:0,32,748	1/1:10,0:10:8.52:41,9,0	1/1:14,0:14:38.33:247,38,0	0/1:19,0:18:14.53:15,0,34	1/1:6,0:5:8.52:42,9,0
chr10	44886185	.	GGA	G	2371.51	PASS	AB=0.990;AC=31;AF=0.596;AN=52;BaseQRankSum=7.815;DP=465;FS=14.228;HRun=0;HaplotypeScore=93.6504;InbreedingCoeff=0.4495;MQ=58.44;MQ0=8;MQRankSum=-1.723;QD=9.72;ReadPosRankSum=0.547;VQSLOD=2.4311;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	1/1:14,0:14:12:98,12,0	0/0:27,0:11:14.56:0,15,329	0/0:52,0:23:38.14:0,38,591	1/1:17,2:19:39.11:562,39,0	0/0:21,0:21:59.59:0,60,877	0/1:15,0:15:21.21:21,0,284	1/1:11,0:9:15.05:217,15,0	0/1:13,0:13:22.15:22,0,382	1/1:12,0:12:30.99:443,31,0	1/1:15,1:16:5.91:39,6,0	0/0:22,0:22:8.58:0,9,752	0/1:16,0:16:48.27:48,0,381	0/0:8,0:8:17.95:0,18,242	1/1:14,0:14:2.92:17,3,0	1/1:16,0:16:8.97:70,9,0	0/0:13,0:13:14.80:0,15,333	1/1:9,1:10:5.94:42,6,0	1/1:6,0:6:18.06:256,18,0	./.	1/1:0,14:14:3.01:36,3,0	0/1:18,1:18:27.58:28,0,418	0/0:30,1:31:48.06:0,48,964	0/0:22,0:21:2.28:0,2,518	1/1:10,0:10:8.97:69,9,0	1/1:11,3:14:38.91:530,39,0	0/1:19,0:18:10.12:17,0,10	1/1:6,0:5:8.52:43,9,0
chr10	44886187	.	AAG	A	989.66	PASS	AB=0.980;AC=32;AF=0.762;AN=42;BaseQRankSum=1.308;DP=479;FS=0.000;HRun=0;HaplotypeScore=103.3506;InbreedingCoeff=-0.0696;MQ=57.72;MQ0=10;MQRankSum=-0.586;QD=3.12;ReadPosRankSum=3.159;VQSLOD=2.1112;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/1:14,0:14:16.65:43,0,17	./.	./.	./.	0/1:23,0:23:22.02:22,0,228	1/1:14,0:15:2.03:13,2,0	./.	1/1:10,2:13:11.86:111,12,0	0/1:13,0:13:0.35:0,0,0	0/1:17,0:16:8.09:8,0,11	1/1:17,5:22:17.90:185,18,0	1/1:13,2:15:9.02:96,9,0	1/1:5,3:8:6.01:58,6,0	1/1:14,0:14:1.55:4,2,0	0/1:17,0:17:20.16:30,0,20	0/1:13,0:13:8.03:8,0,17	1/1:10,0:10:5.80:33,6,0	./.	./.	0/0:17,0:17:3.01:0,3,41	1/1:14,4:17:2.84:59,3,0	0/1:26,5:32:41.77:93,0,42	1/1:14,8:21:15.03:160,15,0	1/1:11,0:11:8.52:42,9,0	0/1:13,0:14:17.26:17,0,26	1/1:17,2:18:11.42:90,11,0	1/1:7,0:6:8.44:40,8,0
chr10	44886317	.	A	AT	4994.83	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=3.273;DP=619;FS=1.557;HRun=8;HaplotypeScore=105.7739;InbreedingCoeff=0.9688;MQ=70.56;MQ0=0;MQRankSum=0.141;QD=25.88;ReadPosRankSum=0.941;VQSLOD=4.6516;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,26:28:5.25:568,5,0	0/0:15,0:15:39.02:0,39,357	0/0:24,0:23:30.17:0,30,369	0/0:12,0:12:17.63:0,18,164	1/1:6,25:32:47.55:768,48,0	0/0:26,0:26:69.02:0,69,631	0/0:18,0:18:51.03:0,51,466	0/0:3,0:30:48.17:0,48,145	0/0:15,0:15:42.02:0,42,384	0/0:3,0:22:38.70:0,39,114	0/0:3,0:28:40.73:0,41,120	0/0:23,0:23:63.02:0,63,576	0/0:22,0:22:57.02:0,57,522	0/0:26,0:26:75.03:0,75,686	0/0:1,0:21:36.67:0,37,108	0/0:2,0:19:32.59:0,33,96	0/0:21,0:21:57.02:0,57,522	0/0:3,0:13:18.33:0,18,54	1/1:2,15:18:44.97:499,45,0	1/1:4,26:30:75.22:866,75,0	1/1:5,14:19:42.12:483,42,0	0/0:22,0:22:66.04:0,66,603	0/0:28,0:28:78.02:0,78,709	0/0:13,0:13:10.19:0,10,227	0/0:2,0:28:48.89:0,49,144	1/1:5,19:26:49.25:634,49,0	1/1:2,26:28:78.23:900,78,0	1/1:2,10:12:24.07:277,24,0
chr10	44887635	.	A	AG	11995.96	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=14.486;DP=558;FS=2.853;HRun=3;HaplotypeScore=128.2987;InbreedingCoeff=0.9635;MQ=81.01;MQ0=0;MQRankSum=-9.659;QD=35.70;ReadPosRankSum=1.480;VQSLOD=4.0472;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,32:34:90.21:1215,90,0	1/1:0,6:6:18.06:252,18,0	0/0:24,0:24:58.97:0,59,663	0/0:14,0:14:40.66:0,41,453	1/1:6,22:28:63.21:875,63,0	0/0:23,0:23:63.19:0,63,756	0/0:22,0:22:66.20:0,66,792	1/1:4,31:35:93.28:1262,93,0	0/0:17,0:17:48.15:0,48,576	1/1:2,18:20:57.15:762,57,0	1/1:4,18:22:51.17:714,51,0	0/0:19,0:19:54.16:0,54,647	0/0:15,0:15:42.13:0,42,504	0/0:17,0:17:48.15:0,48,575	1/1:0,20:20:57.19:792,57,0	1/1:2,6:8:21.07:291,21,0	0/0:23,0:23:65.94:0,66,767	1/1:3,11:14:0.66:423,1,0	1/1:2,15:17:42.14:588,42,0	1/1:2,29:32:90.30:1256,90,0	1/1:0,21:21:60.20:839,60,0	0/0:22,0:22:63.18:0,63,744	0/0:11,0:11:33.10:0,33,395	0/0:15,0:15:42.13:0,42,504	1/1:0,11:10:30.10:420,30,0	1/1:4,30:34:87.29:1217,87,0	1/1:6,21:26:60.20:839,60,0	1/1:1,6:7:18.06:252,18,0
chr10	44887684	.	C	CTGTTT	15426.89	PASS	AB=1.000;AC=31;AF=0.554;AN=56;BaseQRankSum=13.104;DP=579;FS=2.765;HRun=0;HaplotypeScore=149.2507;InbreedingCoeff=0.9257;MQ=71.42;MQ0=0;MQRankSum=-12.424;QD=45.11;ReadPosRankSum=-2.823;VQSLOD=4.3809;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:24:59.92:844,60,0	1/1:2,7:10:27.09:758,27,0	0/0:17,0:16:33.06:0,33,533	0/0:17,0:17:47.18:0,47,638	1/1:31,0:29:81.12:1213,81,0	0/0:30,0:30:87.29:0,87,1704	0/0:17,0:17:48.11:0,48,778	1/1:44,0:43:87.16:1589,87,0	0/0:17,0:17:48.16:0,48,935	1/1:31,0:30:83.82:1971,84,0	1/1:26,0:25:75.05:1676,75,0	0/0:27,0:27:75.26:0,75,1533	0/0:13,0:13:33.10:0,33,623	0/0:21,0:21:60.19:0,60,1162	1/1:18,0:18:48.07:971,48,0	1/1:9,0:9:21.06:483,21,0	0/0:18,0:18:54.09:0,54,917	0/1:16,0:16:28.44:686,0,28	1/1:17,0:17:48.11:706,48,0	1/1:29,0:28:69.14:1092,69,0	1/1:13,0:13:26.90:343,27,0	0/0:22,0:22:66.21:0,66,1241	0/0:26,0:26:72.22:0,72,1316	0/0:12,0:12:33.11:0,33,662	1/1:15,0:14:33.09:893,33,0	1/1:24,0:24:56.98:785,57,0	1/1:28,0:28:72.19:1123,72,0	1/1:7,0:7:18.06:293,18,0
chr10	44887687	.	T	TTTTG	16301.67	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=9.189;DP=569;FS=0.658;HRun=0;HaplotypeScore=129.4958;InbreedingCoeff=0.7927;MQ=71.53;MQ0=0;MQRankSum=-14.004;QD=48.66;ReadPosRankSum=-1.559;VQSLOD=5.3288;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,20:25:59.92:1260,60,0	0/1:12,0:12:23.28:469,0,23	0/0:16,0:15:32.68:0,33,498	0/0:18,0:18:36.27:0,36,595	1/1:4,27:29:84.11:1785,84,0	0/0:29,0:29:87.29:0,87,1598	0/0:18,0:18:51.04:0,51,749	1/1:37,4:40:75.78:1480,76,0	0/0:17,0:17:51.13:0,51,892	1/1:31,0:30:80.03:1426,80,0	1/1:26,0:25:74.72:1199,75,0	0/0:26,0:26:75.26:0,75,1423	0/0:11,0:11:33.10:0,33,573	0/0:22,0:22:60.19:0,60,1085	1/1:17,0:17:48.07:753,48,0	0/1:9,0:9:8.33:318,0,8	0/0:18,0:18:54.05:0,54,852	0/1:14,0:14:26.79:546,0,27	1/1:2,16:18:48.11:1019,48,0	1/1:3,23:27:78.15:1702,78,0	1/1:5,7:12:29.90:499,30,0	0/0:22,0:22:66.21:0,66,1175	0/0:26,0:26:78.23:0,78,1290	0/0:11,0:11:33.11:0,33,616	1/1:14,0:13:18.17:631,18,0	1/1:8,15:23:56.98:1097,57,0	1/1:3,24:27:72.19:1669,72,0	1/1:1,6:7:18.06:449,18,0
chr10	44887688	.	T	TTTG	11021.79	PASS	AB=0.967;AC=29;AF=0.518;AN=56;BaseQRankSum=15.246;DP=576;FS=1.402;HRun=0;HaplotypeScore=138.9115;InbreedingCoeff=0.7766;MQ=72.88;MQ0=0;MQRankSum=-14.016;QD=32.61;ReadPosRankSum=-0.545;VQSLOD=4.7894;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:25:59.88:710,60,0	0/1:12,0:12:53.88:336,0,54	0/0:17,0:16:33.09:0,33,483	0/0:19,0:19:50.41:0,50,576	1/1:31,0:29:76.78:1007,77,0	0/0:31,0:31:87.29:0,87,1438	0/0:18,0:18:53.80:0,54,717	1/1:42,0:41:40.92:1062,41,0	0/0:17,0:17:51.16:0,51,815	1/1:29,2:30:72.91:1268,73,0	1/1:24,2:25:72.14:1019,72,0	0/0:27,0:27:75.26:0,75,1278	0/0:11,0:11:33.10:0,33,517	0/0:21,0:21:63.18:0,63,1001	1/1:14,4:18:48.02:670,48,0	0/1:8,1:9:27.25:267,0,27	0/0:18,0:18:53.93:0,54,771	0/1:13,0:13:26.95:463,0,27	1/1:18,0:18:48.10:603,48,0	1/1:29,0:28:69.45:927,69,0	1/1:12,0:12:22.55:293,23,0	0/0:22,0:22:66.21:0,66,1068	0/0:26,0:26:78.21:0,78,1180	0/0:11,0:11:33.11:0,33,557	1/1:13,0:12:9.26:530,9,0	1/1:23,0:23:56.98:682,57,0	1/1:29,0:29:72.16:943,72,0	1/1:7,0:7:18.05:241,18,0
chr10	44887690	.	T	TG	3885.94	PASS	AB=0.710;AC=24;AF=0.429;AN=56;BaseQRankSum=17.204;DP=568;FS=6.582;HRun=0;HaplotypeScore=135.5290;InbreedingCoeff=0.4508;MQ=70.86;MQ0=0;MQRankSum=-14.218;QD=11.67;ReadPosRankSum=1.177;VQSLOD=4.0278;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:24:43.52:230,44,0	0/1:10,2:12:61.81:85,0,62	0/0:15,0:14:36.08:0,36,438	0/0:18,0:18:43.53:0,44,482	1/1:32,0:30:53.28:359,53,0	0/0:31,0:31:93.23:0,93,1227	0/0:18,0:18:43.19:0,43,581	0/1:26,16:41:8.82:409,0,9	0/0:18,0:18:51.15:0,51,679	0/1:13,16:29:99:394,0,166	0/1:9,18:26:24.18:410,0,24	0/0:26,0:26:78.25:0,78,1074	0/0:11,0:11:33.06:0,33,423	0/0:21,0:21:63.15:0,63,826	1/1:9,8:17:25.90:298,26,0	0/1:4,5:9:72.34:95,0,72	0/0:18,0:18:47.90:0,48,632	0/1:6,6:12:29.17:177,0,29	1/1:17,0:17:41.10:203,41,0	0/1:29,0:28:7.58:241,0,8	1/1:12,1:13:19.54:146,20,0	0/0:22,0:22:66.21:0,66,891	0/0:26,0:26:78.13:0,78,981	0/0:11,0:11:33.11:0,33,460	0/1:2,11:12:5.61:198,0,6	1/1:21,2:23:53.06:314,53,0	1/1:28,0:28:19.58:260,20,0	1/1:6,0:6:16.07:67,16,0
chr10	44887695	.	T	TTTTA	9781.38	PASS	AB=0.947;AC=23;AF=0.411;AN=56;BaseQRankSum=15.044;DP=585;FS=1.013;HRun=0;HaplotypeScore=147.3706;InbreedingCoeff=0.3824;MQ=72.05;MQ0=0;MQRankSum=-15.267;QD=28.27;ReadPosRankSum=0.815;VQSLOD=4.7917;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:25:3.40:518,0,3	0/1:11,1:13:77.09:264,0,77	0/0:16,0:15:28.88:0,29,386	0/0:19,0:19:18.30:0,18,477	0/1:33,0:31:16.54:634,0,17	0/0:30,0:30:90.29:0,90,1480	0/0:17,0:17:44.68:0,45,623	1/1:12,0:43:99:1365,102,0	0/0:20,0:20:54.08:0,54,795	1/1:13,16:29:49.74:1156,50,0	1/1:8,18:25:60.14:1170,60,0	0/0:26,0:26:78.26:0,78,1319	0/0:11,0:11:33.10:0,33,524	0/0:21,0:21:63.19:0,63,1012	1/1:8,8:16:48.06:881,48,0	1/1:4,5:9:24.53:431,25,0	0/0:18,0:18:47.89:0,48,704	0/1:8,6:14:9.89:549,0,10	1/1:16,0:16:15.34:327,15,0	0/1:32,0:31:71.02:577,0,71	0/1:12,0:12:9.35:127,0,9	0/0:23,0:23:63.10:0,63,971	0/0:26,0:26:72.15:0,72,1139	0/0:12,0:12:36.06:0,36,534	1/1:2,11:12:33.10:656,33,0	0/1:22,1:23:10.40:405,0,10	0/1:31,0:31:61.93:572,0,62	0/1:10,0:10:68.63:149,0,69
chr10	44888756	.	GCAT	G	8590.30	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=9.388;DP=722;FS=2.705;HRun=0;HaplotypeScore=126.2335;InbreedingCoeff=0.9831;MQ=68.39;MQ0=0;MQRankSum=0.499;QD=41.30;ReadPosRankSum=1.751;VQSLOD=5.8539;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,40:42:99:1835,111,0	0/0:11,0:11:30.08:0,30,628	0/0:28,0:27:81.24:0,81,1696	0/0:28,0:27:75.02:0,75,1499	1/1:0,30:30:69.24:1147,69,0	0/0:24,0:24:69.21:0,69,1456	0/0:23,0:23:66.23:0,66,1496	0/0:27,0:27:75.26:0,75,1655	0/0:22,0:22:66.23:0,66,1456	0/0:44,0:44:99:0,123,2775	0/0:19,0:19:54.17:0,54,1180	0/0:31,0:31:90.30:0,90,1997	0/0:29,0:29:87.30:0,87,1968	0/0:41,0:41:99:0,120,2679	0/0:33,0:33:96.33:0,96,2156	0/0:24,0:24:72.25:0,72,1632	0/0:19,0:19:57.20:0,57,1290	0/0:17,0:17:51.14:0,51,1108	1/1:1,18:18:48.16:797,48,0	1/1:1,26:27:69.24:1146,69,0	1/1:0,29:29:63.19:1039,63,0	0/0:32,0:32:96.33:0,96,2160	0/0:18,0:18:48.16:0,48,1088	0/0:29,0:29:87.30:0,87,1971	0/0:15,0:15:42.09:0,42,821	1/1:4,24:28:7.19:1077,7,0	1/1:0,27:27:78.27:1299,78,0	1/1:0,6:6:15.05:250,15,0
chr10	44889058	.	TG	T	4841.10	PASS	AB=0.937;AC=48;AF=0.857;AN=56;BaseQRankSum=3.672;DP=563;FS=7.069;HRun=10;HaplotypeScore=108.9213;InbreedingCoeff=0.7626;MQ=81.13;MQ0=0;MQRankSum=-2.317;QD=9.49;ReadPosRankSum=3.394;VQSLOD=3.6127;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,26:34:80.98:702,81,0	0/0:15,0:15:19.13:0,19,224	0/1:21,0:22:3.74:4,0,180	0/0:22,0:19:4.86:0,5,88	1/1:4,23:27:65.68:550,66,0	0/0:16,0:16:21.98:0,22,410	0/1:10,1:11:2.04:2,0,181	1/1:3,0:22:36.66:108,37,0	1/1:3,0:18:28.51:84,29,0	1/1:6,0:25:37.46:109,37,0	1/1:7,0:18:16.97:59,17,0	1/1:5,0:21:28.51:84,29,0	1/1:2,0:16:30.55:89,31,0	1/1:4,0:21:34.62:101,35,0	1/1:3,0:20:30.79:109,31,0	1/1:1,0:21:37.09:118,37,0	1/1:5,0:25:40.74:119,41,0	1/1:1,0:8:14.26:42,14,0	1/1:6,11:17:32.95:281,33,0	1/1:10,18:28:56.95:490,57,0	1/1:5,20:25:47.98:417,48,0	1/1:3,0:26:46.63:136,47,0	1/1:3,0:19:26.51:78,27,0	1/1:0,0:9:18.33:54,18,0	1/1:2,0:22:37.57:119,38,0	1/1:8,18:28:33.84:493,34,0	1/1:3,18:21:44.99:391,45,0	1/1:1,5:6:12:104,12,0
chr10	44889067	.	GGT	G	1238.45	PASS	AB=0.984;AC=15;AF=0.268;AN=56;BaseQRankSum=-5.610;DP=531;FS=4.456;HRun=0;HaplotypeScore=128.6914;InbreedingCoeff=0.7103;MQ=78.34;MQ0=0;MQRankSum=1.236;QD=7.28;ReadPosRankSum=3.032;VQSLOD=3.2157;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:81.36:0,81,435	0/0:14,0:14:36.09:0,36,506	0/1:22,0:22:7.78:8,0,336	0/0:17,0:15:16.06:0,16,231	0/0:24,0:24:59.44:0,59,348	0/0:22,0:22:39.19:0,39,813	0/0:10,0:10:29.95:0,30,396	0/0:24,0:24:54.77:0,55,271	1/1:15,0:15:35.50:155,35,0	0/0:21,0:21:27.52:0,28,196	0/0:15,0:15:7.27:0,7,112	1/1:16,0:16:38.19:213,38,0	1/1:16,1:17:16.05:157,16,0	1/1:18,1:19:23.60:210,24,0	0/0:17,0:17:24.86:0,25,83	0/0:22,0:22:40.20:0,40,164	1/1:22,2:24:13.05:244,13,0	0/0:10,0:10:24.14:0,24,111	0/0:13,0:13:35.01:0,35,212	0/0:23,0:23:49.98:0,50,319	0/0:25,0:25:57.95:0,58,354	1/1:25,1:26:20.37:233,20,0	0/1:19,1:20:22.53:159,0,23	0/1:11,0:11:20.18:52,0,20	0/0:22,0:22:27.49:0,27,133	0/0:24,0:24:45:0,45,305	0/0:20,0:20:52.09:0,52,289	0/0:5,0:5:11.48:0,11,60
chr10	44891215	.	CTT	C	8969.34	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=14.705;DP=633;FS=0.000;HRun=3;HaplotypeScore=99.8403;InbreedingCoeff=0.9995;MQ=84.98;MQ0=0;MQRankSum=-2.775;QD=41.52;ReadPosRankSum=1.489;VQSLOD=4.1862;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,29:30:81.27:1240,81,0	0/0:15,0:15:45.15:0,45,870	0/0:22,0:22:63.22:0,63,1193	0/0:22,0:22:53.29:0,53,978	1/1:0,35:35:96.33:1470,96,0	0/0:15,0:15:45.15:0,45,832	0/0:15,0:15:45.15:0,45,862	0/0:24,0:24:72.25:0,72,1392	0/0:20,0:20:60.19:0,60,1110	0/0:28,0:28:84.29:0,84,1607	0/0:24,0:24:72.23:0,72,1329	0/0:13,0:13:39.13:0,39,724	0/0:28,0:28:81.26:0,81,1484	0/0:24,0:24:72.25:0,72,1385	0/0:21,0:21:60.19:0,60,1121	0/0:16,0:16:45.15:0,45,865	0/0:18,0:18:51.13:0,51,916	0/0:12,0:12:36.12:0,36,696	1/1:1,10:11:30.10:455,30,0	1/1:0,39:39:99:1716,114,0	1/1:0,28:28:72.24:1103,72,0	0/0:25,0:25:75.26:0,75,1446	0/0:34,0:34:99:0,102,1953	0/0:19,0:19:57.18:0,57,1052	0/0:22,0:22:66.23:0,66,1275	1/1:1,29:30:32.31:1241,32,0	1/1:0,35:35:90.31:1378,90,0	1/1:0,8:8:24.08:367,24,0
chr10	44891709	.	GGACAAA	G	7264.68	PASS	AB=0.618;AC=15;AF=0.268;AN=56;BaseQRankSum=13.072;DP=611;FS=9.195;HRun=0;HaplotypeScore=161.1909;InbreedingCoeff=0.8980;MQ=87.35;MQ0=0;MQRankSum=-15.533;QD=39.27;ReadPosRankSum=-1.184;VQSLOD=4.1500;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,37:44:66.14:1298,66,0	0/0:9,0:9:24.06:0,24,576	0/0:33,0:33:92.91:0,93,2938	0/0:23,0:23:69.24:0,69,2219	1/1:2,24:26:48.16:916,48,0	0/0:12,0:12:33.11:0,33,1166	0/0:24,0:24:69.24:0,69,2322	0/0:18,0:18:48.16:0,48,1255	0/0:23,0:23:66.21:0,66,2113	0/0:30,0:30:81.22:0,81,2038	0/0:13,0:13:10.13:0,10,829	0/0:20,0:20:60.19:0,60,1973	0/0:24,0:24:72.25:0,72,2533	0/0:23,0:23:66.23:0,66,2273	0/0:20,0:20:60.20:0,60,1537	0/0:20,0:20:35.21:0,35,1492	0/0:25,0:25:72.09:0,72,1919	0/0:19,0:19:57.20:0,57,1518	1/1:9,4:13:21.07:418,21,0	1/1:3,25:28:69.19:1408,69,0	1/1:7,17:24:38.51:810,39,0	0/0:30,0:30:84.29:0,84,2931	0/0:19,0:19:57.20:0,57,1941	0/0:33,0:33:96.33:0,96,3339	0/0:8,0:8:21.07:0,21,539	0/1:8,13:21:99:898,0,106	1/1:2,20:22:48.16:1098,48,0	1/1:1,6:7:18.06:419,18,0
chr10	44891711	.	A	ACAC	3063.77	PASS	AB=0.870;AC=15;AF=0.268;AN=56;BaseQRankSum=6.413;DP=604;FS=14.500;HRun=0;HaplotypeScore=142.0751;InbreedingCoeff=0.8566;MQ=88.38;MQ0=0;MQRankSum=-12.003;QD=16.93;ReadPosRankSum=-5.838;VQSLOD=0.7430;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:41,3:44:31.86:586,32,0	0/0:8,0:8:24.03:0,24,243	0/0:34,0:34:96.29:0,96,1551	0/0:24,0:24:69.24:0,69,1177	1/1:25,0:25:23.56:584,24,0	0/0:11,0:11:33.11:0,33,563	0/0:23,0:23:69.24:0,69,1175	0/0:17,0:17:48.07:0,48,468	0/0:22,0:22:66.21:0,66,1081	0/0:28,0:28:84.09:0,84,787	0/0:13,0:13:10.10:0,10,322	0/0:20,0:20:60.19:0,60,997	0/0:25,0:25:75.24:0,75,1253	0/0:24,0:24:66.23:0,66,1120	0/0:20,0:20:60.13:0,60,622	0/0:20,0:20:35.15:0,35,583	0/0:25,0:25:72.01:0,72,759	0/0:19,0:19:57.14:0,57,601	1/1:10,3:13:15.49:443,15,0	1/1:27,1:28:16.24:501,16,0	1/1:19,4:23:32.32:712,32,0	0/0:29,0:29:84.29:0,84,1430	0/0:19,0:19:57.19:0,57,965	0/0:32,0:32:96.33:0,96,1638	0/0:10,0:9:24.03:0,24,239	0/1:17,3:20:40.31:222,0,40	1/1:22,0:22:14.97:197,15,0	1/1:6,0:6:1.82:7,2,0
chr10	44892162	.	C	CA	987.83	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-1.249;DP=572;FS=1.208;HRun=8;HaplotypeScore=63.8568;InbreedingCoeff=0.9830;MQ=69.59;MQ0=1;MQRankSum=0.871;QD=17.33;ReadPosRankSum=-0.492;VQSLOD=3.4705;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:75.03:0,75,686	1/1:0,6:6:18.05:208,18,0	0/0:26,1:19:12.87:0,13,276	0/0:24,0:20:29.65:0,30,259	0/0:23,0:23:57.01:0,57,517	0/0:20,0:20:57.03:0,57,522	0/0:9,0:9:21.01:0,21,192	1/1:9,20:29:57.15:647,57,0	0/0:11,0:11:33.02:0,33,302	0/0:33,0:33:81.02:0,81,738	0/0:18,0:18:48.02:0,48,439	0/0:15,0:15:42.02:0,42,384	0/0:20,0:20:54.02:0,54,494	0/0:12,0:12:33.02:0,33,302	0/0:12,0:12:30.01:0,30,274	0/0:19,0:19:51.02:0,51,466	1/1:1,0:22:53.97:274,54,0	0/0:18,0:18:44.99:0,45,404	0/0:26,0:26:68.99:0,69,619	0/0:39,0:39:99:0,105,960	0/0:11,0:11:33.02:0,33,302	0/0:26,0:25:66.02:0,66,603	0/0:23,0:23:66:0,66,597	0/0:15,0:15:42.02:0,42,384	0/0:21,0:21:60.03:0,60,549	0/0:28,0:28:78:0,78,705	0/0:29,0:29:84.05:0,84,768	0/0:8,0:7:18.01:0,18,165
chr10	44892464	.	CAATGAGAAG	C	5461.67	PASS	AB=0.641;AC=14;AF=0.250;AN=56;BaseQRankSum=12.572;DP=477;FS=1.061;HRun=0;HaplotypeScore=161.4609;InbreedingCoeff=0.7986;MQ=57.38;MQ0=3;MQRankSum=-11.785;QD=48.76;ReadPosRankSum=3.046;VQSLOD=4.8753;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,1:3:3.01:87,3,0	0/0:7,0:7:18.06:0,18,848	0/0:27,0:19:45.14:0,45,1838	0/0:16,0:12:30.57:0,31,1391	1/1:3,15:18:30.10:858,30,0	0/0:13,0:13:33.11:0,33,1483	0/0:16,0:16:36.12:0,36,1624	0/0:24,0:22:48.16:0,48,2122	0/0:19,0:19:51.13:0,51,2223	0/0:34,0:34:99:0,99,4550	0/0:20,0:20:45.15:0,45,2099	0/0:13,0:13:36.12:0,36,1648	0/0:21,0:21:54.19:0,54,2488	0/0:15,0:15:36.12:0,36,1527	0/0:10,0:10:24.08:0,24,1077	0/0:14,0:14:42.14:0,42,1916	0/0:30,0:30:63.22:0,63,2843	0/0:15,0:15:39.13:0,39,1675	0/1:12,7:18:1.29:626,0,1	1/1:9,9:16:21.07:612,21,0	1/1:4,4:8:9.03:215,9,0	0/0:18,0:18:54.19:0,54,2544	0/0:14,0:14:36.11:0,36,1505	0/0:16,0:16:45.15:0,45,2021	0/0:23,0:23:69.20:0,69,3087	0/1:3,13:16:99:1051,0,168	1/1:4,20:24:57.20:1662,57,0	1/1:2,4:5:12.04:350,12,0
chr10	44892600	.	CCATAAA	C	4731.61	PASS	AB=0.619;AC=15;AF=0.268;AN=56;BaseQRankSum=10.835;DP=475;FS=1.587;HRun=0;HaplotypeScore=99.0694;InbreedingCoeff=0.8482;MQ=57.14;MQ0=10;MQRankSum=-10.211;QD=42.25;ReadPosRankSum=-0.206;VQSLOD=4.7235;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:5,8:13:61.77:455,0,62	0/0:6,0:6:15.05:0,15,519	0/0:31,0:12:36.12:0,36,1092	0/0:25,0:4:12.04:0,12,329	1/1:4,17:21:39.09:827,39,0	0/0:9,0:9:27.09:0,27,941	0/0:14,0:14:36.12:0,36,1130	0/0:32,0:31:81.28:0,81,2750	0/0:15,0:15:39.12:0,39,1268	0/0:27,0:27:72.25:0,72,2376	0/0:20,0:20:57.20:0,57,1801	0/0:11,0:11:33.11:0,33,1083	0/0:15,0:15:42.13:0,42,1371	0/0:20,0:20:57.20:0,57,1882	0/0:9,0:9:24.08:0,24,802	0/0:8,0:8:24.08:0,24,834	0/0:38,0:38:99:0,108,3654	0/0:20,0:20:57.20:0,57,1955	1/1:1,10:11:30.10:598,30,0	1/1:4,17:20:48.16:1062,48,0	1/1:2,4:6:6.02:121,6,0	0/0:14,0:14:39.13:0,39,1359	0/0:20,0:20:57.20:0,57,1915	0/0:15,0:15:39.13:0,39,1355	0/0:14,0:14:39.13:0,39,1300	1/1:4,10:14:30.09:641,30,0	1/1:4,18:22:42.14:959,42,0	1/1:3,1:4:3.01:69,3,0
chr10	44892788	.	G	GA	4840.87	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=12.160;DP=495;FS=7.012;HRun=8;HaplotypeScore=65.7075;InbreedingCoeff=0.9792;MQ=45.51;MQ0=14;MQRankSum=-2.211;QD=26.31;ReadPosRankSum=-0.671;VQSLOD=5.2982;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,16:17:38.74:450,39,0	0/0:7,0:7:14.95:0,15,127	0/0:23,0:6:15.01:0,15,137	0/0:15,0:9:16.75:0,17,191	1/1:6,24:30:63.10:697,63,0	0/0:14,0:14:36.01:0,36,325	0/0:12,0:12:27.01:0,27,247	0/0:6,0:15:9.16:0,9,47	0/0:12,0:12:27.01:0,27,247	0/0:23,0:23:57.02:0,57,522	0/0:24,0:24:65.97:0,66,595	0/0:9,0:9:21.01:0,21,192	0/0:17,0:16:42.02:0,42,384	0/0:10,0:10:27.01:0,27,247	0/0:16,0:16:45.02:0,45,411	0/0:6,0:6:18:0,18,161	0/0:20,0:20:47.96:0,48,426	0/0:16,0:17:44.02:0,44,383	1/1:4,22:23:66.18:750,66,0	1/1:1,26:26:60.14:677,60,0	1/1:0,9:9:27.08:312,27,0	0/0:20,0:20:47.74:0,48,418	0/0:17,0:17:42.01:0,42,384	0/0:9,0:9:17.69:0,18,148	0/0:21,0:20:54.02:0,54,494	1/1:1,18:19:54.16:622,54,0	1/1:4,33:36:87.21:988,87,0	1/1:3,14:17:30.09:346,30,0
chr10	44893190	.	TA	T	1030.60	PASS	AC=16;AF=0.400;AN=40;BaseQRankSum=8.154;DP=372;FS=0.676;HRun=6;HaplotypeScore=49.0913;InbreedingCoeff=0.8124;MQ=35.84;MQ0=66;MQRankSum=-9.111;QD=15.86;ReadPosRankSum=1.236;VQSLOD=2.9421;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	1/1:0,2:2:3.01:32,3,0	0/0:33,0:1:3.01:0,3,35	0/0:37,0:2:3.01:0,3,39	1/1:2,4:4:6.01:64,6,0	0/0:26,0:24:48.16:0,48,631	0/0:20,0:12:18.06:0,18,237	./.	0/0:23,0:22:51.17:0,51,671	1/1:3,8:7:18.04:193,18,0	1/1:3,12:13:30.08:322,30,0	0/0:18,0:17:39.04:0,39,474	0/0:14,0:14:30.09:0,30,381	0/0:18,0:17:39.06:0,39,477	./.	./.	0/0:31,0:28:51.12:0,51,638	./.	./.	1/1:1,15:12:18.05:193,18,0	./.	0/0:18,0:17:45.10:0,45,572	0/0:31,0:31:81.18:0,81,1003	0/0:18,2:20:42.09:0,42,533	1/1:1,11:10:27.07:290,27,0	1/1:0,2:2:6.02:64,6,0	1/1:0,1:1:3.01:32,3,0	./.
chr10	44895062	.	G	GA	1623.56	PASS	AB=0.900;AC=15;AF=0.268;AN=56;BaseQRankSum=2.610;DP=330;FS=5.949;HRun=8;HaplotypeScore=65.2904;InbreedingCoeff=0.8270;MQ=66.55;MQ0=3;MQRankSum=-6.183;QD=20.55;ReadPosRankSum=-0.260;VQSLOD=3.5515;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:43.83:0,44,389	1/1:0,6:6:15.04:173,15,0	0/0:22,0:15:18.82:0,19,206	0/0:18,0:12:10.80:0,11,112	0/0:7,0:7:12.01:0,12,110	0/0:4,0:4:9:0,9,82	0/0:12,0:11:4.26:0,4,148	0/0:17,0:17:51.03:0,51,466	0/0:16,1:17:16.41:0,16,398	1/1:1,5:6:14.17:158,14,0	1/1:3,19:20:48.10:532,48,0	0/0:5,0:5:15.01:0,15,137	0/0:12,0:12:36.02:0,36,329	0/0:17,0:15:38.94:0,39,347	1/1:2,6:8:18.05:208,18,0	1/1:1,4:5:12.04:137,12,0	0/0:18,1:19:7.39:0,7,309	1/1:0,5:5:12.04:138,12,0	0/0:7,0:7:18:0,18,165	0/0:12,0:12:27:0,27,246	0/0:6,0:6:18.01:0,18,165	0/0:13,0:13:30.02:0,30,274	0/0:21,0:21:63.04:0,63,576	0/0:9,0:9:24:0,24,215	1/1:5,13:17:43.31:462,43,0	0/1:8,1:9:7.55:8,0,192	0/0:13,0:13:32.27:0,32,299	0/0:3,0:3:9:0,9,82
chr10	44895117	.	A	AG	418.34	PASS	AB=0.881;AC=14;AF=0.259;AN=54;BaseQRankSum=8.877;DP=365;FS=5.171;HRun=0;HaplotypeScore=145.0050;InbreedingCoeff=0.0714;MQ=57.33;MQ0=23;MQRankSum=-8.547;QD=3.84;ReadPosRankSum=1.926;VQSLOD=3.3894;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:8,2:10:41.97:42,0,53	1/1:5,0:5:8.83:53,9,0	0/0:43,0:10:23.31:0,23,166	0/0:33,0:9:12.11:0,12,84	0/0:1,0:1:0:0,0,0	0/0:9,0:8:23.97:0,24,217	0/0:16,0:15:40.56:0,41,398	0/0:13,0:8:23.81:0,24,169	0/0:18,0:18:48.09:0,48,478	0/1:12,0:12:25.19:69,0,25	0/1:18,0:16:60.14:60,0,77	0/0:9,0:9:26.97:0,27,244	0/0:11,0:11:27.03:0,27,269	0/0:18,0:17:50.95:0,51,480	0/1:16,0:16:20.91:116,0,21	1/1:8,0:7:14.88:75,15,0	0/0:29,0:29:62.81:0,63,503	0/0:1,0:1:2.98:0,3,21	0/1:6,1:5:6.49:6,0,29	0/1:1,1:2:4.96:5,0,12	0/1:3,1:4:4.35:26,0,4	0/0:13,0:13:38.92:0,39,384	0/0:29,0:29:83.58:0,84,794	0/0:13,0:13:32:0,32,288	0/1:13,0:12:26.13:84,0,26	0/1:7,1:8:17.88:18,0,49	0/1:4,2:6:19.66:20,0,38	./.
chr10	44895120	.	A	AGAAAG	576.89	PASS	AB=0.923;AC=11;AF=0.204;AN=54;BaseQRankSum=7.616;DP=379;FS=13.350;HRun=0;HaplotypeScore=180.6571;InbreedingCoeff=-0.0997;MQ=55.30;MQ0=23;MQRankSum=-7.394;QD=5.44;ReadPosRankSum=3.320;VQSLOD=1.9737;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:8,2:10:40.61:137,0,41	0/0:6,0:6:2.57:0,3,14	0/0:40,0:9:9.96:0,10,94	0/0:34,0:9:6.66:0,7,114	0/0:2,0:2:2.84:0,3,14	0/0:9,0:8:21.05:0,21,317	0/0:17,0:16:45.13:0,45,770	0/0:15,0:9:20.13:0,20,220	0/0:15,0:15:25.74:0,26,529	0/1:12,0:12:36.48:59,0,36	0/1:18,0:16:47.50:51,0,47	0/0:11,0:11:30.07:0,30,431	0/0:11,0:11:27.02:0,27,387	0/0:19,0:18:48.01:0,48,631	0/1:16,0:16:31.98:32,0,38	1/1:8,0:7:3.45:19,3,0	0/0:29,0:29:63.12:0,63,931	0/0:1,0:1:2.98:0,3,21	0/1:7,1:6:7.09:85,0,7	0/1:3,1:4:11.41:65,0,11	0/0:6,0:6:0.38:0,0,11	0/0:13,0:13:32.80:0,33,456	0/0:31,0:31:77.63:0,78,1037	0/0:13,0:13:33.05:0,33,503	0/1:13,0:12:17.69:72,0,18	0/1:8,1:9:16.21:102,0,16	0/1:7,1:8:22.22:95,0,22	./.
chr10	44895132	.	AG	A	1844.84	PASS	AB=0.799;AC=20;AF=0.385;AN=52;BaseQRankSum=6.524;DP=373;FS=1.073;HRun=2;HaplotypeScore=92.9038;InbreedingCoeff=0.2624;MQ=45.03;MQ0=26;MQRankSum=-6.007;QD=10.73;ReadPosRankSum=-0.787;VQSLOD=1.4185;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:5,6:11:11.37:248,0,11	1/1:1,5:6:12.04:154,12,0	0/0:32,1:3:5.81:0,6,53	0/0:28,0:5:11.73:0,12,120	1/1:0,3:3:5.98:58,6,0	0/0:7,0:6:18.05:0,18,250	0/0:18,0:17:26:0,26,605	0/1:19,6:16:99:111,0,376	0/0:12,0:12:11.62:0,12,373	0/1:13,2:15:29.73:30,0,230	0/1:18,2:18:92.65:93,0,211	0/0:9,0:9:27.09:0,27,404	0/0:13,0:13:32.89:0,33,427	0/0:13,0:12:33.08:0,33,433	0/1:12,5:17:99:190,0,144	0/1:6,2:7:69.33:69,0,71	0/0:31,0:31:64.91:0,65,996	./.	1/1:6,7:10:11.30:205,11,0	1/1:2,9:11:3.06:229,3,0	1/1:2,5:7:11.97:134,12,0	0/0:9,0:9:24.05:0,24,332	0/0:16,0:16:42.10:0,42,572	0/0:12,0:12:24.89:0,25,314	0/1:13,3:15:88.85:89,0,102	0/1:7,4:11:84.53:148,0,85	1/1:4,5:9:19.67:264,20,0	./.
chr10	44895133	.	G	GAAA	3509.19	PASS	AB=0.988;AC=21;AF=0.404;AN=52;BaseQRankSum=7.286;DP=371;FS=2.239;HRun=3;HaplotypeScore=99.2285;InbreedingCoeff=0.3129;MQ=45.21;MQ0=26;MQRankSum=-7.242;QD=20.40;ReadPosRankSum=1.067;VQSLOD=0.6300;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:9,2:11:5.01:382,5,0	1/1:6,0:6:12.04:226,12,0	0/0:32,0:3:5.95:0,6,58	0/0:28,0:5:11.08:0,11,134	1/1:3,0:3:5.98:75,6,0	0/0:8,0:7:18.05:0,18,293	0/0:17,0:16:26.01:0,26,687	0/1:25,0:16:99:144,0,263	0/0:11,0:11:1.54:0,2,422	0/1:15,0:14:99:171,0,102	0/1:20,0:18:99:228,0,196	0/0:9,0:9:27.09:0,27,490	0/0:14,0:14:33.02:0,33,461	0/0:14,0:13:33.08:0,33,464	0/1:17,0:17:92.58:402,0,93	0/1:8,0:7:37.26:181,0,37	0/0:30,0:30:73.28:0,73,1166	./.	1/1:12,1:10:4.03:312,4,0	1/1:10,1:11:17.53:288,18,0	1/1:7,0:7:11.56:182,12,0	0/0:8,0:8:24.05:0,24,354	0/0:16,0:16:42.11:0,42,678	0/0:12,0:12:27.88:0,28,411	0/1:16,0:15:45.78:302,0,46	0/1:10,1:11:27.56:244,0,28	1/1:8,1:9:24.46:371,24,0	./.
chr10	44895134	.	GA	G	950.87	PASS	AB=0.977;AC=16;AF=0.308;AN=52;BaseQRankSum=9.788;DP=374;FS=0.510;HRun=3;HaplotypeScore=95.8322;InbreedingCoeff=-0.0764;MQ=45.20;MQ0=26;MQRankSum=-6.520;QD=5.37;ReadPosRankSum=2.266;VQSLOD=0.4191;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:13,0:13:89.60:90,0,91	1/1:6,0:6:11.90:83,12,0	0/0:32,0:3:5.20:0,5,29	0/0:27,0:5:11.46:0,11,89	1/1:3,0:3:4.23:25,4,0	0/0:8,0:7:18.05:0,18,241	0/0:16,1:16:8.12:0,8,567	0/1:25,0:16:23.44:23,0,424	0/0:11,0:11:27.87:0,28,406	0/1:15,0:14:8.29:8,0,145	0/1:17,3:18:99:181,0,173	0/0:9,0:9:27.09:0,27,389	0/0:14,0:14:36.09:0,36,478	0/0:14,0:13:36.09:0,36,463	0/1:14,3:17:99:200,0,104	0/1:8,0:7:46.84:59,0,47	0/0:30,0:30:71.62:0,72,961	./.	0/1:14,0:10:16.86:48,0,17	0/1:12,0:12:16.22:96,0,16	0/1:7,0:7:4:35,0,4	0/0:9,0:9:27.07:0,27,350	0/0:16,0:16:35.71:0,36,485	0/0:10,0:10:18.05:0,18,259	0/1:17,0:16:48.95:130,0,49	0/1:11,0:11:47.49:47,0,176	0/1:9,0:9:5.91:83,0,6	./.
chr10	44895135	.	A	AAGG	1588.87	PASS	AB=0.931;AC=16;AF=0.308;AN=52;BaseQRankSum=10.226;DP=379;FS=0.000;HRun=0;HaplotypeScore=111.7546;InbreedingCoeff=-0.1364;MQ=43.29;MQ0=26;MQRankSum=-7.343;QD=9.18;ReadPosRankSum=3.893;VQSLOD=2.6704;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:13,0:13:99:113,0,113	1/1:6,0:6:11.88:79,12,0	0/0:31,0:2:5.94:0,6,41	0/0:27,0:5:8.97:0,9,95	1/1:4,0:4:4.23:25,4,0	0/0:7,0:6:18.05:0,18,289	0/1:17,0:16:10.81:11,0,689	0/0:25,0:16:20.82:0,21,501	0/0:11,0:11:31.66:0,32,491	0/1:10,5:14:99:186,0,119	0/1:19,2:19:99:358,0,187	0/0:10,0:10:27.09:0,27,476	0/0:14,0:14:36.10:0,36,553	0/0:15,0:14:36.03:0,36,519	0/1:18,0:18:98.81:224,0,99	0/1:6,2:7:39.82:180,0,40	0/0:30,0:30:68.88:0,69,1129	./.	0/1:14,0:10:10.87:57,0,11	0/1:12,0:12:23.30:33,0,23	0/1:7,0:7:8.98:18,0,9	0/0:9,0:9:27.08:0,27,432	0/0:16,0:16:36.11:0,36,605	0/0:11,0:11:1.45:0,1,297	0/1:10,7:16:57.93:382,0,58	0/1:11,0:11:22.64:23,0,198	0/1:10,0:10:56.34:57,0,56	./.
chr10	44895174	.	G	GA	340.88	PASS	AB=0.812;AC=5;AF=0.089;AN=56;BaseQRankSum=6.837;DP=404;FS=0.000;HRun=3;HaplotypeScore=97.5872;InbreedingCoeff=-0.1059;MQ=47.55;MQ0=1;MQRankSum=-5.498;QD=4.26;ReadPosRankSum=-0.489;VQSLOD=-0.1061;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:51.12:0,51,712	0/0:9,0:9:21.07:0,21,264	0/0:18,0:6:15.01:0,15,188	0/0:16,0:9:26.98:0,27,342	0/0:18,0:18:45.15:0,45,627	0/0:7,0:7:18.06:0,18,252	0/0:15,0:15:45.15:0,45,622	0/0:20,0:19:52.90:0,53,613	0/0:17,0:17:51.17:0,51,712	0/1:12,2:14:49.11:49,0,379	0/1:20,6:23:99:105,0,657	0/0:9,0:9:27.09:0,27,371	0/0:12,0:12:36.12:0,36,503	0/0:13,0:13:39.13:0,39,531	0/1:8,5:13:99:124,0,234	0/1:7,1:8:18.88:19,0,221	0/0:28,0:28:75.25:0,75,1046	0/0:3,0:3:8.94:0,9,101	0/0:13,0:12:36.12:0,36,502	0/0:16,0:16:36.02:0,36,502	0/0:15,0:15:45.15:0,45,623	0/0:13,0:13:36.12:0,36,500	0/0:12,0:12:33.09:0,33,433	0/0:15,0:16:40.02:0,40,547	0/1:13,6:18:99:162,0,254	0/0:11,0:11:30.10:0,30,415	0/0:20,0:20:57.19:0,57,790	0/0:2,0:2:6.02:0,6,83
chr10	44895179	.	AGC	A	290.55	PASS	AB=0.818;AC=5;AF=0.089;AN=56;BaseQRankSum=6.785;DP=417;FS=0.955;HRun=0;HaplotypeScore=104.8967;InbreedingCoeff=-0.1066;MQ=48.03;MQ0=1;MQRankSum=-5.541;QD=3.46;ReadPosRankSum=-2.325;VQSLOD=2.2231;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:57.20:0,57,1134	0/0:9,0:9:21.07:0,21,426	0/0:15,0:6:14.59:0,15,222	0/0:16,0:9:27.09:0,27,507	0/0:19,0:19:48.16:0,48,959	0/0:6,0:6:18.06:0,18,366	0/0:16,0:16:48.16:0,48,972	0/0:22,0:21:63.13:0,63,1196	0/0:19,0:19:57.20:0,57,1149	0/1:13,2:15:56.44:56,0,608	0/1:22,6:25:60.70:61,0,1046	0/0:8,0:8:24.08:0,24,486	0/0:12,0:12:36.12:0,36,731	0/0:14,0:14:42.14:0,42,852	0/1:9,5:14:99:134,0,456	0/1:7,1:8:22.83:23,0,383	0/0:29,0:29:75.19:0,75,1439	0/0:3,0:3:8.06:0,8,127	0/0:16,0:14:42.14:0,42,833	0/0:15,0:15:36.12:0,36,729	0/0:15,0:15:42.14:0,42,852	0/0:13,0:13:39.13:0,39,785	0/0:11,0:11:30.10:0,30,596	0/0:19,0:19:46.57:0,47,965	0/1:13,6:18:99:134,0,478	0/0:11,0:11:33.11:0,33,669	0/0:21,0:21:63.22:0,63,1273	0/0:2,0:2:6.02:0,6,122
chr10	44895303	.	GAAGCAGAA	G	1637.62	PASS	AB=0.716;AC=10;AF=0.192;AN=52;BaseQRankSum=8.035;DP=496;FS=29.977;HRun=0;HaplotypeScore=149.0719;InbreedingCoeff=0.6806;MQ=62.96;MQ0=4;MQRankSum=-6.426;QD=27.76;ReadPosRankSum=0.801;VQSLOD=1.3286;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,8:12:15.05:373,15,0	0/0:13,0:13:33.11:0,33,1376	0/0:21,0:19:42.14:0,42,1220	0/0:28,0:20:28.92:0,29,1349	1/1:5,3:7:7.77:231,8,0	0/0:16,0:15:39.13:0,39,1504	0/0:22,0:22:63.17:0,63,2432	0/0:31,0:28:66.23:0,66,2353	0/0:20,0:20:51.18:0,51,2083	0/0:34,0:34:87.30:0,87,3292	0/0:29,0:29:81.23:0,81,3064	0/0:14,0:14:30.10:0,30,1210	0/0:20,0:20:57.20:0,57,2330	0/0:23,0:23:57.20:0,57,2396	0/0:23,0:23:66.23:0,66,2737	0/0:11,0:11:33.11:0,33,1182	0/0:19,0:19:48.16:0,48,1902	0/0:9,0:9:18.06:0,18,705	0/1:9,4:10:76.44:308,0,76	1/1:4,8:12:21.17:493,21,0	./.	0/0:19,0:19:48.16:0,48,1837	0/0:19,0:19:54.19:0,54,2199	0/0:35,0:35:96.31:0,96,3760	0/0:25,0:25:69.14:0,69,2566	0/1:4,4:8:99:303,0,136	1/1:5,1:6:3.90:82,4,0	./.
chr10	44895312	.	AAGC	A	378.25	PASS	AB=0.952;AC=9;AF=0.173;AN=52;BaseQRankSum=9.324;DP=476;FS=33.004;HRun=0;HaplotypeScore=113.0603;InbreedingCoeff=0.5823;MQ=62.57;MQ0=3;MQRankSum=-7.874;QD=6.88;ReadPosRankSum=0.039;VQSLOD=0.9652;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,0:9:10.93:76,11,0	0/0:13,0:13:39.13:0,39,880	0/0:16,0:15:42.06:0,42,777	0/0:25,0:21:49.32:0,49,993	1/1:8,1:8:19.29:116,19,0	0/0:14,0:13:36.12:0,36,830	0/0:23,0:23:66.23:0,66,1499	0/0:36,0:35:99:0,99,2153	0/0:18,0:18:54.17:0,54,1189	0/0:33,0:33:96.29:0,96,2097	0/0:28,0:28:81.25:0,81,1731	0/0:14,0:14:42.14:0,42,959	0/0:21,0:21:63.20:0,63,1367	0/0:20,0:20:60.21:0,60,1383	0/0:22,0:22:66.23:0,66,1492	0/0:12,0:12:33.11:0,33,679	0/0:19,0:19:48.15:0,48,1062	0/0:9,0:9:24.08:0,24,497	0/1:13,0:8:52.87:53,0,144	0/1:10,2:12:8.05:162,0,8	./.	0/0:19,0:19:57.17:0,57,1200	0/0:20,0:20:60.21:0,60,1381	0/0:31,0:31:90.31:0,90,2054	0/0:27,0:27:72.15:0,72,1567	0/1:9,0:9:55.29:55,0,162	1/1:2,1:3:8.19:64,8,0	./.
chr10	44895320	.	GCAAA	G	116.21	PASS	AB=0.874;AC=4;AF=0.077;AN=52;BaseQRankSum=5.658;DP=492;FS=24.681;HRun=0;HaplotypeScore=132.2774;InbreedingCoeff=-0.0432;MQ=63.02;MQ0=1;MQRankSum=-3.542;QD=3.75;ReadPosRankSum=-0.943;VQSLOD=0.8160;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:8,0:8:8.57:9,0,88	0/0:16,0:16:48.14:0,48,1203	0/0:15,0:15:42.12:0,42,974	0/0:24,0:24:55.41:0,55,1330	0/1:7,1:7:57.48:94,0,57	0/0:14,0:13:39.12:0,39,1002	0/0:21,0:21:63.22:0,63,1784	0/0:37,0:37:99:0,108,2732	0/0:20,0:20:60.21:0,60,1633	0/0:33,0:33:99:0,99,2517	0/0:28,0:28:78.22:0,78,2008	0/0:17,0:17:51.16:0,51,1398	0/0:24,0:24:72.25:0,72,2005	0/0:21,0:21:63.22:0,63,1752	0/0:22,0:22:66.23:0,66,1808	0/0:10,0:10:30.10:0,30,751	0/0:21,0:21:63.13:0,63,1566	0/0:9,0:9:27.09:0,27,701	0/0:14,0:9:18.71:0,19,235	0/1:10,2:12:62.65:63,0,179	./.	0/0:20,0:20:60.19:0,60,1583	0/0:23,0:23:69.22:0,69,1915	0/0:32,0:32:96.33:0,96,2766	0/0:28,0:28:81.19:0,81,1956	0/0:9,0:9:2.37:0,2,278	0/1:2,1:3:9.73:56,0,10	./.
chr10	44895322	.	A	AG	148.56	PASS	AB=0.800;AC=4;AF=0.077;AN=52;BaseQRankSum=4.299;DP=505;FS=10.578;HRun=0;HaplotypeScore=102.9757;InbreedingCoeff=-0.0831;MQ=61.85;MQ0=1;MQRankSum=-4.484;QD=5.12;ReadPosRankSum=-1.780;VQSLOD=1.9429;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:7,1:8:27.92:28,0,167	0/0:15,0:15:45.15:0,45,627	0/0:17,0:16:22.90:0,23,459	0/0:24,0:22:60.02:0,60,673	0/1:5,3:7:51.27:137,0,51	0/0:15,0:14:36.10:0,36,484	0/0:22,0:22:66.20:0,66,891	0/0:37,0:37:99:0,108,1440	0/0:20,0:20:60.20:0,60,835	0/0:35,0:35:99:0,102,1371	0/0:30,0:30:75.24:0,75,1028	0/0:17,0:17:51.16:0,51,696	0/0:25,0:25:72.23:0,72,990	0/0:21,0:21:63.19:0,63,850	0/0:22,0:22:66.22:0,66,921	0/0:10,0:10:30.07:0,30,397	0/0:24,0:24:60.13:0,60,794	0/0:9,0:9:27.09:0,27,376	0/0:15,0:10:23.30:0,23,222	0/0:12,0:12:24.63:0,25,186	./.	0/0:21,0:21:60.19:0,60,822	0/0:22,0:22:66.22:0,66,922	0/0:35,0:35:99:0,102,1395	0/0:27,0:28:78.16:0,78,1015	0/1:8,2:10:52.91:53,0,196	0/1:2,1:3:29.58:39,0,30	./.
chr10	44895376	.	CAGGAAAGA	C	970.60	PASS	AB=0.902;AC=5;AF=0.093;AN=54;BaseQRankSum=7.884;DP=520;FS=14.054;HRun=0;HaplotypeScore=188.6414;InbreedingCoeff=-0.0856;MQ=56.89;MQ0=2;MQRankSum=-7.385;QD=15.41;ReadPosRankSum=0.622;VQSLOD=1.8761;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:2,1:3:10.82:80,0,11	0/0:15,0:15:45.15:0,45,1866	0/0:19,0:18:50.56:0,51,1246	0/0:24,0:21:62.64:0,63,1686	0/1:11,3:13:57.38:416,0,57	0/0:17,0:17:51.16:0,51,1940	0/0:22,0:22:66.21:0,66,2660	0/0:32,0:32:90.29:0,90,3149	0/0:23,0:23:66.23:0,66,2829	0/0:36,0:36:96.29:0,96,3990	0/0:23,0:23:66.14:0,66,2603	0/0:25,0:25:75.26:0,75,3218	0/0:22,0:22:66.19:0,66,2650	0/0:15,0:15:42.13:0,42,1587	0/0:19,0:19:51.12:0,51,1736	0/0:14,0:14:42.14:0,42,1771	0/0:23,0:23:46.81:0,47,2438	0/0:14,0:14:42.14:0,42,1792	0/0:3,0:3:5.97:0,6,74	0/1:21,0:21:99:231,0,300	0/0:1,0:1:3.01:0,3,53	0/0:25,0:25:68.97:0,69,2863	0/0:33,0:33:99:0,99,4253	0/0:28,0:28:84.28:0,84,3425	0/0:24,0:24:69.24:0,69,2915	0/1:10,0:10:99:100,0,240	0/1:14,1:15:99:259,0,230	./.
chr10	44895378	.	GGA	G	225.73	PASS	AB=0.899;AC=6;AF=0.111;AN=54;BaseQRankSum=7.338;DP=516;FS=7.880;HRun=0;HaplotypeScore=125.3347;InbreedingCoeff=0.1427;MQ=56.70;MQ0=2;MQRankSum=-6.432;QD=3.47;ReadPosRankSum=0.600;VQSLOD=2.1173;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:3,0:3:5.96:43,6,0	0/0:15,0:15:45.15:0,45,913	0/0:18,1:18:50.78:0,51,805	0/0:24,0:21:58.07:0,58,1024	0/1:12,3:14:47.34:143,0,47	0/0:17,0:17:51.16:0,51,975	0/0:23,0:23:66.21:0,66,1290	0/0:30,0:30:90.29:0,90,1738	0/0:22,0:22:66.23:0,66,1331	0/0:34,0:34:99:0,99,1904	0/0:24,0:24:69.15:0,69,1333	0/0:25,0:25:75.26:0,75,1512	0/0:22,0:22:66.19:0,66,1298	0/0:14,0:14:42.13:0,42,790	0/0:19,0:19:57.14:0,57,1041	0/0:14,0:14:42.14:0,42,836	0/0:22,1:23:32.10:0,32,1177	0/0:14,0:14:42.14:0,42,848	0/0:2,0:2:2.45:0,2,58	0/1:19,2:21:99:100,0,247	0/0:1,0:1:3.01:0,3,52	0/0:24,0:24:69.19:0,69,1397	0/0:34,0:34:99:0,102,2052	0/0:28,0:28:84.28:0,84,1659	0/0:23,0:23:69.24:0,69,1394	0/1:9,1:10:23.84:24,0,247	0/1:15,1:16:36.76:37,0,300	./.
chr10	44895384	.	A	AAGC	520.90	PASS	AB=0.886;AC=6;AF=0.111;AN=54;BaseQRankSum=7.148;DP=522;FS=7.729;HRun=0;HaplotypeScore=143.4223;InbreedingCoeff=0.0369;MQ=54.74;MQ0=4;MQRankSum=-6.263;QD=7.44;ReadPosRankSum=-0.165;VQSLOD=2.5976;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:3,0:3:0.89:2,1,0	0/0:16,0:16:45.10:0,45,705	0/0:22,0:19:37.94:0,38,568	0/0:25,0:21:53.69:0,54,642	0/1:12,4:15:90.53:284,0,91	0/0:16,0:16:48.15:0,48,792	0/0:25,0:25:65.87:0,66,1055	0/0:25,0:25:69.21:0,69,1080	0/0:22,0:22:66.20:0,66,1075	0/0:33,0:32:93.31:0,93,1532	0/0:22,0:22:66.12:0,66,1019	0/0:24,0:24:69.24:0,69,1176	0/0:22,0:22:63.20:0,63,1049	0/0:14,0:14:39.09:0,39,586	0/0:16,0:15:39.13:0,39,663	0/0:15,0:14:42.14:0,42,709	0/0:24,0:24:65.83:0,66,1071	0/0:15,0:15:45.13:0,45,738	0/0:2,0:1:3.01:0,3,51	0/1:20,3:23:99:223,0,385	0/0:1,0:1:3.01:0,3,50	0/0:27,0:27:75.25:0,75,1248	0/0:34,0:34:99:0,102,1677	0/0:27,0:27:69.24:0,69,1176	0/0:24,0:24:72.18:0,72,1144	0/1:10,1:11:38.62:39,0,245	0/1:16,1:17:82.92:83,0,333	./.
chr10	44895395	.	AATC	A	56.03	PASS	AB=0.892;AC=5;AF=0.093;AN=54;BaseQRankSum=5.768;DP=518;FS=6.153;HRun=0;HaplotypeScore=137.0818;InbreedingCoeff=0.1703;MQ=55.21;MQ0=6;MQRankSum=-4.524;QD=1.33;ReadPosRankSum=-0.434;VQSLOD=2.0910;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:1,1:2:3.01:37,3,0	0/0:13,0:13:38.34:0,38,548	0/0:25,0:20:50.92:0,51,969	0/0:22,0:15:42.13:0,42,785	0/1:12,3:15:86.58:87,0,253	0/0:19,0:19:57.20:0,57,1302	0/0:28,0:28:79.90:0,80,1721	0/0:24,0:24:72.25:0,72,1607	0/0:25,0:25:75.26:0,75,1740	0/0:31,0:30:87.30:0,87,1868	0/0:21,0:20:57.20:0,57,1308	0/0:26,0:26:75.26:0,75,1740	0/0:24,0:24:72.25:0,72,1665	0/0:16,0:16:48.16:0,48,1126	0/0:12,0:11:33.10:0,33,690	0/0:16,0:13:39.13:0,39,921	0/0:24,0:24:52.34:0,52,1523	0/0:15,0:15:45.15:0,45,1053	0/0:4,0:3:2.74:0,3,42	0/0:24,0:23:31.25:0,31,740	0/0:1,0:1:3.01:0,3,44	0/0:24,0:24:69.24:0,69,1615	0/0:32,0:32:96.31:0,96,2154	0/0:27,0:27:81.24:0,81,1790	0/0:22,0:21:57.20:0,57,1329	0/1:8,1:9:29.45:29,0,295	0/1:15,1:16:12.77:13,0,375	./.
chr10	44895396	.	A	AGAAG	135.15	PASS	AB=0.923;AC=5;AF=0.093;AN=54;BaseQRankSum=6.038;DP=520;FS=0.000;HRun=0;HaplotypeScore=148.7551;InbreedingCoeff=0.0462;MQ=55.23;MQ0=6;MQRankSum=-5.120;QD=2.37;ReadPosRankSum=0.507;VQSLOD=2.0792;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,0:2:0.47:1,0,0	0/0:13,0:13:39.11:0,39,495	0/0:26,0:21:54.05:0,54,920	0/0:21,0:14:42.06:0,42,718	0/1:14,1:15:93.58:94,0,190	0/0:19,0:19:57.20:0,57,1136	0/0:28,0:28:83.99:0,84,1566	0/0:24,0:24:72.24:0,72,1400	0/0:25,0:25:75.24:0,75,1521	0/0:31,0:30:87.30:0,87,1695	0/0:20,0:19:57.20:0,57,1173	0/0:27,0:27:75.25:0,75,1522	0/0:24,0:24:72.22:0,72,1411	0/0:17,0:17:48.16:0,48,989	0/0:12,0:11:33.10:0,33,625	0/0:16,0:13:39.13:0,39,817	0/0:25,0:25:69.62:0,70,1374	0/0:15,0:15:45.15:0,45,942	0/0:5,0:3:1.56:0,2,56	0/1:21,3:23:93.20:93,0,599	0/0:1,0:1:3.01:0,3,53	0/0:24,0:24:69.24:0,69,1434	0/0:32,0:32:96.28:0,96,1878	0/0:27,0:27:81.24:0,81,1600	0/0:22,0:21:57.20:0,57,1185	0/0:9,0:9:0.02:0,0,281	0/1:15,1:16:46.36:46,0,388	./.
chr10	44895434	.	GA	G	492	PASS	AB=0.710;AC=4;AF=0.083;AN=48;BaseQRankSum=9.895;DP=497;FS=11.910;HRun=4;HaplotypeScore=117.2700;InbreedingCoeff=-0.0886;MQ=53.40;MQ0=14;MQRankSum=-8.960;QD=7.24;ReadPosRankSum=3.226;VQSLOD=-0.0315;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	0/0:9,0:8:15.03:0,15,191	0/0:31,0:11:31.88:0,32,385	0/0:27,0:14:39.03:0,39,470	0/1:14,2:18:42.46:42,0,72	0/0:23,0:23:66.22:0,66,924	0/0:29,0:29:84.24:0,84,1122	0/0:17,0:11:27.09:0,27,378	0/0:22,0:22:63.21:0,63,882	0/0:23,0:21:60.15:0,60,801	0/0:18,0:15:36.08:0,36,482	0/0:18,0:18:45.15:0,45,629	0/0:23,0:23:69.22:0,69,948	0/0:18,0:18:54.18:0,54,755	0/0:12,0:10:30.10:0,30,419	0/0:16,0:13:33.11:0,33,458	0/0:28,0:28:81.24:0,81,1099	0/0:13,0:13:39.13:0,39,534	./.	0/1:20,4:26:30.25:154,0,30	./.	0/0:26,0:26:72.22:0,72,975	0/0:27,0:27:81.25:0,81,1101	0/0:25,0:25:69.23:0,69,965	0/0:13,0:11:30.09:0,30,406	0/1:5,4:10:23.62:149,0,24	0/1:4,7:11:30.62:253,0,31	./.
chr10	44895436	.	A	AGAAG	1012.52	PASS	AB=0.808;AC=3;AF=0.063;AN=48;BaseQRankSum=8.571;DP=495;FS=1.512;HRun=0;HaplotypeScore=144.6329;InbreedingCoeff=-0.0683;MQ=54.80;MQ0=12;MQRankSum=-7.066;QD=18.75;ReadPosRankSum=2.907;VQSLOD=3.6551;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	0/0:9,0:8:18.03:0,18,301	0/0:30,0:12:33.03:0,33,532	0/0:27,0:14:6.57:0,7,592	0/1:12,3:17:28.92:336,0,29	0/0:23,0:23:69.22:0,69,1407	0/0:30,0:30:87.25:0,87,1649	0/0:17,0:9:27.09:0,27,565	0/0:22,0:22:66.22:0,66,1325	0/0:23,0:21:63.16:0,63,1158	0/0:16,0:13:39.07:0,39,731	0/0:15,0:15:45.15:0,45,937	0/0:24,0:24:69.23:0,69,1384	0/0:19,0:19:57.18:0,57,1114	0/0:13,0:11:30.10:0,30,602	0/0:18,0:15:16.96:0,17,625	0/0:28,0:28:81.69:0,82,1613	0/0:14,0:14:39.13:0,39,770	./.	0/1:14,9:26:99:761,0,159	./.	0/0:27,0:27:75.24:0,75,1462	0/0:29,0:29:87.25:0,87,1666	0/0:23,0:23:69.24:0,69,1423	0/0:13,0:11:33.06:0,33,580	0/1:9,0:9:8.75:9,0,248	0/0:11,0:11:29.65:0,30,280	./.
chr10	44895449	.	AT	A	451.78	PASS	AC=8;AF=0.167;AN=48;BaseQRankSum=10.858;DP=466;FS=9.180;HRun=1;HaplotypeScore=111.5563;InbreedingCoeff=0.9499;MQ=57.94;MQ0=11;MQRankSum=-8.779;QD=8.86;ReadPosRankSum=1.979;VQSLOD=0.6621;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/0:7,0:6:11.93:0,12,110	0/0:29,0:10:28.64:0,29,399	0/0:28,1:16:28.22:0,28,434	1/1:8,3:13:12.54:64,13,0	0/0:26,0:26:72.20:0,72,1085	0/0:27,0:27:78.16:0,78,1163	0/0:14,0:4:11.98:0,12,102	0/0:23,0:23:66.19:0,66,1004	0/0:22,0:20:54.24:0,54,587	0/0:14,0:11:32.36:0,32,310	0/0:13,0:13:39.10:0,39,570	0/0:28,0:28:84.26:0,84,1293	0/0:22,0:22:66.20:0,66,1028	0/0:15,0:13:31.62:0,32,326	0/0:17,0:14:36.56:0,37,372	0/0:27,0:27:60.69:0,61,1184	0/0:15,0:15:9.41:0,9,327	./.	1/1:10,4:20:13.70:140,14,0	./.	0/0:24,0:24:72.25:0,72,1144	0/0:26,0:26:75.26:0,75,1196	0/0:23,0:23:69.21:0,69,1077	0/0:12,0:10:22.12:0,22,242	1/1:3,5:8:21.23:197,21,0	1/1:0,7:8:23.81:201,24,0	./.
chr10	44895452	.	AAC	A	86.80	PASS	AB=0.938;AC=6;AF=0.125;AN=48;BaseQRankSum=8.019;DP=469;FS=14.430;HRun=0;HaplotypeScore=122.3825;InbreedingCoeff=0.2490;MQ=58.03;MQ0=10;MQRankSum=-6.348;QD=1.07;ReadPosRankSum=0.906;VQSLOD=1.3930;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/0:7,0:6:9.03:0,9,144	0/0:29,0:10:24.01:0,24,376	0/1:31,0:16:5.08:5,0,452	0/1:14,0:13:25.30:25,0,48	0/0:26,0:26:75.23:0,75,1336	0/0:26,0:26:69.18:0,69,1291	0/0:15,0:5:15.04:0,15,226	0/0:21,0:21:63.22:0,63,1201	0/0:17,0:16:45.09:0,45,666	0/0:14,0:11:33.11:0,33,529	0/0:14,0:14:39.12:0,39,706	0/0:30,0:30:90.29:0,90,1672	0/0:22,0:22:66.23:0,66,1273	0/0:19,0:17:48.02:0,48,711	0/0:17,0:14:41.72:0,42,618	0/0:28,0:28:81.23:0,81,1495	0/0:15,0:15:38.55:0,39,660	./.	0/1:18,3:20:52.26:52,0,87	./.	0/0:26,0:26:78.25:0,78,1452	0/0:25,0:25:75.26:0,75,1443	0/0:23,0:23:69.22:0,69,1283	0/0:13,0:11:30.10:0,30,459	0/1:6,1:7:8.91:9,0,102	1/1:2,6:8:16.79:114,17,0	./.
chr10	44895453	.	A	AGAAG	871.67	PASS	AB=0.902;AC=5;AF=0.104;AN=48;BaseQRankSum=10.228;DP=466;FS=8.393;HRun=0;HaplotypeScore=138.2030;InbreedingCoeff=0.2782;MQ=58.12;MQ0=10;MQRankSum=-8.497;QD=17.43;ReadPosRankSum=3.367;VQSLOD=2.4483;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/0:7,0:6:9.03:0,9,149	0/0:29,0:9:24.02:0,24,390	0/0:30,0:15:9.81:0,10,499	0/1:12,2:13:35.07:277,0,35	0/0:26,0:26:75.18:0,75,1344	0/0:24,0:24:69.18:0,69,1368	0/0:13,0:5:15.02:0,15,140	0/0:21,0:21:63.20:0,63,1268	0/0:16,0:15:45.10:0,45,625	0/0:14,0:11:33.10:0,33,548	0/0:13,0:13:39.11:0,39,732	0/0:30,0:30:90.27:0,90,1732	0/0:22,0:22:66.23:0,66,1349	0/0:19,0:17:48.05:0,48,656	0/0:17,0:14:0.10:0,0,563	0/0:28,0:28:84.22:0,84,1610	0/0:15,0:15:29.03:0,29,676	./.	0/1:20,1:20:22.16:367,0,22	./.	0/0:26,0:26:78.25:0,78,1538	0/0:26,0:26:75.26:0,75,1532	0/0:23,0:23:69.21:0,69,1364	0/0:14,0:12:20.49:0,20,413	0/1:6,1:7:11.70:112,0,12	1/1:7,1:8:20.64:234,21,0	./.
chr10	44895457	.	A	AGGC	205.05	PASS	AB=0.875;AC=3;AF=0.063;AN=48;BaseQRankSum=4.577;DP=466;FS=2.817;HRun=0;HaplotypeScore=130.3509;InbreedingCoeff=0.5970;MQ=56.94;MQ0=10;MQRankSum=-3.167;QD=13.67;ReadPosRankSum=0.323;VQSLOD=3.0746;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/0:7,0:6:9.03:0,9,158	0/0:27,0:7:21.06:0,21,346	0/0:33,0:14:27.41:0,27,417	0/0:13,1:13:23.97:0,24,306	0/0:25,0:25:72.22:0,72,1281	0/0:24,0:24:72.14:0,72,1207	0/0:13,0:6:18.05:0,18,308	0/0:20,0:20:57.20:0,57,1062	0/0:16,0:15:42.14:0,42,746	0/0:13,0:10:30.10:0,30,555	0/0:14,0:14:42.14:0,42,749	0/0:29,0:29:84.26:0,84,1502	0/0:23,0:23:69.20:0,69,1190	0/0:18,0:16:45.15:0,45,835	0/0:18,0:15:43.31:0,43,708	0/0:27,0:27:78.25:0,78,1412	0/0:17,0:17:46.87:0,47,736	./.	0/0:22,1:21:32.49:0,32,449	./.	0/0:25,0:25:75.25:0,75,1368	0/0:28,0:28:78.23:0,78,1328	0/0:23,0:23:69.24:0,69,1253	0/0:13,0:11:30.10:0,30,528	0/1:6,1:7:57.04:57,0,187	1/1:7,1:8:15.05:248,15,0	./.
chr10	44895464	.	A	AG	407.09	PASS	AB=0.843;AC=3;AF=0.058;AN=52;BaseQRankSum=7.221;DP=480;FS=7.348;HRun=0;HaplotypeScore=108.5955;InbreedingCoeff=-0.0754;MQ=58.37;MQ0=11;MQRankSum=-5.345;QD=9.93;ReadPosRankSum=0.132;VQSLOD=3.7678;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:2,0:2:2.97:0,3,20	0/0:7,0:6:12.02:0,12,147	0/0:25,0:8:8.97:0,9,198	0/0:33,0:14:16.35:0,16,293	0/1:11,4:14:90.52:91,0,107	0/0:25,0:25:72.22:0,72,989	0/0:22,0:22:66.18:0,66,901	0/0:17,0:12:36.12:0,36,490	0/0:23,0:23:69.18:0,69,885	0/0:19,0:18:54.15:0,54,698	0/0:14,0:11:30.05:0,30,382	0/0:20,0:20:57.18:0,57,778	0/0:30,0:30:90.30:0,90,1258	0/0:21,0:21:63.19:0,63,848	0/0:18,0:16:45.12:0,45,608	0/0:17,0:14:13.93:0,14,481	0/0:28,0:28:81.25:0,81,1094	0/0:16,0:16:47.79:0,48,619	0/0:7,0:3:5.99:0,6,51	0/1:13,7:18:99:308,0,180	./.	0/0:24,0:24:72.23:0,72,991	0/0:28,0:28:84.24:0,84,1110	0/0:24,0:24:72.23:0,72,990	0/0:13,0:11:33.02:0,33,417	0/0:6,0:6:12.15:0,12,94	0/1:6,0:6:30.24:107,0,30	./.
chr10	44895476	.	GAT	G	343.34	PASS	AB=0.772;AC=4;AF=0.077;AN=52;BaseQRankSum=6.679;DP=499;FS=3.388;HRun=0;HaplotypeScore=112.5191;InbreedingCoeff=0.3028;MQ=57.95;MQ0=11;MQRankSum=-5.969;QD=10.10;ReadPosRankSum=-1.575;VQSLOD=2.7801;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:2,0:2:3.01:0,3,30	0/0:6,0:5:9.03:0,9,128	0/0:25,0:12:35.43:0,35,540	0/0:31,0:16:44.68:0,45,787	0/1:8,3:12:87.15:99,0,87	0/0:23,0:23:66.23:0,66,1274	0/0:23,0:23:69.24:0,69,1298	0/0:21,0:17:51.17:0,51,982	0/0:28,0:28:84.27:0,84,1577	0/0:19,0:18:54.19:0,54,1039	0/0:16,0:13:9.34:0,9,545	0/0:24,0:24:72.25:0,72,1387	0/0:31,0:31:93.32:0,93,1789	0/0:19,0:19:57.20:0,57,1100	0/0:17,0:15:39.13:0,39,752	0/0:17,0:14:39.12:0,39,692	0/0:28,0:28:84.29:0,84,1570	0/0:20,0:20:51.06:0,51,847	0/0:8,1:3:1.41:0,1,4	0/1:10,7:17:99:318,0,101	./.	0/0:26,0:25:75.26:0,75,1406	0/0:31,0:31:90.27:0,90,1700	0/0:27,0:27:81.26:0,81,1520	0/0:17,0:15:41.96:0,42,711	0/0:4,0:5:10.80:0,11,138	1/1:2,0:2:4.81:28,5,0	./.
chr10	44895560	.	AAGC	A	96.02	PASS	AB=0.909;AC=7;AF=0.135;AN=52;BaseQRankSum=6.525;DP=476;FS=6.568;HRun=0;HaplotypeScore=107.3349;InbreedingCoeff=0.4274;MQ=63.76;MQ0=1;MQRankSum=-4.974;QD=3.31;ReadPosRankSum=-3.322;VQSLOD=0.7492;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:12,0:12:33.11:0,33,723	0/0:22,0:22:52.86:0,53,898	0/0:21,0:16:38.10:0,38,768	0/1:5,3:8:0.42:77,0,0	0/0:19,0:19:57.15:0,57,1194	0/0:20,0:20:57.18:0,57,1268	0/0:24,0:24:34.46:0,34,1165	0/0:33,0:33:90.31:0,90,1959	0/0:28,0:28:81.27:0,81,1750	0/0:19,0:19:51.18:0,51,1144	0/0:26,0:26:69.22:0,69,1471	0/0:25,0:25:72.23:0,72,1568	0/0:14,0:14:42.12:0,42,922	0/0:23,0:23:69.18:0,69,1536	0/0:13,0:13:35.90:0,36,704	0/0:19,0:19:57.16:0,57,1158	0/0:16,0:16:45.15:0,45,1009	0/1:14,0:7:26.69:27,0,201	0/1:5,0:5:42.95:43,0,44	1/1:0,1:1:3.01:48,3,0	0/0:29,0:29:84.29:0,84,1883	0/0:28,0:28:81.26:0,81,1688	0/0:33,0:32:66.35:0,66,1722	0/0:21,0:21:50.69:0,51,1298	0/0:1,0:1:3.01:0,3,56	1/1:1,0:1:2.98:21,3,0	./.
chr10	44895566	.	AAGC	A	123.87	PASS	AB=0.892;AC=6;AF=0.125;AN=48;BaseQRankSum=5.778;DP=481;FS=1.005;HRun=0;HaplotypeScore=106.5495;InbreedingCoeff=0.4654;MQ=60.31;MQ0=3;MQRankSum=-5.576;QD=2.21;ReadPosRankSum=-1.992;VQSLOD=1.9758;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:13,0:13:33.11:0,33,732	0/0:19,0:18:42.07:0,42,579	0/0:23,0:19:51.14:0,51,906	1/1:6,0:6:8.29:37,8,0	0/0:21,0:21:63.21:0,63,1322	0/0:20,0:20:60.21:0,60,1335	0/1:21,8:29:99:162,0,1198	0/0:30,0:30:84.27:0,84,1791	0/0:28,0:28:81.28:0,81,1749	0/0:21,0:21:57.19:0,57,1247	0/0:23,0:23:66.23:0,66,1442	0/0:24,0:24:69.22:0,69,1502	0/0:14,0:14:42.14:0,42,940	0/0:24,0:24:72.15:0,72,1492	0/0:13,0:12:33.11:0,33,673	0/0:20,0:20:59.53:0,60,1127	0/0:15,0:15:42.14:0,42,966	0/1:20,0:7:8.70:9,0,196	0/0:3,0:3:3.01:0,3,51	1/1:1,0:1:3:29,3,0	0/0:29,0:29:84.27:0,84,1804	0/0:29,0:29:75.24:0,75,1577	0/0:34,0:33:56.82:0,57,1772	0/0:20,1:21:13.04:0,13,1195	./.	./.	./.
chr10	44895573	.	A	ATCAG	100.83	PASS	AB=0.957;AC=5;AF=0.104;AN=48;BaseQRankSum=3.927;DP=484;FS=6.643;HRun=0;HaplotypeScore=127.5396;InbreedingCoeff=0.6721;MQ=58.40;MQ0=6;MQRankSum=-3.790;QD=3.73;ReadPosRankSum=0.199;VQSLOD=1.9922;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:12,0:12:33.11:0,33,692	0/0:14,0:13:33.04:0,33,608	0/0:23,0:19:51.17:0,51,989	1/1:1,3:4:9.01:145,9,0	0/0:25,0:25:75.24:0,75,1485	0/0:23,0:23:66.22:0,66,1341	0/0:34,0:34:99:0,99,1794	0/0:32,0:32:93.28:0,93,1787	0/0:29,0:28:81.24:0,81,1637	0/0:25,0:25:72.07:0,72,1316	0/0:23,0:23:69.18:0,69,1288	0/0:25,0:25:75.24:0,75,1514	0/0:15,0:15:45.15:0,45,944	0/0:23,0:23:69.18:0,69,1345	0/0:14,0:13:39.04:0,39,670	0/0:18,0:19:55.99:0,56,1099	0/0:14,0:14:42.13:0,42,821	0/1:21,0:6:0.67:1,0,200	0/0:1,0:1:3.01:0,3,58	1/1:0,1:1:3.01:54,3,0	0/0:27,0:27:81.26:0,81,1652	0/0:25,0:25:75.25:0,75,1534	0/0:33,0:33:76.68:0,77,1750	0/0:20,0:20:60.11:0,60,1129	./.	./.	./.
chr10	44895614	.	A	AAGG	948.73	PASS	AB=0.946;AC=9;AF=0.196;AN=46;BaseQRankSum=8.175;DP=421;FS=2.981;HRun=0;HaplotypeScore=149.0602;InbreedingCoeff=-0.0264;MQ=63.75;MQ0=1;MQRankSum=-8.566;QD=6.24;ReadPosRankSum=-6.278;VQSLOD=0.7774;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	./.	0/1:8,0:8:26.34:26,0,191	0/0:15,0:13:30.07:0,30,433	0/0:14,0:14:15.25:0,15,320	0/0:2,0:2:5.99:0,6,57	0/0:22,0:22:66.23:0,66,1110	0/0:22,0:22:57.15:0,57,932	0/1:21,0:21:99:127,0,755	0/0:28,0:28:84.24:0,84,1366	0/1:26,2:27:99:153,0,788	0/1:25,3:28:99:286,0,622	0/0:18,0:18:51.17:0,51,864	0/0:22,0:22:63.22:0,63,1066	0/0:17,0:17:48.16:0,48,811	0/1:25,2:26:99:110,0,603	0/1:13,1:13:69.23:69,0,191	0/0:24,0:24:69.22:0,69,1150	0/0:6,0:6:18.01:0,18,262	1/1:3,0:2:4.74:16,5,0	./.	0/0:1,0:1:1.55:0,2,4	0/0:17,0:17:51.17:0,51,865	0/0:33,0:33:96.33:0,96,1622	0/0:28,0:27:72.18:0,72,1189	0/1:21,2:22:99:291,0,425	./.	./.	./.
chr10	44895633	.	GC	G	2035.61	PASS	AB=0.713;AC=14;AF=0.269;AN=52;BaseQRankSum=11.777;DP=444;FS=13.438;HRun=1;HaplotypeScore=130.1303;InbreedingCoeff=0.1183;MQ=63.41;MQ0=1;MQRankSum=-10.209;QD=12.26;ReadPosRankSum=0.936;VQSLOD=1.2306;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,2:3:9.02:108,9,0	1/1:6,5:11:24.01:228,24,0	0/0:17,0:13:38.46:0,38,512	0/0:20,0:18:51.62:0,52,750	0/1:4,1:5:16.99:17,0,25	0/0:25,0:25:72.21:0,72,1103	0/0:18,0:18:54.18:0,54,858	0/1:13,7:20:99:171,0,521	0/0:32,0:32:96.33:0,96,1524	0/1:10,19:28:99:468,0,281	0/1:8,16:24:99:337,0,234	0/0:20,0:20:60.18:0,60,929	0/0:22,0:22:60.20:0,60,952	0/0:15,0:15:45.15:0,45,719	0/1:14,16:29:99:372,0,343	0/1:7,11:17:99:198,0,251	0/0:23,0:23:69.21:0,69,1076	0/1:3,0:3:8.87:48,0,9	0/0:3,0:2:5.94:0,6,42	0/0:2,0:2:2.13:0,2,4	1/1:1,1:2:0.41:6,0,0	0/0:15,0:15:45.05:0,45,663	0/0:36,0:36:99:0,108,1700	0/0:29,0:29:81.27:0,81,1274	0/1:10,11:21:99:237,0,158	0/0:1,0:1:2.96:0,3,19	./.	./.
chr10	44895637	.	G	GAAA	3511.99	PASS	AB=0.808;AC=16;AF=0.308;AN=52;BaseQRankSum=11.814;DP=435;FS=6.558;HRun=2;HaplotypeScore=145.1055;InbreedingCoeff=0.2139;MQ=62.37;MQ0=1;MQRankSum=-12.152;QD=21.95;ReadPosRankSum=1.053;VQSLOD=0.7869;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,0:3:0.39:19,0,0	1/1:7,4:11:20.94:328,21,0	0/0:14,0:10:27.98:0,28,447	0/0:21,0:19:57.05:0,57,875	0/1:6,0:6:0.66:1,0,3	0/0:23,0:23:66.19:0,66,1086	0/0:20,0:20:54.11:0,54,889	0/1:17,0:17:99:105,0,632	0/0:33,0:33:99:0,99,1700	0/1:18,10:27:99:789,0,208	0/1:12,11:23:99:598,0,173	0/0:21,0:21:63.20:0,63,1067	0/0:21,0:21:63.18:0,63,1041	0/0:16,0:16:48.15:0,48,818	0/1:16,13:28:99:720,0,317	0/1:8,10:17:99:485,0,212	0/0:22,0:22:63.22:0,63,1109	1/1:2,0:2:4.17:20,4,0	0/0:2,0:1:3:0,3,28	0/0:3,0:3:2.13:0,2,4	1/1:2,0:2:1.25:13,1,0	0/0:13,0:13:36.11:0,36,584	0/0:35,0:35:99:0,105,1833	0/0:31,0:31:88.72:0,89,1461	0/1:12,8:20:92.16:433,0,92	0/1:1,0:1:0:0,0,0	./.	./.
chr10	44895643	.	A	AAGCAAG	4834.31	PASS	AB=1.000;AC=12;AF=0.231;AN=52;BaseQRankSum=10.263;DP=430;FS=13.667;HRun=0;HaplotypeScore=173.8283;InbreedingCoeff=0.6650;MQ=62.52;MQ0=1;MQRankSum=-11.021;QD=37.77;ReadPosRankSum=2.110;VQSLOD=4.1439;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:5:8.92:0,9,62	0/1:11,0:11:17.72:18,0,72	0/0:16,0:13:35.71:0,36,627	0/0:21,0:19:49.89:0,50,1020	0/0:6,0:6:9.63:0,10,87	0/0:19,0:19:54.17:0,54,1190	0/0:22,0:22:57.20:0,57,1203	0/0:14,0:14:39.09:0,39,801	0/0:29,0:29:84.29:0,84,1958	1/1:17,7:24:30.89:982,31,0	1/1:16,5:21:35.51:803,36,0	0/0:21,0:21:63.22:0,63,1442	0/0:23,0:23:66.22:0,66,1417	0/0:15,0:15:42.14:0,42,959	1/1:19,10:28:26.19:1250,26,0	1/1:15,4:18:31.90:848,32,0	0/0:23,0:23:57.15:0,57,1279	0/1:5,0:5:31.35:31,0,79	0/0:2,0:1:3.01:0,3,37	0/0:3,0:3:5.88:0,6,36	0/0:2,0:2:4.81:0,5,28	0/0:13,0:13:36.12:0,36,734	0/0:32,0:32:96.33:0,96,2170	0/0:33,0:33:94.96:0,95,2033	1/1:12,7:19:29.61:902,30,0	0/0:2,0:2:2.97:0,3,20	./.	./.
chr10	44895644	.	AGCAGAAGCAGAG	A	382.72	PASS	AB=0.912;AC=4;AF=0.077;AN=52;BaseQRankSum=4.040;DP=430;FS=11.570;HRun=0;HaplotypeScore=242.2659;InbreedingCoeff=0.0292;MQ=63.68;MQ0=1;MQRankSum=-4.807;QD=15.95;ReadPosRankSum=-1.376;VQSLOD=0.8102;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:5,0:5:34.33:34,0,37	0/1:5,6:11:53.04:412,0,53	0/0:18,0:14:32.70:0,33,1121	0/0:22,0:20:54.07:0,54,1689	0/1:6,0:6:11.38:11,0,24	0/0:19,0:19:54.19:0,54,2445	0/0:22,0:22:60.21:0,60,2271	0/0:14,0:14:39.13:0,39,1068	0/0:29,0:29:84.29:0,84,4384	0/0:24,0:24:54.14:0,54,739	0/0:21,0:21:45.12:0,45,571	0/0:21,0:21:63.22:0,63,3167	0/0:23,0:23:66.23:0,66,3083	0/0:14,0:14:42.13:0,42,2117	0/0:30,0:29:71.82:0,72,966	0/0:19,0:18:48.11:0,48,605	0/0:20,0:20:60.02:0,60,2891	0/0:5,0:5:14.85:0,15,103	0/0:1,0:1:3.01:0,3,41	0/0:3,0:3:2.78:0,3,32	0/1:2,0:2:3.05:30,0,3	0/0:13,0:13:33.11:0,33,1432	0/0:32,0:32:90.31:0,90,4667	0/0:33,0:33:90.27:0,90,4036	0/0:20,0:20:50.70:0,51,573	0/0:2,0:2:2.97:0,3,20	./.	./.
chr10	44895650	.	AGCAGAG	A	4859.63	PASS	AB=0.861;AC=23;AF=0.442;AN=52;BaseQRankSum=11.741;DP=454;FS=28.815;HRun=0;HaplotypeScore=178.5750;InbreedingCoeff=0.5213;MQ=66.31;MQ0=1;MQRankSum=-12.555;QD=27.46;ReadPosRankSum=0.078;VQSLOD=2.6740;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,0:6:8.33:44,8,0	0/1:11,0:11:70.60:130,0,71	0/0:20,0:16:35.12:0,35,797	0/0:24,0:22:53.22:0,53,1252	1/1:6,0:6:12.71:65,13,0	0/0:20,0:20:57.14:0,57,1569	0/0:22,0:22:57.11:0,57,1524	0/1:16,0:16:16.91:17,0,707	0/0:28,0:28:84.27:0,84,2861	1/1:16,9:25:30.31:900,30,0	0/1:13,7:20:61.37:651,0,61	0/0:22,0:22:66.22:0,66,2112	0/0:24,0:24:72.22:0,72,2185	0/0:18,0:18:51.12:0,51,1389	1/1:24,10:33:87.17:1311,87,0	0/1:12,7:18:13.13:646,0,13	0/0:21,0:21:41.14:0,41,1865	0/1:4,1:5:54.19:54,0,62	1/1:3,0:2:5.47:30,5,0	1/1:5,0:5:8.15:43,8,0	1/1:2,0:2:5.23:43,5,0	0/0:12,0:12:33.10:0,33,959	0/0:31,0:31:93.31:0,93,3102	0/0:35,0:35:70.55:0,71,2675	1/1:14,9:23:26.63:923,27,0	1/1:2,0:2:1.25:3,1,0	./.	./.
chr10	44895662	.	A	AG	290.53	PASS	AB=0.701;AC=6;AF=0.115;AN=52;BaseQRankSum=6.637;DP=452;FS=8.420;HRun=0;HaplotypeScore=138.5799;InbreedingCoeff=0.5453;MQ=65.51;MQ0=1;MQRankSum=-5.348;QD=15.29;ReadPosRankSum=-2.239;VQSLOD=4.9523;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:5,1:6:0.61:1,0,137	0/0:10,0:10:20.85:0,21,193	0/0:21,0:17:50.90:0,51,675	0/0:24,0:22:42.47:0,42,665	0/1:1,5:6:18.38:154,0,18	0/0:17,0:17:51.15:0,51,680	0/0:22,0:22:60.15:0,60,800	0/0:19,0:19:54.07:0,54,714	0/0:28,0:28:84.27:0,84,1146	0/0:24,0:24:66.13:0,66,726	0/0:15,0:15:41.48:0,41,415	0/0:20,0:20:60.19:0,60,824	0/0:27,0:27:81.21:0,81,1079	0/0:17,0:17:51.17:0,51,713	0/0:31,0:30:75.30:0,75,931	0/0:14,0:14:35.53:0,36,376	0/0:20,0:20:60.19:0,60,820	0/0:6,0:6:18.01:0,18,218	0/0:4,0:4:9.03:0,9,122	1/1:0,5:5:15.05:206,15,0	0/0:3,0:3:5:0,5,26	0/0:13,0:13:39.11:0,39,501	0/0:35,0:35:99:0,105,1353	0/0:35,1:36:84.10:0,84,1282	0/0:27,0:27:52.47:0,52,762	1/1:0,2:2:3.01:44,3,0	./.	./.
chr10	44895671	.	GCCGAA	G	541.28	PASS	AB=0.851;AC=8;AF=0.154;AN=52;BaseQRankSum=6.072;DP=480;FS=10.539;HRun=0;HaplotypeScore=177.8612;InbreedingCoeff=0.3341;MQ=67.99;MQ0=0;MQRankSum=-5.430;QD=20.05;ReadPosRankSum=2.520;VQSLOD=2.9107;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:5,1:6:19.74:20,0,268	0/0:10,0:10:24.08:0,24,716	0/0:28,0:25:74.74:0,75,2112	0/0:23,0:23:69.23:0,69,1897	0/1:1,5:6:17.25:239,0,17	0/0:17,0:17:48.16:0,48,1571	0/0:23,0:23:69.19:0,69,2193	0/0:21,0:21:63.17:0,63,1920	0/0:23,0:23:69.24:0,69,2209	0/0:36,0:36:99:0,105,3104	0/0:17,0:17:45.15:0,45,1319	0/0:20,0:20:60.21:0,60,1928	0/0:26,0:26:78.25:0,78,2478	0/0:17,0:17:51.15:0,51,1538	0/0:34,0:33:87.30:0,87,2691	0/0:14,0:14:39.13:0,39,1292	0/0:19,0:19:54.19:0,54,1686	0/0:6,0:6:18.06:0,18,504	0/1:6,0:6:30.21:30,0,290	1/1:0,5:5:15.05:298,15,0	0/1:2,0:2:23.74:24,0,59	0/0:20,0:20:60.21:0,60,1883	0/0:36,0:36:99:0,108,3281	0/0:34,0:34:93.92:0,94,2794	0/0:29,0:29:84.29:0,84,2587	1/1:0,2:2:3.01:65,3,0	./.	./.
chr10	44895688	.	GGA	G	695.88	PASS	AB=0.852;AC=9;AF=0.173;AN=52;BaseQRankSum=7.955;DP=492;FS=10.360;HRun=0;HaplotypeScore=136.2982;InbreedingCoeff=0.3688;MQ=63.57;MQ0=2;MQRankSum=-6.640;QD=16.57;ReadPosRankSum=2.710;VQSLOD=3.5888;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:5,1:6:75.87:77,0,76	0/0:11,0:11:27.01:0,27,503	0/0:25,0:21:50.09:0,50,970	0/0:27,0:25:72.22:0,72,1375	1/1:0,9:9:21.07:339,21,0	0/0:17,0:17:48.16:0,48,975	0/0:24,0:24:72.25:0,72,1436	0/0:23,0:22:66.23:0,66,1335	0/0:21,0:21:63.22:0,63,1276	0/0:36,1:37:99:0,111,2156	0/0:16,0:16:42.14:0,42,850	0/0:20,0:20:60.21:0,60,1210	0/0:26,0:26:78.27:0,78,1567	0/0:18,0:18:54.16:0,54,1025	0/0:30,0:30:84.25:0,84,1652	0/0:17,0:17:48.16:0,48,931	0/0:19,0:19:29.29:0,29,1000	0/1:9,0:9:99:107,0,191	0/1:5,1:6:33.32:33,0,125	0/1:1,5:6:1.88:225,0,2	0/1:4,0:4:1.88:2,0,66	0/0:23,0:23:69.24:0,69,1383	0/0:32,0:32:96.32:0,96,1859	0/0:32,0:32:89.78:0,90,1619	0/0:31,0:31:90.30:0,90,1763	1/1:0,2:2:3.01:49,3,0	./.	./.
chr10	44895689	.	GAA	G	444.66	PASS	AB=0.933;AC=8;AF=0.148;AN=54;BaseQRankSum=7.734;DP=502;FS=10.183;HRun=3;HaplotypeScore=135.5909;InbreedingCoeff=0.3002;MQ=63.24;MQ0=2;MQRankSum=-6.529;QD=10.59;ReadPosRankSum=2.539;VQSLOD=-0.1511;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:6,0:6:28.40:28,0,130	0/0:11,0:11:24.08:0,24,463	0/0:26,0:21:49.16:0,49,856	0/0:27,0:25:72.24:0,72,1298	1/1:10,0:10:18.37:220,18,0	0/0:17,0:17:48.16:0,48,927	0/0:24,0:24:72.23:0,72,1357	0/0:24,0:23:69.23:0,69,1271	0/0:21,0:21:63.22:0,63,1199	0/0:38,0:38:99:0,114,2078	0/0:15,0:15:45.15:0,45,848	0/0:20,0:20:60.21:0,60,1139	0/0:26,0:26:78.27:0,78,1506	0/0:17,0:17:48.16:0,48,927	0/0:31,0:31:87.30:0,87,1639	0/0:17,0:17:48.12:0,48,885	0/0:19,1:20:14.36:0,14,986	0/1:7,4:11:99:163,0,247	0/1:6,0:6:12.36:12,0,209	0/1:6,0:6:17.96:129,0,18	0/0:4,0:4:8.39:0,8,120	0/0:24,0:24:72.24:0,72,1338	0/0:33,0:33:96.25:0,96,1721	0/0:32,0:32:86.91:0,87,1482	0/0:32,0:32:93.27:0,93,1685	1/1:3,0:3:2.39:27,2,0	0/0:1,0:1:3.01:0,3,41	./.
chr10	44895731	.	AAAAG	A	717.01	PASS	AB=0.793;AC=5;AF=0.093;AN=54;BaseQRankSum=5.899;DP=551;FS=45.941;HRun=0;HaplotypeScore=186.5225;InbreedingCoeff=-0.1145;MQ=56.84;MQ0=7;MQRankSum=-5.459;QD=12.36;ReadPosRankSum=0.143;VQSLOD=1.6308;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:3,2:5:82.15:101,0,82	0/0:17,0:17:39.13:0,39,862	0/0:15,0:8:14.60:0,15,377	0/0:25,0:20:44.61:0,45,780	0/0:17,0:15:4.77:0,5,653	0/0:15,0:15:45.15:0,45,1231	0/0:21,0:21:57.19:0,57,1405	0/0:23,0:23:69.19:0,69,1553	0/0:20,0:20:57.18:0,57,1483	0/0:36,0:36:93.32:0,93,2334	0/0:19,0:19:51.15:0,51,1267	0/0:20,0:20:57.19:0,57,1462	0/0:24,0:24:63.22:0,63,1656	0/0:15,0:15:45.15:0,45,1177	0/0:37,0:37:99:0,102,2442	0/0:19,0:19:51.18:0,51,1270	0/0:22,0:22:62.25:0,62,1635	0/0:14,0:15:40.92:0,41,793	0/0:23,0:13:4.48:0,4,792	0/1:12,3:14:97.78:98,0,369	0/1:9,0:10:32.81:33,0,344	0/0:26,0:25:75.25:0,75,1957	0/0:25,0:25:75.26:0,75,1989	0/0:31,0:31:86.83:0,87,2143	0/0:28,0:28:78.20:0,78,1758	0/1:12,5:17:99:257,0,628	0/1:5,6:11:99:345,0,144	./.
chr10	44895742	.	C	CA	4331.60	PASS	AB=0.931;AC=18;AF=0.333;AN=54;BaseQRankSum=5.973;DP=553;FS=14.181;HRun=9;HaplotypeScore=133.8100;InbreedingCoeff=0.6049;MQ=59.75;MQ0=2;MQRankSum=-0.026;QD=16.72;ReadPosRankSum=-1.168;VQSLOD=3.4181;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:6:8.15:0,8,24	0/0:0,0:15:13.54:0,14,63	0/0:19,0:13:6.62:0,7,195	0/0:17,0:14:0.40:0,0,68	0/0:4,0:12:7.26:0,7,32	0/0:16,0:17:35:0,35,292	0/0:19,0:20:49.05:0,49,402	1/1:10,0:25:37.06:254,37,0	0/0:21,0:21:56.97:0,57,495	1/1:5,28:35:84:888,84,0	1/1:1,24:27:68.03:663,68,0	0/0:18,0:18:50.99:0,51,443	0/0:20,0:20:50.98:0,51,443	0/0:15,0:15:26.97:0,27,234	1/1:7,34:41:84.23:928,84,0	1/1:2,19:21:48.13:531,48,0	1/1:7,1:24:41.37:304,41,0	0/1:8,5:13:7.69:155,0,8	0/0:8,0:12:13.16:0,13,55	0/1:5,0:15:22.34:22,0,26	0/0:3,0:11:0.37:0,0,22	0/0:32,0:31:83.92:0,84,718	0/0:25,0:26:71:0,71,601	0/0:28,0:28:73.54:0,74,629	1/1:6,21:27:51.14:564,51,0	0/1:3,0:16:1.07:1,0,37	0/1:3,0:13:16.86:21,0,17	./.
chr10	44895743	.	A	AG	506.60	PASS	AB=0.964;AC=13;AF=0.241;AN=54;BaseQRankSum=7.078;DP=552;FS=21.079;HRun=0;HaplotypeScore=140.9355;InbreedingCoeff=-0.1787;MQ=59.87;MQ0=1;MQRankSum=0.237;QD=2.09;ReadPosRankSum=3.375;VQSLOD=1.5721;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:7:9.41:0,9,40	0/0:16,0:16:25.82:0,26,204	0/0:19,0:14:5.68:0,6,316	0/0:18,0:14:29.23:0,29,270	0/1:13,1:12:22.33:22,0,109	0/0:17,0:17:51.05:0,51,610	0/0:20,0:20:50.79:0,51,707	0/0:25,0:25:59.35:0,59,324	0/0:21,0:21:63.19:0,63,838	0/1:33,0:33:62.46:62,0,66	0/1:28,0:28:15.81:61,0,16	0/0:18,0:18:54.17:0,54,737	0/0:21,0:21:57.18:0,57,764	0/0:15,0:15:45.02:0,45,527	0/1:40,0:40:82.10:142,0,82	1/1:21,0:21:0.52:75,1,0	0/0:25,0:24:56.34:0,56,309	0/1:11,0:11:49.46:49,0,51	0/1:13,0:10:13.21:13,0,112	0/1:16,0:15:22.50:23,0,109	0/1:10,1:11:0.03:0,0,88	0/0:32,0:31:90.28:0,90,1223	0/0:28,0:28:78.16:0,78,1029	0/0:28,0:28:67.03:0,67,1014	0/1:26,0:26:60.97:79,0,61	0/1:15,1:16:43:43,0,121	0/1:10,3:12:67.24:80,0,67	./.
chr10	44895745	.	A	AAGAAGC	1596.75	PASS	AB=0.947;AC=9;AF=0.167;AN=54;BaseQRankSum=5.996;DP=552;FS=27.521;HRun=0;HaplotypeScore=195.5298;InbreedingCoeff=0.0543;MQ=59.96;MQ0=1;MQRankSum=-8.756;QD=15.06;ReadPosRankSum=0.419;VQSLOD=1.4482;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:7,0:7:12.03:190,12,0	0/0:16,0:16:48.14:0,48,768	0/0:19,0:14:33.48:0,33,642	0/0:15,0:12:27.07:0,27,401	0/1:16,1:15:65.52:66,0,344	0/0:18,0:18:48.16:0,48,1038	0/0:20,0:20:55.33:0,55,1263	0/0:24,0:24:65.86:0,66,732	0/0:21,0:21:63.22:0,63,1502	0/0:33,0:33:93.20:0,93,1183	0/0:28,0:28:74.45:0,74,809	0/0:18,0:18:54.18:0,54,1272	0/0:21,0:21:60.20:0,60,1364	0/0:14,0:14:39.10:0,39,835	0/0:38,0:38:92.64:0,93,1103	0/0:21,0:21:54.12:0,54,631	0/0:26,0:25:67.09:0,67,796	0/1:11,0:11:19.43:19,0,238	0/1:13,0:10:99:124,0,153	0/1:16,0:16:99:234,0,203	0/1:12,1:13:99:140,0,209	0/0:32,0:31:93.32:0,93,2178	0/0:29,0:29:81.26:0,81,1833	0/0:29,0:29:84.23:0,84,1869	0/0:24,0:24:60.18:0,60,718	0/1:15,1:16:99:332,0,321	0/1:10,3:12:60.57:634,0,61	./.
chr10	44895848	.	CAAG	C	4831.35	PASS	AB=1.000;AC=17;AF=0.315;AN=54;BaseQRankSum=12.480;DP=522;FS=5.619;HRun=0;HaplotypeScore=128.2137;InbreedingCoeff=0.5676;MQ=64.54;MQ0=1;MQRankSum=-3.077;QD=28.09;ReadPosRankSum=2.741;VQSLOD=4.9093;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:9,0:9:9.28:25,0,9	0/0:12,0:12:30.10:0,30,648	0/0:21,0:21:13.71:0,14,905	0/0:19,0:17:39.11:0,39,741	0/0:8,0:8:1:0,1,77	0/0:23,0:23:69.24:0,69,1505	0/0:17,0:17:42.09:0,42,835	0/0:41,0:40:99:0,99,2049	0/0:17,0:17:48.16:0,48,1047	1/1:5,28:33:81.27:1248,81,0	1/1:3,16:19:39.11:592,39,0	0/0:19,0:19:45.14:0,45,925	0/0:27,0:27:78.27:0,78,1704	0/0:19,0:19:54.17:0,54,1122	1/1:2,25:27:61.45:928,61,0	1/1:6,12:18:45.15:696,45,0	0/0:34,0:35:99:0,102,2133	1/1:7,9:16:27:457,27,0	0/1:7,0:5:25.43:25,0,50	0/1:6,0:6:5.86:6,0,66	0/0:10,0:10:5.64:0,6,53	0/0:27,0:27:75.25:0,75,1602	0/0:31,0:31:83.94:0,84,1731	0/0:24,0:24:69.24:0,69,1477	1/1:6,16:22:52.06:785,52,0	0/1:11,0:11:46.07:64,0,46	0/1:4,0:4:3.65:4,0,36	./.
chr10	44895852	.	A	AAAC	456.32	PASS	AB=0.849;AC=7;AF=0.130;AN=54;BaseQRankSum=3.417;DP=508;FS=21.908;HRun=0;HaplotypeScore=145.2327;InbreedingCoeff=-0.1489;MQ=65.77;MQ0=1;MQRankSum=-4.967;QD=8.45;ReadPosRankSum=-2.541;VQSLOD=0.9914;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:9,1:10:99:119,0,111	0/0:11,0:11:33.10:0,33,554	0/0:21,0:21:53.97:0,54,871	0/0:20,0:19:45.13:0,45,684	0/1:4,2:6:36.09:36,0,75	0/0:23,0:23:69.24:0,69,1217	0/0:16,0:16:48.16:0,48,812	0/0:38,0:37:99:0,108,1868	0/0:18,0:18:51.16:0,51,871	0/0:32,0:32:61.89:0,62,557	0/0:18,0:18:41.48:0,41,314	0/0:16,0:16:48.15:0,48,806	0/0:26,0:26:78.27:0,78,1376	0/0:18,0:18:54.18:0,54,940	0/0:27,0:27:59.53:0,60,459	0/0:17,0:17:44.86:0,45,350	0/0:35,0:35:67.17:0,67,1680	0/0:15,0:15:37.04:0,37,280	0/1:12,0:9:88.37:88,0,168	0/1:3,1:4:40.54:41,0,66	0/1:8,1:9:56.63:78,0,57	0/0:26,0:26:78.25:0,78,1344	0/0:32,0:32:84.29:0,84,1457	0/0:24,0:24:69.24:0,69,1215	0/0:21,0:20:58.59:0,59,446	0/1:10,1:11:65.57:160,0,66	0/1:1,1:2:46.41:64,0,46	./.
chr10	44895888	.	AAAG	A	2940.35	PASS	AB=0.590;AC=12;AF=0.222;AN=54;BaseQRankSum=6.319;DP=560;FS=16.956;HRun=0;HaplotypeScore=127.9298;InbreedingCoeff=0.8550;MQ=56.22;MQ0=0;MQRankSum=-8.705;QD=33.04;ReadPosRankSum=1.341;VQSLOD=3.3738;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,18:18:36.12:662,36,0	0/0:11,0:11:33.11:0,33,777	0/0:20,0:18:50.85:0,51,1070	0/0:27,0:26:71.92:0,72,1422	1/1:5,10:15:33.04:531,33,0	0/0:19,0:19:57.20:0,57,1384	0/0:17,0:17:50.91:0,51,1128	0/0:29,0:29:75.26:0,75,1692	0/0:24,0:24:69.24:0,69,1636	0/0:31,0:31:90.11:0,90,1974	0/0:25,0:25:72.24:0,72,1563	0/0:15,0:15:45.15:0,45,1030	0/0:24,0:24:72.24:0,72,1671	0/0:13,0:13:39.12:0,39,912	0/0:32,0:32:84.29:0,84,1989	0/0:21,0:21:60.21:0,60,1408	0/0:29,0:29:82.86:0,83,1966	0/0:16,0:16:45.15:0,45,974	0/1:2,8:8:5.06:223,0,5	1/1:0,14:14:33.11:612,33,0	0/1:4,6:10:1.86:301,0,2	0/0:24,0:24:72.25:0,72,1694	0/0:41,0:41:99:0,120,2766	0/0:24,0:24:72.20:0,72,1602	0/0:29,0:28:84.18:0,84,1850	1/1:0,13:13:33.07:511,33,0	1/1:0,9:9:15.05:278,15,0	./.
chr10	44896000	.	GCAGAAGCAGAAAAGGTGAAGCAAGAAAA	G	1601.41	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.581;DP=659;FS=3.930;HRun=0;HaplotypeScore=478.6571;InbreedingCoeff=0.9593;MQ=54.12;MQ0=2;MQRankSum=0.823;QD=42.14;ReadPosRankSum=-4.986;VQSLOD=-0.6079;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:51.17:0,51,2026	0/0:7,0:7:18.06:0,18,1181	0/0:16,0:14:23.67:0,24,730	0/0:24,0:21:34.93:0,35,1102	0/0:22,0:22:45.15:0,45,2165	0/0:20,0:20:51.17:0,51,3870	0/0:21,0:20:51.17:0,51,2609	1/1:13,25:38:72.22:1696,72,0	0/0:32,0:32:72.71:0,73,4799	0/0:42,0:42:99:0,117,7517	0/0:32,0:32:72.25:0,72,4535	0/0:14,0:14:33.11:0,33,2207	0/0:35,0:35:90.31:0,90,5763	0/0:14,0:14:36.11:0,36,2076	0/0:26,0:26:69.23:0,69,3940	0/0:23,0:23:45.14:0,45,2471	0/0:24,0:24:66.23:0,66,3901	0/0:16,0:16:48.16:0,48,2979	0/0:15,0:15:30.10:0,30,1434	0/0:23,0:23:30.10:0,30,1549	0/0:24,0:24:47.98:0,48,2248	0/0:23,0:23:60.19:0,60,3895	0/0:28,0:28:63.20:0,63,4061	0/0:32,0:32:75.24:0,75,4664	0/0:35,0:35:99:0,99,6593	0/0:24,0:24:48.15:0,48,2579	0/0:23,0:23:54.18:0,54,2663	0/0:4,0:4:12.04:0,12,662
chr10	44896043	.	CAGA	C	2339.89	PASS	AB=0.636;AC=11;AF=0.196;AN=56;BaseQRankSum=5.876;DP=626;FS=1.061;HRun=0;HaplotypeScore=164.3781;InbreedingCoeff=0.4283;MQ=61.57;MQ0=2;MQRankSum=-10.000;QD=24.12;ReadPosRankSum=-2.309;VQSLOD=3.4353;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,12:14:27.18:548,27,0	0/0:9,0:9:27.07:0,27,536	0/0:23,0:21:57.18:0,57,1221	0/0:29,0:28:84.12:0,84,1632	0/1:8,7:15:60.22:322,0,60	0/0:31,0:31:60.31:0,60,1842	0/0:27,0:27:81.26:0,81,1780	0/0:35,0:35:63.22:0,63,1386	0/0:28,0:28:84.29:0,84,1887	0/0:41,0:41:99:0,120,2609	0/0:27,0:27:78.18:0,78,1603	0/0:17,0:17:51.17:0,51,1129	0/0:24,0:24:69.22:0,69,1534	0/0:14,0:14:42.14:0,42,951	0/0:27,0:27:78.22:0,78,1653	0/0:18,0:18:54.10:0,54,1160	0/0:24,0:24:65.01:0,65,1340	0/0:21,0:21:30.07:0,30,1226	0/1:3,8:8:40.60:291,0,41	0/1:6,15:21:41.88:323,0,42	0/1:7,6:13:6.97:309,0,7	0/0:31,0:31:90.29:0,90,1997	0/0:26,0:26:78.23:0,78,1617	0/0:37,0:37:99:0,108,2410	0/0:40,0:40:99:0,117,2531	1/1:2,6:8:23.98:333,24,0	0/1:6,7:13:99:273,0,109	1/1:0,2:2:6.02:102,6,0
chr10	44896056	.	GCA	G	94.09	PASS	AB=0.755;AC=3;AF=0.054;AN=56;BaseQRankSum=6.223;DP=603;FS=2.171;HRun=0;HaplotypeScore=157.7650;InbreedingCoeff=-0.0611;MQ=63.30;MQ0=2;MQRankSum=-4.720;QD=2.41;ReadPosRankSum=0.489;VQSLOD=2.8739;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:12,1:13:25.90:0,26,466	0/0:9,0:9:24.08:0,24,487	0/0:26,0:23:69.08:0,69,1210	0/0:30,0:29:72.64:0,73,1220	0/1:7,4:11:50.90:51,0,234	0/0:28,0:28:84.29:0,84,1655	0/0:27,0:27:81.26:0,81,1604	0/0:31,0:31:84.29:0,84,1665	0/0:26,0:26:78.24:0,78,1500	0/0:39,0:39:99:0,111,2187	0/0:23,0:23:66.23:0,66,1326	0/0:18,0:18:54.19:0,54,1094	0/0:25,0:25:72.23:0,72,1408	0/0:15,0:15:45.15:0,45,903	0/0:24,0:24:69.24:0,69,1400	0/0:20,0:20:57.20:0,57,1138	0/0:25,0:25:39.94:0,40,1283	0/0:21,0:21:60.20:0,60,1185	0/0:12,0:10:24.08:0,24,474	0/1:14,4:18:67.60:68,0,367	0/0:11,0:11:24.04:0,24,384	0/0:30,0:30:90.31:0,90,1817	0/0:26,0:26:78.27:0,78,1565	0/0:39,0:39:99:0,100,2237	0/0:37,0:37:91.03:0,91,1917	0/0:7,0:7:21.07:0,21,416	0/1:6,4:10:75.64:76,0,255	0/0:2,0:2:6.02:0,6,114
chr10	44896059	.	GAAGA	G	200.89	PASS	AB=0.775;AC=3;AF=0.054;AN=56;BaseQRankSum=5.755;DP=620;FS=1.023;HRun=0;HaplotypeScore=190.1656;InbreedingCoeff=-0.0611;MQ=62.90;MQ0=2;MQRankSum=-4.358;QD=4.67;ReadPosRankSum=0.136;VQSLOD=2.7053;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:12,1:13:19.71:0,20,579	0/0:8,0:8:24.08:0,24,648	0/0:25,0:23:23.37:0,23,1504	0/0:30,0:29:81.11:0,81,1789	0/1:7,4:11:82.13:82,0,167	0/0:27,0:27:80.62:0,81,2047	0/0:27,0:27:81.28:0,81,2208	0/0:33,0:32:84.29:0,84,2235	0/0:27,0:27:81.28:0,81,2167	0/0:41,0:41:99:0,111,2857	0/0:24,0:24:66.23:0,66,1767	0/0:19,0:19:57.20:0,57,1542	0/0:24,0:24:66.20:0,66,1656	0/0:15,0:15:45.15:0,45,1258	0/0:24,0:24:72.25:0,72,1953	0/0:20,0:20:60.21:0,60,1588	0/0:26,0:26:69.05:0,69,1664	0/0:22,0:22:63:0,63,1626	0/0:13,0:11:25.28:0,25,539	0/1:15,4:19:99:106,0,570	0/0:11,0:11:25.48:0,25,387	0/0:31,0:31:93.32:0,93,2557	0/0:27,0:27:78.27:0,78,2106	0/0:40,0:40:99:0,120,3187	0/0:36,0:36:99:0,105,2686	0/0:11,0:11:27.07:0,27,566	0/1:9,4:13:99:113,0,287	0/0:2,0:2:6.02:0,6,80
chr10	44896121	.	AAAG	A	1211.24	PASS	AB=0.969;AC=12;AF=0.214;AN=56;BaseQRankSum=11.420;DP=693;FS=26.447;HRun=0;HaplotypeScore=215.8545;InbreedingCoeff=-0.1167;MQ=64.64;MQ0=5;MQRankSum=-10.287;QD=4.94;ReadPosRankSum=-0.899;VQSLOD=0.7436;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:6,0:6:65.25:65,0,182	0/0:13,0:13:36.12:0,36,791	0/0:20,0:19:24.56:0,25,864	0/0:29,0:29:58.70:0,59,1216	0/1:28,0:28:99:116,0,747	0/0:26,0:26:72.25:0,72,1613	0/0:25,0:25:69.24:0,69,1562	0/0:41,0:41:99:0,108,2320	0/0:38,0:38:99:0,114,2545	0/1:47,3:50:99:370,0,1916	0/1:29,3:32:22.06:22,0,1682	0/0:21,0:21:60.21:0,60,1358	0/0:23,0:23:69.24:0,69,1524	0/0:13,0:13:36.12:0,36,816	0/0:23,0:23:31.38:0,31,1217	0/1:25,0:25:50.53:51,0,1309	0/0:27,0:27:81.28:0,81,1798	0/0:19,0:19:45.15:0,45,1000	0/0:34,0:25:3.06:0,3,996	0/1:21,0:21:99:166,0,550	0/1:5,1:6:1.93:2,0,62	0/0:29,0:29:84.29:0,84,1863	0/0:30,0:30:87.27:0,87,1830	0/0:37,0:37:99:0,102,2206	0/1:34,1:36:99:178,0,1578	0/1:17,0:17:99:148,0,393	0/1:23,0:23:99:214,0,922	1/1:1,0:1:3:26,3,0
chr10	44896152	.	A	AAAG	2274.41	PASS	AB=0.754;AC=9;AF=0.161;AN=56;BaseQRankSum=7.928;DP=643;FS=0.000;HRun=0;HaplotypeScore=223.5792;InbreedingCoeff=-0.0090;MQ=72.92;MQ0=1;MQRankSum=-9.000;QD=17.36;ReadPosRankSum=1.359;VQSLOD=2.9787;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:2,2:4:33.72:84,0,34	0/0:11,0:11:29.91:0,30,523	0/0:31,0:25:66.49:0,66,1052	0/0:36,0:36:99:0,108,1764	0/1:18,13:31:99:894,0,422	0/0:19,0:19:57.20:0,57,1061	0/0:27,0:27:78.24:0,78,1342	0/0:32,0:32:87.27:0,87,1495	0/0:35,0:35:99:0,105,1926	0/0:58,0:58:99:0,160,2770	0/0:27,0:26:69.39:0,69,1224	0/0:19,0:19:54.18:0,54,975	0/0:27,0:27:81.24:0,81,1405	0/0:19,0:19:57.18:0,57,1022	0/0:25,0:25:66.70:0,67,1158	0/0:30,0:30:90.27:0,90,1522	0/0:22,0:22:66.19:0,66,1152	0/0:12,0:14:28.52:0,29,539	0/1:5,0:7:8.72:9,0,202	0/1:8,5:13:99:357,0,245	0/0:2,0:2:2.97:0,3,20	0/0:24,0:24:72.23:0,72,1292	0/0:23,0:23:66.21:0,66,1187	0/0:31,0:31:87.30:0,87,1611	0/1:35,1:37:16.89:17,0,1560	0/1:10,7:17:99:428,0,365	0/1:14,7:21:99:601,0,225	1/1:1,0:1:2.98:21,3,0
chr10	44896159	.	CGGAAGA	C	3916.80	PASS	AB=0.864;AC=10;AF=0.192;AN=52;BaseQRankSum=9.487;DP=628;FS=14.555;HRun=0;HaplotypeScore=256.8403;InbreedingCoeff=-0.0282;MQ=69.59;MQ0=1;MQRankSum=-8.505;QD=15.79;ReadPosRankSum=3.817;VQSLOD=1.6010;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:5:3.41:0,3,19	0/0:10,0:10:12.04:0,12,343	0/0:32,0:24:25.65:0,26,516	0/0:31,0:31:44.22:0,44,1100	0/1:26,0:31:15.53:16,0,333	0/0:25,0:25:60.05:0,60,1378	0/0:24,0:24:57.13:0,57,1402	0/0:33,0:33:41.80:0,42,865	0/0:32,0:32:66.21:0,66,1892	0/1:42,13:55:99:1218,0,1136	0/1:18,6:25:99:518,0,333	0/0:18,0:18:48.15:0,48,1421	0/0:31,0:31:87.30:0,87,2281	0/0:23,0:23:66.23:0,66,1900	0/1:16,9:25:99:540,0,270	0/1:23,6:29:99:578,0,399	0/0:23,0:23:51.17:0,51,1447	1/1:12,1:13:15.05:287,15,0	./.	0/0:11,0:12:16.18:0,16,182	0/0:1,0:1:3.01:0,3,37	0/0:24,0:24:57.19:0,57,1396	0/0:23,0:23:51.17:0,51,1467	0/0:29,0:29:66.23:0,66,2078	0/1:24,8:34:99:648,0,337	0/1:14,0:18:76.67:77,0,134	0/1:17,0:17:35.91:36,0,200	./.
chr10	44896204	.	CAGA	C	1913.27	PASS	AB=0.821;AC=8;AF=0.148;AN=54;BaseQRankSum=11.573;DP=659;FS=16.462;HRun=0;HaplotypeScore=201.7593;InbreedingCoeff=-0.1821;MQ=48.65;MQ0=38;MQRankSum=-8.560;QD=6.81;ReadPosRankSum=2.861;VQSLOD=1.8875;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:3:3.01:0,3,41	0/0:6,0:6:18.06:0,18,276	0/1:55,1:16:24.19:24,0,474	0/1:52,1:20:2.11:2,0,336	0/0:28,0:27:47.22:0,47,544	0/0:21,0:21:60.20:0,60,1234	0/0:28,0:28:83.77:0,84,1531	0/0:41,0:33:75.15:0,75,1312	0/0:29,0:29:72.22:0,72,1374	0/1:36,14:49:99:648,0,561	0/1:19,5:22:99:107,0,253	0/0:24,0:24:72.23:0,72,1445	0/0:26,0:26:75.25:0,75,1517	0/0:24,0:24:63.18:0,63,1263	0/1:12,19:31:99:584,0,289	0/1:14,10:24:99:321,0,367	0/0:26,0:26:72.25:0,72,1520	0/1:13,1:13:58.95:59,0,186	0/0:16,0:9:20.98:0,21,227	0/0:12,0:11:21.03:0,21,272	0/0:2,0:1:3.01:0,3,50	0/0:19,0:19:51.04:0,51,1004	0/0:20,0:20:60.20:0,60,1200	0/0:24,0:24:66.01:0,66,1327	0/1:19,8:27:99:296,0,156	0/0:15,0:14:41.47:0,41,506	0/0:13,0:13:23.16:0,23,237	./.
chr10	44896218	.	GC	G	118.77	PASS	AB=0.761;AC=4;AF=0.077;AN=52;BaseQRankSum=10.091;DP=617;FS=2.837;HRun=1;HaplotypeScore=170.3415;InbreedingCoeff=-0.1055;MQ=45.81;MQ0=36;MQRankSum=-7.646;QD=1.10;ReadPosRankSum=2.421;VQSLOD=-0.6485;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:3:2.94:0,3,29	0/0:8,0:8:18.06:0,18,259	0/0:54,0:13:30.83:0,31,398	0/0:55,0:16:28.04:0,28,605	0/0:24,1:23:38.79:0,39,436	0/0:22,0:22:63.21:0,63,1002	0/0:28,0:28:81.20:0,81,1192	0/0:34,0:26:63.21:0,63,1003	0/0:24,0:24:72.25:0,72,1151	0/1:28,13:41:45.11:45,0,872	0/0:16,4:17:30.66:0,31,491	0/0:22,0:22:66.23:0,66,1053	0/0:25,0:25:72.25:0,72,1147	0/0:22,0:22:66.23:0,66,1053	0/1:13,18:31:88.28:88,0,449	0/1:15,9:24:60.62:61,0,457	0/0:29,0:29:81.28:0,81,1290	0/1:11,1:11:32.03:32,0,258	0/0:9,0:4:6.01:0,6,69	0/0:11,0:10:21.04:0,21,238	./.	0/0:20,0:20:57.19:0,57,911	0/0:22,0:22:60.20:0,60,948	0/0:26,0:26:78.17:0,78,1191	0/0:14,7:20:1.54:0,2,383	0/0:14,0:13:39.04:0,39,406	0/0:12,0:12:27.24:0,27,274	./.
chr10	44896221	.	GAAGCAGAA	G	2350.71	PASS	AB=0.771;AC=6;AF=0.115;AN=52;BaseQRankSum=10.134;DP=617;FS=17.463;HRun=0;HaplotypeScore=233.2462;InbreedingCoeff=-0.1543;MQ=46.96;MQ0=36;MQRankSum=-9.543;QD=15.78;ReadPosRankSum=0.807;VQSLOD=1.5252;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:3:2.96:0,3,48	0/0:8,0:8:1.61:0,2,97	0/0:52,0:12:31.88:0,32,756	0/0:56,0:18:53.27:0,53,1071	0/0:24,0:22:52.35:0,52,593	0/0:21,0:21:63.21:0,63,2468	0/0:24,0:24:69.18:0,69,2357	0/0:35,0:26:63.17:0,63,1017	0/0:25,0:25:75.26:0,75,2906	0/1:28,13:41:99:678,0,507	0/1:14,4:17:92.43:92,0,263	0/0:23,0:23:69.24:0,69,2643	0/0:26,0:26:78.27:0,78,3069	0/0:22,0:22:66.23:0,66,2701	0/1:13,18:31:99:844,0,252	0/1:15,9:24:99:530,0,204	0/0:29,0:29:81.23:0,81,3279	0/1:10,1:11:85.23:85,0,203	0/0:9,0:4:6:0,6,72	0/0:11,0:10:23.97:0,24,305	./.	0/0:20,0:20:60.21:0,60,2334	0/0:26,0:26:78.23:0,78,2522	0/0:26,0:26:78.20:0,78,2709	0/1:12,7:20:99:242,0,298	0/0:12,0:11:32.36:0,32,407	0/0:12,0:12:29.40:0,29,371	./.
chr10	44896222	.	AAGC	A	4939.35	PASS	AB=1.000;AC=22;AF=0.423;AN=52;BaseQRankSum=15.023;DP=615;FS=8.777;HRun=0;HaplotypeScore=170.9521;InbreedingCoeff=0.4603;MQ=47.09;MQ0=34;MQRankSum=-13.661;QD=18.71;ReadPosRankSum=-1.350;VQSLOD=3.7651;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,1:3:3.01:51,3,0	1/1:7,0:7:15.05:241,15,0	0/0:51,0:12:15.83:0,16,452	0/0:55,0:18:39.25:0,39,612	1/1:10,14:22:48.88:677,49,0	0/0:21,0:21:60.20:0,60,1300	0/0:23,0:23:63.08:0,63,1231	0/1:36,0:27:20.39:277,0,20	0/0:26,0:26:75.23:0,75,1581	0/1:40,0:40:99:787,0,145	0/1:21,0:18:61.43:155,0,61	0/0:23,0:23:69.22:0,69,1425	0/0:26,0:26:78.24:0,78,1616	0/0:22,0:22:63.22:0,63,1393	0/1:31,0:31:46.19:709,0,46	0/1:23,0:23:99:438,0,118	0/0:29,0:29:81.24:0,81,1734	0/1:12,0:11:52.54:53,0,73	1/1:9,2:6:5.99:73,6,0	1/1:2,9:10:18.03:270,18,0	./.	0/0:20,0:20:60.14:0,60,1288	0/0:26,0:26:75.04:0,75,1334	0/0:26,0:26:64.80:0,65,1423	1/1:20,0:19:6.43:246,6,0	1/1:2,10:11:33.07:511,33,0	1/1:2,10:12:30.06:452,30,0	./.
chr10	44896224	.	GC	G	645.62	PASS	AB=0.896;AC=18;AF=0.346;AN=52;BaseQRankSum=13.785;DP=606;FS=8.852;HRun=1;HaplotypeScore=170.4778;InbreedingCoeff=0.4001;MQ=47.46;MQ0=32;MQRankSum=-11.186;QD=3.23;ReadPosRankSum=1.032;VQSLOD=-0.4697;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,0:2:2.37:8,2,0	1/1:2,5:7:14.75:122,15,0	0/0:48,2:12:8.50:0,8,405	0/0:52,2:17:34.79:0,35,664	1/1:23,0:21:30.66:116,31,0	0/0:22,0:22:60.20:0,60,958	0/0:22,0:22:62.97:0,63,948	0/0:34,0:25:53.17:0,53,459	0/0:27,0:27:81.24:0,81,1244	0/1:31,8:39:99:156,0,466	0/0:17,4:18:1.06:0,1,281	0/0:23,0:23:69.24:0,69,1101	0/0:26,0:26:78.25:0,78,1215	0/0:22,0:22:66.20:0,66,1027	0/1:27,4:31:99:133,0,258	0/1:19,4:23:92.50:92,0,307	0/0:31,0:31:87.27:0,87,1354	0/1:10,1:11:10.11:10,0,121	0/1:10,0:5:2.73:3,0,10	1/1:9,0:8:10.73:35,11,0	./.	0/0:22,0:22:66.21:0,66,1029	0/0:25,0:25:75.25:0,75,1183	0/0:26,0:26:47.47:0,47,1078	0/1:19,0:19:48.54:49,0,201	1/1:12,0:11:2.88:44,3,0	1/1:11,0:11:14.82:50,15,0	./.
chr10	44896225	.	CAGA	C	2761.99	PASS	AB=0.995;AC=19;AF=0.352;AN=54;BaseQRankSum=13.057;DP=617;FS=5.498;HRun=0;HaplotypeScore=182.8668;InbreedingCoeff=0.2548;MQ=47.37;MQ0=29;MQRankSum=-11.333;QD=10.54;ReadPosRankSum=-0.305;VQSLOD=2.5433;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:3,0:2:3.01:32,3,0	0/1:8,0:8:37.13:94,0,37	0/0:48,0:13:32.69:0,33,514	0/0:54,0:17:29.29:0,29,654	1/1:22,0:20:13.70:351,14,0	0/0:23,0:23:69.16:0,69,1278	0/0:21,0:21:53.14:0,53,1050	1/1:10,23:25:50.17:710,50,0	0/0:28,0:28:81.25:0,81,1607	0/1:40,0:40:99:340,0,280	0/1:22,0:19:48.11:48,0,161	0/0:24,0:24:69.17:0,69,1319	0/0:26,0:26:72.23:0,72,1477	0/0:22,0:22:66.21:0,66,1330	0/1:31,0:31:99:341,0,160	0/1:23,0:23:99:195,0,194	0/0:31,0:31:87.28:0,87,1754	0/1:12,0:11:4.91:5,0,105	0/1:11,0:6:13.01:25,0,13	1/1:9,0:8:15.51:160,16,0	0/0:3,0:2:1.25:0,1,3	0/0:23,0:23:66.22:0,66,1323	0/0:25,0:25:66.21:0,66,1232	0/0:26,0:26:54.89:0,55,1317	0/1:19,1:19:92.39:131,0,92	0/1:15,0:14:6.07:256,0,6	1/1:13,0:13:25.47:251,25,0	./.
chr10	44896227	.	GAA	G	898.15	PASS	AB=0.869;AC=8;AF=0.148;AN=54;BaseQRankSum=9.492;DP=630;FS=1.543;HRun=2;HaplotypeScore=187.3667;InbreedingCoeff=-0.1263;MQ=47.16;MQ0=28;MQRankSum=-8.939;QD=4.70;ReadPosRankSum=-0.278;VQSLOD=-0.4849;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:3,0:2:2.04:0,2,6	0/1:3,5:8:29.62:133,0,30	0/0:49,0:13:34.19:0,34,597	0/0:57,0:19:48.58:0,49,787	0/0:23,0:21:35.90:0,36,189	0/0:24,0:24:72.17:0,72,1366	0/0:21,0:21:60.15:0,60,1112	0/1:34,0:25:54.82:64,0,55	0/0:28,0:28:84.27:0,84,1661	0/1:32,8:40:99:298,0,271	0/1:18,4:19:29.20:29,0,155	0/0:24,0:24:72.23:0,72,1415	0/0:26,0:26:78.27:0,78,1555	0/0:22,0:22:66.23:0,66,1333	0/1:28,4:32:99:268,0,141	0/1:19,4:23:99:164,0,171	0/0:32,0:32:87.30:0,87,1757	0/1:10,1:10:6.14:6,0,148	0/0:10,0:6:8.24:0,8,83	0/0:10,0:9:16.06:0,16,82	0/0:4,0:3:1.82:0,2,5	0/0:23,0:23:69.24:0,69,1372	0/0:25,0:25:75.16:0,75,1383	0/0:28,0:28:77.64:0,78,1459	0/1:21,0:20:65.44:65,0,131	0/0:16,0:15:35.95:0,36,216	0/0:14,0:14:28.37:0,28,120	./.
chr10	44896229	.	A	AGAG	7456.75	PASS	AB=0.967;AC=18;AF=0.333;AN=54;BaseQRankSum=9.440;DP=629;FS=7.614;HRun=0;HaplotypeScore=182.3503;InbreedingCoeff=0.4520;MQ=47.30;MQ0=24;MQRankSum=-9.615;QD=29.36;ReadPosRankSum=0.138;VQSLOD=4.6693;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:3,0:2:2.04:0,2,6	1/1:8,0:8:23.15:184,23,0	0/0:49,0:13:12.60:0,13,447	0/0:56,0:20:33.04:0,33,673	0/1:20,0:19:94.03:94,0,104	0/0:25,0:25:72.13:0,72,1089	0/0:19,0:20:53.14:0,53,847	0/1:33,0:25:55.81:289,0,56	0/0:28,0:28:84.25:0,84,1343	1/1:26,14:40:99:2166,117,0	1/1:13,9:19:40.69:826,41,0	0/0:24,0:24:69.17:0,69,1114	0/0:26,0:26:78.23:0,78,1246	0/0:22,0:22:66.21:0,66,1074	1/1:26,7:33:83.63:1446,84,0	1/1:15,8:23:63.19:1155,63,0	0/0:32,0:32:87.28:0,87,1438	0/1:9,3:11:9.28:312,0,9	0/0:9,0:5:4.49:0,4,28	0/1:11,0:10:13.22:13,0,41	0/0:4,0:3:0.92:0,1,4	0/0:23,0:23:66.22:0,66,1096	0/0:26,0:26:72.20:0,72,1130	0/0:27,0:28:55.84:0,56,1108	1/1:12,9:20:35.91:757,36,0	0/1:16,0:15:72.20:120,0,72	0/1:15,0:15:39.57:95,0,40	./.
chr10	44896249	.	AAGGG	A	31.63	PASS	AB=0.922;AC=6;AF=0.111;AN=54;BaseQRankSum=5.310;DP=600;FS=4.468;HRun=0;HaplotypeScore=206.8303;InbreedingCoeff=-0.1183;MQ=51.10;MQ0=5;MQRankSum=-4.558;QD=0.46;ReadPosRankSum=-0.056;VQSLOD=2.3397;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:2,0:2:2.97:0,3,20	0/0:10,0:10:30.10:0,30,809	0/0:36,0:13:36.08:0,36,629	0/0:38,0:20:48.10:0,48,995	0/1:19,0:18:1.75:2,0,646	0/0:21,0:21:63.22:0,63,1545	0/0:20,0:20:54.17:0,54,1272	0/0:24,0:20:45.15:0,45,853	0/0:31,0:31:93.32:0,93,2397	0/0:42,0:42:99:0,112,2220	0/0:29,0:28:71.74:0,72,1673	0/0:23,0:23:66.23:0,66,1673	0/0:27,0:27:75.26:0,75,1789	0/0:18,0:18:51.11:0,51,1053	0/0:34,0:34:83.30:0,83,1587	0/0:23,0:23:62.54:0,63,1298	0/0:35,0:35:96.33:0,96,2423	0/1:11,0:11:31.21:31,0,509	0/0:8,1:8:15:0,15,253	0/1:12,0:10:8.38:8,0,328	0/1:2,1:3:39.58:40,0,41	0/0:21,0:21:63.22:0,63,1539	0/0:28,0:28:81.26:0,81,2003	0/0:35,0:35:95.81:0,96,2245	0/0:25,0:24:56.20:0,56,980	0/1:10,1:11:16.16:16,0,398	0/1:11,2:13:48.26:48,0,310	./.
chr10	44896262	.	GAGA	G	1328.59	PASS	AB=0.917;AC=13;AF=0.241;AN=54;BaseQRankSum=9.417;DP=631;FS=49.374;HRun=0;HaplotypeScore=187.9173;InbreedingCoeff=-0.1316;MQ=48.93;MQ0=10;MQRankSum=-8.941;QD=5.27;ReadPosRankSum=0.899;VQSLOD=0.8619;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:5:7.92:0,8,116	0/0:11,0:11:33.11:0,33,726	0/0:39,0:10:26.69:0,27,296	0/0:36,0:15:38.27:0,38,487	0/1:22,0:20:74.37:79,0,74	0/0:23,0:23:63.10:0,63,1086	0/0:21,0:21:60.07:0,60,941	0/0:18,0:14:36.10:0,36,593	0/0:34,0:34:96.28:0,96,1911	0/1:33,10:43:99:421,0,1274	0/1:27,6:32:68.76:69,0,1228	0/0:28,0:28:78.20:0,78,1451	0/0:29,0:29:75.11:0,75,1289	0/0:11,0:11:30.03:0,30,604	0/1:24,6:30:99:306,0,801	0/1:21,6:27:99:184,0,921	0/0:37,0:37:99:0,99,1834	0/1:14,0:14:1.53:2,0,427	0/1:11,0:10:9.01:9,0,73	0/1:16,0:14:9.12:9,0,192	1/1:3,0:3:5.34:23,5,0	0/0:20,0:20:51.10:0,51,997	0/0:28,0:28:76.10:0,76,1565	0/0:39,0:39:99:0,102,1780	0/1:20,8:27:99:267,0,600	0/1:13,0:13:24.21:24,0,155	0/1:12,0:12:82.02:83,0,82	./.
chr10	44896264	.	G	GAAGGAGGAGGAA	6247.47	PASS	AB=1.000;AC=15;AF=0.278;AN=54;BaseQRankSum=7.459;DP=637;FS=17.276;HRun=0;HaplotypeScore=291.7319;InbreedingCoeff=0.8206;MQ=48.98;MQ0=10;MQRankSum=-9.020;QD=54.80;ReadPosRankSum=-0.047;VQSLOD=3.3267;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,0:5:0.76:169,1,0	0/0:11,0:11:33.11:0,33,1173	0/0:40,0:11:26.60:0,27,299	0/0:35,0:15:38.76:0,39,670	1/1:18,4:21:41.70:1227,42,0	0/0:23,0:23:43.47:0,43,1444	0/0:21,0:21:60.06:0,60,1423	0/0:20,0:17:38.17:0,38,796	0/0:34,0:34:99:0,102,2990	0/0:44,0:44:99:0,123,2527	0/0:33,0:32:74.94:0,75,2216	0/0:29,0:29:81.18:0,81,2141	0/0:29,0:29:75.10:0,75,1998	0/0:12,0:12:33.03:0,33,1008	0/1:30,0:30:26.74:27,0,1685	0/0:28,0:28:38.17:0,38,1774	0/0:37,0:37:99:0,99,2789	0/0:14,0:14:5.66:0,6,711	1/1:11,0:10:15.01:325,15,0	1/1:13,4:15:39.09:1402,39,0	1/1:3,0:3:6.02:273,6,0	0/0:19,0:19:51.11:0,51,1549	0/0:28,0:28:75.89:0,76,2449	0/0:39,0:39:99:0,102,2720	0/0:27,0:26:40.04:0,40,1346	1/1:10,3:13:27.09:1238,27,0	1/1:9,3:12:33.11:1588,33,0	./.
chr10	44896296	.	A	AAGG	11872.40	PASS	AC=30;AF=0.556;AN=54;BaseQRankSum=11.584;DP=643;FS=22.489;HRun=0;HaplotypeScore=164.0306;InbreedingCoeff=0.9757;MQ=55.02;MQ0=3;MQRankSum=-12.860;QD=37.33;ReadPosRankSum=-1.013;VQSLOD=3.5093;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,6:9:13.29:237,13,0	1/1:5,5:10:24.04:436,24,0	0/0:29,0:15:30.98:0,31,407	0/0:31,0:17:10.53:0,11,245	1/1:5,8:11:18.06:382,18,0	0/0:20,0:20:54.18:0,54,808	0/0:26,0:26:72.23:0,72,1071	1/1:17,9:25:53.96:772,54,0	0/0:34,0:34:93.19:0,93,1282	1/1:19,27:44:99:1828,99,0	1/1:12,27:39:89.67:1505,90,0	0/0:22,0:22:51.16:0,51,753	0/0:29,0:29:72.15:0,72,1011	0/0:14,0:14:34.01:0,34,523	1/1:12,20:31:68.84:1303,69,0	1/1:10,24:34:93.14:1770,93,0	0/0:34,0:34:70.11:0,70,1163	1/1:7,9:15:29.98:508,30,0	1/1:6,6:12:18.02:284,18,0	1/1:9,11:17:36.12:686,36,0	1/1:5,2:7:8.88:58,9,0	0/0:22,0:22:57.18:0,57,843	0/0:30,0:30:81.27:0,81,1229	0/0:34,0:34:92.29:0,92,1417	1/1:6,22:28:75.14:1429,75,0	1/1:7,8:13:18.06:358,18,0	1/1:5,5:10:15.05:316,15,0	./.
chr10	44896313	.	G	GTAA	224.21	PASS	AB=0.967;AC=9;AF=0.167;AN=54;BaseQRankSum=3.731;DP=622;FS=5.914;HRun=0;HaplotypeScore=191.0036;InbreedingCoeff=0.3282;MQ=58.59;MQ0=2;MQRankSum=-2.787;QD=3.56;ReadPosRankSum=-4.009;VQSLOD=1.2511;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:9,2:11:7.24:126,7,0	0/0:8,0:8:24.04:0,24,391	0/0:23,0:13:4.20:0,4,285	0/0:33,0:21:27.05:0,27,489	0/1:7,0:6:13.35:20,0,13	0/0:20,0:20:60.14:0,60,1028	0/0:27,0:27:81.16:0,81,1366	0/0:26,0:23:63.54:0,64,932	0/0:30,0:30:90.28:0,90,1584	0/0:42,0:41:99:0,114,1949	0/0:42,0:42:99:0,114,1946	0/0:20,0:20:60.19:0,60,1061	0/0:28,0:28:81.23:0,81,1395	0/0:15,0:15:42.14:0,42,782	0/0:35,0:34:99:0,102,1715	0/0:35,0:35:99:0,105,1857	0/0:37,0:37:99:0,102,1778	0/0:18,0:18:48.12:0,48,859	1/1:7,1:8:7.43:92,7,0	0/1:14,0:13:41.23:45,0,41	0/1:4,1:5:14.26:28,0,14	0/0:23,0:22:63.17:0,63,1112	0/0:29,0:29:81.17:0,81,1361	0/0:38,0:38:99:0,111,1959	0/0:30,0:29:81.26:0,81,1453	0/1:12,0:10:0.88:1,0,87	0/1:6,0:6:7.97:48,0,8	./.
chr10	44896345	.	AGAG	A	7540.63	PASS	AB=0.933;AC=17;AF=0.304;AN=56;BaseQRankSum=11.533;DP=665;FS=5.402;HRun=0;HaplotypeScore=153.6214;InbreedingCoeff=0.8794;MQ=54.55;MQ0=7;MQRankSum=-9.865;QD=28.67;ReadPosRankSum=2.280;VQSLOD=5.1473;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:12:21.07:0,21,394	1/1:1,6:7:18.06:270,18,0	0/0:25,0:9:18.02:0,18,308	0/0:40,0:16:21.92:0,22,280	0/0:13,0:12:9.03:0,9,162	0/0:19,0:19:42.14:0,42,884	0/0:24,0:24:64.74:0,65,1208	1/1:13,11:22:45.13:607,45,0	0/0:29,0:28:65.96:0,66,1307	1/1:18,33:51:99:1567,111,0	1/1:8,31:39:78.26:1163,78,0	0/0:17,0:17:42.13:0,42,809	0/0:26,0:26:69.21:0,69,1313	0/0:23,0:23:63.22:0,63,1295	1/1:6,37:43:90.26:1309,90,0	1/1:9,27:36:81.23:1166,81,0	0/0:35,0:35:84.25:0,84,1694	1/1:9,11:20:18.10:496,18,0	0/0:7,0:6:12.04:0,12,224	0/0:16,0:15:21.07:0,21,415	0/0:13,0:11:18.06:0,18,313	0/0:21,0:20:57.20:0,57,1166	0/0:30,0:30:84.29:0,84,1700	0/0:38,0:38:87.24:0,87,1683	1/1:7,22:28:63.21:945,63,0	0/1:13,1:12:18.06:18,0,421	0/0:11,0:11:21.07:0,21,413	0/0:2,0:2:6.02:0,6,126
chr10	44896500	.	C	CA	5037.27	PASS	AB=0.720;AC=29;AF=0.518;AN=56;BaseQRankSum=2.555;DP=673;FS=0.688;HRun=8;HaplotypeScore=108.7359;InbreedingCoeff=0.8844;MQ=63.29;MQ0=1;MQRankSum=-9.559;QD=14.47;ReadPosRankSum=-2.232;VQSLOD=4.2354;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:20:41.06:274,41,0	1/1:1,15:16:42.12:485,42,0	0/0:24,0:23:32.31:0,32,269	0/0:21,0:18:26.21:0,26,223	1/1:10,0:10:14.99:129,15,0	0/0:19,0:19:54.03:0,54,494	0/0:21,0:21:48:0,48,434	0/0:38,0:38:93.54:0,94,870	0/0:35,0:35:90.04:0,90,822	1/1:41,31:71:49.32:1026,49,0	1/1:15,15:30:20.03:403,20,0	0/0:18,0:18:48.02:0,48,439	0/0:27,0:27:75.03:0,75,682	0/0:18,0:18:45.01:0,45,412	1/1:23,21:43:38.64:670,39,0	0/1:22,14:36:7.06:450,0,7	0/0:20,0:20:60.01:0,60,543	1/1:9,6:15:3.55:182,4,0	1/1:16,0:14:35.61:221,36,0	1/1:9,0:8:11.97:96,12,0	1/1:11,0:11:11.55:63,12,0	0/0:30,0:30:78.04:0,78,714	0/0:21,0:21:54.03:0,54,494	0/0:33,0:33:87.03:0,87,796	1/1:18,20:37:39.86:658,40,0	1/1:11,2:12:24.92:215,25,0	1/1:9,0:9:15:136,15,0	1/1:7,0:6:4.24:28,4,0
chr10	44896501	.	A	AG	2090.09	PASS	AB=0.881;AC=19;AF=0.339;AN=56;BaseQRankSum=9.697;DP=667;FS=2.769;HRun=0;HaplotypeScore=117.8930;InbreedingCoeff=0.1154;MQ=61.89;MQ0=1;MQRankSum=-7.896;QD=6.01;ReadPosRankSum=1.837;VQSLOD=3.2694;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,13:20:5.14:342,5,0	1/1:16,0:16:16.58:96,17,0	0/0:23,0:22:42.57:0,43,602	0/0:19,0:16:35.44:0,35,419	1/1:5,5:10:6.59:218,7,0	0/0:19,0:19:57.18:0,57,780	0/0:20,0:20:60.17:0,60,772	0/0:37,0:37:99:0,111,1444	0/0:35,0:35:99:0,102,1359	0/1:71,0:70:99:177,0,672	0/1:29,0:29:57:57,0,259	0/0:18,0:18:54.16:0,54,720	0/0:26,0:26:78.25:0,78,1073	0/0:18,0:18:51.15:0,51,681	0/1:44,0:43:99:120,0,393	0/1:36,0:36:79.04:79,0,394	0/0:21,0:21:60.20:0,60,833	0/1:15,0:15:34.90:35,0,203	0/1:8,9:15:3.56:306,0,4	0/1:4,5:8:13:180,0,13	0/1:8,4:12:26.15:95,0,26	0/0:29,0:29:84.27:0,84,1143	0/0:21,0:21:60.02:0,60,792	0/0:33,0:33:99:0,99,1304	0/1:37,0:36:99:135,0,253	0/1:9,4:12:21.48:194,0,21	1/1:6,3:10:20.14:206,20,0	0/1:6,1:6:29.23:29,0,48
chr10	44896503	.	A	AG	1567.78	PASS	AB=0.913;AC=18;AF=0.321;AN=56;BaseQRankSum=11.193;DP=662;FS=0.320;HRun=0;HaplotypeScore=116.7932;InbreedingCoeff=0.1614;MQ=62.71;MQ0=1;MQRankSum=-9.755;QD=4.58;ReadPosRankSum=0.830;VQSLOD=3.3537;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,4:20:14.41:281,14,0	0/1:16,0:16:0.21:78,0,0	0/0:23,0:22:42.51:0,43,632	0/0:20,0:17:39.62:0,40,459	0/1:9,1:10:2.56:59,0,3	0/0:19,0:19:57.18:0,57,780	0/0:20,0:20:57.16:0,57,738	0/0:37,0:37:99:0,108,1429	0/0:33,0:33:99:0,99,1335	0/1:65,0:65:99:179,0,685	0/1:29,0:29:46.59:47,0,307	0/0:18,0:18:54.16:0,54,721	0/0:27,0:27:81.25:0,81,1101	0/0:19,0:19:53.62:0,54,671	0/1:45,0:44:99:118,0,414	0/1:35,0:35:82.99:83,0,399	0/0:22,0:22:66.18:0,66,883	0/1:15,0:15:35.87:36,0,204	0/1:14,2:16:18.25:198,0,18	0/1:8,1:8:4.94:37,0,5	1/1:5,2:11:23.80:184,24,0	0/0:29,0:29:87.26:0,87,1160	0/0:21,0:21:63.18:0,63,833	0/0:32,0:32:93.26:0,93,1260	0/1:36,0:35:99:137,0,218	0/1:6,4:11:2.72:164,0,3	0/1:6,6:12:22.55:54,0,23	1/1:7,0:6:13.46:90,13,0
chr10	44896507	.	AAG	A	2816.49	PASS	AB=0.769;AC=7;AF=0.125;AN=56;BaseQRankSum=3.446;DP=657;FS=3.572;HRun=0;HaplotypeScore=123.1633;InbreedingCoeff=-0.1436;MQ=62.52;MQ0=1;MQRankSum=-6.187;QD=12.63;ReadPosRankSum=0.406;VQSLOD=3.4849;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:21:45.12:0,45,438	0/0:16,0:16:45.05:0,45,432	0/0:21,0:20:15.79:0,16,621	0/0:19,0:16:38.19:0,38,526	0/0:10,0:10:22.17:0,22,161	0/0:18,0:18:54.18:0,54,933	0/0:20,0:20:57.12:0,57,874	0/0:39,0:39:99:0,114,1763	0/0:33,0:33:99:0,99,1622	0/1:38,23:61:99:873,0,749	0/1:19,9:27:99:406,0,265	0/0:18,0:18:51.15:0,51,831	0/0:29,0:29:84.23:0,84,1358	0/0:22,0:22:60.13:0,60,913	0/1:27,11:37:99:397,0,503	0/1:20,14:34:99:584,0,338	0/0:22,0:22:66.21:0,66,1099	0/1:9,6:15:99:268,0,144	0/0:19,0:17:46.98:0,47,461	0/0:10,0:9:15.40:0,15,174	0/0:11,0:11:29.21:0,29,292	0/0:30,0:30:90.26:0,90,1451	0/0:19,0:19:57.18:0,57,956	0/0:35,0:35:99:0,102,1634	0/1:25,10:34:99:407,0,377	0/1:11,1:11:10.52:11,0,275	0/0:13,0:13:16.91:0,17,100	0/0:7,0:6:15.02:0,15,185
chr10	44896539	.	T	TAGAAGC	5472.94	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=5.815;DP=613;FS=10.474;HRun=0;HaplotypeScore=156.1216;InbreedingCoeff=0.8904;MQ=54.29;MQ0=0;MQRankSum=-7.672;QD=28.50;ReadPosRankSum=-2.714;VQSLOD=3.4343;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:25:48.01:0,48,845	0/0:17,0:17:39.09:0,39,712	0/0:18,0:16:14.18:0,14,194	0/0:23,0:19:35.60:0,36,441	0/0:13,0:13:32.68:0,33,460	0/0:19,0:19:24.04:0,24,399	0/0:16,0:16:32.89:0,33,502	0/0:24,0:24:45.05:0,45,518	0/0:33,0:33:81.17:0,81,1431	1/1:40,5:45:77.92:1202,78,0	1/1:19,1:19:26.88:388,27,0	0/0:20,0:20:48.05:0,48,753	0/0:25,0:25:60.07:0,60,1042	0/0:18,0:18:48.12:0,48,885	1/1:30,7:37:77.41:1098,77,0	1/1:23,7:30:40.43:855,40,0	0/0:24,0:24:44.74:0,45,900	1/1:12,1:13:30.04:468,30,0	0/0:14,0:14:26.93:0,27,378	0/0:13,0:12:32.77:0,33,458	0/0:19,0:18:32.70:0,33,532	0/0:27,0:27:51.13:0,51,980	0/0:14,0:14:33.05:0,33,521	0/0:36,0:36:84.14:0,84,1401	1/1:18,12:30:50.32:1441,50,0	0/1:17,0:16:19.97:20,0,489	0/0:15,0:15:26.90:0,27,421	0/0:6,0:6:12.04:0,12,259
chr10	44896582	.	T	TGAAGCAGAAGCA	536.29	PASS	AB=1.000;AC=6;AF=0.107;AN=56;BaseQRankSum=0.133;DP=653;FS=14.884;HRun=0;HaplotypeScore=249.6268;InbreedingCoeff=0.2519;MQ=57.64;MQ0=5;MQRankSum=-1.416;QD=4.97;ReadPosRankSum=-5.459;VQSLOD=-0.5087;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:37:46.38:0,46,796	0/1:10,0:10:34.34:34,0,146	0/1:32,0:18:6.45:194,0,6	0/1:26,0:18:94.48:143,0,94	0/0:16,0:15:12:0,12,139	0/0:15,0:15:24.06:0,24,479	0/0:17,0:17:30.08:0,30,541	0/0:23,0:20:20.95:0,21,209	0/0:31,0:31:63.13:0,63,1356	0/0:40,0:41:34.46:0,34,689	0/0:24,0:24:14.77:0,15,157	0/0:17,0:17:27.09:0,27,717	0/0:22,0:22:33.08:0,33,689	0/0:23,0:23:35.66:0,36,718	0/0:34,0:40:69.20:0,69,1394	0/0:28,0:31:51.01:0,51,1091	1/1:10,15:27:8.99:280,9,0	0/0:13,0:14:26.93:0,27,324	0/1:13,0:13:6.17:6,0,108	0/0:17,0:15:11.78:0,12,94	0/0:18,0:17:13.43:0,13,240	0/0:20,0:20:30.08:0,30,687	0/0:14,0:14:11.97:0,12,169	0/0:42,0:42:90.26:0,90,2257	0/0:29,0:29:20.92:0,21,339	0/0:25,0:24:27:0,27,418	0/0:22,0:22:27.51:0,28,482	0/0:5,0:5:5.99:0,6,69
chr10	44896645	.	GGCAGAAGCAGAA	G	5214.86	PASS	AB=0.980;AC=24;AF=0.444;AN=54;BaseQRankSum=5.469;DP=543;FS=1.579;HRun=0;HaplotypeScore=231.4861;InbreedingCoeff=0.3780;MQ=47.57;MQ0=33;MQRankSum=-8.022;QD=19.39;ReadPosRankSum=0.404;VQSLOD=3.7970;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:19,0:16:30.27:31,0,30	1/1:6,0:6:11.76:195,12,0	0/0:42,0:11:2.71:0,3,59	0/0:37,0:13:17.73:0,18,363	1/1:7,0:7:0.08:53,0,0	0/0:14,0:14:30.10:0,30,949	0/0:26,0:26:51.14:0,51,1364	1/1:20,0:20:17.91:302,18,0	0/0:28,0:28:57.20:0,57,1959	0/1:37,1:39:73.18:868,0,73	0/1:25,1:27:21.77:265,0,22	0/0:15,0:15:39.13:0,39,1609	0/0:15,0:15:39.12:0,39,1432	0/0:15,0:15:33.10:0,33,1168	1/1:26,8:34:56.94:1480,57,0	1/1:28,7:35:13.72:1163,14,0	0/0:13,0:15:21.68:0,22,285	0/1:15,1:16:48.30:451,0,48	1/1:13,0:8:2.89:17,3,0	0/1:9,0:9:9.50:10,0,30	1/1:9,0:9:3.47:26,3,0	0/0:17,0:17:24.04:0,24,559	0/0:11,0:11:21.07:0,21,708	0/0:38,0:38:66.08:0,66,2252	0/1:13,0:14:72.83:73,0,106	1/1:10,0:9:1.24:120,1,0	1/1:11,0:11:6.37:161,6,0	./.
chr10	44896663	.	AGCAG	A	1082.60	PASS	AB=0.923;AC=11;AF=0.204;AN=54;BaseQRankSum=9.520;DP=560;FS=14.693;HRun=0;HaplotypeScore=197.1156;InbreedingCoeff=0.1040;MQ=45.29;MQ0=37;MQRankSum=-8.197;QD=7.03;ReadPosRankSum=3.351;VQSLOD=1.8264;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:18,0:18:39.40:39,0,365	0/0:7,0:7:15.15:0,15,150	0/0:54,0:11:8.54:0,9,392	0/0:40,0:18:48.01:0,48,815	1/1:4,1:7:16.16:196,16,0	0/0:16,0:16:48.16:0,48,1044	0/0:24,0:24:69.22:0,69,1561	0/0:16,0:16:44.62:0,45,461	0/0:26,0:26:78.27:0,78,1880	0/0:42,0:41:90.38:0,90,1319	0/0:25,0:26:34.15:0,34,599	0/0:17,0:17:48.16:0,48,1257	0/0:18,0:18:54.18:0,54,1270	0/0:13,0:13:39.10:0,39,908	0/1:29,0:29:99:106,0,437	0/1:34,0:34:28.04:28,0,679	0/1:19,0:19:80.93:81,0,203	0/0:19,0:19:33.17:0,33,394	0/0:9,0:6:10.33:0,10,99	0/1:6,3:13:88.01:352,0,88	0/1:11,0:11:15.57:16,0,172	0/0:12,0:12:36.12:0,36,758	0/0:17,0:17:39.13:0,39,846	0/0:32,0:32:87.16:0,87,2023	0/0:16,0:17:36.96:0,37,308	0/1:10,2:13:99:205,0,114	1/1:9,1:10:0.60:208,1,0	./.
chr10	44896669	.	AGCAG	A	1156.14	PASS	AB=0.915;AC=12;AF=0.222;AN=54;BaseQRankSum=8.664;DP=572;FS=2.376;HRun=0;HaplotypeScore=198.8994;InbreedingCoeff=-0.0764;MQ=46.42;MQ0=32;MQRankSum=-7.360;QD=6.08;ReadPosRankSum=4.709;VQSLOD=2.7555;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:17,3:20:99:147,0,219	0/0:5,0:6:14.65:0,15,141	0/0:48,0:10:30.10:0,30,456	0/0:41,0:19:51.17:0,51,888	0/1:7,0:9:18.79:19,0,43	0/0:16,0:16:11.57:0,12,968	0/0:21,0:21:63.22:0,63,1493	0/0:21,0:21:56.45:0,56,603	0/0:28,0:28:84.25:0,84,1929	0/0:45,0:44:92.47:0,92,1405	0/0:24,0:24:40.27:0,40,658	0/0:18,0:18:54.17:0,54,1326	0/0:20,0:20:60.20:0,60,1360	0/0:11,0:11:33.11:0,33,855	0/1:30,0:30:99:100,0,425	0/1:33,0:33:34.51:35,0,579	0/1:19,0:19:80.80:81,0,222	0/1:17,0:17:18.83:19,0,179	0/1:7,2:8:99:122,0,175	0/1:13,1:16:99:105,0,207	0/1:9,1:10:82.48:131,0,82	0/0:12,0:12:36.12:0,36,743	0/0:17,0:17:51.17:0,51,1021	0/0:32,0:32:93.21:0,93,2092	0/0:22,0:22:50.79:0,51,537	0/1:15,2:17:99:231,0,278	1/1:5,3:10:19.65:323,20,0	./.
chr10	44896671	.	C	CCG	1869.63	PASS	AB=0.873;AC=12;AF=0.222;AN=54;BaseQRankSum=7.051;DP=588;FS=6.251;HRun=0;HaplotypeScore=183.4211;InbreedingCoeff=-0.2821;MQ=46.44;MQ0=32;MQRankSum=-6.053;QD=7.16;ReadPosRankSum=2.475;VQSLOD=2.6295;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:17,2:20:32.52:33,0,228	0/1:3,2:6:86.49:97,0,86	0/0:49,0:11:32.30:0,32,413	0/0:41,0:19:50.81:0,51,726	0/0:10,0:10:18.29:0,18,99	0/0:16,0:16:31.92:0,32,717	0/0:21,0:21:63.22:0,63,1021	0/1:19,3:22:99:162,0,484	0/0:26,0:26:78.27:0,78,1272	0/1:39,9:47:99:432,0,1146	0/1:23,1:24:45.19:45,0,634	0/0:20,0:20:54.17:0,54,855	0/0:21,0:21:60.20:0,60,969	0/0:12,0:12:36.10:0,36,539	0/1:25,7:31:99:464,0,329	0/1:27,5:32:99:449,0,489	0/0:19,0:19:50.95:0,51,611	0/1:15,2:17:99:182,0,261	0/1:8,1:8:28.49:28,0,202	0/0:19,0:18:36.57:0,37,309	0/0:8,0:9:6.30:0,6,111	0/0:13,0:13:36.08:0,36,512	0/0:19,0:19:51.17:0,51,830	0/0:32,0:32:90.29:0,90,1436	0/1:21,2:23:3.35:3,0,505	0/1:15,3:18:95.89:96,0,312	0/1:10,0:10:25.27:25,0,34	./.
chr10	44896701	.	A	AG	398.91	PASS	AB=0.874;AC=8;AF=0.143;AN=56;BaseQRankSum=7.909;DP=679;FS=84.957;HRun=0;HaplotypeScore=196.5699;InbreedingCoeff=0.0401;MQ=47.14;MQ0=11;MQRankSum=-6.809;QD=2.39;ReadPosRankSum=-0.531;VQSLOD=-0.4133;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:28,2:29:23.12:23,0,664	0/0:3,0:3:9.03:0,9,126	0/0:19,0:14:42.09:0,42,522	0/0:19,0:15:37.79:0,38,447	0/0:30,1:34:16.46:0,16,518	0/0:24,0:24:69.21:0,69,932	0/0:17,0:17:51.17:0,51,712	0/0:32,0:30:87.27:0,87,1176	0/0:27,0:27:81.27:0,81,1132	0/0:53,0:51:99:0,143,1809	0/0:38,0:38:99:0,105,1405	0/0:16,0:16:48.16:0,48,671	0/0:24,0:24:72.24:0,72,1006	0/0:14,0:14:42.12:0,42,553	0/0:25,0:23:54.43:0,54,737	0/0:23,0:23:52.92:0,53,648	0/0:23,0:23:65.65:0,66,847	0/0:14,0:14:20.28:0,20,290	0/1:22,2:14:8.79:9,0,446	0/1:38,4:37:67.16:67,0,805	0/1:12,2:13:99:103,0,193	0/0:24,0:24:69.23:0,69,965	0/0:28,0:28:84.28:0,84,1171	0/0:33,0:33:90.30:0,90,1259	0/0:21,0:21:57.15:0,57,773	0/1:28,3:32:99:99,0,622	0/1:13,6:20:99:209,0,315	1/1:1,0:1:2.96:19,3,0
chr10	44896797	.	G	GAAC	165.59	PASS	AB=0.930;AC=5;AF=0.089;AN=56;BaseQRankSum=4.802;DP=564;FS=31.641;HRun=0;HaplotypeScore=138.4984;InbreedingCoeff=0.2087;MQ=60.72;MQ0=0;MQRankSum=-4.035;QD=2.47;ReadPosRankSum=-0.602;VQSLOD=0.6738;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:47.76:0,48,825	0/0:13,0:13:33.11:0,33,575	0/0:24,0:20:57.19:0,57,980	0/0:22,0:21:63.21:0,63,1078	0/1:23,1:23:12.99:13,0,723	0/0:18,0:18:51.15:0,51,850	0/0:20,0:20:60.20:0,60,1039	0/0:28,0:28:75.26:0,75,1319	0/0:16,0:16:48.16:0,48,842	0/0:41,0:41:99:0,119,2056	0/0:25,0:25:72.70:0,73,1217	0/0:10,0:10:30.10:0,30,529	0/0:14,0:14:39.13:0,39,674	0/0:14,0:14:42.10:0,42,708	0/0:16,0:16:6.96:0,7,630	0/0:23,0:24:66.23:0,66,1158	0/0:23,0:23:66.23:0,66,1146	0/0:8,0:8:24.08:0,24,418	0/0:12,0:12:36.12:0,36,642	0/1:22,2:24:99:161,0,717	0/0:15,0:15:33.11:0,33,593	0/0:29,0:29:84.29:0,84,1471	0/0:33,0:33:99:0,99,1683	0/0:29,0:29:87.30:0,87,1514	0/0:15,0:16:15.88:0,16,608	0/0:25,0:25:63.13:0,63,1026	0/1:14,1:15:31.60:32,0,546	1/1:1,2:2:3.01:71,3,0
chr10	44896838	.	TAGCAGAAGA	T	3123.82	PASS	AB=0.889;AC=12;AF=0.222;AN=54;BaseQRankSum=5.285;DP=557;FS=34.683;HRun=0;HaplotypeScore=202.3812;InbreedingCoeff=0.7871;MQ=61.76;MQ0=1;MQRankSum=-7.538;QD=28.66;ReadPosRankSum=-1.819;VQSLOD=1.0935;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:16,4:20:7.17:744,0,7	0/0:20,0:20:51.07:0,51,1841	0/0:27,0:22:44.71:0,45,1170	0/0:23,0:22:9.51:0,10,1077	1/1:10,6:16:29.95:577,30,0	0/0:17,0:17:48.16:0,48,1929	0/0:21,0:21:45.11:0,45,1562	0/0:39,0:39:99:0,102,3542	0/0:23,0:23:63.19:0,63,2603	0/0:36,0:36:82.55:0,83,2307	0/0:19,0:19:21.81:0,22,910	0/0:12,0:12:33.10:0,33,1370	0/0:18,0:18:48.15:0,48,1990	0/0:13,0:13:39.12:0,39,1574	0/0:18,0:18:17.07:0,17,1083	0/0:28,0:28:56.17:0,56,1534	0/0:22,0:22:51.16:0,51,1919	0/0:11,0:11:24.55:0,25,724	1/1:13,1:14:21.07:449,21,0	1/1:14,2:16:23.89:363,24,0	1/1:16,1:17:30.03:599,30,0	0/0:24,0:24:57.14:0,57,1677	0/0:27,0:27:62.96:0,63,2344	0/0:27,0:27:75.17:0,75,3140	0/0:23,0:23:29.46:0,29,1665	0/1:16,1:17:73.26:445,0,73	1/1:9,0:9:14.90:124,15,0	./.
chr10	44896847	.	AAGC	A	1164.57	PASS	AB=0.944;AC=11;AF=0.204;AN=54;BaseQRankSum=9.549;DP=557;FS=39.786;HRun=0;HaplotypeScore=146.8511;InbreedingCoeff=0.6371;MQ=57.53;MQ0=3;MQRankSum=-6.584;QD=11.88;ReadPosRankSum=-2.634;VQSLOD=0.8524;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:17,2:19:5.71:281,0,6	0/0:20,0:20:51.08:0,51,1061	0/0:31,0:23:36.60:0,37,807	0/0:24,0:20:6.97:0,7,624	1/1:13,0:13:29.76:225,30,0	0/0:19,0:19:57.12:0,57,1106	0/0:21,0:21:60.04:0,60,1052	0/0:42,0:42:99:0,120,2233	0/0:25,0:25:71.01:0,71,1429	0/0:36,0:36:84.27:0,84,1523	0/0:18,0:18:28.45:0,28,599	0/0:12,0:12:36.11:0,36,784	0/0:17,0:17:51.15:0,51,1084	0/0:15,0:15:45.12:0,45,887	0/0:17,0:17:41.64:0,42,610	0/0:26,0:26:42.03:0,42,814	0/0:20,0:20:30.30:0,30,1054	0/0:13,0:13:25.67:0,26,419	0/1:12,0:12:28.27:114,0,28	1/1:17,0:17:5.67:152,6,0	1/1:14,1:15:26.33:266,26,0	0/0:23,0:23:37.19:0,37,1007	0/0:26,0:26:68.95:0,69,1322	0/0:29,0:29:84.10:0,84,1718	0/0:25,0:25:38.96:0,39,985	0/1:12,1:13:56.17:187,0,56	1/1:9,0:9:14.86:105,15,0	./.
chr10	44896886	.	GAGCAGA	G	3989.73	PASS	AB=0.946;AC=13;AF=0.232;AN=56;BaseQRankSum=3.006;DP=623;FS=4.037;HRun=0;HaplotypeScore=193.0086;InbreedingCoeff=0.5219;MQ=52.47;MQ0=11;MQRankSum=-4.665;QD=18.47;ReadPosRankSum=-0.018;VQSLOD=3.3136;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:26:11.28:0,11,668	1/1:4,14:18:20.76:392,21,0	0/1:32,0:13:2.48:2,0,240	0/0:33,0:18:8.92:0,9,203	0/0:26,0:25:43.54:0,44,646	0/0:29,0:29:63.17:0,63,1519	0/0:24,0:24:51.15:0,51,1322	0/0:25,0:24:36.06:0,36,620	0/0:26,0:26:63.19:0,63,1728	1/1:33,5:38:3.48:793,3,0	1/1:15,7:22:36.26:763,36,0	0/1:15,0:15:24.60:25,0,968	0/0:20,0:20:45.15:0,45,1351	0/0:20,0:20:51.16:0,51,1374	0/1:16,1:17:0.40:294,0,0	0/1:23,2:25:15.08:462,0,15	0/0:24,0:24:66.06:0,66,1686	0/1:9,2:12:19.55:227,0,20	0/0:14,0:12:23.10:0,23,545	0/0:21,0:20:33.06:0,33,577	0/0:19,0:19:42.05:0,42,832	0/0:17,0:17:30.08:0,30,656	0/0:17,0:17:36.11:0,36,898	0/0:34,0:34:81.06:0,81,2063	1/1:26,11:37:65.10:1032,65,0	0/0:12,0:12:27.06:0,27,638	0/0:17,0:17:42.10:0,42,864	0/0:2,0:2:5.93:0,6,56
chr10	44896990	.	G	GGCAGAAAAGCAGAA	5518.45	PASS	AB=1.000;AC=14;AF=0.259;AN=54;BaseQRankSum=4.402;DP=533;FS=5.266;HRun=0;HaplotypeScore=241.4953;InbreedingCoeff=0.7873;MQ=59.91;MQ0=1;MQRankSum=-9.497;QD=35.15;ReadPosRankSum=-0.884;VQSLOD=3.7223;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:43,0:43:10.43:1373,10,0	0/0:9,0:9:23.99:0,24,638	0/0:15,0:14:26.90:0,27,580	0/0:21,0:19:42.73:0,43,928	1/1:19,0:21:36.06:1047,36,0	0/0:16,0:16:42.13:0,42,1385	0/0:31,0:31:39.06:0,39,2537	0/0:28,0:28:58.96:0,59,1138	0/0:28,0:28:78.24:0,78,2497	0/0:28,0:28:72.24:0,72,2469	0/0:16,0:16:20.79:0,21,541	0/0:17,0:17:48.15:0,48,1369	0/0:16,0:16:48.16:0,48,1364	0/0:14,0:14:36.11:0,36,1037	0/0:15,0:15:29.44:0,29,923	0/0:20,0:20:46.95:0,47,1453	0/1:31,0:31:28.09:28,0,2741	0/0:13,0:13:11.63:0,12,819	1/1:10,1:10:18.04:507,18,0	1/1:10,0:10:17.95:377,18,0	0/1:10,0:10:17.67:219,0,18	0/0:24,0:24:51.17:0,51,1686	0/0:14,0:14:21.07:0,21,718	0/0:37,0:36:93.75:0,94,2916	0/0:14,0:14:16.87:0,17,619	1/1:5,12:19:36.12:1201,36,0	1/1:12,0:12:27.07:767,27,0	./.
chr10	44897017	.	A	AAGC	893.34	PASS	AB=0.890;AC=9;AF=0.167;AN=54;BaseQRankSum=7.338;DP=477;FS=8.326;HRun=0;HaplotypeScore=119.3965;InbreedingCoeff=-0.1751;MQ=60.53;MQ0=1;MQRankSum=-5.624;QD=7.32;ReadPosRankSum=-3.002;VQSLOD=1.5657;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:21,1:22:2.87:3,0,893	0/0:13,0:13:21.07:0,21,345	0/1:22,0:15:2.13:2,0,411	0/1:19,0:18:2.81:3,0,487	0/1:8,5:13:99:299,0,223	0/0:16,0:16:48.13:0,48,784	0/0:28,0:28:81.27:0,81,1338	0/0:25,0:24:66.14:0,66,1057	0/0:27,0:27:81.25:0,81,1324	0/0:30,0:29:40.87:0,41,1289	0/0:9,0:9:21.07:0,21,358	0/0:16,0:16:48.16:0,48,818	0/0:18,0:18:54.18:0,54,914	0/0:15,0:15:45.15:0,45,740	0/0:13,0:13:30.10:0,30,509	0/0:18,0:18:45.15:0,45,766	0/0:34,0:34:99:0,99,1619	0/1:10,0:10:56.10:56,0,353	0/0:12,0:9:9.75:0,10,197	0/1:4,1:5:55.98:56,0,141	0/1:5,1:8:37:169,0,37	0/0:19,0:19:54.17:0,54,892	0/0:14,0:14:42.12:0,42,663	0/0:35,0:35:99:0,99,1646	0/0:13,0:13:27.09:0,27,433	0/1:13,0:13:99:173,0,228	0/1:7,3:10:35.98:259,0,36	./.
chr10	44897047	.	G	GGCAGAA	6526.84	PASS	AC=30;AF=0.556;AN=54;BaseQRankSum=2.679;DP=530;FS=3.828;HRun=0;HaplotypeScore=131.2519;InbreedingCoeff=0.9159;MQ=62.38;MQ0=0;MQRankSum=-10.685;QD=27.54;ReadPosRankSum=-4.500;VQSLOD=3.8977;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:31:5.83:452,6,0	1/1:1,9:11:21.07:702,21,0	0/0:25,0:20:12.53:0,13,480	0/0:17,0:17:22.69:0,23,271	1/1:13,0:13:8.86:60,9,0	0/0:17,0:17:42.11:0,42,824	0/0:24,0:24:36.10:0,36,677	1/1:23,0:23:51.08:803,51,0	0/0:25,0:25:60.18:0,60,1211	1/1:21,8:28:48.12:1191,48,0	1/1:1,11:16:20.93:516,21,0	0/0:21,0:21:48.13:0,48,918	0/0:23,0:23:63.15:0,63,1157	0/0:21,0:21:57.13:0,57,1030	1/1:3,9:13:18.06:601,18,0	1/1:7,10:18:15:420,15,0	0/0:28,0:28:46.79:0,47,1255	1/1:7,1:8:8.99:221,9,0	1/1:5,3:15:24:330,24,0	1/1:6,0:6:11.78:116,12,0	1/1:9,0:9:8.95:68,9,0	0/0:24,0:24:51.16:0,51,1054	0/0:29,0:29:75.08:0,75,1352	0/0:39,0:39:99:0,102,1875	1/1:1,11:13:18.06:602,18,0	1/1:12,0:13:13.05:366,13,0	1/1:1,1:19:3.01:79,3,0	./.
chr10	44897062	.	AGGAGCAGG	A	873.17	PASS	AB=0.978;AC=10;AF=0.179;AN=56;BaseQRankSum=5.060;DP=554;FS=0.592;HRun=0;HaplotypeScore=163.3935;InbreedingCoeff=-0.0644;MQ=67.11;MQ0=0;MQRankSum=-6.650;QD=5.67;ReadPosRankSum=-3.895;VQSLOD=0.7237;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:35,0:35:99:337,0,795	0/0:10,0:10:25.33:0,25,736	0/0:18,0:16:38.56:0,39,1393	0/0:18,0:19:56.73:0,57,1384	0/0:15,0:15:13.10:0,13,793	0/0:24,0:24:69.22:0,69,2559	0/0:22,0:22:63.19:0,63,2139	0/1:19,5:24:99:397,0,1078	0/0:22,0:22:63.19:0,63,2513	0/1:25,0:24:89.13:89,0,1567	0/1:20,0:20:69.72:70,0,812	0/0:21,0:21:63.20:0,63,2441	0/0:23,0:23:69.21:0,69,2754	0/0:23,0:23:69.21:0,69,2692	0/0:12,0:12:20.92:0,21,708	0/1:13,0:13:1.18:1,0,461	0/0:27,0:27:75.22:0,75,2764	0/0:10,0:10:24.08:0,24,753	0/1:13,0:13:11.40:11,0,710	0/1:10,0:10:59.03:59,0,316	0/0:12,0:12:14.83:0,15,691	0/0:23,0:23:63.20:0,63,2508	0/0:36,0:36:99:0,108,4223	0/0:40,0:40:99:0,104,4262	0/1:13,0:13:36.50:37,0,611	0/0:23,0:23:59.99:0,60,1793	0/0:20,0:20:9.03:0,9,272	1/1:1,0:1:1.55:4,2,0
chr10	44897070	.	GGA	G	338.69	PASS	AB=0.991;AC=10;AF=0.179;AN=56;BaseQRankSum=7.496;DP=542;FS=3.499;HRun=0;HaplotypeScore=102.8943;InbreedingCoeff=-0.0433;MQ=70.45;MQ0=0;MQRankSum=-5.870;QD=2.09;ReadPosRankSum=-3.403;VQSLOD=1.3248;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:32,0:32:99:131,0,670	0/0:9,0:9:22.82:0,23,414	0/0:18,1:19:8.36:0,8,1015	0/0:18,0:18:51.16:0,51,938	0/0:18,0:18:42.01:0,42,694	0/0:24,1:25:30.33:0,30,1365	0/0:22,0:22:66.20:0,66,1267	0/1:19,0:19:99:172,0,795	0/0:21,0:21:63.22:0,63,1278	0/1:22,2:25:48.33:48,0,1057	0/1:23,0:23:29.13:29,0,630	0/0:21,0:21:63.22:0,63,1274	0/0:22,0:22:66.23:0,66,1317	0/0:23,0:23:69.24:0,69,1400	0/0:12,0:12:20.90:0,21,359	0/0:11,0:11:14.60:0,15,266	0/0:25,0:25:72.20:0,72,1419	0/0:8,0:8:24.08:0,24,465	0/0:14,0:14:36.12:0,36,711	0/1:11,0:11:19.25:19,0,242	0/1:13,0:13:23.82:24,0,399	0/0:22,0:22:63.22:0,63,1278	0/0:36,0:36:99:0,108,2193	0/0:35,1:36:59.80:0,60,2045	0/1:11,0:11:5.08:5,0,349	0/1:27,0:27:21.60:22,0,1194	0/0:18,0:18:9.03:0,9,175	1/1:1,0:1:3:28,3,0
chr10	44897087	.	A	AG	37.35	PASS	AB=0.897;AC=4;AF=0.071;AN=56;BaseQRankSum=4.087;DP=524;FS=8.361;HRun=0;HaplotypeScore=90.2846;InbreedingCoeff=0.3149;MQ=71.19;MQ0=0;MQRankSum=-3.292;QD=0.93;ReadPosRankSum=0.619;VQSLOD=1.1835;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:23,4:27:76.30:76,0,702	0/0:8,0:8:24.08:0,24,332	0/0:15,0:15:42.12:0,42,533	0/0:19,0:19:44.27:0,44,616	0/0:16,0:17:45.06:0,45,601	0/0:29,0:29:87.27:0,87,1198	0/0:26,0:26:71.88:0,72,1006	0/0:15,0:15:42.14:0,42,587	0/0:23,0:23:69.22:0,69,946	0/0:22,0:22:60.20:0,60,830	0/0:23,0:23:45.08:0,45,602	0/0:18,0:18:54.18:0,54,754	0/0:22,0:22:66.18:0,66,872	0/0:21,0:21:63.21:0,63,880	0/0:14,0:14:24.04:0,24,312	0/0:13,0:13:20.97:0,21,269	0/0:22,0:22:66.09:0,66,876	0/0:8,0:8:24.08:0,24,334	0/0:14,0:14:33.97:0,34,430	0/0:12,0:11:27.02:0,27,351	0/1:11,1:12:14.56:15,0,361	0/0:21,0:21:60.20:0,60,837	0/0:35,0:35:99:0,102,1387	0/0:36,0:36:99:0,102,1346	0/0:8,0:8:18.06:0,18,251	0/0:23,0:23:67.11:0,67,921	0/0:19,0:19:14.98:0,15,182	1/1:0,1:1:3.01:48,3,0
chr10	44897160	.	GAAGAAGAA	G	235.56	PASS	AB=0.905;AC=8;AF=0.148;AN=54;BaseQRankSum=5.067;DP=489;FS=2.437;HRun=0;HaplotypeScore=155.7573;InbreedingCoeff=-0.1812;MQ=61.47;MQ0=11;MQRankSum=-2.660;QD=1.76;ReadPosRankSum=-2.003;VQSLOD=2.4531;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:13.53:0,14,399	0/0:16,0:16:24.91:0,25,699	0/1:28,0:19:26.42:26,0,541	0/0:22,0:10:30.10:0,30,714	0/1:8,0:5:11.93:12,0,42	0/0:26,0:26:72.18:0,72,2227	0/0:22,0:22:63.21:0,63,1706	0/0:19,0:17:11.32:0,11,675	0/0:34,0:34:99:0,102,3064	0/1:25,1:26:99:153,0,887	0/1:15,7:21:25.05:25,0,663	0/0:15,0:15:42.13:0,42,1384	0/0:20,0:20:60.21:0,60,1828	0/0:15,0:15:42.13:0,42,1272	0/1:10,4:14:46.12:46,0,469	0/1:11,3:14:51.29:51,0,418	0/0:20,0:20:19.32:0,19,818	0/0:8,0:8:14.15:0,14,319	0/1:10,0:7:41.46:41,0,71	0/0:18,0:16:13.80:0,14,278	0/0:9,0:9:8.20:0,8,124	0/0:18,0:18:54.18:0,54,1777	0/0:20,0:20:54.19:0,54,1774	0/0:35,0:35:97.64:0,98,3074	0/0:8,0:8:24.08:0,24,409	0/1:10,0:10:12.94:13,0,231	0/0:6,0:6:12.02:0,12,124	./.
chr10	44897174	.	GAAGCAC	G	1952.90	PASS	AB=0.696;AC=12;AF=0.222;AN=54;BaseQRankSum=6.335;DP=499;FS=10.070;HRun=0;HaplotypeScore=142.0438;InbreedingCoeff=0.7734;MQ=76.86;MQ0=8;MQRankSum=-8.938;QD=29.15;ReadPosRankSum=-0.826;VQSLOD=2.8138;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:8,10:18:0.55:652,0,1	0/0:17,0:17:9.47:0,9,1023	0/0:39,0:32:62.88:0,63,1618	0/0:20,0:16:42.40:0,42,1114	1/1:2,4:4:6.02:131,6,0	0/0:22,0:22:51.18:0,51,1731	0/0:22,0:22:57.13:0,57,1615	0/0:24,0:22:34.06:0,34,1308	0/0:34,0:34:81.28:0,81,2719	0/0:28,0:28:49.54:0,50,1503	0/0:26,0:26:54.07:0,54,1195	0/0:14,0:14:42.14:0,42,1292	0/0:23,0:23:66.23:0,66,2112	0/0:17,0:17:51.16:0,51,1558	0/0:15,0:15:36.12:0,36,847	0/0:17,0:17:42.01:0,42,884	0/0:20,0:20:48.08:0,48,1391	0/0:7,0:7:21.07:0,21,419	1/1:8,3:8:9.03:196,9,0	1/1:5,6:11:27.02:468,27,0	1/1:2,5:8:12.04:254,12,0	0/0:20,0:20:48.16:0,48,1523	0/0:21,0:21:57.20:0,57,1855	0/0:37,0:37:97.53:0,98,2892	0/0:9,0:9:27.09:0,27,620	0/1:6,3:9:99:219,0,172	1/1:1,3:4:9.03:198,9,0	./.
chr10	44897218	.	G	GGCAGAA	2926.96	PASS	AB=0.813;AC=15;AF=0.268;AN=56;BaseQRankSum=9.054;DP=533;FS=0.487;HRun=0;HaplotypeScore=140.5907;InbreedingCoeff=0.8717;MQ=54.89;MQ0=1;MQRankSum=-8.296;QD=26.85;ReadPosRankSum=-5.922;VQSLOD=2.3559;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:28,2:30:50.49:717,50,0	0/0:14,0:15:9.03:0,9,191	0/0:25,0:18:29.11:0,29,403	0/0:16,0:13:21.06:0,21,391	1/1:15,1:15:29.67:326,30,0	0/0:22,0:22:45.13:0,45,839	0/0:17,0:16:36.10:0,36,642	0/0:14,0:14:30.07:0,30,544	0/0:37,0:37:93.27:0,93,1754	0/0:28,0:28:45.14:0,45,860	0/0:28,0:28:57.17:0,57,1061	0/0:23,0:23:63.19:0,63,1199	0/0:26,0:26:48.14:0,48,934	0/0:17,0:17:42.13:0,42,841	0/0:17,0:17:33.11:0,33,705	0/0:17,0:17:45.15:0,45,897	0/0:28,0:28:63.21:0,63,1198	0/0:10,0:10:17.99:0,18,301	1/1:11,0:11:15.03:202,15,0	1/1:13,3:16:38.99:737,39,0	1/1:11,1:12:18:267,18,0	0/0:15,0:15:39.09:0,39,690	0/0:23,0:23:45.05:0,45,746	0/0:31,0:31:78.18:0,78,1447	0/0:15,0:15:33.06:0,33,591	0/1:10,3:13:95.08:597,0,95	1/1:9,0:9:17.98:197,18,0	1/1:2,0:2:6.02:80,6,0
chr10	44897253	.	AAGG	A	5260.48	PASS	AB=0.618;AC=17;AF=0.304;AN=56;BaseQRankSum=10.416;DP=594;FS=10.014;HRun=0;HaplotypeScore=114.4972;InbreedingCoeff=0.9229;MQ=59.84;MQ0=5;MQRankSum=-8.076;QD=34.16;ReadPosRankSum=0.152;VQSLOD=5.3411;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:15,23:38:59.05:1102,59,0	1/1:0,5:5:15.05:226,15,0	0/0:31,0:15:22.42:0,22,468	0/0:35,0:19:27.16:0,27,398	1/1:2,26:28:78.21:1127,78,0	0/0:26,0:26:71.90:0,72,1387	0/0:17,0:17:45.13:0,45,858	0/0:12,0:11:18.05:0,18,334	0/0:31,0:31:71.57:0,72,1347	0/0:30,0:30:69.16:0,69,1350	0/0:23,0:23:51.07:0,51,922	0/0:21,0:21:54.19:0,54,1134	0/0:22,0:22:60.17:0,60,1106	0/0:21,0:21:45.15:0,45,885	0/0:18,0:18:45.08:0,45,864	0/0:17,0:17:45.06:0,45,790	0/0:33,0:33:79.77:0,80,1777	0/0:7,0:7:14.54:0,15,269	1/1:6,2:8:18.03:228,18,0	1/1:6,12:18:42.10:607,42,0	1/1:9,10:19:27.79:568,28,0	0/0:22,0:22:63.17:0,63,1128	0/0:18,0:18:45.12:0,45,851	0/0:29,0:29:60.15:0,60,1132	0/0:23,0:23:66.21:0,66,1287	0/1:8,13:21:2.02:683,0,2	1/1:6,9:15:45.13:630,45,0	1/1:0,2:2:6.02:90,6,0
chr10	44897346	.	GAGA	G	941.83	PASS	AB=0.887;AC=7;AF=0.125;AN=56;BaseQRankSum=6.609;DP=605;FS=5.084;HRun=0;HaplotypeScore=124.4941;InbreedingCoeff=-0.1436;MQ=57.94;MQ0=14;MQRankSum=-6.733;QD=6.45;ReadPosRankSum=-2.208;VQSLOD=1.9640;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:27,1:28:81.67:82,0,833	0/0:8,0:8:24.08:0,24,550	0/0:22,0:9:18.94:0,19,129	0/0:22,0:11:18.01:0,18,311	0/1:25,7:30:99:240,0,868	0/0:28,0:28:81.21:0,81,1719	0/0:16,0:15:45.14:0,45,921	0/0:30,0:29:66.21:0,66,1399	0/0:33,0:33:99:0,99,2233	0/0:30,0:30:78.19:0,78,1527	0/0:16,0:16:45.15:0,45,1015	0/0:26,0:26:75.19:0,75,1558	0/0:19,0:19:54.17:0,54,1189	0/0:22,0:22:63.19:0,63,1288	0/0:20,0:20:57.16:0,57,1179	0/0:17,0:17:51.18:0,51,1133	0/0:31,0:31:62.31:0,62,1835	0/0:10,0:10:29.79:0,30,574	0/1:18,1:18:43.67:44,0,700	0/1:21,5:26:99:247,0,830	0/0:23,0:21:30.10:0,30,579	0/0:20,0:20:57.20:0,57,1283	0/0:20,0:20:57.18:0,57,1236	0/0:28,0:28:75.13:0,75,1561	0/0:17,0:16:45.15:0,45,1035	0/1:15,8:22:99:348,0,544	0/1:14,2:15:70.15:70,0,526	0/1:2,0:2:41.39:41,0,43
chr10	44897427	.	A	AGAG	3980.57	PASS	AB=0.906;AC=15;AF=0.268;AN=56;BaseQRankSum=10.397;DP=607;FS=21.564;HRun=0;HaplotypeScore=131.7553;InbreedingCoeff=0.7484;MQ=52.29;MQ0=26;MQRankSum=-11.046;QD=20.95;ReadPosRankSum=0.340;VQSLOD=1.9069;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:23,6:28:20.36:523,0,20	0/0:9,0:8:21.07:0,21,311	0/1:42,0:3:0:0,0,0	0/0:43,0:14:4.21:0,4,145	1/1:10,7:17:13.67:433,14,0	0/0:30,0:30:78.24:0,78,1150	0/0:24,0:23:66.17:0,66,978	0/0:24,0:21:50.90:0,51,665	0/0:29,0:29:84.27:0,84,1247	0/0:28,0:28:84.22:0,84,1222	0/0:22,0:21:54.17:0,54,784	0/0:20,0:20:48.15:0,48,717	0/0:22,0:22:60.20:0,60,900	0/0:23,0:23:57.15:0,57,829	0/0:23,0:23:54.16:0,54,793	0/0:14,0:14:30.10:0,30,463	0/0:13,0:13:21.44:0,21,375	0/0:5,0:5:9.03:0,9,139	0/1:21,3:19:40.89:341,0,41	1/1:8,4:12:36.10:608,36,0	1/1:16,3:19:29.60:385,30,0	0/0:17,0:17:51.17:0,51,785	0/0:25,0:24:63.19:0,63,929	0/0:22,0:22:57.08:0,57,769	0/0:23,0:21:57.16:0,57,798	1/1:15,9:24:33.16:746,33,0	1/1:10,8:18:45.09:708,45,0	1/1:2,3:5:15:236,15,0
chr10	44897436	.	AGAG	A	2579.60	PASS	AB=1.000;AC=20;AF=0.370;AN=54;BaseQRankSum=9.907;DP=594;FS=15.219;HRun=0;HaplotypeScore=134.5613;InbreedingCoeff=0.0091;MQ=52.90;MQ0=25;MQRankSum=-2.102;QD=8.43;ReadPosRankSum=-3.110;VQSLOD=1.8877;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:25:57.52:58,0,66	1/1:2,6:7:18.06:265,18,0	./.	0/0:36,0:15:10.25:0,10,123	0/1:17,0:17:99:115,0,101	0/0:28,0:28:57.17:0,57,1079	0/0:25,0:23:48.16:0,48,959	1/1:10,22:30:59.01:771,59,0	0/0:31,0:31:78.25:0,78,1527	1/1:29,0:29:0.89:266,1,0	0/1:24,0:23:30.88:205,0,31	0/0:16,0:16:39.12:0,39,760	0/0:23,0:23:63.10:0,63,1072	0/0:19,0:19:48.16:0,48,932	0/1:24,0:24:30.35:218,0,30	0/1:13,0:13:21.29:148,0,21	0/0:11,0:11:24.06:0,24,423	1/1:4,0:4:8.95:68,9,0	0/1:24,0:19:85.87:127,0,86	0/1:12,0:12:10.90:11,0,98	0/1:19,0:19:11.58:12,0,23	0/0:20,0:19:51.15:0,51,951	0/0:26,0:25:63.21:0,63,1246	0/0:21,0:21:45.13:0,45,827	0/1:23,0:21:7.30:233,0,7	0/1:22,0:22:99:118,0,263	0/1:20,0:20:99:109,0,217	0/1:9,0:9:28.64:29,0,93
chr10	44897442	.	G	GGAA	3721.09	PASS	AB=0.872;AC=13;AF=0.232;AN=56;BaseQRankSum=10.453;DP=558;FS=46.054;HRun=0;HaplotypeScore=129.0021;InbreedingCoeff=0.7069;MQ=53.25;MQ0=19;MQRankSum=-11.401;QD=25.84;ReadPosRankSum=-0.138;VQSLOD=1.5773;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:22,1:22:41.99:278,0,42	0/0:8,0:7:17.98:0,18,150	0/0:22,0:3:6.01:0,6,58	0/0:32,0:13:24.03:0,24,303	1/1:10,6:16:22.83:625,23,0	0/0:25,0:25:75.15:0,75,1081	0/0:24,0:22:63.10:0,63,934	0/0:32,0:31:83.58:0,84,700	0/0:33,0:33:96.21:0,96,1436	0/0:25,0:25:69.20:0,69,998	0/0:24,0:23:54.03:0,54,690	0/0:16,0:16:48.10:0,48,730	0/0:22,0:22:66.15:0,66,979	0/0:19,0:19:54.16:0,54,866	0/0:22,0:22:48.16:0,48,732	0/0:13,0:13:33.11:0,33,502	0/0:11,0:11:24.54:0,25,373	0/0:5,0:5:9.03:0,9,130	1/1:25,1:21:16.23:477,16,0	0/1:9,3:12:2.32:289,0,2	0/1:15,3:18:36.28:178,0,36	0/0:21,0:20:57.13:0,57,880	0/0:24,0:23:69.21:0,69,1119	0/0:17,0:17:45.14:0,45,721	0/0:19,0:17:48.13:0,48,670	1/1:14,8:22:56.99:956,57,0	1/1:13,7:20:34.18:633,34,0	1/1:4,3:7:15.05:285,15,0
chr10	44897448	.	GGAGGAA	G	2725.04	PASS	AB=0.808;AC=8;AF=0.143;AN=56;BaseQRankSum=4.703;DP=544;FS=40.318;HRun=0;HaplotypeScore=154.0010;InbreedingCoeff=-0.1565;MQ=53.52;MQ0=12;MQRankSum=-6.892;QD=19.19;ReadPosRankSum=-2.633;VQSLOD=1.2875;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:20,4:23:69.33:369,0,69	0/0:8,0:7:20.76:0,21,137	0/0:18,0:4:12.04:0,12,185	0/0:24,0:13:8.36:0,8,384	0/1:12,4:16:99:527,0,140	0/0:24,0:24:69.16:0,69,1884	0/0:23,0:21:60.16:0,60,1716	0/0:33,0:32:33.66:0,34,791	0/0:34,0:34:90.27:0,90,2701	0/0:22,0:22:33.04:0,33,365	0/0:22,0:22:44.50:0,44,322	0/0:17,0:17:51.14:0,51,1383	0/0:24,0:24:69.14:0,69,1857	0/0:17,0:17:51.18:0,51,1665	0/0:25,0:25:32.38:0,32,296	0/0:13,0:13:31.91:0,32,219	0/0:9,0:9:27.02:0,27,665	0/0:5,0:5:8.71:0,9,49	0/1:7,16:19:94.56:535,0,95	0/1:12,1:13:71.34:159,0,71	0/1:15,1:16:11.22:204,0,11	0/0:21,0:20:57.16:0,57,1587	0/0:25,0:24:69.21:0,69,2162	0/0:20,0:20:60.08:0,60,1490	0/0:18,0:17:43.73:0,44,263	0/1:11,10:21:99:551,0,172	0/1:11,11:22:99:400,0,157	0/1:7,0:7:65.97:116,0,66
chr10	44897451	.	GGAA	G	4456.18	PASS	AB=1.000;AC=24;AF=0.429;AN=56;BaseQRankSum=8.919;DP=532;FS=20.287;HRun=0;HaplotypeScore=118.0863;InbreedingCoeff=0.3282;MQ=54.36;MQ0=8;MQRankSum=-2.482;QD=15.31;ReadPosRankSum=1.975;VQSLOD=3.0863;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:27:59.65:148,0,60	1/1:8,0:7:0.67:94,1,0	0/0:13,0:4:12.04:0,12,165	0/0:19,0:13:19.23:0,19,263	0/1:18,0:18:25.24:175,0,25	0/0:24,0:24:69.13:0,69,1209	0/0:21,0:20:57.15:0,57,1027	0/1:33,0:32:99:184,0,224	0/0:30,0:30:87.25:0,87,1677	1/1:2,20:22:60.18:861,60,0	1/1:5,17:22:39.06:550,39,0	0/0:17,0:17:48.11:0,48,834	0/0:23,0:23:60.18:0,60,1132	0/0:18,0:18:51.15:0,51,1002	1/1:3,23:26:42.06:615,42,0	1/1:2,11:13:27.09:414,27,0	0/0:10,0:11:29.98:0,30,429	1/1:0,5:5:9.03:138,9,0	0/1:23,0:19:22.86:209,0,23	0/1:12,0:12:23.75:56,0,24	1/1:14,0:14:0.44:67,0,0	0/0:21,0:20:54.15:0,54,987	0/0:23,0:23:66.21:0,66,1331	0/0:21,0:21:57.08:0,57,941	1/1:3,15:17:39.13:597,39,0	0/1:21,0:21:75.44:169,0,75	0/1:21,0:21:68.63:143,0,69	0/1:7,0:7:35.66:37,0,36
chr10	44897717	.	C	CA	71.80	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-3.448;DP=556;FS=2.031;HRun=5;HaplotypeScore=96.1981;InbreedingCoeff=0.8799;MQ=56.97;MQ0=8;MQRankSum=0.365;QD=10.26;ReadPosRankSum=0.805;VQSLOD=1.1054;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:81.66:0,82,847	1/1:2,5:7:12.04:158,12,0	0/0:12,0:6:12.02:0,12,118	0/0:10,0:4:8.97:0,9,81	0/0:24,0:24:57.10:0,57,581	0/0:31,0:31:90.04:0,90,940	0/0:14,0:14:36.09:0,36,385	0/0:32,0:31:78.18:0,78,825	0/0:16,0:16:39.10:0,39,419	0/0:33,0:33:93.22:0,93,992	0/0:26,0:26:72.18:0,72,774	0/0:13,0:13:33.08:0,33,354	0/0:15,0:15:45.11:0,45,483	0/0:20,0:20:54.13:0,54,579	0/0:13,0:13:36.09:0,36,387	0/0:14,0:14:39.10:0,39,419	0/0:21,0:21:54.11:0,54,569	0/0:12,0:12:36.07:0,36,377	0/0:15,0:13:27.05:0,27,277	0/0:37,0:37:99:0,99,1017	0/0:13,0:13:36.08:0,36,376	0/0:23,0:23:54.13:0,54,580	0/0:33,0:33:87.21:0,87,934	0/0:9,0:9:24.05:0,24,251	0/0:21,0:21:57.09:0,57,587	0/0:27,0:26:72.16:0,72,753	0/0:28,0:27:69.15:0,69,720	0/0:7,0:7:21.05:0,21,218
chr10	44898268	.	CA	C	5495.83	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=6.593;DP=556;FS=3.665;HRun=2;HaplotypeScore=66.4614;InbreedingCoeff=0.9993;MQ=63.12;MQ0=0;MQRankSum=-1.062;QD=33.72;ReadPosRankSum=2.637;VQSLOD=5.2587;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,18:17:48.16:622,48,0	0/0:13,0:13:39.12:0,39,565	0/0:23,0:14:36.08:0,36,514	0/0:25,0:20:56.98:0,57,796	1/1:1,18:19:45.15:584,45,0	0/0:23,0:23:66.21:0,66,969	0/0:20,0:20:60.19:0,60,878	0/0:24,0:24:44.57:0,45,984	0/0:18,0:18:54.18:0,54,809	0/0:34,0:34:99:0,102,1529	0/0:19,0:19:57.19:0,57,854	0/0:10,0:10:30.09:0,30,428	0/0:11,0:11:30.09:0,30,429	0/0:17,0:17:51.17:0,51,763	0/0:12,0:12:36.12:0,36,539	0/0:11,0:11:33.11:0,33,494	0/0:28,0:28:78.26:0,78,1166	0/0:19,0:19:54.12:0,54,762	1/1:0,23:21:60.18:766,60,0	1/1:0,23:23:66.21:856,66,0	1/1:0,22:22:51.17:662,51,0	0/0:26,0:26:75.25:0,75,1124	0/0:21,0:21:63.21:0,63,944	0/0:23,0:23:66.22:0,66,988	0/0:16,0:16:41.69:0,42,570	1/1:1,23:23:24.24:799,24,0	1/1:1,23:24:63.20:818,63,0	1/1:0,10:10:30.10:389,30,0
chr10	44898804	.	CA	C	6605.70	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=15.227;DP=549;FS=3.012;HRun=1;HaplotypeScore=107.3742;InbreedingCoeff=0.9847;MQ=62.29;MQ0=1;MQRankSum=1.392;QD=40.03;ReadPosRankSum=2.417;VQSLOD=4.9575;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,13:14:8.52:463,9,0	0/0:6,0:6:17.66:0,18,116	0/0:23,0:17:51.14:0,51,731	0/0:23,0:22:66.14:0,66,970	1/1:0,24:24:72.24:994,72,0	0/0:20,0:20:60.20:0,60,959	0/0:11,0:10:30.09:0,30,456	0/0:30,0:30:49.90:0,50,506	0/0:20,0:20:60.20:0,60,959	0/0:22,0:21:55.20:0,55,339	0/0:25,0:25:51.58:0,52,419	0/0:15,0:15:45.14:0,45,693	0/0:13,0:13:39.11:0,39,577	0/0:20,0:20:60.19:0,60,933	0/0:19,0:19:51.62:0,52,329	0/0:9,0:9:26.39:0,26,165	0/0:27,0:27:81.25:0,81,1256	0/0:16,0:16:47.35:0,47,343	1/1:2,6:5:15.05:209,15,0	1/1:0,33:33:99:1381,99,0	1/1:0,19:19:54.18:754,54,0	0/0:23,0:23:69.24:0,69,1100	0/0:28,0:28:84.26:0,84,1296	0/0:20,0:20:60.20:0,60,957	0/0:14,0:14:41.14:0,41,264	1/1:0,24:24:72.24:1005,72,0	1/1:0,28:28:84.28:1171,84,0	1/1:0,15:15:45.15:628,45,0
chr10	44901205	.	ACT	A	83.81	PASS	AC=2;AF=0.077;AN=26;BaseQRankSum=-0.950;DP=766;FS=2.005;HRun=0;HaplotypeScore=26.1078;InbreedingCoeff=0.4934;MQ=10.57;MQ0=597;MQRankSum=-1.372;QD=8.38;ReadPosRankSum=1.161;VQSLOD=2.8011;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	1/1:6,4:5:12.04:164,12,0	./.	./.	0/0:20,0:3:3.01:0,3,53	0/0:27,0:6:12.04:0,12,212	./.	./.	0/0:23,0:2:0:0,0,0	0/0:29,0:9:27.09:0,27,464	0/0:51,0:9:18.06:0,18,318	0/0:25,0:3:6.02:0,6,106	0/0:23,0:3:9.03:0,9,159	./.	./.	0/0:9,0:1:3.01:0,3,53	./.	./.	./.	0/0:95,0:2:3.01:0,3,53	./.	0/0:35,0:21:42.14:0,42,738	0/0:35,0:12:30.10:0,30,529	./.	0/0:25,0:6:12.04:0,12,212	./.	./.	./.
chr10	44901776	.	TC	T	72.42	PASS	AC=2;AF=0.053;AN=38;BaseQRankSum=1.716;DP=411;FS=4.899;HRun=2;HaplotypeScore=20.5205;InbreedingCoeff=0.4866;MQ=24.93;MQ0=69;MQRankSum=-1.815;QD=4.02;ReadPosRankSum=0.271;VQSLOD=0.4685;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:8:9.03:0,9,135	0/0:3,0:1:3.01:0,3,45	./.	./.	0/0:7,0:2:6.02:0,6,90	0/0:32,0:19:33.09:0,33,493	./.	1/1:10,8:4:12.04:156,12,0	0/0:13,0:11:15.05:0,15,224	0/0:10,0:4:12.04:0,12,180	0/0:17,0:8:24.08:0,24,359	0/0:18,0:14:12.04:0,12,179	0/0:19,0:13:21.07:0,21,314	0/0:23,0:19:27.09:0,27,404	./.	./.	0/0:24,0:19:24.08:0,24,359	./.	0/0:13,0:1:3.01:0,3,45	./.	./.	0/0:25,0:18:33.11:0,33,494	0/0:27,0:20:39.13:0,39,583	0/0:24,0:14:21.07:0,21,315	0/0:11,0:6:15.05:0,15,224	0/0:9,0:3:6.02:0,6,90	0/0:19,0:5:6.02:0,6,90	./.
chr10	44903931	.	T	TA	7880.73	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=3.708;DP=470;FS=0.765;HRun=7;HaplotypeScore=55.8475;InbreedingCoeff=0.9941;MQ=57.95;MQ0=0;MQRankSum=0.458;QD=30.78;ReadPosRankSum=2.440;VQSLOD=5.1867;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,25:27:60.18:725,60,0	1/1:1,8:9:20.99:222,21,0	0/0:20,0:14:38.90:0,39,359	0/0:8,0:8:18:0,18,165	1/1:1,19:20:54.17:652,54,0	0/0:23,0:23:66.11:0,66,637	0/0:15,0:15:36.06:0,36,348	0/0:23,0:23:63.09:0,63,604	0/0:23,0:23:60.08:0,60,574	1/1:3,24:27:72.22:870,72,0	1/1:1,13:14:39.12:471,39,0	0/0:10,0:10:30.05:0,30,290	0/0:16,0:16:48.08:0,48,464	0/0:19,0:19:51.08:0,51,492	1/1:0,22:22:66.20:797,66,0	1/1:0,5:5:15.05:181,15,0	0/0:21,0:21:60.09:0,60,579	1/1:3,12:15:33.10:399,33,0	1/1:3,14:15:39.11:460,39,0	1/1:1,20:21:60.18:725,60,0	1/1:2,19:21:48.15:580,48,0	0/0:8,0:8:21.03:0,21,203	0/0:11,0:11:30.01:0,30,290	0/0:17,0:17:51.08:0,51,493	1/1:0,9:9:27.08:326,27,0	1/1:2,15:17:45.12:531,45,0	1/1:1,20:21:60.18:725,60,0	1/1:5,6:11:18.06:217,18,0
chr10	44904467	.	TG	T	325.24	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=0.592;DP=661;FS=9.478;HRun=1;HaplotypeScore=91.5961;InbreedingCoeff=0.9942;MQ=69.73;MQ0=1;MQRankSum=0.676;QD=29.57;ReadPosRankSum=0.722;VQSLOD=2.3998;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:81.28:0,81,1293	1/1:0,11:11:30.10:420,30,0	0/0:31,0:29:84.15:0,84,1268	0/0:16,0:15:42.06:0,42,640	0/0:29,0:29:87.30:0,87,1388	0/0:18,0:18:54.17:0,54,840	0/0:21,0:21:63.21:0,63,1007	0/0:24,0:23:66.22:0,66,1054	0/0:19,0:19:57.19:0,57,911	0/0:34,0:34:99:0,99,1556	0/0:21,0:21:59.65:0,60,958	0/0:14,0:14:42.14:0,42,671	0/0:29,0:29:87.28:0,87,1366	0/0:24,0:24:72.25:0,72,1151	0/0:30,0:30:90.31:0,90,1436	0/0:11,0:11:33.11:0,33,528	0/0:22,0:22:66.20:0,66,1029	0/0:15,0:15:45.15:0,45,719	0/0:26,0:26:78.27:0,78,1247	0/0:36,0:36:99:0,108,1626	0/0:24,0:24:66.22:0,66,1051	0/0:30,0:30:90.31:0,90,1435	0/0:35,0:35:99:0,102,1626	0/0:10,0:10:27.09:0,27,432	0/0:26,0:26:78.27:0,78,1247	0/0:28,0:28:84.28:0,84,1321	0/0:41,0:41:99:0,120,1918	0/0:8,0:8:21.07:0,21,336
chr10	44904515	.	AC	A	7903.51	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=9.168;DP=656;FS=17.322;HRun=1;HaplotypeScore=89.1043;InbreedingCoeff=0.9973;MQ=61.62;MQ0=1;MQRankSum=-0.556;QD=39.13;ReadPosRankSum=1.572;VQSLOD=3.2256;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,27:29:81.23:1111,81,0	0/0:12,0:12:36.11:0,36,552	0/0:29,0:26:75.25:0,75,1138	0/0:16,0:15:42.14:0,42,622	1/1:0,20:20:60.20:839,60,0	0/0:21,0:21:63.20:0,63,984	0/0:24,0:24:72.25:0,72,1151	0/0:35,0:35:99:0,105,1657	0/0:21,0:21:63.21:0,63,1007	0/0:30,0:30:87.30:0,87,1387	0/0:23,0:23:63.21:0,63,1007	0/0:16,0:16:48.15:0,48,744	0/0:30,0:30:90.31:0,90,1428	0/0:24,0:24:72.25:0,72,1148	0/0:24,0:24:72.25:0,72,1151	0/0:12,0:12:36.12:0,36,576	0/0:20,0:20:60.20:0,60,958	0/0:12,0:12:33.11:0,33,527	1/1:0,32:32:90.77:1256,91,0	1/1:0,27:26:75.12:982,75,0	1/1:0,22:22:57.19:797,57,0	0/0:25,0:25:75.26:0,75,1199	0/0:33,0:33:96.33:0,96,1518	0/0:25,0:25:75.24:0,75,1176	0/0:22,0:22:66.23:0,66,1055	1/1:0,29:29:87.27:1198,87,0	1/1:0,37:37:99:1511,108,0	1/1:0,6:6:15.05:210,15,0
chr10	44904715	.	AAG	A	8021.94	PASS	AB=0.760;AC=16;AF=0.286;AN=56;BaseQRankSum=6.052;DP=572;FS=0.685;HRun=0;HaplotypeScore=80.4513;InbreedingCoeff=0.8523;MQ=78.94;MQ0=1;MQRankSum=-1.911;QD=34.14;ReadPosRankSum=1.340;VQSLOD=7.0986;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,39:39:96.32:1414,96,0	0/0:7,0:7:21.07:0,21,393	0/0:35,0:32:58.38:0,58,1324	0/1:26,0:18:2.79:3,0,591	1/1:0,27:27:75.25:1104,75,0	0/0:19,0:19:57.18:0,57,1036	0/0:12,0:12:36.12:0,36,663	0/0:24,0:24:66.23:0,66,1227	0/0:25,0:25:72.25:0,72,1347	0/0:20,0:20:60.21:0,60,1123	0/0:13,0:13:33.11:0,33,617	0/0:11,0:11:33.11:0,33,618	0/0:21,0:21:60.21:0,60,1123	0/0:15,0:15:45.15:0,45,833	0/0:17,0:17:48.16:0,48,899	0/0:16,0:16:48.16:0,48,899	0/0:17,0:17:51.17:0,51,954	0/0:16,0:16:48.16:0,48,888	1/1:3,23:25:66.22:941,66,0	1/1:0,28:28:81.24:1170,81,0	1/1:1,32:33:85.65:1319,86,0	0/0:18,0:18:48.16:0,48,899	0/0:14,0:14:42.14:0,42,787	0/0:21,0:21:63.20:0,63,1137	0/0:16,0:16:45.13:0,45,809	0/1:2,23:25:40.21:880,0,40	1/1:0,21:21:54.18:795,54,0	1/1:0,10:10:27.09:398,27,0
chr10	44905288	.	GAA	G	6273.55	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=15.509;DP=591;FS=2.519;HRun=4;HaplotypeScore=100.1923;InbreedingCoeff=0.9897;MQ=63.79;MQ0=0;MQRankSum=-3.769;QD=35.24;ReadPosRankSum=1.461;VQSLOD=4.2893;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,37:38:93.31:1360,93,0	0/0:9,0:9:27.09:0,27,490	0/0:24,0:18:51.17:0,51,912	0/0:32,1:31:51.21:0,51,1399	1/1:0,19:19:44.72:573,45,0	0/0:23,0:23:66.21:0,66,1198	0/0:19,0:19:54.17:0,54,966	0/0:26,0:26:75.25:0,75,1369	0/0:21,0:21:60.21:0,60,1124	0/0:23,0:23:66.19:0,66,1172	0/0:12,0:12:36.11:0,36,644	0/0:11,0:11:33.10:0,33,589	0/0:15,0:15:45.15:0,45,830	0/0:18,0:18:51.17:0,51,947	0/0:19,0:19:57.16:0,57,1032	0/0:19,0:19:54.19:0,54,1012	0/0:29,0:29:87.28:0,87,1596	0/0:24,0:24:69.20:0,69,1214	1/1:1,10:7:18.05:246,18,0	1/1:0,20:20:59.98:796,60,0	1/1:2,36:38:87.59:1255,88,0	0/0:17,0:17:48.16:0,48,899	0/0:19,0:19:57.20:0,57,1066	0/0:26,0:26:75.16:0,75,1302	0/0:25,0:25:75.24:0,75,1342	1/1:1,21:22:10:853,10,0	1/1:0,23:23:60.20:883,60,0	1/1:0,7:7:21.07:309,21,0
chr10	44906088	.	TA	T	4049.22	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=12.159;DP=540;FS=5.174;HRun=7;HaplotypeScore=67.6307;InbreedingCoeff=0.9977;MQ=74.03;MQ0=5;MQRankSum=-2.601;QD=25.00;ReadPosRankSum=1.379;VQSLOD=4.4522;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,26:29:72.08:711,72,0	0/0:6,0:6:18.06:0,18,226	0/0:20,0:20:48.15:0,48,590	0/0:13,0:13:33.02:0,33,382	1/1:1,19:20:48.11:489,48,0	0/0:20,0:20:45.11:0,45,539	0/0:17,0:17:48.15:0,48,593	0/0:33,0:25:66.15:0,66,790	0/0:23,0:23:66.21:0,66,830	0/0:35,0:33:93.28:0,93,1146	0/0:16,0:15:33.11:0,33,414	0/0:18,0:18:51.16:0,51,641	0/0:16,0:16:42.13:0,42,527	0/0:20,0:20:48.15:0,48,603	0/0:16,0:15:45.14:0,45,562	0/0:13,0:12:30.10:0,30,373	0/0:19,0:19:42.09:0,42,499	0/0:14,0:14:36.09:0,36,437	1/1:2,13:15:39.05:388,39,0	1/1:5,32:36:93.05:904,93,0	1/1:0,12:12:33.07:337,33,0	0/0:16,0:16:45.14:0,45,566	0/0:26,0:26:72.22:0,72,892	0/0:17,0:17:45.14:0,45,566	0/0:20,0:20:42.13:0,42,518	1/1:5,13:18:36.07:367,36,0	1/1:4,20:24:63.14:639,63,0	1/1:0,7:7:21.05:214,21,0
chr10	44906162	.	CGT	C	11877.16	PASS	AB=0.882;AC=31;AF=0.554;AN=56;BaseQRankSum=14.396;DP=609;FS=8.316;HRun=0;HaplotypeScore=144.4776;InbreedingCoeff=0.9386;MQ=81.69;MQ0=8;MQRankSum=-8.939;QD=33.36;ReadPosRankSum=4.271;VQSLOD=6.5000;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,28:31:72.11:944,72,0	0/0:9,0:9:27.09:0,27,505	0/0:29,0:29:77.96:0,78,1313	0/0:29,0:28:58.51:0,59,1259	1/1:1,17:18:33.10:465,33,0	0/0:19,0:19:57.20:0,57,1055	0/0:9,0:9:24.08:0,24,441	0/0:34,0:26:78.26:0,78,1430	0/0:25,0:25:69.22:0,69,1245	1/1:3,35:36:93.29:1331,93,0	1/1:0,20:19:48.16:707,48,0	0/1:13,2:15:1.96:2,0,688	0/0:18,0:18:54.19:0,54,1003	0/0:18,1:19:37.20:0,37,944	1/1:2,13:14:33.11:485,33,0	1/1:1,17:17:51.17:750,51,0	1/1:0,25:25:60.20:883,60,0	1/1:0,10:10:24.08:353,24,0	1/1:0,18:18:54.13:733,54,0	1/1:2,34:35:66.22:969,66,0	1/1:0,11:11:21.07:308,21,0	0/0:17,0:17:51.17:0,51,955	0/0:24,0:24:69.20:0,69,1224	0/0:17,4:21:7.09:0,7,822	1/1:1,26:27:66.18:947,66,0	1/1:0,35:34:99:1498,102,0	1/1:5,30:35:96.20:1327,96,0	1/1:1,3:4:12.04:174,12,0
chr10	44906301	.	A	AT	792.33	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=13.627;DP=670;FS=3.329;HRun=0;HaplotypeScore=136.7545;InbreedingCoeff=0.9821;MQ=64.58;MQ0=7;MQRankSum=-13.184;QD=8.61;ReadPosRankSum=2.065;VQSLOD=3.8176;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:96.32:0,96,1342	0/0:13,0:13:39.13:0,39,546	0/0:34,0:33:96.29:0,96,1287	0/0:21,0:20:51.17:0,51,709	0/0:26,0:26:75.19:0,75,1009	0/0:17,0:17:51.17:0,51,713	0/0:12,0:12:36.12:0,36,504	0/0:25,0:19:57.18:0,57,782	0/0:30,1:31:81.13:0,81,1227	1/1:6,19:25:36.10:368,36,0	1/1:1,9:10:17.90:67,18,0	0/0:18,0:18:54.17:0,54,740	0/0:27,0:26:78.25:0,78,1073	0/0:28,0:27:78.26:0,78,1090	1/1:0,14:14:33.86:136,34,0	1/1:0,21:21:55.64:246,56,0	0/0:41,0:39:99:0,102,1399	1/1:0,7:7:8.74:51,9,0	0/0:34,0:34:96.31:0,96,1326	0/0:22,0:22:66.05:0,66,835	0/0:19,0:19:51.16:0,51,698	0/0:28,0:28:84.27:0,84,1158	0/0:30,0:30:87.29:0,87,1214	0/0:48,0:48:99:0,138,1890	1/1:1,14:15:26.36:108,26,0	0/0:30,1:31:77.25:0,77,1228	0/0:33,0:33:96.26:0,96,1298	0/0:5,0:5:15.05:0,15,210
chr10	44906303	.	TC	T	351.28	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=13.509;DP=669;FS=5.058;HRun=1;HaplotypeScore=138.4528;InbreedingCoeff=0.9675;MQ=63.90;MQ0=6;MQRankSum=-12.796;QD=3.74;ReadPosRankSum=1.789;VQSLOD=0.5552;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,99,1574	0/0:13,0:13:39.11:0,39,597	0/0:31,0:30:84.27:0,84,1311	0/0:19,0:18:51.17:0,51,809	0/0:26,0:26:72.25:0,72,1145	0/0:17,0:17:51.17:0,51,814	0/0:13,0:13:39.13:0,39,620	0/0:26,0:20:57.18:0,57,884	0/0:29,1:30:83.34:0,83,1361	1/1:7,19:26:18.09:243,18,0	1/1:1,9:10:10.08:26,10,0	0/0:17,0:17:51.16:0,51,791	0/0:27,0:26:75.21:0,75,1146	0/0:27,0:27:78.25:0,78,1222	1/1:0,14:14:20.73:58,21,0	1/1:0,21:21:38.95:121,39,0	0/0:44,0:42:99:0,114,1788	1/1:1,7:8:7.93:33,8,0	0/0:34,0:34:99:0,99,1509	0/0:22,0:22:57.19:0,57,908	0/0:20,0:20:30.22:0,30,743	0/0:28,0:28:84.29:0,84,1333	0/0:29,0:29:87.28:0,87,1360	0/0:47,0:47:99:0,138,2175	1/1:1,14:15:17.10:49,17,0	0/0:30,1:31:82.91:0,83,1425	0/0:33,0:33:93.27:0,93,1449	0/0:5,0:5:15.05:0,15,240
chr10	44907088	.	G	GT	7238.27	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=-8.787;DP=511;FS=19.224;HRun=10;HaplotypeScore=54.7944;InbreedingCoeff=0.9531;MQ=72.79;MQ0=0;MQRankSum=1.206;QD=22.55;ReadPosRankSum=1.543;VQSLOD=3.7966;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,23:25:35.51:583,36,0	1/1:0,0:12:34.16:171,34,0	0/0:19,0:19:13.98:0,14,166	0/0:7,0:7:7.91:0,8,74	1/1:3,24:27:69.13:723,69,0	0/0:19,0:19:47.86:0,48,386	0/0:10,0:10:20.96:0,21,172	0/0:32,1:33:74.84:0,75,609	0/0:15,0:16:40.94:0,41,320	1/1:2,21:23:60.11:616,60,0	1/1:3,15:18:39.02:400,39,0	0/0:7,0:7:17.94:0,18,142	0/0:11,0:11:29.96:0,30,246	0/0:15,0:15:35.94:0,36,296	1/1:3,16:20:16.45:417,16,0	1/1:5,7:12:2.01:209,2,0	1/1:6,1:25:36.96:185,37,0	1/1:6,21:27:38.48:603,38,0	1/1:5,13:18:36.09:384,36,0	1/1:3,23:26:66.17:704,66,0	1/1:1,8:9:24.06:256,24,0	0/0:13,0:14:37.98:0,38,298	0/0:24,0:24:65.90:0,66,542	0/0:15,0:15:38.94:0,39,320	1/1:2,13:16:17.29:374,17,0	1/1:0,21:21:63.12:660,63,0	1/1:6,28:34:72.12:753,72,0	1/1:2,6:8:20.27:199,20,0
chr10	44908130	.	C	CTGCTGA	5967.96	PASS	AB=1.000;AC=22;AF=0.393;AN=56;BaseQRankSum=5.495;DP=737;FS=12.592;HRun=0;HaplotypeScore=199.2246;InbreedingCoeff=0.5269;MQ=55.92;MQ0=25;MQRankSum=-7.386;QD=16.81;ReadPosRankSum=-5.561;VQSLOD=1.6736;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:33,11:44:41.74:720,42,0	0/0:11,0:11:5.54:0,6,317	0/0:25,0:12:26.94:0,27,321	0/0:37,0:21:53.59:0,54,1078	1/1:22,3:25:23.82:419,24,0	0/0:25,0:25:54.08:0,54,939	0/0:28,0:27:72.09:0,72,1313	0/1:21,0:21:34.82:35,0,555	0/0:32,0:32:90.21:0,90,1763	0/1:31,0:31:99:110,0,577	0/1:24,0:24:57.99:58,0,286	0/0:29,0:29:87.20:0,87,1732	0/0:32,0:32:90.19:0,90,1728	0/0:36,0:36:99:0,99,2042	0/0:24,0:24:63.25:0,63,774	0/0:11,0:11:8.05:0,8,333	0/1:40,0:40:10.83:11,0,1038	0/1:14,0:14:10.02:10,0,310	1/1:25,3:27:74.93:1120,75,0	1/1:16,7:23:20.71:341,21,0	1/1:22,5:27:11.71:261,12,0	0/0:30,0:30:69.13:0,69,1168	0/0:18,0:18:41.73:0,42,665	0/0:44,0:44:99:0,129,2584	0/1:17,0:17:58.11:58,0,247	1/1:17,6:24:42.20:1523,42,0	1/1:27,5:32:60.02:1188,60,0	1/1:5,0:5:11.93:114,12,0
chr10	44908139	.	ATGG	A	1044.78	PASS	AB=0.919;AC=12;AF=0.214;AN=56;BaseQRankSum=11.597;DP=730;FS=6.672;HRun=0;HaplotypeScore=166.2935;InbreedingCoeff=0.5831;MQ=51.00;MQ0=37;MQRankSum=-7.975;QD=5.20;ReadPosRankSum=-1.889;VQSLOD=2.2024;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:37,4:41:30.63:171,0,31	0/0:12,0:12:28.84:0,29,484	0/0:25,0:5:8.91:0,9,64	0/0:39,1:18:45.47:0,45,631	1/1:24,1:25:14.99:135,15,0	0/0:20,0:20:57.09:0,57,1024	0/0:30,0:29:75.05:0,75,1293	0/0:24,0:24:72.11:0,72,1172	0/0:36,0:36:99:0,105,1834	0/0:28,0:27:49.63:0,50,824	0/0:18,0:18:22.55:0,23,394	0/0:31,0:31:90.27:0,90,1813	0/0:32,0:32:96.24:0,96,1867	0/0:35,0:35:99:0,102,1990	0/0:26,0:26:69.56:0,70,1207	0/0:13,0:13:29.70:0,30,453	0/0:36,0:36:96.22:0,96,1887	0/0:13,0:13:25.61:0,26,384	0/1:23,4:26:99:222,0,271	1/1:21,0:21:11.48:76,11,0	1/1:25,1:26:10.15:68,10,0	0/0:29,0:29:69.01:0,69,1040	0/0:19,0:19:39.05:0,39,677	0/0:44,0:44:99:0,129,2640	0/0:18,0:18:47.53:0,48,610	0/1:22,3:25:99:236,0,176	1/1:30,3:33:28.44:287,28,0	0/1:3,0:3:3.34:19,0,3
chr10	44908160	.	GTGATGATGATGGTGGTGGTGA	G	4086.02	PASS	AB=1.000;AC=16;AF=0.286;AN=56;BaseQRankSum=10.650;DP=702;FS=6.679;HRun=0;HaplotypeScore=327.9075;InbreedingCoeff=0.7529;MQ=49.64;MQ0=49;MQRankSum=-11.545;QD=22.45;ReadPosRankSum=-3.947;VQSLOD=0.7591;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:34,0:34:61.97:1154,62,0	0/0:7,0:7:21.07:0,21,1497	0/1:31,0:3:2.97:3,0,193	0/0:44,0:8:21.41:0,21,572	1/1:2,12:14:2.73:57,3,0	0/0:20,0:20:57.19:0,57,3159	0/0:29,0:28:75.26:0,75,3347	0/0:27,0:25:69.22:0,69,2146	0/0:37,0:37:99:0,108,7405	0/0:37,0:35:96.33:0,96,4282	0/0:18,0:17:36.12:0,36,2278	0/0:30,0:30:87.28:0,87,6018	0/0:29,0:29:84.25:0,84,5778	0/0:36,0:36:99:0,105,5841	0/0:31,0:31:93.32:0,93,6203	0/0:22,0:22:66.23:0,66,4577	0/0:33,0:33:90.31:0,90,5890	0/0:15,0:15:45.14:0,45,2979	1/1:12,0:10:26.92:756,27,0	1/1:5,11:16:5.89:37,6,0	1/1:27,0:26:0.14:1,0,0	0/0:24,0:24:51.17:0,51,3155	0/0:20,0:20:47.51:0,48,2511	0/0:46,0:46:99:0,132,7941	0/0:15,0:15:39.13:0,39,2536	0/1:18,0:17:99:1014,0,141	1/1:9,16:25:26.72:684,27,0	1/1:5,0:5:15:381,15,0
chr10	44908169	.	ATGG	A	649.94	PASS	AB=0.924;AC=11;AF=0.204;AN=54;BaseQRankSum=10.403;DP=726;FS=3.935;HRun=0;HaplotypeScore=131.9095;InbreedingCoeff=0.6645;MQ=48.97;MQ0=45;MQRankSum=-9.636;QD=5.16;ReadPosRankSum=-1.511;VQSLOD=2.2347;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:29,1:30:37.15:256,37,0	0/0:10,0:10:30.06:0,30,491	0/0:32,0:6:16.77:0,17,188	0/0:47,0:12:24.02:0,24,360	1/1:14,0:13:2.22:7,2,0	0/0:25,0:25:66:0,66,1052	0/0:26,0:26:54.11:0,54,1032	0/0:29,0:27:66.17:0,66,1114	0/0:40,0:40:99:0,111,2167	0/0:40,0:36:75.19:0,75,1335	0/0:20,0:18:32.68:0,33,680	0/0:30,0:30:84.28:0,84,1732	0/0:30,0:30:87.24:0,87,1708	0/0:41,0:41:99:0,105,1889	0/0:30,0:30:87.25:0,87,1729	0/0:23,0:23:66.23:0,66,1338	0/0:37,0:36:99:0,105,1898	0/0:14,0:14:39.13:0,39,791	0/1:14,0:10:54.56:90,0,55	./.	0/1:22,2:20:0.50:1,0,1	0/0:26,0:26:56.72:0,57,1010	0/0:24,0:23:45.07:0,45,828	0/0:46,0:46:99:0,117,2425	0/0:16,0:15:36.10:0,36,671	0/1:14,3:14:33.67:228,0,34	1/1:22,0:22:15.77:110,16,0	1/1:4,1:5:11.96:110,12,0
chr10	44908178	.	GTGA	G	1075.90	PASS	AB=0.759;AC=10;AF=0.179;AN=56;BaseQRankSum=10.903;DP=735;FS=0.605;HRun=0;HaplotypeScore=125.4646;InbreedingCoeff=0.5267;MQ=48.63;MQ0=55;MQRankSum=-7.934;QD=7.85;ReadPosRankSum=-2.917;VQSLOD=2.2081;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,18:27:47.58:424,48,0	0/0:10,0:10:27.09:0,27,564	0/0:43,0:8:22.72:0,23,327	0/0:50,1:15:43.02:0,43,550	0/0:15,0:14:2.45:0,2,9	0/0:25,0:25:66.03:0,66,1176	0/0:26,0:26:60.15:0,60,1162	0/0:31,0:28:75.41:0,75,1240	0/0:40,0:40:99:0,116,2312	0/0:37,0:33:84:0,84,1507	0/0:17,0:15:32.68:0,33,748	0/0:33,0:33:99:0,99,1993	0/0:32,0:32:93.24:0,93,1905	0/0:36,0:36:95.03:0,95,2149	0/0:28,0:28:81.28:0,81,1806	0/0:22,0:22:66.17:0,66,1381	0/0:36,0:35:93.27:0,93,1949	0/0:14,0:14:42.08:0,42,863	0/1:16,9:16:46.22:228,0,46	1/1:13,0:11:2.92:17,3,0	0/1:12,16:23:0.50:1,0,1	0/0:22,0:22:51.34:0,51,1143	0/0:21,0:20:46.53:0,47,991	0/0:45,0:45:99:0,126,2573	0/0:14,0:13:33.11:0,33,736	0/1:12,6:14:48.24:255,0,48	0/1:19,2:21:7.35:130,0,7	1/1:1,4:5:11.98:168,12,0
chr10	44909538	.	C	CA	10623.10	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=-6.095;DP=592;FS=3.718;HRun=7;HaplotypeScore=67.2190;InbreedingCoeff=0.9956;MQ=66.44;MQ0=0;MQRankSum=1.402;QD=31.15;ReadPosRankSum=1.261;VQSLOD=5.0836;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,43:45:99:1522,126,0	1/1:2,5:7:15.05:181,15,0	0/0:15,0:14:35.88:0,36,325	0/0:23,0:21:28.60:0,29,393	1/1:3,24:28:69.21:827,69,0	0/0:29,0:29:81.12:0,81,782	0/0:21,0:21:60.10:0,60,579	1/1:7,16:23:24.70:561,25,0	0/0:27,0:27:78.11:0,78,747	1/1:4,18:22:54.15:640,54,0	1/1:5,23:28:72.14:837,72,0	0/0:18,0:18:45.07:0,45,434	0/0:15,0:15:36.05:0,36,348	0/0:15,0:15:36.06:0,36,347	1/1:2,17:19:51.16:616,51,0	1/1:1,16:17:42.13:507,42,0	0/0:16,0:16:45.07:0,45,435	1/1:0,11:11:30.09:362,30,0	1/1:3,14:17:16.48:478,16,0	1/1:2,22:24:66.20:797,66,0	1/1:1,36:37:96.29:1160,96,0	0/0:23,0:23:60.08:0,60,574	0/0:28,0:28:78.12:0,78,752	0/0:21,0:21:60.10:0,60,579	1/1:1,9:10:30.09:359,30,0	1/1:1,16:17:48.15:580,48,0	1/1:1,22:23:63.19:761,63,0	1/1:0,12:12:36.11:435,36,0
chr10	44909777	.	C	CT	4895.46	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-13.234;DP=558;FS=0.000;HRun=8;HaplotypeScore=59.8632;InbreedingCoeff=0.9940;MQ=61.55;MQ0=1;MQRankSum=1.468;QD=28.63;ReadPosRankSum=0.135;VQSLOD=5.0233;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,14:15:42.12:485,42,0	0/0:11,0:11:30.01:0,30,275	0/0:18,0:11:17.93:0,18,152	0/0:13,0:12:13.51:0,14,189	1/1:4,25:29:75.22:866,75,0	0/0:22,0:22:63.03:0,63,576	0/0:14,0:14:33.01:0,33,302	0/0:41,0:40:83.99:0,84,761	0/0:16,0:16:48.01:0,48,435	0/0:3,0:25:34.29:0,34,110	0/0:0,0:22:44.82:0,45,132	0/0:15,0:15:36.02:0,36,330	0/0:21,0:21:51.02:0,51,467	0/0:20,0:20:57.02:0,57,517	0/0:2,0:19:32.59:0,33,96	0/0:2,0:16:31.52:0,32,111	0/0:20,0:20:54.02:0,54,490	0/0:1,0:16:26.48:0,26,78	1/1:5,15:18:48.13:541,48,0	1/1:4,27:31:78.19:885,78,0	1/1:0,13:13:39.12:450,39,0	0/0:22,0:22:57.01:0,57,518	0/0:30,0:30:75.02:0,75,686	0/0:13,0:13:36.02:0,36,330	0/0:0,0:13:26.48:0,26,78	1/1:4,21:26:59.22:710,59,0	1/1:3,18:21:57.16:647,57,0	1/1:1,14:15:27.08:312,27,0
chr10	44909985	.	AAATATG	A	4212.43	PASS	AB=0.700;AC=15;AF=0.268;AN=56;BaseQRankSum=12.522;DP=402;FS=0.000;HRun=0;HaplotypeScore=118.1696;InbreedingCoeff=0.9421;MQ=71.92;MQ0=0;MQRankSum=-12.070;QD=49.56;ReadPosRankSum=1.739;VQSLOD=4.6005;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,3:8:14.98:193,15,0	0/0:7,0:7:21.07:0,21,756	0/0:15,0:15:39.60:0,40,1242	0/0:10,0:10:27.09:0,27,780	0/1:4,3:6:0.64:191,0,1	0/0:21,0:21:63.22:0,63,2121	0/0:9,0:9:27.09:0,27,974	0/0:29,0:29:78.27:0,78,2670	0/0:24,0:24:72.25:0,72,2537	0/0:31,0:31:93.32:0,93,3266	0/0:18,0:18:51.18:0,51,1802	0/0:14,0:14:42.14:0,42,1500	0/0:17,0:17:51.18:0,51,1779	0/0:10,0:10:27.09:0,27,972	0/0:10,0:10:30.10:0,30,1082	0/0:6,0:6:18.06:0,18,610	0/0:15,0:15:42.14:0,42,1441	0/0:12,0:12:36.08:0,36,1172	1/1:2,8:10:29.97:601,30,0	1/1:0,8:7:21.07:431,21,0	1/1:4,7:11:27.07:439,27,0	0/0:17,0:17:51.18:0,51,1838	0/0:29,0:29:84.29:0,84,2960	0/0:16,0:16:48.16:0,48,1731	0/0:7,0:7:21.07:0,21,757	1/1:3,13:16:35.40:877,35,0	1/1:4,16:20:54.18:1175,54,0	1/1:1,4:5:15.05:307,15,0
chr10	44909987	.	AT	A	2357.75	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=12.955;DP=398;FS=0.000;HRun=1;HaplotypeScore=82.5319;InbreedingCoeff=0.9840;MQ=72.20;MQ0=0;MQRankSum=-11.643;QD=28.41;ReadPosRankSum=1.224;VQSLOD=3.4092;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,4:7:15.05:191,15,0	0/0:7,0:7:21.07:0,21,328	0/0:14,0:14:39.11:0,39,584	0/0:10,0:10:21.05:0,21,376	1/1:3,4:6:12.04:149,12,0	0/0:21,0:21:63.21:0,63,981	0/0:9,0:9:27.09:0,27,422	0/0:27,0:27:81.23:0,81,1185	0/0:25,0:25:72.24:0,72,1123	0/0:32,0:32:96.32:0,96,1472	0/0:17,0:17:51.11:0,51,765	0/0:14,0:14:42.14:0,42,657	0/0:17,0:17:51.17:0,51,792	0/0:10,0:10:30.09:0,30,445	0/0:10,0:10:30.10:0,30,469	0/0:6,0:6:18.06:0,18,280	0/0:14,0:14:42.14:0,42,656	0/0:12,0:12:36.01:0,36,501	1/1:8,2:10:30.07:358,30,0	1/1:8,0:7:19.30:225,19,0	1/1:8,3:11:21.95:257,22,0	0/0:17,0:17:51.17:0,51,796	0/0:29,0:29:84.23:0,84,1275	0/0:16,0:16:48.16:0,48,751	0/0:8,0:8:21.07:0,21,329	1/1:13,2:15:45.14:554,45,0	1/1:16,3:20:54.17:659,54,0	1/1:5,0:5:15:169,15,0
chr10	44909996	.	GTTTT	G	2090.64	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=12.279;DP=380;FS=0.517;HRun=4;HaplotypeScore=103.3205;InbreedingCoeff=0.9493;MQ=72.81;MQ0=0;MQRankSum=-11.870;QD=32.67;ReadPosRankSum=4.078;VQSLOD=0.2580;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,3:3:3.01:39,3,0	0/0:7,0:7:21.07:0,21,608	0/0:15,0:15:45.13:0,45,1189	0/0:10,0:10:30.10:0,30,856	1/1:0,3:3:9.03:117,9,0	0/0:19,0:19:57.20:0,57,1578	0/0:12,0:12:36.12:0,36,1033	0/0:26,0:26:78.27:0,78,2245	0/0:27,0:27:81.28:0,81,2275	0/0:29,0:29:87.30:0,87,2504	0/0:18,0:18:54.19:0,54,1549	0/0:14,0:14:42.14:0,42,1209	0/0:16,0:16:48.16:0,48,1322	0/0:12,0:12:36.12:0,36,1033	0/0:10,0:10:30.10:0,30,870	0/0:5,0:5:15.05:0,15,416	0/0:12,0:12:33.11:0,33,956	0/0:13,0:13:39.13:0,39,1068	1/1:1,8:9:24.08:330,24,0	1/1:0,8:7:19.61:243,20,0	1/1:0,7:7:20.55:201,21,0	0/0:17,0:17:51.18:0,51,1455	0/0:28,0:28:84.27:0,84,2362	0/0:16,0:16:48.16:0,48,1391	0/0:10,0:10:30.10:0,30,825	1/1:0,13:13:39.13:530,39,0	1/1:1,16:17:51.17:665,51,0	1/1:0,4:4:12.04:163,12,0
chr10	44910001	.	AGGCT	A	2170.47	PASS	AB=0.529;AC=15;AF=0.268;AN=56;BaseQRankSum=12.247;DP=373;FS=0.000;HRun=0;HaplotypeScore=102.1243;InbreedingCoeff=0.8559;MQ=71.92;MQ0=0;MQRankSum=-11.932;QD=33.91;ReadPosRankSum=3.901;VQSLOD=3.6570;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,3:3:3.01:42,3,0	0/0:7,0:7:21.07:0,21,608	0/0:15,0:15:45.15:0,45,1188	0/0:10,0:10:30.10:0,30,814	1/1:0,3:3:9.03:125,9,0	0/0:20,0:20:57.20:0,57,1634	0/0:12,0:12:36.12:0,36,1048	0/0:25,0:25:75.26:0,75,2145	0/0:26,0:26:78.25:0,78,2196	0/0:29,0:29:87.30:0,87,2432	0/0:18,0:18:51.16:0,51,1364	0/0:14,0:14:42.14:0,42,1217	0/0:13,0:13:39.13:0,39,1127	0/0:13,0:13:39.13:0,39,1113	0/0:9,0:9:27.09:0,27,766	0/0:4,0:4:12.04:0,12,348	0/0:11,0:11:33.11:0,33,938	0/0:13,0:13:36.12:0,36,1043	1/1:0,8:8:24.08:337,24,0	1/1:0,8:7:20.74:264,21,0	1/1:0,7:7:20.74:217,21,0	0/0:17,0:17:48.16:0,48,1373	0/0:27,0:27:78.27:0,78,2135	0/0:16,0:16:48.16:0,48,1391	0/0:10,0:10:30.10:0,30,819	1/1:0,13:13:39.13:544,39,0	0/1:2,16:18:13.62:661,0,14	1/1:0,4:4:12.04:170,12,0
chr10	44912447	.	CTTTCAGCCTAGGTTGGCTTTAAATGGACT	C	13479.87	PASS	AB=0.643;AC=15;AF=0.268;AN=56;BaseQRankSum=11.988;DP=591;FS=1.063;HRun=0;HaplotypeScore=429.8516;InbreedingCoeff=0.8490;MQ=72.37;MQ0=0;MQRankSum=-12.231;QD=90.47;ReadPosRankSum=5.561;VQSLOD=2.6854;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:20,17:37:33.11:2403,33,0	0/0:8,0:8:24.08:0,24,2537	0/0:23,0:23:60.21:0,60,4114	0/0:23,0:23:65.27:0,65,4167	1/1:9,13:21:26.97:1917,27,0	0/0:18,0:18:51.18:0,51,6389	0/0:21,0:21:63.22:0,63,7683	0/0:27,0:27:78.27:0,78,7034	0/0:26,0:26:73.80:0,74,9104	0/0:23,0:23:66.23:0,66,8350	0/0:21,0:21:57.18:0,57,5486	0/0:23,0:23:66.21:0,66,5585	0/0:23,0:23:60.21:0,60,6815	0/0:27,0:27:81.28:0,81,8648	0/0:20,0:20:54.19:0,54,6470	0/0:17,0:17:48.15:0,48,5468	0/0:29,0:29:84.29:0,84,10016	0/0:17,0:17:48.16:0,48,5883	1/1:12,4:16:12.04:923,12,0	1/1:9,9:18:1.68:2274,2,0	1/1:9,5:14:9.03:692,9,0	0/0:25,0:25:69.24:0,69,8405	0/0:18,0:18:48.62:0,49,5474	0/0:37,0:37:99:0,105,12112	0/0:16,0:16:48.16:0,48,5926	0/1:8,10:18:99:2273,0,372	1/1:9,9:17:24.08:1845,24,0	1/1:1,5:6:15.05:1153,15,0
chr10	44912638	.	TTGTGTGTG	T	2321.57	PASS	AB=0.844;AC=17;AF=0.327;AN=52;BaseQRankSum=3.049;DP=573;FS=4.550;HRun=0;HaplotypeScore=147.6032;InbreedingCoeff=0.6186;MQ=67.51;MQ0=3;MQRankSum=-5.595;QD=12.28;ReadPosRankSum=0.233;VQSLOD=2.7071;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:28,2:30:29.57:191,0,30	1/1:8,0:11:6.02:112,6,0	./.	./.	0/0:12,0:19:21:0,21,244	0/0:22,0:24:39.11:0,39,1195	0/0:18,0:18:21.53:0,22,735	0/1:31,0:31:27.51:28,0,65	0/0:18,0:25:36.08:0,36,1049	0/0:22,0:25:34.63:0,35,694	0/0:5,0:17:27.09:0,27,613	0/0:10,0:14:21.54:0,22,603	0/0:12,0:16:36.10:0,36,1097	0/0:12,0:16:3.01:0,3,120	0/0:6,0:10:12.04:0,12,262	0/0:7,0:11:8.86:0,9,197	0/0:15,0:19:12.51:0,13,367	0/0:6,0:14:10.28:0,10,197	1/1:15,6:21:20.94:395,21,0	1/1:6,9:15:24.08:602,24,0	1/1:17,3:19:2.97:20,3,0	0/0:22,0:35:51.65:0,52,1657	0/0:17,0:25:23.79:0,24,716	0/0:17,0:32:42.14:0,42,1507	0/1:5,1:13:51.18:51,0,409	1/1:9,10:19:27:502,27,0	1/1:9,7:16:15.05:376,15,0	1/1:5,6:9:9.03:226,9,0
chr10	44913661	.	C	CATGTATGT	4823.55	PASS	AB=0.881;AC=21;AF=0.404;AN=52;BaseQRankSum=-3.603;DP=695;FS=6.736;HRun=0;HaplotypeScore=201.0898;InbreedingCoeff=0.7621;MQ=60.99;MQ0=5;MQRankSum=-3.528;QD=14.62;ReadPosRankSum=-1.917;VQSLOD=2.6451;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:28,21:52:7.06:134,7,0	1/1:7,0:12:11.97:97,12,0	./.	./.	1/1:8,20:30:12.04:401,12,0	0/0:11,0:24:18.06:0,18,335	0/0:28,0:28:30.19:0,30,696	0/0:34,0:31:14.24:0,14,70	0/0:33,0:33:63.12:0,63,1108	0/1:15,0:30:17.76:18,0,403	0/0:8,0:25:31.35:0,31,556	0/0:18,0:18:21.07:0,21,496	0/0:15,0:17:24.05:0,24,454	0/0:20,0:20:24.08:0,24,574	0/0:4,0:23:18.62:0,19,624	0/0:14,0:23:27.09:0,27,500	0/1:12,0:26:1.03:149,0,1	0/0:5,0:15:15.05:0,15,271	1/1:21,0:19:15.02:173,15,0	1/1:8,17:26:27.09:1083,27,0	1/1:33,0:33:41.11:709,41,0	0/0:20,0:21:30.06:0,30,555	0/0:25,0:25:23.80:0,24,538	0/0:19,0:18:31.60:0,32,501	0/1:12,0:14:5.49:5,0,146	1/1:14,15:32:54.04:1080,54,0	1/1:19,19:40:19.88:730,20,0	1/1:7,5:12:6.02:245,6,0
chr10	44914029	.	G	GA	12692.12	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=-15.240;DP=556;FS=1.042;HRun=3;HaplotypeScore=47.2834;InbreedingCoeff=0.9982;MQ=79.37;MQ0=0;MQRankSum=-2.170;QD=37.44;ReadPosRankSum=0.674;VQSLOD=4.9929;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,27:27:72.24:1008,72,0	1/1:0,6:6:18.06:252,18,0	0/0:22,0:22:59.97:0,60,697	0/0:14,0:14:39.08:0,39,443	1/1:1,31:32:84.28:1175,84,0	0/0:24,0:24:72.22:0,72,863	0/0:19,0:19:54.14:0,54,624	1/1:3,29:32:87.28:1198,87,0	0/0:19,0:19:54.16:0,54,648	1/1:0,24:24:72.24:1009,72,0	1/1:3,26:29:75.16:1005,75,0	0/0:9,0:9:27.08:0,27,324	0/0:16,0:16:45.14:0,45,539	0/0:24,0:24:66.18:0,66,769	1/1:0,13:13:36.12:504,36,0	1/1:0,22:22:63.21:882,63,0	0/0:19,0:19:51.13:0,51,598	1/1:0,11:11:30.10:420,30,0	1/1:4,28:32:84.25:1139,84,0	1/1:0,27:27:81.19:1084,81,0	1/1:0,16:16:42.14:588,42,0	0/0:17,0:17:48.13:0,48,565	0/0:24,0:24:69.19:0,69,804	0/0:10,0:10:30.09:0,30,355	1/1:0,10:10:24.08:336,24,0	1/1:3,29:32:87.25:1167,87,0	1/1:4,12:16:36.12:504,36,0	1/1:0,10:10:30.10:420,30,0
chr10	44914703	.	GA	G	4014.36	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=14.623;DP=424;FS=16.824;HRun=5;HaplotypeScore=52.5294;InbreedingCoeff=0.9931;MQ=81.31;MQ0=0;MQRankSum=-3.891;QD=31.61;ReadPosRankSum=1.857;VQSLOD=2.2792;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,29:30:78.22:885,78,0	0/0:7,0:7:18.05:0,18,230	0/0:14,0:14:42.13:0,42,554	0/0:26,0:26:49.64:0,50,744	1/1:1,18:19:48.13:543,48,0	0/0:11,0:11:30.10:0,30,410	0/0:9,0:9:27.09:0,27,369	0/0:26,0:26:72.23:0,72,971	0/0:19,0:19:57.19:0,57,780	0/0:22,0:22:63.21:0,63,862	0/0:17,0:17:48.16:0,48,656	0/0:8,0:8:21.07:0,21,287	0/0:12,0:12:36.12:0,36,492	0/0:12,0:12:36.12:0,36,493	0/0:17,0:17:51.17:0,51,698	0/0:7,0:7:21.07:0,21,287	0/0:16,0:16:48.16:0,48,657	0/0:5,0:5:15.05:0,15,205	1/1:0,9:9:27.08:306,27,0	1/1:0,11:11:33.09:374,33,0	1/1:1,15:16:42.12:476,42,0	0/0:19,0:19:51.17:0,51,698	0/0:17,1:18:20.14:0,20,664	0/0:10,0:10:27.09:0,27,369	0/0:22,0:22:66.21:0,66,889	1/1:0,12:12:36.10:408,36,0	1/1:0,14:14:42.12:476,42,0	1/1:0,16:16:48.14:544,48,0
chr10	44914935	.	A	AAGGG	377.21	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-2.997;DP=373;FS=6.256;HRun=0;HaplotypeScore=60.7719;InbreedingCoeff=0.8616;MQ=78.38;MQ0=0;MQRankSum=-0.621;QD=53.89;ReadPosRankSum=0.746;VQSLOD=3.9528;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:45.15:0,45,828	1/1:1,6:7:18.06:468,18,0	0/0:15,0:15:45.15:0,45,763	0/0:14,0:14:36.11:0,36,584	0/0:13,0:13:36.12:0,36,663	0/0:15,0:15:36.12:0,36,662	0/0:10,0:10:27.09:0,27,497	0/0:24,0:24:63.22:0,63,1159	0/0:16,0:16:42.14:0,42,766	0/0:15,0:15:42.14:0,42,773	0/0:15,0:15:42.14:0,42,768	0/0:7,0:7:18.06:0,18,331	0/0:17,0:17:42.14:0,42,756	0/0:16,0:16:48.16:0,48,869	0/0:13,0:13:36.12:0,36,663	0/0:6,0:6:15.05:0,15,276	0/0:20,0:19:51.17:0,51,923	0/0:11,0:11:33.09:0,33,574	0/0:18,0:18:54.18:0,54,976	0/0:15,0:15:45.15:0,45,817	0/0:3,0:3:6.02:0,6,110	0/0:7,0:7:21.07:0,21,387	0/0:7,0:7:18.06:0,18,319	0/0:8,0:8:24.08:0,24,442	0/0:10,0:10:27.09:0,27,497	0/0:18,0:18:54.17:0,54,960	0/0:28,0:28:84.26:0,84,1485	0/0:8,0:8:21.07:0,21,386
chr10	44916435	.	GA	G	10541.22	PASS	AB=0.524;AC=33;AF=0.589;AN=56;BaseQRankSum=12.992;DP=574;FS=2.411;HRun=5;HaplotypeScore=61.0042;InbreedingCoeff=0.9285;MQ=63.06;MQ0=1;MQRankSum=0.035;QD=29.28;ReadPosRankSum=2.289;VQSLOD=5.3710;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,35:36:84.24:952,84,0	1/1:0,7:7:21.06:238,21,0	0/0:23,0:20:49.17:0,49,676	0/0:15,0:10:19.57:0,20,237	1/1:2,25:27:54.15:613,54,0	0/0:25,0:25:72.22:0,72,954	0/0:12,0:12:27.09:0,27,369	1/1:4,23:27:69.20:782,69,0	0/0:24,0:24:69.19:0,69,908	1/1:0,26:26:78.22:885,78,0	1/1:0,18:18:54.15:612,54,0	0/0:20,0:20:57.19:0,57,780	0/0:18,0:18:45.15:0,45,616	0/0:10,0:10:24.08:0,24,328	1/1:2,17:19:51.14:579,51,0	0/1:1,10:11:10.96:276,0,11	1/1:4,13:17:39.11:442,39,0	1/1:1,21:22:60.17:681,60,0	1/1:0,6:6:18.04:196,18,0	1/1:0,43:43:99:1395,123,0	1/1:1,13:14:33.09:374,33,0	0/0:17,0:17:42.13:0,42,559	0/0:28,0:28:66.22:0,66,903	0/0:21,0:21:57.18:0,57,763	1/1:1,23:24:60.17:679,60,0	1/1:2,26:28:78.22:885,78,0	1/1:0,21:21:57.16:647,57,0	1/1:0,13:13:27.08:306,27,0
chr10	44917313	.	GA	G	7120.61	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=16.752;DP=633;FS=5.104;HRun=1;HaplotypeScore=74.6075;InbreedingCoeff=0.9871;MQ=52.87;MQ0=4;MQRankSum=2.077;QD=37.28;ReadPosRankSum=4.013;VQSLOD=5.4190;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,39:38:96.32:1342,96,0	0/0:8,0:8:24.08:0,24,381	0/0:19,0:9:27.09:0,27,430	0/0:20,0:10:27.09:0,27,421	1/1:0,29:29:81.27:1132,81,0	0/0:23,0:23:60.19:0,60,929	0/0:20,0:20:51.17:0,51,815	0/0:26,0:25:69.17:0,69,1029	0/0:28,0:28:75.24:0,75,1171	0/0:35,0:35:99:0,102,1631	0/0:33,0:33:81.24:0,81,1243	0/0:19,0:19:54.17:0,54,839	0/0:13,0:13:39.13:0,39,623	0/0:27,0:27:75.26:0,75,1192	0/0:13,0:13:39.13:0,39,623	0/0:26,0:26:75.24:0,75,1175	0/0:30,0:30:78.23:0,78,1219	0/0:17,0:17:42.14:0,42,671	1/1:1,13:13:36.12:501,36,0	1/1:0,38:38:99:1468,105,0	1/1:0,18:18:51.17:713,51,0	0/0:16,0:16:45.15:0,45,719	0/0:31,0:31:81.28:0,81,1295	0/0:15,0:15:42.10:0,42,643	0/0:23,0:23:63.21:0,63,1007	1/1:1,21:22:9.18:707,9,0	1/1:0,26:26:75.25:1048,75,0	1/1:0,5:5:15.05:210,15,0
chr10	44917893	.	TA	T	5061.40	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=17.336;DP=626;FS=0.000;HRun=7;HaplotypeScore=96.4883;InbreedingCoeff=0.9983;MQ=56.40;MQ0=7;MQRankSum=1.462;QD=24.57;ReadPosRankSum=0.778;VQSLOD=4.7608;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,28:30:78.17:794,78,0	0/0:12,0:12:33.11:0,33,415	0/0:26,0:12:19.81:0,20,214	0/0:21,0:11:33.09:0,33,384	1/1:0,31:31:78.17:794,78,0	0/0:21,0:21:60.18:0,60,744	0/0:17,0:17:48.11:0,48,586	0/0:23,0:22:57.18:0,57,717	0/0:29,0:29:81.24:0,81,1005	0/0:27,0:27:78.25:0,78,981	0/0:31,0:31:84.23:0,84,1005	0/0:17,0:16:41.94:0,42,516	0/0:18,0:18:51.16:0,51,642	0/0:17,0:17:48.14:0,48,592	0/0:17,0:17:48.14:0,48,593	0/0:9,0:9:27.09:0,27,340	0/0:29,0:27:69.19:0,69,852	0/0:16,0:16:42.12:0,42,514	1/1:2,14:15:39.09:398,39,0	1/1:1,40:41:99:1037,102,0	1/1:3,17:20:45.10:459,45,0	0/0:25,0:25:69.22:0,69,864	0/0:35,0:35:92.83:0,93,1111	0/0:14,0:14:36.11:0,36,441	0/0:16,0:16:39.12:0,39,491	1/1:3,24:27:72.16:734,72,0	1/1:7,22:29:54.10:550,54,0	1/1:1,11:12:22.92:295,23,0
chr10	44918342	.	CA	C	3663.74	PASS	AB=0.744;AC=30;AF=0.536;AN=56;BaseQRankSum=11.836;DP=586;FS=10.362;HRun=10;HaplotypeScore=91.6879;InbreedingCoeff=0.6389;MQ=55.70;MQ0=3;MQRankSum=-3.661;QD=9.42;ReadPosRankSum=0.095;VQSLOD=1.6755;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,0:19:18.31:54,18,0	1/1:2,0:11:16.29:48,16,0	0/1:23,0:13:2.47:2,0,44	0/1:23,1:16:13.38:13,0,175	0/1:1,0:17:3.67:48,0,4	0/0:20,0:19:54.13:0,54,582	0/0:11,0:11:21.04:0,21,224	0/1:13,17:28:72.55:356,0,73	0/0:18,0:18:45.12:0,45,498	1/1:8,18:26:23.80:435,24,0	1/1:4,31:35:80.95:703,81,0	0/0:21,0:21:51.11:0,51,546	0/0:18,0:18:51.07:0,51,548	0/0:16,0:16:42.11:0,42,465	1/1:2,18:20:50.99:443,51,0	1/1:1,15:16:35.99:313,36,0	0/0:26,0:28:71.85:0,72,749	1/1:7,19:26:53.97:469,54,0	0/1:7,0:6:3.34:3,0,42	1/1:10,0:34:32.54:133,33,0	1/1:2,0:11:20.15:59,20,0	0/0:28,0:26:63.16:0,63,690	0/0:23,0:22:63.16:0,63,690	0/0:14,0:14:33.09:0,33,365	1/1:5,16:21:41.98:365,42,0	0/1:8,0:20:45.96:46,0,62	1/1:7,0:16:28.52:84,29,0	1/1:6,0:20:30.55:90,31,0
chr10	44918382	.	GA	G	4703.77	PASS	AB=0.567;AC=15;AF=0.268;AN=56;BaseQRankSum=14.523;DP=565;FS=29.840;HRun=2;HaplotypeScore=83.2542;InbreedingCoeff=0.8966;MQ=50.08;MQ0=43;MQRankSum=-8.067;QD=31.57;ReadPosRankSum=0.693;VQSLOD=2.8549;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:4,13:16:6.01:389,0,6	0/0:9,0:9:27.09:0,27,403	0/0:33,0:4:8.99:0,9,110	0/0:22,1:3:6.02:0,6,90	1/1:1,22:22:48.16:622,48,0	0/0:19,0:19:57.19:0,57,853	0/0:10,0:10:27.08:0,27,384	0/0:39,0:29:78.26:0,78,1151	0/0:16,0:16:48.16:0,48,719	0/0:22,0:22:63.20:0,63,927	0/0:37,0:37:99:0,102,1504	0/0:13,0:13:39.13:0,39,585	0/0:17,0:17:51.17:0,51,761	0/0:19,0:19:57.19:0,57,854	0/0:13,0:13:36.12:0,36,540	0/0:14,0:14:33.11:0,33,495	0/0:28,0:28:75.22:0,75,1100	0/0:20,0:19:51.17:0,51,764	1/1:1,8:7:21.04:255,21,0	1/1:4,37:39:99:1361,105,0	1/1:2,9:11:27.09:350,27,0	0/0:25,0:25:69.23:0,69,1033	0/0:26,0:26:75.25:0,75,1123	0/0:16,0:15:41.88:0,42,610	0/0:17,0:17:48.12:0,48,694	1/1:1,19:20:15.21:695,15,0	1/1:2,17:19:54.13:681,54,0	1/1:0,9:9:27.09:350,27,0
chr10	44918622	.	A	ACCTTCATAGAAG	4873.98	PASS	AB=1.000;AC=15;AF=0.278;AN=54;BaseQRankSum=2.541;DP=407;FS=0.000;HRun=0;HaplotypeScore=139.4928;InbreedingCoeff=0.8408;MQ=52.85;MQ0=1;MQRankSum=-8.164;QD=67.69;ReadPosRankSum=-1.856;VQSLOD=4.1448;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,1:6:12.04:473,12,0	0/0:13,0:13:39.09:0,39,1152	0/0:22,0:16:48.14:0,48,1595	0/0:13,0:7:18.06:0,18,550	1/1:3,2:8:6.02:211,6,0	0/0:18,0:18:48.15:0,48,1709	0/0:14,0:14:29.76:0,30,852	0/0:26,0:26:75.10:0,75,1849	0/0:18,0:18:48.14:0,48,1606	0/0:21,0:21:63.20:0,63,2248	0/0:25,0:25:72.20:0,72,2400	0/0:13,0:13:36.11:0,36,1263	0/0:18,0:18:45.14:0,45,1559	0/0:8,0:8:18.06:0,18,591	0/0:12,0:12:11.22:0,11,990	0/0:16,0:16:48.16:0,48,1774	0/0:31,0:29:55.21:0,55,2714	0/1:11,0:9:16.30:16,0,688	1/1:2,1:3:9.03:417,9,0	1/1:3,5:11:24.08:1075,24,0	./.	0/0:21,0:21:32.44:0,32,2331	0/0:24,0:24:66.18:0,66,2116	0/0:11,0:11:33.10:0,33,1175	0/0:10,0:9:30.10:0,30,1187	1/1:3,2:6:15.02:560,15,0	1/1:6,10:17:33.11:1767,33,0	1/1:1,1:3:6.02:355,6,0
chr10	44919689	.	AAC	A	3482.68	PASS	AB=0.513;AC=15;AF=0.268;AN=56;BaseQRankSum=13.636;DP=577;FS=5.822;HRun=0;HaplotypeScore=77.6030;InbreedingCoeff=0.8769;MQ=54.05;MQ0=12;MQRankSum=-7.925;QD=24.88;ReadPosRankSum=4.579;VQSLOD=4.0830;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,18:17:30.10:441,30,0	0/0:14,0:14:39.13:0,39,718	0/0:39,0:17:41.88:0,42,735	0/0:27,0:19:54.11:0,54,919	1/1:1,23:19:33.11:485,33,0	0/0:29,0:29:60.21:0,60,1145	0/0:11,0:9:24.08:0,24,460	0/0:28,0:27:78.27:0,78,1492	0/0:17,0:17:41.93:0,42,790	0/0:24,0:24:69.23:0,69,1293	0/0:23,0:23:60.21:0,60,1156	0/0:23,0:22:57.19:0,57,1072	0/0:13,0:13:36.12:0,36,677	0/0:14,0:14:36.11:0,36,636	0/0:19,0:19:51.15:0,51,935	0/0:22,0:22:60.21:0,60,1150	0/0:36,0:35:93.28:0,93,1747	0/0:15,0:15:42.14:0,42,809	1/1:0,7:7:21.07:309,21,0	1/1:2,22:20:54.18:788,54,0	1/1:2,4:5:3.01:44,3,0	0/0:20,0:20:54.10:0,54,926	0/0:34,0:34:84.25:0,84,1547	0/0:19,0:19:57.20:0,57,1099	0/0:9,0:9:24.08:0,24,463	0/1:1,19:16:15.80:530,0,16	1/1:1,21:17:39.05:574,39,0	1/1:0,18:15:21.07:311,21,0
chr10	44919861	.	TG	T	269.72	PASS	AC=2;AF=0.040;AN=50;BaseQRankSum=0.244;DP=465;FS=4.631;HRun=2;HaplotypeScore=53.8809;InbreedingCoeff=0.6286;MQ=47.15;MQ0=32;MQRankSum=-4.032;QD=10.37;ReadPosRankSum=-3.575;VQSLOD=0.2955;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:3,0:3:3.01:0,3,45	./.	./.	0/0:9,0:4:8.98:0,9,89	0/0:14,0:11:23.57:0,24,264	0/0:30,0:28:63.20:0,63,922	0/0:22,0:12:30.10:0,30,444	1/1:19,7:11:30.08:363,30,0	0/0:13,0:12:21.07:0,21,314	0/0:26,0:24:66.22:0,66,989	0/0:23,0:22:45.15:0,45,667	0/0:17,0:17:45.11:0,45,649	0/0:18,0:17:42.14:0,42,628	0/0:22,0:22:48.10:0,48,672	0/0:28,0:27:60.19:0,60,877	0/0:19,0:19:45.15:0,45,674	0/0:26,0:25:57.18:0,57,835	0/0:26,0:23:51.13:0,51,739	0/0:5,0:1:3.01:0,3,45	0/0:22,0:17:41.97:0,42,581	./.	0/0:20,0:19:45.15:0,45,672	0/0:21,0:19:48.16:0,48,719	0/0:18,0:18:39.12:0,39,561	0/0:13,0:12:30.10:0,30,450	0/0:12,0:8:18.06:0,18,269	0/0:10,0:4:12:0,12,154	0/0:7,0:3:6.02:0,6,89
chr10	44919926	.	A	AG	1198.22	PASS	AB=0.942;AC=14;AF=0.292;AN=48;BaseQRankSum=7.352;DP=543;FS=3.592;HRun=2;HaplotypeScore=40.6155;InbreedingCoeff=0.6260;MQ=32.30;MQ0=125;MQRankSum=-7.230;QD=10.33;ReadPosRankSum=1.912;VQSLOD=1.7899;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:11,1:2:3.01:48,3,0	0/0:12,0:6:9.03:0,9,126	./.	./.	1/1:3,12:11:18.06:286,18,0	0/0:32,0:24:36.11:0,36,460	0/0:25,0:3:6.02:0,6,84	./.	0/0:23,1:19:24.08:0,24,327	0/0:27,0:16:48.14:0,48,640	0/0:19,0:14:9.03:0,9,125	0/1:18,1:9:23.65:24,0,258	0/0:20,0:14:26.92:0,27,318	0/1:26,2:22:62.90:63,0,259	0/0:30,0:21:33.11:0,33,437	0/0:22,0:13:30.01:0,30,379	0/0:35,1:29:2.45:0,2,551	0/0:26,0:15:26.66:0,27,299	./.	1/1:2,8:7:15.05:238,15,0	0/0:12,0:4:6.02:0,6,84	0/0:17,0:16:21.07:0,21,292	0/0:23,0:20:45.15:0,45,624	0/0:20,0:18:27.09:0,27,376	0/0:18,0:10:24.08:0,24,335	1/1:3,6:5:15.05:230,15,0	1/1:3,11:9:27.09:427,27,0	1/1:4,5:2:3.01:48,3,0
chr10	44920107	.	TG	T	2934.58	PASS	AC=16;AF=0.320;AN=50;BaseQRankSum=10.961;DP=538;FS=7.050;HRun=4;HaplotypeScore=55.0823;InbreedingCoeff=0.9131;MQ=34.57;MQ0=115;MQRankSum=-0.453;QD=17.26;ReadPosRankSum=2.147;VQSLOD=2.6805;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:19,18:18:42.13:503,42,0	0/0:10,0:4:6.02:0,6,84	./.	./.	1/1:5,15:15:30.09:359,30,0	0/0:21,0:18:33.04:0,33,434	0/0:17,0:6:12.04:0,12,164	./.	0/0:24,0:21:39.06:0,39,511	0/0:33,0:26:78.19:0,78,1024	0/0:23,0:17:36.11:0,36,503	0/0:18,0:13:39.06:0,39,517	0/0:16,0:14:30.03:0,30,377	0/0:23,0:20:39.04:0,39,501	0/0:23,0:19:30.10:0,30,411	0/0:14,0:9:21.03:0,21,271	0/0:20,0:13:36.08:0,36,477	0/0:25,0:11:27.08:0,27,377	1/1:5,10:12:27.08:324,27,0	1/1:8,30:31:57.08:649,57,0	1/1:8,5:5:12.04:144,12,0	0/0:19,0:17:42.13:0,42,557	0/0:28,0:24:63.10:0,63,804	0/0:18,0:9:15.05:0,15,210	0/0:13,0:8:12.04:0,12,167	1/1:5,17:15:45.14:540,45,0	1/1:3,15:16:0.25:425,0,0	1/1:2,5:5:15.05:180,15,0
chr10	44920319	.	CAAAAAAAAAAAAAAA	C	4781.24	PASS	AC=12;AF=0.231;AN=52;BaseQRankSum=6.769;DP=376;FS=21.751;HRun=20;HaplotypeScore=150.3088;InbreedingCoeff=0.8520;MQ=54.58;MQ0=7;MQRankSum=-8.101;QD=56.92;ReadPosRankSum=7.003;VQSLOD=-0.0657;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,9:17:3.94:775,4,0	0/0:7,0:7:12.04:0,12,743	0/0:31,0:9:24.55:0,25,938	0/0:21,0:9:5.22:0,5,598	1/1:1,3:3:2.95:97,3,0	0/0:13,0:12:33.11:0,33,2054	0/0:9,0:9:27.09:0,27,1888	0/0:7,0:10:12.03:0,12,426	0/0:7,0:7:18.06:0,18,950	0/0:26,0:26:63.21:0,63,3082	0/0:18,0:17:33.11:0,33,2015	0/0:12,0:12:30.09:0,30,1542	0/0:3,0:3:9.03:0,9,430	0/0:10,0:10:21.07:0,21,1210	0/0:16,0:15:33.10:0,33,1629	0/0:8,0:8:21.04:0,21,1060	0/0:18,0:29:49.94:0,50,2448	0/0:10,0:10:7.23:0,7,1033	1/1:5,8:9:18.01:604,18,0	./.	1/1:1,6:7:12.04:463,12,0	0/0:9,0:13:30.09:0,30,1467	0/0:11,0:20:35.29:0,35,1562	0/0:9,0:13:24.12:0,24,787	0/0:13,0:12:27.06:0,27,1221	1/1:5,13:14:35.99:1107,36,0	1/1:2,21:22:44.86:1735,45,0	./.
chr10	44920405	.	CAA	C	5400.26	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=13.721;DP=512;FS=14.918;HRun=4;HaplotypeScore=83.2143;InbreedingCoeff=0.8925;MQ=53.81;MQ0=9;MQRankSum=-7.246;QD=33.33;ReadPosRankSum=1.256;VQSLOD=3.5513;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,15:15:30.10:457,30,0	0/0:5,0:2:5.99:0,6,80	0/0:29,0:12:13.09:0,13,488	0/1:25,0:13:57.03:57,0,414	1/1:0,17:17:45.15:684,45,0	0/0:22,0:22:63.20:0,63,1153	0/0:16,0:15:42.14:0,42,811	0/0:21,0:20:60.21:0,60,1156	0/0:18,0:18:51.17:0,51,984	0/0:32,0:31:93.32:0,93,1771	0/0:20,0:20:54.18:0,54,1007	0/0:11,0:11:33.11:0,33,637	0/0:16,0:16:48.16:0,48,915	0/0:13,0:13:39.13:0,39,748	0/0:15,0:15:45.15:0,45,870	0/0:6,0:6:18.06:0,18,348	0/0:32,0:31:84.29:0,84,1598	0/0:16,0:16:39.10:0,39,707	1/1:0,7:6:18.02:248,18,0	1/1:0,22:21:51.17:776,51,0	1/1:0,16:16:42.14:640,42,0	0/0:22,0:22:66.23:0,66,1263	0/0:27,0:27:72.25:0,72,1388	0/0:19,0:19:57.20:0,57,1097	0/0:10,0:10:30.10:0,30,578	1/1:0,23:22:60.20:887,60,0	1/1:0,27:27:81.28:1238,81,0	1/1:0,9:9:27.09:413,27,0
chr10	44920407	.	AAG	A	2676	PASS	AB=0.953;AC=17;AF=0.304;AN=56;BaseQRankSum=15.253;DP=517;FS=13.764;HRun=0;HaplotypeScore=92.7819;InbreedingCoeff=0.7521;MQ=53.80;MQ0=9;MQRankSum=-6.502;QD=13.94;ReadPosRankSum=1.511;VQSLOD=2.5054;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:15:29.86:240,30,0	0/0:5,0:2:3.01:0,3,58	0/1:27,1:12:15.84:16,0,471	0/1:22,3:13:99:116,0,404	1/1:17,0:17:45.01:402,45,0	0/0:22,0:22:60.21:0,60,1150	0/0:17,0:16:45.15:0,45,856	0/0:22,0:20:60.21:0,60,1158	0/0:17,0:17:51.17:0,51,944	0/0:34,0:33:99:0,99,1844	0/0:19,0:19:57.18:0,57,1055	0/0:11,0:11:33.11:0,33,624	0/0:16,0:16:48.16:0,48,925	0/0:13,0:13:39.13:0,39,753	0/0:15,0:15:45.15:0,45,869	0/0:6,0:6:18.06:0,18,346	0/0:32,0:31:84.29:0,84,1621	0/0:16,0:16:39.13:0,39,735	0/1:8,0:7:3.05:103,0,3	1/1:22,0:21:51.02:453,51,0	1/1:16,0:16:41.85:336,42,0	0/0:22,0:22:66.23:0,66,1273	0/0:28,0:28:72.25:0,72,1388	0/0:20,0:20:60.19:0,60,1124	0/0:10,0:10:30.10:0,30,578	1/1:23,0:22:58.89:416,59,0	1/1:29,0:28:58.61:598,59,0	1/1:9,0:9:26.81:197,27,0
chr10	44920734	.	T	TAAC	4894.71	PASS	AC=24;AF=0.500;AN=48;BaseQRankSum=12.110;DP=417;FS=6.407;HRun=0;HaplotypeScore=87.1676;InbreedingCoeff=0.9158;MQ=64.48;MQ0=11;MQRankSum=-11.976;QD=30.78;ReadPosRankSum=1.183;VQSLOD=5.0438;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,1:2:3.01:66,3,0	./.	0/0:19,0:15:45.11:0,45,700	0/0:21,0:16:41.95:0,42,650	1/1:7,12:19:21.07:433,21,0	0/0:31,0:31:87.27:0,87,1450	0/0:17,0:17:48.15:0,48,789	./.	0/0:25,0:25:69.22:0,69,1145	1/1:11,9:19:44.69:939,45,0	1/1:7,9:16:21.07:436,21,0	0/0:16,0:16:45.15:0,45,767	0/0:18,0:18:48.16:0,48,812	0/0:13,0:13:36.12:0,36,614	1/1:4,10:14:27.09:556,27,0	1/1:3,8:8:12.04:243,12,0	0/0:25,0:25:69.22:0,69,1143	1/1:1,3:4:6.02:113,6,0	1/1:4,0:1:3:25,3,0	1/1:1,13:14:12.04:261,12,0	./.	0/0:16,0:16:44.98:0,45,728	0/0:29,0:29:28:0,28,1058	0/0:18,0:18:42.13:0,42,689	1/1:2,13:14:33.11:686,33,0	1/1:5,8:9:27.09:596,27,0	1/1:9,16:23:27.09:542,27,0	./.
chr10	44920738	.	G	GACA	2677.64	PASS	AC=22;AF=0.478;AN=46;BaseQRankSum=10.212;DP=377;FS=1.286;HRun=0;HaplotypeScore=76.6832;InbreedingCoeff=0.8837;MQ=66.45;MQ0=19;MQRankSum=-10.284;QD=24.12;ReadPosRankSum=3.804;VQSLOD=3.7435;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,1:1:3.01:65,3,0	./.	0/0:23,0:16:44.51:0,45,765	0/0:22,0:16:38.78:0,39,615	1/1:0,11:12:12.04:250,12,0	0/0:31,0:31:90.29:0,90,1593	0/0:16,0:16:48.16:0,48,877	./.	0/0:25,0:25:65.92:0,66,1198	1/1:3,9:11:21.12:458,21,0	1/1:3,9:12:14.88:275,15,0	0/0:15,0:15:45.14:0,45,807	0/0:18,0:18:51.09:0,51,873	0/0:14,0:14:36.12:0,36,670	1/1:0,10:10:15.05:324,15,0	1/1:1,8:6:6.02:132,6,0	0/0:26,0:26:78.27:0,78,1408	1/1:0,3:3:6:90,6,0	./.	1/1:0,13:13:9.03:200,9,0	./.	0/0:16,0:16:45.15:0,45,834	0/0:24,0:24:66.23:0,66,1228	0/0:16,0:15:42.14:0,42,783	1/1:1,13:13:30.55:619,31,0	1/1:0,8:6:18.06:390,18,0	1/1:1,16:15:3.01:62,3,0	./.
chr10	44922479	.	GAAAA	G	4894.83	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=11.613;DP=542;FS=12.289;HRun=13;HaplotypeScore=109.8834;InbreedingCoeff=0.9655;MQ=74.61;MQ0=0;MQRankSum=-5.248;QD=29.85;ReadPosRankSum=6.095;VQSLOD=2.2298;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,28:32:72.17:1053,72,0	0/0:9,0:10:27.08:0,27,553	0/0:17,0:16:31.18:0,31,514	0/0:10,0:12:16.99:0,17,203	1/1:7,18:25:41.99:613,42,0	0/0:19,0:24:66.18:0,66,1374	0/0:13,0:14:39.13:0,39,865	0/0:29,0:29:69.23:0,69,1474	0/0:13,0:19:42.06:0,42,802	0/0:6,0:22:45.06:0,45,578	0/0:10,0:20:48.13:0,48,670	0/0:30,0:30:81.22:0,81,1559	0/0:11,0:13:33.03:0,33,659	0/0:15,0:17:39.13:0,39,790	0/0:8,0:24:57:0,57,688	0/0:6,0:14:30.09:0,30,449	0/0:6,0:23:33.11:0,33,609	0/0:2,0:9:20.96:0,21,227	1/1:6,12:18:35.94:502,36,0	1/1:4,16:21:46.32:661,46,0	1/1:0,9:9:17.74:263,18,0	0/0:25,0:26:63.22:0,63,1364	0/0:19,0:22:63.22:0,63,1275	0/0:11,0:12:36.04:0,36,787	0/0:3,0:19:42.01:0,42,557	1/1:6,20:27:22.73:750,23,0	1/1:4,26:30:69.17:1009,69,0	1/1:2,0:2:2.98:44,3,0
chr10	44922670	.	GA	G	5411.91	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=17.445;DP=645;FS=13.186;HRun=3;HaplotypeScore=114.0922;InbreedingCoeff=0.9972;MQ=81.28;MQ0=1;MQRankSum=-4.770;QD=26.02;ReadPosRankSum=0.342;VQSLOD=3.2455;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,39:43:94.46:1084,94,0	0/0:12,0:12:36.11:0,36,500	0/0:25,0:25:65.42:0,65,872	0/0:19,0:19:51.09:0,51,680	1/1:3,21:24:54.14:632,54,0	0/0:19,0:19:51.17:0,51,734	0/0:20,0:20:51.17:0,51,733	0/0:29,0:29:81.26:0,81,1133	0/0:33,0:33:99:0,99,1387	0/0:14,0:14:39.10:0,39,540	0/0:16,0:16:39.10:0,39,508	0/0:23,0:23:69.23:0,69,992	0/0:26,0:26:78.25:0,78,1104	0/0:25,0:25:75.24:0,75,1062	0/0:25,0:25:75.18:0,75,1050	0/0:17,0:17:48.15:0,48,674	0/0:32,0:32:93.22:0,93,1256	0/0:12,0:12:36.12:0,36,514	1/1:5,15:20:41.95:492,42,0	1/1:5,18:23:47.75:561,48,0	1/1:3,51:54:99:1325,111,0	0/0:18,0:18:54.18:0,54,767	0/0:18,0:18:51.17:0,51,733	0/0:26,0:26:78.26:0,78,1123	0/0:28,0:27:75.25:0,75,1077	1/1:2,12:14:15.10:349,15,0	1/1:3,17:20:51.16:610,51,0	1/1:0,10:10:30.09:360,30,0
chr10	44923384	.	ATTGGAGATG	A	7025.22	PASS	AB=0.641;AC=15;AF=0.268;AN=56;BaseQRankSum=12.320;DP=506;FS=1.425;HRun=0;HaplotypeScore=153.7502;InbreedingCoeff=0.8913;MQ=73.10;MQ0=0;MQRankSum=-12.521;QD=52.04;ReadPosRankSum=1.283;VQSLOD=4.8676;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,13:18:39.13:1036,39,0	0/0:10,0:10:24.08:0,24,1038	0/0:13,0:13:10.35:0,10,844	0/0:11,0:11:27.09:0,27,856	1/1:6,17:21:51.18:1441,51,0	0/0:19,0:19:48.16:0,48,2229	0/0:17,0:17:42.14:0,42,1782	0/0:33,0:33:90.28:0,90,3495	0/0:22,0:22:51.16:0,51,2158	0/0:23,0:23:60.21:0,60,2698	0/0:26,0:26:66.21:0,66,2807	0/0:18,0:18:45.15:0,45,2094	0/0:20,0:20:42.14:0,42,1943	0/0:16,0:16:39.13:0,39,1787	0/0:14,0:14:39.13:0,39,1770	0/0:21,0:21:60.21:0,60,2680	0/0:16,0:16:45.15:0,45,1900	0/0:15,0:15:42.14:0,42,1833	1/1:9,7:16:21.07:563,21,0	1/1:11,11:22:39.13:1083,39,0	1/1:7,4:11:21.04:385,21,0	0/0:15,0:15:39.12:0,39,1584	0/0:24,0:24:63.22:0,63,2606	0/0:7,0:7:15.05:0,15,682	0/0:31,0:31:90.31:0,90,4162	0/1:11,14:25:90.06:1248,0,90	1/1:5,10:15:33.11:921,33,0	1/1:1,4:5:12.04:348,12,0
chr10	44923413	.	AT	A	3466.50	PASS	AB=0.750;AC=17;AF=0.304;AN=56;BaseQRankSum=12.016;DP=500;FS=3.430;HRun=8;HaplotypeScore=93.3872;InbreedingCoeff=0.9039;MQ=66.73;MQ0=0;MQRankSum=-8.555;QD=23.42;ReadPosRankSum=-0.444;VQSLOD=3.8104;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,20:21:57.09:548,57,0	0/0:9,0:9:24.07:0,24,290	0/0:11,0:10:14.19:0,14,186	0/0:7,0:8:20.47:0,20,204	1/1:2,25:26:69.10:665,69,0	0/0:16,0:16:42.12:0,42,497	0/0:12,0:12:33.10:0,33,399	0/0:35,0:35:81.23:0,81,959	0/0:20,0:20:60.18:0,60,725	0/0:25,0:25:63.19:0,63,761	0/0:29,0:29:87.26:0,87,1040	0/0:17,0:17:51.16:0,51,615	0/0:15,0:15:42.13:0,42,507	0/0:18,0:18:48.13:0,48,561	0/0:15,0:15:45.14:0,45,544	0/0:20,0:20:57.17:0,57,688	0/0:1,0:14:37.38:0,37,190	0/0:11,0:11:30.09:0,30,362	1/1:3,19:22:54.06:514,54,0	1/1:1,15:16:45.07:433,45,0	1/1:3,7:10:18.02:172,18,0	0/0:20,0:20:60.18:0,60,722	0/0:24,0:24:66.19:0,66,786	0/1:4,2:6:39.90:40,0,127	0/0:32,0:32:78.24:0,78,942	1/1:5,15:20:11.83:398,12,0	1/1:0,18:18:51.08:492,51,0	1/1:0,8:8:21.03:203,21,0
chr10	44923805	.	TTTAG	T	6564.71	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=15.597;DP=630;FS=1.628;HRun=0;HaplotypeScore=115.2585;InbreedingCoeff=0.9901;MQ=78.23;MQ0=0;MQRankSum=-10.624;QD=37.51;ReadPosRankSum=1.449;VQSLOD=4.8643;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,17:24:39.06:652,39,0	0/0:12,0:12:30.09:0,30,719	0/0:26,0:26:69.21:0,69,1556	0/0:29,0:29:70.45:0,70,1582	1/1:4,21:25:48.05:751,48,0	0/0:25,0:25:69.24:0,69,1750	0/0:21,0:21:57.18:0,57,1431	0/0:20,0:20:54.18:0,54,1355	0/0:24,0:24:63.22:0,63,1620	0/0:29,0:29:87.29:0,87,2171	0/0:32,0:32:90.31:0,90,2335	0/0:25,0:25:75.23:0,75,1848	0/0:24,0:24:69.24:0,69,1768	0/0:21,0:21:54.18:0,54,1403	0/0:19,0:19:57.20:0,57,1475	0/0:17,0:17:51.18:0,51,1328	0/0:24,0:24:66.20:0,66,1663	0/0:18,0:18:51.17:0,51,1252	1/1:4,12:16:36.11:612,36,0	1/1:4,20:24:60.14:1000,60,0	1/1:3,18:21:33.11:565,33,0	0/0:29,0:29:81.26:0,81,2037	0/0:32,0:32:96.33:0,96,2422	0/0:4,0:4:9.03:0,9,234	0/0:24,0:24:69.22:0,69,1713	1/1:4,23:27:69.21:1201,69,0	1/1:0,25:25:66.23:1189,66,0	1/1:0,13:13:33.11:595,33,0
chr10	44924036	.	AGGGCACTTAATCCT	A	2318.92	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=7.730;DP=556;FS=0.000;HRun=0;HaplotypeScore=221.6796;InbreedingCoeff=0.7138;MQ=70.44;MQ0=0;MQRankSum=-3.289;QD=53.93;ReadPosRankSum=-3.869;VQSLOD=2.3361;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:57.17:0,57,3579	0/0:13,0:13:39.13:0,39,2223	0/0:21,0:21:63.20:0,63,3348	0/0:17,0:17:50.96:0,51,2778	0/0:23,0:23:69.22:0,69,3933	0/0:18,0:18:54.19:0,54,3409	0/0:21,0:21:63.20:0,63,3658	1/1:0,26:26:78.24:2413,78,0	0/0:12,0:12:36.12:0,36,2437	0/1:17,0:17:4.69:5,0,2584	0/0:27,0:27:76.49:0,76,4473	0/0:14,0:14:42.13:0,42,2535	0/0:19,0:19:57.18:0,57,3432	0/0:11,0:11:33.11:0,33,2208	0/0:13,0:13:39.13:0,39,2266	0/0:13,0:13:39.13:0,39,2281	0/0:20,0:20:60.19:0,60,3968	0/0:22,0:22:63.22:0,63,3574	0/0:22,0:22:66.21:0,66,3638	0/0:31,0:31:93.31:0,93,6102	0/0:21,0:21:63.20:0,63,4022	0/0:18,0:18:54.17:0,54,3654	0/0:26,0:26:78.27:0,78,4788	0/0:17,0:17:51.18:0,51,3368	0/0:20,0:20:52.50:0,52,3305	0/0:18,0:18:54.18:0,54,3563	0/0:38,0:38:99:0,114,7137	0/0:19,0:19:57.20:0,57,3693
chr10	44924204	.	G	GT	451.39	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-6.116;DP=598;FS=3.843;HRun=3;HaplotypeScore=70.9415;InbreedingCoeff=0.9995;MQ=80.10;MQ0=0;MQRankSum=-1.079;QD=32.24;ReadPosRankSum=1.059;VQSLOD=4.1056;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:42.13:0,42,503	1/1:0,14:14:39.13:546,39,0	0/0:22,0:22:51.05:0,51,565	0/0:30,0:31:44.53:0,45,466	0/0:20,0:20:60.17:0,60,708	0/0:22,0:22:66.19:0,66,779	0/0:17,0:17:51.16:0,51,612	0/0:27,0:27:78.20:0,78,920	0/0:14,0:14:42.11:0,42,492	0/0:31,0:31:84.24:0,84,996	0/0:26,0:26:75.19:0,75,874	0/0:16,0:16:45.12:0,45,527	0/0:12,0:12:36.11:0,36,431	0/0:20,0:20:54.17:0,54,648	0/0:25,0:25:75.23:0,75,900	0/0:16,0:16:45.11:0,45,517	0/0:22,0:22:66.20:0,66,790	0/0:15,0:15:37.93:0,38,437	0/0:19,0:19:57.17:0,57,684	0/0:45,0:45:99:0,132,1567	0/0:16,0:16:48.15:0,48,576	0/0:31,0:31:93.29:0,93,1115	0/0:21,0:21:51.14:0,51,600	0/0:13,0:13:39.10:0,39,456	0/0:18,0:18:54.16:0,54,638	0/0:30,0:30:87.26:0,87,1035	0/0:24,0:24:66.20:0,66,790	0/0:16,0:16:48.12:0,48,552
chr10	44924364	.	G	GA	7866.13	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-12.680;DP=666;FS=0.995;HRun=4;HaplotypeScore=64.0269;InbreedingCoeff=1.0000;MQ=70.13;MQ0=0;MQRankSum=-1.157;QD=37.28;ReadPosRankSum=1.255;VQSLOD=4.9591;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:57.16:0,57,644	1/1:1,18:19:54.18:737,54,0	0/0:31,0:30:78.20:0,78,862	0/0:24,0:24:66.02:0,66,728	0/0:31,0:31:84.22:0,84,943	0/0:27,0:27:78.22:0,78,884	0/0:18,0:18:48.13:0,48,543	1/1:1,19:20:57.17:747,57,0	0/0:20,0:20:57.16:0,57,647	1/1:1,26:27:78.25:1048,78,0	1/1:0,24:24:72.24:984,72,0	0/0:19,0:19:54.14:0,54,603	0/0:19,0:19:54.14:0,54,602	0/0:27,0:27:81.22:0,81,908	1/1:1,21:22:54.18:739,54,0	1/1:1,22:23:63.21:862,63,0	1/1:2,19:21:57.19:779,57,0	1/1:2,21:23:63.21:862,63,0	0/0:14,0:14:42.12:0,42,476	0/0:30,0:29:90.26:0,90,1020	0/0:24,0:24:69.18:0,69,773	0/0:33,0:33:96.21:0,96,1056	0/0:29,0:29:87.25:0,87,987	0/0:12,0:12:36.10:0,36,408	1/1:1,31:32:81.27:1108,81,0	0/0:32,1:33:58.23:0,58,1048	0/0:25,0:25:72.17:0,72,795	0/0:17,0:17:51.15:0,51,578
chr10	44924978	.	GGTGTGT	G	777.59	PASS	AB=0.944;AC=17;AF=0.354;AN=48;BaseQRankSum=2.935;DP=517;FS=1.031;HRun=0;HaplotypeScore=105.2025;InbreedingCoeff=0.5711;MQ=70.20;MQ0=13;MQRankSum=-4.176;QD=5.55;ReadPosRankSum=1.063;VQSLOD=1.7145;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:8.65:0,9,95	0/0:8,0:10:12.04:0,12,282	./.	./.	./.	0/0:7,0:15:3.01:0,3,78	0/0:17,0:22:18.05:0,18,393	0/0:21,0:21:6.02:0,6,76	1/1:12,4:16:9.03:160,9,0	0/0:23,0:23:15.93:0,16,286	0/0:10,0:12:6.02:0,6,121	0/1:16,1:17:48.83:142,0,49	1/1:9,4:14:9.03:162,9,0	1/1:13,0:13:3:28,3,0	0/0:22,0:23:27.06:0,27,507	0/0:15,0:24:9.02:0,9,208	0/0:10,0:16:18.06:0,18,407	0/0:9,0:7:15.05:0,15,328	./.	1/1:9,0:12:1.77:4,2,0	0/0:28,0:28:5.36:0,5,51	1/1:15,4:18:6:120,6,0	1/1:6,10:16:8.45:141,8,0	1/1:15,3:18:3.01:60,3,0	0/0:18,0:18:21.06:0,21,511	0/0:10,0:12:7.14:0,7,68	1/1:12,3:14:4.74:115,5,0	0/0:5,0:6:2.07:0,2,22
chr10	44927071	.	A	AT	2749.51	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-4.143;DP=625;FS=7.798;HRun=6;HaplotypeScore=50.7235;InbreedingCoeff=0.9243;MQ=42.89;MQ0=49;MQRankSum=-2.930;QD=21.31;ReadPosRankSum=1.744;VQSLOD=2.4817;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:34:60.07:0,60,598	0/0:13,0:12:30.03:0,30,294	0/0:1,0:1:3.01:0,3,31	0/0:7,0:3:2.13:0,2,43	0/0:48,0:43:60.13:0,60,611	0/0:34,0:31:63.14:0,63,637	0/0:18,0:14:30.02:0,30,295	0/0:29,0:14:30.01:0,30,290	0/0:23,0:23:45.10:0,45,459	1/1:2,15:15:42.13:528,42,0	1/1:3,11:10:12:131,12,0	0/0:21,0:19:45.08:0,45,451	0/0:16,0:16:30.07:0,30,305	0/0:28,0:28:69.14:0,69,696	1/1:2,11:10:30.10:377,30,0	1/1:1,15:16:39.12:490,39,0	1/1:13,21:24:54.09:658,54,0	1/1:6,15:17:17.55:535,18,0	0/0:16,0:10:30.07:0,30,305	0/0:35,0:29:69.10:0,69,685	0/0:20,0:20:44.34:0,44,444	0/0:34,0:31:57.04:0,57,560	0/0:22,0:19:23.91:0,24,244	0/0:27,0:21:39.08:0,39,396	1/1:1,13:11:18.06:224,18,0	0/0:16,0:11:33.02:0,33,325	0/0:33,0:31:66.11:0,66,661	0/0:13,0:11:27.06:0,27,275
chr10	44927261	.	C	CTA	4193.93	PASS	AC=14;AF=0.269;AN=52;BaseQRankSum=-5.254;DP=622;FS=6.277;HRun=0;HaplotypeScore=67.9220;InbreedingCoeff=0.9885;MQ=39.41;MQ0=58;MQRankSum=-9.358;QD=40.72;ReadPosRankSum=3.109;VQSLOD=5.6731;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:35:44.97:0,45,688	0/0:9,0:9:27.09:0,27,413	./.	./.	0/0:29,0:26:54.16:0,54,802	0/0:30,0:24:27.09:0,27,412	0/0:15,0:10:21.07:0,21,321	0/0:33,1:11:27.05:0,27,380	0/0:27,0:22:42.10:0,42,598	1/1:0,17:16:48.16:911,48,0	1/1:1,22:22:57.20:1094,57,0	0/0:22,1:19:36.12:0,36,543	0/0:26,0:17:24.08:0,24,367	0/0:31,0:26:42.14:0,42,638	1/1:2,9:9:21.07:399,21,0	1/1:0,13:12:33.11:634,33,0	1/1:7,7:9:15.05:288,15,0	1/1:6,4:4:12.04:231,12,0	0/0:21,0:10:30.10:0,30,459	0/0:34,0:34:93.29:0,93,1397	0/0:30,0:21:51.17:0,51,780	0/0:34,0:32:69.23:0,69,1034	0/0:25,0:22:39.13:0,39,583	0/0:29,1:22:36.12:0,36,551	1/1:2,13:14:33.11:635,33,0	0/0:22,0:18:51.16:0,51,759	0/0:35,0:32:60.16:0,60,881	0/0:25,1:18:42.14:0,42,643
chr10	44931446	.	TCA	T	417	PASS	AB=0.984;AC=9;AF=0.167;AN=54;BaseQRankSum=1.292;DP=641;FS=2.259;HRun=0;HaplotypeScore=104.4240;InbreedingCoeff=0.1076;MQ=45.48;MQ0=52;MQRankSum=2.048;QD=2.23;ReadPosRankSum=1.262;VQSLOD=1.9702;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:31:56.37:0,56,552	./.	0/0:45,0:3:8.89:0,9,64	0/0:41,0:4:11.84:0,12,78	0/0:27,0:27:46.44:0,46,413	0/1:17,0:17:12.03:12,0,86	0/0:26,1:27:9.22:0,9,446	0/1:26,0:24:16.75:17,0,343	0/0:20,0:20:24:0,24,268	0/0:31,0:31:30.66:0,31,391	0/0:20,0:20:3.31:0,3,44	0/0:9,0:9:20.90:0,21,165	0/0:14,0:14:20.95:0,21,174	0/0:20,0:19:21.01:0,21,217	0/0:14,0:12:12.19:0,12,77	0/1:15,1:16:10.47:10,0,110	1/1:28,10:35:21.81:488,22,0	0/1:10,0:7:0.10:0,0,94	0/0:22,0:17:13.06:0,13,276	0/0:21,0:20:46.55:0,47,487	0/1:46,0:43:2.97:3,0,506	0/1:15,0:15:0.73:1,0,183	0/1:18,1:19:8.77:9,0,207	0/0:26,0:26:39.05:0,39,430	0/0:19,0:19:17.63:0,18,152	0/0:17,0:16:39.04:0,39,448	0/0:27,0:25:43.79:0,44,489	0/0:13,0:13:23.49:0,23,222
chr10	44931467	.	C	CAG	3001.04	PASS	AB=0.838;AC=25;AF=0.481;AN=52;BaseQRankSum=-2.979;DP=612;FS=9.718;HRun=0;HaplotypeScore=102.7705;InbreedingCoeff=-0.2830;MQ=45.53;MQ0=39;MQRankSum=1.911;QD=6.61;ReadPosRankSum=0.359;VQSLOD=2.6880;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:33,9:38:14.33:427,14,0	./.	0/0:23,0:4:2.98:0,3,21	./.	0/1:23,4:25:18.49:200,0,18	0/0:13,0:13:9.01:0,9,95	0/0:24,0:23:35.88:0,36,348	0/0:31,0:22:16.18:0,16,228	0/1:8,13:22:44.16:128,0,44	0/1:32,0:29:72.56:92,0,73	0/1:23,0:22:4.44:37,0,4	1/1:9,0:9:2.99:23,3,0	0/1:9,8:17:5.08:41,0,5	0/1:9,14:22:26.44:86,0,26	1/1:9,0:9:1.66:61,2,0	0/1:15,0:14:6.22:93,0,6	0/0:34,0:31:17.01:0,17,166	0/1:9,0:6:1.30:11,0,1	0/1:25,0:17:8.16:128,0,8	0/1:15,6:18:1.99:290,0,2	0/1:31,4:30:81.80:136,0,82	0/1:7,9:16:23.50:103,0,23	0/1:10,11:21:56.37:78,0,56	0/1:15,11:25:14.11:479,0,14	0/1:16,0:15:10.80:11,0,18	1/1:11,5:14:4.45:275,4,0	0/1:19,8:24:18.30:326,0,18	0/1:22,0:18:17.36:128,0,17
chr10	44931485	.	GAGAC	G	1319.24	PASS	AB=1.000;AC=16;AF=0.286;AN=56;BaseQRankSum=1.685;DP=557;FS=2.719;HRun=0;HaplotypeScore=125.4788;InbreedingCoeff=0.2393;MQ=45.53;MQ0=41;MQRankSum=0.653;QD=5.24;ReadPosRankSum=-5.412;VQSLOD=0.6964;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:45,0:41:80.82:81,0,271	1/1:5,0:5:2.96:19,3,0	0/0:4,0:2:5.23:0,5,69	0/0:17,0:1:3.01:0,3,34	0/0:27,0:25:19.38:0,19,211	0/0:14,0:14:5.85:0,6,147	0/0:20,0:18:36.01:0,36,658	0/0:30,0:15:30.03:0,30,506	0/0:22,0:22:29.82:0,30,420	1/1:26,0:22:5.57:177,6,0	0/0:16,2:17:2.66:0,3,6	0/0:8,0:8:8.95:0,9,81	0/0:16,0:16:8.96:0,9,154	0/0:22,0:21:6.02:0,6,118	0/0:8,0:7:0.89:0,1,2	0/0:11,1:11:4.88:0,5,12	1/1:32,0:29:47.99:619,48,0	1/1:8,0:5:5.05:38,5,0	0/1:22,0:15:97.31:97,0,150	0/1:24,0:21:94.17:94,0,114	0/1:29,0:23:55.74:56,0,319	0/0:16,0:16:23.79:0,24,352	0/0:26,0:24:32.76:0,33,414	0/0:27,0:26:63.08:0,63,1057	1/1:9,2:10:8.93:91,9,0	0/1:22,0:21:99:152,0,274	0/1:28,0:26:57.72:58,0,212	0/0:18,0:14:0.79:0,1,240
chr10	44931487	.	GAC	G	2961.73	PASS	AB=0.973;AC=25;AF=0.446;AN=56;BaseQRankSum=4.017;DP=557;FS=4.496;HRun=0;HaplotypeScore=110.6370;InbreedingCoeff=0.2173;MQ=45.24;MQ0=43;MQRankSum=2.006;QD=8.61;ReadPosRankSum=-4.619;VQSLOD=2.4388;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:44,2:42:26.66:225,0,27	1/1:4,1:5:2.96:19,3,0	0/0:4,0:2:5.23:0,5,52	0/0:16,0:1:3.01:0,3,31	0/1:26,1:25:33.31:131,0,33	0/0:15,0:15:11.98:0,12,165	0/0:20,0:18:49.46:0,49,617	0/0:30,0:14:25.29:0,25,450	0/0:23,0:23:29.77:0,30,280	1/1:9,17:22:60.01:754,60,0	1/1:6,13:18:12.04:180,12,0	0/1:8,0:8:11.06:11,0,50	0/0:14,0:14:8.96:0,9,105	0/0:22,0:21:8.98:0,9,84	1/1:4,4:7:9.02:113,9,0	1/1:4,8:11:1.18:165,1,0	1/1:22,8:27:19.69:512,20,0	1/1:7,1:5:8.61:82,9,0	0/1:22,0:14:9.55:134,0,10	0/1:22,2:21:7.41:180,0,7	0/1:29,0:23:62.01:105,0,62	0/0:17,0:17:6.52:0,7,216	0/0:25,0:23:25.32:0,25,294	0/0:27,0:26:33.03:0,33,549	1/1:9,1:9:11.85:99,12,0	0/1:24,0:23:39.34:241,0,39	0/1:28,1:27:46.81:121,0,47	0/1:16,1:13:42.03:73,0,42
chr10	44931521	.	CAG	C	315.20	PASS	AB=0.889;AC=9;AF=0.180;AN=50;BaseQRankSum=5.201;DP=531;FS=14.091;HRun=0;HaplotypeScore=113.2363;InbreedingCoeff=0.6624;MQ=46.12;MQ0=40;MQRankSum=-5.217;QD=7.69;ReadPosRankSum=-0.444;VQSLOD=2.4399;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:39:60.20:0,60,933	1/1:0,2:2:5.61:49,6,0	./.	0/0:22,0:3:1.55:0,2,4	0/0:25,1:23:30.10:0,30,494	0/0:17,0:17:18:0,18,276	0/0:20,0:19:48.16:0,48,785	0/0:31,0:13:39.08:0,39,579	0/0:21,0:21:30.10:0,30,500	1/1:8,7:12:21.07:265,21,0	./.	0/0:11,0:11:27.08:0,27,422	0/0:18,0:18:18.05:0,18,266	0/0:15,0:14:4.32:0,4,97	./.	1/1:2,1:2:3.01:34,3,0	0/0:24,0:22:57.02:0,57,846	0/1:7,1:6:40.20:65,0,40	0/0:19,0:13:36.08:0,36,541	0/0:19,0:16:32.96:0,33,448	0/0:20,0:18:36.12:0,36,596	0/0:22,0:22:39.13:0,39,635	0/0:23,0:22:39.13:0,39,627	0/0:27,0:27:57.12:0,57,895	1/1:4,9:13:3.01:38,3,0	0/0:26,0:24:69.22:0,69,1108	0/0:33,0:31:64.37:0,64,915	0/0:21,0:15:36.12:0,36,599
chr10	44931539	.	GAC	G	1502.41	PASS	AB=0.994;AC=21;AF=0.389;AN=54;BaseQRankSum=10.018;DP=547;FS=6.998;HRun=0;HaplotypeScore=110.7627;InbreedingCoeff=0.5073;MQ=50.17;MQ0=18;MQRankSum=3.791;QD=5.42;ReadPosRankSum=7.188;VQSLOD=1.0159;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:40,0:40:6.08:205,0,6	0/0:6,0:6:14.65:0,15,161	0/0:20,0:7:16.02:0,16,170	0/0:27,0:12:19.42:0,19,184	1/1:24,0:22:27.13:124,27,0	0/0:18,0:18:21:0,21,368	0/0:18,0:17:47.85:0,48,750	0/0:34,0:23:66.18:0,66,1091	0/0:22,0:22:44.05:0,44,745	1/1:10,0:10:5.33:102,5,0	1/1:18,0:17:8.29:37,8,0	0/0:12,0:12:30.10:0,30,571	0/0:16,0:16:21.06:0,21,372	0/0:17,0:17:12.04:0,12,227	./.	0/0:2,2:4:2.50:0,2,9	0/1:29,1:28:22.22:199,0,22	0/1:10,0:7:20.62:21,0,77	1/1:17,0:14:2.94:111,3,0	1/1:18,1:19:34.41:214,34,0	0/1:20,0:18:51.03:83,0,51	0/0:22,0:22:48.13:0,48,851	0/0:23,0:23:56.66:0,57,871	0/0:23,0:23:60.19:0,60,1101	1/1:14,0:14:3.27:15,3,0	1/1:25,0:24:16.36:226,16,0	1/1:28,0:27:38.30:284,38,0	0/1:22,0:17:69.39:69,0,74
chr10	44931541	.	CAG	C	5155.25	PASS	AB=0.833;AC=27;AF=0.500;AN=54;BaseQRankSum=7.822;DP=548;FS=3.979;HRun=0;HaplotypeScore=98.6811;InbreedingCoeff=0.8618;MQ=50.47;MQ0=18;MQRankSum=3.287;QD=18.22;ReadPosRankSum=5.438;VQSLOD=4.8464;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,32:40:57.15:690,57,0	0/0:6,0:6:14.79:0,15,114	0/0:20,0:7:20.23:0,20,234	0/0:27,0:12:17.80:0,18,227	1/1:3,20:22:32.67:389,33,0	0/0:18,0:18:18.02:0,18,284	0/0:18,0:17:36.12:0,36,566	0/0:35,0:25:69.16:0,69,1007	0/0:20,1:21:25.27:0,25,635	1/1:1,7:8:21.07:260,21,0	1/1:10,8:17:9.03:111,9,0	0/0:12,0:12:30.10:0,30,479	0/0:16,0:16:21.07:0,21,341	0/0:17,0:17:12.04:0,12,186	./.	1/1:4,1:5:3:25,3,0	1/1:6,24:28:45.07:539,45,0	0/1:8,2:7:36.02:59,0,36	1/1:5,13:15:36.10:433,36,0	1/1:3,16:19:36.10:435,36,0	1/1:6,14:18:11.75:316,12,0	0/0:23,0:23:45.15:0,45,726	0/0:23,0:23:54.13:0,54,804	0/0:22,0:22:57.19:0,57,901	1/1:1,14:15:6.01:64,6,0	1/1:2,23:24:48.18:830,48,0	1/1:3,26:28:57.17:706,57,0	1/1:11,11:17:24.07:297,24,0
chr10	44931563	.	GAC	G	102.32	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=1.975;DP=577;FS=1.512;HRun=0;HaplotypeScore=118.9765;InbreedingCoeff=0.7000;MQ=52.81;MQ0=9;MQRankSum=-2.854;QD=17.05;ReadPosRankSum=-0.892;VQSLOD=3.7467;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:72.07:0,72,929	1/1:1,5:6:15.05:191,15,0	0/0:30,0:14:9.52:0,10,352	0/0:32,0:17:23.11:0,23,338	0/0:25,0:23:36.12:0,36,507	0/0:20,1:21:1.15:0,1,585	0/0:18,0:18:42.11:0,42,638	0/0:36,0:32:72.25:0,72,1204	0/0:21,0:21:54.18:0,54,876	0/0:11,0:11:26.98:0,27,268	0/0:21,0:21:42.07:0,42,624	0/0:14,0:14:39.13:0,39,597	0/0:12,0:12:32.05:0,32,521	0/0:20,0:20:42.14:0,42,668	0/0:8,0:5:9.03:0,9,148	0/0:5,0:5:12.04:0,12,197	0/0:31,0:29:52.17:0,52,572	0/0:11,0:9:18.85:0,19,193	0/0:19,0:19:48.12:0,48,616	0/0:22,0:22:53.05:0,53,670	0/0:14,0:13:27.07:0,27,340	0/0:22,0:21:45.15:0,45,747	0/0:22,0:22:60.14:0,60,960	0/0:20,0:20:45.13:0,45,699	0/0:19,0:18:18:0,18,255	0/0:26,0:26:66.18:0,66,900	0/0:33,0:33:79.02:0,79,922	0/0:17,0:15:30.09:0,30,411
chr10	44933251	.	GA	G	3013.33	PASS	AB=0.917;AC=15;AF=0.268;AN=56;BaseQRankSum=14.483;DP=571;FS=0.784;HRun=9;HaplotypeScore=68.4191;InbreedingCoeff=0.8971;MQ=67.24;MQ0=0;MQRankSum=-1.075;QD=20.36;ReadPosRankSum=1.749;VQSLOD=4.3279;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:72.21:0,72,828	0/0:6,0:6:12.04:0,12,139	0/0:7,0:7:4.91:0,5,88	0/1:10,1:11:6.83:7,0,142	0/0:40,0:41:99:0,111,1258	0/0:27,0:27:78.23:0,78,900	0/0:12,0:12:36.11:0,36,416	0/0:38,0:38:65.92:0,66,994	0/0:21,0:21:54.14:0,54,606	1/1:0,23:23:69.02:628,69,0	1/1:3,18:21:54.02:494,54,0	0/0:17,0:17:45.13:0,45,519	0/0:19,0:20:50.98:0,51,568	0/0:20,0:20:57.17:0,57,658	1/1:3,20:23:63.02:573,63,0	1/1:0,15:15:36.02:330,36,0	1/1:1,17:18:42.02:384,42,0	1/1:3,15:18:39.02:357,39,0	0/0:15,0:15:42.12:0,42,485	0/0:27,0:28:78.05:0,78,871	0/0:14,0:16:44.77:0,45,457	0/0:26,0:26:75.21:0,75,854	0/0:28,0:28:78.21:0,78,886	0/0:10,0:10:27.08:0,27,312	1/1:1,18:19:48.02:439,48,0	0/0:18,1:19:26.68:0,27,554	0/0:29,0:29:81.21:0,81,914	0/0:15,0:17:47.97:0,48,534
chr10	44934196	.	GT	G	7496.75	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=12.170;DP=488;FS=4.525;HRun=9;HaplotypeScore=48.3139;InbreedingCoeff=0.9961;MQ=68.24;MQ0=0;MQRankSum=-1.189;QD=24.50;ReadPosRankSum=3.024;VQSLOD=5.6502;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,26:27:72.04:659,72,0	1/1:0,8:8:24.01:220,24,0	0/0:6,0:6:15.04:0,15,161	0/0:9,0:9:20.25:0,20,198	1/1:1,25:26:75:677,75,0	0/0:12,0:12:30.08:0,30,336	0/0:17,0:17:45.12:0,45,510	0/0:32,0:32:72.20:0,72,814	0/0:17,0:17:48.13:0,48,546	1/1:3,21:24:60:545,60,0	1/1:2,19:21:51.02:467,51,0	0/0:16,0:16:38.94:0,39,450	0/0:10,0:10:30.09:0,30,346	0/0:12,0:12:36.11:0,36,415	1/1:0,9:9:27.01:247,27,0	1/1:0,10:10:30.02:275,30,0	1/1:1,26:27:69.03:632,69,0	1/1:0,10:9:24.01:220,24,0	1/1:3,17:20:51.02:467,51,0	1/1:0,28:28:78:706,78,0	1/1:2,20:22:51.02:467,51,0	0/0:14,0:14:39.12:0,39,450	0/0:24,0:24:63.19:0,63,727	0/0:13,0:13:36.11:0,36,415	1/1:1,17:18:45.02:412,45,0	1/1:0,15:15:45:406,45,0	1/1:0,26:26:75.04:686,75,0	1/1:0,15:15:45.02:412,45,0
chr10	44935829	.	G	GTT	2523.59	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=10.085;DP=669;FS=5.585;HRun=2;HaplotypeScore=161.4738;InbreedingCoeff=0.8978;MQ=66.84;MQ0=4;MQRankSum=-4.661;QD=18.29;ReadPosRankSum=-0.821;VQSLOD=0.9670;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:84.16:0,84,1125	0/0:8,0:8:24.03:0,24,302	0/0:39,0:31:74.96:0,75,919	0/0:41,0:32:78.48:0,78,979	0/0:30,0:30:84.22:0,84,1132	0/0:15,0:15:42.13:0,42,590	0/0:18,0:18:54.13:0,54,716	0/0:42,0:42:99:0,120,1464	0/0:26,0:26:68.67:0,69,525	1/1:18,0:18:54.05:640,54,0	1/1:27,1:27:68.20:679,68,0	0/0:25,0:25:65.60:0,66,489	0/0:18,0:18:50.75:0,51,385	0/0:13,0:13:29.84:0,30,225	1/1:22,0:22:33.10:403,33,0	1/1:14,1:16:6.44:256,6,0	0/1:22,0:22:6:28,0,6	1/1:8,3:11:15.05:237,15,0	0/0:28,0:27:78.21:0,78,1042	0/0:19,0:19:54.17:0,54,754	0/0:20,0:20:51.09:0,51,665	0/0:24,0:24:62.67:0,63,472	0/0:28,0:28:62.68:0,63,474	0/0:26,0:26:68.27:0,68,507	1/1:21,0:20:39.12:466,39,0	0/0:35,0:35:55.55:0,56,1299	0/0:30,0:30:75.19:0,75,1014	0/0:12,0:12:33.11:0,33,485
chr10	44935830	.	TTC	T	4502.22	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=-5.959;DP=697;FS=1.766;HRun=0;HaplotypeScore=163.6084;InbreedingCoeff=0.8793;MQ=66.02;MQ0=4;MQRankSum=0.778;QD=24.87;ReadPosRankSum=4.387;VQSLOD=5.8131;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:71.90:0,72,854	0/0:8,0:8:24.08:0,24,380	0/0:38,0:29:54.10:0,54,782	0/0:43,0:32:51.42:0,51,791	0/0:30,0:30:74.27:0,74,905	0/0:15,0:15:42.12:0,42,627	0/0:18,0:18:42.14:0,42,693	0/0:43,0:43:84.24:0,84,1325	1/1:6,20:26:57.18:710,57,0	0/0:4,0:22:26.58:0,27,375	0/0:6,0:33:0.61:0,1,85	1/1:4,21:25:63.20:788,63,0	1/1:4,14:18:45.14:560,45,0	1/1:1,11:12:27.09:338,27,0	0/0:5,0:26:11.06:0,11,102	0/1:7,0:22:4.55:5,0,91	0/0:4,0:22:33.02:0,33,292	0/0:4,0:12:12.48:0,12,108	0/0:28,0:27:63.04:0,63,853	0/0:19,0:19:51.08:0,51,632	0/0:21,0:21:39.04:0,39,466	1/1:2,22:24:57.18:713,57,0	1/1:6,22:28:54.17:676,54,0	1/1:5,21:26:57.18:713,57,0	0/0:1,0:24:24:0,24,208	0/0:33,0:34:81.60:0,82,923	0/0:30,0:30:65.89:0,66,708	0/0:12,0:12:33.06:0,33,468
chr10	44935846	.	TTCTA	T	3867.04	PASS	AB=0.884;AC=19;AF=0.339;AN=56;BaseQRankSum=-0.926;DP=703;FS=0.000;HRun=0;HaplotypeScore=180.6370;InbreedingCoeff=0.4510;MQ=59.03;MQ0=9;MQRankSum=3.523;QD=11.51;ReadPosRankSum=3.564;VQSLOD=2.6860;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,29:42:36.12:562,36,0	0/0:5,0:10:9.01:0,9,128	0/0:43,0:24:20.73:0,21,328	0/0:36,0:23:11.99:0,12,198	1/1:12,16:29:38.97:493,39,0	0/1:16,1:17:14.80:15,0,605	0/0:20,0:20:36.11:0,36,734	0/0:34,0:34:35.98:0,36,554	0/1:29,0:29:43.32:43,0,847	0/0:24,0:24:6.68:0,7,1037	0/0:26,0:25:27.09:0,27,495	0/0:24,0:24:54.18:0,54,810	0/1:20,0:20:44.66:45,0,561	0/0:14,0:14:33.11:0,33,530	0/0:27,0:26:36.12:0,36,634	0/0:20,0:20:27.56:0,28,488	0/0:18,0:18:36.12:0,36,818	0/0:12,0:13:18.73:0,19,259	1/1:22,5:24:21.04:332,21,0	0/1:9,12:21:11.02:291,0,11	1/1:6,15:21:21.07:335,21,0	0/1:33,0:33:35.97:36,0,915	0/0:29,0:29:48.16:0,48,761	0/0:29,0:29:63.20:0,63,974	0/1:24,0:23:13.60:14,0,622	0/1:12,21:34:2.51:934,0,3	1/1:8,19:27:39.13:623,39,0	1/1:8,4:12:9.03:144,9,0
chr10	44937446	.	T	TA	3568.91	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=11.801;DP=633;FS=1.891;HRun=5;HaplotypeScore=77.1962;InbreedingCoeff=0.9979;MQ=53.84;MQ0=8;MQRankSum=-4.360;QD=26.24;ReadPosRankSum=1.305;VQSLOD=3.4714;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:22:69.17:0,69,741	0/0:13,0:13:36.09:0,36,387	0/0:9,0:8:24.06:0,24,255	0/0:14,0:11:30.07:0,30,318	0/0:31,0:31:78.19:0,78,837	0/0:31,0:31:75.18:0,75,805	0/0:23,0:22:60.11:0,60,632	0/0:28,0:28:75.17:0,75,799	0/0:33,0:33:96.22:0,96,1021	1/1:3,21:24:57.15:729,57,0	1/1:0,19:15:36.12:472,36,0	0/0:20,0:20:54.12:0,54,572	0/0:23,0:23:66.16:0,66,708	0/0:22,0:22:63.16:0,63,677	1/1:0,21:21:45.15:592,45,0	1/1:0,21:20:36.12:474,36,0	1/1:1,11:10:18.06:237,18,0	1/1:1,17:18:51.17:671,51,0	0/0:23,0:20:60.15:0,60,645	0/0:26,0:26:66.12:0,66,697	0/0:26,0:26:66.16:0,66,709	0/0:27,0:27:66.16:0,66,709	0/0:26,0:26:72.18:0,72,772	0/0:20,0:20:57.14:0,57,612	1/1:3,18:15:30.10:395,30,0	0/0:31,0:31:84.16:0,84,877	0/0:30,0:29:81.20:0,81,870	0/0:18,0:18:51.13:0,51,547
chr10	44938022	.	A	AG	836.02	PASS	AC=14;AF=0.269;AN=52;BaseQRankSum=1.243;DP=576;FS=5.600;HRun=7;HaplotypeScore=62.8579;InbreedingCoeff=0.8041;MQ=27.29;MQ0=250;MQRankSum=-2.116;QD=5.16;ReadPosRankSum=1.072;VQSLOD=-0.2035;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:20:39.01:0,39,366	0/0:7,0:6:9.01:0,9,87	./.	./.	0/0:9,0:8:12.02:0,12,116	0/0:14,0:6:6.01:0,6,58	0/0:35,0:14:21.03:0,21,203	0/0:16,0:6:18.03:0,18,174	1/1:10,23:19:12.04:145,12,0	0/0:18,0:12:21.03:0,21,203	0/0:10,0:7:5.96:0,6,58	1/1:9,21:19:15.05:179,15,0	1/1:4,17:10:12.04:145,12,0	1/1:8,24:13:6:72,6,0	0/0:23,0:9:5.99:0,6,58	0/0:18,0:6:6.01:0,6,58	0/0:27,0:15:14.97:0,15,135	0/0:26,0:15:20.98:0,21,193	0/0:18,0:3:9.01:0,9,87	0/0:9,0:8:12.01:0,12,116	0/0:56,0:28:12.01:0,12,116	1/1:1,10:11:12.04:145,12,0	1/1:3,4:7:6.02:72,6,0	1/1:4,24:19:21.06:254,21,0	0/0:14,0:13:18.03:0,18,174	0/0:24,0:9:15.02:0,15,145	0/0:21,0:6:9:0,9,87	0/0:11,0:6:15.02:0,15,145
chr10	44939474	.	T	TTA	926.28	PASS	AB=0.578;AC=12;AF=0.214;AN=56;BaseQRankSum=4.762;DP=595;FS=40.891;HRun=0;HaplotypeScore=99.3837;InbreedingCoeff=0.1369;MQ=67.12;MQ0=2;MQRankSum=0.263;QD=3.88;ReadPosRankSum=-2.482;VQSLOD=0.2893;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:3,0:31:34.20:0,34,178	0/0:1,0:11:33.06:0,33,328	0/0:18,0:13:13.11:0,13,245	0/0:18,0:14:35.57:0,36,332	0/0:9,0:36:10.51:0,11,222	0/0:16,0:16:42.05:0,42,599	0/0:10,0:13:33.03:0,33,453	0/0:20,0:19:50.22:0,50,704	0/0:18,0:19:51.05:0,51,721	0/1:8,0:21:87.73:88,0,128	0/1:2,1:20:7.17:165,0,7	0/0:17,0:18:48.05:0,48,626	0/0:13,0:13:32.90:0,33,397	0/0:22,0:23:57.06:0,57,772	0/1:2,0:20:27.41:138,0,27	1/1:2,1:22:4.85:143,5,0	0/0:7,0:20:32.11:0,32,318	1/1:2,0:32:9.85:291,10,0	0/1:11,0:29:2.25:2,0,345	0/1:9,0:37:76.15:76,0,240	0/1:5,0:11:30.85:31,0,84	0/0:12,0:12:20.82:0,21,236	0/0:15,0:16:35.94:0,36,484	0/0:29,0:29:84.25:0,84,1304	0/1:3,0:27:14.28:107,0,14	0/1:6,0:20:36.58:37,0,104	0/0:8,0:30:12.75:0,13,248	0/0:2,0:11:14.36:0,14,76
chr10	44939639	.	GC	G	4677.18	PASS	AB=0.516;AC=13;AF=0.232;AN=56;BaseQRankSum=6.824;DP=514;FS=7.677;HRun=1;HaplotypeScore=66.4800;InbreedingCoeff=0.9085;MQ=71.05;MQ0=0;MQRankSum=-0.313;QD=33.89;ReadPosRankSum=2.420;VQSLOD=4.3792;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,99,1477	0/0:7,0:7:21.01:0,21,256	0/0:21,0:20:52.41:0,52,596	0/0:9,0:8:14.85:0,15,179	0/0:17,0:17:51.16:0,51,782	0/0:20,0:20:60.20:0,60,949	0/0:12,0:12:36.05:0,36,495	0/0:29,0:29:87.10:0,87,1257	0/0:14,0:14:39.13:0,39,616	1/1:4,17:21:57.18:777,57,0	1/1:0,19:19:54.13:704,54,0	0/0:17,0:17:51.16:0,51,771	0/0:15,0:14:39.10:0,39,562	0/0:13,0:13:39.07:0,39,566	1/1:0,14:14:33.11:455,33,0	0/1:1,15:16:8.60:438,0,9	1/1:0,25:25:69.04:886,69,0	1/1:1,30:31:50.27:971,50,0	0/0:18,0:18:54.16:0,54,816	0/0:17,0:17:51.17:0,51,807	0/0:13,0:13:39.13:0,39,616	0/0:17,0:17:36.64:0,37,508	0/0:29,0:29:87.26:0,87,1302	0/0:11,0:11:33.04:0,33,493	1/1:0,12:12:33.11:447,33,0	0/0:12,0:12:36.10:0,36,543	0/0:33,0:32:96.22:0,96,1405	0/0:18,0:18:54.17:0,54,833
chr10	44941425	.	TATC	T	2575.53	PASS	AB=0.944;AC=17;AF=0.304;AN=56;BaseQRankSum=3.024;DP=598;FS=4.178;HRun=0;HaplotypeScore=118.1961;InbreedingCoeff=0.8958;MQ=55.67;MQ0=18;MQRankSum=4.869;QD=16.40;ReadPosRankSum=2.118;VQSLOD=3.4412;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:25:18.03:0,18,233	1/1:3,0:9:17.86:126,18,0	0/0:26,0:15:9.03:0,9,152	0/0:42,0:18:9.03:0,9,163	0/0:13,0:21:16.80:0,17,131	0/0:19,0:19:42.14:0,42,813	0/0:14,0:14:24.08:0,24,464	0/0:25,0:24:24.08:0,24,416	0/0:24,0:24:54.17:0,54,1003	1/1:7,11:18:36.12:482,36,0	1/1:6,8:14:15.05:201,15,0	0/1:16,1:17:4.03:4,0,600	0/0:25,0:25:48.16:0,48,921	0/0:19,0:19:33.10:0,33,606	1/1:17,14:31:33.11:442,33,0	1/1:4,12:16:27.09:361,27,0	1/1:12,13:25:33.11:442,33,0	1/1:3,9:12:24.08:321,24,0	0/0:20,0:23:27.09:0,27,439	0/0:7,0:15:20.97:0,21,252	0/0:29,0:27:12:0,12,158	0/0:10,0:10:24.08:0,24,464	0/0:4,0:12:8.65:0,9,117	0/0:15,0:36:54.18:0,54,743	1/1:4,11:15:30.10:402,30,0	0/0:13,0:19:36.12:0,36,548	0/0:19,0:38:44.88:0,45,497	0/0:11,0:16:21.07:0,21,297
chr10	44941653	.	C	CAT	261.05	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.076;DP=521;FS=1.517;HRun=0;HaplotypeScore=60.4621;InbreedingCoeff=0.9896;MQ=73.85;MQ0=0;MQRankSum=-2.908;QD=32.63;ReadPosRankSum=1.804;VQSLOD=5.7066;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:60.17:0,60,927	1/1:1,7:8:20.15:353,20,0	0/0:16,0:16:36.08:0,36,536	0/0:12,0:12:30.10:0,30,488	0/0:25,0:25:72.25:0,72,1165	0/0:23,0:23:66.19:0,66,1027	0/0:7,0:7:21.07:0,21,341	0/0:36,0:36:99:0,108,1750	0/0:12,0:12:36.12:0,36,578	0/0:12,0:12:36.12:0,36,566	0/0:23,0:23:69.24:0,69,1115	0/0:17,0:17:51.16:0,51,808	0/0:17,0:17:45.15:0,45,732	0/0:17,0:17:51.16:0,51,808	0/0:18,0:18:54.18:0,54,870	0/0:20,0:20:60.19:0,60,954	0/0:30,0:30:87.30:0,87,1399	0/0:12,0:12:33.09:0,33,504	0/0:20,0:20:57.19:0,57,906	0/0:28,0:28:84.29:0,84,1365	0/0:24,0:24:69.22:0,69,1099	0/0:12,0:12:36.12:0,36,584	0/0:23,0:23:69.24:0,69,1124	0/0:16,0:16:48.16:0,48,783	0/0:22,0:22:66.23:0,66,1077	0/0:20,0:20:60.20:0,60,957	0/0:18,0:18:54.17:0,54,856	0/0:12,0:12:36.12:0,36,581
chr10	44943258	.	G	GT	2724.29	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-2.208;DP=528;FS=20.761;HRun=9;HaplotypeScore=51.5911;InbreedingCoeff=0.9312;MQ=58.38;MQ0=14;MQRankSum=-1.698;QD=18.41;ReadPosRankSum=2.997;VQSLOD=2.3709;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:71.95:0,72,621	1/1:11,0:6:8.68:52,9,0	0/0:23,0:8:4.22:0,4,40	0/0:14,0:6:5.97:0,6,47	0/0:25,0:25:74.87:0,75,635	0/0:25,0:25:56.95:0,57,490	0/0:12,0:11:26.99:0,27,234	0/0:25,0:25:53.96:0,54,466	0/0:24,0:23:56.97:0,57,495	1/1:6,14:17:7.04:303,7,0	1/1:2,21:21:54.06:581,54,0	0/0:13,0:13:32.93:0,33,276	0/0:14,0:14:35.95:0,36,305	0/0:10,0:10:23.98:0,24,205	1/1:6,22:27:51.14:563,51,0	1/1:2,17:18:39.11:431,39,0	1/1:2,10:12:21.06:232,21,0	1/1:4,14:18:35.93:398,36,0	0/0:26,0:24:62.94:0,63,539	0/0:23,0:23:50.94:0,51,434	0/0:20,0:20:50.93:0,51,428	0/0:16,0:16:47.85:0,48,400	0/0:11,0:11:20.98:0,21,182	0/0:13,0:13:32.98:0,33,282	1/1:3,14:17:33.09:365,33,0	0/0:25,0:25:65.90:0,66,560	0/0:24,0:24:62.96:0,63,544	0/0:8,0:8:20.99:0,21,182
chr10	44943267	.	T	TA	734.53	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=12.947;DP=520;FS=15.136;HRun=3;HaplotypeScore=55.1109;InbreedingCoeff=0.8559;MQ=56.35;MQ0=25;MQRankSum=-0.192;QD=5.25;ReadPosRankSum=2.291;VQSLOD=-0.7320;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:72.20:0,72,846	1/1:3,9:8:11.77:131,12,0	0/0:22,0:4:8.39:0,8,61	0/0:13,0:5:2.97:0,3,20	0/0:30,0:30:79.07:0,79,886	0/0:26,0:26:66.16:0,66,750	0/0:14,0:13:30.08:0,30,345	0/0:22,0:20:60.15:0,60,683	0/0:25,0:24:60.17:0,60,702	0/1:18,0:15:34.58:43,0,35	1/1:24,0:22:27.24:165,27,0	0/0:12,0:12:27.08:0,27,321	0/0:14,0:14:39.11:0,39,452	0/0:9,0:9:21.06:0,21,250	1/1:22,0:20:41.88:169,42,0	1/1:19,0:17:30.95:124,31,0	1/1:11,0:11:17.59:71,18,0	1/1:17,0:17:13.23:110,13,0	0/0:26,0:22:63.16:0,63,737	0/0:19,0:18:45.12:0,45,524	0/0:23,0:23:51.09:0,51,578	0/0:17,0:17:48.15:0,48,567	0/0:9,0:9:24.06:0,24,273	0/0:14,0:14:33.07:0,33,378	1/1:16,0:16:27.57:117,28,0	0/0:25,0:25:69.16:0,69,779	0/0:22,0:22:63.18:0,63,738	0/0:10,0:10:27.05:0,27,298
chr10	44943835	.	A	AG	109.66	PASS	AC=2;AF=0.038;AN=52;BaseQRankSum=3.366;DP=520;FS=0.000;HRun=1;HaplotypeScore=41.9951;InbreedingCoeff=0.9508;MQ=48.41;MQ0=49;MQRankSum=-1.943;QD=8.44;ReadPosRankSum=0.399;VQSLOD=0.6614;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:60,0:57:99:0,108,1293	1/1:7,6:11:15.01:198,15,0	./.	./.	0/0:15,0:15:15.05:0,15,192	0/0:12,0:12:26.98:0,27,326	0/0:18,0:12:29.80:0,30,300	0/0:17,0:7:21.05:0,21,245	0/0:17,0:17:51.13:0,51,616	0/0:16,0:13:39.07:0,39,460	0/0:12,0:12:17.98:0,18,199	0/0:15,0:15:33.11:0,33,421	0/0:12,0:12:27.06:0,27,319	0/0:27,0:27:78.22:0,78,966	0/0:16,0:16:48.16:0,48,620	0/0:14,0:14:39.11:0,39,479	0/0:28,0:25:51.14:0,51,642	0/0:26,0:24:54.15:0,54,682	0/0:16,0:14:42.13:0,42,535	0/0:22,0:21:44.87:0,45,483	0/0:15,0:14:33:0,33,387	0/0:18,0:15:36.05:0,36,440	0/0:16,0:15:24.01:0,24,288	0/0:16,0:16:33.11:0,33,426	0/0:14,0:14:32.85:0,33,381	0/0:18,0:17:48.01:0,48,568	0/0:18,0:18:45.04:0,45,519	0/0:20,0:18:39.10:0,39,471
chr10	44943939	.	A	AT	262.72	PASS	AB=0.593;AC=1;AF=0.019;AN=54;BaseQRankSum=1.007;DP=620;FS=0.000;HRun=1;HaplotypeScore=73.5666;InbreedingCoeff=-0.0250;MQ=53.05;MQ0=53;MQRankSum=-3.424;QD=16.42;ReadPosRankSum=-0.591;VQSLOD=3.4067;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:61,0:58:99:0,175,2427	0/1:5,11:12:92.45:337,0,92	0/0:23,0:1:3.01:0,3,35	./.	0/0:35,0:35:99:0,105,1445	0/0:22,0:22:66.21:0,66,905	0/0:11,0:11:33.03:0,33,388	0/0:21,0:13:39.11:0,39,512	0/0:16,0:16:48.16:0,48,669	0/0:27,0:25:72.21:0,72,853	0/0:25,0:25:72.17:0,72,795	0/0:15,0:16:45.15:0,45,629	0/0:16,0:16:48.16:0,48,669	0/0:19,0:18:51.16:0,51,696	0/0:16,0:16:41.89:0,42,484	0/0:15,0:15:29.85:0,30,346	0/0:34,0:34:93.27:0,93,1075	0/0:19,0:19:54.14:0,54,606	0/0:18,0:11:33.11:0,33,462	0/0:19,0:19:57.16:0,57,757	0/0:18,0:18:54.18:0,54,755	0/0:24,0:24:68.96:0,69,924	0/0:24,0:23:63.19:0,63,863	0/0:19,0:19:57.19:0,57,792	0/0:19,0:19:57.10:0,57,609	0/0:26,0:26:78.24:0,78,1061	0/0:28,0:28:84.28:0,84,1174	0/0:11,0:11:33.11:0,33,461
chr10	44943941	.	GA	G	4792.96	PASS	AC=14;AF=0.269;AN=52;BaseQRankSum=10.575;DP=613;FS=15.957;HRun=4;HaplotypeScore=59.2448;InbreedingCoeff=0.9993;MQ=53.00;MQ0=55;MQRankSum=1.360;QD=31.12;ReadPosRankSum=1.399;VQSLOD=3.4772;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:62,0:59:99:0,169,2350	0/0:16,0:12:35.71:0,36,364	./.	./.	0/0:35,0:35:99:0,99,1385	0/0:21,0:21:63.21:0,63,881	0/0:8,0:8:24.08:0,24,335	0/0:19,0:11:33.11:0,33,462	0/0:16,0:16:45.15:0,45,630	1/1:1,26:25:72.21:853,72,0	1/1:0,25:25:72.15:845,72,0	0/0:16,0:16:45.15:0,45,630	0/0:16,0:16:42.13:0,42,571	0/0:18,0:17:48.16:0,48,671	1/1:0,16:16:39.12:468,39,0	1/1:0,15:15:30.09:360,30,0	1/1:2,32:34:87.27:1044,87,0	1/1:0,18:18:51.16:612,51,0	0/0:19,0:11:33.11:0,33,462	0/0:18,0:18:54.17:0,54,738	0/0:18,0:18:54.18:0,54,756	0/0:24,0:24:66.21:0,66,909	0/0:26,0:25:72.19:0,72,954	0/0:19,0:19:54.18:0,54,756	1/1:2,17:19:51.16:611,51,0	0/0:25,0:25:75.24:0,75,1035	0/0:28,0:28:84.28:0,84,1175	0/0:11,0:11:33.11:0,33,462
chr10	44945557	.	C	CT	93.87	PASS	AC=2;AF=0.038;AN=52;BaseQRankSum=2.856;DP=693;FS=4.801;HRun=1;HaplotypeScore=73.2835;InbreedingCoeff=0.7978;MQ=44.88;MQ0=92;MQRankSum=-2.710;QD=15.64;ReadPosRankSum=1.114;VQSLOD=3.6609;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:31:63.20:0,63,817	1/1:2,4:4:12.04:179,12,0	./.	./.	0/0:20,0:20:45.15:0,45,584	0/0:16,0:16:36.07:0,36,448	0/0:28,0:25:44.77:0,45,583	0/0:28,0:17:51.12:0,51,642	0/0:35,0:34:87.20:0,87,1109	0/0:23,0:19:51.16:0,51,659	0/0:15,0:14:18.06:0,18,233	0/0:31,0:31:71.89:0,72,915	0/0:27,0:26:63.18:0,63,818	0/0:36,0:34:78.18:0,78,978	0/0:12,0:9:21.07:0,21,273	0/0:22,0:18:38.80:0,39,506	0/0:24,0:23:51.17:0,51,662	0/0:18,0:17:27.07:0,27,334	0/0:17,0:9:27.03:0,27,306	0/0:23,0:23:69.22:0,69,893	0/0:47,0:36:72.23:0,72,934	0/0:27,0:25:63.20:0,63,816	0/0:13,0:13:15.04:0,15,180	0/0:43,0:41:87.23:0,87,1095	0/0:18,0:18:33.11:0,33,428	0/0:30,0:27:75.24:0,75,961	0/0:23,0:22:45.15:0,45,584	0/0:6,0:4:3.01:0,3,39
chr10	44945671	.	A	ATCT	87.30	PASS	AC=6;AF=0.130;AN=46;BaseQRankSum=1.383;DP=520;FS=13.778;HRun=0;HaplotypeScore=68.8218;InbreedingCoeff=0.7695;MQ=54.20;MQ0=47;MQRankSum=-2.939;QD=4.85;ReadPosRankSum=-1.795;VQSLOD=-0.0191;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:27:60.20:0,60,928	./.	0/0:32,0:19:54.04:0,54,750	0/0:30,0:21:53.67:0,54,776	0/0:10,0:10:17.33:0,17,276	0/0:20,0:19:39.12:0,39,582	0/0:24,0:24:69.18:0,69,1020	0/0:30,0:30:81.25:0,81,1208	0/0:35,0:34:75.24:0,75,1135	1/1:1,5:1:3.01:64,3,0	1/1:2,5:4:3.48:65,3,0	0/0:23,0:23:54.14:0,54,835	0/0:21,0:21:51.16:0,51,767	0/0:38,0:37:90.13:0,90,1364	./.	./.	./.	1/1:1,4:2:3.01:64,3,0	0/0:14,0:12:27.04:0,27,369	0/0:14,0:14:30.10:0,30,456	0/0:37,0:34:90.29:0,90,1371	0/0:7,0:7:18.06:0,18,277	0/0:7,0:7:15.04:0,15,202	0/0:35,0:35:93.32:0,93,1437	./.	0/0:15,0:15:42.13:0,42,629	0/0:28,0:27:66.22:0,66,1021	0/0:15,0:13:39.09:0,39,577
chr10	44947410	.	AG	A	105.86	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.535;DP=587;FS=11.240;HRun=1;HaplotypeScore=54.5900;InbreedingCoeff=0.9659;MQ=57.82;MQ0=8;MQRankSum=-2.477;QD=17.64;ReadPosRankSum=2.244;VQSLOD=2.6789;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,151,2395	1/1:1,5:5:15.05:194,15,0	0/0:16,0:8:14.88:0,15,203	0/0:24,1:12:33.09:0,33,473	0/0:31,0:31:87.30:0,87,1389	0/0:20,0:20:60.19:0,60,935	0/0:20,0:20:60.19:0,60,933	0/0:25,0:25:75.25:0,75,1177	0/0:21,0:21:63.21:0,63,1006	0/0:26,0:26:78.25:0,78,1205	0/0:22,0:22:66.21:0,66,1029	0/0:22,0:22:66.21:0,66,1031	0/0:17,0:17:51.16:0,51,790	0/0:13,0:12:36.12:0,36,575	0/0:15,0:15:45.15:0,45,719	0/0:22,0:22:66.23:0,66,1055	0/0:25,0:25:75.26:0,75,1196	0/0:17,0:17:42.14:0,42,658	0/0:21,0:15:45.14:0,45,690	0/0:25,0:25:75.25:0,75,1183	0/0:10,0:10:30.10:0,30,480	0/0:17,0:17:48.01:0,48,705	0/0:19,0:19:57.18:0,57,888	0/0:12,0:12:36.11:0,36,551	0/0:25,0:25:75.23:0,75,1173	0/0:25,0:25:72.24:0,72,1129	0/0:31,0:30:93.32:0,93,1479	0/0:9,0:9:27.09:0,27,431
chr10	44947997	.	AAGAGAGAG	A	1316.83	PASS	AB=0.792;AC=18;AF=0.360;AN=50;BaseQRankSum=3.780;DP=520;FS=19.512;HRun=0;HaplotypeScore=145.6314;InbreedingCoeff=0.1681;MQ=64.65;MQ0=8;MQRankSum=-3.477;QD=5.33;ReadPosRankSum=-0.632;VQSLOD=0.7982;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:23:5.05:20,5,0	./.	./.	./.	0/0:17,0:17:14.30:0,14,477	0/0:21,0:21:25.50:0,26,845	0/0:20,0:20:18.05:0,18,574	0/0:18,0:18:11.95:0,12,102	0/1:10,0:22:27.15:27,0,30	0/1:25,0:26:20.39:200,0,20	1/1:25,3:25:1.81:88,2,0	0/1:11,2:15:14.58:59,0,15	0/1:16,2:24:28.88:225,0,29	0/1:11,0:13:24.76:57,0,25	1/1:8,9:18:15.52:354,16,0	0/1:8,9:17:4.12:282,0,4	0/1:12,1:17:66.55:67,0,121	1/1:9,0:9:2.90:16,3,0	0/0:16,0:13:9.03:0,9,205	0/0:22,0:22:9.02:0,9,200	0/0:13,0:13:12.04:0,12,407	0/1:23,0:25:6.20:73,0,6	0/0:22,0:22:8.22:0,8,211	0/0:26,0:31:24.72:0,25,334	1/1:8,1:7:1.36:3,1,0	0/0:25,0:25:36.07:0,36,898	0/0:15,0:15:33.58:0,34,1153	0/0:12,0:11:10.22:0,10,179
chr10	44948066	.	TAAGA	T	1695.34	PASS	AB=0.797;AC=16;AF=0.333;AN=48;BaseQRankSum=-0.869;DP=510;FS=3.253;HRun=0;HaplotypeScore=106.2816;InbreedingCoeff=0.7179;MQ=63.16;MQ0=7;MQRankSum=-1.181;QD=11.30;ReadPosRankSum=2.644;VQSLOD=3.0066;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:15:30.10:0,30,592	./.	./.	./.	0/0:17,0:17:18.06:0,18,415	0/0:6,0:19:21.07:0,21,366	0/0:15,0:14:15.05:0,15,317	./.	0/0:17,0:17:15.05:0,15,346	1/1:12,13:25:39.09:545,39,0	1/1:9,5:14:6.02:90,6,0	1/1:9,7:16:12.04:181,12,0	0/0:18,0:18:27.09:0,27,615	0/1:7,5:12:57.22:124,0,57	0/0:19,0:23:42.14:0,42,774	0/0:19,0:18:27.09:0,27,603	0/0:22,0:23:13.29:0,13,207	0/1:7,1:8:33.19:33,0,194	0/0:6,0:13:24.08:0,24,447	0/0:10,0:16:21.07:0,21,430	0/0:8,0:8:9.03:0,9,192	1/1:6,8:14:9.03:136,9,0	1/1:9,7:15:12.04:181,12,0	1/1:14,12:26:10.11:177,10,0	1/1:7,12:19:27.09:407,27,0	0/0:15,0:21:36.12:0,36,709	0/0:14,0:22:15.05:0,15,282	0/0:1,0:5:6.02:0,6,104
chr10	44948486	.	T	TGAGA	1540.24	PASS	AB=0.821;AC=29;AF=0.604;AN=48;BaseQRankSum=-4.950;DP=518;FS=0.957;HRun=0;HaplotypeScore=113.0756;InbreedingCoeff=0.5115;MQ=59.40;MQ0=5;MQRankSum=1.254;QD=5.26;ReadPosRankSum=-3.978;VQSLOD=1.2478;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:14:3:0,3,28	./.	0/1:27,0:15:0:0,0,0	./.	0/0:17,0:24:7.56:0,8,60	1/1:12,12:28:3.01:71,3,0	0/1:13,4:18:36.80:74,0,37	1/1:20,0:20:1.82:5,2,0	1/1:13,1:18:6:123,6,0	1/1:20,0:18:13.86:230,14,0	1/1:16,0:16:6.02:102,6,0	1/1:4,7:13:3.01:71,3,0	1/1:12,0:12:9.03:121,9,0	1/1:9,0:11:2.74:12,3,0	1/1:15,0:12:8.94:157,9,0	1/1:18,0:17:5.57:121,6,0	0/0:13,0:23:17.97:0,18,167	1/1:12,0:13:9.02:124,9,0	0/0:18,0:19:6.01:0,6,56	0/0:16,0:31:21.01:0,21,191	./.	1/1:23,0:23:20.54:281,21,0	0/1:11,5:19:30.28:74,0,30	./.	1/1:20,0:20:8.99:138,9,0	0/0:14,0:23:14.33:0,14,138	0/0:10,0:16:15.02:0,15,140	0/0:5,0:8:6.01:0,6,56
chr10	44951297	.	G	GCA	220.30	PASS	AB=0.909;AC=11;AF=0.229;AN=48;BaseQRankSum=2.575;DP=398;FS=5.455;HRun=0;HaplotypeScore=46.8657;InbreedingCoeff=0.4640;MQ=46.58;MQ0=22;MQRankSum=-2.955;QD=3.55;ReadPosRankSum=-2.061;VQSLOD=0.1738;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:14:2.98:0,3,23	./.	./.	0/0:35,0:5:6.64:0,7,48	0/0:7,0:7:3.01:0,3,33	0/0:6,0:6:8.86:0,9,83	0/0:20,0:18:2.59:0,3,60	0/0:19,0:18:11.81:0,12,102	0/0:18,0:18:20.55:0,21,172	1/1:7,0:6:1.25:3,1,0	./.	0/0:6,0:6:11.86:0,12,105	0/0:9,0:9:17.88:0,18,181	0/0:8,0:8:15.02:0,15,154	1/1:5,0:3:3:26,3,0	1/1:3,0:3:3:26,3,0	1/1:15,3:14:18.04:230,18,0	1/1:13,0:9:3.01:33,3,0	0/0:6,0:8:8.38:0,8,58	0/0:21,0:18:11.83:0,12,90	0/0:34,0:33:23.86:0,24,249	0/0:17,0:17:27.03:0,27,265	0/0:12,0:12:26.85:0,27,266	0/0:29,0:25:50.46:0,50,491	./.	0/1:9,1:8:31.40:31,0,79	0/0:14,0:14:3:0,3,30	0/0:3,0:3:3.01:0,3,34
chr10	44951791	.	G	GA	96.91	PASS	AC=4;AF=0.091;AN=44;BaseQRankSum=2.008;DP=401;FS=1.803;HRun=3;HaplotypeScore=48.3064;InbreedingCoeff=0.8674;MQ=73.49;MQ0=11;MQRankSum=0.225;QD=10.77;ReadPosRankSum=0.723;VQSLOD=1.4654;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:63.19:0,63,754	1/1:1,4:5:12.04:168,12,0	0/0:16,0:16:45.08:0,45,506	0/0:19,0:19:57.08:0,57,626	0/0:39,0:39:99:0,105,1259	0/0:25,0:25:69.21:0,69,828	0/0:12,0:12:36.10:0,36,421	0/0:25,0:25:69.21:0,69,828	0/0:14,0:14:36.11:0,36,432	1/1:4,0:1:3:29,3,0	./.	0/0:17,0:17:45.14:0,45,540	0/0:8,0:8:24.07:0,24,288	0/0:22,0:22:63.19:0,63,756	./.	./.	./.	./.	0/0:6,0:6:15.05:0,15,180	0/0:35,0:35:99:0,105,1260	0/0:11,0:11:33.10:0,33,396	0/0:23,0:23:60.17:0,60,708	0/0:21,0:21:57.15:0,57,661	0/0:6,0:6:18.06:0,18,216	./.	0/0:24,0:24:72.22:0,72,864	0/0:23,0:23:66.19:0,66,779	0/0:10,0:10:27.08:0,27,324
chr10	44951868	.	TG	T	107.33	PASS	AC=2;AF=0.045;AN=44;BaseQRankSum=3.667;DP=363;FS=1.583;HRun=1;HaplotypeScore=36.4406;InbreedingCoeff=0.6525;MQ=49.94;MQ0=43;MQRankSum=0.864;QD=15.33;ReadPosRankSum=-0.838;VQSLOD=2.9491;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:15:42.14:0,42,642	1/1:3,4:7:17.98:196,18,0	./.	./.	0/0:37,0:37:96.31:0,96,1446	0/0:24,0:24:63.20:0,63,942	0/0:6,0:6:15.05:0,15,229	0/0:21,0:13:39.07:0,39,508	0/0:18,0:18:45.15:0,45,688	./.	0/0:3,0:1:3.01:0,3,45	0/0:15,0:15:42.13:0,42,622	0/0:6,0:6:18.06:0,18,275	0/0:17,0:17:44.72:0,45,630	0/0:1,0:1:3.01:0,3,45	0/0:3,0:2:6.02:0,6,91	./.	./.	0/0:15,0:7:21.05:0,21,287	0/0:31,0:30:78.24:0,78,1149	0/0:15,0:14:42.08:0,42,568	0/0:13,0:13:33.09:0,33,481	0/0:20,0:19:48.16:0,48,731	0/0:7,0:7:21.03:0,21,295	./.	0/0:20,0:20:60.17:0,60,875	0/0:23,0:23:57.11:0,57,826	0/0:14,0:13:30.08:0,30,435
chr10	44951946	.	T	TC	105.44	PASS	AC=2;AF=0.048;AN=42;BaseQRankSum=4.124;DP=398;FS=0.000;HRun=4;HaplotypeScore=57.9555;InbreedingCoeff=0.9652;MQ=60.97;MQ0=4;MQRankSum=0.138;QD=13.18;ReadPosRankSum=-0.742;VQSLOD=1.5026;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:84.19:0,84,929	1/1:1,7:7:15.05:192,15,0	0/0:18,0:13:26.78:0,27,280	0/0:28,0:24:44.57:0,45,479	0/0:23,0:23:63.16:0,63,704	0/0:15,0:15:39.11:0,39,442	0/0:14,0:14:42.12:0,42,476	0/0:24,0:24:57.13:0,57,619	0/0:16,0:16:42.12:0,42,476	./.	./.	0/0:25,0:25:69.19:0,69,783	0/0:11,0:11:30.09:0,30,340	0/0:13,0:13:39.11:0,39,442	./.	./.	./.	./.	0/0:11,0:11:30.09:0,30,340	0/0:13,0:13:30.08:0,30,340	0/0:36,0:36:84.22:0,84,943	0/0:22,0:22:57.16:0,57,646	0/0:25,0:25:66.18:0,66,736	0/0:29,0:29:73.05:0,73,805	./.	0/0:12,0:12:36.10:0,36,408	0/0:18,0:18:54.12:0,54,592	0/0:5,0:5:15.04:0,15,170
chr10	44952874	.	T	TTGTG	5155.40	PASS	AB=0.760;AC=8;AF=0.200;AN=40;BaseQRankSum=-7.391;DP=659;FS=24.631;HRun=0;HaplotypeScore=110.8792;InbreedingCoeff=-0.2601;MQ=41.89;MQ0=128;MQRankSum=-5.825;QD=17.01;ReadPosRankSum=3.095;VQSLOD=2.9609;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:33,13:44:99:829,0,874	./.	0/0:40,0:4:8.03:0,8,130	0/0:36,0:5:9.01:0,9,116	0/1:26,10:37:99:376,0,786	0/0:20,0:13:24.08:0,24,397	0/0:40,0:40:99:0,105,1547	0/0:20,0:9:24.07:0,24,352	0/0:35,0:28:72.15:0,72,1094	./.	./.	0/0:17,0:17:48.16:0,48,774	0/0:20,0:16:42.14:0,42,667	0/0:25,0:20:51.17:0,51,831	./.	./.	./.	./.	0/1:15,7:18:99:462,0,488	0/1:29,7:38:99:358,0,1077	0/1:43,25:61:99:1820,0,1126	0/0:23,0:23:63.11:0,63,905	0/0:22,0:24:49.04:0,49,775	0/0:22,0:19:51.14:0,51,814	./.	0/1:20,9:23:99:450,0,633	0/1:20,13:28:99:599,0,577	0/1:11,4:16:99:262,0,452
chr10	44953418	.	C	CT	521.52	PASS	AC=12;AF=0.222;AN=54;BaseQRankSum=-0.788;DP=488;FS=6.250;HRun=2;HaplotypeScore=46.0226;InbreedingCoeff=0.8528;MQ=70.74;MQ0=5;MQRankSum=-3.241;QD=18.63;ReadPosRankSum=-5.501;VQSLOD=1.6958;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,120,1450	0/0:4,0:4:12.04:0,12,148	0/0:27,0:19:57.17:0,57,698	0/0:21,0:15:13.40:0,13,481	0/0:26,0:26:75.20:0,75,901	0/0:29,0:29:87.26:0,87,1065	0/0:25,0:25:75.19:0,75,891	0/0:25,0:25:69.19:0,69,829	0/0:21,0:21:60.18:0,60,731	1/1:4,2:6:18.06:258,18,0	1/1:0,2:2:3.01:43,3,0	0/0:12,0:12:36.11:0,36,446	0/0:21,0:21:60.19:0,60,743	0/0:19,0:19:51.16:0,51,631	1/1:1,5:5:12.04:167,12,0	1/1:1,4:4:6.02:86,6,0	./.	1/1:1,4:3:5.99:64,6,0	0/0:16,0:14:42.13:0,42,521	0/0:30,0:30:87.25:0,87,1062	0/0:26,0:26:75.24:0,75,929	0/0:20,0:20:51.14:0,51,618	0/0:22,0:22:60.19:0,60,741	0/0:11,0:11:33.10:0,33,409	1/1:0,4:2:5.97:62,6,0	0/0:16,0:16:42.13:0,42,520	0/0:42,0:41:99:0,114,1397	0/0:5,0:5:6.02:0,6,74
chr10	44954277	.	GCACA	G	903.74	PASS	AB=0.787;AC=17;AF=0.472;AN=36;BaseQRankSum=2.418;DP=294;FS=7.036;HRun=0;HaplotypeScore=62.0636;InbreedingCoeff=0.3459;MQ=54.64;MQ0=21;MQRankSum=-0.667;QD=6.65;ReadPosRankSum=3.119;VQSLOD=0.6472;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:15,0:24:11.53:24,0,12	./.	./.	./.	0/0:5,0:2:0:0,0,0	0/0:13,0:12:12.01:0,12,205	0/0:11,0:11:12.04:0,12,279	./.	1/1:6,7:12:9.03:141,9,0	0/0:10,0:5:3:0,3,26	./.	1/1:4,3:7:9.03:141,9,0	1/1:4,2:5:3.01:47,3,0	1/1:2,9:11:16.94:255,17,0	./.	0/0:4,0:4:2.94:0,3,18	./.	0/0:9,0:8:8.92:0,9,115	0/1:14,0:13:19.04:19,0,31	./.	1/1:23,0:21:2.99:24,3,0	1/1:1,4:7:11.98:141,12,0	0/0:2,2:4:0:0,0,0	1/1:9,4:14:9.03:141,9,0	./.	0/0:9,0:9:0.47:0,0,1	0/1:9,0:16:10.96:97,0,11	./.
chr10	44961494	.	A	AT	1949.34	PASS	AB=0.556;AC=15;AF=0.313;AN=48;BaseQRankSum=-4.558;DP=388;FS=5.916;HRun=4;HaplotypeScore=22.6049;InbreedingCoeff=0.7820;MQ=29.29;MQ0=154;MQRankSum=-0.284;QD=15.11;ReadPosRankSum=1.151;VQSLOD=1.7282;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:3,12:13:6.96:259,0,7	./.	./.	./.	1/1:6,13:12:24.08:321,24,0	0/0:21,0:18:30.08:0,30,337	0/0:8,0:2:6.02:0,6,66	0/0:19,0:5:12.03:0,12,135	0/0:16,0:11:27.08:0,27,305	0/0:27,0:11:27.08:0,27,306	0/0:26,0:5:9.03:0,9,102	0/0:14,0:11:21.05:0,21,233	0/0:12,0:9:24.07:0,24,272	0/0:11,0:9:18.05:0,18,202	0/0:12,0:6:12.03:0,12,136	0/0:11,0:8:15.04:0,15,170	./.	0/0:10,0:5:9.03:0,9,102	1/1:6,5:7:15.05:205,15,0	1/1:5,22:10:15.05:205,15,0	1/1:1,8:8:21.07:287,21,0	0/0:17,0:8:21.05:0,21,229	0/0:19,0:9:9.02:0,9,100	0/0:13,0:5:3.01:0,3,34	0/0:22,0:14:27.07:0,27,301	1/1:8,15:15:42.14:569,42,0	1/1:1,14:9:18.06:240,18,0	1/1:1,8:1:3.01:41,3,0
chr10	44963672	.	GTCTC	G	644.25	PASS	AC=12;AF=0.231;AN=52;BaseQRankSum=3.321;DP=339;FS=21.105;HRun=0;HaplotypeScore=62.3753;InbreedingCoeff=0.8081;MQ=53.70;MQ0=16;MQRankSum=-2.294;QD=18.41;ReadPosRankSum=1.012;VQSLOD=1.5741;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:33:60.21:0,60,1486	./.	0/0:41,0:21:24.68:0,25,1003	0/0:54,0:19:34.03:0,34,616	0/0:9,0:8:11.76:0,12,297	0/0:7,0:6:12.04:0,12,298	0/0:7,0:7:20.54:0,21,398	0/0:13,0:11:30.10:0,30,712	0/0:11,0:11:27.09:0,27,651	1/1:4,4:8:17.95:269,18,0	1/1:2,3:5:9.03:151,9,0	0/0:5,0:5:6.01:0,6,100	0/0:12,0:10:27.08:0,27,605	0/0:8,0:9:11.78:0,12,236	1/1:1,2:2:3.01:51,3,0	1/1:2,1:1:3.01:51,3,0	./.	1/1:4,6:10:9.03:152,9,0	0/0:9,0:11:26.40:0,26,465	0/0:11,0:11:27.08:0,27,623	0/0:22,0:23:30.10:0,30,746	0/0:3,0:3:6.02:0,6,149	0/0:11,0:11:24.08:0,24,597	0/0:16,0:15:30.10:0,30,723	1/1:1,3:6:9.02:129,9,0	0/0:12,0:12:36.12:0,36,881	0/0:8,0:9:26.98:0,27,612	0/0:3,0:3:9.03:0,9,224
chr10	44963725	.	CT	C	2347.82	PASS	AC=28;AF=0.538;AN=52;BaseQRankSum=4.370;DP=202;FS=5.144;HRun=9;HaplotypeScore=28.6082;InbreedingCoeff=0.8204;MQ=70.98;MQ0=1;MQRankSum=-3.294;QD=19.73;ReadPosRankSum=4.566;VQSLOD=3.0828;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,20:22:42.02:384,42,0	./.	0/0:6,0:5:4.28:0,4,63	0/0:15,0:10:9.31:0,9,67	1/1:0,10:10:27.01:247,27,0	0/0:6,0:6:12.04:0,12,138	0/0:7,0:7:18.05:0,18,208	0/0:12,0:11:21.02:0,21,220	0/0:5,0:5:12.04:0,12,138	1/1:1,10:11:33:296,33,0	1/1:1,4:5:9:82,9,0	0/0:4,0:4:6.02:0,6,69	0/0:4,0:4:6.02:0,6,69	0/0:3,0:3:3.01:0,3,35	1/1:0,3:3:6:55,6,0	1/1:1,1:2:3:27,3,0	./.	1/1:1,3:4:9:82,9,0	1/1:6,10:16:30.01:275,30,0	1/1:1,8:9:24.01:220,24,0	1/1:0,6:6:15.01:137,15,0	0/0:3,0:3:9.03:0,9,104	0/0:8,0:8:18.01:0,18,193	0/0:9,0:9:21.06:0,21,242	1/1:0,8:8:24.01:220,24,0	1/1:1,10:11:30.01:275,30,0	1/1:2,6:8:18.01:165,18,0	1/1:1,3:4:9:82,9,0
chr10	44970290	.	TA	T	159.99	PASS	AC=2;AF=0.037;AN=54;BaseQRankSum=1.312;DP=568;FS=8.420;HRun=4;HaplotypeScore=72.9306;InbreedingCoeff=0.9957;MQ=75.69;MQ0=0;MQRankSum=-0.564;QD=20.00;ReadPosRankSum=0.741;VQSLOD=2.5303;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,99,1327	1/1:0,8:7:21.06:252,21,0	0/0:21,0:21:57.19:0,57,775	0/0:26,0:26:66.13:0,66,873	0/0:22,0:22:66.22:0,66,924	0/0:17,0:17:45.15:0,45,625	0/0:18,0:18:48.16:0,48,672	0/0:29,0:29:87.28:0,87,1190	0/0:18,0:18:54.18:0,54,756	0/0:22,0:22:63.20:0,63,865	0/0:18,0:18:51.16:0,51,698	0/0:12,0:12:36.11:0,36,489	0/0:18,0:18:54.18:0,54,756	0/0:15,0:15:45.15:0,45,629	0/0:17,0:17:51.17:0,51,707	0/0:21,0:21:60.20:0,60,840	./.	0/0:16,0:16:45.15:0,45,629	0/0:22,0:22:63.21:0,63,881	0/0:41,0:41:99:0,114,1577	0/0:23,0:23:66.21:0,66,905	0/0:20,0:20:57.19:0,57,798	0/0:27,0:27:78.26:0,78,1091	0/0:26,0:26:75.25:0,75,1048	0/0:20,0:20:60.19:0,60,821	0/0:22,0:22:63.21:0,63,882	0/0:20,0:20:57.19:0,57,796	0/0:15,0:15:45.15:0,45,629
chr10	44971727	.	C	CAT	2075.10	PASS	AB=0.929;AC=30;AF=0.536;AN=56;BaseQRankSum=5.690;DP=511;FS=3.801;HRun=0;HaplotypeScore=100.5240;InbreedingCoeff=0.5955;MQ=53.83;MQ0=27;MQRankSum=-0.205;QD=6.48;ReadPosRankSum=0.667;VQSLOD=3.1088;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,0:11:8.97:71,9,0	0/1:16,0:12:13.79:14,0,32	0/1:12,0:4:1.60:2,0,3	0/1:16,0:4:1.09:1,0,7	1/1:25,0:21:19.01:128,19,0	0/0:16,0:16:26.95:0,27,230	0/0:14,0:14:26.83:0,27,213	0/0:29,0:26:56.85:0,57,461	0/0:17,0:15:29.99:0,30,283	1/1:5,15:17:38.53:345,39,0	1/1:7,16:22:3.01:51,3,0	0/0:18,0:18:31.68:0,32,270	0/0:13,0:13:26.94:0,27,242	0/0:17,0:16:38.93:0,39,349	1/1:24,2:20:41.98:409,42,0	0/1:18,0:14:11.82:106,0,12	1/1:13,0:11:5.91:39,6,0	0/1:4,11:14:15.23:114,0,15	1/1:12,0:6:9:78,9,0	1/1:28,0:25:33.57:222,34,0	1/1:14,0:14:17.96:144,18,0	0/0:19,0:19:38.96:0,39,344	0/0:19,0:19:5.57:0,6,217	0/0:29,0:29:62.14:0,62,527	1/1:8,20:27:9.04:151,9,0	1/1:17,0:11:27.55:206,28,0	1/1:17,0:15:24.01:157,24,0	0/1:6,0:6:3.36:38,0,3
chr10	44971736	.	ATGTGTGTGTGTGTGTGTGTGTGTGTG	A	4169.45	PASS	AB=0.690;AC=13;AF=0.250;AN=52;BaseQRankSum=8.043;DP=513;FS=2.738;HRun=0;HaplotypeScore=240.6527;InbreedingCoeff=0.7048;MQ=48.44;MQ0=32;MQRankSum=-2.822;QD=37.23;ReadPosRankSum=-0.180;VQSLOD=2.5015;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:8,2:9:6:162,6,0	0/0:12,0:12:9.50:0,10,465	./.	0/0:12,0:2:3:0,3,25	1/1:15,8:19:12.04:745,12,0	0/0:19,0:18:18.06:0,18,1782	0/0:13,0:12:9.03:0,9,965	0/0:29,0:21:21.07:0,21,1077	0/0:22,0:18:20.79:0,21,2062	0/0:24,0:21:40.32:0,40,3770	0/0:20,0:19:6.02:0,6,648	0/0:20,0:19:21.07:0,21,2074	0/0:15,0:15:18.06:0,18,1850	0/0:18,0:16:29.31:0,29,2630	0/0:23,0:21:24.05:0,24,2025	0/0:6,0:16:9.03:0,9,1015	0/0:10,0:9:6.02:0,6,571	0/0:15,0:14:12.04:0,12,1204	1/1:9,2:6:3.01:52,3,0	1/1:17,9:23:21.07:1419,21,0	./.	0/0:20,0:20:21.07:0,21,2248	0/0:23,0:21:30.57:0,31,2955	0/0:31,0:31:39.13:0,39,3679	0/0:25,0:24:18.06:0,18,2066	0/1:11,9:14:99:530,0,249	1/1:10,6:14:14.71:834,15,0	1/1:5,1:5:9:427,9,0
chr10	44971852	.	G	GC	1459.86	PASS	AC=14;AF=0.280;AN=50;BaseQRankSum=-7.363;DP=514;FS=5.375;HRun=1;HaplotypeScore=58.1827;InbreedingCoeff=0.9326;MQ=44.88;MQ0=78;MQRankSum=3.900;QD=18.02;ReadPosRankSum=-3.347;VQSLOD=2.7343;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:14:36.07:0,36,448	1/1:8,0:4:3:28,3,0	./.	./.	0/0:28,0:28:63.19:0,63,817	0/0:26,0:26:63.17:0,63,788	0/0:15,0:13:29.99:0,30,345	0/0:38,0:32:93.27:0,93,1174	0/0:23,0:22:57.18:0,57,734	1/1:0,19:5:15.05:224,15,0	1/1:1,13:8:18.06:269,18,0	0/0:21,0:21:45.14:0,45,580	0/0:22,0:22:50.88:0,51,643	0/0:16,0:16:45.12:0,45,568	1/1:0,18:14:39.13:578,39,0	1/1:1,12:6:18.06:270,18,0	./.	1/1:0,2:2:6.02:90,6,0	0/0:20,0:11:33.09:0,33,400	0/0:34,0:33:87.28:0,87,1128	0/0:15,0:13:36.06:0,36,447	0/0:21,0:20:48.16:0,48,622	0/0:18,0:18:36.10:0,36,453	0/0:12,0:11:24.06:0,24,296	1/1:0,7:4:12.04:180,12,0	0/0:19,0:19:57.17:0,57,714	0/0:25,0:25:66.18:0,66,833	0/0:27,0:22:60.05:0,60,707
chr10	44972637	.	T	TTCTC	4916.11	PASS	AB=0.707;AC=32;AF=0.667;AN=48;BaseQRankSum=-0.967;DP=551;FS=13.931;HRun=0;HaplotypeScore=124.8695;InbreedingCoeff=-0.1237;MQ=54.92;MQ0=12;MQRankSum=-0.932;QD=11.07;ReadPosRankSum=-0.777;VQSLOD=3.6445;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:14,11:27:35.56:143,0,36	0/0:10,0:9:5.94:0,6,41	0/0:15,0:10:3.01:0,3,36	0/0:27,0:17:2.33:0,2,46	0/1:16,10:30:37.79:107,0,38	0/1:13,6:23:9.35:156,0,9	0/1:10,3:13:39.99:65,0,40	1/1:26,0:26:4.73:56,5,0	1/1:12,0:20:6.02:104,6,0	1/1:14,1:21:27.09:502,27,0	0/1:9,10:21:29.44:267,0,29	1/1:14,0:14:15.03:261,15,0	1/1:12,0:16:3.01:52,3,0	./.	./.	1/1:14,0:22:12.04:217,12,0	./.	1/1:8,0:8:9.03:144,9,0	1/1:15,3:18:4.61:303,5,0	0/1:14,12:28:21.40:433,0,21	0/1:9,8:19:32.06:270,0,32	1/1:11,0:12:3.01:63,3,0	./.	0/1:9,1:12:0.01:0,0,0	1/1:10,1:17:3.01:40,3,0	0/1:20,12:36:53.79:1035,0,54	0/1:17,5:24:65.59:281,0,66	1/1:18,7:26:1.94:419,2,0
chr10	44972673	.	CGTGT	C	56.66	PASS	AC=2;AF=0.037;AN=54;BaseQRankSum=2.078;DP=533;FS=0.000;HRun=0;HaplotypeScore=119.3129;InbreedingCoeff=0.7335;MQ=50.44;MQ0=17;MQRankSum=-3.026;QD=7.08;ReadPosRankSum=2.149;VQSLOD=2.4790;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:26:33.10:0,33,708	1/1:3,5:7:5.37:136,5,0	0/0:27,0:10:24.08:0,24,489	0/0:29,0:9:18.06:0,18,424	0/0:27,0:27:33.09:0,33,745	0/0:29,0:29:59.73:0,60,1380	0/0:12,0:11:30.10:0,30,675	0/0:18,0:17:42.03:0,42,915	0/0:18,0:17:17.98:0,18,382	0/0:22,0:21:50.89:0,51,1017	0/0:23,0:24:50.56:0,51,1048	0/0:11,0:11:18.06:0,18,408	0/0:11,0:10:9.03:0,9,215	0/0:18,0:18:20.66:0,21,457	0/0:10,0:10:15.05:0,15,373	0/0:21,0:21:33.11:0,33,811	./.	0/0:6,0:5:12.04:0,12,264	0/0:17,0:16:36.08:0,36,733	0/0:28,0:28:54.59:0,55,1200	0/0:21,0:21:42.10:0,42,877	0/0:18,0:19:30.10:0,30,712	0/0:17,0:17:18.06:0,18,427	0/0:15,0:15:15.04:0,15,373	0/0:21,0:20:33.11:0,33,816	0/0:31,0:32:67.92:0,68,1238	0/0:21,0:21:50.18:0,50,1042	0/0:17,0:17:45.15:0,45,983
chr10	44972791	.	A	AAT	2821.66	PASS	AB=0.545;AC=17;AF=0.315;AN=54;BaseQRankSum=-7.465;DP=595;FS=8.882;HRun=0;HaplotypeScore=96.1399;InbreedingCoeff=0.8815;MQ=67.70;MQ0=2;MQRankSum=-0.374;QD=20.90;ReadPosRankSum=-0.159;VQSLOD=3.4210;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:37:72:0,72,877	0/1:2,10:12:7.10:413,0,7	1/1:9,0:6:0.89:2,1,0	0/0:21,0:19:22.53:0,23,206	0/0:22,0:23:50.99:0,51,609	0/0:30,0:31:69.05:0,69,832	0/0:19,0:19:42.12:0,42,507	0/0:29,0:30:66:0,66,754	1/1:7,15:23:30.10:492,30,0	0/0:26,0:26:63.20:0,63,781	0/0:30,0:32:84.06:0,84,992	1/1:7,11:18:21.07:344,21,0	1/1:0,19:20:39.13:639,39,0	1/1:2,12:16:15.05:238,15,0	0/0:23,0:23:63.16:0,63,764	0/0:25,0:25:57.18:0,57,705	./.	0/0:14,0:15:41.96:0,42,495	0/0:15,0:15:33.10:0,33,409	0/0:31,0:32:84.08:0,84,1005	0/0:32,0:32:78.25:0,78,967	1/1:6,5:11:9.03:148,9,0	1/1:6,12:18:27.09:443,27,0	1/1:1,6:8:18.06:295,18,0	0/0:19,0:19:36.07:0,36,409	0/0:34,0:35:99:0,105,1268	0/0:25,0:24:66.21:0,66,818	0/0:19,0:19:45.14:0,45,558
chr10	44973211	.	CA	C	2944.35	PASS	AC=14;AF=0.259;AN=54;BaseQRankSum=11.325;DP=667;FS=0.783;HRun=9;HaplotypeScore=73.5325;InbreedingCoeff=0.9889;MQ=67.92;MQ0=1;MQRankSum=0.193;QD=19.63;ReadPosRankSum=0.574;VQSLOD=4.0009;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:81.23:0,81,925	1/1:1,8:9:21.01:191,21,0	0/0:21,0:18:33.96:0,34,367	0/0:10,0:10:16.50:0,17,156	0/0:37,1:38:65.83:0,66,1011	0/0:20,0:20:57.13:0,57,635	0/0:15,0:15:36.07:0,36,401	0/0:32,0:32:69.90:0,70,847	0/0:29,0:29:61.29:0,61,694	1/1:3,23:26:69:621,69,0	1/1:6,21:27:38.58:524,39,0	0/0:26,0:26:51.15:0,51,585	0/0:23,0:23:63.13:0,63,688	0/0:22,0:22:57.14:0,57,639	1/1:0,13:13:39.02:357,39,0	1/1:6,14:20:10.40:350,10,0	./.	1/1:1,21:21:45.02:412,45,0	0/0:23,0:23:51.14:0,51,580	0/0:44,2:46:65.53:0,66,1259	0/0:14,0:14:36.10:0,36,407	0/0:32,0:32:81.24:0,81,933	0/0:33,0:33:93.27:0,93,1068	0/0:18,0:19:53.99:0,54,603	1/1:2,31:33:73.30:684,73,0	0/0:35,0:35:88.81:0,89,1000	0/0:30,0:30:84.02:0,84,909	0/0:18,0:18:42.09:0,42,462
chr10	44974359	.	A	AC	81.30	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.458;DP=582;FS=1.147;HRun=0;HaplotypeScore=59.3618;InbreedingCoeff=0.7812;MQ=56.87;MQ0=4;MQRankSum=-3.112;QD=6.25;ReadPosRankSum=-1.612;VQSLOD=3.1073;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,99,1325	1/1:3,0:2:5.64:26,6,0	0/0:19,0:16:47.17:0,47,591	0/0:12,0:12:32.98:0,33,342	0/0:27,0:27:78.14:0,78,1017	0/0:15,0:15:42.11:0,42,540	0/0:16,0:16:48.10:0,48,594	0/0:21,0:20:63.17:0,63,796	0/0:25,0:24:72.24:0,72,1003	0/0:28,2:28:84.26:0,84,1134	0/0:16,2:17:8.04:0,8,581	0/0:16,0:16:45.14:0,45,613	0/0:24,0:24:72.21:0,72,981	0/0:19,0:19:54.12:0,54,685	0/0:14,0:14:42.12:0,42,553	0/0:25,1:26:31.83:0,32,905	1/1:0,10:8:12.04:159,12,0	0/0:18,0:18:48.90:0,49,571	0/0:18,0:18:51.15:0,51,683	0/0:33,0:33:99:0,99,1375	0/0:17,0:17:51.13:0,51,673	0/0:27,0:27:67.69:0,68,923	0/0:27,0:27:69.17:0,69,916	0/0:21,0:21:63.15:0,63,840	0/0:27,2:29:0.65:0,1,975	0/0:26,0:26:78.23:0,78,1042	0/0:21,0:21:63.16:0,63,823	0/0:16,0:16:48.16:0,48,669
chr10	44974413	.	T	TA	64.82	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.709;DP=583;FS=0.000;HRun=9;HaplotypeScore=57.1347;InbreedingCoeff=0.6079;MQ=49.68;MQ0=12;MQRankSum=-2.212;QD=9.26;ReadPosRankSum=-2.103;VQSLOD=1.3028;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,105,903	1/1:2,5:6:15.01:153,15,0	0/0:11,0:1:3:0,3,25	0/0:16,0:4:9:0,9,78	0/0:28,0:28:68.77:0,69,591	0/0:24,0:24:59.95:0,60,517	0/0:16,0:16:44.98:0,45,391	0/0:21,0:21:50.96:0,51,440	0/0:26,0:26:74.98:0,75,651	0/0:32,0:32:86.95:0,87,750	0/0:16,0:16:41.95:0,42,358	0/0:21,0:21:56.98:0,57,495	0/0:18,0:18:47.99:0,48,417	0/0:11,1:12:2.98:0,3,253	0/0:15,0:15:35.96:0,36,309	0/0:22,0:22:65.97:0,66,569	0/0:3,0:2:3:0,3,26	0/0:12,0:12:32.99:0,33,286	0/0:18,0:18:47.98:0,48,414	0/0:31,0:31:74.90:0,75,642	0/0:18,0:18:50.99:0,51,443	0/0:28,0:28:65.93:0,66,562	0/0:22,0:22:53.93:0,54,461	0/0:26,0:26:59.96:0,60,521	0/0:29,0:30:64.94:0,65,545	0/0:27,0:27:68.96:0,69,593	0/0:25,0:25:71.94:0,72,618	0/0:16,0:16:47.99:0,48,417
chr10	44976338	.	AT	A	90.57	PASS	AC=2;AF=0.037;AN=54;BaseQRankSum=3.836;DP=544;FS=3.504;HRun=4;HaplotypeScore=58.5699;InbreedingCoeff=0.9801;MQ=72.26;MQ0=0;MQRankSum=-1.829;QD=18.11;ReadPosRankSum=1.646;VQSLOD=3.0815;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,132,1731	1/1:0,5:5:15.05:179,15,0	0/0:18,0:18:46.21:0,46,512	0/0:16,0:15:28.85:0,29,336	0/0:37,0:37:99:0,99,1296	0/0:17,0:17:51.16:0,51,694	0/0:10,0:10:30.09:0,30,402	0/0:30,0:30:90.30:0,90,1256	0/0:21,0:21:60.18:0,60,806	0/0:23,0:23:66.10:0,66,894	0/0:24,0:24:66.17:0,66,871	0/0:18,0:18:54.16:0,54,720	0/0:14,0:14:39.12:0,39,530	0/0:13,0:13:39.13:0,39,546	0/0:10,0:10:30.08:0,30,388	0/0:11,0:11:30.05:0,30,382	./.	0/0:26,0:26:78.19:0,78,1048	0/0:23,0:23:63.17:0,63,818	0/0:33,0:33:96.29:0,96,1286	0/0:14,0:14:42.13:0,42,570	0/0:12,0:12:30.10:0,30,416	0/0:21,0:21:57.13:0,57,738	0/0:14,0:14:39.07:0,39,523	0/0:21,0:21:51.15:0,51,679	0/0:27,0:27:78.25:0,78,1075	0/0:30,0:30:84.26:0,84,1142	0/0:10,0:10:27.09:0,27,377
chr10	44976807	.	A	AGTC	676.42	PASS	AC=2;AF=0.037;AN=54;BaseQRankSum=4.631;DP=664;FS=0.000;HRun=0;HaplotypeScore=132.6485;InbreedingCoeff=0.9956;MQ=73.66;MQ0=0;MQRankSum=-4.980;QD=61.49;ReadPosRankSum=2.203;VQSLOD=4.5346;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,132,2385	1/1:0,11:11:33.11:771,33,0	0/0:17,0:17:51.17:0,51,892	0/0:28,0:27:73.03:0,73,1285	0/0:18,0:18:54.19:0,54,999	0/0:17,0:17:48.12:0,48,856	0/0:30,0:30:87.29:0,87,1590	0/0:30,0:30:87.26:0,87,1525	0/0:19,0:19:57.16:0,57,992	0/0:28,0:28:81.27:0,81,1475	0/0:23,0:23:63.22:0,63,1168	0/0:29,0:29:81.27:0,81,1468	0/0:20,0:20:60.21:0,60,1114	0/0:22,0:22:60.21:0,60,1114	0/0:35,0:35:87.24:0,87,1543	0/0:37,0:37:99:0,111,2052	./.	0/0:27,0:27:81.28:0,81,1495	0/0:29,0:29:84.28:0,84,1516	0/0:20,1:21:60.21:0,60,1117	0/0:30,0:30:87.27:0,87,1544	0/0:20,0:20:60.20:0,60,1084	0/0:23,0:23:66.21:0,66,1199	0/0:28,0:27:75.26:0,75,1386	0/0:12,0:12:36.11:0,36,625	0/0:33,0:33:99:0,99,1737	0/0:25,0:25:75.26:0,75,1386	0/0:7,0:7:21.07:0,21,392
chr10	44978336	.	TA	T	2637.17	PASS	AB=0.560;AC=11;AF=0.212;AN=52;BaseQRankSum=9.523;DP=520;FS=4.208;HRun=4;HaplotypeScore=45.7575;InbreedingCoeff=0.8399;MQ=49.14;MQ0=43;MQRankSum=2.333;QD=24.19;ReadPosRankSum=2.129;VQSLOD=2.4159;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:35:99:0,99,1361	0/0:9,0:3:9.03:0,9,126	./.	0/0:7,0:3:8.51:0,9,80	0/0:25,0:22:54.09:0,54,699	0/0:20,0:20:54.18:0,54,756	0/0:10,0:9:21.06:0,21,277	0/0:28,0:24:66.17:0,66,874	0/0:19,1:20:18.25:0,18,660	1/1:2,18:17:48.15:576,48,0	1/1:2,28:23:57.17:683,57,0	0/0:18,0:18:45.14:0,45,615	0/0:12,0:12:30.10:0,30,414	0/0:6,0:6:15.05:0,15,210	1/1:0,15:15:39.12:468,39,0	0/1:3,11:13:53.94:258,0,54	./.	1/1:1,9:10:24.07:282,24,0	0/0:14,0:12:8.46:0,8,396	0/0:43,0:34:87.19:0,87,1156	0/0:10,0:9:21.06:0,21,281	0/0:22,0:22:60.20:0,60,830	0/0:27,0:27:63.10:0,63,835	0/0:20,0:20:54.15:0,54,721	1/1:1,19:18:48.08:545,48,0	0/0:21,0:19:54.17:0,54,742	0/0:33,0:30:72.23:0,72,991	0/0:12,0:10:27.05:0,27,341
chr10	44978653	.	ATCATCATCATCGTCG	A	366.50	PASS	AB=1.000;AC=8;AF=0.154;AN=52;BaseQRankSum=5.133;DP=572;FS=0.000;HRun=0;HaplotypeScore=191.7714;InbreedingCoeff=0.4208;MQ=45.93;MQ0=74;MQRankSum=-5.029;QD=4.64;ReadPosRankSum=-2.333;VQSLOD=2.2492;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:6:0.68:0,1,89	1/1:6,0:2:6.02:76,6,0	0/0:37,0:18:54.19:0,54,1971	0/0:35,0:20:59.96:0,60,1648	0/0:17,2:15:3.01:0,3,81	0/0:23,0:20:42.14:0,42,2152	0/0:24,0:22:51.17:0,51,2233	0/0:32,0:22:54.01:0,54,1487	0/0:25,0:25:66.22:0,66,3923	0/0:12,0:11:27.09:0,27,1217	0/1:14,0:9:0:0,0,0	0/0:27,0:26:63.22:0,63,3292	0/0:33,0:31:66.23:0,66,3241	0/0:24,0:24:57.20:0,57,3173	0/0:32,0:29:33.09:0,33,1169	0/0:27,0:24:36.58:0,37,1054	./.	0/0:20,0:13:24.08:0,24,657	1/1:11,6:10:15.02:183,15,0	0/1:19,0:17:1.66:2,0,35	./.	0/0:11,0:10:21.07:0,21,1054	0/0:9,0:9:21.07:0,21,1256	0/0:34,0:34:84.29:0,84,3743	0/0:14,0:14:15.05:0,15,237	0/1:13,0:11:99:185,0,126	0/0:25,1:20:24.76:0,25,753	0/1:10,0:7:43.38:43,0,189
chr10	44978665	.	G	GTCA	788.63	PASS	AB=0.845;AC=13;AF=0.250;AN=52;BaseQRankSum=7.672;DP=611;FS=2.797;HRun=0;HaplotypeScore=122.1267;InbreedingCoeff=0.6436;MQ=46.04;MQ0=46;MQRankSum=-6.745;QD=5.76;ReadPosRankSum=-0.121;VQSLOD=2.8699;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:7,6:7:3.01:57,3,0	0/0:6,0:2:5.81:0,6,33	0/0:45,0:25:66.15:0,66,1034	0/0:51,0:27:71.74:0,72,1099	1/1:13,11:21:3.01:59,3,0	0/0:22,0:20:48.16:0,48,774	0/0:21,0:20:51.17:0,51,834	0/0:31,0:27:72.05:0,72,1064	0/0:30,0:30:75.24:0,75,1220	0/1:15,0:14:11.45:11,0,408	0/0:18,0:11:0:0,0,0	0/0:26,0:25:63.22:0,63,1056	0/0:31,0:29:69.22:0,69,1107	0/0:28,0:28:60.20:0,60,983	0/0:28,0:26:33.11:0,33,544	0/0:27,0:25:35.91:0,36,560	./.	0/0:17,0:13:21.95:0,22,299	1/1:13,0:7:12.48:128,12,0	0/1:9,12:19:0:0,0,0	./.	0/0:14,0:11:27.09:0,27,440	0/0:13,0:12:27.09:0,27,440	0/0:35,0:35:87.27:0,87,1394	0/0:13,0:13:10.15:0,10,141	1/1:14,0:10:6.06:113,6,0	1/1:12,16:24:26.98:489,27,0	0/1:8,1:6:4.63:84,0,5
chr10	44978689	.	ATCGTCG	A	383.35	PASS	AB=0.914;AC=12;AF=0.240;AN=50;BaseQRankSum=7.118;DP=635;FS=1.797;HRun=0;HaplotypeScore=150.0903;InbreedingCoeff=0.3290;MQ=42.11;MQ0=36;MQRankSum=-4.493;QD=2.54;ReadPosRankSum=-1.390;VQSLOD=2.4847;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:12,2:8:0.68:0,1,33	1/1:2,2:2:6.02:119,6,0	0/0:40,0:22:59.46:0,59,1009	0/0:59,0:31:76.40:0,76,1249	0/0:31,5:23:2.72:0,3,34	0/0:25,0:24:45.05:0,45,1207	0/0:19,0:19:51.05:0,51,1163	0/0:28,0:27:71.89:0,72,1134	0/0:31,0:31:66.21:0,66,2042	0/0:29,0:24:36.14:0,36,375	1/1:30,0:18:2.83:26,3,0	0/0:28,0:27:53.98:0,54,1378	0/0:22,0:22:51.15:0,51,1533	0/0:26,0:26:48.16:0,48,1661	0/1:20,0:15:10.86:11,0,130	0/0:18,0:14:12.02:0,12,259	./.	0/1:10,0:9:10.98:11,0,114	./.	1/1:24,3:13:6.10:32,6,0	./.	0/0:18,0:16:42.07:0,42,1015	0/0:22,0:21:51.03:0,51,1041	0/0:36,0:36:87.17:0,87,2130	1/1:17,0:17:1.60:12,2,0	0/1:13,3:8:15.75:232,0,16	0/1:20,6:21:79.45:79,0,235	0/0:3,0:3:6.02:0,6,93
chr10	44978695	.	G	GTCGTCATCATCATCATCA	4235.39	PASS	AB=0.855;AC=19;AF=0.396;AN=48;BaseQRankSum=2.539;DP=650;FS=7.788;HRun=0;HaplotypeScore=232.1000;InbreedingCoeff=0.6282;MQ=40.66;MQ0=38;MQRankSum=-6.031;QD=17.22;ReadPosRankSum=-0.383;VQSLOD=2.4276;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:9:2.74:12,3,0	0/0:3,0:2:6.02:0,6,125	0/0:37,0:21:52.70:0,53,975	0/0:60,0:30:80.33:0,80,1269	1/1:38,0:25:2.84:16,3,0	0/0:22,0:21:39.06:0,39,1199	0/0:21,0:21:56.97:0,57,1453	0/0:27,0:25:66.13:0,66,1238	0/0:29,0:29:69.14:0,69,2405	1/1:3,23:30:66.03:1991,66,0	1/1:33,0:19:2.51:118,3,0	0/0:27,0:26:48.13:0,48,1744	0/0:21,0:21:51.13:0,51,1904	0/0:28,0:28:57.54:0,58,1982	1/1:18,0:13:8.92:162,9,0	1/1:17,0:13:15.02:703,15,0	./.	0/1:3,5:12:3.07:257,0,3	./.	1/1:29,0:15:6.01:114,6,0	./.	0/0:22,0:20:54.13:0,54,1669	0/0:22,0:21:54.12:0,54,1497	0/0:34,0:34:78.23:0,78,2821	./.	0/1:16,0:8:30.94:414,0,31	1/1:27,0:22:32.11:438,32,0	0/1:3,0:3:11.65:12,0,60
chr10	44984803	.	CAAAAAACTG	C	352.28	PASS	AC=2;AF=0.040;AN=50;BaseQRankSum=3.811;DP=604;FS=0.000;HRun=0;HaplotypeScore=153.3532;InbreedingCoeff=0.9821;MQ=55.22;MQ0=44;MQRankSum=-3.730;QD=44.04;ReadPosRankSum=-0.302;VQSLOD=3.2756;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:90.31:0,90,4154	1/1:1,7:8:15.05:440,15,0	./.	./.	0/0:37,0:37:99:0,108,4925	0/0:15,0:15:42.13:0,42,1891	0/0:15,0:15:33.11:0,33,1578	0/0:9,0:9:27.09:0,27,1109	0/0:22,0:22:63.22:0,63,2796	0/0:32,0:31:90.26:0,90,3888	0/0:22,0:21:57.18:0,57,2533	0/0:20,0:19:51.18:0,51,2341	0/0:21,0:21:54.19:0,54,2502	0/0:22,0:21:63.20:0,63,2753	0/0:20,0:20:57.20:0,57,2484	0/0:25,0:25:75.26:0,75,3570	./.	0/0:16,0:16:48.16:0,48,2131	0/0:19,0:17:51.18:0,51,2289	0/0:29,0:29:81.27:0,81,3471	0/0:27,0:25:57.20:0,57,2549	0/0:22,0:22:54.19:0,54,2314	0/0:21,0:20:54.19:0,54,2393	0/0:36,0:36:99:0,99,4460	0/0:18,0:17:51.17:0,51,2188	0/0:27,0:27:69.23:0,69,3166	0/0:28,0:28:81.18:0,81,3311	0/0:12,0:11:30.10:0,30,1324
chr10	44985234	.	A	AAGAGAGAGAG	8416.07	PASS	AB=0.974;AC=44;AF=0.815;AN=54;BaseQRankSum=-0.644;DP=671;FS=5.321;HRun=0;HaplotypeScore=225.7088;InbreedingCoeff=0.6149;MQ=65.77;MQ0=11;MQRankSum=-4.305;QD=18.58;ReadPosRankSum=-0.900;VQSLOD=3.0036;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:28:14.37:193,14,0	0/1:2,0:2:0:0,0,0	0/0:69,0:38:22.10:0,22,368	0/0:110,0:51:19.09:0,19,483	1/1:10,0:17:4.42:76,4,0	0/0:25,0:28:42.06:0,42,1160	0/0:10,0:10:15.01:0,15,365	0/1:35,0:35:63.70:440,0,64	1/1:12,6:24:18.06:530,18,0	1/1:18,0:18:24.08:870,24,0	1/1:20,0:18:6.02:154,6,0	1/1:17,1:23:3.24:128,3,0	1/1:13,8:20:24.08:1031,24,0	1/1:13,6:21:18.53:804,19,0	1/1:22,0:21:19.62:617,20,0	1/1:16,0:22:15.78:440,16,0	./.	1/1:9,0:9:12.04:281,12,0	1/1:14,0:15:20.73:397,21,0	1/1:11,0:19:18.06:440,18,0	1/1:19,0:22:14.04:263,14,0	1/1:8,3:12:0.47:1,0,0	1/1:12,2:17:3.48:40,3,0	1/1:16,5:22:0.15:1,0,0	1/1:14,0:11:0.94:2,1,0	1/1:9,0:28:56:943,56,0	1/1:17,0:35:44.08:714,44,0	1/1:2,0:2:3.01:51,3,0
chr10	44985934	.	T	TC	235.46	PASS	AC=2;AF=0.037;AN=54;BaseQRankSum=3.087;DP=586;FS=5.442;HRun=0;HaplotypeScore=55.9610;InbreedingCoeff=0.9942;MQ=68.39;MQ0=1;MQRankSum=-2.634;QD=23.55;ReadPosRankSum=0.765;VQSLOD=4.8737;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:66.21:0,66,904	1/1:0,10:9:21.07:327,21,0	0/0:24,0:22:58.69:0,59,760	0/0:24,0:23:58.33:0,58,772	0/0:31,0:31:93.30:0,93,1283	0/0:29,0:29:87.27:0,87,1186	0/0:12,0:12:36.11:0,36,486	0/0:41,0:41:99:0,117,1592	0/0:24,0:24:69.23:0,69,964	0/0:31,0:31:93.31:0,93,1285	0/0:34,0:34:99:0,102,1392	0/0:12,0:12:36.11:0,36,484	0/0:11,0:11:33.10:0,33,432	0/0:16,0:16:48.15:0,48,642	0/0:13,0:13:39.13:0,39,545	0/0:12,0:12:36.11:0,36,486	./.	0/0:32,0:32:93.26:0,93,1244	0/0:18,0:18:54.16:0,54,710	0/0:35,0:35:99:0,105,1437	0/0:18,0:18:54.15:0,54,720	0/0:33,0:33:99:0,99,1340	0/0:15,0:15:45.09:0,45,563	0/0:20,0:20:60.14:0,60,742	0/0:21,0:20:60.19:0,60,824	0/0:21,0:21:63.17:0,63,806	0/0:18,0:18:51.15:0,51,683	0/0:9,0:9:27.09:0,27,377
chr10	44986969	.	A	AG	105.80	PASS	AC=2;AF=0.037;AN=54;BaseQRankSum=3.740;DP=722;FS=4.512;HRun=1;HaplotypeScore=70.0843;InbreedingCoeff=0.9683;MQ=67.74;MQ0=1;MQRankSum=-1.200;QD=13.23;ReadPosRankSum=0.733;VQSLOD=2.6131;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:58:99:0,172,2349	1/1:0,8:6:12.04:192,12,0	0/0:24,0:23:63.20:0,63,844	0/0:27,0:27:62.96:0,63,815	0/0:29,0:29:87.29:0,87,1213	0/0:28,0:28:84.28:0,84,1173	0/0:22,0:22:66.19:0,66,883	0/0:31,0:31:90.29:0,90,1236	0/0:31,0:31:90.30:0,90,1254	0/0:27,0:27:75.25:0,75,1042	0/0:17,0:17:51.17:0,51,713	0/0:21,0:21:63.20:0,63,863	0/0:32,0:32:96.32:0,96,1338	0/0:30,0:30:90.25:0,90,1205	0/0:34,0:34:96.32:0,96,1341	0/0:28,0:28:81.27:0,81,1128	./.	0/0:22,0:22:66.21:0,66,905	0/0:26,0:26:75.24:0,75,1032	0/0:34,0:34:99:0,102,1426	0/0:43,0:43:99:0,129,1799	0/0:25,0:25:75.17:0,75,1005	0/0:18,0:18:54.18:0,54,755	0/0:19,0:19:57.16:0,57,760	0/0:19,0:19:57.18:0,57,783	0/0:29,0:29:87.28:0,87,1201	0/0:29,0:29:87.27:0,87,1182	0/0:11,0:11:33.07:0,33,424
chr10	44988431	.	G	GCACA	2474.48	PASS	AB=0.722;AC=24;AF=0.462;AN=52;BaseQRankSum=0.964;DP=567;FS=1.326;HRun=0;HaplotypeScore=97.4699;InbreedingCoeff=0.2957;MQ=51.57;MQ0=16;MQRankSum=0.454;QD=7.26;ReadPosRankSum=-2.174;VQSLOD=1.4577;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:25,17:47:1.14:644,0,1	0/0:3,0:3:8.98:0,9,93	./.	0/0:32,0:7:3.01:0,3,47	0/1:8,7:17:29.23:273,0,29	0/1:4,0:11:22.39:22,0,26	0/1:18,0:33:81.33:81,0,196	0/0:19,0:18:3.01:0,3,47	0/0:21,0:23:24.02:0,24,292	1/1:14,0:14:11.97:155,12,0	1/1:15,0:15:6.02:100,6,0	0/0:14,0:14:18.05:0,18,258	0/0:13,0:14:5.74:0,6,74	0/0:10,0:12:12.03:0,12,167	1/1:22,0:13:6.02:100,6,0	1/1:16,0:14:3.01:52,3,0	./.	1/1:18,0:15:6.02:94,6,0	1/1:11,2:14:14.52:208,15,0	1/1:7,7:18:14.25:179,14,0	0/1:23,9:37:32.33:191,0,32	0/0:11,0:13:14.60:0,15,320	0/0:15,0:17:15.05:0,15,233	0/0:38,0:40:64.77:0,65,984	0/1:19,0:19:0.02:0,0,0	0/1:14,5:19:36.32:180,0,36	1/1:10,8:19:14.78:296,15,0	0/1:4,2:6:69.89:70,0,81
chr10	44990035	.	T	TTGTGTGTGTG	2099.97	PASS	AB=0.944;AC=12;AF=0.240;AN=50;BaseQRankSum=-2.677;DP=661;FS=6.949;HRun=0;HaplotypeScore=122.5149;InbreedingCoeff=0.6722;MQ=38.18;MQ0=129;MQRankSum=-4.424;QD=8.97;ReadPosRankSum=-3.657;VQSLOD=0.6967;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:10,0:10:21.94:0,22,289	0/1:52,0:10:3.83:4,0,70	0/0:48,0:3:6.02:0,6,75	0/0:10,0:12:3.01:0,3,69	0/0:20,0:15:30.10:0,30,715	0/0:31,0:27:62.53:0,63,1594	0/0:31,0:20:27.08:0,27,615	0/0:29,0:25:45.09:0,45,1137	1/1:23,7:24:33.11:962,33,0	0/1:15,4:15:0:1,0,0	0/0:15,0:16:36.08:0,36,867	0/0:16,0:18:42.13:0,42,1020	0/0:12,0:13:30.10:0,30,696	1/1:16,15:21:9.03:385,9,0	1/1:13,4:18:12.04:407,12,0	0/0:10,0:23:45.04:0,45,747	./.	0/1:15,0:3:0:0,0,0	./.	0/0:18,0:14:2.95:0,3,69	0/0:23,0:24:36.12:0,36,991	0/0:14,0:15:18.09:0,18,526	0/0:28,0:30:60.10:0,60,1296	1/1:26,12:35:15.02:484,15,0	0/0:4,0:9:11.82:0,12,172	0/0:7,0:3:0.47:0,0,1	0/1:7,0:7:0:0,0,0
chr10	44990037	.	G	GTT	529.45	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=3.639;DP=666;FS=0.000;HRun=3;HaplotypeScore=81.9574;InbreedingCoeff=0.2085;MQ=38.32;MQ0=123;MQRankSum=-2.587;QD=5.75;ReadPosRankSum=1.697;VQSLOD=-0.2370;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:4:5.91:0,6,38	1/1:1,10:11:10.20:389,10,0	0/0:57,0:11:25.07:0,25,221	0/0:54,0:3:9.02:0,9,114	0/0:16,0:11:2.98:0,3,22	0/0:25,0:16:1.97:0,2,306	0/0:32,0:26:71.99:0,72,931	0/0:33,0:21:60.03:0,60,682	0/0:34,0:27:48.04:0,48,641	0/0:33,0:23:18.71:0,19,328	0/0:22,0:16:8.91:0,9,95	0/0:18,0:16:36.09:0,36,499	0/0:19,0:18:42.11:0,42,605	0/0:16,0:13:32.94:0,33,395	0/0:37,0:21:1.10:0,1,68	0/0:25,0:19:2.34:0,2,76	0/1:24,0:21:99:233,0,220	0/0:14,0:6:5.88:0,6,36	0/0:16,0:3:5.98:0,6,48	0/1:14,0:9:0:0,0,0	0/0:19,0:14:20.76:0,21,155	0/0:24,0:24:42.07:0,42,568	0/0:15,0:15:7.53:0,8,307	0/0:28,0:28:66.09:0,66,879	0/1:43,0:35:10.68:11,0,73	0/0:14,0:9:14.89:0,15,111	0/0:10,0:3:2.96:0,3,19	0/0:7,0:7:8.96:0,9,73
chr10	44990631	.	TA	T	3880.91	PASS	AB=0.538;AC=29;AF=0.537;AN=54;BaseQRankSum=10.401;DP=585;FS=2.739;HRun=10;HaplotypeScore=59.6195;InbreedingCoeff=0.9298;MQ=51.15;MQ0=34;MQRankSum=-1.210;QD=11.41;ReadPosRankSum=3.275;VQSLOD=3.0584;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,31:33:43.24:388,43,0	./.	0/0:15,0:7:4.61:0,5,89	0/0:11,0:8:23.44:0,23,210	1/1:2,17:17:26.99:234,27,0	0/0:24,0:24:60.15:0,60,655	0/0:10,0:9:24.05:0,24,257	0/0:32,0:31:81.22:0,81,896	0/0:30,1:31:84.04:0,84,896	1/1:9,19:28:57.09:461,57,0	1/1:2,12:16:23.13:154,23,0	0/0:17,0:17:51.14:0,51,564	0/0:18,0:18:42.11:0,42,464	0/0:18,0:18:42.11:0,42,464	1/1:5,12:24:26.10:146,26,0	0/1:3,12:19:2:155,0,2	1/1:1,23:24:29.98:260,30,0	1/1:8,13:19:17.50:137,18,0	1/1:1,14:13:35.97:308,36,0	1/1:2,22:22:35.08:311,35,0	1/1:0,10:10:17.99:156,18,0	0/0:21,0:21:51.07:0,51,531	0/0:27,1:28:52.08:0,52,770	0/0:19,0:18:54.15:0,54,597	1/1:3,13:20:31.17:212,31,0	1/1:6,16:22:44.94:386,45,0	1/1:1,28:27:47.99:416,48,0	1/1:2,12:12:18:156,18,0
chr10	44991075	.	TA	T	3061.24	PASS	AB=0.524;AC=15;AF=0.278;AN=54;BaseQRankSum=8.028;DP=340;FS=0.964;HRun=7;HaplotypeScore=33.8900;InbreedingCoeff=0.8290;MQ=56.70;MQ0=3;MQRankSum=-0.068;QD=25.09;ReadPosRankSum=0.560;VQSLOD=3.3102;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,26:29:64.67:724,65,0	./.	0/0:6,0:3:6.02:0,6,75	0/0:6,0:4:12.04:0,12,150	1/1:0,16:16:42.09:428,42,0	0/0:9,0:9:24.08:0,24,302	0/0:3,0:3:9.03:0,9,113	0/0:21,0:21:57.17:0,57,703	0/0:12,0:11:30.05:0,30,359	0/0:24,0:24:63.20:0,63,793	0/0:23,0:22:54.17:0,54,679	0/0:7,0:7:21.07:0,21,264	0/0:3,0:3:6.02:0,6,75	0/0:8,0:8:18.06:0,18,226	0/0:9,0:9:21.07:0,21,264	0/0:12,0:12:24.08:0,24,302	0/0:25,0:25:72.23:0,72,906	0/0:25,0:25:69.18:0,69,838	1/1:0,14:14:42.10:428,42,0	1/1:1,10:11:27.06:275,27,0	1/1:0,5:5:15.03:153,15,0	0/0:1,0:1:3.01:0,3,38	0/0:6,0:6:15.05:0,15,189	0/0:2,0:2:6.02:0,6,75	0/0:15,0:15:39.12:0,39,491	0/1:1,10:11:4.68:266,0,5	1/1:1,14:15:42.10:428,42,0	1/1:0,21:21:54.12:551,54,0
chr10	44991461	.	C	CACACACACACACAG	3019.38	PASS	AB=1.000;AC=24;AF=0.444;AN=54;BaseQRankSum=1.134;DP=512;FS=21.958;HRun=0;HaplotypeScore=175.5443;InbreedingCoeff=0.4261;MQ=42.18;MQ0=24;MQRankSum=-1.078;QD=10.75;ReadPosRankSum=-3.184;VQSLOD=-0.0048;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:22:1.47:306,1,0	./.	0/0:14,0:5:11.50:0,12,92	0/0:24,0:4:8.91:0,9,75	1/1:9,0:10:8.98:72,9,0	0/0:27,0:25:35.63:0,36,1260	0/0:12,0:12:17.92:0,18,370	0/0:33,0:18:42.77:0,43,712	0/0:25,0:23:26.96:0,27,791	0/1:22,0:18:99:171,0,673	0/1:17,0:12:82.77:83,0,157	0/0:19,0:19:33.10:0,33,1034	0/0:11,0:11:17.92:0,18,470	0/0:17,0:16:30:0,30,736	0/1:31,0:24:54.24:54,0,353	0/1:20,0:16:99:105,0,714	1/1:12,0:8:2.68:18,3,0	0/1:17,0:13:89.04:89,0,578	1/1:7,0:4:12.03:325,12,0	1/1:6,0:5:5.91:50,6,0	1/1:22,0:14:23.22:204,23,0	0/0:11,0:11:27:0,27,447	0/0:8,0:8:6:0,6,105	0/0:28,0:27:42.07:0,42,1872	0/1:17,0:14:69.98:70,0,457	1/1:26,0:20:60.03:905,60,0	1/1:23,0:22:23.95:638,24,0	1/1:5,4:13:14.97:121,15,0
chr10	44991497	.	CAG	C	42.42	PASS	AB=0.939;AC=6;AF=0.111;AN=54;BaseQRankSum=2.920;DP=521;FS=4.729;HRun=0;HaplotypeScore=100.7948;InbreedingCoeff=0.1064;MQ=46.10;MQ0=22;MQRankSum=-0.561;QD=0.45;ReadPosRankSum=1.093;VQSLOD=1.3681;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:20:14.99:0,15,240	./.	0/0:22,0:4:5.49:0,5,65	0/0:32,0:13:13.95:0,14,140	0/1:21,0:19:5.82:6,0,402	0/0:20,1:20:24.06:0,24,345	0/0:17,0:17:23.68:0,24,356	0/0:30,0:21:48.10:0,48,657	0/0:19,0:19:18.02:0,18,619	0/1:19,1:15:42.11:42,0,334	0/0:16,0:14:24.08:0,24,383	0/0:16,1:17:27:0,27,419	0/0:14,0:14:18.06:0,18,273	0/0:10,0:10:18.03:0,18,262	0/0:25,0:20:17.71:0,18,288	0/0:15,0:11:21.07:0,21,293	1/1:13,0:9:2.75:12,3,0	0/0:17,0:15:31.72:0,32,502	0/0:12,0:6:18.06:0,18,288	0/0:17,0:17:45.15:0,45,686	0/0:20,1:19:9:0,9,598	0/0:11,0:11:27.09:0,27,423	0/0:14,0:14:27.05:0,27,384	0/0:22,1:22:42.04:0,42,638	0/0:19,1:18:6:0,6,578	0/0:27,0:21:60.20:0,60,944	0/1:23,1:21:15.13:15,0,257	0/1:12,3:15:78.39:78,0,276
chr10	44994073	.	C	CT	1975.06	PASS	AB=0.726;AC=34;AF=0.607;AN=56;BaseQRankSum=-5.623;DP=451;FS=6.454;HRun=14;HaplotypeScore=59.7095;InbreedingCoeff=-0.0303;MQ=66.99;MQ0=5;MQRankSum=0.970;QD=5.00;ReadPosRankSum=0.006;VQSLOD=1.7024;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,13:21:10.60:84,11,0	1/1:0,1:1:3:26,3,0	0/0:18,0:10:10.07:0,10,50	0/1:14,0:9:3.27:3,0,61	0/1:16,12:29:29:134,0,29	0/0:13,0:15:21.68:0,22,127	0/0:8,0:8:11.79:0,12,77	0/1:25,1:28:6.63:7,0,168	0/1:7,5:12:17.47:17,0,30	1/1:8,8:16:2.15:128,2,0	0/1:10,10:23:47.55:118,0,48	0/1:2,5:8:9.48:33,0,9	1/1:3,8:11:8.98:75,9,0	0/1:4,7:11:3.86:84,0,4	1/1:4,9:13:11.99:103,12,0	1/1:2,5:8:6:53,6,0	0/0:4,0:13:14.25:0,14,41	0/1:7,6:13:7.27:67,0,7	1/1:6,6:12:14.97:126,15,0	0/1:13,14:28:21.08:176,0,21	0/1:6,6:12:9.38:45,0,9	0/1:10,6:15:23.58:57,0,24	0/1:7,12:22:5.64:131,0,6	0/1:7,1:9:10.26:37,0,10	1/1:6,9:18:12.49:127,12,0	1/1:12,11:26:13.28:197,13,0	0/1:10,12:23:8.09:85,0,8	1/1:3,12:18:26.30:230,26,0
chr10	44994637	.	C	CATATATAT	151.32	PASS	AB=1.000;AC=8;AF=0.160;AN=50;BaseQRankSum=0.107;DP=514;FS=3.016;HRun=0;HaplotypeScore=109.7515;InbreedingCoeff=0.4847;MQ=47.17;MQ0=23;MQRankSum=-1.070;QD=2.36;ReadPosRankSum=-3.436;VQSLOD=1.4652;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:20:21.03:0,21,438	./.	0/0:23,0:2:5.95:0,6,98	0/0:25,0:8:17.73:0,18,346	0/0:12,0:11:18.04:0,18,465	0/0:23,0:22:45.15:0,45,1150	0/0:16,0:16:33.08:0,33,793	0/0:22,0:21:57.14:0,57,1280	0/0:14,0:11:21.05:0,21,495	0/1:24,0:20:79.90:80,0,325	0/1:15,0:13:21.09:21,0,32	0/0:18,0:13:30.10:0,30,749	0/0:18,0:14:39.12:0,39,972	0/0:24,0:22:38.84:0,39,979	./.	1/1:17,0:10:3.35:26,3,0	1/1:1,3:4:3.48:71,3,0	1/1:3,0:1:3.01:76,3,0	0/0:21,0:19:39.05:0,39,797	0/0:24,0:22:42.06:0,42,978	0/0:38,0:38:81.28:0,81,2152	0/0:22,0:20:30.09:0,30,717	0/0:27,0:24:54.12:0,54,1255	0/0:19,0:17:29.48:0,29,633	./.	0/0:18,0:16:27.09:0,27,683	0/0:22,0:21:51.13:0,51,1261	0/0:9,0:9:27.05:0,27,561
chr10	44994644	.	ATGTGTGTG	A	561.16	PASS	AB=1.000;AC=15;AF=0.375;AN=40;BaseQRankSum=3.863;DP=512;FS=1.488;HRun=0;HaplotypeScore=95.8588;InbreedingCoeff=0.5774;MQ=43.61;MQ0=28;MQRankSum=-3.338;QD=3.62;ReadPosRankSum=-0.710;VQSLOD=1.5047;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:24:3.01:0,3,97	./.	./.	./.	0/0:14,0:13:6.02:0,6,157	0/0:23,0:23:26.72:0,27,788	0/0:15,0:12:6.02:0,6,219	0/0:21,0:20:2.99:0,3,24	1/1:7,6:10:3.01:75,3,0	0/0:20,0:16:9.92:0,10,286	./.	1/1:13,5:13:6.49:116,6,0	1/1:14,5:15:2.68:74,3,0	1/1:15,8:21:3.01:75,3,0	./.	0/1:15,0:8:0:0,0,0	./.	0/0:6,0:3:2.80:0,3,7	./.	0/0:16,0:22:15.03:0,15,292	0/0:40,0:42:21.03:0,21,449	1/1:14,8:21:6.02:130,6,0	1/1:22,5:24:6.02:150,6,0	1/1:12,5:14:3.01:74,3,0	./.	0/0:17,0:12:9.02:0,9,146	0/0:25,0:22:21.96:0,22,483	0/0:10,0:13:12.04:0,12,246
chr10	44995077	.	T	TTAAAA	288.09	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.579;DP=599;FS=0.000;HRun=0;HaplotypeScore=108.8462;InbreedingCoeff=0.9675;MQ=76.02;MQ0=0;MQRankSum=-3.363;QD=48.02;ReadPosRankSum=-1.489;VQSLOD=3.3430;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:54.18:0,54,1094	1/1:0,6:5:12.04:374,12,0	0/0:22,0:22:48.16:0,48,1020	0/0:24,0:24:60.12:0,60,1190	0/0:33,0:33:96.33:0,96,2011	0/0:20,0:20:54.18:0,54,1121	0/0:10,0:10:27.09:0,27,563	0/0:26,0:26:78.25:0,78,1533	0/0:20,0:20:60.20:0,60,1205	0/0:20,0:20:60.20:0,60,1240	0/0:25,0:24:69.24:0,69,1436	0/0:22,0:22:60.20:0,60,1242	0/0:18,0:18:48.15:0,48,941	0/0:18,0:18:48.16:0,48,990	0/0:25,0:25:72.23:0,72,1467	0/0:24,0:24:72.25:0,72,1506	0/0:21,0:21:63.22:0,63,1308	0/0:19,0:18:51.14:0,51,938	0/0:23,0:23:57.19:0,57,1192	0/0:30,0:29:87.30:0,87,1843	0/0:13,0:13:39.13:0,39,831	0/0:17,0:17:48.16:0,48,995	0/0:28,0:28:75.24:0,75,1546	0/0:20,0:20:60.21:0,60,1249	0/0:22,0:22:60.21:0,60,1222	0/0:30,0:30:87.30:0,87,1850	0/0:28,0:28:84.25:0,84,1709	0/0:15,0:15:45.15:0,45,959
chr10	44995551	.	GGTGTGT	G	855.38	PASS	AB=0.667;AC=13;AF=0.283;AN=46;BaseQRankSum=0.408;DP=281;FS=2.307;HRun=0;HaplotypeScore=77.7186;InbreedingCoeff=0.5858;MQ=70.40;MQ0=10;MQRankSum=-3.795;QD=11.56;ReadPosRankSum=-0.067;VQSLOD=1.6629;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,8:22:2.85:61,3,0	./.	0/0:21,0:14:3.01:0,3,41	./.	0/0:5,5:10:2.98:0,3,21	0/0:16,0:19:27.96:0,28,596	0/0:12,0:11:18.03:0,18,437	0/0:22,0:19:11.99:0,12,205	0/0:7,0:7:6:0,6,103	1/1:4,6:7:11.64:246,12,0	1/1:2,3:4:3:25,3,0	0/0:5,0:5:9.03:0,9,188	0/0:1,0:5:9.03:0,9,235	0/0:1,0:6:6.02:0,6,157	0/0:0,4:3:0:0,0,0	1/1:3,4:7:5.99:82,6,0	0/0:15,0:20:33.78:0,34,686	0/0:5,0:5:3.01:0,3,83	0/1:3,3:6:0.42:133,0,0	./.	./.	0/0:3,0:5:6.02:0,6,176	0/0:7,0:7:6.01:0,6,107	0/0:5,0:14:17.92:0,18,299	0/0:2,5:7:0:0,0,0	1/1:4,3:8:12.04:226,12,0	1/1:2,12:13:12.04:226,12,0	./.
chr10	44995623	.	T	TATATATATATATATATATATAC	3558.94	PASS	AB=1.000;AC=17;AF=0.607;AN=28;BaseQRankSum=1.666;DP=206;FS=3.185;HRun=0;HaplotypeScore=118.5948;InbreedingCoeff=0.6670;MQ=74.04;MQ0=2;MQRankSum=-4.957;QD=39.99;ReadPosRankSum=-0.193;VQSLOD=2.5549;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:10,0:10:5.82:138,6,0	./.	0/0:11,0:7:2.98:0,3,30	0/1:17,0:10:0:0,0,29	1/1:6,0:6:3:25,3,0	0/0:11,0:11:24.07:0,24,1115	0/0:8,0:8:21.05:0,21,766	0/0:29,0:29:51.17:0,51,2130	./.	./.	./.	./.	./.	./.	./.	./.	0/0:13,0:13:15.92:0,16,393	1/1:2,0:2:5.98:258,6,0	1/1:12,0:12:21.06:489,21,0	./.	1/1:4,0:4:2.72:12,3,0	./.	./.	./.	./.	1/1:9,0:8:18.04:571,18,0	1/1:18,0:18:2.93:415,3,0	1/1:6,4:11:27.09:1651,27,0
chr10	44995631	.	T	TATAC	604.55	PASS	AB=1.000;AC=7;AF=0.140;AN=50;BaseQRankSum=4.151;DP=180;FS=2.220;HRun=0;HaplotypeScore=51.4888;InbreedingCoeff=0.1062;MQ=71.75;MQ0=2;MQRankSum=-2.051;QD=10.42;ReadPosRankSum=2.570;VQSLOD=2.3337;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:6.45:0,6,48	0/0:1,0:1:3:0,3,25	0/1:5,0:4:0.80:1,0,24	0/1:14,0:7:0:0,0,29	0/0:7,0:7:8.98:0,9,73	0/0:13,0:13:26.16:0,26,411	0/0:8,0:8:24.02:0,24,385	0/0:28,0:28:78.18:0,78,1151	0/0:3,0:3:2.99:0,3,24	0/0:1,0:1:0:0,0,0	0/0:1,0:1:2.99:0,3,24	./.	./.	0/0:5,0:5:3:0,3,25	0/0:2,0:2:3:0,3,25	./.	1/1:3,8:11:30.01:627,30,0	0/1:2,0:2:14.95:27,0,15	0/0:9,0:9:15.38:0,15,117	0/0:8,0:7:5.99:0,6,50	0/0:4,0:4:0:0,0,0	0/0:2,0:2:3:0,3,25	0/0:3,0:3:3:0,3,25	0/0:6,0:6:5.99:0,6,48	0/0:2,0:2:3:0,3,26	0/0:8,0:7:17.14:0,17,122	0/1:15,0:15:2.04:2,0,85	0/1:11,0:11:54.15:54,0,75
chr10	44995801	.	T	TTG	10096.21	PASS	AB=0.712;AC=25;AF=0.446;AN=56;BaseQRankSum=-10.500;DP=757;FS=2.078;HRun=0;HaplotypeScore=113.9868;InbreedingCoeff=0.4680;MQ=57.46;MQ0=11;MQRankSum=1.406;QD=23.10;ReadPosRankSum=1.156;VQSLOD=5.0666;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:53:99:0,111,1251	0/0:6,0:6:15.05:0,15,181	0/0:40,0:25:30.09:0,30,356	0/1:45,0:30:20.74:21,0,135	1/1:6,16:22:54.18:863,54,0	0/0:10,0:11:29.91:0,30,328	0/0:29,0:30:58.28:0,58,687	0/0:45,0:44:74.19:0,74,827	0/1:5,21:26:13.32:624,0,13	0/0:16,0:16:39.12:0,39,470	0/0:9,0:11:26.87:0,27,267	1/1:6,18:25:14.98:721,15,0	1/1:5,12:17:27.09:430,27,0	0/1:10,17:27:60.41:567,0,60	0/0:31,0:33:74.89:0,75,860	0/1:9,1:12:15.29:15,0,294	0/0:37,0:37:86.04:0,86,951	0/0:21,0:22:22.01:0,22,528	1/1:7,3:9:12.04:193,12,0	1/1:7,16:23:42.14:675,42,0	1/1:47,54:100:99:3153,168,0	1/1:6,19:24:33.08:530,33,0	0/1:7,5:13:49.48:222,0,49	0/1:8,33:40:6.16:873,0,6	0/0:14,0:15:23.90:0,24,267	1/1:19,12:31:0.36:750,0,0	0/1:9,6:14:6.09:363,0,6	1/1:0,2:2:6.02:96,6,0
chr10	44995893	.	A	ATGTG	9884.62	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=-8.507;DP=735;FS=3.973;HRun=0;HaplotypeScore=125.4419;InbreedingCoeff=0.9099;MQ=57.69;MQ0=11;MQRankSum=0.112;QD=33.39;ReadPosRankSum=3.992;VQSLOD=4.9766;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,37:57:62.92:1584,63,0	1/1:0,5:4:9.03:227,9,0	0/0:39,0:21:51.16:0,51,789	0/1:30,0:20:20.15:20,0,622	1/1:4,18:22:35.85:905,36,0	0/0:20,0:20:57.16:0,57,919	0/0:37,0:38:81.60:0,82,1283	0/0:34,0:34:81.26:0,81,1337	0/0:40,0:41:99:0,117,1956	0/0:25,0:25:66.22:0,66,1110	0/0:13,0:12:36.12:0,36,618	0/0:28,0:28:75.24:0,75,1261	0/0:23,0:23:69.24:0,69,1180	0/0:31,0:31:84.29:0,84,1442	0/0:28,0:28:75.26:0,75,1287	0/0:22,0:22:66.23:0,66,1130	1/1:5,0:31:69.99:320,70,0	0/0:16,0:17:11.24:0,11,518	1/1:9,11:20:44.67:915,45,0	1/1:3,10:14:29.89:662,30,0	1/1:22,36:58:99:2390,102,0	0/0:17,0:18:42.12:0,42,697	0/0:13,0:13:36.11:0,36,590	0/0:33,0:33:72.21:0,72,1201	0/0:15,0:15:39.13:0,39,634	1/1:8,16:24:45.11:1026,45,0	1/1:2,18:23:56.72:1308,57,0	1/1:0,7:7:21.07:528,21,0
chr10	44997086	.	G	GAGGT	306.71	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=1.398;DP=618;FS=0.000;HRun=0;HaplotypeScore=106.0748;InbreedingCoeff=0.9824;MQ=66.39;MQ0=3;MQRankSum=-2.677;QD=30.67;ReadPosRankSum=1.299;VQSLOD=3.4242;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:87.25:0,87,1536	1/1:3,7:7:15.05:395,15,0	0/0:43,0:40:99:0,99,1771	0/0:33,0:30:76.50:0,77,1330	0/0:14,0:14:36.12:0,36,662	0/0:18,0:18:51.17:0,51,920	0/0:29,0:29:84.22:0,84,1396	0/0:19,0:19:48.15:0,48,846	0/0:28,0:28:72.23:0,72,1276	0/0:19,0:19:57.20:0,57,1041	0/0:11,0:11:27.09:0,27,497	0/0:21,0:21:57.20:0,57,1049	0/0:18,0:18:48.16:0,48,882	0/0:25,0:25:72.25:0,72,1324	0/0:25,0:25:69.24:0,69,1259	0/0:19,0:19:57.20:0,57,1048	0/0:22,0:22:60.21:0,60,1104	0/0:18,0:18:48.16:0,48,883	0/0:16,0:16:45.11:0,45,716	0/0:20,0:19:54.18:0,54,968	0/0:41,0:40:99:0,114,2095	0/0:18,0:18:33.11:0,33,606	0/0:15,0:15:36.12:0,36,661	0/0:24,0:24:69.24:0,69,1270	0/0:18,0:18:51.15:0,51,879	0/0:16,0:16:45.15:0,45,827	0/0:30,0:30:84.76:0,85,1545	0/0:15,0:15:42.14:0,42,773
chr10	45002949	.	T	TG	259.43	PASS	AB=0.857;AC=13;AF=0.260;AN=50;BaseQRankSum=5.434;DP=531;FS=6.567;HRun=3;HaplotypeScore=67.5090;InbreedingCoeff=0.7218;MQ=75.36;MQ0=6;MQRankSum=-4.959;QD=3.16;ReadPosRankSum=-1.388;VQSLOD=-0.6710;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:3,6:4:3.01:42,3,0	0/1:10,2:11:11.80:12,0,294	0/0:24,0:24:64.07:0,64,749	0/0:28,0:27:66.17:0,66,767	1/1:5,7:7:5.98:61,6,0	0/0:12,0:12:30.09:0,30,360	0/0:23,0:23:63.19:0,63,754	0/0:35,0:35:99:0,102,1224	0/0:30,0:30:84.25:0,84,996	0/0:24,0:24:72.22:0,72,864	0/0:22,0:22:51.15:0,51,610	0/0:14,0:14:42.12:0,42,492	0/0:27,0:27:75.23:0,75,899	0/0:23,0:23:69.21:0,69,825	0/0:29,0:29:78.20:0,78,919	0/0:16,0:16:45.14:0,45,540	./.	0/0:19,0:19:54.17:0,54,648	./.	./.	1/1:4,4:4:3.01:42,3,0	0/0:38,0:38:99:0,111,1319	0/0:30,0:30:87.25:0,87,1032	0/0:14,0:14:42.13:0,42,504	0/0:25,0:25:72.22:0,72,863	1/1:2,9:2:3.01:42,3,0	1/1:5,16:10:6.02:84,6,0	1/1:0,9:4:9.03:126,9,0
chr10	45003643	.	A	AG	2566.55	PASS	AC=16;AF=0.296;AN=54;BaseQRankSum=10.836;DP=492;FS=9.114;HRun=1;HaplotypeScore=63.9106;InbreedingCoeff=0.9435;MQ=65.59;MQ0=9;MQRankSum=-3.539;QD=32.90;ReadPosRankSum=-3.241;VQSLOD=1.5647;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,19:17:45.15:716,45,0	0/0:13,0:12:27.09:0,27,376	0/0:24,0:21:57.18:0,57,774	0/0:33,0:27:78.26:0,78,1084	1/1:0,12:9:27.09:430,27,0	0/0:22,0:22:57.03:0,57,712	0/0:21,0:21:60.20:0,60,838	0/0:25,0:25:75.20:0,75,997	0/0:25,0:25:75.17:0,75,985	0/0:24,0:24:72.18:0,72,946	0/0:17,0:17:45.15:0,45,622	0/0:14,0:14:42.12:0,42,564	0/0:18,0:18:54.18:0,54,754	0/0:8,0:8:21.07:0,21,293	0/0:18,0:18:51.16:0,51,695	0/0:23,0:23:69.23:0,69,964	./.	0/0:16,0:16:48.13:0,48,641	1/1:0,7:4:12.04:191,12,0	1/1:0,4:2:6.02:95,6,0	1/1:1,12:13:36.12:574,36,0	0/0:23,0:23:62.96:0,63,844	0/0:25,0:25:66.22:0,66,917	0/0:37,0:37:99:0,99,1367	0/0:28,0:28:75.22:0,75,1009	1/1:0,8:6:18.06:287,18,0	1/1:1,11:12:27.09:418,27,0	1/1:0,1:1:3.01:48,3,0
chr10	45003784	.	GAT	G	297.51	PASS	AC=2;AF=0.037;AN=54;BaseQRankSum=4.788;DP=605;FS=8.281;HRun=0;HaplotypeScore=72.4655;InbreedingCoeff=0.9533;MQ=52.77;MQ0=18;MQRankSum=-2.476;QD=29.75;ReadPosRankSum=3.402;VQSLOD=4.7791;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:36:99:0,102,2066	1/1:0,10:8:24.08:391,24,0	0/0:17,0:5:15.03:0,15,241	0/0:15,0:5:12.04:0,12,205	0/0:27,0:26:66.14:0,66,1257	0/0:23,0:23:69.07:0,69,1295	0/0:20,0:20:60.13:0,60,1138	0/0:25,0:25:72.03:0,72,1426	0/0:29,0:29:87.30:0,87,1766	0/0:25,0:25:75.26:0,75,1524	0/0:17,0:17:42.13:0,42,816	0/0:25,0:25:69.21:0,69,1362	0/0:26,0:26:72.20:0,72,1402	0/0:14,0:14:36.12:0,36,719	0/0:26,0:26:75.22:0,75,1425	0/0:20,0:20:60.21:0,60,1218	./.	0/0:13,0:13:39.13:0,39,792	0/0:17,0:16:45.15:0,45,900	0/0:25,0:24:63.22:0,63,1278	0/0:27,0:27:75.26:0,75,1506	0/0:26,0:26:54.05:0,54,1047	0/0:22,0:22:39.13:0,39,785	0/0:26,0:26:78.25:0,78,1545	0/0:24,0:24:69.22:0,69,1359	0/0:17,0:16:48.16:0,48,975	0/0:24,0:24:66.23:0,66,1316	0/0:26,0:26:75.17:0,75,1406
chr10	45006612	.	T	TAA	2678.07	PASS	AB=1.000;AC=22;AF=0.611;AN=36;BaseQRankSum=-1.314;DP=523;FS=4.161;HRun=1;HaplotypeScore=27.0601;InbreedingCoeff=0.5481;MQ=31.26;MQ0=153;MQRankSum=-3.320;QD=15.13;ReadPosRankSum=2.680;VQSLOD=1.1361;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,5:5:12.04:241,12,0	./.	0/0:35,0:2:2.74:0,3,12	0/1:38,0:4:9.09:9,0,41	1/1:12,1:1:3.01:61,3,0	./.	0/0:28,0:18:9.03:0,9,146	0/0:55,0:12:11.72:0,12,195	0/1:29,0:24:0.20:0,0,0	1/1:10,3:4:12.04:235,12,0	./.	0/0:26,0:22:3:0,3,49	0/0:23,0:20:5.90:0,6,97	0/0:29,0:27:3.24:0,3,49	1/1:1,14:15:39.13:789,39,0	1/1:3,8:9:27.06:506,27,0	./.	1/1:1,1:1:3.01:61,3,0	1/1:2,3:2:6.02:122,6,0	./.	./.	./.	./.	./.	1/1:12,2:2:6.02:121,6,0	1/1:7,4:4:12.04:243,12,0	1/1:3,7:7:21.07:425,21,0	./.
chr10	45011144	.	T	TAA	387	PASS	AC=10;AF=0.278;AN=36;BaseQRankSum=4.335;DP=86;FS=1.850;HRun=4;HaplotypeScore=17.2544;InbreedingCoeff=0.4859;MQ=77.98;MQ0=9;MQRankSum=-1.094;QD=27.64;ReadPosRankSum=1.911;VQSLOD=1.9108;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	1/1:0,1:1:3.01:53,3,0	0/0:5,0:3:3.48:0,3,39	0/0:12,0:7:2.88:0,3,15	./.	0/0:7,0:7:6.02:0,6,79	./.	0/0:16,0:10:29.91:0,30,292	0/0:1,0:1:3.01:0,3,40	./.	0/0:3,0:3:3.01:0,3,40	0/0:1,0:1:3.01:0,3,40	./.	0/0:3,0:3:9.02:0,9,105	0/0:4,0:3:6.02:0,6,80	0/0:1,0:1:3.01:0,3,40	1/1:0,7:8:18.06:315,18,0	0/0:6,0:6:15.01:0,15,180	1/1:0,0:1:3:28,3,0	./.	./.	0/0:1,0:1:3:0,3,25	./.	./.	0/0:3,0:3:9.03:0,9,120	1/1:0,0:1:3:28,3,0	1/1:1,0:3:9.01:84,9,0	./.
chr10	45011163	.	T	TATAA	776.52	PASS	AB=1.000;AC=15;AF=0.357;AN=42;BaseQRankSum=5.848;DP=132;FS=5.680;HRun=0;HaplotypeScore=26.7493;InbreedingCoeff=0.7573;MQ=72.46;MQ0=3;MQRankSum=-2.550;QD=18.49;ReadPosRankSum=-0.924;VQSLOD=2.1706;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:4:8.94:67,9,0	1/1:2,0:2:5.87:36,6,0	0/1:7,0:4:1.90:2,0,18	0/0:15,0:9:7.68:0,8,35	./.	0/0:7,0:7:9.02:0,9,138	./.	0/0:20,0:19:34.99:0,35,615	0/0:3,0:3:9:0,9,106	0/0:2,0:2:5.99:0,6,48	0/0:7,0:7:12:0,12,131	0/0:3,0:3:9:0,9,100	./.	0/0:3,0:3:9.02:0,9,135	0/0:5,0:4:12.01:0,12,163	0/0:4,0:3:12.01:0,12,146	1/1:11,0:11:29.37:198,29,0	0/0:5,0:5:12.04:0,12,227	1/1:4,1:5:14.95:158,15,0	1/1:4,0:4:8.90:60,9,0	./.	./.	0/0:4,0:4:9:0,9,90	./.	0/0:4,0:4:12.03:0,12,195	1/1:4,1:5:14.96:171,15,0	1/1:1,3:4:12.01:246,12,0	./.
chr10	45011512	.	ATCG	A	1201.89	PASS	AB=0.886;AC=26;AF=0.565;AN=46;BaseQRankSum=-0.645;DP=511;FS=2.786;HRun=0;HaplotypeScore=86.3260;InbreedingCoeff=0.5400;MQ=48.35;MQ0=43;MQRankSum=-1.482;QD=4.77;ReadPosRankSum=0.530;VQSLOD=2.1528;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	1/1:4,0:7:8.97:73,9,0	./.	0/0:28,0:16:0.47:0,0,1	./.	0/0:16,0:15:12:0,12,164	0/1:25,0:24:1.13:1,0,150	./.	1/1:7,10:16:3.01:40,3,0	0/0:11,0:10:5.95:0,6,75	0/0:6,0:6:2.99:0,3,24	1/1:10,10:20:17.84:220,18,0	1/1:12,7:17:2.85:40,3,0	1/1:9,12:21:12.04:162,12,0	0/0:2,0:19:2.57:0,3,22	0/0:2,0:19:2.92:0,3,21	0/0:43,0:43:80.69:0,81,908	0/0:1,0:22:5.97:0,6,58	0/1:12,0:16:0:0,0,0	./.	1/1:37,0:24:3:25,3,0	1/1:4,0:3:5.99:49,6,0	1/1:6,0:5:5.99:49,6,0	1/1:14,23:37:33.05:423,33,0	0/0:2,0:11:3.01:0,3,48	1/1:11,0:11:2.96:19,3,0	1/1:8,0:19:23.81:168,24,0	1/1:0,6:6:6.02:80,6,0
chr10	45013786	.	A	AT	10475.59	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=-10.307;DP=527;FS=6.758;HRun=3;HaplotypeScore=48.2082;InbreedingCoeff=0.9887;MQ=56.12;MQ0=3;MQRankSum=-2.395;QD=30.72;ReadPosRankSum=2.367;VQSLOD=4.4541;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,18:19:45.11:608,45,0	1/1:1,8:7:18.06:251,18,0	0/0:10,0:6:15.05:0,15,180	0/0:7,0:4:11.98:0,12,122	1/1:3,23:25:27.09:378,27,0	0/0:18,0:18:45.14:0,45,539	0/0:13,0:12:36.11:0,36,432	0/0:36,0:36:87.26:0,87,1034	0/0:9,0:9:21.06:0,21,251	1/1:2,30:32:93.31:1298,93,0	1/1:2,30:32:57.14:776,57,0	0/0:7,0:7:18.04:0,18,205	0/0:21,0:21:54.13:0,54,623	0/0:8,0:8:21.06:0,21,252	1/1:2,19:20:42.07:546,42,0	1/1:0,15:15:42.14:588,42,0	1/1:2,23:25:60.17:820,60,0	1/1:0,15:15:36.12:504,36,0	1/1:2,5:7:18.06:245,18,0	1/1:2,25:27:66.05:835,66,0	1/1:2,16:18:45.15:630,45,0	0/0:20,0:20:42.12:0,42,504	0/0:24,0:24:48.14:0,48,576	0/0:13,0:13:33.10:0,33,396	1/1:2,20:22:39.13:546,39,0	1/1:2,22:23:69.19:944,69,0	1/1:2,26:29:66.11:922,66,0	1/1:1,19:20:42.14:584,42,0
chr10	45013894	.	GT	G	2252.65	PASS	AB=0.765;AC=16;AF=0.286;AN=56;BaseQRankSum=9.568;DP=498;FS=0.000;HRun=10;HaplotypeScore=50.9588;InbreedingCoeff=0.7269;MQ=60.23;MQ0=4;MQRankSum=-0.339;QD=11.98;ReadPosRankSum=2.227;VQSLOD=2.7607;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,18:20:44.99:391,45,0	0/0:9,0:8:14.97:0,15,140	0/0:15,0:7:5.07:0,5,59	0/1:8,0:6:0.80:1,0,15	1/1:1,25:26:41.91:351,42,0	0/1:24,2:26:0.95:1,0,437	0/0:16,0:16:32.97:0,33,335	0/0:39,1:40:79.16:0,79,1050	0/0:12,0:12:18.05:0,18,199	0/0:18,0:17:36.05:0,36,384	0/0:24,2:26:28.08:0,28,529	0/0:14,0:14:39.11:0,39,431	0/0:17,0:17:39.11:0,39,431	0/0:11,0:11:24.04:0,24,249	0/0:12,0:11:30.08:0,30,330	0/0:21,0:21:54.11:0,54,572	0/0:15,0:14:20.85:0,21,200	0/0:17,0:17:48.13:0,48,531	0/1:3,12:12:3.19:204,0,3	1/1:2,23:25:59.94:515,60,0	1/1:5,10:15:17.99:156,18,0	0/0:16,0:17:26.91:0,27,280	0/0:26,0:26:59.93:0,60,623	0/0:11,0:12:29.90:0,30,305	0/0:12,0:12:27.04:0,27,281	0/1:5,14:19:48.57:311,0,49	1/1:4,18:20:35.57:303,36,0	1/1:4,8:12:23.99:208,24,0
chr10	45014473	.	G	GA	385.66	PASS	AB=0.929;AC=3;AF=0.054;AN=56;BaseQRankSum=-1.110;DP=562;FS=3.228;HRun=10;HaplotypeScore=74.4356;InbreedingCoeff=0.6523;MQ=53.36;MQ0=26;MQRankSum=0.247;QD=9.89;ReadPosRankSum=1.056;VQSLOD=2.8982;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:7:14.97:0,15,123	0/0:8,0:8:20.97:0,21,172	0/0:9,0:5:14.66:0,15,108	0/0:16,0:7:11.98:0,12,99	0/0:21,0:20:35.78:0,36,295	0/0:22,0:22:47.92:0,48,394	0/0:17,0:17:41.93:0,42,345	0/0:24,0:24:35.90:0,36,296	0/0:21,0:21:53.91:0,54,440	0/1:12,1:13:5.03:5,0,170	0/0:20,0:19:29.96:0,30,246	0/0:15,0:15:38.94:0,39,320	0/0:12,0:12:23.96:0,24,197	0/0:16,0:16:38.93:0,39,320	0/0:24,0:24:65.88:0,66,539	0/0:15,0:15:17.92:0,18,148	1/1:1,25:26:45.11:480,45,0	0/0:11,0:11:18.26:0,18,168	0/0:34,0:27:68.90:0,69,566	0/0:30,0:25:62.92:0,63,517	0/0:34,0:33:86.88:0,87,714	0/0:16,0:16:26.96:0,27,222	0/0:16,0:15:14.60:0,15,118	0/0:24,0:24:62.91:0,63,517	0/0:21,0:20:41.79:0,42,341	0/0:24,1:24:18.88:0,19,358	0/0:40,1:37:51.39:0,51,632	0/0:8,0:8:23.97:0,24,197
chr10	45015381	.	AGT	A	153.93	PASS	AB=0.625;AC=1;AF=0.020;AN=50;BaseQRankSum=3.504;DP=756;FS=7.543;HRun=0;HaplotypeScore=54.8605;InbreedingCoeff=-0.0430;MQ=22.80;MQ0=235;MQRankSum=1.340;QD=10.26;ReadPosRankSum=-1.319;VQSLOD=1.7413;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:62,0:28:21.03:0,21,343	0/1:6,9:10:83.64:228,0,84	./.	./.	0/0:24,0:21:20.92:0,21,377	0/0:28,0:16:18.06:0,18,323	0/0:26,0:8:6.02:0,6,105	0/0:32,0:12:33.11:0,33,583	0/0:26,0:15:15.05:0,15,269	0/0:42,0:35:99:0,108,1897	0/0:26,0:18:18.06:0,18,323	0/0:19,0:16:12.04:0,12,216	0/0:31,0:25:54.17:0,54,953	0/0:20,0:18:20.70:0,21,374	0/0:37,0:26:33.11:0,33,590	0/0:23,0:15:8.60:0,9,161	0/0:24,0:8:9.03:0,9,162	0/0:16,0:11:15.05:0,15,269	0/0:21,0:5:15.02:0,15,223	0/0:27,0:18:35.96:0,36,646	./.	0/0:24,0:23:23.93:0,24,431	0/0:23,0:19:21.07:0,21,377	0/0:28,0:7:6.02:0,6,108	0/0:16,0:8:21.07:0,21,377	0/0:29,0:19:57.20:0,57,1025	0/0:35,0:23:30.10:0,30,524	0/0:7,0:2:6.02:0,6,108
chr10	45016160	.	TG	T	1978.42	PASS	AC=12;AF=0.231;AN=52;BaseQRankSum=4.480;DP=670;FS=1.219;HRun=1;HaplotypeScore=54.4004;InbreedingCoeff=0.9314;MQ=35.06;MQ0=170;MQRankSum=0.642;QD=16.08;ReadPosRankSum=0.437;VQSLOD=3.6050;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:40:57.19:0,57,910	0/0:9,0:5:12.04:0,12,191	./.	./.	0/0:20,0:13:18.05:0,18,265	0/0:22,0:16:27.09:0,27,432	0/0:33,0:25:42.14:0,42,657	0/0:33,0:20:57.19:0,57,905	0/0:25,0:21:42.13:0,42,648	1/1:4,16:12:36.12:503,36,0	1/1:4,11:11:15.05:209,15,0	0/0:33,0:27:54.18:0,54,861	0/0:28,0:20:30.10:0,30,479	0/0:28,0:24:35.82:0,36,574	1/1:2,19:18:27.08:378,27,0	1/1:1,23:22:42.10:565,42,0	0/0:21,0:16:30.10:0,30,475	1/1:3,24:19:18.06:252,18,0	0/0:13,0:7:21.07:0,21,334	0/0:8,0:7:6.02:0,6,96	0/0:45,0:30:24.08:0,24,383	0/0:13,0:9:12.04:0,12,191	0/0:14,0:8:9.03:0,9,143	0/0:21,0:17:18.06:0,18,288	1/1:2,14:11:18.06:252,18,0	0/0:29,0:25:75.23:0,75,1173	0/0:28,0:22:27.09:0,27,422	0/0:17,0:9:9.03:0,9,144
chr10	45018257	.	C	CT	7150.64	PASS	AB=0.604;AC=28;AF=0.500;AN=56;BaseQRankSum=-11.099;DP=676;FS=6.239;HRun=11;HaplotypeScore=70.9776;InbreedingCoeff=0.7327;MQ=76.08;MQ0=0;MQRankSum=-0.564;QD=17.44;ReadPosRankSum=1.792;VQSLOD=5.9159;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,35:45:16.91:847,17,0	1/1:5,4:13:5.81:185,6,0	0/0:16,0:16:7.20:0,7,147	0/0:14,0:13:14.88:0,15,116	1/1:13,23:37:27.82:578,28,0	0/0:19,0:19:44.78:0,45,348	0/0:21,0:22:58.73:0,59,433	0/0:23,0:25:42.84:0,43,312	0/0:19,0:20:49.84:0,50,377	1/1:8,19:27:54.10:543,54,0	1/1:5,27:32:48.74:642,49,0	0/0:27,0:27:65.70:0,66,508	0/0:25,0:25:23.36:0,23,359	0/0:29,0:29:73.82:0,74,555	0/1:9,15:25:4.43:310,0,4	0/1:7,12:20:40.49:209,0,40	1/1:6,15:21:35.56:344,36,0	0/1:6,17:23:3.21:373,0,3	1/1:4,14:18:15.84:341,16,0	1/1:3,26:29:52.65:668,53,0	0/1:7,13:20:0.84:296,0,1	0/0:25,0:26:55.80:0,56,422	0/0:22,1:25:27.39:0,27,376	0/0:17,0:18:30.61:0,31,273	1/1:5,17:23:47.93:471,48,0	1/1:8,18:26:7.67:441,8,0	1/1:7,18:26:6.57:480,7,0	1/1:5,19:24:40.90:424,41,0
chr10	45018720	.	ACCTTG	A	104.67	PASS	AB=0.733;AC=1;AF=0.018;AN=56;BaseQRankSum=2.979;DP=629;FS=11.179;HRun=0;HaplotypeScore=112.4003;InbreedingCoeff=-0.0182;MQ=83.17;MQ0=0;MQRankSum=-2.941;QD=9.52;ReadPosRankSum=0.371;VQSLOD=2.0358;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:90.31:0,90,2998	0/1:7,4:11:99:179,0,642	0/0:21,0:21:63.22:0,63,2068	0/0:16,0:16:48.16:0,48,1572	0/0:29,0:29:84.27:0,84,2664	0/0:18,0:18:54.19:0,54,1799	0/0:26,0:26:78.27:0,78,2489	0/0:35,0:35:99:0,105,3214	0/0:25,0:25:75.26:0,75,2489	0/0:19,0:19:57.20:0,57,1875	0/0:14,0:14:42.14:0,42,1399	0/0:21,0:21:63.22:0,63,2071	0/0:26,0:26:78.24:0,78,2519	0/0:24,0:24:72.25:0,72,2399	0/0:20,0:20:60.21:0,60,1919	0/0:21,0:21:63.22:0,63,2099	0/0:24,0:24:69.24:0,69,2227	0/0:26,0:25:78.23:0,78,2514	0/0:18,0:18:54.19:0,54,1746	0/0:32,0:32:96.31:0,96,3037	0/0:23,0:23:69.24:0,69,2299	0/0:18,0:18:54.17:0,54,1699	0/0:27,0:27:81.23:0,81,2490	0/0:26,0:26:78.27:0,78,2598	0/0:22,0:22:66.23:0,66,2174	0/0:29,0:29:87.30:0,87,2848	0/0:18,0:17:54.19:0,54,1748	0/0:10,0:10:30.08:0,30,921
chr10	45021242	.	CTGATATCCT	C	11490.57	PASS	AB=0.519;AC=15;AF=0.268;AN=56;BaseQRankSum=16.931;DP=714;FS=8.925;HRun=0;HaplotypeScore=202.4187;InbreedingCoeff=0.8968;MQ=80.16;MQ0=0;MQRankSum=-14.060;QD=53.69;ReadPosRankSum=-1.184;VQSLOD=3.4596;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,43:45:81.28:2217,81,0	0/0:16,0:16:48.15:0,48,2110	0/0:20,0:20:60.19:0,60,2313	0/0:21,0:21:60.20:0,60,2149	1/1:3,27:30:63.06:1581,63,0	0/0:21,0:21:63.22:0,63,2950	0/0:32,0:32:93.28:0,93,3981	0/0:34,0:34:90.31:0,90,3886	0/0:30,0:30:84.27:0,84,3779	0/0:23,0:23:63.21:0,63,2836	0/0:27,0:27:81.26:0,81,3466	0/0:34,0:34:99:0,99,4661	0/0:14,0:14:39.13:0,39,1860	0/0:24,0:24:69.24:0,69,3194	0/0:29,0:29:87.28:0,87,3810	0/0:27,0:27:78.25:0,78,3506	0/0:22,0:22:60.21:0,60,2686	0/0:20,0:20:60.21:0,60,2664	1/1:3,10:13:30.06:750,30,0	1/1:2,36:38:93.27:2535,93,0	1/1:8,13:21:9.03:257,9,0	0/0:25,0:25:69.24:0,69,3133	0/0:29,0:29:78.25:0,78,3250	0/0:23,0:23:66.23:0,66,3029	0/0:29,0:29:84.29:0,84,3813	0/1:2,26:28:63.83:1887,0,64	1/1:5,27:32:60.12:1745,60,0	1/1:0,7:7:18.06:518,18,0
chr10	45021809	.	A	ATC	418.69	PASS	AB=1.000;AC=4;AF=0.071;AN=56;BaseQRankSum=9.205;DP=801;FS=0.000;HRun=0;HaplotypeScore=183.2117;InbreedingCoeff=0.5164;MQ=82.06;MQ0=3;MQRankSum=-9.779;QD=8.54;ReadPosRankSum=-1.100;VQSLOD=3.1486;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:26:12.60:0,13,53	1/1:2,17:19:40.60:512,41,0	0/0:60,0:50:31.26:0,31,975	0/0:84,0:60:67.83:0,68,940	0/0:25,0:25:19.51:0,20,100	0/0:39,0:39:96.30:0,96,1231	0/0:30,0:30:81.25:0,81,1037	0/0:55,0:55:99:0,132,1660	0/0:21,0:21:54.16:0,54,687	0/0:32,0:32:26.97:0,27,181	0/0:15,0:15:13.73:0,14,99	0/0:29,0:29:75.23:0,75,959	0/0:23,0:23:60.18:0,60,765	0/0:20,0:20:60.16:0,60,738	0/0:32,0:32:27.51:0,28,171	0/0:21,0:21:26.01:0,26,87	0/1:19,0:19:6.31:6,0,33	0/0:12,0:12:8.86:0,9,27	0/0:29,0:28:8.34:0,8,295	0/0:28,0:26:12.95:0,13,123	0/0:20,0:20:7.21:0,7,71	0/0:28,0:28:50.24:0,50,831	0/0:27,0:27:75.24:0,75,973	0/0:16,0:16:39.13:0,39,505	0/0:27,0:27:10.15:0,10,105	0/0:30,0:30:54.36:0,54,289	0/1:11,0:11:1.24:1,0,4	0/0:21,0:21:20.50:0,20,86
chr10	45021819	.	G	GTCTC	18214.01	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=-6.039;DP=782;FS=3.067;HRun=0;HaplotypeScore=151.1428;InbreedingCoeff=0.9989;MQ=79.64;MQ0=3;MQRankSum=-5.892;QD=50.18;ReadPosRankSum=5.221;VQSLOD=5.7223;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,23:27:38.92:955,39,0	1/1:6,12:18:44.89:881,45,0	0/0:57,0:48:63.02:0,63,1374	0/0:82,0:57:68.11:0,68,1115	1/1:6,17:23:39.13:1017,39,0	0/0:40,0:40:89.96:0,90,1549	0/0:30,0:30:81.24:0,81,1404	0/0:52,0:52:99:0,138,2440	0/0:17,0:17:48.16:0,48,872	1/1:3,25:29:78.24:1857,78,0	1/1:4,12:18:21.07:550,21,0	0/0:28,0:28:78.24:0,78,1356	0/0:21,0:21:54.18:0,54,974	0/0:21,0:21:54.18:0,54,932	1/1:4,26:30:66.04:1726,66,0	1/1:0,17:17:45.15:1178,45,0	1/1:2,23:26:45.15:1151,45,0	1/1:1,10:11:27.09:706,27,0	1/1:7,15:23:48.12:1031,48,0	1/1:4,24:26:48.16:1254,48,0	1/1:3,15:20:30.10:784,30,0	0/0:23,0:23:49.23:0,49,1149	0/0:28,0:28:72.23:0,72,1271	0/0:17,0:17:39.03:0,39,668	1/1:6,22:28:48.16:1254,48,0	1/1:5,28:34:87.28:2066,87,0	1/1:0,10:10:24.08:627,24,0	1/1:1,18:19:45.15:1178,45,0
chr10	45022731	.	T	TTG	774.24	PASS	AB=0.971;AC=29;AF=0.580;AN=50;BaseQRankSum=-1.200;DP=574;FS=2.827;HRun=0;HaplotypeScore=116.5823;InbreedingCoeff=0.1596;MQ=69.05;MQ0=19;MQRankSum=0.021;QD=1.80;ReadPosRankSum=0.775;VQSLOD=2.3942;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:21:0.47:1,0,0	./.	0/1:34,0:21:0:0,0,0	./.	1/1:12,0:12:6.02:82,6,0	1/1:18,2:18:14.67:168,15,0	0/1:19,4:22:26.12:38,0,26	./.	0/1:19,0:19:18.64:24,0,19	0/1:24,0:20:1.15:25,0,1	0/1:19,0:17:5.78:20,0,6	0/1:28,0:26:0.42:0,0,46	0/1:18,0:16:0.95:29,0,1	1/1:10,0:10:3.01:33,3,0	0/1:22,0:22:0.02:0,0,0	0/0:22,0:21:2.87:0,3,19	0/1:28,0:25:10.95:11,0,47	0/0:5,0:5:2.74:0,3,12	1/1:13,0:12:2.90:16,3,0	1/1:25,0:24:12.36:87,12,0	1/1:43,0:40:2.68:11,3,0	0/0:15,0:14:8.98:0,9,85	0/1:8,1:9:0.14:36,0,0	0/0:23,0:21:5.23:0,5,39	0/1:18,0:17:1.93:11,0,2	1/1:14,0:12:13.91:92,14,0	1/1:26,0:24:26.21:219,26,0	0/0:6,0:6:1.55:0,2,4
chr10	45022771	.	G	GTC	1177.45	PASS	AB=0.991;AC=23;AF=0.442;AN=52;BaseQRankSum=4.511;DP=521;FS=7.652;HRun=0;HaplotypeScore=141.6778;InbreedingCoeff=0.2492;MQ=39.39;MQ0=37;MQRankSum=-1.228;QD=3.49;ReadPosRankSum=1.397;VQSLOD=1.9525;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:17,0:14:10.97:11,0,12	0/0:4,0:4:2.98:0,3,21	./.	./.	1/1:19,0:18:8.78:71,9,0	0/1:23,0:20:35.83:36,0,122	0/0:24,0:22:5.92:0,6,161	0/0:22,0:13:34.07:0,34,214	0/1:16,0:15:0.10:0,0,65	0/1:25,0:22:8.10:138,0,8	1/1:17,0:14:7.93:92,8,0	0/0:22,0:19:31.69:0,32,263	0/0:29,0:26:53.80:0,54,381	1/1:18,0:18:2.74:12,3,0	0/1:26,0:26:9.97:29,0,10	0/1:29,0:27:33.90:74,0,34	0/0:21,0:19:13.14:0,13,122	0/0:8,0:8:6.40:0,6,27	0/1:11,1:11:0.39:93,0,0	1/1:21,1:21:5.73:143,6,0	1/1:31,2:24:9.78:56,10,0	0/0:19,0:16:9.03:0,9,134	0/1:10,0:8:6.91:7,0,44	0/0:29,0:27:6.02:0,6,77	0/1:21,0:19:2.60:39,0,3	1/1:22,1:22:16.05:216,16,0	1/1:23,3:24:13.10:323,13,0	0/0:5,0:4:0.06:0,0,19
chr10	45022775	.	GTGTC	G	2717.48	PASS	AB=0.895;AC=43;AF=0.827;AN=52;BaseQRankSum=2.677;DP=504;FS=1.410;HRun=0;HaplotypeScore=142.5419;InbreedingCoeff=-0.0685;MQ=39.51;MQ0=36;MQRankSum=0.905;QD=5.66;ReadPosRankSum=0.596;VQSLOD=2.7894;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:13:6.32:35,6,0	1/1:5,0:5:2.97:20,3,0	./.	./.	1/1:20,0:19:8.33:104,8,0	0/1:24,0:21:17.21:17,0,218	0/1:23,0:21:30.93:31,0,113	0/0:23,0:15:32.73:0,33,239	0/1:4,11:14:10.72:104,0,11	1/1:24,1:21:15.77:207,16,0	1/1:15,0:13:8.84:69,9,0	1/1:19,0:16:3.53:129,4,0	1/1:25,3:25:52.85:507,53,0	1/1:1,16:17:3.01:56,3,0	1/1:26,0:26:5.95:47,6,0	1/1:27,0:25:2.78:86,3,0	0/1:18,0:16:23.03:23,0,30	1/1:7,0:7:2.67:11,3,0	1/1:11,1:11:0.13:110,0,0	1/1:19,1:19:14.99:165,15,0	1/1:32,0:24:5.51:36,6,0	0/1:11,9:17:30.40:30,0,31	0/1:9,0:7:0.14:52,0,0	1/1:6,23:27:5.95:75,6,0	1/1:20,1:19:1.40:79,1,0	1/1:18,4:21:46.24:404,46,0	1/1:21,4:24:36.50:441,36,0	0/1:5,0:4:12.80:13,0,31
chr10	45022777	.	GTC	G	2356.42	PASS	AB=1.000;AC=42;AF=0.778;AN=54;BaseQRankSum=5.113;DP=496;FS=5.567;HRun=0;HaplotypeScore=126.1155;InbreedingCoeff=0.4354;MQ=39.32;MQ0=35;MQRankSum=-0.369;QD=5.88;ReadPosRankSum=2.818;VQSLOD=2.7851;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:13:8.46:45,8,0	1/1:5,0:5:2.97:20,3,0	0/0:1,0:1:2.98:0,3,21	./.	1/1:20,0:19:8.62:69,9,0	0/0:25,0:22:18.52:0,19,267	0/0:23,0:21:3.54:0,4,152	0/0:26,0:16:35.66:0,36,266	0/1:14,0:13:10.94:40,0,11	1/1:24,0:20:39.07:268,39,0	1/1:14,1:13:14.97:121,15,0	1/1:17,2:16:9.34:150,9,0	1/1:27,0:24:51.31:381,51,0	1/1:17,0:17:2.99:24,3,0	1/1:2,23:25:5.98:47,6,0	1/1:22,3:24:20.58:154,21,0	0/1:19,0:17:19.58:22,0,20	1/1:1,5:6:3.01:44,3,0	1/1:12,0:11:14.74:119,15,0	1/1:20,0:19:14.03:132,14,0	1/1:13,18:23:5.51:37,6,0	0/0:18,0:15:0.07:0,0,59	1/1:7,0:5:5.96:53,6,0	1/1:29,0:27:4.55:29,5,0	1/1:15,5:18:17.54:143,18,0	1/1:22,0:21:46.40:307,46,0	1/1:23,0:21:17.78:283,18,0	1/1:5,0:4:4.51:23,5,0
chr10	45022779	.	C	CTG	2777.23	PASS	AB=1.000;AC=33;AF=0.611;AN=54;BaseQRankSum=6.222;DP=510;FS=4.257;HRun=0;HaplotypeScore=140.9052;InbreedingCoeff=0.6065;MQ=39.29;MQ0=34;MQRankSum=-4.069;QD=8.07;ReadPosRankSum=0.464;VQSLOD=3.4058;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:17,2:16:8.51:80,9,0	0/0:6,0:6:0.47:0,0,1	0/0:2,0:2:5.98:0,6,49	./.	1/1:18,2:19:7.45:79,7,0	0/1:23,0:20:4.17:4,0,275	0/0:23,0:21:21.69:0,22,237	0/0:27,0:17:47.88:0,48,539	0/0:15,0:14:7.79:0,8,31	1/1:26,0:24:58.20:571,58,0	1/1:16,0:14:9.65:104,10,0	0/1:19,0:16:7.45:7,0,29	0/0:27,0:24:7.62:0,8,41	0/0:17,0:17:1.25:0,1,3	1/1:26,0:26:6.49:98,6,0	1/1:27,0:26:23.15:271,23,0	1/1:17,0:15:5.82:47,6,0	1/1:7,0:7:5.99:63,6,0	1/1:12,0:11:20.26:220,20,0	1/1:6,14:19:8.93:96,9,0	1/1:31,0:23:5.97:60,6,0	0/0:17,0:15:9.73:0,10,81	0/1:8,0:6:0:0,0,0	0/0:30,0:28:5.70:0,6,31	1/1:20,0:18:17.67:206,18,0	1/1:23,1:23:42.50:518,42,0	1/1:19,4:21:39.64:450,40,0	1/1:4,2:5:3.25:73,3,0
chr10	45022781	.	GTGTC	G	1606.10	PASS	AB=0.993;AC=32;AF=0.571;AN=56;BaseQRankSum=5.264;DP=512;FS=7.767;HRun=0;HaplotypeScore=150.0899;InbreedingCoeff=0.2229;MQ=39.13;MQ0=33;MQRankSum=-3.526;QD=4.06;ReadPosRankSum=0.455;VQSLOD=2.2320;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:16:5.85:48,6,0	0/0:5,1:6:1.03:0,1,4	0/0:4,0:4:12.04:0,12,212	0/0:4,0:2:3.01:0,3,41	1/1:21,0:20:6.76:62,7,0	0/0:23,0:20:8.50:0,8,601	0/0:27,0:25:19.10:0,19,388	0/0:26,0:17:45.90:0,46,796	0/1:15,0:14:0.65:14,0,1	1/1:24,0:22:35.18:245,35,0	1/1:16,1:15:10.50:88,10,0	0/0:18,1:16:3.06:0,3,85	0/1:27,0:24:13.37:13,0,194	0/1:18,0:18:13.61:14,0,35	1/1:27,1:28:6.02:67,6,0	1/1:28,0:27:1.81:110,2,0	1/1:14,1:13:11.31:96,11,0	0/0:7,0:7:1.66:0,2,11	0/1:12,0:11:10.88:117,0,11	1/1:18,0:17:9.02:118,9,0	1/1:28,1:21:5.69:45,6,0	0/1:15,1:14:45.80:46,0,66	1/1:7,0:5:2.90:16,3,0	0/1:30,0:28:12.50:12,0,32	0/1:20,0:18:16.36:72,0,16	1/1:24,0:23:42.57:307,43,0	1/1:21,1:20:26.52:279,27,0	0/1:6,0:5:9.99:10,0,33
chr10	45022791	.	CTG	C	311.28	PASS	AB=0.966;AC=25;AF=0.446;AN=56;BaseQRankSum=5.016;DP=508;FS=10.113;HRun=0;HaplotypeScore=160.7460;InbreedingCoeff=0.4113;MQ=40.24;MQ0=30;MQRankSum=-3.325;QD=1.17;ReadPosRankSum=2.590;VQSLOD=2.1655;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:15,1:14:3.15:13,3,0	0/0:6,0:6:2.41:0,2,12	0/0:6,0:6:18.06:0,18,293	0/0:8,1:5:9.03:0,9,155	1/1:18,1:18:2.30:9,2,0	0/0:27,0:24:46.40:0,46,730	0/0:25,0:23:18.64:0,19,315	0/0:30,0:22:49:0,49,754	0/0:17,0:16:11.67:0,12,101	0/1:20,0:18:23.74:25,0,24	1/1:15,1:13:7.85:35,8,0	0/0:19,0:16:23.70:0,24,328	0/0:27,0:24:54.60:0,55,703	0/0:17,0:17:8.99:0,9,98	1/1:26,1:27:5.85:33,6,0	1/1:26,1:26:5.06:39,5,0	1/1:5,11:14:5.26:70,5,0	0/1:6,0:6:4.87:21,0,5	0/1:10,0:10:1.79:16,0,2	1/1:15,0:14:5.84:43,6,0	1/1:22,0:15:2.60:11,3,0	0/0:17,0:15:11.28:0,11,162	0/0:11,0:9:15.01:0,15,165	0/0:31,0:30:8.78:0,9,118	1/1:20,1:19:2.63:11,3,0	0/1:21,1:21:17.33:66,0,17	1/1:21,1:21:0.60:64,1,0	0/1:6,1:6:25.23:27,0,25
chr10	45024380	.	CTCTT	C	1796.47	PASS	AB=1.000;AC=14;AF=0.250;AN=56;BaseQRankSum=1.267;DP=507;FS=3.835;HRun=0;HaplotypeScore=88.2795;InbreedingCoeff=0.6364;MQ=70.54;MQ0=6;MQRankSum=0.271;QD=12.56;ReadPosRankSum=0.279;VQSLOD=2.9523;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:52.44:0,52,451	0/0:6,0:5:11.94:0,12,94	0/0:24,0:8:11.18:0,11,139	0/0:34,0:20:32.48:0,32,360	1/1:17,0:17:34.72:285,35,0	0/0:30,0:29:72.80:0,73,800	0/0:21,0:21:50.93:0,51,516	0/0:26,0:26:69.71:0,70,598	0/0:11,0:11:29.93:0,30,407	0/0:17,0:17:45.43:0,45,417	0/0:20,0:20:38.86:0,39,432	0/0:8,4:12:21.01:0,21,190	0/0:15,0:14:1.79:0,2,232	0/0:19,0:19:16.13:0,16,363	0/0:20,0:20:25.48:0,25,710	0/0:10,0:10:15.36:0,15,145	0/0:33,0:33:20.99:0,21,491	0/0:14,0:13:27.79:0,28,478	1/1:14,0:14:33.51:263,34,0	0/1:14,0:14:2.16:155,0,2	0/1:15,0:15:3.50:212,0,4	0/1:6,0:6:25.27:25,0,90	0/0:13,0:13:28.72:0,29,252	0/1:24,0:24:55.07:55,0,216	0/0:21,0:21:57.03:0,57,557	1/1:16,0:16:20.09:337,20,0	1/1:19,0:19:9.68:263,10,0	1/1:18,0:18:33.97:382,34,0
chr10	45024384	.	TTC	T	526.21	PASS	AB=0.958;AC=21;AF=0.420;AN=50;BaseQRankSum=5.224;DP=533;FS=38.112;HRun=0;HaplotypeScore=78.6275;InbreedingCoeff=0.0508;MQ=64.87;MQ0=12;MQRankSum=3.205;QD=1.92;ReadPosRankSum=5.978;VQSLOD=-0.1767;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:2.25:0,2,11	0/0:7,0:5:6:0,6,60	./.	./.	0/0:17,0:17:2.99:0,3,24	0/0:31,0:29:14.52:0,15,165	0/1:17,2:19:52.43:52,0,58	0/0:27,0:26:5.68:0,6,22	0/1:12,0:12:21.10:21,0,38	1/1:16,0:16:2.98:24,3,0	0/1:20,0:20:1.82:37,0,2	0/0:13,0:13:5.98:0,6,47	0/1:13,0:14:14.25:19,0,14	0/1:19,0:22:15.18:19,0,15	0/1:17,0:17:43.65:44,0,199	1/1:10,4:13:5.84:41,6,0	1/1:24,12:36:24.95:269,25,0	0/0:15,0:14:15.03:0,15,195	0/1:15,0:15:8.35:8,0,43	0/0:15,0:15:0:0,0,0	0/0:20,0:19:6.46:0,6,51	1/1:5,0:7:2.84:14,3,0	1/1:13,0:14:2.50:9,2,0	1/1:18,0:26:12.70:67,13,0	./.	0/1:18,0:18:33.66:35,0,34	0/1:20,0:20:14.66:15,0,18	0/0:20,0:20:3.88:0,4,26
chr10	45024635	.	TG	T	6417.91	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=10.054;DP=636;FS=27.873;HRun=1;HaplotypeScore=60.0542;InbreedingCoeff=0.9993;MQ=62.79;MQ0=1;MQRankSum=2.515;QD=39.13;ReadPosRankSum=3.403;VQSLOD=2.8634;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:75.23:0,75,1168	0/0:9,0:9:27.09:0,27,431	0/0:21,0:10:27.08:0,27,410	0/0:27,0:18:54.17:0,54,823	0/0:21,0:21:60.20:0,60,959	0/0:21,0:20:57.18:0,57,870	0/0:27,0:27:75.22:0,75,1146	0/0:28,0:26:78.27:0,78,1246	1/1:0,26:26:75.25:1049,75,0	0/0:26,0:26:75.25:0,75,1178	0/0:23,0:23:69.20:0,69,1053	1/1:0,24:24:63.21:881,63,0	1/1:0,28:28:78.26:1091,78,0	1/1:0,23:23:66.22:923,66,0	0/0:25,0:25:72.23:0,72,1125	0/0:24,0:24:72.23:0,72,1127	0/0:26,0:25:75.20:0,75,1122	0/0:18,0:17:48.16:0,48,766	0/0:20,0:20:60.20:0,60,937	0/0:25,0:25:75.26:0,75,1196	0/0:19,0:19:57.18:0,57,883	1/1:0,23:23:66.22:923,66,0	1/1:0,21:21:60.20:839,60,0	1/1:0,19:19:51.17:713,51,0	0/0:23,0:23:69.21:0,69,1046	0/0:24,0:24:72.23:0,72,1126	0/0:31,0:31:93.25:0,93,1451	0/0:8,0:8:24.08:0,24,383
chr10	45024885	.	CTA	C	3706.04	PASS	AC=8;AF=0.148;AN=54;BaseQRankSum=11.617;DP=761;FS=5.381;HRun=0;HaplotypeScore=83.1705;InbreedingCoeff=0.9699;MQ=57.87;MQ0=27;MQRankSum=2.112;QD=39.43;ReadPosRankSum=-2.025;VQSLOD=4.7938;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:56:99:0,159,2950	1/1:0,9:9:27.09:413,27,0	0/0:27,0:3:6.02:0,6,113	./.	0/0:25,0:25:66.23:0,66,1273	1/1:0,25:24:66.22:1009,66,0	1/1:1,23:23:51.14:771,51,0	1/1:3,33:35:99:1512,102,0	0/0:20,0:20:60.21:0,60,1158	0/0:26,0:26:78.27:0,78,1505	0/0:20,0:20:60.19:0,60,1115	0/0:33,0:33:99:0,99,1858	0/0:20,0:20:60.12:0,60,988	0/0:31,0:31:87.27:0,87,1596	0/0:34,0:34:99:0,102,1910	0/0:23,0:23:66.19:0,66,1198	0/0:29,0:29:81.28:0,81,1552	0/0:24,0:24:72.19:0,72,1350	0/0:19,0:19:57.19:0,57,1066	0/0:36,0:36:99:0,105,1888	0/0:53,0:53:99:0,151,2859	0/0:24,0:24:72.25:0,72,1389	0/0:20,0:20:57.20:0,57,1100	0/0:33,0:32:96.33:0,96,1852	0/0:22,0:22:66.23:0,66,1255	0/0:32,0:32:93.31:0,93,1765	0/0:20,0:20:60.15:0,60,1055	0/0:7,0:7:21.07:0,21,387
chr10	45026371	.	C	CA	3509.29	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-9.454;DP=772;FS=12.217;HRun=2;HaplotypeScore=107.1279;InbreedingCoeff=0.9997;MQ=87.58;MQ0=0;MQRankSum=-0.620;QD=37.73;ReadPosRankSum=-2.283;VQSLOD=1.5756;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,108,1338	1/1:0,16:16:42.14:605,42,0	0/0:29,0:29:81.21:0,81,975	0/0:33,0:33:84.23:0,84,993	0/0:28,0:28:78.24:0,78,965	1/1:2,26:28:75.25:1080,75,0	1/1:2,11:13:27.09:389,27,0	1/1:1,35:36:99:1436,105,0	0/0:30,0:30:90.28:0,90,1113	0/0:36,0:36:99:0,99,1214	0/0:27,0:27:72.19:0,72,864	0/0:22,0:22:66.19:0,66,804	0/0:24,0:24:72.23:0,72,890	0/0:22,0:22:66.21:0,66,816	0/0:31,0:31:90.27:0,90,1102	0/0:28,0:28:78.23:0,78,954	0/0:27,0:27:78.24:0,78,964	0/0:17,0:17:51.16:0,51,631	0/0:26,0:26:72.21:0,72,878	0/0:28,0:28:78.23:0,78,952	0/0:52,0:52:99:0,147,1822	0/0:23,0:23:63.20:0,63,781	0/0:23,0:23:69.19:0,69,837	0/0:24,0:24:69.22:0,69,855	0/0:24,0:24:60.17:0,60,730	0/0:41,0:41:99:0,117,1426	0/0:32,0:32:90.28:0,90,1116	0/0:15,0:15:36.08:0,36,420
chr10	45026676	.	CAAAAA	C	1816.25	PASS	AB=0.686;AC=16;AF=0.286;AN=56;BaseQRankSum=6.996;DP=518;FS=6.455;HRun=18;HaplotypeScore=108.3562;InbreedingCoeff=0.5948;MQ=74.46;MQ0=3;MQRankSum=-1.798;QD=10.50;ReadPosRankSum=8.138;VQSLOD=-0.7146;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:11,0:30:39.59:40,0,101	1/1:5,0:11:3.33:32,3,0	0/0:27,0:14:5.29:0,5,220	0/0:15,0:14:7.51:0,8,88	1/1:10,9:19:4.24:124,4,0	0/0:7,0:16:27.49:0,27,140	0/0:5,0:12:20.14:0,20,233	0/0:24,0:32:51.12:0,51,504	0/0:18,0:19:27.09:0,27,512	0/0:12,0:17:39.05:0,39,494	0/0:16,0:28:65.31:0,65,968	0/0:11,0:11:24.08:0,24,476	0/0:18,0:20:38.70:0,39,558	0/0:15,0:18:33.11:0,33,602	0/0:21,0:26:57.18:0,57,973	0/0:21,0:21:45.14:0,45,843	0/1:9,0:13:11.83:12,0,81	0/0:19,0:19:39.11:0,39,796	0/1:7,7:15:7.40:225,0,7	1/1:3,11:15:32.29:444,32,0	0/1:9,5:15:5.16:144,0,5	0/0:13,0:15:36.10:0,36,521	0/0:17,0:20:35.85:0,36,474	0/0:12,0:13:18.20:0,18,321	0/0:11,0:15:30.09:0,30,466	1/1:11,11:23:35.65:497,36,0	1/1:9,8:21:13.12:299,13,0	1/1:7,4:11:13.94:182,14,0
chr10	45028324	.	G	GTGGA	721.22	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-2.190;DP=754;FS=2.273;HRun=0;HaplotypeScore=132.7810;InbreedingCoeff=0.9531;MQ=55.40;MQ0=12;MQRankSum=-1.254;QD=16.03;ReadPosRankSum=-2.050;VQSLOD=3.0780;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:41:75.03:0,75,987	0/0:17,0:16:39.08:0,39,549	0/0:23,0:14:12.03:0,12,149	0/0:28,1:17:30.05:0,30,328	0/0:28,0:28:57.12:0,57,845	1/1:5,13:16:15.05:333,15,0	1/1:11,14:27:21.07:505,21,0	0/0:34,0:31:30.85:0,31,383	0/0:27,0:28:66.03:0,66,892	0/0:31,0:30:66.16:0,66,913	0/0:9,0:9:12.04:0,12,200	0/0:24,0:23:57.07:0,57,768	0/0:25,0:25:47.55:0,48,880	0/0:41,0:41:99:0,105,1456	0/0:23,0:23:47.65:0,48,746	0/0:28,0:28:60.18:0,60,959	0/0:29,0:29:58.55:0,59,895	0/0:32,0:30:40.87:0,41,805	0/0:14,0:10:18.03:0,18,271	0/0:21,0:21:32.99:0,33,432	0/0:61,0:53:99:0,105,1478	0/0:26,0:25:45.04:0,45,624	0/0:17,0:16:24.06:0,24,370	0/0:48,0:47:99:0,102,1625	0/0:19,0:19:54.04:0,54,717	0/0:22,0:20:48.01:0,48,664	0/0:24,0:24:60.12:0,60,908	0/0:11,0:11:33.11:0,33,549
chr10	45028375	.	AGATG	A	2846.16	PASS	AB=0.969;AC=26;AF=0.520;AN=50;BaseQRankSum=-7.276;DP=783;FS=4.774;HRun=0;HaplotypeScore=151.2528;InbreedingCoeff=0.6400;MQ=52.61;MQ0=31;MQRankSum=1.429;QD=7.35;ReadPosRankSum=-0.243;VQSLOD=2.6537;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:37,0:35:5.70:60,6,0	0/0:13,0:13:0:0,0,0	./.	./.	0/0:24,0:24:2.99:0,3,24	0/0:25,0:25:19.36:0,19,138	0/0:44,0:40:1.75:0,2,22	./.	1/1:29,1:28:21.04:258,21,0	1/1:31,0:31:5.69:50,6,0	1/1:7,2:9:16.20:204,16,0	1/1:22,2:22:24.01:302,24,0	1/1:33,2:32:27.05:343,27,0	0/1:42,3:45:0.07:412,0,0	1/1:16,2:17:12.03:147,12,0	1/1:25,5:30:30.07:389,30,0	0/0:32,0:33:16.11:0,16,146	1/1:24,2:22:12.04:172,12,0	0/0:14,0:13:2.88:0,3,15	0/0:20,0:20:9.01:0,9,110	0/0:66,0:57:12.33:0,12,74	1/1:16,3:18:9.03:135,9,0	1/1:11,1:12:6.01:71,6,0	1/1:30,8:38:36.01:468,36,0	0/1:33,0:30:10.14:10,0,92	0/0:25,0:24:10.27:0,10,100	0/0:19,0:19:5.88:0,6,63	0/0:17,0:14:5.64:0,6,21
chr10	45028445	.	ATGGG	A	2436.19	PASS	AB=0.937;AC=18;AF=0.346;AN=52;BaseQRankSum=-0.217;DP=1232;FS=8.853;HRun=0;HaplotypeScore=176.9771;InbreedingCoeff=-0.4114;MQ=30.22;MQ0=338;MQRankSum=-0.793;QD=2.63;ReadPosRankSum=1.343;VQSLOD=2.1796;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:65,0:41:46.30:0,46,630	0/0:18,0:9:7.08:0,7,34	./.	./.	0/0:32,0:20:6.02:0,6,130	1/1:36,0:22:5.95:118,6,0	0/1:69,0:33:7.17:7,0,193	0/0:39,0:19:30.89:0,31,214	0/1:41,27:45:99:305,0,113	0/1:40,3:14:99:266,0,121	0/0:9,6:11:5.96:0,6,45	0/1:56,5:30:99:418,0,104	0/1:23,19:30:99:132,0,133	0/1:51,3:40:99:512,0,171	0/1:50,0:24:30.08:30,0,84	0/1:48,8:40:99:311,0,176	0/1:59,0:39:9.98:10,0,394	0/1:51,1:19:93.47:135,0,93	0/0:24,0:12:16.80:0,17,201	0/0:29,0:18:21.77:0,22,189	0/1:138,0:77:13.26:13,0,652	0/1:32,1:20:34.67:35,0,99	0/0:18,8:17:5.49:0,5,38	0/1:61,3:40:99:158,0,198	0/1:35,0:19:77.98:78,0,99	0/0:56,0:23:11.24:0,11,624	0/1:34,0:13:15.99:16,0,119	0/1:34,0:16:42.94:43,0,130
chr10	45028461	.	A	ATGGA	4220.57	PASS	AB=1.000;AC=26;AF=0.500;AN=52;BaseQRankSum=-1.783;DP=1226;FS=7.546;HRun=0;HaplotypeScore=165.8756;InbreedingCoeff=0.3719;MQ=32.55;MQ0=327;MQRankSum=-1.634;QD=5.44;ReadPosRankSum=0.522;VQSLOD=3.4706;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:66,0:43:35.37:0,35,435	0/0:18,0:10:2.33:0,2,11	./.	./.	0/0:32,0:21:5.82:0,6,94	1/1:33,0:22:2.76:35,3,0	0/1:60,0:30:4.12:58,0,4	0/0:50,0:20:0.45:0,0,1	1/1:65,0:44:27.04:514,27,0	0/1:48,0:25:44.57:397,0,45	0/1:15,0:12:0:0,0,0	1/1:61,0:30:45.06:707,45,0	0/1:39,0:27:2.94:245,0,3	1/1:47,0:33:45.61:857,46,0	1/1:43,11:29:2.81:53,3,0	1/1:52,0:36:32.32:526,32,0	0/1:60,0:41:31.89:32,0,53	0/1:56,0:23:10.39:252,0,10	0/0:23,0:11:5.93:0,6,40	0/0:29,0:18:11.48:0,11,110	0/0:139,0:80:36.14:0,36,508	1/1:31,0:20:1.81:65,2,0	0/1:25,0:17:0:0,0,0	1/1:65,0:41:9.10:305,9,0	1/1:30,0:18:14.75:173,15,0	0/0:57,0:28:20.19:0,20,399	0/0:36,0:15:5.74:0,6,71	0/1:32,0:15:1:1,0,42
chr10	45028595	.	ATGGG	A	341.88	PASS	AB=0.995;AC=13;AF=0.232;AN=56;BaseQRankSum=6.213;DP=968;FS=10.487;HRun=0;HaplotypeScore=199.5711;InbreedingCoeff=-0.1388;MQ=53.18;MQ0=34;MQRankSum=-0.951;QD=0.92;ReadPosRankSum=-5.206;VQSLOD=-0.1332;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:46,0:43:49.02:49,0,775	1/1:1,8:9:3.01:54,3,0	0/1:34,0:8:6.47:6,0,90	0/0:25,0:12:29.84:0,30,245	0/1:16,0:16:11.11:11,0,156	0/0:33,0:30:62.90:0,63,586	0/0:60,0:55:51.30:0,51,612	0/0:40,0:25:64.88:0,65,521	0/1:45,0:43:15.09:15,0,657	0/0:45,0:42:95.83:0,96,1267	0/0:28,0:28:64.37:0,64,852	0/0:51,0:47:65.77:0,66,1109	0/0:49,0:49:44.32:0,44,700	0/0:42,0:41:99:0,99,1052	0/1:42,0:41:50.87:51,0,814	0/0:47,0:47:54.38:0,54,830	0/1:38,0:37:2.95:3,0,836	0/0:31,0:31:55.40:0,55,577	0/1:19,0:14:5.17:5,0,224	0/0:23,0:22:1.91:0,2,312	0/1:67,0:61:99:135,0,693	0/0:33,0:31:28.38:0,28,475	0/0:23,0:21:23.65:0,24,213	0/0:33,0:33:70.75:0,71,867	0/1:23,0:23:3.41:3,0,419	0/0:35,0:34:3.53:0,4,674	0/1:17,1:17:99:127,0,129	0/1:13,0:12:22.82:23,0,144
chr10	45028599	.	G	GTGGA	7800.47	PASS	AB=0.948;AC=33;AF=0.635;AN=52;BaseQRankSum=-7.342;DP=996;FS=0.536;HRun=0;HaplotypeScore=192.2379;InbreedingCoeff=0.1817;MQ=51.79;MQ0=49;MQRankSum=-0.057;QD=10.35;ReadPosRankSum=-4.383;VQSLOD=3.5342;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:40,6:42:45.03:791,45,0	1/1:9,0:9:3.01:34,3,0	./.	./.	0/0:11,0:18:5.97:0,6,45	1/1:33,1:31:12.04:181,12,0	0/1:55,0:50:28.35:89,0,28	0/1:47,0:25:13.98:29,0,14	1/1:43,0:41:48.07:765,48,0	0/0:47,0:41:23.92:0,24,258	0/0:28,0:28:26.35:0,26,291	1/1:51,0:47:39.15:932,39,0	1/1:50,0:50:9.06:622,9,0	1/1:41,0:40:48.12:807,48,0	0/1:38,5:42:23.24:676,0,23	0/1:25,24:51:14.21:719,0,14	0/1:36,1:36:99:227,0,119	1/1:28,3:30:27.08:513,27,0	0/0:18,0:15:7.24:0,7,55	1/1:25,0:25:9.40:71,9,0	0/0:61,0:67:12.77:0,13,269	0/1:35,0:33:19.91:145,0,20	0/1:23,0:21:24.97:48,0,25	1/1:34,0:33:36.11:624,36,0	1/1:21,2:23:10.97:406,11,0	0/1:39,0:36:60.63:61,0,132	0/1:14,0:17:7.10:7,0,98	1/1:13,0:13:8.46:53,8,0
chr10	45028618	.	G	GATGA	8954.88	PASS	AB=0.882;AC=21;AF=0.375;AN=56;BaseQRankSum=-1.764;DP=1025;FS=0.627;HRun=0;HaplotypeScore=187.3976;InbreedingCoeff=0.1303;MQ=48.37;MQ0=88;MQRankSum=2.893;QD=15.13;ReadPosRankSum=7.970;VQSLOD=3.8942;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:41,0:35:99:359,0,289	0/1:10,0:10:2.27:2,0,46	1/1:19,0:2:1.25:3,1,0	0/0:17,0:2:5.99:0,6,66	0/0:21,0:19:26.85:0,27,235	0/1:32,0:29:37.55:38,0,288	0/0:59,0:54:46.86:0,47,734	0/0:48,0:15:41.93:0,42,373	1/1:41,6:44:72.55:1480,73,0	0/0:53,0:44:99:0,117,1232	0/0:28,0:28:62.66:0,63,725	1/1:51,7:52:99:1880,131,0	0/1:9,44:55:31.18:845,0,31	1/1:36,8:42:99:1591,104,0	0/1:42,0:41:99:302,0,396	0/1:49,0:48:99:418,0,276	0/1:45,0:44:23.14:23,0,767	0/1:29,0:28:99:232,0,249	0/0:29,0:15:26.74:0,27,239	0/0:28,0:26:49.69:0,50,376	0/0:76,0:67:99:0,127,1154	0/1:10,19:29:63.03:266,0,63	0/1:5,17:20:45.51:92,0,46	1/1:35,5:38:44.77:1223,45,0	0/1:24,0:24:99:201,0,184	0/0:45,0:39:99:0,103,962	0/0:19,0:17:37.01:0,37,340	0/0:9,0:8:13.27:0,13,99
chr10	45028680	.	GTGGA	G	4038.17	PASS	AB=0.967;AC=19;AF=0.380;AN=50;BaseQRankSum=-4.627;DP=852;FS=2.164;HRun=0;HaplotypeScore=176.4265;InbreedingCoeff=0.6103;MQ=54.53;MQ0=27;MQRankSum=1.659;QD=10.71;ReadPosRankSum=1.835;VQSLOD=3.4226;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:34:63.64:64,0,273	1/1:7,0:7:9.01:118,9,0	./.	./.	0/0:12,0:10:6.02:0,6,101	0/0:26,0:26:21.07:0,21,371	0/0:44,0:39:35.21:0,35,466	0/0:28,0:25:5.94:0,6,45	1/1:27,29:53:63.21:984,63,0	0/1:26,0:34:19.33:19,0,350	./.	1/1:28,28:51:39.13:591,39,0	1/1:19,9:27:32.93:490,33,0	1/1:15,23:37:39.13:610,39,0	0/0:23,0:42:36.09:0,36,578	0/1:38,0:42:99:133,0,494	0/0:25,0:33:7.65:0,8,519	0/0:20,0:33:30.05:0,30,516	0/0:19,0:15:9.56:0,10,153	0/0:22,0:22:8.40:0,8,179	0/0:65,0:60:38.10:0,38,531	1/1:17,2:18:3.06:236,3,0	1/1:8,1:9:11.22:89,11,0	1/1:19,25:42:45.15:704,45,0	0/0:11,0:20:6.88:0,7,126	0/0:26,0:25:33.06:0,33,580	0/0:15,0:14:8.37:0,8,100	0/0:8,0:9:11.85:0,12,161
chr10	45028720	.	A	ATGGG	3537.09	PASS	AB=0.936;AC=13;AF=0.232;AN=56;BaseQRankSum=-4.225;DP=925;FS=7.376;HRun=0;HaplotypeScore=175.7851;InbreedingCoeff=0.2892;MQ=51.08;MQ0=51;MQRankSum=0.436;QD=9.94;ReadPosRankSum=2.163;VQSLOD=2.6828;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:46:99:0,101,863	1/1:15,0:15:31.71:258,32,0	0/0:15,0:5:15.01:0,15,154	0/0:27,0:12:32.56:0,33,249	0/0:23,0:21:35.39:0,35,291	0/1:5,22:26:44.86:368,0,45	1/1:40,4:41:75.94:1030,76,0	1/1:38,0:19:22.33:295,22,0	0/0:42,0:40:56.23:0,56,766	0/1:39,0:32:99:106,0,492	0/0:6,0:6:17.76:0,18,130	0/0:52,0:47:81.91:0,82,744	0/0:37,0:36:88.24:0,88,779	0/0:39,0:39:83.30:0,83,791	0/1:50,0:46:99:274,0,450	0/1:37,0:39:99:536,0,324	0/1:32,0:31:99:335,0,263	0/1:34,0:33:99:265,0,361	0/0:29,0:22:23.79:0,24,297	0/0:28,0:28:10.74:0,11,322	0/0:70,0:63:99:0,119,1108	0/0:27,0:26:24.89:0,25,296	0/0:17,0:16:29.75:0,30,224	0/0:42,0:41:75.10:0,75,727	0/1:34,0:31:69.73:70,0,363	0/0:34,0:33:59.97:0,60,806	0/0:17,0:14:28.50:0,28,248	0/0:13,0:13:23.98:0,24,244
chr10	45028851	.	CGGGT	C	40.57	PASS	AB=1.000;AC=4;AF=0.071;AN=56;BaseQRankSum=2.643;DP=817;FS=20.696;HRun=0;HaplotypeScore=151.1771;InbreedingCoeff=0.3027;MQ=55.92;MQ0=1;MQRankSum=-3.970;QD=1.27;ReadPosRankSum=-1.764;VQSLOD=1.2483;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,114,2955	1/1:2,0:2:3.01:37,3,0	0/0:28,0:20:45.47:0,45,1215	0/0:35,0:25:47:0,47,1165	0/0:25,0:25:69.14:0,69,1530	0/0:4,7:10:9.02:0,9,174	0/1:14,0:13:32.80:33,0,102	0/1:16,0:14:73.34:73,0,99	0/0:35,0:35:99:0,99,2541	0/0:44,0:44:99:0,129,3217	0/0:15,0:15:39.13:0,39,1066	0/0:39,0:39:99:0,111,2814	0/0:36,0:36:99:0,105,2670	0/0:48,0:48:99:0,141,3508	0/0:36,0:35:99:0,102,2491	0/0:36,0:36:96.29:0,96,2481	0/0:33,0:33:73.26:0,73,2138	0/0:23,0:23:63.20:0,63,1628	0/0:30,0:27:69.01:0,69,1670	0/0:22,0:22:57.17:0,57,1532	0/0:80,0:77:99:0,176,4667	0/0:24,0:24:69.01:0,69,1586	0/0:24,0:24:66.21:0,66,1616	0/0:37,0:37:95.88:0,96,2454	0/0:24,0:24:57.18:0,57,1412	0/0:26,0:26:78.16:0,78,1969	0/0:22,0:22:66.21:0,66,1670	0/0:5,0:5:15.05:0,15,411
chr10	45029001	.	C	CGGAT	6738.96	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-11.359;DP=860;FS=1.341;HRun=0;HaplotypeScore=150.6647;InbreedingCoeff=0.9968;MQ=59.28;MQ0=4;MQRankSum=0.211;QD=36.23;ReadPosRankSum=3.190;VQSLOD=4.9939;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:87.27:0,87,1425	0/0:9,0:9:18.03:0,18,250	0/0:31,0:17:21.02:0,21,280	0/0:38,0:26:42.49:0,42,615	0/0:26,0:26:60.19:0,60,976	0/0:19,0:19:33.11:0,33,561	0/0:30,0:29:75.13:0,75,1175	0/0:33,0:33:65.86:0,66,993	0/0:34,0:34:80.83:0,81,1231	1/1:12,25:40:78.17:1722,78,0	1/1:5,14:21:24.97:598,25,0	0/0:38,0:37:92.89:0,93,1517	0/0:31,0:31:72.15:0,72,1130	0/0:42,0:42:99:0,99,1600	1/1:6,30:36:54.18:1331,54,0	1/1:5,19:26:39.13:954,39,0	0/0:26,0:26:69.21:0,69,1137	1/1:7,32:40:37.69:1478,38,0	0/0:27,0:27:41.41:0,41,627	0/0:31,0:31:60.20:0,60,976	0/0:66,0:64:90.69:0,91,1650	0/0:27,0:27:48.15:0,48,786	0/0:20,0:19:48.14:0,48,755	0/0:38,0:38:93.16:0,93,1477	1/1:8,14:23:27.09:656,27,0	0/0:36,0:36:87.24:0,87,1355	0/0:16,0:16:33.11:0,33,558	0/0:17,0:17:42.12:0,42,675
chr10	45029180	.	AC	A	4058.02	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=11.060;DP=682;FS=3.254;HRun=5;HaplotypeScore=68.0979;InbreedingCoeff=0.9998;MQ=89.06;MQ0=0;MQRankSum=-1.913;QD=31.46;ReadPosRankSum=2.620;VQSLOD=4.5021;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:84.26:0,84,1131	0/0:13,0:13:36.12:0,36,492	0/0:26,0:26:72.19:0,72,934	0/0:26,0:26:69.02:0,69,906	0/0:24,0:24:66.09:0,66,900	0/0:23,0:23:66.22:0,66,902	0/0:22,0:22:60.16:0,60,774	0/0:42,0:42:99:0,120,1579	0/0:27,0:27:81.26:0,81,1088	1/1:1,20:21:60.13:659,60,0	1/1:2,11:13:36.10:405,36,0	0/0:33,0:33:93.27:0,93,1251	0/0:23,0:23:66.20:0,66,882	0/0:25,0:25:66.22:0,66,902	1/1:1,29:30:87.25:987,87,0	1/1:1,24:25:69.20:783,69,0	0/0:32,0:32:87.23:0,87,1153	1/1:1,23:24:63.18:715,63,0	0/0:23,0:23:60.16:0,60,800	0/0:28,0:28:81.24:0,81,1073	0/0:49,0:49:99:0,138,1870	0/0:15,0:15:39.11:0,39,506	0/0:19,0:19:57.19:0,57,779	0/0:24,0:24:57.17:0,57,759	1/1:1,15:16:45.13:510,45,0	0/0:23,0:23:66.21:0,66,886	0/0:15,0:15:36.12:0,36,492	0/0:10,0:10:30.09:0,30,390
chr10	45029346	.	G	GA	1879.03	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-9.513;DP=791;FS=0.450;HRun=10;HaplotypeScore=87.2063;InbreedingCoeff=0.8964;MQ=75.14;MQ0=1;MQRankSum=-0.277;QD=20.88;ReadPosRankSum=-2.028;VQSLOD=3.4763;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:49:89.18:0,89,868	1/1:4,9:13:2.42:231,2,0	0/0:22,0:22:35.05:0,35,255	0/0:19,0:20:6.33:0,6,159	0/0:27,2:29:45.80:0,46,567	1/1:6,17:23:42.11:448,42,0	1/1:6,22:28:43.34:652,43,0	1/1:4,22:26:67.40:699,67,0	0/0:27,0:27:59.92:0,60,492	0/0:34,0:35:58.89:0,59,474	0/0:18,0:18:38.94:0,39,320	0/0:33,0:33:74.89:0,75,616	0/0:32,0:32:83.88:0,84,689	0/0:27,0:27:59.88:0,60,492	0/0:28,0:28:62.87:0,63,513	0/0:34,0:34:86.85:0,87,714	0/0:29,0:29:86.89:0,87,712	0/0:26,0:26:56.18:0,56,449	0/0:22,1:24:21:0,21,368	0/0:33,1:34:42.88:0,43,558	0/0:28,2:29:7.64:0,8,478	0/0:26,0:27:61.89:0,62,489	0/0:23,0:23:56.06:0,56,456	0/0:56,1:58:99:0,132,1273	0/0:23,0:24:50.84:0,51,411	0/0:27,0:27:62.86:0,63,513	0/0:28,0:29:67.91:0,68,547	0/0:14,0:14:32.79:0,33,271
chr10	45030562	.	A	AAGT	207.47	PASS	AB=0.932;AC=10;AF=0.179;AN=56;BaseQRankSum=10.746;DP=691;FS=24.002;HRun=0;HaplotypeScore=151.3479;InbreedingCoeff=-0.0138;MQ=60.27;MQ0=17;MQRankSum=-2.620;QD=1.09;ReadPosRankSum=-4.941;VQSLOD=-0.7623;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:51:38.85:0,39,697	0/0:8,0:10:24.08:0,24,306	0/0:32,0:22:55.69:0,56,718	0/0:35,0:15:41.93:0,42,452	0/0:21,0:27:26.13:0,26,400	0/0:21,0:28:41.97:0,42,578	0/1:29,0:29:10.30:10,0,520	0/0:26,0:25:3.63:0,4,626	0/0:18,0:23:51.08:0,51,644	0/1:21,0:23:88.12:88,0,423	0/1:6,0:5:15.93:16,0,68	0/0:14,0:15:35.49:0,35,566	0/0:19,0:19:54.18:0,54,784	0/0:18,0:19:54.16:0,54,783	0/0:22,0:32:47.86:0,48,601	0/1:17,0:22:8.76:9,0,221	0/0:24,0:31:80.99:0,81,1111	0/0:17,0:25:1.73:0,2,380	0/0:11,0:14:23.93:0,24,373	0/1:12,0:12:27.40:45,0,27	0/1:46,0:50:28.18:28,0,931	0/0:14,0:14:36.10:0,36,482	0/0:16,0:15:38.80:0,39,585	0/0:39,0:40:87.65:0,88,1561	0/1:16,0:16:47.07:47,0,108	0/1:23,0:23:43.86:44,0,349	0/0:13,3:36:14.42:0,14,277	1/1:6,0:6:10.14:65,10,0
chr10	45030839	.	CAAAGA	C	4035.89	PASS	AB=1.000;AC=24;AF=0.429;AN=56;BaseQRankSum=7.175;DP=554;FS=7.116;HRun=0;HaplotypeScore=118.1533;InbreedingCoeff=0.5345;MQ=73.05;MQ0=7;MQRankSum=-1.282;QD=15.70;ReadPosRankSum=-3.431;VQSLOD=1.8781;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:30:49.30:0,49,675	0/1:9,0:9:12.97:13,0,55	0/0:19,0:13:7.83:0,8,71	0/0:35,0:14:1.76:0,2,10	1/1:3,28:31:56.50:786,57,0	1/1:15,2:17:41.42:321,41,0	0/1:15,0:15:5.63:71,0,6	1/1:21,0:20:32.83:262,33,0	0/1:14,0:14:71.91:72,0,171	0/0:21,0:21:39.03:0,39,585	0/0:11,0:11:24.04:0,24,489	0/1:18,0:18:10.97:11,0,94	0/0:23,0:22:29.99:0,30,266	0/0:22,0:22:3.38:0,3,213	0/0:18,0:18:36.06:0,36,519	0/0:20,0:20:51.10:0,51,875	0/0:31,0:31:50.77:0,51,555	0/0:25,0:25:29:0,29,713	1/1:14,0:13:14.98:241,15,0	1/1:12,1:13:24:318,24,0	1/1:11,0:10:14.96:214,15,0	0/1:12,0:12:9.24:9,0,186	0/0:21,0:21:39.55:0,40,702	0/1:21,0:20:14.78:15,0,148	0/0:19,0:19:48.04:0,48,772	1/1:18,1:19:45.02:593,45,0	1/1:28,3:32:59.94:671,60,0	1/1:10,0:10:27.06:439,27,0
chr10	45030874	.	AG	A	552.57	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=5.826;DP=534;FS=2.340;HRun=1;HaplotypeScore=114.6553;InbreedingCoeff=0.8058;MQ=53.33;MQ0=14;MQRankSum=-4.963;QD=12.01;ReadPosRankSum=-0.040;VQSLOD=2.1669;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:21:50.11:0,50,786	1/1:5,0:5:4.28:15,4,0	0/1:13,0:2:4:4,0,42	0/0:35,0:6:11.98:0,12,140	0/0:39,0:39:98.25:0,98,1092	1/1:2,9:11:33.10:398,33,0	1/1:1,7:8:19.74:158,20,0	1/1:5,4:4:9.03:125,9,0	0/0:17,0:17:30.85:0,31,522	0/0:16,0:16:46.97:0,47,723	0/0:9,0:9:27.07:0,27,401	0/0:17,0:17:7:0,7,140	0/0:17,0:16:24.02:0,24,382	0/0:27,0:27:31.43:0,31,468	0/0:20,0:20:52.24:0,52,751	0/0:21,0:21:60.18:0,60,905	0/0:30,1:30:60.12:0,60,711	0/0:27,0:26:44.39:0,44,711	0/0:12,0:9:23.97:0,24,279	0/0:13,0:13:35.88:0,36,432	0/0:11,0:10:11.15:0,11,148	0/0:16,0:16:44.99:0,45,619	0/0:17,0:17:39.11:0,39,599	0/0:33,0:30:43.18:0,43,661	0/0:23,0:23:62.22:0,62,918	0/0:22,0:22:66.03:0,66,894	0/0:27,0:27:71.52:0,72,938	0/0:14,0:13:38.67:0,39,402
chr10	45030879	.	AG	A	433.15	PASS	AC=6;AF=0.111;AN=54;BaseQRankSum=6.349;DP=542;FS=2.561;HRun=1;HaplotypeScore=119.7630;InbreedingCoeff=0.9176;MQ=49.70;MQ0=16;MQRankSum=-4.194;QD=21.66;ReadPosRankSum=1.313;VQSLOD=3.8919;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:19:43.03:0,43,670	1/1:0,4:4:12.03:143,12,0	0/0:20,0:5:9.03:0,9,143	0/0:48,1:6:15.04:0,15,211	0/0:39,0:39:89.45:0,89,1062	1/1:0,9:9:26.97:253,27,0	1/1:0,7:7:19.95:174,20,0	./.	0/0:18,0:18:32.14:0,32,504	0/0:16,0:16:45.11:0,45,689	0/0:8,0:8:24.08:0,24,377	0/0:18,0:18:7:0,7,140	0/0:18,0:17:27:0,27,385	0/0:26,0:26:28.47:0,28,437	0/0:19,0:19:51.15:0,51,738	0/0:19,0:19:54.17:0,54,838	0/0:32,0:31:63.83:0,64,805	0/0:25,0:24:38.32:0,38,629	0/0:14,0:11:29.99:0,30,357	0/0:14,0:14:38.90:0,39,483	0/0:10,1:10:11.15:0,11,149	0/0:16,0:16:42:0,42,617	0/0:18,0:18:39.13:0,39,620	0/0:32,0:29:37.16:0,37,582	0/0:22,0:22:60.20:0,60,945	0/0:23,0:23:69.03:0,69,916	0/0:26,0:26:74.53:0,75,969	0/0:14,0:13:38.67:0,39,414
chr10	45030884	.	AG	A	287.09	PASS	AB=0.680;AC=5;AF=0.089;AN=56;BaseQRankSum=6.457;DP=574;FS=4.893;HRun=1;HaplotypeScore=129.2873;InbreedingCoeff=0.6926;MQ=47.85;MQ0=17;MQRankSum=-4.397;QD=10.63;ReadPosRankSum=0.606;VQSLOD=1.7196;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:21:47.82:0,48,702	1/1:0,4:4:12.03:133,12,0	0/0:38,0:5:9.03:0,9,143	0/0:55,0:9:6.04:0,6,224	0/0:40,0:40:92.46:0,92,1099	0/1:9,8:17:0.30:165,0,0	1/1:1,5:6:13.66:110,14,0	0/0:4,2:2:1.56:0,2,15	0/0:17,0:17:30.98:0,31,521	0/0:14,0:14:40.95:0,41,626	0/0:8,0:8:23.11:0,23,335	0/0:17,0:17:3.99:0,4,92	0/0:17,0:16:23.99:0,24,357	0/0:26,0:26:25.83:0,26,422	0/0:17,0:17:45.14:0,45,670	0/0:19,0:19:52.22:0,52,751	0/0:33,0:32:67.08:0,67,1002	0/0:25,0:24:37.87:0,38,640	0/0:16,0:13:36.01:0,36,466	0/0:14,0:14:41.91:0,42,543	0/0:11,1:11:7.24:0,7,142	0/0:16,0:16:38.98:0,39,549	0/0:19,0:19:42.13:0,42,647	0/0:33,0:30:40.16:0,40,608	0/0:20,0:20:54.17:0,54,835	0/0:22,0:22:63.02:0,63,846	0/0:24,0:24:68.49:0,68,865	0/0:15,0:14:38.67:0,39,414
chr10	45030889	.	AG	A	193.74	PASS	AB=0.846;AC=6;AF=0.107;AN=56;BaseQRankSum=5.938;DP=587;FS=4.787;HRun=1;HaplotypeScore=135.8106;InbreedingCoeff=0.4840;MQ=46.50;MQ0=19;MQRankSum=-3.223;QD=2.23;ReadPosRankSum=0.283;VQSLOD=-0.6145;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:22:51.16:0,51,787	1/1:0,4:4:12.01:120,12,0	0/0:48,0:7:15.05:0,15,216	0/1:58,0:9:3.50:3,0,251	0/0:38,0:38:98.48:0,98,1185	0/1:10,8:18:38.83:123,0,39	1/1:2,5:7:3.36:62,3,0	0/0:5,2:3:5.72:0,6,29	0/0:17,0:17:22.67:0,23,457	0/0:12,0:12:36.12:0,36,560	0/0:8,0:8:24.08:0,24,377	0/0:17,0:17:3.99:0,4,92	0/0:18,0:17:24:0,24,354	0/0:25,0:25:22.46:0,22,349	0/0:14,0:14:36.12:0,36,550	0/0:18,0:18:50.20:0,50,755	0/0:33,0:32:66.70:0,67,990	0/0:25,0:24:30.89:0,31,623	0/0:16,0:14:42.03:0,42,526	0/0:16,0:16:38.90:0,39,503	0/0:11,1:11:7.17:0,7,114	0/0:15,0:15:35.97:0,36,500	0/0:20,0:20:38.88:0,39,621	0/0:33,0:30:37.16:0,37,572	0/0:20,0:20:53.19:0,53,792	0/0:25,0:25:69.04:0,69,912	0/0:23,0:23:62.36:0,62,761	0/0:15,0:14:41.68:0,42,456
chr10	45030900	.	G	GAGA	3228.29	PASS	AB=0.929;AC=29;AF=0.518;AN=56;BaseQRankSum=-0.984;DP=617;FS=10.533;HRun=0;HaplotypeScore=150.7855;InbreedingCoeff=-0.0304;MQ=45.42;MQ0=22;MQRankSum=5.023;QD=7.63;ReadPosRankSum=-1.279;VQSLOD=2.3088;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:13,10:21:99:234,0,317	1/1:4,0:4:12:109,12,0	0/0:60,0:7:20.83:0,21,173	0/0:67,0:10:7.02:0,7,109	0/1:40,0:40:99:127,0,449	0/1:14,0:14:27.39:27,0,127	0/1:10,0:9:33.52:52,0,34	0/0:8,0:4:8.88:0,9,71	1/1:10,0:14:35.58:340,36,0	0/1:6,0:12:17.05:17,0,244	0/0:5,0:11:6.58:0,7,292	1/1:0,15:17:6:97,6,0	1/1:3,15:17:12.04:283,12,0	1/1:0,21:23:15.04:310,15,0	0/1:5,0:17:1.63:2,0,102	0/1:9,0:17:2.33:2,0,374	0/0:34,0:33:33.25:0,33,808	0/1:13,16:29:99:178,0,286	0/0:11,0:14:6.71:0,7,353	0/1:15,0:18:5.47:5,0,369	0/1:4,0:10:3.26:63,0,3	1/1:0,15:15:30.06:599,30,0	0/1:6,16:22:99:196,0,287	1/1:6,27:32:36.44:675,36,0	0/1:9,0:20:6.31:6,0,354	0/1:21,0:26:36.01:36,0,557	0/1:15,0:19:31.65:32,0,366	0/1:10,0:16:13.50:14,0,235
chr10	45030905	.	G	GA	565.52	PASS	AB=0.935;AC=10;AF=0.179;AN=56;BaseQRankSum=5.078;DP=616;FS=2.576;HRun=1;HaplotypeScore=145.7734;InbreedingCoeff=0.2474;MQ=45.25;MQ0=22;MQRankSum=-5.730;QD=4.71;ReadPosRankSum=-3.195;VQSLOD=-0.6883;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:19,2:19:49.12:49,0,70	0/0:4,0:4:11.37:0,11,94	0/0:61,0:7:14.17:0,14,179	0/0:69,0:10:21.88:0,22,215	0/0:38,0:38:53.93:0,54,770	0/1:12,0:12:6.19:253,0,6	1/1:7,0:6:0.91:60,1,0	1/1:9,0:5:12:112,12,0	0/0:13,0:13:33.53:0,34,334	0/1:12,0:12:2.23:2,0,188	0/0:11,0:11:27.20:0,27,251	0/0:13,0:13:5.77:0,6,33	0/0:19,0:18:16.79:0,17,83	0/0:26,0:26:10.20:0,10,60	0/1:13,4:17:10.09:158,0,10	0/0:19,0:19:35.85:0,36,304	0/1:27,4:30:63.49:63,0,543	0/0:29,0:28:14.81:0,15,231	0/0:14,0:14:25.17:0,25,313	0/0:17,0:18:19.32:0,19,281	0/1:11,0:9:1.17:1,0,76	0/0:17,0:17:30.96:0,31,163	0/0:23,0:23:33.31:0,33,308	0/0:31,0:28:16.16:0,16,165	0/0:23,0:23:39.05:0,39,362	0/0:27,0:27:43.43:0,43,507	0/0:22,0:22:24.16:0,24,355	0/0:17,0:19:26.15:0,26,352
chr10	45030906	.	AG	A	264.39	PASS	AB=0.957;AC=7;AF=0.125;AN=56;BaseQRankSum=4.669;DP=612;FS=3.580;HRun=1;HaplotypeScore=146.1536;InbreedingCoeff=0.6942;MQ=45.13;MQ0=21;MQRankSum=-3.494;QD=5.29;ReadPosRankSum=-1.593;VQSLOD=-0.0053;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:21,1:20:43.64:44,0,323	0/0:4,0:4:10.36:0,10,44	0/0:61,0:7:21.06:0,21,309	0/0:68,1:10:21.95:0,22,319	0/0:38,0:38:98.53:0,99,1096	1/1:12,0:12:22.96:243,23,0	1/1:7,0:6:13.78:76,14,0	1/1:9,0:5:8.74:42,9,0	0/0:13,0:13:38.93:0,39,486	0/0:12,0:12:36.06:0,36,429	0/0:11,0:11:32.84:0,33,419	0/0:12,0:12:6:0,6,66	0/0:19,0:19:23.98:0,24,317	0/0:26,0:26:26.99:0,27,317	0/0:18,0:18:23.07:0,23,302	0/0:18,0:18:48.13:0,48,622	0/0:28,2:29:7.16:0,7,675	0/0:28,0:27:30.65:0,31,518	0/0:14,0:14:40.68:0,41,533	0/0:17,0:17:50.08:0,50,505	0/0:11,0:9:1.92:0,2,72	0/0:17,0:17:32.30:0,32,410	0/0:22,0:22:33.42:0,33,512	0/0:33,0:28:43.18:0,43,556	0/0:22,0:22:60.17:0,60,773	0/0:26,0:26:70.10:0,70,718	0/0:22,0:22:54:0,54,611	0/0:18,1:19:24.47:0,24,474
chr10	45030907	.	GA	G	255.35	PASS	AB=0.765;AC=5;AF=0.089;AN=56;BaseQRankSum=5.489;DP=619;FS=3.442;HRun=3;HaplotypeScore=151.6308;InbreedingCoeff=0.3089;MQ=44.72;MQ0=21;MQRankSum=-3.118;QD=4.64;ReadPosRankSum=-1.501;VQSLOD=-0.2116;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:20:8.63:9,0,320	0/0:4,0:4:11.89:0,12,110	0/0:62,0:7:20.96:0,21,271	0/0:69,0:10:18.94:0,19,270	0/0:37,0:37:99:0,99,1121	0/1:3,9:12:14.21:232,0,14	1/1:5,3:7:16.45:104,16,0	0/1:8,5:5:16.09:29,0,16	0/0:13,0:13:39.11:0,39,505	0/0:13,0:13:36.05:0,36,374	0/0:11,0:11:33.09:0,33,413	0/0:12,0:12:6.02:0,6,72	0/0:18,0:18:24.08:0,24,332	0/0:26,0:26:30.08:0,30,378	0/0:18,0:18:21.36:0,21,279	0/0:17,0:17:45.11:0,45,550	0/0:30,0:29:44.19:0,44,692	0/0:31,0:30:38.82:0,39,530	0/0:14,0:14:40.66:0,41,478	0/0:17,0:17:50.70:0,51,486	0/0:12,0:10:3.71:0,4,92	0/0:17,0:17:36.06:0,36,463	0/0:22,0:22:33.40:0,33,456	0/0:32,0:27:42.40:0,42,542	0/0:22,0:22:60.12:0,60,714	0/0:26,0:26:69.73:0,70,667	0/0:22,0:22:53.86:0,54,565	0/0:19,0:19:45.36:0,45,472
chr10	45030912	.	AAAG	A	543.23	PASS	AB=0.867;AC=7;AF=0.125;AN=56;BaseQRankSum=6.224;DP=616;FS=0.000;HRun=0;HaplotypeScore=160.9449;InbreedingCoeff=0.1169;MQ=45.33;MQ0=18;MQRankSum=-3.475;QD=3.67;ReadPosRankSum=1.654;VQSLOD=2.1152;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:21,0:19:18.46:18,0,436	0/0:4,0:4:9:0,9,84	0/1:64,0:9:2.82:3,0,206	0/0:72,0:10:21.03:0,21,236	0/0:35,0:35:79.24:0,79,708	0/1:4,9:14:44.24:375,0,44	0/1:4,3:7:22.23:168,0,22	1/1:5,5:7:5.37:88,5,0	0/0:13,0:13:39.13:0,39,703	0/0:11,0:11:33.11:0,33,557	0/0:12,0:12:36.12:0,36,598	0/0:10,0:10:6.02:0,6,116	0/0:17,0:17:24.01:0,24,528	0/0:24,0:24:30.10:0,30,624	0/0:18,0:18:41.97:0,42,656	0/0:17,0:17:42.14:0,42,777	0/0:28,0:29:42.04:0,42,1114	0/0:31,0:30:49.71:0,50,905	0/0:15,0:14:41.68:0,42,405	0/0:17,0:17:36.28:0,36,299	0/0:10,0:9:5.86:0,6,92	0/0:17,0:17:36.12:0,36,752	0/0:20,0:20:29.79:0,30,565	0/0:30,0:26:40.95:0,41,826	0/0:21,0:21:57.19:0,57,1039	0/1:26,0:26:13.27:13,0,292	0/0:24,0:24:49.84:0,50,495	0/0:21,0:21:34.64:0,35,375
chr10	45030939	.	GAGAC	G	4826.93	PASS	AB=0.943;AC=21;AF=0.375;AN=56;BaseQRankSum=8.858;DP=565;FS=2.212;HRun=0;HaplotypeScore=151.9921;InbreedingCoeff=0.2866;MQ=51.86;MQ0=6;MQRankSum=-7.311;QD=18.57;ReadPosRankSum=0.336;VQSLOD=4.6610;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:24:29.27:29,0,687	1/1:4,0:4:2.71:6,3,0	0/0:36,0:15:35.53:0,36,457	0/0:27,0:8:13.74:0,14,251	1/1:5,15:20:54.05:873,54,0	0/1:17,0:17:67.40:67,0,85	0/1:11,0:10:31.97:32,0,36	0/0:31,0:23:31.82:0,32,594	0/1:15,0:15:42.97:43,0,287	0/0:16,0:16:11.21:0,11,803	0/0:17,0:17:41.44:0,41,755	0/0:11,0:11:20.86:0,21,311	0/0:19,0:19:37.38:0,37,723	0/0:20,0:20:38.75:0,39,649	0/0:26,0:26:34.89:0,35,936	0/1:18,0:18:1.54:2,0,749	0/0:25,0:25:2.65:0,3,789	0/0:34,0:33:43.95:0,44,1078	0/1:4,9:12:45.55:444,0,46	1/1:3,14:17:42.14:734,42,0	0/1:8,1:8:53.78:95,0,54	0/1:19,0:19:10.28:10,0,373	0/0:22,0:22:6.35:0,6,635	0/1:30,0:26:2.96:3,0,559	0/0:21,0:21:8.67:0,9,1034	1/1:0,26:26:75.20:1275,75,0	1/1:0,21:21:35.93:667,36,0	1/1:2,13:15:33.11:546,33,0
chr10	45032541	.	G	GCACGCACA	3877.06	PASS	AC=30;AF=0.556;AN=54;BaseQRankSum=-2.476;DP=573;FS=3.121;HRun=0;HaplotypeScore=148.9618;InbreedingCoeff=0.7818;MQ=55.40;MQ0=6;MQRankSum=-3.915;QD=12.92;ReadPosRankSum=-2.178;VQSLOD=2.5846;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:32.87:0,33,498	0/0:12,0:12:12:0,12,224	0/0:21,0:9:5.70:0,6,29	./.	1/1:21,0:21:11.99:116,12,0	0/0:23,0:23:45.07:0,45,837	0/0:29,0:29:23.99:0,24,391	0/0:20,0:20:14.91:0,15,116	1/1:4,15:24:15.04:611,15,0	0/0:8,0:23:26.98:0,27,433	0/0:5,0:18:4.62:0,5,63	1/1:1,16:19:12.04:489,12,0	1/1:5,10:18:9.03:346,9,0	1/1:10,11:25:8.70:362,9,0	0/0:5,0:13:6.91:0,7,113	0/0:3,0:14:19.42:0,19,334	1/1:33,0:33:35.84:381,36,0	0/0:10,0:28:6.02:0,6,112	1/1:16,0:16:18.79:164,19,0	1/1:8,0:8:3:25,3,0	1/1:35,0:34:12.43:99,12,0	1/1:1,9:10:3.01:122,3,0	1/1:6,5:11:6.02:244,6,0	1/1:17,16:36:6.02:245,6,0	0/0:10,0:23:15.77:0,16,239	1/1:22,0:22:41.75:400,42,0	1/1:5,0:14:3.01:104,3,0	1/1:8,0:8:9.03:169,9,0
chr10	45032862	.	A	AT	2529.02	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-10.707;DP=614;FS=5.084;HRun=6;HaplotypeScore=63.3111;InbreedingCoeff=0.9842;MQ=89.72;MQ0=0;MQRankSum=-1.332;QD=30.47;ReadPosRankSum=-2.373;VQSLOD=3.4532;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,108,1092	1/1:1,5:6:18.06:225,18,0	0/0:25,0:25:54.04:0,54,526	0/0:31,0:30:62.01:0,62,579	0/0:11,0:11:33.07:0,33,336	1/1:1,25:26:69.22:868,69,0	1/1:2,19:21:51.16:642,51,0	1/1:4,26:30:78.22:954,78,0	0/0:20,0:20:60.14:0,60,612	0/0:21,0:21:60.13:0,60,608	0/0:16,0:16:33.53:0,34,330	0/0:21,0:21:60.14:0,60,612	0/0:28,0:28:75.14:0,75,757	0/0:33,0:33:93.17:0,93,933	0/0:25,0:25:69.15:0,69,698	0/0:28,0:28:84.19:0,84,857	0/0:31,0:30:87.20:0,87,887	0/0:14,0:14:42.03:0,42,409	0/0:35,0:35:96.19:0,96,964	0/0:4,0:4:12.03:0,12,122	0/0:42,0:42:99:0,111,1115	0/0:15,0:15:39.07:0,39,391	0/0:11,0:11:27.05:0,27,268	0/0:27,0:27:72.16:0,72,734	0/0:12,0:12:30.06:0,30,306	0/0:22,0:22:63.14:0,63,643	0/0:12,0:12:33.08:0,33,337	0/0:6,0:6:15.03:0,15,153
chr10	45033109	.	TACCCCC	T	2167.42	PASS	AC=12;AF=0.222;AN=54;BaseQRankSum=6.214;DP=188;FS=14.885;HRun=0;HaplotypeScore=47.0154;InbreedingCoeff=0.7812;MQ=78.11;MQ0=0;MQRankSum=-8.310;QD=37.37;ReadPosRankSum=3.581;VQSLOD=1.6104;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:5:12.04:0,12,404	0/0:1,0:1:3.01:0,3,101	0/0:12,0:11:12.15:0,12,486	0/0:7,0:7:10.66:0,11,138	0/0:6,0:6:15.05:0,15,501	0/0:3,0:3:6.02:0,6,202	0/0:12,0:12:24.08:0,24,809	0/0:10,0:10:24.08:0,24,740	0/0:5,0:5:15.05:0,15,506	1/1:5,7:12:24.08:520,24,0	1/1:2,8:10:15.05:325,15,0	0/0:2,0:2:3.01:0,3,68	0/0:4,0:4:12.04:0,12,404	0/0:4,0:4:6.02:0,6,168	1/1:1,12:13:30.10:650,30,0	1/1:2,5:7:8.82:195,9,0	0/0:8,0:8:24.08:0,24,805	1/1:2,4:6:9.03:195,9,0	0/0:9,0:9:9.03:0,9,303	0/0:5,0:5:9.03:0,9,303	0/0:9,0:9:21.07:0,21,687	0/0:5,0:5:9.03:0,9,242	0/0:7,0:7:12.03:0,12,301	0/0:4,0:4:9.03:0,9,303	1/1:2,8:10:21.07:455,21,0	0/0:8,0:8:24.08:0,24,806	0/0:4,0:4:12.04:0,12,403	./.
chr10	45034061	.	A	AC	1380.05	PASS	AB=0.796;AC=16;AF=0.286;AN=56;BaseQRankSum=-2.047;DP=465;FS=15.758;HRun=9;HaplotypeScore=66.1618;InbreedingCoeff=0.7428;MQ=73.46;MQ0=0;MQRankSum=-3.122;QD=11.04;ReadPosRankSum=-0.332;VQSLOD=1.0056;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:59.97:0,60,521	1/1:0,0:3:2.84:14,3,0	0/1:14,1:15:31.96:32,0,177	0/0:16,0:16:36.91:0,37,297	0/0:14,0:14:35.99:0,36,310	0/0:19,1:20:18.26:0,18,385	0/0:18,0:18:47.96:0,48,411	0/0:20,0:20:12.93:0,13,281	0/0:12,0:12:23.03:0,23,188	1/1:7,5:12:9.02:100,9,0	1/1:10,10:20:24.06:266,24,0	0/0:15,0:15:38.99:0,39,338	0/0:20,0:21:56.01:0,56,473	0/0:18,0:18:50.97:0,51,437	1/1:1,15:16:30.08:332,30,0	1/1:3,7:10:12.03:133,12,0	0/1:8,9:17:47.38:130,0,47	1/1:2,18:20:36.10:398,36,0	0/0:21,0:21:53.85:0,54,458	0/0:26,0:26:66.90:0,67,595	0/0:10,0:10:23.97:0,24,204	0/0:21,0:22:56.01:0,56,474	0/0:15,1:16:10.13:0,10,211	0/0:13,1:14:5.81:0,6,279	1/1:4,8:12:15.04:166,15,0	0/0:19,0:19:50.99:0,51,443	0/0:29,0:28:77.96:0,78,673	0/0:7,0:7:21:0,21,182
chr10	45034309	.	AC	A	6549.22	PASS	AB=0.824;AC=38;AF=0.679;AN=56;BaseQRankSum=-2.779;DP=474;FS=1.687;HRun=10;HaplotypeScore=57.6430;InbreedingCoeff=0.6434;MQ=78.18;MQ0=0;MQRankSum=-2.683;QD=17.23;ReadPosRankSum=2.970;VQSLOD=5.3708;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,2:23:16.06:0,16,405	0/0:4,0:6:6.91:0,7,54	0/0:13,0:13:2.11:0,2,185	0/0:13,0:13:7.86:0,8,122	1/1:3,22:25:62.98:547,63,0	0/1:6,11:17:3.19:204,0,3	1/1:2,15:17:44.99:391,45,0	1/1:14,16:31:37.25:317,37,0	1/1:1,11:13:29.99:260,30,0	0/1:20,3:23:16.67:17,0,250	0/0:18,1:19:7.03:0,7,247	1/1:1,11:12:35.99:312,36,0	1/1:2,18:20:53.99:468,54,0	1/1:3,13:16:37.25:335,37,0	0/1:13,2:15:24.86:25,0,183	0/1:11,1:12:1.91:2,0,186	1/1:1,10:11:32.99:286,33,0	0/0:8,0:8:18.01:0,18,178	1/1:7,16:23:44.96:387,45,0	1/1:2,20:22:62.99:547,63,0	1/1:7,7:14:26.98:234,27,0	1/1:6,8:14:23.96:208,24,0	1/1:3,15:18:38.98:339,39,0	1/1:1,20:21:53.99:469,54,0	0/0:12,0:12:15.01:0,15,147	1/1:4,14:18:44.98:390,45,0	1/1:5,27:33:82.87:708,83,0	1/1:1,4:5:12:104,12,0
chr10	45040806	.	T	TGATA	8936.14	PASS	AB=0.866;AC=40;AF=0.769;AN=52;BaseQRankSum=-6.561;DP=597;FS=1.445;HRun=0;HaplotypeScore=95.1125;InbreedingCoeff=0.5595;MQ=65.33;MQ0=5;MQRankSum=0.321;QD=18.77;ReadPosRankSum=-1.336;VQSLOD=4.4664;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:33.09:0,33,479	0/1:11,0:11:12.92:164,0,13	./.	./.	1/1:20,6:32:15.05:274,15,0	0/0:7,0:16:18.02:0,18,168	0/0:9,0:14:6.01:0,6,56	0/1:38,0:36:0:0,0,0	1/1:8,13:20:27.09:628,27,0	1/1:18,9:30:36.56:688,37,0	0/1:18,10:28:6.65:754,0,7	1/1:9,11:21:24.08:552,24,0	1/1:13,3:16:9.03:193,9,0	1/1:8,5:14:9.03:209,9,0	1/1:10,7:16:15.05:346,15,0	1/1:8,12:21:21.07:489,21,0	1/1:12,8:23:15.05:349,15,0	1/1:16,1:17:15.48:243,15,0	1/1:14,6:20:18.06:417,18,0	1/1:22,3:35:21.07:369,21,0	1/1:2,15:17:30.10:698,30,0	1/1:6,6:11:9.03:209,9,0	0/0:36,0:36:51.17:0,51,748	1/1:8,5:13:3.01:70,3,0	1/1:14,13:27:39.13:904,39,0	1/1:13,6:19:21.07:486,21,0	0/1:15,9:24:30.88:264,0,31	1/1:8,11:19:27.09:628,27,0
chr10	45040854	.	A	AGATC	4760.38	PASS	AB=0.997;AC=22;AF=0.393;AN=56;BaseQRankSum=11.739;DP=588;FS=0.369;HRun=0;HaplotypeScore=105.5681;InbreedingCoeff=-0.5087;MQ=68.50;MQ0=6;MQRankSum=-0.551;QD=11.10;ReadPosRankSum=1.879;VQSLOD=4.0938;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:71.99:0,72,918	1/1:1,8:10:9.03:239,9,0	0/0:23,0:18:30.99:0,31,348	0/0:17,0:11:23.20:0,23,286	0/1:26,0:25:99:139,0,223	0/0:17,0:17:42.03:0,42,432	0/0:14,0:14:27:0,27,254	0/0:31,0:31:89.99:0,90,833	0/1:18,0:17:82.84:361,0,83	0/1:26,0:26:99:287,0,305	0/1:34,0:34:99:404,0,407	0/1:18,0:18:99:312,0,111	0/1:10,0:10:91.13:91,0,125	0/1:17,0:17:94.46:94,0,212	0/1:16,1:17:99:213,0,186	0/1:20,0:20:99:268,0,152	0/1:20,0:20:99:189,0,130	0/1:16,0:16:56.09:56,0,189	0/1:21,0:20:99:198,0,311	0/1:27,0:27:99:188,0,221	0/1:24,0:24:99:388,0,158	0/1:15,0:14:98.44:98,0,187	0/0:32,0:32:84.07:0,84,1091	0/1:9,0:9:32.86:33,0,57	0/1:23,0:23:99:514,0,145	0/1:24,0:22:99:235,0,362	0/1:25,0:25:99:125,0,320	0/1:29,0:29:99:327,0,368
chr10	45042523	.	A	ACACAGC	7643.33	PASS	AC=8;AF=0.154;AN=52;BaseQRankSum=-5.623;DP=712;FS=7.456;HRun=0;HaplotypeScore=135.3232;InbreedingCoeff=0.9913;MQ=52.95;MQ0=54;MQRankSum=-14.046;QD=71.43;ReadPosRankSum=-3.640;VQSLOD=4.4414;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:68.98:0,69,1880	1/1:2,13:16:39.13:1352,39,0	./.	./.	0/0:27,0:26:71.83:0,72,1644	1/1:10,18:28:72.25:2490,72,0	1/1:15,18:27:66.23:2281,66,0	1/1:14,12:24:54.17:1520,54,0	0/0:26,0:26:69.24:0,69,1559	0/0:25,0:23:66.23:0,66,1495	0/0:15,0:15:42.14:0,42,960	0/0:35,0:34:93.32:0,93,2105	0/0:21,0:21:48.16:0,48,1080	0/0:27,0:27:78.24:0,78,1695	0/0:27,0:27:69.22:0,69,1499	0/0:42,0:41:99:0,123,2792	0/0:28,0:27:72.23:0,72,1534	0/0:23,0:23:60.21:0,60,1342	0/0:26,0:18:51.16:0,51,1122	0/0:30,0:30:87.30:0,87,1988	0/0:29,0:29:78.27:0,78,1782	0/0:20,0:20:48.15:0,48,1031	0/0:14,0:14:42.14:0,42,927	0/0:33,0:33:87.28:0,87,1943	0/0:27,0:25:75.24:0,75,1667	0/0:24,0:21:57.20:0,57,1289	0/0:31,0:30:84.27:0,84,1871	0/0:4,0:4:12.04:0,12,274
chr10	45046653	.	C	CATAG	17137.54	PASS	AB=1.000;AC=25;AF=0.446;AN=56;BaseQRankSum=-13.781;DP=898;FS=7.522;HRun=0;HaplotypeScore=157.7993;InbreedingCoeff=0.9595;MQ=60.79;MQ0=0;MQRankSum=-2.769;QD=46.19;ReadPosRankSum=-0.539;VQSLOD=5.2102;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:93.19:0,93,1601	1/1:2,15:17:24.08:626,24,0	0/0:16,0:17:34.20:0,34,664	0/1:4,0:4:0.83:1,0,22	1/1:0,34:35:78.27:2033,78,0	1/1:6,19:25:36.12:939,36,0	1/1:5,11:16:21.07:538,21,0	1/1:9,34:40:96.23:2075,96,0	0/0:35,0:35:96.33:0,96,1737	0/0:59,0:59:99:0,160,2884	0/0:31,0:31:78.25:0,78,1387	0/0:23,0:23:69.24:0,69,1248	0/0:43,0:43:99:0,129,2307	0/0:31,0:31:93.27:0,93,1571	0/0:43,0:43:93.31:0,93,1661	0/0:44,0:44:99:0,99,1770	1/1:6,17:23:41.96:1035,42,0	0/0:29,0:29:78.16:0,78,1343	1/1:6,17:25:54.14:1091,54,0	1/1:6,49:55:99:2795,108,0	1/1:13,13:26:48.94:1183,49,0	0/0:33,0:33:90.29:0,90,1592	0/0:36,0:36:99:0,105,1880	0/0:20,0:20:56.93:0,57,995	0/0:45,0:45:99:0,129,2290	1/1:7,33:41:41.60:2140,42,0	1/1:4,29:33:57.20:1491,57,0	1/1:8,18:26:48.03:1190,48,0
chr10	45046726	.	T	TATAC	20157.65	PASS	AB=1.000;AC=36;AF=0.643;AN=56;BaseQRankSum=6.331;DP=847;FS=15.919;HRun=0;HaplotypeScore=213.9712;InbreedingCoeff=0.3615;MQ=58.95;MQ0=0;MQRankSum=0.916;QD=27.43;ReadPosRankSum=2.865;VQSLOD=3.4256;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:63.18:0,63,999	0/0:13,0:13:18.03:0,18,179	0/0:16,0:11:11.29:0,11,115	0/0:15,0:8:10.90:0,11,110	1/1:19,12:31:63.69:1411,64,0	0/0:23,0:23:29.99:0,30,288	0/0:15,0:15:21.43:0,21,181	0/1:56,0:54:99:189,0,354	0/1:42,0:42:99:493,0,367	1/1:14,31:46:84.90:1941,85,0	1/1:5,18:25:39.13:875,39,0	0/1:31,0:31:99:403,0,174	0/1:42,0:42:99:356,0,257	0/1:39,0:39:99:450,0,243	1/1:5,41:47:69.24:1650,69,0	1/1:5,38:46:48.06:1134,48,0	1/1:16,7:23:36.55:808,37,0	1/1:12,10:22:37.81:893,38,0	1/1:12,3:15:19.20:284,19,0	1/1:22,11:33:51.16:1147,51,0	1/1:13,14:27:61.58:1264,62,0	0/1:27,0:27:99:297,0,125	0/1:21,0:21:99:197,0,176	0/1:17,0:17:48.24:48,0,112	1/1:25,12:36:68.10:1273,68,0	1/1:23,18:41:63.13:1818,63,0	1/1:20,16:35:88.31:1961,88,0	1/1:21,10:31:60.12:1264,60,0
chr10	45046743	.	G	GTACA	27069.42	PASS	AB=1.000;AC=41;AF=0.732;AN=56;BaseQRankSum=-4.412;DP=811;FS=0.900;HRun=0;HaplotypeScore=196.1792;InbreedingCoeff=0.8850;MQ=58.34;MQ0=2;MQRankSum=3.943;QD=42.03;ReadPosRankSum=5.974;VQSLOD=5.1425;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:54.05:0,54,791	0/0:11,0:11:24.06:0,24,368	0/0:12,0:9:5.79:0,6,70	0/0:13,0:8:5.19:0,5,96	1/1:36,0:36:63.69:1411,64,0	0/0:23,0:23:42.03:0,42,578	0/0:17,0:17:22.95:0,23,252	0/0:60,0:57:92.61:0,93,1200	1/1:35,2:37:81.26:1854,81,0	1/1:44,0:44:93.75:1960,94,0	1/1:25,0:25:45.60:927,46,0	1/1:26,1:27:69.21:1483,69,0	1/1:38,3:41:99:1850,99,0	1/1:36,0:36:84.23:1767,84,0	1/1:40,0:40:77.67:1716,78,0	1/1:44,0:44:56.98:1195,57,0	1/1:26,0:26:46.29:883,46,0	1/1:22,0:22:42.56:919,43,0	1/1:11,0:11:19.25:292,19,0	1/1:29,0:29:53.63:1171,54,0	1/1:28,0:28:60.16:1260,60,0	1/1:25,0:25:57.14:1161,57,0	1/1:18,0:18:39.13:856,39,0	1/1:15,0:15:9.03:209,9,0	1/1:32,0:31:51.15:1131,51,0	0/1:44,0:44:2.74:1762,0,3	1/1:38,0:37:93.06:2000,93,0	1/1:26,0:24:60.13:1261,60,0
chr10	45046770	.	CATAG	C	8709.53	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=0.204;DP=765;FS=5.501;HRun=0;HaplotypeScore=247.3246;InbreedingCoeff=0.9934;MQ=58.43;MQ0=2;MQRankSum=-1.243;QD=32.50;ReadPosRankSum=1.530;VQSLOD=4.3338;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:61.59:0,62,1577	1/1:1,9:10:24.08:413,24,0	0/0:18,0:16:43.97:0,44,916	0/0:10,0:8:20.84:0,21,252	0/0:32,0:32:66.23:0,66,1615	1/1:4,19:23:36.12:617,36,0	1/1:3,11:14:18.06:306,18,0	1/1:13,30:42:84.18:1237,84,0	1/1:28,4:32:72.18:1159,72,0	0/0:40,0:40:96.33:0,96,2337	0/0:25,0:25:66.20:0,66,1539	1/1:25,0:25:44.62:683,45,0	1/1:29,5:34:84.82:1292,85,0	1/1:26,7:33:81.25:1294,81,0	0/0:42,0:42:96.32:0,96,2281	0/0:38,0:38:81.15:0,81,1996	0/0:37,0:37:96.28:0,96,2358	0/0:24,0:24:54.19:0,54,1351	0/0:17,0:17:51.14:0,51,1187	0/0:34,0:34:87.30:0,87,2116	0/0:27,0:27:63.19:0,63,1489	1/1:19,3:22:48.15:771,48,0	1/1:18,1:19:48.13:745,48,0	1/1:11,2:13:12.04:193,12,0	0/0:24,0:23:54.19:0,54,1365	0/0:42,0:42:90.25:0,90,2099	0/0:38,0:38:84.29:0,84,2077	0/0:18,0:16:30.10:0,30,717
chr10	45047116	.	T	TCAAAG	4806.25	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=0.297;DP=559;FS=10.811;HRun=0;HaplotypeScore=104.0585;InbreedingCoeff=0.9929;MQ=86.11;MQ0=0;MQRankSum=-11.154;QD=78.79;ReadPosRankSum=-2.932;VQSLOD=5.7523;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,102,2155	1/1:0,6:7:18.02:494,18,0	0/0:26,0:26:70.86:0,71,1352	0/0:18,0:18:51.33:0,51,908	0/0:18,0:18:54.19:0,54,1155	1/1:4,10:15:39.09:1113,39,0	1/1:2,5:7:18.06:569,18,0	1/1:11,21:32:87.30:2630,87,0	0/0:22,0:22:63.22:0,63,1351	0/0:22,0:22:63.22:0,63,1347	0/0:19,0:19:57.13:0,57,1073	0/0:17,0:17:51.18:0,51,1107	0/0:23,0:23:63.22:0,63,1367	0/0:20,0:20:54.17:0,54,1132	0/0:14,0:14:42.14:0,42,911	0/0:18,0:18:54.19:0,54,1173	0/0:34,0:34:92.84:0,93,2008	0/0:9,0:9:27.09:0,27,567	0/0:14,0:14:42.14:0,42,910	0/0:23,0:23:60.21:0,60,1290	0/0:25,0:25:72.23:0,72,1522	0/0:21,0:21:63.22:0,63,1343	0/0:8,0:8:18.06:0,18,390	0/0:19,0:19:57.20:0,57,1208	0/0:23,0:23:69.24:0,69,1498	0/0:31,0:31:93.32:0,93,1999	0/0:23,0:23:66.23:0,66,1416	0/0:17,0:17:51.18:0,51,1108
chr10	45047390	.	G	GA	246.03	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=1.757;DP=624;FS=2.968;HRun=6;HaplotypeScore=69.1315;InbreedingCoeff=0.9966;MQ=80.85;MQ0=0;MQRankSum=-2.600;QD=24.60;ReadPosRankSum=1.238;VQSLOD=3.4872;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:54.11:0,54,544	1/1:0,10:10:27.09:340,27,0	0/0:21,0:21:44.11:0,44,424	0/0:18,0:18:26.67:0,27,225	0/0:31,0:31:87.12:0,87,857	0/0:34,0:34:99:0,99,1001	0/0:19,0:19:54.07:0,54,529	0/0:37,0:37:99:0,99,996	0/0:25,0:25:69.15:0,69,702	0/0:28,0:28:78.17:0,78,795	0/0:25,0:25:57.12:0,57,581	0/0:18,0:18:48.08:0,48,476	0/0:22,0:22:60.13:0,60,611	0/0:24,0:24:66.12:0,66,665	0/0:21,0:21:54.08:0,54,530	0/0:23,0:23:66.15:0,66,673	0/0:16,0:16:48.05:0,48,471	0/0:11,0:11:30.04:0,30,296	0/0:22,0:22:53.97:0,54,529	0/0:32,0:32:84.16:0,84,842	0/0:15,0:15:36.04:0,36,356	0/0:19,0:19:51.08:0,51,504	0/0:32,0:32:87.16:0,87,871	0/0:14,0:14:39.09:0,39,397	0/0:21,0:21:60.14:0,60,612	0/0:18,0:18:54.11:0,54,545	0/0:36,0:36:99:0,105,1035	0/0:11,0:11:30.05:0,30,299
chr10	45047686	.	GGTTTT	G	1004.94	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.632;DP=703;FS=5.488;HRun=0;HaplotypeScore=147.8997;InbreedingCoeff=0.9553;MQ=79.34;MQ0=1;MQRankSum=-1.945;QD=29.56;ReadPosRankSum=-0.002;VQSLOD=3.3631;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:12,22:34:60.16:1100,60,0	0/0:8,0:8:24.08:0,24,697	0/0:35,0:30:10.54:0,11,753	0/0:37,0:32:42.68:0,43,852	0/0:25,0:25:72.23:0,72,2033	0/0:20,0:20:45.15:0,45,1290	0/0:16,0:16:33.11:0,33,960	0/0:32,0:32:48.15:0,48,1261	0/0:30,0:30:66.22:0,66,1877	0/0:35,0:35:93.32:0,93,2604	0/0:24,0:24:63.21:0,63,1828	0/0:19,0:19:51.17:0,51,1461	0/0:22,0:22:63.22:0,63,1725	0/0:13,0:13:36.12:0,36,1005	0/0:22,0:22:51.16:0,51,1422	0/0:30,0:30:69.24:0,69,1962	0/0:28,0:28:78.22:0,78,2090	0/0:19,0:19:48.16:0,48,1315	0/0:17,0:17:39.12:0,39,986	0/0:29,0:29:81.26:0,81,2187	0/0:23,0:23:45.15:0,45,1214	0/0:25,0:25:69.22:0,69,1921	0/0:24,0:24:72.23:0,72,1976	0/0:12,0:12:24.08:0,24,656	0/0:34,0:34:87.30:0,87,2494	0/0:32,0:32:81.27:0,81,2279	0/0:39,0:38:93.30:0,93,2594	0/0:19,0:19:48.16:0,48,1397
chr10	45047735	.	C	CT	1952.07	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=2.866;DP=602;FS=2.417;HRun=5;HaplotypeScore=85.8513;InbreedingCoeff=0.9986;MQ=74.46;MQ0=0;MQRankSum=-7.639;QD=32.53;ReadPosRankSum=-2.965;VQSLOD=2.8405;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:96.24:0,96,1032	1/1:2,8:10:30.10:394,30,0	0/0:18,0:18:42.04:0,42,424	0/0:15,0:15:24.04:0,24,343	0/0:28,0:28:81.19:0,81,863	1/1:3,12:15:42.13:539,42,0	1/1:3,8:11:27.09:354,27,0	1/1:6,18:24:63.20:826,63,0	0/0:27,0:27:78.16:0,78,820	0/0:28,0:28:75.19:0,75,806	0/0:19,0:19:57.13:0,57,603	0/0:20,0:20:60.15:0,60,645	0/0:16,0:16:39.09:0,39,419	0/0:16,0:16:30.07:0,30,322	0/0:17,0:17:51.13:0,51,548	0/0:27,0:27:75.19:0,75,806	0/0:25,0:25:75.19:0,75,805	0/0:21,0:21:32.78:0,33,526	0/0:16,0:16:45.06:0,45,463	0/0:25,0:25:72.18:0,72,773	0/0:12,0:12:36.09:0,36,387	0/0:24,0:24:69.15:0,69,732	0/0:38,0:38:99:0,99,1052	0/0:12,0:12:33.08:0,33,354	0/0:29,0:29:81.20:0,81,869	0/0:28,0:28:78.18:0,78,830	0/0:32,0:32:90.09:0,90,949	0/0:13,0:13:39.10:0,39,419
chr10	45047748	.	A	AT	8397.07	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-9.637;DP=596;FS=0.662;HRun=5;HaplotypeScore=65.1172;InbreedingCoeff=0.9789;MQ=68.46;MQ0=2;MQRankSum=-3.097;QD=33.19;ReadPosRankSum=-1.818;VQSLOD=4.6576;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:96.22:0,96,1019	1/1:0,10:10:30.10:389,30,0	0/0:18,0:13:25.30:0,25,258	0/0:16,0:12:26.92:0,27,261	1/1:3,27:30:81.26:1060,81,0	1/1:2,12:14:33.11:428,33,0	1/1:3,9:12:27.09:351,27,0	1/1:10,21:31:81.18:998,81,0	0/0:25,0:25:72.18:0,72,774	0/0:26,0:26:66.16:0,66,709	0/0:18,0:18:51.07:0,51,526	0/0:22,0:22:57.14:0,57,611	0/0:14,0:14:36.09:0,36,386	0/0:14,0:14:42.11:0,42,451	0/0:15,0:15:39.09:0,39,413	0/0:23,0:23:66.17:0,66,709	1/1:1,26:27:63.20:828,63,0	0/0:26,0:26:51.32:0,51,707	1/1:2,13:15:39.13:513,39,0	1/1:2,24:26:69.22:908,69,0	1/1:0,11:11:33.11:434,33,0	0/0:21,0:21:45.11:0,45,484	0/0:33,0:33:90.18:0,90,943	0/0:10,0:10:27.07:0,27,290	0/0:27,0:27:60.70:0,61,731	1/1:3,27:30:78.25:1026,78,0	1/1:1,35:36:93.27:1205,93,0	1/1:4,7:11:4.16:256,4,0
chr10	45048113	.	A	AC	1190.43	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=0.726;DP=607;FS=16.464;HRun=3;HaplotypeScore=62.4860;InbreedingCoeff=0.9817;MQ=59.29;MQ0=6;MQRankSum=-3.302;QD=18.90;ReadPosRankSum=-0.310;VQSLOD=2.1452;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:44:99:0,120,1394	1/1:1,5:5:15.01:175,15,0	0/0:19,0:19:50.36:0,50,569	0/0:23,1:22:41.36:0,41,623	0/0:22,0:21:60.18:0,60,719	1/1:3,15:15:39.08:513,39,0	1/1:2,21:20:36.12:491,36,0	1/1:3,13:10:12.04:168,12,0	0/0:19,0:19:54.17:0,54,648	0/0:27,0:26:75.19:0,75,882	0/0:18,0:17:45.14:0,45,538	0/0:28,0:28:51.80:0,52,854	0/0:23,0:23:60.18:0,60,720	0/0:26,0:26:78.20:0,78,919	0/0:22,0:22:66.20:0,66,791	0/0:16,0:15:45.07:0,45,522	0/0:30,0:30:84.26:0,84,1007	0/0:19,0:19:54.17:0,54,646	0/0:14,0:13:36.10:0,36,420	0/0:20,0:20:54.16:0,54,647	0/0:39,0:39:99:0,102,1224	0/0:9,0:8:24.07:0,24,286	0/0:16,0:16:42.13:0,42,503	0/0:30,0:30:78.24:0,78,932	0/0:21,0:21:60.18:0,60,720	0/0:12,0:12:36.11:0,36,432	0/0:39,0:38:99:0,114,1349	0/0:5,0:5:15.05:0,15,180
chr10	45048195	.	GTATCAGGC	G	2858.27	PASS	AB=0.537;AC=7;AF=0.130;AN=54;BaseQRankSum=10.122;DP=645;FS=6.549;HRun=0;HaplotypeScore=152.1349;InbreedingCoeff=0.7736;MQ=53.65;MQ0=17;MQRankSum=-9.591;QD=38.11;ReadPosRankSum=-0.976;VQSLOD=2.6289;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,148,6566	1/1:3,10:12:27.09:790,27,0	./.	0/0:5,0:1:3.01:0,3,136	0/0:20,0:20:37.31:0,37,1565	0/1:3,19:20:90.31:1184,0,90	1/1:3,12:12:12.04:301,12,0	1/1:9,16:12:30.10:727,30,0	0/0:25,0:25:69.24:0,69,3055	0/0:31,0:28:81.28:0,81,3572	0/0:19,0:19:41.23:0,41,1841	0/0:17,0:17:51.15:0,51,2041	0/0:20,0:20:60.21:0,60,2496	0/0:22,0:22:63.22:0,63,2702	0/0:24,0:24:69.24:0,69,2950	0/0:18,0:18:51.18:0,51,2276	0/0:47,0:47:99:0,132,5867	0/0:19,0:19:54.19:0,54,2372	0/0:23,0:19:54.18:0,54,2215	0/0:26,0:26:75.26:0,75,3239	0/0:55,0:53:99:0,144,6362	0/0:14,0:13:24.08:0,24,1009	0/0:16,0:15:33.11:0,33,1494	0/0:29,0:28:77.72:0,78,3402	0/0:21,0:21:57.20:0,57,2440	0/0:30,0:30:90.31:0,90,3902	0/0:27,0:27:81.26:0,81,3188	0/0:6,0:5:15.05:0,15,679
chr10	45048343	.	C	CT	5880.32	PASS	AB=0.987;AC=39;AF=0.696;AN=56;BaseQRankSum=-8.666;DP=547;FS=11.096;HRun=9;HaplotypeScore=82.1603;InbreedingCoeff=0.5056;MQ=63.81;MQ0=3;MQRankSum=0.161;QD=14.24;ReadPosRankSum=0.046;VQSLOD=3.7337;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,102,885	1/1:4,0:4:0.78:3,1,0	0/1:21,0:12:4.90:5,0,132	0/0:22,0:15:29.83:0,30,244	0/1:20,0:20:1.61:2,0,11	0/0:18,0:17:8.84:0,9,43	0/1:16,0:16:17.34:17,0,18	1/1:29,0:25:5.14:11,5,0	1/1:3,17:20:33.09:365,33,0	1/1:4,19:23:54.10:570,54,0	1/1:2,15:17:18.98:411,19,0	1/1:2,17:19:36.10:398,36,0	1/1:4,14:18:36.10:398,36,0	1/1:5,20:25:54.15:597,54,0	1/1:3,19:23:53.98:578,54,0	1/1:1,22:23:48.13:531,48,0	0/0:21,0:19:13.49:0,13,32	1/1:4,11:15:26.29:290,26,0	0/1:19,0:17:12.98:15,0,13	1/1:11,0:11:0.52:7,1,0	1/1:9,0:9:0.53:3,1,0	1/1:2,10:12:27.07:299,27,0	1/1:4,12:16:30.08:332,30,0	1/1:2,13:14:36.10:398,36,0	1/1:8,22:30:54.15:597,54,0	0/1:26,2:28:40.06:52,0,40	0/0:20,0:19:5.34:0,5,36	0/0:15,0:15:3.84:0,4,20
chr10	45048351	.	TTC	T	2217.58	PASS	AB=0.989;AC=25;AF=0.446;AN=56;BaseQRankSum=5.083;DP=537;FS=10.066;HRun=0;HaplotypeScore=99.4305;InbreedingCoeff=0.7900;MQ=64.06;MQ0=4;MQRankSum=-2.832;QD=8.80;ReadPosRankSum=-4.692;VQSLOD=1.5642;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,111,1749	1/1:4,0:4:10.71:45,11,0	0/1:23,0:15:1.26:1,0,214	0/0:21,0:15:33.58:0,34,442	1/1:21,1:22:52.12:289,52,0	1/1:21,0:21:18.16:217,18,0	1/1:15,1:16:21.13:219,21,0	1/1:23,0:22:48.86:236,49,0	0/0:20,0:20:38.87:0,39,376	0/1:20,0:20:12:12,0,316	0/0:19,0:19:20.03:0,20,393	0/0:19,0:19:41.81:0,42,364	0/0:15,0:15:30.01:0,30,329	0/0:24,0:24:44.93:0,45,529	0/0:22,0:22:50.85:0,51,524	0/0:24,0:24:26.91:0,27,386	1/1:0,19:17:30.10:422,30,0	0/0:15,0:15:18.09:0,18,236	1/1:23,1:21:36.45:327,36,0	1/1:11,0:11:16.95:92,17,0	1/1:5,0:5:10.71:45,11,0	0/0:12,0:12:14.96:0,15,249	0/0:13,0:13:26.86:0,27,290	0/0:17,0:16:44.84:0,45,404	0/0:26,0:26:39.84:0,40,462	0/1:27,1:28:37.59:230,0,38	1/1:20,0:19:9.74:183,10,0	1/1:15,0:15:17.60:115,18,0
chr10	45048352	.	TC	T	5942.90	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-6.186;DP=529;FS=7.729;HRun=1;HaplotypeScore=77.9161;InbreedingCoeff=0.9797;MQ=64.00;MQ0=4;MQRankSum=0.340;QD=28.85;ReadPosRankSum=-5.099;VQSLOD=2.5655;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,111,1398	1/1:0,4:4:12.04:167,12,0	0/0:25,0:16:8.62:0,9,213	0/0:22,0:16:35.08:0,35,391	1/1:3,19:22:65.87:728,66,0	1/1:9,12:21:48.97:662,49,0	1/1:5,11:16:40.71:547,41,0	1/1:5,18:22:57.13:738,57,0	0/0:19,0:19:38.15:0,38,245	0/0:19,0:19:17.38:0,17,201	0/0:20,0:20:27.15:0,27,288	0/0:19,0:19:40.98:0,41,241	0/0:16,0:16:33.69:0,34,200	0/0:22,0:22:52.83:0,53,347	0/0:22,0:22:57.12:0,57,360	0/0:24,0:24:39.63:0,40,255	1/1:19,0:17:29.52:191,30,0	0/0:15,0:15:21.34:0,21,164	1/1:3,20:20:58.95:631,59,0	1/1:0,10:10:23.79:217,24,0	1/1:1,4:5:13.59:171,14,0	0/0:11,0:11:23.42:0,23,167	0/0:13,0:13:28.93:0,29,185	0/0:17,0:16:43.99:0,44,271	0/0:22,0:22:47.61:0,48,280	1/1:12,16:28:17.79:789,18,0	1/1:7,13:19:40.11:607,40,0	1/1:1,14:15:34.16:495,34,0
chr10	45048629	.	CTT	C	3690.12	PASS	AB=0.647;AC=24;AF=0.429;AN=56;BaseQRankSum=1.669;DP=597;FS=2.210;HRun=13;HaplotypeScore=88.7082;InbreedingCoeff=0.5996;MQ=67.98;MQ0=7;MQRankSum=-0.517;QD=11.79;ReadPosRankSum=6.063;VQSLOD=2.4973;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:18:21.22:0,21,156	0/1:0,0:5:6.16:6,0,16	0/0:32,0:14:20.12:0,20,180	0/1:30,0:14:29.53:30,0,61	0/1:4,20:24:1.20:381,0,1	1/1:2,0:23:16.69:130,17,0	1/1:1,0:17:18.42:81,18,0	0/1:12,0:26:49.52:50,0,63	0/0:14,0:19:47.55:0,48,535	0/0:5,0:17:33.20:0,33,146	0/0:3,1:18:6.32:0,6,125	0/0:26,1:26:31.05:0,31,702	0/0:9,0:9:24.05:0,24,294	0/0:16,0:16:48.04:0,48,534	1/1:5,20:25:51:495,51,0	1/1:5,14:20:23.93:282,24,0	0/0:6,1:26:17.47:0,17,174	1/1:4,11:16:14.96:195,15,0	0/1:9,12:22:11.13:235,0,11	1/1:5,23:33:44.49:618,44,0	1/1:3,6:9:15.02:145,15,0	0/0:21,0:21:51:0,51,626	0/0:30,0:34:71.53:0,72,928	0/0:18,0:19:45.11:0,45,565	0/0:9,0:28:37.94:0,38,162	0/1:6,17:24:9.02:430,0,9	1/1:7,18:29:41.57:439,42,0	1/1:1,6:7:18.03:175,18,0
chr10	45049182	.	C	CGGA	238.90	PASS	AB=0.944;AC=14;AF=0.500;AN=28;BaseQRankSum=0.449;DP=258;FS=1.871;HRun=0;HaplotypeScore=39.1619;InbreedingCoeff=0.1827;MQ=48.34;MQ0=25;MQRankSum=0.286;QD=1.99;ReadPosRankSum=-2.164;VQSLOD=1.0588;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:2.60:0,3,41	./.	./.	./.	1/1:13,0:13:5.97:78,6,0	0/1:11,0:11:0:0,0,0	./.	1/1:11,0:8:0.94:2,1,0	1/1:7,0:6:0.47:1,0,0	0/0:6,0:4:3.01:0,3,35	0/0:5,0:5:3:0,3,26	./.	0/0:3,0:2:3.01:0,3,41	./.	./.	./.	0/1:10,0:10:0.68:1,0,1	./.	1/1:10,0:7:3:26,3,0	1/1:12,0:12:8.97:111,9,0	0/1:22,8:27:27.28:27,0,73	./.	./.	0/0:11,0:10:3.01:0,3,41	./.	0/1:14,0:12:31.97:89,0,32	./.	./.
chr10	45049210	.	GGCA	G	720.59	PASS	AB=0.907;AC=25;AF=0.543;AN=46;BaseQRankSum=3.404;DP=211;FS=4.977;HRun=0;HaplotypeScore=24.6521;InbreedingCoeff=0.1185;MQ=33.61;MQ0=59;MQRankSum=-0.562;QD=5.38;ReadPosRankSum=-0.778;VQSLOD=0.7854;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:9:8.48:0,8,63	./.	./.	./.	1/1:10,0:9:5.04:37,5,0	1/1:3,3:5:2.80:37,3,0	1/1:7,0:6:6.91:90,7,0	1/1:8,5:6:17.42:214,17,0	./.	0/0:3,0:2:3.01:0,3,59	0/1:7,0:4:3.40:3,0,91	0/0:3,0:2:5.93:0,6,46	0/1:3,3:5:3.39:3,0,31	1/1:3,0:3:3.63:14,4,0	./.	0/0:1,0:1:3.01:0,3,50	1/1:6,0:4:9.01:97,9,0	0/0:1,0:1:3.01:0,3,48	0/1:11,0:6:46.47:46,0,125	0/1:9,0:8:3.79:56,0,4	0/1:24,0:18:37.94:38,0,92	1/1:3,2:3:2.50:9,2,0	0/0:3,0:3:3.01:0,3,34	0/1:4,2:5:38.37:38,0,40	0/0:3,0:2:6.02:0,6,94	0/1:13,1:12:99:101,0,104	1/1:4,0:3:3.01:38,3,0	1/1:3,0:2:3.01:39,3,0
chr10	45049213	.	AGAGGAGGAG	A	495.92	PASS	AB=1.000;AC=13;AF=0.310;AN=42;BaseQRankSum=0.944;DP=223;FS=3.853;HRun=0;HaplotypeScore=38.4590;InbreedingCoeff=0.4313;MQ=35.38;MQ0=60;MQRankSum=0.184;QD=6.28;ReadPosRankSum=1.703;VQSLOD=0.8325;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:10:12.04:0,12,186	./.	./.	./.	1/1:4,4:7:5.77:68,6,0	0/0:10,0:7:3.95:0,4,48	0/0:6,0:5:5.41:0,5,15	0/1:13,0:8:4.34:4,0,36	./.	0/0:3,0:3:3.01:0,3,88	0/0:6,0:3:6.02:0,6,189	./.	0/0:7,0:6:6.02:0,6,74	0/0:4,0:4:5:0,5,75	./.	0/0:2,0:2:6.02:0,6,163	0/0:5,0:6:1.54:0,2,16	0/0:2,0:2:6.02:0,6,138	1/1:9,2:5:5.99:101,6,0	./.	1/1:22,1:17:3.01:34,3,0	0/0:7,0:5:7.26:0,7,78	0/0:3,0:3:3.01:0,3,61	0/0:7,0:6:8.61:0,9,72	0/0:4,0:3:6.02:0,6,205	1/1:10,5:13:9.74:266,10,0	1/1:1,3:3:3.01:77,3,0	1/1:2,3:4:3.01:76,3,0
chr10	45049577	.	A	AG	2321.70	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-10.182;DP=394;FS=8.049;HRun=1;HaplotypeScore=36.4274;InbreedingCoeff=0.9125;MQ=67.02;MQ0=0;MQRankSum=2.756;QD=38.06;ReadPosRankSum=-3.334;VQSLOD=1.8412;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:45.10:0,45,564	1/1:0,8:8:21.07:311,21,0	0/0:5,0:5:14.08:0,14,161	0/0:2,0:2:2.99:0,3,23	0/0:21,0:21:60.14:0,60,731	1/1:1,9:10:30.08:422,30,0	1/1:0,8:8:24.08:355,24,0	1/1:1,34:35:99:1393,102,0	0/0:11,0:11:33.10:0,33,416	0/0:14,0:14:42.13:0,42,534	0/0:21,0:21:63.17:0,63,786	0/0:12,0:12:36.12:0,36,467	0/0:9,0:9:27.09:0,27,350	0/0:8,0:8:24.06:0,24,297	0/0:16,0:16:48.15:0,48,610	0/0:20,0:20:60.18:0,60,764	0/0:24,0:23:72.18:0,72,899	0/0:31,0:31:87.21:0,87,1078	0/0:23,0:23:69.21:0,69,874	0/0:15,0:15:42.10:0,42,504	0/0:5,0:5:15.05:0,15,194	0/0:7,0:7:21.06:0,21,260	0/0:7,0:7:21.06:0,21,260	0/0:2,0:2:6.02:0,6,78	0/0:16,0:16:45.14:0,45,570	0/0:21,0:21:63.19:0,63,783	0/0:16,0:16:48.12:0,48,592	0/0:9,0:9:27.09:0,27,350
chr10	45049648	.	A	AT	1794.43	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=-7.750;DP=429;FS=4.252;HRun=6;HaplotypeScore=42.4195;InbreedingCoeff=0.8720;MQ=66.13;MQ0=0;MQRankSum=0.907;QD=27.19;ReadPosRankSum=-4.618;VQSLOD=1.6092;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:33.07:0,33,336	1/1:0,3:3:9.03:113,9,0	0/0:12,0:11:23.54:0,24,223	0/1:9,0:8:2.47:2,0,96	0/0:28,0:28:81.18:0,81,826	1/1:4,11:15:42.13:528,42,0	1/1:0,6:6:18.06:226,18,0	1/1:4,29:33:87.27:1080,87,0	0/0:10,0:10:27.06:0,27,275	0/0:12,0:12:33.07:0,33,336	0/0:21,0:21:60.14:0,60,612	0/0:9,0:9:27.04:0,27,268	0/0:6,0:6:15.03:0,15,153	0/0:12,0:12:36.08:0,36,366	0/0:18,0:18:54.12:0,54,551	0/0:22,0:22:60.11:0,60,604	0/0:19,0:19:48.58:0,49,490	0/0:28,0:28:75.11:0,75,751	0/0:23,0:23:60.12:0,60,606	0/0:16,0:16:45.10:0,45,459	0/0:6,0:6:18.04:0,18,183	0/0:6,0:6:12.02:0,12,122	0/0:16,0:16:45.07:0,45,445	0/0:4,0:4:12.03:0,12,122	0/0:18,0:18:48.10:0,48,490	0/0:28,0:28:78.18:0,78,796	0/0:23,0:23:63.14:0,63,642	0/0:13,0:13:36.08:0,36,367
chr10	45049845	.	CT	C	4946.49	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=14.942;DP=490;FS=13.487;HRun=9;HaplotypeScore=63.0401;InbreedingCoeff=0.9589;MQ=75.30;MQ0=3;MQRankSum=-1.365;QD=21.98;ReadPosRankSum=1.877;VQSLOD=4.7272;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:81.19:0,81,909	1/1:3,12:15:30.01:274,30,0	0/0:17,0:9:0.76:0,1,142	0/0:19,0:15:15.57:0,16,166	1/1:4,16:20:39.01:357,39,0	1/1:2,13:15:33.02:302,33,0	1/1:1,17:18:39.02:357,39,0	1/1:6,30:36:89.98:808,90,0	0/0:12,0:12:33.09:0,33,371	0/0:16,0:16:45.13:0,45,519	0/0:12,2:14:11.65:0,12,388	0/0:18,0:18:49.94:0,50,541	0/0:14,0:14:36.08:0,36,396	0/0:10,0:10:26.95:0,27,292	0/0:19,0:19:48.11:0,48,534	0/0:17,0:17:43.35:0,43,471	1/1:2,21:23:45.02:412,45,0	0/0:17,1:18:20.66:0,21,471	1/1:1,14:15:42.02:384,42,0	1/1:1,10:11:24.01:220,24,0	1/1:0,21:21:54.03:494,54,0	0/0:11,0:11:33.07:0,33,355	0/0:13,0:13:33.10:0,33,381	0/0:17,0:17:48.14:0,48,553	0/0:21,0:21:53.72:0,54,579	1/1:2,19:21:57.01:516,57,0	1/1:0,21:21:63.03:576,63,0	1/1:0,9:9:27.01:247,27,0
chr10	45052049	.	CA	C	5442.70	PASS	AC=20;AF=0.385;AN=52;BaseQRankSum=12.659;DP=802;FS=1.783;HRun=2;HaplotypeScore=104.3681;InbreedingCoeff=0.9833;MQ=35.07;MQ0=105;MQRankSum=-7.940;QD=20.77;ReadPosRankSum=1.859;VQSLOD=4.9185;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:61,0:40:36.12:0,36,539	1/1:2,9:10:12.04:156,12,0	./.	./.	0/0:26,0:22:41.97:0,42,603	1/1:2,23:22:45.15:583,45,0	1/1:5,24:21:12.04:155,12,0	1/1:5,14:16:36.12:467,36,0	0/0:21,0:19:39.60:0,40,584	1/1:8,35:36:93.25:1174,93,0	1/1:2,17:17:27.09:350,27,0	0/0:39,0:33:66.22:0,66,986	0/0:31,0:28:51.11:0,51,718	0/0:30,0:24:47.86:0,48,693	1/1:6,34:35:75.24:972,75,0	1/1:5,25:25:54.03:691,54,0	0/0:39,0:26:18.05:0,18,246	1/1:8,9:9:15.05:195,15,0	0/0:25,0:17:51.17:0,51,763	0/0:30,0:28:54.18:0,54,808	0/0:42,0:27:17.76:0,18,220	0/0:34,0:29:57.14:0,57,808	0/0:29,0:25:60.16:0,60,872	0/0:42,0:27:21.07:0,21,314	1/1:2,27:27:54.18:700,54,0	0/0:28,0:24:69.23:0,69,1031	0/0:29,0:28:63.21:0,63,943	0/0:18,0:7:18.06:0,18,269
chr10	45053666	.	A	AC	2848.12	PASS	AB=0.714;AC=19;AF=0.339;AN=56;BaseQRankSum=11.654;DP=631;FS=1.558;HRun=1;HaplotypeScore=62.7914;InbreedingCoeff=0.8696;MQ=55.81;MQ0=25;MQRankSum=-4.608;QD=16.09;ReadPosRankSum=-2.735;VQSLOD=2.8030;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,105,1323	1/1:1,10:8:9.03:135,9,0	0/0:18,0:5:11.01:0,11,84	0/0:23,0:9:27.08:0,27,330	0/0:19,0:18:51.15:0,51,647	1/1:0,19:15:24.08:359,24,0	1/1:6,16:11:15.05:224,15,0	0/1:9,6:5:53.39:53,0,66	0/0:32,0:32:96.30:0,96,1230	1/1:2,17:11:24.08:345,24,0	1/1:2,4:4:3.01:45,3,0	0/0:25,0:25:75.23:0,75,959	0/0:31,0:31:87.27:0,87,1114	0/0:28,0:28:78.24:0,78,998	1/1:1,33:26:42.14:611,42,0	1/1:3,16:15:33.10:474,33,0	0/0:41,0:41:99:0,120,1526	1/1:1,15:11:27.09:404,27,0	0/0:21,0:18:48.15:0,48,614	0/0:25,0:25:75.24:0,75,957	0/0:33,0:33:99:0,99,1285	0/0:22,0:22:53.66:0,54,670	0/0:13,0:13:36.12:0,36,467	0/0:30,0:30:84.24:0,84,1061	1/1:0,16:13:27.56:405,28,0	0/0:26,0:26:78.25:0,78,1013	0/0:25,0:25:75.24:0,75,973	0/0:5,0:4:12:0,12,112
chr10	45054287	.	TG	T	5614.90	PASS	AB=0.856;AC=52;AF=0.963;AN=54;BaseQRankSum=-3.736;DP=381;FS=8.066;HRun=2;HaplotypeScore=71.1752;InbreedingCoeff=-0.0841;MQ=65.80;MQ0=0;MQRankSum=-3.518;QD=14.97;ReadPosRankSum=2.386;VQSLOD=4.1770;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,16:15:6.02:78,6,0	1/1:0,7:7:11.95:118,12,0	0/1:6,1:7:24.20:24,0,97	0/1:10,3:14:47.47:203,0,47	1/1:1,15:16:9.02:117,9,0	1/1:1,16:17:9.03:117,9,0	1/1:0,20:20:21.07:273,21,0	1/1:0,15:15:45.13:570,45,0	1/1:0,14:14:9.03:116,9,0	1/1:1,17:18:25.40:489,25,0	1/1:0,18:18:15.04:195,15,0	1/1:2,15:17:12.04:156,12,0	1/1:1,11:12:9.03:117,9,0	./.	1/1:1,16:17:15.05:195,15,0	1/1:1,14:15:21.05:256,21,0	1/1:0,3:3:3.01:39,3,0	1/1:0,6:6:9.03:117,9,0	1/1:0,10:10:27.09:351,27,0	1/1:0,15:15:18.06:234,18,0	1/1:1,20:21:30.09:389,30,0	1/1:0,19:19:9.03:117,9,0	1/1:1,15:16:24.08:312,24,0	1/1:1,11:12:3.23:39,3,0	1/1:1,16:16:3.01:39,3,0	1/1:0,12:12:36.11:454,36,0	1/1:0,18:18:33.11:428,33,0	1/1:0,2:2:6.02:76,6,0
chr10	45055110	.	G	GC	20038.30	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=-13.473;DP=669;FS=7.974;HRun=2;HaplotypeScore=57.7609;InbreedingCoeff=0.9944;MQ=87.46;MQ0=0;MQRankSum=-4.736;QD=39.21;ReadPosRankSum=4.249;VQSLOD=5.0563;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:96.30:0,96,1190	0/0:13,0:13:36.11:0,36,446	0/0:24,0:24:68.16:0,68,785	0/0:22,0:22:60.18:0,60,719	1/1:0,24:24:66.22:948,66,0	0/0:20,0:20:60.16:0,60,728	0/0:17,0:17:51.15:0,51,620	0/0:28,0:28:75.23:0,75,921	1/1:0,36:36:99:1469,102,0	1/1:0,20:20:60.17:841,60,0	1/1:0,15:15:42.14:605,42,0	1/1:1,31:32:81.06:1166,81,0	1/1:0,28:28:84.28:1209,84,0	1/1:1,19:20:51.17:729,51,0	1/1:1,26:27:78.26:1113,78,0	1/1:1,16:17:45.15:648,45,0	1/1:1,34:35:96.32:1382,96,0	1/1:0,17:17:45.15:648,45,0	1/1:2,28:30:82.50:1143,82,0	1/1:2,25:27:69.19:970,69,0	1/1:1,28:29:72.24:1037,72,0	1/1:0,28:28:78.26:1123,78,0	1/1:1,23:24:69.23:993,69,0	1/1:2,17:19:51.17:734,51,0	1/1:1,18:19:54.18:777,54,0	1/1:0,28:27:84.24:1167,84,0	1/1:0,29:29:81.27:1166,81,0	1/1:0,7:7:12.04:171,12,0
chr10	45058613	.	ATC	A	7885.73	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=14.519;DP=749;FS=10.476;HRun=0;HaplotypeScore=104.9203;InbreedingCoeff=0.9840;MQ=78.75;MQ0=0;MQRankSum=0.149;QD=29.65;ReadPosRankSum=0.889;VQSLOD=6.3685;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,99,1587	0/0:8,0:8:24.08:0,24,394	0/0:25,0:24:44.63:0,45,711	0/0:39,0:38:41.60:0,42,755	1/1:3,25:28:60.19:768,60,0	1/1:2,28:30:78.25:1003,78,0	1/1:3,23:26:57.19:733,57,0	1/1:8,24:32:69.18:844,69,0	0/0:32,0:32:81.28:0,81,1352	0/0:29,0:29:84.28:0,84,1392	0/0:28,0:28:72.25:0,72,1211	0/0:27,0:27:78.25:0,78,1268	0/0:27,0:27:66.23:0,66,1109	0/0:28,0:28:84.24:0,84,1337	0/0:30,0:30:87.30:0,87,1468	0/0:27,0:26:75.24:0,75,1230	0/0:21,0:21:63.20:0,63,1023	0/0:16,0:16:39.13:0,39,648	1/1:4,18:22:51.11:613,51,0	1/1:2,29:31:81.26:1042,81,0	1/1:3,29:32:75.24:965,75,0	0/0:19,0:19:54.18:0,54,911	0/0:30,0:30:78.27:0,78,1312	0/0:28,0:28:72.25:0,72,1211	0/0:24,0:24:63.22:0,63,1057	1/1:3,22:25:63.19:798,63,0	1/1:2,33:35:81.26:1042,81,0	1/1:3,2:5:6.02:77,6,0
chr10	45059339	.	AACAC	A	1352.69	PASS	AB=0.989;AC=37;AF=0.804;AN=46;BaseQRankSum=-0.078;DP=370;FS=20.700;HRun=0;HaplotypeScore=79.4837;InbreedingCoeff=0.2538;MQ=59.52;MQ0=15;MQRankSum=1.471;QD=5.54;ReadPosRankSum=1.855;VQSLOD=0.1045;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:16:9.03:0,9,146	1/1:12,0:11:3:28,3,0	./.	./.	1/1:7,0:7:3.01:44,3,0	0/0:8,0:8:2.98:0,3,22	0/1:29,0:30:2.75:3,0,43	1/1:17,0:17:18.06:230,18,0	1/1:15,0:15:8.99:77,9,0	1/1:7,1:8:9.02:119,9,0	1/1:6,3:9:3.01:45,3,0	1/1:9,0:9:3:25,3,0	1/1:12,0:12:3:29,3,0	./.	1/1:10,3:13:3.48:47,3,0	1/1:16,1:18:17.79:224,18,0	0/0:21,0:20:27.02:0,27,421	0/1:10,0:10:38.78:80,0,39	1/1:12,0:11:3.01:39,3,0	1/1:4,0:4:6:68,6,0	1/1:15,0:14:9.15:81,9,0	1/1:4,0:4:3.47:26,3,0	./.	1/1:20,0:19:6.93:49,7,0	./.	1/1:4,0:4:3.01:39,3,0	0/1:13,0:13:30.54:66,0,31	1/1:11,0:11:12.04:169,12,0
chr10	45059385	.	GAGAGAGAGA	G	3618.04	PASS	AB=0.909;AC=38;AF=0.731;AN=52;BaseQRankSum=3.108;DP=275;FS=0.000;HRun=0;HaplotypeScore=69.2665;InbreedingCoeff=0.1726;MQ=38.77;MQ0=44;MQRankSum=-0.423;QD=20.79;ReadPosRankSum=1.918;VQSLOD=2.0454;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:15:14.32:0,14,424	1/1:3,0:2:6.02:94,6,0	0/0:32,0:8:23.95:0,24,705	0/0:38,0:10:24.08:0,24,845	./.	0/1:10,0:10:27.29:27,0,69	1/1:10,0:9:5.96:69,6,0	0/1:10,0:9:11.03:11,0,127	1/1:1,7:8:14.63:244,15,0	1/1:4,6:9:9.72:581,10,0	1/1:4,8:9:0.89:2,1,0	1/1:0,3:3:6.02:109,6,0	1/1:3,3:6:15.05:272,15,0	0/0:2,1:2:0:0,0,0	1/1:4,8:12:15.52:453,16,0	1/1:4,6:11:25.35:592,25,0	0/1:15,0:12:25.99:26,0,248	0/1:8,3:9:17.98:623,0,18	0/1:8,0:4:25.28:25,0,66	./.	1/1:8,0:6:3.90:69,4,0	0/1:2,2:4:12.10:61,0,12	1/1:2,1:2:2.84:14,3,0	1/1:2,3:4:2.85:19,3,0	1/1:2,5:7:3.90:98,4,0	1/1:10,1:7:8.72:138,9,0	1/1:3,0:2:3:29,3,0	1/1:3,0:3:2.76:62,3,0
chr10	45059387	.	GAGAGA	G	1417.03	PASS	AB=0.937;AC=33;AF=0.635;AN=52;BaseQRankSum=3.275;DP=280;FS=0.841;HRun=0;HaplotypeScore=70.2507;InbreedingCoeff=0.1370;MQ=39.53;MQ0=43;MQRankSum=-0.725;QD=8.38;ReadPosRankSum=4.246;VQSLOD=1.7047;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:15:11.99:0,12,327	1/1:2,0:2:5.95:56,6,0	0/0:36,0:9:26.71:0,27,517	0/0:39,0:11:27.09:0,27,601	./.	0/1:8,0:9:37.48:52,0,37	1/1:3,6:9:2.98:24,3,0	0/1:4,3:6:40.94:59,0,41	0/1:11,0:11:1.09:81,0,1	0/1:10,0:9:23.38:174,0,23	0/1:12,0:9:0:0,0,0	1/1:3,0:3:5.80:44,6,0	1/1:6,0:6:14.55:109,15,0	0/0:4,0:3:1.82:0,2,5	1/1:13,0:13:15.01:168,15,0	1/1:11,0:11:18.52:209,19,0	0/1:15,0:12:5.08:5,0,199	0/1:11,0:9:44.23:226,0,44	0/1:4,1:2:18.66:53,0,19	./.	1/1:5,1:5:3.01:37,3,0	0/1:5,0:5:22.63:23,0,30	1/1:7,0:6:0.34:1,0,0	0/0:5,0:5:5.90:0,6,39	1/1:7,0:7:3.90:37,4,0	1/1:6,3:6:9.03:104,9,0	1/1:1,4:4:3.01:64,3,0	1/1:1,2:3:2.76:45,3,0
chr10	45059389	.	GAGAGA	G	2417.81	PASS	AB=0.925;AC=40;AF=0.769;AN=52;BaseQRankSum=3.958;DP=288;FS=4.210;HRun=0;HaplotypeScore=69.8414;InbreedingCoeff=0.2670;MQ=42.32;MQ0=44;MQRankSum=-1.872;QD=13.82;ReadPosRankSum=1.942;VQSLOD=2.5089;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:15:11.32:0,11,177	1/1:2,0:2:5.95:77,6,0	0/0:36,0:9:24.49:0,24,459	0/0:45,0:15:33.53:0,34,612	./.	0/1:7,2:9:10.63:54,0,11	1/1:9,1:9:2.93:18,3,0	0/1:6,0:5:35.64:59,0,36	1/1:11,0:11:12.90:150,13,0	1/1:10,0:9:18.18:340,18,0	1/1:12,0:9:0.89:2,1,0	1/1:4,0:4:1.90:51,2,0	1/1:6,0:6:14.93:141,15,0	1/1:4,0:3:3.01:33,3,0	1/1:13,0:13:15.04:237,15,0	1/1:10,1:11:25.35:362,25,0	0/1:13,2:12:19.81:188,0,20	1/1:12,0:10:18.68:396,19,0	1/1:4,0:1:3.01:60,3,0	./.	1/1:6,1:5:3.90:64,4,0	0/1:5,0:5:14.88:31,0,15	1/1:8,0:7:2.71:14,3,0	0/0:6,0:5:2.75:0,3,13	1/1:7,0:7:3.90:60,4,0	1/1:9,1:6:9.03:126,9,0	1/1:6,0:5:3.01:63,3,0	1/1:3,0:3:2.76:46,3,0
chr10	45059393	.	GA	G	1338.11	PASS	AB=0.891;AC=44;AF=0.815;AN=54;BaseQRankSum=3.068;DP=332;FS=8.961;HRun=1;HaplotypeScore=81.4383;InbreedingCoeff=0.2527;MQ=44.39;MQ0=40;MQRankSum=-0.360;QD=5.69;ReadPosRankSum=0.713;VQSLOD=-0.0397;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:16,1:15:11.02:42,11,0	0/1:1,1:2:4.75:16,0,5	0/0:37,0:9:23.91:0,24,267	0/0:49,0:19:41.30:0,41,429	1/1:13,0:12:12.92:100,13,0	1/1:11,0:11:1.05:25,1,0	./.	1/1:11,0:10:7.01:72,7,0	1/1:13,0:13:4.29:45,4,0	1/1:8,2:9:16.68:145,17,0	1/1:11,1:9:0.89:2,1,0	0/1:4,0:4:3.12:3,0,5	1/1:9,0:9:0.71:10,1,0	0/1:8,1:8:5.38:26,0,5	0/1:10,4:14:2.48:111,0,2	1/1:9,2:11:23.82:173,24,0	1/1:12,2:12:19.24:167,19,0	1/1:8,4:10:20.99:167,21,0	1/1:3,0:1:3:27,3,0	1/1:2,0:2:3:26,3,0	1/1:13,1:12:9.37:98,9,0	0/1:7,0:7:2.01:2,0,18	1/1:10,1:10:0.23:12,0,0	0/1:6,0:6:6.24:6,0,7	1/1:5,2:7:3.87:24,4,0	1/1:12,0:9:11.46:85,11,0	1/1:7,0:6:6:54,6,0	1/1:4,0:4:5.58:39,6,0
chr10	45059394	.	A	AG	1076.09	PASS	AB=1.000;AC=39;AF=0.696;AN=56;BaseQRankSum=0.992;DP=351;FS=0.818;HRun=8;HaplotypeScore=92.1423;InbreedingCoeff=0.1408;MQ=46.44;MQ0=40;MQRankSum=0.208;QD=4.34;ReadPosRankSum=-0.909;VQSLOD=0.1712;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,12:14:12.51:139,13,0	0/0:2,0:2:0.10:0,0,20	0/0:38,0:10:23.93:0,24,209	0/0:54,0:20:43.10:0,43,371	1/1:13,0:12:12.92:100,13,0	0/1:10,0:11:12.44:17,0,12	0/1:10,0:9:0:0,0,0	0/1:11,0:10:13.01:46,0,13	0/1:13,0:13:18.12:18,0,25	1/1:10,0:10:11.85:71,12,0	1/1:12,0:9:0.89:2,1,0	0/1:6,0:6:16.09:29,0,16	0/0:8,0:9:12.24:0,12,57	0/1:10,0:9:6.05:25,0,6	0/1:14,0:14:11.69:52,0,12	1/1:11,0:11:18.24:84,18,0	1/1:14,0:12:23.78:200,24,0	1/1:10,0:10:15.28:87,15,0	1/1:3,0:1:3:27,3,0	1/1:3,0:3:5.96:45,6,0	1/1:15,0:13:8.96:79,9,0	0/1:8,0:8:14.71:15,0,21	1/1:12,0:11:2.29:36,2,0	0/1:8,0:8:4.95:40,0,5	1/1:9,0:9:2.02:6,2,0	1/1:13,0:10:4.39:55,4,0	1/1:9,0:8:5.79:37,6,0	1/1:4,0:4:2.74:25,3,0
chr10	45059399	.	G	GA	280.52	PASS	AB=1.000;AC=6;AF=0.107;AN=56;BaseQRankSum=0.779;DP=398;FS=21.232;HRun=0;HaplotypeScore=98.8395;InbreedingCoeff=0.2293;MQ=53.02;MQ0=39;MQRankSum=0.018;QD=3.84;ReadPosRankSum=1.859;VQSLOD=1.5525;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:16,0:14:3.49:30,0,3	0/0:2,0:2:5.99:0,6,63	0/0:45,0:14:28.75:0,29,391	0/0:64,0:24:44.14:0,44,593	0/1:16,0:15:9.09:9,0,59	0/0:13,0:13:21.35:0,21,190	0/0:9,0:9:2.95:0,3,19	0/0:11,0:11:21.33:0,21,171	0/0:14,0:14:28.73:0,29,244	0/1:15,0:14:0.75:1,0,139	0/0:12,0:10:2.90:0,3,16	0/0:7,0:7:18.30:0,18,150	0/0:10,0:10:26.67:0,27,236	0/0:11,0:11:13.73:0,14,195	0/0:14,0:14:21.26:0,21,176	0/0:11,0:11:18.10:0,18,98	1/1:7,7:12:31.82:328,32,0	0/1:12,0:10:31.30:31,0,92	0/0:5,0:3:1.31:0,1,24	0/0:4,0:4:2.54:0,3,21	0/0:17,0:15:23.70:0,24,147	0/0:10,0:10:18.44:0,18,172	0/0:13,0:12:14.45:0,14,111	0/0:8,0:8:11.10:0,11,84	0/0:9,0:9:8.80:0,9,60	0/0:18,0:15:23.97:0,24,230	0/0:10,0:9:11.18:0,11,78	0/0:8,0:8:12.04:0,12,81
chr10	45059406	.	CAG	C	1662.83	PASS	AB=0.981;AC=19;AF=0.339;AN=56;BaseQRankSum=2.795;DP=453;FS=0.000;HRun=0;HaplotypeScore=111.3241;InbreedingCoeff=0.6177;MQ=56.20;MQ0=31;MQRankSum=0.288;QD=7.99;ReadPosRankSum=-0.555;VQSLOD=3.2364;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:19:21.07:0,21,334	0/0:4,0:3:5.98:0,6,90	0/0:54,0:18:26.09:0,26,401	0/1:73,1:28:34.24:34,0,420	0/0:16,1:17:2.22:0,2,535	0/0:15,0:15:23.87:0,24,352	0/0:10,0:10:8.62:0,9,104	0/0:12,0:12:33.10:0,33,502	1/1:6,10:16:35.81:344,36,0	0/1:15,0:14:0.87:1,0,435	0/1:11,0:10:0:0,0,0	1/1:3,5:8:21.07:257,21,0	1/1:8,3:11:15.01:162,15,0	1/1:6,7:13:35.90:395,36,0	0/0:18,0:18:30.10:0,30,433	0/0:13,0:13:19.49:0,19,314	0/0:15,0:14:23.96:0,24,300	0/1:10,1:10:8.86:9,0,323	0/0:6,0:5:9.02:0,9,124	0/0:5,0:5:9.03:0,9,144	0/0:18,0:16:30.10:0,30,449	1/1:6,6:12:27.03:305,27,0	1/1:13,2:14:18.03:206,18,0	1/1:4,4:8:12:130,12,0	0/0:10,0:10:11.15:0,11,163	0/0:17,0:15:36.12:0,36,566	0/0:10,0:10:18.03:0,18,243	0/1:13,0:13:9.90:10,0,273
chr10	45059438	.	CAGAG	C	316.45	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.189;DP=516;FS=20.201;HRun=0;HaplotypeScore=169.7330;InbreedingCoeff=0.7996;MQ=65.46;MQ0=9;MQRankSum=-2.166;QD=22.60;ReadPosRankSum=-1.530;VQSLOD=1.3369;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:17:36.12:0,36,943	0/0:5,0:4:7.44:0,7,118	0/0:57,0:26:45.20:0,45,822	0/0:78,0:36:36.21:0,36,762	0/0:24,0:24:63.18:0,63,1538	0/0:17,0:17:48.13:0,48,1156	0/0:11,0:11:30.05:0,30,623	0/0:21,0:21:60.19:0,60,1400	0/0:17,0:17:21.77:0,22,778	0/0:17,0:17:49:0,49,1046	0/0:16,0:15:19.54:0,20,597	0/0:13,0:13:8.30:0,8,668	0/0:12,0:12:16.63:0,17,511	0/0:21,0:21:37.35:0,37,1089	0/0:20,0:20:45.15:0,45,1068	0/0:15,0:15:21.43:0,21,510	1/1:4,10:13:24.06:410,24,0	0/0:10,0:11:18.79:0,19,490	0/0:13,0:13:39.11:0,39,852	0/0:10,0:10:30.09:0,30,698	0/0:13,0:13:24.08:0,24,530	0/0:16,0:16:36.12:0,36,780	0/0:15,0:14:24.49:0,24,575	0/0:7,0:7:9.03:0,9,243	0/0:11,0:10:22.63:0,23,549	0/0:14,0:14:39.13:0,39,971	0/0:13,0:13:36.09:0,36,831	0/0:15,0:14:39.13:0,39,1011
chr10	45059474	.	A	AAG	8280.15	PASS	AB=0.874;AC=44;AF=0.786;AN=56;BaseQRankSum=-3.330;DP=609;FS=13.475;HRun=0;HaplotypeScore=171.1354;InbreedingCoeff=0.4679;MQ=56.36;MQ0=10;MQRankSum=1.349;QD=18.20;ReadPosRankSum=2.853;VQSLOD=4.5618;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:16:33.10:0,33,400	0/1:10,0:9:17.11:27,0,17	0/0:48,0:27:28.68:0,29,258	0/0:69,0:26:29.68:0,30,239	0/1:17,12:29:12.78:715,0,13	1/1:8,10:18:39.13:618,39,0	1/1:6,10:16:33.11:528,33,0	1/1:21,13:34:47.13:1049,47,0	1/1:15,0:19:11.17:138,11,0	1/1:19,0:23:22.41:168,22,0	1/1:22,0:26:16.24:107,16,0	0/0:19,0:20:1.11:0,1,4	1/1:15,0:17:7.42:36,7,0	1/1:12,0:18:19.17:122,19,0	0/1:21,0:21:4.73:77,0,5	1/1:17,0:16:9.03:50,9,0	1/1:10,8:17:36.57:524,37,0	1/1:8,0:7:2.49:19,2,0	1/1:17,8:23:45.14:682,45,0	1/1:10,15:24:26.77:885,27,0	1/1:6,2:8:12.04:190,12,0	0/1:11,0:14:3.47:44,0,3	1/1:18,0:20:18.94:125,19,0	1/1:8,0:8:0.47:1,0,0	1/1:19,0:17:2.29:43,2,0	1/1:6,12:18:42.14:653,42,0	1/1:8,13:21:57.18:873,57,0	1/1:7,10:17:41.17:607,41,0
chr10	45059522	.	TA	T	10010.79	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=1.664;DP=534;FS=3.309;HRun=9;HaplotypeScore=107.8253;InbreedingCoeff=0.9743;MQ=60.71;MQ0=0;MQRankSum=-5.025;QD=21.86;ReadPosRankSum=3.688;VQSLOD=4.8302;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:51.09:0,51,562	1/1:2,11:13:30.01:274,30,0	0/0:23,0:22:42.11:0,42,468	0/0:12,0:11:17.48:0,17,222	1/1:4,14:18:47.95:425,48,0	1/1:6,13:19:39.47:354,39,0	1/1:3,16:19:48.02:439,48,0	1/1:6,25:31:74.99:674,75,0	1/1:7,16:23:47.51:437,48,0	1/1:1,22:23:63.03:576,63,0	1/1:5,17:22:44.96:411,45,0	1/1:3,19:22:54.01:493,54,0	1/1:1,19:20:56.58:521,57,0	1/1:4,12:16:32.62:300,33,0	1/1:5,16:21:44.32:410,44,0	1/1:3,12:15:32.97:294,33,0	0/0:20,0:19:48.13:0,48,541	1/1:1,14:15:36.02:329,36,0	1/1:5,15:20:13.40:377,13,0	1/1:5,31:35:87.04:796,87,0	1/1:0,12:12:30.02:275,30,0	1/1:2,14:16:42.02:384,42,0	1/1:1,16:17:38.67:356,39,0	1/1:1,11:12:26.94:247,27,0	1/1:1,24:24:71.99:650,72,0	1/1:2,18:20:54.03:494,54,0	1/1:3,16:19:45.02:411,45,0	1/1:1,3:4:9:82,9,0
chr10	45061567	.	CCAGGAGCACTGTGTGGACTGACAGGAGCACTGTGTGGACTGA	C	2295.64	PASS	AB=1.000;AC=29;AF=0.580;AN=50;BaseQRankSum=4.967;DP=797;FS=8.554;HRun=0;HaplotypeScore=264.4576;InbreedingCoeff=0.6896;MQ=28.95;MQ0=198;MQRankSum=1.374;QD=7.53;ReadPosRankSum=1.144;VQSLOD=1.3103;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:38:24.04:0,24,399	1/1:16,0:16:39.08:564,39,0	./.	./.	0/0:26,0:25:6.02:0,6,147	0/0:30,0:26:9.03:0,9,201	0/0:51,0:31:21.07:0,21,345	0/0:24,0:15:42.04:0,42,690	1/1:20,0:12:8.95:93,9,0	1/1:6,8:12:21.98:505,22,0	1/1:9,0:7:5.55:25,6,0	1/1:20,0:15:12.84:139,13,0	1/1:25,0:18:15:205,15,0	1/1:25,0:15:8.99:153,9,0	1/1:16,0:13:5.98:100,6,0	1/1:26,0:18:5.95:42,6,0	0/0:23,0:10:6.02:0,6,90	1/1:23,0:15:3.01:37,3,0	0/0:31,0:21:48.14:0,48,979	0/0:22,0:20:32.93:0,33,455	0/0:140,0:68:2.59:0,3,73	1/1:8,17:23:5.38:52,5,0	1/1:11,0:8:10.67:61,11,0	1/1:29,0:21:4.20:22,4,0	1/1:22,0:19:9.34:426,9,0	0/1:24,0:14:56.94:57,0,693	0/0:33,0:32:32.37:0,32,767	./.
chr10	45063587	.	CCACA	C	2038.24	PASS	AB=0.704;AC=21;AF=0.420;AN=50;BaseQRankSum=-5.732;DP=536;FS=4.193;HRun=0;HaplotypeScore=116.8872;InbreedingCoeff=0.4239;MQ=59.05;MQ0=21;MQRankSum=3.222;QD=8.22;ReadPosRankSum=4.423;VQSLOD=1.8250;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:22,6:28:3.01:47,3,0	0/0:6,0:6:9.03:0,9,213	./.	./.	0/0:20,0:18:6.09:0,6,144	0/0:27,0:23:35.86:0,36,537	0/0:16,0:15:15.04:0,15,213	0/0:26,0:25:14.83:0,15,116	1/1:8,9:19:33.07:437,33,0	0/1:12,1:19:35.56:36,0,59	0/0:5,0:11:3.71:0,4,12	1/1:5,4:9:12.44:170,12,0	1/1:10,10:22:39.08:528,39,0	1/1:6,4:9:10.85:146,11,0	0/1:12,1:20:24.05:34,0,24	0/1:6,3:13:1.99:41,0,2	./.	0/1:8,0:16:31.37:31,0,40	0/0:11,0:9:8.70:0,9,97	0/0:22,0:21:3.18:0,3,73	0/0:21,0:20:4.98:0,5,49	1/1:7,7:14:5.92:94,6,0	1/1:13,4:18:5.62:73,6,0	1/1:20,16:35:9.06:446,9,0	0/1:13,3:23:15.14:127,0,15	0/0:15,0:13:12.96:0,13,172	0/0:12,0:12:15.05:0,15,250	0/0:8,0:8:9.03:0,9,151
chr10	45063619	.	A	ACACAC	3810.91	PASS	AB=0.778;AC=19;AF=0.339;AN=56;BaseQRankSum=-4.942;DP=569;FS=1.032;HRun=0;HaplotypeScore=128.9588;InbreedingCoeff=0.8660;MQ=54.37;MQ0=43;MQRankSum=-4.474;QD=20.06;ReadPosRankSum=-2.880;VQSLOD=3.1141;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:29.64:0,30,367	0/0:7,0:7:15.05:0,15,263	0/0:39,0:17:42.13:0,42,534	0/0:49,0:12:11.19:0,11,289	1/1:5,10:17:11.37:192,11,0	1/1:3,17:23:28.69:687,29,0	1/1:4,11:16:11.48:294,11,0	1/1:10,0:24:57.14:784,57,0	0/0:24,0:24:52.27:0,52,724	0/0:23,0:23:57.19:0,57,750	0/0:13,0:13:27.09:0,27,362	0/0:11,0:11:23.82:0,24,287	0/0:22,0:21:44.29:0,44,634	0/0:15,0:13:25.19:0,25,348	0/0:21,0:21:54.17:0,54,710	0/0:13,0:13:30.10:0,30,402	0/0:21,0:21:33.10:0,33,415	0/0:13,0:13:20.22:0,20,284	1/1:4,9:14:36.10:572,36,0	1/1:6,1:16:11.95:174,12,0	1/1:9,0:18:6.30:69,6,0	0/0:15,0:15:21.01:0,21,272	0/0:17,0:17:20.48:0,20,247	0/0:30,0:29:50.81:0,51,660	0/0:20,0:20:51.17:0,51,686	0/1:15,0:17:30.72:473,0,31	1/1:1,0:14:15.05:349,15,0	1/1:0,0:4:9.03:214,9,0
chr10	45063728	.	CCTTT	C	4341.64	PASS	AB=0.581;AC=19;AF=0.339;AN=56;BaseQRankSum=13.645;DP=520;FS=10.295;HRun=0;HaplotypeScore=113.4105;InbreedingCoeff=0.9175;MQ=76.68;MQ0=6;MQRankSum=-11.693;QD=25.24;ReadPosRankSum=0.690;VQSLOD=3.8033;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:57.13:0,57,859	0/0:11,0:11:33.11:0,33,841	0/0:31,0:28:77.28:0,77,1236	0/0:27,0:27:60.37:0,60,1144	1/1:5,14:13:29.90:381,30,0	1/1:0,24:16:39.07:735,39,0	1/1:5,14:10:20.94:265,21,0	0/1:5,13:11:16.02:100,0,16	0/0:18,0:18:54.13:0,54,1372	0/0:17,0:17:51.15:0,51,1094	0/0:31,0:31:93.30:0,93,2214	0/0:15,0:15:45.13:0,45,1117	0/0:26,0:26:78.14:0,78,1810	0/0:18,0:18:54.19:0,54,1375	0/0:21,0:21:63.19:0,63,1483	0/0:16,0:16:45.15:0,45,1126	0/0:15,0:15:39.10:0,39,619	0/0:11,0:11:33.11:0,33,888	1/1:0,10:7:21:308,21,0	1/1:0,17:9:21.02:377,21,0	1/1:1,8:8:14.95:216,15,0	0/0:16,0:16:48.15:0,48,1159	0/0:20,0:20:54.13:0,54,1245	0/0:17,0:17:48.13:0,48,1129	0/0:14,0:14:42.12:0,42,876	1/1:0,27:24:65.87:943,66,0	1/1:0,20:13:33.11:659,33,0	1/1:6,3:9:27:357,27,0
chr10	45063729	.	CT	C	807.65	PASS	AB=0.888;AC=25;AF=0.446;AN=56;BaseQRankSum=10.055;DP=529;FS=5.555;HRun=12;HaplotypeScore=101.5478;InbreedingCoeff=0.5692;MQ=77.09;MQ0=6;MQRankSum=-7.381;QD=2.76;ReadPosRankSum=3.441;VQSLOD=0.1716;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,19:23:45.89:337,46,0	0/0:10,0:11:26.89:0,27,255	0/1:29,3:28:30.37:30,0,214	0/0:28,0:28:4.36:0,4,278	1/1:19,0:13:5.67:20,6,0	1/1:24,0:16:9.10:57,9,0	0/1:19,0:10:8.81:10,0,9	0/0:18,0:11:0:0,0,0	0/0:18,0:18:45.08:0,45,449	0/0:19,0:19:6.46:0,6,305	0/1:24,4:31:6.30:6,0,605	0/0:13,1:14:14.87:0,15,318	0/0:26,0:27:65.83:0,66,613	0/0:18,0:18:51.01:0,51,487	0/0:22,1:23:24.84:0,25,423	0/1:12,4:16:27.63:28,0,293	1/1:1,14:15:35.86:279,36,0	0/0:11,0:12:29.89:0,30,288	1/1:10,0:7:7:22,7,0	1/1:17,0:9:12.22:38,12,0	1/1:9,0:8:6.10:19,6,0	0/0:15,1:16:19.71:0,20,362	0/1:17,4:21:0.16:0,0,342	0/0:16,1:17:15.83:0,16,336	0/0:14,0:14:28.75:0,29,255	1/1:27,0:24:10.53:60,11,0	1/1:21,0:13:22.41:70,22,0	1/1:8,0:9:8.33:26,8,0
chr10	45063948	.	G	GC	21129.86	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-10.062;DP=702;FS=2.142;HRun=5;HaplotypeScore=60.2366;InbreedingCoeff=0.9969;MQ=75.84;MQ0=0;MQRankSum=-4.850;QD=34.19;ReadPosRankSum=5.089;VQSLOD=4.9476;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:84.21:0,84,902	1/1:0,10:10:30.10:395,30,0	0/0:26,0:26:65.82:0,66,694	0/0:27,0:28:42.31:0,42,593	1/1:2,17:16:45.15:591,45,0	1/1:2,26:27:72.23:947,72,0	1/1:1,19:19:51.17:671,51,0	1/1:2,28:30:84.26:1090,84,0	1/1:1,19:20:48.16:632,48,0	1/1:2,25:27:75.24:985,75,0	1/1:0,22:22:51.17:670,51,0	1/1:3,32:35:93.30:1224,93,0	1/1:5,29:34:81.26:1066,81,0	1/1:3,36:39:99:1302,99,0	1/1:0,31:31:93.30:1224,93,0	1/1:5,21:26:57.19:750,57,0	1/1:0,21:21:60.20:790,60,0	1/1:1,15:16:39.13:513,39,0	1/1:5,21:26:66.04:829,66,0	1/1:2,19:21:54.17:703,54,0	1/1:0,38:38:99:1303,99,0	1/1:1,20:21:57.19:749,57,0	1/1:1,26:27:72.23:947,72,0	1/1:0,25:25:66.21:868,66,0	1/1:0,16:16:42.14:553,42,0	1/1:2,32:33:93.26:1191,93,0	1/1:1,25:25:69.22:908,69,0	1/1:0,6:6:18.06:232,18,0
chr10	45065718	.	TACAA	T	5576.64	PASS	AB=0.897;AC=43;AF=0.796;AN=54;BaseQRankSum=-0.011;DP=619;FS=1.318;HRun=0;HaplotypeScore=130.9250;InbreedingCoeff=0.4372;MQ=57.49;MQ0=5;MQRankSum=-1.204;QD=11.40;ReadPosRankSum=3.685;VQSLOD=4.0349;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:45.75:0,46,679	1/1:9,0:9:2.50:36,3,0	0/0:36,0:26:42.04:0,42,420	0/0:26,0:16:13.25:0,13,179	1/1:29,0:29:0.57:290,1,0	1/1:7,17:24:33.10:506,33,0	1/1:10,7:17:21.07:295,21,0	1/1:27,0:26:48.01:428,48,0	1/1:26,0:26:20.73:235,21,0	1/1:7,22:29:62.77:709,63,0	1/1:6,18:24:8.56:197,9,0	1/1:27,0:27:20.65:251,21,0	1/1:33,0:33:38.78:465,39,0	1/1:15,0:15:5.68:72,6,0	1/1:5,19:24:11.73:203,12,0	1/1:4,15:19:23.93:392,24,0	0/1:16,0:16:22.64:23,0,174	1/1:3,7:10:11.87:167,12,0	0/1:20,0:20:8.31:266,0,8	1/1:29,1:30:29.90:272,30,0	1/1:16,0:16:3.01:51,3,0	1/1:21,0:22:3.01:36,3,0	1/1:21,0:21:5.45:100,5,0	./.	0/1:11,9:19:1.36:174,0,1	1/1:21,0:21:38.82:310,39,0	0/0:22,0:22:0.69:0,1,2	1/1:9,1:10:5.87:98,6,0
chr10	45065730	.	AACAAACAC	A	4124.24	PASS	AB=0.924;AC=25;AF=0.446;AN=56;BaseQRankSum=-5.504;DP=578;FS=0.424;HRun=0;HaplotypeScore=157.8566;InbreedingCoeff=0.1326;MQ=56.98;MQ0=10;MQRankSum=-3.912;QD=10.55;ReadPosRankSum=-0.224;VQSLOD=2.7263;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:45.97:0,46,1211	1/1:3,0:6:5.32:73,5,0	0/0:26,0:16:42.08:0,42,463	0/0:21,0:10:13.25:0,13,179	0/1:30,0:30:99:100,0,825	0/1:21,0:23:14.02:14,0,170	0/1:13,0:15:42.69:43,0,163	0/1:25,0:23:99:352,0,156	1/1:2,22:24:29.60:621,30,0	0/1:25,0:26:99:143,0,335	0/0:20,0:20:29.38:0,29,256	0/1:4,25:29:5.77:591,0,6	1/1:1,30:33:41.60:1067,42,0	1/1:0,16:16:8.45:181,8,0	0/0:22,0:22:15.29:0,15,110	0/0:16,0:17:2.69:0,3,155	0/1:18,0:18:13.61:14,0,591	0/0:12,0:12:2.23:0,2,98	0/1:20,0:19:99:128,0,335	0/1:25,0:25:99:153,0,585	0/0:15,0:15:13.16:0,13,155	1/1:4,17:20:8.65:150,9,0	1/1:2,22:24:15.39:319,15,0	1/1:1,16:17:8.67:51,9,0	0/1:12,0:12:5.90:6,0,144	0/1:23,0:24:99:118,0,337	0/0:18,0:18:14.64:0,15,265	0/0:11,0:11:17.63:0,18,225
chr10	45065732	.	CAA	C	5248.65	PASS	AB=0.973;AC=33;AF=0.589;AN=56;BaseQRankSum=0.125;DP=576;FS=4.294;HRun=3;HaplotypeScore=112.2325;InbreedingCoeff=-0.1446;MQ=56.58;MQ0=11;MQRankSum=2.162;QD=10.78;ReadPosRankSum=8.147;VQSLOD=1.2755;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:45.81:0,46,459	0/1:6,0:5:16.41:16,0,23	0/0:27,0:16:44.98:0,45,450	0/0:21,0:10:13.25:0,13,179	1/1:19,13:31:64.38:876,64,0	1/1:23,0:23:2.98:165,3,0	0/1:13,0:13:44.28:107,0,44	1/1:24,0:22:6.20:372,6,0	0/1:24,0:24:36.30:134,0,36	0/1:25,0:25:30.29:357,0,30	0/1:22,0:22:34.13:34,0,190	0/1:29,0:29:26.47:148,0,26	1/1:33,0:33:8.61:251,9,0	0/1:16,0:16:24.65:35,0,25	0/1:21,0:21:16.14:66,0,16	0/1:17,0:17:7.21:117,0,7	0/1:19,0:18:44.20:44,0,52	0/1:11,0:11:16:64,0,16	1/1:6,14:19:27.33:397,27,0	1/1:13,12:25:63.61:781,64,0	0/1:5,11:16:22.73:95,0,23	0/1:21,0:20:9.07:9,0,70	0/1:24,0:24:53.50:53,0,82	0/0:16,0:16:6.02:0,6,66	0/1:14,0:13:39.54:79,0,40	1/1:5,19:24:62.79:607,63,0	1/1:1,16:17:15.05:226,15,0	1/1:4,7:11:17.78:213,18,0
chr10	45065734	.	A	AAC	494.74	PASS	AB=0.886;AC=5;AF=0.093;AN=54;BaseQRankSum=-1.903;DP=584;FS=1.671;HRun=0;HaplotypeScore=139.7403;InbreedingCoeff=0.2365;MQ=56.21;MQ0=11;MQRankSum=-0.398;QD=5.56;ReadPosRankSum=-2.740;VQSLOD=2.6233;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:13,14:27:37.05:286,0,37	0/0:5,0:5:5.63:0,6,45	0/0:27,0:16:2.95:0,3,33	./.	0/0:32,0:31:14.84:0,15,84	0/0:23,0:24:23.75:0,24,217	0/0:12,0:13:27.57:0,28,198	0/0:23,0:21:8.84:0,9,100	0/0:24,0:24:13.36:0,13,136	0/0:27,0:27:35.78:0,36,288	0/0:22,0:22:32.91:0,33,298	0/0:28,0:28:5.31:0,5,130	0/0:33,0:33:38.52:0,39,206	0/0:16,0:16:8.54:0,9,61	0/0:21,0:21:3.18:0,3,98	0/0:17,0:17:26.62:0,27,185	1/1:16,0:18:19.54:165,20,0	0/0:11,0:11:11.90:0,12,93	0/0:20,0:19:14.48:0,14,70	0/0:25,0:25:24.77:0,25,83	0/0:17,0:17:8.26:0,8,59	0/0:21,0:20:11.73:0,12,94	0/0:24,0:24:5.83:0,6,126	0/0:16,0:16:6.02:0,6,66	0/0:13,0:13:17.65:0,18,132	0/1:26,0:26:6.57:131,0,7	0/1:17,0:17:9.29:33,0,9	0/0:13,0:13:13.52:0,14,61
chr10	45067002	.	GA	G	2595.88	PASS	AB=0.813;AC=29;AF=0.518;AN=56;BaseQRankSum=10.828;DP=466;FS=0.445;HRun=10;HaplotypeScore=62.5775;InbreedingCoeff=0.7659;MQ=61.03;MQ0=12;MQRankSum=0.835;QD=12.66;ReadPosRankSum=3.831;VQSLOD=3.3500;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:90.24:0,90,996	1/1:1,7:8:11.99:104,12,0	0/0:18,0:5:8.74:0,9,66	0/1:25,0:11:2.01:2,0,83	0/0:26,0:25:60.59:0,61,631	0/0:16,0:16:39.10:0,39,424	0/0:7,0:7:21.06:0,21,232	0/0:27,0:26:60.16:0,60,657	1/1:3,10:13:23.98:208,24,0	1/1:4,19:22:47.96:417,48,0	1/1:2,9:10:19.23:159,19,0	0/1:2,5:7:15.18:112,0,15	1/1:2,12:15:32.03:266,32,0	1/1:1,8:9:17.99:156,18,0	1/1:1,6:7:15:130,15,0	1/1:0,7:7:18:156,18,0	0/0:33,0:33:78.21:0,78,862	1/1:3,11:14:30.88:262,31,0	0/0:24,0:21:36.09:0,36,392	0/0:23,0:23:48.13:0,48,531	0/0:4,0:3:6.02:0,6,66	1/1:3,9:12:17.98:156,18,0	1/1:2,8:10:14.89:130,15,0	1/1:0,12:12:29.99:260,30,0	1/1:7,16:23:5.79:279,6,0	0/0:14,1:17:15.70:0,16,347	0/0:29,0:32:84.07:0,84,904	0/1:5,1:6:12.33:12,0,72
chr10	45069599	.	TG	T	5099.23	PASS	AC=18;AF=0.333;AN=54;BaseQRankSum=4.951;DP=554;FS=1.127;HRun=7;HaplotypeScore=85.2992;InbreedingCoeff=0.9986;MQ=71.74;MQ0=0;MQRankSum=-0.166;QD=25.37;ReadPosRankSum=0.371;VQSLOD=5.1293;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,120,1490	0/0:8,0:8:21.07:0,21,264	0/0:19,0:19:47.98:0,48,541	0/0:15,0:15:32.68:0,33,349	1/1:2,11:13:33:323,33,0	1/1:1,26:27:72.16:734,72,0	1/1:5,25:30:72.16:734,72,0	1/1:3,20:23:57.12:579,57,0	0/0:21,0:20:54.16:0,54,664	0/0:21,0:21:54.17:0,54,680	0/0:21,0:21:63.18:0,63,765	0/0:15,0:15:45.14:0,45,562	0/0:12,0:12:24.08:0,24,302	0/0:26,0:25:72.21:0,72,882	0/0:26,0:26:75.23:0,75,930	0/0:19,0:19:51.16:0,51,637	0/0:24,0:23:63.15:0,63,762	0/0:12,0:12:27.09:0,27,334	1/1:1,11:12:33.07:336,33,0	1/1:2,17:19:51.04:504,51,0	1/1:2,29:31:81.18:826,81,0	0/0:15,0:15:39.12:0,39,491	0/0:26,0:26:69.21:0,69,849	0/0:15,0:15:42.09:0,42,510	0/0:13,0:13:33.08:0,33,391	1/1:2,21:23:28.47:605,28,0	1/1:1,22:23:45.09:457,45,0	./.
chr10	45069731	.	T	TAAGGAAGGAAGG	20561.76	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-2.826;DP=583;FS=5.959;HRun=0;HaplotypeScore=181.1340;InbreedingCoeff=0.7815;MQ=55.27;MQ0=5;MQRankSum=0.155;QD=39.62;ReadPosRankSum=-0.232;VQSLOD=3.6589;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:29:11.99:0,12,223	1/1:9,0:20:27.87:740,28,0	0/0:21,0:13:3.01:0,3,58	0/0:14,0:12:3.01:0,3,36	1/1:22,0:29:30.10:1095,30,0	1/1:17,0:24:42.13:913,42,0	1/1:12,0:25:15.05:382,15,0	1/1:27,0:27:30.04:623,30,0	1/1:9,0:18:27.09:683,27,0	1/1:20,14:32:42.09:1877,42,0	1/1:9,14:24:33.11:1711,33,0	1/1:11,7:18:15.05:757,15,0	1/1:12,0:18:15.05:376,15,0	1/1:19,7:26:33.11:1600,33,0	1/1:13,10:24:18.03:898,18,0	1/1:9,8:17:21.07:1177,21,0	1/1:16,0:16:15.05:310,15,0	1/1:12,1:14:12.04:424,12,0	1/1:16,0:15:21.07:547,21,0	1/1:15,0:22:36.05:1451,36,0	1/1:21,0:21:21.02:414,21,0	1/1:9,0:17:20.99:503,21,0	1/1:12,6:20:24.08:1080,24,0	1/1:14,0:22:18.06:444,18,0	1/1:14,0:24:18.06:868,18,0	1/1:18,0:17:24.08:760,24,0	1/1:21,0:21:27.04:687,27,0	1/1:3,0:3:9.03:241,9,0
chr10	45070453	.	G	GA	17188.58	PASS	AB=0.699;AC=50;AF=0.962;AN=52;BaseQRankSum=-1.242;DP=594;FS=3.822;HRun=0;HaplotypeScore=64.0175;InbreedingCoeff=-0.0287;MQ=46.68;MQ0=36;MQRankSum=-1.470;QD=30.75;ReadPosRankSum=-0.701;VQSLOD=4.3398;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:24,6:30:19.80:20,0,871	1/1:2,12:13:21.07:336,21,0	./.	./.	1/1:0,34:34:80.93:1260,81,0	1/1:0,23:23:54.18:861,54,0	1/1:4,12:14:18.01:286,18,0	1/1:3,16:15:45.03:626,45,0	1/1:0,25:25:45.15:717,45,0	1/1:1,25:25:69.24:1094,69,0	1/1:3,24:26:12.61:772,13,0	1/1:0,20:20:39.13:618,39,0	1/1:0,18:18:39.13:621,39,0	1/1:0,12:12:21.07:332,21,0	1/1:0,17:17:27.09:431,27,0	1/1:0,12:12:30.10:479,30,0	1/1:1,21:22:51.09:782,51,0	1/1:1,17:18:39.13:622,39,0	1/1:6,13:15:39.10:595,39,0	1/1:0,32:32:75.20:1165,75,0	1/1:2,14:15:33.11:513,33,0	1/1:0,27:27:51.17:811,51,0	1/1:0,35:35:57.19:909,57,0	1/1:0,11:11:24.08:383,24,0	1/1:2,14:14:33.11:526,33,0	1/1:5,26:28:39.41:1151,39,0	1/1:1,25:26:54.14:833,54,0	0/1:3,10:11:8.61:445,0,9
chr10	45070921	.	CA	C	12449.40	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=4.861;DP=538;FS=2.201;HRun=7;HaplotypeScore=62.4194;InbreedingCoeff=0.9034;MQ=57.11;MQ0=3;MQRankSum=2.719;QD=25.25;ReadPosRankSum=1.431;VQSLOD=5.4310;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:15:33.09:0,33,402	1/1:1,7:8:18.04:184,18,0	0/0:16,0:7:9.03:0,9,110	0/0:14,0:3:3.01:0,3,38	1/1:4,29:33:81.18:825,81,0	1/1:4,24:28:63.14:643,63,0	1/1:3,12:15:33.07:337,33,0	1/1:3,22:23:57.11:575,57,0	1/1:1,16:17:48.11:490,48,0	1/1:1,23:24:66.08:649,66,0	1/1:1,22:23:54.12:551,54,0	1/1:3,19:22:45.10:458,45,0	1/1:1,18:19:47.94:489,48,0	1/1:1,20:21:57.13:582,57,0	1/1:0,22:22:66.15:673,66,0	1/1:0,9:9:27.06:275,27,0	1/1:4,17:21:51.11:520,51,0	1/1:4,18:22:45.10:458,45,0	1/1:2,15:17:42.09:429,42,0	1/1:0,23:23:63.14:641,63,0	1/1:3,7:10:18.04:184,18,0	1/1:2,26:28:75.17:764,75,0	1/1:2,19:21:42.09:428,42,0	1/1:1,14:15:39.09:398,39,0	1/1:2,16:18:45.10:459,45,0	1/1:0,19:19:57.13:582,57,0	1/1:2,24:26:63.14:643,63,0	1/1:0,7:7:21.05:214,21,0
chr10	45071866	.	A	AC	25981.37	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=2.066;DP=689;FS=1.484;HRun=0;HaplotypeScore=101.4776;InbreedingCoeff=0.9927;MQ=63.53;MQ0=1;MQRankSum=-0.041;QD=43.23;ReadPosRankSum=4.668;VQSLOD=4.7618;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:38:86.32:0,86,1402	1/1:0,5:5:15.05:240,15,0	0/0:26,0:23:54.42:0,54,817	0/0:23,0:20:52.37:0,52,667	1/1:0,32:32:84.29:1342,84,0	1/1:0,22:22:51.17:815,51,0	1/1:0,15:15:45.15:720,45,0	1/1:1,31:25:75.25:1171,75,0	1/1:1,24:25:66.22:1055,66,0	1/1:0,28:28:84.29:1344,84,0	1/1:1,23:24:60.20:959,60,0	1/1:0,27:27:72.25:1151,72,0	1/1:0,27:27:72.25:1150,72,0	1/1:0,25:25:66.23:1055,66,0	1/1:1,30:31:78.27:1247,78,0	1/1:0,26:26:78.27:1247,78,0	1/1:2,28:29:78.05:1210,78,0	1/1:0,15:15:42.14:667,42,0	1/1:0,14:10:30.09:453,30,0	1/1:0,29:29:84.29:1343,84,0	1/1:0,22:22:66.23:1055,66,0	1/1:0,23:23:69.24:1103,69,0	1/1:2,32:34:99:1573,99,0	1/1:0,21:21:51.13:813,51,0	1/1:0,34:34:93.32:1487,93,0	1/1:0,30:30:90.31:1439,90,0	1/1:0,21:21:63.21:1007,63,0	1/1:0,9:9:21.07:336,21,0
chr10	45073440	.	CAA	C	3672.63	PASS	AB=0.692;AC=19;AF=0.339;AN=56;BaseQRankSum=0.430;DP=510;FS=2.362;HRun=13;HaplotypeScore=76.7250;InbreedingCoeff=0.8855;MQ=75.30;MQ0=2;MQRankSum=-0.767;QD=17.83;ReadPosRankSum=4.811;VQSLOD=3.1072;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:27:60.12:0,60,763	0/0:2,0:5:12.02:0,12,129	0/0:16,0:14:7.03:0,7,49	0/0:9,0:8:11.51:0,12,103	1/1:5,23:30:47.61:547,48,0	1/1:4,14:19:11.01:278,11,0	1/1:3,11:15:20.96:249,21,0	1/1:8,27:37:66.94:743,67,0	0/0:8,0:11:20.88:0,21,186	0/0:24,0:25:59.66:0,60,799	0/0:21,0:21:47.64:0,48,645	0/0:6,0:16:23.91:0,24,204	0/0:6,0:14:20.84:0,21,170	0/0:4,0:15:17.98:0,18,159	0/0:16,0:17:45.11:0,45,582	0/0:13,0:14:29.55:0,30,340	0/0:8,0:8:21:0,21,229	0/0:14,0:14:33.06:0,33,406	1/1:5,8:13:20.93:204,21,0	1/1:3,18:23:35.59:381,36,0	1/1:1,10:11:21.03:203,21,0	0/0:11,0:31:71.73:0,72,608	0/0:5,0:26:47.36:0,47,419	0/0:4,0:11:12.02:0,12,115	0/0:18,1:23:29.51:0,30,609	1/1:3,15:18:35.95:349,36,0	1/1:4,24:30:62.73:643,63,0	0/1:5,4:9:13.32:74,0,13
chr10	45074526	.	G	GACACAC	4228.76	PASS	AB=0.947;AC=22;AF=0.393;AN=56;BaseQRankSum=-1.256;DP=597;FS=1.463;HRun=0;HaplotypeScore=171.5590;InbreedingCoeff=0.3159;MQ=57.50;MQ0=16;MQRankSum=-1.237;QD=14.10;ReadPosRankSum=2.307;VQSLOD=4.0237;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:27:72.20:0,72,1461	1/1:1,0:9:5.75:53,6,0	0/0:31,0:13:35.91:0,36,625	0/0:55,0:18:15.77:0,16,599	0/0:21,0:20:27.09:0,27,508	0/0:27,0:27:75.21:0,75,1345	0/0:16,0:15:36.12:0,36,709	0/0:18,0:17:44.14:0,44,911	1/1:16,0:16:15:154,15,0	1/1:9,19:26:9.12:1290,9,0	0/1:21,1:20:35.37:130,0,35	0/1:19,0:18:48.23:161,0,48	0/1:27,0:25:99:263,0,106	0/1:20,0:19:19.95:194,0,20	1/1:26,1:26:14.62:787,15,0	1/1:5,19:26:9.03:291,9,0	0/0:13,0:13:14.11:0,14,658	0/1:5,7:13:35.89:328,0,36	0/0:19,0:19:48.22:0,48,929	0/0:30,0:27:66.21:0,66,1236	0/0:14,0:14:17.75:0,18,309	0/1:11,0:11:24.20:24,0,101	1/1:21,0:18:26.84:256,27,0	0/1:14,0:14:35.07:106,0,35	1/1:4,11:14:6.02:135,6,0	0/1:29,0:29:56.57:57,0,1362	0/0:23,0:23:66.70:0,67,1301	0/0:2,0:2:3.01:0,3,54
chr10	45074528	.	CAGAG	C	2616.14	PASS	AB=1.000;AC=18;AF=0.333;AN=54;BaseQRankSum=-3.172;DP=594;FS=0.000;HRun=0;HaplotypeScore=153.2840;InbreedingCoeff=0.6070;MQ=57.09;MQ0=17;MQRankSum=1.604;QD=13.56;ReadPosRankSum=0.673;VQSLOD=3.1302;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:65.74:0,66,988	0/0:11,0:9:6.02:0,6,91	./.	0/0:56,0:18:2.99:0,3,24	1/1:21,0:20:11.87:174,12,0	0/1:27,0:27:5.30:67,0,5	1/1:17,0:16:16.93:152,17,0	0/0:20,0:19:13.84:0,14,56	0/0:16,0:16:2.96:0,3,19	0/0:25,0:22:41.25:0,41,299	0/0:22,0:20:6.82:0,7,44	0/0:19,0:18:4.87:0,5,111	0/0:28,0:26:24.50:0,25,258	0/0:20,0:19:3:0,3,25	0/0:26,0:25:15:0,15,155	0/0:23,0:22:9.03:0,9,154	0/1:12,0:12:99:111,0,260	0/0:13,0:13:12:0,12,128	1/1:16,0:16:24.01:325,24,0	1/1:32,0:29:47.17:668,47,0	1/1:15,0:15:17.95:260,18,0	0/0:11,0:11:11.99:0,12,99	0/0:21,0:18:11.96:0,12,122	0/0:14,0:14:6:0,6,58	0/0:15,0:14:2.22:0,2,44	1/1:22,6:28:5.96:407,6,0	1/1:23,0:23:42.11:587,42,0	1/1:2,0:2:3.01:48,3,0
chr10	45074561	.	AGAG	A	1322.72	PASS	AB=0.800;AC=10;AF=0.179;AN=56;BaseQRankSum=9.705;DP=645;FS=0.414;HRun=0;HaplotypeScore=167.4606;InbreedingCoeff=-0.2196;MQ=61.79;MQ0=16;MQRankSum=-3.750;QD=6.24;ReadPosRankSum=4.485;VQSLOD=2.8593;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:37:99:0,99,1766	0/0:15,0:13:22.66:0,23,171	0/0:32,0:14:38.76:0,39,452	0/0:44,0:20:50.85:0,51,654	0/1:11,3:13:53.46:78,0,53	0/1:19,1:33:99:137,0,106	0/1:17,2:22:91.05:91,0,95	0/0:33,0:36:33.84:0,34,325	0/0:20,0:20:22.02:0,22,136	0/0:28,0:25:68.72:0,69,560	0/0:25,0:23:38.51:0,39,206	0/0:19,0:19:29.76:0,30,237	0/0:26,0:24:32.64:0,33,397	0/0:15,0:14:13.73:0,14,85	0/0:25,0:24:39.26:0,39,310	0/0:25,0:24:29.96:0,30,222	0/1:9,2:12:77.14:77,0,222	0/0:15,0:15:35.35:0,35,303	0/1:13,3:16:83.52:170,0,84	0/1:18,13:28:56.99:357,0,57	0/1:15,2:17:45.80:113,0,46	0/0:21,0:20:3.36:0,3,173	0/0:18,0:15:28.74:0,29,307	0/0:12,0:12:8.76:0,9,116	0/0:18,0:17:20.25:0,20,133	0/1:19,7:27:99:148,0,126	0/1:18,9:27:44.83:290,0,45	0/1:11,1:11:1.49:1,0,99
chr10	45074563	.	AG	A	564.43	PASS	AB=0.940;AC=9;AF=0.161;AN=56;BaseQRankSum=8.271;DP=633;FS=2.017;HRun=1;HaplotypeScore=151.6613;InbreedingCoeff=-0.2078;MQ=63.07;MQ0=12;MQRankSum=-4.009;QD=2.82;ReadPosRankSum=2.258;VQSLOD=0.0669;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:37:92.20:0,92,1254	0/0:16,0:15:19.30:0,19,128	0/0:30,0:14:38.96:0,39,451	0/0:40,0:21:51.12:0,51,640	0/1:16,0:15:53.03:74,0,53	0/1:19,13:32:99:126,0,102	0/1:20,4:23:58.89:59,0,104	0/0:32,3:35:28.39:0,28,285	0/0:20,0:20:21.92:0,22,122	0/0:26,0:23:61.10:0,61,432	0/0:25,0:23:38.07:0,38,167	0/0:19,0:18:30.53:0,31,165	0/0:25,0:23:32.40:0,32,272	0/0:14,0:13:13.60:0,14,65	0/0:25,0:24:15.11:0,15,189	0/0:25,0:24:29.78:0,30,146	0/1:11,1:12:33.59:34,0,89	0/0:15,0:15:34.98:0,35,225	0/1:17,0:17:86.38:92,0,86	0/1:30,0:27:93.28:142,0,93	0/1:16,0:16:41.86:42,0,50	0/0:21,0:20:2.63:0,3,131	0/0:18,0:15:28.72:0,29,242	0/0:13,0:13:7.42:0,7,75	0/0:16,0:15:20.55:0,21,109	0/1:26,1:27:38.42:38,0,146	0/1:26,0:26:70.82:98,0,71	0/0:12,0:11:16.37:0,16,121
chr10	45076163	.	CA	C	2579.61	PASS	AC=38;AF=0.864;AN=44;BaseQRankSum=5.064;DP=319;FS=5.460;HRun=7;HaplotypeScore=31.1047;InbreedingCoeff=0.6809;MQ=54.34;MQ0=58;MQRankSum=-4.755;QD=11.83;ReadPosRankSum=1.209;VQSLOD=1.0267;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:75.24:0,75,943	./.	0/0:27,0:26:42.24:0,42,679	0/0:24,0:19:35.40:0,35,385	1/1:1,7:4:6.01:58,6,0	1/1:0,11:1:3.01:30,3,0	./.	1/1:2,11:6:11.98:105,12,0	1/1:1,12:9:24.05:245,24,0	1/1:4,9:7:12.03:122,12,0	1/1:2,5:5:3.01:31,3,0	1/1:1,11:11:27.06:274,27,0	1/1:0,13:9:24.05:244,24,0	1/1:1,15:13:36.08:365,36,0	1/1:2,12:10:18.03:181,18,0	1/1:3,17:14:26.95:274,27,0	./.	1/1:2,9:9:18.04:183,18,0	1/1:2,11:7:12.02:122,12,0	1/1:3,5:4:3.01:30,3,0	./.	1/1:3,11:8:12.02:122,12,0	1/1:0,5:4:6.01:61,6,0	1/1:0,9:6:15.03:153,15,0	1/1:0,5:2:6.01:59,6,0	./.	1/1:1,12:7:6.01:60,6,0	./.
chr10	45076851	.	AT	A	5743.14	PASS	AC=26;AF=0.520;AN=50;BaseQRankSum=15.880;DP=565;FS=3.447;HRun=2;HaplotypeScore=57.9078;InbreedingCoeff=0.9856;MQ=47.20;MQ0=62;MQRankSum=4.318;QD=22.35;ReadPosRankSum=4.046;VQSLOD=4.9618;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:26:72.24:0,72,1066	0/0:10,0:9:12.03:0,12,162	./.	./.	0/0:44,0:38:69.23:0,69,1033	0/0:12,0:12:36.12:0,36,539	0/0:19,0:18:39.13:0,39,582	0/0:29,0:27:81.27:0,81,1203	1/1:2,21:22:48.15:595,48,0	1/1:1,23:22:63.20:781,63,0	1/1:1,18:15:15.05:186,15,0	1/1:0,21:20:36.11:446,36,0	1/1:0,23:22:54.06:669,54,0	1/1:1,13:14:27.08:334,27,0	1/1:0,20:20:45.14:557,45,0	1/1:0,20:20:36.03:426,36,0	./.	1/1:0,16:15:30.09:372,30,0	0/0:23,0:13:39.12:0,39,559	0/0:23,0:21:51.13:0,51,697	0/0:11,0:11:27.09:0,27,405	1/1:1,26:23:48.12:578,48,0	1/1:1,19:19:21.03:244,21,0	1/1:0,15:15:27.08:335,27,0	1/1:0,15:13:18.06:223,18,0	0/0:29,0:28:81.27:0,81,1213	0/0:28,0:27:66.11:0,66,919	0/0:5,0:5:12.04:0,12,180
chr10	45078138	.	TTTCAAAGATGCAACTATA	T	30078.65	PASS	AB=0.558;AC=47;AF=0.870;AN=54;BaseQRankSum=7.386;DP=370;FS=2.343;HRun=0;HaplotypeScore=208.8622;InbreedingCoeff=0.6937;MQ=59.11;MQ0=0;MQRankSum=-7.537;QD=92.55;ReadPosRankSum=3.188;VQSLOD=4.5305;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:69.15:0,69,5173	1/1:1,5:6:9.03:461,9,0	0/0:10,0:9:21.07:0,21,1190	0/0:11,0:10:24.08:0,24,1381	1/1:2,17:19:45.11:1941,45,0	1/1:3,10:13:24.08:1228,24,0	1/1:1,9:10:21.07:1075,21,0	1/1:9,11:18:30.07:945,30,0	1/1:1,12:13:27.09:1381,27,0	1/1:6,17:23:51.16:2151,51,0	1/1:7,18:25:54.14:2629,54,0	1/1:2,5:7:15.05:768,15,0	1/1:4,9:13:21.07:1075,21,0	1/1:3,9:12:15.05:768,15,0	1/1:1,8:9:18.06:921,18,0	1/1:1,3:4:9.03:461,9,0	./.	1/1:3,4:7:6.02:307,6,0	1/1:5,7:12:21.04:942,21,0	1/1:4,18:22:45.15:2077,45,0	1/1:1,5:6:3.01:154,3,0	1/1:3,13:15:33.07:1555,33,0	1/1:5,7:12:18.06:921,18,0	1/1:1,6:7:18.06:921,18,0	1/1:3,17:19:39.13:1995,39,0	0/1:5,19:24:99:2180,0,204	1/1:3,20:23:57.20:2917,57,0	1/1:0,2:2:6.02:307,6,0
chr10	45078390	.	C	CAAAA	7584.04	PASS	AB=1.000;AC=21;AF=0.389;AN=54;BaseQRankSum=2.595;DP=571;FS=5.248;HRun=10;HaplotypeScore=124.9577;InbreedingCoeff=0.9144;MQ=75.35;MQ0=0;MQRankSum=-3.823;QD=30.58;ReadPosRankSum=-5.162;VQSLOD=2.0865;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:31:63.51:0,64,1093	0/0:8,0:8:21.07:0,21,297	0/1:11,0:10:21.59:22,0,133	0/0:22,0:21:35.86:0,36,439	1/1:15,1:29:50.95:608,51,0	1/1:5,0:22:44.89:498,45,0	1/1:6,1:26:60.15:798,60,0	1/1:12,0:26:50.97:632,51,0	0/0:16,0:17:26.98:0,27,382	0/0:31,0:32:75.12:0,75,1038	0/0:25,0:25:51.10:0,51,684	0/0:15,0:15:36.97:0,37,511	0/0:21,0:21:38.38:0,38,517	0/0:20,0:20:51.17:0,51,722	0/0:18,0:19:45.06:0,45,615	0/0:16,0:16:36.05:0,36,508	./.	0/0:10,0:10:20.68:0,21,297	1/1:18,6:25:39.06:682,39,0	1/1:13,9:24:48.14:946,48,0	1/1:2,9:16:33.11:643,33,0	0/0:25,0:26:57.05:0,57,762	0/0:21,0:21:45.12:0,45,636	0/0:20,0:20:29.88:0,30,424	0/0:19,0:20:16.36:0,16,428	1/1:11,18:30:26.75:1306,27,0	1/1:8,15:29:57.19:1234,57,0	1/1:7,0:8:12.04:216,12,0
chr10	45079940	.	TCCC	T	16471.34	PASS	AC=48;AF=0.889;AN=54;BaseQRankSum=-4.267;DP=568;FS=1.704;HRun=9;HaplotypeScore=111.5722;InbreedingCoeff=0.9925;MQ=89.37;MQ0=0;MQRankSum=-8.166;QD=33.82;ReadPosRankSum=7.401;VQSLOD=3.3599;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:27:51.14:0,51,758	1/1:0,8:8:24.08:333,24,0	0/0:22,0:22:51.17:0,51,976	0/0:32,0:32:75.09:0,75,1317	1/1:2,27:29:75.24:1063,75,0	1/1:3,33:36:93.30:1295,93,0	1/1:2,13:15:33.11:460,33,0	1/1:6,20:26:57.16:805,57,0	1/1:1,21:22:57.19:794,57,0	1/1:2,18:20:54.18:765,54,0	1/1:1,21:22:45.15:637,45,0	1/1:3,17:20:45.14:636,45,0	1/1:1,10:11:24.08:340,24,0	1/1:2,19:21:45.13:630,45,0	1/1:1,15:16:36.12:511,36,0	1/1:3,12:15:33.10:458,33,0	./.	1/1:1,12:13:33.11:468,33,0	1/1:3,17:20:51.11:699,51,0	1/1:1,21:22:51.16:723,51,0	1/1:1,33:34:80.80:1148,81,0	1/1:2,18:20:51.16:724,51,0	1/1:1,18:19:33.11:468,33,0	1/1:0,18:18:42.14:596,42,0	1/1:2,22:24:57.19:792,57,0	1/1:1,25:26:72.23:1020,72,0	1/1:1,24:25:63.21:894,63,0	1/1:2,3:5:15.05:212,15,0
chr10	45081140	.	TACACAC	T	898.58	PASS	AB=0.830;AC=23;AF=0.523;AN=44;BaseQRankSum=0.400;DP=416;FS=25.213;HRun=0;HaplotypeScore=109.7640;InbreedingCoeff=0.3268;MQ=34.14;MQ0=104;MQRankSum=-2.625;QD=4.86;ReadPosRankSum=2.024;VQSLOD=0.4366;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:31:14.10:0,14,233	0/0:8,0:11:2.09:0,2,17	./.	./.	1/1:9,0:16:7.22:75,7,0	./.	0/0:13,0:8:0:0,0,0	0/0:17,0:12:0:0,0,0	1/1:11,1:9:3.01:60,3,0	0/1:14,0:20:34.68:72,0,35	./.	./.	1/1:4,6:11:8.97:97,9,0	0/1:11,1:8:5.62:48,0,6	1/1:6,0:6:3.01:42,3,0	0/1:8,0:6:3.38:16,0,3	./.	0/0:3,0:3:3.01:0,3,43	1/1:9,4:10:5.96:85,6,0	1/1:14,0:13:11.60:103,12,0	0/0:31,0:20:4.78:0,5,25	0/0:9,0:7:0:0,0,0	1/1:12,3:16:11.59:178,12,0	0/0:11,8:15:0:0,0,0	0/0:7,0:7:0:0,0,0	1/1:13,8:19:15.40:210,15,0	1/1:17,0:13:5.26:31,5,0	1/1:6,0:4:1.25:3,1,0
chr10	45082402	.	GA	G	2581.87	PASS	AC=20;AF=0.370;AN=54;BaseQRankSum=5.153;DP=506;FS=7.898;HRun=10;HaplotypeScore=75.5236;InbreedingCoeff=0.9699;MQ=51.47;MQ0=10;MQRankSum=-8.133;QD=15.01;ReadPosRankSum=0.683;VQSLOD=3.6893;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:72.06:0,72,745	0/0:1,0:15:29.82:0,30,164	0/0:23,0:5:9.01:0,9,85	0/0:19,0:6:11.86:0,12,109	1/1:6,12:16:26.96:234,27,0	1/1:6,12:18:35.97:312,36,0	1/1:2,18:18:41.91:364,42,0	1/1:6,13:14:29.96:254,30,0	0/0:1,0:12:17.04:0,17,86	0/0:24,1:24:34.09:0,34,592	0/0:17,0:17:39.09:0,39,423	0/0:2,0:17:23.69:0,24,148	0/0:10,0:14:29.02:0,29,186	0/0:2,0:14:28.44:0,28,142	0/0:17,0:17:42.09:0,42,449	0/0:11,0:11:27.05:0,27,284	./.	0/0:13,0:13:33.08:0,33,357	1/1:5,11:14:29.98:260,30,0	1/1:6,12:18:32.97:286,33,0	1/1:3,4:7:11.98:104,12,0	0/0:9,0:26:52.25:0,52,295	0/0:14,0:30:58.85:0,59,322	0/0:13,0:29:63.92:0,64,444	0/0:24,0:22:45.12:0,45,492	1/1:7,22:27:62.49:545,62,0	1/1:7,13:19:40.93:358,41,0	1/1:5,2:5:9:78,9,0
chr10	45082422	.	GA	G	2674.91	PASS	AB=1.000;AC=19;AF=0.352;AN=54;BaseQRankSum=5.946;DP=513;FS=8.247;HRun=10;HaplotypeScore=78.7579;InbreedingCoeff=0.8576;MQ=54.29;MQ0=5;MQRankSum=-6.666;QD=14.78;ReadPosRankSum=0.985;VQSLOD=3.6146;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:72.32:0,72,721	0/0:13,0:13:32.91:0,33,332	0/0:29,0:9:21.02:0,21,214	0/0:22,0:7:14.95:0,15,142	1/1:6,13:19:18.31:291,18,0	1/1:3,12:15:38.89:328,39,0	1/1:5,16:20:14.77:350,15,0	1/1:5,26:26:53.97:469,54,0	0/0:10,0:10:18.05:0,18,197	0/0:23,0:23:56.35:0,56,595	0/0:21,0:21:7.74:0,8,401	0/0:16,0:16:39.06:0,39,416	0/0:9,0:9:24.06:0,24,265	0/0:14,0:14:1.13:0,1,240	0/0:18,0:18:54.15:0,54,597	0/0:12,0:12:27.07:0,27,299	./.	0/0:15,0:15:36.10:0,36,398	1/1:10,11:17:37.11:306,37,0	1/1:7,13:20:44.70:362,45,0	1/1:2,4:6:8.99:78,9,0	0/0:20,1:20:25.08:0,25,491	0/0:27,0:28:65.98:0,66,696	0/0:28,0:28:63.15:0,63,687	0/0:22,0:20:53.57:0,54,543	1/1:6,18:23:21.06:409,21,0	1/1:6,12:17:23.68:274,24,0	0/1:5,0:5:14.21:14,0,21
chr10	45083659	.	G	GAA	8169.38	PASS	AC=28;AF=0.519;AN=54;BaseQRankSum=-8.586;DP=595;FS=1.109;HRun=9;HaplotypeScore=93.6941;InbreedingCoeff=0.9891;MQ=58.28;MQ0=7;MQRankSum=-2.307;QD=26.70;ReadPosRankSum=1.615;VQSLOD=4.8800;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:17.99:0,18,190	1/1:0,12:12:36.12:554,36,0	0/0:17,0:11:21:0,21,213	0/0:12,0:4:9.02:0,9,94	0/0:29,0:29:75.14:0,75,798	0/0:21,0:23:56.61:0,57,567	0/0:12,0:12:30.05:0,30,319	0/0:29,0:27:66.11:0,66,696	1/1:6,4:25:45.09:493,45,0	1/1:5,20:26:62.14:848,62,0	1/1:3,27:29:75.25:1155,75,0	1/1:7,0:20:33.06:323,33,0	1/1:3,1:18:36.06:362,36,0	1/1:2,0:17:42.07:402,42,0	1/1:4,16:20:42.14:647,42,0	1/1:0,19:19:48.16:739,48,0	./.	1/1:2,19:22:53.66:750,54,0	0/0:14,0:12:30.07:0,30,319	0/0:35,0:35:96.22:0,96,1014	0/0:11,0:11:33.07:0,33,343	1/1:4,0:23:54.09:527,54,0	1/1:9,3:30:57.06:575,57,0	1/1:4,1:19:20.68:304,21,0	1/1:5,13:18:33.11:491,33,0	0/0:31,0:29:68.88:0,69,714	0/0:48,0:47:99:0,126,1324	0/0:15,0:15:39.08:0,39,415
chr10	45084049	.	CTA	C	14084.33	PASS	AC=28;AF=0.519;AN=54;BaseQRankSum=16.959;DP=675;FS=14.115;HRun=0;HaplotypeScore=88.3367;InbreedingCoeff=0.9952;MQ=60.29;MQ0=2;MQRankSum=0.387;QD=44.15;ReadPosRankSum=6.026;VQSLOD=5.5476;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:44.81:0,45,827	1/1:0,10:10:24.08:391,24,0	0/0:22,0:20:60.21:0,60,1193	0/0:21,0:22:46.67:0,47,1169	0/0:35,0:35:99:0,105,2012	0/0:22,0:22:66.23:0,66,1318	0/0:22,0:22:66.21:0,66,1305	0/0:49,0:49:99:0,147,2815	1/1:0,26:26:75.26:1223,75,0	1/1:0,31:31:93.26:1428,93,0	1/1:0,32:32:90.18:1407,90,0	1/1:0,12:11:27.09:440,27,0	1/1:0,20:20:54.18:878,54,0	1/1:0,24:24:69.24:1124,69,0	1/1:1,25:26:49.28:1057,49,0	1/1:0,24:24:69.24:1126,69,0	./.	1/1:2,19:21:57.19:929,57,0	0/0:24,0:24:72.25:0,72,1452	0/0:37,0:37:99:0,111,2149	0/0:35,0:35:99:0,105,2021	1/1:0,26:26:66.18:1048,66,0	1/1:0,27:27:75.25:1223,75,0	1/1:0,17:16:45.15:734,45,0	1/1:0,23:23:66.23:1077,66,0	0/0:29,1:30:41.34:0,41,1616	0/0:37,0:36:99:0,108,2193	0/0:4,0:4:12.04:0,12,244
chr10	45084422	.	GA	G	4532.99	PASS	AC=20;AF=0.370;AN=54;BaseQRankSum=11.934;DP=532;FS=3.066;HRun=9;HaplotypeScore=56.9304;InbreedingCoeff=0.9754;MQ=69.43;MQ0=0;MQRankSum=0.440;QD=22.33;ReadPosRankSum=-0.352;VQSLOD=5.4974;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:78.23:0,78,899	0/0:5,0:5:12.04:0,12,138	0/0:13,0:12:15.17:0,15,200	0/0:19,0:17:30.06:0,30,325	1/1:2,18:20:47.93:439,48,0	1/1:3,24:27:66.03:604,66,0	1/1:3,8:11:5.62:149,6,0	1/1:3,17:20:51.01:462,51,0	0/0:15,0:15:42.12:0,42,485	0/0:25,1:26:44.74:0,45,758	0/0:29,0:29:78.21:0,78,882	0/0:11,0:11:30.09:0,30,346	0/0:13,0:13:27.07:0,27,304	0/0:19,0:19:48.13:0,48,544	0/0:16,0:16:48.13:0,48,543	0/0:18,0:18:48.14:0,48,554	./.	0/0:21,0:21:57.17:0,57,658	1/1:1,14:15:42:380,42,0	1/1:7,26:33:78.03:714,78,0	1/1:3,12:15:36.01:329,36,0	0/0:26,0:26:66.20:0,66,762	0/0:24,0:24:63.19:0,63,727	0/0:13,0:13:39.07:0,39,435	0/0:30,0:30:84.23:0,84,953	1/1:1,23:24:69.04:631,69,0	1/1:6,20:26:54.02:494,54,0	1/1:0,12:12:36.02:329,36,0
chr10	45085169	.	TAA	T	2997.81	PASS	AB=0.672;AC=27;AF=0.519;AN=52;BaseQRankSum=5.809;DP=523;FS=3.212;HRun=15;HaplotypeScore=65.1237;InbreedingCoeff=0.7631;MQ=51.71;MQ0=13;MQRankSum=-0.597;QD=10.74;ReadPosRankSum=6.638;VQSLOD=2.2316;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:20:34.28:0,34,246	1/1:0,6:6:11.99:105,12,0	0/0:14,0:2:3.01:0,3,32	./.	0/0:32,0:35:67.55:0,68,706	0/0:13,0:18:33.02:0,33,342	0/0:6,0:12:21.03:0,21,228	0/0:28,0:23:47.55:0,48,534	1/1:12,10:21:29.16:245,29,0	1/1:6,10:18:27.09:224,27,0	0/1:9,18:27:10.80:296,0,11	1/1:3,11:14:23.68:196,24,0	1/1:4,14:18:32.93:290,33,0	1/1:7,12:20:14.80:132,15,0	1/1:4,8:13:20.95:185,21,0	1/1:4,11:15:29.94:264,30,0	./.	1/1:6,14:20:32.55:290,33,0	0/0:13,0:11:30.01:0,30,313	0/0:28,0:29:51.11:0,51,648	0/0:15,0:17:29.05:0,29,322	1/1:6,18:25:38.55:329,39,0	1/1:8,14:23:5.16:257,5,0	1/1:7,7:13:14:131,14,0	0/1:7,17:25:4.92:253,0,5	0/1:13,1:16:2.77:3,0,199	0/0:23,0:27:68.51:0,69,758	0/0:16,0:17:17.65:0,18,258
chr10	45087181	.	GAA	G	3482.83	PASS	AB=0.628;AC=21;AF=0.389;AN=54;BaseQRankSum=-3.533;DP=590;FS=2.943;HRun=15;HaplotypeScore=84.3254;InbreedingCoeff=0.8823;MQ=58.69;MQ0=4;MQRankSum=10.583;QD=11.93;ReadPosRankSum=9.011;VQSLOD=2.2966;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:11,10:26:7.46:146,0,7	0/0:9,0:9:17.85:0,18,129	0/0:15,0:10:9:0,9,104	0/0:20,0:18:11.72:0,12,171	1/1:8,13:23:22.67:225,23,0	1/1:12,22:35:32.39:542,32,0	1/1:5,9:17:11.84:223,12,0	1/1:11,15:29:33.86:331,34,0	0/0:11,0:14:26.72:0,27,187	0/0:18,0:16:41.69:0,42,308	0/0:31,0:29:36.90:0,37,237	0/0:15,0:15:20.90:0,21,133	0/0:20,0:25:44.52:0,45,320	0/0:15,0:14:32.77:0,33,254	0/0:19,0:19:35.58:0,36,242	0/0:22,0:20:41.61:0,42,302	./.	0/0:10,0:8:5.75:0,6,104	1/1:11,8:20:18.51:194,19,0	1/1:19,26:46:43.32:455,43,0	1/1:6,8:15:25.73:211,26,0	0/0:19,0:28:57.67:0,58,415	0/0:21,0:21:27.54:0,28,241	0/0:10,0:11:8.94:0,9,68	0/0:18,0:16:38.61:0,39,268	1/1:15,18:32:50.36:428,50,0	1/1:10,19:29:59.19:533,59,0	1/1:3,8:13:11.65:194,12,0
chr10	45088480	.	AT	A	11568.35	PASS	AC=48;AF=0.889;AN=54;BaseQRankSum=3.606;DP=525;FS=0.000;HRun=8;HaplotypeScore=95.1548;InbreedingCoeff=0.9965;MQ=77.48;MQ0=0;MQRankSum=-3.826;QD=24.72;ReadPosRankSum=2.601;VQSLOD=5.1339;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:87.24:0,87,1027	1/1:1,14:15:39.06:377,39,0	0/0:15,0:15:22.54:0,23,348	0/0:11,0:11:24.06:0,24,265	1/1:2,20:22:57.08:549,57,0	1/1:2,22:24:63.10:608,63,0	1/1:1,12:13:33.05:319,33,0	1/1:4,27:31:78.02:734,78,0	1/1:0,15:15:36.03:348,36,0	1/1:3,29:32:87.10:828,87,0	1/1:2,18:20:51.07:492,51,0	1/1:2,13:15:36.06:348,36,0	1/1:2,17:19:54.07:516,54,0	1/1:4,16:20:48.08:464,48,0	1/1:1,8:9:24.03:232,24,0	1/1:2,16:18:42.07:406,42,0	./.	1/1:0,10:10:30.05:290,30,0	1/1:3,21:24:63.07:600,63,0	1/1:4,21:25:63.09:607,63,0	1/1:1,13:14:33.05:319,33,0	1/1:1,28:29:78.12:753,78,0	1/1:3,19:22:57.09:549,57,0	1/1:0,12:12:33.05:319,33,0	1/1:4,17:21:45.07:435,45,0	1/1:1,18:19:54.09:522,54,0	1/1:7,23:30:72.11:695,72,0	1/1:0,9:9:27.04:261,27,0
chr10	45089395	.	G	GA	20293.90	PASS	AC=48;AF=0.889;AN=54;BaseQRankSum=10.867;DP=614;FS=0.000;HRun=0;HaplotypeScore=137.4047;InbreedingCoeff=0.9715;MQ=66.77;MQ0=4;MQRankSum=-3.138;QD=39.48;ReadPosRankSum=5.900;VQSLOD=3.8285;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,135,1838	1/1:0,8:8:24.08:383,24,0	0/0:26,0:26:71.69:0,72,898	0/0:24,0:24:66.10:0,66,867	1/1:0,23:22:45.15:718,45,0	1/1:0,20:20:51.17:800,51,0	1/1:0,20:19:57.19:909,57,0	1/1:1,9:3:9.02:122,9,0	1/1:1,29:30:81.28:1280,81,0	1/1:1,29:28:80.85:1213,81,0	1/1:0,21:20:51.17:803,51,0	1/1:0,23:23:60.20:956,60,0	1/1:1,18:19:48.16:764,48,0	1/1:0,16:16:48.16:766,48,0	1/1:0,26:26:72.25:1148,72,0	1/1:0,26:26:66.23:1053,66,0	./.	1/1:0,14:14:30.10:479,30,0	1/1:1,11:8:21.04:289,21,0	1/1:0,26:25:60.20:956,60,0	1/1:0,41:38:90.78:1438,91,0	1/1:0,28:28:75.26:1197,75,0	1/1:0,17:17:30.10:478,30,0	1/1:0,32:32:84.29:1332,84,0	1/1:0,19:19:54.18:862,54,0	1/1:1,29:29:87.27:1343,87,0	1/1:0,18:18:48.16:766,48,0	1/1:0,5:5:15.05:239,15,0
chr10	45089598	.	CAGATAGAT	C	1090.93	PASS	AB=1.000;AC=30;AF=0.652;AN=46;BaseQRankSum=1.981;DP=529;FS=0.000;HRun=0;HaplotypeScore=180.0966;InbreedingCoeff=0.2680;MQ=61.71;MQ0=7;MQRankSum=0.781;QD=3.13;ReadPosRankSum=1.934;VQSLOD=2.2813;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:25:6.02:94,6,0	./.	./.	0/0:28,0:19:0:0,0,0	0/0:14,0:13:9.03:0,9,352	0/1:12,0:12:0:0,0,0	1/1:22,0:21:2.99:24,3,0	./.	1/1:18,0:18:2.68:11,3,0	0/1:35,0:34:99:166,0,105	1/1:20,0:20:6.46:49,6,0	0/0:16,0:16:2.95:0,3,33	1/1:14,0:14:3.01:50,3,0	1/1:19,0:19:4.88:20,5,0	0/0:22,0:21:3.27:0,3,14	0/1:17,0:16:10.56:220,0,11	./.	0/1:16,0:16:10.32:79,0,10	1/1:11,0:13:3.01:56,3,0	1/1:18,0:17:11.98:134,12,0	1/1:20,0:19:11.98:143,12,0	1/1:25,0:24:2.51:24,3,0	1/1:21,0:21:5.99:49,6,0	0/0:9,0:9:2.92:0,3,20	1/1:22,0:22:4.25:35,4,0	0/0:22,0:20:27.58:0,28,538	1/1:25,7:32:3.01:73,3,0	./.
chr10	45089650	.	TAGATAGATAGATAGAC	T	1869.63	PASS	AB=0.979;AC=22;AF=0.458;AN=48;BaseQRankSum=-0.060;DP=465;FS=0.000;HRun=0;HaplotypeScore=166.9275;InbreedingCoeff=0.4299;MQ=33.45;MQ0=42;MQRankSum=-0.089;QD=7.79;ReadPosRankSum=-0.176;VQSLOD=2.6170;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:20:10.76:0,11,69	./.	./.	./.	0/0:18,0:16:11.99:0,12,580	1/1:15,0:15:3:25,3,0	0/1:15,0:13:16.06:42,0,16	0/0:29,0:18:37.15:0,37,248	1/1:12,3:15:5.87:141,6,0	0/1:29,3:27:99:825,0,129	1/1:20,2:21:9.03:169,9,0	1/1:15,0:15:5.49:34,5,0	0/0:16,0:16:7.03:0,7,35	1/1:19,3:21:9.03:224,9,0	0/0:26,0:21:6.02:0,6,158	0/0:17,0:15:20.98:0,21,358	./.	0/1:20,0:19:39.84:40,0,121	0/1:12,0:10:27.48:49,0,27	0/0:14,0:13:9.34:0,9,58	0/0:22,0:17:8.04:0,8,95	1/1:22,3:22:6.02:100,6,0	1/1:13,2:14:5.65:96,6,0	1/1:11,1:12:4.96:56,5,0	1/1:20,0:20:11.53:238,12,0	0/0:26,0:23:58.49:0,58,1354	0/0:18,0:17:17.88:0,18,108	0/0:1,0:1:2.37:0,2,8
chr10	45089654	.	TAGATAGATAGAC	T	1517.45	PASS	AB=0.993;AC=29;AF=0.604;AN=48;BaseQRankSum=3.012;DP=477;FS=1.498;HRun=0;HaplotypeScore=159.7852;InbreedingCoeff=0.2469;MQ=32.63;MQ0=45;MQRankSum=1.469;QD=4.42;ReadPosRankSum=0.453;VQSLOD=2.8764;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:22,2:21:4.84:92,5,0	./.	./.	./.	0/0:18,0:16:9.03:0,9,477	0/1:14,0:14:0.05:0,0,0	1/1:15,0:13:2.81:24,3,0	0/0:31,0:21:45.73:0,46,306	1/1:17,0:17:8.49:87,8,0	0/1:33,0:28:99:565,0,99	1/1:24,0:23:8.98:75,9,0	0/0:15,0:15:2.76:0,3,16	1/1:13,3:16:1.74:48,2,0	1/1:21,0:20:8.06:90,8,0	0/0:25,0:20:3.48:0,3,57	0/1:17,0:15:31.32:53,0,31	./.	0/1:19,1:19:3.41:163,0,3	0/1:14,0:11:43.44:66,0,43	1/1:14,0:13:11.98:134,12,0	1/1:21,0:16:8.95:93,9,0	1/1:27,0:24:5.03:31,5,0	1/1:15,0:14:5.88:48,6,0	0/1:11,0:11:0.73:1,0,14	1/1:21,0:21:6.78:81,7,0	0/0:26,0:24:47.42:0,47,917	0/1:19,0:18:18.15:18,0,40	0/0:1,0:1:2.37:0,2,8
chr10	45089676	.	GATACATAC	G	1762.82	PASS	AB=1.000;AC=16;AF=0.500;AN=32;DP=412;FS=0.000;HRun=0;HaplotypeScore=116.2128;InbreedingCoeff=0.4422;MQ=29.21;MQ0=38;QD=11.37;VQSLOD=1.7959;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:11,13:20:0.47:0,0,1	./.	./.	./.	./.	0/0:10,0:10:0:0,0,0	0/1:12,0:11:0.37:0,0,0	1/1:35,0:31:32.30:225,32,0	1/1:15,0:15:2.59:46,3,0	1/1:29,0:24:39.11:679,39,0	./.	./.	0/1:18,0:18:0.02:0,0,0	0/0:23,0:22:0:0,0,0	./.	0/0:15,0:13:0.47:0,0,1	./.	0/0:9,0:9:0:0,0,0	1/1:11,0:10:9.03:153,9,0	./.	./.	./.	./.	0/0:8,0:8:0:0,0,0	0/0:14,0:15:0.47:0,0,1	1/1:16,0:15:21.07:369,21,0	1/1:18,0:17:18.06:309,18,0	1/1:1,0:1:3.01:55,3,0
chr10	45089704	.	CATACATACAT	C	4153.07	PASS	AB=1.000;AC=19;AF=0.559;AN=34;BaseQRankSum=0.698;DP=464;FS=3.666;HRun=0;HaplotypeScore=106.8643;InbreedingCoeff=0.5241;MQ=28.38;MQ0=49;MQRankSum=-1.900;QD=22.09;ReadPosRankSum=3.071;VQSLOD=2.7103;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:23:15.52:0,16,192	./.	0/0:19,0:1:3.01:0,3,53	./.	./.	./.	1/1:1,8:8:3.01:42,3,0	1/1:3,21:22:63.09:800,63,0	1/1:21,0:22:2.20:58,2,0	1/1:15,17:25:58.01:1366,58,0	./.	0/0:18,0:18:0.47:0,0,1	0/1:21,0:20:0.01:0,0,0	1/1:30,0:29:2.83:29,3,0	./.	0/0:8,10:16:0.47:0,0,1	./.	0/0:5,0:5:2.88:0,3,15	1/1:2,8:9:18.05:398,18,0	./.	./.	./.	./.	0/0:7,0:7:0:0,0,0	0/0:6,12:18:0.47:0,0,1	1/1:8,7:13:28.30:714,28,0	1/1:11,8:17:27.96:606,28,0	1/1:4,1:5:5.14:141,5,0
chr10	45089708	.	CATACAT	C	2569.10	PASS	AB=0.650;AC=20;AF=0.667;AN=30;BaseQRankSum=1.918;DP=466;FS=5.697;HRun=0;HaplotypeScore=104.1616;InbreedingCoeff=0.5270;MQ=28.45;MQ0=52;MQRankSum=-3.423;QD=12.72;ReadPosRankSum=3.374;VQSLOD=1.9895;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:24:21.54:0,22,268	./.	0/0:25,0:1:3.01:0,3,38	./.	./.	./.	1/1:10,0:8:2.97:41,3,0	1/1:24,0:22:53.69:519,54,0	1/1:13,9:22:2.18:73,2,0	1/1:31,0:24:49.30:806,49,0	./.	0/1:12,9:19:0:0,0,0	0/1:7,14:20:0.01:0,0,0	1/1:6,23:28:2.83:29,3,0	./.	0/0:23,0:20:0.36:0,0,0	./.	0/0:4,0:4:0:0,0,0	1/1:10,0:9:18.05:283,18,0	./.	./.	./.	./.	./.	./.	1/1:12,0:10:25.33:414,25,0	1/1:17,0:16:27.96:400,28,0	1/1:5,0:5:5.19:104,5,0
chr10	45089712	.	CAT	C	1323.88	PASS	AB=1.000;AC=19;AF=0.792;AN=24;BaseQRankSum=3.860;DP=455;FS=5.262;HRun=0;HaplotypeScore=98.0975;InbreedingCoeff=0.5660;MQ=28.48;MQ0=52;MQRankSum=-3.742;QD=7.23;ReadPosRankSum=3.369;VQSLOD=2.8509;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:26:24.08:0,24,304	./.	0/0:25,0:1:3.01:0,3,38	./.	./.	./.	1/1:10,0:8:2.97:41,3,0	1/1:23,1:22:21.92:297,22,0	1/1:15,7:22:2.64:28,3,0	1/1:29,0:21:46:385,46,0	./.	./.	./.	1/1:28,0:27:3:29,3,0	./.	0/1:22,0:19:0:0,0,0	./.	./.	1/1:11,0:9:17.97:178,18,0	./.	./.	./.	./.	./.	./.	1/1:13,0:11:25.21:192,25,0	1/1:19,0:18:27.88:206,28,0	1/1:5,0:5:5.58:69,6,0
chr10	45089724	.	CAG	C	1294.16	PASS	AC=18;AF=0.643;AN=28;BaseQRankSum=0.402;DP=450;FS=9.539;HRun=0;HaplotypeScore=106.4047;InbreedingCoeff=0.4622;MQ=28.30;MQ0=50;MQRankSum=-3.568;QD=8.63;ReadPosRankSum=1.158;VQSLOD=2.9462;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:30:39.06:0,39,600	./.	0/0:25,0:1:3.01:0,3,38	./.	./.	./.	1/1:5,0:3:2.73:41,3,0	1/1:11,0:8:21.07:294,21,0	1/1:19,4:22:2.71:16,3,0	1/1:21,9:23:34.53:461,35,0	./.	./.	./.	1/1:27,5:31:2.97:45,3,0	0/0:28,3:27:0:0,0,0	./.	./.	./.	1/1:10,1:9:7.36:126,7,0	./.	./.	0/0:20,1:18:0:0,0,0	0/0:8,8:16:0:0,0,0	./.	./.	1/1:7,5:11:16.52:185,17,0	1/1:9,9:18:5.66:185,6,0	1/1:2,4:6:1.15:39,1,0
chr10	45089861	.	CAT	C	8824.96	PASS	AB=1.000;AC=28;AF=0.538;AN=52;BaseQRankSum=0.428;DP=435;FS=16.070;HRun=0;HaplotypeScore=86.8249;InbreedingCoeff=0.7886;MQ=71.75;MQ0=1;MQRankSum=2.564;QD=28.47;ReadPosRankSum=3.583;VQSLOD=5.5717;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:63.21:0,63,1048	./.	0/0:11,0:11:11.78:0,12,156	0/1:9,0:9:4.11:4,0,23	0/0:6,0:12:14.99:0,15,128	0/0:3,0:4:3:0,3,27	0/0:1,0:3:3:0,3,27	0/0:18,0:25:56.60:0,57,430	1/1:1,18:18:42.14:540,42,0	1/1:3,33:34:93.26:1164,93,0	1/1:5,16:21:42.14:540,42,0	1/1:1,14:14:36.12:463,36,0	1/1:1,26:26:63.20:810,63,0	1/1:1,24:24:63.12:788,63,0	1/1:1,29:28:69.22:887,69,0	1/1:3,16:19:39.13:502,39,0	./.	1/1:0,14:13:30.10:386,30,0	0/0:5,0:5:2.98:0,3,21	0/0:8,0:10:6:0,6,52	0/1:6,0:6:0:0,0,0	1/1:4,23:27:63.20:810,63,0	1/1:2,19:21:51.06:656,51,0	1/1:2,13:15:33.11:424,33,0	1/1:3,23:26:66.21:849,66,0	0/0:8,0:13:8.95:0,9,71	0/0:4,0:6:5.80:0,6,40	0/0:5,0:9:15:0,15,129
chr10	45090259	.	T	TG	4509.69	PASS	AC=20;AF=0.370;AN=54;BaseQRankSum=-5.555;DP=602;FS=1.960;HRun=0;HaplotypeScore=64.1238;InbreedingCoeff=0.9690;MQ=72.62;MQ0=10;MQRankSum=-6.421;QD=26.53;ReadPosRankSum=-2.943;VQSLOD=4.2905;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:96.28:0,96,1303	0/0:7,0:7:18.06:0,18,247	0/0:34,0:25:72.22:0,72,964	0/0:29,0:23:65.32:0,65,813	1/1:2,16:16:18.06:287,18,0	1/1:0,18:16:27.09:431,27,0	1/1:0,21:17:27.09:431,27,0	1/1:0,19:13:33.07:499,33,0	0/0:30,0:30:75.25:0,75,1049	0/0:25,0:25:66.18:0,66,853	0/0:10,0:10:30.10:0,30,417	0/0:30,0:30:72.24:0,72,1007	0/0:24,0:24:51.17:0,51,710	0/0:35,0:35:72.22:0,72,1007	0/0:36,0:36:87.27:0,87,1198	0/0:35,0:35:66.20:0,66,922	./.	0/0:15,0:15:42.14:0,42,587	1/1:3,12:10:24.08:376,24,0	1/1:2,16:15:27.09:431,27,0	1/1:1,36:34:81.28:1289,81,0	0/0:24,0:24:63.20:0,63,861	0/0:20,0:20:45.15:0,45,629	0/0:28,0:28:78.26:0,78,1091	0/0:11,0:11:33.11:0,33,459	1/1:0,9:8:21.07:336,21,0	1/1:0,13:13:24.08:383,24,0	1/1:0,2:2:3.01:48,3,0
chr10	45091259	.	ACC	A	10630.66	PASS	AB=0.934;AC=25;AF=0.463;AN=54;BaseQRankSum=-15.171;DP=817;FS=4.406;HRun=4;HaplotypeScore=148.7444;InbreedingCoeff=0.6455;MQ=48.87;MQ0=62;MQRankSum=-3.506;QD=23.89;ReadPosRankSum=-1.209;VQSLOD=2.4757;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:94.01:0,94,1684	0/1:13,1:11:13.38:13,0,192	0/0:35,0:12:36.07:0,36,548	0/0:25,2:9:23.91:0,24,380	1/1:4,37:38:93.30:1350,93,0	1/1:2,24:23:54.16:769,54,0	1/1:1,31:31:69.23:1005,69,0	1/1:0,28:28:84.28:1230,84,0	0/1:34,2:30:28.04:28,0,508	0/0:33,0:32:22.17:0,22,418	0/0:25,1:21:8.02:0,8,309	0/0:30,0:22:58.72:0,59,463	0/1:27,0:23:3.25:3,0,350	0/0:30,0:25:71.89:0,72,626	0/0:41,1:39:57.84:0,58,783	0/1:30,2:26:14.71:15,0,470	./.	0/0:20,0:18:23.34:0,23,262	1/1:2,20:18:48.16:702,48,0	1/1:1,29:26:66.22:963,66,0	1/1:3,54:49:99:1889,129,0	0/0:30,0:27:49.83:0,50,373	0/0:25,1:23:40.49:0,40,282	0/1:14,3:17:49.51:50,0,168	0/0:26,0:24:65.57:0,66,506	1/1:1,27:23:63.18:900,63,0	1/1:4,38:36:66.77:1229,67,0	1/1:0,13:13:33.11:484,33,0
chr10	45091261	.	C	CA	659.66	PASS	AB=0.761;AC=13;AF=0.241;AN=54;BaseQRankSum=6.498;DP=822;FS=8.746;HRun=0;HaplotypeScore=173.0717;InbreedingCoeff=-0.3148;MQ=48.64;MQ0=65;MQRankSum=-3.213;QD=1.86;ReadPosRankSum=2.372;VQSLOD=2.3584;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,105,1462	0/1:11,3:11:2.31:2,0,99	0/0:36,0:12:36.10:0,36,469	0/0:28,0:9:1.99:0,2,231	0/0:41,0:38:56.65:0,57,162	0/0:26,0:23:32.44:0,32,90	0/0:31,0:30:42.69:0,43,121	0/0:31,0:28:50.61:0,51,138	0/1:26,10:30:37.70:38,0,304	0/1:28,5:32:25.81:26,0,229	0/1:20,9:24:75.31:75,0,146	0/1:20,11:23:46.95:47,0,214	0/1:18,9:23:58.84:59,0,176	0/1:21,9:25:19.63:20,0,310	0/0:35,6:38:28.16:0,28,459	0/1:23,10:27:21.49:21,0,273	./.	0/1:12,9:19:93.22:93,0,125	0/0:21,0:17:29.29:0,29,82	0/0:29,0:25:39.04:0,39,106	0/0:56,0:48:78.35:0,78,217	0/1:21,9:27:99:113,0,153	0/1:17,12:25:94.52:169,0,95	0/1:8,9:17:64.12:133,0,64	0/1:19,6:24:10.49:10,0,231	0/0:29,0:24:36.08:0,36,99	0/0:40,0:34:55.27:0,55,159	0/0:13,0:13:19.99:0,20,55
chr10	45091846	.	ACAGGAGCACTGTGTGAACTGT	A	415.44	PASS	AB=1.000;AC=21;AF=0.438;AN=48;BaseQRankSum=-2.489;DP=535;FS=8.082;HRun=0;HaplotypeScore=101.3764;InbreedingCoeff=0.3509;MQ=26.87;MQ0=159;MQRankSum=0.165;QD=1.46;ReadPosRankSum=0.825;VQSLOD=0.7147;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:16:1.25:3,1,0	0/0:6,0:4:2.96:0,3,19	./.	./.	0/0:22,0:20:2.46:0,2,60	0/0:11,0:5:1.25:0,1,3	0/1:14,0:9:0.09:0,0,0	0/0:11,0:4:5.93:0,6,40	1/1:17,0:9:2.97:20,3,0	0/0:13,0:8:2.38:0,2,32	0/1:10,0:8:0:0,0,0	1/1:23,0:9:2.97:20,3,0	1/1:14,0:10:6:60,6,0	1/1:21,0:15:6.71:75,7,0	1/1:19,0:12:3.01:35,3,0	1/1:29,0:22:17.99:193,18,0	0/0:64,0:51:27.09:0,27,378	0/1:23,0:11:5.62:74,0,6	./.	0/1:14,0:10:8.07:8,0,25	0/1:38,0:11:7.80:8,0,8	./.	0/0:6,0:4:0:0,0,0	1/1:34,0:19:5.98:54,6,0	0/0:15,0:9:2.97:0,3,20	0/0:18,0:10:16.97:0,17,107	0/0:17,0:11:6.73:0,7,36	0/0:2,0:2:3.73:0,4,16
chr10	45092252	.	AT	A	6132.67	PASS	AC=20;AF=0.370;AN=54;BaseQRankSum=-6.264;DP=623;FS=2.818;HRun=6;HaplotypeScore=181.8621;InbreedingCoeff=0.9941;MQ=70.22;MQ0=9;MQRankSum=-5.257;QD=25.55;ReadPosRankSum=0.428;VQSLOD=2.4996;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,126,1600	0/0:10,0:10:12.04:0,12,158	0/0:19,0:18:51.12:0,51,633	0/0:23,0:24:26.59:0,27,612	1/1:7,27:32:62.99:664,63,0	1/1:1,23:20:45.11:483,45,0	1/1:0,30:28:72.18:773,72,0	1/1:0,24:24:69.17:741,69,0	0/0:25,0:23:69.22:0,69,908	0/0:25,0:24:63.20:0,63,828	0/0:11,0:9:21.07:0,21,276	0/0:26,0:25:66.21:0,66,868	0/0:21,0:20:51.17:0,51,667	0/0:19,0:19:48.08:0,48,597	0/0:29,0:29:75.19:0,75,954	0/0:31,0:31:84.25:0,84,1078	./.	0/0:14,0:14:33.05:0,33,399	1/1:2,15:17:45.07:464,45,0	1/1:0,17:16:42.04:437,42,0	1/1:1,31:32:87.22:935,87,0	0/0:22,0:22:54.12:0,54,674	0/0:17,0:14:33.05:0,33,413	0/0:24,0:21:51.64:0,52,672	0/0:24,0:20:51.02:0,51,650	1/1:0,31:28:84.20:895,84,0	1/1:0,21:18:45.11:483,45,0	1/1:0,10:8:24.06:258,24,0
chr10	45092732	.	C	CT	358.04	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-3.243;DP=589;FS=0.000;HRun=6;HaplotypeScore=56.1760;InbreedingCoeff=0.9929;MQ=61.83;MQ0=8;MQRankSum=0.123;QD=25.57;ReadPosRankSum=0.381;VQSLOD=3.4058;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:96.21:0,96,979	0/0:12,0:12:36.05:0,36,358	0/0:22,0:17:45.07:0,45,448	0/0:16,0:11:24.05:0,24,245	0/0:25,1:26:31.41:0,31,635	0/0:20,0:20:57.11:0,57,574	0/0:19,0:14:36.04:0,36,356	0/0:14,0:11:33.07:0,33,336	0/0:18,0:18:30.06:0,30,306	0/0:33,0:33:90.20:0,90,918	0/0:24,0:24:60.13:0,60,612	0/0:16,0:16:33.04:0,33,323	0/0:23,0:23:62.67:0,63,642	0/0:17,0:17:39.09:0,39,397	0/0:18,0:18:36.06:0,36,360	0/0:15,0:15:26.91:0,27,275	1/1:0,14:14:36.12:453,36,0	0/0:20,0:20:51.12:0,51,520	0/0:19,0:18:51.11:0,51,520	0/0:25,0:25:63.13:0,63,643	0/0:24,0:22:66.15:0,66,672	0/0:20,0:20:51.11:0,51,520	0/0:24,0:24:66.15:0,66,673	0/0:21,0:21:51.11:0,51,520	0/0:18,0:18:54.12:0,54,550	0/0:32,0:31:90.21:0,90,918	0/0:26,0:24:60.13:0,60,612	0/0:9,0:8:24.05:0,24,244
chr10	45093210	.	ACT	A	8551.86	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=13.639;DP=476;FS=14.334;HRun=0;HaplotypeScore=59.0620;InbreedingCoeff=0.9914;MQ=67.83;MQ0=0;MQRankSum=-0.133;QD=41.51;ReadPosRankSum=-0.904;VQSLOD=5.3004;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:84.29:0,84,1557	0/0:6,0:6:18.06:0,18,337	0/0:9,0:9:21.07:0,21,370	0/0:5,0:5:11.86:0,12,154	1/1:0,24:24:69.23:1016,69,0	1/1:0,14:14:36.12:530,36,0	1/1:0,17:17:45.15:662,45,0	1/1:0,29:29:87.29:1281,87,0	0/0:13,0:13:39.13:0,39,730	0/0:18,0:18:54.18:0,54,983	0/0:22,0:22:60.21:0,60,1113	0/0:8,0:8:21.07:0,21,382	0/0:10,0:10:30.10:0,30,562	0/0:17,0:17:51.17:0,51,943	0/0:17,0:17:51.17:0,51,955	0/0:15,0:15:42.14:0,42,787	0/0:21,0:21:60.21:0,60,1123	0/0:12,0:12:36.12:0,36,659	1/1:1,25:25:72.23:1043,72,0	1/1:0,20:20:57.19:839,57,0	1/1:2,17:19:51.17:751,51,0	0/0:16,0:16:45.15:0,45,843	0/0:27,0:26:78.25:0,78,1407	0/0:9,0:9:27.09:0,27,505	0/0:17,0:17:48.16:0,48,899	1/1:0,20:20:60.20:883,60,0	1/1:0,30:30:87.06:1281,87,0	1/1:1,6:7:18.06:265,18,0
chr10	45093648	.	G	GTTT	9027.96	PASS	AB=0.760;AC=36;AF=0.643;AN=56;BaseQRankSum=0.250;DP=514;FS=2.602;HRun=10;HaplotypeScore=90.1683;InbreedingCoeff=0.8724;MQ=70.45;MQ0=0;MQRankSum=-2.696;QD=25.08;ReadPosRankSum=-1.169;VQSLOD=3.5855;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:78.07:0,78,929	1/1:0,0:1:1.25:3,1,0	0/0:13,0:14:16.03:0,16,136	0/1:14,0:12:1.17:1,0,62	1/1:4,28:34:87.23:1577,87,0	1/1:3,0:19:43.11:339,43,0	1/1:2,0:6:11.95:91,12,0	1/1:5,23:29:72.22:1321,72,0	0/0:18,0:18:45.09:0,45,547	1/1:1,0:25:30.41:89,30,0	1/1:3,0:35:38.93:91,39,0	0/0:9,0:9:21.04:0,21,255	0/0:19,0:19:45.10:0,45,547	0/0:15,0:15:36.05:0,36,424	1/1:1,0:15:17.44:41,17,0	0/1:0,0:13:1.19:15,0,1	1/1:9,3:13:22.60:331,23,0	1/1:2,0:12:12.46:28,12,0	1/1:7,13:19:44.17:736,44,0	1/1:6,20:30:75.21:1320,75,0	1/1:5,17:22:45.15:865,45,0	0/0:13,0:15:32.82:0,33,432	0/0:24,0:25:57.08:0,57,674	0/0:8,0:9:17.94:0,18,200	1/1:1,0:21:18.69:44,19,0	1/1:2,14:18:45.13:829,45,0	1/1:4,17:22:54.18:974,54,0	1/1:1,8:10:18.06:331,18,0
chr10	45094181	.	C	CCA	5019.25	PASS	AB=0.705;AC=14;AF=0.250;AN=56;BaseQRankSum=13.587;DP=579;FS=8.859;HRun=0;HaplotypeScore=115.3805;InbreedingCoeff=0.7751;MQ=63.69;MQ0=2;MQRankSum=-3.128;QD=23.90;ReadPosRankSum=0.452;VQSLOD=5.0631;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:50.71:0,51,627	0/0:3,0:3:9:0,9,98	0/0:28,0:21:27.75:0,28,416	0/0:24,0:18:30.53:0,31,282	1/1:6,15:22:47.77:721,48,0	0/0:35,0:35:84.27:0,84,1059	0/0:13,0:13:33.08:0,33,388	1/1:9,14:22:39.12:566,39,0	0/0:12,0:13:38.94:0,39,453	0/0:22,0:22:57.16:0,57,688	0/0:23,0:23:63.19:0,63,780	0/0:7,0:8:17.97:0,18,206	0/0:17,0:17:48.15:0,48,600	0/0:13,0:13:33.09:0,33,402	0/0:10,0:10:23.86:0,24,289	0/0:12,0:12:32.92:0,33,379	0/0:19,0:20:51.12:0,51,611	0/0:12,0:12:30.05:0,30,347	1/1:22,5:27:5.08:268,5,0	1/1:13,11:24:13.09:489,13,0	0/1:19,18:38:11.47:610,0,11	0/0:22,0:22:57.17:0,57,705	0/0:20,0:20:51.16:0,51,637	0/0:27,0:27:72.21:0,72,893	0/0:26,0:26:60.19:0,60,750	0/1:17,8:25:24.43:571,0,24	1/1:3,20:27:27.80:1017,28,0	1/1:6,15:21:35.37:777,35,0
chr10	45094265	.	G	GA	4789.30	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-8.974;DP=565;FS=0.000;HRun=9;HaplotypeScore=80.4789;InbreedingCoeff=0.9028;MQ=66.08;MQ0=3;MQRankSum=-2.329;QD=21.57;ReadPosRankSum=-2.673;VQSLOD=4.3221;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:68.96:0,69,599	0/0:8,0:8:11.97:0,12,104	0/0:13,0:12:16.82:0,17,145	0/0:4,0:4:6.86:0,7,50	1/1:4,14:18:42.11:464,42,0	0/0:26,0:25:30.30:0,30,488	0/0:20,0:20:11.25:0,11,328	1/1:5,20:23:44.87:443,45,0	0/0:16,0:16:38.99:0,39,339	0/0:30,0:30:74.98:0,75,652	0/0:14,0:14:38.97:0,39,334	0/0:20,0:20:50.97:0,51,443	0/0:13,1:13:32.99:0,33,286	0/0:16,0:16:38.99:0,39,339	0/0:21,0:21:50.99:0,51,443	0/0:14,0:14:26.83:0,27,234	1/1:6,9:16:0.85:220,1,0	0/0:16,0:16:41.98:0,42,365	1/1:10,14:21:42.04:431,42,0	1/1:6,32:38:70.16:989,70,0	1/1:9,21:30:56.94:573,57,0	0/0:13,0:13:29.99:0,30,260	0/0:21,0:21:50.98:0,51,443	0/0:21,0:21:59.99:0,60,521	0/0:26,0:26:68.96:0,69,594	1/1:6,21:27:37.09:627,37,0	1/1:10,11:21:1.93:438,2,0	1/1:2,19:21:34.11:604,34,0
chr10	45094321	.	C	CTT	5219.68	PASS	AB=0.778;AC=30;AF=0.536;AN=56;BaseQRankSum=8.990;DP=552;FS=1.565;HRun=9;HaplotypeScore=113.0710;InbreedingCoeff=0.8346;MQ=74.65;MQ0=6;MQRankSum=-2.075;QD=18.71;ReadPosRankSum=-0.120;VQSLOD=3.4041;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:78.15:0,78,821	1/1:1,1:5:13.50:98,13,0	0/0:22,0:21:29.92:0,30,376	0/0:15,0:13:10.39:0,10,154	0/0:20,0:20:57.14:0,57,604	1/1:24,0:23:57.10:567,57,0	0/1:21,0:21:39.88:366,0,40	0/0:36,0:33:66.07:0,66,696	1/1:3,0:14:27.36:95,27,0	1/1:13,21:35:72.22:1066,72,0	1/1:1,17:20:55.99:685,56,0	1/1:2,0:15:27.79:100,28,0	1/1:1,0:12:19.96:69,20,0	0/1:4,0:20:25.46:74,0,25	1/1:3,14:17:30.10:462,30,0	1/1:2,10:11:12.01:160,12,0	0/0:16,0:16:35.57:0,36,370	1/1:6,10:18:30.05:408,30,0	0/0:22,0:20:41.85:0,42,422	0/0:21,0:22:40.59:0,41,462	0/0:24,0:24:69.17:0,69,732	1/1:5,0:17:9.42:120,9,0	1/1:1,0:15:32.44:112,32,0	1/1:1,0:13:29.94:103,30,0	1/1:7,14:21:54.93:735,55,0	0/0:28,1:29:28.95:0,29,720	0/0:22,0:21:57.12:0,57,607	0/0:15,0:15:39.09:0,39,414
chr10	45094327	.	T	TTG	2649.06	PASS	AB=0.934;AC=11;AF=0.196;AN=56;BaseQRankSum=2.323;DP=547;FS=10.308;HRun=0;HaplotypeScore=119.2109;InbreedingCoeff=0.1961;MQ=71.75;MQ0=6;MQRankSum=-1.113;QD=15.67;ReadPosRankSum=3.411;VQSLOD=3.2374;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:81.26:0,81,1171	0/1:6,0:6:4.32:4,0,35	0/0:20,0:19:52.70:0,53,588	0/0:13,0:11:22.52:0,23,279	0/0:20,0:20:57.19:0,57,835	1/1:2,22:23:57.20:995,57,0	0/1:3,17:21:75.64:739,0,76	0/0:36,0:33:87.16:0,87,1138	0/0:13,0:13:27.09:0,27,94	0/1:33,0:33:99:289,0,142	0/1:21,0:21:13.45:214,0,13	0/0:14,0:14:27.11:0,27,108	0/0:16,0:16:28.82:0,29,141	0/0:20,0:20:40.42:0,40,223	1/1:15,0:15:5.73:166,6,0	0/1:14,0:13:36.80:37,0,54	0/0:16,0:16:38.60:0,39,539	0/1:14,0:14:20.42:148,0,20	0/0:20,0:18:51.11:0,51,687	0/0:22,0:22:62.73:0,63,796	0/0:24,0:24:72.23:0,72,1037	0/0:20,0:20:47.69:0,48,259	0/0:18,0:18:39.03:0,39,179	0/0:14,0:14:33.92:0,34,148	0/1:21,0:21:39.82:210,0,40	0/0:29,0:29:65.96:0,66,1110	0/0:21,0:20:60.19:0,60,864	0/0:13,0:13:39.13:0,39,570
chr10	45095007	.	ATG	A	44.81	PASS	AB=0.625;AC=5;AF=0.119;AN=42;BaseQRankSum=2.965;DP=415;FS=4.294;HRun=0;HaplotypeScore=71.7139;InbreedingCoeff=0.5704;MQ=63.23;MQ0=16;MQRankSum=-0.282;QD=4.98;ReadPosRankSum=-3.304;VQSLOD=1.3999;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:34:93.32:0,93,1886	0/0:16,0:16:48.16:0,48,974	0/0:11,0:10:30.10:0,30,555	0/0:15,0:13:33.11:0,33,570	./.	./.	./.	./.	0/0:27,0:27:72.25:0,72,1460	0/0:35,0:32:96.19:0,96,1899	0/0:21,0:21:57.20:0,57,1154	0/0:26,0:25:69.24:0,69,1397	0/0:21,0:18:54.19:0,54,1083	0/0:19,0:18:54.19:0,54,1093	0/0:18,0:16:45.15:0,45,912	0/0:13,0:13:36.12:0,36,730	0/0:26,0:25:75.23:0,75,1480	0/0:20,0:17:48.16:0,48,975	./.	1/1:1,2:2:3.01:45,3,0	1/1:1,0:1:2.99:24,3,0	0/0:26,0:26:75.26:0,75,1515	0/0:27,0:27:81.24:0,81,1530	0/0:17,0:17:42.10:0,42,811	0/0:27,0:26:75.26:0,75,1507	0/1:2,3:4:48.95:77,0,49	./.	./.
chr10	45101316	.	CA	C	304.06	PASS	AC=14;AF=0.280;AN=50;BaseQRankSum=4.382;DP=465;FS=0.000;HRun=1;HaplotypeScore=54.5242;InbreedingCoeff=0.8360;MQ=61.32;MQ0=12;MQRankSum=-1.281;QD=12.67;ReadPosRankSum=-5.013;VQSLOD=0.1778;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:78.27:0,78,1246	0/0:10,0:10:30.10:0,30,463	0/0:22,0:21:63.12:0,63,951	0/0:26,0:23:69.23:0,69,1065	1/1:0,3:3:6.02:75,6,0	./.	1/1:2,1:2:6.02:79,6,0	1/1:4,3:4:11.62:116,12,0	0/0:28,0:28:81.24:0,81,1264	0/0:31,0:31:93.32:0,93,1482	0/0:15,0:15:45.15:0,45,710	0/0:26,0:26:78.26:0,78,1230	0/0:24,0:24:66.18:0,66,1014	0/0:26,0:26:75.26:0,75,1190	0/0:33,0:33:99:0,99,1545	0/0:25,0:25:69.24:0,69,1099	0/0:33,0:30:84.29:0,84,1342	0/0:34,0:34:99:0,102,1589	./.	1/1:1,2:2:6.01:67,6,0	1/1:3,0:2:3.01:37,3,0	0/0:18,0:18:51.17:0,51,785	0/0:17,0:17:45.15:0,45,711	0/0:26,0:24:69.23:0,69,1087	0/0:18,0:17:48.16:0,48,752	1/1:1,2:2:6.02:71,6,0	./.	1/1:2,0:2:2.92:17,3,0
chr10	45101751	.	CTT	C	9669.36	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=17.912;DP=640;FS=6.455;HRun=3;HaplotypeScore=90.0201;InbreedingCoeff=0.9974;MQ=58.28;MQ0=13;MQRankSum=-1.916;QD=39.15;ReadPosRankSum=-0.976;VQSLOD=3.9360;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,114,2031	0/0:8,0:8:24.08:0,24,464	0/0:20,0:8:15.52:0,16,365	0/0:20,0:13:33.08:0,33,512	1/1:0,30:27:66.22:1009,66,0	1/1:0,23:23:69.23:1045,69,0	1/1:0,18:18:51.17:781,51,0	1/1:1,42:40:99:1778,117,0	0/0:22,0:22:63.22:0,63,1209	0/0:20,0:20:57.20:0,57,1068	0/0:23,0:23:63.22:0,63,1192	0/0:18,0:18:54.19:0,54,1019	0/0:22,0:22:66.21:0,66,1230	0/0:24,0:24:69.24:0,69,1332	0/0:20,0:20:57.20:0,57,1069	0/0:31,0:31:93.28:0,93,1700	0/0:24,0:23:69.24:0,69,1318	0/0:15,0:14:45.03:0,45,739	1/1:4,14:11:30.06:415,30,0	1/1:0,25:25:66.22:991,66,0	1/1:2,18:20:51.17:779,51,0	0/0:16,0:16:45.15:0,45,869	0/0:27,0:27:81.27:0,81,1516	0/0:13,0:13:39.13:0,39,740	0/0:32,0:32:96.33:0,96,1839	1/1:0,24:24:69.16:988,69,0	1/1:1,30:31:81.28:1240,81,0	1/1:0,15:15:42.14:643,42,0
chr10	45103083	.	AGAG	A	280.20	PASS	AB=0.560;AC=1;AF=0.018;AN=56;BaseQRankSum=5.321;DP=420;FS=3.421;HRun=0;HaplotypeScore=81.9700;InbreedingCoeff=0.1116;MQ=87.98;MQ0=0;MQRankSum=-5.301;QD=20.01;ReadPosRankSum=1.216;VQSLOD=3.2997;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:72.25:0,72,1657	0/0:7,0:7:21.07:0,21,516	0/0:19,0:19:54.15:0,54,1067	0/0:12,0:12:30.10:0,30,677	0/0:5,0:5:12.04:0,12,265	0/0:15,0:15:42.14:0,42,962	0/0:23,0:23:69.24:0,69,1628	0/0:17,0:17:45.15:0,45,1042	0/0:13,0:13:36.12:0,36,881	0/0:16,0:16:39.13:0,39,873	0/0:8,0:8:21.07:0,21,484	0/0:18,0:18:54.19:0,54,1329	0/0:11,0:11:33.11:0,33,744	0/0:17,0:17:51.17:0,51,1097	0/0:14,0:14:42.14:0,42,940	0/0:10,0:10:30.10:0,30,709	0/1:2,11:13:10.73:355,0,11	0/0:26,0:26:78.27:0,78,1813	0/0:11,0:11:24.08:0,24,539	0/0:10,0:10:30.10:0,30,715	0/0:35,0:35:93.32:0,93,2252	0/0:13,0:13:35.52:0,36,886	0/0:8,0:8:21.07:0,21,515	0/0:38,0:38:99:0,114,2676	0/0:10,0:10:30.10:0,30,699	0/0:8,0:8:21.07:0,21,518	0/0:10,0:10:30.10:0,30,721	0/0:6,0:6:18.06:0,18,412
chr10	45103089	.	ACCACTGCCGCAAC	A	1057.07	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.913;DP=467;FS=6.446;HRun=0;HaplotypeScore=186.0969;InbreedingCoeff=0.9850;MQ=87.67;MQ0=0;MQRankSum=-5.815;QD=81.31;ReadPosRankSum=2.126;VQSLOD=2.7084;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:78.27:0,78,5060	0/0:7,0:7:21.07:0,21,1282	0/0:21,0:21:56:0,56,2895	0/0:13,0:13:39.13:0,39,2191	0/0:9,0:9:24.08:0,24,1249	0/0:18,0:18:54.19:0,54,3019	0/0:22,0:22:66.23:0,66,3491	0/0:21,0:21:63.22:0,63,3310	0/0:15,0:15:45.13:0,45,2575	0/0:18,0:18:54.19:0,54,2976	0/0:8,0:8:21.07:0,21,1286	0/0:18,0:18:54.19:0,54,3387	0/0:11,0:11:33.11:0,33,2226	0/0:18,0:18:54.19:0,54,3150	0/0:14,0:14:42.14:0,42,2578	0/0:10,0:10:30.10:0,30,1930	1/1:2,11:13:36.12:1152,36,0	0/0:26,0:26:75.26:0,75,4806	0/0:19,0:19:57.20:0,57,2967	0/0:12,0:12:36.12:0,36,2343	0/0:46,0:46:99:0,129,7133	0/0:14,0:14:39.13:0,39,2456	0/0:8,0:8:24.07:0,24,1167	0/0:37,0:37:99:0,111,7121	0/0:9,0:9:27.09:0,27,1582	0/0:12,0:12:36.12:0,36,2141	0/0:10,0:10:30.10:0,30,2034	0/0:11,0:11:33.11:0,33,2035
chr10	45103104	.	A	AG	246.83	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.978;DP=532;FS=7.936;HRun=0;HaplotypeScore=85.7760;InbreedingCoeff=0.9899;MQ=81.21;MQ0=1;MQRankSum=-5.756;QD=12.99;ReadPosRankSum=2.197;VQSLOD=4.2497;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,117,1587	0/0:7,0:7:21.07:0,21,291	0/0:17,0:17:51.06:0,51,670	0/0:13,0:13:39.13:0,39,545	0/0:17,0:17:42.13:0,42,573	0/0:19,0:19:57.16:0,57,761	0/0:22,0:22:63.21:0,63,879	0/0:20,0:20:57.16:0,57,763	0/0:14,0:14:42.14:0,42,587	0/0:24,0:24:69.18:0,69,941	0/0:9,0:9:23.80:0,24,316	0/0:17,0:17:51.17:0,51,713	0/0:13,0:13:39.12:0,39,527	0/0:18,0:18:54.18:0,54,755	0/0:14,0:14:39.13:0,39,545	0/0:11,0:11:33.11:0,33,461	1/1:13,6:17:39.63:342,40,0	0/0:24,0:24:69.23:0,69,960	0/0:26,0:26:75.14:0,75,1021	0/0:15,0:15:45.15:0,45,629	0/0:54,0:54:99:0,147,1968	0/0:17,0:17:45.09:0,45,605	0/0:11,0:11:27.05:0,27,355	0/0:39,0:39:99:0,114,1532	0/0:8,0:8:24.06:0,24,317	0/0:19,0:19:54.18:0,54,749	0/0:13,0:13:39.12:0,39,530	0/0:11,0:11:33.07:0,33,423
chr10	45103718	.	C	CAATGAATG	15991.34	PASS	AB=0.687;AC=41;AF=0.759;AN=54;BaseQRankSum=-2.379;DP=775;FS=8.977;HRun=0;HaplotypeScore=199.7337;InbreedingCoeff=0.6399;MQ=63.28;MQ0=6;MQRankSum=-2.843;QD=24.75;ReadPosRankSum=-0.445;VQSLOD=3.2656;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:63.16:0,63,1431	1/1:5,0:10:14.97:122,15,0	./.	0/0:17,0:13:8.98:0,9,124	1/1:24,8:34:42.14:1551,42,0	0/0:12,0:23:24.08:0,24,447	0/0:6,0:19:33.09:0,33,544	1/1:33,0:32:9.03:205,9,0	1/1:15,0:30:38.91:318,39,0	0/1:28,15:46:10.67:2145,0,11	1/1:8,0:16:17.96:147,18,0	0/1:19,0:34:33.35:262,0,33	1/1:13,0:27:41.91:343,42,0	0/1:15,0:33:26.98:318,0,27	1/1:22,14:37:42.13:1492,42,0	1/1:14,5:23:17.89:625,18,0	0/0:12,0:23:30.07:0,30,493	1/1:13,1:14:12.04:467,12,0	1/1:22,0:18:13.85:312,14,0	1/1:31,0:45:54.19:1812,54,0	1/1:14,0:18:6.02:208,6,0	1/1:17,10:34:57.02:1275,57,0	1/1:14,0:32:46.23:365,46,0	1/1:14,0:39:56.87:465,57,0	1/1:21,5:27:12.04:490,12,0	1/1:21,0:31:51.17:1451,51,0	1/1:34,0:40:36.12:1264,36,0	1/1:13,2:16:12.04:354,12,0
chr10	45105125	.	TTTTGTTTGTTTG	T	2388.14	PASS	AB=0.605;AC=3;AF=0.054;AN=56;BaseQRankSum=7.725;DP=702;FS=0.793;HRun=0;HaplotypeScore=222.5814;InbreedingCoeff=0.6460;MQ=58.92;MQ0=3;MQRankSum=-7.500;QD=45.93;ReadPosRankSum=0.593;VQSLOD=3.3719;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:72.23:0,72,3545	0/0:18,0:18:45.15:0,45,2288	0/0:28,0:23:21.07:0,21,716	0/0:39,0:26:48.11:0,48,1977	0/0:24,0:24:57.20:0,57,3203	1/1:11,18:28:42.14:1474,42,0	0/1:8,15:23:27.02:1021,0,27	0/0:23,0:23:35.91:0,36,1354	0/0:30,0:30:60.19:0,60,2788	0/0:24,0:24:57.20:0,57,3004	0/0:24,0:24:63.19:0,63,3263	0/0:20,0:20:42.13:0,42,1976	0/0:26,0:26:66.21:0,66,3326	0/0:17,0:17:39.13:0,39,2138	0/0:23,0:23:66.21:0,66,3076	0/0:27,0:27:57.20:0,57,2864	0/0:23,0:34:44.98:0,45,1710	0/0:25,0:25:60.16:0,60,3217	0/0:20,0:18:27.95:0,28,1154	0/0:21,0:21:39.13:0,39,2121	0/0:32,0:32:84.29:0,84,4348	0/0:35,0:35:84.29:0,84,4513	0/0:19,0:19:39.02:0,39,1772	0/0:31,0:31:90.31:0,90,4855	0/0:14,0:14:39.12:0,39,1851	0/0:20,0:20:45.15:0,45,2403	0/0:25,0:25:51.15:0,51,2605	0/0:13,0:13:30.06:0,30,1458
chr10	45105825	.	G	GAAGAAAGA	3987.61	PASS	AB=0.954;AC=41;AF=0.788;AN=52;BaseQRankSum=-6.459;DP=600;FS=11.261;HRun=0;HaplotypeScore=177.6789;InbreedingCoeff=0.0101;MQ=56.52;MQ0=11;MQRankSum=-1.128;QD=7.38;ReadPosRankSum=-3.662;VQSLOD=1.1142;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:21,0:22:20.45:20,0,173	1/1:14,0:13:9.02:118,9,0	./.	./.	1/1:18,12:30:24.45:644,24,0	0/1:11,0:21:38.18:49,0,38	1/1:24,0:20:6.37:42,6,0	0/0:21,0:17:2.88:0,3,15	1/1:16,0:16:23.15:268,23,0	0/1:20,0:18:46.95:47,0,138	0/1:27,0:27:35.14:35,0,190	1/1:15,0:15:3.82:28,4,0	1/1:20,0:20:11.21:96,11,0	1/1:22,0:21:15.84:212,16,0	0/1:27,0:27:20.62:21,0,211	0/1:18,0:18:41.38:41,0,235	1/1:20,8:34:3.01:74,3,0	0/1:30,0:29:26.22:26,0,247	1/1:11,1:12:9.03:274,9,0	1/1:28,0:27:35.57:508,36,0	1/1:4,6:11:3.01:58,3,0	1/1:23,0:23:32.09:334,32,0	1/1:29,0:27:16.90:334,17,0	1/1:25,0:25:2.45:126,2,0	0/0:19,0:19:13.79:0,14,135	1/1:28,0:26:34.49:475,34,0	1/1:12,13:25:4.37:125,4,0	1/1:16,0:17:10.55:32,11,0
chr10	45105856	.	GAA	G	791.30	PASS	AB=0.826;AC=6;AF=0.111;AN=54;BaseQRankSum=2.527;DP=544;FS=12.245;HRun=3;HaplotypeScore=123.0823;InbreedingCoeff=-0.1337;MQ=50.97;MQ0=20;MQRankSum=2.333;QD=6.04;ReadPosRankSum=4.168;VQSLOD=-0.7064;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:23:51.64:0,52,685	0/0:9,0:8:23.95:0,24,275	0/0:1,0:1:3.01:0,3,42	./.	0/0:28,0:28:63.20:0,63,954	0/0:18,0:18:24.08:0,24,375	0/0:21,0:17:42.60:0,43,655	0/0:20,0:11:30.09:0,30,403	0/0:20,0:20:53.99:0,54,740	0/1:14,3:15:58.32:171,0,58	0/1:17,3:21:99:151,0,113	0/0:13,0:13:32.96:0,33,418	0/0:16,0:16:48:0,48,655	0/0:19,0:18:48.05:0,48,709	0/1:22,5:27:99:156,0,131	0/1:17,4:21:99:150,0,147	0/0:28,0:28:33.07:0,33,478	0/1:16,7:23:99:180,0,152	0/0:15,0:10:30.10:0,30,458	0/0:25,0:24:66.18:0,66,1067	0/0:14,0:13:18.05:0,18,268	0/0:20,0:20:60.16:0,60,1000	0/0:27,0:25:75.14:0,75,1186	0/0:20,0:20:49.56:0,50,560	0/1:17,5:22:99:106,0,228	0/0:28,0:26:78.13:0,78,1312	0/0:27,0:27:45.13:0,45,661	0/0:20,0:19:21.07:0,21,360
chr10	45105871	.	A	AGAAG	2761.58	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=-7.782;DP=561;FS=8.156;HRun=0;HaplotypeScore=138.4919;InbreedingCoeff=0.7229;MQ=52.13;MQ0=15;MQRankSum=1.360;QD=11.90;ReadPosRankSum=-1.659;VQSLOD=2.4355;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:24:50.68:0,51,427	0/0:10,0:9:26.88:0,27,213	0/0:7,0:5:14.94:0,15,140	0/0:4,0:2:6.01:0,6,61	1/1:28,0:28:59.38:484,59,0	0/1:17,0:17:67.02:67,0,101	0/0:19,0:16:12.68:0,13,217	1/1:23,0:18:5.15:261,5,0	0/0:20,0:20:13.59:0,14,278	0/0:15,0:13:35.60:0,36,357	0/0:17,0:17:23.30:0,23,258	0/0:11,0:11:26.78:0,27,218	0/0:18,0:18:47.66:0,48,367	0/0:18,0:17:6.23:0,6,236	0/0:26,0:26:56.64:0,57,534	0/0:19,0:19:55.30:0,55,498	1/1:27,0:27:33.62:284,34,0	0/0:22,0:22:47.12:0,47,425	0/1:14,0:13:1.07:195,0,1	1/1:23,0:23:36.45:251,36,0	1/1:16,0:15:26.91:218,27,0	0/0:23,0:23:38.67:0,39,292	0/0:27,0:25:66.38:0,66,497	0/0:22,0:22:44.03:0,44,377	0/0:25,0:25:69.50:0,70,568	0/1:28,0:26:99:389,0,121	1/1:30,0:30:51.72:427,52,0	1/1:2,21:23:15.05:380,15,0
chr10	45106208	.	TCTCTCTCTCTCTC	T	784.99	PASS	AB=1.000;AC=19;AF=0.380;AN=50;BaseQRankSum=-4.237;DP=443;FS=9.728;HRun=0;HaplotypeScore=114.4285;InbreedingCoeff=0.0371;MQ=37.82;MQ0=66;MQRankSum=0.161;QD=3.74;ReadPosRankSum=-1.239;VQSLOD=1.1282;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:25:27.05:0,27,849	0/1:10,0:10:2.17:13,0,2	0/0:28,0:3:6.02:0,6,158	0/0:33,0:4:3.01:0,3,66	1/1:18,0:18:9.03:115,9,0	1/1:12,2:11:5.31:57,5,0	0/0:8,7:11:0.94:0,1,2	0/1:25,0:23:80.66:100,0,81	0/1:12,0:10:96.43:96,0,110	1/1:5,0:4:3.01:92,3,0	./.	0/0:17,0:14:16.40:0,16,520	0/1:13,0:9:16.82:17,0,178	0/0:13,0:11:5.03:0,5,404	./.	0/1:11,0:10:30.35:30,0,73	0/0:13,0:11:3.01:0,3,126	./.	0/1:14,0:11:99:119,0,103	1/1:20,0:19:0.94:3,1,0	0/1:15,0:11:0:0,0,0	0/0:14,0:12:3.48:0,3,108	0/0:18,0:17:0.47:0,0,1	0/1:27,0:15:25.65:26,0,164	1/1:8,0:6:3.01:91,3,0	0/1:18,0:16:99:165,0,372	0/0:12,0:12:3.48:0,3,93	0/0:24,0:21:13.74:0,14,525
chr10	45106210	.	TCTCTCTCTCTC	T	987.99	PASS	AB=1.000;AC=21;AF=0.420;AN=50;BaseQRankSum=-3.261;DP=436;FS=13.410;HRun=0;HaplotypeScore=105.6936;InbreedingCoeff=0.0174;MQ=36.71;MQ0=67;MQRankSum=-0.782;QD=4.51;ReadPosRankSum=-4.868;VQSLOD=-0.5565;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:25:27.05:0,27,723	1/1:9,1:10:5.29:48,5,0	0/0:28,0:3:6.02:0,6,134	0/0:34,0:4:3.01:0,3,45	1/1:17,0:17:9.03:115,9,0	1/1:12,2:11:5.61:57,6,0	0/0:15,1:11:0.94:0,1,2	0/1:23,0:21:32.72:189,0,33	0/1:12,0:10:69.46:101,0,69	1/1:5,0:4:3.01:78,3,0	./.	0/0:17,0:14:16.33:0,16,389	0/1:14,0:8:44.85:45,0,125	0/1:14,0:12:11.70:12,0,303	./.	0/1:10,0:9:15.41:15,0,47	0/0:15,0:13:0.76:0,1,98	./.	0/1:13,0:11:77.12:124,0,77	1/1:19,0:18:1.36:3,1,0	0/1:14,0:10:0.48:0,0,0	0/0:15,0:12:3.48:0,3,83	0/0:17,0:16:0.47:0,0,1	0/1:28,0:16:25.86:26,0,87	1/1:7,0:5:3.01:77,3,0	0/1:19,0:18:99:237,0,295	0/0:12,0:12:3.48:0,3,73	0/0:19,0:16:14.35:0,14,418
chr10	45106216	.	TCTCTCCTCTCTCTCTCTCTCTCTCTCA	T	546.78	PASS	AB=0.975;AC=10;AF=0.185;AN=54;BaseQRankSum=0.945;DP=418;FS=4.615;HRun=0;HaplotypeScore=144.7074;InbreedingCoeff=0.2893;MQ=34.03;MQ0=74;MQRankSum=-2.201;QD=8.28;ReadPosRankSum=-1.747;VQSLOD=2.3553;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:26:30.10:0,30,2062	0/0:9,0:9:6.91:0,7,208	0/0:32,0:2:6.02:0,6,304	0/0:38,0:2:6.02:0,6,240	0/0:13,0:13:8.72:0,9,283	0/0:12,0:10:7.37:0,7,151	0/0:16,0:11:4.78:0,5,40	0/0:17,0:16:44.96:0,45,901	0/1:14,0:11:20.68:21,0,576	1/1:1,2:2:3.01:208,3,0	./.	0/0:17,0:14:20.72:0,21,1375	0/1:15,0:9:0.15:0,0,763	0/0:12,0:10:18.92:0,19,1144	0/0:7,0:6:1.25:0,1,3	0/1:8,1:8:99:156,0,221	0/1:14,0:12:7.88:8,0,353	1/1:4,0:3:8.98:88,9,0	0/0:11,0:9:21.23:0,21,579	0/0:14,0:13:4.39:0,4,29	0/0:12,0:7:0.47:0,0,1	0/0:14,0:11:6.89:0,7,284	0/0:16,0:14:1.36:0,1,3	0/0:27,0:14:15.40:0,15,745	1/1:5,2:5:3.01:192,3,0	0/0:19,0:18:44.27:0,44,1558	0/0:13,0:13:4.26:0,4,211	0/0:14,0:11:15.05:0,15,1199
chr10	45106218	.	TCTC	T	1860.70	PASS	AB=0.912;AC=40;AF=0.741;AN=54;BaseQRankSum=-0.469;DP=393;FS=2.376;HRun=0;HaplotypeScore=68.6295;InbreedingCoeff=0.3657;MQ=33.28;MQ0=73;MQRankSum=-1.195;QD=6.46;ReadPosRankSum=-1.609;VQSLOD=2.1477;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:25:26.64:0,27,373	1/1:9,0:9:5.85:75,6,0	0/0:32,0:2:6.01:0,6,69	0/0:37,0:1:3.01:0,3,40	1/1:13,0:13:9.03:115,9,0	1/1:12,0:10:5.81:58,6,0	0/1:15,0:10:0:0,0,0	0/1:14,0:13:14.88:249,0,15	1/1:14,0:11:14.99:168,15,0	1/1:3,0:2:2.98:22,3,0	./.	1/1:16,0:13:14.08:122,14,0	1/1:15,0:9:17.87:188,18,0	1/1:10,1:9:14.30:114,14,0	0/0:5,0:4:0:0,0,0	1/1:5,0:4:5.98:68,6,0	0/1:14,0:12:0.26:1,0,0	1/1:5,0:3:6.02:76,6,0	1/1:11,0:9:19.76:199,20,0	1/1:13,0:12:2.60:10,3,0	0/1:10,0:5:0:1,0,0	1/1:14,0:11:2.76:17,3,0	0/1:2,13:13:0:0,0,0	1/1:26,1:14:11.99:166,12,0	1/1:7,0:5:2.98:21,3,0	1/1:17,0:16:9.67:288,10,0	1/1:13,0:13:2.50:9,2,0	0/1:13,1:11:8.67:25,0,9
chr10	45106220	.	TC	T	2234.88	PASS	AB=0.698;AC=40;AF=0.833;AN=48;BaseQRankSum=0.643;DP=385;FS=1.164;HRun=2;HaplotypeScore=63.0920;InbreedingCoeff=0.4203;MQ=32.68;MQ0=75;MQRankSum=-1.479;QD=8.94;ReadPosRankSum=-0.016;VQSLOD=1.0579;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,2:24:26.41:0,26,335	1/1:9,0:9:6.02:76,6,0	0/0:32,0:2:6.01:0,6,69	0/0:37,0:1:3.01:0,3,40	1/1:4,8:12:9.03:115,9,0	1/1:7,5:10:5.98:58,6,0	./.	0/1:8,7:13:14.37:263,0,14	1/1:5,9:11:15.05:188,15,0	1/1:5,0:3:5.35:29,5,0	./.	1/1:1,14:12:15.03:182,15,0	1/1:5,10:9:18.01:199,18,0	1/1:3,8:9:15.04:193,15,0	./.	1/1:4,1:4:5.98:56,6,0	1/1:8,3:9:4.22:25,4,0	1/1:3,2:3:6.02:76,6,0	1/1:5,5:8:19.60:219,20,0	1/1:12,0:11:2.60:11,3,0	0/1:6,4:5:0:1,0,0	1/1:2,11:10:3.01:39,3,0	./.	1/1:4,22:13:11.61:112,12,0	1/1:4,3:5:2.22:7,2,0	1/1:16,0:15:34.48:367,34,0	1/1:13,0:13:3.48:29,3,0	1/1:13,1:11:14.05:120,14,0
chr10	45106221	.	C	CT	2339.55	PASS	AB=0.958;AC=44;AF=0.815;AN=54;BaseQRankSum=0.661;DP=401;FS=5.863;HRun=1;HaplotypeScore=79.7426;InbreedingCoeff=0.4146;MQ=32.35;MQ0=74;MQRankSum=-0.585;QD=7.77;ReadPosRankSum=-0.423;VQSLOD=0.4535;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:22:27.02:0,27,344	1/1:9,0:9:6.02:77,6,0	0/0:32,0:2:6.01:0,6,68	0/0:36,0:1:3.01:0,3,40	1/1:10,0:10:9.03:115,9,0	1/1:12,0:10:5.98:58,6,0	0/1:13,1:9:0:0,0,0	0/1:11,0:10:16.02:261,0,16	1/1:14,0:11:14.91:164,15,0	1/1:12,0:9:13.75:152,14,0	./.	1/1:17,0:14:13.93:76,14,0	1/1:15,1:10:15.40:156,15,0	1/1:10,1:9:14.70:124,15,0	1/1:8,0:7:6:61,6,0	1/1:8,0:8:9.32:71,9,0	1/1:4,7:9:4.26:50,4,0	1/1:6,0:3:6.02:76,6,0	1/1:8,0:6:18.05:215,18,0	1/1:2,10:11:2.68:11,3,0	0/1:8,1:4:0:1,0,0	1/1:15,0:12:2.88:15,3,0	0/1:15,0:13:0:0,0,0	1/1:26,0:13:6.37:47,6,0	1/1:12,0:10:1.19:22,1,0	1/1:2,13:13:34.91:434,35,0	1/1:1,13:14:3.48:48,3,0	1/1:4,10:11:15.05:236,15,0
chr10	45106241	.	TCACA	T	216.50	PASS	AB=1.000;AC=21;AF=0.420;AN=50;BaseQRankSum=3.282;DP=384;FS=0.000;HRun=0;HaplotypeScore=116.8526;InbreedingCoeff=0.3014;MQ=31.51;MQ0=59;MQRankSum=-0.550;QD=1.07;ReadPosRankSum=-3.297;VQSLOD=0.8309;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,16:22:3.01:48,3,0	0/0:6,0:6:0.47:0,0,1	./.	./.	0/0:6,0:6:0:0,0,0	0/0:17,0:17:0.47:0,0,1	./.	0/0:22,0:19:32.10:0,32,316	1/1:10,0:8:0.14:11,0,0	0/1:15,0:11:13.86:14,0,129	0/0:9,0:8:0:0,0,0	1/1:18,0:16:8.78:56,9,0	0/1:17,0:13:43.60:44,0,46	1/1:15,0:13:1.70:11,2,0	0/0:11,0:10:0.47:0,0,1	1/1:12,0:11:6.82:24,7,0	1/1:12,0:12:12.90:90,13,0	0/1:6,0:4:4.20:4,0,37	0/0:4,0:3:5.81:0,6,58	0/0:14,0:12:0:0,0,0	0/1:10,0:7:0.26:0,0,0	0/1:15,0:13:0:0,0,0	0/1:18,0:16:0:0,0,0	0/0:24,0:13:3.94:0,4,25	1/1:15,0:11:3.01:34,3,0	0/0:13,0:10:13.93:0,14,87	0/1:9,0:8:1.93:4,0,2	0/0:11,0:8:8.63:0,9,61
chr10	45106271	.	ACACACGCGCG	A	3500.61	PASS	AB=0.993;AC=33;AF=0.635;AN=52;BaseQRankSum=4.707;DP=398;FS=2.471;HRun=0;HaplotypeScore=148.9190;InbreedingCoeff=0.0646;MQ=40.26;MQ0=23;MQRankSum=0.141;QD=10.97;ReadPosRankSum=2.814;VQSLOD=2.8090;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:24:18.06:0,18,409	0/0:7,0:7:6.49:0,6,120	0/0:3,0:2:3.48:0,3,84	0/0:3,0:1:3.01:0,3,39	./.	1/1:21,0:20:5.87:98,6,0	1/1:11,0:9:3.01:47,3,0	0/1:25,0:23:99:308,0,295	1/1:8,0:8:14.98:208,15,0	0/1:21,0:18:99:378,0,120	1/1:10,0:9:2.65:51,3,0	1/1:13,0:13:5.06:120,5,0	0/1:14,0:13:69.09:110,0,69	1/1:15,0:14:8.19:111,8,0	0/1:15,1:15:0.02:1,0,0	1/1:11,0:11:12.04:223,12,0	1/1:17,0:16:20.82:299,21,0	0/1:9,0:7:47.84:171,0,48	0/1:12,0:10:30.82:175,0,31	./.	0/0:14,0:12:0.36:0,1,0	1/1:13,0:12:0.36:1,0,0	1/1:18,0:18:9.03:191,9,0	0/1:28,0:21:5.92:332,0,6	1/1:15,9:20:3.01:99,3,0	0/1:13,0:11:33.95:258,0,34	1/1:9,0:8:15.05:277,15,0	0/1:10,0:9:41.22:45,0,41
chr10	45106273	.	ACACGCGCG	A	3911.53	PASS	AB=0.891;AC=38;AF=0.731;AN=52;BaseQRankSum=4.556;DP=390;FS=1.692;HRun=0;HaplotypeScore=139.6055;InbreedingCoeff=0.2353;MQ=44.52;MQ0=22;MQRankSum=-0.891;QD=12.19;ReadPosRankSum=4.326;VQSLOD=2.4860;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:26:24.08:0,24,520	0/0:7,0:7:6.02:0,6,120	0/0:3,0:2:3.01:0,3,84	0/0:5,0:3:2.98:0,3,39	./.	1/1:20,0:19:5.87:103,6,0	1/1:10,0:8:3.01:47,3,0	0/1:24,0:22:91.41:327,0,91	1/1:8,0:8:15.05:272,15,0	0/1:10,10:18:22.01:435,0,22	1/1:4,5:8:2.62:51,3,0	1/1:12,0:13:14.99:196,15,0	0/1:14,0:13:10.49:222,0,10	1/1:14,0:13:8.54:154,9,0	0/1:8,7:14:0:1,0,0	1/1:5,6:11:12.04:279,12,0	1/1:19,0:17:19.32:274,19,0	1/1:8,1:7:3.62:199,4,0	0/1:11,0:10:7.87:197,0,8	./.	1/1:13,0:11:0.37:1,0,0	1/1:13,0:12:0.36:0,0,0	1/1:18,0:18:9.03:191,9,0	1/1:27,0:20:20.53:397,21,0	1/1:23,1:20:3.01:75,3,0	1/1:12,0:10:1:215,1,0	1/1:8,0:8:15.05:245,15,0	0/1:8,0:7:3.11:32,0,3
chr10	45106275	.	ACGCGCGCGCG	A	2689.54	PASS	AB=0.762;AC=37;AF=0.661;AN=56;BaseQRankSum=1.510;DP=388;FS=3.835;HRun=0;HaplotypeScore=150.3846;InbreedingCoeff=0.1648;MQ=48.35;MQ0=20;MQRankSum=-1.224;QD=8.20;ReadPosRankSum=0.406;VQSLOD=2.2186;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:26:24.08:0,24,903	0/0:7,0:7:6.02:0,6,199	0/0:3,0:2:3.01:0,3,94	0/0:8,0:5:6.07:0,6,73	0/1:2,7:9:0:0,0,0	1/1:14,0:19:5.87:171,6,0	1/1:7,0:8:3.01:81,3,0	1/1:15,7:20:18.28:640,18,0	0/1:4,0:8:6.70:61,0,7	0/1:20,0:18:99:109,0,113	1/1:9,0:8:2.54:15,3,0	0/1:6,0:12:35.88:36,0,66	0/0:6,0:13:0.89:0,1,121	0/1:7,0:13:5.54:6,0,23	1/1:15,0:14:0.93:2,1,0	1/1:9,0:11:11.89:99,12,0	0/1:19,0:17:41.21:41,0,115	0/1:6,0:6:50.84:51,0,65	1/1:6,5:11:17.14:408,17,0	0/1:10,7:16:0:0,0,0	1/1:10,3:11:0.28:0,1,0	1/1:8,0:12:0.36:1,0,0	1/1:11,0:18:8.67:53,9,0	0/1:19,0:19:16.59:75,0,17	1/1:22,0:20:3.01:71,3,0	1/1:7,5:10:17.69:404,18,0	1/1:5,4:8:15.05:421,15,0	1/1:5,3:7:3.01:94,3,0
chr10	45106410	.	T	TCC	7582.72	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-13.983;DP=607;FS=4.826;HRun=4;HaplotypeScore=70.3633;InbreedingCoeff=0.9967;MQ=74.54;MQ0=0;MQRankSum=0.094;QD=44.09;ReadPosRankSum=0.370;VQSLOD=3.9489;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:47:99:0,138,1820	0/0:11,0:11:33.08:0,33,420	0/0:17,0:17:18.64:0,19,484	0/0:14,0:14:35.97:0,36,416	1/1:0,27:27:75.16:1313,75,0	0/0:21,0:21:60.01:0,60,738	0/0:21,0:21:57.13:0,57,724	1/1:2,19:21:54.19:964,54,0	0/0:17,0:17:42.12:0,42,545	0/0:25,0:25:66.20:0,66,864	0/0:22,0:22:63.17:0,63,821	0/0:19,0:19:54.18:0,54,720	0/0:13,0:13:39.13:0,39,520	0/0:26,0:26:78.13:0,78,953	0/0:16,0:16:45.15:0,45,598	0/0:15,0:15:39.11:0,39,505	0/0:32,0:32:90.27:0,90,1182	0/0:25,0:25:72.22:0,72,944	1/1:2,13:16:42.13:727,42,0	1/1:1,13:14:36.12:646,36,0	1/1:2,33:37:87.30:1564,87,0	0/0:19,0:19:57.17:0,57,744	0/0:17,0:17:48.12:0,48,607	0/0:34,0:34:96.24:0,96,1228	0/0:23,0:23:60.14:0,60,765	1/1:1,19:20:17.16:912,17,0	1/1:1,22:23:57.20:1025,57,0	1/1:3,10:13:24.08:432,24,0
chr10	45107558	.	C	CCT	3225.28	PASS	AB=0.610;AC=13;AF=0.232;AN=56;BaseQRankSum=-6.053;DP=627;FS=2.194;HRun=0;HaplotypeScore=86.6190;InbreedingCoeff=0.7335;MQ=66.79;MQ0=11;MQRankSum=1.778;QD=21.08;ReadPosRankSum=1.101;VQSLOD=4.1408;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:28:50.90:0,51,570	0/0:13,0:13:36.11:0,36,431	0/0:49,0:27:31.49:0,31,393	0/0:74,0:33:36.52:0,37,386	0/0:12,0:13:20.63:0,21,229	1/1:3,14:17:35.15:534,35,0	1/1:6,1:16:24.04:294,24,0	0/0:23,0:23:23.57:0,24,287	0/0:13,0:13:33.10:0,33,396	1/1:8,18:26:47.89:701,48,0	0/1:4,8:13:14.91:266,0,15	0/0:16,0:16:45.11:0,45,525	0/0:22,0:22:51.16:0,51,611	0/0:25,0:26:53.98:0,54,614	1/1:4,26:31:45.15:719,45,0	0/1:7,12:19:1.53:447,0,2	0/0:23,0:23:48.05:0,48,534	1/1:3,13:16:27.06:406,27,0	0/0:21,0:21:27.08:0,27,321	0/0:17,0:17:30.08:0,30,343	0/0:30,0:30:45.89:0,46,655	0/0:8,0:8:3.01:0,3,36	0/0:12,0:12:21.05:0,21,234	0/0:17,0:17:39.09:0,39,444	0/1:5,9:15:8.12:42,0,8	0/0:19,0:20:41.95:0,42,470	0/0:33,0:33:60.13:0,60,692	0/0:15,0:14:29.43:0,29,317
chr10	45109679	.	GT	G	4088.97	PASS	AB=0.558;AC=11;AF=0.196;AN=56;BaseQRankSum=10.819;DP=749;FS=2.085;HRun=5;HaplotypeScore=73.3563;InbreedingCoeff=0.8916;MQ=58.90;MQ0=9;MQRankSum=4.270;QD=28.01;ReadPosRankSum=2.545;VQSLOD=4.0871;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,162,2125	0/0:15,0:13:33.11:0,33,451	0/0:30,0:21:51.04:0,51,572	0/0:21,0:13:35.78:0,36,434	0/0:26,0:25:33.67:0,34,679	0/0:20,0:20:54.17:0,54,722	0/0:20,0:20:51.17:0,51,698	0/0:30,0:30:78.22:0,78,1021	0/0:32,0:32:96.31:0,96,1297	0/1:5,19:23:13.66:592,0,14	1/1:3,12:15:30.09:340,30,0	0/0:22,0:22:66.21:0,66,887	0/0:33,0:33:81.20:0,81,1056	0/0:24,0:24:72.22:0,72,956	1/1:1,25:26:66.19:749,66,0	1/1:1,31:32:87.25:987,87,0	0/0:28,0:27:75.17:0,75,971	1/1:0,17:17:48.14:544,48,0	0/0:24,0:24:63.18:0,63,828	0/0:26,0:23:57.12:0,57,738	0/0:29,0:29:81.22:0,81,1071	0/0:22,0:22:57.12:0,57,739	0/0:26,0:26:69.17:0,69,893	0/0:35,0:35:99:0,102,1378	1/1:3,29:30:43.30:877,43,0	0/0:40,1:40:77.25:0,77,1364	0/0:30,0:30:84.25:0,84,1100	0/0:14,0:14:42.14:0,42,574
chr10	45110248	.	AT	A	393.58	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.684;DP=466;FS=0.976;HRun=7;HaplotypeScore=49.5770;InbreedingCoeff=0.9103;MQ=73.23;MQ0=0;MQRankSum=0.551;QD=19.68;ReadPosRankSum=0.471;VQSLOD=3.0306;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,17:20:48.10:488,48,0	0/0:3,0:3:9.03:0,9,113	0/0:11,0:11:25.97:0,26,294	0/0:8,0:8:11.76:0,12,104	0/0:21,0:21:57.18:0,57,715	0/0:24,0:24:69.21:0,69,856	0/0:13,0:13:39.11:0,39,467	0/0:23,0:23:63.19:0,63,770	0/0:16,0:16:45.13:0,45,553	0/0:25,0:25:72.22:0,72,895	0/0:21,0:21:63.20:0,63,793	0/0:13,0:13:39.11:0,39,478	0/0:12,0:12:30.10:0,30,377	0/0:18,0:18:51.13:0,51,605	0/0:16,0:16:45.13:0,45,544	0/0:15,0:15:42.13:0,42,528	0/0:17,0:17:48.12:0,48,575	0/0:12,0:12:30.04:0,30,346	0/0:28,0:28:75.21:0,75,915	0/0:18,0:18:54.15:0,54,653	0/0:11,0:11:21.05:0,21,250	0/0:15,0:15:45.13:0,45,553	0/0:18,0:18:48.13:0,48,604	0/0:9,0:9:27.04:0,27,288	0/0:20,0:20:57.17:0,57,704	0/0:24,0:24:69.15:0,69,848	0/0:23,0:22:51.16:0,51,641	0/0:12,0:12:36.12:0,36,453
chr10	45110587	.	G	GT	2235.30	PASS	AB=0.828;AC=13;AF=0.232;AN=56;BaseQRankSum=-8.798;DP=437;FS=0.000;HRun=9;HaplotypeScore=47.8354;InbreedingCoeff=0.7243;MQ=79.06;MQ0=3;MQRankSum=1.713;QD=15.85;ReadPosRankSum=0.707;VQSLOD=3.3051;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:2,0:28:46.13:0,46,136	0/0:4,0:4:12:0,12,104	0/1:22,0:14:9.11:9,0,87	0/0:23,0:17:19.61:0,20,134	0/0:16,0:16:38.98:0,39,338	0/0:20,0:20:53.99:0,54,469	0/0:9,0:9:26.97:0,27,229	0/0:30,0:29:59.96:0,60,521	0/0:17,0:17:50.99:0,51,443	1/1:4,13:17:39.11:431,39,0	1/1:2,15:17:42.11:465,42,0	0/0:4,0:4:8.99:0,9,78	0/0:10,0:10:23.99:0,24,208	0/0:9,0:9:26.99:0,27,234	1/1:1,16:17:45.12:498,45,0	0/1:3,8:11:2:194,0,2	0/0:15,0:15:35.98:0,36,312	1/1:3,11:14:27.54:299,28,0	0/0:14,0:14:38.99:0,39,339	0/0:14,0:14:38.21:0,38,319	0/0:5,0:5:15:0,15,130	0/0:9,0:9:23.99:0,24,208	0/0:4,0:4:9:0,9,78	0/0:13,0:13:35.99:0,36,312	1/1:5,19:23:45.12:498,45,0	0/1:17,2:19:24.39:24,0,271	0/0:25,0:25:53.96:0,54,469	0/0:26,0:26:65.95:0,66,573
chr10	45112420	.	G	GT	5164.79	PASS	AB=0.587;AC=15;AF=0.268;AN=56;BaseQRankSum=16.184;DP=674;FS=1.974;HRun=1;HaplotypeScore=88.0600;InbreedingCoeff=0.9157;MQ=57.05;MQ0=7;MQRankSum=-0.493;QD=26.76;ReadPosRankSum=0.176;VQSLOD=4.6823;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:51.17:0,51,658	0/0:7,0:7:21.07:0,21,273	0/0:17,0:13:33.06:0,33,391	0/0:16,0:11:30.03:0,30,356	1/1:2,24:25:54.08:745,54,0	0/0:37,0:37:99:0,105,1348	0/0:10,0:10:30.10:0,30,384	1/1:9,16:21:36.52:560,37,0	0/0:23,0:23:66.19:0,66,840	0/0:42,0:41:99:0,123,1576	0/0:21,0:21:57.19:0,57,739	0/0:32,0:32:93.30:0,93,1201	0/0:32,0:32:93.26:0,93,1174	0/0:29,0:29:87.28:0,87,1129	0/0:31,0:31:93.30:0,93,1206	0/0:26,0:26:78.25:0,78,1012	0/0:26,0:26:69.22:0,69,893	0/0:21,0:21:54.14:0,54,682	1/1:5,21:23:59.66:731,60,0	1/1:2,25:27:66.21:817,66,0	1/1:2,16:17:33.59:542,34,0	0/0:30,0:30:75.24:0,75,963	0/0:20,0:20:57.19:0,57,740	0/0:17,0:17:48.15:0,48,623	0/0:27,0:27:72.21:0,72,904	0/1:8,18:26:10.40:631,0,10	1/1:3,28:33:71.37:842,71,0	1/1:3,7:11:27.28:297,27,0
chr10	45112646	.	G	GT	5365.81	PASS	AB=0.663;AC=46;AF=0.821;AN=56;BaseQRankSum=2.992;DP=522;FS=10.321;HRun=10;HaplotypeScore=70.1748;InbreedingCoeff=0.6556;MQ=54.20;MQ0=8;MQRankSum=1.047;QD=11.59;ReadPosRankSum=0.424;VQSLOD=3.3283;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,0:16:32.03:161,32,0	1/1:0,1:5:14.37:89,14,0	0/0:13,0:5:8.97:0,9,72	0/0:9,0:4:2.99:0,3,25	1/1:13,0:27:15.17:160,15,0	0/0:24,0:24:56.92:0,57,468	0/0:13,0:13:29.96:0,30,246	1/1:10,0:15:20.07:110,20,0	1/1:3,0:16:28.51:143,29,0	1/1:9,24:32:28.66:684,29,0	1/1:5,14:19:39.06:403,39,0	1/1:8,0:18:31.98:165,32,0	1/1:2,0:18:37.23:192,37,0	1/1:3,0:11:20.08:106,20,0	1/1:1,22:23:45.11:480,45,0	0/1:6,17:23:19.73:426,0,20	1/1:8,0:24:42.43:213,42,0	0/1:13,7:21:10.14:246,0,10	1/1:3,0:14:32.04:186,32,0	1/1:2,0:20:39.89:204,40,0	1/1:3,0:7:5.68:28,6,0	1/1:4,0:16:17.17:91,17,0	1/1:7,1:24:46.33:265,46,0	1/1:3,1:13:22.89:132,23,0	1/1:6,15:21:11.45:327,11,0	1/1:7,1:21:32.56:201,33,0	1/1:5,2:31:51.58:296,52,0	1/1:3,0:9:11.36:56,11,0
chr10	45113415	.	TTAA	T	1644.95	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.609;DP=658;FS=3.071;HRun=0;HaplotypeScore=90.8536;InbreedingCoeff=0.9916;MQ=56.71;MQ0=0;MQRankSum=2.071;QD=42.18;ReadPosRankSum=0.598;VQSLOD=5.0421;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:96.33:0,96,2238	0/0:11,0:11:33.11:0,33,780	0/0:12,0:10:15.83:0,16,428	0/0:11,0:10:24.08:0,24,541	0/0:27,0:27:78.19:0,78,1722	1/1:0,26:25:72.20:1237,72,0	1/1:0,13:12:30.10:529,30,0	0/0:32,0:31:90.29:0,90,2018	0/0:24,0:24:72.22:0,72,1547	0/0:23,0:23:69.24:0,69,1612	0/0:27,0:27:81.16:0,81,1717	0/0:25,0:25:72.23:0,72,1621	0/0:21,0:21:63.18:0,63,1440	0/0:21,0:21:63.22:0,63,1489	0/0:27,0:27:78.26:0,78,1779	0/0:23,0:23:69.24:0,69,1622	0/0:26,0:26:69.19:0,69,1568	0/0:17,0:17:51.18:0,51,1206	0/0:17,0:16:48.15:0,48,1080	0/0:37,0:37:99:0,111,2587	0/0:24,0:24:66.20:0,66,1457	0/0:24,0:24:69.20:0,69,1536	0/0:31,0:31:93.30:0,93,2142	0/0:15,0:15:42.14:0,42,993	0/0:30,0:30:90.26:0,90,2030	0/0:28,0:28:33.18:0,33,1859	0/0:37,0:37:99:0,111,2599	0/0:14,0:14:42.14:0,42,993
chr10	45115723	.	ATGTG	A	1277.74	PASS	AB=0.927;AC=18;AF=0.346;AN=52;BaseQRankSum=-0.535;DP=503;FS=0.000;HRun=0;HaplotypeScore=108.1534;InbreedingCoeff=0.4913;MQ=57.69;MQ0=16;MQRankSum=0.084;QD=6.62;ReadPosRankSum=2.143;VQSLOD=2.1358;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:17:24.41:0,24,115	0/0:2,0:5:5.49:0,5,24	./.	./.	0/0:30,0:31:6.27:0,6,647	0/1:12,0:15:34.59:35,0,51	0/0:9,0:8:2.97:0,3,45	0/1:32,0:24:16.01:16,0,53	1/1:4,15:21:24.06:338,24,0	0/0:18,0:18:29.08:0,29,494	0/0:20,0:19:35.38:0,35,686	1/1:9,7:17:6.02:160,6,0	1/1:7,3:10:6.02:86,6,0	1/1:6,5:11:12.04:189,12,0	0/0:19,0:19:33.10:0,33,727	0/0:7,0:6:9.03:0,9,190	0/0:8,0:16:11.22:0,11,60	0/0:13,0:13:14.97:0,15,293	0/0:18,0:16:16.85:0,17,188	0/0:22,0:22:9.85:0,10,595	0/1:31,0:28:34.88:35,0,401	1/1:5,3:7:2.90:47,3,0	1/1:9,10:19:27.09:406,27,0	1/1:11,4:15:9.47:116,9,0	0/1:12,1:14:26.49:26,0,251	0/0:25,0:27:24.64:0,25,413	0/0:25,0:27:29.83:0,30,469	0/0:8,0:10:11.90:0,12,174
chr10	45116059	.	AT	A	6814.63	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=8.237;DP=559;FS=0.773;HRun=10;HaplotypeScore=65.0254;InbreedingCoeff=0.9845;MQ=58.57;MQ0=9;MQRankSum=-1.985;QD=18.42;ReadPosRankSum=-0.184;VQSLOD=5.2889;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,21:27:61.29:588,61,0	0/0:5,0:5:15.04:0,15,166	0/0:23,0:9:17.96:0,18,168	0/0:15,0:9:23.87:0,24,218	1/1:6,22:27:68.95:591,69,0	1/1:3,0:21:32.59:96,33,0	1/1:3,0:17:8.78:38,9,0	1/1:6,17:19:32.94:280,33,0	0/0:18,0:18:25.19:0,25,487	1/1:3,22:25:65.98:572,66,0	1/1:2,23:25:62.19:528,62,0	0/0:17,1:18:16.07:0,16,405	0/0:11,0:11:33.09:0,33,365	0/0:11,0:11:27.07:0,27,299	1/1:0,26:25:65.99:573,66,0	1/1:3,22:25:26.57:483,27,0	0/0:42,0:41:93.23:0,93,1010	1/1:2,18:20:50.97:443,51,0	1/1:5,18:21:53.93:461,54,0	1/1:2,20:22:47.97:417,48,0	1/1:2,9:11:23.99:208,24,0	0/0:12,0:12:36.10:0,36,398	0/0:12,0:12:33.09:0,33,365	0/0:20,0:20:57.14:0,57,622	1/1:2,12:14:32.99:287,33,0	1/1:1,21:23:62.02:527,62,0	1/1:6,21:25:56.87:491,57,0	1/1:1,9:10:26.99:234,27,0
chr10	45116158	.	A	AT	5492.23	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-10.736;DP=606;FS=11.135;HRun=8;HaplotypeScore=56.6179;InbreedingCoeff=0.9913;MQ=59.44;MQ0=0;MQRankSum=0.829;QD=24.85;ReadPosRankSum=-0.748;VQSLOD=4.7181;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,1:37:71.02:360,71,0	0/0:10,0:10:24.01:0,24,220	0/0:17,0:10:23.94:0,24,209	0/0:8,0:7:14.97:0,15,129	1/1:3,21:24:32.71:630,33,0	0/0:20,0:19:57.01:0,57,517	0/0:13,0:12:30.01:0,30,275	1/1:4,14:18:42.11:475,42,0	0/0:19,0:19:54.02:0,54,489	0/0:36,0:35:96.04:0,96,875	0/0:17,0:17:48.03:0,48,439	0/0:23,0:23:66.04:0,66,604	0/0:26,0:26:78.04:0,78,713	0/0:18,0:18:54.03:0,54,494	0/0:27,0:27:69.02:0,69,631	0/0:18,0:18:51.03:0,51,466	0/0:30,0:30:65.01:0,65,570	0/0:23,0:23:59.97:0,60,541	1/1:0,22:22:66.20:762,66,0	1/1:3,22:26:69:762,69,0	1/1:1,7:8:11.63:138,12,0	0/0:24,0:23:66.04:0,66,604	0/0:20,0:20:57.01:0,57,516	0/0:14,0:14:27.01:0,27,247	0/0:22,0:22:60.03:0,60,548	1/1:4,26:30:53.77:870,54,0	1/1:6,32:37:62.80:976,63,0	1/1:1,17:18:45.13:518,45,0
chr10	45117035	.	G	GGTTTGTTT	9366.35	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-2.997;DP=695;FS=30.460;HRun=0;HaplotypeScore=155.4436;InbreedingCoeff=0.9284;MQ=60.86;MQ0=3;MQRankSum=-10.400;QD=32.19;ReadPosRankSum=-4.691;VQSLOD=2.3017;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:25,5:31:33.10:1013,33,0	0/0:18,0:18:42.11:0,42,1012	0/0:20,0:18:12.04:0,12,248	0/0:15,0:13:9.03:0,9,186	1/1:16,5:22:18.06:655,18,0	1/1:19,0:16:15.05:534,15,0	1/1:11,0:12:3.01:94,3,0	1/1:47,0:40:30.09:740,30,0	0/0:26,0:26:54.17:0,54,1267	0/0:24,0:24:45.15:0,45,1144	0/0:28,0:28:51.17:0,51,1242	0/0:29,0:28:69.16:0,69,1595	0/0:25,0:25:57.18:0,57,1398	0/0:25,0:24:48.16:0,48,1162	0/0:26,0:26:57.19:0,57,1400	0/0:37,0:38:78.27:0,78,1878	0/0:19,0:19:42.09:0,42,917	0/0:11,0:11:30.03:0,30,591	1/1:17,5:22:27.09:855,27,0	1/1:14,8:23:36.12:1239,36,0	1/1:16,2:19:12.04:393,12,0	0/0:29,0:29:57.15:0,57,1366	0/0:28,0:28:63.16:0,63,1463	0/0:18,0:18:45.15:0,45,1144	0/0:25,0:25:60.16:0,60,1399	1/1:21,10:26:45.15:1661,45,0	1/1:16,21:29:54.18:2057,54,0	1/1:8,1:9:3.01:124,3,0
chr10	45117173	.	TGGTGGGGGGAAG	T	1879.59	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.729;DP=643;FS=1.985;HRun=0;HaplotypeScore=216.8675;InbreedingCoeff=0.9935;MQ=75.06;MQ0=0;MQRankSum=-6.992;QD=72.29;ReadPosRankSum=1.586;VQSLOD=3.6408;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:69.24:0,69,3831	0/0:7,0:7:21.07:0,21,1211	0/0:15,0:15:36.12:0,36,1540	0/0:17,0:18:51.16:0,51,1999	0/0:29,0:29:81.25:0,81,4092	1/1:4,13:17:36.12:1333,36,0	1/1:2,7:9:18.06:666,18,0	0/0:32,0:32:78.26:0,78,3628	0/0:19,0:19:51.18:0,51,3126	0/0:31,0:31:87.29:0,87,4994	0/0:27,0:27:72.24:0,72,3747	0/0:16,0:16:48.16:0,48,2917	0/0:23,0:23:69.24:0,69,4041	0/0:31,0:31:93.32:0,93,5604	0/0:22,0:22:63.22:0,63,3652	0/0:31,0:31:87.30:0,87,5245	0/0:16,0:16:39.13:0,39,2331	0/0:23,0:23:69.24:0,69,4061	0/0:18,0:18:51.18:0,51,2754	0/0:35,0:35:99:0,102,6191	0/0:26,0:26:78.27:0,78,4299	0/0:30,0:30:87.29:0,87,4477	0/0:32,0:32:90.31:0,90,5339	0/0:15,0:14:45.15:0,45,2617	0/0:23,0:23:69.24:0,69,3874	0/0:30,0:29:75.25:0,75,4317	0/0:31,0:31:78.27:0,78,4376	0/0:13,0:13:39.13:0,39,2121
chr10	45118106	.	CTG	C	1244.90	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.022;DP=557;FS=2.372;HRun=0;HaplotypeScore=115.1058;InbreedingCoeff=0.9860;MQ=76.14;MQ0=0;MQRankSum=-1.796;QD=31.12;ReadPosRankSum=-0.464;VQSLOD=5.4999;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:87.30:0,87,1628	0/0:7,0:7:21.07:0,21,391	0/0:12,0:12:29.93:0,30,483	0/0:10,0:10:17.30:0,17,295	0/0:15,0:15:42.13:0,42,755	1/1:2,19:21:51.17:749,51,0	1/1:3,16:19:42.14:618,42,0	0/0:17,0:17:45.15:0,45,806	0/0:17,0:17:51.17:0,51,925	0/0:9,0:9:27.09:0,27,502	0/0:8,0:8:24.07:0,24,412	0/0:42,0:42:99:0,123,2256	0/0:24,0:24:69.22:0,69,1249	0/0:24,0:24:66.21:0,66,1193	0/0:21,0:21:63.22:0,63,1176	0/0:18,0:18:54.19:0,54,1010	0/0:33,0:33:99:0,99,1853	0/0:19,0:19:51.17:0,51,944	0/0:15,0:15:45.14:0,45,784	0/0:14,0:14:42.12:0,42,716	0/0:67,0:67:99:0,193,3532	0/0:22,0:22:66.23:0,66,1218	0/0:8,0:8:24.08:0,24,449	0/0:37,0:37:99:0,108,2021	0/0:13,0:13:39.12:0,39,681	0/0:15,0:15:45.15:0,45,833	0/0:14,0:14:42.14:0,42,786	0/0:6,0:6:18.06:0,18,328
chr10	45118671	.	TA	T	631.36	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=5.234;DP=643;FS=0.000;HRun=9;HaplotypeScore=64.4505;InbreedingCoeff=0.6475;MQ=68.11;MQ0=0;MQRankSum=-1.080;QD=17.06;ReadPosRankSum=-0.920;VQSLOD=3.4323;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,29:32:78.03:714,78,0	0/0:13,0:13:36.11:0,36,415	0/0:9,0:9:20.82:0,21,191	0/1:5,0:5:23.61:24,0,26	0/0:31,0:31:81.24:0,81,934	0/0:19,0:19:32.88:0,33,269	0/0:20,0:20:55.13:0,55,307	0/0:34,0:34:78.21:0,78,883	0/0:14,0:14:33.08:0,33,364	0/0:29,1:30:50.75:0,51,830	0/0:23,0:23:66.18:0,66,752	0/0:36,0:36:99:0,99,1133	0/0:24,0:24:69.17:0,69,773	0/0:30,1:31:81.23:0,81,924	0/0:36,0:37:99:0,102,1145	0/0:20,0:20:57.16:0,57,648	0/0:17,0:17:45.13:0,45,519	0/0:13,0:14:38.94:0,39,420	0/0:21,0:21:60.14:0,60,664	0/0:23,0:22:54.15:0,54,613	0/0:29,0:29:68.92:0,69,742	0/0:22,0:22:63.19:0,63,724	0/0:21,0:21:57.14:0,57,630	0/0:19,0:20:59.99:0,60,661	0/0:23,0:23:63.16:0,63,703	0/0:18,0:18:38.63:0,39,431	0/0:43,0:42:99:0,120,1365	0/0:13,0:13:33.08:0,33,370
chr10	45121042	.	CAACAGATTGCCTAA	C	1100.05	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.081;DP=788;FS=4.994;HRun=0;HaplotypeScore=295.3977;InbreedingCoeff=0.9979;MQ=86.79;MQ0=0;MQRankSum=-5.142;QD=110.00;ReadPosRankSum=0.746;VQSLOD=3.0598;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,129,8876	1/1:0,10:10:26.72:1194,27,0	0/0:29,0:29:87.25:0,87,4526	0/0:23,0:23:69.24:0,69,4141	0/0:24,0:24:72.25:0,72,4091	0/0:22,0:22:66.23:0,66,4564	0/0:31,0:31:93.32:0,93,6093	0/0:31,0:31:93.31:0,93,5923	0/0:34,0:34:99:0,99,6952	0/0:41,0:41:99:0,123,8426	0/0:20,0:20:60.21:0,60,4014	0/0:34,0:34:99:0,102,6397	0/0:37,0:37:99:0,111,7483	0/0:33,0:33:99:0,99,7058	0/0:27,0:27:81.28:0,81,5287	0/0:45,0:45:99:0,135,9279	0/0:36,0:36:99:0,108,7521	0/0:15,0:15:45.15:0,45,3125	0/0:20,0:20:60.21:0,60,3584	0/0:26,0:26:78.27:0,78,5223	0/0:36,0:36:99:0,108,7363	0/0:25,0:25:75.26:0,75,4749	0/0:23,0:23:69.24:0,69,4415	0/0:28,0:28:84.29:0,84,5974	0/0:21,0:21:63.22:0,63,4291	0/0:33,0:33:99:0,99,6898	0/0:32,0:32:96.28:0,96,6223	0/0:9,0:9:27.09:0,27,1868
chr10	45122313	.	CA	C	1807.89	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.907;DP=779;FS=5.287;HRun=2;HaplotypeScore=77.7374;InbreedingCoeff=0.9863;MQ=69.83;MQ0=1;MQRankSum=-1.732;QD=36.16;ReadPosRankSum=-1.156;VQSLOD=3.6344;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,126,1981	0/0:16,0:16:48.16:0,48,764	0/0:14,0:13:39.03:0,39,545	0/0:23,0:19:12.67:0,13,594	0/0:23,0:23:69.24:0,69,1102	1/1:0,22:22:63.21:881,63,0	1/1:0,28:28:75.25:1049,75,0	0/0:48,0:48:99:0,144,2247	0/0:28,0:28:84.29:0,84,1340	0/0:23,0:23:69.23:0,69,1092	0/0:20,0:20:60.20:0,60,959	0/0:29,0:29:87.30:0,87,1385	0/0:37,0:37:99:0,111,1741	0/0:34,0:34:99:0,100,1570	0/0:35,0:35:99:0,105,1628	0/0:30,0:30:90.30:0,90,1420	0/0:27,0:27:81.23:0,81,1265	0/0:33,0:33:99:0,99,1528	0/0:18,0:18:51.17:0,51,812	0/0:24,0:24:70.08:0,70,1070	0/0:38,0:38:99:0,114,1760	0/0:27,0:27:81.26:0,81,1272	0/0:21,0:21:63.21:0,63,1004	0/0:26,0:26:72.23:0,72,1124	0/0:21,0:21:63.20:0,63,984	0/0:25,0:25:75.26:0,75,1195	0/0:37,0:37:99:0,111,1770	0/0:25,0:25:72.25:0,72,1137
chr10	45122474	.	TC	T	957.92	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.114;DP=692;FS=0.721;HRun=3;HaplotypeScore=66.5820;InbreedingCoeff=0.9999;MQ=91.23;MQ0=0;MQRankSum=-2.944;QD=28.17;ReadPosRankSum=0.712;VQSLOD=2.8972;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:63.10:0,63,849	0/0:19,0:19:57.18:0,57,801	0/0:33,0:33:84.28:0,84,1197	0/0:22,0:22:57.16:0,57,766	0/0:22,0:22:66.21:0,66,933	1/1:0,21:21:54.17:648,54,0	1/1:1,12:13:36.11:432,36,0	0/0:41,0:41:99:0,120,1663	0/0:28,0:28:81.26:0,81,1146	0/0:23,0:23:66.22:0,66,935	0/0:19,0:19:54.17:0,54,757	0/0:20,0:20:60.19:0,60,847	0/0:16,0:16:48.15:0,48,673	0/0:33,0:33:99:0,99,1405	0/0:36,0:36:99:0,108,1554	0/0:23,0:23:69.23:0,69,993	0/0:20,0:20:57.19:0,57,816	0/0:21,0:21:56.60:0,57,801	0/0:29,0:29:75.24:0,75,1048	0/0:29,0:29:84.22:0,84,1167	0/0:29,0:29:87.27:0,87,1215	0/0:15,0:15:45.13:0,45,611	0/0:24,0:24:69.22:0,69,975	0/0:23,0:23:69.22:0,69,976	0/0:27,0:27:78.25:0,78,1104	0/0:20,0:20:60.20:0,60,864	0/0:49,0:49:99:0,144,1990	0/0:14,0:14:42.14:0,42,605
chr10	45123830	.	GGCACCCCCTTCTCTCACAA	G	7567.42	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=11.219;DP=614;FS=5.390;HRun=0;HaplotypeScore=311.5277;InbreedingCoeff=0.9816;MQ=80.43;MQ0=0;MQRankSum=-10.862;QD=51.83;ReadPosRankSum=2.995;VQSLOD=3.6035;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:66.23:0,66,4973	0/0:13,0:13:36.12:0,36,2821	0/0:10,0:10:21.07:0,21,1310	0/0:24,0:24:46.18:0,46,2790	0/0:12,0:12:27.09:0,27,1954	0/0:25,0:25:66.23:0,66,5172	0/0:17,0:17:42.13:0,42,3056	0/0:24,0:24:48.16:0,48,3028	1/1:7,7:14:15.05:775,15,0	0/0:14,0:14:27.09:0,27,2349	0/0:8,0:8:21.07:0,21,1449	1/1:8,16:24:33.11:1704,33,0	1/1:6,14:20:18.06:929,18,0	1/1:11,12:23:24.08:1239,24,0	0/0:30,0:30:75.26:0,75,5800	0/0:37,0:37:96.32:0,96,7745	0/0:25,0:25:63.22:0,63,4982	0/0:24,0:24:51.18:0,51,4290	0/0:23,0:23:57.20:0,57,3420	0/0:22,0:22:57.20:0,57,4102	0/0:35,0:35:72.23:0,72,5413	1/1:9,13:22:27.09:1384,27,0	1/1:1,19:20:20.55:1073,21,0	1/1:11,12:23:9.03:465,9,0	0/0:21,0:21:57.20:0,57,4805	0/0:26,0:26:57.20:0,57,4226	0/0:35,0:35:75.26:0,75,5532	0/0:13,0:13:33.11:0,33,2735
chr10	45124312	.	T	TTA	12033.30	PASS	AB=0.571;AC=21;AF=0.375;AN=56;BaseQRankSum=18.106;DP=694;FS=10.331;HRun=0;HaplotypeScore=107.9575;InbreedingCoeff=0.9219;MQ=88.59;MQ0=0;MQRankSum=-6.537;QD=44.90;ReadPosRankSum=-1.723;VQSLOD=5.1322;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,28:32:81.28:1497,81,0	0/0:14,0:14:42.14:0,42,619	0/0:27,0:27:74.84:0,75,1066	0/0:28,0:28:72.20:0,72,1009	1/1:2,25:28:54.19:1010,54,0	1/1:3,17:20:48.16:898,48,0	1/1:1,26:27:78.27:1459,78,0	1/1:9,23:32:84.21:1420,84,0	0/0:30,0:30:87.27:0,87,1243	0/0:22,0:22:66.22:0,66,971	0/0:25,0:25:72.23:0,72,1041	0/0:21,0:21:63.19:0,63,891	0/0:31,0:31:90.30:0,90,1309	0/0:24,0:24:69.23:0,69,1016	0/0:34,0:34:99:0,99,1419	0/0:34,0:34:96.31:0,96,1395	0/0:35,0:35:99:0,105,1544	0/0:21,0:21:63.17:0,63,904	1/1:7,13:20:54.18:965,54,0	1/1:2,24:24:60.21:1107,60,0	1/1:3,22:26:63.21:1157,63,0	0/0:17,0:17:45.15:0,45,663	0/0:20,0:20:57.18:0,57,820	0/0:24,0:24:69.23:0,69,1016	0/0:19,0:19:57.19:0,57,840	0/1:6,18:24:22.14:1022,0,22	1/1:2,22:25:66.23:1218,66,0	1/1:1,6:7:15.05:281,15,0
chr10	45125700	.	AACACAC	A	3919.87	PASS	AB=0.842;AC=20;AF=0.357;AN=56;BaseQRankSum=7.890;DP=614;FS=5.749;HRun=0;HaplotypeScore=201.8814;InbreedingCoeff=0.7109;MQ=49.19;MQ0=4;MQRankSum=-8.422;QD=14.46;ReadPosRankSum=0.206;VQSLOD=2.6277;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:38,0:41:9.03:117,9,0	0/0:8,0:9:15.03:0,15,260	0/0:19,0:11:2.98:0,3,22	0/0:11,0:9:5.61:0,6,78	1/1:5,13:18:24.08:496,24,0	0/1:15,0:20:11.81:173,0,12	0/1:20,0:23:6.36:103,0,6	1/1:28,5:33:26.75:345,27,0	0/0:14,0:17:15.52:0,16,354	0/0:20,0:20:47.39:0,47,815	0/0:14,0:14:11.98:0,12,198	0/0:14,0:20:3.88:0,4,27	0/0:14,0:27:17.48:0,17,287	0/0:15,0:21:19:0,19,414	0/0:28,0:27:18.31:0,18,367	0/0:19,0:19:15.89:0,16,252	0/0:12,0:29:15.05:0,15,312	0/0:14,0:14:14.47:0,14,286	1/1:22,0:22:9.03:170,9,0	1/1:2,16:18:36.08:703,36,0	1/1:24,10:34:2.97:62,3,0	0/0:21,0:21:12.03:0,12,198	0/0:6,0:13:6.02:0,6,157	0/0:31,0:31:15.46:0,15,217	0/0:23,0:24:14.15:0,14,258	1/1:12,14:25:39.05:762,39,0	1/1:11,9:20:11.37:248,11,0	1/1:2,14:16:36.12:740,36,0
chr10	45125716	.	C	CACACACACACAC	2853.34	PASS	AB=1.000;AC=35;AF=0.625;AN=56;BaseQRankSum=-9.649;DP=603;FS=9.621;HRun=0;HaplotypeScore=249.2671;InbreedingCoeff=0.5514;MQ=42.68;MQ0=11;MQRankSum=3.286;QD=6.34;ReadPosRankSum=-2.455;VQSLOD=0.5303;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:8.52:0,9,150	0/1:11,0:11:53.73:71,0,54	1/1:21,0:10:0.89:2,1,0	0/1:20,0:8:0:0,0,0	0/0:16,0:16:24.08:0,24,627	0/0:13,0:13:17.99:0,18,443	0/0:18,0:18:14.98:0,15,213	1/1:31,0:29:14.78:99,15,0	1/1:15,0:15:15.05:389,15,0	1/1:19,0:19:21.58:223,22,0	1/1:17,0:17:9:99,9,0	1/1:27,0:24:1.83:4,2,0	1/1:30,0:30:5.20:180,5,0	1/1:21,0:21:16.45:427,16,0	1/1:29,0:28:12.45:121,12,0	1/1:21,0:20:12.48:148,12,0	1/1:34,0:34:21.02:265,21,0	0/1:18,0:16:1.56:153,0,2	0/0:11,0:11:4.17:0,4,68	0/0:21,0:20:33.10:0,33,702	0/0:29,0:28:8.98:0,9,150	1/1:20,0:20:3.01:81,3,0	1/1:15,0:15:6.02:349,6,0	1/1:19,14:33:3.01:172,3,0	1/1:28,0:27:14.84:240,15,0	0/1:22,0:21:9.97:10,0,718	0/1:17,0:17:1.88:2,0,257	0/0:15,0:15:18.20:0,18,809
chr10	45125737	.	ACG	A	67.42	PASS	AB=1.000;AC=10;AF=0.179;AN=56;BaseQRankSum=4.884;DP=646;FS=0.000;HRun=0;HaplotypeScore=178.3795;InbreedingCoeff=-0.0489;MQ=46.17;MQ0=13;MQRankSum=-3.072;QD=0.34;ReadPosRankSum=-2.363;VQSLOD=2.2479;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:20,0:20:8.12:19,0,8	0/0:8,0:8:18.05:0,18,304	0/0:18,1:11:15.05:0,15,336	0/1:23,0:9:14.62:15,0,265	0/0:23,0:23:13.45:0,13,407	1/1:13,0:13:1.63:38,2,0	0/1:24,0:24:10.23:10,0,87	0/0:31,0:29:41.33:0,41,946	0/0:16,0:16:4.57:0,5,434	0/1:25,0:25:27.36:27,0,542	0/1:16,0:16:7.98:8,0,273	0/0:25,0:22:28.45:0,28,465	0/0:26,0:26:35.66:0,36,603	0/0:25,0:25:18.14:0,18,606	0/1:28,0:27:25.29:25,0,308	0/1:25,0:24:7.11:7,0,572	0/0:35,0:35:47.78:0,48,759	0/1:22,0:20:51.91:52,0,567	0/0:19,0:18:31.79:0,32,569	0/0:29,0:28:59.58:0,60,699	0/0:33,0:32:20.64:0,21,331	0/0:19,4:23:29.84:0,30,499	0/0:16,0:16:30.10:0,30,482	0/0:30,0:29:39:0,39,681	0/0:29,0:27:0.19:0,0,669	0/0:28,0:27:55.64:0,56,810	0/0:19,0:19:35.99:0,36,502	0/0:16,0:16:13.16:0,13,314
chr10	45125739	.	GCACA	G	653.02	PASS	AB=0.852;AC=5;AF=0.089;AN=56;BaseQRankSum=5.314;DP=644;FS=0.812;HRun=0;HaplotypeScore=190.4156;InbreedingCoeff=0.7645;MQ=47.02;MQ0=13;MQRankSum=-3.350;QD=11.07;ReadPosRankSum=0.201;VQSLOD=3.2711;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:19,4:23:30:126,0,30	0/0:8,0:8:15.05:0,15,289	0/0:21,0:13:24.98:0,25,447	0/0:22,0:9:25.38:0,25,343	0/0:22,0:23:30.52:0,31,303	1/1:7,5:12:18.06:279,18,0	1/1:21,3:24:32.55:376,33,0	0/0:31,0:29:43.46:0,43,577	0/0:16,0:16:30.07:0,30,536	0/0:22,0:22:53.36:0,53,844	0/0:15,0:15:21.05:0,21,325	0/0:25,0:23:31.49:0,31,420	0/0:26,0:26:39.10:0,39,637	0/0:26,0:26:39.48:0,39,721	0/0:28,0:27:23.39:0,23,480	0/0:24,0:23:42.13:0,42,632	0/0:32,0:32:54.01:0,54,789	0/0:20,0:19:45.49:0,45,694	0/0:19,0:19:45.17:0,45,504	0/0:29,0:28:44.08:0,44,453	0/0:30,0:29:19.91:0,20,245	0/0:26,0:26:39.09:0,39,545	0/0:17,0:17:33.07:0,33,488	0/0:30,0:29:42.11:0,42,616	0/0:29,0:27:47.28:0,47,752	0/0:27,0:26:59.78:0,60,584	0/0:21,0:21:38.54:0,39,419	0/0:14,0:15:22.87:0,23,163
chr10	45125747	.	A	ACGCACGCACG	592.33	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=1.748;DP=650;FS=0.766;HRun=0;HaplotypeScore=259.3041;InbreedingCoeff=0.1860;MQ=55.81;MQ0=9;MQRankSum=-1.240;QD=2.88;ReadPosRankSum=-1.690;VQSLOD=1.9486;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,21:28:3.48:36,3,0	0/0:8,0:8:18.06:0,18,513	0/0:27,0:20:36.29:0,36,1029	0/0:26,0:13:36.11:0,36,840	0/0:22,0:22:57.18:0,57,1391	0/1:13,0:13:3.27:123,0,3	1/1:19,0:19:5.80:431,6,0	0/0:28,0:28:71.78:0,72,1502	0/0:15,0:15:26.17:0,26,564	0/0:25,0:25:65.85:0,66,1219	0/0:14,0:14:20.80:0,21,483	0/0:19,0:18:35.38:0,35,931	0/1:24,0:24:8.07:8,0,1088	0/0:27,0:27:39.33:0,39,831	0/0:29,0:28:33.07:0,33,645	0/1:22,0:21:16.06:16,0,982	0/1:31,0:31:21.94:22,0,1132	0/1:23,0:21:25.02:25,0,1176	0/0:21,0:20:52.70:0,53,1029	0/0:30,0:29:63.20:0,63,1662	0/0:31,0:30:25.44:0,25,531	0/0:25,0:25:28.73:0,29,1060	0/1:16,0:16:65.38:65,0,699	0/1:30,0:29:11.40:11,0,1095	0/0:30,0:28:56.36:0,56,1239	0/0:27,0:27:74.91:0,75,1902	0/0:22,0:22:50.48:0,50,1041	0/0:18,0:18:54.09:0,54,1322
chr10	45126230	.	ATG	A	2130.06	PASS	AB=0.939;AC=19;AF=0.365;AN=52;BaseQRankSum=5.002;DP=669;FS=2.327;HRun=0;HaplotypeScore=107.1605;InbreedingCoeff=0.4643;MQ=61.89;MQ0=11;MQRankSum=2.527;QD=6.57;ReadPosRankSum=2.898;VQSLOD=3.4653;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:28:3:0,3,26	0/0:4,0:8:11.53:0,12,120	./.	./.	0/0:28,0:26:6.47:0,6,66	0/0:6,0:27:38.58:0,39,329	0/0:10,0:33:14.74:0,15,115	0/0:23,0:23:25.26:0,25,286	0/1:18,2:20:4.71:5,0,420	1/1:14,14:29:41.92:438,42,0	1/1:12,6:22:29.41:257,29,0	0/0:22,0:23:27.99:0,28,574	0/1:12,1:13:12.48:12,0,210	0/0:21,0:21:27.07:0,27,388	1/1:13,19:33:18.97:586,19,0	1/1:8,15:24:26.85:472,27,0	0/1:37,3:40:0.80:1,0,827	1/1:13,4:17:12.01:134,12,0	0/0:15,0:15:15:0,15,164	0/0:36,0:36:11.86:0,12,138	0/1:19,0:18:0:0,0,0	0/1:18,3:21:12.45:12,0,250	0/1:26,0:28:8.95:9,0,568	0/1:25,2:27:30.87:31,0,412	1/1:18,12:30:32.93:349,33,0	0/0:24,0:20:42.13:0,42,534	0/0:18,0:20:12.92:0,13,81	0/0:9,0:9:5.99:0,6,60
chr10	45127204	.	GT	G	9169.34	PASS	AB=0.571;AC=49;AF=0.875;AN=56;BaseQRankSum=2.392;DP=611;FS=5.162;HRun=12;HaplotypeScore=76.6364;InbreedingCoeff=0.8483;MQ=74.41;MQ0=0;MQRankSum=-2.941;QD=16.70;ReadPosRankSum=5.712;VQSLOD=5.6767;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,28:35:46.27:533,46,0	1/1:0,7:7:20.92:162,21,0	0/0:20,0:11:11.96:0,12,99	0/0:20,0:15:12.54:0,13,107	0/1:6,18:24:4.15:338,0,4	1/1:1,10:11:26.90:209,27,0	1/1:7,17:24:26.40:327,26,0	0/0:21,1:22:30.86:0,31,488	1/1:2,17:19:38.84:302,39,0	1/1:2,21:23:35.28:454,35,0	1/1:0,17:17:50.76:390,51,0	1/1:2,22:24:29.19:402,29,0	1/1:2,13:16:31.91:238,32,0	1/1:5,22:27:62.75:488,63,0	1/1:3,17:21:46.84:354,47,0	1/1:4,19:24:49.85:377,50,0	1/1:2,32:35:91.68:700,92,0	1/1:2,24:26:62.76:488,63,0	1/1:5,15:20:42.94:336,43,0	1/1:5,23:29:37.40:456,37,0	1/1:3,10:13:23.90:186,24,0	1/1:7,18:26:52.76:396,53,0	1/1:6,14:20:38.84:302,39,0	1/1:5,18:23:53.78:418,54,0	1/1:4,19:23:23.33:364,23,0	1/1:2,18:20:47.78:371,48,0	1/1:8,29:37:42.47:465,42,0	1/1:0,5:5:14.94:116,15,0
chr10	45128270	.	T	TC	3393.54	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=12.884;DP=739;FS=1.485;HRun=1;HaplotypeScore=85.8641;InbreedingCoeff=0.9982;MQ=85.80;MQ0=0;MQRankSum=-1.111;QD=40.89;ReadPosRankSum=1.418;VQSLOD=4.1221;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,40:41:99:1751,117,0	0/0:16,0:16:48.16:0,48,623	0/0:30,0:30:81.25:0,81,1034	0/0:20,0:20:57.12:0,57,705	0/0:20,0:20:60.04:0,60,719	1/1:2,11:13:30.10:450,30,0	1/1:1,28:29:81.27:1193,81,0	0/0:25,0:24:66.21:0,66,845	0/0:30,0:29:78.25:0,78,1012	0/0:24,0:24:72.22:0,72,911	0/0:17,0:17:48.14:0,48,606	0/0:27,0:27:81.14:0,81,1004	0/0:37,0:36:99:0,108,1380	0/0:34,0:34:96.30:0,96,1224	0/0:44,0:44:99:0,129,1583	0/0:32,0:32:93.28:0,93,1180	0/0:31,0:31:93.30:0,93,1207	0/0:9,0:9:23.44:0,23,280	0/0:31,0:31:84.21:0,84,1039	0/0:29,0:29:87.07:0,87,1052	0/0:47,0:47:99:0,135,1717	0/0:22,0:22:63.17:0,63,775	0/0:13,0:13:39.11:0,39,491	0/0:39,0:38:99:0,111,1441	0/0:17,0:17:48.16:0,48,623	0/0:27,0:27:72.23:0,72,935	0/0:27,0:27:81.25:0,81,1036	0/0:8,0:8:24.08:0,24,311
chr10	45128356	.	CAT	C	879.42	PASS	AB=1.000;AC=10;AF=0.179;AN=56;BaseQRankSum=5.021;DP=637;FS=2.379;HRun=0;HaplotypeScore=155.2591;InbreedingCoeff=0.4832;MQ=65.75;MQ0=4;MQRankSum=-1.616;QD=5.67;ReadPosRankSum=-2.788;VQSLOD=2.8065;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:25,2:30:51.71:399,52,0	0/0:10,0:10:15.05:0,15,254	0/0:38,0:26:71.69:0,72,1101	0/0:43,0:30:61:0,61,1395	0/0:27,0:27:27.79:0,28,344	1/1:9,0:9:17.96:145,18,0	1/1:22,3:24:48.34:396,48,0	0/1:23,0:23:17.21:17,0,329	0/0:22,0:22:51.07:0,51,768	0/0:29,0:28:58.93:0,59,1137	0/0:22,0:22:12.17:0,12,544	0/0:35,0:35:59.90:0,60,991	0/0:18,0:18:30.09:0,30,503	0/0:26,0:26:9.90:0,10,529	0/0:33,0:33:66.19:0,66,1140	0/0:19,0:19:36.10:0,36,603	0/0:20,0:20:20.92:0,21,346	0/1:11,0:11:8.81:9,0,418	0/0:16,0:16:22.10:0,22,266	0/0:20,0:20:18.91:0,19,296	0/1:34,0:34:59.73:60,0,262	0/0:24,0:24:42.10:0,42,688	0/0:16,0:16:27.55:0,28,487	0/0:24,0:23:27.08:0,27,485	0/0:17,0:17:39.03:0,39,663	0/1:22,0:22:14.59:15,0,415	0/0:11,0:11:3.96:0,4,185	0/0:12,0:11:27.01:0,27,243
chr10	45128362	.	CACAT	C	836.34	PASS	AB=0.813;AC=7;AF=0.125;AN=56;BaseQRankSum=5.594;DP=653;FS=0.000;HRun=0;HaplotypeScore=173.6661;InbreedingCoeff=0.7828;MQ=56.78;MQ0=4;MQRankSum=-0.342;QD=8.99;ReadPosRankSum=-2.272;VQSLOD=2.3526;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:31,0:31:48.78:395,49,0	0/0:9,0:9:9:0,9,107	0/0:36,0:20:43.28:0,43,508	0/0:42,0:27:45.76:0,46,634	0/0:32,0:32:51.08:0,51,598	1/1:10,0:10:20.96:170,21,0	1/1:26,0:24:41.56:392,42,0	0/1:20,6:26:27:27,0,613	0/0:17,0:17:32.92:0,33,351	0/0:29,0:28:57.06:0,57,980	0/0:21,0:21:27.84:0,28,309	0/0:36,0:36:50.83:0,51,457	0/0:16,0:16:20.96:0,21,285	0/0:26,0:26:23.88:0,24,328	0/0:33,0:33:56.10:0,56,709	0/0:17,0:17:26.53:0,27,235	0/0:22,0:22:21.73:0,22,188	0/0:12,0:12:5.19:0,5,157	0/0:17,0:17:24.47:0,24,463	0/0:22,0:22:43.10:0,43,476	0/0:34,0:34:45.80:0,46,425	0/0:24,0:23:33:0,33,353	0/0:16,0:16:25.21:0,25,200	0/0:25,0:25:23.77:0,24,244	0/0:16,0:16:32.96:0,33,388	0/0:25,0:25:27.99:0,28,719	0/0:18,0:18:26.01:0,26,321	0/0:15,0:14:27.09:0,27,341
chr10	45128366	.	T	TACACACACACACAC	6218.58	PASS	AB=0.790;AC=39;AF=0.722;AN=54;BaseQRankSum=-6.682;DP=740;FS=0.000;HRun=0;HaplotypeScore=276.7085;InbreedingCoeff=0.2866;MQ=51.90;MQ0=5;MQRankSum=-1.218;QD=10.95;ReadPosRankSum=-4.779;VQSLOD=1.7985;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:35,0:35:46.01:46,0,95	1/1:6,0:9:3.01:142,3,0	0/0:35,0:17:3.01:0,3,36	0/0:41,0:25:2.80:0,3,14	0/0:14,0:32:15.02:0,15,85	1/1:10,0:10:2.99:25,3,0	0/1:28,0:26:27.68:28,0,330	1/1:25,0:25:32.87:378,33,0	1/1:14,5:27:3.01:201,3,0	1/1:30,0:29:33.40:727,33,0	1/1:20,0:20:12.01:140,12,0	1/1:34,0:34:14.67:346,15,0	1/1:12,1:27:5.73:343,6,0	1/1:26,0:26:23.16:665,23,0	1/1:24,0:47:14.88:672,15,0	1/1:13,0:23:3.03:142,3,0	1/1:21,0:21:20.97:558,21,0	1/1:13,0:13:12:131,12,0	1/1:19,0:20:19.45:235,19,0	0/0:9,0:22:11.80:0,12,109	0/1:22,0:39:13.06:13,0,22	1/1:17,4:27:9.03:543,9,0	./.	1/1:17,9:33:2.33:199,2,0	1/1:11,0:26:6.02:245,6,0	0/1:18,0:28:1.80:412,0,2	0/0:1,0:18:3.91:0,4,124	0/1:1,0:16:27.78:28,0,79
chr10	45128571	.	A	ATCTGTTGGACTCCT	34916.43	PASS	AB=0.659;AC=21;AF=0.375;AN=56;BaseQRankSum=0.438;DP=710;FS=0.000;HRun=0;HaplotypeScore=266.0085;InbreedingCoeff=0.9100;MQ=82.26;MQ0=0;MQRankSum=-17.847;QD=157.99;ReadPosRankSum=0.186;VQSLOD=4.1891;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,18:32:84.29:5663,84,0	0/0:15,0:15:45.15:0,45,1855	0/0:26,0:26:75.24:0,75,2770	0/0:38,0:38:99:0,105,3739	1/1:10,8:23:36.12:2326,36,0	1/1:3,1:4:12.04:611,12,0	1/1:18,6:25:66.23:3817,66,0	1/1:21,4:28:75.24:4093,75,0	0/0:44,0:44:99:0,129,5280	0/0:31,0:32:93.30:0,93,3624	0/0:22,0:22:66.19:0,66,2559	0/0:31,0:31:93.31:0,93,3925	0/0:27,0:27:81.26:0,81,3229	0/0:23,0:23:66.22:0,66,2493	0/0:37,0:37:99:0,111,4426	0/0:38,0:38:99:0,108,4332	0/0:34,0:34:99:0,99,4141	0/0:22,0:22:64.10:0,64,2782	1/1:11,4:16:45.11:2660,45,0	1/1:9,13:25:63.22:4267,63,0	1/1:7,4:15:21.54:1513,22,0	0/0:33,0:33:96.33:0,96,3976	0/0:18,0:18:51.16:0,51,2149	0/0:33,0:33:96.32:0,96,4079	0/0:16,0:16:48.16:0,48,1971	0/1:13,11:27:76.52:4534,0,77	1/1:7,16:23:69.24:4790,69,0	1/1:1,2:3:9.03:643,9,0
chr10	45128989	.	T	TA	8677.48	PASS	AB=0.526;AC=15;AF=0.268;AN=56;BaseQRankSum=-12.941;DP=803;FS=2.954;HRun=1;HaplotypeScore=81.7292;InbreedingCoeff=0.9085;MQ=78.73;MQ0=0;MQRankSum=-1.901;QD=39.09;ReadPosRankSum=-0.229;VQSLOD=5.2287;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,165,2077	0/0:10,0:10:30.10:0,30,389	0/0:20,0:20:30.50:0,30,529	0/0:16,0:17:37.77:0,38,421	1/1:0,23:23:57.15:828,57,0	0/0:25,0:25:72.23:0,72,935	0/0:36,0:36:99:0,102,1322	1/1:1,27:28:81.21:1168,81,0	0/0:29,0:29:81.26:0,81,1049	0/0:27,0:27:78.25:0,78,1012	0/0:9,0:9:24.08:0,24,312	0/0:34,0:34:93.29:0,93,1192	0/0:35,0:35:99:0,99,1268	0/0:37,0:37:99:0,108,1386	0/0:45,0:45:99:0,123,1581	0/0:41,0:41:99:0,120,1513	0/0:34,0:34:99:0,99,1283	0/0:33,0:33:96.27:0,96,1223	1/1:4,20:24:60.20:896,60,0	1/1:0,22:22:62.73:913,63,0	1/1:1,43:45:99:1635,111,0	0/0:22,0:22:60.16:0,60,748	0/0:18,0:17:48.13:0,48,593	0/0:35,0:35:99:0,105,1363	0/0:19,0:19:57.16:0,57,723	0/1:3,27:30:29.61:1036,0,30	1/1:0,33:33:99:1482,99,0	1/1:0,17:17:48.16:719,48,0
chr10	45129134	.	GAGA	G	7553.15	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=10.499;DP=646;FS=4.752;HRun=0;HaplotypeScore=112.1203;InbreedingCoeff=0.9977;MQ=73.31;MQ0=1;MQRankSum=-3.284;QD=38.54;ReadPosRankSum=0.365;VQSLOD=5.9568;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:53:99:0,129,2776	0/0:9,0:9:21.07:0,21,455	0/0:13,0:13:35.48:0,35,676	0/0:14,0:14:27.56:0,28,539	1/1:2,27:29:72.24:1094,72,0	0/0:21,0:21:54.19:0,54,1168	0/0:24,0:24:60.21:0,60,1281	1/1:3,16:18:45.15:704,45,0	0/0:14,0:14:33.11:0,33,710	0/0:21,0:21:60.20:0,60,1254	0/0:22,0:22:63.22:0,63,1364	0/0:24,0:24:66.23:0,66,1418	0/0:22,0:22:54.19:0,54,1118	0/0:23,0:23:60.21:0,60,1291	0/0:24,0:24:60.19:0,60,1259	0/0:24,0:24:60.19:0,60,1260	0/0:40,0:40:99:0,99,2056	0/0:17,0:17:42.14:0,42,909	1/1:4,11:15:33.11:516,33,0	1/1:0,34:34:90.26:1362,90,0	1/1:5,39:44:99:1532,99,0	0/0:15,0:15:42.14:0,42,910	0/0:18,0:18:48.12:0,48,994	0/0:34,0:34:99:0,102,2188	0/0:17,0:17:51.11:0,51,974	1/1:1,28:29:81.28:1267,81,0	1/1:1,19:20:51.17:798,51,0	1/1:0,6:6:18.06:282,18,0
chr10	45129201	.	AGG	A	1870.68	PASS	AB=0.973;AC=13;AF=0.232;AN=56;BaseQRankSum=-6.172;DP=516;FS=11.751;HRun=9;HaplotypeScore=145.5355;InbreedingCoeff=0.2805;MQ=69.97;MQ0=1;MQRankSum=2.324;QD=8.87;ReadPosRankSum=2.936;VQSLOD=0.3269;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,26:29:69.20:802,69,0	0/0:2,0:3:6.01:0,6,56	0/0:24,0:22:55.94:0,56,738	0/1:10,1:11:59.67:60,0,176	0/1:34,0:34:39.59:40,0,113	1/1:1,14:15:39.11:453,39,0	1/1:1,13:13:33.10:385,33,0	0/1:22,0:22:31.54:44,0,32	0/0:14,0:14:33.08:0,33,455	0/0:20,0:20:47.76:0,48,670	0/0:23,0:23:39.52:0,40,498	0/0:21,0:21:54.04:0,54,688	0/0:15,0:15:29.93:0,30,330	0/0:11,0:11:30.08:0,30,423	0/0:20,0:20:52.37:0,52,702	0/0:16,0:16:42.11:0,42,582	0/0:19,0:19:30.01:0,30,429	0/0:18,0:18:40.90:0,41,537	0/1:12,0:12:16.40:16,0,32	0/1:26,0:26:86.96:87,0,113	0/1:18,0:18:27.93:106,0,28	0/0:23,0:23:41.93:0,42,572	0/0:13,0:14:18.06:0,18,267	0/0:14,0:14:21.03:0,21,304	0/0:16,0:16:33.52:0,34,459	0/1:27,0:27:51.19:51,0,168	0/0:26,0:26:27.48:0,27,134	0/0:8,0:8:9.96:0,10,49
chr10	45129243	.	TC	T	361.15	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=0.154;DP=437;FS=1.458;HRun=1;HaplotypeScore=114.2184;InbreedingCoeff=0.8144;MQ=57.73;MQ0=7;MQRankSum=-4.750;QD=6.12;ReadPosRankSum=-1.893;VQSLOD=-0.2024;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:23,4:27:23.54:167,24,0	0/0:3,0:3:7.52:0,8,49	0/0:18,0:8:23.99:0,24,226	0/0:15,0:8:13.84:0,14,105	0/0:24,1:24:25.04:0,25,437	1/1:18,2:20:32.53:272,33,0	1/1:12,0:12:6.44:56,6,0	0/0:26,0:25:55.99:0,56,508	0/0:9,0:9:9.48:0,9,157	0/0:16,0:15:32.18:0,32,342	0/0:12,0:12:31.86:0,32,242	0/0:14,0:14:23.31:0,23,186	0/0:12,0:12:28.87:0,29,218	0/0:9,0:9:1.35:0,1,145	0/0:21,0:21:49.99:0,50,522	0/0:19,0:19:44.74:0,45,521	0/0:16,0:15:30.08:0,30,245	0/0:16,0:14:38.89:0,39,351	0/0:21,0:21:37.65:0,38,440	0/0:16,0:13:20.40:0,20,306	0/0:7,0:7:12.32:0,12,81	0/0:20,0:20:32.78:0,33,329	0/0:9,0:8:13.96:0,14,106	0/0:9,0:9:11.89:0,12,84	0/0:14,0:14:35.81:0,36,356	0/0:18,0:18:27.23:0,27,299	0/0:21,0:20:42.29:0,42,359	0/0:11,1:12:19.77:0,20,142
chr10	45129244	.	C	CT	1654.06	PASS	AB=0.935;AC=37;AF=0.661;AN=56;BaseQRankSum=1.811;DP=490;FS=12.689;HRun=14;HaplotypeScore=141.9685;InbreedingCoeff=0.1150;MQ=55.26;MQ0=7;MQRankSum=-2.878;QD=4.16;ReadPosRankSum=-3.038;VQSLOD=-0.2548;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:34:1.89:0,2,14	1/1:0,2:3:2.20:47,2,0	0/0:16,0:7:8.88:0,9,63	0/1:15,0:8:13:13,0,23	1/1:31,0:30:2.54:103,3,0	0/1:19,0:24:0.97:1,0,2	0/1:7,0:14:5.30:14,0,5	1/1:27,0:26:1.86:15,2,0	1/1:6,4:10:11.51:96,12,0	0/1:15,1:16:16.11:16,0,136	0/1:10,3:15:30.78:60,0,31	1/1:10,5:16:24.58:183,25,0	1/1:9,5:14:24.76:187,25,0	1/1:4,5:9:14.99:128,15,0	0/0:21,1:22:34.90:0,35,224	0/0:18,0:19:23.52:0,24,219	1/1:16,0:19:25.05:125,25,0	0/1:14,2:14:29.16:29,0,85	0/1:21,0:21:1.53:42,0,2	0/1:20,0:17:22.40:54,0,22	0/1:7,0:7:4.94:19,0,5	1/1:15,7:22:21.42:275,21,0	0/1:6,5:10:6.41:56,0,6	1/1:2,7:10:14.84:120,15,0	0/1:12,1:14:3.36:3,0,101	1/1:24,0:24:24.96:137,25,0	1/1:21,0:20:0.04:36,0,0	1/1:15,0:17:7.48:57,7,0
chr10	45129257	.	T	TTTTTTG	2761.56	PASS	AB=0.929;AC=16;AF=0.286;AN=56;BaseQRankSum=-0.290;DP=481;FS=13.482;HRun=0;HaplotypeScore=144.4642;InbreedingCoeff=0.4792;MQ=49.92;MQ0=10;MQRankSum=-2.817;QD=12.55;ReadPosRankSum=-4.456;VQSLOD=0.5023;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:33:51.51:0,52,431	0/0:3,0:3:9:0,9,94	0/0:14,0:5:8.94:0,9,103	0/1:12,0:5:2.88:3,0,47	1/1:25,1:27:31.85:480,32,0	0/1:27,0:27:14.81:15,0,254	0/0:16,0:16:32.54:0,33,226	0/1:21,0:20:27.31:187,0,27	0/0:9,0:9:16.94:0,17,119	0/0:17,0:16:30.35:0,30,524	0/0:11,0:11:29.88:0,30,276	0/0:17,0:17:37.52:0,38,276	0/0:13,0:13:38.26:0,38,272	0/0:9,0:9:15.55:0,16,104	0/0:20,0:20:52.33:0,52,668	0/0:19,0:18:53.86:0,54,734	0/1:20,0:18:76.31:76,0,123	0/0:17,0:15:38.92:0,39,507	1/1:9,9:25:0:801,0,0	0/1:18,0:16:0.21:266,0,0	1/1:6,0:7:14.24:170,14,0	0/0:18,0:18:42.33:0,42,346	0/0:13,0:12:22.89:0,23,181	0/0:12,0:12:19.97:0,20,148	0/0:17,0:17:47.96:0,48,570	1/1:22,0:23:42.51:422,43,0	0/1:9,10:22:14.01:225,0,14	1/1:15,0:15:23.41:293,23,0
chr10	45129812	.	A	AGT	2220.38	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=12.277;DP=718;FS=6.789;HRun=0;HaplotypeScore=104.4025;InbreedingCoeff=0.9991;MQ=83.50;MQ0=0;MQRankSum=-12.049;QD=35.81;ReadPosRankSum=0.426;VQSLOD=5.5453;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,11:15:32.83:451,33,0	0/0:13,0:13:39.13:0,39,636	0/0:21,0:21:56.98:0,57,835	0/0:22,0:22:50.83:0,51,773	0/0:38,0:38:99:0,114,1830	1/1:4,20:24:72.24:1032,72,0	1/1:3,20:23:61.19:880,61,0	0/0:46,0:46:99:0,135,2199	0/0:35,0:35:99:0,105,1711	0/0:36,0:36:99:0,99,1612	0/0:20,0:20:60.20:0,60,976	0/0:32,0:32:96.33:0,96,1566	0/0:27,0:27:78.27:0,78,1272	0/0:27,0:27:78.25:0,78,1248	0/0:32,0:32:96.33:0,96,1557	0/0:35,0:35:99:0,105,1713	0/0:19,0:19:57.19:0,57,930	0/0:11,0:11:27.09:0,27,440	0/0:15,0:15:42.14:0,42,685	0/0:38,0:38:99:0,111,1809	0/0:21,0:21:63.22:0,63,1021	0/0:23,0:23:66.23:0,66,1077	0/0:26,0:26:72.25:0,72,1169	0/0:16,0:16:45.15:0,45,734	0/0:23,0:23:69.24:0,69,1126	0/0:32,0:32:93.31:0,93,1496	0/0:39,0:39:99:0,117,1901	0/0:9,0:9:27.09:0,27,440
chr10	45129813	.	C	CAAA	2777.67	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=12.370;DP=722;FS=9.934;HRun=2;HaplotypeScore=116.9445;InbreedingCoeff=0.9992;MQ=83.91;MQ0=0;MQRankSum=-11.747;QD=44.80;ReadPosRankSum=-0.071;VQSLOD=2.4241;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,11:15:36.10:583,36,0	0/0:14,0:14:39.08:0,39,622	0/0:22,0:22:45.18:0,45,852	0/0:22,0:22:58.93:0,59,859	0/0:37,0:37:99:0,111,1925	1/1:4,20:24:68.92:1203,69,0	1/1:3,20:23:69.15:1134,69,0	0/0:46,0:46:99:0,132,2271	0/0:35,0:35:99:0,105,1822	0/0:34,0:34:99:0,99,1730	0/0:20,0:20:60.21:0,60,1056	0/0:32,0:32:96.32:0,96,1661	0/0:27,0:27:81.26:0,81,1400	0/0:27,0:27:78.25:0,78,1347	0/0:34,0:34:87.28:0,87,1505	0/0:35,0:35:99:0,105,1846	0/0:20,0:20:57.19:0,57,999	0/0:10,0:10:27.09:0,27,476	0/0:15,0:15:45.14:0,45,766	0/0:39,0:39:99:0,111,1929	0/0:21,0:21:63.18:0,63,1046	0/0:23,0:23:66.23:0,66,1164	0/0:25,0:25:75.22:0,75,1263	0/0:16,0:16:48.15:0,48,818	0/0:23,0:23:69.24:0,69,1217	0/0:32,0:32:96.30:0,96,1637	0/0:39,0:39:99:0,111,1951	0/0:12,0:12:27.09:0,27,453
chr10	45132052	.	A	AAG	14816.73	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-17.185;DP=687;FS=7.570;HRun=0;HaplotypeScore=70.7438;InbreedingCoeff=0.9997;MQ=84.13;MQ0=1;MQRankSum=-2.306;QD=51.09;ReadPosRankSum=0.843;VQSLOD=5.2553;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,32:33:84.29:1573,84,0	0/0:13,0:13:39.13:0,39,597	0/0:22,0:22:60.90:0,61,848	0/0:18,0:18:44.97:0,45,602	1/1:2,27:28:81.28:1498,81,0	1/1:1,32:33:96.33:1802,96,0	1/1:0,27:27:75.26:1424,75,0	1/1:3,25:31:87.27:1533,87,0	0/0:21,0:21:63.21:0,63,965	0/0:26,0:26:75.22:0,75,1106	0/0:27,0:27:81.26:0,81,1199	0/0:26,0:26:72.21:0,72,1041	0/0:36,0:36:99:0,105,1600	0/0:34,0:34:99:0,99,1446	0/0:21,0:21:63.21:0,63,962	0/0:17,0:17:51.17:0,51,780	0/0:20,0:20:57.19:0,57,873	0/0:23,0:23:66.19:0,66,954	1/1:2,13:16:45.13:790,45,0	1/1:1,37:38:99:1931,102,0	1/1:0,17:18:45.15:854,45,0	0/0:25,0:25:75.25:0,75,1130	0/0:24,0:24:66.17:0,66,936	0/0:23,0:23:66.16:0,66,939	0/0:21,0:21:63.19:0,63,923	1/1:1,29:30:87.25:1572,87,0	1/1:1,23:27:75.26:1383,75,0	1/1:0,8:8:24.08:456,24,0
chr10	45132616	.	T	TCTCTACATTTAAGAACTTGGCA	9241.26	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=5.424;DP=718;FS=10.217;HRun=0;HaplotypeScore=389.4315;InbreedingCoeff=0.9725;MQ=81.64;MQ0=0;MQRankSum=-10.151;QD=110.01;ReadPosRankSum=-4.067;VQSLOD=3.1272;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:30,3:33:48.16:3819,48,0	0/0:10,0:10:24.08:0,24,1137	0/0:23,0:23:9.03:0,9,173	0/0:20,0:20:18.06:0,18,627	0/0:30,0:30:72.25:0,72,3696	1/1:27,6:35:51.18:4285,51,0	1/1:16,0:16:18.06:1137,18,0	0/0:34,0:34:60.21:0,60,2069	0/0:19,0:19:51.16:0,51,2589	0/0:27,0:27:57.19:0,57,2696	0/0:21,0:21:57.20:0,57,2907	0/0:24,0:24:57.20:0,57,3101	0/0:35,0:35:69.24:0,69,3591	0/0:19,0:19:45.15:0,45,2341	0/0:37,0:37:84.27:0,84,4434	0/0:24,0:24:51.16:0,51,2389	0/0:18,0:18:45.15:0,45,2296	0/0:24,0:24:54.19:0,54,2898	0/0:24,0:24:36.04:0,36,981	0/0:28,0:28:69.24:0,69,3750	0/0:48,0:48:90.31:0,90,4503	0/0:20,0:20:48.16:0,48,2497	0/0:25,0:25:57.20:0,57,2519	0/0:27,0:27:51.17:0,51,2458	0/0:27,0:27:69.24:0,69,3427	0/0:30,0:30:60.20:0,60,2637	0/0:31,0:31:75.26:0,75,3682	0/0:9,0:9:24.08:0,24,1396
chr10	45133496	.	C	CA	1981.24	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-11.957;DP=603;FS=0.469;HRun=9;HaplotypeScore=55.6967;InbreedingCoeff=0.9751;MQ=74.12;MQ0=1;MQRankSum=1.687;QD=26.07;ReadPosRankSum=2.371;VQSLOD=4.2032;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,22:24:63.17:697,63,0	0/0:6,0:6:18:0,18,156	0/0:14,0:13:25.96:0,26,204	0/0:15,0:15:10.99:0,11,76	0/0:40,2:42:68.76:0,69,823	1/1:3,29:31:78.21:863,78,0	1/1:2,18:20:51.14:564,51,0	0/0:29,0:28:71.93:0,72,616	0/0:19,0:19:47.96:0,48,413	0/0:19,0:19:56.97:0,57,491	0/0:33,0:33:86.93:0,87,748	0/0:27,0:27:71.95:0,72,625	0/0:11,0:11:26.97:0,27,234	0/0:14,0:14:38.99:0,39,338	0/0:15,0:15:44.97:0,45,385	0/0:15,0:15:44.97:0,45,386	0/0:22,0:22:62.99:0,63,547	0/0:21,0:21:50.95:0,51,443	0/0:23,0:23:62.98:0,63,547	0/0:25,1:26:38.79:0,39,562	0/0:13,0:13:32.98:0,33,287	0/0:31,2:33:17.62:0,18,611	0/0:27,1:28:38.78:0,39,558	0/0:22,0:22:59.94:0,60,512	0/0:18,1:19:20.80:0,21,405	0/0:28,0:29:61.98:0,62,527	0/0:22,0:22:56.96:0,57,491	0/0:8,0:8:17.99:0,18,156
chr10	45134749	.	C	CTG	1342.96	PASS	AB=0.898;AC=34;AF=0.850;AN=40;BaseQRankSum=1.197;DP=552;FS=11.569;HRun=0;HaplotypeScore=117.4480;InbreedingCoeff=0.2524;MQ=66.86;MQ0=10;MQRankSum=-0.411;QD=3.64;ReadPosRankSum=-0.733;VQSLOD=1.4851;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:39,0:36:11.95:111,12,0	1/1:2,0:2:3.01:41,3,0	./.	./.	1/1:17,0:16:2.99:24,3,0	0/0:14,0:15:2.74:0,3,12	0/1:26,6:35:35.13:35,0,46	./.	1/1:20,0:20:2.93:26,3,0	1/1:15,0:15:7.41:56,7,0	1/1:7,0:6:5.51:68,6,0	0/1:33,0:32:0:0,0,0	1/1:11,0:10:6:54,6,0	1/1:17,0:17:3.01:42,3,0	1/1:28,0:28:9.03:128,9,0	1/1:20,1:20:18.88:174,19,0	1/1:38,0:37:30.64:286,31,0	1/1:16,0:16:9:80,9,0	1/1:16,0:16:9.40:67,9,0	./.	./.	0/0:12,0:11:0.41:0,0,1	1/1:10,0:10:1.25:3,1,0	1/1:21,0:20:17.96:162,18,0	./.	1/1:23,0:22:10.83:81,11,0	./.	./.
chr10	45135104	.	AAC	A	1564.54	PASS	AB=0.714;AC=15;AF=0.268;AN=56;BaseQRankSum=1.100;DP=222;FS=3.181;HRun=0;HaplotypeScore=32.7332;InbreedingCoeff=0.6062;MQ=59.99;MQ0=15;MQRankSum=-4.958;QD=22.04;ReadPosRankSum=0.907;VQSLOD=3.1182;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:7:11.63:0,12,77	0/0:1,0:1:3.01:0,3,57	0/0:14,0:4:7.97:0,8,143	0/0:15,0:7:20.98:0,21,304	1/1:3,3:5:6.02:91,6,0	0/0:2,0:1:3:0,3,25	0/0:5,0:5:8.97:0,9,71	1/1:9,10:10:30.03:391,30,0	0/0:5,0:5:12.02:0,12,125	0/0:7,0:7:21.05:0,21,225	0/0:6,0:6:11.93:0,12,129	0/0:7,0:7:15.02:0,15,151	0/0:4,0:4:6.02:0,6,68	0/0:7,0:7:21.02:0,21,211	0/0:10,0:9:15.01:0,15,149	0/0:11,0:10:21.02:0,21,237	0/0:14,0:12:23.98:0,24,365	0/0:14,0:14:3:0,3,25	1/1:0,6:6:15.01:166,15,0	1/1:1,2:3:3.01:45,3,0	1/1:1,6:7:2.94:18,3,0	0/0:4,0:3:2.87:0,3,34	0/0:2,0:2:6.02:0,6,76	0/0:4,0:4:3.01:0,3,34	0/0:10,0:10:8.04:0,8,73	0/1:3,2:5:24.62:99,0,25	1/1:6,9:14:39.05:523,39,0	1/1:3,7:10:29.99:404,30,0
chr10	45135106	.	C	CAT	958.94	PASS	AB=1.000;AC=25;AF=0.500;AN=50;BaseQRankSum=-4.571;DP=213;FS=3.468;HRun=0;HaplotypeScore=35.8390;InbreedingCoeff=0.5729;MQ=60.18;MQ0=18;MQRankSum=3.500;QD=13.32;ReadPosRankSum=-0.258;VQSLOD=3.0270;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:7:5.27:0,5,20	0/0:1,0:1:3.01:0,3,38	0/0:15,0:4:6.02:0,6,71	0/0:18,0:8:13.04:0,13,174	0/0:6,0:6:5.76:0,6,31	./.	0/0:5,0:5:2.60:0,3,10	0/0:18,0:11:19.17:0,19,84	1/1:5,0:5:5.71:77,6,0	1/1:2,6:7:18.06:255,18,0	1/1:6,0:6:6.02:78,6,0	1/1:5,0:5:5.74:77,6,0	1/1:2,0:2:6.02:77,6,0	1/1:7,0:7:8.75:115,9,0	1/1:7,0:7:12.04:155,12,0	1/1:10,0:9:6.02:71,6,0	0/0:13,0:12:18.04:0,18,211	./.	0/0:6,0:6:5.54:0,6,25	0/0:3,0:3:2.60:0,3,10	./.	1/1:4,0:3:2.90:39,3,0	1/1:2,0:2:3.01:39,3,0	1/1:2,0:2:3.01:39,3,0	1/1:10,0:10:6.02:80,6,0	0/1:4,0:4:16.70:30,0,17	0/0:14,0:13:27.27:0,27,117	0/0:10,0:10:22.40:0,22,107
chr10	45135113	.	A	ATATAT	1175.75	PASS	AB=1.000;AC=24;AF=0.462;AN=52;BaseQRankSum=-6.096;DP=190;FS=4.732;HRun=0;HaplotypeScore=41.2025;InbreedingCoeff=0.4186;MQ=57.83;MQ0=15;MQRankSum=2.902;QD=17.04;ReadPosRankSum=-1.589;VQSLOD=1.7788;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:5:5.27:0,5,20	0/0:1,0:1:3.01:0,3,38	0/0:13,0:4:6.02:0,6,71	0/0:18,0:7:8.71:0,9,168	0/0:7,0:8:14.73:0,15,110	./.	0/0:2,0:2:2.60:0,3,10	0/0:18,0:12:24.98:0,25,117	0/1:3,0:3:2.29:69,0,2	1/1:6,0:6:18.06:255,18,0	1/1:1,5:7:6.02:132,6,0	0/1:3,0:3:12.63:68,0,13	1/1:2,0:2:6.02:77,6,0	0/1:4,0:4:9.71:104,0,10	1/1:6,0:6:12.04:155,12,0	1/1:1,4:6:5.76:168,6,0	0/0:9,0:13:18.06:0,18,230	1/1:12,0:12:2.97:20,3,0	0/0:5,0:5:5.47:0,5,24	0/0:2,0:2:2.60:0,3,10	./.	1/1:2,0:2:2.90:39,3,0	1/1:2,0:2:3.01:39,3,0	1/1:2,0:2:3.01:39,3,0	1/1:0,0:8:6.02:151,6,0	0/1:5,0:4:24.26:30,0,24	0/0:10,0:11:28.77:0,29,130	0/0:10,0:11:20.96:0,21,109
chr10	45135115	.	AT	A	848.52	PASS	AB=0.917;AC=20;AF=0.370;AN=54;BaseQRankSum=-5.060;DP=179;FS=5.035;HRun=2;HaplotypeScore=30.2358;InbreedingCoeff=0.4555;MQ=58.12;MQ0=15;MQRankSum=4.374;QD=20.70;ReadPosRankSum=-0.517;VQSLOD=3.0784;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:4:5.27:0,5,21	0/0:1,0:1:3.01:0,3,38	0/0:14,0:4:6.02:0,6,71	0/0:17,0:7:15.51:0,16,178	0/0:8,0:8:0.93:0,1,20	0/0:2,0:1:3.01:0,3,40	0/0:2,0:2:2.80:0,3,13	0/0:19,0:11:20.47:0,20,87	1/1:0,3:3:9.03:116,9,0	0/1:8,0:7:7.05:172,0,7	1/1:5,0:5:1.26:41,1,0	1/1:0,3:3:9.03:116,9,0	1/1:1,2:3:9.03:113,9,0	1/1:0,4:4:12.04:155,12,0	1/1:0,5:5:12.04:155,12,0	0/0:4,0:4:2.80:0,3,7	0/0:13,0:12:16.29:0,16,190	0/0:12,0:12:3.01:0,3,36	0/0:3,0:3:5.72:0,6,31	0/0:2,0:2:2.60:0,3,10	./.	1/1:0,2:2:3.01:39,3,0	1/1:0,1:1:3.01:39,3,0	1/1:0,2:2:3.01:39,3,0	0/0:8,0:8:2.49:0,2,6	0/1:4,1:4:23.17:29,0,23	0/0:12,0:11:22.52:0,23,139	0/0:10,0:10:28.64:0,29,182
chr10	45135146	.	TTA	T	1429.31	PASS	AB=0.791;AC=14;AF=0.269;AN=52;BaseQRankSum=-0.811;DP=160;FS=5.146;HRun=0;HaplotypeScore=26.9486;InbreedingCoeff=0.4123;MQ=47.72;MQ0=16;MQRankSum=-1.067;QD=20.42;ReadPosRankSum=1.351;VQSLOD=2.8364;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:4:0:0,0,0	0/0:1,0:1:3.01:0,3,37	0/0:8,0:2:5.38:0,5,42	0/0:10,0:3:5.11:0,5,44	1/1:0,8:8:18.06:266,18,0	0/0:5,0:2:6.02:0,6,95	0/0:2,0:1:3.01:0,3,55	0/1:7,18:19:16.90:614,0,17	0/0:1,0:1:3.01:0,3,48	0/0:8,0:6:18.06:0,18,282	0/0:6,0:6:9.03:0,9,126	0/0:1,0:1:3.01:0,3,48	0/0:4,0:3:6.23:0,6,50	0/0:1,0:1:3.01:0,3,48	0/0:2,0:2:6.02:0,6,74	0/0:4,0:4:6.02:0,6,105	0/0:12,0:11:11.63:0,12,201	0/0:9,0:9:12.04:0,12,166	1/1:1,0:1:2.99:23,3,0	1/1:2,0:2:6.02:83,6,0	1/1:7,0:7:9.03:124,9,0	./.	./.	0/0:2,0:2:3.01:0,3,37	0/0:6,0:6:12.04:0,12,177	1/1:5,0:4:12.01:132,12,0	1/1:12,0:11:4.93:267,5,0	0/1:10,0:10:72.81:73,0,90
chr10	45135148	.	A	AT	1536.98	PASS	AB=0.960;AC=15;AF=0.300;AN=50;BaseQRankSum=-0.545;DP=167;FS=0.000;HRun=2;HaplotypeScore=25.0184;InbreedingCoeff=0.5617;MQ=48.66;MQ0=17;MQRankSum=-1.794;QD=20.49;ReadPosRankSum=0.976;VQSLOD=3.3146;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	0/0:1,0:1:3.01:0,3,37	0/0:9,0:2:5.38:0,5,42	0/0:11,0:3:3.90:0,4,39	1/1:8,0:8:16.55:123,17,0	0/0:5,0:2:6.02:0,6,74	0/0:2,0:1:3.01:0,3,37	0/1:23,1:19:21.54:509,0,22	0/0:1,0:1:3.01:0,3,37	0/0:8,0:6:18.06:0,18,221	0/0:7,0:7:8.89:0,9,89	0/0:1,0:1:3.01:0,3,37	0/0:3,0:2:5.97:0,6,56	0/0:2,0:2:6.01:0,6,62	0/0:2,0:2:6.02:0,6,73	0/0:5,0:5:8.39:0,8,54	0/0:11,0:11:13.27:0,13,203	0/0:9,0:9:12.04:0,12,143	1/1:1,1:2:6.01:70,6,0	1/1:0,2:2:6.02:83,6,0	1/1:0,7:7:9.03:124,9,0	./.	./.	0/0:2,0:2:3.01:0,3,37	0/0:6,0:6:11.66:0,12,101	1/1:2,3:4:12.04:169,12,0	1/1:4,12:15:30.10:411,30,0	1/1:5,6:11:15.05:214,15,0
chr10	45135285	.	CGT	C	1437.79	PASS	AB=0.937;AC=16;AF=0.296;AN=54;BaseQRankSum=3.698;DP=545;FS=0.000;HRun=0;HaplotypeScore=90.7700;InbreedingCoeff=0.5471;MQ=54.78;MQ0=17;MQRankSum=-0.204;QD=8.82;ReadPosRankSum=0.435;VQSLOD=3.0395;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:29:5.95:0,6,68	0/0:4,0:4:9.02:0,9,100	./.	0/0:27,0:15:0:0,0,0	0/0:14,0:14:14.53:0,15,108	0/0:10,0:10:13.48:0,13,126	0/0:17,0:18:13.81:0,14,123	0/0:29,0:26:12:0,12,144	0/0:12,0:12:21.06:0,21,240	1/1:11,7:17:15.04:165,15,0	1/1:2,4:6:9.02:99,9,0	0/0:27,1:27:9.94:0,10,518	0/1:12,1:13:11.99:12,0,177	0/0:19,0:19:45.13:0,45,504	1/1:5,18:23:41.47:443,41,0	1/1:4,12:16:39.11:429,39,0	0/1:26,2:27:24:24,0,366	1/1:8,4:13:14.71:127,15,0	0/0:12,0:14:7.26:0,7,72	0/0:8,0:9:12.01:0,12,122	0/0:47,1:54:4.59:0,5,544	0/1:16,1:17:11.99:12,0,187	0/1:15,1:16:9.02:9,0,191	0/0:27,0:27:42.12:0,42,469	1/1:2,9:11:27.07:298,27,0	0/0:20,0:24:29.91:0,30,277	0/0:10,0:13:26.98:0,27,252	0/0:10,0:17:14.88:0,15,195
chr10	45135987	.	T	TG	455.56	PASS	AB=0.976;AC=12;AF=0.214;AN=56;BaseQRankSum=8.698;DP=524;FS=15.162;HRun=0;HaplotypeScore=121.2677;InbreedingCoeff=0.2327;MQ=54.56;MQ0=36;MQRankSum=-4.816;QD=3.40;ReadPosRankSum=4.951;VQSLOD=2.3945;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:12,1:13:13.51:0,14,225	0/0:6,0:6:15.44:0,15,135	0/0:65,0:15:6.56:0,7,177	0/0:105,0:28:26.79:0,27,155	1/1:21,1:20:11.67:104,12,0	1/1:13,0:13:36.84:205,37,0	0/1:7,0:7:4.16:60,0,4	0/1:15,0:13:26.87:27,0,53	0/0:13,0:13:32.16:0,32,280	0/0:18,0:17:30.37:0,30,277	0/0:8,0:8:4.67:0,5,38	0/0:14,0:14:35.86:0,36,287	0/0:14,0:14:37.37:0,37,292	0/0:12,0:12:32.80:0,33,273	0/0:15,0:14:6.54:0,7,160	0/0:16,0:16:25.66:0,26,236	0/0:23,0:23:44.36:0,44,338	0/0:20,0:20:27.69:0,28,234	0/1:16,0:15:23.94:42,0,24	0/1:23,1:24:30.80:73,0,31	0/1:6,0:6:11.47:23,0,11	0/0:10,0:10:23.78:0,24,184	0/0:18,0:18:42.76:0,43,319	0/0:14,0:14:37.95:0,38,294	0/0:6,0:6:12.01:0,12,110	0/1:8,0:8:5.31:27,0,5	0/1:12,0:12:2.95:18,0,3	0/1:9,1:11:32.65:35,0,33
chr10	45136053	.	CT	C	764.91	PASS	AB=0.975;AC=7;AF=0.125;AN=56;BaseQRankSum=0.442;DP=639;FS=0.593;HRun=9;HaplotypeScore=131.0720;InbreedingCoeff=0.8435;MQ=77.92;MQ0=6;MQRankSum=-0.093;QD=6.27;ReadPosRankSum=0.099;VQSLOD=1.0278;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,17:19:38.89:356,39,0	0/0:13,0:13:33.07:0,33,367	0/1:75,1:36:1.70:2,0,374	0/0:67,0:32:22.01:0,22,299	0/0:34,0:34:86.65:0,87,903	1/1:2,8:10:24.01:220,24,0	1/1:2,14:16:36.02:329,36,0	0/0:23,0:25:71.72:0,72,727	0/0:11,0:11:30.08:0,30,336	0/0:24,0:24:57:0,57,636	0/0:29,0:29:69.20:0,69,796	0/0:13,0:13:30.97:0,31,348	0/0:13,0:13:33.10:0,33,381	0/0:16,0:16:45.04:0,45,486	0/0:16,0:16:42.12:0,42,485	0/0:19,0:19:53.15:0,53,573	0/0:22,0:22:57.17:0,57,655	0/0:25,0:25:69.10:0,69,751	0/0:25,0:25:44.61:0,45,487	0/0:35,0:35:99:0,100,986	0/0:2,0:2:3.01:0,3,34	0/0:10,0:10:27.07:0,27,305	0/0:22,0:23:56.96:0,57,623	0/0:12,0:12:33.07:0,33,368	0/0:23,0:23:66.15:0,66,747	0/0:23,0:23:58.37:0,58,642	0/0:23,0:24:66.02:0,66,735	0/0:13,0:13:22.25:0,22,332
chr10	45136553	.	ATGG	A	8063.65	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=14.422;DP=676;FS=16.520;HRun=0;HaplotypeScore=98.5893;InbreedingCoeff=0.9986;MQ=78.42;MQ0=0;MQRankSum=-4.893;QD=40.12;ReadPosRankSum=0.306;VQSLOD=5.1534;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,157,3489	0/0:13,0:13:39.13:0,39,884	0/0:35,0:34:93.32:0,93,2052	0/0:28,0:28:78.27:0,78,1721	1/1:5,26:31:60.20:998,60,0	0/0:16,0:16:48.16:0,48,1088	0/0:16,0:16:48.16:0,48,1088	1/1:2,21:23:60.20:993,60,0	0/0:14,0:14:42.14:0,42,951	0/0:24,0:24:63.22:0,63,1428	0/0:17,0:17:51.16:0,51,1109	0/0:18,0:18:48.16:0,48,1087	0/0:21,0:21:63.22:0,63,1425	0/0:19,0:19:57.20:0,57,1292	0/0:30,0:30:87.30:0,87,1971	0/0:32,0:32:90.31:0,90,2040	0/0:27,0:27:78.27:0,78,1766	0/0:19,0:19:48.12:0,48,1036	1/1:4,20:24:57.19:924,57,0	1/1:2,19:21:54.18:887,54,0	1/1:1,32:33:75.26:1239,75,0	0/0:23,0:23:63.22:0,63,1428	0/0:19,0:19:57.20:0,57,1289	0/0:19,0:19:54.19:0,54,1189	0/0:31,0:31:90.31:0,90,2018	1/1:1,29:30:84.27:1374,84,0	1/1:2,31:33:81.28:1349,81,0	1/1:0,6:6:18.06:300,18,0
chr10	45138364	.	CCT	C	721.70	PASS	AB=0.933;AC=11;AF=0.196;AN=56;BaseQRankSum=-0.023;DP=346;FS=34.770;HRun=0;HaplotypeScore=68.4161;InbreedingCoeff=0.1578;MQ=87.17;MQ0=1;MQRankSum=-0.575;QD=5.31;ReadPosRankSum=5.726;VQSLOD=0.9655;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:20.90:0,21,164	0/1:7,0:7:9.44:9,0,82	0/0:26,0:21:18.51:0,19,216	0/0:17,0:12:10.80:0,11,103	0/0:8,0:8:17.91:0,18,145	0/0:4,0:4:11.94:0,12,93	0/0:6,0:6:17.93:0,18,143	0/0:7,0:7:11.52:0,12,129	1/1:15,0:15:10.54:146,11,0	0/0:20,0:20:15.80:0,16,241	0/0:8,0:8:9.40:0,9,67	0/1:19,0:19:73.49:74,0,73	0/1:14,2:16:17.41:138,0,17	0/1:23,2:25:19.18:212,0,19	0/1:17,0:17:3.32:3,0,73	0/0:21,0:21:28.52:0,29,131	0/0:21,0:21:42.99:0,43,281	0/0:19,0:19:6.61:0,7,58	0/0:4,0:4:8.98:0,9,72	0/0:5,0:5:9.50:0,9,102	0/0:11,0:11:11.81:0,12,132	0/1:3,2:5:8.69:77,0,9	0/1:17,0:16:17.51:18,0,89	1/1:14,1:15:37.38:195,37,0	0/0:12,0:12:14.78:0,15,88	0/0:4,0:4:5.99:0,6,54	0/0:6,0:6:4.99:0,5,97	0/0:2,0:2:5.99:0,6,47
chr10	45138366	.	TCC	T	2811.49	PASS	AB=0.850;AC=28;AF=0.500;AN=56;BaseQRankSum=-4.698;DP=340;FS=4.965;HRun=11;HaplotypeScore=61.6538;InbreedingCoeff=0.7226;MQ=88.52;MQ0=1;MQRankSum=-0.396;QD=13.14;ReadPosRankSum=6.743;VQSLOD=1.2759;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:8:11.82:0,12,93	0/1:4,1:7:14.35:22,0,14	0/0:28,0:23:13.45:0,13,124	0/0:18,0:12:3.53:0,4,40	0/0:6,0:6:2.79:0,3,36	0/0:4,0:4:5.92:0,6,39	0/0:7,0:7:5.85:0,6,35	0/0:6,0:6:6.88:0,7,52	1/1:1,14:15:36.09:383,36,0	1/1:6,0:19:22.98:113,23,0	1/1:1,0:7:13.72:60,14,0	1/1:6,13:19:26.90:287,27,0	1/1:4,10:14:24.04:253,24,0	1/1:5,19:24:54.10:574,54,0	1/1:4,0:15:29.80:131,30,0	1/1:2,0:21:52.14:227,52,0	0/0:12,0:21:31.79:0,32,156	1/1:1,0:20:26.50:134,27,0	0/0:4,0:4:2.80:0,3,13	0/0:5,0:5:8.91:0,9,64	0/0:11,0:11:8.94:0,9,67	1/1:3,2:5:12.03:126,12,0	1/1:5,11:15:18.02:192,18,0	1/1:1,14:15:42.11:447,42,0	1/1:3,0:13:9.62:62,10,0	0/1:4,0:4:0:0,0,0	0/0:6,0:6:9.31:0,9,51	0/0:2,0:2:3:0,3,25
chr10	45138947	.	TGATAA	T	808.53	PASS	AB=0.720;AC=6;AF=0.107;AN=56;BaseQRankSum=7.735;DP=472;FS=23.226;HRun=0;HaplotypeScore=101.5450;InbreedingCoeff=-0.1210;MQ=87.44;MQ0=0;MQRankSum=-5.275;QD=14.18;ReadPosRankSum=0.574;VQSLOD=1.1904;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:40:99:0,117,3613	0/0:6,0:6:18.06:0,18,576	0/0:12,0:12:18.19:0,18,926	0/0:28,0:27:60.36:0,60,2236	0/0:7,0:7:18.06:0,18,598	0/0:29,0:29:84.29:0,84,2645	0/0:28,0:28:84.27:0,84,2605	0/0:20,0:20:60.18:0,60,1907	0/0:14,0:14:42.14:0,42,1399	0/0:13,0:13:39.13:0,39,1276	0/0:15,0:15:45.15:0,45,1498	0/0:24,0:24:69.21:0,69,2146	0/0:14,0:14:42.14:0,42,1346	0/0:16,0:16:48.16:0,48,1490	0/0:18,0:18:54.16:0,54,1477	0/0:13,0:13:39.12:0,39,1202	0/0:27,0:27:75.16:0,75,2151	0/0:17,0:17:48.16:0,48,1599	0/1:2,2:4:99:116,0,138	0/1:4,3:7:99:170,0,377	0/1:9,5:14:68.13:68,0,866	0/0:12,0:12:36.12:0,36,1199	0/0:12,0:12:36.11:0,36,1065	0/0:30,0:30:90.31:0,90,2892	0/0:18,0:18:54.16:0,54,1649	0/1:12,6:18:99:329,0,1120	0/1:3,2:5:93.27:93,0,284	0/1:6,3:9:99:157,0,513
chr10	45138971	.	G	GA	291.76	PASS	AB=0.807;AC=5;AF=0.089;AN=56;BaseQRankSum=5.786;DP=447;FS=5.942;HRun=0;HaplotypeScore=61.4052;InbreedingCoeff=-0.1028;MQ=78.21;MQ0=3;MQRankSum=-4.695;QD=5.12;ReadPosRankSum=-0.438;VQSLOD=2.5802;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,111,1517	0/0:5,0:5:12.04:0,12,167	0/0:17,0:14:29.16:0,29,374	0/0:32,0:22:56.35:0,56,597	0/0:10,0:10:30.10:0,30,419	0/0:28,0:28:84.26:0,84,1154	0/0:29,0:29:87.28:0,87,1198	0/0:17,0:16:45.15:0,45,630	0/0:13,0:13:39.12:0,39,528	0/0:14,0:14:42.14:0,42,588	0/0:10,0:10:9.10:0,9,357	0/0:23,0:23:69.23:0,69,963	0/0:11,0:11:33.11:0,33,461	0/0:9,0:9:27.08:0,27,361	0/0:10,0:10:30.10:0,30,420	0/0:12,0:12:36.11:0,36,487	0/0:22,0:22:66.22:0,66,923	0/0:18,0:18:54.18:0,54,755	0/1:4,1:5:32.75:33,0,153	0/1:4,3:7:99:125,0,107	0/1:14,5:19:91.51:92,0,531	0/0:9,0:9:27.09:0,27,377	0/0:9,0:8:24.07:0,24,319	0/0:29,0:29:87.25:0,87,1194	0/0:20,0:20:57.19:0,57,797	0/1:12,4:16:99:142,0,455	0/0:4,0:4:12.04:0,12,168	0/1:9,1:10:17.50:18,0,347
chr10	45139257	.	CAAAAA	C	3490.14	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=3.662;DP=500;FS=9.146;HRun=16;HaplotypeScore=95.9424;InbreedingCoeff=0.9546;MQ=68.84;MQ0=11;MQRankSum=-4.591;QD=26.05;ReadPosRankSum=4.044;VQSLOD=2.1101;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:40:99:0,100,2178	0/0:2,0:4:8.99:0,9,137	0/0:42,0:13:14.01:0,14,142	0/0:30,0:13:20.61:0,21,210	1/1:5,0:20:41.32:372,41,0	0/0:15,0:16:33.09:0,33,667	0/0:20,0:25:60.19:0,60,1323	1/1:9,16:27:26.33:664,26,0	0/0:14,0:15:33.11:0,33,769	0/0:5,0:20:50.59:0,51,893	0/0:5,0:10:24.08:0,24,414	0/0:10,0:12:36.12:0,36,858	0/0:11,0:14:33.11:0,33,728	0/0:12,0:12:30.10:0,30,707	0/0:6,0:14:30.09:0,30,463	0/0:7,0:14:27.08:0,27,497	0/0:32,0:35:81.23:0,81,1949	0/0:12,0:24:63.19:0,63,1050	1/1:5,13:16:39.06:580,39,0	1/1:4,10:14:23.95:373,24,0	1/1:4,10:14:11.93:169,12,0	0/0:2,0:2:6.02:0,6,126	0/0:8,0:10:21.07:0,21,412	0/0:11,0:11:27.09:0,27,672	0/0:6,0:14:39.11:0,39,647	1/1:2,19:21:57.12:865,57,0	1/1:5,9:14:17.09:279,17,0	1/1:0,6:6:12.04:187,12,0
chr10	45139966	.	A	AG	19052.60	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-18.279;DP=736;FS=6.768;HRun=2;HaplotypeScore=64.5722;InbreedingCoeff=0.9999;MQ=94.96;MQ0=0;MQRankSum=-7.440;QD=41.42;ReadPosRankSum=0.577;VQSLOD=4.9373;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:1,31:32:81.27:1214,81,0	0/0:11,0:11:33.11:0,33,429	0/0:40,0:40:99:0,111,1392	0/0:27,0:27:69.05:0,69,863	1/1:1,20:21:57.19:854,57,0	1/1:0,17:17:48.16:720,48,0	1/1:1,26:27:78.26:1169,78,0	1/1:1,38:40:99:1641,111,0	0/0:15,0:15:45.14:0,45,571	1/1:3,34:37:99:1559,105,0	1/1:0,16:16:45.15:674,45,0	0/0:23,0:23:66.21:0,66,857	0/0:31,0:31:93.30:0,93,1207	0/0:32,0:32:93.30:0,93,1204	1/1:0,33:33:93.32:1394,93,0	1/1:0,35:35:99:1529,102,0	0/0:22,0:22:63.20:0,63,818	1/1:0,12:12:33.11:495,33,0	1/1:0,20:20:57.19:854,57,0	1/1:1,31:32:81.23:1189,81,0	1/1:2,40:42:99:1616,108,0	0/0:23,0:23:66.20:0,66,842	0/0:31,0:31:90.29:0,90,1167	0/0:21,0:21:63.19:0,63,803	1/1:0,20:20:57.19:854,57,0	1/1:0,25:25:72.22:1057,72,0	1/1:1,31:32:96.32:1424,96,0	1/1:0,18:18:54.18:809,54,0
chr10	45140368	.	TACAG	T	6921.21	PASS	AB=0.517;AC=11;AF=0.196;AN=56;BaseQRankSum=9.382;DP=779;FS=3.017;HRun=0;HaplotypeScore=132.9316;InbreedingCoeff=0.9145;MQ=70.83;MQ0=1;MQRankSum=-1.092;QD=40.47;ReadPosRankSum=3.210;VQSLOD=5.4136;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,102,2545	0/0:15,0:15:36.12:0,36,929	0/0:37,0:37:90.31:0,90,2152	0/0:22,0:22:48.16:0,48,1197	0/0:36,0:36:99:0,99,2485	0/0:30,0:30:87.27:0,87,2097	0/0:32,0:32:81.25:0,81,1986	0/0:31,0:31:81.28:0,81,2061	0/0:33,0:33:84.24:0,84,2008	1/1:5,18:23:57.20:1014,57,0	1/1:3,24:26:60.16:1026,60,0	0/0:29,0:29:87.30:0,87,2245	0/0:20,0:20:57.18:0,57,1400	0/0:36,0:36:96.33:0,96,2468	1/1:8,36:44:93.32:1651,93,0	1/1:1,19:20:54.18:957,54,0	0/0:19,0:19:57.18:0,57,1418	0/1:2,29:30:5.08:1156,0,5	0/0:20,0:20:51.17:0,51,1266	0/0:33,0:33:99:0,99,2284	0/0:31,0:31:90.31:0,90,2310	0/0:17,0:17:45.15:0,45,1152	0/0:25,0:25:69.24:0,69,1717	0/0:26,0:26:72.25:0,72,1841	1/1:1,25:26:63.22:1118,63,0	0/0:29,1:30:30.86:0,31,1963	0/0:38,0:37:99:0,108,2696	0/0:8,0:8:24.08:0,24,580
chr10	45140820	.	TGG	T	5762.45	PASS	AB=0.763;AC=33;AF=0.589;AN=56;BaseQRankSum=4.074;DP=550;FS=31.765;HRun=11;HaplotypeScore=109.3348;InbreedingCoeff=0.8362;MQ=64.95;MQ0=2;MQRankSum=-3.059;QD=14.81;ReadPosRankSum=7.717;VQSLOD=0.8535;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:20,3:29:74.97:75,0,77	0/0:7,0:9:15.03:0,15,206	0/0:21,0:18:26.92:0,27,294	0/0:11,0:10:18.37:0,18,127	1/1:2,0:24:52.93:228,53,0	0/0:10,0:12:14.49:0,14,129	0/0:19,1:20:0.59:0,1,285	1/1:6,0:28:54.92:241,55,0	1/1:2,13:15:36.09:383,36,0	0/0:8,0:8:3:0,3,27	0/0:8,0:8:6:0,6,52	1/1:6,22:29:71.91:744,72,0	1/1:6,18:24:57.10:587,57,0	1/1:4,15:18:39.04:402,39,0	0/0:20,0:20:15.49:0,15,171	0/0:13,0:13:15:0,15,149	1/1:5,26:31:68.88:714,69,0	0/0:13,0:14:20.11:0,20,220	1/1:3,0:15:30.23:133,30,0	1/1:5,0:24:49.45:209,49,0	1/1:5,0:23:30.81:136,31,0	1/1:6,8:14:30:304,30,0	1/1:6,15:21:36.07:382,36,0	1/1:8,26:34:69.14:734,69,0	0/0:18,0:22:20.49:0,20,215	1/1:7,0:23:46.64:204,47,0	1/1:5,0:25:49.39:215,49,0	1/1:1,0:10:16.46:72,16,0
chr10	45140830	.	GGT	G	1346.95	PASS	AB=0.897;AC=13;AF=0.232;AN=56;BaseQRankSum=-0.867;DP=508;FS=18.920;HRun=0;HaplotypeScore=117.7302;InbreedingCoeff=0.6272;MQ=71.62;MQ0=2;MQRankSum=1.323;QD=7.52;ReadPosRankSum=8.841;VQSLOD=1.4535;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:31,1:32:15.50:0,15,354	0/0:7,0:7:15.05:0,15,238	0/0:28,1:23:47.50:0,47,559	0/0:14,0:14:21.33:0,21,269	0/0:23,0:23:40.50:0,41,152	0/0:10,0:10:23.92:0,24,245	0/0:18,0:18:43.83:0,44,518	0/0:25,0:25:46.81:0,47,190	0/1:19,1:20:79.56:104,0,80	0/0:6,0:6:15.02:0,15,151	0/0:5,0:5:14.98:0,15,149	1/1:25,3:28:13.63:315,14,0	1/1:21,3:24:8.81:292,9,0	0/1:17,2:18:25.55:130,0,26	0/0:12,0:12:21.03:0,21,255	0/0:9,0:9:17.85:0,18,223	1/1:29,0:27:4.17:230,4,0	0/0:11,0:11:23.96:0,24,301	0/0:16,0:16:28.67:0,29,167	0/0:21,0:21:41.32:0,41,180	0/0:20,0:20:33.81:0,34,158	0/1:12,3:15:52.04:111,0,52	1/1:15,1:16:27.96:116,28,0	1/1:27,1:28:37.10:223,37,0	0/0:18,0:18:35.80:0,36,370	0/0:18,0:18:10.91:0,11,61	0/0:24,0:22:18.51:0,19,144	0/0:11,0:11:27.94:0,28,147
chr10	45141437	.	A	ATTTT	3624.89	PASS	AB=0.718;AC=23;AF=0.411;AN=56;BaseQRankSum=0.046;DP=565;FS=5.463;HRun=12;HaplotypeScore=117.6274;InbreedingCoeff=0.7564;MQ=67.49;MQ0=0;MQRankSum=0.725;QD=13.23;ReadPosRankSum=-4.340;VQSLOD=0.0092;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:7,3:31:35.24:510,35,0	0/0:10,0:10:27.01:0,27,336	0/1:12,0:11:7.61:8,0,104	0/0:7,0:7:14.49:0,14,125	1/1:2,0:19:46.54:342,47,0	1/1:6,9:17:27.09:526,27,0	1/1:6,4:12:22.89:415,23,0	0/1:19,0:36:44.60:69,0,45	0/0:7,0:23:20.82:0,21,116	0/0:17,0:17:32.81:0,33,420	0/0:28,0:28:62.86:0,63,803	0/0:1,0:10:9.93:0,10,24	0/0:5,0:22:13.54:0,14,34	0/0:2,0:17:15.14:0,15,38	0/0:20,0:21:24.30:0,24,536	0/0:16,0:17:38.91:0,39,481	0/0:40,0:40:99:0,99,1284	0/0:17,0:19:30.88:0,31,362	1/1:3,0:15:35.54:291,36,0	1/1:10,0:36:80.99:617,81,0	1/1:4,0:14:17.55:102,18,0	0/1:3,0:18:9.84:35,0,10	0/0:6,0:17:4.90:0,5,16	0/0:3,0:23:26.62:0,27,98	0/0:17,0:19:44.93:0,45,537	1/1:4,0:24:11.29:279,11,0	1/1:3,0:20:20.56:142,21,0	1/1:1,0:19:45:289,45,0
chr10	45141631	.	TA	T	989	PASS	AB=0.840;AC=17;AF=0.304;AN=56;BaseQRankSum=1.720;DP=456;FS=1.628;HRun=13;HaplotypeScore=64.7763;InbreedingCoeff=0.5052;MQ=74.93;MQ0=1;MQRankSum=1.069;QD=5.12;ReadPosRankSum=2.342;VQSLOD=2.0239;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:3,0:10:14.33:0,14,77	0/1:5,2:7:6.89:7,0,102	0/1:26,3:21:75.86:76,0,93	0/0:11,0:9:13.30:0,13,96	0/0:16,1:17:20.15:0,20,350	0/0:6,0:17:23.29:0,23,151	0/0:6,0:20:35.96:0,36,216	0/0:15,1:16:19.95:0,20,324	1/1:6,4:12:21.87:139,22,0	0/0:14,0:15:35.87:0,36,314	0/0:12,2:14:8.14:0,8,231	1/1:9,7:17:25.03:176,25,0	0/1:8,2:10:0.91:1,0,145	0/1:7,12:19:2.30:148,0,2	0/1:10,1:11:10.30:10,0,168	0/0:14,2:17:22.99:0,23,350	0/0:25,1:29:31.93:0,32,428	0/0:21,0:21:38.88:0,39,321	0/0:9,0:11:8.38:0,8,200	0/1:16,1:17:4.65:5,0,257	0/0:12,0:12:29.21:0,29,250	1/1:6,12:20:36.85:252,37,0	1/1:1,10:11:29.82:219,30,0	1/1:5,10:16:19.33:133,19,0	0/1:18,3:23:3.09:3,0,395	0/0:16,1:18:22.98:0,23,361	0/0:21,0:25:26.58:0,27,306	0/0:9,0:10:23.87:0,24,218
chr10	45142108	.	T	TTTACTTACTTACTTAC	8728.84	PASS	AC=20;AF=0.370;AN=54;BaseQRankSum=-1.969;DP=385;FS=5.651;HRun=0;HaplotypeScore=164.4290;InbreedingCoeff=0.9044;MQ=56.35;MQ0=1;MQRankSum=-7.446;QD=51.35;ReadPosRankSum=-4.499;VQSLOD=3.3703;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,0:15:3.01:197,3,0	0/0:5,0:5:12.04:0,12,384	0/0:11,0:10:21.03:0,21,476	0/0:5,0:4:3.01:0,3,38	1/1:10,11:22:21.07:1205,21,0	1/1:8,0:8:19.78:700,20,0	./.	1/1:32,0:30:36.11:1296,36,0	0/0:18,0:18:39.13:0,39,1567	0/0:15,0:15:30.10:0,30,1072	0/0:8,0:8:20.99:0,21,612	0/0:15,0:15:42.13:0,42,1522	0/0:10,0:10:24.08:0,24,892	0/0:17,0:17:45.14:0,45,1761	0/0:19,0:19:42.14:0,42,1447	0/0:6,0:6:18.06:0,18,717	0/0:10,0:10:21.07:0,21,831	0/0:17,0:17:39.07:0,39,1283	1/1:12,0:12:24.08:876,24,0	1/1:13,6:21:23.93:1410,24,0	1/1:12,0:12:6.02:331,6,0	0/0:15,0:15:33.11:0,33,1098	0/0:20,0:20:42.12:0,42,1427	0/0:9,0:9:12.04:0,12,390	0/0:15,0:15:42.13:0,42,1698	1/1:17,5:23:15.04:749,15,0	1/1:19,0:19:26.92:1276,27,0	1/1:1,4:6:9.03:689,9,0
chr10	45142126	.	T	TAC	342.15	PASS	AB=0.928;AC=7;AF=0.125;AN=56;BaseQRankSum=7.912;DP=304;FS=17.525;HRun=0;HaplotypeScore=70.1899;InbreedingCoeff=0.1284;MQ=74.03;MQ0=0;MQRankSum=-5.802;QD=6.00;ReadPosRankSum=-0.669;VQSLOD=1.2000;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:7.53:0,8,163	0/0:6,0:6:18.06:0,18,292	0/0:14,0:15:35.81:0,36,520	0/0:10,0:8:9.95:0,10,113	0/1:14,0:14:99:218,0,153	0/0:8,0:8:5.07:0,5,91	0/0:1,0:1:3.01:0,3,48	0/0:14,0:14:27.90:0,28,358	0/0:13,0:13:39.13:0,39,633	0/0:13,0:13:39.13:0,39,633	0/0:9,0:9:27.09:0,27,437	0/0:18,0:18:54.17:0,54,851	0/0:10,0:10:30.10:0,30,485	0/0:17,0:17:51.17:0,51,828	0/0:15,0:15:45.15:0,45,709	0/0:6,0:6:18.06:0,18,292	0/0:8,0:8:24.08:0,24,391	0/0:15,0:15:45.07:0,45,631	0/0:6,0:6:15.04:0,15,184	0/1:10,0:10:99:103,0,134	0/1:4,3:7:30.78:31,0,177	0/0:13,0:13:39.13:0,39,633	0/0:16,0:16:48.14:0,48,734	0/0:7,0:7:21.05:0,21,315	0/0:17,0:17:51.17:0,51,830	0/1:5,0:5:9.56:47,0,10	0/1:15,1:16:17.41:17,0,450	1/1:5,0:5:8.87:57,9,0
chr10	45142276	.	C	CT	7407.67	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-9.565;DP=444;FS=2.920;HRun=8;HaplotypeScore=42.7783;InbreedingCoeff=0.9866;MQ=75.04;MQ0=0;MQRankSum=-2.201;QD=27.85;ReadPosRankSum=0.864;VQSLOD=5.2363;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,41:41:99:1281,111,0	0/0:4,0:4:12.01:0,12,110	0/0:9,0:10:19.91:0,20,152	0/0:13,0:13:17.04:0,17,220	1/1:1,13:14:36.11:413,36,0	1/1:0,12:12:27.08:312,27,0	1/1:2,14:16:42.12:485,42,0	1/1:5,17:22:51.15:589,51,0	0/0:18,0:18:54.03:0,54,494	1/1:2,11:13:33.10:381,33,0	1/1:0,6:6:18.01:193,18,0	0/0:21,0:21:57.02:0,57,521	0/0:20,0:20:57.03:0,57,521	0/0:16,0:16:45.02:0,45,411	1/1:0,14:14:33.10:381,33,0	1/1:0,14:14:36.11:413,36,0	0/0:27,0:27:75.01:0,75,679	1/1:0,14:15:35.97:395,36,0	1/1:4,15:19:45.12:509,45,0	1/1:3,9:12:27.08:312,27,0	1/1:3,18:21:45.13:519,45,0	0/0:9,0:9:24.01:0,24,220	0/0:14,0:14:33.01:0,33,302	0/0:26,0:26:69.02:0,69,625	1/1:3,14:17:39.12:450,39,0	1/1:0,10:10:23.31:261,23,0	1/1:1,15:16:33.10:378,33,0	1/1:0,4:4:12.04:138,12,0
chr10	45143381	.	C	CTT	4270.63	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-12.701;DP=731;FS=17.213;HRun=6;HaplotypeScore=85.4281;InbreedingCoeff=0.9965;MQ=83.37;MQ0=1;MQRankSum=-5.441;QD=39.54;ReadPosRankSum=1.560;VQSLOD=3.4632;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,46:52:99:2191,132,0	0/0:9,0:9:27.08:0,27,328	0/0:14,0:14:30.04:0,30,340	0/0:32,0:32:52.57:0,53,581	0/0:19,0:19:51.16:0,51,621	1/1:5,17:22:48.16:812,48,0	1/1:6,27:33:75.26:1268,75,0	0/0:33,0:33:81.24:0,81,988	0/0:34,0:34:93.29:0,93,1134	0/0:28,0:28:81.25:0,81,987	0/0:15,0:15:39.12:0,39,475	0/0:24,0:24:57.16:0,57,695	0/0:26,0:26:75.24:0,75,915	0/0:34,0:34:84.20:0,84,987	0/0:26,0:26:69.21:0,69,841	0/0:42,0:42:99:0,114,1366	0/0:32,0:32:87.25:0,87,1046	0/0:19,0:19:48.05:0,48,554	0/0:13,0:13:36.10:0,36,429	0/0:18,0:18:51.15:0,51,622	0/0:54,0:54:99:0,144,1728	0/0:24,0:24:66.19:0,66,793	0/0:17,0:16:45.14:0,45,549	0/0:37,0:37:99:0,108,1318	0/0:20,0:20:54.16:0,54,659	0/0:24,0:24:66.20:0,66,805	0/0:21,0:21:51.16:0,51,622	0/0:8,0:7:18.06:0,18,220
chr10	45143641	.	A	AG	140.07	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=3.845;DP=499;FS=10.688;HRun=0;HaplotypeScore=93.0908;InbreedingCoeff=0.5143;MQ=40.75;MQ0=21;MQRankSum=-1.796;QD=2.92;ReadPosRankSum=3.477;VQSLOD=2.0720;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:28,5:32:9.69:223,10,0	0/0:11,0:10:19.73:0,20,136	0/1:15,0:2:8.57:9,0,20	0/0:28,0:5:5.07:0,5,27	0/0:28,0:27:62.17:0,62,416	0/0:16,0:16:43.95:0,44,309	0/0:14,0:13:28.75:0,29,189	0/0:29,0:26:60.54:0,61,470	0/0:12,0:10:29.15:0,29,209	0/0:14,0:14:18.30:0,18,129	0/0:18,0:18:38.57:0,39,250	0/0:13,0:13:27.91:0,28,178	0/0:8,0:7:9.45:0,9,71	0/0:12,0:11:14.94:0,15,117	0/0:10,0:9:14.74:0,15,107	0/0:24,0:23:22.36:0,22,165	0/0:22,0:18:32.32:0,32,220	0/0:27,0:24:11.93:0,12,93	0/0:19,0:17:50.11:0,50,387	0/0:18,0:18:42.04:0,42,303	0/0:12,0:10:27.27:0,27,203	0/0:12,0:12:34.09:0,34,229	0/0:14,0:10:27.32:0,27,180	0/0:11,0:10:11.89:0,12,90	0/0:22,0:21:29.42:0,29,194	0/0:16,0:16:34.97:0,35,229	0/0:20,0:19:50.85:0,51,381	0/0:21,0:19:46.86:0,47,344
chr10	45143642	.	AAAAAAAAAAAAG	A	2303.38	PASS	AB=0.881;AC=13;AF=0.232;AN=56;BaseQRankSum=4.883;DP=506;FS=7.362;HRun=0;HaplotypeScore=150.2659;InbreedingCoeff=0.2534;MQ=40.81;MQ0=21;MQRankSum=-3.495;QD=11.24;ReadPosRankSum=2.744;VQSLOD=1.9178;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:36,0:35:89.44:1251,89,0	0/0:11,0:10:19.88:0,20,505	0/0:18,0:3:8.73:0,9,103	0/0:29,0:5:8.96:0,9,51	0/0:28,0:27:23:0,23,407	0/0:16,0:16:42.07:0,42,802	0/0:14,0:13:25.83:0,26,515	0/0:29,0:26:10.24:0,10,462	0/0:12,0:10:27.02:0,27,564	1/1:3,11:14:15.95:336,16,0	0/1:18,0:18:15.95:209,0,16	0/0:13,0:13:32.34:0,32,524	0/0:8,0:7:12.01:0,12,244	0/0:12,0:11:12.04:0,12,225	1/1:10,0:9:0.26:102,0,0	0/1:8,16:23:5.66:158,0,6	0/0:22,0:18:36.06:0,36,969	0/1:6,20:24:7.37:86,0,7	0/0:19,0:17:39.91:0,40,304	0/1:18,0:18:17.57:18,0,218	0/0:12,0:10:26.98:0,27,166	0/0:13,0:13:37.67:0,38,580	0/0:14,0:10:27.06:0,27,442	0/0:11,0:10:13.76:0,14,198	0/1:22,0:21:41.06:211,0,41	0/1:17,0:17:70.79:73,0,71	0/0:20,0:19:22.48:0,22,361	0/1:20,0:19:20.85:21,0,233
chr10	45143643	.	AAAAAAAAAAAG	A	2236.07	PASS	AB=0.972;AC=16;AF=0.286;AN=56;BaseQRankSum=4.852;DP=514;FS=17.317;HRun=0;HaplotypeScore=144.6224;InbreedingCoeff=-0.0749;MQ=42.36;MQ0=23;MQRankSum=-1.504;QD=7.50;ReadPosRankSum=1.018;VQSLOD=1.8518;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:36,0:36:85.45:1081,85,0	0/0:11,0:10:19.61:0,20,462	0/0:19,0:3:8.92:0,9,107	0/0:32,0:6:9.18:0,9,53	0/1:28,0:27:32.23:32,0,253	0/0:16,0:16:42.02:0,42,684	0/0:14,0:13:8.17:0,8,428	0/1:29,0:26:21.11:21,0,317	0/0:12,0:10:24.03:0,24,509	1/1:14,0:14:17.40:269,17,0	0/1:18,0:18:29.48:161,0,29	0/0:13,0:13:32.70:0,33,474	0/0:8,0:7:12:0,12,203	0/0:12,0:11:12.04:0,12,219	0/1:10,0:9:23.88:39,0,24	0/1:24,0:23:33:128,0,33	0/0:22,0:18:36.04:0,36,889	0/1:25,0:23:14.25:70,0,14	0/0:19,0:17:11.67:0,12,171	0/1:20,0:20:99:120,0,140	0/1:13,0:11:17.73:18,0,54	0/0:13,0:13:20.60:0,21,481	0/0:14,0:10:25.84:0,26,365	0/0:11,0:10:13.55:0,14,190	0/1:13,9:21:67.91:177,0,68	0/1:18,0:18:51.95:165,0,52	0/1:20,0:19:42.08:42,0,187	0/1:19,1:18:84.64:85,0,113
chr10	45143653	.	AG	A	2460.78	PASS	AB=0.960;AC=37;AF=0.661;AN=56;BaseQRankSum=2.441;DP=487;FS=19.838;HRun=1;HaplotypeScore=82.0666;InbreedingCoeff=0.3830;MQ=46.23;MQ0=23;MQRankSum=-5.444;QD=6.80;ReadPosRankSum=1.110;VQSLOD=-0.6660;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:41,0:41:40.57:224,0,41	0/0:13,0:12:16.68:0,17,126	0/0:28,0:6:17.24:0,17,125	0/0:39,0:10:0.03:0,0,37	1/1:23,0:21:35.62:233,36,0	1/1:9,0:9:22.35:113,22,0	1/1:13,0:13:3.69:61,4,0	1/1:25,0:22:46.93:314,47,0	0/1:11,0:9:2.44:2,0,73	1/1:13,0:13:9.85:89,10,0	1/1:13,0:13:23.81:147,24,0	0/1:12,2:14:27.92:28,0,94	0/0:9,0:8:8.73:0,9,57	0/1:11,1:11:8.03:8,0,46	0/1:9,0:8:0.79:64,0,1	1/1:21,0:20:9.39:45,9,0	0/0:25,0:22:41.28:0,41,332	1/1:21,0:21:5.67:37,6,0	1/1:17,0:15:8.18:186,8,0	1/1:16,0:16:29.06:197,29,0	1/1:13,0:11:24.74:150,25,0	0/1:11,1:12:28.24:28,0,94	0/1:14,0:10:7.48:7,0,77	0/0:11,0:10:4.81:0,5,37	1/1:18,0:17:8.65:77,9,0	1/1:16,0:16:39.83:308,40,0	1/1:21,0:20:22.95:231,23,0	1/1:10,0:8:15.49:90,15,0
chr10	45144546	.	AACACAT	A	10124.93	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=13.073;DP=712;FS=2.011;HRun=0;HaplotypeScore=160.4079;InbreedingCoeff=0.9989;MQ=71.85;MQ0=0;MQRankSum=-17.043;QD=57.53;ReadPosRankSum=2.295;VQSLOD=4.9203;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:62,0:62:99:0,184,5901	0/0:13,0:13:39.13:0,39,1453	0/0:12,0:12:22.47:0,22,534	0/0:18,0:18:30.31:0,30,761	0/0:17,0:17:48.16:0,48,1741	0/0:26,0:26:78.27:0,78,2835	0/0:29,0:29:87.27:0,87,2990	0/0:19,0:19:57.20:0,57,2067	1/1:0,26:26:63.18:1608,63,0	0/0:31,0:31:93.31:0,93,3287	0/0:11,0:11:30.10:0,30,1127	1/1:0,32:32:75.26:1882,75,0	1/1:0,28:28:66.23:1682,66,0	1/1:0,27:27:75.26:1910,75,0	0/0:28,0:28:84.27:0,84,2882	0/0:21,0:21:63.22:0,63,2339	0/0:43,0:43:99:0,129,4319	0/0:34,0:34:99:0,102,3397	0/0:18,0:18:51.18:0,51,1880	0/0:18,0:18:51.17:0,51,1760	0/0:52,0:52:99:0,157,5523	1/1:0,26:26:63.22:1600,63,0	1/1:0,15:15:33.11:838,33,0	1/1:0,22:22:24.55:605,25,0	0/0:16,0:16:48.12:0,48,1677	0/0:29,0:29:87.30:0,87,3224	0/0:27,0:27:81.23:0,81,2798	0/0:12,0:12:36.12:0,36,1341
chr10	45144756	.	AT	A	556.11	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.659;DP=727;FS=5.178;HRun=10;HaplotypeScore=89.1165;InbreedingCoeff=0.9511;MQ=74.29;MQ0=0;MQRankSum=-1.401;QD=17.94;ReadPosRankSum=-0.025;VQSLOD=3.9942;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,30:31:74.98:651,75,0	0/0:11,0:11:26.85:0,27,271	0/0:28,1:28:10.21:0,10,443	0/0:22,0:19:27.94:0,28,391	0/0:31,0:32:81.07:0,81,866	0/0:25,0:26:74.99:0,75,790	0/0:20,0:19:57.14:0,57,621	0/0:37,0:39:90.03:0,90,944	0/0:21,0:21:45.10:0,45,482	0/0:32,0:33:84.06:0,84,910	0/0:17,1:19:27.97:0,28,519	0/0:32,0:33:80.99:0,81,848	0/0:11,0:11:30.08:0,30,331	0/0:27,0:27:54.82:0,55,741	0/0:23,0:23:57.11:0,57,617	0/0:26,0:27:65.95:0,66,681	0/0:23,0:23:57.14:0,57,621	0/0:33,0:33:84.20:0,84,911	0/0:31,2:33:61.12:0,61,876	0/0:38,1:39:67.19:0,67,961	0/0:19,0:19:45.07:0,45,476	0/0:23,0:23:57.13:0,57,619	0/0:23,0:24:50.96:0,51,538	0/0:31,1:32:58.17:0,58,870	0/0:28,0:28:64.41:0,64,690	0/0:29,2:31:23.03:0,23,684	0/0:24,0:24:63.17:0,63,697	0/0:13,0:13:33.07:0,33,355
chr10	45144863	.	GCA	G	253.88	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=2.735;DP=822;FS=6.891;HRun=0;HaplotypeScore=202.0431;InbreedingCoeff=0.9679;MQ=56.98;MQ0=19;MQRankSum=-1.042;QD=5.29;ReadPosRankSum=-2.867;VQSLOD=1.8457;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:9,12:17:14.53:137,15,0	0/0:8,0:8:24:0,24,430	0/0:61,1:23:64.92:0,65,1026	0/0:56,0:23:34.85:0,35,751	0/0:23,0:23:42.14:0,42,818	1/1:4,7:10:11.91:116,12,0	1/1:6,10:13:11.91:133,12,0	0/0:34,0:33:99:0,99,1892	0/0:28,0:28:75.07:0,75,1428	0/0:37,1:38:56.50:0,57,1824	0/0:19,0:19:42:0,42,788	0/0:26,1:27:63.09:0,63,1254	0/0:22,0:22:51.11:0,51,994	0/0:25,0:25:60.21:0,60,1176	0/0:27,0:27:59.83:0,60,1149	0/0:16,0:16:48.16:0,48,956	0/0:38,1:38:99:0,102,1994	0/0:38,0:37:90.26:0,90,1703	0/0:26,0:25:72.23:0,72,1362	0/0:15,0:15:36.12:0,36,708	0/0:75,0:75:99:0,108,2041	0/0:22,0:22:20.84:0,21,414	0/0:15,0:15:33.08:0,33,669	0/0:66,0:66:99:0,135,2702	0/0:17,0:17:48.04:0,48,973	0/0:32,0:32:84.26:0,84,1544	0/0:25,0:25:60.18:0,60,1134	0/0:17,0:17:45.15:0,45,892
chr10	45144912	.	ATGTGCGCGCGCGCGCGCGCGCGCGCGCGTGTGTGTGTG	A	8513.74	PASS	AB=1.000;AC=27;AF=0.540;AN=50;BaseQRankSum=5.075;DP=579;FS=2.960;HRun=0;HaplotypeScore=380.6887;InbreedingCoeff=0.7212;MQ=55.79;MQ0=6;MQRankSum=-4.746;QD=27.64;ReadPosRankSum=1.169;VQSLOD=2.4436;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:5,0:5:3.58:53,4,0	0/0:9,0:9:20.59:0,21,956	0/0:20,0:12:10.21:0,10,149	0/0:41,0:18:21.43:0,21,300	1/1:5,15:20:1.25:3,1,0	./.	./.	1/1:15,0:15:18.04:246,18,0	0/0:20,0:20:29.59:0,30,1295	1/1:23,0:23:36.10:2262,36,0	0/0:11,0:11:1.82:0,2,5	0/0:26,0:26:30.04:0,30,972	0/0:10,0:10:17.73:0,18,576	0/0:22,0:22:16.33:0,16,603	1/1:20,0:20:7.58:558,8,0	1/1:8,0:8:6.02:464,6,0	0/0:32,0:31:39.13:0,39,1338	1/1:20,0:18:12.04:843,12,0	1/1:4,12:16:32.31:735,32,0	1/1:3,15:18:9.46:562,9,0	1/1:20,52:69:0.51:66,1,0	0/1:31,0:31:8.48:8,0,11	0/0:16,0:15:9.70:0,10,531	0/0:57,0:57:38.88:0,39,1579	./.	1/1:10,18:28:35.92:1589,36,0	1/1:5,13:18:2.89:280,3,0	1/1:2,11:14:9.03:844,9,0
chr10	45144915	.	TGCGCGCGCGCGCGCGCGCGCGCGC	T	6147.78	PASS	AB=0.762;AC=28;AF=0.538;AN=52;BaseQRankSum=6.340;DP=556;FS=4.323;HRun=0;HaplotypeScore=277.0438;InbreedingCoeff=0.7046;MQ=54.90;MQ0=6;MQRankSum=-5.190;QD=20.29;ReadPosRankSum=1.839;VQSLOD=2.9549;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:5,0:5:0.22:1,0,0	0/0:7,0:9:17.23:0,17,989	0/0:16,0:11:10.27:0,10,174	0/0:37,0:16:17.35:0,17,313	1/1:20,0:20:0.89:2,1,0	./.	./.	1/1:13,0:13:16.67:243,17,0	0/0:19,0:19:29.23:0,29,1002	1/1:11,9:20:36.11:1904,36,0	0/0:6,5:11:1.46:0,1,5	0/0:26,0:27:30.52:0,31,896	0/0:10,0:10:14.92:0,15,519	0/0:22,0:23:15.99:0,16,558	1/1:8,11:19:7.58:337,8,0	1/1:5,2:7:6.02:356,6,0	0/0:29,0:29:39.13:0,39,1305	1/1:5,14:17:12.04:755,12,0	1/1:16,0:16:18.81:525,19,0	1/1:16,1:17:6.29:320,6,0	1/1:71,0:68:4.45:75,4,0	0/1:29,0:30:9.08:9,0,11	0/0:16,0:16:9.11:0,9,531	0/0:53,0:53:35.01:0,35,1569	0/1:1,4:5:0:0,0,0	1/1:28,0:28:21.47:930,21,0	1/1:18,0:18:2.77:169,3,0	1/1:15,0:14:9.03:520,9,0
chr10	45144931	.	CGCGCGCGCGT	C	2840.60	PASS	AB=0.982;AC=31;AF=0.646;AN=48;BaseQRankSum=4.966;DP=446;FS=1.089;HRun=0;HaplotypeScore=152.2399;InbreedingCoeff=0.3014;MQ=51.30;MQ0=20;MQRankSum=-6.185;QD=8.35;ReadPosRankSum=4.492;VQSLOD=2.4849;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:3,0:2:0:0,0,0	0/0:8,0:8:11.59:0,12,209	./.	0/0:14,0:6:7.96:0,8,42	1/1:16,0:15:0.89:2,1,0	./.	./.	./.	0/1:17,0:18:9.34:248,0,9	1/1:10,0:9:27.09:542,27,0	0/0:5,0:5:0.15:0,0,1	0/1:24,0:23:16.50:92,0,16	1/1:9,0:9:2.10:73,2,0	0/1:25,0:26:14.61:112,0,15	1/1:14,0:14:6.02:106,6,0	1/1:2,0:2:6.02:106,6,0	1/1:7,30:35:21.53:675,22,0	1/1:15,0:14:12.04:219,12,0	1/1:12,0:12:3.43:117,3,0	1/1:17,0:16:6.10:112,6,0	0/1:59,0:54:0.25:0,0,1	1/1:28,0:28:2.85:8,3,0	0/0:17,0:15:1.59:0,2,22	0/0:51,0:51:10.99:0,11,83	0/1:4,0:4:0:0,0,0	1/1:20,0:18:0.32:308,0,0	1/1:13,0:13:2.67:57,3,0	1/1:14,0:12:9.03:195,9,0
chr10	45144933	.	CGCGCGCGTGTGT	C	2796.13	PASS	AB=1.000;AC=35;AF=0.761;AN=46;BaseQRankSum=3.123;DP=447;FS=0.000;HRun=0;HaplotypeScore=155.4272;InbreedingCoeff=0.1997;MQ=51.41;MQ0=21;MQRankSum=-5.922;QD=7.94;ReadPosRankSum=4.129;VQSLOD=2.3482;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:2:0:0,0,0	0/1:8,0:8:10.16:10,0,323	./.	0/0:14,0:6:5.72:0,6,29	1/1:16,0:15:0.89:2,1,0	./.	./.	./.	1/1:2,14:17:11.31:387,11,0	1/1:10,0:9:27.09:527,27,0	0/0:5,0:5:0.36:0,0,1	1/1:6,16:22:4.51:167,5,0	1/1:1,9:11:2.28:93,2,0	1/1:4,21:26:5.24:183,5,0	1/1:14,0:14:3.90:81,4,0	1/1:2,0:2:6.02:104,6,0	1/1:37,0:34:20.89:273,21,0	1/1:15,0:14:12.02:191,12,0	0/1:12,0:12:86.62:99,0,87	1/1:17,0:16:5.87:136,6,0	0/0:60,0:54:1.59:0,2,35	1/1:5,23:28:4.73:11,5,0	1/1:4,2:14:1.55:4,2,0	1/1:13,37:52:0.86:3,1,0	./.	0/1:20,0:18:99:337,0,171	1/1:13,0:13:2.68:71,3,0	1/1:14,0:12:9.03:236,9,0
chr10	45144941	.	T	TA	1448.86	PASS	AB=0.987;AC=19;AF=0.352;AN=54;BaseQRankSum=1.040;DP=546;FS=13.523;HRun=0;HaplotypeScore=205.5895;InbreedingCoeff=0.1576;MQ=44.48;MQ0=24;MQRankSum=0.017;QD=6.97;ReadPosRankSum=-0.179;VQSLOD=2.5228;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:23:13.56:0,14,124	0/0:8,0:8:16.60:0,17,200	./.	0/0:5,0:3:0:0,0,0	1/1:19,0:18:2.99:24,3,0	0/0:5,0:5:12:0,12,139	0/0:13,0:8:5.70:0,6,120	0/1:12,0:11:15.62:142,0,16	0/0:17,0:17:9.94:0,10,59	0/1:18,2:19:33.54:526,0,34	1/1:8,0:8:2.71:21,3,0	0/0:24,0:22:5.83:0,6,44	0/0:12,0:11:2.24:0,2,8	0/0:24,0:24:5.88:0,6,47	1/1:19,2:21:11.67:179,12,0	0/1:9,0:9:12.65:42,0,13	0/0:40,0:37:19.57:0,20,89	0/1:25,0:23:22.47:245,0,22	0/1:18,0:18:25.77:63,0,26	1/1:17,0:16:5.02:89,5,0	0/0:69,0:64:5.92:0,6,22	0/0:28,0:27:0.12:0,0,1	0/0:17,0:15:0.47:0,0,1	0/0:47,0:47:0:0,0,1	1/1:10,0:10:3.79:48,4,0	0/1:21,0:19:24.11:132,0,24	1/1:13,0:13:2.77:45,3,0	0/1:15,0:12:6.65:39,0,7
chr10	45144943	.	T	TA	676.22	PASS	AB=0.955;AC=16;AF=0.296;AN=54;BaseQRankSum=1.754;DP=556;FS=13.057;HRun=0;HaplotypeScore=189.4328;InbreedingCoeff=0.0986;MQ=44.52;MQ0=24;MQRankSum=-1.101;QD=2.56;ReadPosRankSum=0.887;VQSLOD=2.4086;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:25:8.64:0,9,94	0/0:8,0:8:17.27:0,17,204	./.	0/0:7,0:3:0:0,0,0	0/1:17,1:18:0.25:1,0,0	0/0:5,0:5:2.58:0,3,41	0/0:14,0:9:9.88:0,10,89	0/1:13,0:12:65.91:128,0,66	0/0:17,0:17:10.10:0,10,59	0/1:20,0:19:99:164,0,124	0/0:8,0:8:1.82:0,2,6	0/0:24,0:22:5.83:0,6,48	0/0:12,0:11:2.24:0,2,8	0/0:25,0:25:5.91:0,6,47	1/1:21,1:22:10.65:70,11,0	0/1:9,1:10:19.75:20,0,35	0/0:40,0:37:27.41:0,27,198	0/1:23,2:23:55.32:184,0,55	0/1:17,1:18:63.16:78,0,63	1/1:17,0:16:3.75:15,4,0	1/1:68,3:65:3.79:67,4,0	0/0:28,0:27:0.12:0,0,1	0/0:17,0:15:0.47:0,0,1	0/0:47,0:47:0:0,0,1	0/0:11,0:11:1.74:0,2,15	0/1:20,1:19:55.30:72,0,55	1/1:13,0:13:1.58:5,2,0	0/1:15,0:12:6.74:7,0,7
chr10	45144967	.	TGTGTGTGTGTGTGA	T	1568.39	PASS	AB=0.962;AC=15;AF=0.268;AN=56;BaseQRankSum=5.969;DP=701;FS=1.238;HRun=0;HaplotypeScore=258.5110;InbreedingCoeff=-0.2347;MQ=45.44;MQ0=28;MQRankSum=-6.210;QD=5.48;ReadPosRankSum=-1.918;VQSLOD=2.3840;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:33:17.79:0,18,583	0/0:10,0:10:24.07:0,24,1133	0/0:19,0:10:23.19:0,23,460	0/0:20,0:10:23.15:0,23,340	0/0:26,0:24:18.98:0,19,401	0/0:10,0:10:21:0,21,688	0/0:24,0:19:36.82:0,37,900	0/0:34,0:32:93.15:0,93,2313	0/1:25,0:25:70.35:70,0,444	0/1:20,4:23:99:410,0,1122	0/1:8,1:9:36.93:37,0,245	0/0:26,0:23:3.33:0,3,331	0/1:14,0:13:36.33:36,0,201	0/1:32,0:32:23.83:24,0,381	0/1:18,2:19:99:163,0,170	0/1:14,1:15:99:143,0,271	0/0:40,0:38:49.77:0,50,951	0/1:26,1:25:99:169,0,959	0/1:18,0:17:21.79:22,0,1176	0/1:23,0:22:91.75:92,0,149	0/0:71,0:65:15.58:0,16,400	0/0:30,0:29:6.55:0,7,297	0/0:17,0:15:3.56:0,4,46	0/0:53,0:53:28.42:0,28,428	0/1:14,1:15:98.96:99,0,278	0/1:30,0:28:99:213,0,1334	0/1:20,0:20:38.69:39,0,267	1/1:14,0:12:9.03:210,9,0
chr10	45146340	.	GA	G	1547.40	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=1.728;DP=529;FS=21.173;HRun=1;HaplotypeScore=71.0486;InbreedingCoeff=0.9750;MQ=65.92;MQ0=24;MQRankSum=-1.246;QD=25.37;ReadPosRankSum=-0.177;VQSLOD=2.2111;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,23:24:50.94:687,51,0	0/0:9,0:9:14.37:0,14,234	0/0:44,0:17:45.14:0,45,669	0/0:70,0:28:67.06:0,67,997	0/0:17,0:16:36.07:0,36,504	1/1:1,9:7:15.01:188,15,0	1/1:3,21:22:58.76:813,59,0	0/0:19,0:19:51.62:0,52,755	0/0:21,0:21:46.33:0,46,723	0/0:14,0:14:42.05:0,42,594	0/0:8,0:7:15.05:0,15,236	0/0:11,0:11:26.91:0,27,379	0/0:14,0:14:42.11:0,42,605	0/0:19,0:19:50.11:0,50,748	0/0:16,0:16:38.11:0,38,578	0/0:13,0:13:35.48:0,35,507	0/0:18,0:18:51.17:0,51,799	0/0:9,0:8:24.08:0,24,383	0/0:13,0:12:32.29:0,32,439	0/0:15,0:15:36.09:0,36,528	0/0:22,0:22:57.19:0,57,896	0/0:17,0:16:38.67:0,39,562	0/0:17,0:17:42.54:0,43,617	0/0:24,0:23:50.11:0,50,701	0/0:14,0:13:36.12:0,36,558	0/0:20,0:20:60.08:0,60,850	0/0:17,0:17:45.11:0,45,629	0/0:7,0:6:14.94:0,15,181
chr10	45147106	.	T	TGCCACCATAA	5935.18	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-0.034;DP=710;FS=13.271;HRun=0;HaplotypeScore=212.3825;InbreedingCoeff=0.9945;MQ=86.13;MQ0=0;MQRankSum=-11.285;QD=69.83;ReadPosRankSum=-4.133;VQSLOD=2.7960;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:22,10:36:63.09:2512,63,0	0/0:18,0:18:48.16:0,48,1417	0/0:20,0:20:40.02:0,40,1113	0/0:31,0:31:66.21:0,66,1659	0/0:25,0:25:66.23:0,66,1897	1/1:10,7:19:21.07:1066,21,0	1/1:17,10:30:60.12:2358,60,0	0/0:26,0:26:57.18:0,57,1628	0/0:24,0:24:63.22:0,63,1862	0/0:21,0:21:48.16:0,48,1319	0/0:13,0:13:27.09:0,27,844	0/0:29,0:29:72.23:0,72,2154	0/0:27,0:27:63.20:0,63,1889	0/0:45,0:45:99:0,126,3728	0/0:26,0:26:60.21:0,60,1821	0/0:28,0:28:78.27:0,78,2386	0/0:34,0:34:96.31:0,96,2796	0/0:28,0:28:69.24:0,69,2081	0/0:11,0:11:21.07:0,21,623	0/0:19,0:19:48.15:0,48,1379	0/0:56,0:56:99:0,129,3654	0/0:14,0:14:27.09:0,27,805	0/0:19,0:19:51.16:0,51,1488	0/0:39,0:39:99:0,102,3176	0/0:14,0:14:27.07:0,27,704	0/0:19,0:19:39.13:0,39,1139	0/0:31,0:31:84.29:0,84,2523	0/0:8,0:8:21.07:0,21,643
chr10	45147440	.	C	CA	5471.80	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=-5.363;DP=620;FS=2.416;HRun=10;HaplotypeScore=75.3262;InbreedingCoeff=0.9385;MQ=65.27;MQ0=3;MQRankSum=0.192;QD=15.86;ReadPosRankSum=-2.179;VQSLOD=4.7841;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:0,0:39:69.26:0,69,200	0/0:8,0:8:23.97:0,24,197	0/0:14,0:8:14.82:0,15,105	0/1:11,0:9:5.97:6,0,19	1/1:4,20:25:59.89:589,60,0	0/0:2,0:14:22.41:0,22,65	0/0:2,0:26:42.78:0,43,123	1/1:7,25:32:28.88:680,29,0	0/0:18,0:18:47.94:0,48,394	1/1:12,0:31:57.39:312,57,0	1/1:3,0:21:31.45:176,31,0	0/0:24,0:24:53.92:0,54,443	0/0:19,0:19:41.93:0,42,345	0/0:19,0:20:49.97:0,50,397	1/1:1,0:22:42.68:214,43,0	1/1:5,1:32:16.50:250,17,0	0/0:26,0:26:62.90:0,63,517	1/1:3,3:16:34.59:213,35,0	1/1:12,16:28:48.09:496,48,0	1/1:2,18:20:48.12:512,48,0	1/1:2,11:13:26.90:288,27,0	0/0:23,0:23:56.89:0,57,464	0/0:21,0:21:26.21:0,26,348	0/0:23,0:23:65.92:0,66,542	1/1:2,0:23:45.36:225,45,0	1/1:9,16:25:45.40:472,45,0	1/1:6,21:29:65.70:651,66,0	1/1:3,11:15:38.90:387,39,0
chr10	45149347	.	A	ATGTGTGTGTG	17035.15	PASS	AB=0.586;AC=46;AF=0.821;AN=56;BaseQRankSum=3.588;DP=780;FS=3.400;HRun=0;HaplotypeScore=264.9056;InbreedingCoeff=0.4574;MQ=56.06;MQ0=2;MQRankSum=-6.840;QD=24.72;ReadPosRankSum=0.142;VQSLOD=4.0214;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:14,0:44:7.13:139,0,7	0/1:2,0:12:17.13:17,0,43	0/0:25,0:22:30.03:0,30,509	0/0:34,0:26:28.92:0,29,706	1/1:12,0:27:3.01:131,3,0	0/1:9,0:28:90.57:91,0,137	0/1:13,0:37:99:115,0,110	1/1:37,0:33:54.17:1066,54,0	1/1:16,14:32:33.11:1459,33,0	1/1:28,0:28:66.22:1465,66,0	1/1:18,0:21:20.99:474,21,0	1/1:13,18:31:15.94:739,16,0	1/1:12,20:36:24.08:1060,24,0	1/1:8,4:16:6.02:241,6,0	1/1:30,0:35:42.14:1275,42,0	1/1:12,0:27:15.05:654,15,0	0/0:30,0:31:63.09:0,63,1756	1/1:17,0:20:21.30:803,21,0	1/1:28,0:27:48.16:958,48,0	1/1:14,0:27:15.01:473,15,0	1/1:24,0:24:15.05:363,15,0	1/1:12,10:26:15.05:598,15,0	1/1:15,13:28:17.55:758,18,0	1/1:17,8:29:24.08:1070,24,0	1/1:25,0:29:42.07:1209,42,0	1/1:29,0:26:54.17:1123,54,0	1/1:13,0:30:12.04:520,12,0	1/1:6,0:5:9.03:237,9,0
chr10	45151027	.	A	AC	16009.62	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=0.294;DP=616;FS=6.985;HRun=3;HaplotypeScore=79.8325;InbreedingCoeff=0.9995;MQ=64.48;MQ0=0;MQRankSum=-2.888;QD=35.26;ReadPosRankSum=3.024;VQSLOD=5.4617;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,105,1244	0/0:11,0:11:30.09:0,30,360	0/0:27,0:25:69.19:0,69,810	0/0:19,0:19:54.15:0,54,630	1/1:1,13:14:36.12:503,36,0	0/0:21,0:21:57.17:0,57,682	0/0:29,0:29:81.25:0,81,972	1/1:6,26:32:75.23:1031,75,0	1/1:2,29:31:81.27:1134,81,0	1/1:0,26:26:72.24:1008,72,0	1/1:3,12:15:27.09:377,27,0	1/1:2,32:34:78.01:1087,78,0	1/1:4,16:21:48.10:653,48,0	1/1:1,17:18:48.16:672,48,0	1/1:1,17:18:45.15:630,45,0	1/1:0,25:25:69.23:966,69,0	0/0:17,0:17:48.15:0,48,576	1/1:1,17:18:45.15:629,45,0	1/1:2,17:19:54.18:756,54,0	1/1:2,17:19:48.12:644,48,0	1/1:2,30:32:78.26:1092,78,0	1/1:3,11:14:30.10:419,30,0	1/1:0,11:11:33.11:462,33,0	1/1:0,21:21:63.21:882,63,0	1/1:3,22:25:57.17:798,57,0	1/1:2,23:25:66.22:923,66,0	1/1:1,17:18:48.16:671,48,0	1/1:0,18:18:48.16:672,48,0
chr10	45152143	.	CT	C	986.34	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=7.920;DP=538;FS=0.724;HRun=2;HaplotypeScore=59.2489;InbreedingCoeff=0.9900;MQ=87.51;MQ0=0;MQRankSum=-3.488;QD=28.18;ReadPosRankSum=-0.224;VQSLOD=3.0950;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,13:13:33.11:428,33,0	0/0:9,0:9:27.09:0,27,405	0/0:15,0:15:38.94:0,39,517	0/0:27,0:27:74.86:0,75,1011	0/0:15,0:15:42.10:0,42,604	1/1:1,10:11:24.08:311,24,0	1/1:0,11:11:30.10:389,30,0	0/0:25,0:25:66.21:0,66,970	0/0:32,0:32:96.33:0,96,1439	0/0:17,0:17:48.13:0,48,684	0/0:19,0:19:51.16:0,51,742	0/0:25,0:25:75.25:0,75,1123	0/0:24,0:24:72.23:0,72,1059	0/0:25,0:25:72.20:0,72,1018	0/0:23,0:23:66.20:0,66,944	0/0:22,0:22:66.18:0,66,954	0/0:24,0:24:69.19:0,69,990	0/0:22,0:22:66.22:0,66,985	0/0:25,0:25:72.22:0,72,1039	0/0:26,0:26:78.13:0,78,1033	0/0:26,0:26:72.14:0,72,1049	0/0:12,0:12:36.12:0,36,538	0/0:13,0:13:36.12:0,36,539	0/0:22,0:22:66.22:0,66,988	0/0:6,0:6:15.05:0,15,224	0/0:17,0:17:48.13:0,48,679	0/0:26,0:25:72.24:0,72,1075	0/0:6,0:6:18.06:0,18,270
chr10	45152360	.	G	GCCTGTGCAAGCTGCACTT	25754.56	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-5.263;DP=688;FS=8.196;HRun=0;HaplotypeScore=317.2886;InbreedingCoeff=0.9889;MQ=70.59;MQ0=0;MQRankSum=-10.536;QD=76.20;ReadPosRankSum=-8.447;VQSLOD=2.1511;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:92.31:0,92,3712	0/0:8,0:8:18.06:0,18,852	0/0:17,0:17:21.07:0,21,575	0/0:15,0:15:11.93:0,12,231	1/1:14,1:15:17.96:459,18,0	0/0:27,0:27:51.18:0,51,1998	0/0:28,0:28:57.18:0,57,2033	1/1:35,0:35:30.07:1266,30,0	0/0:27,0:27:45.14:0,45,2013	1/1:26,7:33:54.12:3033,54,0	1/1:17,0:17:21.02:1002,21,0	0/0:16,0:16:36.11:0,36,1357	0/0:32,0:32:57.18:0,57,2452	0/0:27,0:27:51.16:0,51,2331	1/1:28,3:31:42.12:2761,42,0	1/1:19,9:29:48.16:3380,48,0	0/0:44,0:44:99:0,111,4601	1/1:19,1:20:30.06:1277,30,0	1/1:25,0:25:23.88:534,24,0	1/1:21,2:23:38.93:2093,39,0	1/1:31,1:32:36.12:1712,36,0	0/0:9,0:9:21.04:0,21,748	0/0:12,0:12:27.08:0,27,1028	0/0:40,0:40:93.28:0,93,3518	1/1:11,4:15:27.08:1708,27,0	1/1:21,1:22:42.12:2353,42,0	1/1:30,4:35:57.15:2907,57,0	1/1:0,5:6:15.05:1269,15,0
chr10	45152453	.	TGTTTG	T	16061.47	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=11.440;DP=613;FS=43.742;HRun=0;HaplotypeScore=137.4648;InbreedingCoeff=0.9988;MQ=66.28;MQ0=1;MQRankSum=-9.000;QD=54.26;ReadPosRankSum=1.653;VQSLOD=3.3530;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,120,3248	0/0:12,0:12:36.12:0,36,1056	0/0:33,0:30:85.79:0,86,1934	0/0:21,0:22:57.15:0,57,1433	1/1:8,17:25:66.18:1286,66,0	0/0:24,0:24:63.22:0,63,1705	0/0:22,0:22:63.22:0,63,1807	1/1:3,17:20:45.12:812,45,0	0/0:13,0:13:33.11:0,33,870	1/1:6,20:25:72.24:1473,72,0	1/1:5,18:23:66.23:1368,66,0	0/0:15,0:15:42.14:0,42,1177	0/0:19,0:19:57.19:0,57,1542	0/0:12,0:12:36.08:0,36,1021	1/1:3,17:21:63.22:1280,63,0	1/1:4,19:23:63.22:1304,63,0	0/0:31,0:31:87.27:0,87,2407	1/1:10,15:26:63.21:1221,63,0	1/1:9,10:19:51.17:946,51,0	1/1:6,15:21:63.20:1260,63,0	1/1:5,11:16:36.12:735,36,0	0/0:16,0:16:45.14:0,45,1275	0/0:19,0:19:51.17:0,51,1481	0/0:33,0:33:75.26:0,75,2137	1/1:5,13:18:54.18:1081,54,0	1/1:7,13:20:54.18:1105,54,0	1/1:4,26:30:90.29:1814,90,0	1/1:3,5:8:18.06:376,18,0
chr10	45152454	.	GT	G	3868.09	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=17.490;DP=618;FS=40.832;HRun=6;HaplotypeScore=134.5986;InbreedingCoeff=0.9982;MQ=66.07;MQ0=1;MQRankSum=-8.284;QD=12.85;ReadPosRankSum=2.243;VQSLOD=0.5327;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,120,1619	0/0:12,0:12:36.12:0,36,517	0/0:35,0:31:88.98:0,89,1141	0/0:23,0:23:60.13:0,60,800	1/1:25,2:27:39.79:280,40,0	0/0:25,0:25:66.20:0,66,928	0/0:23,0:23:66.20:0,66,930	1/1:20,0:20:35.49:259,35,0	0/0:12,0:12:33.11:0,33,472	1/1:24,3:27:69.15:388,69,0	1/1:19,4:23:61.73:350,62,0	0/0:15,0:15:42.14:0,42,603	0/0:19,0:19:57.18:0,57,800	0/0:12,0:12:36.08:0,36,495	1/1:20,1:21:53.34:242,53,0	1/1:24,0:24:32.44:199,32,0	0/0:29,0:29:87.26:0,87,1214	1/1:22,3:26:34.79:314,35,0	1/1:12,6:18:44.77:333,45,0	1/1:19,3:22:56.77:319,57,0	1/1:13,3:16:33.23:164,33,0	0/0:15,0:15:45.14:0,45,628	0/0:19,0:19:51.17:0,51,719	0/0:33,0:32:75.25:0,75,1077	1/1:14,4:18:49.53:292,50,0	1/1:17,4:21:26.94:271,27,0	1/1:29,1:30:78.44:363,78,0	1/1:7,1:8:16.73:95,17,0
chr10	45152524	.	T	TC	19738.44	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-2.771;DP=579;FS=4.066;HRun=1;HaplotypeScore=86.3233;InbreedingCoeff=0.9913;MQ=65.47;MQ0=0;MQRankSum=-4.517;QD=39.88;ReadPosRankSum=3.182;VQSLOD=5.4780;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,41:45:99:1791,120,0	0/0:9,0:9:27.09:0,27,350	0/0:26,0:24:51.49:0,51,793	0/0:14,0:14:42.14:0,42,545	1/1:3,25:28:69.17:1002,69,0	1/1:1,29:30:81.27:1213,81,0	1/1:0,28:28:81.27:1214,81,0	1/1:0,24:24:72.23:1053,72,0	1/1:0,7:7:21.07:314,21,0	1/1:2,24:26:75.25:1121,75,0	1/1:2,16:18:42.14:629,42,0	1/1:2,10:12:30.20:412,30,0	1/1:0,9:9:27.02:377,27,0	1/1:0,5:5:14.98:197,15,0	1/1:3,21:24:66.14:938,66,0	1/1:0,24:24:69.19:1007,69,0	0/0:35,0:35:99:0,102,1275	1/1:0,21:21:57.19:853,57,0	1/1:1,23:24:63.68:927,64,0	1/1:2,17:19:51.17:763,51,0	1/1:1,25:26:66.22:989,66,0	1/1:0,8:8:24.08:359,24,0	1/1:1,10:11:30.01:403,30,0	1/1:0,10:9:21.07:315,21,0	1/1:2,15:17:42.14:629,42,0	1/1:3,23:26:75.25:1117,75,0	1/1:4,40:44:99:1806,123,0	1/1:1,8:9:23.97:307,24,0
chr10	45152841	.	C	CGT	121.28	PASS	AB=0.838;AC=9;AF=0.346;AN=26;BaseQRankSum=-1.480;DP=459;FS=0.000;HRun=0;HaplotypeScore=116.7020;InbreedingCoeff=0.2881;MQ=71.31;MQ0=8;MQRankSum=0.916;QD=1.38;ReadPosRankSum=0.282;VQSLOD=1.8228;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:4.12:0,4,23	./.	./.	./.	./.	./.	0/0:23,0:24:5.42:0,5,28	./.	./.	0/0:19,0:21:5.35:0,5,28	./.	1/1:14,0:13:2.24:41,2,0	1/1:11,0:11:8.97:73,9,0	0/0:15,0:15:2.90:0,3,31	0/0:15,0:15:2.84:0,3,14	./.	0/0:18,0:17:2.66:0,3,8	1/1:23,0:22:0.47:1,0,0	./.	./.	./.	1/1:9,0:9:3:25,3,0	./.	0/1:25,6:31:22.53:78,0,23	./.	./.	0/0:14,0:15:2.84:0,3,14	0/0:12,0:14:7.72:0,8,34
chr10	45152895	.	T	TCC	5238.87	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=3.343;DP=390;FS=2.616;HRun=2;HaplotypeScore=84.2265;InbreedingCoeff=0.9226;MQ=59.64;MQ0=15;MQRankSum=0.427;QD=28.63;ReadPosRankSum=-1.346;VQSLOD=3.9374;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:39.13:0,39,550	0/0:7,0:7:21.07:0,21,298	0/0:23,0:12:36.10:0,36,489	0/0:31,0:21:63.21:0,63,899	1/1:0,7:7:12.04:158,12,0	0/0:20,0:20:45.09:0,45,601	0/0:17,0:17:36.09:0,36,464	1/1:1,11:13:32.99:419,33,0	0/0:8,0:7:12.04:0,12,163	1/1:15,0:14:42.11:652,42,0	1/1:0,12:12:3.01:38,3,0	0/0:7,0:7:13.47:0,13,168	0/0:13,0:13:35.97:0,36,448	0/0:8,0:8:15.05:0,15,216	1/1:15,0:14:33.05:519,33,0	1/1:6,0:6:17.78:228,18,0	0/0:18,0:17:36.12:0,36,490	1/1:0,21:23:6.02:88,6,0	1/1:11,0:9:24.07:311,24,0	1/1:0,11:11:18.02:224,18,0	1/1:27,0:26:60.20:995,60,0	0/0:7,0:7:9.01:0,9,110	0/0:3,0:3:9.03:0,9,125	0/0:25,0:23:38.80:0,39,511	1/1:5,0:5:15.05:259,15,0	1/1:4,10:14:33.06:500,33,0	1/1:19,0:19:48.10:686,48,0	1/1:5,0:5:12.03:160,12,0
chr10	45152896	.	C	CCC	5239.05	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=3.343;DP=388;FS=2.616;HRun=1;HaplotypeScore=84.8645;InbreedingCoeff=0.9229;MQ=60.00;MQ0=14;MQRankSum=0.125;QD=28.79;ReadPosRankSum=-1.290;VQSLOD=3.9632;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:39.13:0,39,550	0/0:7,0:7:21.07:0,21,298	0/0:23,0:12:36.10:0,36,489	0/0:32,0:22:63.21:0,63,899	1/1:7,0:7:12.04:158,12,0	0/0:19,0:19:45.09:0,45,601	0/0:17,0:17:36.09:0,36,464	1/1:12,0:12:32.99:419,33,0	0/0:7,0:6:12.04:0,12,163	1/1:15,0:14:42.11:652,42,0	1/1:14,0:14:3.01:38,3,0	0/0:7,0:7:13.84:0,14,169	0/0:13,0:13:35.97:0,36,448	0/0:8,0:8:15.05:0,15,216	1/1:14,0:14:33.05:520,33,0	1/1:6,0:6:17.78:228,18,0	0/0:18,0:17:36.12:0,36,490	1/1:23,0:23:6.02:88,6,0	1/1:5,5:9:24.07:311,24,0	1/1:11,0:11:18.02:224,18,0	1/1:27,0:26:60.20:995,60,0	0/0:8,0:8:9.01:0,9,110	0/0:3,0:3:9.03:0,9,125	0/0:26,0:24:38.80:0,39,511	1/1:5,0:5:15.05:259,15,0	1/1:14,0:14:33.06:500,33,0	1/1:19,0:19:48.10:686,48,0	1/1:4,0:4:12.03:160,12,0
chr10	45153815	.	CT	C	6514.08	PASS	AB=0.875;AC=39;AF=0.696;AN=56;BaseQRankSum=-8.002;DP=538;FS=4.235;HRun=11;HaplotypeScore=73.1661;InbreedingCoeff=0.8806;MQ=70.62;MQ0=1;MQRankSum=-1.371;QD=16.08;ReadPosRankSum=2.065;VQSLOD=5.8775;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,0:27:15.41:83,15,0	1/1:0,10:10:29.97:246,30,0	0/1:12,2:13:52.85:53,0,62	0/0:12,1:10:15.85:0,16,132	1/1:5,26:31:39.87:534,40,0	1/1:6,0:18:20.83:61,21,0	1/1:1,0:16:24.44:72,24,0	1/1:5,16:21:47.93:394,48,0	0/0:0,0:13:31.32:0,31,157	1/1:2,19:21:53.93:443,54,0	1/1:4,17:22:52.97:425,53,0	0/0:5,0:15:31.48:0,31,175	0/0:5,0:18:51.97:0,52,313	0/0:3,0:17:32.43:0,32,158	1/1:3,21:24:27.95:436,28,0	1/1:2,13:16:6.01:245,6,0	1/1:4,27:32:79.94:646,80,0	1/1:4,28:33:64.44:649,64,0	1/1:8,15:23:10.25:288,10,0	1/1:1,18:19:50.92:418,51,0	1/1:1,4:5:11.98:99,12,0	0/0:5,0:23:57.57:0,58,337	0/0:2,0:19:45.65:0,46,246	0/0:3,0:15:28.78:0,29,178	1/1:3,7:11:28.96:221,29,0	1/1:4,20:25:61.93:493,62,0	1/1:6,17:23:18.93:362,19,0	1/1:0,14:14:41.95:345,42,0
chr10	45157520	.	ACAAT	A	2579.90	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=7.651;DP=638;FS=5.351;HRun=0;HaplotypeScore=128.9668;InbreedingCoeff=0.9969;MQ=69.03;MQ0=1;MQRankSum=-2.393;QD=41.61;ReadPosRankSum=2.307;VQSLOD=4.1468;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,25:26:60.21:1133,60,0	0/0:12,0:12:36.12:0,36,942	0/0:24,0:23:56.64:0,57,1112	0/0:16,0:15:39.87:0,40,842	0/0:21,0:21:60.21:0,60,1542	1/1:1,17:18:45.15:854,45,0	1/1:0,18:18:39.13:736,39,0	0/0:34,0:34:93.32:0,93,2424	0/0:26,0:26:78.24:0,78,1996	0/0:34,0:34:99:0,99,2562	0/0:24,0:24:66.21:0,66,1660	0/0:26,0:26:69.24:0,69,1845	0/0:25,0:25:75.26:0,75,1949	0/0:23,0:23:66.23:0,66,1773	0/0:26,0:26:63.21:0,63,1563	0/0:16,0:16:45.15:0,45,1210	0/0:19,0:19:51.17:0,51,1195	0/0:14,0:14:39.12:0,39,992	0/0:18,0:18:51.17:0,51,1353	0/0:35,0:35:99:0,105,2583	0/0:7,0:7:18.06:0,18,419	0/0:34,0:34:99:0,99,2613	0/0:18,0:18:54.17:0,54,1393	0/0:16,0:16:48.16:0,48,1274	0/0:31,0:31:81.28:0,81,2143	0/0:35,0:35:99:0,99,2564	0/0:30,0:30:81.26:0,81,2021	0/0:11,0:11:33.11:0,33,803
chr10	45157577	.	C	CATAGTTTCGGGTT	61948.56	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=-3.485;DP=694;FS=4.843;HRun=0;HaplotypeScore=220.8252;InbreedingCoeff=0.9992;MQ=70.98;MQ0=0;MQRankSum=-17.884;QD=146.11;ReadPosRankSum=-2.005;VQSLOD=4.5813;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:81.28:0,81,3071	1/1:4,6:11:33.11:1728,33,0	0/0:27,0:27:67.10:0,67,2144	0/0:10,0:10:27.02:0,27,787	1/1:19,15:37:90.19:4450,90,0	0/0:19,0:19:54.14:0,54,1761	0/0:21,0:21:54.17:0,54,2056	1/1:30,4:39:99:4834,108,0	0/0:24,0:24:69.21:0,69,2515	1/1:11,11:26:78.19:4102,78,0	1/1:10,14:29:75.17:4111,75,0	0/0:18,0:18:51.18:0,51,1970	0/0:28,0:28:78.27:0,78,3052	0/0:23,0:23:60.19:0,60,2217	1/1:15,15:34:87.30:4994,87,0	1/1:15,14:31:87.30:5161,87,0	1/1:8,9:17:45.15:2832,45,0	1/1:7,5:13:36.12:2180,36,0	1/1:11,10:23:69.23:3535,69,0	1/1:14,20:35:99:5584,102,0	1/1:9,2:13:21.03:878,21,0	0/0:25,0:25:75.25:0,75,2790	0/0:30,0:30:90.31:0,90,3278	0/0:13,0:13:39.11:0,39,1412	1/1:17,12:34:87.26:4868,87,0	1/1:14,14:33:99:5131,99,0	1/1:19,14:38:99:5418,99,0	1/1:3,8:11:33.11:2143,33,0
chr10	45158263	.	CA	C	6260.34	PASS	AB=0.885;AC=17;AF=0.304;AN=56;BaseQRankSum=16.745;DP=680;FS=3.645;HRun=3;HaplotypeScore=91.5420;InbreedingCoeff=0.9147;MQ=86.19;MQ0=0;MQRankSum=-2.619;QD=28.46;ReadPosRankSum=3.674;VQSLOD=4.2606;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:75.25:0,75,1077	1/1:0,9:9:27.08:315,27,0	0/0:23,0:23:66.20:0,66,893	0/0:22,0:22:50.57:0,51,713	0/0:28,0:28:81.26:0,81,1134	0/0:29,0:29:84.27:0,84,1190	0/0:21,0:21:63.21:0,63,906	0/0:36,0:36:99:0,102,1425	0/0:20,0:20:57.19:0,57,821	1/1:2,30:32:90.26:1039,90,0	1/1:1,26:27:72.21:840,72,0	0/0:19,0:19:57.10:0,57,725	0/0:34,0:34:99:0,102,1451	0/0:30,0:30:84.28:0,84,1202	1/1:2,25:27:69.20:806,69,0	1/1:0,31:31:93.28:1085,93,0	1/1:0,19:19:54.16:630,54,0	1/1:1,25:26:63.18:736,63,0	0/0:24,0:24:72.23:0,72,1004	0/0:21,0:21:63.19:0,63,886	0/0:21,0:21:60.20:0,60,864	0/0:25,0:25:72.24:0,72,1037	0/0:27,0:27:81.27:0,81,1165	0/0:13,0:13:39.13:0,39,560	1/1:2,24:26:66.20:771,66,0	0/1:20,3:23:38.74:39,0,738	0/0:35,0:35:99:0,105,1507	0/0:7,0:7:21.07:0,21,302
chr10	45158510	.	TA	T	13156.14	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=18.504;DP=607;FS=2.161;HRun=2;HaplotypeScore=121.4630;InbreedingCoeff=0.9977;MQ=80.38;MQ0=0;MQRankSum=-4.047;QD=35.56;ReadPosRankSum=2.711;VQSLOD=4.5652;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:72.22:0,72,1056	1/1:2,7:9:15.05:195,15,0	0/0:18,0:18:53.83:0,54,705	0/0:21,0:20:54.11:0,54,729	1/1:0,19:19:54.18:701,54,0	0/0:25,0:25:75.23:0,75,1084	0/0:20,0:20:60.18:0,60,860	1/1:2,34:36:99:1282,102,0	0/0:18,0:18:54.18:0,54,804	1/1:0,22:22:66.21:857,66,0	1/1:1,25:26:68.74:870,69,0	0/0:26,0:26:72.24:0,72,1060	0/0:13,0:13:36.11:0,36,516	0/0:15,0:15:45.15:0,45,668	1/1:0,27:27:75.24:974,75,0	1/1:2,14:16:36.12:467,36,0	1/1:0,25:25:69.22:896,69,0	1/1:1,19:20:54.18:701,54,0	1/1:1,21:22:63.19:801,63,0	1/1:0,15:15:42.14:545,42,0	1/1:0,22:22:63.20:818,63,0	0/0:25,0:25:75.25:0,75,1109	0/0:19,0:19:54.15:0,54,747	0/0:12,0:12:36.12:0,36,540	1/1:0,36:36:99:1286,99,0	1/1:1,19:20:57.19:740,57,0	1/1:0,37:37:99:1323,102,0	1/1:0,18:18:54.18:701,54,0
chr10	45159701	.	AGTGTGTGTGTGTGTGTGT	A	611.76	PASS	AC=10;AF=0.208;AN=48;BaseQRankSum=4.303;DP=591;FS=1.710;HRun=0;HaplotypeScore=292.2484;InbreedingCoeff=0.6987;MQ=62.49;MQ0=23;MQRankSum=-4.309;QD=7.11;ReadPosRankSum=-1.532;VQSLOD=2.1356;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:23:20.77:0,21,1058	0/0:4,0:6:6:0,6,80	0/0:37,0:18:6.02:0,6,112	0/0:36,0:21:6:0,6,90	0/0:21,0:21:11.08:0,11,533	./.	./.	0/0:23,0:23:34.65:0,35,1224	1/1:10,8:20:6.02:257,6,0	0/0:23,0:21:45.14:0,45,2357	0/0:18,0:18:18.22:0,18,1234	1/1:6,7:12:5.45:260,5,0	1/1:9,5:14:6.02:182,6,0	1/1:12,10:23:1.38:34,1,0	0/0:32,0:32:46.40:0,46,2627	0/0:18,0:18:23.88:0,24,1387	0/0:35,0:34:60.20:0,60,2367	0/0:12,0:12:15.05:0,15,626	0/0:18,0:18:15.05:0,15,675	0/0:22,0:21:30.10:0,30,1410	0/0:23,0:23:18.06:0,18,585	./.	1/1:12,0:15:0.88:2,1,0	./.	0/0:21,0:21:17.39:0,17,1131	0/0:22,0:22:39.13:0,39,1718	0/0:30,0:30:47.88:0,48,1944	0/0:18,0:15:17.98:0,18,495
chr10	45159747	.	TGTGAGA	T	2673.37	PASS	AB=1.000;AC=21;AF=0.404;AN=52;BaseQRankSum=0.140;DP=475;FS=22.189;HRun=0;HaplotypeScore=174.6278;InbreedingCoeff=0.4558;MQ=36.96;MQ0=21;MQRankSum=-3.877;QD=10.61;ReadPosRankSum=1.092;VQSLOD=1.3401;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:16:3.11:3,0,66	0/0:4,0:4:0.47:0,0,3	./.	0/0:11,0:4:11.95:0,12,129	1/1:12,8:20:0.22:1,0,0	./.	0/0:14,0:11:0.47:0,0,2	0/1:15,0:14:25.88:285,0,26	1/1:25,0:25:13.47:98,13,0	0/0:18,0:18:33.04:0,33,330	0/0:17,0:16:12.94:0,13,108	0/1:21,0:19:19.36:19,0,149	1/1:12,0:12:5.56:52,6,0	0/0:15,0:15:5.95:0,6,69	0/0:27,0:26:31.84:0,32,261	0/0:11,0:11:17.12:0,17,161	0/1:33,0:32:32.54:33,0,359	0/1:6,0:5:0.25:0,0,15	1/1:14,0:14:19.06:401,19,0	1/1:20,0:17:20.81:252,21,0	0/0:18,1:17:1.17:0,1,4	0/0:18,0:17:6.02:0,6,91	0/0:13,0:11:5.60:0,6,44	0/0:22,0:20:5.87:0,6,99	0/0:15,0:15:8.87:0,9,113	1/1:20,3:22:63.14:846,63,0	1/1:20,6:27:38.21:550,38,0	1/1:13,1:13:22.31:302,22,0
chr10	45159759	.	AGAGG	A	2757.92	PASS	AB=0.988;AC=34;AF=0.654;AN=52;BaseQRankSum=0.718;DP=478;FS=1.464;HRun=0;HaplotypeScore=172.8621;InbreedingCoeff=0.1095;MQ=35.13;MQ0=23;MQRankSum=-2.446;QD=7.41;ReadPosRankSum=1.137;VQSLOD=3.0550;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:18:31.84:51,0,32	0/1:4,0:4:0.24:0,0,2	./.	0/0:13,0:4:8.72:0,9,65	1/1:20,0:20:0.23:1,0,0	./.	0/1:20,0:17:32.85:37,0,33	1/1:17,1:16:33.37:336,33,0	1/1:25,0:25:26.26:301,26,0	0/1:13,0:13:35.04:35,0,247	1/1:12,2:13:7.98:67,8,0	0/1:19,0:17:52.71:54,0,53	1/1:16,0:16:27.93:256,28,0	0/1:17,0:17:17.68:24,0,18	0/1:24,4:27:3.33:86,0,3	1/1:10,0:10:11.74:80,12,0	0/0:32,0:31:5.62:0,6,371	0/1:8,0:7:12.25:12,0,22	1/1:15,0:14:38.31:329,38,0	1/1:16,0:13:3.75:21,4,0	0/0:18,0:17:0.14:0,0,1	0/0:18,0:17:5.90:0,6,41	0/1:11,0:11:1.03:32,0,1	0/1:20,0:19:9.49:9,0,39	1/1:13,1:14:5.73:48,6,0	1/1:21,0:19:43.44:498,43,0	1/1:26,0:25:44.44:448,44,0	1/1:13,0:13:15.82:185,16,0
chr10	45159761	.	AGG	A	2192.69	PASS	AB=1.000;AC=44;AF=0.846;AN=52;BaseQRankSum=1.737;DP=476;FS=2.940;HRun=3;HaplotypeScore=164.1607;InbreedingCoeff=0.3367;MQ=34.86;MQ0=24;MQRankSum=0.175;QD=5.64;ReadPosRankSum=2.920;VQSLOD=0.4051;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:18:31.69:42,0,32	1/1:4,0:4:1.45:4,1,0	./.	0/0:13,0:4:8.67:0,9,47	1/1:20,0:20:0.47:1,0,0	./.	1/1:20,0:17:7.78:73,8,0	1/1:19,0:17:32.89:208,33,0	1/1:23,2:25:26.63:242,27,0	0/1:13,0:13:44.63:45,0,104	1/1:15,0:13:8.31:68,8,0	1/1:18,0:16:12.47:85,12,0	1/1:15,2:17:32.11:268,32,0	1/1:16,0:16:8.87:65,9,0	1/1:26,2:27:2.60:66,3,0	1/1:9,1:10:4.77:69,5,0	0/0:31,0:30:11.46:0,11,376	1/1:8,0:7:0.23:32,0,0	1/1:14,0:13:37.74:216,38,0	1/1:14,0:11:3.44:21,3,0	0/0:18,0:17:0.14:0,0,1	1/1:19,0:18:1.82:5,2,0	1/1:11,0:11:8.88:82,9,0	1/1:21,0:20:3.78:20,4,0	1/1:13,2:15:5.71:40,6,0	1/1:20,0:18:46.63:286,47,0	1/1:25,0:24:35.44:256,35,0	1/1:13,0:13:15.32:128,15,0
chr10	45159763	.	GGA	G	1584.17	PASS	AB=1.000;AC=23;AF=0.442;AN=52;BaseQRankSum=1.550;DP=475;FS=11.449;HRun=0;HaplotypeScore=165.5274;InbreedingCoeff=0.6056;MQ=34.84;MQ0=24;MQRankSum=-3.351;QD=7.40;ReadPosRankSum=2.575;VQSLOD=2.6863;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:20:2.31:0,2,50	0/1:4,0:4:0:0,0,0	./.	./.	1/1:6,14:20:0.47:1,0,0	0/0:17,0:16:3:0,3,25	0/0:20,0:17:5.95:0,6,45	1/1:8,11:17:31.09:290,31,0	1/1:25,0:25:10.37:53,10,0	0/0:13,0:13:23.58:0,24,207	0/1:14,0:12:0:0,0,1	0/0:20,0:18:5.35:0,5,95	1/1:17,0:17:4.13:29,4,0	0/0:16,0:16:5.84:0,6,35	0/0:25,0:24:8.71:0,9,40	0/0:10,0:10:4.50:0,5,14	0/0:29,0:29:34.88:0,35,381	0/0:8,0:7:12.03:0,12,75	1/1:6,8:13:27.07:312,27,0	1/1:6,7:10:2.49:18,2,0	1/1:5,13:17:6.64:32,7,0	0/0:20,0:19:8.93:0,9,70	0/1:13,0:13:8.47:8,0,24	0/0:21,0:20:5.58:0,6,47	0/0:13,0:13:6.74:0,7,27	1/1:7,12:17:31.46:432,31,0	1/1:7,18:24:42.55:366,43,0	1/1:4,9:13:21.03:211,21,0
chr10	45159794	.	GAGAGAC	G	6265.39	PASS	AB=1.000;AC=38;AF=0.679;AN=56;BaseQRankSum=4.629;DP=574;FS=7.473;HRun=0;HaplotypeScore=161.3777;InbreedingCoeff=0.6949;MQ=64.29;MQ0=13;MQRankSum=-4.608;QD=16.36;ReadPosRankSum=0.275;VQSLOD=3.9979;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:7,30:34:15.77:184,16,0	1/1:0,9:9:5.91:55,6,0	0/0:31,0:15:41.90:0,42,405	0/0:22,0:12:35.34:0,35,379	1/1:6,11:17:9.24:134,9,0	1/1:20,0:19:2.64:24,3,0	0/1:22,0:21:80.78:148,0,81	1/1:2,24:26:60.87:708,61,0	0/1:17,0:17:35.71:36,0,168	1/1:0,15:15:38.35:450,38,0	1/1:2,14:15:3.01:38,3,0	0/0:24,0:24:49.78:0,50,690	0/0:23,0:23:45.64:0,46,439	0/0:18,0:18:44.14:0,44,500	1/1:2,23:25:9.03:198,9,0	1/1:1,20:21:9.50:177,10,0	1/1:4,17:21:10.76:265,11,0	1/1:9,2:11:5.49:419,5,0	1/1:3,17:19:17.75:716,18,0	1/1:0,16:16:23.91:312,24,0	1/1:11,10:21:24.95:283,25,0	0/0:24,0:24:44.95:0,45,629	0/0:25,0:25:50.48:0,50,580	0/0:24,0:24:29.56:0,30,451	1/1:2,17:19:2.68:38,3,0	1/1:1,19:20:60.04:981,60,0	1/1:1,20:20:33.11:720,33,0	1/1:4,5:9:20.92:379,21,0
chr10	45159978	.	CACA	C	6162.35	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=13.407;DP=641;FS=3.186;HRun=0;HaplotypeScore=91.0686;InbreedingCoeff=0.9993;MQ=83.57;MQ0=0;MQRankSum=-2.198;QD=39.76;ReadPosRankSum=3.205;VQSLOD=6.1914;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:84.26:0,84,1772	0/0:9,0:9:24.08:0,24,544	0/0:16,0:16:41.30:0,41,849	0/0:25,0:25:69.24:0,69,1386	0/0:26,0:26:72.22:0,72,1522	0/0:23,0:23:60.21:0,60,1304	0/0:18,0:18:51.13:0,51,1010	0/0:28,0:28:75.25:0,75,1627	1/1:2,20:22:48.16:798,48,0	0/0:26,0:26:72.25:0,72,1630	0/0:16,0:16:42.14:0,42,935	1/1:1,24:25:69.24:1149,69,0	1/1:2,28:30:66.23:1098,66,0	1/1:2,18:20:45.15:749,45,0	0/0:28,0:28:78.21:0,78,1683	0/0:23,0:23:69.21:0,69,1478	0/0:13,0:13:30.10:0,30,679	0/0:10,0:10:30.10:0,30,675	0/0:23,0:23:66.22:0,66,1407	0/0:33,0:33:96.30:0,96,2048	0/0:26,0:26:75.23:0,75,1565	1/1:0,24:24:63.21:1034,63,0	1/1:2,18:20:51.17:834,51,0	1/1:0,14:14:30.10:500,30,0	0/0:25,0:25:72.20:0,72,1515	0/0:28,0:28:84.29:0,84,1844	0/0:42,0:42:99:0,123,2732	0/0:16,0:16:48.13:0,48,1000
chr10	45161147	.	A	AT	6944.10	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-11.648;DP=734;FS=11.973;HRun=4;HaplotypeScore=66.9148;InbreedingCoeff=0.9976;MQ=82.41;MQ0=0;MQRankSum=-3.114;QD=34.38;ReadPosRankSum=4.522;VQSLOD=4.5876;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,114,1292	0/0:13,0:13:36.10:0,36,407	0/0:39,0:39:99:0,111,1254	0/0:30,0:30:73.89:0,74,780	0/0:16,0:16:27.61:0,28,387	0/0:18,0:17:48.14:0,48,544	0/0:38,0:38:99:0,111,1249	0/0:31,0:31:81.22:0,81,911	1/1:2,31:33:84.28:1149,84,0	0/0:26,0:26:78.22:0,78,883	0/0:22,0:22:63.18:0,63,714	1/1:1,20:21:54.18:738,54,0	1/1:0,24:24:60.20:815,60,0	1/1:1,27:28:69.23:944,69,0	0/0:42,0:42:99:0,120,1349	0/0:20,1:21:16.12:0,16,572	1/1:3,29:32:84.28:1149,84,0	0/0:24,0:24:57.14:0,57,634	0/0:19,0:19:51.14:0,51,572	0/0:32,0:32:93.70:0,94,1031	0/0:24,0:24:69.20:0,69,781	1/1:0,23:23:57.18:755,57,0	1/1:3,13:16:33.11:451,33,0	1/1:0,25:25:69.23:943,69,0	0/0:16,0:16:33.09:0,33,372	0/0:28,0:28:84.23:0,84,943	0/0:40,0:38:99:0,114,1282	0/0:14,0:14:42.12:0,42,476
chr10	45161426	.	TGACCCAGGGAATG	T	18306.02	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=13.054;DP=764;FS=3.845;HRun=0;HaplotypeScore=329.1610;InbreedingCoeff=0.9998;MQ=61.34;MQ0=1;MQRankSum=-17.605;QD=101.14;ReadPosRankSum=3.203;VQSLOD=4.4233;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,114,7162	0/0:20,0:20:60.21:0,60,3857	0/0:37,0:36:98.89:0,99,4675	0/0:28,0:28:80.81:0,81,4421	0/0:32,0:32:90.10:0,90,5666	0/0:21,0:21:60.21:0,60,3940	0/0:27,0:27:69.24:0,69,4288	0/0:26,0:26:69.24:0,69,4437	1/1:7,24:31:78.27:3111,78,0	0/0:34,0:34:99:0,99,6534	0/0:25,0:25:72.25:0,72,4414	1/1:2,19:21:57.20:2332,57,0	1/1:3,22:25:69.24:2813,69,0	1/1:3,24:27:78.27:3127,78,0	0/0:34,0:34:99:0,99,6206	0/0:26,0:26:75.24:0,75,4444	0/0:44,0:44:99:0,132,8349	0/0:17,0:17:51.17:0,51,2943	0/0:17,0:16:48.16:0,48,2806	0/0:29,0:29:78.27:0,78,5044	0/0:41,0:41:99:0,111,7151	1/1:5,25:30:75.26:3067,75,0	1/1:7,20:27:63.13:2471,63,0	1/1:5,15:19:39.47:1386,39,0	0/0:17,0:17:51.18:0,51,3091	0/0:28,0:28:84.29:0,84,5247	0/0:28,0:27:81.28:0,81,5207	0/0:9,0:9:27.09:0,27,1808
chr10	45161427	.	GA	G	1232.99	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=18.499;DP=736;FS=6.287;HRun=1;HaplotypeScore=197.9216;InbreedingCoeff=0.9996;MQ=62.53;MQ0=1;MQRankSum=-16.762;QD=7.71;ReadPosRankSum=3.291;VQSLOD=1.0867;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,117,1791	0/0:20,0:20:60.18:0,60,934	0/0:37,0:36:85.43:0,85,1346	0/0:31,0:29:73.41:0,73,1100	0/0:31,0:31:90.29:0,90,1410	0/0:20,0:20:60.20:0,60,958	0/0:24,0:24:69.24:0,69,1102	0/0:26,0:26:72.20:0,72,1101	1/1:25,1:26:65.86:258,66,0	0/0:33,0:33:99:0,99,1564	0/0:24,0:24:72.23:0,72,1122	1/1:20,0:20:47.41:167,47,0	1/1:22,1:23:57.91:228,58,0	1/1:25,1:26:66.06:267,66,0	0/0:33,0:33:99:0,99,1566	0/0:26,0:26:78.24:0,78,1193	0/0:44,0:44:99:0,132,2041	0/0:17,0:17:48.12:0,48,712	0/0:18,0:17:51.15:0,51,790	0/0:28,0:28:81.23:0,81,1229	0/0:41,0:41:99:0,111,1725	1/1:25,0:25:62.38:219,62,0	1/1:20,1:21:50.41:193,50,0	1/1:17,2:18:27.63:99,28,0	0/0:17,0:17:51.17:0,51,815	0/0:28,0:28:84.28:0,84,1323	0/0:27,0:26:81.26:0,81,1268	0/0:9,0:9:27.09:0,27,431
chr10	45161731	.	C	CAG	12488.76	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-14.783;DP=813;FS=1.623;HRun=0;HaplotypeScore=87.9847;InbreedingCoeff=0.9975;MQ=65.02;MQ0=1;MQRankSum=-0.225;QD=45.58;ReadPosRankSum=2.231;VQSLOD=6.4701;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,117,1701	0/0:18,0:18:54.18:0,54,792	0/0:28,0:27:78.22:0,78,1110	0/0:22,0:21:51.14:0,51,683	0/0:30,0:30:87.28:0,87,1258	0/0:21,0:21:63.21:0,63,919	0/0:35,0:35:99:0,99,1455	1/1:2,24:27:72.23:1316,72,0	1/1:2,20:21:45.15:843,45,0	0/0:38,0:38:99:0,114,1660	0/0:23,0:23:69.23:0,69,1012	1/1:3,25:28:72.25:1331,72,0	1/1:1,40:41:99:1834,99,0	1/1:1,30:33:87.30:1629,87,0	0/0:39,0:39:99:0,111,1611	0/0:19,0:18:54.17:0,54,777	1/1:4,36:40:99:1908,102,0	0/0:37,0:37:84.35:0,84,1427	0/0:22,0:22:57.19:0,57,839	0/0:34,0:34:99:0,99,1429	0/0:45,0:45:99:0,126,1833	1/1:1,21:22:54.19:1009,54,0	1/1:2,30:32:75.09:1401,75,0	1/1:1,28:29:66.23:1218,66,0	0/0:20,0:20:51.17:0,51,751	0/0:34,0:34:93.31:0,93,1351	0/0:28,0:28:84.28:0,84,1230	0/0:6,0:6:15.05:0,15,219
chr10	45163967	.	T	TG	1493.72	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-7.233;DP=183;FS=6.110;HRun=2;HaplotypeScore=16.6071;InbreedingCoeff=0.8519;MQ=60.67;MQ0=6;MQRankSum=1.294;QD=34.74;ReadPosRankSum=0.737;VQSLOD=2.5144;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:27.08:0,27,334	0/0:2,0:2:6.02:0,6,74	0/0:11,0:3:6.02:0,6,74	0/0:13,0:6:15.03:0,15,171	0/0:6,0:6:18.06:0,18,223	0/0:7,0:7:18.06:0,18,223	0/0:5,0:5:15.05:0,15,186	0/0:8,0:7:18.01:0,18,206	1/1:0,9:9:27.09:389,27,0	0/0:5,0:4:12.04:0,12,149	0/0:4,0:4:12.04:0,12,149	1/1:0,7:7:18.06:259,18,0	1/1:0,1:1:3.01:43,3,0	1/1:0,6:6:15.05:216,15,0	0/0:6,0:6:18.06:0,18,223	0/0:4,0:4:12.04:0,12,149	1/1:0,7:7:18.06:259,18,0	0/0:5,0:5:15.05:0,15,186	0/0:3,0:3:9.03:0,9,112	0/0:7,0:7:21.07:0,21,260	0/0:14,0:14:42.13:0,42,519	1/1:0,5:5:15.05:216,15,0	1/1:0,7:7:18.06:259,18,0	1/1:0,1:1:3.01:43,3,0	0/0:5,0:5:15.05:0,15,186	0/0:6,0:6:15.04:0,15,174	0/0:14,0:14:42.11:0,42,496	0/0:6,0:6:18.06:0,18,223
chr10	45164282	.	CTGGGG	C	1596.07	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.838;DP=625;FS=7.456;HRun=0;HaplotypeScore=115.8894;InbreedingCoeff=0.9975;MQ=85.37;MQ0=0;MQRankSum=-4.512;QD=48.37;ReadPosRankSum=2.157;VQSLOD=3.4449;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,23:26:63.22:1322,63,0	1/1:3,4:7:21:395,21,0	0/0:25,0:25:69.22:0,69,1973	0/0:21,0:21:39.82:0,40,1454	0/0:21,0:21:57.15:0,57,1666	0/0:15,0:15:39.13:0,39,1210	0/0:25,0:25:69.24:0,69,2137	0/0:39,0:39:99:0,99,2696	0/0:22,0:22:63.22:0,63,1954	0/0:26,0:26:66.20:0,66,1812	0/0:19,0:19:57.20:0,57,1730	0/0:32,0:32:93.30:0,93,2790	0/0:21,0:21:60.17:0,60,1644	0/0:26,0:26:72.25:0,72,2150	0/0:29,0:29:81.28:0,81,2479	0/0:24,0:24:69.22:0,69,2042	0/0:15,0:14:42.14:0,42,1302	0/0:14,0:14:39.13:0,39,1206	0/0:22,0:22:63.19:0,63,1767	0/0:17,0:17:51.16:0,51,1514	0/0:32,0:32:90.29:0,90,2671	0/0:26,0:26:69.21:0,69,1934	0/0:13,0:13:30.09:0,30,819	0/0:21,0:21:54.16:0,54,1539	0/0:19,0:19:54.19:0,54,1673	0/0:18,0:18:51.18:0,51,1581	0/0:36,0:35:99:0,105,3031	0/0:14,0:14:42.12:0,42,1231
chr10	45164348	.	T	TA	1246.59	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-4.578;DP=682;FS=6.268;HRun=10;HaplotypeScore=68.1258;InbreedingCoeff=0.9006;MQ=73.92;MQ0=0;MQRankSum=-0.719;QD=23.09;ReadPosRankSum=0.035;VQSLOD=4.4306;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,42:49:56.03:1205,56,0	1/1:0,5:5:15.04:160,15,0	0/0:18,0:18:15.14:0,15,233	0/0:6,0:7:2.98:0,3,23	0/0:22,0:22:32.77:0,33,419	0/0:17,0:17:44.93:0,45,369	0/0:33,0:33:95.89:0,96,788	0/0:24,0:24:50.90:0,51,418	0/0:23,0:25:64:0,64,504	0/0:28,0:29:79.93:0,80,644	0/0:17,0:17:41.94:0,42,345	0/0:30,0:30:68.82:0,69,558	0/0:14,0:14:38.95:0,39,320	0/0:26,0:27:73.95:0,74,597	0/0:35,0:35:92.89:0,93,764	0/0:22,0:22:59.92:0,60,493	0/0:25,0:25:71.88:0,72,585	0/0:15,0:15:35.93:0,36,296	0/0:26,1:27:24.18:0,24,406	0/0:20,0:20:44.93:0,45,369	0/0:48,0:48:99:0,132,1076	0/0:25,0:25:65.92:0,66,542	0/0:20,0:20:50.92:0,51,419	0/0:28,0:27:77.91:0,78,640	0/0:24,0:24:65.92:0,66,542	0/0:29,0:29:74.90:0,75,614	0/0:24,0:25:55.94:0,56,449	0/0:21,0:21:47.91:0,48,394
chr10	45165947	.	A	AT	5105.39	PASS	AB=1.000;AC=36;AF=0.643;AN=56;BaseQRankSum=-8.753;DP=304;FS=12.815;HRun=5;HaplotypeScore=37.3528;InbreedingCoeff=0.5135;MQ=66.79;MQ0=3;MQRankSum=6.312;QD=20.34;ReadPosRankSum=-0.999;VQSLOD=2.7644;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,18:19:42.14:552,42,0	1/1:2,6:8:11.90:157,12,0	0/1:17,0:8:2.53:3,0,35	0/0:14,0:6:1.92:0,2,37	1/1:0,11:11:33.04:408,33,0	0/0:16,0:16:36.08:0,36,171	0/0:3,0:2:2.74:0,3,12	1/1:34,0:34:16.87:155,17,0	0/0:1,0:1:0:0,0,0	1/1:3,5:8:15.03:172,15,0	1/1:1,7:8:21.07:275,21,0	0/0:9,0:9:2.50:0,2,8	0/0:5,0:5:4.66:0,5,16	0/1:9,0:9:8.58:17,0,9	1/1:0,9:9:18.06:237,18,0	1/1:2,5:7:12.04:158,12,0	0/1:13,0:13:0.85:52,0,1	1/1:0,22:22:57.19:748,57,0	1/1:2,16:18:48.13:600,48,0	1/1:0,10:10:24.04:297,24,0	1/1:0,6:6:6.02:78,6,0	0/0:2,0:2:0.89:0,1,3	0/1:10,0:10:0.78:60,0,1	0/0:3,0:3:0:0,0,1	1/1:2,11:13:27.09:355,27,0	1/1:3,9:12:24.04:273,24,0	1/1:1,12:13:30.10:394,30,0	1/1:0,4:4:9.03:118,9,0
chr10	45165951	.	TTA	T	176.79	PASS	AB=1.000;AC=6;AF=0.107;AN=56;BaseQRankSum=2.909;DP=309;FS=0.853;HRun=0;HaplotypeScore=62.1541;InbreedingCoeff=0.4313;MQ=72.45;MQ0=3;MQRankSum=-3.547;QD=5.70;ReadPosRankSum=-1.568;VQSLOD=2.5313;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:42.12:0,42,481	0/0:8,0:8:17.85:0,18,219	0/0:19,0:10:7.19:0,7,124	0/0:15,0:7:11.69:0,12,107	0/0:14,0:14:42.07:0,42,457	1/1:6,10:16:24.44:226,24,0	1/1:2,1:2:5.91:40,6,0	0/0:34,0:34:51.63:0,52,787	0/0:1,0:1:3:0,3,27	0/0:7,0:7:21.02:0,21,207	0/0:8,0:8:24.07:0,24,276	0/0:10,0:10:27.46:0,27,241	0/0:4,0:4:9.02:0,9,96	0/1:9,0:9:21.32:21,0,173	0/0:9,0:9:18.05:0,18,206	0/0:7,0:7:15.03:0,15,162	0/0:11,0:11:32.99:0,33,295	0/0:23,0:23:60.17:0,60,686	0/0:17,0:17:51.13:0,51,580	0/0:13,0:13:39.06:0,39,452	0/0:6,0:6:6.02:0,6,69	0/1:3,0:3:15.71:16,0,47	0/0:11,0:11:6.31:0,6,223	0/0:3,0:3:9:0,9,81	0/0:11,0:11:27.08:0,27,308	0/0:10,0:10:26.65:0,27,302	0/0:15,0:15:39.07:0,39,415	0/0:4,0:4:9.03:0,9,103
chr10	45165952	.	TA	T	347.55	PASS	AB=1.000;AC=8;AF=0.143;AN=56;BaseQRankSum=0.738;DP=307;FS=0.823;HRun=9;HaplotypeScore=56.1092;InbreedingCoeff=0.3333;MQ=72.47;MQ0=3;MQRankSum=-2.867;QD=6.68;ReadPosRankSum=-2.407;VQSLOD=0.3601;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:41.54:0,42,282	0/0:7,0:7:14.82:0,15,116	0/0:19,0:10:11.56:0,12,115	0/0:15,0:7:5.85:0,6,46	0/0:14,0:14:38.64:0,39,274	1/1:11,5:16:39.01:348,39,0	1/1:3,0:2:5.93:44,6,0	0/0:34,0:34:24.21:0,24,259	0/0:1,0:1:2.74:0,3,12	0/0:8,0:8:17.91:0,18,143	0/0:8,0:8:23.78:0,24,169	0/1:9,0:9:3.16:3,0,55	0/0:4,0:4:8.61:0,9,52	0/1:10,0:10:48.23:48,0,53	0/0:8,0:8:17.80:0,18,121	0/0:6,0:6:11.87:0,12,81	0/0:11,0:11:22.46:0,22,110	0/0:23,0:23:59.35:0,59,406	0/0:17,0:17:50.54:0,51,366	0/0:13,0:13:35.78:0,36,282	0/0:6,0:6:5.93:0,6,41	0/1:3,0:3:7.58:18,0,8	0/1:11,0:11:20.47:20,0,64	0/0:3,0:3:8.23:0,8,37	0/0:11,0:11:26.69:0,27,181	0/0:10,0:10:23.45:0,23,174	0/0:15,0:15:38.64:0,39,271	0/0:4,0:4:8.90:0,9,61
chr10	45166980	.	T	TTCTCTG	4974.63	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=3.673;DP=707;FS=0.517;HRun=0;HaplotypeScore=157.9024;InbreedingCoeff=0.7762;MQ=86.83;MQ0=0;MQRankSum=-11.710;QD=52.92;ReadPosRankSum=-2.902;VQSLOD=4.4972;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,132,3162	0/0:5,0:5:15.05:0,15,360	0/0:19,0:19:45.15:0,45,996	0/0:32,0:32:74.71:0,75,1575	0/0:19,0:19:48.14:0,48,1006	1/1:9,19:30:69.24:2320,69,0	1/1:12,18:32:78.27:2634,78,0	0/1:32,0:32:20.36:20,0,656	0/0:18,0:18:51.18:0,51,1226	0/0:28,0:28:81.27:0,81,1824	0/0:15,0:15:42.14:0,42,1009	0/0:31,0:31:90.30:0,90,2117	0/0:20,0:20:57.20:0,57,1370	0/0:29,0:29:87.28:0,87,1926	0/0:35,0:35:99:0,102,2400	0/0:15,0:15:45.15:0,45,1063	0/0:29,0:29:78.27:0,78,1810	0/0:38,0:38:99:0,111,2469	0/0:20,0:20:54.18:0,54,1235	0/0:26,0:26:78.26:0,78,1774	0/0:37,0:37:99:0,102,2431	0/0:16,0:16:48.16:0,48,1134	0/0:21,0:21:57.17:0,57,1301	0/0:33,0:33:99:0,99,2191	0/0:19,0:19:57.20:0,57,1316	0/0:16,0:16:45.15:0,45,1065	0/0:35,0:35:99:0,102,2426	0/0:9,0:9:27.09:0,27,649
chr10	45166982	.	CAGCT	C	1531.18	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.829;DP=687;FS=15.759;HRun=0;HaplotypeScore=128.0199;InbreedingCoeff=0.9840;MQ=85.79;MQ0=0;MQRankSum=-8.203;QD=58.89;ReadPosRankSum=-2.959;VQSLOD=3.8570;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,141,4059	0/0:5,0:5:15.05:0,15,434	0/0:18,0:18:53.93:0,54,1309	0/0:31,0:31:83.73:0,84,2206	0/0:18,0:18:51.17:0,51,1444	0/0:24,0:24:60.17:0,60,982	0/0:27,0:27:66.10:0,66,1047	1/1:0,26:26:78.27:1626,78,0	0/0:18,0:18:54.19:0,54,1562	0/0:28,0:28:84.28:0,84,2321	0/0:16,0:16:45.15:0,45,1287	0/0:30,0:30:90.31:0,90,2607	0/0:20,0:20:57.20:0,57,1632	0/0:29,0:29:87.28:0,87,2458	0/0:35,0:35:99:0,105,3042	0/0:15,0:15:45.15:0,45,1304	0/0:26,0:26:78.27:0,78,2196	0/0:38,0:38:99:0,114,3208	0/0:20,0:20:60.21:0,60,1719	0/0:27,0:27:81.28:0,81,2306	0/0:36,0:36:99:0,105,3028	0/0:16,0:16:48.16:0,48,1391	0/0:23,0:23:69.17:0,69,1865	0/0:35,0:35:99:0,105,2883	0/0:19,0:19:57.20:0,57,1608	0/0:15,0:15:45.15:0,45,1305	0/0:35,0:35:99:0,105,2983	0/0:10,0:10:30.10:0,30,867
chr10	45168290	.	CCCAGGACAG	C	11516.72	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=16.072;DP=699;FS=19.048;HRun=0;HaplotypeScore=204.1592;InbreedingCoeff=0.9860;MQ=58.41;MQ0=0;MQRankSum=-17.117;QD=55.37;ReadPosRankSum=3.216;VQSLOD=2.9904;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,34:40:60.16:1698,60,0	1/1:2,5:7:12.04:353,12,0	0/0:28,0:28:66.22:0,66,2716	0/0:32,0:30:77.63:0,78,2938	0/0:15,0:15:39.09:0,39,1513	0/0:23,0:23:66.23:0,66,3085	0/0:28,0:28:81.17:0,81,3294	0/0:26,0:26:60.21:0,60,2640	1/1:3,20:23:57.20:1676,57,0	0/0:31,0:30:87.30:0,87,3902	0/0:24,0:24:60.17:0,60,2579	1/1:6,21:27:45.14:1325,45,0	1/1:4,19:23:51.18:1501,51,0	1/1:1,21:22:54.14:1521,54,0	0/0:30,0:30:81.25:0,81,3470	0/0:19,0:19:57.20:0,57,2688	0/0:42,0:42:99:0,117,5430	0/0:25,0:25:69.22:0,69,3152	0/0:18,0:18:51.18:0,51,2243	0/0:29,0:29:81.26:0,81,3618	0/0:36,0:36:99:0,102,4532	1/1:4,17:21:45.15:1324,45,0	1/1:3,16:19:38.70:1147,39,0	1/1:6,20:26:33.11:971,33,0	0/0:19,0:19:51.18:0,51,2416	0/0:30,0:30:78.27:0,78,3379	0/0:33,0:32:93.30:0,93,4140	0/0:3,0:3:9.03:0,9,427
chr10	45168636	.	GTC	G	7760.35	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=13.061;DP=776;FS=1.351;HRun=0;HaplotypeScore=92.4260;InbreedingCoeff=0.9996;MQ=65.16;MQ0=2;MQRankSum=-0.708;QD=37.31;ReadPosRankSum=2.034;VQSLOD=6.4442;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,51:54:99:2038,144,0	0/0:8,0:8:24.08:0,24,440	0/0:25,0:24:66.06:0,66,1132	0/0:30,0:29:84.25:0,84,1436	0/0:19,0:19:54.17:0,54,950	0/0:22,0:22:63.22:0,63,1141	0/0:29,0:29:84.27:0,84,1501	0/0:26,0:26:72.25:0,72,1312	0/0:30,0:30:90.29:0,90,1612	1/1:1,19:20:57.17:797,57,0	1/1:2,16:18:39.13:543,39,0	0/0:32,0:32:93.31:0,93,1658	0/0:33,0:33:99:0,99,1813	0/0:27,0:27:78.27:0,78,1421	1/1:3,34:37:99:1417,99,0	1/1:0,29:29:78.26:1117,78,0	0/0:42,0:42:99:0,126,2295	1/1:0,21:21:60.20:859,60,0	0/0:16,0:16:45.15:0,45,819	0/0:24,0:24:57.20:0,57,1032	0/0:49,0:49:99:0,141,2547	0/0:29,0:29:87.30:0,87,1586	0/0:30,0:30:87.30:0,87,1578	0/0:30,0:30:84.27:0,84,1497	1/1:1,28:28:69.23:988,69,0	0/0:21,0:21:63.20:0,63,1121	0/0:35,0:35:99:0,102,1828	0/0:11,0:11:33.11:0,33,605
chr10	45169243	.	GA	G	3494.14	PASS	AB=0.828;AC=33;AF=0.589;AN=56;BaseQRankSum=10.779;DP=674;FS=0.701;HRun=12;HaplotypeScore=86.9962;InbreedingCoeff=0.8073;MQ=67.26;MQ0=10;MQRankSum=1.835;QD=8.65;ReadPosRankSum=3.823;VQSLOD=2.8850;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,31:42:81.72:615,82,0	1/1:0,6:6:17.93:139,18,0	0/0:52,0:14:20.75:0,21,161	0/1:37,0:13:16.73:17,0,63	0/0:27,0:28:68.54:0,69,652	0/0:29,3:32:8.42:0,8,618	0/0:14,1:15:18.68:0,19,356	1/1:8,1:32:38.35:133,38,0	1/1:5,11:16:26.84:209,27,0	1/1:2,1:23:39.64:129,40,0	1/1:1,1:17:27.41:94,27,0	1/1:5,12:18:34.83:257,35,0	1/1:3,13:17:40.66:307,41,0	1/1:2,17:19:41.83:324,42,0	1/1:2,1:24:39.64:129,40,0	1/1:1,0:15:24.44:71,24,0	0/0:28,0:29:83.78:0,84,797	1/1:5,0:35:57.03:165,57,0	0/1:22,2:24:8.06:8,0,460	0/0:31,2:34:31.51:0,32,668	0/0:15,1:17:18.63:0,19,344	1/1:3,20:24:49.55:377,50,0	0/1:3,11:14:0.88:178,0,1	1/1:5,16:21:32.85:255,33,0	1/1:3,0:18:29.70:87,30,0	0/0:24,0:26:50.76:0,51,479	0/0:20,0:20:54.08:0,54,534	0/0:14,1:17:18.68:0,19,356
chr10	45169777	.	CCT	C	4934.12	PASS	AB=0.516;AC=13;AF=0.232;AN=56;BaseQRankSum=11.877;DP=534;FS=5.662;HRun=0;HaplotypeScore=61.9210;InbreedingCoeff=0.8944;MQ=81.33;MQ0=0;MQRankSum=-1.628;QD=36.82;ReadPosRankSum=3.208;VQSLOD=6.9250;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:78.15:0,78,1418	0/0:10,0:10:27.09:0,27,547	0/0:12,0:12:36.11:0,36,664	0/0:16,0:16:38.23:0,38,736	1/1:0,18:18:36.03:527,36,0	0/0:15,0:15:45.13:0,45,843	0/0:29,0:29:87.28:0,87,1729	0/0:27,0:27:81.23:0,81,1472	0/0:21,0:21:63.20:0,63,1243	0/0:17,0:17:48.15:0,48,906	0/0:9,0:9:18.05:0,18,331	0/0:23,0:23:66.17:0,66,1151	0/0:21,0:21:63.19:0,63,1202	0/0:22,0:22:66.21:0,66,1304	0/0:24,0:24:72.23:0,72,1426	0/0:24,0:24:72.23:0,72,1425	0/0:33,0:32:99:0,99,1918	0/0:13,0:13:33.11:0,33,670	1/1:0,10:10:27.09:438,27,0	1/1:0,13:13:33.04:503,33,0	1/1:0,34:34:60.20:975,60,0	0/0:14,0:14:39.13:0,39,755	0/0:6,0:6:18.05:0,18,329	0/0:31,0:31:90.23:0,90,1694	0/0:6,0:6:18.04:0,18,295	0/1:1,15:16:15.79:638,0,16	1/1:0,37:37:99:1609,99,0	1/1:0,6:6:15.05:244,15,0
chr10	45170029	.	CAA	C	6700.35	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=14.232;DP=523;FS=0.359;HRun=2;HaplotypeScore=62.9891;InbreedingCoeff=0.9696;MQ=79.94;MQ0=0;MQRankSum=-3.264;QD=44.67;ReadPosRankSum=3.003;VQSLOD=4.8017;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,20:20:51.17:830,51,0	0/0:7,0:7:21.06:0,21,391	0/0:12,0:12:36.12:0,36,695	0/0:14,0:14:42.14:0,42,803	0/0:30,0:30:90.31:0,90,1818	1/1:0,18:18:51.17:831,51,0	1/1:0,15:15:36.12:587,36,0	0/0:33,0:33:99:0,99,2001	1/1:0,16:16:48.16:783,48,0	0/0:25,0:24:75.26:0,75,1520	0/0:29,0:29:87.28:0,87,1721	1/1:0,14:14:39.13:636,39,0	1/1:0,13:13:33.11:538,33,0	1/1:0,12:12:36.12:587,36,0	0/0:27,0:27:78.26:0,78,1536	0/0:16,1:17:2.26:0,2,917	0/0:26,0:26:75.26:0,75,1524	0/0:16,0:16:45.15:0,45,914	0/0:22,0:22:63.22:0,63,1280	0/0:24,0:24:72.23:0,72,1427	0/0:8,0:8:24.08:0,24,488	1/1:0,18:18:48.16:783,48,0	1/1:0,16:16:48.16:783,48,0	1/1:0,8:8:21.07:342,21,0	0/0:18,0:18:54.17:0,54,1041	0/0:21,0:21:63.22:0,63,1273	0/0:31,0:31:93.31:0,93,1848	0/0:13,0:13:39.13:0,39,793
chr10	45170155	.	TAA	T	1574.16	PASS	AB=0.752;AC=19;AF=0.339;AN=56;BaseQRankSum=-0.679;DP=443;FS=13.224;HRun=15;HaplotypeScore=78.0951;InbreedingCoeff=0.5921;MQ=71.25;MQ0=5;MQRankSum=1.081;QD=8.16;ReadPosRankSum=4.694;VQSLOD=-0.0646;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:27:52.99:0,53,528	0/1:5,1:6:14.42:14,0,77	0/1:36,0:14:7.02:7,0,74	0/0:24,0:14:13.06:0,13,99	1/1:2,13:16:35.92:313,36,0	0/0:16,0:17:41.54:0,42,452	0/0:12,0:14:32.56:0,33,381	0/0:19,0:21:46.99:0,47,486	0/0:15,0:20:38.04:0,38,398	0/0:1,0:4:5.88:0,6,19	0/1:5,1:12:11.45:11,0,105	0/0:13,0:13:27.02:0,27,299	0/0:16,0:19:44.04:0,44,490	0/0:11,0:11:27.07:0,27,347	0/0:6,1:18:1.90:0,2,76	0/1:7,1:15:0.45:0,0,118	0/0:14,0:20:52.56:0,53,544	0/0:4,0:13:21.35:0,21,86	1/1:4,7:13:20.28:195,20,0	1/1:6,18:24:35.67:316,36,0	1/1:2,6:9:14.69:117,15,0	0/0:6,0:7:11.51:0,12,115	0/0:14,0:15:14.28:0,14,410	0/0:7,0:7:12.04:0,12,159	0/1:4,1:9:7.58:8,0,65	1/1:2,5:8:8.82:123,9,0	1/1:9,19:29:38.76:488,39,0	1/1:4,7:12:21.92:173,22,0
chr10	45170179	.	GA	G	1224.51	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=11.882;DP=517;FS=0.000;HRun=1;HaplotypeScore=89.9762;InbreedingCoeff=0.9034;MQ=79.81;MQ0=7;MQRankSum=-5.408;QD=7.29;ReadPosRankSum=1.112;VQSLOD=0.6224;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:66.17:0,66,980	1/1:8,0:8:19.38:109,19,0	0/0:44,1:23:42.44:0,42,528	0/1:33,0:17:4.91:5,0,159	0/0:21,0:21:45.98:0,46,724	0/0:17,0:17:48.13:0,48,674	0/0:18,0:18:51.12:0,51,715	1/1:29,1:30:45.84:248,46,0	0/0:12,0:12:28.62:0,29,375	1/1:16,0:16:40.75:184,41,0	1/1:18,1:19:47.06:243,47,0	0/0:14,0:14:42.12:0,42,622	0/0:20,0:20:42.03:0,42,672	0/0:12,0:12:36.01:0,36,471	1/1:21,0:21:15.03:146,15,0	1/1:14,0:14:5.92:195,6,0	0/0:22,0:22:57.53:0,58,798	1/1:15,1:16:23.38:186,23,0	0/0:20,0:20:60.16:0,60,833	0/0:24,0:24:63.21:0,63,975	0/0:9,0:8:21.02:0,21,261	0/0:6,0:6:12.01:0,12,158	0/0:16,0:16:23.59:0,24,559	0/0:6,0:6:13.85:0,14,209	1/1:11,0:11:20.44:111,20,0	0/0:15,0:15:36.53:0,37,630	0/0:31,0:31:82.13:0,82,1356	0/0:15,0:15:42.14:0,42,666
chr10	45170180	.	AT	A	3976.79	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=6.376;DP=512;FS=12.857;HRun=4;HaplotypeScore=78.8812;InbreedingCoeff=0.9832;MQ=80.09;MQ0=7;MQRankSum=-2.093;QD=29.90;ReadPosRankSum=0.494;VQSLOD=2.7904;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:68.48:0,68,841	1/1:0,8:8:21.06:251,21,0	0/0:45,0:23:52.26:0,52,480	0/0:31,0:17:17.96:0,18,202	0/0:22,0:22:59.07:0,59,695	0/0:17,0:17:48.10:0,48,617	0/0:17,0:17:48.11:0,48,616	1/1:3,27:30:86.97:943,87,0	0/0:11,0:11:26.99:0,27,332	1/1:1,15:16:47.98:553,48,0	1/1:2,17:19:53.79:595,54,0	0/0:14,0:14:42.14:0,42,585	0/0:20,0:20:49.87:0,50,638	0/0:12,0:12:36.12:0,36,486	1/1:3,16:19:41.91:471,42,0	1/1:1,13:14:31.70:422,32,0	0/0:23,0:23:59.99:0,60,716	1/1:4,12:16:44.88:471,45,0	0/0:19,0:19:54.15:0,54,708	0/0:23,0:23:63.20:0,63,863	0/0:9,0:8:20.84:0,21,231	0/0:6,0:6:14.97:0,15,167	0/0:16,0:16:42.94:0,43,523	0/0:6,0:6:17.89:0,18,223	1/1:0,11:11:24.03:270,24,0	0/0:14,1:15:9.18:0,9,551	0/0:31,0:31:89.71:0,90,1182	0/0:15,0:15:42.14:0,42,587
chr10	45170385	.	CGTGT	C	188.80	PASS	AB=0.938;AC=15;AF=0.682;AN=22;BaseQRankSum=0.817;DP=480;FS=0.000;HRun=0;HaplotypeScore=72.4993;InbreedingCoeff=0.1067;MQ=70.22;MQ0=25;MQRankSum=-0.696;QD=1.13;ReadPosRankSum=0.978;VQSLOD=1.4223;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:25,1:24:36.20:36,0,39	./.	./.	./.	./.	./.	0/0:20,0:19:0.47:0,0,1	./.	1/1:11,1:11:3.01:45,3,0	./.	1/1:13,0:12:3.01:44,3,0	1/1:15,0:15:2.96:19,3,0	./.	./.	./.	1/1:12,2:14:3.01:45,3,0	0/1:25,1:26:0.41:51,0,0	./.	./.	./.	0/1:21,0:24:0:0,0,0	1/1:16,0:17:0.47:1,0,0	./.	./.	./.	1/1:19,0:20:3:28,3,0	./.	0/0:12,0:12:3.01:0,3,32
chr10	45173427	.	GA	G	4685.01	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=13.843;DP=589;FS=2.459;HRun=7;HaplotypeScore=54.5196;InbreedingCoeff=0.9902;MQ=74.20;MQ0=0;MQRankSum=-0.133;QD=27.08;ReadPosRankSum=0.198;VQSLOD=5.4667;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:57.14:0,57,699	1/1:0,8:8:18.04:184,18,0	0/0:16,0:16:38.75:0,39,477	0/0:5,0:5:12.03:0,12,133	0/0:29,0:29:84.27:0,84,1056	0/0:28,0:28:78.24:0,78,967	0/0:14,0:14:39.12:0,39,490	1/1:0,32:32:96.21:973,96,0	0/0:20,0:20:57.17:0,57,706	1/1:2,28:30:78.12:774,78,0	1/1:0,34:34:96.21:979,96,0	0/0:12,0:12:24.08:0,24,302	0/0:14,0:14:33.11:0,33,415	0/0:12,0:12:33.11:0,33,415	1/1:1,14:15:30.07:306,30,0	1/1:0,16:16:48.11:490,48,0	0/0:33,0:33:90.28:0,90,1119	1/1:3,21:24:60.13:612,60,0	0/0:26,1:27:47.64:0,48,913	0/0:39,0:39:99:0,105,1295	0/0:12,0:12:33.11:0,33,415	0/0:27,0:27:75.24:0,75,939	0/0:25,0:25:72.20:0,72,879	0/0:10,0:10:30.09:0,30,365	1/1:1,13:14:36.08:367,36,0	0/0:32,0:32:93.29:0,93,1160	0/0:33,0:33:90.29:0,90,1132	0/0:6,0:6:15.04:0,15,177
chr10	45174616	.	A	AAAAG	3641.09	PASS	AB=0.914;AC=18;AF=0.321;AN=56;BaseQRankSum=-0.482;DP=430;FS=5.319;HRun=0;HaplotypeScore=109.7258;InbreedingCoeff=0.5634;MQ=52.51;MQ0=2;MQRankSum=-2.813;QD=23.64;ReadPosRankSum=-0.122;VQSLOD=3.2723;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:22:10.07:0,10,94	1/1:3,1:4:3.01:58,3,0	0/0:9,0:6:10.61:0,11,114	0/0:15,0:7:4.61:0,5,94	0/0:38,0:38:81.23:0,81,1220	0/0:12,0:12:20.87:0,21,160	0/0:16,0:15:17.49:0,17,113	0/1:15,9:24:7.80:382,0,8	0/0:13,0:10:6:0,6,54	1/1:9,7:16:36.12:858,36,0	1/1:9,3:12:18.06:382,18,0	0/0:14,0:14:8.97:0,9,73	0/1:17,0:17:23.32:23,0,120	0/0:12,0:11:6:0,6,52	1/1:6,3:9:21.07:465,21,0	1/1:14,1:15:24.08:560,24,0	0/0:22,0:21:48.09:0,48,750	1/1:11,1:12:12.04:262,12,0	0/0:15,0:14:21.06:0,21,303	0/0:19,0:18:24.08:0,24,366	0/0:10,0:10:23.66:0,24,373	0/0:13,0:12:5.90:0,6,46	0/0:15,0:15:22.13:0,22,139	0/1:12,0:11:30.94:31,0,53	1/1:11,4:15:27.07:587,27,0	0/1:15,1:16:33.64:34,0,490	0/0:17,0:17:39.13:0,39,615	0/0:12,0:12:27.06:0,27,374
chr10	45174624	.	GAAAGAAAGAACA	G	1693.54	PASS	AB=0.967;AC=23;AF=0.411;AN=56;BaseQRankSum=4.100;DP=395;FS=24.443;HRun=0;HaplotypeScore=157.7925;InbreedingCoeff=0.1312;MQ=53.68;MQ0=5;MQRankSum=-3.192;QD=7.99;ReadPosRankSum=1.977;VQSLOD=1.0809;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:9,12:19:4.89:479,0,5	1/1:4,0:4:3:25,3,0	0/0:10,0:6:12.04:0,12,208	0/0:18,0:8:13.79:0,14,220	0/0:34,0:34:81.27:0,81,2096	0/1:11,0:11:34.88:35,0,153	0/0:14,0:13:17.87:0,18,129	0/1:21,0:21:20.96:21,0,371	0/1:10,0:8:9.10:9,0,16	0/1:15,0:15:83.41:83,0,178	0/1:12,0:12:15.90:99,0,16	1/1:11,0:11:7.07:29,7,0	1/1:16,0:16:34:298,34,0	1/1:10,0:9:5.84:42,6,0	0/1:9,0:9:26.12:107,0,26	0/1:13,0:13:12.82:13,0,100	0/0:22,0:21:53.92:0,54,1901	0/1:11,0:10:27.65:103,0,28	0/0:15,0:14:27.08:0,27,580	0/0:18,0:17:24.08:0,24,589	0/0:10,0:9:8.44:0,8,546	1/1:12,0:11:13.38:123,13,0	1/1:13,0:13:24.04:143,24,0	0/1:11,0:10:20.86:167,0,21	0/1:12,0:12:99:99,0,122	0/0:16,0:16:5.54:0,6,780	0/0:15,0:15:39.13:0,39,1103	0/0:11,0:11:27.09:0,27,690
chr10	45174628	.	GAAAGAACA	G	3665.31	PASS	AB=0.989;AC=28;AF=0.500;AN=56;BaseQRankSum=1.730;DP=376;FS=16.878;HRun=0;HaplotypeScore=119.0778;InbreedingCoeff=0.3574;MQ=53.56;MQ0=5;MQRankSum=-3.904;QD=16.81;ReadPosRankSum=0.375;VQSLOD=1.9381;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:18:15.04:273,15,0	1/1:4,0:4:2.99:24,3,0	0/0:11,0:5:5.65:0,6,175	0/0:16,0:7:14.08:0,14,170	0/0:32,0:32:81.27:0,81,1883	0/1:9,1:10:25.91:148,0,26	0/1:16,0:15:14.89:16,0,15	0/1:20,0:20:65.19:65,0,293	0/1:9,0:7:4.63:5,0,7	0/1:15,0:15:99:107,0,127	1/1:10,0:10:14.31:155,14,0	1/1:2,9:11:9.03:237,9,0	1/1:8,6:14:36.12:804,36,0	1/1:2,8:9:6.02:165,6,0	1/1:8,0:8:1.26:115,1,0	0/1:13,0:13:16.74:68,0,17	0/0:19,0:18:54.05:0,54,1512	0/1:11,0:10:5.18:97,0,5	0/0:11,0:10:27.08:0,27,540	0/0:20,0:19:24.08:0,24,518	0/0:10,0:9:23.25:0,23,493	1/1:0,11:10:15.05:262,15,0	1/1:10,3:13:30.10:713,30,0	1/1:10,1:9:23.54:314,24,0	0/1:12,0:12:56.86:96,0,57	0/0:14,0:14:5.55:0,6,800	0/0:14,0:14:39.13:0,39,953	0/0:11,0:11:27.09:0,27,665
chr10	45174632	.	GAACA	G	3525.69	PASS	AB=0.916;AC=33;AF=0.589;AN=56;BaseQRankSum=1.811;DP=345;FS=19.255;HRun=0;HaplotypeScore=90.2655;InbreedingCoeff=0.6401;MQ=53.88;MQ0=6;MQRankSum=-1.515;QD=18.56;ReadPosRankSum=0.459;VQSLOD=1.6509;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:15,2:15:18.01:214,18,0	1/1:2,0:2:2.99:24,3,0	0/0:11,0:5:2.23:0,2,150	0/0:14,0:6:13.52:0,14,141	0/0:30,0:30:81.27:0,81,1709	1/1:4,6:10:30.10:536,30,0	1/1:0,15:14:18.06:348,18,0	0/1:16,0:16:17.38:17,0,252	1/1:3,1:4:6.02:116,6,0	0/1:12,1:13:33.79:124,0,34	1/1:7,1:8:14.16:156,14,0	1/1:9,0:9:9.01:95,9,0	1/1:14,0:14:36.11:488,36,0	1/1:9,0:8:6.02:71,6,0	1/1:8,0:8:8.48:119,8,0	1/1:8,2:10:6.75:105,7,0	0/0:20,0:19:48.57:0,49,1135	1/1:11,0:10:9.81:102,10,0	0/0:12,0:11:29.12:0,29,506	0/0:20,0:19:24.08:0,24,479	0/0:10,0:9:23.66:0,24,392	1/1:11,0:10:15.04:168,15,0	1/1:12,0:12:30.08:351,30,0	1/1:11,1:9:27.05:363,27,0	0/1:7,2:9:12.64:128,0,13	0/0:14,0:14:5.54:0,6,737	0/0:14,0:14:39.13:0,39,885	0/0:10,0:10:27.09:0,27,592
chr10	45174648	.	GA	G	273.64	PASS	AB=0.910;AC=6;AF=0.107;AN=56;BaseQRankSum=2.572;DP=318;FS=0.782;HRun=3;HaplotypeScore=82.9951;InbreedingCoeff=-0.0440;MQ=48.07;MQ0=9;MQRankSum=-4.025;QD=3.38;ReadPosRankSum=2.174;VQSLOD=0.2790;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:15,2:15:2.98:86,0,3	0/0:2,0:2:3.01:0,3,40	0/0:6,0:2:2.98:0,3,22	0/0:12,0:5:5.99:0,6,65	0/0:26,0:26:66.21:0,66,908	0/0:10,0:10:22.49:0,22,279	0/0:16,0:15:20.97:0,21,201	0/0:8,0:6:18.06:0,18,239	0/0:7,0:4:9.03:0,9,114	0/0:10,0:10:27.09:0,27,372	0/0:4,0:4:6.02:0,6,76	0/1:10,0:10:34.12:35,0,34	0/1:11,2:13:65.66:66,0,136	0/1:11,0:9:0.38:0,0,73	0/0:6,0:6:18.06:0,18,239	0/0:10,0:10:15.04:0,15,189	0/0:22,0:21:34.33:0,34,691	0/0:7,0:6:14.50:0,15,129	0/0:10,0:8:24.08:0,24,335	0/0:19,0:18:18.05:0,18,229	0/0:8,0:7:18.02:0,18,224	0/1:14,0:13:29.67:30,0,70	0/1:9,7:15:97.29:173,0,97	0/0:11,1:7:9.19:0,9,130	0/0:7,0:7:15.05:0,15,209	0/0:11,0:11:33.11:0,33,453	0/0:13,0:13:33.11:0,33,465	0/0:11,0:10:27.09:0,27,367
chr10	45174656	.	G	GAAA	1247.04	PASS	AB=0.917;AC=18;AF=0.333;AN=54;BaseQRankSum=-4.444;DP=280;FS=7.702;HRun=3;HaplotypeScore=84.3361;InbreedingCoeff=0.6396;MQ=44.14;MQ0=8;MQRankSum=1.650;QD=11.99;ReadPosRankSum=1.986;VQSLOD=0.2355;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:12:13.55:0,14,162	0/0:3,0:3:2.50:0,2,9	./.	0/0:6,0:2:3.01:0,3,42	1/1:5,0:23:46.34:410,46,0	0/0:7,0:7:20.81:0,21,309	0/0:17,0:16:23.66:0,24,313	1/1:3,0:2:3.44:21,3,0	0/0:9,0:5:12.04:0,12,187	0/1:8,0:10:10.29:38,0,10	0/0:2,0:2:4.99:0,5,19	0/0:10,0:10:4.57:0,5,192	0/0:12,0:11:29.45:0,29,410	0/0:11,0:9:12.04:0,12,187	0/0:4,0:5:9.17:0,9,34	0/0:5,0:6:4.08:0,4,16	0/0:23,0:22:60.51:0,61,819	0/1:5,0:4:4.16:4,0,49	1/1:2,0:7:15.24:141,15,0	1/1:0,1:16:10.55:66,11,0	1/1:3,0:5:5.52:58,6,0	0/0:12,0:11:11.96:0,12,156	0/0:15,0:14:33.56:0,34,464	0/0:12,0:7:15.50:0,16,238	0/0:5,0:7:0.85:0,1,6	1/1:3,0:11:18.07:250,18,0	1/1:2,0:11:21.47:217,21,0	1/1:1,0:8:21.04:224,21,0
chr10	45174657	.	AAGAAAG	A	4014.44	PASS	AB=0.917;AC=30;AF=0.556;AN=54;BaseQRankSum=-3.698;DP=280;FS=1.984;HRun=0;HaplotypeScore=85.5624;InbreedingCoeff=0.7196;MQ=43.54;MQ0=9;MQRankSum=-1.562;QD=26.76;ReadPosRankSum=2.779;VQSLOD=3.1768;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:13:7.57:0,8,33	1/1:1,2:3:3.01:73,3,0	./.	0/0:7,0:2:3.01:0,3,37	1/1:19,3:22:51.17:871,51,0	0/0:7,0:7:20.86:0,21,382	0/0:17,0:16:29.58:0,30,496	1/1:4,0:2:3.01:43,3,0	0/0:9,0:5:12.04:0,12,235	1/1:7,3:10:15.99:309,16,0	1/1:1,2:3:6.02:144,6,0	0/0:10,0:10:15.93:0,16,209	0/0:12,0:11:30.06:0,30,395	0/0:10,0:8:12.02:0,12,181	1/1:1,4:5:15.05:334,15,0	1/1:1,4:5:9.03:191,9,0	0/1:25,0:23:1.49:1,0,1281	0/1:4,1:4:20.51:114,0,21	1/1:8,0:7:18.05:276,18,0	1/1:16,0:15:12.04:194,12,0	1/1:6,0:5:6.02:98,6,0	0/0:12,0:11:12.03:0,12,197	0/0:15,0:14:35.10:0,35,508	0/0:13,0:7:13.68:0,14,262	1/1:5,1:6:9.50:166,10,0	1/1:9,2:11:33.07:524,33,0	1/1:11,0:11:23.29:361,23,0	1/1:10,0:9:13.52:313,14,0
chr10	45174684	.	AAG	A	196.67	PASS	AB=0.825;AC=7;AF=0.135;AN=52;BaseQRankSum=2.300;DP=311;FS=6.183;HRun=0;HaplotypeScore=84.0642;InbreedingCoeff=-0.0892;MQ=32.29;MQ0=52;MQRankSum=-2.824;QD=2.89;ReadPosRankSum=-1.671;VQSLOD=1.2054;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:12:12.49:0,12,201	0/0:4,1:4:2.04:0,2,6	./.	./.	0/0:15,0:15:37.50:0,37,478	0/0:11,0:7:18.06:0,18,278	0/0:10,0:9:15.05:0,15,194	0/0:11,0:7:21.06:0,21,293	0/0:13,0:8:9.03:0,9,126	0/1:5,2:4:32.68:81,0,33	0/1:2,1:3:4.02:39,0,4	0/0:9,0:7:15:0,15,184	0/0:15,0:11:30.09:0,30,383	0/0:13,0:10:18.06:0,18,240	0/1:6,4:6:60.73:72,0,61	0/1:4,1:5:34.82:35,0,46	0/0:31,0:19:50.95:0,51,814	0/1:9,3:8:21.70:22,0,195	0/0:10,0:10:29.22:0,29,303	0/0:17,0:13:6.02:0,6,84	0/0:8,0:3:5.44:0,5,58	0/0:6,0:4:9.03:0,9,125	0/0:8,0:7:18.06:0,18,244	0/1:22,0:13:44.43:44,0,189	0/1:8,1:8:31.12:31,0,67	0/0:13,0:11:24.77:0,25,307	0/0:9,0:9:21:0,21,257	0/0:16,0:9:15.85:0,16,248
chr10	45174708	.	AG	A	994.39	PASS	AB=0.893;AC=19;AF=0.380;AN=50;BaseQRankSum=-1.871;DP=354;FS=6.091;HRun=2;HaplotypeScore=85.4547;InbreedingCoeff=-0.3954;MQ=33.51;MQ0=57;MQRankSum=-3.014;QD=3.88;ReadPosRankSum=-0.611;VQSLOD=0.1182;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:17,9:14:20.34:333,0,20	./.	./.	./.	0/1:11,2:12:53.09:53,0,101	1/1:5,2:4:2.84:14,3,0	0/1:7,0:6:4.09:4,0,77	0/0:16,0:12:31.83:0,32,218	0/1:13,4:11:26.08:79,0,26	0/1:12,0:8:7.78:8,0,94	0/0:5,0:5:8.87:0,9,61	0/1:10,1:9:31.17:31,0,51	0/1:17,0:13:19.53:20,0,89	0/1:7,7:12:3.08:168,0,3	0/0:7,0:3:8.95:0,9,66	0/0:5,0:5:11.79:0,12,76	0/0:34,0:21:53.20:0,53,566	0/1:15,0:11:29.66:30,0,67	0/1:5,1:5:3.12:49,0,3	0/1:15,1:12:25.81:26,0,75	0/0:15,0:9:18.69:0,19,141	0/1:8,1:7:22.64:23,0,58	0/1:10,2:11:35.61:144,0,36	0/1:24,1:15:36.51:37,0,109	0/0:12,0:11:23.90:0,24,201	0/1:9,3:9:15.24:63,0,15	0/1:16,0:12:37.58:38,0,58	0/1:17,1:12:24.38:24,0,77
chr10	45174711	.	A	AAG	613.99	PASS	AB=0.967;AC=12;AF=0.240;AN=50;BaseQRankSum=-1.048;DP=365;FS=20.856;HRun=0;HaplotypeScore=95.7203;InbreedingCoeff=-0.1688;MQ=34.34;MQ0=58;MQRankSum=-4.525;QD=3.72;ReadPosRankSum=2.704;VQSLOD=0.9270;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:14:99:229,0,110	./.	./.	./.	0/0:12,0:11:25.50:0,25,340	1/1:5,3:5:3.01:57,3,0	0/1:7,0:6:19.40:19,0,128	0/0:15,0:11:9.15:0,9,217	0/1:17,0:11:5.06:5,0,130	0/0:12,0:8:20.90:0,21,267	0/0:5,0:5:9.02:0,9,108	0/1:10,1:9:75.20:75,0,200	0/1:12,6:14:99:193,0,297	0/1:15,0:13:75.62:76,0,101	0/0:7,0:3:9.03:0,9,125	0/0:5,0:5:12.04:0,12,170	0/0:34,0:21:54.18:0,54,794	0/1:19,0:15:24.75:25,0,168	0/1:6,0:5:3.91:4,0,58	0/0:15,0:11:17.89:0,18,198	0/0:16,0:10:29.24:0,29,335	0/1:10,0:8:27.59:28,0,167	0/0:14,0:13:1.62:0,2,184	0/1:26,0:15:41.79:42,0,180	0/0:14,0:13:29.92:0,30,373	0/0:11,0:8:16.97:0,17,131	0/0:16,0:12:23.35:0,23,254	0/0:19,0:12:22.09:0,22,220
chr10	45174718	.	GA	G	797.42	PASS	AB=0.877;AC=10;AF=0.192;AN=52;BaseQRankSum=-0.505;DP=380;FS=13.517;HRun=3;HaplotypeScore=94.4889;InbreedingCoeff=-0.0208;MQ=36.61;MQ0=61;MQRankSum=-2.236;QD=4.83;ReadPosRankSum=2.906;VQSLOD=-0.5442;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:25,2:14:77.79:78,0,159	0/0:5,0:4:3.01:0,3,43	./.	./.	0/1:12,0:11:1.51:2,0,34	0/0:12,0:8:12.02:0,12,137	0/0:10,0:8:21.02:0,21,255	0/0:9,0:6:18.06:0,18,243	0/0:19,0:13:24.94:0,25,301	0/0:14,0:10:27.06:0,27,301	0/0:6,0:6:10.26:0,10,103	0/0:11,0:9:21.06:0,21,275	0/0:18,0:14:39.13:0,39,540	0/0:14,0:12:16.53:0,17,208	0/0:7,0:3:9.03:0,9,125	0/0:7,0:7:18.86:0,19,173	0/0:34,0:21:50.95:0,51,568	0/1:22,0:18:58.29:58,0,186	0/0:6,0:5:0.39:0,0,15	0/1:9,5:10:57.82:92,0,58	0/1:9,8:11:21.71:199,0,22	0/0:14,0:11:22.29:0,22,256	0/0:15,0:14:36.11:0,36,483	0/1:27,0:16:41.39:41,0,174	0/0:14,0:13:30.08:0,30,354	0/1:12,0:8:17.40:17,0,89	1/1:0,16:12:24.07:285,24,0	0/1:9,9:11:25.19:165,0,25
chr10	45174775	.	GGAGA	G	2295.47	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-1.325;DP=514;FS=0.000;HRun=0;HaplotypeScore=137.8093;InbreedingCoeff=0.9751;MQ=51.09;MQ0=21;MQRankSum=-0.748;QD=18.22;ReadPosRankSum=0.862;VQSLOD=3.0882;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:27:74.15:0,74,1450	1/1:5,0:5:5.42:36,5,0	0/0:9,0:6:15.05:0,15,410	0/0:9,0:7:18.06:0,18,435	0/0:13,0:13:35.88:0,36,571	0/0:13,0:13:27.09:0,27,650	0/0:17,0:15:42.08:0,42,947	1/1:3,12:12:35.42:253,35,0	0/0:22,0:20:51.11:0,51,1190	1/1:24,0:24:68.69:600,69,0	1/1:14,0:14:32.88:271,33,0	0/0:19,0:18:48.10:0,48,992	0/0:24,0:22:60.06:0,60,1130	0/0:21,0:20:53.97:0,54,1138	1/1:18,0:18:50.83:436,51,0	1/1:18,0:18:53.76:441,54,0	0/0:29,0:25:69.19:0,69,1600	1/1:17,0:17:32.08:238,32,0	0/0:17,0:16:45.06:0,45,800	0/0:12,0:10:24.03:0,24,482	0/0:23,0:22:57.13:0,57,1410	0/0:18,0:16:39.03:0,39,850	0/0:15,0:15:45.07:0,45,1037	0/0:26,0:21:56.97:0,57,1226	1/1:15,0:15:21.95:224,22,0	0/0:18,0:15:45.08:0,45,992	0/0:25,0:21:45.13:0,45,1020	0/0:24,0:22:54.07:0,54,1228
chr10	45174957	.	TACACACAC	T	3201.11	PASS	AB=0.876;AC=27;AF=0.482;AN=56;BaseQRankSum=3.958;DP=644;FS=19.411;HRun=0;HaplotypeScore=157.9060;InbreedingCoeff=0.2004;MQ=54.01;MQ0=46;MQRankSum=-5.033;QD=8.87;ReadPosRankSum=-2.161;VQSLOD=1.0155;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:29:33.05:0,33,600	0/0:0,0:2:2.99:0,3,24	0/0:65,0:10:2.04:0,2,6	0/0:68,0:13:0.47:0,0,1	1/1:10,3:14:5.45:34,5,0	0/0:16,0:19:27.03:0,27,584	0/0:14,0:20:14.84:0,15,380	0/0:21,0:20:8.93:0,9,65	1/1:8,10:18:15.05:376,15,0	0/1:13,0:13:23.21:23,0,129	1/1:9,0:8:0.47:2,0,0	0/1:13,11:27:9.88:102,0,10	1/1:11,17:29:5.85:704,6,0	1/1:10,14:24:9.50:226,10,0	0/1:30,0:30:74.55:126,0,75	0/1:19,0:19:33.11:137,0,33	0/0:12,0:24:14.37:0,14,295	0/1:12,0:12:82.62:83,0,85	0/1:13,0:13:13.17:18,0,13	0/0:7,12:19:2.01:0,2,19	0/1:37,0:38:19.70:163,0,20	1/1:5,7:13:0.41:1,0,0	1/1:6,12:19:6.47:101,6,0	0/1:18,11:29:0:1,0,0	0/0:12,0:13:9.02:0,9,115	1/1:6,15:21:22.21:637,22,0	1/1:9,8:17:22.52:418,23,0	0/1:4,8:12:7.94:214,0,8
chr10	45174991	.	CACACACACAT	C	1888.05	PASS	AB=0.990;AC=21;AF=0.375;AN=56;BaseQRankSum=10.644;DP=692;FS=0.000;HRun=0;HaplotypeScore=199.7766;InbreedingCoeff=0.0767;MQ=46.71;MQ0=43;MQRankSum=-5.730;QD=4.83;ReadPosRankSum=4.735;VQSLOD=2.1951;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:36:61.44:0,61,1094	0/0:6,0:5:6.02:0,6,136	0/0:35,0:10:27.45:0,27,239	0/0:40,0:4:8.92:0,9,65	0/0:19,0:18:17.89:0,18,160	0/0:23,0:24:38.84:0,39,836	0/0:26,0:26:41.53:0,42,843	1/1:31,0:22:11.95:222,12,0	0/1:22,0:21:62.22:62,0,114	1/1:20,0:20:32.88:359,33,0	1/1:2,9:10:0.89:2,1,0	0/1:21,0:21:99:121,0,167	0/1:29,0:29:99:125,0,102	0/1:29,0:28:35.87:36,0,169	1/1:7,28:35:12.23:280,12,0	1/1:4,18:20:6.39:296,6,0	0/0:27,0:26:25.75:0,26,478	0/1:14,2:13:11.88:228,0,12	0/0:15,0:13:29.79:0,30,223	0/0:26,0:26:34.93:0,35,290	0/1:36,0:34:13.23:13,0,289	0/0:20,0:18:13.30:0,13,177	0/1:32,0:29:23.17:23,0,165	0/0:25,0:25:14.08:0,14,163	0/1:18,0:17:39.52:105,0,40	0/1:36,0:34:99:101,0,487	0/1:17,0:17:58.07:58,0,166	0/1:16,0:16:32.21:32,0,78
chr10	45174993	.	CACACACATACACACAT	C	519.76	PASS	AB=0.823;AC=4;AF=0.071;AN=56;BaseQRankSum=6.425;DP=692;FS=2.996;HRun=0;HaplotypeScore=252.5256;InbreedingCoeff=0.1619;MQ=47.19;MQ0=41;MQRankSum=0.654;QD=6.75;ReadPosRankSum=-5.146;VQSLOD=1.7676;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:36:52.57:0,53,2046	0/0:6,0:5:6.02:0,6,284	0/0:33,0:9:27.09:0,27,510	0/0:37,0:5:15.05:0,15,239	0/0:19,0:18:22.46:0,22,492	0/0:26,0:26:48.61:0,49,1542	0/0:25,0:25:50.76:0,51,1659	0/1:14,17:22:37.80:566,0,38	0/0:22,0:21:19.14:0,19,722	0/0:20,0:20:7.01:0,7,280	1/1:11,0:10:0.89:2,1,0	0/0:21,0:22:24.02:0,24,672	0/0:31,0:31:59.53:0,60,1173	0/0:30,0:29:38.84:0,39,1045	0/1:35,0:35:38.95:42,0,39	0/0:22,0:20:13.79:0,14,141	0/0:27,0:26:35.46:0,35,741	0/0:17,0:14:14.18:0,14,82	0/0:14,0:12:26.99:0,27,450	0/0:27,0:27:38.14:0,38,896	0/0:36,0:34:56.30:0,56,1198	0/0:20,0:18:14.62:0,15,555	0/0:32,0:29:25.48:0,25,482	0/0:24,0:25:14.32:0,14,441	0/0:18,0:17:15.03:0,15,240	0/0:36,0:34:93.53:0,94,1991	0/0:18,0:18:39.13:0,39,886	0/0:14,0:14:23.97:0,24,477
chr10	45174999	.	CAT	C	953.81	PASS	AB=1.000;AC=12;AF=0.214;AN=56;BaseQRankSum=4.588;DP=673;FS=16.592;HRun=0;HaplotypeScore=146.7508;InbreedingCoeff=0.2722;MQ=48.42;MQ0=20;MQRankSum=-0.499;QD=4.22;ReadPosRankSum=-1.328;VQSLOD=1.9658;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:37,0:35:71.39:71,0,208	0/0:7,0:6:7.94:0,8,45	0/0:29,0:15:41.95:0,42,361	0/0:23,0:6:17.88:0,18,149	0/1:18,0:17:2.87:3,0,123	0/1:27,0:27:40.48:40,0,322	0/0:26,0:26:33.82:0,34,422	0/1:28,0:20:8.41:218,0,8	0/0:23,0:22:23.93:0,24,180	1/1:2,13:15:26.68:265,27,0	0/1:11,0:10:0:0,0,0	0/0:27,0:27:35.29:0,35,267	0/0:31,0:31:40.64:0,41,245	0/0:31,0:30:20.73:0,21,249	0/1:30,0:30:40.90:44,0,41	0/1:21,0:19:9.11:65,0,9	0/0:29,0:28:20.80:0,21,251	1/1:19,0:16:37.89:232,38,0	0/0:13,0:11:15.13:0,15,174	0/0:27,0:27:41.24:0,41,338	0/0:34,0:32:59.37:0,59,476	0/0:21,0:19:22.79:0,23,175	0/0:33,0:30:22.13:0,22,215	0/0:25,0:25:14.26:0,14,108	0/1:20,0:19:11.38:170,0,11	0/0:36,0:34:66.93:0,67,604	0/0:18,0:18:31.21:0,31,251	0/0:14,0:14:18.71:0,19,110
chr10	45176139	.	A	ACT	104.83	PASS	AC=6;AF=0.130;AN=46;BaseQRankSum=4.812;DP=432;FS=25.379;HRun=0;HaplotypeScore=67.4238;InbreedingCoeff=0.6034;MQ=61.77;MQ0=7;MQRankSum=-3.530;QD=14.98;ReadPosRankSum=-2.064;VQSLOD=1.4119;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:56,1:56:64.60:0,65,1535	0/0:5,0:4:3.01:0,3,30	0/0:19,0:17:31.26:0,31,647	0/0:22,0:18:28.90:0,29,673	0/0:20,0:20:33.11:0,33,484	0/0:18,0:17:36.12:0,36,529	0/0:28,0:28:78.25:0,78,1112	0/0:20,0:15:44.94:0,45,372	1/1:1,2:2:6.02:112,6,0	0/0:10,0:8:20.97:0,21,174	0/0:15,0:12:6.01:0,6,58	1/1:0,1:1:3.01:56,3,0	./.	1/1:2,1:1:3.01:45,3,0	0/0:13,1:11:3.01:0,3,31	./.	0/0:34,2:36:37.41:0,37,1267	0/0:13,1:13:9.01:0,9,98	0/0:24,0:24:66.21:0,66,954	0/0:12,0:12:33.11:0,33,485	0/0:43,0:43:99:0,108,1589	./.	./.	./.	0/0:11,0:6:3:0,3,28	0/0:20,0:20:60.20:0,60,883	0/0:16,0:15:27.09:0,27,396	0/0:9,0:8:18.06:0,18,260
chr10	45176183	.	C	CTG	310.32	PASS	AB=0.903;AC=10;AF=0.238;AN=42;BaseQRankSum=5.377;DP=370;FS=36.402;HRun=0;HaplotypeScore=53.4555;InbreedingCoeff=0.2230;MQ=42.02;MQ0=68;MQRankSum=-4.960;QD=2.37;ReadPosRankSum=2.323;VQSLOD=0.2809;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:51,3:36:55.93:56,0,719	0/0:2,0:1:2.97:0,3,20	./.	0/0:12,0:3:3.48:0,3,50	0/0:14,0:9:15:0,15,214	0/0:18,0:13:12.04:0,12,195	0/0:32,2:20:45.11:0,45,702	./.	1/1:4,3:3:6.02:110,6,0	0/0:4,0:3:6.02:0,6,97	0/0:5,0:4:6.02:0,6,83	1/1:1,2:2:6.02:111,6,0	./.	1/1:3,1:1:3.01:55,3,0	0/1:7,2:6:42.83:49,0,43	./.	0/1:44,2:42:13.16:13,0,1321	0/1:7,1:7:45.13:45,0,77	0/0:21,0:10:30.10:0,30,489	0/0:13,0:7:15.05:0,15,241	0/0:48,0:40:72.23:0,72,1130	./.	./.	./.	0/0:6,0:1:3.01:0,3,49	0/0:19,0:15:45.15:0,45,733	0/0:13,0:13:21.07:0,21,341	0/0:6,0:6:15.05:0,15,244
chr10	45176224	.	C	CTG	247.98	PASS	AB=0.920;AC=12;AF=0.353;AN=34;BaseQRankSum=4.379;DP=364;FS=0.000;HRun=0;HaplotypeScore=44.1714;InbreedingCoeff=0.2634;MQ=51.55;MQ0=87;MQRankSum=-0.811;QD=3.70;ReadPosRankSum=-3.736;VQSLOD=0.5736;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:44,3:27:30.05:0,30,428	./.	0/1:15,0:11:17.79:18,0,304	0/1:12,0:4:0.08:0,0,33	0/1:14,1:4:30.77:31,0,42	0/0:18,0:11:9.03:0,9,146	0/0:34,0:13:11.98:0,12,164	./.	1/1:4,3:3:6.02:109,6,0	./.	./.	1/1:1,2:2:3.01:54,3,0	./.	1/1:0,1:1:3.01:53,3,0	1/1:2,2:3:3.01:55,3,0	./.	0/0:51,2:48:4.17:0,4,1597	0/1:6,2:5:42.82:48,0,43	0/0:10,0:5:15.03:0,15,195	./.	0/0:51,0:36:26.97:0,27,355	./.	./.	./.	./.	0/0:22,0:11:30.10:0,30,485	0/0:18,0:15:21.48:0,21,312	0/0:1,0:1:3.01:0,3,49
chr10	45176822	.	CTTTG	C	119.19	PASS	AC=6;AF=0.200;AN=30;BaseQRankSum=1.264;DP=687;FS=17.438;HRun=0;HaplotypeScore=53.8185;InbreedingCoeff=0.7136;MQ=20.70;MQ0=419;MQRankSum=-2.731;QD=2.34;ReadPosRankSum=-1.769;VQSLOD=-0.1167;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:17:33.07:0,33,811	./.	./.	./.	0/0:66,0:19:42.14:0,42,1100	0/0:22,0:15:33.11:0,33,785	0/0:40,0:6:9.03:0,9,237	./.	./.	1/1:36,4:2:6.02:110,6,0	./.	./.	./.	./.	1/1:4,2:1:3.01:55,3,0	1/1:3,2:1:3.01:55,3,0	0/0:47,0:26:54.19:0,54,1424	0/0:18,1:5:6.02:0,6,159	0/0:32,0:8:21.07:0,21,555	0/0:40,0:27:69.12:0,69,1642	0/0:23,0:18:36.12:0,36,916	./.	./.	./.	./.	0/0:49,0:22:60.21:0,60,1583	0/0:26,0:18:42.14:0,42,1061	0/0:24,0:8:9.03:0,9,237
chr10	45177182	.	GC	G	1043.63	PASS	AB=0.802;AC=11;AF=0.393;AN=28;BaseQRankSum=0.613;DP=661;FS=6.089;HRun=2;HaplotypeScore=43.9319;InbreedingCoeff=0.5443;MQ=23.18;MQ0=278;MQRankSum=-0.757;QD=4.83;ReadPosRankSum=-1.363;VQSLOD=0.0345;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:45,0:28:0:0,0,0	./.	./.	./.	./.	0/0:24,0:17:2.53:0,3,44	0/0:31,0:17:15.05:0,15,223	1/1:17,29:17:36.12:466,36,0	./.	1/1:11,15:12:33.06:396,33,0	./.	./.	./.	./.	1/1:5,18:15:3.01:39,3,0	0/1:4,15:13:0:0,0,0	0/0:46,2:33:3.01:0,3,45	1/1:6,29:28:14.88:193,15,0	0/1:18,4:4:65.82:66,0,78	0/0:23,0:13:6.02:0,6,90	0/0:78,2:39:14.64:0,15,224	./.	./.	./.	./.	0/0:28,1:12:33.11:0,33,494	0/0:30,0:12:9.03:0,9,133	./.
chr10	45177923	.	ATTTC	A	877.75	PASS	AB=0.907;AC=12;AF=0.240;AN=50;BaseQRankSum=5.011;DP=561;FS=45.282;HRun=0;HaplotypeScore=120.5693;InbreedingCoeff=0.4966;MQ=81.43;MQ0=0;MQRankSum=-6.004;QD=8.20;ReadPosRankSum=1.442;VQSLOD=1.2039;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,2:41:99:0,111,3211	0/0:8,0:8:24.08:0,24,662	0/0:27,0:27:38.58:0,39,1695	0/1:19,0:20:5.99:6,0,926	0/0:28,0:28:72.72:0,73,1927	0/1:29,2:31:41.41:41,0,2073	0/0:28,2:29:81.28:0,81,2344	0/0:35,0:35:99:0,105,3004	1/1:0,3:3:9.03:189,9,0	0/0:28,1:29:84.28:0,84,2336	0/0:23,2:24:60.17:0,60,1619	1/1:0,2:2:6.02:126,6,0	1/1:0,2:2:6.02:102,6,0	1/1:0,4:4:12.04:251,12,0	0/1:21,2:22:65.46:65,0,1442	0/1:17,5:22:99:251,0,1335	0/0:41,0:41:99:0,111,3203	0/0:24,0:23:63.22:0,63,1833	0/0:21,0:21:63.22:0,63,1795	0/0:22,1:22:60.21:0,60,1702	0/0:25,0:25:66.23:0,66,1912	./.	./.	./.	0/0:32,0:32:90.31:0,90,2540	0/0:24,0:24:72.23:0,72,2037	0/0:32,1:33:33.48:0,33,2454	0/0:6,0:6:18.06:0,18,521
chr10	45179349	.	A	AGGTGC	1472.17	PASS	AB=0.769;AC=8;AF=0.222;AN=36;BaseQRankSum=-4.937;DP=846;FS=30.321;HRun=0;HaplotypeScore=15.6751;InbreedingCoeff=0.0005;MQ=13.57;MQ0=489;MQRankSum=0.273;QD=9.81;ReadPosRankSum=1.794;VQSLOD=0.5291;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:67,0:16:9.03:0,9,209	1/1:6,2:1:3.01:100,3,0	./.	./.	./.	0/0:35,0:9:15.05:0,15,349	0/0:50,0:6:3.01:0,3,70	./.	0/0:15,0:1:3.01:0,3,70	0/1:20,3:4:60.87:139,0,61	./.	0/0:36,0:5:3.01:0,3,70	0/0:35,0:4:3.01:0,3,70	./.	0/1:18,15:7:51.77:479,0,52	1/1:20,8:3:3.01:100,3,0	0/0:59,0:5:3.01:0,3,70	0/1:29,12:13:99:574,0,116	0/0:28,0:2:6.02:0,6,139	./.	./.	0/0:14,0:3:9.03:0,9,210	0/0:11,0:2:3.01:0,3,70	./.	0/1:10,3:5:60.84:190,0,61	0/0:53,0:10:27.09:0,27,629	0/0:40,0:13:24.08:0,24,544	./.
chr10	45181234	.	TA	T	2120.93	PASS	AB=0.906;AC=17;AF=0.405;AN=42;BaseQRankSum=9.090;DP=441;FS=3.930;HRun=2;HaplotypeScore=55.4042;InbreedingCoeff=0.8317;MQ=53.13;MQ0=9;MQRankSum=-7.138;QD=14.94;ReadPosRankSum=-1.388;VQSLOD=2.8454;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,120,1744	1/1:0,7:4:12.04:156,12,0	0/0:13,0:6:6.02:0,6,81	0/0:10,0:6:12.04:0,12,155	0/0:33,0:32:24.50:0,24,792	0/0:17,0:17:42.14:0,42,627	0/0:28,0:28:84.17:0,84,1189	1/1:1,3:2:3.01:39,3,0	./.	1/1:0,16:13:39.13:506,39,0	1/1:0,12:6:18.06:229,18,0	./.	./.	./.	1/1:0,28:25:39.13:505,39,0	1/1:0,21:19:21.07:272,21,0	0/0:32,1:33:42.41:0,42,1104	1/1:0,7:7:18.06:233,18,0	0/0:21,0:21:63.21:0,63,943	0/0:28,0:27:75.19:0,75,1075	0/0:34,0:34:93.30:0,93,1373	./.	./.	./.	1/1:0,18:10:27.05:331,27,0	0/1:26,3:26:26.19:26,0,919	0/0:28,0:27:66.22:0,66,988	0/0:10,0:8:24.08:0,24,359
chr10	45181478	.	GA	G	725.91	PASS	AB=0.633;AC=14;AF=0.333;AN=42;BaseQRankSum=0.486;DP=503;FS=19.400;HRun=10;HaplotypeScore=30.2505;InbreedingCoeff=0.4907;MQ=24.74;MQ0=109;MQRankSum=-0.097;QD=5.08;ReadPosRankSum=-0.905;VQSLOD=-0.1816;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:36:3.01:0,3,31	1/1:1,6:2:2.97:20,3,0	./.	./.	1/1:4,19:18:17.82:155,18,0	0/0:24,0:15:18.05:0,18,199	0/0:29,0:13:9.02:0,9,97	./.	0/0:19,0:12:6.02:0,6,66	0/1:5,12:8:18.18:89,0,18	./.	0/0:5,0:4:3.01:0,3,33	0/0:15,0:11:8.89:0,9,99	0/0:25,0:23:36.10:0,36,398	0/0:6,5:6:0:0,0,0	0/0:4,5:5:0:0,0,0	0/0:29,0:22:9.02:0,9,99	./.	0/1:9,8:3:17.03:17,0,57	1/1:2,24:13:17.99:156,18,0	./.	0/0:12,0:10:6.02:0,6,66	0/0:10,0:9:11.99:0,12,119	0/0:11,0:9:3.01:0,3,33	./.	1/1:8,15:12:20.12:180,20,0	1/1:2,19:15:26.95:227,27,0	1/1:3,6:4:3:26,3,0
chr10	45182602	.	GA	G	1932.01	PASS	AB=0.965;AC=41;AF=0.820;AN=50;BaseQRankSum=2.849;DP=285;FS=3.020;HRun=1;HaplotypeScore=65.1618;InbreedingCoeff=-0.0069;MQ=76.85;MQ0=1;MQRankSum=-2.167;QD=6.90;ReadPosRankSum=5.137;VQSLOD=0.9921;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:19:32.47:182,32,0	./.	0/1:12,0:10:30.74:49,0,31	0/1:17,3:15:12.02:34,0,12	1/1:11,0:11:5.50:79,5,0	1/1:14,0:14:31.30:134,31,0	1/1:20,0:20:24.71:158,25,0	1/1:8,0:8:16.40:102,16,0	1/1:13,0:13:30.23:112,30,0	1/1:3,0:3:3:27,3,0	1/1:1,0:1:1.82:5,2,0	1/1:12,0:12:30.96:147,31,0	0/1:9,0:9:26.99:48,0,27	0/1:9,0:9:3.51:58,0,4	./.	0/0:3,0:2:3.11:0,3,9	0/1:18,0:18:2.77:101,0,3	1/1:3,0:3:7.94:39,8,0	0/1:6,0:6:0.07:24,0,0	0/1:7,1:8:27.55:44,0,28	1/1:30,0:30:47.65:239,48,0	1/1:6,0:6:13.04:56,13,0	1/1:10,1:11:6.06:73,6,0	1/1:15,0:15:11.41:92,11,0	./.	1/1:11,0:11:16.59:55,17,0	1/1:11,0:11:27.55:101,28,0	1/1:10,0:10:21.57:97,22,0
chr10	45182869	.	GA	G	1948.95	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-0.608;DP=428;FS=19.752;HRun=8;HaplotypeScore=73.5031;InbreedingCoeff=0.8773;MQ=59.70;MQ0=13;MQRankSum=-5.871;QD=19.11;ReadPosRankSum=-1.856;VQSLOD=1.9448;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:78.22:0,78,927	1/1:1,1:2:3:29,3,0	0/0:29,0:7:11.06:0,11,94	0/0:19,0:8:2.55:0,3,30	0/0:24,0:24:60.13:0,60,697	0/0:15,0:15:33.07:0,33,382	0/0:14,0:13:24.03:0,24,268	1/1:3,20:22:60.08:573,60,0	0/0:13,0:12:24.07:0,24,290	1/1:5,9:13:18.59:296,19,0	1/1:6,6:11:3.21:180,3,0	0/0:9,0:9:12.04:0,12,144	0/0:5,0:5:9.02:0,9,97	0/0:8,0:8:18.04:0,18,204	1/1:8,6:14:27.04:259,27,0	1/1:4,6:10:27.04:260,27,0	0/0:28,0:27:75.20:0,75,883	1/1:7,13:18:42.07:405,42,0	0/0:16,0:14:36.07:0,36,417	0/0:15,0:15:33.06:0,33,382	0/0:10,0:9:24.07:0,24,289	0/0:8,0:8:21.06:0,21,253	0/0:17,0:17:36.10:0,36,425	0/0:8,0:7:12.04:0,12,144	1/1:2,5:7:15.01:140,15,0	0/0:26,0:26:69.18:0,69,802	0/0:12,0:12:30.05:0,30,345	0/0:14,0:14:39.12:0,39,469
chr10	45182890	.	AC	A	4949.90	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=0.685;DP=444;FS=0.591;HRun=9;HaplotypeScore=74.6342;InbreedingCoeff=0.8142;MQ=65.84;MQ0=10;MQRankSum=-3.449;QD=16.18;ReadPosRankSum=2.339;VQSLOD=5.1055;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,26:32:63.03:576,63,0	1/1:0,1:1:3:27,3,0	0/0:59,0:14:10.03:0,10,110	0/0:36,1:13:8.58:0,9,145	1/1:4,0:21:35.81:109,36,0	1/1:0,16:16:39.02:357,39,0	1/1:0,12:12:21.01:192,21,0	0/0:21,0:21:2.19:0,2,109	1/1:1,13:14:33:297,33,0	1/1:1,13:14:39.02:357,39,0	1/1:3,9:12:35.95:312,36,0	1/1:1,5:6:9:82,9,0	1/1:0,5:5:12.01:110,12,0	1/1:1,7:8:15.01:137,15,0	1/1:1,6:7:21:187,21,0	1/1:0,11:11:33.02:302,33,0	0/0:21,0:21:51.14:0,51,579	1/1:6,15:21:50.96:450,51,0	1/1:2,0:11:18.28:54,18,0	1/1:4,0:14:23.52:73,24,0	1/1:1,0:6:11.02:39,11,0	1/1:0,9:9:26.91:230,27,0	1/1:3,12:15:39.02:356,39,0	1/1:1,10:10:15.01:137,15,0	1/1:0,10:10:27.01:247,27,0	1/1:3,0:29:57.56:197,58,0	1/1:0,0:9:19.14:62,19,0	1/1:2,0:12:20.34:60,20,0
chr10	45182977	.	AG	A	5766.86	PASS	AB=0.568;AC=13;AF=0.232;AN=56;BaseQRankSum=4.233;DP=539;FS=6.622;HRun=1;HaplotypeScore=67.7292;InbreedingCoeff=0.8989;MQ=89.09;MQ0=0;MQRankSum=-3.811;QD=39.23;ReadPosRankSum=2.178;VQSLOD=5.5503;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,102,1605	0/0:8,0:8:23.95:0,24,351	0/0:18,0:18:51.16:0,51,788	0/0:24,0:24:68.85:0,69,913	1/1:1,15:16:42.08:548,42,0	0/0:24,0:24:63.20:0,63,971	0/0:11,0:11:33.06:0,33,476	0/0:33,0:33:99:0,99,1534	0/0:12,0:12:33.11:0,33,527	0/0:20,0:20:60.20:0,60,959	0/0:21,0:21:63.12:0,63,950	0/0:17,0:17:48.15:0,48,742	0/0:7,0:7:21.07:0,21,335	0/0:14,0:14:42.14:0,42,671	0/0:18,0:18:51:0,51,815	0/0:15,0:15:45.15:0,45,719	0/0:25,0:25:72.25:0,72,1150	0/0:25,0:25:72.25:0,72,1149	1/1:0,18:18:54.18:755,54,0	1/1:0,25:25:75.25:1049,75,0	1/1:0,14:14:39.13:545,39,0	0/0:11,0:11:33.10:0,33,504	0/0:17,0:17:51.14:0,51,768	0/0:15,0:15:33.11:0,33,527	0/0:21,0:21:60.20:0,60,959	0/1:6,19:25:23.73:815,0,24	1/1:0,26:26:78.26:1091,78,0	1/1:0,23:23:69.23:964,69,0
chr10	45183854	.	C	CA	1199.02	PASS	AB=0.878;AC=35;AF=0.625;AN=56;BaseQRankSum=4.398;DP=532;FS=0.526;HRun=18;HaplotypeScore=88.0006;InbreedingCoeff=0.1890;MQ=58.92;MQ0=18;MQRankSum=-2.891;QD=2.72;ReadPosRankSum=0.286;VQSLOD=-0.6404;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,1:31:8.47:81,8,0	1/1:7,0:7:7.24:31,7,0	0/0:24,0:8:0.19:0,0,11	0/0:12,0:5:8.28:0,8,31	0/1:33,0:35:32.62:33,0,47	0/1:13,0:16:2.36:2,0,50	0/1:10,0:11:13.39:13,0,18	1/1:31,0:29:31.99:148,32,0	1/1:26,0:26:19:144,19,0	1/1:18,0:18:33.45:153,33,0	1/1:20,0:20:23.18:110,23,0	1/1:12,0:12:0.21:16,0,0	1/1:13,0:12:4.72:41,5,0	0/1:9,14:23:5.39:34,0,5	1/1:12,0:12:11.14:52,11,0	1/1:10,0:10:11.14:51,11,0	0/1:36,0:37:7.29:7,0,48	1/1:19,0:19:30.62:135,31,0	0/0:20,1:22:10.84:0,11,98	0/1:23,0:25:19.48:19,0,61	0/0:7,0:6:9.87:0,10,43	0/1:7,8:15:13.69:14,0,20	0/1:8,13:22:13.41:67,0,13	1/1:17,0:16:1.21:72,1,0	1/1:16,0:16:22.13:98,22,0	0/1:22,0:22:13.33:49,0,13	0/0:15,0:15:2.68:0,3,36	0/0:9,0:11:23.29:0,23,91
chr10	45183864	.	A	AAAAG	4435.58	PASS	AB=0.773;AC=16;AF=0.286;AN=56;BaseQRankSum=-7.137;DP=564;FS=19.207;HRun=0;HaplotypeScore=104.9686;InbreedingCoeff=0.8245;MQ=61.77;MQ0=3;MQRankSum=-2.084;QD=23.85;ReadPosRankSum=2.978;VQSLOD=3.2768;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:31,0:30:6.53:7,0,90	1/1:6,0:8:7.11:219,7,0	0/0:21,0:11:20.40:0,20,174	0/0:9,0:5:9.58:0,10,82	0/0:33,0:33:75.07:0,75,702	0/0:15,0:15:41.87:0,42,451	0/0:13,0:13:31.52:0,32,315	1/1:9,27:43:58.86:1105,59,0	0/0:25,0:25:44.77:0,45,397	1/1:1,17:21:53.90:912,54,0	1/1:2,13:21:30.78:647,31,0	0/0:12,0:12:30.27:0,30,245	0/0:10,0:10:18.53:0,19,124	0/0:20,0:20:20.94:0,21,192	0/1:2,8:12:4.96:231,0,5	1/1:3,7:12:10.98:227,11,0	0/0:36,0:36:82.58:0,83,800	1/1:3,16:19:13.82:646,14,0	0/0:23,0:23:61.03:0,61,677	0/0:31,0:31:85.19:0,85,848	0/0:8,0:7:20.06:0,20,219	0/0:17,0:17:47.13:0,47,385	0/0:22,0:22:41.96:0,42,364	0/0:18,0:17:31.38:0,31,246	1/1:0,13:17:24.08:443,24,0	0/0:34,0:33:52.14:0,52,617	0/0:20,0:20:47.98:0,48,491	0/0:11,0:11:32.88:0,33,423
chr10	45184334	.	A	AGAG	24418.61	PASS	AB=0.784;AC=44;AF=0.786;AN=56;BaseQRankSum=-7.367;DP=846;FS=24.230;HRun=0;HaplotypeScore=157.8162;InbreedingCoeff=0.3618;MQ=59.74;MQ0=7;MQRankSum=-0.635;QD=32.30;ReadPosRankSum=7.829;VQSLOD=3.2753;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:14,49:63:99:2276,111,0	1/1:5,6:11:30.03:499,30,0	0/0:22,0:17:33.11:0,33,484	0/0:24,0:18:28.32:0,28,389	1/1:3,26:29:69.19:1344,69,0	1/1:6,21:27:27.09:568,27,0	1/1:7,23:31:39.13:801,39,0	0/1:37,0:37:99:190,0,107	1/1:8,25:32:41.40:1173,41,0	0/1:24,0:39:20.58:676,0,21	0/1:15,0:24:29.17:322,0,29	1/1:5,31:37:63.16:1266,63,0	1/1:5,31:37:78.27:1639,78,0	1/1:7,27:35:60.21:1230,60,0	0/1:17,0:26:40.65:427,0,41	1/1:14,1:30:54.50:836,54,0	0/0:44,0:44:84.72:0,85,1467	0/1:12,0:15:55.05:107,0,55	1/1:3,17:20:51.12:878,51,0	1/1:5,25:30:69.17:1334,69,0	1/1:7,46:52:99:2209,105,0	1/1:1,22:24:57.14:1129,57,0	1/1:1,31:32:63.54:1295,64,0	1/1:7,32:39:75.26:1570,75,0	0/1:10,0:19:59.86:289,0,60	1/1:9,21:30:63.19:1224,63,0	1/1:2,24:27:39.13:821,39,0	1/1:0,7:7:15.05:316,15,0
chr10	45184366	.	TG	T	6816.41	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=7.404;DP=819;FS=1.007;HRun=1;HaplotypeScore=165.0741;InbreedingCoeff=0.9585;MQ=79.77;MQ0=2;MQRankSum=-6.118;QD=38.95;ReadPosRankSum=0.354;VQSLOD=4.3842;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:60,0:60:99:0,160,2508	1/1:0,11:11:33.11:461,33,0	0/0:33,0:34:97.33:0,97,1573	0/0:32,0:30:75.39:0,75,1222	0/0:26,0:26:75.25:0,75,1182	0/0:24,0:24:48.16:0,48,759	0/0:24,0:24:57.19:0,57,905	1/1:0,30:30:90.29:1242,90,0	0/0:32,0:32:81.28:0,81,1292	1/1:0,32:32:93.31:1295,93,0	1/1:0,16:16:45.15:614,45,0	0/0:35,0:35:81.28:0,81,1291	0/0:37,0:37:99:0,105,1674	0/0:34,0:34:84.27:0,84,1314	1/1:0,32:32:84.28:1155,84,0	1/1:1,27:28:30.29:980,30,0	0/0:36,0:36:99:0,108,1721	1/1:0,12:12:36.12:503,36,0	0/0:25,0:25:72.23:0,72,1129	0/0:30,0:30:84.27:0,84,1315	0/0:52,0:52:99:0,148,2332	0/0:31,0:31:87.27:0,87,1341	0/0:24,0:24:53.95:0,54,898	0/0:40,0:40:99:0,108,1668	1/1:0,14:14:42.14:566,42,0	0/0:26,2:28:0.33:0,0,1137	0/0:26,0:26:56.79:0,57,908	0/0:14,0:14:39.10:0,39,576
chr10	45185015	.	CA	C	4681.17	PASS	AB=0.933;AC=17;AF=0.304;AN=56;BaseQRankSum=16.175;DP=647;FS=1.502;HRun=8;HaplotypeScore=80.0149;InbreedingCoeff=0.9433;MQ=72.46;MQ0=0;MQRankSum=-2.968;QD=23.29;ReadPosRankSum=-2.889;VQSLOD=4.1899;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:93.29:0,93,1123	1/1:1,10:11:30.05:290,30,0	0/1:13,1:14:2.04:2,0,210	0/0:13,0:13:30.03:0,30,325	0/0:25,1:26:43.23:0,43,794	0/0:26,0:26:57.17:0,57,689	0/0:14,1:15:13.15:0,13,442	1/1:5,26:31:72.10:695,72,0	0/0:22,0:22:60.18:0,60,719	1/1:1,25:26:75.07:711,75,0	1/1:3,24:27:69.10:666,69,0	0/0:29,0:29:81.25:0,81,979	0/0:18,0:18:51.16:0,51,616	0/0:24,0:24:72.21:0,72,859	1/1:3,15:18:42.06:406,42,0	1/1:2,25:27:69.11:666,69,0	0/0:33,0:33:93.27:0,93,1112	1/1:0,24:24:66.11:637,66,0	0/0:22,0:22:51.15:0,51,606	0/0:20,0:20:45.14:0,45,543	0/0:12,0:12:33.10:0,33,399	0/0:28,0:28:78.21:0,78,920	0/0:21,0:21:54.15:0,54,640	0/0:25,0:25:69.20:0,69,822	1/1:1,22:23:63.10:608,63,0	0/0:30,0:30:75.23:0,75,906	0/0:32,0:32:87.26:0,87,1039	0/0:16,0:16:48.14:0,48,569
chr10	45185122	.	CCTCAT	C	7314.85	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=13.239;DP=645;FS=8.156;HRun=0;HaplotypeScore=127.5204;InbreedingCoeff=0.9409;MQ=82.47;MQ0=0;MQRankSum=-9.338;QD=49.76;ReadPosRankSum=-0.581;VQSLOD=4.9481;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:56:99:0,160,4819	1/1:2,1:3:3.01:63,3,0	0/0:15,0:15:39.13:0,39,1147	0/0:24,0:24:65.81:0,66,1711	0/0:19,0:19:45.03:0,45,1390	0/0:27,0:27:75.26:0,75,2275	0/0:26,0:26:69.22:0,69,2048	1/1:5,15:20:45.14:904,45,0	0/0:27,0:27:78.25:0,78,2304	1/1:1,16:17:48.13:926,48,0	1/1:2,8:10:24.08:499,24,0	0/0:36,0:36:99:0,105,3229	0/0:26,0:26:78.25:0,78,2272	0/0:23,0:23:66.23:0,66,2026	1/1:2,30:32:81.28:1657,81,0	1/1:1,31:32:81.28:1700,81,0	0/0:27,0:27:78.27:0,78,2400	1/1:0,18:18:39.13:770,39,0	0/0:13,0:13:36.11:0,36,1017	0/0:20,0:20:39:0,39,1208	0/0:44,0:44:99:0,126,3790	0/0:14,0:14:36.12:0,36,1115	0/0:8,0:8:24.08:0,24,743	0/0:41,0:41:99:0,114,3357	1/1:0,15:15:39.13:794,39,0	0/0:27,0:27:81.28:0,81,2511	0/0:24,0:24:72.25:0,72,2162	0/0:1,0:1:3.01:0,3,84
chr10	45185397	.	GCACA	G	5695.24	PASS	AB=0.975;AC=17;AF=0.304;AN=56;BaseQRankSum=9.003;DP=854;FS=10.877;HRun=0;HaplotypeScore=192.5500;InbreedingCoeff=0.9457;MQ=57.61;MQ0=7;MQRankSum=-10.969;QD=26.61;ReadPosRankSum=-1.030;VQSLOD=3.6415;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:57:99:0,144,3192	1/1:4,8:12:24.08:425,24,0	0/0:45,0:28:32.46:0,32,973	0/0:47,0:27:47.62:0,48,664	0/0:20,0:20:51.14:0,51,1042	0/0:15,0:15:36.08:0,36,820	0/0:24,0:24:53.97:0,54,1219	1/1:9,6:15:42.09:635,42,0	0/0:34,1:35:38.54:0,39,2077	1/1:9,22:31:80.72:1308,81,0	1/1:2,11:12:21.17:235,21,0	0/0:26,0:27:60.16:0,60,1327	0/0:25,0:24:44.96:0,45,916	0/0:38,0:37:96.16:0,96,1897	1/1:11,18:29:54.10:862,54,0	1/1:11,17:28:63:868,63,0	0/0:44,0:44:99:0,114,2483	1/1:11,11:22:13.62:621,14,0	0/0:24,0:23:51.13:0,51,891	0/0:23,0:24:53.65:0,54,995	0/0:66,0:66:99:0,144,2822	0/0:26,0:25:69.08:0,69,1484	0/0:28,0:28:69.11:0,69,1547	0/0:59,0:59:99:0,159,3448	1/1:7,18:25:53.93:741,54,0	0/1:38,1:39:1.34:1,0,1901	0/0:26,0:26:69.11:0,69,1409	0/0:9,0:9:26.99:0,27,520
chr10	45185445	.	AGCAC	A	7800.96	PASS	AB=1.000;AC=21;AF=0.389;AN=54;BaseQRankSum=2.311;DP=872;FS=0.000;HRun=0;HaplotypeScore=195.6115;InbreedingCoeff=0.8752;MQ=56.59;MQ0=9;MQRankSum=2.906;QD=22.48;ReadPosRankSum=6.473;VQSLOD=4.2618;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:25,26:51:66.14:1047,66,0	0/0:13,0:12:3.01:0,3,43	0/0:38,0:24:38.27:0,38,873	0/0:48,0:35:62.80:0,63,1097	0/0:21,0:21:51.17:0,51,1223	1/1:3,16:19:36.07:573,36,0	1/1:6,20:26:42.14:705,42,0	0/0:30,0:30:53.49:0,53,395	1/1:13,21:34:39.10:625,39,0	0/0:36,0:36:37.13:0,37,278	0/0:15,0:13:0:0,0,0	1/1:7,23:30:51.13:826,51,0	1/1:4,20:23:42.14:705,42,0	1/1:7,29:35:69.15:1097,69,0	0/1:28,0:28:2.04:2,0,28	./.	0/0:42,0:42:90.29:0,90,2029	0/0:21,0:21:20.85:0,21,228	0/0:31,0:31:65.95:0,66,1363	0/0:24,0:24:51.15:0,51,1165	0/0:92,0:91:99:0,181,4181	1/1:4,18:21:41.70:639,42,0	1/1:11,14:25:30.09:473,30,0	1/1:20,32:52:66.23:1108,66,0	0/0:20,0:20:2.68:0,3,11	0/0:33,0:33:83.20:0,83,1803	0/0:27,0:27:51.18:0,51,1236	0/0:11,0:11:27.09:0,27,669
chr10	45185449	.	C	CGCACGCACACACACACACGCAT	11072.94	PASS	AB=0.817;AC=16;AF=0.286;AN=56;BaseQRankSum=-2.914;DP=898;FS=2.612;HRun=0;HaplotypeScore=472.5496;InbreedingCoeff=0.6570;MQ=57.76;MQ0=8;MQRankSum=-8.482;QD=38.05;ReadPosRankSum=-4.912;VQSLOD=1.3510;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:98.07:0,98,3059	1/1:5,1:16:8.93:348,9,0	0/0:38,0:25:47.33:0,47,1216	0/0:46,0:35:58.66:0,59,1505	0/0:22,0:22:57.14:0,57,2166	0/0:19,0:19:39.13:0,39,1867	0/0:26,0:26:48.16:0,48,1764	1/1:32,0:32:87.24:3888,87,0	0/1:29,0:29:39.16:39,0,1524	1/1:13,10:48:87.14:3508,87,0	0/1:7,6:13:0:0,0,0	0/0:30,0:30:57.13:0,57,2404	0/0:23,0:22:42.07:0,42,1785	0/0:37,0:36:69.17:0,69,3155	0/1:13,4:35:7.60:841,0,8	1/1:9,6:27:3.01:227,3,0	0/0:41,0:41:99:0,108,4061	1/1:8,4:25:24.05:1511,24,0	0/0:31,0:31:71.91:0,72,2211	0/0:23,0:23:51.17:0,51,2220	0/0:90,0:89:99:0,190,8200	0/0:22,0:21:41.97:0,42,1720	0/0:23,0:23:32.52:0,33,1301	0/0:47,0:47:81.20:0,81,3214	1/1:10,6:31:5.98:268,6,0	0/1:32,0:32:99:443,0,3588	0/0:26,0:26:54.13:0,54,2733	0/0:12,0:12:30.03:0,30,1500
chr10	45185709	.	GA	G	5649.50	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=12.169;DP=661;FS=3.993;HRun=3;HaplotypeScore=67.9412;InbreedingCoeff=0.9997;MQ=84.16;MQ0=0;MQRankSum=-3.873;QD=32.47;ReadPosRankSum=-0.007;VQSLOD=4.9780;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,111,1525	1/1:1,15:16:36.11:445,36,0	0/0:24,0:25:73.27:0,73,930	0/0:17,0:17:32.61:0,33,520	0/0:30,0:30:84.27:0,84,1191	0/0:21,0:21:57.06:0,57,790	0/0:19,0:19:54.17:0,54,757	1/1:1,19:20:57.17:694,57,0	0/0:15,0:15:42.14:0,42,603	1/1:2,37:39:99:1281,105,0	1/1:0,15:15:36.11:446,36,0	0/0:31,0:31:93.28:0,93,1302	0/0:23,0:23:66.21:0,66,931	0/0:14,0:14:42.14:0,42,599	1/1:0,24:24:66.18:818,66,0	1/1:1,26:27:69.22:852,69,0	0/0:29,0:29:81.26:0,81,1145	1/1:0,15:15:42.13:520,42,0	0/0:27,0:27:81.27:0,81,1165	0/0:32,0:32:93.31:0,93,1328	0/0:25,0:25:72.22:0,72,1014	0/0:17,0:17:51.16:0,51,717	0/0:25,0:25:66.21:0,66,931	0/0:28,0:28:81.26:0,81,1141	1/1:0,18:18:48.15:594,48,0	0/0:28,1:29:40.38:0,40,1112	0/0:32,0:32:93.29:0,93,1301	0/0:9,0:9:27.09:0,27,388
chr10	45186167	.	GA	G	2326.08	PASS	AB=0.933;AC=13;AF=0.232;AN=56;BaseQRankSum=9.890;DP=597;FS=6.427;HRun=10;HaplotypeScore=62.6159;InbreedingCoeff=0.9314;MQ=77.73;MQ0=0;MQRankSum=0.534;QD=17.76;ReadPosRankSum=2.054;VQSLOD=4.2830;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,2:38:49.14:0,49,962	0/0:11,0:11:30.06:0,30,320	0/1:13,1:14:2.16:2,0,181	0/0:14,0:15:13.12:0,13,257	0/0:26,0:27:78.20:0,78,856	0/0:27,2:29:52.15:0,52,796	0/0:28,0:28:69.19:0,69,763	0/0:26,0:26:66.17:0,66,722	0/0:25,0:25:63.11:0,63,667	1/1:5,18:23:50.95:435,51,0	1/1:1,19:20:53.97:469,54,0	0/0:14,0:16:44.79:0,45,460	0/0:21,0:21:57.15:0,57,624	0/0:21,0:21:45.11:0,45,490	1/1:2,18:20:47.99:417,48,0	1/1:2,18:20:47.98:417,48,0	0/0:21,0:21:63.12:0,63,669	1/1:1,12:13:35.99:313,36,0	0/0:20,0:20:51.14:0,51,564	0/0:22,0:24:62.96:0,63,656	0/0:24,0:24:63.15:0,63,682	0/0:15,0:15:45.10:0,45,483	0/0:19,0:19:48.13:0,48,531	0/0:21,0:21:60.13:0,60,651	1/1:1,20:21:26.81:462,27,0	0/0:23,0:23:54.15:0,54,597	0/0:23,0:22:60.16:0,60,662	0/0:18,1:19:31.05:0,31,543
chr10	45186620	.	AATAAAT	A	2563.86	PASS	AB=1.000;AC=34;AF=0.708;AN=48;BaseQRankSum=1.270;DP=188;FS=1.601;HRun=0;HaplotypeScore=49.1879;InbreedingCoeff=0.3661;MQ=49.10;MQ0=11;MQRankSum=-3.289;QD=20.19;ReadPosRankSum=-3.056;VQSLOD=2.4320;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:8,0:8:11.75:53,0,12	1/1:4,0:4:9.03:126,9,0	./.	0/0:5,0:1:2.98:0,3,21	0/1:6,0:5:14.33:73,0,14	1/1:6,0:6:16.29:259,16,0	./.	1/1:30,0:28:36.26:856,36,0	0/1:4,0:4:1.38:36,0,1	1/1:2,0:2:3.01:43,3,0	1/1:5,0:4:3.01:43,3,0	1/1:7,0:7:9.53:89,10,0	1/1:9,0:9:10.43:111,10,0	1/1:5,0:5:9.63:100,10,0	0/0:6,0:3:2.90:0,3,16	1/1:2,0:2:3.01:42,3,0	0/0:19,0:19:54.17:0,54,1426	0/0:20,0:18:20.98:0,21,383	1/1:1,4:5:12.04:196,12,0	./.	0/0:3,0:2:3:0,3,26	./.	1/1:2,0:2:4.44:13,4,0	0/1:2,0:2:3.75:4,0,24	1/1:4,0:4:9.03:140,9,0	1/1:2,0:2:3.01:43,3,0	1/1:1,8:8:6.02:129,6,0	1/1:2,13:13:18.06:357,18,0
chr10	45186624	.	AAT	A	2265.87	PASS	AB=0.715;AC=39;AF=0.813;AN=48;BaseQRankSum=1.291;DP=174;FS=1.648;HRun=0;HaplotypeScore=40.7709;InbreedingCoeff=0.2895;MQ=49.02;MQ0=11;MQRankSum=-2.910;QD=17.98;ReadPosRankSum=-3.571;VQSLOD=2.8096;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:5,3:8:13.05:53,0,13	1/1:2,2:4:9.03:128,9,0	./.	0/0:5,0:1:2.98:0,3,22	1/1:0,4:4:11.97:128,12,0	1/1:1,5:6:9.89:165,10,0	./.	1/1:6,24:27:36.28:910,36,0	0/1:2,1:3:2.11:36,0,2	1/1:1,1:2:3.01:43,3,0	1/1:2,0:1:3.01:43,3,0	1/1:4,1:5:2.66:42,3,0	1/1:7,2:9:10.42:83,10,0	1/1:4,1:5:3.25:61,3,0	1/1:3,3:3:3.01:43,3,0	1/1:1,0:1:3.01:42,3,0	0/0:21,0:21:60.16:0,60,957	0/0:17,1:16:7.29:0,7,21	1/1:4,0:4:12.02:151,12,0	./.	1/1:1,2:2:3.01:43,3,0	./.	1/1:1,1:2:4.44:13,4,0	0/1:1,1:2:3.75:4,0,24	1/1:0,5:5:9.03:128,9,0	1/1:0,1:1:3.01:43,3,0	1/1:9,0:8:5.99:64,6,0	1/1:14,1:13:17.95:175,18,0
chr10	45186626	.	T	TAA	2379.73	PASS	AB=0.955;AC=35;AF=0.729;AN=48;BaseQRankSum=0.719;DP=173;FS=0.000;HRun=3;HaplotypeScore=41.4164;InbreedingCoeff=0.1896;MQ=48.66;MQ0=10;MQRankSum=-1.803;QD=17.37;ReadPosRankSum=-3.576;VQSLOD=-0.4656;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:6,0:7:13.05:53,0,13	1/1:3,0:3:9.03:128,9,0	./.	0/0:5,0:1:2.98:0,3,22	1/1:4,0:4:7.76:82,8,0	1/1:6,0:6:6.97:81,7,0	./.	1/1:35,0:32:48.31:1067,48,0	0/1:2,0:2:2.11:36,0,2	1/1:2,0:2:3.01:43,3,0	1/1:0,2:2:3.01:43,3,0	1/1:4,0:4:1.69:14,2,0	1/1:8,0:8:9.23:55,9,0	1/1:5,0:5:2.05:33,2,0	0/0:3,1:1:0.89:0,1,2	1/1:1,0:1:3.01:42,3,0	0/0:21,0:21:60.16:0,60,857	1/1:2,16:16:20.99:405,21,0	1/1:5,0:5:6.61:125,7,0	./.	0/0:2,1:2:0.89:0,1,2	./.	1/1:2,0:2:4.44:13,4,0	0/1:2,0:2:3.75:4,0,30	1/1:5,0:5:9.03:128,9,0	1/1:1,0:1:3.01:43,3,0	0/1:8,1:8:0.65:37,0,1	0/1:15,0:13:8.57:72,0,9
chr10	45186640	.	TAA	T	352.50	PASS	AB=0.836;AC=7;AF=0.146;AN=48;BaseQRankSum=4.205;DP=168;FS=1.124;HRun=3;HaplotypeScore=47.2142;InbreedingCoeff=-0.1594;MQ=43.37;MQ0=11;MQRankSum=-2.736;QD=13.56;ReadPosRankSum=1.393;VQSLOD=0.5412;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:5,0:5:28.67:29,0,104	0/0:2,0:2:6.02:0,6,87	./.	0/0:2,0:1:3.01:0,3,43	0/0:4,0:4:12.04:0,12,183	0/1:4,3:7:20.51:224,0,21	./.	0/0:38,0:32:90.29:0,90,1386	0/1:1,2:3:33.71:81,0,34	0/0:1,0:1:2.88:0,3,15	0/0:4,0:3:8.99:0,9,117	0/1:3,0:3:32.40:32,0,66	0/1:2,1:2:22.07:34,0,22	0/1:3,1:4:49.33:66,0,49	0/0:3,0:1:3.01:0,3,55	./.	0/0:24,0:24:66.17:0,66,1142	0/0:16,0:14:24.08:0,24,450	0/0:8,0:5:11.80:0,12,133	0/0:2,0:2:6.02:0,6,86	0/0:2,0:1:3.01:0,3,55	./.	0/0:2,0:2:5.99:0,6,64	0/1:1,0:1:0:0,0,0	0/0:5,0:5:9.03:0,9,117	0/0:1,0:1:3.01:0,3,43	0/0:11,0:10:11.96:0,12,128	0/0:16,0:14:20.80:0,21,216
chr10	45186655	.	AT	A	259.14	PASS	AB=0.810;AC=9;AF=0.180;AN=50;BaseQRankSum=4.659;DP=208;FS=9.353;HRun=1;HaplotypeScore=48.3454;InbreedingCoeff=0.1088;MQ=46.00;MQ0=10;MQRankSum=-4.456;QD=7.62;ReadPosRankSum=-0.253;VQSLOD=-0.2600;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:6,1:7:21.91:22,0,106	1/1:3,1:4:12.04:160,12,0	0/0:2,0:1:3.01:0,3,43	0/0:2,0:1:3.01:0,3,42	0/0:5,0:5:15.03:0,15,195	0/1:6,1:7:60.80:61,0,112	./.	0/0:42,0:35:89.22:0,89,987	0/1:2,1:3:11.88:12,0,78	./.	0/0:7,0:6:15.04:0,15,196	0/1:3,2:5:69.04:74,0,69	1/1:3,0:2:2.96:20,3,0	0/1:4,1:5:42.70:43,0,112	0/0:4,0:2:6.01:0,6,71	0/0:1,0:1:3.01:0,3,42	0/0:28,0:28:75.13:0,75,1091	0/0:18,0:16:30.10:0,30,443	0/0:9,0:6:15.03:0,15,197	0/0:3,0:3:9.03:0,9,126	0/0:3,0:2:6.02:0,6,88	./.	0/0:4,0:4:9.03:0,9,125	0/0:2,0:2:2.95:0,3,20	0/0:6,0:6:12.03:0,12,145	0/0:4,0:4:12.03:0,12,150	0/0:11,0:11:18.03:0,18,219	0/0:23,0:21:42.05:0,42,515
chr10	45186663	.	ATAAAT	A	362.94	PASS	AC=18;AF=0.346;AN=52;BaseQRankSum=5.330;DP=210;FS=0.000;HRun=0;HaplotypeScore=58.6488;InbreedingCoeff=0.7436;MQ=54.21;MQ0=8;MQRankSum=0.224;QD=9.07;ReadPosRankSum=-2.504;VQSLOD=1.0365;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:5,2:7:12.48:55,12,0	0/0:3,0:3:6.59:0,7,29	0/0:4,0:3:9.02:0,9,97	0/0:2,0:1:3.01:0,3,37	0/0:7,0:7:21.07:0,21,292	1/1:6,3:9:15.53:184,16,0	1/1:1,0:1:2.74:12,3,0	0/0:32,0:25:30.56:0,31,404	1/1:4,0:4:4.99:20,5,0	./.	0/0:6,0:6:17.08:0,17,189	1/1:4,1:5:11.57:82,12,0	1/1:1,1:1:3.01:54,3,0	1/1:4,1:5:6.54:75,7,0	0/0:4,0:3:9.03:0,9,127	0/0:2,0:2:6.02:0,6,72	0/0:30,0:30:75.68:0,76,1836	0/0:17,0:16:24.88:0,25,669	0/0:10,0:8:21:0,21,291	0/0:3,0:3:9.03:0,9,117	0/0:3,0:2:6.02:0,6,95	./.	1/1:5,0:5:12.61:47,13,0	1/1:2,0:1:2.60:10,3,0	0/0:7,0:7:13.28:0,13,148	0/0:5,0:5:15.05:0,15,191	0/0:14,0:14:27:0,27,307	0/0:21,0:19:41.81:0,42,484
chr10	45186671	.	A	AT	322.16	PASS	AB=1.000;AC=7;AF=0.130;AN=54;BaseQRankSum=0.467;DP=222;FS=10.897;HRun=0;HaplotypeScore=43.1700;InbreedingCoeff=0.2893;MQ=58.90;MQ0=4;MQRankSum=-4.227;QD=5.75;ReadPosRankSum=-2.467;VQSLOD=0.8587;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:8:21:0,21,224	1/1:0,3:3:9.03:125,9,0	0/0:5,0:4:12.03:0,12,151	0/0:2,0:1:3.01:0,3,42	0/0:12,0:12:27.07:0,27,347	0/0:10,0:10:23.90:0,24,232	0/0:1,0:1:3.01:0,3,38	1/1:14,11:21:9.88:264,10,0	0/0:6,0:6:18:0,18,176	0/0:2,0:2:4.99:0,5,18	0/0:6,1:7:6.10:0,6,75	0/0:4,0:4:9.01:0,9,101	0/0:3,0:2:5.93:0,6,44	0/0:4,0:4:11.95:0,12,131	0/0:4,0:4:8.23:0,8,37	0/1:3,0:3:15.88:16,0,16	0/0:30,0:30:79.15:0,79,1091	0/1:17,0:16:34.62:35,0,78	0/0:10,0:10:24.08:0,24,331	0/0:3,0:3:9.03:0,9,126	0/0:3,0:3:9.03:0,9,126	./.	0/0:6,0:6:18.05:0,18,218	0/0:2,0:1:3.01:0,3,38	0/1:8,0:8:8.21:8,0,44	0/0:5,0:5:15.05:0,15,209	0/0:16,0:16:33.11:0,33,458	0/0:23,0:21:48.12:0,48,625
chr10	45186966	.	G	GA	4769.43	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-14.674;DP=612;FS=4.321;HRun=7;HaplotypeScore=58.2571;InbreedingCoeff=0.9897;MQ=69.15;MQ0=0;MQRankSum=-1.966;QD=29.81;ReadPosRankSum=-0.437;VQSLOD=5.1851;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:90.14:0,90,869	1/1:0,6:6:18.06:217,18,0	0/0:21,0:20:46.57:0,47,447	0/0:10,0:10:15.08:0,15,97	0/0:27,0:27:78.12:0,78,750	0/0:24,0:25:68.11:0,68,631	0/0:25,0:25:66.10:0,66,637	1/1:7,31:38:93.26:1098,93,0	0/0:24,0:24:60.08:0,60,579	1/1:1,22:23:66.20:797,66,0	1/1:0,20:20:57.17:685,57,0	0/0:20,0:20:54.08:0,54,521	0/0:18,0:18:51.08:0,51,492	0/0:27,0:27:75.12:0,75,724	1/1:2,12:14:33.10:399,33,0	1/1:6,23:29:11.25:703,11,0	0/0:31,0:31:87.09:0,87,826	1/1:2,13:15:36.11:435,36,0	0/0:22,0:22:66.06:0,66,621	0/0:18,0:18:51.08:0,51,492	0/0:24,0:24:63.10:0,63,608	0/0:15,0:15:36.05:0,36,342	0/0:11,0:11:33.05:0,33,318	0/0:21,0:21:60.09:0,60,579	1/1:3,12:15:36.11:435,36,0	0/0:31,1:32:44.87:0,45,716	0/0:29,0:29:75.11:0,75,724	0/0:17,0:17:45.07:0,45,434
chr10	45187423	.	GCATA	G	6354.96	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=6.275;DP=824;FS=10.884;HRun=0;HaplotypeScore=216.1182;InbreedingCoeff=0.9983;MQ=53.99;MQ0=4;MQRankSum=2.719;QD=22.78;ReadPosRankSum=3.244;VQSLOD=3.3814;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:16,25:41:58.48:871,58,0	0/0:14,0:14:36.07:0,36,727	0/0:38,0:25:48.29:0,48,989	0/0:40,0:20:29.74:0,30,652	0/0:24,0:24:50.64:0,51,1121	1/1:9,24:33:57.16:935,57,0	1/1:15,20:34:74.94:1175,75,0	0/0:48,0:47:99:0,117,2230	1/1:10,12:22:29.12:321,29,0	0/0:37,0:34:96.23:0,96,1995	0/0:21,0:20:37.01:0,37,725	1/1:4,17:21:32.99:487,33,0	1/1:5,19:24:36.53:560,37,0	1/1:10,22:31:44.10:659,44,0	0/0:32,0:30:69.41:0,69,1178	0/0:34,0:31:43.11:0,43,1084	0/0:25,0:25:56.89:0,57,1278	0/0:11,0:11:21.52:0,22,450	0/0:22,0:20:54.18:0,54,1270	0/0:35,0:35:97.34:0,97,2116	0/0:59,0:59:99:0,150,3378	1/1:11,20:31:33.01:453,33,0	1/1:7,16:23:36.02:538,36,0	1/1:6,11:17:20.09:356,20,0	0/0:25,0:25:57.58:0,58,1199	0/0:33,0:32:90.25:0,90,2103	0/0:32,0:32:71.18:0,71,1433	0/0:15,0:15:36.01:0,36,652
chr10	45187471	.	C	CCTGCCTGT	7803.95	PASS	AB=0.609;AC=31;AF=0.554;AN=56;BaseQRankSum=10.604;DP=842;FS=2.099;HRun=0;HaplotypeScore=304.2575;InbreedingCoeff=-0.2775;MQ=61.78;MQ0=5;MQRankSum=-3.317;QD=10.60;ReadPosRankSum=7.336;VQSLOD=2.6895;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:7,0:53:2.55:369,0,3	0/1:4,0:13:58.92:115,0,59	0/0:33,0:25:60.04:0,60,861	0/0:25,0:20:44.45:0,44,904	1/1:3,0:36:37.02:432,37,0	0/1:12,0:31:99:213,0,101	0/1:13,0:37:95.06:254,0,95	0/1:34,0:34:99:400,0,131	1/1:6,0:23:2.33:163,2,0	0/1:12,0:46:49.32:1874,0,49	0/0:3,1:21:3:0,3,25	1/1:6,0:28:4.60:181,5,0	1/1:4,0:25:10.72:206,11,0	0/1:10,0:28:33.78:204,0,34	0/1:7,0:35:68.04:373,0,68	0/1:12,0:29:73.97:319,0,74	0/0:26,0:26:72.06:0,72,1790	0/1:3,0:12:15.96:154,0,16	0/1:15,0:27:99:263,0,200	0/1:13,0:35:99:342,0,99	0/1:14,0:47:99:339,0,129	1/1:6,0:34:17.59:148,18,0	0/1:7,0:25:65.33:115,0,65	1/1:5,0:29:0.37:269,0,0	0/1:6,0:26:52.08:76,0,52	1/1:4,0:31:16.31:657,16,0	0/1:5,0:28:52.14:207,0,52	0/1:1,0:9:0.13:132,0,0
chr10	45188132	.	GCGCGCACA	G	4924.73	PASS	AB=0.808;AC=20;AF=0.357;AN=56;BaseQRankSum=7.233;DP=630;FS=2.650;HRun=0;HaplotypeScore=191.9438;InbreedingCoeff=0.7628;MQ=56.15;MQ0=7;MQRankSum=-8.725;QD=17.91;ReadPosRankSum=5.371;VQSLOD=4.1082;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:9,20:28:11.93:254,12,0	0/0:7,0:7:9.02:0,9,236	0/1:16,0:14:22.47:22,0,185	0/0:21,0:9:7.10:0,7,214	0/0:22,0:22:59.93:0,60,1881	1/1:6,9:16:11.20:227,11,0	1/1:12,10:22:1.43:17,1,0	0/0:13,0:12:28.51:0,29,645	1/1:13,25:40:44.16:1163,44,0	0/0:32,0:32:87.28:0,87,2227	0/0:13,0:13:11.57:0,12,158	1/1:7,18:25:28.75:628,29,0	1/1:6,15:22:26.56:674,27,0	1/1:3,23:26:37.15:920,37,0	0/0:36,0:36:44.87:0,45,1001	0/0:15,0:15:23.93:0,24,539	0/0:30,0:30:49.71:0,50,2363	0/0:19,0:18:9.33:0,9,253	0/0:19,0:19:54.17:0,54,1175	0/0:14,0:14:42.14:0,42,1170	0/0:30,0:29:67.63:0,68,1861	0/1:9,13:24:12.70:364,0,13	1/1:7,20:30:26.58:479,27,0	1/1:9,16:25:10.79:177,11,0	0/0:22,0:22:16.95:0,17,611	0/0:26,0:26:78.25:0,78,2222	0/0:23,0:23:69.22:0,69,2497	0/0:13,0:13:33.11:0,33,948
chr10	45188136	.	G	GCGCACA	3508.65	PASS	AB=0.705;AC=13;AF=0.232;AN=56;BaseQRankSum=-5.145;DP=647;FS=1.073;HRun=0;HaplotypeScore=191.4185;InbreedingCoeff=0.6227;MQ=54.86;MQ0=9;MQRankSum=-0.745;QD=20.28;ReadPosRankSum=0.438;VQSLOD=3.2162;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:30:20.91:0,21,223	1/1:0,0:8:7.84:182,8,0	0/0:11,0:7:8.74:0,9,72	0/0:22,0:9:10.35:0,10,157	0/0:19,0:21:57.08:0,57,974	0/0:16,0:16:24.01:0,24,263	0/0:23,0:23:23.93:0,24,192	0/1:18,0:17:99:182,0,140	0/0:42,0:42:38.26:0,38,892	1/1:4,25:37:91.54:1688,92,0	1/1:0,12:14:2.84:50,3,0	0/0:24,0:24:35.67:0,36,454	0/0:23,0:23:47.99:0,48,603	0/0:26,0:26:42.12:0,42,629	1/1:2,29:35:24.08:772,24,0	0/1:2,10:15:12.79:154,0,13	0/0:26,0:30:32.92:0,33,1226	0/1:6,0:21:40.82:41,0,51	0/0:19,0:19:50.94:0,51,641	0/0:16,0:16:45.02:0,45,599	0/0:24,0:26:60.55:0,61,945	0/0:24,0:24:35.96:0,36,406	0/0:30,0:30:39.03:0,39,460	0/0:24,0:24:20.75:0,21,280	1/1:2,17:24:13.23:440,13,0	0/0:25,0:26:23.24:0,23,932	0/0:21,0:24:72.13:0,72,1396	0/0:12,0:14:36.01:0,36,513
chr10	45188735	.	G	GA	3427.99	PASS	AB=0.634;AC=13;AF=0.232;AN=56;BaseQRankSum=-4.564;DP=560;FS=4.421;HRun=8;HaplotypeScore=107.6914;InbreedingCoeff=0.8711;MQ=52.50;MQ0=8;MQRankSum=1.882;QD=21.97;ReadPosRankSum=1.522;VQSLOD=3.4915;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,129,1176	0/0:13,0:13:29.99:0,30,267	0/0:8,0:2:6:0,6,55	0/0:8,0:3:7.12:0,7,45	1/1:8,22:30:57.17:656,57,0	0/0:16,0:16:35.99:0,36,324	0/0:33,0:33:75.01:0,75,684	0/0:15,0:15:41.99:0,42,376	0/0:20,0:20:51.02:0,51,467	0/0:16,0:14:17.98:0,18,162	0/0:20,0:19:39.01:0,39,355	0/0:15,0:15:39.02:0,39,357	0/0:16,0:16:41.99:0,42,374	0/0:14,0:14:36.01:0,36,324	0/0:19,0:19:45.02:0,45,410	0/0:14,0:14:27.01:0,27,246	0/0:41,0:41:99:0,104,933	0/0:15,0:15:35.96:0,36,316	1/1:5,15:19:45.11:506,45,0	1/1:6,17:22:38.95:430,39,0	1/1:1,22:21:51.15:589,51,0	0/0:17,0:17:42.01:0,42,383	0/0:16,0:16:39.02:0,39,356	0/0:24,0:24:66.03:0,66,604	0/0:10,0:9:11.99:0,12,109	0/1:11,15:25:8.40:382,0,8	1/1:2,24:23:54.16:623,54,0	1/1:0,7:7:21.06:242,21,0
chr10	45188749	.	G	GAAA	3628.47	PASS	AB=0.955;AC=15;AF=0.268;AN=56;BaseQRankSum=3.171;DP=575;FS=0.000;HRun=9;HaplotypeScore=120.6054;InbreedingCoeff=0.8738;MQ=56.62;MQ0=5;MQRankSum=-5.943;QD=24.03;ReadPosRankSum=-2.686;VQSLOD=1.3191;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:58:99:0,165,1994	0/0:12,0:12:21.04:0,21,265	0/0:11,0:5:5.47:0,5,142	0/0:9,0:6:8.11:0,8,144	0/0:27,0:27:54.08:0,54,667	0/0:16,0:16:42.13:0,42,528	0/0:27,0:28:75.11:0,75,907	1/1:4,0:17:16.20:35,16,0	0/0:17,0:17:51.16:0,51,644	1/1:5,16:22:39.12:694,39,0	1/1:4,17:21:48.08:847,48,0	0/0:15,0:15:42.13:0,42,531	0/0:14,0:15:45.08:0,45,548	0/0:15,0:15:42.13:0,42,529	1/1:6,13:20:33.06:556,33,0	1/1:2,14:16:30.10:591,30,0	0/0:36,0:36:87.17:0,87,1068	1/1:3,14:19:30.06:518,30,0	0/0:24,0:24:66.18:0,66,816	0/0:20,0:18:39.09:0,39,491	0/0:23,0:22:48.13:0,48,592	0/0:15,0:15:39.12:0,39,493	0/0:19,0:19:54.17:0,54,681	0/0:24,0:24:66.19:0,66,831	1/1:4,8:12:18.06:352,18,0	0/1:20,1:20:36.39:36,0,481	0/0:28,0:25:59.94:0,60,740	0/0:11,0:12:35.74:0,36,397
chr10	45189150	.	T	TAA	9283.42	PASS	AB=0.621;AC=37;AF=0.661;AN=56;BaseQRankSum=-8.189;DP=578;FS=3.020;HRun=10;HaplotypeScore=79.6067;InbreedingCoeff=0.9031;MQ=73.08;MQ0=0;MQRankSum=-3.618;QD=24.49;ReadPosRankSum=-0.622;VQSLOD=4.6480;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,0:19:24.83:88,25,0	1/1:1,0:8:14.97:53,15,0	0/0:15,0:14:25.77:0,26,239	0/0:7,0:7:11.99:0,12,114	1/1:3,26:32:82.63:1041,83,0	1/1:4,0:25:34.83:155,35,0	0/1:7,0:18:43.49:43,0,62	1/1:8,0:27:47.15:179,47,0	1/1:1,14:17:44.64:625,45,0	0/0:35,0:35:90.17:0,90,905	0/0:26,0:27:62.82:0,63,622	1/1:0,15:17:35.60:485,36,0	1/1:4,19:24:45.15:672,45,0	1/1:2,9:11:21.07:314,21,0	0/0:23,0:23:37.97:0,38,577	0/0:18,0:19:53.86:0,54,531	0/0:23,0:25:71.86:0,72,702	0/0:19,0:19:54.12:0,54,549	1/1:8,8:22:41.11:552,41,0	1/1:6,30:36:84.13:1146,84,0	1/1:2,13:15:30.10:447,30,0	1/1:5,10:15:30.06:423,30,0	1/1:3,17:21:48.12:690,48,0	1/1:1,7:9:9.03:134,9,0	0/0:28,0:29:80.89:0,81,798	1/1:2,17:19:48.14:681,48,0	1/1:4,25:30:75.25:1111,75,0	1/1:2,12:14:30.10:446,30,0
chr10	45190040	.	AG	A	981.12	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.203;DP=692;FS=12.376;HRun=2;HaplotypeScore=67.2440;InbreedingCoeff=0.9999;MQ=90.64;MQ0=0;MQRankSum=0.226;QD=32.70;ReadPosRankSum=-4.396;VQSLOD=1.0522;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:99:0,99,1480	0/0:14,0:14:42.14:0,42,623	0/0:30,0:30:87.22:0,87,1161	0/0:24,0:24:66.05:0,66,896	0/0:26,0:26:75.25:0,75,1123	0/0:24,0:24:72.24:0,72,1075	0/0:19,0:19:57.17:0,57,817	1/1:1,29:30:87.24:1076,87,0	0/0:30,0:30:90.30:0,90,1347	0/0:33,0:33:96.32:0,96,1421	0/0:15,0:15:45.15:0,45,664	0/0:24,0:24:72.24:0,72,1072	0/0:16,0:16:48.16:0,48,717	0/0:23,0:23:63.21:0,63,941	0/0:30,0:30:87.28:0,87,1282	0/0:18,0:18:54.18:0,54,809	0/0:34,0:34:99:0,102,1489	0/0:16,0:16:45.14:0,45,652	0/0:21,0:21:63.19:0,63,905	0/0:24,0:24:72.24:0,72,1072	0/0:39,0:39:99:0,117,1701	0/0:29,0:29:87.29:0,87,1295	0/0:20,0:20:60.19:0,60,876	0/0:27,0:27:75.25:0,75,1123	0/0:25,0:25:75.25:0,75,1124	0/0:27,0:27:81.23:0,81,1171	0/0:25,0:24:75.23:0,75,1083	0/0:16,0:16:48.13:0,48,677
chr10	45190396	.	T	TG	1649.74	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-10.006;DP=723;FS=3.708;HRun=2;HaplotypeScore=80.8366;InbreedingCoeff=0.9996;MQ=76.54;MQ0=0;MQRankSum=-1.851;QD=35.10;ReadPosRankSum=0.102;VQSLOD=3.9142;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,108,1335	0/0:12,0:12:30.09:0,30,372	0/0:19,0:19:50.38:0,50,538	0/0:16,0:16:38.61:0,39,457	0/0:16,0:16:45.10:0,45,539	1/1:0,24:24:60.20:864,60,0	1/1:2,21:23:63.21:907,63,0	0/0:25,0:25:72.20:0,72,861	0/0:28,0:28:81.24:0,81,992	0/0:27,0:27:78.23:0,78,947	0/0:13,0:13:36.11:0,36,446	0/0:28,0:28:81.25:0,81,1003	0/0:34,0:34:99:0,102,1234	0/0:28,0:28:81.25:0,81,1003	0/0:31,0:31:87.26:0,87,1066	0/0:24,0:24:69.20:0,69,843	0/0:38,0:38:99:0,108,1339	0/0:17,0:17:48.10:0,48,565	0/0:19,0:19:54.17:0,54,669	0/0:22,0:22:66.21:0,66,817	0/0:54,0:54:99:0,141,1719	0/0:32,0:32:93.28:0,93,1138	0/0:21,0:21:54.17:0,54,662	0/0:30,0:30:87.27:0,87,1078	0/0:31,0:31:81.25:0,81,1001	0/0:25,0:25:69.22:0,69,855	0/0:34,0:34:99:0,102,1249	0/0:16,0:16:45.14:0,45,557
chr10	45193397	.	T	TG	5180.25	PASS	AB=0.812;AC=23;AF=0.411;AN=56;BaseQRankSum=13.780;DP=899;FS=110.524;HRun=1;HaplotypeScore=125.3619;InbreedingCoeff=-0.6792;MQ=56.49;MQ0=9;MQRankSum=-12.325;QD=6.83;ReadPosRankSum=2.839;VQSLOD=1.3289;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:50,4:50:17.34:17,0,1462	0/1:12,4:15:53.47:53,0,461	0/0:27,0:20:57.18:0,57,769	0/0:29,0:24:72.23:0,72,965	0/1:21,5:25:35.30:35,0,695	0/1:20,3:22:35.41:35,0,685	0/1:28,11:35:99:158,0,842	0/1:32,10:37:99:148,0,1189	0/0:29,1:30:36.46:0,36,1068	0/1:32,10:40:99:269,0,1141	0/1:14,3:16:2.65:3,0,541	0/1:22,8:30:99:250,0,792	0/1:16,8:24:99:313,0,558	0/1:22,5:27:99:158,0,820	0/1:22,12:34:99:432,0,745	0/1:26,5:31:99:158,0,842	0/1:32,18:48:99:721,0,1034	0/1:15,9:24:99:365,0,475	0/1:20,4:19:89.62:90,0,575	0/0:25,4:27:21.43:0,21,874	0/1:57,22:79:99:775,0,2093	0/1:26,8:34:99:202,0,837	0/0:23,2:25:18.42:0,18,831	0/1:27,13:40:99:427,0,821	0/1:19,2:21:32.40:32,0,734	0/1:32,4:35:44.37:44,0,1159	0/1:24,10:33:99:337,0,829	0/1:8,4:12:99:156,0,300
chr10	45193734	.	C	CT	3914.16	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-10.175;DP=679;FS=1.249;HRun=9;HaplotypeScore=86.7160;InbreedingCoeff=0.9657;MQ=62.23;MQ0=9;MQRankSum=4.053;QD=18.91;ReadPosRankSum=2.506;VQSLOD=3.8840;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,26:31:66.18:728,66,0	0/0:8,0:8:21:0,21,182	0/0:42,0:10:12.32:0,12,150	0/0:68,0:26:15.58:0,16,226	0/0:19,0:18:47.98:0,48,415	1/1:2,17:19:36.10:398,36,0	1/1:1,10:11:18.05:199,18,0	0/0:28,0:27:50.69:0,51,428	1/1:6,13:18:26.97:299,27,0	0/0:20,0:19:47.97:0,48,412	0/0:23,0:23:56.96:0,57,495	1/1:1,13:14:27.07:299,27,0	1/1:7,18:23:36.10:398,36,0	1/1:6,16:23:3.51:272,4,0	0/0:20,0:20:47.99:0,48,417	0/0:21,0:21:47.97:0,48,413	0/0:17,0:17:44.97:0,45,387	0/0:15,0:15:41.99:0,42,364	0/0:32,0:30:77.95:0,78,674	0/0:27,0:27:59.94:0,60,517	0/0:20,1:21:16.98:0,17,359	1/1:3,18:22:47.96:510,48,0	1/1:3,18:22:39.05:415,39,0	1/1:2,19:21:36.10:397,36,0	0/0:27,0:27:71.98:0,72,625	0/0:25,0:25:68.95:0,69,596	0/0:34,1:35:47.69:0,48,643	0/0:21,0:21:62.99:0,63,547
chr10	45194626	.	GTGTCCTTTGCCTTACAGAAACTT	G	1048.38	PASS	AC=2;AF=0.040;AN=50;BaseQRankSum=4.121;DP=745;FS=1.568;HRun=0;HaplotypeScore=193.5845;InbreedingCoeff=0.8935;MQ=37.13;MQ0=85;MQRankSum=-3.272;QD=87.36;ReadPosRankSum=0.093;VQSLOD=3.3242;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:38:47.94:0,48,4744	1/1:5,7:11:18.06:1138,18,0	./.	./.	0/0:27,0:23:36.12:0,36,3428	0/0:27,0:24:24.08:0,24,2493	0/0:16,0:9:12.04:0,12,878	./.	0/0:28,0:26:30.10:0,30,2886	0/0:36,0:30:72.25:0,72,6781	0/0:34,0:28:30.10:0,30,2832	0/0:25,0:21:27.09:0,27,2867	0/0:28,0:24:18.06:0,18,1962	0/0:22,0:16:15.05:0,15,1636	0/0:35,0:27:30:0,30,2769	0/0:29,0:22:20.84:0,21,2238	0/0:37,0:30:36.12:0,36,3887	0/0:15,0:11:15.05:0,15,1545	0/0:34,0:10:27.09:0,27,2657	0/0:45,0:40:66.22:0,66,5957	0/0:46,0:38:66.23:0,66,6560	0/0:23,0:18:30.10:0,30,2653	0/0:14,0:12:15.05:0,15,1002	0/0:22,0:17:18.06:0,18,1883	0/0:19,0:16:30.10:0,30,2718	0/0:32,0:26:72.23:0,72,7142	0/0:43,0:33:26.99:0,27,2266	0/0:15,0:11:24.08:0,24,2556
chr10	45195154	.	CCTGT	C	146.93	PASS	AC=2;AF=0.037;AN=54;BaseQRankSum=3.129;DP=571;FS=8.858;HRun=0;HaplotypeScore=86.5439;InbreedingCoeff=0.9604;MQ=57.80;MQ0=4;MQRankSum=2.104;QD=24.49;ReadPosRankSum=2.053;VQSLOD=2.8796;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:33.11:0,33,832	1/1:0,6:5:12.04:233,12,0	0/0:32,0:18:51.13:0,51,1202	0/0:14,0:10:27.09:0,27,591	0/0:24,0:24:54.02:0,54,1363	0/0:31,0:31:57.13:0,57,1559	0/0:18,0:18:51.13:0,51,1333	./.	0/0:20,0:20:42.14:0,42,1130	0/0:30,0:30:90.31:0,90,2319	0/0:22,0:22:54.19:0,54,1435	0/0:22,0:22:42.14:0,42,1113	0/0:17,0:17:42.14:0,42,1113	0/0:12,0:12:24.08:0,24,648	0/0:22,0:21:42.14:0,42,1139	0/0:24,0:24:51.18:0,51,1367	0/0:22,0:22:42.14:0,42,1150	0/0:9,0:9:21.07:0,21,575	0/0:20,0:20:57.17:0,57,1452	0/0:32,0:32:87.30:0,87,2320	0/0:25,0:25:72.25:0,72,1939	0/0:23,0:23:48.15:0,48,1239	0/0:24,0:24:57.20:0,57,1517	0/0:11,0:11:30.10:0,30,812	0/0:21,0:21:45.08:0,45,1232	0/0:27,0:27:78.26:0,78,2080	0/0:32,0:31:90.31:0,90,2460	0/0:11,0:11:33.11:0,33,886
chr10	45196694	.	GT	G	327.48	PASS	AB=0.760;AC=3;AF=0.054;AN=56;BaseQRankSum=-2.213;DP=639;FS=2.493;HRun=2;HaplotypeScore=76.3053;InbreedingCoeff=0.5113;MQ=42.46;MQ0=62;MQRankSum=-3.613;QD=7.99;ReadPosRankSum=-2.150;VQSLOD=0.3577;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:26:57.19:0,57,853	1/1:0,3:3:6.02:78,6,0	0/0:5,0:2:6.02:0,6,87	0/0:6,0:3:9.03:0,9,135	0/0:33,0:29:75.25:0,75,1123	0/0:27,0:27:51.13:0,51,738	0/0:14,0:9:24.08:0,24,359	0/1:26,12:11:11.79:344,0,12	0/0:25,0:24:48.16:0,48,717	0/0:29,0:24:69.23:0,69,1029	0/0:23,0:21:48.15:0,48,719	0/0:21,0:20:36.12:0,36,538	0/0:20,0:20:39.12:0,39,564	0/0:19,0:16:29.92:0,30,404	0/0:26,0:19:27.05:0,27,379	0/0:20,0:19:36.12:0,36,537	0/0:28,0:23:51.10:0,51,715	0/0:18,0:14:21.07:0,21,314	0/0:42,0:17:45.15:0,45,675	0/0:23,0:20:51.17:0,51,764	0/0:11,0:8:21.06:0,21,295	0/0:16,0:14:30.10:0,30,448	0/0:24,0:19:39.12:0,39,584	0/0:25,0:24:60.20:0,60,899	0/0:19,0:18:48.16:0,48,718	0/0:25,0:19:57.15:0,57,805	0/0:37,0:34:78.22:0,78,1141	0/0:28,0:24:72.24:0,72,1079
chr10	45196713	.	CT	C	1956.09	PASS	AB=0.962;AC=15;AF=0.268;AN=56;BaseQRankSum=-1.944;DP=664;FS=16.314;HRun=12;HaplotypeScore=73.3152;InbreedingCoeff=0.7982;MQ=41.96;MQ0=35;MQRankSum=2.510;QD=9.06;ReadPosRankSum=3.071;VQSLOD=1.0468;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,1:26:33.88:0,34,525	0/0:3,0:3:0:0,0,0	0/0:13,0:2:5.80:0,6,43	0/0:10,0:3:3.01:0,3,30	1/1:21,22:32:8.12:346,8,0	0/0:22,2:24:4.61:0,5,397	0/0:17,2:14:6.80:0,7,239	0/0:38,0:26:66.09:0,66,657	0/0:24,3:25:21.56:0,22,372	0/0:18,0:26:38.87:0,39,215	0/0:17,0:26:40.54:0,41,263	0/0:22,1:21:12.54:0,13,282	0/0:17,0:17:33.03:0,33,324	0/0:12,1:13:26.10:0,26,287	0/1:13,1:16:2.07:2,0,81	0/0:6,0:14:23.53:0,24,137	0/0:30,0:23:42.04:0,42,415	0/0:9,0:13:16.88:0,17,82	1/1:13,10:14:26.87:207,27,0	1/1:1,27:24:56.76:441,57,0	1/1:1,9:6:17.93:139,18,0	0/0:16,1:16:6.80:0,7,241	0/0:25,1:22:18.66:0,19,349	0/0:25,1:24:56.84:0,57,578	0/0:6,0:17:33.35:0,33,191	1/1:10,15:19:25.78:261,26,0	1/1:9,27:32:56.74:441,57,0	1/1:11,14:21:18.46:306,18,0
chr10	45198916	.	C	CT	8815.13	PASS	AC=48;AF=1.000;AN=48;DP=306;FS=0.000;HRun=1;HaplotypeScore=93.2189;InbreedingCoeff=-0.0256;MQ=29.52;MQ0=14;QD=30.40;VQSLOD=4.4293;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,10:10:18.06:269,18,0	1/1:0,10:4:12.04:179,12,0	./.	./.	1/1:4,13:13:30.10:445,30,0	1/1:0,9:8:24.08:358,24,0	1/1:0,4:4:12.04:178,12,0	1/1:2,3:5:12:155,12,0	1/1:0,9:9:24.08:358,24,0	1/1:0,21:18:45.15:673,45,0	1/1:0,12:9:27.09:399,27,0	1/1:2,19:19:36.12:528,36,0	1/1:1,14:14:33.11:493,33,0	1/1:1,14:14:36.12:516,36,0	1/1:1,8:9:21.04:290,21,0	1/1:0,6:4:12.04:179,12,0	1/1:0,3:3:6.02:90,6,0	1/1:0,2:2:3.01:45,3,0	1/1:2,1:1:3.01:45,3,0	1/1:2,12:10:27.09:402,27,0	./.	1/1:1,11:12:30.10:446,30,0	1/1:4,16:16:39.13:570,39,0	./.	1/1:4,15:15:30.10:446,30,0	1/1:2,20:21:57.19:853,57,0	1/1:4,21:25:51.16:743,51,0	1/1:2,3:5:12.01:155,12,0
chr10	45198955	.	GA	G	1611.12	PASS	AC=34;AF=0.850;AN=40;BaseQRankSum=-1.902;DP=133;FS=1.659;HRun=1;HaplotypeScore=36.9061;InbreedingCoeff=0.4081;MQ=62.73;MQ0=0;MQRankSum=-3.490;QD=17.70;ReadPosRankSum=1.985;VQSLOD=3.9895;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:6,0:4:11.66:0,12,97	0/0:3,0:3:5.99:0,6,50	0/0:0,12:7:0.47:0,0,1	1/1:0,1:1:3.01:42,3,0	1/1:0,3:3:9.03:126,9,0	1/1:0,7:7:15.05:205,15,0	1/1:0,3:3:6.02:77,6,0	1/1:1,6:7:15.05:209,15,0	1/1:1,5:5:2:40,2,0	1/1:0,9:6:2.97:20,3,0	1/1:0,7:6:12.04:155,12,0	1/1:0,5:3:6.02:84,6,0	./.	1/1:0,3:2:6.02:76,6,0	./.	1/1:0,2:2:3.01:42,3,0	./.	1/1:0,5:3:9.03:121,9,0	./.	./.	1/1:2,7:6:8.94:82,9,0	./.	1/1:0,7:2:3.01:34,3,0	1/1:0,7:6:12.04:168,12,0	1/1:0,9:8:15.05:203,15,0	1/1:0,1:1:3.01:37,3,0
chr10	45198963	.	GA	G	1058.73	PASS	AB=0.950;AC=22;AF=0.917;AN=24;BaseQRankSum=-0.791;DP=116;FS=4.437;HRun=1;HaplotypeScore=31.1671;InbreedingCoeff=-0.1710;MQ=65.92;MQ0=3;MQRankSum=-2.598;QD=15.57;ReadPosRankSum=2.055;VQSLOD=3.5842;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/1:8,1:5:23.61:24,0,137	0/1:3,0:2:6.35:35,0,6	./.	./.	1/1:0,3:3:9.03:126,9,0	1/1:0,5:4:9.03:126,9,0	./.	1/1:0,5:5:12.04:167,12,0	1/1:0,6:5:2:40,2,0	./.	1/1:0,2:1:3.01:42,3,0	1/1:0,6:5:6.02:84,6,0	./.	./.	./.	./.	./.	1/1:0,7:4:6.02:84,6,0	./.	./.	1/1:0,8:5:6.02:84,6,0	./.	./.	1/1:0,7:7:15.05:209,15,0	1/1:0,7:6:9.03:125,9,0	./.
chr10	45198987	.	TA	T	1243.53	PASS	AB=0.813;AC=31;AF=0.969;AN=32;BaseQRankSum=1.459;DP=152;FS=3.757;HRun=1;HaplotypeScore=25.0789;InbreedingCoeff=-0.1466;MQ=46.08;MQ0=4;MQRankSum=-1.641;QD=11.30;ReadPosRankSum=-0.091;VQSLOD=1.5641;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	1/1:0,7:4:6.02:84,6,0	0/1:10,3:3:32.82:33,0,42	./.	1/1:0,13:9:5.98:62,6,0	./.	1/1:0,1:1:2.97:20,3,0	./.	./.	1/1:0,6:3:6.02:83,6,0	1/1:0,7:6:8.51:48,9,0	1/1:0,8:5:6.02:84,6,0	1/1:0,2:2:3.01:42,3,0	1/1:0,6:5:3.01:42,3,0	./.	1/1:0,7:6:6.02:84,6,0	1/1:0,3:2:3.01:42,3,0	./.	1/1:0,3:3:9.03:126,9,0	1/1:1,8:7:5.93:40,6,0	./.	./.	1/1:0,7:4:5.98:58,6,0	./.	./.	1/1:0,12:11:30.10:418,30,0	1/1:1,5:5:6:65,6,0	./.
chr10	45198996	.	TA	T	1572.30	PASS	AB=1.000;AC=31;AF=0.969;AN=32;BaseQRankSum=0.141;DP=167;FS=8.424;HRun=1;HaplotypeScore=27.4679;InbreedingCoeff=-0.1324;MQ=48.57;MQ0=7;MQRankSum=-2.338;QD=13.10;ReadPosRankSum=1.775;VQSLOD=1.9006;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,6:4:3.01:42,3,0	1/1:0,7:5:6.02:83,6,0	0/1:13,0:4:21.94:22,0,25	./.	1/1:0,14:10:9.03:125,9,0	./.	./.	./.	./.	1/1:1,5:3:9:105,9,0	1/1:1,7:7:12.03:150,12,0	1/1:1,6:4:6.02:83,6,0	1/1:0,2:2:3:42,3,0	1/1:0,5:4:3.01:42,3,0	./.	1/1:0,7:6:6.02:83,6,0	1/1:0,3:2:3.01:42,3,0	./.	1/1:0,4:4:12.04:168,12,0	1/1:2,10:10:9.03:116,9,0	./.	./.	1/1:0,6:3:3.01:42,3,0	./.	./.	1/1:0,11:10:30.10:416,30,0	1/1:0,8:7:8.86:97,9,0	./.
chr10	45199002	.	TA	T	2256.27	PASS	AC=38;AF=0.950;AN=40;BaseQRankSum=-1.964;DP=208;FS=2.954;HRun=1;HaplotypeScore=28.7291;InbreedingCoeff=0.2111;MQ=42.19;MQ0=17;MQRankSum=-2.410;QD=14.01;ReadPosRankSum=-0.101;VQSLOD=2.6095;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,6:4:3.01:42,3,0	1/1:1,7:6:6.02:83,6,0	0/0:20,0:3:5.99:0,6,51	./.	1/1:0,16:12:12.04:166,12,0	1/1:0,6:6:3.01:42,3,0	1/1:0,3:3:9.03:125,9,0	./.	./.	1/1:1,5:2:6.02:84,6,0	1/1:0,11:10:18.01:218,18,0	1/1:0,10:8:12.04:167,12,0	1/1:0,4:4:6.02:83,6,0	1/1:1,5:5:3.01:42,3,0	./.	1/1:0,8:7:9.03:125,9,0	1/1:0,3:2:3.01:42,3,0	./.	1/1:0,4:4:12.04:168,12,0	1/1:1,15:14:18.06:241,18,0	./.	1/1:1,16:11:5.98:62,6,0	1/1:0,8:5:3.01:42,3,0	./.	1/1:1,7:3:2.97:20,3,0	1/1:1,12:12:36.09:480,36,0	1/1:0,8:7:9.03:118,9,0	./.
chr10	45199690	.	GC	G	1087.88	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-0.661;DP=709;FS=1.418;HRun=2;HaplotypeScore=94.8042;InbreedingCoeff=0.9976;MQ=87.21;MQ0=0;MQRankSum=-2.984;QD=32.97;ReadPosRankSum=-3.328;VQSLOD=2.5214;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,135,1973	0/0:10,0:10:27.09:0,27,405	0/0:21,0:22:60.16:0,60,841	0/0:28,0:28:75.67:0,76,1089	0/0:27,0:27:75.24:0,75,1103	0/0:23,0:23:69.23:0,69,1033	0/0:27,0:27:81.26:0,81,1190	1/1:0,33:33:93.29:1183,93,0	0/0:26,0:26:78.25:0,78,1140	0/0:34,0:34:93.30:0,93,1359	0/0:12,0:12:33.11:0,33,495	0/0:24,0:24:68.92:0,69,1030	0/0:37,0:37:99:0,111,1654	0/0:30,0:30:90.30:0,90,1346	0/0:28,0:28:81.25:0,81,1174	0/0:23,0:23:69.23:0,69,1034	0/0:27,0:27:81.25:0,81,1191	0/0:12,0:12:36.12:0,36,540	0/0:18,0:18:54.16:0,54,754	0/0:28,0:28:80.91:0,81,1189	0/0:34,0:34:99:0,99,1375	0/0:15,0:15:44.36:0,44,627	0/0:23,0:23:66.17:0,66,917	0/0:36,0:36:99:0,102,1507	0/0:25,0:25:69.19:0,69,1006	0/0:26,0:26:78.25:0,78,1149	0/0:26,0:26:75.25:0,75,1121	0/0:9,0:9:27.09:0,27,401
chr10	45200048	.	CAGA	C	1639.79	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.113;DP=784;FS=6.223;HRun=0;HaplotypeScore=112.8954;InbreedingCoeff=0.9937;MQ=87.72;MQ0=0;MQRankSum=-1.533;QD=39.04;ReadPosRankSum=-3.977;VQSLOD=3.0065;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,129,2913	1/1:1,8:9:21.07:358,21,0	0/0:38,0:38:99:0,105,2168	0/0:27,0:27:78.06:0,78,1564	0/0:29,0:29:87.26:0,87,1956	0/0:18,0:18:54.17:0,54,1201	0/0:30,0:30:90.31:0,90,2036	1/1:3,30:33:90.24:1403,90,0	0/0:35,0:35:99:0,102,2314	0/0:39,0:39:99:0,114,2451	0/0:19,0:19:57.19:0,57,1272	0/0:38,0:38:99:0,114,2627	0/0:26,0:26:78.27:0,78,1765	0/0:26,0:26:75.24:0,75,1649	0/0:35,0:35:99:0,99,2230	0/0:24,0:24:69.23:0,69,1547	0/0:25,0:25:72.23:0,72,1595	0/0:6,0:6:18.06:0,18,415	0/0:21,0:21:60.21:0,60,1384	0/0:27,0:27:81.27:0,81,1772	0/0:43,0:43:99:0,129,2818	0/0:32,0:32:93.31:0,93,2066	0/0:32,0:32:96.33:0,96,2196	0/0:32,0:32:96.33:0,96,2171	0/0:23,0:23:69.21:0,69,1505	0/0:28,0:28:81.28:0,81,1868	0/0:34,0:34:99:0,102,2306	0/0:12,0:12:36.11:0,36,785
chr10	45201860	.	C	CAAACA	12456.15	PASS	AB=0.922;AC=25;AF=0.446;AN=56;BaseQRankSum=-2.434;DP=703;FS=9.581;HRun=0;HaplotypeScore=169.6100;InbreedingCoeff=0.8025;MQ=64.35;MQ0=4;MQRankSum=-11.756;QD=38.09;ReadPosRankSum=-4.631;VQSLOD=3.1638;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:25,14:37:72.18:1729,72,0	1/1:15,0:15:39.03:662,39,0	0/1:29,0:23:3.27:3,0,96	0/0:42,0:28:13.56:0,14,354	0/0:27,0:27:51.16:0,51,905	1/1:12,13:25:51.17:1346,51,0	1/1:21,9:30:60.16:1362,60,0	1/1:29,1:30:57.16:1116,57,0	0/1:9,4:13:32.04:446,0,32	0/0:31,0:31:51.17:0,51,892	0/0:21,0:21:39.11:0,39,677	1/1:20,8:27:45.13:1078,45,0	1/1:11,6:17:33.09:795,33,0	1/1:14,7:21:48.16:1118,48,0	0/0:27,0:27:57.19:0,57,1028	0/1:26,0:26:59.19:59,0,828	0/0:26,0:28:66.22:0,66,1160	0/0:17,0:17:36.12:0,36,642	0/0:27,0:27:57.19:0,57,987	0/0:22,0:22:51.17:0,51,897	0/0:21,0:21:33.11:0,33,601	1/1:9,9:18:42.13:975,42,0	1/1:11,9:20:39.12:934,39,0	1/1:11,4:16:37.01:833,37,0	0/0:22,0:22:48.15:0,48,852	0/0:32,0:32:45.71:0,46,1245	0/0:47,0:47:99:0,99,1740	0/0:11,0:11:24.08:0,24,448
chr10	45201879	.	CA	C	2491.33	PASS	AB=0.898;AC=13;AF=0.232;AN=56;BaseQRankSum=11.119;DP=742;FS=5.896;HRun=5;HaplotypeScore=162.9106;InbreedingCoeff=-0.1596;MQ=63.72;MQ0=7;MQRankSum=-10.309;QD=9.03;ReadPosRankSum=3.717;VQSLOD=0.4266;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:31,6:35:22.15:335,0,22	0/1:14,4:18:11.76:158,0,12	0/0:28,0:16:10:0,10,247	0/0:57,1:35:58.84:0,59,782	0/0:27,0:27:68.26:0,68,491	0/1:22,1:23:40.38:256,0,40	0/1:23,4:27:57.99:304,0,58	0/1:37,3:40:99:302,0,404	0/1:15,1:16:89.92:90,0,146	0/0:39,0:39:99:0,110,1017	0/0:23,0:23:57.97:0,58,420	1/1:17,3:19:2.76:262,3,0	0/1:11,2:13:16.65:152,0,17	0/1:20,3:23:93.15:233,0,93	0/0:24,0:24:65.64:0,66,532	0/0:28,0:27:2.10:0,2,434	0/0:27,0:27:74.89:0,75,1023	0/0:21,0:20:52.51:0,53,396	0/0:38,0:37:95.29:0,95,862	0/0:29,0:29:80.13:0,80,609	0/0:18,0:18:47.09:0,47,349	0/1:17,1:18:34.43:225,0,34	0/1:24,1:25:99:187,0,149	0/1:13,3:16:18.90:141,0,19	0/0:24,0:24:68.13:0,68,517	0/0:32,0:32:89.08:0,89,747	0/0:38,0:38:99:0,103,762	0/0:11,0:11:31.79:0,32,203
chr10	45201880	.	A	AAAAC	8197.52	PASS	AB=0.973;AC=15;AF=0.268;AN=56;BaseQRankSum=0.754;DP=746;FS=5.138;HRun=0;HaplotypeScore=183.8557;InbreedingCoeff=-0.0206;MQ=63.72;MQ0=7;MQRankSum=-11.300;QD=26.88;ReadPosRankSum=3.224;VQSLOD=4.3340;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:37,0:35:18.75:1085,0,19	0/1:12,6:18:8.07:715,0,8	0/0:28,0:16:22.59:0,23,310	0/0:60,0:35:33.88:0,34,819	0/0:25,0:25:68.85:0,69,1035	0/1:23,0:22:39.83:987,0,40	0/1:28,0:28:57.89:823,0,58	0/1:40,0:40:99:353,0,384	0/1:15,0:15:99:344,0,162	0/0:41,0:41:99:0,110,1403	0/0:22,0:22:58.35:0,58,795	1/1:20,0:19:6.17:827,6,0	1/1:14,0:14:3.93:545,4,0	0/1:22,1:23:91.96:784,0,92	0/0:24,0:24:66.13:0,66,1127	0/1:28,0:27:3.91:4,0,933	0/0:27,0:27:81.27:0,81,1378	0/0:22,0:21:52.81:0,53,757	0/0:39,0:38:94.90:0,95,1263	0/0:29,0:29:83.12:0,83,1126	0/0:18,0:18:47.41:0,47,703	0/1:18,0:18:17.79:703,0,18	0/1:25,0:25:99:676,0,129	0/1:16,0:16:10.63:351,0,11	0/0:25,0:25:68.51:0,69,1023	0/0:32,0:32:89.62:0,90,1440	0/0:38,0:38:99:0,111,1841	0/0:11,0:11:33.02:0,33,518
chr10	45201885	.	CA	C	13644.04	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-1.183;DP=733;FS=6.169;HRun=8;HaplotypeScore=127.4643;InbreedingCoeff=0.9865;MQ=65.38;MQ0=7;MQRankSum=-2.462;QD=22.01;ReadPosRankSum=5.949;VQSLOD=3.5399;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,28:33:60.24:621,60,0	1/1:11,7:18:17.11:265,17,0	0/0:28,0:17:13.05:0,13,321	0/0:57,0:36:64.70:0,65,735	1/1:2,21:23:63.10:608,63,0	1/1:2,21:23:52.99:500,53,0	1/1:5,20:25:56.69:495,57,0	1/1:13,28:41:57.52:790,58,0	1/1:2,14:16:38.76:357,39,0	1/1:3,37:40:99:1042,108,0	1/1:1,20:21:51.07:492,51,0	1/1:5,13:17:35.65:306,36,0	1/1:2,12:14:26.38:240,26,0	1/1:6,18:24:51.55:453,52,0	1/1:3,22:25:57.09:550,57,0	1/1:4,23:26:53.33:545,53,0	0/0:27,0:27:72.22:0,72,868	1/1:4,16:19:45.07:435,45,0	1/1:6,34:39:92.79:869,93,0	1/1:3,26:29:72.11:694,72,0	1/1:1,18:19:45.07:435,45,0	1/1:3,16:19:44.90:378,45,0	1/1:5,20:25:50.26:556,50,0	1/1:5,11:16:26.33:241,26,0	1/1:1,23:24:69.11:666,69,0	1/1:2,29:31:87.11:832,87,0	1/1:2,33:35:99:956,99,0	1/1:0,12:12:33.05:319,33,0
chr10	45201886	.	A	AAAACAAAAAC	7634.73	PASS	AB=1.000;AC=33;AF=0.589;AN=56;BaseQRankSum=3.664;DP=734;FS=6.845;HRun=0;HaplotypeScore=271.8689;InbreedingCoeff=0.0966;MQ=66.00;MQ0=7;MQRankSum=-7.105;QD=13.49;ReadPosRankSum=-7.299;VQSLOD=1.2762;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:37,0:35:43.78:837,44,0	1/1:11,6:17:32.01:1217,32,0	0/1:28,0:17:0.79:1,0,332	0/0:59,0:37:56.59:0,57,988	0/0:23,0:23:21.89:0,22,992	1/1:24,0:23:32:662,32,0	1/1:25,0:25:35.17:593,35,0	1/1:39,0:39:11.88:440,12,0	0/1:16,0:16:65.20:195,0,65	0/1:40,0:40:99:260,0,832	0/1:21,0:21:42.94:43,0,622	1/1:18,0:17:32.47:486,32,0	1/1:14,0:14:29.77:382,30,0	1/1:24,0:24:19.31:519,19,0	0/0:25,0:25:31.84:0,32,1082	0/1:26,0:25:28.91:29,0,926	0/0:26,0:26:75.24:0,75,2100	0/1:20,0:19:70.18:70,0,633	0/1:41,0:40:99:263,0,777	0/1:27,0:27:99:129,0,807	0/1:19,0:19:99:100,0,623	0/1:20,0:20:4.08:408,0,4	1/1:26,0:26:46.04:650,46,0	1/1:16,0:16:21.86:296,22,0	0/1:24,0:24:23.41:23,0,918	0/1:32,0:32:5.70:6,0,1210	0/0:35,0:35:7.21:0,7,1806	0/1:12,0:12:26.04:26,0,502
chr10	45202336	.	C	CA	6804.04	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-16.006;DP=724;FS=1.433;HRun=3;HaplotypeScore=67.0369;InbreedingCoeff=1.0000;MQ=96.09;MQ0=0;MQRankSum=-3.888;QD=37.59;ReadPosRankSum=0.345;VQSLOD=5.1831;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,135,1593	0/0:16,0:16:48.15:0,48,575	0/0:33,0:33:89.72:0,90,1026	0/0:36,0:36:99:0,105,1178	1/1:0,27:27:81.23:1112,81,0	0/0:20,0:20:54.16:0,54,648	0/0:25,0:25:66.15:0,66,756	0/0:32,0:32:75.22:0,75,892	0/0:21,0:21:60.18:0,60,720	0/0:23,0:23:66.20:0,66,784	0/0:21,0:21:57.17:0,57,683	0/0:29,0:29:84.26:0,84,1008	0/0:18,0:18:51.16:0,51,612	0/0:19,0:19:57.16:0,57,673	0/0:30,0:30:84.24:0,84,996	0/0:22,0:22:63.16:0,63,724	0/0:28,0:28:81.24:0,81,961	0/0:25,0:25:72.22:0,72,860	1/1:1,29:30:87.29:1217,87,0	1/1:2,22:24:57.19:798,57,0	1/1:3,29:32:75.25:1050,75,0	0/0:33,0:33:96.28:0,96,1140	0/0:22,0:22:57.17:0,57,683	0/0:28,0:27:81.23:0,81,960	0/0:16,0:16:45.14:0,45,540	1/1:1,22:23:66.20:905,66,0	1/1:2,22:23:60.20:840,60,0	1/1:0,21:21:63.21:882,63,0
chr10	45202701	.	CT	C	3762.88	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=11.281;DP=631;FS=1.136;HRun=9;HaplotypeScore=63.0078;InbreedingCoeff=0.9549;MQ=71.91;MQ0=0;MQRankSum=-0.305;QD=21.63;ReadPosRankSum=-0.788;VQSLOD=4.0825;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,114,1280	1/1:1,13:14:39.02:357,39,0	0/0:17,1:17:11.88:0,12,359	0/0:9,0:9:15.59:0,16,116	0/0:29,0:29:72.20:0,72,822	0/0:32,1:33:59.79:0,60,942	0/0:16,0:16:42.12:0,42,485	1/1:7,27:34:77.98:702,78,0	0/0:22,0:22:60.18:0,60,687	1/1:2,25:27:72.01:653,72,0	1/1:3,17:20:48.02:439,48,0	0/0:31,0:31:75.22:0,75,865	0/0:17,0:17:42.12:0,42,483	0/0:16,0:16:41.84:0,42,450	1/1:2,18:20:42.02:384,42,0	1/1:2,16:18:1.40:267,1,0	0/0:38,0:38:99:0,102,1176	1/1:1,19:20:54.03:494,54,0	0/0:19,0:19:51.14:0,51,579	0/0:24,0:24:66.17:0,66,742	0/0:14,0:14:42.12:0,42,484	0/0:18,0:18:54.15:0,54,614	0/0:17,0:17:48.14:0,48,550	0/0:26,0:26:72.21:0,72,831	1/1:2,19:21:51.03:467,51,0	0/0:27,0:27:41.72:0,42,717	0/0:24,0:24:66.20:0,66,761	0/0:16,0:16:33.09:0,33,380
chr10	45202922	.	TGGC	T	5953.27	PASS	AB=0.514;AC=11;AF=0.196;AN=56;BaseQRankSum=15.605;DP=586;FS=4.758;HRun=0;HaplotypeScore=106.6040;InbreedingCoeff=0.8867;MQ=87.52;MQ0=0;MQRankSum=-3.406;QD=50.45;ReadPosRankSum=5.503;VQSLOD=6.8751;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,102,2406	0/0:7,0:7:21.04:0,21,464	0/0:26,0:26:75.24:0,75,1601	0/0:20,0:20:60.18:0,60,1329	0/0:20,0:20:57.14:0,57,1276	0/0:20,0:20:60.19:0,60,1430	0/0:20,0:20:60.21:0,60,1384	0/0:28,0:28:84.26:0,84,1838	0/0:23,0:23:69.22:0,69,1647	1/1:1,21:22:63.22:1147,63,0	1/1:0,16:16:48.16:891,48,0	0/0:16,0:16:48.15:0,48,1112	0/0:13,0:13:39.10:0,39,862	0/0:17,0:17:51.10:0,51,1098	1/1:0,24:24:63.22:1173,63,0	0/1:1,17:18:22.76:842,0,23	0/0:33,0:33:99:0,99,2277	1/1:0,21:21:57.20:1062,57,0	0/0:16,0:16:48.16:0,48,1076	0/0:20,0:20:60.21:0,60,1428	0/0:22,0:22:66.21:0,66,1551	0/0:19,0:19:57.20:0,57,1287	0/0:20,0:20:60.17:0,60,1336	0/0:25,0:25:75.26:0,75,1800	1/1:0,17:17:45.15:838,45,0	0/0:28,0:28:84.28:0,84,1984	0/0:25,0:25:72.22:0,72,1666	0/0:15,0:15:45.15:0,45,1108
chr10	45203107	.	GCAGCGGGGCTTA	G	7826.58	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=12.955;DP=535;FS=11.227;HRun=0;HaplotypeScore=194.9044;InbreedingCoeff=0.9777;MQ=77.03;MQ0=0;MQRankSum=-11.694;QD=85.07;ReadPosRankSum=0.162;VQSLOD=3.5382;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,138,7370	0/0:3,0:3:9.03:0,9,564	0/0:10,0:10:27.09:0,27,1016	0/0:15,0:15:42.11:0,42,1667	1/1:1,18:19:45.15:1657,45,0	0/0:22,0:22:63.22:0,63,3381	0/0:18,0:18:51.18:0,51,3130	0/0:33,0:33:93.29:0,93,4548	0/0:23,0:23:66.23:0,66,3898	0/0:23,0:23:63.20:0,63,3123	0/0:14,0:14:36.12:0,36,1884	0/0:16,0:16:48.15:0,48,2719	0/0:19,0:19:54.19:0,54,3161	0/0:20,0:20:57.18:0,57,3205	0/0:22,0:22:63.22:0,63,3669	0/0:11,0:11:33.11:0,33,1884	0/0:44,0:44:99:0,129,7631	0/0:24,0:24:66.23:0,66,3939	1/1:1,16:17:48.16:1500,48,0	1/1:1,16:17:48.16:1791,48,0	1/1:2,11:13:15.05:571,15,0	0/0:17,0:17:51.14:0,51,2347	0/0:17,0:17:39.12:0,39,2030	0/0:29,0:29:87.30:0,87,5341	0/0:15,0:15:42.13:0,42,2035	1/1:2,12:14:36.12:1307,36,0	1/1:2,5:7:15.05:538,15,0	1/1:0,5:5:12.04:463,12,0
chr10	45203503	.	TGCTTAGGG	T	722.78	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.522;DP=569;FS=16.530;HRun=0;HaplotypeScore=139.9722;InbreedingCoeff=0.9867;MQ=76.66;MQ0=0;MQRankSum=-1.384;QD=38.04;ReadPosRankSum=-1.296;VQSLOD=2.3221;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,120,4448	0/0:9,0:9:24.08:0,24,973	0/0:20,0:19:45.13:0,45,1392	0/0:17,0:18:36.12:0,36,1256	0/0:24,0:24:60.17:0,60,2124	0/0:21,0:21:54.17:0,54,1965	0/0:27,0:27:72.22:0,72,2662	1/1:6,13:19:39.06:818,39,0	0/0:12,0:12:33.11:0,33,1396	0/0:20,0:20:51.18:0,51,2082	0/0:10,0:10:21.07:0,21,863	0/0:12,0:12:27.09:0,27,1063	0/0:17,0:17:51.18:0,51,2074	0/0:22,0:22:60.17:0,60,2143	0/0:23,0:23:51.18:0,51,1948	0/0:14,0:14:30.10:0,30,1221	0/0:46,0:46:99:0,105,4184	0/0:20,0:20:45.15:0,45,1819	0/0:18,0:18:42.14:0,42,1680	0/0:17,0:17:45.15:0,45,1676	0/0:30,0:30:63.17:0,63,2433	0/0:14,0:14:27.09:0,27,1115	0/0:15,0:15:42.14:0,42,1692	0/0:23,0:23:51.16:0,51,2049	0/0:14,0:14:33.10:0,33,1296	0/0:25,0:25:69.09:0,69,2676	0/0:21,0:21:51.15:0,51,1900	0/0:10,0:10:21.05:0,21,733
chr10	45204350	.	AG	A	1460.78	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.791;DP=537;FS=2.070;HRun=2;HaplotypeScore=48.7799;InbreedingCoeff=0.9889;MQ=71.57;MQ0=0;MQRankSum=-0.065;QD=33.20;ReadPosRankSum=-3.293;VQSLOD=2.3902;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:69.23:0,69,1021	1/1:0,9:9:24.08:312,24,0	0/0:7,0:7:21.07:0,21,310	0/0:7,0:7:18.06:0,18,257	0/0:25,0:25:72.24:0,72,1077	0/0:25,0:25:72.24:0,72,1077	0/0:21,0:21:57.19:0,57,853	1/1:2,33:35:99:1270,99,0	0/0:18,0:18:54.18:0,54,809	0/0:22,0:22:66.22:0,66,988	0/0:26,0:26:78.25:0,78,1149	0/0:15,0:15:45.15:0,45,674	0/0:8,0:8:24.08:0,24,359	0/0:11,0:11:33.06:0,33,450	0/0:19,0:19:57.19:0,57,853	0/0:8,0:8:21.07:0,21,314	0/0:20,0:20:57.18:0,57,835	0/0:18,0:18:51.17:0,51,754	0/0:21,0:21:60.20:0,60,895	0/0:29,0:29:87.28:0,87,1282	0/0:15,0:15:45.15:0,45,675	0/0:10,0:10:27.08:0,27,385	0/0:19,0:19:57.19:0,57,850	0/0:11,0:11:33.11:0,33,495	0/0:29,0:29:84.28:0,84,1259	0/0:32,0:32:90.30:0,90,1347	0/0:27,0:27:81.27:0,81,1211	0/0:27,0:27:81.27:0,81,1213
chr10	45205235	.	A	AT	7181.22	PASS	AB=0.958;AC=30;AF=0.536;AN=56;BaseQRankSum=-13.117;DP=599;FS=6.302;HRun=10;HaplotypeScore=60.0368;InbreedingCoeff=0.8962;MQ=77.22;MQ0=0;MQRankSum=0.187;QD=21.25;ReadPosRankSum=-0.572;VQSLOD=5.5775;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:39:99:0,104,839	0/1:10,1:11:2.07:2,0,186	0/1:17,0:15:2.58:3,0,92	0/0:12,0:12:8.89:0,9,69	1/1:6,24:31:50.37:718,50,0	0/0:17,0:17:50.94:0,51,419	0/0:16,0:17:46.97:0,47,375	1/1:6,18:24:54.09:557,54,0	0/0:24,0:24:62.90:0,63,517	1/1:3,18:21:29.58:519,30,0	1/1:2,17:20:50.99:508,51,0	0/0:25,0:25:53.88:0,54,441	0/0:18,0:18:44.91:0,45,366	0/0:16,0:17:40.96:0,41,326	1/1:7,19:26:26.49:487,26,0	1/1:5,16:21:17.46:391,17,0	0/0:29,0:29:74.88:0,75,612	1/1:3,15:19:50.96:514,51,0	1/1:5,13:18:17.46:390,17,0	1/1:5,21:26:32.51:526,33,0	1/1:4,14:18:14.46:359,14,0	0/0:22,1:25:32:0,32,446	0/0:16,0:16:41.94:0,42,345	0/0:22,0:22:47.85:0,48,386	1/1:2,23:25:60.15:640,60,0	1/1:3,26:29:73.38:748,73,0	1/1:3,13:17:39.10:415,39,0	1/1:0,15:15:39.05:402,39,0
chr10	45205928	.	CT	C	13050.88	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=1.349;DP=483;FS=7.217;HRun=1;HaplotypeScore=61.8369;InbreedingCoeff=0.9919;MQ=84.60;MQ0=0;MQRankSum=-7.596;QD=32.15;ReadPosRankSum=-1.421;VQSLOD=3.5829;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,24:31:84.06:1029,84,0	1/1:0,7:7:18.06:252,18,0	0/0:20,0:20:57.17:0,57,857	0/0:18,0:18:48.08:0,48,683	1/1:5,6:11:32.88:349,33,0	1/1:7,9:16:44.84:474,45,0	1/1:0,17:17:45.11:606,45,0	1/1:0,18:18:51.12:632,51,0	1/1:0,14:14:42.10:562,42,0	1/1:9,10:19:46.31:538,46,0	1/1:6,9:15:38.61:382,39,0	1/1:0,13:13:33.11:460,33,0	1/1:0,11:11:24.08:329,24,0	1/1:0,21:21:57.19:795,57,0	1/1:0,21:21:60.16:815,60,0	1/1:0,18:18:45.12:606,45,0	0/0:39,0:39:99:0,111,1728	1/1:0,16:16:45.15:621,45,0	1/1:6,14:20:53.98:670,54,0	1/1:5,5:10:23.43:250,23,0	1/1:0,26:26:42.12:587,42,0	1/1:0,16:16:27.09:376,27,0	1/1:8,4:12:32.84:310,33,0	1/1:0,19:19:48.16:670,48,0	1/1:4,11:15:39.86:455,40,0	1/1:6,7:13:36.01:410,36,0	1/1:0,17:17:45.15:623,45,0	1/1:0,10:10:18.06:250,18,0
chr10	45206003	.	G	GCCTGGCCAGTACCTCACTCAAGTGACA	27467.33	PASS	AB=0.667;AC=55;AF=0.982;AN=56;BaseQRankSum=-0.291;DP=179;FS=11.793;HRun=0;HaplotypeScore=206.1699;InbreedingCoeff=-0.0627;MQ=60.92;MQ0=0;MQRankSum=-1.606;QD=153.45;ReadPosRankSum=1.328;VQSLOD=3.5563;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,0:10:24.08:1598,24,0	1/1:2,0:2:6.02:641,6,0	1/1:2,0:3:3.48:138,3,0	0/1:3,1:6:10.36:762,0,10	1/1:3,0:3:3.01:287,3,0	1/1:4,0:4:9.03:491,9,0	1/1:5,0:5:15.05:787,15,0	1/1:5,0:5:15.04:742,15,0	1/1:6,0:6:15.05:993,15,0	1/1:9,0:9:24.08:2453,24,0	1/1:4,0:4:3.01:287,3,0	1/1:10,0:10:24.08:1615,24,0	1/1:7,0:7:18.06:1285,18,0	1/1:9,0:9:21.07:1364,21,0	1/1:9,0:9:18.06:943,18,0	1/1:5,0:5:15.05:1376,15,0	1/1:8,0:8:18.02:1246,18,0	1/1:5,0:5:11.86:707,12,0	1/1:9,0:9:24.07:1126,24,0	1/1:3,0:3:3.48:31,3,0	1/1:8,0:8:15.05:1612,15,0	1/1:9,0:9:18.02:1334,18,0	1/1:5,0:5:9.03:1036,9,0	1/1:4,0:4:3.01:354,3,0	1/1:7,0:7:13.24:802,13,0	1/1:8,0:8:21.53:1160,22,0	1/1:9,0:9:23.91:1739,24,0	1/1:7,0:7:21.05:558,21,0
chr10	45207408	.	G	GTT	6226.83	PASS	AB=0.687;AC=47;AF=0.839;AN=56;BaseQRankSum=-1.614;DP=548;FS=0.580;HRun=13;HaplotypeScore=102.5786;InbreedingCoeff=0.3321;MQ=69.02;MQ0=7;MQRankSum=-1.665;QD=13.31;ReadPosRankSum=-0.216;VQSLOD=3.7871;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:23,2:34:50.52:289,51,0	1/1:2,0:8:15.36:83,15,0	0/0:46,0:28:13.51:0,14,190	0/1:33,0:18:14.54:15,0,36	1/1:10,5:17:35.60:447,36,0	0/1:7,0:17:23.80:24,0,58	1/1:7,0:18:14.43:49,14,0	1/1:7,9:16:30.44:345,30,0	0/1:2,0:8:9.56:10,0,18	1/1:13,10:24:59.57:691,60,0	1/1:9,5:15:32.37:347,32,0	1/1:6,0:17:9.71:62,10,0	1/1:10,1:15:3.49:146,3,0	1/1:6,0:10:9.86:34,10,0	1/1:2,15:18:20.43:249,20,0	1/1:4,8:12:29.36:308,29,0	0/0:26,0:31:47.52:0,48,505	0/1:7,6:15:0.81:250,0,1	1/1:6,0:18:35.84:348,36,0	1/1:12,11:24:53.03:600,53,0	1/1:7,5:13:8.52:90,9,0	0/1:7,1:22:44.46:94,0,44	1/1:13,1:20:10.11:133,10,0	1/1:2,0:21:32.96:125,33,0	1/1:3,15:18:30.10:406,30,0	1/1:10,7:18:41.57:487,42,0	1/1:5,10:18:32.72:373,33,0	1/1:6,4:9:22.67:223,23,0
chr10	45208709	.	TG	T	2103.25	PASS	AB=0.907;AC=17;AF=0.315;AN=54;BaseQRankSum=-2.708;DP=512;FS=6.220;HRun=10;HaplotypeScore=77.1981;InbreedingCoeff=0.6997;MQ=87.85;MQ0=0;MQRankSum=-0.717;QD=9.18;ReadPosRankSum=5.933;VQSLOD=2.0353;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:28:14.44:0,14,83	0/0:0,0:3:2.88:0,3,15	0/0:20,0:20:18.55:0,19,209	0/0:32,0:32:52.13:0,52,464	0/0:6,0:11:6.68:0,7,35	0/0:0,0:8:5.68:0,6,28	0/0:21,0:36:46.51:0,47,355	1/1:11,0:35:46.83:137,47,0	0/0:7,0:14:8.84:0,9,72	1/1:6,15:21:47.92:404,48,0	1/1:2,8:11:28.98:232,29,0	0/0:13,0:19:20.14:0,20,121	0/0:6,0:14:11.43:0,11,77	0/0:9,0:15:20.37:0,20,144	1/1:8,15:24:44.02:370,44,0	1/1:5,16:21:44.97:391,45,0	0/1:39,4:43:0.14:0,0,603	1/1:3,13:17:41.03:344,41,0	0/0:8,0:13:26.33:0,26,162	0/0:4,0:4:0:0,0,0	0/1:19,1:36:2.69:3,0,115	0/0:13,1:16:20.71:0,21,158	0/1:4,1:5:17.04:17,0,46	0/0:9,0:16:14.41:0,14,116	1/1:2,14:16:44.99:390,45,0	0/0:11,1:13:14.58:0,15,91	0/0:6,0:14:9.03:0,9,44	./.
chr10	45210876	.	C	CT	488.22	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-6.640;DP=523;FS=0.000;HRun=9;HaplotypeScore=51.2437;InbreedingCoeff=0.8599;MQ=64.44;MQ0=3;MQRankSum=0.059;QD=17.44;ReadPosRankSum=1.620;VQSLOD=3.5827;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:50,1:51:99:0,105,1134	1/1:4,6:9:9.28:188,9,0	0/0:8,0:6:10.24:0,10,80	0/0:5,0:3:3:0,3,26	0/0:20,0:20:53.97:0,54,465	1/1:2,13:15:30.08:332,30,0	1/1:0,3:3:9.02:100,9,0	0/0:39,0:39:92.95:0,93,804	0/0:18,0:18:50.95:0,51,436	0/0:25,0:25:62.98:0,63,547	0/0:16,1:17:11.81:0,12,331	0/0:9,0:9:26.99:0,27,234	0/0:22,0:22:56.96:0,57,490	0/0:10,0:10:23.99:0,24,206	0/0:13,0:13:26.97:0,27,231	0/0:11,0:11:26.99:0,27,234	0/0:32,0:32:74.96:0,75,651	0/0:32,0:33:91.98:0,92,781	0/0:22,0:23:53.02:0,53,447	0/0:15,0:13:38.96:0,39,331	0/0:14,0:14:32.97:0,33,279	0/0:4,0:4:12:0,12,104	0/0:15,0:15:32.96:0,33,281	0/0:7,0:7:17.96:0,18,150	0/0:30,0:29:74.96:0,75,646	0/0:22,0:22:47.95:0,48,410	0/0:27,0:27:24.45:0,24,582	0/0:25,0:25:71.99:0,72,625
chr10	45211503	.	GGTGTGT	G	1654.06	PASS	AB=0.778;AC=38;AF=0.731;AN=52;BaseQRankSum=1.761;DP=562;FS=0.000;HRun=0;HaplotypeScore=126.0239;InbreedingCoeff=0.3361;MQ=68.66;MQ0=13;MQRankSum=-1.145;QD=4.06;ReadPosRankSum=0.444;VQSLOD=2.2183;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:26:9.03:125,9,0	0/0:4,0:7:6:0,6,114	0/0:39,0:25:0.47:0,0,1	0/0:34,0:24:2.97:0,3,10	1/1:15,4:19:5.93:40,6,0	1/1:15,4:18:9.97:182,10,0	1/1:13,5:18:9.03:180,9,0	./.	1/1:10,0:16:1.77:4,2,0	1/1:16,0:18:3.01:42,3,0	./.	1/1:17,0:17:6.48:69,6,0	0/0:8,0:14:1.86:0,2,33	1/1:18,0:18:4.41:35,4,0	0/1:19,0:27:15.61:191,0,16	1/1:16,0:24:12.04:167,12,0	0/0:15,0:17:5.72:0,6,183	0/1:18,0:24:31.23:36,0,31	1/1:14,3:17:8.99:141,9,0	1/1:18,5:23:5.94:41,6,0	1/1:31,0:30:9.41:80,9,0	0/0:11,0:11:2.04:0,2,23	1/1:16,0:17:1.75:4,2,0	1/1:15,0:24:2.65:5,3,0	1/1:10,0:18:12.04:167,12,0	1/1:17,1:18:2.52:59,3,0	1/1:10,4:14:9.03:162,9,0	1/1:9,5:13:3.01:60,3,0
chr10	45211836	.	G	GC	7088.57	PASS	AB=0.540;AC=13;AF=0.232;AN=56;BaseQRankSum=16.697;DP=672;FS=0.693;HRun=0;HaplotypeScore=81.3369;InbreedingCoeff=0.9002;MQ=85.84;MQ0=2;MQRankSum=-0.906;QD=42.45;ReadPosRankSum=1.001;VQSLOD=5.3051;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,138,1880	0/0:9,0:9:24.08:0,24,335	0/0:19,0:19:54.11:0,54,670	0/0:26,0:26:75.06:0,75,929	1/1:1,15:16:42.14:654,42,0	0/0:22,0:22:66.22:0,66,922	0/0:29,0:29:84.26:0,84,1156	0/0:26,0:26:78.23:0,78,1044	0/0:21,0:21:60.67:0,61,840	0/0:27,0:27:81.26:0,81,1118	0/0:17,0:17:45.11:0,45,612	0/0:25,0:25:72.24:0,72,1007	0/0:22,0:22:66.22:0,66,921	0/0:26,0:26:75.21:0,75,1023	0/0:29,0:29:81.27:0,81,1132	0/0:21,0:21:63.21:0,63,880	0/0:32,0:32:87.29:0,87,1212	0/0:31,0:31:93.31:0,93,1295	1/1:0,25:25:75.20:1124,75,0	1/1:0,20:21:63.21:997,63,0	1/1:3,47:48:99:2144,135,0	0/0:13,0:13:36.12:0,36,503	0/0:12,0:12:30.10:0,30,419	0/0:23,0:23:63.20:0,63,864	0/0:27,0:27:78.25:0,78,1074	0/1:4,23:27:8.68:1020,0,9	1/1:0,22:22:63.21:1006,63,0	1/1:0,6:5:9.03:144,9,0
chr10	45213757	.	GTGTA	G	5409.08	PASS	AB=0.932;AC=27;AF=0.500;AN=54;BaseQRankSum=-4.014;DP=910;FS=19.957;HRun=0;HaplotypeScore=331.5822;InbreedingCoeff=0.0200;MQ=59.87;MQ0=4;MQRankSum=3.322;QD=8.46;ReadPosRankSum=2.377;VQSLOD=2.2865;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:34,8:42:99:313,0,524	0/1:6,0:12:39.03:41,0,39	./.	0/0:31,0:24:5.85:0,6,53	0/0:29,0:29:3.88:0,4,27	0/1:11,0:17:6.71:73,0,7	0/1:24,0:28:23.26:23,0,66	0/1:49,0:49:13.84:14,0,102	1/1:22,12:35:42.09:587,42,0	0/1:46,0:46:12.99:13,0,626	0/1:25,0:25:22.92:23,0,185	1/1:20,17:37:57.18:872,57,0	1/1:18,21:39:64.23:1018,64,0	1/1:24,12:36:47.98:681,48,0	0/0:57,0:57:6.19:0,6,362	0/1:43,0:42:54.10:54,0,433	0/1:21,0:21:5.79:6,0,686	0/0:22,0:22:8.71:0,9,85	0/0:23,0:22:21.21:0,21,228	0/1:28,0:28:15.15:15,0,105	0/0:41,0:41:4.47:0,4,29	1/1:17,16:33:31.35:678,31,0	1/1:17,9:26:30.09:446,30,0	1/1:21,10:31:33.11:513,33,0	0/1:29,0:29:4.35:4,0,289	0/1:48,0:48:22.87:23,0,399	0/0:39,0:39:27.88:0,28,375	0/1:14,0:14:13.31:13,0,15
chr10	45213796	.	T	TATGTATGC	16589.75	PASS	AB=1.000;AC=38;AF=0.679;AN=56;BaseQRankSum=-12.305;DP=946;FS=2.074;HRun=0;HaplotypeScore=366.4238;InbreedingCoeff=0.0040;MQ=50.44;MQ0=6;MQRankSum=-2.424;QD=18.68;ReadPosRankSum=-7.519;VQSLOD=1.9934;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:41,0:41:99:296,0,559	0/1:13,0:13:45.04:75,0,45	0/0:22,0:2:5.70:0,6,29	0/0:20,0:6:11.56:0,12,89	1/1:29,0:29:20.93:339,21,0	0/1:27,0:27:99:341,0,100	0/1:34,0:34:75.70:431,0,76	1/1:40,0:50:99:1064,131,0	0/1:39,0:39:99:457,0,153	1/1:48,6:56:99:2508,117,0	1/1:20,3:25:44.97:510,45,0	0/1:51,0:51:99:540,0,349	0/1:45,0:45:99:380,0,341	0/1:41,0:41:99:462,0,220	1/1:43,9:55:99:1301,105,0	1/1:46,6:51:99:1747,111,0	0/0:16,0:16:25.10:0,25,677	1/1:11,1:12:21.27:250,21,0	1/1:24,0:23:51.31:606,51,0	1/1:24,0:24:21.89:227,22,0	0/1:39,0:39:1.75:157,0,2	0/1:40,0:40:99:353,0,216	0/1:28,0:28:99:288,0,157	0/1:29,0:28:93.70:315,0,94	1/1:32,3:35:25.67:934,26,0	1/1:46,1:47:99:1965,135,0	1/1:42,0:42:74.74:882,75,0	1/1:9,0:9:14.91:160,15,0
chr10	45214590	.	GTCT	G	391.45	PASS	AB=0.923;AC=14;AF=0.250;AN=56;BaseQRankSum=11.603;DP=476;FS=16.390;HRun=0;HaplotypeScore=112.6601;InbreedingCoeff=-0.3185;MQ=64.44;MQ0=12;MQRankSum=-6.567;QD=1.86;ReadPosRankSum=4.909;VQSLOD=0.6383;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:21.07:0,21,272	0/0:5,0:5:15.05:0,15,334	0/0:27,0:18:52.05:0,52,663	0/0:27,0:19:50.73:0,51,689	0/1:7,4:11:10.78:11,0,78	0/0:23,0:22:57.18:0,57,1142	0/0:28,0:28:69.22:0,69,1220	0/0:24,0:24:67.71:0,68,784	0/1:11,0:11:32.08:32,0,55	0/0:24,0:24:7.64:0,8,564	0/1:17,0:16:25.30:25,0,127	0/0:11,0:11:30.10:0,30,584	0/1:15,0:15:14.91:15,0,165	0/1:19,0:18:24.52:25,0,196	0/1:21,0:21:43.83:44,0,153	0/0:12,0:12:2.08:0,2,211	0/0:24,0:22:51.13:0,51,794	0/0:13,0:12:13.48:0,13,296	0/1:11,1:10:2.46:2,0,95	0/1:5,2:7:28.98:49,0,29	0/1:18,1:18:49.27:128,0,49	0/1:15,0:15:8.53:9,0,204	0/1:21,0:21:44.71:45,0,118	0/1:21,0:21:43.99:44,0,84	0/0:18,0:18:8.12:0,8,288	0/1:10,3:13:40.26:40,0,143	0/1:5,3:8:8.48:72,0,8	0/0:8,0:8:23.48:0,23,145
chr10	45214594	.	GTCTGTCTGT	G	517.67	PASS	AB=0.791;AC=6;AF=0.107;AN=56;BaseQRankSum=6.353;DP=467;FS=29.134;HRun=0;HaplotypeScore=156.7924;InbreedingCoeff=-0.1194;MQ=60.08;MQ0=13;MQRankSum=-3.666;QD=8.35;ReadPosRankSum=1.602;VQSLOD=1.2394;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:18.06:0,18,274	0/0:5,0:5:15.05:0,15,651	0/0:27,0:18:52.42:0,52,888	0/0:28,0:20:46.77:0,47,974	0/1:5,4:9:34.46:34,0,147	0/0:24,0:23:57.18:0,57,2148	0/0:25,0:25:63.20:0,63,2075	0/0:24,0:24:51.01:0,51,825	0/0:12,0:12:27.09:0,27,464	0/0:23,0:23:69.23:0,69,1301	0/0:16,0:15:33.11:0,33,624	0/0:11,0:11:33.10:0,33,1090	0/0:15,0:15:33.11:0,33,549	0/0:20,0:19:42.08:0,42,680	0/0:23,0:23:48.13:0,48,819	0/0:12,0:12:27.09:0,27,440	0/0:24,0:22:48.16:0,48,1517	0/0:14,0:13:33.10:0,33,559	0/1:12,1:10:43.52:44,0,192	0/1:3,2:5:49.63:117,0,50	0/1:16,1:16:46.81:47,0,139	0/0:15,0:15:33.11:0,33,544	0/0:22,0:22:42.14:0,42,724	0/0:21,0:21:35.21:0,35,621	0/0:17,0:17:30.10:0,30,535	0/1:9,3:12:99:165,0,259	0/1:3,3:6:21.39:236,0,21	0/0:5,0:5:15.04:0,15,166
chr10	45214649	.	C	CCCCAAGAGAAAGAGTCACAC	1386	PASS	AB=0.721;AC=14;AF=0.875;AN=16;BaseQRankSum=-1.898;DP=21;FS=14.880;HRun=0;HaplotypeScore=43.4832;MQ=161.26;MQ0=0;MQRankSum=1.342;QD=66.00;ReadPosRankSum=-1.157;VQSLOD=0.7789;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/1:5,0:8:51.59:811,0,52	0/1:3,1:5:19.70:410,0,20	./.	./.	1/1:2,0:2:6.02:100,6,0	1/1:1,0:1:3:28,3,0	./.	./.	./.	./.	./.	1/1:1,0:1:2.97:20,3,0	./.	./.	./.	./.	1/1:1,0:1:3.01:52,3,0	./.	./.	./.	1/1:1,0:1:3:25,3,0	1/1:2,0:2:2.97:20,3,0	./.	./.	./.	./.
chr10	45214903	.	T	TTCTCTCTCTC	4240.07	PASS	AB=0.925;AC=43;AF=0.860;AN=50;BaseQRankSum=-1.097;DP=495;FS=7.721;HRun=0;HaplotypeScore=171.6475;InbreedingCoeff=0.3271;MQ=61.52;MQ0=15;MQRankSum=-3.437;QD=11.01;ReadPosRankSum=-1.764;VQSLOD=2.7772;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:18:6.02:164,6,0	1/1:3,0:4:3.01:50,3,0	./.	./.	./.	1/1:12,0:12:2.78:89,3,0	1/1:20,0:18:9.03:313,9,0	0/0:18,0:19:5.99:0,6,79	1/1:14,2:14:11.73:475,12,0	1/1:17,0:17:9.03:305,9,0	1/1:19,0:19:3.01:44,3,0	1/1:21,1:23:15.05:458,15,0	1/1:17,0:16:17.98:447,18,0	1/1:21,2:22:12.04:408,12,0	1/1:14,0:13:3.01:71,3,0	1/1:21,0:20:6.02:235,6,0	0/1:26,0:31:33.37:33,0,641	1/1:9,0:8:9.03:307,9,0	1/1:13,0:13:3.81:19,4,0	0/1:14,0:14:0:0,0,0	1/1:20,0:20:3:26,3,0	0/1:18,0:18:0:0,0,0	1/1:13,0:14:3.01:127,3,0	1/1:17,1:19:18:432,18,0	1/1:13,0:12:10.92:66,11,0	0/0:19,0:23:12.51:0,13,269	1/1:13,0:14:6.01:75,6,0	1/1:5,0:6:9.86:95,10,0
chr10	45214953	.	A	ATGTG	1096.94	PASS	AB=0.865;AC=23;AF=0.442;AN=52;BaseQRankSum=-1.416;DP=514;FS=0.000;HRun=0;HaplotypeScore=108.8598;InbreedingCoeff=0.3287;MQ=42.02;MQ0=50;MQRankSum=-1.501;QD=5.48;ReadPosRankSum=-0.772;VQSLOD=2.2129;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:11,0:11:14.15:14,0,40	0/0:2,0:3:3:0,3,27	./.	./.	1/1:9,0:9:0.89:2,1,0	0/1:7,3:11:13.57:64,0,14	1/1:20,1:19:3.01:34,3,0	1/1:20,0:19:4.81:29,5,0	0/0:14,0:16:2.38:0,2,27	0/1:18,0:15:16.90:17,0,22	0/0:11,0:10:6.02:0,6,93	0/0:20,0:20:11.82:0,12,166	0/0:15,0:13:5.82:0,6,82	0/0:15,0:16:5.85:0,6,74	0/0:11,0:9:9.49:0,9,140	0/0:13,0:12:9.02:0,9,120	0/0:30,0:30:27.07:0,27,364	0/0:14,0:14:15.05:0,15,205	1/1:11,0:9:6.02:86,6,0	1/1:10,0:9:3.01:70,3,0	1/1:20,5:32:6.02:140,6,0	0/0:10,0:10:8.90:0,9,134	0/1:11,0:10:3.63:4,0,84	0/0:25,0:25:8.07:0,8,120	1/1:1,3:5:6.02:140,6,0	1/1:20,2:21:27.55:470,28,0	1/1:9,0:9:5.89:56,6,0	0/1:3,3:6:37.01:131,0,37
chr10	45216294	.	C	CGGGGAACCTACAAACTGTTCTCT	41616.54	PASS	AB=0.733;AC=55;AF=0.982;AN=56;BaseQRankSum=0.383;DP=271;FS=47.527;HRun=0;HaplotypeScore=285.2435;InbreedingCoeff=-0.0328;MQ=72.17;MQ0=0;MQRankSum=-3.189;QD=153.57;ReadPosRankSum=2.547;VQSLOD=2.8611;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:14:21.07:875,21,0	1/1:4,0:4:7.27:367,7,0	1/1:8,0:8:6.01:1379,6,0	0/1:7,2:11:63.67:1229,0,64	1/1:10,0:10:21.07:1462,21,0	1/1:12,0:12:27.09:1834,27,0	1/1:19,0:19:51.16:2847,51,0	1/1:15,0:15:36.11:2374,36,0	1/1:10,0:10:26.30:1935,26,0	1/1:10,0:10:21.96:2002,22,0	1/1:3,0:3:8.24:341,8,0	1/1:8,0:8:18.06:927,18,0	1/1:10,0:10:18.06:1283,18,0	1/1:10,0:10:21.07:1837,21,0	1/1:14,0:14:39.13:2512,39,0	1/1:14,0:14:30.10:2059,30,0	1/1:6,0:6:14.72:957,15,0	1/1:1,0:1:2.97:20,3,0	1/1:8,0:8:24.08:1559,24,0	1/1:10,0:10:27.09:1840,27,0	1/1:8,0:9:18.53:1094,19,0	1/1:9,0:9:21.07:1645,21,0	1/1:6,0:6:9.03:823,9,0	1/1:12,0:12:27.09:1175,27,0	1/1:7,0:7:15.05:1137,15,0	1/1:12,0:12:27.09:2049,27,0	1/1:11,0:11:30.06:2335,30,0	1/1:8,0:8:18.95:1718,19,0
chr10	45216295	.	G	GGGGAACCTACAAACTGTTCTCTG	2403	PASS	AB=0.875;AC=23;AF=0.958;AN=24;BaseQRankSum=-1.445;DP=35;FS=13.318;HRun=0;HaplotypeScore=42.8888;InbreedingCoeff=-0.0966;MQ=164.34;MQ0=0;MQRankSum=-1.742;QD=75.09;ReadPosRankSum=-0.704;VQSLOD=1.2840;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	1/1:1,0:1:3.01:65,3,0	1/1:2,1:8:6.01:1379,6,0	0/1:6,0:7:72.70:386,0,73	./.	./.	1/1:2,0:2:6.01:66,6,0	1/1:3,0:3:6.01:75,6,0	./.	1/1:1,0:1:0.89:2,1,0	./.	1/1:3,0:3:6.02:103,6,0	1/1:2,0:2:3.01:250,3,0	./.	./.	./.	1/1:1,0:1:2.98:22,3,0	1/1:1,0:1:2.97:20,3,0	./.	./.	1/1:2,0:2:3.01:96,3,0	./.	./.	./.	./.	./.	1/1:1,0:1:2.97:20,3,0	./.
chr10	45218698	.	T	TC	1863.94	PASS	AB=0.988;AC=29;AF=0.518;AN=56;BaseQRankSum=0.875;DP=408;FS=1.020;HRun=8;HaplotypeScore=64.8403;InbreedingCoeff=0.7409;MQ=86.74;MQ0=1;MQRankSum=-3.316;QD=10.02;ReadPosRankSum=2.468;VQSLOD=1.7289;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,1:10:8.65:62,9,0	0/0:7,0:7:21.01:0,21,191	0/1:25,1:23:17.59:18,0,191	0/1:39,0:33:17.58:18,0,297	0/0:19,0:19:45:0,45,405	0/0:20,0:20:51.03:0,51,465	0/0:25,0:26:62.04:0,62,549	0/0:26,0:26:54.02:0,54,494	1/1:3,0:3:5.68:32,6,0	1/1:3,7:10:21.06:242,21,0	1/1:2,9:11:21.06:242,21,0	1/1:4,0:4:8.77:54,9,0	1/1:5,0:4:4.67:27,5,0	1/1:8,0:8:9.55:54,10,0	1/1:2,20:22:42.12:480,42,0	1/1:4,15:19:29.88:331,30,0	0/0:15,0:15:36.01:0,36,329	1/1:1,3:4:9.03:104,9,0	0/0:12,0:12:24.01:0,24,218	0/0:22,0:22:51.02:0,51,465	0/0:23,0:23:29.71:0,30,437	0/1:3,0:3:0:0,0,0	1/1:3,0:3:2.96:19,3,0	1/1:4,1:6:13.14:85,13,0	1/1:2,11:13:27.08:304,27,0	0/0:21,0:22:50.04:0,50,445	0/0:18,0:18:41.98:0,42,374	0/0:12,0:12:36.02:0,36,329
chr10	45218703	.	C	CA	451.66	PASS	AB=0.955;AC=12;AF=0.214;AN=56;BaseQRankSum=8.814;DP=415;FS=0.000;HRun=0;HaplotypeScore=66.6519;InbreedingCoeff=0.4468;MQ=85.45;MQ0=1;MQRankSum=-0.133;QD=3.23;ReadPosRankSum=4.491;VQSLOD=2.6532;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:5.75:0,6,110	0/0:10,0:10:30.02:0,30,360	0/1:27,1:24:17.59:18,0,408	0/1:33,5:30:99:166,0,554	0/0:22,0:22:57.02:0,57,693	0/0:18,0:18:54.17:0,54,736	0/0:25,0:25:75.04:0,75,947	0/0:25,0:25:63.14:0,63,822	0/0:3,0:3:3.63:0,4,24	0/1:10,0:10:8.83:37,0,9	1/1:9,0:9:0.94:52,1,0	0/0:7,0:7:8.25:0,8,61	0/0:7,0:6:17.24:0,17,117	0/0:8,0:8:14.85:0,15,98	0/1:22,0:22:3.13:134,0,3	1/1:16,0:16:23.26:98,23,0	0/0:16,0:16:45.07:0,45,570	1/1:3,0:3:7.74:29,8,0	0/0:10,0:10:23.99:0,24,306	0/0:22,0:22:57.12:0,57,746	0/0:22,0:22:57.39:0,57,783	0/0:3,0:3:5.97:0,6,46	0/0:6,0:6:14.53:0,15,132	0/0:8,0:8:7.77:0,8,69	1/1:13,0:13:5.53:73,6,0	0/0:21,0:21:63.02:0,63,777	0/0:17,0:17:51.08:0,51,642	0/0:12,0:12:36.12:0,36,502
chr10	45219780	.	AT	A	755.13	PASS	AB=0.754;AC=23;AF=0.426;AN=54;BaseQRankSum=7.132;DP=234;FS=0.000;HRun=1;HaplotypeScore=77.7694;InbreedingCoeff=-0.2318;MQ=69.96;MQ0=2;MQRankSum=-6.475;QD=4.66;ReadPosRankSum=2.403;VQSLOD=0.3769;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:12,2:13:12.95:0,13,115	0/0:2,0:2:3.90:0,4,41	0/0:10,0:10:23.37:0,23,296	./.	0/1:3,3:6:15.84:16,0,30	0/1:6,7:13:19.91:108,0,20	0/0:2,0:2:5.52:0,6,27	0/0:17,0:16:14.60:0,15,148	0/1:8,2:10:11.80:12,0,50	0/1:6,6:12:24.09:73,0,24	0/1:5,5:10:21.84:46,0,22	0/1:4,3:7:2.49:59,0,2	0/1:5,2:7:19.38:19,0,28	1/1:2,4:6:6.12:60,6,0	0/1:3,2:5:4.98:44,0,5	0/1:7,1:8:15.73:56,0,16	0/0:9,0:9:27.09:0,27,387	0/1:16,4:20:59.41:59,0,97	0/0:17,0:17:17.69:0,18,143	1/1:2,2:4:1.76:51,2,0	0/1:4,0:4:3.04:21,0,3	0/1:3,0:3:0.48:0,0,4	1/1:1,3:4:1.66:39,2,0	0/1:3,1:4:7.11:7,0,26	0/1:5,5:10:27.26:48,0,27	0/1:8,4:12:40.52:41,0,46	0/1:4,6:10:30.75:76,0,31	0/1:2,5:7:0.87:69,0,1
chr10	45219782	.	AATAATAATAATAAT	A	6219.08	PASS	AB=0.714;AC=23;AF=0.426;AN=54;BaseQRankSum=11.440;DP=221;FS=1.820;HRun=0;HaplotypeScore=115.8026;InbreedingCoeff=-0.4290;MQ=68.61;MQ0=2;MQRankSum=-7.055;QD=38.15;ReadPosRankSum=7.833;VQSLOD=3.3718;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:11,2:12:50.67:51,0,85	0/0:2,0:2:6.02:0,6,131	0/0:9,0:9:0.79:0,1,164	./.	0/1:3,3:6:48.87:188,0,49	0/1:5,7:12:31.37:699,0,31	0/0:2,0:2:5.86:0,6,37	0/0:16,0:15:0.48:0,0,194	0/1:8,2:10:70.36:192,0,70	0/1:6,6:12:37.29:601,0,37	0/1:5,5:10:38.03:407,0,38	0/1:3,3:6:15.08:296,0,15	0/1:5,2:7:47.95:190,0,48	1/1:2,4:6:0.93:400,1,0	0/1:2,2:4:17.14:195,0,17	0/1:5,1:6:37.96:93,0,38	0/0:9,0:9:24.06:0,24,1343	0/1:14,4:18:99:345,0,157	0/0:16,0:16:34.68:0,35,223	0/1:1,2:3:5.62:198,0,6	1/1:3,0:3:2.50:9,2,0	0/0:3,0:3:2.56:0,3,13	0/1:1,3:4:2.62:297,0,3	0/1:3,1:4:36.83:92,0,37	0/1:5,5:10:44.40:459,0,44	0/1:8,4:12:66.62:397,0,67	0/1:4,5:10:34.65:596,0,35	1/1:2,5:7:5.03:514,5,0
chr10	45219792	.	AT	A	486.52	PASS	AB=0.939;AC=23;AF=0.442;AN=52;BaseQRankSum=9.440;DP=188;FS=3.468;HRun=1;HaplotypeScore=78.8711;InbreedingCoeff=-0.1808;MQ=45.17;MQ0=3;MQRankSum=-5.176;QD=3.63;ReadPosRankSum=3.630;VQSLOD=0.6347;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:9:27.07:0,27,345	0/0:3,0:3:6.49:0,6,86	1/1:2,0:1:2.68:11,3,0	./.	0/1:4,1:5:36.85:37,0,67	0/1:14,0:14:55.17:55,0,173	0/0:2,0:2:6.02:0,6,80	0/0:16,0:15:18.50:0,19,554	0/1:9,0:9:11.89:12,0,225	0/1:9,4:13:94.66:103,0,95	0/1:8,0:8:22.08:22,0,67	1/1:3,0:3:5.45:16,5,0	0/1:4,0:4:1.23:1,0,75	0/1:5,1:6:23.36:47,0,23	1/1:2,0:2:3.63:11,4,0	0/1:2,1:3:34.51:36,0,35	0/0:8,0:8:24.08:0,24,373	0/1:19,0:19:99:120,0,348	0/1:14,0:14:46.65:47,0,403	1/1:4,0:4:9.64:64,10,0	0/0:2,0:2:3.01:0,3,42	./.	1/1:3,0:3:5.45:16,5,0	0/0:4,0:4:2.26:0,2,79	0/1:8,0:8:13.81:14,0,109	0/0:9,0:9:0.66:0,1,190	0/1:10,0:10:12.72:13,0,106	0/1:7,0:7:11.95:12,0,69
chr10	45220212	.	A	AAAC	17975.09	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-10.889;DP=646;FS=5.144;HRun=0;HaplotypeScore=77.5184;InbreedingCoeff=0.9777;MQ=67.47;MQ0=0;MQRankSum=-0.225;QD=33.85;ReadPosRankSum=2.778;VQSLOD=5.3272;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:45:99:0,114,1548	0/0:5,0:5:15.05:0,15,216	0/0:20,0:14:11.05:0,11,142	0/0:16,0:15:26.24:0,26,295	1/1:3,21:26:60.12:1162,60,0	1/1:6,18:24:48.16:966,48,0	1/1:9,17:26:42.13:810,42,0	1/1:13,16:30:51.08:812,51,0	1/1:4,21:25:45.15:906,45,0	1/1:4,18:22:48.11:918,48,0	1/1:8,14:22:48.06:877,48,0	1/1:7,18:25:23.97:483,24,0	1/1:8,12:20:24.08:483,24,0	1/1:7,20:28:51.17:1005,51,0	1/1:8,20:28:48.16:938,48,0	1/1:8,23:32:44.82:848,45,0	0/0:29,0:29:69.19:0,69,939	1/1:2,12:14:30.10:603,30,0	1/1:8,18:31:68.90:887,69,0	1/1:7,11:18:24.03:442,24,0	1/1:7,13:21:30.10:604,30,0	1/1:4,9:13:24.08:458,24,0	1/1:2,19:21:42.14:816,42,0	1/1:2,21:24:48.16:955,48,0	1/1:4,19:24:39.13:785,39,0	1/1:5,15:20:45.13:829,45,0	1/1:6,24:30:57.19:1147,57,0	1/1:3,4:7:12.04:241,12,0
chr10	45220365	.	TTTTTA	T	3090.40	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=11.466;DP=498;FS=0.000;HRun=0;HaplotypeScore=95.2535;InbreedingCoeff=0.9610;MQ=69.20;MQ0=2;MQRankSum=-9.428;QD=27.11;ReadPosRankSum=0.572;VQSLOD=3.3603;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:54.18:0,54,1413	0/0:13,0:13:21.07:0,21,568	0/0:21,0:14:23.13:0,23,311	0/0:19,0:14:13.33:0,13,269	0/0:20,0:20:48.16:0,48,1339	0/0:19,0:19:51.17:0,51,1444	0/0:15,0:15:33.08:0,33,743	0/0:30,0:29:57.18:0,57,1435	0/0:14,0:14:42.14:0,42,1168	1/1:8,14:22:42.08:656,42,0	1/1:1,13:14:33.03:545,33,0	0/0:15,0:15:42.13:0,42,1051	0/0:11,0:11:24.08:0,24,643	0/0:21,0:21:51.16:0,51,1383	1/1:9,6:15:18.06:337,18,0	1/1:5,17:22:36.12:673,36,0	0/0:28,0:28:75.24:0,75,1975	1/1:7,16:23:27.09:505,27,0	0/0:33,0:33:78.24:0,78,2017	0/0:19,0:19:36.11:0,36,906	0/0:6,0:6:15.05:0,15,420	0/0:10,0:10:6.01:0,6,111	0/0:7,0:7:12.03:0,12,281	0/0:15,0:15:27.09:0,27,764	1/1:6,12:18:30.10:561,30,0	0/0:16,0:16:33.11:0,33,893	0/0:9,0:9:27.09:0,27,701	0/0:16,0:16:36.12:0,36,989
chr10	45222325	.	TCGGTTC	T	5627.64	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=12.180;DP=618;FS=2.786;HRun=0;HaplotypeScore=132.9500;InbreedingCoeff=0.9988;MQ=92.01;MQ0=0;MQRankSum=-13.122;QD=52.11;ReadPosRankSum=1.189;VQSLOD=4.6784;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:81.26:0,81,2771	0/0:10,0:10:30.10:0,30,1036	0/0:26,0:26:78.15:0,78,2495	0/0:32,0:31:84.25:0,84,2772	0/0:20,0:20:54.64:0,55,1828	0/0:18,0:18:51.18:0,51,1849	0/0:26,0:26:75.24:0,75,2615	0/0:35,0:35:96.23:0,96,3031	0/0:29,0:29:87.30:0,87,3129	1/1:4,19:23:55.74:1309,56,0	1/1:1,15:16:27.01:557,27,0	0/0:26,0:26:72.25:0,72,2541	0/0:25,0:25:75.26:0,75,2716	0/0:22,0:22:63.22:0,63,2217	1/1:3,19:22:42.14:1034,42,0	1/1:0,19:19:57.20:1402,57,0	0/0:33,0:33:99:0,99,3555	1/1:3,10:13:24.08:591,24,0	0/0:12,0:12:36.12:0,36,1155	0/0:10,0:10:27.09:0,27,880	0/0:37,0:37:99:0,108,3875	0/0:21,0:21:60.21:0,60,2096	0/0:13,0:13:30.10:0,30,1096	0/0:25,0:25:75.26:0,75,2692	1/1:3,12:15:30.10:737,30,0	0/0:23,0:23:66.23:0,66,2347	0/0:22,0:22:60.21:0,60,2099	0/0:18,0:18:54.19:0,54,1978
chr10	45223393	.	TGA	T	182.34	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.195;DP=734;FS=4.248;HRun=0;HaplotypeScore=93.0931;InbreedingCoeff=0.9910;MQ=87.20;MQ0=1;MQRankSum=0.463;QD=26.05;ReadPosRankSum=-2.407;VQSLOD=4.1452;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,150,2861	1/1:1,6:7:18.06:273,18,0	0/0:25,0:24:69.19:0,69,1190	0/0:35,0:35:59.67:0,60,1097	0/0:17,0:17:48.16:0,48,907	0/0:22,0:22:66.23:0,66,1274	0/0:30,0:30:90.28:0,90,1653	0/0:19,0:19:57.17:0,57,1055	0/0:31,0:31:90.29:0,90,1704	0/0:12,0:12:33.11:0,33,638	0/0:13,0:13:36.11:0,36,662	0/0:33,0:33:96.32:0,96,1821	0/0:40,0:40:99:0,120,2280	0/0:33,0:33:96.31:0,96,1806	0/0:24,0:24:72.25:0,72,1391	0/0:28,0:28:81.28:0,81,1565	0/0:27,0:27:75.26:0,75,1440	0/0:27,0:27:81.28:0,81,1544	0/0:22,0:22:66.22:0,66,1222	0/0:17,0:17:48.16:0,48,927	0/0:78,0:78:99:0,235,4453	0/0:22,0:22:66.23:0,66,1254	0/0:10,0:10:30.09:0,30,546	0/0:38,0:38:99:0,111,2106	0/0:15,0:15:45.15:0,45,856	0/0:30,0:30:90.31:0,90,1717	0/0:14,0:13:42.13:0,42,765	0/0:15,0:15:45.11:0,45,831
chr10	45226882	.	CGA	C	21308.72	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=11.415;DP=652;FS=0.000;HRun=0;HaplotypeScore=127.9561;InbreedingCoeff=0.9990;MQ=88.11;MQ0=1;MQRankSum=-8.861;QD=38.12;ReadPosRankSum=5.728;VQSLOD=6.4215;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,47:47:99:1696,117,0	0/0:11,0:11:33.11:0,33,617	0/0:28,0:29:77.60:0,78,1362	0/0:24,0:23:69.21:0,69,1219	1/1:1,17:18:42.14:617,42,0	1/1:0,12:12:30.10:441,30,0	1/1:0,31:31:84.24:1212,84,0	1/1:2,29:31:78.25:1125,78,0	1/1:0,16:16:42.14:618,42,0	1/1:1,26:27:78.24:1127,78,0	1/1:1,17:18:45.15:661,45,0	1/1:3,31:34:87.29:1280,87,0	1/1:1,15:16:42.11:595,42,0	1/1:0,13:13:33.07:458,33,0	1/1:0,14:14:42.14:618,42,0	1/1:0,14:14:39.13:574,39,0	0/0:29,0:29:87.27:0,87,1588	1/1:0,23:23:66.18:947,66,0	1/1:4,20:24:59.20:886,59,0	1/1:1,18:19:54.18:794,54,0	1/1:2,34:35:83.95:1236,84,0	1/1:2,41:43:99:1740,120,0	1/1:3,11:14:33.11:486,33,0	1/1:0,33:33:87.29:1281,87,0	1/1:0,21:21:54.18:794,54,0	1/1:3,27:30:81.24:1152,81,0	1/1:0,17:17:42.14:618,42,0	1/1:0,8:8:24.08:353,24,0
chr10	45229005	.	C	CTG	5054.66	PASS	AB=0.627;AC=10;AF=0.179;AN=56;BaseQRankSum=-0.613;DP=885;FS=15.179;HRun=0;HaplotypeScore=170.3046;InbreedingCoeff=0.7573;MQ=63.99;MQ0=7;MQRankSum=-2.726;QD=29.91;ReadPosRankSum=1.612;VQSLOD=5.4443;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:87.16:0,87,1021	0/0:7,0:7:15.02:0,15,161	0/0:37,0:26:25.11:0,25,432	0/0:50,0:36:39.37:0,39,441	0/0:19,0:19:54.17:0,54,669	0/0:37,0:37:78.19:0,78,925	0/0:28,0:28:66.16:0,66,775	0/0:44,0:44:93.07:0,93,1058	0/0:25,0:25:39.09:0,39,453	1/1:5,25:30:72.25:1173,72,0	1/1:15,14:29:14.06:711,14,0	0/0:40,0:40:81.24:0,81,987	0/0:29,0:29:54.07:0,54,622	0/0:19,0:19:27.08:0,27,334	1/1:20,14:34:81.13:1177,81,0	0/1:13,16:29:11.13:817,0,11	0/0:43,0:44:99:0,102,1193	0/1:9,16:24:52.48:540,0,52	0/0:29,0:29:63.16:0,63,738	0/0:22,1:23:48.11:0,48,557	0/0:88,0:87:99:0,166,2172	0/0:11,0:11:27.05:0,27,306	0/0:18,0:19:38.95:0,39,460	0/0:35,0:35:77.94:0,78,952	1/1:11,11:22:42.12:636,42,0	0/0:42,1:43:55.58:0,56,1136	0/0:28,0:27:63.07:0,63,763	0/0:11,0:11:30.09:0,30,371
chr10	45229029	.	ATGTG	A	6363.13	PASS	AB=0.733;AC=18;AF=0.321;AN=56;BaseQRankSum=-4.543;DP=840;FS=1.662;HRun=0;HaplotypeScore=199.1241;InbreedingCoeff=0.8059;MQ=57.25;MQ0=16;MQRankSum=0.919;QD=23.65;ReadPosRankSum=4.752;VQSLOD=4.7320;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,35:49:60.03:977,60,0	0/1:0,1:7:35.96:37,0,36	0/0:35,0:13:2.19:0,2,121	0/0:45,0:18:27.04:0,27,424	0/0:24,0:24:48.16:0,48,1043	0/0:32,0:33:63.18:0,63,1404	0/0:23,0:24:53.92:0,54,1054	0/0:34,0:34:54.14:0,54,913	1/1:3,22:26:45.15:731,45,0	0/0:16,0:22:44.60:0,45,789	0/0:9,0:20:24.95:0,25,439	1/1:8,28:37:72.24:1188,72,0	1/1:5,28:33:59.90:1012,60,0	1/1:3,17:21:33.11:534,33,0	0/0:12,0:35:54.96:0,55,904	0/1:11,1:27:37.24:37,0,854	0/0:39,0:39:93.30:0,93,2087	0/0:20,0:23:36.18:0,36,620	0/0:27,0:26:50.95:0,51,986	0/0:22,0:22:41.68:0,42,875	0/0:82,0:80:99:0,161,3087	1/1:2,8:11:21.06:318,21,0	1/1:6,14:20:26.90:455,27,0	1/1:7,29:37:66.03:1075,66,0	0/0:9,0:22:35.33:0,35,531	0/0:41,0:40:99:0,99,2077	0/0:28,0:27:53.69:0,54,994	0/0:12,0:11:24.08:0,24,530
chr10	45229046	.	TGTGC	T	3605.11	PASS	AB=0.980;AC=19;AF=0.339;AN=56;BaseQRankSum=1.844;DP=844;FS=4.493;HRun=0;HaplotypeScore=201.4758;InbreedingCoeff=0.1000;MQ=54.70;MQ0=16;MQRankSum=0.407;QD=8.88;ReadPosRankSum=3.698;VQSLOD=2.6840;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:40,0:41:4.09:525,4,0	0/1:7,0:7:15.77:16,0,71	0/0:37,0:9:16.33:0,16,223	0/0:52,0:19:4.31:0,4,425	0/0:23,0:23:50.99:0,51,748	0/0:28,0:28:36.91:0,37,997	0/0:23,0:23:0.94:0,1,700	0/1:31,0:31:99:120,0,504	0/1:29,0:29:4.98:373,0,5	0/0:18,1:19:33.66:0,34,753	0/1:22,2:24:5.85:6,0,488	1/1:31,1:32:33.04:652,33,0	0/1:34,0:34:9.03:562,0,9	0/1:22,0:22:14.11:271,0,14	0/0:34,1:35:13.54:0,14,1015	0/1:25,2:26:35.69:36,0,841	0/0:39,0:39:87.98:0,88,2130	0/1:22,0:22:15.13:15,0,587	0/0:24,0:22:35.47:0,35,731	0/0:23,0:23:27.70:0,28,619	0/0:90,0:89:95.16:0,95,2073	0/1:16,0:16:87.94:158,0,88	1/1:16,0:16:12.86:251,13,0	1/1:36,0:36:19.40:570,19,0	0/1:25,2:27:15.71:16,0,571	0/1:42,0:41:34.47:34,0,1408	0/0:34,0:33:36.85:0,37,688	0/0:10,0:9:23.98:0,24,373
chr10	45229050	.	C	CGT	6868.98	PASS	AB=0.834;AC=21;AF=0.375;AN=56;BaseQRankSum=-9.071;DP=846;FS=3.538;HRun=0;HaplotypeScore=168.0973;InbreedingCoeff=0.4154;MQ=55.05;MQ0=16;MQRankSum=1.475;QD=15.79;ReadPosRankSum=2.132;VQSLOD=4.7899;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:42:74.20:0,74,834	0/0:7,0:7:15.05:0,15,177	0/0:34,0:9:23.25:0,23,208	0/0:51,0:20:38.08:0,38,369	1/1:7,18:25:3.25:515,3,0	1/1:3,26:31:26.44:941,26,0	1/1:17,7:24:10.55:562,11,0	0/1:13,18:31:19.90:624,0,20	0/0:31,0:31:57.07:0,57,632	0/1:19,0:19:21:21,0,153	0/1:25,0:25:32.88:33,0,281	0/0:34,0:34:83.70:0,84,903	0/0:35,0:35:74.95:0,75,806	0/0:23,0:23:42.12:0,42,490	0/1:36,0:36:52.53:53,0,196	0/1:26,0:25:56.17:56,0,181	0/0:40,0:40:86.05:0,86,1027	0/0:20,0:21:6.84:0,7,262	0/1:11,14:23:17.15:506,0,17	1/1:5,19:24:29.55:451,30,0	1/1:26,61:86:19.72:1204,20,0	0/0:15,0:15:42.07:0,42,470	0/0:15,0:15:30.03:0,30,342	0/0:37,0:37:71.91:0,72,805	0/0:25,0:25:12.99:0,13,263	1/1:8,32:41:83.85:1162,84,0	0/1:7,23:29:69.27:445,0,69	1/1:2,8:9:18.06:295,18,0
chr10	45229480	.	AAAAAAAAAAAAAAACC	A	8280.25	PASS	AB=0.577;AC=15;AF=0.268;AN=56;BaseQRankSum=11.451;DP=680;FS=0.452;HRun=0;HaplotypeScore=231.8332;InbreedingCoeff=0.8937;MQ=55.74;MQ0=19;MQRankSum=-10.184;QD=39.24;ReadPosRankSum=10.765;VQSLOD=2.6308;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,37:42:32.75:1127,33,0	0/0:9,0:9:24.08:0,24,1029	0/0:44,0:11:10:0,10,299	0/0:33,0:14:28.03:0,28,773	0/0:25,0:25:71.61:0,72,3359	0/0:21,0:21:60.21:0,60,3002	0/0:22,0:22:63.21:0,63,3080	0/0:23,0:22:49.15:0,49,1437	0/1:8,22:30:41.86:949,0,42	0/0:24,0:24:69.24:0,69,2970	0/0:16,0:16:39.13:0,39,1777	1/1:5,18:22:38.98:1458,39,0	1/1:5,23:27:31.53:1148,32,0	1/1:4,31:35:16.92:1625,17,0	0/0:24,0:24:42.14:0,42,2234	0/0:21,0:21:60.68:0,61,2663	0/0:39,0:39:99:0,100,4984	0/0:15,0:15:27.09:0,27,971	0/0:20,0:17:45.15:0,45,1648	0/0:22,0:22:57.20:0,57,3034	0/0:12,0:12:27.09:0,27,1192	1/1:1,5:6:14.72:240,15,0	1/1:3,16:18:18.82:727,19,0	1/1:5,22:26:29.81:1005,30,0	0/0:15,0:14:30.10:0,30,1074	0/0:35,0:33:99:0,99,3896	0/0:24,0:23:66.23:0,66,2999	0/0:25,0:24:66.23:0,66,2494
chr10	45229822	.	T	TA	9979.23	PASS	AB=1.000;AC=33;AF=0.589;AN=56;BaseQRankSum=-13.366;DP=557;FS=10.607;HRun=8;HaplotypeScore=50.6233;InbreedingCoeff=0.9103;MQ=71.05;MQ0=0;MQRankSum=-2.513;QD=27.80;ReadPosRankSum=-0.395;VQSLOD=4.6985;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,102,918	0/0:14,0:14:38.99:0,39,350	0/0:16,0:14:15.71:0,16,160	0/0:11,0:9:2.17:0,2,112	1/1:4,26:30:53.02:812,53,0	1/1:3,24:26:63.19:727,63,0	1/1:0,13:13:39.12:450,39,0	1/1:4,36:40:99:1201,108,0	0/0:15,1:16:13.48:0,13,372	1/1:4,24:28:72.17:798,72,0	1/1:4,20:24:60.08:658,60,0	0/0:13,0:13:36:0,36,325	0/0:17,0:17:42.02:0,42,384	0/0:9,0:9:20.99:0,21,188	1/1:1,14:15:36.11:416,36,0	1/1:2,13:15:30.09:346,30,0	0/0:21,0:21:62.99:0,63,565	1/1:2,20:22:57.17:658,57,0	1/1:6,7:13:24.03:266,24,0	1/1:4,18:22:54.12:608,54,0	1/1:1,12:13:33.10:380,33,0	0/0:17,0:17:48.01:0,48,435	0/0:29,0:29:77.98:0,78,694	0/1:7,0:7:4.82:5,0,95	1/1:1,21:23:63.02:707,63,0	1/1:4,19:23:57.15:647,57,0	1/1:4,19:23:57.12:642,57,0	1/1:0,21:21:57.17:658,57,0
chr10	45230378	.	GC	G	6703.54	PASS	AB=0.531;AC=19;AF=0.339;AN=56;BaseQRankSum=13.605;DP=625;FS=3.771;HRun=6;HaplotypeScore=60.0415;InbreedingCoeff=0.9190;MQ=87.73;MQ0=0;MQRankSum=-1.072;QD=27.36;ReadPosRankSum=-0.171;VQSLOD=5.1458;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,108,1391	0/0:7,0:7:21.07:0,21,276	0/0:21,0:21:51.04:0,51,600	0/0:25,0:25:65.52:0,66,681	1/1:1,22:23:63.16:677,63,0	1/1:3,25:28:60.15:645,60,0	1/1:0,17:17:45.11:484,45,0	1/1:4,25:29:75.14:782,75,0	0/0:20,0:20:54.18:0,54,711	0/0:17,0:17:51.17:0,51,670	0/0:16,0:16:48.15:0,48,620	0/0:27,0:27:81.26:0,81,1065	0/0:27,0:27:78.22:0,78,992	0/0:25,0:25:72.23:0,72,943	0/0:23,0:23:66.21:0,66,868	0/0:31,0:31:81.26:0,81,1052	0/0:29,2:31:22.76:0,23,970	0/0:17,0:17:45.15:0,45,592	1/1:1,21:22:63.16:677,63,0	1/1:1,38:39:99:1099,105,0	1/1:3,21:24:63.16:677,63,0	0/0:9,0:9:24.08:0,24,316	0/0:18,0:18:51.14:0,51,641	0/0:12,0:12:33.11:0,33,434	0/0:15,0:15:45.12:0,45,561	0/1:3,23:26:23.65:664,0,24	1/1:1,24:25:69.17:742,69,0	1/1:4,8:12:24.06:258,24,0
chr10	45231951	.	ATGTG	A	907.55	PASS	AB=0.920;AC=11;AF=0.212;AN=52;BaseQRankSum=0.452;DP=584;FS=0.790;HRun=0;HaplotypeScore=107.6842;InbreedingCoeff=0.6127;MQ=57.58;MQ0=11;MQRankSum=-1.017;QD=6.01;ReadPosRankSum=2.179;VQSLOD=2.2307;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:7.84:0,8,105	0/0:7,0:7:2.80:0,3,50	./.	./.	0/0:13,0:12:6:0,6,64	0/0:27,0:27:1.16:0,1,198	0/1:12,0:11:0:0,0,0	0/0:37,0:37:1.82:0,2,5	0/0:16,0:20:15.03:0,15,264	1/1:19,9:27:35.35:360,35,0	0/1:13,6:19:3.04:41,0,3	0/0:14,0:19:18.02:0,18,289	0/0:11,0:14:8.96:0,9,141	0/0:14,0:16:9.03:0,9,188	0/0:16,0:24:1.89:0,2,4	1/1:11,10:21:12.04:186,12,0	0/0:16,0:25:15.02:0,15,224	1/1:19,6:25:29.60:346,30,0	0/0:20,0:20:15.04:0,15,220	0/0:26,0:26:17.06:0,17,232	0/0:25,0:24:12:0,12,173	0/1:12,0:18:0:0,0,0	0/0:16,0:20:11.34:0,11,99	0/0:20,0:25:6.01:0,6,123	1/1:16,10:27:9.02:120,9,0	0/0:19,0:20:24.08:0,24,392	0/0:20,0:18:24.07:0,24,431	0/0:8,0:8:11.62:0,12,148
chr10	45231995	.	G	GTGTA	4291.16	PASS	AB=0.920;AC=32;AF=0.571;AN=56;BaseQRankSum=-6.042;DP=542;FS=0.472;HRun=0;HaplotypeScore=115.1276;InbreedingCoeff=0.6153;MQ=54.50;MQ0=20;MQRankSum=0.319;QD=11.09;ReadPosRankSum=-1.743;VQSLOD=4.2027;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:27:24.91:25,0,197	0/1:9,0:9:9.12:9,0,99	0/0:11,0:5:14.89:0,15,115	0/0:12,0:5:9.01:0,9,82	1/1:14,0:16:28.05:205,28,0	1/1:23,1:23:11.05:302,11,0	1/1:7,0:6:11.02:80,11,0	1/1:40,0:38:87.37:705,87,0	0/0:17,0:17:28.32:0,28,249	1/1:29,0:28:0.58:309,1,0	1/1:16,0:16:10.32:182,10,0	0/0:19,0:19:31.25:0,31,242	0/0:15,0:14:24.37:0,24,209	0/0:14,0:14:24.86:0,25,222	1/1:33,0:32:44.45:428,44,0	1/1:17,0:17:1.82:110,2,0	0/0:27,0:26:31.22:0,31,253	1/1:27,0:26:4:213,4,0	1/1:15,0:14:17.91:276,18,0	1/1:6,24:31:6.90:154,7,0	0/1:10,8:18:46.20:69,0,46	0/0:13,0:13:14.98:0,15,123	0/0:12,0:10:9.32:0,9,85	0/0:15,0:15:18.63:0,19,169	0/1:17,0:17:0.87:83,0,1	1/1:6,0:22:35.93:465,36,0	1/1:22,0:20:35.97:432,36,0	1/1:11,0:11:18.15:247,18,0
chr10	45232170	.	GGTGT	G	2013.31	PASS	AB=0.583;AC=15;AF=0.278;AN=54;BaseQRankSum=5.597;DP=503;FS=7.189;HRun=0;HaplotypeScore=86.1361;InbreedingCoeff=0.8519;MQ=54.81;MQ0=11;MQRankSum=-1.078;QD=15.61;ReadPosRankSum=2.095;VQSLOD=2.4885;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:28:19.46:0,19,98	0/1:2,2:7:16.85:84,0,17	./.	0/0:15,0:8:6.49:0,6,114	0/0:18,0:18:27.05:0,27,558	0/0:15,0:17:24.68:0,25,449	0/0:15,0:14:32.83:0,33,667	0/0:26,1:23:19.87:0,20,361	1/1:8,6:15:15.04:219,15,0	0/0:18,0:19:41.88:0,42,890	0/0:16,0:16:18.06:0,18,419	1/1:13,9:23:27.55:411,28,0	1/1:9,7:19:24.06:322,24,0	1/1:8,7:15:18.06:287,18,0	0/0:14,0:18:29.84:0,30,613	0/0:10,0:14:20.54:0,21,339	0/0:23,0:27:44.89:0,45,970	0/0:20,0:24:26.56:0,27,495	0/0:18,0:15:14.79:0,15,287	0/0:14,0:14:24.08:0,24,553	0/0:17,0:18:36.12:0,36,735	1/1:6,3:9:6.02:96,6,0	1/1:11,2:13:12.04:185,12,0	1/1:10,16:26:39.13:601,39,0	0/0:11,0:14:17.50:0,18,243	0/0:16,0:16:17.80:0,18,335	0/0:14,0:15:20.78:0,21,274	0/0:19,0:20:38.86:0,39,796
chr10	45232296	.	TC	T	5594.54	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=14.609;DP=544;FS=12.235;HRun=3;HaplotypeScore=71.6657;InbreedingCoeff=0.9928;MQ=58.97;MQ0=13;MQRankSum=-4.050;QD=19.77;ReadPosRankSum=3.287;VQSLOD=3.5416;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:96.29:0,96,1341	0/0:10,0:10:27.08:0,27,369	0/0:24,0:9:14.01:0,14,163	0/0:28,0:12:22.17:0,22,163	1/1:1,10:11:24.03:226,24,0	1/1:1,13:13:30.03:282,30,0	1/1:3,16:18:42.05:395,42,0	1/1:2,19:21:54.05:504,54,0	0/0:13,0:13:33.08:0,33,435	1/1:5,15:18:42.02:389,42,0	1/1:7,8:15:21.02:198,21,0	0/0:25,0:24:66.19:0,66,911	0/0:15,0:15:45.12:0,45,609	0/0:19,0:19:57.18:0,57,798	1/1:2,18:20:51.06:480,51,0	1/1:6,13:19:36.04:339,36,0	0/0:23,1:24:35.08:0,35,898	1/1:4,24:28:69.03:641,69,0	1/1:6,9:12:27.03:254,27,0	1/1:5,15:20:24.02:226,24,0	1/1:7,11:17:27.02:249,27,0	0/0:26,0:26:69.13:0,69,894	0/0:15,0:15:39.07:0,39,472	0/0:28,0:28:81.17:0,81,1119	1/1:3,19:22:51.06:480,51,0	1/1:6,11:17:33.04:311,33,0	1/1:0,18:18:51.06:480,51,0	1/1:1,5:6:15.02:141,15,0
chr10	45234514	.	TTCCTTTCCTTTCCTC	T	7731.81	PASS	AB=0.987;AC=16;AF=0.286;AN=56;BaseQRankSum=12.622;DP=805;FS=8.404;HRun=0;HaplotypeScore=302.6011;InbreedingCoeff=0.8093;MQ=60.10;MQ0=13;MQRankSum=-11.189;QD=33.33;ReadPosRankSum=1.885;VQSLOD=2.6756;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:72.25:0,72,4010	0/0:18,0:18:45.15:0,45,2732	0/0:46,0:23:6.61:0,7,127	0/0:54,0:24:20.65:0,21,413	0/0:26,0:26:48.13:0,48,2864	0/0:27,0:27:45.14:0,45,2952	0/0:31,0:31:63.22:0,63,3578	0/0:35,0:35:51.17:0,51,2065	1/1:9,8:17:12.04:500,12,0	0/0:34,0:34:51.18:0,51,3259	0/0:25,0:25:42.13:0,42,2590	1/1:6,11:17:21.07:861,21,0	1/1:11,20:31:45.15:1859,45,0	1/1:7,21:28:39.13:1622,39,0	0/0:37,0:37:93.29:0,93,5705	0/1:37,1:38:43.77:44,0,5113	0/0:24,0:24:42.11:0,42,2920	0/0:21,0:21:45.15:0,45,2757	0/0:23,0:23:27.09:0,27,1803	0/0:30,0:30:63.22:0,63,4048	0/0:25,0:25:39.13:0,39,2396	1/1:13,15:28:45.02:1508,45,0	1/1:10,14:24:20.54:836,21,0	1/1:12,10:22:12.04:494,12,0	0/0:19,0:19:33.11:0,33,2294	0/0:32,0:32:75.26:0,75,4972	0/0:28,0:27:45.15:0,45,3040	0/1:27,0:27:7.41:7,0,2843
chr10	45234917	.	AAGAGAGAGAGAGAGAGAGAGAGAGAGAG	A	2987.16	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=6.039;DP=514;FS=23.860;HRun=0;HaplotypeScore=306.4842;InbreedingCoeff=0.7768;MQ=63.40;MQ0=8;MQRankSum=-3.642;QD=21.19;ReadPosRankSum=0.873;VQSLOD=1.1646;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:27:13.86:0,14,368	0/0:9,0:9:12.04:0,12,1178	0/0:14,0:9:2.94:0,3,18	0/0:17,0:10:6.02:0,6,70	0/0:16,0:16:24.08:0,24,1546	0/0:15,0:18:30.10:0,30,1911	0/0:15,0:21:12.04:0,12,1095	0/0:30,0:29:40.28:0,40,1778	1/1:14,6:19:6.02:432,6,0	0/0:27,0:25:36.12:0,36,3052	0/0:24,0:24:36.12:0,36,2707	1/1:17,0:17:3.01:92,3,0	1/1:8,5:13:9.03:648,9,0	1/1:12,7:19:9.03:648,9,0	0/0:18,0:18:21.06:0,21,1533	0/0:13,0:13:21.06:0,21,1241	0/0:13,0:13:15.05:0,15,1151	0/0:9,0:14:15.05:0,15,790	0/0:20,0:18:27.04:0,27,1493	0/0:18,0:15:9.03:0,9,371	0/0:15,0:15:12.04:0,12,1065	1/1:12,10:22:11.95:472,12,0	1/1:13,12:25:8.52:648,9,0	1/1:17,8:23:3.01:216,3,0	0/0:13,0:12:12.04:0,12,1132	0/0:17,0:17:33.10:0,33,2300	0/0:20,0:20:18.06:0,18,1083	0/0:7,0:5:15.05:0,15,1264
chr10	45235144	.	GCTCCACACCTCCACAC	G	3162.90	PASS	AB=0.949;AC=19;AF=0.339;AN=56;BaseQRankSum=6.308;DP=558;FS=5.799;HRun=0;HaplotypeScore=291.3438;InbreedingCoeff=0.3246;MQ=73.43;MQ0=32;MQRankSum=-8.503;QD=16.82;ReadPosRankSum=3.956;VQSLOD=1.4623;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:39.13:0,39,2440	0/0:8,0:8:18.05:0,18,488	0/0:76,0:36:30.03:0,30,346	0/0:67,0:31:24.44:0,24,280	0/1:14,0:11:21.91:29,0,22	1/1:13,0:13:21.54:258,22,0	1/1:21,0:20:3.04:187,3,0	0/0:28,0:27:16.57:0,17,160	0/0:10,0:10:19.88:0,20,903	0/1:17,2:17:99:565,0,130	1/1:10,3:13:6.07:388,6,0	0/0:16,0:16:24.08:0,24,1343	0/0:3,0:3:3.01:0,3,226	0/0:13,0:13:24.08:0,24,1299	1/1:9,2:9:6.02:262,6,0	0/1:10,1:10:49.59:480,0,50	0/0:22,0:22:45.10:0,45,2034	1/1:9,2:10:15.05:480,15,0	0/1:27,0:22:2.75:101,0,3	0/0:10,0:9:6.01:0,6,75	0/0:17,0:16:11.91:0,12,192	0/0:15,0:13:12.04:0,12,909	0/0:15,0:15:18.06:0,18,669	0/0:27,0:27:63.22:0,63,3915	0/1:7,2:8:45.87:257,0,46	0/1:25,0:23:99:231,0,504	0/1:9,0:9:48.85:64,0,49	1/1:5,0:3:3.01:37,3,0
chr10	45235171	.	CCACACCTCCACA	C	4911.60	PASS	AB=0.921;AC=15;AF=0.268;AN=56;BaseQRankSum=5.019;DP=1389;FS=1.999;HRun=0;HaplotypeScore=341.2780;InbreedingCoeff=-0.3683;MQ=43.37;MQ0=494;MQRankSum=-8.978;QD=6.68;ReadPosRankSum=2.701;VQSLOD=2.9875;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:43:93.45:0,93,3641	0/0:45,0:24:54.19:0,54,1551	0/0:163,0:33:70.15:0,70,1503	0/0:128,0:34:42.92:0,43,1389	0/1:26,3:18:88.74:89,0,634	0/1:15,8:20:24.37:861,0,24	0/1:15,7:15:99:665,0,204	0/1:49,0:35:99:420,0,1771	0/0:28,0:18:50.51:0,51,1528	0/1:141,0:64:43.58:44,0,3939	0/1:30,0:19:99:195,0,476	0/0:22,0:19:51.17:0,51,1964	0/0:11,0:7:14.76:0,15,429	0/0:23,0:19:48.16:0,48,1918	0/1:22,0:14:99:159,0,261	0/1:22,0:18:99:127,0,606	0/0:38,0:35:96.01:0,96,3590	0/1:23,0:19:99:160,0,607	0/1:115,3:20:99:475,0,583	0/0:36,1:22:10.15:0,10,881	0/1:41,1:27:14.99:15,0,1244	0/0:35,0:20:42.13:0,42,1422	0/0:32,0:21:36.12:0,36,1463	0/0:40,0:34:84.27:0,84,4130	0/1:71,0:32:51.88:52,0,1708	0/1:93,8:67:99:1164,0,3947	0/1:11,2:12:99:382,0,223	0/1:12,1:5:99:104,0,260
chr10	45235172	.	C	CT	2820.91	PASS	AB=0.896;AC=21;AF=0.375;AN=56;BaseQRankSum=-5.986;DP=1390;FS=2.651;HRun=0;HaplotypeScore=213.1755;InbreedingCoeff=-0.6455;MQ=42.49;MQ0=494;MQRankSum=-1.249;QD=2.52;ReadPosRankSum=-0.802;VQSLOD=3.0250;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:50,2:44:8.34:8,0,973	0/1:35,10:24:99:150,0,364	0/1:161,1:33:37.12:37,0,625	0/0:125,0:32:22.48:0,22,617	0/1:28,2:16:46.42:46,0,142	0/0:21,4:21:10.05:0,10,51	0/1:21,2:14:49.72:64,0,50	0/1:45,8:37:99:262,0,526	0/1:25,3:18:99:105,0,438	0/1:104,37:64:99:584,0,1090	0/1:31,1:21:35:35,0,179	0/0:21,1:19:3.44:0,3,595	0/1:11,0:7:12.35:12,0,97	0/1:19,4:19:91.97:92,0,475	0/1:21,1:14:66.07:66,0,161	0/1:18,3:17:0.30:0,0,514	0/1:33,5:35:99:181,0,864	0/1:22,1:19:26.53:27,0,411	0/1:100,18:21:55.97:56,0,188	0/1:34,6:24:45.23:45,0,207	0/1:39,4:26:58.73:59,0,250	0/1:31,4:20:54.14:54,0,363	0/0:27,5:21:4.34:0,4,383	0/0:40,1:35:12.62:0,13,997	0/1:48,22:32:99:372,0,312	0/1:81,23:66:99:712,0,478	0/0:12,1:11:0.94:0,1,152	0/0:11,2:5:0.65:0,1,68
chr10	45235179	.	CCACA	C	1888.51	PASS	AB=0.926;AC=16;AF=0.286;AN=56;BaseQRankSum=6.882;DP=1353;FS=0.466;HRun=0;HaplotypeScore=240.7590;InbreedingCoeff=-0.2167;MQ=42.38;MQ0=469;MQRankSum=-9.008;QD=2.74;ReadPosRankSum=4.633;VQSLOD=2.3331;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:43:99:0,107,2293	0/0:43,0:23:52.56:0,53,874	0/0:153,0:31:68.41:0,68,1182	0/0:120,0:32:55:0,55,1140	0/1:28,2:17:61.34:61,0,344	1/1:22,7:25:21.15:280,21,0	0/1:21,1:14:99:251,0,160	0/1:43,6:34:99:236,0,1304	0/0:28,0:18:46.45:0,46,927	0/1:135,3:65:89.79:90,0,2474	0/1:30,2:21:44.92:45,0,198	0/0:21,0:18:51.16:0,51,1111	0/0:12,0:8:18.05:0,18,329	0/0:24,0:20:54.18:0,54,1238	0/1:21,0:14:30.04:30,0,231	0/1:16,4:16:99:247,0,498	0/0:38,0:35:94.11:0,94,2107	0/1:22,0:18:63.30:63,0,457	0/1:109,2:20:99:138,0,451	0/1:30,11:26:29.80:30,0,546	0/1:41,2:28:4.91:5,0,854	0/0:31,0:18:39.16:0,39,751	0/0:33,0:22:39.13:0,39,934	0/0:39,0:33:80.49:0,80,2072	0/0:70,1:34:22:0,22,952	0/1:100,4:67:99:318,0,2366	0/1:10,3:12:99:230,0,117	0/1:12,1:5:27.66:28,0,117
chr10	45235306	.	GT	G	2406.50	PASS	AB=0.600;AC=15;AF=0.268;AN=56;BaseQRankSum=-10.495;DP=528;FS=0.954;HRun=11;HaplotypeScore=103.4409;InbreedingCoeff=0.8236;MQ=74.51;MQ0=5;MQRankSum=5.381;QD=15.23;ReadPosRankSum=7.149;VQSLOD=3.7065;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,31:35:74.89:615,75,0	0/0:4,0:9:14.20:0,14,71	0/0:53,0:28:20.56:0,21,237	0/0:41,0:23:18.88:0,19,137	0/0:21,0:20:15.32:0,15,114	0/0:4,0:16:5.83:0,6,38	0/0:3,0:12:2.84:0,3,14	0/0:13,0:12:3.41:0,3,109	1/1:4,8:12:17.95:146,18,0	0/0:18,0:16:29.92:0,30,178	0/0:19,0:19:34.46:0,34,198	1/1:5,21:26:50.91:415,51,0	1/1:2,11:13:26.97:222,27,0	1/1:5,14:19:44.61:356,45,0	0/0:9,0:8:12.77:0,13,82	0/0:17,0:14:22.13:0,22,145	0/0:22,2:24:32.43:0,32,519	0/0:9,0:9:14.87:0,15,106	0/0:19,0:16:18.29:0,18,122	0/0:22,0:19:14.87:0,15,168	0/0:7,0:7:11.81:0,12,70	0/1:4,8:12:7.72:148,0,8	1/1:2,20:23:55.96:448,56,0	1/1:3,14:18:31.79:252,32,0	0/0:18,0:17:35.42:0,35,215	0/0:18,0:18:19.16:0,19,115	0/0:14,0:13:20.70:0,21,141	0/0:11,0:9:20.81:0,21,145
chr10	45235510	.	G	GT	1993.55	PASS	AB=0.900;AC=34;AF=0.607;AN=56;BaseQRankSum=0.706;DP=557;FS=5.847;HRun=13;HaplotypeScore=93.7800;InbreedingCoeff=0.6132;MQ=62.09;MQ0=13;MQRankSum=-1.711;QD=4.85;ReadPosRankSum=-3.165;VQSLOD=1.5948;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,1:22:8.72:0,9,209	0/0:2,0:6:8.15:0,8,23	0/1:59,0:22:28.47:28,0,33	0/1:40,1:17:1.35:1,0,37	1/1:12,0:14:8.52:43,9,0	1/1:5,0:14:18.71:91,19,0	1/1:12,0:25:28.05:142,28,0	1/1:14,0:20:21.27:110,21,0	0/0:11,0:10:25.83:0,26,170	1/1:9,15:23:20.56:315,21,0	1/1:7,4:12:0.28:122,0,0	0/0:18,0:18:9.19:0,9,205	0/0:20,0:20:31.40:0,31,211	0/0:15,0:13:17.66:0,18,121	1/1:9,15:25:44.89:372,45,0	0/1:10,14:25:25.84:202,0,26	0/0:23,0:21:29.67:0,30,202	1/1:10,4:13:23.35:204,23,0	1/1:18,0:19:10.05:63,10,0	1/1:7,0:9:5.82:37,6,0	1/1:1,0:4:5.59:26,6,0	0/0:12,0:9:14.67:0,15,102	0/0:10,0:10:14.83:0,15,103	0/1:20,0:20:4.89:5,0,139	1/1:7,11:19:6.28:188,6,0	1/1:21,0:25:8.77:84,9,0	1/1:10,2:18:14.71:73,15,0	1/1:9,0:12:16.79:87,17,0
chr10	45235941	.	GT	G	5005.53	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=8.837;DP=643;FS=7.460;HRun=7;HaplotypeScore=89.0128;InbreedingCoeff=0.9618;MQ=58.58;MQ0=26;MQRankSum=1.822;QD=14.81;ReadPosRankSum=2.275;VQSLOD=4.4651;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:68.90:0,69,790	0/0:8,0:8:17.63:0,18,185	0/0:71,0:16:6.49:0,6,154	0/0:73,2:24:29.11:0,29,233	1/1:11,22:31:73.21:556,73,0	1/1:9,8:17:29.21:233,29,0	1/1:9,6:15:31.50:224,31,0	1/1:15,11:25:14.88:299,15,0	0/0:19,0:19:54.17:0,54,678	1/1:7,18:25:40.70:366,41,0	1/1:2,12:14:39.97:293,40,0	0/0:8,0:8:20.71:0,21,212	0/0:10,0:10:30.10:0,30,377	0/0:12,0:12:33.07:0,33,397	1/1:3,5:8:5.03:31,5,0	1/1:3,15:18:27.43:202,27,0	0/0:35,0:35:99:0,102,1239	1/1:8,21:29:48.42:384,48,0	1/1:14,14:27:17.79:375,18,0	1/1:9,6:15:19.08:166,19,0	1/1:8,8:16:29.62:267,30,0	0/0:13,0:12:30.08:0,30,364	0/0:18,0:18:51.16:0,51,630	0/0:7,0:7:21.07:0,21,264	1/1:10,15:25:54.46:464,54,0	1/1:9,13:21:48.18:390,48,0	1/1:9,14:23:37.44:382,37,0	1/1:3,21:24:46.73:374,47,0
chr10	45236025	.	G	GTTTGTT	8265.09	PASS	AB=0.591;AC=19;AF=0.339;AN=56;BaseQRankSum=-9.725;DP=530;FS=11.082;HRun=0;HaplotypeScore=113.5713;InbreedingCoeff=0.8944;MQ=60.92;MQ0=4;MQRankSum=-9.241;QD=44.68;ReadPosRankSum=-2.186;VQSLOD=3.5342;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:67.33:0,67,1383	0/0:10,0:10:24.04:0,24,416	0/0:32,0:19:27.91:0,28,395	0/0:22,0:12:9.01:0,9,156	1/1:2,20:23:51.13:1359,51,0	1/1:2,11:16:27.09:877,27,0	1/1:4,11:15:18.06:581,18,0	1/1:7,21:31:71.84:1228,72,0	0/0:12,0:12:33.11:0,33,706	0/0:29,0:29:72.24:0,72,1415	0/0:10,0:10:24.08:0,24,491	0/0:15,0:15:39.12:0,39,727	0/0:12,0:12:24.07:0,24,472	0/0:13,0:13:33.10:0,33,667	0/0:14,0:14:42.13:0,42,790	0/0:14,0:14:35.76:0,36,728	0/0:34,0:34:87.20:0,87,1626	0/0:26,0:26:63.19:0,63,1244	1/1:10,3:12:29.99:611,30,0	1/1:4,11:16:21.07:646,21,0	1/1:1,5:8:12.04:307,12,0	0/0:18,0:18:48.16:0,48,966	0/0:15,0:14:36.10:0,36,638	0/0:23,0:23:66:0,66,1307	0/0:17,0:17:39.09:0,39,641	0/1:8,18:26:99:1092,0,104	1/1:5,20:26:39.12:1267,39,0	1/1:7,3:10:9.02:296,9,0
chr10	45236412	.	A	AGTTT	11935.73	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=-4.146;DP=528;FS=5.525;HRun=0;HaplotypeScore=110.9261;InbreedingCoeff=0.9955;MQ=72.08;MQ0=2;MQRankSum=-10.677;QD=41.16;ReadPosRankSum=-1.172;VQSLOD=4.9301;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:81.19:0,81,1292	0/0:8,0:8:18.05:0,18,279	0/0:29,0:19:29.05:0,29,496	0/0:21,0:20:31.22:0,31,464	1/1:6,15:22:33.04:687,33,0	1/1:5,5:9:21.54:494,22,0	1/1:13,3:16:33.06:638,33,0	1/1:27,6:33:69.11:1336,69,0	0/0:25,0:25:57.17:0,57,941	1/1:18,5:21:44.96:952,45,0	1/1:9,2:11:21.07:429,21,0	0/0:15,0:15:30.10:0,30,525	0/0:20,0:20:48.13:0,48,773	0/0:13,0:13:30.08:0,30,476	1/1:15,2:16:30.10:605,30,0	1/1:20,2:22:57.19:1278,57,0	0/0:26,0:26:52.83:0,53,900	1/1:19,1:20:33.25:631,33,0	1/1:19,2:21:48.07:922,48,0	1/1:9,5:14:36.08:757,36,0	1/1:10,4:12:20.98:272,21,0	0/0:12,0:12:33.11:0,33,582	0/0:14,0:14:33.09:0,33,522	0/0:24,0:24:60.16:0,60,1013	1/1:12,6:18:39.09:856,39,0	1/1:3,17:19:51.02:972,51,0	1/1:13,5:18:30.10:684,30,0	1/1:7,3:10:18.06:420,18,0
chr10	45236417	.	G	GTTTT	8777.49	PASS	AB=0.975;AC=28;AF=0.500;AN=56;BaseQRankSum=7.738;DP=555;FS=8.855;HRun=3;HaplotypeScore=150.6158;InbreedingCoeff=0.7115;MQ=66.14;MQ0=2;MQRankSum=-12.182;QD=27.95;ReadPosRankSum=0.975;VQSLOD=1.3527;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:87.09:0,87,1457	0/0:8,0:8:15.71:0,16,253	0/0:26,0:16:44.62:0,45,675	0/0:18,0:17:31.16:0,31,484	1/1:21,0:21:29.16:540,29,0	1/1:10,0:9:24.03:380,24,0	0/1:15,0:15:4.55:494,0,5	0/1:39,1:40:46.80:785,0,47	0/0:25,0:25:52.64:0,53,1057	1/1:23,0:20:6.99:646,7,0	1/1:15,0:15:22.14:340,22,0	0/0:16,0:16:32.14:0,32,604	0/0:20,0:20:54.04:0,54,876	0/0:14,0:14:36.02:0,36,571	1/1:18,0:17:12.03:422,12,0	1/1:21,1:22:51.60:969,52,0	0/0:27,0:27:41.96:0,42,1041	0/1:19,0:19:8.74:558,0,9	0/1:23,1:24:23.58:574,0,24	1/1:15,1:16:31.79:538,32,0	1/1:17,0:15:7.70:194,8,0	0/0:14,0:14:36.07:0,36,612	0/0:13,0:13:36.11:0,36,608	0/0:27,0:27:49.57:0,50,1031	1/1:23,1:23:25.48:682,25,0	1/1:20,0:19:28.14:705,28,0	1/1:20,0:19:29.09:581,29,0	1/1:8,1:9:23.91:369,24,0
chr10	45236421	.	G	GTTT	6308.71	PASS	AB=0.934;AC=20;AF=0.357;AN=56;BaseQRankSum=7.588;DP=557;FS=9.906;HRun=3;HaplotypeScore=116.5216;InbreedingCoeff=0.0365;MQ=63.86;MQ0=2;MQRankSum=-8.003;QD=19.96;ReadPosRankSum=1.101;VQSLOD=1.1032;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:83.88:0,84,1332	0/0:9,0:9:22.76:0,23,276	0/0:25,0:14:26.91:0,27,472	0/0:17,0:16:30.05:0,30,472	1/1:19,1:20:26.71:400,27,0	1/1:12,0:12:14.82:247,15,0	0/1:16,2:18:83.71:329,0,84	0/1:34,1:35:99:862,0,129	0/0:22,0:22:66.17:0,66,1012	0/1:23,2:22:28.59:509,0,29	1/1:12,2:15:1.79:301,2,0	0/0:14,0:14:42.14:0,42,668	0/0:21,0:21:54.14:0,54,837	0/0:13,0:13:36.09:0,36,551	0/1:18,1:18:53.27:295,0,53	1/1:14,8:22:9.48:773,9,0	0/0:25,0:25:70.48:0,70,1092	0/1:17,2:19:99:296,0,124	0/1:24,1:24:99:419,0,147	0/1:17,2:19:74.74:341,0,75	0/1:14,0:12:39.45:124,0,39	0/0:14,0:14:37.16:0,37,613	0/0:17,0:17:45.08:0,45,660	0/0:31,0:31:71.64:0,72,1182	0/1:24,1:24:35.93:408,0,36	0/1:19,0:18:5.44:478,0,5	0/1:15,4:19:30.89:325,0,31	0/1:8,1:9:19.39:201,0,19
chr10	45236422	.	GT	G	265.23	PASS	AB=0.785;AC=4;AF=0.071;AN=56;BaseQRankSum=-3.091;DP=592;FS=12.260;HRun=15;HaplotypeScore=121.0722;InbreedingCoeff=-0.0846;MQ=61.87;MQ0=2;MQRankSum=3.175;QD=3.05;ReadPosRankSum=3.233;VQSLOD=-0.3767;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:12,22:36:57.41:295,0,57	0/1:4,5:9:35.74:47,0,36	0/1:26,0:14:21.22:21,0,67	0/1:13,2:15:6.37:6,0,60	0/0:18,0:20:33.20:0,33,183	0/0:12,0:12:13.24:0,13,163	0/0:13,0:19:42.15:0,42,242	0/0:29,0:35:58.18:0,58,310	0/0:20,1:22:25.23:0,25,307	0/0:18,0:26:47.48:0,47,251	0/0:13,0:16:21.20:0,21,124	0/0:15,0:15:32.82:0,33,261	0/0:19,3:23:12.72:0,13,239	0/0:12,1:13:20.99:0,21,182	0/0:12,0:22:27.41:0,27,149	0/0:10,0:22:46.64:0,47,223	0/0:22,2:26:20.97:0,21,387	0/0:13,0:20:31.66:0,32,184	0/0:17,0:26:45.61:0,46,242	0/0:11,0:22:50.90:0,51,295	0/0:9,0:14:14.32:0,14,76	0/0:12,1:14:10.56:0,11,203	0/0:14,2:16:3.18:0,3,244	0/0:27,1:32:51.93:0,52,538	0/0:13,0:27:43.59:0,44,251	0/0:19,0:19:35.36:0,35,181	0/0:15,0:21:44.54:0,45,252	0/0:5,0:13:25.86:0,26,153
chr10	45237218	.	T	TA	2317.22	PASS	AB=0.820;AC=22;AF=0.393;AN=56;BaseQRankSum=-7.210;DP=550;FS=1.900;HRun=13;HaplotypeScore=79.2837;InbreedingCoeff=0.7099;MQ=81.90;MQ0=0;MQRankSum=-0.898;QD=9.66;ReadPosRankSum=-1.736;VQSLOD=2.7967;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:10,28:38:30.47:421,30,0	0/0:4,0:4:8.73:0,9,58	0/0:23,0:20:6.34:0,6,114	0/0:19,0:18:1.85:0,2,124	1/1:2,15:18:29.78:251,30,0	1/1:4,14:20:18.13:287,18,0	1/1:6,15:22:7.17:191,7,0	1/1:6,13:22:8.46:233,8,0	0/0:18,0:18:38.51:0,39,266	0/1:23,2:25:23.12:23,0,152	0/0:14,0:14:23.17:0,23,153	0/0:27,0:28:44.84:0,45,374	0/0:21,1:24:22.71:0,23,301	0/0:21,0:21:12.29:0,12,201	0/0:14,0:18:33.77:0,34,216	0/0:19,0:22:53.62:0,54,342	0/0:28,0:29:55.47:0,55,376	0/0:24,0:25:49.39:0,49,325	1/1:6,11:17:9.41:219,9,0	1/1:0,5:5:14.92:122,15,0	1/1:8,12:20:15.46:286,15,0	0/0:8,0:8:14.85:0,15,103	0/0:11,1:12:1.25:0,1,137	0/0:33,1:36:25.07:0,25,412	0/0:8,0:9:19.82:0,20,128	0/1:12,8:20:22.97:141,0,23	1/1:18,6:25:22.16:305,22,0	1/1:3,1:8:5.84:42,6,0
chr10	45237369	.	A	AG	13584.84	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=-16.304;DP=587;FS=2.228;HRun=1;HaplotypeScore=50.9359;InbreedingCoeff=0.9996;MQ=81.33;MQ0=0;MQRankSum=-1.678;QD=40.31;ReadPosRankSum=1.190;VQSLOD=5.3258;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:87.27:0,87,1114	0/0:14,0:14:42.10:0,42,524	0/0:17,0:17:44.24:0,44,571	0/0:13,0:13:33.06:0,33,382	1/1:0,17:17:50.98:683,51,0	1/1:0,30:30:78.26:1168,78,0	1/1:1,18:19:48.16:719,48,0	1/1:1,37:38:99:1643,111,0	0/0:20,0:20:57.17:0,57,725	1/1:1,23:24:72.22:1046,72,0	1/1:2,13:15:38.72:584,39,0	0/0:24,0:24:72.22:0,72,920	0/0:17,0:17:51.15:0,51,637	0/0:20,0:20:60.17:0,60,750	1/1:0,16:16:33.11:494,33,0	1/1:0,26:26:69.23:1033,69,0	0/0:24,0:24:66.21:0,66,856	1/1:0,10:9:30.10:449,30,0	1/1:1,22:23:66.22:987,66,0	1/1:0,12:12:36.04:511,36,0	1/1:0,38:39:99:1483,99,0	0/0:19,0:19:57.19:0,57,739	0/0:14,0:14:36.10:0,36,453	0/0:39,0:39:99:0,108,1366	1/1:1,15:16:36.12:539,36,0	1/1:0,24:24:72.24:1077,72,0	1/1:0,18:18:51.17:764,51,0	1/1:0,10:10:27.09:404,27,0
chr10	45239660	.	G	GT	2374.17	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=11.352;DP=515;FS=0.413;HRun=0;HaplotypeScore=68.2545;InbreedingCoeff=0.8996;MQ=64.47;MQ0=0;MQRankSum=0.997;QD=15.32;ReadPosRankSum=4.009;VQSLOD=5.3462;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,29:34:42.46:585,42,0	0/0:5,0:5:14.77:0,15,119	0/0:7,0:7:17.87:0,18,228	0/0:7,0:6:18.06:0,18,236	0/0:29,0:29:77.29:0,77,984	0/0:22,0:22:66.20:0,66,878	0/0:14,0:14:42.13:0,42,569	0/0:25,0:25:72.22:0,72,969	1/1:1,16:17:37.98:373,38,0	0/0:19,0:19:57.06:0,57,768	0/0:18,0:18:47.90:0,48,625	1/1:5,27:34:39.13:552,39,0	1/1:4,12:16:5.72:290,6,0	1/1:2,10:12:27.83:256,28,0	0/0:18,0:18:51.13:0,51,679	0/0:26,0:26:78.26:0,78,1075	0/0:17,0:17:48.15:0,48,654	0/0:16,0:16:48.16:0,48,660	0/0:17,0:17:48:0,48,607	0/0:18,0:18:51.13:0,51,677	0/0:22,0:22:60.20:0,60,835	1/1:1,11:13:2.33:155,2,0	1/1:8,9:18:1.04:183,1,0	1/1:3,7:11:17.84:170,18,0	0/0:14,0:14:42.10:0,42,564	0/0:30,0:30:90.29:0,90,1230	0/0:26,0:25:75.12:0,75,1016	0/0:10,0:10:30.10:0,30,417
chr10	45240139	.	T	TAA	1660.87	PASS	AB=1.000;AC=22;AF=0.393;AN=56;BaseQRankSum=2.421;DP=458;FS=9.262;HRun=3;HaplotypeScore=90.4208;InbreedingCoeff=0.6112;MQ=78.12;MQ0=11;MQRankSum=-0.053;QD=9.08;ReadPosRankSum=-1.772;VQSLOD=-0.7222;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:19,1:20:45.84:438,46,0	1/1:4,0:4:9.46:41,9,0	0/0:30,0:19:32.58:0,33,370	0/0:37,0:25:49.89:0,50,524	0/0:22,0:22:53.82:0,54,427	0/0:20,0:18:53.88:0,54,434	0/0:8,0:8:13.52:0,14,107	0/0:24,0:23:57.20:0,57,463	1/1:2,14:18:9.97:167,10,0	0/0:10,0:10:3.59:0,4,159	0/1:5,0:5:10.32:10,0,40	1/1:16,0:16:14.61:207,15,0	1/1:2,15:20:8.90:164,9,0	1/1:0,15:16:6.02:110,6,0	0/0:17,0:17:21.52:0,22,289	0/1:17,0:16:63.06:63,0,130	0/0:17,0:17:37.95:0,38,335	0/1:5,0:4:11.40:11,0,35	0/0:16,0:16:41.87:0,42,343	0/0:14,0:14:29.79:0,30,229	0/0:21,0:21:40.84:0,41,304	1/1:13,1:14:29.71:313,30,0	1/1:2,9:13:5.71:72,6,0	1/1:3,16:22:9.04:215,9,0	0/1:13,0:13:49.59:50,0,118	0/0:5,0:5:11.99:0,12,104	0/0:28,0:28:71.18:0,71,558	0/0:6,0:6:17.93:0,18,141
chr10	45240141	.	AACACACAC	A	2245.03	PASS	AB=0.667;AC=17;AF=0.304;AN=56;BaseQRankSum=2.648;DP=495;FS=3.323;HRun=0;HaplotypeScore=126.1351;InbreedingCoeff=0.7099;MQ=73.74;MQ0=11;MQRankSum=-4.368;QD=15.59;ReadPosRankSum=3.711;VQSLOD=2.7543;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:25.33:0,25,784	1/1:4,0:4:9.03:206,9,0	0/0:29,0:18:2.22:0,2,7	0/0:35,0:23:3.46:0,3,25	1/1:13,8:22:23.99:471,24,0	1/1:15,3:18:17.84:313,18,0	1/1:7,1:8:2.88:15,3,0	0/0:22,0:21:8.96:0,9,93	0/0:19,0:19:18.06:0,18,592	0/0:9,0:13:30.09:0,30,963	0/0:5,0:6:9.03:0,9,339	0/0:17,0:17:27.09:0,27,817	0/0:20,0:20:11.81:0,12,428	0/0:16,0:16:6.02:0,6,213	0/0:19,0:20:21.07:0,21,665	0/0:14,0:25:27.09:0,27,945	0/0:18,0:18:21.07:0,21,714	0/0:7,0:8:9.03:0,9,310	1/1:15,2:17:1.94:21,2,0	1/1:6,8:14:18.01:391,18,0	1/1:22,0:22:15.04:209,15,0	0/0:5,0:16:21.07:0,21,758	0/0:14,0:14:5.65:0,6,196	0/0:22,0:22:18.06:0,18,658	0/0:12,0:18:24.08:0,24,768	0/0:4,0:6:9.02:0,9,140	1/1:18,10:29:24.08:581,24,0	0/1:4,1:8:99:225,0,102
chr10	45240595	.	G	GA	4415.76	PASS	AB=0.929;AC=17;AF=0.304;AN=56;BaseQRankSum=-11.248;DP=585;FS=9.687;HRun=9;HaplotypeScore=55.7117;InbreedingCoeff=0.8894;MQ=74.82;MQ0=0;MQRankSum=-1.466;QD=22.53;ReadPosRankSum=2.023;VQSLOD=5.4584;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,31:37:66.25:990,66,0	0/0:10,0:10:26.97:0,27,232	0/1:12,1:13:9.76:10,0,132	0/0:9,0:8:12:0,12,104	0/0:26,0:25:68.98:0,69,598	0/0:18,0:18:41.99:0,42,365	0/0:19,0:19:50.96:0,51,438	0/0:40,0:40:89.66:0,90,776	1/1:3,12:15:36.10:397,36,0	0/0:20,0:21:49.98:0,50,422	0/0:17,0:17:44.93:0,45,383	1/1:6,20:27:30.93:552,31,0	1/1:4,19:23:48.13:528,48,0	1/1:4,21:25:57.15:630,57,0	0/0:18,0:18:50.99:0,51,443	0/0:22,1:23:29.79:0,30,483	0/0:25,1:26:32.79:0,33,513	0/0:8,0:8:20.99:0,21,182	0/0:14,0:15:41.02:0,41,342	0/0:28,0:28:49.20:0,49,553	0/0:15,0:15:41.98:0,42,365	1/1:8,16:25:47.96:512,48,0	1/1:2,15:17:39.11:431,39,0	1/1:1,13:14:33.09:365,33,0	0/0:23,0:23:59.97:0,60,519	0/0:22,1:23:26.86:0,27,462	0/0:35,1:35:50.76:0,51,665	0/0:13,1:14:2.81:0,3,253
chr10	45240979	.	G	GA	3427.78	PASS	AB=0.793;AC=37;AF=0.661;AN=56;BaseQRankSum=-2.337;DP=558;FS=2.266;HRun=14;HaplotypeScore=77.2109;InbreedingCoeff=0.4192;MQ=57.31;MQ0=6;MQRankSum=0.120;QD=7.58;ReadPosRankSum=-1.334;VQSLOD=2.6225;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:12,1:37:15.25:154,15,0	1/1:3,1:7:5.68:28,6,0	0/0:8,0:7:9.06:0,9,41	0/1:8,0:7:2.32:2,0,28	1/1:9,3:20:25.97:157,26,0	1/1:6,9:15:10.57:206,11,0	1/1:13,14:25:2.57:291,3,0	1/1:10,18:29:26.11:342,26,0	0/1:11,12:23:28.63:172,0,29	0/0:19,1:22:33.40:0,33,204	0/0:14,0:12:19.68:0,20,121	1/1:9,13:22:24:210,24,0	1/1:7,16:22:8.17:186,8,0	1/1:7,13:20:14.95:124,15,0	0/1:12,0:11:12.01:12,0,46	0/0:18,0:20:25.60:0,26,159	0/0:26,1:29:26.98:0,27,280	0/0:10,0:12:18.80:0,19,108	1/1:5,1:15:24.34:136,24,0	1/1:5,4:23:29.04:178,29,0	1/1:13,2:15:13.19:106,13,0	1/1:13,8:22:12.38:233,12,0	0/1:11,13:25:11.71:177,0,12	1/1:4,22:27:41.22:389,41,0	0/1:16,1:20:19.07:19,0,118	0/1:9,11:20:5.63:186,0,6	0/1:7,2:17:20.98:52,0,21	1/1:10,2:16:8.82:67,9,0
chr10	45241131	.	TCCTCTCTCTCTC	T	2942.73	PASS	AB=1.000;AC=41;AF=0.788;AN=52;BaseQRankSum=-4.588;DP=519;FS=11.129;HRun=0;HaplotypeScore=167.5660;InbreedingCoeff=0.1280;MQ=75.15;MQ0=17;MQRankSum=0.955;QD=6.36;ReadPosRankSum=3.596;VQSLOD=1.8075;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:29:32.96:288,33,0	0/1:7,0:7:10.07:83,0,10	0/1:25,0:18:5.06:37,0,5	0/1:42,0:19:10.82:11,0,39	1/1:17,2:19:11.98:99,12,0	1/1:19,0:18:31.15:268,31,0	1/1:31,0:29:18.37:147,18,0	1/1:34,0:33:24.01:219,24,0	./.	1/1:16,1:16:11.83:221,12,0	0/1:15,0:15:0:0,0,0	./.	0/1:16,0:13:27.75:86,0,28	0/0:17,0:17:2.24:0,2,8	1/1:11,2:13:3.96:21,4,0	1/1:24,0:24:2.83:17,3,0	0/0:12,0:11:14.91:0,15,308	1/1:8,0:6:3.01:34,3,0	1/1:11,0:10:8.99:129,9,0	1/1:19,0:19:32.93:272,33,0	1/1:18,1:17:5.99:48,6,0	1/1:21,0:20:26.97:227,27,0	1/1:20,0:19:1.25:3,1,0	0/1:20,0:19:91.93:92,0,162	1/1:11,0:11:21:190,21,0	0/1:16,0:14:86.66:87,0,195	1/1:21,1:21:38.88:477,39,0	1/1:5,0:5:3:25,3,0
chr10	45241144	.	CCTCTCTCTCTCCCT	C	2413.32	PASS	AB=0.998;AC=36;AF=0.667;AN=54;BaseQRankSum=-5.757;DP=542;FS=17.852;HRun=0;HaplotypeScore=163.4757;InbreedingCoeff=-0.0808;MQ=56.95;MQ0=42;MQRankSum=2.122;QD=4.96;ReadPosRankSum=2.206;VQSLOD=1.5328;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:28:30.63:235,31,0	0/1:7,0:7:52.85:53,0,57	0/1:18,0:11:5.06:37,0,5	0/1:32,0:9:10.82:11,0,39	1/1:19,2:18:11.98:99,12,0	1/1:19,0:17:1.39:147,1,0	0/1:31,0:25:6.53:101,0,7	1/1:28,0:25:23.27:218,23,0	./.	0/1:17,0:16:18.38:150,0,18	0/1:16,0:15:0:0,0,0	1/1:15,0:15:1.55:4,2,0	0/1:23,0:16:75.18:82,0,75	0/0:19,0:18:2.86:0,3,24	0/1:16,0:14:9.02:11,0,9	0/1:25,0:25:11.57:12,0,12	0/0:20,0:16:20.60:0,21,483	0/1:13,0:9:0.09:0,0,101	1/1:8,0:7:11.96:124,12,0	1/1:17,1:18:32.93:273,33,0	1/1:21,0:15:5.99:48,6,0	1/1:20,0:19:26.97:227,27,0	1/1:24,0:21:1.25:3,1,0	0/1:25,0:23:90.25:90,0,309	1/1:12,0:11:15.53:115,16,0	0/1:14,0:11:86.58:87,0,309	0/1:29,1:28:4.87:419,0,5	0/1:6,0:6:11.95:18,0,12
chr10	45241146	.	TCTCTCTCTCC	T	3411.30	PASS	AB=0.959;AC=39;AF=0.722;AN=54;BaseQRankSum=-4.896;DP=562;FS=11.068;HRun=0;HaplotypeScore=138.2784;InbreedingCoeff=0.0258;MQ=55.58;MQ0=45;MQRankSum=3.387;QD=6.73;ReadPosRankSum=3.027;VQSLOD=2.0849;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:28:31.39:334,31,0	1/1:8,0:8:12.99:147,13,0	0/1:18,0:11:5.06:37,0,5	0/1:31,0:8:10.82:11,0,39	1/1:21,0:18:11.98:99,12,0	1/1:21,0:19:33.02:387,33,0	1/1:33,0:26:20.21:170,20,0	1/1:33,0:30:26.49:226,26,0	./.	1/1:5,11:15:17.55:267,18,0	0/1:16,0:15:0:0,0,0	0/0:17,0:17:0.47:0,0,1	0/1:22,0:15:0.06:108,0,0	1/1:20,0:19:1.82:5,2,0	1/1:6,10:14:4.92:34,5,0	0/1:4,20:24:12.04:12,0,12	0/0:21,0:17:20.14:0,20,384	0/1:16,0:12:78.61:80,0,79	0/1:7,0:6:6.10:93,0,6	1/1:20,0:19:32.93:273,33,0	1/1:24,0:18:5.66:47,6,0	1/1:21,0:20:26.97:227,27,0	1/1:24,0:21:0.89:2,1,0	0/1:25,0:23:38.89:114,0,39	1/1:14,0:13:20.59:264,21,0	0/1:15,0:12:85.77:92,0,86	0/1:27,0:25:46.55:362,0,47	0/1:7,0:6:5.10:20,0,5
chr10	45241148	.	TCTCTCTCC	T	3793.65	PASS	AB=0.956;AC=43;AF=0.796;AN=54;BaseQRankSum=-2.701;DP=558;FS=2.648;HRun=0;HaplotypeScore=123.2099;InbreedingCoeff=0.0493;MQ=52.94;MQ0=49;MQRankSum=4.387;QD=7.30;ReadPosRankSum=5.444;VQSLOD=2.1233;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:29:29.32:374,29,0	1/1:7,0:7:15.17:184,15,0	0/1:16,0:9:5.06:37,0,5	0/1:30,0:8:10.82:11,0,39	1/1:22,0:19:11.98:99,12,0	1/1:21,1:20:33.03:493,33,0	1/1:31,1:24:13.47:184,13,0	1/1:32,0:29:5.12:192,5,0	./.	1/1:17,0:16:17.67:260,18,0	0/1:5,10:14:0:0,0,0	1/1:17,0:17:1.55:4,2,0	1/1:20,0:14:17.16:133,17,0	1/1:20,0:19:2.99:23,3,0	1/1:15,0:13:5.18:35,5,0	0/1:25,0:25:12.27:12,0,31	0/0:21,0:17:19.96:0,20,335	0/1:16,0:11:81.27:81,0,87	0/1:8,0:7:8.67:73,0,9	1/1:20,0:19:30.19:268,30,0	1/1:23,0:17:5.70:47,6,0	1/1:20,0:19:26.97:227,27,0	1/1:23,0:20:0.89:2,1,0	1/1:26,0:23:28.81:220,29,0	1/1:16,0:14:20.73:339,21,0	0/1:16,0:13:14.85:153,0,15	0/1:25,0:23:99:324,0,105	0/1:7,0:6:10.52:19,0,11
chr10	45241150	.	TCTCTCC	T	3747.96	PASS	AB=1.000;AC=43;AF=0.796;AN=54;BaseQRankSum=-2.288;DP=549;FS=1.559;HRun=0;HaplotypeScore=107.5825;InbreedingCoeff=0.0325;MQ=52.22;MQ0=52;MQRankSum=5.041;QD=7.32;ReadPosRankSum=4.868;VQSLOD=1.9795;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:28:27.45:323,27,0	1/1:7,0:7:15.16:160,15,0	0/1:16,0:9:5.06:37,0,5	0/1:31,0:8:10.82:11,0,39	1/1:21,0:18:11.98:99,12,0	1/1:23,0:20:33.01:376,33,0	1/1:31,0:23:8.26:195,8,0	0/1:32,0:29:41.23:212,0,41	./.	1/1:16,0:15:17.88:187,18,0	0/1:12,0:11:0:0,0,0	1/1:19,0:19:2.97:20,3,0	1/1:19,0:13:17.95:158,18,0	1/1:20,0:19:3.01:39,3,0	1/1:15,0:13:5.44:35,5,0	0/1:25,0:24:12:12,0,32	0/0:21,0:17:19.44:0,19,264	0/1:16,0:10:55.64:56,0,84	0/1:9,0:8:37.99:79,0,38	1/1:19,0:18:26.68:264,27,0	1/1:23,0:17:5.60:47,6,0	1/1:13,5:17:26.97:227,27,0	1/1:7,15:19:0.47:1,0,0	1/1:26,0:23:32.52:365,33,0	1/1:16,0:14:20.86:269,21,0	1/1:15,0:12:25.31:260,25,0	0/1:25,0:23:97.30:288,0,97	0/1:7,0:6:9.26:29,0,9
chr10	45241152	.	TCTCC	T	3786.97	PASS	AB=0.990;AC=44;AF=0.815;AN=54;BaseQRankSum=-1.748;DP=541;FS=0.000;HRun=0;HaplotypeScore=96.3864;InbreedingCoeff=0.0239;MQ=50.34;MQ0=55;MQRankSum=4.944;QD=7.53;ReadPosRankSum=5.066;VQSLOD=1.9045;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:25:26.78:302,27,0	1/1:7,0:7:15.44:150,15,0	0/1:11,0:5:5.05:37,0,5	0/1:26,0:7:10.82:11,0,39	1/1:23,0:20:11.98:99,12,0	1/1:21,0:18:33:338,33,0	1/1:30,0:22:8.01:172,8,0	0/1:31,0:28:76.75:232,0,77	./.	1/1:15,0:14:17.04:149,17,0	0/1:12,0:11:0:0,0,0	1/1:1,17:18:3.01:38,3,0	1/1:21,0:15:20.54:201,21,0	1/1:2,17:18:3.01:49,3,0	1/1:15,0:13:5.70:35,6,0	0/1:25,0:24:12.03:12,0,32	0/0:22,0:18:4.46:0,4,193	0/1:16,0:10:42.38:42,0,56	0/1:10,0:9:25.11:92,0,25	1/1:17,0:16:26.62:264,27,0	1/1:25,0:17:5.30:47,5,0	1/1:19,0:18:26.97:227,27,0	1/1:21,0:18:0.47:1,0,0	1/1:25,0:22:32.62:379,33,0	1/1:15,0:13:20.86:227,21,0	1/1:17,1:14:40.90:382,41,0	0/1:27,0:25:64.66:257,0,65	1/1:8,0:6:3.59:46,4,0
chr10	45241199	.	CTGTGTGTGTGTG	C	1267.88	PASS	AB=0.792;AC=11;AF=0.220;AN=50;BaseQRankSum=4.643;DP=574;FS=12.214;HRun=0;HaplotypeScore=157.4677;InbreedingCoeff=0.6716;MQ=39.47;MQ0=48;MQRankSum=-5.479;QD=10.84;ReadPosRankSum=1.838;VQSLOD=2.2111;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:28:15.05:0,15,713	0/0:5,0:5:6.02:0,6,106	./.	./.	1/1:15,6:22:0.47:1,0,0	1/1:17,6:18:11.97:292,12,0	0/0:23,3:21:2.03:0,2,5	./.	0/0:30,0:28:45.15:0,45,1327	0/0:22,0:20:24.01:0,24,887	0/0:14,0:14:18.06:0,18,858	0/0:24,0:24:33.11:0,33,1295	0/0:22,0:19:38.89:0,39,1135	0/0:33,0:31:33.11:0,33,1327	0/0:29,0:29:19.42:0,19,876	0/0:26,0:24:34.38:0,34,1269	0/0:26,0:22:23.11:0,23,922	0/0:23,0:15:14.98:0,15,530	1/1:10,1:12:5.44:197,5,0	1/1:11,1:15:2.79:53,3,0	0/0:23,0:19:2.13:0,2,5	0/0:18,0:15:12.04:0,12,542	0/0:20,0:16:12.04:0,12,503	0/0:25,0:19:21.07:0,21,823	0/0:22,0:20:18.06:0,18,898	0/1:14,1:18:2.76:366,0,3	1/1:12,6:20:15.05:496,15,0	0/0:12,0:9:0:0,0,0
chr10	45242105	.	TA	T	1167.73	PASS	AB=0.909;AC=13;AF=0.232;AN=56;BaseQRankSum=5.711;DP=476;FS=5.338;HRun=12;HaplotypeScore=52.4175;InbreedingCoeff=0.7165;MQ=67.70;MQ0=0;MQRankSum=-0.008;QD=11.45;ReadPosRankSum=1.108;VQSLOD=3.0711;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,2:34:63.94:0,64,826	0/0:11,0:11:21.04:0,21,213	0/0:26,0:14:11.82:0,12,140	0/0:17,0:9:5.53:0,6,23	0/0:26,0:26:37.81:0,38,543	0/0:20,1:20:33.88:0,34,525	0/0:12,0:12:3.90:0,4,220	0/0:27,1:28:39.50:0,39,555	0/0:6,0:6:18:0,18,172	1/1:5,11:16:32.84:252,33,0	1/1:4,12:16:32.86:255,33,0	0/0:9,1:10:4.07:0,4,216	0/0:14,0:14:34.52:0,35,307	0/0:14,0:15:29.07:0,29,313	1/1:2,15:17:2.43:202,2,0	1/1:0,9:9:20.92:163,21,0	0/0:25,0:25:62.86:0,63,601	1/1:1,9:10:0:98,0,0	0/0:11,0:11:27.03:0,27,263	0/0:26,0:26:16.85:0,17,516	0/0:6,0:6:15.03:0,15,152	0/0:6,0:6:15.03:0,15,152	0/1:9,1:10:2.23:2,0,146	0/0:13,0:12:33.03:0,33,321	1/1:6,18:24:47.71:362,48,0	0/0:19,1:20:1.96:0,2,358	0/0:25,0:25:60.09:0,60,595	0/0:22,0:22:48.10:0,48,487
chr10	45242350	.	T	TA	4501.12	PASS	AB=0.857;AC=21;AF=0.375;AN=56;BaseQRankSum=-0.550;DP=415;FS=8.054;HRun=0;HaplotypeScore=89.2218;InbreedingCoeff=0.9058;MQ=73.92;MQ0=0;MQRankSum=0.205;QD=25.01;ReadPosRankSum=1.240;VQSLOD=5.2901;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:41.69:0,42,330	0/1:5,1:6:15.62:16,0,59	0/0:14,0:11:25.24:0,25,352	0/0:20,0:18:29.84:0,30,418	1/1:1,12:13:35.88:390,36,0	1/1:1,14:15:38.89:420,39,0	1/1:1,13:14:32.87:353,33,0	1/1:5,14:19:36.47:410,36,0	0/0:19,0:19:48.95:0,49,306	0/0:14,0:14:42.13:0,42,572	0/0:11,0:11:30.10:0,30,413	0/0:24,0:24:63.57:0,64,412	0/0:14,0:14:35.50:0,36,219	0/0:18,0:18:29.51:0,30,296	0/0:19,0:19:57.15:0,57,774	0/0:13,0:13:39.13:0,39,537	0/0:12,0:12:36.12:0,36,503	0/0:6,0:6:12.04:0,12,168	1/1:5,24:29:45.02:764,45,0	1/1:3,8:10:20.51:217,21,0	1/1:6,24:30:73.45:803,73,0	0/0:4,0:4:11.70:0,12,72	0/0:3,0:3:8.73:0,9,50	0/0:10,0:10:29.32:0,29,190	0/0:11,0:11:30.10:0,30,419	1/1:4,14:18:39.90:453,40,0	1/1:2,15:17:40.75:450,41,0	1/1:1,7:8:21.05:226,21,0
chr10	45244053	.	T	TA	2255.70	PASS	AB=0.848;AC=37;AF=0.685;AN=54;BaseQRankSum=-0.566;DP=227;FS=5.120;HRun=9;HaplotypeScore=36.8019;InbreedingCoeff=0.4952;MQ=73.42;MQ0=19;MQRankSum=0.401;QD=13.51;ReadPosRankSum=-0.779;VQSLOD=2.4664;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:1,5:6:7.97:148,0,8	1/1:0,2:2:6.02:66,6,0	0/1:27,0:9:5.82:6,0,73	0/1:35,0:10:12.57:13,0,29	1/1:0,3:3:6.02:66,6,0	1/1:3,7:10:15.04:166,15,0	1/1:1,4:5:6.02:65,6,0	1/1:4,16:17:44.71:474,45,0	1/1:0,2:2:6.02:66,6,0	0/0:0,0:6:12.22:0,12,36	0/0:0,0:1:2.04:0,2,6	1/1:2,1:2:6.02:66,6,0	1/1:0,4:4:6.02:66,6,0	1/1:3,2:5:15.04:166,15,0	0/0:1,0:1:2.04:0,2,6	0/0:0,0:4:4.05:0,4,12	0/0:24,0:24:65.82:0,66,571	0/0:1,0:18:28.52:0,29,83	1/1:1,7:7:21.06:232,21,0	./.	1/1:4,6:9:8.30:127,8,0	1/1:2,0:2:6.02:66,6,0	1/1:0,2:2:6.02:66,6,0	1/1:1,1:2:3.01:33,3,0	0/0:0,0:6:8.15:0,8,24	1/1:0,7:7:21.06:232,21,0	1/1:1,3:4:9.02:100,9,0	1/1:1,9:10:18.05:199,18,0
chr10	45246321	.	C	CT	15592.56	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=-17.679;DP=742;FS=0.277;HRun=3;HaplotypeScore=64.1820;InbreedingCoeff=0.9952;MQ=75.45;MQ0=0;MQRankSum=-1.313;QD=37.13;ReadPosRankSum=0.592;VQSLOD=5.2188;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,123,1461	0/0:4,0:4:12.04:0,12,143	0/0:14,0:14:42.10:0,42,489	0/0:17,0:17:51.02:0,51,562	1/1:0,9:9:27.05:356,27,0	1/1:0,20:20:54.18:756,54,0	1/1:3,48:50:99:1680,120,0	1/1:0,17:17:51.14:665,51,0	0/0:27,0:27:78.24:0,78,936	1/1:3,30:33:90.28:1229,90,0	1/1:1,14:15:42.14:588,42,0	0/0:51,0:51:99:0,144,1703	0/0:20,0:20:57.17:0,57,684	0/0:42,0:42:99:0,123,1462	1/1:0,27:27:78.26:1092,78,0	1/1:0,21:21:60.20:840,60,0	0/0:43,0:43:99:0,114,1342	1/1:1,20:21:54.18:756,54,0	1/1:0,19:19:57.16:777,57,0	1/1:0,13:13:33.11:462,33,0	1/1:7,90:97:99:3570,256,0	0/0:11,0:11:33.06:0,33,380	0/0:11,0:11:30.09:0,30,360	0/0:40,0:40:99:0,111,1295	1/1:1,13:14:33.11:462,33,0	1/1:3,26:29:78.22:1055,78,0	1/1:2,22:24:66.22:924,66,0	1/1:0,10:10:27.09:378,27,0
chr10	45247322	.	C	CAAA	13920.07	PASS	AB=0.957;AC=29;AF=0.518;AN=56;BaseQRankSum=1.776;DP=551;FS=11.437;HRun=2;HaplotypeScore=82.4471;InbreedingCoeff=0.9346;MQ=81.20;MQ0=0;MQRankSum=-6.072;QD=54.80;ReadPosRankSum=3.238;VQSLOD=3.8520;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,18:19:57.20:1285,57,0	0/0:7,0:7:21.06:0,21,326	0/0:19,0:19:54.18:0,54,899	0/0:12,0:12:36.09:0,36,573	0/0:28,0:28:81.28:0,81,1351	0/0:29,0:29:84.29:0,84,1405	0/0:19,0:19:54.18:0,54,880	0/0:30,0:30:81.28:0,81,1350	1/1:1,10:11:33.11:749,33,0	1/1:5,13:20:54.15:1141,54,0	1/1:3,27:31:72.25:1661,72,0	1/1:3,13:18:39.13:859,39,0	1/1:1,13:14:42.11:906,42,0	1/1:0,14:14:39.13:860,39,0	1/1:2,18:20:60.21:1324,60,0	1/1:3,12:15:42.14:938,42,0	0/0:30,0:30:90.31:0,90,1498	1/1:2,16:18:48.16:1107,48,0	0/0:21,0:21:54.18:0,54,903	0/0:19,0:19:51.17:0,51,848	0/0:35,0:35:99:0,102,1706	1/1:0,10:10:30.10:681,30,0	1/1:3,17:21:45.15:1013,45,0	1/1:0,6:6:18.06:379,18,0	1/1:1,14:15:45.15:1008,45,0	0/1:21,1:22:9.02:9,0,873	0/0:29,0:28:84.27:0,84,1377	0/0:19,0:19:54.18:0,54,896
chr10	45247959	.	A	AAC	12123.82	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-17.853;DP=800;FS=1.264;HRun=0;HaplotypeScore=86.7116;InbreedingCoeff=0.9973;MQ=84.83;MQ0=1;MQRankSum=-2.469;QD=46.27;ReadPosRankSum=6.003;VQSLOD=6.3755;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,29:31:75.26:1375,75,0	0/0:12,0:12:36.12:0,36,516	0/0:31,0:31:90.25:0,90,1206	0/0:17,0:17:51.10:0,51,687	0/0:31,0:31:87.25:0,87,1191	0/0:36,0:36:99:0,102,1415	0/0:20,0:20:51.16:0,51,703	0/0:45,0:45:99:0,126,1775	1/1:3,28:31:78.27:1428,78,0	0/0:29,0:29:84.22:0,84,1149	0/0:14,0:14:42.13:0,42,583	1/1:1,44:46:99:2199,120,0	1/1:4,30:35:90.31:1643,90,0	1/1:0,37:38:99:1815,99,0	0/0:34,0:34:96.29:0,96,1352	0/0:39,0:39:99:0,114,1575	0/0:30,0:30:87.29:0,87,1239	0/0:14,0:14:42.14:0,42,602	0/0:25,0:25:72.23:0,72,1013	0/0:23,0:23:69.21:0,69,967	0/0:34,0:34:96.32:0,96,1370	1/1:1,20:21:57.19:1025,57,0	1/1:0,33:33:78.18:1430,78,0	1/1:1,25:25:66.23:1210,66,0	0/0:19,0:19:54.18:0,54,773	0/0:42,0:42:99:0,111,1590	0/0:37,0:37:99:0,108,1509	0/0:6,0:6:15.02:0,15,194
chr10	45249366	.	C	CT	9523.08	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-14.817;DP=709;FS=3.785;HRun=2;HaplotypeScore=66.4428;InbreedingCoeff=0.9964;MQ=80.17;MQ0=0;MQRankSum=-1.021;QD=35.94;ReadPosRankSum=0.191;VQSLOD=5.3014;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:84.26:0,84,1036	1/1:0,11:11:30.10:431,30,0	0/0:25,0:24:52.15:0,52,676	0/0:18,0:19:15.10:0,15,352	1/1:1,34:35:99:1363,99,0	1/1:2,25:27:66.22:949,66,0	1/1:1,17:18:42.13:587,42,0	1/1:1,38:39:99:1439,111,0	0/0:23,0:23:69.17:0,69,809	0/0:38,0:38:99:0,111,1344	0/0:25,0:25:75.18:0,75,864	0/0:30,0:30:81.23:0,81,975	0/0:21,0:21:63.18:0,63,757	0/0:15,0:15:42.09:0,42,476	0/0:26,0:26:72.23:0,72,891	0/0:40,0:40:99:0,113,1303	0/0:30,0:30:90.15:0,90,1027	0/0:23,0:23:69.20:0,69,838	1/1:2,20:22:56.90:685,57,0	1/1:2,28:30:77.91:974,78,0	1/1:2,13:15:27.08:371,27,0	0/0:27,0:27:78.24:0,78,953	0/0:29,0:29:87.16:0,87,1013	0/0:23,0:23:69.20:0,69,840	0/0:20,0:20:60.17:0,60,721	1/1:0,29:29:87.20:1172,87,0	1/1:0,32:33:90.30:1292,90,0	1/1:0,6:6:18.06:259,18,0
chr10	45252159	.	T	TA	5084.72	PASS	AB=0.929;AC=35;AF=0.625;AN=56;BaseQRankSum=-4.907;DP=522;FS=4.582;HRun=11;HaplotypeScore=69.7355;InbreedingCoeff=0.8935;MQ=71.21;MQ0=1;MQRankSum=0.198;QD=15.84;ReadPosRankSum=-2.016;VQSLOD=4.9616;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:19,1:20:14.34:0,14,294	1/1:1,3:4:6.01:61,6,0	0/0:10,0:10:13.54:0,14,74	0/1:12,1:11:12.35:12,0,54	1/1:2,2:15:34.63:203,35,0	1/1:3,0:17:39.77:200,40,0	1/1:5,1:15:8.30:134,8,0	1/1:7,20:27:36.86:547,37,0	0/0:20,0:20:44.76:0,45,343	1/1:4,16:20:48.10:487,48,0	1/1:6,13:19:13.64:292,14,0	0/0:24,0:24:50.75:0,51,392	0/0:23,0:23:59.74:0,60,461	0/0:20,0:20:44.79:0,45,345	1/1:2,20:22:24.86:434,25,0	1/1:0,14:14:36.07:365,36,0	0/0:16,0:16:35.83:0,36,276	1/1:3,17:20:24.86:434,25,0	1/1:4,2:16:37.40:226,37,0	1/1:3,0:13:25.68:133,26,0	1/1:3,1:21:37.25:212,37,0	0/0:16,0:16:29.37:0,29,218	0/0:20,0:20:44.78:0,45,348	0/0:31,0:31:80.65:0,81,620	1/1:4,13:17:33.07:335,33,0	1/1:6,21:27:39.87:578,40,0	1/1:3,3:26:51.46:289,51,0	1/1:3,0:13:28.41:143,28,0
chr10	45252325	.	AT	A	3526.07	PASS	AB=0.996;AC=20;AF=0.357;AN=56;BaseQRankSum=-14.025;DP=564;FS=4.951;HRun=4;HaplotypeScore=87.4041;InbreedingCoeff=0.3046;MQ=72.35;MQ0=0;MQRankSum=-1.948;QD=11.30;ReadPosRankSum=-3.269;VQSLOD=0.7819;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:19.05:0,19,184	0/0:5,0:5:12.08:0,12,41	0/0:17,0:14:6.86:0,7,265	0/0:18,0:15:13.90:0,14,189	0/1:28,1:29:99:126,0,113	0/1:30,0:30:63.37:63,0,164	0/1:12,0:12:13.85:14,0,56	0/1:24,0:24:57.77:58,0,75	0/0:11,0:11:2.85:0,3,59	1/1:1,17:18:51.07:575,51,0	1/1:1,26:27:69.07:791,69,0	0/1:34,0:34:22.13:22,0,159	0/0:20,0:20:25.87:0,26,133	0/1:19,0:19:55.73:56,0,82	1/1:5,14:19:51.15:602,51,0	1/1:1,14:15:36.11:430,36,0	0/0:21,0:21:60.15:0,60,783	1/1:2,11:13:27.08:323,27,0	0/0:21,0:21:16.22:0,16,100	0/1:32,0:32:24.15:24,0,155	0/0:18,0:18:17.83:0,18,127	0/0:19,0:19:17.36:0,17,109	0/0:19,0:19:4.01:0,4,105	0/0:21,0:21:50.57:0,51,188	1/1:3,12:15:33.10:395,33,0	0/1:25,0:25:46.57:47,0,112	0/0:16,0:15:18.39:0,18,162	0/0:18,0:18:5.53:0,6,103
chr10	45252502	.	T	TTTGGTTGGTTGG	22218.18	PASS	AB=1.000;AC=27;AF=0.482;AN=56;BaseQRankSum=6.134;DP=611;FS=1.408;HRun=0;HaplotypeScore=235.2238;InbreedingCoeff=0.4540;MQ=64.17;MQ0=9;MQRankSum=-12.384;QD=63.12;ReadPosRankSum=-6.179;VQSLOD=3.2182;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:66.22:0,66,2112	0/1:5,0:5:99:121,0,106	0/0:36,0:16:35.50:0,35,461	0/0:41,0:23:1.52:0,2,306	1/1:18,2:20:43.91:1178,44,0	1/1:16,10:26:69.13:2898,69,0	1/1:19,2:21:47.03:1490,47,0	1/1:42,0:42:92.05:1815,92,0	0/0:11,0:11:33.10:0,33,962	0/1:22,0:22:99:970,0,213	0/1:18,0:18:99:592,0,337	0/0:30,0:30:80.81:0,81,2138	0/0:17,0:17:44.87:0,45,1336	0/0:15,0:15:45.08:0,45,1085	0/1:22,0:22:99:1118,0,273	0/1:19,0:19:99:959,0,190	0/0:42,0:42:99:0,126,3780	0/1:18,0:18:99:652,0,345	1/1:21,3:23:5.98:1249,6,0	1/1:11,6:17:51.09:1723,51,0	1/1:18,1:19:37.52:795,38,0	0/0:13,0:13:36.12:0,36,1171	0/0:10,0:10:27.04:0,27,887	0/0:22,0:22:57.13:0,57,1698	0/1:19,0:19:99:903,0,130	1/1:24,5:29:82.98:2653,83,0	1/1:18,6:23:61.83:2305,62,0	1/1:3,4:7:16.93:797,17,0
chr10	45252518	.	T	TTTGTTTGGTTGG	18721.20	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=1.639;DP=628;FS=4.904;HRun=0;HaplotypeScore=238.5701;InbreedingCoeff=0.6279;MQ=64.21;MQ0=8;MQRankSum=-12.899;QD=52.59;ReadPosRankSum=2.640;VQSLOD=4.4350;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:75.14:0,75,2002	1/1:4,0:4:6:181,6,0	0/0:36,0:17:11.27:0,11,119	0/0:41,0:18:17.44:0,17,156	0/1:23,0:23:38.64:569,0,39	1/1:25,0:25:11.71:1675,12,0	0/1:24,0:24:28.79:546,0,29	0/1:36,0:36:13.48:355,0,13	0/0:15,0:15:33.06:0,33,740	1/1:15,5:20:51.15:1755,51,0	1/1:14,4:18:42.04:1196,42,0	0/0:32,0:32:47.63:0,48,1318	0/0:16,0:16:45:0,45,1308	0/0:14,0:14:30.09:0,30,886	1/1:18,8:26:69:2096,69,0	1/1:11,5:16:45.06:1670,45,0	0/0:36,0:36:93.22:0,93,2851	1/1:19,4:23:50.87:1409,51,0	0/1:26,0:23:16.01:724,0,16	0/1:20,0:20:0.44:1342,0,0	1/1:16,0:16:5.21:578,5,0	0/0:14,0:14:39.02:0,39,925	0/0:13,0:13:36.09:0,36,924	0/0:26,0:26:57.15:0,57,1646	1/1:8,7:15:39.09:1632,39,0	1/1:30,0:30:8.63:1171,9,0	1/1:26,0:25:21.34:1153,21,0	1/1:8,0:8:14.51:669,15,0
chr10	45252545	.	TG	T	9199.54	PASS	AB=0.986;AC=50;AF=0.926;AN=54;BaseQRankSum=2.275;DP=573;FS=0.614;HRun=9;HaplotypeScore=135.6841;InbreedingCoeff=0.6001;MQ=72.72;MQ0=4;MQRankSum=-3.785;QD=17.00;ReadPosRankSum=3.055;VQSLOD=3.6856;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,22:26:57.03:521,57,0	./.	0/1:44,0:28:2.60:3,0,234	0/1:33,1:16:13.89:14,0,158	1/1:4,18:22:50.96:451,51,0	1/1:7,21:28:54.01:494,54,0	1/1:6,18:24:48.02:439,48,0	1/1:4,20:24:58.92:496,59,0	1/1:1,15:16:36.01:329,36,0	1/1:4,13:17:39:351,39,0	1/1:3,8:11:26.35:213,26,0	1/1:4,21:25:53.88:494,54,0	1/1:3,16:19:45:406,45,0	1/1:2,10:12:27.01:247,27,0	1/1:2,20:22:60.03:548,60,0	1/1:3,15:18:36.01:329,36,0	0/0:30,1:31:50.79:0,51,838	1/1:1,19:20:48.03:438,48,0	1/1:6,13:17:35.94:314,36,0	1/1:5,12:18:37.90:311,38,0	1/1:2,15:17:32.86:281,33,0	1/1:1,7:9:26.05:225,26,0	1/1:3,11:14:33.01:302,33,0	1/1:5,21:26:48.02:439,48,0	1/1:4,10:14:32.50:283,32,0	1/1:8,16:24:56.82:506,57,0	1/1:3,20:23:57.02:518,57,0	1/1:1,14:15:27.01:247,27,0
chr10	45254190	.	A	AGAG	18049.61	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-17.778;DP=781;FS=1.923;HRun=0;HaplotypeScore=115.8840;InbreedingCoeff=1.0000;MQ=85.89;MQ0=0;MQRankSum=-5.414;QD=56.23;ReadPosRankSum=-0.848;VQSLOD=6.5763;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,102,1674	1/1:2,13:15:42.14:944,42,0	0/0:31,0:31:83.85:0,84,1314	0/0:28,0:28:78.26:0,78,1268	1/1:1,30:32:75.26:1697,75,0	1/1:5,31:36:90.31:2038,90,0	1/1:0,19:19:51.18:1156,51,0	1/1:8,31:40:99:2310,111,0	0/0:29,0:29:84.27:0,84,1374	0/0:32,0:32:84.29:0,84,1399	0/0:22,0:22:66.22:0,66,1087	0/0:26,0:26:75.24:0,75,1210	0/0:27,0:27:75.26:0,75,1237	0/0:27,0:27:72.23:0,72,1175	0/0:39,0:39:99:0,117,1912	0/0:29,0:29:84.29:0,84,1387	0/0:22,0:22:66.23:0,66,1093	0/0:19,0:19:51.14:0,51,821	1/1:6,14:21:57.17:1142,57,0	1/1:4,27:33:81.19:1732,81,0	1/1:1,26:29:72.25:1613,72,0	0/0:28,0:28:78.27:0,78,1299	0/0:27,0:27:75.24:0,75,1220	0/0:19,0:19:57.15:0,57,919	0/0:19,0:19:57.19:0,57,950	1/1:5,22:27:72.25:1620,72,0	1/1:3,48:51:99:2983,132,0	1/1:1,16:18:36.12:814,36,0
chr10	45254491	.	AC	A	1465.65	PASS	AB=0.935;AC=22;AF=0.393;AN=56;BaseQRankSum=-0.285;DP=377;FS=18.321;HRun=10;HaplotypeScore=71.6629;InbreedingCoeff=0.3923;MQ=81.43;MQ0=0;MQRankSum=-0.479;QD=7.55;ReadPosRankSum=4.808;VQSLOD=0.4388;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:22:26.75:0,27,224	1/1:3,0:6:8.15:24,8,0	0/0:13,0:12:17.78:0,18,177	0/0:25,0:24:6.60:0,7,199	0/1:12,1:13:4.99:5,0,169	0/0:11,0:12:11.82:0,12,100	0/0:11,0:11:8.92:0,9,63	0/0:16,0:16:12.03:0,12,132	0/0:9,0:9:21:0,21,209	1/1:6,7:14:23.02:188,23,0	1/1:2,5:7:11.99:104,12,0	0/1:13,0:13:33.87:34,0,107	0/0:7,0:7:15:0,15,152	0/1:7,0:7:10.90:11,0,44	1/1:10,13:22:44.97:389,45,0	1/1:4,17:20:56.98:493,57,0	0/1:22,2:24:2.81:3,0,379	1/1:1,7:8:20.99:182,21,0	0/1:9,1:10:22.43:22,0,167	0/0:11,0:11:24.06:0,24,263	0/0:20,0:20:23.99:0,24,230	0/1:8,1:9:17.02:17,0,57	0/1:13,1:14:28.33:28,0,137	0/0:17,0:17:10.08:0,10,299	1/1:5,4:9:14.49:150,14,0	0/0:11,0:11:9.02:0,9,100	0/1:14,2:16:5.98:6,0,322	0/0:8,0:8:15.04:0,15,165
chr10	45254527	.	TTCTC	T	6620.01	PASS	AB=1.000;AC=35;AF=0.625;AN=56;BaseQRankSum=2.963;DP=374;FS=13.659;HRun=0;HaplotypeScore=115.9578;InbreedingCoeff=0.7486;MQ=59.95;MQ0=1;MQRankSum=-6.351;QD=31.98;ReadPosRankSum=0.290;VQSLOD=4.1365;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,16:18:49.88:803,50,0	1/1:4,0:4:5.97:58,6,0	0/0:33,0:17:39.09:0,39,737	0/0:35,0:19:33.92:0,34,600	1/1:7,0:8:18.06:227,18,0	1/1:5,0:5:15.01:176,15,0	1/1:15,0:15:42.11:522,42,0	1/1:22,0:22:39.03:622,39,0	1/1:2,7:9:27.08:477,27,0	0/0:9,0:9:27.04:0,27,522	0/0:7,0:7:18.06:0,18,362	1/1:0,7:7:15.02:246,15,0	1/1:3,6:9:27.08:462,27,0	1/1:2,3:5:12.03:196,12,0	0/0:19,0:18:51.09:0,51,953	0/0:18,0:17:42.01:0,42,716	0/0:26,0:26:69.24:0,69,1796	0/0:9,0:9:26.98:0,27,481	0/1:7,0:7:27.35:27,0,65	0/1:13,0:13:10.76:370,0,11	1/1:11,0:12:27.26:221,27,0	1/1:6,10:16:47.91:657,48,0	1/1:1,7:8:18.02:303,18,0	1/1:6,6:12:17.80:325,18,0	0/0:11,0:11:32.41:0,32,617	1/1:8,0:8:23.40:250,23,0	1/1:17,0:17:21.08:472,21,0	0/1:11,0:11:19.01:205,0,19
chr10	45254531	.	CTCTT	C	7469.14	PASS	AB=1.000;AC=37;AF=0.661;AN=56;BaseQRankSum=0.821;DP=388;FS=20.945;HRun=0;HaplotypeScore=115.9548;InbreedingCoeff=0.8508;MQ=55.58;MQ0=2;MQRankSum=-5.437;QD=35.40;ReadPosRankSum=0.835;VQSLOD=3.1590;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:18:43.81:489,44,0	1/1:1,2:3:6.02:95,6,0	0/0:36,0:17:35.79:0,36,729	0/0:41,0:19:25.88:0,26,542	1/1:1,6:7:18.06:320,18,0	1/1:1,4:5:15.05:266,15,0	1/1:2,13:15:42.14:784,42,0	1/1:11,14:25:75.17:1224,75,0	1/1:9,0:9:24.06:287,24,0	0/0:9,0:9:24.08:0,24,434	0/0:8,0:8:20.86:0,21,358	0/1:8,0:8:10.48:129,0,10	1/1:10,0:10:26.42:291,26,0	1/1:5,0:5:9.02:108,9,0	0/0:18,0:17:48.14:0,48,713	0/0:19,0:18:50.41:0,50,628	0/0:25,0:25:72.25:0,72,1890	0/0:9,0:9:24.08:0,24,434	1/1:2,4:6:9:117,9,0	1/1:5,10:15:36.11:634,36,0	1/1:4,9:12:29.90:403,30,0	1/1:16,0:16:24.04:312,24,0	1/1:8,0:8:16.28:186,16,0	1/1:12,0:12:0.55:180,1,0	0/0:11,0:11:32.47:0,32,489	1/1:2,6:8:24.07:407,24,0	1/1:5,11:16:45.15:786,45,0	1/1:7,5:12:30.05:450,30,0
chr10	45254541	.	TTC	T	1956.27	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-3.860;DP=399;FS=1.287;HRun=0;HaplotypeScore=130.4249;InbreedingCoeff=0.9374;MQ=57.24;MQ0=2;MQRankSum=-2.794;QD=31.55;ReadPosRankSum=0.246;VQSLOD=5.4711;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:45.14:0,45,663	0/0:2,0:2:5.97:0,6,46	0/0:45,0:21:37.12:0,37,479	0/0:55,0:25:29.19:0,29,425	0/0:8,0:8:15.74:0,16,159	0/0:6,0:6:14.74:0,15,117	0/0:16,0:16:47.95:0,48,438	0/0:24,0:24:69.53:0,70,804	0/0:8,0:8:24.08:0,24,350	1/1:3,4:7:18.05:227,18,0	1/1:4,4:8:18.03:206,18,0	0/0:7,0:7:21.04:0,21,319	0/0:13,0:13:33.11:0,33,478	0/0:5,0:5:11.99:0,12,153	1/1:1,13:13:36.12:513,36,0	1/1:1,12:12:33.11:469,33,0	0/0:29,0:29:81.23:0,81,1426	1/1:4,5:9:24.03:296,24,0	0/0:3,0:3:6.49:0,6,96	0/0:12,0:12:33.41:0,33,290	0/0:15,0:14:24.04:0,24,293	0/0:15,0:15:42.14:0,42,677	0/0:10,0:10:23.90:0,24,345	0/0:10,0:10:13.60:0,14,192	1/1:1,10:11:31.35:430,31,0	0/0:9,0:9:27:0,27,295	0/0:16,0:16:47.76:0,48,451	0/0:9,0:9:23.99:0,24,272
chr10	45254555	.	T	TTC	11374.92	PASS	AB=1.000;AC=51;AF=0.911;AN=56;BaseQRankSum=3.743;DP=436;FS=3.784;HRun=0;HaplotypeScore=105.9123;InbreedingCoeff=0.8025;MQ=56.02;MQ0=10;MQRankSum=-5.388;QD=32.59;ReadPosRankSum=1.048;VQSLOD=7.2138;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,14:18:45.15:803,45,0	1/1:2,2:4:9.03:154,9,0	0/0:56,0:17:29.86:0,30,354	0/1:67,0:22:0.03:0,0,354	1/1:2,8:10:20.92:310,21,0	1/1:1,5:6:15.05:274,15,0	1/1:0,19:19:57.20:1041,57,0	1/1:6,21:26:63.17:1108,63,0	1/1:3,7:10:18.06:329,18,0	1/1:2,5:7:21.06:338,21,0	1/1:1,3:4:9.03:162,9,0	1/1:3,4:7:15.05:272,15,0	1/1:1,11:12:30.10:545,30,0	1/1:1,5:6:12.04:201,12,0	1/1:7,9:15:36.08:567,36,0	1/1:3,10:12:27.09:492,27,0	0/0:30,0:30:84.22:0,84,1112	1/1:2,5:7:15.05:274,15,0	1/1:2,2:4:9.02:138,9,0	1/1:3,11:14:32.85:524,33,0	1/1:5,9:13:24.08:387,24,0	1/1:1,13:14:39.13:691,39,0	1/1:4,7:11:14.87:255,15,0	1/1:2,11:13:21.07:365,21,0	1/1:2,9:12:30.57:513,31,0	1/1:1,9:11:30.09:519,30,0	1/1:1,12:13:36.12:619,36,0	1/1:0,9:9:27.09:494,27,0
chr10	45254669	.	GGTGTGTGT	G	1007.20	PASS	AB=0.917;AC=14;AF=0.259;AN=54;BaseQRankSum=1.931;DP=446;FS=4.843;HRun=0;HaplotypeScore=164.6236;InbreedingCoeff=0.6526;MQ=52.68;MQ0=9;MQRankSum=-3.370;QD=10.60;ReadPosRankSum=-1.729;VQSLOD=2.3810;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:24:6:0,6,160	./.	0/0:24,0:13:1.82:0,2,5	0/0:33,0:16:6.02:0,6,182	0/1:8,2:10:0.30:0,0,0	1/1:9,5:15:3.01:75,3,0	1/1:15,4:19:8.05:219,8,0	0/0:13,0:12:0.47:0,0,1	0/0:9,0:17:24.08:0,24,741	0/0:15,0:15:24.55:0,25,718	0/0:13,0:14:0.47:0,0,1	0/0:6,0:12:14.98:0,15,436	0/0:7,0:10:18.02:0,18,384	0/0:12,0:14:18.05:0,18,493	0/0:6,0:11:12.03:0,12,339	0/0:14,0:14:24.08:0,24,721	0/0:20,0:35:66.14:0,66,1210	0/0:11,0:13:21.07:0,21,764	1/1:13,1:14:6.01:101,6,0	1/1:4,2:6:9.02:175,9,0	0/0:28,1:28:0.47:0,0,1	0/0:11,0:15:6.49:0,6,215	0/0:10,0:11:9.38:0,9,219	0/0:25,0:29:2.98:0,3,124	0/0:10,0:14:9.03:0,9,281	1/1:10,3:13:15.05:337,15,0	1/1:7,3:11:12.51:250,13,0	0/1:4,0:3:0:0,0,0
chr10	45254711	.	T	TGTGTGC	2699.99	PASS	AB=0.981;AC=29;AF=0.558;AN=52;BaseQRankSum=-6.462;DP=433;FS=13.924;HRun=0;HaplotypeScore=190.4512;InbreedingCoeff=-0.3968;MQ=42.33;MQ0=15;MQRankSum=0.771;QD=7.92;ReadPosRankSum=-3.248;VQSLOD=1.2842;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:29:32.05:32,0,176	1/1:4,0:4:5.96:45,6,0	./.	./.	1/1:9,0:8:14.94:118,15,0	0/1:15,0:15:6.36:88,0,6	1/1:24,0:23:5.09:175,5,0	1/1:15,0:11:26.47:180,26,0	0/1:19,0:18:98.99:264,0,99	0/1:14,0:14:99:334,0,152	0/0:11,0:11:2.91:0,3,25	0/1:18,0:16:77.48:152,0,77	0/1:14,0:14:63.87:283,0,64	0/1:18,0:19:61.76:256,0,62	0/1:15,0:15:29.13:29,0,116	0/1:13,0:14:97.55:229,0,98	0/0:38,0:36:98.63:0,99,1255	0/1:12,0:12:86.53:87,0,185	0/1:13,0:12:20.30:73,0,20	0/1:11,0:8:17.49:50,0,17	1/1:32,0:31:14.86:125,15,0	0/1:16,0:16:30.65:31,0,84	0/1:10,0:10:51.84:99,0,52	0/0:23,1:24:20.91:0,21,218	0/1:9,3:12:34.17:34,0,54	0/1:15,0:13:94.42:127,0,94	0/1:8,0:8:32.12:32,0,84	1/1:2,0:1:2.90:16,3,0
chr10	45254744	.	GA	G	9847.10	PASS	AB=0.909;AC=55;AF=0.982;AN=56;BaseQRankSum=0.155;DP=386;FS=4.435;HRun=2;HaplotypeScore=131.9946;InbreedingCoeff=-0.0302;MQ=67.42;MQ0=0;MQRankSum=1.340;QD=25.51;ReadPosRankSum=4.564;VQSLOD=4.7032;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:26:29.26:371,29,0	1/1:3,0:3:9.03:111,9,0	1/1:6,2:8:21.07:260,21,0	0/1:9,1:8:36.24:149,0,36	1/1:10,0:10:23.96:240,24,0	1/1:13,0:13:27.08:334,27,0	1/1:34,0:34:72.94:876,73,0	1/1:14,0:14:36.57:422,37,0	1/1:16,0:16:35.55:411,36,0	1/1:11,0:11:26.86:334,27,0	1/1:6,0:6:4.88:72,5,0	1/1:11,2:13:36.07:433,36,0	1/1:9,0:9:24.03:278,24,0	1/1:11,0:11:20.53:263,21,0	1/1:18,0:18:39.96:461,40,0	1/1:17,0:17:44.91:533,45,0	1/1:31,0:31:78.24:948,78,0	1/1:16,0:16:39.06:451,39,0	1/1:9,0:9:21.07:258,21,0	1/1:10,0:10:24.07:292,24,0	1/1:35,0:35:47.98:589,48,0	1/1:10,0:10:24.07:294,24,0	1/1:5,0:5:12.04:146,12,0	1/1:23,0:23:44.27:527,44,0	1/1:8,0:8:21.06:256,21,0	1/1:10,0:10:24.55:293,25,0	1/1:7,0:7:12.04:150,12,0	1/1:3,0:3:8.99:94,9,0
chr10	45256389	.	A	ACC	399.12	PASS	AB=0.905;AC=9;AF=0.161;AN=56;BaseQRankSum=1.937;DP=635;FS=37.151;HRun=0;HaplotypeScore=125.5502;InbreedingCoeff=-0.1913;MQ=46.44;MQ0=39;MQRankSum=-3.067;QD=2.22;ReadPosRankSum=-1.298;VQSLOD=0.6944;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:39,0:40:82.51:83,0,375	0/1:10,0:10:39.99:40,0,187	0/0:26,0:5:11.76:0,12,76	0/0:18,0:4:6.35:0,6,31	0/0:16,0:16:44.35:0,44,453	0/0:23,0:22:48.14:0,48,633	0/0:17,0:16:39.04:0,39,483	0/0:33,0:30:80.54:0,81,1058	0/1:11,0:9:26.51:27,0,56	0/0:21,0:19:56.42:0,56,415	0/0:16,0:16:41.74:0,42,317	0/1:19,1:17:11.60:12,0,239	0/1:12,3:18:5.94:6,0,301	0/1:12,7:19:99:116,0,177	0/0:34,0:32:80.63:0,81,625	0/0:27,0:26:70.56:0,71,510	0/0:39,0:31:87.19:0,87,1150	0/0:28,0:25:71.59:0,72,555	0/0:19,0:18:27.67:0,28,533	0/0:15,0:12:28.64:0,29,376	0/0:21,0:20:35.64:0,36,448	0/1:16,1:17:99:129,0,189	0/1:11,0:11:27.16:71,0,27	0/1:25,6:27:53.34:53,0,208	0/0:30,0:28:75.62:0,76,521	0/0:31,0:30:84.25:0,84,1107	0/0:27,0:23:62.66:0,63,754	0/0:14,0:9:14.84:0,15,172
chr10	45257833	.	G	GT	1206.50	PASS	AB=0.837;AC=18;AF=0.321;AN=56;BaseQRankSum=6.342;DP=591;FS=125.764;HRun=1;HaplotypeScore=184.8499;InbreedingCoeff=-0.5012;MQ=57.81;MQ0=22;MQRankSum=-8.211;QD=3.34;ReadPosRankSum=2.177;VQSLOD=0.5617;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:8:5.99:0,6,76	0/1:7,3:10:20.65:21,0,94	0/0:43,0:22:58.36:0,58,664	0/0:59,0:26:59.71:0,60,683	0/1:16,11:27:75.34:75,0,171	0/1:18,1:19:78.67:79,0,231	0/0:10,2:12:3.46:0,3,160	0/0:11,0:11:24.08:0,24,262	0/1:20,2:20:37.68:38,0,85	0/1:11,5:15:99:173,0,117	0/1:17,2:19:91.85:92,0,143	0/0:27,3:30:4.90:0,5,303	0/1:15,3:18:29.11:29,0,210	0/1:15,1:16:33.73:34,0,49	0/1:28,0:24:27.25:27,0,226	0/1:32,1:30:38.14:38,0,179	0/1:8,2:9:19.66:20,0,29	0/0:15,0:15:41.70:0,42,462	0/0:23,2:20:17.38:0,17,402	0/1:14,7:21:99:154,0,150	0/0:14,0:13:11.17:0,11,185	0/1:15,7:22:57.25:57,0,77	0/1:8,8:16:7.99:149,0,8	0/0:11,2:13:4.34:0,4,107	0/1:14,7:21:80.31:80,0,167	0/1:27,4:29:99:148,0,442	0/1:15,2:17:35.77:36,0,192	0/1:10,5:15:99:113,0,221
chr10	45257837	.	G	GT	3109.36	PASS	AB=0.937;AC=25;AF=0.446;AN=56;BaseQRankSum=4.176;DP=571;FS=133.524;HRun=1;HaplotypeScore=172.7582;InbreedingCoeff=-0.7696;MQ=55.00;MQ0=22;MQRankSum=-7.430;QD=6.76;ReadPosRankSum=3.857;VQSLOD=0.5042;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:8,0:8:25.02:25,0,32	0/1:9,0:9:53.93:130,0,54	0/0:43,0:21:52.80:0,53,574	0/0:57,0:24:33.92:0,34,548	0/1:26,1:27:99:233,0,179	0/1:19,0:19:99:136,0,227	0/1:12,0:12:28.32:28,0,149	0/1:8,0:8:57.72:58,0,165	0/1:17,4:19:79.88:119,0,80	0/1:11,5:15:99:207,0,100	0/1:18,1:19:99:143,0,160	0/1:20,8:28:53.10:53,0,300	0/1:17,0:17:36.09:36,0,218	0/1:13,2:15:10.79:127,0,11	0/1:23,5:24:74.30:74,0,224	0/1:25,7:29:78.27:78,0,193	0/1:10,0:9:28.55:43,0,29	0/1:13,2:15:14.73:15,0,255	0/1:23,0:18:87.47:87,0,307	0/1:22,0:22:99:296,0,126	0/0:11,0:10:5.16:0,5,108	0/1:20,1:21:57.42:165,0,57	0/1:16,0:16:3.61:334,0,4	0/1:12,0:12:4.63:5,0,19	0/1:20,0:20:99:193,0,125	0/1:23,8:29:99:322,0,398	0/1:15,1:16:99:106,0,193	0/1:15,0:15:99:249,0,195
chr10	45257847	.	GC	G	3030.03	PASS	AB=0.788;AC=46;AF=0.821;AN=56;BaseQRankSum=-0.045;DP=485;FS=7.102;HRun=1;HaplotypeScore=156.6819;InbreedingCoeff=-0.0593;MQ=51.77;MQ0=21;MQRankSum=-2.308;QD=6.30;ReadPosRankSum=0.589;VQSLOD=0.2751;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,4:5:3.45:22,3,0	1/1:5,4:9:6.11:88,6,0	0/1:31,1:12:15.55:16,0,337	0/1:46,1:15:12.44:12,0,263	1/1:20,6:26:10.60:91,11,0	1/1:7,11:18:18.16:180,18,0	1/1:6,4:10:7.68:95,8,0	0/0:4,0:4:8.75:0,9,50	1/1:9,3:13:3.69:39,4,0	0/1:12,2:14:49.10:49,0,152	1/1:9,7:16:13.70:132,14,0	1/1:15,6:21:10.91:84,11,0	1/1:8,5:13:4.15:67,4,0	1/1:7,6:15:5.35:86,5,0	1/1:10,12:21:17.21:273,17,0	1/1:13,13:28:23.37:260,23,0	1/1:5,2:7:0.40:2,0,0	0/1:4,7:11:0.50:221,0,0	0/1:7,11:14:59.48:249,0,59	1/1:14,7:21:36.53:282,37,0	1/1:0,7:6:3:27,3,0	1/1:11,9:20:5.73:76,6,0	1/1:12,3:15:12.51:75,13,0	1/1:2,6:10:2.88:40,3,0	1/1:13,4:17:23.79:152,24,0	0/1:16,10:24:80.89:289,0,81	0/1:12,3:15:22:109,0,22	0/1:8,7:15:25.13:157,0,25
chr10	45259544	.	TCA	T	244.17	PASS	AB=0.906;AC=14;AF=0.350;AN=40;BaseQRankSum=0.909;DP=325;FS=8.743;HRun=0;HaplotypeScore=48.1786;InbreedingCoeff=0.3274;MQ=84.67;MQ0=11;MQRankSum=0.217;QD=1.94;ReadPosRankSum=0.852;VQSLOD=-0.1824;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:2.99:0,3,23	./.	1/1:40,0:26:0.89:2,1,0	./.	0/0:9,0:9:3.01:0,3,43	0/0:5,0:5:3.01:0,3,39	0/0:20,0:20:12.50:0,13,156	./.	0/0:4,0:4:3.01:0,3,44	1/1:12,1:13:3.01:32,3,0	1/1:7,1:9:5.85:46,6,0	0/0:8,0:8:6.02:0,6,88	0/0:7,0:7:6.02:0,6,88	./.	1/1:7,2:9:6.02:64,6,0	1/1:7,3:10:12.03:129,12,0	1/1:10,0:11:5.68:28,6,0	0/1:10,3:13:21.30:55,0,21	./.	./.	0/0:28,0:26:9:0,9,90	0/0:10,0:10:3.01:0,3,39	0/0:7,0:7:3.01:0,3,44	0/1:20,0:20:11.53:12,0,139	./.	0/0:11,0:11:0.89:0,1,2	0/0:5,0:5:0.47:0,0,1	./.
chr10	45259634	.	AAG	A	116.10	PASS	AB=1.000;AC=12;AF=0.316;AN=38;BaseQRankSum=1.790;DP=109;FS=32.017;HRun=0;HaplotypeScore=23.3451;InbreedingCoeff=0.2144;MQ=43.12;MQ0=13;MQRankSum=-3.701;QD=5.28;ReadPosRankSum=0.678;VQSLOD=1.0999;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,1:1:1.55:4,2,0	./.	0/0:22,0:2:5.84:0,6,40	0/0:27,0:3:3.85:0,4,23	0/0:4,0:3:3.01:0,3,40	./.	0/1:4,0:4:13.47:13,0,34	0/1:5,0:5:35.71:36,0,50	./.	0/0:1,0:1:3.01:0,3,52	0/0:1,0:1:3.01:0,3,43	./.	./.	0/0:3,0:3:1.03:0,1,32	./.	./.	0/0:6,0:6:18.06:0,18,341	./.	0/0:4,0:4:3.01:0,3,61	0/0:4,0:4:3.90:0,4,62	0/0:5,0:4:6.02:0,6,98	1/1:1,3:4:8.94:111,9,0	1/1:2,4:4:2.94:30,3,0	0/0:1,1:2:3.01:0,3,51	0/0:2,0:2:3.01:0,3,30	1/1:1,0:1:2.96:19,3,0	./.	1/1:1,0:1:2.96:19,3,0
chr10	45263227	.	T	TG	4174.05	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-11.144;DP=666;FS=3.226;HRun=8;HaplotypeScore=65.9078;InbreedingCoeff=0.9996;MQ=86.89;MQ0=0;MQRankSum=1.081;QD=26.76;ReadPosRankSum=2.996;VQSLOD=4.5312;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:66.02:0,66,604	0/0:11,0:11:29.99:0,30,269	0/0:35,0:36:36.63:0,37,437	0/0:18,0:18:32.96:0,33,288	0/0:34,0:34:90.02:0,90,824	0/0:22,0:22:51:0,51,462	0/0:15,0:15:36:0,36,325	0/0:24,0:24:60:0,60,544	0/0:17,0:17:45.02:0,45,412	1/1:5,20:25:54.16:622,54,0	1/1:4,20:24:51.15:583,51,0	0/0:32,0:32:78.03:0,78,714	0/0:18,0:18:51.03:0,51,467	0/0:22,0:22:60:0,60,539	1/1:3,29:32:84.25:967,84,0	1/1:3,24:27:75.22:863,75,0	0/0:27,0:27:78.04:0,78,714	1/1:6,11:17:30.09:346,30,0	0/0:21,0:21:51.02:0,51,465	0/0:17,0:17:42.01:0,42,384	0/0:23,0:23:63.03:0,63,576	0/0:27,0:27:81.03:0,81,735	0/0:19,0:19:54.03:0,54,494	0/0:19,0:19:45:0,45,406	1/1:5,26:31:69.20:793,69,0	0/0:26,1:27:34.41:0,34,569	0/0:35,0:35:93.04:0,93,851	0/0:17,0:17:51.03:0,51,467
chr10	45264871	.	TA	T	2026.48	PASS	AB=0.941;AC=19;AF=0.339;AN=56;BaseQRankSum=13.068;DP=493;FS=0.845;HRun=11;HaplotypeScore=67.2230;InbreedingCoeff=0.7533;MQ=57.44;MQ0=2;MQRankSum=-1.635;QD=12.43;ReadPosRankSum=4.212;VQSLOD=3.6299;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,7:17:9.66:235,10,0	0/0:1,0:7:13.50:0,14,64	0/1:17,1:10:7.34:7,0,100	0/1:15,0:8:22.24:22,0,52	0/0:33,1:34:58.37:0,58,804	0/1:12,2:14:7.20:7,0,333	0/0:8,0:8:24.05:0,24,249	0/0:40,0:39:99:0,102,1046	1/1:2,7:9:20.94:166,21,0	0/0:18,0:18:48.12:0,48,512	0/0:23,0:23:63.13:0,63,656	1/1:4,13:17:47.79:368,48,0	1/1:5,8:13:26.87:204,27,0	1/1:2,17:19:56.79:440,57,0	0/0:23,1:24:42.66:0,43,616	0/0:15,0:14:36.08:0,36,376	0/0:19,0:19:42.09:0,42,440	0/0:20,1:21:26.71:0,27,467	0/0:10,1:11:5.45:0,5,263	0/0:20,0:20:50.31:0,50,506	0/0:18,0:18:22.24:0,22,380	1/1:1,16:17:44.86:354,45,0	1/1:3,9:13:31.34:215,31,0	1/1:1,9:11:27.39:212,27,0	0/0:20,0:20:23.39:0,23,392	0/0:20,0:20:33.61:0,34,464	0/0:24,0:25:69:0,69,711	0/0:6,0:6:18.05:0,18,192
chr10	45264883	.	CAA	C	3756.77	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=11.601;DP=538;FS=6.500;HRun=11;HaplotypeScore=78.3335;InbreedingCoeff=0.9949;MQ=59.95;MQ0=3;MQRankSum=1.841;QD=29.12;ReadPosRankSum=2.136;VQSLOD=4.0891;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,8:16:39.08:447,39,0	0/0:7,0:7:15.94:0,16,254	0/0:26,0:12:16.72:0,17,206	0/0:18,1:9:22.46:0,22,258	0/0:34,0:34:81.75:0,82,1354	0/0:18,0:18:54.17:0,54,881	0/0:10,0:10:27.09:0,27,455	0/0:48,0:47:99:0,129,2102	1/1:5,5:10:27.08:326,27,0	0/0:23,0:23:69.21:0,69,1092	0/0:30,0:30:84.27:0,84,1365	1/1:9,13:22:60.12:698,60,0	1/1:2,13:15:30.08:343,30,0	1/1:4,17:21:54.15:630,54,0	0/0:26,0:26:66.17:0,66,1020	0/0:14,0:13:36.09:0,36,564	0/0:15,0:15:45.11:0,45,716	0/0:18,0:18:48.13:0,48,806	0/0:16,0:16:42.03:0,42,656	0/0:18,0:18:48.15:0,48,799	0/0:14,0:14:42.14:0,42,676	1/1:6,12:18:42.02:501,42,0	1/1:4,10:14:41.86:481,42,0	1/1:2,11:13:27.55:330,28,0	0/0:16,0:16:45:0,45,697	0/0:19,0:19:53.67:0,54,879	0/0:24,0:24:72.22:0,72,1213	0/0:13,0:13:39.08:0,39,541
chr10	45265634	.	TTGA	T	156.83	PASS	AC=2;AF=0.038;AN=52;BaseQRankSum=2.062;DP=734;FS=1.685;HRun=0;HaplotypeScore=118.6846;InbreedingCoeff=0.9840;MQ=54.87;MQ0=39;MQRankSum=-1.529;QD=11.20;ReadPosRankSum=-0.785;VQSLOD=3.1716;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:36:99:0,102,2156	1/1:3,11:12:15.05:245,15,0	./.	./.	0/0:29,0:28:75.24:0,75,1628	0/0:16,0:16:48.16:0,48,1054	0/0:31,0:26:60.16:0,60,1293	0/0:26,0:25:66.21:0,66,1413	0/0:28,0:26:78.27:0,78,1689	0/0:33,0:33:93.32:0,93,2066	0/0:21,0:20:57.18:0,57,1199	0/0:36,0:35:96.32:0,96,2083	0/0:24,0:23:63.20:0,63,1358	0/0:25,0:23:69.22:0,69,1479	0/0:35,0:33:90.27:0,90,1864	0/0:47,0:45:99:0,126,2714	0/0:28,0:25:69.24:0,69,1516	0/0:34,0:34:99:0,99,2145	0/0:19,0:14:42.14:0,42,900	0/0:29,0:29:78.26:0,78,1735	0/0:41,0:39:87.30:0,87,1898	0/0:22,0:21:54.19:0,54,1206	0/0:23,0:22:57.20:0,57,1273	0/0:24,0:20:57.20:0,57,1272	0/0:23,0:21:57.20:0,57,1273	0/0:29,0:27:78.27:0,78,1729	0/0:34,0:32:93.28:0,93,1963	0/0:22,0:22:63.22:0,63,1399
chr10	45267555	.	CT	C	2275.11	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=8.822;DP=565;FS=6.865;HRun=9;HaplotypeScore=58.9527;InbreedingCoeff=0.9622;MQ=75.30;MQ0=0;MQRankSum=-0.299;QD=19.96;ReadPosRankSum=1.133;VQSLOD=4.2495;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:48.14:0,48,552	0/0:15,0:16:44.90:0,45,475	0/0:15,1:16:5.58:0,6,289	0/0:9,1:10:9.03:0,9,101	0/0:32,1:33:59.77:0,60,928	0/0:20,0:20:39.08:0,39,429	0/0:17,0:17:42.12:0,42,485	0/0:42,0:42:93.28:0,93,1073	0/0:16,0:16:33.10:0,33,380	1/1:0,19:19:54.02:494,54,0	1/1:1,16:17:44.97:403,45,0	0/0:27,0:27:66.19:0,66,754	0/0:24,0:24:57.09:0,57,633	0/0:15,0:15:36.11:0,36,415	1/1:1,25:26:51.02:467,51,0	1/1:1,14:15:39.02:357,39,0	0/0:24,0:24:54.15:0,54,614	1/1:3,14:17:36.02:329,36,0	0/0:21,0:22:57:0,57,638	0/0:19,0:19:54.16:0,54,623	0/0:13,0:14:29.14:0,29,375	0/0:12,0:12:33.09:0,33,371	0/0:15,1:16:14.60:0,15,407	0/0:16,0:16:42.12:0,42,485	1/1:1,19:20:45.02:412,45,0	0/0:19,0:19:42.12:0,42,485	0/0:38,1:40:77.64:0,78,1100	0/0:16,0:16:45.11:0,45,498
chr10	45267941	.	TTTA	T	13575.50	PASS	AB=0.967;AC=29;AF=0.518;AN=56;BaseQRankSum=16.600;DP=638;FS=3.885;HRun=0;HaplotypeScore=100.4076;InbreedingCoeff=0.9278;MQ=84.80;MQ0=0;MQRankSum=-7.238;QD=40.28;ReadPosRankSum=1.461;VQSLOD=6.2611;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,32:32:87.21:1420,87,0	0/0:8,0:8:21.04:0,21,396	0/0:24,0:24:66.16:0,66,1467	0/0:21,0:21:54.05:0,54,1113	0/0:20,0:20:57.20:0,57,1298	0/0:24,0:24:66.23:0,66,1498	0/0:24,0:24:69.24:0,69,1546	0/0:47,0:47:99:0,135,3101	1/1:0,14:14:42.10:684,42,0	1/1:0,13:13:36.12:613,36,0	1/1:1,19:20:57.15:940,57,0	1/1:2,28:30:78.27:1328,78,0	1/1:0,16:16:45.15:753,45,0	1/1:0,11:11:30.10:511,30,0	1/1:2,42:44:99:1727,105,0	1/1:1,42:43:99:1777,108,0	0/0:25,0:25:75.26:0,75,1699	1/1:0,10:10:27.09:460,27,0	0/0:28,0:28:78.24:0,78,1716	0/0:22,0:22:66.23:0,66,1519	0/0:23,0:23:69.24:0,69,1591	1/1:2,16:18:51.02:773,51,0	1/1:1,20:21:57.20:971,57,0	1/1:1,14:15:33.11:562,33,0	1/1:0,21:21:63.17:1041,63,0	0/1:28,1:29:14.80:15,0,1781	0/0:30,0:30:87.30:0,87,2006	0/0:5,0:5:15.05:0,15,346
chr10	45269015	.	AT	A	4284.52	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-10.245;DP=460;FS=4.760;HRun=10;HaplotypeScore=60.6310;InbreedingCoeff=0.9192;MQ=71.68;MQ0=0;MQRankSum=-0.158;QD=20.60;ReadPosRankSum=3.115;VQSLOD=5.9816;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,16:23:45.94:376,46,0	0/0:8,0:8:18.03:0,18,190	0/0:13,0:12:0.88:0,1,214	0/0:13,0:9:11.89:0,12,115	0/0:3,0:17:45.81:0,46,268	0/0:9,0:28:54.29:0,54,299	0/0:3,0:11:1:0,1,65	0/0:9,0:23:40:0,40,250	1/1:0,10:10:24:208,24,0	1/1:1,12:13:35.99:313,36,0	1/1:2,15:17:44.98:391,45,0	1/1:2,15:17:41.99:365,42,0	1/1:3,10:13:26.99:234,27,0	1/1:1,14:15:38.99:339,39,0	1/1:3,16:19:47.99:417,48,0	1/1:2,19:20:50.98:443,51,0	0/0:21,1:22:28.09:0,28,536	1/1:6,18:24:38.65:471,39,0	0/0:4,0:16:26.19:0,26,213	0/0:1,0:22:59.79:0,60,323	0/0:2,0:6:11.48:0,11,62	1/1:1,9:10:23.99:208,24,0	1/1:1,10:11:29.99:260,30,0	1/1:0,6:6:18:156,18,0	1/1:3,6:9:11.99:104,12,0	0/0:2,1:22:29.65:0,30,240	0/0:7,0:31:68.66:0,69,382	0/0:1,0:20:24.78:0,25,117
chr10	45269155	.	TTCC	T	4042.30	PASS	AB=0.882;AC=13;AF=0.232;AN=56;BaseQRankSum=5.563;DP=356;FS=0.982;HRun=0;HaplotypeScore=62.8220;InbreedingCoeff=0.8607;MQ=66.86;MQ0=0;MQRankSum=-1.701;QD=41.25;ReadPosRankSum=2.357;VQSLOD=4.7241;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:36.12:0,36,796	0/0:6,0:6:18.06:0,18,415	0/0:5,0:5:13.60:0,14,249	0/0:6,0:5:15.04:0,15,256	0/0:27,0:27:81.28:0,81,1848	0/0:13,0:13:36.12:0,36,820	0/0:5,0:5:15.05:0,15,343	0/0:25,0:25:75.26:0,75,1692	0/0:8,0:8:15.05:0,15,337	1/1:0,13:13:39.13:665,39,0	1/1:0,6:6:18.06:307,18,0	0/0:19,0:19:57.20:0,57,1312	0/0:8,0:8:21.07:0,21,484	0/0:7,0:7:18.06:0,18,415	1/1:0,15:15:45.15:766,45,0	1/1:0,14:13:36.12:614,36,0	0/0:14,0:14:42.09:0,42,872	1/1:1,23:24:66.23:1124,66,0	0/0:13,0:13:36.12:0,36,829	0/0:12,0:12:36.12:0,36,830	0/0:8,0:8:21.07:0,21,482	0/0:3,0:3:9.03:0,9,208	0/0:18,0:18:54.19:0,54,1225	0/0:3,0:3:9.03:0,9,208	1/1:0,11:11:30.10:509,30,0	0/1:13,2:15:57.21:57,0,855	0/0:23,0:23:66.19:0,66,1407	0/0:18,0:18:51.18:0,51,1169
chr10	45269172	.	TA	T	3046.09	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=6.284;DP=402;FS=2.115;HRun=1;HaplotypeScore=60.4566;InbreedingCoeff=0.9802;MQ=67.77;MQ0=0;MQRankSum=1.208;QD=32.75;ReadPosRankSum=1.194;VQSLOD=3.3868;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,14:15:35.97:501,36,0	0/0:6,0:6:18.06:0,18,267	0/0:6,0:6:18.06:0,18,269	0/0:6,0:6:14.45:0,14,159	0/0:30,0:30:90.27:0,90,1301	0/0:18,0:18:54.18:0,54,807	0/0:5,0:5:15.05:0,15,224	0/0:30,0:30:90.30:0,90,1347	1/1:0,10:10:18.06:251,18,0	0/0:17,0:17:51.17:0,51,758	0/0:10,0:10:30.10:0,30,448	1/1:0,20:20:60.20:838,60,0	1/1:0,7:7:15.05:210,15,0	1/1:0,13:13:33.11:454,33,0	0/0:20,0:20:60.11:0,60,834	0/0:16,0:16:42.13:0,42,607	0/0:12,0:12:36.12:0,36,538	0/0:31,0:31:90.02:0,90,1238	0/0:12,0:12:36.08:0,36,477	0/0:13,0:13:39.13:0,39,569	0/0:7,0:7:21.07:0,21,313	1/1:0,7:7:18.02:229,18,0	1/1:0,17:17:45.10:600,45,0	1/1:0,4:4:12.04:168,12,0	0/0:13,0:13:36.12:0,36,537	0/0:16,0:16:48.16:0,48,704	0/0:25,0:25:75.25:0,75,1098	0/0:16,0:16:42.14:0,42,627
chr10	45269289	.	TA	T	2006.45	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=9.903;DP=432;FS=1.548;HRun=8;HaplotypeScore=42.3208;InbreedingCoeff=0.9086;MQ=65.68;MQ0=1;MQRankSum=-2.295;QD=22.05;ReadPosRankSum=2.258;VQSLOD=3.6137;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:42.12:0,42,496	0/0:5,0:5:12.04:0,12,145	0/0:10,0:7:1.32:0,1,134	0/0:2,0:3:6.01:0,6,57	0/0:23,0:24:63.03:0,63,716	0/0:21,0:21:57.17:0,57,679	0/0:4,0:4:9.03:0,9,109	0/0:48,0:48:99:0,104,1468	0/0:15,0:15:36.11:0,36,434	1/1:1,8:9:24.04:232,24,0	1/1:4,10:14:30.04:290,30,0	0/0:16,0:16:39.12:0,39,467	0/0:20,0:20:60.18:0,60,724	0/0:13,0:13:36.11:0,36,435	1/1:1,19:20:54.09:521,54,0	1/1:1,15:16:42.07:406,42,0	0/0:22,0:22:63.16:0,63,737	1/1:2,18:20:51.03:483,51,0	0/0:15,0:15:33.09:0,33,388	0/0:23,0:23:66.20:0,66,797	0/0:5,0:5:12.04:0,12,145	0/0:5,0:5:15.05:0,15,181	0/0:14,0:14:42.13:0,42,507	0/0:16,0:16:45.14:0,45,543	1/1:3,9:12:27.04:261,27,0	0/0:18,1:19:19.17:0,19,515	0/0:17,0:17:39.12:0,39,470	0/0:9,0:9:27.08:0,27,326
chr10	45269672	.	C	CCCAG	7840.09	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-2.908;DP=603;FS=3.533;HRun=0;HaplotypeScore=96.0698;InbreedingCoeff=0.9944;MQ=79.00;MQ0=1;MQRankSum=-3.238;QD=62.72;ReadPosRankSum=0.597;VQSLOD=6.7288;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:81.22:0,81,1436	0/0:5,0:5:15.04:0,15,249	0/0:16,0:16:45.15:0,45,811	0/0:15,0:15:42.14:0,42,745	0/0:18,0:18:51.17:0,51,951	0/0:18,0:18:48.15:0,48,864	0/0:40,0:40:99:0,102,1858	0/0:27,0:27:72.23:0,72,1283	0/0:11,0:11:33.11:0,33,616	1/1:1,11:14:41.35:985,41,0	1/1:1,7:9:18.06:467,18,0	0/0:42,0:42:99:0,114,2091	0/0:24,0:24:69.23:0,69,1256	0/0:20,0:20:60.18:0,60,1049	1/1:3,16:19:45.11:1138,45,0	1/1:5,25:31:81.28:2076,81,0	0/0:24,0:24:66.16:0,66,1165	1/1:3,33:36:90.27:2296,90,0	0/0:14,0:14:42.13:0,42,744	0/0:9,0:9:24.08:0,24,448	0/0:59,0:58:99:0,163,3014	0/0:9,0:9:27.09:0,27,501	0/0:17,0:17:39.11:0,39,666	0/0:25,0:25:69.24:0,69,1288	1/1:2,14:16:33.11:878,33,0	0/0:17,0:17:42.14:0,42,779	0/0:24,0:24:63.18:0,63,1078	0/0:14,0:14:39.13:0,39,728
chr10	45270170	.	GGTCGTC	G	6181.04	PASS	AB=0.515;AC=11;AF=0.196;AN=56;BaseQRankSum=5.566;DP=583;FS=2.028;HRun=0;HaplotypeScore=141.8319;InbreedingCoeff=0.8847;MQ=84.08;MQ0=0;MQRankSum=-13.714;QD=64.39;ReadPosRankSum=0.363;VQSLOD=4.9836;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,111,4124	0/0:6,0:6:18.06:0,18,674	0/0:25,0:25:75.25:0,75,2556	0/0:16,0:16:42.14:0,42,1261	0/0:19,0:19:57.20:0,57,2145	0/0:30,0:30:90.31:0,90,3387	0/0:29,0:29:87.29:0,87,3140	0/0:26,0:26:78.27:0,78,2844	0/0:15,0:15:42.14:0,42,1524	1/1:0,16:16:48.15:1176,48,0	1/1:0,10:10:27.09:684,27,0	0/0:23,0:23:66.23:0,66,2379	0/0:20,0:20:57.18:0,57,1994	0/0:24,0:24:72.25:0,72,2559	1/1:0,19:19:54.19:1377,54,0	0/1:1,16:17:67.77:1029,0,68	0/0:36,0:36:99:0,108,3909	1/1:0,16:16:36.12:922,36,0	0/0:19,0:19:57.18:0,57,1921	0/0:15,0:15:45.15:0,45,1656	0/0:42,0:42:99:0,126,4586	0/0:21,0:21:57.20:0,57,2131	0/0:11,0:11:27.09:0,27,1013	0/0:23,0:23:69.24:0,69,2451	1/1:0,18:18:39.13:993,39,0	0/0:20,0:20:60.21:0,60,2130	0/0:13,0:13:39.13:0,39,1375	0/0:16,0:16:45.15:0,45,1692
chr10	45270193	.	TC	T	5958.72	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=6.656;DP=578;FS=3.553;HRun=2;HaplotypeScore=84.6066;InbreedingCoeff=0.9826;MQ=89.89;MQ0=0;MQRankSum=0.847;QD=35.47;ReadPosRankSum=4.216;VQSLOD=5.3673;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,32:34:93.30:1208,93,0	0/0:4,0:4:9.03:0,9,135	0/0:24,0:24:65.82:0,66,893	0/0:23,0:23:66.20:0,66,918	0/0:21,0:21:63.21:0,63,944	0/0:30,0:30:90.29:0,90,1328	0/0:25,0:25:72.24:0,72,1074	0/0:25,0:25:75.25:0,75,1107	1/1:0,16:16:42.14:545,42,0	0/0:17,0:17:48.14:0,48,697	0/0:10,0:10:12.04:0,12,179	1/1:0,24:24:66.21:857,66,0	1/1:0,18:18:48.16:623,48,0	1/1:0,20:20:57.19:739,57,0	0/0:18,0:18:48.16:0,48,718	0/0:18,1:19:15.18:0,15,699	0/0:36,0:36:99:0,108,1594	0/0:19,0:19:51.17:0,51,763	0/0:14,0:14:42.14:0,42,624	0/0:15,0:15:45.15:0,45,666	0/0:41,0:41:99:0,120,1793	1/1:0,22:22:63.20:818,63,0	1/1:0,13:13:30.09:389,30,0	1/1:0,21:21:60.20:779,60,0	0/0:21,0:21:48.15:0,48,683	0/0:21,0:21:57.19:0,57,849	0/0:13,0:13:39.12:0,39,565	0/0:14,0:14:42.13:0,42,609
chr10	45275848	.	C	CGCCCCCTGGTT	19956.79	PASS	AB=0.969;AC=13;AF=0.232;AN=56;BaseQRankSum=-2.270;DP=791;FS=0.000;HRun=0;HaplotypeScore=237.3315;InbreedingCoeff=0.8982;MQ=82.52;MQ0=0;MQRankSum=-17.126;QD=97.83;ReadPosRankSum=-1.335;VQSLOD=4.3767;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,102,3215	0/0:17,0:17:51.18:0,51,1714	0/0:32,0:32:75.15:0,75,2136	0/0:19,0:19:45.12:0,45,1218	0/0:18,0:18:48.16:0,48,1622	0/0:28,0:28:81.28:0,81,2708	0/0:31,0:31:81.24:0,81,2500	0/0:29,0:29:72.25:0,72,2389	0/0:21,0:21:60.21:0,60,1936	1/1:10,13:31:90.28:4051,90,0	1/1:7,6:14:30.06:1307,30,0	0/0:41,0:41:99:0,120,4098	0/0:29,0:29:81.28:0,81,2715	0/0:27,0:27:78.27:0,78,2733	1/1:15,21:42:99:4825,99,0	1/1:15,23:42:99:5484,111,0	0/0:36,0:36:87.30:0,87,2735	1/1:13,4:21:45.11:2208,45,0	0/0:28,0:28:78.27:0,78,2507	0/0:24,0:24:66.23:0,66,2175	0/0:66,0:66:99:0,181,5811	0/0:14,0:14:36.12:0,36,1255	0/0:12,0:12:33.10:0,33,1022	0/0:35,0:35:99:0,102,3164	1/1:13,9:23:54.14:1989,54,0	0/1:30,1:31:93.25:93,0,2346	0/0:30,0:29:84.29:0,84,2870	0/0:8,0:8:18.06:0,18,589
chr10	45276252	.	G	GACCT	40180.11	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-9.388;DP=671;FS=0.459;HRun=0;HaplotypeScore=96.9093;InbreedingCoeff=0.9668;MQ=82.95;MQ0=0;MQRankSum=-8.778;QD=68.57;ReadPosRankSum=4.349;VQSLOD=6.7564;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,42:46:99:2746,102,0	1/1:0,3:3:9.03:247,9,0	0/0:28,0:26:78.24:0,78,1431	0/0:23,0:22:43.03:0,43,831	1/1:3,13:19:42.14:1148,42,0	1/1:2,21:23:57.20:1534,57,0	1/1:6,28:37:96.33:2545,96,0	1/1:14,24:39:99:2946,114,0	1/1:4,27:32:84.29:2227,84,0	1/1:1,17:18:54.19:1473,54,0	1/1:1,7:9:21.07:573,21,0	1/1:5,29:35:99:2711,102,0	1/1:5,15:22:60.21:1631,60,0	1/1:5,21:26:75.26:1956,75,0	1/1:3,27:30:78.27:2136,78,0	1/1:4,30:36:96.33:2574,96,0	0/0:34,0:34:90.28:0,90,1677	1/1:4,16:21:51.18:1396,51,0	1/1:9,12:23:66.17:1500,66,0	1/1:3,9:13:27.09:739,27,0	1/1:3,17:21:57.20:1556,57,0	1/1:3,15:19:48.16:1312,48,0	1/1:1,9:12:27.09:722,27,0	1/1:7,28:36:66.18:1746,66,0	1/1:1,4:5:12.04:328,12,0	1/1:5,19:25:72.25:1932,72,0	1/1:5,17:23:66.22:1683,66,0	1/1:0,13:13:30.10:822,30,0
chr10	45276254	.	C	CCT	11677.22	PASS	AB=1.000;AC=47;AF=0.839;AN=56;BaseQRankSum=11.011;DP=633;FS=0.827;HRun=0;HaplotypeScore=164.7161;InbreedingCoeff=0.5686;MQ=85.90;MQ0=0;MQRankSum=-7.904;QD=21.39;ReadPosRankSum=8.792;VQSLOD=4.8207;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:41,0:41:82.19:838,82,0	1/1:3,0:3:9:78,9,0	0/0:29,0:27:78.26:0,78,1233	0/0:26,0:25:47.36:0,47,801	1/1:15,1:16:42.01:378,42,0	0/1:26,0:26:9.61:415,0,10	1/1:34,0:34:71.48:716,71,0	1/1:31,0:31:53.87:703,54,0	1/1:28,0:28:63.22:658,63,0	1/1:18,1:19:54.01:506,54,0	1/1:7,1:8:21:187,21,0	1/1:33,1:34:81.62:814,82,0	1/1:20,1:21:24.56:485,25,0	1/1:24,1:25:41.18:559,41,0	1/1:30,1:31:78:696,78,0	1/1:35,0:35:35.93:731,36,0	0/0:32,0:32:96.30:0,96,1519	1/1:19,1:20:12.59:381,13,0	0/1:21,0:21:33.53:347,0,34	1/1:10,0:10:26.99:234,27,0	1/1:23,0:23:36.09:473,36,0	1/1:16,1:17:48.01:431,48,0	1/1:11,0:11:26.19:219,26,0	1/1:33,1:34:3.42:498,3,0	0/1:5,0:5:9.88:89,0,10	1/1:21,0:21:11.79:469,12,0	1/1:21,1:22:45.96:513,46,0	1/1:10,0:10:29.99:260,30,0
chr10	45276505	.	TCTCTCG	T	3041.23	PASS	AB=1.000;AC=19;AF=0.365;AN=52;BaseQRankSum=8.397;DP=458;FS=2.649;HRun=0;HaplotypeScore=111.2931;InbreedingCoeff=0.6978;MQ=88.56;MQ0=1;MQRankSum=-9.248;QD=17.09;ReadPosRankSum=3.899;VQSLOD=2.7195;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:10,19:29:17.99:384,18,0	0/0:3,0:6:5.29:0,5,53	0/1:29,0:25:11.86:12,0,640	0/0:47,0:37:15.03:0,15,686	0/0:11,0:11:29.82:0,30,780	0/0:22,0:22:48.11:0,48,1349	0/0:15,0:15:45.12:0,45,1188	0/0:24,0:24:42.13:0,42,1190	1/1:7,8:15:18.06:383,18,0	0/1:8,0:8:5.26:5,0,59	./.	1/1:7,19:26:45.15:928,45,0	1/1:6,8:14:24.04:470,24,0	1/1:3,12:15:18.06:386,18,0	./.	0/0:7,0:7:2.92:0,3,40	0/0:13,0:13:21.07:0,21,624	0/0:3,0:3:3.01:0,3,78	0/0:18,0:18:21.06:0,21,510	0/0:10,0:10:21.07:0,21,677	0/0:45,0:45:99:0,105,2789	1/1:2,16:18:18.06:351,18,0	1/1:0,6:6:2.96:51,3,0	1/1:3,11:14:12.04:257,12,0	0/1:4,0:4:0.42:0,0,10	0/0:13,0:13:27.05:0,27,703	0/0:20,0:20:39.02:0,39,1108	0/0:19,0:19:39.13:0,39,1252
chr10	45276531	.	T	TCC	287.09	PASS	AB=0.875;AC=8;AF=0.154;AN=52;BaseQRankSum=5.497;DP=398;FS=4.990;HRun=3;HaplotypeScore=90.6255;InbreedingCoeff=0.7041;MQ=70.47;MQ0=2;MQRankSum=-3.928;QD=13.05;ReadPosRankSum=-2.009;VQSLOD=-0.0798;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:39.04:0,39,520	0/0:7,0:7:14.71:0,15,155	0/0:23,1:17:34.12:0,34,584	0/0:36,0:24:22.14:0,22,444	0/0:14,0:14:36.11:0,36,528	0/0:16,0:16:48.16:0,48,734	0/0:13,0:13:36.11:0,36,549	0/0:25,0:25:70:0,70,951	0/0:11,0:11:26.98:0,27,311	1/1:3,1:5:12.04:190,12,0	./.	0/0:26,0:26:17.12:0,17,659	0/0:11,0:11:24.05:0,24,298	0/0:17,0:17:19.06:0,19,318	./.	1/1:3,3:5:12:192,12,0	0/0:10,0:10:24.06:0,24,344	0/1:2,1:3:13.96:14,0,19	0/0:9,0:9:23.65:0,24,293	0/0:13,0:13:39.06:0,39,549	0/0:35,0:35:99:0,102,1425	0/0:22,0:22:10.23:0,10,313	1/1:6,0:6:2.96:19,3,0	0/0:14,0:14:14.23:0,14,130	0/1:1,0:2:0:0,0,0	0/0:12,0:12:36.12:0,36,534	0/0:17,0:17:51.16:0,51,741	0/0:14,0:14:42.11:0,42,600
chr10	45277568	.	GT	G	7198.83	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=17.518;DP=835;FS=12.468;HRun=1;HaplotypeScore=96.0672;InbreedingCoeff=0.9999;MQ=88.36;MQ0=0;MQRankSum=-7.748;QD=39.34;ReadPosRankSum=2.382;VQSLOD=4.2443;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,132,2081	0/0:11,0:11:33.07:0,33,465	0/0:26,0:26:78.23:0,78,1177	0/0:35,0:35:96.29:0,96,1487	0/0:24,0:24:69.24:0,69,1091	0/0:24,0:24:66.22:0,66,1047	0/0:26,0:26:78.27:0,78,1247	0/0:39,0:39:99:0,114,1801	0/0:32,0:32:96.31:0,96,1510	1/1:0,31:31:90.29:1242,90,0	1/1:0,26:26:75.25:1049,75,0	0/0:38,0:38:99:0,108,1704	0/0:29,0:29:84.28:0,84,1327	0/0:33,0:33:99:0,99,1555	1/1:0,44:44:99:1762,126,0	1/1:0,48:48:99:1846,132,0	0/0:30,0:30:90.31:0,90,1419	1/1:0,16:16:48.16:671,48,0	0/0:16,0:16:45.15:0,45,702	0/0:33,0:33:93.32:0,93,1481	0/0:36,0:36:99:0,99,1551	0/0:28,0:28:84.27:0,84,1318	0/0:30,0:30:90.31:0,90,1413	0/0:44,0:44:99:0,132,2057	1/1:0,18:18:45.15:629,45,0	0/0:31,0:31:93.31:0,93,1464	0/0:25,0:25:75.26:0,75,1191	0/0:17,0:17:51.17:0,51,815
chr10	45277811	.	TG	T	8630.27	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=6.861;DP=832;FS=7.215;HRun=4;HaplotypeScore=95.9023;InbreedingCoeff=0.9998;MQ=86.95;MQ0=0;MQRankSum=-6.481;QD=33.19;ReadPosRankSum=4.491;VQSLOD=4.9310;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,44:46:99:1482,100,0	0/0:9,0:9:27.06:0,27,358	0/0:23,0:22:60.15:0,60,794	0/0:36,0:36:93.80:0,94,1261	0/0:31,0:31:87.29:0,87,1212	0/0:17,0:17:51.17:0,51,713	0/0:30,0:30:87.24:0,87,1165	0/0:31,0:31:87.29:0,87,1219	1/1:2,30:32:87.27:1042,87,0	0/0:40,0:40:99:0,114,1568	0/0:13,0:13:39.12:0,39,528	1/1:0,35:35:99:1224,102,0	1/1:1,28:29:81.25:972,81,0	1/1:0,41:41:99:1439,120,0	0/0:51,0:51:99:0,141,1925	0/0:36,0:36:99:0,105,1452	0/0:36,0:36:99:0,108,1512	0/0:13,0:13:39.10:0,39,526	0/0:22,0:22:63.14:0,63,827	0/0:32,0:32:96.28:0,96,1289	0/0:44,0:44:99:0,132,1831	1/1:1,22:23:66.08:743,66,0	1/1:0,27:27:78.24:936,78,0	1/1:0,27:27:66.20:792,66,0	0/0:22,0:22:66.22:0,66,921	0/0:35,0:35:93.29:0,93,1283	0/0:31,0:31:81.25:0,81,1114	0/0:20,0:20:60.16:0,60,802
chr10	45278809	.	TGGTTC	T	975.17	PASS	AB=0.968;AC=21;AF=0.375;AN=56;BaseQRankSum=-1.901;DP=340;FS=3.158;HRun=0;HaplotypeScore=62.7823;InbreedingCoeff=0.0985;MQ=41.31;MQ0=23;MQRankSum=-2.986;QD=5.98;ReadPosRankSum=-4.314;VQSLOD=0.3114;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:22:43.81:0,44,594	0/0:7,0:7:21.04:0,21,297	0/0:18,0:5:7.22:0,7,66	0/0:23,0:5:7.75:0,8,46	0/1:11,0:10:5.28:5,0,213	0/0:17,0:17:39.45:0,39,570	0/1:9,0:8:3.35:3,0,202	0/0:13,1:11:30.01:0,30,369	0/0:14,0:12:9.24:0,9,225	1/1:9,3:10:4.26:415,4,0	1/1:1,2:3:6.01:82,6,0	0/1:14,0:13:0.33:0,0,117	0/1:15,0:14:48.01:48,0,202	0/1:13,0:13:8.62:9,0,214	1/1:7,0:5:5.99:77,6,0	1/1:5,1:4:0.86:84,1,0	0/0:20,0:18:33.64:0,34,453	0/1:6,1:6:13.81:197,0,14	0/1:13,0:13:20.61:21,0,300	0/0:5,0:4:8.21:0,8,82	0/0:7,0:6:10.27:0,10,151	0/0:14,0:12:28.95:0,29,389	0/1:8,0:7:9.54:10,0,110	0/1:10,0:9:10.30:10,0,65	1/1:3,0:3:8.95:98,9,0	0/1:16,0:16:5.73:6,0,497	0/1:13,0:12:71.22:71,0,264	0/0:11,0:10:30.05:0,30,428
chr10	45278812	.	TTC	T	447.32	PASS	AB=0.965;AC=20;AF=0.357;AN=56;BaseQRankSum=2.379;DP=337;FS=9.856;HRun=0;HaplotypeScore=53.4763;InbreedingCoeff=-0.5034;MQ=42.33;MQ0=24;MQRankSum=1.573;QD=1.85;ReadPosRankSum=0.954;VQSLOD=0.1868;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:21:25.78:26,0,102	0/0:7,0:7:16.69:0,17,126	0/1:15,0:3:0.93:1,0,12	0/0:24,0:6:6.91:0,7,26	0/1:11,0:9:4.13:4,0,58	0/1:17,0:17:7.58:8,0,169	0/0:7,0:6:8.37:0,8,69	0/0:17,0:14:12.29:0,12,184	0/1:10,2:10:27.34:27,0,33	0/1:13,0:11:20.45:116,0,20	0/1:5,0:5:10.49:10,0,12	0/1:8,4:11:11.31:70,0,11	0/1:13,1:13:19.89:63,0,20	0/1:12,1:13:36.92:37,0,43	0/1:8,0:7:11.23:13,0,11	0/1:8,0:6:11.47:11,0,18	0/1:18,1:17:50.82:51,0,88	0/1:10,0:9:22.93:23,0,52	0/1:12,2:13:57.19:57,0,183	0/0:5,0:4:5.03:0,5,54	0/1:7,0:6:8.02:8,0,57	0/1:14,0:12:5.69:6,0,92	0/0:7,0:6:0.30:0,0,25	0/1:10,0:8:11.98:35,0,12	0/1:4,0:4:9.79:20,0,10	0/0:16,0:16:1.88:0,2,279	0/1:12,0:10:5.84:6,0,109	0/0:11,0:10:29.90:0,30,304
chr10	45278846	.	GTATCT	G	3082.54	PASS	AB=0.933;AC=13;AF=0.232;AN=56;BaseQRankSum=7.181;DP=322;FS=17.043;HRun=0;HaplotypeScore=65.6231;InbreedingCoeff=0.8622;MQ=92.01;MQ0=1;MQRankSum=-9.490;QD=41.10;ReadPosRankSum=1.841;VQSLOD=2.2471;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:30.06:0,30,852	0/0:4,0:4:12.04:0,12,381	0/0:22,0:19:37.82:0,38,1565	0/0:15,0:12:30:0,30,868	0/0:6,0:6:18.06:0,18,549	0/0:10,0:10:24.08:0,24,740	0/0:14,0:14:39.13:0,39,1176	0/0:13,0:13:39.13:0,39,1183	0/0:10,0:9:27.09:0,27,844	1/1:0,9:9:27.09:585,27,0	1/1:0,5:5:12.04:260,12,0	0/0:9,0:9:24.08:0,24,737	0/0:9,0:8:24.08:0,24,736	0/0:15,0:15:42.14:0,42,1309	1/1:0,11:11:27.09:585,27,0	1/1:0,15:15:42.14:897,42,0	0/0:16,0:16:42.07:0,42,1151	1/1:0,13:13:24.08:521,24,0	0/0:13,0:13:33.10:0,33,976	0/0:9,0:9:27.09:0,27,835	0/0:21,0:21:63.17:0,63,1918	0/0:10,0:10:30.10:0,30,950	0/0:7,0:7:15.05:0,15,472	0/0:14,0:14:39.13:0,39,1212	1/1:0,7:8:21.03:399,21,0	0/1:13,1:14:22.97:23,0,1195	0/0:16,0:16:45.15:0,45,1396	0/0:2,0:2:6.02:0,6,181
chr10	45279463	.	A	AT	3630.72	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-10.435;DP=593;FS=0.384;HRun=10;HaplotypeScore=56.4416;InbreedingCoeff=0.9501;MQ=72.88;MQ0=0;MQRankSum=-1.017;QD=21.11;ReadPosRankSum=2.298;VQSLOD=4.5280;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,26:29:60.15:640,60,0	0/0:2,0:2:5.99:0,6,49	0/0:9,0:9:14.94:0,15,123	0/0:15,0:15:26.92:0,27,215	0/0:24,1:25:30.94:0,31,461	0/0:23,0:23:62.88:0,63,510	0/0:15,0:15:41.95:0,42,345	0/0:31,0:32:73.89:0,74,588	1/1:4,15:19:39.10:416,39,0	0/0:22,0:22:53.91:0,54,442	0/0:16,0:16:47.87:0,48,387	1/1:5,24:31:62.98:649,63,0	1/1:3,13:16:33.08:352,33,0	1/1:6,19:25:48.12:512,48,0	0/0:34,0:35:88.09:0,88,694	0/0:26,0:26:68.91:0,69,565	0/0:18,0:18:47.89:0,48,385	0/0:16,0:16:38.89:0,39,315	0/0:22,0:24:58.72:0,59,452	0/0:14,0:14:40.98:0,41,322	0/0:28,0:28:59.79:0,60,519	1/1:6,14:20:20.47:423,20,0	1/1:2,13:15:33.08:352,33,0	1/1:3,14:17:27.07:288,27,0	0/0:19,0:20:49.95:0,50,400	0/0:23,3:28:2.99:0,3,414	0/0:27,0:26:74.86:0,75,609	0/0:26,0:26:68.85:0,69,558
chr10	45280385	.	T	TG	6030.68	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-13.541;DP=746;FS=1.450;HRun=6;HaplotypeScore=69.4920;InbreedingCoeff=0.9984;MQ=90.46;MQ0=0;MQRankSum=-7.296;QD=32.25;ReadPosRankSum=3.340;VQSLOD=5.1582;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,33:35:93.30:1170,93,0	0/0:8,0:8:18.04:0,18,184	0/0:32,0:32:78.13:0,78,786	0/0:29,0:29:74.97:0,75,707	0/0:33,0:33:90.19:0,90,912	0/0:35,0:35:96.18:0,96,960	0/0:22,0:22:60.12:0,60,605	0/0:28,0:28:78.14:0,78,772	1/1:1,24:25:69.22:865,69,0	0/0:23,0:23:63.13:0,63,637	0/0:20,0:20:51.10:0,51,516	1/1:2,27:29:72.23:903,72,0	1/1:2,20:22:54.17:679,54,0	1/1:0,11:11:33.11:415,33,0	0/0:39,0:39:99:0,102,1040	0/0:46,0:46:99:0,129,1303	0/0:29,0:29:84.19:0,84,857	0/0:26,0:26:69.13:0,69,695	0/0:20,0:20:45.10:0,45,459	0/0:25,0:25:75.14:0,75,752	0/0:38,0:38:99:0,108,1071	1/1:2,11:13:27.09:340,27,0	1/1:2,27:29:78.25:980,78,0	1/1:4,19:23:54.17:679,54,0	0/0:26,0:26:78.14:0,78,777	0/0:21,0:21:57.13:0,57,581	0/0:37,0:37:99:0,102,1040	0/0:22,0:22:63.14:0,63,642
chr10	45283582	.	G	GA	7759.62	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-15.511;DP=822;FS=2.164;HRun=2;HaplotypeScore=79.8568;InbreedingCoeff=0.9999;MQ=80.73;MQ0=0;MQRankSum=0.032;QD=39.39;ReadPosRankSum=1.877;VQSLOD=5.4397;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,117,1450	0/0:12,0:12:33.10:0,33,408	0/0:21,0:21:54.11:0,54,621	0/0:19,0:19:36.41:0,36,456	0/0:39,0:39:99:0,117,1433	0/0:19,0:19:57.15:0,57,681	0/0:26,0:26:72.21:0,72,880	0/0:37,0:37:99:0,102,1236	0/0:27,0:27:75.24:0,75,929	1/1:1,35:36:99:1437,105,0	1/1:1,22:23:63.17:884,63,0	0/0:27,0:27:78.23:0,78,953	0/0:37,0:37:99:0,105,1275	0/0:37,0:37:99:0,111,1375	1/1:4,46:50:99:1901,132,0	1/1:0,36:36:99:1468,102,0	0/0:25,0:25:72.21:0,72,879	1/1:1,24:25:63.21:903,63,0	0/0:21,0:21:60.19:0,60,743	0/0:23,0:23:57.18:0,57,706	0/0:30,0:30:90.27:0,90,1102	0/0:36,0:36:99:0,108,1324	0/0:20,0:20:57.16:0,57,693	0/0:36,0:36:99:0,105,1271	1/1:0,27:27:81.27:1166,81,0	0/0:34,0:34:99:0,102,1218	0/0:30,0:30:87.27:0,87,1078	0/0:25,0:25:69.22:0,69,855
chr10	45286101	.	A	AAG	31733.38	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-9.599;DP=764;FS=0.488;HRun=0;HaplotypeScore=87.6287;InbreedingCoeff=0.9996;MQ=85.13;MQ0=2;MQRankSum=-8.526;QD=45.86;ReadPosRankSum=5.535;VQSLOD=6.4309;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,34:37:87.30:1620,87,0	1/1:0,13:13:36.12:652,36,0	0/0:25,0:25:72.18:0,72,998	0/0:21,0:21:48.11:0,48,670	1/1:1,24:25:69.17:1251,69,0	1/1:2,32:34:81.28:1517,81,0	1/1:1,26:28:66.23:1236,66,0	1/1:2,29:31:87.29:1600,87,0	1/1:1,30:31:72.20:1293,72,0	1/1:3,27:30:81.22:1392,81,0	1/1:2,16:19:48.16:877,48,0	1/1:5,36:42:99:1844,99,0	1/1:0,18:18:45.04:842,45,0	1/1:5,28:33:84.29:1569,84,0	1/1:3,37:40:84.29:1573,84,0	1/1:3,36:39:96.33:1798,96,0	0/0:26,0:25:69.22:0,69,997	1/1:1,27:28:75.26:1405,75,0	1/1:4,23:28:75.20:1310,75,0	1/1:0,17:17:51.13:919,51,0	1/1:1,28:29:78.27:1461,78,0	1/1:1,32:33:78.27:1461,78,0	1/1:3,19:22:51.17:945,51,0	1/1:5,23:28:60.21:1124,60,0	1/1:1,22:23:57.20:1068,57,0	1/1:2,22:24:66.21:1199,66,0	1/1:1,25:26:69.24:1272,69,0	1/1:2,9:11:27.09:506,27,0
chr10	45294012	.	A	AGCCTGGCCCTGTGCTCCT	864.44	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-0.267;DP=793;FS=0.000;HRun=0;HaplotypeScore=364.9191;InbreedingCoeff=0.9604;MQ=76.36;MQ0=0;MQRankSum=-3.435;QD=123.49;ReadPosRankSum=0.452;VQSLOD=2.5549;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,126,5940	1/1:2,1:7:12.04:950,12,0	0/0:18,0:18:51.16:0,51,1889	0/0:20,0:20:38.61:0,39,1494	0/0:22,0:22:60.21:0,60,2858	0/0:26,0:26:75.24:0,75,3394	0/0:34,0:34:96.27:0,96,4085	0/0:27,0:27:75.26:0,75,2912	0/0:25,0:25:63.20:0,63,2933	0/0:26,0:26:75.25:0,75,3283	0/0:14,0:14:36.11:0,36,1505	0/0:48,0:48:99:0,138,6175	0/0:43,0:43:99:0,126,5713	0/0:34,0:34:96.32:0,96,4712	0/0:28,0:28:84.27:0,84,3814	0/0:33,0:33:96.30:0,96,4325	0/0:35,0:35:99:0,102,4483	0/0:36,0:36:99:0,99,4632	0/0:26,0:26:72.24:0,72,2989	0/0:14,0:14:39.10:0,39,1751	0/0:60,0:60:99:0,178,8222	0/0:25,0:25:72.05:0,72,3011	0/0:16,0:16:48.16:0,48,2239	0/0:41,0:41:99:0,117,5264	0/0:20,0:20:60.18:0,60,2558	0/0:34,0:34:90.31:0,90,4273	0/0:28,0:28:75.24:0,75,3447	0/0:6,0:6:18.06:0,18,926
chr10	45297316	.	C	CA	8323.47	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=11.303;DP=647;FS=6.068;HRun=1;HaplotypeScore=91.4805;InbreedingCoeff=0.9993;MQ=92.74;MQ0=0;MQRankSum=-1.849;QD=42.04;ReadPosRankSum=0.923;VQSLOD=4.8068;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,120,1566	0/0:10,0:10:30.09:0,30,401	0/0:32,0:32:73.68:0,74,1077	0/0:24,0:24:65.46:0,65,856	0/0:23,0:23:69.17:0,69,888	1/1:0,16:16:45.15:717,45,0	1/1:0,18:18:54.18:861,54,0	1/1:0,32:33:96.08:1347,96,0	0/0:24,0:24:72.23:0,72,991	1/1:0,22:22:63.16:932,63,0	1/1:1,13:14:30.10:475,30,0	0/0:29,0:29:84.26:0,84,1134	0/0:22,0:22:66.17:0,66,880	0/0:28,0:28:84.27:0,84,1159	1/1:0,19:20:53.98:861,54,0	1/1:0,21:21:54.18:861,54,0	0/0:36,0:36:99:0,108,1488	1/1:1,23:24:66.22:1052,66,0	0/0:29,0:29:81.24:0,81,1092	0/0:15,0:15:39.08:0,39,522	0/0:37,0:36:99:0,105,1426	0/0:21,0:21:63.20:0,63,861	0/0:11,0:11:24.08:0,24,336	0/0:30,0:30:87.22:0,87,1146	1/1:1,12:13:30.10:478,30,0	1/1:1,16:17:48.14:739,48,0	0/0:29,0:29:81.25:0,81,1095	0/0:9,0:9:27.07:0,27,358
chr10	45298704	.	ACTC	A	620.65	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.621;DP=758;FS=9.064;HRun=0;HaplotypeScore=103.5225;InbreedingCoeff=0.9992;MQ=82.00;MQ0=0;MQRankSum=-4.121;QD=34.48;ReadPosRankSum=-0.690;VQSLOD=3.5830;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,114,2355	1/1:1,17:18:45.15:716,45,0	0/0:23,0:23:69.22:0,69,1410	0/0:19,0:19:45.15:0,45,888	0/0:11,0:11:33.11:0,33,727	0/0:13,0:13:39.13:0,39,853	0/0:34,0:34:87.21:0,87,1763	0/0:27,0:27:60.19:0,60,1210	0/0:30,0:30:87.30:0,87,1916	0/0:24,0:24:69.22:0,69,1446	0/0:19,0:19:54.17:0,54,1144	0/0:43,0:43:99:0,117,2473	0/0:36,0:36:99:0,108,2221	0/0:34,0:34:99:0,99,2084	0/0:24,0:24:66.23:0,66,1431	0/0:22,0:22:66.21:0,66,1415	0/0:35,0:35:99:0,105,2299	0/0:38,0:38:99:0,108,2314	0/0:16,0:16:39.12:0,39,797	0/0:11,0:11:33.11:0,33,725	0/0:103,0:103:99:0,286,6104	0/0:17,0:17:48.16:0,48,1046	0/0:17,0:17:48.15:0,48,1009	0/0:21,0:21:60.16:0,60,1212	0/0:24,0:24:69.21:0,69,1438	0/0:28,0:28:81.28:0,81,1774	0/0:19,0:19:57.20:0,57,1258	0/0:13,0:13:36.12:0,36,775
chr10	45301912	.	AACTAAGAC	A	660.88	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.977;DP=884;FS=1.242;HRun=0;HaplotypeScore=207.2323;InbreedingCoeff=0.9977;MQ=62.32;MQ0=6;MQRankSum=-5.000;QD=60.08;ReadPosRankSum=1.376;VQSLOD=3.7661;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,156,6584	1/1:2,9:10:27.09:755,27,0	0/0:16,0:11:33.11:0,33,1366	0/0:22,0:19:54.19:0,54,2240	0/0:28,0:28:81.28:0,81,3485	0/0:25,0:25:66.23:0,66,2840	0/0:34,0:33:90.18:0,90,3543	0/0:40,0:35:93.25:0,93,3633	0/0:36,0:36:99:0,105,4532	0/0:38,0:38:99:0,111,4713	0/0:18,0:18:51.18:0,51,2217	0/0:48,0:48:99:0,135,5876	0/0:28,0:28:78.27:0,78,3304	0/0:35,0:35:99:0,99,3939	0/0:57,0:56:99:0,172,7230	0/0:31,0:31:87.30:0,87,3690	0/0:30,0:30:90.31:0,90,3678	0/0:28,0:28:81.19:0,81,3243	0/0:23,0:20:54.10:0,54,2152	0/0:29,0:27:81.28:0,81,3428	0/0:68,0:68:99:0,193,8115	0/0:32,0:32:90.31:0,90,3937	0/0:20,0:19:51.18:0,51,2164	0/0:27,0:27:75.26:0,75,3240	0/0:28,0:28:81.28:0,81,3548	0/0:36,0:36:99:0,99,4295	0/0:32,0:32:87.29:0,87,3450	0/0:9,0:9:27.09:0,27,1147
chr10	45304686	.	T	TG	21560.65	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=1.484;DP=665;FS=0.000;HRun=3;HaplotypeScore=106.7889;InbreedingCoeff=0.9981;MQ=86.02;MQ0=0;MQRankSum=-6.078;QD=37.11;ReadPosRankSum=1.094;VQSLOD=4.3588;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,23:27:63.21:870,63,0	1/1:2,6:9:24.05:302,24,0	0/0:31,0:31:63.03:0,63,701	0/0:14,0:14:26.56:0,27,288	1/1:1,18:19:51.17:713,51,0	1/1:2,25:27:75.25:1049,75,0	1/1:2,25:27:63:853,63,0	1/1:3,25:28:75.21:1007,75,0	1/1:1,20:21:60.20:839,60,0	1/1:2,19:21:57.15:769,57,0	1/1:2,18:20:54.18:755,54,0	1/1:0,29:29:81.27:1127,81,0	1/1:2,25:27:69.23:963,69,0	1/1:2,33:35:93.31:1302,93,0	1/1:2,29:31:75.25:1050,75,0	1/1:0,20:20:57.19:798,57,0	0/0:39,0:39:99:0,114,1356	1/1:1,21:22:63.21:882,63,0	1/1:2,8:10:24.08:334,24,0	1/1:1,12:13:36.12:504,36,0	1/1:3,49:52:99:1921,138,0	1/1:2,14:16:42.14:588,42,0	1/1:3,16:19:54.18:734,54,0	1/1:1,26:27:72.24:1008,72,0	1/1:1,23:24:63.21:881,63,0	1/1:1,25:26:75.25:1050,75,0	1/1:0,14:15:45.15:628,45,0	1/1:0,16:16:45.15:630,45,0
chr10	45305822	.	A	AGATACAG	838.09	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-3.622;DP=756;FS=0.000;HRun=0;HaplotypeScore=202.2296;InbreedingCoeff=0.9957;MQ=83.52;MQ0=0;MQRankSum=-3.975;QD=76.19;ReadPosRankSum=-0.407;VQSLOD=3.2287;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,123,2899	1/1:2,9:11:24.08:931,24,0	0/0:26,0:26:39.09:0,39,626	0/0:26,0:26:52.92:0,53,922	0/0:21,0:21:60.20:0,60,1446	0/0:24,0:24:63.19:0,63,1472	0/0:21,0:21:57.20:0,57,1396	0/0:33,0:33:75.25:0,75,1760	0/0:21,0:21:63.19:0,63,1475	0/0:18,0:18:45.15:0,45,1105	0/0:11,0:11:30.08:0,30,649	0/0:38,0:38:99:0,108,2453	0/0:39,0:39:99:0,114,2645	0/0:37,0:37:99:0,105,2582	0/0:37,0:37:99:0,108,2646	0/0:35,0:35:93.31:0,93,2272	0/0:39,0:39:99:0,108,2455	0/0:22,0:22:63.22:0,63,1536	0/0:22,0:22:60.18:0,60,1358	0/0:14,0:14:30.10:0,30,749	0/0:48,0:48:99:0,123,2921	0/0:23,0:23:60.21:0,60,1498	0/0:23,0:23:66.20:0,66,1519	0/0:33,0:33:90.31:0,90,2151	0/0:18,0:18:35.90:0,36,787	0/0:22,0:22:66.22:0,66,1596	0/0:38,0:38:99:0,111,2608	0/0:11,0:11:27.09:0,27,663
chr10	45306632	.	GGT	G	7233.45	PASS	AB=0.855;AC=24;AF=0.429;AN=56;BaseQRankSum=-4.435;DP=1045;FS=0.647;HRun=0;HaplotypeScore=200.1791;InbreedingCoeff=0.8371;MQ=56.83;MQ0=25;MQRankSum=-0.130;QD=15.76;ReadPosRankSum=3.863;VQSLOD=4.8496;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,1:43:80.71:0,81,1777	0/0:21,1:22:26.53:0,27,912	0/0:36,0:8:20.69:0,21,251	0/0:45,0:7:11.64:0,12,100	1/1:18,10:27:9.72:195,10,0	0/0:8,0:27:40:0,40,387	0/0:13,0:41:83.99:0,84,868	0/0:20,0:44:85.57:0,86,765	1/1:11,37:48:84.26:1027,84,0	0/0:19,0:56:99:0,115,1094	0/0:2,0:12:21.01:0,21,202	1/1:17,44:61:92.96:1114,93,0	1/1:5,29:34:60.14:733,60,0	1/1:8,29:39:65.83:744,66,0	0/0:12,0:49:93.45:0,93,928	0/0:10,0:42:62.98:0,63,553	0/0:55,1:56:53.18:0,53,1783	0/0:7,0:35:81.03:0,81,796	0/1:17,4:19:13.21:203,0,13	1/1:18,6:24:10.05:378,10,0	1/1:71,18:88:72.31:809,72,0	1/1:6,18:24:32.45:403,32,0	1/1:4,18:22:35.76:420,36,0	1/1:4,26:30:63.20:770,63,0	0/0:6,0:28:45.01:0,45,416	0/0:15,0:46:99:0,103,945	0/1:17,3:20:20.52:245,0,21	1/1:5,13:18:17.54:192,18,0
chr10	45306652	.	T	TGGGCGC	1786.80	PASS	AB=0.788;AC=6;AF=0.107;AN=56;BaseQRankSum=1.807;DP=1009;FS=7.687;HRun=0;HaplotypeScore=294.3803;InbreedingCoeff=-0.1201;MQ=58.51;MQ0=24;MQRankSum=-7.775;QD=9.40;ReadPosRankSum=-4.542;VQSLOD=0.6754;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,138,3324	0/0:21,0:21:63.22:0,63,1550	0/0:61,0:23:59.42:0,59,1220	0/0:47,0:16:29.39:0,29,503	0/1:16,9:28:86.29:86,0,344	0/0:22,0:21:39.13:0,39,956	0/0:38,0:38:96.31:0,96,2259	0/0:42,0:42:99:0,122,2685	0/0:42,0:42:99:0,99,2398	0/0:45,0:45:99:0,130,2956	0/0:14,0:13:30.24:0,30,670	0/0:49,0:48:99:0,102,2467	0/0:38,0:38:84.25:0,84,1993	0/0:36,0:36:78.27:0,78,1832	0/0:49,0:49:99:0,111,2607	0/0:35,0:35:78.04:0,78,1855	0/0:45,0:45:99:0,135,2990	0/0:38,0:36:93.28:0,93,2205	0/1:15,9:23:99:591,0,438	0/1:14,3:19:99:172,0,480	0/1:77,5:83:99:354,0,1230	0/0:24,0:24:48.39:0,48,1148	0/0:22,0:22:42.14:0,42,1017	0/0:33,0:33:81.28:0,81,1939	0/0:28,0:28:66.21:0,66,1535	0/0:43,0:43:99:0,119,2779	0/1:10,8:20:99:568,0,374	0/1:13,1:14:99:140,0,373
chr10	45307298	.	CA	C	1774.67	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=8.048;DP=806;FS=5.217;HRun=2;HaplotypeScore=76.4115;InbreedingCoeff=0.9998;MQ=84.94;MQ0=0;MQRankSum=-5.925;QD=35.49;ReadPosRankSum=3.270;VQSLOD=4.3372;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,49:50:99:1870,144,0	0/0:16,0:16:48.16:0,48,719	0/0:26,0:26:72.24:0,72,1060	0/0:30,0:30:83.28:0,83,1193	0/0:15,0:15:45.14:0,45,654	0/0:14,0:14:42.14:0,42,629	0/0:27,0:27:81.23:0,81,1136	0/0:37,0:37:99:0,105,1551	0/0:32,0:32:96.32:0,96,1434	0/0:23,0:23:66.22:0,66,989	0/0:14,0:14:39.12:0,39,567	0/0:41,0:41:99:0,123,1815	0/0:41,0:41:99:0,123,1804	0/0:36,0:36:99:0,108,1598	0/0:49,0:49:99:0,147,2180	0/0:43,0:43:99:0,126,1780	0/0:14,0:14:42.14:0,42,630	0/0:38,0:38:99:0,111,1598	0/0:23,0:23:69.23:0,69,1024	0/0:21,0:21:60.13:0,60,833	0/0:64,0:64:99:0,193,2836	0/0:18,0:18:51.17:0,51,759	0/0:18,0:18:51.17:0,51,752	0/0:31,0:31:87.25:0,87,1279	0/0:20,0:20:60.20:0,60,884	0/0:22,0:22:63.20:0,63,910	0/0:30,0:29:84.28:0,84,1253	0/0:13,0:13:39.13:0,39,584
chr10	45308377	.	A	AC	479.74	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-5.613;DP=825;FS=5.320;HRun=4;HaplotypeScore=73.0943;InbreedingCoeff=0.9999;MQ=80.06;MQ0=0;MQRankSum=-1.871;QD=28.22;ReadPosRankSum=-1.741;VQSLOD=2.6279;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,138,1565	1/1:0,17:17:42.14:575,42,0	0/0:18,0:18:42.06:0,42,453	0/0:21,0:21:52.46:0,52,568	0/0:28,0:28:81.21:0,81,908	0/0:18,0:18:48.10:0,48,524	0/0:26,0:26:63.18:0,63,715	0/0:42,0:42:99:0,108,1225	0/0:37,0:37:99:0,105,1191	0/0:37,0:37:99:0,99,1117	0/0:21,0:21:63.18:0,63,715	0/0:37,0:37:99:0,105,1181	0/0:35,0:35:99:0,99,1123	0/0:29,0:29:84.24:0,84,952	0/0:50,0:50:99:0,138,1565	0/0:41,0:41:99:0,114,1293	0/0:30,0:30:87.23:0,87,977	0/0:18,0:18:54.14:0,54,601	0/0:26,0:26:57.16:0,57,647	0/0:19,0:19:57.16:0,57,645	0/0:30,0:30:90.26:0,90,1020	0/0:23,0:23:66.19:0,66,749	0/0:16,0:16:45.13:0,45,510	0/0:26,0:26:72.19:0,72,806	0/0:32,0:32:90.20:0,90,987	0/0:43,0:43:99:0,120,1349	0/0:36,0:35:99:0,102,1123	0/0:17,0:17:48.11:0,48,532
chr10	45310361	.	A	AC	24322.11	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-6.923;DP=656;FS=3.841;HRun=1;HaplotypeScore=67.5949;InbreedingCoeff=0.9620;MQ=84.08;MQ0=0;MQRankSum=-8.128;QD=41.22;ReadPosRankSum=3.761;VQSLOD=5.5227;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,37:38:99:1618,108,0	1/1:1,7:8:21.07:306,21,0	0/0:30,0:30:77.60:0,78,929	0/0:9,0:9:27.08:0,27,335	1/1:1,27:28:72.24:1079,72,0	1/1:0,20:20:48.16:720,48,0	1/1:1,31:32:81.27:1203,81,0	1/1:2,30:32:90.29:1323,90,0	1/1:1,22:23:66.22:987,66,0	1/1:0,14:14:42.13:611,42,0	1/1:1,17:18:48.16:719,48,0	1/1:0,31:31:81.27:1212,81,0	1/1:0,19:19:57.19:854,57,0	1/1:0,31:31:93.32:1394,93,0	1/1:0,23:23:69.23:1034,69,0	1/1:0,19:19:48.16:719,48,0	0/0:27,0:27:78.25:0,78,1012	1/1:0,22:22:66.22:989,66,0	1/1:2,28:30:84.27:1238,84,0	1/1:1,18:19:48.16:718,48,0	1/1:0,34:34:99:1484,99,0	1/1:1,18:19:51.17:764,51,0	1/1:0,19:19:51.17:764,51,0	1/1:2,41:42:99:1664,111,0	1/1:1,22:23:63.21:944,63,0	1/1:0,22:22:63.21:943,63,0	1/1:0,21:21:63.21:944,63,0	1/1:0,2:2:6.02:90,6,0
chr10	45311032	.	GA	G	9936.80	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-14.292;DP=965;FS=0.533;HRun=2;HaplotypeScore=265.3273;InbreedingCoeff=0.9999;MQ=79.72;MQ0=0;MQRankSum=2.129;QD=36.00;ReadPosRankSum=1.300;VQSLOD=3.9508;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,54:54:99:1869,144,0	1/1:0,19:19:48.16:622,48,0	0/0:33,0:33:99:0,99,1445	0/0:20,0:20:59.23:0,59,838	1/1:0,23:23:63.20:817,63,0	0/0:12,0:12:32.71:0,33,235	0/0:41,0:41:80.81:0,81,677	0/0:25,0:25:75.25:0,75,1104	0/0:38,0:38:99:0,109,799	0/0:35,0:35:92.03:0,92,633	0/0:21,0:21:62.23:0,62,435	0/0:45,0:45:99:0,131,945	0/0:46,0:46:99:0,124,980	0/0:44,0:44:99:0,120,933	0/0:50,0:50:99:0,135,1023	0/0:50,0:50:99:0,127,979	0/0:40,0:40:99:0,111,1642	0/0:28,0:28:74.01:0,74,536	1/1:0,25:25:75.22:946,75,0	1/1:3,25:28:72.23:933,72,0	1/1:1,91:92:99:3427,265,0	0/0:34,0:34:77.83:0,78,623	0/0:25,0:25:69.08:0,69,535	0/0:39,0:39:99:0,104,777	0/0:26,0:26:77.01:0,77,537	0/0:37,0:37:99:0,108,1571	1/1:0,19:19:54.18:700,54,0	1/1:0,16:16:48.16:623,48,0
chr10	45311180	.	TGAAAG	T	23439.20	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=17.860;DP=829;FS=3.872;HRun=0;HaplotypeScore=166.1439;InbreedingCoeff=0.9997;MQ=76.26;MQ0=0;MQRankSum=-7.408;QD=49.45;ReadPosRankSum=5.226;VQSLOD=4.8077;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,132,4004	0/0:10,0:10:30.03:0,30,668	0/0:16,0:16:42.14:0,42,1179	0/0:24,0:24:69.23:0,69,2026	0/0:27,0:27:81.26:0,81,2431	1/1:0,21:21:48.16:1041,48,0	1/1:2,31:33:57.12:1231,57,0	0/0:24,0:24:69.23:0,69,2014	1/1:1,37:38:96.33:2059,96,0	1/1:0,32:32:90.20:1773,90,0	1/1:1,18:19:35.68:719,36,0	1/1:1,35:36:99:2101,99,0	1/1:3,35:38:99:2109,99,0	1/1:0,43:43:99:2231,105,0	1/1:1,40:41:99:2126,102,0	1/1:1,43:44:99:2165,102,0	0/0:32,0:32:96.30:0,96,2835	1/1:1,27:28:69.24:1485,69,0	0/0:22,0:22:63.19:0,63,1848	0/0:23,0:23:66.13:0,66,1762	0/0:67,0:67:99:0,199,6081	1/1:1,24:25:53.65:1108,54,0	1/1:0,13:13:27.09:571,27,0	1/1:1,27:28:53.03:1170,53,0	1/1:0,35:35:72.25:1550,72,0	0/0:36,0:36:99:0,99,2953	0/0:19,0:19:57.20:0,57,1787	0/0:11,0:11:30.10:0,30,911
chr10	45311801	.	GGAA	G	4608.19	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-0.253;DP=844;FS=0.362;HRun=0;HaplotypeScore=225.4545;InbreedingCoeff=0.9953;MQ=50.43;MQ0=17;MQRankSum=-2.897;QD=30.32;ReadPosRankSum=1.199;VQSLOD=4.4131;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:35,0:35:62.11:776,62,0	1/1:6,1:7:17.15:153,17,0	0/0:27,0:6:17.40:0,17,230	0/0:44,1:14:20.83:0,21,396	1/1:3,12:15:24.08:385,24,0	0/0:26,0:26:75.24:0,75,1594	0/0:36,0:36:99:0,99,1916	0/0:40,0:36:90.25:0,90,1836	0/0:46,0:46:99:0,117,2419	0/0:35,0:35:96.31:0,96,1927	0/0:16,0:16:48.12:0,48,981	0/0:44,0:44:99:0,111,2152	0/0:41,0:41:99:0,111,2233	0/0:36,0:36:93.28:0,93,1872	0/0:42,0:41:99:0,120,2384	0/0:31,0:31:90.24:0,90,1868	0/0:35,0:35:99:0,105,2164	0/0:36,0:36:53.84:0,54,1628	1/1:5,11:14:36.09:543,36,0	1/1:4,8:12:24.08:385,24,0	1/1:10,17:28:60.03:837,60,0	0/0:33,0:31:81.24:0,81,1628	0/0:20,0:19:57.20:0,57,1231	0/0:50,0:49:86.49:0,86,2008	0/0:22,0:21:39.99:0,40,1075	0/0:31,0:31:90.28:0,90,1825	1/1:5,20:25:69.12:1002,69,0	1/1:1,13:13:33.11:527,33,0
chr10	45311807	.	AGAG	A	3004.54	PASS	AB=1.000;AC=14;AF=0.250;AN=56;BaseQRankSum=2.728;DP=839;FS=1.215;HRun=0;HaplotypeScore=234.9429;InbreedingCoeff=0.8480;MQ=50.06;MQ0=15;MQRankSum=-0.158;QD=20.44;ReadPosRankSum=2.947;VQSLOD=3.6428;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,25:36:70.34:1411,70,0	0/1:7,0:7:5.90:30,0,6	0/0:27,0:7:20.89:0,21,287	0/0:47,1:11:29.54:0,30,397	1/1:14,0:14:23.89:185,24,0	0/0:28,0:28:84.20:0,84,1658	0/0:36,0:36:96.14:0,96,1826	0/0:37,0:33:99:0,99,2020	0/0:49,0:49:99:0,129,2500	0/0:31,0:31:90.27:0,90,1846	0/0:17,0:17:48.16:0,48,990	0/0:43,0:43:99:0,111,2019	0/0:38,0:38:99:0,108,2138	0/0:33,0:33:93.24:0,93,1836	0/0:44,0:44:99:0,126,2469	0/0:32,0:32:93.30:0,93,2017	0/0:36,0:36:99:0,108,2313	0/0:34,0:34:70.02:0,70,1701	1/1:14,0:12:32.35:266,32,0	0/1:11,0:11:6.03:171,0,6	1/1:27,0:27:17.92:338,18,0	0/0:34,0:32:87.28:0,87,1718	0/0:20,0:19:57.19:0,57,1167	0/0:54,0:53:99:0,103,2078	0/0:19,0:18:52.72:0,53,1072	0/0:31,0:31:90.27:0,90,1956	1/1:24,0:24:61.82:495,62,0	1/1:14,0:13:33:301,33,0
chr10	45311827	.	AAG	A	2242.35	PASS	AB=0.791;AC=8;AF=0.143;AN=56;BaseQRankSum=6.704;DP=885;FS=17.759;HRun=0;HaplotypeScore=232.1546;InbreedingCoeff=-0.1632;MQ=48.80;MQ0=18;MQRankSum=-9.400;QD=8.12;ReadPosRankSum=1.508;VQSLOD=2.0488;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:87.06:0,87,1562	0/1:7,0:7:7.09:7,0,299	0/0:49,1:7:18.04:0,18,252	0/0:72,0:13:39.13:0,39,627	0/0:14,0:14:36.12:0,36,609	0/0:27,0:27:75.26:0,75,1336	0/0:37,0:37:99:0,105,1866	0/0:40,0:38:87.19:0,87,1419	0/1:31,17:48:99:452,0,1343	0/0:30,0:30:84.29:0,84,1486	0/0:14,0:14:39.13:0,39,700	0/1:25,14:39:99:321,0,1065	0/1:26,12:38:99:312,0,1183	0/1:21,10:31:99:395,0,829	0/0:43,0:43:99:0,120,2092	0/0:37,0:37:99:0,111,1959	0/0:35,0:35:69.93:0,70,1632	0/0:32,0:31:52.58:0,53,1375	0/0:10,0:10:30.07:0,30,490	0/0:12,0:12:27.09:0,27,484	0/0:25,0:25:50.53:0,51,837	0/1:21,16:35:99:328,0,965	0/1:16,7:22:99:189,0,729	0/1:45,8:52:99:373,0,1573	0/0:20,0:20:58.08:0,58,1010	0/0:29,0:29:84.29:0,84,1466	0/0:27,0:27:78.27:0,78,1379	0/0:12,0:12:36.12:0,36,645
chr10	45311842	.	AGAG	A	953.42	PASS	AB=0.983;AC=15;AF=0.268;AN=56;BaseQRankSum=13.860;DP=888;FS=0.000;HRun=0;HaplotypeScore=241.8034;InbreedingCoeff=-0.1938;MQ=48.10;MQ0=16;MQRankSum=-13.760;QD=2.42;ReadPosRankSum=0.178;VQSLOD=2.3475;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:42,0:42:99:167,0,286	1/1:9,0:9:16.77:80,17,0	0/0:54,0:5:9.03:0,9,149	0/0:82,0:15:30.02:0,30,521	0/1:12,0:12:61.71:62,0,122	0/0:27,0:27:81.24:0,81,1609	0/0:33,0:33:96.33:0,96,1964	0/0:31,0:29:66.21:0,66,1224	0/1:47,1:48:99:154,0,1862	0/0:36,0:35:99:0,102,1936	0/0:12,0:12:30.09:0,30,587	0/1:37,1:38:56.99:57,0,1495	0/1:33,1:34:64.99:65,0,1281	0/1:30,3:33:93.61:94,0,1174	0/0:37,0:37:99:0,105,2125	0/0:35,0:35:99:0,99,1988	0/0:38,0:38:97.13:0,97,1869	0/0:33,0:32:86.52:0,87,1728	0/1:11,0:11:18.38:18,0,198	0/1:11,0:11:37.10:37,0,200	0/1:29,0:29:18.77:19,0,356	0/1:33,1:32:49.65:50,0,1206	0/0:25,1:25:10.03:0,10,1026	0/1:53,2:53:95.72:96,0,2194	0/0:22,0:22:63.17:0,63,1262	0/0:28,0:28:81.28:0,81,1678	0/1:26,0:26:97.77:156,0,98	0/1:12,0:12:62.07:62,0,128
chr10	45311845	.	GGAGGAA	G	4256.80	PASS	AB=0.622;AC=15;AF=0.278;AN=54;BaseQRankSum=-0.508;DP=882;FS=7.831;HRun=0;HaplotypeScore=272.4407;InbreedingCoeff=0.9025;MQ=48.49;MQ0=15;MQRankSum=-11.843;QD=28.19;ReadPosRankSum=0.681;VQSLOD=3.2996;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,34:46:51.04:1214,51,0	1/1:1,8:9:18.06:386,18,0	./.	0/0:77,0:15:24.34:0,24,506	1/1:5,7:12:17.78:367,18,0	0/0:28,0:28:72.25:0,72,1955	0/0:35,0:35:87.25:0,87,2245	0/0:34,0:32:45.08:0,45,963	0/0:44,0:47:99:0,111,2797	0/0:36,0:35:87.30:0,87,2187	0/0:12,0:12:27.09:0,27,754	0/0:38,0:38:79.98:0,80,2089	0/0:32,0:32:69.08:0,69,1683	0/0:33,0:33:59.86:0,60,1559	0/0:36,0:36:90.30:0,90,2407	0/0:34,0:34:90.30:0,90,2432	0/0:37,0:37:90.29:0,90,2551	0/0:33,0:32:78.27:0,78,2047	1/1:7,3:10:15.01:248,15,0	1/1:8,4:12:15.05:276,15,0	0/1:11,17:28:13.03:240,0,13	0/0:34,0:33:62.80:0,63,1738	0/0:26,0:25:57.18:0,57,1415	0/0:55,0:54:99:0,100,2874	0/0:21,0:21:51.14:0,51,1436	0/0:29,0:29:75.24:0,75,2137	1/1:5,18:23:51.15:1036,51,0	1/1:4,7:11:24.08:489,24,0
chr10	45311861	.	GA	G	353.66	PASS	AB=0.943;AC=10;AF=0.179;AN=56;BaseQRankSum=11.252;DP=828;FS=7.185;HRun=2;HaplotypeScore=185.8696;InbreedingCoeff=0.4151;MQ=49.27;MQ0=14;MQRankSum=-11.291;QD=2.68;ReadPosRankSum=2.764;VQSLOD=-0.1685;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:41,3:44:40.14:175,0,40	1/1:8,0:8:10.90:31,11,0	0/0:47,0:5:12.01:0,12,157	0/0:68,1:15:19.18:0,19,453	1/1:7,0:7:2.07:12,2,0	0/0:31,0:31:90.30:0,90,1349	0/0:36,0:36:99:0,108,1514	0/0:23,0:22:57.10:0,57,782	0/0:43,0:43:99:0,123,1814	0/0:36,0:35:99:0,105,1547	0/0:12,0:12:36.12:0,36,540	0/0:38,0:38:98.06:0,98,1445	0/0:25,0:25:72.05:0,72,982	0/0:29,0:29:71.90:0,72,1054	0/0:32,0:32:96.32:0,96,1433	0/0:32,0:32:96.31:0,96,1415	0/0:39,0:39:99:0,105,1553	0/0:32,0:31:93.79:0,94,1392	0/1:12,1:13:65.58:66,0,213	0/0:10,1:11:5.38:0,5,95	0/1:29,0:29:14.68:15,0,198	0/0:32,0:32:78.25:0,78,1143	0/0:20,0:20:57.18:0,57,829	0/0:55,0:53:99:0,146,1962	0/0:21,0:21:60.18:0,60,860	0/0:33,0:33:96.31:0,96,1398	1/1:21,0:21:31.98:150,32,0	0/1:9,1:10:53.83:54,0,65
chr10	45311865	.	AGG	A	59.75	PASS	AB=0.978;AC=8;AF=0.143;AN=56;BaseQRankSum=12.393;DP=807;FS=0.000;HRun=2;HaplotypeScore=192.0667;InbreedingCoeff=0.2852;MQ=49.87;MQ0=13;MQRankSum=-11.807;QD=0.42;ReadPosRankSum=3.913;VQSLOD=-0.4051;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:44,0:44:25.85:26,0,194	1/1:8,0:8:10.64:27,11,0	0/0:44,2:4:12.04:0,12,239	0/0:59,2:16:12.92:0,13,557	1/1:7,0:7:1.23:9,1,0	0/0:34,0:34:92.32:0,92,1121	0/0:34,0:34:99:0,102,1243	0/0:22,0:21:54.16:0,54,988	0/0:44,0:44:99:0,117,1437	0/0:34,0:34:96.25:0,96,1178	0/0:13,0:13:36.11:0,36,452	0/0:34,0:34:92.10:0,92,1171	0/0:23,0:23:61.95:0,62,782	0/0:24,0:24:69.20:0,69,871	0/0:34,0:34:96.29:0,96,1179	0/0:32,0:32:93.27:0,93,1132	0/0:39,0:39:99:0,107,2122	0/0:31,1:31:61.34:0,61,1106	0/0:12,0:12:20.05:0,20,377	0/0:10,0:10:13.11:0,13,259	0/0:30,0:30:8.29:0,8,435	0/0:34,0:34:78.24:0,78,999	0/0:18,0:18:54.13:0,54,655	0/1:48,5:51:67.20:67,0,1454	0/0:22,0:22:62.93:0,63,789	0/0:32,0:32:96.31:0,96,1813	0/1:21,0:21:48.74:49,0,87	0/1:10,0:10:10.88:11,0,85
chr10	45313866	.	TTA	T	4509.53	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=13.386;DP=651;FS=8.883;HRun=0;HaplotypeScore=196.9382;InbreedingCoeff=0.9967;MQ=81.21;MQ0=0;MQRankSum=-13.182;QD=27.33;ReadPosRankSum=3.731;VQSLOD=5.5990;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,120,2246	0/0:7,0:7:21.07:0,21,393	0/0:26,0:26:63.34:0,63,1012	0/0:21,0:21:24.84:0,25,735	0/0:26,0:26:72.25:0,72,1330	1/1:7,7:13:24.08:346,24,0	1/1:10,12:22:39.13:563,39,0	0/0:39,0:38:99:0,111,2060	0/0:23,0:23:69.22:0,69,1223	1/1:12,12:24:35.77:520,36,0	1/1:4,9:13:21.07:297,21,0	0/0:28,0:28:66.23:0,66,1199	0/0:28,0:28:72.25:0,72,1334	0/0:14,0:14:36.12:0,36,669	1/1:7,23:29:60.20:863,60,0	1/1:8,20:28:60.20:863,60,0	0/0:24,0:24:72.25:0,72,1334	1/1:2,11:13:33.11:483,33,0	0/0:21,0:21:54.19:0,54,1005	0/0:28,0:28:84.27:0,84,1541	0/0:39,0:39:99:0,108,1970	0/0:11,0:11:24.08:0,24,444	0/0:13,0:13:24.06:0,24,403	0/0:15,0:15:22.40:0,22,400	1/1:8,13:21:42.12:575,42,0	0/0:31,0:31:90.31:0,90,1686	0/0:38,0:38:99:0,111,2069	0/0:12,0:12:36.11:0,36,619
chr10	45313873	.	A	AC	5442.05	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=18.829;DP=531;FS=7.048;HRun=0;HaplotypeScore=170.1055;InbreedingCoeff=0.9948;MQ=85.70;MQ0=0;MQRankSum=-17.698;QD=28.05;ReadPosRankSum=6.592;VQSLOD=4.0722;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,123,1716	0/0:8,0:8:24.06:0,24,317	0/0:25,0:25:56.05:0,56,746	0/0:19,0:19:42.46:0,42,505	0/0:26,0:26:75.25:0,75,1049	1/1:0,7:6:18.03:177,18,0	1/1:0,12:12:35.96:336,36,0	0/0:34,0:33:99:0,99,1354	1/1:2,17:19:56.60:559,57,0	1/1:0,12:12:35.92:366,36,0	1/1:1,7:8:20.99:188,21,0	1/1:1,15:16:48.10:497,48,0	1/1:0,22:24:69.12:696,69,0	1/1:1,9:10:29.41:273,29,0	1/1:1,20:20:57.09:552,57,0	1/1:0,20:20:57.06:545,57,0	0/0:24,0:24:72.24:0,72,1007	1/1:0,11:11:33.08:343,33,0	0/0:21,0:21:60.20:0,60,838	0/0:27,0:27:81.26:0,81,1115	0/0:34,0:34:99:0,102,1423	1/1:0,6:6:18.03:177,18,0	1/1:1,7:8:24.04:250,24,0	1/1:1,6:7:16.28:130,16,0	1/1:0,13:13:38.10:354,38,0	0/0:30,0:30:90.26:0,90,1236	0/0:35,0:35:99:0,105,1432	0/0:13,0:13:36.12:0,36,502
chr10	45313874	.	T	TCCTGG	14606.71	PASS	AB=1.000;AC=31;AF=0.554;AN=56;BaseQRankSum=18.574;DP=527;FS=10.082;HRun=0;HaplotypeScore=174.8760;InbreedingCoeff=0.9550;MQ=85.17;MQ0=0;MQRankSum=-17.172;QD=68.58;ReadPosRankSum=6.605;VQSLOD=5.5156;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,123,2842	0/0:8,0:8:21.07:0,21,477	0/0:23,0:24:37.18:0,37,982	0/1:19,0:19:0.73:1,0,718	0/0:26,0:26:75.26:0,75,1729	1/1:1,6:6:18.06:491,18,0	1/1:0,12:12:36.12:962,36,0	0/0:34,0:34:99:0,99,2233	1/1:2,17:19:57.19:1433,57,0	1/1:0,12:12:36.12:961,36,0	1/1:2,6:8:21.07:566,21,0	1/1:2,15:17:48.15:1218,48,0	1/1:3,20:24:69.24:1789,69,0	1/1:1,9:10:30.10:741,30,0	1/1:1,19:19:57.19:1492,57,0	1/1:0,20:20:57.20:1541,57,0	0/0:24,0:24:72.25:0,72,1655	1/1:0,11:11:33.11:902,33,0	0/0:21,0:21:63.19:0,63,1347	0/0:26,0:26:78.27:0,78,1787	0/0:34,0:34:99:0,102,2284	1/1:0,6:6:18.06:475,18,0	1/1:1,7:8:24.08:626,24,0	1/1:1,6:7:15.05:382,15,0	1/1:0,13:13:39.13:1027,39,0	0/0:30,0:30:90.31:0,90,2061	0/0:33,0:33:99:0,99,2303	0/0:13,0:13:39.11:0,39,848
chr10	45317978	.	TC	T	11519.54	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=11.207;DP=738;FS=0.277;HRun=6;HaplotypeScore=82.0062;InbreedingCoeff=0.9988;MQ=79.53;MQ0=0;MQRankSum=-2.732;QD=29.09;ReadPosRankSum=3.357;VQSLOD=5.3633;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,153,1981	0/0:12,0:12:36.12:0,36,474	0/0:32,0:31:39.58:0,40,925	0/0:25,0:23:28.47:0,28,668	0/0:20,0:20:57.16:0,57,708	1/1:0,9:9:24.06:258,24,0	1/1:1,32:33:87:920,87,0	0/0:26,0:26:72.22:0,72,922	1/1:0,24:24:69.12:728,69,0	1/1:0,25:25:69.15:732,69,0	1/1:0,9:9:21.05:226,21,0	1/1:0,25:25:66.17:709,66,0	1/1:0,29:29:84.21:902,84,0	1/1:1,40:41:99:1191,111,0	1/1:1,43:44:99:1322,123,0	1/1:0,30:30:87.69:935,88,0	0/0:35,0:35:99:0,102,1342	1/1:2,21:23:57.14:612,57,0	0/0:18,0:18:42.13:0,42,542	0/0:16,0:16:30.06:0,30,351	0/0:48,0:48:99:0,135,1731	1/1:0,22:22:63.12:664,63,0	1/1:1,20:21:57.14:611,57,0	1/1:1,36:37:96.24:1031,96,0	1/1:2,22:24:63.16:677,63,0	0/0:21,1:22:27.94:0,28,717	0/0:21,0:21:54.18:0,54,706	0/0:13,0:13:33.11:0,33,434
chr10	45319233	.	ATGCATGGTCCCT	A	4297.40	PASS	AB=0.538;AC=3;AF=0.054;AN=56;BaseQRankSum=10.063;DP=749;FS=1.976;HRun=0;HaplotypeScore=276.7974;InbreedingCoeff=0.6460;MQ=71.08;MQ0=0;MQRankSum=-7.776;QD=87.70;ReadPosRankSum=-0.421;VQSLOD=4.3518;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:58:99:0,160,8957	0/0:9,0:9:27.09:0,27,1392	0/0:12,0:12:27.09:0,27,1430	0/0:11,0:11:30.10:0,30,1667	0/0:24,0:24:68.76:0,69,3929	0/0:12,0:12:36.12:0,36,2025	0/0:35,0:35:99:0,102,5569	1/1:2,19:21:57.19:1824,57,0	0/0:25,0:25:75.26:0,75,4568	0/0:30,0:30:83.98:0,84,4657	0/0:11,0:11:33.11:0,33,1951	0/0:38,0:38:99:0,114,6849	0/0:36,0:36:99:0,108,6364	0/0:36,0:36:99:0,99,5828	0/0:32,0:32:96.33:0,96,5413	0/0:27,0:27:78.27:0,78,4432	0/0:39,0:39:99:0,117,6637	0/0:25,0:25:75.26:0,75,4210	0/0:22,0:22:63.22:0,63,2926	0/0:18,0:18:54.17:0,54,2918	0/0:49,0:49:99:0,144,8118	0/0:26,0:26:78.27:0,78,4626	0/0:19,0:19:57.20:0,57,3269	0/0:34,0:34:99:0,102,5992	0/0:24,0:24:69.24:0,69,4070	0/1:4,24:28:99:2473,0,291	0/0:36,0:36:99:0,108,6284	0/0:12,0:12:27.09:0,27,1430
chr10	45322602	.	T	TACCGCCTCACCCTGCGAG	56207.69	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=0.045;DP=849;FS=8.695;HRun=0;HaplotypeScore=385.7055;InbreedingCoeff=0.9109;MQ=66.50;MQ0=0;MQRankSum=-11.136;QD=73.00;ReadPosRankSum=-1.295;VQSLOD=3.3168;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:29,5:35:39.07:2418,39,0	1/1:8,5:16:21.16:1436,21,0	0/0:31,0:31:51.10:0,51,1754	0/0:16,0:16:30.06:0,30,772	1/1:15,6:22:8.94:292,9,0	1/1:20,1:21:15.05:1073,15,0	1/1:29,4:33:39.13:2469,39,0	1/1:35,0:35:74.62:2914,75,0	1/1:28,10:38:48.16:3407,48,0	1/1:23,5:30:60.21:3124,60,0	1/1:11,0:11:10.28:294,10,0	1/1:45,7:52:87.30:5083,87,0	1/1:31,11:44:72.25:5270,72,0	1/1:21,9:32:36.12:2788,36,0	1/1:35,13:49:63.22:4405,63,0	1/1:36,10:49:66.23:4539,66,0	0/0:32,0:32:78.21:0,78,3252	1/1:25,4:30:23.88:1544,24,0	1/1:24,3:27:36.02:1192,36,0	1/1:20,3:25:25.28:1314,25,0	1/1:41,0:41:24.05:1371,24,0	1/1:23,5:29:31.78:1662,32,0	1/1:11,1:13:6.02:489,6,0	1/1:17,8:29:24.93:1343,25,0	1/1:34,0:34:36.10:1771,36,0	1/1:34,3:37:36.12:2479,36,0	1/1:21,6:27:36.12:2570,36,0	1/1:6,4:10:12.04:963,12,0
chr10	45323742	.	AC	A	13876.33	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=21.247;DP=759;FS=12.974;HRun=3;HaplotypeScore=117.3840;InbreedingCoeff=0.9997;MQ=89.48;MQ0=0;MQRankSum=-4.274;QD=33.84;ReadPosRankSum=5.515;VQSLOD=3.1870;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:87.26:0,87,1212	0/0:11,0:11:33.11:0,33,474	0/0:27,0:27:81.21:0,81,1099	0/0:30,0:30:68.45:0,68,903	0/0:22,0:22:57.19:0,57,803	1/1:0,15:15:42.13:520,42,0	1/1:2,29:31:87.27:1078,87,0	0/0:30,0:30:84.27:0,84,1192	1/1:0,25:25:66.21:816,66,0	1/1:2,22:24:43.04:771,43,0	1/1:0,18:18:54.13:652,54,0	1/1:0,38:38:99:1337,108,0	1/1:0,38:38:99:1263,102,0	1/1:0,33:33:99:1227,99,0	1/1:1,40:41:99:1326,108,0	1/1:1,29:30:78.24:966,78,0	0/0:32,0:32:93.25:0,93,1279	1/1:0,27:27:75.24:929,75,0	0/0:22,0:22:63.18:0,63,853	0/0:34,0:34:96.32:0,96,1373	0/0:41,0:41:99:0,123,1730	1/1:0,25:25:66.12:797,66,0	1/1:0,15:15:45.14:557,45,0	1/1:1,35:36:96.30:1189,96,0	1/1:1,13:14:36.11:446,36,0	0/0:33,1:34:65.11:0,65,1331	0/0:27,0:27:81.27:0,81,1161	0/0:8,0:8:24.08:0,24,345
chr10	45325555	.	T	TG	13791.55	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-15.843;DP=728;FS=3.188;HRun=5;HaplotypeScore=66.1168;InbreedingCoeff=0.9997;MQ=84.50;MQ0=0;MQRankSum=-2.745;QD=35.27;ReadPosRankSum=4.868;VQSLOD=4.7373;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,111,1193	0/0:11,0:11:30.07:0,30,322	0/0:28,0:28:57.13:0,57,611	0/0:24,0:24:56.60:0,57,570	0/0:17,0:17:48.12:0,48,515	1/1:0,22:22:63.20:829,63,0	1/1:3,31:34:84.74:1106,85,0	0/0:31,0:31:78.17:0,78,823	1/1:2,10:12:33.11:430,33,0	1/1:3,23:26:66.21:866,66,0	1/1:0,11:11:30.10:395,30,0	1/1:2,38:40:99:1499,114,0	1/1:2,30:32:90.29:1181,90,0	1/1:3,27:30:75.24:978,75,0	1/1:1,23:24:66.21:868,66,0	1/1:2,18:20:54.18:711,54,0	0/0:25,0:25:75.19:0,75,805	1/1:2,42:44:99:1497,114,0	0/0:22,0:22:66.14:0,66,695	0/0:16,0:16:39.10:0,39,418	0/0:61,0:61:99:0,171,1837	1/1:0,17:17:51.17:671,51,0	1/1:2,14:16:39.13:512,39,0	1/1:3,36:39:99:1382,105,0	1/1:1,23:24:66.21:867,66,0	0/0:24,1:25:29.69:0,30,660	0/0:17,0:17:45.07:0,45,466	0/0:22,0:22:66.17:0,66,709
chr10	45327118	.	T	TCA	1066.44	PASS	AB=0.938;AC=21;AF=0.438;AN=48;BaseQRankSum=-4.579;DP=657;FS=1.656;HRun=0;HaplotypeScore=166.5685;InbreedingCoeff=0.3356;MQ=59.63;MQ0=14;MQRankSum=1.425;QD=3.33;ReadPosRankSum=-2.832;VQSLOD=2.6161;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:36:8.52:0,9,42	0/0:9,0:12:2.84:0,3,14	./.	./.	1/1:26,0:25:4.56:45,5,0	0/0:14,0:14:2.99:0,3,25	0/0:26,0:26:10.39:0,10,69	1/1:31,0:31:5.73:35,6,0	0/0:26,0:26:8.91:0,9,39	0/1:17,0:17:3.85:35,0,4	1/1:11,0:11:5.86:67,6,0	0/1:27,0:27:2.61:37,0,3	0/1:23,0:22:5.97:6,0,28	0/0:29,0:29:1.91:0,2,47	0/0:33,0:33:23.62:0,24,187	0/0:18,0:18:3.97:0,4,21	0/1:32,21:60:74.19:277,0,74	0/0:21,0:20:4.43:0,4,23	1/1:8,0:8:5.23:44,5,0	1/1:17,0:18:19.58:170,20,0	1/1:47,0:46:28.15:264,28,0	0/0:17,0:17:2.13:0,2,5	./.	0/0:31,0:31:2.84:0,3,14	./.	0/1:19,0:20:28.20:28,0,40	1/1:6,0:17:3.43:27,3,0	1/1:13,0:15:22.05:186,22,0
chr10	45327133	.	CACACACACACACACACACACACACACAT	C	4008.70	PASS	AB=0.972;AC=10;AF=0.179;AN=56;BaseQRankSum=6.878;DP=654;FS=10.131;HRun=0;HaplotypeScore=393.9069;InbreedingCoeff=0.3416;MQ=47.93;MQ0=23;MQRankSum=-5.099;QD=30.14;ReadPosRankSum=6.030;VQSLOD=0.4033;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:52:81.26:0,81,5962	0/0:7,0:7:12.04:0,12,431	0/0:19,0:6:3.01:0,3,45	0/0:17,0:10:15.52:0,16,361	0/0:26,0:24:21.07:0,21,1751	0/0:13,0:13:22.14:0,22,866	0/0:24,0:24:34.93:0,35,1478	0/0:27,0:27:57.13:0,57,2488	0/1:20,1:21:22.09:877,0,22	0/0:19,0:18:52.99:0,53,2276	0/0:15,0:15:14.57:0,15,619	1/1:19,0:19:1.54:628,2,0	0/1:23,0:21:16.58:818,0,17	1/1:21,2:23:23.84:1120,24,0	0/0:36,0:36:60.07:0,60,2180	0/0:22,0:22:54.15:0,54,1957	0/0:52,0:52:74.25:0,74,5902	0/0:24,0:23:48.16:0,48,2054	0/0:9,0:9:24.08:0,24,1258	0/0:20,0:20:21.96:0,22,2313	0/0:61,0:58:99:0,105,7729	0/1:13,1:14:15.95:362,0,16	0/1:11,0:11:11.01:11,0,38	1/1:22,0:22:1:193,1,0	0/0:12,0:12:15.05:0,15,699	0/0:31,0:30:81.27:0,81,5231	0/0:18,0:18:18.87:0,19,886	0/0:16,0:16:34.67:0,35,3365
chr10	45327135	.	CACACACACACACACACACACACACAT	C	5289.40	PASS	AC=14;AF=0.259;AN=54;BaseQRankSum=5.424;DP=664;FS=12.903;HRun=0;HaplotypeScore=370.9837;InbreedingCoeff=0.9156;MQ=47.50;MQ0=26;MQRankSum=-5.511;QD=41.00;ReadPosRankSum=4.771;VQSLOD=2.0947;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:52:81.26:0,81,5531	0/0:8,0:8:12.04:0,12,391	./.	0/0:19,0:9:9.50:0,10,228	0/0:26,0:24:21.07:0,21,1628	0/0:14,0:14:24.30:0,24,746	0/0:26,0:26:36.99:0,37,1310	0/0:27,0:27:59.48:0,59,2227	1/1:16,4:20:16.66:1018,17,0	0/0:20,0:19:55.73:0,56,1925	0/0:15,0:15:14.61:0,15,508	1/1:11,8:19:18.06:925,18,0	1/1:16,6:20:21.07:1163,21,0	1/1:12,11:23:23.84:1410,24,0	0/0:37,0:37:57.59:0,58,1831	0/0:22,0:22:53.97:0,54,1499	0/0:53,0:53:73.64:0,74,5444	0/0:24,0:23:48.16:0,48,1620	0/0:10,0:10:27.09:0,27,1260	0/0:21,0:21:21.96:0,22,2154	0/0:60,0:57:99:0,105,7087	1/1:9,4:13:6.02:382,6,0	1/1:7,3:10:2.97:20,3,0	1/1:18,4:22:14.97:371,15,0	0/0:14,0:14:21.07:0,21,714	0/0:31,0:30:75.21:0,75,4597	0/0:18,0:18:15.71:0,16,732	0/0:16,0:16:34.36:0,34,3142
chr10	45327147	.	CACACACACACACAT	C	6232.79	PASS	AB=0.980;AC=30;AF=0.536;AN=56;BaseQRankSum=2.856;DP=702;FS=1.353;HRun=0;HaplotypeScore=255.5625;InbreedingCoeff=0.7947;MQ=46.97;MQ0=36;MQRankSum=0.135;QD=19.98;ReadPosRankSum=-2.621;VQSLOD=3.5458;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:44:63.14:0,63,2255	1/1:6,0:6:6.02:131,6,0	0/0:24,0:1:2.90:0,3,16	0/0:40,0:9:17.50:0,18,112	0/0:26,0:24:24.02:0,24,764	1/1:17,0:17:21.34:194,21,0	1/1:24,5:29:38.78:512,39,0	0/0:31,0:30:80.52:0,81,908	1/1:11,0:11:18.05:529,18,0	0/1:23,0:22:31.15:291,0,31	1/1:17,0:17:15.39:181,15,0	1/1:22,0:22:25.18:425,25,0	1/1:17,0:15:30.26:601,30,0	1/1:25,0:25:39.57:758,40,0	1/1:32,2:34:48.97:670,49,0	1/1:20,3:23:38.99:705,39,0	0/0:53,0:53:70.02:0,70,2687	0/1:23,1:23:28.40:386,0,28	0/0:14,0:14:29.70:0,30,560	0/0:21,0:21:24.14:0,24,1156	0/0:70,0:67:99:0,108,3026	1/1:12,0:12:15.01:268,15,0	1/1:10,0:10:11.97:96,12,0	1/1:27,0:27:23.23:259,23,0	1/1:14,1:15:23.56:226,24,0	0/0:30,0:29:32.06:0,32,1645	0/0:15,0:15:7.72:0,8,205	0/0:20,0:20:48.49:0,48,1800
chr10	45327149	.	CACACACACACAT	C	5413.34	PASS	AB=1.000;AC=31;AF=0.554;AN=56;BaseQRankSum=2.934;DP=702;FS=0.416;HRun=0;HaplotypeScore=240.9892;InbreedingCoeff=0.8483;MQ=46.93;MQ0=37;MQRankSum=0.102;QD=17.35;ReadPosRankSum=-2.611;VQSLOD=3.4200;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:44:69:0,69,1797	1/1:6,0:6:1.91:65,2,0	0/0:26,0:1:2.90:0,3,16	0/0:39,0:9:17.50:0,18,112	0/0:26,0:24:21.02:0,21,611	1/1:16,0:16:21.71:163,22,0	1/1:29,0:29:21.50:348,21,0	0/0:32,0:31:70.23:0,70,684	1/1:12,0:12:21.04:484,21,0	1/1:20,2:21:35.34:517,35,0	1/1:15,2:17:15.44:271,15,0	1/1:23,0:23:27.38:392,27,0	1/1:18,0:16:32.77:552,33,0	1/1:25,0:25:38.69:673,39,0	1/1:32,0:32:11:438,11,0	1/1:22,0:22:38.96:471,39,0	0/0:52,0:52:68.67:0,69,2357	0/1:25,0:24:12.94:240,0,13	0/0:13,0:13:29.04:0,29,483	0/0:21,0:21:24.14:0,24,961	0/0:72,0:69:99:0,109,2529	1/1:12,0:12:15.01:241,15,0	1/1:9,0:9:11.94:96,12,0	1/1:28,0:28:23.11:245,23,0	1/1:16,0:16:26.70:218,27,0	0/0:28,0:27:47.51:0,48,1358	0/0:15,0:15:6.93:0,7,179	0/0:20,0:20:48.49:0,48,1536
chr10	45327220	.	TA	T	7967.23	PASS	AB=0.783;AC=50;AF=0.893;AN=56;BaseQRankSum=5.643;DP=719;FS=11.829;HRun=12;HaplotypeScore=135.0775;InbreedingCoeff=0.7590;MQ=64.38;MQ0=3;MQRankSum=-2.680;QD=11.93;ReadPosRankSum=2.135;VQSLOD=3.1116;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,0:60:83.87:277,84,0	1/1:1,0:15:26.48:76,26,0	0/1:17,0:15:1.31:1,0,165	0/0:11,0:10:10.12:0,10,133	0/1:3,0:13:1.37:35,0,1	1/1:4,13:18:40.84:308,41,0	1/1:3,21:26:61.73:464,62,0	1/1:10,26:38:75.75:564,76,0	1/1:3,14:18:43.85:331,44,0	1/1:4,22:28:61.70:459,62,0	1/1:1,10:13:30.95:221,31,0	1/1:10,24:35:48.53:554,49,0	1/1:7,18:27:26.84:353,27,0	1/1:8,17:25:56.73:436,57,0	1/1:6,26:33:76.41:585,76,0	1/1:7,12:19:32.80:255,33,0	0/0:37,1:40:52.45:0,52,843	1/1:4,25:31:63.81:476,64,0	1/1:3,1:13:20.52:73,21,0	1/1:2,0:18:26.93:77,27,0	1/1:7,0:54:74.95:216,75,0	1/1:8,16:25:55.78:422,56,0	1/1:6,10:16:34.95:251,35,0	1/1:6,28:34:56.11:440,56,0	1/1:4,26:30:43.36:509,43,0	1/1:5,21:27:58.75:447,59,0	1/1:0,0:19:30.56:88,31,0	1/1:2,0:12:16.29:47,16,0
chr10	45327285	.	CA	C	6810.98	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=6.998;DP=764;FS=12.384;HRun=1;HaplotypeScore=104.2402;InbreedingCoeff=0.9992;MQ=76.61;MQ0=2;MQRankSum=-4.684;QD=36.62;ReadPosRankSum=4.278;VQSLOD=3.8700;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:77,0:77:99:0,208,3165	0/0:17,0:17:48.16:0,48,766	0/0:19,0:19:34.40:0,34,659	0/0:16,0:16:45.08:0,45,649	0/0:12,0:12:30.10:0,30,480	0/0:24,0:24:69.19:0,69,1075	0/0:22,0:22:60.18:0,60,927	0/0:26,0:26:78.27:0,78,1248	1/1:0,20:20:57.19:795,57,0	0/0:34,0:34:99:0,99,1545	0/0:11,0:11:24.07:0,24,358	1/1:1,40:41:99:1464,105,0	1/1:0,26:26:74.85:1045,75,0	1/1:0,37:37:99:1421,102,0	0/0:31,0:31:81.28:0,81,1295	0/0:20,0:20:57.19:0,57,911	0/0:51,0:51:99:0,154,2423	0/0:30,0:29:81.28:0,81,1290	0/0:16,0:16:42.12:0,42,629	0/0:13,0:13:39.10:0,39,594	0/0:66,0:65:99:0,190,2948	1/1:0,24:24:54.18:754,54,0	1/1:0,10:10:27.09:370,27,0	1/1:1,27:28:69.23:962,69,0	0/0:19,0:19:45.15:0,45,709	0/0:35,0:35:93.32:0,93,1480	0/0:26,0:25:69.20:0,69,1053	0/0:13,0:13:33.11:0,33,518
chr10	45327712	.	TTCC	T	16010.38	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=16.190;DP=682;FS=3.756;HRun=0;HaplotypeScore=122.9131;InbreedingCoeff=0.9944;MQ=87.45;MQ0=0;MQRankSum=-5.160;QD=43.86;ReadPosRankSum=2.693;VQSLOD=6.6934;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,105,2435	0/0:7,0:7:21.07:0,21,485	0/0:22,0:22:42.59:0,43,1321	0/0:31,0:31:87.18:0,87,1895	0/0:21,0:21:63.22:0,63,1469	1/1:1,17:18:45.15:794,45,0	1/1:1,27:28:81.28:1425,81,0	0/0:25,0:25:69.24:0,69,1618	1/1:1,23:24:57.19:992,57,0	1/1:1,29:30:78.27:1346,78,0	1/1:1,12:13:33.02:485,33,0	1/1:1,35:36:84.29:1474,84,0	1/1:2,18:20:48.16:844,48,0	1/1:2,30:32:87.30:1535,87,0	1/1:0,32:32:93.32:1633,93,0	1/1:1,23:24:57.20:1001,57,0	0/0:30,0:30:90.31:0,90,2122	1/1:1,19:20:39.13:688,39,0	0/0:13,0:13:39.13:0,39,899	0/0:19,0:19:57.20:0,57,1296	0/0:45,0:45:99:0,132,3051	1/1:4,28:32:84.20:1416,84,0	1/1:1,15:16:42.14:741,42,0	1/1:1,18:19:45.62:777,46,0	1/1:2,19:21:51.13:860,51,0	0/0:27,2:29:11.38:0,11,1792	0/0:29,0:29:87.30:0,87,2052	0/0:10,0:10:30.10:0,30,709
chr10	45329370	.	CAAA	C	2970.33	PASS	AB=0.923;AC=31;AF=0.554;AN=56;BaseQRankSum=-0.522;DP=645;FS=3.976;HRun=17;HaplotypeScore=131.7740;InbreedingCoeff=0.8666;MQ=70.13;MQ0=4;MQRankSum=-5.001;QD=8.81;ReadPosRankSum=7.173;VQSLOD=-0.2326;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,2:44:19.96:0,20,216	0/0:5,1:7:11.53:0,12,120	0/0:29,0:21:4.56:0,5,231	0/0:19,0:13:10.54:0,11,101	1/1:8,10:21:8.72:118,9,0	0/1:19,2:23:9.27:9,0,545	0/0:13,0:27:33.01:0,33,420	1/1:10,12:24:33.77:336,34,0	1/1:8,9:18:20.66:215,21,0	0/0:26,0:39:78.09:0,78,1001	0/0:15,0:16:36.06:0,36,494	1/1:5,12:17:20.90:215,21,0	1/1:8,6:14:12.11:143,12,0	1/1:12,11:23:11.25:122,11,0	0/0:7,0:24:30.01:0,30,358	0/0:7,0:18:21.01:0,21,260	0/0:32,0:37:99:0,99,1337	0/0:13,0:17:38.21:0,38,448	1/1:9,7:19:31.37:309,31,0	1/1:3,7:11:10.76:108,11,0	1/1:19,17:36:21.54:216,22,0	1/1:10,6:18:10.30:120,10,0	1/1:5,12:19:17.34:171,17,0	1/1:17,13:38:42.67:412,43,0	0/0:24,1:28:51.13:0,51,696	1/1:10,11:25:18.02:293,18,0	1/1:10,10:22:29.49:281,29,0	1/1:3,4:7:11.96:122,12,0
chr10	45329575	.	TGAAG	T	21477.61	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=7.300;DP=905;FS=4.068;HRun=0;HaplotypeScore=182.3649;InbreedingCoeff=0.9997;MQ=92.13;MQ0=0;MQRankSum=-8.998;QD=45.03;ReadPosRankSum=5.844;VQSLOD=5.3251;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,129,3385	0/0:12,0:12:36.08:0,36,813	0/0:46,0:46:99:0,138,3035	0/0:42,0:43:99:0,113,2442	0/0:32,0:32:92.05:0,92,2316	1/1:1,10:11:27.01:491,27,0	1/1:2,40:42:90.24:1738,90,0	0/0:29,0:29:87.27:0,87,2069	1/1:0,21:21:45.09:853,45,0	1/1:0,51:51:99:2702,150,0	1/1:0,19:19:36.12:709,36,0	1/1:0,36:36:96.26:1869,96,0	1/1:1,27:28:69.24:1365,69,0	1/1:0,39:39:87.30:1726,87,0	1/1:0,49:49:99:2304,120,0	1/1:0,37:37:93.32:1847,93,0	0/0:33,0:33:93.23:0,93,2164	1/1:1,19:20:42.11:790,42,0	0/0:16,0:16:48.15:0,48,1196	0/0:32,0:32:93.29:0,93,2452	0/0:47,0:47:99:0,138,3671	1/1:3,38:41:90.31:1766,90,0	1/1:0,17:17:36.12:700,36,0	1/1:0,46:46:87.08:1683,87,0	1/1:1,19:20:48.16:933,48,0	0/0:55,2:57:99:0,106,4181	0/0:25,0:25:75.24:0,75,2017	0/0:9,0:9:27.09:0,27,755
chr10	45333485	.	TC	T	7805.78	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=9.055;DP=710;FS=25.201;HRun=2;HaplotypeScore=94.0101;InbreedingCoeff=0.9970;MQ=83.73;MQ0=0;MQRankSum=-1.351;QD=37.35;ReadPosRankSum=1.360;VQSLOD=2.8544;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,154,2269	0/0:7,0:7:21.07:0,21,315	0/0:23,0:23:66.21:0,66,953	0/0:20,0:20:20.15:0,20,739	0/0:16,0:16:45.15:0,45,674	1/1:0,20:20:57.19:740,57,0	1/1:0,22:22:66.21:857,66,0	0/0:27,0:26:78.26:0,78,1169	0/0:26,0:26:78.25:0,78,1148	1/1:1,28:29:84.27:1089,84,0	1/1:0,19:19:57.18:736,57,0	0/0:37,0:37:97.83:0,98,1563	0/0:30,0:30:90.30:0,90,1345	0/0:38,0:38:99:0,114,1707	1/1:0,42:42:99:1636,126,0	1/1:1,26:27:72.23:935,72,0	0/0:31,0:31:90.30:0,90,1345	1/1:0,24:24:66.18:839,66,0	0/0:26,0:26:75.25:0,75,1120	0/0:14,0:14:42.13:0,42,597	0/0:39,0:39:99:0,117,1712	0/0:8,0:8:20.66:0,21,310	0/0:10,0:10:30.10:0,30,447	0/0:34,0:34:99:0,102,1502	1/1:0,26:26:75.24:974,75,0	0/0:20,0:20:60.20:0,60,898	0/0:36,0:36:99:0,108,1616	0/0:7,0:7:21.07:0,21,312
chr10	45334243	.	T	TC	2849.66	PASS	AB=0.571;AC=14;AF=0.250;AN=56;BaseQRankSum=5.542;DP=602;FS=0.000;HRun=6;HaplotypeScore=121.0747;InbreedingCoeff=0.8678;MQ=85.83;MQ0=0;MQRankSum=-4.405;QD=19.25;ReadPosRankSum=-1.456;VQSLOD=2.0043;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:66.13:0,66,672	0/0:11,0:11:33.07:0,33,337	0/0:26,0:26:30.87:0,31,460	0/0:18,0:19:36.84:0,37,409	0/0:19,0:19:45.09:0,45,459	1/1:6,8:14:27.97:332,28,0	1/1:4,19:23:45.61:550,46,0	0/0:31,0:31:66.13:0,66,669	0/0:16,0:16:42.09:0,42,428	1/1:4,11:15:22.64:377,23,0	1/1:3,6:9:13.57:179,14,0	0/0:38,0:38:96.17:0,96,964	0/0:23,0:23:63.13:0,63,641	0/0:30,0:30:75.13:0,75,751	0/1:3,10:13:6.39:259,0,6	1/1:3,18:21:36.11:439,36,0	0/0:37,0:37:99:0,102,1033	0/1:8,22:30:0.32:378,0,0	0/0:17,0:17:45.10:0,45,459	0/0:7,0:7:15.01:0,15,145	0/0:28,0:28:75.15:0,75,757	0/0:13,0:13:36.08:0,36,367	0/0:10,0:10:27.06:0,27,275	0/0:23,0:23:57.12:0,57,581	1/1:12,11:23:36.45:526,36,0	0/0:30,0:30:78.16:0,78,788	0/0:31,0:30:75.12:0,75,754	0/0:13,0:13:18.03:0,18,184
chr10	45334420	.	GGGAAACCACATA	G	14060.84	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=16.510;DP=720;FS=3.142;HRun=0;HaplotypeScore=266.8535;InbreedingCoeff=0.9967;MQ=82.87;MQ0=1;MQRankSum=-16.783;QD=70.66;ReadPosRankSum=3.198;VQSLOD=4.6105;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,141,7933	0/0:10,0:10:24.08:0,24,1477	0/0:25,0:25:75.25:0,75,3584	0/0:27,0:27:69.24:0,69,3790	0/0:13,0:13:39.13:0,39,2412	1/1:5,17:22:36.12:1366,36,0	1/1:7,37:44:81.27:3071,81,0	0/0:24,0:24:66.23:0,66,3657	0/0:20,0:19:54.19:0,54,3350	1/1:5,20:25:57.14:1975,57,0	1/1:1,11:12:15.05:569,15,0	0/0:33,0:33:96.33:0,96,5626	0/0:33,0:33:96.33:0,96,5749	0/0:36,0:36:99:0,108,6448	1/1:2,19:21:48.16:1806,48,0	1/1:5,21:26:48.16:1814,48,0	0/0:42,0:42:99:0,126,7072	1/1:8,14:22:39.13:1482,39,0	0/0:26,0:26:72.25:0,72,3943	0/0:12,0:12:36.12:0,36,2225	0/0:68,0:68:99:0,205,11799	0/0:11,0:11:30.10:0,30,1859	0/0:11,0:11:27.09:0,27,1636	0/0:23,0:23:69.24:0,69,4035	1/1:0,27:27:54.19:1978,54,0	0/0:22,0:22:66.23:0,66,3635	0/0:23,0:23:66.23:0,66,3920	0/0:15,0:15:45.15:0,45,2774
chr10	45337526	.	ATCAG	A	418.37	PASS	AB=0.550;AC=1;AF=0.019;AN=54;BaseQRankSum=4.066;DP=526;FS=3.053;HRun=0;HaplotypeScore=119.7341;InbreedingCoeff=-0.0279;MQ=53.16;MQ0=46;MQRankSum=-5.036;QD=38.03;ReadPosRankSum=-0.589;VQSLOD=3.8751;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:90.31:0,90,2465	0/0:6,0:5:15.05:0,15,410	0/0:23,0:6:12:0,12,163	0/0:19,0:5:9.01:0,9,89	0/0:16,0:15:45.15:0,45,1223	0/0:21,0:19:54.19:0,54,1470	0/0:22,0:18:48.15:0,48,1229	./.	0/0:26,0:20:39.11:0,39,953	0/0:21,0:19:51.10:0,51,1321	0/0:10,0:9:12.01:0,12,265	0/0:21,0:21:38.74:0,39,1010	0/0:22,0:22:47.86:0,48,1245	0/0:27,0:24:47.68:0,48,1314	0/0:29,0:28:72.25:0,72,1949	0/0:28,0:28:72.23:0,72,1862	0/0:19,0:19:51.16:0,51,1338	0/0:28,0:28:68.43:0,68,1828	0/0:3,0:2:6.02:0,6,164	0/0:14,0:13:39.13:0,39,1056	0/0:17,0:17:45.14:0,45,1161	0/0:17,0:15:42.12:0,42,1027	0/0:11,0:9:27.09:0,27,727	0/0:24,0:20:27.09:0,27,707	0/0:25,0:24:60.21:0,60,1605	0/1:2,9:11:52.08:493,0,52	0/0:15,0:15:42.14:0,42,1093	0/0:10,0:10:27.09:0,27,738
chr10	45337566	.	ATCAG	A	301.30	PASS	AC=4;AF=0.087;AN=46;BaseQRankSum=3.802;DP=456;FS=12.825;HRun=0;HaplotypeScore=74.9717;InbreedingCoeff=0.6580;MQ=43.08;MQ0=69;MQRankSum=-4.601;QD=33.48;ReadPosRankSum=-0.949;VQSLOD=2.3318;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:21:45.15:0,45,1210	0/0:10,0:7:13.21:0,13,319	./.	./.	0/0:9,0:5:15.02:0,15,296	0/0:23,0:14:36.12:0,36,915	0/0:16,0:6:15.05:0,15,400	1/1:0,4:3:9.03:174,9,0	0/0:27,0:14:9.03:0,9,232	0/0:13,0:8:21.07:0,21,575	0/0:6,0:4:3.01:0,3,82	0/0:41,0:30:16.10:0,16,354	0/0:27,0:18:14.47:0,14,392	0/0:34,0:23:13.05:0,13,236	0/0:17,0:14:36.12:0,36,986	0/0:17,0:15:30.10:0,30,804	0/0:12,0:12:27.07:0,27,670	0/0:22,0:20:41.31:0,41,1020	./.	./.	0/0:5,0:5:9.03:0,9,245	0/0:17,0:11:9.03:0,9,235	0/0:14,0:6:10.28:0,10,171	0/0:56,0:42:9.03:0,9,246	0/0:21,0:16:30.10:0,30,804	0/0:1,0:1:3.01:0,3,82	./.	1/1:1,4:5:12.04:232,12,0
chr10	45337748	.	T	TC	3465.42	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=8.350;DP=757;FS=13.149;HRun=1;HaplotypeScore=134.4287;InbreedingCoeff=0.5366;MQ=81.86;MQ0=0;MQRankSum=-2.317;QD=22.80;ReadPosRankSum=-4.387;VQSLOD=1.5797;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,43:45:99:1700,120,0	0/0:12,0:12:33.11:0,33,425	0/0:26,0:26:54.93:0,55,684	0/0:28,0:28:72.64:0,73,755	0/0:14,0:14:39.05:0,39,470	0/0:26,0:25:69.22:0,69,879	0/0:37,0:37:99:0,99,1192	1/1:5,17:22:57.05:615,57,0	0/0:26,0:26:4.10:0,4,190	0/0:25,0:25:72.15:0,72,861	0/0:14,0:14:41.96:0,42,507	0/0:27,0:27:57.54:0,58,300	0/0:31,0:31:50.39:0,50,365	0/0:32,0:32:38.78:0,39,314	0/0:24,0:24:69.11:0,69,840	0/0:34,0:34:99:0,99,1280	0/0:35,0:35:96.24:0,96,1208	0/0:36,0:36:93.10:0,93,1128	0/1:9,0:9:28.84:29,0,52	0/1:23,0:23:23.97:24,0,131	0/0:57,0:56:43.15:0,43,364	0/1:25,0:25:19.97:20,0,133	0/0:28,0:28:33.11:0,33,191	0/0:37,0:37:44.72:0,45,278	0/0:14,0:14:42.10:0,42,522	1/1:5,23:27:81.16:1077,81,0	0/0:22,0:22:24.04:0,24,176	0/0:20,0:20:0.82:0,1,157
chr10	45337749	.	C	CCT	3024.75	PASS	AB=1.000;AC=8;AF=0.143;AN=56;BaseQRankSum=9.659;DP=748;FS=17.459;HRun=0;HaplotypeScore=149.7761;InbreedingCoeff=0.7369;MQ=81.64;MQ0=0;MQRankSum=-0.853;QD=24.01;ReadPosRankSum=-3.155;VQSLOD=2.1761;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:46,0:46:99:1398,114,0	0/0:12,0:12:33.11:0,33,538	0/0:25,0:25:63.20:0,63,968	0/0:27,0:27:66.24:0,66,1033	0/0:14,0:14:39.12:0,39,610	0/0:26,0:25:69.24:0,69,1121	0/0:36,0:36:99:0,99,1567	1/1:18,3:21:48.16:787,48,0	0/0:27,0:27:51.85:0,52,555	0/0:24,0:24:72.25:0,72,1163	0/0:14,0:14:42.14:0,42,672	0/0:27,0:27:69.43:0,69,679	0/0:31,0:31:65.98:0,66,844	0/0:32,0:32:77.66:0,78,775	0/0:23,0:23:69.24:0,69,1108	0/0:33,0:33:99:0,99,1613	0/0:35,0:35:96.33:0,96,1556	0/0:34,0:34:93.31:0,93,1483	0/1:9,0:9:5.76:6,0,164	0/1:24,0:24:12.96:13,0,416	0/0:58,0:57:99:0,119,1231	0/0:25,0:25:17.90:0,18,501	0/0:28,0:28:60.51:0,61,600	0/0:36,0:36:87.57:0,88,780	0/0:14,0:14:42.14:0,42,677	1/1:23,3:26:78.23:972,78,0	0/0:21,0:21:52.18:0,52,510	0/0:20,0:20:46.09:0,46,501
chr10	45338034	.	G	GA	11829.60	PASS	AB=0.906;AC=33;AF=0.589;AN=56;BaseQRankSum=-15.378;DP=702;FS=12.998;HRun=6;HaplotypeScore=67.1708;InbreedingCoeff=0.9247;MQ=91.60;MQ0=0;MQRankSum=-2.794;QD=28.64;ReadPosRankSum=2.308;VQSLOD=4.6385;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,138,1380	0/0:6,0:6:18.04:0,18,183	0/0:37,0:38:74.15:0,74,843	0/0:21,0:21:52.64:0,53,515	1/1:1,11:12:33.06:397,33,0	1/1:2,10:12:24.08:302,24,0	1/1:1,33:34:87.28:1094,87,0	0/0:26,0:26:69.15:0,69,704	1/1:2,23:25:60.15:737,60,0	1/1:5,23:28:72.21:879,72,0	1/1:2,10:12:30.05:352,30,0	1/1:1,27:28:81.26:1019,81,0	1/1:4,18:22:57.18:713,57,0	1/1:4,30:34:78.24:968,78,0	1/1:4,32:36:90.22:1112,90,0	1/1:4,26:30:69.22:867,69,0	0/0:25,0:25:69.13:0,69,690	1/1:2,21:23:57.18:717,57,0	0/0:17,0:17:42.03:0,42,403	0/0:22,0:22:63.13:0,63,636	0/0:50,0:50:99:0,129,1306	1/1:2,25:27:66.21:830,66,0	1/1:4,14:18:36.12:453,36,0	1/1:2,21:23:57.18:717,57,0	1/1:1,19:20:51.16:641,51,0	0/1:26,3:29:29.14:29,0,665	0/0:24,0:24:63.14:0,63,641	0/0:12,0:12:36.08:0,36,367
chr10	45343257	.	CA	C	481	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.496;DP=971;FS=0.000;HRun=4;HaplotypeScore=90.3359;InbreedingCoeff=0.9960;MQ=79.86;MQ0=0;MQRankSum=-1.934;QD=26.72;ReadPosRankSum=1.137;VQSLOD=2.5593;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,162,2205	1/1:0,18:18:48.04:576,48,0	0/0:17,0:17:48.15:0,48,641	0/0:30,0:30:74.35:0,74,993	0/0:28,0:28:84.28:0,84,1172	0/0:22,0:22:66.21:0,66,907	0/0:32,0:32:93.28:0,93,1265	0/0:39,0:39:99:0,111,1481	0/0:33,0:33:99:0,99,1364	0/0:40,0:40:99:0,117,1579	0/0:31,0:31:87.29:0,87,1218	0/0:49,0:49:99:0,127,1866	0/0:50,0:50:99:0,147,2035	0/0:42,0:42:99:0,120,1650	0/0:53,0:53:99:0,159,2190	0/0:49,0:49:99:0,141,1942	0/0:37,0:37:99:0,108,1472	0/0:27,0:27:72.20:0,72,970	0/0:32,0:32:93.22:0,93,1199	0/0:37,0:37:99:0,105,1455	0/0:49,0:49:99:0,144,1960	0/0:35,0:35:99:0,102,1410	0/0:17,0:17:45.15:0,45,627	0/0:38,0:38:99:0,108,1495	0/0:24,0:24:72.22:0,72,977	0/0:47,0:47:99:0,132,1849	0/0:34,0:33:96.32:0,96,1343	0/0:7,0:7:21.07:0,21,294
chr10	45344492	.	T	TAA	2629.10	PASS	AC=18;AF=0.563;AN=32;BaseQRankSum=-0.393;DP=243;FS=2.819;HRun=10;HaplotypeScore=59.0026;InbreedingCoeff=0.8958;MQ=60.73;MQ0=4;MQRankSum=-1.099;QD=26.83;ReadPosRankSum=-1.168;VQSLOD=3.3712;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:34:84.14:0,84,852	0/0:0,0:6:13.72:0,14,60	0/0:6,0:7:9.43:0,9,86	0/0:5,0:4:5.98:0,6,61	./.	1/1:2,18:19:39.13:581,39,0	1/1:2,11:14:21.07:313,21,0	0/0:10,0:29:57.60:0,58,249	1/1:3,13:15:30.10:441,30,0	./.	./.	1/1:4,4:7:17.98:219,18,0	1/1:1,15:16:27.09:394,27,0	1/1:3,8:12:35.51:431,36,0	./.	./.	0/0:30,0:30:78.12:0,78,783	./.	./.	./.	./.	1/1:0,4:4:12.04:179,12,0	1/1:2,5:7:12.04:179,12,0	1/1:0,1:1:3.01:45,3,0	./.	0/0:4,0:21:47.73:0,48,222	./.	./.
chr10	45344662	.	CG	C	72.65	PASS	AC=2;AF=0.077;AN=26;BaseQRankSum=2.642;DP=479;FS=8.255;HRun=2;HaplotypeScore=52.2752;InbreedingCoeff=0.9328;MQ=29.97;MQ0=190;MQRankSum=0.719;QD=18.16;ReadPosRankSum=0.719;VQSLOD=3.0238;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:38:59.95:0,60,889	1/1:0,4:4:12.04:155,12,0	./.	./.	./.	0/0:26,0:21:39.13:0,39,577	0/0:21,0:16:26.93:0,27,389	0/0:40,0:22:57.14:0,57,804	0/0:22,0:16:18.06:0,18,269	./.	./.	0/0:33,0:18:27.09:0,27,403	0/0:28,0:19:42.10:0,42,591	0/0:34,0:19:38.98:0,39,528	./.	./.	0/0:48,0:37:45.11:0,45,634	./.	./.	./.	./.	./.	0/0:8,0:8:15.05:0,15,223	0/0:26,0:18:18.02:0,18,245	./.	0/0:30,0:19:57.18:0,57,833	./.	./.
chr10	45346567	.	CG	C	6097.41	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=12.324;DP=791;FS=0.000;HRun=3;HaplotypeScore=80.3025;InbreedingCoeff=1.0000;MQ=86.31;MQ0=0;MQRankSum=-5.268;QD=32.96;ReadPosRankSum=0.415;VQSLOD=5.0343;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,40:43:99:1398,114,0	0/0:28,0:28:78.24:0,78,1096	0/0:26,0:26:72.19:0,72,964	0/0:25,0:25:66.13:0,66,851	0/0:17,0:17:48.13:0,48,651	0/0:20,0:20:56:0,56,782	0/0:32,0:32:93.29:0,93,1297	0/0:27,0:27:78.25:0,78,1091	0/0:24,0:24:69.23:0,69,985	0/0:37,0:37:99:0,108,1498	0/0:15,0:15:45.15:0,45,640	0/0:32,0:32:93.31:0,93,1337	0/0:41,0:41:99:0,120,1688	0/0:26,0:26:75.25:0,75,1078	0/0:44,0:44:99:0,132,1865	0/0:46,0:46:99:0,135,1905	0/0:23,0:23:69.19:0,69,953	0/0:19,0:19:54.18:0,54,775	1/1:0,25:25:75.14:875,75,0	1/1:1,14:15:42.13:520,42,0	1/1:3,53:56:99:1743,141,0	0/0:19,0:19:57.19:0,57,814	0/0:16,0:16:45.15:0,45,648	0/0:35,0:35:99:0,102,1449	0/0:20,0:20:51.15:0,51,714	0/0:34,0:34:96.28:0,96,1314	1/1:0,31:31:84.26:1040,84,0	1/1:0,15:15:42.13:520,42,0
chr10	45347671	.	GC	G	1921.39	PASS	AB=0.517;AC=3;AF=0.054;AN=56;BaseQRankSum=5.911;DP=591;FS=8.522;HRun=1;HaplotypeScore=61.3097;InbreedingCoeff=0.7898;MQ=79.36;MQ0=0;MQRankSum=1.118;QD=36.25;ReadPosRankSum=-2.625;VQSLOD=2.4594;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:69.24:0,69,1099	0/0:13,0:13:39.13:0,39,620	0/0:21,0:21:57.19:0,57,877	0/0:13,0:14:29.78:0,30,423	0/0:33,0:33:99:0,99,1551	0/0:16,0:16:48.10:0,48,733	0/0:19,0:19:57.16:0,57,857	1/1:0,22:22:66.21:906,66,0	0/0:17,0:17:51.16:0,51,792	0/0:28,0:28:81.28:0,81,1287	0/0:24,0:24:72.25:0,72,1147	0/0:27,0:27:81.28:0,81,1283	0/0:25,0:25:75.23:0,75,1167	0/0:12,0:12:36.12:0,36,565	0/0:32,0:32:93.30:0,93,1461	0/0:28,0:28:84.29:0,84,1341	0/0:16,0:16:45.14:0,45,692	0/0:18,0:18:54.16:0,54,837	0/0:14,0:14:39.13:0,39,622	0/0:24,0:24:72.25:0,72,1150	0/0:11,0:11:30.10:0,30,480	0/0:18,0:18:54.17:0,54,838	0/0:22,0:22:66.23:0,66,1055	0/0:20,0:20:51.17:0,51,814	0/0:31,0:31:93.28:0,93,1436	0/1:2,29:31:2.65:1121,0,3	0/0:23,0:23:69.18:0,69,1049	0/0:7,0:7:18.06:0,18,288
chr10	45347805	.	C	CGAGAGAGAGAGA	10345.21	PASS	AB=0.806;AC=50;AF=0.893;AN=56;BaseQRankSum=3.298;DP=726;FS=8.991;HRun=0;HaplotypeScore=303.6947;InbreedingCoeff=0.5137;MQ=62.76;MQ0=5;MQRankSum=-6.187;QD=15.37;ReadPosRankSum=1.563;VQSLOD=2.1688;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:16,26:44:40.20:518,0,40	1/1:17,0:17:24.06:310,24,0	0/0:42,0:29:39.23:0,39,553	0/1:48,0:36:4.39:4,0,472	1/1:25,0:25:5.49:99,5,0	1/1:8,1:20:6.02:212,6,0	1/1:28,0:28:30.06:466,30,0	1/1:41,0:35:63.53:833,64,0	1/1:17,0:17:9.02:143,9,0	1/1:23,0:23:51.10:1090,51,0	1/1:19,0:18:9.49:98,9,0	1/1:21,0:21:7.38:106,7,0	1/1:25,0:25:45.05:516,45,0	1/1:21,0:21:21.38:286,21,0	1/1:31,0:31:14.76:184,15,0	1/1:31,0:31:33.11:929,33,0	0/0:10,0:10:30.08:0,30,748	1/1:29,0:29:62.56:1440,63,0	1/1:20,0:17:33.06:644,33,0	1/1:25,0:25:15.96:200,16,0	1/1:18,0:18:5.62:101,6,0	1/1:18,0:18:12.01:150,12,0	1/1:17,0:17:12.02:169,12,0	1/1:31,0:31:6.06:71,6,0	1/1:35,0:35:8.01:109,8,0	1/1:31,0:31:37.36:659,37,0	1/1:21,0:21:27.08:394,27,0	1/1:17,0:17:42.10:612,42,0
chr10	45350277	.	TG	T	12603.14	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=13.515;DP=735;FS=0.565;HRun=1;HaplotypeScore=71.1514;InbreedingCoeff=0.9923;MQ=67.03;MQ0=0;MQRankSum=4.089;QD=37.62;ReadPosRankSum=6.365;VQSLOD=4.8677;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,123,1930	0/0:23,0:23:69.24:0,69,1102	0/0:32,0:26:78.10:0,78,1124	0/0:36,0:35:85.04:0,85,1458	1/1:0,9:9:24.08:335,24,0	0/0:32,0:32:93.30:0,93,1462	0/0:30,0:30:90.31:0,90,1434	0/0:31,0:31:93.31:0,93,1460	1/1:0,25:25:69.23:965,69,0	1/1:0,17:17:51.16:692,51,0	1/1:0,5:5:12.04:168,12,0	1/1:0,29:29:87.29:1216,87,0	1/1:0,36:36:99:1384,99,0	1/1:0,41:41:99:1551,111,0	1/1:0,31:31:84.28:1175,84,0	1/1:0,24:24:66.22:923,66,0	0/0:41,0:41:99:0,123,1952	1/1:0,40:40:99:1594,114,0	0/0:22,0:19:57.19:0,57,908	0/0:19,0:19:57.19:0,57,909	0/0:33,0:33:96.33:0,96,1532	1/1:0,19:19:45.15:629,45,0	1/1:0,9:9:18.06:251,18,0	1/1:1,27:28:75.25:1049,75,0	1/1:0,22:20:48.16:670,48,0	0/0:19,1:20:15.22:0,15,822	0/0:29,0:29:84.27:0,84,1318	0/0:11,0:11:33.11:0,33,527
chr10	45351765	.	T	TGG	430.42	PASS	AB=0.556;AC=3;AF=0.056;AN=54;BaseQRankSum=7.791;DP=820;FS=16.072;HRun=0;HaplotypeScore=124.4799;InbreedingCoeff=0.6424;MQ=55.47;MQ0=33;MQRankSum=-7.474;QD=15.94;ReadPosRankSum=0.688;VQSLOD=2.7004;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,17:14:31.72:338,32,0	0/0:12,0:12:33.11:0,33,537	0/0:32,0:11:27.09:0,27,440	0/0:37,0:14:39.13:0,39,635	0/0:34,0:34:90.29:0,90,1444	0/0:26,0:26:78.26:0,78,1252	0/0:21,0:21:54.17:0,54,855	./.	0/0:41,0:41:78.08:0,78,1223	0/0:44,0:44:99:0,129,2026	0/0:18,0:18:45.15:0,45,734	0/0:34,0:34:51.17:0,51,825	0/0:49,0:48:84.10:0,84,1311	0/0:34,0:34:60.18:0,60,945	0/0:37,0:37:99:0,108,1755	0/0:39,0:39:99:0,114,1829	0/0:38,0:38:99:0,114,1804	0/0:25,0:25:72.25:0,72,1175	0/0:28,0:26:78.24:0,78,1206	0/0:27,0:27:75.24:0,75,1181	0/0:72,0:72:99:0,208,3305	0/0:19,0:19:24.08:0,24,391	0/0:27,0:26:39.44:0,39,633	0/0:36,0:34:21.07:0,21,343	0/0:23,0:23:57.19:0,57,930	0/1:2,8:10:67.87:198,0,68	0/0:32,0:32:96.33:0,96,1551	0/0:8,0:8:24.08:0,24,388
chr10	45351766	.	AT	A	632.23	PASS	AB=0.556;AC=3;AF=0.056;AN=54;BaseQRankSum=7.972;DP=818;FS=18.150;HRun=1;HaplotypeScore=109.2626;InbreedingCoeff=0.6444;MQ=55.45;MQ0=31;MQRankSum=-7.592;QD=23.42;ReadPosRankSum=-0.118;VQSLOD=2.3354;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,17:14:41.56:462,42,0	0/0:12,0:12:33.11:0,33,523	0/0:32,0:12:36.11:0,36,489	0/0:36,0:14:42.12:0,42,582	0/0:34,0:34:93.30:0,93,1454	0/0:26,0:26:78.20:0,78,1173	0/0:20,0:20:54.18:0,54,818	./.	0/0:40,0:40:75.14:0,75,1197	0/0:44,0:44:99:0,126,1994	0/0:18,0:18:48.03:0,48,757	0/0:34,0:34:53.98:0,54,805	0/0:47,0:46:84.12:0,84,1282	0/0:34,0:34:60.19:0,60,959	0/0:37,0:37:99:0,108,1704	0/0:39,0:39:99:0,114,1823	0/0:37,0:37:99:0,111,1748	0/0:25,0:25:75.26:0,75,1191	0/0:28,0:26:78.24:0,78,1215	0/0:27,0:27:75.26:0,75,1187	0/0:72,0:72:99:0,208,3234	0/0:21,0:21:30.08:0,30,433	0/0:27,0:26:38.52:0,39,620	0/0:36,0:34:21.07:0,21,336	0/0:23,0:23:57.19:0,57,911	0/1:2,8:10:65.88:276,0,66	0/0:32,0:32:96.33:0,96,1534	0/0:10,0:10:30.04:0,30,405
chr10	45351770	.	AGT	A	500.67	PASS	AB=0.556;AC=3;AF=0.056;AN=54;BaseQRankSum=7.423;DP=807;FS=14.451;HRun=0;HaplotypeScore=122.6171;InbreedingCoeff=0.6451;MQ=55.70;MQ0=23;MQRankSum=-7.075;QD=18.54;ReadPosRankSum=-0.229;VQSLOD=3.1600;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,17:14:28.48:356,28,0	0/0:11,0:11:30.09:0,30,573	0/0:30,0:12:36.12:0,36,712	0/0:30,0:14:42.14:0,42,854	0/0:35,0:35:99:0,99,1918	0/0:25,0:25:75.26:0,75,1520	0/0:23,0:23:48.16:0,48,952	./.	0/0:39,0:39:69.10:0,69,1392	0/0:43,0:43:99:0,129,2530	0/0:17,0:17:44.99:0,45,914	0/0:33,0:33:51.07:0,51,1005	0/0:44,0:43:75.08:0,75,1478	0/0:34,0:34:59.98:0,60,1218	0/0:36,0:36:99:0,105,2083	0/0:40,0:40:99:0,120,2438	0/0:35,0:35:99:0,105,2119	0/0:28,0:28:81.23:0,81,1588	0/0:30,0:28:84.29:0,84,1697	0/0:25,0:25:72.25:0,72,1461	0/0:69,0:69:99:0,202,3964	0/0:21,0:21:30.09:0,30,561	0/0:29,0:28:45.42:0,45,864	0/0:39,0:37:30.10:0,30,602	0/0:23,0:23:66.23:0,66,1303	0/1:2,8:10:91.89:250,0,92	0/0:32,0:32:96.33:0,96,1948	0/0:9,0:9:27.09:0,27,549
chr10	45356553	.	TCAGTTCACACTCCAGGGAGGCGCCTTCCC	T	3591.53	PASS	AB=0.682;AC=41;AF=0.759;AN=54;BaseQRankSum=2.544;DP=575;FS=14.532;HRun=0;HaplotypeScore=304.9137;InbreedingCoeff=0.8058;MQ=52.30;MQ0=47;MQRankSum=1.231;QD=8.61;ReadPosRankSum=5.685;VQSLOD=1.0119;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:33:54.02:0,54,628	0/0:9,0:6:11.76:0,12,128	./.	0/0:18,0:1:1.82:0,2,5	1/1:11,0:8:9:94,9,0	1/1:10,0:10:8.99:74,9,0	1/1:29,0:24:29.82:232,30,0	0/0:29,0:22:31.18:0,31,288	1/1:14,0:12:17.96:146,18,0	1/1:11,8:13:18:181,18,0	1/1:14,0:10:5.99:50,6,0	1/1:24,0:19:29.98:255,30,0	1/1:27,0:23:38.95:338,39,0	1/1:30,0:27:50.86:433,51,0	1/1:22,0:19:17.99:153,18,0	1/1:19,0:16:32.99:339,33,0	0/0:30,0:29:58.90:0,59,783	1/1:33,0:27:35.95:324,36,0	1/1:7,5:10:15.03:180,15,0	1/1:6,5:11:5.88:36,6,0	1/1:45,0:33:22.34:197,22,0	1/1:11,13:21:5.80:35,6,0	0/1:8,7:10:0:0,0,0	1/1:24,0:21:14.98:125,15,0	1/1:15,0:13:15.01:150,15,0	0/0:23,0:21:15.09:0,15,436	1/1:16,0:14:23.97:203,24,0	1/1:3,0:3:5.99:48,6,0
chr10	45357344	.	CACACAGAGAGAG	C	2500.80	PASS	AB=0.996;AC=24;AF=0.444;AN=54;BaseQRankSum=0.139;DP=594;FS=49.387;HRun=0;HaplotypeScore=183.8596;InbreedingCoeff=-0.1103;MQ=49.42;MQ0=39;MQRankSum=-3.162;QD=6.27;ReadPosRankSum=0.119;VQSLOD=1.1840;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:19:38.98:66,0,39	./.	0/0:25,0:6:17.65:0,18,217	0/0:24,0:9:21.54:0,22,622	1/1:18,0:15:0.89:2,1,0	1/1:5,14:17:3.01:111,3,0	1/1:2,10:12:3.41:73,3,0	0/1:27,0:27:99:508,0,398	0/1:20,0:19:79.73:80,0,101	0/1:25,0:25:99:279,0,454	0/1:11,0:9:23.54:73,0,24	1/1:36,0:35:17.46:188,17,0	0/1:21,0:19:58.09:121,0,58	0/1:17,0:16:22.65:35,0,23	0/0:23,0:22:3.48:0,3,36	0/1:26,0:26:99:145,0,553	0/0:24,0:22:58.64:0,59,2180	0/0:21,0:18:45.14:0,45,724	0/1:17,0:17:99:180,0,201	0/1:18,0:17:51.53:62,0,52	1/1:35,0:34:1.25:3,1,0	1/1:21,0:19:3.01:35,3,0	0/0:16,0:14:5.77:0,6,88	0/0:32,0:30:9:0,9,206	0/0:10,0:10:5.95:0,6,73	0/1:15,0:14:99:305,0,216	0/1:36,0:35:99:394,0,300	0/0:15,0:10:17.59:0,18,221
chr10	45357346	.	CACAGAGAG	C	3021.31	PASS	AB=0.919;AC=27;AF=0.500;AN=54;BaseQRankSum=0.310;DP=588;FS=54.195;HRun=0;HaplotypeScore=159.1689;InbreedingCoeff=-0.0519;MQ=50.09;MQ0=38;MQRankSum=-3.873;QD=7.44;ReadPosRankSum=1.763;VQSLOD=1.2126;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:19:18.28:47,0,18	./.	0/0:25,0:6:9.01:0,9,127	0/0:23,0:10:24.42:0,24,539	1/1:17,0:14:0.47:1,0,0	1/1:19,0:17:3.01:57,3,0	1/1:12,0:12:2.79:54,3,0	0/1:25,0:25:99:498,0,126	0/1:4,16:19:11.13:286,0,11	0/1:23,0:23:99:187,0,170	1/1:10,0:8:1.36:57,1,0	1/1:8,28:35:28.94:584,29,0	0/1:4,17:19:4.75:285,0,5	1/1:4,14:16:0.97:128,1,0	0/0:24,0:23:2.84:0,3,14	0/1:26,0:26:99:120,0,233	0/0:25,0:23:58.08:0,58,1540	0/0:21,0:18:44.51:0,45,369	0/1:18,0:18:47.97:151,0,48	0/1:18,0:17:22.05:46,0,22	1/1:37,0:36:0.47:1,0,0	1/1:4,18:19:3.01:52,3,0	0/0:4,8:10:5.66:0,6,43	0/0:9,22:29:5.96:0,6,52	0/1:10,0:10:16.54:17,0,21	0/1:15,0:14:86.44:291,0,86	0/1:36,0:35:99:313,0,118	0/0:15,0:10:13.71:0,14,94
chr10	45357348	.	CAGAGAGAGAG	C	3718.15	PASS	AB=0.867;AC=31;AF=0.574;AN=54;BaseQRankSum=-1.493;DP=581;FS=36.223;HRun=0;HaplotypeScore=166.2447;InbreedingCoeff=0.3259;MQ=51.65;MQ0=37;MQRankSum=-5.421;QD=9.30;ReadPosRankSum=0.687;VQSLOD=1.2726;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:16,3:18:2.78:85,0,3	./.	0/0:26,0:7:21.04:0,21,420	0/0:29,0:12:9.74:0,10,1038	1/1:9,0:14:0.89:2,1,0	1/1:19,0:17:3.01:73,3,0	1/1:12,0:12:3.40:55,3,0	1/1:14,6:24:25.95:943,26,0	1/1:20,0:19:11.61:103,12,0	0/1:18,0:21:99:189,0,159	0/1:8,0:8:19.71:49,0,20	1/1:35,0:34:5.55:166,6,0	0/1:20,0:18:8.28:110,0,8	1/1:18,0:16:5.66:46,6,0	0/0:6,0:23:3:0,3,30	0/1:23,0:26:99:103,0,410	0/0:24,0:22:59.01:0,59,2512	0/0:21,0:18:18.82:0,19,470	1/1:9,7:16:6.23:390,6,0	0/1:9,9:18:1.18:84,0,1	1/1:15,22:36:1.36:2,1,0	1/1:22,0:19:2.94:18,3,0	0/1:12,0:10:0:0,0,0	0/0:29,0:27:6.02:0,6,125	0/0:7,0:10:5.55:0,6,64	1/1:11,4:15:6.49:635,6,0	1/1:30,3:34:9.92:665,10,0	0/0:13,1:10:7.68:0,8,26
chr10	45361408	.	GACACACAC	G	2368.55	PASS	AB=0.756;AC=30;AF=0.556;AN=54;BaseQRankSum=5.546;DP=635;FS=8.381;HRun=0;HaplotypeScore=159.5235;InbreedingCoeff=0.5845;MQ=63.37;MQ0=7;MQRankSum=-5.104;QD=7.20;ReadPosRankSum=0.520;VQSLOD=1.9809;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:30,2:33:15.96:211,16,0	1/1:2,4:8:18.06:393,18,0	0/0:43,0:24:0.47:0,0,1	./.	1/1:13,0:15:7.72:83,8,0	0/0:13,0:20:12.51:0,13,301	0/0:15,0:19:6.02:0,6,228	0/0:23,0:23:3.07:0,3,7	1/1:17,4:21:20.60:434,21,0	1/1:15,0:21:9.08:116,9,0	1/1:8,0:13:3.01:56,3,0	0/0:15,0:18:0.47:0,0,1	1/1:10,7:18:15.04:303,15,0	0/1:19,8:27:31.32:191,0,31	1/1:15,0:24:15.48:188,15,0	1/1:9,0:14:3.01:56,3,0	0/0:25,0:25:42.14:0,42,1447	1/1:22,0:24:8.39:119,8,0	0/0:17,0:17:11.99:0,12,268	0/0:14,0:14:12.04:0,12,288	0/0:58,0:57:78.21:0,78,2023	1/1:13,1:14:9.03:145,9,0	1/1:9,12:22:8.55:70,9,0	1/1:25,9:34:2.58:74,3,0	1/1:13,0:19:3.01:56,3,0	0/1:13,0:20:55.29:55,0,131	0/0:12,0:20:12.04:0,12,273	0/0:11,0:11:15.05:0,15,391
chr10	45362661	.	C	CAAAA	14427.38	PASS	AB=0.765;AC=48;AF=0.857;AN=56;BaseQRankSum=-1.101;DP=644;FS=0.995;HRun=11;HaplotypeScore=150.4217;InbreedingCoeff=0.7077;MQ=66.23;MQ0=0;MQRankSum=-4.776;QD=25.05;ReadPosRankSum=-4.761;VQSLOD=1.3527;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,0:24:39.04:466,39,0	1/1:1,0:11:26.97:298,27,0	0/0:16,0:17:7.64:0,8,274	0/1:9,0:8:12.95:13,0,72	1/1:3,19:28:70.77:1293,71,0	0/1:3,0:26:4.57:5,0,31	0/0:6,0:26:21.95:0,22,198	1/1:16,1:32:59.77:695,60,0	1/1:12,9:24:28.91:507,29,0	1/1:10,13:29:62.01:1085,62,0	1/1:6,14:25:59.32:964,59,0	1/1:12,2:25:25.64:447,26,0	1/1:19,0:19:36.11:540,36,0	1/1:12,0:19:11.25:144,11,0	1/1:6,19:28:27.01:543,27,0	1/1:7,7:21:27.01:518,27,0	0/0:25,0:25:63.11:0,63,838	1/1:8,6:17:15.05:315,15,0	1/1:14,3:26:48.02:743,48,0	1/1:12,21:40:90.29:1657,90,0	1/1:8,7:18:12.04:236,12,0	1/1:9,1:21:45.11:737,45,0	1/1:5,2:16:36.55:635,37,0	1/1:10,2:23:15.05:260,15,0	1/1:6,13:24:27.09:476,27,0	1/1:5,1:27:69.13:857,69,0	1/1:10,15:28:15.16:582,15,0	1/1:2,10:14:20.86:414,21,0
chr10	45369692	.	CTGTCTGTCTGTCTGTCTGTCTGTCTG	C	1783.84	PASS	AB=1.000;AC=20;AF=0.400;AN=50;BaseQRankSum=4.449;DP=396;FS=4.156;HRun=0;HaplotypeScore=241.3043;InbreedingCoeff=0.1820;MQ=52.28;MQ0=11;MQRankSum=-2.081;QD=13.51;ReadPosRankSum=-0.779;VQSLOD=2.0051;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:24:24.08:0,24,1440	0/0:8,0:8:15.05:0,15,443	0/0:24,0:17:48.16:0,48,2462	0/0:13,0:11:32.32:0,32,1095	./.	0/0:17,0:16:38.99:0,39,1125	0/0:24,0:24:52.81:0,53,2498	0/0:60,0:55:99:0,156,7977	0/1:11,0:11:26.90:27,0,110	1/1:0,10:10:22.39:435,22,0	./.	0/1:9,0:9:40.07:69,0,40	1/1:4,0:4:3.01:37,3,0	0/1:5,0:5:15.09:45,0,15	1/1:9,0:9:9.02:125,9,0	1/1:10,0:10:6.01:97,6,0	0/0:32,0:32:85.96:0,86,7864	0/1:9,0:9:68.28:285,0,68	0/1:8,0:7:99:221,0,111	1/1:10,0:10:8.96:71,9,0	./.	0/0:7,0:7:3.01:0,3,48	0/0:7,0:7:2.94:0,3,18	0/1:17,0:16:77.44:77,0,163	1/1:11,0:11:3.01:49,3,0	0/0:20,0:19:54.19:0,54,3418	0/1:6,0:6:38.49:49,0,38	0/1:13,0:12:21.50:363,0,21
chr10	45369696	.	CTGTCTGTCTGTCTGTCTGTCTG	C	2137.97	PASS	AB=0.931;AC=24;AF=0.500;AN=48;BaseQRankSum=3.190;DP=386;FS=4.048;HRun=0;HaplotypeScore=204.8162;InbreedingCoeff=0.3306;MQ=49.60;MQ0=13;MQRankSum=-2.364;QD=16.57;ReadPosRankSum=-1.096;VQSLOD=2.6155;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:23:24.07:0,24,1202	0/1:8,0:8:10.73:11,0,273	0/0:22,0:15:44.95:0,45,1911	0/0:12,0:10:29.79:0,30,732	./.	0/0:18,0:17:33.87:0,34,673	0/0:23,0:23:15.63:0,16,1775	0/0:65,0:59:99:0,174,7862	0/1:12,0:12:40.50:46,0,40	1/1:11,0:10:15.91:270,16,0	./.	0/1:9,0:9:15.97:141,0,16	1/1:4,0:4:3.01:55,3,0	1/1:5,0:5:6.01:101,6,0	1/1:7,0:7:5.99:50,6,0	1/1:7,0:7:3.01:55,3,0	0/0:36,0:36:91.98:0,92,7046	0/1:8,0:8:34.31:277,0,34	0/1:2,5:6:69.26:306,0,69	1/1:11,0:10:9.03:145,9,0	./.	0/0:7,0:7:2.99:0,3,24	./.	0/1:13,0:12:46.49:179,0,46	1/1:11,0:11:3:25,3,0	0/0:20,0:19:54.14:0,54,2840	1/1:5,0:5:5.95:94,6,0	1/1:11,0:10:27.03:554,27,0
chr10	45369700	.	CTGTCTGTCTGTCTGTCTG	C	1852.01	PASS	AB=1.000;AC=24;AF=0.545;AN=44;BaseQRankSum=3.773;DP=376;FS=0.667;HRun=0;HaplotypeScore=171.1254;InbreedingCoeff=0.2673;MQ=46.83;MQ0=13;MQRankSum=-1.188;QD=12.18;ReadPosRankSum=-0.707;VQSLOD=2.1564;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:21.05:0,21,974	0/1:9,0:9:61.28:61,0,150	0/0:21,0:14:41.99:0,42,1383	0/0:10,0:8:11.21:0,11,388	./.	0/1:17,0:16:18.59:19,0,228	0/1:22,0:22:8.39:8,0,1107	0/0:66,0:59:99:0,164,5957	1/1:9,0:9:6.01:97,6,0	0/1:12,0:11:5.65:142,0,6	./.	1/1:9,0:8:6.02:214,6,0	0/1:5,0:4:1.95:66,0,2	1/1:6,0:6:6.02:150,6,0	0/1:5,0:5:0:0,0,0	1/1:6,0:6:3.01:37,3,0	0/0:38,0:39:99:0,102,6015	0/1:7,0:7:7.88:238,0,8	0/1:7,0:6:46.32:219,0,46	1/1:11,0:10:8.99:74,9,0	./.	./.	./.	1/1:14,0:13:9.03:273,9,0	./.	0/0:20,0:19:54.05:0,54,2258	1/1:4,0:4:3.01:57,3,0	1/1:9,0:8:18.01:349,18,0
chr10	45369744	.	CTGTGTGTGTG	C	1256.68	PASS	AC=8;AF=0.500;AN=16;BaseQRankSum=4.435;DP=182;FS=3.836;HRun=0;HaplotypeScore=67.8838;MQ=35.21;MQ0=18;MQRankSum=-3.100;QD=17.21;ReadPosRankSum=-0.620;VQSLOD=1.5892;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:15:3.01:55,3,0	./.	0/0:15,0:7:21.07:0,21,925	0/0:17,0:10:24.04:0,24,914	./.	1/1:3,0:3:0.47:1,0,0	./.	1/1:14,22:31:45.61:765,46,0	./.	./.	./.	./.	./.	./.	./.	./.	0/0:30,0:29:69.62:0,70,2405	./.	0/0:6,0:4:2.49:0,2,6	./.	./.	./.	./.	./.	./.	1/1:8,10:17:26.92:532,27,0	./.	./.
chr10	45369884	.	G	GTC	1375.73	PASS	AC=8;AF=0.500;AN=16;BaseQRankSum=4.307;DP=157;FS=3.786;HRun=0;HaplotypeScore=78.6413;MQ=33.33;MQ0=18;MQRankSum=-3.596;QD=16.98;ReadPosRankSum=-2.303;VQSLOD=3.1750;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,7:17:3.48:52,3,0	1/1:1,8:8:11.64:187,12,0	0/0:11,0:2:3.01:0,3,39	0/0:19,0:4:6.01:0,6,75	./.	./.	./.	1/1:17,16:29:57.05:847,57,0	0/0:1,0:1:0.47:0,0,1	./.	./.	./.	./.	./.	./.	./.	0/0:28,0:27:53.99:0,54,699	./.	./.	./.	./.	./.	./.	./.	./.	1/1:6,12:19:10.87:385,11,0	./.	./.
chr10	45369900	.	GTGTC	G	36.27	PASS	AB=0.852;AC=9;AF=0.300;AN=30;BaseQRankSum=-1.274;DP=198;FS=5.269;HRun=0;HaplotypeScore=61.7351;InbreedingCoeff=0.4210;MQ=31.21;MQ0=17;MQRankSum=0.553;QD=1.45;ReadPosRankSum=-1.312;VQSLOD=1.0085;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:19:3.88:0,4,26	0/0:9,0:8:9.98:0,10,120	./.	0/0:11,0:3:5.82:0,6,85	1/1:3,0:1:2.99:24,3,0	0/0:2,0:1:0:0,0,0	./.	0/0:47,0:43:99:0,118,1655	1/1:5,0:5:2.54:17,3,0	0/1:1,0:1:0:0,0,0	./.	0/0:3,0:3:0:0,0,0	./.	0/0:3,0:2:0.89:0,1,2	./.	./.	0/0:30,0:29:45.98:0,46,1105	./.	0/1:1,4:5:6.34:70,0,6	./.	./.	./.	0/1:4,0:4:0:0,0,0	1/1:7,0:4:2.97:20,3,0	./.	0/0:23,0:20:29.61:0,30,610	./.	./.
chr10	45374413	.	G	GTGTGT	1760.33	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=0.375;DP=969;FS=0.735;HRun=0;HaplotypeScore=223.6407;InbreedingCoeff=0.9785;MQ=62.33;MQ0=1;MQRankSum=-3.682;QD=33.21;ReadPosRankSum=-0.779;VQSLOD=3.1054;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,123,2334	1/1:0,8:9:9.03:277,9,0	0/0:46,0:41:99:0,102,1898	0/0:49,0:43:87.24:0,87,1452	0/0:42,0:42:99:0,111,1900	1/1:2,15:19:30.10:919,30,0	1/1:4,21:25:29.97:702,30,0	0/0:45,0:45:99:0,114,2120	0/0:30,0:30:87.29:0,87,1599	0/0:39,0:39:99:0,105,2016	0/0:18,0:18:51.17:0,51,1005	0/0:30,0:30:82.53:0,83,1566	0/0:38,0:38:90.27:0,90,1689	0/0:36,0:36:84.27:0,84,1564	0/0:34,0:34:78.25:0,78,1360	0/0:35,0:35:99:0,99,1840	0/0:38,0:38:99:0,102,2016	0/0:27,0:27:78.24:0,78,1529	0/0:23,0:23:66.23:0,66,1300	0/0:22,0:22:60.21:0,60,1205	0/0:69,0:68:99:0,169,3699	0/0:38,0:38:84.25:0,84,1554	0/0:34,0:34:93.31:0,93,1761	0/0:54,0:54:99:0,122,2420	0/0:31,0:31:81.28:0,81,1568	0/0:39,0:39:99:0,102,2044	0/0:24,0:24:66.21:0,66,1192	0/0:21,0:21:51.17:0,51,1046
chr10	45376018	.	G	GGGA	830.88	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=1.435;DP=416;FS=24.458;HRun=0;HaplotypeScore=72.4179;InbreedingCoeff=0.7120;MQ=72.07;MQ0=1;MQRankSum=-0.537;QD=10.93;ReadPosRankSum=-3.627;VQSLOD=0.8248;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:24:47.83:0,48,404	1/1:6,0:6:2.67:21,3,0	0/0:13,0:13:8.58:0,9,319	0/0:10,0:10:7.96:0,8,156	0/0:9,0:9:17.94:0,18,182	1/1:9,0:7:17.93:171,18,0	1/1:17,0:16:41.97:314,42,0	1/1:1,8:10:26.98:278,27,0	0/1:23,0:22:17.46:17,0,163	0/0:21,0:21:56.99:0,57,577	0/0:6,0:6:17.88:0,18,154	0/0:10,0:9:0.59:0,1,21	0/0:14,0:13:18.42:0,18,163	0/0:22,0:19:25.61:0,26,208	0/0:20,0:20:56.19:0,56,542	0/0:15,0:15:21.02:0,21,279	0/0:20,0:20:53.95:0,54,567	0/0:23,0:23:46.56:0,47,540	0/0:18,0:17:22.14:0,22,344	0/0:6,0:6:17.96:0,18,160	0/0:41,0:40:80.75:0,81,993	0/0:6,0:6:6:0,6,51	0/0:3,0:3:2.99:0,3,24	0/0:10,0:10:20.17:0,20,146	0/0:13,0:13:29.98:0,30,252	1/1:11,0:11:20.99:196,21,0	0/0:18,0:18:29.97:0,30,277	0/0:14,0:14:23.84:0,24,222
chr10	45378513	.	TGG	T	5614.94	PASS	AB=0.687;AC=26;AF=0.464;AN=56;BaseQRankSum=-2.295;DP=654;FS=6.066;HRun=11;HaplotypeScore=96.0656;InbreedingCoeff=0.6971;MQ=67.85;MQ0=18;MQRankSum=1.555;QD=15.68;ReadPosRankSum=7.761;VQSLOD=3.0157;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,30:36:58.52:806,59,0	1/1:1,11:12:33.08:351,33,0	0/0:69,0:29:27.18:0,27,363	0/1:74,0:29:13.80:14,0,202	0/0:10,0:12:20.28:0,20,230	1/1:4,16:20:47.12:508,47,0	1/1:5,21:26:54.10:575,54,0	0/0:12,0:14:21.91:0,22,313	1/1:2,12:14:36.08:383,36,0	0/0:22,0:21:39.13:0,39,597	0/0:12,0:16:6.19:0,6,127	1/1:6,15:19:33.06:351,33,0	1/1:2,15:18:44.84:459,45,0	1/1:4,23:27:60.15:639,60,0	0/0:27,0:28:50.13:0,50,689	0/0:14,0:14:27.09:0,27,410	0/0:25,0:25:46.53:0,47,879	0/0:12,0:16:32.07:0,32,408	0/1:9,2:21:34.52:35,0,53	0/1:4,2:10:21.14:45,0,21	0/1:2,1:12:9.72:10,0,27	1/1:1,16:18:47.85:491,48,0	1/1:2,17:19:47.91:511,48,0	1/1:7,16:23:35.90:438,36,0	0/0:17,0:17:30.10:0,30,451	0/0:15,0:22:21:0,21,227	0/0:6,0:30:39.59:0,40,191	0/0:0,0:6:7.69:0,8,33
chr10	45378523	.	GGT	G	881.76	PASS	AB=0.978;AC=18;AF=0.321;AN=56;BaseQRankSum=5.821;DP=631;FS=5.367;HRun=0;HaplotypeScore=106.8374;InbreedingCoeff=0.3079;MQ=68.34;MQ0=17;MQRankSum=-0.170;QD=2.76;ReadPosRankSum=9.974;VQSLOD=-0.2252;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:36,3:38:67.07:200,0,67	0/1:13,0:13:22.97:42,0,23	0/0:73,0:30:47.41:0,47,559	0/1:83,1:31:26.95:27,0,318	0/0:10,0:10:26.93:0,27,331	0/1:19,1:20:12.08:99,0,12	1/1:21,0:21:37.01:127,37,0	0/0:26,0:25:71.59:0,72,820	0/1:14,0:14:1.49:76,0,1	0/0:20,0:19:48.15:0,48,757	0/0:13,0:13:22.66:0,23,234	0/1:17,0:15:22.12:60,0,22	1/1:17,0:17:4.25:71,4,0	1/1:25,1:26:6.58:104,7,0	0/0:21,0:21:59.46:0,59,897	0/0:14,0:14:39.02:0,39,589	0/0:27,0:27:68.47:0,68,1065	0/0:16,0:16:38.86:0,39,524	0/0:17,0:17:30.93:0,31,243	0/1:11,0:11:4.27:4,0,108	0/0:11,0:11:13.29:0,13,99	1/1:17,0:17:5.26:50,5,0	1/1:18,0:18:13.29:103,13,0	0/1:21,1:22:75.01:93,0,75	0/0:14,0:14:39.08:0,39,552	0/0:14,0:14:30.03:0,30,340	0/0:28,0:28:76.93:0,77,463	0/0:7,0:7:1.41:0,1,70
chr10	45381372	.	GT	G	9035.25	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=10.663;DP=595;FS=2.596;HRun=9;HaplotypeScore=62.7519;InbreedingCoeff=0.9441;MQ=70.76;MQ0=3;MQRankSum=1.462;QD=22.93;ReadPosRankSum=2.598;VQSLOD=5.8952;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,33:39:99:959,105,0	1/1:2,16:18:39.02:355,39,0	0/0:30,0:20:2.22:0,2,263	0/0:22,0:10:6.89:0,7,123	1/1:1,25:26:72.03:657,72,0	1/1:3,16:19:39.01:357,39,0	1/1:0,18:18:45.02:412,45,0	1/1:3,13:16:32.44:317,32,0	1/1:1,7:8:21:192,21,0	1/1:2,23:25:69.04:631,69,0	1/1:1,17:18:45.01:409,45,0	1/1:0,14:14:39.02:357,39,0	1/1:1,12:13:30.02:275,30,0	1/1:3,15:18:45.02:412,45,0	1/1:2,22:24:57.03:522,57,0	1/1:1,8:9:24.01:220,24,0	0/0:40,0:40:99:0,111,1246	1/1:2,20:22:54.03:494,54,0	0/0:21,1:21:11.62:0,12,373	0/0:23,0:23:63.19:0,63,727	0/0:13,0:13:36.11:0,36,414	1/1:1,12:13:33.01:301,33,0	1/1:1,25:26:69.02:631,69,0	1/1:2,16:18:42.02:384,42,0	1/1:1,23:24:51.03:467,51,0	1/1:1,25:26:75.03:682,75,0	0/0:31,0:30:81.17:0,81,884	0/0:20,0:20:60.13:0,60,668
chr10	45381459	.	GTTGTT	G	4174.60	PASS	AB=0.964;AC=36;AF=0.667;AN=54;BaseQRankSum=7.486;DP=676;FS=2.542;HRun=0;HaplotypeScore=134.9185;InbreedingCoeff=0.7779;MQ=66.09;MQ0=17;MQRankSum=-2.228;QD=9.42;ReadPosRankSum=1.054;VQSLOD=2.4938;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:49:72.23:0,72,1558	0/0:10,0:10:15.05:0,15,413	./.	0/1:73,0:31:0:0,0,0	1/1:20,0:24:5.98:54,6,0	1/1:12,6:18:27.06:409,27,0	1/1:9,9:18:12:179,12,0	1/1:32,0:29:2.97:20,3,0	0/0:23,0:23:42.11:0,42,982	1/1:22,0:25:11.93:121,12,0	1/1:16,0:23:9.03:105,9,0	0/0:22,0:22:36.09:0,36,907	0/0:21,0:21:18.06:0,18,493	0/0:22,0:22:33.11:0,33,874	1/1:8,0:13:15.04:175,15,0	1/1:7,0:12:18.05:233,18,0	1/1:14,12:26:30.10:531,30,0	1/1:19,0:22:8.99:105,9,0	1/1:13,4:16:12.04:213,12,0	1/1:12,13:26:36.04:554,36,0	1/1:8,6:14:12.04:212,12,0	0/1:12,1:13:26.01:26,0,561	0/0:26,0:26:36.12:0,36,935	0/0:17,0:17:27.09:0,27,721	1/1:9,0:12:6.02:70,6,0	1/1:22,5:27:18.06:319,18,0	1/1:19,13:32:39.13:690,39,0	1/1:11,3:14:9.03:159,9,0
chr10	45382162	.	TTG	T	716.04	PASS	AB=0.854;AC=16;AF=0.296;AN=54;BaseQRankSum=-3.608;DP=433;FS=1.885;HRun=0;HaplotypeScore=79.6801;InbreedingCoeff=0.4470;MQ=55.57;MQ0=9;MQRankSum=0.995;QD=5.15;ReadPosRankSum=-0.377;VQSLOD=2.2856;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:33,0:35:24.32:187,24,0	0/0:10,0:10:12.02:0,12,129	./.	0/0:19,0:7:0:0,0,0	0/0:22,0:21:8:0,8,50	0/1:15,1:17:38.66:39,0,183	0/0:8,0:12:15.01:0,15,144	0/0:27,0:26:10.20:0,10,82	0/1:6,6:12:26.36:116,0,26	0/0:24,0:24:47.85:0,48,387	0/0:15,0:15:11.96:0,12,94	1/1:8,2:9:3.01:33,3,0	1/1:3,7:10:18.05:197,18,0	0/1:5,0:3:18.34:18,0,38	0/0:8,0:8:8.98:0,9,72	0/0:5,0:5:8.86:0,9,64	0/1:19,6:24:35.60:36,0,301	0/0:21,0:22:29.42:0,29,232	0/0:19,0:18:12:0,12,105	0/0:15,0:15:8.99:0,9,74	0/0:9,0:15:8.78:0,9,77	1/1:4,2:6:3.01:33,3,0	1/1:6,3:8:5.91:66,6,0	1/1:3,6:9:13.28:161,13,0	0/0:20,0:20:29.93:0,30,243	0/0:24,0:24:32.76:0,33,257	0/0:8,0:12:17.97:0,18,167	0/0:9,0:12:3:0,3,26
chr10	45382176	.	G	GTGTA	3428.41	PASS	AB=0.850;AC=17;AF=0.304;AN=56;BaseQRankSum=-4.375;DP=448;FS=1.881;HRun=0;HaplotypeScore=84.8796;InbreedingCoeff=0.2392;MQ=52.76;MQ0=11;MQRankSum=2.285;QD=15.73;ReadPosRankSum=6.250;VQSLOD=3.0089;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:40:77.54:0,78,717	0/1:10,0:10:31.42:31,0,58	0/0:10,0:3:8.92:0,9,62	0/0:19,0:7:14.93:0,15,115	0/1:1,20:20:7.97:75,0,8	0/0:17,0:17:33.41:0,33,273	0/0:14,0:13:19.86:0,20,166	0/0:18,0:17:41.72:0,42,327	0/0:12,0:12:21.04:0,21,242	1/1:5,23:29:54.05:1001,54,0	0/1:4,16:21:1.01:187,0,1	0/0:8,0:6:11.95:0,12,104	0/0:10,0:10:26.83:0,27,286	0/0:8,0:6:11.98:0,12,126	1/1:1,9:10:9.03:241,9,0	1/1:0,7:7:9.03:241,9,0	0/0:24,0:23:41.99:0,42,537	0/1:7,15:24:26.63:471,0,27	0/1:15,0:14:45.39:45,0,203	0/0:16,0:15:7.34:0,7,53	0/1:17,0:17:95.75:113,0,96	0/0:8,0:8:6.01:0,6,61	0/0:10,0:9:17.92:0,18,171	0/0:15,0:15:27.04:0,27,302	1/1:3,18:22:32.85:819,33,0	0/1:21,0:21:61.93:62,0,297	0/1:12,0:12:99:117,0,144	0/1:9,0:9:25.67:26,0,123
chr10	45382178	.	G	GTA	1476.04	PASS	AB=0.968;AC=12;AF=0.214;AN=56;BaseQRankSum=3.174;DP=444;FS=1.949;HRun=0;HaplotypeScore=79.1924;InbreedingCoeff=0.3107;MQ=52.67;MQ0=11;MQRankSum=1.323;QD=9.06;ReadPosRankSum=7.734;VQSLOD=2.3920;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:39:74.26:0,74,641	0/0:9,0:9:10.29:0,10,77	0/0:10,0:3:8.92:0,9,63	0/0:20,0:8:14.95:0,15,118	0/1:20,0:20:7.97:28,0,8	0/1:17,0:17:21.42:21,0,201	0/1:14,0:13:48.79:49,0,131	0/0:18,0:17:42.99:0,43,332	0/0:12,0:12:20.83:0,21,188	0/1:28,1:29:8.03:547,0,8	0/1:19,1:20:17.56:115,0,18	0/0:8,0:6:11.94:0,12,92	0/0:10,0:10:26.93:0,27,213	0/0:8,0:6:14.98:0,15,141	1/1:9,0:9:9.03:103,9,0	1/1:7,0:7:9.03:101,9,0	0/0:23,0:22:44.88:0,45,471	0/1:21,3:24:49.70:318,0,50	0/0:15,0:14:34.46:0,34,248	0/0:15,0:14:7.32:0,7,53	0/0:17,0:17:11.95:0,12,114	0/0:8,0:8:5.99:0,6,49	0/0:10,0:9:17.86:0,18,146	0/0:16,0:16:32.94:0,33,277	1/1:22,0:23:32.88:355,33,0	0/0:21,0:21:9.57:0,10,311	0/0:12,0:12:10.65:0,11,150	0/0:9,0:9:16.63:0,17,142
chr10	45382670	.	TA	T	19128.30	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-0.149;DP=677;FS=4.049;HRun=4;HaplotypeScore=68.6714;InbreedingCoeff=0.9941;MQ=70.38;MQ0=0;MQRankSum=-3.940;QD=30.31;ReadPosRankSum=3.580;VQSLOD=5.2301;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,37:37:93.28:1112,93,0	1/1:0,10:10:30.09:358,30,0	0/0:16,0:16:45.12:0,45,578	0/0:13,0:10:15.04:0,15,176	1/1:2,28:30:81.10:920,81,0	1/1:0,18:18:48.15:574,48,0	1/1:3,16:19:48.15:574,48,0	1/1:2,27:29:78.20:900,78,0	1/1:1,25:26:69.21:826,69,0	1/1:6,34:40:99:1250,105,0	1/1:2,23:25:54.12:630,54,0	1/1:1,27:28:69.21:826,69,0	1/1:1,22:23:63.19:754,63,0	1/1:0,28:28:78.24:934,78,0	1/1:1,23:24:66.20:790,66,0	1/1:3,30:33:75.23:898,75,0	0/0:17,0:17:48.16:0,48,662	1/1:0,17:17:45.11:524,45,0	1/1:6,21:27:60.08:647,60,0	1/1:1,26:27:75.23:898,75,0	1/1:2,22:24:57.17:682,57,0	1/1:2,21:23:48.14:574,48,0	1/1:0,19:19:51.16:610,51,0	1/1:2,15:17:45.08:521,45,0	1/1:0,27:27:57.17:682,57,0	1/1:0,35:35:99:1206,105,0	1/1:2,25:27:72.22:861,72,0	1/1:2,16:18:48.15:574,48,0
chr10	45382982	.	ATGTCTGTCTGTC	A	1240.44	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=4.305;DP=888;FS=1.059;HRun=0;HaplotypeScore=306.4053;InbreedingCoeff=0.9610;MQ=63.16;MQ0=3;MQRankSum=-5.381;QD=30.25;ReadPosRankSum=-2.333;VQSLOD=2.0909;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:62,0:62:99:0,157,8431	1/1:2,9:11:12.04:427,12,0	0/0:17,0:8:12.74:0,13,159	0/0:24,0:14:32.89:0,33,933	0/0:24,0:24:41.16:0,41,1771	1/1:3,10:13:15.05:518,15,0	1/1:2,15:17:11.62:427,12,0	0/0:34,0:34:78.24:0,78,3040	0/0:40,0:40:99:0,108,5336	0/0:41,0:41:84.28:0,84,3998	0/0:25,0:25:51.13:0,51,2026	0/0:46,0:46:99:0,120,5716	0/0:39,0:39:99:0,99,5068	0/0:28,0:28:78.24:0,78,3608	0/0:36,0:36:90.28:0,90,4225	0/0:39,0:39:87.30:0,87,3979	0/0:40,0:40:99:0,105,5447	0/0:37,0:37:88.63:0,89,4520	0/0:20,0:18:42.11:0,42,1957	0/0:26,0:26:72.20:0,72,3292	0/0:76,0:76:99:0,193,8961	0/0:31,0:31:81.23:0,81,3798	0/0:24,0:24:60.17:0,60,2808	0/0:39,0:39:99:0,105,5386	0/0:21,0:21:57.18:0,57,2398	0/0:36,0:36:84.28:0,84,4109	0/0:31,0:30:78.25:0,78,3997	0/0:11,0:11:30.10:0,30,1368
chr10	45383005	.	T	TCTGA	7490.68	PASS	AB=0.935;AC=15;AF=0.268;AN=56;BaseQRankSum=-12.643;DP=939;FS=12.201;HRun=0;HaplotypeScore=164.5952;InbreedingCoeff=0.9006;MQ=73.28;MQ0=3;MQRankSum=0.901;QD=29.72;ReadPosRankSum=4.479;VQSLOD=4.0299;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:61,0:61:99:0,144,2096	0/0:13,0:13:20.74:0,21,184	0/0:21,0:14:18.04:0,18,189	0/0:53,0:40:46.47:0,46,531	1/1:4,22:28:21.07:517,21,0	0/0:12,0:12:17.20:0,17,151	0/0:25,0:25:22.97:0,23,208	0/0:39,0:39:63.07:0,63,673	0/0:42,0:42:93.17:0,93,1290	1/1:13,19:35:59.97:1116,60,0	1/1:9,13:22:20.90:517,21,0	0/0:46,0:46:99:0,102,1444	0/0:41,0:41:93.15:0,93,1307	0/0:29,0:29:48.11:0,48,699	1/1:8,32:42:60.68:1480,61,0	1/1:9,29:39:48.16:1183,48,0	0/0:43,0:43:99:0,105,1486	1/1:16,18:34:93.18:1890,93,0	0/0:25,0:22:42.03:0,42,538	0/0:28,0:28:72.11:0,72,937	0/0:75,0:75:99:0,153,2035	0/0:31,0:31:63.13:0,63,893	0/0:26,0:26:39.05:0,39,789	0/0:41,0:41:87.14:0,87,1191	1/1:8,14:23:30.10:721,30,0	0/1:27,2:29:66.73:67,0,1028	0/0:27,0:26:63.17:0,63,972	0/0:9,0:9:15.05:0,15,249
chr10	45383603	.	GTATGTGTCTGTATGTATC	G	745.22	PASS	AB=0.866;AC=4;AF=0.071;AN=56;BaseQRankSum=7.749;DP=1134;FS=14.127;HRun=0;HaplotypeScore=540.2765;InbreedingCoeff=-0.0769;MQ=53.98;MQ0=3;MQRankSum=-6.050;QD=6.01;ReadPosRankSum=-3.995;VQSLOD=-0.4620;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:59,0:59:99:0,135,7092	0/1:14,7:21:99:121,0,1893	0/0:55,0:41:99:0,107,3438	0/0:45,0:36:88.52:0,89,3014	0/0:23,8:31:47.67:0,48,2891	0/0:23,0:23:54.18:0,54,2685	0/0:40,0:40:60.22:0,60,3259	0/0:44,0:43:99:0,123,5078	0/0:41,0:41:99:0,105,5926	0/1:55,3:58:99:509,0,10298	0/0:19,4:23:51.17:0,51,2682	0/0:35,0:34:72.23:0,72,3703	0/0:34,0:34:49.19:0,49,5895	0/0:48,0:48:99:0,108,6674	0/0:49,0:49:99:0,108,6432	0/0:29,0:29:70.86:0,71,4165	0/0:52,0:52:99:0,147,8680	0/0:34,0:34:99:0,102,5377	0/0:30,0:29:81.16:0,81,3999	0/0:27,2:29:75.66:0,76,4180	0/0:107,0:107:99:0,278,15139	0/0:32,3:35:62.30:0,62,3541	0/0:26,8:34:71.37:0,71,4215	0/0:59,0:58:99:0,125,7709	0/0:33,4:37:93.69:0,94,5484	0/0:37,0:37:99:0,108,6163	0/1:18,1:19:99:109,0,2513	0/1:20,6:26:99:116,0,3666
chr10	45383654	.	TGTGTGA	T	1117.20	PASS	AB=0.700;AC=4;AF=0.071;AN=56;BaseQRankSum=6.532;DP=1271;FS=40.912;HRun=0;HaplotypeScore=364.5302;InbreedingCoeff=0.4503;MQ=44.64;MQ0=31;MQRankSum=-6.603;QD=18.31;ReadPosRankSum=-3.241;VQSLOD=1.8813;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:85.97:0,86,2694	1/1:3,5:8:12.04:242,12,0	0/0:79,0:19:47.56:0,48,928	0/0:93,0:20:29:0,29,755	0/0:36,0:36:54.85:0,55,1610	0/1:17,5:22:17.50:347,0,17	0/1:9,22:31:18.42:639,0,18	0/0:67,0:64:99:0,125,3257	0/0:41,0:41:31.07:0,31,2059	0/0:63,0:62:99:0,170,4200	0/0:39,0:39:58.53:0,59,1722	0/0:41,0:41:83.98:0,84,2535	0/0:42,0:42:91.88:0,92,2591	0/0:43,0:43:86.94:0,87,2680	0/0:56,0:56:83.82:0,84,2654	0/0:38,0:38:70.36:0,70,2241	0/0:44,0:44:89.83:0,90,2929	0/0:26,0:26:72.08:0,72,2340	0/0:48,0:36:73.93:0,74,2013	0/0:37,0:37:73.17:0,73,2107	0/0:84,0:76:99:0,152,4806	0/0:50,0:50:66.21:0,66,2054	0/0:38,0:38:56.54:0,57,1814	0/0:63,0:62:99:0,117,3871	0/0:33,0:33:59.19:0,59,1897	0/0:52,0:51:99:0,130,3633	0/0:26,0:26:34.59:0,35,1391	0/0:18,0:18:31.32:0,31,935
chr10	45387607	.	G	GT	18026.86	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-7.882;DP=693;FS=2.867;HRun=7;HaplotypeScore=83.7295;InbreedingCoeff=0.9886;MQ=88.26;MQ0=0;MQRankSum=-8.491;QD=29.50;ReadPosRankSum=4.721;VQSLOD=5.1147;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,45:50:99:1515,126,0	1/1:0,14:14:33.10:398,33,0	0/0:33,0:33:75.25:0,75,680	0/0:22,0:24:54:0,54,496	1/1:5,26:31:84.23:993,84,0	1/1:8,16:24:42.13:506,42,0	1/1:4,12:16:27.08:326,27,0	1/1:4,25:29:75.23:905,75,0	1/1:1,14:15:39.12:470,39,0	1/1:4,25:29:75.22:891,75,0	1/1:2,16:18:45.98:529,46,0	1/1:2,26:28:69.21:833,69,0	1/1:4,18:22:54.17:652,54,0	1/1:3,23:26:60.18:725,60,0	1/1:3,26:29:66.20:797,66,0	1/1:0,19:19:45.14:544,45,0	0/0:23,0:23:66.11:0,66,637	1/1:1,25:26:69.21:834,69,0	1/1:6,24:30:72.17:829,72,0	1/1:0,22:22:57.13:672,57,0	1/1:4,26:30:72.22:869,72,0	1/1:3,20:23:60.18:725,60,0	1/1:3,13:16:39.12:467,39,0	1/1:1,29:30:84.25:1015,84,0	1/1:2,17:20:48.15:579,48,0	1/1:1,23:24:69.21:832,69,0	1/1:3,32:35:81.25:977,81,0	1/1:0,5:5:12.04:145,12,0
chr10	45387843	.	CTTT	C	4533.28	PASS	AB=0.762;AC=20;AF=0.357;AN=56;BaseQRankSum=-8.533;DP=606;FS=12.836;HRun=14;HaplotypeScore=128.2164;InbreedingCoeff=0.8313;MQ=71.44;MQ0=0;MQRankSum=-2.223;QD=17.78;ReadPosRankSum=4.107;VQSLOD=2.2247;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,20:31:47.42:581,47,0	0/0:3,0:11:23.93:0,24,214	0/1:20,0:17:8.19:8,0,221	0/0:19,0:14:9.32:0,9,186	0/0:9,0:28:67.22:0,67,567	0/0:7,0:22:50.97:0,51,380	0/0:6,0:17:41.38:0,41,327	1/1:11,22:34:20.30:615,20,0	1/1:6,9:15:23.97:264,24,0	0/0:14,0:25:52.73:0,53,450	0/0:4,0:16:36.52:0,37,278	1/1:2,20:22:26.52:315,27,0	1/1:7,16:23:19.44:452,19,0	1/1:5,20:27:44.19:629,44,0	0/0:23,0:25:69.16:0,69,1107	0/0:7,0:17:43.78:0,44,314	0/0:25,0:26:63.18:0,63,1080	0/0:15,1:24:12.98:0,13,403	0/0:17,0:20:45.10:0,45,693	0/0:22,0:25:67.36:0,67,1013	0/0:18,0:19:48.10:0,48,758	1/1:3,16:20:32.90:378,33,0	1/1:1,20:23:56.08:643,56,0	1/1:4,10:14:23.97:277,24,0	0/0:12,1:22:21.04:0,21,441	0/1:10,12:23:30.04:372,0,30	0/0:29,0:32:93.22:0,93,1443	0/0:3,0:3:9.03:0,9,164
chr10	45387855	.	TTTC	T	1460.60	PASS	AB=0.970;AC=15;AF=0.268;AN=56;BaseQRankSum=3.255;DP=630;FS=7.306;HRun=0;HaplotypeScore=139.2681;InbreedingCoeff=0.0571;MQ=72.48;MQ0=1;MQRankSum=-4.008;QD=4.82;ReadPosRankSum=5.538;VQSLOD=1.8572;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:30,1:31:99:179,0,100	0/0:11,0:11:32.90:0,33,290	0/1:25,1:19:4.66:5,0,246	0/0:20,0:15:29.38:0,29,251	0/0:29,0:29:40.72:0,41,610	0/0:21,0:21:23.65:0,24,345	0/0:20,0:20:58.28:0,58,442	0/1:29,1:30:13.85:254,0,14	0/1:13,1:14:42.83:76,0,43	0/1:25,0:25:3.01:3,0,392	0/0:20,0:20:29.43:0,29,372	0/1:22,0:22:2.54:115,0,3	0/1:23,2:25:45.21:159,0,45	1/1:23,2:25:48.88:354,49,0	0/0:27,0:27:74.43:0,74,981	0/0:18,0:18:27.28:0,27,307	0/0:26,0:26:72.05:0,72,1028	0/1:23,0:23:0.59:1,0,384	0/0:18,0:18:50.86:0,51,707	0/0:29,0:29:53.89:0,54,864	0/0:19,0:19:47.32:0,47,705	0/1:19,1:20:11.31:123,0,11	0/1:26,0:26:40.69:155,0,41	1/1:13,0:13:1.56:88,2,0	0/0:22,0:22:20.94:0,21,381	0/1:22,1:23:99:106,0,162	0/0:38,0:38:97.46:0,97,1332	0/0:9,0:9:26.51:0,27,287
chr10	45388247	.	T	TTATA	55.50	PASS	AB=0.833;AC=8;AF=0.267;AN=30;BaseQRankSum=-2.767;DP=296;FS=3.941;HRun=0;HaplotypeScore=132.9767;InbreedingCoeff=0.3024;MQ=63.49;MQ0=1;MQRankSum=0.433;QD=0.62;ReadPosRankSum=-0.700;VQSLOD=2.5276;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:0.89:0,1,2	0/1:1,0:1:0:0,0,0	./.	./.	1/1:18,0:18:2.64:21,3,0	./.	./.	1/1:47,0:47:1.83:4,2,0	./.	./.	1/1:14,0:14:0.89:2,1,0	0/0:5,0:5:2.92:0,3,17	./.	0/0:6,0:6:2.99:0,3,23	./.	./.	0/1:5,5:10:9:112,0,9	0/0:14,0:14:6:0,6,54	0/0:15,0:15:5.93:0,6,54	0/0:22,0:22:1.55:0,2,4	./.	./.	0/0:7,0:7:0:0,0,0	./.	./.	0/0:20,0:20:14.60:0,15,117	0/0:17,0:17:6:0,6,54	0/0:19,0:19:6:0,6,54
chr10	45388265	.	ATATATATATATATATATATATATATGTGTG	A	7148.92	PASS	AB=1.000;AC=32;AF=0.800;AN=40;BaseQRankSum=3.119;DP=199;FS=0.000;HRun=0;HaplotypeScore=196.9166;InbreedingCoeff=0.3689;MQ=38.70;MQ0=3;MQRankSum=-1.813;QD=42.55;ReadPosRankSum=2.361;VQSLOD=3.6785;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:6,0:6:60.70:87,0,61	0/0:2,0:2:3.01:0,3,91	./.	./.	1/1:13,0:13:24.02:530,24,0	0/0:2,0:2:0.47:0,0,1	./.	1/1:38,0:37:78.49:1164,78,0	./.	1/1:5,0:5:11.94:115,12,0	1/1:11,0:11:21.05:558,21,0	1/1:3,0:3:5.95:118,6,0	./.	1/1:5,0:5:3.01:93,3,0	1/1:2,0:2:6.02:86,6,0	1/1:3,0:3:9.01:93,9,0	0/0:8,0:8:9.03:0,9,847	1/1:6,0:6:17.93:528,18,0	1/1:9,2:11:24.08:788,24,0	1/1:11,1:12:6.02:294,6,0	./.	./.	0/1:2,0:2:42.76:68,0,43	./.	1/1:8,0:8:21.06:246,21,0	1/1:21,0:21:19.86:1010,20,0	1/1:10,2:12:24.08:792,24,0	1/1:8,2:10:15.05:579,15,0
chr10	45388267	.	ATATATATATATATATATATATATGTGTG	A	6851.96	PASS	AB=1.000;AC=30;AF=0.750;AN=40;BaseQRankSum=2.956;DP=181;FS=1.354;HRun=0;HaplotypeScore=175.6174;InbreedingCoeff=0.2126;MQ=39.44;MQ0=3;MQRankSum=-1.402;QD=45.38;ReadPosRankSum=-0.133;VQSLOD=4.0609;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:5,0:5:17.57:114,0,18	0/0:2,0:2:3.01:0,3,69	./.	./.	1/1:10,0:10:20.36:397,20,0	0/0:2,0:2:0.47:0,0,1	./.	1/1:2,37:38:99:1815,108,0	./.	0/1:4,0:4:10.80:12,0,11	1/1:9,0:9:17.63:436,18,0	1/1:3,0:3:6.02:166,6,0	./.	1/1:5,0:5:3.01:117,3,0	1/1:2,0:2:5.78:32,6,0	1/1:3,0:3:6.32:35,6,0	0/0:8,0:8:9.03:0,9,802	0/1:6,0:6:17.26:354,0,17	1/1:8,0:8:23.71:573,24,0	1/1:10,0:10:6.02:241,6,0	./.	./.	0/1:2,0:2:18.47:95,0,18	./.	1/1:7,0:7:20.54:123,21,0	1/1:1,19:20:42.05:1354,42,0	1/1:10,0:10:21.83:544,22,0	1/1:8,0:8:13.16:447,13,0
chr10	45388279	.	ATATATATATATGTGTGTGTGTG	A	3597.73	PASS	AB=1.000;AC=31;AF=0.674;AN=46;BaseQRankSum=1.260;DP=211;FS=31.265;HRun=0;HaplotypeScore=185.5757;InbreedingCoeff=0.4188;MQ=36.95;MQ0=7;MQRankSum=-3.325;QD=26.07;ReadPosRankSum=0.639;VQSLOD=1.4230;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:8,0:8:3.01:144,3,0	0/0:3,0:3:3.01:0,3,100	./.	./.	1/1:12,2:14:9.29:335,9,0	0/0:3,0:3:5.05:0,5,103	0/0:4,0:4:3.01:0,3,72	0/0:39,0:37:34.24:0,34,257	./.	1/1:6,0:6:11.80:77,12,0	1/1:5,2:7:11.74:367,12,0	0/1:6,0:6:0.92:144,0,1	./.	1/1:4,0:4:3.01:151,3,0	1/1:3,0:3:3.88:26,4,0	1/1:2,0:2:2.84:14,3,0	0/0:9,0:9:14.06:0,14,657	1/1:10,2:11:17.59:417,18,0	1/1:15,0:14:3.94:338,4,0	1/1:7,0:7:3.62:190,4,0	0/1:4,0:4:0:0,0,0	./.	1/1:3,0:3:2.75:134,3,0	0/0:1,0:1:0.47:0,0,1	1/1:10,0:10:8.62:46,9,0	0/1:19,0:19:30.53:472,0,31	1/1:11,0:11:15.32:404,15,0	1/1:7,0:7:6.02:338,6,0
chr10	45388283	.	ATATATATGTGTGTGTGTG	A	2623.67	PASS	AB=1.000;AC=26;AF=0.591;AN=44;BaseQRankSum=2.226;DP=203;FS=30.396;HRun=0;HaplotypeScore=169.4533;InbreedingCoeff=0.1295;MQ=36.24;MQ0=7;MQRankSum=-3.533;QD=20.18;ReadPosRankSum=0.977;VQSLOD=1.1785;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:6,1:7:3.01:141,3,0	0/0:2,0:2:3.01:0,3,97	./.	./.	1/1:15,0:15:16.31:264,16,0	0/0:3,0:3:5.05:0,5,103	0/0:4,0:4:3.01:0,3,72	0/0:39,0:37:28.41:0,28,235	./.	0/1:4,0:4:6.59:47,0,7	1/1:6,0:6:11.74:276,12,0	1/1:6,1:7:6.01:171,6,0	./.	1/1:3,1:4:3.01:145,3,0	1/1:3,0:3:3.73:17,4,0	1/1:3,0:3:5.80:33,6,0	0/0:8,0:8:10.85:0,11,557	0/1:12,0:11:13.59:303,0,14	0/1:14,0:13:60.18:231,0,60	0/1:7,0:7:15.59:116,0,16	./.	./.	1/1:2,1:3:2.75:129,3,0	0/0:1,0:1:0.47:0,0,1	1/1:9,0:9:8.62:46,9,0	1/1:19,0:19:3.52:374,4,0	0/1:9,0:9:42.18:232,0,42	0/1:8,0:8:17.32:238,0,17
chr10	45388289	.	ATGTGTG	A	2462.38	PASS	AC=32;AF=0.762;AN=42;BaseQRankSum=4.615;DP=194;FS=6.485;HRun=0;HaplotypeScore=122.2365;InbreedingCoeff=0.4784;MQ=40.69;MQ0=6;MQRankSum=-2.055;QD=15.68;ReadPosRankSum=1.869;VQSLOD=2.3486;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:7,0:7:3.01:37,3,0	0/0:0,0:2:2.99:0,3,23	./.	./.	1/1:11,0:11:4.83:48,5,0	0/0:1,0:3:3.87:0,4,25	0/0:5,0:5:5.93:0,6,42	1/1:39,0:37:42.10:767,42,0	./.	1/1:4,0:4:9.03:139,9,0	1/1:5,0:5:6.02:84,6,0	1/1:7,0:7:3.01:42,3,0	1/1:4,0:4:2.74:12,3,0	1/1:4,0:4:3.01:42,3,0	./.	./.	0/0:9,0:9:9.92:0,10,246	1/1:12,0:11:17.86:262,18,0	1/1:9,6:13:26.58:387,27,0	1/1:3,2:5:6.02:80,6,0	./.	./.	1/1:4,0:4:2.66:26,3,0	0/0:1,0:1:0:0,0,0	1/1:7,0:7:3.01:38,3,0	1/1:19,0:19:21.07:373,21,0	1/1:5,1:6:9.03:126,9,0	1/1:6,2:8:9.03:124,9,0
chr10	45388305	.	ATATATG	A	898.36	PASS	AB=0.960;AC=20;AF=0.385;AN=52;BaseQRankSum=5.467;DP=216;FS=17.895;HRun=0;HaplotypeScore=127.5516;InbreedingCoeff=0.1270;MQ=48.81;MQ0=5;MQRankSum=-4.688;QD=8.72;ReadPosRankSum=5.874;VQSLOD=1.1179;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:12,0:12:12.80:30,0,13	0/0:2,0:2:3.01:0,3,81	./.	0/0:6,0:4:1.98:0,2,35	0/1:8,2:10:4.62:47,0,5	0/0:4,0:4:9.03:0,9,272	0/0:5,0:5:6.02:0,6,161	0/0:45,0:43:80.63:0,81,1530	0/0:2,0:2:2.04:0,2,6	0/1:6,0:6:42.47:42,0,74	1/1:4,2:6:1.44:98,1,0	0/1:7,0:7:9.01:40,0,9	0/0:2,0:2:2.92:0,3,17	1/1:3,0:3:6:71,6,0	0/0:4,0:4:2.74:0,3,26	0/1:4,0:4:11.64:12,0,52	0/0:11,0:11:20.97:0,21,469	0/1:9,2:10:1.37:164,0,1	0/1:13,0:12:52.72:193,0,53	1/1:7,0:7:5.95:70,6,0	0/0:8,0:8:2.99:0,3,24	./.	1/1:4,0:4:2.67:31,3,0	0/0:1,0:1:0:0,0,0	0/1:9,0:9:5.23:5,0,47	0/0:21,0:21:28.91:0,29,450	1/1:6,0:6:8.98:124,9,0	1/1:5,0:5:4.02:117,4,0
chr10	45388307	.	ATATG	A	644.82	PASS	AB=0.978;AC=19;AF=0.365;AN=52;BaseQRankSum=5.674;DP=218;FS=13.517;HRun=0;HaplotypeScore=119.0432;InbreedingCoeff=0.0646;MQ=49.74;MQ0=5;MQRankSum=-4.628;QD=6.20;ReadPosRankSum=6.465;VQSLOD=1.1478;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:12,1:13:13.01:30,0,13	0/0:2,0:2:3.01:0,3,58	./.	0/0:6,0:4:4.67:0,5,23	0/1:10,0:10:12.19:12,0,82	0/0:4,0:4:9.03:0,9,202	0/0:5,0:5:6.02:0,6,109	0/0:43,0:41:86.66:0,87,1312	0/0:2,0:2:2.04:0,2,6	0/1:6,0:6:40.05:40,0,94	0/1:6,0:6:42.31:45,0,42	0/1:6,1:7:9.03:40,0,9	1/1:2,0:2:2.94:18,3,0	1/1:3,1:4:9.03:143,9,0	0/0:5,0:5:8.87:0,9,84	0/0:4,0:4:9.82:0,10,86	0/0:12,0:12:23.95:0,24,387	0/1:11,0:10:19.31:117,0,19	0/1:14,0:13:99:135,0,110	1/1:7,0:7:5.95:47,6,0	0/0:9,0:9:3:0,3,47	./.	1/1:3,1:4:2.67:29,3,0	0/0:1,0:1:0:0,0,0	0/1:9,0:9:2.71:3,0,118	0/0:19,0:19:35.52:0,36,415	1/1:6,0:6:8.97:77,9,0	0/1:5,0:5:34.58:61,0,35
chr10	45388311	.	G	GTA	2434.52	PASS	AB=1.000;AC=29;AF=0.580;AN=50;BaseQRankSum=0.572;DP=234;FS=1.421;HRun=0;HaplotypeScore=103.1772;InbreedingCoeff=0.6425;MQ=58.47;MQ0=3;MQRankSum=-4.484;QD=21.17;ReadPosRankSum=1.033;VQSLOD=4.1141;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:2,0:14:0.21:0,0,1	0/0:2,0:2:3.01:0,3,38	0/0:3,0:2:3.01:0,3,43	0/0:7,0:5:1.44:0,1,29	1/1:2,9:11:17.79:251,18,0	0/0:4,0:4:9.02:0,9,102	0/0:5,0:5:6.01:0,6,60	0/0:43,0:42:95.95:0,96,990	./.	1/1:0,6:6:18.06:270,18,0	1/1:3,4:7:14.63:169,15,0	0/0:7,0:7:1.66:0,2,8	1/1:3,0:3:1.55:4,2,0	0/1:6,0:6:2.69:21,0,3	1/1:0,5:5:9.03:148,9,0	1/1:4,1:5:15:209,15,0	0/0:12,0:12:17.96:0,18,213	1/1:3,11:13:20.85:242,21,0	1/1:1,14:14:42.14:615,42,0	1/1:1,7:8:6.02:65,6,0	1/1:0,9:9:3.01:51,3,0	./.	1/1:4,0:4:0.47:1,0,0	./.	1/1:0,9:9:15.05:235,15,0	0/0:17,0:17:35.94:0,36,343	1/1:1,6:7:11.96:117,12,0	1/1:2,4:6:15.05:200,15,0
chr10	45389787	.	CA	C	351.26	PASS	AC=14;AF=0.269;AN=52;BaseQRankSum=5.966;DP=185;FS=0.000;HRun=7;HaplotypeScore=25.1581;InbreedingCoeff=0.6316;MQ=86.08;MQ0=1;MQRankSum=-1.311;QD=18.49;ReadPosRankSum=-1.013;VQSLOD=2.0068;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,8:8:21.04:211,21,0	0/0:3,0:3:9.03:0,9,113	0/0:5,0:4:7.65:0,8,101	0/0:15,0:10:1.72:0,2,52	0/0:4,0:4:12.04:0,12,151	0/0:1,0:1:3.01:0,3,38	0/0:2,0:2:6.02:0,6,75	0/0:22,0:22:60.19:0,60,754	1/1:1,1:2:3:30,3,0	0/0:5,0:5:12.03:0,12,140	./.	1/1:0,4:4:12.02:120,12,0	1/1:0,2:2:6.01:60,6,0	1/1:0,1:1:3.01:30,3,0	0/0:3,0:3:6.02:0,6,75	0/0:2,0:2:3.01:0,3,38	0/0:22,0:22:63.20:0,63,792	0/0:26,0:26:75.24:0,75,943	0/0:13,0:13:27.08:0,27,333	0/0:6,0:6:18.05:0,18,215	0/0:2,0:2:6.02:0,6,75	1/1:1,0:1:2.99:24,3,0	1/1:0,1:1:3.01:30,3,0	./.	0/0:2,0:2:6.02:0,6,75	0/0:13,0:13:36.11:0,36,451	0/0:8,0:8:18.06:0,18,226	0/0:11,0:11:33.11:0,33,412
chr10	45389869	.	AT	A	2890.08	PASS	AB=0.751;AC=42;AF=0.750;AN=56;BaseQRankSum=7.074;DP=273;FS=24.425;HRun=9;HaplotypeScore=45.1334;InbreedingCoeff=0.6083;MQ=74.44;MQ0=2;MQRankSum=-2.626;QD=13.70;ReadPosRankSum=0.504;VQSLOD=1.5361;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:5,0:15:1.97:28,0,2	0/0:3,0:3:6.01:0,6,61	1/1:8,0:2:2.04:6,2,0	0/1:18,1:15:1.86:2,0,77	1/1:1,10:11:24.01:220,24,0	0/0:11,0:11:33.10:0,33,381	0/0:2,0:2:6.02:0,6,69	0/0:20,0:20:48.14:0,48,554	1/1:0,0:7:14.26:42,14,0	1/1:0,9:9:27.01:247,27,0	1/1:0,8:8:24.01:219,24,0	1/1:0,0:5:9.93:28,10,0	1/1:0,0:2:4.72:17,5,0	1/1:1,0:6:7.93:23,8,0	1/1:1,7:8:18:165,18,0	1/1:0,5:6:17.05:142,17,0	0/0:26,0:26:66.91:0,67,741	1/1:3,20:23:42.39:455,42,0	0/1:1,8:9:4.40:168,0,4	1/1:1,12:13:35.89:303,36,0	1/1:0,6:6:15.01:137,15,0	1/1:0,0:1:2.04:6,2,0	1/1:1,0:6:11.78:33,12,0	1/1:0,0:2:2.04:6,2,0	1/1:0,9:9:24.01:220,24,0	0/1:11,1:12:0.40:0,0,241	1/1:2,11:13:30.01:275,30,0	1/1:4,8:12:35.98:319,36,0
chr10	45390180	.	GA	G	3115.29	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=3.518;DP=511;FS=4.032;HRun=10;HaplotypeScore=64.2329;InbreedingCoeff=0.9698;MQ=71.62;MQ0=0;MQRankSum=0.740;QD=18.01;ReadPosRankSum=5.068;VQSLOD=4.3295;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,48:51:86.79:982,87,0	0/0:11,0:11:30.07:0,30,323	0/0:12,0:11:6.59:0,7,94	0/0:11,0:10:11.33:0,11,90	0/0:9,0:10:20.89:0,21,213	0/0:23,0:23:66.16:0,66,713	0/0:18,0:18:45.08:0,45,484	0/0:25,0:26:60.02:0,60,639	1/1:4,18:22:50.98:443,51,0	0/0:10,0:10:21.06:0,21,232	0/0:10,0:11:30.03:0,30,317	1/1:4,24:28:59.98:521,60,0	1/1:4,10:14:26.98:234,27,0	1/1:4,16:20:13.52:333,14,0	0/0:14,0:15:41.90:0,42,420	0/0:16,0:15:30.03:0,30,317	0/0:32,0:33:87.07:0,87,943	0/0:17,0:18:50.92:0,51,525	0/0:7,0:25:63.01:0,63,363	0/0:1,0:13:34.50:0,35,193	0/0:7,0:20:42.91:0,43,227	1/1:0,7:7:14.98:130,15,0	1/1:2,9:11:23.98:208,24,0	1/1:2,18:20:53.99:469,54,0	0/0:11,0:12:35.93:0,36,379	0/0:23,0:23:60.10:0,60,642	0/0:0,0:17:45.68:0,46,234	0/0:4,0:13:31.40:0,31,166
chr10	45390372	.	CAA	C	1564.56	PASS	AB=0.642;AC=15;AF=0.268;AN=56;BaseQRankSum=-3.074;DP=466;FS=2.294;HRun=14;HaplotypeScore=122.5802;InbreedingCoeff=0.6922;MQ=47.17;MQ0=9;MQRankSum=3.229;QD=10.43;ReadPosRankSum=-0.437;VQSLOD=2.3668;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:27:19.95:0,20,331	0/1:3,4:7:5.40:96,0,5	0/0:8,0:5:12.03:0,12,136	0/0:8,0:6:17.37:0,17,168	0/0:15,0:17:32.65:0,33,209	0/0:2,0:21:37.43:0,37,130	0/1:5,2:16:26.03:26,0,115	1/1:10,9:22:14.29:257,14,0	0/0:17,0:17:28.96:0,29,223	0/0:17,0:21:32.04:0,32,253	0/0:17,0:20:43.21:0,43,332	0/0:23,0:23:40.93:0,41,318	0/0:11,0:11:17.99:0,18,162	0/0:14,0:14:17.98:0,18,149	0/0:9,0:13:23.89:0,24,224	0/0:15,0:15:32.76:0,33,251	0/0:28,0:34:79.13:0,79,944	0/0:13,0:13:19.21:0,19,129	1/1:10,8:16:26.18:264,26,0	1/1:7,14:20:10.41:230,10,0	1/1:4,13:16:35.97:333,36,0	0/0:11,0:11:17.85:0,18,135	0/0:14,0:13:29.35:0,29,207	0/0:8,0:6:3.03:0,3,41	0/0:8,0:14:23.90:0,24,211	0/1:13,8:23:42.53:135,0,43	1/1:4,13:16:35.73:317,36,0	1/1:5,2:5:11.48:95,11,0
chr10	45390381	.	A	ACAAAAACAAAAAAAC	15243.35	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=-4.270;DP=511;FS=7.727;HRun=0;HaplotypeScore=202.3447;InbreedingCoeff=0.4454;MQ=57.26;MQ0=5;MQRankSum=-11.591;QD=55.23;ReadPosRankSum=2.858;VQSLOD=3.5001;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,11:28:74.93:3463,75,0	0/0:9,0:9:26.99:0,27,589	0/0:15,0:12:30.05:0,30,430	0/0:10,0:8:0.70:0,1,268	0/1:20,0:20:75.48:95,0,75	0/0:22,0:21:54.10:0,54,1831	0/0:17,0:17:45.07:0,45,1164	0/0:21,0:21:51.54:0,52,915	1/1:1,10:22:30.08:2167,30,0	0/1:18,0:17:55.07:55,0,151	0/1:17,0:17:73.13:77,0,73	1/1:0,14:33:42.62:3010,43,0	1/1:1,5:15:20.86:1116,21,0	1/1:0,5:24:18.06:1297,18,0	0/1:11,0:11:25.71:26,0,82	0/1:17,0:16:53.54:106,0,54	0/0:32,0:32:81.22:0,81,3167	0/1:12,0:11:41.46:55,0,41	0/0:16,0:16:19.21:0,19,626	0/0:23,0:23:53.99:0,54,1205	0/0:21,0:20:57.05:0,57,1360	1/1:0,6:15:18.06:1299,18,0	1/1:2,9:18:29.50:2141,29,0	1/1:1,3:8:9.03:329,9,0	0/1:15,0:14:7.44:7,0,106	0/0:22,0:22:49.79:0,50,1147	0/0:20,0:19:50.82:0,51,1056	0/0:7,0:5:11.29:0,11,310
chr10	45392739	.	T	TA	3429.21	PASS	AB=0.578;AC=14;AF=0.250;AN=56;BaseQRankSum=-11.745;DP=656;FS=12.459;HRun=10;HaplotypeScore=87.6938;InbreedingCoeff=0.8377;MQ=76.00;MQ0=0;MQRankSum=0.985;QD=20.17;ReadPosRankSum=1.630;VQSLOD=3.6085;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:10,20:30:34.69:476,0,35	0/0:13,0:15:33.97:0,34,252	0/0:16,0:16:26.91:0,27,217	0/0:19,0:19:22.08:0,22,232	0/0:34,0:36:81.93:0,82,652	0/0:24,0:24:46.66:0,47,361	0/0:17,1:19:14.60:0,15,318	0/0:46,0:46:95.74:0,96,777	1/1:5,13:18:11.45:327,11,0	0/0:41,0:41:99:0,105,854	0/0:18,0:19:43.51:0,44,348	1/1:4,12:16:33.08:352,33,0	1/1:1,10:11:30.04:308,30,0	0/1:4,16:20:1.33:382,0,1	0/0:19,0:22:45.03:0,45,338	0/0:17,0:19:45.98:0,46,351	0/0:28,0:29:73.95:0,74,597	0/0:18,0:18:42.80:0,43,343	0/0:20,0:22:39.97:0,40,307	0/0:31,1:34:52.95:0,53,615	0/0:8,0:9:20.01:0,20,153	1/1:6,16:23:44.95:462,45,0	1/1:9,25:34:63.15:667,63,0	1/1:1,17:18:23.48:454,23,0	0/0:17,1:21:13.99:0,14,300	0/0:37,0:37:95.74:0,96,776	0/0:28,0:28:68.84:0,69,557	0/0:12,0:12:32.96:0,33,271
chr10	45393459	.	CAAA	C	412.17	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=2.086;DP=514;FS=4.683;HRun=18;HaplotypeScore=76.2527;InbreedingCoeff=0.7509;MQ=47.93;MQ0=12;MQRankSum=4.370;QD=9.16;ReadPosRankSum=6.083;VQSLOD=-0.3991;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:27:48.71:0,49,642	0/0:6,0:6:9.03:0,9,119	0/0:11,0:3:5.86:0,6,35	0/0:10,0:7:14.65:0,15,135	0/0:28,0:28:52.23:0,52,590	1/1:11,12:21:33.47:336,33,0	1/1:14,6:19:4.48:185,4,0	0/0:36,0:27:48.47:0,48,598	0/0:21,0:21:36.12:0,36,524	0/0:28,0:28:63.02:0,63,798	0/0:13,0:13:20.82:0,21,238	0/0:15,0:15:30.06:0,30,416	0/0:19,0:16:26.95:0,27,315	0/0:12,0:12:15.05:0,15,191	0/0:18,0:17:45.11:0,45,652	0/0:17,0:16:28.60:0,29,363	0/0:29,0:30:37.11:0,37,424	0/0:9,0:10:17.70:0,18,225	0/0:21,0:19:39.09:0,39,544	0/0:9,0:17:30.03:0,30,422	0/0:8,0:10:15:0,15,181	0/0:11,0:11:9.03:0,9,148	0/0:18,0:15:27.04:0,27,325	0/0:5,0:4:0:0,0,0	0/0:15,0:13:18.06:0,18,263	0/0:26,0:22:43.21:0,43,537	0/0:22,0:22:45.46:0,45,581	0/0:20,0:20:14.97:0,15,164
chr10	45393952	.	CAAA	C	816.38	PASS	AB=0.609;AC=3;AF=0.054;AN=56;BaseQRankSum=-5.930;DP=456;FS=15.313;HRun=16;HaplotypeScore=93.9296;InbreedingCoeff=0.3987;MQ=74.16;MQ0=1;MQRankSum=-1.574;QD=15.40;ReadPosRankSum=0.111;VQSLOD=0.7916;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:22:45.70:0,46,474	0/0:4,0:8:9.74:0,10,85	0/0:30,0:19:20.70:0,21,185	0/0:27,0:16:20.35:0,20,202	0/0:16,0:18:42.11:0,42,645	0/0:10,0:9:12.88:0,13,122	0/0:3,0:3:7.64:0,8,56	1/1:12,12:24:38.79:401,39,0	0/0:12,0:11:7.54:0,8,43	0/0:36,0:38:96.31:0,96,1544	0/0:17,0:20:51.17:0,51,804	0/0:9,0:9:17.09:0,17,213	0/0:5,0:5:6.02:0,6,78	0/0:10,0:8:19.40:0,19,177	0/0:12,0:14:21.06:0,21,324	0/0:14,0:15:27.05:0,27,398	0/0:22,0:23:57.16:0,57,904	0/0:22,0:23:45.12:0,45,688	0/0:8,0:8:12:0,12,142	0/0:16,0:22:41.38:0,41,360	0/0:5,0:5:8.98:0,9,73	0/0:4,0:4:5.85:0,6,53	0/0:12,0:12:11.58:0,12,76	0/0:6,0:6:3.01:0,3,39	0/0:16,0:20:39.13:0,39,601	0/1:9,18:28:36.32:521,0,36	0/0:13,0:19:47.96:0,48,494	0/0:15,0:16:32.95:0,33,320
chr10	45393968	.	ACTT	A	942.67	PASS	AB=0.847;AC=9;AF=0.161;AN=56;BaseQRankSum=-2.354;DP=477;FS=22.437;HRun=0;HaplotypeScore=101.8579;InbreedingCoeff=-0.0815;MQ=72.51;MQ0=4;MQRankSum=-4.230;QD=8.27;ReadPosRankSum=-1.423;VQSLOD=1.1286;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:15,5:18:99:269,0,177	0/0:6,0:6:18.06:0,18,294	0/0:28,0:13:24.14:0,24,267	0/1:33,1:18:35.26:35,0,312	0/0:20,0:20:58.38:0,58,555	0/1:9,0:8:63.10:173,0,63	0/1:2,2:4:11.73:103,0,12	0/0:23,0:22:64.68:0,65,893	0/1:7,2:8:0.10:139,0,0	0/0:40,0:41:93.05:0,93,1178	0/0:25,0:25:50.05:0,50,606	0/1:7,1:8:30.54:31,0,163	0/0:8,0:8:15.72:0,16,100	0/1:12,3:12:99:125,0,108	0/0:11,0:11:20.96:0,21,198	0/0:13,0:13:30.54:0,31,275	0/0:26,0:25:75.25:0,75,1362	0/0:27,0:27:54.85:0,55,480	0/0:13,0:13:34.82:0,35,242	0/0:23,0:23:45.86:0,46,315	0/0:4,0:3:6.62:0,7,32	0/1:4,0:4:25.79:26,0,31	0/1:5,4:9:26.91:181,0,27	0/0:5,0:5:5.37:0,5,35	0/0:23,0:23:47.58:0,48,420	0/0:33,0:33:98.94:0,99,1393	0/0:21,0:21:49.20:0,49,393	0/0:12,0:12:29.74:0,30,162
chr10	45393971	.	T	TA	6890.98	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-3.490;DP=483;FS=14.005;HRun=7;HaplotypeScore=68.4546;InbreedingCoeff=0.8879;MQ=71.59;MQ0=4;MQRankSum=-1.637;QD=20.82;ReadPosRankSum=0.359;VQSLOD=3.3821;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:20:29.46:126,29,0	0/0:6,0:6:18.03:0,18,174	0/0:25,0:13:12.91:0,13,82	0/0:33,1:17:4.18:0,4,107	1/1:2,19:21:54.08:619,54,0	1/1:6,0:7:9.58:49,10,0	1/1:3,0:5:10.72:46,11,0	0/0:24,0:23:60.07:0,60,568	1/1:5,0:7:12.31:56,12,0	1/1:11,27:38:78.24:942,78,0	1/1:6,18:24:57.13:661,57,0	1/1:3,0:9:16.19:78,16,0	1/1:3,0:8:14.38:73,14,0	1/1:7,0:13:22.85:109,23,0	1/1:1,10:11:21.05:243,21,0	1/1:3,10:13:30.09:362,30,0	0/0:26,0:25:60.08:0,60,579	1/1:4,23:27:54.16:648,54,0	1/1:3,10:14:38.99:447,39,0	1/1:14,9:23:60.11:691,60,0	1/1:3,1:3:9.03:109,9,0	1/1:1,0:5:11.59:64,12,0	1/1:6,0:11:19.39:95,19,0	1/1:2,0:5:5.75:30,6,0	1/1:4,20:24:41.99:486,42,0	0/0:34,2:36:14.63:0,15,705	1/1:9,13:22:48.13:560,48,0	1/1:8,5:13:36.07:397,36,0
chr10	45394401	.	CACACACACACACACACACACACACACAT	C	10888.53	PASS	AB=0.871;AC=20;AF=0.370;AN=54;BaseQRankSum=0.447;DP=527;FS=17.707;HRun=0;HaplotypeScore=365.1999;InbreedingCoeff=0.8072;MQ=54.44;MQ0=21;MQRankSum=-9.423;QD=61.17;ReadPosRankSum=2.792;VQSLOD=2.2633;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:22:24.96:0,25,914	0/0:5,0:5:6.02:0,6,395	0/0:18,0:8:9.03:0,9,215	0/0:23,0:15:27.02:0,27,412	1/1:12,4:16:26.93:1058,27,0	0/0:20,0:19:39.13:0,39,1642	0/0:15,0:15:27.06:0,27,713	0/0:29,0:26:47.18:0,47,1390	0/0:28,0:28:60.21:0,60,5570	1/1:19,1:17:27.04:832,27,0	1/1:8,3:10:20.95:871,21,0	0/0:18,0:18:33.11:0,33,1781	0/0:14,0:13:27.09:0,27,2116	0/0:19,0:19:21.07:0,21,2022	1/1:14,5:17:39.12:1452,39,0	0/1:8,1:9:99:325,0,321	0/0:39,0:38:93.32:0,93,9407	0/1:16,4:20:99:1402,0,143	1/1:13,2:14:14.04:802,14,0	1/1:9,4:10:20.89:1101,21,0	1/1:18,1:15:23.27:306,23,0	0/0:19,0:18:26.78:0,27,1315	0/0:16,0:14:17.98:0,18,1166	0/0:30,0:30:54.17:0,54,4156	1/1:8,2:10:14.91:494,15,0	0/0:21,0:16:43.37:0,43,783	1/1:16,9:23:42.08:2246,42,0	./.
chr10	45394413	.	CACACACACACACACAT	C	5768.58	PASS	AB=1.000;AC=28;AF=0.519;AN=54;BaseQRankSum=5.484;DP=533;FS=4.656;HRun=0;HaplotypeScore=258.4205;InbreedingCoeff=0.4935;MQ=47.47;MQ0=30;MQRankSum=-5.422;QD=19.49;ReadPosRankSum=0.368;VQSLOD=3.4985;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:24:6.94:7,0,206	0/0:3,0:3:6.02:0,6,84	0/1:26,0:5:3.93:4,0,120	0/0:36,0:14:10.20:0,10,44	1/1:12,0:12:10.87:446,11,0	0/0:22,0:21:34.69:0,35,655	0/1:20,0:20:41.37:41,0,351	1/1:16,18:31:60.87:687,61,0	0/0:28,0:28:54.19:0,54,2907	1/1:15,0:12:10.49:131,10,0	1/1:10,0:9:12.04:383,12,0	0/0:18,0:18:9.17:0,9,948	0/0:15,0:14:6.16:0,6,1030	0/0:16,0:16:27.09:0,27,1258	1/1:17,0:15:13.94:559,14,0	0/1:8,0:7:99:106,0,174	0/0:45,0:44:99:0,99,5972	0/1:17,0:17:79.86:330,0,80	1/1:11,0:10:4.25:222,4,0	1/1:11,0:8:15.05:560,15,0	1/1:19,0:15:4.17:20,4,0	0/1:19,0:18:2.85:3,0,535	0/0:16,0:13:20.84:0,21,612	0/0:33,0:33:43.67:0,44,2457	1/1:9,0:9:6.02:224,6,0	1/1:16,4:15:33.08:1025,33,0	1/1:21,0:19:30.85:1019,31,0	./.
chr10	45394421	.	CACACACAT	C	5135.89	PASS	AB=1.000;AC=37;AF=0.685;AN=54;BaseQRankSum=1.070;DP=518;FS=2.059;HRun=0;HaplotypeScore=190.7376;InbreedingCoeff=-0.0128;MQ=46.48;MQ0=30;MQRankSum=-4.898;QD=12.62;ReadPosRankSum=-5.152;VQSLOD=2.6779;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:21:54.50:55,0,99	1/1:1,2:3:6.02:163,6,0	0/1:30,0:5:13.05:13,0,49	0/0:38,0:13:2.41:0,2,31	1/1:11,0:11:14.97:242,15,0	1/1:15,6:20:49.32:775,49,0	0/1:20,0:20:0.66:260,0,1	1/1:28,0:25:61.31:473,61,0	0/0:28,0:28:8.03:0,8,1222	1/1:10,0:9:19.08:158,19,0	1/1:8,0:7:11.93:185,12,0	0/1:22,0:22:99:117,0,349	0/1:16,0:15:68.35:68,0,356	0/1:16,0:16:15.92:16,0,442	1/1:15,0:13:17.99:299,18,0	0/1:4,0:5:50.27:50,0,70	0/0:45,0:44:90.03:0,90,3186	0/1:14,0:15:10.78:252,0,11	1/1:10,0:9:14.91:171,15,0	1/1:8,0:7:15.05:281,15,0	1/1:15,0:14:2.92:17,3,0	0/1:20,0:18:99:117,0,223	0/1:14,0:10:16.51:17,0,118	0/1:37,0:37:99:188,0,849	1/1:8,0:8:5.53:112,6,0	1/1:27,0:22:29.57:563,30,0	1/1:13,0:14:34.22:545,34,0	./.
chr10	45394422	.	AC	A	1134.28	PASS	AB=0.850;AC=23;AF=0.426;AN=54;BaseQRankSum=10.256;DP=505;FS=2.856;HRun=1;HaplotypeScore=151.1838;InbreedingCoeff=0.7550;MQ=46.70;MQ0=30;MQRankSum=-9.840;QD=7.61;ReadPosRankSum=4.256;VQSLOD=1.3037;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:21:25.68:0,26,346	1/1:3,0:3:0.94:2,1,0	0/1:30,0:6:1.11:1,0,174	0/0:38,0:12:18.84:0,19,256	1/1:6,2:8:15.31:91,15,0	0/0:21,0:20:43.65:0,44,516	0/0:19,0:19:42.14:0,42,540	0/0:28,0:25:54.17:0,54,708	0/0:29,0:29:69.17:0,69,885	1/1:5,5:7:20.25:224,20,0	1/1:5,0:4:9.54:36,10,0	0/0:22,0:22:48.16:0,48,635	0/0:16,0:15:36.10:0,36,430	0/0:16,0:16:33.09:0,33,383	1/1:8,6:12:29.01:183,29,0	0/1:5,2:6:28.42:56,0,28	0/0:46,0:45:99:0,119,1663	0/1:12,5:17:4.46:283,0,4	1/1:4,3:6:16.47:156,16,0	1/1:8,0:5:11.80:39,12,0	1/1:12,5:13:14.67:105,15,0	0/0:20,0:18:33.11:0,33,431	0/0:14,0:10:22.61:0,23,257	0/0:36,0:36:77.91:0,78,974	1/1:7,1:8:4.49:15,4,0	0/0:27,0:22:31.77:0,32,587	1/1:13,2:13:29.16:141,29,0	./.
chr10	45394534	.	A	AAG	10644.62	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-13.506;DP=619;FS=2.881;HRun=0;HaplotypeScore=70.8564;InbreedingCoeff=0.9817;MQ=76.95;MQ0=0;MQRankSum=0.938;QD=50.45;ReadPosRankSum=2.905;VQSLOD=6.0977;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,32:33:72.25:1462,72,0	0/0:9,0:9:24.08:0,24,391	0/0:25,0:25:66.16:0,66,1038	0/0:14,0:14:36.08:0,36,543	0/0:23,0:23:69.24:0,69,1109	1/1:0,23:23:66.23:1340,66,0	1/1:0,22:21:60.21:1219,60,0	0/0:29,0:29:87.24:0,87,1354	1/1:0,17:17:42.14:853,42,0	0/0:19,0:19:57.18:0,57,904	0/0:12,0:12:33.11:0,33,538	1/1:0,20:20:51.18:1035,51,0	1/1:1,17:18:45.15:914,45,0	1/1:2,15:17:45.15:914,45,0	0/0:23,0:23:66.21:0,66,1044	0/0:22,1:23:5.26:0,5,966	0/0:38,0:38:99:0,111,1785	0/0:24,0:23:72.24:0,72,1155	0/0:14,0:14:42.09:0,42,631	0/0:23,0:23:63.22:0,63,1027	0/0:33,0:33:93.32:0,93,1511	1/1:0,15:14:33.11:653,33,0	1/1:0,11:10:30.10:609,30,0	1/1:0,29:30:81.28:1645,81,0	0/0:25,0:25:60.20:0,60,978	0/0:29,0:29:81.25:0,81,1274	0/0:31,0:31:87.24:0,87,1363	0/0:14,0:14:35.79:0,36,587
chr10	45396145	.	CACACT	C	370.33	PASS	AC=12;AF=0.273;AN=44;BaseQRankSum=-1.113;DP=436;FS=2.138;HRun=0;HaplotypeScore=157.2698;InbreedingCoeff=0.8076;MQ=87.78;MQ0=0;MQRankSum=-3.313;QD=23.15;ReadPosRankSum=-2.958;VQSLOD=3.0242;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,163,3858	0/0:17,0:17:51.18:0,51,1648	0/0:20,0:19:54.16:0,54,1655	0/0:15,0:15:42.14:0,42,1223	1/1:1,0:1:3.01:48,3,0	0/0:28,0:28:84.29:0,84,1977	0/0:22,0:22:66.21:0,66,1555	0/0:27,0:27:81.28:0,81,2553	0/0:31,0:31:93.32:0,93,2165	1/1:1,0:1:3.01:58,3,0	./.	0/0:21,0:21:63.22:0,63,1441	0/0:30,0:30:90.31:0,90,2177	0/0:17,0:17:51.18:0,51,1274	./.	./.	0/0:33,0:33:99:0,99,3049	./.	1/1:0,10:10:28.84:219,29,0	1/1:1,0:1:3.01:46,3,0	./.	0/0:27,0:27:81.28:0,81,1994	0/0:25,0:25:75.26:0,75,1828	0/0:23,0:23:69.18:0,69,1599	1/1:1,0:1:3.01:50,3,0	0/0:29,0:29:87.30:0,87,2851	./.	1/1:2,0:2:6.02:92,6,0
chr10	45396382	.	TG	T	5646.46	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=11.882;DP=779;FS=0.675;HRun=3;HaplotypeScore=80.2655;InbreedingCoeff=0.9992;MQ=82.92;MQ0=0;MQRankSum=-4.789;QD=33.21;ReadPosRankSum=2.300;VQSLOD=5.3783;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:61,0:61:99:0,175,2496	0/0:15,0:15:45.15:0,45,648	0/0:27,0:27:78.21:0,78,1032	0/0:20,0:21:60.07:0,60,740	1/1:0,26:26:75.24:929,75,0	0/0:25,0:25:69.23:0,69,993	0/0:33,0:33:96.31:0,96,1362	0/0:22,0:22:60.19:0,60,846	0/0:23,0:23:66.21:0,66,934	1/1:2,28:30:84.26:1038,84,0	1/1:0,20:20:57.18:707,57,0	0/0:26,0:26:69.23:0,69,994	0/0:32,0:32:90.28:0,90,1258	0/0:34,0:34:99:0,99,1407	1/1:0,15:15:39.12:484,39,0	1/1:0,31:31:84.26:1041,84,0	0/0:52,0:52:99:0,153,2183	1/1:1,27:28:66.21:816,66,0	0/0:19,0:19:57.17:0,57,786	0/0:30,0:30:78.26:0,78,1120	0/0:36,0:36:99:0,108,1510	0/0:29,0:29:84.28:0,84,1203	0/0:25,0:25:75.25:0,75,1080	0/0:40,0:40:99:0,117,1664	1/1:0,20:20:51.16:632,51,0	0/0:25,1:26:38.05:0,38,998	0/0:26,0:26:75.25:0,75,1080	0/0:7,0:7:21.07:0,21,302
chr10	45396869	.	TGCGCGCGCGCGCGC	T	5611.92	PASS	AB=0.820;AC=31;AF=0.775;AN=40;BaseQRankSum=8.362;DP=428;FS=8.292;HRun=0;HaplotypeScore=208.4700;InbreedingCoeff=0.4187;MQ=61.13;MQ0=3;MQRankSum=-6.960;QD=20.19;ReadPosRankSum=1.449;VQSLOD=2.8712;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:18,15:34:0:0,0,0	1/1:5,0:6:9.03:210,9,0	0/0:8,0:7:6.02:0,6,100	0/0:14,0:9:6.02:0,6,86	./.	1/1:6,10:21:9.03:298,9,0	1/1:14,8:22:3.01:119,3,0	1/1:14,0:19:15.05:579,15,0	1/1:7,3:10:6.02:236,6,0	1/1:8,3:22:33.11:1209,33,0	./.	./.	./.	./.	1/1:7,8:16:3.01:123,3,0	1/1:1,1:9:3.01:120,3,0	0/0:43,0:43:99:0,108,5411	1/1:6,0:10:3.01:111,3,0	0/1:14,0:13:99:284,0,246	./.	0/1:13,0:16:0:0,0,0	./.	1/1:10,6:14:3.01:107,3,0	./.	1/1:9,9:20:3.01:123,3,0	1/1:9,1:21:39.09:1315,39,0	1/1:5,0:8:9.03:284,9,0	1/1:10,0:13:15.05:494,15,0
chr10	45396873	.	CGCGCGCGCGCGCGCGCGCGTGTGTGTGT	C	4076.30	PASS	AB=1.000;AC=27;AF=0.675;AN=40;BaseQRankSum=7.323;DP=400;FS=2.248;HRun=0;HaplotypeScore=289.6151;InbreedingCoeff=0.2107;MQ=56.07;MQ0=4;MQRankSum=-4.757;QD=17.20;ReadPosRankSum=1.111;VQSLOD=2.3156;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:32,0:33:3:25,3,0	0/1:4,0:4:14.47:69,0,14	0/0:7,0:6:8.99:0,9,170	0/0:11,0:6:11.76:0,12,95	./.	0/1:20,0:20:99:151,0,100	1/1:19,0:19:14.98:138,15,0	1/1:17,0:17:15.05:595,15,0	1/1:3,4:8:6.02:312,6,0	1/1:21,0:22:39.03:690,39,0	./.	./.	./.	./.	0/0:13,0:15:2.48:0,2,36	1/1:9,0:9:3:29,3,0	0/0:50,0:49:99:0,137,11408	1/1:8,0:8:8.94:85,9,0	0/1:13,0:11:99:204,0,109	./.	1/1:14,0:14:5.99:48,6,0	./.	1/1:12,0:12:3.01:113,3,0	./.	0/1:20,0:20:44.77:65,0,45	0/1:20,0:20:99:817,0,102	1/1:4,0:8:9.03:290,9,0	1/1:5,0:8:15.05:446,15,0
chr10	45396877	.	CGCGCGCGCGCGCGCGT	C	5575.49	PASS	AB=0.900;AC=30;AF=0.789;AN=38;BaseQRankSum=8.618;DP=295;FS=16.498;HRun=0;HaplotypeScore=149.0713;InbreedingCoeff=0.4103;MQ=51.74;MQ0=6;MQRankSum=-7.242;QD=34.85;ReadPosRankSum=3.810;VQSLOD=3.0856;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:20,0:20:0:0,0,0	1/1:4,0:4:9.03:210,9,0	0/0:6,0:5:6.02:0,6,100	0/0:7,0:2:6.02:0,6,86	./.	1/1:15,0:15:9.03:249,9,0	1/1:11,0:10:3.01:119,3,0	1/1:5,0:5:15.05:579,15,0	1/1:8,0:8:6.02:236,6,0	1/1:16,0:15:33.11:1274,33,0	./.	./.	./.	./.	1/1:11,0:11:3.01:93,3,0	1/1:8,0:8:3.01:133,3,0	0/0:54,0:52:99:0,139,7544	1/1:4,0:4:3.01:130,3,0	0/1:6,2:6:99:305,0,246	./.	./.	./.	1/1:11,0:9:3.01:121,3,0	./.	1/1:11,1:12:3.01:88,3,0	1/1:14,0:14:9.84:1225,10,0	1/1:7,0:7:9.03:284,9,0	1/1:6,0:6:15.05:529,15,0
chr10	45396943	.	T	TGC	1830.99	PASS	AB=1.000;AC=39;AF=0.696;AN=56;BaseQRankSum=4.934;DP=444;FS=4.051;HRun=0;HaplotypeScore=118.2617;InbreedingCoeff=0.6515;MQ=68.67;MQ0=7;MQRankSum=0.255;QD=5.65;ReadPosRankSum=2.058;VQSLOD=3.2376;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:24:20.49:146,20,0	0/1:4,0:4:0.52:14,0,1	0/0:8,0:8:17.88:0,18,306	0/0:13,0:11:26.94:0,27,289	1/1:24,0:24:22.82:158,23,0	1/1:15,0:14:23.79:192,24,0	1/1:3,19:23:2.96:51,3,0	0/0:23,0:20:57.08:0,57,686	1/1:7,0:7:5.18:40,5,0	1/1:23,0:23:32.83:261,33,0	1/1:10,0:10:11.56:78,12,0	1/1:13,0:13:2.59:21,3,0	1/1:12,0:12:14.39:93,14,0	1/1:13,0:13:0.36:21,0,0	1/1:17,0:17:24.12:189,24,0	1/1:9,0:9:9.25:61,9,0	0/0:40,0:40:99:0,117,1690	1/1:25,0:24:33.24:224,33,0	1/1:12,0:12:8.64:44,9,0	0/0:12,0:11:2.92:0,3,17	1/1:20,0:19:11.61:99,12,0	1/1:17,0:17:6.58:69,7,0	1/1:21,0:21:7.62:49,8,0	1/1:14,0:13:15.38:112,15,0	1/1:19,0:19:1.65:84,2,0	0/0:17,0:17:16.18:0,16,470	0/0:2,0:1:0:0,0,0	0/0:5,0:5:1.79:0,2,5
chr10	45399843	.	T	TGGTATTGGTGTCACA	3944.97	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-2.629;DP=705;FS=3.032;HRun=0;HaplotypeScore=273.4954;InbreedingCoeff=0.9929;MQ=82.25;MQ0=0;MQRankSum=-7.427;QD=64.67;ReadPosRankSum=-1.069;VQSLOD=2.9722;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,99,3899	0/0:9,0:9:24.08:0,24,847	0/0:20,0:20:31.66:0,32,874	0/0:27,0:27:51.15:0,51,1526	0/0:23,0:23:63.20:0,63,1999	1/1:12,10:24:33.11:2287,33,0	1/1:31,2:37:27.09:1658,27,0	0/0:20,0:20:30.09:0,30,1061	0/0:23,0:23:51.17:0,51,1947	0/0:30,0:30:63.21:0,63,2287	0/0:16,0:16:33.11:0,33,1216	0/0:21,0:21:51.17:0,51,1877	0/0:27,0:27:63.19:0,63,2487	0/0:34,0:34:81.28:0,81,2982	0/0:27,0:27:69.24:0,69,2782	0/0:27,0:27:69.24:0,69,2745	0/0:29,0:29:69.24:0,69,2860	0/0:22,0:22:57.20:0,57,2239	0/0:21,0:21:36.09:0,36,1264	0/0:14,0:14:27.09:0,27,973	0/0:63,0:63:99:0,151,5770	0/0:16,0:16:39.13:0,39,1588	0/0:11,0:11:21.07:0,21,866	0/0:36,0:36:90.31:0,90,3618	0/0:27,0:27:57.18:0,57,2291	0/0:32,0:32:78.26:0,78,2689	0/0:25,0:25:54.19:0,54,2194	0/0:8,0:8:21.07:0,21,869
chr10	45400001	.	TTGTG	T	946.07	PASS	AB=0.833;AC=19;AF=0.365;AN=52;BaseQRankSum=1.961;DP=701;FS=12.083;HRun=0;HaplotypeScore=144.6171;InbreedingCoeff=0.5217;MQ=64.39;MQ0=13;MQRankSum=-0.638;QD=3.49;ReadPosRankSum=-0.135;VQSLOD=1.7637;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:37:27.55:0,28,435	0/0:7,0:9:2.74:0,3,12	./.	./.	1/1:17,3:20:15.50:209,16,0	0/1:18,3:22:77.79:78,0,100	0/1:28,1:32:15.89:38,0,16	0/1:14,0:16:0:0,0,0	0/0:21,0:21:15.05:0,15,257	1/1:23,10:33:17.42:228,17,0	1/1:13,4:18:4.26:50,4,0	0/0:18,0:18:12.04:0,12,218	0/0:30,0:30:27.54:0,28,392	0/0:24,0:22:27.07:0,27,429	1/1:11,0:16:9.01:84,9,0	1/1:19,5:24:3.01:46,3,0	0/0:28,0:30:29.84:0,30,559	0/1:17,6:24:0.39:127,0,0	0/0:23,0:23:3.01:0,3,70	0/0:12,0:12:15.02:0,15,225	0/0:60,0:60:53.27:0,53,864	0/0:18,0:15:12.04:0,12,217	0/0:14,0:14:12.04:0,12,208	0/0:41,0:37:32.50:0,32,532	1/1:20,6:26:6.02:93,6,0	1/1:25,0:29:9.01:84,9,0	0/0:18,0:18:27.47:0,27,411	0/1:7,3:10:80.42:80,0,96
chr10	45400032	.	T	TGT	922.45	PASS	AB=1.000;AC=19;AF=0.365;AN=52;BaseQRankSum=-1.067;DP=689;FS=14.164;HRun=0;HaplotypeScore=118.1525;InbreedingCoeff=0.6434;MQ=52.21;MQ0=27;MQRankSum=1.279;QD=3.26;ReadPosRankSum=-3.255;VQSLOD=0.6454;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:34,0:31:21.48:210,21,0	0/0:11,0:11:2.84:0,3,14	./.	0/0:43,0:15:2.50:0,2,9	0/0:19,0:19:11.74:0,12,55	0/0:25,0:25:11.53:0,12,74	0/0:30,0:30:8.52:0,9,42	./.	1/1:11,4:18:10.25:91,10,0	0/0:33,0:32:9.50:0,9,38	0/0:15,0:15:2.84:0,3,14	1/1:16,0:15:8.78:74,9,0	1/1:33,0:32:17.80:155,18,0	1/1:24,0:22:17.78:163,18,0	0/0:17,0:17:8.52:0,9,42	0/0:25,0:25:2.84:0,3,14	0/0:29,0:28:20.88:0,21,204	0/0:33,0:32:11.36:0,11,56	1/1:11,0:11:3.31:15,3,0	0/0:14,0:14:5.55:0,6,44	0/1:69,0:66:16.19:16,0,28	1/1:15,0:13:5.99:50,6,0	1/1:15,0:15:9:84,9,0	1/1:48,0:44:28.93:245,29,0	0/0:20,0:20:5.68:0,6,28	0/0:11,0:9:8.52:0,9,42	0/0:23,0:23:11.73:0,12,106	0/0:6,0:6:8.69:0,9,60
chr10	45400411	.	CA	C	143.11	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.625;DP=625;FS=0.000;HRun=2;HaplotypeScore=62.0066;InbreedingCoeff=0.9872;MQ=82.01;MQ0=0;MQRankSum=-0.504;QD=23.85;ReadPosRankSum=-0.389;VQSLOD=3.2526;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:81.26:0,81,1188	1/1:0,6:6:18.06:234,18,0	0/0:21,0:21:59.22:0,59,838	0/0:18,0:18:29.24:0,29,579	0/0:19,0:19:54.18:0,54,808	0/0:22,0:22:66.22:0,66,980	0/0:24,0:24:72.22:0,72,1040	0/0:35,0:35:99:0,105,1541	0/0:30,0:30:90.30:0,90,1338	0/0:28,0:28:81.27:0,81,1170	0/0:14,0:14:39.12:0,39,564	0/0:22,0:22:66.22:0,66,989	0/0:18,0:18:51.17:0,51,764	0/0:25,0:25:75.25:0,75,1122	0/0:22,0:21:66.22:0,66,976	0/0:14,0:14:42.14:0,42,630	0/0:28,0:28:84.26:0,84,1217	0/0:30,0:30:84.17:0,84,1164	0/0:21,0:21:63.21:0,63,929	0/0:17,0:17:51.17:0,51,762	0/0:35,0:34:99:0,102,1494	0/0:24,0:24:69.21:0,69,981	0/0:15,0:15:39.13:0,39,573	0/0:30,0:30:87.29:0,87,1288	0/0:20,0:20:51.12:0,51,715	0/0:24,0:24:66.22:0,66,973	0/0:26,0:26:78.26:0,78,1163	0/0:7,0:7:21.07:0,21,314
chr10	45400938	.	T	TTG	1635.41	PASS	AB=0.893;AC=20;AF=0.357;AN=56;BaseQRankSum=1.707;DP=522;FS=6.767;HRun=0;HaplotypeScore=185.0458;InbreedingCoeff=0.2879;MQ=57.37;MQ0=12;MQRankSum=-2.169;QD=6.06;ReadPosRankSum=-1.101;VQSLOD=2.2504;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:24:7.37:0,7,47	0/1:7,0:11:4.46:4,0,9	0/1:38,0:16:2.41:2,0,125	0/0:30,0:19:15.76:0,16,147	0/1:6,9:15:27.49:86,0,27	0/0:22,0:22:29.80:0,30,247	0/0:12,0:11:1.92:0,2,26	0/0:23,0:23:44.86:0,45,498	0/0:18,0:17:1.24:0,1,11	0/1:17,5:22:16.89:438,0,17	1/1:9,6:15:2.52:123,3,0	0/1:12,0:13:8.51:9,0,12	0/1:15,0:14:9.61:13,0,10	0/1:15,0:16:0.39:20,0,0	1/1:14,3:16:24.08:357,24,0	1/1:11,8:18:24.80:315,25,0	0/0:20,0:19:44.52:0,45,503	1/1:6,10:16:18.50:262,18,0	0/0:9,0:9:9.03:0,9,108	0/0:4,0:4:2.75:0,3,17	0/0:28,0:27:33.06:0,33,375	1/1:21,0:21:0.57:2,1,0	0/0:18,0:18:0.62:0,1,2	0/0:11,0:12:0.47:0,0,1	1/1:7,10:17:9.02:144,9,0	0/1:32,0:32:22.79:23,0,405	0/0:19,0:19:12.05:0,12,367	0/0:12,0:12:20.77:0,21,315
chr10	45400968	.	GTA	G	501.93	PASS	AB=0.979;AC=24;AF=0.500;AN=48;BaseQRankSum=5.674;DP=488;FS=36.553;HRun=0;HaplotypeScore=112.7997;InbreedingCoeff=0.1811;MQ=32.24;MQ0=27;MQRankSum=-2.395;QD=1.86;ReadPosRankSum=-1.171;VQSLOD=0.2055;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:17,0:17:12.70:18,0,13	1/1:10,0:9:5.52:27,6,0	./.	0/0:43,0:4:8.95:0,9,83	0/0:14,1:15:5.53:0,6,104	./.	./.	0/0:21,0:21:43.15:0,43,447	1/1:14,0:13:5.83:45,6,0	0/1:17,0:17:23.46:23,0,286	0/1:14,0:14:15.92:16,0,105	1/1:16,1:16:5.79:42,6,0	1/1:16,0:15:14.02:61,14,0	1/1:14,0:13:3.74:26,4,0	0/0:19,0:18:9.03:0,9,160	0/1:19,2:20:4.51:5,0,209	0/0:13,0:13:33.02:0,33,489	0/0:14,0:14:11.32:0,11,257	0/1:13,0:7:25.79:26,0,195	./.	0/0:23,0:17:0.03:0,0,420	1/1:19,0:19:8.97:74,9,0	1/1:14,0:13:8.98:73,9,0	1/1:9,0:8:2.99:24,3,0	0/0:17,3:19:8.62:0,9,114	0/1:36,0:35:99:166,0,371	0/1:28,0:28:33.50:33,0,466	0/1:10,1:11:0.08:0,0,245
chr10	45400983	.	AGT	A	790	PASS	AB=0.944;AC=14;AF=0.333;AN=42;BaseQRankSum=-1.728;DP=369;FS=5.493;HRun=0;HaplotypeScore=83.7953;InbreedingCoeff=0.3498;MQ=29.53;MQ0=29;MQRankSum=-1.223;QD=6.32;ReadPosRankSum=0.411;VQSLOD=2.6376;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	1/1:3,1:4:3.01:37,3,0	0/0:39,0:1:3.01:0,3,49	0/0:40,0:3:3.01:0,3,49	./.	./.	./.	1/1:7,11:18:28.79:396,29,0	0/0:6,0:6:0:0,0,0	1/1:12,0:12:16.09:89,16,0	0/1:10,0:10:0:0,0,0	0/0:13,0:12:1.24:0,1,3	0/0:9,0:8:4.59:0,5,16	0/0:13,0:12:0:0,0,0	0/0:10,1:10:0:0,0,0	1/1:18,0:17:1.62:17,2,0	0/0:11,0:11:3.01:0,3,49	1/1:9,0:7:11.39:68,11,0	0/0:12,0:8:10.21:0,10,114	./.	0/0:22,0:15:17.99:0,18,192	0/1:16,0:16:0:0,0,0	./.	./.	0/0:10,0:10:0:0,0,0	0/1:22,9:30:17.03:285,0,17	0/0:21,0:21:4.19:0,4,260	0/1:7,0:7:17.07:17,0,24
chr10	45400995	.	TGTGTGC	T	571.93	PASS	AB=0.848;AC=8;AF=0.200;AN=40;BaseQRankSum=-2.571;DP=286;FS=7.769;HRun=0;HaplotypeScore=80.7734;InbreedingCoeff=0.4361;MQ=28.06;MQ0=21;MQRankSum=-1.359;QD=9.22;ReadPosRankSum=-0.423;VQSLOD=0.4738;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:2,0:2:2.98:0,3,22	0/0:25,0:1:3.01:0,3,85	0/0:27,0:1:3.01:0,3,95	./.	./.	./.	0/0:16,0:16:28.93:0,29,354	0/0:6,0:5:0:0,0,0	1/1:3,8:11:16.23:422,16,0	0/0:2,5:7:0:0,0,0	0/0:10,0:9:1.25:0,1,3	0/0:7,0:7:1.94:0,2,8	./.	0/1:4,5:8:0:0,0,0	0/0:12,1:12:7.22:0,7,93	0/0:8,0:8:2.91:0,3,107	1/1:5,4:7:13.86:249,14,0	0/1:11,0:8:5.01:5,0,127	./.	0/0:19,0:13:20.93:0,21,266	0/1:13,0:13:0:0,0,0	./.	./.	0/1:6,3:9:0.02:0,0,0	0/0:25,0:25:39.19:0,39,462	0/0:19,0:19:34:0,34,498	0/0:5,0:5:8.98:0,9,103
chr10	45401004	.	GCA	G	203.92	PASS	AB=0.950;AC=8;AF=0.267;AN=30;BaseQRankSum=2.855;DP=167;FS=0.000;HRun=0;HaplotypeScore=45.3415;InbreedingCoeff=0.0732;MQ=26.62;MQ0=11;MQRankSum=-0.554;QD=4.74;ReadPosRankSum=1.129;VQSLOD=1.9106;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	0/0:1,0:1:2.90:0,3,16	0/0:19,0:1:3.01:0,3,61	0/0:19,0:1:2.84:0,3,14	./.	./.	./.	0/0:11,1:12:0.40:0,0,358	./.	0/1:8,0:8:4.94:9,0,5	./.	./.	1/1:0,1:1:3:29,3,0	./.	./.	1/1:5,0:5:5.04:57,5,0	0/0:5,0:5:0.91:0,1,58	0/1:8,0:6:21.50:33,0,22	0/0:8,0:6:2.69:0,3,165	./.	0/0:13,0:9:6.01:0,6,115	./.	./.	./.	0/1:5,0:5:0:0,0,0	0/1:12,4:16:99:172,0,295	0/0:11,1:12:26.68:0,27,411	0/0:2,0:2:5.75:0,6,50
chr10	45402052	.	GT	G	9142.43	PASS	AB=0.806;AC=54;AF=0.964;AN=56;BaseQRankSum=0.877;DP=326;FS=67.979;HRun=4;HaplotypeScore=197.3505;InbreedingCoeff=-0.0336;MQ=46.62;MQ0=1;MQRankSum=-1.674;QD=28.04;ReadPosRankSum=2.439;VQSLOD=-0.1180;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,12:15:29.68:326,30,0	1/1:1,7:9:24.06:272,24,0	0/1:5,2:7:27.33:52,0,27	0/1:4,1:4:3.54:31,0,4	1/1:2,13:15:30.08:345,30,0	1/1:1,10:11:30.09:350,30,0	1/1:2,14:15:39.12:459,39,0	1/1:6,10:16:35.28:381,35,0	1/1:1,11:12:33.10:387,33,0	1/1:1,13:14:39.12:464,39,0	1/1:1,9:10:24.06:274,24,0	1/1:0,7:7:21.06:248,21,0	1/1:0,7:7:21.06:251,21,0	1/1:2,14:16:42.13:497,42,0	1/1:0,14:14:42.09:482,42,0	1/1:1,12:13:39.08:444,39,0	1/1:2,8:10:23.74:260,24,0	1/1:2,6:7:12.04:142,12,0	1/1:2,11:12:33.04:364,33,0	1/1:1,12:13:36.11:424,36,0	1/1:1,8:9:17.79:205,18,0	1/1:0,19:19:48.14:566,48,0	1/1:0,7:7:21.06:250,21,0	1/1:3,6:9:14.73:171,15,0	1/1:2,7:9:21.06:251,21,0	1/1:3,16:19:48.14:560,48,0	1/1:2,11:13:36.05:402,36,0	1/1:2,8:10:24.07:284,24,0
chr10	45402068	.	G	GT	2569.18	PASS	AB=1.000;AC=53;AF=0.946;AN=56;BaseQRankSum=1.777;DP=302;FS=27.269;HRun=0;HaplotypeScore=223.5684;InbreedingCoeff=0.3157;MQ=43.16;MQ0=1;MQRankSum=-0.609;QD=8.65;ReadPosRankSum=1.953;VQSLOD=1.9645;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:14:15.61:71,16,0	1/1:7,1:8:10.68:54,11,0	0/1:5,0:5:31.16:31,0,45	0/0:5,0:3:3.17:0,3,9	1/1:13,0:13:28.98:150,29,0	1/1:13,0:13:25.98:107,26,0	1/1:12,2:13:33.52:174,34,0	1/1:13,1:14:33.24:172,33,0	1/1:10,0:10:25.31:94,25,0	1/1:12,0:12:3.03:95,3,0	1/1:10,0:10:23.11:92,23,0	1/1:7,0:7:17.88:67,18,0	1/1:7,0:7:18.17:69,18,0	1/1:16,0:16:35.94:145,36,0	1/1:16,0:16:39.88:154,40,0	1/1:12,1:13:34.24:144,34,0	1/1:9,0:9:21:95,21,0	1/1:4,0:3:5.42:22,5,0	1/1:10,0:10:27.58:135,28,0	1/1:14,0:14:28.85:106,29,0	1/1:8,0:8:12.32:45,12,0	1/1:21,0:21:41.27:160,41,0	1/1:8,0:8:19.49:71,19,0	1/1:7,1:8:9.20:41,9,0	1/1:9,0:9:21.31:91,21,0	1/1:15,0:15:32.17:133,32,0	1/1:11,0:11:25.39:97,25,0	1/1:8,0:8:13.36:54,13,0
chr10	45402077	.	GGT	G	7451.18	PASS	AB=0.563;AC=51;AF=0.911;AN=56;BaseQRankSum=2.340;DP=275;FS=77.033;HRun=0;HaplotypeScore=170.9953;InbreedingCoeff=0.6092;MQ=44.32;MQ0=0;MQRankSum=-1.994;QD=28.01;ReadPosRankSum=3.410;VQSLOD=2.1862;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,10:15:10.41:172,10,0	1/1:0,8:8:24.05:248,24,0	0/0:5,0:5:8.24:0,8,128	0/0:4,0:3:7.27:0,7,105	1/1:0,12:12:33.06:428,33,0	1/1:0,12:12:33.08:350,33,0	1/1:1,10:10:23.11:259,23,0	1/1:2,9:11:25.18:334,25,0	1/1:1,9:10:27.05:284,27,0	1/1:2,9:11:29.82:308,30,0	1/1:1,8:9:27:252,27,0	1/1:0,5:5:15.04:173,15,0	1/1:0,5:5:15.04:192,15,0	1/1:1,15:16:45.03:479,45,0	1/1:0,14:14:42.11:458,42,0	1/1:0,13:13:36.09:380,36,0	1/1:3,6:9:16.72:188,17,0	1/1:1,3:3:6.02:68,6,0	1/1:0,7:7:21.06:260,21,0	1/1:0,14:14:41.98:441,42,0	1/1:0,5:5:9.03:127,9,0	1/1:2,18:20:54.04:565,54,0	1/1:1,8:9:26.77:244,27,0	1/1:0,8:8:11.82:132,12,0	0/1:2,7:9:19.40:197,0,19	1/1:0,14:14:39.11:427,39,0	1/1:2,8:10:29.98:314,30,0	1/1:0,5:5:15.04:170,15,0
chr10	45402084	.	G	GT	4957.55	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=0.763;DP=269;FS=61.571;HRun=5;HaplotypeScore=170.0220;InbreedingCoeff=0.5885;MQ=38.92;MQ0=0;MQRankSum=-1.715;QD=18.92;ReadPosRankSum=2.643;VQSLOD=0.3413;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,6:13:17.60:179,18,0	1/1:0,8:8:23.91:187,24,0	0/0:3,0:3:2.98:0,3,22	0/0:4,0:3:6.88:0,7,55	1/1:1,11:12:11.95:92,12,0	1/1:0,13:13:35.94:302,36,0	1/1:2,9:10:25.96:196,26,0	1/1:4,7:11:26.96:229,27,0	1/1:1,9:10:29.95:252,30,0	1/1:2,8:10:22.56:200,23,0	1/1:2,7:9:20.90:158,21,0	1/1:1,4:5:11.97:95,12,0	1/1:2,3:5:8.98:72,9,0	1/1:1,15:16:41.60:326,42,0	1/1:0,14:14:38.91:311,39,0	1/1:0,14:14:35.92:288,36,0	1/1:4,3:7:8.98:73,9,0	1/1:1,3:3:6:53,6,0	1/1:1,7:8:21.02:197,21,0	1/1:1,13:14:38.41:297,38,0	1/1:0,5:5:2.99:24,3,0	1/1:1,17:18:41.81:324,42,0	1/1:1,8:9:23.42:171,23,0	1/1:0,8:8:2.98:22,3,0	1/1:2,7:9:23.96:203,24,0	1/1:0,15:15:41.97:364,42,0	1/1:1,8:9:23.98:212,24,0	1/1:0,5:5:15:132,15,0
chr10	45402093	.	G	GA	1874.95	PASS	AC=20;AF=0.909;AN=22;BaseQRankSum=0.500;DP=238;FS=0.000;HRun=1;HaplotypeScore=160.6083;InbreedingCoeff=0.1888;MQ=32.80;MQ0=0;MQRankSum=1.655;QD=23.73;ReadPosRankSum=1.655;VQSLOD=3.5536;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	1/1:1,7:8:3.01:44,3,0	./.	0/0:2,0:2:0.89:0,1,2	./.	./.	./.	1/1:1,8:9:27.09:404,27,0	./.	1/1:0,8:8:24.08:359,24,0	./.	./.	./.	./.	./.	1/1:1,13:14:3.01:44,3,0	1/1:1,3:4:3.01:44,3,0	1/1:1,2:2:6:67,6,0	1/1:0,6:6:18.06:269,18,0	./.	./.	./.	./.	./.	./.	1/1:1,13:14:36.12:537,36,0	1/1:0,8:8:9.03:135,9,0	1/1:0,5:5:3.01:45,3,0
chr10	45402859	.	A	AG	173.15	PASS	AB=0.706;AC=3;AF=0.054;AN=56;BaseQRankSum=-0.834;DP=373;FS=4.834;HRun=0;HaplotypeScore=72.9843;InbreedingCoeff=0.5199;MQ=42.36;MQ0=35;MQRankSum=-1.319;QD=7.87;ReadPosRankSum=2.393;VQSLOD=3.3159;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:21:56.64:0,57,477	0/0:7,0:6:6:0,6,53	0/0:7,0:3:5.91:0,6,45	0/0:3,0:2:5.49:0,5,35	0/0:16,0:15:31.51:0,32,253	1/1:4,6:9:20.94:165,21,0	0/1:7,5:10:1.79:112,0,2	0/0:20,0:20:9.18:0,9,250	0/0:13,0:13:36.13:0,36,301	0/0:21,0:21:60.11:0,60,479	0/0:11,0:10:20.84:0,21,158	0/0:11,0:10:23.81:0,24,197	0/0:8,0:5:14.90:0,15,120	0/0:14,0:14:35.68:0,36,263	0/0:12,0:11:27.22:0,27,193	0/0:12,0:10:16.27:0,16,130	0/0:28,0:22:52.55:0,53,600	0/0:15,1:13:33.50:0,33,228	0/0:21,0:18:40.46:0,40,269	0/0:8,1:9:17.84:0,18,126	0/0:10,0:8:2.59:0,3,61	0/0:8,0:8:23.88:0,24,212	0/0:6,0:6:14.97:0,15,134	0/0:13,0:10:5.13:0,5,133	0/0:14,0:12:30.20:0,30,211	0/0:20,0:20:56.78:0,57,465	0/0:17,0:15:20.79:0,21,147	0/0:10,0:6:9.45:0,9,73
chr10	45402860	.	AAG	A	3666.54	PASS	AB=1.000;AC=37;AF=0.661;AN=56;BaseQRankSum=-2.002;DP=375;FS=15.333;HRun=0;HaplotypeScore=65.2670;InbreedingCoeff=0.3451;MQ=42.71;MQ0=33;MQRankSum=-0.667;QD=11.98;ReadPosRankSum=-3.197;VQSLOD=1.1681;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:21:40.38:40,0,61	1/1:6,1:6:5.64:27,6,0	0/0:8,0:4:8.99:0,9,80	0/0:3,0:2:4.56:0,5,42	1/1:15,0:14:29.84:272,30,0	0/0:10,0:9:21.01:0,21,189	0/0:13,0:11:22.80:0,23,201	1/1:3,17:20:48.39:523,48,0	0/1:13,0:13:44.25:44,0,61	1/1:21,0:21:21.45:374,21,0	1/1:11,0:10:12.49:112,12,0	0/1:11,0:10:22.57:43,0,23	0/0:8,0:5:1.31:0,1,10	0/1:14,0:14:23.21:34,0,23	1/1:12,0:11:20.92:223,21,0	1/1:12,0:10:20.79:176,21,0	0/0:27,0:22:53.28:0,53,682	1/1:17,0:14:29.95:269,30,0	1/1:20,1:18:37.45:224,37,0	1/1:9,0:9:8.96:68,9,0	1/1:9,1:8:11.95:95,12,0	0/1:9,0:9:8.76:79,0,9	0/1:6,0:6:7.77:68,0,8	0/1:12,0:10:19.52:20,0,48	1/1:14,0:12:24.85:216,25,0	1/1:7,14:20:47.80:553,48,0	1/1:16,0:15:17.91:136,18,0	1/1:11,0:7:8.97:70,9,0
chr10	45402861	.	AG	A	3838.51	PASS	AB=1.000;AC=45;AF=0.804;AN=56;BaseQRankSum=-1.642;DP=346;FS=23.702;HRun=1;HaplotypeScore=56.8560;InbreedingCoeff=0.7722;MQ=44.38;MQ0=27;MQRankSum=-1.217;QD=13.56;ReadPosRankSum=-3.926;VQSLOD=0.4551;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:18,2:18:17.10:206,17,0	1/1:2,4:5:6.02:83,6,0	0/0:8,1:5:11.79:0,12,114	0/0:3,0:2:4.25:0,4,35	1/1:8,7:14:38.73:274,39,0	0/0:11,0:10:20.95:0,21,169	0/0:13,0:11:17.06:0,17,148	1/1:18,1:19:45.66:306,46,0	1/1:11,1:12:10.74:123,11,0	1/1:12,7:19:41.17:336,41,0	1/1:8,3:10:12.92:102,13,0	1/1:8,1:8:11.01:67,11,0	1/1:9,0:6:13.28:90,13,0	1/1:11,0:11:13.27:107,13,0	1/1:4,7:10:21.75:160,22,0	1/1:7,5:10:24.69:194,25,0	0/0:27,0:22:42.12:0,42,516	1/1:11,5:14:32.80:242,33,0	1/1:2,0:15:44.25:404,44,0	1/1:5,0:7:9.41:66,9,0	1/1:3,0:7:11.30:72,11,0	1/1:6,1:7:15.88:141,16,0	1/1:5,0:5:5.45:74,5,0	0/1:12,0:11:2.46:53,0,2	1/1:4,9:12:30.26:224,30,0	1/1:16,2:17:47.22:328,47,0	1/1:2,0:14:17.73:121,18,0	1/1:1,0:7:9.42:67,9,0
chr10	45402863	.	AAG	A	1821.71	PASS	AB=1.000;AC=26;AF=0.464;AN=56;BaseQRankSum=1.626;DP=356;FS=4.211;HRun=0;HaplotypeScore=69.3748;InbreedingCoeff=0.7710;MQ=44.72;MQ0=27;MQRankSum=-2.711;QD=9.64;ReadPosRankSum=-0.970;VQSLOD=2.5697;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:21:38.56:0,39,504	0/0:6,0:5:6.01:0,6,63	0/0:9,0:5:12.03:0,12,230	0/0:3,0:2:5.75:0,6,69	1/1:15,0:14:29.15:265,29,0	0/0:12,0:11:27.09:0,27,468	0/1:13,0:11:1.13:1,0,401	0/0:19,0:19:28.89:0,29,155	0/0:13,0:13:21.36:0,21,331	1/1:19,1:20:14.25:341,14,0	1/1:11,0:10:11.98:110,12,0	0/0:9,0:8:11.06:0,11,124	0/0:9,0:6:5.54:0,6,58	0/0:11,0:11:14.09:0,14,145	1/1:11,1:11:21.81:226,22,0	1/1:13,0:11:21.07:176,21,0	0/0:28,0:23:49.98:0,50,898	1/1:15,2:14:29.94:267,30,0	1/1:17,0:15:10.65:106,11,0	1/1:7,0:7:8.89:61,9,0	1/1:9,0:7:3.23:58,3,0	0/0:7,0:7:15.86:0,16,164	0/0:5,0:5:10.80:0,11,86	0/0:13,0:12:20.69:0,21,286	1/1:10,3:12:23.90:214,24,0	0/1:18,0:17:11.81:12,0,102	1/1:15,0:14:17.84:128,18,0	1/1:9,0:7:8.95:68,9,0
chr10	45402864	.	AG	A	1578.72	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=2.969;DP=334;FS=7.938;HRun=1;HaplotypeScore=61.4475;InbreedingCoeff=0.8482;MQ=47.89;MQ0=25;MQRankSum=-2.517;QD=10.96;ReadPosRankSum=-1.533;VQSLOD=0.6158;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:20:20.34:0,20,376	0/0:6,0:5:5.17:0,5,19	0/0:9,0:5:12.03:0,12,192	0/0:4,0:3:8.86:0,9,102	1/1:6,6:11:28.28:204,28,0	0/0:12,0:11:27.08:0,27,394	0/0:13,0:11:18.01:0,18,347	0/0:19,0:19:46.87:0,47,330	0/0:12,0:12:23.37:0,23,257	1/1:12,6:18:33.52:294,34,0	1/1:6,3:8:11.97:98,12,0	0/0:5,1:5:11.85:0,12,93	0/0:5,0:2:5.95:0,6,55	0/0:11,0:11:17.50:0,18,161	1/1:7,6:12:29.74:221,30,0	1/1:6,4:8:23.51:197,24,0	0/0:28,0:23:50.38:0,50,749	1/1:12,3:12:29.81:225,30,0	1/1:17,0:15:10.33:123,10,0	1/1:6,0:6:8.81:53,9,0	0/1:9,0:7:8.27:44,0,8	0/0:8,0:8:18.57:0,19,163	0/0:5,0:5:11.78:0,12,95	0/0:10,0:10:20.75:0,21,243	1/1:5,6:11:23.82:177,24,0	0/0:19,1:19:25.25:0,25,304	1/1:15,0:14:17.45:101,17,0	1/1:9,0:7:9.30:55,9,0
chr10	45404183	.	C	CT	1531.53	PASS	AB=0.929;AC=15;AF=0.300;AN=50;BaseQRankSum=-5.512;DP=411;FS=230.363;HRun=0;HaplotypeScore=70.0171;InbreedingCoeff=-0.1323;MQ=56.90;MQ0=8;MQRankSum=-0.540;QD=5.89;ReadPosRankSum=-7.520;VQSLOD=-0.4285;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:4:0:0,0,0	0/0:10,0:10:26.70:0,27,272	0/0:3,0:2:3.01:0,3,42	0/0:12,0:4:9.01:0,9,96	0/1:14,0:14:23.83:83,0,24	0/1:9,0:9:28.56:41,0,29	0/0:24,15:39:9.58:0,10,169	0/0:10,0:10:20.99:0,21,241	./.	0/1:23,2:22:26.89:302,0,27	0/1:10,1:11:8.94:9,0,23	0/0:5,0:6:1.25:0,1,3	0/0:2,0:3:0:0,0,0	0/0:5,0:4:5.88:0,6,48	0/1:13,0:13:2.99:128,0,3	0/1:10,1:11:21.74:66,0,22	0/0:32,0:32:86.84:0,87,983	0/1:53,0:50:99:221,0,125	0/1:11,2:10:1.93:118,0,2	0/1:11,0:11:46.50:57,0,46	0/1:55,3:55:99:327,0,189	0/1:0,0:5:0.02:0,0,0	./.	./.	0/1:13,0:13:18.24:75,0,18	0/0:26,0:26:42.26:0,42,622	0/1:15,0:13:16.92:107,0,17	1/1:9,0:9:7.58:132,8,0
chr10	45404552	.	C	CT	11820.69	PASS	AC=28;AF=0.700;AN=40;BaseQRankSum=13.484;DP=446;FS=0.806;HRun=2;HaplotypeScore=127.6751;InbreedingCoeff=0.9987;MQ=92.91;MQ0=0;MQRankSum=-4.722;QD=38.76;ReadPosRankSum=4.244;VQSLOD=4.1518;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	0/0:14,0:14:42.13:0,42,520	0/0:20,0:20:48.07:0,48,537	0/0:21,0:21:26.69:0,27,426	1/1:0,23:23:69.19:955,69,0	1/1:1,20:21:60.17:819,60,0	1/1:0,23:23:66.22:928,66,0	0/0:25,0:24:72.20:0,72,860	./.	1/1:0,29:29:87.27:1187,87,0	1/1:1,16:17:42.14:593,42,0	./.	./.	./.	1/1:2,24:26:72.24:1016,72,0	1/1:0,11:11:30.10:422,30,0	0/0:36,0:36:99:0,105,1276	1/1:0,20:20:57.19:803,57,0	1/1:1,18:18:51.16:697,51,0	1/1:0,21:21:60.16:822,60,0	1/1:2,31:33:84.28:1181,84,0	./.	./.	./.	1/1:1,17:18:51.17:706,51,0	0/0:25,0:25:66.19:0,66,803	1/1:0,36:36:99:1395,99,0	1/1:0,8:8:21.07:297,21,0
chr10	45408014	.	A	AGTGT	830.74	PASS	AB=1.000;AC=28;AF=0.778;AN=36;BaseQRankSum=-2.364;DP=179;FS=10.002;HRun=0;HaplotypeScore=228.3664;InbreedingCoeff=0.1135;MQ=30.19;MQ0=7;MQRankSum=0.499;QD=4.69;ReadPosRankSum=0.224;VQSLOD=1.1615;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:2,0:2:3.63:0,4,10	./.	./.	1/1:2,3:6:0.89:2,1,0	0/1:10,0:8:0.35:14,0,0	0/1:14,0:14:3.74:25,0,4	1/1:12,0:9:6.44:47,6,0	./.	1/1:11,0:11:18.22:199,18,0	0/1:9,0:8:0.18:2,0,0	./.	./.	./.	1/1:12,0:12:2.06:65,2,0	1/1:13,0:13:5.90:35,6,0	0/1:14,0:12:12.07:12,0,20	1/1:4,0:4:5.60:39,6,0	0/1:12,0:12:3.51:75,0,4	1/1:4,0:4:4.48:14,4,0	1/1:10,0:8:8.66:70,9,0	./.	./.	./.	0/1:12,0:12:1.84:2,0,5	1/1:7,0:6:3.26:57,3,0	1/1:14,0:14:20.72:160,21,0	1/1:12,0:12:8.70:110,9,0
chr10	45408207	.	GATCAGTGCAC	G	1631.98	PASS	AB=0.593;AC=3;AF=0.075;AN=40;BaseQRankSum=7.080;DP=443;FS=17.191;HRun=0;HaplotypeScore=215.1642;InbreedingCoeff=0.6344;MQ=92.49;MQ0=0;MQRankSum=-2.156;QD=46.63;ReadPosRankSum=-2.936;VQSLOD=1.1062;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/0:14,0:14:33.11:0,33,1678	0/0:19,0:19:28.51:0,29,1002	0/0:27,0:28:26.34:0,26,1329	0/0:17,0:17:42.14:0,42,2049	0/0:20,0:19:48.16:0,48,2446	0/0:29,0:29:69.24:0,69,3306	1/1:5,14:19:42.12:983,42,0	./.	0/0:25,0:25:51.17:0,51,2570	0/0:17,0:17:45.15:0,45,2007	./.	./.	./.	0/0:22,0:22:48.16:0,48,2355	0/0:15,0:15:30.10:0,30,1530	0/0:43,0:43:99:0,108,5257	0/0:20,0:20:48.16:0,48,2368	0/0:21,0:21:36.12:0,36,1738	0/0:18,0:18:45.15:0,45,2122	0/0:44,0:44:99:0,108,5457	./.	./.	./.	0/0:15,0:15:45.15:0,45,2125	0/1:5,11:16:99:751,0,267	0/0:34,0:33:87.30:0,87,4222	0/0:7,0:7:18.06:0,18,904
chr10	45409714	.	TAC	T	625.75	PASS	AB=0.992;AC=22;AF=0.440;AN=50;BaseQRankSum=1.525;DP=1318;FS=1.453;HRun=0;HaplotypeScore=197.9261;InbreedingCoeff=0.0034;MQ=44.32;MQ0=99;MQRankSum=1.322;QD=0.71;ReadPosRankSum=1.923;VQSLOD=2.8530;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:70,0:56:5.62:0,6,57	0/0:13,0:10:3.71:0,4,59	./.	./.	./.	1/1:30,0:27:6.01:63,6,0	1/1:41,2:29:17.78:174,18,0	0/0:44,0:30:0:0,0,0	0/1:47,0:37:13.64:19,0,14	0/1:59,0:46:31.42:31,0,439	0/0:23,0:21:3.01:0,3,44	1/1:67,0:53:3.05:20,3,0	0/1:59,0:42:16.78:17,0,36	0/1:44,0:31:5.91:6,0,14	1/1:49,4:40:8.99:97,9,0	0/0:53,0:45:3.89:0,4,46	0/1:63,0:52:7.90:8,0,505	0/0:37,0:29:19.58:0,20,235	0/0:20,0:11:4.28:0,4,26	1/1:32,0:30:2.97:20,3,0	0/1:149,2:111:31.92:111,0,32	0/1:27,0:22:26.32:26,0,42	0/1:25,0:20:8.56:9,0,29	1/1:77,0:53:12.52:71,13,0	0/0:46,0:37:6.02:0,6,90	0/1:57,1:41:9.27:9,0,143	0/1:37,2:32:29.50:97,0,29	0/0:16,0:12:11.58:0,12,72
chr10	45409738	.	C	CAT	623.85	PASS	AB=0.992;AC=9;AF=0.173;AN=52;BaseQRankSum=1.460;DP=2075;FS=13.952;HRun=0;HaplotypeScore=258.4672;InbreedingCoeff=0.1941;MQ=25.29;MQ0=360;MQRankSum=-0.305;QD=1.07;ReadPosRankSum=1.879;VQSLOD=1.1332;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:100,0:60:14.69:0,15,152	0/0:32,0:19:20.39:0,20,170	0/0:19,0:3:5.94:0,6,41	./.	./.	0/0:57,0:45:8.93:0,9,75	0/0:75,0:27:21.82:0,22,129	0/0:93,0:35:43.96:0,44,507	0/0:78,0:47:35.31:0,35,250	0/1:103,0:67:21.44:21,0,976	0/0:33,0:27:6.01:0,6,70	0/0:97,0:63:22.24:0,22,146	0/0:88,1:49:6.06:0,6,255	0/0:69,0:38:8.77:0,9,42	0/0:90,0:50:7.28:0,7,90	0/0:90,0:60:2.84:0,3,115	0/0:92,0:63:82.71:0,83,837	0/0:77,0:49:53.73:0,54,438	0/1:45,0:17:61.43:61,0,63	1/1:47,4:46:3.86:59,4,0	0/1:239,3:132:20.96:258,0,21	0/1:44,0:33:1.10:1,0,110	0/0:46,0:35:15.17:0,15,133	0/0:122,0:69:27.88:0,28,211	0/0:83,0:64:14.78:0,15,156	0/0:75,0:44:99:0,111,832	1/1:55,7:43:12.50:299,12,0	0/1:33,1:19:56.11:56,0,127
chr10	45409750	.	C	CAT	630.28	PASS	AB=0.979;AC=15;AF=0.300;AN=50;BaseQRankSum=2.263;DP=2234;DS;FS=2.449;HRun=0;HaplotypeScore=282.7250;InbreedingCoeff=-0.2419;MQ=23.98;MQ0=435;MQRankSum=0.623;QD=0.49;ReadPosRankSum=2.601;VQSLOD=2.5296;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:101,0:58:11.18:16,0,11	0/0:37,0:22:27.58:0,28,198	./.	./.	./.	0/0:59,0:46:5.87:0,6,39	0/1:96,0:34:26.16:26,0,76	0/0:115,0:26:58.25:0,58,354	0/1:84,2:52:57.38:57,0,92	0/1:111,0:71:32.01:32,0,969	0/0:46,0:37:3.01:0,3,46	0/1:105,2:69:33.05:33,0,75	0/1:94,1:49:24.82:25,0,130	0/1:75,1:41:9.27:17,0,9	0/0:108,0:65:16.32:0,16,106	0/0:103,0:66:0.49:0,0,61	0/0:98,0:67:85.11:0,85,927	0/0:81,0:50:13.67:0,14,415	0/0:54,0:19:25.26:0,25,169	0/1:47,4:45:8.47:8,0,47	0/1:246,3:125:59.76:60,0,65	1/1:44,3:34:8.35:191,8,0	0/1:42,0:32:3.10:3,0,5	0/1:130,2:71:68.48:83,0,68	0/0:90,0:69:11.86:0,12,135	0/0:70,0:39:44.66:0,45,608	0/1:64,6:48:45.12:205,0,45	0/1:33,1:19:19.18:19,0,139
chr10	45409754	.	CAT	C	1342.03	PASS	AB=0.993;AC=25;AF=0.500;AN=50;BaseQRankSum=1.739;DP=2259;DS;FS=8.428;HRun=0;HaplotypeScore=286.1238;InbreedingCoeff=-0.0077;MQ=23.59;MQ0=456;MQRankSum=-0.278;QD=0.78;ReadPosRankSum=-1.967;VQSLOD=0.2835;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:102,0:57:6.06:17,0,6	0/1:38,0:23:32.42:73,0,32	./.	./.	./.	1/1:58,0:46:4.32:15,4,0	1/1:104,0:38:13.91:86,14,0	0/1:121,0:25:66.54:67,0,193	1/1:85,1:52:8.31:133,8,0	0/1:116,0:73:99:112,0,742	0/0:46,1:38:3:0,3,25	0/1:106,3:71:29.57:89,0,30	0/1:95,0:48:49.71:69,0,50	1/1:73,1:39:7.83:69,8,0	1/1:109,0:64:6.37:22,6,0	0/0:101,0:64:10.21:0,10,71	0/0:104,1:73:4.03:0,4,757	0/1:83,1:53:27.03:27,0,449	0/0:59,0:20:29.11:0,29,190	0/0:50,0:44:5.17:0,5,28	0/1:247,1:122:28.09:28,0,153	1/1:43,2:32:11.35:106,11,0	0/1:40,0:30:1.77:53,0,2	1/1:132,1:73:6.05:127,6,0	0/0:93,0:70:5.15:0,5,114	0/1:70,1:37:68.54:331,0,69	0/1:73,0:51:80.40:80,0,130	0/0:32,0:17:23.81:0,24,178
chr10	45409784	.	TAC	T	79.90	PASS	AB=0.950;AC=10;AF=0.208;AN=48;BaseQRankSum=4.603;DP=2618;DS;FS=1.563;HRun=0;HaplotypeScore=308.0543;InbreedingCoeff=0.0474;MQ=21.12;MQ0=670;MQRankSum=-2.803;QD=0.09;ReadPosRankSum=-1.851;VQSLOD=1.7579;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:95,1:46:1.22:1,0,41	0/0:44,0:26:19.99:0,20,241	./.	./.	./.	./.	0/0:113,1:27:6:0,6,85	0/1:228,3:23:68.17:68,0,309	0/0:91,1:54:8.57:0,9,118	0/1:125,5:83:59.13:59,0,1171	0/0:51,1:42:6.02:0,6,82	0/0:122,4:69:3.52:0,4,169	0/0:113,0:55:23.69:0,24,464	0/0:87,1:42:2.52:0,3,50	1/1:112,0:66:1.94:6,2,0	1/1:109,2:73:2.48:9,2,0	0/0:113,1:74:99:0,113,1572	0/0:99,0:62:65.08:0,65,864	0/0:52,3:15:13.67:0,14,154	0/0:74,3:67:11.90:0,12,165	0/0:248,0:104:21.40:0,21,310	0/0:54,0:36:3.88:0,4,27	0/1:53,0:30:0:0,0,0	0/0:137,1:69:7.51:0,8,183	0/0:98,0:74:2.99:0,3,24	0/0:93,3:45:1.20:0,1,805	0/1:76,0:54:33.26:33,0,49	0/1:32,2:21:14.51:15,0,295
chr10	45409792	.	CACAT	C	381.77	PASS	AB=0.989;AC=12;AF=0.240;AN=50;BaseQRankSum=5.030;DP=2649;DS;FS=5.227;HRun=0;HaplotypeScore=311.3971;InbreedingCoeff=-0.1371;MQ=20.90;MQ0=685;MQRankSum=-3.285;QD=0.34;ReadPosRankSum=-5.528;VQSLOD=0.6695;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:96,4:49:6.10:6,0,40	0/0:45,0:27:1.56:0,2,303	./.	./.	./.	0/1:69,0:50:0:0,0,0	0/0:106,0:26:6.46:0,6,122	0/0:245,0:24:59.36:0,59,481	0/1:93,0:52:4.02:4,0,110	0/1:127,2:80:99:269,0,1712	0/0:48,5:40:6.02:0,6,129	0/1:129,0:68:24.35:24,0,183	0/0:115,0:53:2.47:0,2,590	0/1:90,0:42:11.43:11,0,72	1/1:116,4:68:4.53:12,5,0	0/1:103,7:70:35.10:71,0,35	0/0:118,0:78:91.13:0,91,2468	0/0:99,0:61:11.72:0,12,1246	0/1:48,0:15:33.31:33,0,203	0/0:78,0:66:11.87:0,12,257	0/0:246,3:102:14.97:0,15,374	0/0:59,0:40:2.94:0,3,18	0/0:55,0:29:0.47:0,0,1	0/1:138,0:70:13.07:13,0,185	0/0:101,2:77:2.87:0,3,17	0/0:103,0:46:3.12:0,3,1007	0/1:89,0:58:63.23:63,0,124	0/0:37,0:21:12.39:0,12,433
chr10	45409794	.	CAT	C	593.65	PASS	AB=0.995;AC=19;AF=0.380;AN=50;BaseQRankSum=4.696;DP=2638;DS;FS=1.000;HRun=0;HaplotypeScore=295.5569;InbreedingCoeff=-0.2326;MQ=20.87;MQ0=682;MQRankSum=-3.808;QD=0.35;ReadPosRankSum=-5.420;VQSLOD=0.6182;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:100,0:49:7.54:8,0,17	0/0:45,0:27:4.19:0,4,233	./.	./.	./.	0/1:67,1:49:0:0,0,0	0/0:107,0:25:6.49:0,6,97	0/1:245,0:25:50.35:50,0,238	0/1:91,0:50:7.63:8,0,97	0/1:128,0:80:99:261,0,1180	0/0:51,1:39:6.02:0,6,105	0/1:128,0:68:99:122,0,110	0/1:113,1:53:37.98:38,0,406	0/1:89,1:41:40.68:46,0,41	1/1:117,1:66:2.92:9,3,0	1/1:111,0:69:0.13:55,0,0	0/0:119,0:78:89.71:0,90,1883	0/0:99,0:59:4.32:0,4,894	0/1:46,0:15:11.21:11,0,167	0/1:81,0:68:5.02:5,0,172	0/0:246,0:100:15.35:0,15,268	1/1:58,0:39:2.90:16,3,0	0/0:55,0:29:0.47:0,0,1	0/1:138,0:70:12.43:12,0,167	0/0:102,2:78:1.91:0,2,6	0/1:102,0:46:44.04:44,0,736	0/1:86,2:58:40.29:40,0,109	0/0:38,0:22:2.79:0,3,298
chr10	45409796	.	TAC	T	816.91	PASS	AB=0.938;AC=14;AF=0.292;AN=48;BaseQRankSum=2.081;DP=2630;DS;FS=11.565;HRun=0;HaplotypeScore=295.1019;InbreedingCoeff=-0.0481;MQ=20.88;MQ0=679;MQRankSum=-4.335;QD=0.59;ReadPosRankSum=-2.165;VQSLOD=0.5329;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:94,2:47:2.04:6,2,0	0/0:39,6:27:14.46:0,14,200	./.	./.	./.	./.	0/0:108,0:25:6:0,6,85	0/1:241,4:25:99:115,0,220	0/0:87,4:50:10.17:0,10,105	0/1:113,16:83:99:456,0,1231	0/0:48,4:39:6.02:0,6,100	0/1:117,10:67:99:120,0,126	0/1:108,6:51:67.33:67,0,363	0/1:86,4:41:27.24:61,0,27	0/1:110,6:65:1.67:2,0,2	0/1:103,7:68:22.85:60,0,23	0/0:119,0:78:99:0,116,1791	0/0:95,1:58:2.09:0,2,834	0/0:44,0:15:11.66:0,12,154	0/0:73,8:67:11.89:0,12,177	0/0:243,6:104:14.71:0,15,251	1/1:51,6:38:3.01:34,3,0	0/0:49,4:28:0:0,0,0	0/0:130,6:69:7.66:0,8,142	0/1:92,10:77:0:0,0,0	0/1:99,3:46:14.99:15,0,619	0/1:78,9:57:8.98:9,0,173	0/0:38,2:23:23.79:0,24,237
chr10	45409804	.	CACAT	C	109.96	PASS	AB=0.997;AC=13;AF=0.260;AN=50;BaseQRankSum=4.105;DP=2606;DS;FS=4.473;HRun=0;HaplotypeScore=303.3657;InbreedingCoeff=-0.1071;MQ=20.89;MQ0=663;MQRankSum=-3.502;QD=0.09;ReadPosRankSum=-4.689;VQSLOD=1.5647;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:99,0:51:2.04:6,2,0	0/1:45,0:26:4.52:5,0,190	./.	./.	./.	0/1:66,0:48:0:0,0,0	0/0:108,0:29:6.41:0,6,74	0/1:231,0:21:41.06:41,0,267	0/0:94,0:51:5.58:0,6,55	0/1:127,0:77:98.92:99,0,1805	0/0:50,0:36:6.02:0,6,108	0/1:121,1:64:19.92:20,0,209	0/1:121,1:55:6.62:7,0,499	0/0:89,0:38:0.42:0,0,48	0/1:106,0:57:9.58:10,0,34	0/0:110,0:69:1.49:0,1,86	0/0:119,0:73:99:0,99,2537	0/0:94,0:57:21.23:0,21,973	0/1:42,0:18:15.58:16,0,100	0/0:85,0:69:14.88:0,15,305	0/0:250,0:107:31.42:0,31,491	0/1:59,0:40:12:12,0,16	0/0:61,0:30:0.34:0,0,0	0/1:135,2:70:17.33:17,0,80	0/1:108,0:83:0.03:0,0,0	0/0:92,0:44:7.40:0,7,944	0/0:88,0:58:26.77:0,27,298	0/0:43,0:26:16.49:0,16,279
chr10	45409806	.	CAT	C	438.04	PASS	AB=0.996;AC=19;AF=0.380;AN=50;BaseQRankSum=5.099;DP=2588;DS;FS=15.301;HRun=0;HaplotypeScore=289.7716;InbreedingCoeff=-0.1633;MQ=20.87;MQ0=664;MQRankSum=-5.689;QD=0.27;ReadPosRankSum=-3.691;VQSLOD=0.7120;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:100,0:50:2.04:6,2,0	0/1:45,0:26:4.28:4,0,133	./.	./.	./.	0/1:64,0:46:0:0,0,0	0/0:105,0:28:6.41:0,6,71	0/1:223,0:17:26.83:27,0,302	0/0:91,0:48:5.44:0,5,54	0/1:128,1:78:99:299,0,1405	0/0:52,0:38:6.02:0,6,81	0/1:119,0:63:54.41:54,0,145	0/1:119,0:53:40.02:40,0,312	0/1:90,0:38:9.87:27,0,10	0/1:106,1:58:8.03:8,0,29	0/1:106,1:66:29.53:30,0,48	0/0:119,0:73:74.46:0,74,1850	0/1:95,0:58:4.82:5,0,805	0/1:42,0:17:11.83:12,0,102	0/0:82,1:68:14.87:0,15,218	0/0:250,0:106:34.92:0,35,399	1/1:57,1:40:5.82:33,6,0	0/1:61,0:30:0.11:0,0,0	0/1:134,1:68:9.29:9,0,68	0/1:107,2:83:0.13:0,0,0	0/0:90,0:42:21.89:0,22,785	0/0:87,1:59:5.33:0,5,266	0/1:45,0:28:16.84:17,0,113
chr10	45409820	.	CAT	C	132.28	PASS	AB=0.996;AC=10;AF=0.200;AN=50;BaseQRankSum=3.689;DP=2493;DS;FS=0.612;HRun=0;HaplotypeScore=307.4857;InbreedingCoeff=0.0596;MQ=21.56;MQ0=542;MQRankSum=-3.950;QD=0.16;ReadPosRankSum=-0.895;VQSLOD=2.0555;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:100,0:50:1.82:0,2,4	0/1:38,0:23:3.15:3,0,120	./.	./.	./.	0/1:57,0:41:0:0,0,0	0/0:91,2:29:3.29:0,3,19	0/1:175,0:17:9.65:10,0,223	0/0:92,0:54:1.86:0,2,30	0/1:135,1:89:99:177,0,1507	0/0:47,0:36:5.98:0,6,58	0/0:115,0:61:19.24:0,19,265	0/0:122,0:62:32.71:0,33,450	1/1:92,0:42:2.97:14,3,0	0/1:114,0:66:3.71:4,0,31	0/1:97,0:61:4.80:5,0,76	0/0:111,0:71:99:0,111,1775	0/0:87,0:52:59.23:0,59,772	0/0:48,0:21:18.70:0,19,291	0/0:95,0:78:18.53:0,19,311	0/0:235,0:106:42.77:0,43,667	0/0:77,1:56:3.92:0,4,13	0/1:58,0:29:0.11:0,0,0	0/0:129,0:65:3.63:0,4,39	0/0:95,2:80:2.86:0,3,25	0/0:91,0:42:41.82:0,42,798	0/0:79,0:55:30.65:0,31,371	0/1:51,0:32:27.67:28,0,164
chr10	45409838	.	CAT	C	61.97	PASS	AB=0.942;AC=13;AF=0.271;AN=48;BaseQRankSum=3.465;DP=2079;DS;FS=6.985;HRun=0;HaplotypeScore=265.7008;InbreedingCoeff=-0.1464;MQ=22.16;MQ0=440;MQRankSum=-3.021;QD=0.07;ReadPosRankSum=-4.163;VQSLOD=1.2520;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:70,5:45:4.77:0,5,20	0/1:27,0:19:20.88:21,0,94	./.	./.	./.	./.	1/1:71,0:19:1.82:6,2,0	0/1:110,1:18:22.98:23,0,320	0/0:76,9:53:0.89:0,1,104	0/1:116,0:79:22.44:22,0,1718	0/0:43,0:33:6.01:0,6,70	0/0:81,19:53:10.89:0,11,293	0/1:81,17:55:13.38:13,0,518	0/1:63,13:39:0.52:1,0,1	0/0:94,0:51:10.19:0,10,66	0/0:80,1:49:11.02:0,11,116	0/0:108,0:69:99:0,104,1732	0/1:67,0:39:5.47:5,0,465	0/0:49,0:27:35.40:0,35,639	0/1:78,8:66:21.27:21,0,172	0/0:185,4:89:14.38:0,14,247	0/0:65,11:53:5.80:0,6,70	0/1:42,8:24:0.11:0,0,0	0/1:99,5:54:1.02:1,0,11	0/0:85,0:69:3.01:0,3,62	0/0:97,2:47:3.16:0,3,890	0/1:69,3:47:56.65:59,0,57	0/1:33,1:22:8.24:8,0,167
chr10	45409842	.	C	CAT	91.12	PASS	AB=0.999;AC=16;AF=0.308;AN=52;BaseQRankSum=3.124;DP=2126;DS;FS=9.175;HRun=0;HaplotypeScore=271.8867;InbreedingCoeff=0.1872;MQ=21.98;MQ0=448;MQRankSum=-0.872;QD=0.10;ReadPosRankSum=-3.966;VQSLOD=0.5825;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:79,0:47:1.87:2,0,16	0/0:25,0:17:9.87:0,10,113	./.	./.	0/1:46,0:37:0:0,0,0	0/1:46,0:28:0:0,0,0	1/1:82,0:25:3.26:18,3,0	0/0:114,0:27:23.32:0,23,346	0/0:84,0:51:6.91:0,7,85	0/0:119,0:82:57.01:0,57,1528	0/0:38,0:27:6.02:0,6,89	0/0:98,0:52:28.73:0,29,266	0/0:96,1:56:20.50:0,20,486	1/1:76,2:39:3.05:12,3,0	0/1:94,0:49:14:14,0,20	0/1:77,0:47:2.66:3,0,114	0/0:109,0:68:82.91:0,83,1286	0/0:69,0:39:10.75:0,11,447	0/0:49,0:27:47.98:0,48,531	0/0:89,1:69:16.74:0,17,151	0/0:200,0:94:5.10:0,5,134	0/0:78,1:50:5.81:0,6,59	1/1:53,0:25:0.36:1,0,0	1/1:106,0:55:3.58:15,4,0	0/0:84,0:68:1.76:0,2,49	0/1:105,0:53:63.01:63,0,542	0/1:72,0:46:35.53:36,0,52	0/1:32,0:21:54.49:54,0,176
chr10	45409848	.	CACAT	C	251.44	PASS	AB=1.000;AC=11;AF=0.212;AN=52;BaseQRankSum=4.087;DP=2150;DS;FS=13.491;HRun=0;HaplotypeScore=269.8334;InbreedingCoeff=0.0429;MQ=21.70;MQ0=468;MQRankSum=-2.280;QD=0.37;ReadPosRankSum=-2.618;VQSLOD=0.7406;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:82,0:48:5.14:0,5,23	0/1:26,0:18:4.46:4,0,38	./.	./.	0/0:49,0:38:0:0,0,0	0/0:50,0:28:0.47:0,0,1	0/0:85,0:28:2.61:0,3,12	0/1:113,0:28:11.82:12,0,317	0/1:84,0:47:0.03:0,0,122	0/1:116,0:78:99:166,0,1444	0/0:38,0:25:5.98:0,6,80	0/0:97,0:50:16.78:0,17,316	0/0:100,0:57:6.39:0,6,458	0/0:80,0:39:0.77:0,1,2	1/1:91,0:45:5.37:33,5,0	0/0:79,0:49:11.82:0,12,195	0/0:102,0:63:85.23:0,85,1846	0/1:71,0:41:37.27:37,0,430	0/1:41,0:24:35.09:35,0,335	0/0:90,2:70:11.93:0,12,195	0/0:207,2:97:33.28:0,33,739	0/0:80,0:51:5.81:0,6,91	0/0:55,0:26:0.35:0,0,1	1/1:107,0:53:0.55:2,1,0	0/0:81,0:66:3.95:0,4,78	0/0:109,0:53:27.74:0,28,793	0/0:76,0:46:0.22:0,0,114	0/1:35,0:23:79.29:79,0,217
chr10	45409852	.	TAC	T	666.50	PASS	AB=0.932;AC=16;AF=0.320;AN=50;BaseQRankSum=0.931;DP=2185;DS;FS=5.091;HRun=0;HaplotypeScore=256.8571;InbreedingCoeff=0.0845;MQ=21.32;MQ0=500;MQRankSum=-3.129;QD=0.67;ReadPosRankSum=-3.982;VQSLOD=1.7882;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:79,1:48:0.52:1,1,0	0/1:23,0:14:0.02:0,0,0	./.	./.	./.	0/1:45,6:30:0.01:0,0,0	1/1:80,6:27:1.55:4,2,0	0/1:95,12:28:12.60:439,0,13	0/0:82,3:45:1.36:0,1,91	0/1:106,1:74:5.80:6,0,888	0/0:36,0:25:3.01:0,3,51	0/0:99,1:48:13.91:0,14,167	0/1:104,1:58:21.04:21,0,198	1/1:79,1:38:2.83:28,3,0	1/1:88,1:44:2.70:29,3,0	0/0:75,0:49:11.43:0,11,130	0/0:107,0:65:68.29:0,68,1066	0/0:71,0:40:21.59:0,22,328	0/0:43,1:23:2.12:0,2,113	0/1:80,3:66:27.38:27,0,73	0/0:209,0:97:32.91:0,33,541	0/0:79,3:53:3.01:0,3,37	0/0:59,0:27:0.41:0,0,1	0/0:107,1:53:0.27:0,0,0	0/0:70,1:65:3.01:0,3,41	0/1:100,6:54:99:172,0,562	0/0:73,0:45:18.46:0,18,160	0/1:37,1:28:60.08:60,0,170
chr10	45409856	.	C	CAT	146.07	PASS	AB=0.984;AC=14;AF=0.269;AN=52;BaseQRankSum=2.509;DP=2252;DS;FS=5.763;HRun=0;HaplotypeScore=270.3003;InbreedingCoeff=0.0363;MQ=21.05;MQ0=524;MQRankSum=-0.876;QD=0.14;ReadPosRankSum=-1.592;VQSLOD=1.4893;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:83,1:50:2.16:0,2,7	0/1:25,0:15:12.14:12,0,16	./.	./.	0/1:56,0:42:0.01:0,0,0	0/1:55,0:31:0.09:0,0,0	1/1:91,0:28:2.59:17,3,0	0/0:107,0:28:40.53:0,41,610	0/1:85,2:44:34.58:35,0,42	0/1:121,3:80:92.83:93,0,1326	0/0:39,0:25:3.01:0,3,46	0/1:101,2:48:37.65:38,0,176	0/0:109,0:59:14.09:0,14,324	0/0:84,0:38:1.08:0,1,4	0/1:97,3:44:0.11:2,0,0	0/1:82,4:51:27.83:28,0,128	0/0:107,0:64:54.83:0,55,1016	0/0:72,0:38:16.46:0,16,351	0/0:41,0:17:14.28:0,14,181	0/0:87,0:66:11.85:0,12,152	0/0:221,0:102:31.32:0,31,502	0/0:84,0:54:3.01:0,3,45	0/0:60,0:28:0.44:0,0,1	1/1:118,0:58:1.86:29,2,0	0/0:84,0:68:1.67:0,2,49	0/1:108,2:54:5.43:5,0,822	0/1:74,0:44:11.70:12,0,175	0/0:44,0:28:5.45:0,5,174
chr10	45409860	.	CACAT	C	389.34	PASS	AB=0.996;AC=17;AF=0.327;AN=52;BaseQRankSum=3.643;DP=2284;DS;FS=0.559;HRun=0;HaplotypeScore=278.0454;InbreedingCoeff=0.0051;MQ=20.84;MQ0=538;MQRankSum=-2.861;QD=0.37;ReadPosRankSum=-3.671;VQSLOD=1.7327;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:87,0:49:5.20:30,5,0	0/1:26,0:14:2.47:2,0,23	./.	./.	0/1:57,1:43:0.04:0,0,0	0/0:58,0:33:1.72:0,2,5	0/0:91,0:27:1.99:0,2,11	0/1:99,0:25:25.54:26,0,242	0/0:90,0:46:0.38:0,0,115	0/1:124,1:79:99:243,0,1546	0/0:37,0:24:3.01:0,3,76	0/0:105,0:48:2.50:0,2,195	0/1:106,1:58:23.62:24,0,293	1/1:83,1:39:2.11:11,2,0	1/1:103,0:43:2.08:46,2,0	0/1:87,0:51:26.52:27,0,137	0/0:104,0:61:35.24:0,35,1444	0/0:73,0:38:7.41:0,7,496	0/1:40,0:16:63.48:63,0,163	0/0:89,1:66:11.89:0,12,181	0/0:233,1:105:33.87:0,34,837	0/0:85,2:56:3.01:0,3,64	0/0:63,0:28:0.70:0,1,2	1/1:122,0:59:2.34:15,2,0	0/1:81,0:66:0.06:0,0,51	0/0:114,0:57:2.78:0,3,845	0/0:72,1:41:24.78:0,25,302	0/1:44,0:28:32.13:32,0,248
chr10	45409862	.	CAT	C	873.27	PASS	AB=0.987;AC=24;AF=0.462;AN=52;BaseQRankSum=1.547;DP=2274;DS;FS=2.342;HRun=0;HaplotypeScore=260.4795;InbreedingCoeff=-0.0159;MQ=20.82;MQ0=547;MQRankSum=-2.707;QD=0.58;ReadPosRankSum=-1.202;VQSLOD=2.5249;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:89,0:49:5.31:29,5,0	0/1:24,0:12:2.39:2,0,23	./.	./.	0/1:57,2:43:0:0,0,0	0/0:59,0:33:0.47:0,0,1	1/1:88,0:27:1.55:4,2,0	1/1:103,2:24:12.44:368,12,0	0/1:90,0:45:1.14:1,0,80	0/1:118,3:76:99:170,0,1213	0/0:36,1:24:3.01:0,3,58	0/0:104,0:48:3.21:0,3,161	0/1:104,0:55:59.43:59,0,186	1/1:84,0:39:2.71:15,3,0	1/1:100,1:43:2.65:16,3,0	0/1:85,0:49:16.35:16,0,122	0/0:105,2:63:34.98:0,35,1129	0/1:70,1:38:6.03:6,0,343	0/1:41,0:16:16.56:17,0,172	0/1:89,1:65:7.05:7,0,94	0/0:236,1:107:33.37:0,33,618	0/0:87,0:56:3.01:0,3,54	0/0:64,0:29:0.25:0,0,1	1/1:120,1:59:1.94:13,2,0	0/1:75,2:63:0.53:1,0,56	0/1:105,5:56:99:240,0,510	0/0:72,0:41:24.42:0,24,236	0/1:44,0:28:46.81:47,0,170
chr10	45409864	.	TAC	T	659.75	PASS	AB=0.908;AC=15;AF=0.288;AN=52;BaseQRankSum=-0.298;DP=2277;DS;FS=13.708;HRun=0;HaplotypeScore=256.9441;InbreedingCoeff=0.0945;MQ=20.66;MQ0=564;MQRankSum=-3.128;QD=0.66;ReadPosRankSum=-0.804;VQSLOD=0.9371;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:76,15:50:0.14:0,0,0	0/0:25,0:12:2.73:0,3,22	./.	./.	0/1:56,3:43:0:0,0,0	0/1:57,2:33:0.01:0,0,0	1/1:87,3:29:1.55:4,2,0	1/1:107,7:24:0.19:329,0,0	0/0:77,12:44:1.31:0,1,64	0/0:118,2:74:32.71:0,33,1396	0/0:37,0:23:3.01:0,3,51	0/1:89,11:48:9.14:9,0,107	0/1:92,12:54:62.28:62,0,131	0/1:67,16:38:2.23:23,0,2	1/1:102,1:42:2.35:13,2,0	0/0:82,1:50:4.18:0,4,97	0/0:108,0:64:75.47:0,75,1131	0/0:66,0:35:29.70:0,30,358	0/1:41,1:16:30.92:31,0,145	0/0:79,6:61:5.97:0,6,98	0/0:241,1:107:32.64:0,33,529	0/0:62,25:56:3.01:0,3,48	0/0:49,15:29:1.03:0,1,3	0/0:110,8:56:0.44:0,0,1	0/0:74,0:61:5.69:0,6,65	0/1:100,10:54:99:266,0,462	0/0:66,2:39:22.74:0,23,272	0/1:36,7:27:41.46:41,0,167
chr10	45409874	.	CAT	C	808.28	PASS	AB=0.986;AC=22;AF=0.423;AN=52;BaseQRankSum=4.879;DP=2298;DS;FS=9.863;HRun=0;HaplotypeScore=253.5269;InbreedingCoeff=-0.0173;MQ=20.47;MQ0=600;MQRankSum=-2.322;QD=0.53;ReadPosRankSum=-1.231;VQSLOD=0.9408;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:87,1:50:5.55:33,6,0	0/0:24,0:12:0.99:0,1,2	./.	./.	0/1:59,3:46:0:0,0,0	1/1:54,1:30:2:12,2,0	0/1:103,0:37:0.02:0,0,0	0/1:160,1:24:99:134,0,123	0/1:85,0:42:0.12:0,0,63	0/1:124,2:74:99:256,0,1319	0/0:38,0:26:2.88:0,3,52	0/1:88,1:39:46.11:46,0,82	0/1:101,0:52:98.40:98,0,122	1/1:80,0:35:4.49:28,4,0	1/1:98,3:42:3.08:17,3,0	0/1:76,4:48:53.84:75,0,54	0/0:111,0:65:6.05:0,6,1070	0/1:65,0:32:4.35:4,0,268	0/0:49,0:16:7.46:0,7,124	0/0:79,0:57:8.98:0,9,132	0/0:249,1:114:31.25:0,31,565	0/0:84,0:53:2.74:0,3,35	0/0:63,0:30:1.61:0,2,4	1/1:114,2:56:3.25:15,3,0	0/1:71,0:58:1.28:1,0,33	0/1:110,2:53:99:196,0,264	0/0:61,0:34:8.59:0,9,288	0/1:40,1:26:27.39:27,0,146
chr10	45409876	.	TAC	T	643.54	PASS	AB=0.944;AC=14;AF=0.269;AN=52;BaseQRankSum=0.694;DP=2298;DS;FS=5.732;HRun=0;HaplotypeScore=255.5613;InbreedingCoeff=-0.0874;MQ=20.39;MQ0=609;MQRankSum=-3.072;QD=0.53;ReadPosRankSum=-0.687;VQSLOD=1.4980;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:75,12:51:0.86:0,1,3	0/0:24,0:12:2.98:0,3,23	./.	./.	0/1:59,2:45:0:0,0,0	0/1:50,4:31:0.42:0,0,0	0/1:98,7:36:0:0,0,0	0/1:171,0:24:41.85:42,0,204	0/0:69,13:42:3.43:0,3,57	0/1:122,3:75:99:257,0,1174	0/0:40,0:28:2.87:0,3,29	0/1:77,11:40:43.65:44,0,57	0/1:84,13:49:42.21:42,0,59	0/0:62,19:35:0.70:0,1,6	1/1:100,2:43:0.36:2,0,0	0/1:74,2:45:21.80:22,0,38	0/0:108,0:64:60.64:0,61,1025	0/1:59,1:31:17.03:17,0,186	0/0:54,0:16:13.92:0,14,109	0/0:74,0:53:9.03:0,9,128	0/0:241,4:109:30.77:0,31,470	0/0:68,14:52:2.92:0,3,17	0/0:47,11:28:1.13:0,1,3	0/1:101,7:53:0.12:1,0,0	0/0:67,3:58:5.70:0,6,31	0/1:106,7:54:99:312,0,284	0/0:63,0:35:22.10:0,22,283	0/1:39,1:29:22.18:22,0,91
chr10	45409886	.	CAT	C	1092.12	PASS	AB=0.962;AC=18;AF=0.346;AN=52;BaseQRankSum=1.788;DP=2249;DS;FS=24.491;HRun=0;HaplotypeScore=252.0605;InbreedingCoeff=-0.1105;MQ=20.22;MQ0=654;MQRankSum=-3.971;QD=0.74;ReadPosRankSum=-0.527;VQSLOD=1.0822;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:88,0:48:2.82:10,3,0	0/0:20,0:11:2.67:0,3,41	./.	./.	0/1:56,6:48:0:0,0,0	0/1:52,2:31:0.26:0,0,0	1/1:105,5:36:2.44:11,2,0	0/1:209,2:23:55.31:55,0,211	0/1:79,1:43:1.36:1,0,24	0/1:123,8:79:99:478,0,1214	0/0:34,3:28:1.68:0,2,5	0/1:77,1:41:35.28:50,0,35	0/1:83,0:44:46.72:50,0,47	0/0:79,1:36:5.34:0,5,23	0/0:91,4:38:2.28:0,2,18	0/1:67,8:44:13.42:75,0,13	0/1:104,2:59:3.50:4,0,1028	0/1:57,3:28:76.25:76,0,173	0/0:65,0:14:16.08:0,16,158	0/0:67,0:45:8.99:0,9,129	0/0:234,6:106:29.76:0,30,459	0/1:68,0:43:0.08:1,0,0	0/0:47,0:29:1.02:0,1,3	0/1:98,2:49:0.38:0,0,0	0/0:66,2:55:3.48:0,3,32	0/1:107,10:57:99:364,0,557	0/0:57,0:31:6.16:0,6,274	0/1:40,1:27:38.97:39,0,95
chr10	45409888	.	TAC	T	498.97	PASS	AB=0.939;AC=15;AF=0.288;AN=52;BaseQRankSum=2.974;DP=2260;DS;FS=11.551;HRun=0;HaplotypeScore=257.1986;InbreedingCoeff=-0.0789;MQ=20.23;MQ0=660;MQRankSum=-2.756;QD=0.44;ReadPosRankSum=-0.160;VQSLOD=0.7989;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:82,6:49:0.90:0,1,3	0/0:19,0:10:3.01:0,3,51	./.	./.	0/1:60,0:48:0:0,0,0	1/1:52,2:32:0.81:3,1,0	0/0:106,3:34:0.40:0,0,1	1/1:219,0:20:5.95:44,6,0	0/1:74,6:45:0.88:1,0,16	0/1:131,2:82:99:183,0,1239	0/0:34,1:27:2.87:0,3,29	0/1:68,10:40:24.09:49,0,24	0/1:74,8:45:16.39:16,0,57	0/0:73,6:36:6:0,6,53	0/0:93,1:38:3.77:0,4,32	0/1:74,2:45:30.83:31,0,69	0/0:107,0:61:50.16:0,50,1056	0/1:58,1:29:52.76:53,0,146	0/1:64,0:14:8.29:8,0,118	0/0:59,7:45:6.02:0,6,84	0/0:239,2:110:8.98:0,9,319	0/1:52,14:43:0.18:0,0,0	0/0:41,4:27:1.02:0,1,3	0/0:95,3:48:0.70:0,1,2	0/0:66,0:54:3.48:0,3,48	0/1:110,6:57:99:203,0,802	0/0:53,0:31:6.67:0,7,215	0/1:39,0:27:28.32:28,0,59
chr10	45409894	.	C	CAT	170.62	PASS	AB=0.982;AC=16;AF=0.308;AN=52;BaseQRankSum=2.631;DP=2243;DS;FS=6.897;HRun=0;HaplotypeScore=276.0417;InbreedingCoeff=-0.0583;MQ=20.21;MQ0=651;MQRankSum=-0.999;QD=0.13;ReadPosRankSum=-1.452;VQSLOD=1.5870;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:90,0:49:2.73:0,3,17	0/0:20,0:10:3.01:0,3,45	./.	./.	0/1:59,3:48:0.25:0,0,1	0/1:55,1:33:0.54:1,0,1	0/1:107,0:36:4.49:4,0,7	0/1:227,0:10:27.47:27,0,48	0/0:76,0:42:1.32:0,1,52	0/1:129,3:84:99:115,0,1556	1/1:32,0:25:0.24:1,0,0	0/1:79,0:41:0.97:1,0,78	0/1:82,1:46:33.33:33,0,71	0/0:78,0:36:4.38:0,4,54	0/1:92,1:39:4.97:5,0,28	0/1:78,1:50:48.03:62,0,48	0/0:101,0:55:77.20:0,77,1099	0/0:61,1:31:29.19:0,29,351	0/0:67,0:13:4.02:0,4,116	0/0:62,0:43:6.02:0,6,91	0/0:233,7:111:32.36:0,32,420	0/1:66,0:41:0.16:0,0,0	0/1:45,0:27:0.11:0,0,0	0/1:96,1:50:0.14:0,0,1	0/1:65,1:55:27.65:28,0,37	0/0:115,0:58:79.64:0,80,1231	0/1:52,1:27:3.73:4,0,181	0/0:39,0:26:21.85:0,22,222
chr10	45409898	.	CAT	C	515.65	PASS	AB=0.987;AC=19;AF=0.365;AN=52;BaseQRankSum=3.871;DP=2210;DS;FS=17.578;HRun=0;HaplotypeScore=262.3599;InbreedingCoeff=-0.1320;MQ=20.22;MQ0=646;MQRankSum=-3.163;QD=0.43;ReadPosRankSum=-1.818;VQSLOD=0.3461;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:85,0:45:3.56:11,4,0	0/0:21,0:10:2.56:0,3,57	./.	./.	0/1:60,0:46:0:0,0,0	1/1:57,0:34:0.96:3,1,0	0/1:107,0:37:5.63:6,0,6	0/0:233,0:5:6.54:0,7,75	0/1:72,3:41:21.74:24,0,22	0/1:127,0:79:99:172,0,1267	0/0:32,0:24:1.68:0,2,5	0/1:77,3:42:45.43:45,0,59	0/1:74,1:42:70.74:71,0,103	0/0:76,1:37:5.88:0,6,51	0/0:91,4:39:1.21:0,1,32	0/1:80,1:50:46.45:46,0,58	0/0:98,1:56:17.74:0,18,1162	0/1:61,0:31:71.14:71,0,218	0/1:70,0:13:17.13:17,0,98	0/0:58,0:41:5.98:0,6,75	0/0:234,4:111:24.09:0,24,214	1/1:62,1:40:2.99:25,3,0	0/0:41,0:23:2.77:0,3,25	1/1:96,1:48:1.47:5,1,0	0/0:67,0:55:5.05:0,5,63	0/1:113,0:58:99:107,0,975	0/0:49,1:26:4.61:0,5,201	0/1:41,1:29:46.41:46,0,62
chr10	45409900	.	TAC	T	334.45	PASS	AB=0.920;AC=14;AF=0.269;AN=52;BaseQRankSum=3.299;DP=2201;DS;FS=4.720;HRun=0;HaplotypeScore=260.2361;InbreedingCoeff=-0.1474;MQ=20.19;MQ0=642;MQRankSum=-2.034;QD=0.41;ReadPosRankSum=0.518;VQSLOD=2.1807;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:77,8:45:3.02:0,3,17	0/0:21,0:10:2.56:0,3,50	./.	./.	0/1:53,6:45:0:0,0,0	1/1:53,4:34:0.81:3,1,0	0/0:103,5:37:2.92:0,3,11	0/0:238,1:5:14.86:0,15,128	0/1:64,12:43:35.36:35,0,49	0/1:123,7:81:99:165,0,1088	1/1:30,3:25:2.76:17,3,0	0/1:68,10:42:22.63:23,0,45	0/1:66,8:41:21.82:22,0,127	0/0:58,18:38:6.01:0,6,63	0/0:90,3:39:3.42:0,3,23	0/1:71,9:50:42.19:73,0,42	0/0:98,0:55:69.63:0,70,1107	0/1:58,3:32:47.74:48,0,225	0/1:66,3:13:45.30:51,0,45	0/0:54,2:40:3.01:0,3,39	0/0:229,11:112:7.34:0,7,86	0/0:53,7:37:0.12:0,0,1	0/0:28,9:23:2.79:0,3,37	0/0:90,5:49:0.70:0,1,2	0/0:61,3:53:3.01:0,3,51	0/0:109,2:56:39.91:0,40,887	0/1:46,2:26:14.39:14,0,178	0/1:38,2:28:9.72:10,0,16
chr10	45409910	.	CAT	C	602.17	PASS	AB=0.987;AC=23;AF=0.442;AN=52;BaseQRankSum=2.641;DP=2105;DS;FS=9.465;HRun=0;HaplotypeScore=246.3542;InbreedingCoeff=-0.1395;MQ=20.34;MQ0=608;MQRankSum=-2.189;QD=0.48;ReadPosRankSum=-3.213;VQSLOD=0.9344;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:75,0:41:2.79:12,3,0	0/1:20,0:12:19.39:19,0,43	./.	./.	0/1:50,2:39:0:0,0,0	1/1:54,1:33:1.13:3,1,0	0/1:109,2:40:4.57:30,0,5	0/0:249,0:5:13.75:0,14,97	0/1:70,0:41:16.84:17,0,22	0/1:121,2:78:99:153,0,851	0/0:32,0:24:2.09:0,2,7	0/1:79,0:43:32.63:53,0,33	0/1:78,0:45:74.06:74,0,98	0/1:71,0:38:10.42:10,0,22	0/1:86,1:38:1.15:1,0,11	0/1:69,4:46:51.16:53,0,51	0/0:89,0:52:50.79:0,51,1016	0/1:57,1:32:58.49:58,0,164	0/1:65,0:14:34.52:35,0,46	0/0:47,0:34:2.97:0,3,20	0/0:239,3:112:3.55:0,4,43	1/1:52,1:31:8.97:71,9,0	0/0:31,0:21:2.79:0,3,41	1/1:94,1:50:1.73:14,2,0	0/0:51,2:43:3.01:0,3,52	0/0:104,0:53:26.39:0,26,702	0/1:49,1:28:24.12:24,0,120	1/1:36,2:27:5.53:115,6,0
chr10	45409912	.	TAC	T	69.79	PASS	AB=0.944;AC=14;AF=0.269;AN=52;BaseQRankSum=1.999;DP=2057;DS;FS=10.448;HRun=0;HaplotypeScore=245.1769;InbreedingCoeff=0.0771;MQ=20.66;MQ0=590;MQRankSum=-0.186;QD=0.09;ReadPosRankSum=-3.351;VQSLOD=0.9676;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:67,6:38:2.99:0,3,16	0/0:19,0:11:2.56:0,3,31	./.	./.	0/1:49,1:37:0:0,0,0	1/1:55,0:33:0.71:3,1,0	0/1:109,1:40:14.98:15,0,15	0/0:238,0:5:5.96:0,6,57	0/1:59,11:42:7.84:37,0,8	0/0:123,0:79:33.35:0,33,1002	0/0:31,0:24:2.87:0,3,30	0/1:65,12:42:12.11:12,0,50	0/1:73,3:43:35.08:35,0,86	1/1:56,15:37:1.15:4,1,0	0/1:80,3:34:0.44:0,0,1	0/1:69,1:43:30.70:31,0,78	0/0:87,0:52:56.13:0,56,838	0/0:58,0:32:7.46:0,7,119	0/0:63,0:15:9.59:0,10,105	0/0:41,2:31:0:0,0,0	0/0:239,2:118:4.96:0,5,21	0/0:45,2:27:1.72:0,2,15	0/0:26,6:21:2.77:0,3,22	0/1:89,5:50:5.13:13,0,5	0/0:50,1:42:3.01:0,3,34	0/0:100,2:53:20.15:0,20,440	0/0:49,0:28:5.82:0,6,95	1/1:34,0:25:6.26:40,6,0
chr10	45409920	.	CACACAT	C	1929.74	PASS	AB=0.985;AC=29;AF=0.518;AN=56;BaseQRankSum=-1.314;DP=1938;DS;FS=0.980;HRun=0;HaplotypeScore=253.8201;InbreedingCoeff=-0.1870;MQ=22.48;MQ0=500;MQRankSum=0.108;QD=1.12;ReadPosRankSum=-2.991;VQSLOD=2.1575;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:61,0:36:0.71:2,1,0	0/1:22,0:14:21.81:22,0,30	0/0:10,0:1:2.22:0,2,7	0/0:14,0:1:2.94:0,3,18	1/1:44,4:37:3.94:25,4,0	0/1:54,3:36:0.54:1,0,3	0/1:91,2:35:36.60:92,0,37	0/1:192,0:11:59.41:69,0,59	1/1:73,0:46:19.73:225,20,0	0/1:113,7:79:99:552,0,635	0/0:26,3:22:2.44:0,2,24	0/1:68,0:37:15.82:78,0,16	0/1:75,0:46:59.27:130,0,59	1/1:63,0:35:7.25:59,7,0	1/1:75,4:34:0.70:33,1,0	0/1:62,5:45:31.46:174,0,31	0/0:82,0:52:72.97:0,73,1402	0/1:48,1:29:75.45:110,0,75	0/1:58,1:18:49.17:105,0,49	0/1:39,0:26:0:0,0,0	0/1:232,0:124:20.35:20,0,76	1/1:42,0:23:14.62:154,15,0	0/0:30,0:18:2.02:0,2,10	0/1:88,0:51:7.38:38,0,7	0/0:47,2:41:3.44:0,3,22	0/1:99,0:57:84.34:84,0,555	0/1:48,0:28:20.93:21,0,46	1/1:27,0:21:13.35:85,13,0
chr10	45409922	.	CACAT	C	1583.93	PASS	AB=0.986;AC=29;AF=0.518;AN=56;BaseQRankSum=-1.342;DP=1889;DS;FS=0.963;HRun=0;HaplotypeScore=244.1890;InbreedingCoeff=-0.2328;MQ=22.86;MQ0=470;MQRankSum=-0.674;QD=0.98;ReadPosRankSum=-2.089;VQSLOD=2.2563;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:64,0:36:0.19:1,0,0	0/1:21,0:14:11.83:20,0,12	0/1:14,0:5:5:25,0,5	0/1:17,0:2:11.90:13,0,12	1/1:48,0:37:2.99:25,3,0	0/0:57,0:35:2.41:0,2,8	0/1:88,0:32:35.04:58,0,35	0/1:175,0:12:61.68:87,0,62	1/1:71,0:43:4.40:113,4,0	0/1:115,0:76:99:349,0,561	0/0:28,0:22:2.61:0,3,25	0/1:69,0:37:2.01:93,0,2	0/1:76,0:44:63.26:131,0,63	1/1:61,0:33:7.68:60,8,0	1/1:76,0:34:3.41:57,3,0	0/1:65,0:46:38.39:94,0,38	0/0:82,0:53:35.16:0,35,1120	0/1:48,1:28:60.56:109,0,61	0/1:57,0:18:50.33:79,0,50	0/0:33,2:23:0:0,0,0	0/1:186,51:126:11.94:12,0,48	1/1:39,0:22:11.25:100,11,0	0/0:30,0:17:2.48:0,2,22	0/1:90,0:50:6.73:15,0,7	0/0:47,0:39:3.44:0,3,22	0/1:98,0:56:67.39:67,0,550	0/1:49,1:29:50.41:62,0,50	1/1:20,6:20:14.80:164,15,0
chr10	45409924	.	CAT	C	1609.45	PASS	AB=0.990;AC=33;AF=0.589;AN=56;BaseQRankSum=-1.904;DP=1838;DS;FS=4.851;HRun=0;HaplotypeScore=232.0357;InbreedingCoeff=-0.2865;MQ=23.04;MQ0=446;MQRankSum=0.428;QD=0.96;ReadPosRankSum=-2.965;VQSLOD=1.6898;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:63,0:35:0.21:2,0,0	0/1:21,0:14:6.02:61,0,6	0/1:15,0:5:4.62:26,0,5	0/1:21,0:2:11.90:14,0,12	1/1:46,2:37:2.99:24,3,0	0/0:55,0:34:2.31:0,2,7	0/1:80,4:30:28.61:69,0,29	0/1:166,0:14:24.98:122,0,25	1/1:68,0:40:5.14:96,5,0	0/1:107,2:72:99:239,0,554	0/0:29,0:22:2.84:0,3,25	1/1:67,0:37:3.70:105,4,0	0/1:74,0:42:44.57:141,0,45	1/1:61,0:33:8.40:61,8,0	1/1:75,2:35:3.69:57,4,0	0/1:57,4:43:44.47:92,0,44	0/1:80,0:51:8.48:8,0,798	0/1:46,1:27:71.52:93,0,72	0/1:54,0:17:59.79:60,0,64	0/0:34,0:22:0:0,0,0	0/1:233,0:124:13.19:25,0,13	1/1:37,0:21:10.67:93,11,0	1/1:30,0:17:0.39:1,0,0	0/1:90,0:51:5.35:17,0,5	0/0:40,2:34:2.97:0,3,21	0/1:95,0:54:99:137,0,309	0/1:51,0:31:37.33:92,0,37	1/1:24,1:20:11.05:117,11,0
chr10	45409926	.	TACAC	T	915.84	PASS	AB=0.985;AC=19;AF=0.339;AN=56;BaseQRankSum=0.700;DP=1814;DS;FS=10.546;HRun=0;HaplotypeScore=246.6539;InbreedingCoeff=0.1278;MQ=23.57;MQ0=428;MQRankSum=0.866;QD=1.13;ReadPosRankSum=0.426;VQSLOD=1.2961;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:60,3:36:0.43:0,0,2	0/0:21,0:14:1.45:0,1,21	0/0:18,0:5:6.86:0,7,48	0/0:23,0:3:7.55:0,8,63	1/1:48,0:37:0.47:2,0,0	0/0:54,0:34:3.87:0,4,25	0/0:79,0:30:2.61:0,3,48	0/0:158,0:16:20.90:0,21,198	1/1:55,11:40:16.29:205,16,0	0/1:109,0:72:99:157,0,110	0/1:27,0:20:0.03:0,0,0	0/1:60,7:37:3.49:162,0,3	0/1:69,3:40:49.13:136,0,49	1/1:54,8:34:8.80:101,9,0	0/0:78,0:37:0.49:0,0,20	0/1:61,0:44:8.33:8,0,50	0/0:79,1:52:25.73:0,26,1121	0/1:47,0:27:20.25:20,0,24	0/1:53,0:17:7.43:7,0,7	0/0:33,0:22:0:0,0,0	0/0:226,0:123:4.33:0,4,76	1/1:36,2:22:10.73:103,11,0	0/0:25,4:15:2.51:0,3,36	1/1:86,2:51:2.11:45,2,0	0/0:43,0:35:0.47:0,0,2	0/0:93,0:52:42.74:0,43,720	0/1:50,0:30:17.03:48,0,17	0/1:26,0:20:4.97:64,0,5
chr10	45410382	.	AGGT	A	9439.74	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=17.037;DP=601;FS=1.874;HRun=0;HaplotypeScore=111.0460;InbreedingCoeff=0.9980;MQ=70.76;MQ0=1;MQRankSum=-3.672;QD=35.89;ReadPosRankSum=4.806;VQSLOD=5.3382;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,108,2270	0/0:9,0:9:27.09:0,27,616	0/0:21,0:21:32.73:0,33,783	0/0:22,0:21:56.80:0,57,957	1/1:2,15:17:41.95:612,42,0	1/1:1,20:21:54.12:860,54,0	1/1:4,28:32:72.25:1206,72,0	0/0:22,0:22:57.16:0,57,1093	0/0:28,0:28:81.17:0,81,1570	1/1:0,18:18:51.11:776,51,0	1/1:1,10:11:27.02:401,27,0	0/0:24,0:24:72.23:0,72,1594	0/0:24,0:24:69.21:0,69,1396	0/0:21,0:21:57.18:0,57,1201	1/1:4,18:23:42.14:701,42,0	1/1:0,18:18:36.12:612,36,0	0/0:24,0:24:72.13:0,72,1373	1/1:1,17:17:48.16:788,48,0	1/1:2,12:14:36.02:447,36,0	1/1:2,8:10:24.03:362,24,0	1/1:1,20:21:45.09:721,45,0	0/0:16,0:16:48.11:0,48,964	0/0:23,0:23:68.98:0,69,1381	0/0:39,0:39:99:0,108,2253	1/1:4,19:23:39.08:631,39,0	0/0:24,1:25:24.42:0,24,1487	1/1:2,23:25:60.06:1018,60,0	1/1:3,9:12:18.06:306,18,0
chr10	45410864	.	C	CT	13380.66	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-18.265;DP=744;FS=2.670;HRun=2;HaplotypeScore=63.2625;InbreedingCoeff=0.9980;MQ=80.35;MQ0=0;MQRankSum=-2.410;QD=38.45;ReadPosRankSum=1.775;VQSLOD=5.5700;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:60,0:60:99:0,178,2192	0/0:8,0:8:18.06:0,18,223	0/0:26,0:26:65.40:0,65,759	0/0:25,0:25:72.11:0,72,823	1/1:0,18:18:51.17:723,51,0	1/1:2,27:29:72.24:1037,72,0	1/1:2,28:30:66.22:951,66,0	0/0:22,0:22:60.18:0,60,733	0/0:37,0:37:99:0,108,1339	1/1:1,30:31:93.29:1316,93,0	1/1:0,12:12:36.08:495,36,0	0/0:30,0:30:87.26:0,87,1066	0/0:27,0:27:75.22:0,75,914	0/0:25,0:25:72.23:0,72,892	1/1:2,26:28:72.24:1037,72,0	1/1:1,21:22:23:784,23,0	0/0:31,0:31:90.23:0,90,1085	1/1:1,16:17:45.15:648,45,0	1/1:0,22:21:60.20:860,60,0	1/1:0,25:25:75.25:1080,75,0	1/1:0,44:44:99:1771,123,0	0/0:17,0:17:48.13:0,48,582	0/0:26,0:26:75.16:0,75,880	0/0:30,0:30:90.28:0,90,1113	1/1:2,25:27:69.23:994,69,0	0/0:32,0:32:90.27:0,90,1101	1/1:0,33:33:96.32:1382,96,0	1/1:2,8:10:21.07:302,21,0
chr10	45411816	.	CA	C	9271.16	PASS	AB=0.731;AC=24;AF=0.429;AN=56;BaseQRankSum=18.586;DP=597;FS=3.707;HRun=1;HaplotypeScore=149.0924;InbreedingCoeff=0.8543;MQ=84.55;MQ0=0;MQRankSum=-6.143;QD=35.66;ReadPosRankSum=3.069;VQSLOD=4.5175;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:37:99:0,111,1749	0/0:4,0:4:12.04:0,12,189	0/0:21,0:21:59.79:0,60,915	0/0:19,0:19:22.42:0,22,800	1/1:0,18:18:42.14:586,42,0	0/0:18,0:18:54.18:0,54,863	0/0:26,0:26:78.25:0,78,1223	0/0:28,0:28:84.28:0,84,1322	0/0:31,1:32:54.39:0,54,1445	1/1:0,22:22:63.21:879,63,0	1/1:0,9:9:27.09:377,27,0	0/0:28,0:28:84.27:0,84,1317	0/0:22,0:22:66.23:0,66,1053	0/0:20,0:20:60.20:0,60,958	1/1:0,16:16:48.16:671,48,0	0/1:2,12:14:53.81:460,0,54	0/0:25,0:25:75.26:0,75,1199	1/1:0,23:23:63.21:880,63,0	1/1:0,27:27:78.26:1084,78,0	1/1:2,13:15:42.10:563,42,0	1/1:0,43:43:99:1718,123,0	0/0:11,0:11:33.11:0,33,523	0/0:14,0:14:42.14:0,42,669	0/0:31,0:31:93.30:0,93,1464	1/1:0,14:14:42.14:586,42,0	0/1:22,2:24:11.23:11,0,961	1/1:0,23:23:69.23:955,69,0	1/1:0,12:12:36.12:503,36,0
chr10	45412378	.	C	CA	17362.27	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=1.521;DP=774;FS=3.120;HRun=2;HaplotypeScore=85.7572;InbreedingCoeff=0.9999;MQ=93.39;MQ0=0;MQRankSum=-4.495;QD=40.19;ReadPosRankSum=4.589;VQSLOD=5.0838;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,47:49:99:1857,129,0	0/0:10,0:10:30.09:0,30,372	0/0:37,0:37:99:0,105,1229	0/0:30,0:30:81.19:0,81,952	1/1:0,31:31:93.31:1339,93,0	0/0:21,0:21:60.19:0,60,743	0/0:20,0:20:60.17:0,60,729	0/0:31,0:31:87.27:0,87,1069	1/1:1,31:32:90.30:1296,90,0	1/1:1,33:34:99:1407,99,0	1/1:0,22:22:66.18:927,66,0	1/1:0,27:27:81.27:1166,81,0	1/1:1,19:20:51.17:734,51,0	1/1:2,29:31:87.29:1252,87,0	1/1:0,32:32:93.31:1339,93,0	1/1:1,20:21:57.19:821,57,0	0/0:35,0:35:99:0,102,1250	1/1:0,21:21:60.20:864,60,0	0/0:33,0:33:87.27:0,87,1077	0/0:23,0:23:69.18:0,69,822	0/0:28,0:28:75.02:0,75,865	1/1:1,37:38:99:1511,105,0	1/1:0,23:23:66.08:950,66,0	1/1:1,25:26:63.21:907,63,0	1/1:1,24:25:69.23:994,69,0	0/0:26,0:26:78.25:0,78,966	0/0:25,0:25:72.18:0,72,862	0/0:23,0:23:63.20:0,63,781
chr10	45413604	.	GTGTC	G	14040.13	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=5.102;DP=710;FS=5.220;HRun=0;HaplotypeScore=153.5578;InbreedingCoeff=0.8528;MQ=62.22;MQ0=5;MQRankSum=0.374;QD=22.98;ReadPosRankSum=2.402;VQSLOD=4.6872;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:12,41:52:60.20:966,60,0	1/1:7,0:7:12:110,12,0	0/0:27,0:20:2.17:0,2,48	0/0:34,0:27:23.93:0,24,223	1/1:3,15:19:15.05:242,15,0	1/1:11,9:20:33.08:485,33,0	1/1:7,26:33:48.16:775,48,0	1/1:19,13:32:39.02:427,39,0	1/1:14,9:23:48.09:672,48,0	1/1:13,27:40:74.46:988,74,0	1/1:2,10:12:15.05:242,15,0	1/1:4,26:30:51.17:823,51,0	1/1:12,8:20:38.93:547,39,0	1/1:10,20:30:39.13:630,39,0	1/1:11,7:18:36.12:576,36,0	1/1:8,7:15:21.04:316,21,0	0/0:38,0:38:81.14:0,81,1597	1/1:6,4:10:17.53:226,18,0	1/1:14,2:15:12.04:193,12,0	1/1:12,9:21:39.07:534,39,0	1/1:41,30:71:99:1619,111,0	1/1:9,9:18:36.11:558,36,0	1/1:4,2:6:6:73,6,0	1/1:22,23:45:80.90:1192,81,0	1/1:8,7:15:27.09:433,27,0	1/1:17,7:25:42.08:544,42,0	1/1:14,6:20:36.07:508,36,0	1/1:7,5:12:27.01:365,27,0
chr10	45413632	.	CTG	C	160.55	PASS	AB=0.993;AC=22;AF=0.393;AN=56;BaseQRankSum=2.734;DP=773;FS=3.015;HRun=0;HaplotypeScore=259.5965;InbreedingCoeff=-0.1345;MQ=53.04;MQ0=9;MQRankSum=2.785;QD=0.29;ReadPosRankSum=11.302;VQSLOD=1.0314;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:50,1:50:18.99:51,19,0	0/1:11,0:11:6.06:6,0,64	0/0:34,0:18:34.35:0,34,565	0/0:38,0:22:36.12:0,36,550	0/1:25,0:25:4.11:4,0,38	0/1:21,0:21:2.50:2,0,22	0/1:37,0:37:0.03:0,0,253	0/0:29,0:29:41.57:0,42,724	1/1:21,0:21:16.51:38,17,0	0/1:38,1:39:17.96:18,0,434	0/1:14,0:14:1.30:3,0,1	0/1:34,0:34:8.70:9,0,156	0/1:21,0:21:3.63:4,0,54	0/1:28,0:28:3.24:3,0,143	0/1:24,0:24:4.30:4,0,26	0/1:16,0:16:3.21:3,0,16	0/0:40,1:41:57.73:0,58,1454	0/1:14,0:14:7.11:7,0,87	0/0:17,0:15:17.76:0,18,343	0/1:24,0:24:5.59:7,0,6	0/1:73,1:74:30.45:30,0,249	0/1:22,0:22:10.69:11,0,38	0/0:8,0:8:0.48:0,0,2	0/1:44,0:44:29.20:29,0,69	0/1:18,0:17:8.06:8,0,73	0/0:29,1:30:7.56:0,8,532	0/1:20,2:22:71.63:72,0,116	0/0:15,0:16:14.78:0,15,254
chr10	45413666	.	C	CTCTGTG	22702.11	PASS	AB=0.850;AC=49;AF=0.875;AN=56;BaseQRankSum=-0.445;DP=862;FS=0.538;HRun=0;HaplotypeScore=271.7604;InbreedingCoeff=0.7675;MQ=52.20;MQ0=8;MQRankSum=-3.332;QD=31.01;ReadPosRankSum=-2.420;VQSLOD=3.8442;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:42,9:51:11.28:1213,0,11	1/1:4,3:7:20.99:391,21,0	0/0:48,0:28:41.56:0,42,591	0/0:48,0:25:25.39:0,25,403	1/1:19,9:27:11.91:96,12,0	1/1:8,19:30:42.06:1170,42,0	1/1:24,9:32:57.03:1279,57,0	1/1:50,0:50:99:1510,102,0	1/1:6,14:24:39.01:991,39,0	1/1:28,7:36:67.92:1310,68,0	1/1:6,5:11:9:191,9,0	1/1:28,10:38:81.03:1592,81,0	1/1:8,17:27:36.09:923,36,0	1/1:22,6:28:35.97:901,36,0	1/1:7,17:25:40.92:962,41,0	1/1:6,14:23:39.12:1086,39,0	0/0:32,0:32:69.69:0,70,1363	1/1:13,3:16:35.98:667,36,0	1/1:10,12:24:44.82:859,45,0	1/1:8,18:29:14.98:344,15,0	1/1:62,1:63:24.54:529,25,0	1/1:11,21:35:30.08:651,30,0	1/1:3,11:15:3.01:77,3,0	1/1:31,9:40:16.32:777,16,0	1/1:4,15:22:24.01:604,24,0	1/1:4,31:37:99:2509,99,0	1/1:4,14:22:33.08:996,33,0	1/1:7,8:15:42.06:1075,42,0
chr10	45413676	.	G	GTGTC	9583.55	PASS	AB=0.988;AC=25;AF=0.446;AN=56;BaseQRankSum=10.596;DP=895;FS=1.947;HRun=0;HaplotypeScore=304.2139;InbreedingCoeff=-0.5973;MQ=49.07;MQ0=16;MQRankSum=-7.831;QD=13.09;ReadPosRankSum=10.666;VQSLOD=2.6962;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:52,0:53:99:512,0,108	0/1:7,0:7:5.25:197,0,5	0/0:50,0:23:52.81:0,53,644	0/0:53,0:22:45.60:0,46,703	0/0:31,0:30:5.91:0,6,324	0/1:29,0:29:50.60:454,0,51	0/1:35,0:34:99:543,0,257	0/1:51,0:51:99:446,0,520	0/1:29,0:29:73.78:443,0,74	0/1:33,0:33:96.70:630,0,97	0/1:19,0:18:20.38:20,0,221	1/1:37,0:37:16.40:617,16,0	0/1:28,0:28:30.58:381,0,31	0/1:26,2:28:75.90:481,0,76	0/1:25,0:25:52.15:344,0,52	0/1:23,1:24:7.12:531,0,7	0/0:29,0:29:72.60:0,73,1266	0/1:16,0:17:49.47:279,0,49	0/1:22,0:20:99:392,0,120	0/1:27,0:27:96.79:116,0,97	0/1:59,2:61:99:300,0,271	0/1:35,1:36:99:250,0,126	0/1:22,0:22:3.68:4,0,220	0/1:37,0:38:3.18:365,0,3	0/1:27,0:26:99:236,0,102	0/1:43,0:43:99:1101,0,208	0/1:24,0:23:73.44:453,0,73	0/1:16,0:16:26.45:488,0,26
chr10	45413678	.	G	GTC	4147.93	PASS	AB=0.990;AC=24;AF=0.429;AN=56;BaseQRankSum=12.692;DP=890;FS=4.416;HRun=0;HaplotypeScore=299.5890;InbreedingCoeff=-0.6330;MQ=48.71;MQ0=17;MQRankSum=-9.306;QD=5.92;ReadPosRankSum=6.745;VQSLOD=2.3040;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:54,0:53:99:160,0,144	0/1:7,0:7:26.03:111,0,26	0/0:51,0:23:58.89:0,59,622	0/0:55,0:22:48.17:0,48,636	0/0:31,0:30:0.86:0,1,353	0/1:30,0:30:64.10:64,0,64	0/1:34,0:33:99:275,0,296	0/1:51,0:51:99:378,0,759	0/1:30,0:30:99:177,0,122	0/1:31,0:31:99:364,0,175	0/1:20,0:19:3.09:3,0,256	0/1:33,2:35:70.91:278,0,71	0/1:28,0:28:69.48:127,0,69	0/1:29,0:29:99:174,0,115	0/1:26,0:26:79.82:80,0,88	0/1:23,1:24:13.74:165,0,14	0/0:29,0:29:81.73:0,82,1103	0/1:17,0:17:99:162,0,108	0/1:18,0:16:99:134,0,140	0/1:27,0:27:49.22:49,0,89	0/1:60,1:61:99:128,0,380	0/1:35,0:35:41.07:41,0,192	0/0:23,0:23:2.62:0,3,224	1/1:37,0:37:11.67:197,12,0	0/1:26,0:25:99:108,0,103	0/1:42,0:42:99:544,0,346	0/1:22,1:22:73.95:175,0,74	0/1:15,1:16:45.62:254,0,46
chr10	45413698	.	T	TTG	101.88	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.135;DP=924;FS=1.183;HRun=0;HaplotypeScore=274.2486;InbreedingCoeff=0.9646;MQ=49.04;MQ0=20;MQRankSum=-3.701;QD=14.55;ReadPosRankSum=-3.181;VQSLOD=2.7354;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:50:82.16:0,82,782	1/1:1,5:7:11.90:188,12,0	0/0:51,0:20:36.98:0,37,443	0/0:67,0:25:40.54:0,41,482	0/0:34,0:34:65.82:0,66,724	0/0:29,0:29:42.55:0,43,507	0/0:37,0:36:61.81:0,62,751	0/0:45,0:44:84.05:0,84,955	0/0:33,0:33:50.41:0,50,628	0/0:29,0:29:61.04:0,61,769	0/0:18,0:17:36.10:0,36,445	0/0:28,0:28:53.09:0,53,581	0/0:33,0:33:72.17:0,72,866	0/0:27,0:27:60.10:0,60,713	0/0:25,0:26:41.86:0,42,466	0/0:26,0:26:44.96:0,45,538	0/0:28,0:28:79.15:0,79,932	0/0:20,0:20:23.85:0,24,399	0/0:29,0:27:64.14:0,64,831	0/0:29,0:29:74.38:0,74,759	0/0:58,0:58:99:0,104,999	0/0:35,0:35:68.47:0,68,753	0/0:25,0:25:53.67:0,54,604	0/0:44,0:44:48.04:0,48,545	0/0:30,0:29:42.07:0,42,505	0/0:38,0:38:91.25:0,91,1152	0/0:30,0:29:51.07:0,51,616	0/0:17,0:17:30.79:0,31,399
chr10	45413899	.	C	CTG	356.39	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-0.948;DP=1071;FS=0.997;HRun=0;HaplotypeScore=170.3774;InbreedingCoeff=0.9933;MQ=65.16;MQ0=3;MQRankSum=-3.321;QD=29.70;ReadPosRankSum=0.104;VQSLOD=4.9836;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:81.09:0,81,942	1/1:3,9:12:30.08:451,30,0	0/0:50,0:45:78.64:0,79,922	0/0:52,0:50:89.76:0,90,1039	0/0:27,0:27:60.18:0,60,737	0/0:32,1:33:31.78:0,32,894	0/0:29,1:30:19.65:0,20,750	0/0:50,0:51:99:0,102,1222	0/0:40,0:40:99:0,102,1245	0/0:68,0:68:99:0,165,1990	0/0:24,0:24:69.19:0,69,828	0/0:30,0:30:81.16:0,81,965	0/0:44,0:45:99:0,120,1430	0/0:36,0:36:87.18:0,87,1030	0/0:47,0:47:99:0,120,1446	0/0:35,0:35:81.17:0,81,978	0/0:28,0:28:58.06:0,58,703	0/0:20,0:20:42.58:0,43,657	0/0:36,0:36:78.36:0,78,985	0/0:44,0:44:99:0,114,1377	0/0:70,0:71:99:0,153,1912	0/0:39,0:39:90.23:0,90,1096	0/0:31,0:31:60.17:0,60,727	0/0:44,0:43:99:0,108,1333	0/0:37,0:37:78.21:0,78,958	0/0:47,0:47:99:0,126,1555	0/0:46,0:46:99:0,108,1336	0/0:11,0:11:33.11:0,33,412
chr10	45413961	.	TC	T	10431.64	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=15.012;DP=1211;FS=7.478;HRun=1;HaplotypeScore=172.0425;InbreedingCoeff=0.9970;MQ=62.32;MQ0=12;MQRankSum=-1.334;QD=37.39;ReadPosRankSum=2.581;VQSLOD=3.7553;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,3:53:99:0,105,2151	1/1:0,9:9:24.04:313,24,0	0/0:74,0:40:93.52:0,94,1388	0/0:90,0:56:99:0,126,1815	1/1:0,50:49:99:1827,140,0	0/0:36,0:36:99:0,108,1701	0/0:37,0:37:99:0,111,1762	0/0:46,0:45:99:0,135,2153	0/0:43,0:43:99:0,123,1858	1/1:0,57:57:99:2275,168,0	1/1:0,19:19:51.17:713,51,0	0/0:32,0:32:93.32:0,93,1483	0/0:37,0:36:99:0,105,1627	0/0:43,0:43:99:0,129,2029	1/1:1,44:44:99:1791,129,0	1/1:0,36:36:90.30:1257,90,0	0/0:30,2:32:32.38:0,32,1170	1/1:4,28:32:92.90:1248,93,0	0/0:36,0:36:99:0,105,1606	0/0:39,0:39:99:0,117,1839	0/0:93,0:93:99:0,274,4232	0/0:41,0:41:99:0,99,1523	0/0:30,0:30:81.26:0,81,1265	0/0:60,1:61:99:0,168,2675	1/1:0,31:31:72.24:1007,72,0	0/0:50,3:53:15.93:0,16,2205	0/0:37,0:37:75.89:0,76,1664	0/0:16,0:16:22.81:0,23,635
chr10	45420075	.	GAGAT	G	209.16	PASS	AB=1.000;AC=5;AF=0.100;AN=50;BaseQRankSum=-2.246;DP=650;FS=8.902;HRun=0;HaplotypeScore=205.9052;InbreedingCoeff=0.3139;MQ=53.43;MQ0=11;MQRankSum=0.915;QD=2.65;ReadPosRankSum=-0.560;VQSLOD=1.1220;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:32:48.14:0,48,731	0/1:14,0:14:34.80:35,0,296	./.	./.	0/1:23,0:23:0.15:0,0,0	0/0:30,0:29:32.93:0,33,392	0/0:14,0:14:6.48:0,6,69	./.	0/0:12,0:12:3.01:0,3,45	0/0:24,0:24:20.93:0,21,206	0/0:22,0:22:2.54:0,3,13	0/0:18,0:17:12.02:0,12,203	0/0:21,0:20:2.78:0,3,17	0/0:21,0:21:12.01:0,12,133	0/0:27,0:27:2.26:0,2,31	0/1:19,0:19:0.21:1,0,0	1/1:15,8:23:18.06:273,18,0	0/0:13,0:13:3:0,3,25	0/0:29,0:27:30.03:0,30,456	0/0:33,0:33:20.89:0,21,223	0/0:17,0:17:8.79:0,9,107	0/0:27,0:27:9.02:0,9,125	0/0:24,0:24:11.60:0,12,178	0/0:25,0:24:9.02:0,9,111	0/0:21,0:21:3:0,3,38	0/0:26,0:25:33.04:0,33,534	0/0:28,0:28:20.68:0,21,191	0/0:14,0:14:8.96:0,9,111
chr10	45420099	.	T	TAGACAGACAGAC	3000.95	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=6.346;DP=607;FS=1.133;HRun=0;HaplotypeScore=274.0534;InbreedingCoeff=0.3459;MQ=45.74;MQ0=21;MQRankSum=-5.685;QD=10.17;ReadPosRankSum=3.387;VQSLOD=2.3561;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:75.22:0,75,1133	0/0:14,0:14:30.57:0,31,900	0/0:12,0:6:5.98:0,6,77	0/0:14,0:4:6.02:0,6,104	1/1:20,2:24:8.42:91,8,0	0/1:30,0:29:99:103,0,765	0/0:16,0:16:23.72:0,24,419	0/0:37,0:21:57.18:0,57,1172	0/1:18,0:18:99:105,0,280	1/1:20,1:21:54.11:1625,54,0	1/1:10,4:18:5.52:116,6,0	0/0:14,0:13:24.95:0,25,350	0/0:22,0:21:31.21:0,31,683	0/0:23,0:23:17.99:0,18,670	1/1:13,3:21:2.13:171,2,0	1/1:16,3:20:5.36:102,5,0	0/0:17,0:17:42.07:0,42,933	1/1:9,0:10:14.94:349,15,0	0/1:25,0:17:34.96:35,0,522	0/0:33,0:33:32.54:0,33,698	0/1:11,0:11:36.12:36,0,192	0/0:31,0:31:42.86:0,43,898	0/0:23,0:23:36.14:0,36,714	0/0:24,0:23:29.08:0,29,468	1/1:20,3:23:11.24:174,11,0	0/1:30,0:27:40.43:40,0,912	0/1:27,0:27:99:198,0,632	0/1:17,0:17:41.86:42,0,517
chr10	45420129	.	G	GC	442.34	PASS	AB=0.768;AC=2;AF=0.036;AN=56;BaseQRankSum=3.661;DP=606;FS=16.158;HRun=0;HaplotypeScore=234.2890;InbreedingCoeff=-0.0759;MQ=49.67;MQ0=13;MQRankSum=-4.225;QD=8.51;ReadPosRankSum=-3.502;VQSLOD=1.7363;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:84.07:0,84,895	0/0:6,0:12:18.92:0,19,234	0/0:28,0:17:31.47:0,31,421	0/0:22,0:16:33.05:0,33,396	0/0:22,0:22:2.60:0,3,30	0/0:32,0:31:75.23:0,75,996	0/0:15,0:15:21.25:0,21,285	0/1:18,6:16:79.40:189,0,79	0/0:21,0:21:15.82:0,16,241	0/0:17,0:17:48.15:0,48,620	0/0:15,0:15:2.91:0,3,39	0/0:15,0:13:27.09:0,27,372	0/0:20,0:19:36.02:0,36,501	0/0:22,0:22:36.05:0,36,477	0/0:20,0:20:2.83:0,3,37	0/0:16,0:16:8.78:0,9,114	0/0:16,0:16:23.34:0,23,336	0/0:5,0:5:5.91:0,6,58	0/0:26,0:22:57.66:0,58,786	0/0:32,0:32:10.21:0,10,350	0/0:12,0:12:14.09:0,14,238	0/0:33,0:33:47.19:0,47,596	0/0:22,0:22:36.09:0,36,499	0/0:20,0:19:20.75:0,21,277	0/0:23,0:23:1.40:0,1,71	0/1:18,10:25:99:341,0,244	0/0:28,0:28:25.47:0,25,513	0/0:24,0:24:24.31:0,24,474
chr10	45420137	.	A	AG	240.83	PASS	AB=0.899;AC=10;AF=0.179;AN=56;BaseQRankSum=6.080;DP=661;FS=8.380;HRun=0;HaplotypeScore=246.7310;InbreedingCoeff=-0.0326;MQ=48.12;MQ0=15;MQRankSum=-4.256;QD=1.14;ReadPosRankSum=-5.113;VQSLOD=-0.2788;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:36,5:41:99:150,0,624	0/0:13,0:13:3.10:0,3,123	0/0:36,0:18:51.10:0,51,632	0/0:32,0:20:45.12:0,45,594	0/1:21,6:26:5.13:5,0,18	0/0:33,0:32:79.36:0,79,953	0/0:12,0:12:16.31:0,16,213	0/0:31,0:24:65.93:0,66,785	0/0:22,0:22:8.18:0,8,241	0/1:18,2:19:68.79:69,0,164	0/0:13,5:18:0.99:0,1,19	0/0:17,0:15:29.48:0,29,419	0/0:20,0:19:35.92:0,36,479	0/0:21,0:21:32.96:0,33,414	0/1:11,6:18:29.26:29,0,48	0/0:14,4:16:4.75:0,5,122	0/0:18,0:18:36.28:0,36,607	0/1:5,1:6:11.89:30,0,12	0/0:27,0:23:59.44:0,59,742	0/1:31,0:31:3.36:3,0,154	0/0:11,0:11:17.97:0,18,231	0/0:37,0:37:52.60:0,53,680	0/0:22,0:22:36.11:0,36,487	0/1:17,0:16:9.83:10,0,167	1/1:18,3:21:4.79:38,5,0	0/1:31,0:28:41.17:41,0,422	0/0:33,0:33:19.30:0,19,576	0/0:28,0:28:19.01:0,19,468
chr10	45420164	.	AAC	A	1053.43	PASS	AB=0.705;AC=5;AF=0.089;AN=56;BaseQRankSum=-1.505;DP=697;FS=1.305;HRun=0;HaplotypeScore=208.5238;InbreedingCoeff=0.4123;MQ=48.36;MQ0=20;MQRankSum=-3.371;QD=13.51;ReadPosRankSum=-2.684;VQSLOD=2.7168;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:45:57.21:0,57,523	1/1:12,0:12:0.47:1,0,0	0/0:47,0:18:41:0,41,499	0/0:36,0:19:9.89:0,10,111	0/0:23,0:22:2.84:0,3,43	0/0:9,0:34:51.19:0,51,536	0/0:4,0:13:8.03:0,8,56	0/1:17,13:30:7.47:396,0,7	0/0:5,0:29:22.62:0,23,173	0/0:23,0:20:27.78:0,28,226	0/0:16,0:16:2.42:0,2,31	0/0:5,0:23:32.99:0,33,290	0/0:8,0:22:9.87:0,10,163	0/0:4,0:18:18:0,18,161	0/0:14,0:14:5.58:0,6,62	0/0:19,0:17:8.34:0,8,73	0/0:18,1:19:8.78:0,9,661	0/0:1,0:1:2.94:0,3,18	0/0:28,0:26:44.58:0,45,353	0/0:4,0:28:35.45:0,35,183	0/0:15,0:15:10.60:0,11,76	0/0:10,0:29:35.83:0,36,341	0/0:10,0:25:17.80:0,18,229	0/0:5,0:15:15:0,15,132	0/0:20,0:20:0.71:0,1,5	1/1:11,24:31:24.78:760,25,0	0/0:5,0:40:48.94:0,49,339	0/0:7,0:27:34.66:0,35,263
chr10	45420230	.	A	AGAAACAGG	17250.96	PASS	AB=0.531;AC=19;AF=0.339;AN=56;BaseQRankSum=-4.879;DP=575;FS=17.861;HRun=0;HaplotypeScore=151.1329;InbreedingCoeff=0.9096;MQ=75.93;MQ0=1;MQRankSum=-14.785;QD=113.49;ReadPosRankSum=0.464;VQSLOD=5.0740;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:78.24:0,78,2205	1/1:1,5:7:18.03:714,18,0	0/0:22,0:19:51.09:0,51,1133	0/0:39,0:39:92.75:0,93,2280	1/1:1,20:21:51.18:2128,51,0	0/0:28,0:28:72.25:0,72,2074	0/0:15,0:15:30.10:0,30,909	1/1:8,7:14:42.14:1672,42,0	0/0:18,0:18:42.14:0,42,1108	1/1:7,15:24:69.24:2868,69,0	1/1:2,9:11:30.10:1287,30,0	0/0:25,0:25:57.20:0,57,1660	0/0:21,0:20:48.16:0,48,1314	0/0:21,0:21:48.62:0,49,1388	1/1:2,11:15:36.12:1554,36,0	0/1:2,15:17:39.62:2120,0,40	0/0:22,0:22:63.22:0,63,1853	1/1:0,3:4:9.03:416,9,0	0/0:20,0:19:54.19:0,54,1596	0/0:25,0:25:75.26:0,75,2203	0/0:18,0:18:51.18:0,51,1501	0/0:18,0:18:54.08:0,54,1415	0/0:31,0:31:81.28:0,81,2410	0/0:16,0:14:30.04:0,30,767	1/1:1,10:11:33.11:1414,33,0	1/1:3,19:23:69.24:3078,69,0	0/0:32,0:32:54.05:0,54,1501	0/0:17,0:17:36.12:0,36,986
chr10	45420839	.	GA	G	1195.81	PASS	AB=0.835;AC=29;AF=0.537;AN=54;BaseQRankSum=-5.200;DP=313;FS=1.187;HRun=13;HaplotypeScore=48.4337;InbreedingCoeff=0.5136;MQ=62.11;MQ0=21;MQRankSum=0.769;QD=6.87;ReadPosRankSum=1.381;VQSLOD=1.8310;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:19,8:26:12.46:216,12,0	./.	0/1:19,0:10:26.62:30,0,27	0/1:15,0:7:6.34:6,0,65	0/0:2,0:4:5.68:0,6,28	0/1:4,3:5:31.80:32,0,46	1/1:3,3:6:5.93:44,6,0	0/0:27,0:24:30.60:0,31,293	1/1:2,5:6:2.55:75,3,0	0/0:3,0:10:20.52:0,21,115	0/0:4,0:7:6.62:0,7,30	1/1:6,1:7:7.51:48,8,0	1/1:0,6:5:11.93:88,12,0	1/1:2,5:7:14.91:109,15,0	0/0:12,0:14:26.09:0,26,159	0/0:1,0:7:17.04:0,17,85	0/0:29,0:26:56.95:0,57,521	0/0:5,0:11:19.72:0,20,97	1/1:7,9:15:9.16:216,9,0	1/1:2,2:3:5.96:43,6,0	1/1:0,13:13:29.83:219,30,0	1/1:4,0:3:5.97:43,6,0	0/1:2,4:6:3.55:72,0,4	1/1:9,2:7:5.78:44,6,0	0/0:7,0:10:19.27:0,19,86	0/0:16,0:14:30.85:0,31,185	1/1:6,4:10:11.71:87,12,0	0/1:6,1:2:15.90:16,0,23
chr10	45421030	.	T	TAATA	4552.65	PASS	AB=1.000;AC=43;AF=0.935;AN=46;BaseQRankSum=1.052;DP=246;FS=21.947;HRun=0;HaplotypeScore=54.3299;InbreedingCoeff=0.2992;MQ=51.35;MQ0=15;MQRankSum=-2.634;QD=21.47;ReadPosRankSum=-3.389;VQSLOD=2.1079;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,13:16:30.10:708,30,0	1/1:3,0:4:3.01:52,3,0	./.	0/1:12,0:2:0:0,0,0	./.	1/1:2,15:18:39.13:942,39,0	1/1:1,2:3:6.02:145,6,0	1/1:34,0:20:21.07:329,21,0	1/1:2,2:4:3.01:73,3,0	1/1:5,0:5:6.01:78,6,0	1/1:7,0:7:3.01:34,3,0	./.	1/1:4,2:7:3.01:73,3,0	1/1:4,3:7:6.02:145,6,0	1/1:5,0:5:3:28,3,0	1/1:3,0:3:6.02:105,6,0	0/0:12,0:12:24.08:0,24,388	1/1:7,0:10:21.07:356,21,0	1/1:16,0:13:18.05:272,18,0	1/1:4,0:4:3.01:46,3,0	./.	./.	1/1:2,2:4:6.02:145,6,0	1/1:5,0:5:3.01:72,3,0	1/1:4,0:9:18.06:295,18,0	1/1:8,0:9:6.02:109,6,0	1/1:10,0:10:12.04:182,12,0	1/1:16,0:16:24.08:365,24,0
chr10	45422229	.	C	CA	6999.07	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=3.332;DP=535;FS=6.886;HRun=2;HaplotypeScore=89.3244;InbreedingCoeff=0.9982;MQ=65.75;MQ0=0;MQRankSum=-4.962;QD=33.98;ReadPosRankSum=-1.029;VQSLOD=4.3658;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:44.69:0,45,934	1/1:0,10:10:27.09:389,27,0	0/0:13,0:12:33.10:0,33,396	0/0:15,0:14:29.25:0,29,363	1/1:3,22:24:51.17:734,51,0	0/0:19,0:19:54.17:0,54,665	0/0:14,0:14:42.13:0,42,520	1/1:5,18:15:36.09:455,36,0	0/0:16,0:16:39.12:0,39,483	1/1:0,34:33:99:1398,99,0	1/1:1,24:24:66.09:877,66,0	0/0:17,0:17:48.15:0,48,594	0/0:14,0:14:36.11:0,36,446	0/0:15,0:15:42.13:0,42,521	1/1:1,19:20:51.16:718,51,0	1/1:1,19:19:51.09:689,51,0	0/0:25,0:25:72.23:0,72,892	1/1:1,15:16:39.13:560,39,0	0/0:6,0:6:18.06:0,18,223	0/0:27,0:27:78.25:0,78,967	0/0:12,0:12:36.11:0,36,445	0/0:23,0:23:66.21:0,66,818	0/0:28,0:28:72.23:0,72,892	0/0:20,0:20:42.13:0,42,521	1/1:1,13:14:33.11:470,33,0	1/1:1,18:18:51.15:710,51,0	0/0:28,0:28:75.22:0,75,916	0/0:9,0:9:27.08:0,27,334
chr10	45422265	.	TGAA	T	2673.40	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=13.333;DP=505;FS=24.425;HRun=0;HaplotypeScore=142.3359;InbreedingCoeff=0.9026;MQ=66.69;MQ0=11;MQRankSum=-8.807;QD=18.96;ReadPosRankSum=0.674;VQSLOD=1.6703;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:72.16:0,72,1337	0/0:6,0:6:15.01:0,15,176	0/0:20,0:13:20.56:0,21,361	0/0:28,0:21:25.71:0,26,399	1/1:6,6:12:24.47:266,24,0	0/0:20,0:19:48.10:0,48,913	0/0:12,0:12:30.10:0,30,597	0/1:25,0:24:2.98:3,0,110	0/0:18,0:17:45.04:0,45,808	1/1:6,16:22:54.16:671,54,0	1/1:10,10:18:36.48:411,36,0	0/0:19,0:19:48.12:0,48,902	0/0:10,0:9:24.03:0,24,428	0/0:15,0:15:27.09:0,27,544	1/1:10,4:14:28.58:286,29,0	1/1:8,13:21:51.12:601,51,0	0/0:25,0:24:59.47:0,59,988	1/1:7,7:13:24.04:293,24,0	0/0:12,0:11:21.04:0,21,359	0/0:22,0:21:45.09:0,45,850	0/0:13,0:13:33.06:0,33,613	0/0:20,0:20:51.17:0,51,1005	0/0:23,0:23:60.19:0,60,1142	0/0:18,0:17:42.14:0,42,828	1/1:6,7:12:30.01:339,30,0	0/0:14,0:14:2.93:0,3,31	0/0:29,0:28:63.18:0,63,1156	0/0:11,0:10:27.05:0,27,481
chr10	45422280	.	AGAGGAAGAGGAAGAG	A	5359.22	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=12.820;DP=520;FS=26.971;HRun=0;HaplotypeScore=222.6315;InbreedingCoeff=0.7916;MQ=55.34;MQ0=60;MQRankSum=-5.590;QD=31.34;ReadPosRankSum=1.148;VQSLOD=2.4590;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:27:75.23:0,75,1552	1/1:5,0:5:9.47:81,9,0	0/0:16,0:9:23.52:0,24,314	0/0:21,0:14:27.65:0,28,468	1/1:9,0:9:20.95:308,21,0	0/0:23,0:19:57.15:0,57,1140	0/0:14,0:13:39.11:0,39,788	1/1:2,14:14:41.96:517,42,0	0/0:25,0:17:45.01:0,45,959	1/1:20,0:18:54.04:974,54,0	1/1:15,0:15:39.03:607,39,0	0/0:20,0:18:51.10:0,51,1087	0/0:14,0:9:27.07:0,27,534	0/0:16,0:16:39.12:0,39,801	1/1:12,0:10:23.84:340,24,0	1/1:19,0:17:51.08:844,51,0	0/1:26,0:24:11.69:12,0,1029	0/1:17,0:13:86.37:389,0,86	0/0:13,0:10:29.81:0,30,478	0/0:20,0:18:48.13:0,48,1018	0/0:14,0:13:36.12:0,36,780	0/0:21,0:19:51.14:0,51,1103	0/0:30,0:28:81.22:0,81,1582	0/0:24,0:15:42.12:0,42,865	0/1:14,0:12:1.21:452,0,1	1/1:14,0:11:33.11:836,33,0	0/0:29,0:27:63.10:0,63,1354	0/0:19,0:13:24.08:0,24,579
chr10	45422414	.	AGTT	A	2267.94	PASS	AB=0.917;AC=23;AF=0.411;AN=56;BaseQRankSum=-2.021;DP=583;FS=12.712;HRun=0;HaplotypeScore=88.1213;InbreedingCoeff=0.6159;MQ=58.82;MQ0=2;MQRankSum=2.002;QD=7.87;ReadPosRankSum=-1.996;VQSLOD=1.2882;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:9,22:31:1.91:198,0,2	0/0:13,0:13:2.15:0,2,292	0/0:20,0:13:15.04:0,15,249	0/0:27,0:17:33.05:0,33,480	0/1:13,0:13:14.03:14,0,304	1/1:3,22:25:33.11:475,33,0	1/1:5,20:26:42.11:582,42,0	0/1:27,0:26:1.06:1,0,218	1/1:8,18:25:12.04:173,12,0	0/0:18,0:18:42.09:0,42,476	0/0:15,0:15:27.09:0,27,353	1/1:2,16:18:12.04:172,12,0	1/1:3,13:17:18.06:259,18,0	1/1:1,14:15:9.03:130,9,0	0/0:19,0:19:42.12:0,42,535	0/0:25,0:24:51.17:0,51,730	0/0:31,0:31:66.21:0,66,1300	0/1:18,0:17:12.82:13,0,293	0/0:17,0:16:18.50:0,18,215	0/0:15,0:15:24.08:0,24,479	0/0:25,0:25:45.15:0,45,915	1/1:10,1:11:18.06:259,18,0	1/1:3,11:14:5.82:86,6,0	1/1:6,16:21:6.02:86,6,0	0/0:18,0:17:18.08:0,18,498	0/1:25,0:25:18.39:18,0,385	0/0:34,0:34:46.89:0,47,1273	0/0:18,0:18:42.08:0,42,742
chr10	45422597	.	GA	G	4083.33	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=3.418;DP=600;FS=14.028;HRun=2;HaplotypeScore=85.4007;InbreedingCoeff=0.9998;MQ=79.76;MQ0=0;MQRankSum=0.181;QD=34.31;ReadPosRankSum=0.013;VQSLOD=2.2740;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:90.29:0,90,1328	0/0:12,0:12:36.12:0,36,540	0/0:14,0:14:40:0,40,565	0/0:19,0:19:47.52:0,48,668	0/0:25,0:25:63.21:0,63,936	0/0:25,0:25:72.24:0,72,1078	0/0:22,0:22:66.22:0,66,989	0/0:21,0:21:63.20:0,63,909	0/0:15,0:15:42.13:0,42,611	0/0:27,0:27:78.22:0,78,1143	0/0:21,0:21:57.16:0,57,828	0/0:27,0:27:72.24:0,72,1078	0/0:15,0:15:42.14:0,42,629	0/0:19,0:19:54.17:0,54,789	0/0:11,0:10:30.10:0,30,450	0/0:19,0:19:57.19:0,57,854	0/0:20,0:20:57.19:0,57,854	0/0:28,0:28:72.20:0,72,1052	1/1:1,17:18:51.16:656,51,0	1/1:0,23:23:63.20:818,63,0	1/1:0,42:42:99:1519,117,0	0/0:18,0:18:54.18:0,54,809	0/0:23,0:23:69.23:0,69,1032	0/0:21,0:21:60.17:0,60,841	0/0:27,0:27:75.25:0,75,1121	0/0:20,0:19:54.18:0,54,810	1/1:1,18:19:51.17:662,51,0	1/1:0,17:17:33.11:429,33,0
chr10	45422690	.	GCACGCACACACACACACACA	G	2276.66	PASS	AB=0.522;AC=11;AF=0.212;AN=52;BaseQRankSum=8.659;DP=474;FS=18.763;HRun=0;HaplotypeScore=222.1195;InbreedingCoeff=0.5791;MQ=54.52;MQ0=7;MQRankSum=-4.709;QD=24.48;ReadPosRankSum=0.641;VQSLOD=1.1728;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:75.11:0,75,5142	0/0:2,0:10:6.46:0,6,59	0/0:11,0:1:3:0,3,27	0/0:16,0:6:8.20:0,8,77	0/1:0,11:11:0:0,0,0	0/0:18,0:18:45.10:0,45,2531	0/0:29,0:28:57.30:0,57,4506	0/1:3,0:14:70.08:70,0,399	0/0:14,0:13:27.08:0,27,2151	1/1:1,14:15:30.01:1111,30,0	./.	0/0:25,0:25:51.63:0,52,4041	0/0:15,0:15:39.11:0,39,2975	0/0:14,0:14:36.11:0,36,2639	./.	1/1:0,7:7:6.02:257,6,0	0/0:30,0:30:31.43:0,31,1655	1/1:0,12:12:11.87:503,12,0	0/0:16,0:16:36.08:0,36,1654	0/0:12,0:12:11.99:0,12,475	0/0:31,0:30:42.76:0,43,1924	0/0:12,0:12:21.53:0,22,1737	0/0:15,0:14:29.98:0,30,1859	0/0:27,0:26:51.15:0,51,3813	1/1:0,12:12:3.01:164,3,0	0/1:1,0:20:99:318,0,178	0/0:17,0:17:14.84:0,15,728	0/0:11,0:11:21.07:0,21,1652
chr10	45422694	.	GCA	G	465.40	PASS	AB=0.917;AC=22;AF=0.478;AN=46;BaseQRankSum=6.811;DP=467;FS=9.462;HRun=0;HaplotypeScore=121.7651;InbreedingCoeff=0.2043;MQ=54.08;MQ0=7;MQRankSum=-5.069;QD=1.80;ReadPosRankSum=1.469;VQSLOD=1.9648;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,1:38:36.83:0,37,578	1/1:8,0:8:5.62:29,6,0	./.	./.	./.	0/0:19,0:19:21.04:0,21,275	0/1:26,2:27:8.43:8,0,464	1/1:15,0:13:8.72:49,9,0	0/1:12,1:12:10.57:11,0,290	1/1:14,0:14:17.04:84,17,0	./.	0/1:27,0:27:5.53:6,0,468	0/0:15,0:15:5.51:0,6,366	0/1:13,1:14:10.58:11,0,298	./.	1/1:7,0:7:2.84:14,3,0	0/1:8,20:29:1.94:135,0,2	1/1:12,0:12:7.72:34,8,0	0/1:15,0:15:10.30:10,0,49	0/0:12,0:12:1.25:0,1,3	0/0:29,0:28:5.65:0,6,65	0/0:12,0:12:18.06:0,18,255	0/1:17,0:16:38.39:38,0,143	0/1:26,1:26:9.83:10,0,368	1/1:12,0:12:2.84:14,3,0	1/1:19,0:20:31.50:166,31,0	0/0:17,0:17:5.92:0,6,40	0/0:8,0:8:13.21:0,13,66
chr10	45422730	.	AGT	A	1108.51	PASS	AB=0.949;AC=26;AF=0.520;AN=50;BaseQRankSum=6.872;DP=416;FS=67.884;HRun=0;HaplotypeScore=97.6103;InbreedingCoeff=0.4450;MQ=42.04;MQ0=26;MQRankSum=-5.718;QD=4.95;ReadPosRankSum=-0.794;VQSLOD=-0.2153;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:35.84:0,36,430	1/1:6,0:6:5.79:39,6,0	./.	0/0:13,0:4:11.33:0,11,79	0/1:10,0:8:0:0,0,0	0/1:16,0:15:2.91:3,0,206	0/1:31,0:29:30.33:30,0,271	1/1:13,0:10:25.16:145,25,0	0/0:13,1:13:23.73:0,24,246	1/1:10,0:10:29.64:201,30,0	./.	0/0:28,0:28:4.36:0,4,269	0/0:17,0:17:19.84:0,20,344	0/0:16,0:15:27.16:0,27,300	./.	1/1:9,0:9:2.92:17,3,0	0/1:23,0:22:5.99:6,0,107	1/1:4,0:4:10.94:67,11,0	1/1:8,8:11:5.38:168,5,0	1/1:3,12:14:2.37:8,2,0	1/1:8,12:16:6.02:90,6,0	0/1:13,0:13:7.03:7,0,126	0/0:14,0:12:13.26:0,13,135	0/0:18,0:17:3.30:0,3,243	1/1:12,0:11:2.92:17,3,0	1/1:17,0:15:43.34:277,43,0	0/0:3,10:12:5.94:0,6,42	0/1:5,4:9:2.99:200,0,3
chr10	45422732	.	TGA	T	96.95	PASS	AB=0.989;AC=11;AF=0.250;AN=44;BaseQRankSum=4.455;DP=414;FS=1.106;HRun=0;HaplotypeScore=101.3719;InbreedingCoeff=0.1876;MQ=41.28;MQ0=29;MQRankSum=-2.758;QD=0.72;ReadPosRankSum=-1.103;VQSLOD=1.4074;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:26.32:0,26,290	0/1:6,0:6:0.13:0,0,0	./.	0/0:13,0:4:8.92:0,9,82	./.	0/0:16,0:15:16.19:0,16,182	0/1:30,1:29:22.55:23,0,86	0/0:14,0:10:8.77:0,9,52	0/0:14,0:13:9.03:0,9,143	0/1:11,0:10:0.50:5,0,0	./.	0/0:25,1:27:0.26:0,0,166	0/0:16,0:16:24.85:0,25,298	0/0:16,0:15:15.51:0,16,210	./.	0/0:9,0:9:0.89:0,1,2	0/1:21,1:21:25.15:25,0,73	0/1:4,0:4:0.01:0,0,0	0/1:16,0:11:11.18:43,0,11	1/1:15,0:14:1.55:4,2,0	1/1:21,0:17:5.98:46,6,0	0/0:13,0:13:6.91:0,7,94	0/0:11,1:10:8.90:0,9,109	0/0:16,0:15:14.60:0,15,223	./.	0/0:18,0:15:5.09:0,5,20	./.	0/1:8,0:8:18.99:65,0,19
chr10	45422774	.	TGAGA	T	208.94	PASS	AB=1.000;AC=18;AF=0.391;AN=46;BaseQRankSum=-0.761;DP=342;FS=3.109;HRun=0;HaplotypeScore=62.7165;InbreedingCoeff=0.3039;MQ=37.40;MQ0=66;MQRankSum=1.543;QD=1.53;ReadPosRankSum=0.275;VQSLOD=1.4701;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:19:2.22:44,2,0	./.	./.	./.	0/1:7,0:6:0.14:0,0,0	0/0:17,0:15:8.31:0,8,100	0/0:18,0:16:5.76:0,6,95	0/0:18,0:2:4.17:0,4,20	1/1:13,0:12:10.73:111,11,0	1/1:22,0:9:0.18:2,0,0	1/1:17,0:9:2.74:13,3,0	./.	0/0:11,0:9:5.95:0,6,44	0/1:10,0:9:24.17:67,0,24	1/1:5,0:3:0.47:1,0,0	0/1:4,0:4:1.13:1,0,19	0/0:24,0:21:25.70:0,26,258	0/0:3,0:3:0.89:0,1,2	0/0:24,0:14:11.07:0,11,164	1/1:5,0:5:0.47:1,0,0	0/0:11,0:8:0.47:0,0,1	1/1:11,5:14:2.39:47,2,0	./.	0/1:17,0:14:9.48:39,0,9	0/0:7,0:6:0.42:0,0,1	0/0:7,0:5:8.94:0,9,77	0/0:13,0:12:2.80:0,3,13	0/0:8,0:6:3:0,3,58
chr10	45423249	.	TCTC	T	190.87	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.325;DP=787;FS=1.534;HRun=0;HaplotypeScore=131.0209;InbreedingCoeff=0.9917;MQ=84.33;MQ0=0;MQRankSum=-3.275;QD=19.09;ReadPosRankSum=0.850;VQSLOD=3.7277;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:63,0:63:99:0,172,3699	1/1:2,8:10:18.06:281,18,0	0/0:30,0:31:70.44:0,70,1323	0/0:28,0:28:75.22:0,75,1463	0/0:29,0:29:84.27:0,84,1776	0/0:28,0:28:81.26:0,81,1690	0/0:34,0:34:93.30:0,93,1929	0/0:33,0:33:81.27:0,81,1677	0/0:37,0:37:99:0,102,2107	0/0:26,0:26:66.23:0,66,1396	0/0:13,0:13:39.13:0,39,842	0/0:26,0:26:69.24:0,69,1492	0/0:22,0:22:57.20:0,57,1211	0/0:39,0:39:99:0,102,2177	0/0:31,0:31:87.30:0,87,1849	0/0:26,0:26:72.23:0,72,1488	0/0:35,0:35:99:0,99,2083	0/0:34,0:34:90.31:0,90,1916	0/0:20,0:20:51.15:0,51,1061	0/0:15,0:15:39.61:0,40,844	0/0:53,0:53:99:0,151,3195	0/0:25,0:25:69.24:0,69,1490	0/0:20,0:20:57.20:0,57,1223	0/0:18,0:18:44.75:0,45,951	0/0:16,0:16:39.09:0,39,798	0/0:30,0:30:81.28:0,81,1751	0/0:30,0:28:84.29:0,84,1797	0/0:15,0:15:45.13:0,45,931
chr10	45424314	.	CAA	C	8538.78	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-3.286;DP=609;FS=15.676;HRun=12;HaplotypeScore=98.2694;InbreedingCoeff=0.9493;MQ=64.21;MQ0=4;MQRankSum=2.626;QD=19.23;ReadPosRankSum=5.054;VQSLOD=2.3431;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,36:40:55.25:818,55,0	1/1:3,0:3:2.74:12,3,0	0/0:24,0:15:17.92:0,18,167	0/0:20,0:12:18:0,18,180	1/1:6,24:30:62.77:640,63,0	1/1:2,14:16:39.07:397,39,0	1/1:4,16:20:29.79:286,30,0	1/1:4,12:16:29.99:297,30,0	1/1:12,8:20:17.93:182,18,0	1/1:8,27:35:72:756,72,0	1/1:5,20:25:57.01:566,57,0	1/1:2,22:24:34.79:417,35,0	1/1:1,13:13:24.03:244,24,0	1/1:4,19:24:21.70:456,22,0	1/1:2,19:22:50.84:500,51,0	1/1:0,16:16:39.09:397,39,0	0/0:33,0:35:83.59:0,84,1031	1/1:6,15:19:33:336,33,0	0/0:4,1:19:7.94:0,8,128	0/0:3,0:15:20.49:0,20,91	0/0:4,0:18:32.91:0,33,125	1/1:1,26:27:63.01:627,63,0	1/1:1,14:17:26.44:308,26,0	1/1:5,17:23:41.82:408,42,0	1/1:5,22:28:44.73:497,45,0	1/1:5,17:21:39.02:396,39,0	0/0:4,0:26:48.88:0,49,179	0/0:2,0:8:13.72:0,14,47
chr10	45424748	.	AAAGG	A	706.05	PASS	AB=0.875;AC=4;AF=0.071;AN=56;BaseQRankSum=0.999;DP=644;FS=1.784;HRun=0;HaplotypeScore=124.7694;InbreedingCoeff=0.4080;MQ=56.79;MQ0=8;MQRankSum=0.807;QD=8.21;ReadPosRankSum=1.411;VQSLOD=3.0347;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:46.40:0,46,993	0/0:13,0:10:13.06:0,13,70	0/0:30,0:11:6.02:0,6,145	0/1:39,0:13:0.84:1,0,182	0/0:19,0:19:27.09:0,27,594	0/0:15,0:15:21.07:0,21,468	0/0:23,0:23:21.07:0,21,488	1/1:20,0:18:12.04:185,12,0	0/0:21,0:21:27.09:0,27,574	0/0:38,0:38:72.71:0,73,1592	0/0:20,0:20:48.12:0,48,1046	0/0:20,0:20:33.11:0,33,709	0/0:23,0:23:33.11:0,33,748	0/0:19,0:19:27.09:0,27,583	0/0:26,0:26:54.16:0,54,1134	0/0:15,0:14:30.10:0,30,685	0/0:32,0:32:78.20:0,78,1821	0/0:27,0:27:30.09:0,30,673	0/0:14,0:13:27.05:0,27,589	0/0:36,0:36:78.27:0,78,1831	0/0:12,0:12:6:0,6,109	0/0:29,0:29:66.18:0,66,1485	0/0:20,0:20:33.11:0,33,748	0/0:27,0:27:9.47:0,9,615	0/0:24,0:22:24.08:0,24,541	0/1:18,9:27:21.71:620,0,22	0/0:17,0:17:24.08:0,24,476	0/0:7,0:6:9.03:0,9,188
chr10	45424767	.	G	GGA	1260.41	PASS	AB=1.000;AC=14;AF=0.250;AN=56;BaseQRankSum=3.682;DP=635;FS=8.386;HRun=0;HaplotypeScore=113.3233;InbreedingCoeff=0.0142;MQ=53.10;MQ0=12;MQRankSum=-1.512;QD=4.26;ReadPosRankSum=-5.510;VQSLOD=-0.7443;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:12.12:0,12,554	0/0:12,0:9:26.67:0,27,271	0/0:29,0:4:9.03:0,9,132	0/0:35,0:10:2.64:0,3,207	0/0:17,0:17:27.07:0,27,379	0/0:14,0:14:21.04:0,21,231	0/1:18,0:18:54.49:54,0,255	1/1:18,3:14:14.84:175,15,0	0/1:18,0:18:11.21:11,0,284	0/1:40,0:40:13.10:13,0,947	0/0:18,0:18:47.77:0,48,651	0/1:23,0:23:38.13:38,0,320	0/1:23,0:23:29.33:29,0,351	0/1:27,0:27:6.86:7,0,261	0/0:28,0:28:59.50:0,60,590	0/0:19,0:18:35.68:0,36,366	0/0:29,0:29:87.23:0,87,1252	0/0:23,0:23:30.07:0,30,402	0/1:13,0:12:50.60:51,0,368	0/1:36,0:36:94.56:95,0,1013	0/0:15,0:14:6.01:0,6,73	0/1:29,0:29:42.41:42,0,819	0/0:17,0:17:32.78:0,33,378	0/1:25,0:25:37.17:37,0,343	0/0:26,0:24:21.56:0,22,282	1/1:12,11:23:23.98:871,24,0	0/0:18,0:18:23.65:0,24,281	0/0:11,0:9:8.71:0,9,49
chr10	45424773	.	A	AGAAGG	12040.07	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-3.048;DP=640;FS=2.547;HRun=0;HaplotypeScore=102.3572;InbreedingCoeff=0.7587;MQ=53.26;MQ0=15;MQRankSum=0.193;QD=22.55;ReadPosRankSum=0.862;VQSLOD=4.7598;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:11,14:26:15.70:633,16,0	0/0:4,0:8:17.85:0,18,115	0/0:32,0:4:4.26:0,4,59	0/0:33,0:9:6.02:0,6,99	1/1:7,0:20:12.04:185,12,0	1/1:2,12:15:15.05:434,15,0	1/1:5,13:20:8.93:248,9,0	1/1:20,0:13:21.06:306,21,0	1/1:7,11:19:21.07:534,21,0	1/1:15,0:39:55.22:665,55,0	1/1:11,0:19:18.04:285,18,0	1/1:6,17:23:30.06:781,30,0	1/1:9,15:24:27.09:731,27,0	1/1:7,18:27:18.06:495,18,0	1/1:10,0:27:33.08:654,33,0	1/1:7,0:18:21.04:386,21,0	0/0:28,0:28:54.18:0,54,918	1/1:8,0:20:3.01:66,3,0	1/1:5,9:13:30.09:605,30,0	1/1:10,28:38:63.21:1413,63,0	1/1:2,12:14:2.80:87,3,0	1/1:12,17:28:42.06:933,42,0	1/1:6,10:16:16.24:511,16,0	1/1:9,13:22:14.54:419,15,0	1/1:7,1:27:12.01:218,12,0	1/1:26,0:26:54.14:931,54,0	1/1:3,12:17:9.03:260,9,0	1/1:2,8:8:9.03:260,9,0
chr10	45424775	.	AAG	A	80.67	PASS	AB=0.632;AC=1;AF=0.018;AN=56;BaseQRankSum=4.576;DP=643;FS=7.534;HRun=0;HaplotypeScore=122.4509;InbreedingCoeff=-0.0326;MQ=53.17;MQ0=16;MQRankSum=-3.455;QD=6.72;ReadPosRankSum=0.292;VQSLOD=2.9005;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:49.98:0,50,767	0/1:5,7:8:36.44:155,0,36	0/0:34,0:6:11.94:0,12,198	0/0:31,0:8:4.71:0,5,311	0/0:22,0:22:33.05:0,33,504	0/0:16,0:16:24.06:0,24,305	0/0:20,0:20:24.08:0,24,402	0/0:19,0:12:30.10:0,30,520	0/0:20,0:20:36.06:0,36,534	0/0:40,0:40:96.24:0,96,1493	0/0:20,0:20:47.97:0,48,751	0/0:22,0:22:36:0,36,440	0/0:26,0:26:51.15:0,51,722	0/0:26,0:27:33.03:0,33,443	0/0:28,0:28:60.12:0,60,828	0/0:19,0:18:36.12:0,36,535	0/0:26,0:26:75.21:0,75,1461	0/0:20,0:20:27:0,27,371	0/0:15,0:13:38.91:0,39,615	0/0:38,0:38:99:0,99,1615	0/0:15,0:14:3.01:0,3,39	0/0:28,0:27:66.19:0,66,1062	0/0:16,0:16:36.10:0,36,529	0/0:23,0:23:26.83:0,27,506	0/0:29,0:27:29.98:0,30,483	0/0:24,0:24:70.66:0,71,1064	0/0:17,0:17:18.03:0,18,209	0/0:10,0:8:9.03:0,9,117
chr10	45424781	.	AG	A	81.59	PASS	AB=0.571;AC=1;AF=0.018;AN=56;BaseQRankSum=4.349;DP=639;FS=6.765;HRun=3;HaplotypeScore=119.9103;InbreedingCoeff=-0.0137;MQ=53.19;MQ0=15;MQRankSum=-4.337;QD=6.80;ReadPosRankSum=0.212;VQSLOD=0.3341;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:38.10:0,38,445	0/1:3,9:8:17.25:156,0,17	0/0:33,0:7:18.05:0,18,225	0/0:30,0:7:0.72:0,1,157	0/0:20,0:20:36.08:0,36,455	0/0:18,0:18:29.92:0,30,299	0/0:21,0:21:27.04:0,27,334	0/0:21,0:14:36.09:0,36,464	0/0:20,0:20:35.97:0,36,408	0/0:40,0:40:87.09:0,87,1082	0/0:20,0:20:45.07:0,45,567	0/0:21,0:21:32.87:0,33,312	0/0:25,0:26:50.91:0,51,558	0/0:24,0:24:20.94:0,21,201	0/0:27,0:27:53.82:0,54,553	0/0:20,0:19:32.89:0,33,337	0/0:24,0:24:69.23:0,69,987	0/0:20,0:20:18.01:0,18,213	0/0:16,0:14:36.05:0,36,440	0/0:39,0:39:99:0,99,1139	0/0:16,0:15:5.80:0,6,63	0/0:27,0:26:56.97:0,57,600	0/0:14,0:14:23.89:0,24,203	0/0:22,0:23:29.02:0,29,360	0/0:31,0:29:30.01:0,30,355	0/0:22,0:22:63.11:0,63,805	0/0:18,0:18:20.94:0,21,199	0/0:10,0:8:8.93:0,9,64
chr10	45424786	.	AG	A	129.06	PASS	AB=0.565;AC=1;AF=0.018;AN=56;BaseQRankSum=4.631;DP=648;FS=4.013;HRun=3;HaplotypeScore=125.9007;InbreedingCoeff=0.0265;MQ=52.68;MQ0=17;MQRankSum=-4.261;QD=9.93;ReadPosRankSum=-0.897;VQSLOD=1.0534;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:33.36:0,33,388	0/1:3,10:9:13.43:203,0,13	0/0:35,0:8:21.02:0,21,270	0/0:35,0:7:2.48:0,2,158	0/0:22,0:22:38.64:0,39,427	0/0:19,0:19:29.82:0,30,295	0/0:24,0:24:36.05:0,36,440	0/0:23,0:17:45.14:0,45,588	0/0:21,0:21:38.77:0,39,423	0/0:32,0:32:71.90:0,72,857	0/0:19,0:19:39.02:0,39,434	0/0:22,0:22:32.89:0,33,301	0/0:26,0:26:44.88:0,45,455	0/0:25,0:25:26.95:0,27,282	0/0:27,0:27:49.94:0,50,564	0/0:19,0:18:35.90:0,36,374	0/0:24,0:24:72.20:0,72,986	0/0:16,0:16:15.02:0,15,186	0/0:18,0:16:42.06:0,42,509	0/0:41,0:41:99:0,108,1097	0/0:17,0:16:8.79:0,9,106	0/0:26,0:25:60:0,60,608	0/0:14,0:14:26.90:0,27,245	0/0:22,0:22:29.03:0,29,334	0/0:31,0:29:36.01:0,36,412	0/0:22,0:22:66.12:0,66,824	0/0:17,0:17:17.96:0,18,193	0/0:13,0:11:17.53:0,18,118
chr10	45424821	.	G	GAGAA	7097.49	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=-7.507;DP=613;FS=8.756;HRun=0;HaplotypeScore=141.4889;InbreedingCoeff=0.8850;MQ=55.81;MQ0=11;MQRankSum=-2.092;QD=41.26;ReadPosRankSum=0.252;VQSLOD=5.1486;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:9,11:20:39.09:912,39,0	0/1:10,0:7:8.34:8,0,47	0/0:45,0:14:18.03:0,18,245	0/0:49,0:17:15.10:0,15,174	0/0:19,0:19:45.08:0,45,755	0/0:18,0:18:33.11:0,33,559	0/0:23,0:23:42.13:0,42,672	0/0:28,0:28:51.17:0,51,831	1/1:11,6:17:42.09:879,42,0	0/0:33,0:32:69.11:0,69,1159	0/0:8,0:8:15.05:0,15,238	1/1:10,9:19:33.07:749,33,0	1/1:17,11:28:57.20:1329,57,0	1/1:13,13:26:51.13:1162,51,0	0/0:27,0:27:51.17:0,51,860	0/0:22,0:22:48.16:0,48,839	0/0:16,0:16:31.30:0,31,432	0/0:14,0:14:27.09:0,27,461	0/0:20,0:20:54.14:0,54,813	0/0:25,0:25:54.18:0,54,878	0/0:13,0:13:2.63:0,3,287	1/1:9,12:21:39.09:872,39,0	1/1:6,5:11:21.06:435,21,0	1/1:10,10:20:12.33:751,12,0	0/0:21,0:20:24.08:0,24,396	0/0:21,0:21:57.18:0,57,926	0/0:24,0:24:51.13:0,51,795	0/0:15,0:15:33.07:0,33,493
chr10	45424837	.	GAGAA	G	4698.67	PASS	AB=0.762;AC=15;AF=0.268;AN=56;BaseQRankSum=3.625;DP=609;FS=0.420;HRun=0;HaplotypeScore=132.9434;InbreedingCoeff=0.8732;MQ=55.62;MQ0=10;MQRankSum=0.503;QD=33.56;ReadPosRankSum=3.564;VQSLOD=4.8916;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:54.15:0,54,1027	1/1:5,0:4:1.35:16,1,0	0/0:41,0:8:12.04:0,12,264	0/0:43,0:20:17.75:0,18,159	1/1:11,6:17:33.11:560,33,0	0/0:19,0:19:45.08:0,45,944	0/0:23,0:23:60.10:0,60,1089	0/0:31,0:30:72.23:0,72,1515	0/0:23,0:23:63.17:0,63,1238	1/1:20,12:31:71.99:1189,72,0	1/1:3,4:7:18.06:266,18,0	0/0:17,0:17:42.09:0,42,820	0/0:22,0:22:57.17:0,57,1281	0/0:31,0:31:63.17:0,63,1417	1/1:9,11:20:57.19:944,57,0	1/1:10,10:20:47.97:814,48,0	0/0:19,0:19:36.07:0,36,631	0/1:11,5:16:7.90:458,0,8	0/0:25,0:23:39.13:0,39,819	0/0:21,0:21:57.19:0,57,1316	0/0:17,0:17:27.16:0,27,653	0/0:21,0:21:40.45:0,40,828	0/0:9,0:9:24.02:0,24,455	0/0:20,0:20:50.93:0,51,987	1/1:16,6:22:29.91:451,30,0	0/0:24,0:23:54.19:0,54,1276	0/0:25,0:25:54.18:0,54,1289	0/0:16,0:16:27.09:0,27,671
chr10	45427591	.	AAC	A	3929.03	PASS	AB=0.886;AC=20;AF=0.357;AN=56;BaseQRankSum=1.307;DP=949;FS=6.637;HRun=0;HaplotypeScore=147.9250;InbreedingCoeff=0.5060;MQ=65.29;MQ0=13;MQRankSum=3.651;QD=9.56;ReadPosRankSum=1.276;VQSLOD=3.2211;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:66:76.98:0,77,672	0/0:15,0:15:2.84:0,3,14	0/1:39,2:27:40.76:41,0,239	0/0:44,0:27:22.63:0,23,325	1/1:8,16:25:41.90:428,42,0	0/0:20,0:20:27.07:0,27,401	0/1:30,6:36:30.23:30,0,879	0/1:31,1:32:0.43:0,0,749	0/0:14,0:45:55.79:0,56,471	1/1:9,18:27:51.13:585,51,0	1/1:6,10:16:24.07:280,24,0	0/0:10,0:28:37.72:0,38,307	0/0:8,0:26:41.04:0,41,387	0/0:10,0:38:38.73:0,39,334	1/1:9,23:34:56.83:626,57,0	1/1:11,14:29:47.47:478,47,0	0/1:27,8:36:99:150,0,751	1/1:7,21:29:37.68:507,38,0	0/0:21,0:20:9.76:0,10,484	0/1:19,3:23:4.17:4,0,558	0/0:77,3:80:6.76:0,7,2032	0/0:10,0:27:26.80:0,27,200	0/0:7,0:27:21.03:0,21,242	0/0:21,0:67:80.99:0,81,777	1/1:3,28:35:68.53:724,69,0	0/1:40,6:47:75.10:75,0,1120	0/0:18,2:20:9.90:0,10,569	0/0:12,1:13:0.87:0,1,445
chr10	45428662	.	ACACC	A	465.39	PASS	AB=0.907;AC=7;AF=0.130;AN=54;BaseQRankSum=0.511;DP=499;FS=4.514;HRun=0;HaplotypeScore=81.8667;InbreedingCoeff=0.0384;MQ=61.47;MQ0=17;MQRankSum=-0.255;QD=4.85;ReadPosRankSum=3.175;VQSLOD=1.3320;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:26:47.95:0,48,452	0/0:3,0:3:6:0,6,54	0/0:18,0:8:16.99:0,17,178	0/0:17,0:11:23.11:0,23,223	0/1:11,0:11:25.80:103,0,26	0/1:14,0:14:0.43:0,0,154	0/0:26,0:26:59.48:0,59,513	0/0:18,0:16:39.37:0,39,304	0/0:20,0:20:41.53:0,42,378	0/1:15,0:14:22.87:129,0,23	./.	0/0:27,0:27:65.71:0,66,704	0/0:27,0:26:59.81:0,60,599	0/0:22,0:22:41.85:0,42,368	1/1:17,0:17:0.51:150,1,0	0/1:17,0:16:15.39:146,0,15	0/0:34,0:34:81.26:0,81,878	0/1:3,19:21:17.94:53,0,18	0/0:13,0:10:18.57:0,19,161	0/0:2,0:2:3:0,3,26	0/0:41,0:38:67.13:0,67,548	0/0:9,0:9:16.05:0,16,131	0/0:13,0:13:32.96:0,33,328	0/0:25,0:25:51.03:0,51,597	0/0:15,0:12:2.99:0,3,24	0/0:21,0:21:47.74:0,48,402	0/0:11,0:11:26.99:0,27,231	0/0:11,0:11:12.49:0,12,191
chr10	45428664	.	ACC	A	723.79	PASS	AB=0.833;AC=12;AF=0.222;AN=54;BaseQRankSum=0.294;DP=520;FS=7.991;HRun=3;HaplotypeScore=69.0192;InbreedingCoeff=0.7834;MQ=61.58;MQ0=17;MQRankSum=1.136;QD=6.96;ReadPosRankSum=0.528;VQSLOD=-0.3059;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:33.38:0,33,444	0/0:2,0:2:6:0,6,54	0/0:18,0:8:16.99:0,17,178	0/0:17,0:11:23.12:0,23,223	1/1:12,0:12:14.98:124,15,0	0/0:18,0:18:35.94:0,36,289	0/0:28,0:28:65.52:0,66,566	0/0:19,0:17:40.45:0,40,328	0/0:23,0:23:44.32:0,44,386	1/1:13,0:12:12.80:187,13,0	./.	0/0:28,0:28:5.01:0,5,510	0/0:28,0:27:37.42:0,37,534	0/0:23,0:23:45.35:0,45,401	1/1:17,0:17:36.42:298,36,0	1/1:16,0:15:25.98:199,26,0	0/0:35,0:35:61.90:0,62,643	1/1:21,1:21:6.01:72,6,0	0/0:14,0:11:20.78:0,21,187	0/0:4,0:4:8.99:0,9,76	0/0:49,0:46:87.82:0,88,723	0/1:10,0:10:6.89:7,0,116	0/0:14,0:14:29.42:0,29,303	0/0:23,0:23:48.03:0,48,521	0/1:7,7:11:0:0,0,0	0/0:18,0:18:50.72:0,51,429	0/0:12,0:12:29.98:0,30,257	0/0:12,0:12:26.60:0,27,229
chr10	45431311	.	G	GGGACAA	5799.88	PASS	AB=0.905;AC=17;AF=0.304;AN=56;BaseQRankSum=7.245;DP=524;FS=9.680;HRun=0;HaplotypeScore=119.4346;InbreedingCoeff=0.8592;MQ=86.76;MQ0=0;MQRankSum=-11.681;QD=43.61;ReadPosRankSum=-0.202;VQSLOD=4.3652;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,120,2694	1/1:1,3:5:6.02:210,6,0	0/0:17,0:18:46.91:0,47,1083	0/0:21,0:21:51.05:0,51,912	1/1:5,7:12:17.91:301,18,0	0/0:14,0:14:42.12:0,42,880	0/0:31,0:31:93.25:0,93,1886	0/0:19,0:19:48.15:0,48,1038	0/0:17,0:17:51.15:0,51,1109	1/1:1,10:12:23.64:554,24,0	1/1:0,5:5:5.95:98,6,0	0/0:15,0:15:39.11:0,39,843	0/0:15,0:15:39.12:0,39,890	0/0:23,0:23:60.19:0,60,1393	1/1:2,18:22:35.74:1120,36,0	1/1:0,14:15:21.07:746,21,0	0/0:39,0:38:99:0,102,2218	1/1:2,28:32:72.25:2463,72,0	0/0:17,0:17:51.06:0,51,1052	0/0:4,0:4:12.01:0,12,194	0/0:45,0:45:99:0,122,2858	0/0:8,0:8:21.07:0,21,474	0/0:6,0:6:15.05:0,15,360	0/0:41,0:41:99:0,123,2732	1/1:1,10:11:11.95:255,12,0	0/1:17,2:19:53.54:54,0,1106	0/0:12,0:12:33.11:0,33,787	0/0:5,0:5:12.03:0,12,243
chr10	45431657	.	G	GGAAA	12106.33	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-10.014;DP=730;FS=1.059;HRun=0;HaplotypeScore=117.8909;InbreedingCoeff=0.9996;MQ=86.86;MQ0=1;MQRankSum=-4.926;QD=67.26;ReadPosRankSum=2.079;VQSLOD=6.8848;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:56:99:0,163,3135	1/1:3,8:11:30.06:745,30,0	0/0:19,0:19:48.16:0,48,901	0/0:40,0:40:99:0,105,1891	1/1:2,19:22:54.10:1330,54,0	0/0:23,0:23:66.23:0,66,1279	0/0:34,0:34:96.29:0,96,1761	0/0:39,0:38:99:0,111,2055	0/0:28,0:28:84.29:0,84,1615	1/1:7,18:26:78.27:2084,78,0	1/1:2,15:17:42.10:1084,42,0	0/0:36,0:36:99:0,105,1917	0/0:24,0:24:72.25:0,72,1386	0/0:26,0:26:78.27:0,78,1512	1/1:4,29:33:78.22:2062,78,0	1/1:2,19:22:63.17:1644,63,0	0/0:31,0:31:87.28:0,87,1652	1/1:1,28:31:75.22:1991,75,0	0/0:20,0:20:60.19:0,60,1083	0/0:11,0:11:27.08:0,27,489	0/0:54,0:53:99:0,154,2918	0/0:11,0:11:30.10:0,30,582	0/0:17,0:17:39.13:0,39,756	0/0:26,0:26:75.19:0,75,1380	1/1:1,17:18:45.11:1166,45,0	0/0:30,0:30:87.28:0,87,1624	0/0:13,0:13:39.13:0,39,755	0/0:12,0:12:36.10:0,36,654
chr10	45431658	.	G	GAA	4216.20	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=17.803;DP=724;FS=1.457;HRun=1;HaplotypeScore=115.0652;InbreedingCoeff=0.9993;MQ=86.57;MQ0=1;MQRankSum=-5.064;QD=24.23;ReadPosRankSum=2.579;VQSLOD=3.6383;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:57:99:0,163,2479	1/1:9,1:10:29.96:265,30,0	0/0:19,0:19:48.16:0,48,731	0/0:39,0:39:99:0,108,1579	1/1:22,0:22:32.07:444,32,0	0/0:22,0:22:66.22:0,66,1010	0/0:33,0:33:96.30:0,96,1425	0/0:40,0:39:99:0,114,1705	0/0:28,0:28:84.29:0,84,1284	1/1:24,2:26:78.04:753,78,0	1/1:15,1:16:42.02:393,42,0	0/0:36,0:36:99:0,105,1541	0/0:24,0:24:72.24:0,72,1101	0/0:26,0:26:78.26:0,78,1194	1/1:31,0:31:57.05:692,57,0	1/1:22,0:22:63.01:576,63,0	0/0:31,0:31:90.27:0,90,1334	1/1:30,0:30:75.06:703,75,0	0/0:21,0:21:60.19:0,60,880	0/0:11,0:11:27.07:0,27,390	0/0:53,0:52:99:0,154,2317	0/0:12,0:12:30.10:0,30,459	0/0:16,0:16:39.13:0,39,597	0/0:26,0:26:75.23:0,75,1122	1/1:17,0:17:25.05:391,25,0	0/0:30,0:30:87.28:0,87,1294	0/0:14,0:14:39.13:0,39,597	0/0:12,0:12:36.10:0,36,526
chr10	45433315	.	CG	C	3701.70	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=10.700;DP=727;FS=5.441;HRun=3;HaplotypeScore=72.3315;InbreedingCoeff=0.9145;MQ=78.73;MQ0=0;MQRankSum=-1.575;QD=30.10;ReadPosRankSum=1.934;VQSLOD=3.3128;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:36:99:0,108,1515	0/0:12,0:12:36.12:0,36,518	0/0:21,0:21:47.90:0,48,606	0/1:14,0:14:3.83:4,0,262	0/0:21,0:21:60.17:0,60,825	0/0:26,0:26:78.25:0,78,1100	0/0:34,0:34:99:0,102,1395	0/0:24,0:24:72.21:0,72,973	0/0:29,0:29:78.24:0,78,1079	0/0:33,0:33:84.27:0,84,1168	0/0:11,0:11:33.10:0,33,455	0/0:35,0:35:99:0,99,1343	0/0:30,0:30:90.27:0,90,1250	0/0:25,0:25:75.23:0,75,1042	0/0:36,0:36:99:0,105,1472	0/0:25,0:25:75.24:0,75,1061	0/0:49,0:49:99:0,144,2049	0/0:30,1:31:90.19:0,90,1211	1/1:0,14:14:42.12:504,42,0	1/1:0,16:16:48.15:595,48,0	1/1:3,51:54:99:1782,144,0	0/0:20,0:20:60.17:0,60,824	0/0:13,0:13:39.12:0,39,543	0/0:37,0:36:99:0,105,1510	0/0:24,0:24:72.20:0,72,982	0/0:31,0:31:90.26:0,90,1225	1/1:1,17:18:51.16:631,51,0	1/1:0,7:7:15.05:186,15,0
chr10	45433521	.	CCA	C	10345.71	PASS	AB=1.000;AC=48;AF=0.857;AN=56;BaseQRankSum=3.003;DP=666;FS=10.325;HRun=0;HaplotypeScore=135.6404;InbreedingCoeff=0.6977;MQ=90.00;MQ0=0;MQRankSum=-7.054;QD=17.84;ReadPosRankSum=3.905;VQSLOD=4.8257;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,30:33:78.23:1157,78,0	1/1:16,0:16:19.44:59,19,0	0/0:28,0:28:77.98:0,78,1064	0/0:25,0:25:44.37:0,44,830	1/1:20,0:20:16.05:95,16,0	0/1:18,0:18:99:122,0,111	0/1:30,0:30:21.54:22,0,278	1/1:20,1:21:53.21:362,53,0	1/1:1,40:41:99:1512,99,0	1/1:29,0:29:19.92:168,20,0	1/1:18,0:18:16.65:68,17,0	1/1:1,34:35:84.09:1255,84,0	1/1:9,9:18:53.99:645,54,0	1/1:0,21:21:54.18:822,54,0	1/1:32,0:32:52.81:188,53,0	1/1:19,0:19:35.45:121,35,0	0/0:33,0:33:96.27:0,96,1599	1/1:18,0:18:35.20:107,35,0	1/1:15,0:15:39.61:210,40,0	1/1:21,0:21:25.04:94,25,0	1/1:37,3:40:91.38:552,91,0	1/1:0,17:17:30.10:447,30,0	1/1:0,16:16:36.12:549,36,0	1/1:3,28:31:72.24:1101,72,0	1/1:18,0:18:26.94:112,27,0	1/1:24,3:27:58.96:388,59,0	1/1:17,0:17:34.81:123,35,0	1/1:9,0:9:15.20:67,15,0
chr10	45433522	.	CA	C	10628.41	PASS	AB=0.956;AC=48;AF=0.857;AN=56;BaseQRankSum=7.131;DP=653;FS=7.326;HRun=1;HaplotypeScore=120.6705;InbreedingCoeff=0.7160;MQ=88.94;MQ0=0;MQRankSum=-6.655;QD=18.61;ReadPosRankSum=3.346;VQSLOD=4.9552;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:31,1:32:76.86:504,77,0	1/1:15,0:15:37.62:219,38,0	0/0:26,0:26:70.81:0,71,865	0/0:23,1:24:33.97:0,34,626	1/1:20,0:20:50.60:303,51,0	0/1:17,1:18:10.52:180,0,11	0/1:27,1:28:24.88:130,0,25	1/1:1,19:20:56.89:569,57,0	1/1:40,1:41:97.90:653,98,0	1/1:29,0:29:70.40:479,70,0	1/1:18,0:18:44.56:251,45,0	1/1:35,0:35:82.70:546,83,0	1/1:17,1:18:53.56:385,54,0	1/1:21,0:21:53.37:354,53,0	1/1:31,0:31:86.52:544,87,0	1/1:19,0:19:47.27:305,47,0	0/0:32,0:32:96.26:0,96,1273	1/1:18,0:18:52.82:328,53,0	1/1:0,15:15:44.95:519,45,0	1/1:0,21:21:30.05:393,30,0	1/1:19,22:41:99:1227,105,0	1/1:17,0:17:29.45:190,29,0	1/1:16,0:16:35.59:236,36,0	1/1:28,1:29:71.21:476,71,0	1/1:17,0:17:46.51:284,47,0	1/1:6,20:26:68.87:730,69,0	1/1:1,16:17:45.10:592,45,0	1/1:0,9:9:18.05:233,18,0
chr10	45433527	.	C	CA	6158.10	PASS	AB=0.939;AC=17;AF=0.304;AN=56;BaseQRankSum=-7.842;DP=674;FS=2.910;HRun=0;HaplotypeScore=140.8392;InbreedingCoeff=0.9206;MQ=87.60;MQ0=0;MQRankSum=-2.496;QD=29.89;ReadPosRankSum=3.638;VQSLOD=4.5669;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:72.19:0,72,699	1/1:1,0:17:39.10:199,39,0	0/0:26,0:26:68.90:0,69,796	0/0:22,0:22:59.61:0,60,709	1/1:1,16:18:51.17:730,51,0	0/0:13,0:13:32.97:0,33,355	0/0:29,0:29:74.99:0,75,818	0/0:25,0:25:57.39:0,57,493	0/0:40,0:40:97.39:0,97,880	1/1:1,31:32:90.20:1205,90,0	1/1:2,19:21:48.16:697,48,0	0/0:35,0:35:83.94:0,84,756	0/0:17,0:17:44.91:0,45,382	0/0:23,0:23:59.98:0,60,535	1/1:0,32:32:87.29:1266,87,0	1/1:0,18:18:45.15:657,45,0	0/0:33,0:33:96.27:0,96,1275	1/1:1,19:20:54.18:786,54,0	0/0:18,0:18:41.90:0,42,358	0/0:20,0:20:50.67:0,51,402	0/0:40,0:40:99:0,105,935	0/0:19,0:19:28.04:0,28,300	0/0:16,0:16:39.03:0,39,358	0/0:31,0:31:75.08:0,75,696	1/1:1,14:17:42.14:607,42,0	0/1:29,2:31:9.76:10,0,571	0/0:19,0:19:50.86:0,51,425	0/0:8,0:8:15:0,15,133
chr10	45434000	.	C	CAGGCGCCGTCTCTTA	24890.73	PASS	AB=0.817;AC=16;AF=0.296;AN=54;BaseQRankSum=-4.284;DP=676;FS=10.013;HRun=0;HaplotypeScore=286.3905;InbreedingCoeff=0.8192;MQ=77.82;MQ0=0;MQRankSum=-17.321;QD=130.32;ReadPosRankSum=-2.121;VQSLOD=3.4199;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:84.26:0,84,3390	1/1:4,3:10:18.06:1051,18,0	0/0:21,0:21:57.16:0,57,2252	0/0:16,0:16:39.12:0,39,1424	1/1:8,5:14:18.80:824,19,0	0/0:16,0:16:39.13:0,39,1525	0/0:48,0:48:99:0,135,5325	0/0:26,0:26:72.25:0,72,2977	0/0:29,0:29:84.27:0,84,3504	1/1:18,9:29:72.23:4585,72,0	1/1:9,4:14:26.41:1376,26,0	0/0:36,0:36:96.32:0,96,4136	0/0:23,0:23:69.17:0,69,2687	0/0:24,0:24:60.19:0,60,2483	1/1:8,14:27:60.21:4114,60,0	0/1:11,13:26:61.73:4277,0,62	0/0:39,0:39:99:0,111,4664	1/1:21,12:36:87.30:5372,87,0	0/0:18,0:18:54.19:0,54,2393	0/0:13,0:13:36.11:0,36,1437	0/0:71,0:71:99:0,205,8309	0/0:9,0:9:27.09:0,27,1028	0/0:13,0:13:36.12:0,36,1524	0/0:35,0:35:99:0,102,4305	1/1:8,10:18:54.18:3061,54,0	0/1:17,0:17:99:230,0,1307	0/0:19,0:18:57.20:0,57,2427	./.
chr10	45436262	.	AACCC	A	104.91	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=1.771;DP=743;FS=0.000;HRun=0;HaplotypeScore=133.8035;InbreedingCoeff=0.9351;MQ=84.08;MQ0=0;MQRankSum=-2.278;QD=26.23;ReadPosRankSum=-0.136;VQSLOD=3.4625;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,117,3292	1/1:0,4:4:9.03:188,9,0	0/0:26,0:26:75.25:0,75,1991	0/0:17,0:17:45.07:0,45,1166	0/0:18,0:18:54.17:0,54,1461	0/0:18,0:18:54.19:0,54,1525	0/0:35,0:35:99:0,102,2882	0/0:20,0:20:60.21:0,60,1680	0/0:42,0:42:99:0,126,3498	0/0:29,0:29:87.30:0,87,2512	0/0:17,0:17:51.17:0,51,1364	0/0:27,0:27:75.24:0,75,2094	0/0:25,0:25:75.26:0,75,2117	0/0:28,0:28:84.29:0,84,2433	0/0:29,0:29:87.30:0,87,2485	0/0:29,0:29:87.30:0,87,2471	0/0:43,0:43:99:0,129,3611	0/0:37,0:37:99:0,111,3086	0/0:22,0:22:66.21:0,66,1828	0/0:19,0:19:57.18:0,57,1572	0/0:62,0:62:99:0,187,5290	0/0:19,0:19:57.20:0,57,1635	0/0:14,0:14:42.14:0,42,1189	0/0:35,0:35:99:0,105,3042	0/0:20,0:20:60.21:0,60,1737	0/0:36,0:36:99:0,108,3121	0/0:26,0:26:78.27:0,78,2259	0/0:7,0:7:21.07:0,21,606
chr10	45438156	.	AT	A	995.76	PASS	AB=0.975;AC=22;AF=0.478;AN=46;BaseQRankSum=-3.567;DP=381;FS=2.613;HRun=10;HaplotypeScore=37.6296;InbreedingCoeff=0.5862;MQ=33.96;MQ0=171;MQRankSum=0.208;QD=5.76;ReadPosRankSum=0.968;VQSLOD=0.1920;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:3:6.02:0,6,66	0/0:6,0:5:11.99:0,12,117	0/0:6,0:2:3.01:0,3,30	./.	1/1:5,14:7:6:52,6,0	0/0:12,0:9:3.01:0,3,33	./.	./.	0/0:15,0:12:9.02:0,9,99	1/1:1,15:9:23.98:208,24,0	1/1:1,4:1:3:26,3,0	0/0:13,0:5:6.02:0,6,66	0/0:6,1:2:0:0,0,0	0/1:12,0:8:0:1,0,0	1/1:1,13:7:12:104,12,0	0/0:4,12:6:0:0,0,0	0/0:27,1:7:6.02:0,6,66	./.	1/1:2,7:3:6:52,6,0	1/1:2,13:8:20.99:182,21,0	./.	0/0:14,0:11:15.04:0,15,165	0/1:18,1:12:13.98:14,0,88	0/0:11,0:4:6.02:0,6,66	1/1:4,8:11:11.85:104,12,0	1/1:4,20:12:23.94:201,24,0	1/1:7,14:19:17.99:156,18,0	1/1:0,7:3:6:52,6,0
chr10	45438186	.	A	AATC	543.43	PASS	AC=12;AF=0.353;AN=34;BaseQRankSum=-3.955;DP=393;FS=2.439;HRun=0;HaplotypeScore=29.1001;InbreedingCoeff=0.5805;MQ=29.33;MQ0=194;MQRankSum=-2.250;QD=6.18;ReadPosRankSum=0.333;VQSLOD=1.4472;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,14:3:6.02:133,6,0	0/0:8,0:4:9.03:0,9,147	./.	0/0:8,0:2:6.02:0,6,84	./.	0/0:14,0:6:3.01:0,3,37	./.	./.	1/1:4,14:10:9.03:200,9,0	0/0:19,0:10:24.08:0,24,392	./.	1/1:4,12:5:3.01:67,3,0	0/0:3,4:2:0:0,0,0	1/1:2,13:6:2.88:67,3,0	./.	./.	0/0:26,0:8:6.02:0,6,98	./.	./.	0/0:18,0:9:21.07:0,21,326	./.	1/1:2,10:9:3.01:67,3,0	./.	1/1:1,7:2:6.02:133,6,0	0/0:8,0:6:9.03:0,9,146	0/0:20,0:7:21.07:0,21,343	0/0:19,0:11:5.92:0,6,98	0/0:10,0:5:2.98:0,3,49
chr10	45439458	.	TTTTTTTTTC	T	4202.84	PASS	AB=1.000;AC=23;AF=0.460;AN=50;BaseQRankSum=3.111;DP=342;FS=7.951;HRun=0;HaplotypeScore=62.9977;InbreedingCoeff=0.6748;MQ=69.54;MQ0=65;MQRankSum=-3.843;QD=26.27;ReadPosRankSum=2.328;VQSLOD=1.6546;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:11:9.03:0,9,321	0/0:11,0:10:20.40:0,20,760	0/0:32,0:11:17.13:0,17,268	0/1:24,0:13:1.77:2,0,111	1/1:4,14:12:18.02:380,18,0	0/0:13,0:11:3.01:0,3,122	./.	0/0:22,0:4:6.02:0,6,140	0/0:6,0:5:3.01:0,3,122	1/1:0,11:10:27.06:683,27,0	1/1:0,20:15:21.07:499,21,0	0/0:5,0:3:6.02:0,6,252	0/0:2,0:1:0.89:0,1,2	0/0:7,0:4:6.02:0,6,235	1/1:0,7:7:12.04:331,12,0	1/1:2,6:8:15.04:414,15,0	0/0:22,0:9:3.01:0,3,139	1/1:3,8:8:15.05:389,15,0	1/1:4,6:7:17.99:373,18,0	1/1:3,24:14:24.08:607,24,0	1/1:2,1:1:3.01:59,3,0	0/0:4,0:2:3.01:0,3,80	0/0:10,0:7:6.49:0,6,201	./.	1/1:2,12:12:14.88:382,15,0	0/0:15,0:13:33.11:0,33,1225	1/1:2,5:6:2.59:82,3,0	./.
chr10	45440208	.	T	TC	860.49	PASS	AB=0.902;AC=11;AF=0.196;AN=56;BaseQRankSum=-2.476;DP=574;FS=14.322;HRun=0;HaplotypeScore=115.0720;InbreedingCoeff=0.2847;MQ=48.52;MQ0=27;MQRankSum=4.605;QD=4.89;ReadPosRankSum=1.856;VQSLOD=2.8226;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:32,0:30:28.13:225,0,28	0/0:10,0:10:28.07:0,28,183	0/0:23,0:2:5.98:0,6,54	0/1:25,0:8:4.69:5,0,70	0/0:25,0:23:38.74:0,39,290	0/0:17,0:16:35.31:0,35,251	0/0:18,0:18:44.02:0,44,281	0/0:21,0:21:43.23:0,43,368	0/1:24,0:24:6.03:150,0,6	0/0:19,0:18:40.78:0,41,312	0/0:21,0:20:50.42:0,50,394	0/1:14,0:13:7.21:107,0,7	1/1:17,0:17:12.24:250,12,0	0/1:16,0:14:10.59:133,0,11	0/0:23,0:23:50.82:0,51,406	0/0:18,0:18:35.73:0,36,269	0/0:29,0:29:66.06:0,66,450	0/0:22,0:20:21.64:0,22,196	0/0:27,0:25:64.59:0,65,502	0/0:20,0:19:41.48:0,41,325	0/0:15,0:13:28.42:0,28,195	0/1:8,6:15:36.91:37,0,67	0/1:8,9:18:4.08:4,0,60	1/1:13,1:13:14.21:102,14,0	0/0:22,0:21:35.94:0,36,270	0/0:23,0:23:41.93:0,42,341	0/0:32,0:31:80.98:0,81,613	0/0:11,0:9:20.93:0,21,165
chr10	45440739	.	GGGTT	G	4890.53	PASS	AB=0.757;AC=16;AF=0.286;AN=56;BaseQRankSum=4.156;DP=687;FS=1.357;HRun=0;HaplotypeScore=110.0743;InbreedingCoeff=0.8053;MQ=52.12;MQ0=48;MQRankSum=3.534;QD=23.18;ReadPosRankSum=4.343;VQSLOD=4.6962;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,29:36:52.24:1025,52,0	0/0:9,0:9:15.03:0,15,329	0/0:35,0:10:18.03:0,18,278	0/0:43,0:13:14.96:0,15,162	0/0:26,0:24:49.03:0,49,1075	0/0:12,0:12:10.80:0,11,645	0/0:19,0:15:30.08:0,30,632	0/0:32,0:24:54.11:0,54,1006	0/1:5,18:23:38.90:542,0,39	0/0:27,0:26:45.15:0,45,1055	0/0:22,0:21:57.16:0,57,1368	1/1:4,10:14:11.04:419,11,0	1/1:2,14:16:24.08:406,24,0	1/1:6,20:26:42.14:733,42,0	0/0:27,0:25:66.02:0,66,1393	0/1:19,1:18:10.45:10,0,721	0/0:41,0:38:84.26:0,84,2062	0/0:23,0:23:54.84:0,55,1387	0/0:19,0:15:27.08:0,27,634	0/0:14,0:13:30.10:0,30,754	0/0:60,0:50:99:0,111,2572	1/1:5,14:18:27.08:413,27,0	1/1:4,13:16:18.06:308,18,0	1/1:6,33:37:46.87:1034,47,0	0/0:15,0:14:38.46:0,38,785	0/0:33,0:29:72.20:0,72,1539	0/0:14,0:13:39.13:0,39,930	0/0:5,0:5:12.04:0,12,279
chr10	45440795	.	GGGTT	G	582.89	PASS	AB=0.869;AC=9;AF=0.188;AN=48;BaseQRankSum=2.118;DP=444;FS=3.427;HRun=0;HaplotypeScore=73.0382;InbreedingCoeff=-0.0101;MQ=41.99;MQ0=82;MQRankSum=1.102;QD=6.34;ReadPosRankSum=1.352;VQSLOD=1.8281;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:16,2:16:52.85:93,0,53	0/0:2,0:2:6.02:0,6,151	./.	./.	0/0:10,0:6:6.02:0,6,125	0/0:7,0:7:15.05:0,15,328	./.	0/0:40,0:24:57.20:0,57,1281	1/1:5,5:10:15.05:261,15,0	0/0:14,0:10:24.07:0,24,497	0/0:19,0:16:21.36:0,21,269	0/1:6,1:7:46.53:47,0,71	0/1:4,1:5:43.51:44,0,72	0/1:10,1:10:37.54:38,0,84	0/0:13,0:9:21.01:0,21,347	0/0:14,0:12:27.88:0,28,449	0/0:34,0:31:72.25:0,72,1791	0/0:22,0:16:23.86:0,24,215	0/0:17,0:2:3.01:0,3,52	0/0:13,0:9:11.98:0,12,199	0/0:34,0:16:23.91:0,24,358	0/1:6,2:6:40.52:41,0,208	0/1:9,1:10:20.97:47,0,21	0/1:19,4:21:99:152,0,218	0/0:10,0:9:16.41:0,16,332	0/0:28,0:22:63.22:0,63,1561	0/0:14,0:12:14.92:0,15,217	./.
chr10	45440892	.	A	AGTTGGTGG	8263.35	PASS	AB=0.711;AC=13;AF=0.232;AN=56;BaseQRankSum=-5.240;DP=1005;FS=1.301;HRun=0;HaplotypeScore=223.2540;InbreedingCoeff=-0.0745;MQ=49.45;MQ0=20;MQRankSum=-6.003;QD=16.36;ReadPosRankSum=-2.702;VQSLOD=3.8737;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:52:96.33:0,96,2303	0/0:8,0:8:21.06:0,21,439	0/0:42,0:11:30.02:0,30,392	0/0:46,0:14:30.70:0,31,410	0/1:27,4:30:26.88:804,0,27	0/0:20,0:20:39.13:0,39,923	0/0:35,0:34:72.18:0,72,1389	0/0:32,0:31:45.10:0,45,855	0/0:26,0:26:54.18:0,54,1335	0/1:21,27:51:25.16:1503,0,25	0/1:18,10:30:6.82:573,0,7	0/0:26,0:26:57.16:0,57,1255	0/0:19,0:19:39.10:0,39,801	0/0:24,0:24:51.14:0,51,1175	0/1:16,23:40:44.02:714,0,44	0/1:26,20:50:99:1019,0,155	0/0:42,0:41:87.18:0,87,1936	0/1:33,0:34:40.01:524,0,40	0/1:20,3:23:86.24:305,0,86	0/1:19,15:34:99:289,0,127	1/1:44,50:84:19.92:533,20,0	0/0:29,0:29:66:0,66,1522	0/0:17,0:17:30.09:0,30,691	0/0:45,0:44:87:0,87,1731	0/1:18,13:29:99:209,0,136	0/0:34,0:33:54.22:0,54,1573	0/1:15,31:47:20.43:1213,0,20	0/1:2,13:15:29.55:579,0,30
chr10	45441477	.	G	GA	2514.90	PASS	AB=0.873;AC=23;AF=0.411;AN=56;BaseQRankSum=-7.366;DP=589;FS=0.000;HRun=13;HaplotypeScore=87.2704;InbreedingCoeff=0.6441;MQ=70.68;MQ0=2;MQRankSum=-0.758;QD=8.76;ReadPosRankSum=-0.662;VQSLOD=2.7643;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:15,14:30:61.27:520,61,0	0/1:8,2:10:37.91:38,0,63	0/1:18,0:10:4.81:5,0,49	0/1:22,1:19:41.98:42,0,74	0/0:5,0:22:16.38:0,16,97	1/1:1,1:24:39.94:215,40,0	1/1:5,1:18:17.67:100,18,0	0/0:36,0:36:41.63:0,42,426	1/1:3,12:16:15.13:259,15,0	0/0:7,0:25:37.54:0,38,120	0/0:3,0:11:17.21:0,17,61	1/1:4,11:18:7.68:179,8,0	1/1:1,24:25:36.04:334,36,0	0/1:7,8:15:43.13:136,0,43	0/0:20,3:23:13.71:0,14,239	0/0:4,0:21:30.50:0,30,88	0/0:23,0:23:53.42:0,53,369	0/0:4,0:19:31.45:0,31,103	0/0:3,0:19:31.57:0,32,95	0/0:2,0:13:18.31:0,18,54	0/0:4,0:22:34.61:0,35,101	1/1:1,8:9:17.97:158,18,0	1/1:2,12:15:20.86:182,21,0	1/1:5,26:32:45.33:551,45,0	0/0:6,0:19:25.36:0,25,85	0/1:30,3:34:2.74:3,0,380	0/0:6,0:39:50.87:0,51,149	0/0:1,0:10:12.22:0,12,36
chr10	45441707	.	CATTTT	C	1552.04	PASS	AB=0.791;AC=4;AF=0.071;AN=56;BaseQRankSum=-1.722;DP=483;FS=2.359;HRun=0;HaplotypeScore=127.3239;InbreedingCoeff=0.4357;MQ=68.38;MQ0=1;MQRankSum=4.067;QD=21.56;ReadPosRankSum=-3.173;VQSLOD=2.8471;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:24:21.94:0,22,361	0/0:7,0:7:9.03:0,9,257	0/0:14,0:11:12.01:0,12,227	0/1:22,0:17:3.74:4,0,178	0/0:25,0:25:27.09:0,27,515	0/0:8,0:19:21.07:0,21,408	0/0:9,0:10:15.03:0,15,274	1/1:9,16:25:48.14:769,48,0	0/0:9,0:17:15.04:0,15,230	0/0:18,0:18:27.09:0,27,532	0/0:14,0:14:21.07:0,21,445	0/0:11,0:11:18.05:0,18,301	0/0:9,0:11:9.02:0,9,151	0/0:13,0:14:18.06:0,18,340	0/0:11,0:11:9.02:0,9,154	0/0:16,0:16:17.84:0,18,254	0/0:41,0:41:96.27:0,96,2524	0/0:12,0:11:9.50:0,10,196	0/0:26,0:26:36.11:0,36,651	0/0:17,0:17:39.10:0,39,648	0/0:9,0:9:9.03:0,9,195	0/0:8,0:8:3.01:0,3,83	0/0:11,0:16:12.03:0,12,203	0/0:6,0:6:3.01:0,3,57	0/0:25,0:25:42.14:0,42,854	0/1:7,18:25:2.54:887,0,3	0/0:25,0:25:48.15:0,48,887	0/0:15,0:15:30.03:0,30,543
chr10	45441735	.	T	TTTATTTTATG	10628.42	PASS	AB=1.000;AC=34;AF=0.607;AN=56;BaseQRankSum=-1.520;DP=474;FS=12.083;HRun=0;HaplotypeScore=129.0649;InbreedingCoeff=0.1957;MQ=67.02;MQ0=1;MQRankSum=-5.437;QD=29.86;ReadPosRankSum=0.756;VQSLOD=3.6582;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:20,0:20:99:504,0,251	0/0:4,0:4:12.03:0,12,277	0/0:14,0:10:0.73:0,1,200	0/0:24,0:19:18.61:0,19,301	1/1:1,16:26:47.26:1101,47,0	0/1:18,0:18:99:495,0,183	0/1:8,0:8:84.92:269,0,85	0/0:31,0:31:73.46:0,73,908	0/1:11,0:11:80.77:81,0,191	1/1:0,12:14:38.95:1251,39,0	1/1:1,10:17:32.68:964,33,0	0/1:10,0:10:99:124,0,146	0/1:3,0:3:38.97:102,0,39	0/1:11,0:11:77.88:78,0,203	1/1:0,11:16:6.02:318,6,0	1/1:2,11:19:12.04:574,12,0	0/0:38,0:38:99:0,111,2920	1/1:2,16:20:9.50:479,10,0	1/1:2,0:26:75.02:813,75,0	1/1:2,0:16:40.10:417,40,0	1/1:2,0:13:9.03:120,9,0	0/0:7,0:7:20.99:0,21,188	0/1:13,0:13:99:185,0,168	0/1:5,0:5:73.62:74,0,85	1/1:1,18:28:39.13:1911,39,0	0/1:31,0:31:4.78:5,0,1388	1/1:4,0:21:41.83:527,42,0	1/1:3,0:9:18.06:239,18,0
chr10	45442320	.	TA	T	669.05	PASS	AB=0.749;AC=4;AF=0.071;AN=56;BaseQRankSum=5.661;DP=367;FS=0.000;HRun=11;HaplotypeScore=40.1716;InbreedingCoeff=0.3961;MQ=67.02;MQ0=1;MQRankSum=-1.426;QD=10.97;ReadPosRankSum=-0.117;VQSLOD=2.0317;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,1:24:29.38:0,29,478	0/0:6,0:6:12.03:0,12,128	0/1:10,1:8:25.93:26,0,41	0/0:14,0:8:18.03:0,18,176	0/0:13,0:13:39.10:0,39,413	0/0:17,1:18:26.48:0,26,487	0/0:7,0:6:18.03:0,18,183	1/1:12,20:29:59.88:486,60,0	0/0:8,0:8:21.05:0,21,224	0/0:15,1:16:20.40:0,20,398	0/0:10,0:10:21.01:0,21,212	0/0:3,0:3:9.01:0,9,90	0/0:6,0:6:17.07:0,17,166	0/0:10,0:10:24.03:0,24,242	0/0:12,0:12:32.95:0,33,334	0/0:7,0:7:14.45:0,14,159	0/0:31,2:33:31.87:0,32,724	0/0:28,0:28:63.13:0,63,699	0/0:17,0:18:47.95:0,48,494	0/0:8,0:8:24.02:0,24,243	0/0:7,0:7:21.04:0,21,216	0/0:4,0:4:9.01:0,9,89	0/0:7,0:6:12.03:0,12,128	0/0:5,0:5:15.04:0,15,160	0/0:13,0:13:33.08:0,33,352	0/1:5,13:17:28.28:272,0,28	0/0:12,0:12:24.53:0,25,256	0/0:17,0:16:45.11:0,45,480
chr10	45442791	.	C	CT	9239.78	PASS	AB=0.929;AC=29;AF=0.518;AN=56;BaseQRankSum=-13.411;DP=576;FS=10.773;HRun=8;HaplotypeScore=51.4452;InbreedingCoeff=0.9530;MQ=71.86;MQ0=0;MQRankSum=-0.778;QD=26.70;ReadPosRankSum=-1.927;VQSLOD=4.2817;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:56.97:0,57,511	0/0:11,0:11:33.02:0,33,302	0/0:15,0:15:20.01:0,20,191	0/0:14,0:12:29.75:0,30,264	1/1:3,21:24:60.07:661,60,0	0/0:24,0:23:68.97:0,69,616	0/0:6,0:6:15.01:0,15,137	1/1:6,26:32:78.16:847,78,0	0/0:16,0:16:45.01:0,45,407	1/1:0,24:24:72.18:802,72,0	1/1:0,26:26:74.95:798,75,0	0/1:12,1:13:1.62:2,0,236	0/0:26,0:26:75.03:0,75,683	0/0:19,0:19:51.03:0,51,467	1/1:2,20:22:45.13:519,45,0	1/1:1,14:15:39.12:450,39,0	0/0:31,0:31:82.02:0,82,749	1/1:1,20:21:54.16:623,54,0	1/1:6,21:27:63.16:714,63,0	1/1:4,26:30:78.12:864,78,0	1/1:5,17:21:39.12:450,39,0	0/0:16,1:17:16.43:0,16,405	0/0:14,0:14:36:0,36,325	0/0:13,0:13:39.02:0,39,357	1/1:3,17:20:45.09:505,45,0	1/1:3,25:28:75.17:841,75,0	1/1:4,22:26:54.13:611,54,0	1/1:0,16:16:48.14:554,48,0
chr10	45442989	.	AACGTCTATTCACCCACATAGGGC	A	27568.97	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=17.867;DP=633;FS=13.663;HRun=0;HaplotypeScore=406.6294;InbreedingCoeff=0.9822;MQ=85.57;MQ0=0;MQRankSum=-16.621;QD=128.23;ReadPosRankSum=5.792;VQSLOD=3.2353;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,151,14869	0/0:12,0:12:33.11:0,33,3060	0/0:32,0:32:90.31:0,90,6264	0/0:36,0:36:99:0,102,5899	1/1:7,12:19:30.10:1865,30,0	0/0:18,0:18:51.17:0,51,4368	0/0:22,0:22:63.22:0,63,5977	0/0:26,0:26:69.24:0,69,5246	0/0:30,0:30:87.30:0,87,8874	1/1:5,16:21:51.18:3023,51,0	1/1:4,12:16:36.12:2156,36,0	0/0:22,0:22:63.22:0,63,6438	0/0:18,0:18:51.17:0,51,4807	0/0:26,0:26:75.26:0,75,7253	1/1:4,24:28:69.24:4390,69,0	1/1:4,16:20:42.14:2673,42,0	0/0:28,0:28:81.28:0,81,8153	1/1:2,3:5:9.03:573,9,0	1/1:4,8:12:24.06:1197,24,0	1/1:5,21:26:60.21:3703,60,0	1/1:7,8:15:9.03:543,9,0	0/0:20,0:20:60.21:0,60,6004	0/0:14,0:14:42.14:0,42,4219	0/0:34,0:34:99:0,99,9442	1/1:3,14:17:36.12:2291,36,0	0/0:28,0:28:81.27:0,81,7281	1/1:2,22:24:63.22:4009,63,0	1/1:4,8:12:18.06:1146,18,0
chr10	45443747	.	CGTTGTTGTT	C	8173.76	PASS	AB=0.552;AC=27;AF=0.482;AN=56;BaseQRankSum=13.744;DP=571;FS=0.864;HRun=0;HaplotypeScore=187.6935;InbreedingCoeff=0.8652;MQ=56.11;MQ0=5;MQRankSum=-11.242;QD=32.83;ReadPosRankSum=2.650;VQSLOD=4.3357;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,123,4999	0/0:4,0:11:18.06:0,18,669	0/0:28,0:18:24.08:0,24,744	0/0:18,0:15:21.07:0,21,619	1/1:7,15:22:36.12:974,36,0	0/0:11,0:22:27.04:0,27,920	0/0:17,0:18:39.13:0,39,1213	1/1:21,0:21:6.18:55,6,0	0/0:19,0:19:48.16:0,48,2175	1/1:7,14:21:42.13:1082,42,0	1/1:5,11:16:27.09:740,27,0	0/0:16,0:16:42.14:0,42,1587	0/0:13,0:13:36.08:0,36,1478	0/0:21,0:21:48.16:0,48,1991	1/1:7,12:19:27.09:745,27,0	0/1:3,13:16:99:720,0,107	0/0:29,0:29:75.26:0,75,3082	1/1:7,8:15:5.10:226,5,0	1/1:9,0:17:21.07:407,21,0	1/1:7,0:21:33.96:640,34,0	1/1:10,0:9:6.02:76,6,0	0/0:21,0:21:51.17:0,51,2189	0/0:29,0:29:45.14:0,45,1691	0/0:25,0:25:66.23:0,66,2955	1/1:2,13:15:21.07:583,21,0	1/1:8,0:26:44.74:787,45,0	1/1:9,0:26:50.37:1013,50,0	1/1:0,0:4:6.02:126,6,0
chr10	45443770	.	TTGTTGTTG	T	5585.62	PASS	AB=0.975;AC=16;AF=0.286;AN=56;BaseQRankSum=15.923;DP=580;FS=4.627;HRun=0;HaplotypeScore=175.2063;InbreedingCoeff=-0.0768;MQ=49.39;MQ0=9;MQRankSum=-11.964;QD=21.57;ReadPosRankSum=8.079;VQSLOD=3.5536;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,150,5710	0/0:11,0:11:27.09:0,27,883	0/0:29,0:15:45.12:0,45,1145	0/0:19,0:13:33.09:0,33,867	0/1:23,1:24:99:472,0,231	0/0:20,0:20:39.08:0,39,1177	0/0:18,0:18:51.17:0,51,1650	0/1:14,4:17:99:164,0,362	0/0:21,0:21:63.20:0,63,2303	0/1:21,0:21:99:514,0,173	0/1:19,0:19:99:349,0,312	0/0:21,0:21:63.21:0,63,2268	0/0:14,0:14:42.14:0,42,1615	0/0:21,0:21:63.20:0,63,2363	0/1:26,0:26:99:348,0,381	0/1:15,0:15:99:383,0,140	0/0:30,0:30:90.29:0,90,3471	0/1:16,0:16:87.87:88,0,249	0/1:19,0:18:99:421,0,215	0/1:23,0:23:99:580,0,202	0/1:10,0:10:99:135,0,134	0/0:25,0:25:75.25:0,75,2526	0/0:18,0:18:54.17:0,54,1995	0/0:24,0:24:72.25:0,72,3099	1/1:13,0:13:21.07:324,21,0	0/1:27,0:27:99:844,0,127	0/1:23,0:23:50.73:855,0,51	1/1:4,0:4:6.02:109,6,0
chr10	45452229	.	T	TA	1728.24	PASS	AC=20;AF=0.769;AN=26;BaseQRankSum=-3.693;DP=112;FS=30.664;HRun=7;HaplotypeScore=24.4162;InbreedingCoeff=0.7843;MQ=51.80;MQ0=14;MQRankSum=-0.520;QD=23.35;ReadPosRankSum=0.654;VQSLOD=1.4741;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,16:20:28.54:520,29,0	./.	0/0:4,0:3:8.93:0,9,75	0/0:4,0:4:8.95:0,9,85	./.	1/1:1,7:8:21.06:254,21,0	1/1:3,3:4:9.03:109,9,0	./.	1/1:0,11:11:24.07:290,24,0	./.	./.	1/1:1,2:3:6.02:72,6,0	1/1:2,5:7:9.03:109,9,0	1/1:2,3:5:12.04:144,12,0	./.	./.	0/0:22,0:20:48.07:0,48,462	./.	./.	./.	./.	1/1:2,0:2:6:59,6,0	1/1:1,6:6:15.05:181,15,0	1/1:1,3:4:9.03:109,9,0	./.	./.	./.	./.
chr10	45452898	.	GCTCGCTCT	G	3978.04	PASS	AB=0.827;AC=23;AF=0.411;AN=56;BaseQRankSum=0.556;DP=629;FS=10.966;HRun=0;HaplotypeScore=153.8087;InbreedingCoeff=0.6928;MQ=66.43;MQ0=18;MQRankSum=-3.077;QD=14.31;ReadPosRankSum=0.289;VQSLOD=1.5817;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:51.43:0,51,722	0/1:8,0:8:7.92:88,0,8	0/0:31,0:19:43.54:0,44,393	0/0:43,0:17:29.93:0,30,240	0/1:1,8:11:0.09:0,0,0	0/0:13,0:13:6.02:0,6,102	0/0:32,0:32:11.40:0,11,161	1/1:42,0:39:49.10:870,49,0	0/0:23,0:23:41.35:0,41,1184	1/1:3,17:20:44.68:614,45,0	0/0:2,7:7:0:0,0,0	0/0:26,0:25:59.24:0,59,947	0/0:19,0:19:42.24:0,42,939	0/0:27,0:27:65.57:0,66,1667	1/1:4,27:32:7.82:230,8,0	1/1:0,24:26:17.62:389,18,0	0/0:31,0:31:66.07:0,66,796	1/1:11,0:11:2.56:267,3,0	1/1:5,0:22:44.43:369,44,0	1/1:1,0:16:6.31:85,6,0	1/1:32,0:33:38.98:345,39,0	0/0:13,0:12:24.08:0,24,859	0/0:10,0:10:23.77:0,24,465	0/0:28,0:28:62.97:0,63,1548	0/0:3,13:16:2.80:0,3,14	0/1:21,0:21:99:146,0,236	1/1:0,0:28:23.41:511,23,0	1/1:2,0:3:3.01:64,3,0
chr10	45452900	.	TCG	T	3227.04	PASS	AB=0.965;AC=29;AF=0.518;AN=56;BaseQRankSum=4.038;DP=638;FS=11.383;HRun=0;HaplotypeScore=110.7226;InbreedingCoeff=0.3890;MQ=65.53;MQ0=19;MQRankSum=-1.269;QD=7.81;ReadPosRankSum=0.794;VQSLOD=2.8454;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:33:41.94:42,0,132	1/1:9,0:9:1.23:129,1,0	0/0:30,0:18:43.67:0,44,394	0/0:43,0:17:30.64:0,31,249	0/0:11,0:11:0:0,0,0	1/1:1,13:14:1:84,1,0	1/1:2,31:32:12.04:179,12,0	1/1:43,0:40:78.17:908,78,0	0/1:22,1:23:56.85:57,0,380	1/1:19,0:19:44.66:360,45,0	0/0:9,0:7:0:0,0,0	0/0:26,0:25:49.37:0,49,558	0/0:19,0:19:29.18:0,29,390	0/0:29,0:29:33.48:0,33,718	0/1:32,0:32:10.53:57,0,11	0/1:27,0:27:3.45:107,0,3	0/1:33,0:33:67.53:68,0,211	1/1:11,0:11:21.44:204,21,0	1/1:22,0:20:39.32:287,39,0	1/1:16,0:16:6.29:43,6,0	1/1:32,0:31:38.96:328,39,0	0/0:14,0:13:26.21:0,26,277	0/1:9,1:10:1.64:2,0,200	0/0:28,0:28:52.88:0,53,735	0/0:16,0:16:2.98:0,3,24	0/1:20,3:22:6.78:354,0,7	1/1:28,0:28:23.64:177,24,0	1/1:5,0:3:2.98:22,3,0
chr10	45452902	.	GCT	G	850.72	PASS	AB=0.941;AC=24;AF=0.462;AN=52;BaseQRankSum=6.450;DP=654;FS=4.044;HRun=0;HaplotypeScore=122.1994;InbreedingCoeff=-0.1487;MQ=63.44;MQ0=21;MQRankSum=-1.334;QD=2.05;ReadPosRankSum=5.342;VQSLOD=1.6572;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:15,18:34:1.99:217,2,0	0/0:10,0:10:3.01:0,3,40	./.	./.	0/0:11,0:11:0:0,0,0	0/1:16,0:16:21:32,0,21	0/1:33,0:32:10.10:60,0,10	0/0:40,0:37:5.99:0,6,64	0/1:21,2:23:99:105,0,193	0/1:20,0:20:14.33:28,0,14	0/0:9,0:7:0:0,0,0	0/1:24,2:25:8.60:9,0,244	0/1:19,1:20:11.58:12,0,206	0/0:32,1:35:10.01:0,10,475	0/1:33,0:33:26.55:27,0,54	0/1:28,0:28:38.47:38,0,49	0/1:19,12:31:8.57:171,0,9	0/1:12,0:11:12.30:34,0,12	1/1:22,0:20:2.73:14,3,0	1/1:16,0:16:2.71:14,3,0	1/1:32,0:31:0.47:1,0,0	0/0:13,0:13:24.06:0,24,304	0/1:7,2:10:49.85:50,0,119	0/0:29,2:31:12.48:0,12,523	0/0:17,0:17:0.87:0,1,2	0/1:27,0:25:52.92:53,0,104	1/1:28,0:28:22.42:111,22,0	1/1:5,0:3:2.84:14,3,0
chr10	45453388	.	G	GCTTCTGAGGAATT	2580.13	PASS	AB=0.750;AC=23;AF=0.958;AN=24;BaseQRankSum=-1.568;DP=48;FS=3.153;HRun=0;HaplotypeScore=25.8021;InbreedingCoeff=-0.1764;MQ=147.23;MQ0=0;MQRankSum=-0.683;QD=66.16;ReadPosRankSum=-0.442;VQSLOD=2.8761;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	1/1:4,1:6:18.06:988,18,0	0/1:6,0:9:44.41:680,0,44	./.	./.	./.	1/1:3,0:3:9.03:164,9,0	./.	./.	./.	./.	./.	./.	1/1:2,0:2:3:25,3,0	1/1:1,0:1:3.01:57,3,0	1/1:3,0:3:3.01:50,3,0	./.	./.	./.	1/1:4,0:4:3.01:96,3,0	1/1:3,0:3:9.03:157,9,0	1/1:1,0:1:3.01:75,3,0	1/1:2,0:2:3:25,3,0	1/1:3,0:3:6.02:151,6,0	1/1:2,0:2:6.02:193,6,0	./.	./.
chr10	45454365	.	AAAAAGGAAGTGG	A	14149.50	PASS	AB=1.000;AC=37;AF=0.685;AN=54;BaseQRankSum=9.827;DP=436;FS=0.427;HRun=0;HaplotypeScore=182.2317;InbreedingCoeff=-0.0358;MQ=68.35;MQ0=1;MQRankSum=-9.642;QD=39.30;ReadPosRankSum=4.872;VQSLOD=4.4488;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:37,0:37:99:1173,0,395	0/1:7,0:7:45.11:303,0,45	0/0:29,0:23:38.88:0,39,1614	0/0:16,0:13:0.02:0,0,1171	1/1:0,19:19:26.94:561,27,0	0/1:14,0:14:99:306,0,166	0/1:16,0:16:99:475,0,175	0/1:27,0:27:42.40:628,0,42	0/1:11,0:11:96.55:298,0,97	1/1:2,12:14:39.03:883,39,0	1/1:0,18:18:32.98:738,33,0	1/1:5,0:5:12.03:260,12,0	0/1:9,0:9:45.15:262,0,45	1/1:11,0:11:17.99:389,18,0	1/1:3,14:17:30.09:902,30,0	1/1:0,17:17:42.12:1332,42,0	0/0:31,0:30:90.30:0,90,4540	1/1:1,11:12:16.31:637,16,0	1/1:2,10:12:3.78:661,4,0	1/1:0,11:11:27.01:836,27,0	1/1:0,10:10:6.01:132,6,0	0/1:16,0:16:99:488,0,157	0/1:9,0:9:62.22:190,0,62	0/1:15,0:15:99:168,0,161	1/1:2,14:16:33.11:1165,33,0	0/1:22,0:22:45.89:613,0,46	1/1:2,13:15:21.06:747,21,0	./.
chr10	45454366	.	AAAAGGAAGTGG	A	14872.21	PASS	AC=48;AF=0.889;AN=54;BaseQRankSum=5.798;DP=433;FS=16.383;HRun=0;HaplotypeScore=173.1837;InbreedingCoeff=0.8527;MQ=70.39;MQ0=1;MQRankSum=-10.464;QD=41.89;ReadPosRankSum=2.573;VQSLOD=3.7891;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:13,24:37:57.20:1821,57,0	1/1:1,6:7:15.05:490,15,0	0/0:29,0:23:45.97:0,46,1418	0/0:15,0:13:24.09:0,24,1136	1/1:19,0:19:15.05:411,15,0	1/1:8,6:14:15.05:490,15,0	1/1:8,8:16:24.08:784,24,0	1/1:26,0:26:45.14:885,45,0	1/1:4,7:11:15.05:490,15,0	1/1:12,1:13:30.04:650,30,0	1/1:18,0:18:21.03:509,21,0	1/1:2,3:5:12.04:392,12,0	1/1:4,5:9:12:392,12,0	1/1:4,7:11:18.06:588,18,0	1/1:15,2:17:27.09:769,27,0	1/1:17,0:17:36.12:968,36,0	0/0:33,0:32:84.29:0,84,4237	1/1:12,0:12:16.21:481,16,0	1/1:12,0:12:18.04:427,18,0	1/1:11,0:11:24.08:636,24,0	1/1:10,0:9:3.01:81,3,0	1/1:8,8:16:24.08:748,24,0	1/1:3,6:9:9.03:274,9,0	1/1:10,5:15:9.03:294,9,0	1/1:15,0:15:33.11:886,33,0	1/1:21,0:21:39.13:841,39,0	1/1:14,0:14:21.07:565,21,0	./.
chr10	45454367	.	AAAGGAAGTGG	A	13504.37	PASS	AB=0.998;AC=37;AF=0.685;AN=54;BaseQRankSum=9.205;DP=427;FS=4.499;HRun=0;HaplotypeScore=166.7759;InbreedingCoeff=0.0626;MQ=70.66;MQ0=1;MQRankSum=-9.338;QD=38.58;ReadPosRankSum=5.678;VQSLOD=4.3708;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:36,0:37:99:1301,0,267	0/1:7,0:7:25.04:346,0,25	0/0:29,0:23:49.59:0,50,1490	0/0:16,0:13:16.31:0,16,1154	1/1:19,0:19:6.83:365,7,0	0/1:13,0:13:99:339,0,112	0/1:16,0:16:99:553,0,105	1/1:3,23:26:66.18:1484,66,0	0/1:11,0:11:65.23:340,0,65	1/1:13,0:13:18.05:596,18,0	1/1:18,0:18:8.78:457,9,0	1/1:5,0:5:12.04:294,12,0	0/1:8,0:8:28.09:273,0,28	1/1:11,0:11:18.06:440,18,0	1/1:16,0:16:23.23:665,23,0	1/1:17,0:17:28.38:886,28,0	0/0:32,0:31:96.27:0,96,4158	1/1:11,0:11:16.34:446,16,0	0/1:12,0:12:6.44:361,0,6	1/1:11,0:11:13.44:553,13,0	0/1:10,0:9:1.01:70,0,1	0/1:16,0:16:99:584,0,103	0/1:9,0:9:52.77:223,0,53	0/1:15,0:15:98.60:196,0,99	1/1:14,0:14:33.11:827,33,0	1/1:1,20:21:57.10:1381,57,0	1/1:14,0:14:21.07:523,21,0	./.
chr10	45454722	.	A	AT	2593.44	PASS	AB=0.716;AC=23;AF=0.411;AN=56;BaseQRankSum=-4.863;DP=259;FS=5.052;HRun=10;HaplotypeScore=37.4370;InbreedingCoeff=0.7663;MQ=51.01;MQ0=0;MQRankSum=-3.049;QD=21.98;ReadPosRankSum=-0.875;VQSLOD=3.9937;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:38.85:0,39,311	0/0:6,0:6:17.98:0,18,147	0/0:16,0:9:13.04:0,13,105	0/0:15,0:4:2.97:0,3,25	1/1:1,8:9:9.02:96,9,0	0/0:9,0:9:26.73:0,27,204	0/0:10,0:10:26.93:0,27,218	1/1:1,9:6:17.78:171,18,0	0/0:4,0:4:11.99:0,12,98	1/1:0,6:6:15.04:159,15,0	1/1:0,8:8:24.02:243,24,0	0/0:4,0:4:8.97:0,9,72	0/0:5,0:5:14.98:0,15,123	0/0:11,0:11:32.94:0,33,267	0/1:1,8:9:0.52:200,0,1	0/0:2,0:2:2.94:0,3,18	0/0:22,0:22:56.89:0,57,462	1/1:2,9:11:27.07:287,27,0	1/1:2,10:12:35.10:347,35,0	1/1:2,8:10:24.06:253,24,0	1/1:0,8:8:18.05:192,18,0	0/0:7,0:7:17.98:0,18,147	0/0:8,0:8:23.97:0,24,196	0/0:7,0:7:2.95:0,3,25	1/1:1,4:5:12.03:128,12,0	1/1:1,15:16:42.11:446,42,0	0/1:5,8:12:6.81:273,0,7	0/1:1,0:1:0:0,0,0
chr10	45458603	.	T	TA	3150.71	PASS	AB=0.683;AC=36;AF=0.643;AN=56;BaseQRankSum=-3.666;DP=538;FS=11.870;HRun=15;HaplotypeScore=84.0067;InbreedingCoeff=-0.0315;MQ=73.48;MQ0=2;MQRankSum=1.506;QD=6.99;ReadPosRankSum=-0.201;VQSLOD=1.3842;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,19:26:21.38:279,21,0	1/1:7,9:17:15.29:223,15,0	0/0:27,0:21:1.29:0,1,43	0/0:13,0:11:0.44:0,0,41	0/1:11,12:25:5.92:145,0,6	0/1:10,6:16:24.04:39,0,24	0/1:6,6:16:24.97:94,0,25	0/0:9,0:24:27.43:0,27,93	1/1:4,11:15:2.96:133,3,0	1/1:10,19:31:38.35:438,38,0	0/1:8,9:18:39.15:102,0,39	0/1:11,10:23:9.37:125,0,9	1/1:5,6:11:11.89:91,12,0	0/1:7,9:16:4.25:65,0,4	1/1:5,13:18:8.82:183,9,0	1/1:4,7:11:2.96:133,3,0	0/1:20,2:24:22.32:22,0,163	1/1:4,13:19:17.82:140,18,0	1/1:10,3:20:32.25:224,32,0	1/1:9,13:22:38.79:306,39,0	0/1:7,3:10:32.91:33,0,38	0/1:11,12:23:12.91:108,0,13	0/1:8,13:21:16.03:16,0,29	1/1:2,6:8:11.99:101,12,0	0/1:10,13:24:3.31:169,0,3	0/0:8,0:22:24.75:0,25,71	0/1:13,13:27:14.31:95,0,14	1/1:2,7:9:5.99:50,6,0
chr10	45462093	.	A	AC	399.63	PASS	AC=16;AF=0.889;AN=18;BaseQRankSum=-1.470;DP=151;FS=11.139;HRun=1;HaplotypeScore=17.8709;MQ=32.35;MQ0=51;MQRankSum=-1.737;QD=7.40;ReadPosRankSum=1.203;VQSLOD=-0.5170;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:6,0:1:2.60:0,3,10	./.	./.	./.	1/1:0,10:6:6.02:90,6,0	./.	./.	1/1:1,5:2:5.75:57,6,0	./.	./.	./.	1/1:1,9:4:3.01:45,3,0	./.	1/1:0,8:4:3.01:45,3,0	1/1:2,3:3:9:106,9,0	./.	1/1:1,3:1:3.01:45,3,0	./.	./.	./.	./.	./.	./.	1/1:0,6:3:3.01:45,3,0	1/1:1,4:1:3.01:45,3,0	./.
chr10	45464254	.	C	CA	3027.19	PASS	AC=48;AF=0.923;AN=52;BaseQRankSum=-2.777;DP=302;FS=0.000;HRun=1;HaplotypeScore=9.8601;InbreedingCoeff=0.2914;MQ=37.41;MQ0=6;MQRankSum=-2.935;QD=10.58;ReadPosRankSum=0.829;VQSLOD=1.1637;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,10:5:9.03:135,9,0	1/1:0,8:3:6.02:90,6,0	0/0:2,0:1:3.01:0,3,39	0/0:4,0:2:5.99:0,6,59	1/1:4,12:6:9.03:135,9,0	1/1:1,17:11:33.11:494,33,0	./.	1/1:1,15:2:2.98:21,3,0	1/1:0,12:5:15.05:224,15,0	1/1:0,12:1:3.01:45,3,0	1/1:1,13:3:9.03:135,9,0	1/1:1,16:8:24.08:359,24,0	1/1:1,9:3:6.02:90,6,0	1/1:1,9:6:9.03:135,9,0	1/1:1,16:4:12.04:179,12,0	1/1:0,11:4:6.02:90,6,0	1/1:0,11:7:15.05:224,15,0	1/1:0,6:2:5.98:65,6,0	1/1:1,5:2:5.98:65,6,0	1/1:0,14:4:6.02:90,6,0	./.	1/1:0,7:2:3.01:45,3,0	1/1:3,7:3:3.01:45,3,0	1/1:1,10:5:11.96:131,12,0	1/1:1,18:6:9.03:135,9,0	1/1:2,14:7:11.97:114,12,0	1/1:0,7:1:3.01:45,3,0	1/1:1,7:1:3.01:45,3,0
chr10	45464480	.	T	TA	6298.62	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-1.129;DP=472;FS=2.460;HRun=2;HaplotypeScore=75.3795;InbreedingCoeff=0.9052;MQ=59.78;MQ0=8;MQRankSum=-0.233;QD=15.95;ReadPosRankSum=2.258;VQSLOD=5.0897;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:17:44.36:320,44,0	1/1:5,0:4:8.77:52,9,0	0/0:29,0:11:17.49:0,17,141	0/0:24,0:13:24.06:0,24,193	1/1:18,0:16:26.29:160,26,0	1/1:18,0:18:33.69:247,34,0	1/1:9,0:9:23.94:205,24,0	1/1:17,7:24:60.24:478,60,0	1/1:7,0:8:20.17:134,20,0	1/1:14,0:9:20.28:154,20,0	1/1:9,0:8:17.86:132,18,0	1/1:15,0:14:37.62:256,38,0	1/1:10,0:9:23.96:205,24,0	1/1:11,0:11:26.53:207,27,0	1/1:17,0:17:40.87:291,41,0	1/1:22,0:22:37.67:243,38,0	0/0:23,0:22:38.79:0,39,319	1/1:16,0:16:47.62:380,48,0	1/1:17,0:16:47.48:378,47,0	1/1:22,0:22:61.58:402,62,0	1/1:19,0:19:47.15:314,47,0	1/1:13,0:12:15.77:162,16,0	1/1:1,7:7:2.80:13,3,0	1/1:16,0:16:32.12:212,32,0	1/1:19,0:18:29.39:203,29,0	1/1:21,0:18:47.74:395,48,0	1/1:27,0:25:69.97:472,70,0	1/1:18,0:17:46.65:283,47,0
chr10	45464598	.	AAAC	A	1682.94	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-0.333;DP=615;FS=1.290;HRun=0;HaplotypeScore=97.1240;InbreedingCoeff=0.9935;MQ=77.13;MQ0=0;MQRankSum=-3.106;QD=31.17;ReadPosRankSum=1.531;VQSLOD=3.6192;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:69.22:0,69,1433	1/1:0,9:5:15.05:234,15,0	0/0:27,0:27:60.19:0,60,1340	0/0:14,0:13:36.12:0,36,682	0/0:28,0:23:69.22:0,69,1083	1/1:3,26:29:63.21:982,63,0	1/1:0,16:16:39.13:608,39,0	0/0:30,0:30:84.27:0,84,1703	0/0:24,0:24:72.25:0,72,1537	0/0:19,0:17:51.15:0,51,730	0/0:13,0:7:24.08:0,24,397	0/0:26,0:26:72.20:0,72,1408	0/0:19,0:19:54.19:0,54,1132	0/0:14,0:14:39.12:0,39,777	0/0:33,0:33:93.30:0,93,1480	0/0:30,0:30:84.29:0,84,1390	0/0:19,0:19:54.16:0,54,1120	0/0:22,0:21:66.23:0,66,1062	0/0:17,0:17:48.13:0,48,711	0/0:24,0:18:45.09:0,45,684	0/0:25,0:25:66.21:0,66,1024	0/0:16,0:15:45.12:0,45,870	0/0:19,0:15:45.13:0,45,908	0/0:23,0:23:69.24:0,69,1445	0/0:26,0:15:39.11:0,39,615	0/0:19,0:17:51.17:0,51,1007	0/0:24,0:23:60.20:0,60,1003	0/0:24,0:20:60.20:0,60,981
chr10	45465621	.	T	TGAGCTTCAC	613.07	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.191;DP=701;FS=0.000;HRun=0;HaplotypeScore=192.3303;InbreedingCoeff=0.9924;MQ=83.16;MQ0=0;MQRankSum=-3.741;QD=76.63;ReadPosRankSum=-0.669;VQSLOD=3.4125;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,141,4515	1/1:4,4:8:21.07:705,21,0	0/0:19,0:19:57.17:0,57,1607	0/0:23,0:23:63.15:0,63,1624	0/0:15,0:15:41.91:0,42,1247	0/0:23,0:23:69.24:0,69,2163	0/0:26,0:26:75.26:0,75,2362	0/0:31,0:31:78.26:0,78,2121	0/0:27,0:27:75.23:0,75,2248	0/0:23,0:23:66.23:0,66,2087	0/0:9,0:9:27.09:0,27,793	0/0:31,0:31:93.31:0,93,2855	0/0:23,0:23:63.22:0,63,2025	0/0:35,0:35:99:0,102,3172	0/0:41,0:41:99:0,117,3631	0/0:36,0:36:99:0,108,3314	0/0:41,0:41:99:0,120,3742	0/0:17,0:17:48.16:0,48,1399	0/0:17,0:17:48.16:0,48,1397	0/0:18,0:18:54.19:0,54,1723	0/0:37,0:37:99:0,111,3375	0/0:21,0:21:60.21:0,60,1855	0/0:10,0:10:30.10:0,30,952	0/0:30,0:30:87.26:0,87,2545	0/0:19,0:19:54.19:0,54,1689	0/0:28,0:28:81.26:0,81,2402	0/0:35,0:34:99:0,105,3287	0/0:8,0:8:24.06:0,24,708
chr10	45466597	.	GAAGAAAGAAAGA	G	1275.13	PASS	AB=1.000;AC=24;AF=0.545;AN=44;BaseQRankSum=1.417;DP=550;FS=4.866;HRun=0;HaplotypeScore=177.2389;InbreedingCoeff=0.2923;MQ=63.09;MQ0=9;MQRankSum=0.682;QD=4.19;ReadPosRankSum=0.099;VQSLOD=2.3367;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:14:2.63:18,3,0	1/1:11,0:11:9.02:107,9,0	./.	./.	1/1:14,8:21:14.76:110,15,0	1/1:15,0:15:6.02:86,6,0	./.	./.	1/1:17,0:16:15.03:235,15,0	0/1:30,0:26:66.89:103,0,67	1/1:23,0:21:12:123,12,0	0/1:15,0:15:77.28:115,0,77	0/0:12,0:12:8.96:0,9,69	0/0:18,0:18:4.71:0,5,29	0/0:23,0:23:3.38:0,3,8	./.	0/1:32,0:30:8.42:8,0,40	0/0:24,0:23:21.03:0,21,358	0/0:19,0:18:4.28:0,4,57	0/0:31,0:31:2.75:0,3,47	0/1:13,0:12:26.33:114,0,26	0/0:16,0:16:11.53:0,12,184	./.	0/1:24,0:22:28.31:28,0,44	1/1:23,0:23:15.02:176,15,0	1/1:19,0:19:9.01:91,9,0	0/1:24,0:24:0.37:0,0,1	1/1:21,0:19:6.02:113,6,0
chr10	45471131	.	GC	G	18498.22	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=6.441;DP=648;FS=2.871;HRun=4;HaplotypeScore=74.2677;InbreedingCoeff=0.9977;MQ=70.84;MQ0=0;MQRankSum=-2.919;QD=32.11;ReadPosRankSum=1.389;VQSLOD=5.5127;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,45:45:99:1440,120,0	1/1:0,9:9:27.08:324,27,0	0/0:10,0:10:27.07:0,27,346	0/0:16,0:16:36.59:0,37,470	1/1:1,28:29:75.23:899,75,0	1/1:1,20:21:60.18:720,60,0	1/1:1,28:29:78.24:936,78,0	1/1:0,22:22:60.18:720,60,0	1/1:1,15:16:42.13:503,42,0	1/1:1,21:22:57.17:683,57,0	1/1:4,13:17:24.07:284,24,0	1/1:0,37:37:99:1224,102,0	1/1:0,25:25:72.22:863,72,0	1/1:2,30:32:87.27:1044,87,0	1/1:0,21:21:63.19:756,63,0	1/1:0,19:19:54.17:648,54,0	0/0:46,0:46:99:0,138,1912	1/1:0,36:36:99:1260,105,0	1/1:2,16:18:51.16:611,51,0	1/1:1,20:21:51.16:611,51,0	1/1:9,30:39:87.24:1030,87,0	1/1:0,18:18:54.17:648,54,0	1/1:0,15:15:35.60:431,36,0	1/1:0,25:25:75.23:900,75,0	1/1:2,13:15:36.11:432,36,0	1/1:1,19:20:57.17:682,57,0	1/1:2,15:17:48.11:560,48,0	1/1:0,8:8:24.07:288,24,0
chr10	45471203	.	CT	C	4312.90	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=8.055;DP=723;FS=16.720;HRun=4;HaplotypeScore=93.0289;InbreedingCoeff=0.9999;MQ=84.84;MQ0=0;MQRankSum=-3.969;QD=31.48;ReadPosRankSum=1.176;VQSLOD=3.2903;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:61,0:61:99:0,171,2314	1/1:0,13:13:33.10:393,33,0	0/0:15,0:15:36.11:0,36,469	0/0:30,0:30:71.01:0,71,918	0/0:28,0:28:84.27:0,84,1158	0/0:25,0:25:72.23:0,72,990	0/0:23,0:23:63.20:0,63,867	0/0:20,0:20:57.17:0,57,755	0/0:17,0:17:48.16:0,48,672	0/0:20,0:20:60.19:0,60,811	0/0:26,0:26:69.22:0,69,948	0/0:30,0:30:81.19:0,81,1071	0/0:22,0:22:63.18:0,63,847	0/0:32,0:32:90.27:0,90,1224	0/0:25,0:25:72.23:0,72,993	0/0:31,0:31:90.28:0,90,1227	0/0:33,0:33:96.31:0,96,1325	0/0:33,0:33:84.28:0,84,1176	1/1:1,22:23:66.20:783,66,0	1/1:3,32:35:90.27:1073,90,0	1/1:3,28:31:75.16:881,75,0	0/0:24,0:24:66.20:0,66,893	0/0:25,0:25:66.08:0,66,904	0/0:28,0:28:81.26:0,81,1116	0/0:17,0:17:48.16:0,48,672	0/0:21,0:21:63.20:0,63,853	1/1:0,21:21:60.18:719,60,0	1/1:2,12:14:39.12:463,39,0
chr10	45473839	.	CT	C	3418.16	PASS	AB=0.734;AC=39;AF=0.696;AN=56;BaseQRankSum=4.138;DP=697;FS=7.400;HRun=16;HaplotypeScore=102.2447;InbreedingCoeff=0.2765;MQ=70.69;MQ0=0;MQRankSum=0.703;QD=5.60;ReadPosRankSum=3.634;VQSLOD=2.6274;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,34:48:22.30:298,22,0	0/1:13,1:14:26.13:26,0,119	0/1:22,0:14:4.48:4,0,36	0/0:29,0:21:6.47:0,6,81	1/1:12,18:31:22.34:211,22,0	0/0:11,0:12:20.82:0,21,165	0/0:11,2:13:8.89:0,9,171	1/1:19,18:41:25.16:231,25,0	1/1:5,15:20:20.46:126,20,0	0/1:13,9:23:2.67:112,0,3	0/1:5,5:11:3.11:72,0,3	1/1:16,16:32:51.44:320,51,0	1/1:15,16:33:37.88:207,38,0	0/1:8,8:17:27.09:75,0,27	0/1:19,5:26:34.13:131,0,34	0/1:17,11:30:54.04:86,0,54	0/0:28,0:33:26.87:0,27,371	1/1:8,16:26:10.92:159,11,0	1/1:12,1:20:16.58:56,17,0	1/1:9,0:25:30.96:99,31,0	1/1:11,0:27:20.26:59,20,0	1/1:9,17:27:39:246,39,0	1/1:8,12:21:39.58:223,40,0	1/1:10,23:36:8.73:253,9,0	0/1:13,15:29:17.35:160,0,17	1/1:7,9:19:31.03:167,31,0	1/1:7,0:19:22.61:74,23,0	0/1:2,0:12:4.90:24,0,5
chr10	45475881	.	CCA	C	59.15	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=4.336;DP=635;FS=0.000;HRun=0;HaplotypeScore=77.4098;InbreedingCoeff=0.6296;MQ=95.70;MQ0=1;MQRankSum=-0.824;QD=4.55;ReadPosRankSum=-4.342;VQSLOD=0.4534;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,114,2286	0/0:6,0:6:18.05:0,18,330	0/0:26,0:26:74.82:0,75,1315	0/0:33,0:33:85.45:0,85,1712	0/0:31,0:31:93.32:0,93,1857	0/0:25,0:25:75.26:0,75,1520	0/0:27,0:27:81.26:0,81,1609	1/1:1,4:5:14.96:121,15,0	0/0:15,0:15:45.14:0,45,854	0/0:24,0:24:72.24:0,72,1415	0/0:19,0:19:57.20:0,57,1147	0/0:29,0:29:87.30:0,87,1752	0/0:16,0:16:48.16:0,48,975	0/0:12,0:12:36.12:0,36,731	0/0:34,0:34:99:0,102,2072	0/0:31,0:31:93.32:0,93,1889	0/0:20,0:20:57.20:0,57,1130	0/0:18,0:18:54.18:0,54,1076	0/0:20,0:20:60.19:0,60,1097	0/0:30,0:30:90.26:0,90,1704	0/0:44,0:44:99:0,132,2655	0/0:20,0:20:57.18:0,57,1121	0/0:23,0:23:66.23:0,66,1295	0/0:23,0:23:69.24:0,69,1376	0/0:23,0:22:66.23:0,66,1331	0/1:5,0:7:39.83:40,0,223	0/0:21,0:21:63.17:0,63,1238	0/0:14,0:14:42.14:0,42,852
chr10	45476326	.	A	AT	6746.50	PASS	AC=18;AF=0.346;AN=52;BaseQRankSum=-7.525;DP=673;FS=0.675;HRun=8;HaplotypeScore=70.7161;InbreedingCoeff=0.9962;MQ=78.68;MQ0=0;MQRankSum=-1.878;QD=26.25;ReadPosRankSum=3.737;VQSLOD=5.5141;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:48:99:0,127,1138	0/0:10,0:10:23.99:0,24,216	0/0:18,0:18:41.67:0,42,345	0/0:16,0:15:35.88:0,36,302	1/1:5,17:22:48.14:554,48,0	1/1:2,15:19:41.79:444,42,0	1/1:3,24:27:54.16:623,54,0	./.	0/0:18,0:18:45:0,45,407	1/1:0,27:27:81.17:897,81,0	1/1:0,21:22:60.18:691,60,0	0/0:25,0:25:54.02:0,54,494	0/0:31,0:31:75:0,75,677	0/0:23,0:24:56.04:0,56,494	1/1:5,31:36:75.22:866,75,0	1/1:2,36:38:90.27:1039,90,0	0/0:26,0:26:69.02:0,69,632	1/1:5,32:37:62.80:976,63,0	0/0:19,0:19:42:0,42,379	0/0:33,1:34:52.41:0,52,729	0/0:27,2:29:13.84:0,14,619	0/0:24,0:24:66.02:0,66,599	0/0:21,0:21:62.98:0,63,561	0/0:20,0:20:53.95:0,54,480	1/1:3,26:29:57.17:657,57,0	./.	0/0:32,0:31:84:0,84,759	0/0:20,0:20:54.02:0,54,494
chr10	45476582	.	CTCT	C	7002.21	PASS	AC=18;AF=0.346;AN=52;BaseQRankSum=18.956;DP=704;FS=7.906;HRun=0;HaplotypeScore=157.3985;InbreedingCoeff=0.9999;MQ=79.04;MQ0=0;MQRankSum=-16.046;QD=36.28;ReadPosRankSum=-0.588;VQSLOD=5.3883;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:61,0:61:99:0,181,4079	0/0:11,0:11:33.09:0,33,714	0/0:29,0:28:71.69:0,72,1608	0/0:20,0:18:47.26:0,47,1080	1/1:2,16:18:33.09:414,33,0	1/1:0,15:15:42.14:545,42,0	1/1:2,18:20:60.17:740,60,0	./.	0/0:33,0:33:99:0,99,2331	1/1:2,23:25:72.22:972,72,0	1/1:0,16:16:37.93:462,38,0	0/0:51,0:51:99:0,154,3652	0/0:27,0:27:81.26:0,81,1918	0/0:46,0:46:99:0,138,3338	1/1:3,38:41:99:1620,123,0	1/1:2,26:28:84.27:1108,84,0	0/0:33,0:33:99:0,99,2360	1/1:1,12:13:36.12:503,36,0	0/0:21,0:21:60.19:0,60,1322	0/0:25,0:25:75.24:0,75,1784	0/0:40,0:40:99:0,120,2752	0/0:22,0:22:60.21:0,60,1476	0/0:17,0:17:51.18:0,51,1247	0/0:25,0:25:75.22:0,75,1747	1/1:2,15:17:48.16:638,48,0	./.	0/0:31,0:31:93.25:0,93,2065	0/0:17,0:17:51.18:0,51,1256
chr10	45476587	.	CT	C	4919.33	PASS	AC=20;AF=0.370;AN=54;BaseQRankSum=19.600;DP=700;FS=4.155;HRun=1;HaplotypeScore=146.6046;InbreedingCoeff=0.9731;MQ=79.25;MQ0=0;MQRankSum=-16.060;QD=25.10;ReadPosRankSum=-1.209;VQSLOD=4.3948;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:58:99:0,172,2705	0/0:9,0:9:27.09:0,27,432	0/0:28,0:27:75.16:0,75,1059	0/0:21,1:20:55.05:0,55,752	1/1:0,16:16:29.97:252,30,0	1/1:1,15:16:44.97:392,45,0	1/1:2,18:20:59.87:511,60,0	./.	0/0:33,0:33:99:0,99,1582	1/1:1,24:25:75.04:712,75,0	1/1:1,17:18:44.73:371,45,0	0/0:52,0:52:99:0,157,2493	0/0:28,0:28:84.29:0,84,1342	0/0:47,0:47:99:0,141,2226	1/1:1,41:42:99:1107,126,0	1/1:0,27:27:80.97:702,81,0	0/0:37,0:37:99:0,108,1671	1/1:1,13:14:39.05:381,39,0	0/0:17,0:17:51.17:0,51,816	0/0:25,0:25:75.26:0,75,1194	0/0:39,0:39:99:0,117,1822	0/0:21,0:21:63.20:0,63,985	0/0:18,0:18:54.18:0,54,849	0/0:25,0:25:75.26:0,75,1199	1/1:0,17:17:51:466,51,0	1/1:1,0:1:3:27,3,0	0/0:28,0:27:81.28:0,81,1295	0/0:17,0:17:51.17:0,51,815
chr10	45476619	.	GA	G	8853.63	PASS	AB=0.913;AC=19;AF=0.339;AN=56;BaseQRankSum=17.780;DP=871;FS=3.194;HRun=2;HaplotypeScore=150.0657;InbreedingCoeff=0.9210;MQ=85.56;MQ0=0;MQRankSum=-10.476;QD=31.96;ReadPosRankSum=-0.469;VQSLOD=4.2238;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:57:99:0,172,2501	0/0:7,0:7:21.07:0,21,314	0/0:36,0:36:99:0,105,1479	0/0:32,0:31:83.93:0,84,1151	1/1:0,26:26:69.01:829,69,0	1/1:3,22:25:63.20:815,63,0	1/1:2,20:22:54.18:699,54,0	0/0:20,0:20:60.16:0,60,809	0/0:36,0:36:99:0,108,1559	1/1:1,30:31:93.29:1190,93,0	1/1:0,25:25:69.22:882,69,0	0/0:61,0:61:99:0,178,2553	0/0:32,0:32:96.31:0,96,1417	0/0:45,0:45:99:0,129,1898	1/1:3,47:50:99:1706,132,0	1/1:2,35:37:99:1281,99,0	0/0:39,0:39:99:0,117,1726	1/1:0,14:14:39.13:503,39,0	0/0:19,0:19:54.17:0,54,791	0/0:40,0:40:99:0,111,1640	0/0:44,0:44:99:0,123,1781	0/0:36,0:36:99:0,105,1522	0/0:23,0:23:69.21:0,69,993	0/0:22,0:22:66.22:0,66,989	1/1:0,26:26:72.19:932,72,0	0/1:19,2:21:17.66:18,0,725	0/0:28,0:27:81.26:0,81,1193	0/0:17,0:17:51.16:0,51,741
chr10	45477061	.	C	CG	12339.83	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=20.636;DP=887;FS=0.000;HRun=0;HaplotypeScore=101.4434;InbreedingCoeff=1.0000;MQ=82.60;MQ0=0;MQRankSum=-1.948;QD=39.42;ReadPosRankSum=2.156;VQSLOD=4.9700;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:93.31:0,93,1301	0/0:15,0:15:45.15:0,45,627	0/0:31,0:31:87.27:0,87,1197	0/0:21,0:22:50.66:0,51,678	1/1:1,28:29:72.19:1087,72,0	1/1:1,29:30:78.26:1147,78,0	1/1:1,29:30:81.22:1188,81,0	0/0:46,0:46:99:0,138,1930	0/0:30,0:30:87.29:0,87,1217	1/1:2,35:37:99:1468,105,0	1/1:0,26:28:78.26:1171,78,0	0/0:45,0:45:99:0,132,1828	0/0:29,0:29:81.24:0,81,1090	0/0:35,0:35:99:0,105,1468	1/1:2,54:56:99:2160,144,0	1/1:4,47:51:99:1887,129,0	0/0:24,0:24:72.19:0,72,967	1/1:0,29:29:84.28:1241,84,0	0/0:22,0:22:66.20:0,66,904	0/0:29,0:29:84.27:0,84,1153	0/0:43,0:43:99:0,120,1660	0/0:32,0:32:93.31:0,93,1298	0/0:32,0:32:96.32:0,96,1343	0/0:22,0:22:63.21:0,63,880	1/1:0,23:23:66.22:991,66,0	0/0:25,1:26:38.09:0,38,1009	0/0:45,0:45:99:0,132,1844	0/0:15,0:15:45.08:0,45,571
chr10	45478057	.	CAAAAA	C	9314.28	PASS	AB=0.611;AC=39;AF=0.696;AN=56;BaseQRankSum=7.441;DP=536;FS=5.913;HRun=16;HaplotypeScore=129.3174;InbreedingCoeff=0.8688;MQ=51.00;MQ0=8;MQRankSum=-9.402;QD=23.70;ReadPosRankSum=4.451;VQSLOD=2.9898;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:8,0:22:12.22:104,0,12	1/1:1,11:13:24.03:347,24,0	0/0:20,0:9:11.91:0,12,236	0/0:16,0:11:11.95:0,12,194	1/1:9,21:30:56.83:833,57,0	1/1:0,15:16:39.06:598,39,0	1/1:3,9:12:20.95:294,21,0	1/1:7,17:24:47.77:734,48,0	1/1:1,0:17:35.62:319,36,0	1/1:6,24:29:56.77:1099,57,0	1/1:1,17:18:41.99:611,42,0	1/1:7,0:13:20.59:175,21,0	1/1:3,0:17:35.34:303,35,0	1/1:2,0:13:18:176,18,0	1/1:3,13:16:27.04:411,27,0	1/1:7,14:22:23.89:336,24,0	0/0:19,1:24:34.26:0,34,1221	1/1:4,10:14:1.12:233,1,0	0/0:5,0:14:39.13:0,39,663	0/0:8,0:19:47.82:0,48,777	0/0:11,0:14:22.27:0,22,313	1/1:4,0:26:56.49:515,56,0	1/1:2,0:18:35.15:333,35,0	1/1:7,0:16:17.12:124,17,0	1/1:1,19:20:45.10:679,45,0	1/1:10,24:33:72.09:1090,72,0	0/0:7,0:21:35.45:0,35,626	0/0:4,0:11:33.11:0,33,573
chr10	45480309	.	TAC	T	1247.19	PASS	AB=0.983;AC=19;AF=0.339;AN=56;BaseQRankSum=3.719;DP=800;FS=14.506;HRun=0;HaplotypeScore=136.0677;InbreedingCoeff=0.1212;MQ=59.95;MQ0=24;MQRankSum=3.135;QD=3.27;ReadPosRankSum=3.754;VQSLOD=1.3378;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:41,0:42:28.79:29,0,41	1/1:8,0:8:14.63:110,15,0	0/0:54,0:27:17.89:0,18,228	0/0:58,1:27:7.12:0,7,236	1/1:6,0:6:3.01:34,3,0	1/1:11,3:13:0.45:61,0,0	0/1:49,3:50:79.06:79,0,119	0/0:19,0:18:0.71:0,1,352	0/0:29,0:29:15.15:0,15,118	0/1:18,0:17:73.11:73,0,89	0/0:3,0:3:5.94:0,6,42	0/0:31,0:31:9:0,9,79	0/1:28,0:29:5.05:5,0,81	0/0:48,0:48:20.91:0,21,180	0/0:26,2:25:5.78:0,6,34	0/1:22,1:21:22.49:22,0,39	0/0:47,0:47:99:0,102,1494	0/1:34,2:33:24.22:24,0,52	0/1:22,0:20:85.71:89,0,86	1/1:21,0:20:20.53:130,21,0	0/1:78,0:75:99:460,0,141	0/0:17,0:17:27.09:0,27,375	0/0:12,0:12:15.50:0,15,213	0/0:33,0:35:1.12:0,1,45	0/0:16,1:14:5.30:0,5,25	0/0:17,0:19:41.74:0,42,451	0/1:20,0:19:5.87:183,0,6	1/1:9,0:9:19.73:115,20,0
chr10	45480324	.	A	ACGCACG	3012.72	PASS	AB=0.937;AC=23;AF=0.411;AN=56;BaseQRankSum=2.357;DP=825;FS=7.160;HRun=0;HaplotypeScore=173.1456;InbreedingCoeff=0.3826;MQ=53.50;MQ0=29;MQRankSum=-3.514;QD=7.06;ReadPosRankSum=2.832;VQSLOD=1.7981;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:45:5.38:0,5,170	0/0:12,0:12:15.99:0,16,285	0/0:40,0:16:39.05:0,39,576	0/0:46,0:16:31.25:0,31,500	1/1:0,0:4:3.01:47,3,0	1/1:5,4:13:9.03:174,9,0	0/1:10,30:46:4.31:509,0,4	0/0:22,0:20:36.62:0,37,704	0/1:31,0:31:43.31:167,0,43	1/1:3,0:22:31.83:428,32,0	1/1:0,0:7:5.50:26,5,0	0/1:31,0:31:33.61:107,0,34	0/1:33,0:33:86.96:114,0,87	0/1:52,0:52:99:160,0,129	1/1:4,22:32:4.72:210,5,0	1/1:2,18:26:11.93:352,12,0	0/0:40,0:40:99:0,109,2475	1/1:5,31:37:24.04:621,24,0	0/0:25,0:22:33.11:0,33,685	0/0:21,0:20:3.90:0,4,279	0/0:85,0:79:66.35:0,66,2161	0/0:15,0:15:30.49:0,30,385	0/0:14,0:14:24.51:0,25,303	0/1:40,0:40:34.85:69,0,35	1/1:3,10:15:6.02:209,6,0	0/1:23,0:23:7.38:7,0,488	0/0:22,0:21:36.28:0,36,864	0/0:8,0:8:21.07:0,21,419
chr10	45480328	.	A	ACACACACG	5738.15	PASS	AB=0.996;AC=36;AF=0.643;AN=56;BaseQRankSum=-6.981;DP=834;FS=1.413;HRun=0;HaplotypeScore=185.4148;InbreedingCoeff=0.1842;MQ=54.06;MQ0=27;MQRankSum=-4.368;QD=7.84;ReadPosRankSum=-4.305;VQSLOD=2.8991;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:10,35:50:10.62:148,11,0	0/0:12,0:12:17.63:0,18,238	0/0:35,0:14:6.73:0,7,194	0/1:39,0:11:25.11:25,0,81	0/0:4,0:4:0.89:0,1,2	0/1:9,0:8:34.14:66,0,34	0/1:46,0:44:99:239,0,104	1/1:24,0:22:32.57:361,33,0	1/1:6,24:40:18.68:671,19,0	0/1:22,0:22:16.96:228,0,17	0/1:9,0:9:3.83:32,0,4	1/1:2,30:42:8.42:383,8,0	1/1:4,26:38:20.06:480,20,0	1/1:2,40:52:17.50:583,17,0	1/1:31,0:28:9.01:135,9,0	0/1:26,0:24:8.69:173,0,9	0/0:43,0:43:75.18:0,75,1766	1/1:34,0:31:1.67:284,2,0	0/1:27,0:24:99:111,0,229	0/1:20,0:19:5.36:5,0,160	0/1:85,0:79:99:263,0,929	1/1:16,0:16:32.25:293,32,0	1/1:14,0:14:29.27:240,29,0	1/1:7,34:46:11.51:285,12,0	1/1:15,0:12:9.01:143,9,0	1/1:11,0:22:48.59:586,49,0	0/1:23,0:22:3.19:3,0,408	0/0:8,0:8:21.06:0,21,260
chr10	45480330	.	ACG	A	4125.46	PASS	AB=0.976;AC=19;AF=0.339;AN=56;BaseQRankSum=0.987;DP=806;FS=17.294;HRun=0;HaplotypeScore=133.8904;InbreedingCoeff=0.4118;MQ=54.79;MQ0=27;MQRankSum=2.677;QD=11.75;ReadPosRankSum=2.898;VQSLOD=2.5065;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:47,2:48:51.72:99,0,52	1/1:1,11:12:18.49:249,18,0	0/0:25,0:12:29.66:0,30,242	0/0:38,0:12:12.75:0,13,157	0/1:5,0:5:11.51:12,0,14	0/1:9,0:8:9.01:9,0,35	0/0:47,0:45:15.37:0,15,400	0/1:22,2:22:56.40:56,0,331	0/0:39,1:40:5.93:0,6,176	0/0:25,0:24:23.97:0,24,484	0/0:9,0:9:11.94:0,12,103	0/0:38,0:38:14.81:0,15,126	0/1:33,1:34:37.91:38,0,117	0/0:44,0:44:24:0,24,200	0/0:31,0:28:11.98:0,12,109	0/0:26,0:24:8.07:0,8,135	0/0:41,1:42:99:0,120,1716	0/0:34,0:31:12.55:0,13,184	1/1:18,8:24:37.58:534,38,0	1/1:3,17:19:21.07:298,21,0	1/1:46,37:77:99:1855,121,0	0/0:17,0:17:33.39:0,33,215	0/1:14,0:14:18.21:18,0,135	0/1:42,1:43:42.15:44,0,42	0/0:17,0:14:14.06:0,14,101	0/0:22,0:22:46.05:0,46,390	1/1:9,13:22:34.96:633,35,0	1/1:0,7:8:21.05:280,21,0
chr10	45482541	.	AC	A	7005.58	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=10.071;DP=757;FS=2.111;HRun=4;HaplotypeScore=78.0386;InbreedingCoeff=0.9999;MQ=88.31;MQ0=0;MQRankSum=-6.547;QD=32.28;ReadPosRankSum=2.215;VQSLOD=5.5800;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,105,1470	0/0:12,0:12:33.11:0,33,462	0/0:23,0:23:57.13:0,57,746	0/0:31,0:31:80.01:0,80,1116	1/1:0,19:19:51.16:612,51,0	1/1:2,19:21:54.17:648,54,0	1/1:1,23:24:66.20:792,66,0	0/0:30,0:30:84.27:0,84,1159	0/0:28,0:28:84.26:0,84,1139	1/1:1,18:19:54.14:634,54,0	1/1:1,13:14:36.11:432,36,0	0/0:37,0:37:99:0,102,1412	0/0:24,0:24:67.47:0,67,927	0/0:33,0:33:96.28:0,96,1315	1/1:2,32:34:90.27:1080,90,0	1/1:1,34:35:96.29:1152,96,0	0/0:42,0:42:99:0,123,1719	1/1:1,16:17:48.15:576,48,0	0/0:25,0:25:69.21:0,69,933	0/0:11,0:11:33.11:0,33,458	0/0:68,0:68:99:0,196,2682	0/0:19,0:19:57.18:0,57,775	0/0:17,0:17:45.14:0,45,613	0/0:36,0:36:99:0,105,1469	1/1:0,34:34:90.28:1080,90,0	0/0:26,0:26:78.23:0,78,1040	0/0:18,0:18:54.18:0,54,755	0/0:21,0:21:48.16:0,48,671
chr10	45483468	.	GTAGC	G	10522.54	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=15.916;DP=767;FS=0.634;HRun=0;HaplotypeScore=134.1948;InbreedingCoeff=0.9986;MQ=82.85;MQ0=0;MQRankSum=-5.469;QD=47.19;ReadPosRankSum=4.654;VQSLOD=5.5967;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,159,3929	0/0:7,0:7:18.06:0,18,486	0/0:29,0:29:81.28:0,81,2025	0/0:24,0:23:63.18:0,63,1509	1/1:2,19:21:45.15:839,45,0	1/1:1,12:13:30.10:565,30,0	1/1:0,30:30:75.26:1424,75,0	0/0:24,0:24:63.22:0,63,1589	0/0:21,0:21:60.21:0,60,1603	1/1:2,21:24:66.23:1227,66,0	1/1:1,10:11:30.06:565,30,0	0/0:37,0:37:99:0,108,2898	0/0:37,0:37:99:0,108,2816	0/0:29,0:29:81.28:0,81,2186	1/1:2,29:31:78.27:1476,78,0	1/1:0,47:47:99:2328,123,0	0/0:37,0:37:99:0,111,2937	1/1:0,16:16:42.14:797,42,0	0/0:24,0:24:66.23:0,66,1690	0/0:25,0:25:75.26:0,75,1984	0/0:45,0:45:99:0,126,3379	0/0:24,0:24:69.24:0,69,1807	0/0:21,0:21:63.22:0,63,1688	0/0:23,0:23:66.21:0,66,1710	1/1:3,27:30:69.24:1300,69,0	0/0:42,0:42:99:0,120,3116	0/0:25,0:25:75.24:0,75,1967	0/0:16,0:16:48.16:0,48,1247
chr10	45485183	.	TACACAC	T	2689.03	PASS	AC=26;AF=0.481;AN=54;BaseQRankSum=5.678;DP=664;FS=0.000;HRun=0;HaplotypeScore=178.7662;InbreedingCoeff=0.8079;MQ=60.59;MQ0=9;MQRankSum=-7.024;QD=10.34;ReadPosRankSum=1.183;VQSLOD=2.7280;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:48:29.19:0,29,395	1/1:4,5:9:5.78:122,6,0	./.	0/0:34,0:27:6.02:0,6,85	0/0:23,0:23:11.02:0,11,191	0/0:25,0:24:12.04:0,12,306	0/0:35,0:34:24.01:0,24,558	0/0:16,0:16:3.01:0,3,70	1/1:5,8:12:8.90:183,9,0	0/0:21,0:22:31.66:0,32,768	0/0:12,0:12:3.01:0,3,53	1/1:11,2:17:20.10:314,20,0	1/1:16,3:21:21.07:371,21,0	1/1:10,6:16:3.01:61,3,0	0/0:36,0:35:18.02:0,18,443	0/0:26,0:25:11.92:0,12,181	0/0:27,0:28:54.18:0,54,1489	0/0:16,0:16:33.11:0,33,909	1/1:14,0:14:6.02:84,6,0	1/1:16,0:16:21.07:293,21,0	1/1:28,0:26:6.02:84,6,0	1/1:17,10:28:12.04:221,12,0	1/1:8,7:15:18.05:343,18,0	1/1:33,15:50:13.78:191,14,0	0/0:27,0:27:9.03:0,9,188	0/0:16,0:25:36.56:0,37,492	1/1:26,0:26:38.76:542,39,0	1/1:6,0:6:6.02:84,6,0
chr10	45485198	.	A	ACT	350.48	PASS	AB=0.872;AC=7;AF=0.125;AN=56;BaseQRankSum=0.686;DP=744;FS=7.348;HRun=0;HaplotypeScore=164.6865;InbreedingCoeff=-0.1584;MQ=48.81;MQ0=16;MQRankSum=0.709;QD=2.03;ReadPosRankSum=0.342;VQSLOD=2.2292;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:68,0:67:99:0,115,962	0/0:11,0:11:17.76:0,18,139	0/0:30,0:15:32.72:0,33,327	0/0:26,0:15:44.53:0,45,399	0/1:14,1:22:19.89:20,0,76	0/1:28,0:27:65.09:65,0,72	0/0:34,0:32:2.54:0,3,223	0/0:12,0:12:35.93:0,36,309	0/0:23,0:22:47.83:0,48,376	0/1:15,12:27:99:205,0,243	0/1:10,8:18:22.63:23,0,41	0/0:26,0:26:65.68:0,66,515	0/0:26,0:26:50.56:0,51,379	0/0:26,0:26:35.90:0,36,288	0/1:36,0:35:46.73:47,0,116	0/1:26,0:25:59.93:60,0,144	0/0:33,0:32:80.92:0,81,892	0/1:15,0:15:61.23:61,0,126	0/0:20,0:19:31.74:0,32,257	0/0:20,0:18:29.95:0,30,268	0/0:34,0:30:17.93:0,18,150	0/0:32,0:32:53.75:0,54,420	0/0:20,0:20:47.71:0,48,364	0/0:45,0:44:64.40:0,64,498	0/0:25,0:25:6.94:0,7,222	0/0:26,0:26:74.88:0,75,637	0/0:22,0:22:44.78:0,45,425	0/0:12,0:11:8.97:0,9,78
chr10	45485212	.	ACACACACACAC	A	3157.38	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=7.019;DP=774;FS=12.782;HRun=0;HaplotypeScore=235.2833;InbreedingCoeff=0.9310;MQ=50.76;MQ0=25;MQRankSum=-5.388;QD=26.76;ReadPosRankSum=2.929;VQSLOD=1.7477;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:66,0:65:99:0,114,3582	0/0:9,0:9:11.09:0,11,220	0/0:22,0:7:18.53:0,19,261	0/0:29,0:20:57.62:0,58,987	0/0:24,0:23:23.11:0,23,648	0/0:31,0:30:35.32:0,35,961	0/0:36,0:34:59.95:0,60,1894	0/0:12,0:12:33.11:0,33,768	0/0:25,0:24:51.17:0,51,1011	0/0:27,0:27:53.44:0,53,2472	0/0:19,0:19:11.97:0,12,286	0/0:30,0:30:66.96:0,67,1212	0/0:27,0:27:46.57:0,47,880	0/0:28,0:28:42.14:0,42,721	0/0:40,0:39:50.73:0,51,1434	0/0:32,0:31:51.11:0,51,1158	0/0:35,0:34:80.59:0,81,3648	0/0:17,0:17:40.26:0,40,1965	1/1:2,18:19:42.12:687,42,0	1/1:5,15:17:24.04:760,24,0	1/1:6,29:29:6.02:223,6,0	0/0:29,0:29:48.16:0,48,818	0/0:18,0:18:42.14:0,42,804	0/0:43,0:42:65.53:0,66,1253	0/0:25,0:25:42.14:0,42,1051	0/0:32,0:32:90.30:0,90,2644	1/1:4,27:28:38.39:1428,38,0	1/1:1,10:10:6.02:223,6,0
chr10	45486345	.	AAC	A	4526.43	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=12.478;DP=709;FS=0.000;HRun=0;HaplotypeScore=82.2322;InbreedingCoeff=0.9997;MQ=88.78;MQ0=2;MQRankSum=-3.623;QD=38.04;ReadPosRankSum=1.322;VQSLOD=6.7266;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:93.30:0,93,1673	0/0:9,0:9:27.09:0,27,495	0/0:26,0:26:72.23:0,72,1256	0/0:26,0:26:63.22:0,63,1143	0/0:26,0:26:78.27:0,78,1429	0/0:15,0:15:42.14:0,42,767	0/0:19,0:19:57.16:0,57,974	0/0:34,0:34:96.28:0,96,1612	0/0:29,0:29:84.29:0,84,1530	0/0:29,0:29:84.28:0,84,1491	0/0:20,0:20:60.21:0,60,1097	0/0:28,0:28:81.26:0,81,1451	0/0:17,0:17:48.16:0,48,880	0/0:27,0:27:81.28:0,81,1477	0/0:43,0:43:99:0,126,2270	0/0:38,0:38:99:0,105,1894	0/0:32,0:32:96.27:0,96,1665	0/0:27,0:27:75.26:0,75,1363	1/1:0,18:18:54.15:723,54,0	1/1:1,20:20:54.15:752,54,0	1/1:3,35:37:93.31:1332,93,0	0/0:15,0:15:42.13:0,42,730	0/0:20,0:20:54.13:0,54,921	0/0:32,0:32:84.27:0,84,1508	0/0:19,0:19:54.17:0,54,940	0/0:27,0:27:72.24:0,72,1270	1/1:1,24:25:69.23:989,69,0	1/1:0,17:17:51.17:731,51,0
chr10	45495114	.	AC	A	4551.74	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=12.192;DP=665;FS=2.807;HRun=1;HaplotypeScore=60.4436;InbreedingCoeff=0.9995;MQ=85.14;MQ0=1;MQRankSum=-6.337;QD=39.93;ReadPosRankSum=0.315;VQSLOD=5.3807;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,129,2061	0/0:8,0:8:24.08:0,24,383	0/0:23,0:23:69.23:0,69,1084	0/0:18,0:19:48.62:0,49,846	0/0:26,0:26:78.25:0,78,1223	0/0:21,0:21:63.21:0,63,1007	0/0:21,0:21:63.21:0,63,1004	0/0:49,0:49:99:0,147,2329	0/0:22,0:22:66.22:0,66,1047	0/0:24,0:24:72.25:0,72,1150	0/0:19,0:19:57.19:0,57,907	0/0:26,0:26:78.27:0,78,1243	0/0:31,0:31:93.30:0,93,1451	0/0:13,0:13:39.12:0,39,599	0/0:21,0:21:63.21:0,63,1004	0/0:30,0:30:90.28:0,90,1407	0/0:15,0:15:45.15:0,45,714	0/0:19,0:18:51.17:0,51,814	1/1:0,18:18:54.16:736,54,0	1/1:0,20:20:60.20:838,60,0	1/1:0,27:27:75.25:1049,75,0	0/0:18,0:18:54.18:0,54,862	0/0:27,0:27:81.26:0,81,1268	0/0:20,0:20:60.20:0,60,959	0/0:27,0:27:81.25:0,81,1270	0/0:29,0:29:87.28:0,87,1347	1/1:0,28:28:75.25:1048,75,0	1/1:0,21:21:63.21:881,63,0
chr10	45495440	.	AC	A	12641.64	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=8.138;DP=689;FS=4.102;HRun=8;HaplotypeScore=75.7533;InbreedingCoeff=0.9960;MQ=79.43;MQ0=0;MQRankSum=-3.077;QD=22.86;ReadPosRankSum=6.675;VQSLOD=4.9309;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,25:29:69.11:666,69,0	0/0:8,0:8:18.03:0,18,194	0/0:23,0:23:26.72:0,27,439	0/0:18,0:17:18.96:0,19,283	1/1:6,9:15:30.02:283,30,0	1/1:4,13:17:42.07:405,42,0	1/1:7,26:33:62.77:608,63,0	0/0:25,0:25:63.17:0,63,739	1/1:3,23:26:69.10:665,69,0	1/1:4,17:21:48.03:450,48,0	1/1:1,10:11:24.04:232,24,0	1/1:5,28:33:78.12:751,78,0	1/1:2,25:27:41.73:556,42,0	1/1:2,27:29:81.13:782,81,0	1/1:10,21:31:72.10:692,72,0	1/1:4,33:37:93.14:898,93,0	0/0:35,0:35:87.24:0,87,1036	1/1:1,19:20:51.08:492,51,0	1/1:7,26:33:78.11:752,78,0	1/1:2,16:18:29.28:442,29,0	1/1:4,40:44:99:1130,117,0	1/1:4,18:22:45.07:434,45,0	1/1:6,12:18:30.02:290,30,0	1/1:0,25:25:72.12:695,72,0	1/1:3,16:19:45.07:434,45,0	0/0:27,0:27:75.21:0,75,884	1/1:4,22:26:57.09:550,57,0	1/1:1,18:19:45.07:434,45,0
chr10	45496561	.	AAAAT	A	2735.08	PASS	AC=16;AF=0.296;AN=54;BaseQRankSum=7.955;DP=516;FS=3.158;HRun=0;HaplotypeScore=95.8080;InbreedingCoeff=0.9382;MQ=50.31;MQ0=18;MQRankSum=-10.158;QD=21.88;ReadPosRankSum=-0.199;VQSLOD=3.3559;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:13,9:19:23.97:297,24,0	0/0:13,0:13:24.08:0,24,604	0/0:11,0:1:3.01:0,3,63	./.	0/0:32,0:32:69.24:0,69,1672	0/0:21,0:21:45.15:0,45,1045	0/0:12,0:12:27.09:0,27,653	0/0:31,0:26:63.22:0,63,1546	1/1:6,12:17:33.11:567,33,0	0/0:27,0:27:69.23:0,69,1623	0/0:16,0:16:36.08:0,36,839	1/1:5,12:17:33.10:543,33,0	1/1:11,10:21:39.12:635,39,0	1/1:3,9:12:21.07:362,21,0	0/0:26,0:26:57.20:0,57,1398	0/0:16,0:16:31.34:0,31,708	0/0:21,0:21:39.13:0,39,947	0/0:20,0:20:45.15:0,45,1109	0/0:25,0:22:54.18:0,54,1256	0/0:13,0:13:36.12:0,36,911	0/0:9,0:9:18.06:0,18,455	1/1:5,3:8:6.02:104,6,0	1/1:6,8:14:18.02:279,18,0	1/1:6,7:11:9.03:147,9,0	0/0:11,0:11:30.06:0,30,687	0/0:28,0:26:66.23:0,66,1634	0/0:37,0:37:93.30:0,93,2245	0/0:20,0:19:48.64:0,49,1207
chr10	45496581	.	TA	T	2620.60	PASS	AB=1.000;AC=31;AF=0.554;AN=56;BaseQRankSum=11.745;DP=529;FS=4.742;HRun=13;HaplotypeScore=76.8969;InbreedingCoeff=0.9191;MQ=53.86;MQ0=13;MQRankSum=-3.056;QD=8.32;ReadPosRankSum=0.217;VQSLOD=2.8640;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,20:24:33.31:262,33,0	0/0:3,0:9:14.20:0,14,72	0/1:9,0:3:0.68:1,0,23	0/0:2,0:1:2.97:0,3,20	0/0:25,2:28:32.03:0,32,459	0/0:17,0:19:47.75:0,48,437	0/0:10,0:10:26.92:0,27,232	1/1:11,21:29:56.59:412,57,0	1/1:5,11:15:29.78:218,30,0	0/0:25,0:23:48.07:0,48,463	0/0:15,0:17:35.88:0,36,329	1/1:5,12:18:32.75:240,33,0	1/1:5,14:19:32.74:240,33,0	1/1:3,12:15:29.78:219,30,0	0/0:23,1:25:41:0,41,536	0/0:14,1:16:18.39:0,18,289	0/0:22,1:23:31.98:0,32,440	0/0:21,0:21:50.90:0,51,453	1/1:13,0:30:39.91:117,40,0	1/1:3,0:13:21.16:67,21,0	1/1:0,0:10:16.29:47,16,0	1/1:2,4:6:8.94:66,9,0	1/1:5,7:12:14.88:109,15,0	1/1:2,10:10:17.86:131,18,0	0/0:18,0:18:41.86:0,42,372	1/1:7,24:29:64:452,64,0	1/1:5,0:38:54.94:159,55,0	1/1:5,2:22:31.46:104,31,0
chr10	45496803	.	TCTCG	T	2285.64	PASS	AB=0.916;AC=23;AF=0.426;AN=54;BaseQRankSum=7.162;DP=542;FS=4.102;HRun=0;HaplotypeScore=122.8282;InbreedingCoeff=0.7358;MQ=74.71;MQ0=6;MQRankSum=-5.009;QD=10.11;ReadPosRankSum=0.824;VQSLOD=2.9162;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:24,1:25:16.72:224,17,0	0/1:5,2:7:1.34:46,0,1	0/1:33,0:21:4.96:5,0,336	0/0:61,0:35:16.38:0,16,540	0/0:16,0:16:23.95:0,24,529	0/0:19,0:19:36.12:0,36,840	0/0:29,0:29:56.75:0,57,1274	1/1:15,5:20:21.69:427,22,0	0/0:15,0:15:2.04:0,2,6	0/0:13,0:13:30.10:0,30,671	0/0:10,0:10:18.06:0,18,378	1/1:21,2:22:10.23:113,10,0	1/1:14,2:16:14.08:192,14,0	0/0:17,0:17:2.50:0,2,9	0/0:21,0:21:36.12:0,36,808	0/0:11,0:11:33.10:0,33,702	0/0:43,0:42:99:0,111,2499	0/0:33,0:33:86.89:0,87,2006	1/1:6,5:11:18.06:285,18,0	1/1:6,5:11:9.03:150,9,0	1/1:12,1:13:6.02:94,6,0	0/1:13,0:13:0:0,0,0	0/0:8,0:8:0:0,0,0	1/1:16,2:17:8.98:87,9,0	0/0:10,0:10:12.04:0,12,277	1/1:18,2:20:7.07:294,7,0	1/1:5,10:15:36.10:558,36,0	./.
chr10	45496813	.	T	TCG	1045.98	PASS	AB=1.000;AC=22;AF=0.407;AN=54;BaseQRankSum=7.938;DP=514;FS=3.528;HRun=0;HaplotypeScore=114.2246;InbreedingCoeff=0.5718;MQ=77.53;MQ0=8;MQRankSum=-4.213;QD=5.51;ReadPosRankSum=-1.554;VQSLOD=3.0761;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:28:11.42:113,11,0	1/1:8,0:8:3.89:37,4,0	0/0:42,0:23:24.71:0,25,412	0/0:73,0:40:1.03:0,1,526	0/0:12,0:12:24.08:0,24,343	0/0:16,0:16:39.13:0,39,558	0/0:25,0:25:59.92:0,60,810	0/1:18,0:17:4.94:231,0,5	1/1:10,0:10:3.01:36,3,0	0/0:11,0:11:30.10:0,30,414	0/0:9,0:9:21.07:0,21,295	0/1:19,0:18:5.67:46,0,6	1/1:17,0:18:14.01:79,14,0	1/1:13,0:13:2.88:35,3,0	0/0:16,0:16:39.13:0,39,557	0/0:13,0:13:39.12:0,39,539	0/0:43,0:42:99:0,117,1651	0/0:32,0:32:87.29:0,87,1241	0/1:9,0:9:3.49:38,0,3	1/1:7,0:7:2.74:47,3,0	1/1:10,0:10:6.02:94,6,0	0/0:11,0:10:0:0,0,0	./.	1/1:18,0:17:8.80:71,9,0	0/0:5,0:5:12.04:0,12,171	1/1:5,11:16:37.16:369,37,0	0/1:16,0:16:0.31:26,0,0	0/0:3,0:2:3.01:0,3,41
chr10	45496815	.	G	GCGCTCTCTCTCT	1336.86	PASS	AB=1.000;AC=22;AF=0.393;AN=56;BaseQRankSum=4.724;DP=525;FS=0.000;HRun=0;HaplotypeScore=186.4334;InbreedingCoeff=0.4475;MQ=75.25;MQ0=8;MQRankSum=-2.813;QD=4.95;ReadPosRankSum=-4.537;VQSLOD=0.6990;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:31,0:32:18.78:368,19,0	1/1:3,0:9:4.37:110,4,0	0/0:43,0:23:19.04:0,19,585	0/1:75,0:39:2.65:3,0,995	0/0:11,0:11:26.80:0,27,863	0/0:16,0:16:42.13:0,42,1404	0/0:26,0:26:63.19:0,63,2062	0/1:20,0:19:99:199,0,122	1/1:2,7:14:3.48:184,3,0	0/0:11,0:11:30.10:0,30,972	0/0:9,0:9:21.07:0,21,588	0/1:19,0:19:3.45:130,0,3	1/1:18,0:18:19.37:183,19,0	1/1:1,0:11:3.25:134,3,0	0/0:16,0:16:39.13:0,39,1322	0/0:13,0:13:39.12:0,39,1154	0/0:44,0:43:99:0,117,4097	0/0:32,0:32:87:0,87,3112	0/1:9,0:9:1.48:1,0,273	0/1:7,0:7:13.42:13,0,74	1/1:8,0:8:6.02:93,6,0	1/1:1,7:11:0.47:1,0,0	0/0:0,0:10:0:0,0,0	1/1:19,0:18:8.77:70,9,0	0/0:5,0:5:12.04:0,12,458	0/1:16,0:16:18.60:19,0,276	0/0:16,0:16:12.21:0,12,576	0/0:3,0:2:2.60:0,3,10
chr10	45496825	.	GCTCTCT	G	1087.85	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=5.201;DP=550;FS=1.614;HRun=0;HaplotypeScore=143.4929;InbreedingCoeff=0.7627;MQ=71.96;MQ0=9;MQRankSum=-2.396;QD=19.09;ReadPosRankSum=-0.326;VQSLOD=3.4152;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:14.29:0,14,272	0/0:12,0:12:14.37:0,14,172	0/0:45,0:23:20.27:0,20,351	0/0:75,0:41:9.03:0,9,692	0/0:11,0:11:21.07:0,21,564	0/0:15,0:17:45.15:0,45,1150	0/0:26,0:28:60.21:0,60,1740	0/0:25,0:24:53.68:0,54,911	0/0:13,0:13:6.02:0,6,127	0/0:10,0:10:21.06:0,21,582	0/0:8,0:8:18.06:0,18,493	0/0:21,0:20:18.04:0,18,242	0/0:20,0:20:20.89:0,21,252	0/0:11,0:11:11.63:0,12,194	0/0:19,0:19:45.14:0,45,1201	0/0:12,0:13:27.09:0,27,796	0/0:44,0:46:99:0,100,2857	0/0:31,0:36:87.24:0,87,2279	1/1:2,8:10:23.79:355,24,0	1/1:4,4:8:6.02:111,6,0	1/1:8,1:9:3.01:40,3,0	0/1:10,0:9:0:0,0,0	0/0:9,0:9:3.01:0,3,40	0/0:20,0:19:9.01:0,9,113	0/0:4,0:4:9.03:0,9,302	0/0:16,0:16:39.44:0,39,959	1/1:3,12:15:31.92:621,32,0	1/1:4,1:4:6.02:112,6,0
chr10	45498697	.	G	GAA	2554.28	PASS	AB=0.825;AC=47;AF=0.839;AN=56;BaseQRankSum=2.152;DP=404;FS=2.538;HRun=16;HaplotypeScore=73.5381;InbreedingCoeff=0.3069;MQ=47.80;MQ0=23;MQRankSum=-1.618;QD=6.90;ReadPosRankSum=-2.527;VQSLOD=-0.1447;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,11:30:3.39:177,3,0	0/1:6,0:10:2.86:40,0,3	0/1:3,0:1:0:0,0,0	0/0:8,0:3:2.96:0,3,19	1/1:10,0:12:11.90:89,12,0	1/1:6,0:5:6.92:36,7,0	1/1:14,0:10:3:27,3,0	1/1:18,2:15:17.91:178,18,0	1/1:3,8:14:20.93:210,21,0	1/1:12,0:11:14.64:96,15,0	1/1:16,1:16:28.66:197,29,0	0/1:9,9:19:16.36:31,0,16	1/1:12,5:16:5.98:57,6,0	1/1:7,4:12:9.02:102,9,0	1/1:10,1:11:18.32:134,18,0	1/1:12,0:17:13.36:109,13,0	0/0:23,0:24:16.93:0,17,123	1/1:11,1:10:10.98:74,11,0	1/1:12,0:12:13.81:115,14,0	1/1:11,1:18:21.03:217,21,0	1/1:8,3:10:10.84:107,11,0	1/1:11,0:11:14.82:124,15,0	1/1:8,1:16:16.57:127,17,0	1/1:8,5:14:5.38:45,5,0	1/1:10,0:9:11.97:105,12,0	1/1:17,6:25:0.68:163,1,0	0/1:9,2:11:13.01:123,0,13	0/1:7,0:6:0:0,0,0
chr10	45498710	.	A	AAAAAAG	2285.89	PASS	AB=1.000;AC=26;AF=0.464;AN=56;BaseQRankSum=0.726;DP=452;FS=0.505;HRun=0;HaplotypeScore=77.0666;InbreedingCoeff=0.2886;MQ=52.44;MQ0=23;MQRankSum=-2.937;QD=7.40;ReadPosRankSum=-0.329;VQSLOD=1.7003;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:32,0:30:28.47:28,0,239	0/0:11,0:10:6.23:0,6,100	0/0:9,0:3:2.94:0,3,28	0/0:14,0:6:1.56:0,2,51	1/1:6,20:29:38.39:335,38,0	1/1:6,0:9:9.95:122,10,0	1/1:4,0:9:3.01:80,3,0	0/0:21,0:18:10.18:0,10,157	0/1:13,0:13:5.34:5,0,26	1/1:8,0:17:32.58:287,33,0	1/1:10,0:20:41.07:459,41,0	0/0:17,0:17:16.27:0,16,133	0/0:16,0:15:24.34:0,24,193	0/0:10,0:10:11.81:0,12,92	1/1:7,18:26:16.46:303,16,0	1/1:14,0:14:24.28:272,24,0	0/0:24,0:22:32.40:0,32,402	1/1:10,0:15:10.87:230,11,0	0/1:11,0:11:22.26:22,0,98	0/1:18,0:18:24.91:25,0,137	0/0:8,0:8:4.28:0,4,28	0/1:8,0:8:26.41:26,0,53	0/1:18,0:18:21.59:22,0,201	0/0:10,0:10:14.18:0,14,102	1/1:2,13:18:9.50:228,10,0	0/1:22,0:22:12.60:13,0,244	0/1:15,0:13:17.40:17,0,110	0/0:3,0:3:5.98:0,6,47
chr10	45499087	.	GGGAAAAAAA	G	7392.47	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=1.244;DP=507;FS=0.939;HRun=0;HaplotypeScore=155.5505;InbreedingCoeff=0.9466;MQ=63.64;MQ0=8;MQRankSum=-5.922;QD=48.32;ReadPosRankSum=4.743;VQSLOD=4.1750;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:58.34:0,58,1678	0/0:4,0:3:3.48:0,3,38	0/0:39,0:15:38.57:0,39,652	0/0:42,0:22:42.06:0,42,925	1/1:0,14:14:23.97:469,24,0	1/1:0,21:21:48.16:1441,48,0	1/1:0,16:16:27.09:781,27,0	0/0:21,0:21:51.14:0,51,1249	0/0:21,0:21:57.14:0,57,1546	1/1:1,11:12:30.05:664,30,0	1/1:0,12:12:23.99:540,24,0	0/0:18,0:18:39.09:0,39,1174	0/0:13,0:13:20.83:0,21,534	0/0:13,0:13:33.08:0,33,1036	1/1:1,28:29:48.16:1315,48,0	1/1:1,17:18:33.11:1028,33,0	0/0:34,0:34:99:0,102,3968	1/1:1,15:16:6.02:127,6,0	0/0:13,0:13:39.12:0,39,1283	0/0:16,0:15:39.11:0,39,1170	0/0:9,0:9:10.25:0,10,117	0/0:13,0:12:33.11:0,33,927	0/0:17,0:17:36.98:0,37,711	0/0:16,0:16:33.50:0,34,831	1/1:0,15:15:33.11:1027,33,0	0/0:16,0:16:21.14:0,21,1528	0/0:19,0:19:44.97:0,45,1372	0/0:6,0:6:15.04:0,15,511
chr10	45499098	.	A	AAAAAAAG	12001.92	PASS	AB=0.600;AC=31;AF=0.554;AN=56;BaseQRankSum=-12.643;DP=576;FS=1.992;HRun=0;HaplotypeScore=139.5628;InbreedingCoeff=0.8118;MQ=63.35;MQ0=8;MQRankSum=-0.234;QD=41.39;ReadPosRankSum=-1.506;VQSLOD=4.6366;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:9,15:27:63.26:864,0,63	1/1:0,4:4:0.47:1,0,0	0/0:37,0:16:1.03:0,1,201	0/0:37,0:21:20.16:0,20,396	0/0:17,0:17:15.05:0,15,272	0/0:23,0:23:60.18:0,60,1027	0/0:20,0:19:30.10:0,30,548	1/1:9,25:37:84.24:1918,84,0	1/1:6,16:23:27.09:1002,27,0	0/0:12,0:11:21.06:0,21,377	0/0:12,0:12:18.02:0,18,297	1/1:4,14:21:1.74:649,2,0	1/1:1,12:16:9.03:333,9,0	1/1:2,14:18:21.07:780,21,0	0/0:30,0:30:48.14:0,48,876	0/0:22,0:22:48.13:0,48,783	0/0:38,0:38:81.24:0,81,1637	0/0:20,0:20:12.03:0,12,184	1/1:4,11:18:43.33:904,43,0	1/1:3,12:14:30.10:1026,30,0	1/1:4,5:10:7.27:331,7,0	1/1:2,10:11:21.06:614,21,0	1/1:5,10:16:15.92:271,16,0	1/1:3,15:19:18.53:668,19,0	0/0:18,0:18:36.12:0,36,671	1/1:1,12:14:39.12:1206,39,0	1/1:5,17:28:26.93:1000,27,0	1/1:9,1:9:24.07:433,24,0
chr10	45499342	.	TA	T	2579.10	PASS	AB=0.889;AC=19;AF=0.339;AN=56;BaseQRankSum=-1.978;DP=413;FS=4.577;HRun=11;HaplotypeScore=55.8884;InbreedingCoeff=0.9209;MQ=76.41;MQ0=0;MQRankSum=-1.488;QD=15.63;ReadPosRankSum=2.171;VQSLOD=4.4069;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:25:65.78:0,66,359	0/0:0,0:6:14.33:0,14,77	0/0:18,0:18:30.01:0,30,365	0/0:11,0:10:14.93:0,15,121	1/1:3,18:21:18.89:357,19,0	1/1:0,12:12:35.96:295,36,0	1/1:2,10:13:32:252,32,0	0/0:16,0:16:30.06:0,30,307	0/0:3,0:16:34.69:0,35,213	1/1:3,14:17:41.93:345,42,0	1/1:1,7:8:17.95:144,18,0	0/0:4,0:17:43.30:0,43,259	0/0:4,0:17:40.20:0,40,229	0/0:6,0:13:29.08:0,29,188	1/1:1,17:19:41.44:329,41,0	1/1:5,14:19:35.94:295,36,0	0/0:18,0:18:51.12:0,51,538	1/1:2,17:21:49.48:382,49,0	0/0:11,0:11:30.07:0,30,315	0/0:9,0:9:18.05:0,18,192	0/0:10,0:10:27.07:0,27,288	0/0:2,0:8:17.04:0,17,84	0/0:1,0:12:26.92:0,27,132	0/0:2,0:10:22.73:0,23,114	1/1:1,18:19:47.87:386,48,0	0/1:14,2:16:7.18:7,0,342	0/0:20,1:21:26.49:0,26,487	0/0:9,0:9:24.06:0,24,256
chr10	45502242	.	C	CAAAA	3745.77	PASS	AB=0.835;AC=36;AF=0.643;AN=56;BaseQRankSum=1.000;DP=429;FS=0.647;HRun=15;HaplotypeScore=74.0796;InbreedingCoeff=0.6564;MQ=49.72;MQ0=14;MQRankSum=-7.117;QD=12.28;ReadPosRankSum=-3.682;VQSLOD=-0.7649;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:12,16:30:17.18:297,17,0	0/0:1,0:6:6.57:0,7,31	0/0:8,0:5:2.60:0,3,35	0/1:8,0:4:5.30:5,0,8	1/1:2,9:15:20.94:313,21,0	1/1:4,9:19:16.47:318,16,0	1/1:5,0:14:8.99:114,9,0	0/1:23,0:27:18.68:19,0,210	1/1:4,13:18:15.01:211,15,0	1/1:2,1:13:30.51:446,31,0	1/1:4,1:12:17.97:252,18,0	1/1:11,1:11:23.68:251,24,0	1/1:13,0:13:23.85:200,24,0	1/1:7,1:7:14.84:131,15,0	1/1:7,9:15:6.02:126,6,0	1/1:3,15:22:11.95:180,12,0	0/0:23,0:23:41.06:0,41,460	1/1:14,2:15:22.10:228,22,0	0/0:17,0:15:26.77:0,27,288	0/1:8,0:13:0.65:1,0,79	0/0:16,0:15:17.69:0,18,209	0/1:7,7:14:4.84:226,0,5	1/1:2,1:5:9.03:106,9,0	1/1:5,0:12:14.75:132,15,0	1/1:3,6:9:9.03:191,9,0	0/0:17,0:18:9.24:0,9,250	0/0:8,0:10:11.66:0,12,122	0/0:22,0:18:38.50:0,39,439
chr10	45502417	.	ATG	A	905.17	PASS	AB=0.824;AC=15;AF=0.268;AN=56;BaseQRankSum=-1.644;DP=366;FS=6.457;HRun=0;HaplotypeScore=70.8486;InbreedingCoeff=0.3304;MQ=59.49;MQ0=15;MQRankSum=-0.205;QD=7.24;ReadPosRankSum=-1.453;VQSLOD=2.2445;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:19:21:0,21,218	0/0:4,0:3:2.99:0,3,24	0/0:38,0:22:8.24:0,8,85	0/0:23,0:15:6.02:0,6,80	0/0:10,0:10:12.02:0,12,121	0/1:7,1:8:24.27:28,0,24	0/1:14,0:14:4.80:5,0,101	1/1:14,11:24:33.05:358,33,0	0/0:3,0:9:6:0,6,52	0/0:4,0:3:3.01:0,3,44	0/0:4,0:4:9.02:0,9,105	0/0:4,0:8:14.97:0,15,124	0/0:8,0:10:0:0,0,0	0/0:4,0:4:6.02:0,6,86	0/0:6,0:6:3.01:0,3,32	0/0:13,0:13:9.01:0,9,98	0/0:30,0:30:40.02:0,40,736	0/0:26,0:26:17.43:0,17,169	1/1:7,0:5:3.01:34,3,0	1/1:3,0:4:5.83:38,6,0	0/1:16,6:20:21.23:90,0,21	0/1:6,1:8:19.01:19,0,145	0/0:6,0:7:9.02:0,9,116	0/0:8,0:17:15.01:0,15,151	0/0:6,0:6:15.04:0,15,171	0/1:4,12:18:11.77:259,0,12	1/1:4,2:5:5.93:51,6,0	1/1:2,9:12:17.88:184,18,0
chr10	45502448	.	T	TGC	1043.11	PASS	AB=0.912;AC=21;AF=0.375;AN=56;BaseQRankSum=-1.072;DP=314;FS=6.654;HRun=0;HaplotypeScore=61.5081;InbreedingCoeff=-0.0068;MQ=50.47;MQ0=23;MQRankSum=-0.874;QD=7.19;ReadPosRankSum=0.790;VQSLOD=2.2543;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:14,0:14:42.61:43,0,90	1/1:4,0:4:2.94:18,3,0	0/0:22,0:5:2.65:0,3,21	0/0:26,0:5:14.09:0,14,125	1/1:1,7:7:12.04:211,12,0	1/1:2,3:5:2.04:51,2,0	1/1:7,3:10:12:176,12,0	0/0:29,0:28:83.02:0,83,692	0/1:8,0:8:13.92:46,0,14	1/1:3,0:3:8.72:52,9,0	0/1:2,3:5:17.04:115,0,17	0/1:8,0:8:32.34:54,0,32	0/0:7,0:7:5.99:0,6,50	0/1:5,0:4:11.84:12,0,35	0/0:4,2:5:2.80:0,3,13	0/1:4,2:6:25.33:37,0,25	0/0:33,0:32:57.30:0,57,773	0/1:23,2:26:28.20:186,0,28	0/0:10,0:9:26.90:0,27,223	0/0:2,0:2:3:0,3,25	0/0:12,0:9:14.95:0,15,120	0/1:5,0:5:5.97:6,0,106	0/0:6,0:5:5.15:0,5,41	0/1:9,0:9:26.17:69,0,26	0/1:5,2:7:11.68:112,0,12	0/1:20,1:20:19.43:19,0,262	0/0:3,0:2:3:0,3,26	0/0:13,0:13:26.96:0,27,224
chr10	45502469	.	GTATATATATATTA	G	289.12	PASS	AB=1.000;AC=7;AF=0.250;AN=28;BaseQRankSum=1.510;DP=240;FS=4.108;HRun=0;HaplotypeScore=75.9761;InbreedingCoeff=0.4893;MQ=48.86;MQ0=17;MQRankSum=-2.283;QD=7.81;ReadPosRankSum=-0.082;VQSLOD=1.4967;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:8:5.87:0,6,24	0/0:2,0:2:0:0,0,0	./.	./.	./.	./.	1/1:4,0:4:3.01:44,3,0	0/0:32,0:31:55.68:0,56,283	0/0:3,0:3:2.99:0,3,23	./.	1/1:4,0:4:3.01:40,3,0	0/0:6,0:6:2.80:0,3,13	0/1:6,0:6:0.11:0,0,0	0/0:5,0:4:2.68:0,3,11	./.	./.	0/0:29,0:29:69.14:0,69,2562	1/1:7,16:23:12:302,12,0	0/0:6,0:6:3.01:0,3,62	./.	./.	./.	./.	./.	./.	0/0:13,0:13:5.90:0,6,41	./.	0/0:12,0:12:18.06:0,18,634
chr10	45502480	.	TTA	T	1103.97	PASS	AC=20;AF=0.667;AN=30;BaseQRankSum=3.095;DP=176;FS=2.045;HRun=0;HaplotypeScore=31.8446;InbreedingCoeff=0.4847;MQ=47.83;MQ0=7;MQRankSum=2.104;QD=12.84;ReadPosRankSum=-3.038;VQSLOD=2.4613;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,3:7:5.91:76,6,0	1/1:0,1:1:1.25:3,1,0	0/0:11,0:3:0:0,0,0	./.	./.	./.	1/1:1,0:3:2.51:7,3,0	1/1:10,25:35:75.23:937,75,0	1/1:3,0:3:2.99:24,3,0	./.	1/1:2,0:2:0.89:2,1,0	1/1:2,2:4:3.01:38,3,0	0/0:2,0:2:0:0,0,0	1/1:2,0:2:3.01:38,3,0	./.	./.	0/0:26,0:26:71.73:0,72,1078	1/1:20,0:21:5.03:27,5,0	0/0:1,0:1:3.01:0,3,50	./.	./.	./.	./.	./.	./.	1/1:7,1:8:6:58,6,0	./.	0/0:12,0:12:21.07:0,21,336
chr10	45504413	.	TA	T	4037.79	PASS	AB=0.666;AC=46;AF=0.821;AN=56;BaseQRankSum=3.124;DP=612;FS=6.154;HRun=15;HaplotypeScore=93.3807;InbreedingCoeff=0.5948;MQ=78.98;MQ0=2;MQRankSum=-1.487;QD=7.62;ReadPosRankSum=2.293;VQSLOD=2.9604;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,11:16:6.12:166,6,0	0/0:9,2:12:1.57:0,2,127	0/0:29,1:25:12.54:0,13,127	0/0:17,0:14:5.77:0,6,34	1/1:10,0:25:34.67:101,35,0	1/1:4,0:22:33.42:96,33,0	1/1:3,3:20:32.32:115,32,0	1/1:12,21:34:11.03:301,11,0	0/1:10,5:15:10.85:46,0,11	1/1:3,0:18:32.77:95,33,0	1/1:11,0:21:22.32:65,22,0	1/1:9,15:24:35.40:231,35,0	1/1:6,18:24:17.66:226,18,0	1/1:5,15:20:38.31:250,38,0	1/1:8,0:30:45.96:132,46,0	1/1:9,0:38:63.54:182,64,0	0/0:18,0:22:44.52:0,45,359	1/1:5,0:16:26.97:80,27,0	1/1:4,14:19:36.83:226,37,0	1/1:8,19:28:25.74:281,26,0	1/1:4,13:18:39.99:243,40,0	1/1:2,14:17:28.28:171,28,0	1/1:10,11:23:26.72:164,27,0	1/1:2,13:15:23.60:154,24,0	1/1:3,0:14:1.97:56,2,0	1/1:11,13:24:15:223,15,0	0/1:9,22:32:26.81:223,0,27	1/1:3,12:15:32.48:211,32,0
chr10	45504459	.	C	CT	8753.58	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-4.621;DP=644;FS=1.799;HRun=1;HaplotypeScore=79.0940;InbreedingCoeff=0.9986;MQ=78.65;MQ0=0;MQRankSum=-5.328;QD=37.09;ReadPosRankSum=2.876;VQSLOD=5.4327;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:69.22:0,69,895	0/0:11,0:11:33.09:0,33,414	0/0:19,0:19:54.18:0,54,701	0/0:17,0:17:45.14:0,45,580	1/1:2,19:21:39.13:584,39,0	1/1:0,33:31:87.21:1253,87,0	1/1:3,18:21:51.16:745,51,0	0/0:43,0:43:99:0,126,1611	0/0:19,0:19:54.15:0,54,685	1/1:4,22:26:72.24:1076,72,0	1/1:5,15:20:45.11:645,45,0	0/0:30,0:30:84.27:0,84,1090	0/0:28,0:28:78.25:0,78,1010	0/0:17,0:17:51.17:0,51,660	1/1:2,42:44:99:1642,111,0	1/1:1,42:43:99:1773,120,0	0/0:18,0:18:42.14:0,42,545	1/1:0,14:14:36.12:539,36,0	0/0:17,0:17:48.16:0,48,623	0/0:22,0:22:63.19:0,63,804	0/0:18,0:18:54.15:0,54,685	0/0:21,0:21:60.20:0,60,779	0/0:18,0:18:45.15:0,45,584	0/0:20,0:20:60.20:0,60,779	1/1:2,12:14:33.11:494,33,0	0/0:20,1:21:18.23:0,18,734	0/0:34,0:34:96.31:0,96,1243	0/0:11,0:11:33.11:0,33,428
chr10	45505398	.	TAGG	T	9583.07	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=16.333;DP=786;FS=2.104;HRun=0;HaplotypeScore=111.3864;InbreedingCoeff=0.9999;MQ=88.40;MQ0=0;MQRankSum=-5.398;QD=40.95;ReadPosRankSum=4.471;VQSLOD=6.3614;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,120,2568	0/0:15,0:15:42.14:0,42,926	0/0:33,0:33:84.29:0,84,1754	0/0:25,0:25:63.21:0,63,1327	1/1:1,18:19:42.14:675,42,0	1/1:0,22:22:63.21:1012,63,0	1/1:3,24:27:60.20:964,60,0	0/0:26,0:26:69.24:0,69,1521	0/0:28,0:28:81.27:0,81,1747	1/1:2,23:25:66.22:1061,66,0	1/1:2,12:14:30.10:482,30,0	0/0:31,0:31:84.27:0,84,1801	0/0:20,0:20:60.21:0,60,1315	0/0:23,0:23:60.19:0,60,1282	1/1:3,36:39:99:1591,99,0	1/1:1,35:36:99:1591,99,0	0/0:46,0:46:99:0,120,2604	1/1:1,25:26:75.26:1205,75,0	0/0:16,0:16:45.15:0,45,980	0/0:29,0:29:84.25:0,84,1702	0/0:48,0:48:99:0,138,3024	0/0:37,0:37:99:0,99,2138	0/0:24,0:24:72.23:0,72,1533	0/0:33,0:33:93.32:0,93,2032	1/1:4,22:26:63.21:1002,63,0	0/0:27,1:28:36.06:0,36,1737	0/0:33,0:33:93.32:0,93,2036	0/0:14,0:14:39.13:0,39,851
chr10	45506000	.	C	CTGCA	5229.18	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-8.260;DP=560;FS=0.473;HRun=0;HaplotypeScore=89.9208;InbreedingCoeff=0.9410;MQ=64.17;MQ0=1;MQRankSum=-3.240;QD=55.04;ReadPosRankSum=0.471;VQSLOD=5.7819;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,141,2595	0/0:9,0:9:27.09:0,27,500	0/0:4,0:4:6.02:0,6,111	0/0:6,0:6:10.25:0,10,81	0/0:14,0:14:36.12:0,36,658	0/0:18,0:18:51.17:0,51,941	0/0:32,0:32:84.25:0,84,1492	0/0:17,0:17:45.08:0,45,714	0/0:25,0:25:72.25:0,72,1342	0/0:10,0:10:30.10:0,30,560	0/0:6,0:6:15.05:0,15,280	0/0:30,0:30:87.30:0,87,1623	0/0:27,0:27:75.23:0,75,1341	0/0:16,0:16:42.13:0,42,740	0/0:23,0:23:63.22:0,63,1175	0/0:26,0:26:72.25:0,72,1344	0/0:21,0:21:54.19:0,54,997	0/0:26,0:26:78.27:0,78,1455	1/1:5,16:26:72.23:1648,72,0	1/1:1,6:7:9.03:240,9,0	1/1:7,28:35:63.15:1680,63,0	0/0:24,0:24:69.24:0,69,1278	0/0:13,0:13:33.11:0,33,595	0/0:32,0:32:90.31:0,90,1666	0/0:13,0:13:39.13:0,39,728	0/0:25,0:25:69.24:0,69,1287	1/1:4,17:21:51.17:1355,51,0	1/1:2,3:5:12.04:306,12,0
chr10	45506877	.	TACACA	T	2196.76	PASS	AB=0.542;AC=3;AF=0.054;AN=56;BaseQRankSum=9.525;DP=610;FS=3.693;HRun=0;HaplotypeScore=109.9758;InbreedingCoeff=0.6398;MQ=71.57;MQ0=0;MQRankSum=-4.101;QD=40.68;ReadPosRankSum=-2.323;VQSLOD=3.2982;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,138,3779	0/0:7,0:7:18.06:0,18,514	0/0:16,0:16:21.04:0,21,573	0/0:10,0:9:21.04:0,21,521	0/0:25,0:25:72.25:0,72,2191	0/0:11,0:11:30.10:0,30,916	0/0:20,0:20:57.20:0,57,1680	1/1:4,24:27:63.12:1080,63,0	0/0:19,0:18:51.17:0,51,1502	0/0:22,0:22:60.21:0,60,1806	0/0:14,0:14:36.12:0,36,1074	0/0:19,0:19:51.18:0,51,1553	0/0:17,0:17:45.14:0,45,1248	0/0:17,0:17:48.16:0,48,1415	0/0:23,0:23:66.19:0,66,1763	0/0:23,0:23:69.22:0,69,1952	0/0:45,0:45:99:0,126,3705	0/0:23,0:23:66.23:0,66,1960	0/0:15,0:15:42.14:0,42,1227	0/0:16,0:16:42.12:0,42,1149	0/0:41,0:41:99:0,108,3152	0/0:11,0:11:30.10:0,30,902	0/0:16,0:16:45.15:0,45,1345	0/0:33,0:33:78.27:0,78,2357	0/0:22,0:22:57.20:0,57,1740	0/1:4,22:26:99:1223,0,114	0/0:18,0:18:48.16:0,48,1465	0/0:23,0:23:69.24:0,69,2092
chr10	45506985	.	TA	T	1943.48	PASS	AB=0.955;AC=32;AF=0.571;AN=56;BaseQRankSum=-1.395;DP=488;FS=8.457;HRun=12;HaplotypeScore=98.8870;InbreedingCoeff=0.4749;MQ=69.26;MQ0=6;MQRankSum=-0.161;QD=6.89;ReadPosRankSum=-0.156;VQSLOD=2.0120;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:20:26.24:202,26,0	1/1:5,3:8:14.36:99,14,0	0/0:42,0:14:1.12:0,1,29	0/1:26,0:11:11.80:12,0,42	0/0:24,0:26:50.03:0,50,371	0/0:20,1:21:30.86:0,31,483	0/0:15,0:15:30.04:0,30,296	0/1:32,4:34:11.37:306,0,11	1/1:6,0:6:5.19:30,5,0	0/1:15,0:15:5.91:6,0,83	0/1:4,1:7:8.19:8,0,75	1/1:8,1:9:15.27:107,15,0	1/1:10,0:10:8.72:53,9,0	0/1:10,0:10:29.13:72,0,29	0/0:23,0:24:43.72:0,44,336	0/0:17,0:17:41.51:0,42,316	0/0:36,0:36:96.06:0,96,915	0/0:10,0:10:20.85:0,21,178	1/1:6,13:21:39.90:284,40,0	1/1:8,9:18:28.89:215,29,0	1/1:3,1:4:2.99:23,3,0	1/1:10,0:10:3.92:40,4,0	1/1:11,1:12:22.36:124,22,0	1/1:11,2:13:5.37:107,5,0	0/0:15,0:15:23.43:0,23,167	0/1:19,1:20:24.02:97,0,24	1/1:19,5:25:17.23:192,17,0	1/1:10,1:9:20.91:162,21,0
chr10	45506995	.	A	AAC	1212.13	PASS	AB=0.844;AC=15;AF=0.268;AN=56;BaseQRankSum=1.063;DP=503;FS=11.278;HRun=0;HaplotypeScore=112.3717;InbreedingCoeff=0.5119;MQ=59.61;MQ0=11;MQRankSum=2.265;QD=7.77;ReadPosRankSum=-0.527;VQSLOD=2.1708;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:15,4:18:9.18:261,9,0	0/0:6,0:6:11.91:0,12,61	0/0:48,0:12:13.65:0,14,132	0/1:33,0:11:2.39:2,0,97	0/0:24,0:24:50.78:0,51,593	0/0:21,0:21:60.10:0,60,736	0/0:16,0:16:39.09:0,39,474	0/1:39,0:35:99:131,0,135	1/1:8,0:7:4.02:45,4,0	0/0:20,0:19:23.75:0,24,215	0/0:6,0:6:9.72:0,10,102	1/1:7,1:8:16.30:148,16,0	0/1:5,5:10:11.43:70,0,11	0/1:7,1:8:34.61:131,0,35	0/0:21,0:21:51.04:0,51,598	0/0:20,0:20:42.13:0,42,537	0/0:38,0:38:99:0,114,1347	0/0:12,0:12:21.06:0,21,260	0/0:18,0:17:10.21:0,10,187	0/0:18,0:18:41.54:0,42,291	0/0:4,0:3:8.94:0,9,67	0/1:3,3:6:7.95:98,0,8	1/1:7,3:10:25.02:291,25,0	1/1:14,1:15:14.37:210,14,0	0/0:18,0:18:23.98:0,24,249	0/0:24,0:24:21.87:0,22,192	0/0:22,0:21:25.63:0,26,303	0/0:11,0:9:18.17:0,18,106
chr10	45506996	.	A	AC	651.90	PASS	AB=0.965;AC=14;AF=0.250;AN=56;BaseQRankSum=2.193;DP=505;FS=21.751;HRun=0;HaplotypeScore=108.2899;InbreedingCoeff=0.1910;MQ=58.68;MQ0=11;MQRankSum=-0.218;QD=3.93;ReadPosRankSum=0.117;VQSLOD=1.5270;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:17,1:17:15.48:115,0,15	0/0:6,0:6:7.54:0,8,39	0/0:48,0:12:19.66:0,20,154	0/0:32,0:10:10.13:0,10,120	0/0:23,0:23:44.34:0,44,534	0/0:21,0:21:60.02:0,60,736	0/0:15,0:15:39.09:0,39,473	0/1:38,1:36:96.56:133,0,97	0/0:8,0:7:3.53:0,4,9	0/0:21,0:20:21.68:0,22,196	0/1:6,0:6:1.25:1,0,70	1/1:9,0:9:4.45:76,4,0	0/1:9,1:10:21.62:28,0,22	0/1:7,1:8:44.91:74,0,45	0/0:21,0:21:50.71:0,51,545	0/0:20,0:20:41.69:0,42,487	0/0:38,0:38:99:0,113,1315	0/0:12,0:12:21.06:0,21,265	0/1:19,0:18:1.45:1,0,141	0/0:18,0:18:40.72:0,41,245	0/0:4,0:3:8.87:0,9,62	0/1:7,0:7:5.23:77,0,5	1/1:9,1:10:25.11:158,25,0	1/1:15,0:15:0.69:110,1,0	0/0:18,0:18:25.79:0,26,244	0/1:23,0:24:28.12:28,0,117	0/0:23,0:22:39.65:0,40,261	0/0:11,0:9:18.06:0,18,96
chr10	45506997	.	AC	A	1365.63	PASS	AB=0.977;AC=30;AF=0.536;AN=56;BaseQRankSum=4.140;DP=510;FS=6.253;HRun=1;HaplotypeScore=104.7891;InbreedingCoeff=0.3668;MQ=58.65;MQ0=11;MQRankSum=-1.466;QD=4.10;ReadPosRankSum=-1.939;VQSLOD=-0.4528;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:17:14.67:122,15,0	1/1:5,1:6:6.02:54,6,0	0/1:46,3:12:19.66:32,0,20	0/1:32,0:10:6.04:6,0,82	0/0:23,0:23:10.62:0,11,125	0/0:20,0:20:20.62:0,21,472	0/0:15,0:15:17.51:0,18,302	1/1:39,0:35:40.98:240,41,0	1/1:8,0:7:5.58:38,6,0	0/1:21,0:20:20.71:21,0,53	0/0:7,0:7:1.06:0,1,44	1/1:9,0:9:19.20:122,19,0	1/1:10,0:10:17.61:127,18,0	1/1:8,0:8:8.29:59,8,0	0/0:22,0:22:11.37:0,11,96	0/0:21,0:21:26.71:0,27,183	0/0:39,0:39:75.43:0,75,778	0/0:12,0:12:16.56:0,17,117	0/1:20,0:19:35.40:35,0,53	0/1:17,1:18:20.34:57,0,20	0/1:4,0:3:12.82:13,0,15	1/1:7,0:7:14.86:95,15,0	1/1:10,0:10:24.41:123,24,0	1/1:15,0:15:22.49:141,22,0	0/0:18,0:18:8.73:0,9,90	1/1:24,0:24:38.52:203,39,0	0/1:22,2:23:57.88:67,0,58	0/1:11,0:9:4.68:5,0,17
chr10	45506998	.	C	CA	1081.97	PASS	AB=0.994;AC=25;AF=0.446;AN=56;BaseQRankSum=0.635;DP=523;FS=4.443;HRun=12;HaplotypeScore=110.9579;InbreedingCoeff=0.6155;MQ=58.11;MQ0=12;MQRankSum=1.832;QD=3.96;ReadPosRankSum=-4.186;VQSLOD=0.6316;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:19:19.60:91,20,0	0/1:6,0:6:10.02:79,0,10	0/1:52,0:12:3.74:4,0,25	0/1:33,0:10:26.04:26,0,39	0/0:24,0:24:12.86:0,13,98	0/0:19,0:20:52.05:0,52,402	0/0:15,0:15:27.40:0,27,240	1/1:36,4:36:13.09:312,13,0	1/1:8,0:7:5.25:23,5,0	0/1:21,0:20:4.46:4,0,65	0/1:8,0:8:6.37:6,0,13	1/1:9,0:9:15.54:73,16,0	1/1:9,0:9:9.49:51,9,0	1/1:8,0:8:12.02:72,12,0	0/0:20,0:21:36.54:0,37,183	0/0:21,0:21:36.88:0,37,207	0/0:39,0:39:65.71:0,66,578	0/0:13,0:13:12.78:0,13,71	0/0:18,0:18:7.69:0,8,216	0/0:18,0:18:40.42:0,40,282	0/0:4,0:3:7.80:0,8,52	1/1:7,0:7:14.12:75,14,0	1/1:12,0:12:21.44:89,21,0	1/1:15,0:15:19.39:88,19,0	0/0:19,0:19:14.53:0,15,76	1/1:20,4:24:7.85:289,8,0	0/0:24,0:23:31.87:0,32,290	0/0:13,0:11:11.73:0,12,81
chr10	45507009	.	CA	C	2452.95	PASS	AB=0.750;AC=40;AF=0.714;AN=56;BaseQRankSum=3.082;DP=511;FS=0.000;HRun=12;HaplotypeScore=101.7032;InbreedingCoeff=0.4805;MQ=64.50;MQ0=12;MQRankSum=-3.207;QD=7.91;ReadPosRankSum=5.066;VQSLOD=2.5241;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:15,5:20:54.74:73,0,55	0/1:5,1:6:15.37:71,0,15	0/0:54,0:13:24.76:0,25,199	0/0:44,0:15:13.57:0,14,101	1/1:2,0:17:14.66:145,15,0	1/1:5,12:19:47.52:328,48,0	1/1:2,13:15:32.86:254,33,0	0/0:26,0:32:51.46:0,51,344	1/1:7,0:6:2.96:21,3,0	1/1:1,0:17:17.58:143,18,0	0/0:1,0:5:0:0,0,0	0/1:6,3:9:5.68:51,0,6	1/1:7,1:8:4.41:65,4,0	1/1:3,2:5:0.91:36,1,0	1/1:0,0:18:26.46:83,26,0	1/1:0,0:18:19.97:62,20,0	0/0:36,0:36:74.10:0,74,858	1/1:1,0:12:7.31:30,7,0	1/1:12,7:18:7.42:229,7,0	1/1:3,17:20:14.78:276,15,0	1/1:4,2:5:14.92:112,15,0	1/1:2,6:8:11.54:62,12,0	1/1:10,4:14:15.26:124,15,0	1/1:12,3:15:4.15:88,4,0	1/1:1,0:18:9.03:29,9,0	0/0:9,0:26:47.63:0,48,262	1/1:5,17:21:38.44:287,38,0	0/1:5,11:14:16.44:61,0,16
chr10	45507010	.	A	AC	517.87	PASS	AB=0.948;AC=16;AF=0.286;AN=56;BaseQRankSum=2.811;DP=512;FS=0.000;HRun=1;HaplotypeScore=108.9227;InbreedingCoeff=0.3782;MQ=64.74;MQ0=12;MQRankSum=1.453;QD=3.86;ReadPosRankSum=-0.010;VQSLOD=-0.0532;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:11,9:20:62.89:116,0,63	0/0:6,0:6:8.64:0,9,73	0/0:55,0:13:18.26:0,18,199	0/0:46,0:15:1.32:0,1,141	0/0:17,0:17:5.42:0,5,105	0/0:19,0:19:52.48:0,52,330	0/0:14,0:14:32.88:0,33,183	0/0:35,0:31:20.72:0,21,308	1/1:3,1:6:5.81:47,6,0	0/1:18,0:17:18.90:30,0,19	0/1:5,0:5:0.03:0,0,0	1/1:9,0:9:1.39:74,1,0	0/1:8,0:8:2.52:15,0,3	1/1:4,1:5:1.98:81,2,0	0/0:18,0:18:32.87:0,33,145	0/0:18,0:18:24.24:0,24,113	0/0:35,0:35:99:0,99,1276	0/0:12,0:12:8.49:0,8,45	0/0:21,0:20:33.41:0,33,240	0/0:20,0:20:42.88:0,43,269	0/0:6,0:5:10.94:0,11,58	0/1:8,0:8:7.81:56,0,8	1/1:8,0:14:14.78:158,15,0	1/1:12,0:14:5.24:72,5,0	0/0:18,0:18:10.94:0,11,47	0/1:26,0:26:27.02:27,0,100	0/0:22,0:21:40.86:0,41,259	0/0:16,0:14:14.73:0,15,111
chr10	45507600	.	GTT	G	1842.25	PASS	AB=0.583;AC=15;AF=0.268;AN=56;BaseQRankSum=-1.760;DP=677;FS=4.315;HRun=17;HaplotypeScore=101.0230;InbreedingCoeff=0.6550;MQ=72.20;MQ0=10;MQRankSum=0.101;QD=8.61;ReadPosRankSum=6.888;VQSLOD=1.2530;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:27:51.77:0,52,491	0/0:5,0:10:26.95:0,27,248	0/0:63,0:27:5.75:0,6,213	0/0:47,0:22:7.56:0,8,162	1/1:4,15:26:13.18:278,13,0	1/1:7,17:31:21.42:295,21,0	1/1:8,11:21:13.06:182,13,0	0/0:34,0:34:58.60:0,59,399	0/0:4,0:20:30.02:0,30,293	1/1:14,12:26:8.53:195,9,0	1/1:5,12:19:30.58:265,31,0	0/0:10,0:19:35.97:0,36,329	0/0:9,0:15:30.06:0,30,313	0/0:7,0:16:21:0,21,215	1/1:9,18:29:37.99:284,38,0	0/1:4,17:25:32.74:286,0,33	0/0:22,0:27:61.86:0,62,687	0/1:7,8:18:32.02:124,0,32	0/0:16,1:21:3.88:0,4,262	0/0:22,0:24:31.97:0,32,487	0/0:13,0:14:23.38:0,23,255	0/0:10,0:20:39.59:0,40,358	0/0:11,0:20:32.04:0,32,287	0/0:10,0:19:23.24:0,23,210	0/1:5,11:17:8.43:119,0,8	0/0:22,0:22:47.06:0,47,304	0/0:24,2:26:9.27:0,9,518	0/0:12,1:16:16.34:0,16,335
chr10	45508871	.	A	ACTCCCCAAT	60715.49	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-5.560;DP=606;FS=2.065;HRun=0;HaplotypeScore=156.4570;InbreedingCoeff=0.9979;MQ=80.33;MQ0=0;MQRankSum=-13.523;QD=116.76;ReadPosRankSum=2.122;VQSLOD=5.6331;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,18:24:69.24:3157,69,0	1/1:2,11:14:35.72:1718,36,0	0/0:31,0:30:81.25:0,81,2235	0/0:20,0:20:51.65:0,52,1489	1/1:5,14:19:36.11:1584,36,0	1/1:3,15:20:54.18:2610,54,0	1/1:3,14:20:51.18:2469,51,0	1/1:15,11:31:93.28:3956,93,0	1/1:2,15:17:51.17:2350,51,0	1/1:3,19:23:69.21:3169,69,0	1/1:0,10:13:27.09:1323,27,0	1/1:6,21:30:78.27:3667,78,0	1/1:8,15:26:69.02:3100,69,0	1/1:5,14:19:54.18:2366,54,0	1/1:7,17:27:72.25:3364,72,0	1/1:4,15:20:57.20:2709,57,0	0/0:35,0:35:96.33:0,96,3025	1/1:6,6:12:33.11:1392,33,0	1/1:9,6:18:51.18:2205,51,0	1/1:4,13:18:48.04:2001,48,0	1/1:12,3:21:32.72:1320,33,0	1/1:4,17:24:57.19:2498,57,0	1/1:1,12:15:42.14:1648,42,0	1/1:2,11:17:24.08:789,24,0	1/1:5,15:21:60.20:2537,60,0	1/1:7,17:25:75.26:3505,75,0	1/1:6,20:32:84.29:4068,84,0	1/1:0,8:11:24.08:1212,24,0
chr10	45509189	.	G	GACTC	4301.82	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-9.928;DP=717;FS=3.076;HRun=0;HaplotypeScore=115.0560;InbreedingCoeff=0.9993;MQ=79.24;MQ0=0;MQRankSum=-3.450;QD=58.93;ReadPosRankSum=-4.104;VQSLOD=5.3400;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:93.32:0,93,1700	0/0:15,0:15:45.13:0,45,790	0/0:12,0:12:29.27:0,29,543	0/0:25,0:25:53.99:0,54,813	0/0:23,0:23:60.21:0,60,1104	0/0:27,0:27:78.25:0,78,1370	0/0:27,0:27:66.23:0,66,1213	1/1:17,20:41:90.28:2151,90,0	0/0:21,0:21:60.21:0,60,1102	0/0:33,0:33:87.30:0,87,1593	0/0:18,0:18:48.16:0,48,882	0/0:33,0:33:99:0,99,1815	0/0:20,0:20:57.18:0,57,1011	0/0:20,0:20:57.16:0,57,972	0/0:34,0:34:96.33:0,96,1759	0/0:42,0:42:99:0,120,2164	0/0:17,0:17:48.16:0,48,883	0/0:20,0:20:57.20:0,57,1049	0/0:20,0:20:60.19:0,60,1035	0/0:29,0:29:78.27:0,78,1433	0/0:45,0:45:99:0,123,2136	0/0:14,0:14:33.11:0,33,603	0/0:15,0:15:39.13:0,39,709	0/0:26,0:26:60.21:0,60,1104	0/0:26,0:26:75.26:0,75,1374	1/1:4,28:32:32.08:2151,32,0	0/0:36,0:36:99:0,102,1870	0/0:14,0:14:39.13:0,39,704
chr10	45511221	.	T	TACCTA	1023.42	PASS	AC=14;AF=0.259;AN=54;BaseQRankSum=6.580;DP=392;FS=34.414;HRun=0;HaplotypeScore=78.2672;InbreedingCoeff=0.8222;MQ=59.95;MQ0=1;MQRankSum=-5.518;QD=33.01;ReadPosRankSum=1.155;VQSLOD=1.7110;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,4:4:12.04:322,12,0	0/0:5,0:5:12.04:0,12,279	0/0:16,0:15:45.15:0,45,1030	0/0:25,0:21:50.55:0,51,1040	0/0:8,0:8:21.07:0,21,489	0/0:31,0:31:90.30:0,90,1990	0/0:19,0:19:57.16:0,57,1237	0/0:22,0:22:66.20:0,66,1411	1/1:0,5:3:3.01:75,3,0	0/0:16,0:16:48.15:0,48,1074	0/0:6,0:6:12.04:0,12,249	1/1:0,6:7:9.03:235,9,0	1/1:0,7:6:9.03:242,9,0	1/1:0,4:4:3.01:74,3,0	0/0:26,0:26:78.27:0,78,1817	0/0:16,0:16:42.11:0,42,888	0/0:35,0:34:99:0,102,2327	0/0:28,0:28:78.17:0,78,1668	0/0:22,0:22:66.22:0,66,1489	0/0:4,0:4:9.02:0,9,165	0/0:31,0:31:87.30:0,87,1998	./.	1/1:0,1:1:3.01:80,3,0	1/1:0,3:3:6.02:159,6,0	0/0:6,0:6:18.06:0,18,419	0/0:15,0:15:45.14:0,45,1005	0/0:16,0:14:42.14:0,42,971	0/0:12,0:12:33.11:0,33,766
chr10	45511222	.	G	GGA	444.04	PASS	AC=14;AF=0.259;AN=54;BaseQRankSum=6.444;DP=388;FS=31.683;HRun=0;HaplotypeScore=55.3478;InbreedingCoeff=0.8270;MQ=59.84;MQ0=1;MQRankSum=-6.107;QD=14.32;ReadPosRankSum=-0.145;VQSLOD=1.6087;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,4:4:12.04:167,12,0	0/0:5,0:5:12.04:0,12,196	0/0:17,0:15:45.15:0,45,680	0/0:25,0:21:59.65:0,60,761	0/0:8,0:8:21.07:0,21,342	0/0:31,0:31:93.29:0,93,1452	0/0:18,0:18:54.18:0,54,881	0/0:21,0:21:63.22:0,63,1026	1/1:0,5:3:3.01:35,3,0	0/0:15,0:15:45.15:0,45,734	0/0:6,0:6:12.04:0,12,195	1/1:0,7:7:9.03:120,9,0	1/1:0,7:6:9.03:126,9,0	1/1:0,4:4:3.01:36,3,0	0/0:26,0:26:78.27:0,78,1273	0/0:15,0:15:42.13:0,42,661	0/0:35,0:34:99:0,102,1658	0/0:26,0:26:75.26:0,75,1207	0/0:22,0:22:66.23:0,66,1077	0/0:4,0:4:12.03:0,12,168	0/0:31,0:31:93.28:0,93,1449	./.	1/1:0,1:1:3.01:42,3,0	1/1:0,3:3:6.02:82,6,0	0/0:6,0:6:18.06:0,18,294	0/0:15,0:15:45.15:0,45,730	0/0:16,0:14:42.14:0,42,685	0/0:12,0:12:33.11:0,33,537
chr10	45511255	.	G	GGGA	92.07	PASS	AB=1.000;AC=7;AF=0.135;AN=52;BaseQRankSum=4.486;DP=368;FS=5.280;HRun=0;HaplotypeScore=76.4944;InbreedingCoeff=0.5173;MQ=63.44;MQ0=4;MQRankSum=-3.137;QD=3.41;ReadPosRankSum=-2.413;VQSLOD=0.9897;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:1,0:1:2.74:0,3,12	0/0:8,0:8:18.05:0,18,312	0/1:20,0:6:16.70:17,0,73	0/0:20,0:11:15.02:0,15,230	0/0:12,0:11:27.09:0,27,467	0/0:29,0:28:84.27:0,84,1456	0/0:16,0:16:33.90:0,34,700	0/0:22,0:21:56.99:0,57,964	1/1:2,2:3:6.02:126,6,0	0/0:18,0:18:42.08:0,42,668	0/0:8,0:8:14.94:0,15,234	0/0:4,1:4:1.23:0,1,9	./.	0/0:2,0:2:4.72:0,5,17	0/0:25,0:25:57.14:0,57,1019	0/0:11,0:11:33.11:0,33,588	0/0:33,0:33:93.31:0,93,1696	0/0:24,0:24:69.20:0,69,1187	0/0:21,0:21:51.09:0,51,834	0/0:7,0:6:12.01:0,12,222	0/0:20,0:20:57.18:0,57,994	./.	1/1:1,1:1:3.01:54,3,0	1/1:1,0:1:1.82:5,2,0	0/0:7,0:7:18.04:0,18,335	0/0:19,0:19:57.11:0,57,925	0/0:21,0:19:30.81:0,31,645	0/0:9,0:9:24.08:0,24,446
chr10	45511263	.	G	GA	539.97	PASS	AB=0.812;AC=10;AF=0.208;AN=48;BaseQRankSum=-0.935;DP=377;FS=11.861;HRun=12;HaplotypeScore=47.6360;InbreedingCoeff=0.2610;MQ=69.38;MQ0=3;MQRankSum=-0.196;QD=6.00;ReadPosRankSum=-3.468;VQSLOD=-0.1559;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,0:1:0.89:2,1,0	0/0:10,0:10:20.26:0,20,139	0/0:21,0:7:10.22:0,10,65	0/1:20,0:12:13.09:13,0,14	0/0:13,0:12:16.62:0,17,147	0/0:26,0:26:73.42:0,73,520	0/0:18,0:18:5.62:0,6,184	0/1:10,13:23:10.74:252,0,11	./.	0/0:13,2:15:6.46:0,6,202	0/0:9,0:11:28.79:0,29,185	1/1:5,0:4:3.33:8,3,0	./.	0/0:2,0:2:1.22:0,1,5	0/0:25,0:25:57.61:0,58,400	0/0:17,0:16:41.66:0,42,301	0/0:28,0:32:68.57:0,69,467	0/0:20,1:21:9.46:0,9,226	0/0:16,0:19:35.86:0,36,233	0/0:7,0:6:11.36:0,11,72	0/0:17,0:17:29.79:0,30,216	./.	./.	1/1:1,0:1:1.55:4,2,0	0/0:8,0:8:20.71:0,21,152	0/1:8,16:24:29.18:366,0,29	0/0:19,0:17:39.09:0,39,276	0/1:15,0:15:0.29:0,0,151
chr10	45517901	.	T	TATGG	9261.90	PASS	AB=0.756;AC=18;AF=0.321;AN=56;BaseQRankSum=-12.823;DP=581;FS=1.208;HRun=0;HaplotypeScore=99.5731;InbreedingCoeff=0.8574;MQ=90.82;MQ0=0;MQRankSum=-3.506;QD=47.99;ReadPosRankSum=3.085;VQSLOD=5.7847;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,135,2402	0/0:10,0:10:30.10:0,30,552	0/0:20,0:20:60.17:0,60,1028	0/0:28,0:28:75.17:0,75,1221	1/1:7,16:23:24.05:633,24,0	1/1:3,14:18:42.10:1049,42,0	1/1:5,16:21:48.16:1260,48,0	0/0:35,0:35:93.28:0,93,1619	0/0:19,0:19:57.18:0,57,1018	0/1:5,16:21:4.02:1185,0,4	1/1:3,12:16:32.95:739,33,0	0/0:22,0:22:63.22:0,63,1153	0/0:17,0:17:48.15:0,48,853	0/0:23,0:23:66.21:0,66,1183	1/1:5,24:29:68.63:1757,69,0	1/1:3,15:18:48.12:1202,48,0	0/0:23,0:23:69.17:0,69,1174	1/1:6,15:21:42.57:1007,43,0	0/0:14,0:14:39.13:0,39,688	0/0:14,0:14:33.11:0,33,592	0/0:29,0:29:81.28:0,81,1482	0/0:20,0:20:60.19:0,60,1074	0/0:14,0:13:30.10:0,30,552	0/0:21,0:21:63.19:0,63,1100	1/1:1,8:8:15.05:395,15,0	0/1:16,1:17:33.89:34,0,696	0/0:22,0:22:66.18:0,66,1116	0/0:10,0:10:30.10:0,30,552
chr10	45521760	.	T	TACTC	25843.28	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-4.228;DP=496;FS=3.283;HRun=0;HaplotypeScore=86.2324;InbreedingCoeff=0.9548;MQ=83.32;MQ0=2;MQRankSum=-10.715;QD=59.55;ReadPosRankSum=4.329;VQSLOD=6.3401;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,13:17:23.65:553,24,0	1/1:1,3:4:12.04:317,12,0	0/0:24,0:24:63.16:0,63,1029	0/0:17,0:17:45.11:0,45,787	1/1:2,13:17:36.12:924,36,0	1/1:0,17:17:39.13:1006,39,0	1/1:6,18:26:51.18:1370,51,0	1/1:8,23:34:99:2333,99,0	1/1:0,11:11:30.10:763,30,0	1/1:2,8:10:27.08:673,27,0	1/1:2,15:17:36.12:924,36,0	1/1:1,13:15:27.09:717,27,0	1/1:1,12:13:30.10:807,30,0	1/1:0,14:17:39.13:1003,39,0	1/1:2,25:27:63.22:1683,63,0	1/1:0,20:20:57.20:1522,57,0	0/0:21,0:21:60.18:0,60,1087	1/1:2,19:21:48.16:1249,48,0	1/1:0,4:4:11.53:210,12,0	1/1:1,21:23:54.18:1385,54,0	1/1:8,18:26:47.77:1293,48,0	1/1:2,18:20:36.12:917,36,0	1/1:2,9:11:24.08:645,24,0	1/1:0,8:9:9.03:242,9,0	1/1:2,15:18:45.15:1153,45,0	1/1:0,22:22:66.23:1778,66,0	1/1:0,14:15:39.13:1003,39,0	1/1:0,18:18:51.18:1375,51,0
chr10	45521904	.	AGC	A	780.05	PASS	AB=0.964;AC=20;AF=0.357;AN=56;BaseQRankSum=9.201;DP=594;FS=1.366;HRun=0;HaplotypeScore=155.7188;InbreedingCoeff=0.8148;MQ=62.26;MQ0=0;MQRankSum=-7.432;QD=5.07;ReadPosRankSum=0.508;VQSLOD=2.8427;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,28:29:24.03:267,24,0	1/1:9,2:11:9.01:93,9,0	0/1:9,0:8:2.29:2,0,87	0/1:12,0:8:3.96:4,0,14	0/0:22,0:22:63.16:0,63,1015	0/0:26,0:26:69.21:0,69,1115	0/0:36,0:36:87.26:0,87,1460	0/0:29,0:29:65.78:0,66,995	1/1:0,12:12:14.99:130,15,0	0/0:19,0:19:51.05:0,51,769	0/0:16,0:16:33.11:0,33,562	1/1:4,9:13:11.20:93,11,0	1/1:2,4:6:14.20:116,14,0	1/1:3,9:12:8.92:85,9,0	0/0:29,0:29:69.24:0,69,1175	0/0:25,0:25:60.19:0,60,997	0/0:31,0:31:90.22:0,90,1439	0/0:36,0:36:99:0,99,1631	0/0:14,0:14:27.09:0,27,463	0/0:14,0:14:30.08:0,30,452	0/0:36,0:36:99:0,99,1590	1/1:3,13:16:12:107,12,0	1/1:5,6:11:6:54,6,0	1/1:3,18:21:2.99:25,3,0	0/0:24,0:24:63.10:0,63,976	0/0:38,0:38:99:0,102,1679	0/0:16,0:16:42.03:0,42,652	0/0:29,0:29:84.27:0,84,1409
chr10	45521911	.	GCGCACACACGAGAGCGCACACACACA	G	5074.61	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=8.739;DP=578;FS=0.000;HRun=0;HaplotypeScore=399.6029;InbreedingCoeff=0.9315;MQ=59.63;MQ0=2;MQRankSum=-7.900;QD=44.91;ReadPosRankSum=3.271;VQSLOD=2.3431;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:29:24.08:1016,24,0	1/1:2,6:8:9.03:483,9,0	0/0:13,0:9:24.18:0,24,550	0/0:15,0:10:26.62:0,27,1040	0/0:23,0:23:66.17:0,66,4088	0/0:26,0:26:72.22:0,72,4700	0/0:35,0:35:93.28:0,93,5077	0/0:32,0:32:80.84:0,81,3850	1/1:12,0:12:15.05:810,15,0	0/0:21,0:21:60.08:0,60,3339	0/0:16,0:16:36.12:0,36,2380	1/1:11,0:11:12.04:515,12,0	1/1:5,0:5:15.02:625,15,0	1/1:9,0:9:9.03:454,9,0	0/0:26,0:26:75.26:0,75,6057	0/0:23,0:23:69.22:0,69,4108	0/0:32,0:32:93.24:0,93,7186	0/0:35,0:35:99:0,102,7117	0/0:15,0:15:39.13:0,39,2262	0/0:12,0:12:30.08:0,30,1861	0/0:40,0:40:99:0,117,9468	1/1:13,0:13:12.04:650,12,0	1/1:7,0:7:6.02:326,6,0	1/1:19,0:19:5.90:197,6,0	0/0:23,0:23:66.16:0,66,5032	0/0:34,0:34:99:0,102,7302	0/0:15,0:15:42.03:0,42,3187	0/0:28,0:28:84.27:0,84,7301
chr10	45521921	.	GAGAGCGCACACACACACACACA	G	5358.67	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=9.110;DP=585;FS=0.656;HRun=0;HaplotypeScore=372.3167;InbreedingCoeff=0.9296;MQ=59.89;MQ0=5;MQRankSum=-8.429;QD=55.82;ReadPosRankSum=5.517;VQSLOD=2.8397;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:17,6:23:23.61:1056,24,0	1/1:6,2:8:9.03:448,9,0	0/0:24,0:15:38.56:0,39,1247	0/0:20,0:11:26.11:0,26,1046	0/0:22,0:22:66.23:0,66,3417	0/0:24,0:24:66.21:0,66,3734	0/0:39,0:39:99:0,105,4228	0/0:24,0:24:66.19:0,66,2995	1/1:5,5:10:15.05:869,15,0	0/0:19,0:19:57.17:0,57,2873	0/0:16,0:16:39.12:0,39,1980	1/1:7,2:10:12.51:559,13,0	1/1:0,4:4:12.04:649,12,0	1/1:5,3:8:9.03:490,9,0	0/0:31,0:31:88.54:0,89,5431	0/0:24,0:24:69.24:0,69,3283	0/0:31,0:31:93.32:0,93,6248	0/0:39,0:39:99:0,111,5861	0/0:14,0:13:39.13:0,39,1788	0/0:8,0:8:21.07:0,21,1371	0/0:46,0:46:99:0,135,9502	1/1:8,5:13:12.04:699,12,0	1/1:3,2:5:6.02:350,6,0	1/1:13,2:15:6.02:240,6,0	0/0:24,0:24:69.22:0,69,4429	0/0:39,0:39:99:0,117,6677	0/0:14,0:14:39.13:0,39,2860	0/0:29,0:29:87.30:0,87,6422
chr10	45521949	.	GCA	G	5461.50	PASS	AB=1.000;AC=20;AF=0.357;AN=56;BaseQRankSum=9.441;DP=629;FS=5.975;HRun=0;HaplotypeScore=170.9270;InbreedingCoeff=0.8353;MQ=63.29;MQ0=6;MQRankSum=3.890;QD=19.23;ReadPosRankSum=5.385;VQSLOD=4.4953;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:26.28:0,26,230	0/0:7,0:7:8.73:0,9,67	0/0:35,0:25:38.57:0,39,643	0/0:35,0:22:38.17:0,38,412	1/1:4,16:20:42.13:522,42,0	1/1:5,15:20:33.10:411,33,0	1/1:6,27:34:50.99:612,51,0	0/1:19,0:19:21.17:21,0,121	0/0:7,0:7:16.84:0,17,88	1/1:7,18:25:57.08:653,57,0	1/1:2,14:16:25.02:301,25,0	0/0:18,0:18:20.89:0,21,378	0/0:19,0:19:38.78:0,39,406	0/0:13,0:13:22.99:0,23,226	1/1:4,26:30:60.19:748,60,0	1/1:2,22:24:45.12:544,45,0	0/0:24,0:24:66.19:0,66,1025	1/1:1,31:32:72.23:898,72,0	0/0:17,0:15:36.08:0,36,506	0/0:7,0:7:18.05:0,18,266	0/0:64,0:64:99:0,171,2494	0/0:8,0:8:11.29:0,11,55	0/0:3,0:3:8.11:0,8,66	0/0:20,0:20:26.77:0,27,274	1/1:2,27:29:60.19:747,60,0	0/1:35,0:35:4.82:5,0,496	0/0:18,0:18:54.15:0,54,804	0/0:31,1:32:37.83:0,38,1074
chr10	45522661	.	AGGT	A	16044.20	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=2.939;DP=692;FS=20.991;HRun=0;HaplotypeScore=109.6674;InbreedingCoeff=0.9487;MQ=65.54;MQ0=1;MQRankSum=-2.042;QD=26.05;ReadPosRankSum=2.977;VQSLOD=3.0608;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:18,34:52:93.27:1314,93,0	1/1:5,5:10:15.05:217,15,0	0/0:25,0:16:7.32:0,7,304	0/0:17,0:16:29.28:0,29,571	1/1:4,19:23:48.46:601,48,0	1/1:6,18:24:45.15:651,45,0	1/1:8,22:30:51.17:738,51,0	1/1:8,10:18:24.03:274,24,0	1/1:2,14:16:39.13:553,39,0	1/1:7,15:22:39.03:480,39,0	1/1:14,4:18:36.08:453,36,0	1/1:12,34:46:99:1452,102,0	1/1:3,17:20:45.10:626,45,0	1/1:6,13:19:39.13:564,39,0	1/1:9,23:32:63.16:887,63,0	1/1:7,30:37:90.30:1302,90,0	0/0:33,0:33:81.21:0,81,1534	1/1:4,22:26:54.18:781,54,0	1/1:8,8:16:27:326,27,0	1/1:10,13:23:30.06:410,30,0	1/1:8,23:31:48.16:694,48,0	1/1:10,21:31:50.96:707,51,0	1/1:9,8:17:17.51:259,18,0	1/1:7,26:33:72.24:1041,72,0	1/1:4,17:21:42.14:607,42,0	1/1:10,7:17:30.08:414,30,0	1/1:7,22:29:35.91:521,36,0	1/1:0,5:5:12.04:174,12,0
chr10	45524232	.	TA	T	7779.52	PASS	AB=0.923;AC=19;AF=0.339;AN=56;BaseQRankSum=13.991;DP=631;FS=4.097;HRun=2;HaplotypeScore=58.4334;InbreedingCoeff=0.9360;MQ=79.83;MQ0=0;MQRankSum=-0.389;QD=30.75;ReadPosRankSum=4.153;VQSLOD=4.4437;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:66.22:0,66,987	0/0:10,0:10:30.10:0,30,449	0/0:17,0:17:45.15:0,45,656	0/0:13,0:13:36.91:0,37,452	1/1:0,34:34:96.23:1223,96,0	1/1:1,27:28:66.21:856,66,0	1/1:0,9:9:24.08:311,24,0	0/0:41,0:41:99:0,117,1577	0/0:8,0:8:24.08:0,24,360	1/1:1,34:35:99:1256,99,0	1/1:1,27:28:81.18:1029,81,0	0/0:30,0:30:90.26:0,90,1272	0/0:22,0:22:66.22:0,66,970	0/0:21,0:21:63.20:0,63,906	1/1:1,29:30:72.23:934,72,0	1/1:0,33:33:90.29:1168,90,0	0/0:16,0:16:48.13:0,48,679	1/1:1,11:12:30.08:374,30,0	0/0:24,0:24:66.19:0,66,930	0/0:21,0:21:63.20:0,63,908	0/0:14,0:14:42.14:0,42,628	0/0:26,0:26:78.26:0,78,1168	0/0:24,0:24:72.22:0,72,1040	0/0:9,0:9:27.09:0,27,404	1/1:1,19:20:48.16:623,48,0	0/1:22,2:24:5.66:6,0,881	0/0:30,0:30:90.28:0,90,1305	0/0:29,0:29:87.26:0,87,1261
chr10	45524955	.	AAAAAAAAAC	A	2009.39	PASS	AB=0.981;AC=16;AF=0.286;AN=56;BaseQRankSum=-2.295;DP=573;FS=20.729;HRun=0;HaplotypeScore=140.2236;InbreedingCoeff=0.8082;MQ=46.90;MQ0=28;MQRankSum=-5.611;QD=12.64;ReadPosRankSum=0.367;VQSLOD=1.0561;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:41:81.17:0,81,1418	0/0:7,0:7:15:0,15,244	0/0:17,0:2:2.69:0,3,75	0/0:13,0:4:9.89:0,10,202	1/1:19,0:19:9.02:47,9,0	1/1:14,1:14:35.61:542,36,0	0/1:24,1:21:33.60:459,0,34	0/0:36,0:36:80.92:0,81,1327	0/0:19,0:17:44.97:0,45,804	1/1:3,17:18:23.25:212,23,0	0/1:22,0:19:1.04:110,0,1	0/0:20,0:20:29.62:0,30,525	0/0:22,0:22:26.94:0,27,511	0/0:23,0:22:26.04:0,26,455	1/1:15,0:15:13.35:172,13,0	1/1:19,2:21:33.65:384,34,0	0/0:40,0:38:92.94:0,93,2737	1/1:10,0:10:20.57:127,21,0	0/0:31,0:30:76.82:0,77,1666	0/0:17,0:17:39.02:0,39,909	0/0:14,0:14:20.87:0,21,459	0/0:22,0:21:47.91:0,48,782	0/0:18,0:18:28.44:0,28,506	0/0:18,0:16:20.40:0,20,394	1/1:12,0:12:16.85:151,17,0	0/0:19,0:17:39.34:0,39,705	0/0:13,0:12:30.05:0,30,642	0/0:23,0:12:24.08:0,24,623
chr10	45524956	.	AAAAAAAAC	A	2485.78	PASS	AB=0.889;AC=17;AF=0.304;AN=56;BaseQRankSum=-3.440;DP=576;FS=19.930;HRun=0;HaplotypeScore=130.0867;InbreedingCoeff=0.8673;MQ=48.28;MQ0=28;MQRankSum=-5.327;QD=15.93;ReadPosRankSum=-0.147;VQSLOD=1.4460;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:41:81:0,81,1117	0/0:7,0:7:14.96:0,15,186	0/0:19,0:3:2.10:0,2,59	0/0:14,0:4:9.91:0,10,184	1/1:16,2:18:12.83:83,13,0	1/1:12,3:14:35.81:600,36,0	0/1:21,3:21:21.90:527,0,22	0/0:36,0:36:78.21:0,78,1040	0/0:20,0:18:47.57:0,48,670	1/1:20,0:18:23.93:202,24,0	1/1:21,0:18:29.45:197,29,0	0/0:20,0:20:29.48:0,29,421	0/0:22,0:22:25.22:0,25,408	0/0:24,0:23:25.39:0,25,374	1/1:14,1:15:31.47:273,31,0	1/1:21,0:21:42.30:441,42,0	0/0:41,0:39:87.75:0,88,2360	1/1:10,0:10:23.68:168,24,0	0/0:32,0:31:77.15:0,77,1410	0/0:16,0:16:39.02:0,39,756	0/0:13,0:13:20.81:0,21,384	0/0:21,0:20:43.65:0,44,577	0/0:16,0:16:27.96:0,28,387	0/0:19,0:17:20.82:0,21,304	1/1:10,2:12:21.62:200,22,0	0/0:20,0:18:33.63:0,34,565	0/0:14,0:13:33.04:0,33,573	0/0:24,0:13:24.08:0,24,524
chr10	45524957	.	AAAAAAAC	A	2558.14	PASS	AB=0.923;AC=17;AF=0.304;AN=56;BaseQRankSum=-3.183;DP=586;FS=17.518;HRun=0;HaplotypeScore=124.5741;InbreedingCoeff=0.8684;MQ=48.57;MQ0=29;MQRankSum=-4.858;QD=16.40;ReadPosRankSum=-1.627;VQSLOD=1.7364;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:41:80.45:0,80,870	0/0:7,0:7:14.69:0,15,131	0/0:21,0:3:2.09:0,2,47	0/0:14,0:4:9.92:0,10,168	1/1:18,0:18:12.83:84,13,0	1/1:14,0:13:35.81:524,36,0	0/1:22,2:21:10.74:554,0,11	0/0:38,0:38:70.17:0,70,803	0/0:20,0:18:47.41:0,47,536	1/1:20,0:18:24.48:199,24,0	1/1:12,9:18:36.44:230,36,0	0/0:21,0:21:32.40:0,32,355	0/0:22,0:22:23.97:0,24,321	0/0:24,0:23:24.89:0,25,292	1/1:15,0:15:33.65:270,34,0	1/1:21,0:21:44.80:450,45,0	0/0:43,0:41:73.20:0,73,2066	1/1:10,0:10:23.76:170,24,0	0/0:32,0:31:77.91:0,78,1157	0/0:17,0:17:33.44:0,33,624	0/0:12,0:12:20.74:0,21,316	0/0:23,0:22:28.45:0,28,397	0/0:16,0:16:27.06:0,27,280	0/0:20,0:18:20.66:0,21,233	1/1:12,1:13:26.16:282,26,0	0/0:20,0:18:11.42:0,11,389	0/0:14,0:13:36.04:0,36,500	0/0:24,0:13:24.08:0,24,432
chr10	45524958	.	AAAAAAC	A	2542.62	PASS	AB=0.979;AC=18;AF=0.321;AN=56;BaseQRankSum=-2.779;DP=590;FS=18.094;HRun=0;HaplotypeScore=116.9103;InbreedingCoeff=0.7992;MQ=48.66;MQ0=29;MQRankSum=-5.373;QD=14.61;ReadPosRankSum=-3.299;VQSLOD=1.0847;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:42:76.24:0,76,622	0/0:7,0:7:11.12:0,11,73	0/0:21,0:3:2.09:0,2,34	0/0:14,0:4:9.92:0,10,148	1/1:2,15:17:13.24:84,13,0	1/1:14,0:13:35.91:483,36,0	0/1:22,1:20:4.07:520,0,4	0/0:38,0:38:65.58:0,66,578	0/0:21,0:19:23.98:0,24,378	1/1:19,0:17:24.49:194,24,0	1/1:21,0:18:40.88:251,41,0	0/0:22,0:22:25.13:0,25,261	0/0:23,0:23:18.72:0,19,237	0/0:24,0:23:23.76:0,24,218	1/1:14,0:14:35.64:289,36,0	1/1:22,0:22:47.70:449,48,0	0/0:44,0:42:59.62:0,60,1739	1/1:10,0:10:23.78:171,24,0	0/0:32,0:31:62.56:0,63,914	0/0:16,0:16:33.20:0,33,487	0/0:13,0:13:23.63:0,24,263	0/0:24,0:23:7.40:0,7,227	0/0:15,0:15:23.95:0,24,178	0/0:20,0:18:18.50:0,18,162	1/1:14,0:14:29.40:283,29,0	0/1:20,0:18:23.14:23,0,251	0/0:15,0:14:37.60:0,38,389	0/0:24,0:13:24.08:0,24,337
chr10	45525501	.	A	AAC	6375.92	PASS	AB=0.573;AC=14;AF=0.250;AN=56;BaseQRankSum=-13.491;DP=705;FS=17.933;HRun=0;HaplotypeScore=88.6333;InbreedingCoeff=0.8409;MQ=70.97;MQ0=2;MQRankSum=-1.786;QD=29.79;ReadPosRankSum=4.825;VQSLOD=5.3127;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:7,24:30:2.73:767,0,3	0/0:11,0:11:27.08:0,27,335	0/0:29,0:24:48.04:0,48,526	0/0:37,0:35:58.13:0,58,665	0/0:26,0:26:66.21:0,66,818	0/0:23,0:23:48.14:0,48,582	0/0:17,0:18:38.95:0,39,460	0/0:34,0:34:69.21:0,69,852	1/1:3,17:21:48.16:787,48,0	0/0:22,0:22:51.07:0,51,590	0/0:11,0:11:30.04:0,30,342	1/1:8,31:39:75.26:1229,75,0	1/1:5,19:25:48.16:758,48,0	1/1:5,25:31:69.24:1124,69,0	0/0:35,0:34:90.26:0,90,1094	0/0:27,1:28:29.05:0,29,868	0/0:35,0:35:96.28:0,96,1165	0/0:24,0:24:63.16:0,63,764	0/0:25,0:25:59.73:0,60,681	0/0:18,0:18:48.14:0,48,582	0/0:27,0:29:71.84:0,72,800	0/1:9,23:32:17.18:777,0,17	1/1:2,12:14:14.87:246,15,0	1/1:5,15:20:42.14:688,42,0	0/0:24,0:24:57.13:0,57,679	0/0:24,0:24:63.20:0,63,781	0/0:33,0:33:62.98:0,63,756	0/0:5,0:5:15.05:0,15,186
chr10	45527594	.	CAGGTG	C	394.26	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.724;DP=726;FS=1.309;HRun=0;HaplotypeScore=138.2374;InbreedingCoeff=0.9758;MQ=68.65;MQ0=0;MQRankSum=-3.554;QD=30.33;ReadPosRankSum=-0.085;VQSLOD=3.6530;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:93.32:0,93,3005	1/1:6,7:13:24.08:488,24,0	0/0:7,0:7:18.04:0,18,441	0/0:9,0:9:16.02:0,16,186	0/0:32,0:32:90.84:0,91,2929	0/0:23,0:23:69.24:0,69,2183	0/0:37,0:37:99:0,111,3418	0/0:23,0:23:60.20:0,60,1780	0/0:25,0:25:75.26:0,75,2402	0/0:34,0:34:99:0,102,3201	0/0:19,0:19:57.20:0,57,1815	0/0:32,0:32:93.32:0,93,2921	0/0:25,0:25:72.25:0,72,2298	0/0:21,0:21:63.22:0,63,2008	0/0:36,0:36:99:0,108,3465	0/0:21,0:21:63.21:0,63,1965	0/0:37,0:37:99:0,111,3386	0/0:31,0:31:93.28:0,93,2929	0/0:20,0:20:60.21:0,60,1876	0/0:34,0:34:99:0,102,3186	0/0:28,0:28:84.29:0,84,2714	0/0:18,0:18:54.19:0,54,1674	0/0:37,0:37:99:0,111,3563	0/0:32,0:32:90.31:0,90,2908	0/0:18,0:18:54.19:0,54,1722	0/0:43,0:43:99:0,123,3876	0/0:30,0:30:87.28:0,87,2681	0/0:10,0:10:24.08:0,24,727
chr10	45527603	.	TTTC	T	168.37	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=4.853;DP=720;FS=3.158;HRun=0;HaplotypeScore=108.7192;InbreedingCoeff=0.7246;MQ=70.08;MQ0=0;MQRankSum=-3.592;QD=12.03;ReadPosRankSum=0.008;VQSLOD=3.0931;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:93.28:0,93,2137	1/1:0,7:7:21.05:260,21,0	0/0:11,0:11:21.07:0,21,427	0/1:6,0:7:3.31:3,0,174	0/0:29,0:29:87.30:0,87,2055	0/0:23,0:23:69.24:0,69,1630	0/0:36,0:36:99:0,108,2463	0/0:25,0:25:69.24:0,69,1619	0/0:26,0:26:78.27:0,78,1830	0/0:35,0:35:99:0,105,2376	0/0:19,0:19:54.18:0,54,1239	0/0:33,0:33:96.29:0,96,2108	0/0:25,0:25:75.24:0,75,1705	0/0:20,0:20:60.21:0,60,1418	0/0:36,0:36:99:0,108,2535	0/0:21,0:21:60.21:0,60,1419	0/0:35,0:35:99:0,102,2295	0/0:33,0:33:99:0,99,2287	0/0:22,0:22:66.22:0,66,1517	0/0:35,0:35:99:0,99,2307	0/0:29,0:29:87.30:0,87,2040	0/0:20,0:20:60.21:0,60,1406	0/0:35,0:35:99:0,105,2462	0/0:32,0:32:93.32:0,93,2181	0/0:16,0:16:48.16:0,48,1113	0/0:40,1:41:99:0,120,2821	0/0:30,0:30:90.28:0,90,1987	0/0:7,0:7:21.07:0,21,496
chr10	45527608	.	GCCT	G	164.88	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.542;DP=721;FS=5.767;HRun=0;HaplotypeScore=108.8507;InbreedingCoeff=0.9801;MQ=70.72;MQ0=0;MQRankSum=-4.507;QD=23.55;ReadPosRankSum=0.466;VQSLOD=3.3223;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:90.31:0,90,2009	1/1:0,7:7:21.06:257,21,0	0/0:12,0:12:36.12:0,36,792	0/0:6,0:6:16.30:0,16,315	0/0:29,0:29:84.27:0,84,1845	0/0:23,0:23:66.23:0,66,1495	0/0:34,0:34:99:0,99,2225	0/0:25,0:25:72.25:0,72,1588	0/0:25,0:25:75.26:0,75,1700	0/0:35,0:35:99:0,102,2225	0/0:21,0:21:63.22:0,63,1351	0/0:34,0:34:93.32:0,93,2072	0/0:24,0:24:72.25:0,72,1630	0/0:22,0:22:63.22:0,63,1360	0/0:36,0:36:99:0,108,2446	0/0:21,0:21:63.22:0,63,1427	0/0:33,0:33:96.33:0,96,2174	0/0:33,0:33:96.33:0,96,2151	0/0:22,0:22:66.18:0,66,1448	0/0:34,0:34:99:0,102,2311	0/0:31,0:31:90.28:0,90,1977	0/0:21,0:21:63.22:0,63,1427	0/0:37,0:37:99:0,105,2336	0/0:33,0:33:93.32:0,93,2106	0/0:15,0:15:45.15:0,45,1020	0/0:42,0:42:99:0,120,2702	0/0:28,0:28:81.28:0,81,1826	0/0:7,0:7:21.07:0,21,476
chr10	45528132	.	TA	T	603.31	PASS	AB=0.849;AC=15;AF=0.268;AN=56;BaseQRankSum=3.491;DP=446;FS=0.000;HRun=12;HaplotypeScore=85.9603;InbreedingCoeff=0.2047;MQ=86.71;MQ0=4;MQRankSum=-1.795;QD=3.97;ReadPosRankSum=-0.149;VQSLOD=1.0034;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:9,1:10:16.52:17,0,180	0/0:5,0:6:11.86:0,12,105	0/1:48,2:26:28.91:29,0,265	0/0:53,2:33:2.23:0,2,219	0/0:28,0:28:50.48:0,50,670	0/1:10,2:12:19.41:19,0,186	0/0:14,1:15:12.06:0,12,276	0/0:31,3:34:2.83:0,3,431	0/0:9,0:9:15.03:0,15,152	0/0:21,1:22:15.29:0,15,402	0/0:17,0:17:9.81:0,10,253	0/0:11,1:12:0.77:0,1,178	0/0:6,0:6:11.86:0,12,105	0/0:9,1:10:0.83:0,1,190	0/1:22,2:24:35.26:35,0,363	0/1:8,1:9:23.41:23,0,121	0/0:13,0:13:28.87:0,29,279	0/0:6,0:6:11.99:0,12,113	1/1:3,5:9:16.96:120,17,0	0/1:2,8:10:3.59:154,0,4	1/1:1,3:4:8.97:70,9,0	0/1:4,1:5:9.99:10,0,62	0/0:10,1:11:3.81:0,4,215	0/0:3,0:3:5.38:0,5,39	0/0:19,0:19:48.51:0,49,468	0/0:23,1:25:33.04:0,33,545	1/1:4,11:16:11.11:242,11,0	1/1:0,2:3:5.98:46,6,0
chr10	45528160	.	TAAACACAC	T	1971.32	PASS	AB=1.000;AC=25;AF=0.463;AN=54;BaseQRankSum=11.085;DP=393;FS=1.725;HRun=0;HaplotypeScore=153.8879;InbreedingCoeff=0.2966;MQ=87.70;MQ0=3;MQRankSum=-8.931;QD=12.97;ReadPosRankSum=2.221;VQSLOD=2.3601;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:4:3.01:71,3,0	1/1:3,1:4:9.03:201,9,0	0/0:35,0:28:36.81:0,37,1701	0/0:52,0:38:41.03:0,41,1797	0/0:25,0:25:3.07:0,3,931	0/1:14,0:14:87.89:88,0,241	0/1:14,0:14:85.76:86,0,243	0/0:37,0:37:72.16:0,72,1438	1/1:5,1:6:9.03:217,9,0	0/1:17,0:17:1.37:1,0,512	0/1:12,0:12:29.75:30,0,307	1/1:5,6:11:21.07:520,21,0	1/1:3,1:4:3.01:81,3,0	1/1:5,2:7:9.03:215,9,0	0/1:22,0:22:99:189,0,160	1/1:10,0:10:18.12:110,18,0	0/0:16,0:16:42.14:0,42,1721	0/1:4,0:4:31.10:31,0,178	0/0:10,0:10:27.07:0,27,612	0/0:9,0:9:4.80:0,5,240	0/0:4,0:4:6.02:0,6,129	1/1:4,0:4:3.01:55,3,0	./.	1/1:2,2:4:6.02:162,6,0	0/1:15,0:15:91.80:92,0,287	0/0:21,0:21:7.86:0,8,557	0/0:19,0:19:14.30:0,14,428	0/0:3,0:3:3.48:0,3,78
chr10	45528165	.	ACACAAACACACACTCT	A	2131.20	PASS	AB=1.000;AC=17;AF=0.315;AN=54;BaseQRankSum=2.339;DP=358;FS=1.759;HRun=0;HaplotypeScore=201.5941;InbreedingCoeff=0.7322;MQ=84.13;MQ0=1;MQRankSum=-3.637;QD=49.56;ReadPosRankSum=0.426;VQSLOD=3.0067;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,0:2:3.01:71,3,0	1/1:1,3:4:9.03:418,9,0	0/0:32,0:25:33.09:0,33,2611	0/0:46,0:32:36.19:0,36,2558	0/0:24,0:24:63.13:0,63,1348	0/0:13,0:13:33.99:0,34,569	0/0:12,0:12:30.99:0,31,801	0/0:38,0:38:99:0,100,2952	1/1:2,4:6:9.03:400,9,0	0/0:14,0:14:39.13:0,39,898	0/0:11,0:11:33.11:0,33,555	1/1:7,4:11:21.07:743,21,0	1/1:2,0:2:3.01:111,3,0	1/1:4,0:4:9.03:225,9,0	0/0:21,0:21:60.21:0,60,1187	0/0:9,0:9:26.88:0,27,440	0/0:16,0:16:45.10:0,45,3224	0/0:4,0:4:12.04:0,12,285	0/0:10,0:10:27.09:0,27,934	0/1:9,0:9:88.68:89,0,361	0/0:4,0:4:6.02:0,6,177	1/1:3,0:3:3.01:55,3,0	./.	1/1:2,0:2:6.02:195,6,0	0/0:13,0:13:39.05:0,39,821	0/0:19,0:19:57.19:0,57,1455	0/0:19,0:19:57.18:0,57,1417	0/0:2,0:2:6.02:0,6,193
chr10	45528173	.	ACACACTCT	A	8019.43	PASS	AC=42;AF=0.875;AN=48;BaseQRankSum=7.013;DP=319;FS=6.535;HRun=0;HaplotypeScore=117.1003;InbreedingCoeff=0.6806;MQ=83.72;MQ0=1;MQRankSum=-7.786;QD=36.29;ReadPosRankSum=3.565;VQSLOD=4.1936;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	1/1:4,0:4:9.03:176,9,0	0/0:33,0:23:43.34:0,43,1071	0/0:36,0:27:32.88:0,33,960	1/1:21,1:22:9.03:217,9,0	1/1:10,0:10:21.07:514,21,0	1/1:11,0:11:21.07:498,21,0	1/1:35,0:35:63.15:1023,63,0	1/1:5,0:5:9.03:158,9,0	1/1:9,0:9:15.05:377,15,0	1/1:9,0:9:11.87:219,12,0	1/1:10,0:10:21.04:251,21,0	1/1:2,0:2:3.01:33,3,0	1/1:3,0:3:6.01:76,6,0	1/1:5,15:20:51.17:1248,51,0	1/1:8,1:9:27.09:652,27,0	0/0:20,0:20:54.14:0,54,1875	1/1:3,0:3:3.01:76,3,0	1/1:10,0:10:6.02:110,6,0	1/1:6,0:6:9.03:184,9,0	./.	./.	./.	1/1:2,0:2:6.01:63,6,0	1/1:13,0:13:27.09:657,27,0	1/1:18,0:18:36.11:686,36,0	1/1:18,0:18:44.97:741,45,0	1/1:2,0:2:3.01:61,3,0
chr10	45528186	.	CTCTCACACT	C	7126.52	PASS	AB=1.000;AC=36;AF=0.720;AN=50;BaseQRankSum=8.272;DP=294;FS=0.000;HRun=0;HaplotypeScore=123.1844;InbreedingCoeff=0.1939;MQ=70.26;MQ0=3;MQRankSum=-7.782;QD=34.43;ReadPosRankSum=4.944;VQSLOD=4.4376;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:5,0:5:0.43:0,0,1	1/1:4,0:4:9.03:106,9,0	0/0:36,0:21:55.40:0,55,1470	0/0:28,0:19:31.43:0,31,1363	0/1:16,0:16:29.93:147,0,30	1/1:9,0:9:21.54:450,22,0	0/1:11,0:11:30.19:353,0,30	1/1:19,10:29:86.80:1648,87,0	1/1:7,0:7:8.37:115,8,0	0/1:8,0:8:21:235,0,21	1/1:12,0:12:4.39:172,4,0	1/1:10,0:10:21.06:296,21,0	0/1:2,0:2:28.27:43,0,28	0/1:3,0:3:25.83:106,0,26	1/1:21,0:21:33.86:777,34,0	1/1:13,0:13:12.05:466,12,0	0/0:21,0:21:59.19:0,59,2335	0/1:3,0:3:12.44:58,0,12	0/1:5,0:5:41.55:42,0,56	1/1:5,0:5:9.01:95,9,0	./.	./.	./.	1/1:3,0:3:6.02:100,6,0	1/1:9,0:9:27.09:530,27,0	1/1:6,8:14:42.07:952,42,0	1/1:17,0:17:34.31:405,34,0	1/1:1,0:1:3.01:31,3,0
chr10	45528188	.	CTCACACT	C	8744.49	PASS	AB=1.000;AC=43;AF=0.860;AN=50;BaseQRankSum=6.801;DP=282;FS=3.468;HRun=0;HaplotypeScore=103.2685;InbreedingCoeff=0.6580;MQ=68.96;MQ0=3;MQRankSum=-7.275;QD=44.16;ReadPosRankSum=2.873;VQSLOD=4.4267;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:5,0:5:0.29:0,0,0	1/1:3,0:4:9.03:176,9,0	0/0:35,0:20:52.24:0,52,1191	0/0:27,0:18:37.31:0,37,1041	1/1:3,10:13:9.03:216,9,0	1/1:4,4:8:21.54:514,22,0	1/1:5,4:9:21.54:499,22,0	1/1:31,0:31:80.21:1251,80,0	1/1:6,0:7:8.35:175,8,0	1/1:4,3:7:13.69:375,14,0	1/1:4,8:12:10.75:234,11,0	1/1:5,0:10:21.05:301,21,0	1/1:2,0:3:2.34:46,2,0	1/1:2,0:3:6.01:77,6,0	1/1:21,0:21:57.39:1253,57,0	1/1:8,6:14:27.39:666,27,0	0/0:20,0:20:53.16:0,53,1804	1/1:2,0:2:3.48:74,3,0	1/1:2,0:2:6.02:131,6,0	1/1:0,4:4:9.03:184,9,0	./.	./.	./.	1/1:1,0:3:6.02:72,6,0	1/1:4,5:9:27.09:656,27,0	1/1:13,0:13:38.99:824,39,0	1/1:7,3:17:44.04:940,44,0	1/1:0,1:1:3.01:80,3,0
chr10	45528194	.	CT	C	1843.76	PASS	AB=1.000;AC=40;AF=0.800;AN=50;BaseQRankSum=8.301;DP=276;FS=3.506;HRun=1;HaplotypeScore=98.8512;InbreedingCoeff=0.3248;MQ=65.13;MQ0=3;MQRankSum=-7.085;QD=9.50;ReadPosRankSum=3.836;VQSLOD=1.6107;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,0:5:0.78:2,1,0	1/1:4,0:4:3.69:10,4,0	0/0:34,0:18:33.70:0,34,333	0/0:24,0:15:6.69:0,7,223	1/1:13,0:13:7.87:34,8,0	1/1:9,0:9:20.84:121,21,0	1/1:8,0:8:18.11:114,18,0	1/1:21,7:28:77.93:511,78,0	1/1:7,0:7:6.37:27,6,0	0/1:7,0:7:26.31:52,0,26	1/1:12,0:12:7.96:40,8,0	1/1:10,0:10:12.76:79,13,0	0/1:3,0:3:12.16:12,0,29	0/1:3,0:3:25.94:29,0,26	0/1:23,0:23:0.18:118,0,0	1/1:14,0:14:7.03:123,7,0	0/0:21,1:22:40.23:0,40,463	1/1:3,0:3:4.20:16,4,0	1/1:1,0:1:2.98:21,3,0	1/1:4,0:4:1.86:16,2,0	./.	./.	./.	1/1:3,0:3:5.90:37,6,0	1/1:8,0:8:23.37:141,23,0	1/1:9,3:12:34.47:194,34,0	1/1:16,0:16:42.05:274,42,0	1/1:1,0:1:2.92:17,3,0
chr10	45528208	.	C	CTGT	6359.94	PASS	AB=0.957;AC=47;AF=0.904;AN=52;BaseQRankSum=1.920;DP=302;FS=0.873;HRun=0;HaplotypeScore=93.0248;InbreedingCoeff=0.5166;MQ=80.79;MQ0=2;MQRankSum=-4.272;QD=25.44;ReadPosRankSum=-0.347;VQSLOD=4.8279;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	1/1:5,0:5:9.03:146,9,0	0/0:25,0:13:21.98:0,22,394	0/1:21,0:17:27.54:28,0,178	1/1:10,1:11:24.06:449,24,0	1/1:3,9:12:9.03:158,9,0	1/1:1,7:10:0.47:1,0,0	1/1:4,0:34:82.20:612,82,0	1/1:5,0:5:12.04:194,12,0	1/1:3,10:14:35.79:698,36,0	1/1:12,2:14:30.08:601,30,0	1/1:8,0:9:26.98:312,27,0	1/1:0,0:6:3.01:35,3,0	1/1:4,0:4:11.87:123,12,0	1/1:1,22:24:54.17:1067,54,0	1/1:6,7:13:18:236,18,0	0/0:18,0:18:18.06:0,18,264	1/1:1,4:5:6.02:125,6,0	1/1:0,0:5:14.97:155,15,0	1/1:7,0:8:15.04:219,15,0	1/1:6,0:6:14.83:126,15,0	./.	1/1:2,0:2:6.02:97,6,0	1/1:2,0:2:2.94:18,3,0	1/1:1,8:10:9.03:158,9,0	1/1:7,0:18:48.33:391,48,0	1/1:8,0:9:24.03:312,24,0	1/1:2,0:2:6.02:97,6,0
chr10	45530126	.	A	AT	681.28	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=-3.923;DP=549;FS=0.552;HRun=0;HaplotypeScore=79.6232;InbreedingCoeff=0.4371;MQ=68.84;MQ0=9;MQRankSum=3.569;QD=11.17;ReadPosRankSum=-0.222;VQSLOD=3.9636;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:30:72.81:0,73,473	0/0:11,0:10:24.39:0,24,159	0/0:40,0:13:15.72:0,16,163	0/0:32,0:16:1.87:0,2,94	0/0:31,0:30:66.38:0,66,434	0/0:13,0:13:32.94:0,33,200	0/0:18,0:18:17.31:0,17,136	0/1:39,0:39:9.48:393,0,9	0/0:8,0:8:22.42:0,22,153	0/0:21,0:21:57.11:0,57,407	0/0:20,0:20:55.78:0,56,369	0/0:12,0:12:32.66:0,33,246	0/0:9,0:9:23.76:0,24,180	0/0:12,0:12:33.72:0,34,270	0/0:17,0:16:44.08:0,44,306	0/0:14,0:14:35.31:0,35,229	0/0:28,0:28:71.86:0,72,566	0/0:14,0:14:34.71:0,35,214	0/0:11,0:10:29.67:0,30,227	0/0:34,0:34:54.09:0,54,381	0/0:7,0:7:10.98:0,11,72	0/0:15,0:15:41.66:0,42,341	0/0:14,0:14:30.57:0,31,221	0/0:20,0:20:55.65:0,56,426	0/0:19,0:19:47.86:0,48,293	1/1:5,17:22:3.21:380,3,0	0/0:24,0:24:63.56:0,64,409	0/0:13,0:13:33.60:0,34,186
chr10	45531217	.	G	GTAGCTAGC	59377.94	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-6.170;DP=748;FS=8.728;HRun=0;HaplotypeScore=172.3167;InbreedingCoeff=0.9933;MQ=63.76;MQ0=0;MQRankSum=-12.309;QD=86.81;ReadPosRankSum=2.784;VQSLOD=5.0236;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,23:33:75.26:3292,75,0	1/1:4,7:12:27.09:1160,27,0	0/0:19,0:19:54.17:0,54,1330	0/0:13,0:13:36.03:0,36,691	1/1:9,16:27:42.14:1769,42,0	1/1:3,19:28:60.21:2673,60,0	1/1:11,20:32:84.29:3538,84,0	1/1:25,15:46:99:4262,126,0	1/1:7,28:39:90.31:3951,90,0	1/1:6,13:22:66.22:2370,66,0	1/1:9,8:19:33.11:1383,33,0	1/1:20,24:47:99:4195,99,0	1/1:15,23:41:87.26:3739,87,0	1/1:10,10:21:30.06:1219,30,0	1/1:7,30:41:87.30:3868,87,0	1/1:12,28:46:96.33:4232,96,0	0/0:32,0:32:93.32:0,93,2535	1/1:6,7:16:36.12:1604,36,0	1/1:8,6:16:42.14:1434,42,0	1/1:11,11:25:51.13:2094,51,0	1/1:9,10:27:24.08:1024,24,0	1/1:6,9:19:30.10:1300,30,0	1/1:14,3:19:18.06:746,18,0	1/1:7,15:25:36.24:1486,36,0	1/1:12,6:18:21.07:891,21,0	1/1:13,10:26:69.24:2761,69,0	1/1:5,21:28:78.02:3418,78,0	1/1:3,5:11:24.08:971,24,0
chr10	45533644	.	CAA	C	1009.52	PASS	AB=0.618;AC=16;AF=0.286;AN=56;BaseQRankSum=0.498;DP=470;FS=18.836;HRun=16;HaplotypeScore=78.3257;InbreedingCoeff=0.7658;MQ=50.62;MQ0=13;MQRankSum=0.719;QD=8.86;ReadPosRankSum=1.827;VQSLOD=0.3108;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:12,16:29:39.82:322,40,0	0/1:3,1:7:6.43:68,0,6	0/0:5,0:2:6:0,6,51	0/0:10,0:6:0.64:0,1,43	0/0:28,0:30:53.86:0,54,569	0/0:19,0:18:29.46:0,29,304	0/0:15,0:13:24.08:0,24,314	0/0:33,1:40:51.78:0,52,776	1/1:5,7:13:11.81:140,12,0	0/0:13,0:13:29.45:0,29,336	0/0:8,0:9:20.98:0,21,212	1/1:8,5:15:17.29:118,17,0	1/1:6,3:9:8.90:75,9,0	1/1:4,6:10:17.94:147,18,0	0/0:15,0:17:35.42:0,35,407	0/0:15,0:21:40.65:0,41,394	0/0:30,0:27:45.96:0,46,546	0/0:18,0:17:39.53:0,40,470	0/0:17,0:18:25.32:0,25,314	0/0:11,0:13:29.41:0,29,320	0/0:15,0:17:28.81:0,29,306	1/1:4,6:12:22.53:171,23,0	0/1:3,5:9:8.89:85,0,9	1/1:5,4:8:8.98:75,9,0	0/0:8,0:11:15.04:0,15,175	0/0:21,0:24:47.33:0,47,522	0/0:18,0:18:39.13:0,39,502	0/0:21,0:20:35.86:0,36,415
chr10	45533876	.	AAT	A	1434.90	PASS	AC=14;AF=0.259;AN=54;BaseQRankSum=8.731;DP=311;FS=1.349;HRun=0;HaplotypeScore=35.7364;InbreedingCoeff=0.8407;MQ=63.03;MQ0=0;MQRankSum=1.651;QD=23.52;ReadPosRankSum=3.215;VQSLOD=3.9565;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,20:22:42.14:552,42,0	0/0:3,0:3:9.03:0,9,150	0/0:6,0:6:8.98:0,9,97	0/0:4,0:4:3.01:0,3,47	0/0:20,0:20:45.61:0,46,724	0/0:24,0:24:63.22:0,63,1074	0/0:3,0:3:3.01:0,3,51	0/0:37,0:37:99:0,108,1818	1/1:0,5:5:12.04:158,12,0	0/0:14,0:14:36.12:0,36,617	0/0:13,0:13:30.10:0,30,514	1/1:0,9:9:21.07:276,21,0	1/1:0,7:7:21.07:276,21,0	1/1:4,4:8:12.04:158,12,0	0/0:8,0:8:21.06:0,21,334	0/0:9,0:9:18.06:0,18,293	0/0:11,0:11:33.11:0,33,558	0/0:15,0:15:42.14:0,42,712	0/0:16,0:16:42.14:0,42,707	0/0:9,0:9:18.05:0,18,282	0/0:2,0:2:3.01:0,3,51	./.	1/1:0,4:4:6.02:79,6,0	1/1:2,4:6:9.03:118,9,0	0/0:8,0:8:24.06:0,24,379	0/0:17,0:17:36.12:0,36,616	0/0:14,0:14:36.12:0,36,603	0/0:15,0:15:39.13:0,39,668
chr10	45534239	.	GCA	G	638.02	PASS	AB=0.875;AC=33;AF=0.825;AN=40;BaseQRankSum=2.607;DP=323;FS=0.000;HRun=0;HaplotypeScore=54.1432;InbreedingCoeff=0.3193;MQ=66.73;MQ0=18;MQRankSum=0.366;QD=3.69;ReadPosRankSum=3.111;VQSLOD=1.5078;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	1/1:7,2:8:3:32,3,0	./.	1/1:15,2:16:5.91:63,6,0	./.	0/0:3,0:3:0.47:0,0,1	./.	1/1:3,2:5:3.01:32,3,0	1/1:4,1:4:3.01:32,3,0	1/1:7,0:7:5.83:38,6,0	1/1:6,1:7:3.48:32,3,0	1/1:5,2:7:6.02:63,6,0	1/1:4,0:6:5.68:28,6,0	1/1:16,6:23:17.51:160,18,0	1/1:14,2:16:6.01:63,6,0	./.	1/1:5,0:9:2.84:14,3,0	0/1:12,0:13:0.03:0,0,0	0/0:2,0:2:3.01:0,3,43	1/1:2,0:2:2.99:24,3,0	1/1:17,1:16:3.01:32,3,0	1/1:6,1:6:3:32,3,0	0/0:14,0:14:10.22:0,10,91	1/1:6,0:9:8.52:42,9,0	1/1:8,0:12:11.36:56,11,0
chr10	45534323	.	A	AT	3677.87	PASS	AB=0.977;AC=37;AF=0.661;AN=56;BaseQRankSum=7.131;DP=375;FS=4.900;HRun=8;HaplotypeScore=94.7017;InbreedingCoeff=0.8305;MQ=89.62;MQ0=4;MQRankSum=-6.663;QD=16.72;ReadPosRankSum=1.834;VQSLOD=3.6396;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,11:12:36.07:391,36,0	1/1:0,7:7:21.06:240,21,0	0/1:41,0:29:33.04:33,0,76	0/0:41,0:26:18.06:0,18,168	1/1:21,0:21:59.14:387,59,0	1/1:23,0:22:62.19:415,62,0	1/1:8,0:8:20.83:155,21,0	0/0:22,0:22:30.66:0,31,464	1/1:0,2:2:6.02:69,6,0	1/1:18,0:18:32.63:221,33,0	1/1:16,0:16:38.47:256,38,0	1/1:4,6:10:21.05:231,21,0	1/1:3,6:9:27.04:279,27,0	1/1:0,3:3:9.03:104,9,0	1/1:8,0:8:20.63:130,21,0	1/1:4,0:4:11.83:78,12,0	0/0:20,0:20:48.02:0,48,439	1/1:15,0:15:35.65:252,36,0	0/0:17,0:17:42:0,42,377	0/0:13,0:13:36.01:0,36,325	0/0:5,0:4:9:0,9,82	1/1:1,1:2:6.01:59,6,0	1/1:0,2:2:6.02:69,6,0	1/1:1,2:3:9.01:92,9,0	1/1:13,0:13:32.58:216,33,0	0/0:19,0:19:48.02:0,48,439	0/0:13,0:13:38.94:0,39,338	0/0:4,0:4:8.89:0,9,63
chr10	45534331	.	T	TTA	6217.09	PASS	AB=0.995;AC=33;AF=0.589;AN=56;BaseQRankSum=5.904;DP=389;FS=13.485;HRun=0;HaplotypeScore=94.2904;InbreedingCoeff=0.5858;MQ=92.04;MQ0=4;MQRankSum=-7.641;QD=28.00;ReadPosRankSum=2.024;VQSLOD=5.8338;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:16,0:15:22.43:60,0,22	1/1:8,0:8:2.86:18,3,0	0/1:42,0:29:2.74:3,0,176	0/0:47,0:31:8.21:0,8,210	1/1:2,19:21:63.20:1126,63,0	1/1:3,20:22:69.20:1199,69,0	1/1:3,4:7:21.06:348,21,0	0/0:23,0:23:42.80:0,43,843	1/1:2,0:2:3.11:8,3,0	1/1:8,10:18:54.08:745,54,0	1/1:3,11:14:41.94:676,42,0	0/1:9,0:9:8.32:8,0,24	0/1:10,0:10:4.02:75,0,4	0/1:4,0:4:4.71:5,0,18	1/1:0,7:7:21.07:350,21,0	1/1:0,4:4:12.04:225,12,0	0/0:22,0:22:63.04:0,63,809	1/1:6,9:15:42.01:627,42,0	0/0:18,0:18:51.09:0,51,647	0/0:14,0:14:39.11:0,39,541	0/0:5,0:4:9.03:0,9,131	1/1:2,0:2:4.55:29,5,0	1/1:3,0:3:3.11:8,3,0	1/1:3,0:3:6.36:33,6,0	1/1:2,11:13:39.12:674,39,0	0/0:18,0:18:54.16:0,54,751	0/0:15,0:15:45.02:0,45,551	0/0:5,0:5:11.89:0,12,103
chr10	45534347	.	TA	T	4878.43	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=11.478;DP=391;FS=2.023;HRun=7;HaplotypeScore=84.0134;InbreedingCoeff=0.9053;MQ=86.48;MQ0=4;MQRankSum=-7.979;QD=25.68;ReadPosRankSum=0.673;VQSLOD=5.4019;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,16:16:36.07:367,36,0	1/1:3,6:9:18:172,18,0	0/0:32,0:23:0.14:0,0,73	0/0:36,1:26:22.96:0,23,190	1/1:2,23:25:54.07:540,54,0	1/1:2,23:25:66.15:672,66,0	1/1:1,6:7:21.05:214,21,0	0/0:26,0:26:72.21:0,72,879	1/1:0,3:3:9.02:92,9,0	1/1:2,20:22:60.10:593,60,0	1/1:2,12:14:33.07:336,33,0	1/1:1,7:8:21.05:214,21,0	1/1:0,8:8:18.04:183,18,0	1/1:0,5:5:12.03:122,12,0	1/1:0,8:8:24.05:244,24,0	1/1:0,6:6:18.04:183,18,0	0/0:24,0:24:63.18:0,63,767	1/1:2,12:14:36.08:366,36,0	0/0:17,0:17:51.16:0,51,642	0/0:13,0:13:36.12:0,36,453	0/0:6,0:5:12.03:0,12,138	1/1:0,2:2:6.01:61,6,0	1/1:0,3:3:9.02:92,9,0	1/1:1,3:4:9.02:92,9,0	1/1:0,11:11:33.07:336,33,0	0/0:19,0:19:51.16:0,51,642	0/0:16,0:16:45.14:0,45,566	0/0:9,0:9:24.08:0,24,302
chr10	45535216	.	GAC	G	7311.67	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=3.525;DP=838;FS=0.924;HRun=0;HaplotypeScore=214.9629;InbreedingCoeff=0.9306;MQ=57.02;MQ0=15;MQRankSum=3.124;QD=13.37;ReadPosRankSum=4.609;VQSLOD=4.7894;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:40:28.37:141,28,0	1/1:2,0:10:17:84,17,0	0/0:40,0:12:5.96:0,6,67	0/0:41,0:16:11.48:0,11,108	1/1:9,15:29:23.59:419,24,0	1/1:4,14:19:35.53:395,36,0	1/1:10,14:28:50.48:506,50,0	0/0:26,0:31:47.98:0,48,536	1/1:8,0:29:42.61:210,43,0	1/1:10,18:31:62.50:634,62,0	1/1:8,12:22:38.95:430,39,0	1/1:9,0:36:68.18:336,68,0	1/1:10,0:23:36.93:182,37,0	1/1:8,0:34:59.66:294,60,0	1/1:11,28:40:80.90:895,81,0	1/1:11,22:34:66.03:742,66,0	0/0:14,4:19:7.46:0,7,520	1/1:6,15:21:6.51:426,7,0	0/0:17,0:20:38.84:0,39,321	0/0:19,0:27:19.91:0,20,144	0/0:56,0:70:13.93:0,14,121	1/1:7,0:30:45.42:224,45,0	1/1:3,0:21:39.73:195,40,0	1/1:10,0:24:11.12:56,11,0	1/1:9,23:36:9.99:515,10,0	1/1:13,21:37:58.92:629,59,0	0/0:12,0:28:56.78:0,57,503	0/0:7,0:12:24.03:0,24,246
chr10	45535773	.	GA	G	7167.63	PASS	AB=0.973;AC=38;AF=0.679;AN=56;BaseQRankSum=11.176;DP=584;FS=0.765;HRun=10;HaplotypeScore=72.7995;InbreedingCoeff=0.8010;MQ=78.37;MQ0=1;MQRankSum=-1.707;QD=17.23;ReadPosRankSum=3.456;VQSLOD=5.5655;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,30:33:80.98:703,81,0	1/1:1,7:8:20.99:182,21,0	0/1:33,2:28:25.25:25,0,167	0/1:16,0:13:29.19:29,0,32	1/1:2,21:23:56.93:487,57,0	1/1:5,13:18:2.84:253,3,0	1/1:5,14:19:38.99:338,39,0	0/0:16,0:16:26.30:0,26,383	1/1:3,16:19:35.98:312,36,0	1/1:1,17:18:47.92:405,48,0	1/1:5,14:19:35.92:305,36,0	1/1:4,16:21:41.03:344,41,0	1/1:1,21:22:53.99:468,54,0	1/1:1,16:17:44.99:390,45,0	1/1:7,17:24:47.07:415,47,0	1/1:3,21:24:53.20:449,53,0	0/0:19,1:20:34.10:0,34,592	1/1:0,16:16:38.99:338,39,0	0/0:24,0:25:65.98:0,66,682	0/0:25,0:25:66.17:0,66,721	0/0:22,0:22:57.11:0,57,616	1/1:3,16:19:25.38:368,25,0	1/1:5,21:26:56.99:494,57,0	1/1:0,14:14:38.99:338,39,0	1/1:2,23:25:59.99:521,60,0	0/0:23,2:25:14.08:0,14,610	0/0:31,0:31:72.18:0,72,786	0/0:4,0:4:12.03:0,12,132
chr10	45536306	.	G	GGTTT	9689.98	PASS	AB=0.641;AC=29;AF=0.518;AN=56;BaseQRankSum=7.732;DP=725;FS=10.511;HRun=0;HaplotypeScore=138.2731;InbreedingCoeff=0.8721;MQ=71.01;MQ0=3;MQRankSum=-3.852;QD=25.23;ReadPosRankSum=0.523;VQSLOD=4.1442;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:31:27.09:471,27,0	0/0:8,0:7:18.03:0,18,259	0/0:26,0:23:12:0,12,182	0/0:31,0:29:23.80:0,24,333	0/1:11,14:25:9.18:757,0,9	0/0:27,0:28:51.17:0,51,801	0/0:25,0:26:60.20:0,60,941	0/0:34,0:34:36.11:0,36,555	1/1:15,0:26:9.03:157,9,0	1/1:17,21:38:66.21:1516,66,0	1/1:3,11:15:39.09:864,39,0	1/1:6,0:14:12.04:209,12,0	1/1:18,1:30:18.06:313,18,0	1/1:16,0:31:30.10:512,30,0	1/1:8,18:29:48.16:1157,48,0	1/1:6,17:23:39.13:940,39,0	0/0:31,0:31:81.26:0,81,1281	1/1:11,17:28:45.15:1078,45,0	0/0:32,0:32:45.13:0,45,679	0/0:22,0:22:45.15:0,45,724	0/0:23,0:23:45.15:0,45,722	1/1:13,0:24:29.99:463,30,0	1/1:15,0:25:24:372,24,0	1/1:12,0:25:8.21:93,8,0	1/1:7,12:20:33.11:787,33,0	0/0:29,1:30:0.19:0,0,1019	0/0:33,0:32:75.26:0,75,1208	0/0:17,0:17:45.14:0,45,701
chr10	45536751	.	G	GTTGTTTTGTTTTGTT	18754.96	PASS	AB=0.588;AC=39;AF=0.696;AN=56;BaseQRankSum=-8.808;DP=774;FS=7.625;HRun=0;HaplotypeScore=269.9184;InbreedingCoeff=0.8786;MQ=55.82;MQ0=3;MQRankSum=-8.129;QD=32.73;ReadPosRankSum=-4.316;VQSLOD=2.4327;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:17,10:35:26.98:2260,27,0	1/1:6,4:13:12.04:858,12,0	0/0:34,0:26:26.93:0,27,485	0/0:19,0:14:10.04:0,10,388	1/1:12,0:36:48.11:1283,48,0	1/1:9,0:25:18.06:574,18,0	1/1:12,0:27:15.05:478,15,0	1/1:38,0:38:45.64:578,46,0	1/1:9,7:26:18.06:1288,18,0	1/1:12,0:34:51.17:1438,51,0	1/1:7,0:19:8.99:216,9,0	1/1:14,8:33:21.07:1498,21,0	1/1:9,7:24:18.01:1287,18,0	1/1:11,8:33:21.07:1502,21,0	1/1:20,0:35:21.54:670,22,0	1/1:10,0:26:18.06:693,18,0	0/0:26,0:26:57.17:0,57,1844	1/1:13,0:27:18.06:530,18,0	0/0:10,0:17:17.49:0,17,518	0/0:8,0:25:38.25:0,38,1112	0/0:10,0:23:30.10:0,30,982	1/1:11,2:22:11.99:494,12,0	1/1:13,4:26:12.04:857,12,0	1/1:17,5:29:18.06:1208,18,0	1/1:8,0:25:21.54:689,22,0	0/1:12,0:40:9.21:353,0,9	0/0:8,0:40:72.25:0,72,2416	0/0:2,0:14:30.10:0,30,992
chr10	45537336	.	GT	G	9338.94	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=3.617;DP=487;FS=11.733;HRun=10;HaplotypeScore=85.9656;InbreedingCoeff=0.9043;MQ=57.96;MQ0=2;MQRankSum=-2.017;QD=20.53;ReadPosRankSum=1.012;VQSLOD=4.9417;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,20:25:65.95:566,66,0	1/1:3,10:13:29.99:260,30,0	0/0:7,0:6:5.50:0,6,40	0/0:4,0:3:6.45:0,6,49	1/1:6,16:22:44.97:390,45,0	1/1:1,14:15:41.99:364,42,0	1/1:1,6:7:20.98:178,21,0	1/1:4,29:33:86.90:738,87,0	1/1:5,18:23:50.97:440,51,0	1/1:5,16:21:53.99:469,54,0	1/1:5,15:20:47.97:413,48,0	1/1:6,8:14:32.96:282,33,0	1/1:3,12:15:35.98:312,36,0	1/1:3,9:12:26.98:234,27,0	1/1:4,18:22:59.96:517,60,0	1/1:2,16:18:50.98:440,51,0	0/0:21,0:21:60.14:0,60,652	1/1:10,9:19:35.87:295,36,0	1/1:8,19:27:38.79:563,39,0	1/1:6,7:13:26.99:234,27,0	1/1:6,9:15:29.94:254,30,0	1/1:5,6:11:20.98:180,21,0	1/1:7,8:15:35.97:309,36,0	1/1:1,5:5:12:104,12,0	1/1:2,9:11:29.99:260,30,0	1/1:9,25:34:50.81:594,51,0	1/1:6,23:29:71.97:625,72,0	1/1:3,12:15:38.03:318,38,0
chr10	45538470	.	G	GA	2032.05	PASS	AB=0.697;AC=30;AF=0.556;AN=54;BaseQRankSum=6.821;DP=451;FS=1.611;HRun=12;HaplotypeScore=64.7165;InbreedingCoeff=0.3705;MQ=56.58;MQ0=6;MQRankSum=-3.257;QD=7.01;ReadPosRankSum=-0.719;VQSLOD=2.0952;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,1:26:22.91:121,23,0	1/1:0,0:3:2.84:14,3,0	0/0:9,0:4:7.78:0,8,49	0/1:12,1:5:12.60:37,0,13	0/1:5,7:11:22.76:125,0,23	1/1:6,10:16:2.08:173,2,0	0/1:7,8:14:16.78:177,0,17	0/0:33,0:33:65.49:0,65,481	1/1:8,6:15:10.46:61,10,0	0/1:9,13:22:7.80:246,0,8	0/1:2,6:8:3.88:128,0,4	1/1:9,0:21:6.62:30,7,0	1/1:14,1:15:14.89:119,15,0	1/1:9,0:10:18.45:98,18,0	1/1:3,13:17:18.03:175,18,0	1/1:5,9:12:14.86:131,15,0	0/0:27,0:29:48.59:0,49,340	0/1:8,15:25:69.24:269,0,69	0/1:12,1:12:8.35:8,0,110	0/0:3,0:4:8:0,8,50	0/0:27,0:29:57.75:0,58,418	./.	1/1:1,2:12:8.77:61,9,0	1/1:3,0:18:17.16:91,17,0	0/1:4,7:10:0.87:154,0,1	0/0:13,0:16:32.91:0,33,213	0/0:18,0:20:45.77:0,46,318	0/0:15,0:15:38.71:0,39,281
chr10	45539036	.	CCACCGTTCCCTTG	C	8305.28	PASS	AC=50;AF=1.000;AN=50;DP=190;FS=0.000;HRun=0;HaplotypeScore=71.2309;InbreedingCoeff=-0.0680;MQ=33.60;MQ0=30;QD=48.29;VQSLOD=3.6039;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,11:10:18.06:735,18,0	1/1:0,2:2:3.01:123,3,0	1/1:9,0:1:2.99:24,3,0	./.	1/1:10,0:10:23.92:469,24,0	1/1:3,0:3:6.02:165,6,0	1/1:13,0:6:6.02:165,6,0	1/1:2,3:2:2.97:20,3,0	1/1:0,1:1:3.01:123,3,0	1/1:7,0:5:12.01:215,12,0	./.	1/1:4,0:4:11.83:77,12,0	./.	1/1:1,2:2:3.01:123,3,0	1/1:5,0:4:8.98:184,9,0	1/1:8,0:8:18.06:495,18,0	1/1:2,6:8:8.82:155,9,0	1/1:6,0:5:9.03:247,9,0	1/1:3,6:7:18.02:633,18,0	1/1:0,7:6:12.04:490,12,0	1/1:2,11:11:17.67:527,18,0	1/1:2,6:8:24.02:780,24,0	1/1:0,6:4:9.03:368,9,0	1/1:3,6:6:6.02:245,6,0	1/1:5,0:5:12.04:330,12,0	1/1:0,13:13:36.01:1000,36,0	1/1:0,6:6:12.04:491,12,0	1/1:0,1:1:3.01:123,3,0
chr10	45539037	.	CACCGTTCCCTTG	C	7844.58	PASS	AC=48;AF=0.960;AN=50;BaseQRankSum=1.111;DP=185;FS=0.000;HRun=0;HaplotypeScore=68.7137;InbreedingCoeff=0.1578;MQ=32.75;MQ0=31;MQRankSum=-1.995;QD=48.42;ReadPosRankSum=1.486;VQSLOD=3.9623;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:10:18.06:561,18,0	1/1:2,0:2:3.01:94,3,0	1/1:10,0:1:2.99:24,3,0	./.	1/1:0,10:10:24.08:691,24,0	1/1:0,3:3:6.02:237,6,0	1/1:2,11:6:6.02:237,6,0	0/0:4,0:1:2.50:0,2,9	1/1:1,0:1:3.01:94,3,0	1/1:0,7:5:12.03:309,12,0	./.	1/1:4,0:4:8.74:59,9,0	./.	1/1:3,0:2:3.01:94,3,0	1/1:1,4:4:9.03:287,9,0	1/1:0,8:8:18.06:712,18,0	1/1:6,0:6:2.53:92,3,0	1/1:0,5:4:9.03:356,9,0	1/1:7,0:6:18.02:488,18,0	1/1:7,0:6:12.04:375,12,0	1/1:13,0:11:14.67:394,15,0	1/1:8,0:8:24.02:607,24,0	1/1:6,0:4:9.03:281,9,0	1/1:8,0:5:6.02:187,6,0	1/1:0,5:5:12.04:475,12,0	1/1:13,0:13:23.39:722,23,0	1/1:6,0:6:12.04:375,12,0	1/1:1,0:1:3.01:94,3,0
chr10	45539303	.	G	GAAACTTAC	34971.67	PASS	AB=0.611;AC=49;AF=0.875;AN=56;BaseQRankSum=-4.891;DP=352;FS=20.711;HRun=0;HaplotypeScore=110.0822;InbreedingCoeff=0.8093;MQ=70.06;MQ0=1;MQRankSum=-8.244;QD=110.32;ReadPosRankSum=2.807;VQSLOD=4.3704;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,7:14:39.13:1536,39,0	1/1:1,4:6:18.06:718,18,0	0/0:17,0:17:48.16:0,48,1251	0/0:9,0:8:14.97:0,15,282	1/1:2,16:19:51.17:2199,51,0	1/1:5,5:9:19.78:735,20,0	1/1:1,3:5:12.04:446,12,0	1/1:14,9:24:63.03:2648,63,0	1/1:2,5:9:18.06:777,18,0	1/1:3,15:18:54.19:2440,54,0	1/1:5,4:9:27.09:974,27,0	1/1:6,16:22:63.22:2762,63,0	1/1:2,11:13:39.13:1744,39,0	1/1:2,7:10:27.09:1177,27,0	1/1:3,7:11:24.07:1083,24,0	1/1:7,9:17:42.08:1641,42,0	0/0:9,0:9:27.09:0,27,791	0/1:4,5:11:56.77:912,0,57	1/1:8,6:14:39.07:1542,39,0	1/1:5,11:17:45.11:1817,45,0	1/1:0,6:6:18.06:810,18,0	1/1:8,11:20:52.06:1940,52,0	1/1:1,11:15:33.11:1488,33,0	1/1:0,7:7:21.07:944,21,0	1/1:4,9:13:36.12:1509,36,0	1/1:4,6:11:33.09:1377,33,0	1/1:3,5:8:24.08:940,24,0	1/1:0,6:7:18.06:814,18,0
chr10	45540222	.	TG	T	9723.76	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=12.751;DP=652;FS=0.654;HRun=7;HaplotypeScore=87.9451;InbreedingCoeff=0.9984;MQ=77.45;MQ0=0;MQRankSum=-3.102;QD=24.68;ReadPosRankSum=4.001;VQSLOD=5.0501;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,34:38:96.21:979,96,0	1/1:1,6:7:18.04:184,18,0	0/0:24,0:22:57.14:0,57,645	0/0:22,0:21:51.08:0,51,569	1/1:3,23:26:60.13:612,60,0	1/1:0,17:17:45.10:459,45,0	1/1:4,14:18:42.09:429,42,0	0/0:23,0:23:60.12:0,60,689	1/1:2,24:26:66.15:673,66,0	1/1:5,24:29:72.14:726,72,0	1/1:1,22:23:54.12:551,54,0	1/1:2,17:19:45.10:459,45,0	1/1:1,20:21:54.12:551,54,0	1/1:3,23:26:60.13:612,60,0	1/1:4,29:33:78.17:796,78,0	1/1:1,19:20:57.13:582,57,0	0/0:26,0:26:75.24:0,75,942	1/1:1,20:21:45.10:459,45,0	0/0:24,0:24:60.15:0,60,726	0/0:24,0:25:56.99:0,57,669	0/0:41,0:41:99:0,108,1331	1/1:2,21:23:57.13:582,57,0	1/1:1,17:18:39.07:398,39,0	1/1:2,13:15:36.08:367,36,0	1/1:4,10:14:30.06:306,30,0	0/0:26,0:26:69.21:0,69,855	0/0:38,0:38:96.31:0,96,1207	0/0:9,0:9:24.06:0,24,289
chr10	45540734	.	A	ATTT	2572.09	PASS	AB=0.776;AC=30;AF=0.536;AN=56;BaseQRankSum=-3.327;DP=546;FS=4.307;HRun=15;HaplotypeScore=95.8673;InbreedingCoeff=0.3032;MQ=78.93;MQ0=10;MQRankSum=-2.102;QD=6.60;ReadPosRankSum=-1.460;VQSLOD=0.0201;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:34:1.66:0,2,184	1/1:4,6:12:6:74,6,0	0/1:52,0:31:26.90:27,0,35	0/1:49,0:19:36.30:36,0,61	1/1:9,2:20:26.49:293,26,0	1/1:6,8:18:39.04:511,39,0	1/1:13,8:26:22.27:273,22,0	0/0:16,0:18:32.59:0,33,310	1/1:6,0:15:3.74:9,4,0	1/1:14,1:15:18.06:240,18,0	0/1:5,4:16:28.89:268,0,29	1/1:1,0:8:2.49:6,2,0	0/1:7,0:17:5.05:24,0,5	0/1:8,0:18:39.47:42,0,39	1/1:6,11:17:9.01:125,9,0	1/1:5,1:10:12:147,12,0	0/0:18,0:19:30.88:0,31,302	1/1:10,11:26:32.24:387,32,0	0/0:4,0:10:20.36:0,20,120	0/0:6,0:17:31.81:0,32,188	0/0:4,0:22:43.62:0,44,257	0/1:8,0:13:14.23:60,0,14	0/1:7,0:13:19.89:20,0,45	0/0:8,0:13:2.55:0,3,76	1/1:12,8:22:13.27:178,13,0	0/1:18,1:21:40.63:41,0,63	0/0:4,0:16:25.90:0,26,154	0/0:3,0:5:5.73:0,6,34
chr10	45542463	.	TTCTCTCTCTCTCTCTCTCTC	T	1110.35	PASS	AC=10;AF=0.192;AN=52;BaseQRankSum=0.739;DP=519;FS=9.780;HRun=0;HaplotypeScore=226.6546;InbreedingCoeff=0.7211;MQ=66.61;MQ0=38;MQRankSum=-1.973;QD=13.38;ReadPosRankSum=0.795;VQSLOD=1.5475;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:32:24.08:0,24,1136	0/0:6,0:6:9.50:0,10,548	0/0:37,0:16:2.84:0,3,14	0/0:43,0:19:15.04:0,15,214	0/0:23,0:22:15.05:0,15,839	0/0:15,0:15:15.02:0,15,453	0/0:22,0:20:21.07:0,21,627	1/1:20,0:18:4.41:77,4,0	0/0:20,0:18:18.95:0,19,856	0/0:12,0:11:11.02:0,11,574	0/0:18,0:17:12.04:0,12,654	0/0:22,0:22:30.10:0,30,1684	0/0:18,0:18:34.36:0,34,1983	0/0:15,0:14:9.50:0,10,763	0/0:14,0:14:21.07:0,21,1162	0/0:12,0:12:18.06:0,18,1467	0/0:20,0:18:24.06:0,24,1531	0/0:12,0:12:27.09:0,27,1194	1/1:19,2:18:0.65:303,1,0	./.	./.	0/0:20,0:19:18.05:0,18,837	0/0:9,0:9:21.07:0,21,1171	0/0:25,0:25:30.10:0,30,2040	0/0:14,0:13:3.01:0,3,72	1/1:16,1:16:12.02:291,12,0	1/1:7,4:10:8.86:465,9,0	1/1:13,0:11:6.02:115,6,0
chr10	45542511	.	CTGTGTGTGTG	C	407.86	PASS	AB=0.830;AC=14;AF=0.292;AN=48;BaseQRankSum=2.747;DP=451;FS=20.633;HRun=0;HaplotypeScore=137.9436;InbreedingCoeff=0.3963;MQ=35.96;MQ0=41;MQRankSum=-2.400;QD=2.28;ReadPosRankSum=0.056;VQSLOD=0.9686;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:38,9:42:2.19:55,2,0	0/1:6,0:8:14.92:15,0,30	./.	./.	1/1:23,0:23:0.41:1,0,0	0/0:14,0:13:9.03:0,9,295	0/0:26,0:21:12.98:0,13,483	0/0:18,0:14:21.07:0,21,588	1/1:9,4:12:2.14:78,2,0	0/0:16,0:16:27.09:0,27,768	./.	0/0:9,1:8:0.47:0,0,1	1/1:17,5:22:5.98:170,6,0	1/1:14,8:18:5.41:168,5,0	0/0:20,0:19:3.95:0,4,122	0/0:19,0:19:8.02:0,8,94	0/0:17,0:12:18.01:0,18,474	0/0:12,0:10:15.05:0,15,427	0/0:11,0:11:12.04:0,12,330	0/1:8,0:8:0:0,0,0	0/0:18,0:13:2.16:0,2,6	0/1:8,4:10:0:0,0,0	./.	0/1:18,5:21:45.18:45,0,59	0/0:14,0:12:3.01:0,3,124	0/0:27,0:25:60.10:0,60,1646	0/0:27,0:25:30.35:0,30,697	0/0:5,0:5:3.01:0,3,54
chr10	45542553	.	G	GTA	4715.19	PASS	AB=0.854;AC=48;AF=0.857;AN=56;BaseQRankSum=0.725;DP=467;FS=12.096;HRun=0;HaplotypeScore=117.4960;InbreedingCoeff=0.6346;MQ=64.28;MQ0=15;MQRankSum=-0.907;QD=11.56;ReadPosRankSum=2.758;VQSLOD=3.8873;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:36,0:35:50.61:376,51,0	1/1:9,0:8:9.34:65,9,0	0/0:23,0:15:44.94:0,45,425	0/0:24,0:20:53.86:0,54,531	1/1:9,5:14:5.67:46,6,0	1/1:19,0:19:26.97:264,27,0	1/1:26,0:24:44.87:447,45,0	1/1:19,0:18:32.28:291,32,0	1/1:10,0:9:15.46:109,15,0	1/1:16,0:16:33.18:279,33,0	1/1:4,6:10:2.92:17,3,0	1/1:6,0:6:14.97:123,15,0	1/1:13,0:13:21.67:150,22,0	1/1:18,0:16:18.91:151,19,0	1/1:25,0:25:32.64:271,33,0	1/1:8,1:21:1.23:4,1,0	0/0:12,0:10:17.98:0,18,120	1/1:3,1:9:11.40:123,11,0	1/1:12,0:12:31.83:210,32,0	1/1:16,0:16:27.43:223,27,0	1/1:18,0:17:22.70:197,23,0	1/1:8,0:8:11.85:88,12,0	1/1:9,0:8:20.84:152,21,0	0/1:18,0:17:0.83:128,0,1	1/1:19,0:18:26.93:244,27,0	0/1:17,12:28:19.28:370,0,19	1/1:19,0:19:35.32:260,35,0	1/1:9,0:9:17.61:125,18,0
chr10	45544949	.	C	CTT	2986.19	PASS	AB=0.923;AC=41;AF=0.732;AN=56;BaseQRankSum=-3.567;DP=406;FS=19.268;HRun=13;HaplotypeScore=65.6232;InbreedingCoeff=0.5940;MQ=60.41;MQ0=12;MQRankSum=-3.918;QD=10.86;ReadPosRankSum=-2.421;VQSLOD=0.1108;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,2:32:26.94:268,27,0	1/1:3,1:4:3.48:42,3,0	0/1:13,0:10:21.49:21,0,47	0/1:8,0:4:12.16:12,0,36	1/1:16,2:19:17.96:179,18,0	1/1:4,7:12:14.50:152,15,0	1/1:11,7:20:29.99:327,30,0	1/1:11,7:18:6.19:290,6,0	1/1:7,1:12:8.97:88,9,0	1/1:5,4:8:9.01:106,9,0	0/1:7,2:10:5.77:147,0,6	1/1:3,0:6:3.01:41,3,0	1/1:4,2:7:6.01:69,6,0	1/1:3,1:7:9.02:98,9,0	1/1:6,8:12:18.05:232,18,0	1/1:5,4:9:8.93:80,9,0	0/0:38,0:37:66.09:0,66,602	1/1:4,3:9:14.48:150,14,0	0/0:15,0:26:38.85:0,39,194	0/0:3,0:16:25.19:0,25,115	0/0:7,0:11:13.89:0,14,73	1/1:6,0:6:8.97:77,9,0	1/1:7,0:7:5.92:39,6,0	1/1:6,2:9:12.03:138,12,0	1/1:9,9:18:18.01:223,18,0	1/1:7,10:17:33.02:393,33,0	0/0:5,0:23:37.58:0,38,193	0/0:5,0:9:16.70:0,17,85
chr10	45546741	.	CAGTA	C	15646.58	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=14.982;DP=589;FS=5.091;HRun=0;HaplotypeScore=117.6484;InbreedingCoeff=0.9933;MQ=80.21;MQ0=0;MQRankSum=-8.872;QD=44.96;ReadPosRankSum=4.846;VQSLOD=5.5163;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,27:30:72.25:1314,72,0	1/1:1,5:6:12.04:224,12,0	0/0:21,0:21:60.20:0,60,1536	0/0:25,0:25:63.20:0,63,1545	1/1:1,22:23:50.71:951,51,0	1/1:2,17:19:48.16:893,48,0	1/1:2,27:29:72:1340,72,0	0/0:34,0:34:93.29:0,93,2371	1/1:1,19:20:51.17:945,51,0	1/1:4,23:27:72.25:1328,72,0	1/1:2,14:16:32.45:615,32,0	1/1:1,28:29:69.24:1281,69,0	1/1:0,16:16:42.14:784,42,0	1/1:1,16:17:42.14:784,42,0	1/1:2,21:23:60.21:1119,60,0	1/1:0,21:21:54.19:1008,54,0	0/0:32,0:32:87.30:0,87,2313	1/1:4,19:23:57.20:1064,57,0	0/0:24,0:24:63.22:0,63,1650	0/0:13,0:13:36.11:0,36,899	0/0:42,0:42:99:0,117,3034	1/1:1,12:13:21.54:392,22,0	1/1:1,8:9:18.06:336,18,0	1/1:0,13:13:33.11:616,33,0	1/1:0,14:14:36.12:654,36,0	0/0:21,0:21:60.20:0,60,1543	0/0:21,0:21:57.15:0,57,1432	0/0:8,0:8:24.08:0,24,607
chr10	45549985	.	CTTCT	C	6220.09	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=13.190;DP=622;FS=6.696;HRun=0;HaplotypeScore=105.3541;InbreedingCoeff=0.9949;MQ=81.30;MQ0=0;MQRankSum=-2.895;QD=46.07;ReadPosRankSum=1.580;VQSLOD=5.3068;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,126,3401	0/0:12,0:12:36.12:0,36,951	0/0:17,0:17:51.17:0,51,1274	0/0:16,0:16:45.15:0,45,1189	1/1:0,23:23:66.11:1130,66,0	0/0:16,0:16:48.16:0,48,1285	0/0:20,0:20:60.19:0,60,1548	0/0:26,0:26:75.26:0,75,1966	0/0:20,0:20:60.21:0,60,1605	1/1:3,20:23:60.18:1108,60,0	1/1:1,7:8:21.02:294,21,0	0/0:31,0:31:87.30:0,87,2383	0/0:20,0:20:57.20:0,57,1535	0/0:27,0:27:78.27:0,78,2099	1/1:1,20:21:51.17:958,51,0	1/1:1,18:19:51.17:989,51,0	0/0:33,0:33:99:0,99,2681	1/1:1,19:20:39.13:733,39,0	0/0:23,0:23:69.22:0,69,1804	0/0:15,0:15:45.15:0,45,1199	0/0:40,0:40:99:0,117,3185	0/0:23,0:23:63.22:0,63,1712	0/0:25,0:25:75.26:0,75,2029	0/0:26,0:25:72.25:0,72,1973	1/1:1,20:21:57.19:1009,57,0	0/0:24,1:25:14.08:0,14,1802	0/0:22,0:22:66.21:0,66,1751	0/0:7,0:7:21.07:0,21,565
chr10	45550641	.	T	TTTCTTCTCCTTCTTC	11119.08	PASS	AB=0.859;AC=34;AF=0.607;AN=56;BaseQRankSum=5.099;DP=694;FS=0.000;HRun=0;HaplotypeScore=214.1719;InbreedingCoeff=0.0623;MQ=66.33;MQ0=12;MQRankSum=-5.980;QD=19.54;ReadPosRankSum=-5.492;VQSLOD=2.2923;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:36,0:37:13.33:351,13,0	1/1:15,0:14:41.74:662,42,0	0/0:21,0:14:26.16:0,26,297	0/0:28,0:23:44.63:0,45,434	0/1:35,0:34:99:604,0,254	1/1:4,0:31:6.02:284,6,0	1/1:22,0:21:56.84:903,57,0	0/0:32,0:29:65.95:0,66,601	1/1:23,0:23:57.03:937,57,0	0/1:26,0:26:94.62:1140,0,95	0/1:27,0:26:99:443,0,316	1/1:20,0:20:27.01:622,27,0	1/1:25,0:26:12.04:493,12,0	1/1:4,13:22:3.01:219,3,0	0/1:20,0:20:99:492,0,146	0/1:15,0:21:26.18:26,0,273	0/0:21,0:30:71.75:0,72,958	0/1:20,0:21:99:431,0,208	0/1:17,0:15:67.82:68,0,179	0/1:19,0:28:99:219,0,293	0/0:13,0:13:29.95:0,30,250	1/1:0,12:23:20.64:325,21,0	1/1:18,0:18:39.01:1154,39,0	1/1:25,0:26:53.40:974,53,0	0/1:13,0:43:99:308,0,261	0/1:26,0:25:99:257,0,378	0/1:9,0:22:98.70:99,0,151	0/1:8,0:15:99:109,0,102
chr10	45550646	.	T	TCTC	2099.56	PASS	AB=0.915;AC=20;AF=0.357;AN=56;BaseQRankSum=4.255;DP=689;FS=2.514;HRun=0;HaplotypeScore=93.0451;InbreedingCoeff=0.1603;MQ=61.48;MQ0=21;MQRankSum=-0.424;QD=6.07;ReadPosRankSum=2.747;VQSLOD=2.4448;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:9,24:34:4.22:4,0,50	1/1:16,0:15:4.31:219,4,0	0/0:18,0:11:26.16:0,26,297	0/0:25,0:20:44.63:0,45,434	0/1:33,0:32:71.25:71,0,306	0/1:30,0:30:52.82:117,0,53	1/1:21,0:20:26.50:363,26,0	0/0:43,0:25:66.02:0,66,606	1/1:20,0:20:26.49:493,26,0	0/1:25,0:24:53.31:53,0,164	0/0:27,0:26:53.13:0,53,439	0/1:21,0:21:46.10:189,0,46	0/1:7,19:27:56.73:66,0,57	1/1:18,0:18:3.01:46,3,0	0/0:21,0:21:11.82:0,12,222	0/0:20,0:20:21.72:0,22,319	0/0:29,0:29:71.73:0,72,606	0/1:20,0:20:9.80:10,0,250	0/0:20,0:17:48.22:0,48,374	0/0:35,0:33:0.48:0,0,435	0/0:12,0:12:29.95:0,30,250	0/1:21,0:21:10.18:82,0,10	0/1:17,0:16:20.69:136,0,21	1/1:26,0:26:22.42:415,22,0	0/0:43,0:43:26.79:0,27,353	0/0:25,0:24:38.80:0,39,447	0/0:24,0:24:10.63:0,11,205	0/1:17,0:16:12.29:12,0,126
chr10	45550647	.	C	CTCC	2099.56	PASS	AB=0.968;AC=20;AF=0.357;AN=56;BaseQRankSum=4.255;DP=691;FS=2.514;HRun=0;HaplotypeScore=93.3813;InbreedingCoeff=0.1603;MQ=61.28;MQ0=23;MQRankSum=-0.881;QD=6.07;ReadPosRankSum=2.925;VQSLOD=2.2999;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:33:4.22:4,0,50	1/1:16,0:15:4.31:219,4,0	0/0:18,0:11:26.16:0,26,297	0/0:25,0:20:44.63:0,45,434	0/1:33,0:32:71.25:71,0,306	0/1:28,0:28:52.82:117,0,53	1/1:22,0:21:26.50:363,26,0	0/0:45,0:27:66.02:0,66,607	1/1:21,0:21:26.49:493,26,0	0/1:25,0:24:53.31:53,0,164	0/0:28,0:26:53.13:0,53,439	0/1:11,9:21:46.10:189,0,46	0/1:27,0:27:56.73:66,0,57	1/1:18,0:18:3.01:46,3,0	0/0:22,0:21:11.82:0,12,222	0/0:19,0:19:21.72:0,22,319	0/0:31,0:30:71.73:0,72,606	0/1:21,0:21:9.80:10,0,250	0/0:20,0:17:48.22:0,48,374	0/0:34,0:32:0.48:0,0,435	0/0:12,0:12:29.95:0,30,250	0/1:21,0:21:10.18:82,0,10	0/1:17,0:16:20.69:136,0,21	1/1:26,0:26:22.42:415,22,0	0/0:43,0:43:26.79:0,27,353	0/0:24,0:23:38.80:0,39,447	0/0:24,0:24:10.63:0,11,205	0/1:17,0:16:12.29:12,0,126
chr10	45550890	.	G	GTGTTT	23958.53	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-8.945;DP=772;FS=0.000;HRun=0;HaplotypeScore=146.8265;InbreedingCoeff=0.9963;MQ=60.31;MQ0=4;MQRankSum=-9.157;QD=49.60;ReadPosRankSum=2.165;VQSLOD=5.2471;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:15,31:50:99:2805,108,0	1/1:3,7:10:21.07:604,21,0	0/0:36,0:30:30.98:0,31,563	0/0:42,0:30:57.65:0,58,954	1/1:14,14:30:45.07:845,45,0	1/1:8,13:24:36.59:1035,37,0	1/1:11,18:30:48.16:1376,48,0	0/0:39,0:39:56.32:0,56,967	1/1:11,17:29:57.20:1578,57,0	1/1:11,16:28:54.19:1509,54,0	1/1:10,9:19:18.06:328,18,0	1/1:11,21:32:69.21:1815,69,0	1/1:7,17:26:53.87:1495,54,0	1/1:11,13:25:51.17:1368,51,0	1/1:12,24:36:75.26:2111,75,0	1/1:8,25:34:75.26:2113,75,0	0/0:39,0:39:96.33:0,96,1793	1/1:3,8:11:21.07:604,21,0	0/0:31,0:31:51.15:0,51,923	0/0:25,0:25:48.15:0,48,864	0/0:25,0:25:60.19:0,60,1094	1/1:12,14:27:42.14:1156,42,0	1/1:10,7:17:21.07:491,21,0	1/1:12,18:30:57.67:1607,58,0	1/1:10,14:25:39.13:1119,39,0	0/0:22,0:22:45.15:0,45,845	0/0:17,0:17:42.14:0,42,767	0/0:11,0:11:21.07:0,21,394
chr10	45552196	.	G	GAAA	10322.39	PASS	AB=1.000;AC=38;AF=0.679;AN=56;BaseQRankSum=-1.344;DP=550;FS=0.375;HRun=9;HaplotypeScore=81.6456;InbreedingCoeff=0.8487;MQ=65.55;MQ0=3;MQRankSum=-3.638;QD=28.83;ReadPosRankSum=1.219;VQSLOD=3.5092;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,18:24:43.64:736,44,0	1/1:3,4:7:9.03:177,9,0	0/1:24,0:12:15.62:16,0,159	0/1:26,0:9:0.73:1,0,59	1/1:8,17:25:26.90:675,27,0	1/1:2,1:22:44.35:362,44,0	1/1:1,0:3:7.23:50,7,0	0/0:26,0:27:62.68:0,63,744	1/1:2,21:23:54.18:1032,54,0	1/1:6,16:23:57.19:1043,57,0	1/1:3,19:25:54.05:902,54,0	1/1:5,11:17:30.08:546,30,0	1/1:3,8:13:24.01:397,24,0	1/1:0,7:7:15.05:296,15,0	1/1:1,15:18:33.11:621,33,0	1/1:1,12:14:36.12:694,36,0	0/0:23,0:23:63.18:0,63,782	1/1:4,16:20:39.13:747,39,0	0/0:34,0:34:75.03:0,75,927	0/0:25,0:25:60.15:0,60,732	0/0:15,0:15:39.10:0,39,491	1/1:2,12:17:42.04:696,42,0	1/1:5,11:19:28.05:497,28,0	1/1:0,7:7:12.31:236,12,0	1/1:4,16:24:33.09:599,33,0	0/0:34,0:35:93.19:0,93,1133	0/0:25,0:24:66.17:0,66,805	0/0:8,0:8:19.99:0,20,263
chr10	45552942	.	TA	T	15527.70	PASS	AB=0.897;AC=37;AF=0.661;AN=56;BaseQRankSum=12.728;DP=655;FS=0.605;HRun=1;HaplotypeScore=65.5665;InbreedingCoeff=0.9202;MQ=84.48;MQ0=0;MQRankSum=-3.560;QD=36.71;ReadPosRankSum=5.445;VQSLOD=4.9359;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,38:38:99:1469,105,0	1/1:0,9:9:27.09:378,27,0	0/0:25,0:25:75.25:0,75,1167	0/0:18,0:18:48.16:0,48,766	1/1:0,21:21:60.16:817,60,0	1/1:0,18:18:51.17:713,51,0	1/1:0,27:27:75.25:1049,75,0	0/0:26,0:26:78.27:0,78,1244	1/1:0,27:27:75.25:1049,75,0	1/1:0,17:17:51.17:713,51,0	1/1:0,16:16:45.15:629,45,0	1/1:0,24:24:66.22:922,66,0	1/1:0,19:19:48.16:671,48,0	1/1:0,24:24:69.23:965,69,0	1/1:0,21:21:57.19:797,57,0	1/1:0,15:15:45.15:629,45,0	0/0:41,0:41:99:0,120,1892	1/1:0,17:17:45.15:629,45,0	0/0:24,0:24:72.25:0,72,1144	0/0:21,0:21:63.21:0,63,1003	0/0:33,0:33:96.30:0,96,1509	1/1:0,24:24:63.21:880,63,0	1/1:0,21:21:57.02:797,57,0	1/1:0,35:35:99:1364,99,0	1/1:0,24:24:72.24:1007,72,0	0/1:23,3:26:47.63:48,0,1025	0/0:29,0:29:87.27:0,87,1361	0/0:15,0:15:45.15:0,45,715
chr10	45555449	.	TG	T	1355.36	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.546;DP=684;FS=0.000;HRun=4;HaplotypeScore=64.0379;InbreedingCoeff=0.9210;MQ=85.27;MQ0=1;MQRankSum=-2.348;QD=27.66;ReadPosRankSum=-3.144;VQSLOD=1.7341;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,123,1692	0/0:9,0:9:27.09:0,27,378	0/0:27,0:28:72.86:0,73,993	0/0:15,0:15:45.15:0,45,630	0/0:22,0:22:63.21:0,63,882	0/0:24,0:24:63.21:0,63,881	0/0:32,0:32:93.30:0,93,1285	1/1:2,21:23:63.19:752,63,0	0/0:19,0:19:57.19:0,57,798	0/0:25,0:25:69.19:0,69,944	0/0:11,0:11:30.09:0,30,403	0/0:37,0:37:99:0,108,1512	0/0:25,0:25:72.24:0,72,1007	0/0:18,0:18:51.17:0,51,714	0/0:23,0:23:66.22:0,66,924	0/0:17,0:17:51.15:0,51,682	0/0:38,0:38:99:0,114,1595	0/0:25,0:25:63.21:0,63,882	0/0:19,0:19:54.18:0,54,756	0/0:19,0:19:48.16:0,48,672	0/0:44,0:44:99:0,126,1741	0/0:31,0:31:87.22:0,87,1160	0/0:14,0:14:39.13:0,39,545	0/0:38,0:36:99:0,108,1493	0/0:18,0:18:51.17:0,51,714	1/1:2,24:26:4.27:713,4,0	0/0:25,0:25:75.25:0,75,1049	0/0:16,0:16:48.16:0,48,667
chr10	45556407	.	C	CTT	4930.76	PASS	AB=1.000;AC=37;AF=0.685;AN=54;BaseQRankSum=5.468;DP=486;FS=1.192;HRun=8;HaplotypeScore=95.4401;InbreedingCoeff=0.9027;MQ=39.50;MQ0=22;MQRankSum=-4.619;QD=15.13;ReadPosRankSum=0.663;VQSLOD=2.4561;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,2:21:21:231,21,0	1/1:2,0:4:6.01:57,6,0	./.	0/1:8,0:3:0:0,0,0	1/1:16,16:31:38.88:453,39,0	1/1:6,1:17:33.17:334,33,0	1/1:8,1:15:24.04:248,24,0	0/0:24,0:22:32.79:0,33,361	1/1:11,0:17:21.03:200,21,0	1/1:14,11:23:45.14:650,45,0	1/1:10,11:21:22.80:282,23,0	1/1:7,0:12:16.27:146,16,0	1/1:4,1:12:20.96:172,21,0	1/1:7,1:9:15.50:166,16,0	1/1:6,17:22:41.73:629,42,0	1/1:7,11:17:21.03:305,21,0	0/0:33,0:30:21.40:0,21,250	1/1:8,4:12:5.51:57,6,0	0/0:15,0:13:17.96:0,18,188	0/0:14,0:13:24.02:0,24,267	0/0:20,0:20:23.35:0,23,255	1/1:6,0:10:15.02:150,15,0	1/1:15,0:25:27.49:281,27,0	1/1:11,0:14:9.55:66,10,0	1/1:7,11:18:33.10:503,33,0	0/0:23,0:23:17.83:0,18,418	0/0:19,0:19:29.69:0,30,343	0/0:7,0:4:9.02:0,9,100
chr10	45557126	.	A	AAAGG	12519.69	PASS	AB=1.000;AC=41;AF=0.732;AN=56;BaseQRankSum=2.547;DP=689;FS=17.306;HRun=0;HaplotypeScore=181.1571;InbreedingCoeff=0.5240;MQ=51.70;MQ0=6;MQRankSum=-1.119;QD=21.33;ReadPosRankSum=7.343;VQSLOD=3.0290;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:21,5:27:56.91:899,57,0	1/1:5,0:8:24.01:349,24,0	0/0:13,0:8:14.41:0,14,173	0/0:5,0:5:8.47:0,8,107	1/1:23,3:25:43.78:447,44,0	1/1:20,0:18:29.94:324,30,0	1/1:34,0:33:41.98:445,42,0	0/0:42,0:42:80.76:0,81,716	1/1:26,0:31:65.92:827,66,0	1/1:25,10:33:78.09:1157,78,0	1/1:19,4:20:39.05:579,39,0	1/1:16,0:18:35.17:347,35,0	1/1:21,1:25:62.98:765,63,0	1/1:21,0:22:41.92:454,42,0	1/1:28,1:35:75:978,75,0	1/1:23,4:27:69.05:1005,69,0	0/0:23,0:23:17.76:0,18,237	1/1:17,6:21:41:707,41,0	0/1:26,0:25:99:230,0,280	0/1:21,0:21:99:108,0,255	0/0:19,0:19:21.32:0,21,308	1/1:23,0:23:41.73:373,42,0	1/1:14,0:14:32.93:352,33,0	1/1:31,0:31:56.60:545,57,0	1/1:22,6:28:46.40:970,46,0	0/1:23,0:23:31.93:32,0,425	0/1:29,0:28:99:368,0,157	0/1:37,0:37:99:260,0,376
chr10	45557397	.	A	ACC	682.87	PASS	AB=0.926;AC=16;AF=0.286;AN=56;BaseQRankSum=3.585;DP=530;FS=19.267;HRun=0;HaplotypeScore=106.4021;InbreedingCoeff=-0.4087;MQ=41.09;MQ0=38;MQRankSum=-0.194;QD=2.17;ReadPosRankSum=-3.125;VQSLOD=-0.4473;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:30,1:26:77.15:77,0,352	0/0:2,0:2:3.01:0,3,40	0/1:47,0:6:5.74:6,0,39	0/1:47,0:12:35.84:42,0,36	0/0:23,0:20:3.72:0,4,251	0/1:18,1:17:66.33:66,0,185	0/0:18,1:18:17.73:0,18,397	0/0:20,0:20:51.16:0,51,695	0/1:10,3:13:90.83:91,0,187	0/1:22,0:20:25.91:26,0,356	0/1:19,1:16:37.31:37,0,168	0/1:5,4:9:41.79:107,0,42	0/1:13,2:14:57.81:58,0,120	0/1:8,3:10:97.96:126,0,98	0/1:16,1:16:43.89:44,0,214	0/0:16,0:16:17.38:0,17,277	0/0:17,0:14:39.08:0,39,464	0/1:17,0:11:11.84:12,0,186	0/0:25,0:22:66.21:0,66,916	0/0:13,0:12:24.08:0,24,321	0/0:7,0:5:6.02:0,6,76	0/1:8,1:8:69.28:69,0,157	0/1:9,0:8:3.30:3,0,164	0/1:13,1:10:21.30:38,0,21	0/1:14,0:13:32.61:33,0,221	0/0:17,0:17:48.15:0,48,644	0/0:27,0:25:63.21:0,63,860	0/0:30,0:27:78.19:0,78,1036
chr10	45557656	.	CT	C	930.46	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-1.606;DP=567;FS=2.934;HRun=8;HaplotypeScore=77.5376;InbreedingCoeff=0.9813;MQ=64.61;MQ0=0;MQRankSum=1.374;QD=20.23;ReadPosRankSum=-2.928;VQSLOD=2.7332;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,126,1509	0/0:11,0:11:21.05:0,21,242	0/0:29,0:21:46.35:0,46,442	0/0:18,0:13:12.28:0,12,282	0/0:29,0:28:66.14:0,66,758	0/0:18,0:18:42.13:0,42,504	0/0:19,0:19:54.17:0,54,652	1/1:6,17:23:51.03:480,51,0	0/0:11,0:11:27.07:0,27,314	0/0:21,0:21:60.18:0,60,721	0/0:24,0:24:69.21:0,69,833	0/0:15,0:15:45.08:0,45,516	0/0:14,0:14:42.13:0,42,504	0/0:13,0:13:36.10:0,36,423	0/0:25,0:24:66.05:0,66,749	0/0:16,0:16:42.13:0,42,507	0/0:30,0:30:81.20:0,81,957	0/0:16,0:16:32.86:0,33,370	0/0:15,0:15:30.09:0,30,362	0/0:24,0:24:63.18:0,63,749	0/0:19,0:19:51.14:0,51,603	0/0:15,0:15:45.14:0,45,539	0/0:20,0:20:51.16:0,51,615	0/0:15,0:15:45.10:0,45,527	0/0:17,0:17:48.15:0,48,580	1/1:2,21:23:29.87:572,30,0	0/0:33,0:33:96.29:0,96,1159	0/0:11,0:11:27.08:0,27,324
chr10	45557744	.	C	CGTGT	9085.37	PASS	AB=0.682;AC=48;AF=0.857;AN=56;BaseQRankSum=-4.110;DP=588;FS=12.017;HRun=0;HaplotypeScore=104.7484;InbreedingCoeff=0.5014;MQ=56.76;MQ0=8;MQRankSum=0.777;QD=17.92;ReadPosRankSum=0.751;VQSLOD=3.3368;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:24,12:42:32.58:674,33,0	1/1:9,0:9:3.01:52,3,0	0/0:22,0:9:15.05:0,15,234	0/0:19,0:11:12.03:0,12,169	1/1:11,16:30:29.57:602,30,0	1/1:8,1:15:6.02:104,6,0	1/1:13,1:22:9.03:157,9,0	1/1:26,0:23:10.80:109,11,0	1/1:6,13:20:33.11:775,33,0	0/1:7,8:20:9.71:496,0,10	1/1:13,10:26:14.79:296,15,0	1/1:10,2:13:8.77:157,9,0	1/1:9,9:20:26.69:533,27,0	1/1:7,9:17:18.06:434,18,0	0/1:15,5:21:21.73:383,0,22	1/1:7,11:21:27.73:599,28,0	0/0:36,0:40:50.17:0,50,950	1/1:11,12:24:26.83:590,27,0	1/1:13,0:13:6.02:91,6,0	1/1:12,0:19:3.01:52,3,0	1/1:19,0:19:5.99:66,6,0	1/1:6,13:22:30.10:718,30,0	1/1:10,9:23:21.07:506,21,0	1/1:5,9:15:23.82:518,24,0	1/1:8,14:23:15.58:645,16,0	1/1:13,0:13:11.94:133,12,0	1/1:17,0:17:21.07:343,21,0	1/1:6,0:14:3.01:52,3,0
chr10	45558651	.	G	GT	4739.14	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=3.983;DP=550;FS=6.390;HRun=0;HaplotypeScore=115.7133;InbreedingCoeff=0.9616;MQ=65.97;MQ0=0;MQRankSum=-1.169;QD=28.72;ReadPosRankSum=4.009;VQSLOD=4.8468;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,22:23:54.17:653,54,0	1/1:0,5:5:15.05:180,15,0	0/0:28,0:22:59.09:0,59,712	0/0:25,0:17:38.88:0,39,465	0/0:23,0:23:46.71:0,47,222	1/1:1,18:19:51.15:611,51,0	1/1:2,11:13:1.92:308,2,0	0/0:29,0:29:81.26:0,81,1108	1/1:0,13:13:30.03:350,30,0	0/0:26,0:26:45.83:0,46,321	0/0:24,0:24:44.99:0,45,238	1/1:0,15:15:36.04:412,36,0	1/1:1,12:13:30.09:359,30,0	1/1:0,16:16:42.13:508,42,0	0/0:15,0:15:16.39:0,16,129	0/0:12,0:12:19.49:0,19,119	0/0:22,0:22:60.66:0,61,865	0/0:21,0:21:45.40:0,45,225	0/0:23,0:23:69.19:0,69,901	0/0:30,0:30:90.26:0,90,1228	0/0:20,0:20:57.19:0,57,795	1/1:1,15:16:39.10:448,39,0	1/1:3,13:16:12.66:414,13,0	1/1:0,16:16:42.13:495,42,0	0/0:24,0:24:53.78:0,54,266	0/0:20,0:20:60.20:0,60,832	0/0:26,0:25:78.24:0,78,1063	0/0:17,0:17:51.17:0,51,712
chr10	45558652	.	G	GT	10057.60	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=5.276;DP=556;FS=2.409;HRun=6;HaplotypeScore=99.2762;InbreedingCoeff=0.9970;MQ=65.71;MQ0=0;MQRankSum=-1.511;QD=32.13;ReadPosRankSum=4.961;VQSLOD=4.2505;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:25:57.14:694,57,0	1/1:5,0:5:15.05:187,15,0	0/0:29,0:23:47.19:0,47,405	0/0:25,0:17:34.43:0,34,280	1/1:0,23:23:69.22:868,69,0	1/1:19,0:19:51.16:637,51,0	1/1:13,0:13:27.56:336,28,0	0/0:29,0:29:66.13:0,66,667	1/1:13,0:13:30.05:354,30,0	1/1:3,24:27:69.22:867,69,0	1/1:0,24:24:72.19:888,72,0	1/1:15,0:15:36.08:428,36,0	1/1:12,0:12:30.09:374,30,0	1/1:16,0:16:42.13:524,42,0	1/1:0,14:15:45.09:547,45,0	1/1:1,11:12:24.08:302,24,0	0/0:22,0:22:57.04:0,57,567	1/1:3,19:22:51.16:633,51,0	0/0:24,0:24:59.94:0,60,570	0/0:29,0:29:87.20:0,87,887	0/0:20,0:20:57.13:0,57,580	1/1:16,0:16:39.12:488,39,0	1/1:16,0:16:45:504,45,0	1/1:16,0:16:42.13:520,42,0	1/1:0,24:24:72.23:906,72,0	0/0:21,0:21:48.10:0,48,489	0/0:26,0:25:78.15:0,78,786	0/0:17,0:17:51.12:0,51,520
chr10	45558858	.	G	GTTGTTTTGT	34678.48	PASS	AB=0.972;AC=37;AF=0.661;AN=56;BaseQRankSum=-8.777;DP=688;FS=0.000;HRun=0;HaplotypeScore=153.5807;InbreedingCoeff=0.9175;MQ=76.76;MQ0=0;MQRankSum=-17.773;QD=78.10;ReadPosRankSum=0.741;VQSLOD=4.3202;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,21:29:57.20:2681,57,0	1/1:7,4:12:21.07:897,21,0	0/0:26,0:26:61.01:0,61,1337	0/0:29,0:28:59.68:0,60,1318	1/1:10,30:42:96.29:3672,96,0	1/1:5,20:27:48.16:2231,48,0	1/1:7,13:21:36.12:1605,36,0	0/0:25,0:25:66.22:0,66,1696	1/1:3,14:19:42.14:1967,42,0	1/1:8,15:23:54.18:2289,54,0	1/1:10,9:21:48.12:1868,48,0	1/1:4,14:19:36.12:1667,36,0	1/1:5,10:15:33.11:1543,33,0	1/1:8,18:28:48.16:2143,48,0	1/1:4,22:26:48.16:2205,48,0	1/1:4,15:19:36.12:1639,36,0	0/0:30,0:31:16.60:0,17,2059	1/1:6,12:18:36.12:1639,36,0	0/0:19,0:19:51.17:0,51,1321	0/0:20,0:20:60.18:0,60,1627	0/0:32,0:32:72.25:0,72,2077	1/1:9,9:18:39.13:1622,39,0	1/1:5,12:18:24.08:985,24,0	1/1:6,20:27:42.14:1854,42,0	1/1:5,21:27:45.15:2122,45,0	0/1:34,1:35:48.37:48,0,2367	0/0:41,0:41:99:0,108,3029	0/0:21,0:21:42.12:0,42,1166
chr10	45559536	.	GT	G	3543.82	PASS	AB=1.000;AC=34;AF=0.607;AN=56;BaseQRankSum=12.269;DP=572;FS=10.288;HRun=5;HaplotypeScore=100.6913;InbreedingCoeff=0.6861;MQ=59.15;MQ0=2;MQRankSum=-6.407;QD=9.95;ReadPosRankSum=3.178;VQSLOD=0.7257;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:45,0:45:25.25:68,25,0	0/1:5,0:5:6.07:6,0,14	0/1:21,0:10:9.07:9,0,69	0/0:19,0:12:11.17:0,11,223	1/1:5,10:13:27.07:294,27,0	1/1:16,0:15:4.95:23,5,0	1/1:22,0:21:15.48:41,15,0	0/0:32,0:32:80.80:0,81,1068	1/1:20,0:21:15.29:46,15,0	1/1:6,17:21:63.02:651,63,0	1/1:2,20:20:51.11:536,51,0	0/1:22,0:22:7.81:21,0,8	1/1:15,0:15:1.87:11,2,0	1/1:19,0:19:14.38:40,14,0	1/1:7,9:15:36.56:392,37,0	1/1:2,11:13:39.10:420,39,0	0/0:32,0:32:92.87:0,93,1191	1/1:7,9:16:46.12:463,46,0	0/0:23,0:22:62.89:0,63,790	0/0:21,0:21:63.14:0,63,790	0/0:22,0:22:60.19:0,60,797	0/1:16,0:16:5.40:12,0,5	1/1:16,0:16:6.55:19,7,0	1/1:16,0:16:15.01:40,15,0	1/1:7,9:16:42.09:453,42,0	0/0:32,0:31:84.19:0,84,1112	0/0:19,0:19:53.38:0,53,683	0/0:16,0:16:33.11:0,33,447
chr10	45559538	.	TTTTG	T	6452.62	PASS	AB=1.000;AC=38;AF=0.679;AN=56;BaseQRankSum=13.564;DP=571;FS=9.631;HRun=0;HaplotypeScore=115.9875;InbreedingCoeff=0.8501;MQ=57.63;MQ0=4;MQRankSum=-8.231;QD=17.03;ReadPosRankSum=1.008;VQSLOD=4.0723;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:43,3:46:50.75:437,51,0	1/1:5,0:5:9.44:72,9,0	0/1:20,0:9:2.38:2,0,63	0/1:19,0:12:27.23:27,0,151	1/1:16,0:14:28.64:297,29,0	1/1:12,2:14:23.34:235,23,0	1/1:19,2:20:29.46:278,29,0	0/0:33,0:32:84.06:0,84,1472	1/1:19,1:20:23.99:321,24,0	1/1:25,0:22:60.25:706,60,0	1/1:21,0:19:50.41:598,50,0	1/1:19,1:20:22.91:161,23,0	1/1:14,1:15:35.74:350,36,0	1/1:19,1:20:39.71:369,40,0	1/1:17,0:15:34.76:383,35,0	1/1:14,0:13:38.20:574,38,0	0/0:31,0:31:92.99:0,93,1825	1/1:19,0:18:42.67:478,43,0	0/0:22,0:21:56.90:0,57,962	0/0:22,0:21:60.13:0,60,1140	0/0:21,0:21:60.07:0,60,1070	1/1:16,0:16:9.48:141,9,0	1/1:16,0:16:20.59:215,21,0	1/1:16,0:16:38.28:274,38,0	1/1:19,0:18:43.23:535,43,0	0/0:30,0:30:84.20:0,84,1484	0/0:19,0:19:57.10:0,57,963	0/0:14,0:14:33.01:0,33,628
chr10	45559539	.	TTTG	T	7184.25	PASS	AB=1.000;AC=38;AF=0.679;AN=56;BaseQRankSum=13.430;DP=566;FS=6.330;HRun=0;HaplotypeScore=104.3396;InbreedingCoeff=0.8359;MQ=57.50;MQ0=5;MQRankSum=-8.544;QD=19.16;ReadPosRankSum=0.571;VQSLOD=4.0812;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:9,37:46:56.75:732,57,0	1/1:1,4:5:9.92:152,10,0	0/1:20,0:9:21.34:21,0,49	0/1:19,0:12:10.59:11,0,139	1/1:15,0:13:28.59:205,29,0	1/1:5,8:12:24.08:354,24,0	1/1:3,17:19:30.10:449,30,0	0/0:33,0:31:83.93:0,84,1206	1/1:15,5:20:40.40:518,40,0	1/1:25,0:22:60:488,60,0	1/1:21,0:19:50.13:405,50,0	1/1:6,14:20:26.87:347,27,0	1/1:10,5:15:36.05:394,36,0	1/1:13,6:19:50.19:578,50,0	1/1:18,0:16:37.18:295,37,0	1/1:14,0:13:38.16:362,38,0	0/0:31,0:31:90.66:0,91,1486	1/1:19,0:18:42.88:339,43,0	0/0:22,0:21:54.06:0,54,798	0/0:22,0:21:60.11:0,60,934	0/0:20,0:20:60.06:0,60,876	1/1:1,15:16:30.34:322,30,0	1/1:10,7:17:37.34:378,37,0	1/1:9,7:16:41.91:483,42,0	1/1:17,0:16:43.13:350,43,0	0/0:30,0:30:84.13:0,84,1223	0/0:20,0:20:60.07:0,60,841	0/0:13,0:13:33.01:0,33,526
chr10	45559540	.	TTG	T	5744.65	PASS	AB=1.000;AC=38;AF=0.679;AN=56;BaseQRankSum=13.690;DP=563;FS=8.565;HRun=0;HaplotypeScore=100.3168;InbreedingCoeff=0.8492;MQ=57.49;MQ0=5;MQRankSum=-8.243;QD=15.48;ReadPosRankSum=1.400;VQSLOD=4.2959;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:42,4:46:56.90:554,57,0	1/1:5,0:5:10.27:99,10,0	0/1:20,0:9:8.34:8,0,36	0/1:19,0:12:9.12:9,0,127	1/1:15,0:13:27.94:169,28,0	1/1:10,3:12:23.95:235,24,0	1/1:19,1:19:30.01:294,30,0	0/0:33,0:31:82.81:0,83,959	1/1:18,1:19:47.24:445,47,0	1/1:25,0:22:56.79:388,57,0	1/1:21,0:19:49.89:347,50,0	1/1:17,3:20:27.03:290,27,0	1/1:15,0:15:36.03:330,36,0	1/1:19,0:19:50.94:469,51,0	1/1:16,0:14:37.36:240,37,0	1/1:14,0:13:38.03:298,38,0	0/0:31,0:31:84.17:0,84,1178	1/1:20,0:19:36.10:274,36,0	0/0:22,0:21:45.21:0,45,626	0/0:22,0:21:59.89:0,60,732	0/0:21,0:21:62.81:0,63,714	1/1:15,0:15:32.05:253,32,0	1/1:16,0:16:38.83:330,39,0	1/1:14,2:16:41.99:430,42,0	1/1:17,0:16:41.85:281,42,0	0/0:29,0:29:83.63:0,84,994	0/0:23,0:23:68.62:0,69,747	0/0:11,0:11:33.05:0,33,427
chr10	45559541	.	TG	T	4895.98	PASS	AB=0.975;AC=38;AF=0.679;AN=56;BaseQRankSum=14.072;DP=560;FS=8.711;HRun=1;HaplotypeScore=95.4028;InbreedingCoeff=0.8718;MQ=57.41;MQ0=6;MQRankSum=-7.927;QD=13.23;ReadPosRankSum=1.304;VQSLOD=3.2689;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:46,0:46:56.80:464,57,0	1/1:4,0:4:10.24:81,10,0	0/1:20,0:9:1.91:2,0,39	0/1:18,1:12:8.95:9,0,116	1/1:15,0:13:27.21:145,27,0	1/1:13,0:12:23.67:190,24,0	1/1:20,0:19:29.94:248,30,0	0/0:33,0:31:75.55:0,76,730	1/1:18,1:19:47.81:406,48,0	1/1:25,0:22:51.36:311,51,0	1/1:21,0:19:49.26:292,49,0	1/1:19,1:19:26.95:225,27,0	1/1:15,0:15:35.86:298,36,0	1/1:18,2:20:50.88:425,51,0	1/1:16,0:14:37:202,37,0	1/1:14,0:13:37.65:235,38,0	0/0:31,0:31:75.37:0,75,895	1/1:18,1:18:41.03:238,41,0	0/0:21,0:20:50.37:0,50,495	0/0:21,0:20:57.53:0,58,538	0/0:21,0:21:59.84:0,60,541	1/1:15,0:15:31.62:228,32,0	1/1:14,2:16:38.81:309,39,0	1/1:16,0:16:41.46:358,41,0	1/1:17,0:16:39.64:229,40,0	0/0:29,0:29:77.25:0,77,792	0/0:23,0:23:57.94:0,58,593	0/0:11,0:11:33.03:0,33,336
chr10	45559542	.	GTTT	G	3899.45	PASS	AB=0.974;AC=33;AF=0.589;AN=56;BaseQRankSum=13.253;DP=569;FS=7.690;HRun=12;HaplotypeScore=116.8879;InbreedingCoeff=0.4447;MQ=57.14;MQ0=6;MQRankSum=-6.863;QD=10.40;ReadPosRankSum=4.146;VQSLOD=0.6408;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:47,0:47:4.15:273,4,0	1/1:4,0:4:6.63:77,7,0	0/1:17,1:9:15.67:31,0,16	0/1:17,1:12:10.08:10,0,47	1/1:5,10:13:14.97:167,15,0	1/1:14,0:13:6.82:151,7,0	1/1:20,0:19:29.59:228,30,0	0/0:34,0:32:72.14:0,72,1207	0/1:20,0:20:46.13:137,0,46	1/1:11,13:22:41.95:464,42,0	1/1:9,11:19:32.81:343,33,0	0/1:20,0:19:3:146,0,3	1/1:14,0:14:14.44:106,14,0	0/1:21,0:21:11.56:175,0,12	1/1:8,8:14:23.33:241,23,0	1/1:3,11:13:33.10:395,33,0	0/0:32,0:33:81.71:0,82,1466	1/1:10,8:18:26.43:297,26,0	0/0:18,0:20:42.06:0,42,734	0/0:19,0:21:54.03:0,54,938	0/0:17,0:20:48.14:0,48,848	0/1:17,0:17:37.39:93,0,37	0/1:16,0:16:14.14:101,0,14	1/1:16,0:16:0.99:130,1,0	1/1:7,9:16:29.95:334,30,0	0/0:26,0:28:60.10:0,60,1010	0/0:20,0:24:57.15:0,57,948	0/0:12,0:12:27.08:0,27,498
chr10	45559545	.	T	TTG	250.38	PASS	AB=0.880;AC=9;AF=0.161;AN=56;BaseQRankSum=8.626;DP=562;FS=6.318;HRun=0;HaplotypeScore=126.0642;InbreedingCoeff=0.0571;MQ=55.55;MQ0=6;MQRankSum=-5.561;QD=1.73;ReadPosRankSum=5.527;VQSLOD=1.5495;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:38.20:0,38,404	0/0:4,0:4:10.56:0,11,93	0/0:20,0:9:8.68:0,9,59	0/1:15,0:8:19.06:19,0,72	0/1:12,2:13:42.25:42,0,70	0/0:14,0:13:19.19:0,19,175	0/0:20,0:19:32.12:0,32,250	0/0:33,0:31:86.98:0,87,994	0/0:20,0:20:25.82:0,26,331	0/1:23,5:25:99:112,0,164	0/1:20,0:18:43.52:44,0,45	0/0:21,0:20:25.67:0,26,219	0/0:15,0:15:26.04:0,26,228	0/0:22,0:22:48.25:0,48,392	0/1:12,3:13:44.85:45,0,84	1/1:11,3:13:15.42:39,15,0	0/0:31,0:31:85.62:0,86,1082	0/1:14,6:20:53.98:54,0,98	0/0:19,0:18:45.79:0,46,548	0/0:22,0:21:59.63:0,60,685	0/0:19,0:19:47.34:0,47,664	0/0:17,0:17:32.66:0,33,239	0/0:16,0:16:32.22:0,32,261	0/0:18,0:18:39.49:0,39,380	0/1:15,2:16:41.36:41,0,110	0/0:26,0:26:72.13:0,72,892	0/0:21,0:21:59.69:0,60,782	0/0:12,0:12:33.07:0,33,441
chr10	45560050	.	TCTAC	T	16707.65	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=15.636;DP=763;FS=7.052;HRun=0;HaplotypeScore=141.8092;InbreedingCoeff=0.9911;MQ=68.67;MQ0=4;MQRankSum=-6.610;QD=34.45;ReadPosRankSum=5.582;VQSLOD=4.6433;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,37:39:66.14:1216,66,0	1/1:2,4:6:9.03:174,9,0	0/0:31,0:26:58.74:0,59,1229	0/0:33,0:29:54.13:0,54,1118	1/1:0,28:28:62.39:967,62,0	1/1:1,23:24:42.10:772,42,0	1/1:0,28:28:53.95:1036,54,0	0/0:36,0:35:87.22:0,87,1605	1/1:0,38:38:78.27:1444,78,0	1/1:0,22:21:63.19:1136,63,0	1/1:0,19:19:33.11:615,33,0	1/1:0,23:23:35.79:675,36,0	1/1:0,24:24:60.20:1125,60,0	1/1:1,29:30:57.19:1077,57,0	1/1:2,32:34:65.99:1246,66,0	1/1:2,36:37:69.24:1326,69,0	0/0:32,0:32:96.30:0,96,2463	1/1:1,20:20:36.10:660,36,0	0/0:27,0:27:78.14:0,78,1726	0/0:27,0:27:81.10:0,81,1984	0/0:27,0:27:78.17:0,78,1815	1/1:0,33:33:63.12:1122,63,0	1/1:3,17:20:27.09:500,27,0	1/1:1,37:36:54.14:985,54,0	1/1:1,19:20:36.12:631,36,0	0/0:31,1:32:31.87:0,32,2093	0/0:17,0:17:48.15:0,48,1168	0/0:16,0:16:45.14:0,45,1081
chr10	45560149	.	C	CTCTG	8138.34	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=9.037;DP=861;FS=4.868;HRun=0;HaplotypeScore=274.9522;InbreedingCoeff=0.9573;MQ=65.65;MQ0=16;MQRankSum=-4.698;QD=17.58;ReadPosRankSum=1.445;VQSLOD=4.0012;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:37,0:35:50.25:387,50,0	1/1:10,0:10:20.88:154,21,0	0/0:63,0:36:42.07:0,42,700	0/0:94,0:54:14.89:0,15,836	1/1:25,0:25:23.44:471,23,0	1/1:22,1:23:25.77:693,26,0	1/1:39,1:39:42:608,42,0	0/0:35,0:35:99:0,99,1418	1/1:36,0:36:56.02:376,56,0	1/1:42,0:42:99:1705,110,0	1/1:23,0:23:26.73:498,27,0	1/1:26,0:24:23:158,23,0	1/1:15,0:15:13.93:111,14,0	1/1:27,0:26:12.90:174,13,0	1/1:24,1:25:36.09:601,36,0	1/1:35,0:35:55.52:913,56,0	0/0:31,0:31:89.95:0,90,1449	1/1:15,1:15:10.04:412,10,0	0/0:27,0:26:60.04:0,60,798	0/0:16,0:16:48.14:0,48,846	0/0:59,0:59:99:0,167,2695	1/1:20,0:20:17.09:117,17,0	1/1:15,0:14:11.63:91,12,0	1/1:34,0:34:39.98:292,40,0	1/1:14,0:14:18.06:376,18,0	0/0:25,0:25:5.52:0,6,1086	0/0:24,0:24:69.19:0,69,1164	0/0:24,0:23:66.20:0,66,1189
chr10	45560151	.	C	CTG	6959.66	PASS	AB=1.000;AC=35;AF=0.625;AN=56;BaseQRankSum=5.846;DP=870;FS=6.615;HRun=0;HaplotypeScore=266.6027;InbreedingCoeff=0.9169;MQ=64.08;MQ0=16;MQRankSum=-5.033;QD=14.71;ReadPosRankSum=1.886;VQSLOD=3.9458;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:18,20:37:50.97:715,51,0	1/1:5,7:12:23.24:373,23,0	0/0:61,0:34:58.01:0,58,715	0/0:89,0:50:55.86:0,56,802	1/1:26,0:26:23.74:223,24,0	1/1:23,0:23:8.89:228,9,0	1/1:39,0:38:39.57:298,40,0	0/0:34,0:34:99:0,102,1299	1/1:11,25:36:60.23:957,60,0	1/1:41,1:42:76.29:571,76,0	1/1:22,0:22:26.83:202,27,0	1/1:8,19:25:35.11:469,35,0	1/1:4,11:15:26.63:345,27,0	1/1:9,18:26:40.20:582,40,0	1/1:25,0:25:30.48:198,30,0	1/1:36,0:36:32.29:351,32,0	0/0:32,0:32:90.11:0,90,1207	0/1:16,0:15:7.96:111,0,8	0/0:28,0:27:71.41:0,71,847	0/0:16,0:16:48.14:0,48,691	0/0:59,0:59:99:0,171,2317	1/1:5,15:20:18.06:347,18,0	1/1:6,10:15:11.92:191,12,0	1/1:17,19:36:44.16:682,44,0	1/1:16,0:16:16.01:114,16,0	0/0:27,0:27:60.64:0,61,991	0/0:26,0:26:72.18:0,72,996	0/0:24,0:23:69.20:0,69,1003
chr10	45560161	.	CTG	C	4960.62	PASS	AB=0.982;AC=27;AF=0.482;AN=56;BaseQRankSum=14.108;DP=832;FS=1.538;HRun=0;HaplotypeScore=265.4264;InbreedingCoeff=0.3894;MQ=59.94;MQ0=14;MQRankSum=-3.852;QD=10.69;ReadPosRankSum=-0.824;VQSLOD=4.0330;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:33,1:32:47.83:48,0,121	0/1:12,1:13:32.40:56,0,32	0/0:44,2:21:23.94:0,24,425	0/0:71,0:40:12.95:0,13,575	1/1:9,16:25:20.35:240,20,0	1/1:6,17:23:41.94:486,42,0	1/1:15,19:33:20.39:299,20,0	0/0:31,0:31:86.86:0,87,1319	0/1:33,1:34:99:144,0,107	1/1:18,28:46:99:1406,105,0	1/1:10,13:23:18.06:260,18,0	0/1:26,0:24:51.72:109,0,52	0/1:11,0:11:28.30:44,0,28	0/1:29,1:29:15.60:63,0,16	1/1:10,17:27:38.71:486,39,0	1/1:8,23:31:53.87:676,54,0	0/0:29,0:29:63.48:0,63,1316	1/1:10,4:13:17.87:268,18,0	0/0:28,0:28:76.54:0,77,908	0/0:19,0:19:56.16:0,56,918	0/0:61,0:61:99:0,139,2698	0/1:22,0:22:44.92:45,0,67	0/1:18,0:17:0.01:5,0,0	0/1:35,0:35:48.29:48,0,135	1/1:6,12:18:23.52:276,24,0	0/0:31,1:32:14.54:0,15,1282	0/0:24,0:24:72.14:0,72,1178	0/0:25,0:24:72.08:0,72,1282
chr10	45560175	.	GTC	G	4960.40	PASS	AB=0.772;AC=37;AF=0.661;AN=56;BaseQRankSum=14.771;DP=802;FS=1.781;HRun=0;HaplotypeScore=257.7622;InbreedingCoeff=0.6744;MQ=53.12;MQ0=5;MQRankSum=-6.995;QD=8.42;ReadPosRankSum=-0.116;VQSLOD=4.4811;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:20,6:32:18.50:216,18,0	1/1:5,3:10:8.35:107,8,0	0/0:26,0:17:24.27:0,24,255	0/0:48,0:27:18.89:0,19,197	1/1:7,19:28:11.10:119,11,0	1/1:8,18:26:27.08:321,27,0	1/1:10,8:37:5.67:72,6,0	0/0:27,1:28:17.74:0,18,746	1/1:10,9:34:35.76:411,36,0	1/1:11,19:51:89.94:1065,90,0	0/1:8,6:23:0:1,0,0	1/1:5,8:24:29.68:357,30,0	1/1:6,3:15:27.07:311,27,0	1/1:4,1:30:18.06:217,18,0	1/1:8,19:28:29.34:330,29,0	1/1:7,25:32:50.96:607,51,0	0/0:26,0:26:69.24:0,69,1105	1/1:7,3:10:15.04:178,15,0	0/1:28,3:32:43.01:43,0,775	0/0:21,1:22:17.81:0,18,745	0/1:49,9:58:99:147,0,1724	1/1:8,8:22:12:137,12,0	0/1:3,2:18:0.02:0,0,0	1/1:18,7:32:12:140,12,0	1/1:6,12:18:15.03:178,15,0	0/0:36,3:40:9.37:0,9,1259	0/0:22,0:22:57.14:0,57,865	0/1:24,2:26:3.53:4,0,931
chr10	45560179	.	C	CTG	433.20	PASS	AB=0.972;AC=25;AF=0.446;AN=56;BaseQRankSum=16.304;DP=806;FS=1.340;HRun=0;HaplotypeScore=276.5799;InbreedingCoeff=0.3587;MQ=52.69;MQ0=3;MQRankSum=-6.952;QD=0.98;ReadPosRankSum=1.787;VQSLOD=2.4065;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:33,2:34:8.35:8,0,104	0/1:10,1:11:15.42:15,0,27	0/0:30,0:20:20.22:0,20,380	0/0:43,0:25:41.46:0,41,496	1/1:30,0:30:14.66:60,15,0	1/1:25,0:25:9.75:77,10,0	1/1:36,0:35:6.80:29,7,0	0/0:30,0:30:86.85:0,87,1043	0/0:37,0:37:5.13:0,5,134	0/1:48,0:48:35.87:108,0,36	1/1:22,0:22:2.68:11,3,0	1/1:23,0:23:6.43:47,6,0	0/1:16,0:16:30.10:30,0,31	0/1:30,0:30:5.60:6,0,16	1/1:28,0:28:14.73:46,15,0	1/1:34,0:34:18.78:83,19,0	0/0:26,0:26:75.22:0,75,1099	0/1:13,0:12:7.47:21,0,7	0/0:30,0:30:27.58:0,28,882	0/0:23,0:23:68.87:0,69,885	0/0:59,0:59:99:0,150,2085	0/1:23,0:23:15.02:15,0,32	0/1:18,0:18:0.06:0,0,0	0/1:26,3:30:8.48:8,0,56	1/1:19,0:19:14.45:53,14,0	0/0:37,0:37:79.98:0,80,1377	0/0:23,0:23:66.14:0,66,934	0/0:27,0:27:80.69:0,81,1031
chr10	45560183	.	C	CTG	776.64	PASS	AB=0.994;AC=18;AF=0.321;AN=56;BaseQRankSum=10.364;DP=794;FS=4.124;HRun=0;HaplotypeScore=269.6029;InbreedingCoeff=0.1906;MQ=54.58;MQ0=2;MQRankSum=-1.335;QD=2.18;ReadPosRankSum=-2.219;VQSLOD=2.1750;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:29,2:30:40.84:78,0,41	0/1:11,0:11:13.64:14,0,34	0/0:32,0:23:48.44:0,48,505	0/0:38,0:24:52.61:0,53,518	0/1:29,0:29:8.35:8,0,31	0/1:26,0:26:15.02:25,0,15	0/0:34,0:33:3.61:0,4,20	0/0:30,0:30:78.07:0,78,973	0/1:38,0:38:31.34:78,0,31	0/1:46,0:46:32.05:211,0,32	0/0:18,0:18:2.52:0,3,24	1/1:23,0:23:10.67:42,11,0	1/1:17,0:17:18.42:131,18,0	0/0:30,0:30:2.81:0,3,27	0/1:25,0:25:5.91:60,0,6	0/1:36,0:36:7.15:70,0,7	0/0:26,0:26:72.23:0,72,1075	0/1:13,0:12:9.13:64,0,9	0/0:32,0:32:56.04:0,56,933	0/0:23,0:23:69.09:0,69,883	0/0:57,0:57:99:0,144,2053	1/1:23,0:23:10.48:47,10,0	0/1:18,0:18:0.06:0,0,0	0/0:26,3:29:0.87:0,1,77	1/1:21,0:21:15.49:117,15,0	0/0:37,0:37:99:0,108,1456	0/0:23,0:23:66.10:0,66,910	0/0:28,0:28:80.90:0,81,1038
chr10	45560563	.	CA	C	2036.85	PASS	AB=0.966;AC=27;AF=0.482;AN=56;BaseQRankSum=16.306;DP=558;FS=8.271;HRun=1;HaplotypeScore=79.8936;InbreedingCoeff=0.3969;MQ=78.41;MQ0=0;MQRankSum=-1.068;QD=5.61;ReadPosRankSum=6.848;VQSLOD=0.2174;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:38,0:38:22.80:196,23,0	1/1:6,0:6:10.89:48,11,0	0/0:13,0:13:35.99:0,36,452	0/0:13,1:14:33.09:0,33,453	1/1:8,0:8:11.31:37,11,0	0/1:14,0:14:41.19:52,0,41	0/1:27,0:27:37.42:112,0,37	0/0:18,0:18:54.15:0,54,730	1/1:25,1:26:34.20:182,34,0	0/1:16,0:16:28.57:29,0,50	1/1:12,0:12:24.41:109,24,0	0/1:30,2:32:19.06:235,0,19	1/1:25,0:25:60.66:231,61,0	1/1:24,3:27:36.47:247,36,0	0/1:25,1:26:60.32:116,0,60	1/1:16,1:17:13.68:108,14,0	0/0:31,0:31:93.23:0,93,1261	1/1:22,0:22:21.46:109,21,0	0/0:21,0:21:60.17:0,60,806	0/0:15,0:15:45.14:0,45,634	0/0:45,0:45:99:0,132,1874	0/1:11,3:14:8.15:169,0,8	0/1:8,0:8:2.12:53,0,2	0/1:29,1:30:4.78:150,0,5	0/1:15,0:15:32.39:58,0,32	0/0:19,0:19:57.18:0,57,811	0/0:13,0:13:32.64:0,33,479	0/0:6,0:6:18.06:0,18,262
chr10	45560564	.	AC	A	8896.83	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=10.928;DP=554;FS=3.597;HRun=7;HaplotypeScore=56.9857;InbreedingCoeff=0.9908;MQ=77.20;MQ0=0;MQRankSum=-2.053;QD=24.58;ReadPosRankSum=3.400;VQSLOD=5.3981;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,36:38:81.18:825,81,0	1/1:0,6:6:12.03:122,12,0	0/0:12,0:12:26.76:0,27,313	0/0:13,0:13:27.05:0,27,313	1/1:0,7:7:15.03:153,15,0	1/1:2,11:13:30.07:306,30,0	1/1:4,23:27:63.14:642,63,0	0/0:19,0:19:48.15:0,48,590	1/1:2,24:26:69.16:703,69,0	1/1:3,13:16:36.04:352,36,0	1/1:1,11:12:30.07:304,30,0	1/1:7,25:32:81.18:824,81,0	1/1:0,25:25:75.17:765,75,0	1/1:4,22:26:66.14:669,66,0	1/1:9,18:27:60.12:611,60,0	1/1:2,15:17:45.10:459,45,0	0/0:30,0:30:84.25:0,84,1041	1/1:1,21:22:54.12:551,54,0	0/0:21,0:21:51.14:0,51,623	0/0:15,0:15:42.12:0,42,516	0/0:44,0:44:99:0,132,1604	1/1:6,8:14:33.03:324,33,0	1/1:3,6:9:21.93:215,22,0	1/1:4,26:30:72.16:734,72,0	1/1:4,11:15:33.07:336,33,0	0/0:19,0:19:54.16:0,54,666	0/0:13,0:13:35.62:0,36,438	0/0:6,0:6:18.06:0,18,226
chr10	45560571	.	CA	C	2014.70	PASS	AB=0.988;AC=30;AF=0.536;AN=56;BaseQRankSum=16.342;DP=554;FS=5.632;HRun=1;HaplotypeScore=81.0775;InbreedingCoeff=0.5357;MQ=75.95;MQ0=0;MQRankSum=-0.631;QD=5.61;ReadPosRankSum=6.638;VQSLOD=0.7181;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:37,0:37:39.52:180,40,0	1/1:7,0:7:10.78:45,11,0	0/0:11,0:11:27.12:0,27,357	0/0:14,0:14:35.28:0,35,381	0/1:8,0:8:4.83:22,0,5	0/1:14,0:14:36.65:37,0,57	0/1:27,0:27:26.11:102,0,26	0/0:18,0:18:51.10:0,51,644	1/1:25,0:25:54.69:193,55,0	0/1:15,0:15:31.06:31,0,61	1/1:12,0:12:24.34:96,24,0	1/1:28,1:29:42.75:220,43,0	1/1:26,0:26:44.06:177,44,0	1/1:26,1:27:59.16:347,59,0	1/1:21,2:23:11.38:161,11,0	1/1:17,0:17:32.24:97,32,0	0/0:30,0:30:87.07:0,87,1076	1/1:23,0:23:0.26:79,0,0	0/0:20,0:19:60.07:0,60,723	0/0:15,0:15:44.89:0,45,547	0/0:48,0:48:99:0,141,1808	0/1:13,0:13:14.89:67,0,15	0/1:12,1:13:30.45:110,0,30	1/1:29,0:29:54.60:174,55,0	1/1:13,1:14:8.83:85,9,0	0/0:20,0:20:51.22:0,51,712	0/0:13,0:13:36.59:0,37,486	0/0:6,0:6:18.06:0,18,244
chr10	45561934	.	TA	T	3736.62	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-10.583;DP=656;FS=0.000;HRun=11;HaplotypeScore=149.6582;InbreedingCoeff=0.9877;MQ=67.70;MQ0=1;MQRankSum=7.671;QD=19.67;ReadPosRankSum=6.425;VQSLOD=2.4569;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:26:48.90:0,49,267	0/0:2,0:5:14.52:0,15,84	0/0:17,0:16:32.72:0,33,307	0/0:13,0:13:10.35:0,10,104	0/0:11,0:30:69.72:0,70,401	0/0:9,0:21:37.16:0,37,200	0/0:3,0:14:25.81:0,26,138	1/1:7,18:25:51.39:420,51,0	0/0:19,0:26:43.54:0,44,261	0/0:7,0:21:45.96:0,46,255	0/0:8,0:26:51.21:0,51,270	0/0:17,0:27:58.80:0,59,315	0/0:7,0:11:31.60:0,32,170	0/0:16,0:26:41.33:0,41,219	0/0:8,0:27:37.25:0,37,203	0/0:9,0:30:63.03:0,63,336	0/0:32,1:33:59.50:0,60,815	0/0:4,0:19:34.88:0,35,186	1/1:4,14:19:43.93:345,44,0	1/1:3,26:30:47.26:566,47,0	1/1:3,24:27:65.92:542,66,0	0/0:18,0:35:73.77:0,74,401	0/0:12,0:20:30.64:0,31,163	0/0:6,0:15:22.97:0,23,125	0/0:8,0:24:37.40:0,37,214	1/1:4,32:36:95.87:788,96,0	1/1:2,26:28:37.27:510,37,0	1/1:1,24:25:68.92:566,69,0
chr10	45562497	.	GTTGTTTTGTTTTGTT	G	8840.20	PASS	AB=0.640;AC=31;AF=0.574;AN=54;BaseQRankSum=12.649;DP=702;FS=11.341;HRun=0;HaplotypeScore=320.4183;InbreedingCoeff=0.6912;MQ=61.85;MQ0=5;MQRankSum=-11.284;QD=21.56;ReadPosRankSum=3.451;VQSLOD=2.0369;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:15,22:37:18.05:516,18,0	./.	0/0:30,0:24:12.04:0,12,404	0/0:33,0:29:6.96:0,7,219	1/1:15,0:27:7.97:416,8,0	0/1:8,0:23:22.51:23,0,143	0/0:12,0:22:9.26:0,9,339	0/0:21,0:28:26.91:0,27,364	1/1:14,11:25:27.09:1121,27,0	1/1:14,0:31:17.84:1041,18,0	1/1:6,0:22:11.39:524,11,0	1/1:5,14:19:27.09:1120,27,0	1/1:14,8:22:6.29:250,6,0	1/1:3,9:12:12.04:498,12,0	1/1:13,0:24:24.08:836,24,0	1/1:7,0:21:21.54:734,22,0	0/0:35,0:35:75.26:0,75,4788	1/1:15,0:29:9.03:314,9,0	0/0:24,0:20:15.05:0,15,940	0/0:26,0:27:36.12:0,36,1965	0/0:31,0:31:48.16:0,48,3143	1/1:11,13:24:15.05:464,15,0	1/1:15,6:21:12.04:260,12,0	0/1:16,13:28:99:390,0,235	1/1:9,0:19:10.59:319,11,0	0/1:10,0:25:13.44:13,0,361	0/0:31,0:31:57.18:0,57,3887	0/0:28,0:28:54.19:0,54,3203
chr10	45562863	.	G	GTGT	24823.40	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-7.168;DP=658;FS=0.968;HRun=0;HaplotypeScore=104.8531;InbreedingCoeff=0.9875;MQ=77.97;MQ0=0;MQRankSum=-4.693;QD=60.25;ReadPosRankSum=4.235;VQSLOD=6.4352;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,35:38:78.27:1919,78,0	1/1:0,10:11:30.10:739,30,0	0/0:29,0:29:84.29:0,84,1521	0/0:19,0:19:51.17:0,51,931	1/1:1,27:28:63.22:1550,63,0	1/1:2,19:23:51.18:1248,51,0	1/1:5,11:16:33.11:795,33,0	0/0:35,0:35:99:0,105,1917	1/1:1,24:27:66.23:1624,66,0	1/1:6,18:26:75.26:1805,75,0	1/1:1,17:20:45.15:1108,45,0	1/1:2,26:29:75.26:1846,75,0	1/1:1,22:24:66.23:1626,66,0	1/1:2,25:27:78.27:1920,78,0	1/1:1,18:20:51.18:1256,51,0	1/1:2,30:33:84.29:2070,84,0	0/0:26,0:26:78.27:0,78,1442	1/1:2,10:12:30.10:739,30,0	0/0:19,0:19:54.17:0,54,935	0/0:24,0:24:72.25:0,72,1342	0/0:35,0:35:99:0,105,1957	1/1:0,22:23:57.20:1403,57,0	1/1:2,23:26:57.19:1403,57,0	1/1:0,13:14:36.12:886,36,0	1/1:3,12:15:36.12:886,36,0	0/0:27,1:28:7.30:0,7,1371	0/0:18,0:18:51.14:0,51,886	0/0:13,0:13:39.13:0,39,727
chr10	45564428	.	CTTTT	C	5121.68	PASS	AB=0.618;AC=31;AF=0.554;AN=56;BaseQRankSum=1.565;DP=664;FS=0.000;HRun=14;HaplotypeScore=133.2418;InbreedingCoeff=0.5086;MQ=67.08;MQ0=18;MQRankSum=-3.651;QD=12.14;ReadPosRankSum=6.058;VQSLOD=1.3000;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,18:21:42.04:570,42,0	1/1:1,5:6:8.99:127,9,0	0/0:56,0:18:9.58:0,10,105	0/1:65,0:21:11.33:11,0,144	0/1:8,0:29:13.24:13,0,51	1/1:2,24:26:60.16:849,60,0	1/1:1,7:8:21:274,21,0	0/0:8,0:30:56.75:0,57,344	1/1:2,14:16:26.83:382,27,0	0/1:3,0:22:7.60:25,0,8	0/1:4,1:21:27.87:53,0,28	0/1:3,0:14:10.74:14,0,11	1/1:5,17:22:39.09:552,39,0	1/1:4,11:15:21.20:296,21,0	0/1:4,1:26:0.84:62,0,1	0/1:5,1:20:24.25:48,0,24	0/0:20,0:20:51.18:0,51,1197	1/1:7,1:18:2.23:70,2,0	0/0:19,0:26:31.13:0,31,320	0/0:6,0:26:51.31:0,51,328	0/0:3,0:11:29.47:0,29,226	1/1:5,17:21:54.11:724,54,0	1/1:5,18:23:18.91:568,19,0	1/1:3,16:18:30.08:425,30,0	1/1:6,0:27:23.56:58,24,0	0/0:9,0:26:61.89:0,62,572	0/0:10,0:35:76.29:0,76,551	0/0:2,0:10:29.42:0,29,224
chr10	45565878	.	C	CTCTT	18184.95	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=5.250;DP=686;FS=0.733;HRun=0;HaplotypeScore=118.5469;InbreedingCoeff=0.9985;MQ=74.19;MQ0=1;MQRankSum=-3.774;QD=40.14;ReadPosRankSum=3.292;VQSLOD=5.0780;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:56,0:56:99:2207,117,0	1/1:11,0:11:30.10:578,30,0	0/0:31,0:28:57.13:0,57,868	0/0:24,0:22:30.72:0,31,445	1/1:4,15:19:42.06:936,42,0	1/1:22,0:22:51.17:941,51,0	1/1:33,0:33:45.15:845,45,0	0/0:28,0:28:60.19:0,60,992	1/1:28,0:28:72.25:1360,72,0	1/1:4,12:17:42.12:899,42,0	1/1:5,12:17:39.09:897,39,0	1/1:32,0:32:63.21:1183,63,0	1/1:16,0:16:27.09:525,27,0	1/1:21,0:21:39.13:743,39,0	1/1:5,18:24:42.14:1046,42,0	1/1:6,8:14:27.09:627,27,0	0/0:21,0:21:48.16:0,48,807	1/1:8,24:36:64.38:1436,64,0	0/0:26,0:26:48.16:0,48,814	0/0:12,0:12:24.05:0,24,355	0/0:26,0:26:57.18:0,57,937	1/1:26,0:26:48.16:904,48,0	1/1:26,0:25:51.17:986,51,0	1/1:33,0:33:60.21:1103,60,0	1/1:6,14:21:39.13:970,39,0	0/0:26,0:25:69.23:0,69,1147	0/0:25,0:25:63.22:0,63,1068	0/0:14,0:14:20.43:0,20,313
chr10	45565885	.	T	TTTCC	20342.94	PASS	AB=1.000;AC=30;AF=0.536;AN=56;BaseQRankSum=-6.026;DP=688;FS=0.000;HRun=0;HaplotypeScore=105.2836;InbreedingCoeff=0.5671;MQ=72.74;MQ0=1;MQRankSum=-4.446;QD=43.75;ReadPosRankSum=7.952;VQSLOD=4.9185;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,52:58:99:3165,120,0	1/1:0,10:12:30.10:801,30,0	0/0:32,0:29:74.90:0,75,1195	0/0:20,0:18:33.49:0,33,611	0/1:19,0:19:22.79:558,0,23	1/1:2,20:22:51.18:1357,51,0	1/1:2,31:34:45.15:1214,45,0	0/0:28,0:28:69.21:0,69,1216	1/1:1,27:29:72.25:1941,72,0	1/1:16,0:15:12.74:480,13,0	0/1:17,0:17:22.63:515,0,23	1/1:2,28:30:66.20:1715,66,0	1/1:0,17:17:27.09:727,27,0	1/1:1,20:24:39.13:1050,39,0	0/1:25,0:25:71.55:640,0,72	0/1:15,0:15:99:357,0,103	0/0:22,0:22:60.13:0,60,1006	0/1:35,0:35:20.59:815,0,21	0/0:23,0:23:63.16:0,63,1042	0/0:13,0:13:33.08:0,33,520	0/0:24,0:24:72.18:0,72,1201	1/1:0,29:30:62.83:1380,63,0	1/1:1,25:27:57.06:1395,57,0	1/1:1,33:35:60.21:1618,60,0	0/1:19,0:19:20.55:615,0,21	0/0:28,0:27:77.28:0,77,1367	0/0:23,0:23:69.21:0,69,1246	0/0:10,0:10:24.03:0,24,387
chr10	45567626	.	A	AG	1290.70	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-7.702;DP=574;FS=0.000;HRun=2;HaplotypeScore=68.3831;InbreedingCoeff=0.9840;MQ=97.35;MQ0=0;MQRankSum=-3.559;QD=37.96;ReadPosRankSum=-1.687;VQSLOD=3.5083;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:84.24:0,84,1027	0/0:4,0:4:12.04:0,12,148	0/0:28,0:27:78.20:0,78,913	0/0:35,0:35:95.90:0,96,1101	0/0:18,0:18:54.13:0,54,642	0/0:24,0:24:72.18:0,72,861	0/0:21,0:21:63.20:0,63,780	1/1:0,16:15:45.15:641,45,0	0/0:21,0:21:60.16:0,60,710	0/0:20,0:20:51.14:0,51,613	0/0:16,0:16:48.15:0,48,595	0/0:19,0:19:51.13:0,51,607	0/0:17,0:17:48.13:0,48,582	0/0:17,0:17:48.14:0,48,583	0/0:13,0:13:39.12:0,39,484	0/0:20,0:20:54.17:0,54,670	0/0:30,0:30:90.25:0,90,1099	0/0:25,0:25:72.15:0,72,859	0/0:14,0:14:39.12:0,39,475	0/0:17,0:17:45.13:0,45,545	0/0:23,0:23:66.21:0,66,818	0/0:20,0:20:60.19:0,60,744	0/0:21,0:21:63.20:0,63,781	0/0:27,0:27:69.20:0,69,841	0/0:22,0:22:66.21:0,66,818	1/1:0,17:18:54.18:771,54,0	0/0:26,0:24:75.19:0,75,901	0/0:11,0:11:30.07:0,30,356
chr10	45567679	.	TG	T	6985.13	PASS	AB=0.933;AC=43;AF=0.768;AN=56;BaseQRankSum=2.694;DP=491;FS=0.882;HRun=10;HaplotypeScore=60.7584;InbreedingCoeff=0.8837;MQ=80.68;MQ0=0;MQRankSum=-3.828;QD=19.19;ReadPosRankSum=6.851;VQSLOD=4.9611;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,28:33:74.97:651,75,0	1/1:1,9:10:5.22:163,5,0	0/0:19,0:19:28.74:0,29,304	0/0:19,0:17:31.51:0,32,271	1/1:6,11:17:5.66:269,6,0	0/0:19,0:19:45.03:0,45,451	0/0:19,0:19:49.34:0,49,509	0/0:13,0:19:21.98:0,22,121	1/1:3,16:19:44.97:391,45,0	1/1:2,8:10:20.99:182,21,0	1/1:3,12:15:29.98:260,30,0	1/1:1,14:15:35.99:312,36,0	1/1:1,15:16:11.69:320,12,0	1/1:1,12:13:32.98:286,33,0	1/1:0,17:18:47.03:397,47,0	1/1:0,14:14:32.99:286,33,0	0/0:31,0:31:84.13:0,84,888	1/1:2,23:25:62.98:547,63,0	1/1:4,8:12:20.97:182,21,0	1/1:2,14:16:35.99:312,36,0	1/1:3,14:17:11.81:331,12,0	1/1:4,18:23:52.93:434,53,0	1/1:2,14:16:41.99:363,42,0	1/1:1,15:16:44.99:391,45,0	1/1:4,13:18:38.95:333,39,0	0/1:10,1:14:2.10:2,0,117	1/1:1,15:16:41.96:365,42,0	1/1:2,9:11:23.99:208,24,0
chr10	45568364	.	GGA	G	2100.57	PASS	AB=0.874;AC=16;AF=0.286;AN=56;BaseQRankSum=5.411;DP=679;FS=0.000;HRun=0;HaplotypeScore=124.1675;InbreedingCoeff=0.6414;MQ=70.03;MQ0=25;MQRankSum=3.157;QD=9.50;ReadPosRankSum=-0.148;VQSLOD=2.6902;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:32:66.23:0,66,1075	0/0:8,0:8:19.26:0,19,270	0/1:24,0:10:16.42:16,0,112	0/0:40,0:22:0.54:0,1,170	1/1:6,14:19:35.47:448,35,0	0/0:21,0:21:51.17:0,51,842	0/0:22,0:22:48.16:0,48,792	0/0:19,0:19:47.47:0,47,341	0/0:22,0:22:48.63:0,49,765	1/1:3,28:30:59.90:730,60,0	1/1:3,11:14:17.42:222,17,0	0/1:23,1:24:26.88:27,0,644	0/0:21,1:22:6.94:0,7,529	0/0:25,0:25:48.16:0,48,792	1/1:5,19:23:17.71:225,18,0	1/1:5,20:25:18.01:225,18,0	0/0:30,0:27:57.13:0,57,853	0/1:2,13:14:5.92:135,0,6	0/0:28,0:27:60.12:0,60,930	0/1:19,0:18:0.70:1,0,476	0/0:36,0:33:53.91:0,54,885	0/0:27,0:27:54.64:0,55,862	0/0:22,0:20:39.13:0,39,642	0/0:26,0:26:7.60:0,8,569	1/1:8,16:25:21.50:259,21,0	0/0:35,0:33:65.87:0,66,468	0/0:18,0:18:39.11:0,39,642	0/0:20,0:19:28.65:0,29,350
chr10	45568486	.	C	CGTGTGTGTGTGTGT	7657.12	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.913;DP=837;FS=0.000;HRun=0;HaplotypeScore=315.1351;InbreedingCoeff=0.9978;MQ=73.35;MQ0=0;MQRankSum=-9.833;QD=114.29;ReadPosRankSum=-4.598;VQSLOD=2.8166;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:68,0:68:99:0,190,6856	0/0:10,0:10:21.07:0,21,769	0/0:36,0:36:72.13:0,72,2135	0/0:30,0:30:63.19:0,63,1904	0/0:28,0:28:72.25:0,72,2728	0/0:18,0:18:48.15:0,48,1797	0/0:35,0:35:81.23:0,81,3027	1/1:28,0:28:63.21:3071,63,0	0/0:25,0:25:60.19:0,60,2226	0/0:30,0:30:69.23:0,69,2544	0/0:19,0:19:42.13:0,42,1455	0/0:27,0:27:75.23:0,75,2532	0/0:26,0:26:69.24:0,69,2524	0/0:23,0:23:51.17:0,51,1870	0/0:21,0:22:57.20:0,57,2287	0/0:33,0:33:90.28:0,90,3269	0/0:33,0:33:87.24:0,87,3086	0/0:32,0:32:87.22:0,87,3058	0/0:21,0:21:42.13:0,42,1407	0/0:20,0:20:45.14:0,45,1709	0/0:49,0:49:99:0,120,4422	0/0:32,0:32:69.19:0,69,2416	0/0:29,0:29:75.24:0,75,2661	0/0:51,0:51:99:0,117,4301	0/0:28,0:28:69.22:0,69,2630	1/1:28,9:39:99:4586,101,0	0/0:27,0:27:69.24:0,69,2654	0/0:18,0:18:39.13:0,39,1545
chr10	45573402	.	T	TA	4442.99	PASS	AB=0.889;AC=15;AF=0.268;AN=56;BaseQRankSum=-11.988;DP=649;FS=0.358;HRun=8;HaplotypeScore=70.2469;InbreedingCoeff=0.9105;MQ=72.24;MQ0=1;MQRankSum=-1.355;QD=25.83;ReadPosRankSum=0.820;VQSLOD=5.5270;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,108,980	0/0:8,0:8:24.01:0,24,220	0/0:19,0:18:31.15:0,31,347	0/0:20,0:14:22.34:0,22,205	1/1:0,20:20:57.13:641,57,0	0/0:25,0:25:69.04:0,69,631	0/0:38,0:38:99:0,99,906	0/0:31,0:31:75.01:0,75,682	0/0:27,0:27:78.02:0,78,709	1/1:2,16:18:48.14:554,48,0	1/1:0,7:7:18.01:193,18,0	0/0:24,0:24:54.01:0,54,490	0/0:24,0:24:69.02:0,69,627	0/0:34,0:35:95.05:0,95,849	1/1:3,20:23:57.17:658,57,0	1/1:4,22:26:66.20:762,66,0	0/0:25,0:25:63.02:0,63,576	1/1:1,26:27:72.21:831,72,0	0/0:24,0:24:69:0,69,617	0/0:22,0:22:53.97:0,54,485	0/0:16,0:16:45.02:0,45,412	0/0:19,0:19:53.99:0,54,485	0/0:8,0:8:15:0,15,137	0/0:31,0:31:90.03:0,90,819	1/1:1,26:27:69.21:796,69,0	0/1:21,3:24:9.21:9,0,434	0/0:33,0:32:78.01:0,78,709	0/0:6,0:6:15.01:0,15,137
chr10	45574634	.	AAAAG	A	989.85	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-0.545;DP=449;FS=41.282;HRun=0;HaplotypeScore=85.3410;InbreedingCoeff=0.7961;MQ=61.25;MQ0=7;MQRankSum=-3.182;QD=19.80;ReadPosRankSum=-2.979;VQSLOD=1.3216;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:53.10:0,53,685	0/0:1,0:1:3.01:0,3,40	0/0:23,0:12:14.35:0,14,251	0/0:10,0:5:14.85:0,15,107	0/0:24,0:23:55.33:0,55,947	0/0:10,0:9:8.93:0,9,64	0/0:24,0:24:44.64:0,45,353	1/1:30,8:36:71.80:761,72,0	0/0:12,0:11:17.83:0,18,235	0/0:21,0:21:54.03:0,54,853	0/0:9,0:8:21.07:0,21,373	0/0:6,0:6:9.01:0,9,103	0/0:16,0:16:35.99:0,36,448	0/0:14,0:14:29.56:0,30,341	0/0:11,0:11:23.86:0,24,261	0/0:12,0:11:29.60:0,30,410	0/0:30,0:29:67.39:0,67,1204	0/0:21,0:21:51:0,51,779	0/0:29,0:28:41.93:0,42,596	0/0:11,0:10:29.74:0,30,369	0/0:14,0:14:18.35:0,18,179	0/0:7,0:6:17.97:0,18,233	0/0:8,0:6:14.63:0,15,157	0/0:28,0:27:49.77:0,50,608	0/0:18,0:16:42.13:0,42,821	1/1:9,3:12:31.95:349,32,0	0/0:7,0:7:20.69:0,21,235	0/0:5,0:4:6.45:0,6,51
chr10	45574785	.	TC	T	896.60	PASS	AB=0.917;AC=14;AF=0.250;AN=56;BaseQRankSum=14.192;DP=449;FS=130.159;HRun=2;HaplotypeScore=131.5564;InbreedingCoeff=-0.3280;MQ=50.37;MQ0=3;MQRankSum=-12.054;QD=3.88;ReadPosRankSum=3.545;VQSLOD=-0.1554;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:12:32.60:0,33,455	0/1:7,0:7:34.48:34,0,158	0/0:21,0:9:23.84:0,24,281	0/0:17,0:11:21.54:0,22,306	0/1:20,2:22:11.63:12,0,367	0/0:5,0:5:8.86:0,9,134	0/0:10,0:10:24.08:0,24,352	0/0:26,2:27:33.95:0,34,1062	0/0:10,0:10:27.09:0,27,398	0/1:21,0:21:75.67:76,0,492	0/1:22,1:22:99:169,0,131	0/1:7,0:7:4.06:4,0,246	0/0:11,1:12:26.85:0,27,402	0/0:8,0:8:21.47:0,21,281	0/1:18,1:19:22.20:22,0,552	0/1:5,1:6:26.60:27,0,122	0/0:13,0:13:30.10:0,30,449	0/0:6,0:6:18.04:0,18,248	0/0:5,1:5:15.02:0,15,200	0/1:15,1:16:49.84:128,0,50	0/0:38,0:38:99:0,102,1470	0/1:27,3:30:99:138,0,244	0/1:20,1:21:75.16:75,0,270	0/0:31,1:32:80.62:0,81,1226	0/1:16,3:19:99:136,0,327	0/1:15,4:18:99:138,0,443	0/1:2,2:4:64.75:65,0,76	0/1:17,0:17:25.28:25,0,491
chr10	45574787	.	CT	C	1902.72	PASS	AB=0.767;AC=12;AF=0.214;AN=56;BaseQRankSum=14.355;DP=454;FS=146.070;HRun=2;HaplotypeScore=131.9830;InbreedingCoeff=-0.3117;MQ=50.16;MQ0=3;MQRankSum=-12.266;QD=9.24;ReadPosRankSum=2.951;VQSLOD=0.0022;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:32.90:0,33,460	0/1:5,3:8:90.05:90,0,158	0/0:21,1:10:21.02:0,21,266	0/0:17,0:11:24.37:0,24,302	0/1:16,7:23:35.66:36,0,386	0/0:3,1:4:1.82:0,2,125	0/0:10,0:10:0.64:0,1,312	0/0:31,0:30:76.96:0,77,1144	0/0:10,0:10:27.09:0,27,402	0/1:14,7:21:99:232,0,464	0/1:6,16:22:99:372,0,125	0/0:8,0:8:13.42:0,13,261	0/0:13,0:13:31.24:0,31,417	0/0:8,0:8:18.06:0,18,261	0/0:20,0:20:1.18:0,1,532	0/1:6,0:6:8.71:9,0,123	0/0:12,0:12:33.03:0,33,464	0/0:6,0:6:15.05:0,15,217	0/0:6,0:5:15.05:0,15,218	0/1:5,13:18:42.40:368,0,42	0/0:38,0:38:99:0,102,1474	0/1:13,16:29:99:369,0,204	0/1:10,10:20:99:158,0,245	0/0:31,0:31:80.62:0,81,1215	0/1:11,7:18:99:222,0,287	0/1:17,2:18:93.24:93,0,435	0/1:4,0:4:29.06:29,0,58	0/1:14,3:17:71.27:71,0,486
chr10	45574804	.	T	TC	562.02	PASS	AB=0.918;AC=16;AF=0.286;AN=56;BaseQRankSum=10.669;DP=367;FS=6.457;HRun=5;HaplotypeScore=121.2079;InbreedingCoeff=-0.4026;MQ=56.56;MQ0=4;MQRankSum=-8.541;QD=2.97;ReadPosRankSum=0.321;VQSLOD=-0.3748;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:33.11:0,33,423	0/1:7,0:7:17.49:17,0,138	0/0:14,0:8:14.92:0,15,186	0/0:21,0:14:24.02:0,24,273	0/1:14,3:17:69.91:70,0,285	0/0:5,0:5:10.51:0,11,140	0/0:10,0:10:11.43:0,11,296	0/0:29,1:30:0.02:0,0,766	0/1:9,0:9:9.86:10,0,204	0/1:18,1:19:0.11:0,0,428	0/1:12,1:12:44.89:45,0,168	0/1:8,2:10:62.87:63,0,194	0/1:14,0:14:19.34:19,0,313	0/0:8,0:8:2.99:0,3,214	0/1:11,1:12:48.25:48,0,310	0/1:5,1:6:29.68:30,0,134	0/1:9,0:9:0.35:0,0,212	0/0:3,0:3:9.03:0,9,117	0/0:8,0:8:14.50:0,14,249	0/1:10,0:10:37.39:37,0,146	0/0:32,0:32:52.74:0,53,933	0/1:15,3:18:74.79:75,0,288	0/1:11,2:13:70.46:70,0,195	0/0:25,0:25:65.71:0,66,807	0/1:11,1:12:45.54:46,0,258	0/1:16,1:17:99:104,0,269	0/1:2,1:3:29.67:74,0,30	0/0:9,0:9:18.77:0,19,303
chr10	45574878	.	GT	G	4194.88	PASS	AB=0.500;AC=41;AF=0.891;AN=46;BaseQRankSum=-2.258;DP=149;FS=0.000;HRun=1;HaplotypeScore=130.6108;InbreedingCoeff=0.3895;MQ=45.64;MQ0=1;MQRankSum=-1.821;QD=29.96;ReadPosRankSum=3.657;VQSLOD=3.4004;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,6:6:16.60:198,17,0	1/1:0,4:4:12.04:155,12,0	0/0:3,1:1:2.37:0,2,8	0/0:5,0:2:4.12:0,4,19	1/1:1,7:8:4.19:78,4,0	0/1:0,7:7:0.14:175,0,0	./.	./.	1/1:0,8:8:21.01:252,21,0	1/1:0,8:8:24.08:311,24,0	1/1:0,6:6:15.05:190,15,0	1/1:0,8:8:15.33:206,15,0	1/1:0,7:7:21.07:272,21,0	1/1:0,7:7:21.07:272,21,0	1/1:0,10:10:28.33:353,28,0	1/1:0,3:3:9.03:117,9,0	1/1:0,2:2:6.02:78,6,0	./.	1/1:0,1:1:3.01:39,3,0	1/1:0,4:4:9.03:112,9,0	./.	1/1:0,17:17:20.92:267,21,0	1/1:0,3:3:6.02:78,6,0	1/1:0,4:4:0.97:37,1,0	1/1:0,6:6:18.06:229,18,0	1/1:0,11:11:30.10:389,30,0	1/1:0,10:10:30.10:388,30,0	./.
chr10	45575219	.	G	GCA	2080.84	PASS	AB=0.782;AC=34;AF=0.680;AN=50;BaseQRankSum=-0.804;DP=605;FS=0.704;HRun=0;HaplotypeScore=113.1974;InbreedingCoeff=0.0893;MQ=65.73;MQ0=12;MQRankSum=-0.127;QD=4.43;ReadPosRankSum=-0.669;VQSLOD=2.8932;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:36,5:40:67.13:337,0,67	./.	./.	0/1:29,0:21:0:0,0,0	1/1:15,0:14:15.03:179,15,0	0/1:10,5:15:23.71:80,0,24	0/1:15,5:23:47.43:157,0,47	./.	0/1:19,5:26:36.58:120,0,37	1/1:13,0:12:17.95:162,18,0	0/1:5,1:10:0:0,0,0	0/1:22,13:36:67.98:282,0,68	0/1:12,2:14:99:113,0,108	1/1:11,5:17:3.01:45,3,0	1/1:17,2:33:9.02:116,9,0	1/1:7,0:16:6:52,6,0	0/0:25,0:26:31.34:0,31,432	1/1:13,1:19:14.34:100,14,0	1/1:13,0:16:9.96:61,10,0	0/1:8,0:13:0.03:0,0,0	1/1:52,0:48:12:107,12,0	0/0:17,7:24:6.02:0,6,65	1/1:12,4:15:3.01:45,3,0	0/1:14,15:32:99:191,0,108	1/1:5,0:9:3:26,3,0	0/0:7,0:19:11.98:0,12,56	1/1:12,0:17:3.47:27,3,0	1/1:5,0:4:3:25,3,0
chr10	45575794	.	T	TA	437.77	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-2.418;DP=412;FS=4.340;HRun=7;HaplotypeScore=46.5873;InbreedingCoeff=0.6043;MQ=73.38;MQ0=3;MQRankSum=-0.780;QD=24.32;ReadPosRankSum=-0.356;VQSLOD=3.6660;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:66.08:0,66,627	0/0:7,0:7:18.03:0,18,173	0/0:23,0:14:28.83:0,29,246	0/0:21,0:11:2.75:0,3,97	0/0:19,0:19:51.06:0,51,488	0/0:18,0:18:48.06:0,48,458	0/0:5,0:5:12.02:0,12,116	0/0:29,0:29:40.75:0,41,141	0/0:12,0:12:25.75:0,26,305	0/0:18,0:18:48.08:0,48,463	0/0:20,0:20:48.05:0,48,458	0/0:6,0:6:12.02:0,12,116	0/0:7,0:7:9.01:0,9,87	0/0:11,0:11:33.05:0,33,318	0/0:13,0:13:39.06:0,39,376	0/0:10,0:10:27.04:0,27,261	1/1:2,16:18:45.13:532,45,0	0/0:34,0:34:46.22:0,46,820	0/0:17,0:17:16.95:0,17,282	0/0:13,0:13:36.04:0,36,340	0/0:8,0:8:21.03:0,21,203	0/0:1,0:1:3:0,3,29	0/0:8,0:8:21.03:0,21,202	0/0:3,0:3:9:0,9,82	0/0:27,0:27:69.07:0,69,652	0/0:17,0:17:33.30:0,33,111	0/0:19,0:19:54.07:0,54,516	0/0:3,0:3:9.01:0,9,87
chr10	45575801	.	AG	A	1326.57	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.643;DP=415;FS=3.738;HRun=2;HaplotypeScore=45.7913;InbreedingCoeff=0.8471;MQ=77.40;MQ0=3;MQRankSum=-1.093;QD=31.59;ReadPosRankSum=-0.667;VQSLOD=2.9036;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:72.10:0,72,934	0/0:9,0:9:27.04:0,27,315	0/0:28,0:17:32.89:0,33,357	0/0:21,0:12:22.46:0,22,180	0/0:19,0:19:57.13:0,57,741	0/0:16,0:16:48.12:0,48,634	0/0:5,0:5:15.03:0,15,195	1/1:2,23:25:71.97:816,72,0	0/0:15,0:16:14.40:0,14,514	0/0:18,0:18:51.15:0,51,688	0/0:20,0:20:56.37:0,56,742	0/0:5,0:5:15.04:0,15,197	0/0:3,0:3:9.03:0,9,129	0/0:14,0:14:42.09:0,42,531	0/0:15,0:15:45.12:0,45,608	0/0:9,0:9:27.08:0,27,371	0/0:17,0:17:44.74:0,45,325	0/0:36,0:36:89.30:0,89,1332	0/0:12,0:12:27.04:0,27,335	0/0:13,0:13:39.12:0,39,541	0/0:7,0:7:21.07:0,21,301	0/0:1,0:1:3.01:0,3,43	0/0:9,0:9:27.01:0,27,310	0/0:4,0:4:12.01:0,12,135	0/0:26,0:26:78.13:0,78,977	1/1:0,17:17:51.14:632,51,0	0/0:20,0:20:54.14:0,54,711	0/0:5,0:5:14.98:0,15,172
chr10	45576985	.	GGCGC	G	997.60	PASS	AB=1.000;AC=19;AF=0.475;AN=40;BaseQRankSum=0.742;DP=259;FS=0.000;HRun=0;HaplotypeScore=56.1538;InbreedingCoeff=0.5715;MQ=73.73;MQ0=7;MQRankSum=-1.295;QD=9.69;ReadPosRankSum=1.969;VQSLOD=1.9611;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:11:5.99:0,6,48	0/0:4,0:4:2.37:0,2,8	1/1:4,0:3:0.94:1,1,0	0/0:17,0:14:0.05:0,0,1	0/1:12,0:12:0:1,0,0	0/0:6,0:6:2.84:0,3,14	0/0:15,0:14:11.73:0,12,102	0/0:16,0:14:3.01:0,3,54	./.	1/1:6,2:8:6.02:95,6,0	./.	0/0:4,0:4:6.01:0,6,75	0/0:5,0:5:6.02:0,6,98	./.	./.	1/1:7,0:7:11.06:113,11,0	0/0:25,0:23:30.04:0,30,488	1/1:22,0:22:42.04:582,42,0	1/1:8,3:11:9.03:141,9,0	./.	1/1:20,0:19:6.02:82,6,0	./.	./.	1/1:7,0:7:2.75:34,3,0	./.	0/0:18,0:18:32.94:0,33,557	1/1:5,0:5:3.01:38,3,0	1/1:7,0:7:3.01:46,3,0
chr10	45577000	.	GCGCGCA	G	1222.43	PASS	AB=0.848;AC=23;AF=0.548;AN=42;BaseQRankSum=1.070;DP=200;FS=0.947;HRun=0;HaplotypeScore=50.5073;InbreedingCoeff=0.4244;MQ=64.85;MQ0=14;MQRankSum=-0.969;QD=13.74;ReadPosRankSum=1.282;VQSLOD=1.4247;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:9:5.99:0,6,48	1/1:4,0:4:2.04:6,2,0	1/1:3,0:2:0.94:1,1,0	0/0:8,0:5:0.03:0,0,0	0/1:2,9:11:0:1,0,0	0/0:5,0:5:5.82:0,6,34	0/0:8,0:6:2.80:0,3,107	0/0:8,0:4:5.99:0,6,75	./.	0/1:6,0:6:56.05:87,0,56	./.	0/1:4,0:4:14.38:14,0,66	0/0:5,0:5:6.02:0,6,98	./.	./.	1/1:2,8:10:12.02:232,12,0	0/0:27,0:24:51.05:0,51,879	1/1:20,1:21:45.06:640,45,0	1/1:6,0:5:9.03:141,9,0	./.	1/1:7,0:6:6.02:82,6,0	./.	./.	1/1:5,0:5:2.42:10,2,0	1/1:7,0:6:5.99:49,6,0	0/0:13,0:12:36.12:0,36,743	1/1:0,0:2:3.01:52,3,0	1/1:2,0:1:3.01:46,3,0
chr10	45577130	.	C	CA	236.94	PASS	AC=2;AF=0.056;AN=36;BaseQRankSum=-3.776;DP=274;FS=0.000;HRun=7;HaplotypeScore=16.5177;InbreedingCoeff=0.3841;MQ=21.18;MQ0=155;MQRankSum=1.616;QD=11.85;ReadPosRankSum=0.354;VQSLOD=0.2363;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:7:12.02:0,12,115	0/0:6,0:5:15.02:0,15,145	./.	./.	0/0:24,0:14:8.96:0,9,77	0/0:8,0:2:6.01:0,6,58	0/0:11,0:3:9.01:0,9,87	./.	./.	0/0:17,0:12:33:0,33,298	0/0:17,0:13:9.01:0,9,87	./.	0/0:6,0:1:3:0,3,29	0/0:6,0:3:5.80:0,6,42	./.	0/0:4,0:2:6.01:0,6,58	0/0:21,0:7:12.02:0,12,115	0/0:14,0:4:3:0,3,29	./.	0/0:9,0:6:15.02:0,15,144	./.	./.	0/0:8,0:7:14.97:0,15,133	0/0:5,0:2:6.01:0,6,58	0/0:13,0:9:23.89:0,24,200	1/1:3,17:11:27.08:326,27,0	./.	0/0:9,0:2:3:0,3,29
chr10	45579624	.	T	TACAC	1830.44	PASS	AB=0.781;AC=34;AF=0.680;AN=50;BaseQRankSum=-4.658;DP=497;FS=5.768;HRun=0;HaplotypeScore=117.1981;InbreedingCoeff=0.3851;MQ=63.43;MQ0=5;MQRankSum=3.548;QD=5.68;ReadPosRankSum=-3.470;VQSLOD=1.2086;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:15,8:25:6.02:115,6,0	0/1:7,0:11:0.41:0,0,107	./.	./.	0/1:13,7:21:40.37:64,0,40	1/1:16,0:21:2.74:12,3,0	1/1:16,0:16:15.02:251,15,0	./.	1/1:12,0:12:3.01:42,3,0	1/1:20,1:24:19.37:275,19,0	1/1:11,0:11:9.03:176,9,0	1/1:14,0:14:5.98:64,6,0	1/1:14,0:14:14.96:158,15,0	1/1:9,6:19:6.02:141,6,0	1/1:5,1:10:3.01:52,3,0	1/1:10,0:14:12.04:209,12,0	0/0:15,0:19:20.88:0,21,237	1/1:9,6:16:0.47:1,0,0	0/0:10,0:15:6.01:0,6,56	0/0:13,0:24:18.02:0,18,167	0/0:9,0:13:3:0,3,28	1/1:13,0:13:9.01:101,9,0	1/1:7,4:11:3.01:70,3,0	0/1:14,6:27:34.59:134,0,35	1/1:10,1:17:5.98:88,6,0	0/1:14,0:22:35.93:36,0,159	0/0:13,0:25:29.82:0,30,279	0/0:4,0:9:3:0,3,28
chr10	45580108	.	CTCTCTCTG	C	1819.04	PASS	AB=0.621;AC=2;AF=0.036;AN=56;BaseQRankSum=8.683;DP=788;FS=2.184;HRun=0;HaplotypeScore=203.1384;InbreedingCoeff=0.3036;MQ=78.61;MQ0=13;MQRankSum=-1.689;QD=33.69;ReadPosRankSum=-3.556;VQSLOD=2.9463;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,120,4603	0/0:13,0:13:36.12:0,36,1503	0/0:60,0:37:31.75:0,32,586	0/0:94,0:60:35.82:0,36,1203	0/0:16,0:16:27.09:0,27,918	0/0:23,0:23:57.20:0,57,2169	0/0:42,0:42:87.28:0,87,3183	0/1:9,18:27:1.60:874,0,2	0/0:26,0:26:57.20:0,57,2080	0/0:26,0:26:69.24:0,69,2775	0/0:13,0:13:30.10:0,30,1125	0/0:25,0:25:57.20:0,57,2117	0/0:23,0:23:63.22:0,63,2571	0/0:24,0:24:54.19:0,54,2020	0/0:28,0:28:78.27:0,78,3212	0/0:27,0:27:72.25:0,72,2782	0/0:36,0:36:99:0,102,3763	0/0:24,0:24:57.20:0,57,2264	0/0:9,0:9:15.05:0,15,503	0/0:24,0:24:57.18:0,57,1992	0/0:32,0:32:69.24:0,69,2743	0/0:30,0:30:75.24:0,75,2828	0/0:14,0:14:30.09:0,30,1024	0/0:31,0:31:84.29:0,84,3462	0/0:18,0:18:42.14:0,42,1491	0/1:12,15:27:99:1034,0,172	0/0:15,0:15:36.10:0,36,1358	0/0:11,0:11:24.08:0,24,909
chr10	45580488	.	TC	T	3504.46	PASS	AB=0.944;AC=15;AF=0.268;AN=56;BaseQRankSum=6.355;DP=643;FS=0.370;HRun=7;HaplotypeScore=72.5616;InbreedingCoeff=0.8986;MQ=81.20;MQ0=2;MQRankSum=-3.114;QD=19.91;ReadPosRankSum=2.321;VQSLOD=3.2832;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:96.27:0,96,1177	0/0:6,0:6:18.06:0,18,226	0/0:39,0:34:48.76:0,49,799	0/0:26,0:24:46.98:0,47,500	1/1:0,17:17:48.01:465,48,0	0/0:15,0:15:36.10:0,36,440	0/0:31,0:31:75.16:0,75,896	0/0:33,0:33:10.47:0,10,254	0/0:26,0:26:69.18:0,69,830	1/1:1,23:24:69.01:681,69,0	1/1:1,15:16:48.10:487,48,0	0/0:23,0:23:69.22:0,69,868	0/0:19,0:19:54.16:0,54,666	0/0:18,0:18:54.17:0,54,679	1/1:2,16:18:36.08:367,36,0	1/1:3,16:19:33.07:337,33,0	0/0:35,0:35:96.29:0,96,1191	1/1:2,26:28:72.16:733,72,0	0/0:21,0:21:57.06:0,57,644	0/0:15,0:15:33.09:0,33,394	0/0:42,0:42:99:0,108,1342	0/0:18,0:18:45.14:0,45,565	0/0:13,0:13:36.09:0,36,425	0/0:27,0:27:72.23:0,72,905	1/1:3,17:20:42.10:428,42,0	0/1:32,2:34:6.57:7,0,304	0/0:22,0:22:66.14:0,66,785	0/0:4,0:4:6.02:0,6,75
chr10	45580571	.	GCC	G	2175.39	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.086;DP=657;FS=8.464;HRun=3;HaplotypeScore=81.1529;InbreedingCoeff=0.9701;MQ=83.05;MQ0=0;MQRankSum=-0.633;QD=36.87;ReadPosRankSum=1.639;VQSLOD=2.8555;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,117,2243	0/0:11,0:11:27.07:0,27,485	0/0:18,0:19:53.54:0,54,934	0/0:18,0:18:50.76:0,51,894	0/0:28,0:28:81.28:0,81,1526	1/1:0,21:21:60.20:919,60,0	1/1:1,37:38:90.31:1378,90,0	0/0:23,0:23:69.24:0,69,1312	0/0:33,0:33:99:0,99,1845	0/0:21,0:21:60.21:0,60,1150	0/0:11,0:11:33.10:0,33,605	0/0:34,0:34:99:0,102,1938	0/0:14,0:14:39.12:0,39,719	0/0:27,0:27:81.28:0,81,1549	0/0:24,0:24:63.17:0,63,1204	0/0:16,0:16:36.12:0,36,696	0/0:31,0:31:90.29:0,90,1697	0/0:18,0:18:51.17:0,51,965	0/0:18,0:18:54.17:0,54,1001	0/0:14,0:14:42.14:0,42,797	0/0:56,0:56:99:0,166,3164	0/0:18,0:18:51.17:0,51,982	0/0:20,0:20:60.21:0,60,1130	0/0:34,0:34:99:0,102,1900	0/0:20,0:20:57.20:0,57,1089	0/0:29,0:29:87.30:0,87,1677	0/0:17,0:16:51.17:0,51,953	0/0:3,0:3:9.03:0,9,174
chr10	45585127	.	GAA	G	1338.64	PASS	AB=0.878;AC=21;AF=0.375;AN=56;BaseQRankSum=3.411;DP=571;FS=23.885;HRun=15;HaplotypeScore=93.5540;InbreedingCoeff=0.6364;MQ=65.99;MQ0=21;MQRankSum=-2.739;QD=7.12;ReadPosRankSum=6.280;VQSLOD=-0.4356;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:32.15:0,32,295	0/1:6,1:8:7.49:7,0,59	0/0:55,0:21:13.37:0,13,84	0/0:59,0:21:10.65:0,11,106	1/1:9,6:15:8.85:138,9,0	1/1:5,0:17:23.72:98,24,0	1/1:4,0:8:15.46:62,15,0	0/1:19,0:18:5.12:5,0,31	0/0:12,0:11:5.98:0,6,59	0/1:16,1:19:10.78:115,0,11	1/1:11,4:17:30.35:223,30,0	0/0:20,0:20:14.98:0,15,160	0/0:16,0:15:19.98:0,20,210	0/0:16,0:16:8.95:0,9,84	1/1:10,7:16:26.28:253,26,0	1/1:10,7:18:0.29:235,0,0	0/0:37,0:38:58.41:0,58,841	1/1:9,0:9:1.44:67,1,0	0/0:16,0:12:15.33:0,15,133	0/0:37,0:36:50.44:0,50,496	0/0:5,0:5:5.96:0,6,44	0/0:22,0:22:27.81:0,28,303	0/0:14,0:13:8.91:0,9,114	0/0:14,0:14:6.48:0,6,58	1/1:10,7:18:29.21:267,29,0	1/1:22,0:22:19.23:61,19,0	0/0:30,0:31:53.34:0,53,436	0/0:5,0:5:7.82:0,8,56
chr10	45585140	.	AAAG	A	3491.75	PASS	AB=1.000;AC=34;AF=0.607;AN=56;BaseQRankSum=1.911;DP=677;FS=3.969;HRun=0;HaplotypeScore=111.5413;InbreedingCoeff=0.2281;MQ=57.99;MQ0=32;MQRankSum=-1.402;QD=6.51;ReadPosRankSum=-4.518;VQSLOD=1.2914;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:28:3.21:0,3,250	0/0:11,0:11:24.17:0,24,169	0/1:64,0:11:6.86:7,0,63	0/1:66,0:17:16.29:16,0,71	1/1:27,0:27:34.49:276,34,0	1/1:15,2:17:4.71:155,5,0	0/1:14,0:14:18.89:120,0,19	1/1:4,18:21:17.61:325,18,0	0/1:11,0:10:0.03:0,0,46	1/1:30,0:29:55.44:293,55,0	1/1:22,0:21:47.39:372,47,0	0/1:20,0:20:2.42:2,0,109	0/1:14,0:12:17.39:17,0,135	0/0:17,0:17:10.83:0,11,127	1/1:21,0:20:36.92:250,37,0	1/1:26,0:26:36.17:295,36,0	0/0:45,0:45:12.90:0,13,929	1/1:14,0:14:3.97:78,4,0	0/1:19,0:14:9.06:95,0,9	0/1:43,0:41:96.03:143,0,96	1/1:7,0:7:8.10:30,8,0	0/1:16,0:16:23.82:24,0,199	0/0:18,0:17:13.06:0,13,96	0/0:20,0:20:11.04:0,11,74	1/1:21,0:21:38.13:296,38,0	1/1:4,24:28:56.85:534,57,0	0/1:29,0:29:72.55:137,0,73	1/1:5,0:5:0.46:24,0,0
chr10	45585142	.	AG	A	4094.63	PASS	AB=0.978;AC=39;AF=0.696;AN=56;BaseQRankSum=3.489;DP=675;FS=0.905;HRun=1;HaplotypeScore=93.0089;InbreedingCoeff=0.0884;MQ=57.55;MQ0=31;MQRankSum=-0.517;QD=6.64;ReadPosRankSum=-2.834;VQSLOD=-0.5179;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:28:38.66:39,0,56	0/1:10,1:11:43.05:45,0,43	0/1:55,5:10:13.68:14,0,25	0/1:63,1:16:29.35:29,0,56	1/1:27,0:27:39.90:259,40,0	0/1:18,0:18:20.15:72,0,20	0/1:15,0:15:50.53:97,0,51	1/1:21,0:20:31.85:346,32,0	0/1:12,0:11:1.14:5,0,1	1/1:30,0:29:58.54:277,59,0	1/1:23,0:22:49.22:312,49,0	0/1:19,0:19:4.15:4,0,39	0/1:13,1:12:51.73:69,0,52	0/0:19,0:19:8.09:0,8,63	1/1:21,0:20:34.37:150,34,0	1/1:27,0:27:47.71:211,48,0	0/1:44,0:44:35.98:36,0,447	1/1:14,0:14:8.38:93,8,0	1/1:19,0:14:31.79:226,32,0	1/1:43,0:41:71.54:526,72,0	1/1:8,0:8:17.93:85,18,0	0/1:18,0:18:44.26:44,0,56	0/0:19,0:18:6.51:0,7,35	0/0:20,0:20:9.62:0,10,46	1/1:21,0:21:36.03:222,36,0	1/1:26,0:26:56.76:455,57,0	1/1:26,1:27:51.12:412,51,0	1/1:5,0:5:13.22:68,13,0
chr10	45585143	.	G	GA	694.84	PASS	AB=0.860;AC=21;AF=0.375;AN=56;BaseQRankSum=-2.131;DP=682;FS=1.107;HRun=15;HaplotypeScore=109.8599;InbreedingCoeff=0.2458;MQ=56.75;MQ0=31;MQRankSum=0.813;QD=1.63;ReadPosRankSum=-1.333;VQSLOD=-0.0252;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:21,0:28:6.33:141,0,6	0/0:11,0:11:26.64:0,27,145	0/1:59,0:9:0.71:1,0,34	0/1:65,0:17:2.12:2,0,40	0/0:21,0:27:20.16:0,20,55	0/0:19,0:19:5.03:0,5,139	0/0:15,0:15:15.25:0,15,116	0/1:21,0:20:5.62:47,0,6	0/1:3,10:12:11.91:20,0,12	0/0:9,0:29:16.98:0,17,62	0/1:19,0:23:19.39:19,0,37	1/1:5,15:20:3:26,3,0	1/1:13,1:12:17.61:116,18,0	0/0:4,16:20:2.78:0,3,19	0/0:3,0:20:17.45:0,17,51	0/0:20,0:28:12.36:0,12,71	0/0:42,0:43:23.39:0,23,316	0/0:14,0:15:10.78:0,11,31	0/1:19,0:14:13.87:17,0,14	0/1:42,0:40:0.47:104,0,0	0/1:9,0:9:11.18:17,0,11	1/1:5,14:19:24.83:182,25,0	0/1:4,15:18:0.14:0,0,0	0/1:5,15:20:12.62:21,0,13	0/0:14,0:22:18.38:0,18,52	1/1:25,0:26:11.79:70,12,0	1/1:26,0:27:9.79:79,10,0	0/0:4,0:4:1.35:0,1,13
chr10	45586149	.	AAGCCCGTT	A	3078.96	PASS	AB=0.511;AC=3;AF=0.054;AN=56;BaseQRankSum=9.631;DP=695;FS=3.725;HRun=0;HaplotypeScore=175.8315;InbreedingCoeff=0.6477;MQ=82.10;MQ0=0;MQRankSum=-7.280;QD=68.42;ReadPosRankSum=-2.912;VQSLOD=3.2534;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,129,5626	0/0:14,0:14:42.12:0,42,1776	0/0:20,0:20:57.12:0,57,2175	0/0:20,0:20:52.11:0,52,2031	0/0:22,0:22:66.14:0,66,2504	0/0:20,0:20:60.20:0,60,2657	0/0:41,0:41:99:0,123,5401	1/1:0,21:21:60.08:1551,60,0	0/0:24,0:24:72.20:0,72,3191	0/0:27,0:27:81.27:0,81,3439	0/0:16,0:16:48.15:0,48,1945	0/0:36,0:36:99:0,105,4541	0/0:19,0:19:57.17:0,57,2311	0/0:30,0:30:90.30:0,90,3727	0/0:27,0:27:81.28:0,81,3603	0/0:18,0:18:54.17:0,54,2150	0/0:34,0:34:99:0,102,4249	0/0:34,0:34:99:0,102,4493	0/0:16,0:16:48.16:0,48,2124	0/0:16,0:16:48.15:0,48,2087	0/0:55,0:55:99:0,166,7318	0/0:18,0:18:54.17:0,54,2312	0/0:12,0:12:36.12:0,36,1576	0/0:26,0:26:78.25:0,78,3320	0/0:19,0:19:57.20:0,57,2542	0/1:1,23:24:72.74:1634,0,73	0/0:18,0:18:54.17:0,54,2385	0/0:25,0:25:75.26:0,75,3415
chr10	45587565	.	CCCTGAGCTT	C	14094.40	PASS	AB=0.967;AC=17;AF=0.304;AN=56;BaseQRankSum=17.857;DP=732;FS=4.428;HRun=0;HaplotypeScore=205.4832;InbreedingCoeff=0.9324;MQ=88.45;MQ0=0;MQRankSum=-18.582;QD=58.73;ReadPosRankSum=3.196;VQSLOD=4.7501;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,41:45:99:2998,102,0	0/0:16,0:16:48.16:0,48,2214	0/0:28,0:28:78.25:0,78,3294	0/0:33,0:33:67.57:0,68,3142	0/0:28,0:28:84.29:0,84,3920	0/0:25,0:25:75.24:0,75,3538	0/0:19,0:19:51.18:0,51,2291	0/0:24,0:23:66.23:0,66,3154	1/1:1,24:25:63.22:1953,63,0	0/0:28,0:28:84.27:0,84,3936	0/0:20,0:20:60.21:0,60,2914	1/1:1,25:26:63.22:1875,63,0	1/1:1,19:20:48.16:1488,48,0	1/1:0,22:22:60.21:1776,60,0	0/0:32,0:32:96.33:0,96,4639	0/1:28,1:29:5.77:6,0,3802	0/0:26,0:26:75.26:0,75,3667	0/0:18,0:18:54.19:0,54,2560	0/0:27,0:27:78.25:0,78,3445	0/0:33,0:33:99:0,99,4384	0/0:45,0:45:99:0,129,5646	1/1:2,22:24:66.23:2046,66,0	1/1:5,20:25:38.58:1209,39,0	1/1:7,17:24:23.76:744,24,0	0/0:19,0:19:57.20:0,57,2788	0/0:32,0:32:87.29:0,87,4143	0/0:23,0:23:69.24:0,69,3110	0/0:16,0:16:48.16:0,48,2355
chr10	45588539	.	TCCTGCGGCTGCAGCCACGTGAGCCACG	T	2681.97	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.345;DP=451;FS=0.000;HRun=0;HaplotypeScore=287.7178;InbreedingCoeff=0.9042;MQ=75.69;MQ0=0;MQRankSum=-6.332;QD=95.78;ReadPosRankSum=2.930;VQSLOD=2.5300;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:42.61:0,43,3276	0/0:5,0:5:6.02:0,6,664	0/0:7,0:7:12.04:0,12,739	0/0:11,0:11:18.06:0,18,785	0/0:11,0:11:21.01:0,21,1003	1/1:1,10:11:18.06:1295,18,0	1/1:1,16:17:21.07:1505,21,0	0/0:13,0:13:21.03:0,21,1437	0/0:20,0:20:60.21:0,60,6761	0/0:8,0:8:20.94:0,21,1152	0/0:11,0:11:21.03:0,21,735	0/0:18,0:18:54.17:0,54,5277	0/0:18,0:18:51.18:0,51,3905	0/0:21,0:21:57.08:0,57,5360	0/0:16,0:16:45.15:0,45,4016	0/0:13,0:13:33.11:0,33,2736	0/0:42,0:42:99:0,120,12706	0/0:23,0:23:60.14:0,60,6903	0/0:14,0:14:36.09:0,36,1668	0/0:7,0:7:15:0,15,512	0/0:37,0:37:99:0,101,8641	0/0:7,0:7:18.02:0,18,1155	0/0:10,0:10:23.11:0,23,1172	0/0:32,0:32:93.32:0,93,10388	0/0:15,0:15:39.06:0,39,2928	0/0:14,0:14:32.47:0,32,2385	0/0:23,0:23:60.21:0,60,5120	0/0:11,0:11:27.09:0,27,3401
chr10	45589885	.	CG	C	1717.36	PASS	AB=1.000;AC=12;AF=0.214;AN=56;BaseQRankSum=8.014;DP=476;FS=17.749;HRun=3;HaplotypeScore=47.1779;InbreedingCoeff=0.7514;MQ=72.87;MQ0=0;MQRankSum=-0.292;QD=19.30;ReadPosRankSum=-0.550;VQSLOD=1.9454;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:54.16:0,54,742	0/0:8,0:8:15.05:0,15,216	0/1:6,0:6:30.43:30,0,37	0/1:9,0:9:17.61:18,0,69	0/0:10,0:10:30.10:0,30,432	0/0:20,0:20:54.16:0,54,741	0/0:30,0:30:90.27:0,90,1256	0/0:18,0:18:48.15:0,48,659	0/0:17,0:17:51.17:0,51,733	0/0:11,0:11:24.07:0,24,329	0/0:13,0:13:30.10:0,30,418	0/0:17,0:17:48.13:0,48,652	0/0:12,0:12:33.09:0,33,440	0/0:21,0:21:63.20:0,63,884	0/0:9,0:9:24.07:0,24,327	0/0:5,0:5:15.05:0,15,216	0/0:37,0:37:99:0,111,1558	0/0:26,0:26:69.23:0,69,988	1/1:5,16:21:48.14:583,48,0	1/1:1,5:6:12.04:149,12,0	1/1:5,31:36:66.14:816,66,0	0/0:12,0:12:18.04:0,18,239	0/0:6,0:6:11.52:0,12,135	0/0:52,0:52:99:0,150,2135	0/0:24,0:24:63.18:0,63,867	0/0:16,0:16:45.12:0,45,595	1/1:1,7:8:15.05:185,15,0	1/1:0,3:3:9.03:112,9,0
chr10	45591014	.	GCCA	G	1624.26	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.571;DP=747;FS=5.895;HRun=0;HaplotypeScore=104.8198;InbreedingCoeff=0.9757;MQ=71.21;MQ0=0;MQRankSum=-2.170;QD=30.65;ReadPosRankSum=0.612;VQSLOD=3.7687;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:52:99:0,123,2376	0/0:11,0:11:27.09:0,27,555	0/0:37,0:33:70.79:0,71,1267	0/0:26,0:24:55.68:0,56,986	0/0:10,0:10:23.84:0,24,493	1/1:3,22:25:51.17:742,51,0	1/1:4,24:28:69.23:1004,69,0	0/0:44,1:45:55.70:0,56,1813	0/0:29,0:29:81.28:0,81,1650	0/0:30,0:30:75.26:0,75,1498	0/0:9,0:9:24.08:0,24,461	0/0:28,0:28:72.25:0,72,1433	0/0:34,0:34:84.29:0,84,1701	0/0:20,0:20:45.14:0,45,888	0/0:29,0:28:72.25:0,72,1446	0/0:25,0:25:63.22:0,63,1247	0/0:43,0:43:99:0,108,2151	0/0:21,0:21:39.13:0,39,802	0/0:16,0:16:24.08:0,24,472	0/0:13,0:12:24.08:0,24,464	0/0:59,0:59:99:0,143,2828	0/0:32,0:32:87.30:0,87,1746	0/0:11,0:11:18.06:0,18,362	0/0:44,0:44:99:0,123,2447	0/0:16,0:16:45.15:0,45,909	0/0:23,0:23:54.17:0,54,1052	0/0:23,0:23:57.20:0,57,1153	0/0:7,0:7:12.04:0,12,200
chr10	45592213	.	GTCTC	G	247.09	PASS	AB=0.895;AC=8;AF=0.160;AN=50;BaseQRankSum=1.707;DP=470;FS=7.189;HRun=0;HaplotypeScore=89.6950;InbreedingCoeff=0.2386;MQ=71.40;MQ0=13;MQRankSum=1.827;QD=2.69;ReadPosRankSum=0.211;VQSLOD=0.9224;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:6.01:0,6,61	./.	./.	0/0:41,0:21:0.47:0,0,1	0/0:27,0:26:3.48:0,3,68	0/1:14,3:18:3.35:121,0,3	0/1:13,4:19:2.77:202,0,3	0/0:19,0:18:5.92:0,6,39	0/1:12,0:12:0.01:0,0,0	0/0:19,0:19:29.98:0,30,454	0/0:28,0:26:9.46:0,9,93	1/1:6,0:5:0.47:1,0,0	0/0:15,0:15:8.45:0,8,83	0/0:14,0:14:7.83:0,8,72	0/0:16,0:16:3:0,3,26	0/0:6,0:6:3.01:0,3,52	0/0:19,0:19:36.09:0,36,744	0/0:6,0:6:8.94:0,9,99	0/0:22,0:21:0.47:0,0,1	1/1:20,0:20:0.47:1,0,0	0/0:22,0:22:1.41:0,1,2	0/0:11,0:11:3.48:0,3,38	0/0:11,0:11:9:0,9,96	0/0:9,0:9:3.48:0,3,40	0/0:19,0:19:6.47:0,6,78	0/1:17,0:16:14.39:14,0,63	0/0:13,0:13:0.47:0,0,1	./.
chr10	45592263	.	TACACACACACACAC	T	2430.10	PASS	AB=0.789;AC=17;AF=0.340;AN=50;BaseQRankSum=4.657;DP=471;FS=7.353;HRun=0;HaplotypeScore=170.5702;InbreedingCoeff=0.5769;MQ=42.01;MQ0=23;MQRankSum=-5.779;QD=14.29;ReadPosRankSum=0.423;VQSLOD=1.8966;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:11,7:18:9.03:292,9,0	0/1:4,0:4:0:0,0,0	./.	./.	0/0:13,0:18:5.52:0,6,245	0/1:6,0:14:31.35:201,0,31	0/1:17,0:27:29.66:160,0,30	0/0:16,0:14:18.06:0,18,750	1/1:8,8:16:21.07:719,21,0	0/0:16,0:15:9.03:0,9,358	0/0:13,0:16:8.96:0,9,430	1/1:22,3:24:3.01:93,3,0	1/1:10,6:16:18.06:571,18,0	1/1:7,3:10:6.49:210,6,0	0/0:11,0:13:6:0,6,277	0/0:18,0:22:12.03:0,12,492	0/0:20,0:23:39.13:0,39,2198	0/0:8,0:12:18.53:0,19,799	0/0:13,0:12:9.03:0,9,396	0/0:17,0:18:6.47:0,6,346	0/0:14,0:14:15.05:0,15,941	1/1:21,4:24:9.03:277,9,0	./.	1/1:10,2:15:5.70:73,6,0	0/0:16,0:18:5.90:0,6,253	0/0:15,0:15:15.05:0,15,511	0/0:18,0:18:18.06:0,18,847	0/0:5,0:4:6.02:0,6,367
chr10	45593568	.	GA	G	1429.96	PASS	AB=0.903;AC=30;AF=0.536;AN=56;BaseQRankSum=-0.603;DP=559;FS=6.481;HRun=16;HaplotypeScore=82.3428;InbreedingCoeff=0.5668;MQ=53.11;MQ0=36;MQRankSum=6.120;QD=4.21;ReadPosRankSum=4.696;VQSLOD=1.1678;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:22,11:26:41.30:268,41,0	0/0:13,0:11:8.66:0,9,50	0/0:18,1:5:4.13:0,4,24	0/1:19,0:8:3.41:3,0,7	0/0:21,0:21:20.93:0,21,99	1/1:9,2:21:31.31:107,31,0	1/1:4,0:15:17.93:52,18,0	1/1:22,1:30:32.04:137,32,0	0/1:10,4:14:0.36:101,0,0	0/0:29,0:28:29.51:0,30,145	0/0:15,0:14:24.55:0,25,134	1/1:10,6:16:32.17:164,32,0	1/1:11,3:14:25.15:137,25,0	1/1:13,5:18:25.87:142,26,0	1/1:12,0:12:2.14:15,2,0	0/0:14,0:14:11.73:0,12,75	0/0:45,2:43:65.54:0,66,625	0/0:15,0:15:13.44:0,13,120	0/0:18,0:15:24.44:0,24,226	0/1:12,3:16:11.22:11,0,128	0/1:12,2:13:22.48:22,0,41	1/1:9,4:13:2.79:18,3,0	1/1:4,10:14:17.63:108,18,0	1/1:15,9:26:25.06:241,25,0	0/1:16,0:16:6.75:7,0,77	1/1:11,0:29:23.48:88,23,0	0/0:21,1:22:10.64:0,11,282	0/1:11,1:10:6.31:6,0,87
chr10	45598524	.	C	CAGAGAG	2623.91	PASS	AB=1.000;AC=39;AF=0.780;AN=50;BaseQRankSum=-0.161;DP=617;FS=4.860;HRun=0;HaplotypeScore=167.5308;InbreedingCoeff=0.2982;MQ=61.20;MQ0=8;MQRankSum=-1.849;QD=5.46;ReadPosRankSum=-1.112;VQSLOD=2.4873;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:43,0:42:21.05:408,21,0	1/1:9,0:9:3:27,3,0	./.	0/1:45,0:18:0:0,0,0	./.	1/1:18,0:17:9.21:72,9,0	1/1:23,0:23:2.98:22,3,0	1/1:30,0:30:3.45:23,3,0	1/1:24,0:24:15.51:343,16,0	1/1:27,0:27:15.05:277,15,0	1/1:12,0:12:3.01:63,3,0	1/1:17,0:17:6.88:96,7,0	0/0:19,0:19:2.21:0,2,13	1/1:23,0:23:11.97:95,12,0	1/1:14,0:14:3.01:79,3,0	0/0:28,0:28:1.71:0,2,4	0/0:26,0:28:21.06:0,21,385	1/1:19,0:19:25.61:476,26,0	1/1:16,1:19:15.01:245,15,0	./.	0/1:24,0:23:0:0,0,0	1/1:27,0:27:6.02:145,6,0	0/1:12,0:12:0:0,0,0	0/1:28,0:28:34.95:56,0,35	1/1:20,0:20:9:158,9,0	0/1:15,0:15:15.49:27,0,15	1/1:16,0:16:5.05:84,5,0	1/1:12,2:13:3.01:49,3,0
chr10	45598563	.	A	AGTGT	497.29	PASS	AB=0.916;AC=11;AF=0.196;AN=56;BaseQRankSum=8.104;DP=592;FS=0.680;HRun=0;HaplotypeScore=142.3313;InbreedingCoeff=0.2312;MQ=57.43;MQ0=9;MQRankSum=-1.654;QD=4.01;ReadPosRankSum=1.437;VQSLOD=2.6492;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:45:74.88:0,75,959	1/1:10,0:10:6.01:86,6,0	0/0:18,0:8:21.06:0,21,362	0/0:30,0:12:26.33:0,26,399	0/0:16,0:16:6.02:0,6,69	1/1:19,4:22:1.59:362,2,0	0/1:6,15:22:41.36:71,0,41	0/0:32,0:32:73.34:0,73,1132	0/0:25,0:25:9.46:0,9,423	0/0:22,0:22:44.54:0,45,562	0/0:12,0:12:10.69:0,11,120	0/0:20,0:20:33.13:0,33,424	0/0:16,0:16:9.02:0,9,126	0/0:28,0:28:63.04:0,63,763	1/1:16,0:16:2.01:14,2,0	0/0:23,0:23:16.86:0,17,190	0/0:25,0:25:69.17:0,69,1048	0/0:19,0:19:20.14:0,20,349	0/1:16,0:16:11.78:12,0,105	0/1:7,0:7:14.01:14,0,14	0/0:25,0:24:6.02:0,6,91	0/0:29,0:29:28.94:0,29,505	0/0:17,0:17:21.05:0,21,285	0/0:28,0:27:25.64:0,26,450	0/0:12,0:12:6.50:0,6,188	0/0:24,0:24:66.60:0,67,1026	0/1:15,0:15:18.54:24,0,19	0/1:15,0:14:15.60:53,0,16
chr10	45598565	.	A	AAGAGAGT	743.81	PASS	AB=0.972;AC=19;AF=0.339;AN=56;BaseQRankSum=7.718;DP=593;FS=1.191;HRun=0;HaplotypeScore=193.5438;InbreedingCoeff=-0.3744;MQ=58.73;MQ0=7;MQRankSum=-2.126;QD=2.13;ReadPosRankSum=2.098;VQSLOD=2.8149;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:47,0:45:33.86:34,0,1053	0/1:1,0:10:6.82:27,0,7	0/0:17,0:9:24.06:0,24,460	0/0:30,0:12:29.63:0,30,478	0/0:4,0:19:5.95:0,6,42	0/1:22,0:21:21.41:21,0,87	0/1:21,0:21:7.12:7,0,28	0/0:31,0:31:84.50:0,84,1352	0/1:26,0:26:63.15:63,0,505	0/1:22,0:22:48.14:48,0,152	0/1:11,0:11:52.29:54,0,52	0/1:20,0:20:26.44:26,0,472	0/1:16,0:16:24.45:24,0,66	0/0:29,0:29:59.21:0,59,836	1/1:0,1:19:3.01:84,3,0	0/1:24,0:24:28.06:28,0,73	0/0:23,0:23:66.17:0,66,1240	0/1:19,0:19:99:208,0,138	0/1:15,0:15:81.23:81,0,99	0/1:7,0:7:11.24:11,0,18	0/0:24,0:23:5.81:0,6,76	0/0:29,0:29:14.87:0,15,575	0/0:17,0:17:26.48:0,26,367	0/1:28,0:27:9.80:10,0,511	0/1:12,0:12:50.50:63,0,50	0/0:25,0:25:71.92:0,72,1084	0/1:15,0:15:19.38:65,0,19	0/1:15,0:14:46.51:47,0,95
chr10	45598567	.	A	AGTGTGT	2912.60	PASS	AB=0.953;AC=26;AF=0.464;AN=56;BaseQRankSum=4.798;DP=594;FS=2.386;HRun=0;HaplotypeScore=181.0517;InbreedingCoeff=0.2206;MQ=61.30;MQ0=7;MQRankSum=-2.615;QD=8.18;ReadPosRankSum=0.019;VQSLOD=2.8068;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:46,0:44:99:146,0,407	1/1:7,0:7:6.02:156,6,0	0/0:19,0:11:27.08:0,27,569	0/0:31,0:13:33.12:0,33,584	0/0:19,0:19:11.90:0,12,87	1/1:22,0:21:25.54:545,26,0	0/1:24,0:24:8.18:113,0,8	0/0:30,0:30:63.11:0,63,1430	0/1:26,0:26:91.79:92,0,183	0/0:22,0:22:16.82:0,17,340	0/1:10,0:10:23.52:24,0,89	0/1:19,0:19:31.58:32,0,193	0/1:7,0:16:0.24:0,0,1	0/0:28,0:28:25.62:0,26,369	1/1:17,0:17:3.01:51,3,0	0/0:24,0:24:15.27:0,15,131	0/0:22,0:22:48.16:0,48,1079	0/1:17,0:17:99:137,0,148	1/1:13,1:14:36.09:685,36,0	1/1:7,3:12:2.92:54,3,0	1/1:9,15:28:3.01:51,3,0	0/1:25,0:26:34.19:34,0,186	0/0:18,0:18:19.43:0,19,168	0/1:25,0:26:31.62:32,0,187	0/1:12,0:12:16.96:17,0,116	0/0:25,0:25:51.17:0,51,1138	1/1:2,0:17:5.51:120,6,0	1/1:14,1:14:36.11:807,36,0
chr10	45598662	.	AT	A	1216.13	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.729;DP=634;FS=3.044;HRun=3;HaplotypeScore=63.3451;InbreedingCoeff=0.9997;MQ=91.20;MQ0=0;MQRankSum=-0.691;QD=29.66;ReadPosRankSum=-0.451;VQSLOD=2.8739;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,114,1627	0/0:12,0:12:36.12:0,36,518	0/0:28,0:28:72.22:0,72,978	0/0:25,0:25:66.14:0,66,874	0/0:25,0:25:72.23:0,72,1003	1/1:0,13:13:39.12:483,39,0	1/1:3,25:28:69.22:855,69,0	0/0:23,0:23:66.20:0,66,902	0/0:18,0:18:51.14:0,51,697	0/0:24,0:24:72.24:0,72,1029	0/0:13,0:13:36.12:0,36,518	0/0:28,0:28:81.27:0,81,1166	0/0:18,0:18:51.17:0,51,734	0/0:18,0:18:51.16:0,51,716	0/0:19,0:19:51.17:0,51,734	0/0:32,0:32:93.31:0,93,1335	0/0:21,0:21:60.20:0,60,864	0/0:27,0:27:81.22:0,81,1142	0/0:16,0:16:48.16:0,48,690	0/0:14,0:14:33.11:0,33,475	0/0:43,0:43:99:0,120,1708	0/0:16,0:16:42.10:0,42,565	0/0:18,0:17:45.15:0,45,648	0/0:32,0:32:93.31:0,93,1339	0/0:20,0:20:60.19:0,60,849	0/0:28,0:28:81.27:0,81,1162	0/0:20,0:20:60.20:0,60,863	0/0:17,0:17:51.17:0,51,734
chr10	45600050	.	CTGTGTGTGTG	C	3099.33	PASS	AB=0.719;AC=17;AF=0.304;AN=56;BaseQRankSum=2.954;DP=769;FS=1.463;HRun=0;HaplotypeScore=209.5705;InbreedingCoeff=0.7729;MQ=68.08;MQ0=32;MQRankSum=-8.063;QD=14.62;ReadPosRankSum=1.938;VQSLOD=2.6007;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:31,11:42:11.75:230,12,0	0/0:12,0:15:23.57:0,24,781	0/0:91,0:28:3.48:0,3,42	0/0:95,0:28:3.90:0,4,60	0/0:18,0:21:24.08:0,24,731	0/0:15,0:16:27.09:0,27,956	0/0:28,0:29:36.59:0,37,1431	0/0:23,0:23:12.01:0,12,177	1/1:6,16:22:26.84:791,27,0	0/0:18,0:22:42.10:0,42,936	0/0:10,0:16:21.07:0,21,550	1/1:9,13:22:24.08:717,24,0	1/1:15,10:25:21.07:627,21,0	1/1:5,5:11:6.02:160,6,0	0/0:14,0:22:39.12:0,39,1216	0/1:14,1:23:65.55:66,0,653	0/0:15,0:19:40.69:0,41,1572	0/0:12,0:23:35.71:0,36,839	0/0:16,0:16:6.02:0,6,184	0/0:16,0:19:24.08:0,24,661	0/0:36,0:53:57.17:0,57,1486	1/1:13,17:33:17.90:494,18,0	1/1:10,1:18:8.08:116,8,0	1/1:11,4:15:3.01:90,3,0	0/0:13,0:22:32.84:0,33,789	0/0:8,0:14:24.07:0,24,428	0/0:16,0:24:33.11:0,33,824	0/0:5,0:12:12.04:0,12,314
chr10	45601601	.	T	TG	1539.94	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-5.464;DP=505;FS=0.645;HRun=1;HaplotypeScore=51.8318;InbreedingCoeff=0.9683;MQ=63.40;MQ0=0;MQRankSum=-0.502;QD=36.67;ReadPosRankSum=0.593;VQSLOD=3.6675;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:84.27:0,84,1089	0/0:3,0:3:9.03:0,9,117	0/0:15,0:13:33.11:0,33,422	0/0:16,0:15:42.09:0,42,500	0/0:19,0:19:51.17:0,51,661	1/1:0,13:13:36.12:539,36,0	1/1:2,27:29:75.25:1122,75,0	0/0:33,0:32:87.27:0,87,1114	0/0:13,0:13:39.13:0,39,506	0/0:14,0:14:42.14:0,42,545	0/0:17,0:17:51.16:0,51,657	0/0:20,0:20:57.18:0,57,725	0/0:11,0:11:33.11:0,33,427	0/0:10,0:10:27.09:0,27,350	0/0:23,0:23:66.21:0,66,849	0/0:21,0:21:63.20:0,63,817	0/0:40,0:40:99:0,114,1479	0/0:11,0:11:33.11:0,33,427	0/0:10,0:10:30.10:0,30,389	0/0:24,0:24:72.23:0,72,935	0/0:19,0:19:51.17:0,51,662	0/0:10,0:10:24.08:0,24,311	0/0:13,0:13:39.11:0,39,491	0/0:18,0:18:54.18:0,54,701	0/0:15,0:15:42.14:0,42,545	0/0:27,0:27:78.24:0,78,998	0/0:20,0:20:57.18:0,57,735	0/0:10,0:10:30.10:0,30,390
chr10	45604109	.	G	GT	1582.45	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-9.521;DP=561;FS=2.550;HRun=7;HaplotypeScore=60.0840;InbreedingCoeff=0.9698;MQ=84.46;MQ0=0;MQRankSum=-0.707;QD=28.77;ReadPosRankSum=-3.049;VQSLOD=3.1814;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,99,935	0/0:10,0:10:27.04:0,27,261	0/0:20,0:20:37.26:0,37,327	0/0:21,0:21:10.69:0,11,273	0/0:32,0:32:75.11:0,75,724	0/0:21,0:21:54.07:0,54,515	0/0:24,0:24:57.02:0,57,531	1/1:2,26:28:78.21:919,78,0	0/0:22,0:22:63.08:0,63,599	0/0:25,0:25:57.08:0,57,550	0/0:24,0:24:65.88:0,66,615	0/0:13,0:13:36.02:0,36,332	0/0:16,0:15:38.99:0,39,360	0/0:18,0:18:48.06:0,48,459	0/0:24,0:24:63.08:0,63,602	0/0:17,0:17:48.08:0,48,463	0/0:19,0:19:48.04:0,48,456	0/0:22,0:21:54.04:0,54,512	0/0:16,0:16:33.03:0,33,314	0/0:14,0:14:30.04:0,30,289	0/0:5,0:5:15.02:0,15,145	0/0:20,0:20:48.05:0,48,455	0/0:12,0:12:30.04:0,30,290	0/0:21,0:21:63.10:0,63,608	0/0:21,0:21:51.07:0,51,492	1/1:5,22:27:43.23:785,43,0	0/0:13,0:13:32.96:0,33,296	0/0:14,0:13:33.52:0,34,319
chr10	45604629	.	CTG	C	346.04	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.658;DP=706;FS=9.451;HRun=0;HaplotypeScore=80.3639;InbreedingCoeff=0.9994;MQ=90.83;MQ0=0;MQRankSum=-1.902;QD=28.84;ReadPosRankSum=1.157;VQSLOD=4.4897;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,117,2189	1/1:0,12:12:30.02:440,30,0	0/0:28,0:28:81.28:0,81,1488	0/0:27,0:27:72.25:0,72,1316	0/0:21,0:21:63.20:0,63,1140	0/0:21,0:21:60.21:0,60,1124	0/0:35,0:35:99:0,99,1838	0/0:33,0:33:99:0,99,1802	0/0:29,0:29:87.30:0,87,1618	0/0:25,0:25:69.23:0,69,1249	0/0:15,0:15:45.13:0,45,809	0/0:19,0:19:54.18:0,54,1000	0/0:31,0:31:87.30:0,87,1628	0/0:23,0:23:66.23:0,66,1225	0/0:24,0:24:72.23:0,72,1300	0/0:36,0:36:99:0,105,1959	0/0:27,0:27:81.28:0,81,1480	0/0:25,0:25:75.23:0,75,1354	0/0:17,0:17:51.16:0,51,872	0/0:17,0:17:51.15:0,51,911	0/0:48,0:48:99:0,138,2518	0/0:24,0:24:69.24:0,69,1264	0/0:16,0:16:48.14:0,48,842	0/0:28,0:28:78.27:0,78,1428	0/0:23,0:23:66.22:0,66,1212	0/0:23,0:23:69.24:0,69,1280	0/0:23,0:23:69.24:0,69,1292	0/0:15,0:15:45.15:0,45,843
chr10	45605184	.	A	AT	2559.04	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=7.177;DP=612;FS=0.745;HRun=12;HaplotypeScore=82.3871;InbreedingCoeff=0.9175;MQ=73.01;MQ0=1;MQRankSum=-1.247;QD=10.94;ReadPosRankSum=0.679;VQSLOD=3.3488;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,3:44:98.67:546,99,0	0/0:3,0:18:22.86:0,23,66	0/0:23,1:19:17.16:0,17,95	0/1:15,0:9:13.49:15,0,13	0/0:27,0:28:73.02:0,73,508	1/1:1,20:22:56.93:540,57,0	1/1:5,14:20:22.99:368,23,0	0/0:43,0:43:98.33:0,98,715	1/1:5,1:20:37.09:200,37,0	0/0:18,0:18:15.62:0,16,276	0/0:16,0:16:47.72:0,48,349	1/1:3,0:19:33.88:171,34,0	1/1:4,2:22:35.53:192,36,0	1/1:3,1:18:31.35:160,31,0	0/0:15,0:15:15.17:0,15,231	0/0:22,0:23:52.68:0,53,373	0/0:22,1:23:27.44:0,27,363	0/0:15,0:15:41.65:0,42,298	0/0:22,0:25:50.78:0,51,344	0/0:21,0:23:43.72:0,44,309	0/0:26,0:27:32.05:0,32,379	1/1:4,1:21:45.83:246,46,0	1/1:3,0:13:29.61:157,30,0	1/1:3,0:19:36.93:185,37,0	0/0:22,2:24:20.43:0,20,292	0/0:19,0:19:44.71:0,45,326	0/0:28,0:28:65.51:0,66,474	0/0:8,0:8:11.93:0,12,87
chr10	45607012	.	TG	T	4895.66	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=10.925;DP=652;FS=0.000;HRun=7;HaplotypeScore=68.5328;InbreedingCoeff=0.9982;MQ=83.16;MQ0=0;MQRankSum=0.447;QD=26.18;ReadPosRankSum=0.843;VQSLOD=5.4497;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,111,1381	1/1:2,7:9:21.05:214,21,0	0/0:36,0:36:80.13:0,80,899	0/0:26,1:28:36.57:0,37,617	0/0:23,0:23:63.20:0,63,791	0/0:16,0:16:48.15:0,48,603	0/0:30,0:30:87.28:0,87,1093	1/1:4,27:31:75.10:736,75,0	0/0:19,0:19:48.14:0,48,590	0/0:30,0:30:78.24:0,78,967	0/0:17,0:17:48.15:0,48,603	0/0:22,0:22:60.19:0,60,755	0/0:13,0:13:30.09:0,30,367	0/0:24,0:24:72.22:0,72,894	0/0:24,0:24:69.21:0,69,846	0/0:17,0:17:51.16:0,51,641	0/0:20,0:20:60.19:0,60,754	0/0:17,0:17:48.15:0,48,599	1/1:1,23:24:69.13:690,69,0	1/1:1,21:22:60.07:599,60,0	1/1:2,34:36:87.20:888,87,0	0/0:28,0:28:75.23:0,75,929	0/0:23,0:23:57.16:0,57,692	0/0:10,0:10:24.08:0,24,302	0/0:26,0:26:63.19:0,63,779	1/1:2,24:26:72.15:728,72,0	1/1:2,30:32:81.18:826,81,0	1/1:0,7:7:21.05:214,21,0
chr10	45612244	.	T	TG	6681.03	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-12.516;DP=618;FS=4.482;HRun=4;HaplotypeScore=56.8117;InbreedingCoeff=0.9989;MQ=75.88;MQ0=0;MQRankSum=0.466;QD=35.73;ReadPosRankSum=3.330;VQSLOD=5.4159;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,120,1338	1/1:0,11:11:27.09:368,27,0	0/0:11,0:11:23.24:0,23,292	0/0:15,0:15:23.28:0,23,354	1/1:2,17:19:51.17:693,51,0	1/1:1,15:16:39.13:532,39,0	1/1:2,19:21:54.18:739,54,0	0/0:34,0:34:81.09:0,81,875	0/0:27,0:27:78.16:0,78,847	1/1:2,27:29:84.25:1115,84,0	1/1:0,11:11:33.11:451,33,0	0/0:22,0:22:63.17:0,63,707	0/0:27,0:27:75.21:0,75,850	0/0:21,0:21:60.15:0,60,671	1/1:3,15:18:42.14:569,42,0	1/1:0,28:28:78.26:1066,78,0	0/0:29,0:29:87.24:0,87,978	1/1:1,18:19:48.16:656,48,0	0/0:21,0:21:60.15:0,60,664	0/0:22,0:22:63.16:0,63,705	0/0:47,0:47:99:0,141,1556	0/0:15,0:15:45.10:0,45,490	0/0:15,0:15:39.09:0,39,427	0/0:26,0:26:72.19:0,72,806	1/1:1,14:15:36.12:491,36,0	0/0:16,0:16:45.10:0,45,491	0/0:32,0:31:93.26:0,93,1053	0/0:9,0:9:27.08:0,27,306
chr10	45617300	.	C	CA	3636.39	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=-3.709;DP=451;FS=2.781;HRun=4;HaplotypeScore=61.7729;InbreedingCoeff=0.8671;MQ=72.84;MQ0=2;MQRankSum=0.560;QD=15.67;ReadPosRankSum=2.220;VQSLOD=2.8852;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:28.35:0,28,197	0/0:4,0:4:1.13:0,1,3	0/0:37,0:25:36.56:0,37,416	0/0:25,0:9:7.51:0,8,67	1/1:5,14:19:44.43:384,44,0	1/1:9,0:9:5.39:56,5,0	1/1:15,0:15:12:110,12,0	0/0:21,0:21:50.84:0,51,410	0/0:9,0:9:19.81:0,20,126	1/1:13,1:14:24.01:239,24,0	1/1:10,0:10:11.95:102,12,0	0/1:13,0:13:1.78:2,0,22	0/0:10,0:10:16.21:0,16,106	0/0:12,0:12:11.22:0,11,81	1/1:17,0:17:23.25:208,23,0	1/1:16,1:17:21.01:217,21,0	0/0:25,0:25:71.96:0,72,726	1/1:15,1:15:15.03:147,15,0	1/1:7,25:32:75.75:850,76,0	1/1:2,13:15:42.30:427,42,0	1/1:5,9:15:10.80:134,11,0	0/0:7,0:7:9.83:0,10,103	0/0:16,0:16:19.56:0,20,124	0/0:18,0:18:22.79:0,23,155	1/1:2,8:10:11.98:132,12,0	0/0:18,0:18:22.87:0,23,322	1/1:2,18:20:22.25:410,22,0	1/1:9,1:10:21.04:219,21,0
chr10	45617302	.	A	AAC	3617.06	PASS	AB=0.725;AC=34;AF=0.607;AN=56;BaseQRankSum=-1.241;DP=449;FS=7.564;HRun=0;HaplotypeScore=75.2983;InbreedingCoeff=0.3819;MQ=72.87;MQ0=2;MQRankSum=1.283;QD=11.48;ReadPosRankSum=2.905;VQSLOD=2.3385;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:17,0:17:2.10:2,0,151	0/0:4,0:4:8.64:0,9,26	0/0:35,0:26:32.33:0,32,515	0/0:22,0:9:10.33:0,10,92	1/1:15,0:18:47.65:417,48,0	1/1:0,1:9:5.27:53,5,0	1/1:0,13:15:12.04:216,12,0	0/0:9,0:18:50.97:0,51,461	0/1:10,0:10:18.31:18,0,73	1/1:3,8:11:4.76:224,5,0	0/1:3,6:10:3.26:95,0,3	0/1:5,0:14:17.11:37,0,17	0/1:7,0:10:12.50:13,0,74	0/1:5,0:14:27.99:28,0,56	1/1:2,17:20:24.38:430,24,0	1/1:1,16:17:20.98:316,21,0	0/0:22,0:25:64.20:0,64,888	1/1:3,12:15:15.05:293,15,0	1/1:31,0:31:13.56:468,14,0	1/1:15,0:15:37.66:258,38,0	1/1:14,0:14:1.94:48,2,0	0/0:9,0:9:4.08:0,4,75	0/1:6,0:16:6.96:7,0,87	0/1:7,0:19:4.12:4,0,100	1/1:8,1:10:11.94:147,12,0	0/0:4,0:16:22.99:0,23,377	1/1:19,0:19:11.60:166,12,0	1/1:1,8:10:21.02:378,21,0
chr10	45617966	.	C	CTGT	8574.22	PASS	AB=0.829;AC=30;AF=0.536;AN=56;BaseQRankSum=-7.988;DP=767;FS=0.420;HRun=0;HaplotypeScore=138.7092;InbreedingCoeff=0.6613;MQ=71.90;MQ0=4;MQRankSum=-1.231;QD=18.28;ReadPosRankSum=-0.248;VQSLOD=4.7073;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:27,24:52:40.25:1078,40,0	1/1:4,0:10:15.05:209,15,0	0/0:37,0:34:11.86:0,12,119	0/0:29,0:24:3.01:0,3,40	0/1:8,0:20:13.22:13,0,67	0/0:22,0:22:33.08:0,33,402	0/0:28,0:28:42.12:0,42,534	1/1:28,0:26:14.92:127,15,0	1/1:13,21:34:8:818,8,0	0/0:8,0:23:30.97:0,31,201	0/0:17,0:17:27.07:0,27,327	1/1:17,19:37:48.16:925,48,0	0/1:14,15:29:4.01:602,0,4	1/1:15,17:34:45.15:847,45,0	0/0:8,0:26:44.45:0,44,312	0/0:17,0:43:53.26:0,53,377	0/0:34,0:34:66.18:0,66,848	0/1:7,0:21:6.54:7,0,165	1/1:16,0:18:6.02:91,6,0	1/1:12,0:17:18.03:213,18,0	0/0:17,0:16:1.46:0,1,6	1/1:10,8:18:20.96:365,21,0	0/1:9,9:19:49.55:435,0,50	1/1:25,24:49:87:1664,87,0	0/0:8,0:22:20.83:0,21,147	1/1:12,1:26:29.46:376,29,0	1/1:20,1:46:42.14:568,42,0	1/1:2,0:10:18.06:235,18,0
chr10	45621085	.	CG	C	19658.95	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=9.285;DP=683;FS=6.023;HRun=2;HaplotypeScore=72.5683;InbreedingCoeff=0.9994;MQ=84.54;MQ0=0;MQRankSum=-5.142;QD=35.36;ReadPosRankSum=3.746;VQSLOD=5.3933;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,51:51:99:1828,141,0	1/1:0,11:11:27.07:350,27,0	0/0:15,0:15:37.50:0,38,601	0/0:24,0:25:46.40:0,46,911	1/1:1,9:10:27.09:350,27,0	1/1:0,26:26:69.22:894,69,0	1/1:0,26:26:78.25:1010,78,0	0/0:23,0:23:66.21:0,66,951	1/1:0,29:29:78.25:1011,78,0	1/1:1,27:28:78.25:1007,78,0	1/1:0,16:16:45.14:576,45,0	1/1:0,18:18:54.18:700,54,0	1/1:0,20:20:54.18:700,54,0	1/1:0,25:25:62.91:815,63,0	1/1:0,23:23:63.20:817,63,0	1/1:0,28:28:78.25:1012,78,0	0/0:35,0:35:99:0,99,1450	1/1:1,32:33:96.31:1241,96,0	1/1:0,17:17:45.15:583,45,0	1/1:0,19:19:51.17:660,51,0	1/1:3,39:42:99:1401,108,0	1/1:0,18:18:45.15:583,45,0	1/1:0,20:20:57.18:735,57,0	1/1:1,34:35:93.30:1207,93,0	1/1:0,30:30:87.28:1128,87,0	0/0:27,2:29:44.74:0,45,1099	1/1:0,20:20:48.15:623,48,0	1/1:0,11:11:33.11:428,33,0
chr10	45623737	.	AG	A	702.45	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.606;DP=638;FS=0.000;HRun=1;HaplotypeScore=104.5658;InbreedingCoeff=0.8891;MQ=93.35;MQ0=0;MQRankSum=-3.709;QD=35.12;ReadPosRankSum=0.651;VQSLOD=3.3953;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,147,2292	0/0:7,0:7:21.07:0,21,336	0/0:24,0:24:72.21:0,72,1103	0/0:31,0:31:87.93:0,88,1358	0/0:19,0:19:57.19:0,57,909	0/0:19,0:19:57.19:0,57,904	0/0:20,0:20:57.19:0,57,906	0/0:23,0:23:66.22:0,66,1026	0/0:23,0:23:69.24:0,69,1100	0/0:25,0:25:75.24:0,75,1153	0/0:6,0:6:15.05:0,15,240	0/0:24,0:24:72.23:0,72,1127	0/0:14,0:14:42.14:0,42,671	0/0:24,0:24:72.23:0,72,1119	0/0:22,0:22:63.21:0,63,1007	0/0:16,0:16:48.16:0,48,765	0/0:40,0:40:99:0,117,1843	0/0:26,0:26:78.27:0,78,1247	0/0:14,0:14:42.14:0,42,670	0/0:26,0:26:78.27:0,78,1247	0/0:51,0:51:99:0,154,2421	0/0:24,0:24:72.20:0,72,1080	0/0:19,0:19:54.18:0,54,854	1/1:0,20:20:57.19:797,57,0	0/0:27,0:27:81.26:0,81,1264	0/0:23,0:23:69.23:0,69,1076	0/0:20,0:20:60.20:0,60,955	0/0:2,0:2:6.02:0,6,90
chr10	45624600	.	GT	G	1401.27	PASS	AB=0.835;AC=20;AF=0.385;AN=52;BaseQRankSum=5.458;DP=804;FS=3.864;HRun=1;HaplotypeScore=154.2083;InbreedingCoeff=-0.6363;MQ=35.77;MQ0=142;MQRankSum=-7.922;QD=2.69;ReadPosRankSum=-0.689;VQSLOD=-0.4714;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:49,4:37:8.10:8,0,504	0/1:10,5:9:59.89:86,0,60	./.	./.	0/1:18,4:16:47.56:48,0,121	0/1:33,9:33:99:250,0,417	0/1:33,8:30:53.52:54,0,297	0/1:26,12:24:99:142,0,549	0/1:25,5:24:99:100,0,207	0/1:8,3:6:26.78:27,0,140	0/1:11,2:10:33.12:33,0,62	0/1:25,6:23:99:128,0,243	0/1:22,3:20:54.09:54,0,299	0/0:27,2:22:17.09:0,17,338	0/1:19,6:24:99:152,0,365	0/1:22,2:20:14.65:15,0,359	0/0:43,0:42:99:0,114,1690	0/1:12,4:15:99:126,0,280	0/0:31,2:17:0.28:0,0,487	0/0:21,4:21:38.40:0,38,431	0/0:47,3:39:13.53:0,14,591	0/1:24,9:24:58.09:58,0,430	0/1:20,9:17:99:106,0,119	0/0:35,3:34:73.43:0,73,940	0/1:12,2:11:17.76:18,0,215	0/1:22,8:26:99:101,0,544	0/1:15,3:14:36.12:36,0,224	0/1:10,1:8:7.93:8,0,120
chr10	45624887	.	AGGACCTCAGAAGACAGTGGG	A	5557.89	PASS	AB=0.945;AC=41;AF=0.759;AN=54;BaseQRankSum=-2.168;DP=522;FS=3.280;HRun=0;HaplotypeScore=165.9768;InbreedingCoeff=0.2047;MQ=54.21;MQ0=72;MQRankSum=3.043;QD=13.56;ReadPosRankSum=4.081;VQSLOD=3.4517;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:36,0:23:23.95:346,24,0	1/1:2,0:1:2.94:18,3,0	0/0:31,0:14:32.10:0,32,368	0/0:38,0:16:23.62:0,24,236	1/1:10,0:8:2.97:20,3,0	1/1:22,0:15:14.43:229,14,0	1/1:38,0:21:12.81:219,13,0	1/1:15,0:9:2.98:21,3,0	0/1:18,0:14:42.24:219,0,42	0/1:8,0:5:16.02:63,0,16	0/1:3,5:7:0:0,0,0	0/1:19,0:14:10.04:188,0,10	1/1:12,0:8:7.79:120,8,0	1/1:17,0:13:18.74:263,19,0	1/1:10,0:7:9.02:142,9,0	1/1:19,0:14:35.79:532,36,0	0/0:38,0:38:99:0,110,2309	0/1:28,0:24:46.02:469,0,46	0/1:10,0:6:20.99:21,0,39	1/1:8,4:6:5.95:55,6,0	1/1:45,0:36:36.31:1156,36,0	1/1:3,0:2:3:29,3,0	1/1:7,0:5:3:25,3,0	1/1:39,0:35:5.20:951,5,0	./.	1/1:11,0:5:12.02:152,12,0	0/1:14,0:11:22.69:182,0,23	1/1:7,0:6:11.93:139,12,0
chr10	45625325	.	A	AT	3759.91	PASS	AB=0.819;AC=48;AF=0.857;AN=56;BaseQRankSum=4.070;DP=553;FS=2.996;HRun=15;HaplotypeScore=111.9696;InbreedingCoeff=0.1540;MQ=59.70;MQ0=23;MQRankSum=-3.608;QD=7.16;ReadPosRankSum=-3.728;VQSLOD=1.7926;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:22,1:40:57.94:312,58,0	1/1:7,0:10:8.48:36,8,0	0/1:16,0:7:12.58:14,0,13	0/1:19,0:14:1.71:2,0,33	1/1:8,0:16:24.50:133,24,0	1/1:14,2:21:35.07:222,35,0	1/1:20,0:29:38.55:210,39,0	0/1:27,16:44:15.07:274,0,15	1/1:14,1:15:21.61:121,22,0	1/1:18,0:30:45.61:253,46,0	1/1:12,0:13:15.75:75,16,0	1/1:12,1:19:30.39:194,30,0	1/1:12,0:18:28.93:161,29,0	1/1:7,1:10:16.70:96,17,0	1/1:7,0:8:3.09:36,3,0	1/1:12,0:17:27.01:138,27,0	0/0:28,0:23:29.13:0,29,251	1/1:10,0:11:20.94:100,21,0	0/1:13,4:18:17.22:140,0,17	0/1:12,8:19:12.15:112,0,12	1/1:10,8:17:1.09:134,1,0	1/1:15,1:17:31.77:185,32,0	1/1:5,1:8:8.64:48,9,0	1/1:8,0:12:8.55:45,9,0	1/1:9,0:14:17.15:88,17,0	1/1:6,8:14:9.65:139,10,0	1/1:8,9:18:17.53:265,18,0	0/1:11,12:22:27.13:226,0,27
chr10	45626784	.	AT	A	1788.45	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=9.545;DP=651;FS=0.461;HRun=7;HaplotypeScore=98.3819;InbreedingCoeff=0.9922;MQ=82.10;MQ0=1;MQRankSum=-0.777;QD=18.63;ReadPosRankSum=-2.037;VQSLOD=2.7130;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:84.18:0,84,1022	0/0:8,0:8:21.07:0,21,264	0/0:27,0:25:47.39:0,47,566	0/0:22,0:20:32.72:0,33,364	0/0:26,0:26:71.56:0,72,825	1/1:5,16:21:50.38:454,50,0	1/1:3,15:18:39.50:361,40,0	1/1:11,26:37:70.35:714,70,0	0/0:21,0:21:60.18:0,60,736	0/0:30,0:30:81.24:0,81,986	0/0:18,0:18:50.80:0,51,619	0/0:18,0:18:48.14:0,48,592	0/0:16,0:16:42.11:0,42,502	0/0:28,0:28:81.25:0,81,1004	0/0:19,0:19:54.14:0,54,639	0/0:23,0:23:63.20:0,63,785	0/0:34,0:34:99:0,102,1270	0/0:27,0:27:69.22:0,69,868	0/0:22,0:22:51.12:0,51,582	0/0:18,0:18:54.17:0,54,674	0/0:16,0:16:42.12:0,42,514	0/0:29,0:29:81.26:0,81,1017	0/0:17,0:17:42.06:0,42,528	0/0:30,0:30:84.24:0,84,1024	0/0:23,0:23:66.20:0,66,813	1/1:3,17:20:13.35:417,13,0	0/0:36,0:36:93.29:0,93,1151	0/0:12,0:12:36.10:0,36,440
chr10	45629684	.	A	AT	18351.21	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-7.729;DP=661;FS=2.830;HRun=7;HaplotypeScore=57.9862;InbreedingCoeff=0.9984;MQ=73.98;MQ0=0;MQRankSum=-4.111;QD=30.18;ReadPosRankSum=2.174;VQSLOD=5.4443;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,31:33:84.26:1015,84,0	1/1:0,14:14:42.13:507,42,0	0/0:12,0:12:21.03:0,21,203	0/0:13,0:12:33.02:0,33,307	1/1:1,27:28:75.23:906,75,0	1/1:0,20:20:51.16:616,51,0	1/1:1,23:24:60.18:725,60,0	1/1:8,0:37:80.62:419,81,0	1/1:0,23:23:63.19:761,63,0	1/1:0,21:21:63.12:731,63,0	1/1:4,20:24:63.19:758,63,0	1/1:1,27:28:78.24:942,78,0	1/1:1,16:17:42.13:507,42,0	1/1:0,16:16:48.15:580,48,0	1/1:0,24:24:69.21:834,69,0	1/1:2,20:22:57.17:689,57,0	0/0:28,0:28:72.09:0,72,690	1/1:1,19:20:51.16:616,51,0	1/1:3,18:21:54.17:652,54,0	1/1:5,42:47:99:1453,123,0	1/1:2,19:21:57.17:689,57,0	1/1:1,25:26:75.23:906,75,0	1/1:0,27:27:81.25:978,81,0	1/1:2,22:24:63.19:761,63,0	1/1:2,22:24:54.17:652,54,0	1/1:5,1:22:49.13:281,49,0	1/1:2,24:25:66.20:796,66,0	1/1:1,18:19:48.15:580,48,0
chr10	45630199	.	G	GGTGGTTGTGTGTGTGT	2945.97	PASS	AB=0.987;AC=25;AF=0.446;AN=56;BaseQRankSum=9.121;DP=655;FS=24.490;HRun=0;HaplotypeScore=276.1086;InbreedingCoeff=-0.4446;MQ=70.72;MQ0=8;MQRankSum=-5.298;QD=6.79;ReadPosRankSum=1.130;VQSLOD=1.0751;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:34,0:34:31.95:32,0,108	0/1:7,0:7:27.97:126,0,28	0/0:50,0:28:49.72:0,50,906	0/0:53,0:37:39.75:0,40,964	0/0:13,0:13:6.43:0,6,43	0/1:9,0:9:12.71:52,0,13	0/1:28,0:28:48.27:151,0,48	0/1:22,0:22:73.92:183,0,74	0/1:16,8:24:99:171,0,130	0/1:22,0:22:89.58:90,0,142	0/0:10,0:10:8.89:0,9,65	0/1:28,0:28:38.64:182,0,39	1/1:17,0:17:8.36:319,8,0	0/1:33,0:33:99:197,0,146	0/1:26,0:26:13.55:14,0,138	0/1:23,0:23:99:218,0,142	0/0:39,0:39:85.48:0,85,3124	0/1:16,0:15:99:233,0,228	0/1:22,0:22:51.41:226,0,51	0/1:15,0:15:18.31:112,0,18	0/0:55,0:55:13.37:0,13,160	0/1:17,0:16:54.68:55,0,55	0/1:14,0:14:11.86:12,0,66	1/1:29,0:28:3.48:44,3,0	0/1:8,0:8:14.59:15,0,65	0/1:15,0:15:34.41:229,0,34	0/1:20,0:19:55.10:295,0,55	1/1:5,0:5:3.01:153,3,0
chr10	45630204	.	T	TTGTGTGTGTGTGTG	9243.23	PASS	AB=1.000;AC=49;AF=0.875;AN=56;BaseQRankSum=0.415;DP=752;FS=5.191;HRun=0;HaplotypeScore=287.3270;InbreedingCoeff=0.3391;MQ=63.36;MQ0=10;MQRankSum=-4.344;QD=14.58;ReadPosRankSum=1.187;VQSLOD=3.2047;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:38,0:36:20.96:240,21,0	1/1:11,0:11:16.57:314,17,0	0/0:61,0:32:25.64:0,26,581	0/0:57,0:35:49.87:0,50,960	1/1:12,0:12:5.57:48,6,0	1/1:10,0:9:9.01:177,9,0	1/1:35,0:34:15.02:319,15,0	1/1:28,0:27:44.97:801,45,0	1/1:25,0:26:17.97:300,18,0	1/1:21,0:19:24.85:523,25,0	1/1:9,0:9:8.98:72,9,0	1/1:22,0:35:14.08:646,14,0	1/1:4,0:17:9.03:364,9,0	1/1:38,0:38:47.98:717,48,0	1/1:32,0:32:29.91:344,30,0	1/1:26,0:26:30:669,30,0	0/1:42,0:42:10.29:10,0,2641	0/1:17,0:16:99:824,0,193	1/1:8,0:19:31.04:550,31,0	1/1:14,0:21:3.01:149,3,0	1/1:29,34:69:3.01:41,3,0	1/1:20,0:19:5.97:120,6,0	1/1:13,0:13:15.45:169,15,0	1/1:33,0:35:6.46:271,6,0	0/1:10,0:10:13.98:64,0,14	1/1:22,0:23:48:904,48,0	1/1:8,10:17:7.38:406,7,0	1/1:2,3:5:3.01:202,3,0
chr10	45630211	.	T	TGTGTGTGTGTGT	8819.23	PASS	AB=1.000;AC=49;AF=0.875;AN=56;BaseQRankSum=0.658;DP=726;FS=4.265;HRun=0;HaplotypeScore=252.6052;InbreedingCoeff=0.3323;MQ=54.53;MQ0=13;MQRankSum=-3.740;QD=14.60;ReadPosRankSum=-1.040;VQSLOD=3.5930;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:27,12:40:23.95:287,24,0	1/1:10,0:10:16.57:315,17,0	0/0:62,0:28:24.21:0,24,422	0/0:60,0:36:47.67:0,48,877	1/1:11,0:11:5.51:48,6,0	1/1:10,0:9:9.01:152,9,0	1/1:34,0:33:15.02:281,15,0	1/1:27,0:26:44.81:610,45,0	1/1:25,0:25:17.97:274,18,0	1/1:17,0:15:33.58:482,34,0	1/1:10,0:10:8.98:72,9,0	1/1:28,0:28:14.08:568,14,0	1/1:16,0:15:9.03:363,9,0	1/1:41,0:41:47.71:697,48,0	1/1:31,0:31:29.43:316,29,0	1/1:25,0:25:33.01:642,33,0	0/1:43,0:43:39.94:40,0,2328	0/1:17,0:16:99:806,0,179	1/1:18,0:17:32.55:629,33,0	1/1:19,0:18:3.01:176,3,0	1/1:60,0:58:6.01:81,6,0	1/1:19,0:18:5.70:117,6,0	1/1:11,0:11:14.98:169,15,0	1/1:36,0:35:9.97:385,10,0	0/1:9,0:9:49.79:64,0,50	1/1:24,0:24:47.89:776,48,0	1/1:16,0:15:5.96:315,6,0	1/1:5,0:5:3.01:157,3,0
chr10	45630255	.	CCTGT	C	1800.15	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.421;DP=669;FS=0.000;HRun=0;HaplotypeScore=140.7799;InbreedingCoeff=0.8766;MQ=58.18;MQ0=0;MQRankSum=1.867;QD=31.58;ReadPosRankSum=-1.118;VQSLOD=3.3839;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:95.43:0,95,1523	0/0:9,0:9:23.90:0,24,401	0/0:38,0:27:63.33:0,63,1147	0/0:44,0:38:96.51:0,97,1463	0/0:5,0:5:12.01:0,12,208	0/0:8,0:8:24.04:0,24,464	0/0:31,0:31:83.94:0,84,1481	1/1:4,29:33:86.96:1067,87,0	0/0:21,0:21:56.99:0,57,951	0/0:18,0:18:47.78:0,48,837	0/0:3,0:3:9.03:0,9,179	0/0:23,0:23:62.78:0,63,786	0/0:21,0:21:56.91:0,57,851	0/0:38,0:38:99:0,105,1781	0/0:26,0:26:68.89:0,69,1032	0/0:25,0:25:62.70:0,63,1255	0/0:42,0:42:99:0,123,2577	0/0:17,0:17:45.04:0,45,820	0/0:18,0:18:50.95:0,51,587	0/0:21,0:21:54.06:0,54,856	0/0:58,0:58:99:0,107,1601	0/0:19,0:19:44.50:0,45,525	0/0:10,0:10:30:0,30,411	0/0:45,0:43:89.51:0,90,1592	0/0:20,0:19:57.08:0,57,1068	1/1:1,23:24:69.03:854,69,0	0/0:13,0:13:36.09:0,36,716	0/0:2,0:2:2.98:0,3,21
chr10	45631947	.	T	TAAC	1420.96	PASS	AB=1.000;AC=16;AF=0.286;AN=56;BaseQRankSum=8.111;DP=297;FS=0.559;HRun=0;HaplotypeScore=64.7939;InbreedingCoeff=0.5266;MQ=54.75;MQ0=2;MQRankSum=-4.244;QD=10.45;ReadPosRankSum=1.417;VQSLOD=2.5634;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:51.38:0,51,587	0/1:9,0:9:2.07:127,0,2	0/0:10,0:7:14.38:0,14,106	0/0:6,0:3:5.98:0,6,67	1/1:6,0:6:11.32:54,11,0	0/0:14,0:14:17.92:0,18,202	0/0:8,0:8:2.22:0,2,7	0/1:37,0:36:38.74:463,0,39	0/0:5,0:5:12.03:0,12,160	1/1:12,0:12:12.99:119,13,0	1/1:6,0:6:8.43:36,8,0	0/0:8,0:8:21.02:0,21,232	0/0:7,0:7:21.03:0,21,252	0/0:6,0:6:18:0,18,190	0/1:5,0:5:16.09:29,0,16	0/1:8,0:8:16.06:30,0,16	0/0:26,0:26:70.72:0,71,864	1/1:22,0:22:2.81:125,3,0	0/0:15,0:14:38.96:0,39,484	0/0:8,0:8:23.97:0,24,273	0/0:6,0:6:18.04:0,18,245	0/0:2,0:2:6.02:0,6,90	0/0:5,0:5:11.81:0,12,128	0/0:1,0:1:2.96:0,3,19	1/1:11,0:11:8.89:60,9,0	1/1:5,15:20:21.47:555,21,0	0/0:11,0:11:33.04:0,33,412	0/0:3,0:3:9.03:0,9,137
chr10	45631950	.	TAATAACAAC	T	757.69	PASS	AB=1.000;AC=10;AF=0.179;AN=56;BaseQRankSum=2.640;DP=301;FS=0.000;HRun=0;HaplotypeScore=94.6968;InbreedingCoeff=0.1211;MQ=53.07;MQ0=2;MQRankSum=-3.275;QD=8.61;ReadPosRankSum=0.952;VQSLOD=1.7906;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:49.80:0,50,1317	0/0:9,0:9:11.52:0,12,348	0/0:10,0:6:12.04:0,12,188	0/0:6,0:3:6.02:0,6,163	0/1:10,0:10:35.43:35,0,390	1/1:0,14:14:21.07:627,21,0	1/1:0,8:8:3.01:72,3,0	0/0:40,0:39:20.13:0,20,1314	0/0:5,0:5:11.54:0,12,403	0/1:12,0:12:51.69:52,0,710	0/0:6,0:6:2.34:0,2,259	0/0:8,0:8:17.56:0,18,560	0/0:7,0:7:21.05:0,21,577	0/0:6,0:6:7.53:0,8,283	0/1:5,0:5:7.96:8,0,82	0/1:8,0:8:24.06:24,0,29	0/0:25,0:25:72.22:0,72,2142	0/1:20,0:20:67.72:70,0,68	0/0:15,0:14:33.98:0,34,998	0/0:8,0:8:17.02:0,17,600	0/0:6,0:6:15.52:0,16,513	0/0:2,0:2:6.02:0,6,244	0/0:5,0:5:11.53:0,12,306	0/0:2,0:2:3.01:0,3,59	0/1:11,0:11:13.99:14,0,109	0/0:20,0:20:39.64:0,40,1143	0/0:12,0:12:20.38:0,20,904	0/0:3,0:3:9.03:0,9,372
chr10	45631953	.	T	TAATAATAAC	4166.62	PASS	AB=1.000;AC=20;AF=0.357;AN=56;BaseQRankSum=-3.708;DP=333;FS=11.077;HRun=0;HaplotypeScore=90.0097;InbreedingCoeff=0.6892;MQ=54.40;MQ0=2;MQRankSum=-0.819;QD=23.95;ReadPosRankSum=-0.939;VQSLOD=1.5924;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:50.74:0,51,800	1/1:0,0:10:20.66:364,21,0	0/0:11,0:7:18.41:0,18,147	0/0:6,0:3:6:0,6,82	1/1:0,11:16:44.23:457,44,0	0/0:14,0:14:2.93:0,3,208	1/1:8,0:8:3.01:36,3,0	0/1:41,0:40:99:307,0,517	0/0:5,0:5:15.02:0,15,251	1/1:1,12:14:35.90:984,36,0	1/1:0,6:6:11.76:195,12,0	0/0:8,0:8:24.02:0,24,351	0/0:7,0:7:21.02:0,21,308	0/0:7,0:7:18.01:0,18,237	1/1:1,4:14:6.02:251,6,0	1/1:1,7:11:6.02:288,6,0	0/0:24,0:24:68.97:0,69,1142	1/1:0,19:21:18.06:796,18,0	0/0:16,0:15:34.61:0,35,662	0/0:9,0:9:26.97:0,27,389	0/0:7,0:7:21.04:0,21,348	0/0:3,0:3:9.02:0,9,161	0/0:5,0:5:14.81:0,15,199	0/0:2,0:2:5.94:0,6,42	1/1:1,11:14:9.03:399,9,0	0/1:19,0:19:88.04:88,0,162	0/0:13,0:13:36.04:0,36,573	0/0:3,0:3:9.03:0,9,209
chr10	45632629	.	TGC	T	915.40	PASS	AB=0.919;AC=18;AF=0.321;AN=56;BaseQRankSum=-1.808;DP=430;FS=1.359;HRun=0;HaplotypeScore=96.1508;InbreedingCoeff=0.5360;MQ=66.75;MQ0=11;MQRankSum=0.076;QD=6.31;ReadPosRankSum=-0.878;VQSLOD=3.0364;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:33.63:0,34,257	1/1:4,1:4:2.96:19,3,0	0/0:16,0:7:5.98:0,6,49	0/1:16,0:10:0.05:0,0,19	0/1:5,2:7:12.11:25,0,12	0/0:25,0:24:25.60:0,26,345	0/0:36,0:35:32.81:0,33,363	1/1:16,1:16:28.68:315,29,0	0/0:15,0:14:14.52:0,15,123	1/1:9,0:9:5.25:118,5,0	1/1:6,0:6:5.91:38,6,0	0/0:11,0:11:14.78:0,15,124	0/0:10,0:10:15.01:0,15,156	0/0:15,0:16:16.91:0,17,147	0/1:16,2:17:3.29:132,0,3	0/1:21,0:21:24.49:98,0,24	0/0:35,0:35:44.41:0,44,848	1/1:6,11:17:3.30:59,3,0	0/0:13,0:10:10.27:0,10,125	0/0:12,0:12:26.73:0,27,215	0/0:29,0:28:38.62:0,39,337	0/0:7,0:7:5.99:0,6,50	0/0:11,0:11:5.85:0,6,50	0/0:17,0:16:11.52:0,12,125	1/1:13,1:14:15.35:119,15,0	1/1:14,1:14:8.09:165,8,0	0/0:9,0:8:11.29:0,11,56	0/0:2,0:2:3.01:0,3,44
chr10	45632632	.	G	GCA	192.01	PASS	AB=0.993;AC=10;AF=0.179;AN=56;BaseQRankSum=4.179;DP=418;FS=9.801;HRun=0;HaplotypeScore=100.9384;InbreedingCoeff=0.1047;MQ=63.52;MQ0=15;MQRankSum=-2.104;QD=1.55;ReadPosRankSum=-2.008;VQSLOD=1.0834;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:21:27.21:27,0,341	0/1:4,0:3:0:0,0,0	0/0:14,0:5:5.98:0,6,49	0/0:15,0:9:5.58:0,6,30	0/0:7,0:7:4.72:0,5,21	0/0:25,0:24:29.63:0,30,336	0/0:36,0:35:26.76:0,27,263	0/0:18,0:16:13.39:0,13,82	0/0:14,0:13:14.17:0,14,150	0/1:10,0:10:2.44:2,0,6	0/0:7,0:6:2.29:0,2,6	0/0:9,0:9:11.64:0,12,161	0/0:8,0:8:13.66:0,14,149	0/0:13,0:13:1.30:0,1,119	0/1:18,0:17:3.32:61,0,3	0/0:18,1:19:8.34:0,8,42	0/0:34,0:34:84.22:0,84,1142	0/1:15,1:16:8.29:72,0,8	0/0:10,0:7:9:0,9,114	0/1:13,0:13:1.65:2,0,238	0/0:29,1:28:38.69:0,39,472	0/0:7,0:7:6.02:0,6,85	0/1:11,0:11:17.85:18,0,76	0/0:17,0:16:10.39:0,10,82	1/1:14,1:15:7.14:73,7,0	0/1:15,0:14:62.78:63,0,68	0/0:9,0:8:7.58:0,8,99	0/0:2,0:2:2.80:0,3,13
chr10	45632634	.	G	GCA	1253.07	PASS	AB=0.934;AC=35;AF=0.729;AN=48;BaseQRankSum=3.140;DP=431;FS=6.258;HRun=0;HaplotypeScore=108.2519;InbreedingCoeff=0.2661;MQ=53.54;MQ0=18;MQRankSum=-1.353;QD=4.02;ReadPosRankSum=-2.111;VQSLOD=1.9641;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:22:11.84:126,12,0	./.	./.	./.	0/0:12,0:12:2.84:0,3,14	0/1:26,1:25:77.72:78,0,108	1/1:35,0:33:21.06:243,21,0	0/0:18,0:16:5.32:0,5,32	1/1:12,0:11:3:26,3,0	1/1:12,0:12:10.42:55,10,0	./.	1/1:9,0:9:3:26,3,0	1/1:8,0:8:6.01:56,6,0	1/1:12,0:12:9.01:94,9,0	0/1:18,0:17:4.95:39,0,5	0/0:20,0:20:5.05:0,5,23	0/0:30,0:33:25.45:0,25,429	1/1:15,0:15:5.47:79,5,0	0/1:7,5:9:3.82:70,0,4	1/1:14,1:15:12:137,12,0	1/1:32,0:30:8.97:71,9,0	0/1:9,0:9:0:0,0,0	1/1:10,0:10:3:27,3,0	1/1:17,1:17:6:69,6,0	1/1:18,0:17:9.88:95,10,0	0/1:16,0:15:45.93:60,0,46	1/1:9,0:8:2.92:17,3,0	1/1:2,0:2:3:26,3,0
chr10	45632641	.	C	CAT	579.22	PASS	AB=0.959;AC=13;AF=0.241;AN=54;BaseQRankSum=1.723;DP=430;FS=4.091;HRun=0;HaplotypeScore=110.1273;InbreedingCoeff=-0.0413;MQ=44.27;MQ0=25;MQRankSum=0.683;QD=3.13;ReadPosRankSum=4.257;VQSLOD=1.9554;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:22:2.17:2,0,155	0/0:5,0:4:5.79:0,6,38	./.	0/0:9,0:2:2.22:0,2,7	0/0:13,0:13:8.84:0,9,73	0/1:10,14:22:45.82:166,0,46	1/1:6,32:34:27.01:440,27,0	0/0:17,0:15:41.66:0,42,352	0/0:10,0:9:1.12:0,1,34	0/0:11,0:11:26.06:0,26,188	0/0:6,0:5:2.94:0,3,18	0/1:8,0:8:0.31:0,0,63	0/1:9,0:9:10.53:11,0,39	0/1:11,0:11:14.15:24,0,14	0/0:21,0:19:7.98:0,8,150	0/0:16,0:16:17.63:0,18,142	0/0:32,0:31:59.77:0,60,798	0/1:17,0:17:15.92:16,0,63	0/0:13,0:9:0.03:0,0,97	0/1:15,0:15:27.64:28,0,58	0/0:35,0:32:29.89:0,30,239	0/0:8,0:8:2.71:0,3,25	0/0:16,0:16:4.44:0,4,47	0/1:19,0:18:14.85:15,0,17	0/1:17,0:16:7.21:7,0,63	0/0:14,0:14:29.75:0,30,261	0/0:10,0:9:7.88:0,8,53	1/1:3,0:2:1.82:5,2,0
chr10	45632658	.	A	ACG	266.74	PASS	AB=0.983;AC=23;AF=0.442;AN=52;BaseQRankSum=3.674;DP=438;FS=2.033;HRun=0;HaplotypeScore=109.8173;InbreedingCoeff=-0.0161;MQ=38.93;MQ0=56;MQRankSum=0.745;QD=1.01;ReadPosRankSum=4.061;VQSLOD=1.8548;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:20,0:17:20.23:20,0,39	0/0:4,0:3:2.99:0,3,23	./.	./.	0/0:13,0:13:5.94:0,6,58	0/1:24,0:22:3.03:3,0,204	1/1:35,0:30:2.89:65,3,0	0/1:15,0:13:47.36:47,0,53	1/1:11,0:10:2.49:9,2,0	0/0:14,0:13:28.15:0,28,168	0/0:7,1:7:2.94:0,3,18	1/1:10,0:10:2.80:13,3,0	1/1:8,0:8:4.90:18,5,0	0/1:12,0:11:10.95:20,0,11	0/1:17,0:15:3.14:3,0,41	0/0:15,0:15:11.70:0,12,102	0/0:28,0:26:57.04:0,57,691	0/1:17,0:16:38.72:39,0,42	0/0:17,0:14:18.35:0,18,214	0/1:15,0:15:22.39:34,0,22	0/0:36,0:28:10.94:0,11,80	0/1:9,0:9:0:0,0,0	1/1:13,0:13:1.14:3,1,0	0/1:22,0:18:14.95:15,0,18	0/1:17,0:16:14.26:29,0,14	0/1:10,3:13:83.82:84,0,92	0/0:13,0:12:4.31:0,4,14	1/1:5,0:4:2.04:6,2,0
chr10	45632664	.	A	ACACACACACGCACG	3999.93	PASS	AB=1.000;AC=43;AF=0.860;AN=50;BaseQRankSum=-0.437;DP=442;FS=13.635;HRun=0;HaplotypeScore=148.4245;InbreedingCoeff=0.2666;MQ=38.38;MQ0=66;MQRankSum=-3.651;QD=11.33;ReadPosRankSum=-0.334;VQSLOD=2.0464;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:19:12.51:221,13,0	1/1:4,0:3:3:25,3,0	./.	./.	1/1:13,0:13:1.93:8,2,0	0/0:24,0:22:16.14:0,16,622	0/0:35,0:30:23.74:0,24,322	0/1:15,0:12:41.39:117,0,41	1/1:3,0:13:3.01:138,3,0	1/1:13,0:12:24.31:245,24,0	./.	1/1:2,0:11:3.48:139,3,0	1/1:0,0:8:6.02:246,6,0	1/1:3,0:13:8.96:263,9,0	1/1:18,0:15:9.88:127,10,0	1/1:14,0:14:8.34:110,8,0	0/1:26,0:24:10.70:11,0,1195	1/1:16,0:14:21.91:385,22,0	1/1:20,0:16:20.44:273,20,0	1/1:14,0:14:18.02:351,18,0	1/1:36,0:27:17.77:263,18,0	1/1:9,0:9:0.40:1,0,0	1/1:4,0:13:3.01:97,3,0	1/1:24,0:18:9.13:143,9,0	1/1:16,0:15:12.03:218,12,0	0/1:13,0:12:82.60:343,0,83	1/1:1,7:11:3.48:67,3,0	1/1:1,2:5:3.01:210,3,0
chr10	45632666	.	ACG	A	232.38	PASS	AB=0.966;AC=13;AF=0.271;AN=48;BaseQRankSum=-1.194;DP=423;FS=6.769;HRun=0;HaplotypeScore=105.6814;InbreedingCoeff=-0.2963;MQ=37.39;MQ0=69;MQRankSum=0.879;QD=0.98;ReadPosRankSum=-4.705;VQSLOD=-0.0207;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:19,2:18:47.37:47,0,69	0/0:4,0:3:3.01:0,3,44	./.	./.	0/0:12,0:12:2.89:0,3,21	0/1:24,1:23:21.13:21,0,263	0/0:35,0:30:21.07:0,21,273	0/0:13,0:10:14.25:0,14,97	0/0:11,0:9:3:0,3,26	0/0:13,0:12:3.93:0,4,94	./.	0/0:9,0:9:2.67:0,3,26	0/0:6,0:6:5.60:0,6,35	0/1:11,1:10:33.52:34,0,43	0/1:18,0:15:36.69:37,0,55	0/0:14,0:14:5.94:0,6,46	0/1:26,0:23:4.78:5,0,606	0/1:16,0:14:10.29:60,0,10	0/1:20,0:16:10.40:10,0,190	0/1:13,1:14:43.67:44,0,69	0/1:35,0:26:56.34:56,0,58	./.	0/0:13,0:13:2.87:0,3,29	1/1:23,1:18:2.99:24,3,0	0/1:16,0:15:20.21:20,0,38	0/0:12,0:11:24.29:0,24,267	0/1:8,1:8:1.51:2,0,30	0/0:5,0:4:3:0,3,26
chr10	45632835	.	TA	T	1008.34	PASS	AC=24;AF=1.000;AN=24;DP=146;FS=0.000;HRun=2;HaplotypeScore=14.6447;InbreedingCoeff=-0.1214;MQ=19.38;MQ0=92;QD=18.67;VQSLOD=3.5454;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	1/1:0,2:2:6.02:75,6,0	./.	./.	1/1:0,2:2:6.02:77,6,0	1/1:0,5:3:6.02:78,6,0	./.	./.	1/1:0,4:1:3.01:37,3,0	1/1:0,11:10:24.08:309,24,0	1/1:0,5:5:3.01:39,3,0	./.	./.	./.	./.	./.	./.	./.	./.	1/1:0,2:2:6.02:78,6,0	./.	./.	1/1:0,4:3:6.02:78,6,0	./.	1/1:0,3:2:3.01:39,3,0	1/1:0,7:4:12.04:156,12,0	1/1:0,6:4:2.84:38,3,0	1/1:0,3:2:6.02:78,6,0
chr10	45633677	.	TA	T	10683.11	PASS	AC=50;AF=0.962;AN=52;BaseQRankSum=3.960;DP=528;FS=7.693;HRun=2;HaplotypeScore=71.6757;InbreedingCoeff=0.8733;MQ=39.65;MQ0=103;MQRankSum=-0.553;QD=22.97;ReadPosRankSum=2.658;VQSLOD=4.3245;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,39:34:72.23:929,72,0	1/1:2,2:4:6.02:78,6,0	./.	./.	1/1:0,13:12:18.06:233,18,0	1/1:0,16:14:27.09:350,27,0	1/1:0,20:18:39.13:505,39,0	1/1:3,21:15:42.14:545,42,0	1/1:1,20:15:21.04:271,21,0	1/1:0,13:13:39.13:506,39,0	1/1:0,18:18:27.09:349,27,0	1/1:1,14:14:21.07:272,21,0	1/1:0,17:17:36.12:467,36,0	1/1:0,19:15:36.12:466,36,0	1/1:0,25:20:36.12:467,36,0	1/1:1,21:20:51.17:661,51,0	0/0:32,0:27:51.05:0,51,671	1/1:1,23:21:39.13:506,39,0	1/1:1,13:12:36.12:467,36,0	1/1:0,17:16:36.12:467,36,0	1/1:0,36:22:57.19:739,57,0	1/1:1,11:11:18.06:233,18,0	1/1:1,15:16:24.05:311,24,0	1/1:0,25:22:36.12:467,36,0	1/1:0,15:14:27.09:350,27,0	1/1:0,16:12:36.12:466,36,0	1/1:0,15:14:27.06:345,27,0	1/1:0,8:8:18.06:234,18,0
chr10	45634161	.	CTCCT	C	6111.86	PASS	AC=50;AF=1.000;AN=50;DP=683;FS=0.000;HRun=0;HaplotypeScore=151.4387;InbreedingCoeff=-0.0335;MQ=62.51;MQ0=5;QD=9.89;VQSLOD=3.5453;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:17,22:37:39.12:578,39,0	1/1:5,0:8:6.01:56,6,0	./.	./.	1/1:10,0:22:18.02:168,18,0	1/1:9,0:21:18.01:165,18,0	1/1:19,0:29:6.01:74,6,0	./.	1/1:22,20:41:30.10:462,30,0	1/1:12,0:25:23.81:203,24,0	1/1:6,0:18:20.20:155,20,0	1/1:8,21:28:42.14:647,42,0	1/1:14,9:23:21.07:321,21,0	1/1:17,15:32:33.11:508,33,0	1/1:8,0:22:17.94:167,18,0	1/1:14,1:25:27.04:270,27,0	1/1:18,10:28:18.06:277,18,0	1/1:10,0:15:6.01:56,6,0	1/1:21,0:23:6:56,6,0	1/1:10,0:28:29.96:262,30,0	1/1:21,0:28:3:27,3,0	1/1:11,9:20:21.03:297,21,0	1/1:5,7:12:9.03:139,9,0	1/1:21,11:32:27.09:404,27,0	1/1:15,0:29:18.01:165,18,0	1/1:11,0:39:56.88:514,57,0	1/1:9,0:18:12.01:112,12,0	1/1:3,0:7:3:28,3,0
chr10	45634720	.	TCA	T	2030.07	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.714;DP=547;FS=3.390;HRun=0;HaplotypeScore=75.6280;InbreedingCoeff=0.9913;MQ=93.66;MQ0=0;MQRankSum=-1.402;QD=39.04;ReadPosRankSum=-1.802;VQSLOD=4.9237;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,123,2267	0/0:6,0:6:18.06:0,18,335	0/0:20,0:20:50.73:0,51,819	0/0:29,0:31:76.42:0,76,1246	0/0:21,0:21:63.22:0,63,1179	0/0:21,0:21:60.21:0,60,1123	0/0:22,0:22:66.23:0,66,1235	1/1:1,32:33:96.29:1356,96,0	0/0:20,0:20:60.19:0,60,1084	0/0:19,0:19:57.20:0,57,1066	0/0:11,0:11:33.11:0,33,618	0/0:26,0:26:78.27:0,78,1439	0/0:16,0:16:48.16:0,48,898	0/0:14,0:14:39.13:0,39,730	0/0:11,0:11:33.11:0,33,618	0/0:21,0:21:63.22:0,63,1180	0/0:15,0:15:42.14:0,42,780	0/0:18,0:18:54.14:0,54,960	0/0:15,0:15:45.14:0,45,812	0/0:18,0:18:54.19:0,54,1010	0/0:29,0:29:84.29:0,84,1564	0/0:19,0:19:50.86:0,51,945	0/0:12,0:12:33.11:0,33,618	0/0:18,0:18:51.17:0,51,909	0/0:19,0:19:57.18:0,57,1035	1/1:1,18:19:54.18:795,54,0	0/0:26,0:26:78.27:0,78,1451	0/0:6,0:6:18.06:0,18,337
chr10	45636125	.	TGATAGATA	T	7300.15	PASS	AB=1.000;AC=20;AF=0.357;AN=56;BaseQRankSum=-11.289;DP=804;FS=3.714;HRun=0;HaplotypeScore=252.3451;InbreedingCoeff=0.2116;MQ=59.08;MQ0=4;MQRankSum=2.836;QD=18.43;ReadPosRankSum=8.234;VQSLOD=2.7885;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:45,0:45:99:942,0,477	0/0:13,0:13:24.08:0,24,458	0/0:26,0:19:18.06:0,18,344	0/0:23,0:20:8.75:0,9,93	0/0:24,0:23:21.07:0,21,506	0/1:28,0:28:72.42:103,0,72	0/1:19,0:19:2.30:2,0,18	0/0:65,0:64:99:0,108,1459	0/1:22,0:22:99:292,0,415	0/0:35,0:35:66.22:0,66,1322	0/0:24,0:24:15.02:0,15,241	0/1:28,0:28:99:639,0,488	0/1:32,0:32:99:447,0,754	0/1:29,0:29:99:481,0,510	0/0:39,0:36:57.18:0,57,1154	0/0:38,0:36:69.23:0,69,1480	0/0:30,0:30:48.18:0,48,1682	0/0:24,0:24:54.03:0,54,828	1/1:14,15:27:45.08:742,45,0	1/1:8,16:24:39.06:608,39,0	1/1:19,0:19:39.12:652,39,0	0/1:32,0:32:99:565,0,447	0/1:18,0:18:99:552,0,165	0/1:37,0:37:99:423,0,650	0/0:28,0:26:3.01:0,3,83	0/0:39,0:36:74.83:0,75,1189	1/1:4,15:19:18.06:458,18,0	1/1:3,12:15:18.02:395,18,0
chr10	45636153	.	AGATAGATGGATGGATG	A	2498.21	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=-8.693;DP=776;FS=0.000;HRun=0;HaplotypeScore=378.8062;InbreedingCoeff=-0.0219;MQ=53.39;MQ0=7;MQRankSum=6.540;QD=6.86;ReadPosRankSum=-2.992;VQSLOD=0.8953;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:51,0:51:99:292,0,2978	0/0:12,0:12:33.06:0,33,1122	0/0:10,0:6:18.01:0,18,239	0/0:7,0:4:5.94:0,6,45	0/0:19,0:18:39.06:0,39,984	1/1:4,20:24:18.01:569,18,0	1/1:17,0:16:41.99:765,42,0	0/0:62,0:59:99:0,153,1477	0/1:27,0:27:5.76:6,0,2745	0/0:35,0:34:87.10:0,87,2553	0/0:20,0:20:15.01:0,15,292	0/1:34,0:34:99:130,0,2560	0/1:30,0:30:83.69:84,0,2920	0/1:32,0:32:63.60:64,0,3152	0/0:45,0:42:56.94:0,57,1240	0/0:39,0:37:99:0,99,3454	0/0:30,0:30:82.70:0,83,3327	0/0:26,0:26:62.67:0,63,1433	0/1:19,0:16:99:109,0,657	0/1:22,0:22:77.80:78,0,752	0/1:20,0:20:99:131,0,229	0/1:27,0:27:99:175,0,2165	0/1:26,0:26:99:115,0,1807	0/1:35,0:35:99:148,0,3292	0/0:29,0:27:3.01:0,3,162	0/0:39,0:35:95.97:0,96,1844	0/0:23,0:23:42.14:0,42,1048	0/0:15,0:16:27.09:0,27,693
chr10	45636156	.	TA	T	1623.75	PASS	AB=0.832;AC=7;AF=0.125;AN=56;BaseQRankSum=-5.854;DP=777;FS=4.744;HRun=1;HaplotypeScore=192.7194;InbreedingCoeff=-0.1204;MQ=53.18;MQ0=8;MQRankSum=-2.015;QD=7.55;ReadPosRankSum=-1.659;VQSLOD=0.1899;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:96.98:0,97,775	0/1:7,5:12:99:136,0,257	0/0:12,0:6:18.06:0,18,283	0/0:11,0:4:9.03:0,9,139	0/1:20,2:21:3.06:3,0,255	0/0:20,0:20:4.80:0,5,109	0/0:16,0:15:41.76:0,42,440	0/1:50,14:61:99:560,0,1080	0/0:24,0:24:71.05:0,71,481	0/1:35,0:34:99:247,0,689	0/1:19,0:19:9.04:9,0,91	0/0:34,0:34:87.22:0,87,546	0/0:30,0:30:77.25:0,77,516	0/0:33,0:33:94.36:0,94,605	0/0:41,4:42:31.83:0,32,786	0/1:16,23:37:99:522,0,619	0/0:30,0:30:41.13:0,41,1115	0/1:16,8:24:99:270,0,553	0/0:19,0:17:38.65:0,39,358	0/0:22,0:22:45.90:0,46,476	0/0:20,0:20:37.66:0,38,220	0/0:28,0:28:54.84:0,55,483	0/0:24,0:24:67.96:0,68,484	0/0:35,0:35:89.49:0,89,577	0/0:30,0:28:2.22:0,2,7	0/0:41,0:37:22.53:0,23,978	0/0:23,0:23:26.91:0,27,355	0/0:16,0:16:9.60:0,10,174
chr10	45636157	.	A	AGATAGAT	6102.61	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=-5.668;DP=799;FS=5.260;HRun=0;HaplotypeScore=261.7244;InbreedingCoeff=0.6464;MQ=53.05;MQ0=9;MQRankSum=-2.605;QD=17.74;ReadPosRankSum=-1.159;VQSLOD=3.4977;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:50:99:0,114,1716	0/1:12,0:12:26.86:209,0,27	0/0:13,0:6:15.05:0,15,307	0/0:14,0:4:5.80:0,6,70	1/1:11,0:22:7.52:118,8,0	0/0:20,0:20:18.06:0,18,292	0/0:17,0:16:42.14:0,42,765	0/1:67,0:64:66.89:1384,0,67	0/0:25,0:25:71.69:0,72,1025	1/1:2,33:39:99:1836,99,0	1/1:2,16:21:2.55:83,3,0	0/0:34,0:34:80.74:0,81,1382	0/0:30,0:30:75.02:0,75,1557	0/0:33,0:33:95.40:0,95,1624	1/1:25,0:42:38.09:326,38,0	1/1:39,0:37:83.47:1233,83,0	0/0:30,0:30:41.20:0,41,1602	1/1:24,0:24:33.38:464,33,0	0/0:19,0:18:48.11:0,48,821	0/0:22,0:22:54.14:0,54,915	0/0:20,0:20:36.41:0,36,762	0/0:27,0:27:78.03:0,78,1485	0/0:24,0:24:68.89:0,69,1158	0/0:35,0:35:78.30:0,78,1242	1/1:3,24:30:2.88:119,3,0	0/1:41,0:37:99:331,0,105	0/0:23,0:23:42.14:0,42,706	0/0:18,0:18:27.09:0,27,459
chr10	45636168	.	TG	T	1030.05	PASS	AB=0.802;AC=4;AF=0.071;AN=56;BaseQRankSum=2.496;DP=778;FS=7.796;HRun=2;HaplotypeScore=181.5226;InbreedingCoeff=-0.0847;MQ=52.60;MQ0=11;MQRankSum=-2.185;QD=6.09;ReadPosRankSum=-1.734;VQSLOD=-0.3637;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:47:99:0,121,1705	0/0:13,0:13:30.44:0,30,282	0/0:23,0:9:27.03:0,27,336	0/0:17,0:5:12.24:0,12,133	0/0:26,0:25:40.04:0,40,611	0/0:20,0:20:6.48:0,6,93	0/0:20,0:19:53.46:0,53,531	0/1:59,3:59:99:208,0,1496	0/0:30,0:30:90.30:0,90,1329	0/0:35,0:34:81.18:0,81,1082	0/0:15,0:15:16.94:0,17,210	0/0:29,0:29:84.28:0,84,1245	0/0:31,0:31:84.28:0,84,1233	0/0:33,0:33:96.32:0,96,1402	0/1:34,12:43:99:346,0,293	0/1:26,13:37:99:365,0,742	0/0:27,2:29:68.49:0,68,1139	0/1:13,9:22:99:219,0,392	0/0:18,0:16:48.01:0,48,623	0/0:23,0:23:57.14:0,57,778	0/0:20,0:20:46.97:0,47,647	0/0:26,0:26:75.24:0,75,1085	0/0:21,0:21:60.20:0,60,886	0/0:33,0:33:87.29:0,87,1281	0/0:25,0:23:9.03:0,9,118	0/0:36,0:32:36.97:0,37,726	0/0:23,0:23:42.13:0,42,571	0/0:15,0:15:32.59:0,33,414
chr10	45636172	.	TG	T	515.47	PASS	AB=0.735;AC=3;AF=0.054;AN=56;BaseQRankSum=6.461;DP=778;FS=0.735;HRun=2;HaplotypeScore=175.7709;InbreedingCoeff=-0.0592;MQ=52.91;MQ0=14;MQRankSum=-2.808;QD=6.78;ReadPosRankSum=-2.615;VQSLOD=-0.2124;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:48:99:0,107,1568	0/1:7,6:13:99:158,0,253	0/0:25,0:8:24.08:0,24,339	0/0:19,0:6:15.52:0,16,213	0/1:19,8:26:99:172,0,582	0/0:20,0:20:16.06:0,16,130	0/0:22,0:21:59.73:0,60,613	0/0:54,0:51:31.83:0,32,1696	0/0:30,0:30:87.29:0,87,1284	0/0:34,0:33:84.28:0,84,1222	0/0:15,0:15:17.91:0,18,246	0/0:29,0:29:84.26:0,84,1210	0/0:31,0:31:81.27:0,81,1193	0/0:32,0:32:93.31:0,93,1373	0/0:45,0:42:55.50:0,55,599	0/0:38,0:36:99:0,100,1186	0/0:30,0:30:49.40:0,49,1119	0/0:22,0:22:54.57:0,55,575	0/0:19,0:17:40.68:0,41,542	0/0:22,0:22:48.16:0,48,672	0/0:20,0:20:47.49:0,47,616	0/0:25,0:25:72.24:0,72,1057	0/0:24,0:24:69.23:0,69,1011	0/0:34,0:34:90.27:0,90,1305	0/0:25,0:23:12.04:0,12,177	0/1:24,12:32:99:286,0,668	0/0:23,0:23:45.14:0,45,613	0/0:15,0:15:32.59:0,33,414
chr10	45641647	.	AG	A	5634.67	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=0.176;DP=597;FS=2.176;HRun=9;HaplotypeScore=94.9392;InbreedingCoeff=0.9291;MQ=77.61;MQ0=0;MQRankSum=-1.452;QD=16.48;ReadPosRankSum=0.553;VQSLOD=4.9670;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:32:34.09:0,34,173	1/1:0,6:6:18.01:165,18,0	0/0:28,1:24:22.97:0,23,448	0/0:18,0:18:12.68:0,13,218	1/1:4,19:23:50.98:459,51,0	0/0:6,0:25:48.33:0,48,246	0/0:3,0:21:39.96:0,40,211	1/1:12,19:31:56.92:511,57,0	0/0:5,0:26:39.75:0,40,202	1/1:6,24:30:72.01:654,72,0	1/1:2,12:14:30.02:274,30,0	0/0:4,0:17:34.44:0,34,196	0/0:6,0:11:14.20:0,14,73	0/0:4,0:18:25.57:0,26,130	1/1:3,22:25:60.02:549,60,0	1/1:1,20:21:51.03:467,51,0	0/0:22,0:22:63.16:0,63,709	1/1:3,22:25:66.03:600,66,0	0/1:27,0:27:4.88:169,0,5	1/1:23,0:23:42.25:201,42,0	1/1:35,0:35:22.69:260,23,0	0/0:1,0:9:20.01:0,20,113	0/0:2,0:11:16.95:0,17,86	0/0:1,0:16:34.24:0,34,183	1/1:1,15:16:39.02:357,39,0	1/1:4,18:22:51.90:468,52,0	1/1:28,0:28:76.50:385,76,0	1/1:16,0:16:10.24:115,10,0
chr10	45641656	.	GA	G	4317.10	PASS	AB=0.995;AC=21;AF=0.375;AN=56;BaseQRankSum=2.114;DP=567;FS=50.025;HRun=2;HaplotypeScore=98.2895;InbreedingCoeff=0.4637;MQ=80.12;MQ0=0;MQRankSum=-1.853;QD=14.84;ReadPosRankSum=4.900;VQSLOD=1.7545;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:53.83:0,54,422	0/1:7,0:7:5.55:6,0,18	0/0:30,0:26:70.16:0,70,820	0/0:19,0:19:1.06:0,1,404	0/1:20,0:20:15.40:62,0,15	0/0:21,0:21:56.80:0,57,438	0/0:24,0:24:56.82:0,57,454	0/0:28,0:28:32.23:0,32,236	0/0:24,0:24:50.78:0,51,388	0/1:28,1:29:68.45:68,0,85	0/1:14,0:14:17.48:17,0,53	0/0:15,0:15:35.87:0,36,289	0/0:11,0:11:23.62:0,24,182	0/0:17,0:17:35.88:0,36,279	1/1:23,0:23:23.64:87,24,0	0/1:23,0:23:38.34:70,0,38	0/0:22,0:22:66.21:0,66,901	1/1:22,1:23:24.29:117,24,0	1/1:4,20:24:66.03:792,66,0	1/1:0,21:21:53.63:629,54,0	1/1:2,26:28:69.22:885,69,0	0/0:8,0:8:20.66:0,21,152	0/0:11,0:11:23.90:0,24,181	0/0:18,0:18:41.86:0,42,337	0/1:16,0:16:12.76:28,0,13	0/1:19,0:19:14.90:15,0,15	1/1:4,27:31:93.25:1139,93,0	1/1:1,12:13:33:402,33,0
chr10	45642663	.	A	AG	2356.73	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-10.259;DP=924;FS=2.267;HRun=3;HaplotypeScore=89.3878;InbreedingCoeff=0.9999;MQ=78.28;MQ0=0;MQRankSum=-1.741;QD=34.16;ReadPosRankSum=-0.116;VQSLOD=3.8403;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:56:99:0,150,1795	0/0:14,0:14:39.12:0,39,468	0/0:34,0:32:83.89:0,84,961	0/0:34,0:33:62.91:0,63,807	0/0:31,0:31:84.26:0,84,1005	1/1:1,33:34:84.28:1176,84,0	1/1:1,34:35:93.31:1302,93,0	0/0:31,0:31:75.21:0,75,882	0/0:35,0:35:99:0,102,1224	0/0:31,0:31:90.28:0,90,1080	0/0:13,0:13:36.11:0,36,432	0/0:37,0:37:99:0,108,1284	0/0:43,0:43:99:0,120,1416	0/0:42,0:42:99:0,123,1452	0/0:40,0:40:99:0,117,1404	0/0:48,0:48:99:0,132,1583	0/0:37,0:37:99:0,108,1281	0/0:37,0:37:99:0,105,1244	0/0:28,0:28:72.18:0,72,848	0/0:36,0:36:98.47:0,98,1159	0/0:58,0:58:99:0,165,1937	0/0:30,0:30:81.25:0,81,971	0/0:20,0:20:57.15:0,57,661	0/0:23,0:23:66.20:0,66,791	0/0:23,0:23:66.20:0,66,792	0/0:32,0:32:84.26:0,84,1005	0/0:21,0:21:57.17:0,57,682	0/0:21,0:21:54.16:0,54,648
chr10	45643882	.	TG	T	5560.01	PASS	AB=0.850;AC=36;AF=0.643;AN=56;BaseQRankSum=-8.666;DP=639;FS=4.029;HRun=10;HaplotypeScore=102.1087;InbreedingCoeff=0.6456;MQ=71.47;MQ0=20;MQRankSum=-2.268;QD=12.25;ReadPosRankSum=3.220;VQSLOD=4.7007;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:9,26:32:50.81:445,51,0	0/0:6,0:5:6.96:0,7,23	0/0:33,1:23:2.94:0,3,247	0/0:44,0:35:33.19:0,33,442	0/0:16,0:16:21.35:0,21,63	1/1:4,0:24:18.80:55,19,0	1/1:3,0:31:32.19:95,32,0	0/1:2,0:18:7.02:23,0,7	1/1:4,17:20:50.98:442,51,0	0/1:23,1:24:31.12:31,0,50	0/1:11,0:11:1.82:2,0,14	1/1:3,21:24:56.99:495,57,0	1/1:5,16:20:47.99:417,48,0	1/1:2,21:23:59.99:521,60,0	0/0:24,0:23:18.45:0,18,80	0/0:14,1:15:15.52:0,16,52	0/1:18,2:20:8.47:8,0,341	0/0:28,0:28:55.05:0,55,165	1/1:11,7:14:20.68:170,21,0	1/1:6,16:20:42.61:409,43,0	1/1:9,46:52:99:1070,128,0	1/1:4,12:15:32.87:275,33,0	1/1:4,8:11:20.99:182,21,0	1/1:5,11:13:3.03:138,3,0	0/0:17,1:18:3.41:0,3,52	1/1:9,0:22:18.23:58,18,0	1/1:2,19:17:44.88:376,45,0	1/1:0,16:15:41.86:347,42,0
chr10	45643883	.	G	GT	5868.58	PASS	AB=0.977;AC=28;AF=0.500;AN=56;BaseQRankSum=-6.827;DP=631;FS=3.989;HRun=1;HaplotypeScore=102.9567;InbreedingCoeff=0.8768;MQ=72.48;MQ0=20;MQRankSum=-1.749;QD=18.93;ReadPosRankSum=1.849;VQSLOD=5.2763;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,2:33:66.15:0,66,354	1/1:0,6:5:9.03:118,9,0	0/0:32,0:23:22.74:0,23,307	0/0:43,0:36:35.78:0,36,484	1/1:1,15:16:35.97:453,36,0	0/0:23,0:23:38.07:0,38,249	0/0:30,0:30:52.94:0,53,330	0/0:18,0:18:45.44:0,45,278	0/1:20,1:20:3.23:3,0,153	1/1:1,20:21:48.88:655,49,0	1/1:1,11:12:17.97:223,18,0	0/0:24,0:24:31.28:0,31,221	0/0:18,1:18:48.85:0,49,224	0/0:23,0:23:46.70:0,47,217	1/1:0,22:21:48.16:669,48,0	1/1:1,15:16:30.10:418,30,0	0/0:19,0:19:53.37:0,53,578	1/1:0,28:28:75.25:1044,75,0	1/1:16,3:15:37.82:271,38,0	1/1:17,3:18:51.47:308,51,0	1/1:54,2:52:98.28:738,98,0	0/1:17,0:16:0.36:0,0,97	0/0:13,0:12:2.14:0,2,116	0/0:13,3:13:19.83:0,20,115	1/1:2,16:18:27.94:491,28,0	0/0:22,1:22:59.53:0,60,421	1/1:21,1:17:46.25:261,46,0	1/1:16,0:15:40.25:216,40,0
chr10	45645305	.	ACGCGCGCGCG	A	1456.75	PASS	AB=0.921;AC=14;AF=0.259;AN=54;BaseQRankSum=-2.339;DP=479;FS=10.838;HRun=0;HaplotypeScore=160.0511;InbreedingCoeff=0.2716;MQ=59.60;MQ0=1;MQRankSum=-0.968;QD=7.83;ReadPosRankSum=0.748;VQSLOD=1.7880;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:37:17.16:0,17,289	0/1:5,0:5:15.35:15,0,81	1/1:6,0:5:0.89:2,1,0	./.	0/0:17,0:19:1.59:0,2,381	0/1:16,0:15:2.47:196,0,2	0/1:25,4:30:45.93:207,0,46	1/1:13,7:19:12:294,12,0	0/0:10,0:10:5.92:0,6,33	0/0:15,0:15:30.10:0,30,796	0/0:7,0:7:10.06:0,10,137	0/0:9,0:9:17.53:0,18,336	0/0:13,0:15:11.43:0,11,348	0/0:12,0:12:14.81:0,15,211	0/0:15,0:15:18.04:0,18,385	0/0:12,0:12:15.03:0,15,616	0/0:36,0:35:78.15:0,78,2757	0/0:24,0:23:42.48:0,42,662	0/0:11,0:9:6.02:0,6,69	1/1:15,0:15:7.02:193,7,0	1/1:26,2:29:6.46:50,6,0	0/1:21,0:20:17.64:18,0,303	0/0:18,0:18:6.11:0,6,18	0/0:19,0:19:18.05:0,18,390	0/0:12,0:12:19.73:0,20,252	0/1:16,1:25:99:270,0,223	0/1:17,1:18:99:365,0,190	0/0:9,0:8:11.29:0,11,74
chr10	45645319	.	G	GCA	382.82	PASS	AB=0.951;AC=14;AF=0.259;AN=54;BaseQRankSum=3.222;DP=472;FS=9.001;HRun=0;HaplotypeScore=124.1773;InbreedingCoeff=0.3451;MQ=50.06;MQ0=4;MQRankSum=-3.900;QD=2.15;ReadPosRankSum=-2.181;VQSLOD=1.4239;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:29.59:0,30,267	0/0:5,0:5:6.01:0,6,70	0/0:2,0:2:0:0,0,0	./.	0/0:24,0:23:28.37:0,28,259	1/1:12,0:12:13.24:85,13,0	1/1:24,0:23:18.51:113,19,0	0/1:18,0:15:17.16:17,0,63	0/0:9,0:9:3.88:0,4,27	0/0:18,0:18:37.38:0,37,350	0/0:8,0:8:11.84:0,12,86	0/0:11,0:11:17.03:0,17,137	0/0:12,0:12:17.49:0,17,154	0/0:12,0:12:9.21:0,9,75	0/0:16,0:16:4.25:0,4,55	0/0:15,0:15:0.05:0,0,66	0/0:30,0:29:80.94:0,81,992	0/0:27,0:26:41.39:0,41,396	0/1:9,2:9:57.79:58,0,73	1/1:12,1:14:4.98:49,5,0	1/1:21,1:22:5.67:49,6,0	0/0:24,0:23:22.54:0,23,209	0/1:20,0:20:0.01:0,0,0	0/0:22,0:21:13.05:0,13,82	0/0:14,0:14:20.26:0,20,169	0/1:28,0:27:1.36:1,0,196	0/1:14,1:15:20.66:109,0,21	0/1:11,1:11:30.13:52,0,30
chr10	45645325	.	G	GCACA	1997.85	PASS	AB=0.870;AC=32;AF=0.615;AN=52;BaseQRankSum=5.186;DP=465;FS=2.886;HRun=0;HaplotypeScore=127.8987;InbreedingCoeff=-0.1193;MQ=49.26;MQ0=5;MQRankSum=0.190;QD=4.85;ReadPosRankSum=-1.027;VQSLOD=2.5883;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:22,15:38:4.15:8,0,4	0/1:7,0:7:1.75:39,0,2	./.	./.	0/1:25,0:25:15.86:159,0,16	1/1:13,0:13:14.95:163,15,0	1/1:20,0:18:8.57:95,9,0	0/1:18,0:15:68.63:84,0,69	1/1:2,6:8:2.51:7,3,0	0/1:9,0:19:32.77:54,0,33	0/0:4,0:7:3.32:0,3,23	1/1:5,4:11:1.67:67,2,0	0/1:12,1:13:19.29:65,0,19	1/1:2,9:11:2.02:72,2,0	1/1:6,0:21:10.23:103,10,0	1/1:4,0:18:13.30:136,13,0	0/0:28,0:27:69.17:0,69,1254	0/1:14,0:27:48.70:49,0,60	0/1:10,0:8:68.52:191,0,69	1/1:13,0:13:1.18:9,1,0	0/1:23,0:23:0:0,0,0	0/1:11,9:20:7.81:70,0,8	0/1:6,9:19:0:0,0,0	1/1:5,14:22:9.01:123,9,0	0/0:8,1:13:10.20:0,10,36	0/1:26,0:25:97.58:381,0,98	0/1:15,0:15:19.88:170,0,20	0/1:10,0:9:34.27:99,0,34
chr10	45645959	.	TACACACACAC	T	4174.79	PASS	AB=0.815;AC=29;AF=0.558;AN=52;BaseQRankSum=4.444;DP=606;FS=1.432;HRun=0;HaplotypeScore=171.7446;InbreedingCoeff=0.7632;MQ=55.70;MQ0=22;MQRankSum=-5.432;QD=13.17;ReadPosRankSum=1.675;VQSLOD=2.6903;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:26,8:34:12.04:346,12,0	0/0:5,0:8:12.03:0,12,209	./.	./.	1/1:13,0:19:12.01:111,12,0	0/0:13,0:12:3.01:0,3,129	0/0:27,0:27:12.04:0,12,396	0/0:14,0:14:7.84:0,8,170	1/1:12,10:22:24.08:710,24,0	0/1:17,0:21:45.12:76,0,45	1/1:14,0:21:11.99:110,12,0	1/1:8,3:12:12.04:297,12,0	1/1:9,7:16:14.30:406,14,0	1/1:19,4:24:12.04:284,12,0	1/1:10,1:20:15.03:204,15,0	1/1:9,3:15:18.04:297,18,0	0/0:15,0:21:36.11:0,36,1412	1/1:16,0:19:5.22:83,5,0	0/0:15,0:12:10.59:0,11,396	0/0:20,0:19:5.85:0,6,287	0/0:28,0:38:9.03:0,9,313	1/1:12,10:22:18.06:462,18,0	1/1:15,9:25:18.06:419,18,0	1/1:11,8:20:9.03:207,9,0	1/1:13,0:23:7.28:163,7,0	0/0:13,0:18:24.91:0,25,414	0/0:18,0:16:18.06:0,18,676	0/0:8,0:11:9.03:0,9,356
chr10	45646005	.	C	CACAGAG	118.01	PASS	AB=1.000;AC=6;AF=0.107;AN=56;BaseQRankSum=1.782;DP=630;FS=2.708;HRun=0;HaplotypeScore=168.4694;InbreedingCoeff=0.4875;MQ=70.15;MQ0=8;MQRankSum=-1.532;QD=1.66;ReadPosRankSum=-1.963;VQSLOD=2.6401;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:45.62:0,46,711	0/0:11,0:10:18.05:0,18,251	0/0:26,0:23:62.07:0,62,1019	0/0:31,0:26:40.65:0,41,909	0/0:18,0:18:34.06:0,34,545	1/1:0,0:18:3.01:94,3,0	1/1:0,21:21:3.01:112,3,0	0/0:30,0:29:80.12:0,80,1227	0/0:21,0:21:48.15:0,48,778	0/0:22,0:20:58.68:0,59,861	0/0:17,0:17:36.12:0,36,580	0/0:17,0:17:48.13:0,48,721	0/0:20,0:20:44.69:0,45,709	0/0:24,0:24:49.06:0,49,809	0/0:31,0:31:66.20:0,66,1066	0/0:17,0:17:42.11:0,42,661	0/0:30,0:30:75.20:0,75,1371	0/0:22,0:22:60.18:0,60,853	0/0:16,0:15:42.13:0,42,647	0/1:19,0:19:3.29:3,0,498	0/0:53,0:50:71.12:0,71,1116	0/0:23,0:23:51.17:0,51,780	0/0:18,0:18:36.09:0,36,506	0/0:27,0:27:44.95:0,45,698	0/0:22,0:22:48.16:0,48,809	0/0:20,0:20:58.42:0,58,929	0/1:13,0:12:14.72:15,0,314	0/0:13,0:13:26.55:0,27,432
chr10	45646723	.	AAGAGAGAGAG	A	3541.45	PASS	AB=1.000;AC=18;AF=0.346;AN=52;BaseQRankSum=3.337;DP=570;FS=5.003;HRun=0;HaplotypeScore=182.1969;InbreedingCoeff=0.7851;MQ=53.52;MQ0=18;MQRankSum=-3.928;QD=16.55;ReadPosRankSum=1.590;VQSLOD=2.1039;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:25:26.95:351,27,0	0/0:7,0:6:5.98:0,6,47	./.	./.	0/0:25,0:22:2.87:0,3,337	0/1:22,0:22:26.91:27,0,227	0/0:14,0:14:13.84:0,14,196	0/0:26,0:26:34.50:0,34,523	1/1:20,0:19:19.28:457,19,0	0/0:19,0:19:27.27:0,27,341	0/1:16,0:16:3.01:3,0,156	1/1:23,0:23:37.12:675,37,0	1/1:21,0:20:26.98:517,27,0	1/1:17,0:17:23.95:422,24,0	0/0:26,0:26:42.13:0,42,1236	0/0:17,0:17:9.02:0,9,106	0/0:18,0:21:36.07:0,36,1118	0/0:16,0:16:29.92:0,30,338	0/0:20,0:19:25.89:0,26,663	0/0:20,0:19:11.39:0,11,351	0/0:19,0:17:14.39:0,14,387	1/1:14,8:22:18.01:331,18,0	1/1:22,0:22:14.96:243,15,0	1/1:23,0:22:30.02:517,30,0	0/0:23,0:23:22.73:0,23,397	0/0:28,0:29:47.33:0,47,1186	0/0:26,0:24:18.06:0,18,703	0/0:15,0:15:30.08:0,30,665
chr10	45646761	.	GAGAGAGAA	G	840.99	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=7.745;DP=580;FS=4.321;HRun=0;HaplotypeScore=185.3301;InbreedingCoeff=0.1692;MQ=62.18;MQ0=17;MQRankSum=-3.883;QD=5.22;ReadPosRankSum=4.654;VQSLOD=2.0565;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:22:5.37:0,5,223	0/0:9,0:8:15.49:0,15,161	0/0:17,0:11:9.33:0,9,217	0/0:33,0:21:30.11:0,30,398	0/0:20,0:17:40.06:0,40,415	1/1:6,21:27:9.02:130,9,0	1/1:11,0:11:20.93:280,21,0	0/0:33,0:33:87.97:0,88,726	0/1:15,0:14:99:113,0,200	0/0:24,0:23:57.44:0,57,650	0/0:17,0:15:34.98:0,35,305	0/1:19,0:19:99:127,0,243	0/1:19,0:18:99:119,0,247	0/1:15,0:15:99:103,0,201	0/0:22,0:21:56.11:0,56,1063	0/0:17,0:16:48.07:0,48,517	0/0:24,0:24:53.80:0,54,1063	0/0:28,0:28:70.11:0,70,705	0/0:14,0:13:35.98:0,36,564	0/0:24,0:23:35.78:0,36,404	0/0:20,0:18:26.88:0,27,395	0/1:21,0:21:14.94:15,0,268	0/1:9,0:9:36.30:36,0,80	0/1:25,0:24:73.96:74,0,185	0/0:22,0:22:42.92:0,43,396	0/0:31,0:31:86.17:0,86,1192	0/0:20,0:18:32.64:0,33,630	0/0:18,0:18:53.83:0,54,665
chr10	45647432	.	C	CTGTATGTA	16557	PASS	AB=0.585;AC=49;AF=0.875;AN=56;BaseQRankSum=-0.301;DP=716;FS=1.875;HRun=0;HaplotypeScore=224.5470;InbreedingCoeff=0.6363;MQ=52.91;MQ0=4;MQRankSum=-1.102;QD=25.75;ReadPosRankSum=2.410;VQSLOD=4.2485;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:42.14:0,42,989	1/1:7,0:12:10.09:219,10,0	0/0:29,0:20:6.01:0,6,101	0/0:22,0:13:12.04:0,12,194	1/1:20,10:32:3.01:123,3,0	1/1:19,0:32:17.96:148,18,0	1/1:12,0:25:32.88:264,33,0	1/1:33,0:33:39.11:883,39,0	1/1:9,0:25:44.92:379,45,0	1/1:21,13:36:66.21:2270,66,0	1/1:14,8:24:14.65:515,15,0	1/1:11,0:21:29.90:239,30,0	1/1:9,0:22:35.91:291,36,0	1/1:7,0:24:44.86:362,45,0	1/1:17,14:33:39.13:1529,39,0	1/1:15,19:35:51.16:1974,51,0	1/1:10,0:28:34.63:337,35,0	1/1:15,5:21:21.07:833,21,0	1/1:11,8:20:30.08:933,30,0	1/1:19,11:31:11.47:470,11,0	1/1:18,5:26:8.88:156,9,0	1/1:4,0:18:26.94:220,27,0	0/1:7,0:23:27.49:328,0,27	1/1:5,0:17:7.40:242,7,0	1/1:18,11:30:18.06:725,18,0	1/1:24,10:36:6.26:1670,6,0	1/1:12,15:27:30.10:1200,30,0	1/1:5,6:11:6.02:246,6,0
chr10	45648105	.	GA	G	5776.18	PASS	AB=0.782;AC=17;AF=0.304;AN=56;BaseQRankSum=20.391;DP=1086;FS=3.890;HRun=1;HaplotypeScore=163.8573;InbreedingCoeff=-0.4348;MQ=67.52;MQ0=3;MQRankSum=-13.699;QD=7.47;ReadPosRankSum=-6.975;VQSLOD=-0.7608;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:29,10:39:99:166,0,1049	0/1:13,3:16:88.18:88,0,438	0/0:28,0:27:77.57:0,78,1140	0/0:16,0:15:45.13:0,45,645	0/0:27,5:32:78.70:0,79,1195	0/1:36,13:49:99:500,0,954	0/1:34,24:58:99:361,0,1035	0/0:30,0:29:87.29:0,87,1372	0/1:30,23:53:99:662,0,968	0/1:33,8:41:88.38:88,0,1305	0/0:20,0:20:60.19:0,60,937	0/1:39,21:60:99:480,0,1383	0/1:32,18:50:99:594,0,1040	0/1:42,23:65:99:718,0,1230	0/1:39,24:63:99:764,0,1362	0/1:40,19:59:99:651,0,1209	0/0:44,0:44:99:0,107,1964	0/1:26,10:35:99:208,0,830	0/0:24,0:23:69.22:0,69,1062	0/0:25,0:25:72.25:0,72,1151	0/0:49,0:49:99:0,148,2343	0/1:22,5:27:53.29:53,0,935	0/1:16,5:21:68.36:68,0,711	0/1:41,14:55:99:212,0,1359	0/1:34,7:41:15.23:15,0,1337	0/1:33,7:40:99:146,0,1373	0/0:34,0:34:99:0,102,1578	0/0:11,0:11:33.11:0,33,527
chr10	45648892	.	CATAT	C	1931.55	PASS	AB=0.564;AC=3;AF=0.056;AN=54;BaseQRankSum=10.070;DP=359;FS=4.211;HRun=0;HaplotypeScore=71.4164;InbreedingCoeff=0.4895;MQ=70.93;MQ0=1;MQRankSum=-8.955;QD=36.44;ReadPosRankSum=-0.722;VQSLOD=3.3266;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:51.18:0,51,1351	0/0:1,0:1:3.01:0,3,80	0/0:18,0:15:33.80:0,34,836	0/0:12,0:9:9.78:0,10,388	0/0:10,0:10:30.10:0,30,791	0/0:17,0:17:48.15:0,48,1159	0/0:5,0:5:15.05:0,15,400	1/1:9,22:31:67.87:1191,68,0	0/0:11,0:11:33.10:0,33,825	0/0:15,0:14:42.14:0,42,1120	0/0:7,0:7:21.07:0,21,556	0/0:7,0:7:18.06:0,18,480	0/0:11,0:11:33.11:0,33,869	0/0:8,0:8:24.08:0,24,640	0/0:13,0:13:39.12:0,39,974	0/0:7,0:7:21.06:0,21,505	0/0:16,0:16:48.16:0,48,1268	0/0:24,0:24:66.23:0,66,1740	0/0:27,0:27:81.28:0,81,2151	0/0:3,0:3:6.02:0,6,160	0/0:10,0:10:27.09:0,27,720	./.	0/0:3,0:3:9.01:0,9,170	0/0:15,0:15:45.15:0,45,1178	0/0:15,0:15:45.15:0,45,1185	0/1:5,17:22:28.02:846,0,28	0/0:15,0:15:45.15:0,45,1166	0/0:18,0:18:48.16:0,48,1256
chr10	45649183	.	C	CTTAT	1303.59	PASS	AB=1.000;AC=15;AF=0.341;AN=44;BaseQRankSum=-5.202;DP=321;FS=0.000;HRun=0;HaplotypeScore=58.0750;InbreedingCoeff=0.6848;MQ=63.86;MQ0=1;MQRankSum=0.603;QD=12.78;ReadPosRankSum=-0.918;VQSLOD=2.2985;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:15.01:0,15,204	./.	./.	./.	0/0:10,0:10:9.02:0,9,117	0/0:7,0:18:30.03:0,30,279	0/1:4,0:8:12.12:12,0,20	0/0:33,0:31:1.41:0,1,3	0/0:14,0:14:15.04:0,15,209	1/1:7,0:11:12.01:170,12,0	1/1:7,0:8:6:61,6,0	0/0:8,0:8:12.03:0,12,163	0/0:13,0:13:12.03:0,12,163	0/0:6,0:6:6.02:0,6,92	0/0:11,0:11:12.04:0,12,185	0/0:12,0:12:18.04:0,18,236	0/0:29,0:29:33.11:0,33,507	0/0:20,0:20:36.09:0,36,528	1/1:13,0:12:3:27,3,0	1/1:5,1:6:3.01:70,3,0	./.	./.	./.	0/0:3,0:3:3.01:0,3,46	1/1:10,4:14:12.04:281,12,0	0/0:9,0:16:20.99:0,21,187	1/1:13,7:22:18.06:421,18,0	1/1:11,9:20:18.06:421,18,0
chr10	45651114	.	G	GC	19662.63	PASS	AB=0.721;AC=36;AF=0.643;AN=56;BaseQRankSum=-8.009;DP=694;FS=0.000;HRun=0;HaplotypeScore=76.4854;InbreedingCoeff=0.8447;MQ=78.33;MQ0=0;MQRankSum=-3.579;QD=41.14;ReadPosRankSum=-0.267;VQSLOD=5.1181;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,44:44:99:1918,120,0	1/1:0,13:13:39.13:623,39,0	0/0:20,0:19:36.13:0,36,552	0/0:11,0:11:33.09:0,33,429	0/0:15,0:15:45.15:0,45,629	1/1:1,18:19:45.15:719,45,0	1/1:1,31:32:90.31:1439,90,0	1/1:3,37:40:99:1628,105,0	1/1:0,23:23:69.24:1103,69,0	0/0:34,0:34:99:0,99,1340	0/0:20,0:20:60.19:0,60,820	1/1:0,23:23:66.23:1053,66,0	1/1:0,17:17:39.13:624,39,0	1/1:1,20:21:60.20:953,60,0	0/0:29,0:29:87.28:0,87,1198	0/1:20,2:22:32.73:33,0,734	0/0:39,0:39:99:0,117,1635	0/0:22,0:22:63.21:0,63,881	1/1:1,31:32:90.31:1434,90,0	1/1:2,13:15:24.08:384,24,0	1/1:0,49:49:99:2158,135,0	1/1:0,18:18:51.17:812,51,0	1/1:0,14:14:33.11:527,33,0	1/1:0,34:34:93.32:1487,93,0	0/0:26,0:26:69.20:0,69,931	0/1:2,19:21:20.73:848,0,21	1/1:0,21:20:63.21:1007,63,0	1/1:1,19:20:57.19:911,57,0
chr10	45652577	.	TCGCAGGGTCTCTG	T	40074.45	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=16.054;DP=646;FS=0.728;HRun=0;HaplotypeScore=274.2130;InbreedingCoeff=0.9713;MQ=79.85;MQ0=0;MQRankSum=-16.798;QD=81.29;ReadPosRankSum=5.490;VQSLOD=4.3340;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,27:27:48.16:1866,48,0	1/1:1,8:9:18.06:704,18,0	0/0:32,0:32:93.32:0,93,4607	0/0:16,0:16:48.16:0,48,2437	1/1:1,20:21:18.03:736,18,0	0/0:24,0:24:72.23:0,72,4429	0/0:37,0:37:99:0,111,6842	1/1:0,21:21:60.15:1820,60,0	1/1:1,12:13:27.09:1105,27,0	1/1:0,25:26:78.22:2952,78,0	1/1:1,11:12:12.04:478,12,0	1/1:0,33:33:75.73:3058,76,0	1/1:0,19:19:57.20:2283,57,0	1/1:0,26:26:66.23:2700,66,0	1/1:0,23:23:60.21:2443,60,0	1/1:1,27:28:72.25:2878,72,0	0/0:44,0:44:99:0,126,7537	1/1:1,24:25:66.22:2531,66,0	1/1:3,10:13:33.10:956,33,0	1/1:1,13:14:27.09:938,27,0	1/1:4,30:34:15.05:390,15,0	1/1:1,19:20:30.10:1227,30,0	1/1:3,13:16:24.08:825,24,0	1/1:0,28:28:39.13:1430,39,0	1/1:0,24:24:57.19:2168,57,0	1/1:0,33:33:99:3735,99,0	1/1:0,24:24:63.22:2566,63,0	1/1:0,4:4:9.03:284,9,0
chr10	45654391	.	TC	T	15641.45	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=10.768;DP=661;FS=2.053;HRun=1;HaplotypeScore=72.1779;InbreedingCoeff=0.9999;MQ=68.04;MQ0=0;MQRankSum=-1.390;QD=39.20;ReadPosRankSum=1.916;VQSLOD=5.6264;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,46:46:99:1719,123,0	0/0:17,0:17:48.11:0,48,723	0/0:18,0:18:53.39:0,53,813	0/0:22,0:22:66.22:0,66,1015	0/0:22,0:22:63.20:0,63,980	0/0:24,0:24:66.22:0,66,1045	0/0:19,0:19:57.18:0,57,888	1/1:0,31:31:90.26:1207,90,0	1/1:0,25:25:69.23:965,69,0	0/0:18,0:18:54.18:0,54,844	0/0:16,0:16:48.16:0,48,763	1/1:0,23:23:66.22:923,66,0	1/1:0,27:27:78.26:1090,78,0	1/1:0,15:15:45.15:629,45,0	0/0:25,0:25:75.26:0,75,1197	0/0:15,0:15:42.14:0,42,671	0/0:31,0:31:93.29:0,93,1433	0/0:18,0:18:54.18:0,54,863	1/1:0,17:17:51.15:695,51,0	1/1:0,10:10:30.10:420,30,0	1/1:0,47:47:99:1886,135,0	1/1:0,26:26:72.24:1007,72,0	1/1:0,17:17:39.58:544,40,0	1/1:0,35:35:96.32:1342,96,0	0/0:17,0:17:51.17:0,51,815	1/1:0,31:31:93.30:1281,93,0	1/1:0,33:33:96.05:1304,96,0	1/1:0,16:16:45.15:629,45,0
chr10	45654717	.	TA	T	13050.55	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=10.025;DP=665;FS=27.663;HRun=8;HaplotypeScore=67.8325;InbreedingCoeff=0.9991;MQ=68.24;MQ0=0;MQRankSum=-2.359;QD=24.08;ReadPosRankSum=4.181;VQSLOD=3.3650;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,39:40:99:1043,108,0	1/1:2,10:12:27:261,27,0	0/0:16,0:15:36.09:0,36,414	0/0:18,0:16:32.47:0,32,323	1/1:1,26:27:72.11:695,72,0	0/0:27,0:27:66.33:0,66,883	0/0:29,0:29:84.15:0,84,980	1/1:5,21:26:60.01:566,60,0	1/1:4,23:27:63.10:608,63,0	1/1:4,24:28:72.09:687,72,0	1/1:1,18:19:51.08:492,51,0	1/1:1,22:23:57.09:550,57,0	1/1:0,19:19:57.09:550,57,0	1/1:2,22:24:60.09:579,60,0	1/1:2,30:32:81.13:782,81,0	1/1:3,18:21:51.08:492,51,0	0/0:33,0:33:93.23:0,93,1093	1/1:3,12:15:33.05:319,33,0	1/1:2,17:19:51.07:487,51,0	1/1:3,12:15:36.02:339,36,0	1/1:2,15:17:39.06:377,39,0	1/1:3,17:20:48.07:463,48,0	1/1:3,19:22:51.08:492,51,0	1/1:4,26:30:72.11:695,72,0	1/1:3,30:33:81.13:782,81,0	1/1:4,29:33:86.44:806,86,0	1/1:2,28:30:78.12:753,78,0	1/1:2,8:10:24.03:231,24,0
chr10	45655859	.	TTGTG	T	3649.78	PASS	AB=0.857;AC=30;AF=0.556;AN=54;BaseQRankSum=2.554;DP=582;FS=0.000;HRun=0;HaplotypeScore=101.9467;InbreedingCoeff=0.7517;MQ=61.22;MQ0=15;MQRankSum=-1.397;QD=10.67;ReadPosRankSum=0.605;VQSLOD=2.8831;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:25,21:47:30.07:448,30,0	1/1:3,0:7:9.01:103,9,0	./.	0/0:15,0:10:0.47:0,0,1	0/0:11,0:19:27.24:0,27,502	0/0:17,0:17:32.73:0,33,593	0/0:26,0:25:35.51:0,36,574	0/1:28,0:26:21.90:22,0,31	1/1:7,8:15:23.77:348,24,0	0/0:17,0:24:25.33:0,25,411	0/0:11,0:15:14.73:0,15,280	1/1:7,7:13:15.01:208,15,0	1/1:12,10:23:21.06:310,21,0	1/1:9,10:19:8.94:141,9,0	0/0:17,0:17:15.98:0,16,194	0/0:10,0:16:2.88:0,3,52	0/0:17,0:30:39.04:0,39,691	0/0:23,0:21:19.18:0,19,246	1/1:13,6:19:18.01:233,18,0	1/1:7,3:11:11.95:115,12,0	0/1:21,14:32:5.89:217,0,6	1/1:14,13:27:35.72:360,36,0	1/1:6,13:20:21.01:282,21,0	1/1:12,8:22:17.84:262,18,0	0/0:10,0:12:17.89:0,18,388	1/1:12,0:18:21.02:196,21,0	1/1:9,15:27:7.41:312,7,0	1/1:4,4:8:6.02:94,6,0
chr10	45660534	.	A	AC	11960.82	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-16.894;DP=747;FS=6.116;HRun=3;HaplotypeScore=72.8321;InbreedingCoeff=0.9999;MQ=82.83;MQ0=0;MQRankSum=-1.968;QD=40.41;ReadPosRankSum=0.930;VQSLOD=4.4620;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,147,1894	1/1:0,15:14:39.13:584,39,0	0/0:26,0:26:72.17:0,72,887	0/0:24,0:24:57.16:0,57,720	1/1:1,17:18:45.15:673,45,0	1/1:2,16:18:42.14:629,42,0	1/1:0,32:32:90.30:1349,90,0	1/1:1,48:49:99:2150,147,0	0/0:28,0:28:84.26:0,84,1076	1/1:2,29:31:90.27:1307,90,0	1/1:0,17:17:45.11:649,45,0	0/0:24,0:24:69.22:0,69,896	0/0:19,0:19:57.19:0,57,740	0/0:34,0:34:99:0,99,1267	1/1:0,27:27:78.26:1169,78,0	1/1:2,20:22:54.15:809,54,0	0/0:51,0:51:99:0,150,1916	1/1:0,23:23:63.21:944,63,0	0/0:21,0:21:60.19:0,60,767	0/0:25,0:25:75.23:0,75,956	0/0:41,0:41:99:0,123,1568	0/0:25,0:25:66.21:0,66,852	0/0:24,0:24:69.21:0,69,877	0/0:27,0:27:81.22:0,81,1032	1/1:3,18:21:51.17:755,51,0	1/1:0,23:23:63.21:941,63,0	0/0:21,0:21:63.20:0,63,817	0/0:10,0:10:30.10:0,30,389
chr10	45660886	.	ACACACTCCTGAGATCCCAGC	A	13048.78	PASS	AB=0.988;AC=27;AF=0.482;AN=56;BaseQRankSum=-7.022;DP=1471;FS=14.463;HRun=0;HaplotypeScore=617.2907;InbreedingCoeff=-0.8088;MQ=34.10;MQ0=145;MQRankSum=-1.849;QD=10.25;ReadPosRankSum=-0.415;VQSLOD=0.1272;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:78,0:60:99:787,0,194	0/1:39,0:35:99:203,0,711	0/0:100,0:8:5.88:0,6,43	0/0:95,0:8:15.05:0,15,278	0/1:49,0:45:99:354,0,296	0/1:35,0:30:99:391,0,456	0/1:86,0:78:99:768,0,1106	0/1:71,0:43:99:166,0,391	0/1:41,0:36:99:293,0,379	0/1:65,0:57:99:397,0,851	0/1:38,0:31:99:119,0,166	0/1:44,0:41:99:1231,0,137	0/1:31,0:27:99:343,0,270	0/1:39,0:35:74.11:1077,0,74	0/1:55,0:50:99:360,0,1166	0/1:47,0:40:99:808,0,829	0/1:65,0:63:99:769,0,575	0/1:31,0:30:99:411,0,448	1/1:49,0:21:11.52:194,12,0	0/1:39,0:35:99:512,0,510	0/1:100,0:78:99:628,0,106	0/1:32,0:26:99:308,0,122	0/1:24,20:36:85.18:170,0,85	0/1:31,0:30:31.84:664,0,32	0/1:49,0:44:99:428,0,110	0/1:69,0:55:99:483,0,861	0/1:33,0:29:99:932,0,277	0/1:12,0:12:99:255,0,114
chr10	45660900	.	TC	T	6805.33	PASS	AB=0.804;AC=28;AF=0.500;AN=56;BaseQRankSum=1.074;DP=1509;FS=123.745;HRun=3;HaplotypeScore=423.2130;InbreedingCoeff=-0.9959;MQ=37.70;MQ0=121;MQRankSum=-8.580;QD=4.51;ReadPosRankSum=4.465;VQSLOD=1.0675;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:60,18:61:99:242,0,500	0/1:25,13:36:99:329,0,491	0/1:73,12:9:52.69:53,0,132	0/1:66,16:12:99:122,0,135	0/1:38,12:46:99:160,0,499	0/1:26,13:34:99:181,0,402	0/1:66,28:87:99:609,0,1494	0/1:56,11:43:99:104,0,1065	0/1:28,19:43:99:357,0,488	0/1:47,13:53:99:331,0,916	0/1:33,7:33:99:111,0,291	0/1:37,16:50:99:455,0,820	0/1:27,11:35:99:126,0,522	0/1:28,13:38:99:244,0,621	0/1:42,18:57:99:303,0,931	0/1:33,18:46:99:486,0,595	0/1:44,24:66:99:495,0,947	0/1:19,15:34:99:380,0,306	0/1:36,1:15:12.18:12,0,402	0/1:37,8:40:99:196,0,745	0/1:67,26:80:99:156,0,511	0/1:37,4:38:94.57:95,0,443	0/1:41,4:40:69.12:69,0,174	0/1:34,10:41:68.47:68,0,378	0/1:41,8:45:99:183,0,541	0/1:46,24:57:99:495,0,882	0/1:25,15:37:99:368,0,581	0/1:14,3:16:75.05:75,0,330
chr10	45660905	.	G	GA	8626.92	PASS	AB=0.771;AC=26;AF=0.464;AN=56;BaseQRankSum=-5.465;DP=1473;FS=0.585;HRun=1;HaplotypeScore=427.6360;InbreedingCoeff=-0.8672;MQ=37.60;MQ0=131;MQRankSum=1.898;QD=6.58;ReadPosRankSum=4.164;VQSLOD=1.5598;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:47,32:62:99:361,0,573	0/1:24,9:31:99:136,0,642	0/0:76,9:9:20.95:0,21,235	0/0:65,11:12:29.07:0,29,318	0/1:35,13:44:99:291,0,473	0/1:31,11:36:99:253,0,511	0/1:59,29:81:99:878,0,1284	0/1:49,16:39:99:268,0,769	0/1:31,14:41:99:218,0,709	0/1:53,12:56:99:198,0,1072	0/1:25,7:27:74.95:75,0,317	0/1:36,18:52:99:604,0,703	0/1:24,14:36:99:269,0,522	0/1:23,19:40:99:599,0,374	0/1:52,10:60:72.12:72,0,1300	0/1:41,8:47:99:242,0,1050	0/1:55,19:73:99:630,0,1202	0/1:29,7:36:99:106,0,663	0/1:24,11:13:99:191,0,218	0/1:24,23:43:99:537,0,525	0/1:59,30:73:99:415,0,359	0/1:17,17:32:99:362,0,310	0/1:34,8:38:99:178,0,246	0/1:30,16:43:99:363,0,145	0/1:26,12:35:99:345,0,556	0/1:53,15:54:99:403,0,1012	0/1:21,17:36:99:485,0,432	0/1:9,5:13:99:147,0,243
chr10	45660941	.	TC	T	2691.46	PASS	AB=0.850;AC=20;AF=0.357;AN=56;BaseQRankSum=-1.033;DP=1839;FS=73.094;HRun=3;HaplotypeScore=546.4837;InbreedingCoeff=-0.5736;MQ=39.73;MQ0=113;MQRankSum=-3.106;QD=2.13;ReadPosRankSum=-1.036;VQSLOD=0.0331;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:80,13:75:33.71:0,34,1607	0/1:31,3:31:5.04:5,0,816	0/0:59,29:14:4.58:0,5,352	0/0:67,25:20:41.79:0,42,518	0/1:47,13:57:11.57:12,0,712	0/1:46,9:48:31.21:31,0,1348	0/1:76,9:72:99:118,0,1698	0/0:101,3:74:99:0,143,2207	0/1:50,8:54:47.79:48,0,1313	0/1:63,46:97:99:934,0,1076	0/0:45,3:46:20.74:0,21,698	0/1:57,27:78:52.02:52,0,1382	0/1:44,4:43:40.68:41,0,1171	0/1:47,6:47:39.46:39,0,1198	0/1:46,21:65:99:287,0,1279	0/1:44,8:49:99:171,0,1244	0/1:78,6:83:24.68:25,0,2135	0/1:47,5:49:61.93:62,0,1235	0/0:56,1:30:18.97:0,19,831	0/1:43,15:55:99:169,0,1059	0/1:78,26:89:64.37:64,0,1408	0/1:36,5:40:44.62:45,0,759	0/1:35,9:38:99:172,0,347	0/0:60,6:64:1.08:0,1,1282	0/1:38,8:40:67.45:67,0,775	0/1:61,16:64:99:390,0,1185	0/1:43,8:50:99:116,0,1102	0/0:26,1:25:24.05:0,24,681
chr10	45661350	.	C	CA	11170.60	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-16.275;DP=701;FS=0.287;HRun=3;HaplotypeScore=64.5223;InbreedingCoeff=0.9989;MQ=71.00;MQ0=0;MQRankSum=-1.911;QD=37.49;ReadPosRankSum=1.492;VQSLOD=5.3115;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,40:43:99:1564,114,0	0/0:14,0:14:42.10:0,42,489	0/0:16,0:16:42.07:0,42,458	0/0:10,0:10:18.05:0,18,216	0/0:50,0:50:99:0,141,1656	0/0:24,0:24:72.22:0,72,863	0/0:15,0:15:45.14:0,45,540	0/0:35,0:35:93.21:0,93,1064	1/1:2,21:23:51.17:714,51,0	0/0:38,0:38:99:0,108,1296	0/0:25,0:25:72.20:0,72,841	1/1:0,18:18:48.16:672,48,0	1/1:1,19:20:54.18:756,54,0	1/1:0,22:22:57.19:798,57,0	0/0:21,0:21:63.19:0,63,756	0/0:26,0:26:72.21:0,72,853	0/0:29,0:29:78.24:0,78,934	0/0:25,0:25:66.20:0,66,792	1/1:0,14:14:42.12:570,42,0	1/1:0,36:36:99:1512,108,0	1/1:0,18:18:51.17:714,51,0	1/1:1,20:21:54.18:756,54,0	1/1:2,21:23:60.16:818,60,0	1/1:0,15:15:42.14:588,42,0	0/0:37,0:37:99:0,108,1296	0/0:37,0:37:99:0,105,1259	1/1:3,24:27:75.24:1035,75,0	1/1:0,18:18:48.16:672,48,0
chr10	45661575	.	GCAGA	G	21006.11	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=7.180;DP=685;FS=0.000;HRun=0;HaplotypeScore=151.8400;InbreedingCoeff=0.9978;MQ=72.29;MQ0=0;MQRankSum=-7.899;QD=35.54;ReadPosRankSum=5.720;VQSLOD=4.9137;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:15,27:43:84.27:1388,84,0	1/1:2,7:8:21.07:343,21,0	0/0:31,0:30:64.94:0,65,1436	0/0:35,0:35:70.79:0,71,1578	1/1:1,22:24:54.13:845,54,0	1/1:5,17:22:48.12:777,48,0	1/1:9,13:22:39.09:627,39,0	1/1:7,22:29:66.16:986,66,0	1/1:6,26:32:66.23:1114,66,0	1/1:3,29:33:90.30:1488,90,0	1/1:7,17:24:45.15:759,45,0	1/1:2,16:18:45.15:760,45,0	1/1:6,9:15:33.11:557,33,0	1/1:4,15:19:42.14:708,42,0	1/1:2,20:22:51.17:861,51,0	1/1:3,28:31:75.26:1266,75,0	0/0:28,0:28:75.21:0,75,1753	1/1:8,19:27:39.95:752,40,0	1/1:7,8:16:30.06:475,30,0	1/1:5,25:30:66.22:1093,66,0	1/1:8,15:23:42.14:696,42,0	1/1:3,15:18:39.13:658,39,0	1/1:4,17:21:36.08:576,36,0	1/1:9,20:29:51.17:860,51,0	1/1:3,19:22:57.20:962,57,0	1/1:2,27:29:81.23:1302,81,0	1/1:5,18:23:45.11:728,45,0	1/1:1,9:10:27.05:423,27,0
chr10	45662716	.	TG	T	5957.97	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=5.955;DP=607;FS=3.259;HRun=8;HaplotypeScore=73.3744;InbreedingCoeff=0.9918;MQ=71.55;MQ0=1;MQRankSum=-0.117;QD=23.93;ReadPosRankSum=2.490;VQSLOD=5.7484;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,99,1154	0/0:12,0:12:27.08:0,27,321	0/0:21,0:19:50.94:0,51,552	0/0:15,0:15:37.94:0,38,384	1/1:8,11:19:36.03:339,36,0	1/1:0,25:25:69.11:666,69,0	1/1:4,21:25:57.08:550,57,0	1/1:3,10:13:24.03:232,24,0	0/0:12,0:12:36.11:0,36,435	1/1:3,21:24:66.10:636,66,0	1/1:2,13:16:41.09:383,41,0	0/0:18,0:18:51.15:0,51,605	0/0:20,0:20:48.13:0,48,566	0/0:30,0:30:84.26:0,84,1014	1/1:3,23:26:54.08:521,54,0	1/1:3,17:20:51.08:493,51,0	0/0:32,0:32:87.23:0,87,1017	1/1:4,28:32:84.13:811,84,0	0/0:20,0:20:51.15:0,51,605	0/0:14,0:14:30.08:0,30,351	0/0:31,0:31:69.20:0,69,821	0/0:13,0:13:36.08:0,36,403	0/0:8,0:8:9.49:0,9,98	0/0:25,0:25:72.21:0,72,857	1/1:2,22:24:69.10:661,69,0	1/1:2,23:25:69.10:666,69,0	0/0:28,0:27:75.22:0,75,894	0/0:21,0:20:63.18:0,63,748
chr10	45663024	.	CT	C	3699.68	PASS	AB=0.755;AC=35;AF=0.625;AN=56;BaseQRankSum=7.608;DP=624;FS=8.870;HRun=14;HaplotypeScore=77.6685;InbreedingCoeff=0.4357;MQ=69.25;MQ0=2;MQRankSum=0.051;QD=7.92;ReadPosRankSum=5.469;VQSLOD=2.3439;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,18:25:16.25:259,16,0	1/1:2,0:12:20.36:59,20,0	0/1:11,1:8:11.83:12,0,31	0/1:15,2:14:17.73:18,0,97	0/0:24,0:25:41.84:0,42,361	1/1:3,0:16:22.37:65,22,0	1/1:4,1:26:37.58:121,38,0	1/1:9,15:24:7.34:197,7,0	1/1:15,14:29:24.89:250,25,0	0/0:17,0:17:7:0,7,173	0/0:13,1:14:8.98:0,9,199	1/1:9,12:23:39.51:258,40,0	0/1:6,11:17:15.15:170,0,15	1/1:13,9:23:32.77:217,33,0	0/0:26,0:26:58.38:0,58,516	0/0:20,0:21:41.85:0,42,364	0/0:33,0:34:45.32:0,45,524	0/1:29,5:36:25.93:26,0,459	0/1:7,4:13:5.98:92,0,6	1/1:6,14:20:38.61:267,39,0	1/1:9,18:27:38.60:267,39,0	1/1:8,12:20:26.64:185,27,0	0/1:8,14:23:14.37:186,0,14	1/1:11,11:23:34.69:232,35,0	0/0:19,1:20:4.65:0,5,278	0/1:14,13:27:11.48:203,0,11	1/1:7,16:23:37.68:252,38,0	1/1:12,17:30:47.67:365,48,0
chr10	45664132	.	G	GAAAC	8603.24	PASS	AB=0.909;AC=29;AF=0.518;AN=56;BaseQRankSum=9.107;DP=709;FS=0.380;HRun=0;HaplotypeScore=182.8628;InbreedingCoeff=0.8997;MQ=54.94;MQ0=2;MQRankSum=-11.320;QD=22.06;ReadPosRankSum=-6.162;VQSLOD=2.9015;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:42,0:42:35.02:573,35,0	0/0:14,0:14:24.08:0,24,380	0/0:15,0:12:18.06:0,18,272	0/0:20,0:15:12:0,12,176	0/0:31,0:32:69.23:0,69,1080	0/0:15,0:15:16.88:0,17,329	0/0:21,0:21:33.10:0,33,502	0/1:36,4:39:17.80:593,0,18	1/1:29,0:28:42.14:708,42,0	0/0:32,0:32:51.15:0,51,752	0/0:26,0:26:48.16:0,48,766	1/1:23,0:23:39.13:654,39,0	1/1:27,0:27:45.15:769,45,0	1/1:23,0:23:30.10:509,30,0	0/0:32,0:32:78.27:0,78,1241	0/0:31,0:31:60.17:0,60,911	0/0:30,0:31:75.21:0,75,1132	0/0:27,0:28:42.14:0,42,670	1/1:21,0:19:15.01:203,15,0	1/1:27,0:27:42.14:707,42,0	1/1:22,0:22:9.01:151,9,0	1/1:16,0:16:12.04:203,12,0	1/1:20,0:20:24.08:394,24,0	1/1:29,0:29:26.96:354,27,0	0/0:22,0:22:57.19:0,57,907	1/1:11,31:44:54.40:2115,54,0	1/1:21,0:20:30.10:517,30,0	1/1:6,0:6:9.03:152,9,0
chr10	45664163	.	A	ACAAACAAACAAG	21738.17	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-4.227;DP=728;FS=2.405;HRun=0;HaplotypeScore=210.9295;InbreedingCoeff=0.9910;MQ=69.09;MQ0=3;MQRankSum=-11.328;QD=67.72;ReadPosRankSum=2.208;VQSLOD=4.7271;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,22:32:32.97:1845,33,0	0/0:11,0:11:33.08:0,33,974	0/0:39,0:31:83.33:0,83,1270	0/0:29,0:22:62.37:0,62,877	0/0:30,0:30:87.23:0,87,2721	0/0:16,0:16:48.03:0,48,988	0/0:20,0:20:60.10:0,60,1409	0/0:29,0:29:86.27:0,86,748	1/1:0,27:31:42.47:2636,42,0	0/0:29,0:29:84.20:0,84,2009	0/0:25,0:25:75.15:0,75,2105	1/1:0,22:27:38.84:2448,39,0	1/1:1,24:32:44.87:2704,45,0	1/1:3,20:30:29.53:1782,30,0	0/0:38,0:38:99:0,111,3239	0/0:33,0:33:99:0,99,2494	0/0:30,0:30:90.21:0,90,2952	0/0:17,0:17:51.09:0,51,1647	1/1:0,14:25:68.64:1025,69,0	1/1:1,22:29:62.71:2651,63,0	1/1:10,0:10:20.79:353,21,0	1/1:1,17:21:35.90:881,36,0	1/1:1,19:24:33.80:1558,34,0	1/1:1,23:27:27:1409,27,0	0/0:27,0:27:81.20:0,81,2395	0/0:34,0:34:49.92:0,50,674	1/1:0,19:23:30.10:1879,30,0	1/1:0,7:9:9.03:567,9,0
chr10	45665537	.	C	CTGTT	17986.88	PASS	AB=0.591;AC=29;AF=0.518;AN=56;BaseQRankSum=-12.054;DP=823;FS=1.482;HRun=0;HaplotypeScore=128.8645;InbreedingCoeff=0.9230;MQ=60.37;MQ0=2;MQRankSum=1.047;QD=37.39;ReadPosRankSum=0.387;VQSLOD=4.9297;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,36:49:99:2355,99,0	0/0:2,0:10:21.02:0,21,196	0/0:31,0:25:14.74:0,15,249	0/0:30,0:23:23.50:0,23,315	0/0:25,0:25:51.15:0,51,782	0/0:26,0:26:63.21:0,63,1014	0/0:40,0:40:81.25:0,81,1251	1/1:50,0:46:43.31:459,43,0	1/1:10,21:33:60.21:1437,60,0	0/0:28,0:28:60.20:0,60,975	0/0:18,0:18:48.16:0,48,772	0/1:8,17:26:52.45:893,0,52	1/1:10,14:24:36.59:875,37,0	1/1:6,22:28:72.25:1697,72,0	0/0:32,0:32:69.22:0,69,1098	0/0:28,0:28:54.18:0,54,870	0/0:30,0:30:62.81:0,63,1024	0/0:21,0:21:39.13:0,39,634	1/1:19,15:33:51.16:1154,51,0	1/1:19,18:38:15.59:1269,16,0	1/1:14,23:36:54.19:1311,54,0	1/1:13,16:29:53.92:1238,54,0	1/1:10,10:21:36.08:807,36,0	1/1:7,28:35:75.26:1816,75,0	0/0:23,0:23:36.05:0,36,555	1/1:15,1:33:50.14:782,50,0	1/1:7,20:27:54.19:1310,54,0	1/1:3,8:10:24.08:583,24,0
chr10	45666050	.	AG	A	11852.87	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=16.123;DP=689;FS=0.603;HRun=2;HaplotypeScore=66.9490;InbreedingCoeff=0.9956;MQ=79.67;MQ0=0;MQRankSum=-6.673;QD=35.28;ReadPosRankSum=3.699;VQSLOD=5.3322;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,42:42:99:1558,120,0	0/0:9,0:9:27.09:0,27,404	0/0:15,0:15:44.97:0,45,620	0/0:17,0:17:39.13:0,39,580	0/0:17,0:17:51.16:0,51,742	0/0:19,0:19:51.17:0,51,764	0/0:47,0:47:99:0,141,2074	0/0:30,0:30:84.22:0,84,1193	1/1:0,24:24:63.20:818,63,0	0/0:21,0:21:63.21:0,63,928	0/0:16,0:16:48.14:0,48,697	1/1:1,31:32:87.28:1130,87,0	1/1:0,27:27:72.22:920,72,0	1/1:1,25:26:78.25:1007,78,0	0/0:27,0:27:81.27:0,81,1193	0/0:20,0:20:57.18:0,57,834	0/0:35,1:36:69.47:0,69,1514	0/0:30,0:30:90.30:0,90,1349	1/1:1,25:26:72.18:889,72,0	1/1:0,22:22:60.20:779,60,0	1/1:2,48:50:99:1752,135,0	1/1:0,16:16:45.15:584,45,0	1/1:0,15:15:45.15:584,45,0	1/1:0,33:33:84.27:1091,84,0	0/0:25,0:25:72.24:0,72,1079	0/0:24,0:24:72.23:0,72,1038	1/1:1,16:16:45.15:584,45,0	1/1:1,5:6:12.04:156,12,0
chr10	45666649	.	TTGCAGTGAGCAACCCTGGTGCGTGATTG	T	1034.93	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.802;DP=822;FS=4.002;HRun=0;HaplotypeScore=559.4327;InbreedingCoeff=0.9839;MQ=77.60;MQ0=0;MQRankSum=-3.792;QD=147.85;ReadPosRankSum=1.696;VQSLOD=3.1932;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,126,14090	1/1:1,6:7:15.05:1123,15,0	0/0:23,0:23:66.22:0,66,3804	0/0:14,0:14:36.04:0,36,1920	0/0:28,0:28:69.24:0,69,8012	0/0:17,0:17:51.18:0,51,6095	0/0:38,0:38:99:0,108,10393	0/0:29,0:29:87.30:0,87,7165	0/0:31,0:31:90.77:0,91,10257	0/0:43,0:43:99:0,126,14324	0/0:22,0:22:63.22:0,63,7119	0/0:51,0:51:99:0,141,15435	0/0:24,0:24:72.25:0,72,8427	0/0:38,0:38:99:0,105,11577	0/0:25,0:25:75.26:0,75,9005	0/0:30,0:30:90.30:0,90,10510	0/0:34,0:34:99:0,99,10981	0/0:33,0:33:96.33:0,96,9366	0/0:26,0:26:75.26:0,75,6589	0/0:28,0:28:84.29:0,84,9728	0/0:76,0:76:99:0,211,24003	0/0:25,0:25:72.25:0,72,7717	0/0:21,0:21:60.21:0,60,7147	0/0:26,0:26:75.24:0,75,7042	0/0:15,0:15:39.13:0,39,4127	0/0:34,0:34:99:0,99,11014	0/0:22,0:22:66.23:0,66,6888	0/0:19,0:19:57.20:0,57,5336
chr10	45667453	.	TA	T	4162.13	PASS	AB=0.883;AC=19;AF=0.339;AN=56;BaseQRankSum=9.680;DP=735;FS=4.837;HRun=11;HaplotypeScore=80.9877;InbreedingCoeff=0.7947;MQ=62.24;MQ0=1;MQRankSum=1.046;QD=14.01;ReadPosRankSum=3.174;VQSLOD=4.2224;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,25:29:70.93:572,71,0	0/0:12,1:13:11.43:0,11,314	0/1:20,2:18:1.38:1,0,215	0/1:12,2:14:4.99:5,0,121	0/0:32,1:34:53.39:0,53,757	0/0:20,2:22:7.86:0,8,495	0/0:19,0:19:48.09:0,48,496	0/0:12,0:40:84.33:0,84,481	1/1:4,27:31:45.91:584,46,0	0/0:31,3:34:40.13:0,40,777	0/0:22,0:22:57.13:0,57,595	1/1:7,17:24:26.74:370,27,0	1/1:6,15:21:35.82:295,36,0	1/1:4,28:32:65.91:542,66,0	0/0:25,1:26:47.52:0,48,698	0/0:25,1:27:44.34:0,44,641	0/0:29,0:29:75.16:0,75,789	0/1:25,5:30:26.34:26,0,556	0/0:21,0:20:42.09:0,42,440	0/0:30,0:30:54.16:0,54,686	0/0:25,0:25:63.14:0,63,664	1/1:4,29:33:83.85:684,84,0	1/1:8,16:24:44.77:369,45,0	1/1:5,32:37:86.89:714,87,0	0/0:28,0:28:75.17:0,75,792	0/0:6,0:27:65.99:0,66,370	0/0:26,0:27:75.02:0,75,781	0/0:14,0:14:40.34:0,40,419
chr10	45667801	.	C	CG	6784.40	PASS	AB=0.520;AC=13;AF=0.232;AN=56;BaseQRankSum=-11.145;DP=762;FS=17.396;HRun=0;HaplotypeScore=87.0039;InbreedingCoeff=0.9412;MQ=87.68;MQ0=0;MQRankSum=-6.511;QD=38.33;ReadPosRankSum=0.847;VQSLOD=3.1966;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,108,1501	0/0:9,0:9:24.08:0,24,335	0/0:25,0:25:75.22:0,75,985	0/0:34,0:34:91.51:0,92,1213	1/1:1,19:20:30.10:473,30,0	0/0:18,0:18:54.18:0,54,755	0/0:22,0:22:66.21:0,66,905	0/0:42,0:42:99:0,111,1526	0/0:31,0:31:81.26:0,81,1115	1/1:1,28:29:78.23:1185,78,0	1/1:2,20:22:54.18:854,54,0	0/0:37,0:37:99:0,105,1452	0/0:27,0:27:78.24:0,78,1070	0/0:34,0:34:96.32:0,96,1341	1/1:1,29:30:87.30:1376,87,0	1/1:0,26:26:69.24:1102,69,0	0/0:43,0:43:99:0,129,1804	0/1:2,24:26:1.52:1027,0,2	0/0:22,0:22:60.18:0,60,807	0/0:23,0:23:57.17:0,57,764	0/0:32,0:32:90.27:0,90,1222	0/0:23,0:23:51.13:0,51,684	0/0:12,0:12:30.07:0,30,385	0/0:30,0:30:84.28:0,84,1174	1/1:1,23:24:48.16:766,48,0	0/0:28,1:29:21.13:0,21,818	0/0:31,0:31:93.31:0,93,1300	0/0:11,0:11:33.11:0,33,460
chr10	45668054	.	G	GC	80.75	PASS	AB=0.900;AC=14;AF=0.318;AN=44;BaseQRankSum=4.467;DP=297;FS=10.611;HRun=0;HaplotypeScore=48.6505;InbreedingCoeff=0.6313;MQ=62.56;MQ0=17;MQRankSum=0.286;QD=3.67;ReadPosRankSum=-4.343;VQSLOD=0.6575;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,2:2:3:28,3,0	1/1:2,0:2:5.98:46,6,0	0/0:9,0:6:18.06:0,18,240	0/0:12,0:8:17.55:0,18,219	0/0:19,0:19:46.40:0,46,632	0/0:14,0:12:36.12:0,36,503	0/0:25,0:24:63.16:0,63,842	0/0:15,0:14:36.06:0,36,437	./.	0/0:22,0:20:60.20:0,60,830	0/0:19,0:19:39.13:0,39,542	./.	./.	./.	0/0:21,0:20:57.15:0,57,775	0/0:15,0:15:41.80:0,42,565	0/0:43,0:42:99:0,123,1702	0/0:13,0:13:39.13:0,39,545	1/1:2,0:1:2.97:20,3,0	1/1:0,2:2:3.01:40,3,0	1/1:3,0:3:2.99:23,3,0	1/1:3,0:2:2.99:23,3,0	0/1:3,0:3:0:0,0,0	0/1:3,1:4:32.85:36,0,33	0/0:16,0:16:48.06:0,48,609	0/0:28,0:27:81.11:0,81,1047	./.	./.
chr10	45669268	.	CAGAGAGAGAGAGAGAGAG	C	815.40	PASS	AB=0.727;AC=11;AF=0.220;AN=50;BaseQRankSum=3.198;DP=545;FS=8.823;HRun=0;HaplotypeScore=220.9835;InbreedingCoeff=0.6076;MQ=70.23;MQ0=10;MQRankSum=-1.750;QD=8.32;ReadPosRankSum=-0.085;VQSLOD=1.2237;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:31.66:0,32,1454	0/0:7,0:7:9.03:0,9,335	./.	./.	1/1:16,7:23:2.97:20,3,0	0/0:19,0:19:24.06:0,24,399	0/0:22,0:26:11.36:0,11,239	0/0:30,0:30:18.53:0,19,550	0/0:15,0:17:15.05:0,15,759	0/0:18,0:17:3.63:0,4,10	1/1:10,0:10:3.01:63,3,0	0/0:7,0:8:12.04:0,12,576	0/0:18,0:18:15.05:0,15,715	0/0:15,0:15:15.05:0,15,696	1/1:5,6:11:3.01:145,3,0	1/1:16,1:20:15.05:510,15,0	0/0:34,0:34:39.94:0,40,1171	1/1:15,3:18:3.01:145,3,0	0/0:21,0:21:21.84:0,22,1053	./.	0/0:23,0:22:15.03:0,15,823	0/0:25,0:25:24.08:0,24,1209	0/0:18,0:17:15.05:0,15,538	0/0:25,0:25:30.10:0,30,1864	0/1:10,0:16:73.14:73,0,112	0/0:21,0:21:32.29:0,32,1112	0/0:18,0:16:26.12:0,26,1363	0/0:4,0:4:5.23:0,5,196
chr10	45671854	.	T	TAC	16747.52	PASS	AB=0.848;AC=26;AF=0.464;AN=56;BaseQRankSum=4.165;DP=1020;FS=1.162;HRun=0;HaplotypeScore=167.2622;InbreedingCoeff=0.8583;MQ=63.58;MQ0=3;MQRankSum=-2.887;QD=31.72;ReadPosRankSum=0.492;VQSLOD=5.8536;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:28,45:73:99:2836,186,0	0/0:18,0:18:51.14:0,51,614	0/0:31,0:24:36.60:0,37,403	0/1:37,0:26:27.07:27,0,345	0/0:34,0:35:93.28:0,93,1131	0/0:30,0:30:78.24:0,78,957	0/0:39,0:39:84.14:0,84,994	0/0:23,0:23:48.12:0,48,558	1/1:15,29:43:53.68:1489,54,0	0/0:46,0:47:99:0,117,1407	0/0:27,0:26:60.17:0,60,725	1/1:7,24:31:38.31:1134,38,0	1/1:10,33:43:47.43:1281,47,0	1/1:7,27:34:69.24:1115,69,0	0/0:44,0:44:99:0,111,1367	0/0:45,0:45:99:0,114,1388	0/0:51,0:54:99:0,128,1654	0/0:38,0:38:50.62:0,51,1004	1/1:10,10:17:33.11:537,33,0	1/1:6,26:33:72.25:1174,72,0	1/1:25,47:72:99:2411,111,0	1/1:5,35:40:81.27:1301,81,0	1/1:5,17:22:45.15:730,45,0	1/1:12,26:38:96.27:1521,96,0	0/0:25,0:25:66.16:0,66,794	0/0:35,0:35:90.28:0,90,1108	1/1:9,16:25:57.19:918,57,0	0/1:9,7:16:15.90:273,0,16
chr10	45672014	.	C	CAT	7503.55	PASS	AB=0.694;AC=23;AF=0.411;AN=56;BaseQRankSum=16.524;DP=1096;FS=2.706;HRun=0;HaplotypeScore=366.6059;InbreedingCoeff=0.7796;MQ=52.69;MQ0=10;MQRankSum=-12.213;QD=17.25;ReadPosRankSum=-2.300;VQSLOD=3.8761;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:24,14:38:87.99:206,0,88	0/0:13,0:13:36.12:0,36,528	0/0:57,0:25:63.23:0,63,781	0/0:60,0:41:94.58:0,95,1220	0/0:25,0:25:72.23:0,72,1041	0/0:35,0:35:82.63:0,83,1192	0/0:44,0:44:99:0,126,1780	0/0:50,0:49:99:0,135,1919	1/1:9,36:45:57.57:1148,58,0	0/0:66,0:66:99:0,184,2658	0/0:24,0:24:66.21:0,66,951	1/1:12,29:40:53.77:878,54,0	1/1:9,32:42:74.56:1232,75,0	1/1:7,36:42:59.84:987,60,0	0/0:61,0:61:99:0,184,2575	0/0:68,1:69:99:0,143,2711	0/0:33,0:33:87.29:0,87,1279	0/0:32,0:32:77.24:0,77,1159	1/1:9,11:19:54.04:795,54,0	1/1:9,13:22:27.86:364,28,0	0/1:52,18:65:71.86:296,0,72	1/1:8,32:40:21.32:638,21,0	1/1:5,11:16:20.62:343,21,0	1/1:14,19:33:3.05:25,3,0	0/0:29,0:29:72.23:0,72,1035	0/0:60,0:59:99:0,178,2533	1/1:7,13:20:29.98:433,30,0	0/1:1,4:5:2.46:159,0,2
chr10	45672015	.	ATG	A	304.32	PASS	AB=0.968;AC=16;AF=0.286;AN=56;BaseQRankSum=11.347;DP=1087;FS=26.936;HRun=0;HaplotypeScore=385.6647;InbreedingCoeff=0.2716;MQ=52.81;MQ0=10;MQRankSum=-7.538;QD=0.75;ReadPosRankSum=-3.217;VQSLOD=0.7249;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:27,9:36:13.46:125,13,0	0/0:14,0:14:39.13:0,39,765	0/0:59,0:25:57.62:0,58,1067	0/0:60,0:41:92.01:0,92,1686	0/0:26,0:26:78.27:0,78,1544	0/0:33,0:33:90.05:0,90,1759	0/0:44,0:44:99:0,129,2515	0/0:51,0:50:99:0,151,2953	0/1:44,1:45:15.24:15,0,21	0/0:65,0:65:99:0,193,3813	0/0:24,0:24:72.23:0,72,1384	0/1:41,0:40:37.87:38,0,45	0/1:42,0:42:34.92:63,0,35	0/1:42,0:41:28.61:29,0,29	0/0:64,0:64:99:0,193,3781	0/0:70,0:70:99:0,210,4119	0/0:32,0:32:87.30:0,87,1734	0/0:31,0:31:81.85:0,82,1597	0/0:20,0:19:30.41:0,30,168	0/1:21,1:22:1.29:19,0,1	1/1:53,12:62:6.59:98,7,0	0/1:39,1:40:14.15:25,0,14	1/1:14,2:16:1.65:7,2,0	1/1:27,4:31:1.33:6,1,0	0/0:27,0:27:75.26:0,75,1493	0/0:60,0:60:99:0,178,3531	0/1:20,0:20:0.39:0,0,11	0/1:4,1:5:11.66:37,0,12
chr10	45672028	.	TAC	T	1054.57	PASS	AB=0.969;AC=22;AF=0.393;AN=56;BaseQRankSum=13.159;DP=1006;FS=56.022;HRun=0;HaplotypeScore=361.1646;InbreedingCoeff=0.6197;MQ=52.77;MQ0=9;MQRankSum=-12.334;QD=2.91;ReadPosRankSum=-2.892;VQSLOD=0.2068;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:26,3:29:11.29:68,11,0	0/0:16,0:16:45.15:0,45,814	0/0:56,0:30:54.67:0,55,951	0/0:54,0:38:83.15:0,83,1425	0/0:27,0:27:78.23:0,78,1355	0/0:32,0:32:87.02:0,87,1518	0/0:40,0:40:99:0,117,2056	0/0:48,0:47:99:0,135,2422	1/1:40,0:40:14.51:232,15,0	0/0:57,0:57:99:0,166,2941	0/0:22,0:22:57.19:0,57,1009	1/1:38,0:38:33.87:252,34,0	1/1:36,0:36:15.81:199,16,0	0/1:42,0:42:22.69:131,0,23	0/0:69,0:69:99:0,202,3532	0/0:72,0:72:99:0,211,3760	0/0:30,0:30:87.28:0,87,1556	0/0:30,1:31:78.27:0,78,1418	0/1:13,0:13:34:128,0,34	0/1:16,0:16:13.37:13,0,25	1/1:40,9:48:1.29:7,1,0	1/1:34,1:35:5.61:41,6,0	1/1:12,1:13:5.91:40,6,0	0/1:24,4:28:0.54:1,0,1	0/0:30,0:30:84.27:0,84,1503	0/0:57,0:56:99:0,163,2922	1/1:19,0:19:4.37:125,4,0	1/1:4,1:5:0.73:2,1,0
chr10	45672032	.	CAT	C	2842.17	PASS	AB=0.571;AC=25;AF=0.446;AN=56;BaseQRankSum=16.190;DP=1024;FS=4.681;HRun=0;HaplotypeScore=355.3332;InbreedingCoeff=0.8114;MQ=52.34;MQ0=9;MQRankSum=-15.322;QD=7.74;ReadPosRankSum=-5.655;VQSLOD=1.8153;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:13,12:28:12.08:139,12,0	0/0:16,0:16:48.11:0,48,882	0/0:60,0:34:72.30:0,72,1061	0/0:50,1:36:83.15:0,83,1493	0/0:26,0:26:78.26:0,78,1445	0/0:32,0:32:84.02:0,84,1534	0/0:42,0:42:99:0,120,2185	0/0:56,0:55:99:0,162,2766	1/1:7,33:40:52.46:565,52,0	0/0:59,0:59:99:0,172,3130	0/0:21,0:21:62.96:0,63,1076	1/1:4,35:38:44.46:526,44,0	1/1:7,29:36:42.83:467,43,0	1/1:8,34:42:7.49:334,7,0	0/0:72,0:72:99:0,205,3686	0/0:72,0:72:99:0,217,4016	0/0:31,0:31:90.31:0,90,1670	0/0:31,0:31:84.25:0,84,1536	1/1:6,7:13:26.95:334,27,0	0/1:4,12:16:27.97:45,0,28	1/1:28,12:46:0.60:10,1,0	1/1:9,26:35:10.18:118,10,0	1/1:5,9:14:8.13:88,8,0	1/1:11,19:31:0.03:14,0,0	0/0:31,0:31:87.27:0,87,1605	0/0:56,0:55:99:0,166,3069	1/1:3,17:20:37.92:372,38,0	1/1:4,2:6:5.93:40,6,0
chr10	45672054	.	TAC	T	1314.59	PASS	AB=0.973;AC=16;AF=0.286;AN=56;BaseQRankSum=8.686;DP=1069;FS=33.275;HRun=0;HaplotypeScore=351.5296;InbreedingCoeff=0.2650;MQ=52.94;MQ0=5;MQRankSum=-1.501;QD=3.73;ReadPosRankSum=-9.093;VQSLOD=0.4216;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,2:29:6.67:0,7,18	0/0:17,0:17:48.16:0,48,911	0/0:50,0:37:99:0,100,1754	0/0:50,0:39:94.04:0,94,1776	0/0:34,0:34:99:0,102,1816	0/0:31,0:31:81.05:0,81,1532	0/0:55,0:55:99:0,155,2966	0/0:57,0:57:99:0,166,3017	0/1:39,1:40:63.85:68,0,64	0/0:58,0:58:99:0,169,3133	0/0:22,0:22:66.21:0,66,1213	0/1:41,1:41:24.32:215,0,24	0/1:36,3:39:60.68:102,0,61	0/1:40,1:40:39.61:94,0,40	0/0:75,0:75:99:0,223,4162	0/0:72,0:72:99:0,214,4029	0/0:42,0:42:99:0,120,2128	0/0:30,0:30:84.29:0,84,1580	1/1:12,3:15:12.96:215,13,0	1/1:17,2:18:3.07:155,3,0	1/1:45,0:53:8.10:135,8,0	0/1:24,0:24:8.05:80,0,8	0/1:11,0:11:10.01:36,0,10	1/1:33,2:35:3.16:104,3,0	0/0:43,0:43:99:0,117,2181	0/0:52,0:52:99:0,150,2779	0/1:23,2:25:58.82:117,0,59	0/1:8,0:8:1.96:158,0,2
chr10	45672301	.	C	CATA	160.88	PASS	AB=1.000;AC=16;AF=0.308;AN=52;BaseQRankSum=5.922;DP=943;FS=0.000;HRun=0;HaplotypeScore=178.5254;InbreedingCoeff=0.6649;MQ=59.13;MQ0=14;MQRankSum=-5.043;QD=0.70;ReadPosRankSum=-2.043;VQSLOD=2.4446;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:34,0:33:0:0,0,0	0/0:15,0:15:45.15:0,45,800	0/0:60,0:27:68.85:0,69,1097	0/0:94,0:55:99:0,110,1871	0/0:31,0:31:93.31:0,93,1684	0/0:25,0:25:72.25:0,72,1329	0/0:32,0:32:90.31:0,90,1678	0/0:49,0:49:99:0,114,2473	1/1:26,0:26:5.49:23,5,0	0/0:54,0:52:99:0,147,2700	0/0:19,0:18:50.90:0,51,917	0/1:31,0:31:0.86:14,0,1	0/1:20,0:20:0.31:0,0,0	1/1:31,0:31:2.47:54,2,0	0/0:54,0:54:99:0,160,2945	0/0:46,0:46:99:0,138,2451	0/0:49,0:50:99:0,110,2643	0/0:30,0:29:81.28:0,81,1474	1/1:15,0:14:9.07:122,9,0	./.	1/1:24,5:33:1.68:8,2,0	0/1:22,0:22:0:0,0,0	0/0:12,0:11:0:0,0,0	./.	0/0:32,0:31:87.25:0,87,1560	0/0:64,0:61:99:0,181,3274	1/1:6,0:6:2.65:20,3,0	1/1:11,0:11:3.01:57,3,0
chr10	45674703	.	CT	C	5339.40	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=11.529;DP=547;FS=1.920;HRun=9;HaplotypeScore=83.4565;InbreedingCoeff=0.9630;MQ=80.05;MQ0=0;MQRankSum=-0.081;QD=22.82;ReadPosRankSum=4.381;VQSLOD=5.4754;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,23:24:63.03:577,63,0	0/0:11,0:11:33.10:0,33,381	0/0:13,0:13:33.10:0,33,381	0/0:15,1:16:3.36:0,3,264	0/0:22,0:22:57.15:0,57,639	0/0:3,0:19:35.16:0,35,187	0/0:4,0:16:37.30:0,37,207	0/0:35,0:35:93.28:0,93,1073	1/1:0,13:14:35.06:308,35,0	0/0:27,0:27:78.22:0,78,886	0/0:20,0:20:45.11:0,45,498	1/1:2,13:15:33:302,33,0	1/1:1,8:9:6.20:199,6,0	1/1:1,13:15:41.06:363,41,0	0/0:19,0:19:45.11:0,45,503	0/0:22,0:22:63.17:0,63,709	0/0:23,0:23:60.13:0,60,651	0/0:16,0:16:48.10:0,48,538	1/1:1,18:20:56.05:495,56,0	1/1:2,23:25:60.01:549,60,0	1/1:0,11:11:30.02:275,30,0	1/1:6,20:26:25.41:487,25,0	1/1:2,16:18:39.02:357,39,0	1/1:1,14:15:42.02:384,42,0	0/0:26,0:26:72.20:0,72,823	0/0:28,0:28:72.19:0,72,813	1/1:0,25:25:69.04:632,69,0	1/1:2,15:17:45.02:412,45,0
chr10	45675391	.	G	GC	145.79	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=0.639;DP=615;FS=1.640;HRun=5;HaplotypeScore=59.2699;InbreedingCoeff=0.9856;MQ=87.46;MQ0=0;MQRankSum=-2.682;QD=20.83;ReadPosRankSum=0.859;VQSLOD=2.9620;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:93.22:0,93,991	1/1:0,7:7:18.06:236,18,0	0/0:15,0:15:30.07:0,30,320	0/0:37,0:37:90.21:0,90,956	0/0:16,0:16:42.10:0,42,451	0/0:19,0:19:51.13:0,51,548	0/0:29,0:29:78.12:0,78,805	0/0:26,0:26:72.16:0,72,760	0/0:27,0:27:75.18:0,75,805	0/0:24,0:24:69.17:0,69,740	0/0:11,0:11:30.07:0,30,322	0/0:24,0:24:57.11:0,57,603	0/0:24,0:24:60.14:0,60,643	0/0:24,0:24:63.15:0,63,677	0/0:23,0:23:66.16:0,66,709	0/0:23,0:23:63.16:0,63,677	0/0:42,0:41:99:0,108,1151	0/0:33,0:33:96.18:0,96,1009	0/0:12,0:12:30.08:0,30,322	0/0:8,0:8:23.09:0,23,231	0/0:40,0:40:99:0,102,1096	0/0:11,0:11:33.08:0,33,354	0/0:10,0:10:27.07:0,27,290	0/0:21,0:21:60.15:0,60,645	0/0:16,0:16:45.11:0,45,484	0/0:20,0:20:45.09:0,45,469	0/0:31,0:30:90.19:0,90,949	0/0:9,0:9:27.02:0,27,270
chr10	45675573	.	TG	T	15978.82	PASS	AB=0.530;AC=29;AF=0.518;AN=56;BaseQRankSum=19.094;DP=722;FS=4.401;HRun=1;HaplotypeScore=101.6219;InbreedingCoeff=0.9284;MQ=83.93;MQ0=0;MQRankSum=-3.861;QD=40.15;ReadPosRankSum=3.018;VQSLOD=5.1102;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,37:37:99:1510,108,0	0/0:10,0:10:30.09:0,30,456	0/0:20,0:20:54.17:0,54,800	0/0:25,0:26:61.86:0,62,870	0/0:26,0:26:78.27:0,78,1245	0/0:21,0:21:63.21:0,63,1007	0/0:38,0:38:99:0,114,1797	1/1:0,26:26:78.26:1091,78,0	1/1:0,26:26:78.26:1091,78,0	0/0:28,0:28:84.28:0,84,1319	0/0:22,0:22:66.17:0,66,980	1/1:0,23:23:66.22:923,66,0	1/1:0,24:24:69.23:965,69,0	1/1:0,25:25:75.25:1049,75,0	0/0:31,0:31:93.32:0,93,1487	0/0:28,0:28:84.29:0,84,1341	0/0:18,0:18:54.17:0,54,840	0/0:26,0:26:78.22:0,78,1215	1/1:0,18:18:54.15:735,54,0	1/1:0,30:30:87.29:1217,87,0	1/1:0,44:44:99:1804,129,0	1/1:0,17:17:51.17:713,51,0	1/1:0,27:27:75.25:1049,75,0	1/1:0,23:23:63.21:875,63,0	0/0:30,0:30:90.31:0,90,1437	0/1:4,31:35:86.57:1194,0,87	1/1:0,31:31:90.30:1258,90,0	1/1:0,12:12:36.12:504,36,0
chr10	45676196	.	ATG	A	5259.03	PASS	AB=0.943;AC=15;AF=0.268;AN=56;BaseQRankSum=-10.253;DP=909;FS=13.648;HRun=0;HaplotypeScore=273.2202;InbreedingCoeff=0.8829;MQ=58.54;MQ0=5;MQRankSum=11.292;QD=21.29;ReadPosRankSum=6.680;VQSLOD=3.5508;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:44.54:0,45,310	0/0:12,0:12:33.11:0,33,529	0/0:46,0:14:8.97:0,9,143	0/0:31,0:16:11.14:0,11,169	1/1:8,18:27:57.01:665,57,0	0/0:11,0:32:39:0,39,359	0/0:15,0:40:57.45:0,57,498	0/0:41,0:41:53.88:0,54,500	0/0:41,0:41:41.60:0,42,292	1/1:12,24:37:74.85:835,75,0	1/1:5,16:21:33.10:398,33,0	0/0:39,0:39:47.66:0,48,356	0/0:36,0:36:38.67:0,39,271	0/0:33,0:33:35.65:0,36,261	1/1:5,32:38:84.09:991,84,0	1/1:5,27:35:77.73:874,78,0	0/0:45,3:48:17.83:0,18,1734	1/1:7,23:30:65.79:768,66,0	0/0:19,0:19:20.81:0,21,162	0/0:31,0:31:19.46:0,19,144	0/0:36,0:36:14.67:0,15,124	0/0:34,0:34:17.87:0,18,144	0/0:19,0:19:17.87:0,18,134	0/0:37,0:37:17.70:0,18,112	1/1:5,20:26:60.02:702,60,0	0/1:31,2:33:25.48:25,0,409	0/0:30,0:30:41.64:0,42,339	0/0:15,0:14:26.79:0,27,218
chr10	45676197	.	T	TGC	8066.75	PASS	AB=0.836;AC=30;AF=0.536;AN=56;BaseQRankSum=8.981;DP=909;FS=9.998;HRun=0;HaplotypeScore=282.7398;InbreedingCoeff=0.7565;MQ=58.43;MQ0=6;MQRankSum=-11.665;QD=14.51;ReadPosRankSum=-4.611;VQSLOD=2.6472;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:24,17:41:71.44:745,71,0	0/0:12,0:12:36.11:0,36,527	0/0:51,0:14:22.62:0,23,271	0/0:31,0:16:33.82:0,34,392	0/0:27,0:27:77.53:0,78,573	0/1:33,0:33:71.17:71,0,74	0/1:40,0:40:91.94:92,0,126	1/1:40,0:40:99:754,105,0	1/1:12,28:41:56.96:753,57,0	0/0:36,0:36:95.60:0,96,746	0/0:21,0:21:44.74:0,45,333	1/1:22,17:39:80.36:841,80,0	1/1:20,15:35:65.20:704,65,0	1/1:21,11:32:33.27:570,33,0	0/0:37,0:37:95.50:0,96,711	0/0:35,0:35:89.52:0,90,667	0/0:48,0:48:99:0,138,1863	0/0:29,0:29:73.45:0,73,541	1/1:15,4:19:51.98:458,52,0	1/1:23,8:31:50.53:469,51,0	1/1:31,4:35:29.54:223,30,0	0/1:11,24:35:0.53:249,0,1	1/1:10,9:19:30.07:350,30,0	1/1:8,29:37:14.50:185,14,0	0/0:26,0:26:74.64:0,75,562	1/1:22,11:33:17.54:691,18,0	1/1:19,11:31:62.75:624,63,0	0/1:10,5:14:5.68:290,0,6
chr10	45676200	.	G	GTGTGTGTGTA	23026.33	PASS	AB=0.792;AC=24;AF=0.429;AN=56;BaseQRankSum=3.061;DP=937;FS=7.071;HRun=0;HaplotypeScore=340.9532;InbreedingCoeff=0.2184;MQ=56.97;MQ0=6;MQRankSum=-14.218;QD=37.32;ReadPosRankSum=-2.037;VQSLOD=2.7356;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:22,17:47:20.16:1912,0,20	0/0:13,0:13:36.11:0,36,1024	0/0:53,0:13:20.69:0,21,275	0/1:31,0:16:1.70:2,0,241	0/0:24,0:24:63.18:0,63,1357	0/1:33,0:33:20.74:587,0,21	0/1:40,0:40:45.61:704,0,46	0/1:32,0:49:21.47:2118,0,21	1/1:26,14:40:56.88:2505,57,0	0/0:32,0:33:84.16:0,84,1728	0/0:20,0:20:36.11:0,36,782	0/1:20,15:42:3.47:1634,0,3	1/1:18,13:32:24.36:1994,24,0	1/1:20,10:31:1.38:1367,1,0	0/0:38,0:38:84.29:0,84,1975	0/0:37,0:37:87.24:0,87,1848	0/0:48,0:48:99:0,135,3597	0/0:28,0:28:69.20:0,69,1511	0/1:14,3:30:1.08:1546,0,1	0/1:22,8:30:41.44:1032,0,41	0/1:30,4:34:19.54:579,0,20	1/1:27,7:34:26.81:890,27,0	1/1:9,9:18:27.09:1119,27,0	1/1:29,10:39:10.67:460,11,0	0/0:26,0:26:63.20:0,63,1427	0/1:15,11:40:99:2233,0,100	0/1:20,9:31:4.99:1571,0,5	0/1:11,5:15:3.23:775,0,3
chr10	45676202	.	G	GTGTGTGTA	15932.33	PASS	AB=0.990;AC=21;AF=0.375;AN=56;BaseQRankSum=13.874;DP=929;FS=7.657;HRun=0;HaplotypeScore=336.1519;InbreedingCoeff=-0.1187;MQ=56.25;MQ0=6;MQRankSum=-15.463;QD=26.29;ReadPosRankSum=2.835;VQSLOD=3.1225;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:46,0:46:17.42:1302,0,17	0/0:13,0:13:36.11:0,36,906	0/0:56,0:13:20.70:0,21,265	0/1:30,0:15:0.14:0,0,229	0/0:24,0:24:63.18:0,63,1133	0/1:32,0:32:20.83:735,0,21	0/1:39,0:39:32.45:929,0,32	0/1:47,0:47:43.90:1416,0,44	1/1:38,1:39:56.93:1702,57,0	0/0:32,0:33:84.18:0,84,1455	0/0:20,0:20:36.11:0,36,649	0/1:41,1:42:24.75:1049,0,25	1/1:31,1:32:24.36:1335,24,0	0/1:29,0:29:35.19:876,0,35	0/0:39,0:39:90.28:0,90,1669	0/0:36,0:36:93.24:0,93,1618	0/0:49,0:49:99:0,135,3155	0/0:28,0:28:72.19:0,72,1272	0/1:29,1:30:99:1022,0,125	0/1:28,0:28:62.53:647,0,63	0/1:34,0:34:10.16:360,0,10	0/1:30,1:31:16.07:614,0,16	1/1:18,0:18:7.13:725,7,0	0/1:38,1:39:24.97:350,0,25	0/0:25,0:25:63.20:0,63,1177	0/1:42,0:42:99:1353,0,135	0/1:29,0:30:47.53:1078,0,48	0/1:18,0:17:66.15:440,0,66
chr10	45676211	.	T	TATGTGTGTGTG	18318.89	PASS	AB=1.000;AC=20;AF=0.357;AN=56;BaseQRankSum=8.636;DP=917;FS=9.859;HRun=0;HaplotypeScore=342.0985;InbreedingCoeff=-0.1095;MQ=56.04;MQ0=6;MQRankSum=-13.987;QD=33.25;ReadPosRankSum=4.151;VQSLOD=2.8424;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:48,0:48:99:2113,0,111	0/0:12,0:12:36.12:0,36,1232	0/0:62,0:17:26.41:0,26,419	0/0:32,0:17:13.78:0,14,397	0/0:24,0:24:69.20:0,69,1683	0/1:31,0:31:99:197,0,100	0/1:37,0:37:99:264,0,254	0/1:46,0:46:99:1255,0,635	0/1:37,0:37:64.19:1694,0,64	0/0:30,0:30:90.27:0,90,2183	0/0:21,0:21:48.14:0,48,1074	0/1:40,0:40:19.63:1698,0,20	1/1:19,1:30:39.03:1703,39,0	0/1:34,0:34:99:1250,0,240	0/0:38,0:38:99:0,99,2532	0/0:41,0:41:99:0,99,2417	0/0:53,0:53:99:0,153,4535	0/0:30,0:30:84.09:0,84,1957	0/1:23,0:23:99:628,0,385	1/1:25,0:25:7.06:775,7,0	1/1:32,0:32:15.94:734,16,0	0/1:31,0:31:99:542,0,131	0/1:19,0:19:61.88:700,0,62	0/1:35,0:35:99:548,0,110	0/0:23,0:23:66.21:0,66,1710	0/1:39,0:39:99:1972,0,411	0/1:27,0:27:65.67:1552,0,66	0/1:17,0:16:99:692,0,174
chr10	45677004	.	CCAT	C	2529.73	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=3.780;DP=657;FS=1.679;HRun=0;HaplotypeScore=168.4934;InbreedingCoeff=0.9980;MQ=81.50;MQ0=0;MQRankSum=-8.836;QD=39.53;ReadPosRankSum=-3.136;VQSLOD=3.5865;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:90.29:0,90,2058	0/0:8,0:8:24.01:0,24,469	0/0:26,0:26:59.76:0,60,1640	0/0:21,0:21:56.98:0,57,1186	0/0:14,0:14:39.03:0,39,841	0/0:16,0:16:48.16:0,48,1135	0/0:22,0:22:63.22:0,63,1445	1/1:4,26:30:78.05:1184,78,0	0/0:27,0:27:81.28:0,81,1886	0/0:23,0:23:69.23:0,69,1557	0/0:16,0:15:45.14:0,45,981	0/0:18,0:18:54.19:0,54,1275	0/0:32,0:32:96.31:0,96,2217	0/0:31,0:31:90.30:0,90,2031	0/0:28,0:28:78.24:0,78,1748	0/0:29,0:29:87.28:0,87,2008	0/0:27,0:27:81.25:0,81,1792	0/0:28,0:28:81.28:0,81,1915	0/0:11,0:11:33.11:0,33,780	0/0:18,0:18:51.18:0,51,1184	0/0:24,0:24:72.23:0,72,1601	0/0:31,0:31:90.28:0,90,2010	0/0:21,0:21:63.22:0,63,1487	0/0:30,0:30:87.28:0,87,1976	0/0:22,0:22:66.23:0,66,1555	1/1:1,33:33:25.31:1467,25,0	0/0:17,0:17:51.18:0,51,1203	0/0:22,0:22:66.23:0,66,1531
chr10	45677282	.	TTGTGTGTGTGTGTG	T	2920.97	PASS	AB=0.858;AC=24;AF=0.444;AN=54;BaseQRankSum=6.902;DP=603;FS=0.000;HRun=0;HaplotypeScore=217.5720;InbreedingCoeff=0.4957;MQ=61.74;MQ0=18;MQRankSum=-5.531;QD=10.29;ReadPosRankSum=1.863;VQSLOD=2.5194;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:29,6:37:6.02:234,6,0	0/0:8,0:8:12.02:0,12,576	./.	0/0:16,0:11:3.01:0,3,39	0/0:19,0:19:9.03:0,9,405	1/1:12,1:15:12.04:302,12,0	0/1:30,0:33:19.50:151,0,20	0/0:25,0:23:16.09:0,16,329	1/1:13,1:15:5.97:118,6,0	0/0:25,0:26:44.36:0,44,2206	0/0:12,0:12:6.02:0,6,355	1/1:13,5:18:8.50:349,9,0	1/1:18,7:24:14.41:583,14,0	1/1:14,5:19:15.05:584,15,0	0/0:17,0:23:3.01:0,3,182	0/0:14,0:25:14.29:0,14,777	0/0:27,0:30:57.67:0,58,3137	0/0:27,0:29:47.37:0,47,2583	1/1:13,0:13:2.83:27,3,0	1/1:16,4:17:5.98:137,6,0	0/0:41,0:41:0.47:0,0,1	0/1:14,0:18:8.85:190,0,9	0/1:14,0:17:72.52:103,0,73	1/1:27,2:30:6.01:115,6,0	0/0:16,0:14:21.06:0,21,857	0/0:25,0:26:36.12:0,36,1268	1/1:6,4:10:2.57:116,3,0	0/1:9,0:9:3.50:92,0,4
chr10	45678607	.	TTC	T	10755.69	PASS	AB=0.917;AC=37;AF=0.661;AN=56;BaseQRankSum=11.525;DP=588;FS=8.297;HRun=0;HaplotypeScore=72.1986;InbreedingCoeff=0.9287;MQ=72.30;MQ0=10;MQRankSum=-2.610;QD=27.79;ReadPosRankSum=2.622;VQSLOD=5.7206;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,46:45:99:1489,117,0	1/1:3,6:8:15.05:191,15,0	0/0:23,0:21:48.06:0,48,665	0/0:19,0:14:24.06:0,24,359	0/0:18,0:18:45.15:0,45,753	1/1:0,21:20:51.16:649,51,0	1/1:4,19:23:45.14:573,45,0	1/1:5,11:16:33.11:418,33,0	1/1:4,18:22:51.16:649,51,0	0/0:27,0:27:63.21:0,63,1021	0/0:16,0:16:39.13:0,39,653	1/1:1,25:23:66.21:840,66,0	1/1:5,13:18:23.86:305,24,0	1/1:2,18:20:42.13:535,42,0	0/0:30,0:30:69:0,69,1301	0/1:10,1:11:5.04:5,0,469	0/0:27,0:27:66.22:0,66,1089	0/0:20,0:20:57.19:0,57,954	1/1:6,19:25:54.14:658,54,0	1/1:0,13:13:36.07:440,36,0	1/1:2,19:21:42.13:535,42,0	1/1:0,14:14:36.07:440,36,0	1/1:1,9:10:27.09:342,27,0	1/1:1,30:29:75.24:955,75,0	0/0:21,0:21:60.21:0,60,1004	1/1:1,20:21:9.95:661,10,0	1/1:3,25:28:63.20:802,63,0	1/1:1,10:11:21.07:267,21,0
chr10	45682699	.	TA	T	3756.38	PASS	AB=1.000;AC=16;AF=0.286;AN=56;BaseQRankSum=13.479;DP=573;FS=1.622;HRun=9;HaplotypeScore=65.3489;InbreedingCoeff=0.8272;MQ=70.55;MQ0=2;MQRankSum=-1.731;QD=18.78;ReadPosRankSum=1.346;VQSLOD=3.9655;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:69.20:0,69,795	0/0:9,0:9:24.07:0,24,277	0/0:20,0:18:20.38:0,20,174	0/0:15,0:14:19.76:0,20,229	1/1:0,29:29:69.01:631,69,0	0/1:26,0:26:26.88:27,0,91	0/1:13,0:13:2.09:2,0,7	0/0:34,0:34:90.23:0,90,1003	0/0:22,0:22:66.19:0,66,753	1/1:4,32:35:98.99:891,99,0	1/1:1,15:16:42.01:384,42,0	0/0:15,0:15:45.13:0,45,519	0/0:23,0:23:57.17:0,57,657	0/0:21,0:21:60.17:0,60,684	1/1:0,12:12:33.02:302,33,0	1/1:3,22:25:63.03:577,63,0	0/0:22,0:21:56.97:0,57,631	1/1:1,24:25:47.65:558,48,0	0/0:16,0:16:23.55:0,24,447	0/0:19,0:19:57.16:0,57,647	0/0:8,0:8:21.06:0,21,242	0/0:20,0:20:54.16:0,54,623	0/0:16,0:16:42.12:0,42,484	0/0:19,0:19:45.13:0,45,519	1/1:2,16:18:42.02:384,42,0	0/0:25,3:28:1.75:0,2,719	0/0:29,0:29:87.22:0,87,975	0/0:10,0:10:27.08:0,27,312
chr10	45682708	.	AG	A	879.74	PASS	AB=1.000;AC=12;AF=0.214;AN=56;BaseQRankSum=14.953;DP=583;FS=3.648;HRun=1;HaplotypeScore=74.6636;InbreedingCoeff=0.3720;MQ=65.21;MQ0=3;MQRankSum=-2.424;QD=4.21;ReadPosRankSum=3.363;VQSLOD=0.8500;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:79.69:0,80,960	0/0:11,0:11:30.07:0,30,364	0/0:14,0:12:16.84:0,17,234	0/0:12,0:11:20.17:0,20,265	0/1:32,0:31:51.89:55,0,52	1/1:10,18:28:70.43:666,70,0	1/1:2,4:16:20.71:162,21,0	0/0:40,0:40:99:0,114,1334	0/0:22,0:22:63.18:0,63,823	0/1:36,0:35:17.88:18,0,62	0/1:16,0:16:20.28:24,0,20	0/0:15,0:15:45.14:0,45,577	0/0:21,0:21:63.17:0,63,792	0/0:21,0:21:62.94:0,63,799	0/1:14,0:14:12.79:13,0,32	0/1:24,0:24:20.69:32,0,21	0/0:24,0:23:66.08:0,66,790	1/1:26,0:26:9.26:57,9,0	0/0:16,0:16:41.52:0,42,563	0/0:22,0:22:66.18:0,66,822	0/0:8,0:8:24.06:0,24,292	0/0:19,0:19:57.17:0,57,730	0/0:16,0:16:48.13:0,48,596	0/0:17,0:17:50.93:0,51,603	0/1:17,0:17:8.10:19,0,8	0/0:30,0:30:82.61:0,83,1006	0/0:29,0:29:86.63:0,87,1079	0/0:10,0:10:30.08:0,30,382
chr10	45682710	.	AAAG	A	720.29	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.197;DP=592;FS=0.000;HRun=0;HaplotypeScore=100.1320;InbreedingCoeff=0.9821;MQ=65.91;MQ0=3;MQRankSum=-0.995;QD=16.01;ReadPosRankSum=-0.081;VQSLOD=2.9786;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:84.23:0,84,1710	0/0:11,0:11:27.09:0,27,621	0/0:14,0:12:13.89:0,14,342	0/0:13,0:12:18.12:0,18,310	0/0:31,0:30:81.27:0,81,1660	1/1:14,15:29:45.27:645,45,0	1/1:12,4:16:21.02:196,21,0	0/0:41,0:41:99:0,111,2223	0/0:22,0:22:63.20:0,63,1336	0/0:36,0:35:99:0,105,2069	0/0:16,0:16:48.16:0,48,1012	0/0:15,0:15:45.15:0,45,904	0/0:21,0:21:60.19:0,60,1285	0/0:22,0:22:66.19:0,66,1360	0/0:14,0:14:42.14:0,42,823	0/0:26,0:26:75.25:0,75,1536	0/0:24,0:23:66.18:0,66,1365	0/0:26,0:26:66.22:0,66,1356	0/0:16,0:16:45.62:0,46,895	0/0:22,0:22:66.21:0,66,1424	0/0:9,0:9:27.09:0,27,479	0/0:19,0:19:57.19:0,57,1198	0/0:17,0:17:48.16:0,48,1030	0/0:17,0:17:48.16:0,48,1035	0/0:17,0:17:45.15:0,45,887	0/0:29,0:29:84.28:0,84,1813	0/0:30,0:30:90.29:0,90,1754	0/0:10,0:10:30.10:0,30,678
chr10	45683400	.	GA	G	686.83	PASS	AB=0.944;AC=6;AF=0.107;AN=56;BaseQRankSum=4.776;DP=568;FS=0.676;HRun=8;HaplotypeScore=76.0087;InbreedingCoeff=0.7023;MQ=52.74;MQ0=21;MQRankSum=-1.524;QD=9.54;ReadPosRankSum=3.011;VQSLOD=1.6805;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:31:57.05:0,57,570	0/0:4,0:4:9.01:0,9,96	0/0:21,1:6:13.25:0,13,107	0/1:21,0:3:0:0,0,0	0/0:19,0:19:21.95:0,22,251	1/1:1,18:19:36.03:336,36,0	1/1:9,15:21:50.97:465,51,0	0/0:22,1:21:47.41:0,47,456	0/0:21,0:20:31.84:0,32,263	0/0:25,0:24:36.07:0,36,401	0/0:19,0:18:30.54:0,31,337	0/0:19,0:18:29.77:0,30,308	0/0:22,0:21:39.10:0,39,436	0/0:15,0:15:16.79:0,17,178	0/0:11,0:11:13.02:0,13,123	0/0:16,0:16:23.31:0,23,223	0/0:36,0:36:49.64:0,50,629	0/0:20,0:20:49.41:0,49,529	0/0:17,0:16:34.91:0,35,384	0/0:27,0:26:43.14:0,43,486	0/0:24,0:23:38.45:0,38,410	0/0:22,1:23:7.84:0,8,354	0/0:19,0:19:34.89:0,35,348	0/0:21,0:21:45.46:0,45,424	0/0:17,0:17:41.33:0,41,463	0/0:15,0:14:26.91:0,27,273	0/0:28,0:27:33.65:0,34,394	0/1:7,1:7:13.33:13,0,110
chr10	45683409	.	GAA	G	3106.46	PASS	AB=0.752;AC=29;AF=0.518;AN=56;BaseQRankSum=0.354;DP=573;FS=10.406;HRun=16;HaplotypeScore=78.8630;InbreedingCoeff=0.7368;MQ=59.20;MQ0=16;MQRankSum=0.550;QD=9.14;ReadPosRankSum=4.650;VQSLOD=0.9762;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:11,20:32:7.58:293,8,0	0/0:2,0:2:6.02:0,6,79	0/1:28,0:10:0.81:1,0,114	0/0:25,0:8:1.16:0,1,24	0/0:21,0:20:14.13:0,14,357	1/1:9,8:20:18.03:191,18,0	1/1:7,17:23:42.87:335,43,0	0/0:22,0:26:54.17:0,54,516	1/1:13,7:18:37.02:280,37,0	0/0:19,0:20:30.09:0,30,368	0/0:13,0:13:21.36:0,21,240	1/1:18,5:22:35.65:254,36,0	0/1:10,11:20:1.25:107,0,1	1/1:7,6:15:2.86:67,3,0	0/0:11,0:11:18.56:0,19,143	0/0:10,0:12:26.36:0,26,284	0/0:34,0:36:69.98:0,70,807	0/0:17,0:22:43.59:0,44,418	1/1:15,3:18:1.42:113,1,0	1/1:11,15:26:25.18:269,25,0	1/1:7,9:19:16:176,16,0	1/1:6,15:21:28.30:277,28,0	1/1:10,9:20:10.52:266,11,0	1/1:3,15:20:35.87:341,36,0	0/0:19,0:22:47.56:0,48,441	0/0:19,0:19:33.35:0,33,295	1/1:5,14:20:32.52:302,33,0	0/1:3,5:8:6.99:39,0,7
chr10	45684838	.	AT	A	3773.02	PASS	AB=0.900;AC=29;AF=0.518;AN=56;BaseQRankSum=-0.223;DP=467;FS=5.635;HRun=12;HaplotypeScore=56.6831;InbreedingCoeff=0.8542;MQ=67.89;MQ0=4;MQRankSum=1.970;QD=15.15;ReadPosRankSum=1.306;VQSLOD=4.5768;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:26:56.87:0,57,536	0/0:1,0:2:2.84:0,3,14	0/0:11,0:11:17.85:0,18,155	0/0:11,0:8:11.59:0,12,90	1/1:2,10:10:20.91:163,21,0	0/0:5,0:18:26.12:0,26,133	0/0:3,0:11:14.27:0,14,73	1/1:7,21:28:62.73:485,63,0	0/1:7,1:9:2.36:2,0,146	1/1:3,9:12:23.88:185,24,0	1/1:3,12:16:43.82:323,44,0	0/0:15,0:15:39.05:0,39,383	0/0:13,0:13:30.93:0,31,299	0/0:15,0:15:36.02:0,36,348	1/1:2,18:20:50.80:394,51,0	1/1:1,10:11:26.89:209,27,0	0/0:31,1:32:56.86:0,57,725	1/1:3,20:23:29.21:410,29,0	1/1:7,14:20:14.35:292,14,0	1/1:5,13:18:35.80:277,36,0	1/1:2,15:17:5.43:225,5,0	0/0:11,0:11:24.04:0,24,238	0/0:21,0:21:54.10:0,54,541	0/0:28,2:29:30.83:0,31,484	1/1:5,6:11:17.71:129,18,0	1/1:4,15:18:41.81:325,42,0	1/1:9,8:18:4.93:168,5,0	1/1:1,12:14:1.49:184,1,0
chr10	45684943	.	AT	A	784.40	PASS	AC=4;AF=0.074;AN=54;BaseQRankSum=6.385;DP=354;FS=19.354;HRun=9;HaplotypeScore=40.2728;InbreedingCoeff=0.8203;MQ=75.12;MQ0=5;MQRankSum=-0.997;QD=19.61;ReadPosRankSum=0.735;VQSLOD=2.1840;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:78.17:0,78,874	./.	0/0:16,0:7:11.54:0,12,137	0/0:15,0:12:12.58:0,13,139	0/0:11,0:11:27.08:0,27,312	1/1:2,12:14:36.02:329,36,0	1/1:3,23:25:63.03:576,63,0	0/0:30,0:30:75.20:0,75,854	0/0:14,0:14:23.10:0,23,329	0/0:12,0:12:36.11:0,36,415	0/0:15,0:15:33.10:0,33,381	0/0:14,0:14:30.07:0,30,329	0/0:8,0:7:15.03:0,15,165	0/0:10,0:10:24.06:0,24,270	0/0:5,0:5:15.04:0,15,173	0/0:7,0:7:17.89:0,18,188	0/0:18,0:16:42.12:0,42,481	0/0:12,0:12:24.01:0,24,251	0/0:11,0:11:27.07:0,27,303	0/0:11,0:11:33.03:0,33,346	0/0:13,0:12:30.08:0,30,337	0/0:9,1:10:2.64:0,3,284	0/0:7,0:7:12.02:0,12,129	0/0:8,0:8:18.05:0,18,208	0/0:5,0:5:15.04:0,15,173	0/0:17,0:17:48.13:0,48,546	0/0:13,0:12:39.04:0,39,413	0/0:3,0:3:9.03:0,9,104
chr10	45684988	.	AACACACACAC	A	620.40	PASS	AB=0.750;AC=11;AF=0.289;AN=38;BaseQRankSum=2.836;DP=294;FS=12.301;HRun=0;HaplotypeScore=84.6247;InbreedingCoeff=0.4717;MQ=78.28;MQ0=11;MQRankSum=-3.016;QD=9.54;ReadPosRankSum=0.192;VQSLOD=0.7145;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:18.06:0,18,280	./.	./.	./.	0/0:4,0:6:3.01:0,3,32	1/1:9,0:10:3.01:70,3,0	./.	./.	0/0:8,0:8:6.02:0,6,85	./.	1/1:7,5:12:11.91:144,12,0	0/0:4,0:10:2.60:0,3,10	0/1:6,0:7:4.50:24,0,5	0/0:4,0:4:3.01:0,3,41	1/1:5,3:8:6.02:176,6,0	1/1:3,4:8:9.03:246,9,0	0/0:14,0:15:12.04:0,12,452	1/1:15,3:17:2.47:87,2,0	0/0:11,0:11:6.02:0,6,105	0/0:2,0:3:3.01:0,3,55	0/0:15,0:18:12.04:0,12,293	./.	./.	0/0:9,0:9:15.05:0,15,268	./.	0/0:8,0:8:7.27:0,7,116	0/0:8,0:6:2.98:0,3,22	0/0:2,0:3:3.01:0,3,51
chr10	45686747	.	GTT	G	7358.70	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=2.516;DP=633;FS=1.888;HRun=11;HaplotypeScore=89.8504;InbreedingCoeff=0.9937;MQ=65.77;MQ0=7;MQRankSum=0.486;QD=23.81;ReadPosRankSum=5.454;VQSLOD=4.7332;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,34:39:93.20:987,93,0	0/0:13,0:13:39.13:0,39,593	0/0:32,0:19:27.87:0,28,382	0/0:13,0:7:11.48:0,11,92	0/0:18,0:18:51.17:0,51,775	0/0:4,0:21:30.96:0,31,158	0/0:4,0:26:42.94:0,43,179	0/0:21,0:26:39.41:0,39,392	1/1:5,24:29:28.93:518,29,0	0/0:20,0:20:51.16:0,51,739	0/0:18,0:20:59.16:0,59,811	1/1:0,24:24:66.17:702,66,0	1/1:4,28:32:71.95:766,72,0	1/1:1,16:16:43.66:449,44,0	0/0:23,0:23:66.22:0,66,978	0/0:17,0:17:48.13:0,48,678	0/0:26,0:26:78.26:0,78,1199	0/0:19,0:18:44.49:0,44,615	1/1:3,18:23:59.92:588,60,0	1/1:5,21:26:63.11:667,63,0	1/1:4,18:22:36.07:383,36,0	1/1:5,24:30:68.74:683,69,0	1/1:1,14:14:33.08:349,33,0	1/1:2,24:26:60.14:639,60,0	0/0:14,0:14:36.10:0,36,516	0/0:9,0:32:70.10:0,70,576	1/1:2,17:19:42.08:447,42,0	1/1:2,5:7:18.02:181,18,0
chr10	45688079	.	CT	C	508.24	PASS	AB=0.841;AC=15;AF=0.268;AN=56;BaseQRankSum=2.561;DP=574;FS=4.221;HRun=16;HaplotypeScore=69.3310;InbreedingCoeff=0.3612;MQ=61.99;MQ0=9;MQRankSum=0.560;QD=2.57;ReadPosRankSum=3.518;VQSLOD=-0.5799;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:32:44.83:0,45,355	0/0:5,2:7:8.99:0,9,76	1/1:21,2:10:3.88:16,4,0	0/0:21,0:10:6.59:0,7,33	0/0:23,0:26:29.85:0,30,288	0/0:12,0:18:17.78:0,18,116	0/0:10,0:16:5.80:0,6,33	0/0:19,0:31:41.24:0,41,256	0/0:13,0:12:20.92:0,21,164	0/0:19,0:17:18.92:0,19,152	0/1:13,3:16:17.20:17,0,76	0/1:16,0:16:5.61:6,0,142	0/1:9,2:10:11.61:12,0,121	0/0:18,1:17:7.99:0,8,161	0/0:21,2:23:2.58:0,3,217	0/0:15,0:16:1.54:0,2,104	0/0:23,4:26:40.43:0,40,314	0/0:23,1:24:39.18:0,39,402	1/1:20,4:27:9.18:91,9,0	1/1:9,22:31:24.57:261,25,0	1/1:6,4:10:8.77:54,9,0	0/0:13,2:17:1.90:0,2,128	0/0:13,4:18:5.45:0,5,116	0/1:20,3:23:9.26:9,0,234	0/0:12,2:13:1.24:0,1,99	0/0:10,0:22:34.97:0,35,213	0/1:10,12:23:4.99:87,0,5	1/1:6,9:17:8.67:118,9,0
chr10	45688820	.	CT	C	1111.11	PASS	AB=0.996;AC=18;AF=0.321;AN=56;BaseQRankSum=17.033;DP=642;FS=3.180;HRun=10;HaplotypeScore=93.5198;InbreedingCoeff=0.0356;MQ=70.71;MQ0=0;MQRankSum=2.130;QD=3.39;ReadPosRankSum=5.392;VQSLOD=-0.2085;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:38,0:38:23.59:123,0,24	0/0:6,0:6:18.04:0,18,191	0/0:16,0:14:19.55:0,20,180	0/0:12,0:10:7.91:0,8,73	0/0:25,1:26:52.12:0,52,784	1/1:28,0:27:56.07:224,56,0	1/1:34,0:34:69.94:288,70,0	0/0:48,0:48:99:0,111,1184	0/1:19,0:19:45.15:90,0,45	0/0:20,0:20:57.14:0,57,618	0/0:27,0:27:46.75:0,47,700	0/1:21,0:21:43.91:44,0,69	0/1:26,0:26:20.34:87,0,20	1/1:14,0:14:16.77:48,17,0	0/0:21,2:23:34.11:0,34,579	0/0:26,0:26:75.17:0,75,805	0/0:36,1:38:79:0,79,1035	0/0:31,0:31:79.59:0,80,840	0/1:15,0:15:22.60:23,0,32	0/1:20,1:21:38.66:59,0,39	0/1:15,0:15:30.77:50,0,31	0/1:17,0:17:31.77:38,0,32	0/1:18,0:18:43.30:44,0,43	0/1:23,0:23:10.12:65,0,10	0/0:18,0:18:20.07:0,20,371	0/0:23,0:23:60.12:0,60,628	0/1:28,0:28:7.32:90,0,7	0/1:11,0:11:17.64:18,0,32
chr10	45688829	.	TTA	T	2168.12	PASS	AB=0.967;AC=9;AF=0.161;AN=56;BaseQRankSum=0.632;DP=634;FS=0.484;HRun=0;HaplotypeScore=99.2068;InbreedingCoeff=0.2972;MQ=72.55;MQ0=0;MQRankSum=-0.126;QD=13.64;ReadPosRankSum=0.034;VQSLOD=3.4811;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:15.02:0,15,124	0/0:7,0:7:21.05:0,21,314	0/0:18,0:16:26.98:0,27,311	0/0:11,0:9:11.94:0,12,121	0/0:30,0:30:89.98:0,90,1450	1/1:0,25:25:63.21:896,63,0	1/1:1,29:30:78:1057,78,0	0/0:40,0:40:99:0,120,1971	0/0:19,0:19:0.35:0,0,95	0/0:21,0:21:63.19:0,63,1057	0/0:24,0:24:49.81:0,50,1219	0/1:23,1:24:19.78:20,0,100	0/1:25,2:27:65.99:66,0,67	0/0:12,0:12:4.71:0,5,11	0/0:24,0:24:68.94:0,69,1110	0/0:28,0:28:84.21:0,84,1373	0/0:37,0:37:99:0,108,1724	0/0:30,0:30:90.20:0,90,1495	0/1:16,1:17:27.47:180,0,27	0/0:18,0:18:17.38:0,17,100	0/1:20,0:20:49.80:94,0,50	0/0:16,0:16:14.58:0,15,79	0/1:16,0:16:2.08:2,0,70	0/0:26,0:26:13.96:0,14,78	0/0:17,0:17:32.10:0,32,723	0/0:22,0:22:66.15:0,66,1030	0/0:28,0:28:15.38:0,15,67	0/0:7,0:7:8.34:0,8,55
chr10	45688830	.	TA	T	6697.37	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=14.445;DP=630;FS=5.569;HRun=6;HaplotypeScore=71.8381;InbreedingCoeff=0.9789;MQ=71.28;MQ0=0;MQRankSum=0.087;QD=20.86;ReadPosRankSum=6.175;VQSLOD=3.9994;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:4,34:38:87.22:927,87,0	0/0:7,0:7:18.02:0,18,198	0/0:18,0:15:20.76:0,21,158	0/0:11,0:9:5.12:0,5,50	0/0:31,0:31:80.76:0,81,953	1/1:25,0:24:61.37:349,61,0	1/1:30,0:30:70.08:400,70,0	0/0:41,0:41:99:0,108,1293	1/1:4,14:18:42.10:447,42,0	0/0:21,0:21:57.17:0,57,697	0/0:25,0:25:72.20:0,72,864	1/1:5,18:23:35.83:368,36,0	1/1:5,22:27:59.98:609,60,0	1/1:0,12:12:27.07:288,27,0	0/0:24,0:24:64:0,64,728	0/0:28,0:28:75.20:0,75,895	0/0:36,0:36:89.20:0,89,1045	0/0:30,0:30:84.11:0,84,1002	1/1:3,14:17:44.92:411,45,0	1/1:4,14:18:35.61:383,36,0	1/1:8,12:20:51.06:507,51,0	1/1:1,15:16:36.09:384,36,0	1/1:4,12:16:30.02:320,30,0	1/1:4,22:26:48.12:511,48,0	0/0:16,0:16:45.08:0,45,494	0/0:21,0:21:51.12:0,51,606	1/1:2,26:28:56.45:633,56,0	1/1:2,5:7:15.04:160,15,0
chr10	45689985	.	T	TCCTCTCTCTC	9174.55	PASS	AB=0.868;AC=35;AF=0.625;AN=56;BaseQRankSum=-0.792;DP=816;FS=2.946;HRun=0;HaplotypeScore=237.5575;InbreedingCoeff=0.4631;MQ=63.09;MQ0=34;MQRankSum=-0.181;QD=19.11;ReadPosRankSum=0.660;VQSLOD=3.8478;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:29:77.93:1001,78,0	0/0:10,0:10:19.57:0,20,250	0/0:88,0:22:41.07:0,41,356	0/0:115,0:45:87.57:0,88,673	0/0:21,0:40:60.68:0,61,556	1/1:28,0:26:52.80:529,53,0	1/1:18,0:19:35.85:602,36,0	0/1:34,0:32:68.35:68,0,634	1/1:11,0:11:29.55:329,30,0	0/1:32,0:31:99:222,0,359	0/1:17,0:15:99:111,0,186	1/1:16,0:16:33.36:310,33,0	0/1:11,0:14:20.68:558,0,21	1/1:19,0:21:48.02:860,48,0	0/1:16,0:28:24.83:25,0,278	0/0:15,0:28:23.10:0,23,302	0/0:25,0:34:68.62:0,69,1063	0/1:10,0:13:23.62:24,0,195	1/1:22,0:26:66.26:851,66,0	1/1:1,20:27:33.60:199,34,0	1/1:16,0:18:39.03:538,39,0	1/1:16,0:17:30.14:288,30,0	1/1:30,0:32:59.78:594,60,0	1/1:16,0:15:25.28:319,25,0	0/0:15,0:17:35.70:0,36,284	0/1:20,0:27:99:865,0,118	1/1:4,25:35:13.24:539,13,0	1/1:15,0:14:41.87:345,42,0
chr10	45693893	.	GT	G	2654.58	PASS	AB=0.735;AC=39;AF=0.696;AN=56;BaseQRankSum=4.124;DP=722;FS=3.498;HRun=16;HaplotypeScore=90.1467;InbreedingCoeff=0.0280;MQ=73.26;MQ0=5;MQRankSum=0.431;QD=4.11;ReadPosRankSum=2.186;VQSLOD=1.4740;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,15:29:5.19:130,5,0	0/0:7,0:9:14.64:0,15,97	0/1:35,0:19:9.30:9,0,32	0/0:30,0:13:2.98:0,3,22	1/1:8,2:28:35.95:130,36,0	0/1:26,0:26:7.69:8,0,24	1/1:21,0:21:1.15:16,1,0	0/1:15,13:29:64.99:132,0,65	1/1:6,20:26:30.67:298,31,0	1/1:14,1:29:31.21:100,31,0	1/1:10,2:34:48.66:178,49,0	1/1:6,10:16:20.36:125,20,0	0/1:12,18:31:33.96:206,0,34	1/1:7,10:17:9.50:157,9,0	1/1:8,0:27:27.95:80,28,0	1/1:8,0:25:30.43:88,30,0	0/0:32,1:36:31.91:0,32,420	1/1:4,0:22:20.12:75,20,0	0/1:13,8:22:40.24:114,0,40	0/1:15,17:34:32.47:138,0,32	0/1:8,5:15:4.45:69,0,4	0/1:26,7:34:23.49:23,0,392	1/1:8,14:24:12.47:136,12,0	1/1:9,10:24:6.95:133,7,0	1/1:6,0:14:12.14:35,12,0	0/1:23,19:45:32.15:237,0,32	0/1:15,12:28:11.85:150,0,12	0/1:2,7:9:7.25:57,0,7
chr10	45693908	.	TTA	T	990.36	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=3.617;DP=681;FS=1.748;HRun=0;HaplotypeScore=103.3269;InbreedingCoeff=0.6904;MQ=73.52;MQ0=3;MQRankSum=-1.003;QD=11.79;ReadPosRankSum=1.828;VQSLOD=3.6332;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:53.83:0,54,426	0/0:7,0:7:21.03:0,21,259	0/0:30,0:17:9.54:0,10,220	0/0:28,0:13:19.41:0,19,160	0/0:30,0:30:41.23:0,41,307	1/1:5,25:30:32.86:527,33,0	1/1:10,11:21:52:573,52,0	0/0:25,0:25:64.63:0,65,567	0/0:25,0:25:63.38:0,63,430	0/0:24,0:24:33.29:0,33,243	0/1:33,0:33:18.46:18,0,207	0/0:14,0:14:26.61:0,27,177	0/0:32,0:32:77.28:0,77,650	0/0:17,0:17:44.38:0,44,296	0/0:26,0:26:20.76:0,21,182	0/0:20,0:20:9.48:0,9,80	0/0:36,0:35:93.02:0,93,1179	0/0:22,0:22:3.91:0,4,81	0/0:21,0:20:49.42:0,49,438	0/0:30,0:30:73.51:0,74,605	0/0:16,0:15:29.40:0,29,252	0/0:35,0:35:92.26:0,92,1164	0/0:25,0:25:44.03:0,44,310	0/0:22,0:22:53.26:0,53,406	0/0:13,0:13:14.02:0,14,121	0/0:32,0:32:53.02:0,53,635	0/0:23,0:23:50.78:0,51,432	0/0:17,0:17:41.66:0,42,307
chr10	45695575	.	G	GA	24078.21	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-20.113;DP=1016;FS=0.235;HRun=0;HaplotypeScore=105.6609;InbreedingCoeff=1.0000;MQ=68.87;MQ0=2;MQRankSum=-1.317;QD=43.15;ReadPosRankSum=4.712;VQSLOD=4.5175;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,47:48:99:1918,121,0	0/0:14,0:14:42.14:0,42,585	0/0:47,0:43:98:0,98,1412	0/0:45,0:41:94.26:0,94,1273	0/0:32,0:32:96.31:0,96,1324	1/1:0,42:42:99:1919,120,0	1/1:3,34:37:96.33:1534,96,0	0/0:46,0:46:99:0,135,1854	1/1:0,42:42:99:2014,126,0	0/0:37,0:36:99:0,105,1448	0/0:25,0:25:75.25:0,75,1045	1/1:0,37:36:99:1631,102,0	1/1:0,37:37:90.31:1439,90,0	1/1:0,40:41:99:1756,111,0	0/0:34,0:34:99:0,99,1341	0/0:43,0:43:99:0,123,1718	0/0:28,0:28:81.27:0,81,1132	0/0:37,0:37:99:0,111,1551	1/1:0,36:36:99:1668,105,0	1/1:1,32:33:87.30:1391,87,0	1/1:3,47:50:99:2191,126,0	1/1:0,36:36:90.29:1439,90,0	1/1:0,29:29:84.29:1342,84,0	1/1:1,51:52:99:2206,138,0	0/0:27,0:27:72.22:0,72,989	0/0:43,0:43:99:0,126,1717	1/1:0,25:25:66.23:1055,66,0	1/1:0,13:13:36.12:575,36,0
chr10	45697342	.	C	CTTT	4072.62	PASS	AB=1.000;AC=27;AF=0.482;AN=56;BaseQRankSum=10.269;DP=524;FS=3.341;HRun=11;HaplotypeScore=88.9852;InbreedingCoeff=0.9313;MQ=77.78;MQ0=1;MQRankSum=-1.045;QD=15.43;ReadPosRankSum=0.642;VQSLOD=1.9206;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,1:32:55.90:482,56,0	0/0:9,0:9:24.02:0,24,270	0/1:16,0:17:7.18:7,0,263	0/0:14,0:14:11.04:0,11,136	0/0:22,0:22:38.93:0,39,451	0/0:18,0:18:51.12:0,51,585	0/0:9,0:10:30.02:0,30,333	0/0:29,0:29:62.98:0,63,706	1/1:3,3:22:40.16:401,40,0	0/0:15,0:15:36.02:0,36,411	0/0:13,0:13:33.02:0,33,372	1/1:5,0:23:41.84:322,42,0	1/1:4,0:20:43.43:358,43,0	1/1:2,0:17:30.54:231,31,0	0/0:21,0:21:57.14:0,57,665	0/0:22,0:22:44.99:0,45,525	0/0:26,0:27:69.05:0,69,781	0/0:15,0:15:31.44:0,31,383	1/1:5,1:20:44.86:395,45,0	1/1:1,0:19:44.89:411,45,0	1/1:2,0:10:22.19:196,22,0	1/1:1,0:13:25.13:194,25,0	1/1:3,0:10:14.96:146,15,0	1/1:2,0:18:38.85:298,39,0	0/0:24,0:24:60.04:0,60,678	0/0:20,0:21:44.96:0,45,506	1/1:2,0:19:40.04:301,40,0	1/1:2,1:20:38.87:331,39,0
chr10	45699823	.	A	ATG	158.48	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=1.801;DP=596;FS=15.658;HRun=0;HaplotypeScore=105.5878;InbreedingCoeff=0.6939;MQ=61.31;MQ0=6;MQRankSum=-0.985;QD=3.17;ReadPosRankSum=-2.933;VQSLOD=0.6258;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:60.01:0,60,706	0/0:11,0:11:27.09:0,27,343	0/0:26,0:18:35.29:0,35,478	0/1:11,0:8:20.12:20,0,108	0/0:23,0:23:32.89:0,33,405	1/1:4,13:17:6.02:100,6,0	1/1:3,19:22:9.50:152,10,0	0/0:35,0:35:41.69:0,42,885	0/0:21,0:21:48.15:0,48,605	0/0:32,0:31:75.20:0,75,948	0/0:22,0:22:39.12:0,39,495	0/0:16,0:16:33.09:0,33,405	0/0:12,0:12:23.92:0,24,263	0/0:19,0:19:33.97:0,34,490	0/0:23,0:23:36.11:0,36,450	0/0:19,0:19:39.12:0,39,486	0/0:38,0:37:73.91:0,74,936	0/0:20,0:20:48.12:0,48,578	0/0:20,0:20:42.71:0,43,494	0/0:27,0:27:60.65:0,61,751	0/0:12,0:12:27.09:0,27,343	0/0:15,0:15:30.08:0,30,368	0/0:23,0:23:39.09:0,39,479	0/0:21,0:21:17.98:0,18,491	0/0:21,0:21:45.14:0,45,571	0/0:27,0:27:75.23:0,75,937	0/0:16,0:16:29.87:0,30,410	0/0:13,0:12:24.02:0,24,286
chr10	45699836	.	TGAGAGAGAGAGAGAGAGA	T	4252.75	PASS	AB=0.607;AC=13;AF=0.241;AN=54;BaseQRankSum=9.194;DP=596;FS=0.000;HRun=0;HaplotypeScore=238.6222;InbreedingCoeff=0.8092;MQ=57.35;MQ0=9;MQRankSum=-5.700;QD=27.09;ReadPosRankSum=0.780;VQSLOD=3.5399;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:66.70:0,67,3747	0/0:11,0:11:9.03:0,9,585	./.	0/0:10,0:7:5.69:0,6,51	1/1:11,13:25:6.49:263,6,0	0/0:14,0:14:3.01:0,3,188	0/0:26,0:26:9.03:0,9,659	0/0:31,0:31:30.56:0,31,715	0/0:22,0:22:39.13:0,39,2292	1/1:17,13:29:35.73:986,36,0	1/1:15,5:20:8.85:181,9,0	0/0:16,0:18:24.08:0,24,1397	0/0:11,0:13:21.54:0,22,1369	0/0:19,0:19:27.55:0,28,1182	1/1:5,17:24:24.08:1122,24,0	0/1:6,9:17:0.24:1018,0,0	0/0:34,0:33:65.81:0,66,4301	1/1:14,5:19:5.60:155,6,0	0/0:20,0:20:30.09:0,30,1917	0/0:28,0:28:33.10:0,33,1427	0/0:14,0:14:18.06:0,18,1264	0/0:16,0:15:21.07:0,21,1223	0/0:18,0:18:30.10:0,30,1264	0/0:25,0:27:36.12:0,36,2257	1/1:13,7:22:12.04:527,12,0	0/0:32,0:32:66.23:0,66,3489	0/0:18,0:18:39.13:0,39,2225	0/0:12,0:11:12.04:0,12,683
chr10	45703040	.	CTGTG	C	832.32	PASS	AB=0.929;AC=22;AF=0.423;AN=52;BaseQRankSum=-2.782;DP=618;FS=22.445;HRun=0;HaplotypeScore=101.3468;InbreedingCoeff=0.6201;MQ=71.57;MQ0=17;MQRankSum=-0.338;QD=3.65;ReadPosRankSum=2.669;VQSLOD=0.4608;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:33.09:0,33,593	0/0:3,0:3:6.02:0,6,118	./.	0/0:35,0:24:0:0,0,0	0/1:10,0:11:0:0,0,0	0/0:19,0:19:21.05:0,21,391	0/0:32,0:33:21.07:0,21,397	0/0:26,0:25:2.76:0,3,7	0/0:20,0:21:36.12:0,36,696	0/1:15,1:16:22.72:60,0,23	1/1:9,0:9:3.01:46,3,0	0/0:22,0:23:24.04:0,24,360	0/0:11,0:19:3.01:0,3,53	0/0:15,0:22:5.85:0,6,100	1/1:14,6:20:9.03:138,9,0	1/1:12,5:17:12.03:166,12,0	0/0:25,0:30:8.97:0,9,96	1/1:16,7:23:9.03:138,9,0	1/1:16,0:14:3:27,3,0	1/1:11,0:10:0.47:1,0,0	1/1:43,0:43:6.49:90,6,0	0/0:14,0:15:17.78:0,18,271	0/0:16,0:15:10.26:0,10,139	0/0:39,0:41:33.11:0,33,586	1/1:6,6:13:6.49:93,6,0	1/1:35,0:33:5.92:71,6,0	1/1:10,1:13:17.99:171,18,0	./.
chr10	45703132	.	CCT	C	1576.31	PASS	AB=0.893;AC=22;AF=0.393;AN=56;BaseQRankSum=1.272;DP=663;FS=12.321;HRun=0;HaplotypeScore=103.2459;InbreedingCoeff=0.3186;MQ=74.92;MQ0=31;MQRankSum=0.940;QD=5.40;ReadPosRankSum=0.836;VQSLOD=2.1739;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:16,1:41:6.48:6,0,366	1/1:2,10:12:15.04:172,15,0	0/0:88,0:31:9.42:0,9,91	0/0:107,0:42:9.47:0,9,153	0/1:16,1:17:38.38:38,0,297	0/0:7,0:14:4.70:0,5,26	0/0:14,0:21:19.23:0,19,202	0/1:21,8:28:27.82:132,0,28	0/0:4,0:13:12.95:0,13,125	0/1:18,2:20:25.03:25,0,554	0/0:7,0:7:12.04:0,12,185	0/0:4,0:19:27.03:0,27,296	0/0:6,0:10:12.01:0,12,124	0/0:9,0:9:11.99:0,12,119	0/0:15,0:15:23.88:0,24,370	0/1:14,1:15:32.04:32,0,418	0/1:15,0:15:38.31:38,0,333	0/0:18,0:18:30.02:0,30,434	1/1:12,6:16:12.03:132,12,0	1/1:5,8:13:2.03:172,2,0	1/1:18,20:37:32.50:315,33,0	1/1:4,0:13:14.20:69,14,0	0/0:15,0:15:27.86:0,28,249	0/0:11,0:31:36.01:0,36,345	0/1:16,1:17:47.52:48,0,294	0/1:9,9:17:52.53:232,0,53	1/1:6,7:12:12.03:137,12,0	1/1:5,7:12:20.80:218,21,0
chr10	45706877	.	AAAG	A	1628.60	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.497;DP=534;FS=2.035;HRun=0;HaplotypeScore=72.0038;InbreedingCoeff=0.9562;MQ=63.17;MQ0=1;MQRankSum=0.003;QD=30.73;ReadPosRankSum=-3.751;VQSLOD=2.9999;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:34:99:0,99,2045	0/0:11,0:11:27.09:0,27,549	0/0:11,0:5:8.84:0,9,175	0/0:10,0:8:19.37:0,19,324	0/0:16,0:16:39.13:0,39,771	0/0:20,0:20:51.17:0,51,1033	0/0:12,0:12:33.11:0,33,660	1/1:5,24:29:72.14:886,72,0	0/0:16,0:15:39.10:0,39,752	0/0:32,0:31:84.28:0,84,1633	0/0:17,0:17:39.13:0,39,806	0/0:18,0:18:45.14:0,45,873	0/0:23,0:23:48.16:0,48,957	0/0:21,0:21:54.17:0,54,1070	0/0:16,0:16:39.09:0,39,694	0/0:17,0:16:45.14:0,45,881	0/0:18,0:18:42.08:0,42,824	0/0:28,0:26:60.19:0,60,1180	0/0:25,0:23:69.21:0,69,1287	0/0:24,0:24:60.21:0,60,1187	0/0:7,0:7:21.06:0,21,397	0/0:13,0:13:30.10:0,30,620	0/0:16,0:16:45.14:0,45,885	0/0:6,0:6:15.05:0,15,310	0/0:26,0:26:69.20:0,69,1298	1/1:1,23:24:68.97:864,69,0	0/0:27,0:26:66.14:0,66,1244	0/0:15,0:15:45.13:0,45,889
chr10	45709338	.	T	TACACACACAC	8432.03	PASS	AB=0.985;AC=29;AF=0.518;AN=56;BaseQRankSum=5.689;DP=525;FS=8.311;HRun=0;HaplotypeScore=198.5151;InbreedingCoeff=0.7874;MQ=56.64;MQ0=3;MQRankSum=-9.680;QD=33.59;ReadPosRankSum=-0.705;VQSLOD=3.6705;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:16:11.95:445,12,0	0/0:8,0:8:21.07:0,21,606	0/1:14,0:4:1.50:2,0,28	0/1:13,0:9:6.08:6,0,67	0/0:27,0:27:60.15:0,60,1555	0/0:14,0:14:30.09:0,30,775	0/1:20,0:21:12.16:12,0,1172	0/0:37,0:37:51.12:0,51,1105	1/1:12,1:13:15.05:529,15,0	0/0:28,0:28:60.17:0,60,1386	0/0:16,0:16:45.15:0,45,1345	1/1:9,0:8:9.03:252,9,0	1/1:9,5:14:11.96:479,12,0	1/1:11,3:15:24.07:795,24,0	0/0:23,0:22:48.10:0,48,1266	0/0:14,0:14:33.11:0,33,974	0/0:30,0:30:78.22:0,78,2061	0/0:23,0:23:60.18:0,60,1640	1/1:11,1:11:9.03:338,9,0	1/1:6,9:16:18.05:767,18,0	1/1:26,1:24:6.84:411,7,0	1/1:8,8:16:17.70:866,18,0	1/1:6,12:18:23.46:1121,23,0	1/1:15,2:17:17.75:721,18,0	0/0:19,0:19:41.72:0,42,1129	0/0:34,0:33:28.43:0,28,2016	1/1:7,6:13:15.05:687,15,0	1/1:6,7:14:24.08:1001,24,0
chr10	45709466	.	CCA	C	6178.78	PASS	AB=0.728;AC=37;AF=0.661;AN=56;BaseQRankSum=5.934;DP=772;FS=26.066;HRun=0;HaplotypeScore=156.2861;InbreedingCoeff=0.5749;MQ=45.10;MQ0=71;MQRankSum=0.495;QD=12.64;ReadPosRankSum=6.367;VQSLOD=2.6047;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,19:26:23.85:273,24,0	0/0:10,0:9:18.06:0,18,291	0/0:57,0:3:3.81:0,4,19	0/0:68,0:5:6.02:0,6,84	1/1:5,22:26:36.12:450,36,0	0/1:23,1:24:4.42:4,0,453	0/0:32,0:32:50.61:0,51,718	0/0:40,1:36:43.68:0,44,1125	1/1:9,10:18:30.05:356,30,0	1/1:13,18:26:8.73:586,9,0	1/1:2,7:8:12.04:150,12,0	0/1:7,10:16:13.37:306,0,13	1/1:2,6:8:21.07:263,21,0	1/1:8,17:23:23.75:298,24,0	1/1:3,17:19:29.74:357,30,0	1/1:10,15:23:29.90:357,30,0	0/0:44,0:43:90.44:0,90,1568	0/1:8,16:24:6.18:406,0,6	0/1:23,7:18:68.82:257,0,69	0/1:7,10:17:20.72:169,0,21	1/1:32,50:74:38.07:536,38,0	1/1:5,10:13:14.98:188,15,0	1/1:5,5:11:15.05:187,15,0	1/1:8,28:36:16.46:221,16,0	1/1:4,11:14:15.05:188,15,0	0/0:29,0:24:54.18:0,54,856	1/1:5,7:12:27.08:332,27,0	1/1:2,7:8:24.07:294,24,0
chr10	45709496	.	TCACA	T	842.78	PASS	AB=0.980;AC=27;AF=0.540;AN=50;BaseQRankSum=2.029;DP=702;FS=0.000;HRun=0;HaplotypeScore=172.1035;InbreedingCoeff=0.4193;MQ=41.40;MQ0=63;MQRankSum=-1.835;QD=2.75;ReadPosRankSum=0.559;VQSLOD=2.2847;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:23:0:0,0,0	0/0:7,0:6:6.91:0,7,137	./.	./.	./.	1/1:7,12:21:14.92:237,15,0	1/1:24,3:27:8.50:141,8,0	0/0:32,0:29:17.10:0,17,282	1/1:13,0:12:2.73:27,3,0	0/1:23,0:21:6.56:7,0,50	0/0:10,0:13:8.23:0,8,37	0/0:17,0:16:0.47:0,0,2	1/1:8,0:8:8.94:66,9,0	1/1:22,0:20:5.67:54,6,0	0/0:12,7:22:2.74:0,3,13	1/1:17,5:22:5.89:95,6,0	0/1:42,2:43:77.62:78,0,951	1/1:21,0:20:2.68:133,3,0	1/1:25,0:16:9:94,9,0	0/0:13,0:13:2.53:0,3,24	0/0:66,0:52:6.19:0,6,138	0/1:14,0:12:0:0,0,0	0/1:9,0:9:0:0,0,0	0/0:36,0:35:0:0,0,0	1/1:7,1:10:3.01:47,3,0	0/0:24,0:22:32.15:0,32,654	1/1:8,0:8:0.47:1,0,0	1/1:9,0:8:1.25:3,1,0
chr10	45709514	.	A	AT	267.72	PASS	AB=0.945;AC=14;AF=0.250;AN=56;BaseQRankSum=8.225;DP=633;FS=1.634;HRun=0;HaplotypeScore=149.2867;InbreedingCoeff=0.4959;MQ=37.55;MQ0=48;MQRankSum=-6.898;QD=2.01;ReadPosRankSum=-1.141;VQSLOD=3.0073;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:26,1:24:6.84:7,0,18	0/0:7,0:6:11.99:0,12,144	0/0:32,0:2:6.02:0,6,83	0/0:37,0:1:3.01:0,3,41	0/0:22,0:20:18.04:0,18,223	0/0:25,0:24:38.59:0,39,409	0/0:28,0:27:39.73:0,40,447	0/0:47,0:41:53.10:0,53,1179	1/1:12,1:10:6.36:63,6,0	0/0:25,0:22:63.01:0,63,800	0/0:13,0:13:17.56:0,18,178	0/0:10,1:10:6.57:0,7,50	1/1:8,0:7:17.32:127,17,0	0/1:18,1:18:2.81:38,0,3	0/0:27,0:27:39.02:0,39,493	0/0:24,0:24:35.66:0,36,404	0/0:48,0:44:79.12:0,79,1202	0/0:23,0:22:47.92:0,48,591	0/1:11,2:12:77.29:77,0,90	0/0:13,1:14:1.94:0,2,41	0/0:60,0:42:11.79:0,12,129	0/0:14,0:12:2.38:0,2,23	0/1:10,0:9:0:0,0,0	1/1:31,0:30:3.60:21,4,0	0/0:9,0:9:5.99:0,6,64	0/0:32,0:29:81.14:0,81,1055	1/1:6,0:6:3.37:17,3,0	1/1:6,0:4:9.68:72,10,0
chr10	45709515	.	C	CG	260.33	PASS	AB=0.943;AC=17;AF=0.304;AN=56;BaseQRankSum=6.749;DP=559;FS=5.224;HRun=0;HaplotypeScore=114.9610;InbreedingCoeff=0.4649;MQ=38.15;MQ0=44;MQRankSum=-3.478;QD=1.68;ReadPosRankSum=-3.142;VQSLOD=1.5628;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:18,2:17:4.97:63,5,0	0/0:7,0:6:11.99:0,12,144	0/0:30,0:2:6.02:0,6,83	0/0:33,1:1:3.01:0,3,41	0/0:21,0:20:21.04:0,21,248	0/0:24,0:23:38.59:0,39,407	0/0:28,0:27:39.69:0,40,444	0/0:46,0:39:70.51:0,71,1099	1/1:11,0:8:3.93:58,4,0	0/0:25,0:22:63.01:0,63,800	0/0:13,0:13:17.56:0,18,178	0/0:8,1:8:0.58:0,1,1	0/1:6,0:5:13.50:17,0,14	1/1:11,2:12:7.32:44,7,0	0/0:27,0:27:39.05:0,39,498	0/0:23,0:23:32.97:0,33,399	0/0:47,0:43:82.60:0,83,1241	0/0:23,0:22:50.91:0,51,616	0/1:8,2:10:46.73:102,0,47	0/0:6,0:7:2.84:0,3,42	0/1:46,1:31:14.66:15,0,77	0/1:7,1:6:0:0,0,0	0/1:10,0:9:0:0,0,0	1/1:20,0:19:8.28:64,8,0	0/0:9,0:9:5.99:0,6,64	0/0:30,0:27:78.15:0,78,1032	1/1:4,0:5:5.38:40,5,0	1/1:3,0:1:2.68:11,3,0
chr10	45709516	.	A	AT	524.11	PASS	AB=0.742;AC=16;AF=0.286;AN=56;BaseQRankSum=7.328;DP=559;FS=0.000;HRun=0;HaplotypeScore=115.3191;InbreedingCoeff=0.5916;MQ=37.60;MQ0=42;MQRankSum=-5.729;QD=4.60;ReadPosRankSum=-1.831;VQSLOD=2.7784;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:13,7:16:0.07:0,0,1	0/0:7,0:6:14.95:0,15,164	0/0:27,0:2:6.02:0,6,83	0/0:34,0:1:3.01:0,3,41	0/0:22,0:20:18.06:0,18,240	0/0:24,0:23:38.57:0,39,392	0/0:28,0:27:36.76:0,37,428	0/0:42,0:35:51.41:0,51,997	1/1:7,5:9:8.87:110,9,0	0/0:25,0:22:63.01:0,63,800	0/0:13,0:13:17.56:0,18,178	0/0:3,5:7:0.58:0,1,1	1/1:3,3:7:0.91:75,1,0	1/1:6,7:12:12.02:155,12,0	0/0:27,0:27:39.05:0,39,494	0/0:24,0:24:32.70:0,33,400	0/0:47,0:44:66.95:0,67,1244	0/0:23,0:22:50.93:0,51,631	0/1:11,0:10:30.78:137,0,31	0/0:5,2:8:2.84:0,3,42	0/0:32,11:29:6.59:0,7,87	0/1:3,3:5:0:0,0,0	0/1:5,5:9:0:0,0,0	1/1:9,11:19:5.91:57,6,0	0/0:9,0:9:5.99:0,6,64	0/0:30,0:27:78.13:0,78,1014	1/1:2,4:6:8.86:83,9,0	1/1:4,2:2:5.98:60,6,0
chr10	45709520	.	ACACACACACACACAC	A	605.22	PASS	AB=0.935;AC=10;AF=0.179;AN=56;BaseQRankSum=6.707;DP=565;FS=2.329;HRun=0;HaplotypeScore=189.4393;InbreedingCoeff=0.2607;MQ=38.45;MQ0=38;MQRankSum=-4.284;QD=6.37;ReadPosRankSum=2.052;VQSLOD=2.9119;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:20,1:17:0.39:0,1,0	0/0:7,0:6:15.05:0,15,553	0/0:22,0:2:6.02:0,6,170	0/0:24,0:1:3.01:0,3,55	0/0:23,0:21:24.08:0,24,463	0/0:23,0:21:33.11:0,33,1041	0/0:29,0:28:40.51:0,41,976	0/0:42,0:37:91.19:0,91,2428	0/1:11,0:8:2.23:65,0,2	0/0:25,0:22:63.19:0,63,1545	0/0:13,0:13:18.42:0,18,543	0/0:8,1:8:2.19:0,2,5	0/1:10,0:9:7.66:139,0,8	0/1:15,2:16:38.40:143,0,38	0/0:29,0:29:46.54:0,47,1125	0/0:25,0:25:39.60:0,40,987	0/0:48,0:44:99:0,119,4446	0/0:22,0:22:54.18:0,54,1252	0/1:9,2:9:99:350,0,144	0/0:9,0:8:2.56:0,3,104	0/0:48,1:31:19.68:0,20,275	0/0:7,1:6:3.48:0,3,36	0/0:14,0:11:2.63:0,3,31	1/1:19,0:18:2.96:21,3,0	0/0:10,0:10:6.02:0,6,241	0/0:30,0:28:84.28:0,84,3052	0/0:8,0:7:9:0,9,82	1/1:6,0:2:2.68:11,3,0
chr10	45709550	.	GAC	G	2454.89	PASS	AB=0.838;AC=25;AF=0.463;AN=54;BaseQRankSum=8.333;DP=673;FS=3.445;HRun=0;HaplotypeScore=143.9949;InbreedingCoeff=0.8259;MQ=43.24;MQ0=35;MQRankSum=-0.962;QD=7.82;ReadPosRankSum=-1.937;VQSLOD=3.3236;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:13,21:31:12.98:193,13,0	0/0:6,0:6:9.03:0,9,144	./.	0/0:33,0:7:5.39:0,5,57	0/0:27,0:25:53.84:0,54,697	0/0:21,0:20:17.16:0,17,563	0/0:23,0:22:33.04:0,33,456	0/0:28,0:24:62.72:0,63,616	1/1:5,17:20:8.65:115,9,0	0/0:21,0:17:44.14:0,44,697	0/0:13,0:13:15.01:0,15,185	1/1:3,12:15:1.84:25,2,0	1/1:1,19:19:14.38:120,14,0	1/1:4,21:25:20.73:260,21,0	0/0:30,0:30:38.14:0,38,936	0/0:31,0:31:72.17:0,72,1146	0/0:52,0:48:99:0,131,1969	0/0:22,0:22:53.77:0,54,818	1/1:16,6:16:38.36:398,38,0	1/1:13,6:18:11.76:112,12,0	0/1:50,12:47:28.50:384,0,29	1/1:5,7:10:5.85:85,6,0	1/1:9,9:15:14.64:146,15,0	1/1:25,11:35:35.82:406,36,0	0/0:12,0:12:15:0,15,170	0/0:21,0:21:59.85:0,60,821	1/1:11,6:16:26.72:237,27,0	1/1:7,5:8:23.31:182,23,0
chr10	45709554	.	GAC	G	2579.52	PASS	AB=0.984;AC=25;AF=0.446;AN=56;BaseQRankSum=8.920;DP=681;FS=1.475;HRun=0;HaplotypeScore=137.4778;InbreedingCoeff=0.8387;MQ=44.24;MQ0=30;MQRankSum=-0.086;QD=7.91;ReadPosRankSum=-2.053;VQSLOD=3.2481;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:33,1:31:11.96:193,12,0	0/0:7,0:7:12.04:0,12,200	0/0:22,0:1:3.01:0,3,43	0/0:35,0:8:18.53:0,19,283	0/0:26,0:24:57.18:0,57,1035	0/0:21,0:20:45.04:0,45,759	0/0:21,0:20:33.07:0,33,553	0/0:26,0:23:57.65:0,58,919	1/1:25,0:23:14.64:164,15,0	0/0:20,0:17:48.13:0,48,829	0/0:12,0:12:15.05:0,15,259	1/1:16,0:16:2.31:26,2,0	1/1:23,0:22:17.39:125,17,0	1/1:25,1:26:20.73:264,21,0	0/0:27,0:27:63.13:0,63,1098	0/0:30,0:30:72.25:0,72,1365	0/0:49,0:47:99:0,135,2390	0/0:22,0:22:57.04:0,57,971	1/1:22,0:17:29.51:409,30,0	1/1:19,0:19:11.76:112,12,0	0/1:60,1:47:40.84:391,0,41	1/1:11,1:10:5.85:85,6,0	1/1:18,1:16:17.07:161,17,0	1/1:34,0:33:35.83:407,36,0	0/0:14,0:14:21.06:0,21,350	0/0:23,0:23:57.18:0,57,986	1/1:20,0:19:25.96:239,26,0	1/1:15,0:11:28.43:219,28,0
chr10	45710536	.	T	TGCGCGC	1564.87	PASS	AB=0.976;AC=26;AF=0.520;AN=50;BaseQRankSum=6.709;DP=310;FS=30.965;HRun=0;HaplotypeScore=99.0808;InbreedingCoeff=0.2712;MQ=48.55;MQ0=8;MQRankSum=-4.498;QD=10.57;ReadPosRankSum=3.512;VQSLOD=0.4602;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:5:3.01:0,3,38	0/0:13,0:13:39.13:0,39,932	0/0:39,0:21:36.53:0,37,691	0/0:38,0:19:48.16:0,48,980	1/1:8,0:9:5.62:153,6,0	1/1:4,7:11:3.01:102,3,0	1/1:3,6:13:3.01:92,3,0	0/1:18,0:15:17.74:18,0,606	0/0:11,0:11:6.02:0,6,74	1/1:1,0:4:12.04:291,12,0	1/1:4,0:4:6.02:149,6,0	./.	0/0:2,0:2:3.01:0,3,58	./.	1/1:1,0:3:3.01:82,3,0	1/1:2,0:2:3.01:75,3,0	0/0:33,0:33:75.24:0,75,1691	1/1:1,0:5:12.04:325,12,0	0/0:15,0:13:36.07:0,36,623	0/1:11,0:10:58.17:64,0,58	0/1:30,0:30:0.42:0,0,513	./.	0/0:1,0:1:3.01:0,3,34	1/1:3,0:3:2.89:35,3,0	1/1:5,0:11:6.02:163,6,0	0/1:5,0:6:63.99:64,0,174	0/1:14,0:13:93.81:94,0,102	0/1:3,0:3:19.88:20,0,116
chr10	45710548	.	T	TGCGCGC	2532.78	PASS	AB=0.946;AC=34;AF=0.654;AN=52;BaseQRankSum=4.944;DP=364;FS=38.740;HRun=0;HaplotypeScore=105.1566;InbreedingCoeff=0.3246;MQ=53.23;MQ0=7;MQRankSum=-4.204;QD=11.16;ReadPosRankSum=-1.255;VQSLOD=0.8514;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:15,0:15:23.83:101,0,24	0/0:15,0:15:39.11:0,39,816	0/0:33,0:17:45.10:0,45,858	0/0:32,0:17:50.66:0,51,979	1/1:10,0:10:8.60:130,9,0	1/1:15,0:15:5.93:83,6,0	1/1:17,0:17:12.43:172,12,0	0/1:26,0:23:99:336,0,105	0/1:11,6:21:47.84:48,0,65	1/1:11,0:10:27.03:518,27,0	1/1:3,0:3:3.01:51,3,0	1/1:9,0:9:5.99:50,6,0	0/0:3,0:3:2.92:0,3,19	./.	1/1:4,0:4:6.02:135,6,0	1/1:5,0:5:9.02:130,9,0	0/0:36,0:36:84.24:0,84,1752	1/1:7,0:7:18.06:413,18,0	0/0:10,0:8:20.98:0,21,264	0/1:10,0:9:7.10:66,0,7	0/1:32,0:32:1.69:2,0,241	./.	1/1:7,0:7:1.25:3,1,0	1/1:4,0:5:5.69:59,6,0	1/1:6,0:6:6.02:147,6,0	0/1:7,0:7:99:121,0,141	1/1:15,0:14:2.44:108,2,0	1/1:2,0:2:3:29,3,0
chr10	45710550	.	CGT	C	292.74	PASS	AB=0.963;AC=13;AF=0.250;AN=52;BaseQRankSum=2.948;DP=386;FS=3.509;HRun=0;HaplotypeScore=86.2720;InbreedingCoeff=0.4570;MQ=57.60;MQ0=6;MQRankSum=-1.705;QD=2.96;ReadPosRankSum=2.256;VQSLOD=1.3396;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:15:3.83:20,4,0	0/0:15,0:15:38.33:0,38,673	0/0:34,0:18:35.93:0,36,663	0/0:36,0:21:59.52:0,60,889	0/0:11,0:11:15.01:0,15,192	0/0:15,0:15:3.01:0,3,43	0/0:19,0:19:14.79:0,15,198	0/0:29,0:26:63.61:0,64,858	0/0:22,0:22:5.01:0,5,28	0/0:12,0:12:30.10:0,30,430	0/0:4,0:4:6.02:0,6,96	0/1:9,0:9:0:0,0,0	./.	1/1:3,0:3:2.47:24,2,0	0/0:5,0:5:3.01:0,3,39	0/0:6,0:6:12.03:0,12,169	0/0:37,0:37:91.48:0,91,1491	0/0:8,0:8:20.98:0,21,238	0/1:9,0:7:1.05:149,0,1	1/1:9,1:9:7.32:49,7,0	0/1:24,7:31:38.64:159,0,39	./.	0/0:9,0:9:2.98:0,3,22	0/1:6,0:6:0.33:1,0,0	0/0:8,0:8:12.04:0,12,179	0/0:8,0:8:20.60:0,21,202	0/1:15,0:14:1.51:2,0,4	1/1:1,0:1:2.98:21,3,0
chr10	45710552	.	T	TGTGTGC	1626.96	PASS	AB=1.000;AC=33;AF=0.589;AN=56;BaseQRankSum=5.248;DP=407;FS=24.587;HRun=0;HaplotypeScore=117.9999;InbreedingCoeff=0.2455;MQ=61.13;MQ0=4;MQRankSum=-4.001;QD=6.92;ReadPosRankSum=1.803;VQSLOD=0.5028;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:16:3.90:44,4,0	0/0:16,0:16:39:0,39,846	0/0:32,0:17:34.96:0,35,779	0/0:39,0:24:59.14:0,59,1126	0/1:11,0:11:21.24:21,0,154	1/1:15,0:15:3.01:30,3,0	0/1:18,0:18:11.37:11,0,110	0/0:29,0:26:19.93:0,20,672	1/1:23,0:23:5.38:37,5,0	0/1:13,0:13:18.99:19,0,290	0/0:4,0:4:6.02:0,6,90	1/1:10,0:10:3:25,3,0	1/1:5,0:5:5.97:46,6,0	1/1:4,0:4:5.47:49,5,0	0/1:5,0:5:11.98:19,0,12	0/0:6,0:6:14.97:0,15,180	0/0:37,0:37:93.23:0,93,1879	0/1:10,0:10:39.07:39,0,71	1/1:3,0:9:2.56:134,3,0	1/1:4,2:10:9.06:317,9,0	1/1:34,1:35:26.31:258,26,0	1/1:8,0:7:3:26,3,0	0/0:9,0:9:1.24:0,1,3	1/1:5,0:6:4.04:38,4,0	0/1:8,0:8:30.62:31,0,86	0/1:10,0:10:44.72:45,0,72	1/1:2,11:16:17.90:509,18,0	1/1:0,1:1:3.01:106,3,0
chr10	45711906	.	CACACACAGACACACAG	C	6140.26	PASS	AC=24;AF=0.444;AN=54;BaseQRankSum=4.789;DP=663;FS=20.947;HRun=0;HaplotypeScore=246.8517;InbreedingCoeff=0.9151;MQ=68.82;MQ0=23;MQRankSum=1.585;QD=24.08;ReadPosRankSum=0.766;VQSLOD=2.0590;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:41,0:40:59.12:1050,59,0	0/0:9,0:9:18.06:0,18,619	0/0:56,0:34:12.03:0,12,241	0/0:55,0:36:32.99:0,33,471	0/0:12,0:12:21.05:0,21,620	0/0:17,0:15:1.25:0,1,3	0/0:30,0:30:7.06:0,7,48	0/0:41,0:41:66.58:0,67,1396	1/1:15,0:15:12.91:241,13,0	0/0:18,0:17:48.13:0,48,1405	0/0:8,0:8:17.70:0,18,331	1/1:18,0:18:33:613,33,0	1/1:20,0:20:35.96:760,36,0	1/1:24,0:24:30.06:654,30,0	0/0:26,0:26:51.12:0,51,1289	0/0:24,0:24:54.12:0,54,1359	0/0:32,0:32:74.35:0,74,1735	0/0:18,0:18:42.07:0,42,1075	1/1:14,0:13:5.80:32,6,0	./.	1/1:41,0:36:37.61:886,38,0	1/1:10,0:10:18.01:337,18,0	1/1:9,0:8:5.99:50,6,0	1/1:38,0:37:51.07:1097,51,0	0/0:24,0:24:51.15:0,51,1417	0/0:31,0:31:78.24:0,78,2530	1/1:15,0:15:14.89:152,15,0	1/1:10,0:10:14.92:270,15,0
chr10	45711944	.	CAG	C	1087.18	PASS	AB=0.942;AC=20;AF=0.370;AN=54;BaseQRankSum=11.253;DP=543;FS=9.473;HRun=0;HaplotypeScore=101.1790;InbreedingCoeff=0.4111;MQ=43.77;MQ0=41;MQRankSum=1.814;QD=4.18;ReadPosRankSum=2.348;VQSLOD=1.6505;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:22:23.71:187,24,0	0/1:12,0:11:16.82:17,0,181	./.	0/0:24,0:4:2.98:0,3,22	0/0:8,0:7:17.68:0,18,129	1/1:16,0:13:2.48:14,2,0	0/1:39,0:37:34.38:34,0,43	0/0:30,0:28:56.62:0,57,580	0/1:13,0:13:3.11:52,0,3	0/0:23,0:19:53.95:0,54,537	0/0:11,0:10:11.97:0,12,97	1/1:19,0:18:14.10:117,14,0	1/1:10,0:10:20.97:161,21,0	0/1:17,0:17:4.65:113,0,5	0/0:25,0:25:15.56:0,16,193	0/0:20,0:20:35.66:0,36,298	0/0:25,0:25:42.03:0,42,573	0/0:20,0:19:6.60:0,7,245	0/0:9,0:7:0.83:0,1,68	0/0:10,0:7:0.47:0,0,1	1/1:47,0:40:29.54:214,30,0	1/1:9,0:9:8.60:62,9,0	0/0:7,0:4:3.01:0,3,31	0/1:35,0:33:99:161,0,102	0/0:20,0:20:32.96:0,33,275	0/0:31,0:31:79.96:0,80,737	0/1:6,7:12:27.15:27,0,51	1/1:5,0:4:11.98:106,12,0
chr10	45711946	.	G	GAC	395.23	PASS	AB=0.970;AC=32;AF=0.727;AN=44;BaseQRankSum=-0.235;DP=555;FS=0.000;HRun=0;HaplotypeScore=113.0737;InbreedingCoeff=0.2230;MQ=42.71;MQ0=45;MQRankSum=-1.488;QD=0.96;ReadPosRankSum=-3.085;VQSLOD=0.7462;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:23:0.47:1,0,0	1/1:12,0:11:1.91:25,2,0	./.	./.	./.	0/1:16,0:12:0.23:0,0,0	1/1:41,0:38:6.85:47,7,0	./.	1/1:10,3:13:6.01:70,6,0	1/1:25,0:21:3.44:21,3,0	./.	1/1:19,0:18:0.89:2,1,0	1/1:11,0:11:2.98:21,3,0	1/1:18,0:18:5.52:48,6,0	0/1:20,0:20:3.25:26,0,3	0/1:20,0:20:0:0,0,0	0/1:25,0:25:0.41:0,0,141	1/1:19,0:18:6.43:47,6,0	1/1:13,0:11:6.02:29,6,0	0/1:11,0:8:0:0,0,0	1/1:49,0:41:3.01:43,3,0	0/1:13,0:12:0:0,0,0	1/1:6,2:5:3.01:43,3,0	0/1:24,10:32:43.69:74,0,44	0/1:19,0:19:0:0,0,0	./.	0/0:15,0:14:3.87:0,4,14	0/0:5,0:5:1.83:0,2,12
chr10	45711992	.	CACACACACACAT	C	1049.54	PASS	AB=1.000;AC=14;AF=0.250;AN=56;BaseQRankSum=2.613;DP=643;FS=1.805;HRun=0;HaplotypeScore=159.9737;InbreedingCoeff=0.7306;MQ=45.42;MQ0=45;MQRankSum=1.186;QD=6.77;ReadPosRankSum=-0.872;VQSLOD=2.7247;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:27:51.18:0,51,509	0/0:16,0:15:15.72:0,16,233	0/0:29,0:7:14.12:0,14,138	0/0:36,0:10:16.61:0,17,154	1/1:12,0:10:14.95:118,15,0	0/1:16,0:13:0:0,0,1	0/1:39,0:35:48.12:204,0,48	0/0:25,0:23:56.73:0,57,435	0/0:14,0:13:24.01:0,24,316	1/1:21,0:19:8.53:161,9,0	1/1:9,0:8:2.37:23,2,0	0/0:24,0:22:25.16:0,25,239	0/0:15,0:13:22.93:0,23,222	0/0:26,0:26:39.60:0,40,499	1/1:19,1:20:29.15:251,29,0	0/0:4,16:20:0.47:0,0,2	0/0:23,0:22:51.88:0,52,1022	1/1:20,0:18:3.04:175,3,0	0/0:12,0:11:25.55:0,26,208	0/0:16,0:14:14.97:0,15,174	0/0:73,0:60:95.57:0,96,888	0/0:15,0:14:12.11:0,12,198	0/0:8,0:6:8.95:0,9,125	0/0:35,0:31:41.93:0,42,635	1/1:18,0:18:32.63:285,33,0	0/0:34,0:32:28.43:0,28,454	0/0:23,0:23:43.59:0,44,421	0/0:14,0:12:30.57:0,31,758
chr10	45712004	.	T	TAC	911.30	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=2.425;DP=659;FS=0.000;HRun=0;HaplotypeScore=98.8438;InbreedingCoeff=0.7175;MQ=58.59;MQ0=28;MQRankSum=-1.514;QD=5.73;ReadPosRankSum=-2.619;VQSLOD=2.4570;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:30:66.21:0,66,833	0/0:16,0:15:29.81:0,30,321	0/0:44,0:16:39.95:0,40,441	0/0:47,0:19:39.30:0,39,439	1/1:14,0:13:0.59:21,1,0	1/1:5,11:15:0.47:1,0,0	1/1:33,0:32:42.43:840,42,0	0/0:29,0:28:69.22:0,69,878	0/0:13,0:12:18.43:0,18,266	0/1:19,0:19:0.63:1,0,1	1/1:7,0:6:5.98:48,6,0	0/0:23,0:22:35.84:0,36,483	0/0:18,0:16:38.95:0,39,426	0/0:29,0:29:37.17:0,37,619	0/1:20,0:20:2.92:27,0,3	0/1:16,0:16:0.07:0,0,0	0/0:24,0:24:48.91:0,49,601	1/1:19,0:18:19.67:117,20,0	0/0:15,0:14:35.13:0,35,408	0/0:15,0:14:18.04:0,18,210	0/0:69,0:63:99:0,114,1355	0/0:16,0:15:17.88:0,18,203	0/0:9,0:8:14.07:0,14,152	0/0:33,0:31:46.69:0,47,605	1/1:14,0:14:0.47:1,0,0	0/0:31,0:29:60.66:0,61,762	0/0:22,0:22:46.83:0,47,504	0/0:15,0:14:38.99:0,39,422
chr10	45717539	.	TA	T	5800.52	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=12.828;DP=628;FS=15.022;HRun=3;HaplotypeScore=60.8708;InbreedingCoeff=0.9928;MQ=84.98;MQ0=0;MQRankSum=-2.023;QD=34.73;ReadPosRankSum=2.643;VQSLOD=3.9307;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:81.27:0,81,1166	0/0:12,0:12:36.12:0,36,519	0/0:26,0:26:69.23:0,69,989	0/0:13,0:13:36.12:0,36,505	1/1:1,31:32:87.27:1079,87,0	0/0:36,0:35:99:0,108,1535	0/0:13,0:13:33.11:0,33,475	0/0:38,0:38:99:0,108,1555	0/0:15,1:16:10.94:0,11,586	1/1:0,31:31:93.29:1153,93,0	1/1:1,24:25:69.22:854,69,0	0/0:24,0:24:72.23:0,72,1017	0/0:24,0:24:69.22:0,69,975	0/0:17,0:17:51.17:0,51,734	1/1:0,20:20:60.19:744,60,0	1/1:0,19:19:54.17:670,54,0	0/0:23,0:23:66.21:0,66,932	1/1:0,23:23:63.20:781,63,0	0/0:20,0:20:57.17:0,57,785	0/0:16,0:16:45.15:0,45,647	0/0:20,0:20:60.20:0,60,862	0/0:22,0:22:63.21:0,63,907	0/0:16,0:16:48.16:0,48,691	0/0:26,0:26:75.23:0,75,1057	1/1:2,15:17:42.13:521,42,0	0/0:23,0:23:63.21:0,63,907	0/0:28,0:28:84.27:0,84,1187	0/0:20,0:20:60.20:0,60,864
chr10	45722570	.	AAAAT	A	1029.07	PASS	AB=1.000;AC=33;AF=0.786;AN=42;BaseQRankSum=0.224;DP=253;FS=8.690;HRun=0;HaplotypeScore=53.1880;InbreedingCoeff=0.1378;MQ=69.51;MQ0=0;MQRankSum=-2.241;QD=5.15;ReadPosRankSum=-3.675;VQSLOD=-0.7557;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:8:0.89:0,1,2	0/0:3,0:4:3.01:0,3,52	./.	./.	./.	1/1:4,0:7:5.91:44,6,0	./.	1/1:39,0:39:2.97:20,3,0	0/0:3,0:3:2.60:0,3,10	1/1:8,0:8:5.97:48,6,0	1/1:9,0:9:12.01:112,12,0	0/1:5,0:5:18.03:18,0,23	1/1:9,0:9:2.74:12,3,0	0/1:5,0:5:3.62:19,0,4	1/1:4,0:4:8.96:75,9,0	1/1:10,0:10:6.01:56,6,0	1/1:9,10:19:18.06:277,18,0	1/1:19,0:19:15.02:139,15,0	1/1:14,0:14:5.99:48,6,0	1/1:8,0:8:2.99:24,3,0	./.	./.	1/1:7,0:7:2.99:24,3,0	./.	1/1:6,0:6:6.01:56,6,0	1/1:7,1:8:6.02:92,6,0	1/1:7,0:7:5.49:33,5,0	0/1:16,0:16:45.90:46,0,88
chr10	45722602	.	TA	T	782.69	PASS	AB=0.739;AC=17;AF=0.340;AN=50;BaseQRankSum=2.772;DP=186;FS=13.387;HRun=3;HaplotypeScore=42.6810;InbreedingCoeff=0.1859;MQ=52.80;MQ0=4;MQRankSum=-3.031;QD=13.27;ReadPosRankSum=1.284;VQSLOD=1.0594;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:5,2:7:9.22:36,0,9	0/0:3,0:3:9.02:0,9,106	0/0:4,0:2:0.57:0,1,37	0/0:12,0:6:1.97:0,2,61	0/0:3,0:3:9.03:0,9,122	0/1:6,0:6:10.17:10,0,108	1/1:1,0:1:2.99:24,3,0	0/0:28,0:28:84.27:0,84,1127	1/1:0,1:1:3.01:37,3,0	0/0:3,0:3:8.98:0,9,91	0/0:5,0:5:14.87:0,15,107	0/1:3,2:5:31.70:58,0,32	1/1:0,2:2:6.02:74,6,0	1/1:1,2:3:5.95:72,6,0	0/0:5,0:5:8.94:0,9,70	0/0:3,0:3:5.93:0,6,40	0/0:22,0:22:35.41:0,35,415	0/0:24,0:24:20.86:0,21,184	0/1:2,2:4:31.58:61,0,32	0/1:1,2:3:2.56:63,0,3	./.	./.	1/1:0,1:1:3.01:35,3,0	./.	0/0:10,0:10:5.93:0,6,40	0/0:4,0:4:4.45:0,4,79	0/1:3,2:5:28.31:41,0,28	0/1:12,9:21:1.78:419,0,2
chr10	45722610	.	TAAATA	T	1631.94	PASS	AB=0.787;AC=27;AF=0.540;AN=50;BaseQRankSum=2.942;DP=189;FS=2.340;HRun=0;HaplotypeScore=57.4784;InbreedingCoeff=0.2497;MQ=59.01;MQ0=4;MQRankSum=-1.723;QD=14.19;ReadPosRankSum=5.406;VQSLOD=2.2443;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:3,0:6:7.24:0,7,22	0/0:3,0:3:9.03:0,9,157	0/0:5,0:3:8.06:0,8,87	0/0:12,0:6:9.87:0,10,90	1/1:6,0:6:18.06:219,18,0	0/1:8,0:8:21.47:21,0,178	./.	0/0:25,0:25:66.13:0,66,814	0/0:1,0:1:2.22:0,2,7	1/1:0,4:4:12.02:182,12,0	1/1:0,6:6:18.06:332,18,0	0/1:3,0:5:16.14:16,0,56	1/1:2,0:2:2.83:14,3,0	0/1:2,0:3:4.87:19,0,5	1/1:0,5:5:9.03:186,9,0	1/1:0,3:3:6.02:130,6,0	0/0:20,0:20:19.51:0,20,409	1/1:2,24:26:18.04:349,18,0	1/1:3,0:4:7.33:56,7,0	0/1:2,0:3:18.40:18,0,26	./.	./.	1/1:1,0:1:3:26,3,0	0/0:1,0:1:1.55:0,2,4	1/1:0,10:10:6.02:130,6,0	0/1:6,0:6:28.65:29,0,105	0/1:2,0:5:15.92:26,0,16	0/1:9,0:18:45.34:45,0,127
chr10	45722611	.	AAATAAAT	A	2011.01	PASS	AB=0.917;AC=30;AF=0.600;AN=50;BaseQRankSum=5.517;DP=193;FS=5.413;HRun=0;HaplotypeScore=64.9555;InbreedingCoeff=0.4147;MQ=59.16;MQ0=4;MQRankSum=-6.305;QD=18.45;ReadPosRankSum=2.563;VQSLOD=1.5189;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,0:6:15.01:175,15,0	0/0:3,0:3:9.03:0,9,173	0/0:6,0:3:8.24:0,8,79	0/0:12,0:6:10.66:0,11,122	0/0:6,0:6:17.86:0,18,126	0/1:8,0:8:43.39:43,0,164	./.	0/0:26,0:26:57.18:0,57,734	1/1:1,0:1:3.01:39,3,0	0/0:4,0:4:1.47:0,1,46	0/1:6,0:6:14.12:14,0,23	1/1:4,1:5:12.01:171,12,0	1/1:1,0:1:3.01:60,3,0	1/1:2,1:3:9.03:145,9,0	1/1:5,0:5:3.74:13,4,0	1/1:3,0:3:4.44:14,4,0	0/0:20,0:20:47.87:0,48,505	0/1:25,0:25:11.72:22,0,12	0/1:2,2:4:19.12:172,0,19	1/1:2,1:3:6.02:106,6,0	./.	./.	1/1:0,1:1:3.01:72,3,0	1/1:0,1:1:3.01:42,3,0	1/1:10,0:10:4.44:14,4,0	0/0:7,0:7:20.94:0,21,209	1/1:3,2:5:15:219,15,0	1/1:19,3:22:60.18:860,60,0
chr10	45722614	.	TA	T	582.17	PASS	AB=0.958;AC=23;AF=0.460;AN=50;BaseQRankSum=3.595;DP=195;FS=5.925;HRun=3;HaplotypeScore=51.4367;InbreedingCoeff=0.5911;MQ=59.45;MQ0=4;MQRankSum=-2.794;QD=7.46;ReadPosRankSum=3.604;VQSLOD=0.8988;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:6:7.16:0,7,17	0/0:4,0:4:9.02:0,9,105	0/0:6,0:3:8.06:0,8,87	0/0:12,0:6:10.84:0,11,97	1/1:0,6:6:18.06:219,18,0	0/0:9,0:9:18.12:0,18,209	./.	0/0:25,0:25:55.31:0,55,898	0/0:1,0:1:2.80:0,3,13	1/1:4,0:4:11.62:89,12,0	1/1:6,0:6:17.79:145,18,0	0/0:5,0:5:5.30:0,5,46	1/1:1,0:1:1.55:4,2,0	0/1:3,0:3:0.58:3,0,1	1/1:5,0:5:8.85:56,9,0	1/1:3,0:3:5.88:37,6,0	0/0:21,0:21:33.11:0,33,436	1/1:25,0:25:17.70:115,18,0	1/1:4,0:4:3.64:11,4,0	0/1:3,0:3:0.83:1,0,2	./.	./.	1/1:1,0:1:1.55:4,2,0	0/0:1,0:1:1.55:0,2,4	1/1:10,0:10:5.88:37,6,0	0/1:6,1:7:25.89:26,0,142	0/0:5,0:5:4.99:0,5,28	0/0:22,0:22:14.47:0,14,98
chr10	45722618	.	T	TA	1155.66	PASS	AB=0.875;AC=17;AF=0.340;AN=50;BaseQRankSum=3.888;DP=199;FS=0.679;HRun=3;HaplotypeScore=50.2838;InbreedingCoeff=0.6676;MQ=59.56;MQ0=4;MQRankSum=-5.902;QD=22.66;ReadPosRankSum=1.311;VQSLOD=2.9983;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,4:5:15.05:191,15,0	0/0:4,0:4:6.92:0,7,107	0/0:6,0:3:7.84:0,8,77	0/0:12,0:6:11.40:0,11,118	0/0:7,0:7:20.87:0,21,161	0/0:9,0:9:4.37:0,4,220	./.	0/0:25,0:25:75.24:0,75,928	0/0:0,0:1:2.04:0,2,6	0/0:4,0:4:8.98:0,9,80	0/0:6,0:6:17.89:0,18,140	1/1:2,2:4:11.90:113,12,0	0/0:0,0:1:2.04:0,2,6	1/1:2,1:4:5.06:71,5,0	0/0:5,0:5:6.46:0,6,50	0/0:4,0:4:9:0,9,76	0/0:20,1:21:45.70:0,46,481	0/0:26,0:26:21.02:0,21,198	0/1:6,1:7:5.49:115,0,5	1/1:3,1:4:8.92:92,9,0	./.	./.	1/1:1,0:1:2.90:16,3,0	1/1:1,0:1:3.01:42,3,0	0/0:10,0:10:6:0,6,52	0/0:7,0:7:20.96:0,21,213	1/1:2,3:5:14.90:143,15,0	1/1:4,13:20:44.66:543,45,0
chr10	45726511	.	AGTATGTATGTAT	A	11767.95	PASS	AC=24;AF=0.444;AN=54;BaseQRankSum=12.636;DP=794;FS=6.957;HRun=0;HaplotypeScore=267.5059;InbreedingCoeff=0.9609;MQ=59.94;MQ0=4;MQRankSum=-13.372;QD=34.71;ReadPosRankSum=2.145;VQSLOD=3.2204;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,28:38:14.96:355,15,0	0/0:4,0:9:9.90:0,10,306	0/0:22,0:18:25.64:0,26,815	0/0:26,0:24:33.11:0,33,720	0/0:43,0:44:84.29:0,84,4177	0/0:5,0:25:33.11:0,33,1270	0/0:20,0:25:39.09:0,39,1235	0/0:49,0:50:84.29:0,84,3837	1/1:6,21:27:30.03:882,30,0	0/0:39,0:39:96.33:0,96,4719	0/0:30,0:30:75.26:0,75,3708	1/1:6,20:26:30.10:1052,30,0	1/1:2,17:19:27.09:946,27,0	1/1:9,27:35:51.18:1788,51,0	0/0:38,0:37:87.30:0,87,4692	0/0:31,0:31:63.22:0,63,3433	0/0:27,0:29:44.68:0,45,3025	0/0:30,0:30:75.21:0,75,3623	1/1:12,14:26:42.12:1104,42,0	1/1:11,15:26:27.06:815,27,0	1/1:10,11:20:3.01:59,3,0	1/1:2,29:31:41.97:1131,42,0	1/1:7,23:29:41.95:1217,42,0	1/1:5,11:16:12.51:421,13,0	0/0:30,0:32:69.24:0,69,3400	0/0:25,0:25:57.20:0,57,2792	1/1:8,35:43:56.56:1997,57,0	./.
chr10	45730858	.	GGAGGT	G	17067.25	PASS	AB=0.935;AC=45;AF=0.804;AN=56;BaseQRankSum=7.406;DP=754;FS=1.197;HRun=0;HaplotypeScore=178.2019;InbreedingCoeff=0.8765;MQ=81.99;MQ0=3;MQRankSum=-6.859;QD=29.89;ReadPosRankSum=6.357;VQSLOD=4.6595;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,30:41:71.77:1360,72,0	0/0:13,0:13:24.08:0,24,636	0/0:37,0:31:42.10:0,42,832	0/0:49,0:43:83.18:0,83,1368	1/1:5,14:19:23.52:331,24,0	1/1:5,15:20:33.11:624,33,0	1/1:11,23:34:39:659,39,0	0/0:36,0:36:63.20:0,63,1633	1/1:3,16:19:36.12:681,36,0	1/1:5,22:27:59.86:1065,60,0	1/1:7,13:20:30.06:530,30,0	1/1:7,21:28:54.19:1021,54,0	1/1:11,22:33:69.24:1305,69,0	1/1:6,15:21:39.09:700,39,0	1/1:5,18:23:42.14:794,42,0	1/1:5,22:27:53.97:1020,54,0	0/0:48,0:48:99:0,114,3281	1/1:6,24:30:45.15:851,45,0	1/1:4,15:19:39.10:634,39,0	1/1:2,15:17:30.03:514,30,0	1/1:12,26:38:59.96:1098,60,0	1/1:8,26:34:60.01:985,60,0	1/1:2,11:13:15.05:284,15,0	1/1:4,22:26:47.95:907,48,0	1/1:1,19:20:42.14:773,42,0	0/1:27,2:29:26.49:26,0,1834	1/1:3,21:24:35:679,35,0	1/1:5,4:9:12.04:227,12,0
chr10	45730864	.	GAGGT	G	4077.84	PASS	AB=0.990;AC=24;AF=0.429;AN=56;BaseQRankSum=14.497;DP=725;FS=6.029;HRun=0;HaplotypeScore=203.2403;InbreedingCoeff=-0.4602;MQ=81.89;MQ0=3;MQRankSum=-7.065;QD=8.03;ReadPosRankSum=14.011;VQSLOD=-0.5703;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:37,1:38:99:331,0,237	0/0:15,0:15:45.15:0,45,961	0/0:37,0:31:87.12:0,87,1525	0/0:54,0:48:99:0,126,2280	0/1:18,0:18:56.21:56,0,152	0/1:19,0:19:97.29:151,0,97	0/1:28,0:28:99:150,0,144	0/0:36,0:36:99:0,103,2368	0/1:19,0:19:72.51:169,0,73	0/1:24,0:24:99:233,0,102	0/1:17,0:17:97.19:122,0,97	0/1:26,0:26:18.91:263,0,19	0/1:31,2:33:99:331,0,112	0/1:18,1:19:88.26:168,0,88	0/1:22,0:22:86.14:196,0,86	0/1:25,0:25:55.07:258,0,55	0/0:45,0:45:99:0,135,3575	0/1:28,0:27:93.54:211,0,94	0/1:17,0:17:88.93:114,0,89	0/1:17,0:17:99:105,0,125	0/1:39,0:39:99:246,0,348	0/1:30,2:32:99:208,0,228	1/1:11,0:11:14.54:89,15,0	0/1:27,0:27:96.73:226,0,97	1/1:19,0:19:36.24:229,36,0	0/0:30,0:30:59.84:0,60,2180	0/1:24,0:24:73.84:167,0,74	0/1:6,0:6:53.52:54,0,59
chr10	45730869	.	GAGGT	G	4133.15	PASS	AB=0.992;AC=25;AF=0.446;AN=56;BaseQRankSum=14.546;DP=726;FS=7.240;HRun=0;HaplotypeScore=202.7379;InbreedingCoeff=-0.3805;MQ=84.41;MQ0=3;MQRankSum=-6.521;QD=8.28;ReadPosRankSum=15.770;VQSLOD=-0.7246;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:38,0:38:99:335,0,233	0/0:14,0:14:42.14:0,42,925	0/0:41,0:35:97.24:0,97,1662	0/0:55,0:49:99:0,131,2406	0/1:17,1:18:56.21:56,0,153	0/1:17,0:17:39.20:157,0,39	0/1:25,0:25:75.19:152,0,75	0/0:38,0:38:99:0,109,2446	0/1:18,0:18:35.08:172,0,35	0/1:23,0:23:66.59:237,0,67	0/1:17,0:17:91.42:122,0,91	0/1:26,2:28:90.71:271,0,91	0/1:30,1:31:76.08:332,0,76	0/1:19,0:19:86.83:166,0,87	0/1:25,0:25:99:187,0,210	1/1:22,0:22:52.73:319,53,0	0/0:47,0:47:99:0,138,3606	1/1:26,0:25:11.84:231,12,0	0/1:17,0:17:99:114,0,103	0/1:16,0:16:99:108,0,100	0/1:37,0:37:99:252,0,267	0/1:35,0:35:99:198,0,341	1/1:11,0:11:14.54:89,15,0	0/1:27,0:27:99:223,0,124	0/1:21,0:21:35.69:185,0,36	0/0:32,0:32:65.86:0,66,2249	0/1:23,0:23:54.61:169,0,55	0/1:5,0:5:24.15:56,0,24
chr10	45736094	.	ACACACACACACAC	A	12032.40	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=8.533;DP=563;FS=1.454;HRun=0;HaplotypeScore=188.4282;InbreedingCoeff=0.9421;MQ=55.73;MQ0=29;MQRankSum=-10.718;QD=58.98;ReadPosRankSum=8.218;VQSLOD=4.1035;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,18:18:21.07:879,21,0	0/0:4,0:4:9.03:0,9,554	0/0:40,0:19:53.20:0,53,1118	0/0:46,0:25:66.60:0,67,1388	0/0:19,0:19:44.18:0,44,1509	0/0:26,0:25:32.90:0,33,1092	0/0:29,0:28:34.41:0,34,1277	0/0:22,0:22:66.22:0,66,2178	1/1:0,14:14:26.91:1129,27,0	0/0:18,0:18:51.17:0,51,2433	0/0:18,0:17:39.13:0,39,1389	1/1:0,19:21:51.18:2090,51,0	1/1:1,12:14:27.09:1103,27,0	1/1:0,16:15:22.56:1002,23,0	0/0:21,0:21:30.10:0,30,1214	0/0:20,0:20:27.09:0,27,992	0/0:23,0:23:60.16:0,60,2958	0/0:29,0:29:78.26:0,78,3602	1/1:0,0:6:15.51:187,16,0	1/1:0,11:12:33.06:1174,33,0	1/1:1,7:8:3.01:126,3,0	1/1:1,8:10:10.28:358,10,0	1/1:1,13:14:30.10:1233,30,0	1/1:1,23:24:18.06:731,18,0	0/0:17,0:17:21.07:0,21,1094	0/0:27,0:26:78.26:0,78,3444	1/1:1,22:27:45.15:1770,45,0	1/1:0,2:2:6.02:251,6,0
chr10	45736100	.	AC	A	657.08	PASS	AB=0.765;AC=25;AF=0.446;AN=56;BaseQRankSum=13.951;DP=569;FS=0.000;HRun=1;HaplotypeScore=143.3248;InbreedingCoeff=0.8595;MQ=53.71;MQ0=33;MQRankSum=-11.447;QD=3.04;ReadPosRankSum=7.497;VQSLOD=-0.4532;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:22:19.30:89,19,0	0/0:4,0:4:9.01:0,9,87	0/0:38,0:16:45.13:0,45,570	0/0:45,0:22:53.44:0,53,678	0/0:20,0:20:44.71:0,45,512	0/0:24,0:23:26.75:0,27,361	0/0:26,0:25:25.10:0,25,350	0/0:20,0:20:60.20:0,60,816	1/1:16,0:14:20.05:65,20,0	0/0:20,0:20:57.16:0,57,755	0/0:18,0:17:39.10:0,39,503	1/1:21,0:21:38.12:123,38,0	1/1:15,0:14:20.51:68,21,0	1/1:17,0:16:21.23:81,21,0	0/0:21,0:21:30.08:0,30,364	0/0:19,0:19:24.06:0,24,287	0/0:26,0:26:64.25:0,64,856	0/0:29,0:29:78.22:0,78,965	0/1:9,4:9:74.87:75,0,113	1/1:13,0:12:23.28:84,23,0	1/1:11,0:8:2.22:7,2,0	1/1:10,0:10:7.91:24,8,0	1/1:17,1:15:22.66:74,23,0	1/1:29,0:24:14.86:57,15,0	0/0:17,0:17:21.05:0,21,230	0/0:26,0:25:75.25:0,75,1100	1/1:27,0:27:33.68:109,34,0	1/1:2,0:2:4.82:17,5,0
chr10	45736102	.	AC	A	712.79	PASS	AB=1.000;AC=25;AF=0.446;AN=56;BaseQRankSum=14.185;DP=571;FS=0.000;HRun=1;HaplotypeScore=142.5585;InbreedingCoeff=0.8627;MQ=52.56;MQ0=33;MQRankSum=-10.588;QD=3.30;ReadPosRankSum=7.796;VQSLOD=-0.4495;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:21,3:22:19.31:102,19,0	0/0:5,0:5:12.01:0,12,112	0/0:38,0:15:42.13:0,42,550	0/0:44,0:21:47.38:0,47,613	0/0:17,0:17:38.69:0,39,437	0/0:25,0:24:32.75:0,33,422	0/0:26,0:25:25.08:0,25,350	0/0:20,0:20:60.20:0,60,816	1/1:16,0:14:21.18:84,21,0	0/0:23,0:23:66.17:0,66,845	0/0:17,0:16:36.11:0,36,478	1/1:21,0:21:38.17:123,38,0	1/1:15,0:14:20.36:67,20,0	1/1:16,1:16:20.44:94,20,0	0/0:21,0:21:30.08:0,30,364	0/0:19,0:19:24.06:0,24,287	0/0:26,0:26:64.25:0,64,845	0/0:28,0:28:75.21:0,75,928	0/1:13,0:9:73.70:74,0,95	1/1:13,0:12:23.71:85,24,0	1/1:12,0:8:2.22:7,2,0	1/1:10,0:10:7.91:24,8,0	1/1:18,0:15:22.58:73,23,0	1/1:28,0:24:14.76:54,15,0	0/0:18,0:18:21.05:0,21,230	0/0:28,0:27:81.26:0,81,1167	1/1:27,0:27:34.09:129,34,0	1/1:2,0:2:4.59:15,5,0
chr10	45736106	.	AC	A	1293.60	PASS	AB=0.750;AC=25;AF=0.446;AN=56;BaseQRankSum=14.352;DP=578;FS=1.413;HRun=1;HaplotypeScore=139.8921;InbreedingCoeff=0.8729;MQ=50.91;MQ0=31;MQRankSum=-10.993;QD=6.04;ReadPosRankSum=8.269;VQSLOD=0.2547;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:22:22.91:126,23,0	0/0:6,0:6:15.03:0,15,162	0/0:35,0:15:45.12:0,45,576	0/0:40,1:19:44.52:0,45,608	0/0:18,0:18:41.69:0,42,459	0/0:25,0:24:32.77:0,33,436	0/0:28,0:27:31.05:0,31,424	0/0:23,0:23:69.22:0,69,927	1/1:16,0:14:25.63:140,26,0	0/0:24,0:24:69.20:0,69,896	0/0:17,0:16:36.10:0,36,465	1/1:21,0:21:47.15:232,47,0	1/1:15,0:14:24.99:126,25,0	1/1:17,0:16:25.25:128,25,0	0/0:23,0:23:33.08:0,33,387	0/0:22,0:22:33.08:0,33,386	0/0:26,0:26:64.24:0,64,844	0/0:28,0:28:75.13:0,75,893	0/1:8,4:10:92.88:109,0,93	1/1:13,0:12:16.71:142,17,0	1/1:12,0:8:2.84:15,3,0	1/1:10,0:10:9.15:38,9,0	1/1:18,0:15:27.88:139,28,0	1/1:27,0:24:16.69:91,17,0	0/0:19,0:19:24.06:0,24,267	0/0:29,0:28:84.27:0,84,1214	1/1:27,0:27:39.78:196,40,0	1/1:2,0:2:5.74:30,6,0
chr10	45739365	.	CTGTG	C	7028	PASS	AB=0.976;AC=23;AF=0.411;AN=56;BaseQRankSum=-2.179;DP=775;FS=4.044;HRun=0;HaplotypeScore=169.4392;InbreedingCoeff=0.8185;MQ=67.28;MQ0=10;MQRankSum=2.422;QD=21.36;ReadPosRankSum=3.804;VQSLOD=4.7879;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:36:8.99:0,9,114	0/0:11,0:11:15.05:0,15,364	0/0:55,0:26:13.58:0,14,195	0/0:55,0:35:8.12:0,8,564	1/1:8,14:22:17.48:406,17,0	1/1:7,13:22:42.12:619,42,0	1/1:7,12:22:26.13:496,26,0	1/1:21,15:36:7.65:515,8,0	0/0:25,0:24:20.44:0,20,259	1/1:9,18:28:54.03:769,54,0	1/1:5,6:11:12.04:195,12,0	0/0:32,0:31:18.06:0,18,357	0/0:24,0:24:8.91:0,9,65	0/0:34,0:34:11.69:0,12,191	1/1:5,25:33:63.19:962,63,0	1/1:11,24:35:60.20:976,60,0	0/0:18,0:22:50.36:0,50,996	1/1:12,16:28:16.76:602,17,0	0/0:24,0:21:34.31:0,34,608	0/0:19,0:18:9.03:0,9,173	0/0:27,0:24:18.03:0,18,295	0/0:24,0:23:12.01:0,12,176	0/0:16,0:15:2.91:0,3,24	0/1:40,1:41:30.35:30,0,293	1/1:3,16:20:42.14:662,42,0	1/1:11,18:30:43.37:795,43,0	0/0:31,0:29:39.01:0,39,588	0/0:8,0:8:6:0,6,80
chr10	45741197	.	TC	T	10773.49	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=13.362;DP=674;FS=5.213;HRun=2;HaplotypeScore=69.3341;InbreedingCoeff=0.9760;MQ=91.22;MQ0=0;MQRankSum=-2.627;QD=36.52;ReadPosRankSum=3.893;VQSLOD=5.5317;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,39:39:99:1441,111,0	0/0:12,0:12:36.12:0,36,540	0/0:36,0:36:99:0,99,1423	0/0:25,0:25:72.21:0,72,1030	0/0:31,0:31:90.30:0,90,1349	0/0:21,0:21:63.21:0,63,943	0/0:24,0:24:69.23:0,69,1029	0/0:33,0:33:96.31:0,96,1415	1/1:0,29:29:84.27:1091,84,0	0/0:27,0:27:81.27:0,81,1197	0/0:18,0:18:54.18:0,54,809	1/1:0,17:17:45.15:584,45,0	1/1:0,22:22:66.21:857,66,0	1/1:1,22:23:60.19:779,60,0	0/0:30,0:30:90.30:0,90,1349	0/0:24,0:24:72.24:0,72,1079	0/0:40,0:40:99:0,117,1715	0/0:23,0:23:66.19:0,66,947	1/1:1,16:17:48.15:608,48,0	1/1:0,33:33:93.30:1207,93,0	1/1:0,16:16:39.13:506,39,0	1/1:0,28:28:81.26:1052,81,0	1/1:0,16:16:48.16:623,48,0	1/1:0,30:30:87.28:1130,87,0	0/0:13,0:13:36.12:0,36,540	0/0:22,0:22:63.21:0,63,944	1/1:0,24:24:66.21:857,66,0	1/1:0,1:1:3.01:39,3,0
chr10	45741764	.	C	CGATA	3735.70	PASS	AB=0.741;AC=29;AF=0.630;AN=46;BaseQRankSum=2.268;DP=532;FS=0.665;HRun=0;HaplotypeScore=106.8560;InbreedingCoeff=0.7743;MQ=71.63;MQ0=4;MQRankSum=-3.318;QD=12.84;ReadPosRankSum=-2.814;VQSLOD=2.8999;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:30:7.76:142,8,0	1/1:11,0:11:8.98:120,9,0	./.	./.	0/1:13,7:20:21.16:427,0,21	0/0:15,0:16:12.03:0,12,162	./.	./.	1/1:20,0:20:12.04:209,12,0	0/0:25,0:25:33.10:0,33,466	0/0:12,0:12:21.06:0,21,296	1/1:11,0:11:15.05:274,15,0	1/1:15,0:15:12.04:219,12,0	1/1:19,0:19:12.04:219,12,0	1/1:7,7:16:15.05:347,15,0	1/1:6,6:12:9.03:208,9,0	1/1:23,0:27:6.02:99,6,0	0/0:22,0:22:27.84:0,28,464	0/0:24,0:24:9.03:0,9,136	0/0:23,0:23:18.06:0,18,271	0/0:20,0:20:9.03:0,9,136	1/1:8,0:8:9.03:136,9,0	1/1:23,0:22:14.08:227,14,0	1/1:20,0:20:5.81:67,6,0	1/1:13,19:32:30.10:685,30,0	1/1:19,0:27:23.29:357,23,0	0/0:23,0:23:32.65:0,33,488	./.
chr10	45741819	.	T	TAGATAGATAGAA	5252.86	PASS	AB=1.000;AC=25;AF=0.446;AN=56;BaseQRankSum=3.343;DP=597;FS=0.795;HRun=0;HaplotypeScore=179.6336;InbreedingCoeff=0.4351;MQ=62.50;MQ0=3;MQRankSum=-2.807;QD=16.68;ReadPosRankSum=-3.298;VQSLOD=3.4696;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:1,28:37:9.03:516,9,0	0/1:11,0:11:99:361,0,139	0/0:15,0:11:26:0,26,289	0/0:13,0:11:5.73:0,6,147	0/0:32,0:32:59.43:0,59,670	0/0:24,0:24:56.99:0,57,715	0/0:10,0:10:26.97:0,27,225	0/0:39,0:35:88.46:0,88,806	1/1:21,0:21:62.94:678,63,0	0/0:29,0:29:83.09:0,83,1554	0/0:18,0:18:45.03:0,45,841	1/1:1,0:16:15.05:422,15,0	1/1:1,0:16:14.92:362,15,0	1/1:0,0:18:11.81:347,12,0	0/0:19,0:19:44.34:0,44,326	0/0:18,0:18:41.59:0,42,321	0/1:18,0:18:43.64:44,0,174	0/0:30,0:30:89.54:0,90,1415	0/1:23,0:23:99:433,0,126	0/1:22,0:22:99:304,0,385	0/1:11,0:11:99:110,0,174	1/1:2,0:19:41.62:413,42,0	1/1:2,0:23:21.65:399,22,0	1/1:0,0:17:3.01:87,3,0	0/0:35,0:34:64.84:0,65,467	0/1:28,0:28:99:296,0,422	0/1:27,0:27:99:273,0,692	1/1:8,0:8:24:210,24,0
chr10	45742089	.	T	TG	15359.07	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=21.546;DP=810;FS=0.818;HRun=1;HaplotypeScore=101.4305;InbreedingCoeff=0.9997;MQ=84.82;MQ0=0;MQRankSum=-2.826;QD=40.96;ReadPosRankSum=5.079;VQSLOD=4.6632;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,44:44:99:1929,129,0	0/0:8,0:8:24.06:0,24,304	0/0:32,0:32:93.25:0,93,1190	0/0:20,0:20:57.15:0,57,754	0/0:39,0:39:99:0,114,1523	0/0:24,0:24:72.21:0,72,969	0/0:15,0:15:45.15:0,45,629	0/0:47,0:47:99:0,135,1840	1/1:0,25:25:69.23:1027,69,0	0/0:27,0:27:81.25:0,81,1103	0/0:20,0:20:57.19:0,57,797	1/1:0,32:32:81.27:1194,81,0	1/1:1,27:28:78.26:1172,78,0	1/1:0,27:27:78.26:1164,78,0	0/0:26,0:26:78.22:0,78,1039	0/0:42,0:42:99:0,123,1668	0/0:20,0:20:60.18:0,60,818	0/0:37,0:37:99:0,111,1507	1/1:1,15:16:45.60:616,46,0	1/1:1,19:20:60.09:853,60,0	1/1:0,41:41:99:1658,111,0	1/1:1,25:26:69.23:1015,69,0	1/1:1,31:32:90.25:1320,90,0	1/1:0,37:37:99:1483,99,0	0/0:36,0:36:99:0,105,1448	0/0:42,0:42:99:0,126,1700	1/1:0,35:36:96.32:1433,96,0	1/1:0,11:11:33.11:496,33,0
chr10	45744129	.	A	ATC	21510.49	PASS	AB=0.800;AC=49;AF=0.875;AN=56;BaseQRankSum=-1.861;DP=717;FS=0.986;HRun=0;HaplotypeScore=195.7348;InbreedingCoeff=0.8348;MQ=74.15;MQ0=0;MQRankSum=-8.318;QD=35.50;ReadPosRankSum=4.350;VQSLOD=5.3742;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,28:31:69.23:1180,69,0	0/1:3,1:4:42.22:42,0,70	0/0:33,0:31:50.15:0,50,650	0/0:41,0:38:50.17:0,50,793	1/1:9,22:29:38.29:665,38,0	1/1:5,15:19:42.13:719,42,0	1/1:3,17:20:57.07:950,57,0	1/1:10,35:46:93.34:1438,93,0	1/1:3,12:15:33.11:563,33,0	1/1:8,19:27:69.21:1094,69,0	1/1:2,14:16:27.09:462,27,0	1/1:6,24:30:60.21:1026,60,0	1/1:6,17:23:63.21:1043,63,0	1/1:5,20:25:57.10:959,57,0	1/1:8,27:34:77.98:1305,78,0	1/1:3,21:24:57.10:959,57,0	0/0:35,0:35:81.12:0,81,990	1/1:3,17:20:41:822,41,0	1/1:7,13:20:48.15:771,48,0	1/1:4,12:15:33.10:539,33,0	1/1:7,24:31:59.80:984,60,0	1/1:5,17:22:45.15:768,45,0	1/1:5,12:17:20.78:359,21,0	1/1:5,30:35:60.21:1025,60,0	1/1:3,18:21:48.13:822,48,0	1/1:5,25:30:81.26:1283,81,0	1/1:6,27:33:75.16:1269,75,0	1/1:2,12:14:27.09:462,27,0
chr10	45744149	.	ATCTGTCTG	A	3715.27	PASS	AB=0.833;AC=23;AF=0.411;AN=56;BaseQRankSum=-0.257;DP=678;FS=3.488;HRun=0;HaplotypeScore=330.9726;InbreedingCoeff=0.7591;MQ=57.31;MQ0=0;MQRankSum=-5.930;QD=14.07;ReadPosRankSum=2.413;VQSLOD=1.8148;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:21,8:29:9.01:136,9,0	0/0:1,0:2:6.02:0,6,85	0/0:25,0:21:21.04:0,21,371	0/0:39,0:27:20.80:0,21,308	0/0:21,0:31:23.93:0,24,511	0/0:13,0:20:11.95:0,12,287	0/0:19,0:23:45.11:0,45,990	0/0:29,0:35:44.86:0,45,428	1/1:6,5:11:12.04:265,12,0	0/0:21,0:25:36.11:0,36,758	0/0:10,0:19:3.01:0,3,32	1/1:14,14:28:33.10:749,33,0	1/1:10,25:35:26.82:589,27,0	1/1:8,14:22:9.03:194,9,0	0/0:15,0:36:23.46:0,23,356	0/0:17,0:31:30.03:0,30,711	0/0:14,0:37:51.15:0,51,1619	0/0:18,0:21:14.21:0,14,479	0/1:16,4:20:30.67:494,0,31	1/1:8,4:12:5.95:70,6,0	1/1:22,2:24:6.02:118,6,0	1/1:6,8:14:3.01:69,3,0	0/0:6,11:17:0:0,0,0	1/1:29,2:31:5.99:48,6,0	0/0:11,0:20:14.47:0,14,293	0/0:12,0:24:50.77:0,51,406	1/1:15,15:30:41.97:762,42,0	1/1:6,2:8:15:221,15,0
chr10	45744195	.	ATCTG	A	5493.98	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=4.517;DP=785;FS=11.752;HRun=0;HaplotypeScore=274.9606;InbreedingCoeff=0.8671;MQ=49.19;MQ0=13;MQRankSum=2.111;QD=20.89;ReadPosRankSum=3.274;VQSLOD=2.7568;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:26.99:0,27,608	0/0:4,0:4:12.04:0,12,270	0/0:28,0:14:27.98:0,28,502	0/0:35,0:10:21.07:0,21,426	1/1:22,10:30:36.12:575,36,0	1/1:13,8:21:36.11:565,36,0	1/1:13,3:15:24.08:382,24,0	0/0:44,0:43:84.29:0,84,1615	0/0:24,0:24:56.68:0,57,1244	1/1:4,28:32:83.72:1238,84,0	1/1:8,21:29:29.68:494,30,0	0/0:33,0:33:60.21:0,60,1376	0/0:36,0:36:44.92:0,45,776	0/0:26,0:26:36.11:0,36,809	1/1:16,27:42:48.42:793,48,0	1/1:13,12:25:30.10:475,30,0	0/0:47,0:47:89.97:0,90,1699	1/1:8,8:16:13.99:405,14,0	0/0:15,0:27:2.69:0,3,437	0/0:7,0:23:32.59:0,33,305	0/0:6,0:33:28.15:0,28,382	0/0:27,0:27:54.16:0,54,1144	0/0:31,0:31:51.14:0,51,1082	0/0:31,0:31:38.56:0,39,916	1/1:14,6:20:32.92:512,33,0	0/0:31,1:32:31.76:0,32,1560	0/1:23,0:29:54.59:55,0,203	0/0:3,0:5:5.38:0,5,54
chr10	45746939	.	TCAGGAG	T	1404.20	PASS	AC=4;AF=0.074;AN=54;BaseQRankSum=-1.945;DP=704;FS=1.614;HRun=0;HaplotypeScore=237.8339;InbreedingCoeff=0.9992;MQ=76.42;MQ0=0;MQRankSum=-7.841;QD=33.43;ReadPosRankSum=-0.806;VQSLOD=2.8322;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,138,2106	0/0:13,0:13:36.12:0,36,1208	0/0:25,0:24:42:0,42,1215	0/0:31,0:29:46.84:0,47,1499	0/0:24,0:24:54.18:0,54,841	1/1:3,19:22:45.07:895,45,0	1/1:4,16:20:30.10:630,30,0	0/0:29,0:29:72.22:0,72,2045	0/0:26,0:26:69.16:0,69,971	0/0:18,0:18:33.11:0,33,471	0/0:24,0:24:63.20:0,63,952	0/0:25,0:25:60.20:0,60,926	0/0:27,0:27:66.22:0,66,1028	0/0:22,0:22:48.15:0,48,721	0/0:31,0:31:78.24:0,78,1157	0/0:27,0:26:72.22:0,72,1063	0/0:36,0:36:87.30:0,87,2815	0/0:30,0:30:72.16:0,72,1029	0/0:15,0:15:30.09:0,30,917	0/0:36,0:36:93.30:0,93,2958	0/0:32,0:32:96.32:0,96,3022	0/0:23,0:23:60.66:0,61,902	0/0:21,0:21:48.15:0,48,721	0/0:28,0:28:78.18:0,78,1167	0/0:18,0:18:45.15:0,45,677	0/0:25,0:25:60.21:0,60,2013	0/0:24,0:24:63.20:0,63,1983	./.
chr10	45746942	.	G	GT	16946.81	PASS	AC=30;AF=0.556;AN=54;BaseQRankSum=14.000;DP=705;FS=0.910;HRun=0;HaplotypeScore=113.1891;InbreedingCoeff=0.9999;MQ=75.04;MQ0=0;MQRankSum=-0.420;QD=42.47;ReadPosRankSum=6.172;VQSLOD=4.1010;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,52:56:99:2446,154,0	0/0:13,0:13:39.13:0,39,546	0/0:23,0:22:66.08:0,66,856	0/0:34,0:32:59.16:0,59,1024	1/1:0,24:24:60.20:959,60,0	0/0:22,0:22:50.73:0,51,365	0/0:18,0:18:30.72:0,31,188	0/0:30,0:30:84.27:0,84,1160	1/1:3,25:28:72.25:1151,72,0	1/1:1,14:15:36.10:551,36,0	1/1:1,23:24:69.24:1102,69,0	1/1:0,21:22:60.20:939,60,0	1/1:0,27:27:75.26:1199,75,0	1/1:0,21:21:57.19:911,57,0	1/1:0,30:30:84.29:1342,84,0	1/1:2,26:26:75.26:1199,75,0	0/0:35,0:35:99:0,102,1389	1/1:1,29:30:78.22:1219,78,0	0/0:16,0:16:48.16:0,48,671	0/0:34,0:34:99:0,102,1409	0/0:33,0:33:99:0,99,1365	1/1:1,23:24:60.20:959,60,0	1/1:2,20:22:50.94:815,51,0	1/1:0,30:30:84.29:1340,84,0	1/1:0,18:18:51.17:815,51,0	0/0:24,0:24:72.23:0,72,990	0/0:24,0:24:72.24:0,72,1007	./.
chr10	45747113	.	G	GA	8708.14	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=7.146;DP=725;FS=1.309;HRun=3;HaplotypeScore=99.7743;InbreedingCoeff=0.9603;MQ=79.82;MQ0=0;MQRankSum=-2.302;QD=36.28;ReadPosRankSum=1.097;VQSLOD=4.8760;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,117,1390	0/0:13,0:13:33.10:0,33,396	0/0:16,0:16:24.53:0,25,491	0/0:20,0:20:38.26:0,38,467	1/1:1,39:40:99:1512,108,0	1/1:1,27:28:69.23:966,69,0	1/1:1,15:16:39.13:539,39,0	0/0:32,0:32:87.27:0,87,1044	0/0:29,0:29:84.24:0,84,997	1/1:3,32:35:96.32:1340,96,0	1/1:0,25:25:72.24:1008,72,0	0/0:23,0:23:69.20:0,69,817	0/0:18,0:18:54.17:0,54,648	0/0:27,0:27:78.24:0,78,934	1/1:0,24:24:66.22:924,66,0	1/1:3,26:29:66.20:906,66,0	0/0:28,0:28:78.24:0,78,936	1/1:1,24:25:69.23:966,69,0	0/0:22,0:22:66.19:0,66,774	0/0:31,0:31:90.28:0,90,1080	0/0:20,0:20:60.18:0,60,720	0/0:23,0:23:66.19:0,66,781	0/0:34,0:34:96.29:0,96,1151	0/0:17,0:17:51.16:0,51,612	1/1:1,17:18:39.13:546,39,0	0/0:27,2:29:0.22:0,0,852	0/0:36,0:36:99:0,105,1248	0/0:25,0:25:72.22:0,72,864
chr10	45748458	.	ACACG	A	2779.74	PASS	AB=0.997;AC=28;AF=0.500;AN=56;BaseQRankSum=-5.176;DP=714;FS=3.908;HRun=0;HaplotypeScore=142.6407;InbreedingCoeff=-0.1036;MQ=53.57;MQ0=23;MQRankSum=2.329;QD=4.89;ReadPosRankSum=-4.755;VQSLOD=1.0442;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:45,0:45:26.41:370,26,0	0/1:12,0:12:12.47:12,0,70	0/0:22,0:5:8.81:0,9,62	0/0:13,0:2:2.68:0,3,11	1/1:23,0:22:19.05:134,19,0	0/1:22,0:21:99:149,0,184	0/1:49,0:49:99:374,0,102	0/0:24,0:22:26.29:0,26,180	0/1:22,0:22:98.83:139,0,99	1/1:25,1:25:43.75:390,44,0	1/1:18,0:17:1.88:4,2,0	0/1:32,0:32:72.63:238,0,73	0/1:20,0:20:58.30:98,0,58	0/1:32,0:31:97.15:129,0,97	1/1:27,0:27:26.22:193,26,0	0/1:37,2:39:27.92:141,0,28	0/0:37,0:37:74.55:0,75,1072	1/1:24,1:25:9.95:113,10,0	0/0:18,0:15:6.85:0,7,266	0/1:15,0:15:10.27:10,0,67	0/1:43,0:41:70.30:70,0,406	0/1:25,0:25:18.12:84,0,18	0/1:17,0:17:34.60:99,0,35	0/1:44,0:42:99:179,0,461	1/1:18,0:16:1.89:4,2,0	0/0:24,0:24:6.48:0,6,492	0/1:14,0:13:21.13:21,0,150	0/0:8,0:8:11.94:0,12,145
chr10	45748460	.	ACG	A	5156.71	PASS	AB=0.896;AC=35;AF=0.625;AN=56;BaseQRankSum=-5.212;DP=706;FS=1.814;HRun=0;HaplotypeScore=117.4370;InbreedingCoeff=0.1074;MQ=53.63;MQ0=22;MQRankSum=3.876;QD=8.44;ReadPosRankSum=-2.477;VQSLOD=4.3212;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:42,0:42:53.06:419,53,0	1/1:11,1:12:8.62:79,9,0	0/0:23,0:6:11.73:0,12,79	0/0:12,0:2:5.48:0,5,23	0/1:17,5:21:4.38:329,0,4	0/1:21,1:21:48.08:174,0,48	1/1:48,0:48:18.42:459,18,0	0/1:23,1:22:45.48:45,0,137	1/1:20,1:21:7.96:180,8,0	1/1:4,24:27:34.42:566,34,0	1/1:3,15:17:9.02:138,9,0	1/1:33,0:33:9.23:336,9,0	1/1:20,0:20:11.37:128,11,0	0/1:31,0:30:9.35:178,0,9	1/1:23,3:26:45.56:566,46,0	0/1:7,31:38:11.22:373,0,11	0/0:36,0:36:41.66:0,42,723	1/1:5,20:25:9.61:214,10,0	0/0:18,0:15:6.01:0,6,245	0/1:16,0:16:7.65:8,0,86	0/1:43,0:41:71.75:72,0,360	1/1:24,0:24:10.26:117,10,0	1/1:17,0:17:16.57:143,17,0	0/1:43,1:42:18.99:361,0,19	0/1:6,12:16:17.43:169,0,17	0/1:24,0:24:38.71:39,0,354	0/1:15,0:13:65.61:66,0,113	0/0:6,0:6:11.93:0,12,97
chr10	45750543	.	AAAC	A	369.39	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.828;DP=713;FS=6.522;HRun=0;HaplotypeScore=100.0770;InbreedingCoeff=0.9994;MQ=74.06;MQ0=3;MQRankSum=-1.984;QD=30.78;ReadPosRankSum=0.893;VQSLOD=3.9367;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,126,2707	1/1:0,12:12:30.10:464,30,0	0/0:28,0:25:66.22:0,66,1352	0/0:24,0:22:56.67:0,57,1043	0/0:22,0:22:63.19:0,63,1285	0/0:25,0:25:72.25:0,72,1576	0/0:17,0:17:42.13:0,42,878	0/0:37,0:37:99:0,102,2057	0/0:24,0:24:69.21:0,69,1429	0/0:26,0:26:72.25:0,72,1556	0/0:24,0:24:69.22:0,69,1464	0/0:25,0:25:72.23:0,72,1514	0/0:28,0:28:78.27:0,78,1665	0/0:23,0:23:63.20:0,63,1308	0/0:30,0:30:87.30:0,87,1907	0/0:26,0:26:75.24:0,75,1580	0/0:25,0:25:72.18:0,72,1465	0/0:27,0:26:75.26:0,75,1631	0/0:23,0:22:57.20:0,57,1223	0/0:28,0:28:81.26:0,81,1690	0/0:33,0:33:99:0,99,2056	0/0:36,0:36:96.29:0,96,1999	0/0:17,0:17:48.16:0,48,1032	0/0:25,0:25:69.21:0,69,1446	0/0:20,0:20:60.19:0,60,1273	0/0:21,0:20:48.16:0,48,998	0/0:26,0:25:63.22:0,63,1355	0/0:18,0:18:54.19:0,54,1183
chr10	45756032	.	C	CT	612.76	PASS	AB=0.569;AC=3;AF=0.054;AN=56;BaseQRankSum=-3.280;DP=738;FS=0.000;HRun=12;HaplotypeScore=95.0943;InbreedingCoeff=0.5925;MQ=73.23;MQ0=0;MQRankSum=0.193;QD=12.01;ReadPosRankSum=-1.533;VQSLOD=3.0408;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,1:34:38.65:0,39,474	0/0:11,0:11:26.82:0,27,197	0/0:22,0:20:10.35:0,10,123	0/0:16,0:15:7.65:0,8,97	0/0:33,1:36:21.12:0,21,433	0/1:7,19:29:12.08:339,0,12	1/1:4,18:22:39.06:379,39,0	0/0:23,2:26:17.53:0,18,282	0/0:21,0:22:22.51:0,23,288	0/0:31,1:32:51.03:0,51,526	0/0:30,0:34:72.68:0,73,480	0/0:32,0:34:67.05:0,67,463	0/0:34,0:34:86.08:0,86,618	0/0:19,0:19:46.72:0,47,334	0/0:39,0:41:89.71:0,90,631	0/0:28,0:28:47.37:0,47,478	0/0:23,0:23:48.60:0,49,390	0/0:17,0:20:39.30:0,39,254	0/0:20,0:21:24.25:0,24,301	0/0:33,1:37:34.46:0,34,512	0/0:18,0:18:32.42:0,32,230	0/0:22,0:24:54.71:0,55,382	0/0:19,0:19:38.72:0,39,284	0/0:22,1:24:29.51:0,30,369	0/0:32,2:38:14.12:0,14,382	0/0:15,0:16:11.79:0,12,239	0/0:30,0:33:68.61:0,69,475	0/0:18,0:20:51.78:0,52,361
chr10	45756855	.	GAC	G	685.42	PASS	AB=0.892;AC=40;AF=0.870;AN=46;BaseQRankSum=3.777;DP=478;FS=0.000;HRun=0;HaplotypeScore=86.1300;InbreedingCoeff=0.0402;MQ=73.85;MQ0=14;MQRankSum=-0.011;QD=1.91;ReadPosRankSum=0.242;VQSLOD=1.6584;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:19,4:23:51.77:52,0,56	./.	./.	./.	1/1:12,0:15:2.27:8,2,0	0/1:13,0:13:0.03:0,0,0	1/1:11,8:19:8.99:96,9,0	./.	1/1:8,5:13:3.01:32,3,0	./.	1/1:9,0:14:4.66:19,5,0	1/1:9,2:11:8.48:75,8,0	0/1:8,2:12:32.13:48,0,32	0/0:7,0:7:0.89:0,1,2	1/1:10,0:16:14.20:70,14,0	1/1:5,0:12:11.26:56,11,0	0/1:27,0:28:12.95:13,0,197	1/1:15,0:18:5.68:28,6,0	1/1:18,0:18:2.84:14,3,0	1/1:8,0:11:2.84:14,3,0	1/1:34,0:32:2.84:14,3,0	1/1:12,0:12:0.47:1,0,0	1/1:5,3:9:8.86:78,9,0	1/1:25,4:28:8.86:78,9,0	1/1:5,0:10:8.28:38,8,0	1/1:15,0:17:5.68:28,6,0	1/1:12,0:15:2.47:14,2,0	1/1:2,0:4:2.84:14,3,0
chr10	45769040	.	C	CAA	3120.23	PASS	AB=0.838;AC=29;AF=0.518;AN=56;BaseQRankSum=0.595;DP=516;FS=9.030;HRun=14;HaplotypeScore=74.0939;InbreedingCoeff=0.7643;MQ=52.49;MQ0=12;MQRankSum=-2.446;QD=11.64;ReadPosRankSum=-1.545;VQSLOD=1.6295;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,7:17:15.04:168,15,0	0/0:11,0:10:5.27:0,5,15	0/0:23,0:7:10.89:0,11,70	0/1:10,0:5:8.92:9,0,30	0/0:23,0:30:31.87:0,32,334	1/1:10,11:23:36.10:450,36,0	1/1:8,6:15:25.93:279,26,0	0/0:23,0:24:27.91:0,28,217	1/1:5,8:14:17.42:205,17,0	0/0:22,0:22:44.12:0,44,342	0/0:18,0:22:35.55:0,36,324	1/1:12,3:16:6.01:67,6,0	1/1:11,7:15:11.93:108,12,0	1/1:10,9:19:18.05:222,18,0	0/0:12,0:12:23.89:0,24,201	0/0:17,0:18:26.53:0,27,212	0/0:24,0:26:41.51:0,42,372	0/0:14,0:11:22.28:0,22,167	0/1:6,3:9:10.29:98,0,10	1/1:9,14:25:18.66:405,19,0	0/1:9,3:12:3.16:143,0,3	1/1:8,6:16:18:216,18,0	1/1:14,1:18:22.32:173,22,0	1/1:3,8:12:12.18:263,12,0	0/0:18,0:19:34.13:0,34,266	0/0:19,0:23:32.13:0,32,246	1/1:14,7:21:16.92:402,17,0	1/1:6,5:9:11.40:126,11,0
chr10	45769054	.	AG	A	166.36	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=1.832;DP=458;FS=2.438;HRun=1;HaplotypeScore=64.8675;InbreedingCoeff=0.8975;MQ=64.59;MQ0=9;MQRankSum=-0.837;QD=12.80;ReadPosRankSum=0.039;VQSLOD=2.2869;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:12:20.92:0,21,168	1/1:2,10:12:21:258,21,0	0/0:27,0:11:23.26:0,23,184	0/0:15,0:8:16.78:0,17,162	0/0:30,0:30:71.16:0,71,638	0/0:16,0:16:41.78:0,42,316	0/0:13,0:13:35.67:0,36,269	0/0:24,0:24:55.75:0,56,549	0/0:12,0:12:26.43:0,26,187	0/0:28,0:26:58.66:0,59,672	0/0:23,0:23:58.34:0,58,629	0/0:10,0:9:14.83:0,15,104	0/0:11,0:8:11.58:0,12,121	0/0:15,0:14:29.77:0,30,220	0/0:11,0:11:30.08:0,30,362	0/0:18,0:18:43.67:0,44,468	0/0:25,0:25:59.71:0,60,635	0/0:10,0:10:14.23:0,14,220	0/0:12,0:12:27.01:0,27,262	0/0:23,0:23:56.56:0,57,453	0/0:9,0:9:26.92:0,27,222	0/0:13,0:13:32.61:0,33,270	0/0:12,0:12:31.89:0,32,245	0/0:12,0:12:29.52:0,30,223	0/0:15,0:15:34.40:0,34,400	0/0:18,0:18:37.23:0,37,447	0/0:21,0:18:50.73:0,51,420	0/0:8,0:7:14.97:0,15,119
chr10	45769989	.	C	CTCCTCTCCTCT	10598.71	PASS	AC=42;AF=0.808;AN=52;BaseQRankSum=10.284;DP=374;FS=1.129;HRun=0;HaplotypeScore=124.0850;InbreedingCoeff=0.7907;MQ=56.70;MQ0=2;MQRankSum=-10.515;QD=42.39;ReadPosRankSum=0.736;VQSLOD=4.5945;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:15:15.05:631,15,0	./.	0/0:16,0:12:18.08:0,18,771	0/0:21,0:17:41.35:0,41,1210	1/1:21,0:14:27.09:746,27,0	1/1:15,0:10:9.03:378,9,0	1/1:9,0:9:3.01:53,3,0	0/0:21,0:21:42.12:0,42,1294	1/1:12,0:10:12.04:502,12,0	1/1:11,0:10:21.07:742,21,0	1/1:12,0:11:15.05:473,15,0	1/1:12,0:11:18.06:755,18,0	1/1:10,0:5:9.03:227,9,0	1/1:16,0:11:21.07:805,21,0	1/1:9,0:4:3.01:127,3,0	1/1:5,0:3:3.01:125,3,0	0/0:38,0:38:99:0,105,3399	1/1:11,0:11:24.06:613,24,0	1/1:9,0:7:15.05:483,15,0	1/1:17,0:11:21.03:665,21,0	1/1:7,1:9:6.02:250,6,0	./.	1/1:14,0:13:24.08:887,24,0	1/1:6,0:5:6.02:157,6,0	1/1:11,0:9:21.07:848,21,0	0/0:19,0:19:42.14:0,42,1417	1/1:13,0:10:17.57:753,18,0	1/1:8,0:8:12.04:379,12,0
chr10	45769992	.	C	CTCTCCTCTTCTACTCTTCT	24582.51	PASS	AC=42;AF=0.808;AN=52;BaseQRankSum=-6.767;DP=473;FS=1.068;HRun=0;HaplotypeScore=127.1361;InbreedingCoeff=0.8059;MQ=55.77;MQ0=2;MQRankSum=-10.532;QD=70.84;ReadPosRankSum=1.392;VQSLOD=4.6991;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,6:18:17.98:1386,18,0	./.	0/0:13,0:11:31.21:0,31,1121	0/0:24,0:20:47.05:0,47,1791	1/1:7,8:21:33.06:1626,33,0	1/1:7,5:18:9.03:821,9,0	1/1:3,3:13:3.01:53,3,0	0/0:23,0:23:54.15:0,54,1985	1/1:5,4:16:12.04:1096,12,0	1/1:6,5:16:33.11:2241,33,0	1/1:3,5:17:15.05:1316,15,0	1/1:3,6:15:18.06:1643,18,0	1/1:5,4:8:9.03:376,9,0	1/1:5,9:13:21.07:1696,21,0	1/1:4,2:11:3.01:274,3,0	1/1:6,1:12:5.91:290,6,0	0/0:39,0:39:99:0,108,5135	1/1:11,1:12:27.05:1241,27,0	1/1:5,2:10:30.10:1883,30,0	1/1:6,9:19:21.03:1604,21,0	1/1:9,1:8:8.96:566,9,0	./.	1/1:4,6:15:24.08:1992,24,0	1/1:4,2:8:3.01:273,3,0	1/1:2,7:19:21.07:1811,21,0	0/0:16,0:16:42.14:0,42,2008	1/1:1,9:14:17.67:1643,18,0	1/1:6,2:10:12.04:751,12,0
chr10	45770774	.	AACAC	A	1189.74	PASS	AB=0.873;AC=26;AF=0.542;AN=48;BaseQRankSum=1.767;DP=522;FS=2.915;HRun=0;HaplotypeScore=95.8803;InbreedingCoeff=0.4116;MQ=50.48;MQ0=21;MQRankSum=-0.953;QD=4.17;ReadPosRankSum=0.044;VQSLOD=1.8248;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:22,2:23:6.01:92,6,0	1/1:4,1:5:3.01:46,3,0	./.	./.	0/0:19,0:26:16.66:0,17,211	1/1:13,0:16:6.01:56,6,0	1/1:24,0:23:4.25:33,4,0	./.	1/1:14,0:17:5.84:56,6,0	0/0:15,0:17:25.87:0,26,362	0/0:12,0:12:12.04:0,12,236	0/1:17,3:21:24.40:162,0,24	1/1:9,4:13:12.04:184,12,0	1/1:12,2:14:11.99:158,12,0	0/0:16,0:26:11.22:0,11,207	0/0:18,0:17:12.04:0,12,206	0/1:39,2:41:15.94:16,0,556	0/0:12,0:13:5.99:0,6,74	0/1:22,1:22:40.02:40,0,64	0/0:12,0:14:5.65:0,6,31	0/0:25,0:27:2.74:0,3,12	1/1:8,4:12:3.01:46,3,0	1/1:13,1:14:8.69:85,9,0	1/1:22,7:29:12.04:184,12,0	0/0:9,0:12:5.21:0,5,112	1/1:11,0:13:15.01:151,15,0	0/1:11,1:14:42.55:49,0,43	./.
chr10	45773779	.	GTGAA	G	387.71	PASS	AB=0.950;AC=3;AF=0.054;AN=56;BaseQRankSum=4.720;DP=660;FS=2.291;HRun=0;HaplotypeScore=102.8645;InbreedingCoeff=0.6460;MQ=61.20;MQ0=3;MQRankSum=0.263;QD=9.23;ReadPosRankSum=-0.671;VQSLOD=2.7142;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:63.20:0,63,1469	0/0:11,0:11:15.05:0,15,361	0/0:19,0:15:12.01:0,12,214	0/0:18,0:16:12.04:0,12,268	0/0:26,0:26:57.20:0,57,1368	0/1:18,1:19:0:0,0,1013	0/0:20,0:20:30.10:0,30,700	0/0:26,0:26:27.09:0,27,585	0/0:23,0:23:51.18:0,51,1183	0/0:32,1:33:30.11:0,30,1753	0/0:17,0:17:24.08:0,24,577	0/0:24,0:24:33.11:0,33,778	0/0:25,0:25:39.13:0,39,937	0/0:26,0:26:48.16:0,48,1132	0/0:25,0:25:54.19:0,54,1278	0/0:34,0:34:69.24:0,69,1654	1/1:13,10:23:30.10:482,30,0	0/0:18,0:18:45.13:0,45,1028	0/0:29,0:26:5.11:0,5,629	0/0:30,0:30:75.26:0,75,1792	0/0:12,0:12:30.09:0,30,673	0/0:26,0:26:66.23:0,66,1534	0/0:22,0:22:33.07:0,33,725	0/0:19,0:19:42.10:0,42,959	0/0:24,0:24:51.16:0,51,1167	0/0:27,1:28:9.02:0,9,1195	0/0:33,0:33:78.27:0,78,1871	0/0:21,0:21:51.18:0,51,1220
chr10	45774550	.	GTCCGC	G	28223.07	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=11.316;DP=679;FS=6.881;HRun=0;HaplotypeScore=147.6740;InbreedingCoeff=0.9969;MQ=80.09;MQ0=0;MQRankSum=-8.187;QD=53.45;ReadPosRankSum=6.832;VQSLOD=4.3447;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,47:50:99:2686,126,0	1/1:0,7:7:18.06:383,18,0	0/0:25,0:25:63.21:0,63,1771	0/0:23,0:23:57.20:0,57,1694	1/1:2,25:27:66.23:1406,66,0	1/1:1,12:13:30.10:639,30,0	1/1:2,9:11:27.09:575,27,0	0/0:30,0:30:81.28:0,81,2365	1/1:1,27:28:78.27:1662,78,0	1/1:1,16:17:48.16:1022,48,0	1/1:1,10:11:30.10:639,30,0	1/1:2,28:30:78.27:1662,78,0	1/1:3,18:22:57.20:1212,57,0	1/1:5,26:31:72.25:1527,72,0	1/1:2,29:31:72.25:1535,72,0	1/1:1,33:34:96.33:2037,96,0	0/0:38,0:38:99:0,114,3569	1/1:1,20:21:51.18:1086,51,0	1/1:4,12:16:36.08:717,36,0	1/1:2,21:23:54.18:1125,54,0	1/1:3,26:29:63.69:1343,64,0	1/1:0,9:9:24.08:511,24,0	1/1:0,22:23:63.01:1342,63,0	1/1:1,39:40:96.33:2046,96,0	1/1:2,21:23:57.20:1214,57,0	0/0:34,1:35:38.38:0,38,2987	1/1:1,22:23:60.21:1277,60,0	1/1:0,9:9:27.09:575,27,0
chr10	45777302	.	CT	C	3646.50	PASS	AB=0.766;AC=30;AF=0.536;AN=56;BaseQRankSum=7.908;DP=592;FS=3.407;HRun=11;HaplotypeScore=63.3990;InbreedingCoeff=0.8279;MQ=60.19;MQ0=11;MQRankSum=3.019;QD=11.54;ReadPosRankSum=5.197;VQSLOD=3.2306;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,30:36:75.07:599,75,0	0/0:9,0:10:23.89:0,24,238	0/0:16,0:8:7.91:0,8,82	0/0:17,0:10:11.68:0,12,83	0/0:20,1:24:42:0,42,360	1/1:0,5:5:14.98:123,15,0	1/1:1,17:16:32.96:271,33,0	0/0:31,0:28:54.10:0,54,560	1/1:3,19:21:6.95:263,7,0	0/0:28,0:27:51.12:0,51,537	0/0:17,0:17:36.02:0,36,357	1/1:4,6:10:2.96:25,3,0	1/1:5,23:26:38.60:320,39,0	1/1:7,14:21:32.92:271,33,0	0/0:29,1:30:38.27:0,38,568	0/0:17,0:17:38.87:0,39,371	0/0:33,0:33:84.17:0,84,878	0/1:27,5:31:14.16:14,0,433	0/1:12,10:21:1:178,0,1	1/1:5,12:17:26.88:210,27,0	1/1:0,8:8:11.99:99,12,0	1/1:3,13:15:20.93:212,21,0	1/1:5,10:13:26.94:221,27,0	1/1:6,25:29:39.93:534,40,0	0/0:25,2:26:26.44:0,26,468	0/0:24,0:25:53.97:0,54,557	1/1:4,15:20:28.04:209,28,0	1/1:2,6:8:11.98:99,12,0
chr10	45779295	.	C	CT	1430.67	PASS	AB=0.833;AC=28;AF=0.500;AN=56;BaseQRankSum=-4.526;DP=445;FS=1.679;HRun=14;HaplotypeScore=60.3943;InbreedingCoeff=0.7990;MQ=59.88;MQ0=9;MQRankSum=1.243;QD=7.57;ReadPosRankSum=-1.695;VQSLOD=2.1787;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,19:28:25.54:331,26,0	0/0:11,0:11:23.55:0,24,154	0/0:12,0:8:5.45:0,5,25	0/0:3,0:3:2.95:0,3,19	0/0:30,0:30:76.70:0,77,499	1/1:7,9:17:14.84:120,15,0	1/1:6,7:13:18.39:150,18,0	0/0:35,1:38:17.67:0,18,310	1/1:4,1:9:20.31:125,20,0	0/0:26,0:24:46.64:0,47,304	0/0:15,0:14:32.32:0,32,210	1/1:12,0:11:14.91:87,15,0	1/1:5,1:10:11.62:81,12,0	1/1:5,1:10:8.52:54,9,0	0/0:14,0:15:37.43:0,37,235	0/0:22,0:22:56.01:0,56,363	0/0:27,0:27:46.60:0,47,306	0/0:20,0:20:38.15:0,38,249	1/1:12,6:15:4.52:142,5,0	0/1:5,5:10:4.36:76,0,4	1/1:4,2:7:8.84:67,9,0	1/1:4,0:4:8.60:53,9,0	0/1:7,0:7:0:0,0,0	1/1:7,0:6:2.77:31,3,0	0/0:16,0:16:35.33:0,35,224	0/0:20,0:20:38.33:0,38,248	1/1:5,14:20:17.26:190,17,0	1/1:6,7:10:15:132,15,0
chr10	45780347	.	C	CT	1093.12	PASS	AB=0.881;AC=18;AF=0.321;AN=56;BaseQRankSum=-1.721;DP=421;FS=18.377;HRun=13;HaplotypeScore=65.0493;InbreedingCoeff=0.5693;MQ=78.22;MQ0=1;MQRankSum=1.843;QD=6.39;ReadPosRankSum=-2.061;VQSLOD=0.2640;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,21:25:9.89:377,10,0	0/0:2,0:2:2.96:0,3,20	0/1:34,0:21:27.17:27,0,63	0/1:28,0:16:0.52:1,0,70	0/0:13,0:13:29.71:0,30,203	0/0:10,0:10:14.77:0,15,103	0/0:14,0:16:25.74:0,26,170	0/0:22,0:24:34.53:0,35,232	1/1:1,12:14:20.19:216,20,0	0/0:7,0:7:14.07:0,14,89	0/0:6,0:7:13.88:0,14,88	1/1:2,5:7:6.01:56,6,0	1/1:2,5:7:11.99:105,12,0	1/1:5,11:16:15.49:140,15,0	0/0:13,1:18:0.88:0,1,142	0/0:11,0:11:17.80:0,18,123	0/0:37,0:38:69.40:0,69,476	0/0:20,0:21:3.06:0,3,247	0/1:10,0:11:7.35:7,0,71	0/0:9,0:10:6.20:0,6,109	0/0:17,0:20:27.78:0,28,176	1/1:0,2:3:6.48:57,6,0	0/1:2,5:7:8.55:72,0,9	1/1:6,9:15:24.01:218,24,0	0/0:15,0:17:25.77:0,26,170	0/0:12,0:13:16.82:0,17,109	0/0:10,0:10:14.77:0,15,103	0/0:13,0:13:26.75:0,27,183
chr10	45781607	.	TG	T	194.39	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.000;DP=570;FS=6.260;HRun=8;HaplotypeScore=55.8762;InbreedingCoeff=0.9550;MQ=80.64;MQ0=0;MQRankSum=-0.379;QD=19.44;ReadPosRankSum=-1.083;VQSLOD=3.0179;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:93.12:0,93,1077	1/1:0,10:10:30.05:289,30,0	0/0:13,0:14:31.78:0,32,328	0/0:17,1:18:10.76:0,11,333	0/0:27,0:27:72.20:0,72,857	0/0:25,0:25:69.21:0,69,828	0/0:18,0:18:39.12:0,39,471	0/0:22,0:22:54.15:0,54,640	0/0:21,0:21:63.18:0,63,750	0/0:24,0:25:63.05:0,63,724	0/0:22,0:22:60.17:0,60,703	0/0:18,0:18:45.13:0,45,532	0/0:25,0:25:69.21:0,69,833	0/0:13,0:13:30.09:0,30,362	0/0:30,0:30:90.27:0,90,1075	0/0:27,0:27:78.24:0,78,938	0/0:10,0:10:27.08:0,27,326	0/0:15,0:15:39.12:0,39,471	0/0:16,0:16:45.12:0,45,530	0/0:24,0:24:57.17:0,57,688	0/0:16,0:16:39.12:0,39,471	0/0:18,0:18:51.16:0,51,616	0/0:20,0:20:60.17:0,60,714	0/0:8,0:8:21.06:0,21,254	0/0:27,0:27:75.23:0,75,906	0/0:28,0:28:72.20:0,72,845	0/0:29,0:29:84.26:0,84,1015	0/0:12,0:12:36.11:0,36,435
chr10	45782528	.	G	GA	8244.27	PASS	AB=0.668;AC=45;AF=0.804;AN=56;BaseQRankSum=-7.685;DP=566;FS=18.987;HRun=11;HaplotypeScore=67.3342;InbreedingCoeff=0.5915;MQ=71.10;MQ0=1;MQRankSum=1.867;QD=17.14;ReadPosRankSum=1.027;VQSLOD=3.9717;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,31:39:67.29:697,67,0	1/1:0,6:6:18.04:183,18,0	0/0:11,0:8:8.84:0,9,58	0/0:13,0:13:5.53:0,6,101	1/1:4,31:36:75.46:746,75,0	1/1:3,12:15:12.84:312,13,0	1/1:2,5:7:12.02:122,12,0	0/0:29,0:31:75.76:0,76,569	1/1:2,9:12:32.86:308,33,0	1/1:14,20:35:30.23:519,30,0	1/1:11,20:33:5.80:468,6,0	1/1:3,11:16:22.27:293,22,0	1/1:1,16:17:30.94:307,31,0	1/1:5,10:15:33.06:334,33,0	1/1:5,21:26:33.88:525,34,0	0/1:5,14:20:0.21:307,0,0	0/0:28,2:30:35.25:0,35,457	1/1:4,22:26:4.48:517,4,0	1/1:4,9:13:26.98:250,27,0	1/1:6,15:22:18.60:336,19,0	0/1:4,11:15:13.41:241,0,13	1/1:4,20:25:21.01:428,21,0	1/1:2,14:17:8.99:306,9,0	1/1:2,6:9:17.87:167,18,0	1/1:7,15:22:36.07:365,36,0	0/1:18,4:24:63.77:64,0,279	1/1:7,16:24:26.21:299,26,0	1/1:0,7:7:15.03:152,15,0
chr10	45782829	.	T	TG	635.31	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=-6.125;DP=547;FS=7.975;HRun=9;HaplotypeScore=55.8600;InbreedingCoeff=0.8854;MQ=73.86;MQ0=0;MQRankSum=0.183;QD=11.55;ReadPosRankSum=1.422;VQSLOD=2.1853;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:53.96:0,54,467	1/1:1,6:7:18.05:199,18,0	0/0:17,0:17:23.90:0,24,201	0/1:12,0:10:0.28:0,0,40	0/0:23,0:23:62.95:0,63,540	1/1:7,9:16:21.06:232,21,0	1/1:6,14:20:10.04:339,10,0	0/0:27,0:27:59.97:0,60,519	0/0:14,0:14:41.95:0,42,355	0/0:30,0:30:71.98:0,72,624	0/0:19,0:19:35.97:0,36,312	0/0:21,0:21:53.59:0,54,467	0/0:21,0:21:53.98:0,54,468	0/0:14,0:15:38.02:0,38,318	0/0:24,0:24:53.97:0,54,469	0/0:16,0:16:41.99:0,42,364	0/0:25,0:25:71.97:0,72,621	0/0:17,0:17:44.98:0,45,391	0/0:16,0:16:41.94:0,42,355	0/0:17,0:17:44.98:0,45,390	0/0:18,0:18:53.99:0,54,469	0/0:17,1:18:17.79:0,18,379	0/0:14,0:14:35.96:0,36,306	0/0:13,0:12:32.95:0,33,279	0/0:16,0:16:41.98:0,42,364	0/0:39,0:39:98.89:0,99,848	0/0:35,0:32:89.88:0,90,772	0/0:12,0:12:32.99:0,33,286
chr10	45785325	.	C	CT	2622.30	PASS	AB=0.718;AC=35;AF=0.625;AN=56;BaseQRankSum=-3.231;DP=554;FS=1.882;HRun=15;HaplotypeScore=64.2075;InbreedingCoeff=-0.2750;MQ=58.85;MQ0=19;MQRankSum=-0.901;QD=5.21;ReadPosRankSum=-1.952;VQSLOD=1.7959;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:17,15:34:68.80:113,0,69	0/0:3,0:4:1.93:0,2,6	0/0:30,0:11:1.94:0,2,6	0/0:16,0:4:1.42:0,1,4	1/1:20,5:30:6.46:225,6,0	0/1:9,9:19:36.95:67,0,37	0/1:11,8:21:3.72:85,0,4	1/1:19,13:32:13.29:250,13,0	1/1:7,10:18:1.91:114,2,0	0/1:10,10:19:6.92:174,0,7	0/1:9,7:16:0.07:101,0,0	1/1:7,4:10:3:25,3,0	0/1:12,1:13:5.16:74,0,5	1/1:7,7:13:14.78:106,15,0	0/1:21,4:26:25.45:144,0,25	0/1:18,1:21:13.88:86,0,14	0/1:15,26:40:25.87:162,0,26	0/1:7,14:21:22.65:101,0,23	0/1:8,6:18:11.52:109,0,12	1/1:6,8:14:8.06:136,8,0	1/1:6,4:11:5:59,5,0	1/1:9,7:15:2.93:125,3,0	1/1:12,2:16:12.25:102,12,0	0/1:6,14:21:27.15:113,0,27	0/1:13,9:23:17.76:72,0,18	1/1:9,8:17:24.82:198,25,0	0/1:2,9:12:15.79:17,0,16	0/1:5,0:5:8.40:8,0,11
chr10	45785937	.	CTT	C	2752.32	PASS	AB=0.687;AC=37;AF=0.661;AN=56;BaseQRankSum=-2.691;DP=598;FS=2.535;HRun=17;HaplotypeScore=86.0329;InbreedingCoeff=0.3078;MQ=74.26;MQ0=5;MQRankSum=-2.457;QD=6.00;ReadPosRankSum=4.515;VQSLOD=-0.0452;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,18:26:35.61:285,36,0	1/1:2,6:9:2.64:63,3,0	0/0:35,0:19:20.80:0,21,161	0/1:15,0:12:1.71:2,0,80	0/1:6,1:15:0.80:1,0,108	1/1:7,12:21:37.35:283,37,0	1/1:8,8:22:4.99:129,5,0	0/1:10,2:27:11.36:11,0,155	1/1:8,1:9:1.43:21,1,0	0/1:8,3:27:20.75:21,0,168	0/1:10,3:16:4.67:5,0,65	1/1:8,10:22:11.66:185,12,0	0/1:6,6:12:56.26:56,0,61	1/1:10,12:24:7.08:179,7,0	0/1:7,1:16:2.91:3,0,83	0/0:6,1:17:1.36:0,1,68	0/0:18,0:25:49.24:0,49,474	0/0:11,0:26:34.01:0,34,177	0/1:8,4:14:15.59:95,0,16	1/1:11,14:27:40.99:308,41,0	1/1:9,16:26:28.88:255,29,0	1/1:8,7:16:14.19:106,14,0	1/1:6,12:18:26.54:213,27,0	1/1:6,14:24:25.65:228,26,0	0/1:9,2:27:14.38:14,0,103	0/0:21,1:36:17.32:0,17,183	1/1:12,11:25:22.67:201,23,0	1/1:5,11:20:26.16:267,26,0
chr10	45789203	.	GA	G	12114.16	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=11.200;DP=527;FS=7.918;HRun=6;HaplotypeScore=62.9423;InbreedingCoeff=0.9976;MQ=79.33;MQ0=0;MQRankSum=-4.555;QD=28.77;ReadPosRankSum=5.640;VQSLOD=5.0522;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:0,29:29:75.19:806,75,0	1/1:0,8:8:24.06:258,24,0	0/0:13,0:13:30.56:0,31,373	0/0:16,0:17:39.02:0,39,463	1/1:0,17:17:51.13:548,51,0	1/1:3,29:32:87.22:935,87,0	1/1:1,21:22:60.15:645,60,0	0/0:34,0:34:93.30:0,93,1212	1/1:2,18:20:48.12:516,48,0	1/1:3,19:22:60.15:643,60,0	1/1:2,12:14:36.09:387,36,0	1/1:1,9:10:27.07:290,27,0	1/1:0,23:23:66.17:709,66,0	1/1:1,18:19:48.12:516,48,0	1/1:0,22:22:66.17:709,66,0	1/1:2,24:26:69.17:742,69,0	0/0:23,0:23:63.15:0,63,795	1/1:0,23:23:63.16:677,63,0	1/1:2,10:12:30.06:315,30,0	1/1:2,18:20:48.11:515,48,0	1/1:0,16:16:45.11:484,45,0	1/1:1,15:16:42.11:451,42,0	1/1:0,20:20:51.13:548,51,0	1/1:1,13:14:36.09:387,36,0	1/1:0,11:11:33.08:355,33,0	0/0:18,1:19:21.92:0,22,638	1/1:1,16:17:39.10:419,39,0	1/1:0,8:8:24.06:258,24,0
chr10	45792696	.	T	TG	536.63	PASS	AB=0.977;AC=11;AF=0.196;AN=56;BaseQRankSum=-0.852;DP=558;FS=17.262;HRun=0;HaplotypeScore=73.7701;InbreedingCoeff=0.2211;MQ=52.62;MQ0=46;MQRankSum=7.961;QD=3.03;ReadPosRankSum=1.845;VQSLOD=1.5643;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:16:43.48:0,43,288	0/0:8,0:8:23.85:0,24,194	0/1:28,0:7:2.13:2,0,47	0/0:23,0:13:10.78:0,11,105	0/1:15,1:15:5.10:109,0,5	0/0:25,0:25:65.71:0,66,592	0/0:18,0:14:31.66:0,32,216	0/0:28,0:28:75.74:0,76,524	1/1:0,13:14:9.02:95,9,0	0/1:19,0:16:3.42:135,0,3	0/1:18,0:16:32.11:32,0,48	0/0:14,0:13:31.60:0,32,208	0/0:12,0:10:17.26:0,17,124	0/0:9,0:8:16.81:0,17,103	0/1:18,0:18:37.10:37,0,81	0/1:22,0:21:22.05:64,0,22	0/0:36,0:33:61.95:0,62,439	0/1:23,3:21:20.73:139,0,21	0/0:29,0:27:77.56:0,78,608	0/0:29,0:29:76.65:0,77,643	0/0:11,0:10:25.46:0,25,149	0/0:18,0:18:22.35:0,22,269	0/0:17,0:16:36.80:0,37,254	0/0:8,0:6:11.36:0,11,82	1/1:16,0:16:1.07:67,1,0	0/0:26,0:25:65.44:0,65,497	0/0:25,0:23:53.36:0,53,349	0/0:22,0:18:40.33:0,40,288
chr10	45792697	.	T	TG	192.03	PASS	AB=0.957;AC=9;AF=0.161;AN=56;BaseQRankSum=1.083;DP=555;FS=2.266;HRun=0;HaplotypeScore=73.3364;InbreedingCoeff=0.1772;MQ=52.47;MQ0=47;MQRankSum=5.655;QD=1.18;ReadPosRankSum=0.788;VQSLOD=1.6300;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:16:43.83:0,44,300	0/0:8,0:8:23.86:0,24,194	0/1:28,0:7:0.76:1,0,48	0/0:23,0:13:19.20:0,19,142	0/1:16,0:15:12.88:41,0,13	0/0:25,0:25:65.54:0,66,580	0/0:17,0:13:28.77:0,29,202	0/0:28,0:28:75.80:0,76,528	0/0:13,0:13:8.24:0,8,37	1/1:17,2:16:9.81:118,10,0	0/1:16,1:15:23.53:56,0,24	0/0:14,0:13:32.69:0,33,225	0/0:12,0:10:17.42:0,17,129	0/0:9,0:8:16.93:0,17,103	0/1:17,1:18:47.60:54,0,48	0/1:18,3:21:21.37:21,0,38	0/0:35,0:32:64.96:0,65,459	0/1:26,1:21:6.40:6,0,85	0/0:29,0:27:77.53:0,78,603	0/0:29,0:29:76.52:0,77,638	0/0:11,0:10:25.77:0,26,158	0/0:18,0:18:44.23:0,44,291	0/0:18,0:17:36.78:0,37,252	0/0:7,0:5:5.37:0,5,34	0/1:16,0:16:0.38:29,0,0	0/0:27,0:25:65.63:0,66,509	0/0:25,0:23:32.33:0,32,326	0/0:21,0:17:40.30:0,40,283
chr10	45794899	.	C	CCACACACACA	10740.66	PASS	AB=0.917;AC=48;AF=0.857;AN=56;BaseQRankSum=2.470;DP=663;FS=0.729;HRun=0;HaplotypeScore=238.2971;InbreedingCoeff=0.2860;MQ=58.37;MQ0=7;MQRankSum=-5.381;QD=18.36;ReadPosRankSum=-2.768;VQSLOD=3.5282;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:33,0:33:7.27:161,7,0	1/1:6,0:6:9.03:243,9,0	0/0:32,0:22:3.01:0,3,89	0/1:26,0:18:24.03:32,0,24	1/1:21,0:20:3.01:67,3,0	1/1:15,0:16:12.04:371,12,0	1/1:29,0:32:11.82:377,12,0	1/1:24,0:27:25.81:248,26,0	1/1:26,0:26:24.55:743,25,0	1/1:18,0:16:27.07:711,27,0	1/1:10,0:12:6.02:265,6,0	1/1:32,0:36:18.04:484,18,0	1/1:25,0:23:27.09:690,27,0	1/1:16,0:15:3.01:114,3,0	1/1:21,6:31:39.10:1557,39,0	1/1:22,4:34:27.09:1197,27,0	0/0:40,0:46:84.26:0,84,2248	1/1:16,1:17:15.01:538,15,0	1/1:19,0:19:25.60:601,26,0	1/1:7,0:7:3.01:67,3,0	0/1:42,0:42:2.98:274,0,3	1/1:20,0:19:3.01:87,3,0	0/1:12,0:12:0:0,0,0	1/1:27,0:26:7.40:224,7,0	1/1:24,3:31:14.97:640,15,0	0/1:11,0:22:99:341,0,192	1/1:15,0:17:15.05:501,15,0	1/1:4,0:4:6.02:207,6,0
chr10	45794928	.	C	CACACACACACACACACAT	4700.09	PASS	AB=0.994;AC=29;AF=0.518;AN=56;BaseQRankSum=5.281;DP=587;FS=6.723;HRun=0;HaplotypeScore=238.5195;InbreedingCoeff=-0.0937;MQ=63.83;MQ0=7;MQRankSum=-1.591;QD=10.76;ReadPosRankSum=0.759;VQSLOD=3.0877;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:20:29.55:402,30,0	0/1:7,0:7:2.80:3,0,85	0/0:27,0:18:47.61:0,48,506	0/0:25,0:19:9.04:0,9,213	0/1:21,0:19:40.54:41,0,117	0/1:14,0:15:73.60:74,0,99	0/1:21,0:21:70.95:71,0,142	0/1:18,0:16:2.25:2,0,245	1/1:20,0:20:35.02:715,35,0	0/1:17,0:16:99:129,0,195	0/1:9,0:9:52.93:83,0,53	1/1:21,0:23:41.05:577,41,0	1/1:20,0:20:44.66:344,45,0	1/1:0,0:17:3.01:186,3,0	0/1:29,0:29:99:267,0,165	0/1:27,0:27:99:148,0,162	0/0:49,0:49:99:0,132,3984	0/1:16,0:16:99:193,0,159	0/0:17,0:16:22:0,22,265	0/1:10,0:10:52.17:52,0,62	0/1:51,0:52:99:117,0,471	1/1:21,0:20:30.20:323,30,0	1/1:13,0:13:26.96:222,27,0	0/0:1,17:27:0.47:0,0,1	0/1:20,0:19:90.22:236,0,90	0/1:23,0:23:99:104,0,383	0/1:14,0:14:99:412,0,129	0/0:4,0:4:5.82:0,6,35
chr10	45800742	.	C	CTGTG	2042.65	PASS	AB=0.970;AC=40;AF=0.741;AN=54;BaseQRankSum=3.064;DP=707;FS=10.451;HRun=0;HaplotypeScore=173.7029;InbreedingCoeff=0.5096;MQ=57.44;MQ0=12;MQRankSum=-3.976;QD=4.07;ReadPosRankSum=0.464;VQSLOD=1.9116;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:47,0:45:3.01:65,3,0	1/1:9,0:9:2.94:18,3,0	0/1:26,0:13:0:0,0,0	./.	1/1:11,0:11:3.01:55,3,0	1/1:12,3:14:3.01:70,3,0	1/1:33,4:41:3.48:71,3,0	1/1:29,0:29:3.98:36,4,0	1/1:22,0:22:0.88:2,1,0	1/1:26,0:26:41.55:672,42,0	0/1:20,0:20:0:0,0,0	1/1:22,0:22:2.99:25,3,0	1/1:24,0:24:14.88:236,15,0	1/1:25,0:25:2.98:24,3,0	1/1:16,0:21:8.96:122,9,0	1/1:25,1:25:10.37:149,10,0	0/0:45,0:46:24.03:0,24,497	1/1:23,0:23:17.32:217,17,0	0/0:27,0:26:6:0,6,71	0/0:15,0:14:14.95:0,15,148	0/0:51,0:54:36:0,36,444	1/1:14,0:14:3.01:50,3,0	1/1:14,0:14:6.02:128,6,0	0/1:31,0:36:0.02:0,0,0	1/1:14,0:14:3:25,3,0	1/1:19,4:24:15.02:227,15,0	0/0:28,0:27:18.04:0,18,244	0/1:9,0:10:2.60:3,0,23
chr10	45806033	.	C	CCTT	177.02	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-3.450;DP=614;FS=2.032;HRun=0;HaplotypeScore=84.8616;InbreedingCoeff=0.9662;MQ=88.83;MQ0=0;MQRankSum=-1.999;QD=44.26;ReadPosRankSum=0.584;VQSLOD=4.8162;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:52:99:0,157,2491	1/1:0,4:4:12.04:263,12,0	0/0:29,0:29:66.21:0,66,1023	0/0:15,0:15:42:0,42,608	0/0:22,0:22:60.18:0,60,918	0/0:9,0:9:27.09:0,27,434	0/0:19,0:19:48.15:0,48,746	0/0:27,0:27:72.25:0,72,1156	0/0:24,0:24:63.21:0,63,1013	0/0:23,0:23:66.23:0,66,1057	0/0:9,0:9:27.08:0,27,410	0/0:28,0:28:81.28:0,81,1300	0/0:15,0:15:45.15:0,45,723	0/0:25,0:25:66.21:0,66,1036	0/0:23,0:23:66.22:0,66,1059	0/0:27,0:27:75.24:0,75,1183	0/0:26,0:26:75.26:0,75,1202	0/0:19,0:19:54.14:0,54,839	0/0:23,0:23:69.23:0,69,1084	0/0:12,0:12:36.12:0,36,579	0/0:39,0:39:99:0,111,1781	0/0:15,0:15:39.13:0,39,625	0/0:14,0:14:42.14:0,42,674	0/0:34,0:34:90.22:0,90,1369	0/0:14,0:14:39.11:0,39,602	0/0:28,0:28:81.25:0,81,1238	0/0:24,0:24:66.22:0,66,1056	0/0:14,0:14:42.14:0,42,675
chr10	45806532	.	TCACACACAGA	T	1276.65	PASS	AB=0.594;AC=3;AF=0.054;AN=56;BaseQRankSum=8.117;DP=663;FS=3.698;HRun=0;HaplotypeScore=189.5878;InbreedingCoeff=0.6297;MQ=74.10;MQ0=6;MQRankSum=0.635;QD=26.60;ReadPosRankSum=-2.047;VQSLOD=2.9320;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:37:96.13:0,96,3507	0/0:12,0:12:15.05:0,15,623	0/0:28,0:17:18.49:0,18,460	0/0:48,0:33:20.74:0,21,1290	0/0:19,0:19:30.06:0,30,1263	0/0:22,0:22:51.15:0,51,2448	0/0:17,0:17:36.10:0,36,1449	1/1:18,11:29:30.03:557,30,0	0/0:17,0:17:45.15:0,45,2237	0/0:20,0:20:42.09:0,42,1693	0/0:15,0:15:36.12:0,36,1508	0/0:27,0:27:66.21:0,66,2986	0/0:17,0:17:42.14:0,42,1913	0/0:20,0:20:51.16:0,51,2379	0/0:23,0:23:54.16:0,54,2358	0/0:38,0:38:96.28:0,96,4147	0/0:39,0:39:99:0,99,4306	0/0:26,0:26:66.21:0,66,2841	0/0:14,0:14:24.06:0,24,892	0/0:21,0:21:39.11:0,39,1687	0/0:32,0:32:69.21:0,69,3027	0/0:10,0:10:24.01:0,24,956	0/0:15,0:15:33.07:0,33,1104	0/0:41,0:41:99:0,108,4466	0/0:24,0:24:23.84:0,24,1611	0/1:6,13:19:96.45:825,0,96	0/0:23,0:23:57.11:0,57,2229	0/0:8,0:8:21.02:0,21,699
chr10	45807886	.	C	CG	1125.04	PASS	AC=14;AF=0.280;AN=50;BaseQRankSum=-4.251;DP=216;FS=3.389;HRun=6;HaplotypeScore=31.2758;InbreedingCoeff=0.6627;MQ=78.32;MQ0=0;MQRankSum=1.032;QD=23.44;ReadPosRankSum=-0.953;VQSLOD=1.9476;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:33.03:0,33,322	0/0:3,0:3:9.01:0,9,85	0/0:4,0:4:3.01:0,3,31	0/0:9,0:9:5.70:0,6,51	1/1:2,3:5:5.98:58,6,0	./.	0/0:28,0:28:72.16:0,72,734	0/0:1,0:1:3.01:0,3,31	0/0:2,0:2:6.01:0,6,61	1/1:2,6:9:18.04:213,18,0	1/1:2,0:2:3:26,3,0	0/0:3,0:3:3:0,3,31	0/0:1,0:1:3.01:0,3,31	0/0:5,0:5:9.02:0,9,92	1/1:0,3:3:9.03:113,9,0	1/1:2,3:5:15.02:164,15,0	0/0:24,0:24:63.13:0,63,642	1/1:0,19:19:48.15:603,48,0	0/0:8,0:8:15.03:0,15,153	./.	0/0:39,0:39:96.19:0,96,970	0/0:2,0:2:6:0,6,55	0/0:1,0:1:3.01:0,3,31	0/0:12,0:12:33.07:0,33,336	1/1:0,5:5:9.03:113,9,0	0/0:8,0:8:21.05:0,21,214	0/0:1,0:1:3.01:0,3,31	./.
chr10	45809559	.	AC	A	2081.31	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.672;DP=733;FS=1.112;HRun=1;HaplotypeScore=69.3099;InbreedingCoeff=0.9994;MQ=94.55;MQ0=0;MQRankSum=-1.584;QD=34.12;ReadPosRankSum=-0.309;VQSLOD=3.2552;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:56:99:0,163,2527	0/0:17,0:17:48.16:0,48,764	0/0:32,0:32:90.28:0,90,1388	0/0:33,0:33:89.74:0,90,1328	0/0:17,0:17:48.15:0,48,741	1/1:0,20:20:54.15:734,54,0	1/1:0,41:41:99:1469,105,0	0/0:37,0:37:99:0,108,1704	0/0:24,0:24:72.25:0,72,1151	0/0:23,0:23:63.21:0,63,985	0/0:15,0:15:45.14:0,45,694	0/0:40,0:40:99:0,120,1915	0/0:26,0:26:78.27:0,78,1246	0/0:20,0:20:60.20:0,60,956	0/0:18,0:18:54.18:0,54,863	0/0:24,0:24:72.25:0,72,1151	0/0:37,0:37:99:0,108,1651	0/0:25,0:25:75.26:0,75,1199	0/0:30,0:30:87.30:0,87,1382	0/0:16,0:16:48.16:0,48,765	0/0:29,0:29:87.30:0,87,1383	0/0:23,0:23:63.20:0,63,982	0/0:12,0:12:36.12:0,36,575	0/0:39,0:39:99:0,117,1787	0/0:19,0:19:57.16:0,57,862	0/0:24,0:23:72.25:0,72,1151	0/0:27,0:27:81.26:0,81,1271	0/0:9,0:9:27.09:0,27,431
chr10	45810615	.	T	TGG	317.05	PASS	AB=0.883;AC=8;AF=0.143;AN=56;BaseQRankSum=-1.140;DP=388;FS=31.304;HRun=0;HaplotypeScore=69.0432;InbreedingCoeff=-0.1938;MQ=45.89;MQ0=18;MQRankSum=3.167;QD=2.86;ReadPosRankSum=0.585;VQSLOD=0.2833;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:29,2:31:60.54:61,0,335	0/0:5,0:5:8.92:0,9,93	0/0:29,0:3:8.82:0,9,91	0/0:24,0:5:7.99:0,8,96	0/0:12,0:11:24.07:0,24,300	0/0:19,0:17:42.13:0,42,520	0/0:9,0:8:14.22:0,14,132	0/0:31,0:31:84.10:0,84,1053	0/1:6,4:10:82.57:83,0,122	0/0:14,0:14:36.09:0,36,435	0/0:10,0:10:27.05:0,27,314	0/1:11,0:11:61.77:62,0,154	0/1:7,2:9:72.97:73,0,114	0/0:8,0:8:21.03:0,21,255	0/0:12,0:12:30.07:0,30,373	0/0:5,0:4:9.03:0,9,124	0/0:17,0:17:42.05:0,42,553	0/0:12,0:11:30.08:0,30,359	0/1:13,0:13:66.54:67,0,162	0/0:6,0:6:11.70:0,12,103	0/1:7,1:9:38.58:39,0,99	0/0:12,0:12:26.56:0,27,243	0/1:8,1:9:28.18:28,0,120	0/1:16,2:17:40.20:40,0,110	0/0:6,0:6:15.05:0,15,191	0/0:15,0:15:45.15:0,45,592	0/0:17,1:18:1.15:0,1,345	0/0:13,0:12:14.78:0,15,158
chr10	45810910	.	GGAA	G	337.91	PASS	AB=0.960;AC=14;AF=0.250;AN=56;BaseQRankSum=2.489;DP=287;FS=12.294;HRun=0;HaplotypeScore=76.1928;InbreedingCoeff=-0.0064;MQ=50.47;MQ0=7;MQRankSum=-5.570;QD=3.04;ReadPosRankSum=-3.488;VQSLOD=-0.2842;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:20,0:20:17.39:17,0,292	0/1:6,0:6:19.37:21,0,19	0/0:11,0:4:11.25:0,11,204	0/0:10,0:3:2.74:0,3,38	0/1:5,0:5:7.20:7,0,53	0/1:12,0:12:24.94:25,0,170	0/0:19,0:19:19.27:0,19,355	0/0:23,0:22:24.75:0,25,1032	0/1:8,0:8:5.96:6,0,106	0/0:13,0:12:6.47:0,6,136	0/0:1,0:1:3.01:0,3,35	0/0:5,0:5:8.26:0,8,99	0/0:6,0:6:12.04:0,12,150	0/0:4,0:4:9.01:0,9,99	0/0:5,0:5:14.25:0,14,90	0/0:7,0:6:3.01:0,3,54	0/0:14,0:14:33.11:0,33,658	0/1:8,0:8:3.79:4,0,55	0/1:6,0:5:10.87:22,0,11	1/1:2,5:5:11.97:116,12,0	0/1:12,1:13:21.26:43,0,21	0/0:6,0:6:11.90:0,12,125	0/0:18,0:18:6.48:0,6,314	0/1:14,0:14:31.64:32,0,200	0/0:7,0:7:5.51:0,6,87	0/0:27,0:27:55.18:0,55,1273	0/1:3,3:4:9.19:68,0,9	1/1:3,3:6:14.81:130,15,0
chr10	45811882	.	G	GT	4660.53	PASS	AB=0.728;AC=47;AF=0.839;AN=56;BaseQRankSum=-5.130;DP=495;FS=31.278;HRun=14;HaplotypeScore=88.6925;InbreedingCoeff=0.0836;MQ=81.46;MQ0=8;MQRankSum=0.657;QD=10.38;ReadPosRankSum=-0.834;VQSLOD=1.7681;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:9,12:22:41.82:352,42,0	1/1:0,9:10:20.81:165,21,0	0/1:52,0:25:5.65:6,0,75	0/0:46,0:31:8.17:0,8,179	1/1:7,14:23:26.18:306,26,0	0/1:5,5:12:8.94:110,0,9	1/1:11,7:20:4.87:139,5,0	1/1:7,9:17:35.63:285,36,0	0/1:2,7:10:4.42:78,0,4	1/1:6,9:16:26.35:187,26,0	0/1:2,6:10:0.45:102,0,0	1/1:4,4:12:4.41:141,4,0	1/1:4,4:8:2.94:48,3,0	1/1:5,8:14:13.57:216,14,0	1/1:4,7:12:20.16:205,20,0	1/1:6,3:10:18.93:137,19,0	0/1:30,6:37:99:112,0,300	1/1:3,10:17:41.36:320,41,0	1/1:6,8:13:10.65:200,11,0	0/1:3,6:10:1.43:102,0,1	1/1:3,6:9:12:105,12,0	1/1:5,6:11:12.81:98,13,0	0/1:8,1:9:20.91:65,0,21	1/1:11,9:20:34.76:314,35,0	1/1:2,12:14:17.90:148,18,0	1/1:7,16:23:41.96:359,42,0	1/1:3,11:16:3.94:174,4,0	1/1:4,12:18:24.15:187,24,0
chr10	45815875	.	G	GT	2350.77	PASS	AB=1.000;AC=23;AF=0.426;AN=54;BaseQRankSum=6.400;DP=312;FS=16.327;HRun=1;HaplotypeScore=55.3983;InbreedingCoeff=0.4938;MQ=64.30;MQ0=2;MQRankSum=0.801;QD=14.69;ReadPosRankSum=6.259;VQSLOD=1.3938;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:7:6.19:0,6,30	0/0:8,0:8:16.82:0,17,91	0/0:25,0:16:29.16:0,29,321	0/0:17,0:12:26.98:0,27,308	1/1:9,16:26:36.19:443,36,0	0/0:21,0:21:59.66:0,60,750	0/0:16,0:16:45.07:0,45,551	0/0:11,0:11:12.86:0,13,98	0/1:8,0:8:17.06:69,0,17	1/1:6,12:18:43.23:467,43,0	1/1:3,11:14:30.37:259,30,0	1/1:12,0:12:23.60:152,24,0	1/1:7,0:7:8.89:59,9,0	0/1:5,0:5:30.69:31,0,42	1/1:3,3:6:4.29:69,4,0	1/1:3,6:9:21.46:218,21,0	0/0:13,0:13:38.55:0,39,446	1/1:6,8:14:26.61:259,27,0	0/0:7,0:7:14.95:0,15,126	0/0:2,0:1:2.99:0,3,23	0/0:15,0:15:2.84:0,3,14	./.	0/1:6,0:6:13.92:14,0,17	0/1:10,0:10:6.46:64,0,6	1/1:2,15:17:42.70:407,43,0	0/1:8,0:8:31.51:32,0,59	0/0:7,0:7:2.83:0,3,24	0/0:1,0:1:2.84:0,3,14
chr10	45815876	.	G	GT	1398.68	PASS	AB=0.833;AC=14;AF=0.259;AN=54;BaseQRankSum=4.566;DP=307;FS=0.000;HRun=0;HaplotypeScore=58.5099;InbreedingCoeff=0.6108;MQ=64.61;MQ0=2;MQRankSum=1.632;QD=12.49;ReadPosRankSum=4.465;VQSLOD=4.0807;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:7:9.27:0,9,58	0/0:8,0:8:16.71:0,17,85	0/0:23,0:14:18.35:0,18,338	0/0:17,0:12:26.24:0,26,305	1/1:11,15:26:0.55:318,1,0	0/0:21,0:21:60.11:0,60,777	0/0:16,0:16:45.07:0,45,584	0/0:8,0:8:7.24:0,7,55	0/0:8,0:8:8.01:0,8,67	1/1:6,12:18:14.97:314,15,0	1/1:3,10:14:10.55:175,11,0	0/0:12,0:12:16.04:0,16,68	0/1:7,0:7:1.72:2,0,10	0/0:5,0:5:10.39:0,10,76	0/1:3,3:6:9.90:71,0,10	1/1:3,6:9:26.21:187,26,0	0/0:13,0:13:39:0,39,465	1/1:6,8:14:16.16:189,16,0	0/0:5,0:5:11.94:0,12,108	0/0:2,0:1:3:0,3,25	0/0:16,0:16:5.90:0,6,40	./.	0/0:6,0:6:5.37:0,5,34	0/0:10,0:10:15.56:0,16,87	1/1:3,15:18:27.50:310,28,0	0/0:8,0:8:7.55:0,8,84	0/0:7,0:7:3:0,3,25	0/0:1,0:1:2.88:0,3,15
chr10	45816249	.	T	TGACGATGTGGCTACGGGGGA	24115.72	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-0.385;DP=483;FS=66.741;HRun=0;HaplotypeScore=246.7619;InbreedingCoeff=0.9946;MQ=84.61;MQ0=1;MQRankSum=-12.725;QD=149.79;ReadPosRankSum=-1.882;VQSLOD=2.1248;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,7:20:36.12:2837,36,0	0/0:12,0:12:33.11:0,33,1704	0/0:25,0:25:75.24:0,75,2842	0/0:25,0:24:63.22:0,63,2723	0/0:24,0:23:54.19:0,54,2981	0/0:23,0:23:57.20:0,57,2946	0/0:32,0:32:81.28:0,81,4350	0/0:18,0:18:45.15:0,45,2144	1/1:3,2:6:18.06:1011,18,0	0/0:16,0:16:48.16:0,48,2447	0/0:19,0:19:48.16:0,48,2795	1/1:6,5:12:33.11:2246,33,0	1/1:11,5:16:42.14:2459,42,0	1/1:7,3:10:30.10:2223,30,0	0/0:18,0:18:54.18:0,54,2746	0/0:26,0:26:66.23:0,66,3462	0/0:20,0:20:57.20:0,57,3180	0/0:25,0:24:72.25:0,72,3534	1/1:10,2:20:48.14:2889,48,0	1/1:7,3:12:19.62:1044,20,0	1/1:10,0:10:21.06:1028,21,0	1/1:6,3:9:24.07:1263,24,0	1/1:5,4:10:17.64:847,18,0	1/1:7,7:15:30.10:2409,30,0	0/0:17,0:17:48.16:0,48,2521	0/0:22,0:22:63.18:0,63,3205	1/1:6,5:12:29.73:2609,30,0	1/1:5,2:8:18.06:1251,18,0
chr10	45816318	.	CA	C	6454.23	PASS	AB=0.714;AC=53;AF=0.946;AN=56;BaseQRankSum=-3.361;DP=423;FS=1.191;HRun=2;HaplotypeScore=149.1656;InbreedingCoeff=-0.0059;MQ=71.54;MQ0=4;MQRankSum=-1.823;QD=15.26;ReadPosRankSum=3.667;VQSLOD=4.9578;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,15:17:5.18:76,5,0	1/1:0,6:6:15.05:195,15,0	0/1:20,8:17:93.24:256,0,93	0/1:32,8:19:99:212,0,134	1/1:0,15:13:3:39,3,0	1/1:0,20:20:5.68:75,6,0	1/1:1,20:21:21.06:272,21,0	1/1:0,35:35:99:1327,102,0	1/1:0,10:10:6.01:77,6,0	1/1:0,8:8:24.08:311,24,0	1/1:0,8:8:2.98:39,3,0	1/1:1,14:14:12:142,12,0	1/1:1,14:14:21.07:265,21,0	1/1:1,9:10:3.01:38,3,0	1/1:0,21:21:24.06:313,24,0	1/1:0,16:16:24.07:311,24,0	1/1:0,11:11:22.19:302,22,0	1/1:1,12:11:21.07:272,21,0	1/1:1,11:12:30.10:389,30,0	1/1:0,9:9:2.99:39,3,0	1/1:0,4:3:3.01:39,3,0	1/1:1,10:11:3.01:39,3,0	0/1:1,11:12:0.01:0,0,0	1/1:1,10:10:2.57:38,3,0	1/1:1,10:11:12.03:143,12,0	1/1:1,20:21:60.20:778,60,0	1/1:5,7:12:12.04:155,12,0	1/1:1,8:9:24.08:311,24,0
chr10	45816327	.	CTGTTTCT	C	4206.83	PASS	AB=0.954;AC=44;AF=0.815;AN=54;BaseQRankSum=0.643;DP=424;FS=0.860;HRun=0;HaplotypeScore=170.0917;InbreedingCoeff=0.2560;MQ=64.45;MQ0=8;MQRankSum=-1.392;QD=11.69;ReadPosRankSum=4.359;VQSLOD=2.7743;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:12,3:15:5.86:133,6,0	1/1:6,0:6:9.01:150,9,0	0/0:41,0:16:33.56:0,34,629	0/1:57,0:21:9.72:10,0,694	1/1:12,2:12:2.76:30,3,0	1/1:13,6:19:5.91:92,6,0	1/1:14,4:19:18.35:347,18,0	0/1:33,0:32:51.78:265,0,52	1/1:8,2:10:5.94:108,6,0	1/1:6,2:8:23.95:414,24,0	0/0:5,2:7:0:0,0,0	1/1:12,3:14:11.67:192,12,0	1/1:13,1:13:18.06:328,18,0	1/1:7,2:9:2.94:36,3,0	1/1:17,2:19:17.90:222,18,0	1/1:14,0:14:18.04:258,18,0	0/1:11,0:11:13.83:32,0,14	1/1:8,4:10:21.05:327,21,0	1/1:7,2:9:18.05:290,18,0	1/1:5,2:7:2.65:15,3,0	./.	0/1:8,2:10:0:0,0,0	0/0:9,3:12:0:0,0,0	1/1:7,3:9:3.01:64,3,0	1/1:10,0:10:8.87:160,9,0	1/1:22,0:21:13.86:232,14,0	1/1:6,1:7:12.03:194,12,0	1/1:9,0:9:18.06:310,18,0
chr10	45816333	.	CT	C	3475.75	PASS	AB=0.806;AC=43;AF=0.796;AN=54;BaseQRankSum=-0.028;DP=412;FS=2.049;HRun=3;HaplotypeScore=142.9766;InbreedingCoeff=0.5034;MQ=56.20;MQ0=11;MQRankSum=-0.644;QD=10.25;ReadPosRankSum=3.236;VQSLOD=1.7168;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,8:15:5.91:70,6,0	1/1:2,2:4:6.02:73,6,0	0/0:45,0:11:29.98:0,30,333	0/1:75,0:20:0.16:0,0,369	0/1:7,7:12:0.04:0,0,0	1/1:9,9:18:2.95:30,3,0	1/1:8,11:19:17.96:186,18,0	1/1:9,18:26:59.33:675,59,0	1/1:4,5:9:5.97:76,6,0	1/1:5,3:8:21.05:241,21,0	0/0:4,3:7:0:0,0,0	1/1:7,6:12:11.82:150,12,0	1/1:6,6:11:14.88:158,15,0	1/1:3,5:8:2.98:38,3,0	1/1:10,7:17:8.92:107,9,0	1/1:7,4:11:9.02:112,9,0	1/1:5,5:10:13.13:159,13,0	1/1:9,2:10:21.04:229,21,0	1/1:6,2:8:18.04:198,18,0	0/0:3,4:7:2.97:0,3,20	./.	0/1:6,3:9:0:0,0,0	0/0:6,6:12:0:0,0,0	1/1:6,4:9:3.01:38,3,0	1/1:3,6:9:5.97:63,6,0	1/1:10,9:18:45.10:502,45,0	1/1:2,4:6:12.04:150,12,0	1/1:1,6:7:18.06:223,18,0
chr10	45816334	.	T	TC	4321.20	PASS	AB=0.889;AC=42;AF=0.778;AN=54;BaseQRankSum=0.000;DP=477;FS=2.061;HRun=1;HaplotypeScore=164.5846;InbreedingCoeff=0.5066;MQ=52.65;MQ0=13;MQRankSum=-0.290;QD=11.62;ReadPosRankSum=1.883;VQSLOD=3.5583;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,4:19:5.88:74,6,0	1/1:2,0:2:6.02:81,6,0	0/0:46,0:11:29.82:0,30,304	0/1:80,0:21:0.06:0,0,352	0/0:15,3:14:0:0,0,0	1/1:16,3:19:2.92:30,3,0	1/1:17,3:20:14.84:235,15,0	1/1:23,5:26:69.10:864,69,0	1/1:14,2:13:5.72:76,6,0	1/1:9,1:9:26.29:301,26,0	0/0:9,2:11:0:0,0,0	1/1:11,3:12:11.82:151,12,0	1/1:10,3:13:15.05:196,15,0	1/1:7,1:8:2.98:38,3,0	1/1:10,7:17:8.93:136,9,0	1/1:9,5:13:9.03:121,9,0	1/1:8,5:13:18.47:236,18,0	1/1:7,5:10:21.07:296,21,0	1/1:7,4:11:23.75:303,24,0	0/0:12,0:11:2.97:0,3,20	./.	0/1:10,4:13:0:0,0,0	0/0:12,3:14:0:0,0,1	1/1:11,2:11:3.01:38,3,0	1/1:8,2:10:5.92:63,6,0	1/1:17,7:21:56.29:654,56,0	1/1:5,1:6:11.99:150,12,0	1/1:8,1:9:23.86:279,24,0
chr10	45816348	.	CT	C	2555.22	PASS	AB=0.737;AC=41;AF=0.759;AN=54;BaseQRankSum=1.933;DP=526;FS=2.184;HRun=2;HaplotypeScore=151.1396;InbreedingCoeff=0.4728;MQ=42.90;MQ0=31;MQRankSum=0.140;QD=9.83;ReadPosRankSum=1.452;VQSLOD=1.7638;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,13:16:2.91:34,3,0	1/1:0,3:3:5.50:45,6,0	0/0:81,0:10:15.76:0,16,245	0/0:125,0:18:31.08:0,31,323	0/0:10,6:13:0:0,0,1	0/0:3,13:16:0:0,0,0	1/1:5,12:17:1.60:75,2,0	1/1:12,7:17:33.72:304,34,0	1/1:4,11:12:2.96:38,3,0	1/1:3,6:8:18.05:211,18,0	0/0:5,8:12:0:0,0,1	1/1:4,9:11:6.27:77,6,0	1/1:4,6:10:10.33:89,10,0	1/1:2,4:6:0.44:1,0,0	1/1:9,9:18:8.92:106,9,0	1/1:7,13:19:9.80:92,10,0	1/1:6,8:14:19.15:232,19,0	1/1:4,6:8:18.03:188,18,0	1/1:4,4:8:17.50:165,17,0	0/0:6,8:13:0.46:0,0,1	./.	0/1:9,5:13:0:0,0,0	1/1:6,6:11:2.90:38,3,0	1/1:2,10:10:3.01:38,3,0	1/1:4,4:8:2.98:38,3,0	1/1:9,17:23:65.03:717,65,0	1/1:0,3:3:3.01:38,3,0	1/1:1,6:7:12.04:149,12,0
chr10	45816349	.	T	TC	3060.57	PASS	AB=0.833;AC=39;AF=0.750;AN=52;BaseQRankSum=2.228;DP=486;FS=1.054;HRun=1;HaplotypeScore=137.8806;InbreedingCoeff=0.4905;MQ=42.28;MQ0=32;MQRankSum=0.062;QD=14.04;ReadPosRankSum=1.692;VQSLOD=3.2740;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,1:14:2.87:34,3,0	1/1:6,0:6:11.58:89,12,0	0/0:83,0:10:15.78:0,16,252	0/0:124,0:17:30.49:0,30,301	0/0:9,3:10:0.01:0,0,0	0/0:13,3:16:0:0,0,0	1/1:13,2:15:1.58:130,2,0	1/1:7,4:9:24.08:328,24,0	1/1:11,3:12:3.84:40,4,0	1/1:7,2:8:20.43:261,20,0	0/0:9,2:10:0:0,0,0	1/1:9,2:9:5.80:77,6,0	1/1:6,2:8:7.84:85,8,0	0/1:4,1:5:0:0,0,0	1/1:9,5:14:8.98:136,9,0	1/1:13,5:17:9.87:102,10,0	1/1:8,5:13:21.83:305,22,0	1/1:7,3:8:21.07:307,21,0	1/1:4,1:5:12.04:170,12,0	0/0:8,3:10:0.47:0,0,1	./.	./.	1/1:7,1:7:2.98:38,3,0	1/1:10,2:10:3.01:38,3,0	1/1:4,1:5:3.01:39,3,0	1/1:20,7:24:62.47:789,62,0	1/1:4,0:4:4.99:44,5,0	1/1:7,1:8:14.41:170,14,0
chr10	45816357	.	CT	C	2116.56	PASS	AB=0.667;AC=39;AF=0.750;AN=52;BaseQRankSum=3.375;DP=480;FS=15.813;HRun=2;HaplotypeScore=119.1275;InbreedingCoeff=0.5154;MQ=32.85;MQ0=38;MQRankSum=1.392;QD=10.48;ReadPosRankSum=1.851;VQSLOD=0.6234;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:2,6:8:0:0,0,0	1/1:3,3:6:16.29:180,16,0	0/0:97,0:6:10.26:0,10,109	0/0:134,3:12:17.77:0,18,142	0/1:6,6:10:0.17:0,0,1	0/0:4,10:14:0:0,0,0	1/1:5,9:14:8.11:48,8,0	1/1:6,4:8:17.67:156,18,0	1/1:4,10:11:8.76:89,9,0	1/1:2,6:7:18.04:204,18,0	0/0:4,5:8:0:0,0,0	1/1:3,6:7:6.02:76,6,0	1/1:4,3:7:3.90:39,4,0	0/0:0,3:3:0:0,0,0	1/1:3,8:11:8.34:78,8,0	1/1:5,12:16:14.44:141,14,0	1/1:4,9:13:23.80:246,24,0	1/1:7,3:8:16.92:129,17,0	1/1:3,3:5:11.25:118,11,0	1/1:4,7:10:1.61:6,2,0	./.	./.	1/1:1,5:5:3.01:38,3,0	1/1:5,7:10:3.01:38,3,0	1/1:2,1:3:0.89:2,1,0	1/1:11,14:22:49.64:519,50,0	1/1:1,2:3:3.01:37,3,0	1/1:1,4:5:11.45:89,11,0
chr10	45816358	.	T	TC	2531.43	PASS	AB=1.000;AC=39;AF=0.813;AN=48;BaseQRankSum=3.309;DP=459;FS=9.633;HRun=1;HaplotypeScore=113.4957;InbreedingCoeff=0.4971;MQ=33.10;MQ0=39;MQRankSum=1.616;QD=13.91;ReadPosRankSum=2.493;VQSLOD=2.3708;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	1/1:3,3:6:16.60:193,17,0	0/0:100,0:6:9.89:0,10,103	0/0:135,2:13:17.77:0,18,136	0/0:7,6:11:0.01:0,0,0	1/1:14,0:14:2.90:19,3,0	1/1:14,1:15:11.85:101,12,0	1/1:4,3:5:15.01:193,15,0	1/1:10,2:9:8.92:96,9,0	1/1:7,2:8:20.65:258,21,0	0/0:5,1:5:0:0,0,0	1/1:6,1:5:6.02:77,6,0	1/1:4,1:5:3.01:37,3,0	0/1:4,0:4:0:0,0,0	1/1:8,2:10:8.34:98,8,0	1/1:15,4:18:16.07:155,16,0	1/1:9,3:12:22.05:284,22,0	1/1:3,4:5:14.54:197,15,0	1/1:4,1:4:9.03:126,9,0	1/1:7,1:8:1.55:6,2,0	./.	./.	1/1:7,0:6:3.01:37,3,0	1/1:7,2:7:3.01:38,3,0	./.	1/1:14,5:16:45.11:606,45,0	1/1:2,1:3:2.96:41,3,0	1/1:4,0:4:9.23:86,9,0
chr10	45816370	.	CT	C	1470.73	PASS	AB=0.873;AC=30;AF=0.750;AN=40;BaseQRankSum=3.583;DP=428;FS=3.173;HRun=2;HaplotypeScore=101.9747;InbreedingCoeff=0.3565;MQ=22.59;MQ0=44;MQRankSum=-2.114;QD=11.23;ReadPosRankSum=0.871;VQSLOD=2.0453;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	1/1:2,3:5:12.03:141,12,0	0/0:111,0:8:10.67:0,11,177	0/0:141,0:9:12.04:0,12,154	0/1:5,4:8:0.17:0,0,1	./.	./.	0/1:6,0:5:17.27:22,0,17	0/1:6,2:6:6.45:28,0,6	1/1:6,2:8:17.47:167,17,0	0/0:4,2:5:0:0,0,0	0/1:4,0:3:0:0,0,0	./.	1/1:0,3:3:3.01:33,3,0	1/1:4,7:11:8.91:88,9,0	1/1:4,15:18:15.39:150,15,0	1/1:5,7:12:27.67:274,28,0	1/1:3,3:5:14.94:137,15,0	1/1:2,0:1:1.82:5,2,0	1/1:3,5:8:2.30:36,2,0	./.	./.	1/1:1,5:6:2.74:12,3,0	./.	./.	1/1:6,12:15:40.55:427,41,0	1/1:1,2:3:3.01:36,3,0	1/1:1,2:3:3.01:30,3,0
chr10	45816371	.	T	TC	1630.17	PASS	AB=1.000;AC=25;AF=0.694;AN=36;BaseQRankSum=4.007;DP=375;FS=5.641;HRun=1;HaplotypeScore=98.8589;InbreedingCoeff=0.4622;MQ=25.50;MQ0=43;MQRankSum=-1.369;QD=20.13;ReadPosRankSum=1.944;VQSLOD=3.8771;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	1/1:3,1:4:12.04:167,12,0	0/0:112,0:8:10.07:0,10,175	0/0:143,0:10:11.77:0,12,151	0/0:4,4:7:0.01:0,0,0	./.	./.	0/0:2,1:2:2.94:0,3,18	0/1:2,0:2:4.90:37,0,5	1/1:2,3:5:15.05:203,15,0	0/0:4,0:3:0:0,0,0	./.	./.	1/1:3,0:3:3.01:33,3,0	1/1:7,1:8:8.91:99,9,0	1/1:15,2:16:15.48:195,15,0	1/1:7,2:9:21.95:273,22,0	1/1:3,1:3:9.03:129,9,0	./.	1/1:6,0:6:2.50:39,3,0	./.	./.	1/1:6,0:6:3:28,3,0	./.	./.	1/1:12,1:11:33.11:457,33,0	1/1:2,0:2:3.01:41,3,0	1/1:2,0:2:3.01:47,3,0
chr10	45816375	.	CT	C	1236.44	PASS	AB=0.558;AC=24;AF=0.706;AN=34;BaseQRankSum=4.443;DP=361;FS=3.682;HRun=2;HaplotypeScore=99.1234;InbreedingCoeff=0.4668;MQ=31.99;MQ0=42;MQRankSum=-1.528;QD=15.08;ReadPosRankSum=2.825;VQSLOD=3.7949;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	1/1:0,4:4:12.03:141,12,0	0/0:106,0:8:17.27:0,17,222	0/0:140,0:10:12.03:0,12,160	0/1:3,5:7:0.17:0,0,1	./.	./.	0/0:2,0:1:3.01:0,3,34	0/1:0,2:2:8.78:28,0,9	1/1:2,3:5:12:124,12,0	0/0:0,2:2:0:0,0,0	./.	./.	1/1:0,3:3:3.01:33,3,0	1/1:1,7:8:5.93:56,6,0	1/1:4,13:16:20.18:175,20,0	1/1:1,8:9:21.53:239,22,0	1/1:1,3:3:6.90:69,7,0	./.	1/1:1,4:5:2.72:37,3,0	./.	./.	./.	./.	./.	1/1:0,13:11:33.10:387,33,0	1/1:0,2:2:3.01:36,3,0	1/1:0,2:2:3.01:30,3,0
chr10	45816376	.	T	TC	1797.19	PASS	AB=1.000;AC=29;AF=0.725;AN=40;BaseQRankSum=4.028;DP=380;FS=5.464;HRun=1;HaplotypeScore=108.6894;InbreedingCoeff=0.3876;MQ=32.11;MQ0=40;MQRankSum=-1.506;QD=18.15;ReadPosRankSum=1.128;VQSLOD=3.8932;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	1/1:6,0:6:15.66:178,16,0	0/0:105,0:8:16.63:0,17,212	0/0:138,0:10:14.69:0,15,167	0/0:6,1:7:0.01:0,0,0	./.	1/1:7,1:8:0.47:1,0,0	0/1:9,0:9:10.97:172,0,11	0/1:2,0:2:6.78:37,0,7	1/1:4,0:4:12.04:154,12,0	0/0:4,0:4:0:0,0,0	0/1:2,0:2:0:0,0,0	1/1:2,0:2:0.89:2,1,0	1/1:4,0:4:3.01:36,3,0	1/1:7,0:7:5.97:93,6,0	1/1:16,1:17:23.99:281,24,0	1/1:9,1:10:21.95:272,22,0	1/1:3,0:2:6.02:72,6,0	./.	1/1:4,0:4:2.71:39,3,0	./.	./.	./.	./.	./.	1/1:13,0:11:33.11:455,33,0	1/1:3,0:3:5.69:52,6,0	1/1:5,0:5:3.82:70,4,0
chr10	45816382	.	CT	C	638.45	PASS	AB=0.769;AC=34;AF=0.850;AN=40;BaseQRankSum=5.066;DP=363;FS=7.094;HRun=2;HaplotypeScore=113.0534;InbreedingCoeff=0.3314;MQ=46.48;MQ0=39;MQRankSum=-1.777;QD=2.74;ReadPosRankSum=2.555;VQSLOD=-0.0770;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	1/1:1,4:6:13.52:54,14,0	0/0:99,0:11:26.48:0,26,305	0/1:127,0:15:2.67:3,0,128	0/1:1,4:7:0.17:0,0,1	./.	1/1:1,6:8:2.88:16,3,0	1/1:6,2:8:22.60:122,23,0	1/1:0,1:2:1.56:14,2,0	1/1:1,3:4:11.64:68,12,0	0/0:0,2:4:0:0,0,0	1/1:1,1:2:2.72:13,3,0	1/1:0,1:2:2.74:12,3,0	1/1:2,1:4:2.80:13,3,0	1/1:1,0:7:3.11:9,3,0	1/1:4,6:17:22.10:83,22,0	1/1:1,5:10:19.36:84,19,0	1/1:0,2:2:3.40:18,3,0	./.	1/1:0,1:4:2.51:13,3,0	./.	./.	./.	./.	./.	1/1:3,4:11:30.35:171,30,0	1/1:0,2:3:5.78:31,6,0	1/1:3,1:5:1.27:20,1,0
chr10	45816383	.	T	TC	1112.65	PASS	AB=0.992;AC=33;AF=0.825;AN=40;BaseQRankSum=5.035;DP=353;FS=7.758;HRun=1;HaplotypeScore=107.4022;InbreedingCoeff=0.3451;MQ=49.10;MQ0=36;MQRankSum=-1.318;QD=5.15;ReadPosRankSum=2.733;VQSLOD=0.5031;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	1/1:5,1:6:17.01:104,17,0	0/0:98,1:12:26.13:0,26,299	0/1:124,0:16:3.94:4,0,128	0/0:6,1:7:0.01:0,0,0	./.	1/1:7,1:8:2.92:18,3,0	1/1:2,6:8:23.98:225,24,0	1/1:2,0:2:4.94:22,5,0	1/1:3,1:4:11.99:106,12,0	0/0:4,0:4:0:0,0,0	1/1:1,1:2:3.27:14,3,0	1/1:2,0:2:2.94:18,3,0	1/1:2,1:3:2.97:20,3,0	1/1:6,0:6:5.63:30,6,0	1/1:13,3:16:26.32:174,26,0	1/1:9,0:9:21.17:118,21,0	1/1:3,0:2:4.53:26,5,0	./.	1/1:4,0:4:2.63:17,3,0	./.	./.	./.	./.	./.	1/1:10,0:10:29.86:228,30,0	1/1:3,0:3:5.94:41,6,0	1/1:2,3:5:3.81:54,4,0
chr10	45816386	.	T	TC	1491.22	PASS	AB=0.992;AC=40;AF=0.870;AN=46;BaseQRankSum=3.724;DP=378;FS=6.607;HRun=1;HaplotypeScore=113.6920;InbreedingCoeff=0.2426;MQ=49.00;MQ0=31;MQRankSum=-2.290;QD=5.83;ReadPosRankSum=1.793;VQSLOD=0.6029;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	1/1:5,1:6:17.03:104,17,0	0/0:94,0:13:32.53:0,33,361	0/1:115,0:16:9.02:9,0,100	1/1:8,1:9:2.28:10,2,0	0/0:7,0:7:0.88:0,1,2	1/1:8,1:9:2.96:19,3,0	1/1:4,5:9:25.56:235,26,0	1/1:2,0:2:4.72:21,5,0	1/1:6,1:7:21:206,21,0	1/1:7,0:7:2.31:10,2,0	1/1:1,1:2:3.48:43,3,0	1/1:4,0:4:4.51:23,5,0	1/1:2,1:3:2.97:20,3,0	0/1:11,0:11:1.26:14,0,1	1/1:17,1:18:26.43:178,26,0	1/1:10,0:10:25.46:154,25,0	1/1:4,0:3:4.22:25,4,0	1/1:3,0:2:6.02:82,6,0	1/1:5,0:5:2.63:17,3,0	./.	1/1:7,0:7:2.22:7,2,0	./.	./.	./.	1/1:14,0:14:41.66:323,42,0	1/1:3,0:3:5.97:44,6,0	1/1:3,2:5:5.96:58,6,0
chr10	45816398	.	CT	C	3184.17	PASS	AB=0.969;AC=46;AF=0.958;AN=48;BaseQRankSum=1.638;DP=374;FS=3.049;HRun=2;HaplotypeScore=125.1100;InbreedingCoeff=-0.0017;MQ=70.31;MQ0=14;MQRankSum=-6.904;QD=9.15;ReadPosRankSum=3.455;VQSLOD=1.7004;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	1/1:2,6:8:21.01:220,21,0	0/1:55,3:18:79.65:80,0,291	0/1:74,1:22:2.91:3,0,204	1/1:3,8:11:5.43:33,5,0	1/1:2,6:8:3.01:34,3,0	1/1:1,9:10:2.95:21,3,0	1/1:5,12:16:47.88:507,48,0	1/1:1,3:4:11.76:106,12,0	1/1:5,7:12:35.74:365,36,0	1/1:4,7:11:5.84:49,6,0	1/1:1,2:3:2.93:33,3,0	1/1:3,5:8:15.04:171,15,0	1/1:1,2:3:3.01:34,3,0	1/1:7,9:16:6:60,6,0	1/1:3,17:20:32.03:315,32,0	1/1:2,10:12:23.44:215,23,0	1/1:2,3:4:3.01:37,3,0	1/1:5,2:6:11.44:94,11,0	1/1:2,5:7:6.02:73,6,0	./.	1/1:2,7:9:5.50:43,6,0	1/1:3,10:13:3.01:37,3,0	./.	./.	1/1:6,12:17:47.13:483,47,0	1/1:2,3:5:6.02:69,6,0	1/1:4,4:8:18.03:200,18,0
chr10	45816399	.	T	TC	4283.53	PASS	AB=0.970;AC=46;AF=0.958;AN=48;BaseQRankSum=0.503;DP=382;FS=1.810;HRun=1;HaplotypeScore=127.3829;InbreedingCoeff=-0.1224;MQ=70.15;MQ0=11;MQRankSum=-6.590;QD=12.20;ReadPosRankSum=3.170;VQSLOD=3.7192;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	1/1:7,0:8:21.07:280,21,0	0/1:52,0:18:31.02:31,0,303	0/1:65,1:22:43.84:44,0,178	1/1:10,1:11:5.83:70,6,0	1/1:6,2:8:3.01:34,3,0	1/1:12,1:13:2.98:22,3,0	1/1:14,3:16:48.15:609,48,0	1/1:6,0:6:14.90:126,15,0	1/1:8,4:12:36.11:484,36,0	1/1:10,2:12:6.01:73,6,0	1/1:3,0:3:3.48:40,3,0	1/1:7,1:8:15.04:173,15,0	1/1:3,1:4:3.01:36,3,0	1/1:12,4:16:6.02:80,6,0	1/1:18,3:21:32.50:430,32,0	1/1:11,1:12:24.07:309,24,0	1/1:4,1:4:3.48:42,3,0	1/1:4,3:6:12.04:166,12,0	1/1:7,1:8:6.02:77,6,0	./.	1/1:9,0:9:6.02:77,6,0	1/1:12,2:14:3.01:37,3,0	./.	./.	1/1:17,4:20:57.07:732,57,0	1/1:5,0:5:6.02:81,6,0	1/1:5,2:8:18.06:231,18,0
chr10	45816402	.	GT	G	2111.67	PASS	AB=0.949;AC=54;AF=0.964;AN=56;BaseQRankSum=1.374;DP=379;FS=3.500;HRun=1;HaplotypeScore=136.3857;InbreedingCoeff=-0.0665;MQ=72.72;MQ0=9;MQRankSum=-5.610;QD=5.57;ReadPosRankSum=1.951;VQSLOD=0.7727;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,0:7:2.88:15,3,0	1/1:8,0:8:20.37:119,20,0	0/1:35,3:18:52.80:53,0,54	0/1:53,1:23:13.11:13,0,211	1/1:11,0:11:5.06:22,5,0	1/1:9,0:9:5.76:31,6,0	1/1:15,1:16:14.38:81,14,0	1/1:18,0:17:46.54:269,47,0	1/1:8,0:8:9.95:86,10,0	1/1:13,0:13:37.50:208,37,0	1/1:13,0:13:5.37:28,5,0	1/1:3,0:3:2.85:17,3,0	1/1:9,0:8:14.58:85,15,0	1/1:5,0:5:8.54:44,9,0	1/1:16,0:16:5.70:30,6,0	1/1:21,0:21:35.03:204,35,0	1/1:11,1:12:23.31:144,23,0	1/1:6,0:5:5.85:36,6,0	1/1:8,0:7:14.21:76,14,0	1/1:7,1:8:5.75:32,6,0	1/1:8,0:8:2.84:14,3,0	1/1:9,1:10:8.69:48,9,0	1/1:14,0:14:5.67:28,6,0	1/1:11,0:10:5.75:30,6,0	1/1:12,0:11:2.84:14,3,0	1/1:21,0:20:55.84:340,56,0	1/1:5,0:5:5.89:41,6,0	1/1:7,1:8:17.60:106,18,0
chr10	45816403	.	TG	T	5373.79	PASS	AB=0.846;AC=54;AF=0.964;AN=56;BaseQRankSum=-0.431;DP=381;FS=3.484;HRun=2;HaplotypeScore=126.3327;InbreedingCoeff=-0.1009;MQ=73.96;MQ0=9;MQRankSum=-5.919;QD=14.10;ReadPosRankSum=1.066;VQSLOD=4.5257;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,4:8:3.01:39,3,0	1/1:1,7:8:21.06:253,21,0	0/1:26,11:19:21.73:359,0,22	0/1:51,4:23:99:100,0,121	1/1:2,9:11:5.99:63,6,0	1/1:1,8:9:6.02:74,6,0	1/1:1,15:16:17.95:195,18,0	1/1:0,18:17:51.12:623,51,0	1/1:0,8:8:17.73:199,18,0	1/1:2,11:13:39.12:481,39,0	1/1:3,11:14:12.01:126,12,0	1/1:1,2:3:2.94:35,3,0	1/1:4,6:9:15.04:174,15,0	1/1:1,4:5:9.03:112,9,0	1/1:3,14:17:9.01:96,9,0	1/1:0,21:21:36.11:425,36,0	1/1:2,10:12:23.98:269,24,0	1/1:2,5:6:6.02:77,6,0	1/1:4,5:8:18.06:226,18,0	1/1:2,6:8:6.02:76,6,0	1/1:0,8:8:3.01:39,3,0	1/1:3,7:10:9.03:108,9,0	1/1:1,13:14:6.02:77,6,0	1/1:5,6:10:6.02:78,6,0	1/1:0,12:11:3.01:39,3,0	1/1:1,20:20:57.18:715,57,0	1/1:1,4:5:8.99:94,9,0	1/1:1,7:8:18.06:221,18,0
chr10	45818032	.	AT	A	2231.07	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=8.751;DP=250;FS=5.086;HRun=6;HaplotypeScore=27.8300;InbreedingCoeff=0.8183;MQ=76.23;MQ0=0;MQRankSum=1.036;QD=23.99;ReadPosRankSum=4.309;VQSLOD=2.3120;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,25:26:69.17:741,69,0	0/0:4,0:4:9.02:0,9,104	0/0:6,0:6:6.69:0,7,43	0/0:8,0:5:2.69:0,3,8	0/0:9,0:9:27.08:0,27,341	0/0:12,0:12:27.09:0,27,355	0/0:7,0:7:15.05:0,15,197	0/0:36,0:36:84.25:0,84,1064	1/1:0,5:5:12.03:129,12,0	0/0:4,0:4:12.04:0,12,158	0/0:3,0:3:6.02:0,6,79	1/1:0,5:5:12.03:129,12,0	1/1:0,4:4:9.02:97,9,0	1/1:0,2:2:6.02:64,6,0	0/0:6,0:6:15.04:0,15,185	0/0:3,0:3:6.02:0,6,77	0/0:28,0:28:75.14:0,75,917	0/0:20,0:20:60.12:0,60,734	1/1:1,12:13:36.07:378,36,0	1/1:0,3:3:9.02:97,9,0	1/1:0,12:12:30.08:322,30,0	1/1:1,1:2:3.01:32,3,0	1/1:0,4:4:8.65:96,9,0	1/1:0,2:2:6.02:64,6,0	0/0:5,0:5:12:0,12,138	0/0:4,0:4:12.04:0,12,158	1/1:4,7:11:15.03:161,15,0	1/1:0,4:4:12.03:129,12,0
chr10	45818208	.	CATAT	C	2909.90	PASS	AC=18;AF=0.333;AN=54;BaseQRankSum=-4.961;DP=294;FS=0.000;HRun=0;HaplotypeScore=73.8055;InbreedingCoeff=0.7745;MQ=64.58;MQ0=5;MQRankSum=-1.596;QD=24.45;ReadPosRankSum=-0.895;VQSLOD=3.2016;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:6:0,6,52	0/0:2,0:2:6.02:0,6,143	0/0:22,0:7:6.58:0,7,34	0/0:25,0:11:15.67:0,16,191	1/1:13,0:13:18.06:256,18,0	0/0:9,0:9:24.07:0,24,376	0/0:1,0:1:3.01:0,3,49	1/1:13,30:43:93.06:1405,93,0	0/0:4,0:4:8.04:0,8,60	1/1:10,0:10:23.54:301,24,0	1/1:9,0:9:18.06:264,18,0	0/0:5,0:5:9:0,9,79	0/0:2,0:2:6:0,6,53	0/0:9,0:9:17.99:0,18,155	1/1:4,0:4:3.01:45,3,0	1/1:2,0:2:6.02:89,6,0	0/0:20,0:20:51.40:0,51,811	1/1:24,0:24:18.06:269,18,0	0/0:15,0:14:14.63:0,15,206	0/0:10,0:10:12.04:0,12,230	0/0:6,0:6:9.03:0,9,153	./.	0/0:5,0:5:9.01:0,9,101	0/0:4,0:4:2.99:0,3,23	1/1:7,0:7:18.06:267,18,0	1/1:1,6:7:12.04:205,12,0	0/0:10,0:10:14.23:0,14,167	0/0:11,0:11:12.04:0,12,217
chr10	45818217	.	ATATATT	A	3002.24	PASS	AB=1.000;AC=20;AF=0.370;AN=54;BaseQRankSum=-4.724;DP=273;FS=2.890;HRun=0;HaplotypeScore=78.8084;InbreedingCoeff=0.5167;MQ=70.45;MQ0=5;MQRankSum=-2.513;QD=22.92;ReadPosRankSum=0.939;VQSLOD=3.0943;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:6.02:0,6,67	0/1:3,0:3:14.11:14,0,171	0/0:23,0:8:14.15:0,14,100	0/0:29,0:14:24.65:0,25,233	1/1:0,13:14:16.64:377,17,0	0/0:9,0:9:24.95:0,25,420	0/0:1,0:1:3.01:0,3,56	1/1:35,0:35:4.35:771,4,0	0/1:5,0:5:7.04:7,0,58	1/1:0,9:10:27.07:510,27,0	1/1:0,10:10:16.29:399,16,0	0/0:4,0:4:9.03:0,9,102	0/0:2,0:2:6.02:0,6,69	0/0:9,0:9:18.05:0,18,204	1/1:0,4:4:3.01:73,3,0	1/1:1,3:4:5.99:144,6,0	0/0:23,0:23:62.84:0,63,1414	1/1:2,21:24:18.06:392,18,0	0/1:7,0:6:2.17:2,0,186	0/0:7,0:7:12.04:0,12,246	0/0:5,0:5:9.03:0,9,160	./.	0/0:4,0:4:9.03:0,9,118	0/0:4,0:4:3.46:0,3,25	1/1:0,9:9:18.06:433,18,0	0/1:6,0:6:37.85:62,0,38	0/0:7,0:7:4.13:0,4,165	0/0:5,0:5:12.04:0,12,232
chr10	45818221	.	ATT	A	995.80	PASS	AB=0.870;AC=31;AF=0.574;AN=54;BaseQRankSum=5.079;DP=273;FS=9.198;HRun=14;HaplotypeScore=71.5392;InbreedingCoeff=0.4723;MQ=72.20;MQ0=5;MQRankSum=-5.496;QD=6.26;ReadPosRankSum=3.118;VQSLOD=-0.4431;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,2:9:5.99:55,6,0	0/1:4,0:4:34.15:34,0,54	0/0:24,0:10:12.29:0,12,81	0/1:27,0:12:0.18:0,0,47	1/1:14,0:14:13.16:87,13,0	0/1:7,0:7:10.05:10,0,17	0/0:1,0:1:0:0,0,0	0/0:35,0:35:33.49:0,33,223	1/1:0,2:5:11.59:81,12,0	1/1:10,0:10:21.31:136,21,0	1/1:10,0:10:13.07:98,13,0	1/1:0,4:5:9.01:83,9,0	1/1:0,2:2:6.01:55,6,0	1/1:0,6:9:18.01:166,18,0	1/1:4,0:4:2.97:20,3,0	1/1:4,0:4:5.90:39,6,0	0/0:26,0:26:65.60:0,66,679	1/1:23,0:23:14.62:94,15,0	0/1:4,0:5:3.53:4,0,23	0/0:6,0:7:8.89:0,9,60	0/0:3,0:4:2.98:0,3,21	./.	1/1:1,2:4:6:55,6,0	0/0:0,0:3:0:0,0,0	1/1:9,0:9:17.76:118,18,0	0/0:7,0:7:16.32:0,16,95	0/1:2,1:6:13.06:33,0,13	0/0:5,0:5:5.94:0,6,41
chr10	45820584	.	CGTGTGT	C	972.37	PASS	AB=0.771;AC=11;AF=0.220;AN=50;BaseQRankSum=2.737;DP=518;FS=4.901;HRun=0;HaplotypeScore=132.7378;InbreedingCoeff=0.5772;MQ=64.77;MQ0=9;MQRankSum=-3.060;QD=8.53;ReadPosRankSum=-0.161;VQSLOD=2.5035;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:3.01:0,3,74	0/0:12,0:12:9.03:0,9,238	./.	./.	1/1:15,6:21:6.90:82,7,0	0/0:13,0:13:9.03:0,9,212	0/0:25,0:24:18.03:0,18,359	0/0:23,0:20:9.03:0,9,225	0/0:19,0:18:3.01:0,3,56	1/1:10,5:15:9.65:197,10,0	0/0:12,0:11:5.96:0,6,45	0/0:14,0:14:9.03:0,9,162	0/0:16,0:15:6.02:0,6,156	0/0:17,0:17:3.01:0,3,94	1/1:12,3:17:9.01:146,9,0	1/1:6,11:17:27.09:549,27,0	0/0:25,0:29:50.31:0,50,1173	0/1:19,1:26:2.72:3,0,87	0/0:19,0:18:15.05:0,15,399	0/0:19,0:19:12.04:0,12,239	0/0:25,0:23:3.01:0,3,81	./.	0/0:14,0:13:2.89:0,3,55	0/0:21,0:20:11.98:0,12,303	1/1:13,1:16:9.03:145,9,0	0/0:26,0:26:26.99:0,27,702	0/0:11,0:10:12.04:0,12,283	0/0:6,0:6:6.02:0,6,101
chr10	45821416	.	CGTGTGT	C	1348.87	PASS	AB=0.885;AC=16;AF=0.286;AN=56;BaseQRankSum=1.925;DP=661;FS=2.675;HRun=0;HaplotypeScore=146.5632;InbreedingCoeff=0.6551;MQ=66.92;MQ0=11;MQRankSum=-3.481;QD=7.41;ReadPosRankSum=0.747;VQSLOD=2.5195;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:34:18.41:0,18,425	0/0:7,0:7:9.03:0,9,225	0/0:30,0:22:0:0,0,0	0/0:27,0:17:0.47:0,0,1	1/1:20,7:28:12.04:204,12,0	1/1:11,0:19:9.03:126,9,0	0/1:20,0:26:13.93:114,0,14	0/0:21,0:20:12.01:0,12,184	0/0:15,0:22:6.47:0,6,152	1/1:12,3:16:12.04:223,12,0	1/1:7,6:14:11.77:174,12,0	0/0:23,0:23:14.93:0,15,356	0/0:17,0:23:9.03:0,9,198	0/0:20,0:27:5.91:0,6,157	1/1:11,7:18:8.99:141,9,0	1/1:12,8:20:5.76:121,6,0	0/0:33,0:33:33.97:0,34,826	0/1:21,1:21:14.89:166,0,15	0/0:13,0:13:9:0,9,141	0/0:15,0:16:20.57:0,21,457	0/0:46,0:60:17.87:0,18,345	0/0:25,0:36:15.57:0,16,309	0/0:8,0:8:9.01:0,9,176	0/0:29,0:28:33.11:0,33,942	1/1:10,7:17:15:261,15,0	0/0:25,0:27:27.97:0,28,595	0/0:13,0:21:15.16:0,15,276	0/0:18,0:18:26.93:0,27,585
chr10	45821879	.	C	CG	16078.42	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-14.588;DP=767;FS=0.268;HRun=0;HaplotypeScore=72.0873;InbreedingCoeff=1.0000;MQ=85.64;MQ0=0;MQRankSum=-3.161;QD=42.20;ReadPosRankSum=4.609;VQSLOD=5.3494;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,55:59:99:2250,141,0	0/0:11,0:11:33.10:0,33,444	0/0:29,0:29:75.72:0,76,1031	0/0:25,0:25:68.48:0,68,882	0/0:22,0:22:63.19:0,63,852	0/0:31,0:31:90.29:0,90,1234	0/0:23,0:23:69.23:0,69,958	0/0:43,0:43:99:0,123,1701	1/1:0,29:29:81.28:1286,81,0	0/0:27,0:27:78.26:0,78,1077	0/0:21,0:21:63.20:0,63,855	1/1:0,29:29:84.29:1334,84,0	1/1:0,19:19:42.14:670,42,0	1/1:0,26:26:66.23:1052,66,0	0/0:33,0:33:96.29:0,96,1306	0/0:21,0:21:60.19:0,60,821	0/0:34,0:34:99:0,102,1407	0/0:16,0:16:48.16:0,48,671	1/1:0,23:23:69.21:1046,69,0	1/1:1,36:37:99:1546,99,0	1/1:0,38:38:96.33:1532,96,0	1/1:0,22:22:63.21:1005,63,0	1/1:0,21:21:54.18:862,54,0	1/1:0,32:32:90.31:1437,90,0	0/0:22,0:22:60.20:0,60,834	0/0:28,0:28:84.25:0,84,1155	1/1:0,25:25:72.25:1149,72,0	1/1:0,21:21:57.19:909,57,0
chr10	45821978	.	TTTCC	T	2360.94	PASS	AB=0.921;AC=25;AF=0.500;AN=50;BaseQRankSum=-2.790;DP=698;FS=0.000;HRun=0;HaplotypeScore=166.8115;InbreedingCoeff=0.4849;MQ=68.73;MQ0=6;MQRankSum=0.502;QD=6.28;ReadPosRankSum=-0.929;VQSLOD=2.3055;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:36,0:36:11.35:11,0,84	1/1:5,8:13:18.06:277,18,0	./.	./.	1/1:18,13:31:36.04:480,36,0	0/0:23,0:23:4.80:0,5,60	0/0:24,0:24:1.49:0,1,38	./.	0/0:18,0:18:5.39:0,5,35	1/1:19,13:32:41.73:600,42,0	1/1:10,7:17:11.97:146,12,0	0/1:26,0:26:6.20:6,0,117	0/1:19,0:20:4.12:4,0,109	0/0:21,0:21:16.47:0,16,137	1/1:12,0:25:21.01:190,21,0	1/1:12,7:19:5.90:92,6,0	0/0:27,0:27:48.16:0,48,1082	1/1:15,15:29:19.31:278,19,0	0/1:30,0:27:4.02:51,0,4	0/0:24,0:24:18.74:0,19,138	0/0:25,0:25:8.93:0,9,52	0/0:32,0:32:20.19:0,20,159	0/0:23,0:23:18.31:0,18,194	0/0:33,0:33:5.42:0,5,96	1/1:19,9:28:3.01:45,3,0	0/1:16,2:34:36.15:141,0,36	1/1:28,0:28:18.90:189,19,0	1/1:7,0:7:3:26,3,0
chr10	45822824	.	A	ACAGCCAGGTGGTCC	6243.84	PASS	AB=0.901;AC=13;AF=0.232;AN=56;BaseQRankSum=11.071;DP=834;FS=94.595;HRun=0;HaplotypeScore=330.1038;InbreedingCoeff=-0.0996;MQ=52.01;MQ0=9;MQRankSum=-11.837;QD=18.81;ReadPosRankSum=-2.327;VQSLOD=-0.6669;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:21,15:40:99:593,0,587	0/0:21,0:21:63.20:0,63,2507	0/0:33,0:12:33.07:0,33,706	0/0:32,0:19:57.02:0,57,1609	0/0:24,0:24:69.23:0,69,2507	0/0:15,0:15:45.12:0,45,1491	0/0:46,0:46:99:0,138,4822	0/0:30,0:30:87.25:0,87,2665	0/1:30,2:31:99:499,0,670	0/0:50,0:49:99:0,141,4987	0/0:20,0:20:60.16:0,60,1982	0/1:39,1:38:99:857,0,741	0/1:22,0:19:99:490,0,329	0/1:24,1:23:99:403,0,299	0/0:56,0:56:99:0,168,5736	0/0:26,0:26:78.25:0,78,2712	0/0:39,0:39:99:0,117,4205	0/0:27,0:27:72.18:0,72,2686	0/1:11,0:8:28.08:28,0,194	0/1:13,0:13:99:222,0,354	1/1:30,15:45:23.61:1244,24,0	0/1:11,14:39:99:843,0,131	0/1:10,3:12:99:429,0,219	0/1:30,0:28:99:624,0,316	0/0:32,0:32:93.29:0,93,3477	0/0:36,0:36:99:0,108,4201	0/0:15,0:12:27.93:0,28,689	0/1:4,0:3:10.97:11,0,170
chr10	45822884	.	CCAGGTGGTCACAGT	C	2048.52	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=13.158;DP=991;FS=1.728;HRun=0;HaplotypeScore=406.1865;InbreedingCoeff=-0.0006;MQ=47.76;MQ0=26;MQRankSum=-12.726;QD=3.99;ReadPosRankSum=-1.019;VQSLOD=0.8727;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:43,0:39:99:217,0,146	0/0:19,0:19:48.10:0,48,1651	0/0:46,0:27:29.63:0,30,282	0/0:43,0:29:15.78:0,16,355	0/0:23,0:23:50.85:0,51,1302	0/0:16,0:16:42.11:0,42,1547	0/0:40,0:40:96.23:0,96,1820	0/0:25,0:24:53.99:0,54,545	0/1:42,0:36:97.04:97,0,744	0/0:40,0:40:99:0,99,2408	0/0:15,0:15:39.06:0,39,792	0/1:50,0:47:99:261,0,694	0/1:42,0:37:99:216,0,394	0/1:40,0:34:99:199,0,368	0/0:46,0:46:99:0,114,3563	0/0:23,0:23:57.18:0,57,1874	0/0:47,0:47:99:0,132,3571	0/0:30,0:30:81.16:0,81,1936	1/1:23,21:32:25.64:203,26,0	0/1:30,0:29:99:180,0,188	1/1:70,0:57:23.11:114,23,0	0/1:42,0:33:99:189,0,152	0/1:29,0:27:29.55:182,0,30	0/1:45,0:39:99:323,0,380	0/0:34,0:34:58.99:0,59,2163	0/0:30,0:29:78.23:0,78,2378	0/1:20,0:16:11.71:12,0,371	0/1:16,0:16:25.95:26,0,193
chr10	45822921	.	C	CCTA	2146.95	PASS	AB=0.812;AC=13;AF=0.232;AN=56;BaseQRankSum=12.199;DP=885;FS=33.796;HRun=0;HaplotypeScore=229.8652;InbreedingCoeff=-0.3038;MQ=46.99;MQ0=27;MQRankSum=-12.603;QD=4.82;ReadPosRankSum=1.574;VQSLOD=1.6242;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:25,8:30:99:207,0,408	0/0:21,0:21:60.21:0,60,1102	0/0:22,0:13:11.48:0,11,552	0/0:37,0:27:69.20:0,69,1108	0/0:34,0:34:96.11:0,96,1682	0/0:22,0:22:63.15:0,63,1174	0/0:36,0:36:99:0,99,1790	0/0:29,0:29:87.27:0,87,1533	0/1:24,12:32:99:278,0,778	0/0:36,0:36:99:0,105,1912	0/0:13,0:13:39.13:0,39,727	0/1:30,10:37:99:261,0,806	0/1:25,11:33:99:271,0,637	0/1:27,13:34:99:351,0,432	0/0:36,0:36:99:0,102,1870	0/0:30,0:30:90.31:0,90,1677	0/0:38,0:38:99:0,111,2012	0/0:27,0:27:81.28:0,81,1509	0/1:21,2:12:57.24:57,0,110	0/1:33,9:36:99:222,0,721	0/1:49,1:36:17.23:17,0,203	0/1:28,9:23:99:136,0,383	0/1:23,10:29:99:187,0,340	0/1:28,7:31:49.56:50,0,408	0/0:32,0:32:96.31:0,96,1730	0/0:27,0:27:71.34:0,71,1435	0/1:16,6:19:99:140,0,224	0/1:12,5:17:99:124,0,438
chr10	45822924	.	AGTC	A	1189.16	PASS	AB=0.808;AC=13;AF=0.232;AN=56;BaseQRankSum=11.779;DP=873;FS=38.329;HRun=0;HaplotypeScore=224.0417;InbreedingCoeff=-0.2912;MQ=49.02;MQ0=24;MQRankSum=-12.583;QD=2.75;ReadPosRankSum=1.666;VQSLOD=1.4518;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:24,8:30:99:151,0,357	0/0:21,0:21:60.21:0,60,1478	0/0:24,0:14:38.96:0,39,811	0/0:36,0:29:72.24:0,72,1506	0/0:32,0:32:93.14:0,93,2224	0/0:22,0:22:62.78:0,63,1495	0/0:36,0:36:99:0,99,2348	0/0:30,0:30:90.31:0,90,2164	0/1:23,12:32:99:137,0,578	0/0:38,0:38:99:0,114,2749	0/0:14,0:14:42.14:0,42,1025	0/1:30,10:37:99:168,0,681	0/1:24,11:33:99:143,0,532	0/1:25,13:33:99:123,0,401	0/0:35,0:35:99:0,102,2465	0/0:31,0:31:93.32:0,93,2259	0/0:37,0:37:99:0,111,2707	0/0:27,0:27:81.26:0,81,1945	0/1:23,2:17:30.38:30,0,171	0/1:31,9:34:99:105,0,712	0/1:46,1:34:54.53:55,0,146	0/1:25,10:21:98.24:98,0,368	0/1:23,10:29:99:172,0,353	0/1:26,7:29:2.33:2,0,453	0/0:32,0:32:96.33:0,96,2322	0/0:26,0:26:78.25:0,78,1807	0/1:16,6:19:99:104,0,184	0/1:12,5:17:53:53,0,363
chr10	45822969	.	A	AAG	126.50	PASS	AB=0.788;AC=3;AF=0.054;AN=56;BaseQRankSum=5.575;DP=736;FS=16.439;HRun=0;HaplotypeScore=131.8631;InbreedingCoeff=-0.0611;MQ=76.06;MQ0=0;MQRankSum=-5.319;QD=1.95;ReadPosRankSum=-3.737;VQSLOD=0.4402;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,2:36:35.54:0,36,1446	0/0:15,0:15:42.14:0,42,682	0/0:29,0:28:84.27:0,84,1325	0/0:31,0:31:90.26:0,90,1350	0/0:28,0:28:84.27:0,84,1340	0/0:25,0:25:75.26:0,75,1216	0/0:34,0:34:93.32:0,93,1510	0/0:19,0:19:57.17:0,57,863	0/0:15,1:16:45.15:0,45,733	0/0:46,0:46:99:0,135,2180	0/0:16,0:16:45.15:0,45,733	0/0:20,2:21:54.18:0,54,879	0/0:18,2:20:51.17:0,51,830	0/0:28,1:29:75.26:0,75,1217	0/0:32,0:32:96.31:0,96,1541	0/0:28,0:28:81.28:0,81,1319	0/0:28,0:28:84.29:0,84,1364	0/0:25,0:25:75.23:0,75,1197	0/0:20,1:19:54.14:0,54,851	0/1:21,12:30:99:105,0,830	0/0:25,8:30:39.13:0,39,626	0/1:16,5:19:29.64:30,0,587	0/0:20,2:22:34.19:0,34,810	0/0:32,3:35:71.76:0,72,1141	0/0:33,0:33:96.33:0,96,1555	0/0:25,0:25:69.23:0,69,1107	0/0:22,1:23:5.43:0,5,965	0/1:8,2:10:91.64:92,0,361
chr10	45823709	.	G	GC	9309.12	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=11.727;DP=635;FS=3.580;HRun=6;HaplotypeScore=80.5847;InbreedingCoeff=0.9995;MQ=89.07;MQ0=0;MQRankSum=-1.403;QD=30.52;ReadPosRankSum=3.123;VQSLOD=5.4849;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,39:44:99:1296,105,0	0/0:14,0:14:42.10:0,42,428	0/0:24,0:24:42.25:0,42,577	0/0:23,0:23:50.64:0,51,465	0/0:27,0:27:69.15:0,69,703	0/0:16,0:16:39.07:0,39,391	0/0:24,0:24:69.13:0,69,695	0/0:26,0:26:66.10:0,66,653	1/1:0,24:24:63.20:789,63,0	0/0:27,0:27:60.12:0,60,611	0/0:15,0:15:33.04:0,33,326	1/1:3,21:25:60.19:755,60,0	1/1:4,22:26:23.56:602,24,0	1/1:1,24:25:69.22:867,69,0	0/0:22,0:22:66.15:0,66,673	0/0:19,0:19:54.12:0,54,550	0/0:35,0:35:99:0,99,1010	0/0:16,0:16:45.10:0,45,459	1/1:4,18:22:54.17:669,54,0	1/1:0,18:18:48.07:564,48,0	1/1:3,34:37:87.28:1094,87,0	1/1:2,16:18:45.14:561,45,0	1/1:0,13:13:36.12:453,36,0	1/1:1,15:16:39.12:491,39,0	0/0:20,0:20:51.11:0,51,520	0/0:22,0:22:66.12:0,66,656	1/1:1,25:26:62.92:792,63,0	1/1:1,10:11:30.10:377,30,0
chr10	45823855	.	TTA	T	21526.52	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=2.982;DP=654;FS=0.000;HRun=0;HaplotypeScore=99.8907;InbreedingCoeff=0.9883;MQ=87.75;MQ0=0;MQRankSum=-8.116;QD=36.67;ReadPosRankSum=5.108;VQSLOD=6.4037;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,41:45:99:1543,111,0	1/1:0,9:9:27.09:378,27,0	0/0:20,0:20:48.12:0,48,784	0/0:25,0:25:51.15:0,51,817	1/1:1,25:26:66.22:924,66,0	1/1:0,30:30:78.26:1093,78,0	1/1:1,19:20:48.16:672,48,0	1/1:0,22:22:66.21:907,66,0	1/1:2,18:20:54.18:755,54,0	1/1:1,29:30:84.27:1160,84,0	1/1:2,16:18:39.13:546,39,0	1/1:0,19:19:57.19:798,57,0	1/1:3,19:22:57.19:798,57,0	1/1:0,27:27:75.25:1050,75,0	1/1:1,25:26:69.23:967,69,0	1/1:0,20:20:48.16:672,48,0	0/0:22,0:22:63.22:0,63,1134	1/1:1,12:13:27.09:378,27,0	1/1:0,24:24:72.24:1009,72,0	1/1:0,31:31:93.28:1281,93,0	1/1:1,28:29:66.22:924,66,0	1/1:1,23:24:60.20:840,60,0	1/1:0,15:15:42.14:588,42,0	1/1:2,29:31:81.27:1134,81,0	1/1:1,13:14:36.12:504,36,0	1/1:0,30:30:90.30:1260,90,0	1/1:0,32:32:84.24:1176,84,0	1/1:1,9:10:12.04:168,12,0
chr10	45824679	.	TA	T	4347.24	PASS	AB=0.917;AC=27;AF=0.482;AN=56;BaseQRankSum=11.178;DP=600;FS=0.000;HRun=12;HaplotypeScore=68.4468;InbreedingCoeff=0.9351;MQ=70.48;MQ0=0;MQRankSum=-2.015;QD=15.98;ReadPosRankSum=3.254;VQSLOD=5.8418;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,30:34:83.67:650,84,0	0/1:10,1:11:2.20:2,0,162	0/0:17,0:16:30:0,30,287	0/0:16,0:13:14.77:0,15,104	0/0:19,0:20:24.68:0,25,405	0/0:29,3:33:11.27:0,11,640	0/0:15,1:16:18.78:0,19,349	0/0:22,0:22:45.05:0,45,434	1/1:2,19:21:41.83:325,42,0	0/0:26,0:25:66.09:0,66,659	0/0:30,1:33:60.60:0,61,765	1/1:7,13:20:35.83:279,36,0	1/1:4,10:14:31.91:238,32,0	1/1:0,4:4:8.97:70,9,0	0/0:20,1:21:36.87:0,37,549	0/0:20,0:20:28.04:0,28,462	0/0:26,0:27:71.95:0,72,699	0/0:23,2:25:19.66:0,20,563	1/1:3,13:16:38.84:301,39,0	1/1:2,14:16:14.39:295,14,0	1/1:4,12:16:29.88:232,30,0	1/1:7,29:37:73.72:563,74,0	1/1:3,17:20:44.82:348,45,0	1/1:2,20:22:50.78:395,51,0	0/0:19,0:20:47.93:0,48,470	0/0:32,0:32:75.14:0,75,756	1/1:5,18:23:50.76:394,51,0	1/1:2,16:17:32.87:255,33,0
chr10	45824976	.	G	GCACCACC	14953.19	PASS	AB=0.798;AC=26;AF=0.464;AN=56;BaseQRankSum=5.309;DP=540;FS=6.188;HRun=0;HaplotypeScore=114.0241;InbreedingCoeff=0.8243;MQ=48.04;MQ0=4;MQRankSum=-15.483;QD=67.36;ReadPosRankSum=-0.054;VQSLOD=4.5689;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,13:22:33.11:1268,33,0	0/0:4,0:4:12.04:0,12,312	0/0:15,0:7:21.07:0,21,492	0/0:18,0:12:33.11:0,33,763	0/0:18,0:18:51.17:0,51,1302	0/0:14,0:14:42.14:0,42,1085	0/0:34,0:34:96.33:0,96,2493	0/0:28,0:25:72.23:0,72,1780	1/1:5,12:13:33.11:1225,33,0	0/0:29,0:28:78.27:0,78,2027	0/0:18,0:18:51.17:0,51,1299	1/1:3,14:13:39.13:1506,39,0	1/1:2,11:12:30.10:1195,30,0	1/1:4,11:13:24.08:953,24,0	0/0:21,0:21:60.21:0,60,1551	0/1:18,1:19:62.36:62,0,1245	0/0:45,0:45:99:0,129,3239	0/0:28,0:27:55.24:0,55,1925	0/1:9,9:18:32.62:1526,0,33	1/1:0,9:9:27.09:1052,27,0	1/1:3,2:5:2.97:20,3,0	1/1:7,12:21:42.10:1471,42,0	1/1:4,14:17:32.93:1281,33,0	1/1:1,8:8:24.08:898,24,0	0/0:17,0:17:51.18:0,51,1301	0/0:29,0:29:84.28:0,84,2132	1/1:9,10:19:51.18:1908,51,0	1/1:1,8:9:15.05:587,15,0
chr10	45825241	.	AAAG	A	615.29	PASS	AB=0.987;AC=14;AF=0.250;AN=56;BaseQRankSum=5.713;DP=421;FS=2.851;HRun=0;HaplotypeScore=72.4254;InbreedingCoeff=0.1022;MQ=53.75;MQ0=8;MQRankSum=0.555;QD=3.48;ReadPosRankSum=1.110;VQSLOD=1.1936;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:36,2:37:53.04:203,0,53	0/0:7,0:6:0.68:0,1,54	0/0:18,0:7:14.93:0,15,170	0/1:22,0:6:8.52:9,0,10	0/0:15,0:14:22.98:0,23,159	0/0:14,0:14:25.41:0,25,276	0/0:12,0:11:12.68:0,13,94	0/0:30,0:28:56.34:0,56,476	0/0:9,0:9:17.17:0,17,93	0/0:19,0:19:33.01:0,33,295	0/0:15,0:15:14.65:0,15,93	0/0:7,0:7:10.08:0,10,49	0/1:12,0:12:0.84:1,0,74	0/1:14,0:13:19.17:19,0,38	0/0:15,0:15:20.61:0,21,195	0/0:6,0:5:5.94:0,6,42	0/0:32,0:32:43.86:0,44,436	0/0:11,0:10:12.05:0,12,125	1/1:13,1:14:2.37:112,2,0	0/1:18,0:17:11.34:98,0,11	0/0:2,7:9:0:0,0,0	1/1:4,0:2:2.97:20,3,0	0/1:11,0:10:24.36:58,0,24	0/1:22,0:20:49.57:91,0,50	0/0:6,0:6:4.18:0,4,35	0/0:19,0:19:30.38:0,30,291	0/1:17,1:16:10.13:110,0,10	1/1:4,0:2:3.01:37,3,0
chr10	45825242	.	AAG	A	889.99	PASS	AB=1.000;AC=20;AF=0.385;AN=52;BaseQRankSum=3.345;DP=404;FS=5.674;HRun=0;HaplotypeScore=64.5704;InbreedingCoeff=0.6862;MQ=56.10;MQ0=6;MQRankSum=-0.606;QD=5.30;ReadPosRankSum=-1.840;VQSLOD=1.5702;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:34,3:36:32.06:253,32,0	0/0:7,0:6:11.61:0,12,77	0/0:19,0:8:20.68:0,21,199	0/1:23,0:7:5.59:6,0,35	0/0:13,0:12:20.46:0,20,142	0/0:13,0:13:28.44:0,28,247	0/0:11,0:10:12.58:0,13,62	0/0:31,0:29:41.97:0,42,377	0/0:9,0:9:2.96:0,3,19	0/0:18,0:18:38.88:0,39,279	0/0:13,0:13:12.08:0,12,81	./.	0/1:12,0:12:26.03:26,0,33	1/1:13,0:12:8.32:65,8,0	0/0:14,0:14:29.15:0,29,202	0/0:5,0:4:5.94:0,6,42	0/0:30,0:30:39.81:0,40,337	0/0:10,0:10:19.66:0,20,130	1/1:11,1:12:17.92:148,18,0	1/1:7,10:16:17.85:123,18,0	./.	1/1:3,0:2:2.97:20,3,0	1/1:10,0:9:4.50:78,4,0	1/1:21,0:20:15.53:152,16,0	0/0:6,0:6:6.37:0,6,34	0/0:6,0:21:32.95:0,33,276	1/1:16,0:14:23.73:181,24,0	1/1:2,2:2:2.99:24,3,0
chr10	45825243	.	AG	A	1115.31	PASS	AB=0.863;AC=23;AF=0.426;AN=54;BaseQRankSum=3.418;DP=370;FS=2.888;HRun=1;HaplotypeScore=55.6774;InbreedingCoeff=0.6989;MQ=59.42;MQ0=6;MQRankSum=-2.246;QD=6.97;ReadPosRankSum=-2.434;VQSLOD=-0.0790;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:28,4:31:43.95:309,44,0	0/0:7,0:6:12.33:0,12,85	0/0:21,0:10:27.40:0,27,260	0/1:23,0:7:5.54:6,0,37	0/0:13,0:12:23.21:0,23,161	0/0:13,0:13:29.80:0,30,239	0/0:11,0:10:15.70:0,16,71	0/0:28,0:26:39.83:0,40,338	0/1:5,0:5:5.56:6,0,13	0/0:19,0:19:44.24:0,44,335	0/0:13,0:13:14.07:0,14,105	1/1:7,0:7:6.36:40,6,0	0/1:3,7:10:21.97:25,0,22	1/1:8,1:8:16.31:126,16,0	0/0:14,0:14:37.96:0,38,267	0/0:4,0:3:5.94:0,6,42	0/0:25,0:25:26.14:0,26,271	0/0:11,0:11:23.55:0,24,161	1/1:5,6:11:10.44:138,10,0	1/1:14,0:14:18.79:125,19,0	./.	1/1:0,2:1:2.97:20,3,0	1/1:8,2:9:16.97:102,17,0	1/1:18,1:18:26.88:196,27,0	0/0:7,0:7:11.60:0,12,77	0/0:16,0:16:35.03:0,35,260	1/1:14,0:12:27.19:205,27,0	1/1:3,0:2:2.92:17,3,0
chr10	45825827	.	G	GAA	7090.50	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-8.357;DP=534;FS=3.181;HRun=9;HaplotypeScore=72.0563;InbreedingCoeff=0.9923;MQ=78.44;MQ0=1;MQRankSum=-1.794;QD=32.68;ReadPosRankSum=0.488;VQSLOD=5.1200;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,22:29:54.18:831,54,0	0/0:10,0:10:24.05:0,24,255	0/0:28,0:29:56.52:0,57,547	0/0:14,0:12:11.15:0,11,167	0/0:30,0:30:75.12:0,75,783	0/0:21,0:21:60.15:0,60,638	0/0:20,0:21:44.62:0,45,512	0/0:33,0:34:68.32:0,68,733	1/1:1,14:15:33.11:495,33,0	0/0:21,0:21:51.11:0,51,543	0/0:23,0:23:57.11:0,57,597	1/1:1,13:14:36.12:554,36,0	1/1:2,13:15:27.05:389,27,0	1/1:2,9:12:18.95:279,19,0	0/0:16,0:16:36.07:0,36,383	0/0:18,0:18:45.11:0,45,479	0/0:26,0:26:63.11:0,63,662	0/0:18,0:17:51.13:0,51,542	1/1:1,15:16:45.13:668,45,0	1/1:2,17:19:48.04:661,48,0	1/1:2,7:9:21.07:323,21,0	1/1:4,10:17:32.59:453,33,0	1/1:2,12:14:36.12:552,36,0	1/1:2,16:19:44.64:655,45,0	0/0:18,0:18:42.07:0,42,447	0/0:17,0:17:45.09:0,45,473	1/1:3,21:28:62.37:906,62,0	1/1:1,8:8:21.07:323,21,0
chr10	45826215	.	G	GA	5019.04	PASS	AB=1.000;AC=27;AF=0.482;AN=56;BaseQRankSum=4.039;DP=533;FS=4.335;HRun=6;HaplotypeScore=95.1882;InbreedingCoeff=0.9337;MQ=48.65;MQ0=10;MQRankSum=-2.309;QD=19.61;ReadPosRankSum=1.715;VQSLOD=4.1974;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:12,17:28:60.19:753,60,0	0/0:10,0:10:24.02:0,24,236	0/0:4,0:3:2.93:0,3,19	0/1:7,0:4:0:0,0,5	0/0:22,0:21:47.99:0,48,476	0/0:19,0:19:45.08:0,45,452	0/0:27,0:26:50.61:0,51,487	0/0:22,0:22:48.03:0,48,469	1/1:12,6:18:33:365,33,0	0/0:17,0:16:35.98:0,36,345	0/0:20,0:20:36.06:0,36,365	1/1:9,7:16:27.05:306,27,0	1/1:10,5:14:25.77:261,26,0	1/1:7,9:15:36.10:439,36,0	0/0:13,0:13:24.02:0,24,231	0/0:13,0:12:26.85:0,27,257	0/0:38,0:38:55.06:0,55,597	0/0:26,0:24:35.63:0,36,363	1/1:16,7:22:33.11:413,33,0	1/1:12,10:22:29.87:310,30,0	1/1:10,5:14:15.05:189,15,0	1/1:14,12:25:45.13:543,45,0	1/1:9,12:19:36.07:435,36,0	1/1:10,11:21:33.10:407,33,0	0/0:26,0:26:54:0,54,524	0/0:20,0:19:44.98:0,45,436	1/1:12,10:21:44.92:503,45,0	1/1:3,2:5:8.98:95,9,0
chr10	45826226	.	C	CA	1110.91	PASS	AB=0.774;AC=15;AF=0.268;AN=56;BaseQRankSum=-6.282;DP=522;FS=0.000;HRun=15;HaplotypeScore=95.8194;InbreedingCoeff=0.3169;MQ=50.22;MQ0=10;MQRankSum=1.330;QD=5.50;ReadPosRankSum=-0.900;VQSLOD=2.4418;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:29:34.59:0,35,110	0/1:7,3:10:11.75:77,0,12	0/1:10,0:5:23.72:24,0,24	0/0:7,0:5:1.96:0,2,22	1/1:14,8:22:10.02:264,10,0	0/1:7,9:16:6.03:64,0,6	0/1:18,7:25:71.03:167,0,71	0/0:24,1:29:21.91:0,22,219	0/0:13,0:17:18.91:0,19,57	1/1:10,8:19:19.95:175,20,0	0/1:16,6:22:18.05:83,0,18	0/0:12,0:15:18.53:0,19,56	0/0:9,0:13:22.20:0,22,75	0/0:15,0:17:18.41:0,18,54	0/1:7,3:10:10.77:21,0,11	1/1:5,7:12:11.99:101,12,0	0/0:30,1:35:37.42:0,37,281	0/1:15,11:25:80.63:147,0,81	0/0:13,0:19:11.55:0,12,61	0/0:7,0:17:16.56:0,17,57	0/0:8,0:9:8.97:0,9,26	0/0:12,0:18:30.56:0,31,110	0/0:18,0:19:14.71:0,15,62	0/0:11,0:18:18.98:0,19,59	1/1:10,15:25:5.96:159,6,0	0/0:21,0:22:33.34:0,33,189	0/0:11,0:16:19.74:0,20,69	0/0:3,0:9:14.20:0,14,41
chr10	45826784	.	TTGTCACAC	T	9837.41	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=14.948;DP=625;FS=0.000;HRun=0;HaplotypeScore=164.1907;InbreedingCoeff=0.9988;MQ=83.81;MQ0=0;MQRankSum=-16.440;QD=58.56;ReadPosRankSum=2.526;VQSLOD=4.8089;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,29:32:54.19:1509,54,0	0/0:16,0:16:45.15:0,45,1999	0/0:21,0:21:60.20:0,60,2369	0/0:28,0:28:69.23:0,69,2366	0/0:13,0:13:39.13:0,39,1736	0/0:20,0:20:60.21:0,60,2560	0/0:23,0:23:63.19:0,63,2414	0/0:18,0:18:54.19:0,54,2306	1/1:0,23:23:57.20:1635,57,0	0/0:17,0:17:51.18:0,51,2166	0/0:12,0:12:33.10:0,33,1354	1/1:1,12:13:30.10:861,30,0	1/1:0,19:19:45.15:1290,45,0	1/1:2,26:28:69.24:1967,69,0	0/0:24,0:24:72.25:0,72,3091	0/0:22,0:22:66.23:0,66,2839	0/0:34,0:34:99:0,102,4391	0/0:23,0:23:66.23:0,66,2951	0/0:23,0:23:66.23:0,66,2888	0/0:14,0:14:39.13:0,39,1633	0/0:60,0:60:99:0,178,7829	1/1:2,13:15:39.13:1037,39,0	1/1:1,10:11:27.09:775,27,0	1/1:6,21:27:27.04:764,27,0	0/0:26,0:26:78.27:0,78,3290	0/0:30,0:30:90.30:0,90,3831	0/0:26,0:26:69.22:0,69,2889	0/0:7,0:7:21.07:0,21,870
chr10	45827945	.	C	CT	3641.62	PASS	AB=0.805;AC=26;AF=0.464;AN=56;BaseQRankSum=-4.777;DP=516;FS=4.452;HRun=10;HaplotypeScore=50.7959;InbreedingCoeff=0.7240;MQ=60.30;MQ0=5;MQRankSum=-0.852;QD=13.49;ReadPosRankSum=0.089;VQSLOD=3.3084;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,21:27:56.81:569,57,0	0/0:9,0:9:23.97:0,24,197	0/0:11,0:5:5.94:0,6,46	0/1:14,0:6:0:0,0,0	0/0:21,0:20:40.94:0,41,323	0/0:17,1:18:11.04:0,11,269	0/0:20,0:20:41.16:0,41,329	0/0:21,0:20:21.27:0,21,297	1/1:5,9:14:17.88:174,18,0	0/0:19,0:19:41.94:0,42,343	0/0:16,0:16:32.94:0,33,268	1/1:7,3:12:15.10:200,15,0	1/1:5,5:10:11.90:111,12,0	1/1:2,6:8:12.03:128,12,0	0/0:15,0:15:32.94:0,33,268	0/0:5,0:5:11.99:0,12,99	0/0:37,2:40:5.95:0,6,654	0/1:24,2:23:36.78:37,0,246	1/1:8,10:18:8.36:262,8,0	0/1:10,11:21:3.82:141,0,4	0/1:3,4:6:9.61:113,0,10	1/1:5,17:23:14.28:338,14,0	1/1:11,19:29:46.74:434,47,0	1/1:0,14:14:30.08:320,30,0	0/0:19,0:19:41.89:0,42,339	0/0:27,0:28:61.41:0,61,497	1/1:9,23:31:63.09:657,63,0	1/1:1,9:10:15.04:160,15,0
chr10	45829515	.	C	CAA	5011.63	PASS	AB=0.552;AC=44;AF=0.786;AN=56;BaseQRankSum=0.725;DP=466;FS=5.679;HRun=2;HaplotypeScore=93.6081;InbreedingCoeff=0.7364;MQ=67.44;MQ0=12;MQRankSum=-1.503;QD=13.54;ReadPosRankSum=0.927;VQSLOD=2.0163;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:8,28:36:1.24:164,0,1	1/1:1,8:9:11.82:162,12,0	0/0:33,0:17:47.85:0,48,455	0/0:26,0:16:40.43:0,40,373	1/1:4,1:5:14.89:110,15,0	1/1:20,0:20:26.30:302,26,0	1/1:26,0:26:32.94:344,33,0	0/0:14,0:14:33:0,33,289	1/1:2,16:19:6.02:112,6,0	1/1:12,1:12:30.79:276,31,0	1/1:6,0:6:11.96:96,12,0	0/1:3,16:20:0.08:140,0,0	1/1:15,2:18:33.47:400,33,0	1/1:3,8:12:4.31:161,4,0	1/1:17,3:17:41.74:387,42,0	1/1:12,2:13:16.88:160,17,0	0/0:11,0:11:20.82:0,21,151	1/1:13,2:15:37.36:324,37,0	1/1:9,0:9:26.95:229,27,0	1/1:9,0:9:5.30:119,5,0	1/1:28,0:28:50.72:459,51,0	1/1:2,8:10:14.87:135,15,0	1/1:2,9:11:3.87:103,4,0	1/1:4,23:28:5.09:176,5,0	1/1:11,0:11:24.02:238,24,0	0/0:12,0:12:29.75:0,30,257	1/1:21,0:21:20.83:246,21,0	1/1:9,0:9:14.78:169,15,0
chr10	45829561	.	A	ACG	6284.69	PASS	AB=0.933;AC=36;AF=0.643;AN=56;BaseQRankSum=-3.930;DP=629;FS=35.322;HRun=0;HaplotypeScore=115.7780;InbreedingCoeff=0.3445;MQ=54.76;MQ0=21;MQRankSum=4.987;QD=12.47;ReadPosRankSum=2.671;VQSLOD=2.5335;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:37,0:37:21.06:504,21,0	1/1:9,0:9:18:229,18,0	0/0:27,0:10:20.77:0,21,212	0/0:33,0:11:20.69:0,21,216	1/1:19,0:19:35.08:271,35,0	1/1:24,0:24:6.85:275,7,0	0/1:31,0:31:45.07:329,0,45	0/0:17,0:17:44.60:0,45,354	1/1:18,0:18:9.36:138,9,0	0/1:6,13:17:43.35:191,0,43	1/1:2,16:18:3.01:58,3,0	1/1:23,1:24:27.21:374,27,0	1/1:28,1:29:15.22:444,15,0	1/1:23,0:23:21.50:322,21,0	1/1:27,0:26:24.16:374,24,0	1/1:22,1:25:46.68:454,47,0	0/0:19,0:19:37.44:0,37,276	0/1:19,1:21:20.95:265,0,21	0/1:14,0:13:1.85:211,0,2	0/1:15,0:15:27.17:133,0,27	0/1:32,0:32:72.02:263,0,72	1/1:17,0:17:18.79:295,19,0	1/1:16,0:15:16.45:277,16,0	1/1:34,0:34:15.99:436,16,0	0/1:22,1:22:8.19:286,0,8	0/0:26,0:25:59.80:0,60,490	0/1:25,0:25:99:154,0,127	0/0:3,0:3:5.80:0,6,33
chr10	45830165	.	CT	C	4474.08	PASS	AB=0.875;AC=21;AF=0.375;AN=56;BaseQRankSum=1.123;DP=570;FS=2.092;HRun=10;HaplotypeScore=95.2471;InbreedingCoeff=0.9226;MQ=67.41;MQ0=2;MQRankSum=1.439;QD=19.54;ReadPosRankSum=2.330;VQSLOD=5.4026;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:33:82.95:0,83,470	1/1:1,8:9:17.99:156,18,0	0/0:27,0:15:15:0,15,145	0/1:12,1:11:6.26:6,0,42	1/1:3,26:29:68.97:599,69,0	1/1:2,29:31:74.98:651,75,0	1/1:2,12:14:32.99:287,33,0	0/0:32,0:32:69.18:0,69,757	0/0:3,0:17:28.41:0,28,142	1/1:4,24:28:65.96:568,66,0	1/1:4,29:33:83.98:729,84,0	0/0:5,0:17:28.52:0,29,151	0/0:3,0:13:22.89:0,23,133	0/0:1,0:11:22.89:0,23,133	1/1:2,15:17:38.99:339,39,0	1/1:3,13:16:38.99:339,39,0	0/0:28,0:28:75.11:0,75,802	1/1:3,14:17:21.26:318,21,0	0/0:10,0:28:48.06:0,48,290	0/0:6,0:19:34.06:0,34,174	0/0:3,0:9:11.50:0,12,58	0/0:0,0:4:11.48:0,11,62	0/0:3,0:13:34.42:0,34,201	0/0:1,0:9:22.68:0,23,112	1/1:2,19:21:56.86:483,57,0	0/0:25,0:25:69.19:0,69,763	0/0:7,0:29:46.41:0,46,242	0/0:4,0:23:40.14:0,40,205
chr10	45830498	.	TTACGAACC	T	10538.73	PASS	AB=0.957;AC=21;AF=0.375;AN=56;BaseQRankSum=14.280;DP=595;FS=5.023;HRun=0;HaplotypeScore=183.9402;InbreedingCoeff=0.9189;MQ=88.19;MQ0=0;MQRankSum=-16.195;QD=56.66;ReadPosRankSum=-0.037;VQSLOD=4.5272;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,102,4360	1/1:2,5:7:12.04:344,12,0	0/0:27,0:27:75.24:0,75,2943	0/0:21,0:21:63.05:0,63,2207	1/1:2,11:13:27.05:708,27,0	1/1:0,15:15:33.11:947,33,0	1/1:5,21:26:51.18:1413,51,0	0/0:22,0:22:63.22:0,63,2586	0/1:21,1:22:22.83:23,0,2524	1/1:2,19:21:57.15:1394,57,0	1/1:0,22:22:57.15:1537,57,0	0/0:23,0:23:66.21:0,66,2537	0/0:19,0:19:54.19:0,54,2314	0/0:20,0:20:60.21:0,60,2668	1/1:3,21:24:57.20:1617,57,0	1/1:0,15:15:42.14:1191,42,0	0/0:24,0:24:72.23:0,72,3092	1/1:1,10:11:24.08:689,24,0	0/0:26,0:26:75.16:0,75,2946	0/0:20,0:19:48.16:0,48,2016	0/0:29,0:29:84.29:0,84,3519	0/0:20,0:19:57.20:0,57,2459	0/0:18,0:18:54.19:0,54,2390	0/0:37,0:37:99:0,111,4894	1/1:0,10:10:27.05:676,27,0	0/0:22,0:22:63.22:0,63,2647	0/0:35,0:35:99:0,105,4162	0/0:10,0:10:30.10:0,30,1340
chr10	45831005	.	C	CTTTT	5165.37	PASS	AB=0.825;AC=45;AF=0.804;AN=56;BaseQRankSum=-1.895;DP=561;FS=18.487;HRun=21;HaplotypeScore=143.9637;InbreedingCoeff=0.2591;MQ=73.74;MQ0=8;MQRankSum=0.468;QD=11.71;ReadPosRankSum=-0.713;VQSLOD=-0.5994;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:41,0:41:35.84:448,36,0	0/1:4,0:7:12.39:12,0,66	0/0:52,0:18:6.73:0,7,57	0/0:46,0:22:1.11:0,1,3	1/1:23,0:23:15.80:281,16,0	0/1:8,0:12:5.78:6,0,45	0/1:12,0:14:21.34:22,0,21	0/1:18,0:32:13.23:249,0,13	1/1:9,0:9:15.03:193,15,0	1/1:21,4:26:29.50:355,29,0	1/1:10,0:17:35.90:380,36,0	1/1:17,0:17:20.79:218,21,0	1/1:16,0:16:16.75:197,17,0	1/1:14,0:14:27.02:373,27,0	1/1:11,0:11:11.87:175,12,0	1/1:14,0:14:14.96:199,15,0	0/0:20,0:20:2.01:0,2,32	1/1:11,0:11:13.12:117,13,0	1/1:14,0:20:23.90:256,24,0	1/1:12,0:23:28.14:415,28,0	1/1:15,0:15:32.90:390,33,0	1/1:7,5:14:16.17:165,16,0	1/1:17,7:24:26.74:364,27,0	0/1:6,0:16:20.37:26,0,20	1/1:10,0:10:14.96:142,15,0	1/1:8,0:13:13.88:83,14,0	1/1:14,0:28:3.71:80,4,0	1/1:6,0:10:4.61:18,5,0
chr10	45831284	.	A	ACT	9935.10	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=10.422;DP=545;FS=13.058;HRun=0;HaplotypeScore=86.5871;InbreedingCoeff=0.9959;MQ=90.47;MQ0=0;MQRankSum=-9.538;QD=54.00;ReadPosRankSum=3.021;VQSLOD=4.6895;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:81.26:0,81,1289	1/1:0,9:9:24.08:480,24,0	0/0:31,0:31:77.27:0,77,1143	0/0:30,0:30:87.03:0,87,1408	1/1:1,21:22:51.17:1034,51,0	1/1:1,27:28:78.27:1560,78,0	1/1:1,18:20:48.16:973,48,0	0/0:41,0:41:99:0,117,1844	0/0:22,0:22:63.20:0,63,1004	1/1:3,14:17:51.17:1009,51,0	1/1:1,22:23:66.23:1328,66,0	0/0:19,0:19:54.18:0,54,851	0/0:15,0:15:42.11:0,42,644	0/0:13,0:13:36.12:0,36,577	1/1:1,18:20:53.98:1081,54,0	1/1:0,23:23:63.22:1260,63,0	0/0:18,0:18:51.17:0,51,832	1/1:1,6:7:18.06:366,18,0	0/0:10,0:10:27.08:0,27,403	0/0:21,0:21:63.19:0,63,972	0/0:20,0:20:60.15:0,60,926	0/0:16,0:16:48.14:0,48,735	0/0:15,0:15:39.13:0,39,636	0/0:16,0:16:48.16:0,48,783	1/1:0,15:15:42.14:843,42,0	0/0:20,0:20:57.18:0,57,905	0/0:21,0:21:63.21:0,63,1011	0/0:5,0:5:15.05:0,15,239
chr10	45831404	.	ATAAGTCCT	A	11522.08	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=14.958;DP=456;FS=0.000;HRun=0;HaplotypeScore=181.3074;InbreedingCoeff=0.9715;MQ=91.45;MQ0=1;MQRankSum=-15.864;QD=74.34;ReadPosRankSum=3.492;VQSLOD=4.7291;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:60.21:0,60,2427	1/1:1,9:10:27.09:774,27,0	0/0:31,0:31:80.24:0,80,2957	0/0:18,0:17:36.09:0,36,1242	1/1:2,12:14:33.11:946,33,0	1/1:0,17:17:48.16:1375,48,0	1/1:2,9:11:21.07:551,21,0	0/0:35,0:35:99:0,102,4461	0/0:16,0:16:24.08:0,24,962	1/1:2,22:24:63.22:1808,63,0	1/1:2,18:20:54.19:1547,54,0	0/0:16,0:16:45.15:0,45,1951	0/0:13,0:13:39.13:0,39,1635	0/0:10,0:10:30.10:0,30,1271	1/1:3,19:22:57.20:1599,57,0	1/1:1,24:25:69.24:1978,69,0	0/0:14,0:14:42.14:0,42,1860	1/1:0,1:1:3.01:86,3,0	0/0:11,0:11:33.11:0,33,1449	0/0:12,0:12:36.12:0,36,1573	0/0:15,0:15:45.15:0,45,1978	0/0:8,0:8:24.08:0,24,1060	0/0:9,0:9:27.09:0,27,1143	0/0:15,0:15:21.07:0,21,900	1/1:0,11:11:30.10:860,30,0	0/0:15,0:15:45.15:0,45,2012	0/0:25,0:24:69.24:0,69,3041	0/0:16,0:16:45.15:0,45,1914
chr10	45831437	.	T	TG	7150.62	PASS	AB=0.844;AC=48;AF=0.857;AN=56;BaseQRankSum=1.245;DP=556;FS=5.496;HRun=1;HaplotypeScore=172.4500;InbreedingCoeff=0.6292;MQ=62.83;MQ0=21;MQRankSum=-1.948;QD=15.25;ReadPosRankSum=7.924;VQSLOD=4.7279;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:23:26.01:323,26,0	1/1:6,6:12:22.01:240,22,0	0/0:48,0:17:26.50:0,27,224	0/1:40,0:20:0.11:0,0,65	1/1:16,9:23:5.22:244,5,0	1/1:9,17:24:47.96:546,48,0	1/1:4,4:8:6.75:156,7,0	1/1:27,0:28:54.86:486,55,0	1/1:4,10:13:2.93:27,3,0	1/1:17,10:25:32.88:438,33,0	1/1:12,10:20:45.79:398,46,0	1/1:16,0:16:25.35:310,25,0	1/1:8,0:8:20.84:167,21,0	1/1:7,0:8:23.36:203,23,0	1/1:14,13:27:38.57:461,39,0	1/1:15,9:24:8.79:367,9,0	0/0:23,0:21:42.94:0,43,303	0/1:6,5:11:14.91:147,0,15	1/1:19,0:17:20.64:261,21,0	1/1:16,0:15:33.90:221,34,0	1/1:15,0:12:30.35:287,30,0	1/1:11,0:11:28.94:210,29,0	1/1:12,0:11:29.94:252,30,0	0/0:3,13:15:1.74:0,2,6	1/1:3,15:17:39.98:431,40,0	1/1:13,1:14:26.83:248,27,0	1/1:25,0:24:61.88:487,62,0	1/1:15,0:14:17.53:242,18,0
chr10	45831444	.	T	TG	418.55	PASS	AB=0.702;AC=12;AF=0.214;AN=56;BaseQRankSum=12.116;DP=651;FS=3.580;HRun=0;HaplotypeScore=195.0211;InbreedingCoeff=0.1880;MQ=57.63;MQ0=31;MQRankSum=-8.234;QD=1.94;ReadPosRankSum=10.112;VQSLOD=1.5890;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:26:57.96:0,58,472	0/1:6,6:12:20.11:34,0,20	0/0:69,0:19:10.43:0,10,218	0/0:56,0:20:20.04:0,20,131	0/1:19,9:26:30.18:30,0,50	0/1:10,17:25:7.94:80,0,8	0/1:6,4:10:7.10:25,0,7	0/0:25,0:25:56.20:0,56,481	0/0:15,0:14:16.72:0,17,122	0/1:21,10:29:55.94:61,0,56	0/1:13,10:21:32.55:36,0,33	0/0:15,0:15:37.21:0,37,278	0/0:13,0:13:32.57:0,33,259	0/0:13,0:13:35.61:0,36,279	0/1:16,13:29:18.54:41,0,19	0/1:14,9:23:41.29:49,0,41	0/0:27,0:25:66.53:0,67,503	1/1:7,5:12:21.07:100,21,0	0/0:20,0:17:44.53:0,45,360	0/0:24,0:23:62.60:0,63,522	0/0:18,0:15:17.97:0,18,259	0/0:13,0:12:35.36:0,35,307	0/0:13,0:12:32.93:0,33,282	0/0:15,0:14:10.18:0,10,112	1/1:6,15:20:28.66:126,29,0	0/0:17,1:18:40.65:0,41,370	0/0:30,0:29:80.15:0,80,677	0/0:23,0:18:44.35:0,44,392
chr10	45831460	.	T	TTTG	5118.98	PASS	AB=0.978;AC=22;AF=0.393;AN=56;BaseQRankSum=9.719;DP=633;FS=43.195;HRun=0;HaplotypeScore=182.8425;InbreedingCoeff=0.8478;MQ=57.13;MQ0=29;MQRankSum=-7.968;QD=16.67;ReadPosRankSum=10.286;VQSLOD=2.3347;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:20:41.07:0,41,305	1/1:6,5:11:16.29:285,16,0	0/1:60,0:13:1.33:1,0,117	0/0:58,0:19:2.75:0,3,61	1/1:21,7:26:58.30:575,58,0	1/1:18,14:30:50.17:827,50,0	1/1:9,3:12:16.90:233,17,0	0/0:19,0:19:41.84:0,42,347	0/0:17,0:16:21.83:0,22,170	1/1:30,6:34:45.13:660,45,0	1/1:14,7:21:24.63:479,25,0	0/0:12,0:12:19.41:0,19,157	0/0:13,0:13:28.69:0,29,204	0/0:9,0:9:23.66:0,24,188	1/1:18,9:27:31.96:629,32,0	1/1:16,7:23:20.16:450,20,0	0/0:27,0:25:54.33:0,54,365	1/1:9,4:13:30.97:322,31,0	0/0:17,0:15:29.58:0,30,220	0/0:23,0:22:46.38:0,46,377	0/0:16,0:13:29.11:0,29,234	0/0:10,0:9:23.84:0,24,202	0/0:11,0:10:15.75:0,16,118	0/0:13,0:12:14.82:0,15,134	1/1:8,13:20:36.83:644,37,0	0/1:21,1:22:14.04:14,0,312	0/0:29,0:28:49.20:0,49,363	0/0:30,0:25:52.73:0,53,452
chr10	45832018	.	ATCTGTGTGTGTGTG	A	2811.88	PASS	AB=1.000;AC=22;AF=0.393;AN=56;BaseQRankSum=8.916;DP=672;FS=1.039;HRun=0;HaplotypeScore=242.5759;InbreedingCoeff=0.3519;MQ=61.14;MQ0=39;MQRankSum=-2.183;QD=9.34;ReadPosRankSum=1.910;VQSLOD=2.5702;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:16:20.68:0,21,163	0/1:11,0:10:42.82:43,0,325	0/0:41,0:24:36.28:0,36,499	0/0:52,0:31:73.38:0,73,662	1/1:2,24:26:10.21:253,10,0	0/1:17,0:15:44.69:81,0,45	0/0:4,0:34:3.62:0,4,10	0/0:24,0:21:61.07:0,61,464	0/0:18,0:18:20.20:0,20,130	1/1:4,30:32:56.99:732,57,0	1/1:1,18:18:3.01:106,3,0	0/1:23,0:21:51.95:145,0,52	0/1:18,0:17:99:130,0,143	0/0:17,0:17:19.92:0,20,136	1/1:19,2:20:23.83:384,24,0	1/1:0,23:23:2.58:126,3,0	0/0:28,0:27:73.65:0,74,2102	1/1:8,0:6:17.88:134,18,0	0/0:23,0:22:51.70:0,52,412	0/0:28,0:26:31.36:0,31,250	0/0:36,0:33:50.52:0,51,390	0/0:28,0:28:34.93:0,35,293	0/0:24,0:24:24.25:0,24,236	0/1:25,0:24:0.98:1,0,104	1/1:11,4:16:30.03:621,30,0	0/1:22,0:20:7.26:7,0,369	0/1:20,0:20:35.76:36,0,260	0/1:16,0:15:99:200,0,167
chr10	45832020	.	CTGTGTGTGTGTGTGTGTGTGTGTGTG	C	2398.47	PASS	AB=0.871;AC=24;AF=0.429;AN=56;BaseQRankSum=2.157;DP=670;FS=11.744;HRun=0;HaplotypeScore=345.2678;InbreedingCoeff=0.5553;MQ=59.22;MQ0=46;MQRankSum=-0.412;QD=7.89;ReadPosRankSum=1.462;VQSLOD=1.0223;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:15:2.99:25,3,0	0/0:12,0:10:21.07:0,21,1534	0/1:40,0:23:0:0,0,0	0/0:51,0:30:3.01:0,3,64	0/0:26,0:25:4.91:0,5,125	0/0:19,0:16:4.60:0,5,303	0/0:36,0:34:6.02:0,6,334	0/0:25,0:22:15.05:0,15,477	1/1:12,4:16:3.01:112,3,0	0/0:34,0:32:40.26:0,40,1062	0/0:20,0:18:3.01:0,3,73	1/1:11,11:20:6.02:403,6,0	1/1:13,4:16:6.02:403,6,0	1/1:13,4:17:5.11:222,5,0	0/0:20,0:19:15.05:0,15,388	0/0:23,0:23:3.48:0,3,52	0/0:24,0:27:54.14:0,54,4328	0/0:9,0:6:9.03:0,9,162	1/1:16,5:20:12.02:186,12,0	1/1:16,13:26:4.78:116,5,0	1/1:36,0:32:2.99:25,3,0	1/1:19,8:28:0.47:1,0,0	0/1:17,9:24:96.99:122,0,97	0/0:16,8:23:0:0,0,0	0/0:16,0:16:18.06:0,18,401	0/0:23,0:20:36.11:0,36,1490	1/1:19,0:20:6.01:231,6,0	1/1:11,5:14:12.04:722,12,0
chr10	45834279	.	GGGT	G	2396.74	PASS	AB=0.944;AC=31;AF=0.554;AN=56;BaseQRankSum=0.524;DP=402;FS=46.009;HRun=0;HaplotypeScore=62.3209;InbreedingCoeff=0.2657;MQ=68.52;MQ0=3;MQRankSum=-1.833;QD=8.41;ReadPosRankSum=1.590;VQSLOD=0.9922;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:15,0:15:69.91:72,0,70	0/0:5,0:5:12.04:0,12,179	0/1:9,0:8:55.52:56,0,77	0/0:14,0:12:21.01:0,21,239	1/1:4,1:5:3.47:26,3,0	0/0:19,0:19:44.97:0,45,601	0/0:30,0:30:71.66:0,72,1197	0/0:15,0:15:32.09:0,32,230	0/1:11,0:11:39.92:40,0,61	1/1:12,0:11:23.72:203,24,0	1/1:2,1:3:5.30:51,5,0	0/1:23,0:23:87.18:87,0,166	0/1:16,0:16:2.21:2,0,65	0/1:15,1:16:56:137,0,56	1/1:1,14:15:26.72:365,27,0	1/1:5,9:14:21.06:318,21,0	0/0:26,0:26:26.85:0,27,346	1/1:3,23:26:32.86:464,33,0	1/1:4,13:17:38.47:344,38,0	0/0:3,0:3:3.01:0,3,33	0/1:8,34:42:25.87:122,0,26	1/1:3,0:3:2.98:21,3,0	0/1:2,0:2:20.57:21,0,27	0/1:21,0:21:2.57:3,0,14	1/1:7,6:12:9.47:116,9,0	0/0:5,0:5:11.11:0,11,55	1/1:3,9:12:2.48:44,2,0	1/1:1,7:8:6.02:91,6,0
chr10	45834280	.	GGT	G	2073.95	PASS	AB=0.967;AC=39;AF=0.696;AN=56;BaseQRankSum=4.960;DP=396;FS=24.995;HRun=0;HaplotypeScore=58.8277;InbreedingCoeff=0.4327;MQ=70.15;MQ0=3;MQRankSum=0.230;QD=6.91;ReadPosRankSum=1.613;VQSLOD=1.4296;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:16,0:16:6.58:165,0,7	0/0:5,0:5:11.99:0,12,125	0/1:11,0:8:21.20:21,0,102	0/0:15,0:13:23.68:0,24,229	1/1:5,0:5:3:26,3,0	0/0:19,0:19:41.99:0,42,468	0/0:27,1:28:56.65:0,57,841	0/1:15,0:15:11.44:11,0,102	1/1:11,1:12:6.02:119,6,0	1/1:10,2:11:20.68:161,21,0	1/1:4,0:4:8.26:51,8,0	1/1:21,1:22:12.75:188,13,0	1/1:17,0:17:25.32:202,25,0	1/1:16,0:16:21.50:149,21,0	1/1:15,0:15:26.55:187,27,0	1/1:14,0:14:20.51:146,21,0	0/0:26,0:26:26.93:0,27,273	1/1:25,0:25:32.53:231,33,0	1/1:15,0:15:38.35:264,38,0	0/0:3,0:3:2.92:0,3,17	1/1:40,0:40:9.14:63,9,0	1/1:3,0:3:2.98:21,3,0	0/1:2,0:2:11.13:21,0,11	1/1:20,1:21:9.16:78,9,0	1/1:11,0:11:8.91:60,9,0	0/1:4,1:5:21.28:29,0,21	1/1:10,0:10:2.93:21,3,0	1/1:8,0:8:5.95:42,6,0
chr10	45834281	.	GT	G	2445.51	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=3.023;DP=379;FS=5.060;HRun=1;HaplotypeScore=51.3364;InbreedingCoeff=0.7509;MQ=71.36;MQ0=3;MQRankSum=-3.386;QD=9.41;ReadPosRankSum=0.848;VQSLOD=1.1995;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,3:15:17.89:226,18,0	0/0:4,0:4:8.08:0,8,55	0/0:11,0:8:1.35:0,1,98	0/0:14,0:13:23.88:0,24,203	1/1:4,0:5:2.86:25,3,0	0/0:18,0:18:17.46:0,17,280	0/0:28,0:28:34.27:0,34,628	0/0:15,0:15:33.94:0,34,213	1/1:8,4:12:29.74:255,30,0	1/1:9,0:10:20.53:136,21,0	1/1:5,0:5:11.16:71,11,0	1/1:18,1:20:56.40:414,56,0	1/1:12,4:16:40.20:302,40,0	1/1:13,2:15:35.61:256,36,0	1/1:15,0:15:25.86:140,26,0	1/1:9,0:12:20.13:106,20,0	0/0:24,0:24:27.29:0,27,217	1/1:25,0:25:31.55:166,32,0	1/1:15,0:15:37.92:241,38,0	1/1:2,1:3:0.89:2,1,0	1/1:37,0:38:8.62:46,9,0	1/1:1,2:3:2.98:21,3,0	1/1:2,0:2:3.89:28,4,0	1/1:1,18:19:11.93:110,12,0	1/1:8,0:10:8.41:42,8,0	0/0:5,0:5:5.70:0,6,55	1/1:10,0:10:2.88:15,3,0	1/1:7,0:8:5.75:30,6,0
chr10	45836002	.	TA	T	1303.20	PASS	AB=0.933;AC=39;AF=0.886;AN=44;BaseQRankSum=-0.178;DP=103;FS=24.988;HRun=3;HaplotypeScore=36.4701;InbreedingCoeff=0.0741;MQ=75.04;MQ0=0;MQRankSum=-2.402;QD=14.81;ReadPosRankSum=1.335;VQSLOD=1.5296;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,2:3:3.01:36,3,0	1/1:1,0:1:3.01:30,3,0	0/1:5,0:4:2.11:2,0,58	0/1:4,0:4:0:0,0,0	./.	1/1:0,1:1:3.01:34,3,0	1/1:0,5:5:8.99:92,9,0	1/1:0,8:8:24.07:280,24,0	1/1:1,2:1:3.01:36,3,0	1/1:2,7:9:18.06:215,18,0	./.	1/1:2,3:4:12.03:136,12,0	1/1:2,4:5:6.02:66,6,0	1/1:2,2:4:9.03:103,9,0	1/1:0,1:1:3.01:36,3,0	1/1:2,2:3:6.02:66,6,0	0/1:3,1:4:15.95:24,0,16	./.	./.	1/1:2,3:3:6.01:62,6,0	./.	1/1:2,0:2:3.01:31,3,0	1/1:2,2:2:3.01:32,3,0	0/0:2,0:2:0.47:0,0,1	1/1:4,3:6:5.97:49,6,0	1/1:2,1:3:3.01:31,3,0	1/1:1,2:3:3.01:36,3,0	./.
chr10	45836004	.	A	ACC	654.97	PASS	AB=0.875;AC=34;AF=0.810;AN=42;BaseQRankSum=1.125;DP=83;FS=16.675;HRun=0;HaplotypeScore=39.5188;InbreedingCoeff=0.1848;MQ=77.58;MQ0=0;MQRankSum=-1.762;QD=9.78;ReadPosRankSum=0.318;VQSLOD=1.2041;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,1:2:2.90:16,3,0	1/1:0,1:1:3.01:42,3,0	0/1:4,0:3:0.04:0,0,70	0/0:4,0:4:2.74:0,3,12	./.	0/0:1,0:1:0.47:0,0,1	1/1:5,0:5:6.76:38,7,0	1/1:8,0:8:7.73:66,8,0	0/0:2,1:1:0:0,0,0	1/1:8,0:8:2.66:7,3,0	./.	1/1:3,1:4:8.62:70,9,0	1/1:4,1:4:5.91:57,6,0	1/1:2,1:3:5.60:77,6,0	1/1:1,0:1:3.01:36,3,0	1/1:2,1:2:3.01:42,3,0	0/1:2,1:3:17.99:35,0,18	./.	./.	1/1:3,2:3:6.02:82,6,0	./.	1/1:0,1:1:3.01:41,3,0	1/1:2,2:2:3.01:41,3,0	./.	1/1:3,1:3:5.98:62,6,0	1/1:1,1:2:3.01:41,3,0	1/1:2,0:2:0.47:1,0,0	./.
chr10	45836007	.	T	TCCC	602.27	PASS	AB=0.783;AC=21;AF=0.457;AN=46;BaseQRankSum=4.369;DP=86;FS=5.546;HRun=2;HaplotypeScore=39.9591;InbreedingCoeff=0.2609;MQ=76.39;MQ0=0;MQRankSum=-1.479;QD=15.06;ReadPosRankSum=4.438;VQSLOD=0.9428;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:2,1:2:0.47:0,0,1	1/1:0,1:1:3.01:55,3,0	0/0:4,0:3:7.26:0,7,82	0/0:4,0:4:5.98:0,6,57	./.	0/0:1,0:1:2.37:0,2,8	0/0:5,0:5:2.84:0,3,9	0/0:8,0:8:12.58:0,13,39	0/0:2,1:1:2.22:0,2,7	0/0:8,0:8:12.77:0,13,38	./.	0/1:4,1:4:6.36:46,0,6	0/1:4,1:4:1.57:49,0,2	0/1:2,1:3:1.29:51,0,1	0/0:1,0:1:0.47:0,0,1	0/1:2,1:2:1.60:50,0,2	0/1:2,1:3:10.95:49,0,11	./.	./.	1/1:3,2:3:6.02:108,6,0	1/1:2,0:1:3.01:54,3,0	1/1:0,1:1:3.01:54,3,0	1/1:2,2:2:3.01:53,3,0	1/1:1,1:2:3.01:53,3,0	1/1:3,1:3:3.01:54,3,0	1/1:1,1:2:3.01:55,3,0	0/0:2,0:2:2.03:0,2,6	./.
chr10	45836016	.	T	TC	460.54	PASS	AB=0.500;AC=29;AF=0.853;AN=34;BaseQRankSum=1.777;DP=63;FS=17.076;HRun=5;HaplotypeScore=31.9769;InbreedingCoeff=0.1758;MQ=81.86;MQ0=0;MQRankSum=-2.725;QD=12.45;ReadPosRankSum=1.303;VQSLOD=0.8169;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	1/1:0,0:1:3.01:36,3,0	0/0:4,0:2:2.75:0,3,33	0/0:4,0:4:5.56:0,6,31	./.	./.	./.	1/1:4,1:5:3.01:38,3,0	./.	./.	./.	1/1:1,2:2:3.01:39,3,0	1/1:2,1:3:3.01:38,3,0	1/1:2,1:3:3.01:38,3,0	./.	1/1:1,0:2:3.01:37,3,0	1/1:0,0:1:3.01:37,3,0	./.	1/1:2,0:2:3:25,3,0	1/1:2,2:3:6.02:76,6,0	1/1:1,1:1:3.01:40,3,0	1/1:0,1:1:3.01:38,3,0	1/1:1,2:1:3.01:38,3,0	0/1:0,2:2:0:0,0,0	1/1:2,0:2:3.01:37,3,0	1/1:1,0:2:3.01:37,3,0	./.	./.
chr10	45836022	.	C	CTG	700.92	PASS	AC=26;AF=0.765;AN=34;BaseQRankSum=1.827;DP=33;FS=9.031;HRun=0;HaplotypeScore=26.4724;InbreedingCoeff=0.1924;MQ=101.10;MQ0=2;MQRankSum=-2.709;QD=38.94;ReadPosRankSum=0.945;VQSLOD=4.3976;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	1/1:0,1:1:3.01:56,3,0	0/0:5,0:2:0.89:0,1,2	0/0:3,0:3:5.99:0,6,48	./.	./.	./.	1/1:0,1:1:3.01:57,3,0	./.	./.	./.	1/1:0,2:1:3.01:56,3,0	1/1:0,1:1:3.01:56,3,0	1/1:0,1:1:3.01:56,3,0	./.	1/1:0,1:1:3.01:57,3,0	1/1:0,1:1:3.01:56,3,0	./.	0/0:1,1:2:0:0,0,0	1/1:0,2:2:6.02:112,6,0	1/1:2,1:1:3.01:56,3,0	1/1:0,1:1:3.01:56,3,0	1/1:0,2:1:3.01:56,3,0	0/0:0,2:2:0:0,0,0	1/1:0,1:1:3.01:56,3,0	1/1:0,1:1:3.01:57,3,0	./.	./.
chr10	45838126	.	TATATATATATATATATATATATATATATATAC	T	1201.03	PASS	AB=1.000;AC=14;AF=0.389;AN=36;BaseQRankSum=-0.297;DP=182;FS=1.920;HRun=0;HaplotypeScore=123.8182;InbreedingCoeff=0.4062;MQ=51.22;MQ0=11;MQRankSum=2.533;QD=16.23;ReadPosRankSum=2.926;VQSLOD=2.4744;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:13:24.03:366,24,0	0/0:1,0:1:3.01:0,3,253	0/0:8,0:4:6.01:0,6,83	0/0:23,0:4:7.82:0,8,89	./.	0/0:3,0:3:3.01:0,3,83	0/0:3,0:3:3.01:0,3,75	0/0:13,0:13:39.12:0,39,1417	1/1:7,0:7:12.04:314,12,0	./.	./.	1/1:3,0:3:3.01:73,3,0	1/1:2,10:12:2.41:66,2,0	./.	./.	./.	0/0:17,0:15:36.10:0,36,2689	0/0:14,0:13:33.06:0,33,1944	0/1:17,0:16:36.92:264,0,37	0/0:3,0:3:2.97:0,3,20	0/1:12,0:12:24.31:38,0,24	./.	1/1:5,0:5:6.02:117,6,0	1/1:5,0:5:5.89:98,6,0	./.	./.	0/0:4,0:4:2.77:0,3,33	./.
chr10	45838128	.	TATATATATATATATATATATATATATATAC	T	1479.79	PASS	AC=18;AF=0.529;AN=34;BaseQRankSum=3.120;DP=180;FS=1.769;HRun=0;HaplotypeScore=127.2458;InbreedingCoeff=0.6450;MQ=51.07;MQ0=11;MQRankSum=2.828;QD=19.22;ReadPosRankSum=2.528;VQSLOD=2.1293;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:13:17.34:87,17,0	0/0:1,0:1:3.01:0,3,225	0/0:8,0:4:6.01:0,6,86	0/0:23,0:4:2.10:0,2,41	./.	0/0:3,0:3:3.01:0,3,65	0/0:3,0:3:3.01:0,3,73	0/0:14,0:14:42.12:0,42,1352	1/1:7,0:7:11.77:168,12,0	./.	./.	1/1:3,0:3:3.01:37,3,0	1/1:12,0:12:3.01:30,3,0	./.	./.	./.	0/0:17,0:15:33.58:0,34,2437	0/0:14,0:13:30.07:0,30,1789	1/1:1,15:15:45.08:853,45,0	./.	1/1:12,0:12:18.03:295,18,0	./.	1/1:5,0:5:5.50:44,6,0	1/1:5,0:5:5.45:25,5,0	./.	./.	1/1:4,0:4:5.57:78,6,0	./.
chr10	45838679	.	GACT	G	41.74	PASS	AB=0.906;AC=6;AF=0.115;AN=52;BaseQRankSum=4.237;DP=277;FS=10.444;HRun=0;HaplotypeScore=39.1377;InbreedingCoeff=0.0018;MQ=48.20;MQ0=19;MQRankSum=-3.746;QD=0.72;ReadPosRankSum=-2.113;VQSLOD=-0.3268;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:3:5.49:0,5,146	0/1:2,0:2:13.36:13,0,37	1/1:11,0:1:2.04:6,2,0	0/1:17,0:2:4.02:4,0,68	0/0:2,0:2:5.98:0,6,94	0/1:6,1:7:30.26:30,0,263	0/1:14,7:18:91.04:91,0,684	0/0:8,0:1:2.80:0,3,13	0/0:4,0:3:9.03:0,9,219	0/0:11,0:5:15.04:0,15,279	0/0:3,0:2:6.02:0,6,147	0/0:16,0:14:42.14:0,42,1033	0/0:7,0:6:18.06:0,18,442	0/0:14,0:13:39.13:0,39,899	0/0:7,0:6:18.06:0,18,443	0/0:7,0:5:15.05:0,15,368	0/0:25,0:25:53.31:0,53,1585	0/0:25,0:25:60.21:0,60,1595	0/0:12,0:1:3.01:0,3,74	0/0:5,0:3:9.02:0,9,173	0/0:25,0:18:41.87:0,42,984	0/0:2,0:2:3:0,3,25	./.	0/0:24,0:24:68.36:0,68,1471	./.	0/0:10,0:5:15.05:0,15,363	0/0:1,0:1:3.01:0,3,74	0/0:2,0:2:5.99:0,6,48
chr10	45840083	.	A	AACACAC	5720.51	PASS	AC=44;AF=0.846;AN=52;BaseQRankSum=2.892;DP=538;FS=2.483;HRun=0;HaplotypeScore=154.2451;InbreedingCoeff=0.6813;MQ=51.69;MQ0=10;MQRankSum=-6.039;QD=13.62;ReadPosRankSum=-5.908;VQSLOD=2.3335;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:32,0:35:9.03:200,9,0	0/0:8,0:8:12.84:0,13,184	./.	./.	1/1:9,3:14:9.02:269,9,0	0/0:17,0:19:36.11:0,36,677	0/0:23,0:25:16.31:0,16,439	1/1:23,0:22:6.02:189,6,0	1/1:14,0:16:13.10:211,13,0	1/1:13,5:18:23.21:480,23,0	1/1:10,3:15:8.96:192,9,0	1/1:12,1:18:9.03:206,9,0	1/1:15,0:18:3.01:96,3,0	1/1:18,0:18:9.02:118,9,0	1/1:10,6:16:24.08:616,24,0	1/1:8,9:22:25.96:692,26,0	0/0:20,0:26:40.27:0,40,742	1/1:9,1:14:12.04:320,12,0	1/1:21,0:20:12.97:266,13,0	1/1:14,0:14:9.02:141,9,0	1/1:19,0:26:2.92:9,3,0	1/1:16,0:17:2.99:28,3,0	1/1:14,0:18:9.03:171,9,0	1/1:22,0:24:11.50:194,12,0	1/1:12,3:19:9.03:232,9,0	1/1:9,4:16:27.09:516,27,0	1/1:24,0:29:20.76:497,21,0	1/1:2,0:2:3.01:78,3,0
chr10	45840324	.	T	TTC	10463.68	PASS	AB=0.563;AC=38;AF=0.679;AN=56;BaseQRankSum=-8.678;DP=493;FS=20.657;HRun=0;HaplotypeScore=58.1247;InbreedingCoeff=0.8472;MQ=69.67;MQ0=9;MQRankSum=-0.657;QD=30.87;ReadPosRankSum=4.464;VQSLOD=4.2577;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,29:31:57.17:964,57,0	0/0:4,0:3:8.98:0,9,91	0/0:23,0:10:26.41:0,26,278	0/0:17,0:10:20.89:0,21,220	1/1:3,11:16:41.85:582,42,0	0/0:14,0:14:42:0,42,518	0/0:11,0:11:33.11:0,33,503	0/0:27,0:27:72.15:0,72,910	1/1:0,13:13:18.06:305,18,0	1/1:2,18:20:54.09:739,54,0	1/1:4,12:19:38.53:474,39,0	1/1:1,12:13:27.09:451,27,0	1/1:0,8:8:15.05:250,15,0	1/1:0,14:14:27.09:453,27,0	1/1:1,15:16:30.02:474,30,0	1/1:3,18:21:27.07:456,27,0	0/0:40,0:40:99:0,102,1398	1/1:2,16:18:39.13:651,39,0	1/1:4,14:19:46.98:588,47,0	1/1:2,13:17:41.92:619,42,0	1/1:1,12:14:30.09:508,30,0	0/1:3,9:12:3.40:314,0,3	1/1:1,18:20:33.16:516,33,0	1/1:0,19:18:39.13:658,39,0	1/1:0,15:15:27.09:457,27,0	0/0:18,0:18:44.61:0,45,548	1/1:3,19:23:47.87:771,48,0	0/1:2,8:10:16.48:233,0,16
chr10	45840325	.	T	TC	3580.82	PASS	AB=0.951;AC=37;AF=0.661;AN=56;BaseQRankSum=8.854;DP=481;FS=22.094;HRun=0;HaplotypeScore=68.9927;InbreedingCoeff=0.6984;MQ=69.81;MQ0=12;MQRankSum=0.361;QD=11.02;ReadPosRankSum=7.448;VQSLOD=1.8483;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:32,0:32:17.93:291,18,0	0/0:4,0:3:8.99:0,9,89	0/0:24,0:10:26.36:0,26,245	0/0:19,0:10:20.57:0,21,203	1/1:15,1:16:32.10:247,32,0	0/0:14,0:14:42.08:0,42,525	0/0:11,0:11:33.11:0,33,459	0/0:25,0:25:72.13:0,72,861	1/1:12,0:12:17.65:106,18,0	1/1:18,0:18:17:264,17,0	1/1:17,1:19:4.80:174,5,0	1/1:13,1:13:26.20:152,26,0	1/1:8,0:8:14.59:85,15,0	1/1:14,0:14:26.36:155,26,0	1/1:16,0:16:17.25:147,17,0	1/1:19,0:19:4.35:134,4,0	0/0:40,0:40:99:0,111,1388	1/1:18,0:18:37.78:220,38,0	0/1:14,1:15:14.37:179,0,14	1/1:15,1:16:24.65:284,25,0	1/1:14,0:14:8.21:152,8,0	0/1:10,1:11:20.51:117,0,21	1/1:20,0:20:30.63:180,31,0	1/1:17,0:16:38.21:229,38,0	1/1:15,0:15:26.44:158,26,0	0/0:19,0:19:46.54:0,47,565	1/1:21,0:21:23.53:237,24,0	0/1:10,0:10:21.65:68,0,22
chr10	45840417	.	C	CT	4720.81	PASS	AB=0.602;AC=28;AF=0.500;AN=56;BaseQRankSum=-6.360;DP=426;FS=1.355;HRun=9;HaplotypeScore=47.4940;InbreedingCoeff=0.7086;MQ=61.36;MQ0=4;MQRankSum=0.472;QD=21.17;ReadPosRankSum=-1.028;VQSLOD=4.8351;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:6,16:22:4.74:416,0,5	1/1:2,5:6:12.03:133,12,0	0/0:14,0:7:17.20:0,17,137	0/0:12,0:6:8.99:0,9,78	0/0:10,0:10:14.97:0,15,130	0/1:7,7:14:2.02:196,0,2	1/1:6,24:31:51.86:744,52,0	0/0:26,0:27:61.98:0,62,520	1/1:6,11:17:45.04:460,45,0	0/0:18,0:18:29.97:0,30,260	0/0:12,0:13:29.02:0,29,240	1/1:4,12:16:42.11:458,42,0	1/1:2,10:12:4.03:273,4,0	1/1:5,10:14:27.06:291,27,0	0/0:17,0:17:41.99:0,42,365	0/0:12,0:13:35.03:0,35,292	0/0:32,0:33:83.78:0,84,711	0/0:21,1:22:50.96:0,51,441	1/1:3,7:10:26.92:267,27,0	1/1:3,9:12:30.07:322,30,0	0/1:5,10:15:45.12:219,0,45	1/1:5,4:10:14.83:134,15,0	1/1:8,3:11:14.84:134,15,0	0/1:2,7:9:28.32:175,0,28	0/0:7,0:7:15:0,15,130	0/0:17,0:17:32.97:0,33,286	1/1:6,12:18:39.06:411,39,0	1/1:1,2:3:9:90,9,0
chr10	45840721	.	CG	C	425.50	PASS	AB=0.950;AC=7;AF=0.135;AN=52;BaseQRankSum=-2.728;DP=331;FS=24.763;HRun=10;HaplotypeScore=65.6941;InbreedingCoeff=0.1731;MQ=82.53;MQ0=0;MQRankSum=0.296;QD=5.39;ReadPosRankSum=3.124;VQSLOD=0.1782;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:1.54:0,2,71	./.	0/1:14,1:15:49.51:50,0,106	0/0:17,0:18:7.42:0,7,208	./.	0/0:13,0:13:18.01:0,18,185	0/0:25,0:25:40.32:0,40,482	0/1:13,4:17:8.47:89,0,8	0/0:21,0:21:42.37:0,42,364	0/0:2,0:2:0:0,0,0	0/0:3,0:3:0.94:0,1,2	0/0:17,0:17:26.74:0,27,252	0/0:12,0:12:16.43:0,16,261	0/0:16,0:16:14.73:0,15,201	0/0:8,0:8:3.46:0,3,26	0/0:7,0:7:4.71:0,5,29	0/0:30,0:30:78.05:0,78,781	0/0:6,0:6:7.49:0,7,46	0/0:11,0:11:17.91:0,18,145	0/0:7,0:7:9.01:0,9,91	0/1:10,0:10:5.90:6,0,25	0/1:7,0:7:5.91:6,0,19	0/1:11,0:12:3.74:4,0,80	0/0:15,0:15:9.14:0,9,180	0/0:3,0:3:3.48:0,3,34	1/1:3,14:17:44.99:390,45,0	0/0:12,0:12:15.03:0,15,157	0/0:10,0:10:11.24:0,11,193
chr10	45840731	.	GA	G	1145.22	PASS	AB=0.938;AC=28;AF=0.519;AN=54;BaseQRankSum=-3.038;DP=296;FS=0.000;HRun=2;HaplotypeScore=54.3061;InbreedingCoeff=-0.0814;MQ=88.53;MQ0=0;MQRankSum=-0.724;QD=5.67;ReadPosRankSum=-2.704;VQSLOD=-0.4433;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:6,1:7:13.58:43,0,14	0/0:1,0:1:0:0,0,0	0/0:20,0:18:22.87:0,23,297	0/0:20,0:21:35.87:0,36,446	./.	0/1:10,0:10:27.95:32,0,28	0/1:29,1:30:33.26:190,0,33	0/0:14,0:14:22.73:0,23,210	0/1:15,0:15:7.51:8,0,28	1/1:3,0:3:8.91:66,9,0	1/1:2,0:2:5.98:46,6,0	0/1:14,0:14:10.26:104,0,10	0/1:10,1:11:31.39:41,0,31	0/1:14,1:15:13.74:89,0,14	1/1:6,0:6:5.99:49,6,0	1/1:6,0:6:9.57:86,10,0	0/0:34,0:34:99:0,99,1195	0/1:3,0:3:7.33:16,0,7	0/1:5,0:9:8.72:20,0,9	0/0:4,0:4:4.86:0,5,19	1/1:7,1:9:8.37:110,8,0	1/1:1,1:2:2.58:38,3,0	0/1:9,1:10:8.26:52,0,8	0/1:13,1:14:6.10:120,0,6	0/1:2,0:2:0.97:19,0,1	1/1:15,1:16:4.03:124,4,0	0/1:9,0:9:13.34:33,0,13	0/1:8,1:9:19.29:19,0,44
chr10	45841390	.	CTATT	C	1168.79	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=6.987;DP=624;FS=7.910;HRun=0;HaplotypeScore=107.1289;InbreedingCoeff=0.8553;MQ=60.99;MQ0=0;MQRankSum=0.744;QD=22.05;ReadPosRankSum=0.921;VQSLOD=2.7092;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:61.87:0,62,1697	1/1:1,10:11:18.06:342,18,0	0/1:15,0:15:1.31:1,0,572	0/0:5,0:5:4.67:0,5,123	0/0:40,0:40:99:0,120,3159	1/1:0,15:15:27.09:512,27,0	1/1:0,12:12:24.08:455,24,0	0/0:41,0:41:99:0,120,3134	0/0:18,0:18:48.12:0,48,1193	0/0:41,0:41:99:0,117,3089	0/0:33,0:33:93.32:0,93,2417	0/0:34,0:34:99:0,99,2240	0/0:20,0:20:57.15:0,57,1448	0/0:12,0:12:36.12:0,36,838	0/0:18,0:18:51.17:0,51,1197	0/0:13,0:13:39.10:0,39,941	0/0:32,0:32:93.16:0,93,2230	0/0:33,0:33:90.26:0,90,2216	0/0:11,0:11:33.11:0,33,841	0/0:25,0:25:69.24:0,69,1832	0/0:23,0:23:66.23:0,66,1757	0/0:6,0:6:18.06:0,18,449	0/0:27,0:27:81.26:0,81,2088	0/0:13,0:13:36.08:0,36,911	0/0:24,0:24:69.22:0,69,1766	0/0:26,0:26:78.26:0,78,1994	0/0:36,0:36:96.33:0,96,2494	0/0:14,0:13:39.10:0,39,993
chr10	45841516	.	CTATCTAT	C	14206.91	PASS	AB=0.612;AC=38;AF=0.679;AN=56;BaseQRankSum=11.407;DP=608;FS=5.891;HRun=0;HaplotypeScore=198.1772;InbreedingCoeff=0.7950;MQ=52.28;MQ0=0;MQRankSum=-13.401;QD=33.04;ReadPosRankSum=3.778;VQSLOD=4.0968;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:7,18:25:26.37:499,0,26	0/0:13,0:13:30.09:0,30,905	0/0:16,0:15:30.09:0,30,708	0/0:6,0:4:6.02:0,6,210	1/1:11,22:32:17.98:350,18,0	0/0:26,0:26:39.12:0,39,1294	0/0:13,0:13:39.11:0,39,1164	0/0:45,0:45:93.29:0,93,2762	1/1:2,19:21:30.10:668,30,0	1/1:9,18:27:60.18:1333,60,0	1/1:2,23:25:32.83:539,33,0	1/1:2,17:19:42.14:837,42,0	1/1:5,18:23:51.17:1129,51,0	1/1:4,16:20:36.59:749,37,0	1/1:6,19:25:45.11:973,45,0	1/1:9,10:19:42.06:839,42,0	0/0:27,0:27:54.17:0,54,1763	1/1:7,12:19:27.02:594,27,0	1/1:9,4:11:21.06:459,21,0	1/1:12,18:29:45:844,45,0	1/1:3,3:6:6:94,6,0	1/1:2,6:8:9.03:177,9,0	1/1:5,16:21:18.06:396,18,0	1/1:4,14:18:8.81:111,9,0	1/1:3,25:27:54.19:1163,54,0	0/0:32,0:32:75.25:0,75,2600	1/1:8,33:41:99:2266,102,0	0/1:4,5:9:7.23:187,0,7
chr10	45841523	.	T	TC	310.87	PASS	AB=0.971;AC=10;AF=0.179;AN=56;BaseQRankSum=6.585;DP=605;FS=0.000;HRun=0;HaplotypeScore=214.4681;InbreedingCoeff=-0.1854;MQ=50.61;MQ0=0;MQRankSum=-6.887;QD=1.55;ReadPosRankSum=-5.340;VQSLOD=1.2670;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:26,1:27:6.75:7,0,124	0/0:12,0:12:36.12:0,36,504	0/0:20,0:18:48.15:0,48,653	0/0:10,0:6:12.95:0,13,129	0/0:29,0:28:40.45:0,40,366	0/0:23,0:23:57.18:0,57,780	0/0:15,0:15:45.14:0,45,613	0/0:45,0:45:99:0,129,1775	0/0:20,0:20:8.74:0,9,114	0/1:28,0:28:99:136,0,262	0/0:26,0:26:40.95:0,41,399	0/1:18,0:18:29.61:30,0,216	0/1:23,0:23:43.47:43,0,178	0/0:19,0:19:25.06:0,25,258	0/1:25,0:25:15.02:15,0,186	0/1:19,0:19:76.39:76,0,268	0/0:25,0:25:60.20:0,60,839	0/1:18,0:18:29.45:29,0,133	0/1:15,0:13:58.76:59,0,123	0/0:29,0:28:58.65:0,59,550	0/0:9,0:9:8.67:0,9,76	0/0:8,0:8:11.71:0,12,86	0/0:19,0:19:19.80:0,20,111	0/1:18,0:18:6.94:41,0,7	0/0:27,0:26:50.93:0,51,300	0/0:30,0:30:90.29:0,90,1229	0/0:39,0:39:48.19:0,48,487	0/1:6,3:9:16.36:16,0,69
chr10	45841549	.	CATCT	C	4285.10	PASS	AB=0.745;AC=40;AF=0.769;AN=52;BaseQRankSum=6.079;DP=636;FS=1.615;HRun=0;HaplotypeScore=242.0385;InbreedingCoeff=0.7322;MQ=45.65;MQ0=6;MQRankSum=-2.230;QD=8.54;ReadPosRankSum=-1.262;VQSLOD=3.8733;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:25,8:30:29.83:376,30,0	0/0:9,0:9:21.06:0,21,405	./.	./.	1/1:15,0:22:13.01:41,13,0	1/1:10,11:21:18.06:280,18,0	1/1:13,4:19:19.85:300,20,0	0/0:44,0:43:12.04:0,12,158	0/0:25,0:25:27.09:0,27,632	1/1:21,0:30:14.88:263,15,0	1/1:18,0:23:6.85:23,7,0	1/1:15,7:22:27.09:419,27,0	1/1:19,5:24:21.07:318,21,0	1/1:17,1:18:11.96:157,12,0	1/1:12,0:24:30.73:144,31,0	1/1:8,0:21:24.93:172,25,0	1/1:11,19:30:36.12:560,36,0	0/1:15,0:18:11.37:22,0,11	1/1:8,0:14:9.57:64,10,0	1/1:17,0:36:12.04:81,12,0	0/1:4,0:13:0:0,0,0	1/1:7,5:12:18.06:279,18,0	1/1:13,10:23:27.09:418,27,0	1/1:15,5:20:9.03:134,9,0	1/1:25,0:28:18.01:163,18,0	0/0:24,0:24:33.10:0,33,639	1/1:30,0:45:8.85:70,9,0	0/0:4,0:7:0.47:0,0,1
chr10	45841797	.	C	CT	6814.86	PASS	AB=0.603;AC=38;AF=0.679;AN=56;BaseQRankSum=4.911;DP=681;FS=4.792;HRun=10;HaplotypeScore=95.1360;InbreedingCoeff=0.8467;MQ=71.00;MQ0=2;MQRankSum=-3.204;QD=14.02;ReadPosRankSum=1.620;VQSLOD=5.1222;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,0:36:62.72:316,63,0	0/0:10,0:10:26.97:0,27,222	0/0:20,0:16:18.31:0,18,187	0/0:13,0:13:22.90:0,23,161	1/1:5,20:25:29.43:493,29,0	0/0:21,2:23:12.94:0,13,313	0/0:29,0:29:68.88:0,69,563	0/0:34,0:34:52.33:0,52,588	1/1:2,3:21:34.64:212,35,0	1/1:7,19:27:32.32:525,32,0	0/1:11,15:26:69.11:348,0,69	1/1:2,0:25:45.56:229,46,0	1/1:6,2:26:57.08:306,57,0	1/1:4,1:17:21.45:151,21,0	1/1:2,32:34:69.17:736,69,0	1/1:7,24:31:25.90:679,26,0	0/0:30,0:30:74.88:0,75,616	0/1:7,20:28:4.92:553,0,5	1/1:8,1:24:27.31:254,27,0	1/1:5,0:21:21.04:205,21,0	1/1:6,0:19:36.45:184,36,0	1/1:2,1:16:25.77:146,26,0	1/1:0,1:20:45.76:238,46,0	1/1:2,1:21:45.76:247,46,0	1/1:4,13:19:35.76:348,36,0	0/0:33,1:35:47.92:0,48,590	1/1:16,1:40:91.87:526,92,0	1/1:1,0:10:22.91:119,23,0
chr10	45842199	.	CG	C	4099.32	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=0.748;DP=390;FS=2.772;HRun=6;HaplotypeScore=61.6582;InbreedingCoeff=0.9640;MQ=69.47;MQ0=3;MQRankSum=-1.849;QD=17.90;ReadPosRankSum=2.586;VQSLOD=3.4195;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:18,2:20:39.27:289,39,0	0/0:10,0:10:26.19:0,26,156	0/0:21,2:12:18.35:0,18,147	0/0:21,2:16:13.37:0,13,96	1/1:7,6:13:31.39:311,31,0	0/0:11,0:11:26.42:0,26,181	0/0:21,1:22:12.33:0,12,225	0/0:26,0:26:48.05:0,48,530	1/1:9,1:10:25.99:183,26,0	1/1:13,4:17:38.67:320,39,0	1/1:5,4:9:18.01:172,18,0	1/1:9,0:10:23.15:171,23,0	1/1:10,0:10:23.73:176,24,0	1/1:8,0:8:17.82:130,18,0	1/1:3,3:6:12.02:122,12,0	1/1:0,5:5:12.03:128,12,0	0/0:34,0:34:73.57:0,74,752	1/1:13,8:21:34.26:370,34,0	1/1:13,2:15:16.05:226,16,0	1/1:8,0:8:14.96:118,15,0	1/1:12,0:12:20.80:160,21,0	1/1:8,0:8:14.91:113,15,0	1/1:8,0:8:20.96:169,21,0	1/1:17,0:17:44.50:342,44,0	1/1:3,5:8:18:174,18,0	0/0:12,0:12:31.16:0,31,281	1/1:10,1:11:18.74:157,19,0	1/1:13,0:13:35.73:268,36,0
chr10	45842204	.	GGA	G	4875.56	PASS	AB=0.898;AC=35;AF=0.625;AN=56;BaseQRankSum=2.432;DP=435;FS=5.162;HRun=0;HaplotypeScore=78.6020;InbreedingCoeff=0.2854;MQ=68.93;MQ0=3;MQRankSum=-0.697;QD=16.25;ReadPosRankSum=6.230;VQSLOD=4.0561;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:12,11:24:46.85:454,47,0	0/1:11,0:11:15.03:15,0,33	0/0:26,0:15:15.36:0,15,241	0/0:27,0:20:5.95:0,6,135	0/1:13,3:16:67.42:167,0,67	0/1:12,0:12:13.45:13,0,74	1/1:21,0:21:0.92:47,1,0	0/0:27,0:27:77.18:0,77,938	1/1:7,5:12:31.68:341,32,0	0/1:17,1:19:5.64:221,0,6	0/1:13,1:14:81.26:81,0,95	1/1:7,3:10:29.83:305,30,0	1/1:5,4:9:21.68:234,22,0	1/1:3,4:7:20.81:191,21,0	1/1:5,0:5:8.97:45,9,0	0/0:10,0:10:7.89:0,8,72	0/0:30,0:30:84.25:0,84,1175	0/1:20,0:20:69.55:93,0,70	1/1:15,4:20:8.90:318,9,0	1/1:7,5:12:23.83:243,24,0	0/1:7,3:11:14.42:217,0,14	0/1:5,3:10:0.42:191,0,0	1/1:6,5:11:11.99:266,12,0	1/1:11,6:18:47.01:569,47,0	0/1:12,0:12:29.68:30,0,81	0/0:15,0:15:24.45:0,24,442	1/1:6,5:11:28.07:293,28,0	1/1:4,11:15:44.88:541,45,0
chr10	45842205	.	GAA	G	1867.47	PASS	AB=0.984;AC=24;AF=0.429;AN=56;BaseQRankSum=1.265;DP=446;FS=4.339;HRun=13;HaplotypeScore=92.1371;InbreedingCoeff=0.2463;MQ=69.43;MQ0=2;MQRankSum=1.993;QD=7.98;ReadPosRankSum=6.975;VQSLOD=1.0133;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:23:20.32:128,0,20	1/1:4,5:11:19.24:205,19,0	0/0:24,0:15:18.91:0,19,226	0/0:25,0:21:20.18:0,20,210	0/0:22,0:21:0.51:0,1,419	1/1:6,6:12:20.93:193,21,0	1/1:3,18:21:34.14:397,34,0	0/0:29,0:29:68.29:0,68,839	0/1:13,0:13:3.92:96,0,4	0/1:20,0:20:5.65:6,0,263	0/0:15,0:15:15.21:0,15,345	1/1:8,0:10:6.04:88,6,0	0/1:10,0:10:22.38:74,0,22	1/1:7,0:7:3.24:34,3,0	0/0:4,0:5:11.58:0,12,75	0/0:10,0:10:26.93:0,27,279	0/0:28,0:31:64.14:0,64,854	0/0:20,0:20:42.17:0,42,387	0/1:19,0:19:61.05:61,0,79	0/1:11,0:12:31.58:38,0,32	0/1:10,0:10:64.34:64,0,65	0/1:11,0:11:61.33:78,0,61	0/1:11,0:11:66.09:70,0,66	1/1:18,0:18:15.39:206,15,0	0/0:12,0:12:29.92:0,30,303	0/0:16,0:16:7.36:0,7,336	0/1:10,1:11:1.79:114,0,2	1/1:15,0:15:24.48:203,24,0
chr10	45842254	.	CAAA	C	3724.54	PASS	AB=0.843;AC=38;AF=0.679;AN=56;BaseQRankSum=5.153;DP=416;FS=2.157;HRun=16;HaplotypeScore=101.9554;InbreedingCoeff=0.6348;MQ=69.71;MQ0=4;MQRankSum=-5.940;QD=14.05;ReadPosRankSum=7.111;VQSLOD=1.8462;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,10:20:11.15:249,11,0	0/0:7,0:7:17.87:0,18,225	0/0:21,0:14:18.94:0,19,124	0/1:18,0:13:12.91:13,0,50	1/1:10,10:21:18.61:298,19,0	0/0:12,0:18:32.78:0,33,396	0/0:25,0:29:67.24:0,67,835	0/0:29,0:28:48.59:0,49,709	0/1:6,3:10:43.15:122,0,43	1/1:6,8:14:29.88:303,30,0	1/1:3,8:15:14.49:173,14,0	0/1:7,0:7:8.07:64,0,8	1/1:6,2:8:1.23:41,1,0	1/1:3,5:8:20.99:210,21,0	1/1:3,7:10:23.98:249,24,0	1/1:4,6:10:24.01:252,24,0	0/0:25,0:28:63.62:0,64,887	1/1:6,5:11:24.45:249,24,0	1/1:10,5:16:18.08:226,18,0	1/1:7,4:14:11.52:142,12,0	1/1:6,3:10:9.15:79,9,0	0/1:8,4:12:1.86:99,0,2	1/1:6,7:14:7.64:237,8,0	1/1:8,2:10:11.06:109,11,0	1/1:3,5:9:21.01:215,21,0	0/0:17,0:17:39.09:0,39,555	1/1:6,3:9:9.78:97,10,0	1/1:7,8:15:31.41:299,31,0
chr10	45842278	.	G	GA	6989.69	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=0.705;DP=482;FS=14.944;HRun=7;HaplotypeScore=85.6841;InbreedingCoeff=0.9790;MQ=59.83;MQ0=5;MQRankSum=-3.407;QD=23.07;ReadPosRankSum=0.114;VQSLOD=3.5305;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,17:25:42.04:481,42,0	0/0:8,0:8:24.04:0,24,232	0/0:15,0:8:10.24:0,10,90	0/0:21,0:10:14.12:0,14,169	1/1:5,15:19:35.89:390,36,0	0/0:13,0:13:29.21:0,29,267	0/0:33,0:33:69:0,69,660	0/0:42,0:40:72.03:0,72,692	1/1:0,13:13:35.98:396,36,0	1/1:2,12:13:27.08:326,27,0	1/1:2,12:14:33.01:372,33,0	1/1:3,5:8:12.04:145,12,0	1/1:4,12:15:30.28:322,30,0	1/1:1,12:13:32.69:372,33,0	1/1:3,10:13:32.78:357,33,0	1/1:2,8:10:24.07:285,24,0	0/0:27,0:26:50.09:0,50,470	1/1:6,8:14:18.06:217,18,0	1/1:4,14:18:41.79:485,42,0	1/1:7,11:17:38.70:398,39,0	1/1:4,10:14:18.44:200,18,0	1/1:2,10:12:24.05:276,24,0	1/1:3,14:16:39.03:449,39,0	1/1:6,7:13:21.06:249,21,0	1/1:5,11:16:30.09:360,30,0	0/0:20,0:20:44.73:0,45,422	1/1:3,12:15:29.80:362,30,0	1/1:4,16:19:40.75:551,41,0
chr10	45842318	.	GGT	G	545.39	PASS	AB=0.893;AC=22;AF=0.458;AN=48;BaseQRankSum=1.749;DP=461;FS=3.153;HRun=0;HaplotypeScore=81.1438;InbreedingCoeff=0.5260;MQ=65.09;MQ0=6;MQRankSum=0.965;QD=3.10;ReadPosRankSum=-0.444;VQSLOD=2.0559;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:26:21.03:0,21,243	./.	./.	0/0:27,0:21:2.04:0,2,6	0/0:16,0:16:6.02:0,6,86	1/1:6,0:7:4.66:19,5,0	1/1:24,0:25:1.49:4,1,0	./.	0/0:19,0:20:21.01:0,21,247	0/0:11,0:11:3:0,3,28	0/0:12,0:12:6:0,6,66	1/1:3,2:5:6.01:64,6,0	1/1:11,1:12:3.01:32,3,0	1/1:14,3:16:12.02:121,12,0	0/0:10,0:11:15.03:0,15,180	0/0:10,0:12:21.04:0,21,252	0/1:16,6:21:99:125,0,238	0/0:17,0:18:21.82:0,22,307	0/0:16,0:15:3:0,3,27	1/1:8,0:8:2.99:25,3,0	0/0:25,0:25:12.04:0,12,173	1/1:11,3:14:9.49:97,9,0	1/1:12,0:14:8.69:60,9,0	1/1:9,3:16:14.54:133,15,0	0/1:17,0:18:13.88:14,0,160	1/1:16,0:17:2.84:14,3,0	./.	0/0:12,0:12:15.03:0,15,198
chr10	45843029	.	C	CT	11107.28	PASS	AC=38;AF=0.704;AN=54;BaseQRankSum=-4.967;DP=399;FS=1.318;HRun=1;HaplotypeScore=49.3926;InbreedingCoeff=0.9778;MQ=70.57;MQ0=0;MQRankSum=-3.223;QD=41.29;ReadPosRankSum=5.871;VQSLOD=4.7066;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,24:26:72.24:1077,72,0	0/0:10,0:10:30.07:0,30,372	0/0:12,0:12:33.02:0,33,377	0/0:5,0:5:10.44:0,10,132	1/1:2,24:26:69.17:1007,69,0	0/0:19,0:19:48.16:0,48,623	0/0:14,0:14:42.12:0,42,530	0/0:29,0:29:78.25:0,78,1001	1/1:0,10:10:30.10:450,30,0	1/1:0,17:17:51.16:742,51,0	1/1:1,21:22:60.16:874,60,0	1/1:0,7:7:21.07:315,21,0	1/1:1,6:7:18.06:269,18,0	1/1:1,5:6:12.04:180,12,0	1/1:0,16:16:48.16:719,48,0	1/1:0,8:8:24.08:360,24,0	0/0:21,0:21:57.15:0,57,710	1/1:0,22:22:60.20:899,60,0	1/1:0,13:13:36.12:533,36,0	1/1:0,18:18:54.18:806,54,0	1/1:0,9:9:24.08:360,24,0	./.	1/1:0,6:6:18.06:270,18,0	1/1:0,4:4:12.04:180,12,0	1/1:0,23:23:63.21:944,63,0	0/0:20,0:20:57.17:0,57,715	1/1:1,15:16:45.15:674,45,0	1/1:0,13:13:30.10:449,30,0
chr10	45844999	.	AG	A	2287.85	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=7.024;DP=662;FS=3.861;HRun=1;HaplotypeScore=66.5760;InbreedingCoeff=0.9987;MQ=92.02;MQ0=0;MQRankSum=-0.934;QD=36.90;ReadPosRankSum=0.844;VQSLOD=4.0941;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,102,1551	1/1:0,12:12:33.11:460,33,0	0/0:30,0:30:86.88:0,87,1278	0/0:24,1:25:62.73:0,63,872	0/0:22,0:22:63.15:0,63,968	1/1:0,22:22:66.22:923,66,0	1/1:0,28:28:75.25:1048,75,0	0/0:32,0:32:87.30:0,87,1381	0/0:18,0:18:54.15:0,54,815	0/0:26,0:26:75.24:0,75,1174	0/0:10,0:10:30.10:0,30,478	0/0:30,0:30:90.31:0,90,1438	0/0:11,0:11:33.11:0,33,527	0/0:17,0:17:48.13:0,48,719	0/0:29,0:29:84.29:0,84,1341	0/0:26,0:26:78.25:0,78,1223	0/0:40,0:40:99:0,120,1866	0/0:29,0:29:87.27:0,87,1356	0/0:27,0:27:81.24:0,81,1222	0/0:14,0:14:39.13:0,39,614	0/0:44,0:44:99:0,126,1986	0/0:19,0:19:51.15:0,51,785	0/0:17,0:17:51.17:0,51,814	0/0:30,0:30:90.31:0,90,1436	0/0:10,0:10:30.10:0,30,475	0/0:34,0:34:99:0,102,1580	0/0:17,0:16:51.09:0,51,760	0/0:8,0:8:24.08:0,24,383
chr10	45845725	.	TTGA	T	4664.25	PASS	AC=18;AF=0.333;AN=54;BaseQRankSum=7.254;DP=738;FS=0.885;HRun=0;HaplotypeScore=132.3825;InbreedingCoeff=0.9148;MQ=60.37;MQ0=10;MQRankSum=1.190;QD=19.27;ReadPosRankSum=0.011;VQSLOD=4.3460;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:49.91:0,50,978	0/0:1,0:1:3.01:0,3,56	0/0:29,0:18:9.87:0,10,115	0/0:29,0:22:11.93:0,12,169	1/1:5,7:12:21.07:285,21,0	0/0:20,0:31:8.56:0,9,93	0/0:28,0:31:17.42:0,17,209	1/1:25,8:31:21.05:265,21,0	0/0:30,0:30:54.19:0,54,1049	1/1:14,19:33:54.11:695,54,0	1/1:7,7:14:14.96:162,15,0	0/0:41,0:41:87.30:0,87,1654	0/0:41,0:41:84.29:0,84,1631	0/0:24,0:24:42.14:0,42,814	1/1:11,17:28:41.98:571,42,0	1/1:9,27:34:69.23:938,69,0	0/0:29,0:29:45.15:0,45,864	1/1:7,12:19:30.10:408,30,0	0/0:15,0:15:2.97:0,3,20	0/0:12,0:22:23.28:0,23,265	./.	0/0:17,0:17:30.10:0,30,571	0/0:18,0:18:39.13:0,39,758	0/0:50,0:50:99:0,102,1951	1/1:9,16:25:33.11:448,33,0	1/1:19,23:42:69.18:893,69,0	0/0:15,0:20:24.08:0,24,341	0/0:8,0:8:15.02:0,15,199
chr10	45846121	.	G	GT	6331.64	PASS	AB=1.000;AC=27;AF=0.482;AN=56;BaseQRankSum=-6.707;DP=558;FS=14.307;HRun=7;HaplotypeScore=58.4927;InbreedingCoeff=0.9207;MQ=60.07;MQ0=0;MQRankSum=-2.149;QD=24.93;ReadPosRankSum=-0.218;VQSLOD=3.8854;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,31:39:74.73:842,75,0	0/0:8,0:8:23.93:0,24,211	0/1:14,0:14:22.62:23,0,163	0/0:9,0:9:10.49:0,10,126	0/0:31,0:31:78.10:0,78,747	0/0:23,0:22:65.99:0,66,606	0/0:24,0:24:63.06:0,63,599	0/0:33,0:33:81.10:0,81,773	1/1:1,17:18:48.15:579,48,0	0/0:23,1:24:26.76:0,27,519	0/0:26,0:24:54.08:0,54,521	1/1:1,20:21:51.16:615,51,0	1/1:5,16:21:48.15:575,48,0	1/1:1,9:10:24.01:271,24,0	0/0:20,0:20:47.92:0,48,430	0/0:12,0:12:29.98:0,30,273	0/0:29,0:29:86.98:0,87,808	0/0:22,0:22:54.07:0,54,516	1/1:1,19:20:54.05:620,54,0	1/1:0,24:24:54.06:617,54,0	1/1:1,8:9:21.06:254,21,0	1/1:3,12:15:30.02:343,30,0	1/1:1,13:14:21.06:253,21,0	1/1:1,17:18:36.11:434,36,0	0/0:20,0:20:50.93:0,51,464	0/0:22,0:22:57.08:0,57,545	1/1:2,19:21:54.17:651,54,0	1/1:1,9:9:23.95:254,24,0
chr10	45846754	.	GCTGA	G	13209.35	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=15.368;DP=595;FS=0.664;HRun=0;HaplotypeScore=129.3022;InbreedingCoeff=0.9952;MQ=91.10;MQ0=0;MQRankSum=-10.795;QD=42.61;ReadPosRankSum=0.912;VQSLOD=5.3986;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,41:45:99:1806,102,0	1/1:0,6:6:15.05:276,15,0	0/0:27,0:27:67.11:0,67,1614	0/0:27,0:27:69.17:0,69,1730	0/0:18,0:18:48.16:0,48,1237	1/1:0,15:15:39.13:686,39,0	1/1:5,20:25:51.17:894,51,0	0/0:21,0:21:63.22:0,63,1661	1/1:1,19:20:54.13:957,54,0	0/0:22,0:22:63.22:0,63,1638	0/0:9,0:9:18.06:0,18,468	1/1:2,16:18:45.15:825,45,0	1/1:1,14:15:39.13:715,39,0	1/1:1,16:17:45.15:824,45,0	0/0:25,0:25:72.22:0,72,1793	0/0:22,0:22:63.22:0,63,1657	0/0:29,0:29:78.27:0,78,2050	0/0:30,0:30:87.28:0,87,2203	1/1:1,18:19:57.20:1046,57,0	1/1:1,11:12:30.10:546,30,0	1/1:2,29:31:84.29:1468,84,0	1/1:1,12:13:30.55:487,31,0	1/1:0,7:7:18.06:312,18,0	1/1:13,25:38:57.19:1044,57,0	0/0:21,0:21:57.20:0,57,1498	0/0:34,0:34:93.32:0,93,2433	1/1:2,17:19:45.15:827,45,0	1/1:0,10:10:27.09:496,27,0
chr10	45847951	.	GTTT	G	19753.67	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=15.177;DP=805;FS=11.392;HRun=3;HaplotypeScore=128.0214;InbreedingCoeff=0.9754;MQ=89.45;MQ0=0;MQRankSum=-6.684;QD=45.10;ReadPosRankSum=3.654;VQSLOD=3.5848;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,43:43:96.29:1754,96,0	1/1:0,12:11:23.41:445,23,0	0/0:36,0:37:92.29:0,92,2288	0/0:33,0:33:92.96:0,93,1870	0/0:34,0:34:99:0,102,2466	1/1:0,15:15:39.13:727,39,0	1/1:0,35:35:96.33:1789,96,0	0/0:30,0:30:87.30:0,87,2134	1/1:2,26:28:81.24:1475,81,0	0/0:32,0:32:96.33:0,96,2331	0/0:19,0:19:57.20:0,57,1405	1/1:0,39:39:99:1902,102,0	1/1:0,38:38:89.99:1678,90,0	1/1:0,23:23:57.19:1044,57,0	0/0:28,0:28:84.29:0,84,2071	0/0:28,0:28:84.29:0,84,2073	0/0:44,0:43:99:0,132,3219	0/0:27,0:27:81.26:0,81,1912	1/1:0,23:23:69.18:1206,69,0	1/1:0,26:24:51.17:951,51,0	1/1:0,45:45:99:1845,100,0	1/1:0,13:13:33.11:615,33,0	1/1:0,22:22:44.95:838,45,0	1/1:0,33:33:75.73:1399,76,0	0/0:19,0:19:57.20:0,57,1405	0/0:36,0:36:99:0,108,2590	1/1:0,42:42:99:2031,111,0	1/1:0,1:1:3.01:56,3,0
chr10	45848848	.	A	ATT	7559.96	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-0.677;DP=479;FS=4.001;HRun=8;HaplotypeScore=69.2119;InbreedingCoeff=0.9921;MQ=74.11;MQ0=2;MQRankSum=-1.980;QD=35.00;ReadPosRankSum=2.977;VQSLOD=5.0078;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,27:31:78.22:1210,78,0	0/0:1,0:6:13.72:0,14,60	0/0:13,0:13:14.97:0,15,149	0/0:13,0:12:23.22:0,23,224	0/0:22,0:22:60.15:0,60,658	0/0:2,0:15:24.69:0,25,108	0/0:1,0:15:32.93:0,33,144	0/0:33,0:33:84.22:0,84,936	1/1:4,6:10:21.07:323,21,0	0/0:20,0:20:42.09:0,42,461	0/0:17,0:17:36.08:0,36,393	1/1:1,19:20:45.15:714,45,0	1/1:3,13:16:27.09:429,27,0	1/1:4,10:15:30.10:475,30,0	0/0:14,0:14:36.09:0,36,401	0/0:13,0:13:33.08:0,33,368	0/0:21,0:21:53.77:0,54,566	0/0:17,0:17:39.05:0,39,421	1/1:3,19:24:68.17:985,68,0	1/1:2,15:17:45.09:634,45,0	1/1:2,13:15:30.10:476,30,0	1/1:0,9:9:21.03:306,21,0	1/1:2,13:16:32.90:524,33,0	1/1:3,12:15:33.11:524,33,0	0/0:20,0:20:57.15:0,57,635	0/0:24,0:24:69.15:0,69,750	1/1:3,16:18:42.14:667,42,0	1/1:0,6:7:20.56:294,21,0
chr10	45849416	.	TAGC	T	17470.01	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=20.763;DP=801;FS=4.910;HRun=0;HaplotypeScore=165.6266;InbreedingCoeff=0.9951;MQ=87.19;MQ0=0;MQRankSum=-8.359;QD=39.61;ReadPosRankSum=6.424;VQSLOD=5.2711;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,49:52:99:1934,120,0	1/1:0,7:7:14.76:255,15,0	0/0:34,0:34:99:0,99,2108	0/0:29,0:29:84.27:0,84,1755	0/0:25,0:25:66.20:0,66,1457	1/1:1,22:23:60.20:992,60,0	1/1:3,39:42:99:1874,111,0	0/0:32,0:32:84.29:0,84,1882	1/1:0,30:30:84.28:1386,84,0	0/0:31,0:31:84.29:0,84,1889	0/0:17,0:17:45.15:0,45,1018	1/1:2,27:29:84.29:1399,84,0	1/1:0,27:28:78.27:1329,78,0	1/1:0,41:41:99:1573,99,0	0/0:36,0:36:99:0,108,2451	0/0:41,0:41:99:0,117,2638	0/0:43,0:43:99:0,129,2871	0/0:19,0:19:51.17:0,51,1121	1/1:2,13:15:39.12:627,39,0	1/1:2,23:22:45.15:766,45,0	1/1:0,50:50:99:1891,111,0	1/1:0,15:15:33.11:546,33,0	1/1:1,18:19:24.37:409,24,0	1/1:2,30:32:62.89:1073,63,0	0/0:24,0:24:69.24:0,69,1487	0/0:29,0:29:87.30:0,87,1991	1/1:3,25:28:69.24:1161,69,0	1/1:0,5:5:15.05:255,15,0
chr10	45849686	.	A	ATTCATG	28629.52	PASS	AC=30;AF=0.556;AN=54;BaseQRankSum=-8.662;DP=677;FS=9.166;HRun=0;HaplotypeScore=136.9683;InbreedingCoeff=0.9999;MQ=85.16;MQ0=0;MQRankSum=-20.312;QD=88.09;ReadPosRankSum=-1.091;VQSLOD=6.2335;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,23:29:63.22:2316,63,0	1/1:1,12:13:36.12:1321,36,0	0/0:26,0:24:68.96:0,69,1509	0/0:34,0:33:84.81:0,85,1985	0/0:28,0:28:84.27:0,84,2068	1/1:1,11:14:36.12:1305,36,0	1/1:6,13:24:51.18:1792,51,0	0/0:32,0:32:93.30:0,93,2253	1/1:6,21:30:81.28:2927,81,0	0/0:31,0:31:90.31:0,90,2235	0/0:26,0:26:78.27:0,78,1920	1/1:3,28:34:81.28:3030,81,0	1/1:3,13:20:57.20:2122,57,0	1/1:2,18:23:63.22:2344,63,0	0/0:33,0:33:99:0,99,2423	0/0:29,0:28:84.29:0,84,2131	0/0:34,0:34:96.28:0,96,2336	0/0:23,0:23:69.24:0,69,1744	1/1:15,11:32:90.25:2795,90,0	1/1:4,15:20:51.18:1755,51,0	1/1:4,9:18:33.11:1144,33,0	1/1:4,12:17:42.14:1508,42,0	1/1:4,11:16:39.09:1246,39,0	1/1:1,12:14:36.12:1325,36,0	0/0:23,0:23:66.23:0,66,1628	0/0:33,0:33:99:0,99,2491	1/1:7,12:17:54.10:1700,54,0	./.
chr10	45849802	.	C	CCTAG	23422.25	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=16.201;DP=620;FS=5.673;HRun=0;HaplotypeScore=118.4300;InbreedingCoeff=0.9992;MQ=82.18;MQ0=0;MQRankSum=-11.720;QD=70.55;ReadPosRankSum=3.770;VQSLOD=7.0918;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,34:41:87.30:2479,87,0	1/1:0,8:8:21.07:607,21,0	0/0:21,0:21:57.20:0,57,1156	0/0:22,0:22:51.17:0,51,1025	0/0:35,0:35:99:0,105,2183	1/1:1,19:20:48.16:1366,48,0	1/1:3,9:13:30.10:809,30,0	0/0:31,0:31:90.28:0,90,1714	1/1:1,28:29:84.29:2390,84,0	0/0:24,0:24:69.24:0,69,1447	0/0:12,0:12:36.12:0,36,747	1/1:1,19:22:54.18:1518,54,0	1/1:3,16:19:57.20:1555,57,0	1/1:1,19:21:60.21:1671,60,0	0/0:28,0:28:84.29:0,84,1744	0/0:16,0:16:48.16:0,48,1003	0/0:22,0:22:66.23:0,66,1358	0/0:21,0:21:63.22:0,63,1316	1/1:5,16:21:63.21:1763,63,0	1/1:2,17:22:45.11:1186,45,0	1/1:1,16:18:39.13:1129,39,0	1/1:2,28:31:78.27:2214,78,0	1/1:3,17:21:48.16:1366,48,0	1/1:1,13:14:30.10:856,30,0	0/0:23,0:23:66.23:0,66,1384	0/0:33,0:33:96.33:0,96,2000	1/1:1,15:18:51.18:1470,51,0	1/1:0,12:13:36.12:1041,36,0
chr10	45850949	.	G	GTTTT	5029.17	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=4.505;DP=589;FS=5.012;HRun=14;HaplotypeScore=136.4635;InbreedingCoeff=0.9547;MQ=73.54;MQ0=0;MQRankSum=-7.291;QD=19.57;ReadPosRankSum=-5.540;VQSLOD=1.5612;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:7,2:21:32.97:468,33,0	0/0:12,0:14:32.91:0,33,373	0/0:30,0:21:20.22:0,20,336	0/0:18,0:16:0.31:0,0,93	0/0:31,0:33:72.64:0,73,819	0/0:19,0:21:49.05:0,49,541	0/0:19,0:22:47.49:0,47,514	0/0:19,0:23:38.87:0,39,363	1/1:10,2:24:31.34:496,31,0	0/0:18,0:23:47.22:0,47,522	0/0:15,0:17:30.73:0,31,334	1/1:13,5:21:30.10:517,30,0	1/1:7,9:20:17.83:291,18,0	1/1:14,0:16:25.61:386,26,0	0/0:23,0:26:39.26:0,39,436	0/0:14,0:17:41.84:0,42,406	0/0:20,0:23:42.11:0,42,470	0/0:22,0:23:21.10:0,21,474	1/1:12,0:23:41.78:443,42,0	1/1:7,0:21:46.86:566,47,0	1/1:3,0:12:17.89:181,18,0	1/1:8,2:20:36.06:569,36,0	1/1:6,8:20:21.89:361,22,0	1/1:6,2:27:20.98:309,21,0	0/0:17,0:19:38.67:0,39,420	0/0:17,0:21:12.32:0,12,386	1/1:4,0:16:16.78:170,17,0	1/1:5,0:13:24.83:273,25,0
chr10	45853020	.	TCTCTCCTCTCCTCTC	T	157.79	PASS	AB=1.000;AC=5;AF=0.119;AN=42;BaseQRankSum=2.144;DP=370;FS=8.708;HRun=0;HaplotypeScore=132.2947;InbreedingCoeff=0.2262;MQ=84.28;MQ0=15;MQRankSum=-1.762;QD=5.84;ReadPosRankSum=-1.167;VQSLOD=1.9515;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:18:9.02:0,9,173	0/0:4,0:4:2.99:0,3,23	./.	0/0:58,0:22:0.47:0,0,1	0/0:15,0:14:3.01:0,3,75	0/0:11,0:11:5.38:0,5,83	0/0:7,0:7:6.01:0,6,121	./.	./.	0/0:10,0:11:3.28:0,3,78	0/0:7,0:9:9.02:0,9,123	0/0:11,0:11:2.67:0,3,14	./.	0/0:9,0:9:6.02:0,6,136	1/1:5,0:5:2.04:6,2,0	0/0:7,0:7:3.01:0,3,77	0/0:11,0:11:5.91:0,6,229	0/0:9,0:9:2.99:0,3,24	0/0:12,0:11:0.47:0,0,1	0/1:7,0:7:48.42:48,0,91	0/0:21,0:20:5.99:0,6,50	./.	0/0:10,0:10:3:0,3,25	0/0:11,0:10:0.47:0,0,1	0/0:10,0:11:6.02:0,6,148	1/1:9,6:15:9.03:197,9,0	./.	./.
chr10	45853846	.	G	GCAAAGGAAACACC	11423.08	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-10.268;DP=768;FS=1.012;HRun=0;HaplotypeScore=327.5542;InbreedingCoeff=0.9983;MQ=85.31;MQ0=0;MQRankSum=-12.684;QD=132.83;ReadPosRankSum=-1.894;VQSLOD=4.0811;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,108,3678	1/1:8,8:18:45.15:2405,45,0	0/0:22,0:22:30.07:0,30,927	0/0:29,0:29:57.16:0,57,1789	0/0:19,0:19:48.16:0,48,1830	1/1:19,14:35:81.28:4945,81,0	1/1:21,9:33:72.25:4072,72,0	0/0:32,0:32:69.22:0,69,2242	0/0:22,0:22:54.18:0,54,1968	0/0:41,0:41:99:0,108,3838	0/0:26,0:26:63.22:0,63,2273	0/0:24,0:24:60.19:0,60,2143	0/0:30,0:30:66.21:0,66,2311	0/0:32,0:32:81.25:0,81,2846	0/0:41,0:41:99:0,114,4276	0/0:23,0:23:54.18:0,54,1861	0/0:35,0:35:84.26:0,84,3054	0/0:26,0:26:66.23:0,66,2406	0/0:21,0:21:56.22:0,56,1897	0/0:15,0:15:42.14:0,42,1408	0/0:47,0:47:99:0,126,4491	0/0:13,0:13:36.12:0,36,1292	0/0:20,0:20:57.20:0,57,2138	0/0:34,0:34:81.26:0,81,2881	0/0:23,0:23:66.23:0,66,2398	0/0:29,0:29:72.25:0,72,2743	0/0:26,0:26:63.22:0,63,2081	0/0:8,0:8:21.07:0,21,705
chr10	45855027	.	GTTTTTT	G	7709.41	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-5.201;DP=661;FS=6.618;HRun=10;HaplotypeScore=159.6916;InbreedingCoeff=0.9761;MQ=60.49;MQ0=4;MQRankSum=-10.235;QD=25.44;ReadPosRankSum=0.130;VQSLOD=1.5470;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:3,54:57:75.10:1256,75,0	0/0:10,0:10:27.09:0,27,485	0/0:16,0:12:28.32:0,28,356	0/0:15,0:15:35.69:0,36,635	0/0:30,0:35:87.55:0,88,1201	0/0:19,0:18:48.16:0,48,834	0/0:29,0:30:81.28:0,81,1461	0/0:10,0:27:75.24:0,75,1562	1/1:1,21:22:30.09:544,30,0	0/0:27,0:25:71.54:0,72,785	0/0:15,0:15:35.39:0,35,355	1/1:2,20:22:36.11:700,36,0	1/1:1,15:16:27.09:565,27,0	1/1:1,19:20:33.11:654,33,0	0/0:31,0:31:54.14:0,54,532	0/0:22,0:22:41.47:0,41,442	0/0:27,0:28:78.25:0,78,2207	0/0:24,0:24:41.52:0,42,335	1/1:9,18:22:51.15:844,51,0	1/1:3,26:28:65.83:980,66,0	1/1:2,29:30:12.03:210,12,0	1/1:0,14:13:32.95:546,33,0	1/1:1,9:10:11.70:215,12,0	1/1:3,28:31:29.88:372,30,0	0/0:27,0:27:47.41:0,47,454	0/0:5,0:26:75.12:0,75,1765	1/1:1,19:20:35.96:720,36,0	1/1:1,3:4:6.02:103,6,0
chr10	45855035	.	TTTG	T	3498.26	PASS	AB=1.000;AC=33;AF=0.589;AN=56;BaseQRankSum=9.098;DP=658;FS=23.612;HRun=0;HaplotypeScore=148.1370;InbreedingCoeff=0.3962;MQ=61.85;MQ0=4;MQRankSum=-4.860;QD=7.51;ReadPosRankSum=7.026;VQSLOD=1.2343;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:55,0:55:14.47:31,0,14	1/1:3,8:11:18.06:253,18,0	0/0:18,0:12:9.39:0,9,101	0/1:20,0:16:6.34:6,0,14	1/1:33,0:33:40.01:266,40,0	1/1:2,18:19:39.13:547,39,0	1/1:8,22:30:54.18:758,54,0	0/0:26,0:26:33.10:0,33,479	0/1:23,0:23:18.83:19,0,30	1/1:28,0:26:47.61:342,48,0	1/1:13,0:13:17.71:120,18,0	0/1:22,0:22:23.49:23,0,39	1/1:15,0:15:16.33:48,16,0	1/1:19,0:19:16.35:46,16,0	1/1:32,0:33:37.55:248,38,0	1/1:21,0:21:35.26:251,35,0	0/0:29,0:29:45.10:0,45,1026	1/1:23,0:23:35.63:253,36,0	0/0:27,0:22:8.94:0,9,117	0/1:28,0:27:15.03:15,0,110	0/0:32,0:31:0.77:0,1,32	0/1:15,0:14:12.19:12,0,26	1/1:9,0:9:4.11:11,4,0	0/0:31,0:31:5.33:0,5,76	1/1:27,0:27:32.53:220,33,0	0/0:25,0:25:36.18:0,36,743	0/1:21,0:21:3.93:28,0,4	0/0:4,0:4:0.42:0,0,15
chr10	45855036	.	TTGTTG	T	5924.80	PASS	AB=0.937;AC=20;AF=0.357;AN=56;BaseQRankSum=0.794;DP=654;FS=6.456;HRun=0;HaplotypeScore=154.3856;InbreedingCoeff=0.3262;MQ=61.74;MQ0=4;MQRankSum=-6.921;QD=18.29;ReadPosRankSum=4.965;VQSLOD=3.4880;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:56:14.18:0,14,220	0/0:10,0:10:20.98:0,21,124	0/0:17,0:11:29.78:0,30,378	0/0:19,0:15:28.55:0,29,279	1/1:17,13:31:78.02:1093,78,0	0/0:20,0:19:38.32:0,38,188	0/0:30,0:30:67.61:0,68,412	0/1:25,0:25:99:211,0,696	0/1:23,0:23:2.05:2,0,149	1/1:2,26:26:47.14:1142,47,0	1/1:0,13:13:33.02:504,33,0	0/1:22,0:22:11.35:11,0,111	0/1:16,0:16:23.19:23,0,32	0/1:19,0:19:15.04:19,0,15	1/1:2,30:32:18.32:782,18,0	1/1:2,19:21:13.52:677,14,0	0/0:26,2:28:18.32:0,18,1814	0/1:3,20:23:6.80:715,0,7	0/0:28,0:23:43.50:0,44,475	0/0:29,0:28:11.20:0,11,344	0/0:33,0:32:12.19:0,12,128	0/0:16,0:15:2.01:0,2,105	0/0:9,0:9:0.30:0,0,21	0/0:31,0:31:17.27:0,17,246	1/1:1,24:25:14.42:671,14,0	0/1:24,1:25:56.50:56,0,1186	0/1:21,0:21:17.08:17,0,38	0/0:4,0:4:2.07:0,2,26
chr10	45858053	.	AC	A	11380.61	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=17.301;DP=756;FS=0.555;HRun=3;HaplotypeScore=71.2931;InbreedingCoeff=0.9988;MQ=83.60;MQ0=0;MQRankSum=-6.848;QD=33.37;ReadPosRankSum=2.008;VQSLOD=5.3407;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,49:50:99:1562,126,0	0/0:10,0:10:30.10:0,30,432	0/0:22,0:22:63.07:0,63,827	0/0:20,0:20:50.37:0,50,708	0/0:43,0:43:99:0,126,1809	0/0:17,0:17:51.16:0,51,708	0/0:27,0:27:78.25:0,78,1104	0/0:29,0:29:78.24:0,78,1076	1/1:0,21:21:57.18:707,57,0	0/0:33,0:33:99:0,99,1410	0/0:20,0:20:60.13:0,60,820	1/1:0,24:24:63.20:781,63,0	1/1:0,25:25:69.22:855,69,0	1/1:0,25:25:69.22:855,69,0	0/0:22,0:22:66.22:0,66,950	0/0:22,0:22:66.19:0,66,898	0/0:46,0:46:99:0,135,1941	0/0:35,0:35:99:0,102,1429	1/1:0,24:24:72.18:850,72,0	1/1:1,34:35:99:1201,99,0	1/1:0,20:20:51.16:632,51,0	1/1:0,16:16:48.04:558,48,0	1/1:0,20:20:54.17:666,54,0	1/1:2,38:40:99:1264,102,0	0/0:36,0:36:99:0,108,1535	0/0:33,0:33:96.31:0,96,1364	1/1:1,34:35:99:1226,99,0	1/1:0,6:6:18.06:223,18,0
chr10	45858262	.	T	TA	22873.94	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-14.284;DP=705;FS=10.648;HRun=1;HaplotypeScore=62.3377;InbreedingCoeff=0.9829;MQ=83.96;MQ0=0;MQRankSum=-4.980;QD=41.36;ReadPosRankSum=4.600;VQSLOD=4.7514;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,33:33:96.33:1438,96,0	1/1:0,8:8:15.05:225,15,0	0/0:23,0:23:51.19:0,51,709	0/0:17,0:17:48.15:0,48,609	1/1:2,20:22:57.19:854,57,0	1/1:0,21:21:63.21:944,63,0	1/1:3,26:29:72.24:1079,72,0	0/0:34,0:34:99:0,99,1234	1/1:2,16:18:42.14:628,42,0	1/1:2,22:24:69.20:987,69,0	1/1:0,15:15:45.15:675,45,0	1/1:0,34:34:99:1484,99,0	1/1:0,23:23:69.23:1034,69,0	1/1:0,27:27:75.25:1124,75,0	1/1:1,31:32:90.30:1349,90,0	1/1:0,19:19:57.19:855,57,0	0/0:51,0:51:99:0,150,1947	1/1:2,32:34:93.31:1394,93,0	1/1:2,21:23:63.21:943,63,0	1/1:0,25:25:69.23:1033,69,0	1/1:2,31:33:78.26:1169,78,0	1/1:0,26:26:78.26:1168,78,0	1/1:0,16:16:42.14:630,42,0	1/1:1,36:37:99:1574,105,0	1/1:0,23:23:69.23:1034,69,0	0/0:27,0:27:81.26:0,81,1052	1/1:1,27:28:75.25:1116,75,0	1/1:0,3:3:9.03:135,9,0
chr10	45859141	.	C	CTGTG	11213.46	PASS	AB=0.941;AC=15;AF=0.268;AN=56;BaseQRankSum=-15.498;DP=719;FS=6.669;HRun=0;HaplotypeScore=112.9729;InbreedingCoeff=0.9035;MQ=88.64;MQ0=1;MQRankSum=-2.593;QD=50.06;ReadPosRankSum=3.579;VQSLOD=5.4518;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,126,2300	0/0:19,0:19:54.16:0,54,958	0/0:22,0:22:60.21:0,60,1090	0/0:33,0:33:78.10:0,78,1285	1/1:4,24:28:54.19:1438,54,0	0/0:29,0:29:84.29:0,84,1535	0/0:31,0:31:84.27:0,84,1537	0/0:36,0:36:98.97:0,99,1700	0/0:26,0:26:75.26:0,75,1391	1/1:3,24:30:87.28:2206,87,0	1/1:5,17:23:30.10:800,30,0	0/0:24,0:24:72.25:0,72,1344	0/0:22,0:22:60.21:0,60,1095	0/0:19,0:19:51.17:0,51,952	1/1:7,29:36:84.29:2237,84,0	1/1:4,25:30:69.24:1839,69,0	0/0:34,0:34:93.28:0,93,1662	1/1:1,15:16:36.12:943,36,0	0/0:11,0:11:27.09:0,27,504	0/0:23,0:23:63.22:0,63,1147	0/0:29,0:29:81.26:0,81,1471	0/0:23,0:23:63.22:0,63,1164	0/0:24,0:24:66.20:0,66,1151	0/0:20,0:20:60.19:0,60,1068	1/1:4,23:27:63.22:1679,63,0	0/1:30,2:32:72.81:73,0,1382	0/0:21,0:21:48.16:0,48,888	0/0:4,0:4:12.04:0,12,224
chr10	45859591	.	G	GA	522.71	PASS	AB=0.783;AC=5;AF=0.089;AN=56;BaseQRankSum=11.838;DP=1092;FS=6.531;HRun=0;HaplotypeScore=264.1233;InbreedingCoeff=-0.1018;MQ=65.86;MQ0=2;MQRankSum=-6.957;QD=2.10;ReadPosRankSum=-5.011;VQSLOD=1.4198;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:51:99:0,136,1883	0/0:13,0:13:36.10:0,36,484	0/0:57,0:48:73.19:0,73,1476	0/0:65,1:51:99:0,116,1414	0/0:27,0:27:78.17:0,78,1070	0/0:27,0:27:81.16:0,81,1086	0/0:49,0:49:99:0,141,1933	0/0:40,0:39:99:0,111,1550	0/1:42,16:58:99:219,0,921	0/0:36,0:36:99:0,105,1419	0/0:10,0:10:27.09:0,27,374	0/0:44,9:53:7:0,7,1050	0/1:43,16:59:99:130,0,1240	0/1:41,19:60:99:138,0,1241	0/0:37,0:37:99:0,111,1484	0/0:38,0:38:99:0,114,1577	0/0:37,0:37:99:0,102,1403	0/0:29,0:29:62.71:0,63,899	0/0:22,0:22:60.17:0,60,752	0/0:27,0:27:78.23:0,78,996	0/0:69,0:69:99:0,189,2290	0/1:27,9:36:99:106,0,671	0/1:26,10:36:46.23:46,0,715	0/0:47,9:56:47.71:0,48,1202	0/0:26,0:25:66.21:0,66,906	0/0:39,0:39:99:0,111,1514	0/0:25,0:24:72.22:0,72,916	0/0:7,0:7:21.07:0,21,273
chr10	45859592	.	C	CT	445.98	PASS	AB=0.785;AC=5;AF=0.089;AN=56;BaseQRankSum=11.720;DP=1086;FS=6.379;HRun=0;HaplotypeScore=262.4984;InbreedingCoeff=-0.0987;MQ=65.96;MQ0=2;MQRankSum=-7.637;QD=1.77;ReadPosRankSum=-4.879;VQSLOD=1.1570;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,136,1864	0/0:13,0:13:36.12:0,36,499	0/0:60,0:50:26.13:0,26,1406	0/0:64,0:51:99:0,113,1337	0/0:26,0:26:75.18:0,75,1045	0/0:27,0:27:81.18:0,81,1102	0/0:48,0:48:99:0,135,1867	0/0:41,0:40:99:0,114,1531	0/1:43,16:59:99:179,0,936	0/0:34,0:34:99:0,102,1393	0/0:10,0:10:27.05:0,27,355	0/0:44,9:53:27.49:0,27,1111	0/1:44,16:60:99:123,0,1246	0/1:41,19:60:99:128,0,1265	0/0:37,0:37:99:0,108,1484	0/0:38,0:38:99:0,114,1565	0/0:38,0:38:99:0,102,1417	0/0:25,1:26:18.35:0,18,816	0/0:22,0:22:57.50:0,58,312	0/0:26,0:26:76.18:0,76,461	0/0:68,0:68:99:0,177,1038	0/1:27,9:36:97.46:97,0,691	0/1:27,10:37:36.20:36,0,721	0/0:48,9:57:71.76:0,72,1230	0/0:24,0:24:63.21:0,63,879	0/0:37,0:37:99:0,108,1464	0/0:25,0:24:70.46:0,70,429	0/0:7,0:7:20.67:0,21,132
chr10	45861476	.	A	AGTGT	12764.71	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-1.934;DP=667;FS=8.931;HRun=0;HaplotypeScore=156.0732;InbreedingCoeff=0.9074;MQ=56.55;MQ0=6;MQRankSum=-3.740;QD=24.83;ReadPosRankSum=2.951;VQSLOD=4.3975;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,20:31:45.15:1095,45,0	1/1:5,0:11:9.03:157,9,0	0/0:38,0:13:20.80:0,21,291	0/0:31,0:18:28.22:0,28,388	1/1:9,1:34:21.07:354,21,0	1/1:6,0:22:30.10:514,30,0	1/1:6,0:15:3.01:52,3,0	0/0:25,0:38:31.76:0,32,225	1/1:7,11:22:38.60:827,39,0	1/1:11,0:26:35.84:553,36,0	1/1:19,0:30:15.05:260,15,0	1/1:6,12:19:26.96:655,27,0	1/1:6,15:23:53.65:1186,54,0	1/1:1,12:13:30.10:694,30,0	1/1:8,1:22:11.61:207,12,0	1/1:9,1:20:21.07:358,21,0	0/0:26,0:27:24.45:0,24,764	1/1:15,0:15:15.05:233,15,0	1/1:13,2:30:53.06:770,53,0	1/1:9,0:34:35:512,35,0	1/1:4,3:14:20.67:311,21,0	1/1:13,21:36:56.75:1308,57,0	1/1:7,15:25:29.84:670,30,0	1/1:3,13:17:41.88:961,42,0	1/1:7,0:20:10.85:162,11,0	0/0:6,0:18:23.55:0,24,258	1/1:5,3:23:44.89:768,45,0	1/1:4,0:8:9.03:157,9,0
chr10	45862044	.	CCTAT	C	17654.86	PASS	AB=0.514;AC=25;AF=0.446;AN=56;BaseQRankSum=18.801;DP=764;FS=5.506;HRun=0;HaplotypeScore=129.0673;InbreedingCoeff=0.9289;MQ=82.46;MQ0=0;MQRankSum=-6.270;QD=45.98;ReadPosRankSum=6.136;VQSLOD=4.9832;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,48:49:99:2049,108,0	0/0:12,0:12:36.08:0,36,860	0/0:34,0:34:93.32:0,93,2451	0/0:29,0:29:78.22:0,78,1815	0/0:32,0:32:96.29:0,96,2504	0/0:21,0:21:60.19:0,60,1574	0/0:28,0:28:78.27:0,78,2076	0/0:31,0:31:90.31:0,90,2354	1/1:1,24:25:57.19:1084,57,0	0/0:27,0:27:81.28:0,81,2185	0/0:19,0:19:57.20:0,57,1529	1/1:0,25:25:57.20:1104,57,0	1/1:1,31:32:84.29:1588,84,0	1/1:0,23:23:57.06:1043,57,0	0/0:34,0:34:99:0,99,2640	0/0:27,1:28:23.11:0,23,2010	0/0:10,0:10:30.10:0,30,744	0/0:15,0:15:42.09:0,42,1054	1/1:2,23:25:69.22:1264,69,0	1/1:1,23:24:66.23:1230,66,0	1/1:2,44:46:99:1993,105,0	1/1:0,26:26:66.23:1247,66,0	0/1:1,17:18:16.60:759,0,17	1/1:2,36:38:75.73:1445,76,0	0/0:34,0:34:99:0,99,2706	0/0:26,0:26:75.26:0,75,1990	1/1:0,27:27:72.25:1395,72,0	1/1:0,26:26:75.26:1454,75,0
chr10	45862648	.	AAGACAGACAGAC	A	14057.44	PASS	AB=0.709;AC=31;AF=0.554;AN=56;BaseQRankSum=2.154;DP=697;FS=0.379;HRun=0;HaplotypeScore=266.8439;InbreedingCoeff=0.7796;MQ=61.91;MQ0=0;MQRankSum=-15.210;QD=36.51;ReadPosRankSum=2.426;VQSLOD=3.5917;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:22,23:45:33.11:1163,33,0	0/1:2,0:7:5.30:5,0,61	0/0:39,0:33:54.18:0,54,2515	0/0:44,0:39:64.05:0,64,2343	0/0:7,0:20:27.09:0,27,697	0/1:5,0:18:14.85:15,0,43	1/1:12,0:22:8.72:23,9,0	0/0:32,0:32:48.16:0,48,2235	1/1:11,11:22:27.09:952,27,0	0/0:10,0:29:72.25:0,72,1873	0/0:3,0:10:24.08:0,24,652	1/1:13,22:35:54.19:1904,54,0	1/1:8,18:26:45.15:1585,45,0	1/1:7,19:26:39.13:1375,39,0	0/0:1,0:33:84.29:0,84,2201	0/0:14,0:33:60.21:0,60,1612	0/0:24,0:24:57.20:0,57,2937	0/0:7,0:32:63.22:0,63,1783	1/1:12,5:17:15.05:529,15,0	1/1:9,6:15:21.07:740,21,0	1/1:15,9:24:18.06:634,18,0	1/1:10,20:30:47.69:1692,48,0	1/1:5,15:20:32.80:1163,33,0	1/1:5,11:16:15.01:443,15,0	0/0:2,0:16:45.15:0,45,1152	0/1:26,1:27:33.56:34,0,3488	1/1:8,19:27:42.14:1481,42,0	1/1:5,3:7:9.03:317,9,0
chr10	45863070	.	AGGCAGATC	A	8183.05	PASS	AB=0.548;AC=13;AF=0.232;AN=56;BaseQRankSum=15.212;DP=720;FS=2.789;HRun=0;HaplotypeScore=193.5739;InbreedingCoeff=0.8918;MQ=71.58;MQ0=0;MQRankSum=-14.554;QD=52.12;ReadPosRankSum=1.605;VQSLOD=4.9673;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:56:99:0,166,7049	0/0:9,0:9:27.09:0,27,1161	0/0:10,0:10:30.10:0,30,1018	0/0:16,0:16:48.16:0,48,2027	1/1:0,18:18:23.14:379,23,0	0/0:18,0:18:54.19:0,54,2327	0/0:41,0:41:99:0,120,5304	0/0:23,0:23:63.21:0,63,2636	0/0:32,0:32:87.30:0,87,3810	1/1:6,20:26:56.89:1503,57,0	1/1:1,22:23:35.60:751,36,0	0/0:29,0:29:84.29:0,84,3609	0/0:30,0:30:84.26:0,84,3290	0/0:25,0:25:75.26:0,75,3153	1/1:2,21:23:51.18:1430,51,0	0/1:4,19:23:99:1302,0,104	0/0:47,0:47:99:0,138,5674	1/1:3,16:19:39.13:1103,39,0	0/0:22,0:22:60.20:0,60,2459	0/0:19,0:19:51.18:0,51,2097	0/0:61,0:61:99:0,181,7715	0/0:24,0:24:72.25:0,72,3120	0/0:15,0:15:42.14:0,42,1791	0/0:25,0:25:72.23:0,72,2974	1/1:0,25:25:66.09:1715,66,0	0/0:34,1:35:17.49:0,17,4201	0/0:22,0:22:66.23:0,66,2910	0/0:4,0:4:12.04:0,12,370
chr10	45863732	.	C	CA	4333.95	PASS	AB=0.892;AC=32;AF=0.571;AN=56;BaseQRankSum=10.167;DP=582;FS=18.607;HRun=2;HaplotypeScore=120.8096;InbreedingCoeff=0.4248;MQ=67.26;MQ0=2;MQRankSum=-0.183;QD=10.62;ReadPosRankSum=1.380;VQSLOD=1.8358;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:44,0:44:21.17:277,0,21	0/0:10,0:10:23.94:0,24,282	0/0:17,0:15:31.65:0,32,367	0/0:28,0:23:32.20:0,32,316	1/1:8,17:26:4.11:414,4,0	0/0:14,0:14:39.10:0,39,465	0/0:25,0:25:74.70:0,75,886	0/0:23,0:23:61.33:0,61,769	1/1:17,0:17:26.30:139,26,0	1/1:7,16:23:18.16:390,18,0	1/1:5,16:21:31.29:314,31,0	1/1:20,0:20:26.21:203,26,0	1/1:18,0:18:6.18:135,6,0	1/1:24,0:24:3.50:153,3,0	0/1:6,18:24:7.80:271,0,8	1/1:6,9:15:16.93:317,17,0	0/0:35,0:35:99:0,99,1206	1/1:3,15:18:8.43:293,8,0	1/1:20,0:19:14:195,14,0	0/1:15,1:16:2.80:154,0,3	0/1:10,0:10:3.20:86,0,3	0/1:27,0:27:31.28:155,0,31	0/1:11,0:11:16.03:33,0,16	0/1:17,0:17:5.41:129,0,5	0/1:7,11:18:11.96:209,0,12	0/0:20,1:21:20.83:0,21,631	1/1:28,0:28:32.23:288,32,0	1/1:11,0:11:31.83:179,32,0
chr10	45863734	.	AC	A	4271.85	PASS	AB=1.000;AC=41;AF=0.732;AN=56;BaseQRankSum=11.233;DP=568;FS=18.686;HRun=1;HaplotypeScore=110.0713;InbreedingCoeff=0.8679;MQ=66.53;MQ0=2;MQRankSum=-0.539;QD=10.10;ReadPosRankSum=-1.566;VQSLOD=1.2196;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:39,4:43:80.29:397,80,0	0/0:11,0:11:29.66:0,30,325	0/0:16,0:14:33.95:0,34,392	0/1:26,0:20:12.31:12,0,260	1/1:26,0:26:48.78:319,49,0	0/0:13,0:13:35.98:0,36,380	0/0:25,0:25:51.18:0,51,701	0/0:24,0:24:63.05:0,63,870	1/1:17,0:17:36.55:212,37,0	1/1:19,1:20:36.01:248,36,0	1/1:20,0:20:44.36:276,44,0	1/1:20,0:20:41.99:183,42,0	1/1:19,0:19:27.28:186,27,0	1/1:22,1:23:36.78:236,37,0	1/1:22,0:22:17.31:144,17,0	1/1:15,0:15:38.93:264,39,0	0/0:34,0:34:99:0,99,1331	1/1:17,0:17:0.82:103,1,0	1/1:19,1:19:48.03:250,48,0	1/1:16,0:16:38.88:188,39,0	1/1:10,1:11:24.82:136,25,0	1/1:25,1:26:47.56:274,48,0	1/1:9,1:10:13.20:114,13,0	1/1:16,0:16:28.29:139,28,0	1/1:17,0:17:22.53:190,23,0	0/0:22,0:22:20.97:0,21,709	1/1:28,0:28:52.45:268,52,0	1/1:11,0:11:30.22:135,30,0
chr10	45863743	.	A	AC	6650.23	PASS	AB=1.000;AC=35;AF=0.625;AN=56;BaseQRankSum=9.104;DP=550;FS=13.946;HRun=4;HaplotypeScore=96.1475;InbreedingCoeff=0.3286;MQ=67.85;MQ0=0;MQRankSum=-3.390;QD=15.72;ReadPosRankSum=1.023;VQSLOD=3.5387;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,26:40:76.66:924,77,0	0/0:11,0:11:8.98:0,9,44	0/0:13,0:12:17.22:0,17,225	0/0:19,0:17:19.55:0,20,297	0/1:22,0:22:29.13:100,0,29	0/1:13,0:13:11.86:33,0,12	0/1:28,0:28:24.76:54,0,25	0/0:25,0:25:60.14:0,60,651	1/1:0,14:14:27.09:358,27,0	0/1:21,0:21:45.89:46,0,108	0/1:15,0:15:0.71:55,0,1	1/1:1,18:20:44.98:571,45,0	1/1:2,18:20:29.88:398,30,0	1/1:5,15:23:38.68:424,39,0	0/1:20,0:20:34.54:35,0,106	0/1:12,0:12:16.83:47,0,17	0/0:38,0:38:99:0,99,1057	0/1:19,0:19:65.38:66,0,65	1/1:5,16:22:57.07:652,57,0	1/1:8,8:16:37.34:400,37,0	1/1:5,6:12:29.56:337,30,0	1/1:8,15:24:34.13:468,34,0	1/1:2,5:8:9.01:94,9,0	1/1:5,14:19:29.46:366,29,0	0/1:14,0:14:40.27:40,0,43	0/0:21,0:21:54.04:0,54,614	1/1:2,25:29:60.01:761,60,0	1/1:0,10:11:33.09:421,33,0
chr10	45864794	.	TTCCTCC	T	6134.17	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=9.631;DP=668;FS=1.787;HRun=0;HaplotypeScore=152.4944;InbreedingCoeff=0.9684;MQ=65.58;MQ0=3;MQRankSum=-9.675;QD=40.09;ReadPosRankSum=0.920;VQSLOD=4.9566;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,126,4009	0/0:4,0:4:9.02:0,9,194	0/0:34,0:25:56.96:0,57,955	0/0:32,0:26:53.67:0,54,1034	1/1:4,18:22:35.84:596,36,0	0/0:27,0:27:72.15:0,72,1899	0/0:22,0:21:60.18:0,60,1670	0/0:31,0:30:57.05:0,57,1292	0/0:25,0:25:57.15:0,57,1958	1/1:5,31:36:93.19:1843,93,0	1/1:1,20:21:50.99:910,51,0	0/0:34,0:34:93.24:0,93,2557	0/0:19,0:19:48.15:0,48,1486	0/0:15,0:15:42.14:0,42,1279	1/1:1,25:26:48.16:1033,48,0	1/1:1,19:19:42.14:932,42,0	0/0:22,0:22:63.09:0,63,1542	1/1:0,9:9:6.02:135,6,0	0/0:9,0:9:18.05:0,18,442	0/0:28,0:28:75.19:0,75,2023	0/0:22,0:22:57.17:0,57,1747	0/0:26,0:26:78.24:0,78,2375	0/0:14,0:14:39.11:0,39,1159	0/0:35,0:35:78.24:0,78,2375	1/1:1,18:19:33.11:686,33,0	0/0:29,0:29:87.25:0,87,2546	0/0:29,0:28:81.26:0,81,2549	0/0:9,0:9:26.10:0,26,646
chr10	45865168	.	G	GAAAA	4491.55	PASS	AB=0.667;AC=13;AF=0.232;AN=56;BaseQRankSum=2.681;DP=564;FS=2.117;HRun=9;HaplotypeScore=123.2386;InbreedingCoeff=0.8602;MQ=62.88;MQ0=1;MQRankSum=-8.716;QD=34.29;ReadPosRankSum=-4.106;VQSLOD=2.3995;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,129,1816	0/0:7,0:7:18.06:0,18,263	0/0:11,0:6:18.06:0,18,263	0/0:13,0:12:28.16:0,28,403	1/1:12,9:24:45.07:918,45,0	0/0:18,0:18:51.14:0,51,746	0/0:16,0:18:44.61:0,45,601	0/0:23,0:23:57.14:0,57,796	0/0:22,0:22:48.11:0,48,679	1/1:11,7:19:27.09:617,27,0	0/1:10,5:20:10.82:543,0,11	0/0:20,0:20:41.99:0,42,611	0/0:17,0:17:42.06:0,42,614	0/0:18,0:18:45.10:0,45,646	1/1:10,10:22:39.06:776,39,0	1/1:0,10:11:27.09:614,27,0	0/0:43,0:43:99:0,117,1647	1/1:4,8:11:21.07:504,21,0	0/0:13,0:13:36.12:0,36,526	0/0:27,0:27:78.24:0,78,1112	0/0:16,0:18:37.30:0,37,530	0/0:24,0:25:70.47:0,70,1012	0/0:27,0:27:60.11:0,60,857	0/0:19,0:19:48.10:0,48,682	1/1:6,1:23:41.96:519,42,0	0/0:21,0:21:0.80:0,1,728	0/0:20,0:21:52.34:0,52,710	0/0:6,0:6:18.06:0,18,263
chr10	45865523	.	CG	C	2899.30	PASS	AB=0.856;AC=33;AF=0.589;AN=56;BaseQRankSum=4.573;DP=549;FS=38.467;HRun=11;HaplotypeScore=80.4622;InbreedingCoeff=0.5459;MQ=69.92;MQ0=0;MQRankSum=0.009;QD=6.95;ReadPosRankSum=6.786;VQSLOD=-0.6489;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:11,12:23:5.03:195,5,0	0/1:7,2:9:34.26:34,0,72	0/0:10,0:10:18.74:0,19,145	0/1:10,0:10:4.75:5,0,48	0/0:14,0:15:9.71:0,10,78	0/0:11,0:11:20.98:0,21,179	0/1:27,6:34:39.91:40,0,652	0/1:12,8:20:9.10:147,0,9	1/1:8,14:22:12.94:310,13,0	0/0:22,0:22:8.41:0,8,271	0/0:10,0:10:8.61:0,9,69	1/1:6,2:33:46.72:167,47,0	1/1:8,9:17:22.98:178,23,0	1/1:9,18:28:46.95:375,47,0	0/0:12,0:21:11.57:0,12,92	0/0:16,1:17:6.28:0,6,243	1/1:9,30:41:26.59:547,27,0	0/0:7,0:17:17.50:0,17,119	1/1:3,0:21:32.35:93,32,0	1/1:0,0:9:16.29:47,16,0	1/1:8,0:48:71.28:206,71,0	1/1:6,2:10:7.06:36,7,0	0/1:8,1:11:13:13,0,52	1/1:11,25:38:66.92:527,67,0	0/0:7,0:9:5.68:0,6,28	1/1:11,3:14:5.56:49,6,0	1/1:3,0:15:18.33:53,18,0	1/1:1,0:14:26.48:77,26,0
chr10	45866748	.	T	TAAGC	8963.33	PASS	AB=0.842;AC=45;AF=0.804;AN=56;BaseQRankSum=-0.726;DP=383;FS=67.695;HRun=0;HaplotypeScore=51.7052;InbreedingCoeff=0.6292;MQ=54.36;MQ0=94;MQRankSum=-4.006;QD=31.45;ReadPosRankSum=8.193;VQSLOD=1.5202;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,6:6:15.05:327,15,0	1/1:2,5:7:18.05:369,18,0	0/1:42,0:11:8.10:8,0,192	0/0:46,0:13:22.77:0,23,283	1/1:3,3:5:12:220,12,0	1/1:1,5:6:18.06:353,18,0	1/1:2,9:10:24.06:520,24,0	0/0:17,0:12:32.12:0,32,577	1/1:0,9:8:21.07:466,21,0	1/1:5,8:8:21.07:485,21,0	1/1:2,9:9:27.09:599,27,0	1/1:2,5:5:15.05:337,15,0	1/1:2,5:8:15.05:323,15,0	1/1:3,4:6:11.98:269,12,0	1/1:1,5:5:11.53:208,12,0	1/1:1,5:7:17.98:379,18,0	0/0:23,0:20:46.34:0,46,790	1/1:2,8:8:21.07:487,21,0	0/1:35,6:8:40.12:396,0,40	1/1:1,7:7:21.07:469,21,0	1/1:9,10:10:24.08:540,24,0	1/1:1,4:4:12.04:269,12,0	1/1:0,9:9:27.05:553,27,0	1/1:4,10:11:15.03:332,15,0	1/1:1,5:5:15.05:337,15,0	0/0:12,0:11:28.34:0,28,520	1/1:0,3:3:9.03:198,9,0	0/1:7,8:9:13.72:520,0,14
chr10	45866873	.	T	TTG	9336.12	PASS	AB=1.000;AC=45;AF=0.804;AN=56;BaseQRankSum=10.904;DP=286;FS=20.072;HRun=0;HaplotypeScore=157.0988;InbreedingCoeff=0.8347;MQ=60.99;MQ0=5;MQRankSum=-9.564;QD=47.15;ReadPosRankSum=-1.485;VQSLOD=3.1963;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:20:48.12:857,48,0	1/1:2,0:2:6.02:113,6,0	0/0:8,0:8:21.03:0,21,301	0/0:14,0:11:26.64:0,27,378	1/1:9,0:9:24.07:379,24,0	1/1:11,0:11:33.11:629,33,0	1/1:13,0:13:36.08:599,36,0	0/0:20,0:19:42.14:0,42,684	1/1:5,0:5:15.03:249,15,0	1/1:11,3:13:39.13:718,39,0	1/1:6,0:6:18.06:334,18,0	1/1:11,0:11:30.10:563,30,0	1/1:7,0:7:21.07:382,21,0	1/1:10,0:10:27.09:527,27,0	1/1:9,0:9:27.09:506,27,0	1/1:5,0:5:15.05:270,15,0	0/0:27,0:27:66.15:0,66,1014	1/1:5,1:7:18.06:342,18,0	0/1:8,0:8:27.89:282,0,28	1/1:3,0:3:9.03:170,9,0	1/1:9,0:7:16.61:267,17,0	1/1:9,0:8:24.07:408,24,0	1/1:7,0:7:18.06:308,18,0	1/1:10,0:10:21.07:375,21,0	1/1:5,0:9:21.07:356,21,0	0/0:19,0:18:45.15:0,45,724	1/1:7,0:7:21.07:390,21,0	1/1:7,0:7:17.67:311,18,0
chr10	45866890	.	C	CT	6406.82	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=-1.891;DP=376;FS=16.828;HRun=7;HaplotypeScore=47.1541;InbreedingCoeff=0.9848;MQ=66.04;MQ0=0;MQRankSum=-6.398;QD=32.20;ReadPosRankSum=1.999;VQSLOD=3.1677;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,29:29:77.97:938,78,0	1/1:0,3:3:9.03:105,9,0	0/0:11,0:11:20.81:0,21,184	0/0:15,0:14:26.81:0,27,245	0/0:13,0:13:33.05:0,33,318	1/1:0,13:13:39.12:471,39,0	1/1:0,24:24:66.20:797,66,0	0/0:16,0:16:45.07:0,45,434	1/1:0,8:8:21.06:254,21,0	0/0:17,0:17:51.08:0,51,492	0/0:8,0:8:24.04:0,24,232	1/1:0,21:21:57.17:688,57,0	1/1:0,10:10:30.09:362,30,0	1/1:1,15:16:43.01:509,43,0	0/0:16,0:16:45.04:0,45,424	0/0:8,0:8:24.04:0,24,232	0/0:24,0:24:60.07:0,60,572	0/0:15,0:15:39.06:0,39,375	1/1:1,10:11:30.09:362,30,0	1/1:0,5:5:15.05:181,15,0	1/1:2,9:11:27.02:297,27,0	1/1:1,8:9:27.08:320,27,0	1/1:0,11:11:33.10:398,33,0	1/1:1,10:11:18.53:218,19,0	0/0:13,0:13:33.03:0,33,312	0/0:20,1:21:23.84:0,24,510	1/1:1,8:9:21.06:253,21,0	1/1:1,7:8:21.03:254,21,0
chr10	45867997	.	A	AT	4848.98	PASS	AB=0.923;AC=15;AF=0.268;AN=56;BaseQRankSum=-5.076;DP=505;FS=2.236;HRun=8;HaplotypeScore=54.2917;InbreedingCoeff=0.8336;MQ=64.28;MQ0=0;MQRankSum=0.971;QD=26.21;ReadPosRankSum=0.427;VQSLOD=5.5411;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:92.94:0,93,831	0/0:11,0:11:32.99:0,33,295	0/1:11,1:11:12.61:13,0,117	0/0:5,0:4:6:0,6,55	1/1:0,27:27:63.12:710,63,0	0/0:18,0:18:36.01:0,36,329	0/0:6,0:6:15.01:0,15,137	0/0:28,0:28:66.02:0,66,604	0/0:11,0:11:24.01:0,24,220	1/1:4,19:23:60.15:669,60,0	1/1:2,11:13:30.09:346,30,0	0/0:9,0:9:20.93:0,21,178	0/0:16,0:16:45:0,45,406	0/0:12,0:12:29.99:0,30,269	1/1:1,17:18:45.13:518,45,0	1/1:1,18:19:51.15:589,51,0	0/0:31,0:30:0.24:0,0,515	1/1:6,42:47:99:1260,111,0	0/0:23,0:21:38.88:0,39,427	0/0:16,0:16:45.02:0,45,412	0/0:2,0:2:5.99:0,6,51	0/0:10,0:10:21:0,21,192	0/0:15,0:15:32.91:0,33,285	0/0:9,0:9:24.01:0,24,220	1/1:3,22:25:66.13:745,66,0	0/0:23,0:23:63.03:0,63,577	0/0:23,0:23:66.04:0,66,604	0/0:18,0:18:47.99:0,48,432
chr10	45868294	.	CAGGTACCTTGG	C	8574.21	PASS	AB=0.514;AC=13;AF=0.232;AN=56;BaseQRankSum=13.764;DP=591;FS=0.427;HRun=0;HaplotypeScore=192.2715;InbreedingCoeff=0.8891;MQ=88.55;MQ0=0;MQRankSum=-13.287;QD=85.74;ReadPosRankSum=2.849;VQSLOD=4.8306;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,117,6533	0/0:12,0:12:36.12:0,36,1944	0/0:29,0:29:81.27:0,81,3837	0/0:25,0:25:59.81:0,60,2887	1/1:0,17:18:51.17:1644,51,0	0/0:20,0:20:54.19:0,54,2948	0/0:28,0:28:72.23:0,72,3623	0/0:28,0:27:81.28:0,81,3980	0/0:15,0:15:45.15:0,45,2099	1/1:0,14:14:42.14:1428,42,0	1/1:3,5:7:15.05:508,15,0	0/0:36,0:35:96.33:0,96,5326	0/0:24,0:24:69.24:0,69,3859	0/0:25,0:25:66.23:0,66,3631	1/1:0,15:15:39.13:1414,39,0	0/1:1,18:19:99:1583,0,127	0/0:37,0:37:99:0,108,5914	1/1:2,9:11:21.07:726,21,0	0/0:19,0:19:57.20:0,57,2963	0/0:9,0:9:27.09:0,27,1574	0/0:44,0:44:99:0,126,6472	0/0:8,0:8:21.07:0,21,1224	0/0:9,0:9:27.09:0,27,1450	0/0:31,0:31:93.32:0,93,4609	1/1:1,14:15:39.13:1270,39,0	0/0:30,0:30:87.29:0,87,4820	0/0:18,0:18:54.19:0,54,3019	0/0:4,0:4:12.04:0,12,699
chr10	45868363	.	G	GGTGTGT	3540.84	PASS	AB=0.944;AC=46;AF=0.852;AN=54;BaseQRankSum=-1.743;DP=681;FS=7.140;HRun=0;HaplotypeScore=200.6963;InbreedingCoeff=0.3704;MQ=53.15;MQ0=14;MQRankSum=-0.721;QD=6.41;ReadPosRankSum=-0.357;VQSLOD=1.6707;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:29:8.85:156,9,0	1/1:8,1:12:9.50:223,10,0	./.	0/0:42,0:11:0.42:0,0,1	1/1:24,0:24:3.01:60,3,0	1/1:11,0:13:5.98:98,6,0	1/1:28,0:28:8.47:134,8,0	0/1:36,0:35:0:0,0,0	1/1:21,0:20:11.25:265,11,0	1/1:19,0:19:12.51:242,13,0	0/1:7,0:7:0:0,0,0	1/1:33,0:32:25.98:536,26,0	1/1:29,0:29:12.05:254,12,0	1/1:31,0:31:5.53:89,6,0	1/1:27,0:27:11.10:259,11,0	1/1:24,0:24:2.54:38,3,0	0/0:31,0:31:30.10:0,30,539	1/1:9,0:9:3.01:38,3,0	1/1:24,0:24:5.04:93,5,0	1/1:18,0:18:2.08:88,2,0	1/1:71,0:70:14.99:235,15,0	1/1:14,0:13:2.54:90,3,0	1/1:11,0:11:5.55:151,6,0	1/1:20,0:20:5.96:59,6,0	1/1:19,0:19:3.01:79,3,0	0/0:16,0:18:3.01:0,3,42	1/1:19,1:23:9.01:197,9,0	1/1:6,0:5:6.02:157,6,0
chr10	45869873	.	ATGTG	A	7723.12	PASS	AB=0.762;AC=32;AF=0.571;AN=56;BaseQRankSum=12.343;DP=623;FS=18.062;HRun=0;HaplotypeScore=116.1762;InbreedingCoeff=0.8550;MQ=61.74;MQ0=5;MQRankSum=-4.298;QD=27.68;ReadPosRankSum=3.593;VQSLOD=3.7272;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:6,14:21:10.83:448,0,11	1/1:6,9:15:14.94:253,15,0	0/0:38,0:16:24.08:0,24,565	0/0:28,0:18:32.79:0,33,537	0/0:37,0:38:99:0,99,2317	1/1:6,14:20:36.12:608,36,0	1/1:7,18:25:33.11:542,33,0	0/0:40,0:41:84.05:0,84,1789	1/1:4,9:13:21.07:354,21,0	0/0:33,0:34:81.07:0,81,1920	0/0:24,0:25:68.97:0,69,1608	1/1:0,7:8:24.08:382,24,0	1/1:0,11:12:27.09:433,27,0	1/1:1,15:16:36.12:608,36,0	0/0:30,0:31:53.05:0,53,1825	0/0:29,0:31:86.77:0,87,1934	0/0:16,0:16:42.14:0,42,990	0/0:27,0:27:66.17:0,66,1481	1/1:4,6:10:14.66:230,15,0	1/1:5,15:20:30.10:506,30,0	1/1:3,11:14:24.08:405,24,0	1/1:4,18:24:54.17:865,54,0	1/1:1,19:20:41.30:707,41,0	1/1:3,12:15:24.08:405,24,0	0/1:16,1:17:14.74:15,0,723	0/0:28,1:31:24.18:0,24,1581	1/1:1,12:13:27.09:456,27,0	1/1:3,12:15:30.10:506,30,0
chr10	45870321	.	ATGGAAGCT	A	8301.67	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=15.047;DP=632;FS=9.954;HRun=0;HaplotypeScore=165.5505;InbreedingCoeff=0.9939;MQ=78.55;MQ0=0;MQRankSum=-12.906;QD=64.86;ReadPosRankSum=1.866;VQSLOD=4.5592;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,102,4001	0/0:16,0:16:48.16:0,48,1863	0/0:9,0:9:23.91:0,24,808	0/0:29,0:29:48.59:0,49,2097	1/1:2,29:31:68.89:1804,69,0	0/0:29,0:29:81.23:0,81,3245	0/0:22,0:22:60.21:0,60,2554	0/0:32,0:32:90.30:0,90,3666	0/0:17,0:17:48.15:0,48,2000	1/1:1,21:22:60.19:1549,60,0	1/1:1,19:20:51.18:1426,51,0	0/0:15,0:15:42.13:0,42,1582	0/0:18,0:18:51.16:0,51,2063	0/0:19,0:19:57.20:0,57,2418	1/1:0,11:11:30.10:838,30,0	1/1:1,17:18:45.15:1258,45,0	0/0:40,0:40:99:0,114,4643	1/1:3,8:11:12.04:336,12,0	0/0:28,0:28:73.12:0,73,2806	0/0:21,0:21:60.20:0,60,2241	0/0:31,0:31:93.30:0,93,3846	0/0:24,0:24:66.20:0,66,2397	0/0:19,0:19:57.18:0,57,1975	0/0:38,0:38:99:0,105,4285	1/1:1,14:15:39.13:1091,39,0	0/0:26,0:26:66.23:0,66,2682	0/0:21,0:21:54.19:0,54,2359	0/0:14,0:14:42.14:0,42,1833
chr10	45870428	.	GGT	G	1225.36	PASS	AB=0.961;AC=8;AF=0.154;AN=52;BaseQRankSum=2.281;DP=556;FS=11.839;HRun=0;HaplotypeScore=137.5490;InbreedingCoeff=0.4865;MQ=61.76;MQ0=5;MQRankSum=5.100;QD=12.01;ReadPosRankSum=4.306;VQSLOD=3.0109;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:8.76:0,9,87	1/1:0,3:3:9.03:107,9,0	0/0:30,0:16:8.99:0,9,81	0/0:19,0:9:4.81:0,5,17	0/0:21,0:21:20.96:0,21,171	1/1:4,25:30:66.03:760,66,0	1/1:7,17:24:39.12:462,39,0	0/0:28,0:29:48.11:0,48,636	0/0:17,0:17:14.87:0,15,118	0/0:26,0:26:61.88:0,62,654	0/0:19,0:19:12.03:0,12,138	0/0:25,0:25:18:0,18,162	0/0:10,0:10:2.94:0,3,18	0/0:15,0:15:9:0,9,77	0/1:10,0:10:27.69:31,0,28	0/0:7,0:7:14.25:0,14,154	0/0:42,1:43:66.37:0,66,1521	0/0:21,0:21:31.12:0,31,284	0/0:15,0:22:29.30:0,29,239	./.	./.	0/0:14,0:14:3:0,3,26	0/0:8,0:9:3.01:0,3,34	0/0:17,0:16:5.99:0,6,50	0/0:17,0:17:14.74:0,15,123	0/1:32,3:35:6.91:7,0,815	0/0:20,0:19:15.46:0,15,129	0/0:10,0:10:6:0,6,52
chr10	45870446	.	T	TGTGTGTGTGTGCGC	5574.68	PASS	AB=0.964;AC=28;AF=0.519;AN=54;BaseQRankSum=3.033;DP=575;FS=5.177;HRun=0;HaplotypeScore=213.9305;InbreedingCoeff=0.3443;MQ=53.94;MQ0=5;MQRankSum=-8.775;QD=16.84;ReadPosRankSum=-1.154;VQSLOD=3.5533;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:30:9.50:404,10,0	0/0:6,0:6:18.05:0,18,411	0/1:30,0:11:9.06:9,0,100	0/0:26,0:10:4.40:0,4,58	0/1:21,0:23:27.72:28,0,202	0/0:34,0:34:79.22:0,79,2284	0/0:26,0:26:60.08:0,60,1487	0/0:25,0:25:60.20:0,60,1442	1/1:14,0:14:15.05:891,15,0	0/1:29,0:30:99:200,0,396	0/1:17,0:17:17.28:17,0,37	1/1:27,0:27:17.66:1056,18,0	1/1:9,0:9:5.93:52,6,0	1/1:22,0:21:6.02:351,6,0	0/0:7,0:7:5.61:0,6,55	0/0:8,0:9:3.41:0,3,111	0/0:45,0:44:87.19:0,87,4343	0/1:15,0:17:48.20:48,0,228	1/1:14,0:14:37.52:1054,38,0	./.	0/0:15,0:15:0:0,0,0	1/1:15,0:15:3.01:181,3,0	1/1:13,0:13:3.01:145,3,0	1/1:21,0:20:3.01:144,3,0	0/1:18,0:18:18.28:18,0,52	0/0:29,0:29:84.22:0,84,2432	1/1:18,0:17:9.92:583,10,0	1/1:13,0:13:6.02:391,6,0
chr10	45870448	.	T	TGTGTGTGTGTGCGC	6490.71	PASS	AB=0.793;AC=30;AF=0.556;AN=54;BaseQRankSum=2.227;DP=631;FS=0.525;HRun=0;HaplotypeScore=229.3987;InbreedingCoeff=0.3207;MQ=53.93;MQ0=5;MQRankSum=-7.714;QD=15.38;ReadPosRankSum=-1.790;VQSLOD=3.5421;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:9,18:40:9.50:496,10,0	0/0:7,0:7:9.76:0,10,277	0/1:27,0:9:0.09:0,0,177	0/1:26,0:10:4.31:4,0,64	0/1:16,0:22:51.07:51,0,196	0/0:33,0:33:65.81:0,66,1738	0/0:27,0:27:27.62:0,28,1084	0/0:25,0:25:60.20:0,60,1489	1/1:3,12:19:18.06:1098,18,0	0/1:21,0:30:99:287,0,379	0/1:8,0:17:16.48:33,0,16	1/1:4,16:30:17.66:1239,18,0	1/1:10,0:10:6.02:72,6,0	1/1:6,14:26:6.02:425,6,0	0/0:4,0:5:5.51:0,6,54	0/0:8,0:10:0.69:0,1,108	0/0:46,0:45:75.89:0,76,4496	0/1:14,0:19:80.27:80,0,164	1/1:12,0:14:40.94:1143,41,0	./.	0/1:9,1:28:0.05:0,0,0	1/1:1,2:21:3.01:212,3,0	1/1:3,8:16:3.01:181,3,0	1/1:8,0:24:3.01:161,3,0	0/1:12,0:18:33.30:33,0,51	0/0:29,0:29:84.24:0,84,2565	1/1:3,0:18:9.92:585,10,0	1/1:0,0:14:6.02:390,6,0
chr10	45870456	.	T	TGC	3091.40	PASS	AB=1.000;AC=44;AF=0.786;AN=56;BaseQRankSum=10.103;DP=540;FS=3.811;HRun=0;HaplotypeScore=157.1634;InbreedingCoeff=0.5719;MQ=57.61;MQ0=3;MQRankSum=-4.004;QD=7.77;ReadPosRankSum=0.639;VQSLOD=3.5557;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:28:3.85:43,0,4	0/1:7,0:7:0.96:53,0,1	0/0:25,0:11:17.24:0,17,211	0/0:26,0:10:8.23:0,8,87	1/1:5,16:21:5.86:97,6,0	1/1:33,0:33:57.65:249,58,0	1/1:29,0:29:30.84:238,31,0	0/0:20,0:20:48.12:0,48,621	1/1:14,0:14:20.99:186,21,0	1/1:8,19:28:60.14:843,60,0	1/1:8,9:17:10.26:133,10,0	1/1:23,0:23:17.80:167,18,0	1/1:11,0:11:3:25,3,0	1/1:17,0:17:6:53,6,0	1/1:1,3:4:3.01:44,3,0	1/1:3,7:10:9.03:130,9,0	0/0:46,0:45:99:0,103,1727	1/1:7,13:20:38.88:532,39,0	1/1:12,0:12:17.56:130,18,0	1/1:17,0:17:2.74:12,3,0	1/1:22,0:22:0.08:1,0,0	1/1:18,0:18:3.47:28,3,0	1/1:13,0:13:5.67:36,6,0	1/1:19,0:18:3:27,3,0	1/1:4,10:14:8.06:103,8,0	0/0:25,0:25:66.20:0,66,905	1/1:13,0:13:6.93:74,7,0	1/1:8,0:8:7.24:54,7,0
chr10	45871083	.	C	CA	2045.22	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-8.739;DP=506;FS=13.836;HRun=8;HaplotypeScore=91.3602;InbreedingCoeff=0.9790;MQ=73.40;MQ0=0;MQRankSum=-0.135;QD=24.94;ReadPosRankSum=1.378;VQSLOD=3.0062;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,114,1043	0/0:15,0:15:39.01:0,39,357	0/0:9,0:9:14.99:0,15,134	0/0:9,0:10:12:0,12,108	1/1:4,8:12:27.04:297,27,0	0/0:16,0:16:45.02:0,45,412	0/0:26,0:26:60.01:0,60,549	0/0:18,0:18:48.01:0,48,439	0/0:26,0:26:65.98:0,66,598	1/1:2,8:10:24.07:277,24,0	1/1:0,8:8:24.07:277,24,0	0/0:21,0:21:63.03:0,63,576	0/0:26,0:26:65.98:0,66,603	0/0:24,0:24:66.01:0,66,603	1/1:2,17:19:51.11:574,51,0	1/1:2,18:20:45.10:505,45,0	0/0:19,0:19:54.03:0,54,494	1/1:1,6:7:15.04:173,15,0	0/0:20,0:20:50.94:0,51,455	0/0:27,0:27:75.04:0,75,686	0/0:25,0:25:50.99:0,51,467	0/0:17,0:17:41.97:0,42,384	0/0:11,0:11:33.02:0,33,302	0/0:19,0:19:47.98:0,48,439	1/1:1,5:6:12.04:138,12,0	0/0:21,0:21:47.99:0,48,439	0/0:23,0:22:56.99:0,57,521	0/0:9,0:9:15:0,15,137
chr10	45871132	.	C	CGAGG	3227.04	PASS	AC=22;AF=0.407;AN=54;BaseQRankSum=3.564;DP=495;FS=3.963;HRun=0;HaplotypeScore=131.8177;InbreedingCoeff=0.9309;MQ=67.05;MQ0=0;MQRankSum=-6.266;QD=21.66;ReadPosRankSum=-2.336;VQSLOD=2.7494;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:84.26:0,84,1363	0/0:12,0:12:21.07:0,21,345	0/0:14,0:13:25.71:0,26,285	0/0:20,0:16:22.27:0,22,264	1/1:7,0:7:2.92:17,3,0	0/0:14,0:14:24.08:0,24,398	0/0:28,0:28:60.64:0,61,925	0/0:16,0:16:12.04:0,12,196	0/0:28,0:28:66.16:0,66,1059	1/1:8,0:8:14.96:211,15,0	./.	0/0:22,0:22:45.14:0,45,723	0/0:21,0:21:51.15:0,51,810	0/0:29,0:29:63.18:0,63,992	1/1:16,0:20:32.91:454,33,0	1/1:13,0:14:14.42:172,14,0	0/0:21,0:21:51.17:0,51,841	1/1:2,0:2:3:26,3,0	1/1:11,5:17:21.07:417,21,0	1/1:9,8:17:18.06:392,18,0	1/1:16,12:29:31.31:644,31,0	0/0:15,0:15:30.10:0,30,493	0/0:8,0:8:18.06:0,18,295	0/0:28,0:28:57.19:0,57,943	1/1:7,0:8:18.03:254,18,0	0/0:25,0:25:63.21:0,63,1021	1/1:7,7:13:21.07:516,21,0	1/1:6,7:13:17.98:336,18,0
chr10	45872940	.	T	TG	6487.79	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-10.953;DP=411;FS=3.173;HRun=5;HaplotypeScore=44.3346;InbreedingCoeff=0.9937;MQ=99.81;MQ0=0;MQRankSum=-2.802;QD=32.44;ReadPosRankSum=3.175;VQSLOD=5.2611;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,24:29:75.19:962,75,0	0/0:6,0:6:15.04:0,15,161	0/0:21,0:21:52.92:0,53,542	0/0:22,1:23:54.13:0,54,575	0/0:8,0:8:21.05:0,21,224	0/0:9,0:9:27.07:0,27,290	0/0:13,0:13:36.07:0,36,377	0/0:12,0:12:30.04:0,30,310	1/1:3,7:10:18.06:237,18,0	0/0:18,0:18:39.57:0,40,420	0/0:11,0:11:30.07:0,30,322	1/1:2,10:12:24.08:316,24,0	1/1:0,14:14:42.14:552,42,0	1/1:1,12:13:39.13:509,39,0	0/0:9,0:9:27.07:0,27,290	0/0:19,0:19:54.14:0,54,580	0/0:19,0:19:42.10:0,42,451	0/0:21,0:21:48.12:0,48,516	1/1:0,10:10:30.10:394,30,0	1/1:1,8:9:21.07:271,21,0	1/1:2,24:26:66.21:866,66,0	1/1:2,18:20:48.16:631,48,0	1/1:3,10:13:27.06:331,27,0	1/1:1,23:24:63.20:828,63,0	0/0:11,0:11:30.07:0,30,322	0/0:11,0:11:33.08:0,33,354	1/1:0,9:9:21.07:276,21,0	1/1:1,10:11:24.08:316,24,0
chr10	45873036	.	GC	G	386.95	PASS	AB=1.000;AC=7;AF=0.140;AN=50;BaseQRankSum=3.472;DP=131;FS=2.424;HRun=5;HaplotypeScore=15.3443;InbreedingCoeff=0.5347;MQ=76.42;MQ0=1;MQRankSum=-0.535;QD=14.33;ReadPosRankSum=0.886;VQSLOD=1.0320;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:30.10:0,30,403	1/1:1,2:3:2.90:33,3,0	0/1:4,0:3:5.24:5,0,31	0/0:3,0:3:5.50:0,5,36	./.	1/1:0,7:7:15.04:170,15,0	1/1:1,12:13:27.08:306,27,0	0/0:5,0:5:9.01:0,9,95	0/0:6,0:6:18.06:0,18,246	0/0:4,0:4:6.02:0,6,82	0/0:1,0:1:3.01:0,3,41	0/0:5,0:5:15.05:0,15,204	0/0:6,0:6:15.03:0,15,186	0/0:4,0:4:12.03:0,12,144	0/0:5,0:5:15.05:0,15,205	0/0:3,0:3:9.03:0,9,122	0/0:6,0:6:18.06:0,18,242	0/0:7,0:7:21.05:0,21,262	0/0:5,0:5:15.05:0,15,204	0/0:3,0:3:6.02:0,6,82	0/0:8,0:8:21.07:0,21,278	./.	0/0:1,0:1:3.01:0,3,37	0/0:11,0:11:30.10:0,30,408	0/0:4,0:4:9.03:0,9,122	0/0:3,0:3:9.01:0,9,97	0/0:2,0:2:6.02:0,6,80	./.
chr10	45873987	.	C	CT	12581.10	PASS	AB=0.857;AC=47;AF=0.839;AN=56;BaseQRankSum=-6.427;DP=426;FS=2.917;HRun=0;HaplotypeScore=47.3871;InbreedingCoeff=0.8322;MQ=66.39;MQ0=0;MQRankSum=-1.917;QD=32.93;ReadPosRankSum=7.006;VQSLOD=4.2516;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,36:37:99:1430,105,0	1/1:2,3:5:9.01:123,9,0	0/0:5,0:5:11.98:0,12,126	0/0:7,0:7:13.33:0,13,79	1/1:2,12:14:33.03:425,33,0	1/1:0,10:10:21.07:286,21,0	1/1:0,20:20:48.16:654,48,0	0/0:14,0:14:30.01:0,30,305	1/1:0,15:15:39.13:530,39,0	1/1:0,12:12:33.09:433,33,0	1/1:0,9:9:18.06:245,18,0	1/1:1,20:21:57.18:775,57,0	1/1:2,15:17:40:528,40,0	1/1:0,15:15:42.14:567,42,0	1/1:0,10:10:30.10:407,30,0	1/1:0,15:15:39.13:531,39,0	0/0:18,0:18:45.05:0,45,521	1/1:2,24:26:66.21:896,66,0	1/1:0,16:16:45.09:538,45,0	1/1:0,6:6:18.06:238,18,0	1/1:0,33:33:78.26:1062,78,0	1/1:0,8:8:18.06:245,18,0	1/1:0,18:18:36.12:481,36,0	1/1:0,14:13:36.12:486,36,0	1/1:0,16:16:33.02:426,33,0	0/1:10,2:12:56:56,0,120	1/1:1,22:23:60.19:810,60,0	1/1:0,10:10:30.10:408,30,0
chr10	45874493	.	T	TTCC	8570.94	PASS	AB=1.000;AC=22;AF=0.393;AN=56;BaseQRankSum=-2.816;DP=534;FS=4.577;HRun=0;HaplotypeScore=93.0119;InbreedingCoeff=0.8791;MQ=65.86;MQ0=2;MQRankSum=-2.667;QD=39.86;ReadPosRankSum=2.621;VQSLOD=6.1141;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:75.24:0,75,1118	1/1:1,11:12:27.09:579,27,0	0/1:17,0:11:5.06:5,0,209	0/1:14,0:10:6.82:7,0,150	1/1:3,12:15:33.07:658,33,0	1/1:1,16:17:45.15:956,45,0	1/1:3,22:25:45.15:958,45,0	0/0:37,0:37:84.26:0,84,1217	0/0:17,0:17:36.09:0,36,529	1/1:1,17:18:51.17:1001,51,0	1/1:4,14:19:49.05:923,49,0	0/0:14,0:14:42.13:0,42,630	0/0:17,0:17:48.12:0,48,676	0/0:16,0:16:42.11:0,42,604	1/1:3,18:22:48.16:940,48,0	1/1:1,15:16:39.13:811,39,0	0/0:20,0:20:57.18:0,57,857	1/1:3,21:24:51.18:1095,51,0	0/0:21,0:21:57.18:0,57,855	0/0:13,0:13:39.13:0,39,604	0/0:34,0:34:75.25:0,75,1152	0/0:8,0:8:21.07:0,21,323	0/0:13,0:13:27.09:0,27,416	0/0:23,0:23:63.18:0,63,926	1/1:0,15:15:30.10:638,30,0	0/0:25,0:25:60.19:0,60,905	0/0:18,0:18:39.12:0,39,602	0/0:14,0:14:39.10:0,39,542
chr10	45874665	.	AT	A	1434.15	PASS	AB=0.545;AC=19;AF=0.352;AN=54;BaseQRankSum=0.259;DP=307;FS=29.851;HRun=9;HaplotypeScore=43.1124;InbreedingCoeff=0.8129;MQ=56.14;MQ0=3;MQRankSum=0.808;QD=15.42;ReadPosRankSum=2.024;VQSLOD=1.8658;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:57.10:0,57,630	1/1:3,3:6:9:82,9,0	./.	0/0:10,0:6:8.77:0,9,78	1/1:5,6:11:18:165,18,0	1/1:0,8:8:21.01:192,21,0	1/1:2,6:8:9:82,9,0	0/0:7,0:26:45.27:0,45,242	0/0:8,0:8:12.04:0,12,138	1/1:3,4:7:12:110,12,0	0/1:1,5:6:8.81:70,0,9	0/0:5,0:5:12.04:0,12,138	0/0:7,0:7:12.03:0,12,136	0/0:5,0:5:8.99:0,9,87	1/1:1,8:9:18:164,18,0	1/1:1,11:12:27.01:247,27,0	0/0:26,0:26:60.18:0,60,693	1/1:3,15:18:42.02:384,42,0	0/0:24,0:21:45.13:0,45,516	0/0:3,0:3:9.03:0,9,104	0/0:6,0:6:15.51:0,16,166	0/0:2,0:2:3.01:0,3,31	0/0:4,0:4:6:0,6,69	0/0:9,0:9:15.04:0,15,173	1/1:1,7:8:15.01:137,15,0	0/0:3,0:17:38.21:0,38,177	0/0:14,0:15:26.96:0,27,284	0/0:16,0:16:45.13:0,45,516
chr10	45875024	.	CGG	C	4530.66	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=15.626;DP=533;FS=8.837;HRun=5;HaplotypeScore=107.1931;InbreedingCoeff=0.9820;MQ=87.96;MQ0=0;MQRankSum=-14.988;QD=36.25;ReadPosRankSum=2.571;VQSLOD=3.6873;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,135,2414	1/1:0,2:2:6.02:84,6,0	0/0:20,0:20:53.83:0,54,865	0/0:23,0:23:54.59:0,55,895	1/1:0,12:12:18.06:238,18,0	1/1:2,17:19:51.17:710,51,0	1/1:0,10:10:27.05:355,27,0	0/0:42,0:42:99:0,108,1952	0/0:19,0:19:54.19:0,54,977	1/1:1,13:14:39.13:546,39,0	1/1:0,11:11:30.06:397,30,0	0/0:22,0:22:63.22:0,63,1153	0/0:21,0:21:57.20:0,57,1044	0/0:19,0:19:57.19:0,57,1020	1/1:0,15:15:42.10:565,42,0	1/1:0,15:15:42.14:587,42,0	0/0:22,0:22:63.20:0,63,1124	1/1:0,15:15:42.14:587,42,0	0/0:19,0:19:51.17:0,51,925	0/0:24,0:24:69.24:0,69,1229	0/0:30,0:30:84.28:0,84,1511	0/0:13,0:13:39.13:0,39,703	0/0:22,0:22:66.20:0,66,1153	0/0:14,0:14:42.13:0,42,740	1/1:1,11:12:33.11:461,33,0	0/0:21,1:22:21.25:0,21,1050	0/0:22,0:22:66.20:0,66,1142	0/0:8,0:8:24.08:0,24,435
chr10	45875203	.	AC	A	1870.96	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.194;DP=632;FS=3.396;HRun=1;HaplotypeScore=61.4569;InbreedingCoeff=0.9989;MQ=91.26;MQ0=1;MQRankSum=0.604;QD=36.69;ReadPosRankSum=-2.500;VQSLOD=3.0708;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,126,2000	0/0:8,0:8:24.08:0,24,383	0/0:27,0:26:75.21:0,75,1154	0/0:28,0:29:78.26:0,78,1233	0/0:30,0:30:90.29:0,90,1394	0/0:21,0:21:57.19:0,57,909	0/0:27,0:27:81.27:0,81,1270	1/1:0,30:29:87.26:1181,87,0	0/0:19,0:19:57.19:0,57,911	0/0:22,0:22:66.23:0,66,1055	0/0:21,0:21:63.21:0,63,1007	0/0:24,0:24:72.25:0,72,1151	0/0:23,0:23:69.23:0,69,1090	0/0:21,0:21:63.21:0,63,1007	0/0:15,0:15:36.12:0,36,575	0/0:22,0:22:66.21:0,66,1031	0/0:25,0:25:75.26:0,75,1199	0/0:15,0:14:45.15:0,45,719	0/0:25,0:25:75.23:0,75,1143	0/0:23,0:23:69.24:0,69,1099	0/0:24,0:24:72.23:0,72,1121	0/0:16,0:16:48.16:0,48,767	0/0:20,0:20:60.20:0,60,959	0/0:24,0:24:72.25:0,72,1151	0/0:21,0:21:63.21:0,63,987	1/1:1,20:21:60.18:811,60,0	0/0:18,0:17:51.17:0,51,815	0/0:19,0:19:57.19:0,57,911
chr10	45875644	.	G	GGCCCA	20082.38	PASS	AB=0.667;AC=25;AF=0.446;AN=56;BaseQRankSum=-14.794;DP=643;FS=1.016;HRun=0;HaplotypeScore=103.0542;InbreedingCoeff=0.9269;MQ=59.44;MQ0=0;MQRankSum=-0.604;QD=71.47;ReadPosRankSum=2.071;VQSLOD=6.3709;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,29:32:81.28:2459,81,0	0/0:12,0:12:36.12:0,36,739	0/0:27,0:15:42.14:0,42,790	0/0:19,0:9:24.08:0,24,481	0/0:23,0:23:66.23:0,66,1342	0/0:23,0:23:60.21:0,60,1211	0/0:26,0:26:66.23:0,66,1343	0/0:32,0:31:78.27:0,78,1581	1/1:1,21:23:60.21:1831,60,0	0/0:21,0:21:60.20:0,60,1166	0/0:25,0:25:66.23:0,66,1354	1/1:0,16:16:48.16:1412,48,0	1/1:4,21:25:60.21:1809,60,0	1/1:4,11:13:33.11:933,33,0	0/0:19,0:19:57.20:0,57,1170	0/0:20,0:20:57.20:0,57,1159	0/0:40,0:39:99:0,108,2170	0/0:24,0:23:63.22:0,63,1278	0/1:7,6:12:27.66:836,0,28	1/1:7,24:32:69.24:2041,69,0	1/1:5,21:26:60.21:1814,60,0	1/1:3,19:23:69.24:2052,69,0	1/1:5,13:18:36.12:1087,36,0	1/1:0,23:23:57.20:1718,57,0	0/0:21,0:21:54.19:0,54,1107	0/0:30,0:30:72.24:0,72,1433	1/1:3,17:20:48.16:1449,48,0	1/1:2,7:10:21.07:641,21,0
chr10	45875776	.	GA	G	10421.96	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=7.347;DP=626;FS=7.879;HRun=10;HaplotypeScore=66.7800;InbreedingCoeff=0.9507;MQ=71.08;MQ0=1;MQRankSum=-2.862;QD=20.93;ReadPosRankSum=6.504;VQSLOD=5.0440;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:1,30:31:74.98:651,75,0	1/1:0,10:11:29.02:240,29,0	0/0:24,1:21:12.33:0,12,345	0/0:15,1:16:3.32:0,3,236	1/1:7,36:43:98.94:858,99,0	1/1:2,22:24:59.98:521,60,0	1/1:3,21:24:59.98:521,60,0	0/0:29,0:28:63.64:0,64,698	1/1:1,26:27:74.98:651,75,0	1/1:5,24:28:71.98:625,72,0	1/1:4,19:23:50.96:440,51,0	1/1:2,19:21:31.19:397,31,0	1/1:1,11:12:29.99:260,30,0	1/1:2,16:18:47.99:417,48,0	1/1:1,21:22:56.99:495,57,0	1/1:0,16:16:38.99:339,39,0	0/0:27,0:27:66.12:0,66,704	1/1:4,22:26:65.97:573,66,0	1/1:2,17:19:50.96:438,51,0	1/1:2,16:18:38.97:338,39,0	1/1:2,15:17:38.99:339,39,0	1/1:3,16:20:44.01:370,44,0	1/1:2,24:27:62.02:527,62,0	1/1:4,21:25:29.83:488,30,0	1/1:1,11:12:29.99:259,30,0	0/0:30,0:31:68.24:0,68,785	1/1:4,23:27:59.96:520,60,0	1/1:0,6:6:18:156,18,0
chr10	45876547	.	TGAGAGAGAGAGAGAGAGAGAGGGAGA	T	1918.50	PASS	AB=0.970;AC=21;AF=0.404;AN=52;BaseQRankSum=-2.017;DP=549;FS=12.267;HRun=0;HaplotypeScore=249.9990;InbreedingCoeff=-0.0420;MQ=63.94;MQ0=15;MQRankSum=2.215;QD=6.95;ReadPosRankSum=0.447;VQSLOD=1.2090;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:28:52.89:53,0,185	0/1:7,0:7:11.97:12,0,290	0/0:37,0:16:14.21:0,14,101	0/0:51,0:21:9.44:0,9,70	0/1:14,0:14:53.85:54,0,523	0/0:5,0:5:1.95:0,2,170	0/0:28,0:28:3.01:0,3,250	0/1:13,0:26:61.23:61,0,301	./.	0/0:13,0:13:27.09:0,27,1894	0/1:18,0:18:19.02:19,0,163	0/0:28,0:28:9.03:0,9,324	0/1:10,0:10:52.88:53,0,110	0/1:8,0:8:36.87:37,0,228	0/1:17,0:17:46.79:47,0,1058	0/0:13,0:13:15.05:0,15,368	0/0:27,0:27:30.03:0,30,1773	0/0:16,0:15:2.34:0,2,1301	1/1:13,8:19:23.99:602,24,0	1/1:8,10:19:2.27:182,2,0	1/1:15,0:15:11.99:101,12,0	./.	0/1:17,0:17:18.06:18,0,137	0/1:17,0:16:15.93:16,0,276	0/1:14,0:13:14.88:15,0,554	0/0:22,0:22:27.08:0,27,2611	1/1:6,18:24:9.03:609,9,0	1/1:10,10:19:3.01:203,3,0
chr10	45876555	.	AGAGAGAGAGAGAGG	A	2372.89	PASS	AB=1.000;AC=35;AF=0.673;AN=52;BaseQRankSum=-1.381;DP=523;FS=1.372;HRun=0;HaplotypeScore=149.8477;InbreedingCoeff=0.3323;MQ=63.30;MQ0=15;MQRankSum=2.335;QD=7.73;ReadPosRankSum=3.023;VQSLOD=2.3275;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:23:17.96:192,18,0	0/1:7,0:7:11.97:12,0,139	0/0:35,0:14:12.09:0,12,92	0/0:48,0:19:11.75:0,12,52	0/1:12,0:12:20.27:107,0,20	1/1:6,0:6:0.89:2,1,0	0/0:31,0:31:3.01:0,3,164	1/1:23,0:23:19.26:122,19,0	./.	0/0:14,0:14:1.48:0,1,789	1/1:15,0:15:3.47:26,3,0	1/1:24,1:25:8.96:164,9,0	1/1:9,0:9:14.89:112,15,0	1/1:9,0:9:14.99:139,15,0	0/1:15,0:15:99:100,0,109	1/1:2,12:14:15.05:449,15,0	0/0:28,0:28:28.11:0,28,926	0/0:19,0:18:8.06:0,8,665	1/1:16,0:15:23.98:348,24,0	1/1:16,0:16:3.01:99,3,0	1/1:13,0:13:11.99:101,12,0	./.	1/1:17,0:17:5.99:49,6,0	1/1:16,0:15:8.73:61,9,0	0/1:12,0:11:37.75:38,0,230	0/1:24,0:24:20.55:21,0,1279	1/1:20,0:20:9.03:299,9,0	1/1:14,0:14:3.01:99,3,0
chr10	45876557	.	AGAGAGAGAGAGG	A	2505.02	PASS	AB=1.000;AC=37;AF=0.712;AN=52;BaseQRankSum=-1.429;DP=507;FS=5.301;HRun=0;HaplotypeScore=132.9564;InbreedingCoeff=0.2026;MQ=62.31;MQ0=15;MQRankSum=1.688;QD=7.64;ReadPosRankSum=3.441;VQSLOD=1.8459;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:23:17.96:160,18,0	0/1:8,0:8:11.99:12,0,113	0/0:34,0:13:12.50:0,12,93	0/0:47,0:18:10.57:0,11,48	1/1:14,0:14:18.44:149,18,0	1/1:8,0:8:4.24:28,4,0	0/0:30,0:30:3.01:0,3,142	1/1:21,0:21:29.58:142,30,0	./.	0/1:14,0:14:47.67:48,0,549	0/1:15,0:15:9.38:41,0,9	1/1:4,21:25:9.03:220,9,0	1/1:8,0:8:14.89:112,15,0	1/1:9,0:9:14.99:183,15,0	0/1:14,0:14:9.54:142,0,10	1/1:13,0:13:15.01:306,15,0	0/0:27,0:27:28.41:0,28,825	0/1:19,0:18:16.23:16,0,370	1/1:13,0:12:23.98:320,24,0	1/1:14,0:14:2.71:85,3,0	1/1:11,0:11:11.99:101,12,0	./.	1/1:15,0:15:5.99:49,6,0	1/1:14,2:15:9:105,9,0	0/1:11,0:10:37.76:38,0,153	0/1:24,0:24:71.89:72,0,1011	1/1:20,0:20:9.03:257,9,0	1/1:12,0:12:3.01:86,3,0
chr10	45876561	.	AGAGAGAGG	A	2825.70	PASS	AB=0.981;AC=40;AF=0.769;AN=52;BaseQRankSum=-2.331;DP=514;FS=0.000;HRun=0;HaplotypeScore=117.9314;InbreedingCoeff=0.3691;MQ=60.40;MQ0=14;MQRankSum=1.097;QD=8.14;ReadPosRankSum=0.366;VQSLOD=1.8889;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:29:29.93:243,30,0	0/1:9,0:9:11.97:12,0,58	0/0:31,0:12:14.29:0,14,102	0/0:44,0:15:11.59:0,12,49	1/1:16,0:16:26.96:223,27,0	1/1:8,0:8:3.88:27,4,0	0/0:5,22:27:3.01:0,3,99	1/1:20,0:19:11.60:138,12,0	./.	0/1:15,0:15:99:115,0,147	1/1:14,0:14:8.99:75,9,0	1/1:22,0:22:8.92:100,9,0	1/1:13,0:13:17.89:138,18,0	1/1:11,0:11:17.99:158,18,0	1/1:11,2:13:33.01:391,33,0	1/1:13,0:13:14.91:210,15,0	0/0:25,0:25:27.83:0,28,623	1/1:19,0:18:4.55:136,5,0	1/1:12,0:11:23.98:264,24,0	1/1:13,0:13:3.01:58,3,0	1/1:10,0:10:11.99:101,12,0	./.	1/1:19,0:19:5.99:49,6,0	1/1:23,0:22:16.86:134,17,0	0/1:11,1:11:18.28:84,0,18	0/1:23,0:23:99:101,0,591	1/1:20,0:20:9.03:173,9,0	1/1:12,0:12:3.01:58,3,0
chr10	45876567	.	AGG	A	3017.64	PASS	AB=1.000;AC=43;AF=0.827;AN=52;BaseQRankSum=-1.437;DP=495;FS=0.771;HRun=3;HaplotypeScore=87.5756;InbreedingCoeff=0.6067;MQ=56.27;MQ0=14;MQRankSum=0.568;QD=8.72;ReadPosRankSum=0.750;VQSLOD=0.3123;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:37,0:35:41.86:341,42,0	1/1:0,8:8:5.94:46,6,0	0/0:23,0:7:14.65:0,15,114	0/0:40,0:12:7.11:0,7,42	1/1:16,0:16:29.95:247,30,0	1/1:9,0:9:8.99:75,9,0	0/0:23,0:23:3.01:0,3,48	1/1:23,0:22:10.37:137,10,0	./.	1/1:14,0:14:41.76:322,42,0	1/1:12,0:12:11.99:100,12,0	1/1:22,0:22:8.85:56,9,0	1/1:12,0:12:20.89:164,21,0	1/1:12,0:12:20.97:174,21,0	1/1:15,0:15:35.74:286,36,0	1/1:13,0:13:14.75:93,15,0	0/0:25,0:25:32.77:0,33,344	1/1:19,0:18:39.06:292,39,0	1/1:9,0:8:23.77:180,24,0	1/1:12,0:12:2.88:16,3,0	1/1:8,0:8:11.99:101,12,0	./.	1/1:18,0:18:5.94:49,6,0	1/1:23,0:22:17.77:142,18,0	1/1:13,0:12:18.60:153,19,0	0/1:20,0:20:30.83:134,0,31	1/1:18,0:18:8.71:47,9,0	1/1:13,0:12:2.90:16,3,0
chr10	45876569	.	G	GGA	179.89	PASS	AB=0.965;AC=24;AF=0.522;AN=46;BaseQRankSum=-4.069;DP=494;FS=8.427;HRun=0;HaplotypeScore=99.7609;InbreedingCoeff=0.2975;MQ=55.91;MQ0=14;MQRankSum=2.027;QD=0.59;ReadPosRankSum=-3.215;VQSLOD=0.1196;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:35,0:32:4.20:26,4,0	0/1:8,0:8:0.09:0,0,0	./.	0/1:39,0:12:0:0,0,0	1/1:17,0:17:2.99:25,3,0	1/1:8,0:8:3.30:25,3,0	0/0:24,0:24:3.01:0,3,32	1/1:26,0:25:7.21:38,7,0	./.	0/1:14,0:14:0.06:0,0,0	./.	0/0:23,0:23:2.80:0,3,13	1/1:13,0:13:0.94:2,1,0	0/1:10,0:10:0.05:0,0,0	0/1:15,0:15:6.81:19,0,7	0/0:13,0:13:6.07:0,6,27	0/1:14,9:23:53.46:79,0,53	1/1:18,0:17:1.89:4,2,0	0/0:9,0:8:5.68:0,6,28	0/0:12,0:12:2.73:0,3,14	./.	./.	1/1:20,0:20:3:25,3,0	0/1:24,0:23:0.38:1,0,0	0/1:13,0:12:0.07:0,0,14	1/1:21,0:21:9.21:54,9,0	0/0:18,0:18:8.52:0,9,42	0/0:12,0:10:2.84:0,3,14
chr10	45877264	.	GTGTGTGTGTA	G	3699.86	PASS	AB=1.000;AC=39;AF=0.722;AN=54;BaseQRankSum=1.084;DP=451;FS=24.381;HRun=0;HaplotypeScore=124.1396;InbreedingCoeff=0.3342;MQ=62.05;MQ0=11;MQRankSum=1.608;QD=10.82;ReadPosRankSum=5.861;VQSLOD=0.6264;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:22:38.93:317,39,0	1/1:5,0:5:11.99:100,12,0	0/1:24,0:15:13.45:13,0,137	0/1:24,0:16:14.93:15,0,109	1/1:16,0:16:17.57:132,18,0	1/1:16,0:16:5.89:58,6,0	1/1:12,0:12:29.91:243,30,0	0/0:27,0:27:60.01:0,60,518	1/1:11,0:10:20.96:172,21,0	0/1:20,0:19:70.20:298,0,70	0/1:14,0:14:0:0,0,0	1/1:12,0:12:26.97:245,27,0	1/1:1,12:13:2.48:94,2,0	./.	0/1:18,0:18:86.04:141,0,86	0/0:12,0:11:3.01:0,3,32	0/0:27,0:27:50.96:0,51,1634	0/1:20,0:20:99:122,0,258	1/1:9,0:8:17.17:134,17,0	1/1:10,0:10:17.96:145,18,0	1/1:23,0:22:38.86:306,39,0	1/1:8,0:8:20.98:175,21,0	1/1:9,0:8:17.97:148,18,0	1/1:16,0:16:38.91:381,39,0	0/1:12,0:12:21.67:80,0,22	0/0:33,0:32:63.90:0,64,1347	1/1:22,0:21:36.32:283,36,0	1/1:6,0:5:11.98:98,12,0
chr10	45877266	.	GTGTGTGTA	G	3972.70	PASS	AB=1.000;AC=41;AF=0.759;AN=54;BaseQRankSum=2.061;DP=454;FS=9.370;HRun=0;HaplotypeScore=111.1120;InbreedingCoeff=0.4608;MQ=60.34;MQ0=12;MQRankSum=1.807;QD=11.55;ReadPosRankSum=4.769;VQSLOD=1.0587;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:21:38.93:317,39,0	1/1:6,0:6:14.98:124,15,0	0/1:23,0:14:18.89:19,0,136	0/1:24,0:16:14.93:15,0,109	1/1:16,0:16:17.57:132,18,0	1/1:3,13:16:5.89:96,6,0	1/1:16,0:16:32.83:267,33,0	0/0:28,0:29:62.93:0,63,529	1/1:11,0:10:20.96:172,21,0	0/1:18,0:17:11.30:327,0,11	0/1:15,0:15:0:0,0,0	1/1:13,0:13:29.95:246,30,0	1/1:13,0:13:2.59:62,3,0	./.	1/1:18,0:18:7.09:172,7,0	0/0:13,0:12:2.37:0,2,8	0/0:26,0:26:50.83:0,51,1326	0/1:19,0:19:99:139,0,119	1/1:8,0:7:20.59:158,21,0	1/1:8,0:8:17.96:145,18,0	1/1:25,0:23:38.86:306,39,0	1/1:8,0:8:20.98:175,21,0	1/1:8,0:7:17.97:148,18,0	1/1:16,0:16:41.86:337,42,0	1/1:12,0:12:20.98:175,21,0	0/0:32,0:31:66.72:0,67,1153	1/1:22,0:21:39.28:302,39,0	1/1:8,0:7:17.91:139,18,0
chr10	45877268	.	GTGTGTA	G	4422.03	PASS	AB=0.880;AC=44;AF=0.815;AN=54;BaseQRankSum=3.776;DP=457;FS=0.000;HRun=0;HaplotypeScore=99.2429;InbreedingCoeff=0.5310;MQ=55.47;MQ0=12;MQRankSum=1.066;QD=12.28;ReadPosRankSum=3.024;VQSLOD=3.4015;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:22:44.91:364,45,0	1/1:6,0:6:14.98:124,15,0	0/1:22,0:13:19.80:20,0,136	0/1:21,0:13:14.93:15,0,109	1/1:15,0:15:17.57:132,18,0	1/1:16,0:16:5.89:64,6,0	1/1:17,0:17:35.82:291,36,0	0/0:28,0:28:63.75:0,64,532	1/1:10,0:9:20.96:172,21,0	1/1:19,0:18:41.01:385,41,0	0/1:1,13:14:0:0,0,0	1/1:13,0:13:29.95:246,30,0	1/1:13,0:13:2.59:48,3,0	./.	1/1:18,0:18:32.30:263,32,0	1/1:12,0:11:2.90:16,3,0	0/0:26,0:26:50.76:0,51,1019	0/1:19,0:19:5.37:216,0,5	1/1:10,0:9:26.54:199,27,0	1/1:9,0:9:20.95:169,21,0	1/1:25,0:23:41.86:331,42,0	1/1:8,0:8:20.98:175,21,0	1/1:9,0:8:17.79:148,18,0	1/1:16,0:16:41.85:334,42,0	1/1:12,0:12:20.98:175,21,0	0/0:33,0:32:68.77:0,69,944	1/1:24,0:23:45.26:349,45,0	1/1:10,0:9:23.90:187,24,0
chr10	45877270	.	GTGTA	G	4681.23	PASS	AB=1.000;AC=45;AF=0.833;AN=54;BaseQRankSum=4.713;DP=460;FS=3.001;HRun=0;HaplotypeScore=85.9352;InbreedingCoeff=0.5987;MQ=54.67;MQ0=12;MQRankSum=0.863;QD=12.90;ReadPosRankSum=1.799;VQSLOD=4.2691;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:26:47.90:388,48,0	1/1:6,0:6:14.98:124,15,0	0/1:21,0:12:19.31:19,0,136	0/1:20,0:12:14.93:15,0,109	1/1:7,8:15:17.57:132,18,0	1/1:16,0:16:5.88:50,6,0	1/1:17,0:17:35.59:291,36,0	0/0:27,0:27:62.25:0,62,529	1/1:12,0:11:23.57:194,24,0	1/1:19,0:18:52.63:439,53,0	0/1:13,0:13:0:0,0,0	1/1:13,0:13:32.94:269,33,0	1/1:12,0:12:2.69:34,3,0	./.	1/1:18,0:18:32.31:263,32,0	1/1:1,11:11:3.01:54,3,0	0/0:27,0:27:49.77:0,50,721	1/1:19,0:19:32.51:294,33,0	1/1:10,0:9:26.58:200,27,0	1/1:9,0:9:20.95:169,21,0	1/1:25,0:23:44.85:355,45,0	1/1:9,0:9:20.98:175,21,0	1/1:9,0:8:17.97:148,18,0	1/1:16,0:16:41.84:334,42,0	1/1:13,0:13:20.98:175,21,0	0/0:33,0:32:57.21:0,57,782	1/1:22,0:21:45.26:349,45,0	1/1:11,0:10:26.88:209,27,0
chr10	45877471	.	CTT	C	4175.80	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=7.467;DP=470;FS=9.132;HRun=2;HaplotypeScore=84.2858;InbreedingCoeff=0.9970;MQ=75.84;MQ0=0;MQRankSum=-7.142;QD=44.42;ReadPosRankSum=2.358;VQSLOD=2.7513;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,108,2080	0/0:7,0:7:21.03:0,21,386	0/0:14,0:15:39.13:0,39,734	0/0:8,0:9:24.07:0,24,387	1/1:0,16:16:36.08:558,36,0	0/0:19,0:19:57.20:0,57,1158	0/0:13,0:13:36.10:0,36,660	0/0:28,0:28:84.27:0,84,1617	0/0:20,0:20:60.21:0,60,1204	1/1:2,20:22:63.05:988,63,0	1/1:0,12:12:36.08:549,36,0	0/0:14,0:14:39.13:0,39,782	0/0:15,0:15:42.13:0,42,816	0/0:14,0:14:42.14:0,42,835	1/1:2,9:11:33.11:533,33,0	1/1:0,11:11:30.10:485,30,0	0/0:28,0:28:84.26:0,84,1618	1/1:0,7:7:21.07:340,21,0	0/0:22,0:22:64.07:0,64,1145	0/0:16,0:16:48.12:0,48,933	0/0:11,0:11:33.10:0,33,624	0/0:8,0:8:24.07:0,24,440	0/0:13,0:13:39.13:0,39,792	0/0:8,0:8:24.08:0,24,487	1/1:1,14:15:45.15:722,45,0	0/0:37,0:37:99:0,111,2179	0/0:30,0:30:87.29:0,87,1722	0/0:12,0:11:33.11:0,33,670
chr10	45877495	.	T	TA	11447.98	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-5.672;DP=493;FS=5.414;HRun=7;HaplotypeScore=60.4036;InbreedingCoeff=0.9870;MQ=66.06;MQ0=0;MQRankSum=-2.125;QD=29.51;ReadPosRankSum=3.376;VQSLOD=5.5314;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,34:36:93.29:1124,93,0	1/1:1,8:9:24.07:290,24,0	0/0:9,0:9:14.97:0,15,135	0/0:7,0:7:18.02:0,18,169	1/1:3,16:19:42:458,42,0	1/1:3,13:16:39.12:471,39,0	1/1:0,14:14:36.11:435,36,0	0/0:30,0:30:81.12:0,81,779	1/1:2,20:22:57.17:689,57,0	1/1:3,23:26:72.21:859,72,0	1/1:1,16:17:51.06:573,51,0	1/1:1,16:17:45.14:544,45,0	1/1:2,13:15:36.11:435,36,0	1/1:2,14:16:39.12:471,39,0	1/1:5,12:17:27.05:311,27,0	1/1:1,10:11:30.09:362,30,0	0/0:25,0:25:66.10:0,66,637	1/1:5,9:14:22.63:398,23,0	1/1:2,18:20:54.13:626,54,0	1/1:1,16:17:48.15:579,48,0	1/1:2,7:9:18.06:217,18,0	1/1:1,10:11:33.06:378,33,0	1/1:2,13:15:30.09:362,30,0	1/1:1,5:6:15.05:181,15,0	1/1:2,16:18:45.10:527,45,0	0/0:34,0:34:93.08:0,93,883	1/1:8,19:27:51.16:614,51,0	1/1:1,15:16:45.14:544,45,0
chr10	45877862	.	G	GATA	22302.87	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=15.898;DP=494;FS=13.198;HRun=0;HaplotypeScore=165.6967;InbreedingCoeff=0.9929;MQ=88.71;MQ0=0;MQRankSum=-16.070;QD=63.18;ReadPosRankSum=5.226;VQSLOD=4.9388;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,16:19:48.16:1049,48,0	1/1:1,10:11:33.11:764,33,0	0/0:25,0:25:69.24:0,69,1254	0/0:24,0:24:69.23:0,69,1203	1/1:1,18:22:57.20:1261,57,0	1/1:1,14:18:48.16:1074,48,0	1/1:1,11:13:36.12:802,36,0	0/0:35,0:35:99:0,105,1927	1/1:0,13:14:39.13:884,39,0	1/1:0,19:20:60.21:1370,60,0	1/1:0,17:19:54.19:1204,54,0	1/1:0,13:17:45.15:1002,45,0	1/1:0,11:15:42.14:947,42,0	1/1:0,12:12:36.12:815,36,0	1/1:0,19:19:57.20:1299,57,0	1/1:0,17:17:51.18:1171,51,0	0/0:27,0:27:78.20:0,78,1375	1/1:2,8:12:30.10:661,30,0	1/1:0,8:9:24.08:564,24,0	1/1:2,26:28:84.27:1852,84,0	1/1:0,4:5:13.29:254,13,0	1/1:1,19:20:57.20:1307,57,0	1/1:0,14:17:48.16:1052,48,0	1/1:0,9:9:24.08:534,24,0	1/1:0,7:9:24.08:554,24,0	0/0:30,0:30:64.86:0,65,1594	1/1:0,16:16:48.16:1097,48,0	1/1:2,10:12:36.12:786,36,0
chr10	45877865	.	C	CT	11703.29	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=15.873;DP=480;FS=13.571;HRun=0;HaplotypeScore=190.1835;InbreedingCoeff=0.9881;MQ=87.27;MQ0=0;MQRankSum=-15.341;QD=33.63;ReadPosRankSum=4.436;VQSLOD=2.5164;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,18:18:51.11:586,51,0	1/1:1,10:11:31.34:371,31,0	0/0:24,0:24:65.79:0,66,894	0/0:22,0:22:63.18:0,63,833	1/1:3,19:22:55.07:648,55,0	1/1:3,14:17:51.06:576,51,0	1/1:2,12:14:37:436,37,0	0/0:31,0:31:90.29:0,90,1243	1/1:2,13:15:42.07:483,42,0	1/1:1,19:20:60.18:742,60,0	1/1:2,17:19:54.07:616,54,0	1/1:2,14:16:45.11:532,45,0	1/1:4,11:15:45:493,45,0	1/1:0,12:12:36.11:436,36,0	1/1:0,19:19:57.18:684,57,0	1/1:2,16:18:50.83:598,51,0	0/0:24,0:24:72.24:0,72,1007	1/1:2,10:12:33.06:365,33,0	1/1:0,8:8:24.08:310,24,0	1/1:1,26:27:79.79:947,80,0	1/1:1,5:6:10.53:142,11,0	1/1:1,19:20:57.18:689,57,0	1/1:2,14:16:48.11:542,48,0	1/1:0,9:9:21.97:270,22,0	1/1:1,7:8:24.06:283,24,0	0/0:30,1:31:50.82:0,51,1147	1/1:0,16:16:48.15:586,48,0	1/1:0,10:10:30.09:369,30,0
chr10	45880058	.	T	TC	9494.58	PASS	AB=1.000;AC=47;AF=0.839;AN=56;BaseQRankSum=9.208;DP=646;FS=0.000;HRun=6;HaplotypeScore=113.4659;InbreedingCoeff=0.8774;MQ=78.30;MQ0=3;MQRankSum=-3.841;QD=17.45;ReadPosRankSum=4.199;VQSLOD=3.8847;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,1:60:99:672,126,0	1/1:1,8:9:15.05:189,15,0	0/0:20,0:20:21.98:0,22,458	0/1:11,0:11:9.17:9,0,120	1/1:1,21:22:63.20:788,63,0	1/1:1,19:20:54.17:679,54,0	1/1:6,27:32:66.21:830,66,0	0/0:23,0:23:51.04:0,51,498	1/1:0,0:18:40.05:203,40,0	1/1:1,19:20:48.13:578,48,0	1/1:1,11:12:30.10:376,30,0	1/1:3,0:33:65.58:334,66,0	1/1:3,0:23:37.03:188,37,0	1/1:2,0:27:59.78:303,60,0	1/1:1,22:23:60.19:755,60,0	1/1:0,18:18:42.13:528,42,0	0/0:34,0:34:93.15:0,93,926	1/1:2,24:26:66.21:830,66,0	1/1:6,0:20:40.34:204,40,0	1/1:4,0:15:22.52:126,23,0	1/1:11,1:48:68.10:347,68,0	1/1:1,0:17:42.85:218,43,0	1/1:0,0:13:31.52:161,32,0	1/1:3,0:26:65.65:333,66,0	1/1:0,15:15:36.11:451,36,0	0/0:25,0:25:66.10:0,66,662	1/1:1,0:20:45.55:233,46,0	1/1:0,1:12:31.32:159,31,0
chr10	45881979	.	GCGCA	G	2470.88	PASS	AB=0.955;AC=29;AF=0.604;AN=48;BaseQRankSum=1.605;DP=490;FS=12.779;HRun=0;HaplotypeScore=122.3533;InbreedingCoeff=0.0460;MQ=53.79;MQ0=11;MQRankSum=-1.246;QD=7.58;ReadPosRankSum=-1.620;VQSLOD=1.8649;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:21:29.16:29,0,77	./.	0/1:8,0:3:6.38:17,0,6	./.	1/1:7,9:16:3.01:57,3,0	0/1:16,6:21:0:0,0,0	./.	0/0:28,0:26:45.52:0,46,653	0/1:10,0:10:33.16:71,0,33	1/1:6,21:26:51.58:726,52,0	./.	0/1:17,0:15:69.08:69,0,96	0/1:13,0:13:46.84:47,0,80	0/1:23,0:23:23.71:38,0,24	1/1:9,5:14:3:28,3,0	1/1:6,6:12:18.06:325,18,0	0/0:39,0:38:99:0,105,2270	1/1:12,4:15:35.17:484,35,0	1/1:13,0:11:17.44:146,17,0	0/0:15,0:13:0:0,0,0	1/1:17,0:14:11.78:80,12,0	1/1:17,0:16:1.63:205,2,0	0/1:8,0:8:23.33:23,0,31	0/1:29,0:26:91.29:91,0,127	0/1:8,5:13:0:0,0,0	0/0:26,0:23:39.42:0,39,570	0/1:22,0:20:5.64:108,0,6	1/1:6,1:6:6.02:75,6,0
chr10	45881981	.	GCA	G	975.33	PASS	AB=0.949;AC=24;AF=0.500;AN=48;BaseQRankSum=4.474;DP=473;FS=6.811;HRun=0;HaplotypeScore=114.9202;InbreedingCoeff=0.2993;MQ=52.69;MQ0=12;MQRankSum=-0.196;QD=3.90;ReadPosRankSum=-1.634;VQSLOD=2.0278;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:18:11.96:0,12,105	./.	0/1:8,0:3:5.84:6,0,10	./.	1/1:13,1:14:3.01:32,3,0	0/1:12,1:20:0:0,0,0	./.	0/0:29,0:27:50.83:0,51,498	0/1:11,0:11:15.86:16,0,42	1/1:26,0:25:41.37:421,41,0	./.	0/1:17,0:15:16.60:17,0,124	0/0:14,0:14:9.07:0,9,83	0/0:24,0:24:6.94:0,7,59	1/1:13,0:13:1.55:4,2,0	1/1:12,1:13:17.98:162,18,0	0/0:38,0:37:98.70:0,99,1450	1/1:10,2:13:35.15:278,35,0	0/1:13,0:11:7.03:53,0,7	0/1:16,0:13:0.08:0,0,0	1/1:18,0:15:4.11:20,4,0	0/1:18,0:17:9.56:43,0,10	0/1:9,0:9:0.18:0,0,34	0/0:28,0:25:12.74:0,13,192	0/1:8,3:11:0:0,0,0	0/0:24,0:21:31.82:0,32,448	0/1:21,0:19:7.09:55,0,7	1/1:7,0:6:4.72:17,5,0
chr10	45881983	.	ACGCG	A	3151.82	PASS	AB=1.000;AC=40;AF=0.833;AN=48;BaseQRankSum=5.633;DP=472;FS=18.805;HRun=0;HaplotypeScore=115.2945;InbreedingCoeff=0.3490;MQ=50.52;MQ0=16;MQRankSum=-0.516;QD=8.50;ReadPosRankSum=0.598;VQSLOD=1.6278;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:16,2:18:11.59:117,12,0	./.	1/1:7,0:2:3.01:31,3,0	./.	1/1:14,0:14:3.01:33,3,0	0/1:20,0:19:0.13:0,0,0	./.	0/1:27,0:25:4.63:5,0,375	1/1:12,1:13:9.29:215,9,0	1/1:25,0:24:41.23:427,41,0	./.	1/1:18,0:16:19.08:200,19,0	1/1:14,0:14:2.05:142,2,0	1/1:21,3:24:12.35:132,12,0	1/1:11,0:11:2.68:47,3,0	1/1:16,0:16:18.05:241,18,0	0/0:40,0:37:99:0,105,2015	1/1:15,0:14:24.84:324,25,0	1/1:11,4:12:21.43:264,21,0	0/0:6,10:13:0:0,0,0	1/1:20,0:17:12.04:174,12,0	1/1:18,0:17:24.01:353,24,0	1/1:7,0:7:4.56:46,5,0	1/1:27,0:24:24.32:279,24,0	0/1:11,0:10:0:0,0,0	0/1:24,0:21:15.75:16,0,290	1/1:7,12:18:13.05:119,13,0	1/1:5,2:6:6.02:104,6,0
chr10	45881985	.	GCGCACACA	G	1041.18	PASS	AB=0.995;AC=21;AF=0.438;AN=48;BaseQRankSum=0.345;DP=464;FS=7.145;HRun=0;HaplotypeScore=135.1693;InbreedingCoeff=-0.1068;MQ=48.66;MQ0=17;MQRankSum=1.408;QD=3.94;ReadPosRankSum=-2.431;VQSLOD=1.1237;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:19,0:18:29.40:29,0,199	./.	1/1:7,0:2:2.92:17,3,0	./.	1/1:15,0:15:2.80:13,3,0	0/0:19,0:19:2.53:0,3,33	./.	0/0:26,0:24:27.85:0,28,366	0/0:13,0:13:2.23:0,2,345	1/1:26,0:25:38.16:224,38,0	./.	0/1:18,0:16:14.38:14,0,459	0/1:12,0:12:19.22:19,0,311	0/1:23,0:23:12.92:13,0,142	1/1:12,0:12:2.99:23,3,0	0/1:15,1:16:16.28:202,0,16	0/0:37,0:34:93.01:0,93,2535	1/1:13,1:13:28.99:366,29,0	0/1:14,0:11:5.88:6,0,63	0/0:15,0:12:0:0,0,0	0/1:21,0:18:42.61:54,0,43	0/1:18,0:17:36.71:116,0,37	0/0:9,0:8:6.01:0,6,93	0/1:23,0:20:57.74:58,0,471	0/0:10,1:10:0:0,0,0	0/0:23,0:20:20.91:0,21,366	0/1:19,0:17:14.81:15,0,18	0/1:7,0:6:16.59:17,0,29
chr10	45881987	.	GCACA	G	1040.27	PASS	AB=1.000;AC=13;AF=0.310;AN=42;BaseQRankSum=2.008;DP=467;FS=0.733;HRun=0;HaplotypeScore=118.3569;InbreedingCoeff=0.3587;MQ=46.38;MQ0=19;MQRankSum=-4.053;QD=6.71;ReadPosRankSum=-3.168;VQSLOD=1.9519;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:18:12.04:0,12,173	./.	./.	./.	./.	0/0:20,0:19:3.01:0,3,31	./.	1/1:11,11:21:32.05:432,32,0	0/0:15,0:15:20.46:0,20,243	1/1:24,0:23:13.69:92,14,0	./.	0/0:18,0:16:24.08:0,24,345	0/0:14,0:13:14.80:0,15,169	0/0:26,0:26:4.94:0,5,86	./.	0/1:16,0:16:26.76:81,0,27	0/0:35,0:33:36.69:0,37,853	1/1:13,0:12:18.03:202,18,0	0/1:14,0:11:20.77:21,0,48	0/1:16,0:13:0.08:0,0,0	0/0:20,0:17:3.99:0,4,15	0/0:19,0:18:0:0,0,0	0/0:9,0:8:3.01:0,3,46	0/0:24,0:20:21.07:0,21,332	0/0:12,0:11:0:0,0,1	1/1:23,0:20:10.71:325,11,0	0/1:19,0:17:10.99:11,0,32	0/1:7,0:6:15.65:16,0,29
chr10	45882012	.	CACACACAGAGAGAGAG	C	2005	PASS	AB=1.000;AC=12;AF=0.273;AN=44;BaseQRankSum=4.323;DP=527;FS=2.060;HRun=0;HaplotypeScore=180.6178;InbreedingCoeff=0.0579;MQ=35.83;MQ0=21;MQRankSum=-4.338;QD=8.83;ReadPosRankSum=-0.112;VQSLOD=2.7924;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:25:13.60:0,14,269	./.	./.	./.	./.	0/1:23,0:21:29.85:43,0,30	1/1:28,0:21:2.02:43,2,0	0/1:30,0:30:34.36:251,0,34	0/0:14,0:14:28.34:0,28,593	0/1:23,0:23:13.35:788,0,13	./.	0/0:21,0:18:26.83:0,27,649	0/0:21,0:20:0.43:0,0,334	0/0:26,0:26:11.58:0,12,244	./.	0/1:19,0:17:64.17:149,0,64	0/0:42,0:38:89.13:0,89,2759	0/1:12,0:11:3.01:223,0,3	0/1:19,0:17:26.59:27,0,155	0/1:24,0:19:0:0,0,0	0/0:22,0:17:3.86:0,4,97	0/0:17,0:16:5.99:0,6,48	0/0:11,0:10:6:0,6,93	0/0:27,0:23:21.54:0,22,563	0/0:12,1:12:0.91:0,1,1	1/1:28,0:25:13.59:511,14,0	0/1:21,0:19:47.38:100,0,47	0/0:10,0:9:11.22:0,11,226
chr10	45882014	.	CACACAGAGAGAGAGAGAG	C	2485.12	PASS	AB=0.931;AC=15;AF=0.357;AN=42;BaseQRankSum=2.078;DP=515;FS=0.616;HRun=0;HaplotypeScore=183.9191;InbreedingCoeff=0.0159;MQ=35.25;MQ0=20;MQRankSum=-3.540;QD=9.14;ReadPosRankSum=-0.990;VQSLOD=2.1774;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:26:14.08:0,14,225	./.	./.	./.	./.	0/1:18,0:21:48.24:48,0,61	1/1:26,0:19:2.40:42,2,0	1/1:29,0:29:43.62:639,44,0	0/0:14,0:14:27.70:0,28,497	0/1:18,0:22:41.35:456,0,41	./.	0/0:21,0:18:24.08:0,24,511	0/1:21,0:20:16.84:17,0,236	0/0:26,0:26:9.01:0,9,223	./.	0/1:14,0:17:64.84:147,0,65	0/1:43,0:39:13.95:14,0,2581	0/1:10,0:10:30.61:145,0,31	0/0:20,0:18:5.63:0,6,208	0/1:23,0:18:0:0,0,0	0/0:22,0:17:3.22:0,3,86	./.	0/0:11,0:10:3.01:0,3,64	0/0:26,0:22:21.07:0,21,422	0/0:11,0:12:0.75:0,1,2	1/1:3,23:23:41.01:1088,41,0	0/1:19,0:18:19.22:19,0,53	0/1:10,0:9:6.62:7,0,311
chr10	45882018	.	CAGAGAGAG	C	1406.38	PASS	AB=0.900;AC=20;AF=0.476;AN=42;BaseQRankSum=3.748;DP=496;FS=0.890;HRun=0;HaplotypeScore=138.6267;InbreedingCoeff=0.2180;MQ=34.48;MQ0=20;MQRankSum=-5.018;QD=5.11;ReadPosRankSum=-0.342;VQSLOD=1.9650;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,1:26:1.25:0,1,3	./.	./.	./.	./.	1/1:19,0:20:3.19:33,3,0	1/1:25,0:18:2.59:27,3,0	1/1:28,0:28:3.84:10,4,0	0/0:15,0:16:11.66:0,12,102	1/1:12,0:18:32.57:531,33,0	./.	0/1:19,0:17:16.98:17,0,38	0/1:19,0:19:14.52:15,0,33	0/0:23,0:23:2.77:0,3,30	./.	0/1:13,0:16:15.34:51,0,15	0/0:40,0:39:12.49:0,12,744	0/1:11,0:10:2.38:135,0,2	1/1:14,3:18:11.61:243,12,0	0/1:13,8:17:0:0,0,0	0/0:12,9:17:2.71:0,3,45	0/1:16,0:15:0:0,0,0	./.	0/0:25,0:21:2.98:0,3,21	0/1:9,0:11:0.39:0,0,1	0/1:25,0:22:21.01:151,0,21	1/1:7,7:18:17.71:320,18,0	0/0:7,3:9:8.69:0,9,104
chr10	45882058	.	TAGACAGAGACAG	T	5862.85	PASS	AB=0.696;AC=33;AF=0.688;AN=48;BaseQRankSum=4.419;DP=581;FS=3.895;HRun=0;HaplotypeScore=123.5477;InbreedingCoeff=0.6082;MQ=39.74;MQ0=58;MQRankSum=-0.104;QD=17.71;ReadPosRankSum=-0.142;VQSLOD=3.7473;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:23,2:23:15.05:457,15,0	./.	0/0:44,0:11:30.10:0,30,736	0/0:42,0:5:9.03:0,9,223	1/1:10,1:10:6.02:189,6,0	1/1:20,3:21:6.22:169,6,0	1/1:23,0:19:2.19:97,2,0	0/0:24,0:21:51.17:0,51,1286	0/1:3,14:17:0:0,0,0	1/1:16,2:18:36.12:888,36,0	1/1:9,0:9:3.01:98,3,0	1/1:15,1:16:20.30:547,20,0	1/1:3,22:24:2.13:93,2,0	0/0:7,11:18:0.47:0,0,1	./.	1/1:20,4:22:15.24:376,15,0	0/0:39,0:37:6.77:0,7,2520	1/1:12,0:11:30.10:643,30,0	1/1:12,11:21:29.80:558,30,0	1/1:15,3:15:11.91:321,12,0	./.	0/1:3,18:21:0:0,0,0	./.	1/1:22,1:22:15.05:386,15,0	1/1:17,0:17:8.47:278,8,0	0/0:27,0:24:14.63:0,15,925	1/1:17,2:19:25.87:551,26,0	0/1:7,0:7:99:211,0,101
chr10	45883443	.	GTCAATCTA	G	9047.22	PASS	AB=0.963;AC=29;AF=0.518;AN=56;BaseQRankSum=-0.741;DP=716;FS=3.141;HRun=0;HaplotypeScore=238.8809;InbreedingCoeff=0.3534;MQ=58.15;MQ0=4;MQRankSum=3.312;QD=18.39;ReadPosRankSum=3.923;VQSLOD=4.1148;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:27,3:30:50.95:454,51,0	0/0:13,0:13:36.24:0,36,382	0/0:23,0:19:56.94:0,57,580	0/0:16,0:15:28.38:0,28,373	1/1:13,7:20:32.76:312,33,0	0/0:22,0:22:55.62:0,56,635	0/0:24,0:24:65.84:0,66,649	0/0:38,0:35:99:0,102,857	0/1:30,0:30:99:321,0,700	1/1:33,6:39:99:1542,106,0	1/1:20,4:23:56.94:574,57,0	0/1:28,0:29:99:230,0,699	0/1:25,0:25:99:308,0,441	0/1:26,0:26:99:319,0,491	1/1:22,0:29:68.98:725,69,0	0/1:16,0:22:24.50:292,0,25	0/0:26,0:24:41.84:0,42,343	0/1:15,1:16:2.67:373,0,3	1/1:18,2:19:50.81:536,51,0	1/1:16,7:23:47.92:428,48,0	0/0:0,35:35:0:0,0,0	0/1:34,0:35:99:400,0,635	0/1:28,0:28:99:272,0,848	0/1:28,0:28:99:347,0,390	1/1:12,10:23:33.10:421,33,0	0/0:27,0:27:51.07:0,51,1343	1/1:1,27:28:26.74:625,27,0	1/1:13,4:17:44.95:570,45,0
chr10	45883446	.	AATCTATCT	A	2114.73	PASS	AB=1.000;AC=22;AF=0.440;AN=50;BaseQRankSum=2.200;DP=712;FS=1.278;HRun=0;HaplotypeScore=263.0657;InbreedingCoeff=0.5815;MQ=56.83;MQ0=5;MQRankSum=-4.077;QD=7.10;ReadPosRankSum=-1.502;VQSLOD=1.9548;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:28:8.89:59,9,0	0/1:10,0:13:4.10:4,0,101	./.	./.	1/1:20,0:20:5.79:64,6,0	0/0:23,0:23:10.76:0,11,256	0/0:26,0:26:12.51:0,13,194	0/0:41,0:37:11.95:0,12,114	0/0:29,0:29:39.12:0,39,1105	1/1:37,0:37:39.02:643,39,0	1/1:23,0:22:6.01:105,6,0	0/0:30,0:30:45.15:0,45,1187	0/0:27,0:27:27.08:0,27,733	0/0:25,0:25:24.08:0,24,748	1/1:30,0:30:23.97:274,24,0	0/1:21,0:21:65.64:66,0,77	./.	0/1:16,0:16:57.59:84,0,58	1/1:18,0:17:9:152,9,0	1/1:23,0:23:5.92:41,6,0	0/0:35,0:35:0:0,0,0	0/0:34,0:34:36.11:0,36,1028	0/0:26,0:26:39.13:0,39,1250	0/0:26,0:26:21.01:0,21,634	0/1:23,0:23:8.04:91,0,8	0/0:29,0:28:6.60:0,7,775	1/1:27,0:27:20.99:451,21,0	1/1:19,0:19:18:263,18,0
chr10	45883499	.	ATCATCTG	A	631.88	PASS	AB=1.000;AC=7;AF=0.130;AN=54;BaseQRankSum=2.289;DP=727;FS=1.700;HRun=0;HaplotypeScore=277.2170;InbreedingCoeff=0.1308;MQ=47.55;MQ0=14;MQRankSum=-8.806;QD=3.04;ReadPosRankSum=-0.782;VQSLOD=2.4108;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:66.04:0,66,1374	0/1:15,0:15:32.06:191,0,32	0/0:15,0:1:2.99:0,3,23	./.	0/0:30,0:29:5.40:0,5,102	1/1:18,4:22:18.02:288,18,0	0/1:20,0:18:5.63:6,0,542	0/1:83,0:81:99:197,0,2337	0/0:28,0:28:71.27:0,71,1931	0/0:34,0:34:64.75:0,65,1275	0/0:18,0:18:4.25:0,4,27	0/0:30,0:30:54.43:0,54,1591	0/0:26,0:26:56.96:0,57,1504	0/0:21,0:21:29.64:0,30,958	0/1:36,0:36:2.93:3,0,150	0/0:24,0:24:8.47:0,8,194	0/0:22,0:20:20.90:0,21,458	0/0:17,0:17:11.01:0,11,133	0/0:19,0:15:34.80:0,35,721	0/0:30,0:30:48.07:0,48,1057	0/0:16,0:16:14.58:0,15,331	0/0:24,0:24:42.14:0,42,1273	0/0:22,0:22:57.20:0,57,1692	0/0:20,0:19:42.14:0,42,1222	0/0:29,0:29:5.29:0,5,66	0/1:32,0:26:70.95:71,0,757	0/0:28,0:27:24.23:0,24,831	0/0:23,0:22:27.15:0,27,666
chr10	45883502	.	ATCTG	A	2050.42	PASS	AB=0.877;AC=4;AF=0.074;AN=54;BaseQRankSum=-6.351;DP=730;FS=1.881;HRun=0;HaplotypeScore=245.7052;InbreedingCoeff=-0.1009;MQ=47.48;MQ0=15;MQRankSum=-7.211;QD=13.95;ReadPosRankSum=-1.845;VQSLOD=3.1723;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:69.13:0,69,1596	0/1:15,0:15:42.74:43,0,66	0/0:17,0:1:3.01:0,3,35	./.	0/0:31,0:30:5.77:0,6,154	0/1:22,0:22:21.66:46,0,22	0/0:19,0:17:23.38:0,23,622	0/1:50,29:77:99:1532,0,2423	0/0:26,0:26:68.25:0,68,1670	0/0:32,0:32:83.46:0,83,1635	0/0:19,0:19:5.91:0,6,130	0/0:30,0:30:57.67:0,58,1459	0/0:28,0:28:57.18:0,57,1370	0/0:22,0:22:32.64:0,33,789	0/0:35,0:35:14.38:0,14,275	0/0:24,0:24:17.90:0,18,227	0/0:25,0:23:29.94:0,30,777	0/0:18,0:18:15:0,15,247	0/0:17,0:15:42.07:0,42,927	0/0:30,0:30:48.15:0,48,1157	0/0:15,0:15:14.89:0,15,387	0/0:25,0:25:42.12:0,42,946	0/0:24,0:23:51.14:0,51,1199	0/0:20,0:19:42.11:0,42,951	0/0:29,0:29:5.71:0,6,61	0/1:22,9:24:99:537,0,701	0/0:29,0:28:63.59:0,64,1372	0/0:23,0:22:42.14:0,42,1005
chr10	45883520	.	CATCTATCTATCTATCT	C	3519.65	PASS	AB=0.674;AC=18;AF=0.346;AN=52;BaseQRankSum=2.234;DP=816;FS=4.863;HRun=0;HaplotypeScore=368.7342;InbreedingCoeff=0.6324;MQ=50.44;MQ0=10;MQRankSum=-0.493;QD=10.63;ReadPosRankSum=-1.788;VQSLOD=0.8338;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:38:59.88:0,60,2464	1/1:0,11:11:8.96:230,9,0	./.	./.	1/1:6,35:41:8.76:116,9,0	1/1:8,15:23:3.01:98,3,0	1/1:20,0:18:14.94:203,15,0	0/0:66,0:60:51.08:0,51,788	0/0:15,0:37:56.21:0,56,1535	1/1:6,41:47:99:2081,108,0	0/1:3,18:22:0.07:0,0,0	0/0:11,0:37:54.58:0,55,1247	0/0:10,0:32:60.14:0,60,1478	0/0:5,0:23:27.09:0,27,732	0/1:9,35:44:11.50:173,0,11	1/1:8,22:30:21.54:474,22,0	0/0:26,0:24:48.16:0,48,2116	0/1:5,14:20:35.83:36,0,93	0/0:13,0:18:27.08:0,27,600	0/0:13,0:38:64.31:0,64,1581	0/0:15,0:15:24.05:0,24,1062	0/0:11,0:27:34.26:0,34,766	0/0:11,0:23:25.68:0,26,550	0/0:12,0:20:36.10:0,36,1026	1/1:7,25:32:3.01:62,3,0	0/1:23,0:34:46.93:47,0,1125	0/0:32,0:31:75.26:0,75,3527	0/0:9,0:26:42.09:0,42,1290
chr10	45883536	.	T	TATC	3148.22	PASS	AB=0.983;AC=23;AF=0.442;AN=52;BaseQRankSum=9.751;DP=758;FS=0.000;HRun=0;HaplotypeScore=205.9609;InbreedingCoeff=-0.4088;MQ=52.37;MQ0=10;MQRankSum=-0.184;QD=5.61;ReadPosRankSum=6.300;VQSLOD=2.3487;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:82.62:0,83,1311	1/1:11,0:11:8.56:113,9,0	./.	./.	0/1:39,0:39:47.44:47,0,72	1/1:18,0:18:2.80:61,3,0	0/1:13,9:21:62.06:62,0,123	0/0:40,0:34:90.21:0,90,1237	0/1:39,0:39:99:209,0,472	0/1:42,0:42:99:863,0,548	0/0:21,0:21:5.67:0,6,71	0/1:39,0:39:99:223,0,475	0/1:34,0:34:99:248,0,385	0/1:25,0:25:99:118,0,228	0/1:38,0:38:99:108,0,119	0/1:27,0:27:13.82:227,0,14	0/0:27,0:25:54.18:0,54,891	0/1:19,0:19:32.82:33,0,83	0/1:12,0:12:78.35:78,0,241	0/1:32,0:32:99:320,0,205	0/0:15,0:15:33.11:0,33,533	0/1:26,0:26:99:143,0,189	0/1:19,0:18:84.61:85,0,202	0/1:23,0:22:99:112,0,369	1/1:25,0:25:3.01:42,3,0	0/1:42,0:35:35.15:35,0,665	0/0:33,0:32:87.30:0,87,1420	0/1:29,0:28:99:178,0,274
chr10	45885465	.	CA	C	6232.17	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=1.644;DP=470;FS=1.600;HRun=11;HaplotypeScore=57.2975;InbreedingCoeff=0.9304;MQ=74.56;MQ0=1;MQRankSum=-1.515;QD=17.31;ReadPosRankSum=4.786;VQSLOD=5.5829;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,25:31:7.97:540,8,0	1/1:0,9:9:26.97:222,27,0	0/0:13,0:13:28.35:0,28,315	0/0:13,0:11:18.34:0,18,174	1/1:3,21:24:59.91:493,60,0	1/1:1,1:17:27.44:95,27,0	1/1:2,0:12:18.33:53,18,0	1/1:11,11:23:39.75:306,40,0	1/1:4,10:15:28.13:226,28,0	1/1:5,18:23:53.91:440,54,0	1/1:3,22:25:62.91:517,63,0	1/1:4,17:21:50.91:419,51,0	1/1:3,13:16:0.95:214,1,0	1/1:2,15:17:41.94:345,42,0	1/1:3,13:16:32.94:271,33,0	1/1:4,16:19:41.95:345,42,0	0/0:17,1:21:35:0,35,512	1/1:3,18:21:50.94:419,51,0	0/0:11,0:12:30.39:0,30,287	0/0:17,0:21:53.89:0,54,528	0/0:10,0:10:15.03:0,15,152	1/1:2,16:18:38.92:320,39,0	1/1:4,10:14:29.96:246,30,0	1/1:1,8:9:20.52:172,21,0	1/1:2,14:16:9.96:288,10,0	1/1:0,12:13:38:301,38,0	0/0:13,0:13:33.05:0,33,330	0/0:6,0:6:12.03:0,12,128
chr10	45885637	.	GT	G	3765.41	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=5.156;DP=526;FS=2.795;HRun=8;HaplotypeScore=58.2565;InbreedingCoeff=0.9933;MQ=70.04;MQ0=0;MQRankSum=2.123;QD=24.45;ReadPosRankSum=3.365;VQSLOD=4.5411;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:81.13:0,81,920	0/0:6,0:6:15.05:0,15,181	0/0:10,0:10:24.07:0,24,284	0/0:9,0:9:18:0,18,176	1/1:5,27:32:81.12:782,81,0	0/0:15,0:15:33.03:0,33,368	0/0:20,0:20:51.13:0,51,592	0/0:40,0:40:99:0,111,1321	0/0:15,0:15:39.12:0,39,471	1/1:0,23:23:69.11:665,69,0	1/1:4,19:23:51.07:493,51,0	0/0:15,0:15:39.12:0,39,471	0/0:24,0:24:66.19:0,66,787	0/0:16,0:16:39.12:0,39,471	1/1:1,18:19:51.08:493,51,0	1/1:1,13:14:39.06:377,39,0	0/0:25,0:25:75.23:0,75,905	1/1:5,17:22:48.07:464,48,0	0/0:17,0:17:48.15:0,48,580	0/0:27,0:27:75.23:0,75,905	0/0:13,0:13:36.11:0,36,435	0/0:10,0:10:27.08:0,27,326	0/0:21,0:21:54.17:0,54,652	0/0:13,0:13:33.10:0,33,399	1/1:4,17:21:51.08:493,51,0	0/0:19,1:20:28.19:0,28,623	0/0:23,0:22:63.15:0,63,744	0/0:6,0:6:18.06:0,18,217
chr10	45886287	.	GT	G	2277.59	PASS	AB=0.775;AC=29;AF=0.518;AN=56;BaseQRankSum=0.135;DP=568;FS=2.800;HRun=13;HaplotypeScore=94.4045;InbreedingCoeff=0.5618;MQ=68.34;MQ0=7;MQRankSum=1.929;QD=6.45;ReadPosRankSum=3.523;VQSLOD=2.9296;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,23:31:23.97:423,24,0	0/0:3,0:8:14.20:0,14,71	0/1:18,1:11:26.86:27,0,46	0/0:23,0:16:3.03:0,3,115	0/0:20,0:22:41.83:0,42,378	0/0:5,0:20:39.92:0,40,205	0/0:6,0:14:20:0,20,105	1/1:10,0:35:50.39:146,50,0	0/1:5,11:16:30.89:114,0,31	0/0:16,0:18:41.86:0,42,381	0/0:14,0:17:33.62:0,34,255	0/1:6,2:8:2.21:78,0,2	1/1:3,12:15:6.53:192,7,0	1/1:2,6:9:10.82:71,11,0	0/0:13,1:15:7.98:0,8,220	0/1:17,1:18:15.73:16,0,179	0/0:10,0:37:66.12:0,66,399	0/0:21,0:22:4.94:0,5,188	1/1:6,0:22:26.45:77,26,0	1/1:5,0:29:52.49:154,52,0	1/1:3,0:15:22.40:66,22,0	0/1:6,15:21:16.74:214,0,17	1/1:7,8:15:0.37:154,0,0	1/1:4,24:28:56.60:416,57,0	0/0:14,0:14:36.02:0,36,333	1/1:4,1:31:40.52:149,41,0	1/1:4,0:30:48.87:143,49,0	1/1:0,0:7:14.26:42,14,0
chr10	45886305	.	C	CT	1974.72	PASS	AB=0.751;AC=14;AF=0.250;AN=56;BaseQRankSum=-6.871;DP=577;FS=2.278;HRun=9;HaplotypeScore=105.8869;InbreedingCoeff=0.7728;MQ=57.66;MQ0=14;MQRankSum=-0.182;QD=14.31;ReadPosRankSum=-1.048;VQSLOD=3.4768;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:35:71.88:0,72,620	0/0:10,0:9:9.81:0,10,83	0/0:9,0:5:4.60:0,5,22	0/0:15,0:11:5.53:0,6,57	1/1:10,12:21:30.04:318,30,0	0/0:16,0:16:32.92:0,33,286	0/0:14,0:11:17.98:0,18,154	0/0:40,0:38:53.94:0,54,468	0/0:15,0:15:17.91:0,18,156	1/1:5,17:22:47.90:481,48,0	1/1:3,12:16:32.87:324,33,0	0/1:9,1:10:21.07:21,0,66	0/0:18,0:17:20.88:0,21,182	0/0:11,0:11:23.68:0,24,204	1/1:3,11:14:18.05:199,18,0	1/1:9,12:20:5.68:276,6,0	0/0:37,1:37:28.75:0,29,464	0/1:5,11:16:2.28:208,0,2	0/0:25,0:26:43.68:0,44,370	0/0:29,0:28:43.93:0,44,357	0/0:18,0:17:32.93:0,33,277	0/0:23,0:23:41.79:0,42,341	0/0:15,0:15:29.91:0,30,257	0/0:31,0:31:65.96:0,66,572	1/1:5,11:16:30.08:332,30,0	0/0:31,1:31:32.81:0,33,509	0/0:30,0:29:59.84:0,60,516	0/0:11,0:11:32.99:0,33,286
chr10	45887301	.	TG	T	6085.03	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=15.060;DP=705;FS=4.890;HRun=5;HaplotypeScore=87.4611;InbreedingCoeff=0.9999;MQ=79.60;MQ0=0;MQRankSum=-2.911;QD=29.98;ReadPosRankSum=2.878;VQSLOD=5.4629;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,35:38:96.27:1088,96,0	0/0:17,0:17:51.12:0,51,660	0/0:15,0:15:39.09:0,39,491	0/0:25,0:25:60.11:0,60,722	0/0:25,0:25:66.17:0,66,862	0/0:21,0:21:57.19:0,57,778	0/0:23,0:23:63.20:0,63,841	0/0:19,0:19:57.18:0,57,765	1/1:1,17:18:48.14:544,48,0	0/0:47,0:47:99:0,132,1752	0/0:26,0:26:72.24:0,72,981	1/1:2,26:28:75.21:850,75,0	1/1:2,28:30:75.21:848,75,0	1/1:0,28:28:78.22:884,78,0	0/0:28,0:28:81.27:0,81,1107	0/0:33,0:32:96.32:0,96,1305	0/0:24,0:24:66.22:0,66,899	0/0:20,0:20:51.16:0,51,678	0/0:19,0:19:42.14:0,42,574	0/0:28,0:28:81.27:0,81,1107	0/0:41,0:41:99:0,114,1541	1/1:0,20:20:51.15:578,51,0	1/1:1,17:18:51.15:578,51,0	1/1:2,21:23:63.18:714,63,0	0/0:21,0:21:54.18:0,54,738	0/0:37,0:37:99:0,105,1413	0/0:22,0:22:60.14:0,60,794	0/0:11,0:11:30.10:0,30,410
chr10	45887970	.	GCA	G	902.06	PASS	AB=0.950;AC=29;AF=0.604;AN=48;BaseQRankSum=4.721;DP=506;FS=3.792;HRun=0;HaplotypeScore=75.9478;InbreedingCoeff=0.0641;MQ=66.71;MQ0=10;MQRankSum=-0.878;QD=2.57;ReadPosRankSum=1.424;VQSLOD=1.4959;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:34,0:34:34.04:34,0,149	1/1:6,1:7:5.75:44,6,0	./.	./.	1/1:4,2:6:3.01:32,3,0	1/1:9,0:14:10.08:46,10,0	1/1:20,0:26:4.56:12,5,0	./.	0/0:13,0:13:14.26:0,14,164	./.	1/1:3,3:6:6.49:65,6,0	0/0:18,0:24:26.39:0,26,284	0/1:8,0:15:20.34:23,0,20	0/1:21,2:23:16.94:17,0,122	1/1:17,5:22:11.86:110,12,0	0/1:13,1:15:32.63:66,0,33	1/1:15,12:26:29.56:284,30,0	0/1:16,3:19:7.54:89,0,8	0/0:12,0:11:2.99:0,3,23	1/1:5,1:7:5.85:46,6,0	0/1:33,1:33:7.93:8,0,236	0/0:6,0:6:3:0,3,25	0/1:6,0:6:25.97:26,0,38	0/1:19,1:21:22.03:22,0,231	1/1:20,2:22:6.01:64,6,0	1/1:29,0:31:11.45:61,11,0	0/1:12,0:12:9.16:9,0,160	0/0:10,0:10:12.02:0,12,152
chr10	45888517	.	CCAT	C	10437.84	PASS	AB=0.600;AC=31;AF=0.554;AN=56;BaseQRankSum=-3.536;DP=713;FS=11.990;HRun=0;HaplotypeScore=149.1759;InbreedingCoeff=0.9272;MQ=60.95;MQ0=1;MQRankSum=-3.252;QD=27.04;ReadPosRankSum=1.288;VQSLOD=4.4906;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,26:38:72.20:993,72,0	1/1:2,15:17:42.14:595,42,0	0/0:32,0:28:42.06:0,42,679	0/0:25,0:25:50.76:0,51,871	0/0:12,0:30:51.15:0,51,651	0/0:22,0:22:48.16:0,48,955	0/0:28,0:28:60.21:0,60,1207	1/1:18,18:36:57.13:751,57,0	1/1:6,27:33:81.27:1137,81,0	0/0:15,0:34:75.24:0,75,1059	0/0:7,0:28:57.86:0,58,791	1/1:2,18:20:51.17:723,51,0	1/1:3,13:16:33.11:468,33,0	1/1:5,17:21:39.13:547,39,0	0/0:13,0:33:57.19:0,57,776	0/0:11,0:28:48.16:0,48,653	0/0:27,0:27:60.21:0,60,1211	0/0:5,0:15:36.12:0,36,516	1/1:8,10:18:27.06:358,27,0	1/1:8,13:21:27.09:368,27,0	1/1:5,26:31:60.20:851,60,0	1/1:3,11:14:21.07:298,21,0	1/1:3,14:17:32.98:468,33,0	1/1:5,25:30:60.20:851,60,0	0/0:6,0:25:48.16:0,48,633	0/1:7,15:24:19.98:626,0,20	1/1:7,31:38:75.25:1063,75,0	1/1:4,7:11:24.08:340,24,0
chr10	45889873	.	GGT	G	1047.36	PASS	AB=0.842;AC=28;AF=0.636;AN=44;BaseQRankSum=3.602;DP=450;FS=0.000;HRun=0;HaplotypeScore=82.3015;InbreedingCoeff=0.6097;MQ=64.34;MQ0=16;MQRankSum=-0.020;QD=4.57;ReadPosRankSum=2.860;VQSLOD=2.3172;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:25:14.76:108,15,0	1/1:2,5:7:9:92,9,0	./.	./.	1/1:7,0:12:14.29:72,14,0	1/1:7,1:8:3.01:32,3,0	1/1:25,6:31:14.22:123,14,0	./.	1/1:6,3:9:11.86:110,12,0	./.	1/1:4,0:7:8.61:45,9,0	1/1:11,4:15:15.03:156,15,0	0/0:14,0:13:12:0,12,149	0/0:15,0:15:6.48:0,6,70	1/1:14,0:15:5.84:40,6,0	1/1:8,0:18:16.59:82,17,0	0/1:23,2:27:44.24:102,0,44	./.	0/0:16,0:15:12.03:0,12,155	0/0:11,0:10:9:0,9,77	0/0:47,0:47:18.81:0,19,201	1/1:5,3:8:3.01:32,3,0	./.	1/1:19,2:21:14.59:134,15,0	1/1:8,0:11:11.32:55,11,0	0/1:10,0:13:14.37:30,0,14	0/0:11,0:13:6.86:0,7,185	0/0:18,0:17:12.01:0,12,144
chr10	45889968	.	TC	T	8038.52	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=8.978;DP=476;FS=5.286;HRun=1;HaplotypeScore=63.1450;InbreedingCoeff=0.9974;MQ=75.15;MQ0=2;MQRankSum=-0.901;QD=36.87;ReadPosRankSum=1.656;VQSLOD=5.3711;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:51.14:0,51,699	1/1:0,7:7:21.07:293,21,0	0/0:25,0:22:35.25:0,35,570	0/0:19,0:18:16.91:0,17,333	1/1:3,20:23:62:876,62,0	1/1:1,19:20:48.13:648,48,0	1/1:0,14:14:33.11:460,33,0	1/1:1,27:28:74.85:1034,75,0	0/0:11,0:11:33.11:0,33,464	1/1:0,16:16:48.14:637,48,0	1/1:1,17:17:42.10:563,42,0	0/0:10,0:10:30.09:0,30,410	0/0:10,0:10:30.09:0,30,410	0/0:10,0:10:30.10:0,30,425	1/1:0,12:12:30.10:419,30,0	1/1:0,16:16:39.13:544,39,0	0/0:26,1:27:39.83:0,40,987	1/1:0,20:20:57.19:793,57,0	0/0:20,0:20:60.16:0,60,789	0/0:12,0:12:36.12:0,36,515	0/0:16,0:16:48.10:0,48,611	0/0:21,0:21:63.14:0,63,873	0/0:16,0:16:48.16:0,48,681	0/0:23,0:23:66.18:0,66,898	1/1:0,18:18:51.17:705,51,0	1/1:0,26:26:78.25:1067,78,0	0/0:11,0:11:33.11:0,33,470	0/0:9,0:9:27.08:0,27,368
chr10	45890153	.	T	TTA	5994.61	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-13.268;DP=525;FS=6.508;HRun=0;HaplotypeScore=58.8245;InbreedingCoeff=0.9985;MQ=69.81;MQ0=0;MQRankSum=-2.022;QD=45.41;ReadPosRankSum=2.178;VQSLOD=6.1658;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,18:19:48.16:841,48,0	0/0:9,0:9:27.09:0,27,365	0/0:22,0:20:48.16:0,48,636	0/0:14,0:12:26.75:0,27,314	0/0:28,0:28:75.23:0,75,998	0/0:20,0:20:54.18:0,54,731	0/0:10,0:10:21.05:0,21,267	0/0:29,0:29:66.21:0,66,879	1/1:1,14:15:39.13:684,39,0	0/0:29,0:29:75.24:0,75,990	0/0:11,0:11:24.08:0,24,325	1/1:2,16:18:45.15:789,45,0	1/1:0,14:14:39.13:684,39,0	1/1:0,10:10:30.10:526,30,0	0/0:17,0:17:48.16:0,48,650	0/0:15,0:15:45.15:0,45,609	0/0:23,0:23:63.21:0,63,852	0/0:19,0:19:51.17:0,51,690	0/0:18,0:18:51.16:0,51,677	0/0:22,0:22:63.21:0,63,852	0/0:28,0:28:78.26:0,78,1053	1/1:2,18:20:48.16:841,48,0	1/1:1,20:21:48.16:841,48,0	1/1:0,15:15:45.15:789,45,0	0/0:23,0:23:63.21:0,63,852	0/0:29,0:29:78.25:0,78,1040	0/0:13,0:13:33.11:0,33,446	0/0:14,0:14:42.06:0,42,513
chr10	45890934	.	TTTTCTCTCTC	T	305.31	PASS	AB=1.000;AC=8;AF=0.143;AN=56;BaseQRankSum=5.384;DP=374;FS=6.548;HRun=0;HaplotypeScore=101.7278;InbreedingCoeff=0.5267;MQ=63.50;MQ0=15;MQRankSum=-2.291;QD=5.76;ReadPosRankSum=0.135;VQSLOD=0.9608;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:25.72:0,26,305	1/1:0,0:5:6.02:162,6,0	0/0:16,0:8:17.20:0,17,214	0/0:20,0:15:19.17:0,19,351	0/0:19,0:18:29.15:0,29,248	1/1:0,11:11:3.01:100,3,0	1/1:1,0:7:3.01:82,3,0	0/0:26,0:25:74.99:0,75,707	0/0:11,0:11:20.96:0,21,176	0/0:10,0:10:29.98:0,30,487	0/0:13,0:12:36.05:0,36,607	0/1:10,0:9:14.55:15,0,183	0/0:11,0:11:31.27:0,31,333	0/0:10,0:9:19.18:0,19,174	0/0:10,0:8:18:0,18,368	0/0:6,0:6:18.05:0,18,473	0/0:31,0:30:81:0,81,2152	0/0:11,0:8:21.02:0,21,470	0/0:12,0:10:27.05:0,27,590	0/0:17,0:17:48.01:0,48,615	0/0:14,0:13:31.43:0,31,505	0/0:11,0:11:21.81:0,22,173	0/0:15,0:15:29.98:0,30,315	0/0:12,0:11:26.91:0,27,270	0/0:9,0:9:27.06:0,27,592	0/1:19,0:18:73.88:74,0,316	0/0:7,0:7:13.27:0,13,268	0/0:11,0:9:27.01:0,27,301
chr10	45890936	.	TTCTCTC	T	758.50	PASS	AC=24;AF=0.462;AN=52;BaseQRankSum=3.585;DP=403;FS=11.912;HRun=0;HaplotypeScore=84.2383;InbreedingCoeff=0.6112;MQ=60.68;MQ0=18;MQRankSum=-4.256;QD=5.09;ReadPosRankSum=2.002;VQSLOD=0.9022;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:20:3.48:42,3,0	1/1:5,0:5:6.02:84,6,0	./.	0/0:19,0:14:0:0,0,0	0/0:20,0:19:0:0,0,0	1/1:12,0:10:3.01:42,3,0	1/1:9,0:8:2.48:41,2,0	0/0:29,0:28:3.48:0,3,43	1/1:7,4:11:3.01:60,3,0	0/0:12,0:12:12.04:0,12,221	0/0:12,0:12:9.03:0,9,214	1/1:7,0:7:6.02:84,6,0	1/1:12,0:11:5.99:49,6,0	1/1:5,5:9:9.03:182,9,0	0/0:6,0:7:6:0,6,62	0/0:4,0:8:16.97:0,17,255	0/0:37,0:37:47.19:0,47,1280	0/0:15,0:12:18.06:0,18,409	0/0:12,0:10:9.03:0,9,238	0/0:18,0:17:6.02:0,6,114	0/0:17,0:16:9.03:0,9,125	1/1:5,6:11:6.02:121,6,0	1/1:8,9:17:2.57:60,3,0	1/1:12,1:12:6:85,6,0	0/0:10,0:10:12.04:0,12,284	1/1:18,0:18:6.40:77,6,0	0/0:4,0:7:6.91:0,7,84	./.
chr10	45891050	.	TA	T	2094.89	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=1.292;DP=556;FS=3.771;HRun=12;HaplotypeScore=76.9823;InbreedingCoeff=0.8522;MQ=81.37;MQ0=2;MQRankSum=0.152;QD=11.26;ReadPosRankSum=1.993;VQSLOD=3.6074;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,1:25:39.73:0,40,544	0/0:10,0:10:24.04:0,24,238	0/0:33,0:21:6.22:0,6,126	0/1:34,0:28:19.74:20,0,106	1/1:1,26:27:62.48:473,62,0	1/1:3,10:13:29.88:232,30,0	1/1:0,2:2:2.99:23,3,0	0/0:12,0:38:75.83:0,76,434	0/0:14,0:14:17.03:0,17,327	1/1:5,10:15:29.83:228,30,0	1/1:4,15:20:40.84:307,41,0	0/0:22,0:22:32.32:0,32,489	0/0:13,0:13:33.03:0,33,319	0/0:14,0:14:27.05:0,27,269	1/1:3,14:17:5.42:225,5,0	1/1:1,8:10:19.96:145,20,0	0/0:15,2:17:15.80:0,16,322	1/1:6,17:23:38.82:302,39,0	0/0:15,1:17:21.67:0,22,376	0/0:33,0:33:74.97:0,75,734	0/0:13,1:14:15.82:0,16,335	0/0:17,0:19:35.90:0,36,344	0/0:26,0:26:63.11:0,63,632	0/0:12,0:12:23.86:0,24,215	1/1:2,21:23:43.89:346,44,0	0/0:7,0:25:60.45:0,60,356	0/0:24,0:24:60.10:0,60,597	0/0:14,0:14:29.65:0,30,290
chr10	45892593	.	T	TTTTG	1800.59	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-7.643;DP=724;FS=0.742;HRun=0;HaplotypeScore=115.0236;InbreedingCoeff=0.9946;MQ=70.23;MQ0=4;MQRankSum=0.202;QD=34.63;ReadPosRankSum=-1.780;VQSLOD=3.5083;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:72.23:0,72,1153	0/0:9,0:9:18.06:0,18,284	0/0:39,0:34:59.16:0,59,891	0/0:36,0:29:42.54:0,43,705	0/0:26,0:26:48.15:0,48,761	1/1:6,20:26:36.12:887,36,0	1/1:7,17:25:42.14:1035,42,0	0/0:36,0:36:87.28:0,87,1358	0/0:28,0:28:69.19:0,69,1096	0/0:35,0:35:84.28:0,84,1373	0/0:23,0:23:48.16:0,48,800	0/0:20,0:20:45.14:0,45,707	0/0:30,0:30:72.23:0,72,1148	0/0:21,0:21:51.16:0,51,825	0/0:21,0:21:45.15:0,45,744	0/0:25,0:24:54.18:0,54,894	0/0:40,0:40:93.30:0,93,1478	0/0:10,0:10:27.09:0,27,436	0/0:19,0:18:39.13:0,39,636	0/0:24,0:24:60.20:0,60,970	0/0:40,0:40:99:0,102,1682	0/0:13,0:13:36.12:0,36,585	0/0:18,0:18:45.15:0,45,749	0/0:25,0:25:63.21:0,63,1025	0/0:26,0:26:54.18:0,54,884	0/0:24,0:24:54.16:0,54,817	0/0:34,0:34:87.23:0,87,1348	0/0:15,0:15:27.09:0,27,450
chr10	45892777	.	GAA	G	2220.49	PASS	AB=0.962;AC=20;AF=0.357;AN=56;BaseQRankSum=-2.907;DP=662;FS=0.803;HRun=3;HaplotypeScore=120.4085;InbreedingCoeff=0.4810;MQ=51.18;MQ0=39;MQRankSum=1.877;QD=7.60;ReadPosRankSum=0.473;VQSLOD=0.2364;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:20,2:21:26.14:308,26,0	0/0:14,0:14:17.40:0,17,95	0/0:22,0:4:2.19:0,2,63	0/0:34,0:8:9.45:0,9,81	0/1:39,0:38:26.48:26,0,811	1/1:0,19:19:9.03:122,9,0	1/1:18,0:14:8.14:149,8,0	0/0:24,0:24:62.23:0,62,510	1/1:26,2:28:42.45:391,42,0	0/0:24,0:22:32.15:0,32,391	0/0:21,0:21:37.21:0,37,523	1/1:23,0:23:31.06:254,31,0	0/1:23,0:21:37.56:124,0,38	0/1:19,2:21:11.01:215,0,11	0/1:15,3:17:96.81:97,0,382	0/0:21,3:17:10.19:0,10,281	0/0:39,0:38:39.57:0,40,300	0/0:16,0:16:31.65:0,32,493	0/0:14,0:14:24.86:0,25,351	0/0:23,0:23:29.24:0,29,641	0/1:16,0:14:10.16:10,0,145	1/1:21,2:23:44.27:398,44,0	1/1:22,1:22:13.58:229,14,0	0/1:19,0:19:23.43:91,0,23	0/0:43,0:41:79.91:0,80,1357	0/0:28,0:26:60.57:0,61,692	0/0:26,0:26:71.27:0,71,885	0/0:16,0:14:23.71:0,24,174
chr10	45892779	.	AAGAGAGAG	A	1021.92	PASS	AB=1.000;AC=9;AF=0.173;AN=52;BaseQRankSum=7.243;DP=671;FS=28.024;HRun=0;HaplotypeScore=184.7688;InbreedingCoeff=0.2603;MQ=49.94;MQ0=38;MQRankSum=-5.163;QD=5.77;ReadPosRankSum=0.238;VQSLOD=1.3014;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:21:30.08:0,30,413	1/1:2,0:14:20.77:354,21,0	./.	./.	0/0:40,0:38:53.89:0,54,986	0/0:20,0:20:9.10:0,9,79	0/0:18,0:14:9.01:0,9,109	0/1:25,0:24:6.36:39,0,6	0/0:28,0:28:21.63:0,22,193	0/0:13,0:26:42.14:0,42,885	0/0:22,0:22:27.07:0,27,533	0/0:24,0:24:27.03:0,27,374	0/1:23,0:21:35.70:36,0,246	0/1:21,0:21:87.95:88,0,188	0/0:19,0:19:32.59:0,33,716	0/0:17,0:17:15.03:0,15,303	1/1:14,24:37:3.35:142,3,0	0/0:14,0:15:33.09:0,33,665	0/0:14,0:14:26.25:0,26,300	0/0:21,0:22:39.11:0,39,829	0/0:11,0:16:18.06:0,18,308	0/1:26,0:26:58.68:245,0,59	0/0:20,0:19:4.83:0,5,141	0/0:19,0:19:18.37:0,18,221	0/0:41,0:43:62.21:0,62,1717	0/1:30,0:28:94:259,0,94	0/0:25,0:25:52.46:0,52,1208	0/0:17,0:15:14.33:0,14,127
chr10	45892819	.	GAGAAAGAA	G	4250.41	PASS	AB=1.000;AC=20;AF=0.357;AN=56;BaseQRankSum=2.267;DP=712;FS=18.976;HRun=0;HaplotypeScore=204.4192;InbreedingCoeff=0.7651;MQ=51.24;MQ0=20;MQRankSum=1.496;QD=14.36;ReadPosRankSum=2.543;VQSLOD=2.3828;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:25:35.08:529,35,0	0/1:14,0:14:83.09:83,0,90	0/0:4,0:2:5.38:0,5,71	0/0:10,0:4:12.04:0,12,203	0/0:43,0:41:79.11:0,79,1428	1/1:24,0:24:2.34:37,2,0	0/0:17,0:13:7.22:0,7,23	0/0:22,0:17:50.72:0,51,569	1/1:30,0:30:6.31:81,6,0	0/0:36,0:36:80.72:0,81,1957	0/0:23,0:23:42.99:0,43,912	1/1:27,0:27:31.41:479,31,0	1/1:30,0:28:55.43:888,55,0	1/1:23,1:24:48.11:789,48,0	0/0:29,0:27:66.75:0,67,1163	0/0:24,0:17:34.31:0,34,680	0/1:45,0:44:4.68:5,0,899	0/0:22,0:22:48.15:0,48,959	0/0:18,0:18:31.33:0,31,437	0/0:30,0:29:69.16:0,69,1429	0/0:26,0:24:39.11:0,39,735	1/1:10,12:22:29.15:540,29,0	1/1:22,0:21:5.29:92,5,0	1/1:32,0:32:41.59:727,42,0	0/0:34,0:33:69.65:0,70,1661	0/0:29,0:27:60.65:0,61,1084	0/0:33,0:33:66.57:0,67,1469	0/0:11,0:15:32.80:0,33,489
chr10	45892821	.	GAAAGAA	G	4245.12	PASS	AB=0.884;AC=20;AF=0.357;AN=56;BaseQRankSum=2.439;DP=697;FS=5.396;HRun=0;HaplotypeScore=180.0839;InbreedingCoeff=0.6556;MQ=51.35;MQ0=20;MQRankSum=1.275;QD=15.05;ReadPosRankSum=0.601;VQSLOD=3.9941;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:25,1:25:44.65:683,45,0	0/1:14,0:14:9.57:10,0,99	0/0:5,0:3:6.63:0,7,74	0/0:10,0:4:12.04:0,12,203	0/0:41,0:39:17.48:0,17,1156	1/1:21,0:21:10.09:106,10,0	0/0:17,0:13:3.78:0,4,30	0/0:24,0:19:57.11:0,57,729	1/1:5,25:30:14.80:292,15,0	0/0:37,0:37:17.93:0,18,1603	0/0:23,0:23:52.01:0,52,1014	1/1:28,0:28:48.45:655,48,0	1/1:27,0:27:45.33:799,45,0	1/1:21,1:23:20.48:637,20,0	0/0:29,0:27:3.48:0,3,972	0/1:22,0:18:2.86:3,0,630	0/0:45,0:44:58.63:0,59,1008	0/0:22,0:22:51.10:0,51,1049	0/1:17,0:17:5.85:6,0,392	0/0:29,0:28:64.35:0,64,1323	0/0:26,0:24:44.76:0,45,742	1/1:21,0:22:6.87:300,7,0	0/1:8,10:17:9.51:36,0,10	1/1:28,0:29:33.50:719,33,0	0/0:34,0:33:69.71:0,70,1725	0/0:28,0:26:59.96:0,60,1219	0/0:29,0:29:74.90:0,75,1545	0/0:16,0:15:25.72:0,26,427
chr10	45892838	.	AAGG	A	1655.99	PASS	AB=0.778;AC=8;AF=0.143;AN=56;BaseQRankSum=9.237;DP=593;FS=21.401;HRun=0;HaplotypeScore=134.3490;InbreedingCoeff=0.6877;MQ=56.67;MQ0=4;MQRankSum=-9.401;QD=14.65;ReadPosRankSum=-3.556;VQSLOD=1.4864;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:60.06:0,60,840	0/0:13,0:13:32.80:0,33,527	0/0:18,0:14:40.31:0,40,707	0/0:16,0:10:29.68:0,30,497	0/0:26,0:25:66.23:0,66,1468	0/1:4,16:20:23.96:379,0,24	1/1:4,13:17:23.01:344,23,0	1/1:29,0:24:29.46:574,29,0	0/0:18,0:18:15:0,15,158	0/0:30,0:30:87.30:0,87,1953	0/0:19,0:19:51.17:0,51,1134	0/0:22,0:22:63.10:0,63,920	0/0:24,0:24:44.90:0,45,734	0/0:21,0:21:20.54:0,21,706	0/0:22,0:21:60.20:0,60,1348	0/0:21,0:18:39.12:0,39,816	0/0:38,0:37:70.48:0,70,1568	0/0:16,0:16:45.15:0,45,1017	0/0:10,0:10:27.06:0,27,515	0/0:24,0:24:69.23:0,69,1478	0/0:26,0:24:63.20:0,63,1240	0/1:17,0:17:7.37:7,0,396	0/0:7,0:7:3.90:0,4,55	0/0:25,0:25:59.51:0,60,710	0/0:22,0:22:57.19:0,57,1271	1/1:30,0:28:35.90:503,36,0	0/0:24,0:24:71.98:0,72,1469	0/0:18,0:17:40.17:0,40,762
chr10	45892848	.	A	AG	2815.77	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=7.469;DP=649;FS=13.076;HRun=1;HaplotypeScore=112.9544;InbreedingCoeff=0.9582;MQ=65.71;MQ0=4;MQRankSum=-6.689;QD=26.82;ReadPosRankSum=-2.802;VQSLOD=1.7807;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:63.18:0,63,798	0/0:12,0:12:30.03:0,30,351	0/0:25,0:21:51.77:0,52,601	0/0:19,0:13:6.33:0,6,325	0/0:23,0:23:66.21:0,66,855	1/1:17,3:20:15.22:358,15,0	1/1:14,2:16:30.08:393,30,0	1/1:8,32:35:58.94:1180,59,0	0/0:19,0:19:22.47:0,22,219	0/0:32,0:32:90.22:0,90,1102	0/0:19,0:19:54.15:0,54,663	0/0:25,0:25:72.22:0,72,920	0/0:26,0:26:72.22:0,72,921	0/0:24,0:24:67.68:0,68,789	0/0:24,0:23:69.22:0,69,883	0/0:24,0:21:45.13:0,45,557	0/0:39,0:38:75.15:0,75,922	0/0:19,0:19:51.17:0,51,661	0/0:18,0:18:48.11:0,48,543	0/0:23,0:23:69.21:0,69,880	0/0:30,0:28:75.18:0,75,924	0/0:20,0:20:44.91:0,45,509	0/0:10,0:10:11.37:0,11,154	0/0:27,0:27:59.30:0,59,795	0/0:19,0:19:51.16:0,51,650	1/1:7,22:28:63.68:1043,64,0	0/0:24,0:24:72.22:0,72,909	0/0:20,0:19:51.17:0,51,659
chr10	45893095	.	GA	G	2040.96	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=11.890;DP=810;FS=12.781;HRun=5;HaplotypeScore=102.2336;InbreedingCoeff=0.9990;MQ=78.46;MQ0=0;MQRankSum=-1.331;QD=28.35;ReadPosRankSum=0.540;VQSLOD=2.4220;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,102,1361	0/0:10,0:10:27.09:0,27,369	0/0:17,1:18:27.76:0,28,603	0/0:23,0:23:39.20:0,39,652	0/0:33,0:33:90.26:0,90,1204	1/1:1,36:37:99:1190,105,0	1/1:4,31:35:87.20:972,87,0	0/0:34,0:34:99:0,99,1355	0/0:23,0:23:66.21:0,66,889	0/0:38,0:38:99:0,108,1446	0/0:25,0:25:72.22:0,72,962	0/0:32,0:32:93.28:0,93,1239	0/0:34,0:34:90.27:0,90,1180	0/0:35,0:35:99:0,102,1379	0/0:29,0:29:78.25:0,78,1051	0/0:22,0:22:63.20:0,63,845	0/0:37,0:37:99:0,108,1424	0/0:18,0:18:54.18:0,54,735	0/0:23,0:23:57.04:0,57,733	0/0:23,0:23:66.08:0,66,877	0/0:37,0:37:96.30:0,96,1294	0/0:34,0:34:87.28:0,87,1173	0/0:26,0:26:75.24:0,75,1009	0/0:30,0:30:87.29:0,87,1190	0/0:23,0:23:63.21:0,63,861	0/0:44,0:44:99:0,117,1592	0/0:34,0:34:87.22:0,87,1156	0/0:16,0:16:45.15:0,45,615
chr10	45893320	.	T	TAGAC	5424.92	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=0.330;DP=643;FS=4.123;HRun=0;HaplotypeScore=102.8785;InbreedingCoeff=0.9997;MQ=67.53;MQ0=0;MQRankSum=-8.788;QD=48.01;ReadPosRankSum=-1.230;VQSLOD=5.1648;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:63.22:0,63,1063	0/0:16,0:16:45.15:0,45,763	0/0:28,0:28:72.19:0,72,1097	0/0:18,0:18:42.13:0,42,648	0/0:27,0:27:75.24:0,75,1243	1/1:7,22:30:51.18:1260,51,0	1/1:0,12:13:30.10:742,30,0	1/1:14,16:32:53.99:1155,54,0	0/0:20,0:20:54.18:0,54,915	0/0:24,0:24:57.19:0,57,944	0/0:31,0:31:78.25:0,78,1297	0/0:16,0:16:42.10:0,42,633	0/0:13,0:13:36.09:0,36,557	0/0:21,0:21:57.09:0,57,931	0/0:24,0:24:63.19:0,63,1027	0/0:22,0:22:51.17:0,51,865	0/0:22,0:22:56.94:0,57,966	0/0:22,0:22:39.13:0,39,661	0/0:25,0:25:57.18:0,57,914	0/0:30,0:30:78.22:0,78,1243	0/0:17,0:17:39.13:0,39,661	0/0:28,0:28:66.21:0,66,1093	0/0:17,0:17:42.13:0,42,686	0/0:17,0:17:39.13:0,39,661	0/0:22,0:22:63.22:0,63,1068	1/1:6,32:38:48.45:2267,48,0	0/0:27,0:27:81.24:0,81,1315	0/0:18,0:18:48.16:0,48,814
chr10	45895794	.	TA	T	3814.02	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=15.155;DP=575;FS=9.322;HRun=2;HaplotypeScore=70.5025;InbreedingCoeff=0.9891;MQ=70.74;MQ0=0;MQRankSum=-2.818;QD=35.98;ReadPosRankSum=-2.216;VQSLOD=2.7973;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:90.28:0,90,1307	0/0:14,0:14:42.14:0,42,629	0/0:11,0:11:27.09:0,27,404	0/0:7,0:7:11.77:0,12,132	0/0:27,0:27:78.18:0,78,1098	1/1:0,20:20:54.18:700,54,0	1/1:0,11:11:30.10:386,30,0	1/1:2,40:42:99:1482,120,0	0/0:13,0:13:39.13:0,39,584	0/0:29,0:29:87.29:0,87,1304	0/0:25,0:25:75.23:0,75,1085	0/0:20,0:20:60.20:0,60,899	0/0:20,0:20:54.18:0,54,809	0/0:14,0:14:42.14:0,42,629	0/0:20,0:20:57.19:0,57,853	0/0:12,0:12:36.12:0,36,539	0/0:24,0:24:72.24:0,72,1075	0/0:24,0:24:66.22:0,66,989	0/0:21,0:21:63.21:0,63,943	0/0:25,0:25:75.25:0,75,1124	0/0:9,0:9:27.09:0,27,405	0/0:22,0:22:66.21:0,66,968	0/0:28,0:28:81.27:0,81,1196	0/0:7,0:7:21.03:0,21,290	0/0:26,0:26:78.25:0,78,1149	1/1:1,32:33:96.31:1246,96,0	0/0:25,0:24:72.24:0,72,1076	0/0:15,0:15:45.15:0,45,674
chr10	45895858	.	C	CTGTTCTTCCCAGCTGG	17701.18	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=4.117;DP=692;FS=14.060;HRun=0;HaplotypeScore=288.5820;InbreedingCoeff=0.9988;MQ=84.10;MQ0=0;MQRankSum=-13.431;QD=138.29;ReadPosRankSum=-4.426;VQSLOD=3.0673;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:59,0:59:99:0,166,6550	0/0:7,0:7:21.07:0,21,885	0/0:26,0:26:63.18:0,63,1922	0/0:23,0:23:45.15:0,45,1422	0/0:29,0:29:81.28:0,81,3472	1/1:22,5:28:84.23:4405,84,0	1/1:15,6:25:60.16:3916,60,0	1/1:42,0:42:99:4872,102,0	0/0:19,0:19:54.19:0,54,2314	0/0:32,0:32:87.28:0,87,3538	0/0:23,0:23:60.21:0,60,2478	0/0:18,0:18:48.16:0,48,2128	0/0:22,0:22:57.18:0,57,2427	0/0:19,0:19:54.14:0,54,2137	0/0:12,0:12:36.11:0,36,1438	0/0:18,0:18:54.19:0,54,2275	0/0:24,0:24:66.21:0,66,2612	0/0:27,0:27:72.25:0,72,3135	0/0:18,0:18:51.15:0,51,1674	0/0:35,0:35:96.32:0,96,3629	0/0:23,0:23:69.22:0,69,2845	0/0:17,0:17:45.14:0,45,1821	0/0:32,0:32:90.29:0,90,3686	0/0:21,0:21:57.18:0,57,2387	0/0:23,0:23:63.21:0,63,2488	1/1:24,9:33:81.28:4508,81,0	0/0:22,0:22:54.19:0,54,2239	0/0:15,0:15:42.14:0,42,1627
chr10	45896028	.	CT	C	3062.15	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=5.582;DP=562;FS=3.896;HRun=10;HaplotypeScore=72.7215;InbreedingCoeff=0.9644;MQ=83.82;MQ0=0;MQRankSum=0.561;QD=21.12;ReadPosRankSum=1.167;VQSLOD=4.7459;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:54.14:0,54,590	0/0:11,0:11:30.07:0,30,325	0/0:25,1:26:6.93:0,7,259	0/0:9,0:9:12:0,12,149	1/1:1,34:35:98.96:859,99,0	0/0:1,0:20:36.42:0,36,173	0/0:3,0:13:22.50:0,22,109	0/0:5,0:40:69.39:0,69,357	0/0:12,0:12:30.08:0,30,332	1/1:2,24:26:65.96:572,66,0	1/1:1,14:15:35.98:312,36,0	0/0:27,0:27:78.20:0,78,849	0/0:27,0:27:75.20:0,75,830	0/0:19,0:19:51.12:0,51,549	1/1:0,20:21:59.03:501,59,0	1/1:2,10:12:29.99:260,30,0	0/0:30,0:30:81.21:0,81,887	1/1:4,13:17:38.98:338,39,0	0/0:17,1:18:13.05:0,13,366	0/0:10,1:12:9.87:0,10,313	0/0:21,0:21:57.06:0,57,607	0/0:17,0:17:45.12:0,45,495	0/0:14,0:16:39.82:0,40,414	0/0:21,0:21:42.06:0,42,436	1/1:3,16:19:47.97:417,48,0	0/0:2,0:16:36.83:0,37,183	0/0:29,0:29:69.19:0,69,762	0/0:11,0:11:27.05:0,27,282
chr10	45898889	.	ACGT	A	19920.21	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=12.590;DP=741;FS=6.875;HRun=0;HaplotypeScore=120.7987;InbreedingCoeff=0.9993;MQ=89.02;MQ0=0;MQRankSum=-7.800;QD=39.68;ReadPosRankSum=5.262;VQSLOD=5.6188;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,32:36:84.29:1371,84,0	0/0:14,0:14:39.13:0,39,866	0/0:41,0:41:99:0,103,2087	0/0:28,0:28:69.23:0,69,1428	1/1:1,33:34:87.26:1392,87,0	1/1:0,17:17:45.15:735,45,0	1/1:2,31:33:72.25:1175,72,0	1/1:0,15:14:42.12:623,42,0	1/1:0,23:23:60.20:980,60,0	1/1:3,23:26:69.18:1031,69,0	1/1:1,28:29:78.27:1274,78,0	1/1:1,26:27:51.17:833,51,0	1/1:2,21:23:60.20:980,60,0	1/1:2,26:28:72.25:1175,72,0	1/1:2,35:37:90.31:1470,90,0	1/1:1,18:19:51.17:833,51,0	0/0:31,0:31:87.26:0,87,1892	1/1:0,8:8:21.07:343,21,0	0/0:22,0:22:57.18:0,57,1194	0/0:17,0:17:42.14:0,42,905	0/0:40,0:40:99:0,102,2174	1/1:1,21:22:54.14:842,54,0	1/1:1,29:30:78.08:1244,78,0	1/1:3,33:36:81.75:1323,82,0	1/1:4,22:26:51.17:833,51,0	1/1:3,30:33:90.31:1465,90,0	0/0:33,0:32:96.28:0,96,2053	0/0:13,0:13:39.13:0,39,815
chr10	45899183	.	TA	T	2644.30	PASS	AB=0.849;AC=21;AF=0.375;AN=56;BaseQRankSum=2.528;DP=671;FS=9.314;HRun=13;HaplotypeScore=78.6863;InbreedingCoeff=0.6161;MQ=65.22;MQ0=5;MQRankSum=2.684;QD=8.64;ReadPosRankSum=1.839;VQSLOD=2.3257;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:74.27:0,74,680	0/0:6,0:8:14.70:0,15,116	0/0:35,2:13:1.44:0,1,135	0/0:25,0:16:9.34:0,9,176	1/1:8,26:37:14.42:375,14,0	1/1:3,22:26:32.52:393,33,0	1/1:7,17:25:29.67:221,30,0	0/0:9,0:31:67.32:0,67,375	0/0:24,0:24:58.26:0,58,570	1/1:7,14:21:41.74:306,42,0	1/1:7,21:29:11.18:382,11,0	0/1:12,1:14:10.73:11,0,210	0/0:9,0:11:32.72:0,33,289	0/1:22,0:23:0.63:1,0,319	1/1:4,13:18:34.80:247,35,0	0/1:5,15:21:14.55:225,0,15	0/0:36,0:36:44.31:0,44,704	1/1:3,16:20:34.83:247,35,0	0/0:21,0:23:44.06:0,44,438	0/0:14,0:15:17.19:0,17,287	0/0:13,0:13:26.90:0,27,240	0/0:21,1:23:43.53:0,44,514	0/1:25,3:30:19.73:20,0,350	0/1:12,2:14:10.77:11,0,228	1/1:3,25:28:33.47:408,33,0	0/0:10,0:33:64.57:0,65,368	0/0:35,0:36:48.92:0,49,731	0/0:21,0:21:23.16:0,23,383
chr10	45900483	.	AG	A	1124.98	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.760;DP=678;FS=5.481;HRun=2;HaplotypeScore=64.4599;InbreedingCoeff=0.9997;MQ=84.58;MQ0=0;MQRankSum=-0.659;QD=32.14;ReadPosRankSum=-0.409;VQSLOD=3.0476;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:62,0:62:99:0,175,2546	0/0:19,0:19:57.19:0,57,851	0/0:28,0:28:78.25:0,78,1123	0/0:24,0:24:66.22:0,66,970	0/0:34,0:34:99:0,99,1481	1/1:0,15:15:45.15:584,45,0	1/1:0,20:20:51.17:662,51,0	0/0:23,0:23:66.21:0,66,969	0/0:24,0:24:72.24:0,72,1078	0/0:29,0:29:87.25:0,87,1247	0/0:36,0:36:99:0,108,1617	0/0:29,0:29:87.28:0,87,1285	0/0:15,0:15:45.14:0,45,654	0/0:18,0:18:51.17:0,51,764	0/0:26,0:26:78.26:0,78,1169	0/0:29,0:29:84.28:0,84,1259	0/0:31,0:31:90.30:0,90,1349	0/0:11,0:11:33.11:0,33,495	0/0:20,0:20:60.20:0,60,900	0/0:26,0:26:78.26:0,78,1169	0/0:25,0:25:72.24:0,72,1078	0/0:15,0:15:42.14:0,42,630	0/0:19,0:19:57.19:0,57,854	0/0:25,1:26:36.30:0,36,1033	0/0:15,0:15:39.13:0,39,585	0/0:19,0:19:57.18:0,57,837	0/0:27,0:27:78.26:0,78,1168	0/0:13,0:13:39.13:0,39,584
chr10	45900892	.	C	CT	2791.46	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=4.930;DP=413;FS=4.578;HRun=9;HaplotypeScore=54.8236;InbreedingCoeff=0.8795;MQ=78.11;MQ0=7;MQRankSum=-3.980;QD=18.73;ReadPosRankSum=0.878;VQSLOD=4.0445;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:44.99:0,45,390	0/0:6,0:6:18:0,18,156	0/1:32,0:18:21.69:22,0,85	0/0:31,0:13:14.21:0,14,128	1/1:0,15:15:42.11:461,42,0	1/1:12,3:15:19.06:430,19,0	1/1:5,2:7:21.04:222,21,0	0/0:34,0:35:73.99:0,74,631	0/0:9,0:9:20.99:0,21,182	1/1:5,8:12:24.06:259,24,0	1/1:1,13:15:36.98:400,37,0	0/0:8,0:8:20.99:0,21,182	0/0:11,0:11:17.97:0,18,156	0/0:6,0:6:15:0,15,130	1/1:3,7:10:27.05:282,27,0	1/1:2,9:11:27.07:299,27,0	0/0:22,0:22:41.95:0,42,359	1/1:5,11:16:30.08:332,30,0	0/0:19,0:19:44.99:0,45,390	0/0:10,0:10:17.98:0,18,156	0/0:15,0:16:41.02:0,41,344	0/0:4,0:4:6:0,6,52	0/0:7,0:7:7.46:0,7,97	0/0:9,0:9:24:0,24,208	1/1:4,11:15:27.07:299,27,0	0/0:19,2:21:17.77:0,18,379	0/0:15,0:14:26.98:0,27,233	0/0:14,0:14:32.99:0,33,287
chr10	45900906	.	CTT	C	1802.98	PASS	AB=0.968;AC=15;AF=0.268;AN=56;BaseQRankSum=6.474;DP=393;FS=6.165;HRun=11;HaplotypeScore=63.7062;InbreedingCoeff=0.8287;MQ=66.45;MQ0=12;MQRankSum=-5.057;QD=14.78;ReadPosRankSum=-0.175;VQSLOD=1.9053;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:23:37.43:0,37,128	0/0:5,0:5:12.04:0,12,185	0/0:30,0:12:5.37:0,5,108	0/1:29,0:9:10.09:10,0,73	1/1:2,13:15:42.08:432,42,0	0/0:13,0:14:35.20:0,35,148	0/0:6,0:7:14.97:0,15,52	0/0:31,0:31:64.02:0,64,879	0/0:2,0:7:12.48:0,12,43	1/1:3,7:9:21.04:221,21,0	1/1:5,11:16:32.98:327,33,0	0/0:3,0:7:12.48:0,12,43	0/0:0,0:6:12.23:0,12,43	0/0:2,0:6:7.49:0,7,26	1/1:4,6:10:27.02:264,27,0	1/1:1,8:9:24.06:253,24,0	0/0:18,0:20:50.66:0,51,735	1/1:5,14:19:10.26:267,10,0	0/0:23,0:19:51.13:0,51,735	0/0:12,0:12:36.07:0,36,527	0/0:12,0:12:24.06:0,24,348	0/0:0,0:2:4.72:0,5,15	0/0:1,0:7:14.39:0,14,50	0/0:3,0:11:22.93:0,23,88	1/1:7,6:13:21.04:224,21,0	0/0:18,0:18:33.08:0,33,449	0/0:14,0:14:38.61:0,39,544	0/0:10,0:12:35.60:0,36,501
chr10	45901718	.	AAGG	A	565.08	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=4.157;DP=591;FS=2.924;HRun=0;HaplotypeScore=110.4133;InbreedingCoeff=0.9588;MQ=69.62;MQ0=4;MQRankSum=0.155;QD=22.60;ReadPosRankSum=-1.952;VQSLOD=3.3566;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:51:98.24:0,98,1955	0/0:10,0:10:29.77:0,30,541	0/0:30,0:22:21.44:0,21,501	0/0:33,0:24:26.57:0,27,702	0/0:37,0:36:81.27:0,81,1536	0/0:15,0:14:36.12:0,36,691	0/0:30,0:30:61.50:0,61,1259	1/1:5,12:15:30.09:397,30,0	0/0:14,0:14:30.05:0,30,541	0/0:23,0:22:48.16:0,48,928	0/0:18,0:18:42.14:0,42,840	0/0:23,0:21:54.17:0,54,999	0/0:12,0:12:30.09:0,30,560	0/0:14,0:13:32.99:0,33,493	0/0:17,0:17:27.09:0,27,532	0/0:12,0:12:24.08:0,24,484	0/0:34,0:33:90.28:0,90,1780	0/0:14,0:14:18.06:0,18,357	0/0:14,0:14:36.09:0,36,539	0/0:21,0:21:60.02:0,60,1060	0/0:36,0:35:90.29:0,90,1730	0/0:27,0:27:72.22:0,72,1368	0/0:15,0:15:36.12:0,36,676	0/0:23,0:23:51.17:0,51,1000	0/0:14,0:14:36.08:0,36,658	1/1:1,7:8:21.05:288,21,0	0/0:22,0:22:53.39:0,53,970	0/0:5,0:5:8.90:0,9,127
chr10	45901753	.	A	AGAG	8794.94	PASS	AB=0.863;AC=37;AF=0.685;AN=54;BaseQRankSum=-1.276;DP=666;FS=0.915;HRun=0;HaplotypeScore=148.0555;InbreedingCoeff=0.5426;MQ=55.24;MQ0=25;MQRankSum=-3.088;QD=18.59;ReadPosRankSum=3.190;VQSLOD=4.3100;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:23,28:50:39.18:1231,39,0	0/0:12,0:11:12.76:0,13,138	0/0:39,0:9:12.03:0,12,171	0/0:38,0:17:11.30:0,11,117	1/1:10,22:32:26.30:841,26,0	1/1:7,10:17:25.90:490,26,0	0/1:17,18:34:15.76:435,0,16	./.	1/1:9,10:18:30.46:508,30,0	1/1:12,13:25:41.49:706,41,0	1/1:15,3:18:25.50:438,25,0	1/1:15,3:15:17.90:231,18,0	1/1:9,13:20:36.68:682,37,0	1/1:13,2:12:14.79:271,15,0	1/1:10,10:17:8.45:181,8,0	1/1:5,10:13:17.54:309,18,0	0/0:38,0:36:50.23:0,50,904	1/1:6,13:19:5.74:292,6,0	0/0:19,0:16:26.92:0,27,320	0/1:32,0:32:60.03:60,0,615	0/0:41,0:41:90.22:0,90,1220	1/1:13,16:30:33.11:580,33,0	1/1:6,11:15:20.89:341,21,0	1/1:18,13:31:38.52:682,39,0	0/1:7,8:14:21.69:317,0,22	1/1:12,1:12:13.11:141,13,0	0/1:18,0:18:5.78:6,0,295	0/1:8,0:8:53.70:54,0,111
chr10	45901762	.	G	GGAA	5449.11	PASS	AB=0.985;AC=21;AF=0.375;AN=56;BaseQRankSum=10.668;DP=714;FS=0.342;HRun=0;HaplotypeScore=201.0502;InbreedingCoeff=-0.4608;MQ=55.13;MQ0=23;MQRankSum=-2.208;QD=11.19;ReadPosRankSum=7.714;VQSLOD=3.4766;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:47,1:46:5.87:812,0,6	0/0:13,0:12:32.50:0,33,342	0/0:40,0:12:12.87:0,13,301	0/0:38,0:16:5.56:0,6,184	0/1:33,0:33:86.20:456,0,86	1/1:17,0:16:10.24:313,10,0	0/1:37,0:35:99:231,0,137	0/0:7,0:5:5.67:0,6,41	0/1:20,0:19:11.35:282,0,11	0/1:26,0:25:57.37:388,0,57	0/1:18,0:18:75.38:209,0,75	0/1:22,0:19:73.65:176,0,74	0/1:24,0:22:57.99:375,0,58	0/1:15,1:13:17.63:239,0,18	0/1:24,0:21:74.71:158,0,75	0/1:20,0:18:74.78:214,0,75	0/0:38,0:36:67.08:0,67,1272	0/1:19,0:19:35.29:175,0,35	0/0:24,0:22:53.73:0,54,597	0/1:35,0:35:99:114,0,893	0/0:46,0:46:99:0,123,1762	0/1:32,0:32:99:300,0,103	0/1:18,1:17:17.35:224,0,17	0/1:37,2:38:75.11:456,0,75	0/1:16,0:15:74.06:192,0,74	0/1:14,0:13:23.85:24,0,130	0/0:20,0:20:5.02:0,5,500	0/1:7,1:8:99:113,0,158
chr10	45901819	.	GGAA	G	3186.25	PASS	AB=0.792;AC=12;AF=0.214;AN=56;BaseQRankSum=1.370;DP=818;FS=5.867;HRun=0;HaplotypeScore=271.6410;InbreedingCoeff=-0.1492;MQ=44.12;MQ0=24;MQRankSum=-4.080;QD=11.26;ReadPosRankSum=-0.832;VQSLOD=2.3608;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:20,15:33:12.30:778,0,12	0/1:9,0:9:47.62:73,0,48	1/1:55,0:5:0.17:11,0,0	0/0:45,0:13:15.77:0,16,192	0/0:26,0:26:47.66:0,48,803	0/0:22,0:20:43.08:0,43,748	0/0:48,0:38:74.77:0,75,1352	0/0:16,0:11:9.05:0,9,313	0/1:14,7:22:99:331,0,199	0/0:40,0:36:90.57:0,91,1620	0/0:25,0:25:50.17:0,50,918	0/1:13,18:30:99:449,0,152	0/1:17,6:22:99:381,0,107	0/1:10,9:19:99:247,0,102	0/0:31,0:30:41.90:0,42,1143	0/0:38,0:38:88.08:0,88,1655	0/0:37,0:35:2.41:0,2,1205	0/0:19,0:19:25.66:0,26,637	0/0:20,0:11:29.94:0,30,409	0/0:33,0:33:56.85:0,57,1298	0/0:57,0:56:80.29:0,80,2499	0/1:16,9:21:96.48:485,0,96	0/1:11,3:12:94.68:112,0,95	0/1:27,10:35:84.63:459,0,85	0/0:21,0:21:32.87:0,33,877	0/0:29,0:28:68.93:0,69,1347	0/0:27,1:28:50.50:0,50,1075	0/1:8,0:8:5.25:5,0,287
chr10	45901832	.	GA	G	884.49	PASS	AB=0.865;AC=16;AF=0.286;AN=56;BaseQRankSum=7.763;DP=792;FS=3.579;HRun=2;HaplotypeScore=240.8717;InbreedingCoeff=-0.3840;MQ=40.14;MQ0=25;MQRankSum=-5.258;QD=2.25;ReadPosRankSum=0.114;VQSLOD=-0.5867;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:33,3:33:2.44:2,0,550	0/1:5,1:6:26.43:26,0,55	0/0:50,1:4:5.96:0,6,65	0/0:52,1:16:29.32:0,29,347	0/1:21,4:25:49.78:50,0,472	0/0:21,1:19:11.89:0,12,535	0/1:39,2:31:38.39:38,0,963	0/0:16,0:11:30.09:0,30,420	0/1:21,4:25:62.70:63,0,468	0/0:40,4:40:14.69:0,15,1407	0/1:22,4:26:91.76:92,0,643	0/1:24,7:29:80.30:80,0,282	0/1:14,3:16:34.82:35,0,157	0/1:18,2:19:76.18:76,0,230	0/1:28,3:30:5.10:5,0,827	0/0:36,2:38:54.66:0,55,1281	0/0:33,1:32:75.46:0,75,966	0/0:17,0:17:39.57:0,40,547	0/1:20,2:12:5.84:6,0,366	0/1:20,9:29:99:203,0,793	0/0:46,5:50:61.13:0,61,1606	0/0:21,3:20:13.08:0,13,396	0/1:10,2:10:48.26:48,0,89	0/1:33,4:34:59.71:60,0,362	0/0:22,0:22:45.96:0,46,730	0/0:27,0:26:54.47:0,54,934	0/1:18,8:26:99:171,0,690	0/1:7,2:8:81.40:81,0,159
chr10	45901840	.	AGAG	A	1051.82	PASS	AB=0.980;AC=15;AF=0.268;AN=56;BaseQRankSum=7.400;DP=731;FS=32.516;HRun=0;HaplotypeScore=241.2605;InbreedingCoeff=-0.3824;MQ=38.73;MQ0=26;MQRankSum=-3.787;QD=2.77;ReadPosRankSum=-2.430;VQSLOD=0.9052;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:36,0:33:90.46:90,0,598	0/0:6,0:6:12.01:0,12,156	0/0:45,0:3:3.01:0,3,62	0/1:45,0:14:12.58:13,0,161	0/0:23,0:23:32.76:0,33,497	0/1:20,0:17:12.03:12,0,319	0/0:36,0:28:38.91:0,39,495	0/1:10,5:9:17.25:150,0,17	0/1:24,0:24:91.90:92,0,379	0/0:38,0:35:49.32:0,49,1211	0/0:25,0:25:33.66:0,34,527	0/1:31,0:28:71.83:72,0,314	0/0:15,0:14:9.85:0,10,116	0/1:21,0:20:99:156,0,133	0/1:29,0:27:21.64:22,0,717	0/0:37,0:37:35.63:0,36,1056	0/0:30,0:29:8.40:0,8,662	0/1:13,0:13:14.85:15,0,427	0/0:22,0:12:10.76:0,11,208	0/0:25,0:25:15.01:0,15,663	0/1:44,0:43:93.92:94,0,942	0/1:25,0:21:50.31:50,0,380	0/1:9,0:7:32.32:32,0,86	0/1:32,0:30:99:143,0,255	0/0:20,0:20:47.38:0,47,730	0/1:25,0:24:79.78:242,0,80	0/0:26,0:26:34.18:0,34,775	0/1:7,0:6:24.14:24,0,173
chr10	45902031	.	A	AG	58.29	PASS	AB=0.667;AC=1;AF=0.019;AN=54;BaseQRankSum=8.496;DP=783;FS=7.673;HRun=0;HaplotypeScore=224.6924;InbreedingCoeff=-0.0240;MQ=48.85;MQ0=15;MQRankSum=-5.908;QD=4.86;ReadPosRankSum=1.347;VQSLOD=2.4761;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,1:42:16.49:0,16,1162	0/0:8,0:8:24.07:0,24,318	0/0:30,0:15:29.65:0,30,358	0/0:34,0:17:26.91:0,27,340	0/0:34,0:34:90.12:0,90,1195	0/0:19,0:18:5.04:0,5,599	0/0:47,0:43:92.34:0,92,1564	./.	0/0:20,0:19:3.85:0,4,515	0/0:47,0:45:99:0,126,1652	0/0:31,0:30:78.02:0,78,1014	0/0:32,0:30:77.95:0,78,1010	0/0:29,0:26:21.49:0,21,732	0/0:28,0:27:59.98:0,60,786	0/0:31,0:30:87.25:0,87,1166	0/0:40,0:39:84.43:0,84,1358	0/0:27,2:28:18.57:0,19,850	0/0:22,0:22:43.65:0,44,656	0/0:20,0:16:48.13:0,48,645	0/0:26,0:25:75.25:0,75,1040	0/0:33,0:33:68.82:0,69,879	0/0:28,0:28:83.41:0,83,1070	0/0:24,0:23:66.18:0,66,896	0/0:40,1:37:43.82:0,44,1077	0/0:21,0:21:60.10:0,60,796	0/1:6,6:12:23.17:132,0,23	0/0:24,0:23:69.16:0,69,916	0/0:23,0:23:69.23:0,69,959
chr10	45902032	.	A	AGG	424.13	PASS	AB=0.894;AC=4;AF=0.074;AN=54;BaseQRankSum=9.279;DP=804;FS=10.851;HRun=0;HaplotypeScore=246.4077;InbreedingCoeff=-0.0780;MQ=48.66;MQ0=16;MQRankSum=-4.790;QD=3.86;ReadPosRankSum=-0.578;VQSLOD=1.0594;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:47,1:47:99:205,0,1317	0/0:9,0:9:24.07:0,24,360	0/0:32,0:16:31.44:0,31,402	0/0:34,0:17:34.73:0,35,487	0/0:34,0:34:93.10:0,93,1426	0/1:18,1:18:6.35:6,0,713	0/0:50,1:44:79.33:0,79,1828	./.	0/0:19,1:19:1.21:0,1,592	0/0:46,1:45:99:0,123,1890	0/0:33,0:32:72.83:0,73,1157	0/0:32,0:30:74.57:0,75,1149	0/1:30,0:27:70.39:70,0,866	0/0:27,0:26:62.51:0,63,923	0/0:31,0:30:87.28:0,87,1368	0/0:41,0:40:68.52:0,69,1599	0/0:28,2:29:5.55:0,6,1006	0/0:23,0:23:16.50:0,17,718	0/0:20,0:16:48.16:0,48,749	0/0:25,0:25:75.26:0,75,1216	0/0:34,0:35:67.12:0,67,1045	0/0:28,0:28:83.42:0,83,1253	0/0:25,0:24:63.22:0,63,1026	0/0:41,0:37:7.75:0,8,1161	0/0:21,0:21:40.19:0,40,880	0/1:6,6:12:14.34:246,0,14	0/0:24,0:23:66.22:0,66,1049	0/0:25,0:25:69.24:0,69,1122
chr10	45902082	.	A	AGAG	3553.36	PASS	AB=0.979;AC=26;AF=0.464;AN=56;BaseQRankSum=1.816;DP=522;FS=10.017;HRun=0;HaplotypeScore=153.0097;InbreedingCoeff=0.2459;MQ=44.21;MQ0=12;MQRankSum=-2.821;QD=10.83;ReadPosRankSum=2.847;VQSLOD=3.0416;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:42,0:41:99:125,0,561	0/0:5,0:5:12.04:0,12,174	0/0:29,0:9:11.57:0,12,140	0/0:30,0:13:1.25:0,1,131	1/1:8,6:14:18.06:309,18,0	0/1:9,0:10:45.69:46,0,183	0/1:34,0:27:18.73:19,0,577	1/1:9,2:10:2.01:243,2,0	0/1:13,0:13:0.12:0,0,250	1/1:15,7:20:41.40:708,41,0	1/1:8,6:14:23.65:354,24,0	0/0:11,0:10:20.65:0,21,212	0/1:13,0:12:17.18:17,0,231	0/1:19,0:19:14.71:15,0,228	1/1:10,3:13:23.99:318,24,0	0/1:11,4:13:12.98:246,0,13	0/0:25,0:25:48.97:0,49,599	1/1:15,2:16:3.55:243,4,0	0/0:15,0:14:27.02:0,27,344	0/0:13,0:12:24.01:0,24,321	0/0:32,0:31:50.06:0,50,603	0/1:19,0:19:70.76:71,0,306	0/1:12,0:11:10.68:11,0,216	0/1:33,0:32:3.60:4,0,369	1/1:11,1:12:21.32:443,21,0	1/1:12,3:15:22.88:384,23,0	0/0:18,0:18:8.07:0,8,435	0/0:16,0:16:30.05:0,30,551
chr10	45902094	.	G	GGAA	1936.21	PASS	AB=0.973;AC=21;AF=0.375;AN=56;BaseQRankSum=6.674;DP=503;FS=18.225;HRun=0;HaplotypeScore=149.6037;InbreedingCoeff=-0.1284;MQ=40.29;MQ0=21;MQRankSum=-2.445;QD=6.21;ReadPosRankSum=2.655;VQSLOD=1.4745;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:40,3:42:99:151,0,901	0/0:7,0:7:12.04:0,12,204	0/0:28,0:6:8.19:0,8,170	0/0:33,0:12:21.97:0,22,266	1/1:9,0:9:17.92:177,18,0	0/1:11,0:11:57.20:57,0,263	0/1:29,0:22:23.37:23,0,775	0/1:15,0:14:99:127,0,124	0/0:12,0:11:18.57:0,19,335	0/1:20,0:19:31.26:358,0,31	1/1:12,0:12:23.76:229,24,0	0/0:10,0:10:23.91:0,24,324	0/1:14,1:12:25.19:25,0,325	0/1:16,1:17:22.46:22,0,340	0/1:10,0:10:5.11:110,0,5	0/1:14,0:12:83.05:142,0,83	0/0:25,0:25:56.54:0,57,799	0/1:16,0:14:74.60:124,0,75	0/0:18,0:14:36.03:0,36,500	0/0:10,0:10:30.07:0,30,444	0/0:33,0:32:68.71:0,69,895	0/1:14,2:16:84.95:85,0,482	0/1:10,1:11:26.95:27,0,326	0/1:27,1:26:9.99:10,0,479	1/1:11,0:11:14.76:242,15,0	0/1:16,0:16:58.56:189,0,59	0/1:19,0:19:12.34:12,0,602	0/0:15,0:15:20.96:0,21,661
chr10	45902099	.	A	AGGAGG	1742.34	PASS	AB=0.962;AC=22;AF=0.393;AN=56;BaseQRankSum=7.734;DP=496;FS=36.996;HRun=0;HaplotypeScore=166.9284;InbreedingCoeff=-0.2153;MQ=43.01;MQ0=22;MQRankSum=-2.140;QD=5.53;ReadPosRankSum=1.005;VQSLOD=1.1119;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:39,3:41:99:316,0,1291	0/0:8,0:8:15.50:0,15,302	0/0:29,0:5:15.05:0,15,300	0/0:35,0:13:15.55:0,16,342	1/1:9,0:9:8.97:56,9,0	0/1:10,0:10:54.28:54,0,370	0/1:27,0:22:32.87:33,0,1051	0/1:17,0:17:16.39:16,0,262	0/0:13,0:11:30.01:0,30,544	0/1:21,0:21:99:199,0,158	1/1:10,0:12:20.29:198,20,0	0/0:9,0:9:21.07:0,21,460	0/1:12,1:10:55.45:55,0,492	0/1:15,1:16:51.57:52,0,437	0/1:11,0:11:10.22:80,0,10	0/1:14,0:12:41.56:42,0,102	0/0:25,0:25:39.36:0,39,1081	1/1:14,0:13:3.23:174,3,0	0/0:20,0:16:44.97:0,45,726	0/0:10,0:10:27.02:0,27,550	0/0:31,0:30:47.39:0,47,1192	0/1:14,2:16:99:130,0,652	0/1:9,1:10:58.11:58,0,413	0/1:25,1:24:89.19:89,0,690	0/1:11,0:11:5.63:110,0,6	0/1:12,0:13:99:131,0,128	0/1:14,0:16:84.22:84,0,793	0/1:14,0:15:36.39:36,0,858
chr10	45902106	.	A	AGAG	1786.86	PASS	AB=0.941;AC=22;AF=0.407;AN=54;BaseQRankSum=3.311;DP=475;FS=33.418;HRun=0;HaplotypeScore=141.5832;InbreedingCoeff=0.0918;MQ=42.60;MQ0=23;MQRankSum=-3.285;QD=6.90;ReadPosRankSum=2.993;VQSLOD=1.5834;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:33,7:39:99:408,0,163	0/0:7,0:7:8.93:0,9,85	0/0:26,1:4:2.98:0,3,21	0/0:32,0:11:0.06:0,0,95	./.	0/0:7,0:9:5.85:0,6,35	0/0:22,0:22:25.29:0,25,188	0/0:14,0:13:11.18:0,11,108	0/1:10,2:11:2.97:144,0,3	0/1:20,0:18:99:139,0,101	1/1:11,0:13:12.87:107,13,0	1/1:6,4:10:16.25:243,16,0	0/1:13,1:11:58.30:67,0,58	1/1:10,4:14:8.99:121,9,0	0/0:7,0:7:5.51:0,6,50	0/1:13,0:12:23.68:24,0,54	0/0:24,0:24:5.25:0,5,487	0/1:15,0:13:26.60:27,0,99	0/0:18,0:15:9.15:0,9,342	0/0:9,0:9:18.06:0,18,257	0/0:28,0:27:22.07:0,22,525	0/1:12,2:14:57.50:268,0,57	1/1:7,3:10:8.96:140,9,0	1/1:24,2:23:17.86:177,18,0	0/1:13,0:13:33.32:53,0,33	1/1:12,0:12:1.51:15,2,0	0/1:18,0:18:16.12:16,0,332	0/1:13,0:13:8.09:8,0,235
chr10	45902131	.	GCA	G	88.30	PASS	AB=0.933;AC=9;AF=0.167;AN=54;BaseQRankSum=3.725;DP=344;FS=11.677;HRun=0;HaplotypeScore=97.7146;InbreedingCoeff=-0.2265;MQ=40.74;MQ0=15;MQRankSum=-2.852;QD=0.75;ReadPosRankSum=-2.906;VQSLOD=0.3499;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:24:17.70:18,0,443	0/0:5,0:5:9.03:0,9,167	./.	0/0:28,0:8:11.87:0,12,167	0/0:6,0:6:3.01:0,3,33	0/0:5,0:5:10.91:0,11,79	0/0:14,0:13:32.04:0,32,234	0/0:18,0:15:6.81:0,7,671	0/0:5,0:4:9.03:0,9,145	0/0:11,1:10:1.03:0,1,263	0/1:9,1:9:15.33:15,0,43	0/0:8,0:8:14.95:0,15,175	0/0:5,0:4:12.04:0,12,212	0/1:8,0:7:15.26:15,0,25	0/1:7,0:6:9.47:9,0,116	0/1:13,0:11:9.49:9,0,178	0/0:21,0:21:33.85:0,34,992	0/1:5,4:8:77.51:95,0,78	0/0:12,0:9:27.05:0,27,502	0/0:9,0:8:24.03:0,24,428	0/1:27,1:26:25.70:26,0,692	0/0:10,0:10:11.73:0,12,249	0/0:7,0:6:6.02:0,6,105	0/1:8,2:8:26.33:26,0,131	0/1:9,0:9:1.41:1,0,220	0/0:11,0:10:27.09:0,27,530	0/0:12,0:12:24.98:0,25,548	0/0:10,0:9:15.28:0,15,356
chr10	45902133	.	A	AGAG	1650.56	PASS	AB=1.000;AC=30;AF=0.556;AN=54;BaseQRankSum=3.071;DP=356;FS=2.158;HRun=0;HaplotypeScore=105.9847;InbreedingCoeff=0.5250;MQ=40.31;MQ0=18;MQRankSum=-3.549;QD=9.60;ReadPosRankSum=-4.924;VQSLOD=2.0356;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:19,3:21:4.88:172,5,0	0/0:4,0:4:7.83:0,8,86	./.	0/0:32,0:8:3.01:0,3,42	1/1:7,1:7:3.01:61,3,0	1/1:4,0:5:7.63:58,8,0	0/1:10,0:13:46.30:46,0,78	0/0:18,0:15:17.56:0,18,231	0/1:5,0:4:33.11:54,0,33	0/1:13,0:11:5.71:46,0,6	1/1:10,1:10:11.09:109,11,0	1/1:8,2:10:11.96:179,12,0	1/1:5,0:4:5.23:37,5,0	1/1:7,2:8:2.09:19,2,0	1/1:7,0:6:10.18:87,10,0	1/1:11,1:11:16.23:207,16,0	0/0:20,0:20:39.03:0,39,516	1/1:10,1:9:12.80:135,13,0	0/0:13,0:9:15.05:0,15,213	0/0:10,0:7:12.04:0,12,173	0/0:27,0:27:21.67:0,22,425	1/1:8,1:10:8.52:161,9,0	1/1:5,1:5:7.24:61,7,0	0/1:14,0:11:26.98:119,0,27	1/1:5,4:9:15.05:291,15,0	0/0:11,0:10:27.09:0,27,365	0/0:12,0:12:23.97:0,24,274	0/0:9,0:8:11.99:0,12,131
chr10	45902150	.	A	AGGAG	398.85	PASS	AB=0.951;AC=14;AF=0.250;AN=56;BaseQRankSum=2.636;DP=336;FS=18.427;HRun=0;HaplotypeScore=93.1233;InbreedingCoeff=-0.1251;MQ=45.81;MQ0=13;MQRankSum=-1.921;QD=3.69;ReadPosRankSum=0.243;VQSLOD=0.2522;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:16,3:18:99:184,0,183	0/0:6,0:6:15.05:0,15,256	0/0:40,0:5:5.78:0,6,84	0/0:40,0:7:8.32:0,8,84	0/1:6,0:5:11.44:11,0,40	0/1:8,0:8:41.40:41,0,151	0/0:12,0:12:31.96:0,32,351	0/0:8,0:6:18.02:0,18,334	0/1:5,0:5:8.25:8,0,134	0/1:7,0:6:0.05:0,0,102	0/1:10,0:9:1.87:2,0,166	0/1:8,0:8:19.90:20,0,149	0/1:4,1:5:40.05:40,0,103	0/0:9,0:9:15.01:0,15,172	0/0:8,0:9:12.23:0,12,181	0/1:15,0:14:62.46:62,0,258	0/0:22,0:22:60.20:0,60,1094	0/1:9,0:8:8.72:9,0,80	0/0:9,0:6:18.02:0,18,332	0/0:9,0:7:10.21:0,10,249	0/0:26,0:25:42.03:0,42,670	0/1:6,0:6:26.92:72,0,27	0/1:3,0:4:16.45:16,0,39	0/0:14,0:11:22.25:0,22,307	1/1:5,0:5:13.38:82,13,0	0/0:10,0:9:27.09:0,27,538	0/0:10,0:10:23.41:0,23,448	0/0:4,0:4:12.04:0,12,217
chr10	45902157	.	A	AGAG	4198.18	PASS	AB=0.800;AC=33;AF=0.589;AN=56;BaseQRankSum=0.730;DP=398;FS=16.351;HRun=0;HaplotypeScore=88.7112;InbreedingCoeff=0.6434;MQ=45.19;MQ0=17;MQRankSum=-2.768;QD=20.18;ReadPosRankSum=-1.158;VQSLOD=1.6698;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:16,3:19:90.26:295,0,90	1/1:1,6:8:15.05:290,15,0	0/0:47,0:5:9.02:0,9,111	0/0:47,0:7:2.64:0,3,36	0/0:10,0:9:12.31:0,12,164	1/1:5,0:9:18.06:280,18,0	1/1:8,0:14:24.96:375,25,0	1/1:8,0:7:8.93:66,9,0	1/1:7,1:7:9.02:148,9,0	0/0:7,0:6:12.04:0,12,154	0/0:12,0:11:27.09:0,27,375	1/1:5,6:11:18.06:365,18,0	1/1:7,1:7:6.23:127,6,0	0/1:10,3:13:15.37:248,0,15	0/0:12,0:12:21.06:0,21,288	0/0:15,0:17:14.11:0,14,449	0/0:20,0:21:54.15:0,54,746	0/0:11,0:9:17.48:0,17,199	1/1:5,0:5:8.86:93,9,0	1/1:7,1:9:6.02:78,6,0	0/1:18,0:24:7.94:283,0,8	1/1:5,3:7:18.02:286,18,0	1/1:4,1:5:5.98:81,6,0	1/1:11,9:16:35.98:627,36,0	0/0:5,0:5:15.05:0,15,196	1/1:7,0:13:20.96:221,21,0	1/1:9,0:12:26.99:296,27,0	1/1:3,0:4:3.01:40,3,0
chr10	45902246	.	AG	A	1666.76	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=5.002;DP=665;FS=4.870;HRun=4;HaplotypeScore=109.7766;InbreedingCoeff=0.9116;MQ=70.85;MQ0=6;MQRankSum=0.940;QD=8.82;ReadPosRankSum=1.300;VQSLOD=0.6443;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:33,0:33:5.09:113,5,0	0/0:13,0:13:33.02:0,33,436	0/0:66,0:39:49.80:0,50,838	0/0:64,0:30:35.29:0,35,459	0/0:27,0:27:77.70:0,78,636	1/1:2,28:30:57.27:864,57,0	1/1:0,19:19:45.14:538,45,0	0/0:21,0:21:54.08:0,54,672	1/1:20,0:19:22.45:58,22,0	0/0:24,0:24:71.86:0,72,623	0/0:21,0:21:53.90:0,54,451	1/1:11,0:11:12.97:38,13,0	1/1:17,0:17:12.31:78,12,0	1/1:10,0:10:13:36,13,0	0/0:15,0:15:44.97:0,45,383	0/0:7,0:7:20.99:0,21,181	0/0:32,0:32:79.94:0,80,1169	0/0:19,0:19:56.74:0,57,473	0/0:25,0:25:72.18:0,72,936	0/0:24,0:24:72.24:0,72,1002	0/0:19,0:19:54.07:0,54,726	1/1:15,0:15:18.26:52,18,0	1/1:15,0:15:20.81:66,21,0	0/1:19,0:19:3.33:34,0,3	0/0:23,0:22:62.90:0,63,529	0/0:22,0:22:66.20:0,66,890	0/0:20,0:20:51.14:0,51,675	0/0:31,0:31:79.39:0,79,1193
chr10	45902250	.	G	GT	4009.17	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-10.854;DP=685;FS=3.827;HRun=8;HaplotypeScore=104.8823;InbreedingCoeff=0.9711;MQ=69.69;MQ0=6;MQRankSum=1.592;QD=28.23;ReadPosRankSum=0.857;VQSLOD=3.0213;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:36:48.98:0,49,149	0/0:14,0:14:30.01:0,30,274	0/0:66,1:40:24.74:0,25,426	0/0:70,0:32:4.30:0,4,199	1/1:6,21:27:63.19:727,63,0	0/0:30,0:30:69.55:0,70,324	0/0:22,0:22:50.37:0,50,245	0/0:19,0:19:50.98:0,51,451	0/0:1,0:19:36.67:0,37,108	1/1:4,21:25:38.71:689,39,0	1/1:1,21:22:57.04:613,57,0	0/0:4,0:13:23.97:0,24,77	0/0:4,0:17:25.12:0,25,90	0/0:4,0:11:21.33:0,21,66	1/1:3,12:15:36.11:416,36,0	1/1:0,9:9:21.06:242,21,0	0/0:31,0:31:89.86:0,90,793	1/1:5,16:21:57.12:633,57,0	0/0:25,0:25:60:0,60,540	0/0:24,0:24:72.04:0,72,658	0/0:20,0:20:51.02:0,51,466	0/0:0,0:14:28.52:0,29,84	0/0:0,0:15:26.29:0,26,78	0/0:5,0:17:23.13:0,23,72	1/1:2,21:22:60.18:689,60,0	0/0:22,1:23:31.41:0,31,538	0/0:20,0:20:50.85:0,51,441	0/0:32,0:32:93.86:0,94,815
chr10	45904175	.	CT	C	1194.28	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.899;DP=664;FS=1.236;HRun=7;HaplotypeScore=68.2512;InbreedingCoeff=0.9998;MQ=68.50;MQ0=0;MQRankSum=-0.338;QD=25.96;ReadPosRankSum=1.879;VQSLOD=4.4049;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:96.27:0,96,1178	0/0:11,0:11:33.07:0,33,387	0/0:23,0:22:47.87:0,48,546	0/0:24,0:20:41.54:0,42,493	0/0:23,0:23:63.19:0,63,778	1/1:1,23:24:69.16:704,69,0	1/1:1,21:22:60.14:612,60,0	0/0:22,0:22:63.20:0,63,793	0/0:24,0:24:63.15:0,63,751	0/0:30,0:30:84.24:0,84,1008	0/0:30,0:30:78.23:0,78,955	0/0:24,0:24:69.20:0,69,845	0/0:29,0:29:81.23:0,81,993	0/0:22,0:22:60.18:0,60,742	0/0:30,0:30:84.26:0,84,1044	0/0:16,0:16:45.14:0,45,566	0/0:21,0:21:57.05:0,57,694	0/0:20,0:20:54.17:0,54,679	0/0:25,0:25:57.15:0,57,682	0/0:18,0:18:48.13:0,48,589	0/0:24,0:24:69.22:0,69,868	0/0:27,0:27:78.25:0,78,979	0/0:23,0:23:66.20:0,66,811	0/0:24,0:24:69.22:0,69,868	0/0:18,0:18:48.15:0,48,604	0/0:26,0:26:69.21:0,69,854	0/0:25,0:25:72.22:0,72,892	0/0:21,0:21:54.15:0,54,664
chr10	45905561	.	C	CAAAGA	6440.21	PASS	AB=0.824;AC=16;AF=0.286;AN=56;BaseQRankSum=1.678;DP=640;FS=32.483;HRun=0;HaplotypeScore=168.2582;InbreedingCoeff=0.8245;MQ=65.61;MQ0=9;MQRankSum=-10.562;QD=30.52;ReadPosRankSum=-2.352;VQSLOD=2.8785;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:15,14:29:36.12:924,36,0	0/0:11,0:11:15.05:0,15,277	0/1:42,0:18:4.92:5,0,83	0/0:60,0:43:36.38:0,36,471	0/0:16,0:16:16.29:0,16,128	0/0:18,0:18:30.10:0,30,554	0/0:24,0:24:42.14:0,42,773	0/0:19,0:19:9.03:0,9,166	1/1:7,9:17:24.08:654,24,0	0/0:24,0:24:25.74:0,26,167	0/0:22,0:22:40.34:0,40,239	1/1:7,11:18:26.84:767,27,0	1/1:7,10:17:30.10:843,30,0	1/1:11,8:19:18.06:511,18,0	0/0:24,0:24:39.35:0,39,252	0/0:20,0:20:22.58:0,23,161	0/0:26,0:26:54.18:0,54,976	0/0:19,0:19:21.60:0,22,165	0/0:23,0:23:33.11:0,33,589	0/0:23,0:24:45.15:0,45,811	0/0:13,0:13:18.06:0,18,332	1/1:13,16:29:54.14:1373,54,0	0/1:10,12:22:19.34:895,0,19	1/1:8,9:18:18.06:468,18,0	0/0:17,0:17:17.29:0,17,114	0/0:32,0:32:78.08:0,78,1368	0/0:26,0:26:51.17:0,51,899	0/0:11,0:11:24.08:0,24,444
chr10	45905575	.	G	GAA	4730.02	PASS	AB=1.000;AC=22;AF=0.393;AN=56;BaseQRankSum=15.208;DP=621;FS=25.764;HRun=4;HaplotypeScore=133.7928;InbreedingCoeff=0.3979;MQ=66.45;MQ0=14;MQRankSum=-6.731;QD=16.48;ReadPosRankSum=6.228;VQSLOD=0.8009;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:31,0:30:63.68:64,0,441	0/0:10,0:10:27.09:0,27,359	0/0:49,0:17:37.40:0,37,395	0/0:60,0:39:56.60:0,57,812	1/1:15,0:15:39.03:438,39,0	0/0:14,0:14:33.11:0,33,439	0/0:22,0:22:57.18:0,57,759	0/0:17,0:17:45.13:0,45,576	0/1:14,0:14:80.48:80,0,115	1/1:18,2:20:57.03:689,57,0	1/1:23,1:24:65.83:734,66,0	0/1:14,0:14:13.36:120,0,13	0/1:14,0:14:82.91:115,0,83	0/1:15,0:15:59.12:59,0,205	1/1:14,3:17:45.08:509,45,0	1/1:15,4:19:42.09:519,42,0	0/0:27,0:27:72.24:0,72,957	1/1:17,1:18:10.75:494,11,0	0/0:24,0:23:60.17:0,60,782	0/0:23,0:23:56.52:0,57,720	0/0:9,0:9:27.05:0,27,340	0/1:27,0:27:99:186,0,304	0/1:23,0:23:99:130,0,220	0/1:20,0:20:50.08:50,0,295	1/1:14,2:16:42.11:543,42,0	0/0:34,0:34:59.13:0,59,1185	0/0:29,0:29:72.17:0,72,918	0/0:14,0:14:42.14:0,42,558
chr10	45905577	.	AAAG	A	4664.18	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=8.855;DP=619;FS=4.000;HRun=0;HaplotypeScore=143.1011;InbreedingCoeff=0.9990;MQ=65.65;MQ0=14;MQRankSum=1.136;QD=36.73;ReadPosRankSum=1.911;VQSLOD=5.2717;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:30:66.20:0,66,1121	0/0:9,0:9:27.09:0,27,554	0/0:51,0:16:42.12:0,42,539	0/0:59,0:38:45.03:0,45,1135	1/1:5,11:16:44.74:511,45,0	0/0:15,0:15:36.09:0,36,732	0/0:23,0:23:66.22:0,66,1335	0/0:18,0:18:48.14:0,48,743	0/0:14,0:14:30.09:0,30,477	1/1:8,12:20:56.73:772,57,0	1/1:3,21:24:69.19:923,69,0	0/0:14,0:14:26.83:0,27,437	0/0:14,0:14:33.11:0,33,542	0/0:15,0:15:33.11:0,33,531	1/1:4,14:18:48.14:673,48,0	1/1:5,12:17:42.13:585,42,0	0/0:26,0:26:75.26:0,75,1566	1/1:3,14:17:26.14:633,26,0	0/0:27,0:26:69.23:0,69,1318	0/0:21,0:21:43.65:0,44,1168	0/0:10,0:10:28.65:0,29,572	0/0:25,0:25:72.23:0,72,1230	0/0:23,0:23:60.15:0,60,942	0/0:19,0:19:45.15:0,45,725	1/1:4,11:15:44.76:567,45,0	0/0:32,1:33:49.61:0,50,1943	0/0:29,0:29:78.20:0,78,1506	0/0:16,0:16:48.16:0,48,919
chr10	45905585	.	G	GA	4213.46	PASS	AB=1.000;AC=22;AF=0.393;AN=56;BaseQRankSum=14.914;DP=594;FS=32.687;HRun=4;HaplotypeScore=120.1900;InbreedingCoeff=0.4040;MQ=63.40;MQ0=14;MQRankSum=-5.803;QD=15.90;ReadPosRankSum=3.694;VQSLOD=3.0301;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:24:86.57:87,0,299	0/0:9,0:9:21.06:0,21,252	0/0:53,0:20:20.26:0,20,362	0/0:52,0:32:64.51:0,65,767	1/1:0,20:20:46.90:529,47,0	0/0:14,0:14:39.12:0,39,467	0/0:21,0:21:63.19:0,63,755	0/0:17,0:17:45.14:0,45,538	0/1:13,0:13:36.09:36,0,149	1/1:3,13:16:43.06:530,43,0	1/1:2,22:24:71.93:774,72,0	0/1:14,0:14:50.30:50,0,80	0/1:14,0:14:32.33:32,0,48	0/1:13,0:13:11.79:12,0,107	1/1:2,14:16:47.71:539,48,0	1/1:2,12:14:40.53:428,41,0	0/0:27,0:27:75.23:0,75,899	1/1:2,16:19:51.12:609,51,0	0/0:26,0:25:66.20:0,66,791	0/0:20,0:20:48.01:0,48,554	0/0:11,0:11:27.08:0,27,324	0/1:23,0:23:96.49:96,0,162	0/1:21,0:21:29.09:29,0,238	0/1:19,0:19:40.38:40,0,265	1/1:3,11:14:35.86:422,36,0	0/0:33,1:34:52.71:0,53,1038	0/0:27,0:27:75.23:0,75,899	0/0:17,0:17:45.14:0,45,540
chr10	45905728	.	TTTTTTTTTTTTTTTTC	T	1684.19	PASS	AB=0.558;AC=3;AF=0.054;AN=56;BaseQRankSum=7.591;DP=519;FS=9.318;HRun=0;HaplotypeScore=159.9963;InbreedingCoeff=0.5582;MQ=48.79;MQ0=59;MQRankSum=-0.423;QD=43.18;ReadPosRankSum=2.686;VQSLOD=2.6017;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:24:65.25:0,65,2439	0/0:8,0:8:21.07:0,21,1003	0/0:37,0:9:10.61:0,11,269	0/0:23,0:6:14.53:0,15,404	0/0:17,0:13:36.12:0,36,1696	0/0:22,0:16:39.13:0,39,2268	0/0:15,0:14:36.12:0,36,1685	1/1:4,11:14:35.32:689,35,0	0/0:11,0:9:24.08:0,24,1132	0/0:26,0:23:69.23:0,69,3020	0/0:14,0:13:33.11:0,33,1605	0/0:11,0:8:24.08:0,24,1355	0/0:9,0:7:18.06:0,18,768	0/0:9,0:5:6.02:0,6,332	0/0:13,0:9:15.05:0,15,792	0/0:13,0:12:30.09:0,30,1432	0/0:26,0:18:30.10:0,30,1376	0/0:25,0:22:59.69:0,60,2915	0/0:22,0:18:51.16:0,51,1963	0/0:16,0:12:36.12:0,36,1419	0/0:14,0:9:27.07:0,27,934	0/0:8,0:5:15.05:0,15,623	0/0:11,0:10:30.10:0,30,1706	0/0:29,0:25:22.68:0,23,2138	0/0:16,0:15:42.13:0,42,1971	0/1:5,19:21:64.98:1101,0,65	0/0:28,0:24:69.24:0,69,2384	0/0:29,0:19:57.19:0,57,2334
chr10	45906823	.	GCA	G	1883.98	PASS	AB=0.940;AC=30;AF=0.577;AN=52;BaseQRankSum=3.525;DP=548;FS=1.386;HRun=0;HaplotypeScore=100.0219;InbreedingCoeff=0.2695;MQ=61.67;MQ0=4;MQRankSum=1.978;QD=4.61;ReadPosRankSum=3.841;VQSLOD=2.6979;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:32,0:31:4.94:136,0,5	1/1:3,0:6:2.82:14,3,0	./.	./.	1/1:14,9:25:18.05:199,18,0	0/1:15,0:14:0:0,0,0	0/1:25,0:26:0:0,0,0	0/1:7,0:8:0.28:0,0,0	0/1:21,1:22:42.62:86,0,43	1/1:11,11:24:38.40:320,38,0	1/1:9,2:12:1.90:104,2,0	0/1:19,0:19:13.94:14,0,81	0/1:25,0:24:19.96:75,0,20	1/1:24,0:23:14.57:88,15,0	1/1:5,10:15:15.04:165,15,0	1/1:0,7:7:14.99:151,15,0	0/0:27,0:29:36:0,36,444	0/1:18,12:32:20.25:197,0,20	0/0:21,0:21:14.93:0,15,153	0/0:21,0:21:18.96:0,19,154	0/0:20,0:19:6:0,6,51	0/1:19,0:18:10.37:10,0,18	1/1:14,0:14:4.12:18,4,0	0/1:27,1:28:40.10:103,0,40	1/1:18,4:25:35.62:285,36,0	1/1:16,0:29:9.46:81,9,0	0/0:5,0:20:6.48:0,6,59	0/0:0,0:14:10.95:0,11,53
chr10	45907564	.	CCATTA	C	5196.08	PASS	AC=16;AF=0.308;AN=52;BaseQRankSum=-1.931;DP=455;FS=6.280;HRun=0;HaplotypeScore=102.7789;InbreedingCoeff=0.9827;MQ=33.79;MQ0=42;MQRankSum=-0.758;QD=46.39;ReadPosRankSum=5.113;VQSLOD=4.2599;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,23:22:48.16:1016,48,0	0/0:9,0:9:27.09:0,27,834	./.	./.	0/0:26,0:25:63.21:0,63,1711	0/0:14,0:12:24.08:0,24,703	0/0:15,0:12:36.12:0,36,1003	0/0:31,0:28:75.26:0,75,2254	1/1:0,11:11:21.07:430,21,0	0/0:15,0:14:42.14:0,42,1271	0/0:19,0:18:45.11:0,45,1289	1/1:0,11:11:30.10:625,30,0	1/1:4,22:23:60.21:1302,60,0	1/1:0,15:15:42.14:911,42,0	0/0:17,0:17:51.17:0,51,1501	0/0:19,0:18:48.16:0,48,1465	0/0:33,0:30:45.15:0,45,1328	0/0:25,0:12:33.11:0,33,997	0/0:13,0:10:27.09:0,27,801	0/0:18,0:16:45.13:0,45,1119	0/0:7,0:6:18.06:0,18,396	1/1:0,4:4:9.03:195,9,0	1/1:1,10:11:18.06:390,18,0	1/1:3,6:6:15.05:326,15,0	0/0:24,0:24:66.22:0,66,1876	0/0:19,0:17:51.18:0,51,1613	0/0:17,0:17:51.18:0,51,1606	0/0:17,0:13:30.10:0,30,903
chr10	45908172	.	GT	G	10966.51	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=20.365;DP=788;FS=13.996;HRun=5;HaplotypeScore=117.0295;InbreedingCoeff=0.9997;MQ=73.39;MQ0=0;MQRankSum=-3.308;QD=29.80;ReadPosRankSum=3.840;VQSLOD=3.3196;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:59,0:59:99:0,149,2023	1/1:0,17:17:48.14:543,48,0	0/0:28,0:27:72.69:0,73,929	0/0:36,0:36:86.36:0,86,1077	1/1:1,30:31:84.23:944,84,0	0/0:29,0:29:78.14:0,78,986	0/0:35,0:35:96.27:0,96,1254	1/1:5,23:28:69.14:750,69,0	0/0:38,0:37:89.82:0,90,1346	1/1:3,34:37:99:1119,102,0	1/1:1,15:16:45.09:495,45,0	0/0:28,0:28:81.27:0,81,1096	0/0:32,0:32:87.26:0,87,1135	0/0:26,0:26:54.68:0,55,963	1/1:0,39:39:93.27:1053,93,0	1/1:1,26:27:72.21:814,72,0	0/0:33,0:33:84.21:0,84,1086	1/1:1,16:17:42.12:475,42,0	1/1:1,17:18:50.34:541,50,0	1/1:0,12:12:36.10:408,36,0	1/1:0,51:51:99:1595,141,0	0/0:32,0:32:96.28:0,96,1256	0/0:19,0:19:57.18:0,57,752	0/0:25,0:24:69.10:0,69,804	1/1:0,19:19:48.14:544,48,0	1/1:3,24:27:72.20:815,72,0	1/1:0,21:21:54.14:599,54,0	1/1:0,8:8:24.07:272,24,0
chr10	45908332	.	A	AT	16771.66	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=22.335;DP=817;FS=16.048;HRun=0;HaplotypeScore=157.2199;InbreedingCoeff=0.9988;MQ=73.14;MQ0=0;MQRankSum=-6.248;QD=42.35;ReadPosRankSum=0.578;VQSLOD=2.3952;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,126,1745	1/1:1,10:11:27.09:431,27,0	0/0:29,0:29:81.09:0,81,1082	0/0:34,0:34:65.98:0,66,1239	1/1:4,30:34:87.30:1377,87,0	0/0:32,0:32:93.30:0,93,1285	0/0:31,0:31:90.27:0,90,1223	1/1:3,29:33:96.25:1450,96,0	0/0:31,0:31:90.29:0,90,1241	1/1:1,32:32:96.30:1489,96,0	1/1:1,19:20:54.18:848,54,0	0/0:31,0:31:90.30:0,90,1258	0/0:36,0:36:99:0,105,1451	0/0:31,0:31:90.28:0,90,1213	1/1:3,30:33:78.27:1245,78,0	1/1:2,34:36:99:1582,99,0	0/0:30,0:30:90.30:0,90,1258	1/1:1,20:21:18.32:868,18,0	1/1:2,24:26:72.20:1122,72,0	1/1:1,20:21:54.18:861,54,0	1/1:0,35:35:90.31:1437,90,0	0/0:29,0:29:84.27:0,84,1158	0/0:32,0:32:93.31:0,93,1300	0/0:33,0:33:96.32:0,96,1343	1/1:1,21:22:60.20:957,60,0	1/1:2,24:26:75.21:1139,75,0	1/1:2,30:31:84.29:1342,84,0	1/1:0,13:13:39.13:622,39,0
chr10	45908681	.	ACACCCAGCTCTAACGGG	A	28387.17	PASS	AB=0.540;AC=29;AF=0.518;AN=56;BaseQRankSum=19.533;DP=678;FS=2.602;HRun=0;HaplotypeScore=360.9885;InbreedingCoeff=0.9150;MQ=81.80;MQ0=0;MQRankSum=-16.939;QD=84.49;ReadPosRankSum=0.034;VQSLOD=3.5304;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,129,9904	1/1:0,6:6:12.04:590,12,0	0/0:26,0:26:75.25:0,75,4362	0/0:19,0:19:54.17:0,54,3244	1/1:3,24:27:29.48:1259,29,0	0/0:14,0:14:42.13:0,42,2777	0/0:29,0:29:87.29:0,87,6154	1/1:0,19:19:53.66:1335,54,0	0/0:26,0:26:78.26:0,78,5601	1/1:2,43:45:99:4454,110,0	1/1:0,25:25:54.19:2186,54,0	0/0:22,0:22:63.22:0,63,4738	0/0:26,0:26:75.26:0,75,5471	0/0:20,0:20:57.20:0,57,4447	1/1:1,24:25:39.13:1918,39,0	0/1:4,23:27:99:2742,0,190	0/0:34,0:34:99:0,102,7001	1/1:1,6:7:11.83:319,12,0	1/1:2,18:20:51.02:1693,51,0	1/1:0,31:31:75.26:3055,75,0	1/1:1,17:18:21.07:648,21,0	0/0:32,0:32:90.30:0,90,6438	0/0:24,0:24:72.25:0,72,5021	0/0:26,0:26:78.27:0,78,6110	1/1:2,25:27:54.19:2476,54,0	1/1:1,22:23:60.14:2334,60,0	1/1:1,24:25:57.08:2798,57,0	1/1:1,10:11:12.04:579,12,0
chr10	45908978	.	CT	C	12807.25	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=5.235;DP=621;FS=5.417;HRun=1;HaplotypeScore=101.2013;InbreedingCoeff=0.9999;MQ=83.12;MQ0=0;MQRankSum=-3.946;QD=39.53;ReadPosRankSum=-0.725;VQSLOD=4.5379;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,144,2292	1/1:0,11:11:30.10:420,30,0	0/0:23,0:23:66.20:0,66,1030	0/0:14,0:14:39.13:0,39,606	1/1:0,22:22:48.16:671,48,0	0/0:34,0:34:99:0,99,1571	0/0:20,0:20:60.15:0,60,898	1/1:0,22:22:66.22:923,66,0	0/0:19,0:19:57.18:0,57,878	1/1:0,31:31:90.29:1240,90,0	1/1:0,12:12:36.08:481,36,0	0/0:23,0:23:69.24:0,69,1103	0/0:19,0:19:54.18:0,54,863	0/0:16,0:16:48.16:0,48,768	1/1:0,27:27:78.26:1091,78,0	1/1:0,25:25:72.24:1007,72,0	0/0:15,0:15:45.15:0,45,709	1/1:0,27:27:78.26:1091,78,0	1/1:0,25:25:75.25:1047,75,0	1/1:0,28:28:84.28:1171,84,0	1/1:0,21:21:60.20:839,60,0	0/0:23,0:23:66.21:0,66,1022	0/0:21,0:21:60.19:0,60,936	0/0:21,0:21:63.20:0,63,984	1/1:0,16:16:39.13:545,39,0	1/1:0,17:17:51.15:693,51,0	1/1:0,28:28:78.22:1085,78,0	1/1:0,12:12:36.12:502,36,0
chr10	45909309	.	A	AT	11996.83	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-0.899;DP=602;FS=2.568;HRun=3;HaplotypeScore=73.5976;InbreedingCoeff=0.9998;MQ=90.16;MQ0=0;MQRankSum=-1.953;QD=38.33;ReadPosRankSum=-0.086;VQSLOD=4.9078;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:87.27:0,87,1041	1/1:0,10:10:30.10:420,30,0	0/0:19,0:19:51.15:0,51,612	0/0:27,0:27:69.20:0,69,816	1/1:1,20:21:57.19:797,57,0	0/0:23,0:23:66.18:0,66,779	0/0:20,0:20:54.15:0,54,637	1/1:0,23:23:66.21:907,66,0	0/0:16,0:16:48.15:0,48,576	1/1:0,19:19:57.16:762,57,0	1/1:1,10:11:30.10:417,30,0	0/0:29,0:29:84.26:0,84,1008	0/0:18,0:18:51.13:0,51,588	0/0:19,0:19:54.15:0,54,635	1/1:2,19:21:57.19:798,57,0	1/1:0,20:20:54.18:756,54,0	0/0:29,0:29:87.25:0,87,1030	1/1:2,26:28:42.26:1014,42,0	1/1:1,20:21:60.19:818,60,0	1/1:1,25:26:69.23:961,69,0	1/1:2,29:31:81.27:1134,81,0	0/0:20,0:20:60.18:0,60,720	0/0:18,0:18:54.15:0,54,636	0/0:22,0:21:57.17:0,57,684	1/1:0,14:14:42.14:588,42,0	1/1:2,27:29:81.26:1114,81,0	1/1:2,24:27:72.24:1007,72,0	1/1:0,12:12:36.12:504,36,0
chr10	45910200	.	CTGCCT	C	12849.10	PASS	AB=0.528;AC=29;AF=0.518;AN=56;BaseQRankSum=16.502;DP=617;FS=6.768;HRun=0;HaplotypeScore=131.3303;InbreedingCoeff=0.9115;MQ=85.49;MQ0=0;MQRankSum=-13.022;QD=45.08;ReadPosRankSum=1.096;VQSLOD=4.5922;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,129,3956	1/1:1,6:7:15.01:245,15,0	0/0:27,0:27:69.24:0,69,2058	0/0:23,0:23:57.15:0,57,1535	1/1:4,14:18:30.10:599,30,0	0/0:24,0:24:66.23:0,66,2016	0/0:24,0:24:72.25:0,72,2170	1/1:2,28:30:81.26:1613,81,0	0/0:30,0:30:78.26:0,78,2296	1/1:2,15:16:33.11:684,33,0	1/1:1,10:11:27.05:517,27,0	0/0:21,0:21:63.22:0,63,1936	0/0:25,0:25:69.24:0,69,2093	0/0:17,0:17:45.15:0,45,1383	1/1:3,28:31:72.25:1492,72,0	0/1:2,17:19:41.07:943,0,41	0/0:21,0:21:60.21:0,60,1845	1/1:1,8:9:24.08:497,24,0	1/1:4,13:17:39.61:809,40,0	1/1:3,16:19:45.11:890,45,0	1/1:4,26:30:39.61:809,40,0	0/0:29,0:29:75.20:0,75,2124	0/0:21,0:21:63.13:0,63,1774	0/0:25,0:25:69.24:0,69,2117	1/1:0,19:19:48.16:994,48,0	1/1:4,27:30:78.24:1575,78,0	1/1:5,19:24:51.18:1057,51,0	1/1:0,2:2:6.02:124,6,0
chr10	45910326	.	G	GT	11498.73	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=14.883;DP=690;FS=1.321;HRun=7;HaplotypeScore=99.0952;InbreedingCoeff=0.9992;MQ=79.23;MQ0=0;MQRankSum=-2.188;QD=29.94;ReadPosRankSum=-0.018;VQSLOD=4.4521;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:81.08:0,81,773	1/1:0,9:9:21.06:254,21,0	0/0:22,0:22:54.06:0,54,506	0/0:21,0:21:48.03:0,48,446	1/1:2,23:25:72.18:851,72,0	0/0:16,0:16:36.04:0,36,341	0/0:17,0:17:45.06:0,45,429	1/1:5,36:38:99:1171,99,0	0/0:29,0:29:69.09:0,69,666	1/1:5,36:41:99:1266,105,0	1/1:3,22:25:60.18:725,60,0	0/0:19,0:19:54.08:0,54,520	0/0:27,0:27:75.11:0,75,724	0/0:24,0:24:54.03:0,54,510	1/1:2,29:31:84.22:998,84,0	1/1:2,19:21:28.16:608,28,0	0/0:22,0:22:63.07:0,63,600	1/1:0,13:13:27.08:326,27,0	1/1:3,14:17:42.13:503,42,0	1/1:2,25:27:66.20:797,66,0	1/1:2,36:38:99:1196,99,0	0/0:30,0:30:81.12:0,81,782	0/0:21,0:21:60.10:0,60,579	0/0:21,0:21:51.07:0,51,492	1/1:1,19:20:54.17:652,54,0	1/1:6,30:35:58.22:967,58,0	1/1:5,20:25:60.18:715,60,0	1/1:1,14:15:39.12:471,39,0
chr10	45910429	.	G	GTCTCTGTC	7975.68	PASS	AB=0.951;AC=27;AF=0.482;AN=56;BaseQRankSum=0.473;DP=665;FS=1.537;HRun=0;HaplotypeScore=224.8130;InbreedingCoeff=0.4310;MQ=67.29;MQ0=5;MQRankSum=-9.285;QD=20.56;ReadPosRankSum=-5.257;VQSLOD=3.2500;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:32,0:32:7.11:173,7,0	1/1:9,0:9:15.05:331,15,0	0/0:38,0:25:22.46:0,22,416	0/0:33,0:19:15.62:0,16,231	0/0:35,0:35:32.87:0,33,729	1/1:11,0:11:9.03:177,9,0	0/1:17,0:16:34.68:53,0,35	1/1:29,0:30:48.03:1025,48,0	1/1:16,0:16:24.08:472,24,0	0/0:27,0:26:63.09:0,63,1227	0/0:23,0:23:36.12:0,36,883	0/1:27,0:27:64.48:241,0,64	0/1:20,0:20:13.60:443,0,14	1/1:27,0:27:24.08:471,24,0	0/0:23,0:23:29.98:0,30,585	0/0:21,0:21:30.87:0,31,835	0/0:26,0:25:61.95:0,62,1447	0/0:9,0:9:9.03:0,9,202	1/1:25,2:26:5.18:748,5,0	1/1:16,18:37:13.65:509,14,0	0/0:7,9:19:0:0,0,0	0/1:21,0:21:50.36:162,0,50	0/1:23,0:23:10.63:167,0,11	0/1:21,0:21:47.03:47,0,85	0/0:22,0:22:39.04:0,39,816	0/1:10,7:21:38.65:981,0,39	1/1:10,17:32:33.10:1285,33,0	1/1:4,10:14:18.06:691,18,0
chr10	45910437	.	C	CTCTCTG	5954.84	PASS	AB=0.834;AC=29;AF=0.518;AN=56;BaseQRankSum=0.672;DP=701;FS=0.000;HRun=0;HaplotypeScore=224.0901;InbreedingCoeff=0.5066;MQ=60.46;MQ0=12;MQRankSum=-9.224;QD=14.04;ReadPosRankSum=-0.928;VQSLOD=3.8931;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,29:38:7.37:298,7,0	1/1:9,0:9:5.45:99,5,0	0/0:37,0:19:14.32:0,14,283	0/0:40,0:19:12.28:0,12,99	0/0:31,0:31:32.95:0,33,467	0/1:2,9:12:7.98:288,0,8	1/1:8,13:21:3.01:100,3,0	0/1:34,0:31:71.54:72,0,212	1/1:4,15:21:27.02:818,27,0	0/0:28,0:27:51.93:0,52,699	0/0:26,0:26:35.78:0,36,548	1/1:8,18:26:15.05:469,15,0	1/1:4,19:23:24.08:799,24,0	1/1:2,24:29:24.08:799,24,0	0/0:24,0:24:4.89:0,5,267	0/0:21,0:21:3.41:0,3,392	0/0:25,0:24:65.95:0,66,1273	0/0:8,0:8:8.92:0,9,112	0/1:27,0:24:99:168,0,105	1/1:40,0:40:18.13:324,18,0	0/0:17,0:17:0:0,0,0	1/1:5,19:26:5.64:294,6,0	1/1:6,18:24:11.60:343,12,0	0/1:11,15:28:0.40:18,0,0	0/0:20,0:20:17.47:0,17,396	0/1:22,0:22:84.66:211,0,85	1/1:29,0:28:3.41:482,3,0	1/1:14,0:14:17.65:372,18,0
chr10	45910447	.	CTG	C	728.58	PASS	AB=0.938;AC=10;AF=0.179;AN=56;BaseQRankSum=3.417;DP=678;FS=4.270;HRun=0;HaplotypeScore=222.2360;InbreedingCoeff=0.2030;MQ=54.06;MQ0=16;MQRankSum=-3.146;QD=4.47;ReadPosRankSum=-5.403;VQSLOD=1.7991;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:17.43:0,17,195	1/1:10,0:10:18.15:151,18,0	0/0:34,0:12:23.87:0,24,340	0/0:38,0:16:8.24:0,8,179	0/0:30,1:31:33.20:0,33,586	0/0:15,0:15:15.02:0,15,204	0/0:23,0:22:20.42:0,20,278	0/1:24,9:29:99:307,0,458	0/0:22,0:22:32.91:0,33,411	0/0:28,0:27:62.06:0,62,1045	0/0:26,0:26:37.54:0,38,674	0/0:26,0:26:24.02:0,24,245	0/0:26,0:26:29.41:0,29,378	0/0:27,0:27:24.07:0,24,277	0/0:24,0:24:29.88:0,30,477	0/0:19,0:19:41.23:0,41,713	0/0:25,0:24:72.20:0,72,1301	0/0:7,0:7:14.07:0,14,204	0/1:17,4:18:99:210,0,236	0/1:32,0:32:32.64:33,0,51	1/1:13,0:13:2.21:11,2,0	0/0:28,0:28:26.03:0,26,286	0/0:26,0:26:25.31:0,25,358	0/0:30,0:29:25.24:0,25,345	0/0:22,0:22:39.72:0,40,713	0/1:22,0:22:95.76:96,0,247	0/1:25,0:24:1.90:2,0,188	0/1:7,0:7:59.46:61,0,59
chr10	45910459	.	G	GTC	3205.30	PASS	AB=0.986;AC=31;AF=0.554;AN=56;BaseQRankSum=2.581;DP=669;FS=2.069;HRun=0;HaplotypeScore=227.3934;InbreedingCoeff=0.7433;MQ=48.41;MQ0=22;MQRankSum=-3.175;QD=8.35;ReadPosRankSum=0.150;VQSLOD=3.4226;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:15.88:0,16,174	1/1:5,5:10:9.83:87,10,0	0/0:35,0:11:1.92:0,2,55	0/1:38,0:11:4.08:4,0,28	1/1:19,12:31:17.22:171,17,0	0/0:15,0:15:17.20:0,17,113	0/0:28,0:28:44.52:0,45,520	1/1:32,2:28:44.97:316,45,0	0/0:24,0:24:33.98:0,34,277	1/1:19,7:26:50.58:535,51,0	1/1:19,4:24:12.79:140,13,0	0/1:20,0:20:20.37:20,0,94	0/1:22,1:23:0.97:1,0,245	0/0:23,0:23:16.51:0,17,111	1/1:15,7:22:14.91:142,15,0	1/1:15,6:21:45.02:471,45,0	0/0:26,0:26:72.02:0,72,807	1/1:6,1:7:11.91:90,12,0	1/1:16,0:13:14.82:142,15,0	1/1:31,2:32:5.84:229,6,0	0/0:15,1:16:5.97:0,6,19	0/0:26,0:25:19.91:0,20,204	0/0:25,0:25:23.70:0,24,230	0/0:27,0:26:12.83:0,13,216	1/1:15,7:22:26.63:308,27,0	1/1:17,8:25:36.44:466,36,0	1/1:22,1:22:23.72:238,24,0	1/1:7,0:7:10.55:54,11,0
chr10	45910470	.	T	TCTCA	4088.73	PASS	AB=1.000;AC=28;AF=0.500;AN=56;BaseQRankSum=2.423;DP=672;FS=0.915;HRun=0;HaplotypeScore=243.3093;InbreedingCoeff=0.7742;MQ=43.18;MQ0=29;MQRankSum=-5.921;QD=13.41;ReadPosRankSum=-2.574;VQSLOD=2.9011;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:29.56:0,30,309	1/1:8,0:8:7.57:118,8,0	0/0:42,0:5:8.34:0,8,97	0/0:54,0:10:5.46:0,5,75	1/1:29,0:29:18.61:173,19,0	0/0:17,0:17:15.89:0,16,155	0/0:28,0:28:46.68:0,47,818	1/1:28,0:22:43.73:316,44,0	0/0:22,0:22:28.84:0,29,360	1/1:26,0:25:42.94:584,43,0	1/1:22,0:22:15.54:143,16,0	0/1:20,0:21:59.76:60,0,112	0/0:21,0:20:25.17:0,25,422	0/0:24,0:24:17.70:0,18,143	1/1:20,0:20:15.79:146,16,0	1/1:24,0:24:43.23:526,43,0	0/0:26,0:26:75.05:0,75,1201	1/1:7,0:7:11.44:108,11,0	1/1:11,2:11:19.72:242,20,0	1/1:18,14:31:24.36:472,24,0	0/0:15,6:20:0.14:0,0,1	0/0:24,0:23:32.28:0,32,385	0/0:24,0:24:29.32:0,29,371	0/0:25,0:23:19.30:0,19,384	1/1:21,0:21:27.29:354,27,0	0/1:26,0:26:17.48:414,0,17	1/1:16,5:20:17.22:352,17,0	1/1:6,0:5:9.82:81,10,0
chr10	45910486	.	ACGTTTG	A	1608.37	PASS	AB=0.931;AC=22;AF=0.393;AN=56;BaseQRankSum=5.418;DP=590;FS=1.028;HRun=0;HaplotypeScore=219.6218;InbreedingCoeff=0.3060;MQ=42.84;MQ0=27;MQRankSum=-7.520;QD=5.62;ReadPosRankSum=-0.235;VQSLOD=2.5576;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:34,0:34:4.82:5,0,242	1/1:6,0:8:5.33:63,5,0	0/0:30,0:4:9.01:0,9,107	0/0:37,0:8:9.23:0,9,55	0/1:21,2:24:10.02:48,0,10	0/0:16,0:16:5.23:0,5,164	0/0:28,0:27:52.99:0,53,730	0/1:21,0:14:12.94:149,0,13	0/0:24,0:24:21.20:0,21,695	1/1:15,2:21:20.45:469,20,0	1/1:8,4:12:2.74:13,3,0	0/0:16,0:16:13.65:0,14,240	0/0:24,0:23:44:0,44,775	0/0:22,0:22:30.72:0,31,352	0/1:14,1:15:15.22:64,0,15	1/1:9,8:18:18.92:360,19,0	0/0:25,0:25:72.18:0,72,1432	0/1:7,0:7:17.82:18,0,19	1/1:11,0:8:1.57:107,2,0	0/1:28,0:26:5.03:90,0,5	1/1:23,0:22:18.38:91,18,0	0/0:24,0:23:38.53:0,39,635	0/0:24,0:22:30.69:0,31,595	0/0:26,0:23:22.55:0,23,413	0/1:14,1:17:15.96:18,0,16	0/1:27,0:26:62.13:210,0,62	1/1:17,0:14:7.56:83,8,0	0/0:8,0:3:2.22:0,2,7
chr10	45910490	.	TTGTG	T	937.58	PASS	AB=0.891;AC=29;AF=0.630;AN=46;BaseQRankSum=3.399;DP=539;FS=2.968;HRun=0;HaplotypeScore=188.4159;InbreedingCoeff=0.2565;MQ=43.62;MQ0=25;MQRankSum=-1.171;QD=2.81;ReadPosRankSum=-0.818;VQSLOD=2.6604;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:33,3:35:14.90:195,15,0	1/1:8,0:8:2.99:28,3,0	./.	./.	1/1:20,0:20:1.41:3,1,0	1/1:12,0:16:8.44:53,8,0	1/1:27,0:27:2.56:10,3,0	0/0:14,0:9:2.98:0,3,21	0/1:20,2:25:30.60:60,0,31	1/1:17,0:17:18.05:216,18,0	1/1:9,0:9:2.32:8,2,0	./.	0/1:18,1:23:17.88:18,0,109	1/1:14,3:18:11.66:124,12,0	1/1:11,0:10:3.42:46,3,0	1/1:16,0:16:15.04:169,15,0	0/0:24,0:24:20.81:0,21,411	0/0:8,0:6:3.79:0,4,18	./.	0/1:22,0:20:0.28:0,0,3	1/1:21,0:19:4.05:36,4,0	0/1:22,2:23:46.64:47,0,103	0/0:24,0:22:1.85:0,2,102	0/1:24,0:24:63.16:63,0,87	1/1:12,0:12:0.10:1,0,0	0/0:28,0:27:23.07:0,23,281	0/0:12,0:9:0.47:0,0,1	./.
chr10	45911858	.	A	AAACAACAACAAC	19147.82	PASS	AB=0.900;AC=29;AF=0.518;AN=56;BaseQRankSum=12.419;DP=764;FS=7.480;HRun=0;HaplotypeScore=269.2970;InbreedingCoeff=0.8864;MQ=54.57;MQ0=3;MQRankSum=-10.777;QD=51.33;ReadPosRankSum=-7.274;VQSLOD=1.9398;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,105,2546	1/1:6,0:10:15.77:232,16,0	0/0:15,0:12:16.38:0,16,299	0/0:18,0:14:4.29:0,4,384	1/1:9,16:29:46.07:1570,46,0	0/0:27,0:27:69.18:0,69,2075	0/0:29,0:29:69.03:0,69,1773	1/1:23,0:25:33.51:852,34,0	0/0:31,0:31:78.21:0,78,2338	1/1:8,8:27:40.35:1272,40,0	1/1:15,1:21:35.58:893,36,0	0/0:23,0:23:63.14:0,63,1576	0/0:28,0:28:69.21:0,69,2083	0/0:35,0:35:89.83:0,90,2527	1/1:16,4:30:62.36:2374,62,0	1/1:13,9:28:56.04:2646,56,0	0/0:40,0:40:99:0,99,2613	1/1:5,13:24:6.02:339,6,0	1/1:20,0:24:37.83:701,38,0	1/1:16,0:28:49.88:1785,50,0	1/1:15,0:20:23.78:342,24,0	0/0:35,0:35:90.27:0,90,2720	0/0:33,0:33:81.22:0,81,2482	0/0:36,0:36:19.95:0,20,2787	1/1:6,7:22:12.51:700,13,0	1/1:17,5:33:69.20:2558,69,0	1/1:15,0:32:64.52:2567,65,0	0/1:16,0:18:89.52:319,0,90
chr10	45912910	.	AAGAGAGAGAGAG	A	385.55	PASS	AB=1.000;AC=13;AF=0.283;AN=46;BaseQRankSum=4.051;DP=488;FS=15.788;HRun=0;HaplotypeScore=179.5229;InbreedingCoeff=0.4152;MQ=53.96;MQ0=9;MQRankSum=-3.026;QD=2.64;ReadPosRankSum=-0.220;VQSLOD=1.8828;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:29:19.59:0,20,424	./.	./.	./.	0/0:24,0:25:18.06:0,18,286	0/1:11,0:11:56.39:61,0,56	./.	0/1:22,0:21:0:0,0,0	./.	0/0:16,0:16:16.28:0,16,210	0/0:15,0:16:8.92:0,9,95	0/0:14,0:14:17.93:0,18,318	0/0:14,0:14:7.27:0,7,87	0/1:18,0:17:18.19:26,0,18	0/0:7,0:8:0.83:0,1,20	1/1:17,1:17:9.32:163,9,0	0/0:26,0:23:30.10:0,30,982	0/0:12,0:12:18.06:0,18,311	0/0:18,0:18:1.55:0,2,4	1/1:11,2:13:2.27:78,2,0	1/1:21,0:20:0.86:2,1,0	0/0:22,0:22:9.78:0,10,167	0/0:16,0:15:13.54:0,14,213	0/0:27,0:26:33.40:0,33,458	0/0:11,0:11:3.01:0,3,67	1/1:17,0:16:3.01:84,3,0	1/1:19,6:25:3.79:98,4,0	0/0:18,0:17:0:0,0,0
chr10	45912970	.	AAGG	A	4085.43	PASS	AB=0.545;AC=19;AF=0.339;AN=56;BaseQRankSum=6.285;DP=543;FS=21.064;HRun=0;HaplotypeScore=86.1870;InbreedingCoeff=0.8631;MQ=47.90;MQ0=56;MQRankSum=1.161;QD=22.70;ReadPosRankSum=0.886;VQSLOD=1.9485;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:21:54.11:0,54,996	1/1:1,3:3:9.03:132,9,0	0/0:38,0:7:11.87:0,12,186	0/0:50,0:11:29.48:0,29,419	1/1:4,19:20:13.10:367,13,0	0/0:18,0:17:39.13:0,39,769	0/0:18,0:15:45.15:0,45,889	1/1:11,12:20:30.01:389,30,0	0/0:9,0:9:18.05:0,18,338	0/1:3,15:15:25.21:420,0,25	1/1:5,11:15:21:283,21,0	0/0:15,0:15:42.08:0,42,813	0/0:9,0:8:18.03:0,18,360	0/0:16,0:15:42.14:0,42,846	1/1:4,6:9:18.06:265,18,0	1/1:4,16:18:39.10:551,39,0	0/0:22,1:19:39.08:0,39,687	1/1:5,11:13:15.05:221,15,0	0/0:14,0:12:18.06:0,18,349	0/0:15,0:13:33.11:0,33,627	0/0:21,0:20:28.27:0,28,807	0/0:18,0:17:45.15:0,45,899	0/0:16,0:12:30.10:0,30,592	0/0:25,0:23:48.25:0,48,932	1/1:2,21:22:51.17:729,51,0	1/1:7,20:23:2.23:730,2,0	0/0:11,0:11:26.75:0,27,500	0/0:20,0:18:54.08:0,54,924
chr10	45913064	.	AT	A	180.40	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.459;DP=478;FS=0.000;HRun=2;HaplotypeScore=49.0193;InbreedingCoeff=0.9885;MQ=84.35;MQ0=0;MQRankSum=-0.683;QD=22.55;ReadPosRankSum=0.340;VQSLOD=3.2372;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:39.13:0,39,584	1/1:0,8:8:21.07:273,21,0	0/0:16,0:16:48.16:0,48,705	0/0:17,0:17:51.16:0,51,718	0/0:25,0:25:57.19:0,57,853	0/0:19,0:19:48.15:0,48,699	0/0:12,0:12:33.10:0,33,473	0/0:34,0:34:96.23:0,96,1398	0/0:14,0:14:42.07:0,42,594	0/0:12,0:12:33.11:0,33,494	0/0:16,0:16:42.14:0,42,628	0/0:15,0:14:39.13:0,39,582	0/0:19,0:19:57.19:0,57,836	0/0:15,0:15:45.15:0,45,673	0/0:13,0:13:36.08:0,36,514	0/0:21,0:21:59.96:0,60,844	0/0:15,0:15:45.11:0,45,630	0/0:12,0:12:24.08:0,24,359	0/0:27,0:27:75.24:0,75,1102	0/0:17,0:17:48.15:0,48,701	0/0:11,0:11:30.10:0,30,449	0/0:13,0:13:39.13:0,39,584	0/0:20,0:20:60.20:0,60,899	0/0:18,0:18:51.13:0,51,739	0/0:8,0:8:21.07:0,21,313	0/0:21,0:21:60.20:0,60,898	0/0:25,0:25:75.21:0,75,1094	0/0:22,0:22:63.21:0,63,944
chr10	45913274	.	G	GT	7734.84	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=10.012;DP=519;FS=14.809;HRun=8;HaplotypeScore=151.8541;InbreedingCoeff=0.9673;MQ=67.97;MQ0=4;MQRankSum=-9.997;QD=25.96;ReadPosRankSum=1.523;VQSLOD=3.2665;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:30:50.57:0,51,502	1/1:13,0:13:29.46:119,29,0	0/0:24,0:18:7.44:0,7,253	0/0:20,0:15:24.74:0,25,202	1/1:4,24:27:72.87:793,73,0	0/0:18,0:18:39.01:0,39,357	0/0:12,0:12:29.50:0,30,256	1/1:18,17:35:73.23:775,73,0	0/0:11,0:10:15:0,15,137	1/1:9,14:21:60.14:656,60,0	1/1:3,12:15:39.11:441,39,0	0/0:20,0:19:39.01:0,39,357	0/0:9,0:8:21:0,21,191	0/0:10,0:9:21:0,21,188	1/1:5,20:24:69.19:780,69,0	1/1:0,15:15:45.13:518,45,0	0/0:22,0:22:56.99:0,57,509	1/1:4,4:7:17.64:180,18,0	1/1:13,8:21:39.06:420,39,0	1/1:6,14:19:48.57:530,49,0	1/1:1,2:3:5.98:54,6,0	0/0:13,0:13:26.75:0,27,232	0/0:17,0:16:36.01:0,36,330	0/0:12,0:11:24.01:0,24,220	1/1:3,16:17:48.14:553,48,0	1/1:9,26:31:84.23:950,84,0	1/1:12,16:27:72.16:802,72,0	1/1:6,3:9:15.92:166,16,0
chr10	45913279	.	T	TTG	743.14	PASS	AB=0.984;AC=16;AF=0.286;AN=56;BaseQRankSum=13.930;DP=517;FS=1.310;HRun=0;HaplotypeScore=176.9388;InbreedingCoeff=0.1121;MQ=65.13;MQ0=5;MQRankSum=-11.523;QD=2.90;ReadPosRankSum=7.205;VQSLOD=1.9713;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:75.02:0,75,973	1/1:1,12:13:33.11:586,33,0	0/0:32,0:19:28.78:0,29,525	0/0:19,0:13:33.16:0,33,344	0/1:31,0:27:15.55:58,0,16	0/0:17,0:17:45.06:0,45,623	0/0:13,0:13:33.09:0,33,455	0/1:32,0:30:49.06:49,0,94	0/0:15,0:14:26.80:0,27,303	0/1:22,0:20:0.52:1,0,43	0/1:13,0:13:9.62:21,0,10	0/0:20,0:19:48.03:0,48,642	0/0:9,0:8:24.04:0,24,326	0/0:10,0:9:21.07:0,21,313	0/0:26,0:24:1.77:0,2,75	1/1:15,0:15:11.95:43,12,0	0/0:22,0:21:63.15:0,63,891	0/1:8,0:7:29.73:30,0,41	0/1:13,0:13:0.07:0,0,39	0/1:22,0:21:4.47:4,0,59	1/1:3,0:3:1.41:4,1,0	0/0:13,0:13:35.78:0,36,431	0/0:17,0:16:45.09:0,45,609	0/0:12,0:11:27.05:0,27,378	0/1:19,0:17:17.23:17,0,24	0/1:34,0:30:20.48:72,0,20	0/1:27,1:29:11.59:12,0,54	0/0:7,0:7:1.48:0,1,9
chr10	45913282	.	TGTC	T	4699.54	PASS	AB=0.857;AC=27;AF=0.482;AN=56;BaseQRankSum=7.477;DP=526;FS=6.259;HRun=0;HaplotypeScore=173.0303;InbreedingCoeff=0.8885;MQ=64.18;MQ0=6;MQRankSum=-9.008;QD=16.78;ReadPosRankSum=2.849;VQSLOD=3.8289;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:27:64.26:0,64,1291	0/0:12,0:12:4.01:0,4,13	0/0:33,0:20:53.51:0,54,807	0/0:20,0:13:29.89:0,30,372	1/1:30,2:28:39.05:532,39,0	0/0:17,0:17:45.06:0,45,907	0/0:11,0:11:32.47:0,32,631	0/1:25,2:28:6.05:571,0,6	0/0:16,0:15:21.32:0,21,420	1/1:20,2:20:47.14:495,47,0	1/1:13,1:14:26.04:252,26,0	0/0:22,0:22:48.14:0,48,978	0/0:10,0:8:23.67:0,24,447	0/0:10,0:10:21.07:0,21,434	1/1:25,1:24:54.28:581,54,0	1/1:17,0:16:28.61:162,29,0	0/0:23,0:22:66.14:0,66,1287	1/1:7,1:7:15.91:206,16,0	1/1:12,1:14:39.64:353,40,0	1/1:22,0:21:23.66:324,24,0	1/1:3,0:3:5.98:59,6,0	0/0:12,0:12:30.04:0,30,567	0/0:17,0:16:48.08:0,48,895	0/0:12,0:11:6.86:0,7,494	1/1:18,0:16:28.68:175,29,0	1/1:35,0:31:51.68:387,52,0	1/1:28,3:30:46.66:448,47,0	1/1:5,2:7:12.32:153,12,0
chr10	45913291	.	GT	G	4419.78	PASS	AB=0.955;AC=32;AF=0.571;AN=56;BaseQRankSum=10.901;DP=513;FS=7.886;HRun=4;HaplotypeScore=156.7922;InbreedingCoeff=0.6540;MQ=56.35;MQ0=19;MQRankSum=-7.570;QD=13.08;ReadPosRankSum=1.608;VQSLOD=3.0404;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:30:21.69:22,0,209	1/1:4,10:13:35.52:379,36,0	0/0:37,0:17:7.93:0,8,365	0/0:17,0:10:12.92:0,13,167	1/1:21,9:26:53.76:363,54,0	0/0:9,0:15:24.60:0,25,165	0/0:9,0:9:15.79:0,16,117	1/1:17,14:29:65.60:569,66,0	0/0:11,0:13:21.02:0,21,194	1/1:10,7:15:42.29:331,42,0	1/1:10,3:13:30.13:193,30,0	0/0:22,0:22:0.50:0,1,249	0/1:10,0:8:0.58:1,0,124	0/1:10,0:9:4.03:4,0,95	1/1:18,5:21:44.83:295,45,0	1/1:13,5:17:40.61:250,41,0	0/0:21,0:20:60.19:0,60,810	0/1:7,2:6:28.48:65,0,28	1/1:14,2:13:27.06:193,27,0	1/1:14,9:22:32.14:358,32,0	1/1:1,2:3:3.01:31,3,0	0/0:8,0:9:20.34:0,20,155	0/0:17,0:15:6.36:0,6,162	0/0:12,0:11:5.75:0,6,90	1/1:13,6:17:44.53:297,45,0	1/1:27,5:27:75.53:498,76,0	1/1:25,5:30:57.05:488,57,0	1/1:3,1:4:11.54:83,12,0
chr10	45913292	.	T	TTTG	10936.58	PASS	AB=0.900;AC=29;AF=0.518;AN=56;BaseQRankSum=11.267;DP=516;FS=6.263;HRun=0;HaplotypeScore=151.5895;InbreedingCoeff=0.8936;MQ=54.84;MQ0=21;MQRankSum=-8.792;QD=37.97;ReadPosRankSum=1.759;VQSLOD=5.7895;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:29:67.25:0,67,658	1/1:13,1:13:35.95:544,36,0	0/0:37,0:17:20.98:0,21,468	0/0:16,0:9:21.97:0,22,199	1/1:14,17:27:61.64:1233,62,0	0/0:15,0:15:23.70:0,24,242	0/0:9,0:9:18.90:0,19,191	1/1:22,9:29:76.17:1238,76,0	0/0:14,0:13:23.53:0,24,302	1/1:10,9:17:47.52:897,48,0	1/1:5,8:13:34.69:669,35,0	0/0:22,0:21:28.92:0,29,452	0/0:10,0:8:21.06:0,21,279	0/0:11,0:9:17.07:0,17,182	1/1:13,10:21:51.12:857,51,0	1/1:8,11:18:48.16:981,48,0	0/0:22,0:21:60.68:0,61,1010	0/1:8,1:6:35.01:180,0,35	1/1:15,0:12:27.10:277,27,0	1/1:23,0:22:23.22:406,23,0	1/1:3,0:3:3.01:34,3,0	0/0:9,0:9:20.70:0,21,248	0/0:17,0:15:33.16:0,33,333	0/0:13,0:11:17.80:0,18,202	1/1:7,12:17:47.37:977,47,0	1/1:7,24:27:81.28:1731,81,0	1/1:32,0:30:70.46:782,70,0	1/1:4,0:4:12.02:130,12,0
chr10	45913293	.	T	TTG	4748.41	PASS	AB=1.000;AC=30;AF=0.536;AN=56;BaseQRankSum=13.221;DP=509;FS=4.721;HRun=0;HaplotypeScore=163.7812;InbreedingCoeff=0.8488;MQ=54.29;MQ0=25;MQRankSum=-8.698;QD=16.04;ReadPosRankSum=4.487;VQSLOD=4.3576;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:29:73.91:0,74,669	1/1:14,0:13:19.65:83,20,0	0/0:37,0:17:22.67:0,23,419	0/0:16,0:9:21.11:0,21,213	1/1:31,0:26:56.32:456,56,0	0/1:17,0:17:1.92:2,0,185	0/0:9,0:9:21.84:0,22,204	1/1:29,0:27:16.14:340,16,0	0/0:15,0:14:26.86:0,27,304	1/1:21,0:17:40.13:294,40,0	1/1:12,0:12:31.74:243,32,0	0/0:22,0:21:49.26:0,49,491	0/0:10,0:8:24.01:0,24,277	0/0:11,0:9:17.07:0,17,179	1/1:19,0:17:38.62:315,39,0	1/1:18,0:18:44.21:395,44,0	0/0:22,0:21:63.08:0,63,925	0/1:9,0:6:30.17:79,0,30	1/1:12,1:11:29.18:244,29,0	1/1:18,3:21:30.24:349,30,0	1/1:3,0:3:3:31,3,0	0/0:9,0:8:20.25:0,20,225	0/0:16,0:14:37.01:0,37,341	0/0:13,0:11:17.33:0,17,179	1/1:20,0:17:44.60:351,45,0	1/1:32,0:27:80.19:650,80,0	1/1:23,7:28:63.74:753,64,0	1/1:2,2:4:11.83:163,12,0
chr10	45913294	.	TTG	T	1792.11	PASS	AB=0.989;AC=29;AF=0.518;AN=56;BaseQRankSum=-2.841;DP=499;FS=3.718;HRun=0;HaplotypeScore=163.1275;InbreedingCoeff=-0.1796;MQ=53.06;MQ0=26;MQRankSum=-1.316;QD=4.65;ReadPosRankSum=-6.718;VQSLOD=0.6078;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:32,1:29:37.77:210,0,38	1/1:12,0:11:9.58:23,10,0	0/0:36,0:16:29.25:0,29,306	0/0:16,0:9:17.16:0,17,106	0/1:30,0:25:94.78:121,0,95	0/1:17,0:17:11.99:118,0,12	0/1:8,0:8:12.26:66,0,12	0/1:28,0:26:35.03:35,0,112	0/1:15,0:14:16.55:17,0,60	0/1:21,0:17:46.71:47,0,66	0/1:11,0:11:5.24:5,0,74	0/1:20,2:21:41.58:42,0,86	0/1:10,0:8:19.48:19,0,40	0/1:11,0:9:22.87:23,0,45	0/1:18,0:16:28.29:28,0,88	0/1:18,0:17:5.29:5,0,97	0/0:22,0:21:56.22:0,56,771	0/1:9,0:6:3.91:4,0,71	1/1:9,3:11:27.95:242,28,0	1/1:18,2:19:16.43:221,16,0	1/1:3,0:3:5.90:37,6,0	0/0:9,0:8:12.76:0,13,68	0/1:16,0:14:36:51,0,36	0/1:13,1:11:14.33:111,0,14	0/1:21,0:18:17.13:17,0,95	0/0:31,0:26:18.42:0,18,230	1/1:24,4:28:55:425,55,0	1/1:3,1:4:11.87:100,12,0
chr10	45913313	.	CT	C	3883.97	PASS	AB=0.875;AC=30;AF=0.536;AN=56;BaseQRankSum=6.205;DP=467;FS=1.578;HRun=7;HaplotypeScore=117.4035;InbreedingCoeff=0.8648;MQ=41.01;MQ0=36;MQRankSum=-5.428;QD=14.55;ReadPosRankSum=2.464;VQSLOD=3.0391;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:21:36.11:0,36,445	1/1:4,9:12:24.05:244,24,0	0/0:18,0:6:0.47:0,0,1	0/1:6,0:2:0:0,0,0	1/1:3,28:26:27.05:273,27,0	0/0:12,0:12:30.08:0,30,355	0/0:15,0:13:39.08:0,39,473	1/1:7,17:21:42.09:428,42,0	0/0:17,0:16:23.99:0,24,281	1/1:5,15:16:42.09:427,42,0	1/1:3,9:12:18.03:183,18,0	0/0:19,0:18:37.54:0,38,365	0/0:9,0:8:17.78:0,18,160	0/0:11,0:10:17.85:0,18,156	1/1:3,15:16:27.05:275,27,0	1/1:3,10:12:18.03:181,18,0	0/0:27,0:26:60.16:0,60,726	0/1:6,3:5:8.42:52,0,8	1/1:9,6:12:21:210,21,0	1/1:2,12:14:29.93:305,30,0	1/1:1,4:4:6.01:61,6,0	0/0:15,0:12:27.07:0,27,324	0/0:17,0:14:36.06:0,36,422	0/0:13,0:10:18.01:0,18,197	1/1:5,15:17:27.05:272,27,0	1/1:11,22:28:54.11:547,54,0	1/1:17,10:24:25.26:272,25,0	1/1:1,5:6:15.03:153,15,0
chr10	45913813	.	ATAGATAGATATG	A	1909.80	PASS	AB=0.792;AC=3;AF=0.054;AN=56;BaseQRankSum=5.032;DP=731;FS=7.910;HRun=0;HaplotypeScore=261.8892;InbreedingCoeff=0.6390;MQ=58.64;MQ0=2;MQRankSum=-7.465;QD=36.03;ReadPosRankSum=-2.392;VQSLOD=1.4855;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:69.24:0,69,2577	0/0:10,0:10:21.07:0,21,629	0/0:30,0:19:16.40:0,16,583	0/0:31,0:23:44.80:0,45,1062	0/0:32,0:32:78.24:0,78,2886	0/0:22,0:22:51.17:0,51,2325	0/0:25,0:24:57.20:0,57,2065	1/1:28,6:30:47.87:836,48,0	0/0:29,0:29:72.23:0,72,3136	0/0:45,0:44:99:0,117,4065	0/0:33,0:32:86.25:0,86,3201	0/0:23,0:23:63.22:0,63,2688	0/0:26,0:26:63.22:0,63,2520	0/0:32,0:32:84.29:0,84,3716	0/0:25,0:25:51.17:0,51,1574	0/0:21,0:21:39.98:0,40,1481	0/0:29,0:29:72.72:0,73,3248	0/0:18,0:18:23.98:0,24,754	0/0:13,0:12:33.11:0,33,1020	0/0:28,0:28:68.04:0,68,2843	0/0:19,0:19:26.17:0,26,942	0/0:38,0:38:99:0,111,4729	0/0:34,0:34:90.31:0,90,3931	0/0:23,0:23:47.84:0,48,1914	0/0:17,0:17:45.15:0,45,1668	0/1:14,5:19:37.12:1180,0,37	0/0:30,0:30:72.25:0,72,2594	0/0:17,0:17:39.12:0,39,1063
chr10	45913825	.	G	GTAAA	973.31	PASS	AB=0.895;AC=3;AF=0.054;AN=56;BaseQRankSum=5.877;DP=699;FS=9.761;HRun=0;HaplotypeScore=164.5635;InbreedingCoeff=0.6152;MQ=56.94;MQ0=4;MQRankSum=-6.206;QD=23.74;ReadPosRankSum=-0.545;VQSLOD=2.4693;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:66.15:0,66,1090	0/0:10,0:10:21.04:0,21,329	0/0:27,0:11:8.55:0,9,282	0/0:31,0:21:44.19:0,44,604	0/0:28,0:28:72.23:0,72,1346	0/0:21,0:21:60.21:0,60,1162	0/0:23,0:22:63.18:0,63,1120	1/1:18,5:20:44.41:698,44,0	0/0:27,0:27:78.10:0,78,1355	0/0:43,0:42:99:0,115,1937	0/0:35,0:34:96.67:0,97,1649	0/0:23,0:22:63.16:0,63,1078	0/0:27,0:23:57.14:0,57,971	0/0:28,0:28:84.25:0,84,1527	0/0:24,0:23:51.11:0,51,820	0/0:21,0:20:40.03:0,40,658	0/0:28,0:28:77.86:0,78,1387	0/0:18,0:19:30.03:0,30,446	0/0:18,0:16:20.97:0,21,613	0/0:29,0:28:75.59:0,76,1364	0/0:15,0:15:30.56:0,31,546	0/0:39,0:38:99:0,114,2076	0/0:33,0:33:96.73:0,97,1666	0/0:19,0:19:42.54:0,43,748	0/0:19,0:17:48.16:0,48,929	0/1:15,2:15:58.03:381,0,58	0/0:29,0:29:81.24:0,81,1380	0/0:15,0:15:36.09:0,36,596
chr10	45913844	.	A	AATAG	12725.92	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-7.031;DP=682;FS=3.838;HRun=0;HaplotypeScore=154.0414;InbreedingCoeff=0.9343;MQ=54.06;MQ0=4;MQRankSum=-2.476;QD=37.32;ReadPosRankSum=-0.551;VQSLOD=4.4766;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:35.77:0,36,506	1/1:1,4:4:9.03:208,9,0	0/0:21,0:7:18.01:0,18,259	0/0:27,0:18:6.80:0,7,190	1/1:15,14:29:54.19:1300,54,0	0/0:22,0:22:54.05:0,54,846	0/0:22,0:21:38.92:0,39,616	1/1:9,16:22:36.09:725,36,0	0/0:26,0:26:63.09:0,63,989	1/1:7,29:36:32.12:1934,32,0	1/1:6,22:26:41.46:1066,41,0	0/0:26,0:25:39.10:0,39,631	0/0:28,0:21:38.60:0,39,590	0/0:31,0:30:57.97:0,58,993	1/1:4,18:21:16.70:386,17,0	1/1:6,14:18:24.48:576,24,0	0/0:28,0:28:59.81:0,60,986	1/1:5,13:18:0.20:459,0,0	1/1:15,7:18:27.07:567,27,0	1/1:15,20:33:73.30:1580,73,0	1/1:4,7:12:11.35:285,11,0	0/0:38,0:37:81.26:0,81,1377	0/0:33,0:33:60.66:0,61,1017	0/0:17,0:17:20.33:0,20,341	1/1:9,16:20:16.31:757,16,0	1/1:12,8:18:39.12:832,39,0	1/1:11,15:25:60.16:1399,60,0	1/1:7,6:13:32.14:652,32,0
chr10	45914595	.	GA	G	4626.97	PASS	AB=0.636;AC=47;AF=0.839;AN=56;BaseQRankSum=-0.928;DP=446;FS=18.325;HRun=9;HaplotypeScore=83.7361;InbreedingCoeff=0.5906;MQ=45.75;MQ0=30;MQRankSum=-0.309;QD=14.78;ReadPosRankSum=4.463;VQSLOD=3.5464;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:16,16:28:41.69:385,42,0	1/1:1,4:4:12.01:110,12,0	0/0:47,0:8:15.83:0,16,149	0/0:44,3:9:8.01:0,8,123	1/1:11,9:20:20.55:192,21,0	1/1:2,9:11:21.01:192,21,0	1/1:6,3:9:9.89:84,10,0	1/1:6,8:14:24:225,24,0	1/1:2,11:12:26.94:247,27,0	1/1:5,9:14:29.81:269,30,0	1/1:10,10:18:22.44:216,22,0	1/1:4,4:8:18:165,18,0	1/1:7,4:11:8.93:82,9,0	0/1:5,10:14:0.43:168,0,0	1/1:3,5:7:15.01:137,15,0	1/1:3,7:10:11.58:109,12,0	0/0:37,0:37:71.99:0,72,679	0/1:3,5:8:15.11:70,0,15	1/1:3,11:13:30:274,30,0	1/1:1,14:15:33.02:301,33,0	1/1:0,5:5:9:82,9,0	1/1:1,3:4:9:82,9,0	1/1:1,11:12:11.20:202,11,0	0/1:5,4:9:1.35:22,0,1	1/1:5,8:13:19.97:190,20,0	1/1:2,17:19:51.03:466,51,0	1/1:4,15:17:27:247,27,0	1/1:0,5:5:12.01:109,12,0
chr10	45914608	.	CAA	C	991.19	PASS	AB=0.971;AC=23;AF=0.411;AN=56;BaseQRankSum=2.112;DP=493;FS=31.266;HRun=10;HaplotypeScore=120.1034;InbreedingCoeff=0.1533;MQ=44.40;MQ0=10;MQRankSum=-4.060;QD=4.11;ReadPosRankSum=5.454;VQSLOD=-0.5929;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:28:3.72:31,0,4	0/0:6,0:5:3.99:0,4,20	0/0:45,0:10:7.39:0,7,79	0/0:40,0:9:5.87:0,6,64	0/0:22,0:21:36.75:0,37,223	0/1:19,0:18:8.15:116,0,8	0/1:8,0:8:0.06:19,0,0	0/1:9,8:16:26.16:242,0,26	0/0:17,0:15:7.96:0,8,61	0/1:13,0:13:12.32:12,0,70	0/0:25,0:24:42.83:0,43,233	0/1:10,0:10:0.29:0,0,2	0/1:12,0:12:2.72:3,0,42	1/1:25,0:24:1.04:16,1,0	0/0:8,0:7:0.02:0,0,2	0/0:8,0:8:16.84:0,17,85	0/0:39,0:38:80.33:0,80,988	0/1:10,0:9:2.76:3,0,81	0/1:13,0:12:11.25:36,0,11	1/1:14,0:14:4.94:110,5,0	1/1:6,0:6:5.93:41,6,0	1/1:5,0:5:3.02:8,3,0	0/1:14,0:14:4.30:4,0,54	0/0:10,0:12:2.99:0,3,9	0/0:28,0:27:4:0,4,202	1/1:12,11:23:30.33:424,30,0	0/1:15,0:13:26.09:58,0,26	1/1:4,0:4:5.35:22,5,0
chr10	45914615	.	AAAAC	A	1764.56	PASS	AB=1.000;AC=37;AF=0.661;AN=56;BaseQRankSum=3.058;DP=491;FS=0.458;HRun=0;HaplotypeScore=134.0771;InbreedingCoeff=0.3630;MQ=44.20;MQ0=13;MQRankSum=-3.913;QD=5.62;ReadPosRankSum=-1.322;VQSLOD=2.5679;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:31,0:27:47.44:253,47,0	1/1:7,0:6:16.67:95,17,0	0/0:44,0:10:6.44:0,6,53	0/0:40,0:9:7.54:0,8,59	0/1:21,0:20:29.61:30,0,142	0/1:18,0:17:25.51:99,0,26	1/1:7,0:7:10:35,10,0	0/0:24,0:23:51.95:0,52,408	1/1:15,0:13:13.39:52,13,0	0/1:11,0:11:12:12,0,54	0/1:26,0:25:8.61:9,0,112	1/1:10,0:10:7.66:35,8,0	0/1:11,0:11:2.24:32,0,2	1/1:25,0:23:21.44:136,21,0	1/1:8,0:7:0.92:31,1,0	0/0:9,0:9:10.22:0,10,63	0/0:36,0:35:84.48:0,84,1273	0/1:12,0:11:28.69:29,0,62	1/1:9,0:8:9.02:56,9,0	1/1:13,2:15:32.18:258,32,0	1/1:11,0:10:20.13:127,20,0	1/1:3,0:3:8.43:39,8,0	1/1:15,0:14:23.73:118,24,0	1/1:11,0:11:12.37:56,12,0	0/1:27,0:26:76.23:76,0,102	0/0:24,0:23:34.21:0,34,231	1/1:19,0:17:38.15:289,38,0	1/1:0,2:2:6.02:85,6,0
chr10	45914616	.	AAAC	A	3932.24	PASS	AB=1.000;AC=41;AF=0.732;AN=56;BaseQRankSum=1.033;DP=486;FS=0.483;HRun=0;HaplotypeScore=119.5357;InbreedingCoeff=0.5650;MQ=43.99;MQ0=12;MQRankSum=-3.126;QD=12.56;ReadPosRankSum=-1.154;VQSLOD=3.3185;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:21,9:26:58.74:673,59,0	1/1:7,0:6:17.10:105,17,0	0/0:44,0:10:5.64:0,6,56	0/0:41,0:9:8.39:0,8,73	0/1:22,0:21:39.72:104,0,40	1/1:18,0:17:18.16:217,18,0	1/1:5,2:7:14.11:121,14,0	0/0:23,0:22:40.11:0,40,270	1/1:7,6:11:20.88:224,21,0	0/1:10,0:10:6.47:38,0,6	1/1:26,0:25:3.36:67,3,0	1/1:9,1:10:14.41:108,14,0	1/1:9,2:11:13.51:73,14,0	1/1:18,6:22:24.34:300,24,0	1/1:7,0:6:5.38:54,5,0	0/0:8,1:9:3.30:0,3,9	0/0:35,0:34:74.48:0,74,1020	0/1:13,0:12:4.87:45,0,5	1/1:9,0:8:16.99:123,17,0	1/1:13,2:15:32.96:345,33,0	1/1:12,0:11:23.85:204,24,0	1/1:1,2:3:9.03:130,9,0	1/1:7,9:15:26.75:335,27,0	1/1:10,1:11:17.50:89,17,0	1/1:27,0:26:1.94:136,2,0	0/0:21,0:20:7.81:0,8,85	1/1:16,4:19:41.89:387,42,0	1/1:2,0:2:6:54,6,0
chr10	45914617	.	AAC	A	4785.59	PASS	AB=1.000;AC=49;AF=0.875;AN=56;BaseQRankSum=4.240;DP=485;FS=0.566;HRun=0;HaplotypeScore=110.1962;InbreedingCoeff=0.6950;MQ=44.14;MQ0=12;MQRankSum=-2.634;QD=13.04;ReadPosRankSum=0.157;VQSLOD=4.4804;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:28,2:26:59.44:443,59,0	1/1:7,0:6:16.59:109,17,0	0/0:43,0:9:9.89:0,10,72	0/0:40,0:8:5.93:0,6,66	1/1:21,1:21:12.38:193,12,0	1/1:15,3:17:42.48:460,42,0	1/1:6,1:7:17.67:135,18,0	0/1:23,0:22:94.99:97,0,95	1/1:13,0:11:19.98:128,20,0	1/1:8,1:9:17.89:162,18,0	1/1:27,0:26:43.19:261,43,0	1/1:10,0:10:14.65:94,15,0	1/1:11,0:11:15.38:100,15,0	1/1:21,3:22:29.58:226,30,0	1/1:6,1:6:11.62:79,12,0	1/1:9,0:9:13.85:64,14,0	0/0:35,0:34:67.29:0,67,763	1/1:10,3:12:16.15:116,16,0	1/1:8,2:9:20.96:205,21,0	1/1:11,5:16:35.84:342,36,0	1/1:10,2:11:23.85:207,24,0	1/1:3,0:3:8.95:66,9,0	1/1:15,0:14:26.36:190,26,0	1/1:11,0:11:19.87:106,20,0	1/1:26,1:26:44.93:378,45,0	1/1:21,0:20:26.92:205,27,0	1/1:16,4:18:44.63:379,45,0	1/1:2,0:2:5.91:38,6,0
chr10	45914618	.	AC	A	5313.94	PASS	AB=1.000;AC=47;AF=0.839;AN=56;BaseQRankSum=3.039;DP=471;FS=22.670;HRun=1;HaplotypeScore=100.3313;InbreedingCoeff=0.7386;MQ=44.43;MQ0=12;MQRankSum=-2.303;QD=16.20;ReadPosRankSum=0.916;VQSLOD=3.7357;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:28,1:25:57.86:412,58,0	1/1:5,0:6:17.78:126,18,0	0/0:44,0:10:7.40:0,7,55	0/0:38,2:8:4.82:0,5,43	1/1:18,4:21:38.66:425,39,0	1/1:16,1:16:40.45:323,40,0	1/1:6,1:7:16.26:88,16,0	0/0:23,0:22:11.97:0,12,151	1/1:11,0:9:19.72:150,20,0	1/1:5,4:9:25.17:246,25,0	1/1:15,11:25:61.08:583,61,0	1/1:9,1:10:14.72:116,15,0	1/1:9,0:9:16.68:101,17,0	1/1:23,1:22:29.56:221,30,0	1/1:7,0:6:9.24:91,9,0	1/1:4,4:8:15.04:184,15,0	0/0:36,0:35:32.89:0,33,460	1/1:11,1:11:16.41:153,16,0	1/1:8,2:9:22.75:195,23,0	1/1:15,0:15:35.14:225,35,0	1/1:11,0:10:23.76:167,24,0	1/1:2,1:3:8.97:81,9,0	1/1:12,0:11:23.06:236,23,0	1/1:9,2:11:19.78:108,20,0	1/1:17,9:25:68.01:699,68,0	0/1:20,0:19:26.76:27,0,36	1/1:18,0:16:44.15:305,44,0	1/1:4,0:4:8.59:51,9,0
chr10	45914621	.	AAAC	A	2181.97	PASS	AB=0.973;AC=38;AF=0.679;AN=56;BaseQRankSum=1.735;DP=489;FS=0.000;HRun=0;HaplotypeScore=125.5271;InbreedingCoeff=0.3490;MQ=45.90;MQ0=12;MQRankSum=-2.763;QD=7.04;ReadPosRankSum=-2.624;VQSLOD=2.5747;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:25,3:24:39.01:356,39,0	1/1:7,0:6:16.94:103,17,0	0/0:46,0:10:6.47:0,6,42	0/0:42,0:10:9.81:0,10,52	0/1:22,0:21:99:120,0,114	0/1:18,0:17:52.50:53,0,92	1/1:7,0:7:1.29:19,1,0	0/0:25,0:24:35.35:0,35,357	1/1:11,0:9:18:98,18,0	0/1:9,1:10:18.91:88,0,19	0/1:25,1:25:49.38:49,0,98	1/1:10,1:11:12.32:132,12,0	1/1:9,1:10:13.91:165,14,0	1/1:24,0:22:29.14:194,29,0	1/1:7,0:6:4.83:51,5,0	0/0:7,0:7:9.61:0,10,51	0/0:37,0:36:56.58:0,57,705	0/1:12,0:11:29.57:46,0,30	1/1:12,0:11:7.06:45,7,0	1/1:14,0:14:23.96:119,24,0	1/1:12,0:11:2.91:48,3,0	1/1:4,0:4:11.88:84,12,0	1/1:12,1:12:29.20:229,29,0	1/1:12,0:12:16.42:116,16,0	0/1:25,1:25:60.23:60,0,112	0/0:22,0:21:4.69:0,5,234	1/1:19,0:17:22.71:139,23,0	1/1:5,0:5:8:50,8,0
chr10	45914622	.	AAC	A	2347.80	PASS	AB=0.994;AC=43;AF=0.768;AN=56;BaseQRankSum=2.351;DP=494;FS=2.807;HRun=0;HaplotypeScore=119.4700;InbreedingCoeff=0.1798;MQ=46.10;MQ0=11;MQRankSum=-2.781;QD=6.35;ReadPosRankSum=-1.398;VQSLOD=2.8389;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:28,1:25:44.52:310,45,0	1/1:7,0:6:16.81:110,17,0	0/0:44,1:10:6.66:0,7,52	0/0:41,0:10:0.05:0,0,37	0/1:22,1:21:51.76:159,0,52	0/1:18,0:17:56.45:83,0,56	1/1:7,0:7:8.16:46,8,0	0/1:25,0:24:3.31:3,0,251	1/1:11,0:9:17.08:90,17,0	1/1:11,0:11:3.98:97,4,0	0/1:26,0:25:10.90:71,0,11	1/1:12,0:12:17.74:135,18,0	1/1:10,0:10:19.58:143,20,0	1/1:24,0:22:29.49:217,29,0	1/1:9,0:8:12.02:104,12,0	0/1:8,0:8:13.07:17,0,13	0/0:36,1:36:16.81:0,17,427	1/1:11,0:11:3.93:57,4,0	1/1:12,0:11:6.72:50,7,0	1/1:14,0:14:23.23:93,23,0	1/1:12,0:11:7.71:48,8,0	1/1:4,0:4:11.51:67,12,0	1/1:13,0:12:28.82:190,29,0	1/1:11,1:12:19.94:141,20,0	0/1:26,0:25:40.86:96,0,41	0/1:22,0:21:15.48:15,0,187	1/1:19,0:17:27.94:122,28,0	1/1:5,0:5:8.30:41,8,0
chr10	45914623	.	AC	A	2972.52	PASS	AB=0.974;AC=48;AF=0.857;AN=56;BaseQRankSum=2.651;DP=493;FS=13.562;HRun=1;HaplotypeScore=111.6694;InbreedingCoeff=0.1021;MQ=46.17;MQ0=11;MQRankSum=-1.777;QD=6.65;ReadPosRankSum=1.975;VQSLOD=-0.5146;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:24:46:310,46,0	1/1:7,0:6:17.80:125,18,0	0/0:45,0:10:0.20:0,0,30	0/1:36,3:10:0.07:0,0,40	0/1:22,1:21:10.92:210,0,11	0/1:18,0:17:65.64:66,0,67	1/1:7,0:7:2.36:34,2,0	0/1:26,0:25:41.86:42,0,192	1/1:12,0:10:19.22:129,19,0	1/1:11,0:11:20.76:142,21,0	1/1:25,1:25:38.14:205,38,0	1/1:11,1:12:16.56:144,17,0	1/1:9,1:10:20.73:157,21,0	1/1:23,0:21:29.28:206,29,0	1/1:9,0:8:11.44:88,11,0	1/1:7,1:8:12.83:67,13,0	0/1:37,0:36:53.75:54,0,213	1/1:11,0:11:16.65:104,17,0	1/1:12,0:11:6.14:57,6,0	1/1:14,0:14:20.24:64,20,0	1/1:12,0:11:13.46:52,13,0	1/1:4,0:4:11.76:92,12,0	1/1:13,0:12:23.28:250,23,0	1/1:12,0:12:20.39:142,20,0	1/1:26,0:25:33.64:234,34,0	0/1:21,1:21:8.70:9,0,149	1/1:19,0:17:23.29:92,23,0	1/1:5,0:5:7.97:34,8,0
chr10	45914624	.	C	CA	1137.40	PASS	AB=0.954;AC=37;AF=0.661;AN=56;BaseQRankSum=-0.208;DP=502;FS=1.221;HRun=16;HaplotypeScore=120.9049;InbreedingCoeff=0.2802;MQ=46.54;MQ0=11;MQRankSum=-1.880;QD=2.75;ReadPosRankSum=0.555;VQSLOD=0.4581;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:24:28.52:104,29,0	1/1:7,0:6:2.84:14,3,0	0/1:47,0:10:2.94:3,0,3	0/0:36,0:8:3.91:0,4,18	0/1:22,3:23:25.58:82,0,26	0/1:16,2:18:25.13:25,0,83	0/1:7,0:7:2.44:2,0,11	1/1:27,2:28:1.99:105,2,0	1/1:12,0:10:11.22:39,11,0	1/1:11,0:11:14.32:91,14,0	0/1:23,3:25:6.27:121,0,6	1/1:13,0:13:8.25:26,8,0	1/1:11,0:11:0.81:9,1,0	1/1:23,1:22:13.82:66,14,0	1/1:8,1:8:11.35:95,11,0	1/1:8,0:8:7.01:42,7,0	0/1:35,1:36:50.26:50,0,91	1/1:9,2:11:18.74:100,19,0	0/1:12,0:11:2.28:2,0,18	0/0:10,0:14:16:0,16,63	0/0:12,0:11:8.05:0,8,39	1/1:4,0:4:8.67:29,9,0	1/1:14,0:13:12.61:44,13,0	0/1:12,0:12:1.51:2,0,2	1/1:20,6:25:16.31:177,16,0	0/1:20,2:21:3.91:71,0,4	0/0:16,0:18:7.97:0,8,99	0/0:3,0:5:6.28:0,6,22
chr10	45914635	.	A	AAC	1255.83	PASS	AB=0.816;AC=15;AF=0.268;AN=56;BaseQRankSum=1.454;DP=485;FS=7.917;HRun=0;HaplotypeScore=117.8937;InbreedingCoeff=0.6586;MQ=51.81;MQ0=9;MQRankSum=-3.325;QD=9.44;ReadPosRankSum=2.527;VQSLOD=3.0418;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,7:24:21.67:406,22,0	0/0:6,0:5:7.42:0,7,42	0/0:36,0:13:13.89:0,14,130	0/0:31,0:7:4.75:0,5,23	0/0:25,0:24:67.29:0,67,517	0/0:20,0:19:46.77:0,47,480	0/0:7,0:7:14.42:0,14,113	0/0:30,0:29:74.68:0,75,539	1/1:8,2:8:8.68:148,9,0	0/0:9,0:9:13.24:0,13,100	0/0:24,0:23:53.10:0,53,372	1/1:5,11:16:2.56:124,3,0	1/1:10,0:10:18.94:165,19,0	0/1:7,16:23:14.90:42,0,15	0/0:11,0:10:8.84:0,9,76	0/0:9,0:9:21.84:0,22,165	0/0:38,0:36:83.39:0,83,815	0/0:12,0:12:21.14:0,21,173	0/0:13,0:12:10.54:0,11,147	0/0:14,0:14:34.60:0,35,284	0/1:11,0:10:13.40:13,0,111	1/1:3,3:6:16.56:164,17,0	1/1:6,8:13:14.03:267,14,0	0/1:11,1:13:1.70:107,0,2	0/0:26,0:25:57.18:0,57,436	0/0:18,0:17:37.34:0,37,301	0/0:17,0:16:49.59:0,50,430	0/0:6,0:6:14.83:0,15,103
chr10	45914835	.	GGTTT	G	3951.72	PASS	AB=0.835;AC=15;AF=0.268;AN=56;BaseQRankSum=12.201;DP=538;FS=3.502;HRun=0;HaplotypeScore=87.4479;InbreedingCoeff=0.6953;MQ=62.53;MQ0=1;MQRankSum=0.542;QD=21.59;ReadPosRankSum=0.748;VQSLOD=3.4596;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:60.21:0,60,1442	0/0:8,0:8:15.04:0,15,308	0/0:24,0:19:17.75:0,18,280	0/0:10,0:9:12.51:0,13,289	0/0:20,0:20:39.10:0,39,893	0/0:17,0:17:45.10:0,45,967	0/1:16,1:17:12.52:13,0,763	1/1:17,8:25:23.54:359,24,0	0/0:12,0:11:24.08:0,24,581	0/0:20,0:20:45.15:0,45,1074	0/0:26,0:26:51.18:0,51,1232	0/0:14,0:14:33.11:0,33,796	0/0:17,0:17:39.13:0,39,945	0/0:25,0:25:54.14:0,54,1223	0/0:21,0:21:54.15:0,54,1236	0/0:14,0:14:36.09:0,36,820	0/1:17,1:18:9.51:10,0,803	0/0:17,0:17:45.15:0,45,1057	1/1:12,10:21:30.06:436,30,0	1/1:2,16:18:45.07:672,45,0	1/1:4,5:9:12.04:195,12,0	0/0:16,0:16:39.13:0,39,945	0/0:20,2:22:5.54:0,6,1139	0/0:20,0:20:54.19:0,54,1294	0/0:24,0:24:48.16:0,48,1116	0/1:10,17:27:99:760,0,158	1/1:9,33:42:84.29:1362,84,0	1/1:2,3:5:9.03:146,9,0
chr10	45915664	.	T	TTA	1583.15	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-3.837;DP=507;FS=9.103;HRun=0;HaplotypeScore=68.6849;InbreedingCoeff=0.9395;MQ=71.22;MQ0=6;MQRankSum=0.750;QD=15.99;ReadPosRankSum=3.297;VQSLOD=2.9504;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,105,907	0/0:5,0:5:8.78:0,9,67	0/0:32,0:11:17.38:0,17,184	0/0:27,0:15:25.16:0,25,142	0/0:19,0:19:47.52:0,48,431	0/0:20,0:20:50.40:0,50,439	0/0:12,0:12:35.46:0,35,311	0/0:29,0:29:63.22:0,63,530	0/0:14,0:14:37.46:0,37,326	0/0:21,0:21:59.28:0,59,527	0/0:18,0:18:40.41:0,40,358	0/0:14,0:14:39.68:0,40,342	0/0:14,0:14:35.68:0,36,316	0/0:7,0:7:11.57:0,12,96	0/0:11,0:11:23.77:0,24,198	0/0:15,0:15:41.47:0,41,374	0/0:22,0:22:59.78:0,60,546	0/0:9,0:9:14.95:0,15,119	1/1:4,7:27:72.52:736,73,0	1/1:3,12:22:25.36:348,25,0	1/1:1,10:14:13.86:195,14,0	0/0:14,0:14:17.93:0,18,254	0/0:21,0:21:43.38:0,43,404	0/0:16,0:16:43.20:0,43,380	0/0:10,0:10:8.54:0,9,225	0/0:13,0:13:34.96:0,35,280	1/1:4,3:21:10.72:213,11,0	1/1:2,11:15:20.96:262,21,0
chr10	45916879	.	CA	C	2174.88	PASS	AB=0.733;AC=31;AF=0.554;AN=56;BaseQRankSum=1.799;DP=525;FS=13.385;HRun=14;HaplotypeScore=63.2548;InbreedingCoeff=0.7486;MQ=59.04;MQ0=3;MQRankSum=-1.076;QD=6.61;ReadPosRankSum=4.440;VQSLOD=1.0026;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:12,27:38:29.22:431,29,0	1/1:0,0:7:12.22:36,12,0	0/0:18,0:8:9.22:0,9,59	0/0:13,1:8:5.99:0,6,50	0/0:5,0:18:30.28:0,30,180	0/0:2,0:11:20.04:0,20,111	0/0:5,0:21:17.36:0,17,109	1/1:10,10:22:33.45:216,33,0	1/1:6,22:30:52.44:352,52,0	0/0:9,0:17:29.37:0,29,207	0/0:3,0:14:32.18:0,32,184	1/1:7,10:17:17.66:123,18,0	0/1:7,7:15:0.74:89,0,1	1/1:8,10:18:13.06:87,13,0	0/0:2,0:14:7.24:0,7,32	0/0:6,0:16:28.85:0,29,165	0/0:26,3:30:27.73:0,28,516	0/0:2,0:22:5.82:0,6,37	1/1:3,0:10:14.25:42,14,0	1/1:7,0:23:15.66:63,16,0	1/1:2,0:12:10.62:30,11,0	1/1:4,10:15:25.82:170,26,0	1/1:4,14:21:35.85:223,36,0	1/1:5,17:23:37.69:253,38,0	0/1:5,1:16:5.90:6,0,66	0/1:7,11:20:12.96:174,0,13	1/1:3,0:21:24.43:72,24,0	1/1:4,0:8:6.08:18,6,0
chr10	45917064	.	AG	A	4449.42	PASS	AB=0.955;AC=54;AF=0.964;AN=56;BaseQRankSum=-3.857;DP=236;FS=10.869;HRun=7;HaplotypeScore=37.7584;InbreedingCoeff=-0.0767;MQ=75.61;MQ0=3;MQRankSum=-2.519;QD=18.85;ReadPosRankSum=0.525;VQSLOD=3.1175;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,10:16:27.06:275,27,0	1/1:0,4:4:9.02:92,9,0	1/1:5,6:7:9.69:87,10,0	0/1:9,1:8:21.86:79,0,22	1/1:1,3:4:9.02:90,9,0	1/1:1,3:4:3.01:31,3,0	1/1:0,7:7:12.03:122,12,0	1/1:4,7:10:18.04:183,18,0	1/1:8,8:16:9.61:274,10,0	1/1:1,9:10:27.03:264,27,0	1/1:1,7:8:21.05:214,21,0	1/1:0,4:4:9.02:92,9,0	1/1:2,2:4:7.56:59,8,0	1/1:3,5:8:15.03:151,15,0	1/1:3,5:8:20.93:193,21,0	1/1:2,3:5:6.77:73,7,0	1/1:4,10:11:23.53:226,24,0	0/1:3,0:3:8.73:48,0,9	1/1:2,7:9:20.98:204,21,0	1/1:1,13:14:41.93:411,42,0	1/1:2,18:19:41.78:427,42,0	1/1:0,8:8:15.03:153,15,0	1/1:0,4:4:12.03:122,12,0	1/1:2,2:4:3.47:31,3,0	1/1:3,2:5:6.01:61,6,0	1/1:4,6:10:18.51:184,19,0	1/1:4,9:13:23.75:242,24,0	1/1:0,2:2:6.01:61,6,0
chr10	45918424	.	ACAGCAGCAG	A	650.56	PASS	AB=0.938;AC=11;AF=0.688;AN=16;BaseQRankSum=0.283;DP=529;FS=6.569;HRun=0;HaplotypeScore=145.2194;MQ=72.90;MQ0=11;MQRankSum=-1.517;QD=3.70;ReadPosRankSum=-0.129;VQSLOD=1.8997;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	./.	./.	0/0:63,0:56:2.99:0,3,23	./.	1/1:21,5:26:9.50:239,10,0	./.	./.	./.	1/1:15,1:16:2.98:79,3,0	1/1:31,2:33:3.01:79,3,0	0/1:28,0:29:0.89:1,0,85	./.	0/0:44,0:41:24.55:0,25,920	1/1:19,1:25:4.26:82,4,0	./.	./.	./.	./.	./.	1/1:46,0:46:11.69:261,12,0	./.	./.	./.	./.
chr10	45919005	.	G	GA	1130.53	PASS	AB=0.918;AC=31;AF=0.554;AN=56;BaseQRankSum=0.859;DP=443;FS=7.891;HRun=15;HaplotypeScore=70.5223;InbreedingCoeff=0.2611;MQ=43.32;MQ0=35;MQRankSum=-2.913;QD=3.51;ReadPosRankSum=-2.176;VQSLOD=-0.2207;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:20:6.90:0,7,67	1/1:3,0:3:2.98:21,3,0	0/0:37,0:8:8.65:0,9,54	0/1:39,0:6:5.18:5,0,7	1/1:3,2:6:1.32:55,1,0	1/1:5,14:18:5.59:157,6,0	0/1:2,5:7:9.42:26,0,9	0/1:16,0:19:8.16:8,0,11	0/0:8,0:11:6.04:0,6,19	0/1:13,4:15:5.82:126,0,6	1/1:6,3:8:12.18:89,12,0	0/0:8,0:11:9.90:0,10,29	0/0:6,0:7:11:0,11,34	0/0:8,0:11:14.88:0,15,43	1/1:14,1:15:7.53:50,8,0	0/1:5,0:4:17.19:38,0,17	0/1:26,2:27:26.82:27,0,165	0/1:27,1:24:55.02:132,0,55	1/1:17,3:15:18.07:112,18,0	1/1:14,2:14:7.75:108,8,0	1/1:5,0:4:0.47:1,0,0	0/0:3,0:6:5.89:0,6,16	0/0:9,0:11:8.67:0,9,29	0/1:9,0:16:5.57:11,0,6	1/1:5,3:7:15.30:110,15,0	0/1:13,0:15:1.30:28,0,1	1/1:19,0:18:14.91:97,15,0	1/1:15,3:16:12.99:101,13,0
chr10	45919026	.	GA	G	1040.09	PASS	AB=0.939;AC=15;AF=0.268;AN=56;BaseQRankSum=-1.033;DP=503;FS=16.739;HRun=11;HaplotypeScore=80.9483;InbreedingCoeff=0.6687;MQ=52.80;MQ0=27;MQRankSum=-1.270;QD=6.12;ReadPosRankSum=-0.822;VQSLOD=0.3688;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:26:59.43:0,59,613	0/0:3,0:3:0.10:0,0,8	0/1:62,0:17:4.07:4,0,108	0/0:51,2:14:18.38:0,18,111	1/1:8,2:9:20.38:140,20,0	0/0:23,0:22:22.46:0,22,216	0/1:8,0:8:6.23:6,0,111	0/0:28,0:27:55.76:0,56,550	0/0:12,0:10:11.53:0,12,147	1/1:11,10:19:44.14:345,44,0	1/1:6,5:9:12.01:101,12,0	0/0:14,0:14:32.80:0,33,316	0/0:6,0:6:7.45:0,7,93	0/0:12,0:11:22.77:0,23,225	1/1:10,6:16:23.93:191,24,0	0/1:4,1:5:14.09:14,0,24	0/0:24,0:22:53.87:0,54,552	1/1:15,10:20:31.55:294,32,0	0/0:26,0:21:26.57:0,27,191	0/0:10,0:18:24.11:0,24,146	0/0:3,0:3:1.11:0,1,9	0/0:7,0:7:18.04:0,18,187	0/0:9,0:9:27.06:0,27,282	0/0:20,0:17:15.04:0,15,160	1/1:6,3:8:17.15:129,17,0	0/0:16,0:16:28.87:0,29,313	0/0:18,0:18:16.95:0,17,153	0/0:10,0:12:26.50:0,26,181
chr10	45919192	.	G	GA	866.15	PASS	AB=0.692;AC=11;AF=0.196;AN=56;BaseQRankSum=-6.239;DP=453;FS=0.594;HRun=14;HaplotypeScore=57.2800;InbreedingCoeff=0.2959;MQ=65.78;MQ0=5;MQRankSum=0.506;QD=6.28;ReadPosRankSum=0.451;VQSLOD=2.0953;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:27:45.28:0,45,253	0/0:1,0:9:14.03:0,14,40	0/0:25,0:10:13.57:0,14,83	0/0:21,0:10:10.97:0,11,57	0/1:5,6:11:1.30:107,0,1	0/0:15,0:18:29.68:0,30,170	0/0:3,0:4:10.87:0,11,61	0/0:10,0:31:35.50:0,36,106	0/0:11,0:12:28.52:0,29,172	1/1:11,10:21:26.86:219,27,0	0/1:10,12:22:11.07:158,0,11	0/0:14,0:15:2.40:0,2,124	0/0:11,0:11:19.55:0,20,114	0/1:11,0:14:4.17:4,0,84	0/1:5,15:20:4.18:126,0,4	1/1:1,7:9:14.84:120,15,0	0/0:19,0:27:53.41:0,53,294	0/1:5,10:17:18.62:113,0,19	0/0:9,0:9:7.78:0,8,44	0/0:18,0:21:45.23:0,45,272	0/0:6,0:6:11.74:0,12,76	0/0:6,0:6:14.75:0,15,95	0/0:12,0:13:13.73:0,14,81	0/1:2,1:4:15.41:15,0,33	0/1:5,15:20:10.65:159,0,11	0/0:8,0:22:29.69:0,30,97	0/0:17,0:19:27.47:0,27,164	0/0:13,1:16:10.20:0,10,175
chr10	45919668	.	AT	A	2387.08	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=10.678;DP=425;FS=0.435;HRun=10;HaplotypeScore=46.9579;InbreedingCoeff=0.9227;MQ=68.25;MQ0=4;MQRankSum=1.030;QD=18.08;ReadPosRankSum=-0.568;VQSLOD=3.6296;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:48.10:0,48,511	0/0:9,0:9:24.06:0,24,265	0/0:26,0:10:2.93:0,3,100	0/0:20,0:7:8.88:0,9,72	0/0:19,0:21:53.97:0,54,570	0/0:16,0:16:42.09:0,42,455	0/0:8,0:8:24.05:0,24,256	1/1:6,24:30:71.94:617,72,0	0/0:10,0:10:12.01:0,12,123	0/0:13,0:13:33.09:0,33,365	0/0:22,0:23:68.99:0,69,722	0/0:7,0:7:15.03:0,15,157	0/0:7,0:7:18.02:0,18,188	0/0:8,0:8:18.04:0,18,192	0/0:11,0:11:33.07:0,33,351	0/0:11,0:11:27.07:0,27,299	0/0:19,0:19:48.07:0,48,497	0/0:18,0:18:45.11:0,45,488	1/1:7,14:17:41.94:355,42,0	1/1:1,18:19:47.91:407,48,0	1/1:2,4:6:11.98:104,12,0	0/0:10,0:10:21.06:0,21,232	0/0:11,0:11:30.07:0,30,324	0/0:4,0:4:12.01:0,12,123	0/0:22,0:22:54.08:0,54,566	1/1:4,11:15:9.97:260,10,0	1/1:3,16:19:15.50:289,15,0	1/1:1,21:22:62.99:547,63,0
chr10	45921442	.	GAAAGAAAGAA	G	271.14	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.521;DP=445;FS=1.129;HRun=0;HaplotypeScore=170.8090;InbreedingCoeff=0.7856;MQ=53.41;MQ0=8;MQRankSum=-3.217;QD=33.89;ReadPosRankSum=2.711;VQSLOD=3.5388;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:62.38:0,62,1655	1/1:1,7:8:12.04:357,12,0	0/0:7,0:5:5.28:0,5,91	0/0:7,0:4:12.04:0,12,172	0/0:30,0:30:78.26:0,78,1502	0/0:21,0:21:9.16:0,9,626	0/0:16,0:16:27.92:0,28,512	0/0:25,0:22:63.20:0,63,1172	0/0:20,0:20:57.18:0,57,1581	0/0:26,0:26:78.27:0,78,2508	0/0:16,0:16:48.15:0,48,1538	0/0:16,0:16:45.10:0,45,1214	0/0:9,0:9:27.08:0,27,664	0/0:23,0:23:66.21:0,66,1831	0/0:9,0:9:27.09:0,27,497	0/0:8,0:8:24.08:0,24,432	0/0:21,0:20:54.18:0,54,1866	0/0:17,0:17:48.16:0,48,798	0/0:15,0:12:19.56:0,20,517	0/0:20,0:20:43.78:0,44,1215	0/0:11,0:11:30.10:0,30,727	0/0:17,0:17:51.16:0,51,1240	0/0:12,0:12:33.11:0,33,908	0/0:12,0:12:30.10:0,30,888	0/0:11,0:11:33.11:0,33,1119	0/0:11,0:11:33.11:0,33,1257	0/0:27,0:27:78.25:0,78,1363	0/0:9,0:7:21.07:0,21,439
chr10	45923361	.	A	ACC	6731.95	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-7.473;DP=510;FS=0.425;HRun=8;HaplotypeScore=77.4105;InbreedingCoeff=0.9435;MQ=81.82;MQ0=1;MQRankSum=-3.330;QD=19.46;ReadPosRankSum=1.322;VQSLOD=3.1941;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:25:53.49:571,53,0	1/1:3,0:7:10.39:42,10,0	0/0:14,0:14:15.03:0,15,235	0/0:20,0:19:14.70:0,15,255	1/1:5,10:17:18.01:239,18,0	1/1:2,13:17:26.58:388,27,0	1/1:5,14:21:30.10:457,30,0	1/1:12,12:25:24.08:372,24,0	1/1:18,0:19:47.61:486,48,0	1/1:2,10:12:20.90:300,21,0	1/1:3,9:13:9.02:131,9,0	1/1:17,0:17:21.05:224,21,0	1/1:21,0:21:35.94:351,36,0	1/1:20,0:20:39.05:402,39,0	1/1:2,11:15:24.08:360,24,0	1/1:4,11:15:18.05:267,18,0	0/0:25,0:25:60.14:0,60,667	1/1:1,14:16:24.08:381,24,0	0/0:18,0:18:46.51:0,47,313	0/0:27,0:27:64.40:0,64,457	0/0:12,0:12:25.48:0,25,170	1/1:11,1:13:32.31:318,32,0	1/1:18,0:18:33.09:373,33,0	1/1:22,0:22:26.92:277,27,0	1/1:3,9:14:9.03:131,9,0	1/1:3,13:18:44.64:663,45,0	0/0:43,0:42:99:0,100,555	0/0:5,0:5:5.75:0,6,30
chr10	45923369	.	C	CCT	7279.54	PASS	AB=0.881;AC=37;AF=0.661;AN=56;BaseQRankSum=2.835;DP=517;FS=0.000;HRun=0;HaplotypeScore=71.0888;InbreedingCoeff=-0.0500;MQ=81.12;MQ0=1;MQRankSum=-4.006;QD=15.76;ReadPosRankSum=9.439;VQSLOD=3.9882;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,29:31:60.10:1057,60,0	0/1:9,0:10:23.62:24,0,111	0/0:14,0:14:25.12:0,25,290	0/0:19,0:18:43.14:0,43,448	0/1:13,0:13:49.26:84,0,49	0/1:18,0:18:17.04:160,0,17	1/1:17,0:17:8.67:200,9,0	0/1:15,0:15:10.66:158,0,11	1/1:1,20:21:47.19:854,47,0	0/1:12,0:12:57.57:103,0,58	0/1:15,0:15:41.59:42,0,111	1/1:1,18:20:21.07:396,21,0	1/1:0,19:20:36.12:636,36,0	1/1:3,16:22:40.38:692,40,0	0/1:18,0:19:19.52:138,0,20	0/1:13,1:14:22.97:148,0,23	0/0:22,0:22:66.07:0,66,831	1/1:16,0:16:4.12:154,4,0	0/1:2,0:18:6.47:110,0,6	0/1:8,0:27:72.08:85,0,72	0/1:2,0:13:25.03:36,0,25	1/1:2,14:16:32.14:528,32,0	1/1:1,19:21:34.30:584,34,0	1/1:0,19:20:26.96:510,27,0	0/1:11,0:11:11.51:59,0,12	0/1:22,0:22:99:244,0,111	1/1:2,0:42:59.81:260,60,0	1/1:0,0:7:4.74:17,5,0
chr10	45924127	.	A	AT	234.74	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-3.272;DP=616;FS=3.441;HRun=0;HaplotypeScore=58.1400;InbreedingCoeff=0.9948;MQ=80.07;MQ0=0;MQRankSum=-2.390;QD=26.08;ReadPosRankSum=-0.340;VQSLOD=3.6953;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,111,1544	1/1:1,7:9:21.07:327,21,0	0/0:15,0:15:39.13:0,39,544	0/0:16,0:16:45.11:0,45,584	0/0:23,0:23:66.21:0,66,905	0/0:15,0:15:45.13:0,45,610	0/0:29,0:29:87.28:0,87,1199	0/0:25,0:25:72.23:0,72,992	0/0:20,0:20:57.18:0,57,780	0/0:29,0:29:84.28:0,84,1175	0/0:19,0:19:54.18:0,54,754	0/0:20,0:20:60.20:0,60,838	0/0:15,0:15:45.15:0,45,629	0/0:29,0:29:87.27:0,87,1196	0/0:19,0:19:57.19:0,57,795	0/0:19,0:19:54.17:0,54,737	0/0:30,0:30:90.30:0,90,1259	0/0:15,0:15:45.15:0,45,627	0/0:27,0:27:81.25:0,81,1100	0/0:17,0:17:51.15:0,51,693	0/0:37,0:37:99:0,111,1530	0/0:20,0:20:57.19:0,57,796	0/0:22,0:22:66.22:0,66,923	0/0:31,0:31:93.30:0,93,1282	0/0:17,0:17:51.17:0,51,712	0/0:26,0:26:75.25:0,75,1049	0/0:25,0:25:72.24:0,72,1005	0/0:9,0:9:27.09:0,27,378
chr10	45924882	.	C	CT	4726.94	PASS	AB=0.923;AC=45;AF=0.804;AN=56;BaseQRankSum=0.220;DP=622;FS=11.152;HRun=13;HaplotypeScore=73.6283;InbreedingCoeff=0.7792;MQ=64.24;MQ0=7;MQRankSum=-0.595;QD=9.55;ReadPosRankSum=1.914;VQSLOD=3.1769;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,1:43:42.77:229,43,0	0/0:13,0:14:30.80:0,31,197	0/0:30,0:12:6.10:0,6,35	0/0:20,0:9:17.48:0,17,91	1/1:8,28:36:19.58:513,20,0	1/1:7,18:25:21.18:317,21,0	1/1:6,18:25:3.82:307,4,0	0/0:23,1:27:38.14:0,38,242	1/1:8,1:21:20.05:113,20,0	1/1:4,25:31:59.80:518,60,0	1/1:5,19:24:45.09:432,45,0	1/1:3,0:13:14.04:68,14,0	1/1:15,0:17:28.19:154,28,0	1/1:5,1:15:14.29:74,14,0	1/1:2,10:13:23.86:209,24,0	1/1:4,13:18:25.23:234,25,0	0/0:32,0:35:80.89:0,81,544	1/1:6,22:28:30.50:280,31,0	1/1:4,3:23:50.31:325,50,0	1/1:2,0:22:3.80:170,4,0	1/1:3,0:12:13.34:61,13,0	1/1:1,1:12:16.86:95,17,0	1/1:4,1:21:15.60:88,16,0	1/1:4,0:19:31.15:156,31,0	1/1:2,13:16:9.40:217,9,0	0/1:22,2:24:8.56:9,0,239	1/1:10,0:25:17.04:86,17,0	1/1:1,1:9:12:72,12,0
chr10	45925750	.	T	TCAG	7511.55	PASS	AB=0.543;AC=15;AF=0.268;AN=56;BaseQRankSum=-11.291;DP=703;FS=8.227;HRun=0;HaplotypeScore=106.6181;InbreedingCoeff=0.9354;MQ=89.97;MQ0=0;MQRankSum=-2.693;QD=43.42;ReadPosRankSum=1.812;VQSLOD=6.2226;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:44:99:0,117,1855	1/1:0,10:10:30.10:639,30,0	0/0:28,0:27:69.10:0,69,1059	0/0:28,0:28:45.55:0,46,896	1/1:4,8:15:24.08:530,24,0	0/0:22,0:22:63.22:0,63,1029	0/0:33,0:33:90.23:0,90,1370	0/0:34,0:34:87.29:0,87,1390	0/0:28,0:28:75.26:0,75,1224	1/1:10,21:35:57.63:1185,58,0	1/1:6,14:22:24.08:506,24,0	0/0:19,0:19:54.18:0,54,872	0/0:23,0:23:66.19:0,66,1028	0/0:24,0:24:69.24:0,69,1127	1/1:2,28:31:78.27:1741,78,0	1/1:1,19:20:54.18:1178,54,0	0/0:31,0:31:81.28:0,81,1323	0/1:3,16:19:3.86:864,0,4	0/0:29,0:28:84.28:0,84,1335	0/0:30,0:30:84.27:0,84,1345	0/0:21,0:21:63.22:0,63,1029	0/0:30,0:30:78.18:0,78,1148	0/0:23,0:23:63.20:0,63,994	0/0:26,0:25:78.27:0,78,1274	1/1:4,16:21:39.13:869,39,0	0/0:23,0:23:53.62:0,54,830	0/0:18,0:18:48.16:0,48,776	0/0:15,0:15:45.15:0,45,731
chr10	45925944	.	TTC	T	553.58	PASS	AB=0.954;AC=30;AF=0.682;AN=44;BaseQRankSum=3.443;DP=610;FS=0.000;HRun=0;HaplotypeScore=98.0118;InbreedingCoeff=0.3586;MQ=61.99;MQ0=19;MQRankSum=-0.821;QD=1.63;ReadPosRankSum=3.742;VQSLOD=1.5189;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:31,0:31:8.99:74,9,0	1/1:6,0:7:2.63:14,3,0	0/0:33,0:22:0:0,0,0	./.	./.	0/1:18,0:16:0:0,0,0	1/1:26,0:23:2.37:8,2,0	./.	1/1:18,5:23:9.02:96,9,0	0/0:28,0:27:21.02:0,21,248	0/1:23,1:24:19.81:20,0,77	1/1:17,0:17:3.48:33,3,0	1/1:18,1:17:3.01:32,3,0	1/1:13,2:14:5.81:45,6,0	0/0:28,0:28:9.03:0,9,112	0/0:14,0:16:6.01:0,6,63	1/1:20,0:20:6.32:46,6,0	1/1:12,2:15:11.82:109,12,0	./.	1/1:18,0:21:8.52:42,9,0	0/0:24,0:23:0:0,0,1	./.	0/1:16,0:14:0:0,0,0	1/1:24,1:33:14.37:88,14,0	0/1:15,0:18:15.11:18,0,15	1/1:9,0:17:5.68:28,6,0	1/1:12,0:17:5.28:27,5,0	./.
chr10	45926339	.	GAT	G	5419.35	PASS	AB=0.535;AC=43;AF=0.768;AN=56;BaseQRankSum=-2.257;DP=526;FS=5.356;HRun=0;HaplotypeScore=82.2941;InbreedingCoeff=0.7672;MQ=71.05;MQ0=31;MQRankSum=-1.061;QD=15.75;ReadPosRankSum=2.257;VQSLOD=4.0632;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:18:36.16:295,36,0	1/1:3,0:3:8.99:75,9,0	0/0:31,0:14:29.25:0,29,223	0/0:63,0:25:35.47:0,35,265	0/0:11,2:13:0.47:0,0,1	0/0:19,0:17:43.09:0,43,357	0/0:37,0:34:86.96:0,87,682	1/1:32,0:31:79.30:696,79,0	1/1:14,0:13:35.84:285,36,0	1/1:19,0:18:44.40:359,44,0	1/1:16,0:16:38.25:307,38,0	1/1:9,0:9:13.43:96,13,0	1/1:10,0:9:2.74:12,3,0	1/1:12,0:12:12:102,12,0	1/1:15,0:15:9.01:97,9,0	1/1:11,0:11:6.50:192,6,0	0/0:19,0:19:41.88:0,42,374	1/1:0,12:12:15.05:219,15,0	1/1:2,18:20:54.91:450,55,0	1/1:14,0:14:35.58:275,36,0	1/1:11,0:11:29.96:247,30,0	1/1:13,1:12:9:78,9,0	1/1:18,0:13:29.66:222,30,0	1/1:19,0:18:8.04:36,8,0	1/1:19,0:19:50.27:425,50,0	1/1:23,0:23:62.90:548,63,0	1/1:9,3:12:36.01:341,36,0	0/1:3,20:21:8.90:62,0,9
chr10	45926340	.	ATATCTCTCTCTC	A	5811.15	PASS	AB=0.972;AC=31;AF=0.554;AN=56;BaseQRankSum=-5.758;DP=516;FS=10.498;HRun=0;HaplotypeScore=147.5092;InbreedingCoeff=0.4407;MQ=68.67;MQ0=31;MQRankSum=1.785;QD=20.11;ReadPosRankSum=1.268;VQSLOD=3.2345;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:17,0:17:81.01:154,0,81	0/1:4,0:4:28.11:39,0,28	0/0:30,0:13:33.01:0,33,233	0/0:61,0:23:35.39:0,35,265	0/0:3,0:13:3.01:0,3,38	0/0:19,0:17:44.92:0,45,669	0/0:36,0:33:89.96:0,90,1134	1/1:31,0:30:77.90:694,78,0	1/1:12,1:13:34.90:384,35,0	1/1:3,16:18:44.79:496,45,0	1/1:15,0:15:38.81:308,39,0	1/1:0,9:9:15.05:515,15,0	1/1:1,8:8:3.01:84,3,0	1/1:2,10:12:12.04:457,12,0	0/0:3,0:15:9.03:0,9,233	0/1:12,0:12:94.62:95,0,580	0/0:18,0:18:41.96:0,42,837	0/0:12,0:12:18.06:0,18,569	1/1:20,0:20:54.91:450,55,0	0/1:13,0:13:0.92:214,0,1	1/1:11,0:11:29.96:247,30,0	1/1:3,10:12:9.03:283,9,0	1/1:16,2:13:28.85:446,29,0	1/1:3,15:17:8.91:161,9,0	0/1:18,0:19:12.07:285,0,12	0/1:22,0:22:26.40:387,0,26	0/1:10,0:12:99:114,0,257	0/0:23,0:21:9.03:0,9,314
chr10	45926342	.	A	ATC	80.38	PASS	AB=0.973;AC=23;AF=0.479;AN=48;BaseQRankSum=-0.564;DP=551;FS=1.500;HRun=0;HaplotypeScore=109.4538;InbreedingCoeff=0.2276;MQ=66.01;MQ0=35;MQRankSum=-0.728;QD=0.23;ReadPosRankSum=-0.548;VQSLOD=1.9159;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:18:2.69:0,3,12	0/0:4,0:4:2.80:0,3,13	./.	0/1:60,0:22:0:0,0,0	1/1:18,0:18:1.25:3,1,0	0/0:18,0:17:5.68:0,6,28	0/1:33,0:32:12.03:12,0,38	1/1:35,0:34:0.89:2,1,0	0/0:14,0:13:5.41:0,5,25	1/1:20,0:19:5.19:22,5,0	./.	0/1:9,0:9:5.11:5,0,25	1/1:10,0:8:2.84:14,3,0	0/0:10,0:10:9.77:0,10,45	0/0:17,0:17:8.58:0,9,44	0/1:15,0:15:8.07:8,0,40	0/1:16,4:20:34.82:35,0,43	0/0:12,0:12:14.43:0,14,77	./.	0/1:17,0:17:0:0,0,0	./.	0/0:14,0:12:7.90:0,8,35	1/1:20,0:15:5.72:30,6,0	1/1:20,0:18:3.63:9,4,0	1/1:19,0:19:2.22:7,2,0	1/1:26,0:24:5.61:52,6,0	0/0:14,0:14:8.82:0,9,49	0/1:26,0:24:15.21:15,0,21
chr10	45927545	.	T	TTGTG	5411.75	PASS	AB=1.000;AC=51;AF=0.911;AN=56;BaseQRankSum=2.666;DP=646;FS=4.314;HRun=0;HaplotypeScore=178.2024;InbreedingCoeff=0.4516;MQ=57.28;MQ0=3;MQRankSum=-2.979;QD=8.99;ReadPosRankSum=-1.948;VQSLOD=3.8763;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:29:8.06:115,8,0	1/1:14,0:14:6.02:92,6,0	0/1:28,0:22:0.82:1,0,42	0/0:22,0:14:3.01:0,3,37	1/1:25,0:24:3.01:42,3,0	1/1:16,10:29:21.07:499,21,0	1/1:12,4:20:11.51:133,12,0	1/1:28,0:28:29.98:381,30,0	1/1:19,0:22:5.91:104,6,0	1/1:30,0:28:18.06:366,18,0	1/1:13,0:18:6.02:88,6,0	1/1:13,0:15:9.03:157,9,0	1/1:11,0:12:6.49:105,6,0	1/1:13,1:24:24.08:417,24,0	1/1:19,0:21:15.05:243,15,0	1/1:19,0:29:23.75:404,24,0	0/0:19,0:20:11.19:0,11,402	1/1:22,0:24:15.52:259,16,0	1/1:19,0:21:13.27:177,13,0	1/1:18,2:27:18.06:300,18,0	1/1:23,0:24:2.62:52,3,0	1/1:16,1:25:12.04:209,12,0	1/1:6,1:16:9.03:176,9,0	1/1:17,1:26:18.39:332,18,0	1/1:26,0:28:6.02:95,6,0	1/1:20,0:19:12.04:208,12,0	1/1:27,0:33:24.55:405,25,0	1/1:8,0:10:3.01:52,3,0
chr10	45928619	.	A	AC	1728.18	PASS	AB=0.917;AC=5;AF=0.089;AN=56;BaseQRankSum=-8.673;DP=800;FS=5.522;HRun=1;HaplotypeScore=70.4422;InbreedingCoeff=0.8293;MQ=58.61;MQ0=18;MQRankSum=-0.266;QD=26.18;ReadPosRankSum=0.672;VQSLOD=3.3356;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,146,1813	0/0:12,0:12:36.09:0,36,445	0/0:53,0:7:15.58:0,16,156	0/0:46,0:9:14.07:0,14,155	0/0:14,0:14:39.13:0,39,505	1/1:1,23:24:60.20:882,60,0	1/1:1,30:31:69.19:967,69,0	0/0:33,0:33:93.30:0,93,1190	0/0:17,0:17:51.17:0,51,659	0/0:30,0:30:84.27:0,84,1066	0/0:22,0:22:60.18:0,60,754	0/0:32,0:32:81.26:0,81,1039	0/0:30,0:30:90.29:0,90,1161	0/0:32,0:32:92.98:0,93,1178	0/0:32,0:32:92.31:0,92,1150	0/0:27,0:27:80.29:0,80,1011	0/0:20,0:20:60.16:0,60,748	0/0:16,0:16:39.08:0,39,485	0/0:23,0:21:56.21:0,56,690	0/0:27,0:27:72.22:0,72,911	0/0:47,0:47:99:0,125,1549	0/0:28,0:28:71.02:0,71,897	0/0:14,0:14:39.13:0,39,504	0/0:41,0:41:99:0,120,1531	0/0:25,0:25:74.27:0,74,938	0/0:27,0:27:77.28:0,77,972	0/0:31,0:31:56.38:0,56,1040	0/1:10,1:11:3.19:3,0,352
chr10	45929177	.	A	AAC	1160.57	PASS	AB=0.852;AC=27;AF=0.540;AN=50;BaseQRankSum=-2.064;DP=607;FS=10.570;HRun=0;HaplotypeScore=113.9289;InbreedingCoeff=0.2442;MQ=54.96;MQ0=14;MQRankSum=1.512;QD=3.25;ReadPosRankSum=-2.676;VQSLOD=1.3704;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:29,2:32:0.71:256,1,0	0/0:4,0:5:2.37:0,2,8	./.	./.	1/1:36,0:36:7.93:83,8,0	0/0:13,0:22:16.85:0,17,80	0/0:10,0:16:5.68:0,6,28	1/1:22,0:22:2.92:17,3,0	1/1:15,5:21:3.01:44,3,0	1/1:22,0:22:27.59:199,28,0	1/1:16,0:16:3.35:39,3,0	0/1:6,5:12:2.24:113,0,2	0/1:14,6:21:23.01:79,0,23	0/1:13,1:15:29.16:29,0,98	1/1:26,0:26:11.65:81,12,0	1/1:20,0:20:8.96:77,9,0	0/0:17,0:30:8.52:0,9,42	1/1:13,0:12:5.96:45,6,0	./.	0/0:13,0:17:5.68:0,6,28	0/0:21,0:28:2.84:0,3,14	0/1:16,0:17:14.93:15,0,49	0/1:18,0:18:8.63:76,0,9	0/1:22,13:38:22.88:116,0,23	1/1:23,0:21:5.88:47,6,0	0/0:17,0:23:8.52:0,9,42	0/0:9,0:18:11.36:0,11,56	0/1:4,0:4:0:0,0,0
chr10	45929521	.	AC	A	8307.01	PASS	AB=0.536;AC=25;AF=0.446;AN=56;BaseQRankSum=12.978;DP=483;FS=2.472;HRun=1;HaplotypeScore=46.6439;InbreedingCoeff=0.9172;MQ=56.15;MQ0=2;MQRankSum=4.696;QD=37.42;ReadPosRankSum=2.638;VQSLOD=5.0505;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,32:33:87.29:1217,87,0	0/0:7,0:7:21.07:0,21,335	0/0:16,0:8:21.04:0,21,309	0/0:10,0:7:21.07:0,21,324	0/0:20,0:20:54.18:0,54,854	0/0:21,0:21:63.21:0,63,990	0/0:21,0:21:63.21:0,63,1006	0/0:27,0:27:81.24:0,81,1226	1/1:0,15:15:42.14:587,42,0	0/0:19,0:19:57.19:0,57,910	0/0:14,0:14:42.14:0,42,669	1/1:0,9:9:27.09:378,27,0	1/1:0,11:11:33.11:461,33,0	1/1:0,21:21:60.20:839,60,0	0/0:16,0:16:42.14:0,42,669	0/0:19,0:19:54.18:0,54,852	0/0:24,0:24:72.25:0,72,1149	0/0:9,0:9:25.64:0,26,388	1/1:0,15:15:42.14:586,42,0	1/1:0,20:20:60.20:839,60,0	1/1:0,10:10:24.08:336,24,0	1/1:0,13:13:36.12:503,36,0	1/1:0,23:23:69.23:965,69,0	0/1:2,13:15:56.62:383,0,57	0/0:11,0:10:30.10:0,30,479	0/0:27,0:27:81.23:0,81,1265	1/1:0,32:32:78.26:1087,78,0	1/1:0,5:5:9.03:126,9,0
chr10	45929797	.	AGAG	A	12929.36	PASS	AB=0.971;AC=51;AF=0.911;AN=56;BaseQRankSum=6.819;DP=588;FS=14.339;HRun=0;HaplotypeScore=105.5090;InbreedingCoeff=0.7361;MQ=58.43;MQ0=12;MQRankSum=1.293;QD=24.21;ReadPosRankSum=2.027;VQSLOD=4.1571;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,18:26:29.42:433,29,0	1/1:2,7:9:18.06:260,18,0	0/0:29,0:13:15.05:0,15,278	0/1:32,0:12:14.69:15,0,280	1/1:1,27:28:81.12:1068,81,0	1/1:2,22:24:39.13:564,39,0	1/1:5,15:20:27.09:390,27,0	1/1:13,26:35:63.20:884,63,0	1/1:4,19:23:39.13:561,39,0	1/1:6,21:27:63.18:873,63,0	1/1:4,14:18:36.03:473,36,0	1/1:2,9:11:21.07:304,21,0	1/1:1,11:12:21.07:304,21,0	1/1:4,10:14:15.05:217,15,0	1/1:5,18:23:42.14:607,42,0	1/1:1,12:13:26.83:390,27,0	0/0:23,0:23:59.99:0,60,1168	1/1:6,6:12:12.04:174,12,0	1/1:11,3:12:15.05:216,15,0	1/1:10,24:33:69.09:907,69,0	1/1:4,11:14:15.05:217,15,0	1/1:2,16:18:39.09:540,39,0	1/1:3,20:23:42.61:608,43,0	1/1:5,19:24:42.14:607,42,0	1/1:2,9:11:12.04:173,12,0	1/1:3,31:34:93.27:1301,93,0	1/1:6,15:22:42.11:585,42,0	1/1:1,6:7:18.06:260,18,0
chr10	45930181	.	A	AAATC	14503.48	PASS	AB=0.619;AC=33;AF=0.589;AN=56;BaseQRankSum=-2.406;DP=624;FS=0.788;HRun=0;HaplotypeScore=108.4856;InbreedingCoeff=0.9115;MQ=62.42;MQ0=0;MQRankSum=-2.462;QD=38.37;ReadPosRankSum=2.387;VQSLOD=5.2708;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,20:30:72.18:1609,72,0	0/0:10,0:10:21.07:0,21,343	0/0:36,0:34:48.11:0,48,702	0/0:22,0:21:21.06:0,21,318	1/1:16,0:28:39.11:656,39,0	0/1:10,15:26:6.82:907,0,7	1/1:4,11:16:27.09:655,27,0	0/0:25,0:25:36.11:0,36,542	1/1:5,18:23:51.18:1241,51,0	1/1:12,0:31:60.19:953,60,0	1/1:9,1:23:39.12:658,39,0	1/1:4,13:19:36.12:876,36,0	1/1:4,18:23:54.19:1292,54,0	1/1:5,15:20:36.12:873,36,0	1/1:7,0:24:51.17:895,51,0	1/1:7,0:16:27.09:454,27,0	0/0:36,0:36:72.20:0,72,1143	1/1:5,1:7:3.01:52,3,0	0/0:21,0:21:45.15:0,45,712	0/0:23,0:25:63.19:0,63,964	0/0:12,0:11:18.04:0,18,269	1/1:8,11:20:27.09:657,27,0	1/1:11,18:29:45.11:1015,45,0	1/1:7,16:22:51.18:1236,51,0	1/1:6,0:19:27.09:475,27,0	0/0:20,0:20:42.14:0,42,665	0/0:24,0:23:60.16:0,60,888	0/0:15,0:15:33.06:0,33,464
chr10	45930346	.	A	AG	20846.57	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-10.126;DP=619;FS=1.649;HRun=2;HaplotypeScore=58.1436;InbreedingCoeff=0.9941;MQ=78.30;MQ0=3;MQRankSum=-4.498;QD=38.46;ReadPosRankSum=4.965;VQSLOD=5.1402;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,42:42:99:1597,111,0	1/1:1,6:7:15.05:216,15,0	0/0:27,0:23:56.73:0,57,663	0/0:32,0:28:48.46:0,48,775	1/1:0,16:16:48.09:666,48,0	1/1:0,22:22:63.21:907,63,0	1/1:1,17:18:51.17:734,51,0	1/1:1,24:25:51.03:974,51,0	1/1:1,29:30:75.25:1073,75,0	1/1:0,19:19:57.17:785,57,0	1/1:3,19:22:54.18:777,54,0	1/1:3,17:20:48.16:684,48,0	1/1:3,30:33:87.29:1252,87,0	1/1:2,11:13:33.11:475,33,0	1/1:1,22:23:63.21:906,63,0	1/1:0,15:15:36.12:511,36,0	0/0:18,0:18:54.16:0,54,657	1/1:0,15:14:42.14:605,42,0	1/1:1,15:16:45.14:630,45,0	1/1:1,32:33:90.30:1295,90,0	1/1:0,22:22:63.21:907,63,0	1/1:4,17:21:54.18:769,54,0	1/1:1,22:23:60.20:864,60,0	1/1:1,24:25:72.24:1026,72,0	1/1:1,17:18:45.15:647,45,0	1/1:5,22:27:72.20:993,72,0	1/1:0,24:24:72.24:1036,72,0	1/1:1,12:13:36.12:519,36,0
chr10	45932801	.	G	GA	2124.22	PASS	AB=1.000;AC=27;AF=0.482;AN=56;BaseQRankSum=7.237;DP=424;FS=13.467;HRun=8;HaplotypeScore=63.9577;InbreedingCoeff=0.8434;MQ=59.20;MQ0=9;MQRankSum=-2.295;QD=12.64;ReadPosRankSum=1.209;VQSLOD=1.5768;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,16:23:50.02:546,50,0	0/0:5,0:5:5.81:0,6,33	0/1:19,0:7:5.27:5,0,111	0/0:20,0:8:13.40:0,13,101	0/0:26,0:26:50.86:0,51,462	0/0:18,0:18:22.15:0,22,72	0/0:11,0:10:14.53:0,15,41	0/0:41,0:41:90.44:0,90,813	1/1:2,10:9:21.06:241,21,0	0/0:19,0:19:44.85:0,45,408	0/0:14,0:14:23.99:0,24,215	1/1:5,1:5:8.92:85,9,0	1/1:1,9:10:20.87:220,21,0	1/1:1,6:7:12.03:137,12,0	0/0:15,0:13:18:0,18,165	0/0:12,0:11:8.87:0,9,82	0/0:25,0:24:54.01:0,54,494	0/0:11,0:11:15.75:0,16,152	1/1:3,1:18:44.79:239,45,0	1/1:4,0:15:19.74:102,20,0	1/1:2,0:5:6.15:30,6,0	1/1:2,2:4:3.01:34,3,0	1/1:3,11:12:27.53:300,28,0	1/1:3,9:12:22.31:244,22,0	0/0:21,0:21:24.01:0,24,220	0/0:18,0:18:47.99:0,48,432	1/1:2,2:11:20.19:126,20,0	1/1:0,0:2:5.68:29,6,0
chr10	45932809	.	AC	A	1896.84	PASS	AB=1.000;AC=31;AF=0.554;AN=56;BaseQRankSum=11.472;DP=392;FS=21.003;HRun=2;HaplotypeScore=59.1239;InbreedingCoeff=0.8722;MQ=65.52;MQ0=6;MQRankSum=-2.537;QD=10.96;ReadPosRankSum=3.818;VQSLOD=0.3003;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:21:37.16:144,37,0	0/0:4,0:4:5.52:0,6,25	0/0:17,0:8:22.80:0,23,242	0/0:20,0:9:4.11:0,4,125	0/0:29,0:29:66.11:0,66,834	1/1:0,19:19:51.17:657,51,0	1/1:0,11:10:24.08:307,24,0	0/0:38,0:39:99:0,111,1502	1/1:10,0:9:16.70:62,17,0	0/0:16,0:16:48.15:0,48,660	0/0:11,0:11:24.08:0,24,331	1/1:4,0:3:7.71:35,8,0	1/1:10,0:10:18.56:78,19,0	1/1:7,0:7:14.03:72,14,0	0/0:12,0:12:21.05:0,21,277	0/0:12,0:12:18.03:0,18,205	0/0:25,0:25:69.12:0,69,878	0/1:10,0:10:0.84:1,0,250	1/1:18,0:17:43.18:207,43,0	1/1:12,0:12:20.88:91,21,0	1/1:4,0:4:7.97:45,8,0	1/1:3,0:3:5.03:30,5,0	1/1:13,0:12:28.14:132,28,0	1/1:9,0:9:13.13:40,13,0	0/0:17,0:17:24.08:0,24,340	0/0:16,0:16:48.15:0,48,661	1/1:13,0:11:15.08:58,15,0	1/1:7,0:7:20.42:153,20,0
chr10	45933774	.	TAA	T	1702.13	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=4.419;DP=340;FS=1.104;HRun=13;HaplotypeScore=44.4972;InbreedingCoeff=0.8950;MQ=61.62;MQ0=2;MQRankSum=-0.091;QD=18.11;ReadPosRankSum=2.078;VQSLOD=2.3354;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:69.18:0,69,956	0/0:7,0:7:18.06:0,18,250	0/0:6,0:5:15.01:0,15,175	0/1:3,0:2:0.48:0,0,31	0/0:26,0:26:54.11:0,54,724	1/1:2,12:15:35.77:332,36,0	1/1:1,10:11:21.02:204,21,0	0/0:17,0:27:56.95:0,57,548	0/0:11,0:11:27.02:0,27,366	0/0:14,0:16:32.52:0,33,349	0/0:16,0:18:44.57:0,45,542	0/0:7,0:7:18.06:0,18,261	0/0:3,0:3:9.03:0,9,130	0/0:6,0:6:12.04:0,12,174	0/0:9,0:11:23.56:0,24,296	0/0:8,0:8:20.55:0,21,254	0/0:17,0:19:49.11:0,49,598	0/0:15,0:16:41.61:0,42,553	1/1:6,16:23:50.76:477,51,0	1/1:3,11:14:29.90:272,30,0	1/1:1,7:8:18.02:175,18,0	0/0:4,0:5:8.52:0,9,95	0/0:7,0:7:18.06:0,18,261	0/0:4,0:4:9.02:0,9,107	0/0:4,0:4:12.04:0,12,174	0/0:4,0:8:15:0,15,135	1/1:1,10:11:27.04:262,27,0	1/1:2,7:9:17.97:175,18,0
chr10	45933924	.	TA	T	391.73	PASS	AB=0.875;AC=6;AF=0.107;AN=56;BaseQRankSum=-0.609;DP=391;FS=3.664;HRun=10;HaplotypeScore=55.5216;InbreedingCoeff=0.5209;MQ=65.56;MQ0=0;MQRankSum=1.295;QD=11.19;ReadPosRankSum=-0.093;VQSLOD=2.6897;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:74.77:0,75,462	0/1:2,1:3:20.04:20,0,27	0/0:8,0:7:14.40:0,14,138	0/0:11,0:11:23.71:0,24,227	0/0:20,0:20:54.13:0,54,583	1/1:2,15:17:44.99:391,45,0	1/1:2,5:7:11.99:104,12,0	0/0:23,1:24:40.12:0,40,671	0/0:10,0:10:27.79:0,28,156	0/0:10,0:10:27.07:0,27,299	0/0:13,0:13:33.08:0,33,355	0/0:9,0:9:0.86:0,1,100	0/1:8,0:8:0.65:1,0,87	0/0:10,0:10:3.85:0,4,114	0/0:13,1:14:7.04:0,7,306	0/0:13,0:13:39.04:0,39,410	0/0:30,0:30:87.22:0,87,953	0/0:11,0:11:30.01:0,30,299	0/0:30,0:30:49.53:0,50,369	0/0:12,0:12:29.24:0,29,175	0/0:8,0:8:18.68:0,19,119	0/0:3,0:3:7.31:0,7,34	0/0:4,0:4:11.74:0,12,71	0/0:13,1:14:12.02:0,12,187	0/0:13,0:13:30.08:0,30,332	0/0:15,0:15:45.11:0,45,491	0/0:26,0:26:54.52:0,55,335	0/0:11,0:11:29.57:0,30,196
chr10	45934234	.	G	GGAGGCA	3685.16	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-7.239;DP=606;FS=0.635;HRun=0;HaplotypeScore=117.6055;InbreedingCoeff=0.9835;MQ=57.77;MQ0=14;MQRankSum=-6.595;QD=39.63;ReadPosRankSum=0.926;VQSLOD=3.4453;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:41:99:0,111,2112	0/0:9,0:9:24.08:0,24,502	0/0:29,0:15:12.04:0,12,241	0/0:26,0:15:30.07:0,30,466	0/0:24,0:23:51.60:0,52,883	0/0:19,0:19:48.16:0,48,1024	0/0:30,0:30:66.23:0,66,1441	0/0:32,0:31:54.18:0,54,1051	0/0:20,0:19:54.17:0,54,1114	0/0:30,0:29:60.17:0,60,1055	0/0:18,0:18:45.58:0,46,824	0/0:9,0:9:24.08:0,24,498	0/0:16,0:16:33.11:0,33,697	0/0:15,0:15:42.13:0,42,875	0/0:26,0:26:66.21:0,66,1399	0/0:18,0:18:51.14:0,51,950	0/0:33,0:33:87.30:0,87,1857	0/0:30,0:30:68.82:0,69,1422	1/1:5,6:11:24.02:582,24,0	1/1:10,10:20:33.11:978,33,0	1/1:12,20:33:14.98:506,15,0	0/0:19,0:19:33.05:0,33,597	0/0:12,0:11:18.01:0,18,175	0/0:15,0:15:39.11:0,39,771	0/0:18,0:18:39.13:0,39,830	0/0:23,0:23:60.17:0,60,1070	1/1:4,13:17:30.10:1012,30,0	1/1:2,7:10:18.06:608,18,0
chr10	45934791	.	TCA	T	8045.20	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=13.623;DP=725;FS=5.360;HRun=0;HaplotypeScore=135.3087;InbreedingCoeff=0.9946;MQ=90.58;MQ0=0;MQRankSum=-7.225;QD=38.13;ReadPosRankSum=3.156;VQSLOD=6.8717;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,45:45:99:1789,117,0	0/0:5,0:5:12.04:0,12,232	0/0:24,0:24:72.21:0,72,1277	0/0:35,0:35:99:0,102,1868	0/0:35,0:35:99:0,102,1923	0/0:19,0:19:57.20:0,57,1086	0/0:20,0:20:60.19:0,60,1121	0/0:38,0:38:99:0,114,2142	1/1:0,21:21:63.21:964,63,0	0/0:39,0:39:99:0,111,2098	0/0:18,0:18:44.98:0,45,823	1/1:1,29:30:78.26:1183,78,0	1/1:0,18:18:48.16:733,48,0	1/1:2,17:19:42.14:625,42,0	0/0:34,0:33:99:0,99,1910	0/0:25,1:26:32.34:0,32,1402	0/0:36,0:36:99:0,108,2062	0/0:14,0:14:40.38:0,40,756	0/0:23,0:23:69.22:0,69,1244	0/0:24,0:24:69.20:0,69,1240	0/0:42,0:42:99:0,123,2208	1/1:1,28:29:72.24:1101,72,0	1/1:1,19:20:45.15:688,45,0	1/1:0,29:29:62.94:963,63,0	0/0:18,0:18:54.19:0,54,1041	0/0:34,0:34:99:0,99,1872	0/0:21,0:20:63.22:0,63,1214	0/0:9,0:9:27.08:0,27,487
chr10	45935334	.	T	TA	17121.84	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-9.125;DP=692;FS=0.000;HRun=8;HaplotypeScore=66.6347;InbreedingCoeff=0.9360;MQ=68.73;MQ0=0;MQRankSum=-2.832;QD=27.48;ReadPosRankSum=1.889;VQSLOD=5.3307;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,31:39:90.10:1019,90,0	0/0:19,0:19:48.01:0,48,439	0/0:13,0:13:14.53:0,15,218	0/0:7,0:7:2.04:0,2,34	1/1:3,21:24:68.41:761,68,0	1/1:1,20:22:60.18:692,60,0	1/1:2,16:17:36.11:415,36,0	1/1:3,24:28:75.01:815,75,0	1/1:2,18:20:48.14:554,48,0	1/1:7,31:38:68.74:994,69,0	1/1:2,27:29:78.23:900,78,0	1/1:3,17:20:48.14:554,48,0	1/1:3,25:28:63.19:727,63,0	1/1:4,19:24:57:637,57,0	1/1:6,22:28:60.18:693,60,0	1/1:3,24:27:69.21:796,69,0	0/0:30,0:30:84:0,84,754	1/1:1,19:20:45.13:519,45,0	1/1:4,15:19:45.11:506,45,0	1/1:6,29:35:78.09:855,78,0	1/1:2,15:18:42.06:458,42,0	1/1:5,22:27:66.02:727,66,0	1/1:4,26:30:72.21:831,72,0	1/1:5,16:21:48.14:554,48,0	1/1:4,26:30:75.22:865,75,0	1/1:1,22:23:66.20:762,66,0	1/1:5,32:37:77.97:900,78,0	1/1:1,17:18:51.15:589,51,0
chr10	45935896	.	TTTGTTG	T	1061.23	PASS	AB=0.992;AC=8;AF=0.143;AN=56;BaseQRankSum=-2.212;DP=750;FS=7.763;HRun=0;HaplotypeScore=223.4325;InbreedingCoeff=0.3109;MQ=73.59;MQ0=6;MQRankSum=1.067;QD=8.49;ReadPosRankSum=0.436;VQSLOD=1.3675;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:74.65:0,75,823	0/0:10,0:10:30.10:0,30,792	0/0:42,0:39:68.15:0,68,1336	0/0:22,0:19:33.07:0,33,794	0/0:25,0:25:57.19:0,57,1163	0/0:26,0:26:60.17:0,60,1248	0/0:30,0:28:63.21:0,63,1742	0/0:26,0:25:42.11:0,42,889	0/0:26,0:26:48.06:0,48,771	0/0:24,0:24:60.21:0,60,1448	0/0:20,0:20:45.15:0,45,960	0/0:32,0:32:82.76:0,83,1444	0/0:31,0:31:66.90:0,67,1138	0/0:27,0:27:53.17:0,53,887	0/0:37,0:37:87.26:0,87,2288	0/0:33,0:33:81.26:0,81,2457	0/0:32,0:32:84.24:0,84,2408	0/0:14,0:13:36.10:0,36,924	1/1:6,8:14:23.99:282,24,0	1/1:4,16:20:0.08:31,0,0	0/1:33,0:33:29.67:624,0,30	0/0:17,0:17:9.37:0,9,98	0/1:19,0:19:7.56:8,0,159	0/0:46,0:45:91.77:0,92,1881	0/0:19,0:19:51.17:0,51,1329	0/0:38,0:38:87.23:0,87,1753	0/1:29,0:30:99:167,0,606	0/1:9,0:9:80.26:84,0,80
chr10	45935908	.	G	GC	110.54	PASS	AB=0.863;AC=2;AF=0.036;AN=56;BaseQRankSum=3.508;DP=727;FS=0.939;HRun=0;HaplotypeScore=161.6690;InbreedingCoeff=-0.0418;MQ=60.41;MQ0=9;MQRankSum=0.201;QD=2.76;ReadPosRankSum=3.990;VQSLOD=3.0939;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,131,1317	0/0:11,0:11:33.11:0,33,435	0/0:40,0:29:82.37:0,82,1022	0/0:31,0:21:51.14:0,51,683	0/0:22,0:22:60.19:0,60,823	0/0:22,0:22:63.19:0,63,837	0/0:34,0:32:90.24:0,90,1143	0/0:19,0:17:51.17:0,51,705	0/0:26,0:25:59.71:0,60,573	0/0:23,0:23:69.23:0,69,959	0/0:19,0:19:45.15:0,45,628	0/0:34,0:34:95.51:0,96,879	0/0:31,0:31:83.55:0,84,846	0/0:25,0:25:68.71:0,69,645	0/0:33,0:33:96.29:0,96,1292	0/0:29,0:29:82.81:0,83,1120	0/0:33,0:33:96.26:0,96,1295	0/0:14,0:13:39.11:0,39,523	0/1:11,0:11:5.99:6,0,99	0/0:18,0:18:4.77:0,5,24	0/0:36,0:36:25.23:0,25,199	0/0:19,0:19:50.38:0,50,567	0/0:19,0:19:51:0,51,549	0/0:45,0:44:99:0,102,1009	0/0:19,0:19:54.01:0,54,727	0/0:30,0:30:87.28:0,87,1197	0/1:18,11:29:99:184,0,155	0/0:6,1:7:3.11:0,3,88
chr10	45935909	.	T	TGC	746.44	PASS	AB=0.943;AC=7;AF=0.125;AN=56;BaseQRankSum=12.829;DP=731;FS=4.602;HRun=0;HaplotypeScore=176.2139;InbreedingCoeff=-0.1491;MQ=60.05;MQ0=9;MQRankSum=-1.943;QD=3.66;ReadPosRankSum=9.723;VQSLOD=1.3621;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:98.20:0,98,1170	0/0:11,0:11:33.03:0,33,415	0/0:40,0:29:80.10:0,80,1126	0/0:32,0:21:57.17:0,57,825	0/0:20,0:20:60.19:0,60,951	0/0:21,0:21:63.19:0,63,948	0/0:34,0:32:93.16:0,93,1302	0/0:21,0:18:51.17:0,51,822	0/1:28,0:27:38.49:38,0,228	0/0:24,0:24:69.23:0,69,1091	0/0:19,0:19:45.15:0,45,732	0/1:37,0:37:99:159,0,332	0/1:32,0:32:63.93:64,0,388	0/1:26,0:26:71.22:71,0,334	0/0:32,0:32:93.29:0,93,1469	0/0:28,0:28:84.27:0,84,1326	0/0:34,0:34:94.84:0,95,1464	0/0:13,0:12:36.12:0,36,577	0/0:11,0:11:25.84:0,26,207	0/0:18,0:18:3.88:0,4,26	0/0:36,0:36:14.33:0,14,245	0/0:18,0:18:47.13:0,47,600	0/0:18,0:18:47.92:0,48,531	0/1:45,0:44:99:156,0,271	0/0:19,0:19:54.16:0,54,852	0/0:29,0:29:84.29:0,84,1347	0/1:18,11:29:99:374,0,127	0/1:6,1:7:13.74:14,0,76
chr10	45935911	.	G	GC	972.64	PASS	AB=0.814;AC=8;AF=0.143;AN=56;BaseQRankSum=11.856;DP=726;FS=2.476;HRun=0;HaplotypeScore=164.0133;InbreedingCoeff=-0.1796;MQ=55.50;MQ0=9;MQRankSum=-1.943;QD=3.73;ReadPosRankSum=9.813;VQSLOD=2.5846;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:47,3:50:36.51:37,0,257	0/0:11,0:11:32.94:0,33,317	0/0:40,0:26:74.18:0,74,949	0/0:32,0:20:54.16:0,54,729	0/0:19,0:19:57.19:0,57,795	0/0:19,0:19:56.85:0,57,662	0/0:33,0:31:92.04:0,92,854	0/0:21,0:18:53.88:0,54,690	0/1:19,8:26:78.39:101,0,78	0/0:25,0:25:72.24:0,72,1001	0/0:19,0:19:45.04:0,45,571	0/1:20,16:36:88.42:223,0,88	0/1:21,11:32:99:138,0,144	0/1:17,8:25:99:130,0,138	0/0:30,0:30:90.29:0,90,1237	0/0:28,0:28:84.26:0,84,1134	0/0:34,0:34:99:0,99,1347	0/0:13,0:12:36.12:0,36,494	0/0:11,0:11:17.41:0,17,116	0/0:20,0:20:3.85:0,4,22	0/0:37,0:37:26.42:0,26,219	0/0:17,0:17:39.52:0,40,188	0/1:17,1:18:8.87:9,0,137	0/1:21,23:43:74.58:264,0,75	0/0:21,0:21:52.35:0,52,675	0/0:28,0:28:78.02:0,78,1015	0/1:29,0:29:99:206,0,176	0/0:7,0:7:2.41:0,2,82
chr10	45935912	.	T	TGC	2150.13	PASS	AB=0.838;AC=12;AF=0.214;AN=56;BaseQRankSum=12.565;DP=736;FS=7.763;HRun=0;HaplotypeScore=176.8937;InbreedingCoeff=-0.2561;MQ=54.95;MQ0=11;MQRankSum=-1.235;QD=6.21;ReadPosRankSum=10.768;VQSLOD=1.1148;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:44,3:47:44.54:45,0,298	0/1:5,0:10:54.91:55,0,85	0/0:42,0:26:71.44:0,71,993	0/0:34,0:20:54.17:0,54,813	0/0:19,0:19:57.19:0,57,856	0/0:17,0:18:16.12:0,16,432	0/1:24,0:32:54.49:54,0,417	0/0:22,0:19:40.61:0,41,705	0/1:20,8:27:34.48:213,0,34	0/0:25,0:25:72.24:0,72,1057	0/0:19,0:19:45.09:0,45,614	0/1:21,16:37:60.93:454,0,61	0/1:22,11:33:99:264,0,121	0/1:18,8:26:85.53:281,0,86	0/0:30,0:30:90.22:0,90,1359	0/0:27,0:27:81.26:0,81,1275	0/0:35,0:35:96.30:0,96,1483	0/0:13,0:12:35.79:0,36,532	0/1:12,0:12:0.45:0,0,99	0/0:21,0:21:2.99:0,3,23	0/1:38,0:38:1.74:2,0,185	0/0:18,0:18:40.45:0,40,238	0/0:18,1:19:27.81:0,28,218	0/1:23,23:45:45.42:543,0,45	0/0:21,0:21:61.34:0,61,827	0/0:27,0:26:75.03:0,75,1048	0/1:28,0:28:99:367,0,120	0/1:7,0:7:13.56:14,0,75
chr10	45935944	.	A	AGTGTGT	5951.43	PASS	AB=0.994;AC=24;AF=0.429;AN=56;BaseQRankSum=-8.475;DP=784;FS=1.352;HRun=0;HaplotypeScore=275.2510;InbreedingCoeff=0.4665;MQ=49.23;MQ0=31;MQRankSum=-0.366;QD=17.25;ReadPosRankSum=-0.614;VQSLOD=4.1025;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:33:25.64:0,26,332	0/0:14,0:14:20.69:0,21,242	0/0:57,0:14:0.18:0,0,20	0/0:79,0:27:3.17:0,3,85	1/1:19,0:19:18.04:336,18,0	0/0:13,0:13:6.30:0,6,188	0/1:28,0:27:83.39:83,0,252	1/1:22,0:20:25.39:333,25,0	0/0:31,0:30:35.32:0,35,477	1/1:28,0:28:47.48:793,47,0	1/1:16,0:16:14.91:217,15,0	0/0:34,0:34:45.69:0,46,599	0/0:26,0:27:42.32:0,42,656	0/0:28,0:29:29.20:0,29,475	1/1:32,0:31:26.30:734,26,0	1/1:34,0:34:3.33:375,3,0	0/0:39,0:39:99:0,99,1981	1/1:14,0:14:33.09:705,33,0	0/1:14,0:13:19.39:19,0,54	0/1:14,0:14:17.28:17,0,160	0/1:40,0:38:99:127,0,208	0/0:15,0:15:18.01:0,18,250	0/0:18,0:18:15.98:0,16,197	0/0:50,0:50:23:0,23,248	1/1:27,0:27:36.10:729,36,0	1/1:25,4:30:66.21:1401,66,0	0/1:22,0:22:66.38:66,0,151	0/1:3,0:2:13.97:14,0,33
chr10	45935965	.	GTGTT	G	4046.64	PASS	AB=1.000;AC=35;AF=0.625;AN=56;BaseQRankSum=6.074;DP=835;FS=2.167;HRun=0;HaplotypeScore=241.9759;InbreedingCoeff=-0.0637;MQ=48.58;MQ0=31;MQRankSum=-1.958;QD=6.88;ReadPosRankSum=0.553;VQSLOD=2.7353;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:29:23.16:150,0,23	0/1:10,0:10:66.53:109,0,67	0/0:83,0:29:46.18:0,46,611	0/0:86,0:36:21.64:0,22,625	0/1:19,0:19:24.98:25,0,123	1/1:9,7:16:30.05:472,30,0	1/1:22,11:33:38.58:867,39,0	0/1:29,0:27:35.18:35,0,690	1/1:29,0:29:40.59:303,41,0	0/1:28,0:27:17.83:18,0,265	0/1:12,0:12:32.92:33,0,73	0/1:31,0:31:59.13:266,0,59	1/1:28,0:28:8.76:267,9,0	1/1:32,0:32:2.40:251,2,0	0/1:33,0:33:99:159,0,332	0/1:29,0:29:90.37:90,0,269	0/0:49,0:49:99:0,123,2933	0/1:17,0:17:75.09:75,0,117	0/1:17,0:16:4.43:86,0,4	1/1:14,1:15:4.21:77,4,0	1/1:43,3:44:20.02:269,20,0	1/1:19,0:19:16.83:104,17,0	1/1:22,0:22:17.80:128,18,0	0/1:49,0:49:23.22:127,0,23	0/1:25,0:25:17.54:18,0,196	0/0:29,0:29:8.95:0,9,680	1/1:17,0:17:4.23:61,4,0	1/1:2,1:2:3.01:56,3,0
chr10	45935967	.	GTT	G	4796.97	PASS	AB=0.983;AC=36;AF=0.643;AN=56;BaseQRankSum=6.368;DP=839;FS=7.663;HRun=3;HaplotypeScore=221.2498;InbreedingCoeff=-0.0946;MQ=48.89;MQ0=28;MQRankSum=-3.481;QD=7.72;ReadPosRankSum=1.741;VQSLOD=1.0047;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:29:28.12:53,0,28	0/1:10,0:10:50.59:59,0,51	0/0:83,0:29:47.03:0,47,616	0/0:87,0:38:46.91:0,47,601	0/1:17,0:17:7.36:35,0,7	1/1:15,0:15:28.76:198,29,0	1/1:32,0:32:59.20:415,59,0	0/1:31,0:29:99:110,0,542	1/1:29,0:29:29.74:149,30,0	0/1:28,0:27:44.50:152,0,45	0/1:12,0:12:11.38:35,0,11	0/1:31,0:31:62.95:120,0,63	0/1:29,0:29:21.68:95,0,22	1/1:32,0:32:6.77:107,7,0	0/1:37,0:37:30.94:267,0,31	0/1:28,0:28:14.91:158,0,15	0/0:48,0:48:99:0,123,2155	0/1:18,1:19:5.82:189,0,6	1/1:12,4:15:12.99:295,13,0	1/1:4,11:15:36.08:488,36,0	1/1:28,18:44:77.77:898,78,0	1/1:19,0:19:8.39:28,8,0	1/1:22,0:22:13.61:58,14,0	0/1:47,0:47:25.59:54,0,26	0/1:25,0:25:18.83:60,0,19	0/1:23,7:30:99:272,0,365	1/1:11,8:19:38.99:458,39,0	1/1:3,0:2:5.95:42,6,0
chr10	45935973	.	GTGTTTGTGGTTT	G	14113.98	PASS	AB=0.998;AC=33;AF=0.589;AN=56;BaseQRankSum=0.198;DP=808;FS=8.128;HRun=0;HaplotypeScore=277.9598;InbreedingCoeff=-0.1275;MQ=49.53;MQ0=25;MQRankSum=-6.205;QD=23.56;ReadPosRankSum=-1.145;VQSLOD=2.5548;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:0,29:29:27.09:931,27,0	1/1:1,7:8:18.06:604,18,0	0/0:79,0:30:82.62:0,83,1552	0/0:78,0:38:57.51:0,58,1892	0/1:17,0:17:99:287,0,262	0/1:15,0:15:41.01:154,0,41	0/1:29,0:30:66.24:66,0,227	0/1:28,0:26:99:251,0,791	1/1:0,25:28:48.16:1621,48,0	0/1:31,0:30:99:290,0,672	0/1:11,0:11:51.96:52,0,165	1/1:1,23:27:45.15:1569,45,0	1/1:1,24:28:51.17:1685,51,0	1/1:5,22:29:45.15:1474,45,0	0/1:35,0:35:99:518,0,984	0/1:26,0:26:99:402,0,754	0/0:48,0:48:99:0,141,6479	0/1:18,0:18:99:376,0,438	0/1:18,0:16:48.42:209,0,48	0/1:16,0:16:99:200,0,128	0/1:46,0:44:99:518,0,469	1/1:0,18:19:19.84:696,20,0	1/1:0,22:22:21.54:720,22,0	1/1:3,39:43:21.07:664,21,0	0/1:25,0:25:99:342,0,542	0/1:31,0:31:99:197,0,959	0/1:19,0:19:99:289,0,240	0/0:3,0:2:5.87:0,6,36
chr10	45935978	.	TGTG	T	1567.02	PASS	AB=0.975;AC=18;AF=0.321;AN=56;BaseQRankSum=11.752;DP=786;FS=21.093;HRun=0;HaplotypeScore=225.6355;InbreedingCoeff=0.7388;MQ=47.30;MQ0=22;MQRankSum=-6.428;QD=6.10;ReadPosRankSum=7.848;VQSLOD=0.6378;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:29:22.27:175,22,0	1/1:9,0:8:11.20:79,11,0	0/0:75,0:33:83.72:0,84,1840	0/0:74,0:37:98.98:0,99,1879	0/0:20,0:20:7.73:0,8,80	0/0:16,0:16:6.04:0,6,130	0/0:31,0:31:33.39:0,33,358	0/0:27,0:25:64.48:0,64,747	1/1:26,2:28:37.09:281,37,0	0/0:29,0:28:42.68:0,43,380	0/0:10,0:10:16.15:0,16,108	1/1:25,2:27:39.25:309,39,0	1/1:27,0:27:36.85:260,37,0	1/1:28,1:29:20.92:263,21,0	0/0:31,0:31:63.64:0,64,389	0/1:23,0:23:33.11:33,0,82	0/0:47,0:47:99:0,135,2947	0/0:19,0:19:9.33:0,9,273	0/0:17,0:14:30.05:0,30,263	0/0:17,0:17:25.05:0,25,221	0/0:43,0:42:56.83:0,57,822	0/1:18,0:19:19.36:105,0,19	1/1:23,0:23:3.89:130,4,0	1/1:43,0:42:13.31:131,13,0	0/0:23,0:23:38.89:0,39,198	0/0:31,0:31:19.64:0,20,471	0/0:18,0:18:32.67:0,33,359	0/0:1,0:1:3.01:0,3,40
chr10	45935981	.	GGTTT	G	10138.42	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=10.514;DP=765;FS=35.141;HRun=0;HaplotypeScore=198.8833;InbreedingCoeff=0.8953;MQ=48.09;MQ0=21;MQRankSum=-7.531;QD=17.69;ReadPosRankSum=1.433;VQSLOD=3.0473;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:29:24.08:323,24,0	1/1:9,0:8:15.05:216,15,0	0/0:75,0:34:23.83:0,24,728	0/0:71,0:37:40.59:0,41,1219	1/1:10,9:19:28.92:381,29,0	1/1:4,0:17:18.15:147,18,0	1/1:11,0:28:10.35:65,10,0	1/1:10,19:27:48.12:719,48,0	1/1:27,0:27:39.13:538,39,0	1/1:13,15:28:50.84:741,51,0	1/1:5,5:10:11.96:111,12,0	1/1:25,0:25:36.12:475,36,0	1/1:25,0:25:39.13:515,39,0	1/1:27,2:29:36.12:498,36,0	1/1:14,15:29:28.37:557,28,0	1/1:15,6:21:48.34:648,48,0	0/0:46,0:46:75.55:0,76,2503	1/1:8,9:18:16:404,16,0	1/1:10,9:16:30.02:419,30,0	1/1:6,10:17:30.99:472,31,0	1/1:21,22:42:39.12:581,39,0	1/1:19,0:19:17.57:243,18,0	1/1:23,0:23:21.06:251,21,0	1/1:39,2:40:18.06:251,18,0	1/1:11,9:20:32.38:440,32,0	1/1:10,14:29:48.15:743,48,0	1/1:6,10:16:21.07:349,21,0	1/1:2,0:2:3.01:50,3,0
chr10	45935985	.	T	TGTG	3605.56	PASS	AB=0.977;AC=23;AF=0.411;AN=56;BaseQRankSum=-0.103;DP=758;FS=1.887;HRun=0;HaplotypeScore=222.4091;InbreedingCoeff=-0.2193;MQ=48.76;MQ0=16;MQRankSum=-3.586;QD=7.69;ReadPosRankSum=-8.655;VQSLOD=0.6619;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:29:24.75:25,0,97	0/0:9,0:8:15.10:0,15,93	0/0:72,0:37:75.86:0,76,1417	0/0:67,0:38:93.86:0,94,1489	1/1:15,4:19:21.07:439,21,0	0/0:17,0:17:20.03:0,20,205	0/0:25,0:25:15.42:0,15,273	0/1:30,0:29:99:147,0,450	0/1:28,0:28:9.22:9,0,130	0/1:26,2:28:72.13:340,0,72	1/1:8,2:10:11.97:175,12,0	0/0:26,0:26:38.18:0,38,198	0/0:26,0:26:37.98:0,38,182	0/1:27,0:29:17.33:17,0,160	0/1:27,3:31:9.83:458,0,10	0/1:19,1:20:3.73:435,0,4	0/0:45,0:45:99:0,126,2048	0/1:16,2:18:99:169,0,116	0/1:19,0:16:99:178,0,120	0/1:13,0:13:69.13:69,0,169	0/1:46,0:45:99:155,0,367	0/1:20,0:20:33.08:33,0,45	0/1:23,0:23:13.67:14,0,73	0/1:41,0:40:29.21:29,0,88	1/1:16,4:20:35.67:638,36,0	0/1:26,2:28:99:168,0,166	0/1:15,0:15:64.45:64,0,215	0/1:2,0:2:43.85:44,0,44
chr10	45937037	.	C	CAG	4846.09	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=14.275;DP=803;FS=1.344;HRun=0;HaplotypeScore=141.0903;InbreedingCoeff=0.9990;MQ=79.36;MQ0=0;MQRankSum=-4.582;QD=46.15;ReadPosRankSum=1.650;VQSLOD=5.4929;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:73,0:73:99:0,211,3391	0/0:8,0:8:21.04:0,21,316	0/0:19,0:19:54.15:0,54,789	0/0:21,0:21:43.15:0,43,668	0/0:15,0:15:42.13:0,42,654	0/0:27,0:27:78.25:0,78,1245	0/0:20,0:20:60.19:0,60,954	0/0:25,0:25:66.22:0,66,1060	0/0:34,0:34:99:0,99,1613	0/0:40,0:40:99:0,114,1836	0/0:20,0:20:57.14:0,57,876	0/0:43,0:43:99:0,126,2032	0/0:34,0:34:99:0,102,1630	0/0:42,0:42:99:0,126,2026	0/0:38,0:38:99:0,114,1787	0/0:27,0:27:81.28:0,81,1322	0/0:35,0:35:99:0,102,1612	0/0:27,0:27:81.28:0,81,1322	1/1:0,16:17:48.16:910,48,0	1/1:0,19:19:54.19:1011,54,0	1/1:1,24:27:54.19:1013,54,0	0/0:28,0:28:81.28:0,81,1312	0/0:23,0:23:69.22:0,69,1093	0/0:45,0:45:99:0,135,2168	0/0:25,0:25:75.26:0,75,1213	0/0:29,0:29:87.30:0,87,1414	1/1:1,24:26:69.24:1287,69,0	1/1:1,13:16:33.11:624,33,0
chr10	45937932	.	T	TTGGTGCAGAC	71638.41	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-7.447;DP=730;FS=0.000;HRun=0;HaplotypeScore=160.4644;InbreedingCoeff=0.9950;MQ=76.53;MQ0=0;MQRankSum=-13.114;QD=109.04;ReadPosRankSum=3.648;VQSLOD=5.3633;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,15:27:45.15:2378,45,0	1/1:3,7:12:27.09:1358,27,0	0/0:27,0:27:54.62:0,55,2272	0/0:25,0:25:69.19:0,69,1988	1/1:2,15:25:48.05:2243,48,0	1/1:5,17:26:57.20:2952,57,0	1/1:6,11:23:48.10:2295,48,0	1/1:15,12:34:93.31:4393,93,0	1/1:8,24:34:81.28:4233,81,0	1/1:5,20:38:99:4807,111,0	1/1:0,18:22:54.19:2858,54,0	1/1:4,17:22:60.21:3170,60,0	1/1:6,18:27:69.24:3574,69,0	1/1:6,21:30:72.25:3798,72,0	1/1:3,26:42:84.29:4396,84,0	1/1:6,12:27:42.14:2199,42,0	0/0:21,0:21:63.22:0,63,2058	1/1:2,4:15:18.06:954,18,0	1/1:4,3:19:54.11:1617,54,0	1/1:10,19:33:78.20:3847,78,0	1/1:5,10:21:30.10:1486,30,0	1/1:4,16:28:54.18:2810,54,0	1/1:3,13:24:45.11:2195,45,0	1/1:5,14:21:32.95:1689,33,0	1/1:4,18:23:66.23:3456,66,0	1/1:7,21:33:93.28:4486,93,0	1/1:13,14:37:69.24:3314,69,0	1/1:0,10:13:21.07:1130,21,0
chr10	45938653	.	G	GA	5447.87	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=0.545;DP=544;FS=1.657;HRun=10;HaplotypeScore=86.5390;InbreedingCoeff=0.9798;MQ=67.62;MQ0=0;MQRankSum=-0.746;QD=17.69;ReadPosRankSum=2.144;VQSLOD=5.4324;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,25:30:62.86:636,63,0	1/1:1,0:8:14.35:76,14,0	0/0:9,0:9:17.93:0,18,140	0/0:17,0:13:14.94:0,15,118	0/0:25,0:26:70.92:0,71,569	1/1:5,13:19:20.31:405,20,0	1/1:3,26:30:69.01:718,69,0	0/0:27,0:28:64.22:0,64,519	1/1:3,11:14:24.04:256,24,0	0/0:8,0:8:14.96:0,15,123	0/0:21,0:21:51.78:0,52,414	1/1:6,15:21:36.09:383,36,0	1/1:3,21:24:40.15:408,40,0	1/1:2,14:16:14.45:359,14,0	1/1:4,0:24:48.40:243,48,0	0/0:11,0:11:29.96:0,30,246	0/0:30,0:30:67.97:0,68,565	0/0:29,0:29:77.87:0,78,640	1/1:3,1:10:11.83:58,12,0	1/1:8,0:23:43.06:231,43,0	1/1:0,1:9:22.89:132,23,0	1/1:0,16:16:39.06:403,39,0	1/1:4,16:20:39.06:403,39,0	1/1:4,21:25:36.62:612,37,0	0/0:18,0:18:41.93:0,42,344	0/0:22,0:23:24.21:0,24,349	1/1:7,1:19:22.99:123,23,0	0/0:16,0:16:13.98:0,14,224
chr10	45939643	.	G	GC	19925.16	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-8.479;DP=606;FS=1.027;HRun=1;HaplotypeScore=61.2895;InbreedingCoeff=0.9961;MQ=65.93;MQ0=1;MQRankSum=-1.313;QD=37.10;ReadPosRankSum=3.506;VQSLOD=5.2292;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,44:44:99:1841,123,0	1/1:1,7:8:18.06:270,18,0	0/0:16,0:15:45.07:0,45,538	0/0:15,1:14:39.04:0,39,440	1/1:2,20:22:41.99:552,42,0	1/1:0,14:14:42.14:628,42,0	1/1:0,26:23:54.14:781,54,0	1/1:1,19:17:45.15:648,45,0	1/1:1,22:23:63.21:944,63,0	1/1:0,16:15:35.85:513,36,0	1/1:0,13:13:30.10:449,30,0	1/1:2,23:25:75.23:1083,75,0	1/1:0,13:13:36.12:538,36,0	1/1:2,16:18:48.16:715,48,0	1/1:1,20:21:48.16:718,48,0	1/1:1,22:23:57.19:854,57,0	0/0:37,0:37:99:0,111,1425	1/1:2,35:36:90.30:1339,90,0	1/1:3,17:19:51.17:758,51,0	1/1:0,15:15:33.11:494,33,0	1/1:2,45:47:99:1888,126,0	1/1:0,19:18:41.98:626,42,0	1/1:0,12:12:33.11:494,33,0	1/1:1,30:31:75.25:1122,75,0	1/1:0,12:12:33.11:493,33,0	1/1:0,26:25:75.19:1055,75,0	1/1:2,19:21:48.16:719,48,0	1/1:0,9:9:27.09:404,27,0
chr10	45941085	.	TA	T	1767.23	PASS	AB=0.605;AC=29;AF=0.518;AN=56;BaseQRankSum=-0.841;DP=424;FS=1.145;HRun=15;HaplotypeScore=47.7362;InbreedingCoeff=0.6570;MQ=50.94;MQ0=28;MQRankSum=0.787;QD=6.38;ReadPosRankSum=2.277;VQSLOD=2.1673;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:29:40.06:0,40,214	1/1:2,0:4:4.07:12,4,0	0/0:13,0:1:1.55:0,2,4	0/0:10,0:2:2.63:0,3,26	0/1:9,20:30:43.91:151,0,44	0/0:6,0:20:31.71:0,32,187	0/0:3,0:6:5.72:0,6,29	1/1:10,0:20:6.09:32,6,0	0/0:1,0:6:8.52:0,9,42	1/1:4,12:16:32.07:201,32,0	0/1:9,10:20:2.62:112,0,3	0/0:2,0:14:21.28:0,21,101	0/0:6,0:7:8.83:0,9,63	1/1:4,8:12:20.67:134,21,0	1/1:1,0:12:16.28:47,16,0	1/1:0,9:9:14.78:96,15,0	0/0:18,1:17:10.59:0,11,206	1/1:10,19:30:28.04:293,28,0	1/1:3,0:18:25.97:78,26,0	1/1:3,0:12:11.17:32,11,0	1/1:1,0:8:12.21:35,12,0	0/0:1,0:6:7.04:0,7,36	0/0:1,0:3:5.68:0,6,28	0/0:6,0:6:5.84:0,6,41	1/1:4,13:17:28.54:179,29,0	1/1:8,16:24:46.22:291,46,0	0/1:5,0:18:2.16:39,0,2	1/1:5,12:15:35.38:231,35,0
chr10	45945764	.	TGCATGC	T	1977.33	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=4.647;DP=1137;FS=0.557;HRun=0;HaplotypeScore=348.4598;InbreedingCoeff=0.6124;MQ=42.64;MQ0=7;MQRankSum=-5.535;QD=34.69;ReadPosRankSum=-3.713;VQSLOD=2.1462;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,1:35:24.92:0,25,532	0/0:22,0:22:21.19:0,21,547	0/0:54,0:27:61.56:0,62,2054	0/0:51,0:30:71.99:0,72,1844	0/0:43,0:43:25.64:0,26,634	0/0:36,0:36:22.23:0,22,678	0/0:32,0:31:21.04:0,21,494	1/1:1,39:36:99:2071,102,0	0/0:37,0:36:13.89:0,14,309	0/0:72,0:72:99:0,121,5126	0/0:20,0:20:17.66:0,18,559	0/0:45,0:45:47.52:0,48,1207	0/0:60,0:60:53.87:0,54,1498	0/0:51,0:51:40.69:0,41,1343	0/0:59,0:59:16.08:0,16,593	0/0:59,0:59:32.60:0,33,1000	0/0:19,0:19:48.60:0,49,1696	0/0:22,0:22:28.32:0,28,1156	0/0:17,0:17:42.39:0,42,1403	0/0:37,0:37:13.46:0,13,435	0/0:63,0:62:88.04:0,88,2455	0/0:42,0:42:13.67:0,14,494	0/0:25,0:25:8.58:0,9,289	0/0:29,0:29:17.13:0,17,466	0/0:38,0:38:15.85:0,16,451	0/0:66,0:66:99:0,119,5190	0/0:46,0:45:53.89:0,54,1632	0/1:16,0:16:5.84:6,0,1013
chr10	45945774	.	CACAT	C	1865.23	PASS	AB=1.000;AC=18;AF=0.333;AN=54;BaseQRankSum=0.230;DP=1114;FS=2.034;HRun=0;HaplotypeScore=321.9991;InbreedingCoeff=-0.0342;MQ=39.39;MQ0=7;MQRankSum=2.735;QD=3.23;ReadPosRankSum=-0.382;VQSLOD=1.8711;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:34,0:34:7.27:65,0,7	0/1:20,0:20:5.86:6,0,18	0/0:54,0:26:68.88:0,69,1333	0/0:58,0:31:51.69:0,52,1354	./.	0/1:30,0:30:0:0,0,0	0/1:29,0:28:0.26:0,0,1	1/1:25,23:41:24.92:885,25,0	0/0:34,0:33:2.99:0,3,25	0/1:70,0:70:99:307,0,1050	0/1:23,0:23:1.25:91,0,1	0/1:36,0:36:28.70:29,0,38	0/1:51,0:51:63.65:64,0,165	0/0:48,0:48:17.96:0,18,146	0/0:58,0:58:3:0,3,25	0/0:58,0:58:8.09:0,8,121	0/0:21,0:21:48.59:0,49,1154	0/1:25,0:25:99:148,0,237	0/1:16,0:16:53.50:53,0,137	0/0:39,0:39:4.81:0,5,29	0/1:60,0:59:72.96:73,0,151	0/0:43,0:43:1.87:0,2,24	0/1:25,0:25:0:0,0,0	1/1:32,0:32:11.34:97,11,0	0/0:38,0:38:5.85:0,6,48	0/1:61,0:61:99:122,0,1316	0/0:47,0:47:11.04:0,11,602	0/1:17,0:17:72.01:72,0,135
chr10	45945778	.	T	TACATACAC	21088.57	PASS	AB=0.517;AC=42;AF=0.750;AN=56;BaseQRankSum=-6.982;DP=1247;FS=40.258;HRun=0;HaplotypeScore=315.7491;InbreedingCoeff=0.6118;MQ=41.57;MQ0=5;MQRankSum=-0.355;QD=19.64;ReadPosRankSum=3.056;VQSLOD=2.5654;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:22,13:36:7.23:172,7,0	1/1:2,19:23:2.11:123,2,0	0/0:51,0:25:60.11:0,60,1168	0/0:53,0:27:67.40:0,67,1269	1/1:3,33:42:0.26:1,0,0	0/1:5,40:47:0.12:0,0,0	0/1:2,24:29:0.14:0,0,1	1/1:51,0:45:88.88:1037,89,0	1/1:2,39:43:2.74:12,3,0	1/1:4,72:82:99:6102,183,0	1/1:10,13:23:21.05:320,21,0	1/1:3,37:45:6.02:183,6,0	1/1:2,51:57:24.08:993,24,0	0/1:7,45:57:0.28:0,0,0	0/1:3,59:71:0:0,0,0	1/1:5,55:66:9.03:326,9,0	0/0:21,0:21:38.69:0,39,1104	1/1:21,6:27:28.95:1263,29,0	1/1:2,15:24:63.11:1763,63,0	1/1:1,40:45:2.30:36,2,0	1/1:47,11:57:22.44:375,22,0	0/1:2,42:48:0.42:2,0,0	0/1:0,27:31:0.22:1,0,0	1/1:18,13:31:14.96:336,15,0	0/0:2,39:46:2.29:0,2,10	1/1:9,51:66:99:5422,153,0	1/1:3,47:54:47.72:2056,48,0	1/1:9,5:14:24.04:563,24,0
chr10	45945780	.	CATAT	C	2626.15	PASS	AB=0.980;AC=18;AF=0.321;AN=56;BaseQRankSum=-0.059;DP=1208;FS=0.000;HRun=0;HaplotypeScore=325.2108;InbreedingCoeff=-0.2442;MQ=40.40;MQ0=4;MQRankSum=0.118;QD=3.86;ReadPosRankSum=-2.222;VQSLOD=1.4558;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:34,3:37:0.78:142,1,0	1/1:22,0:22:2.88:30,3,0	0/0:52,0:27:65.89:0,66,1324	0/0:54,0:26:65:0,65,1313	0/0:37,0:37:5.22:0,5,47	0/0:41,0:41:5.99:0,6,48	0/0:28,0:27:5.59:0,6,50	0/1:49,0:42:99:371,0,135	0/0:43,0:42:5.98:0,6,48	0/1:78,0:78:99:654,0,1221	0/1:23,1:24:43.99:179,0,44	0/1:47,0:47:58.80:59,0,60	0/1:55,0:55:99:126,0,163	0/0:56,0:56:11.69:0,12,87	0/0:70,0:70:5.79:0,6,50	0/1:65,0:65:17.11:17,0,128	0/0:21,0:21:48.61:0,49,1184	0/1:27,0:27:99:321,0,213	0/1:23,0:23:99:113,0,161	0/0:45,0:45:10.86:0,11,83	0/1:50,4:53:52.46:166,0,52	0/0:48,0:48:4.66:0,5,49	0/0:33,0:33:8.60:0,9,72	0/1:26,3:29:11.01:133,0,11	0/1:45,0:45:0:0,0,0	0/1:60,0:60:99:353,0,1140	0/1:53,0:52:9.66:10,0,607	0/1:11,1:12:99:102,0,132
chr10	45945951	.	CAT	C	30975.51	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=1.512;DP=1194;FS=1.010;HRun=0;HaplotypeScore=228.2038;InbreedingCoeff=0.8643;MQ=57.38;MQ0=14;MQRankSum=1.381;QD=26.98;ReadPosRankSum=2.692;VQSLOD=5.4770;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,25:30:72.21:908,72,0	1/1:2,7:9:15.05:193,15,0	0/0:12,0:7:1.39:0,1,44	0/0:19,1:9:5.75:0,6,50	1/1:6,35:41:81.26:1040,81,0	1/1:5,44:48:99:1394,111,0	1/1:2,32:34:69.22:886,69,0	1/1:8,34:42:99:1152,99,0	1/1:4,61:64:99:1641,129,0	1/1:10,71:80:99:2589,214,0	1/1:2,19:20:48.16:616,48,0	1/1:7,44:49:90.29:1154,90,0	1/1:8,54:61:99:1422,111,0	1/1:7,61:68:99:1810,141,0	1/1:5,67:71:99:1539,120,0	1/1:9,62:70:99:1655,129,0	0/0:14,0:14:30.05:0,30,448	1/1:10,19:29:65:797,65,0	1/1:6,14:20:42.10:522,42,0	1/1:3,37:38:54.18:694,54,0	1/1:22,61:82:99:2693,215,0	1/1:4,35:39:78.25:1002,78,0	1/1:4,32:36:84.27:1079,84,0	1/1:10,30:40:39.79:1050,40,0	1/1:1,22:23:57.19:732,57,0	1/1:7,71:77:99:2439,199,0	1/1:10,34:43:99:1314,105,0	1/1:2,18:20:51.17:655,51,0
chr10	45952758	.	A	AT	17238.30	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-9.718;DP=700;FS=1.706;HRun=8;HaplotypeScore=68.3376;InbreedingCoeff=0.9497;MQ=78.96;MQ0=1;MQRankSum=-3.351;QD=27.76;ReadPosRankSum=2.781;VQSLOD=5.3824;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,39:45:93.28:1073,93,0	1/1:4,6:10:15.04:173,15,0	0/0:25,0:25:21.18:0,21,308	0/0:20,0:17:5.74:0,6,186	1/1:1,20:21:60.11:676,60,0	1/1:3,26:29:69.20:794,69,0	1/1:1,27:28:75.22:862,75,0	1/1:3,29:32:87.25:994,87,0	1/1:2,18:20:51.07:571,51,0	1/1:3,30:33:90.24:1018,90,0	1/1:2,10:12:30.09:346,30,0	1/1:5,25:30:60.22:785,60,0	1/1:5,19:24:57.17:657,57,0	1/1:2,29:31:72.21:831,72,0	1/1:5,32:37:81.24:935,81,0	1/1:1,26:27:72.21:831,72,0	0/0:34,0:34:93.05:0,93,851	1/1:2,19:21:54.16:623,54,0	1/1:6,16:22:23.71:516,24,0	1/1:3,19:22:50.98:540,51,0	1/1:1,23:25:60.01:672,60,0	1/1:0,16:16:48.10:539,48,0	1/1:1,15:16:42.10:485,42,0	1/1:4,35:39:93.28:1074,93,0	1/1:1,19:20:54.16:623,54,0	1/1:4,16:20:20.65:478,21,0	1/1:3,19:23:60.18:692,60,0	1/1:2,16:18:39.12:450,39,0
chr10	45954534	.	AGTGCCCT	A	7941.47	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=13.748;DP=669;FS=0.398;HRun=0;HaplotypeScore=158.7136;InbreedingCoeff=0.9923;MQ=82.72;MQ0=0;MQRankSum=-14.993;QD=60.16;ReadPosRankSum=2.009;VQSLOD=4.8634;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,123,4929	1/1:1,6:7:14.91:343,15,0	0/0:16,0:16:45.14:0,45,1600	0/0:25,0:25:71.44:0,71,2370	0/0:23,0:23:66.21:0,66,2667	0/0:22,0:22:66.23:0,66,2752	0/0:23,0:23:69.22:0,69,2690	0/0:28,0:28:81.27:0,81,3058	0/0:21,0:21:63.22:0,63,2641	0/0:32,0:32:96.32:0,96,3802	0/0:19,0:19:54.19:0,54,2162	0/0:34,0:34:99:0,102,3891	0/0:26,0:26:75.26:0,75,2996	0/0:28,0:28:84.29:0,84,3334	1/1:0,37:37:87.30:2426,87,0	0/0:28,0:28:84.29:0,84,3360	0/0:33,0:33:99:0,99,4042	0/0:23,0:23:69.24:0,69,2801	1/1:0,17:17:51.13:1356,51,0	1/1:0,25:25:60.04:1643,60,0	1/1:0,22:22:14.61:417,15,0	0/0:15,0:15:45.14:0,45,1728	0/0:17,0:17:48.14:0,48,1876	0/0:26,0:26:78.25:0,78,3051	0/0:23,0:23:66.23:0,66,2690	0/0:27,0:27:81.28:0,81,3295	1/1:0,24:24:63.22:1757,63,0	0/0:7,0:7:21.05:0,21,740
chr10	45955744	.	AACAC	A	4678.25	PASS	AB=0.560;AC=17;AF=0.304;AN=56;BaseQRankSum=-2.154;DP=583;FS=5.431;HRun=0;HaplotypeScore=118.1411;InbreedingCoeff=0.7115;MQ=54.50;MQ0=23;MQRankSum=2.932;QD=26.43;ReadPosRankSum=5.889;VQSLOD=4.2488;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:19:6.48:0,6,63	0/0:7,0:6:9.50:0,9,131	0/0:54,0:24:28.23:0,28,376	0/0:50,0:23:8.09:0,8,272	1/1:5,15:23:42.13:640,42,0	0/0:20,0:18:9.65:0,10,51	0/0:18,0:14:6.27:0,6,106	0/0:31,0:31:45.08:0,45,552	0/0:13,0:13:11.99:0,12,120	1/1:6,20:28:47.20:875,47,0	1/1:12,3:17:23.98:313,24,0	0/0:28,0:26:10.98:0,11,136	0/0:15,0:13:12.04:0,12,175	1/1:3,8:12:24.03:338,24,0	0/0:11,0:22:9.49:0,9,122	1/1:4,14:21:37.66:547,38,0	0/0:8,0:25:48.35:0,48,803	1/1:3,16:18:30.10:486,30,0	0/0:14,0:13:17.89:0,18,233	0/0:9,0:11:3.01:0,3,52	0/0:2,0:4:6.02:0,6,104	0/0:18,0:17:2.99:0,3,33	0/0:12,0:10:2.99:0,3,24	0/0:12,0:14:3.01:0,3,52	1/1:5,13:19:35.86:563,36,0	1/1:8,13:23:11.78:554,12,0	0/0:13,0:22:3:0,3,27	0/1:3,8:14:4.93:363,0,5
chr10	45957764	.	CT	C	8508.79	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=14.951;DP=695;FS=0.000;HRun=9;HaplotypeScore=68.3366;InbreedingCoeff=0.9996;MQ=69.42;MQ0=0;MQRankSum=-1.170;QD=22.93;ReadPosRankSum=2.811;VQSLOD=5.6566;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:84.69:0,85,956	1/1:2,11:13:30.02:274,30,0	0/0:19,0:18:48.14:0,48,553	0/0:11,0:11:24.05:0,24,257	1/1:4,34:38:93.03:851,93,0	0/0:21,0:21:60.18:0,60,692	0/0:20,0:20:54.13:0,54,603	0/0:28,0:28:72.20:0,72,814	0/0:20,0:20:54.16:0,54,622	1/1:4,22:26:66.03:604,66,0	1/1:2,17:19:45.02:412,45,0	0/0:35,0:35:93.26:0,93,1055	0/0:24,0:24:69.19:0,69,785	1/1:1,22:23:57.03:521,57,0	1/1:1,29:30:72.04:659,72,0	1/1:4,29:33:87.04:796,87,0	0/0:38,0:37:99:0,102,1152	1/1:3,20:23:57.03:521,57,0	1/1:2,16:18:48.03:439,48,0	1/1:4,25:29:75.04:686,75,0	1/1:3,28:31:78.04:714,78,0	0/0:20,0:20:57.16:0,57,648	0/0:30,0:30:84.24:0,84,960	0/0:24,0:24:66.17:0,66,749	1/1:1,17:18:45.02:412,45,0	1/1:2,24:26:75.04:685,75,0	1/1:7,26:33:69.02:632,69,0	1/1:0,11:11:33.02:302,33,0
chr10	45958420	.	CGCAT	C	3711.96	PASS	AB=0.939;AC=38;AF=0.704;AN=54;BaseQRankSum=1.867;DP=484;FS=3.468;HRun=0;HaplotypeScore=166.0529;InbreedingCoeff=0.0923;MQ=52.04;MQ0=13;MQRankSum=-1.797;QD=10.11;ReadPosRankSum=-1.913;VQSLOD=2.6067;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:18,3:21:34.38:270,34,0	./.	0/0:32,0:15:5.06:0,5,347	0/0:43,0:18:41.42:0,41,675	1/1:8,2:10:5.53:40,6,0	1/1:9,0:9:0.98:39,1,0	0/1:18,0:18:12.19:86,0,12	0/1:12,0:12:7.14:7,0,376	1/1:13,2:15:11.68:194,12,0	1/1:11,4:15:18.55:302,19,0	1/1:6,1:7:4.67:124,5,0	1/1:6,8:14:10.54:293,11,0	1/1:11,6:16:6.05:260,6,0	1/1:14,5:19:31.47:302,31,0	0/1:16,0:16:2.37:129,0,2	1/1:11,3:14:16.84:166,17,0	0/0:37,0:36:99:0,105,2093	1/1:19,3:21:38.05:284,38,0	0/1:11,0:11:15.89:81,0,16	0/1:9,0:9:16.82:80,0,17	0/1:44,0:44:62.72:180,0,63	0/1:5,3:8:12.20:34,0,12	1/1:7,2:9:14.93:131,15,0	1/1:33,3:36:26.34:230,26,0	1/1:11,2:13:8.86:115,9,0	0/1:12,0:11:1.58:139,0,2	0/1:12,0:12:30.64:137,0,31	0/1:2,2:4:3.22:87,0,3
chr10	45958432	.	CGCACACGCACGCACGCACGCAT	C	9536.74	PASS	AB=1.000;AC=38;AF=0.704;AN=54;BaseQRankSum=8.394;DP=460;FS=0.517;HRun=0;HaplotypeScore=273.6051;InbreedingCoeff=0.5609;MQ=45.20;MQ0=13;MQRankSum=-2.193;QD=32.33;ReadPosRankSum=1.523;VQSLOD=3.0262;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:13,3:16:20.31:574,20,0	./.	0/0:27,0:9:17.72:0,18,245	0/0:35,0:13:24.08:0,24,613	1/1:6,2:8:3.11:9,3,0	1/1:10,0:10:14.93:146,15,0	0/1:18,0:18:6.54:114,0,7	0/0:11,0:11:21.01:0,21,421	1/1:15,2:17:23.15:604,23,0	1/1:7,4:11:15.68:660,16,0	1/1:5,1:6:11.38:250,11,0	1/1:19,8:27:45.89:1492,46,0	1/1:9,6:15:24.82:1037,25,0	1/1:11,5:16:23.29:899,23,0	0/1:17,0:17:51.25:188,0,51	1/1:17,3:20:22.68:619,23,0	0/0:39,0:38:99:0,108,6691	1/1:20,3:22:7.33:704,7,0	0/0:9,0:8:11.91:0,12,141	0/1:8,0:8:14.94:264,0,15	0/0:36,0:36:31.75:0,32,286	1/1:6,3:9:9:279,9,0	1/1:9,2:11:8.64:360,9,0	1/1:24,3:27:13.48:95,13,0	1/1:12,2:14:11.79:360,12,0	1/1:11,0:9:9.28:259,9,0	0/1:8,0:8:99:296,0,108	1/1:1,2:3:6.02:327,6,0
chr10	45958433	.	GCA	G	1837.88	PASS	AB=0.933;AC=33;AF=0.611;AN=54;BaseQRankSum=7.455;DP=446;FS=1.072;HRun=0;HaplotypeScore=182.6715;InbreedingCoeff=0.3589;MQ=44.83;MQ0=13;MQRankSum=-1.886;QD=6.63;ReadPosRankSum=1.204;VQSLOD=3.1808;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:15:21.64:128,22,0	./.	0/0:26,0:9:0.33:0,0,137	0/0:35,0:13:24.08:0,24,381	0/0:8,0:8:1.87:0,2,9	1/1:9,1:10:14.95:147,15,0	0/1:16,0:16:7.39:117,0,7	0/0:10,0:10:20.64:0,21,256	1/1:15,2:17:1.95:121,2,0	0/1:10,0:10:41.92:42,0,55	1/1:6,0:6:2.68:90,3,0	1/1:24,3:27:15.89:272,16,0	1/1:15,0:15:26.32:165,26,0	1/1:9,7:16:13.48:150,13,0	0/1:16,0:16:1.51:2,0,97	1/1:20,0:20:13.62:147,14,0	0/0:38,0:37:99:0,108,1866	0/1:15,7:21:84.80:207,0,85	0/0:9,0:8:11.99:0,12,170	0/1:8,0:8:4.91:5,0,66	0/0:36,0:36:31.81:0,32,358	1/1:9,0:9:8.85:68,9,0	1/1:10,1:11:8.42:72,8,0	1/1:23,2:25:13.18:91,13,0	1/1:12,1:13:9.67:55,10,0	0/1:7,3:8:17.77:97,0,18	0/1:8,0:8:6:6,0,122	1/1:3,0:3:5.81:32,6,0
chr10	45958726	.	CGTGTGT	C	3106.81	PASS	AB=0.822;AC=29;AF=0.537;AN=54;BaseQRankSum=6.766;DP=697;FS=36.792;HRun=0;HaplotypeScore=176.1262;InbreedingCoeff=0.0916;MQ=69.07;MQ0=12;MQRankSum=-7.428;QD=6.37;ReadPosRankSum=-1.693;VQSLOD=0.7490;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:32,3:36:19.09:187,19,0	0/0:4,0:6:6:0,6,61	./.	0/0:28,0:20:3.01:0,3,40	1/1:8,0:9:0.47:1,0,0	1/1:13,0:27:14.91:180,15,0	0/1:24,0:28:55.76:123,0,56	0/0:20,0:20:11.86:0,12,82	1/1:10,12:24:18.49:288,18,0	0/1:30,0:31:59.81:60,0,120	1/1:11,0:21:15.94:211,16,0	1/1:16,12:29:1.69:535,2,0	1/1:13,7:20:14.79:275,15,0	0/1:23,0:34:5.22:356,0,5	0/0:15,0:26:27.94:0,28,409	0/1:14,0:19:13.05:121,0,13	0/1:29,1:32:8.73:9,0,924	0/1:23,0:27:50.08:179,0,50	0/0:14,0:19:16.59:0,17,177	0/0:11,0:11:20.87:0,21,339	0/0:43,0:65:28.30:0,28,359	0/1:13,8:22:14.53:82,0,15	1/1:11,2:14:15.01:242,15,0	0/1:25,13:40:32.02:123,0,32	0/1:13,0:16:6.73:114,0,7	0/1:18,0:20:62.82:63,0,91	0/1:17,1:27:89.56:90,0,211	1/1:6,0:7:3.01:42,3,0
chr10	45958834	.	G	GT	5650.34	PASS	AB=0.992;AC=22;AF=0.393;AN=56;BaseQRankSum=-15.827;DP=652;FS=3.285;HRun=9;HaplotypeScore=96.7127;InbreedingCoeff=0.7536;MQ=69.43;MQ0=2;MQRankSum=-0.287;QD=16.38;ReadPosRankSum=-0.364;VQSLOD=4.8449;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:40,0:40:1.52:2,0,281	0/0:14,0:14:38.18:0,38,314	0/1:31,1:20:28.83:29,0,204	0/0:23,0:18:23.59:0,24,220	1/1:4,20:24:60.16:663,60,0	0/0:18,0:18:45.26:0,45,187	0/1:28,0:28:2.49:2,0,171	0/0:27,0:26:62.97:0,63,547	0/1:22,0:22:23.82:24,0,123	1/1:6,25:31:75.19:821,75,0	1/1:2,16:18:45:468,45,0	0/0:21,0:21:22.47:0,22,136	0/0:24,0:24:52.97:0,53,218	1/1:3,19:22:42.10:464,42,0	0/0:23,0:23:59.98:0,60,521	1/1:2,21:23:42.16:523,42,0	0/0:13,0:13:35.99:0,36,312	1/1:4,21:25:28.10:538,28,0	0/0:15,0:15:38.99:0,39,337	0/0:19,0:19:53.99:0,54,468	0/0:12,0:12:29.97:0,30,256	0/0:26,0:26:39.40:0,39,215	0/0:23,0:23:38.97:0,39,189	0/0:26,0:26:29.58:0,30,204	1/1:1,21:22:60.16:661,60,0	1/1:6,31:38:95.99:1016,96,0	0/0:23,0:22:66.06:0,66,557	1/1:2,18:20:19.07:439,19,0
chr10	45959592	.	TA	T	2351.74	PASS	AB=0.649;AC=17;AF=0.304;AN=56;BaseQRankSum=-3.981;DP=615;FS=20.417;HRun=13;HaplotypeScore=94.7607;InbreedingCoeff=0.8367;MQ=68.12;MQ0=3;MQRankSum=3.927;QD=12.25;ReadPosRankSum=4.815;VQSLOD=1.8294;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:30:67.76:0,68,426	0/0:4,0:5:14.86:0,15,131	0/0:25,0:14:17.97:0,18,90	0/0:23,0:16:5.15:0,5,57	1/1:7,26:33:26.40:486,26,0	0/0:9,0:20:43.16:0,43,247	0/0:7,0:20:48.72:0,49,270	0/0:25,2:27:1.24:0,1,332	0/0:15,0:22:40.05:0,40,226	1/1:7,24:31:59.49:437,59,0	1/1:6,18:25:46.70:334,47,0	0/0:10,0:19:24.69:0,25,237	0/0:8,0:16:32.99:0,33,167	1/1:3,13:16:32.81:241,33,0	0/0:20,1:22:32:0,32,455	0/1:11,13:24:22.76:183,0,23	0/0:23,3:26:9.36:0,9,564	1/1:4,7:11:17.82:131,18,0	0/0:20,1:22:8.82:0,9,295	0/0:25,1:27:18.13:0,18,365	0/0:19,0:19:33.04:0,33,316	0/0:15,0:26:55.18:0,55,347	0/0:17,0:23:52.18:0,52,326	0/0:10,0:17:34.41:0,34,213	1/1:5,12:18:17.74:203,18,0	1/1:6,16:22:21.52:321,22,0	0/0:29,2:31:30.90:0,31,584	1/1:2,10:12:29.80:219,30,0
chr10	45959629	.	C	CAA	4826.09	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-2.576;DP=610;FS=15.285;HRun=8;HaplotypeScore=92.9245;InbreedingCoeff=0.9881;MQ=68.39;MQ0=4;MQRankSum=-3.512;QD=31.75;ReadPosRankSum=2.017;VQSLOD=3.6575;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,18:22:48.12:734,48,0	0/0:8,0:8:21.06:0,21,233	0/0:28,0:17:24.81:0,25,334	0/0:31,0:17:9.83:0,10,271	0/0:35,0:35:96.22:0,96,1058	1/1:3,15:19:41.63:627,42,0	1/1:7,10:19:24.08:362,24,0	0/0:33,0:33:78.19:0,78,863	1/1:1,13:14:36.12:571,36,0	0/0:26,0:26:66.17:0,66,736	0/0:24,0:25:68.92:0,69,747	1/1:7,11:18:30.09:455,30,0	1/1:4,8:12:23.91:338,24,0	0/0:15,0:15:42.11:0,42,467	0/0:24,0:24:60.15:0,60,669	0/0:24,0:24:50.92:0,51,624	0/0:21,0:21:60.12:0,60,655	0/0:14,0:14:36.09:0,36,400	0/0:33,0:33:84.19:0,84,927	0/0:21,0:22:51.05:0,51,616	0/0:23,0:23:63.13:0,63,690	1/1:3,13:16:42.10:637,42,0	1/1:2,20:23:57.19:886,57,0	1/1:2,6:8:15.04:217,15,0	0/0:18,0:18:45.08:0,45,491	0/0:24,0:24:66.16:0,66,736	0/0:31,0:31:78.18:0,78,868	0/0:23,0:23:63.15:0,63,702
chr10	45960113	.	GGTGTGTGTGTGT	G	2615.49	PASS	AC=14;AF=0.269;AN=52;BaseQRankSum=7.222;DP=598;FS=10.470;HRun=0;HaplotypeScore=192.0080;InbreedingCoeff=0.8427;MQ=67.34;MQ0=7;MQRankSum=-7.183;QD=18.95;ReadPosRankSum=-0.754;VQSLOD=1.7190;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:19.49:0,19,821	0/0:10,0:11:15.05:0,15,571	0/0:32,0:15:0:0,0,0	0/0:20,0:12:0.89:0,1,2	1/1:16,4:20:11.99:259,12,0	0/0:20,0:25:18.53:0,19,565	0/0:19,0:23:27.08:0,27,778	0/0:14,0:13:3.62:0,4,11	0/0:22,0:22:26.04:0,26,1312	./.	1/1:10,3:15:9.03:270,9,0	0/0:19,0:23:18.04:0,18,639	0/0:22,0:22:27.51:0,28,1058	1/1:16,7:23:15.05:513,15,0	0/0:20,0:23:30.10:0,30,717	1/1:11,5:16:12.04:387,12,0	0/0:19,0:21:25.33:0,25,885	./.	0/0:18,0:18:19.29:0,19,423	0/0:16,0:20:15.05:0,15,444	0/0:41,0:41:12.03:0,12,189	0/0:15,0:26:11.17:0,11,552	0/0:17,0:17:24.08:0,24,1274	0/0:28,0:28:24.08:0,24,1132	1/1:15,7:22:12.04:410,12,0	1/1:21,9:31:27.07:765,27,0	0/0:17,0:19:23.42:0,23,492	1/1:8,1:11:6.02:186,6,0
chr10	45961980	.	CTAAAATTATAGGCCTG	C	1736.60	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.574;DP=605;FS=2.808;HRun=0;HaplotypeScore=260.4864;InbreedingCoeff=0.9828;MQ=83.03;MQ0=0;MQRankSum=-3.084;QD=59.88;ReadPosRankSum=-3.546;VQSLOD=2.5879;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:90.31:0,90,6324	0/0:6,0:6:18.06:0,18,1429	0/0:19,0:19:39.17:0,39,2196	0/0:20,0:20:43.96:0,44,1577	0/0:11,0:11:33.11:0,33,2219	0/0:30,0:30:87.30:0,87,6497	0/0:30,0:30:90.31:0,90,6427	1/1:7,22:29:66.21:1831,66,0	0/0:17,0:17:45.13:0,45,3046	0/0:30,0:30:90.30:0,90,6371	0/0:17,0:17:48.16:0,48,3553	0/0:13,0:13:39.13:0,39,2938	0/0:16,0:16:48.16:0,48,3626	0/0:22,0:22:63.22:0,63,4583	0/0:33,0:33:90.31:0,90,6697	0/0:30,0:30:90.31:0,90,6528	0/0:19,0:19:51.18:0,51,3868	0/0:6,0:6:18.06:0,18,1240	0/0:18,0:18:54.19:0,54,3277	0/0:37,0:37:99:0,111,7390	0/0:26,0:26:75.26:0,75,5663	0/0:21,0:21:60.18:0,60,4193	0/0:26,0:26:69.22:0,69,4709	0/0:25,0:25:75.25:0,75,5557	0/0:14,0:14:42.14:0,42,2833	0/0:30,0:30:87.30:0,87,6478	0/0:20,0:20:60.21:0,60,4242	0/0:9,0:9:27.09:0,27,2058
chr10	45962198	.	AT	A	728.50	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=1.461;DP=476;FS=12.490;HRun=2;HaplotypeScore=86.3884;InbreedingCoeff=0.8854;MQ=77.03;MQ0=2;MQRankSum=0.273;QD=6.81;ReadPosRankSum=-1.694;VQSLOD=-0.6859;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:38.97:0,39,471	0/0:5,0:5:11.39:0,11,119	0/0:36,0:20:38.25:0,38,330	0/0:30,0:17:23.30:0,23,170	1/1:17,0:17:17.78:111,18,0	0/0:20,0:20:57.11:0,57,668	0/0:19,0:19:45.15:0,45,609	0/0:33,0:33:68.50:0,68,854	0/0:17,0:17:48.11:0,48,596	1/1:10,0:10:15.81:130,16,0	1/1:12,0:12:21.48:153,21,0	0/0:10,0:10:30.02:0,30,330	0/0:13,0:13:36.09:0,36,450	1/1:8,1:9:13.01:67,13,0	0/0:22,0:22:59.84:0,60,708	0/1:13,0:13:29.01:52,0,29	0/0:24,0:24:72.15:0,72,991	1/1:11,0:11:11.18:32,11,0	0/0:15,0:15:42.09:0,42,491	0/0:23,0:23:66.18:0,66,854	0/0:21,0:21:49.75:0,50,628	0/0:11,0:11:24.05:0,24,272	0/0:14,0:14:41.90:0,42,508	0/0:10,0:10:24.08:0,24,326	1/1:8,1:9:18.67:139,19,0	1/1:17,1:18:32.42:181,32,0	0/0:24,0:24:68.54:0,69,845	1/1:7,1:8:10.26:68,10,0
chr10	45962210	.	CAA	C	2912.62	PASS	AB=0.622;AC=27;AF=0.482;AN=56;BaseQRankSum=1.805;DP=514;FS=6.844;HRun=10;HaplotypeScore=100.6594;InbreedingCoeff=0.7770;MQ=72.76;MQ0=2;MQRankSum=0.765;QD=12.77;ReadPosRankSum=4.665;VQSLOD=1.5930;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:38.56:0,39,291	1/1:1,3:4:8.95:90,9,0	0/0:45,0:21:5.83:0,6,400	0/0:28,0:15:20.25:0,20,192	1/1:12,11:23:1.69:114,2,0	0/0:22,0:23:33.10:0,33,261	0/0:21,0:21:43.53:0,44,422	0/0:24,0:35:37.93:0,38,187	0/0:16,0:16:33.95:0,34,304	0/0:7,0:7:0:0,0,0	1/1:5,2:7:5.98:67,6,0	0/0:9,0:9:19.11:0,19,120	0/0:13,0:13:26.42:0,26,252	1/1:5,5:10:1.46:75,1,0	1/1:4,17:21:42.02:452,42,0	0/1:9,14:23:20.97:21,0,36	0/0:28,0:28:77.06:0,77,1147	1/1:4,10:14:9:100,9,0	1/1:2,12:14:33.04:354,33,0	1/1:4,27:31:54.03:594,54,0	1/1:3,15:18:36.08:401,36,0	0/0:13,0:13:16.83:0,17,138	0/0:13,0:14:25.91:0,26,252	0/0:12,0:12:19.21:0,19,193	1/1:10,1:11:20.87:205,21,0	1/1:18,0:18:9.16:109,9,0	1/1:5,22:27:42.07:468,42,0	1/1:7,0:7:7.22:71,7,0
chr10	45962253	.	CGAATCCCCA	C	8259.47	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=9.142;DP=491;FS=1.943;HRun=0;HaplotypeScore=162.2622;InbreedingCoeff=0.9810;MQ=78.70;MQ0=0;MQRankSum=-14.512;QD=62.57;ReadPosRankSum=4.149;VQSLOD=4.9825;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,25:26:45.15:1308,45,0	0/0:4,0:4:8.82:0,9,236	0/0:16,0:16:32.27:0,32,902	0/0:16,0:15:38.94:0,39,1257	0/0:23,0:23:63.22:0,63,2849	1/1:3,13:16:36.12:1087,36,0	1/1:3,16:19:27.09:818,27,0	0/0:27,0:27:72.21:0,72,2996	1/1:2,6:8:14.96:454,15,0	0/0:22,0:22:63.22:0,63,2996	0/0:15,0:15:45.15:0,45,2066	1/1:0,6:6:18.06:545,18,0	1/1:3,17:20:51.18:1535,51,0	0/0:11,0:11:24.08:0,24,1087	0/0:19,0:19:48.16:0,48,2274	0/0:29,0:29:57.06:0,57,2680	0/0:26,0:26:75.23:0,75,3400	0/0:14,0:14:30.10:0,30,1437	0/0:17,0:17:51.18:0,51,2250	0/0:35,0:35:99:0,102,4366	0/0:19,0:19:48.16:0,48,2185	1/1:1,10:11:27.09:776,27,0	1/1:0,12:12:30.10:760,30,0	1/1:3,11:14:33.11:977,33,0	0/0:15,0:15:36.12:0,36,1726	0/0:22,0:22:66.22:0,66,3004	0/0:25,0:25:57.17:0,57,2401	0/0:4,0:4:12.04:0,12,563
chr10	45963296	.	T	TACAC	2344.74	PASS	AB=0.927;AC=32;AF=0.615;AN=52;BaseQRankSum=-3.636;DP=526;FS=3.562;HRun=0;HaplotypeScore=105.8204;InbreedingCoeff=0.3741;MQ=62.67;MQ0=6;MQRankSum=-0.683;QD=7.49;ReadPosRankSum=-0.861;VQSLOD=2.4986;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:34,0:34:15.05:265,15,0	1/1:6,5:12:2.85:70,3,0	./.	./.	1/1:19,1:22:3.01:70,3,0	0/0:11,0:20:6.01:0,6,56	0/0:15,0:20:12.01:0,12,112	1/1:21,0:21:5.96:44,6,0	0/0:11,0:13:3.01:0,3,47	1/1:13,0:13:12.26:163,12,0	1/1:9,2:12:6.02:116,6,0	1/1:15,0:15:21.39:413,21,0	0/1:13,0:13:32.88:186,0,33	1/1:18,0:18:14.71:163,15,0	1/1:8,7:15:3.01:70,3,0	1/1:7,5:15:5.52:139,6,0	0/1:15,3:21:37.17:100,0,37	1/1:11,3:20:6.02:134,6,0	0/0:12,0:13:9.01:0,9,84	0/0:9,0:12:8.36:0,8,59	0/0:38,0:37:2.69:0,3,8	0/0:18,0:25:3.01:0,3,46	1/1:7,4:13:3.01:70,3,0	1/1:15,7:29:8.50:95,8,0	0/1:11,1:13:12.86:219,0,13	1/1:20,0:20:15.25:187,15,0	0/0:8,0:10:4.73:0,5,54	0/1:5,0:6:3.37:3,0,22
chr10	45964577	.	TC	T	2184.32	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=4.020;DP=242;FS=0.545;HRun=6;HaplotypeScore=27.4974;InbreedingCoeff=0.9067;MQ=69.42;MQ0=0;MQRankSum=0.081;QD=23.74;ReadPosRankSum=3.403;VQSLOD=2.1688;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,18:21:38.69:561,39,0	0/0:5,0:4:9.03:0,9,118	0/0:9,0:4:9:0,9,97	0/0:9,1:6:3:0,3,25	0/0:9,0:9:21.06:0,21,262	1/1:0,3:3:9.02:97,9,0	1/1:2,6:8:12.03:126,12,0	0/0:12,0:12:27.09:0,27,355	1/1:0,8:8:21.05:225,21,0	0/0:6,0:6:18.06:0,18,237	0/0:10,0:10:30.10:0,30,395	1/1:1,12:13:33.08:354,33,0	1/1:0,9:9:24.06:258,24,0	0/0:5,0:5:12.04:0,12,158	0/0:8,0:8:24.08:0,24,308	0/0:8,0:8:24.06:0,24,295	0/0:7,0:7:15.04:0,15,186	0/0:9,0:9:21.07:0,21,272	0/0:4,0:4:9.03:0,9,118	0/0:10,0:10:30.10:0,30,394	0/0:7,0:7:18.06:0,18,237	1/1:0,5:5:15.04:161,15,0	1/1:1,12:13:33.08:354,33,0	1/1:2,10:12:24.06:255,24,0	0/0:8,0:8:24.08:0,24,314	0/0:8,0:8:18.06:0,18,237	0/0:11,0:11:33.09:0,33,417	0/0:4,0:4:9.03:0,9,118
chr10	45966020	.	T	TG	1149.12	PASS	AB=0.984;AC=7;AF=0.125;AN=56;BaseQRankSum=6.870;DP=588;FS=0.000;HRun=0;HaplotypeScore=92.8010;InbreedingCoeff=0.2678;MQ=47.09;MQ0=40;MQRankSum=-5.178;QD=7.71;ReadPosRankSum=4.778;VQSLOD=3.5384;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:47.22:0,47,370	0/1:12,0:11:1.31:127,0,1	0/0:34,0:4:11.96:0,12,97	0/0:28,0:6:3.81:0,4,34	0/0:24,0:22:62.64:0,63,528	0/0:20,0:18:53.82:0,54,437	0/0:9,0:9:26:0,26,212	0/0:22,0:16:39.97:0,40,325	0/0:4,0:4:12:0,12,105	0/0:34,0:32:92.48:0,92,746	0/0:24,0:24:51.32:0,51,510	0/0:25,0:23:49.36:0,49,402	0/0:18,0:17:47.61:0,48,381	0/0:13,0:13:33.67:0,34,253	0/1:21,0:21:33.74:34,0,52	0/0:22,0:19:52.05:0,52,423	0/0:26,0:26:69.01:0,69,519	0/0:16,0:15:35.89:0,36,297	0/1:32,0:28:24.90:309,0,25	0/1:35,2:36:12.41:377,0,12	1/1:11,1:10:18.44:152,18,0	0/0:10,0:10:23.82:0,24,188	0/0:16,0:13:22.91:0,23,164	0/0:11,0:9:17.95:0,18,148	0/0:26,0:26:74.01:0,74,538	0/0:12,0:9:26.93:0,27,228	0/1:34,1:32:60.91:285,0,61	0/0:24,0:20:44.67:0,45,351
chr10	45966027	.	T	TGTTTTTTGTTTTG	3921.79	PASS	AB=0.852;AC=9;AF=0.161;AN=56;BaseQRankSum=-2.088;DP=605;FS=1.937;HRun=0;HaplotypeScore=233.2049;InbreedingCoeff=0.4333;MQ=46.26;MQ0=42;MQRankSum=-6.212;QD=26.15;ReadPosRankSum=5.559;VQSLOD=2.4534;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:19.92:0,20,436	0/1:13,0:12:11.84:324,0,12	0/0:34,0:4:8.73:0,9,63	0/0:28,0:5:0.73:0,1,7	0/0:24,0:22:59.12:0,59,975	0/0:22,0:20:33.33:0,33,582	0/0:12,0:12:22.65:0,23,174	0/0:15,0:9:24.54:0,25,397	0/0:7,0:7:3.13:0,3,171	0/0:33,0:31:54.67:0,55,1079	0/0:24,0:23:64.96:0,65,1091	0/0:24,0:22:42.36:0,42,422	0/0:21,0:20:42.76:0,43,443	0/0:11,0:10:24.92:0,25,437	0/1:6,10:29:68.68:332,0,69	0/0:19,0:16:45.71:0,46,712	0/0:27,0:27:78.11:0,78,1370	0/0:16,0:15:31.04:0,31,674	1/1:27,0:23:10.22:722,10,0	1/1:33,1:34:6.21:1421,6,0	1/1:12,0:10:5.59:236,6,0	0/0:12,0:12:22.33:0,22,170	0/0:16,0:13:22.70:0,23,177	0/0:15,0:12:11.67:0,12,98	0/0:26,0:26:68.61:0,69,937	0/0:15,0:12:4.51:0,5,379	0/1:33,0:30:52.76:886,0,53	0/0:25,0:21:49.48:0,49,547
chr10	45966029	.	TTTTTTTTTTTTTTTA	T	1315.13	PASS	AB=0.957;AC=10;AF=0.179;AN=56;BaseQRankSum=-2.543;DP=585;FS=2.855;HRun=0;HaplotypeScore=218.6132;InbreedingCoeff=-0.2155;MQ=45.30;MQ0=42;MQRankSum=1.154;QD=8.12;ReadPosRankSum=-5.993;VQSLOD=1.1897;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:26,1:26:62.10:404,0,62	0/0:14,0:13:13.42:0,13,1089	0/0:34,0:4:8.94:0,9,119	0/0:25,0:3:7.48:0,7,47	0/0:23,0:21:42.48:0,42,2323	0/1:18,1:17:99:315,0,253	0/1:13,0:13:33.62:83,0,34	0/0:15,0:9:25.63:0,26,1065	0/1:8,0:8:35.74:111,0,36	0/0:31,0:29:80.79:0,81,2846	0/0:24,0:23:60.68:0,61,2655	0/1:13,9:20:95.91:96,0,122	0/1:18,0:17:99:269,0,237	0/0:10,0:9:24.08:0,24,1095	0/0:25,0:24:19.36:0,19,884	0/0:17,0:14:42.14:0,42,1679	0/0:26,0:26:72.22:0,72,3541	0/0:16,0:15:10.46:0,10,1436	0/0:27,0:23:66.18:0,66,2635	0/0:37,0:36:74.37:0,74,3494	0/1:11,0:9:26.05:26,0,527	0/1:12,0:12:0.04:0,0,77	0/1:15,0:12:24.61:103,0,25	0/1:16,1:14:47.18:47,0,76	0/0:26,0:26:47.15:0,47,2963	0/0:16,0:13:12.56:0,13,1011	0/0:32,0:29:85.47:0,85,3280	0/0:25,0:21:47.93:0,48,1651
chr10	45966042	.	TTA	T	4540.58	PASS	AB=0.952;AC=44;AF=0.786;AN=56;BaseQRankSum=-5.709;DP=478;FS=19.935;HRun=0;HaplotypeScore=81.5509;InbreedingCoeff=0.1932;MQ=44.71;MQ0=32;MQRankSum=7.083;QD=10.84;ReadPosRankSum=2.543;VQSLOD=3.1087;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:19:47.16:340,47,0	0/1:10,0:10:5.47:94,0,5	0/0:15,0:2:5.99:0,6,48	0/0:18,0:2:5.99:0,6,50	0/1:24,0:23:18.26:261,0,18	1/1:13,0:11:5.08:195,5,0	1/1:10,0:10:29.72:219,30,0	0/1:16,0:11:39.44:101,0,39	1/1:11,0:11:32.83:256,33,0	1/1:21,0:19:24.59:310,25,0	1/1:26,0:25:31.34:357,31,0	1/1:9,0:9:2.99:23,3,0	1/1:14,0:13:6.92:200,7,0	1/1:11,0:10:0.69:95,1,0	1/1:21,0:20:12.94:166,13,0	1/1:14,0:12:16.64:176,17,0	0/0:26,0:26:58.36:0,58,478	1/1:14,0:13:20.17:154,20,0	0/1:22,2:21:54.90:67,0,55	0/1:34,3:36:49.32:292,0,49	1/1:8,1:8:9.68:112,10,0	1/1:5,0:5:14.92:118,15,0	1/1:10,0:9:5.68:41,6,0	1/1:11,0:9:11.37:91,11,0	1/1:22,0:22:2.38:180,2,0	1/1:15,0:14:18.51:249,19,0	0/1:27,5:29:34.34:248,0,34	1/1:19,1:16:23.88:193,24,0
chr10	45966043	.	TA	T	5201.60	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=1.227;DP=398;FS=4.503;HRun=2;HaplotypeScore=57.6038;InbreedingCoeff=0.7567;MQ=46.37;MQ0=27;MQRankSum=1.062;QD=15.12;ReadPosRankSum=-0.347;VQSLOD=4.3288;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:19:46.20:330,46,0	1/1:5,3:8:21.29:181,21,0	0/0:14,0:2:5.99:0,6,48	0/0:17,0:2:5.99:0,6,50	1/1:22,0:22:47.75:371,48,0	1/1:10,0:11:8.17:185,8,0	1/1:10,0:10:29.72:218,30,0	1/1:14,0:10:10.18:165,10,0	1/1:11,0:11:32.75:249,33,0	1/1:19,0:17:38.81:317,39,0	1/1:18,1:20:52.62:380,53,0	1/1:9,0:9:2.90:16,3,0	1/1:13,0:13:9.23:182,9,0	1/1:10,0:9:20.89:160,21,0	1/1:19,1:19:30.71:220,31,0	1/1:8,1:9:19.93:171,20,0	0/0:22,0:22:44.79:0,45,369	1/1:9,0:9:20.92:164,21,0	1/1:11,1:9:21.14:124,21,0	1/1:21,0:22:59.14:390,59,0	1/1:8,0:7:14.86:107,15,0	1/1:6,0:6:17.92:143,18,0	1/1:10,0:9:5.73:35,6,0	1/1:10,0:9:11.94:91,12,0	1/1:16,0:16:35.61:230,36,0	1/1:13,0:12:32.92:267,33,0	1/1:19,0:17:45.42:314,45,0	1/1:18,0:16:27.44:191,27,0
chr10	45966880	.	CTT	C	3059.83	PASS	AB=0.895;AC=20;AF=0.357;AN=56;BaseQRankSum=-5.150;DP=497;FS=3.628;HRun=13;HaplotypeScore=79.8107;InbreedingCoeff=0.8008;MQ=59.96;MQ0=18;MQRankSum=1.657;QD=17.29;ReadPosRankSum=2.514;VQSLOD=3.1649;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:27:68.37:0,68,838	0/0:2,0:5:8:0,8,61	0/0:14,0:10:2.07:0,2,81	0/1:10,0:6:5.70:6,0,46	1/1:3,20:24:62.75:581,63,0	0/0:16,0:20:34.47:0,34,344	0/0:11,0:10:24.95:0,25,330	0/0:10,0:19:34.17:0,34,294	0/0:15,1:15:9.41:0,9,378	1/1:3,20:23:48.93:560,49,0	1/1:4,17:21:37.56:400,38,0	0/0:10,0:10:23.53:0,24,282	0/0:15,0:16:35.60:0,36,467	1/1:1,13:15:23.99:282,24,0	0/0:1,1:21:5.49:0,5,78	1/1:0,12:13:32.79:303,33,0	0/0:29,0:31:68.27:0,68,840	1/1:4,6:9:18:174,18,0	0/1:11,1:13:9.14:9,0,65	0/0:6,2:27:28.10:0,28,201	0/0:1,0:12:24.83:0,25,85	0/0:15,0:18:41.56:0,42,514	0/0:17,0:15:33.54:0,34,454	0/0:17,0:18:42.14:0,42,608	1/1:1,11:12:33.05:320,33,0	1/1:5,16:22:53.54:489,54,0	0/0:5,0:28:59.87:0,60,219	1/1:4,6:9:15.01:145,15,0
chr10	45974206	.	A	ACC	3026.76	PASS	AB=0.838;AC=33;AF=0.589;AN=56;BaseQRankSum=2.264;DP=342;FS=13.113;HRun=0;HaplotypeScore=72.5690;InbreedingCoeff=0.3521;MQ=50.54;MQ0=39;MQRankSum=-2.716;QD=13.33;ReadPosRankSum=4.535;VQSLOD=2.3574;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:12:5.55:0,6,48	1/1:1,5:6:17.92:189,18,0	0/1:43,0:4:14.54:15,0,18	0/0:24,0:7:11.49:0,11,91	1/1:2,8:9:1.21:268,1,0	0/0:11,0:11:7.59:0,8,53	0/0:10,0:10:8.67:0,9,69	0/1:15,0:13:9.05:9,0,71	0/1:13,0:13:2.47:6,0,2	1/1:4,12:12:23.81:288,24,0	1/1:0,10:10:24:282,24,0	1/1:12,0:11:3.68:13,4,0	0/0:4,0:4:4.78:0,5,40	0/1:1,4:5:28.88:67,0,29	1/1:0,11:11:15.04:176,15,0	1/1:7,5:11:26.80:325,27,0	0/0:28,0:27:42.14:0,42,591	1/1:4,1:4:8.91:109,9,0	1/1:1,7:8:17.97:226,18,0	1/1:1,14:15:0.45:409,0,0	1/1:2,1:3:5.98:79,6,0	0/0:8,0:8:7.23:0,7,67	0/0:17,0:14:3.57:0,4,39	0/1:9,0:8:1.30:1,0,18	1/1:4,3:5:12.04:153,12,0	0/1:5,9:13:38.34:312,0,38	1/1:3,3:6:15.05:183,15,0	0/1:4,3:5:14.05:95,0,14
chr10	45974208	.	A	ACC	2399.46	PASS	AB=0.930;AC=37;AF=0.661;AN=56;BaseQRankSum=-1.533;DP=335;FS=0.640;HRun=0;HaplotypeScore=75.7516;InbreedingCoeff=0.2095;MQ=50.63;MQ0=39;MQRankSum=-2.537;QD=10.81;ReadPosRankSum=0.143;VQSLOD=3.3558;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,5:11:24.15:256,24,0	0/1:6,0:6:7.29:14,0,7	0/0:43,0:4:8.92:0,9,67	0/0:25,0:7:0.29:0,0,93	0/1:10,0:9:12.31:12,0,21	1/1:2,5:11:26.97:290,27,0	1/1:2,6:10:20.91:247,21,0	1/1:12,1:12:14.96:275,15,0	1/1:3,10:13:39.05:439,39,0	0/1:15,0:11:2.54:7,0,3	1/1:10,0:10:4.98:27,5,0	1/1:2,6:11:23.86:275,24,0	0/1:3,1:4:28.96:66,0,29	0/1:4,0:4:4.03:4,0,31	0/0:10,0:10:1.35:0,1,6	1/1:11,1:11:1.63:48,2,0	0/0:28,0:27:42.14:0,42,588	1/1:3,0:2:0.57:4,1,0	1/1:8,0:8:12:55,12,0	0/1:15,0:15:14.99:15,0,38	0/1:3,0:3:0.03:9,0,0	0/1:2,6:8:1.51:138,0,2	1/1:5,5:14:18.89:234,19,0	1/1:0,4:7:8.95:105,9,0	1/1:7,0:5:1.85:14,2,0	0/1:14,0:13:1.96:2,0,85	1/1:6,0:6:3.76:16,4,0	0/0:7,0:5:1.19:0,1,11
chr10	45974210	.	A	AC	1010.32	PASS	AB=0.813;AC=40;AF=0.714;AN=56;BaseQRankSum=7.024;DP=318;FS=25.851;HRun=0;HaplotypeScore=71.3645;InbreedingCoeff=0.1531;MQ=48.40;MQ0=39;MQRankSum=-2.169;QD=4.51;ReadPosRankSum=6.070;VQSLOD=1.2722;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,0:11:2.43:18,2,0	0/1:1,5:6:5.27:52,0,5	0/0:42,0:3:5.60:0,6,26	0/0:24,0:7:9.11:0,9,48	0/1:2,8:9:13.40:31,0,13	1/1:10,0:10:0.86:19,1,0	0/1:9,0:9:8.82:13,0,9	0/1:14,0:12:4.01:31,0,4	1/1:13,0:13:10.97:54,11,0	1/1:7,6:9:17.38:99,17,0	1/1:3,5:9:15.77:78,16,0	1/1:12,0:11:3.54:30,4,0	0/1:4,0:4:0.41:0,0,14	0/1:2,2:4:6.01:6,0,13	1/1:5,4:9:14.25:81,14,0	1/1:6,4:10:3.53:91,4,0	0/0:28,0:27:41.16:0,41,357	0/1:2,1:2:4.89:13,0,5	1/1:3,1:6:10.48:49,10,0	1/1:1,11:13:12.12:138,12,0	1/1:1,1:2:2.84:15,3,0	0/1:7,0:7:1.22:20,0,1	1/1:14,0:12:7.86:43,8,0	0/1:8,0:7:4.46:4,0,8	1/1:4,2:5:11.42:65,11,0	0/1:5,9:13:15.62:109,0,16	1/1:3,3:6:11.85:53,12,0	1/1:4,3:5:9.90:53,10,0
chr10	45974212	.	A	ACC	3673.12	PASS	AB=0.950;AC=47;AF=0.839;AN=56;BaseQRankSum=5.826;DP=308;FS=8.627;HRun=0;HaplotypeScore=64.8752;InbreedingCoeff=0.2945;MQ=46.61;MQ0=39;MQRankSum=-3.089;QD=15.50;ReadPosRankSum=3.440;VQSLOD=2.8607;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,5:11:23.58:161,24,0	1/1:5,0:5:14.99:135,15,0	0/0:41,0:2:5.98:0,6,50	0/1:24,0:7:0.07:0,0,58	1/1:10,0:9:6.22:197,6,0	1/1:5,5:10:23.84:198,24,0	1/1:3,6:9:20.93:169,21,0	1/1:12,1:11:3.68:179,4,0	1/1:3,10:13:38.87:328,39,0	1/1:13,0:9:17.65:136,18,0	1/1:9,0:9:20.69:220,21,0	1/1:6,6:11:23.93:193,24,0	0/1:2,1:3:16.47:16,0,17	0/1:4,0:4:14.46:69,0,14	1/1:8,0:8:14.96:132,15,0	1/1:8,1:8:20.44:150,20,0	0/0:30,0:29:42.14:0,42,578	1/1:2,0:1:2.99:23,3,0	1/1:5,0:5:12:113,12,0	0/1:13,0:13:0.84:298,0,1	1/1:1,0:1:2.98:21,3,0	1/1:1,5:6:14.56:106,15,0	1/1:9,5:11:23.69:164,24,0	1/1:5,3:7:8.94:86,9,0	1/1:7,0:5:11.91:104,12,0	0/1:14,0:13:11.37:242,0,11	1/1:6,0:6:15:159,15,0	1/1:7,0:5:0.68:76,1,0
chr10	45974216	.	A	AC	2188.64	PASS	AB=0.811;AC=47;AF=0.870;AN=54;BaseQRankSum=3.807;DP=270;FS=33.352;HRun=0;HaplotypeScore=61.5506;InbreedingCoeff=0.2884;MQ=39.36;MQ0=38;MQRankSum=-1.359;QD=11.83;ReadPosRankSum=3.633;VQSLOD=2.1638;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,5:9:1.78:68,2,0	1/1:5,0:5:6.70:86,7,0	./.	0/0:20,0:4:8.21:0,8,44	1/1:10,0:9:5.17:61,5,0	1/1:5,5:10:20.76:131,21,0	0/1:3,6:9:4.67:77,0,5	0/1:4,1:4:9.06:17,0,9	1/1:3,10:13:20.95:201,21,0	1/1:11,0:7:17.98:150,18,0	1/1:7,0:7:19.45:113,19,0	1/1:3,6:8:2.33:101,2,0	1/1:2,1:3:2.90:23,3,0	0/1:4,0:4:0.77:11,0,1	1/1:5,0:5:14.88:114,15,0	1/1:8,1:8:20.91:164,21,0	0/0:30,0:29:39.50:0,39,311	1/1:2,0:1:3:25,3,0	1/1:4,0:4:8.95:68,9,0	1/1:13,0:13:18.14:232,18,0	1/1:1,0:1:3:25,3,0	1/1:0,5:5:14.34:103,14,0	1/1:7,5:9:20.10:149,20,0	1/1:4,3:6:3.40:30,3,0	1/1:6,0:4:8.89:65,9,0	1/1:13,0:12:11.67:181,12,0	1/1:5,0:5:5.26:60,5,0	1/1:7,0:5:10.27:62,10,0
chr10	45974312	.	A	ACC	277.84	PASS	AB=0.875;AC=25;AF=0.735;AN=34;BaseQRankSum=4.010;DP=177;FS=22.275;HRun=0;HaplotypeScore=32.9853;InbreedingCoeff=0.3296;MQ=18.69;MQ0=93;MQRankSum=-0.248;QD=2.75;ReadPosRankSum=0.941;VQSLOD=-0.1162;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:3:4.83:38,5,0	./.	./.	0/0:10,0:2:1.29:0,1,32	0/0:6,0:3:0.53:0,1,7	./.	./.	./.	./.	1/1:5,2:2:6.02:69,6,0	0/0:2,0:1:2.88:0,3,15	./.	./.	1/1:3,0:4:0.47:1,0,0	1/1:7,1:2:2.44:27,2,0	1/1:2,1:2:3.48:38,3,0	0/0:23,0:18:33:0,33,429	1/1:8,1:3:8.86:59,9,0	./.	./.	./.	0/1:6,1:2:2.32:39,0,2	1/1:5,0:2:0.28:1,0,0	1/1:8,0:1:0.47:1,0,0	1/1:8,1:4:3.48:41,3,0	1/1:6,1:4:4.22:18,4,0	1/1:4,0:2:3.01:33,3,0	1/1:17,0:2:2.56:17,3,0
chr10	45974343	.	ACC	A	758.83	PASS	AB=0.966;AC=19;AF=0.339;AN=56;BaseQRankSum=5.180;DP=479;FS=1.748;HRun=2;HaplotypeScore=118.2130;InbreedingCoeff=0.2001;MQ=37.36;MQ0=83;MQRankSum=-2.192;QD=3.51;ReadPosRankSum=0.798;VQSLOD=-0.5957;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:26,4:24:54.24:167,0,54	0/0:7,0:6:18.02:0,18,200	0/0:39,0:15:18.84:0,19,309	0/0:60,0:11:20.23:0,20,226	0/0:16,1:15:31.01:0,31,351	1/1:9,0:7:7.79:97,8,0	1/1:8,1:8:16.06:120,16,0	0/0:25,0:17:45.14:0,45,605	1/1:12,0:10:21.62:136,22,0	0/1:22,0:18:34.82:35,0,309	0/0:8,0:6:13.57:0,14,143	0/1:11,0:9:1.20:1,0,32	0/1:8,0:8:1.90:57,0,2	0/0:9,1:8:11.13:0,11,113	0/0:19,0:14:14.71:0,15,432	0/1:11,0:9:7.87:8,0,189	0/1:23,0:20:1.92:2,0,304	0/1:9,2:9:99:102,0,168	0/0:17,0:9:17.85:0,18,239	0/0:21,0:18:50.63:0,51,543	0/0:9,0:5:15.03:0,15,167	1/1:13,0:10:16.74:137,17,0	0/1:9,0:7:25.85:34,0,26	0/1:15,1:12:6.09:6,0,79	0/0:13,0:9:1.20:0,1,205	0/1:23,1:21:24.15:24,0,487	0/0:18,0:15:42.06:0,42,478	0/1:8,0:5:0.71:1,0,91
chr10	45974344	.	CCA	C	1147.74	PASS	AB=0.965;AC=14;AF=0.250;AN=56;BaseQRankSum=4.682;DP=468;FS=5.835;HRun=0;HaplotypeScore=117.0221;InbreedingCoeff=0.4864;MQ=37.78;MQ0=76;MQRankSum=-3.985;QD=9.26;ReadPosRankSum=2.834;VQSLOD=3.2135;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:25,3:24:17.11:239,0,17	0/0:7,0:6:18.06:0,18,251	0/0:39,0:15:28.72:0,29,414	0/0:60,0:11:24.95:0,25,302	0/0:17,0:15:35.22:0,35,526	1/1:4,4:7:19.25:194,19,0	1/1:5,4:8:18.02:193,18,0	0/0:25,0:17:45.15:0,45,824	1/1:7,5:10:24.01:261,24,0	0/0:22,0:18:7.96:0,8,483	0/0:8,0:6:14.71:0,15,223	0/1:11,0:9:28.25:28,0,30	0/1:7,1:8:1.41:82,0,1	0/0:9,0:7:11.91:0,12,164	0/0:18,0:14:34.26:0,34,548	0/0:10,0:8:12.86:0,13,304	0/0:19,0:17:25.76:0,26,468	0/1:11,0:9:41.21:41,0,227	0/0:16,0:9:18.42:0,18,309	0/0:22,0:19:54.73:0,55,711	0/0:9,0:5:15.04:0,15,228	1/1:10,2:10:10.59:208,11,0	0/1:9,0:7:0.01:61,0,0	0/1:16,0:12:15.60:16,0,44	0/0:13,0:9:18.06:0,18,317	0/0:25,0:21:29.07:0,29,773	0/0:17,0:15:42.14:0,42,592	0/0:8,0:5:5.42:0,5,137
chr10	45974351	.	A	AAACAAAC	4093.69	PASS	AB=1.000;AC=25;AF=0.446;AN=56;BaseQRankSum=2.733;DP=441;FS=0.957;HRun=0;HaplotypeScore=158.6819;InbreedingCoeff=0.6967;MQ=39.69;MQ0=42;MQRankSum=-2.983;QD=22.13;ReadPosRankSum=2.421;VQSLOD=3.3013;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:26:43.13:781,43,0	0/1:7,0:7:28.57:48,0,29	0/0:43,0:15:32.10:0,32,593	0/0:60,0:11:15.54:0,16,241	0/0:13,0:12:33.04:0,33,418	1/1:7,0:7:21.07:562,21,0	1/1:9,0:9:18.06:446,18,0	0/0:27,0:21:18.11:0,18,526	1/1:12,0:10:27.09:476,27,0	0/0:17,0:15:38.23:0,38,393	0/0:7,0:6:16.60:0,17,217	1/1:2,6:9:9.03:230,9,0	1/1:8,0:8:10.08:275,10,0	0/0:7,0:6:10.46:0,10,93	0/1:18,0:17:61.58:90,0,62	0/0:10,0:9:5.32:0,5,274	0/0:22,0:20:39.13:0,39,804	0/0:9,0:9:18.60:0,19,186	0/1:12,0:7:11.84:12,0,41	1/1:23,0:22:4.39:122,4,0	0/0:5,0:5:5.21:0,5,67	1/1:11,0:11:25.38:453,25,0	1/1:7,0:7:18.05:279,18,0	1/1:15,0:13:10.88:214,11,0	0/0:7,0:7:21.03:0,21,295	0/0:23,0:20:38.28:0,38,686	1/1:18,0:16:22.29:108,22,0	0/0:6,0:6:13.77:0,14,119
chr10	45974354	.	C	CA	1720.70	PASS	AB=0.767;AC=16;AF=0.286;AN=56;BaseQRankSum=1.902;DP=431;FS=5.031;HRun=3;HaplotypeScore=119.9768;InbreedingCoeff=0.7140;MQ=40.36;MQ0=28;MQRankSum=-3.333;QD=16.55;ReadPosRankSum=3.004;VQSLOD=3.5281;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:13,13:26:5.86:393,0,6	0/0:8,0:8:20.97:0,21,189	0/0:44,0:16:33:0,33,367	0/0:60,0:11:17.70:0,18,193	0/0:12,0:12:32.65:0,33,360	1/1:4,3:7:21.03:237,21,0	1/1:7,3:10:16.34:186,16,0	0/0:26,0:21:59.86:0,60,648	1/1:8,3:11:9.08:264,9,0	0/0:14,0:13:31.87:0,32,286	0/0:7,0:7:10.14:0,10,153	1/1:10,0:10:6.01:64,6,0	1/1:5,2:8:1.43:142,1,0	0/0:6,0:6:12.03:0,12,140	0/0:17,0:17:50.81:0,51,461	0/0:11,0:10:20.18:0,20,191	0/0:21,0:21:38.50:0,38,432	0/0:7,0:7:10.62:0,11,78	0/0:11,0:8:23.02:0,23,199	0/0:24,0:23:59.86:0,60,527	0/0:5,0:5:12.01:0,12,110	1/1:6,4:10:21.66:248,22,0	1/1:3,4:7:17.73:224,18,0	0/1:12,2:13:15.48:147,0,15	0/0:7,0:7:2.03:0,2,155	0/0:23,0:20:50.93:0,51,563	0/0:19,0:17:46.45:0,46,430	0/0:5,0:5:14.94:0,15,140
chr10	45974366	.	C	CA	847.89	PASS	AB=0.934;AC=19;AF=0.339;AN=56;BaseQRankSum=1.447;DP=474;FS=0.000;HRun=2;HaplotypeScore=170.2250;InbreedingCoeff=0.1281;MQ=43.26;MQ0=11;MQRankSum=-3.256;QD=3.98;ReadPosRankSum=-1.141;VQSLOD=-0.2457;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,1:31:28.29:0,28,270	0/0:9,0:9:26.78:0,27,217	0/0:32,0:18:21.19:0,21,311	0/1:39,0:11:12.89:13,0,123	1/1:10,4:14:10.88:189,11,0	0/1:13,0:13:25.16:25,0,106	0/1:19,1:20:32.77:33,0,124	0/0:34,0:30:65.94:0,66,413	0/0:14,0:14:12.85:0,13,216	1/1:15,2:17:12.47:143,12,0	1/1:8,0:8:4.16:32,4,0	0/1:13,0:13:5.79:6,0,41	0/0:12,0:12:13.88:0,14,107	1/1:3,2:5:13.78:120,14,0	0/0:19,0:19:56.54:0,57,483	0/1:10,2:12:7.53:93,0,8	0/0:24,0:24:46.18:0,46,532	0/1:6,0:6:8.15:23,0,8	0/0:13,0:12:32.89:0,33,290	0/0:29,0:29:81.35:0,81,676	0/0:4,0:4:7.71:0,8,45	0/1:11,1:12:28.86:29,0,160	0/1:15,0:15:7.40:7,0,104	0/0:16,0:17:11.68:0,12,77	0/1:10,2:12:7.74:135,0,8	0/1:18,2:21:76.94:134,0,77	0/0:20,0:19:52.64:0,53,430	0/1:4,1:5:39.11:41,0,39
chr10	45974369	.	C	CA	2477.46	PASS	AB=0.985;AC=40;AF=0.714;AN=56;BaseQRankSum=2.772;DP=470;FS=12.268;HRun=7;HaplotypeScore=151.2836;InbreedingCoeff=0.1281;MQ=44.23;MQ0=9;MQRankSum=-2.781;QD=6.50;ReadPosRankSum=2.683;VQSLOD=0.2265;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:30:15.64:50,0,16	1/1:10,0:10:14.90:84,15,0	0/0:33,0:16:23.47:0,23,253	0/0:31,0:9:9.47:0,9,96	1/1:15,0:15:10.57:194,11,0	1/1:10,0:13:10.75:108,11,0	1/1:18,0:20:17.42:94,17,0	1/1:6,23:26:47.33:690,47,0	0/1:13,0:14:1.70:42,0,2	1/1:18,0:18:11.94:127,12,0	1/1:8,0:8:3.68:31,4,0	0/1:15,0:15:11.79:52,0,12	1/1:12,0:13:7.14:26,7,0	1/1:6,0:6:13.33:130,13,0	1/1:22,0:22:23.57:120,24,0	0/1:13,0:13:9.63:77,0,10	0/0:24,0:24:42.39:0,42,406	0/1:4,0:4:7.27:24,0,7	0/1:13,0:12:7.55:12,0,8	1/1:28,0:29:25.19:154,25,0	1/1:3,0:3:3.22:12,3,0	1/1:12,0:13:11.74:96,12,0	1/1:15,0:15:6:48,6,0	0/1:17,0:17:5.66:22,0,6	0/1:14,0:14:6.91:157,0,7	0/1:21,0:20:20.15:101,0,20	1/1:20,0:19:33.56:148,34,0	0/1:5,0:5:6.38:45,0,6
chr10	45974370	.	A	AAC	3734.16	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=2.635;DP=472;FS=21.314;HRun=0;HaplotypeScore=164.3685;InbreedingCoeff=0.1343;MQ=45.21;MQ0=9;MQRankSum=-5.603;QD=13.63;ReadPosRankSum=4.606;VQSLOD=2.1185;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:31,0:30:99:130,0,174	1/1:7,4:11:3:282,3,0	0/0:33,0:17:28.13:0,28,413	0/0:31,0:10:5.30:0,5,169	0/0:15,0:15:3.09:0,3,118	0/1:13,0:13:37.58:70,0,38	0/1:21,0:21:4.13:84,0,4	0/0:29,0:26:34.33:0,34,215	0/1:14,0:14:9.78:100,0,10	0/0:19,0:19:21.87:0,22,198	0/0:8,0:8:16.50:0,16,112	0/1:15,0:15:10.27:10,0,88	0/1:13,0:13:14.83:15,0,97	0/1:6,0:6:21.77:22,0,36	1/1:12,10:22:59.29:782,59,0	0/1:13,0:13:15.62:16,0,65	0/0:24,0:24:51.05:0,51,676	0/0:4,0:4:9.15:0,9,69	1/1:14,0:13:30.57:225,31,0	1/1:29,0:29:81.63:1046,82,0	1/1:2,0:2:5.91:68,6,0	0/1:13,0:13:13.33:81,0,13	0/1:15,0:15:27.31:27,0,47	0/0:17,0:17:10.75:0,11,90	0/0:14,0:14:25.75:0,26,188	0/1:22,0:21:14.79:15,0,252	1/1:20,0:19:50.77:763,51,0	0/0:4,0:4:9.26:0,9,77
chr10	45974371	.	A	AC	1548.02	PASS	AB=0.978;AC=23;AF=0.411;AN=56;BaseQRankSum=2.389;DP=463;FS=39.641;HRun=0;HaplotypeScore=151.9234;InbreedingCoeff=-0.0791;MQ=45.54;MQ0=8;MQRankSum=-5.284;QD=5.18;ReadPosRankSum=7.789;VQSLOD=1.5507;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:29,1:29:50.79:51,0,242	0/1:9,2:11:39.26:131,0,39	0/0:30,0:17:41.89:0,42,460	0/0:29,0:9:8.06:0,8,221	0/1:15,0:15:25.75:26,0,113	0/1:13,0:13:17.06:17,0,106	0/1:21,0:21:18.87:19,0,135	0/1:29,0:26:73.56:112,0,74	0/1:14,0:14:49.86:50,0,52	0/0:18,0:18:15.95:0,16,253	0/0:8,0:8:14.34:0,14,118	0/1:15,0:15:1.65:2,0,109	0/0:12,0:12:21.77:0,22,169	0/1:5,1:6:21.74:55,0,22	0/1:21,0:21:58.98:184,0,59	0/1:14,0:14:1.49:1,0,109	0/0:24,0:24:51.05:0,51,645	0/0:4,0:4:9.28:0,9,74	1/1:12,2:13:10.02:119,10,0	1/1:15,14:29:77.32:493,77,0	1/1:1,0:2:5.37:33,5,0	0/1:13,0:13:22.46:56,0,22	0/1:14,0:14:10.06:10,0,165	0/0:16,0:16:17.02:0,17,116	0/1:14,0:14:14.61:15,0,175	0/0:22,0:21:25.85:0,26,304	1/1:6,14:19:39.47:344,39,0	0/1:4,0:4:3.68:4,0,48
chr10	45974373	.	A	AC	776.29	PASS	AB=0.940;AC=12;AF=0.214;AN=56;BaseQRankSum=0.394;DP=466;FS=25.952;HRun=0;HaplotypeScore=160.8994;InbreedingCoeff=0.1310;MQ=45.73;MQ0=8;MQRankSum=-2.034;QD=5.18;ReadPosRankSum=5.432;VQSLOD=1.7687;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:30:56.79:0,57,434	0/0:11,0:11:30:0,30,182	0/0:29,0:16:31.09:0,31,419	0/0:27,0:8:17.56:0,18,230	0/1:16,0:16:29:29,0,96	0/0:13,0:13:30.38:0,30,204	0/0:21,0:21:31.41:0,31,262	0/1:30,0:27:69.55:126,0,70	0/0:15,0:15:36.58:0,37,241	0/0:19,0:19:12.31:0,12,238	0/0:9,0:9:15.52:0,16,125	0/0:14,0:14:18.36:0,18,164	0/0:12,0:12:30.55:0,31,201	0/1:7,0:7:24.37:24,0,38	0/0:22,0:22:63.66:0,64,423	0/1:13,0:13:8.96:9,0,109	0/0:24,0:24:51.06:0,51,648	0/0:4,0:4:9.28:0,9,74	0/1:7,2:11:42.94:43,0,45	0/1:9,14:29:20.32:298,0,20	1/1:2,0:2:5.89:38,6,0	0/0:14,0:14:26.03:0,26,186	0/0:15,0:15:33.62:0,34,242	0/0:15,0:15:17.78:0,18,129	0/1:14,0:14:14.57:15,0,181	0/0:21,0:20:23.38:0,23,287	1/1:6,14:21:41.17:345,41,0	0/1:4,0:4:3.68:4,0,48
chr10	45974376	.	AC	A	4859.95	PASS	AB=1.000;AC=47;AF=0.839;AN=56;BaseQRankSum=5.402;DP=449;FS=10.026;HRun=1;HaplotypeScore=139.2272;InbreedingCoeff=0.8083;MQ=51.14;MQ0=6;MQRankSum=-4.292;QD=13.85;ReadPosRankSum=-2.381;VQSLOD=2.7835;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:25,3:27:17.39:182,17,0	1/1:9,2:11:23.87:203,24,0	0/0:28,0:17:19.58:0,20,333	0/0:18,0:10:20.92:0,21,226	1/1:15,0:15:23.30:104,23,0	1/1:13,1:14:31.26:216,31,0	1/1:20,0:20:39.75:287,40,0	0/0:28,0:25:41.41:0,41,297	1/1:14,2:16:30.56:252,31,0	1/1:17,0:17:34.27:241,34,0	1/1:9,0:9:15.82:92,16,0	1/1:14,0:14:9.72:85,10,0	1/1:11,0:11:15.38:105,15,0	1/1:7,0:7:13.05:83,13,0	1/1:15,7:22:61.52:519,62,0	1/1:13,0:13:12.07:106,12,0	0/0:24,0:24:25.46:0,25,566	1/1:4,0:4:1.51:55,2,0	1/1:12,2:13:35.11:300,35,0	1/1:21,7:28:79.46:654,79,0	1/1:1,1:2:5.81:49,6,0	1/1:12,1:13:28.68:189,29,0	1/1:13,2:15:27.67:240,28,0	1/1:16,0:16:11.07:79,11,0	1/1:15,0:15:24.65:177,25,0	1/1:21,0:20:24.45:207,24,0	1/1:20,2:20:61.60:427,62,0	0/1:4,0:4:0.63:10,0,1
chr10	45974389	.	A	AC	2554.47	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=4.952;DP=468;FS=0.467;HRun=3;HaplotypeScore=185.8454;InbreedingCoeff=0.9523;MQ=56.36;MQ0=1;MQRankSum=-7.975;QD=21.29;ReadPosRankSum=-1.802;VQSLOD=2.2789;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:47:0,47,502	0/0:12,0:12:27.03:0,27,294	0/0:20,0:13:22.31:0,22,250	0/0:14,0:11:25.86:0,26,267	1/1:7,7:15:20.85:227,21,0	0/0:15,0:15:36.09:0,36,408	0/0:17,0:17:30.05:0,30,342	0/0:21,0:21:54.84:0,55,629	0/0:11,0:11:17.76:0,18,168	1/1:7,13:21:50.97:602,51,0	1/1:8,2:11:17.73:152,18,0	0/0:13,0:13:29.87:0,30,291	0/0:13,0:13:30.02:0,30,318	1/1:8,5:13:23.31:242,23,0	0/0:26,0:26:59.18:0,59,602	1/1:4,11:15:26.91:353,27,0	0/0:26,0:26:63.13:0,63,698	1/1:1,5:6:11.95:140,12,0	0/0:19,0:19:48.08:0,48,528	0/0:31,0:31:74.31:0,74,872	0/0:4,0:4:3.01:0,3,36	0/0:11,0:11:17.62:0,18,214	0/0:19,0:19:42.07:0,42,445	0/0:17,0:17:27.02:0,27,297	1/1:7,10:17:30.57:413,31,0	1/1:9,10:19:42.93:513,43,0	0/0:28,0:26:66.07:0,66,718	1/1:0,3:3:9.03:123,9,0
chr10	45974441	.	TCAAAGTGATTCCTCCCTTA	T	25059.42	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=16.692;DP=534;FS=20.869;HRun=0;HaplotypeScore=302.2794;InbreedingCoeff=0.9555;MQ=72.58;MQ0=0;MQRankSum=-14.343;QD=107.55;ReadPosRankSum=4.627;VQSLOD=3.5256;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:84.72:0,85,7068	1/1:1,6:7:15.52:728,16,0	0/0:15,0:15:45.13:0,45,3077	0/0:22,0:22:66.23:0,66,4437	1/1:4,13:17:36.12:1555,36,0	0/0:9,0:9:27.09:0,27,2236	0/0:30,0:30:87.30:0,87,7532	0/0:29,0:29:84.27:0,84,5628	0/0:24,0:24:69.24:0,69,6288	1/1:6,16:22:48.14:2467,48,0	1/1:3,13:16:39.10:1984,39,0	0/0:19,0:19:57.20:0,57,5077	0/0:18,0:18:51.13:0,51,4276	1/1:1,13:14:36.12:1962,36,0	1/1:6,17:23:57.20:2985,57,0	1/1:4,8:12:24.08:1318,24,0	0/0:32,0:32:93.30:0,93,7498	1/1:5,1:6:3.01:165,3,0	1/1:5,8:13:24.08:1204,24,0	1/1:15,13:28:44.34:1936,44,0	1/1:6,7:13:12.75:625,13,0	0/0:20,0:20:60.21:0,60,5080	0/0:20,0:20:60.21:0,60,5296	0/0:31,0:31:90.31:0,90,7608	1/1:1,14:15:39.13:2119,39,0	1/1:2,22:24:66.23:3508,66,0	1/1:4,15:19:42.14:2177,42,0	1/1:0,4:4:6.02:329,6,0
chr10	45975542	.	GT	G	1184.78	PASS	AC=18;AF=1.000;AN=18;DP=36;FS=0.000;HRun=1;HaplotypeScore=16.6721;MQ=47.59;MQ0=0;QD=32.91;VQSLOD=2.8086;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	./.	./.	1/1:0,3:3:6.02:84,6,0	./.	./.	./.	./.	./.	./.	1/1:0,1:1:3.01:42,3,0	./.	./.	1/1:0,3:3:9.03:126,9,0	1/1:0,8:8:21.07:293,21,0	1/1:0,2:2:6.02:84,6,0	./.	1/1:0,8:8:17.81:251,18,0	./.	./.	1/1:0,5:5:15.05:209,15,0	1/1:1,4:5:9.03:126,9,0	1/1:0,1:1:3.01:42,3,0	./.	./.
chr10	45975681	.	C	CG	3552.85	PASS	AB=0.714;AC=28;AF=0.824;AN=34;BaseQRankSum=-3.024;DP=127;FS=0.000;HRun=2;HaplotypeScore=52.8337;InbreedingCoeff=0.0733;MQ=61.68;MQ0=0;MQRankSum=1.879;QD=29.61;ReadPosRankSum=1.152;VQSLOD=3.0810;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,3:4:8.99:110,9,0	1/1:3,0:3:5.95:42,6,0	./.	0/0:1,0:1:3.01:0,3,39	./.	./.	0/1:4,12:16:27.70:471,0,28	./.	./.	0/1:1,3:4:18.09:103,0,18	./.	1/1:2,4:6:8.66:102,9,0	1/1:0,1:1:3.01:45,3,0	1/1:1,3:4:8.94:134,9,0	./.	1/1:1,1:2:2.84:44,3,0	1/1:2,17:19:45.12:648,45,0	1/1:1,12:13:31.52:532,32,0	1/1:2,3:5:12.03:157,12,0	./.	1/1:6,20:26:57.17:810,57,0	./.	0/1:2,0:2:0:0,0,0	1/1:1,8:9:18.05:227,18,0	1/1:0,1:1:3:27,3,0	0/1:3,2:5:21.29:102,0,21	./.	./.
chr10	45978375	.	C	CAGG	9649.01	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-13.912;DP=657;FS=0.708;HRun=0;HaplotypeScore=89.0196;InbreedingCoeff=0.9978;MQ=89.59;MQ0=0;MQRankSum=-5.342;QD=52.16;ReadPosRankSum=3.493;VQSLOD=7.3242;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,150,2380	0/0:6,0:6:18.04:0,18,264	0/0:27,0:27:37.82:0,38,920	0/0:23,0:23:57.03:0,57,813	1/1:0,14:15:33.11:724,33,0	0/0:21,0:21:57.19:0,57,916	0/0:21,0:21:57.15:0,57,845	0/0:36,0:36:93.29:0,93,1432	0/0:19,0:19:48.16:0,48,769	1/1:3,23:27:75.24:1607,75,0	1/1:0,10:10:21.07:460,21,0	0/0:28,0:28:75.20:0,75,1107	0/0:12,0:12:27.09:0,27,433	1/1:2,19:21:45.15:992,45,0	0/0:40,0:40:99:0,111,1784	1/1:5,24:29:72.25:1580,72,0	0/0:30,0:30:78.27:0,78,1251	1/1:3,20:24:51.18:1126,51,0	0/0:28,0:28:78.24:0,78,1228	0/0:25,0:25:75.24:0,75,1179	0/0:17,0:17:45.10:0,45,651	0/0:25,0:25:69.21:0,69,1057	0/0:20,0:20:51.16:0,51,796	0/0:18,0:18:54.12:0,54,811	1/1:4,22:27:60.21:1324,60,0	1/1:2,18:20:57.18:1190,57,0	0/0:25,0:25:66.22:0,66,1057	1/1:1,11:12:30.10:645,30,0
chr10	45979271	.	T	TGA	1660.45	PASS	AB=0.771;AC=20;AF=0.370;AN=54;BaseQRankSum=-5.102;DP=615;FS=17.561;HRun=0;HaplotypeScore=119.7744;InbreedingCoeff=0.3034;MQ=67.41;MQ0=7;MQRankSum=3.881;QD=6.27;ReadPosRankSum=-2.582;VQSLOD=1.7433;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,6:17:9.02:136,9,0	1/1:9,0:8:12.04:161,12,0	./.	0/0:48,0:21:0.03:0,0,1	0/0:27,0:27:17.18:0,17,95	0/0:25,0:26:40.15:0,40,424	0/0:17,0:20:17.69:0,18,150	0/0:30,0:30:2.74:0,3,21	0/1:15,5:21:24.08:81,0,24	0/0:30,0:30:16.95:0,17,83	0/0:26,0:26:11.40:0,11,57	1/1:11,1:20:8.95:97,9,0	0/1:3,14:17:3.98:375,0,4	0/0:15,0:15:8.52:0,9,42	0/1:13,1:27:21.15:76,0,21	0/0:21,0:21:31.25:0,31,154	0/0:23,0:23:38.63:0,39,369	0/1:15,0:15:15.08:15,0,19	1/1:26,0:26:14.67:148,15,0	1/1:17,0:23:8.97:91,9,0	0/1:17,0:16:18.28:88,0,18	0/1:10,5:15:75.28:75,0,84	0/1:15,8:24:21.11:124,0,21	1/1:2,10:12:15.05:226,15,0	0/0:19,0:19:22.73:0,23,111	0/0:26,0:26:22.54:0,23,109	0/1:13,1:20:12.18:147,0,12	0/0:13,0:13:22.73:0,23,112
chr10	45979302	.	GA	G	864.47	PASS	AB=0.742;AC=9;AF=0.161;AN=56;BaseQRankSum=9.012;DP=652;FS=9.519;HRun=1;HaplotypeScore=122.9218;InbreedingCoeff=-0.1912;MQ=58.93;MQ0=11;MQRankSum=-1.840;QD=4.24;ReadPosRankSum=1.129;VQSLOD=-0.2457;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:51.15:0,51,637	0/0:11,0:10:30.09:0,30,391	0/0:27,0:12:33.03:0,33,378	0/0:38,0:20:47.54:0,48,635	0/1:18,7:27:99:134,0,136	0/0:36,0:36:90.15:0,90,1288	0/0:14,0:14:29.99:0,30,399	0/0:31,0:32:38.73:0,39,566	0/0:15,0:15:33.10:0,33,429	0/1:24,5:29:99:160,0,224	0/1:8,7:24:65.09:65,0,138	0/0:21,0:21:27.08:0,27,329	0/0:22,0:22:48.11:0,48,553	0/1:12,7:20:87.63:88,0,164	0/0:27,0:27:39.16:0,39,481	0/1:11,15:27:99:132,0,162	0/0:28,0:27:71.21:0,71,991	0/1:17,1:18:50.74:51,0,227	0/0:23,0:22:61.07:0,61,772	0/0:21,0:21:39.12:0,39,513	0/0:24,0:23:57.17:0,57,759	0/0:14,0:14:30.09:0,30,390	0/0:20,0:20:36.06:0,36,441	0/0:22,0:22:44.91:0,45,522	0/1:7,10:17:27.62:124,0,28	0/1:14,4:19:99:139,0,101	0/0:25,0:23:54.14:0,54,655	0/1:16,7:22:99:113,0,184
chr10	45979304	.	GAGA	G	1528.59	PASS	AB=0.808;AC=10;AF=0.179;AN=56;BaseQRankSum=10.127;DP=651;FS=7.949;HRun=0;HaplotypeScore=140.2575;InbreedingCoeff=-0.0575;MQ=60.23;MQ0=11;MQRankSum=-2.751;QD=7.84;ReadPosRankSum=2.740;VQSLOD=2.7694;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:54.14:0,54,766	0/0:11,0:10:29.31:0,29,337	0/0:30,0:15:45.06:0,45,529	0/0:36,0:20:43.53:0,44,616	0/1:18,7:25:38.11:203,0,38	0/0:35,0:35:92.27:0,92,1585	0/0:14,0:14:28.22:0,28,484	0/0:38,0:38:22.22:0,22,313	0/0:16,0:16:36.02:0,36,502	0/1:18,5:23:99:196,0,115	0/1:17,6:24:46.02:94,0,46	0/0:22,0:22:27.08:0,27,384	0/0:23,0:23:51.10:0,51,814	0/1:17,3:20:65.23:112,0,65	0/0:26,0:26:35.58:0,36,491	0/1:17,10:27:64.56:269,0,65	0/0:28,0:27:75.09:0,75,1309	0/1:15,1:16:73.03:87,0,73	0/0:22,0:21:55.92:0,56,702	0/0:20,0:20:37.65:0,38,549	0/0:25,0:24:40.73:0,41,760	0/0:14,0:14:27.08:0,27,464	0/0:20,0:20:36.06:0,36,533	0/0:23,0:23:47.95:0,48,698	1/1:6,10:16:1.28:238,1,0	0/1:13,4:18:16.43:244,0,16	0/0:24,0:22:48.14:0,48,761	0/1:18,7:25:98.87:227,0,99
chr10	45983693	.	G	GTGCA	2008.15	PASS	AB=0.988;AC=22;AF=0.407;AN=54;BaseQRankSum=4.337;DP=395;FS=11.804;HRun=0;HaplotypeScore=128.4263;InbreedingCoeff=0.5136;MQ=49.31;MQ0=10;MQRankSum=-4.621;QD=9.99;ReadPosRankSum=4.950;VQSLOD=2.2568;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:20,0:19:0.22:0,0,177	./.	0/0:14,0:6:7.66:0,8,47	0/0:14,0:8:20.68:0,21,205	1/1:11,2:13:11.97:96,12,0	0/0:13,0:13:9.17:0,9,110	0/0:14,0:13:0.77:0,1,40	0/0:10,0:10:15.78:0,16,159	0/0:15,0:15:17.17:0,17,183	1/1:10,0:10:23.44:234,23,0	1/1:7,0:7:2.95:25,3,0	0/1:18,0:18:31.13:31,0,60	0/0:17,0:16:6.80:0,7,123	1/1:3,12:15:6.02:133,6,0	0/0:7,0:7:10.19:0,10,70	1/1:10,1:10:20.97:256,21,0	0/0:24,0:23:62.95:0,63,858	0/1:19,1:20:6.31:397,0,6	0/0:21,0:20:0.06:0,0,239	0/0:8,0:8:14.37:0,14,130	0/1:25,0:22:35.19:35,0,51	0/0:8,0:7:9.23:0,9,78	0/0:11,0:10:5.51:0,6,61	0/0:18,0:18:18.87:0,19,174	1/1:22,2:23:20.99:201,21,0	1/1:20,1:21:35.60:504,36,0	1/1:14,0:13:1.16:194,1,0	1/1:3,0:3:8.98:82,9,0
chr10	45983712	.	CGT	C	268.04	PASS	AB=0.986;AC=24;AF=0.480;AN=50;BaseQRankSum=0.214;DP=399;FS=16.521;HRun=0;HaplotypeScore=137.4006;InbreedingCoeff=0.0812;MQ=41.84;MQ0=16;MQRankSum=2.155;QD=1.13;ReadPosRankSum=-1.541;VQSLOD=1.4134;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:26:3.13:0,3,13	1/1:0,1:1:3.01:32,3,0	./.	./.	1/1:11,0:11:1.44:18,1,0	0/1:19,0:19:9.73:10,0,46	1/1:27,0:26:0.63:3,1,0	0/0:4,0:4:0:0,0,0	0/1:15,0:15:28.24:30,0,28	0/1:11,0:10:6.67:7,0,25	0/1:7,0:7:0.05:0,0,0	0/0:20,0:19:9.71:0,10,33	0/0:14,0:13:4.91:0,5,16	0/0:9,0:9:4.63:0,5,16	1/1:5,3:6:9.02:93,9,0	0/1:12,0:11:7.86:25,0,8	0/1:25,5:29:78.11:78,0,537	0/1:20,0:20:42.16:54,0,42	0/1:9,0:8:1.48:1,0,12	1/1:7,0:7:3.01:33,3,0	0/0:31,1:28:8.54:0,9,47	1/1:9,0:8:1.34:4,1,0	1/1:9,0:12:1.82:4,2,0	0/0:28,0:26:2.53:0,3,5	0/1:18,0:17:0.08:0,0,0	0/1:21,0:19:2.65:3,0,84	0/0:14,0:13:16.21:0,16,91	./.
chr10	45983714	.	T	TTGC	81.30	PASS	AB=0.749;AC=9;AF=0.161;AN=56;BaseQRankSum=2.775;DP=412;FS=11.102;HRun=0;HaplotypeScore=142.0114;InbreedingCoeff=0.0243;MQ=41.39;MQ0=18;MQRankSum=0.709;QD=0.69;ReadPosRankSum=5.109;VQSLOD=1.9303;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:5.98:0,6,185	1/1:1,0:1:3.01:32,3,0	0/0:6,0:1:3.01:0,3,41	0/0:13,0:3:9.03:0,9,152	0/0:11,0:11:3.90:0,4,43	0/0:19,0:19:17.43:0,17,158	0/0:27,0:26:22.36:0,22,155	0/0:4,0:4:11.93:0,12,110	0/0:14,0:14:23.55:0,24,212	0/0:11,0:10:26.57:0,27,226	0/0:7,0:7:0:0,0,0	0/0:15,0:19:25.54:0,26,336	0/0:11,0:12:5.28:0,5,85	0/1:8,0:9:5.44:5,0,7	0/0:8,0:8:1.20:0,1,49	0/0:11,0:11:7.60:0,8,86	0/0:32,0:31:76.21:0,76,1167	0/0:19,0:19:29.20:0,29,338	0/1:2,0:7:25.31:25,0,53	0/0:4,0:8:10.30:0,10,81	0/1:18,0:29:4.97:5,0,29	0/1:7,0:8:8.93:9,0,35	0/1:11,0:12:3.96:4,0,76	0/1:24,0:26:1.09:1,0,338	0/0:17,0:17:2.68:0,3,13	0/0:20,0:18:41.27:0,41,328	0/1:2,1:14:10.90:114,0,11	0/0:2,0:1:2.97:0,3,20
chr10	45983746	.	TGTG	T	1565.86	PASS	AB=0.970;AC=24;AF=0.429;AN=56;BaseQRankSum=5.028;DP=535;FS=1.489;HRun=0;HaplotypeScore=130.2659;InbreedingCoeff=-0.0873;MQ=46.53;MQ0=31;MQRankSum=2.382;QD=4.96;ReadPosRankSum=0.033;VQSLOD=2.8562;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:34,1:33:28.38:218,0,28	0/0:3,0:3:5.52:0,6,79	0/0:50,0:10:22.17:0,22,308	0/0:40,0:4:5.76:0,6,79	1/1:8,0:8:10.21:57,10,0	0/1:20,1:21:69.37:155,0,69	0/1:26,5:30:16.17:78,0,16	1/1:8,0:7:10.02:35,10,0	0/1:12,1:13:47.55:65,0,48	0/1:15,0:14:62.29:62,0,92	1/1:7,1:8:11.73:65,12,0	0/1:18,0:17:8.78:181,0,9	0/1:17,0:16:6.32:169,0,6	0/1:9,0:9:43.90:69,0,44	0/0:14,0:12:28.90:0,29,286	0/1:14,0:13:31.58:63,0,32	0/0:36,0:35:92.16:0,92,1449	0/1:17,0:17:8.69:75,0,9	0/0:10,0:9:22.07:0,22,278	0/0:9,0:9:17.70:0,18,175	0/0:40,0:36:19.28:0,19,622	0/1:10,1:10:29.97:30,0,40	1/1:13,0:12:3.43:52,3,0	0/1:36,0:34:29.98:272,0,30	1/1:19,0:18:2.58:34,3,0	0/1:16,1:15:18.43:18,0,145	0/0:17,0:17:27.47:0,27,379	0/1:6,0:5:28.25:38,0,28
chr10	45983748	.	TG	T	1498.78	PASS	AB=0.888;AC=29;AF=0.518;AN=56;BaseQRankSum=6.175;DP=529;FS=0.453;HRun=2;HaplotypeScore=119.3056;InbreedingCoeff=0.1060;MQ=48.17;MQ0=29;MQRankSum=3.215;QD=4.58;ReadPosRankSum=0.174;VQSLOD=0.3228;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:31,5:34:15.74:241,16,0	0/0:3,0:3:8.39:0,8,88	0/0:50,0:10:23.52:0,24,300	0/0:41,0:5:5.71:0,6,79	1/1:7,0:7:9.86:52,10,0	0/1:15,6:21:62.66:161,0,63	0/1:20,10:30:15.75:73,0,16	1/1:8,0:7:4.92:19,5,0	0/1:12,0:12:26.49:67,0,26	0/1:14,1:14:68.50:68,0,75	1/1:6,2:8:12.19:65,12,0	1/1:19,0:18:9.26:150,9,0	0/1:15,2:16:7.23:130,0,7	0/1:7,2:9:29.82:64,0,30	0/0:15,0:13:34.58:0,35,349	0/1:12,2:14:27.09:82,0,27	0/0:35,0:34:94.16:0,94,1182	1/1:12,4:16:0.36:105,0,0	0/0:10,0:9:19.91:0,20,242	0/0:9,0:9:17.54:0,18,195	0/0:38,1:35:19.32:0,19,649	0/1:7,3:10:21.02:33,0,21	1/1:13,0:12:2.89:39,3,0	1/1:30,5:33:29.37:232,29,0	1/1:17,2:18:2.73:35,3,0	0/1:15,1:14:22.96:23,0,111	0/1:16,0:16:2.58:3,0,292	0/1:6,0:5:28.25:38,0,28
chr10	45983749	.	G	GGT	5617.72	PASS	AB=0.724;AC=34;AF=0.607;AN=56;BaseQRankSum=3.775;DP=522;FS=0.000;HRun=0;HaplotypeScore=110.4495;InbreedingCoeff=0.6617;MQ=48.78;MQ0=29;MQRankSum=1.059;QD=18.48;ReadPosRankSum=-0.641;VQSLOD=4.4813;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:30,1:30:56.79:714,57,0	0/0:3,0:3:9.02:0,9,105	0/0:50,0:10:26.53:0,27,275	0/0:41,0:5:5.96:0,6,44	1/1:4,2:6:11.91:157,12,0	0/1:11,10:21:12.67:255,0,13	1/1:28,0:28:11.82:165,12,0	1/1:8,0:7:21.07:298,21,0	1/1:10,2:12:27.44:355,27,0	0/1:5,11:15:4.95:435,0,5	1/1:9,0:9:15.05:225,15,0	1/1:17,2:18:31.57:273,32,0	1/1:16,1:16:38.34:452,38,0	1/1:8,1:9:18.06:242,18,0	0/0:15,0:13:8.58:0,9,329	1/1:4,10:14:12.04:172,12,0	0/0:35,0:34:92.85:0,93,1092	1/1:4,12:17:15.52:241,16,0	0/0:11,0:10:17.91:0,18,183	0/0:9,0:9:18.05:0,18,216	0/0:38,0:34:53.76:0,54,644	1/1:9,1:10:11.99:155,12,0	1/1:13,0:12:17.91:215,18,0	1/1:33,2:33:68.31:719,68,0	1/1:7,11:17:2.89:35,3,0	0/1:6,9:13:2.44:349,0,2	0/0:16,0:16:23.50:0,23,246	0/1:6,0:5:19.51:160,0,20
chr10	45983759	.	T	TGT	5618.03	PASS	AB=1.000;AC=34;AF=0.607;AN=56;BaseQRankSum=3.816;DP=523;FS=0.000;HRun=0;HaplotypeScore=104.0607;InbreedingCoeff=0.6705;MQ=55.66;MQ0=21;MQRankSum=0.838;QD=18.48;ReadPosRankSum=-0.928;VQSLOD=4.2182;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:29:56.79:714,57,0	0/0:4,0:4:9.02:0,9,105	0/0:52,0:12:26.53:0,27,275	0/0:47,0:11:5.37:0,5,43	1/1:6,0:6:11.91:157,12,0	0/1:24,0:24:12.67:255,0,13	1/1:19,9:29:13.07:168,13,0	1/1:10,0:10:21.07:298,21,0	1/1:11,0:11:26.97:354,27,0	0/1:15,0:15:4.95:435,0,5	1/1:11,0:11:15.05:225,15,0	1/1:20,0:19:31.57:273,32,0	1/1:16,0:15:38.34:452,38,0	1/1:8,0:8:18.06:242,18,0	0/0:15,0:13:32.84:0,33,356	1/1:17,0:17:12.04:172,12,0	0/0:35,0:35:92.85:0,93,1092	1/1:20,0:20:15.05:240,15,0	0/0:11,0:10:17.94:0,18,183	0/0:9,0:9:18.05:0,18,216	0/0:33,0:32:53.76:0,54,644	1/1:9,0:9:11.99:155,12,0	1/1:8,0:7:17.91:215,18,0	1/1:32,0:32:68.31:719,68,0	1/1:17,0:17:2.89:35,3,0	0/1:15,0:13:2.44:349,0,2	0/0:13,0:13:23.52:0,24,246	0/1:6,0:6:19.51:160,0,20
chr10	45991146	.	A	AT	725.90	PASS	AB=1.000;AC=14;AF=0.250;AN=56;BaseQRankSum=4.633;DP=229;FS=1.704;HRun=2;HaplotypeScore=26.5550;InbreedingCoeff=0.7477;MQ=66.26;MQ0=2;MQRankSum=0.862;QD=10.67;ReadPosRankSum=1.528;VQSLOD=1.7384;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:15,0:15:5.57:83,0,6	0/0:3,0:3:8.94:0,9,91	0/0:5,0:5:15.04:0,15,168	0/0:3,0:4:6.79:0,7,48	0/0:11,0:10:30.08:0,30,358	0/0:10,0:10:21.26:0,21,325	0/0:5,0:4:8.96:0,9,92	1/1:0,14:14:42.05:539,42,0	1/1:11,0:11:24.57:92,25,0	0/0:7,0:7:21.01:0,21,241	0/0:12,0:12:33.10:0,33,405	1/1:6,0:6:14.35:50,14,0	1/1:9,0:9:13.80:66,14,0	0/0:7,0:7:17.98:0,18,192	0/0:4,0:4:12.04:0,12,148	0/0:8,0:8:24.02:0,24,278	0/0:12,0:12:33.04:0,33,387	0/0:9,0:9:20.98:0,21,239	0/0:10,0:10:27.07:0,27,322	0/0:8,0:8:18.06:0,18,221	0/0:3,0:3:5.99:0,6,50	0/1:3,0:3:8.74:14,0,9	1/1:7,0:6:9.91:38,10,0	1/1:3,0:3:7.09:26,7,0	0/0:13,0:12:36.05:0,36,426	0/0:7,0:7:18.05:0,18,214	0/0:15,0:15:45.09:0,45,536	0/0:8,0:8:24.04:0,24,280
chr10	45991148	.	T	TA	1388.48	PASS	AB=0.909;AC=17;AF=0.304;AN=56;BaseQRankSum=-3.746;DP=241;FS=2.814;HRun=9;HaplotypeScore=25.1279;InbreedingCoeff=0.8225;MQ=66.37;MQ0=1;MQRankSum=0.222;QD=16.93;ReadPosRankSum=2.112;VQSLOD=2.8666;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,13:16:10.08:339,10,0	0/0:4,0:4:8.97:0,9,73	0/0:5,0:5:14.99:0,15,129	0/0:4,0:4:6.31:0,6,38	0/0:11,0:10:29.99:0,30,260	0/1:9,1:10:3.18:3,0,204	0/0:5,0:5:11.95:0,12,96	1/1:15,0:15:32.31:166,32,0	1/1:0,13:13:30.08:332,30,0	0/0:8,0:8:17.98:0,18,156	0/0:13,0:13:38.90:0,39,326	1/1:0,6:6:18.05:199,18,0	1/1:1,8:9:5.64:244,6,0	0/0:8,0:8:20.96:0,21,175	0/0:5,0:5:11.99:0,12,104	0/0:8,0:8:20.99:0,21,182	0/0:13,0:13:32.97:0,33,283	0/0:10,0:10:23.95:0,24,201	0/0:10,0:10:26.99:0,27,234	0/0:8,0:8:20.97:0,21,179	0/0:3,0:3:6:0,6,52	1/1:1,2:3:6.01:64,6,0	1/1:0,7:6:12.03:133,12,0	1/1:0,3:3:9.02:100,9,0	0/0:14,0:13:35.98:0,36,309	0/0:7,0:7:20.99:0,21,180	0/0:15,0:15:44.99:0,45,390	0/0:7,0:8:23.03:0,23,188
chr10	45991489	.	AC	A	7718.56	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=13.540;DP=667;FS=7.215;HRun=1;HaplotypeScore=63.5972;InbreedingCoeff=0.9997;MQ=92.57;MQ0=0;MQRankSum=-3.671;QD=36.76;ReadPosRankSum=2.397;VQSLOD=5.2257;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,38:38:96.32:1342,96,0	0/0:10,0:10:30.10:0,30,476	0/0:30,0:30:87.27:0,87,1343	0/0:27,0:27:74.80:0,75,1094	0/0:32,0:32:90.25:0,90,1375	1/1:0,29:29:75.25:1043,75,0	1/1:0,17:17:48.16:671,48,0	0/0:35,0:35:99:0,102,1622	1/1:0,18:18:48.16:671,48,0	0/0:27,0:27:75.24:0,75,1156	0/0:23,0:23:69.20:0,69,1064	1/1:0,21:21:57.19:796,57,0	1/1:0,24:24:69.23:965,69,0	0/0:21,0:21:63.21:0,63,1006	0/0:27,0:27:81.28:0,81,1293	0/0:22,0:22:66.22:0,66,1037	0/0:13,0:13:39.11:0,39,597	0/0:25,0:24:69.20:0,69,1075	0/0:23,0:23:69.22:0,69,1054	0/0:15,0:15:45.14:0,45,692	0/0:39,0:39:99:0,117,1792	1/1:0,26:26:60.20:822,60,0	1/1:0,26:26:75.25:1032,75,0	1/1:0,11:11:27.09:377,27,0	0/0:23,0:23:69.24:0,69,1098	0/0:25,0:25:75.21:0,75,1163	0/0:28,0:28:84.26:0,84,1314	0/0:12,0:12:33.11:0,33,492
chr10	45991702	.	TTGTC	T	13738.39	PASS	AB=0.579;AC=42;AF=0.750;AN=56;BaseQRankSum=1.200;DP=681;FS=17.178;HRun=0;HaplotypeScore=147.8307;InbreedingCoeff=0.2683;MQ=60.96;MQ0=3;MQRankSum=1.974;QD=22.38;ReadPosRankSum=4.033;VQSLOD=3.7733;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:8,0:26:12.69:92,0,13	1/1:4,10:14:26.98:431,27,0	0/0:19,0:15:26.25:0,26,426	0/0:15,0:16:20.95:0,21,342	1/1:4,26:30:69.18:1080,69,0	1/1:7,0:24:15.13:213,15,0	0/1:3,0:23:42.07:134,0,42	1/1:11,19:30:57.16:848,57,0	0/1:3,0:15:15.66:148,0,16	1/1:14,19:33:63.17:940,63,0	1/1:11,17:28:45.04:679,45,0	0/1:4,0:26:16.11:213,0,16	0/1:5,0:11:2.79:48,0,3	1/1:4,21:25:57.19:937,57,0	1/1:5,26:31:51.17:838,51,0	1/1:6,10:16:24.08:395,24,0	0/0:32,0:32:66.11:0,66,1352	1/1:6,17:22:22.15:621,22,0	1/1:8,18:25:53.18:845,53,0	1/1:7,27:34:78.19:1192,78,0	1/1:4,20:24:42.14:690,42,0	0/1:3,0:24:13.53:166,0,14	0/1:4,0:25:7.85:147,0,8	1/1:6,0:17:12.02:113,12,0	1/1:11,21:32:42.14:690,42,0	1/1:7,22:29:66.21:1059,66,0	1/1:7,29:36:63.60:1035,64,0	0/1:6,5:11:58.26:182,0,58
chr10	45993421	.	AT	A	4529.14	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=14.407;DP=606;FS=2.382;HRun=10;HaplotypeScore=66.0673;InbreedingCoeff=0.9908;MQ=79.00;MQ0=0;MQRankSum=-1.520;QD=21.16;ReadPosRankSum=4.862;VQSLOD=5.6330;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,38:44:99:911,105,0	0/0:13,0:13:33.09:0,33,365	0/0:19,0:18:12.32:0,12,277	0/0:13,0:13:20.86:0,21,197	0/0:29,0:29:75.17:0,75,812	1/1:5,28:33:80.97:701,81,0	1/1:3,11:14:13.38:264,13,0	0/0:29,0:30:71.99:0,72,754	1/1:0,12:13:35.03:292,35,0	0/0:28,0:28:75.16:0,75,795	0/0:22,0:22:48.13:0,48,531	1/1:3,24:27:54.07:558,54,0	1/1:1,17:18:47.95:410,48,0	0/0:14,0:14:42.10:0,42,454	0/0:18,0:18:48.11:0,48,522	0/0:15,0:15:42.10:0,42,456	0/0:28,0:28:81.20:0,81,885	0/0:11,0:11:24.02:0,24,251	0/0:20,0:20:48.13:0,48,530	0/0:25,0:25:72.17:0,72,780	0/0:16,0:16:45.11:0,45,489	1/1:2,14:16:38.99:339,39,0	1/1:1,23:24:68.90:585,69,0	1/1:6,19:25:53.97:469,54,0	0/0:18,0:18:42.11:0,42,457	0/0:27,0:27:66.17:0,66,723	0/0:32,0:31:93.19:0,93,992	0/0:14,0:14:39.10:0,39,427
chr10	45993841	.	GGAA	G	4711.06	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=4.354;DP=358;FS=14.500;HRun=0;HaplotypeScore=67.8458;InbreedingCoeff=0.9172;MQ=79.26;MQ0=2;MQRankSum=-5.442;QD=38.62;ReadPosRankSum=1.826;VQSLOD=5.0156;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,17:24:66.13:944,66,0	0/0:6,0:6:18.06:0,18,350	0/0:19,0:16:26.17:0,26,584	0/0:25,0:21:0.84:0,1,513	0/0:12,0:12:24.08:0,24,499	1/1:3,14:17:45.15:694,45,0	1/1:2,15:17:48.09:702,48,0	0/0:16,0:16:33.10:0,33,607	1/1:3,9:12:30.10:461,30,0	0/0:10,0:10:24.07:0,24,476	0/0:8,0:8:24.08:0,24,514	1/1:3,7:10:24.08:365,24,0	1/1:4,5:9:27.08:392,27,0	0/0:10,0:10:27.09:0,27,561	0/0:14,0:14:33.09:0,33,600	0/0:17,0:17:39.13:0,39,786	0/0:11,0:11:24.06:0,24,474	0/0:6,0:6:18.06:0,18,383	0/0:17,0:17:42.14:0,42,841	0/0:13,0:13:30.10:0,30,618	0/0:14,0:13:33.10:0,33,644	1/1:3,15:18:51.16:756,51,0	1/1:1,3:4:9.03:139,9,0	1/1:6,5:11:18.05:257,18,0	0/0:7,0:7:12.04:0,12,258	0/0:16,0:16:39.13:0,39,806	0/0:12,0:12:27.09:0,27,580	0/0:1,0:1:3.01:0,3,64
chr10	45993890	.	G	GA	8314.46	PASS	AB=0.600;AC=49;AF=0.875;AN=56;BaseQRankSum=-4.603;DP=376;FS=3.515;HRun=0;HaplotypeScore=48.0115;InbreedingCoeff=0.6834;MQ=61.87;MQ0=9;MQRankSum=0.373;QD=26.73;ReadPosRankSum=3.908;VQSLOD=5.6110;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,27:31:81.04:1010,81,0	1/1:2,2:4:3:43,3,0	0/0:31,0:8:9.55:0,10,82	0/0:28,0:11:13.82:0,14,137	1/1:1,7:7:11.97:147,12,0	1/1:4,10:13:25.08:391,25,0	1/1:7,11:17:42.02:491,42,0	1/1:6,7:12:21:241,21,0	1/1:0,5:5:15.05:208,15,0	1/1:0,7:7:20.95:230,21,0	1/1:2,7:9:14.98:188,15,0	1/1:6,18:23:51.15:710,51,0	1/1:2,9:11:27.09:385,27,0	1/1:3,15:18:51.15:676,51,0	1/1:5,15:19:29.77:428,30,0	1/1:2,14:16:24.23:452,24,0	0/0:6,0:5:9:0,9,90	1/1:1,4:5:8.70:97,9,0	0/1:3,6:8:4.71:141,0,5	1/1:1,11:12:20.91:250,21,0	1/1:3,20:22:51.17:702,51,0	1/1:3,12:15:33:414,33,0	1/1:2,2:2:5.61:52,6,0	1/1:3,7:10:20.99:239,21,0	1/1:2,7:9:15.04:206,15,0	1/1:1,8:10:20.88:195,21,0	1/1:1,10:11:24.07:332,24,0	1/1:0,4:4:6.02:85,6,0
chr10	45994499	.	CA	C	378.16	PASS	AB=0.732;AC=8;AF=0.143;AN=56;BaseQRankSum=-1.906;DP=520;FS=0.000;HRun=16;HaplotypeScore=110.6200;InbreedingCoeff=0.1589;MQ=74.18;MQ0=4;MQRankSum=2.270;QD=3.64;ReadPosRankSum=3.610;VQSLOD=0.7561;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:24:26.57:0,27,187	0/1:4,5:9:16.47:27,0,16	0/0:49,1:21:21.07:0,21,98	0/0:30,1:18:11.89:0,12,69	0/0:29,0:29:40.31:0,40,230	0/0:9,1:20:18.83:0,19,210	0/0:4,0:15:40.42:0,40,232	0/0:25,0:24:37.49:0,37,196	0/0:15,1:16:26.58:0,27,187	0/1:11,0:11:8.41:8,0,57	0/0:12,0:12:14.54:0,15,73	0/0:12,0:12:26.50:0,26,178	0/0:14,0:14:29.62:0,30,208	0/0:16,0:16:16.12:0,16,99	0/1:6,10:17:2.56:91,0,3	0/0:13,0:13:19.68:0,20,106	0/0:13,1:16:10.67:0,11,165	0/0:20,0:20:13.14:0,13,146	0/1:9,4:15:3.39:78,0,3	0/1:13,14:28:51.25:172,0,51	0/1:5,1:7:15.81:16,0,17	0/0:7,0:16:0.15:0,0,74	0/0:9,1:23:17.29:0,17,176	0/0:1,0:7:0:0,0,0	0/0:20,0:21:3.78:0,4,17	0/0:20,0:20:11.95:0,12,97	1/1:4,11:17:2.45:112,2,0	0/0:14,0:15:4.70:0,5,78
chr10	45994514	.	AACC	A	2684.35	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=2.380;DP=483;FS=6.009;HRun=0;HaplotypeScore=99.3270;InbreedingCoeff=0.7521;MQ=71.49;MQ0=3;MQRankSum=-3.450;QD=12.20;ReadPosRankSum=-4.020;VQSLOD=2.1175;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:29.11:0,29,402	0/0:8,0:8:14.62:0,15,200	0/0:51,0:20:16.85:0,17,408	0/1:27,0:14:7.65:8,0,296	1/1:28,0:28:65.10:570,65,0	0/0:16,0:16:41.90:0,42,590	0/0:17,0:17:44.96:0,45,629	0/1:32,0:31:30.49:30,0,973	0/0:12,0:12:32.96:0,33,505	1/1:13,0:13:31.81:336,32,0	1/1:10,0:10:14.94:175,15,0	0/0:10,0:10:3.46:0,3,295	0/0:14,0:14:36.03:0,36,559	1/1:13,0:13:23.80:266,24,0	0/0:14,0:14:30.05:0,30,336	1/1:10,1:11:26.39:196,26,0	0/1:17,0:17:1.06:1,0,500	1/1:18,1:19:47.76:402,48,0	0/0:14,0:14:26.07:0,26,338	0/0:21,0:21:60.09:0,60,680	0/0:6,0:6:14.89:0,15,177	0/0:14,0:14:20.50:0,21,297	0/0:21,0:21:28.22:0,28,533	0/0:6,0:6:0:0,0,0	1/1:19,1:20:10.81:102,11,0	1/1:20,1:21:61.99:637,62,0	0/0:16,0:16:35.46:0,35,342	1/1:9,0:9:17.96:166,18,0
chr10	45994515	.	ACC	A	3904.82	PASS	AB=0.985;AC=20;AF=0.370;AN=54;BaseQRankSum=1.655;DP=476;FS=4.318;HRun=2;HaplotypeScore=87.6140;InbreedingCoeff=0.8230;MQ=74.57;MQ0=3;MQRankSum=-3.371;QD=20.66;ReadPosRankSum=-2.841;VQSLOD=0.6804;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:21:29.47:0,29,354	0/0:9,0:9:17.59:0,18,255	0/0:51,1:22:18.54:0,19,466	0/0:27,0:15:6.68:0,7,322	1/1:23,5:28:81.01:804,81,0	0/0:16,0:16:43.92:0,44,508	0/0:16,0:16:45.12:0,45,522	0/1:31,1:31:48.40:48,0,951	0/0:11,0:11:33.08:0,33,425	1/1:8,3:13:34.35:436,34,0	1/1:9,0:10:25.87:298,26,0	0/0:10,0:10:2.77:0,3,253	0/0:14,0:14:36.01:0,36,465	1/1:11,1:12:34.74:365,35,0	0/0:14,0:14:29.99:0,30,345	1/1:9,2:11:29.62:295,30,0	0/1:16,0:16:0.98:1,0,444	1/1:16,1:19:52.18:551,52,0	0/0:13,0:13:31.36:0,31,387	0/0:21,0:21:59.82:0,60,710	0/0:5,0:5:15:0,15,164	0/0:12,0:12:20.39:0,20,265	0/0:22,0:22:43.82:0,44,551	./.	1/1:2,18:20:11.97:132,12,0	1/1:16,4:21:63.08:754,63,0	0/0:16,0:16:35.45:0,35,350	1/1:4,2:7:18.05:220,18,0
chr10	45994832	.	CT	C	1261.56	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=8.991;DP=727;FS=2.259;HRun=1;HaplotypeScore=72.2875;InbreedingCoeff=0.9842;MQ=86.23;MQ0=0;MQRankSum=-2.323;QD=38.23;ReadPosRankSum=-2.387;VQSLOD=3.3171;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,108,1697	0/0:12,0:12:36.11:0,36,553	0/0:26,0:26:75.24:0,75,1144	0/0:27,0:27:78.22:0,78,1180	0/0:28,0:28:81.26:0,81,1259	0/0:21,0:21:63.21:0,63,997	0/0:24,0:24:72.23:0,72,1124	1/1:0,33:33:99:1356,99,0	0/0:34,0:34:99:0,99,1560	0/0:35,0:35:99:0,105,1594	0/0:19,0:19:45.15:0,45,719	0/0:34,0:34:99:0,102,1605	0/0:31,0:31:93.30:0,93,1462	0/0:25,0:25:75.26:0,75,1197	0/0:37,0:37:99:0,111,1767	0/0:29,0:29:87.30:0,87,1389	0/0:23,0:23:69.20:0,69,1056	0/0:6,0:6:15.05:0,15,240	0/0:26,0:25:75.26:0,75,1193	0/0:29,0:29:78.22:0,78,1209	0/0:38,0:38:99:0,111,1717	0/0:17,0:17:51.17:0,51,813	0/0:18,0:18:51.13:0,51,742	0/0:30,0:29:84.29:0,84,1343	0/0:13,0:13:36.12:0,36,575	0/0:26,0:26:75.21:0,75,1171	0/0:33,0:33:96.33:0,96,1533	0/0:16,0:16:42.12:0,42,645
chr10	45995160	.	ATT	A	3580.97	PASS	AB=0.824;AC=49;AF=0.875;AN=56;BaseQRankSum=-1.005;DP=355;FS=15.543;HRun=16;HaplotypeScore=53.0341;InbreedingCoeff=0.3948;MQ=75.83;MQ0=16;MQRankSum=0.548;QD=10.79;ReadPosRankSum=3.057;VQSLOD=0.9810;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:10,14:18:21.47:274,21,0	1/1:2,4:5:11.98:100,12,0	0/1:15,0:11:9.78:10,0,49	0/0:14,0:10:10.15:0,10,70	1/1:3,10:15:10.85:174,11,0	1/1:5,8:12:26.70:212,27,0	1/1:2,2:4:7.81:55,8,0	1/1:10,0:18:13.15:58,13,0	1/1:3,6:9:14.94:124,15,0	1/1:7,9:17:26.46:212,26,0	1/1:3,11:14:26.84:225,27,0	1/1:7,8:17:23.41:173,23,0	1/1:5,7:12:14.93:124,15,0	1/1:4,1:5:5.91:49,6,0	0/1:6,5:10:7.21:63,0,7	1/1:3,10:14:23.61:187,24,0	0/0:6,0:8:16.69:0,17,134	1/1:4,3:9:17.43:123,17,0	0/1:8,2:11:11.93:37,0,12	1/1:6,12:18:1.46:173,1,0	1/1:9,7:15:14.81:125,15,0	1/1:4,3:6:5.96:50,6,0	1/1:3,8:9:23.96:199,24,0	1/1:2,3:4:8.99:75,9,0	1/1:5,12:18:25.60:210,26,0	1/1:2,8:10:14.85:166,15,0	1/1:2,9:11:20.78:175,21,0	1/1:3,9:12:20.56:204,21,0
chr10	45997230	.	C	CG	246.68	PASS	AC=2;AF=0.038;AN=52;BaseQRankSum=-3.208;DP=406;FS=2.837;HRun=1;HaplotypeScore=73.5420;InbreedingCoeff=0.8687;MQ=43.19;MQ0=20;MQRankSum=0.667;QD=18.98;ReadPosRankSum=-0.289;VQSLOD=3.7631;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:29:59.97:0,60,655	0/0:6,0:6:12.04:0,12,151	./.	./.	0/0:20,0:20:45.12:0,45,538	0/0:17,0:17:33.10:0,33,412	0/0:14,0:13:17.99:0,18,210	0/0:12,0:11:24.06:0,24,283	0/0:10,0:10:21.03:0,21,252	0/0:15,0:12:30.05:0,30,356	0/0:15,0:15:30.08:0,30,364	0/0:15,0:15:32.59:0,33,383	0/0:13,0:13:30.03:0,30,340	0/0:16,0:16:29.95:0,30,334	1/1:3,10:13:26.71:340,27,0	0/0:11,0:11:33.06:0,33,365	0/0:26,0:26:25.69:0,26,563	0/0:13,0:13:30.06:0,30,362	0/0:19,0:19:45.05:0,45,524	0/0:20,0:20:36.07:0,36,433	0/0:10,0:9:20.91:0,21,212	0/0:16,0:16:33.08:0,33,398	0/0:10,0:9:8.71:0,9,104	0/0:21,0:19:33.01:0,33,369	0/0:11,0:11:30.09:0,30,376	0/0:19,0:18:48.15:0,48,607	0/0:14,0:13:30.02:0,30,287	0/0:9,0:5:12.03:0,12,153
chr10	45997257	.	AAAAAG	A	622.58	PASS	AB=0.974;AC=14;AF=0.250;AN=56;BaseQRankSum=2.613;DP=535;FS=24.807;HRun=0;HaplotypeScore=105.4178;InbreedingCoeff=-0.1937;MQ=50.61;MQ0=25;MQRankSum=2.649;QD=2.36;ReadPosRankSum=1.260;VQSLOD=-0.3486;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:40,1:37:54.16:318,0,54	0/0:11,0:11:5.79:0,6,288	0/1:25,0:6:17.83:18,0,76	0/1:26,0:8:22.49:22,0,54	0/0:20,0:19:31.04:0,31,270	0/1:23,0:22:14.38:40,0,14	0/1:18,0:17:50.03:50,0,63	0/0:24,0:23:38.73:0,39,403	0/1:14,0:14:26.32:69,0,26	0/1:12,0:11:9.39:9,0,105	0/0:10,0:9:8.97:0,9,93	0/1:21,0:21:7.11:7,0,46	0/0:17,0:16:5.78:0,6,39	0/0:20,0:20:23.81:0,24,189	0/0:14,0:14:39.07:0,39,477	0/0:8,0:8:20.84:0,21,182	0/0:32,0:29:57.79:0,58,1051	0/0:17,0:17:34.05:0,34,261	0/0:19,0:18:24.14:0,24,481	0/0:32,0:31:28.63:0,29,479	0/1:10,0:9:30.56:31,0,115	0/1:19,0:19:15.92:50,0,16	0/1:10,7:16:18.17:18,0,64	1/1:19,1:19:5.37:92,5,0	0/0:22,0:22:44.43:0,44,525	0/0:17,0:17:2.75:0,3,239	0/1:18,0:18:50.87:51,0,272	0/0:8,0:7:10.87:0,11,105
chr10	45997258	.	AAAAG	A	1406.53	PASS	AB=0.992;AC=25;AF=0.446;AN=56;BaseQRankSum=0.350;DP=527;FS=18.722;HRun=0;HaplotypeScore=93.9246;InbreedingCoeff=0.2499;MQ=53.84;MQ0=25;MQRankSum=1.206;QD=3.98;ReadPosRankSum=1.408;VQSLOD=0.6958;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:28,9:33:63.65:627,64,0	0/0:11,0:11:3.82:0,4,174	0/1:28,0:8:3.53:4,0,72	0/1:27,0:9:6.95:7,0,72	0/1:16,0:15:3.31:3,0,102	1/1:8,14:21:14.32:160,14,0	1/1:7,11:17:8.22:97,8,0	0/0:22,0:21:31.37:0,31,311	1/1:5,8:13:14.26:160,14,0	0/1:13,0:12:8.99:9,0,109	0/0:10,0:9:5.97:0,6,44	1/1:19,0:20:2.10:43,2,0	0/0:16,0:15:0:0,0,1	0/0:20,0:20:20.18:0,20,151	0/0:14,0:14:37.17:0,37,269	0/0:9,0:9:19.99:0,20,148	0/0:33,0:30:57.28:0,57,888	0/0:18,0:18:31.96:0,32,190	0/1:19,0:18:4.22:4,0,248	0/1:33,0:32:18.55:19,0,233	0/1:9,1:9:50.33:67,0,50	1/1:7,12:19:14.40:130,14,0	0/1:16,0:15:0.02:28,0,0	1/1:8,12:19:8.09:89,8,0	0/0:21,0:21:41.08:0,41,354	0/1:16,0:16:1.31:1,0,153	0/1:19,0:19:99:125,0,133	0/1:7,0:6:6.54:7,0,69
chr10	45997259	.	AAAG	A	1240.96	PASS	AB=0.949;AC=24;AF=0.429;AN=56;BaseQRankSum=2.586;DP=491;FS=13.901;HRun=0;HaplotypeScore=82.7844;InbreedingCoeff=0.3340;MQ=55.66;MQ0=22;MQRankSum=1.998;QD=4.29;ReadPosRankSum=2.569;VQSLOD=0.9363;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:29,4:30:61.59:540,62,0	0/1:12,0:12:22.61:23,0,96	0/0:28,0:8:3.54:0,4,68	0/1:27,0:9:3.46:3,0,75	0/0:17,0:16:16.48:0,16,104	1/1:18,1:18:11.78:118,12,0	1/1:14,0:14:5.76:55,6,0	0/0:21,0:20:6.38:0,6,250	1/1:13,0:13:12.03:96,12,0	0/0:13,0:12:8.79:0,9,143	0/0:10,0:9:8.49:0,8,49	1/1:7,9:16:2.77:29,3,0	0/1:4,9:12:0.02:0,0,0	0/0:17,0:17:10.09:0,10,123	0/0:15,0:15:15.57:0,16,165	0/0:9,0:9:16.02:0,16,141	0/0:33,0:30:45.13:0,45,656	0/1:16,0:16:4.63:5,0,93	0/1:18,0:17:27.23:27,0,138	0/1:31,0:30:78.21:88,0,78	0/1:10,0:9:23.96:57,0,24	1/1:18,0:18:11.01:84,11,0	1/1:13,1:13:7.98:51,8,0	1/1:15,1:15:8.56:93,9,0	0/0:20,0:20:32.92:0,33,264	0/0:13,0:13:12.71:0,13,147	0/1:19,0:19:35.30:150,0,35	0/0:6,0:6:2:0,2,26
chr10	45997260	.	AAG	A	1439.88	PASS	AB=1.000;AC=28;AF=0.500;AN=56;BaseQRankSum=2.156;DP=480;FS=8.168;HRun=0;HaplotypeScore=75.7941;InbreedingCoeff=0.6501;MQ=56.72;MQ0=22;MQRankSum=0.978;QD=5.14;ReadPosRankSum=2.234;VQSLOD=1.5897;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:32,1:30:62.67:488,63,0	0/1:13,0:13:1.78:63,0,2	0/1:28,0:9:0.59:1,0,89	0/0:28,0:11:2.72:0,3,127	0/0:16,0:15:8.57:0,9,62	1/1:18,0:17:11.86:85,12,0	1/1:13,0:13:5.96:44,6,0	0/0:21,0:20:14.15:0,14,232	1/1:11,0:11:8.95:68,9,0	0/0:12,0:11:17.99:0,18,155	0/0:11,0:10:8.48:0,8,54	1/1:16,0:16:2.98:22,3,0	0/1:11,0:10:0.01:0,0,0	0/0:16,0:16:15.97:0,16,144	0/1:15,0:15:6.84:27,0,7	0/0:9,0:9:16.71:0,17,130	0/0:32,0:29:39.91:0,40,488	0/0:15,0:15:18.24:0,18,97	1/1:16,1:16:3.97:97,4,0	1/1:27,3:29:32.95:224,33,0	1/1:10,0:9:7.48:102,7,0	1/1:17,0:17:11.86:80,12,0	1/1:13,0:12:5.88:37,6,0	1/1:15,0:14:8.95:67,9,0	0/0:20,0:20:28.68:0,29,203	0/0:13,0:13:15.46:0,15,156	1/1:19,0:19:27.29:224,27,0	0/0:6,0:6:2.94:0,3,18
chr10	45997261	.	AG	A	1590.01	PASS	AB=1.000;AC=26;AF=0.464;AN=56;BaseQRankSum=0.663;DP=464;FS=2.666;HRun=1;HaplotypeScore=67.9729;InbreedingCoeff=0.7553;MQ=57.90;MQ0=23;MQRankSum=-0.246;QD=6.88;ReadPosRankSum=1.238;VQSLOD=0.7901;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:32,0:29:39.18:389,39,0	1/1:8,3:11:22.13:139,22,0	0/0:31,0:10:6.08:0,6,94	0/0:29,0:11:12.32:0,12,142	0/0:16,0:15:25.16:0,25,144	1/1:17,0:16:3.94:53,4,0	0/1:13,0:13:1.40:25,0,1	0/0:21,0:20:15.36:0,15,235	0/1:11,0:11:0.35:39,0,0	0/0:11,0:10:18.76:0,19,155	0/0:12,0:11:17.82:0,18,131	1/1:16,0:16:2.94:18,3,0	0/1:11,0:10:0.13:0,0,0	0/0:16,0:16:22.85:0,23,163	1/1:10,0:10:18.66:111,19,0	0/0:9,0:9:23.40:0,23,163	0/0:29,0:26:38.68:0,39,406	0/0:16,0:16:31.09:0,31,180	1/1:9,5:13:14.95:186,15,0	1/1:8,15:22:29.61:285,30,0	1/1:11,0:10:12.51:152,13,0	0/1:17,0:17:1.54:59,0,2	1/1:13,0:12:6.23:38,6,0	1/1:15,0:14:8.77:52,9,0	0/0:20,0:20:43.04:0,43,286	0/0:13,0:13:25.49:0,25,188	1/1:16,1:17:26.08:244,26,0	0/0:10,0:10:16.67:0,17,113
chr10	46000968	.	TCC	T	1481.11	PASS	AB=0.723;AC=38;AF=0.731;AN=52;BaseQRankSum=6.847;DP=363;FS=0.000;HRun=2;HaplotypeScore=97.3565;InbreedingCoeff=0.4718;MQ=40.45;MQ0=36;MQRankSum=-2.357;QD=5.88;ReadPosRankSum=1.351;VQSLOD=-0.0644;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:6,2:7:1.41:0,1,2	1/1:7,0:7:7.39:36,7,0	0/0:22,0:3:8.23:0,8,68	0/0:19,1:9:21.06:0,21,238	0/0:8,0:15:0.08:0,0,0	1/1:6,5:10:4.20:67,4,0	1/1:0,1:8:3:29,3,0	1/1:14,0:10:2.60:10,3,0	1/1:4,5:9:8.48:88,8,0	0/0:4,0:7:0.46:0,0,1	./.	1/1:8,3:12:2.51:21,3,0	1/1:0,1:6:3:29,3,0	1/1:11,2:13:14.34:142,14,0	1/1:6,6:19:3.94:157,4,0	1/1:10,2:16:5.21:73,5,0	0/0:31,0:31:88.80:0,89,1246	1/1:12,1:14:11.30:117,11,0	1/1:12,2:11:19.88:216,20,0	1/1:7,4:11:7.73:117,8,0	1/1:6,2:20:5.01:30,5,0	./.	1/1:5,3:8:0.47:1,0,0	0/1:9,2:11:0.47:1,0,0	1/1:5,1:9:2.91:41,3,0	0/1:6,1:15:0.41:171,0,0	1/1:4,6:10:16.71:132,17,0	1/1:7,1:8:17.78:134,18,0
chr10	46000972	.	TCC	T	993.78	PASS	AB=0.840;AC=24;AF=0.462;AN=52;BaseQRankSum=8.660;DP=333;FS=3.550;HRun=2;HaplotypeScore=94.6611;InbreedingCoeff=0.0777;MQ=40.97;MQ0=35;MQRankSum=-2.673;QD=4.78;ReadPosRankSum=3.336;VQSLOD=-0.2237;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:6:2.66:0,3,5	0/0:4,0:6:4.24:0,4,30	0/0:16,0:3:5.23:0,5,51	0/0:14,0:6:15.02:0,15,181	0/0:14,0:14:0.08:0,0,0	0/1:5,5:9:0.78:59,0,1	1/1:7,0:8:2.99:23,3,0	0/0:15,0:8:18.01:0,18,236	1/1:4,3:7:1.38:20,1,0	0/0:8,0:7:12.43:0,12,137	./.	0/1:8,3:11:15.12:15,0,36	1/1:5,1:6:3:28,3,0	1/1:13,0:14:16.22:188,16,0	0/1:13,1:19:52.94:61,0,53	1/1:15,0:15:1.97:58,2,0	0/0:30,0:30:89.08:0,89,1543	0/1:12,1:13:76.70:77,0,244	0/1:20,0:10:95.27:171,0,95	0/1:6,2:8:3.52:77,0,4	1/1:18,1:19:2.96:21,3,0	./.	0/0:5,3:8:2.48:0,2,11	0/1:8,2:10:0.49:1,0,0	1/1:9,1:10:5.92:71,6,0	0/1:15,2:15:84.33:84,0,114	0/1:7,4:9:6.14:76,0,6	0/1:10,0:8:22.22:113,0,22
chr10	46001514	.	C	CTGTG	2735.70	PASS	AB=1.000;AC=27;AF=0.500;AN=54;BaseQRankSum=-2.042;DP=761;FS=6.010;HRun=0;HaplotypeScore=160.3622;InbreedingCoeff=0.6900;MQ=61.00;MQ0=13;MQRankSum=-3.254;QD=7.47;ReadPosRankSum=-0.412;VQSLOD=2.4682;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:56:40.19:0,40,390	1/1:11,2:14:9.18:147,9,0	0/0:29,0:18:2.99:0,3,23	0/1:24,0:20:0:0,0,0	1/1:20,1:21:13.21:259,13,0	0/0:31,0:30:30.08:0,30,361	0/0:28,0:27:24.07:0,24,292	1/1:31,0:31:8.54:80,9,0	0/0:27,0:26:24.02:0,24,268	1/1:23,2:24:26.99:467,27,0	1/1:16,1:17:9.03:183,9,0	0/0:21,0:21:30.08:0,30,376	0/1:36,0:34:93.11:93,0,247	1/1:22,0:26:6.91:120,7,0	1/1:19,0:22:6.74:98,7,0	1/1:23,9:33:12.46:231,12,0	0/0:30,0:32:63.21:0,63,975	1/1:5,8:12:9.03:214,9,0	./.	0/0:30,0:30:14.12:0,14,188	0/0:41,0:42:4.11:0,4,91	0/1:30,0:28:32.64:33,0,112	0/0:21,0:20:24.06:0,24,293	0/0:29,0:26:18.02:0,18,218	1/1:22,6:28:17.90:301,18,0	1/1:30,1:31:30.61:469,31,0	0/0:27,0:27:5.58:0,6,34	1/1:10,1:12:15.01:240,15,0
chr10	46001549	.	T	TAG	3764.92	PASS	AB=0.968;AC=41;AF=0.732;AN=56;BaseQRankSum=2.027;DP=656;FS=2.544;HRun=0;HaplotypeScore=152.5484;InbreedingCoeff=0.2818;MQ=65.88;MQ0=24;MQRankSum=-0.845;QD=7.13;ReadPosRankSum=1.089;VQSLOD=3.2210;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,37:46:21.05:498,21,0	1/1:11,0:12:12.91:68,13,0	0/0:35,0:12:17.46:0,17,230	0/0:57,0:21:0.93:0,1,45	1/1:15,0:16:4.16:15,4,0	1/1:3,17:19:26.85:389,27,0	1/1:4,24:28:17.95:271,18,0	0/1:28,0:29:27.57:28,0,620	1/1:6,17:23:17.85:288,18,0	0/1:16,0:16:57.60:58,0,71	0/1:7,0:7:7.20:22,0,7	1/1:4,26:30:17.84:306,18,0	1/1:7,26:34:34.67:533,35,0	1/1:22,0:22:22.35:95,22,0	1/1:16,0:20:13.65:59,14,0	0/1:20,0:22:7.16:45,0,7	0/0:26,0:26:75.24:0,75,951	0/0:7,0:7:8.91:0,9,62	0/1:8,0:8:8.86:31,0,9	1/1:20,0:20:11.29:63,11,0	1/1:27,0:27:2.74:12,3,0	1/1:8,20:27:11.44:120,11,0	1/1:4,12:15:12.04:204,12,0	1/1:3,25:26:14.92:219,15,0	0/1:17,0:20:3.15:25,0,3	0/1:19,0:20:9.91:171,0,10	1/1:21,0:21:25.82:193,26,0	1/1:8,0:8:8.75:50,9,0
chr10	46001555	.	G	GAGACAGAC	8288.01	PASS	AB=0.783;AC=31;AF=0.554;AN=56;BaseQRankSum=-3.242;DP=733;FS=7.522;HRun=0;HaplotypeScore=189.6655;InbreedingCoeff=0.6516;MQ=67.60;MQ0=22;MQRankSum=-9.227;QD=17.30;ReadPosRankSum=-5.559;VQSLOD=1.7692;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:43:30.93:0,31,217	1/1:5,0:13:9.34:120,9,0	0/1:42,0:17:5.71:6,0,282	0/1:64,0:25:21.95:22,0,166	0/1:6,7:16:0:0,0,0	0/0:23,0:22:32.84:0,33,307	0/0:31,0:30:22.51:0,23,225	1/1:12,17:43:89.87:2376,90,0	0/0:23,0:23:23.87:0,24,243	1/1:6,5:19:36.03:984,36,0	0/1:3,4:9:0:0,0,0	0/0:30,0:30:23.77:0,24,187	0/0:35,0:34:18.78:0,19,177	0/1:8,10:24:0:0,0,0	1/1:10,0:30:11.78:127,12,0	1/1:13,8:27:3.56:128,4,0	0/0:26,0:26:69.11:0,69,1456	1/1:11,0:10:8.99:239,9,0	1/1:2,0:19:41.98:1119,42,0	1/1:2,0:21:11.87:236,12,0	1/1:3,0:28:4.28:11,4,0	0/1:29,0:28:2.14:2,0,154	0/0:14,0:13:11.89:0,12,85	0/0:28,0:26:17.96:0,18,174	0/1:12,7:22:0.01:0,0,0	1/1:6,15:24:56.44:1780,56,0	1/1:2,0:28:25.46:760,25,0	1/1:2,3:8:9.03:378,9,0
chr10	46002804	.	AT	A	869.84	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=5.714;DP=527;FS=0.541;HRun=11;HaplotypeScore=62.8875;InbreedingCoeff=0.8023;MQ=65.88;MQ0=0;MQRankSum=0.953;QD=11.15;ReadPosRankSum=-2.351;VQSLOD=2.5326;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,1:29:50.34:0,50,723	1/1:4,11:15:20.88:172,21,0	0/0:7,0:7:15.01:0,15,141	0/1:7,0:7:11:22,0,11	0/0:25,1:26:41.35:0,41,628	0/0:19,0:20:29.16:0,29,419	0/0:10,1:12:8.28:0,8,262	1/1:11,22:33:61.61:485,62,0	0/0:16,0:16:48.10:0,48,497	0/0:18,0:18:45.09:0,45,462	0/0:27,0:29:65.99:0,66,668	0/0:19,0:19:48.09:0,48,496	0/0:15,0:15:33.08:0,33,346	0/0:6,0:6:18.05:0,18,192	1/1:6,16:21:15.95:337,16,0	0/0:17,0:18:50.99:0,51,520	0/0:35,0:35:93.22:0,93,985	0/0:12,0:12:36.09:0,36,384	0/0:15,1:16:14.43:0,14,348	0/0:24,1:25:20.44:0,20,413	0/0:9,0:12:35.59:0,36,331	0/0:10,0:12:32.88:0,33,322	0/0:18,0:18:33.07:0,33,344	0/0:16,0:16:39.09:0,39,409	0/0:22,1:24:22.40:0,22,485	0/0:19,0:21:53.79:0,54,532	0/0:22,2:26:10.68:0,11,501	0/0:16,0:17:41.87:0,42,397
chr10	46003617	.	C	CAGTGAGTGAGTGAGTG	11622.10	PASS	AB=0.950;AC=21;AF=0.375;AN=56;BaseQRankSum=5.023;DP=725;FS=1.028;HRun=0;HaplotypeScore=303.5912;InbreedingCoeff=0.8183;MQ=70.41;MQ0=0;MQRankSum=-10.505;QD=43.20;ReadPosRankSum=-4.674;VQSLOD=2.5122;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:75.26:0,75,3026	0/0:11,0:11:9.01:0,9,204	0/0:32,0:24:2.98:0,3,21	0/0:35,0:28:5.07:0,5,62	1/1:22,4:28:18.06:1350,18,0	0/0:18,0:18:18.06:0,18,715	0/0:21,0:21:6.09:0,6,828	1/1:26,0:26:12.04:218,12,0	0/0:23,0:23:36.12:0,36,1451	1/1:26,2:31:30.04:1440,30,0	1/1:21,4:25:15.05:1125,15,0	0/0:19,0:19:39.13:0,39,1692	0/0:28,0:28:60.21:0,60,2425	1/1:35,2:37:33.11:2388,33,0	0/0:36,0:36:69.24:0,69,2958	1/1:24,0:32:33.11:1411,33,0	0/0:23,0:23:30:0,30,1556	1/1:7,0:7:1.55:4,2,0	0/0:26,0:25:30.10:0,30,1123	0/0:33,0:33:69.22:0,69,2617	0/0:26,0:26:48.15:0,48,1771	0/0:34,0:34:72.09:0,72,3123	0/0:20,0:20:18.06:0,18,751	0/1:18,0:19:26.38:26,0,685	1/1:19,0:23:24.08:946,24,0	1/1:25,0:25:15.05:791,15,0	0/0:34,0:34:57.18:0,57,2305	1/1:11,3:16:28.91:1922,29,0
chr10	46003831	.	G	GT	7003.39	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-13.312;DP=692;FS=3.104;HRun=7;HaplotypeScore=68.2032;InbreedingCoeff=0.9999;MQ=84.38;MQ0=0;MQRankSum=-1.085;QD=31.98;ReadPosRankSum=2.979;VQSLOD=4.8982;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:45.83:0,46,460	0/0:18,0:18:51.08:0,51,492	0/0:28,0:28:63.01:0,63,577	0/0:17,0:17:41.27:0,41,375	1/1:3,29:32:87.18:1010,87,0	0/0:19,0:19:57.09:0,57,550	0/0:24,0:24:66.03:0,66,620	0/0:33,0:33:75.09:0,75,715	0/0:18,0:18:35.16:0,35,436	1/1:3,24:27:72.21:856,72,0	1/1:3,26:30:78.06:901,78,0	0/0:20,0:20:60.10:0,60,579	0/0:29,0:29:84.12:0,84,806	1/1:4,22:26:63.19:761,63,0	0/0:32,0:32:84.13:0,84,811	1/1:1,16:17:36.11:435,36,0	0/0:19,0:18:48.04:0,48,453	1/1:1,14:15:39.12:471,39,0	0/0:27,0:27:72.09:0,72,687	0/0:40,0:39:99:0,109,1039	0/0:20,0:20:51.06:0,51,485	0/0:28,0:28:75.09:0,75,713	0/0:29,0:29:75.10:0,75,719	0/0:17,0:17:42.06:0,42,406	1/1:1,26:27:78.24:942,78,0	1/1:0,25:25:75.23:903,75,0	0/0:34,0:34:93.13:0,93,892	1/1:1,19:20:60.18:725,60,0
chr10	46004969	.	A	AT	4689.53	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-14.606;DP=518;FS=15.918;HRun=9;HaplotypeScore=61.2780;InbreedingCoeff=0.9835;MQ=70.95;MQ0=0;MQRankSum=0.054;QD=26.65;ReadPosRankSum=-2.176;VQSLOD=3.2174;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:2,0:17:30.56:0,31,90	0/0:14,0:14:38.99:0,39,339	0/0:5,0:5:15:0,15,130	0/0:9,0:9:11.12:0,11,118	1/1:4,25:29:72.12:771,72,0	0/0:1,0:20:38.70:0,39,114	0/0:3,0:11:14.26:0,14,42	0/0:25,0:25:59.96:0,60,518	0/0:2,0:14:24.44:0,24,72	1/1:2,23:25:66.17:722,66,0	1/1:2,19:21:54.06:570,54,0	0/0:1,0:13:22.41:0,22,66	0/0:1,0:29:55:0,55,162	1/1:1,21:22:31.10:571,31,0	0/0:20,0:20:53.97:0,54,465	1/1:2,21:23:54.15:597,54,0	0/0:19,0:19:44.97:0,45,391	1/1:0,8:8:21.06:232,21,0	0/0:21,0:20:47.96:0,48,414	0/0:31,0:31:86.97:0,87,755	0/0:6,0:6:15:0,15,130	0/0:1,0:16:30.55:0,31,90	0/0:5,0:24:23.94:0,24,83	0/0:0,0:18:34.63:0,35,102	1/1:1,11:13:29.14:359,29,0	1/1:3,21:24:60.11:635,60,0	0/0:30,0:30:74.94:0,75,647	1/1:2,9:11:21.06:232,21,0
chr10	46006191	.	CTCTTTCTTTCTTTCTTTCTTTCTTTCTT	C	6404.27	PASS	AB=0.867;AC=28;AF=0.609;AN=46;BaseQRankSum=6.607;DP=474;FS=1.618;HRun=0;HaplotypeScore=326.5552;InbreedingCoeff=0.4151;MQ=54.06;MQ0=8;MQRankSum=-0.363;QD=23.20;ReadPosRankSum=-0.461;VQSLOD=3.0674;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:18,0:18:45.67:161,0,46	0/0:5,0:4:3.01:0,3,107	./.	./.	1/1:11,10:21:18.02:621,18,0	./.	./.	0/0:44,0:42:54.45:0,54,1710	1/1:7,0:7:3.01:195,3,0	1/1:17,7:24:21.04:764,21,0	1/1:10,18:28:29.89:741,30,0	1/1:12,0:12:3.01:48,3,0	1/1:8,0:8:6.02:391,6,0	1/1:9,8:17:11.84:860,12,0	0/1:17,0:24:19.86:20,0,1242	1/1:11,0:11:3.01:52,3,0	0/0:15,0:22:27.09:0,27,1908	0/1:9,7:16:76.73:319,0,77	0/0:21,0:19:21:0,21,472	0/0:19,0:28:39.12:0,39,1348	./.	1/1:11,0:11:6.02:391,6,0	0/1:18,0:18:11.69:142,0,12	0/0:11,0:11:0.94:0,1,2	1/1:6,6:12:6.02:345,6,0	1/1:16,12:28:30.05:942,30,0	0/0:9,0:20:30.09:0,30,874	1/1:13,7:21:6.02:411,6,0
chr10	46006368	.	T	TC	1492.48	PASS	AB=0.830;AC=42;AF=0.750;AN=56;BaseQRankSum=0.240;DP=334;FS=8.771;HRun=10;HaplotypeScore=52.3681;InbreedingCoeff=0.4651;MQ=69.05;MQ0=5;MQRankSum=0.082;QD=5.92;ReadPosRankSum=-1.682;VQSLOD=0.1740;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,1:20:50.80:0,51,398	1/1:3,0:3:0.08:5,0,0	0/1:31,0:9:11.74:12,0,34	0/0:24,0:14:20.87:0,21,157	1/1:6,0:11:10.73:48,11,0	0/0:12,0:12:29.93:0,30,242	0/0:12,0:12:26.71:0,27,209	1/1:18,0:20:14.71:106,15,0	1/1:3,4:7:12.03:128,12,0	1/1:1,0:10:11.18:62,11,0	1/1:3,2:9:14.62:96,15,0	1/1:4,4:8:12.03:125,12,0	1/1:4,9:13:9.02:96,9,0	1/1:4,0:4:11.80:76,12,0	0/1:18,0:18:25.81:26,0,27	1/1:5,1:12:14.52:99,15,0	0/0:14,0:14:35.92:0,36,292	0/1:3,1:10:9.91:66,0,10	1/1:6,4:10:7.96:80,8,0	1/1:7,4:12:6.73:91,7,0	1/1:2,2:4:3.01:32,3,0	1/1:5,2:7:5.88:47,6,0	0/1:7,4:11:18.63:26,0,19	1/1:2,7:9:12.03:128,12,0	1/1:3,1:8:5.88:47,6,0	1/1:7,0:11:5.98:51,6,0	1/1:3,9:14:14.06:167,14,0	1/1:8,0:10:8.91:60,9,0
chr10	46006812	.	CT	C	1331.16	PASS	AB=0.770;AC=18;AF=0.321;AN=56;BaseQRankSum=-0.616;DP=553;FS=2.792;HRun=14;HaplotypeScore=61.8191;InbreedingCoeff=0.4653;MQ=58.17;MQ0=8;MQRankSum=1.790;QD=6.11;ReadPosRankSum=2.500;VQSLOD=2.5145;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:10,1:28:17.57:0,18,193	0/0:4,0:4:3:0,3,28	0/0:13,0:4:2.99:0,3,24	0/0:16,0:10:8.01:0,8,44	1/1:9,19:28:38.52:267,39,0	0/0:7,0:14:22.99:0,23,136	0/0:8,0:19:23.13:0,23,143	0/0:16,1:19:13.12:0,13,228	0/0:11,0:13:25.86:0,26,146	1/1:7,10:17:0.29:123,0,0	1/1:6,4:10:5.75:41,6,0	0/1:3,1:15:5.77:6,0,55	0/0:6,0:20:17.93:0,18,88	0/1:7,8:14:20:99,0,20	0/0:24,1:28:39.09:0,39,460	1/1:6,12:19:34.63:228,35,0	0/0:49,3:52:41.40:0,41,759	1/1:8,17:24:28.76:191,29,0	0/1:23,3:22:7.88:8,0,214	0/0:19,0:19:27.99:0,28,271	0/0:14,0:16:10.14:0,10,138	0/0:5,0:11:20.23:0,20,115	0/0:15,1:26:0.52:0,1,107	0/0:2,1:15:2.16:0,2,78	0/1:8,13:21:56.90:96,0,57	1/1:6,18:23:44.15:292,44,0	0/0:18,1:19:12.39:0,12,231	1/1:5,10:14:1.97:157,2,0
chr10	46008029	.	AAACT	A	4288.11	PASS	AB=0.950;AC=21;AF=0.389;AN=54;BaseQRankSum=1.975;DP=695;FS=2.051;HRun=0;HaplotypeScore=121.5372;InbreedingCoeff=0.8795;MQ=68.92;MQ0=5;MQRankSum=0.821;QD=16.43;ReadPosRankSum=-0.995;VQSLOD=4.1564;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:87.30:0,87,1957	1/1:3,7:10:21.07:326,21,0	./.	0/0:27,0:24:3.01:0,3,56	1/1:18,19:37:51.17:751,51,0	0/0:22,0:22:36.12:0,36,802	0/0:15,0:15:21.07:0,21,461	1/1:26,5:31:15.04:198,15,0	0/0:23,0:23:30.10:0,30,690	1/1:12,10:22:30.10:461,30,0	1/1:11,12:22:30.06:406,30,0	0/0:22,0:22:36.12:0,36,814	0/0:28,0:28:42.14:0,42,955	0/0:23,0:23:51.18:0,51,1166	1/1:14,16:30:36.12:558,36,0	1/1:6,10:16:12.04:186,12,0	0/0:18,0:18:39.13:0,39,878	1/1:6,3:9:9.50:141,10,0	0/0:20,0:19:33.11:0,33,740	0/0:46,0:46:72.03:0,72,1570	0/0:27,0:27:30.10:0,30,695	0/1:18,1:19:22.43:22,0,461	0/0:24,0:24:42.14:0,42,947	0/0:22,0:22:30.06:0,30,610	1/1:14,12:26:21.07:326,21,0	1/1:18,20:38:62.18:914,62,0	0/0:25,0:25:30.10:0,30,699	0/0:23,0:23:27.09:0,27,635
chr10	46014908	.	TGGA	T	192.58	PASS	AB=0.906;AC=8;AF=0.143;AN=56;BaseQRankSum=1.568;DP=566;FS=6.367;HRun=0;HaplotypeScore=122.6294;InbreedingCoeff=-0.1741;MQ=79.18;MQ0=1;MQRankSum=-5.828;QD=1.17;ReadPosRankSum=-7.388;VQSLOD=-0.4206;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:19,1:19:1.67:0,2,482	0/1:13,0:13:15.85:16,0,374	0/0:33,0:24:57.65:0,58,794	0/1:30,2:29:15.65:16,0,981	0/0:27,0:27:34.36:0,34,1128	0/0:24,0:24:46.27:0,46,811	0/1:14,1:15:47.52:48,0,293	0/1:26,1:27:8.68:9,0,1010	0/0:9,0:9:18.04:0,18,225	0/0:21,0:22:56.63:0,57,894	0/0:13,0:13:39.13:0,39,579	0/1:9,7:16:87.59:88,0,414	0/1:19,2:21:82.92:83,0,345	0/0:19,0:19:45.14:0,45,668	0/0:22,1:23:20.04:0,20,682	0/1:29,1:30:18.27:18,0,947	0/0:26,0:26:78.25:0,78,1517	0/0:11,0:11:24.01:0,24,376	0/0:22,0:22:65.17:0,65,970	0/0:20,0:20:59.65:0,60,833	0/0:8,0:8:24.05:0,24,348	0/1:6,1:7:48.88:49,0,130	0/0:20,0:20:30.77:0,31,723	0/0:7,0:7:18.06:0,18,299	0/0:28,0:28:61.64:0,62,915	0/0:32,0:32:14.81:0,15,1042	0/0:29,0:29:87.28:0,87,1311	0/0:9,0:9:26.94:0,27,333
chr10	46014911	.	A	ACTTT	3932.50	PASS	AB=0.599;AC=22;AF=0.393;AN=56;BaseQRankSum=8.127;DP=611;FS=4.679;HRun=0;HaplotypeScore=135.6823;InbreedingCoeff=-0.4481;MQ=78.59;MQ0=1;MQRankSum=-5.476;QD=9.04;ReadPosRankSum=2.039;VQSLOD=2.8734;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:9,0:24:62.56:194,0,63	0/1:3,0:13:16.33:171,0,16	0/0:34,0:25:11.89:0,12,396	0/0:36,0:30:25.15:0,25,781	0/1:9,0:30:98.83:204,0,99	0/1:8,0:29:88.27:364,0,88	0/1:4,1:16:20.62:292,0,21	0/1:9,0:32:99:317,0,102	0/1:3,0:12:35.44:89,0,35	0/1:9,0:24:93.99:94,0,148	0/1:5,0:17:15.37:209,0,15	0/1:14,0:15:20.88:164,0,21	0/1:5,0:24:37.73:240,0,38	0/1:5,0:20:99:115,0,109	0/1:6,0:25:11.60:256,0,12	0/1:9,0:27:99:221,0,109	0/0:21,0:24:72.14:0,72,1235	0/1:4,0:11:49.99:50,0,79	0/0:6,0:24:26.72:0,27,630	0/0:4,0:20:56.54:0,57,451	0/0:0,0:4:10.80:0,11,79	1/1:1,0:11:19.73:219,20,0	0/1:8,0:23:99:110,0,147	0/1:3,0:8:53.52:93,0,54	0/1:5,0:28:61.55:121,0,62	0/1:6,0:33:41.02:309,0,41	0/0:4,0:31:76.25:0,76,623	0/1:2,0:11:0.61:102,0,1
chr10	46015984	.	A	AT	577.62	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-6.587;DP=627;FS=8.857;HRun=8;HaplotypeScore=62.0387;InbreedingCoeff=0.9638;MQ=78.47;MQ0=0;MQRankSum=0.316;QD=20.63;ReadPosRankSum=-3.302;VQSLOD=2.0282;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:81.01:0,81,735	0/0:5,0:5:12.01:0,12,110	0/0:17,0:17:32.87:0,33,287	0/0:13,0:12:20.20:0,20,161	0/0:31,0:31:84.02:0,84,764	0/0:28,0:28:66.03:0,66,604	0/0:19,0:19:57.03:0,57,522	1/1:5,23:28:62.74:672,63,0	0/0:12,0:12:33.02:0,33,302	0/0:25,0:25:66.02:0,66,600	0/0:19,0:19:45.02:0,45,412	0/0:30,0:30:84.04:0,84,768	0/0:31,0:31:78:0,78,706	0/0:22,0:22:44.04:0,44,501	0/0:29,0:29:78.03:0,78,714	0/0:15,0:15:45.02:0,45,412	0/0:26,0:26:75.03:0,75,686	0/0:15,0:15:39:0,39,357	0/0:21,0:21:51:0,51,461	0/0:28,0:28:78.02:0,78,709	0/0:16,0:16:39.01:0,39,357	0/0:18,0:18:54.02:0,54,490	0/0:28,0:28:78.02:0,78,708	0/0:28,0:29:77.07:0,77,692	0/0:16,0:16:42:0,42,380	0/0:30,0:30:78.03:0,78,714	0/0:31,0:31:84.03:0,84,769	0/0:9,0:9:27.01:0,27,245
chr10	46019517	.	A	AGTACAT	20238.34	PASS	AB=0.950;AC=21;AF=0.375;AN=56;BaseQRankSum=-9.157;DP=768;FS=0.304;HRun=0;HaplotypeScore=152.1724;InbreedingCoeff=0.9229;MQ=80.25;MQ0=0;MQRankSum=-18.961;QD=61.70;ReadPosRankSum=1.250;VQSLOD=4.7292;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,25:39:63.22:2247,63,0	0/0:9,0:9:27.09:0,27,640	0/0:30,0:30:81.24:0,81,1737	0/0:22,0:21:54.09:0,54,1156	0/0:28,0:28:81.28:0,81,1986	1/1:1,23:29:63.22:2298,63,0	1/1:4,20:32:51.17:1858,51,0	1/1:16,0:37:99:2686,108,0	1/1:3,18:25:51.17:1822,51,0	0/0:32,0:32:96.30:0,96,2182	0/0:35,0:35:99:0,105,2374	1/1:5,19:25:66.23:2407,66,0	1/1:4,31:40:95.93:3462,96,0	0/0:27,0:27:81.24:0,81,1845	0/0:30,0:30:84.29:0,84,2059	0/1:36,2:37:99:104,0,2381	0/0:23,0:22:65.20:0,65,1379	0/0:27,0:27:80.99:0,81,1769	0/0:29,0:29:86.07:0,86,1830	0/0:28,0:28:81.26:0,81,1938	0/0:31,0:31:90.31:0,90,2203	1/1:3,18:23:42.14:1509,42,0	1/1:2,14:19:30.10:1078,30,0	1/1:0,13:21:21.07:766,21,0	0/0:22,0:22:66.23:0,66,1623	0/0:26,0:26:75.26:0,75,1826	0/0:31,0:31:90.23:0,90,2012	0/0:10,0:10:30.10:0,30,711
chr10	46019730	.	AAGG	A	7698.32	PASS	AB=0.733;AC=29;AF=0.518;AN=56;BaseQRankSum=5.852;DP=657;FS=3.740;HRun=0;HaplotypeScore=158.9085;InbreedingCoeff=0.3727;MQ=55.81;MQ0=7;MQRankSum=-0.050;QD=17.03;ReadPosRankSum=6.659;VQSLOD=4.5064;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:31,0:42:9.10:266,0,9	0/0:12,0:12:30.10:0,30,581	0/0:32,0:11:15.05:0,15,280	0/0:23,0:16:20.83:0,21,313	1/1:8,14:22:48.12:655,48,0	0/1:16,0:21:99:104,0,129	0/1:7,0:17:13.36:118,0,13	1/1:9,16:24:45.14:603,45,0	0/1:18,0:26:94.85:95,0,163	1/1:8,20:28:60.20:841,60,0	1/1:10,18:28:51.17:720,51,0	0/1:20,0:29:99:183,0,121	0/1:17,0:22:55.22:55,0,142	1/1:4,22:26:51.17:719,51,0	0/0:26,0:26:60.21:0,60,1195	1/1:5,23:28:69.23:973,69,0	0/0:20,0:20:51.13:0,51,962	1/1:9,16:25:30.87:500,31,0	0/0:16,0:13:15.05:0,15,278	0/0:28,0:28:54.18:0,54,1061	0/0:17,0:17:48.15:0,48,906	0/1:10,0:17:48.18:131,0,48	0/1:8,0:17:72.91:73,0,105	0/1:11,0:23:6.84:73,0,7	1/1:8,17:25:39.13:550,39,0	1/1:4,18:22:57.18:784,57,0	0/0:31,0:31:78.27:0,78,1500	1/1:2,6:8:18.06:254,18,0
chr10	46019745	.	G	GAATAGA	6902.64	PASS	AB=0.941;AC=11;AF=0.196;AN=56;BaseQRankSum=12.052;DP=648;FS=2.263;HRun=0;HaplotypeScore=212.6040;InbreedingCoeff=-0.0377;MQ=55.80;MQ0=7;MQRankSum=-12.743;QD=28.41;ReadPosRankSum=-0.757;VQSLOD=4.6592;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:42,1:43:99:579,0,210	0/0:13,0:13:36.12:0,36,879	0/0:30,0:16:25.77:0,26,682	0/0:22,0:16:35.79:0,36,634	0/0:19,0:19:54.18:0,54,884	0/1:20,1:20:23.01:784,0,23	0/1:17,0:17:99:266,0,135	0/1:29,0:28:99:297,0,720	0/1:30,1:31:67.23:1556,0,67	0/0:26,0:26:78.27:0,78,1363	0/0:25,0:25:69.22:0,69,1148	0/1:24,2:27:99:1120,0,196	0/1:17,0:18:40.21:885,0,40	0/0:26,0:26:63.22:0,63,1068	0/0:25,0:25:75.24:0,75,1787	0/0:30,0:30:84.27:0,84,1362	0/0:24,0:24:72.11:0,72,1626	0/0:19,0:19:39.16:0,39,644	0/0:12,0:9:24.08:0,24,557	0/0:23,0:23:69.22:0,69,1597	0/0:24,0:24:72.24:0,72,1676	0/1:12,4:17:78.82:375,0,79	0/1:17,1:18:99:660,0,110	1/1:22,0:22:9.13:381,9,0	0/0:21,0:21:51.17:0,51,853	0/0:23,0:23:68.89:0,69,1058	0/0:30,0:30:90.26:0,90,2057	0/0:13,0:13:35.45:0,35,555
chr10	46019748	.	G	GAATAGA	7543.52	PASS	AB=0.944;AC=17;AF=0.304;AN=56;BaseQRankSum=12.958;DP=648;FS=9.169;HRun=0;HaplotypeScore=212.9849;InbreedingCoeff=0.7050;MQ=54.80;MQ0=7;MQRankSum=-14.404;QD=30.92;ReadPosRankSum=0.843;VQSLOD=3.3371;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:42,2:44:17.46:817,17,0	0/0:13,0:13:39.13:0,39,906	0/0:27,0:15:31.18:0,31,723	0/0:23,0:18:44.29:0,44,760	0/0:19,0:19:51.03:0,51,723	1/1:15,4:18:23.58:822,24,0	0/1:17,1:18:13.97:297,0,14	0/1:31,0:30:65.23:65,0,577	1/1:22,8:30:60.78:1533,61,0	0/0:26,0:26:78.10:0,78,1200	0/0:23,0:23:63.14:0,63,1000	1/1:21,4:25:11.11:1064,11,0	1/1:12,6:18:0.68:918,1,0	0/0:27,0:27:60.10:0,60,933	0/0:25,0:25:75.26:0,75,1792	0/0:31,0:32:87.12:0,87,1333	0/0:24,0:24:69.19:0,69,1583	0/0:19,0:19:34.73:0,35,643	0/0:13,0:10:29.85:0,30,493	0/0:23,0:23:69.21:0,69,1571	0/0:24,0:24:72.25:0,72,1747	1/1:14,3:17:34.30:673,34,0	1/1:14,5:19:39.31:866,39,0	0/1:20,3:23:10.69:488,0,11	0/0:20,0:20:41.97:0,42,611	0/0:22,0:22:65.74:0,66,963	0/0:30,0:30:90.31:0,90,2151	0/0:12,0:12:32.32:0,32,576
chr10	46019751	.	G	GAGA	3925.45	PASS	AB=0.875;AC=12;AF=0.214;AN=56;BaseQRankSum=13.675;DP=656;FS=3.686;HRun=0;HaplotypeScore=192.3068;InbreedingCoeff=0.2238;MQ=55.10;MQ0=6;MQRankSum=-13.614;QD=15.89;ReadPosRankSum=-0.206;VQSLOD=3.4856;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:40,2:42:53.30:320,0,53	0/0:13,0:13:39.09:0,39,562	0/0:28,0:16:29.93:0,30,453	0/0:24,0:20:33.95:0,34,497	0/0:17,0:17:48:0,48,430	0/1:15,4:18:1.40:448,0,1	0/1:15,1:16:61.32:126,0,61	0/1:35,0:35:99:142,0,321	0/1:22,8:30:11.55:819,0,12	0/0:25,0:25:63.49:0,63,548	0/0:24,0:24:62.76:0,63,552	0/1:21,4:25:39.03:618,0,39	0/1:13,6:19:1.67:505,0,2	0/0:26,0:26:59.98:0,60,533	0/0:28,0:28:78.20:0,78,1159	0/0:32,0:32:93:0,93,828	0/0:23,0:23:68.99:0,69,945	0/0:20,0:20:5.31:0,5,334	0/0:13,0:10:29.97:0,30,374	0/0:22,0:22:66.09:0,66,986	0/0:26,0:26:78.05:0,78,1057	0/1:16,3:19:42.12:239,0,42	1/1:14,5:19:3.24:380,3,0	1/1:20,3:23:28.45:328,28,0	0/0:18,0:18:41.97:0,42,370	0/0:23,0:23:64.33:0,64,526	0/0:34,0:34:99:0,99,1448	0/0:12,0:12:31.81:0,32,268
chr10	46022223	.	T	TGCGC	1326.12	PASS	AB=0.882;AC=17;AF=0.304;AN=56;BaseQRankSum=8.882;DP=612;FS=6.424;HRun=0;HaplotypeScore=124.0330;InbreedingCoeff=-0.0228;MQ=74.06;MQ0=6;MQRankSum=-0.290;QD=5.08;ReadPosRankSum=-5.322;VQSLOD=-0.0948;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:11.54:0,12,753	0/0:10,0:10:27.07:0,27,374	0/0:31,0:25:61.03:0,61,887	0/0:29,0:21:30.06:0,30,450	1/1:8,8:16:1.51:65,2,0	0/0:27,0:27:63.09:0,63,855	0/0:22,0:22:30.39:0,30,635	0/0:21,0:20:54.11:0,54,794	0/0:19,0:19:20.41:0,20,454	0/1:23,2:25:10.20:246,0,10	1/1:8,0:8:11.88:85,12,0	0/0:26,0:26:22.28:0,22,564	0/1:27,0:27:99:113,0,437	0/1:19,1:20:14.68:131,0,15	0/0:24,0:24:59.74:0,60,678	0/1:3,9:13:24:64,0,24	0/0:27,0:27:72.23:0,72,1133	0/1:10,13:23:57.23:242,0,57	0/0:11,0:11:8.77:0,9,316	0/1:12,0:12:4.08:4,0,208	0/0:45,0:44:68.94:0,69,964	0/1:21,0:21:38.23:38,0,411	0/1:16,0:16:31.28:31,0,292	0/1:23,0:23:76.90:77,0,466	0/1:16,0:16:25.65:84,0,26	0/1:10,15:25:86.03:224,0,86	0/0:20,0:20:1.95:0,2,507	1/1:5,9:15:3.49:85,3,0
chr10	46022233	.	C	CGTGT	3714.54	PASS	AB=0.892;AC=41;AF=0.759;AN=54;BaseQRankSum=0.962;DP=652;FS=1.600;HRun=0;HaplotypeScore=125.0238;InbreedingCoeff=-0.0816;MQ=57.16;MQ0=9;MQRankSum=-1.176;QD=6.18;ReadPosRankSum=-0.346;VQSLOD=2.6411;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:39,1:41:13.21:357,13,0	0/1:11,0:11:4.51:5,0,179	0/1:23,0:16:0:0,0,0	./.	1/1:16,0:17:8.08:118,8,0	0/1:24,0:27:56.55:57,0,86	0/1:18,1:28:61.49:71,0,61	1/1:20,0:18:3.45:23,3,0	1/1:10,7:21:5.75:83,6,0	1/1:25,0:25:22.52:249,23,0	1/1:11,0:11:20.97:172,21,0	0/1:15,10:27:40.55:65,0,41	1/1:12,14:27:20.32:376,20,0	1/1:17,0:22:11.64:121,12,0	0/1:13,0:25:66.45:66,0,76	0/1:14,0:14:40.47:64,0,40	0/0:30,0:30:33.71:0,34,529	0/1:21,0:22:63.18:285,0,63	1/1:20,0:19:17.75:140,18,0	1/1:7,1:14:7.92:42,8,0	1/1:35,4:56:3.22:13,3,0	1/1:13,9:23:14.62:237,15,0	0/1:14,3:17:31.41:174,0,31	1/1:14,11:27:20.81:436,21,0	0/1:17,0:18:21.51:53,0,22	0/1:28,0:27:34.57:306,0,35	1/1:13,1:21:8.96:121,9,0	1/1:12,0:12:5.75:83,6,0
chr10	46023801	.	AT	A	6354.25	PASS	AB=0.685;AC=47;AF=0.839;AN=56;BaseQRankSum=2.729;DP=639;FS=7.344;HRun=14;HaplotypeScore=76.4370;InbreedingCoeff=0.2739;MQ=73.75;MQ0=0;MQRankSum=-1.238;QD=10.52;ReadPosRankSum=5.654;VQSLOD=4.2193;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,12:15:32.69:226,33,0	1/1:3,7:10:17.84:123,18,0	0/1:18,1:16:7.18:7,0,63	0/0:12,0:11:4.53:0,5,63	0/1:5,17:23:7.34:209,0,7	1/1:4,20:24:50.58:349,51,0	1/1:3,10:14:0.94:142,1,0	1/1:9,0:38:55.42:162,55,0	1/1:8,14:22:10.06:218,10,0	1/1:6,14:21:43.61:292,44,0	1/1:4,22:26:47.42:329,47,0	0/1:13,11:25:34.23:153,0,34	1/1:10,19:32:49.87:324,50,0	1/1:7,16:23:34.50:351,35,0	1/1:8,14:23:9.15:203,9,0	1/1:3,12:17:30.85:197,31,0	0/0:22,1:23:24.41:0,24,351	0/1:9,12:23:8.31:178,0,8	0/1:9,11:24:11.93:185,0,12	1/1:6,20:29:62.59:408,63,0	1/1:7,22:32:38.70:395,39,0	1/1:4,18:22:18.55:265,19,0	1/1:3,15:20:41.58:277,42,0	1/1:4,16:20:41.59:288,42,0	1/1:9,20:29:3.74:314,4,0	1/1:6,14:21:23.52:271,24,0	1/1:14,20:37:19.79:257,20,0	1/1:3,11:15:34.72:232,35,0
chr10	46024833	.	CTTTG	C	16077.36	PASS	AB=0.710;AC=49;AF=0.875;AN=56;BaseQRankSum=5.306;DP=712;FS=1.676;HRun=0;HaplotypeScore=124.2372;InbreedingCoeff=0.8239;MQ=72.81;MQ0=3;MQRankSum=-0.561;QD=25.81;ReadPosRankSum=3.523;VQSLOD=4.7375;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,33:47:21.07:1057,21,0	1/1:2,6:8:18.02:266,18,0	0/0:27,0:24:35.88:0,36,682	0/0:24,0:25:27.03:0,27,419	1/1:9,15:24:42.14:684,42,0	1/1:3,19:22:54.18:884,54,0	1/1:10,18:28:33.11:540,33,0	0/1:26,0:44:30.46:186,0,30	1/1:6,18:24:45.01:728,45,0	1/1:8,13:21:39.11:585,39,0	1/1:4,13:17:36.05:558,36,0	1/1:9,17:26:42.14:676,42,0	1/1:8,15:23:36.12:589,36,0	1/1:6,21:27:39.13:638,39,0	1/1:6,21:27:45.15:737,45,0	1/1:5,15:20:27.09:442,27,0	0/0:36,0:36:99:0,105,2517	1/1:9,27:37:66.22:1059,66,0	1/1:3,19:22:53.91:638,54,0	1/1:12,19:31:57.13:900,57,0	1/1:3,13:16:27.09:442,27,0	1/1:8,20:28:44.91:641,45,0	1/1:6,16:21:35.81:557,36,0	1/1:5,15:20:33.11:540,33,0	1/1:9,21:30:51.17:834,51,0	1/1:5,14:19:42.04:583,42,0	1/1:9,23:32:72.11:1116,72,0	1/1:3,5:8:12.04:196,12,0
chr10	46026520	.	C	CCCTT	5790.96	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-9.165;DP=591;FS=0.927;HRun=0;HaplotypeScore=94.0461;InbreedingCoeff=0.9916;MQ=79.11;MQ0=0;MQRankSum=-1.735;QD=52.65;ReadPosRankSum=1.337;VQSLOD=6.0267;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,138,2451	1/1:1,5:6:12.04:275,12,0	0/0:17,0:17:33.10:0,33,595	0/0:17,0:17:32.53:0,33,499	0/0:28,0:28:66.05:0,66,1213	0/0:16,0:16:45.14:0,45,779	0/0:17,0:17:48.16:0,48,871	0/0:28,0:28:63.19:0,63,1038	0/0:14,0:14:39.12:0,39,674	0/0:19,0:19:57.18:0,57,981	0/0:14,0:14:30.09:0,30,521	0/0:16,0:16:42.14:0,42,772	0/0:23,0:23:66.23:0,66,1206	0/0:19,0:19:57.19:0,57,1020	1/1:2,23:28:57.20:1499,57,0	0/0:30,0:30:87.28:0,87,1558	0/0:35,0:35:96.33:0,96,1752	0/0:17,0:17:51.12:0,51,819	1/1:2,8:11:27.08:653,27,0	1/1:2,20:23:53.83:1136,54,0	1/1:3,20:25:54.18:1359,54,0	0/0:18,0:18:54.14:0,54,901	0/0:9,0:9:18.06:0,18,330	0/0:29,0:29:78.26:0,78,1392	0/0:18,0:18:42.12:0,42,702	0/0:20,0:20:60.18:0,60,982	1/1:2,13:16:33.11:870,33,0	0/0:27,0:27:77.95:0,78,1277
chr10	46026948	.	C	CT	2236.64	PASS	AB=0.730;AC=16;AF=0.286;AN=56;BaseQRankSum=-5.494;DP=555;FS=3.806;HRun=12;HaplotypeScore=67.4060;InbreedingCoeff=0.3807;MQ=69.96;MQ0=2;MQRankSum=-0.121;QD=10.65;ReadPosRankSum=0.189;VQSLOD=3.1490;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:8,15:23:23.35:235,0,23	0/0:10,0:11:25.88:0,26,179	0/1:17,0:12:34.80:35,0,45	0/0:16,0:14:5.84:0,6,49	0/0:31,0:31:43.31:0,43,435	0/1:7,16:24:26.58:238,0,27	1/1:2,14:16:11.14:268,11,0	0/0:19,0:19:44.61:0,45,319	0/1:8,12:20:19.59:252,0,20	0/0:17,1:18:2.57:0,3,163	0/0:19,0:19:47.62:0,48,343	1/1:4,12:16:2.13:182,2,0	0/1:10,11:22:20.71:291,0,21	0/0:28,0:28:50.88:0,51,489	0/0:28,0:29:66.80:0,67,465	0/0:21,0:21:62.62:0,63,456	0/0:16,0:16:38.74:0,39,284	0/0:13,0:13:26.71:0,27,191	0/1:20,2:22:13.65:14,0,239	0/0:25,1:26:8.10:0,8,340	0/0:8,0:9:16.92:0,17,114	1/1:6,14:21:32.12:325,32,0	1/1:4,16:21:45.04:429,45,0	1/1:0,8:8:15.02:146,15,0	0/0:22,0:23:42.95:0,43,306	0/0:26,0:26:62.06:0,62,444	0/0:23,0:23:53.63:0,54,393	0/0:14,0:16:31.85:0,32,225
chr10	46027872	.	TTC	T	1065.20	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=8.451;DP=794;FS=2.542;HRun=0;HaplotypeScore=91.1864;InbreedingCoeff=0.9994;MQ=91.39;MQ0=0;MQRankSum=-3.522;QD=33.29;ReadPosRankSum=-2.693;VQSLOD=4.7872;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,114,2188	0/0:11,0:11:33.09:0,33,602	0/0:36,0:36:99:0,105,1913	0/0:30,0:30:78.70:0,79,1401	0/0:29,0:29:84.29:0,84,1613	0/0:32,0:31:93.32:0,93,1794	0/0:20,0:20:60.21:0,60,1147	1/1:5,27:32:81.27:1160,81,0	0/0:23,0:23:69.24:0,69,1320	0/0:30,0:30:87.30:0,87,1681	0/0:14,0:14:42.13:0,42,778	0/0:37,0:37:99:0,111,2067	0/0:36,0:36:99:0,108,1996	0/0:35,0:35:99:0,102,1853	0/0:48,0:48:99:0,138,2587	0/0:30,0:30:90.28:0,90,1652	0/0:29,0:29:84.27:0,84,1539	0/0:17,0:17:45.13:0,45,834	0/0:26,0:26:72.24:0,72,1363	0/0:25,0:25:75.23:0,75,1381	0/0:34,0:34:99:0,99,1840	0/0:19,0:19:57.20:0,57,1100	0/0:23,0:23:66.21:0,66,1242	0/0:31,0:31:90.28:0,90,1661	0/0:25,0:25:75.26:0,75,1449	0/0:33,0:33:99:0,99,1912	0/0:40,0:40:99:0,120,2288	0/0:11,0:11:33.10:0,33,579
chr10	46029891	.	G	GGCAC	515.51	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-3.984;DP=735;FS=5.614;HRun=0;HaplotypeScore=119.1396;InbreedingCoeff=0.9940;MQ=75.38;MQ0=0;MQRankSum=-0.767;QD=22.41;ReadPosRankSum=-2.596;VQSLOD=2.6510;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:76.34:0,76,1576	0/0:10,0:10:21.06:0,21,326	0/0:25,0:25:27.09:0,27,394	0/0:25,0:25:32.90:0,33,442	0/0:21,0:21:48.13:0,48,751	0/0:18,0:18:42.13:0,42,678	0/0:32,0:32:54.15:0,54,829	1/1:12,10:23:36.02:610,36,0	0/0:30,0:30:87.26:0,87,1376	0/0:32,0:32:66.23:0,66,1098	0/0:18,0:18:42.13:0,42,679	0/0:28,0:28:60.21:0,60,1003	0/0:21,0:21:48.07:0,48,722	0/0:33,0:33:75.23:0,75,1204	0/0:27,0:27:54.17:0,54,879	0/0:28,0:28:66.20:0,66,1050	0/0:32,0:32:75.24:0,75,1228	0/0:24,0:24:63.12:0,63,914	0/0:23,0:23:45.10:0,45,646	0/0:26,0:26:51.16:0,51,804	0/0:56,0:56:99:0,141,2258	0/0:18,0:18:39.12:0,39,629	0/0:18,0:18:51.15:0,51,802	0/0:29,0:29:63.18:0,63,1021	0/0:32,0:32:84.29:0,84,1399	0/0:29,0:29:66.20:0,66,1031	0/0:15,0:15:33.11:0,33,543	0/0:14,0:14:36.12:0,36,602
chr10	46030332	.	CT	C	1985.65	PASS	AB=0.757;AC=31;AF=0.554;AN=56;BaseQRankSum=6.799;DP=579;FS=0.444;HRun=16;HaplotypeScore=69.7034;InbreedingCoeff=0.0141;MQ=79.61;MQ0=3;MQRankSum=-0.602;QD=4.42;ReadPosRankSum=3.520;VQSLOD=1.1029;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,3:31:10.46:0,10,313	0/1:6,1:8:15.81:16,0,17	0/0:32,0:24:6:0,6,76	0/1:22,0:14:7.52:8,0,14	1/1:15,15:31:20.88:232,21,0	0/1:17,2:23:35.14:35,0,213	0/1:6,4:13:20.77:47,0,21	0/1:28,6:41:23.52:177,0,24	0/0:13,0:13:23.92:0,24,192	1/1:6,14:22:20.57:201,21,0	0/1:8,9:17:22.59:84,0,23	0/1:14,3:18:12.49:12,0,195	0/0:16,2:20:4.94:0,5,159	0/1:9,12:22:25.34:73,0,25	1/1:13,8:22:4.77:126,5,0	1/1:12,15:27:5.39:151,5,0	0/1:20,3:23:6.06:6,0,172	1/1:7,8:19:12.38:160,12,0	1/1:7,8:18:26.50:143,26,0	1/1:7,7:15:13.41:77,13,0	1/1:6,7:18:27.74:137,28,0	0/1:9,5:15:24.05:24,0,135	0/0:11,1:13:6.26:0,6,144	0/0:19,1:20:17.93:0,18,255	0/1:8,9:17:7.62:72,0,8	0/1:8,7:19:13.89:110,0,14	1/1:6,14:20:33.47:200,33,0	0/1:10,7:19:42.49:74,0,42
chr10	46032018	.	A	AT	2335.89	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=0.953;DP=568;FS=15.396;HRun=4;HaplotypeScore=76.8702;InbreedingCoeff=0.9248;MQ=72.21;MQ0=8;MQRankSum=0.871;QD=12.10;ReadPosRankSum=-0.517;VQSLOD=0.9810;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:65.84:0,66,547	0/0:12,0:12:29.93:0,30,254	0/0:44,0:14:19.64:0,20,145	0/1:35,0:13:6.07:6,0,72	1/1:23,0:22:57.66:430,58,0	0/0:14,0:14:15:0,15,131	0/0:13,0:13:29.84:0,30,233	0/0:28,0:28:59.80:0,60,489	0/0:15,0:15:38.95:0,39,329	1/1:16,0:16:27.04:255,27,0	1/1:12,1:13:34.70:285,35,0	0/0:25,0:24:58.95:0,59,488	0/0:18,0:18:43.69:0,44,342	1/1:17,1:18:34.12:282,34,0	0/0:21,0:21:59.84:0,60,498	1/1:20,0:20:53.96:479,54,0	0/0:24,0:24:51.09:0,51,401	1/1:14,0:13:26.21:191,26,0	0/0:28,0:27:64.13:0,64,540	0/0:21,0:21:53.92:0,54,441	0/0:11,0:11:18:0,18,157	0/0:8,0:8:14.63:0,15,97	0/0:18,0:18:47.76:0,48,376	0/0:23,0:23:44.48:0,44,373	1/1:8,13:21:14.13:109,14,0	1/1:13,0:13:23.99:215,24,0	0/0:25,0:25:41.51:0,42,328	1/1:20,0:20:42.01:298,42,0
chr10	46032493	.	A	ATGT	10097.46	PASS	AB=0.682;AC=19;AF=0.339;AN=56;BaseQRankSum=-15.400;DP=867;FS=25.577;HRun=0;HaplotypeScore=114.4334;InbreedingCoeff=0.8980;MQ=71.60;MQ0=2;MQRankSum=-3.894;QD=32.68;ReadPosRankSum=-0.214;VQSLOD=2.9020;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,126,1704	0/0:7,0:7:6.02:0,6,83	0/0:29,0:27:39:0,39,477	0/0:32,0:27:33.11:0,33,445	1/1:8,33:41:93.23:1761,93,0	0/0:25,0:25:66.21:0,66,896	0/0:31,0:31:21.28:0,21,694	1/1:13,6:22:27.08:468,27,0	0/0:26,0:26:60.20:0,60,828	1/1:14,26:41:84.23:1573,84,0	1/1:3,13:17:33.07:615,33,0	0/0:38,0:38:75.23:0,75,1020	0/0:34,0:34:84.28:0,84,1160	1/1:15,28:43:57.20:1127,57,0	0/0:29,0:29:60.16:0,60,809	1/1:8,26:34:72.25:1428,72,0	0/0:38,0:38:93.31:0,93,1276	1/1:12,27:39:24.75:1208,25,0	0/0:21,0:20:21.83:0,22,328	0/0:28,0:28:54.18:0,54,745	0/0:51,0:51:93.30:0,93,1268	0/0:26,0:26:54.16:0,54,729	0/0:23,0:23:45.15:0,45,621	0/0:44,0:44:75.37:0,75,1297	1/1:10,16:26:6.68:849,7,0	1/1:14,16:30:48.15:902,48,0	0/0:21,0:21:51.17:0,51,705	0/1:7,7:15:8.96:166,0,9
chr10	46033826	.	ACAT	A	9784.67	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=16.485;DP=842;FS=17.696;HRun=0;HaplotypeScore=125.5588;InbreedingCoeff=1.0000;MQ=82.27;MQ0=1;MQRankSum=-6.470;QD=35.97;ReadPosRankSum=5.156;VQSLOD=4.4556;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,30:34:75.26:1205,75,0	0/0:16,0:16:45.15:0,45,992	0/0:21,0:21:60.18:0,60,1188	0/0:30,0:29:46.51:0,47,1217	0/0:35,0:35:93.31:0,93,2003	1/1:3,33:36:78.27:1254,78,0	1/1:0,24:24:57.19:916,57,0	0/0:39,0:39:99:0,108,2316	1/1:0,30:30:75.26:1205,75,0	0/0:41,0:41:99:0,117,2483	0/0:26,0:26:72.25:0,72,1588	1/1:3,20:23:63.21:1012,63,0	1/1:5,35:40:84.29:1350,84,0	0/0:47,0:47:99:0,138,3029	0/0:47,0:47:99:0,138,3026	0/0:34,1:35:51.18:0,51,2029	0/0:21,0:21:60.21:0,60,1318	0/0:17,0:17:51.18:0,51,1125	0/0:19,0:19:51.16:0,51,1066	0/0:26,0:26:78.27:0,78,1719	0/0:37,0:37:99:0,108,2284	1/1:3,31:34:72.25:1156,72,0	1/1:2,23:25:53.70:867,54,0	1/1:2,24:26:51.17:820,51,0	0/0:28,0:28:75.26:0,75,1655	0/0:31,0:31:93.31:0,93,2010	0/0:36,0:36:96.33:0,96,2080	0/0:18,0:18:54.19:0,54,1192
chr10	46037610	.	T	TA	4116.32	PASS	AB=0.804;AC=20;AF=0.357;AN=56;BaseQRankSum=7.099;DP=697;FS=7.053;HRun=0;HaplotypeScore=99.7422;InbreedingCoeff=0.6515;MQ=71.01;MQ0=7;MQRankSum=0.891;QD=15.36;ReadPosRankSum=2.439;VQSLOD=5.4535;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,26:29:71.91:751,72,0	0/0:7,0:7:14.84:0,15,119	0/0:63,0:22:10.21:0,10,174	0/0:53,0:18:14.09:0,14,125	0/0:36,0:36:99:0,108,1474	1/1:6,25:31:34.84:606,35,0	1/1:4,19:24:11.63:363,12,0	0/1:12,16:28:5.59:365,0,6	1/1:4,12:17:10.26:335,10,0	0/0:25,0:25:74.61:0,75,954	0/0:27,0:27:69.23:0,69,953	1/1:0,19:19:45.08:446,45,0	1/1:5,20:26:26.78:421,27,0	0/0:18,0:18:54.12:0,54,677	0/0:19,0:19:44.56:0,45,357	0/0:25,0:25:75.24:0,75,1017	0/0:25,0:25:72.18:0,72,963	0/0:18,0:18:54.15:0,54,710	0/1:18,0:17:29.93:30,0,233	0/1:30,0:30:48.43:48,0,349	0/0:6,0:6:11.82:0,12,74	1/1:1,6:7:16.54:157,17,0	0/1:7,16:25:9.07:356,0,9	1/1:3,11:14:1.56:237,2,0	0/0:27,0:27:81.21:0,81,1033	0/0:29,0:29:81.23:0,81,1041	0/0:37,0:37:32.21:0,32,468	0/0:13,0:13:35.54:0,36,458
chr10	46037611	.	T	TAA	8077.72	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=4.224;DP=705;FS=7.593;HRun=10;HaplotypeScore=99.6718;InbreedingCoeff=0.9402;MQ=70.85;MQ0=7;MQRankSum=-1.153;QD=23.55;ReadPosRankSum=1.733;VQSLOD=4.2069;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:30:75.02:708,75,0	1/1:1,4:7:11.33:115,11,0	0/0:61,0:22:26.02:0,26,245	0/0:52,0:18:23.13:0,23,150	0/0:37,0:37:99:0,105,1067	1/1:31,0:31:55.01:613,55,0	1/1:23,0:23:27.20:426,27,0	1/1:27,0:27:22.65:483,23,0	1/1:19,0:19:7.17:342,7,0	0/0:24,0:25:62.86:0,63,665	0/0:28,0:29:65.77:0,66,639	1/1:18,0:18:45.06:425,45,0	1/1:27,0:27:34.02:449,34,0	0/0:17,0:17:39.07:0,39,396	1/1:3,17:21:36.12:520,36,0	0/0:25,0:25:57.09:0,57,579	0/0:26,0:26:72.07:0,72,713	0/0:18,0:18:48.10:0,48,488	1/1:4,14:19:49.89:661,50,0	1/1:5,22:30:75.21:1021,75,0	1/1:1,5:7:12.04:179,12,0	1/1:7,0:7:17.97:172,18,0	1/1:25,0:25:20.20:461,20,0	1/1:14,0:14:0.06:238,0,0	0/0:27,0:27:63.09:0,63,633	0/0:28,0:28:69.07:0,69,690	1/1:1,33:37:89.71:1265,90,0	0/0:13,0:13:29.97:0,30,293
chr10	46038763	.	TG	T	5437.80	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=14.212;DP=579;FS=2.982;HRun=6;HaplotypeScore=69.2512;InbreedingCoeff=0.9490;MQ=66.32;MQ0=8;MQRankSum=-1.910;QD=24.28;ReadPosRankSum=2.613;VQSLOD=4.9280;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,40:45:99:1128,105,0	0/0:9,0:9:24.05:0,24,297	0/1:13,0:8:2.29:2,0,143	0/0:21,0:17:37.22:0,37,434	0/0:28,0:27:72.23:0,72,944	1/1:0,26:26:66.16:709,66,0	1/1:0,14:14:33.08:355,33,0	1/1:3,11:14:33.05:343,33,0	1/1:1,19:20:48.12:515,48,0	0/0:27,0:27:78.24:0,78,1010	0/0:22,0:21:60.20:0,60,789	1/1:2,14:15:39.10:419,39,0	1/1:2,21:22:54.13:580,54,0	0/0:24,0:24:69.18:0,69,887	0/0:26,0:26:72.23:0,72,947	0/0:26,0:26:78.25:0,78,1026	0/0:32,0:32:96.29:0,96,1244	0/0:25,0:24:66.21:0,66,868	0/0:22,0:22:57.19:0,57,748	0/0:15,0:15:45.15:0,45,591	0/0:25,0:25:69.22:0,69,908	1/1:0,12:12:36.09:387,36,0	1/1:1,16:17:39.10:419,39,0	1/1:5,19:24:54.13:580,54,0	0/0:14,0:13:39.13:0,39,513	0/0:18,0:17:45.14:0,45,578	0/0:16,0:16:42.14:0,42,552	0/0:5,0:5:15.05:0,15,197
chr10	46038840	.	GA	G	2265.56	PASS	AB=0.941;AC=19;AF=0.365;AN=52;BaseQRankSum=9.148;DP=466;FS=38.556;HRun=8;HaplotypeScore=117.9258;InbreedingCoeff=0.8167;MQ=38.59;MQ0=42;MQRankSum=-4.918;QD=12.95;ReadPosRankSum=8.211;VQSLOD=0.3554;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,25:25:45.07:434,45,0	0/0:12,0:12:3.01:0,3,36	./.	./.	0/0:21,0:20:37.82:0,38,405	1/1:6,10:15:10.32:137,10,0	1/1:7,3:6:8.41:86,8,0	0/0:30,0:29:63.06:0,63,710	1/1:5,12:16:33.05:318,33,0	0/0:9,0:9:11.59:0,12,104	0/0:15,0:13:18.05:0,18,208	1/1:5,16:18:42.06:404,42,0	1/1:8,16:22:28.22:414,28,0	0/0:21,0:21:37.68:0,38,304	0/0:18,0:18:30:0,30,318	0/0:20,0:19:39.12:0,39,471	0/0:32,1:31:63.07:0,63,693	0/0:25,1:20:8.74:0,9,307	0/0:12,0:10:24.07:0,24,290	0/0:16,0:11:14.96:0,15,154	0/0:11,0:8:2.96:0,3,19	1/1:2,7:9:24.04:231,24,0	1/1:3,10:13:27.04:260,27,0	1/1:7,9:13:18.03:173,18,0	0/0:18,0:17:18.94:0,19,221	0/0:15,0:14:29.74:0,30,294	0/1:15,1:15:5.14:5,0,165	0/0:3,0:3:2.98:0,3,21
chr10	46038875	.	A	AAC	939.34	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=-3.711;DP=406;FS=25.520;HRun=0;HaplotypeScore=99.4479;InbreedingCoeff=0.5043;MQ=72.40;MQ0=5;MQRankSum=0.172;QD=6.76;ReadPosRankSum=-2.179;VQSLOD=0.7781;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:58.26:0,58,390	1/1:0,5:6:6.02:89,6,0	0/0:33,0:14:2.75:0,3,105	0/0:15,0:10:16.88:0,17,149	0/0:17,0:17:13.06:0,13,139	0/1:12,0:12:11.36:11,0,70	0/0:11,0:10:23.77:0,24,178	0/0:15,0:16:23.65:0,24,197	0/0:11,0:10:29.84:0,30,224	0/0:15,0:15:7.55:0,8,180	0/1:12,0:11:2.02:2,0,27	0/0:23,0:21:59.24:0,59,430	0/0:19,0:19:53.31:0,53,381	0/0:11,0:12:6.42:0,6,97	1/1:2,2:15:3.37:38,3,0	0/0:9,0:9:3.95:0,4,47	0/0:26,0:25:45.58:0,46,409	0/1:11,0:10:14.78:15,0,27	1/1:14,0:14:32.94:286,33,0	1/1:2,11:15:35.67:353,36,0	1/1:6,1:7:13.34:114,13,0	0/0:9,0:8:23.90:0,24,186	0/0:14,0:14:35.01:0,35,247	0/0:10,0:10:22.63:0,23,153	0/1:16,0:16:11.19:11,0,124	0/1:16,0:17:2.40:2,0,147	1/1:13,0:13:26.61:194,27,0	0/0:4,0:4:8.94:0,9,69
chr10	46041955	.	C	CT	6760.76	PASS	AB=0.738;AC=46;AF=0.821;AN=56;BaseQRankSum=-1.511;DP=569;FS=9.499;HRun=11;HaplotypeScore=80.5598;InbreedingCoeff=0.0908;MQ=72.01;MQ0=3;MQRankSum=-2.542;QD=12.31;ReadPosRankSum=1.694;VQSLOD=4.0836;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:10,2:33:33.94:265,34,0	1/1:4,3:7:6.01:61,6,0	0/1:21,0:20:0.76:1,0,66	0/1:16,0:11:3.59:4,0,50	1/1:9,23:34:1.19:584,1,0	1/1:0,0:11:28.41:143,28,0	1/1:5,1:16:28.57:159,29,0	1/1:30,1:40:56.02:313,56,0	1/1:3,0:18:34.22:177,34,0	0/1:15,6:21:61.08:156,0,61	0/1:6,10:16:10.44:256,0,10	1/1:3,2:19:33.67:181,34,0	1/1:6,2:23:39.84:214,40,0	0/1:8,9:17:10.86:263,0,11	0/1:7,10:18:17.25:239,0,17	1/1:4,21:26:53.94:532,54,0	0/0:18,0:20:42.91:0,43,313	1/1:8,21:30:33.38:489,33,0	1/1:10,8:19:26.88:241,27,0	1/1:8,14:24:1.41:353,1,0	1/1:2,2:4:6.01:61,6,0	1/1:2,2:12:25.86:150,26,0	1/1:5,1:23:42.56:213,43,0	1/1:2,0:10:25.57:128,26,0	1/1:5,14:20:2.68:391,3,0	0/1:12,20:35:24.90:497,0,25	1/1:3,16:20:48.08:479,48,0	0/1:4,8:12:32.95:211,0,33
chr10	46046685	.	CCCCTCCCT	C	3637.70	PASS	AC=18;AF=0.500;AN=36;BaseQRankSum=6.828;DP=257;FS=7.924;HRun=0;HaplotypeScore=76.8223;InbreedingCoeff=0.7168;MQ=63.58;MQ0=1;MQRankSum=-6.923;QD=24.75;ReadPosRankSum=3.201;VQSLOD=2.1430;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:10,14:24:24.08:615,24,0	0/0:5,0:5:5.98:0,6,145	./.	./.	0/0:6,0:6:6.01:0,6,119	1/1:2,10:12:18.06:458,18,0	1/1:7,12:19:9.03:232,9,0	0/0:9,0:8:3.01:0,3,95	1/1:6,9:15:21.07:540,21,0	0/0:3,0:3:3.01:0,3,57	./.	1/1:12,10:22:18.53:464,19,0	1/1:6,16:22:36.08:865,36,0	0/0:3,0:3:2.99:0,3,24	0/0:4,0:4:9.02:0,9,247	./.	0/0:13,0:13:15.03:0,15,453	./.	./.	./.	0/0:30,0:30:36.10:0,36,1260	1/1:7,6:13:9.03:232,9,0	1/1:3,2:5:3.01:77,3,0	1/1:8,7:15:6.02:154,6,0	./.	./.	0/0:6,0:6:6:0,6,149	./.
chr10	46047930	.	AC	A	7563.91	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=20.027;DP=732;FS=1.754;HRun=1;HaplotypeScore=130.8083;InbreedingCoeff=0.9996;MQ=91.10;MQ0=0;MQRankSum=-7.869;QD=36.19;ReadPosRankSum=1.797;VQSLOD=4.5730;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,43:43:99:1587,117,0	0/0:10,0:10:30.09:0,30,455	0/0:31,0:31:93.04:0,93,1362	0/0:30,0:30:81.26:0,81,1215	0/0:36,0:36:99:0,108,1724	1/1:0,17:17:36.06:471,36,0	1/1:0,24:24:63.12:833,63,0	0/0:41,0:41:99:0,123,1901	1/1:1,14:15:42.14:586,42,0	0/0:27,0:27:81.28:0,81,1295	0/0:13,0:13:39.13:0,39,623	1/1:0,21:21:63.21:879,63,0	1/1:0,22:22:60.20:837,60,0	0/0:27,0:27:81.27:0,81,1274	0/0:26,0:26:78.27:0,78,1247	0/0:36,0:36:99:0,108,1706	0/0:35,0:33:99:0,105,1679	0/0:20,0:20:60.20:0,60,959	0/0:31,0:31:89.43:0,89,1372	0/0:23,0:23:69.22:0,69,1080	0/0:34,0:34:99:0,99,1535	1/1:1,23:23:66.17:897,66,0	1/1:0,20:20:51.17:711,51,0	1/1:0,23:23:57.11:763,57,0	0/0:34,0:33:99:0,102,1609	0/0:27,0:27:81.27:0,81,1274	0/0:34,0:34:99:0,102,1631	0/0:8,0:8:24.08:0,24,384
chr10	46049882	.	A	AAGCAGC	2874.48	PASS	AB=1.000;AC=15;AF=0.300;AN=50;BaseQRankSum=-1.992;DP=518;FS=8.146;HRun=0;HaplotypeScore=122.1772;InbreedingCoeff=0.6864;MQ=70.01;MQ0=1;MQRankSum=-6.931;QD=24.36;ReadPosRankSum=-2.112;VQSLOD=2.5590;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:12.03:0,12,212	./.	0/0:15,0:13:18.02:0,18,276	0/1:27,0:24:24.35:24,0,111	./.	0/0:7,0:7:8.99:0,9,144	0/0:36,0:36:63.19:0,63,1235	0/0:11,0:11:9.03:0,9,153	0/0:30,0:30:60.18:0,60,1173	1/1:8,1:11:6.02:141,6,0	1/1:2,0:2:3:25,3,0	0/0:33,0:33:63.20:0,63,1269	0/0:23,0:23:54.16:0,54,1069	1/1:15,12:28:42.08:1226,42,0	0/0:23,0:23:60.16:0,60,1089	1/1:9,15:26:39.13:1231,39,0	0/0:50,0:49:93.32:0,93,1927	1/1:4,8:13:9.03:294,9,0	0/0:18,0:18:21:0,21,374	0/0:5,0:5:3:0,3,25	0/0:42,0:42:42.10:0,42,727	0/0:9,0:9:9.03:0,9,176	./.	0/0:46,0:46:99:0,105,2090	0/0:7,0:7:0:0,0,0	1/1:9,0:9:3.84:21,4,0	0/0:25,0:25:51.14:0,51,982	1/1:2,0:2:3.01:76,3,0
chr10	46059467	.	T	TG	4399.55	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-10.363;DP=746;FS=0.359;HRun=7;HaplotypeScore=69.8518;InbreedingCoeff=0.9997;MQ=82.79;MQ0=0;MQRankSum=-0.793;QD=29.93;ReadPosRankSum=1.393;VQSLOD=5.2379;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:72.12:0,72,695	1/1:0,11:11:33.10:398,33,0	0/0:22,0:22:57.07:0,57,545	0/0:19,0:19:50.95:0,51,461	0/0:19,0:19:51.07:0,51,487	0/0:28,0:28:75.12:0,75,724	0/0:33,0:33:87.13:0,87,840	0/0:38,0:38:99:0,102,977	0/0:36,0:36:99:0,108,1043	0/0:21,0:21:60.09:0,60,576	0/0:24,0:24:66.10:0,66,637	0/0:28,0:28:78.12:0,78,753	0/0:41,0:41:99:0,120,1153	0/0:25,0:25:63.10:0,63,608	1/1:4,37:41:99:1232,102,0	0/0:36,0:36:99:0,102,980	0/0:30,0:29:84.13:0,84,811	0/0:21,0:21:51.06:0,51,485	1/1:3,12:15:36.11:435,36,0	1/1:2,24:27:66.06:764,66,0	1/1:2,22:25:69.04:810,69,0	0/0:26,0:26:69.11:0,69,666	0/0:22,0:22:60.10:0,60,579	0/0:28,0:28:78.12:0,78,753	0/0:23,0:23:57.07:0,57,550	0/0:44,0:44:99:0,120,1144	1/1:4,24:28:63.19:761,63,0	0/0:9,0:9:26.95:0,27,237
chr10	46060280	.	G	GTT	3933.21	PASS	AB=0.672;AC=36;AF=0.643;AN=56;BaseQRankSum=-6.617;DP=692;FS=10.147;HRun=11;HaplotypeScore=121.4702;InbreedingCoeff=0.6115;MQ=68.93;MQ0=0;MQRankSum=-2.099;QD=7.64;ReadPosRankSum=1.991;VQSLOD=0.6826;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,2:46:34.08:319,34,0	0/0:12,0:12:4.97:0,5,91	0/0:17,0:21:35.20:0,35,246	0/1:11,0:11:30.51:31,0,139	1/1:7,2:34:15.51:285,16,0	1/1:5,0:22:1.35:65,1,0	1/1:5,2:22:41.47:242,41,0	1/1:17,1:34:49.31:491,49,0	1/1:6,1:20:43.45:215,43,0	1/1:4,1:30:56.49:254,56,0	1/1:6,3:32:1.63:203,2,0	1/1:4,1:24:45.73:194,46,0	1/1:4,1:25:17.60:186,18,0	1/1:5,0:19:35.93:173,36,0	0/0:30,0:31:46.28:0,46,272	1/1:2,1:31:50.42:206,50,0	0/0:16,0:18:32.88:0,33,412	0/1:3,0:11:6.13:46,0,6	0/0:24,0:24:13.95:0,14,204	0/0:16,0:16:11.32:0,11,138	0/0:21,0:21:43.43:0,43,213	0/1:5,0:27:4.30:120,0,4	1/1:6,2:33:32.20:238,32,0	1/1:1,0:23:52.40:180,52,0	1/1:3,0:21:40.43:156,40,0	1/1:6,2:35:41.56:280,42,0	0/0:34,0:34:5.50:0,6,299	0/1:3,0:14:29.73:49,0,30
chr10	46060735	.	A	AAAAC	1085.90	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-1.920;DP=753;FS=15.186;HRun=0;HaplotypeScore=120.0468;InbreedingCoeff=0.8339;MQ=65.43;MQ0=5;MQRankSum=-2.870;QD=28.58;ReadPosRankSum=-5.086;VQSLOD=1.4294;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:49.35:0,49,1119	0/0:12,0:12:21.07:0,21,344	0/0:31,0:25:51.12:0,51,723	0/0:24,0:20:20.34:0,20,280	0/0:30,0:30:75.23:0,75,1159	0/0:29,0:29:60.19:0,60,958	0/0:15,0:15:30.09:0,30,469	1/1:24,12:38:62.84:1181,63,0	0/0:29,0:29:72.21:0,72,1077	0/0:27,0:27:39.13:0,39,634	0/0:31,0:32:75.23:0,75,1162	0/0:22,0:22:54.18:0,54,879	0/0:39,0:39:87.28:0,87,1380	0/0:30,0:30:66.22:0,66,1059	0/0:31,0:31:66.23:0,66,1081	0/0:42,0:42:99:0,105,1669	0/0:26,0:26:45.15:0,45,737	0/0:10,0:10:2.52:0,3,257	0/0:23,0:21:48.15:0,48,730	0/0:41,0:42:90.26:0,90,1382	0/0:15,0:15:30.07:0,30,441	0/0:30,0:30:75.24:0,75,1182	0/0:23,0:23:60.20:0,60,983	0/0:19,0:19:51.16:0,51,798	0/0:28,0:28:66.20:0,66,995	0/0:25,0:25:60.20:0,60,962	0/0:38,0:37:78.26:0,78,1253	0/0:11,0:11:33.11:0,33,541
chr10	46062269	.	G	GT	4043.03	PASS	AB=0.955;AC=21;AF=0.375;AN=56;BaseQRankSum=-0.669;DP=608;FS=0.783;HRun=7;HaplotypeScore=105.9448;InbreedingCoeff=0.7801;MQ=63.70;MQ0=5;MQRankSum=-8.328;QD=14.97;ReadPosRankSum=-1.242;VQSLOD=3.1290;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:42.40:0,42,387	0/1:9,1:10:6.13:6,0,216	0/1:34,0:15:15:15,0,74	0/1:21,1:10:18.83:19,0,66	1/1:23,11:34:44.83:523,45,0	0/0:15,0:15:15.37:0,15,227	0/0:7,0:7:17.38:0,17,145	0/0:31,0:31:76.38:0,76,694	0/0:24,0:24:43.14:0,43,377	1/1:14,8:22:31.70:443,32,0	1/1:13,9:21:43.68:455,44,0	0/0:25,0:25:44.83:0,45,390	0/0:19,0:19:37.30:0,37,311	1/1:15,4:19:27.11:288,27,0	0/0:20,0:20:34.98:0,35,282	1/1:12,11:23:44.99:501,45,0	0/0:25,0:25:60.33:0,60,588	1/1:8,3:11:23.36:270,23,0	0/0:17,0:17:50.92:0,51,459	0/0:24,0:24:58.65:0,59,488	0/0:10,0:9:17.60:0,18,146	0/0:21,0:21:48.43:0,48,406	0/0:23,1:24:13.24:0,13,347	0/0:16,0:16:29.97:0,30,267	1/1:18,10:28:48.38:577,48,0	1/1:16,10:27:54.55:590,55,0	0/0:27,0:26:53.57:0,54,462	1/1:12,6:18:29.33:357,29,0
chr10	46062278	.	G	GTT	7590.01	PASS	AB=0.717;AC=49;AF=0.875;AN=56;BaseQRankSum=-1.184;DP=635;FS=1.365;HRun=14;HaplotypeScore=106.4677;InbreedingCoeff=0.6104;MQ=60.44;MQ0=5;MQRankSum=0.384;QD=13.58;ReadPosRankSum=-1.646;VQSLOD=3.6630;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,18:33:38.25:408,38,0	1/1:4,7:13:21.06:253,21,0	0/0:33,0:13:6.85:0,7,53	0/0:18,0:7:8.91:0,9,45	1/1:26,0:33:35.90:318,36,0	1/1:2,6:18:28.25:268,28,0	1/1:3,5:9:18.05:225,18,0	0/1:20,1:33:14.60:156,0,15	1/1:1,20:22:26.72:459,27,0	1/1:27,0:29:40.22:280,40,0	1/1:20,0:22:29.70:271,30,0	1/1:7,18:27:9.75:342,10,0	1/1:6,12:20:26.45:321,26,0	1/1:10,0:14:2.77:100,3,0	1/1:4,10:19:28.49:300,28,0	1/1:18,0:23:37.08:319,37,0	0/0:23,0:24:59.43:0,59,483	1/1:9,0:10:5.93:36,6,0	1/1:10,4:18:4.77:241,5,0	1/1:7,14:26:54.02:547,54,0	1/1:0,10:11:17.42:205,17,0	1/1:7,15:23:0.09:456,0,0	1/1:5,15:22:38.24:428,38,0	1/1:2,14:18:27.09:354,27,0	1/1:24,0:29:40.48:352,40,0	1/1:21,3:36:53.70:456,54,0	1/1:11,15:27:26.44:309,26,0	1/1:16,0:20:18.11:184,18,0
chr10	46064661	.	TC	T	1312	PASS	AB=0.971;AC=21;AF=0.375;AN=56;BaseQRankSum=-0.569;DP=452;FS=27.361;HRun=2;HaplotypeScore=56.6076;InbreedingCoeff=0.8979;MQ=45.19;MQ0=54;MQRankSum=-4.864;QD=8.25;ReadPosRankSum=2.280;VQSLOD=-0.5640;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:15:35.41:223,35,0	0/0:6,0:5:10.72:0,11,64	0/0:35,0:3:2.04:0,2,29	0/1:32,1:2:0:0,0,0	0/0:26,0:26:41:0,41,288	1/1:14,0:14:26.96:154,27,0	1/1:9,0:8:17.68:108,18,0	1/1:8,0:7:11.88:81,12,0	1/1:9,0:9:23.73:165,24,0	0/0:17,0:16:23.86:0,24,187	0/0:8,0:7:8.82:0,9,57	1/1:17,0:17:44.27:279,44,0	1/1:0,10:10:5.91:51,6,0	0/0:13,0:12:23.82:0,24,182	0/0:18,0:17:41.41:0,41,301	0/0:11,0:10:23.96:0,24,207	0/0:29,0:28:53.87:0,54,460	0/0:18,0:18:14.98:0,15,124	0/0:14,0:12:32.91:0,33,292	0/0:15,0:14:35.97:0,36,313	0/0:6,0:5:11.98:0,12,98	1/1:9,1:10:20.27:126,20,0	1/1:13,0:12:17.54:128,18,0	1/1:20,1:19:32.43:206,32,0	0/0:20,0:18:35.87:0,36,289	0/0:20,0:19:44.86:0,45,370	0/0:20,0:19:38.70:0,39,321	0/0:17,0:12:17.56:0,18,132
chr10	46069533	.	A	AGT	13066.92	PASS	AB=0.617;AC=27;AF=0.482;AN=56;BaseQRankSum=-16.652;DP=853;FS=0.596;HRun=0;HaplotypeScore=95.1366;InbreedingCoeff=0.7857;MQ=73.35;MQ0=4;MQRankSum=-0.309;QD=32.18;ReadPosRankSum=1.254;VQSLOD=6.7498;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:64,0:64:99:0,159,1931	0/1:4,4:8:21.57:179,0,22	0/0:32,0:25:36:0,36,415	0/0:35,0:28:44.40:0,44,507	1/1:4,24:28:35.79:1050,36,0	0/0:20,0:20:42.13:0,42,513	0/0:25,0:26:59.98:0,60,694	0/0:42,0:42:81.22:0,81,946	0/0:27,0:27:48.15:0,48,586	1/1:6,27:34:86.43:1259,86,0	1/1:5,19:24:51.09:794,51,0	0/0:32,0:32:81.19:0,81,960	0/0:30,0:30:81.23:0,81,976	1/1:7,26:33:29.55:984,30,0	1/1:7,22:30:54.18:873,54,0	1/1:7,19:28:51.17:826,51,0	0/0:40,0:41:99:0,105,1215	1/1:7,24:31:69.24:1118,69,0	0/1:5,13:18:34.26:446,0,34	1/1:6,24:30:72.16:1135,72,0	0/1:11,21:32:43.80:857,0,44	0/0:25,0:25:69.21:0,69,834	0/0:34,0:34:87.27:0,87,1063	0/0:39,0:39:93.28:0,93,1126	1/1:7,22:30:29.56:984,30,0	1/1:7,25:33:84.20:1248,84,0	1/1:7,19:26:35.92:583,36,0	1/1:2,19:21:45.15:729,45,0
chr10	46080602	.	A	AC	26541.91	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=4.492;DP=745;FS=1.002;HRun=1;HaplotypeScore=144.0767;InbreedingCoeff=0.9999;MQ=79.34;MQ0=0;MQRankSum=-6.238;QD=39.73;ReadPosRankSum=3.067;VQSLOD=4.4396;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,35:38:99:1483,99,0	1/1:0,15:15:36.12:539,36,0	0/0:16,0:16:36.05:0,36,456	0/0:21,0:21:42.21:0,42,511	1/1:0,25:25:69.23:1032,69,0	1/1:1,18:19:51.17:764,51,0	1/1:2,22:24:63.21:943,63,0	1/1:1,31:32:96.29:1396,96,0	1/1:2,25:27:66.06:987,66,0	1/1:1,35:36:99:1526,102,0	1/1:1,26:27:75.25:1114,75,0	1/1:0,29:29:84.28:1256,84,0	1/1:1,21:22:60.20:898,60,0	1/1:0,23:23:63.21:944,63,0	1/1:1,34:35:90.30:1346,90,0	1/1:0,29:29:81.27:1214,81,0	0/0:40,0:40:99:0,114,1413	1/1:2,29:31:81.27:1214,81,0	1/1:3,22:25:69.23:1033,69,0	1/1:1,24:25:72.24:1077,72,0	1/1:5,42:47:99:1693,114,0	1/1:2,17:19:48.16:718,48,0	1/1:0,19:19:51.17:760,51,0	1/1:2,30:32:78.26:1169,78,0	1/1:0,22:22:54.18:809,54,0	1/1:0,21:21:63.21:943,63,0	1/1:4,27:30:75.22:1099,75,0	1/1:0,15:15:39.13:584,39,0
chr10	46083145	.	G	GAA	1208.99	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-5.995;DP=706;FS=2.231;HRun=7;HaplotypeScore=87.4911;InbreedingCoeff=0.9886;MQ=74.50;MQ0=1;MQRankSum=-1.226;QD=37.78;ReadPosRankSum=-4.436;VQSLOD=2.4506;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:75.75:0,76,998	0/0:9,0:9:27.08:0,27,314	0/0:29,0:28:47.63:0,48,476	0/0:25,0:22:17:0,17,341	0/0:34,0:34:90.22:0,90,1026	0/0:33,0:33:81.19:0,81,929	0/0:31,0:31:84.23:0,84,978	1/1:3,27:32:85.71:1304,86,0	0/0:17,0:17:48.14:0,48,558	0/0:18,0:18:51.13:0,51,578	0/0:22,0:22:60.17:0,60,698	0/0:32,0:32:78.20:0,78,907	0/0:24,0:24:57.15:0,57,659	0/0:27,0:27:69.20:0,69,804	0/0:39,0:39:99:0,102,1143	0/0:25,0:25:69.18:0,69,792	0/0:21,0:21:48.92:0,49,585	0/0:19,0:19:54.14:0,54,619	0/0:30,0:30:84.19:0,84,952	0/0:22,0:22:57.14:0,57,653	0/0:23,0:23:63.15:0,63,711	0/0:21,0:21:60.15:0,60,676	0/0:18,0:18:54.15:0,54,618	0/0:23,0:23:69.18:0,69,791	0/0:12,0:12:33.10:0,33,384	0/0:32,0:32:87.24:0,87,999	0/0:40,0:39:99:0,105,1220	0/0:15,0:15:39.10:0,39,454
chr10	46083377	.	AG	A	7948.30	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=13.031;DP=622;FS=8.068;HRun=1;HaplotypeScore=63.4081;InbreedingCoeff=0.9978;MQ=59.77;MQ0=2;MQRankSum=-0.398;QD=38.77;ReadPosRankSum=3.568;VQSLOD=5.3537;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:51.17:0,51,814	0/0:7,0:7:21.07:0,21,336	0/0:12,0:9:27.08:0,27,384	0/0:11,0:7:18.06:0,18,287	1/1:0,29:29:78.22:1069,78,0	0/0:19,0:19:57.19:0,57,909	0/0:19,0:19:48.15:0,48,740	0/0:40,0:40:99:0,117,1861	0/0:26,0:26:78.27:0,78,1245	1/1:0,23:23:69.23:963,69,0	1/1:0,22:22:63.21:881,63,0	0/0:23,0:23:69.24:0,69,1098	0/0:24,0:24:69.22:0,69,1077	1/1:0,13:13:39.13:545,39,0	0/0:28,0:28:84.29:0,84,1343	1/1:0,25:25:72.24:1007,72,0	0/0:24,0:24:72.22:0,72,1119	1/1:0,24:24:60.20:839,60,0	0/0:17,0:16:45.12:0,45,720	0/0:36,0:36:99:0,105,1679	0/0:16,0:16:42.14:0,42,671	0/0:25,0:25:75.26:0,75,1196	0/0:24,0:24:72.23:0,72,1128	0/0:16,0:16:38.73:0,39,623	1/1:0,31:31:84.28:1175,84,0	1/1:0,26:26:75.25:1049,75,0	0/0:29,0:28:87.30:0,87,1385	1/1:0,12:12:30.10:420,30,0
chr10	46084901	.	T	TGCACAGGCTTCCCAGAG	23820.63	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-8.193;DP=680;FS=1.241;HRun=0;HaplotypeScore=223.0903;InbreedingCoeff=0.9632;MQ=80.82;MQ0=2;MQRankSum=-13.641;QD=84.77;ReadPosRankSum=0.470;VQSLOD=4.5989;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,12:44:45.15:3708,45,0	0/0:9,0:9:27.08:0,27,1000	0/0:21,0:22:58.99:0,59,1967	0/0:23,0:23:46.08:0,46,1657	0/0:28,0:28:84.24:0,84,3518	1/1:0,4:17:12.04:1008,12,0	1/1:0,4:27:12.04:1007,12,0	1/1:44,0:44:99:5782,129,0	1/1:1,5:14:15.05:1259,15,0	0/0:25,0:25:75.24:0,75,3166	0/0:16,0:16:48.16:0,48,2258	1/1:0,19:41:57.20:4785,57,0	1/1:2,10:31:33.11:2766,33,0	0/0:26,0:26:78.23:0,78,3405	0/0:28,0:28:84.27:0,84,3817	0/0:21,0:21:63.20:0,63,2713	0/0:32,0:32:96.29:0,96,4247	0/0:20,0:20:57.17:0,57,2730	0/0:21,0:21:63.18:0,63,2677	0/0:26,0:26:78.27:0,78,3468	0/0:38,0:38:99:0,108,4719	1/1:0,8:23:27.09:2248,27,0	1/1:1,3:18:8.83:755,9,0	1/1:1,3:20:6.02:503,6,0	0/0:18,0:18:51.15:0,51,2251	0/0:18,0:18:51.18:0,51,2175	0/0:16,0:16:48.15:0,48,2026	0/0:12,0:12:36.12:0,36,1629
chr10	46085626	.	C	CTTT	5908.04	PASS	AB=0.693;AC=44;AF=0.786;AN=56;BaseQRankSum=-0.977;DP=628;FS=1.479;HRun=15;HaplotypeScore=110.8088;InbreedingCoeff=0.4351;MQ=66.67;MQ0=11;MQRankSum=-4.157;QD=10.84;ReadPosRankSum=-3.388;VQSLOD=1.5401;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:8,3:36:20.02:295,0,20	0/1:11,0:15:16.69:17,0,83	0/0:24,0:18:7.05:0,7,137	0/0:11,0:8:8.53:0,9,68	1/1:17,14:36:41.32:426,41,0	1/1:8,11:22:26.04:353,26,0	1/1:10,8:22:32.05:393,32,0	1/1:28,0:30:29.03:342,29,0	1/1:7,0:22:10.93:254,11,0	1/1:21,3:25:25.17:280,25,0	1/1:5,3:19:35.52:429,36,0	1/1:8,0:20:16.64:119,17,0	1/1:1,0:18:14.57:113,15,0	1/1:11,7:20:18.06:251,18,0	1/1:9,0:18:0.32:6,0,0	1/1:7,13:21:35.11:486,35,0	0/0:19,0:22:27.74:0,28,242	1/1:3,10:18:33.02:432,33,0	0/1:11,0:16:39.67:74,0,40	0/1:12,0:27:22.23:76,0,22	1/1:12,0:26:20.18:94,20,0	1/1:6,0:19:28.99:235,29,0	1/1:9,2:19:9.66:98,10,0	1/1:7,0:26:26.04:186,26,0	1/1:7,8:19:22.24:265,22,0	1/1:8,9:21:38.99:446,39,0	0/0:10,0:23:1.21:0,1,99	1/1:5,3:14:19.57:236,20,0
chr10	46085822	.	C	CTTA	16695.34	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-0.819;DP=502;FS=1.220;HRun=0;HaplotypeScore=95.8630;InbreedingCoeff=0.9965;MQ=74.92;MQ0=0;MQRankSum=-8.184;QD=47.84;ReadPosRankSum=1.019;VQSLOD=6.6700;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,27:30:72.20:1513,72,0	0/0:5,0:5:15.05:0,15,250	0/0:15,0:15:45.15:0,45,725	0/0:23,0:23:57.08:0,57,874	1/1:3,20:23:59.73:1056,60,0	1/1:6,12:15:38.87:655,39,0	1/1:2,19:20:57.11:1180,57,0	0/0:28,0:28:69.24:0,69,1142	1/1:5,10:15:33.04:651,33,0	1/1:3,14:17:51.16:1075,51,0	1/1:5,14:19:53.91:901,54,0	1/1:2,10:11:30.10:629,30,0	1/1:3,11:14:33.01:631,33,0	1/1:4,11:13:30.03:627,30,0	0/0:17,0:17:48.16:0,48,796	1/1:4,18:22:60.12:1234,60,0	0/0:11,0:11:27.09:0,27,450	1/1:5,18:21:39.06:745,39,0	0/0:13,0:13:33.11:0,33,550	0/0:14,0:14:42.14:0,42,699	0/0:15,0:15:42.14:0,42,690	1/1:2,13:15:41.71:619,42,0	1/1:2,21:23:62.90:1073,63,0	1/1:8,16:24:56.79:1173,57,0	1/1:6,12:18:41.89:713,42,0	1/1:8,24:31:84.29:1845,84,0	0/0:12,0:12:30.10:0,30,500	1/1:0,7:7:20.96:377,21,0
chr10	46085864	.	TGG	T	5217.04	PASS	AB=1.000;AC=43;AF=0.827;AN=52;BaseQRankSum=0.205;DP=473;FS=5.996;HRun=14;HaplotypeScore=129.4413;InbreedingCoeff=0.5441;MQ=67.79;MQ0=1;MQRankSum=-3.507;QD=12.57;ReadPosRankSum=4.804;VQSLOD=3.3628;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,0:21:38.33:164,38,0	./.	0/1:22,0:18:21.18:21,0,138	0/0:16,0:13:14.83:0,15,130	1/1:5,17:22:48.03:444,48,0	1/1:1,0:19:43.91:189,44,0	1/1:6,0:18:30.06:129,30,0	1/1:21,0:21:11.59:89,12,0	1/1:3,0:20:44.80:190,45,0	1/1:4,15:19:41.71:388,42,0	1/1:4,15:19:41.83:388,42,0	1/1:1,0:15:35.55:152,36,0	1/1:2,0:17:38.36:164,38,0	1/1:4,15:17:41.89:380,42,0	0/0:10,0:10:0:0,0,0	1/1:5,20:25:59.84:541,60,0	1/1:12,0:12:2.94:25,3,0	1/1:6,7:13:20.91:194,21,0	./.	0/0:15,0:15:0:0,0,0	0/0:8,0:8:0:0,0,0	1/1:2,0:11:27.25:118,27,0	1/1:5,0:21:43.70:186,44,0	1/1:5,0:18:24.69:98,25,0	1/1:4,16:20:41.82:382,42,0	1/1:6,23:28:74.94:670,75,0	1/1:13,0:13:6.67:29,7,0	1/1:3,15:18:29.94:277,30,0
chr10	46085871	.	GGGGGGGGA	G	806.65	PASS	AB=1.000;AC=4;AF=0.074;AN=54;BaseQRankSum=-4.536;DP=455;FS=1.647;HRun=0;HaplotypeScore=187.4702;InbreedingCoeff=0.3254;MQ=70.14;MQ0=1;MQRankSum=-1.620;QD=19.21;ReadPosRankSum=-4.028;VQSLOD=1.9207;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:28.97:0,29,221	0/0:3,0:3:2.22:0,2,25	0/0:24,0:19:29.79:0,30,1008	0/0:18,0:15:36.11:0,36,846	0/0:21,0:21:60.21:0,60,1386	0/0:20,0:18:45.41:0,45,225	0/0:18,0:18:33.64:0,34,293	1/1:5,15:20:50.93:877,51,0	0/0:18,0:18:44.95:0,45,221	0/0:21,0:21:57.11:0,57,1175	0/0:20,0:20:51.16:0,51,1044	0/0:16,0:15:38.43:0,38,206	0/0:16,0:16:38.30:0,38,176	0/0:19,0:17:45.10:0,45,947	0/0:13,0:13:0.25:0,0,132	0/0:26,0:26:75.08:0,75,1554	0/0:10,0:10:27.02:0,27,680	0/0:11,0:11:27.08:0,27,551	./.	0/0:8,0:8:2.23:0,2,18	0/1:9,0:8:17.07:20,0,17	0/0:12,0:12:26.59:0,27,113	0/0:17,0:17:41.71:0,42,190	0/0:15,0:15:24.23:0,24,132	0/0:20,0:20:51.16:0,51,1040	0/0:27,0:26:78.26:0,78,1638	0/1:13,0:13:22.61:23,0,67	0/0:18,0:18:39.13:0,39,895
chr10	46085874	.	GGGGGA	G	4975.34	PASS	AB=1.000;AC=31;AF=0.554;AN=56;BaseQRankSum=-5.446;DP=453;FS=0.792;HRun=0;HaplotypeScore=147.4806;InbreedingCoeff=0.8587;MQ=68.66;MQ0=1;MQRankSum=-4.381;QD=22.62;ReadPosRankSum=-0.340;VQSLOD=4.6888;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:19:26.43:379,26,0	1/1:3,0:3:8.99:77,9,0	0/0:22,0:17:37.67:0,38,599	0/0:17,0:15:26.06:0,26,481	0/0:21,0:21:59.97:0,60,622	1/1:20,0:18:48.07:483,48,0	0/1:17,0:17:20.89:307,0,21	1/1:15,0:17:48.48:504,48,0	1/1:19,0:19:7.37:496,7,0	0/0:23,0:23:60.04:0,60,571	0/0:19,0:19:48.03:0,48,448	1/1:16,0:15:22.11:392,22,0	1/1:15,1:16:42.11:476,42,0	0/0:18,0:16:39.06:0,39,378	1/1:13,0:13:26.96:227,27,0	0/0:25,0:25:64.82:0,65,642	0/0:9,0:9:26.93:0,27,353	0/0:10,0:10:21.04:0,21,207	1/1:4,0:4:5.99:49,6,0	1/1:10,0:10:12:102,12,0	1/1:6,1:6:9:78,9,0	1/1:10,2:12:33.02:409,33,0	1/1:18,0:18:4.42:470,4,0	1/1:13,2:15:13.39:243,13,0	0/0:21,0:21:45.52:0,46,433	0/0:29,0:28:76.70:0,77,700	1/1:11,3:14:25.60:282,26,0	0/0:18,0:18:36.07:0,36,394
chr10	46085878	.	GA	G	997.99	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=-4.858;DP=447;FS=2.292;HRun=1;HaplotypeScore=125.0999;InbreedingCoeff=0.8302;MQ=64.08;MQ0=1;MQRankSum=0.164;QD=12.17;ReadPosRankSum=-5.830;VQSLOD=0.1195;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:45.11:0,45,215	1/1:3,0:3:9:77,9,0	0/0:18,0:14:34.64:0,35,294	0/0:13,1:11:0.35:0,0,148	0/0:23,0:23:47.72:0,48,255	0/0:22,0:20:40.31:0,40,171	0/0:17,0:17:36.54:0,37,175	1/1:17,0:17:27.20:271,27,0	0/0:20,0:20:35.75:0,36,179	0/0:24,0:24:48.29:0,48,344	0/0:17,0:17:36.13:0,36,187	0/0:16,0:15:26.17:0,26,111	0/0:18,0:18:27.66:0,28,122	0/0:18,0:16:9.53:0,10,107	1/1:14,0:14:29.92:246,30,0	0/0:23,0:23:54.14:0,54,266	0/0:9,0:9:9.71:0,10,163	0/0:8,0:8:21.82:0,22,105	1/1:1,5:6:14.92:113,15,0	1/1:8,0:8:17.83:153,18,0	1/1:7,0:6:11.99:103,12,0	0/1:12,0:12:19.31:19,0,21	0/0:19,0:19:32:0,32,148	0/0:15,0:15:21.10:0,21,91	0/0:20,0:20:45.51:0,46,253	0/0:27,0:26:62.01:0,62,348	1/1:15,0:15:29.49:208,29,0	0/0:17,0:17:34.08:0,34,185
chr10	46089816	.	T	TCACCTG	9341.23	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-7.082;DP=640;FS=2.511;HRun=0;HaplotypeScore=129.7699;InbreedingCoeff=0.9783;MQ=88.59;MQ0=0;MQRankSum=-13.456;QD=51.33;ReadPosRankSum=0.304;VQSLOD=5.1006;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:63.22:0,63,1299	0/0:3,0:3:6.02:0,6,128	0/0:26,0:26:42.13:0,42,812	0/0:24,0:24:27.06:0,27,482	1/1:6,11:21:20.86:629,21,0	0/0:26,0:26:54.17:0,54,1072	0/0:29,0:29:66.19:0,66,1239	0/0:27,0:27:45.15:0,45,931	0/0:22,0:22:57.20:0,57,1178	1/1:19,9:29:39.12:1168,39,0	1/1:5,5:12:15.05:419,15,0	0/0:25,0:25:60.19:0,60,1278	0/0:37,0:37:96.24:0,96,1864	1/1:8,12:23:42.14:1393,42,0	0/0:26,0:26:54.16:0,54,1062	1/1:10,6:18:30.10:933,30,0	0/0:29,0:29:72.25:0,72,1515	1/1:5,9:18:30.10:936,30,0	0/0:18,0:18:27.09:0,27,511	0/0:19,0:19:42.14:0,42,872	0/0:45,0:45:99:0,102,2081	0/0:12,0:12:24.08:0,24,510	0/0:17,0:17:27.09:0,27,524	0/0:20,0:20:45.15:0,45,906	1/1:4,8:14:18.06:597,18,0	1/1:9,17:30:66.19:1977,66,0	0/0:24,0:24:60.21:0,60,1254	1/1:5,12:17:39.13:1289,39,0
chr10	46090969	.	C	CA	8786.99	PASS	AB=1.000;AC=37;AF=0.661;AN=56;BaseQRankSum=1.809;DP=746;FS=10.113;HRun=10;HaplotypeScore=106.3203;InbreedingCoeff=0.9045;MQ=63.66;MQ0=3;MQRankSum=-0.271;QD=17.20;ReadPosRankSum=3.027;VQSLOD=4.4192;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:41,0:41:99:605,102,0	0/0:8,0:8:11.90:0,12,89	0/1:27,0:11:11.03:11,0,51	0/0:23,0:10:6.54:0,7,24	1/1:6,27:33:73.88:732,74,0	1/1:23,0:22:55.63:339,56,0	1/1:15,0:15:26.02:147,26,0	0/0:32,0:32:62.85:0,63,511	1/1:25,0:25:58.53:349,59,0	1/1:10,24:34:20.16:591,20,0	1/1:5,27:33:31.82:721,32,0	1/1:29,0:29:78.89:463,79,0	1/1:21,0:21:50.18:324,50,0	1/1:6,21:27:47.91:492,48,0	0/0:31,0:31:74.85:0,75,607	1/1:7,25:33:35.03:565,35,0	0/0:28,1:29:33.87:0,34,480	1/1:3,22:26:63.03:653,63,0	0/0:30,0:31:76.87:0,77,611	0/0:39,1:40:66.97:0,67,741	0/0:11,0:11:26.95:0,27,218	1/1:24,0:24:53.01:344,53,0	1/1:24,1:25:61.67:400,62,0	1/1:17,0:17:34.69:193,35,0	1/1:5,27:33:57.82:748,58,0	1/1:5,23:28:69.08:705,69,0	0/0:30,0:30:38.45:0,38,468	1/1:2,14:17:20.30:405,20,0
chr10	46090972	.	A	AC	7637.40	PASS	AB=1.000;AC=28;AF=0.500;AN=56;BaseQRankSum=8.103;DP=738;FS=0.601;HRun=0;HaplotypeScore=106.3847;InbreedingCoeff=0.3234;MQ=65.82;MQ0=3;MQRankSum=-1.215;QD=14.77;ReadPosRankSum=9.394;VQSLOD=5.4933;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,38:40:99:1401,106,0	0/0:7,0:7:20.92:0,21,234	0/1:28,0:12:0.07:0,0,204	0/0:21,0:11:13.08:0,13,87	0/1:33,0:33:53.59:54,0,133	1/1:0,23:22:57.19:788,57,0	1/1:0,14:14:27.09:371,27,0	0/0:30,0:30:87.07:0,87,1033	1/1:0,24:24:60.20:829,60,0	0/1:33,0:33:10.28:10,0,249	0/1:34,0:34:64.09:64,0,192	1/1:1,29:30:81.26:1117,81,0	1/1:1,23:24:39.20:694,39,0	0/1:28,0:28:27.49:27,0,109	0/0:29,0:29:87.26:0,87,1153	0/1:32,0:32:26.19:26,0,141	0/0:28,0:28:74.98:0,75,995	0/1:27,0:27:29.06:64,0,29	0/0:32,0:32:93.23:0,93,1199	0/0:37,0:37:99:0,105,1436	0/0:10,0:10:30.09:0,30,401	1/1:0,23:23:57.07:749,57,0	1/1:3,23:26:63.10:840,63,0	1/1:0,19:19:36.12:484,36,0	0/1:32,0:32:48.51:49,0,60	0/1:30,0:30:35.39:35,0,79	0/0:27,0:27:76.20:0,76,972	0/1:17,0:17:29.73:35,0,30
chr10	46093463	.	A	ATTTCT	9832.48	PASS	AB=1.000;AC=49;AF=0.875;AN=56;BaseQRankSum=1.980;DP=482;FS=16.460;HRun=0;HaplotypeScore=203.4637;InbreedingCoeff=0.6363;MQ=55.81;MQ0=16;MQRankSum=-5.414;QD=22.35;ReadPosRankSum=-0.561;VQSLOD=2.9451;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,0:11:20.02:120,20,0	1/1:6,0:9:20.83:279,21,0	0/1:19,0:11:16.21:16,0,97	0/0:10,0:5:0.32:0,0,36	1/1:24,3:29:71.59:1025,72,0	1/1:9,0:7:20.22:123,20,0	1/1:8,0:7:18.87:114,19,0	1/1:11,0:10:22.98:153,23,0	1/1:12,0:11:29.55:169,30,0	1/1:6,7:14:29.96:382,30,0	1/1:12,16:28:63.26:1049,63,0	1/1:16,0:16:35.46:252,35,0	1/1:20,0:20:48.91:298,49,0	1/1:13,5:18:33.56:580,34,0	1/1:19,0:19:45.74:588,46,0	1/1:7,9:19:27.43:475,27,0	0/0:25,0:25:62.83:0,63,749	1/1:8,2:11:21.05:387,21,0	1/1:20,0:20:39.90:484,40,0	1/1:11,1:22:45.72:673,46,0	1/1:18,0:16:42:363,42,0	1/1:17,0:17:40.02:231,40,0	1/1:14,0:13:28.93:191,29,0	0/0:4,0:4:4.19:0,4,13	1/1:14,9:24:36.58:702,37,0	1/1:22,9:31:52.99:698,53,0	1/1:21,0:19:35.20:417,35,0	1/1:3,6:9:3.01:62,3,0
chr10	46093464	.	T	TTTC	6520.74	PASS	AB=1.000;AC=49;AF=0.875;AN=56;BaseQRankSum=3.912;DP=485;FS=0.607;HRun=0;HaplotypeScore=204.8258;InbreedingCoeff=0.4184;MQ=53.93;MQ0=19;MQRankSum=-2.895;QD=14.65;ReadPosRankSum=4.842;VQSLOD=4.5498;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:12,0:11:19.19:96,19,0	1/1:9,0:9:5.70:137,6,0	0/1:19,0:10:4.06:4,0,98	0/0:10,0:5:1.24:0,1,38	1/1:29,2:30:55.73:772,56,0	1/1:9,0:7:19.46:97,19,0	1/1:8,0:7:18.16:101,18,0	1/1:11,0:10:23.48:148,23,0	1/1:12,0:11:28.99:147,29,0	1/1:10,0:10:16.70:193,17,0	1/1:26,3:28:62.12:769,62,0	1/1:17,0:16:37.85:222,38,0	1/1:20,0:20:47.29:251,47,0	1/1:17,1:18:31.27:296,31,0	1/1:20,0:19:43.47:348,43,0	1/1:18,1:19:10.45:295,10,0	0/0:30,0:26:62.94:0,63,658	1/1:12,0:11:19.92:260,20,0	1/1:22,0:21:36.63:299,37,0	1/1:23,0:21:44.56:455,45,0	1/1:18,0:16:38.90:286,39,0	1/1:17,0:17:43.58:219,44,0	1/1:13,0:12:26.99:166,27,0	1/1:4,0:4:1.24:3,1,0	0/1:27,0:26:27.55:320,0,28	0/1:33,0:32:57.31:329,0,57	1/1:22,0:19:31.38:227,31,0	1/1:10,0:10:5.88:81,6,0
chr10	46094951	.	T	TTATTTTGC	22315.07	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-6.118;DP=711;FS=1.382;HRun=0;HaplotypeScore=169.4980;InbreedingCoeff=0.9993;MQ=82.97;MQ0=0;MQRankSum=-19.156;QD=107.28;ReadPosRankSum=-0.773;VQSLOD=5.5242;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,117,3217	0/0:17,0:17:51.18:0,51,1428	0/0:27,0:27:78.24:0,78,1813	0/0:31,0:31:84.26:0,84,2135	1/1:8,16:27:69.24:2551,69,0	0/0:29,0:29:78.24:0,78,2057	0/0:17,0:17:51.16:0,51,1286	0/0:36,0:35:93.32:0,93,2376	0/0:18,0:18:54.19:0,54,1527	1/1:10,21:31:87.30:3772,87,0	1/1:7,14:25:57.19:2088,57,0	0/0:32,0:32:96.33:0,96,2665	0/0:25,0:25:66.21:0,66,1793	1/1:4,16:23:57.20:2426,57,0	0/0:40,0:39:99:0,114,3113	1/1:8,23:32:90.31:3764,90,0	0/0:34,0:34:99:0,102,2831	1/1:2,5:8:21.07:782,21,0	0/0:20,0:20:60.15:0,60,1525	0/0:23,0:23:60.19:0,60,1589	0/0:21,0:21:63.20:0,63,1698	0/0:22,0:22:66.23:0,66,1867	0/0:18,0:18:54.19:0,54,1490	0/0:25,0:25:75.26:0,75,2107	1/1:7,11:19:54.19:2048,54,0	1/1:8,22:31:90.28:3532,90,0	0/0:29,0:28:78.25:0,78,2072	1/1:1,10:12:33.11:1352,33,0
chr10	46096368	.	TA	T	2483.90	PASS	AC=18;AF=0.333;AN=54;BaseQRankSum=3.055;DP=343;FS=13.050;HRun=8;HaplotypeScore=34.6027;InbreedingCoeff=0.8541;MQ=64.98;MQ0=12;MQRankSum=2.109;QD=19.56;ReadPosRankSum=5.784;VQSLOD=1.9415;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:29.97:0,30,318	0/0:3,0:3:6.02:0,6,72	0/0:30,0:10:23.64:0,24,204	0/0:24,2:6:11.96:0,12,118	1/1:2,16:18:45.06:434,45,0	0/0:23,0:23:69.17:0,69,793	0/0:2,0:2:6.02:0,6,72	0/0:23,0:23:54.16:0,54,643	0/0:4,0:4:12.01:0,12,123	1/1:1,10:11:30.04:290,30,0	1/1:3,10:13:26.98:251,27,0	0/0:5,0:5:15.05:0,15,181	0/0:4,0:4:12.02:0,12,133	1/1:0,6:6:15.02:145,15,0	0/0:10,0:10:24.07:0,24,289	1/1:0,4:4:9.01:87,9,0	0/0:19,0:19:45.11:0,45,515	1/1:1,30:30:66.11:637,66,0	0/0:21,0:21:60.18:0,60,724	0/0:6,0:6:12.01:0,12,122	0/0:3,0:3:9.03:0,9,109	0/0:1,0:1:3:0,3,25	./.	0/0:1,0:1:2.99:0,3,24	1/1:3,24:27:54.09:521,54,0	1/1:1,9:10:27.04:261,27,0	0/0:23,0:23:60.18:0,60,722	1/1:2,5:6:6.01:58,6,0
chr10	46096735	.	CAA	C	5612.71	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=13.924;DP=615;FS=9.210;HRun=11;HaplotypeScore=81.3088;InbreedingCoeff=0.9803;MQ=70.37;MQ0=0;MQRankSum=-0.405;QD=22.63;ReadPosRankSum=1.390;VQSLOD=3.8392;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,26:28:66.16:702,66,0	0/0:6,0:7:20.56:0,21,286	0/0:23,0:23:16.88:0,17,520	0/0:8,0:8:5.49:0,5,140	0/0:35,0:36:99:0,102,1484	1/1:2,30:32:81.18:862,81,0	1/1:2,16:18:48.10:511,48,0	1/1:11,0:53:99:492,114,0	1/1:1,19:20:48.12:511,48,0	0/0:20,0:20:57.19:0,57,877	0/0:10,0:10:27.09:0,27,414	1/1:1,16:17:48.12:511,48,0	1/1:5,22:27:66.15:702,66,0	0/0:15,0:15:45.14:0,45,673	0/0:19,0:19:51.17:0,51,785	0/0:28,0:29:74.33:0,74,1079	0/0:22,0:22:48.16:0,48,739	0/0:16,0:16:39.09:0,39,569	0/0:26,0:28:50.65:0,51,728	0/0:18,0:18:48.16:0,48,735	0/0:11,0:11:27.09:0,27,416	1/1:1,13:14:36.08:383,36,0	1/1:5,12:18:38.80:395,39,0	1/1:1,19:20:51.13:543,51,0	0/0:21,0:21:57.17:0,57,836	0/0:33,0:33:93.30:0,93,1404	0/0:35,0:35:98.48:0,98,1418	0/0:11,0:11:30.10:0,30,462
chr10	46099313	.	C	CT	3135.04	PASS	AB=0.782;AC=19;AF=0.339;AN=56;BaseQRankSum=-0.271;DP=547;FS=3.106;HRun=10;HaplotypeScore=90.2066;InbreedingCoeff=0.6783;MQ=72.21;MQ0=4;MQRankSum=-3.614;QD=14.58;ReadPosRankSum=-0.539;VQSLOD=3.8845;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:49:99:0,110,884	0/0:3,0:4:11.18:0,11,69	0/1:45,0:17:28.63:29,0,44	0/0:44,0:21:1.42:0,1,59	1/1:11,9:20:14.62:343,15,0	0/0:19,1:20:15.60:0,16,308	0/0:25,0:25:50.95:0,51,411	1/1:5,15:21:47.80:459,48,0	0/0:17,0:17:38.87:0,39,310	0/1:11,8:18:14.68:257,0,15	1/1:5,10:16:7.09:360,7,0	0/0:16,0:17:26.43:0,26,204	0/0:16,0:16:28.44:0,28,217	1/1:7,3:10:26.90:254,27,0	0/0:17,0:18:34.72:0,35,260	1/1:7,8:15:9.85:343,10,0	0/0:19,0:23:52.95:0,53,421	1/1:8,14:23:20.55:395,21,0	0/0:22,0:23:55.91:0,56,440	0/0:8,0:8:20.95:0,21,171	0/0:6,0:6:8.96:0,9,70	0/0:13,0:13:20.10:0,20,215	0/0:9,0:9:11.95:0,12,98	0/0:22,0:22:38.65:0,39,317	1/1:7,8:16:5.27:245,5,0	0/1:8,10:17:8.01:361,0,8	0/0:16,0:16:35.93:0,36,293	1/1:3,9:12:27.07:287,27,0
chr10	46099327	.	T	TA	5996.70	PASS	AB=0.622;AC=47;AF=0.839;AN=56;BaseQRankSum=-1.352;DP=556;FS=0.577;HRun=11;HaplotypeScore=81.1893;InbreedingCoeff=0.6285;MQ=66.48;MQ0=5;MQRankSum=-2.325;QD=13.95;ReadPosRankSum=2.237;VQSLOD=5.2782;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,43:52:80.84:971,81,0	1/1:0,5:5:15.02:148,15,0	0/0:45,0:12:0.99:0,1,43	0/0:36,0:12:12.64:0,13,54	1/1:9,2:25:53.33:323,53,0	1/1:6,16:22:15.84:342,16,0	1/1:8,15:23:30.06:303,30,0	0/0:21,0:21:38.77:0,39,295	1/1:4,13:18:35.91:349,36,0	1/1:9,1:16:29:185,29,0	1/1:9,1:18:23.11:136,23,0	1/1:4,12:16:3.35:192,3,0	1/1:2,13:15:3.87:219,4,0	1/1:6,0:11:14.51:92,15,0	1/1:4,16:20:36.06:359,36,0	1/1:6,0:17:28.61:150,29,0	0/0:23,0:23:56.77:0,57,439	1/1:10,0:24:42.17:264,42,0	0/1:9,14:23:13.78:324,0,14	1/1:2,6:8:18:172,18,0	1/1:4,0:4:3.01:31,3,0	1/1:2,11:13:26.97:260,27,0	1/1:1,8:9:11.89:122,12,0	1/1:4,16:21:29.89:288,30,0	1/1:3,1:18:31.57:185,32,0	1/1:12,0:22:34.54:199,35,0	1/1:5,11:17:0.11:215,0,0	1/1:8,0:11:26.25:167,26,0
chr10	46100762	.	C	CCCAGGTCCTACACATGCTAGGT	54010.66	PASS	AB=0.867;AC=29;AF=0.518;AN=56;BaseQRankSum=7.905;DP=774;FS=8.081;HRun=0;HaplotypeScore=398.2933;InbreedingCoeff=0.9271;MQ=74.16;MQ0=0;MQRankSum=-18.058;QD=130.46;ReadPosRankSum=0.410;VQSLOD=3.8644;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,99,4763	1/1:13,2:15:33.11:1958,33,0	0/0:31,0:30:30.10:0,30,1232	0/0:17,0:17:21.04:0,21,554	1/1:17,5:25:27.09:2300,27,0	0/0:19,0:19:39.12:0,39,1851	0/0:35,0:35:81.27:0,81,3615	0/0:27,0:27:48.16:0,48,1958	0/0:30,0:30:57.20:0,57,2859	1/1:27,4:31:66.20:4745,66,0	1/1:12,2:14:27.09:2303,27,0	0/0:41,0:41:93.29:0,93,4546	0/0:33,0:33:72.23:0,72,3550	1/1:19,7:28:54.66:4233,55,0	1/1:31,3:39:72.25:5081,72,0	1/1:19,6:27:55.79:3911,56,0	0/0:31,0:31:75.25:0,75,3611	0/1:22,2:26:99:3067,0,130	1/1:23,3:27:66.21:3296,66,0	1/1:18,0:18:27.09:1343,27,0	1/1:34,3:42:36.08:2253,36,0	0/0:24,0:24:51.18:0,51,2723	0/0:12,0:12:24.08:0,24,1271	0/0:23,0:23:57.20:0,57,2608	1/1:29,4:34:72.20:4626,72,0	1/1:27,3:31:81.27:6363,81,0	1/1:33,4:38:81.19:5393,81,0	1/1:8,5:17:33.11:3139,33,0
chr10	46102976	.	C	CG	1095.17	PASS	AB=1.000;AC=10;AF=0.179;AN=56;BaseQRankSum=-1.455;DP=457;FS=2.558;HRun=1;HaplotypeScore=104.3753;InbreedingCoeff=0.4705;MQ=65.92;MQ0=1;MQRankSum=3.063;QD=8.17;ReadPosRankSum=2.701;VQSLOD=1.3094;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:64.51:0,65,602	0/1:8,0:8:20.53:21,0,42	0/0:21,0:11:29.73:0,30,285	0/0:24,0:13:13.16:0,13,109	0/0:14,0:14:14.61:0,15,261	0/0:10,0:10:23.95:0,24,233	0/0:11,0:11:26.95:0,27,242	1/1:4,19:23:53:716,53,0	0/0:10,0:10:29.88:0,30,283	0/0:16,0:16:42.10:0,42,472	0/0:17,0:17:48.54:0,49,532	0/0:12,0:12:36.04:0,36,391	0/0:9,0:9:25.17:0,25,245	0/0:16,0:15:45.06:0,45,510	1/1:21,0:19:41.61:143,42,0	0/0:12,0:11:33.06:0,33,365	0/0:25,0:24:51.15:0,51,633	0/0:15,0:15:35.38:0,35,381	0/1:17,0:17:47.51:69,0,48	1/1:16,0:16:8.33:112,8,0	0/1:22,0:22:57.58:58,0,102	0/0:11,0:11:25.36:0,25,223	0/0:17,0:17:42.33:0,42,311	0/0:18,0:18:38.86:0,39,357	0/0:10,0:10:3:0,3,28	0/0:22,0:22:63.12:0,63,744	0/1:27,0:27:10.71:135,0,11	0/0:7,0:7:21.05:0,21,247
chr10	46102977	.	G	GA	3469.83	PASS	AB=0.993;AC=27;AF=0.482;AN=56;BaseQRankSum=2.124;DP=576;FS=8.036;HRun=8;HaplotypeScore=169.0090;InbreedingCoeff=0.0277;MQ=60.14;MQ0=2;MQRankSum=-3.620;QD=8.48;ReadPosRankSum=-4.896;VQSLOD=-0.6518;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:35,0:35:62.06:62,0,182	1/1:2,6:8:12.04:139,12,0	0/0:20,0:11:26.98:0,27,235	0/0:23,1:13:11.44:0,11,81	0/1:17,0:18:6.92:7,0,149	0/1:21,0:21:49.92:84,0,50	0/1:16,0:16:11.87:36,0,12	0/1:23,0:23:16.44:244,0,16	0/1:17,0:16:21.24:21,0,58	0/0:19,0:19:4.63:0,5,171	0/0:22,0:22:1.11:0,1,245	0/1:18,0:17:23.98:24,0,140	0/1:17,0:16:49.75:50,0,75	0/0:22,0:21:10.40:0,10,236	1/1:2,20:20:51.15:588,51,0	0/0:14,0:13:17.97:0,18,163	0/0:27,0:26:47.89:0,48,419	0/1:22,0:21:20.34:20,0,183	1/1:6,13:19:17.77:457,18,0	1/1:4,14:18:39.07:435,39,0	1/1:6,15:21:36.11:415,36,0	0/1:16,0:16:31.47:31,0,53	0/1:23,0:23:45.28:57,0,45	0/0:19,0:19:8.69:0,9,90	1/1:12,0:12:3.11:8,3,0	0/1:34,0:33:3.68:4,0,368	1/1:7,25:32:69.17:780,69,0	0/1:16,0:16:6.27:6,0,93
chr10	46102986	.	G	GAAAAAA	7951.69	PASS	AB=0.818;AC=29;AF=0.518;AN=56;BaseQRankSum=-4.326;DP=578;FS=3.247;HRun=8;HaplotypeScore=160.1748;InbreedingCoeff=0.3567;MQ=57.50;MQ0=6;MQRankSum=-4.777;QD=22.34;ReadPosRankSum=-0.181;VQSLOD=1.1164;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:23,6:31:99:1024,0,166	0/1:6,0:6:2.88:3,0,72	0/0:25,0:11:26.77:0,27,363	0/0:25,0:12:5.89:0,6,18	1/1:22,0:24:42.38:356,42,0	0/1:17,3:21:99:402,0,248	0/1:9,2:14:99:510,0,124	0/0:30,0:30:40.59:0,41,781	0/1:10,2:14:97.85:545,0,98	1/1:22,0:22:41.99:387,42,0	1/1:19,0:21:40.82:397,41,0	0/1:11,1:13:36.20:341,0,36	0/1:14,1:15:99:201,0,141	1/1:18,0:18:29.69:287,30,0	0/0:23,0:21:54.02:0,54,786	1/1:14,0:12:16.64:159,17,0	0/0:27,0:26:48.43:0,48,667	1/1:19,0:19:29.38:321,29,0	0/0:21,0:21:58.52:0,59,604	0/0:21,0:21:34.46:0,34,554	0/0:20,0:20:50.80:0,51,527	0/1:11,3:15:99:454,0,150	1/1:13,5:20:16.90:845,17,0	0/1:13,1:20:54.24:671,0,54	1/1:3,0:16:10:100,10,0	1/1:30,0:30:64.08:609,64,0	0/0:30,0:30:76.08:0,76,854	1/1:16,0:15:28:340,28,0
chr10	46102996	.	G	GA	964.75	PASS	AB=0.880;AC=22;AF=0.393;AN=56;BaseQRankSum=3.700;DP=590;FS=2.182;HRun=16;HaplotypeScore=132.5957;InbreedingCoeff=0.2936;MQ=56.45;MQ0=7;MQRankSum=-6.106;QD=2.77;ReadPosRankSum=-2.308;VQSLOD=0.0481;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:31:25.88:26,0,28	0/0:5,0:7:9.92:0,10,54	0/1:29,0:12:3.22:3,0,14	0/0:29,0:11:7.99:0,8,40	1/1:19,3:22:10.49:147,10,0	0/0:12,0:20:13.02:0,13,50	0/0:12,0:17:15.03:0,15,47	0/1:25,6:33:22.08:137,0,22	0/0:13,0:17:8.88:0,9,32	1/1:17,4:22:12.47:110,12,0	0/1:13,3:17:0.17:86,0,0	0/1:12,0:12:7:7,0,26	0/0:11,0:12:6.60:0,7,22	1/1:16,2:17:24.45:143,24,0	0/0:22,0:20:49.50:0,50,282	0/1:6,8:12:10.25:19,0,10	0/1:12,16:28:38.90:39,0,55	1/1:17,0:16:3.48:70,3,0	0/0:21,0:22:36.30:0,36,202	0/0:21,0:22:36.87:0,37,255	0/0:19,0:19:34.56:0,35,199	0/1:9,0:13:5.71:6,0,22	0/1:17,0:20:1.24:15,0,1	0/0:19,0:22:10.32:0,10,35	1/1:12,2:14:11.65:82,12,0	0/1:33,3:35:7.34:164,0,7	0/0:30,0:31:50.93:0,51,288	1/1:13,4:16:5.65:87,6,0
chr10	46102997	.	A	AAAAG	3652.52	PASS	AB=0.994;AC=28;AF=0.500;AN=56;BaseQRankSum=3.180;DP=593;FS=16.990;HRun=0;HaplotypeScore=156.1635;InbreedingCoeff=-0.5663;MQ=56.34;MQ0=7;MQRankSum=-2.399;QD=7.16;ReadPosRankSum=-3.852;VQSLOD=0.3208;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:29,2:32:79.34:431,0,79	0/1:7,0:7:19.46:64,0,19	0/1:29,0:11:7.61:8,0,72	0/1:30,0:12:16.51:17,0,25	0/1:22,0:22:72.27:185,0,72	0/1:19,1:20:65.75:169,0,66	0/1:17,0:17:35.15:142,0,35	0/0:33,0:33:58.34:0,58,435	1/1:19,0:18:14.97:141,15,0	0/1:23,0:23:58.23:192,0,58	0/1:17,0:17:39.36:244,0,39	0/1:13,0:12:53.59:54,0,54	0/1:13,0:12:65.14:65,0,70	0/1:18,0:17:64.26:139,0,64	0/0:22,0:20:20.90:0,21,210	0/1:14,0:12:14.67:72,0,15	0/0:28,0:27:34.81:0,35,358	0/1:17,0:16:83.97:119,0,84	0/1:22,0:22:81.58:114,0,82	0/1:23,0:23:45.02:45,0,163	0/1:19,0:19:51.36:51,0,155	0/1:14,0:13:31.23:131,0,31	1/1:20,1:20:1.81:282,2,0	1/1:22,0:22:14.55:166,15,0	0/1:15,0:15:25.50:38,0,25	0/1:35,0:34:99:436,0,174	0/1:31,0:31:99:113,0,285	0/1:17,0:16:3.22:237,0,3
chr10	46104573	.	G	GA	1426.29	PASS	AB=1.000;AC=25;AF=0.463;AN=54;BaseQRankSum=4.886;DP=333;FS=17.528;HRun=0;HaplotypeScore=64.7481;InbreedingCoeff=0.3864;MQ=64.98;MQ0=9;MQRankSum=-5.232;QD=6.89;ReadPosRankSum=3.777;VQSLOD=1.7772;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,3:16:32.52:326,33,0	0/0:2,0:2:0.89:0,1,2	0/1:39,0:15:3.38:3,0,132	0/0:29,0:10:19.44:0,19,136	0/1:12,0:12:15.52:16,0,90	1/1:8,0:11:21.23:131,21,0	1/1:12,0:16:3.18:160,3,0	0/1:7,0:7:0.28:104,0,0	1/1:3,4:7:17.64:209,18,0	0/0:7,0:7:3.31:0,3,116	0/0:9,0:9:7.78:0,8,91	1/1:3,8:10:2.49:154,2,0	1/1:4,4:8:7.47:117,7,0	0/1:15,0:15:26.34:26,0,36	0/0:14,0:14:25.78:0,26,170	0/0:12,0:12:0.49:0,0,66	0/0:21,0:21:60.16:0,60,797	0/1:19,0:17:14.22:42,0,14	0/0:8,0:8:17.56:0,18,133	0/0:6,0:6:3.89:0,4,28	0/1:9,0:8:0.93:1,0,23	1/1:5,3:7:7.50:88,7,0	1/1:3,4:7:11.03:138,11,0	1/1:5,3:8:7.86:79,8,0	0/0:7,0:7:14.38:0,14,108	0/1:12,0:12:2.51:3,0,135	0/0:11,0:11:11.34:0,11,110	./.
chr10	46106228	.	C	CCT	2437.37	PASS	AB=0.667;AC=17;AF=0.304;AN=56;BaseQRankSum=2.367;DP=498;FS=1.169;HRun=0;HaplotypeScore=109.2668;InbreedingCoeff=0.8466;MQ=84.49;MQ0=17;MQRankSum=-3.734;QD=25.93;ReadPosRankSum=0.896;VQSLOD=4.8212;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:8,7:15:4.81:382,0,5	0/0:9,0:9:24.08:0,24,317	0/0:69,0:36:21.67:0,22,567	0/0:110,0:56:56.17:0,56,937	0/0:16,0:16:23.79:0,24,259	1/1:2,11:14:26.86:434,27,0	1/1:4,8:12:27.09:452,27,0	0/0:23,0:20:36.08:0,36,472	1/1:4,3:8:14.94:214,15,0	0/0:16,0:16:42.75:0,43,524	0/0:11,0:11:14.68:0,15,177	1/1:2,5:7:15.05:257,15,0	1/1:2,5:7:17.98:313,18,0	0/0:10,0:10:22.31:0,22,285	0/0:15,0:14:31.29:0,31,377	0/0:8,0:8:4.28:0,4,129	0/0:14,0:13:34.66:0,35,453	0/0:6,0:6:12.03:0,12,143	0/0:20,0:18:47.73:0,48,529	0/0:14,0:14:12.39:0,12,136	0/0:13,0:13:30.04:0,30,365	1/1:3,4:7:5.84:84,6,0	1/1:8,6:15:16.37:346,16,0	1/1:4,4:8:9.03:154,9,0	0/0:6,0:7:15.05:0,15,195	0/0:18,0:17:39.11:0,39,499	0/0:2,0:2:6.01:0,6,65	0/0:22,0:20:51.71:0,52,713
chr10	46106235	.	TCA	T	515.86	PASS	AB=0.822;AC=12;AF=0.214;AN=56;BaseQRankSum=2.678;DP=453;FS=23.057;HRun=0;HaplotypeScore=108.4821;InbreedingCoeff=0.1914;MQ=89.58;MQ0=17;MQRankSum=-1.521;QD=6.45;ReadPosRankSum=-3.841;VQSLOD=0.9345;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:11,3:13:48.75:84,0,49	0/0:8,0:8:24.02:0,24,239	0/0:62,2:34:6.56:0,7,574	0/0:113,1:58:68.97:0,69,1139	0/0:15,0:15:12.30:0,12,89	0/1:10,2:12:5.99:125,0,6	0/1:8,3:11:21.56:61,0,22	0/0:18,1:16:33.68:0,34,314	0/1:5,1:6:34.92:35,0,78	0/0:15,0:15:40.37:0,40,339	0/0:9,0:9:9.41:0,9,76	1/1:4,1:5:0.69:69,1,0	1/1:6,1:7:4.66:114,5,0	0/0:9,0:9:22.17:0,22,180	0/0:12,0:11:26.89:0,27,249	0/0:6,0:6:14.93:0,15,123	0/0:11,0:10:28.91:0,29,502	0/0:5,0:5:5.83:0,6,48	0/0:17,0:15:38.57:0,39,366	0/0:11,0:11:5.46:0,5,80	0/0:11,0:11:23.02:0,23,180	1/1:5,1:6:2.24:34,2,0	0/1:10,4:14:29.64:100,0,30	0/1:4,0:5:4.55:37,0,5	0/0:6,0:6:15:0,15,155	0/0:15,0:14:7.95:0,8,257	0/0:2,0:2:2.84:0,3,22	0/0:21,0:19:53.72:0,54,458
chr10	46106766	.	T	TCACA	2091.67	PASS	AB=1.000;AC=19;AF=0.352;AN=54;BaseQRankSum=-7.440;DP=258;FS=3.282;HRun=0;HaplotypeScore=64.7004;InbreedingCoeff=0.6405;MQ=37.96;MQ0=18;MQRankSum=1.058;QD=18.84;ReadPosRankSum=2.344;VQSLOD=3.2774;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:3.01:0,3,36	0/0:4,0:4:9.02:0,9,100	0/0:8,0:1:3.01:0,3,48	0/1:8,0:2:0.86:1,0,15	./.	0/0:10,0:10:12.03:0,12,127	0/1:12,0:10:22.76:23,0,110	0/0:3,0:3:3:0,3,28	0/0:8,0:8:12.03:0,12,134	1/1:12,0:12:29.49:390,29,0	1/1:5,0:5:12.04:174,12,0	0/1:6,0:6:5.41:5,0,58	0/0:5,0:4:5.33:0,5,61	1/1:7,0:7:14.98:178,15,0	0/0:7,0:7:15.04:0,15,161	1/1:9,0:7:12.04:195,12,0	0/0:15,0:14:30.94:0,31,380	1/1:10,0:8:15.05:221,15,0	0/0:9,0:8:18.04:0,18,191	0/0:15,0:13:30.08:0,30,336	0/0:9,0:8:19.84:0,20,187	0/0:12,0:11:16.28:0,16,160	0/0:11,0:9:9.03:0,9,109	0/0:10,0:9:8.63:0,9,94	1/1:12,0:11:24.08:366,24,0	1/1:20,0:19:7.90:288,8,0	0/0:3,0:3:9.02:0,9,100	1/1:9,0:9:24.08:438,24,0
chr10	46106918	.	T	TA	6607.71	PASS	AB=0.598;AC=42;AF=0.750;AN=56;BaseQRankSum=-3.167;DP=513;FS=5.640;HRun=12;HaplotypeScore=66.0844;InbreedingCoeff=0.7818;MQ=67.82;MQ0=1;MQRankSum=0.202;QD=16.00;ReadPosRankSum=2.848;VQSLOD=6.0917;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,28:39:43.06:712,43,0	0/0:8,0:9:16.94:0,17,115	0/0:13,0:12:12.92:0,13,96	0/0:13,0:9:14.83:0,15,103	1/1:6,9:15:8.09:230,8,0	1/1:4,9:13:5.15:212,5,0	1/1:7,10:17:7.52:188,8,0	0/0:26,0:26:47.61:0,48,347	1/1:3,18:22:30.25:429,30,0	1/1:9,8:17:27.04:263,27,0	1/1:9,11:20:7.47:178,7,0	1/1:4,12:17:19.83:327,20,0	1/1:3,15:19:41.73:370,42,0	1/1:3,21:24:14.40:299,14,0	0/0:17,0:17:26.23:0,26,182	0/1:4,16:20:1.75:309,0,2	0/0:21,0:21:53.94:0,54,382	1/1:4,16:20:30.52:293,31,0	1/1:6,10:16:11.49:252,11,0	1/1:3,15:19:38.90:364,39,0	1/1:4,20:24:25.66:389,26,0	1/1:2,6:8:15.02:146,15,0	1/1:3,10:13:21.03:204,21,0	1/1:5,20:25:23.66:387,24,0	0/1:7,9:16:3.82:128,0,4	1/1:6,20:27:53.91:506,54,0	1/1:2,11:14:35.63:318,36,0	1/1:2,5:7:11.92:103,12,0
chr10	46107497	.	GAT	G	6611.47	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=12.750;DP=415;FS=0.795;HRun=0;HaplotypeScore=76.4861;InbreedingCoeff=0.9681;MQ=76.70;MQ0=0;MQRankSum=-8.415;QD=38.89;ReadPosRankSum=2.229;VQSLOD=6.9045;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,29:29:66.22:1006,66,0	0/0:1,0:1:3.01:0,3,58	0/0:21,1:21:23.49:0,23,983	0/0:21,0:21:60.18:0,60,1095	0/0:18,0:18:51.17:0,51,957	1/1:0,18:18:54.18:825,54,0	1/1:1,28:29:83.76:1255,84,0	1/1:0,11:11:30.10:458,30,0	1/1:0,8:8:21.07:321,21,0	0/0:8,0:8:24.08:0,24,434	0/0:9,0:9:27.09:0,27,521	1/1:0,9:9:27.09:413,27,0	1/1:2,16:18:48.16:728,48,0	0/0:12,0:12:36.12:0,36,685	0/0:22,0:22:66.21:0,66,1240	0/0:19,0:18:51.16:0,51,952	0/0:16,0:16:48.16:0,48,927	0/0:18,0:18:54.18:0,54,1022	0/0:7,0:7:21.06:0,21,371	0/0:6,0:6:18.06:0,18,348	0/0:20,0:20:54.17:0,54,999	1/1:0,16:16:33.11:504,33,0	1/1:0,8:8:15.05:230,15,0	1/1:0,24:24:57.19:871,57,0	0/0:13,0:13:36.10:0,36,659	0/0:11,0:11:33.11:0,33,638	0/0:14,0:13:42.13:0,42,766	0/0:8,0:8:24.07:0,24,420
chr10	46107521	.	GGT	G	202	PASS	AB=0.949;AC=11;AF=0.196;AN=56;BaseQRankSum=-3.751;DP=357;FS=59.428;HRun=0;HaplotypeScore=92.0114;InbreedingCoeff=-0.0840;MQ=72.14;MQ0=0;MQRankSum=2.275;QD=1.71;ReadPosRankSum=1.642;VQSLOD=-0.6614;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:38.71:0,39,367	1/1:3,0:3:3.44:21,3,0	0/0:13,0:10:14.35:0,14,151	0/1:13,0:12:35.19:35,0,131	0/1:7,1:8:10.98:44,0,11	0/0:17,0:17:28.13:0,28,363	0/0:24,1:25:59.65:0,60,736	0/0:11,0:11:17.12:0,17,153	0/0:13,0:13:31.59:0,32,333	0/1:9,0:9:7.24:7,0,41	0/0:4,0:4:3.54:0,4,34	0/0:15,0:15:27.41:0,27,211	0/0:20,1:21:56.64:0,57,595	0/1:12,1:13:36.50:42,0,36	0/1:16,0:16:7.82:8,0,100	0/1:21,1:21:43.28:43,0,159	0/0:11,0:11:21.39:0,21,147	0/1:14,2:16:87.58:88,0,106	0/0:2,0:2:6.02:0,6,67	0/0:5,0:5:5.77:0,6,48	0/0:13,1:14:26.09:0,26,230	0/0:12,0:12:32.77:0,33,333	0/0:9,0:9:20.22:0,20,210	0/0:20,0:20:47.89:0,48,451	0/1:11,0:11:23.35:23,0,36	0/0:8,0:8:20.35:0,20,161	0/0:13,0:12:13.35:0,13,108	0/1:6,1:7:29.46:33,0,29
chr10	46107523	.	TGG	T	1039.12	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-6.519;DP=388;FS=0.000;HRun=13;HaplotypeScore=94.3997;InbreedingCoeff=0.8277;MQ=69.92;MQ0=0;MQRankSum=3.126;QD=10.50;ReadPosRankSum=5.158;VQSLOD=2.1627;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:26:30.48:0,30,211	0/0:6,0:6:12.63:0,13,88	0/0:14,0:9:16.82:0,17,136	0/0:12,0:11:8.63:0,9,94	1/1:3,6:10:5.73:117,6,0	0/0:21,0:21:41.56:0,42,236	0/0:26,0:27:59.60:0,60,378	0/0:9,0:11:3.46:0,3,25	0/0:16,0:16:35.49:0,35,201	1/1:3,7:10:14.84:125,15,0	1/1:3,1:4:2.99:29,3,0	0/0:15,0:16:21.13:0,21,134	0/0:22,0:23:50.57:0,51,361	1/1:5,4:13:24.86:184,25,0	0/0:17,0:17:13.64:0,14,99	1/1:8,10:20:22.96:247,23,0	0/0:14,0:17:37.47:0,37,296	1/1:9,7:17:29.72:267,30,0	0/0:2,0:3:8.94:0,9,65	0/0:5,0:5:3:0,3,26	0/0:14,0:15:12.45:0,12,99	0/0:12,0:13:22.98:0,23,167	0/0:9,0:9:22.06:0,22,135	0/0:25,0:25:39.21:0,39,222	1/1:3,5:9:18.75:143,19,0	1/1:8,0:8:0.40:1,0,0	0/0:13,0:12:17.92:0,18,139	1/1:3,4:7:12:116,12,0
chr10	46108326	.	A	AT	9628.12	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-10.385;DP=701;FS=1.297;HRun=1;HaplotypeScore=63.7479;InbreedingCoeff=0.9844;MQ=75.95;MQ0=0;MQRankSum=-2.384;QD=41.50;ReadPosRankSum=2.241;VQSLOD=5.4202;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,102,1307	0/0:10,0:10:30.10:0,30,389	0/0:14,0:14:33.11:0,33,429	0/0:20,0:20:57.17:0,57,712	1/1:0,27:27:78.26:1158,78,0	0/0:29,0:29:87.28:0,87,1126	0/0:29,0:29:81.23:0,81,1021	0/0:27,0:27:75.24:0,75,974	0/0:24,0:24:69.22:0,69,893	1/1:0,25:25:75.25:1100,75,0	1/1:0,18:18:54.18:809,54,0	0/0:15,0:15:45.13:0,45,570	0/0:24,0:24:69.21:0,69,880	1/1:0,31:31:84.28:1231,84,0	0/0:27,0:27:75.24:0,75,974	1/1:2,28:30:6.36:1082,6,0	0/0:25,0:25:72.23:0,72,934	1/1:0,18:18:51.17:764,51,0	0/0:20,0:20:60.19:0,60,775	0/0:22,0:22:66.21:0,66,857	0/0:36,0:36:99:0,108,1402	0/0:27,0:27:78.25:0,78,1006	0/0:23,0:23:69.22:0,69,895	0/0:29,0:29:87.26:0,87,1111	1/1:0,23:23:69.23:1033,69,0	1/1:0,31:31:93.30:1372,93,0	0/0:33,0:33:93.30:0,93,1195	1/1:0,29:29:72.24:1079,72,0
chr10	46112199	.	GATT	G	1533.53	PASS	AB=0.875;AC=17;AF=0.315;AN=54;BaseQRankSum=0.748;DP=362;FS=5.034;HRun=0;HaplotypeScore=49.4116;InbreedingCoeff=0.7222;MQ=76.96;MQ0=7;MQRankSum=0.125;QD=15.65;ReadPosRankSum=1.359;VQSLOD=2.7247;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:23,2:25:65.26:982,65,0	0/0:6,0:6:15.02:0,15,234	0/0:28,0:12:35.27:0,35,490	0/0:21,0:14:5.38:0,5,289	0/0:13,0:14:30.57:0,31,478	1/1:0,6:6:3.01:38,3,0	1/1:0,10:10:3.01:37,3,0	0/1:12,2:13:24.65:209,0,25	1/1:0,5:5:3.01:38,3,0	0/0:16,0:15:31.29:0,31,478	0/0:10,0:10:21.07:0,21,328	1/1:1,11:12:9.01:93,9,0	1/1:0,12:12:2.80:35,3,0	0/0:11,0:11:18.05:0,18,293	0/0:9,0:9:17.95:0,18,244	0/0:11,0:11:30.08:0,30,447	0/0:25,0:25:53:0,53,980	0/0:20,0:20:44.79:0,45,706	0/0:20,0:19:49.47:0,49,847	0/0:5,0:5:12.12:0,12,132	0/0:10,0:9:13.67:0,14,116	1/1:0,5:5:5.93:54,6,0	1/1:8,1:8:15.05:222,15,0	./.	0/0:15,0:15:33.13:0,33,437	0/0:12,0:12:26.42:0,26,446	0/0:9,0:9:23.98:0,24,326	0/0:11,0:10:21.03:0,21,265
chr10	46112329	.	G	GT	5199.12	PASS	AB=1.000;AC=26;AF=0.464;AN=56;BaseQRankSum=9.135;DP=409;FS=15.608;HRun=0;HaplotypeScore=64.5786;InbreedingCoeff=0.7346;MQ=85.92;MQ0=0;MQRankSum=-7.857;QD=22.80;ReadPosRankSum=0.608;VQSLOD=4.4080;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,28:28:69.23:948,69,0	0/0:3,0:3:2.44:0,2,6	0/0:14,0:14:39.13:0,39,530	0/0:20,0:20:40.20:0,40,568	0/0:14,0:14:42.12:0,42,569	1/1:1,17:18:39.13:539,39,0	1/1:0,27:26:60.20:829,60,0	0/1:17,0:17:20.94:21,0,22	1/1:0,6:6:15.05:207,15,0	0/0:17,0:17:51.17:0,51,711	0/0:9,0:9:27.09:0,27,377	1/1:0,14:14:36.12:499,36,0	1/1:1,14:16:45.11:608,45,0	0/0:13,0:13:39.13:0,39,543	0/1:16,0:16:7.51:19,0,8	0/0:10,0:10:30.10:0,30,419	0/0:29,0:28:75.22:0,75,1028	0/0:22,0:22:63.21:0,63,874	1/1:11,0:11:12.98:59,13,0	0/1:6,0:6:0.61:7,0,1	0/1:19,0:19:18.90:19,0,23	1/1:0,11:11:33.11:455,33,0	1/1:0,11:11:27.09:372,27,0	1/1:2,13:16:39.09:512,39,0	0/0:10,0:10:30.10:0,30,419	0/0:13,0:13:39.13:0,39,544	1/1:12,0:12:19.22:106,19,0	0/0:7,0:7:18.01:0,18,224
chr10	46112330	.	C	CG	8128.69	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=5.266;DP=416;FS=11.522;HRun=2;HaplotypeScore=55.0730;InbreedingCoeff=0.9781;MQ=85.94;MQ0=0;MQRankSum=-6.350;QD=34.74;ReadPosRankSum=0.929;VQSLOD=4.2459;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:30:69.23:967,69,0	1/1:0,3:3:6.02:86,6,0	0/0:14,0:14:39.12:0,39,479	0/0:22,0:22:30.37:0,30,516	0/0:14,0:14:42.13:0,42,519	1/1:18,0:18:39.13:547,39,0	1/1:26,0:25:60.20:842,60,0	1/1:1,15:17:45.13:609,45,0	1/1:6,0:6:15.05:210,15,0	0/0:17,0:17:51.16:0,51,632	0/0:9,0:9:27.08:0,27,335	1/1:14,0:14:36.12:497,36,0	1/1:16,0:16:42.14:577,42,0	0/0:14,0:14:36.11:0,36,446	1/1:0,16:16:39.13:558,39,0	0/0:10,0:10:30.09:0,30,372	0/0:28,0:27:72.23:0,72,890	0/0:22,0:22:60.16:0,60,728	1/1:0,11:11:33.09:454,33,0	1/1:0,6:6:15.05:216,15,0	1/1:0,19:19:51.17:731,51,0	1/1:11,0:11:33.11:462,33,0	1/1:11,0:11:27.09:379,27,0	1/1:16,0:16:39.06:522,39,0	0/0:10,0:10:30.09:0,30,372	0/0:13,0:13:39.12:0,39,483	1/1:2,12:14:33.11:472,33,0	0/0:9,0:9:15.05:0,15,185
chr10	46112491	.	G	GTGTGTA	2617.37	PASS	AB=0.881;AC=19;AF=0.339;AN=56;BaseQRankSum=0.108;DP=454;FS=0.000;HRun=0;HaplotypeScore=147.9155;InbreedingCoeff=0.3352;MQ=41.87;MQ0=24;MQRankSum=-5.430;QD=14.00;ReadPosRankSum=-1.086;VQSLOD=2.8580;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:22,3:23:2.03:24,2,0	0/1:2,0:2:0:0,0,0	0/0:20,0:4:6:0,6,86	0/0:36,0:2:0.89:0,1,2	0/0:6,0:6:9.03:0,9,185	1/1:16,3:18:8.84:138,9,0	0/1:10,14:24:27.85:299,0,28	0/0:30,0:27:10.64:0,11,405	0/1:14,7:21:32.85:564,0,33	0/0:16,0:15:39.01:0,39,729	0/0:10,0:9:24.08:0,24,537	0/1:13,5:18:23.96:541,0,24	1/1:12,7:18:25.17:828,25,0	0/0:15,0:15:23.58:0,24,381	0/0:21,0:21:40.15:0,40,469	0/0:17,0:17:48.06:0,48,773	0/0:26,0:25:71.87:0,72,1258	0/0:21,0:21:41.96:0,42,666	0/1:11,0:10:10.51:11,0,63	0/1:2,0:2:0:0,0,0	0/0:11,0:11:7.72:0,8,44	1/1:3,1:4:2.84:14,3,0	1/1:1,4:5:3.01:104,3,0	1/1:20,5:24:2.06:242,2,0	0/0:6,0:5:12.04:0,12,267	0/0:29,0:28:81.26:0,81,1201	0/1:12,0:10:11.12:11,0,28	0/0:2,0:2:2.55:0,3,24
chr10	46112493	.	G	GTGTA	1454.99	PASS	AB=0.981;AC=15;AF=0.268;AN=56;BaseQRankSum=5.057;DP=452;FS=0.657;HRun=0;HaplotypeScore=135.9440;InbreedingCoeff=0.2508;MQ=42.02;MQ0=23;MQRankSum=-5.063;QD=8.27;ReadPosRankSum=0.811;VQSLOD=2.6833;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:28,1:26:2.80:24,3,0	0/0:2,0:2:0:0,0,0	0/0:19,0:4:6:0,6,76	0/0:37,0:3:3.48:0,3,39	0/0:6,0:6:9.03:0,9,150	0/1:19,0:18:8.01:62,0,8	0/1:20,1:21:16.59:163,0,17	0/0:28,0:26:26.01:0,26,416	0/1:21,0:21:32.85:332,0,33	0/0:16,0:15:39.06:0,39,611	0/0:11,0:10:24.08:0,24,436	0/1:17,0:18:23.49:311,0,23	1/1:18,1:18:16.94:488,17,0	0/0:13,0:13:23.68:0,24,319	0/0:21,0:21:33.05:0,33,368	0/0:17,0:17:48.06:0,48,660	0/0:26,0:25:71.96:0,72,1045	0/0:20,0:20:41.95:0,42,565	0/0:12,0:11:15.67:0,16,114	0/1:2,0:2:0:0,0,0	0/0:11,0:11:9.34:0,9,62	1/1:3,1:4:2.84:14,3,0	1/1:5,0:5:3.01:58,3,0	0/1:25,1:25:31.56:146,0,32	0/0:6,0:5:12.04:0,12,217	0/0:28,0:28:83.54:0,84,1063	0/1:12,0:10:9.63:10,0,28	0/0:2,0:2:2.92:0,3,24
chr10	46112515	.	GTGTGCA	G	1751.84	PASS	AB=0.997;AC=17;AF=0.327;AN=52;BaseQRankSum=-1.401;DP=440;FS=8.298;HRun=0;HaplotypeScore=154.6544;InbreedingCoeff=-0.1010;MQ=56.03;MQ0=21;MQRankSum=-0.263;QD=7.24;ReadPosRankSum=-4.321;VQSLOD=-0.2686;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:29:4.02:0,4,24	0/1:3,0:3:0:0,0,0	0/0:25,0:8:23.97:0,24,353	0/0:44,0:16:24.16:0,24,619	0/1:8,0:8:7.47:7,0,49	0/1:16,0:16:1.55:2,0,14	0/1:13,0:13:17.75:18,0,102	1/1:7,23:27:58.37:1238,58,0	0/0:20,0:20:16.74:0,17,137	0/1:15,0:14:70.12:70,0,292	0/0:12,0:11:21.93:0,22,292	0/1:16,0:16:62.40:62,0,150	0/1:20,0:20:39.98:40,0,226	0/0:12,0:12:1.47:0,1,155	0/1:25,0:25:8.97:9,0,314	0/0:13,0:13:33.07:0,33,393	0/0:28,0:28:81.17:0,81,2140	0/1:17,0:17:2.02:2,0,457	0/1:13,0:12:42.89:157,0,43	./.	1/1:11,0:11:6.30:77,6,0	0/0:4,0:4:4.98:0,5,24	0/0:3,0:3:3.01:0,3,31	0/1:26,0:25:15.77:16,0,47	0/0:5,0:5:12.02:0,12,117	0/1:20,1:21:99:165,0,488	0/1:8,0:7:9.78:34,0,10	./.
chr10	46112517	.	GTGCA	G	2087.72	PASS	AB=0.940;AC=24;AF=0.462;AN=52;BaseQRankSum=3.093;DP=427;FS=12.164;HRun=0;HaplotypeScore=142.7572;InbreedingCoeff=0.0772;MQ=56.57;MQ0=19;MQRankSum=-4.156;QD=7.82;ReadPosRankSum=-1.098;VQSLOD=2.2421;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:14,17:29:4.37:0,4,23	0/1:3,0:3:0:0,0,0	0/0:25,0:8:24.08:0,24,380	0/0:43,0:16:24.16:0,24,600	0/1:7,1:8:0.13:57,0,0	1/1:14,2:16:8.63:85,9,0	0/1:10,2:12:8.18:71,0,8	1/1:28,0:26:69.30:876,69,0	0/1:12,8:20:12.65:86,0,13	0/1:14,0:14:49.42:87,0,49	0/0:12,0:11:10.83:0,11,105	0/1:16,0:16:26:116,0,26	0/1:20,0:20:4.82:107,0,5	0/1:11,1:12:45.69:53,0,46	0/1:25,0:25:18.69:19,0,74	0/0:13,0:13:12.98:0,13,71	0/0:26,0:26:77.12:0,77,1636	0/1:17,0:17:17.24:17,0,150	1/1:11,0:11:2.06:193,2,0	./.	1/1:10,0:10:14.89:144,15,0	0/0:4,0:4:4.98:0,5,24	1/1:3,0:3:2.90:16,3,0	0/1:22,3:25:3.45:102,0,3	0/0:5,0:5:4.98:0,5,12	0/1:19,0:19:91.68:161,0,92	1/1:8,0:7:6.84:55,7,0	./.
chr10	46112519	.	GCA	G	4637.97	PASS	AB=0.745;AC=39;AF=0.750;AN=52;BaseQRankSum=0.833;DP=382;FS=2.201;HRun=0;HaplotypeScore=112.8872;InbreedingCoeff=0.6439;MQ=59.26;MQ0=18;MQRankSum=-3.319;QD=17.91;ReadPosRankSum=5.327;VQSLOD=5.1200;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:24:5.70:0,6,19	0/1:1,2:3:0:0,0,0	0/0:26,0:9:27.09:0,27,435	0/0:41,0:16:21.15:0,21,564	1/1:1,7:8:9.02:114,9,0	1/1:7,2:9:8.40:49,8,0	1/1:10,2:12:8.94:72,9,0	1/1:28,0:26:63.18:818,63,0	0/1:16,0:16:2.20:68,0,2	1/1:1,13:14:36.12:496,36,0	1/1:3,9:11:18.06:258,18,0	0/1:6,8:14:4.30:121,0,4	1/1:8,8:16:29.50:193,29,0	1/1:2,9:11:11.61:157,12,0	1/1:16,7:23:30.07:250,30,0	1/1:1,10:11:24.08:344,24,0	0/0:25,0:25:74.22:0,74,1088	1/1:4,11:15:20.10:259,20,0	1/1:3,7:10:21.02:250,21,0	./.	1/1:7,0:7:15.04:193,15,0	0/0:3,1:4:4.65:0,5,18	1/1:3,0:3:2.60:10,3,0	1/1:12,6:18:2.33:89,2,0	1/1:0,4:4:12.04:172,12,0	1/1:3,15:18:48.15:646,48,0	1/1:7,0:6:8.97:80,9,0	./.
chr10	46113596	.	CCACACACACACA	C	532.55	PASS	AB=0.892;AC=12;AF=0.353;AN=34;BaseQRankSum=3.700;DP=537;FS=19.382;HRun=0;HaplotypeScore=165.9859;InbreedingCoeff=0.4487;MQ=74.44;MQ0=18;MQRankSum=-3.867;QD=4.51;ReadPosRankSum=-0.263;VQSLOD=1.2767;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	0/0:12,0:12:3.01:0,3,121	0/0:17,0:17:3.01:0,3,70	0/0:18,0:17:6.02:0,6,153	./.	1/1:18,0:18:3.01:102,3,0	0/0:15,0:14:19.62:0,20,598	./.	0/1:16,0:16:39.05:76,0,39	1/1:8,1:10:6.02:185,6,0	0/0:15,0:17:18.06:0,18,651	./.	0/0:12,0:13:12.04:0,12,547	0/0:25,0:28:39.13:0,39,1009	0/0:32,0:30:30.10:0,30,972	./.	1/1:17,0:23:2.81:83,3,0	./.	1/1:13,1:14:3.01:102,3,0	1/1:7,2:9:3.01:102,3,0	0/1:21,5:26:0.30:0,0,0	0/0:15,0:15:6.02:0,6,187	0/0:20,0:18:6.02:0,6,192	./.	./.
chr10	46115651	.	C	CT	655.24	PASS	AB=0.821;AC=5;AF=0.104;AN=48;BaseQRankSum=-1.984;DP=384;FS=9.566;HRun=1;HaplotypeScore=35.0752;InbreedingCoeff=0.0869;MQ=34.94;MQ0=118;MQRankSum=-2.465;QD=10.40;ReadPosRankSum=-2.346;VQSLOD=-0.2351;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:11:9.03:0,9,116	./.	./.	./.	0/0:9,0:5:6.02:0,6,78	0/1:9,2:7:65.56:77,0,66	0/0:19,0:4:12.04:0,12,155	1/1:18,15:15:6.68:591,7,0	0/0:10,0:5:9.03:0,9,116	0/0:13,0:7:21.05:0,21,258	0/0:10,0:5:9.03:0,9,117	0/0:7,0:3:7.84:0,8,83	0/0:8,0:5:2.67:0,3,38	0/0:16,0:14:18.02:0,18,234	0/1:4,2:3:32.93:38,0,33	0/0:23,0:21:39.12:0,39,504	0/0:8,0:6:9.03:0,9,117	0/0:19,0:13:27.04:0,27,331	0/0:6,0:3:9.03:0,9,117	0/0:6,0:5:12.04:0,12,156	0/0:20,0:13:18.06:0,18,233	0/0:14,0:9:3.01:0,3,39	0/0:14,0:6:2.98:0,3,39	0/0:11,0:7:6.02:0,6,78	0/0:10,0:9:6.02:0,6,78	0/0:23,0:11:30.10:0,30,389	0/1:11,2:12:59.46:59,0,281	./.
chr10	46115714	.	GGTC	G	220.14	PASS	AB=0.862;AC=5;AF=0.096;AN=52;BaseQRankSum=4.098;DP=297;FS=2.988;HRun=0;HaplotypeScore=59.4231;InbreedingCoeff=0.1789;MQ=48.86;MQ0=22;MQRankSum=-3.548;QD=4.79;ReadPosRankSum=-1.496;VQSLOD=1.3937;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:16,2:15:18.82:19,0,125	0/0:6,0:5:14.62:0,15,86	./.	0/0:8,0:3:5.11:0,5,26	0/0:11,0:7:14.64:0,15,86	0/0:15,2:13:17.53:0,18,101	0/0:15,0:13:11.70:0,12,69	0/0:11,2:9:20.52:0,21,124	0/0:7,4:3:8.77:0,9,51	0/0:4,0:4:11.70:0,12,69	0/0:6,0:4:5.85:0,6,34	0/0:11,2:6:17.55:0,18,103	0/1:12,0:10:10.12:10,0,54	0/0:6,0:6:11.70:0,12,69	0/0:12,0:10:23.40:0,23,137	0/0:13,0:10:17.55:0,18,103	0/0:7,0:7:8.77:0,9,52	0/0:7,0:6:2.81:0,3,17	0/0:4,0:4:11.70:0,12,69	0/0:6,0:3:5.85:0,6,34	0/0:33,0:26:36.52:0,37,275	0/1:6,5:9:19.50:121,0,19	1/1:1,4:5:12.04:184,12,0	0/0:14,0:12:17.53:0,18,102	0/0:8,0:5:5.85:0,6,34	0/0:12,0:11:32.34:0,32,238	0/0:10,0:9:12.02:0,12,135	./.
chr10	46115721	.	C	CT	148.43	PASS	AB=0.803;AC=4;AF=0.074;AN=54;BaseQRankSum=4.614;DP=359;FS=1.431;HRun=0;HaplotypeScore=62.2621;InbreedingCoeff=0.2663;MQ=45.20;MQ0=43;MQRankSum=-3.078;QD=4.12;ReadPosRankSum=-0.838;VQSLOD=3.1564;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:16,2:16:7.94:8,0,350	0/0:6,0:5:15.05:0,15,210	./.	0/0:13,0:2:0.89:0,1,32	0/0:13,0:8:15.05:0,15,209	0/0:21,2:17:23.78:0,24,264	0/0:26,0:24:38.94:0,39,431	0/0:14,2:9:21.07:0,21,293	0/0:9,4:4:12:0,12,145	0/0:7,0:5:15.04:0,15,195	0/0:7,0:5:6.02:0,6,84	0/0:12,2:6:18.06:0,18,250	0/0:12,0:8:11.70:0,12,167	0/0:8,0:6:12.04:0,12,167	0/0:12,0:10:24.08:0,24,334	0/0:16,0:13:24.07:0,24,320	0/0:9,0:8:12.04:0,12,164	0/0:10,0:8:5.97:0,6,61	0/0:7,0:4:12.04:0,12,168	0/0:5,0:2:6.02:0,6,84	0/0:40,0:33:60.28:0,60,754	0/1:7,5:10:84.29:93,0,84	1/1:2,4:6:12.04:152,12,0	0/0:11,0:10:15.05:0,15,209	0/0:8,0:5:9.90:0,10,110	0/0:14,0:12:36.10:0,36,485	0/0:11,0:9:25.64:0,26,339	0/0:5,0:4:8.99:0,9,75
chr10	46115738	.	CT	C	289.70	PASS	AB=0.781;AC=4;AF=0.077;AN=52;BaseQRankSum=5.510;DP=460;FS=0.000;HRun=1;HaplotypeScore=62.3205;InbreedingCoeff=0.3514;MQ=41.49;MQ0=75;MQRankSum=-4.735;QD=7.43;ReadPosRankSum=-2.176;VQSLOD=-0.1901;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:18,3:19:41.27:41,0,531	0/0:6,0:5:15.05:0,15,239	./.	./.	0/0:17,0:9:21.07:0,21,335	0/0:20,3:15:27.04:0,27,401	0/0:27,0:25:42.14:0,42,661	0/0:30,1:17:51.10:0,51,711	0/0:5,7:3:9.03:0,9,144	0/0:11,0:9:27.08:0,27,407	0/0:9,0:7:9.03:0,9,144	0/0:7,8:6:18.06:0,18,287	0/0:8,5:8:12.04:0,12,192	0/0:15,0:12:27.09:0,27,431	0/0:15,0:12:30.10:0,30,468	0/0:19,0:16:36.12:0,36,575	0/0:17,0:14:30.10:0,30,473	0/0:12,0:10:8.88:0,9,144	0/0:11,0:6:18.06:0,18,287	0/0:7,0:4:9.03:0,9,144	0/0:44,0:36:68.80:0,69,1087	0/1:6,5:9:80.51:110,0,81	1/1:1,6:7:18.06:251,18,0	0/0:10,0:9:15.05:0,15,239	0/0:9,0:6:10.85:0,11,148	0/0:16,0:12:36.11:0,36,547	0/0:12,0:9:24:0,24,327	0/0:4,0:3:9.03:0,9,144
chr10	46115816	.	C	CT	2454.62	PASS	AB=0.709;AC=20;AF=0.357;AN=56;BaseQRankSum=5.344;DP=379;FS=4.324;HRun=1;HaplotypeScore=70.8784;InbreedingCoeff=0.0151;MQ=52.56;MQ0=42;MQRankSum=-10.402;QD=14.35;ReadPosRankSum=-2.736;VQSLOD=2.1532;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,11:12:23.97:285,24,0	0/1:1,1:2:32.81:39,0,33	0/0:12,0:3:8.91:0,9,71	0/0:22,0:6:13.77:0,14,130	0/0:12,0:8:18.06:0,18,234	0/1:12,4:13:99:172,0,129	0/1:7,2:7:52.08:52,0,138	0/1:14,1:11:64.34:64,0,160	1/1:2,7:6:15.05:224,15,0	0/0:15,0:11:33.10:0,33,417	0/0:17,0:16:42.13:0,42,532	1/1:1,6:5:15.05:224,15,0	0/1:3,7:7:17.79:247,0,18	0/0:24,0:22:57.13:0,57,720	0/1:5,9:13:99:296,0,120	0/0:30,0:30:72.18:0,72,920	0/0:19,0:18:39.13:0,39,506	0/0:26,0:24:60.16:0,60,748	0/1:6,3:4:26.92:122,0,27	0/1:3,3:6:98.70:115,0,99	0/1:12,5:15:75.90:76,0,278	1/1:0,2:1:3.01:44,3,0	0/1:3,6:9:16.41:246,0,16	0/1:2,4:6:25.24:120,0,25	0/0:11,0:10:21.07:0,21,273	0/0:16,0:10:27.09:0,27,350	0/1:11,8:18:99:307,0,298	0/0:3,0:3:9.03:0,9,117
chr10	46115834	.	TC	T	5535.16	PASS	AB=0.914;AC=54;AF=0.964;AN=56;BaseQRankSum=-0.268;DP=392;FS=4.610;HRun=1;HaplotypeScore=80.0941;InbreedingCoeff=-0.0284;MQ=61.56;MQ0=11;MQRankSum=-2.206;QD=14.12;ReadPosRankSum=2.983;VQSLOD=4.4532;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:19:41.37:283,41,0	1/1:4,0:4:8.91:65,9,0	0/1:9,0:6:11.12:42,0,11	0/1:19,5:18:6.13:149,0,6	1/1:13,2:12:26.44:161,26,0	1/1:13,0:12:32.56:226,33,0	1/1:9,0:7:20.58:134,21,0	1/1:12,0:10:28.71:157,29,0	1/1:10,0:8:23.69:170,24,0	1/1:12,0:12:32.88:156,33,0	1/1:20,0:20:49.76:298,50,0	1/1:8,0:7:20.79:153,21,0	1/1:10,0:9:26.92:213,27,0	1/1:18,0:18:49.80:300,50,0	1/1:16,0:15:41.50:292,41,0	1/1:26,1:27:33.56:293,34,0	1/1:18,0:17:37.99:225,38,0	1/1:28,3:29:67.23:420,67,0	1/1:7,0:7:20.59:135,21,0	1/1:7,0:7:20.83:164,21,0	1/1:23,0:21:20.60:258,21,0	1/1:7,0:6:14.83:106,15,0	1/1:10,0:10:29.85:232,30,0	1/1:8,0:8:17.75:123,18,0	1/1:12,0:11:26.32:153,26,0	1/1:12,2:11:31.76:197,32,0	1/1:23,0:23:59.25:416,59,0	1/1:1,0:1:2.90:16,3,0
chr10	46115997	.	GAA	G	4430.10	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=-1.165;DP=529;FS=2.850;HRun=13;HaplotypeScore=87.2923;InbreedingCoeff=0.9576;MQ=73.58;MQ0=1;MQRankSum=-2.981;QD=14.48;ReadPosRankSum=2.408;VQSLOD=4.2131;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,35:41:58.59:629,59,0	1/1:2,0:13:24.69:107,25,0	0/0:24,0:21:20:0,20,258	0/0:16,0:13:22.17:0,22,274	0/0:3,0:18:34.30:0,34,131	1/1:1,15:16:39.06:377,39,0	1/1:4,8:12:18.01:175,18,0	1/1:7,14:21:38.94:369,39,0	1/1:2,12:15:23.87:281,24,0	0/0:4,0:11:22.24:0,22,141	0/0:7,0:11:18.49:0,18,128	1/1:3,22:26:56.70:535,57,0	1/1:5,12:18:29.96:341,30,0	0/0:9,0:28:48.43:0,48,215	1/1:3,0:24:35.08:164,35,0	0/0:3,1:20:3.85:0,4,74	0/0:22,0:25:73.17:0,73,925	0/0:3,1:27:19.30:0,19,126	1/1:6,0:15:19.88:80,20,0	1/1:1,0:14:19.80:112,20,0	1/1:3,1:23:41.05:191,41,0	1/1:1,8:9:15.01:144,15,0	1/1:1,10:11:23.89:233,24,0	1/1:2,23:27:50.74:527,51,0	0/0:3,0:13:20.99:0,21,138	0/0:7,0:21:36.70:0,37,170	1/1:3,0:19:38.40:166,38,0	0/0:5,0:8:7.49:0,7,26
chr10	46119818	.	TGCCAGCAGTCTG	T	8805.09	PASS	AB=0.533;AC=11;AF=0.196;AN=56;BaseQRankSum=14.246;DP=727;FS=4.504;HRun=0;HaplotypeScore=246.5000;InbreedingCoeff=0.8862;MQ=78.91;MQ0=0;MQRankSum=-13.126;QD=63.81;ReadPosRankSum=-0.456;VQSLOD=4.4154;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,138,8125	1/1:0,13:13:36.12:1368,36,0	0/0:16,0:16:33.11:0,33,1606	0/0:23,0:23:60.61:0,61,2896	0/0:22,0:22:63.22:0,63,3689	0/0:19,0:19:54.19:0,54,3226	0/0:23,0:23:63.22:0,63,3763	0/0:29,0:29:78.27:0,78,4292	0/0:24,0:24:69.23:0,69,4105	0/0:24,0:24:72.25:0,72,4122	0/0:13,0:13:39.12:0,39,2176	0/0:31,0:31:93.32:0,93,5586	0/0:22,0:22:63.22:0,63,3722	0/0:39,0:39:99:0,117,6875	0/1:4,28:32:99:2380,0,117	0/0:27,0:27:81.28:0,81,4939	0/0:45,0:45:99:0,132,7527	0/0:32,0:32:90.31:0,90,5439	1/1:7,9:16:27.09:734,27,0	1/1:3,15:18:36.06:1272,36,0	1/1:10,24:34:33.07:982,33,0	0/0:31,0:31:93.32:0,93,5696	0/0:25,0:25:75.24:0,75,4250	0/0:29,0:29:84.29:0,84,4961	0/0:29,0:29:87.30:0,87,5205	0/0:29,0:29:87.28:0,87,4912	1/1:2,23:25:57.15:2069,57,0	0/0:9,0:9:27.09:0,27,1675
chr10	46122328	.	AAAAT	A	7590.28	PASS	AC=50;AF=0.926;AN=54;BaseQRankSum=6.378;DP=417;FS=18.533;HRun=0;HaplotypeScore=89.0215;InbreedingCoeff=0.6616;MQ=66.56;MQ0=0;MQRankSum=-1.948;QD=20.03;ReadPosRankSum=0.004;VQSLOD=2.7758;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:12,0:27:33.04:307,33,0	1/1:4,3:7:6.02:97,6,0	./.	0/0:5,0:4:0:0,0,0	1/1:5,11:16:30.06:455,30,0	1/1:4,0:13:27.03:252,27,0	1/1:11,0:18:15.02:140,15,0	1/1:12,0:19:16.26:143,16,0	1/1:6,0:15:21.02:193,21,0	1/1:5,10:15:30.10:468,30,0	1/1:3,6:9:15.01:213,15,0	1/1:8,0:21:29.07:258,29,0	1/1:3,0:18:36.04:335,36,0	1/1:10,3:13:9.03:145,9,0	1/1:4,9:13:21.07:338,21,0	1/1:8,9:17:24.08:373,24,0	0/0:25,0:26:57.20:0,57,1342	1/1:9,15:24:36.12:580,36,0	1/1:12,3:15:6.02:95,6,0	1/1:1,9:10:27.06:407,27,0	1/1:3,9:12:21.07:338,21,0	1/1:6,0:11:9.01:83,9,0	1/1:3,0:8:15.02:140,15,0	1/1:6,0:12:9.01:84,9,0	1/1:2,11:13:27.09:435,27,0	1/1:9,11:20:33.10:508,33,0	1/1:2,12:14:36.12:577,36,0	1/1:6,13:19:39.13:628,39,0
chr10	46122617	.	CA	C	3578.26	PASS	AB=0.863;AC=33;AF=0.589;AN=56;BaseQRankSum=-2.694;DP=524;FS=1.471;HRun=13;HaplotypeScore=79.7085;InbreedingCoeff=0.4146;MQ=62.20;MQ0=2;MQRankSum=2.441;QD=9.42;ReadPosRankSum=3.246;VQSLOD=3.3059;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:22:10.30:10,0,34	1/1:0,4:5:13.97:93,14,0	0/0:27,0:17:20.15:0,20,147	0/0:17,0:10:6.47:0,6,77	1/1:3,13:16:40.80:290,41,0	0/1:13,0:13:1.41:1,0,33	0/0:9,0:9:6.31:0,6,23	0/0:33,0:33:16.08:0,16,149	0/1:16,0:15:5.15:5,0,14	1/1:13,20:33:3.61:352,4,0	1/1:3,9:14:30.88:206,31,0	0/1:18,0:17:5.37:5,0,56	0/0:9,0:9:5.43:0,5,49	1/1:10,6:16:26.61:196,27,0	1/1:5,18:26:28.89:339,29,0	1/1:6,18:25:13.15:257,13,0	0/0:43,1:45:59.76:0,60,1000	0/1:6,11:17:46.69:183,0,47	0/1:6,11:16:1.85:196,0,2	1/1:3,5:7:19.91:134,20,0	1/1:3,10:14:30.92:209,31,0	0/0:2,0:3:4.74:0,5,16	0/1:12,0:12:0.47:0,0,18	0/1:12,0:12:1.45:1,0,14	1/1:7,15:22:29.79:219,30,0	1/1:9,21:31:38.42:435,38,0	1/1:11,14:24:15.14:245,15,0	0/1:3,14:17:45.74:199,0,46
chr10	46122628	.	AAAG	A	2891.25	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=-2.562;DP=577;FS=0.000;HRun=0;HaplotypeScore=103.8743;InbreedingCoeff=0.8608;MQ=59.11;MQ0=2;MQRankSum=-2.662;QD=15.80;ReadPosRankSum=-8.639;VQSLOD=1.2457;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:29:73.18:570,73,0	0/0:6,0:6:16.70:0,17,112	0/0:24,0:10:4.65:0,5,97	0/0:17,0:7:5.50:0,6,72	0/0:17,0:16:37.95:0,38,301	1/1:19,0:19:54.87:468,55,0	1/1:17,0:16:46.41:372,46,0	0/1:33,0:32:65.22:65,0,379	1/1:17,2:18:44.80:383,45,0	0/0:33,0:33:84.57:0,85,750	0/0:12,0:12:15.40:0,15,177	1/1:25,0:24:63.72:501,64,0	1/1:15,0:15:20.19:214,20,0	0/0:17,0:17:8.96:0,9,347	0/0:28,0:28:54.75:0,55,462	0/0:25,0:25:46.22:0,46,452	0/0:46,0:46:99:0,137,2075	0/0:19,0:19:49.59:0,50,447	0/0:28,0:25:55.53:0,56,522	0/0:12,0:11:24.98:0,25,201	0/0:12,0:12:30.16:0,30,202	1/1:3,0:3:8.96:77,9,0	1/1:8,2:10:23.66:218,24,0	1/1:13,0:13:28.71:232,29,0	0/0:22,1:23:37.30:0,37,303	0/0:29,0:29:79.78:0,80,641	0/0:26,0:25:46.18:0,46,446	0/0:20,0:20:50.78:0,51,506
chr10	46122629	.	AAG	A	2980.55	PASS	AB=0.973;AC=19;AF=0.339;AN=56;BaseQRankSum=-1.285;DP=582;FS=0.709;HRun=0;HaplotypeScore=94.1703;InbreedingCoeff=0.8741;MQ=59.07;MQ0=2;MQRankSum=-1.483;QD=15.94;ReadPosRankSum=-7.594;VQSLOD=1.7573;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:28,1:29:74:617,74,0	0/0:6,0:6:9.92:0,10,57	0/0:24,0:10:15.11:0,15,109	0/0:18,0:8:6.10:0,6,79	0/0:16,0:15:29.12:0,29,152	1/1:20,0:20:57.01:478,57,0	1/1:15,2:16:47.65:395,48,0	0/1:35,1:35:99:150,0,334	1/1:19,0:18:46.40:372,46,0	0/0:32,0:32:61.73:0,62,488	0/0:13,0:13:10.78:0,11,105	1/1:26,0:25:67.15:485,67,0	1/1:14,0:14:20.08:200,20,0	0/0:16,0:16:16.13:0,16,231	0/0:28,0:28:47.98:0,48,284	0/0:25,0:25:40.33:0,40,288	0/0:46,0:46:99:0,133,1662	0/0:19,0:19:41:0,41,293	0/0:29,0:26:57.13:0,57,410	0/0:13,0:12:16.30:0,16,147	0/0:12,0:12:18.36:0,18,88	1/1:3,0:3:8.90:65,9,0	1/1:10,0:10:21.12:184,21,0	1/1:13,0:13:28.93:245,29,0	0/0:23,0:23:32.45:0,32,211	0/0:28,0:28:61.72:0,62,384	0/0:26,0:25:30.42:0,30,267	0/0:21,0:21:49.91:0,50,348
chr10	46122630	.	AG	A	3142.45	PASS	AB=0.965;AC=23;AF=0.411;AN=56;BaseQRankSum=-0.915;DP=586;FS=12.528;HRun=1;HaplotypeScore=83.1061;InbreedingCoeff=0.5905;MQ=59.11;MQ0=2;MQRankSum=-0.531;QD=12.52;ReadPosRankSum=-6.882;VQSLOD=-0.5788;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:28,1:29:76.80:609,77,0	0/1:6,0:6:0.95:1,0,27	0/0:24,0:10:12.84:0,13,86	0/0:15,1:6:5.67:0,6,75	0/0:16,0:15:14.12:0,14,50	1/1:18,2:20:58.81:483,59,0	1/1:18,0:17:50.11:379,50,0	0/1:33,3:35:99:193,0,254	1/1:18,2:19:50.19:391,50,0	0/0:32,0:32:26.88:0,27,339	0/1:13,0:13:7.91:8,0,47	1/1:23,3:25:68.99:519,69,0	1/1:13,1:14:26.81:213,27,0	0/1:15,1:16:17.24:17,0,134	0/0:28,0:28:23.31:0,23,149	0/0:25,0:25:0.73:0,1,152	0/0:45,1:46:99:0,112,1268	0/0:19,0:19:18.47:0,18,181	0/0:31,0:28:30.49:0,30,337	0/0:13,0:12:9.08:0,9,121	0/0:13,0:13:8.43:0,8,27	1/1:3,0:3:8.94:68,9,0	1/1:11,0:11:29.92:210,30,0	1/1:11,2:13:28.18:227,28,0	0/0:23,0:23:16.43:0,16,126	0/0:27,1:28:19.34:0,19,223	0/1:25,1:25:25.37:25,0,149	0/0:21,0:21:18.04:0,18,192
chr10	46125097	.	AAACAACAAC	A	5616.12	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=12.101;DP=669;FS=2.924;HRun=0;HaplotypeScore=185.9255;InbreedingCoeff=0.9628;MQ=71.34;MQ0=0;MQRankSum=-12.561;QD=50.60;ReadPosRankSum=2.156;VQSLOD=4.8079;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,138,6454	1/1:3,6:9:9.50:264,10,0	0/0:27,0:26:60.20:0,60,2272	0/0:22,0:21:54.19:0,54,2073	0/0:21,0:21:63.20:0,63,2767	0/0:13,0:13:39.13:0,39,1845	0/0:27,0:27:72.25:0,72,3143	0/0:29,0:29:78.26:0,78,3235	0/0:29,0:29:81.28:0,81,3828	0/0:26,0:26:72.24:0,72,3105	0/0:16,0:16:45.15:0,45,2064	0/0:36,0:37:96.33:0,96,4333	0/0:17,0:17:45.15:0,45,2091	0/0:30,0:30:78.27:0,78,3651	1/1:5,25:30:66.23:1933,66,0	0/0:25,0:25:72.25:0,72,3344	0/0:41,0:41:99:0,114,5348	0/0:31,0:31:81.28:0,81,3615	1/1:9,9:18:27.09:791,27,0	1/1:2,15:17:42.10:1161,42,0	1/1:9,3:12:5.09:236,5,0	0/0:16,0:17:51.18:0,51,2331	0/0:18,0:18:54.17:0,54,2389	0/0:23,0:23:60.21:0,60,2797	0/0:23,0:23:63.22:0,63,2829	0/0:26,0:26:69.24:0,69,2984	1/1:4,21:25:41.66:1230,42,0	0/0:8,0:8:24.08:0,24,948
chr10	46127686	.	ATT	A	1835.01	PASS	AB=0.728;AC=25;AF=0.446;AN=56;BaseQRankSum=-1.367;DP=461;FS=11.715;HRun=16;HaplotypeScore=69.5203;InbreedingCoeff=0.4625;MQ=66.39;MQ0=6;MQRankSum=1.442;QD=7.55;ReadPosRankSum=4.821;VQSLOD=-0.4399;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,16:29:31.53:275,32,0	0/0:4,0:7:11.97:0,12,115	0/0:18,0:9:10.85:0,11,85	0/1:10,0:6:4.29:4,0,34	0/1:10,4:26:35.43:35,0,108	1/1:2,6:11:17.36:165,17,0	1/1:4,14:19:44.42:349,44,0	0/0:24,1:28:34.66:0,35,354	1/1:5,5:11:8.88:117,9,0	0/1:8,1:14:9.48:9,0,58	0/0:7,0:10:2.37:0,2,9	1/1:3,8:11:11.10:99,11,0	1/1:3,8:12:26.61:208,27,0	0/1:13,0:13:16.37:16,0,80	0/0:9,0:15:30.01:0,30,302	0/0:2,0:9:9.49:0,9,34	0/0:28,0:32:72.81:0,73,799	0/1:5,2:16:24.61:25,0,55	0/0:18,0:26:68.46:0,68,727	0/0:6,0:12:21.03:0,21,220	0/0:9,0:13:11.95:0,12,98	1/1:4,12:16:28.57:244,29,0	1/1:2,4:8:11.66:87,12,0	1/1:4,19:24:37.57:365,38,0	0/1:3,1:9:18.40:22,0,18	0/0:8,0:22:38.06:0,38,183	0/0:11,0:19:21.93:0,22,295	0/1:4,1:8:12.61:13,0,21
chr10	46128646	.	T	TCCAC	16412.47	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-13.640;DP=683;FS=12.327;HRun=0;HaplotypeScore=112.7885;InbreedingCoeff=0.9909;MQ=81.67;MQ0=0;MQRankSum=-7.692;QD=65.39;ReadPosRankSum=-0.574;VQSLOD=6.4992;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,45:52:99:3292,120,0	0/0:17,0:17:48.12:0,48,904	0/0:25,0:25:66.17:0,66,1195	0/0:19,0:18:50.38:0,50,888	0/0:14,0:14:42.14:0,42,837	1/1:1,12:14:39.13:1044,39,0	1/1:5,16:21:51.18:1396,51,0	1/1:7,20:34:96.24:2270,96,0	1/1:2,20:24:59.96:1658,60,0	0/0:26,0:26:72.21:0,72,1371	0/0:11,0:11:30.10:0,30,599	1/1:3,19:25:57.20:1564,57,0	1/1:4,15:23:56.87:1575,57,0	0/0:22,0:22:63.22:0,63,1257	0/0:50,0:50:99:0,132,2591	0/0:25,0:25:69.21:0,69,1316	0/0:34,0:34:99:0,99,1940	0/0:27,0:27:81.19:0,81,1535	0/0:20,0:20:54.13:0,54,986	0/0:15,0:15:45.15:0,45,898	0/0:49,0:49:99:0,141,2772	1/1:7,10:17:33.11:801,33,0	1/1:1,8:9:24.08:671,24,0	1/1:5,26:32:78.02:2142,78,0	0/0:20,0:20:60.21:0,60,1198	0/0:30,0:30:87.30:0,87,1737	0/0:25,0:25:66.22:0,66,1277	0/0:3,0:3:9.03:0,9,180
chr10	46130753	.	C	CT	12624.54	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-8.951;DP=506;FS=3.625;HRun=8;HaplotypeScore=41.9118;InbreedingCoeff=0.9844;MQ=75.67;MQ0=0;MQRankSum=-3.127;QD=28.31;ReadPosRankSum=3.873;VQSLOD=4.9509;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,30:34:78.23:900,78,0	1/1:1,8:9:24.07:277,24,0	0/0:15,0:15:32.98:0,33,293	0/0:13,0:13:23.92:0,24,201	1/1:2,19:21:51.11:573,51,0	1/1:2,22:24:57.17:658,57,0	1/1:1,9:10:27.08:312,27,0	1/1:5,17:22:48.10:530,48,0	1/1:4,12:16:30.09:346,30,0	1/1:4,19:23:60.16:681,60,0	1/1:1,16:17:42.08:470,42,0	1/1:2,14:16:39.12:450,39,0	1/1:0,13:14:38.95:430,39,0	1/1:2,11:13:30.09:346,30,0	1/1:3,26:29:72.21:831,72,0	1/1:0,16:16:45.13:519,45,0	0/0:31,0:31:84.04:0,84,768	1/1:0,11:11:33.10:381,33,0	1/1:4,10:14:30.09:346,30,0	1/1:0,19:19:57.10:630,57,0	1/1:1,14:15:39.12:450,39,0	1/1:2,10:12:27.08:311,27,0	1/1:3,12:15:39.11:442,39,0	1/1:4,22:26:60.18:692,60,0	1/1:2,12:14:11.65:388,12,0	1/1:5,16:20:48.14:554,48,0	1/1:2,24:27:72.21:831,72,0	1/1:0,8:8:24.07:277,24,0
chr10	46132390	.	TAA	T	1295.08	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=2.953;DP=502;FS=4.090;HRun=15;HaplotypeScore=85.1627;InbreedingCoeff=0.8243;MQ=53.62;MQ0=36;MQRankSum=-3.774;QD=9.32;ReadPosRankSum=4.306;VQSLOD=2.1274;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:12,4:16:23.80:195,24,0	0/0:4,0:4:6.06:0,6,35	0/0:56,0:11:6.38:0,6,51	0/0:60,0:11:1.39:0,1,81	0/0:14,0:14:3.58:0,4,78	1/1:6,4:10:14.69:116,15,0	1/1:5,4:10:20.49:181,20,0	1/1:6,0:20:16.01:86,16,0	1/1:4,5:11:7.44:60,7,0	0/0:17,0:17:28.60:0,29,181	0/0:20,0:20:21.52:0,22,153	1/1:6,3:10:17.33:111,17,0	1/1:8,3:10:25.76:190,26,0	0/0:5,0:5:6.86:0,7,47	0/0:20,0:20:42.07:0,42,341	1/1:15,0:14:2.89:17,3,0	0/0:26,0:26:63.28:0,63,757	0/0:13,0:13:11.52:0,12,87	0/0:21,0:16:37.62:0,38,284	0/0:18,0:17:39.65:0,40,313	0/0:7,0:4:5.65:0,6,16	1/1:4,3:7:11.98:104,12,0	1/1:8,9:18:44.62:373,45,0	1/1:4,4:9:8.57:66,9,0	0/0:18,0:18:16.28:0,16,138	0/0:20,0:19:16.01:0,16,95	0/0:21,0:21:33.54:0,34,406	0/0:17,0:16:23.96:0,24,189
chr10	46132405	.	AC	A	4653.49	PASS	AB=0.955;AC=52;AF=0.929;AN=56;BaseQRankSum=-1.791;DP=537;FS=1.481;HRun=1;HaplotypeScore=74.4012;InbreedingCoeff=0.2660;MQ=53.97;MQ0=46;MQRankSum=0.252;QD=10.01;ReadPosRankSum=0.912;VQSLOD=2.6825;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:14:19.79:95,20,0	1/1:4,0:4:8.99:44,9,0	0/1:64,7:14:35.72:51,0,36	0/0:67,5:13:5.32:0,5,100	1/1:20,0:20:58.91:423,59,0	1/1:4,7:11:13.48:72,13,0	1/1:10,1:11:27.64:128,28,0	1/1:18,0:17:25.05:129,25,0	1/1:11,0:11:14.16:60,14,0	1/1:15,0:15:44.07:338,44,0	1/1:17,1:18:52.31:415,52,0	1/1:9,1:9:26.04:160,26,0	1/1:12,0:10:26.07:134,26,0	1/1:5,0:5:14.41:102,14,0	1/1:17,3:20:43.39:303,43,0	1/1:1,10:10:3:26,3,0	0/1:29,0:29:28.40:28,0,280	1/1:12,0:11:25.89:168,26,0	1/1:24,0:15:21.97:138,22,0	1/1:20,0:19:25.83:170,26,0	1/1:9,0:5:13.77:102,14,0	1/1:10,0:9:20.87:102,21,0	1/1:22,0:22:47.33:224,47,0	1/1:10,1:11:3.40:54,3,0	1/1:18,0:18:49.83:351,50,0	1/1:20,0:19:52.97:419,53,0	1/1:24,0:21:39.07:215,39,0	1/1:15,0:14:30.69:202,31,0
chr10	46132406	.	CAAA	C	1688.99	PASS	AB=0.870;AC=19;AF=0.339;AN=56;BaseQRankSum=1.034;DP=538;FS=8.210;HRun=15;HaplotypeScore=97.5313;InbreedingCoeff=0.7401;MQ=53.95;MQ0=46;MQRankSum=-3.011;QD=8.36;ReadPosRankSum=1.708;VQSLOD=0.1026;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:5,9:14:8.29:163,0,8	0/0:4,0:4:7.82:0,8,32	0/1:73,0:14:1.06:1,0,65	0/0:70,0:13:12.85:0,13,187	0/0:21,0:21:30.91:0,31,208	1/1:7,4:11:15:158,15,0	1/1:6,5:11:26.32:281,26,0	0/1:18,0:17:10.01:10,0,22	1/1:9,2:11:19.99:150,20,0	0/0:15,0:15:36.56:0,37,321	0/0:18,0:18:29.01:0,29,259	1/1:6,4:9:22.55:217,23,0	1/1:10,2:10:16.88:158,17,0	0/0:5,0:5:9.40:0,9,89	0/0:20,0:20:18.63:0,19,291	0/0:11,0:10:2.22:0,2,7	0/0:29,0:29:69.22:0,69,1024	0/0:11,0:10:15.77:0,16,132	0/0:23,0:15:29.43:0,29,260	0/0:21,0:21:50.86:0,51,449	0/0:9,0:5:7.21:0,7,25	1/1:4,6:9:20.90:205,21,0	1/1:13,8:21:39.47:410,39,0	1/1:5,6:11:14.80:137,15,0	0/0:17,0:17:23.25:0,23,197	0/0:20,0:19:25.97:0,26,184	0/0:22,0:20:46.59:0,47,531	0/0:15,0:14:16.07:0,16,175
chr10	46132575	.	TTTTTG	T	5256.84	PASS	AB=1.000;AC=22;AF=0.393;AN=56;BaseQRankSum=1.451;DP=452;FS=0.935;HRun=0;HaplotypeScore=114.9677;InbreedingCoeff=0.8077;MQ=58.98;MQ0=9;MQRankSum=-6.196;QD=26.68;ReadPosRankSum=0.273;VQSLOD=4.3466;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:48.11:0,48,1185	0/0:7,0:7:21.07:0,21,541	0/0:28,0:13:22.21:0,22,356	0/1:37,0:17:7.82:8,0,34	1/1:14,13:27:51.13:917,51,0	0/0:14,0:14:39.13:0,39,1064	0/0:17,0:17:36.12:0,36,922	1/1:18,0:15:17.20:93,17,0	0/0:14,0:14:20.64:0,21,343	1/1:6,11:17:39.13:700,39,0	1/1:13,7:20:45.14:802,45,0	0/0:7,0:7:3.55:0,4,266	0/0:8,0:8:14.09:0,14,414	1/1:0,5:5:15.05:279,15,0	0/0:19,0:19:45.15:0,45,1062	1/1:6,4:10:18.05:311,18,0	0/0:19,0:19:48.16:0,48,1360	1/1:10,2:12:24.97:482,25,0	0/0:21,0:18:33.09:0,33,748	0/0:23,0:22:51.17:0,51,1258	0/0:7,0:7:15.05:0,15,388	0/0:12,0:12:33.11:0,33,882	0/0:13,0:13:30.10:0,30,766	0/1:11,0:11:9.54:10,0,249	1/1:11,5:16:36.11:642,36,0	1/1:11,11:22:51.17:958,51,0	0/0:22,0:22:54.18:0,54,1341	1/1:1,1:2:3.01:56,3,0
chr10	46132587	.	T	TTC	466.70	PASS	AB=0.607;AC=1;AF=0.018;AN=56;BaseQRankSum=-1.493;DP=468;FS=5.974;HRun=0;HaplotypeScore=118.0236;InbreedingCoeff=0.2192;MQ=52.35;MQ0=11;MQRankSum=-1.093;QD=27.45;ReadPosRankSum=-1.847;VQSLOD=4.5477;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:27:57.69:0,58,881	0/0:8,0:8:24.07:0,24,346	0/0:37,0:14:33.08:0,33,427	0/0:43,0:16:13.86:0,14,154	0/0:25,0:25:68.54:0,69,605	0/0:14,0:14:39.60:0,40,598	0/0:13,0:13:36.12:0,36,550	0/1:6,11:13:5.97:541,0,6	0/0:14,0:14:12.96:0,13,226	0/0:16,0:16:44.56:0,45,373	0/0:19,0:19:49.87:0,50,447	0/0:7,0:7:18.53:0,19,258	0/0:8,0:8:21.02:0,21,286	0/0:6,0:6:14.82:0,15,98	0/0:18,0:18:54.11:0,54,750	0/0:11,0:11:30.38:0,30,329	0/0:18,0:18:51.17:0,51,780	0/0:12,0:12:35.80:0,36,369	0/0:23,0:20:57.14:0,57,776	0/0:23,0:22:60.19:0,60,888	0/0:9,0:8:18.06:0,18,276	0/0:13,0:12:36.12:0,36,551	0/0:12,0:12:36.09:0,36,506	0/0:9,0:9:21.04:0,21,289	0/0:14,0:14:40.30:0,40,331	0/0:23,0:22:62.71:0,63,572	0/0:26,0:26:66.21:0,66,972	0/0:2,0:2:2.97:0,3,20
chr10	46132592	.	T	TTC	1004.20	PASS	AB=0.887;AC=8;AF=0.143;AN=56;BaseQRankSum=2.439;DP=473;FS=1.102;HRun=0;HaplotypeScore=121.0367;InbreedingCoeff=-0.1655;MQ=50.18;MQ0=10;MQRankSum=-0.072;QD=7.72;ReadPosRankSum=-0.711;VQSLOD=3.0629;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:25:52.94:0,53,796	0/0:8,0:8:24.08:0,24,367	0/0:35,0:14:34.36:0,34,470	0/0:39,0:11:2.74:0,3,60	0/1:24,2:26:99:248,0,187	0/0:14,0:14:39.60:0,40,598	0/0:13,0:13:36.12:0,36,550	0/0:19,0:15:28.31:0,28,224	0/0:13,0:13:16.17:0,16,199	0/1:16,0:16:87.42:101,0,87	0/1:14,4:18:33.67:190,0,34	0/0:7,0:7:15.14:0,15,218	0/0:8,0:8:20.26:0,20,252	0/1:10,0:10:35.68:50,0,36	0/0:21,0:21:60.18:0,60,859	0/1:10,1:11:86.34:86,0,101	0/0:20,0:20:57.18:0,57,844	0/1:7,6:13:98.34:166,0,98	0/0:21,0:19:53.64:0,54,751	0/0:22,0:21:51.17:0,51,767	0/0:8,0:7:18.06:0,18,275	0/0:14,0:13:39.08:0,39,557	0/0:12,0:12:34.91:0,35,460	0/0:10,0:10:9.46:0,9,195	0/1:10,2:12:10.58:144,0,11	0/1:21,3:23:99:153,0,135	0/0:30,0:30:78:0,78,1181	0/0:2,0:2:2.90:0,3,16
chr10	46132602	.	GT	G	1931.86	PASS	AB=0.790;AC=21;AF=0.375;AN=56;BaseQRankSum=2.041;DP=485;FS=4.088;HRun=13;HaplotypeScore=110.5247;InbreedingCoeff=0.4320;MQ=50.17;MQ0=15;MQRankSum=-3.309;QD=8.94;ReadPosRankSum=-1.191;VQSLOD=2.6400;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:28:22.96:0,23,130	0/1:2,5:7:8.22:110,0,8	0/0:35,1:11:13.16:0,13,98	0/0:38,1:9:2.70:0,3,16	1/1:11,15:27:7.04:289,7,0	0/0:8,0:14:29.04:0,29,167	0/0:11,0:12:9.28:0,9,61	0/1:8,0:12:7.76:9,0,8	0/0:5,0:13:14.23:0,14,70	1/1:6,11:18:8.64:217,9,0	1/1:7,7:15:8.83:189,9,0	0/0:8,0:8:13.52:0,14,76	0/0:8,0:8:11.32:0,11,68	1/1:7,4:11:19.57:145,20,0	0/1:10,10:21:5.75:253,0,6	1/1:5,4:9:19.94:141,20,0	0/0:20,0:20:22.23:0,22,366	0/1:11,2:13:55.86:127,0,56	0/1:19,3:23:33.61:34,0,296	0/0:23,1:25:12.04:0,12,394	0/1:9,1:8:30.45:30,0,44	0/0:10,0:13:27.06:0,27,153	0/0:13,0:17:28.25:0,28,154	0/1:5,0:5:2.93:3,0,17	1/1:4,8:12:32.78:239,33,0	1/1:12,13:23:44.70:334,45,0	0/0:28,1:30:52.57:0,53,621	0/0:2,0:2:3:0,3,29
chr10	46132623	.	TG	T	813.03	PASS	AB=0.988;AC=21;AF=0.375;AN=56;BaseQRankSum=5.602;DP=457;FS=3.843;HRun=1;HaplotypeScore=108.5924;InbreedingCoeff=0.5627;MQ=52.89;MQ0=12;MQRankSum=-2.095;QD=4.32;ReadPosRankSum=0.304;VQSLOD=0.4786;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:29:32.29:239,32,0	0/0:8,0:8:23.98:0,24,239	0/1:25,0:9:6.14:6,0,45	0/0:21,3:7:5.51:0,6,74	0/0:24,0:23:67.69:0,68,579	1/1:12,2:14:29.44:153,29,0	1/1:8,0:8:17.69:85,18,0	0/1:17,0:16:21.65:22,0,36	0/1:14,0:14:3.68:44,0,4	0/0:14,0:14:41.04:0,41,368	0/0:10,0:10:22.68:0,23,165	1/1:9,0:9:4.08:55,4,0	1/1:6,0:6:7.89:32,8,0	0/1:14,1:15:46.29:46,0,179	0/0:21,0:21:55.75:0,56,485	0/0:11,0:10:8.53:0,9,135	0/0:20,0:20:16.28:0,16,389	0/0:18,0:17:46.95:0,47,452	0/0:26,0:21:58.26:0,58,595	0/0:21,2:23:15.89:0,16,551	0/1:11,0:9:4.77:5,0,151	1/1:15,0:14:4.82:115,5,0	1/1:17,0:17:15.59:150,16,0	1/1:7,0:7:15.55:54,16,0	0/0:15,0:15:40.71:0,41,378	0/0:22,0:20:42.62:0,43,474	0/0:32,0:31:66.95:0,67,632	0/0:1,0:1:3:0,3,28
chr10	46132624	.	GT	G	1391.77	PASS	AB=0.794;AC=17;AF=0.304;AN=56;BaseQRankSum=3.719;DP=456;FS=13.461;HRun=8;HaplotypeScore=106.3800;InbreedingCoeff=0.3383;MQ=54.30;MQ0=12;MQRankSum=-3.922;QD=8.09;ReadPosRankSum=-0.265;VQSLOD=0.4841;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:17,13:29:24.75:296,25,0	0/0:8,0:8:20.30:0,20,189	0/1:24,0:10:2.49:2,0,50	0/0:24,0:7:7.52:0,8,92	0/0:25,0:24:61.49:0,61,547	1/1:7,7:14:2.38:227,2,0	0/1:5,3:8:20.89:96,0,21	1/1:6,11:16:15.01:142,15,0	1/1:7,7:14:21.02:194,21,0	0/0:15,0:15:34.34:0,34,316	0/0:10,0:10:23.08:0,23,179	0/1:4,5:9:16.59:118,0,17	0/1:4,2:6:25.47:49,0,25	0/0:15,0:15:9.27:0,9,195	0/0:21,0:21:51.50:0,51,337	0/1:10,1:10:5.22:5,0,106	0/0:20,0:20:38.75:0,39,417	0/0:18,0:17:44.40:0,44,353	0/0:26,0:21:45.05:0,45,492	0/0:22,0:22:46.25:0,46,461	0/0:11,0:9:3.59:0,4,132	0/1:13,2:14:28.32:104,0,28	1/1:8,9:17:0.03:200,0,0	0/1:3,4:7:2.18:125,0,2	0/0:15,0:15:44.02:0,44,349	0/0:22,0:20:44.26:0,44,386	0/0:31,0:30:74.26:0,74,588	0/0:1,0:1:2.68:0,3,11
chr10	46132633	.	GT	G	3824.23	PASS	AB=0.792;AC=45;AF=0.804;AN=56;BaseQRankSum=-2.255;DP=452;FS=28.010;HRun=11;HaplotypeScore=95.7889;InbreedingCoeff=0.0917;MQ=59.54;MQ0=8;MQRankSum=-1.281;QD=9.26;ReadPosRankSum=4.172;VQSLOD=0.6790;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:13,14:27:16.40:138,16,0	1/1:4,6:10:8.94:74,9,0	0/1:17,0:9:12.11:12,0,24	0/0:18,1:10:6.76:0,7,109	1/1:11,14:24:4.16:239,4,0	1/1:9,3:12:1.89:88,2,0	0/1:7,2:9:18.27:101,0,18	1/1:13,3:17:8.74:116,9,0	1/1:5,6:11:23.93:190,24,0	1/1:7,7:14:23.95:196,24,0	1/1:7,3:10:8.96:74,9,0	0/1:2,9:11:13.65:119,0,14	0/1:5,2:7:25.34:57,0,25	0/1:10,5:15:20.15:62,0,20	1/1:6,17:24:40.97:326,41,0	1/1:10,4:14:25.97:201,26,0	0/0:20,0:20:44.50:0,45,406	1/1:4,15:18:34.97:277,35,0	1/1:16,4:16:10.74:96,11,0	1/1:9,14:23:26.83:221,27,0	1/1:4,6:9:14.96:121,15,0	0/1:12,2:13:32.86:75,0,33	0/1:12,5:17:31.50:80,0,32	1/1:5,4:9:2.31:145,2,0	1/1:6,9:16:22.97:178,23,0	1/1:10,15:23:41.92:344,42,0	1/1:17,17:33:32.70:271,33,0	1/1:1,1:2:2.98:25,3,0
chr10	46133558	.	CGTGTGCGTGTGCGTGT	C	22899.57	PASS	AB=1.000;AC=39;AF=0.696;AN=56;BaseQRankSum=8.517;DP=647;FS=2.267;HRun=0;HaplotypeScore=215.4955;InbreedingCoeff=0.0497;MQ=49.40;MQ0=5;MQRankSum=-9.216;QD=40.53;ReadPosRankSum=8.410;VQSLOD=3.4828;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:43,0:42:71.92:344,0,72	1/1:5,0:5:6.02:245,6,0	0/0:25,0:11:17.24:0,17,455	0/0:28,0:21:49.63:0,50,1211	1/1:1,18:19:14.90:517,15,0	1/1:19,0:19:24.08:982,24,0	0/1:24,0:25:24.05:607,0,24	0/1:23,0:23:34.25:783,0,34	0/1:19,0:19:14.36:606,0,14	1/1:3,18:21:48.04:1397,48,0	1/1:2,14:16:24.08:1107,24,0	0/1:28,0:28:38.87:1072,0,39	1/1:25,0:25:20.15:1589,20,0	1/1:3,16:20:32.84:1500,33,0	0/1:26,0:26:6.12:1310,0,6	1/1:0,25:25:25.40:1245,25,0	0/0:27,0:27:69.13:0,69,3712	1/1:0,17:17:15.05:693,15,0	0/1:21,0:20:32.65:738,0,33	1/1:25,0:25:4.09:967,4,0	0/1:39,0:39:6.96:350,0,7	0/1:23,0:23:68.86:931,0,69	1/1:21,0:21:30.10:1244,30,0	0/1:31,0:31:40.27:592,0,40	1/1:3,23:26:30.09:1386,30,0	1/1:0,15:15:39.05:1235,39,0	0/1:24,0:24:23.86:1183,0,24	1/1:0,9:9:6.02:278,6,0
chr10	46133564	.	CGTGTGCGTGTGTGTGT	C	23054.14	PASS	AB=0.843;AC=47;AF=0.839;AN=56;BaseQRankSum=7.429;DP=640;FS=12.359;HRun=0;HaplotypeScore=207.0451;InbreedingCoeff=0.5351;MQ=48.27;MQ0=7;MQRankSum=-6.825;QD=41.84;ReadPosRankSum=6.355;VQSLOD=2.8622;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,37:41:9.03:416,9,0	1/1:0,5:5:6.02:277,6,0	0/0:27,0:11:23.94:0,24,546	0/0:32,0:24:47.81:0,48,1364	1/1:19,0:19:17.86:452,18,0	1/1:0,19:19:24.08:1108,24,0	1/1:2,21:23:13.14:689,13,0	0/1:22,0:22:77.46:289,0,77	0/1:2,17:19:32.76:675,0,33	1/1:20,0:19:38.55:1050,39,0	1/1:15,0:15:24.08:968,24,0	1/1:4,24:28:27.09:1246,27,0	1/1:0,23:23:39.13:1800,39,0	1/1:19,0:19:35.69:1350,36,0	1/1:2,26:28:32.51:1523,33,0	1/1:26,0:25:26.37:1083,26,0	0/0:30,0:29:72.18:0,72,3840	0/1:19,0:19:20.70:567,0,21	1/1:7,16:21:47.68:1078,48,0	1/1:0,22:22:24.08:1109,24,0	1/1:4,35:39:9.03:416,9,0	1/1:6,18:24:24.08:1097,24,0	1/1:0,20:20:30.10:1386,30,0	1/1:4,23:27:14.69:693,15,0	1/1:25,0:25:30.09:1206,30,0	1/1:15,0:15:33.07:952,33,0	1/1:1,19:20:30.10:1386,30,0	1/1:9,0:9:6.02:239,6,0
chr10	46133570	.	CGTGT	C	5890.18	PASS	AB=1.000;AC=48;AF=0.857;AN=56;BaseQRankSum=9.605;DP=610;FS=7.187;HRun=0;HaplotypeScore=182.8793;InbreedingCoeff=0.6342;MQ=48.74;MQ0=7;MQRankSum=-6.931;QD=11.22;ReadPosRankSum=7.169;VQSLOD=3.1729;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:38,0:37:9.01:84,9,0	1/1:5,0:5:6.01:56,6,0	0/0:27,0:11:19.30:0,19,256	0/0:30,0:23:40.35:0,40,628	1/1:20,0:20:4.38:135,4,0	1/1:19,0:19:24.03:225,24,0	1/1:23,0:23:18.03:193,18,0	1/1:5,13:18:18.33:485,18,0	0/1:19,0:19:14.06:124,0,14	1/1:20,0:19:20.32:310,20,0	1/1:16,0:16:24.07:268,24,0	1/1:25,0:25:27.04:265,27,0	1/1:23,0:23:39.05:370,39,0	1/1:19,0:19:35.73:408,36,0	1/1:26,0:26:32.97:310,33,0	1/1:26,0:25:27.08:303,27,0	0/0:28,0:27:63.20:0,63,1293	0/1:19,0:19:3.88:148,0,4	1/1:21,0:19:28.50:305,28,0	1/1:22,0:22:24.03:227,24,0	1/1:36,0:36:9.01:84,9,0	1/1:18,0:18:23.93:214,24,0	1/1:20,0:20:30.04:284,30,0	1/1:24,0:24:14.71:141,15,0	1/1:24,1:25:30.08:337,30,0	1/1:15,0:15:23.99:269,24,0	1/1:19,0:19:30.04:282,30,0	1/1:9,0:9:6.02:68,6,0
chr10	46134577	.	AAAGG	A	1321.72	PASS	AC=28;AF=0.519;AN=54;BaseQRankSum=-0.639;DP=207;FS=1.637;HRun=0;HaplotypeScore=35.5455;InbreedingCoeff=0.8110;MQ=66.79;MQ0=4;MQRankSum=1.461;QD=15.02;ReadPosRankSum=-0.233;VQSLOD=2.8433;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:29.96:0,30,284	1/1:3,0:3:2.98:22,3,0	0/0:26,0:14:26.02:0,26,242	0/0:16,0:5:13.68:0,14,121	1/1:5,0:5:5.99:50,6,0	0/0:5,0:5:15:0,15,133	0/0:12,0:12:30:0,30,265	0/0:9,0:8:12.01:0,12,114	0/0:6,0:6:11.98:0,12,102	1/1:9,0:9:24.03:226,24,0	1/1:2,0:2:5.99:50,6,0	0/0:7,0:7:18.01:0,18,162	0/0:7,0:7:17.88:0,18,149	1/1:4,0:4:3:25,3,0	1/1:10,0:10:18.88:167,19,0	1/1:5,0:5:8.99:75,9,0	0/0:2,0:2:2.94:0,3,18	1/1:5,0:5:5.99:49,6,0	1/1:6,6:12:17.98:151,18,0	1/1:6,0:6:14.93:118,15,0	1/1:12,0:12:29.87:241,30,0	0/0:2,0:2:6:0,6,54	0/0:2,0:2:6:0,6,54	0/0:10,0:10:20.94:0,21,173	1/1:7,0:7:17.98:150,18,0	1/1:4,0:4:12.01:111,12,0	1/1:4,0:4:11.94:92,12,0	./.
chr10	46136578	.	AGACCC	A	2225.89	PASS	AB=0.974;AC=24;AF=0.429;AN=56;BaseQRankSum=8.761;DP=361;FS=48.352;HRun=0;HaplotypeScore=89.1836;InbreedingCoeff=-0.5893;MQ=36.67;MQ0=18;MQRankSum=-2.613;QD=7.37;ReadPosRankSum=-0.916;VQSLOD=-0.4515;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:17,0:16:24.61:25,0,432	0/1:4,0:4:13.72:14,0,16	0/0:16,0:3:1.82:0,2,5	0/0:19,0:4:5.89:0,6,79	0/1:16,0:11:48.06:100,0,48	0/1:15,0:14:94.68:95,0,134	0/1:15,0:15:99:235,0,100	0/1:23,3:25:26.12:26,0,352	0/0:7,0:7:19.58:0,20,250	0/1:8,0:8:19.34:159,0,19	0/1:18,0:14:84.02:84,0,87	0/1:10,0:8:32.39:32,0,235	0/0:9,0:9:19.67:0,20,254	0/1:9,1:10:58.45:120,0,58	1/1:10,0:10:6.79:79,7,0	0/1:10,0:10:75.73:83,0,76	0/1:21,0:21:99:155,0,345	0/1:9,2:11:99:153,0,162	0/1:15,1:16:99:216,0,234	0/1:14,1:13:99:163,0,126	0/1:6,0:6:17.66:18,0,71	0/1:8,0:8:9.78:10,0,162	0/1:7,0:6:10.99:11,0,108	0/0:6,0:6:8.84:0,9,104	0/1:16,0:13:48.35:92,0,48	0/1:16,1:16:99:250,0,143	0/1:22,0:21:99:258,0,140	0/1:3,0:3:0:0,0,0
chr10	46136582	.	CCAAAAAA	C	2428.61	PASS	AB=0.927;AC=19;AF=0.339;AN=56;BaseQRankSum=8.926;DP=360;FS=40.769;HRun=0;HaplotypeScore=100.5818;InbreedingCoeff=-0.1186;MQ=37.33;MQ0=18;MQRankSum=-1.429;QD=11.62;ReadPosRankSum=2.250;VQSLOD=0.3952;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:18:51.05:0,51,1205	1/1:4,0:4:8.98:78,9,0	0/0:18,0:3:1.36:0,1,3	0/0:22,0:4:6.02:0,6,142	0/1:15,0:11:23.06:152,0,23	0/1:13,2:14:68.76:119,0,69	0/1:11,3:14:71.76:221,0,72	0/0:21,0:20:50.13:0,50,509	0/0:8,0:7:2.84:0,3,300	1/1:9,0:9:9.94:267,10,0	0/1:16,0:13:42.20:109,0,42	0/0:10,0:8:17.64:0,18,479	0/0:8,0:8:24.01:0,24,541	0/1:11,0:11:44.44:88,0,44	1/1:10,1:11:9.82:146,10,0	0/1:9,0:10:32.45:148,0,32	0/0:20,0:20:40.76:0,41,880	0/1:11,0:11:71.69:135,0,72	0/1:17,2:17:99:236,0,108	0/1:14,0:13:64.06:125,0,64	0/1:4,1:5:20.25:20,0,31	0/0:8,0:8:20.85:0,21,339	0/0:7,0:7:20.90:0,21,381	0/0:5,0:6:10.14:0,10,116	0/1:17,0:14:12.85:204,0,13	0/1:13,0:14:29.18:270,0,29	0/1:19,1:21:49:276,0,49	0/0:3,0:3:2.99:0,3,23
chr10	46137089	.	CATTT	C	7522.86	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=16.111;DP=596;FS=2.355;HRun=0;HaplotypeScore=103.6900;InbreedingCoeff=0.9857;MQ=54.87;MQ0=10;MQRankSum=-6.061;QD=45.05;ReadPosRankSum=2.372;VQSLOD=5.1870;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,24:26:66.23:1271,66,0	0/0:11,0:11:33.11:0,33,898	0/0:23,0:6:12.04:0,12,319	0/0:36,0:10:30.10:0,30,782	0/0:24,0:24:72.25:0,72,1971	1/1:1,13:13:30.10:581,30,0	1/1:2,18:18:45.15:851,45,0	0/0:33,0:32:90.31:0,90,2437	1/1:0,15:15:45.15:872,45,0	0/0:29,0:29:87.28:0,87,2244	0/0:20,0:20:60.21:0,60,1642	1/1:2,17:19:48.16:930,48,0	1/1:0,10:10:27.09:523,27,0	0/0:17,0:17:48.15:0,48,1234	0/0:18,0:18:54.19:0,54,1456	0/0:30,0:30:90.31:0,90,2465	0/0:26,0:26:75.24:0,75,1994	0/0:30,0:28:81.26:0,81,2116	0/0:18,0:14:36.12:0,36,985	0/0:25,0:25:66.23:0,66,1808	0/0:25,0:25:72.18:0,72,1762	1/1:1,13:14:33.11:640,33,0	1/1:3,19:22:51.17:987,51,0	1/1:2,25:27:43.33:868,43,0	0/0:20,0:19:57.18:0,57,1415	0/0:16,0:16:45.15:0,45,1233	0/0:25,0:25:72.24:0,72,1910	0/0:3,0:3:9.03:0,9,239
chr10	46137910	.	TTGTG	T	10346.28	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-0.043;DP=965;FS=0.298;HRun=0;HaplotypeScore=176.9234;InbreedingCoeff=0.9939;MQ=64.36;MQ0=12;MQRankSum=0.373;QD=31.93;ReadPosRankSum=4.049;VQSLOD=4.9463;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,44:51:96.33:1637,96,0	0/0:7,0:8:20.86:0,21,460	0/0:29,0:9:16.53:0,17,132	0/0:50,0:25:24.54:0,25,340	0/0:24,0:25:56.92:0,57,1288	1/1:5,16:21:36.12:614,36,0	1/1:9,27:36:17.01:830,17,0	0/0:25,0:27:58.21:0,58,1221	1/1:4,32:36:75.25:1279,75,0	0/0:35,0:35:93.31:0,93,2207	0/0:22,0:22:63.18:0,63,1418	1/1:7,34:41:78.27:1331,78,0	1/1:4,27:31:60.21:1023,60,0	0/0:39,0:40:99:0,99,2377	0/0:36,0:39:95.90:0,96,2269	0/0:44,1:47:72.03:0,72,2805	0/0:43,0:46:99:0,111,2438	0/0:21,0:23:59.75:0,60,1298	0/0:23,0:23:36.09:0,36,754	0/0:24,0:24:16.74:0,17,1239	0/0:83,0:84:99:0,207,4759	1/1:3,28:31:54.13:921,54,0	1/1:4,20:24:47.88:818,48,0	1/1:7,45:52:99:1893,111,0	0/0:32,0:33:87.07:0,87,2007	0/0:37,0:39:99:0,101,2340	0/0:35,0:35:81.28:0,81,2025	0/0:11,0:11:30.10:0,30,686
chr10	46139915	.	A	ATT	7543.99	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=5.333;DP=571;FS=0.000;HRun=9;HaplotypeScore=94.7698;InbreedingCoeff=0.9756;MQ=66.51;MQ0=0;MQRankSum=-1.550;QD=17.88;ReadPosRankSum=0.041;VQSLOD=3.2773;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,23:26:63.21:970,63,0	0/0:5,0:6:8.99:0,9,148	0/0:9,0:9:6.96:0,7,136	0/0:12,0:12:20.82:0,21,222	1/1:7,0:34:59.99:216,60,0	1/1:2,20:21:51.14:759,51,0	1/1:3,12:16:30.10:437,30,0	1/1:9,0:31:48.53:193,49,0	1/1:2,9:12:30.10:444,30,0	1/1:4,0:33:44.43:239,44,0	1/1:5,1:34:70.33:287,70,0	1/1:3,14:17:39.13:598,39,0	1/1:0,16:16:36.12:554,36,0	1/1:4,0:21:37.90:139,38,0	0/0:19,0:19:54.14:0,54,575	1/1:2,1:28:64.99:259,65,0	0/0:25,0:25:75.19:0,75,798	1/1:1,1:16:32.95:149,33,0	0/0:20,0:20:48.09:0,48,499	0/0:28,0:28:78.19:0,78,828	0/0:9,0:9:23.95:0,24,224	1/1:15,11:26:51.10:696,51,0	1/1:3,13:16:36.12:554,36,0	1/1:0,12:12:36.12:554,36,0	1/1:1,0:19:42.42:145,42,0	1/1:1,0:22:52.46:182,52,0	0/0:20,0:20:54.11:0,54,565	1/1:0,0:21:49.78:171,50,0
chr10	46140759	.	CGG	C	804.26	PASS	AB=0.833;AC=21;AF=0.375;AN=56;BaseQRankSum=5.281;DP=261;FS=5.625;HRun=2;HaplotypeScore=42.7397;InbreedingCoeff=0.7567;MQ=56.26;MQ0=25;MQRankSum=-3.064;QD=14.36;ReadPosRankSum=-2.165;VQSLOD=0.0342;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,2:8:18.01:200,18,0	0/0:10,0:10:30.10:0,30,510	0/1:4,0:3:22.88:26,0,23	0/0:12,0:8:9.72:0,10,75	0/0:16,0:16:45.12:0,45,603	1/1:3,0:1:3:25,3,0	1/1:3,4:4:6.02:76,6,0	1/1:2,1:4:12.04:156,12,0	1/1:0,2:2:6.02:80,6,0	0/0:9,0:9:18.03:0,18,245	0/0:14,0:12:27.08:0,27,358	1/1:0,2:2:6.02:80,6,0	1/1:3,0:3:8.98:73,9,0	0/0:10,1:9:7.01:0,7,236	0/0:11,0:11:23.91:0,24,411	0/0:10,0:9:24.04:0,24,337	0/0:25,0:22:57.19:0,57,979	0/0:10,0:6:15.05:0,15,217	0/0:5,0:4:9.03:0,9,107	0/0:18,0:17:36.11:0,36,561	0/0:7,0:6:12.03:0,12,151	1/1:3,0:1:3:25,3,0	1/1:0,7:7:12.04:156,12,0	1/1:9,0:6:8.98:102,9,0	0/0:8,0:8:21.05:0,21,270	0/0:13,0:12:32.43:0,32,421	0/0:15,0:14:33.10:0,33,489	0/0:11,0:9:24.08:0,24,330
chr10	46140837	.	TA	T	233.16	PASS	AB=0.706;AC=9;AF=0.250;AN=36;BaseQRankSum=0.802;DP=243;FS=8.972;HRun=14;HaplotypeScore=57.7512;InbreedingCoeff=0.4784;MQ=67.70;MQ0=8;MQRankSum=-0.063;QD=5.42;ReadPosRankSum=2.017;VQSLOD=1.5621;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	1/1:2,1:3:2.97:21,3,0	0/0:42,0:17:10.95:0,11,112	0/0:16,0:4:6.46:0,6,50	0/0:18,0:19:28.16:0,28,343	./.	./.	./.	./.	0/0:16,0:16:18.27:0,18,188	0/0:17,0:19:35.67:0,36,298	./.	./.	0/0:7,0:7:15.02:0,15,139	1/1:1,5:7:10.96:68,11,0	0/0:8,0:8:17.86:0,18,153	0/0:20,1:23:36:0,36,439	0/0:10,0:11:23.84:0,24,223	0/1:1,4:6:10.13:71,0,10	0/1:3,9:12:7.06:102,0,7	0/1:5,0:5:0.02:0,0,0	./.	./.	./.	0/0:9,1:10:3.03:0,3,141	0/0:13,0:16:9.01:0,9,176	1/1:1,8:10:3.16:88,3,0	0/0:8,0:9:20.84:0,21,175
chr10	46141734	.	A	AT	13484.06	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-7.314;DP=569;FS=10.296;HRun=8;HaplotypeScore=70.9168;InbreedingCoeff=0.9771;MQ=81.71;MQ0=0;MQRankSum=-4.233;QD=27.08;ReadPosRankSum=2.960;VQSLOD=5.1406;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,19:20:54.16:622,54,0	1/1:2,11:13:30.09:346,30,0	0/0:20,0:20:19.43:0,19,183	0/0:18,0:17:17.42:0,17,261	1/1:4,25:29:75.01:802,75,0	1/1:2,12:13:30.09:346,30,0	1/1:3,18:21:48.14:554,48,0	1/1:4,24:28:69.15:771,69,0	1/1:1,15:15:33.10:380,33,0	1/1:4,22:26:66.14:721,66,0	1/1:2,11:13:32.99:351,33,0	1/1:6,16:21:36:414,36,0	1/1:4,12:16:33.03:364,33,0	1/1:4,15:19:45.09:504,45,0	1/1:1,25:26:63.19:727,63,0	1/1:0,14:14:33.10:378,33,0	0/0:33,0:33:81:0,81,732	1/1:3,16:19:39.12:450,39,0	1/1:5,3:8:12:123,12,0	1/1:3,16:19:48.05:523,48,0	1/1:1,7:8:15.04:173,15,0	1/1:2,14:16:48.11:537,48,0	1/1:4,20:24:57.17:658,57,0	1/1:2,22:24:60.14:676,60,0	1/1:0,11:11:33.10:381,33,0	1/1:6,28:34:84.21:950,84,0	1/1:1,38:39:93.28:1073,93,0	1/1:0,19:19:57.17:658,57,0
chr10	46141780	.	CGTGTGTGTGTGT	C	5956.80	PASS	AB=0.684;AC=17;AF=0.304;AN=56;BaseQRankSum=4.721;DP=483;FS=14.047;HRun=0;HaplotypeScore=186.9686;InbreedingCoeff=0.8430;MQ=50.46;MQ0=14;MQRankSum=-7.200;QD=44.45;ReadPosRankSum=4.165;VQSLOD=3.3686;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:15,4:19:23.98:585,24,0	0/0:10,0:10:15.05:0,15,699	0/0:15,0:9:15.05:0,15,749	0/0:13,0:8:18.06:0,18,658	0/0:21,0:23:20.40:0,20,732	1/1:5,11:15:21.07:672,21,0	0/1:7,6:12:99:506,0,137	0/0:27,0:27:54.19:0,54,2701	1/1:3,5:7:12.04:419,12,0	0/0:24,0:24:57.20:0,57,2961	0/0:15,0:16:27.09:0,27,1194	1/1:9,6:15:27.09:906,27,0	1/1:2,2:4:6.02:210,6,0	0/0:7,0:9:15.05:0,15,706	0/0:19,0:20:21.07:0,21,831	0/0:10,0:12:9.03:0,9,479	0/0:23,0:24:48.12:0,48,2303	0/0:18,0:20:45.97:0,46,1969	0/0:10,0:8:12.04:0,12,400	0/0:13,0:17:24.08:0,24,1266	0/0:8,0:9:14.40:0,14,852	1/1:12,5:17:24.08:703,24,0	1/1:9,10:19:36.11:1139,36,0	1/1:12,7:20:5.12:817,5,0	0/0:21,0:25:51.18:0,51,2626	0/0:28,0:26:54.18:0,54,2527	0/0:21,0:20:30.10:0,30,1483	0/0:16,0:16:30.10:0,30,1133
chr10	46143111	.	A	AT	4637.82	PASS	AB=0.686;AC=36;AF=0.643;AN=56;BaseQRankSum=5.353;DP=581;FS=0.415;HRun=12;HaplotypeScore=86.3823;InbreedingCoeff=0.6211;MQ=66.28;MQ0=2;MQRankSum=-1.782;QD=10.64;ReadPosRankSum=-1.007;VQSLOD=4.2088;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,32:45:38.33:514,38,0	0/0:7,1:8:11.89:0,12,87	0/0:9,0:9:11.69:0,12,87	0/0:9,0:8:5.98:0,6,46	1/1:6,1:32:57.90:310,58,0	1/1:1,20:22:23.11:372,23,0	1/1:5,18:26:58.91:571,59,0	0/1:14,13:26:4.41:250,0,4	1/1:2,10:15:22.87:224,23,0	1/1:7,0:23:45.03:256,45,0	1/1:6,1:19:26.19:154,26,0	0/1:4,10:14:13.81:194,0,14	1/1:4,10:14:26.58:233,27,0	1/1:2,0:15:19.84:98,20,0	0/0:33,0:33:62.44:0,62,459	1/1:6,0:19:15.17:76,15,0	0/0:20,1:22:23.54:0,24,327	1/1:7,1:29:41.03:226,41,0	0/1:19,2:22:11.60:12,0,243	0/0:23,0:23:41.63:0,42,304	0/0:19,0:18:38.69:0,39,284	1/1:9,15:26:14.82:276,15,0	0/1:5,16:21:14.64:358,0,15	1/1:3,11:14:2.13:182,2,0	1/1:4,1:18:1.62:93,2,0	1/1:12,2:29:36.20:182,36,0	0/0:20,1:21:14.57:0,15,259	1/1:1,0:6:11.36:57,11,0
chr10	46143468	.	TCAC	T	1141.97	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.686;DP=810;FS=3.818;HRun=0;HaplotypeScore=112.6168;InbreedingCoeff=0.9990;MQ=84.00;MQ0=0;MQRankSum=-3.969;QD=40.78;ReadPosRankSum=-3.312;VQSLOD=4.1544;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:93.28:0,93,2045	0/0:18,0:18:48.16:0,48,1058	0/0:26,0:26:69.23:0,69,1436	0/0:26,0:26:63.04:0,63,1225	0/0:37,0:37:99:0,105,2310	0/0:33,0:33:99:0,99,2191	0/0:25,0:25:69.24:0,69,1536	1/1:3,25:28:75.26:1237,75,0	0/0:30,0:30:87.27:0,87,1874	0/0:29,0:29:87.29:0,87,1927	0/0:22,0:22:66.23:0,66,1463	0/0:37,0:37:99:0,108,2434	0/0:30,0:30:84.29:0,84,1899	0/0:27,0:27:78.27:0,78,1742	0/0:42,0:42:99:0,126,2771	0/0:47,0:47:99:0,138,3099	0/0:25,0:25:72.25:0,72,1618	0/0:17,0:17:51.18:0,51,1156	0/0:25,0:25:66.22:0,66,1417	0/0:25,0:25:72.25:0,72,1623	0/0:27,0:26:72.23:0,72,1586	0/0:24,0:24:66.23:0,66,1481	0/0:26,0:26:78.27:0,78,1750	0/0:34,0:34:87.30:0,87,1938	0/0:24,0:24:66.23:0,66,1490	0/0:45,0:45:99:0,135,3029	0/0:41,0:40:99:0,117,2605	0/0:9,0:9:27.09:0,27,612
chr10	46144173	.	TTGTG	T	1823.41	PASS	AB=0.764;AC=17;AF=0.327;AN=52;BaseQRankSum=-1.683;DP=623;FS=0.000;HRun=0;HaplotypeScore=132.8128;InbreedingCoeff=0.6232;MQ=56.58;MQ0=13;MQRankSum=3.676;QD=8.29;ReadPosRankSum=3.958;VQSLOD=2.5526;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:20,15:36:23.91:374,24,0	0/0:7,0:10:2.84:0,3,52	./.	./.	0/0:10,0:12:9.03:0,9,162	0/1:8,1:19:22.41:57,0,22	0/1:11,1:18:30.44:30,0,42	0/0:35,0:33:24.07:0,24,421	1/1:10,7:18:24.07:357,24,0	0/0:32,0:31:46.34:0,46,774	0/0:14,0:16:12.04:0,12,206	1/1:15,12:27:21.54:311,22,0	1/1:10,9:18:14.83:235,15,0	0/0:16,0:24:24.08:0,24,414	0/0:14,0:32:39.60:0,40,699	0/0:17,0:28:18.27:0,18,310	0/1:28,1:28:36.39:36,0,1044	0/0:16,0:25:24.08:0,24,426	0/0:18,0:18:12.04:0,12,241	0/0:14,0:17:6.02:0,6,117	0/0:30,0:28:27.05:0,27,418	1/1:7,6:13:12.04:185,12,0	1/1:9,4:14:2.96:47,3,0	1/1:10,15:23:24.08:376,24,0	0/0:15,0:24:9.03:0,9,162	0/0:30,0:30:44.89:0,45,740	0/0:11,0:16:20.10:0,20,339	0/0:13,0:12:18.06:0,18,311
chr10	46144188	.	T	TGTGT	2725.18	PASS	AB=0.974;AC=27;AF=0.519;AN=52;BaseQRankSum=-7.114;DP=622;FS=6.550;HRun=0;HaplotypeScore=128.9390;InbreedingCoeff=0.4691;MQ=53.48;MQ0=18;MQRankSum=-0.854;QD=7.70;ReadPosRankSum=-1.039;VQSLOD=2.3166;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:38:26.95:0,27,237	1/1:12,0:11:3.22:12,3,0	./.	./.	1/1:12,0:11:1.22:9,1,0	0/0:21,0:21:12.01:0,12,112	0/0:17,0:17:18.02:0,18,167	1/1:29,0:26:2.49:6,2,0	0/0:13,0:13:23.85:0,24,219	0/1:25,0:24:46.95:286,0,47	1/1:12,0:12:8.24:148,8,0	0/0:26,0:25:20.89:0,21,195	0/0:16,0:15:14.57:0,15,139	1/1:25,0:25:17.80:361,18,0	1/1:32,0:32:28.69:472,29,0	1/1:27,0:27:12.38:266,12,0	0/0:36,0:34:54.14:0,54,735	1/1:26,0:26:10.56:164,11,0	1/1:16,0:16:6.68:40,7,0	1/1:15,0:15:2.74:12,3,0	0/1:31,0:29:1.46:194,0,1	0/0:20,0:19:11.99:0,12,106	0/0:14,0:14:2.69:0,3,28	0/0:28,0:26:23.96:0,24,209	1/1:22,0:22:8.24:148,8,0	0/1:29,4:33:8.36:262,0,8	0/1:20,0:20:28.53:334,0,29	0/1:16,0:14:13.79:188,0,14
chr10	46145645	.	GCA	G	19772.60	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=2.726;DP=770;FS=1.094;HRun=0;HaplotypeScore=97.4662;InbreedingCoeff=0.9633;MQ=68.70;MQ0=7;MQRankSum=-4.093;QD=29.12;ReadPosRankSum=3.675;VQSLOD=6.6353;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,40:44:87.28:1098,87,0	1/1:1,16:17:42.13:530,42,0	0/0:33,1:28:10.28:0,10,689	0/0:28,0:22:51.17:0,51,826	1/1:6,22:28:59.70:757,60,0	1/1:2,25:27:72.23:909,72,0	1/1:5,17:22:39.12:492,39,0	1/1:8,25:33:75.24:947,75,0	1/1:5,16:21:48.15:606,48,0	1/1:4,29:33:87.28:1098,87,0	1/1:4,13:17:36.11:454,36,0	1/1:6,22:28:66.21:833,66,0	1/1:3,15:18:45.14:568,45,0	1/1:4,15:19:42.13:530,42,0	1/1:3,39:42:99:1250,99,0	1/1:4,25:28:63.17:795,63,0	0/0:29,0:29:69.24:0,69,1147	1/1:3,17:20:48.15:606,48,0	1/1:6,22:28:69.17:841,69,0	1/1:6,35:41:90.29:1136,90,0	1/1:4,29:34:84.10:1036,84,0	1/1:3,23:26:63.20:795,63,0	1/1:5,22:27:63.20:795,63,0	1/1:4,32:36:84.14:1060,84,0	1/1:1,27:28:66.21:833,66,0	1/1:4,29:32:84.26:1047,84,0	1/1:1,22:21:51.16:644,51,0	1/1:1,3:3:9.03:114,9,0
chr10	46146753	.	A	ATG	61.49	PASS	AB=0.857;AC=7;AF=0.219;AN=32;BaseQRankSum=3.338;DP=120;FS=3.446;HRun=0;HaplotypeScore=58.6628;InbreedingCoeff=0.4219;MQ=44.76;MQ0=4;MQRankSum=-2.196;QD=2.80;ReadPosRankSum=0.927;VQSLOD=1.5819;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:7:0.76:0,1,6	0/0:5,0:5:2.74:0,3,12	0/0:2,0:1:1.25:0,1,3	./.	0/0:2,1:3:0:0,0,0	0/0:5,0:5:3.26:0,3,10	0/0:1,0:1:0:0,0,0	0/0:20,0:18:53.37:0,53,377	./.	./.	./.	./.	0/0:5,0:5:9.54:0,10,43	./.	./.	./.	0/0:26,0:25:26.52:0,27,213	0/1:5,1:4:3.73:28,0,4	1/1:4,0:4:5.96:43,6,0	1/1:6,0:6:3:25,3,0	./.	0/0:1,0:1:0:0,0,0	0/0:1,0:1:0:0,0,0	./.	./.	0/0:1,0:1:2.84:0,3,14	./.	1/1:2,4:6:8.90:64,9,0
chr10	46146791	.	ATG	A	889.66	PASS	AB=0.938;AC=23;AF=0.523;AN=44;BaseQRankSum=2.530;DP=205;FS=6.181;HRun=0;HaplotypeScore=56.8562;InbreedingCoeff=0.5002;MQ=41.36;MQ0=9;MQRankSum=-3.653;QD=7.06;ReadPosRankSum=-0.820;VQSLOD=2.1443;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:10,1:10:1.77:4,2,0	1/1:4,0:4:2.97:20,3,0	1/1:6,0:1:0.89:2,1,0	0/1:16,0:3:3.90:4,0,8	0/0:5,1:6:3.01:0,3,57	1/1:8,0:8:8.93:63,9,0	0/1:1,0:1:0:0,0,0	1/1:30,6:35:76.20:714,76,0	./.	0/0:6,0:6:18.06:0,18,325	0/0:6,0:6:12.04:0,12,229	1/1:9,0:9:2.94:18,3,0	1/1:6,0:6:2.94:18,3,0	0/0:2,0:2:6.02:0,6,100	./.	./.	0/0:18,0:17:5.87:0,6,36	0/0:8,0:6:5.05:0,5,63	1/1:6,0:6:17.78:117,18,0	./.	./.	0/1:2,0:2:0:0,0,0	0/1:7,0:7:0:0,0,0	./.	0/0:6,0:6:15.05:0,15,278	0/0:5,0:5:15.05:0,15,281	1/1:4,1:5:8.91:61,9,0	0/1:5,4:9:6.77:7,0,204
chr10	46146793	.	GTA	G	1622.32	PASS	AB=1.000;AC=17;AF=0.405;AN=42;BaseQRankSum=-0.818;DP=212;FS=6.152;HRun=0;HaplotypeScore=54.7929;InbreedingCoeff=0.6010;MQ=45.02;MQ0=9;MQRankSum=-4.187;QD=15.60;ReadPosRankSum=-0.033;VQSLOD=2.7554;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,8:10:1.74:3,2,0	1/1:1,3:4:3.01:44,3,0	0/0:6,0:1:2.74:0,3,12	0/1:18,0:4:6.14:7,0,6	0/0:5,0:5:3.01:0,3,57	1/1:0,8:8:9.02:137,9,0	./.	1/1:8,27:34:72.67:1019,73,0	./.	0/0:6,0:6:18.06:0,18,328	0/0:6,0:6:12.04:0,12,227	1/1:1,8:9:3.01:34,3,0	1/1:0,6:6:5.95:54,6,0	0/0:2,0:2:6.02:0,6,105	./.	./.	0/0:20,0:19:8.76:0,9,83	0/0:8,0:6:5.05:0,5,63	1/1:3,3:6:18.06:259,18,0	./.	./.	0/0:0,2:2:0:0,0,0	0/0:0,7:7:0:0,0,0	./.	0/0:6,0:6:15.05:0,15,287	0/0:5,0:5:15.05:0,15,281	1/1:4,3:7:15.05:209,15,0	0/0:9,0:9:9.73:0,10,220
chr10	46146811	.	G	GTA	2708.20	PASS	AB=1.000;AC=31;AF=0.705;AN=44;BaseQRankSum=-2.434;DP=263;FS=1.245;HRun=0;HaplotypeScore=69.6695;InbreedingCoeff=0.6111;MQ=46.76;MQ0=4;MQRankSum=-0.329;QD=17.36;ReadPosRankSum=1.023;VQSLOD=3.7094;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:10:1.77:3,2,0	1/1:0,6:6:3.01:51,3,0	0/0:10,0:2:2.60:0,3,10	0/0:20,0:7:4.65:0,5,18	1/1:6,1:10:3:27,3,0	0/0:11,0:11:9.03:0,9,114	./.	1/1:14,25:39:63.20:1036,63,0	0/1:4,0:4:0:0,0,0	1/1:2,0:9:24:212,24,0	1/1:4,0:10:12.01:108,12,0	0/0:9,0:9:3.01:0,3,39	0/0:9,0:9:5.85:0,6,62	1/1:0,0:4:6:54,6,0	1/1:2,7:9:6.02:93,6,0	./.	0/0:21,0:21:11.99:0,12,136	1/1:1,0:6:3:27,3,0	1/1:2,6:8:21.07:329,21,0	1/1:0,7:7:6.01:102,6,0	./.	./.	./.	./.	1/1:2,0:9:14.98:134,15,0	1/1:2,0:7:20.92:171,21,0	1/1:0,12:12:24.08:407,24,0	1/1:0,0:5:11.85:95,12,0
chr10	46146855	.	GTATATGTGTA	G	2044.23	PASS	AB=1.000;AC=27;AF=0.540;AN=50;BaseQRankSum=5.659;DP=340;FS=16.886;HRun=0;HaplotypeScore=122.2908;InbreedingCoeff=0.6548;MQ=47.00;MQ0=5;MQRankSum=-2.678;QD=13.02;ReadPosRankSum=0.039;VQSLOD=1.2298;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:11:6.01:62,6,0	0/0:9,0:9:14.75:0,15,337	0/1:14,0:3:0.03:0,0,1	0/0:18,0:3:3.01:0,3,60	1/1:3,13:16:2.57:24,3,0	1/1:14,0:14:6.02:93,6,0	1/1:1,0:1:3.01:32,3,0	0/0:35,0:34:51.12:0,51,1131	1/1:5,0:5:2.73:33,3,0	1/1:6,13:19:38.33:966,38,0	1/1:5,13:18:5.97:46,6,0	1/1:11,0:11:3.01:33,3,0	1/1:11,0:11:8.99:100,9,0	1/1:4,3:7:3.01:50,3,0	0/0:12,0:12:18.06:0,18,778	./.	0/0:19,0:19:42.14:0,42,1607	1/1:6,1:7:9.03:160,9,0	0/0:16,0:12:24.05:0,24,634	0/0:14,0:14:24.07:0,24,999	0/0:11,0:11:15.05:0,15,440	0/0:2,0:2:0:0,0,0	0/0:14,0:14:0.47:0,0,1	./.	1/1:6,6:12:2.86:26,3,0	1/1:6,5:11:24.07:586,24,0	0/0:20,0:20:45.15:0,45,1727	./.
chr10	46146875	.	ATATATGTG	A	2548.25	PASS	AB=0.952;AC=21;AF=0.404;AN=52;BaseQRankSum=2.211;DP=354;FS=2.251;HRun=0;HaplotypeScore=118.8061;InbreedingCoeff=0.2064;MQ=51.28;MQ0=4;MQRankSum=-3.381;QD=12.43;ReadPosRankSum=-1.228;VQSLOD=2.5840;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:9,1:9:9.03:244,9,0	0/0:10,0:10:16.16:0,16,516	0/0:11,0:3:0.46:0,0,1	0/0:15,0:2:3.01:0,3,60	0/1:17,0:17:19.42:19,0,32	1/1:3,10:13:6.02:117,6,0	1/1:2,0:2:6.02:156,6,0	0/1:47,0:46:99:681,0,715	1/1:4,1:5:5.75:165,6,0	0/1:19,0:19:68.52:467,0,69	0/1:19,0:19:33.95:34,0,63	1/1:8,3:11:5.94:157,6,0	1/1:6,3:9:15:317,15,0	0/1:6,0:6:6.44:6,0,8	0/0:9,0:9:21.07:0,21,805	0/0:11,0:10:11.62:0,12,101	0/0:21,0:21:54.19:0,54,1824	0/1:7,0:7:28.69:37,0,29	0/0:12,0:11:30.07:0,30,859	0/0:20,0:20:42.12:0,42,1250	0/0:12,0:12:18.06:0,18,562	0/0:1,1:2:0:0,0,0	0/1:3,9:12:0:0,0,0	./.	0/1:14,0:14:15.95:16,0,76	0/1:14,0:14:51.84:291,0,52	0/0:23,0:23:57.19:0,57,1852	./.
chr10	46146883	.	G	GTA	2092.06	PASS	AB=1.000;AC=14;AF=0.292;AN=48;BaseQRankSum=-5.512;DP=330;FS=20.723;HRun=0;HaplotypeScore=92.9081;InbreedingCoeff=0.6873;MQ=58.42;MQ0=3;MQRankSum=-1.232;QD=20.12;ReadPosRankSum=-4.775;VQSLOD=1.2661;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:6,3:8:12.04:195,12,0	0/0:8,0:8:18.02:0,18,227	0/0:8,0:4:3.01:0,3,37	0/1:13,0:4:5.95:6,0,9	0/0:15,0:15:2.82:0,3,38	./.	1/1:0,4:4:6.02:99,6,0	1/1:8,38:46:79.31:1598,79,0	1/1:1,2:3:6.02:99,6,0	0/0:17,0:17:47.68:0,48,442	0/0:17,0:17:11.99:0,12,124	1/1:7,1:8:9.01:121,9,0	1/1:7,2:9:1.90:128,2,0	0/0:6,0:6:6.02:0,6,76	0/0:9,0:9:24.06:0,24,289	0/0:9,0:8:15.05:0,15,189	0/0:23,0:23:51.16:0,51,641	0/0:5,0:5:15.01:0,15,171	0/0:13,0:12:27.07:0,27,317	0/0:19,0:19:45.06:0,45,509	0/0:13,0:13:21.05:0,21,252	./.	0/1:11,0:11:0:0,0,0	./.	0/0:12,0:12:12.04:0,12,151	0/0:12,0:12:35.85:0,36,360	0/0:23,0:24:38.95:0,39,468	./.
chr10	46149991	.	CAAAA	C	12385.92	PASS	AB=1.000;AC=51;AF=0.911;AN=56;BaseQRankSum=-2.956;DP=691;FS=0.000;HRun=15;HaplotypeScore=131.1673;InbreedingCoeff=0.7460;MQ=62.29;MQ0=11;MQRankSum=-1.396;QD=20.01;ReadPosRankSum=4.542;VQSLOD=3.1568;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,22:34:51.48:604,51,0	1/1:1,9:10:17.65:258,18,0	0/0:47,0:14:20.61:0,21,259	0/1:29,0:13:13.34:13,0,160	1/1:4,24:30:64.17:796,64,0	1/1:4,14:19:31.22:412,31,0	1/1:1,12:13:23.94:327,24,0	1/1:5,0:27:18.77:277,19,0	1/1:3,13:16:30.07:409,30,0	1/1:4,24:30:78.12:968,78,0	1/1:6,20:29:64.15:753,64,0	1/1:6,19:25:35.72:467,36,0	1/1:3,18:21:29.22:375,29,0	1/1:4,17:21:23.69:326,24,0	1/1:4,20:25:38.58:491,39,0	1/1:3,18:21:32.51:420,33,0	0/0:18,0:24:62.42:0,62,1160	1/1:5,26:33:44.32:627,44,0	1/1:3,0:19:42:283,42,0	1/1:2,0:35:80.17:654,80,0	1/1:5,0:16:26.86:213,27,0	1/1:5,16:23:57:704,57,0	1/1:2,22:24:35.24:476,35,0	1/1:3,16:20:38.13:496,38,0	1/1:4,16:21:21.40:538,21,0	1/1:4,27:33:82.34:1014,82,0	1/1:2,0:32:53.38:404,53,0	1/1:0,8:8:6.02:82,6,0
chr10	46152809	.	AC	A	3025.72	PASS	AB=0.739;AC=17;AF=0.304;AN=56;BaseQRankSum=15.208;DP=579;FS=4.751;HRun=1;HaplotypeScore=107.1359;InbreedingCoeff=0.6251;MQ=61.21;MQ0=5;MQRankSum=-0.546;QD=12.30;ReadPosRankSum=4.287;VQSLOD=2.5598;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:86.65:0,87,1042	0/0:6,0:6:18.06:0,18,272	0/1:20,0:7:16.08:16,0,21	0/0:16,0:8:19.87:0,20,252	0/1:9,16:26:15.78:342,0,16	0/0:25,0:25:67.29:0,67,962	0/1:13,1:14:1.88:2,0,389	0/0:25,0:25:48.31:0,48,973	0/0:11,0:11:26.73:0,27,347	1/1:2,17:27:34.59:461,35,0	0/1:7,6:20:50.13:181,0,50	0/0:16,0:16:45.20:0,45,497	0/0:12,0:12:34.13:0,34,404	1/1:4,11:15:16.56:288,17,0	0/0:21,0:21:60.19:0,60,906	1/1:6,12:20:24.74:315,25,0	0/0:34,0:34:99:0,102,1562	1/1:7,9:16:9.70:208,10,0	0/0:8,0:6:18.05:0,18,265	0/0:38,0:38:99:0,114,1759	0/0:11,0:11:30.10:0,30,479	0/0:10,0:9:20.58:0,21,234	0/0:22,0:22:62.89:0,63,754	0/0:10,0:10:26.81:0,27,360	1/1:8,20:29:49.54:490,50,0	0/1:6,19:33:3.30:466,0,3	0/0:37,0:37:99:0,111,1756	1/1:7,19:26:19.74:448,20,0
chr10	46152811	.	AAC	A	4257.32	PASS	AB=0.950;AC=20;AF=0.357;AN=56;BaseQRankSum=13.621;DP=595;FS=1.946;HRun=0;HaplotypeScore=116.5267;InbreedingCoeff=0.6218;MQ=61.17;MQ0=5;MQRankSum=-0.945;QD=14.73;ReadPosRankSum=1.605;VQSLOD=4.8348;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:33:99:99,0,289	0/0:7,0:7:21.03:0,21,259	0/1:21,0:8:19.85:20,0,80	0/0:15,0:7:18.35:0,18,184	1/1:12,15:27:9.58:443,10,0	0/0:25,0:25:22.83:0,23,262	0/1:16,0:16:91.59:92,0,126	0/0:26,0:26:67.56:0,68,758	0/0:14,0:14:21:0,21,135	1/1:11,16:27:47.92:553,48,0	0/1:15,5:20:18.98:244,0,19	0/0:16,0:16:6.23:0,6,140	0/0:12,0:12:3.81:0,4,130	1/1:6,9:15:22.83:348,23,0	0/0:22,0:22:62.18:0,62,879	1/1:8,12:20:31.61:397,32,0	0/0:34,0:34:96.25:0,96,1517	1/1:9,9:18:22.79:271,23,0	0/0:8,0:6:18.03:0,18,235	0/0:38,0:38:99:0,114,1595	0/0:11,0:11:30.10:0,30,519	0/0:10,0:9:10.14:0,10,87	0/0:21,0:21:14.49:0,14,207	0/0:10,0:10:6.32:0,6,127	1/1:11,19:30:47.14:584,47,0	1/1:21,14:35:27.75:649,28,0	0/0:37,0:37:99:0,111,1705	1/1:8,19:27:39.66:557,40,0
chr10	46152812	.	AC	A	4579.03	PASS	AB=0.965;AC=27;AF=0.482;AN=56;BaseQRankSum=12.281;DP=599;FS=5.637;HRun=1;HaplotypeScore=106.3297;InbreedingCoeff=0.3762;MQ=63.02;MQ0=5;MQRankSum=-0.553;QD=12.28;ReadPosRankSum=-0.434;VQSLOD=3.0906;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:32,1:33:29.82:207,0,30	0/0:8,0:8:24.02:0,24,261	0/0:23,0:10:7.77:0,8,122	0/0:16,0:8:21.60:0,22,194	1/1:25,2:27:42.41:429,42,0	0/1:24,0:24:22.54:73,0,23	0/1:15,1:16:16.31:110,0,16	0/0:27,0:27:20.87:0,21,569	0/1:14,0:14:20.38:27,0,20	1/1:27,0:27:65.92:535,66,0	1/1:19,1:20:24.09:280,24,0	0/1:15,1:16:5.82:61,0,6	0/1:11,1:12:11.82:46,0,12	1/1:14,1:15:31.54:303,32,0	0/0:22,0:22:57.94:0,58,756	1/1:20,0:20:41.49:352,41,0	0/0:32,0:32:96.27:0,96,1242	1/1:12,5:17:30.66:258,31,0	0/0:8,1:7:8.51:0,9,186	0/0:40,0:40:99:0,120,1407	0/0:12,0:12:30.08:0,30,408	0/1:9,1:9:11.85:31,0,12	0/1:20,0:20:15.36:77,0,15	0/1:10,0:10:7.16:7,0,36	1/1:29,1:30:72.23:565,72,0	1/1:30,5:35:78.41:663,78,0	0/0:37,0:37:99:0,111,1395	1/1:26,1:27:58.91:554,59,0
chr10	46153400	.	T	TAAAAC	33682.18	PASS	AB=0.625;AC=49;AF=0.875;AN=56;BaseQRankSum=-9.207;DP=674;FS=4.450;HRun=0;HaplotypeScore=110.7569;InbreedingCoeff=0.8226;MQ=69.80;MQ0=0;MQRankSum=-5.876;QD=56.14;ReadPosRankSum=2.950;VQSLOD=5.0473;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,23:31:64.97:1979,65,0	1/1:1,7:9:21.07:615,21,0	0/0:28,0:28:53.98:0,54,939	0/0:21,0:21:36.12:0,36,629	1/1:8,24:33:81.16:1972,81,0	1/1:3,14:17:42.14:1227,42,0	1/1:6,11:17:27.09:789,27,0	1/1:19,9:29:42.14:1101,42,0	1/1:4,12:16:42.14:1227,42,0	1/1:15,16:32:66.22:1797,66,0	1/1:5,19:27:60.20:1655,60,0	1/1:7,16:25:51.18:1492,51,0	1/1:6,15:21:51.17:1440,51,0	1/1:11,20:33:59.98:1677,60,0	1/1:4,16:21:48.16:1404,48,0	1/1:9,16:27:48.16:1404,48,0	0/0:24,0:24:48.16:0,48,918	0/1:6,9:15:34.06:625,0,34	1/1:15,17:29:54.18:1529,54,0	1/1:7,19:27:69.20:1840,69,0	1/1:4,8:12:15.05:439,15,0	1/1:5,17:22:42.14:1176,42,0	1/1:9,13:23:32.91:966,33,0	1/1:6,10:16:33.11:934,33,0	1/1:3,18:21:51.17:1444,51,0	1/1:11,28:40:93.22:2666,93,0	1/1:10,29:41:65.86:1931,66,0	1/1:8,4:12:12.04:352,12,0
chr10	46153685	.	C	CT	1761.16	PASS	AB=0.759;AC=16;AF=0.286;AN=56;BaseQRankSum=-0.985;DP=514;FS=0.472;HRun=11;HaplotypeScore=81.7275;InbreedingCoeff=0.4356;MQ=85.65;MQ0=5;MQRankSum=-2.622;QD=9.42;ReadPosRankSum=-0.377;VQSLOD=2.7424;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:11,11:23:19.07:324,0,19	0/0:7,0:8:13.98:0,14,97	0/1:56,1:25:45.03:45,0,149	0/0:56,1:33:49.26:0,49,263	0/0:16,0:16:26.78:0,27,204	0/1:10,12:23:59.48:335,0,59	1/1:4,5:9:17.98:166,18,0	0/0:32,0:32:49.78:0,50,377	1/1:3,6:9:15.03:152,15,0	0/0:27,0:29:69.76:0,70,516	0/0:19,0:21:40.77:0,41,301	0/1:10,8:18:13.19:229,0,13	1/1:3,8:11:9.79:267,10,0	0/0:4,0:4:5.97:0,6,46	0/1:11,0:11:0.63:1,0,138	0/0:7,0:7:20.92:0,21,163	0/0:22,0:22:53.29:0,53,404	0/0:11,0:11:20.89:0,21,163	0/0:25,0:25:53.73:0,54,415	0/0:21,0:21:44.78:0,45,346	0/0:10,0:11:31.86:0,32,230	1/1:3,5:8:15.01:144,15,0	1/1:1,12:13:6.84:251,7,0	0/1:1,2:3:17.05:24,0,17	0/0:15,0:15:35.83:0,36,276	0/0:19,0:19:46.35:0,46,336	0/0:13,0:13:2.47:0,2,200	0/0:10,0:11:22.92:0,23,168
chr10	46153740	.	CTGTG	C	1934.78	PASS	AB=0.721;AC=17;AF=0.304;AN=56;BaseQRankSum=7.473;DP=620;FS=0.590;HRun=0;HaplotypeScore=140.8717;InbreedingCoeff=0.7210;MQ=46.73;MQ0=36;MQRankSum=-6.146;QD=11.12;ReadPosRankSum=1.680;VQSLOD=2.9509;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,12:20:5.70:97,6,0	0/0:8,0:8:21.07:0,21,533	0/0:52,0:15:21.07:0,21,455	0/0:46,0:12:14.73:0,15,220	0/0:23,0:23:56.98:0,57,1383	1/1:4,11:20:21.05:341,21,0	0/1:9,4:13:43.04:43,0,78	0/1:37,11:35:99:657,0,543	1/1:3,3:8:8.98:147,9,0	0/0:46,0:41:99:0,111,2625	0/0:20,0:20:42.14:0,42,1065	1/1:2,9:17:20.99:316,21,0	1/1:3,7:12:21.03:314,21,0	0/0:7,0:7:21.07:0,21,507	0/0:10,0:10:18.02:0,18,457	0/0:18,0:18:54.19:0,54,1371	0/0:29,0:30:51.91:0,52,1654	0/0:14,0:14:36.93:0,37,750	0/0:26,0:23:53.87:0,54,1103	0/0:24,0:24:45.15:0,45,1106	0/0:34,1:35:84.02:0,84,2078	1/1:4,8:15:9.03:152,9,0	0/1:5,8:15:0.32:1,0,0	1/1:0,3:3:3.01:52,3,0	0/0:23,0:23:60.21:0,60,1515	0/0:25,0:23:60.21:0,60,1464	0/0:16,0:16:48.16:0,48,1212	0/0:19,0:20:47.95:0,48,1155
chr10	46153772	.	CTGTGTGTGTGTATCTGTGTG	C	2238.90	PASS	AB=1.000;AC=14;AF=0.250;AN=56;BaseQRankSum=8.876;DP=652;FS=9.815;HRun=0;HaplotypeScore=308.7904;InbreedingCoeff=0.6341;MQ=46.08;MQ0=46;MQRankSum=-8.341;QD=14.54;ReadPosRankSum=-2.383;VQSLOD=0.7794;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:0.91:0,1,2	0/0:11,0:11:30.10:0,30,1869	0/0:27,0:4:9.03:0,9,290	0/0:28,0:4:6.02:0,6,230	0/0:29,0:28:75.26:0,75,4749	1/1:23,2:25:14.84:476,15,0	0/1:27,0:27:99:216,0,128	0/1:35,0:24:99:406,0,262	1/1:9,1:8:2.92:156,3,0	0/0:49,0:39:99:0,102,5901	0/0:25,0:25:65.47:0,65,3665	1/1:15,2:16:9.03:355,9,0	1/1:14,1:14:24.06:501,24,0	0/0:7,0:7:21.07:0,21,1423	0/0:15,0:15:36.12:0,36,2155	0/0:20,0:20:57.20:0,57,4233	0/0:33,0:33:90.31:0,90,5789	0/0:15,0:15:39.13:0,39,1879	0/0:31,0:22:55.99:0,56,2939	0/0:23,0:23:57.20:0,57,3718	0/0:43,0:43:99:0,110,6588	1/1:14,2:16:5.79:264,6,0	0/0:16,2:18:0.22:0,0,1	1/1:9,0:9:2.80:31,3,0	0/0:25,0:24:60.21:0,60,4285	0/0:29,0:27:69.24:0,69,4087	0/0:22,0:22:57.20:0,57,3344	0/0:20,0:20:57.20:0,57,3319
chr10	46153786	.	CTGTGTG	C	2101.08	PASS	AB=0.572;AC=18;AF=0.321;AN=56;BaseQRankSum=9.879;DP=618;FS=6.997;HRun=0;HaplotypeScore=163.8988;InbreedingCoeff=0.7542;MQ=52.60;MQ0=42;MQRankSum=-7.312;QD=11.80;ReadPosRankSum=-2.078;VQSLOD=1.6931;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:1,26:28:0:0,0,0	0/0:10,0:10:30.07:0,30,868	0/0:26,0:7:17.80:0,18,402	0/0:27,0:9:8.79:0,9,262	0/0:30,0:29:71.48:0,71,2256	1/1:2,15:17:14.88:280,15,0	1/1:7,22:29:13.19:269,13,0	0/1:14,21:27:15.53:864,0,16	1/1:3,5:7:3.01:60,3,0	0/0:41,0:33:81.25:0,81,2258	0/0:22,0:23:62.44:0,62,1858	1/1:3,8:10:8.82:140,9,0	1/1:2,8:9:21.07:460,21,0	0/0:8,0:8:24.05:0,24,626	0/0:14,0:14:36.08:0,36,1229	0/0:20,0:20:60.21:0,60,1898	0/0:34,0:34:90.31:0,90,2879	0/0:14,0:15:32.34:0,32,865	0/0:28,0:23:64.07:0,64,1802	0/0:25,0:25:57.18:0,57,1801	0/0:44,0:44:99:0,114,3267	1/1:3,13:16:5.77:72,6,0	1/1:8,7:15:2.80:68,3,0	1/1:2,7:9:2.78:66,3,0	0/0:24,0:23:60.21:0,60,2017	0/0:26,0:24:69.24:0,69,2317	0/0:22,0:23:60.19:0,60,1795	0/0:20,0:20:51.13:0,51,1566
chr10	46154673	.	CAG	C	7847.38	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=3.463;DP=784;FS=34.715;HRun=0;HaplotypeScore=117.2352;InbreedingCoeff=0.9490;MQ=82.80;MQ0=5;MQRankSum=-2.008;QD=27.63;ReadPosRankSum=2.130;VQSLOD=3.6915;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,38:43:99:1293,105,0	0/0:15,0:15:36.12:0,36,585	0/0:45,0:35:50.43:0,50,637	0/0:52,1:37:20.33:0,20,622	0/0:28,1:29:44.32:0,44,1207	1/1:5,17:23:44.97:531,45,0	1/1:2,27:29:72.23:887,72,0	1/1:10,16:26:3.10:493,3,0	1/1:3,22:25:63.20:776,63,0	0/0:28,0:28:63.21:0,63,1001	0/0:18,0:18:45.15:0,45,731	1/1:2,34:36:87.27:1071,87,0	1/1:5,20:26:63.03:753,63,0	0/0:23,1:24:17.25:0,17,790	0/0:31,0:31:81.28:0,81,1313	0/0:34,1:35:44.33:0,44,1206	0/0:30,1:31:38.30:0,38,1112	0/0:24,0:24:34.32:0,34,829	0/0:21,0:21:45.15:0,45,734	0/0:15,0:15:36.11:0,36,563	0/0:33,0:33:78.27:0,78,1256	1/1:5,22:27:50.43:627,50,0	1/1:3,19:22:54.17:665,54,0	1/1:4,22:27:63.03:753,63,0	0/0:29,2:31:4.37:0,4,1068	0/0:31,0:31:66.23:0,66,1074	0/0:27,1:28:41.32:0,41,1136	0/0:7,0:7:15.05:0,15,236
chr10	46157210	.	TA	T	9283.90	PASS	AB=0.870;AC=51;AF=0.911;AN=56;BaseQRankSum=0.570;DP=483;FS=0.000;HRun=10;HaplotypeScore=48.1648;InbreedingCoeff=0.7161;MQ=66.24;MQ0=1;MQRankSum=-2.368;QD=20.14;ReadPosRankSum=2.672;VQSLOD=5.5519;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,16:20:44.98:391,45,0	1/1:0,4:4:12:104,12,0	0/0:10,0:10:18.03:0,18,186	0/0:12,0:7:14.40:0,14,134	1/1:3,18:22:52.98:442,53,0	1/1:1,12:13:15.29:266,15,0	1/1:1,11:12:29.99:260,30,0	1/1:7,37:44:99:932,111,0	1/1:0,15:15:41.99:365,42,0	1/1:2,17:19:47.96:417,48,0	1/1:2,11:12:26.99:234,27,0	1/1:5,18:23:50.96:443,51,0	1/1:2,12:14:29.99:260,30,0	1/1:3,16:19:35.99:312,36,0	1/1:1,16:17:41.99:365,42,0	1/1:3,16:19:41.99:365,42,0	0/1:17,3:20:23.99:24,0,443	1/1:2,21:23:56.82:495,57,0	1/1:2,11:13:32.95:278,33,0	1/1:2,22:24:65.95:566,66,0	1/1:1,10:11:23.99:208,24,0	1/1:0,3:3:5.99:52,6,0	1/1:2,12:14:35.99:312,36,0	1/1:1,8:9:20.99:182,21,0	1/1:0,22:22:62.99:547,63,0	1/1:3,18:21:53.99:469,54,0	1/1:4,24:29:65.02:553,65,0	1/1:0,18:18:50.99:443,51,0
chr10	46159369	.	TTAAATATATATATATATA	T	1111.86	PASS	AB=1.000;AC=17;AF=0.340;AN=50;BaseQRankSum=1.853;DP=145;FS=7.931;HRun=0;HaplotypeScore=69.1145;InbreedingCoeff=0.5416;MQ=72.23;MQ0=4;MQRankSum=0.610;QD=17.65;ReadPosRankSum=0.641;VQSLOD=0.5346;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:11,2:13:20.02:460,20,0	0/0:1,0:1:3:0,3,28	0/0:5,0:4:5.94:0,6,44	0/0:13,0:4:5.73:0,6,77	./.	1/1:1,4:5:6.02:309,6,0	1/1:1,0:1:3.01:38,3,0	0/1:31,0:31:99:241,0,293	./.	0/0:7,0:7:21.01:0,21,196	./.	1/1:3,0:3:5.99:50,6,0	1/1:2,0:2:5.99:49,6,0	0/0:5,0:5:15:0,15,134	0/0:1,0:1:3:0,3,28	0/0:2,0:2:6.01:0,6,56	0/0:13,0:12:30:0,30,1061	0/0:7,0:7:12.02:0,12,347	0/0:3,0:3:8.98:0,9,78	0/0:4,0:4:6.01:0,6,78	0/0:3,0:3:9:0,9,81	1/1:4,0:4:5.99:50,6,0	1/1:2,0:2:5.99:50,6,0	1/1:2,0:2:3:25,3,0	0/0:2,0:2:3.01:0,3,199	0/0:2,0:2:3:0,3,28	0/0:5,0:5:12:0,12,105	0/0:4,0:4:12.01:0,12,292
chr10	46159372	.	AATATATATATATATATAT	A	1060.06	PASS	AB=0.615;AC=9;AF=0.409;AN=22;BaseQRankSum=3.294;DP=126;FS=3.145;HRun=0;HaplotypeScore=65.2733;InbreedingCoeff=0.3980;MQ=67.29;MQ0=4;MQRankSum=-2.125;QD=20.79;ReadPosRankSum=-2.255;VQSLOD=0.5953;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:12,0:12:5.59:267,6,0	./.	1/1:2,0:1:0.47:1,0,0	0/0:14,0:4:2.96:0,3,52	./.	1/1:4,0:4:6.02:272,6,0	1/1:1,0:1:2.97:20,3,0	0/1:12,20:32:1.79:594,0,2	./.	./.	./.	./.	./.	./.	./.	./.	0/0:10,0:10:18.04:0,18,867	0/0:3,0:7:6.02:0,6,262	./.	0/0:2,0:2:3:0,3,25	./.	./.	./.	./.	0/0:0,0:1:3.01:0,3,193	./.	./.	0/0:5,0:4:3.01:0,3,192
chr10	46159426	.	TTA	T	514.12	PASS	AC=18;AF=0.360;AN=50;BaseQRankSum=0.428;DP=174;FS=5.633;HRun=0;HaplotypeScore=37.5727;InbreedingCoeff=0.6959;MQ=81.91;MQ0=3;MQRankSum=3.398;QD=15.12;ReadPosRankSum=3.418;VQSLOD=2.7237;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:38.85:0,39,477	./.	0/0:31,0:11:13.85:0,14,178	0/0:20,0:8:2.01:0,2,51	1/1:0,4:5:11.73:110,12,0	0/0:3,0:3:8.98:0,9,119	0/0:2,0:2:6.01:0,6,76	0/0:17,0:17:47.82:0,48,402	0/0:2,0:2:5.99:0,6,50	1/1:0,2:2:5.95:44,6,0	1/1:1,5:6:14.89:156,15,0	0/0:7,0:7:21.03:0,21,265	0/0:1,0:1:3.01:0,3,37	1/1:0,2:2:3.01:38,3,0	0/0:4,0:4:11.76:0,12,72	1/1:0,3:3:6.02:78,6,0	0/0:11,0:9:24.08:0,24,376	1/1:0,6:6:2.29:38,2,0	0/0:3,0:3:8.94:0,9,79	0/0:8,0:8:17.65:0,18,107	./.	0/0:3,0:3:9:0,9,101	0/0:7,0:7:19.25:0,19,204	./.	1/1:2,0:2:3:27,3,0	1/1:0,4:4:8.31:114,8,0	0/0:7,0:6:17.69:0,18,113	1/1:0,4:4:6.02:77,6,0
chr10	46159435	.	G	GTCT	1419.89	PASS	AB=1.000;AC=11;AF=0.212;AN=52;BaseQRankSum=-1.333;DP=197;FS=3.837;HRun=0;HaplotypeScore=40.5497;InbreedingCoeff=0.6807;MQ=82.22;MQ0=1;MQRankSum=-6.290;QD=30.21;ReadPosRankSum=-0.179;VQSLOD=3.3187;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:42.14:0,42,694	./.	0/0:19,0:10:23.94:0,24,322	0/1:14,0:8:25.01:25,0,159	0/0:6,0:6:15.05:0,15,250	0/0:4,0:4:12.04:0,12,193	0/0:2,0:2:6.02:0,6,99	0/0:20,0:20:54.13:0,54,847	0/0:4,0:4:12.04:0,12,200	0/0:5,0:5:12.04:0,12,200	0/0:7,0:7:18.05:0,18,300	0/0:8,0:8:24.08:0,24,400	0/0:4,0:4:12.03:0,12,174	0/0:3,0:3:6.02:0,6,97	1/1:2,4:6:12.04:270,12,0	0/0:5,0:4:12.04:0,12,200	0/0:12,0:12:36.12:0,36,599	0/0:4,0:4:3.01:0,3,50	1/1:2,2:4:9.03:203,9,0	1/1:2,8:12:24.08:542,24,0	1/1:1,0:1:3.01:68,3,0	0/0:3,0:3:9.03:0,9,150	0/0:8,0:8:24.08:0,24,388	./.	0/0:3,0:3:9.03:0,9,150	0/0:3,0:3:9.03:0,9,150	1/1:3,6:9:21.07:470,21,0	0/0:14,0:14:39.13:0,39,649
chr10	46159623	.	TATAC	T	4408.88	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=4.670;DP=506;FS=1.791;HRun=0;HaplotypeScore=99.5527;InbreedingCoeff=0.8731;MQ=60.82;MQ0=4;MQRankSum=1.417;QD=25.48;ReadPosRankSum=2.271;VQSLOD=4.4906;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:36.12:0,36,810	0/0:8,0:8:15.05:0,15,353	0/0:21,0:13:1.25:0,1,3	0/0:17,0:11:1.25:0,1,3	1/1:1,0:11:11.97:90,12,0	1/1:4,7:11:12.04:187,12,0	1/1:8,5:13:12.04:187,12,0	0/0:37,0:34:19.31:0,19,355	0/0:19,0:19:42.14:0,42,986	1/1:1,11:12:36.12:559,36,0	1/1:4,8:12:12.04:186,12,0	0/0:25,0:25:60.21:0,60,1363	0/0:5,0:18:39.13:0,39,672	1/1:6,9:16:33.11:514,33,0	0/0:27,0:27:48.16:0,48,1109	1/1:5,26:31:66.22:1009,66,0	0/0:17,0:17:30.10:0,30,704	1/1:11,8:19:18.06:280,18,0	0/0:9,0:10:6.02:0,6,105	0/0:7,0:16:27.09:0,27,470	0/0:8,0:23:35.97:0,36,628	0/0:16,0:16:33.11:0,33,760	0/0:10,0:10:15.05:0,15,351	0/0:7,0:7:6.02:0,6,113	1/1:3,15:18:39.13:607,39,0	1/1:6,17:23:51.14:744,51,0	0/0:7,0:28:51.17:0,51,915	1/1:3,3:5:3.01:47,3,0
chr10	46160023	.	C	CCAGGGCTA	45399.03	PASS	AB=0.684;AC=37;AF=0.661;AN=56;BaseQRankSum=-10.610;DP=730;FS=1.697;HRun=0;HaplotypeScore=172.1217;InbreedingCoeff=0.9199;MQ=54.20;MQ0=0;MQRankSum=-19.965;QD=95.38;ReadPosRankSum=0.918;VQSLOD=5.5547;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:16,22:43:84.16:3250,84,0	0/0:14,0:14:39.13:0,39,1104	0/0:24,0:23:57.17:0,57,1403	0/0:29,0:29:70.21:0,70,1890	1/1:4,20:26:42.14:1853,42,0	1/1:4,13:17:48.12:1910,48,0	1/1:3,8:12:30.10:1271,30,0	1/1:25,12:36:84.24:3411,84,0	1/1:7,17:25:66.10:2470,66,0	1/1:10,12:22:57.19:2152,57,0	1/1:3,21:25:63.17:2667,63,0	1/1:9,23:37:90.31:3665,90,0	1/1:13,20:35:96.29:3741,96,0	1/1:2,20:23:63.22:2710,63,0	0/0:45,0:45:99:0,126,3304	1/1:10,22:35:87.18:3384,87,0	0/0:36,0:36:99:0,102,2766	0/1:7,6:13:51.73:1207,0,52	0/0:21,0:21:60.21:0,60,1698	0/0:27,0:27:78.27:0,78,2155	0/0:26,0:26:75.23:0,75,1928	1/1:8,14:23:42.10:1664,42,0	1/1:1,13:16:39.13:1722,39,0	1/1:10,12:24:39.86:1705,40,0	1/1:7,12:22:45.06:1760,45,0	1/1:5,26:31:93.32:3939,93,0	0/0:32,0:32:93.32:0,93,2582	1/1:2,6:8:24.06:921,24,0
chr10	46161303	.	TA	T	1523.02	PASS	AB=0.756;AC=28;AF=0.500;AN=56;BaseQRankSum=2.358;DP=673;FS=16.705;HRun=16;HaplotypeScore=94.8111;InbreedingCoeff=0.5422;MQ=77.12;MQ0=2;MQRankSum=-1.305;QD=3.88;ReadPosRankSum=5.714;VQSLOD=-0.3836;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,7:42:5.37:0,5,430	1/1:3,1:9:8.97:35,9,0	0/0:18,0:17:11.02:0,11,84	0/1:20,0:15:8.12:8,0,40	0/1:25,16:43:37.33:172,0,37	0/0:8,2:25:7.78:0,8,207	0/0:7,0:19:34.67:0,35,218	0/0:11,0:40:64.08:0,64,334	0/0:13,0:23:23.04:0,23,135	1/1:12,18:31:21.24:241,21,0	1/1:5,11:18:13.90:129,14,0	0/0:6,1:19:17.76:0,18,130	0/0:11,0:24:29.45:0,29,210	1/1:8,9:20:20.66:107,21,0	1/1:7,0:22:24.28:70,24,0	0/1:10,14:25:52.49:157,0,52	0/1:25,4:29:18.20:18,0,280	1/1:7,15:24:30.28:173,30,0	1/1:14,1:22:16.30:56,16,0	1/1:7,2:33:44.80:150,45,0	1/1:4,0:19:24.08:70,24,0	0/0:6,0:17:31.81:0,32,183	0/0:11,0:26:23.65:0,24,143	0/0:21,0:26:61.58:0,62,409	0/1:10,10:20:61.44:93,0,61	1/1:4,13:19:19.28:113,19,0	1/1:6,0:28:26.38:76,26,0	0/1:5,5:11:8.47:61,0,8
chr10	46162089	.	GA	G	263.49	PASS	AB=0.903;AC=4;AF=0.071;AN=56;BaseQRankSum=5.838;DP=702;FS=7.981;HRun=11;HaplotypeScore=78.4584;InbreedingCoeff=0.5035;MQ=75.48;MQ0=0;MQRankSum=0.035;QD=3.51;ReadPosRankSum=-1.608;VQSLOD=-0.0725;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:27:65.98:0,66,673	0/0:10,0:11:32.85:0,33,301	0/0:27,2:29:9.24:0,9,250	0/0:19,0:18:25.89:0,26,266	0/0:34,1:36:32.51:0,33,715	0/1:17,2:21:1.57:2,0,330	0/0:16,1:17:23.47:0,23,446	1/1:9,18:29:22.82:352,23,0	0/0:25,0:25:47.16:0,47,597	0/0:33,2:35:37.89:0,38,759	0/0:25,0:25:54.13:0,54,566	0/0:23,1:24:30.64:0,31,477	0/0:26,2:28:38.47:0,38,578	0/0:22,0:22:26.79:0,27,428	0/0:38,3:42:58.65:0,59,953	0/0:36,1:38:74.32:0,74,933	0/0:24,1:25:47.60:0,48,682	0/0:15,0:15:36.04:0,36,362	0/0:21,1:22:26.82:0,27,468	0/0:24,1:26:40.43:0,40,648	0/0:23,0:23:59.99:0,60,590	0/0:26,0:26:42.50:0,42,448	0/0:26,0:26:60.09:0,60,604	0/0:23,2:25:22.87:0,23,625	0/0:19,0:19:51.10:0,51,531	0/1:22,3:25:13.74:14,0,447	0/0:31,1:35:53.19:0,53,694	0/0:6,0:6:13.80:0,14,108
chr10	46162330	.	A	AC	8499.98	PASS	AC=20;AF=0.385;AN=52;BaseQRankSum=16.982;DP=715;FS=1.466;HRun=2;HaplotypeScore=84.1471;InbreedingCoeff=0.9729;MQ=50.14;MQ0=48;MQRankSum=-0.245;QD=31.14;ReadPosRankSum=-0.449;VQSLOD=4.3355;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,33:34:72.20:1010,72,0	0/0:5,0:5:12.04:0,12,149	./.	./.	0/0:28,0:27:63.16:0,63,765	1/1:1,20:20:48.16:690,48,0	1/1:7,26:27:57.19:819,57,0	1/1:8,25:30:72.24:1031,72,0	1/1:1,27:27:69.23:991,69,0	0/0:30,0:30:84.26:0,84,1041	0/0:21,0:20:54.17:0,54,669	1/1:0,29:29:72.24:1031,72,0	1/1:1,31:31:75.25:1078,75,0	0/0:27,0:24:66.21:0,66,817	0/0:39,0:39:99:0,111,1375	0/0:25,0:22:51.14:0,51,610	0/0:45,0:39:84.25:0,84,1027	0/0:28,0:27:57.13:0,57,688	0/0:20,0:19:54.12:0,54,640	0/0:27,0:26:66.21:0,66,818	0/0:19,0:14:15.05:0,15,186	1/1:1,20:19:51.13:704,51,0	1/1:2,17:17:45.15:646,45,0	1/1:5,15:20:4.95:500,5,0	0/0:22,0:21:60.19:0,60,743	0/0:25,0:24:72.18:0,72,875	0/0:39,0:37:96.30:0,96,1189	0/0:16,0:11:30.08:0,30,360
chr10	46163533	.	AT	A	10841.32	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-2.945;DP=564;FS=20.720;HRun=10;HaplotypeScore=78.4099;InbreedingCoeff=0.9464;MQ=66.44;MQ0=0;MQRankSum=-3.618;QD=21.99;ReadPosRankSum=4.752;VQSLOD=3.9009;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,29:37:56.79:721,57,0	1/1:4,7:11:29.99:260,30,0	0/0:24,0:19:19.57:0,20,370	0/0:16,0:9:7.81:0,8,104	1/1:4,20:24:59.97:521,60,0	1/1:3,14:17:47.99:417,48,0	1/1:5,14:19:53.92:458,54,0	1/1:9,13:22:38.96:333,39,0	1/1:5,10:15:38.96:335,39,0	1/1:6,17:23:59.97:517,60,0	1/1:5,12:17:32.33:390,32,0	1/1:7,9:16:35.98:312,36,0	1/1:3,12:15:38.98:338,39,0	1/1:3,18:21:56.98:494,57,0	1/1:2,17:19:50.99:443,51,0	1/1:7,7:14:8.59:231,9,0	0/0:28,1:29:73.08:0,73,796	1/1:3,9:11:20.98:182,21,0	1/1:7,12:20:50:418,50,0	1/1:5,16:21:53.98:468,54,0	1/1:5,10:15:35.98:309,36,0	1/1:2,16:18:53.99:468,54,0	1/1:5,17:22:29.76:480,30,0	1/1:1,13:14:38.99:339,39,0	1/1:3,21:24:38.94:566,39,0	1/1:10,25:35:95.96:830,96,0	1/1:6,20:26:68.95:595,69,0	1/1:1,15:16:47.99:417,48,0
chr10	46163594	.	AG	A	14262.48	PASS	AC=52;AF=0.963;AN=54;BaseQRankSum=-1.821;DP=503;FS=7.628;HRun=4;HaplotypeScore=90.1342;InbreedingCoeff=0.7079;MQ=49.72;MQ0=6;MQRankSum=0.359;QD=28.99;ReadPosRankSum=1.885;VQSLOD=4.5164;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,32:34:81.25:969,81,0	1/1:0,14:14:36.10:432,36,0	0/0:6,0:3:1.25:0,1,3	./.	1/1:2,28:30:63.02:727,63,0	1/1:2,18:20:42.13:503,42,0	1/1:3,11:14:27.04:306,27,0	1/1:2,21:22:24.17:681,24,0	1/1:2,9:11:24.05:272,24,0	1/1:4,22:25:30.23:785,30,0	1/1:1,11:12:27.08:321,27,0	1/1:1,20:21:57.17:683,57,0	1/1:2,10:12:33.07:381,33,0	1/1:1,15:16:42.13:496,42,0	1/1:2,12:14:33.09:381,33,0	1/1:0,12:12:30.09:358,30,0	1/1:0,39:39:99:1332,111,0	1/1:2,14:15:33.10:396,33,0	1/1:4,11:12:28.65:356,29,0	1/1:2,14:16:42.13:503,42,0	1/1:1,18:18:42.08:502,42,0	1/1:3,18:21:57.16:669,57,0	1/1:1,16:16:36.11:421,36,0	1/1:3,18:21:60.15:695,60,0	1/1:2,17:17:42.13:504,42,0	1/1:3,24:27:75.21:886,75,0	1/1:2,13:14:36.09:418,36,0	1/1:1,7:8:24.07:288,24,0
chr10	46164356	.	TCCC	T	4261.63	PASS	AB=0.840;AC=35;AF=0.625;AN=56;BaseQRankSum=1.159;DP=405;FS=25.507;HRun=14;HaplotypeScore=73.4477;InbreedingCoeff=0.5007;MQ=79.74;MQ0=1;MQRankSum=-0.461;QD=13.79;ReadPosRankSum=4.947;VQSLOD=1.5930;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,11:21:29.83:316,30,0	1/1:1,0:7:14.70:91,15,0	0/0:19,0:17:20.17:0,20,256	0/1:19,0:17:11.64:12,0,130	0/0:10,0:15:13.19:0,13,95	1/1:1,8:9:18.04:210,18,0	1/1:8,17:26:34.26:561,34,0	0/1:12,2:15:18.15:44,0,18	1/1:4,7:13:13.43:140,13,0	0/1:7,0:11:23.17:23,0,32	0/0:8,0:9:8.99:0,9,74	1/1:4,15:20:45.02:509,45,0	1/1:0,8:9:17.99:193,18,0	0/0:11,1:12:1.85:0,2,24	1/1:1,0:22:55.86:339,56,0	0/1:8,2:19:25.96:52,0,26	0/0:5,0:11:19.12:0,19,214	0/0:2,0:4:2.49:0,2,6	1/1:7,7:14:20.91:227,21,0	1/1:11,3:14:2.76:35,3,0	1/1:19,8:28:36.34:413,36,0	1/1:7,6:13:8.92:101,9,0	1/1:3,4:8:11.89:120,12,0	1/1:0,15:15:36.11:421,36,0	0/0:6,0:9:11.99:0,12,102	0/1:8,0:8:16.16:16,0,43	1/1:3,14:18:38.99:439,39,0	0/0:15,0:15:17.99:0,18,182
chr10	46166305	.	TCTC	T	9062.14	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=16.182;DP=751;FS=3.075;HRun=0;HaplotypeScore=117.1049;InbreedingCoeff=0.9996;MQ=81.07;MQ0=0;MQRankSum=-6.110;QD=39.75;ReadPosRankSum=3.167;VQSLOD=6.0365;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,120,2695	0/0:15,0:15:45.15:0,45,991	0/0:21,0:21:62.85:0,63,1232	0/0:22,0:22:57.20:0,57,1214	1/1:0,31:31:47.99:654,48,0	0/0:21,0:21:63.21:0,63,1342	0/0:27,0:27:78.27:0,78,1765	0/0:36,0:36:99:0,102,2231	0/0:22,0:22:66.23:0,66,1496	1/1:2,32:34:93.29:1499,93,0	1/1:1,10:11:24.08:400,24,0	0/0:27,0:27:81.28:0,81,1833	0/0:30,0:30:87.30:0,87,1913	1/1:0,27:27:75.26:1234,75,0	0/0:33,0:33:90.31:0,90,2008	1/1:1,37:38:99:1542,105,0	0/0:38,0:38:99:0,114,2577	1/1:1,23:24:57.15:920,57,0	0/0:25,0:25:60.21:0,60,1359	0/0:29,0:29:84.29:0,84,1875	0/0:39,0:39:99:0,117,2598	0/0:31,0:31:90.31:0,90,2020	0/0:17,0:17:48.16:0,48,1088	0/0:21,0:21:60.21:0,60,1360	1/1:1,25:26:66.18:1068,66,0	1/1:1,25:26:75.26:1246,75,0	0/0:28,0:27:78.27:0,78,1763	1/1:0,11:11:30.10:500,30,0
chr10	46167301	.	T	TA	8848.70	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-16.996;DP=752;FS=0.300;HRun=1;HaplotypeScore=70.3792;InbreedingCoeff=0.9993;MQ=81.02;MQ0=0;MQRankSum=-2.396;QD=38.31;ReadPosRankSum=4.199;VQSLOD=5.3702;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,32:34:69.23:1034,69,0	0/0:12,0:12:36.12:0,36,467	0/0:30,1:29:78.24:0,78,984	0/0:28,0:27:60.95:0,61,778	0/0:43,0:43:99:0,123,1569	1/1:0,15:15:39.13:584,39,0	1/1:0,25:25:66.22:989,66,0	0/0:38,0:38:99:0,108,1333	1/1:2,22:24:57.19:854,57,0	0/0:32,0:32:96.31:0,96,1235	0/0:7,0:7:21.07:0,21,272	1/1:1,29:30:84.28:1252,84,0	1/1:1,27:28:66.22:988,66,0	0/0:21,0:21:63.19:0,63,802	0/0:27,0:27:81.21:0,81,995	0/0:35,0:35:99:0,102,1310	0/0:26,0:26:78.25:0,78,1012	0/0:20,0:20:57.19:0,57,740	0/0:18,0:18:54.18:0,54,700	0/0:44,0:44:99:0,123,1596	0/0:34,0:34:99:0,102,1323	1/1:0,31:31:87.29:1304,87,0	1/1:0,24:24:63.21:944,63,0	1/1:0,20:20:60.20:899,60,0	0/0:24,0:24:72.21:0,72,919	0/0:28,0:28:84.27:0,84,1090	0/0:34,0:34:99:0,102,1290	0/0:19,0:19:57.19:0,57,739
chr10	46168041	.	CT	C	1614.07	PASS	AB=0.882;AC=19;AF=0.339;AN=56;BaseQRankSum=0.423;DP=670;FS=16.027;HRun=15;HaplotypeScore=157.3139;InbreedingCoeff=0.8885;MQ=59.90;MQ0=2;MQRankSum=-4.367;QD=8.32;ReadPosRankSum=4.179;VQSLOD=1.0394;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,16:27:21.73:255,22,0	0/0:7,0:9:13.67:0,14,79	0/0:22,0:13:7.83:0,8,64	0/1:13,1:12:2.07:2,0,113	0/0:23,1:32:18.75:0,19,178	1/1:8,19:26:52.14:332,52,0	1/1:11,10:21:11.97:204,12,0	0/0:32,1:30:25.69:0,26,339	1/1:7,13:20:19.33:211,19,0	0/0:25,0:34:56.03:0,56,370	0/0:13,0:20:34.52:0,35,211	1/1:10,7:17:28.87:178,29,0	1/1:7,11:19:40.39:254,40,0	0/0:16,0:23:39.40:0,39,215	0/0:22,0:28:37.82:0,38,210	0/0:17,0:31:69.53:0,70,421	0/0:27,3:30:11.17:0,11,457	0/0:11,0:17:28.98:0,29,177	0/0:13,0:20:39.34:0,39,227	0/0:20,0:28:61.56:0,62,362	0/0:17,0:23:36.43:0,36,228	1/1:9,7:16:23.44:152,23,0	1/1:11,11:22:8.80:182,9,0	1/1:3,5:10:9.91:50,10,0	0/0:32,1:44:75.29:0,75,562	0/0:24,0:28:45.65:0,46,289	0/0:25,0:34:62.50:0,63,355	0/0:12,0:14:5.72:0,6,29
chr10	46168062	.	T	TTA	19804.23	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=0.218;DP=640;FS=15.048;HRun=0;HaplotypeScore=124.8341;InbreedingCoeff=0.9754;MQ=57.33;MQ0=2;MQRankSum=-4.731;QD=34.93;ReadPosRankSum=0.336;VQSLOD=5.8133;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,21:25:54:860,54,0	1/1:1,6:8:21:334,21,0	0/0:21,0:15:38.86:0,39,463	0/0:19,0:17:40.41:0,40,504	1/1:5,11:16:30.01:436,30,0	1/1:4,22:25:71.16:1112,71,0	1/1:8,14:24:60.04:959,60,0	1/1:4,17:21:53.99:779,54,0	1/1:4,21:25:58.90:867,59,0	1/1:10,22:33:81.07:1350,81,0	1/1:3,18:21:51.15:834,51,0	1/1:5,14:19:40.46:625,40,0	1/1:8,12:22:48.92:645,49,0	1/1:4,16:20:48.63:642,49,0	1/1:5,25:31:57.95:998,58,0	1/1:7,18:25:62.04:1047,62,0	0/0:33,0:33:96.28:0,96,1403	1/1:6,14:20:41.74:683,42,0	1/1:9,8:16:34.95:499,35,0	1/1:6,16:22:44.70:771,45,0	1/1:7,10:17:12.95:475,13,0	1/1:5,12:18:47.70:685,48,0	1/1:5,21:27:66.17:1075,66,0	1/1:3,9:12:23.97:317,24,0	1/1:13,22:37:72.10:1166,72,0	1/1:4,27:31:43.42:1249,43,0	1/1:11,21:33:65.07:1140,65,0	1/1:3,8:11:11.06:255,11,0
chr10	46169142	.	GC	G	1080.14	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-0.849;DP=471;FS=5.732;HRun=2;HaplotypeScore=64.2136;InbreedingCoeff=0.8825;MQ=84.83;MQ0=0;MQRankSum=-1.930;QD=34.84;ReadPosRankSum=-3.001;VQSLOD=2.6661;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:39.13:0,39,578	0/0:7,0:7:21.07:0,21,312	0/0:16,0:15:39.11:0,39,536	0/0:19,0:19:51.14:0,51,739	0/0:26,0:26:69.22:0,69,1012	0/0:20,0:20:48.16:0,48,718	0/0:11,0:11:30.09:0,30,429	1/1:2,29:31:93.27:1175,93,0	0/0:5,0:5:9.03:0,9,135	0/0:11,0:11:33.05:0,33,434	0/0:26,0:26:78.26:0,78,1151	0/0:11,0:11:30.10:0,30,447	0/0:11,0:11:33.11:0,33,493	0/0:13,0:13:27.02:0,27,351	0/0:18,0:18:39.12:0,39,564	0/0:11,0:11:30.09:0,30,429	0/0:28,0:28:81.24:0,81,1181	0/0:16,0:16:48.16:0,48,719	0/0:29,0:28:81.19:0,81,1129	0/0:26,0:26:78.25:0,78,1137	0/0:8,0:8:18.06:0,18,267	0/0:3,0:3:9.03:0,9,135	0/0:12,0:12:33.11:0,33,494	0/0:9,0:9:27.08:0,27,384	0/0:27,0:27:72.24:0,72,1077	0/0:20,0:20:60.20:0,60,898	0/0:27,0:27:72.24:0,72,1065	0/0:13,0:13:39.13:0,39,582
chr10	46169168	.	CT	C	6559.51	PASS	AB=0.721;AC=49;AF=0.875;AN=56;BaseQRankSum=3.629;DP=459;FS=4.137;HRun=12;HaplotypeScore=54.1340;InbreedingCoeff=0.4803;MQ=68.38;MQ0=0;MQRankSum=0.291;QD=15.43;ReadPosRankSum=0.540;VQSLOD=5.6779;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,16:20:43.86:331,44,0	1/1:1,4:5:8.96:70,9,0	0/1:16,0:9:0.68:1,0,44	0/0:8,0:4:0.47:0,0,1	1/1:7,19:26:20.27:341,20,0	1/1:4,18:22:47.81:371,48,0	1/1:1,8:9:17.93:139,18,0	1/1:15,16:32:58.51:443,59,0	0/1:2,9:11:6.45:139,0,6	1/1:0,11:11:32.87:255,33,0	1/1:6,15:22:13.38:277,13,0	1/1:1,15:16:41.83:325,42,0	1/1:1,13:15:18.10:282,18,0	1/1:0,11:11:26.90:209,27,0	1/1:1,17:18:44.83:348,45,0	1/1:1,10:11:26.89:209,27,0	0/0:24,2:26:10.64:0,11,449	1/1:3,8:12:25.94:192,26,0	0/1:10,16:27:10.62:281,0,11	1/1:6,17:23:50.78:395,51,0	1/1:2,7:9:14.94:116,15,0	1/1:1,6:7:14.93:116,15,0	1/1:1,13:14:29.87:232,30,0	1/1:0,6:6:17.93:139,18,0	1/1:3,18:21:44.82:348,45,0	1/1:3,17:21:44.78:346,45,0	1/1:3,24:27:62.72:487,63,0	1/1:4,8:13:22.93:168,23,0
chr10	46170769	.	A	ACAGTTACCTGG	61845.62	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-5.559;DP=600;FS=0.000;HRun=0;HaplotypeScore=158.9662;InbreedingCoeff=0.9957;MQ=51.63;MQ0=0;MQRankSum=-11.697;QD=114.53;ReadPosRankSum=0.752;VQSLOD=5.1199;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,15:24:60.21:2759,60,0	1/1:6,4:11:30.05:1125,30,0	0/0:11,0:10:27.08:0,27,882	0/0:21,0:20:57.20:0,57,1673	1/1:13,7:24:45.15:1487,45,0	1/1:4,12:16:42.14:2117,42,0	1/1:15,13:33:81.28:3749,81,0	1/1:23,10:31:75.24:3388,75,0	1/1:4,18:23:66.23:3638,66,0	1/1:13,8:23:63.20:2904,63,0	1/1:8,7:16:39.09:1502,39,0	1/1:9,17:29:78.27:4136,78,0	1/1:13,10:25:66.23:3177,66,0	1/1:10,11:25:60.21:2985,60,0	1/1:8,12:21:57.19:2804,57,0	1/1:11,16:29:78.27:3902,78,0	0/0:28,0:28:81.26:0,81,2585	1/1:9,11:21:57.20:3043,57,0	1/1:11,7:22:57.15:2326,57,0	1/1:5,9:15:45.15:1913,45,0	1/1:12,6:25:42.14:1696,42,0	1/1:9,9:21:48.16:1874,48,0	1/1:6,6:13:33.11:1334,33,0	1/1:9,9:22:42.14:2006,42,0	1/1:6,3:9:24.08:923,24,0	1/1:7,10:21:63.18:2934,63,0	1/1:11,12:26:63.22:3122,63,0	1/1:1,5:6:18.06:1001,18,0
chr10	46172087	.	A	AAC	1010.08	PASS	AB=0.758;AC=20;AF=0.435;AN=46;BaseQRankSum=-3.405;DP=459;FS=3.033;HRun=0;HaplotypeScore=35.0550;InbreedingCoeff=0.7181;MQ=41.28;MQ0=217;MQRankSum=3.280;QD=5.67;ReadPosRankSum=-0.483;VQSLOD=2.1741;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,16:9:3.01:43,3,0	1/1:0,7:7:15.04:197,15,0	0/1:27,0:5:3.53:4,0,14	0/0:28,0:7:14.52:0,15,89	0/0:20,0:10:23.57:0,24,182	./.	1/1:7,3:3:5.88:35,6,0	1/1:8,1:5:11.90:101,12,0	0/0:5,12:7:2.68:0,3,11	0/0:25,0:11:18.81:0,19,192	0/0:13,0:7:14.52:0,15,126	1/1:4,14:9:6.02:84,6,0	1/1:2,7:5:6.02:86,6,0	0/0:15,0:4:12.03:0,12,130	./.	0/0:23,0:15:32.92:0,33,376	0/0:18,0:9:5.95:0,6,47	0/0:5,0:3:5.23:0,5,43	1/1:6,9:6:12.03:156,12,0	1/1:2,17:11:24.08:344,24,0	./.	./.	0/1:1,15:6:0:0,0,0	./.	0/0:25,0:16:37.33:0,37,371	0/0:19,0:10:21.25:0,21,202	1/1:4,16:10:8.91:129,9,0	0/0:13,0:5:15.04:0,15,168
chr10	46175163	.	CACAGGGCTCCTGGAAGGGCTAGGGCG	C	18559.68	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=14.941;DP=617;FS=10.701;HRun=0;HaplotypeScore=407.6038;InbreedingCoeff=0.9917;MQ=90.54;MQ0=0;MQRankSum=-14.468;QD=127.12;ReadPosRankSum=5.769;VQSLOD=3.5662;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,157,15939	0/0:10,0:10:27.09:0,27,2981	0/0:28,0:28:77.97:0,78,3799	0/0:26,0:26:77.91:0,78,3640	1/1:1,11:12:24.08:1609,24,0	0/0:19,0:19:54.19:0,54,5501	0/0:31,0:31:93.30:0,93,8573	0/0:24,0:24:69.17:0,69,4055	0/0:17,0:17:48.15:0,48,5017	1/1:1,22:23:65.81:3408,66,0	1/1:0,11:11:18.06:1257,18,0	0/0:26,0:26:72.23:0,72,7276	0/0:23,0:23:51.16:0,51,4749	1/1:1,19:20:39.13:2626,39,0	0/0:22,0:22:57.20:0,57,5543	1/1:2,22:24:30.10:2096,30,0	0/0:31,0:31:87.29:0,87,8297	1/1:2,10:12:12.04:779,12,0	0/0:19,0:19:54.16:0,54,3814	0/0:13,0:13:36.11:0,36,3227	0/0:45,0:45:99:0,129,12981	0/0:24,0:24:66.23:0,66,6984	0/0:9,0:9:24.07:0,24,1872	0/0:26,0:26:75.26:0,75,7842	1/1:0,15:15:36.06:2323,36,0	1/1:2,20:22:54.04:3204,54,0	0/0:25,0:25:66.20:0,66,6565	1/1:0,7:7:18.06:1258,18,0
chr10	46177589	.	ACAGGG	A	12006.57	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=10.311;DP=659;FS=2.267;HRun=0;HaplotypeScore=137.9009;InbreedingCoeff=0.9951;MQ=78.28;MQ0=0;MQRankSum=-6.799;QD=62.21;ReadPosRankSum=5.341;VQSLOD=5.5359;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:81.26:0,81,2575	0/0:10,0:10:30.10:0,30,1000	0/0:20,0:20:60.19:0,60,1643	0/0:14,0:14:42.11:0,42,1167	1/1:0,32:32:78.27:1677,78,0	0/0:29,0:29:84.29:0,84,2797	0/0:32,0:32:90.27:0,90,2846	0/0:51,0:51:99:0,154,4937	0/0:24,0:24:63.22:0,63,2094	1/1:0,28:28:84.28:1909,84,0	1/1:0,23:23:54.19:1258,54,0	0/0:18,0:18:54.19:0,54,1799	0/0:17,0:17:51.18:0,51,1692	1/1:0,19:19:54.19:1258,54,0	0/0:23,0:23:69.24:0,69,2297	1/1:0,20:20:48.16:1118,48,0	0/0:31,0:31:93.32:0,93,3041	1/1:1,15:16:42.14:968,42,0	0/0:20,0:20:60.20:0,60,1867	0/0:37,0:37:99:0,108,3555	0/0:28,0:28:84.29:0,84,2687	0/0:20,0:20:60.19:0,60,1817	0/0:26,0:26:68.95:0,69,2299	0/0:18,0:18:54.14:0,54,1687	1/1:0,21:21:63.22:1468,63,0	1/1:0,30:30:90.31:2071,90,0	0/0:21,0:21:63.22:0,63,2073	1/1:0,4:4:12.04:280,12,0
chr10	46177640	.	TG	T	4231.40	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=-1.405;DP=575;FS=7.840;HRun=8;HaplotypeScore=94.0675;InbreedingCoeff=0.9215;MQ=78.07;MQ0=2;MQRankSum=1.439;QD=17.93;ReadPosRankSum=2.475;VQSLOD=4.4140;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,28:32:71.12:718,71,0	0/0:7,0:7:18.01:0,18,201	0/0:29,0:22:44.79:0,45,412	0/1:23,0:20:12.72:13,0,210	0/0:18,0:18:42.13:0,42,505	1/1:5,15:20:14.22:296,14,0	1/1:5,22:27:45.06:430,45,0	1/1:9,25:34:68.74:603,69,0	1/1:2,18:20:39.06:376,39,0	0/0:29,0:29:69.16:0,69,806	0/0:17,0:17:39.09:0,39,439	1/1:1,14:15:36.06:348,36,0	1/1:0,18:18:48.08:463,48,0	0/0:14,0:14:33.08:0,33,377	0/0:28,0:28:78.16:0,78,900	0/0:22,0:22:53.37:0,53,605	0/0:25,0:25:75.19:0,75,879	0/0:20,0:20:45.12:0,45,529	0/0:17,1:18:19.15:0,19,491	0/0:24,0:26:68.99:0,69,751	0/0:23,0:23:60.13:0,60,686	1/1:2,9:11:26.94:241,27,0	1/1:2,23:25:54.04:512,54,0	1/1:1,10:11:24.04:232,24,0	0/0:17,0:17:33.10:0,33,398	0/0:19,0:19:54.14:0,54,623	0/0:20,0:20:57.17:0,57,678	0/0:7,0:7:21.04:0,21,240
chr10	46179719	.	T	TATCCATCC	15051.46	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=6.971;DP=880;FS=19.463;HRun=0;HaplotypeScore=302.9681;InbreedingCoeff=0.9700;MQ=45.28;MQ0=10;MQRankSum=-0.815;QD=19.83;ReadPosRankSum=-3.875;VQSLOD=2.3253;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:53,0:52:72.70:813,73,0	1/1:9,0:9:14.77:157,15,0	0/0:47,0:23:21.05:0,21,363	0/0:38,0:27:36.03:0,36,537	1/1:27,0:27:20.96:262,21,0	1/1:28,0:28:32.31:256,32,0	1/1:28,0:28:31.31:287,31,0	1/1:37,0:34:47.89:583,48,0	1/1:44,0:43:65.77:842,66,0	1/1:36,0:36:59.90:752,60,0	1/1:27,0:27:14.37:384,14,0	1/1:41,0:41:36.31:501,36,0	1/1:32,0:32:20.77:278,21,0	1/1:24,0:24:55.91:971,56,0	1/1:40,0:40:87.11:1022,87,0	1/1:48,0:48:97.96:1720,98,0	0/0:36,0:36:75.10:0,75,1643	1/1:28,0:28:52.03:845,52,0	1/1:16,2:23:27.92:709,28,0	1/1:26,0:26:28.41:348,28,0	1/1:31,0:30:15.38:114,15,0	1/1:29,0:29:38.84:419,39,0	1/1:19,0:17:18.87:226,19,0	1/1:32,0:32:17.22:147,17,0	1/1:28,0:28:36.72:707,37,0	1/1:32,0:32:48.13:836,48,0	1/1:27,0:27:58.01:1503,58,0	1/1:10,0:10:21.02:371,21,0
chr10	46179734	.	C	CCA	1254.07	PASS	AB=0.867;AC=13;AF=0.232;AN=56;BaseQRankSum=6.118;DP=858;FS=1.768;HRun=0;HaplotypeScore=257.8599;InbreedingCoeff=-0.2020;MQ=49.88;MQ0=6;MQRankSum=-0.491;QD=3.45;ReadPosRankSum=4.503;VQSLOD=2.3799;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:48:12.19:0,12,480	0/1:6,3:9:3.29:97,0,3	0/0:38,0:18:41.71:0,42,681	0/0:38,0:28:77.47:0,77,1183	0/1:29,1:30:3.82:4,0,187	0/0:25,0:25:58.30:0,58,422	0/0:30,0:30:37.94:0,38,345	0/0:38,0:35:62.56:0,63,469	0/1:40,0:39:18.54:19,0,543	0/0:32,0:32:61.54:0,62,516	0/1:26,1:27:30.45:30,0,225	0/0:42,0:42:42.48:0,42,598	0/0:28,0:28:69.72:0,70,512	0/1:20,7:27:99:132,0,249	0/1:19,17:36:99:603,0,133	0/1:41,6:47:88.49:88,0,615	0/0:32,0:33:93.21:0,93,1457	0/1:23,3:27:33.87:34,0,325	0/1:20,3:23:42.16:42,0,323	0/1:22,6:28:23.71:24,0,233	0/0:28,2:29:19.23:0,19,253	0/1:30,0:30:3.42:3,0,276	0/0:20,0:18:27.31:0,27,179	0/0:27,0:27:42.42:0,42,313	0/0:28,1:29:29.22:0,29,371	0/0:34,1:35:51.66:0,52,493	0/1:25,7:32:99:219,0,242	0/1:6,2:8:6.88:106,0,7
chr10	46182458	.	T	TG	5073.66	PASS	AB=0.767;AC=24;AF=0.429;AN=56;BaseQRankSum=3.097;DP=800;FS=14.684;HRun=1;HaplotypeScore=112.5466;InbreedingCoeff=-0.7476;MQ=48.71;MQ0=51;MQRankSum=3.079;QD=7.42;ReadPosRankSum=8.813;VQSLOD=-0.1178;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:21,7:21:99:169,0,180	0/1:4,4:7:30.24:81,0,30	0/0:29,0:2:6.01:0,6,59	0/0:32,0:4:8.31:0,8,69	0/1:25,5:29:99:111,0,657	0/1:8,4:9:29.91:81,0,30	0/1:11,8:15:99:114,0,135	0/0:22,1:13:12.19:0,12,440	0/1:21,15:22:99:211,0,218	0/1:38,17:46:99:568,0,900	0/1:13,9:19:99:224,0,294	0/1:16,9:16:99:278,0,209	0/1:15,18:28:99:551,0,265	0/1:45,10:41:99:221,0,779	0/1:20,20:30:99:486,0,391	0/1:52,5:38:5.37:5,0,907	0/0:32,0:29:81.16:0,81,996	0/1:38,4:34:95.51:96,0,821	0/1:15,5:15:99:118,0,311	0/1:11,5:12:70.75:221,0,71	0/1:14,21:28:90.54:406,0,91	0/1:9,6:10:74.85:75,0,102	0/1:10,2:7:74.84:75,0,102	0/1:16,7:20:99:226,0,230	0/1:23,7:30:99:114,0,615	0/1:25,10:30:99:367,0,547	0/1:10,7:14:99:272,0,230	0/1:17,2:17:6:6,0,425
chr10	46182498	.	TG	T	1112.97	PASS	AB=0.791;AC=21;AF=0.438;AN=48;BaseQRankSum=5.382;DP=473;FS=7.431;HRun=2;HaplotypeScore=51.2522;InbreedingCoeff=-0.0389;MQ=38.45;MQ0=69;MQRankSum=-3.048;QD=4.14;ReadPosRankSum=4.448;VQSLOD=0.5680;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:7,7:8:59.82:60,0,159	./.	./.	./.	0/1:15,1:14:8.84:9,0,374	./.	0/0:5,2:5:6.02:0,6,90	0/0:8,0:3:6.02:0,6,90	0/1:7,10:8:99:134,0,105	0/0:33,2:28:33.28:0,33,995	0/1:13,2:12:11.85:12,0,332	1/1:2,6:3:6.02:78,6,0	1/1:3,9:8:18.06:233,18,0	0/1:28,9:22:2.68:3,0,702	0/1:5,12:9:20.66:248,0,21	0/1:32,13:28:38.58:39,0,952	0/0:31,0:26:71.41:0,71,1115	0/1:14,11:18:99:155,0,318	0/0:7,0:4:9.03:0,9,135	0/1:8,1:4:13.92:14,0,39	0/0:10,3:5:3.01:0,3,45	1/1:2,1:2:3.01:39,3,0	0/0:10,0:6:9.03:0,9,135	1/1:1,5:5:9.03:117,9,0	0/0:15,0:12:30.09:0,30,431	0/1:20,3:16:13.78:14,0,510	1/1:4,3:5:6.02:78,6,0	0/1:14,1:11:35.68:36,0,243
chr10	46182561	.	TG	T	1383.95	PASS	AC=34;AF=0.810;AN=42;BaseQRankSum=-0.119;DP=203;FS=2.202;HRun=2;HaplotypeScore=12.4985;InbreedingCoeff=0.5445;MQ=46.44;MQ0=33;MQRankSum=-0.304;QD=13.98;ReadPosRankSum=2.868;VQSLOD=2.9812;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,13:8:15.05:195,15,0	0/0:1,0:1:3.01:0,3,45	0/0:26,0:6:12:0,12,150	0/0:22,0:8:21:0,21,266	./.	./.	1/1:0,3:2:6.02:78,6,0	./.	1/1:0,3:3:9.03:117,9,0	./.	1/1:1,7:4:6.02:78,6,0	1/1:0,3:2:6.02:78,6,0	1/1:0,2:1:3.01:39,3,0	1/1:1,13:5:12.04:155,12,0	1/1:0,5:5:6.02:78,6,0	1/1:1,10:6:15.05:195,15,0	0/0:26,0:20:39.13:0,39,583	1/1:2,4:4:12:137,12,0	./.	1/1:5,1:4:5.91:55,6,0	1/1:1,7:1:3.01:39,3,0	./.	./.	1/1:0,3:3:6.02:78,6,0	1/1:2,1:2:3.01:39,3,0	1/1:5,1:2:2.97:20,3,0	1/1:0,1:1:3.01:39,3,0	1/1:1,3:4:9.02:103,9,0
chr10	46182612	.	CCCT	C	573.83	PASS	AB=1.000;AC=21;AF=0.955;AN=22;BaseQRankSum=-1.588;DP=135;FS=3.214;HRun=0;HaplotypeScore=18.6396;InbreedingCoeff=-0.2014;MQ=65.88;MQ0=4;MQRankSum=-0.212;QD=8.83;ReadPosRankSum=-1.059;VQSLOD=1.9395;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	./.	1/1:10,2:6:6:72,6,0	0/1:15,0:7:36.18:36,0,89	./.	./.	./.	./.	./.	1/1:2,0:2:6.01:66,6,0	./.	1/1:3,3:3:3.01:48,3,0	1/1:0,3:3:9.03:143,9,0	1/1:1,4:1:3.01:37,3,0	1/1:3,2:4:3.01:48,3,0	./.	./.	./.	./.	1/1:2,0:2:3.01:44,3,0	./.	./.	./.	./.	./.	1/1:0,11:5:3.01:41,3,0	1/1:1,2:3:6.02:95,6,0	1/1:1,0:1:2.99:24,3,0
chr10	46184422	.	TGGCTCAG	T	10957.16	PASS	AB=0.553;AC=17;AF=0.304;AN=56;BaseQRankSum=18.251;DP=747;FS=2.884;HRun=0;HaplotypeScore=192.2021;InbreedingCoeff=0.9152;MQ=86.10;MQ0=0;MQRankSum=-16.712;QD=54.79;ReadPosRankSum=3.376;VQSLOD=5.0418;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,126,4778	0/0:12,0:12:33.09:0,33,1204	0/0:31,0:31:81.28:0,81,2827	0/0:25,0:25:69.24:0,69,2450	1/1:1,22:23:36.12:832,36,0	0/0:35,0:34:99:0,99,3824	0/0:37,0:37:99:0,105,3805	0/0:30,0:30:78.27:0,78,2848	0/0:28,0:28:81.25:0,81,2966	1/1:5,17:22:54.19:1331,54,0	1/1:0,12:12:27.09:665,27,0	0/0:30,0:30:81.25:0,81,2806	0/0:26,0:26:78.27:0,78,2903	0/1:5,21:26:39.13:1253,0,39	0/0:36,0:36:99:0,105,3729	1/1:1,17:18:48.16:1230,48,0	0/0:29,0:29:84.29:0,84,3054	1/1:5,21:26:54.19:1385,54,0	0/0:29,0:29:75.25:0,75,2729	0/0:11,0:11:33.11:0,33,1307	0/0:55,0:55:99:0,160,5996	0/0:23,0:23:63.22:0,63,2338	0/0:18,0:18:51.18:0,51,1943	0/0:26,0:26:75.26:0,75,2955	1/1:2,28:30:72.25:1819,72,0	1/1:4,26:30:75.17:1673,75,0	0/0:23,0:22:66.21:0,66,2289	1/1:2,11:13:30.10:769,30,0
chr10	46185199	.	GATCGCTTTACT	G	9432.11	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=13.258;DP=720;FS=9.654;HRun=0;HaplotypeScore=263.8479;InbreedingCoeff=0.9987;MQ=79.13;MQ0=0;MQRankSum=-12.845;QD=67.37;ReadPosRankSum=1.232;VQSLOD=3.0268;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,99,4535	1/1:0,14:14:21.07:780,21,0	0/0:32,0:31:87.30:0,87,3980	0/0:31,0:31:38.26:0,38,3286	0/0:26,0:26:78.27:0,78,3863	0/0:22,0:22:66.23:0,66,3166	0/0:28,0:28:84.29:0,84,4137	0/0:31,0:31:93.32:0,93,4087	0/0:26,0:26:78.27:0,78,3852	0/0:29,0:29:87.30:0,87,4174	0/0:23,0:23:69.24:0,69,3276	0/0:31,0:31:93.31:0,93,4408	0/0:20,0:20:60.21:0,60,2731	0/0:32,0:32:96.33:0,96,4633	1/1:1,22:23:51.18:1865,51,0	0/0:30,0:30:90.31:0,90,4090	0/0:29,0:29:87.30:0,87,4961	0/0:30,0:30:90.31:0,90,4282	1/1:0,21:21:56.96:1536,57,0	1/1:0,24:24:60.21:2164,60,0	1/1:0,27:27:24.08:865,24,0	0/0:14,0:14:42.14:0,42,2092	0/0:23,0:23:66.23:0,66,3225	0/0:23,0:23:66.23:0,66,3346	0/0:14,0:14:39.13:0,39,1988	0/0:29,0:29:87.30:0,87,4201	1/1:0,31:31:60.21:2222,60,0	0/0:21,0:21:63.22:0,63,3035
chr10	46186617	.	TG	T	6632.46	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=3.950;DP=656;FS=4.188;HRun=5;HaplotypeScore=76.7760;InbreedingCoeff=0.9992;MQ=87.76;MQ0=0;MQRankSum=-3.754;QD=30.15;ReadPosRankSum=3.086;VQSLOD=5.6356;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,37:41:99:1189,105,0	0/0:12,0:12:26.89:0,27,219	0/0:26,0:26:57.16:0,57,745	0/0:27,1:27:53.76:0,54,675	0/0:17,0:17:45.10:0,45,552	1/1:1,16:17:48.14:545,48,0	1/1:1,30:31:78.22:885,78,0	0/0:33,0:33:87.29:0,87,1189	1/1:0,18:18:48.14:545,48,0	0/0:29,0:29:75.25:0,75,1026	0/0:13,0:13:39.13:0,39,533	1/1:2,30:32:84.24:951,84,0	1/1:0,23:23:60.17:681,60,0	0/0:26,0:26:72.24:0,72,985	0/0:19,0:19:53.77:0,54,408	0/0:22,0:22:57.19:0,57,780	0/0:39,0:39:99:0,117,1601	0/0:29,0:29:84.24:0,84,1129	0/0:24,0:24:62.33:0,62,434	0/0:18,0:18:47.82:0,48,376	0/0:24,0:24:65.71:0,66,499	1/1:1,16:17:48.14:544,48,0	1/1:1,15:16:42.12:476,42,0	1/1:1,24:25:72.21:817,72,0	0/0:18,0:18:54.17:0,54,724	0/0:21,0:21:63.20:0,63,849	0/0:30,0:30:83.74:0,84,669	0/0:8,0:8:21.07:0,21,287
chr10	46191697	.	GA	G	927.37	PASS	AB=0.827;AC=15;AF=0.268;AN=56;BaseQRankSum=-5.177;DP=592;FS=2.145;HRun=16;HaplotypeScore=87.2547;InbreedingCoeff=0.5968;MQ=45.74;MQ0=21;MQRankSum=4.883;QD=4.61;ReadPosRankSum=1.859;VQSLOD=1.9994;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:40.69:0,41,227	0/0:10,0:12:13.26:0,13,87	0/1:6,0:1:0:0,0,0	0/0:9,1:3:3.21:0,3,13	0/1:14,17:31:22.97:155,0,23	0/0:19,0:20:4.80:0,5,97	0/0:17,0:15:28.30:0,28,151	0/0:23,2:23:2.07:0,2,196	0/0:13,0:13:13.59:0,14,109	1/1:19,19:34:9.76:268,10,0	1/1:15,3:18:10.73:126,11,0	0/0:17,0:17:9.41:0,9,71	0/0:20,0:20:30.54:0,31,168	0/1:19,5:24:25.01:98,0,25	0/0:15,0:14:17.18:0,17,103	1/1:17,3:20:23.23:136,23,0	0/0:39,0:39:60.37:0,60,602	1/1:15,6:18:27.44:152,27,0	0/0:32,0:32:1.87:0,2,182	0/0:12,0:32:12.07:0,12,92	0/0:12,0:11:10.39:0,10,40	0/0:1,0:13:7.99:0,8,34	0/0:22,0:20:14.77:0,15,69	0/0:6,0:14:8.52:0,9,42	0/0:17,1:19:10.85:0,11,211	1/1:23,1:24:9.58:115,10,0	0/0:21,0:21:21.71:0,22,127	1/1:7,8:13:11.55:52,12,0
chr10	46196694	.	G	GA	975.13	PASS	AB=0.757;AC=16;AF=0.286;AN=56;BaseQRankSum=-1.302;DP=503;FS=18.359;HRun=14;HaplotypeScore=74.9265;InbreedingCoeff=0.4512;MQ=54.37;MQ0=8;MQRankSum=-0.010;QD=5.24;ReadPosRankSum=-1.917;VQSLOD=0.2989;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:54.89:0,55,354	0/0:4,0:4:2.93:0,3,19	0/0:19,0:6:11.69:0,12,69	0/0:11,0:1:2.96:0,3,19	1/1:13,12:24:1.75:132,2,0	0/0:13,0:14:17.62:0,18,115	0/0:12,0:14:16.73:0,17,102	0/0:26,0:27:32.11:0,32,207	0/0:11,0:12:11.53:0,12,65	1/1:7,10:17:23.94:198,24,0	1/1:6,11:17:5.56:147,6,0	0/1:12,1:12:4.34:4,0,49	0/0:16,0:17:28.58:0,29,176	1/1:1,5:6:0.47:1,0,0	0/0:20,0:21:24.97:0,25,158	1/1:2,10:10:6:53,6,0	0/0:10,0:30:30.40:0,30,88	0/1:7,15:22:7.77:88,0,8	0/0:9,0:10:0.10:0,0,81	0/0:17,0:18:22.55:0,23,139	0/0:3,0:3:2.92:0,3,19	0/0:13,0:13:8.76:0,9,58	0/0:13,0:14:12.69:0,13,69	0/0:21,0:20:35.25:0,35,230	1/1:5,16:22:6.89:212,7,0	0/1:23,6:31:23.01:184,0,23	0/0:21,0:20:17.56:0,18,114	0/1:10,8:17:1.24:112,0,1
chr10	46196714	.	T	TA	435.58	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-4.699;DP=548;FS=0.000;HRun=11;HaplotypeScore=61.1825;InbreedingCoeff=0.5545;MQ=65.07;MQ0=6;MQRankSum=0.554;QD=12.10;ReadPosRankSum=-1.695;VQSLOD=2.8113;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:48,1:48:52.77:0,53,588	0/0:7,0:7:17.92:0,18,139	0/0:24,0:10:17.96:0,18,121	0/0:20,0:8:6.67:0,7,64	0/0:17,0:16:38.82:0,39,298	0/0:15,0:15:5.43:0,5,223	0/0:19,0:19:32.85:0,33,255	1/1:10,26:36:23.70:528,24,0	0/0:11,1:12:2.42:0,2,201	0/0:19,0:19:44.68:0,45,340	0/0:18,0:17:29.81:0,30,228	0/0:13,0:12:23.88:0,24,186	0/0:20,0:20:31.87:0,32,238	0/0:8,0:8:5.93:0,6,46	0/0:20,0:20:29.83:0,30,232	0/0:8,0:7:7.98:0,8,53	0/0:29,0:31:65.86:0,66,482	0/0:26,0:25:20.86:0,21,162	0/0:12,0:12:32.87:0,33,254	0/0:20,0:22:39.86:0,40,285	0/0:5,0:5:8.95:0,9,70	0/0:9,0:10:28.93:0,29,214	0/0:17,0:17:41.72:0,42,316	0/0:26,0:28:46.95:0,47,325	0/0:24,1:25:7.24:0,7,230	0/0:31,0:31:46.14:0,46,423	0/0:14,0:13:29.86:0,30,230	0/0:16,0:15:29.88:0,30,232
chr10	46196858	.	AGAAACC	A	4887.96	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=12.896;DP=524;FS=2.178;HRun=0;HaplotypeScore=115.8124;InbreedingCoeff=0.9968;MQ=89.59;MQ0=0;MQRankSum=-11.648;QD=49.37;ReadPosRankSum=-0.207;VQSLOD=4.6509;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,117,4126	1/1:0,6:6:18.06:443,18,0	0/0:20,0:20:56.08:0,56,1877	0/0:24,0:24:65.33:0,65,2164	0/0:14,0:14:42.14:0,42,1526	0/0:14,0:14:39.13:0,39,1427	0/0:38,0:38:99:0,114,3811	0/0:28,0:28:78.27:0,78,2803	0/0:17,0:17:51.16:0,51,1780	0/0:17,0:17:51.17:0,51,1773	0/0:15,0:15:45.15:0,45,1566	0/0:19,0:19:57.20:0,57,2086	0/0:17,0:16:42.13:0,42,1451	0/0:10,0:10:30.09:0,30,1011	1/1:2,14:16:36.10:878,36,0	0/0:12,0:11:30.03:0,30,888	0/0:31,0:31:90.31:0,90,3214	0/0:23,0:23:63.22:0,63,2222	1/1:4,16:20:48.15:1096,48,0	1/1:2,11:13:30.10:698,30,0	1/1:9,19:28:30.54:666,31,0	0/0:10,0:10:30.10:0,30,1099	0/0:7,0:7:21.07:0,21,768	0/0:23,0:23:69.24:0,69,2522	0/0:9,0:9:27.09:0,27,985	0/0:20,0:20:57.20:0,57,1968	1/1:1,15:16:45.15:1107,45,0	0/0:15,0:15:45.15:0,45,1640
chr10	46197970	.	C	CTGTGTG	3942.81	PASS	AB=1.000;AC=41;AF=0.732;AN=56;BaseQRankSum=1.256;DP=762;FS=0.692;HRun=0;HaplotypeScore=202.0394;InbreedingCoeff=0.3784;MQ=59.50;MQ0=24;MQRankSum=-1.496;QD=6.94;ReadPosRankSum=-1.181;VQSLOD=2.5752;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:28:10.26:117,10,0	1/1:20,3:22:5.92:115,6,0	0/0:56,0:23:17.86:0,18,202	0/0:81,0:34:17.45:0,17,251	0/0:11,0:11:2.98:0,3,23	1/1:19,0:19:5.82:90,6,0	1/1:36,0:35:9.31:167,9,0	1/1:34,0:34:17.66:294,18,0	1/1:23,0:23:2.97:20,3,0	1/1:36,0:36:26.98:301,27,0	1/1:10,0:10:3.01:59,3,0	1/1:25,0:25:8.41:60,8,0	1/1:9,0:9:3.04:44,3,0	0/1:33,0:33:85.86:88,0,86	1/1:19,7:26:20.96:332,21,0	0/1:21,0:20:53.89:96,0,54	0/0:24,0:26:38.79:0,39,668	0/0:20,0:18:15.02:0,15,166	1/1:19,0:18:34.61:513,35,0	1/1:14,1:16:7.10:120,7,0	1/1:67,1:59:23.28:329,23,0	1/1:16,0:16:1.55:5,2,0	0/1:16,0:16:0:0,0,0	1/1:29,0:29:6.02:89,6,0	0/1:27,0:26:24.44:70,0,24	0/1:25,0:25:35.81:362,0,36	1/1:17,2:20:26.62:619,27,0	1/1:7,0:7:3.01:54,3,0
chr10	46197994	.	GTGTGTGTGCA	G	1911.62	PASS	AB=0.990;AC=26;AF=0.464;AN=56;BaseQRankSum=1.129;DP=767;FS=26.700;HRun=0;HaplotypeScore=212.6579;InbreedingCoeff=0.2280;MQ=40.33;MQ0=37;MQRankSum=-2.706;QD=3.62;ReadPosRankSum=-4.528;VQSLOD=0.0864;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:23:10.18:117,10,0	1/1:21,1:21:11.24:91,11,0	0/0:30,0:9:13.88:0,14,196	0/1:53,0:16:26.80:27,0,228	0/0:15,0:14:14.91:0,15,423	1/1:13,0:13:5.58:90,6,0	1/1:30,0:28:11.36:173,11,0	1/1:42,0:36:26.35:246,26,0	0/1:20,0:19:24.06:42,0,24	0/1:34,0:33:99:106,0,806	0/0:19,0:18:15.51:0,16,460	1/1:26,0:25:8.15:67,8,0	0/0:12,0:12:3.17:0,3,25	0/0:35,0:34:37.89:0,38,774	1/1:26,2:27:10.61:242,11,0	0/0:27,0:25:37.95:0,38,1325	0/0:28,0:28:66.07:0,66,1862	0/0:27,0:25:26.95:0,27,776	0/1:31,1:28:99:351,0,338	0/1:17,1:18:93.20:93,0,162	0/1:92,0:87:99:188,0,358	1/1:24,0:23:1.29:4,1,0	0/0:11,0:11:0:0,0,0	1/1:23,0:23:5.77:89,6,0	0/0:26,0:25:0.36:0,0,410	0/1:28,0:28:30.78:31,0,1173	0/1:19,0:19:99:135,0,549	0/0:9,0:7:3.01:0,3,101
chr10	46197996	.	GTGTGTGCA	G	2239.34	PASS	AB=0.997;AC=27;AF=0.482;AN=56;BaseQRankSum=1.366;DP=762;FS=19.295;HRun=0;HaplotypeScore=194.2345;InbreedingCoeff=0.1150;MQ=40.45;MQ0=34;MQRankSum=-2.472;QD=3.99;ReadPosRankSum=-4.731;VQSLOD=0.1148;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:23:11.91:160,12,0	0/1:24,0:23:2.35:74,0,2	0/0:25,0:8:2.98:0,3,185	0/1:52,0:17:40.13:40,0,230	0/0:16,0:15:17.93:0,18,418	1/1:10,2:12:7.29:95,7,0	1/1:26,3:27:12.64:154,13,0	1/1:42,0:36:10.18:302,10,0	1/1:17,1:17:5.88:51,6,0	0/1:32,0:31:99:179,0,735	0/0:19,0:18:14.01:0,14,387	1/1:26,0:24:20.36:204,20,0	0/1:12,0:12:3.55:11,0,4	0/0:35,0:34:24.21:0,24,586	0/1:30,0:29:9.63:253,0,10	0/0:28,0:26:37.41:0,37,1135	0/0:28,0:28:65.74:0,66,1653	0/0:29,0:27:32.16:0,32,711	0/1:32,1:28:99:319,0,266	0/1:18,0:18:79.17:79,0,139	0/1:95,0:90:99:181,0,288	1/1:24,0:23:3:25,3,0	0/0:9,2:11:0:0,0,0	1/1:21,0:21:5.44:88,5,0	0/1:23,0:22:23.54:24,0,355	0/1:28,0:28:84.28:84,0,981	0/1:19,0:19:91.04:91,0,481	0/0:9,0:7:2.92:0,3,110
chr10	46197998	.	GTGTGCA	G	2685.21	PASS	AB=0.975;AC=30;AF=0.536;AN=56;BaseQRankSum=1.832;DP=757;FS=28.088;HRun=0;HaplotypeScore=177.8896;InbreedingCoeff=-0.2114;MQ=40.54;MQ0=34;MQRankSum=-1.111;QD=4.21;ReadPosRankSum=-4.179;VQSLOD=0.1356;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:21,1:22:12.01:160,12,0	0/1:23,0:22:32.46:76,0,32	0/1:25,0:8:7.83:8,0,229	0/1:49,0:15:44.12:44,0,254	0/0:13,0:12:18.06:0,18,350	1/1:12,0:12:8.14:103,8,0	1/1:22,7:27:14.37:171,14,0	0/1:42,0:36:35.14:306,0,35	0/1:15,2:16:8.02:18,0,8	0/1:31,0:30:99:255,0,640	0/1:18,0:17:26.65:27,0,311	1/1:23,1:22:20.50:310,21,0	1/1:12,0:12:6.49:74,6,0	0/0:36,1:36:0.39:0,0,526	0/1:32,0:31:15.41:235,0,15	0/1:27,1:26:41.15:41,0,898	0/0:30,0:30:71.92:0,72,1540	0/0:30,0:28:9.34:0,9,581	0/1:33,0:28:99:285,0,285	0/1:19,0:19:68.50:69,0,114	0/1:96,0:91:99:175,0,216	1/1:22,2:23:2.81:70,3,0	0/1:7,4:11:0.11:0,0,0	1/1:16,4:20:5.68:88,6,0	0/1:23,0:22:23.57:24,0,288	0/1:28,0:28:99:234,0,817	0/1:20,0:20:77.15:77,0,442	0/0:9,0:7:3.90:0,4,105
chr10	46198000	.	GTGCA	G	3512.93	PASS	AB=0.969;AC=34;AF=0.607;AN=56;BaseQRankSum=2.997;DP=742;FS=21.046;HRun=0;HaplotypeScore=161.2159;InbreedingCoeff=-0.3535;MQ=40.56;MQ0=34;MQRankSum=-2.445;QD=5.01;ReadPosRankSum=-3.227;VQSLOD=0.1996;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:22:11.97:160,12,0	0/1:23,0:22:15.81:76,0,16	0/1:22,0:8:13.69:14,0,251	0/1:45,0:13:52.11:52,0,235	0/0:13,0:12:21.05:0,21,326	1/1:12,0:12:8.93:143,9,0	1/1:29,0:27:13.93:202,14,0	0/1:41,0:35:98.60:483,0,99	0/1:15,0:14:4.57:7,0,5	0/1:31,0:30:99:270,0,614	0/1:16,2:17:26.66:27,0,266	1/1:24,0:22:11.65:269,12,0	1/1:11,0:11:2.38:37,2,0	0/1:31,5:35:99:146,0,430	1/1:31,0:31:3.08:233,3,0	0/1:27,1:26:52.95:53,0,682	0/0:28,0:28:72.07:0,72,1298	0/1:21,9:28:99:130,0,450	0/1:33,0:28:99:244,0,368	0/1:20,0:20:88.60:89,0,89	0/1:94,0:89:99:165,0,145	1/1:23,0:22:2.82:49,3,0	0/1:11,0:11:0.27:0,0,0	1/1:18,1:19:5.69:89,6,0	0/1:24,0:23:26.26:26,0,283	0/1:26,2:28:99:443,0,609	0/1:21,0:21:77.12:77,0,298	0/1:9,0:7:29.60:30,0,72
chr10	46198002	.	GCA	G	3990.30	PASS	AB=0.815;AC=36;AF=0.643;AN=56;BaseQRankSum=3.819;DP=710;FS=16.416;HRun=0;HaplotypeScore=144.1087;InbreedingCoeff=-0.2816;MQ=41.17;MQ0=30;MQRankSum=-2.558;QD=5.96;ReadPosRankSum=-2.226;VQSLOD=1.5968;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,10:21:11.87:160,12,0	1/1:21,2:22:2.62:79,3,0	0/1:18,1:8:14.59:15,0,242	0/1:37,4:13:50.89:51,0,286	0/0:11,1:11:16.54:0,17,279	1/1:7,5:12:9.03:138,9,0	1/1:17,12:27:14.03:203,14,0	0/1:24,15:33:99:642,0,118	1/1:8,5:12:2.84:14,3,0	0/1:17,13:29:99:337,0,619	0/1:12,6:17:26.93:27,0,232	1/1:14,10:22:11.57:255,12,0	1/1:5,4:9:5.85:47,6,0	0/1:22,13:34:99:143,0,433	1/1:27,3:29:15.65:256,16,0	0/1:23,4:25:99:139,0,560	0/0:28,0:28:69.42:0,69,1077	0/1:26,5:29:99:193,0,491	0/1:26,5:26:99:250,0,331	0/1:20,0:20:66.62:89,0,67	0/1:74,10:80:76.87:148,0,77	1/1:8,14:21:2.82:36,3,0	0/1:8,3:11:0.01:0,0,0	1/1:13,6:19:6.02:89,6,0	0/1:13,10:22:66.49:66,0,307	0/1:19,9:28:99:480,0,487	0/1:20,1:21:99:104,0,165	0/1:4,5:7:29.60:30,0,51
chr10	46198004	.	A	ATG	1884.66	PASS	AB=0.820;AC=24;AF=0.429;AN=56;BaseQRankSum=4.026;DP=724;FS=2.829;HRun=0;HaplotypeScore=157.8875;InbreedingCoeff=0.3799;MQ=41.44;MQ0=30;MQRankSum=-6.360;QD=4.48;ReadPosRankSum=-0.418;VQSLOD=3.1729;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:0:0,0,0	1/1:6,17:22:12.04:175,12,0	1/1:19,0:7:0.47:1,0,0	0/0:36,0:14:5.05:0,5,69	0/0:13,0:11:18.94:0,19,225	1/1:12,0:12:3.10:18,3,0	1/1:29,0:27:2.98:23,3,0	1/1:38,8:40:48.62:670,49,0	0/1:13,0:12:6.20:19,0,6	0/0:29,0:29:44.89:0,45,533	0/0:20,0:19:23.22:0,23,235	0/1:24,0:22:1.22:18,0,1	1/1:8,0:8:2.73:16,3,0	0/0:39,0:38:35.44:0,35,447	1/1:11,19:29:6:89,6,0	0/0:27,0:25:44.08:0,44,500	0/0:26,0:26:38.73:0,39,686	0/0:32,0:30:47.72:0,48,494	0/1:21,10:26:2.93:453,0,3	0/1:7,13:20:35.52:41,0,36	0/1:35,58:89:19.14:218,0,19	1/1:22,0:21:2.97:20,3,0	0/1:11,0:11:0.12:0,0,0	0/1:18,0:18:0.02:0,0,0	0/0:23,0:22:23.56:0,24,269	0/0:28,0:28:17.16:0,17,374	0/1:6,14:21:13.45:283,0,13	0/0:9,0:7:3.48:0,3,38
chr10	46198010	.	G	GCA	193.88	PASS	AB=0.951;AC=13;AF=0.232;AN=56;BaseQRankSum=6.571;DP=698;FS=1.470;HRun=0;HaplotypeScore=161.5395;InbreedingCoeff=0.1688;MQ=41.46;MQ0=30;MQRankSum=-4.076;QD=0.92;ReadPosRankSum=1.754;VQSLOD=2.1247;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:16:1.94:6,2,0	1/1:22,1:22:7.15:31,7,0	0/0:19,0:6:18.06:0,18,252	0/0:30,0:16:30.02:0,30,515	0/0:13,0:11:21.07:0,21,337	0/0:10,1:11:8.89:0,9,122	0/1:27,1:26:37.23:49,0,37	0/0:48,0:42:40.04:0,40,1122	0/1:9,1:9:6.19:55,0,6	0/0:30,0:29:70.43:0,70,1006	0/0:20,0:19:26.77:0,27,377	0/0:20,1:20:3.14:0,3,89	0/1:6,1:8:15.49:29,0,15	0/0:38,0:37:46.73:0,47,1001	0/1:26,0:26:14.15:14,0,49	0/0:28,0:26:51.14:0,51,821	0/0:27,0:27:66.56:0,67,1033	0/0:30,0:28:59.88:0,60,937	0/1:28,2:25:79.06:79,0,263	0/1:21,0:21:0.72:1,0,110	0/0:90,0:86:5.27:0,5,302	0/0:20,0:19:0.47:0,0,1	0/1:11,0:11:0.24:0,0,1	0/1:16,0:17:0.06:0,0,0	0/0:23,0:22:27.09:0,27,436	0/0:27,0:27:78.12:0,78,1074	0/1:20,0:20:46.87:62,0,47	0/0:10,0:8:12.02:0,12,153
chr10	46198018	.	GCA	G	340.93	PASS	AB=0.877;AC=18;AF=0.321;AN=56;BaseQRankSum=6.621;DP=663;FS=12.223;HRun=0;HaplotypeScore=146.7566;InbreedingCoeff=0.1877;MQ=42.33;MQ0=27;MQRankSum=-4.302;QD=1.23;ReadPosRankSum=-2.249;VQSLOD=1.6612;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:6,6:12:0.01:0,0,0	0/0:25,0:24:19.08:0,19,234	0/1:14,5:7:42.32:42,0,210	0/1:20,2:11:51.70:52,0,268	0/0:13,0:11:21.07:0,21,415	1/1:7,3:10:9.03:138,9,0	1/1:22,1:21:2.11:6,2,0	0/1:44,0:37:48.15:48,0,277	0/0:7,3:9:2.74:0,3,12	0/0:28,0:27:61.35:0,61,1245	0/0:19,0:18:22.71:0,23,337	0/1:14,5:17:26.32:27,0,26	1/1:4,3:7:3.07:11,3,0	0/0:39,0:38:13.01:0,13,1067	0/1:24,3:27:34.36:34,0,112	0/0:30,0:28:53.73:0,54,936	0/0:29,1:30:74.27:0,74,1443	0/0:27,0:25:10.61:0,11,898	0/1:25,1:20:55.65:56,0,431	0/0:19,0:19:11.81:0,12,152	0/0:90,3:89:25.53:0,26,972	1/1:15,2:16:2.80:24,3,0	0/1:9,1:10:0:0,0,0	0/1:11,2:13:0:0,0,0	0/0:26,0:25:39.13:0,39,717	0/1:27,1:28:50.99:51,0,892	0/0:18,0:18:29.50:0,29,337	0/0:9,0:7:15.05:0,15,228
chr10	46198020	.	ATG	A	712.51	PASS	AB=0.982;AC=5;AF=0.089;AN=56;BaseQRankSum=3.964;DP=675;FS=16.520;HRun=0;HaplotypeScore=148.7554;InbreedingCoeff=0.4408;MQ=43.94;MQ0=25;MQRankSum=-1.708;QD=7.66;ReadPosRankSum=-2.313;VQSLOD=2.0356;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:0:0,0,0	0/0:23,0:22:18.05:0,18,296	0/0:20,0:8:19.24:0,19,258	0/0:23,0:12:17.17:0,17,300	0/0:14,0:12:24.08:0,24,382	0/0:10,0:10:0.90:0,1,2	0/0:23,0:21:2.63:0,3,12	1/1:20,23:36:69.15:799,69,0	0/0:10,0:9:2.98:0,3,21	0/0:27,1:27:72.12:0,72,1115	0/1:17,1:17:14.03:14,0,324	0/1:19,0:17:1.84:2,0,22	0/0:7,0:7:2.45:0,2,20	0/0:38,2:39:34.25:0,34,1032	0/0:26,0:27:10.22:0,10,159	0/0:31,1:30:16.32:0,16,799	0/0:30,0:30:68.25:0,68,1158	0/0:27,0:25:51.44:0,51,850	0/0:27,0:24:41.32:0,41,698	0/0:19,0:19:14.06:0,14,201	0/0:96,1:94:78.02:0,78,1257	0/0:15,0:15:0:0,0,0	0/0:10,0:10:0:0,0,0	0/1:13,0:13:0.02:0,0,0	0/0:27,0:26:42.13:0,42,660	0/0:28,0:28:56.30:0,56,799	0/0:17,1:18:26.06:0,26,445	0/0:11,0:9:18.06:0,18,283
chr10	46198028	.	G	GTA	78.07	PASS	AB=0.892;AC=8;AF=0.148;AN=54;BaseQRankSum=4.935;DP=697;FS=1.190;HRun=0;HaplotypeScore=158.1523;InbreedingCoeff=0.4602;MQ=45.70;MQ0=18;MQRankSum=-3.985;QD=1.07;ReadPosRankSum=-0.611;VQSLOD=2.7116;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:11,1:12:0:0,0,0	0/0:24,0:24:26.91:0,27,314	0/0:26,0:12:32.40:0,32,316	0/0:31,0:19:45.85:0,46,479	0/0:12,0:11:24.05:0,24,323	0/0:8,0:8:2.88:0,3,25	1/1:12,6:16:3.01:57,3,0	0/0:36,0:32:91.95:0,92,649	0/1:9,0:8:6.20:21,0,6	0/0:32,0:31:84.11:0,84,1127	0/0:17,0:16:26.75:0,27,361	0/1:15,3:16:11.30:50,0,11	1/1:5,1:6:2.84:60,3,0	0/0:42,0:41:68.73:0,69,1081	0/0:29,0:28:2.01:0,2,144	0/0:35,0:33:66.04:0,66,852	0/0:30,0:30:86.68:0,87,1183	0/0:29,0:28:57.48:0,57,838	0/0:25,0:23:27.73:0,28,674	0/0:21,0:21:21.14:0,21,248	0/0:113,0:109:99:0,99,1354	./.	0/1:9,1:10:0.12:0,0,0	0/1:9,3:12:0:0,0,0	0/0:30,0:29:47.63:0,48,648	0/0:22,0:22:55.93:0,56,787	0/0:23,0:23:47.61:0,48,533	0/0:12,0:10:20.87:0,21,245
chr10	46198790	.	TA	T	7998.59	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=9.175;DP=708;FS=0.615;HRun=2;HaplotypeScore=94.0177;InbreedingCoeff=0.9954;MQ=80.46;MQ0=0;MQRankSum=-1.297;QD=35.55;ReadPosRankSum=5.335;VQSLOD=4.8946;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,40:40:99:1441,111,0	0/0:12,0:12:30.10:0,30,450	0/0:17,0:17:51.15:0,51,718	0/0:21,0:21:53.74:0,54,707	0/0:17,0:17:51.17:0,51,764	1/1:0,17:17:45.15:584,45,0	1/1:0,31:31:75.24:974,75,0	0/0:35,0:35:96.28:0,96,1393	1/1:0,21:21:63.20:818,63,0	0/0:34,0:34:99:0,102,1494	0/0:11,0:11:33.11:0,33,493	1/1:0,31:32:93.30:1200,93,0	1/1:0,23:23:63.20:818,63,0	0/0:35,0:35:99:0,105,1551	0/0:27,0:27:81.27:0,81,1212	0/0:29,0:29:87.29:0,87,1304	0/0:37,0:37:99:0,111,1619	0/0:28,2:30:12.44:0,12,1173	0/0:28,0:28:84.27:0,84,1222	0/0:21,0:21:63.19:0,63,903	0/0:46,0:46:99:0,129,1893	1/1:0,22:22:63.20:810,63,0	1/1:1,12:13:33.11:420,33,0	1/1:0,26:26:72.23:935,72,0	0/0:21,0:21:63.21:0,63,944	0/0:30,0:30:90.30:0,90,1347	0/0:17,0:17:51.17:0,51,764	0/0:15,0:15:45.15:0,45,674
chr10	46202812	.	TC	T	1979.26	PASS	AB=1.000;AC=33;AF=0.589;AN=56;BaseQRankSum=4.244;DP=465;FS=3.560;HRun=2;HaplotypeScore=91.8784;InbreedingCoeff=0.8654;MQ=60.66;MQ0=11;MQRankSum=-2.445;QD=7.76;ReadPosRankSum=2.032;VQSLOD=1.2840;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:15,2:16:9.51:52,10,0	1/1:5,0:4:10.54:53,11,0	0/0:64,0:26:42.48:0,42,364	0/1:58,0:17:5.66:6,0,122	0/0:20,0:20:32.69:0,33,274	1/1:12,0:11:12.33:36,12,0	1/1:6,1:5:13.96:80,14,0	1/1:26,0:28:43.83:310,44,0	1/1:6,0:7:10.27:42,10,0	0/0:22,0:21:55.44:0,55,418	0/0:17,0:17:40.34:0,40,274	1/1:7,2:7:13.48:89,13,0	1/1:11,0:13:9.42:36,9,0	0/0:10,0:9:21.31:0,21,153	1/1:4,0:4:11.32:66,11,0	0/0:9,0:9:23.04:0,23,179	0/0:13,0:13:32.40:0,32,224	0/0:10,0:10:26.05:0,26,163	1/1:18,9:25:55.57:507,56,0	1/1:2,12:13:29.78:230,30,0	1/1:2,2:5:5.69:37,6,0	1/1:11,1:11:22.30:129,22,0	1/1:11,2:13:14.73:73,15,0	1/1:3,0:3:5.68:53,6,0	0/0:9,0:9:25.92:0,26,169	0/0:25,0:25:62.27:0,62,392	1/1:10,9:20:46.77:399,47,0	0/0:11,0:10:23.45:0,23,161
chr10	46202813	.	C	CTTTT	2899.71	PASS	AB=0.972;AC=29;AF=0.518;AN=56;BaseQRankSum=-1.539;DP=466;FS=1.592;HRun=4;HaplotypeScore=117.0615;InbreedingCoeff=0.7091;MQ=58.11;MQ0=12;MQRankSum=-2.229;QD=14.72;ReadPosRankSum=-0.636;VQSLOD=-0.3022;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,10:17:11.71:161,12,0	1/1:5,0:4:7.05:35,7,0	0/0:64,0:25:24.83:0,25,442	0/0:60,0:16:10.82:0,11,178	0/0:20,0:20:33.14:0,33,561	1/1:1,10:11:18.06:460,18,0	1/1:6,1:5:14.95:185,15,0	1/1:28,1:28:51.54:613,52,0	1/1:4,2:7:15.43:226,15,0	0/0:22,0:21:56.67:0,57,759	0/0:16,0:17:42.15:0,42,552	1/1:6,3:7:14.91:212,15,0	1/1:4,7:13:11.60:128,12,0	0/0:9,0:9:21.50:0,21,226	1/1:4,0:4:11.58:78,12,0	0/0:9,0:9:23.50:0,23,310	0/0:12,0:12:30.69:0,31,350	0/0:10,0:10:20.31:0,20,317	0/1:24,0:25:37.47:176,0,37	0/1:12,0:13:30.93:31,0,51	1/1:5,0:5:4.03:21,4,0	1/1:3,9:11:25.32:374,25,0	1/1:10,2:12:17.47:237,17,0	1/1:3,0:3:6:54,6,0	0/0:9,0:9:26.24:0,26,387	0/0:25,0:25:66.90:0,67,854	0/1:16,0:20:50.58:121,0,51	0/0:11,0:10:24.92:0,25,389
chr10	46202816	.	T	TTC	858.16	PASS	AB=0.950;AC=13;AF=0.232;AN=56;BaseQRankSum=1.109;DP=476;FS=3.731;HRun=0;HaplotypeScore=112.9527;InbreedingCoeff=0.2138;MQ=55.17;MQ0=17;MQRankSum=0.174;QD=5.84;ReadPosRankSum=0.184;VQSLOD=3.2508;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:16,2:17:19.16:60,0,19	0/0:5,0:4:11.61:0,12,74	0/0:72,0:25:15.59:0,16,324	0/0:65,0:17:16.27:0,16,162	0/0:20,0:20:28.32:0,28,317	1/1:11,0:10:18.05:211,18,0	1/1:7,0:5:4.67:44,5,0	0/1:32,0:31:21.73:201,0,22	1/1:7,0:7:12.24:119,12,0	0/0:20,0:19:53.77:0,54,537	0/0:16,0:16:44.92:0,45,412	0/1:8,0:6:18.31:50,0,18	0/1:12,0:12:22.35:37,0,22	0/0:9,0:8:15.91:0,16,154	0/0:3,0:3:7.82:0,8,38	0/0:9,0:9:24.04:0,24,252	0/0:12,0:12:29.88:0,30,251	0/0:10,0:10:14.62:0,15,201	0/1:28,0:26:58.52:59,0,75	0/0:15,0:14:13.14:0,13,67	0/0:5,0:5:1.25:0,1,3	0/1:12,0:11:25.65:146,0,26	0/1:8,4:12:31.44:92,0,31	0/0:2,0:2:0.47:0,0,2	0/0:10,0:9:18.78:0,19,228	0/0:27,0:27:73.35:0,73,763	0/0:17,0:18:4.04:0,4,85	0/0:11,0:10:24.82:0,25,246
chr10	46202833	.	TGGGCC	T	1772.28	PASS	AB=0.947;AC=33;AF=0.589;AN=56;BaseQRankSum=-2.042;DP=362;FS=53.833;HRun=0;HaplotypeScore=88.1032;InbreedingCoeff=-0.0746;MQ=45.60;MQ0=21;MQRankSum=0.509;QD=8.77;ReadPosRankSum=0.157;VQSLOD=0.0973;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:11,0:10:13.84:14,0,58	1/1:1,3:3:9.03:197,9,0	0/0:77,0:17:24.05:0,24,513	0/0:67,0:16:29.55:0,30,495	0/1:11,1:12:0.55:73,0,1	0/1:7,0:6:7.93:8,0,41	1/1:6,0:3:9.02:104,9,0	0/1:16,1:16:44.78:75,0,45	1/1:5,2:7:2.95:48,3,0	0/0:9,0:8:7.86:0,8,98	0/1:8,0:9:2.77:76,0,3	1/1:7,0:5:6.07:82,6,0	0/1:6,0:7:11.91:12,0,28	0/1:5,1:5:5.87:58,0,6	1/1:1,2:3:9.03:177,9,0	0/1:6,0:6:12.43:73,0,12	1/1:5,0:5:0.82:114,1,0	1/1:2,3:5:13.73:137,14,0	1/1:18,0:18:5.54:135,6,0	0/1:10,0:8:30.71:31,0,33	0/0:4,0:4:1.32:0,1,2	0/1:6,0:5:21.20:21,0,35	0/1:6,0:6:8.66:9,0,21	0/0:1,0:1:0:0,0,0	1/1:6,0:5:8.95:69,9,0	0/1:22,0:24:99:176,0,106	0/1:14,2:16:50.94:227,0,51	1/1:4,0:4:0.93:11,1,0
chr10	46202834	.	GGGCC	G	2137.10	PASS	AB=0.954;AC=35;AF=0.625;AN=56;BaseQRankSum=-4.071;DP=356;FS=37.618;HRun=0;HaplotypeScore=81.9955;InbreedingCoeff=-0.1939;MQ=45.81;MQ0=21;MQRankSum=0.881;QD=10.08;ReadPosRankSum=-1.768;VQSLOD=0.4534;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:11,0:10:48.61:62,0,49	1/1:4,0:3:9.03:136,9,0	0/0:77,0:17:22.51:0,23,454	0/0:66,0:16:27.36:0,27,471	1/1:11,1:12:5.13:136,5,0	0/1:7,0:6:37.40:56,0,37	1/1:5,0:2:6.02:81,6,0	0/1:17,0:16:53.60:140,0,54	1/1:6,1:7:9.23:50,9,0	0/1:9,0:8:21.71:22,0,63	1/1:9,0:9:3.77:79,4,0	1/1:5,2:5:11.71:128,12,0	0/1:7,0:7:25.89:26,0,37	0/1:6,0:5:25.96:54,0,26	1/1:3,0:3:9.02:117,9,0	0/1:5,1:6:28.80:104,0,29	0/1:4,1:5:0.22:154,0,0	1/1:5,0:5:14.04:139,14,0	0/1:18,0:18:21.41:136,0,21	0/1:9,0:7:22.77:40,0,23	1/1:3,1:4:3.63:10,4,0	0/1:4,2:5:13.23:58,0,13	0/1:5,0:5:20.80:35,0,21	0/0:1,0:1:0:0,0,0	1/1:6,0:5:8.65:90,9,0	0/1:22,2:24:99:225,0,131	0/1:15,1:16:15.65:218,0,16	0/1:4,0:4:0.59:1,0,13
chr10	46202835	.	GGCC	G	2550.35	PASS	AB=0.806;AC=38;AF=0.679;AN=56;BaseQRankSum=-3.118;DP=343;FS=41.237;HRun=0;HaplotypeScore=74.9057;InbreedingCoeff=-0.1494;MQ=46.33;MQ0=21;MQRankSum=0.999;QD=12.69;ReadPosRankSum=-0.906;VQSLOD=1.3882;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:8,3:10:28.58:57,0,29	1/1:3,0:3:9:79,9,0	0/0:75,0:17:2.68:0,3,329	0/0:65,0:16:25.70:0,26,353	1/1:10,1:11:9.78:171,10,0	0/1:3,4:6:11.10:144,0,11	1/1:2,2:2:6.01:71,6,0	1/1:5,6:13:4.32:251,4,0	1/1:3,3:7:8.59:47,9,0	0/1:7,1:8:47.11:54,0,47	1/1:7,1:9:17.52:117,18,0	1/1:3,4:5:12.02:125,12,0	0/1:5,1:7:15.81:45,0,16	0/1:5,0:5:9.50:46,0,10	1/1:2,0:2:5.99:52,6,0	0/1:6,0:6:12.35:100,0,12	0/1:2,3:5:10.49:151,0,10	1/1:4,1:5:14.08:137,14,0	1/1:9,3:16:11.25:225,11,0	0/1:4,1:6:34.69:50,0,35	1/1:4,0:4:5.92:39,6,0	0/1:4,2:5:16.43:98,0,16	0/1:2,3:5:9.33:77,0,9	0/0:1,0:1:0:0,0,0	1/1:3,1:5:7.97:87,8,0	0/1:20,2:24:59.03:246,0,59	0/1:6,7:14:9.89:217,0,10	1/1:4,0:4:1.74:19,2,0
chr10	46202860	.	CG	C	3347.33	PASS	AC=48;AF=0.923;AN=52;BaseQRankSum=-0.759;DP=178;FS=2.574;HRun=2;HaplotypeScore=52.3860;InbreedingCoeff=0.3132;MQ=41.05;MQ0=8;MQRankSum=-1.620;QD=23.09;ReadPosRankSum=2.238;VQSLOD=3.6082;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,2:2:3.01:39,3,0	1/1:0,1:1:3.01:39,3,0	0/0:9,0:3:4.21:0,4,46	0/0:18,1:5:2.60:0,3,10	1/1:0,9:7:6.02:77,6,0	1/1:0,7:6:14.84:167,15,0	1/1:1,10:6:12.04:155,12,0	1/1:1,12:10:27.03:324,27,0	1/1:0,4:4:9.03:116,9,0	1/1:0,7:5:15.05:194,15,0	1/1:1,8:8:8.96:95,9,0	1/1:1,3:4:9.03:114,9,0	1/1:0,4:4:6:77,6,0	1/1:0,6:6:18.06:232,18,0	1/1:0,4:3:3.01:38,3,0	1/1:0,5:5:12.04:154,12,0	1/1:0,5:4:8.42:115,8,0	./.	1/1:1,14:15:41.72:511,42,0	./.	1/1:0,4:4:5.95:57,6,0	1/1:0,2:2:3.01:39,3,0	1/1:0,5:5:6.02:77,6,0	1/1:0,5:5:5.99:77,6,0	1/1:1,3:3:6.02:77,6,0	1/1:0,9:8:24.08:310,24,0	1/1:1,5:5:9.03:113,9,0	1/1:0,4:4:12.04:151,12,0
chr10	46202868	.	AG	A	4321.05	PASS	AC=52;AF=0.963;AN=54;BaseQRankSum=-1.072;DP=188;FS=0.000;HRun=4;HaplotypeScore=57.5856;InbreedingCoeff=0.3593;MQ=36.36;MQ0=5;MQRankSum=1.741;QD=24.55;ReadPosRankSum=2.056;VQSLOD=3.6081;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,3:5:15.02:157,15,0	1/1:0,1:1:3.01:36,3,0	1/1:3,0:1:0.47:1,0,0	0/0:9,1:4:2.74:0,3,12	1/1:0,12:10:15.05:179,15,0	1/1:1,7:7:21.06:249,21,0	1/1:0,13:9:21.06:251,21,0	1/1:3,11:12:27.08:318,27,0	1/1:0,4:4:9.03:107,9,0	1/1:1,7:7:21.06:241,21,0	1/1:2,9:10:18.04:202,18,0	1/1:1,3:4:9.03:106,9,0	1/1:0,5:5:12.02:143,12,0	1/1:0,6:6:18.06:215,18,0	1/1:1,6:6:12.04:143,12,0	1/1:2,5:7:18.03:192,18,0	1/1:1,5:5:11.42:138,11,0	1/1:0,1:1:3.01:35,3,0	1/1:2,13:14:36.11:429,36,0	./.	1/1:2,5:7:9.03:105,9,0	1/1:0,2:2:3.01:36,3,0	1/1:0,6:6:12.04:142,12,0	1/1:0,6:6:8.99:106,9,0	1/1:1,3:4:12.04:143,12,0	1/1:0,11:10:30.09:359,30,0	1/1:0,7:6:15.05:179,15,0	1/1:0,3:3:9.03:108,9,0
chr10	46202919	.	G	GC	11580.74	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-1.353;DP=403;FS=0.000;HRun=5;HaplotypeScore=89.3588;InbreedingCoeff=0.9435;MQ=57.51;MQ0=9;MQRankSum=-1.249;QD=32.99;ReadPosRankSum=1.600;VQSLOD=4.9926;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,24:24:60.19:783,60,0	1/1:1,2:3:6.02:79,6,0	0/0:20,0:12:27:0,27,273	0/0:13,0:9:17.77:0,18,185	1/1:2,21:21:54.17:703,54,0	1/1:1,19:19:54.18:709,54,0	1/1:5,20:24:51.17:671,51,0	1/1:6,15:17:42.14:553,42,0	1/1:0,8:8:18.06:237,18,0	1/1:2,12:14:39.13:507,39,0	1/1:1,17:17:42.05:528,42,0	1/1:0,10:10:24.08:316,24,0	1/1:1,11:12:30.10:392,30,0	1/1:0,9:9:27.09:355,27,0	1/1:0,16:15:39.13:509,39,0	1/1:0,13:12:36.12:474,36,0	0/0:19,0:18:51.13:0,51,548	1/1:1,8:9:27.03:335,27,0	1/1:2,16:18:42.14:547,42,0	1/1:0,9:9:24.08:316,24,0	1/1:0,13:13:39.13:512,39,0	1/1:0,8:8:24.08:315,24,0	1/1:1,11:12:27.09:355,27,0	1/1:0,18:18:54.18:710,54,0	1/1:0,11:11:30.10:393,30,0	1/1:1,20:21:60.17:770,60,0	1/1:0,9:9:27.09:355,27,0	1/1:1,5:6:12.04:158,12,0
chr10	46203303	.	CGAAAAAAA	C	698.64	PASS	AB=1.000;AC=14;AF=0.250;AN=56;BaseQRankSum=5.661;DP=544;FS=6.454;HRun=0;HaplotypeScore=141.3803;InbreedingCoeff=0.5009;MQ=51.53;MQ0=9;MQRankSum=-7.561;QD=5.46;ReadPosRankSum=-0.803;VQSLOD=2.0552;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:22.09:0,22,168	1/1:0,6:5:6.02:148,6,0	0/0:19,0:2:2.55:0,3,112	0/0:14,0:4:0.47:0,0,1	0/0:33,0:33:69.22:0,69,2470	0/0:15,0:15:8.71:0,9,49	0/0:17,0:17:14.59:0,15,88	1/1:18,0:12:6.49:83,6,0	0/0:21,0:21:17.61:0,18,121	0/0:24,0:23:45.15:0,45,1599	0/0:16,0:16:29.46:0,29,1049	0/0:19,0:19:15.42:0,15,83	0/0:12,0:12:14.14:0,14,102	0/0:28,0:28:51.17:0,51,1841	1/1:10,8:18:12.04:296,12,0	0/0:24,0:23:39.12:0,39,1336	0/0:37,0:37:60.17:0,60,2090	0/0:32,0:32:66.14:0,66,2099	1/1:23,0:22:4.38:67,4,0	1/1:15,0:14:0.44:139,0,0	0/1:6,0:6:4.71:14,0,5	0/0:13,0:13:16.07:0,16,129	0/1:10,0:10:11.05:11,0,46	0/1:15,0:15:1.22:1,0,99	0/0:19,0:19:30.06:0,30,944	0/0:32,0:31:57.17:0,57,1947	0/1:17,0:17:9.79:92,0,10	0/0:11,0:10:30.10:0,30,785
chr10	46203321	.	AAAAAAAG	A	1715.31	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=4.914;DP=592;FS=5.963;HRun=0;HaplotypeScore=149.1423;InbreedingCoeff=0.4036;MQ=54.81;MQ0=9;MQRankSum=-5.818;QD=7.52;ReadPosRankSum=-4.844;VQSLOD=0.5890;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:33:18.89:19,0,77	0/1:8,0:7:17.36:89,0,17	0/0:19,0:3:8.35:0,8,132	0/0:25,0:10:9.80:0,10,153	0/0:37,0:37:96.71:0,97,2745	0/0:17,0:15:3.54:0,4,8	0/1:21,0:19:2.51:3,0,26	1/1:27,2:23:42.90:517,43,0	0/0:23,0:23:9.63:0,10,38	0/0:28,0:27:43.15:0,43,1803	0/0:18,0:17:47.50:0,47,1442	0/0:17,0:17:1.25:0,1,48	0/1:18,0:17:0.24:0,0,55	0/0:20,0:20:57.18:0,57,1805	0/1:15,0:15:96.10:171,0,96	0/0:18,0:18:31.10:0,31,1268	0/0:27,0:27:75.17:0,75,2205	0/0:28,0:28:81.11:0,81,2113	1/1:28,0:26:40.44:338,40,0	1/1:21,1:21:35.92:346,36,0	1/1:8,0:8:8.99:68,9,0	0/0:19,0:19:14.56:0,15,117	0/1:11,0:11:6.46:6,0,30	0/1:19,0:19:14.75:15,0,91	0/0:15,0:15:39.06:0,39,952	0/0:37,0:36:69.19:0,69,2677	1/1:15,1:16:34.52:321,35,0	0/0:15,0:14:41.98:0,42,782
chr10	46203322	.	AAAAAAG	A	3587.69	PASS	AB=1.000;AC=27;AF=0.482;AN=56;BaseQRankSum=11.580;DP=595;FS=0.000;HRun=0;HaplotypeScore=134.0758;InbreedingCoeff=0.6094;MQ=54.80;MQ0=9;MQRankSum=-6.946;QD=11.84;ReadPosRankSum=-1.904;VQSLOD=2.3896;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:33,0:33:23.39:201,23,0	0/1:8,0:7:23.18:77,0,23	0/0:19,0:3:8.73:0,9,127	0/0:26,0:10:6.47:0,6,158	0/0:36,0:36:97.16:0,97,2480	1/1:17,0:15:10.98:49,11,0	1/1:20,0:18:31.82:138,32,0	1/1:29,0:23:37.36:257,37,0	1/1:23,0:23:15.88:77,16,0	0/0:28,0:27:65.93:0,66,1677	0/0:18,0:17:47.52:0,48,1278	1/1:17,0:17:15.58:134,16,0	0/1:18,0:17:6.47:70,0,6	0/0:21,0:21:60.18:0,60,1621	0/1:15,0:15:99:147,0,125	0/0:20,0:20:50.79:0,51,1220	0/0:27,0:27:75.18:0,75,1972	0/0:30,0:30:87.11:0,87,1955	1/1:26,2:26:64.98:882,65,0	1/1:4,18:21:41.41:603,41,0	1/1:7,1:8:14.45:207,14,0	0/1:18,0:18:17.79:63,0,18	1/1:12,0:12:5.99:86,6,0	0/1:19,0:19:30.20:72,0,30	0/0:15,0:15:39.06:0,39,855	0/0:37,0:36:95.08:0,95,2458	1/1:13,3:16:37.60:524,38,0	0/0:15,0:14:42.01:0,42,737
chr10	46203323	.	AAAAAG	A	4245.72	PASS	AB=1.000;AC=31;AF=0.554;AN=56;BaseQRankSum=14.604;DP=593;FS=0.741;HRun=0;HaplotypeScore=122.2819;InbreedingCoeff=0.7649;MQ=55.16;MQ0=8;MQRankSum=-7.879;QD=12.94;ReadPosRankSum=-2.739;VQSLOD=3.9632;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:33,1:34:72.39:562,72,0	0/1:8,0:7:24.47:66,0,24	0/0:19,0:3:6.86:0,7,95	0/1:25,0:11:13.12:13,0,154	0/0:36,0:36:96.73:0,97,2167	1/1:17,0:15:12:106,12,0	1/1:17,2:17:42.31:376,42,0	1/1:28,0:23:33.77:219,34,0	1/1:23,0:23:23.63:187,24,0	0/0:27,0:26:67.66:0,68,1505	0/0:19,0:18:50.38:0,50,1152	1/1:17,0:17:35.78:293,36,0	1/1:18,0:17:29.45:231,29,0	0/0:21,0:21:60.19:0,60,1420	0/1:14,0:14:99:124,0,136	0/0:20,0:20:52.02:0,52,1102	0/0:27,0:27:75.18:0,75,1738	0/0:29,0:29:87.17:0,87,1721	1/1:28,0:26:64.91:547,65,0	1/1:22,0:21:39.39:425,39,0	1/1:8,0:8:15.42:126,15,0	1/1:19,0:19:33.65:224,34,0	1/1:12,0:12:27.57:201,28,0	1/1:19,0:19:14.19:199,14,0	0/0:15,0:15:39.06:0,39,761	0/0:37,0:36:95.42:0,95,2161	1/1:15,1:16:35.85:347,36,0	0/0:15,0:14:42.01:0,42,678
chr10	46203324	.	AAAAG	A	6069.01	PASS	AB=1.000;AC=30;AF=0.536;AN=56;BaseQRankSum=14.000;DP=598;FS=10.057;HRun=0;HaplotypeScore=107.8606;InbreedingCoeff=0.6969;MQ=56.08;MQ0=8;MQRankSum=-9.555;QD=18.23;ReadPosRankSum=-1.732;VQSLOD=3.7554;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:28,7:35:80.39:1008,80,0	0/1:8,0:7:43.83:52,0,44	0/0:19,0:3:8:0,8,96	0/1:28,0:13:25.67:26,0,138	0/0:37,0:37:99:0,100,1962	1/1:0,17:15:12.04:217,12,0	1/1:12,7:17:44.91:646,45,0	0/1:29,0:24:39.08:158,0,39	1/1:3,20:23:24.08:407,24,0	0/0:28,0:27:77.73:0,78,1468	0/0:19,0:18:50.38:0,50,1030	1/1:12,5:17:41.89:583,42,0	1/1:13,5:17:38.81:489,39,0	0/0:20,0:20:60.20:0,60,1262	0/1:15,0:15:96.72:97,0,236	0/0:19,0:19:51.61:0,52,1003	0/0:27,0:27:75.18:0,75,1530	0/0:30,0:30:90.17:0,90,1633	1/1:29,0:27:63.93:428,64,0	1/1:22,0:21:30.29:345,30,0	1/1:8,0:8:16.79:105,17,0	1/1:15,3:18:45.91:437,46,0	1/1:8,4:12:29.98:413,30,0	1/1:12,7:19:30.12:399,30,0	0/0:14,0:14:38.67:0,39,668	0/0:37,0:36:99:0,104,1974	1/1:16,0:16:32.82:259,33,0	0/0:15,0:14:42.02:0,42,649
chr10	46203325	.	AAAG	A	4791.18	PASS	AB=1.000;AC=30;AF=0.536;AN=56;BaseQRankSum=15.083;DP=601;FS=12.740;HRun=0;HaplotypeScore=103.7663;InbreedingCoeff=0.7061;MQ=56.19;MQ0=7;MQRankSum=-11.287;QD=14.34;ReadPosRankSum=-1.891;VQSLOD=3.4585;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:35,1:36:83.85:814,84,0	0/1:8,0:7:40.17:40,0,55	0/0:19,0:4:9.37:0,9,90	0/1:28,0:13:8.77:9,0,121	0/0:38,0:38:99:0,106,1760	1/1:17,0:15:12.04:141,12,0	1/1:17,2:17:44.58:448,45,0	0/1:29,0:24:99:164,0,122	1/1:23,0:23:24.01:255,24,0	0/0:28,0:27:78.21:0,78,1341	0/0:19,0:18:50.37:0,50,873	1/1:14,1:15:42.01:445,42,0	1/1:18,0:17:42.54:422,43,0	0/0:21,0:21:63.17:0,63,1061	0/1:15,0:15:74.68:75,0,274	0/0:19,0:19:51.13:0,51,846	0/0:27,0:27:75.16:0,75,1287	0/0:30,0:30:90.09:0,90,1416	1/1:29,0:27:52.34:362,52,0	1/1:21,0:20:18.37:283,18,0	1/1:8,0:8:15.17:87,15,0	1/1:18,1:19:46.60:385,47,0	1/1:12,0:12:28.47:267,28,0	1/1:18,1:19:34.31:335,34,0	0/0:14,0:14:33.32:0,33,562	0/0:37,0:36:99:0,105,1718	1/1:18,0:18:31.47:259,31,0	0/0:15,0:14:42.02:0,42,614
chr10	46203327	.	AG	A	3922.43	PASS	AB=0.985;AC=30;AF=0.536;AN=56;BaseQRankSum=14.935;DP=604;FS=15.301;HRun=1;HaplotypeScore=87.4850;InbreedingCoeff=0.7250;MQ=57.54;MQ0=7;MQRankSum=-7.694;QD=11.67;ReadPosRankSum=-1.979;VQSLOD=0.4199;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:38,0:38:89.02:674,89,0	0/1:9,0:8:14.40:14,0,61	0/0:18,1:4:11.62:0,12,84	0/1:29,2:15:3.05:3,0,97	0/0:38,0:38:93.16:0,93,1131	1/1:17,0:15:11.97:94,12,0	1/1:19,0:17:49.75:368,50,0	0/1:29,0:24:97.59:180,0,98	1/1:21,0:21:23.37:170,23,0	0/0:29,0:28:81:0,81,883	0/0:19,0:18:50.45:0,50,528	1/1:15,0:15:41.78:324,42,0	1/1:16,1:16:42.42:317,42,0	0/0:21,0:21:63.03:0,63,652	0/1:16,0:16:23.09:23,0,209	0/0:18,0:18:50.62:0,51,522	0/0:25,0:25:75.03:0,75,797	0/0:31,0:31:92.97:0,93,942	1/1:24,3:25:32.77:375,33,0	1/1:21,0:20:28.23:236,28,0	1/1:6,2:8:13.85:84,14,0	1/1:20,0:20:49.93:346,50,0	1/1:12,0:12:30.27:226,30,0	1/1:19,0:19:33.14:252,33,0	0/0:16,0:16:39.08:0,39,408	0/0:37,0:36:99:0,100,1066	1/1:16,1:17:14.20:234,14,0	0/0:15,0:14:41.95:0,42,408
chr10	46203477	.	G	GTC	10679.76	PASS	AB=0.542;AC=25;AF=0.446;AN=56;BaseQRankSum=-13.342;DP=709;FS=0.000;HRun=0;HaplotypeScore=90.7443;InbreedingCoeff=0.9332;MQ=77.29;MQ0=0;MQRankSum=-3.294;QD=31.79;ReadPosRankSum=2.423;VQSLOD=6.7642;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:7,35:45:0.18:1468,0,0	0/0:8,0:8:15.03:0,15,168	0/0:31,0:28:38.83:0,39,458	0/0:38,0:36:29.51:0,30,479	0/0:23,1:25:59.97:0,60,666	1/1:6,14:21:5.95:590,6,0	1/1:7,27:34:66.23:1060,66,0	0/0:42,0:42:78.19:0,78,924	1/1:7,18:25:54.18:867,54,0	0/0:18,0:18:33.09:0,33,390	0/0:14,0:14:33.10:0,33,398	1/1:4,13:17:33.11:530,33,0	1/1:10,18:28:54.18:857,54,0	0/0:20,0:20:51.16:0,51,615	0/0:23,0:23:63.18:0,63,760	0/0:15,0:15:36.03:0,36,423	0/0:40,0:40:99:0,99,1183	0/0:36,0:36:69.19:0,69,820	1/1:13,19:32:60.20:956,60,0	1/1:8,14:23:8.96:633,9,0	1/1:6,23:29:57.19:916,57,0	1/1:4,19:23:45.15:720,45,0	1/1:5,20:25:57.19:916,57,0	1/1:4,11:15:30.10:482,30,0	0/0:17,0:17:27.08:0,27,325	0/0:35,0:35:81.22:0,81,954	1/1:3,15:19:11.97:686,12,0	0/0:10,0:10:24.07:0,24,289
chr10	46204673	.	T	TG	17084.23	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-10.158;DP=558;FS=1.964;HRun=1;HaplotypeScore=53.2933;InbreedingCoeff=0.9956;MQ=95.23;MQ0=0;MQRankSum=-7.969;QD=36.43;ReadPosRankSum=3.847;VQSLOD=5.0195;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,30:33:75.25:1123,75,0	1/1:0,11:11:30.10:449,30,0	0/0:24,0:24:60.19:0,60,831	0/0:27,0:27:81.26:0,81,1039	1/1:3,9:12:27.09:392,27,0	1/1:0,19:19:42.13:609,42,0	1/1:1,13:14:30.10:450,30,0	1/1:2,28:30:81.21:1113,81,0	1/1:1,17:18:36.12:539,36,0	1/1:5,12:17:39.09:542,39,0	1/1:1,8:9:21.07:302,21,0	1/1:1,16:17:36.12:539,36,0	1/1:0,27:27:75.25:1124,75,0	1/1:0,9:9:27.09:405,27,0	1/1:0,22:22:60.20:899,60,0	1/1:1,18:19:48.16:719,48,0	0/0:38,0:38:99:0,111,1405	1/1:0,25:25:69.23:1023,69,0	1/1:1,17:18:54.18:802,54,0	1/1:0,16:16:42.14:604,42,0	1/1:1,33:34:75.25:1124,75,0	1/1:3,15:18:36.03:538,36,0	1/1:2,7:9:21.07:311,21,0	1/1:1,14:15:39.13:585,39,0	1/1:0,13:13:30.10:449,30,0	1/1:3,19:22:60.19:870,60,0	1/1:2,25:27:69.23:1033,69,0	1/1:0,15:15:36.12:539,36,0
chr10	46204674	.	G	GA	7307.10	PASS	AB=0.929;AC=49;AF=0.875;AN=56;BaseQRankSum=9.907;DP=557;FS=5.002;HRun=2;HaplotypeScore=86.2191;InbreedingCoeff=0.7984;MQ=95.20;MQ0=0;MQRankSum=-8.002;QD=15.65;ReadPosRankSum=6.492;VQSLOD=4.7901;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:34,0:34:11.14:471,11,0	1/1:11,0:11:29.70:210,30,0	0/0:24,0:24:69.09:0,69,797	0/0:27,0:27:81.24:0,81,984	0/1:12,1:13:14.93:155,0,15	1/1:19,0:19:39.46:286,39,0	1/1:13,0:13:29.53:189,30,0	1/1:29,0:29:15.89:333,16,0	1/1:18,0:18:35.54:235,36,0	1/1:14,1:15:10.93:240,11,0	1/1:8,0:8:20.76:158,21,0	1/1:18,0:18:13.81:214,14,0	1/1:26,0:26:74.12:499,74,0	1/1:9,0:9:26.64:175,27,0	1/1:22,0:22:59.09:380,59,0	1/1:18,0:18:25.66:289,26,0	0/0:39,0:39:99:0,111,1359	1/1:25,0:25:68.06:443,68,0	1/1:18,0:18:53.27:383,53,0	1/1:16,0:16:24.46:256,24,0	1/1:33,0:33:74.09:497,74,0	1/1:18,0:18:12.88:238,13,0	1/1:9,1:10:20.74:156,21,0	1/1:17,0:17:17.81:239,18,0	1/1:13,0:13:29.63:205,30,0	1/1:22,1:23:55.99:383,56,0	1/1:27,0:27:26.67:422,27,0	1/1:14,0:14:35.69:252,36,0
chr10	46207193	.	GCCCCCT	G	93.82	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.051;DP=503;FS=0.000;HRun=0;HaplotypeScore=107.8447;InbreedingCoeff=0.9184;MQ=80.53;MQ0=0;MQRankSum=0.591;QD=18.76;ReadPosRankSum=-2.495;VQSLOD=2.1442;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,120,4293	0/0:7,0:7:21.07:0,21,753	0/0:15,0:15:40.69:0,41,1353	0/0:14,0:14:33.10:0,33,1047	0/0:16,0:16:42.14:0,42,1568	0/0:18,0:18:54.16:0,54,1879	0/0:20,0:20:60.21:0,60,2180	1/1:0,5:5:15.01:182,15,0	0/0:17,0:17:51.18:0,51,1857	0/0:15,0:15:45.15:0,45,1644	0/0:14,0:14:39.13:0,39,1453	0/0:21,0:21:63.22:0,63,2271	0/0:12,0:12:36.12:0,36,1352	0/0:7,0:7:21.07:0,21,787	0/0:17,0:17:51.18:0,51,1927	0/0:4,0:4:12.04:0,12,451	0/0:43,0:43:99:0,129,4691	0/0:4,0:4:12.04:0,12,452	0/0:15,0:15:45.15:0,45,1694	0/0:31,0:31:87.30:0,87,3238	0/0:25,0:25:75.26:0,75,2832	0/0:22,0:22:66.23:0,66,2445	0/0:31,0:31:93.31:0,93,3338	0/0:28,0:28:81.28:0,81,3046	0/0:18,0:18:54.19:0,54,1920	0/0:12,0:12:36.12:0,36,1355	0/0:19,0:19:57.20:0,57,2097	0/0:12,0:12:36.12:0,36,1355
chr10	46207624	.	G	GGAAT	1834.40	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-4.678;DP=762;FS=3.799;HRun=0;HaplotypeScore=122.9107;InbreedingCoeff=0.9950;MQ=89.64;MQ0=0;MQRankSum=-7.803;QD=65.51;ReadPosRankSum=-4.833;VQSLOD=3.9291;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:61,0:61:99:0,175,3139	0/0:13,0:13:27.09:0,27,487	0/0:32,0:32:84.23:0,84,1396	0/0:28,0:28:56.57:0,57,913	0/0:23,0:22:48.16:0,48,875	0/0:25,0:25:66.23:0,66,1215	0/0:24,0:24:66.18:0,66,1122	1/1:9,18:28:75.26:1929,75,0	0/0:30,0:30:81.28:0,81,1484	0/0:40,0:39:99:0,99,1821	0/0:23,0:23:63.22:0,63,1154	0/0:28,0:28:78.27:0,78,1436	0/0:26,0:26:75.25:0,75,1345	0/0:28,0:28:78.27:0,78,1426	0/0:33,0:33:93.32:0,93,1700	0/0:24,0:24:69.22:0,69,1240	0/0:46,0:46:99:0,138,2509	0/0:18,0:18:51.13:0,51,886	0/0:24,0:24:66.23:0,66,1212	0/0:19,0:19:57.20:0,57,1046	0/0:26,0:26:72.23:0,72,1288	0/0:21,0:21:63.20:0,63,1122	0/0:17,0:17:45.15:0,45,828	0/0:43,0:43:99:0,111,2030	0/0:19,0:19:51.17:0,51,918	0/0:34,0:34:99:0,99,1822	0/0:22,0:22:66.23:0,66,1207	0/0:7,0:7:21.07:0,21,386
chr10	46207937	.	C	CACACACACACAT	1880.64	PASS	AB=0.971;AC=18;AF=0.321;AN=56;BaseQRankSum=4.928;DP=558;FS=5.335;HRun=0;HaplotypeScore=180.1035;InbreedingCoeff=-0.2254;MQ=47.75;MQ0=10;MQRankSum=-2.458;QD=5.73;ReadPosRankSum=4.558;VQSLOD=1.9189;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:24:17.33:0,17,137	1/1:15,0:15:2.99:24,3,0	0/0:27,0:6:9.91:0,10,105	0/0:32,0:17:26.28:0,26,229	0/0:21,0:20:11.82:0,12,88	1/1:5,19:25:2.07:868,2,0	0/1:11,19:33:3.52:174,0,4	0/0:24,0:24:52.77:0,53,455	0/0:12,0:11:12.30:0,12,90	0/1:21,0:18:83.22:83,0,120	0/1:16,0:15:72.52:73,0,81	0/0:8,0:8:11.20:0,11,80	0/1:15,0:15:54.99:57,0,55	0/1:23,0:23:99:125,0,115	0/1:21,0:21:74.74:75,0,171	0/0:15,0:15:17.85:0,18,136	0/1:38,0:38:51.49:51,0,1542	0/1:21,0:21:99:137,0,188	0/1:18,0:16:67.83:68,0,115	0/0:21,0:20:11.97:0,12,96	0/1:17,0:16:29.56:30,0,59	0/1:14,0:14:17.48:37,0,17	0/0:13,0:13:5.96:0,6,44	0/0:24,0:22:10.83:0,11,92	0/1:23,0:21:88.93:113,0,89	0/1:15,0:14:20.23:20,0,67	0/1:13,0:13:49.22:105,0,49	0/0:7,0:6:11.42:0,11,95
chr10	46208376	.	AACACACACACACACACACAC	A	7770.51	PASS	AB=0.747;AC=32;AF=0.593;AN=54;BaseQRankSum=7.804;DP=563;FS=11.625;HRun=0;HaplotypeScore=275.4649;InbreedingCoeff=0.5233;MQ=62.79;MQ0=14;MQRankSum=-6.984;QD=23.48;ReadPosRankSum=0.321;VQSLOD=1.7804;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:15:4.91:150,5,0	0/0:6,0:6:12.93:0,13,853	./.	0/0:32,0:19:9.01:0,9,228	1/1:7,7:15:5.38:106,5,0	0/0:11,0:18:21.02:0,21,436	0/0:23,0:24:15.01:0,15,262	0/0:30,0:29:24.08:0,24,400	1/1:22,0:35:18.53:781,19,0	1/1:12,4:16:12.03:283,12,0	1/1:14,3:15:3.01:159,3,0	1/1:8,0:16:15.05:698,15,0	1/1:17,0:25:18.06:837,18,0	1/1:14,3:18:9.03:459,9,0	0/0:16,0:16:27.09:0,27,2121	1/1:7,9:16:12.01:496,12,0	0/0:25,0:28:39.11:0,39,2729	0/1:11,6:18:99:601,0,177	0/1:21,0:24:99:197,0,101	0/1:12,1:22:99:418,0,99	0/0:19,0:18:15.05:0,15,290	1/1:4,0:7:7.27:251,7,0	1/1:13,0:20:5.36:139,5,0	0/0:21,0:26:3.01:0,3,229	1/1:5,5:10:12.04:636,12,0	1/1:15,8:24:24.05:1078,24,0	0/1:11,0:20:99:160,0,123	1/1:9,2:11:6.02:319,6,0
chr10	46211354	.	CACAG	C	1015	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=8.098;DP=786;FS=6.404;HRun=0;HaplotypeScore=166.7079;InbreedingCoeff=0.9449;MQ=62.22;MQ0=8;MQRankSum=-4.513;QD=30.76;ReadPosRankSum=-7.472;VQSLOD=1.3077;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:33:66.16:0,66,1333	0/0:14,0:14:31.43:0,31,697	0/0:29,0:23:41.03:0,41,732	0/0:33,0:25:43.66:0,44,633	0/0:21,0:20:48.14:0,48,954	0/0:19,0:19:42.13:0,42,902	0/0:36,0:36:99:0,99,2187	1/1:4,29:30:86.62:1110,87,0	0/0:29,0:29:19.36:0,19,1311	0/0:26,0:26:72.15:0,72,1610	0/0:12,0:12:14.62:0,15,266	0/0:30,0:31:35.53:0,36,1214	0/0:29,0:28:20.64:0,21,989	0/0:28,0:28:69.39:0,69,1521	0/0:33,0:33:78.14:0,78,1533	0/0:31,0:29:38.64:0,39,1042	0/0:32,0:32:79.69:0,80,1666	0/0:39,0:39:54.91:0,55,1341	0/0:19,0:19:50.72:0,51,673	0/0:16,0:16:30.09:0,30,629	0/0:61,0:59:95.87:0,96,2297	0/0:19,0:19:30.09:0,30,602	0/0:18,0:18:41.17:0,41,902	0/0:54,0:54:74.34:0,74,2137	0/0:22,0:22:30.06:0,30,507	0/0:28,0:28:52.36:0,52,1330	0/0:20,0:20:54.10:0,54,1146	0/0:17,0:17:12.42:0,12,732
chr10	46211374	.	G	GACAC	1710.24	PASS	AB=0.964;AC=34;AF=0.680;AN=50;BaseQRankSum=-1.898;DP=719;FS=0.666;HRun=0;HaplotypeScore=155.0361;InbreedingCoeff=0.2624;MQ=51.34;MQ0=12;MQRankSum=-0.503;QD=3.18;ReadPosRankSum=-0.888;VQSLOD=2.3052;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:34,0:31:3.66:168,4,0	0/0:6,0:13:14.85:0,15,117	./.	./.	1/1:19,0:19:2.74:12,3,0	0/1:19,0:20:8.08:8,0,245	0/0:41,0:43:32.97:0,33,416	1/1:24,0:20:8.74:50,9,0	0/1:26,0:26:53.89:54,0,63	1/1:24,0:24:7.56:98,8,0	1/1:7,2:10:3.01:67,3,0	0/1:34,0:34:31.29:66,0,31	0/0:24,0:22:5.06:0,5,53	1/1:22,0:22:15.09:163,15,0	0/0:18,0:32:25.56:0,26,254	1/1:17,15:31:10.85:213,11,0	0/0:31,0:36:36.96:0,37,634	1/1:16,16:37:20.90:306,21,0	1/1:18,0:16:1.23:5,1,0	0/1:12,0:14:15.52:16,0,36	0/1:61,0:60:75.76:128,0,76	1/1:19,0:19:5.92:41,6,0	./.	1/1:51,0:51:8.76:180,9,0	1/1:12,11:23:3.01:70,3,0	1/1:30,0:29:11.66:83,12,0	1/1:19,0:19:8.50:80,8,0	0/1:14,1:15:38.97:66,0,39
chr10	46211890	.	A	AGTCT	9914.93	PASS	AB=0.632;AC=39;AF=0.696;AN=56;BaseQRankSum=-1.897;DP=498;FS=8.577;HRun=0;HaplotypeScore=114.8027;InbreedingCoeff=0.8686;MQ=80.51;MQ0=3;MQRankSum=-3.534;QD=30.70;ReadPosRankSum=4.420;VQSLOD=3.9192;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:24:39.06:568,39,0	0/0:6,0:6:9.03:0,9,149	0/0:38,0:26:13.85:0,14,315	0/0:44,0:35:25.76:0,26,327	1/1:6,8:15:15.05:368,15,0	0/0:16,0:16:33.10:0,33,521	0/0:19,0:19:48.12:0,48,715	0/0:21,0:21:39.10:0,39,556	1/1:15,0:15:20.96:301,21,0	1/1:4,9:13:27.02:608,27,0	1/1:3,5:8:6.02:143,6,0	1/1:23,0:23:51.12:804,51,0	1/1:11,0:12:21.06:339,21,0	1/1:6,9:16:15.05:367,15,0	0/0:15,0:15:33.07:0,33,473	1/1:4,18:23:39.13:958,39,0	0/0:15,0:15:33.06:0,33,492	0/1:5,7:12:11.95:137,0,12	1/1:10,4:15:15.02:230,15,0	1/1:6,3:9:15.05:338,15,0	1/1:21,9:30:54.06:996,54,0	1/1:17,0:17:24.06:408,24,0	1/1:11,0:11:18.04:286,18,0	1/1:26,0:25:33.05:464,33,0	1/1:4,3:7:9.03:221,9,0	1/1:2,12:16:42.10:858,42,0	1/1:9,8:18:45.08:930,45,0	1/1:2,10:12:24.08:590,24,0
chr10	46211909	.	C	CTG	3849.28	PASS	AB=0.916;AC=26;AF=0.464;AN=56;BaseQRankSum=8.945;DP=489;FS=8.747;HRun=0;HaplotypeScore=117.4220;InbreedingCoeff=-0.0711;MQ=76.76;MQ0=7;MQRankSum=-4.981;QD=11.06;ReadPosRankSum=7.572;VQSLOD=2.2290;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:16,10:25:31.11:252,0,31	0/0:5,0:5:15.05:0,15,226	0/0:52,0:26:17.35:0,17,619	0/1:55,0:39:5.93:6,0,487	0/1:10,0:10:26.59:101,0,27	0/0:12,0:12:33.09:0,33,483	0/0:22,0:22:63.19:0,63,933	0/0:23,0:23:63.18:0,63,880	0/1:10,3:13:4.44:164,0,4	0/1:13,0:13:96.33:173,0,96	0/1:6,0:6:35.51:38,0,36	1/1:8,12:20:14.48:441,14,0	0/1:7,5:12:1.61:181,0,2	1/1:11,0:11:14.95:118,15,0	0/0:15,0:15:42.10:0,42,575	0/1:20,0:20:2.57:269,0,3	0/0:12,0:12:33.06:0,33,457	0/1:10,0:10:38.04:38,0,53	0/1:10,0:10:60.58:61,0,181	0/1:11,0:11:67.66:130,0,68	0/1:28,0:28:75.23:375,0,75	0/1:14,7:21:53.53:194,0,54	0/1:6,6:12:20.14:155,0,20	1/1:14,9:22:32.95:318,33,0	1/1:3,0:3:8.98:72,9,0	0/1:18,0:18:99:193,0,137	1/1:15,0:15:44.91:407,45,0	0/1:11,0:11:17.52:164,0,18
chr10	46211911	.	C	CTGTCTG	4161.95	PASS	AB=0.911;AC=24;AF=0.429;AN=56;BaseQRankSum=10.322;DP=483;FS=6.855;HRun=0;HaplotypeScore=145.9327;InbreedingCoeff=0.0951;MQ=76.33;MQ0=8;MQRankSum=-5.747;QD=15.89;ReadPosRankSum=8.574;VQSLOD=1.4738;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:15,10:24:16.64:583,0,17	0/0:5,0:5:15.05:0,15,346	0/0:56,0:27:57.97:0,58,870	0/0:54,0:37:4.24:0,4,699	0/1:10,0:10:21.95:22,0,36	0/0:12,0:12:33.10:0,33,763	0/0:22,0:22:66.18:0,66,1451	0/0:23,0:23:66.19:0,66,1326	0/1:9,3:12:21.12:277,0,21	0/0:13,0:13:6.25:0,6,178	0/1:6,0:6:17.33:17,0,56	1/1:8,11:20:1.56:979,2,0	1/1:5,5:10:24.05:538,24,0	1/1:11,0:11:11.59:40,12,0	0/0:14,0:14:39.12:0,39,846	1/1:19,0:19:6.77:61,7,0	0/0:12,0:12:36.06:0,36,741	0/1:10,0:10:2.68:3,0,80	0/0:10,0:10:24.70:0,25,343	0/1:11,0:11:2.78:3,0,135	0/1:26,0:26:23.12:23,0,247	0/1:14,6:21:54.22:482,0,54	0/1:6,6:12:11.42:417,0,11	1/1:14,8:21:29.55:628,30,0	1/1:3,0:3:5.89:16,6,0	0/1:17,0:17:3.14:3,0,299	0/1:16,0:16:37.88:38,0,108	0/1:11,0:11:31.06:31,0,43
chr10	46211980	.	TC	T	1382.39	PASS	AC=20;AF=0.385;AN=52;BaseQRankSum=1.610;DP=228;FS=30.418;HRun=7;HaplotypeScore=37.4632;InbreedingCoeff=0.8135;MQ=95.59;MQ0=3;MQRankSum=0.138;QD=18.68;ReadPosRankSum=4.613;VQSLOD=1.7884;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,7:9:15.03:153,15,0	./.	0/0:37,1:24:40.25:0,40,491	0/0:39,0:23:19.92:0,20,256	0/0:5,0:5:12.04:0,12,151	0/0:2,0:2:6.02:0,6,75	0/0:4,0:4:6.02:0,6,75	0/0:8,0:9:18.06:0,18,226	./.	0/0:6,0:6:9.03:0,9,113	0/0:3,0:3:6.02:0,6,75	1/1:2,3:5:2.76:30,3,0	1/1:0,3:3:9.02:92,9,0	0/0:4,0:4:12.04:0,12,151	0/0:10,0:10:27.06:0,27,314	0/0:6,0:6:15.05:0,15,189	0/0:3,0:3:9.03:0,9,112	0/0:7,0:7:15.05:0,15,189	1/1:2,3:5:5.99:61,6,0	1/1:2,8:10:24:232,24,0	1/1:3,10:13:24.05:244,24,0	1/1:0,5:5:15.03:153,15,0	1/1:1,8:9:21.04:214,21,0	1/1:1,6:6:18.04:183,18,0	0/0:7,0:7:21.06:0,21,253	0/0:6,0:6:6.02:0,6,75	1/1:1,7:8:21.05:214,21,0	0/0:1,0:1:3.01:0,3,38
chr10	46213344	.	AAG	A	1299.43	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.371;DP=616;FS=0.000;HRun=0;HaplotypeScore=76.9381;InbreedingCoeff=0.9985;MQ=71.11;MQ0=0;MQRankSum=-1.925;QD=34.20;ReadPosRankSum=-3.479;VQSLOD=4.7419;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,138,2530	0/0:11,0:11:30.10:0,30,543	0/0:20,0:19:45.12:0,45,711	0/0:26,0:25:56.93:0,57,1012	0/0:13,0:13:33.11:0,33,605	0/0:20,0:20:57.19:0,57,1027	0/0:31,0:31:93.32:0,93,1683	1/1:5,33:38:99:1394,99,0	0/0:18,0:18:54.16:0,54,957	0/0:25,0:25:72.23:0,72,1265	0/0:12,0:12:36.10:0,36,627	0/0:27,0:27:81.26:0,81,1449	0/0:15,0:15:45.15:0,45,824	0/0:24,0:24:69.22:0,69,1193	0/0:18,0:18:48.15:0,48,850	0/0:22,0:22:63.22:0,63,1143	0/0:32,0:32:93.26:0,93,1639	0/0:14,0:14:39.13:0,39,696	0/0:25,0:25:66.21:0,66,1135	0/0:15,0:15:45.15:0,45,804	0/0:33,0:33:99:0,99,1772	0/0:20,0:20:57.18:0,57,1007	0/0:17,0:17:42.14:0,42,770	0/0:21,0:21:63.18:0,63,1086	0/0:22,0:22:66.23:0,66,1210	0/0:21,0:21:60.21:0,60,1101	0/0:20,0:20:57.18:0,57,1015	0/0:10,0:10:30.10:0,30,550
chr10	46214643	.	GC	G	455.61	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=8.093;DP=712;FS=0.783;HRun=1;HaplotypeScore=72.9831;InbreedingCoeff=0.9989;MQ=83.85;MQ0=0;MQRankSum=-5.823;QD=18.22;ReadPosRankSum=-3.379;VQSLOD=2.8685;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:37:99:0,114,1782	0/0:11,0:11:33.11:0,33,528	0/0:22,0:22:63.19:0,63,942	0/0:26,0:26:75.20:0,75,1112	0/0:18,0:18:54.18:0,54,860	0/0:10,0:10:30.10:0,30,480	0/0:35,0:35:99:0,105,1677	1/1:4,21:25:69.68:550,70,0	0/0:25,0:25:75.26:0,75,1199	0/0:25,0:25:75.25:0,75,1180	0/0:17,0:17:51.16:0,51,790	0/0:36,0:36:99:0,108,1724	0/0:23,0:23:69.21:0,69,1071	0/0:28,0:28:84.29:0,84,1343	0/0:25,0:25:75.26:0,75,1197	0/0:23,0:23:69.24:0,69,1097	0/0:41,0:41:99:0,123,1966	0/0:33,0:33:96.31:0,96,1499	0/0:15,0:15:42.14:0,42,670	0/0:31,0:31:90.29:0,90,1416	0/0:51,0:51:99:0,153,2406	0/0:16,0:16:48.16:0,48,767	0/0:11,0:11:33.11:0,33,525	0/0:27,0:27:81.25:0,81,1269	0/0:29,0:29:84.29:0,84,1329	0/0:32,0:32:96.30:0,96,1471	0/0:23,0:23:69.22:0,69,1075	0/0:16,0:16:45.15:0,45,704
chr10	46214645	.	TGC	T	509.81	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=8.115;DP=711;FS=0.789;HRun=0;HaplotypeScore=86.6764;InbreedingCoeff=0.9989;MQ=83.20;MQ0=0;MQRankSum=-5.921;QD=20.39;ReadPosRankSum=-3.365;VQSLOD=3.0062;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:35:99:0,105,1978	0/0:11,0:11:33.11:0,33,669	0/0:21,0:21:60.17:0,60,1061	0/0:25,0:25:72.21:0,72,1345	0/0:20,0:20:57.18:0,57,1096	0/0:10,0:10:30.10:0,30,609	0/0:36,0:36:99:0,108,2111	1/1:8,17:25:56.23:605,56,0	0/0:25,0:25:75.13:0,75,1428	0/0:25,0:25:75.10:0,75,1370	0/0:17,0:17:48.57:0,49,862	0/0:36,0:36:99:0,108,2101	0/0:23,0:23:69.24:0,69,1395	0/0:31,0:31:93.30:0,93,1784	0/0:26,0:26:78.25:0,78,1524	0/0:22,0:22:66.20:0,66,1267	0/0:43,0:43:99:0,129,2559	0/0:33,0:33:99:0,99,1922	0/0:14,0:14:42.14:0,42,845	0/0:30,0:30:87.27:0,87,1688	0/0:51,0:51:99:0,153,2983	0/0:16,0:16:48.15:0,48,907	0/0:11,0:11:33.11:0,33,668	0/0:27,0:27:81.28:0,81,1638	0/0:27,0:27:78.24:0,78,1505	0/0:30,0:30:90.28:0,90,1722	0/0:24,0:24:72.20:0,72,1314	0/0:16,0:16:48.13:0,48,869
chr10	46215970	.	CCTGA	C	699.68	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.314;DP=730;FS=1.040;HRun=0;HaplotypeScore=119.4278;InbreedingCoeff=0.9976;MQ=79.89;MQ0=0;MQRankSum=-3.619;QD=31.80;ReadPosRankSum=-2.463;VQSLOD=3.3376;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,129,3364	0/0:11,0:11:27.09:0,27,685	0/0:21,0:21:59.60:0,60,1358	0/0:26,0:26:60.20:0,60,1346	0/0:19,0:19:53.77:0,54,1422	0/0:15,0:15:45.15:0,45,1144	0/0:30,0:30:84.29:0,84,2198	1/1:6,16:22:48.12:795,48,0	0/0:29,0:29:75.24:0,75,1885	0/0:26,0:26:69.24:0,69,1762	0/0:10,0:10:30.10:0,30,800	0/0:39,0:39:99:0,111,2761	0/0:22,0:22:63.22:0,63,1581	0/0:35,0:35:99:0,102,2554	0/0:31,0:31:87.30:0,87,2235	0/0:31,0:31:90.31:0,90,2359	0/0:42,0:42:99:0,120,3056	0/0:33,0:33:90.31:0,90,2352	0/0:23,0:23:63.22:0,63,1604	0/0:16,0:16:45.15:0,45,1098	0/0:63,0:63:99:0,172,4476	0/0:12,0:12:33.11:0,33,854	0/0:14,0:14:36.11:0,36,880	0/0:35,0:35:90.31:0,90,2287	0/0:11,0:11:33.09:0,33,790	0/0:29,0:29:81.28:0,81,2081	0/0:30,0:30:87.30:0,87,2239	0/0:12,0:12:33.11:0,33,812
chr10	46216548	.	GA	G	967.60	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.684;DP=614;FS=0.000;HRun=3;HaplotypeScore=55.7487;InbreedingCoeff=0.9988;MQ=80.39;MQ0=0;MQRankSum=-2.091;QD=33.37;ReadPosRankSum=-3.769;VQSLOD=2.1873;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:84.24:0,84,1146	0/0:10,0:10:30.10:0,30,432	0/0:27,0:27:75.24:0,75,1050	0/0:13,0:13:31.34:0,31,411	0/0:30,0:30:90.30:0,90,1292	0/0:19,0:19:57.16:0,57,783	0/0:21,0:21:63.19:0,63,888	1/1:0,29:29:87.25:1062,87,0	0/0:17,0:17:45.13:0,45,612	0/0:19,0:19:54.18:0,54,774	0/0:23,0:23:69.23:0,69,988	0/0:20,0:20:60.19:0,60,849	0/0:20,0:20:57.19:0,57,821	0/0:14,0:14:42.14:0,42,601	0/0:24,0:24:69.23:0,69,993	0/0:23,0:23:63.21:0,63,903	0/0:32,0:32:93.29:0,93,1314	0/0:33,0:33:96.32:0,96,1370	0/0:16,0:16:45.14:0,45,632	0/0:25,0:25:72.24:0,72,1028	0/0:16,0:16:48.15:0,48,673	0/0:12,0:12:36.12:0,36,519	0/0:23,0:23:69.23:0,69,993	0/0:13,0:13:39.13:0,39,562	0/0:23,0:23:69.23:0,69,994	0/0:29,0:29:87.28:0,87,1237	0/0:39,0:39:99:0,114,1632	0/0:14,0:14:42.14:0,42,605
chr10	46216990	.	TCAACCTTCCTAACGCTG	T	20952.17	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=17.213;DP=629;FS=4.248;HRun=0;HaplotypeScore=296.2941;InbreedingCoeff=0.9982;MQ=57.31;MQ0=0;MQRankSum=-16.919;QD=85.17;ReadPosRankSum=3.930;VQSLOD=3.9873;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,25:31:51.17:2291,51,0	0/0:16,0:16:45.15:0,45,3169	0/0:12,0:11:27.09:0,27,1591	0/0:17,0:16:40.02:0,40,2433	0/0:17,0:17:51.18:0,51,3871	0/0:22,0:22:63.22:0,63,4756	0/0:39,0:39:99:0,117,8280	0/0:13,0:13:39.13:0,39,2122	1/1:5,16:22:51.18:2495,51,0	0/0:23,0:23:63.21:0,63,4978	0/0:17,0:17:48.16:0,48,3568	1/1:2,25:27:66.23:3221,66,0	1/1:5,13:18:33.11:1615,33,0	0/0:31,0:31:87.30:0,87,6513	0/0:31,0:31:90.31:0,90,6787	0/0:24,0:24:72.25:0,72,5595	0/0:41,0:41:99:0,120,8550	0/0:31,0:31:87.25:0,87,6483	1/1:6,9:15:27.05:1074,27,0	1/1:3,16:19:33.11:1615,33,0	1/1:10,12:22:18.06:863,18,0	1/1:2,14:16:33.11:1614,33,0	1/1:6,17:23:39.13:1908,39,0	1/1:10,17:27:27.09:1321,27,0	0/0:15,0:15:45.15:0,45,3528	0/0:24,0:24:69.23:0,69,5175	1/1:4,22:26:60.21:2935,60,0	0/0:10,0:10:30.10:0,30,2416
chr10	46217503	.	TCC	T	7054.04	PASS	AB=0.952;AC=23;AF=0.411;AN=56;BaseQRankSum=-6.385;DP=616;FS=7.039;HRun=10;HaplotypeScore=98.3923;InbreedingCoeff=0.9119;MQ=71.33;MQ0=0;MQRankSum=0.439;QD=23.99;ReadPosRankSum=2.271;VQSLOD=4.3528;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,24:32:63.14:702,63,0	0/0:8,0:11:26.02:0,26,284	0/1:18,0:19:16.21:16,0,379	0/0:9,0:9:14.64:0,15,193	0/0:2,0:15:29.82:0,30,103	0/0:23,0:26:68.72:0,69,1052	0/0:28,0:28:66.20:0,66,994	0/0:24,0:24:41.57:0,42,321	1/1:6,20:27:63.07:686,63,0	0/0:4,0:31:64.82:0,65,227	0/0:3,0:18:29.74:0,30,101	1/1:2,27:29:75.20:836,75,0	1/1:2,16:18:45.12:501,45,0	0/0:5,0:23:50.33:0,50,201	0/0:27,0:26:72.21:0,72,1077	0/0:0,1:16:6.99:0,7,95	0/0:23,0:23:60.20:0,60,949	0/0:4,0:31:64.88:0,65,223	1/1:2,15:17:42.10:468,42,0	1/1:0,22:22:63.17:702,63,0	1/1:8,35:43:87.20:970,87,0	1/1:5,17:22:45.10:502,45,0	1/1:2,21:23:57.15:635,57,0	1/1:4,16:20:48.11:535,48,0	0/0:1,0:17:33.30:0,33,123	0/0:0,0:15:37.31:0,37,129	1/1:3,18:21:45.12:502,45,0	0/0:2,0:8:17.96:0,18,74
chr10	46217508	.	C	CACCCT	1791.29	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-6.462;DP=634;FS=3.596;HRun=0;HaplotypeScore=162.1576;InbreedingCoeff=0.9552;MQ=71.73;MQ0=0;MQRankSum=-4.110;QD=63.97;ReadPosRankSum=-4.044;VQSLOD=3.3784;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:81.08:0,81,1063	0/0:12,0:12:33.06:0,33,504	0/0:22,0:21:50.91:0,51,711	0/0:9,0:9:10.51:0,11,271	0/0:14,0:14:41.96:0,42,606	0/0:28,0:28:78.23:0,78,1657	0/0:27,0:27:78.22:0,78,1524	1/1:0,15:28:78.14:1886,78,0	0/0:25,0:25:75.20:0,75,1053	0/0:29,0:29:82.55:0,83,1248	0/0:17,0:17:39.12:0,39,576	0/0:27,0:27:75.20:0,75,1097	0/0:20,0:20:50.98:0,51,690	0/0:23,0:23:66.18:0,66,956	0/0:29,0:28:84.18:0,84,1642	0/0:16,0:16:48.16:0,48,751	0/0:25,0:25:72.19:0,72,1478	0/0:31,0:31:87.23:0,87,1299	0/0:17,0:17:48.14:0,48,677	0/0:24,0:24:63.97:0,64,873	0/0:40,0:40:99:0,102,1397	0/0:28,0:28:53.43:0,53,832	0/0:24,0:24:63.18:0,63,897	0/0:23,0:23:69.15:0,69,898	0/0:18,0:18:51.16:0,51,780	0/0:22,0:22:63.13:0,63,862	0/0:19,0:19:46.62:0,47,649	0/0:7,0:7:21.06:0,21,308
chr10	46218259	.	CAT	C	1741.87	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-2.293;DP=514;FS=12.421;HRun=0;HaplotypeScore=97.8074;InbreedingCoeff=0.9750;MQ=73.91;MQ0=8;MQRankSum=-1.017;QD=12.71;ReadPosRankSum=-1.954;VQSLOD=2.4399;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:24:35.74:272,36,0	0/0:7,0:7:13.48:0,13,95	0/0:29,0:20:45.03:0,45,454	0/0:31,0:25:56.71:0,57,501	0/0:12,0:12:26.93:0,27,214	0/0:13,0:13:23.97:0,24,199	0/0:21,0:21:53.86:0,54,437	1/1:27,0:27:71.72:581,72,0	1/1:12,2:14:23.98:203,24,0	0/0:18,0:18:44.36:0,44,354	0/0:13,0:13:20.98:0,21,175	1/1:14,0:14:26.95:218,27,0	1/1:9,0:8:20.88:157,21,0	0/0:20,0:19:28.48:0,28,219	0/0:27,0:26:49.42:0,49,394	0/0:21,0:21:58.68:0,59,469	0/0:23,0:23:50.47:0,50,502	0/0:21,0:21:50.71:0,51,387	0/0:12,0:12:29.89:0,30,244	0/0:18,0:18:35.89:0,36,290	0/0:30,0:28:56.75:0,57,445	1/1:15,0:15:29.61:226,30,0	1/1:6,2:8:5.99:48,6,0	1/1:25,0:25:29.06:240,29,0	0/0:12,0:12:26.97:0,27,225	0/0:21,0:21:56.06:0,56,474	0/0:20,0:19:30.87:0,31,215	0/0:8,0:8:23.90:0,24,189
chr10	46218264	.	ATGTGTGTG	A	489.30	PASS	AB=0.935;AC=18;AF=0.643;AN=28;BaseQRankSum=3.196;DP=535;FS=6.239;HRun=0;HaplotypeScore=149.6275;InbreedingCoeff=0.3004;MQ=66.33;MQ0=13;MQRankSum=-1.635;QD=2.19;ReadPosRankSum=3.440;VQSLOD=1.9272;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	1/1:7,0:10:3.01:56,3,0	./.	./.	./.	./.	./.	0/1:27,0:27:0:0,0,0	1/1:13,0:13:6.02:111,6,0	1/1:18,0:17:3:28,3,0	0/1:13,7:20:0:0,0,0	./.	./.	1/1:17,7:23:3.01:73,3,0	1/1:21,0:22:12.01:173,12,0	1/1:19,0:22:3.01:68,3,0	0/0:28,0:27:34:0,34,1227	0/0:22,0:22:0:0,0,0	./.	./.	./.	./.	./.	0/1:23,0:23:0.17:0,0,0	0/0:12,5:17:3.01:0,3,62	0/1:21,0:21:20.48:20,0,59	1/1:15,0:20:3.01:56,3,0	./.
chr10	46218327	.	TAGAG	T	872.02	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-0.213;DP=546;FS=3.675;HRun=0;HaplotypeScore=134.0868;InbreedingCoeff=0.9565;MQ=51.75;MQ0=27;MQRankSum=-2.532;QD=37.91;ReadPosRankSum=-2.824;VQSLOD=2.8964;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:22:45.15:0,45,753	0/0:11,0:11:18.95:0,19,414	0/0:21,0:17:46.97:0,47,1154	0/0:25,0:20:56.86:0,57,1360	0/0:20,0:19:27.09:0,27,692	0/0:16,0:16:18.54:0,19,534	0/0:20,0:19:45.15:0,45,1154	1/1:4,19:23:57.19:967,57,0	0/0:24,0:24:50.64:0,51,718	0/0:17,0:13:36.12:0,36,880	0/0:17,0:17:21.07:0,21,538	0/0:18,0:17:24.51:0,25,374	0/0:15,0:15:33.11:0,33,517	0/0:18,0:17:20.89:0,21,503	0/0:15,0:15:36.12:0,36,881	0/0:16,0:15:18.06:0,18,462	0/0:25,0:24:60.64:0,61,1308	0/0:22,0:22:45.15:0,45,1065	0/0:9,0:8:24.04:0,24,518	0/0:17,0:17:27.09:0,27,685	0/0:21,0:18:33.11:0,33,831	0/0:22,0:20:45.15:0,45,738	0/0:21,0:19:36.02:0,36,622	0/0:20,0:19:20.83:0,21,322	0/0:27,0:25:42.11:0,42,1068	0/0:28,0:26:75.26:0,75,1837	0/0:23,0:20:32.84:0,33,744	0/0:8,0:7:21.07:0,21,523
chr10	46218379	.	TA	T	3036.46	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=5.221;DP=530;FS=2.609;HRun=11;HaplotypeScore=81.4565;InbreedingCoeff=0.9630;MQ=74.07;MQ0=0;MQRankSum=-0.895;QD=15.41;ReadPosRankSum=0.044;VQSLOD=4.1933;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,114,1162	0/0:11,0:12:32.90:0,33,326	0/0:28,1:24:16.93:0,17,300	0/0:22,0:16:25.62:0,26,188	1/1:1,22:24:62.66:499,63,0	0/0:17,0:17:48.12:0,48,511	0/0:19,1:21:35.31:0,35,554	1/1:6,0:35:52.47:154,52,0	0/0:24,0:24:60.15:0,60,640	1/1:2,17:19:52.49:422,52,0	1/1:2,12:15:37.94:295,38,0	0/0:15,0:15:36.09:0,36,384	0/0:16,0:16:33.07:0,33,345	1/1:2,8:10:20.95:172,21,0	0/0:19,2:21:7.79:0,8,468	1/1:2,22:24:50.92:419,51,0	0/0:15,2:17:5.90:0,6,364	1/1:0,20:20:41.95:345,42,0	0/0:7,0:7:18.05:0,18,192	0/0:16,0:16:42.10:0,42,446	0/0:10,0:10:30.07:0,30,317	0/0:23,0:23:57.14:0,57,607	0/0:18,0:18:36.08:0,36,375	0/0:11,0:11:12.68:0,13,176	1/1:2,22:24:27.94:436,28,0	1/1:5,16:21:47.91:391,48,0	0/0:13,0:13:33.06:0,33,343	1/1:0,5:5:14.98:123,15,0
chr10	46219963	.	TAC	T	919.25	PASS	AB=0.941;AC=17;AF=0.315;AN=54;BaseQRankSum=0.094;DP=767;FS=2.019;HRun=0;HaplotypeScore=130.0020;InbreedingCoeff=0.3026;MQ=55.50;MQ0=27;MQRankSum=1.204;QD=3.08;ReadPosRankSum=3.044;VQSLOD=2.5017;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:37:41.50:0,41,416	0/1:13,1:14:14.91:15,0,185	./.	0/0:64,0:23:0:0,0,0	0/0:11,0:10:6.01:0,6,55	1/1:9,0:15:8.43:40,8,0	1/1:12,0:23:11.36:56,11,0	0/1:25,0:24:2.81:3,0,14	0/0:23,0:28:48.06:0,48,541	0/0:26,0:26:28.15:0,28,225	0/0:8,0:10:2.99:0,3,24	0/0:35,0:40:46.25:0,46,487	0/0:29,1:32:26.17:0,26,345	0/1:17,0:22:5.04:5,0,170	0/1:23,2:26:70.88:71,0,368	0/0:24,0:31:19.01:0,19,197	0/1:33,3:36:70.40:70,0,487	0/0:21,0:25:30.46:0,30,325	0/1:14,1:15:35.92:57,0,36	1/1:9,6:15:3.29:91,3,0	1/1:37,18:60:41.44:385,41,0	0/1:16,1:18:32.34:32,0,203	0/0:4,0:6:5.99:0,6,49	0/0:31,1:42:4.62:0,5,467	0/0:18,0:23:20.02:0,20,157	0/0:22,0:21:14.85:0,15,164	1/1:14,8:25:27.98:261,28,0	0/0:5,0:6:8.97:0,9,73
chr10	46220053	.	TACAC	T	1357.85	PASS	AB=0.818;AC=15;AF=0.288;AN=52;BaseQRankSum=1.876;DP=639;FS=12.834;HRun=0;HaplotypeScore=113.2148;InbreedingCoeff=0.3818;MQ=53.24;MQ0=18;MQRankSum=2.425;QD=5.68;ReadPosRankSum=-0.632;VQSLOD=1.6339;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:18,8:25:32.87:156,0,33	0/0:6,0:6:5.45:0,5,15	./.	./.	0/0:11,0:11:9.03:0,9,135	0/0:23,0:22:34.91:0,35,508	0/1:24,0:26:11.69:12,0,373	0/0:33,0:29:20.84:0,21,257	1/1:11,12:23:8.92:134,9,0	0/0:27,0:26:47.94:0,48,642	0/0:2,0:7:3.01:0,3,48	1/1:11,16:28:14.56:216,15,0	1/1:10,11:21:24.08:379,24,0	0/0:11,0:11:2.90:0,3,66	0/1:16,1:25:13.37:66,0,13	0/0:20,0:22:23.94:0,24,335	0/0:32,0:32:63.53:0,64,1099	0/0:13,0:23:17.47:0,17,205	0/0:19,0:17:12.01:0,12,154	0/0:16,0:16:19.88:0,20,353	0/0:66,0:64:36.26:0,36,548	1/1:16,0:16:14.79:201,15,0	1/1:8,5:12:0.14:43,0,0	0/1:20,21:40:40.06:287,0,40	0/0:21,0:21:29.83:0,30,391	0/0:17,0:15:30.09:0,30,435	0/1:20,0:20:29.46:29,0,473	0/0:11,0:8:12.04:0,12,181
chr10	46222697	.	CT	C	8282.08	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=14.297;DP=778;FS=10.254;HRun=1;HaplotypeScore=75.3825;InbreedingCoeff=0.9944;MQ=86.65;MQ0=0;MQRankSum=-6.417;QD=37.14;ReadPosRankSum=4.462;VQSLOD=4.7593;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,35:35:96.32:1342,96,0	0/0:13,0:13:39.13:0,39,598	0/0:27,0:27:81.27:0,81,1269	0/0:24,0:24:68.98:0,69,984	0/0:21,0:21:63.21:0,63,1002	0/0:26,0:25:75.23:0,75,1152	0/0:20,0:20:60.19:0,60,931	0/0:35,0:35:99:0,105,1592	1/1:2,30:32:48.39:1240,48,0	0/0:22,0:22:63.21:0,63,988	0/0:14,0:14:42.13:0,42,644	1/1:0,40:40:99:1507,108,0	1/1:0,23:23:63.21:881,63,0	0/0:28,0:28:84.29:0,84,1340	0/0:39,0:39:99:0,117,1798	0/0:39,0:39:99:0,117,1871	0/0:32,0:32:96.31:0,96,1510	0/0:36,0:36:99:0,108,1698	0/0:27,0:27:75.24:0,75,1153	0/0:20,0:20:60.19:0,60,924	0/0:44,0:44:99:0,126,1912	1/1:0,31:31:78.26:1089,78,0	1/1:0,20:20:45.15:629,45,0	1/1:0,42:42:99:1594,114,0	0/0:27,0:27:81.24:0,81,1247	0/0:30,0:30:90.30:0,90,1419	0/0:27,0:27:81.28:0,81,1295	0/0:4,0:4:12.04:0,12,191
chr10	46223581	.	AC	A	5415.61	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=15.201;DP=549;FS=7.877;HRun=1;HaplotypeScore=71.4232;InbreedingCoeff=0.9759;MQ=89.63;MQ0=0;MQRankSum=-3.803;QD=34.94;ReadPosRankSum=2.868;VQSLOD=4.8699;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:48.15:0,48,743	0/0:4,0:4:12.04:0,12,191	0/0:22,0:22:66.17:0,66,965	0/0:19,0:19:51.10:0,51,756	1/1:1,7:8:18.06:235,18,0	0/0:14,0:14:36.12:0,36,575	0/0:36,0:36:99:0,108,1649	0/0:29,0:29:75.26:0,75,1198	0/0:20,0:20:60.20:0,60,959	1/1:2,9:11:24.54:304,25,0	1/1:2,2:4:7.27:84,7,0	0/0:29,0:29:84.26:0,84,1318	0/0:23,0:23:69.18:0,69,1050	1/1:0,33:33:81.26:1070,81,0	0/0:22,0:22:66.22:0,66,1050	1/1:0,24:24:66.22:871,66,0	0/0:46,0:46:99:0,138,2157	1/1:1,33:34:99:1296,99,0	0/0:17,0:17:51.17:0,51,786	0/0:8,0:8:24.08:0,24,383	0/0:23,0:23:66.23:0,66,1055	0/0:7,0:7:17.91:0,18,287	0/0:7,0:7:15.05:0,15,240	0/0:25,0:25:75.23:0,75,1174	1/1:0,13:13:39.12:502,39,0	1/1:1,20:21:59.17:775,59,0	0/0:25,0:24:75.22:0,75,1150	1/1:0,7:7:21.07:278,21,0
chr10	46224284	.	A	AAAAGTTCAACAGAGGCCT	1702.99	PASS	AB=0.800;AC=27;AF=0.964;AN=28;BaseQRankSum=-2.268;DP=35;FS=3.123;HRun=0;HaplotypeScore=30.9715;InbreedingCoeff=-0.1638;MQ=123.86;MQ0=0;MQRankSum=-2.176;QD=50.09;ReadPosRankSum=-0.787;VQSLOD=2.1767;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,0:3:6:72,6,0	./.	1/1:0,1:2:3.01:246,3,0	0/1:6,0:8:35.98:206,0,36	./.	1/1:2,0:2:6.02:146,6,0	./.	1/1:3,0:3:9.02:137,9,0	1/1:1,0:1:2.98:21,3,0	1/1:3,0:3:9.03:249,9,0	./.	./.	./.	1/1:2,0:2:6.02:165,6,0	1/1:2,0:2:6.01:144,6,0	./.	./.	./.	./.	1/1:2,0:2:6.01:97,6,0	./.	./.	1/1:1,0:1:3:25,3,0	1/1:1,0:1:2.97:20,3,0	1/1:2,0:2:6.02:230,6,0	1/1:2,0:2:3:27,3,0	./.	./.
chr10	46224458	.	CATCGAGCA	C	4787.27	PASS	AB=0.941;AC=17;AF=0.304;AN=56;BaseQRankSum=9.802;DP=446;FS=11.123;HRun=0;HaplotypeScore=163.6038;InbreedingCoeff=0.8729;MQ=90.38;MQ0=0;MQRankSum=-7.391;QD=29.92;ReadPosRankSum=-1.149;VQSLOD=3.9405;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:14,9:23:33.07:646,33,0	0/0:1,0:1:3.01:0,3,83	0/0:24,0:24:72.01:0,72,1888	0/0:33,0:31:61.17:0,61,2703	0/0:9,0:9:24.08:0,24,935	0/0:13,0:13:36.12:0,36,1477	0/0:13,0:13:39.13:0,39,1660	1/1:2,26:28:77.04:842,77,0	1/1:12,5:17:32.94:579,33,0	0/0:13,0:13:39.12:0,39,1364	0/0:5,0:5:15.04:0,15,456	1/1:10,7:17:38.90:743,39,0	1/1:9,7:16:41.98:715,42,0	0/0:20,0:20:45.15:0,45,1799	0/0:14,0:14:36.05:0,36,985	0/1:15,1:16:53.69:54,0,1248	0/0:29,0:29:75.24:0,75,2786	0/0:18,0:18:27.09:0,27,1157	0/0:14,0:14:42.14:0,42,1699	0/0:13,0:13:33.11:0,33,1280	0/0:25,0:25:60.12:0,60,2366	1/1:10,7:17:33.03:568,33,0	1/1:7,10:17:27.02:489,27,0	1/1:8,1:9:9.02:151,9,0	0/0:12,0:12:33.11:0,33,1212	0/0:14,0:14:42.13:0,42,1449	0/0:11,0:11:27.01:0,27,718	0/0:5,0:5:15.05:0,15,670
chr10	46224473	.	C	CAA	1898.39	PASS	AB=0.821;AC=12;AF=0.214;AN=56;BaseQRankSum=8.651;DP=423;FS=22.179;HRun=0;HaplotypeScore=135.1446;InbreedingCoeff=0.5501;MQ=78.01;MQ0=0;MQRankSum=-9.109;QD=16.37;ReadPosRankSum=-0.613;VQSLOD=1.9198;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:14,6:20:4.29:402,0,4	0/0:2,0:2:3.01:0,3,43	0/0:24,0:21:17.68:0,18,797	0/0:35,0:29:79.55:0,80,1159	0/0:9,0:9:24.08:0,24,390	0/0:13,0:13:36.11:0,36,560	0/0:19,0:19:54.17:0,54,855	0/1:21,0:19:33.43:33,0,82	1/1:6,4:10:10.90:344,11,0	0/0:12,0:12:33.11:0,33,536	0/0:4,0:4:9.03:0,9,146	1/1:8,5:13:11.08:276,11,0	0/1:11,3:14:25.08:264,0,25	0/0:15,0:15:33.11:0,33,535	0/0:15,0:15:33.11:0,33,479	0/0:18,0:18:33.58:0,34,539	0/0:26,0:26:63.11:0,63,993	0/0:18,0:18:27.09:0,27,436	0/0:19,0:19:54.18:0,54,868	0/0:12,0:12:30.10:0,30,483	0/0:27,0:27:65.83:0,66,1024	1/1:11,2:13:13.43:344,13,0	1/1:14,2:16:7.99:287,8,0	0/1:5,4:8:7.05:113,0,7	0/0:11,0:11:30.10:0,30,488	0/0:13,0:13:36.09:0,36,512	0/0:10,0:10:21:0,21,340	0/0:5,0:5:15.05:0,15,244
chr10	46224486	.	AAG	A	1818.72	PASS	AB=0.933;AC=19;AF=0.339;AN=56;BaseQRankSum=-5.476;DP=464;FS=21.670;HRun=0;HaplotypeScore=146.9898;InbreedingCoeff=0.8381;MQ=65.61;MQ0=2;MQRankSum=6.292;QD=14.21;ReadPosRankSum=2.131;VQSLOD=2.1712;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:15.64:0,16,75	0/0:2,0:2:3.85:0,4,11	0/0:25,1:19:23.51:0,24,332	0/0:34,0:27:47.40:0,47,549	1/1:5,9:14:17.75:195,18,0	0/0:12,0:12:21.03:0,21,313	0/0:16,0:16:38.98:0,39,536	0/0:17,0:15:29.39:0,29,176	0/1:13,1:14:20.78:21,0,56	1/1:3,12:15:33:315,33,0	1/1:1,4:5:12:136,12,0	0/0:15,0:15:17.97:0,18,90	0/0:17,0:17:25.09:0,25,104	1/1:5,10:15:24.08:305,24,0	0/0:15,0:15:14.26:0,14,38	1/1:6,13:19:23.93:315,24,0	0/0:29,0:29:72.13:0,72,1000	1/1:4,18:22:21.07:270,21,0	0/0:20,0:20:38.20:0,38,319	0/0:15,0:15:26.52:0,27,228	0/0:32,0:32:23.54:0,24,183	0/0:15,0:15:10.81:0,11,50	0/0:23,0:23:17.53:0,18,57	0/0:13,0:11:10.19:0,10,48	1/1:4,5:9:12.04:154,12,0	1/1:3,9:12:26.86:275,27,0	0/0:11,0:11:24.05:0,24,242	1/1:2,1:3:3.01:39,3,0
chr10	46224497	.	A	AGG	622.48	PASS	AB=1.000;AC=10;AF=0.179;AN=56;BaseQRankSum=1.832;DP=449;FS=3.147;HRun=10;HaplotypeScore=168.4505;InbreedingCoeff=0.6292;MQ=64.12;MQ0=3;MQRankSum=-0.853;QD=5.87;ReadPosRankSum=-2.989;VQSLOD=-0.2643;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:4.21:0,4,37	0/0:2,0:2:5.49:0,5,23	0/0:23,0:17:12.30:0,12,168	0/0:25,0:19:22.42:0,22,196	0/0:13,0:14:12.40:0,12,74	0/0:17,0:17:20.92:0,21,207	0/0:16,0:18:38.58:0,39,369	0/1:17,0:15:13.68:14,0,26	0/0:12,0:13:10.75:0,11,55	0/0:18,0:18:16.79:0,17,106	0/0:6,0:6:11.87:0,12,82	0/0:12,0:12:12.25:0,12,56	0/0:17,0:17:12.92:0,13,91	0/0:13,0:13:24.99:0,25,168	0/1:13,0:13:11.19:11,0,76	0/0:16,0:16:26.24:0,26,175	0/0:31,0:31:54.85:0,55,522	0/0:21,0:22:26.29:0,26,174	1/1:19,0:19:38.72:304,39,0	1/1:9,7:16:20.88:163,21,0	1/1:29,0:29:11.68:92,12,0	0/0:13,0:13:8.22:0,8,35	0/0:19,0:19:26.75:0,27,116	0/0:13,0:11:10.97:0,11,47	0/0:11,0:11:14.70:0,15,103	0/0:13,0:14:16.28:0,16,110	1/1:12,0:12:23.96:202,24,0	0/0:2,0:2:5.93:0,6,40
chr10	46224500	.	GGGGGGGGATC	G	3152.95	PASS	AB=1.000;AC=20;AF=0.357;AN=56;BaseQRankSum=10.443;DP=390;FS=4.228;HRun=0;HaplotypeScore=151.2890;InbreedingCoeff=0.7890;MQ=68.08;MQ0=2;MQRankSum=-8.278;QD=32.84;ReadPosRankSum=3.609;VQSLOD=3.3387;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:10,0:10:12.04:248,12,0	1/1:2,0:2:6.02:159,6,0	0/0:21,0:15:18.85:0,19,1076	0/0:24,0:19:34.27:0,34,1336	0/0:14,0:14:27.09:0,27,1049	0/0:18,0:18:45.15:0,45,2296	0/0:17,0:17:51.18:0,51,2344	1/1:2,4:6:18.02:424,18,0	0/1:5,0:5:99:190,0,108	0/0:19,0:19:45.15:0,45,1639	0/0:6,0:6:11.78:0,12,520	1/1:4,1:5:12.04:268,12,0	1/1:11,0:11:29.89:600,30,0	0/0:13,0:13:30.10:0,30,1311	1/1:9,0:9:27.08:474,27,0	0/1:16,0:16:40.98:41,0,1160	0/0:28,0:28:78.27:0,78,3706	0/0:20,0:19:33.11:0,33,1422	0/0:19,0:19:57:0,57,1757	0/0:17,0:17:41.94:0,42,976	0/0:28,0:28:20.65:0,21,565	1/1:5,4:9:8.63:161,9,0	1/1:14,1:15:30.10:590,30,0	1/1:8,0:8:8.69:204,9,0	0/0:12,0:12:33.09:0,33,1405	0/0:19,0:19:45.15:0,45,1770	0/0:12,0:12:24.08:0,24,993	0/0:6,0:6:18.06:0,18,794
chr10	46224501	.	G	GGGA	934.41	PASS	AB=0.556;AC=7;AF=0.125;AN=56;BaseQRankSum=-0.958;DP=397;FS=8.229;HRun=0;HaplotypeScore=127.7321;InbreedingCoeff=0.7508;MQ=68.83;MQ0=2;MQRankSum=-0.843;QD=11.98;ReadPosRankSum=0.625;VQSLOD=2.8719;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:12:0,12,111	0/0:2,0:2:6.01:0,6,57	0/0:22,0:16:32.75:0,33,414	0/0:23,0:18:41.08:0,41,453	0/0:14,0:14:23.84:0,24,281	0/0:18,0:18:45:0,45,542	0/0:19,0:19:48.80:0,49,667	0/0:6,0:6:14.36:0,14,98	0/0:5,0:5:12.01:0,12,122	0/0:19,0:19:30.05:0,30,385	0/0:6,0:6:12.04:0,12,182	0/0:5,0:5:12.02:0,12,115	0/0:11,0:11:27.04:0,27,257	0/0:13,0:13:30.09:0,30,422	0/0:9,0:9:27.04:0,27,257	0/0:16,0:16:32.29:0,32,438	0/0:28,0:28:78.17:0,78,1078	0/0:23,0:22:33.07:0,33,445	1/1:4,5:17:33.04:351,33,0	1/1:13,4:18:16.30:251,16,0	0/1:6,10:30:10.17:117,0,10	0/0:9,0:9:8.94:0,9,86	0/0:15,0:15:30.04:0,30,287	0/0:9,0:9:8.75:0,9,87	0/0:12,0:12:33.01:0,33,382	0/0:18,0:18:38.99:0,39,439	1/1:6,7:13:24.07:361,24,0	0/0:6,0:6:17.97:0,18,187
chr10	46224502	.	GGGGGGATC	G	2255.83	PASS	AB=0.917;AC=20;AF=0.357;AN=56;BaseQRankSum=10.779;DP=396;FS=1.827;HRun=0;HaplotypeScore=140.8510;InbreedingCoeff=0.7974;MQ=69.72;MQ0=3;MQRankSum=-9.291;QD=22.79;ReadPosRankSum=4.029;VQSLOD=3.2734;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,1:10:12.04:191,12,0	1/1:2,0:2:6.02:111,6,0	0/0:22,0:16:32.41:0,32,1000	0/0:23,0:18:42.15:0,42,1015	0/0:14,0:14:27.05:0,27,869	0/0:19,0:19:48.16:0,48,1980	0/0:22,0:22:66.21:0,66,2290	1/1:4,2:6:17.98:344,18,0	0/1:4,1:5:81.09:146,0,81	0/0:17,0:17:42.14:0,42,1349	0/0:5,0:5:11.78:0,12,428	1/1:5,0:5:12.04:165,12,0	1/1:11,0:11:27.56:386,28,0	0/0:13,0:13:30.10:0,30,1045	1/1:10,0:10:27.09:382,27,0	0/1:16,0:16:9.69:10,0,898	0/0:28,0:28:78.27:0,78,3115	0/0:22,0:21:42.14:0,42,1365	0/0:16,0:16:34.03:0,34,1281	0/0:17,0:17:30.94:0,31,812	0/0:31,0:31:17.83:0,18,469	1/1:9,0:9:9.03:123,9,0	1/1:15,0:15:30.09:469,30,0	1/1:9,1:9:8.76:134,9,0	0/0:12,0:12:33.09:0,33,1140	0/0:17,0:17:45.15:0,45,1442	0/0:13,0:13:27.02:0,27,846	0/0:6,0:6:18.06:0,18,649
chr10	46224504	.	GGGGATC	G	3623.53	PASS	AB=0.881;AC=21;AF=0.375;AN=56;BaseQRankSum=10.265;DP=400;FS=4.169;HRun=0;HaplotypeScore=127.4716;InbreedingCoeff=0.7322;MQ=71.37;MQ0=3;MQRankSum=-10.085;QD=31.24;ReadPosRankSum=3.761;VQSLOD=3.4176;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,12:13:12.04:282,12,0	1/1:0,2:2:6.02:139,6,0	0/0:23,0:17:24.53:0,25,817	0/0:21,0:17:43.53:0,44,896	0/0:14,0:14:24.08:0,24,640	0/0:22,0:22:57.20:0,57,1784	0/0:22,0:22:66.21:0,66,1886	1/1:6,0:6:15.94:289,16,0	0/1:3,2:5:53.19:185,0,53	0/0:17,0:17:45.15:0,45,1134	0/0:5,0:5:11.78:0,12,318	1/1:1,4:5:12.04:282,12,0	1/1:0,11:11:28.34:638,28,0	0/0:13,0:13:30.10:0,30,769	1/1:0,10:10:27.09:635,27,0	0/1:12,1:13:40.42:40,0,632	0/0:30,0:30:84.22:0,84,2539	0/0:22,0:21:51.18:0,51,1252	0/0:17,0:17:23.20:0,23,1144	0/1:17,0:17:4.58:5,0,663	0/0:30,0:30:12.34:0,12,343	1/1:4,5:9:9.03:212,9,0	1/1:2,13:15:30.10:705,30,0	1/1:2,8:9:8.89:211,9,0	0/0:11,0:11:33.09:0,33,874	0/0:17,0:17:48.16:0,48,1177	0/0:8,0:13:21.98:0,22,625	0/0:6,0:6:18.06:0,18,504
chr10	46225487	.	AG	A	7530.74	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=18.233;DP=727;FS=22.542;HRun=1;HaplotypeScore=83.3780;InbreedingCoeff=0.9992;MQ=85.52;MQ0=0;MQRankSum=-7.554;QD=38.62;ReadPosRankSum=3.163;VQSLOD=3.0072;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,31:31:90.30:1258,90,0	0/0:12,0:12:36.12:0,36,575	0/0:35,0:35:98.51:0,99,1584	0/0:27,0:27:57.86:0,58,1154	0/0:14,0:14:42.14:0,42,668	0/0:19,0:19:57.19:0,57,911	0/0:38,0:38:99:0,114,1795	0/0:37,0:37:99:0,111,1748	1/1:0,26:26:75.24:1047,75,0	0/0:22,0:21:66.23:0,66,1054	0/0:12,0:12:36.12:0,36,570	1/1:0,31:31:78.26:1089,78,0	1/1:0,31:31:90.30:1254,90,0	0/0:29,0:29:84.25:0,84,1292	0/0:29,0:29:87.30:0,87,1390	0/0:26,0:26:78.27:0,78,1247	0/0:25,0:25:75.26:0,75,1198	0/0:31,0:31:90.29:0,90,1405	0/0:23,0:23:69.22:0,69,1079	0/0:22,0:22:66.22:0,66,1048	0/0:50,0:50:99:0,147,2320	1/1:1,19:20:54.18:745,54,0	1/1:0,13:13:36.10:503,36,0	1/1:0,43:43:99:1636,117,0	0/0:21,0:21:63.21:0,63,1004	0/0:32,0:32:96.32:0,96,1512	0/0:21,0:21:63.17:0,63,953	0/0:7,0:7:21.07:0,21,335
chr10	46226559	.	T	TC	1755.94	PASS	AB=0.833;AC=9;AF=0.161;AN=56;BaseQRankSum=14.013;DP=633;FS=5.345;HRun=0;HaplotypeScore=131.6790;InbreedingCoeff=-0.1900;MQ=72.09;MQ0=3;MQRankSum=-12.305;QD=8.69;ReadPosRankSum=2.623;VQSLOD=3.8486;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:18,12:30:99:523,0,130	0/0:13,0:13:39.13:0,39,544	0/0:67,0:39:84.02:0,84,912	0/1:40,0:22:11.90:12,0,191	0/0:19,0:19:54.15:0,54,708	0/0:23,0:23:69.21:0,69,931	0/0:23,0:23:69.21:0,69,933	0/1:12,4:16:99:130,0,112	0/1:10,4:15:99:191,0,130	0/0:19,0:19:54.17:0,54,741	0/0:17,0:17:51.17:0,51,713	0/1:21,2:23:99:263,0,219	0/1:10,6:16:78.26:266,0,78	0/0:20,0:20:60.19:0,60,823	0/0:21,0:21:63.20:0,63,866	0/0:16,0:16:48.15:0,48,653	0/0:30,0:30:87.22:0,87,1136	0/0:30,0:30:90.30:0,90,1255	0/0:14,0:14:42.08:0,42,535	0/0:23,0:23:66.21:0,66,907	0/0:11,0:11:30.10:0,30,419	0/1:16,4:20:84.31:278,0,84	0/1:15,3:18:99:131,0,151	0/1:21,2:22:99:104,0,241	0/0:27,0:27:81.24:0,81,1097	0/0:22,0:22:63.19:0,63,836	0/0:21,0:21:63.19:0,63,850	0/0:15,0:15:45.13:0,45,592
chr10	46226562	.	TC	T	1533.56	PASS	AB=0.657;AC=8;AF=0.143;AN=56;BaseQRankSum=11.963;DP=637;FS=5.135;HRun=3;HaplotypeScore=134.0290;InbreedingCoeff=-0.0961;MQ=72.09;MQ0=3;MQRankSum=-12.152;QD=9.71;ReadPosRankSum=2.943;VQSLOD=1.4986;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:15,15:30:92.08:261,0,92	0/0:14,0:14:36.11:0,36,486	0/0:64,0:36:75.81:0,76,738	0/0:41,0:22:8.82:0,9,174	0/0:20,0:20:60.14:0,60,768	0/0:22,0:22:66.20:0,66,903	0/0:23,0:23:69.20:0,69,916	0/1:9,5:14:48.22:176,0,48	0/1:6,8:14:33.20:161,0,33	0/0:20,0:20:57.18:0,57,768	0/0:17,0:17:51.16:0,51,697	0/1:11,13:24:14.27:259,0,14	0/1:10,8:18:99:144,0,107	0/0:21,0:21:63.18:0,63,847	0/0:21,0:21:63.20:0,63,864	0/0:15,0:15:45.11:0,45,576	0/0:29,0:29:87.23:0,87,1159	0/0:32,0:32:87.25:0,87,1178	0/0:15,0:15:42.10:0,42,537	0/0:24,0:24:69.19:0,69,915	0/0:13,0:13:39.08:0,39,477	0/1:6,14:20:5.99:262,0,6	0/1:5,12:17:46.06:184,0,46	0/1:12,9:20:12.84:221,0,13	0/0:27,0:27:81.22:0,81,1064	0/0:23,0:23:66.18:0,66,836	0/0:23,0:23:66.14:0,66,847	0/0:15,0:15:45.12:0,45,586
chr10	46226572	.	T	TTCCTTTTTCTA	11764.59	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=9.880;DP=600;FS=2.236;HRun=0;HaplotypeScore=199.9313;InbreedingCoeff=0.9993;MQ=72.68;MQ0=3;MQRankSum=-12.219;QD=95.65;ReadPosRankSum=1.800;VQSLOD=4.5348;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,10:24:63.22:2523,63,0	0/0:13,0:13:39.12:0,39,1286	0/0:49,0:26:34.18:0,34,905	0/0:41,0:24:31.72:0,32,331	0/0:26,0:26:78.19:0,78,2062	0/0:20,0:20:60.19:0,60,2014	0/0:27,0:27:81.17:0,81,2273	1/1:15,0:15:42.10:842,42,0	1/1:5,4:9:27.09:1073,27,0	0/0:19,0:19:54.18:0,54,1803	0/0:17,0:17:48.15:0,48,1666	1/1:8,10:18:54.15:1949,54,0	1/1:11,5:16:48.14:1420,48,0	0/0:21,0:21:63.20:0,63,2051	0/0:22,0:22:66.16:0,66,2068	0/0:12,0:12:36.11:0,36,1202	0/0:29,0:29:87.27:0,87,2815	0/0:32,0:32:90.24:0,90,2909	0/0:19,0:19:51.12:0,51,1150	0/0:27,0:27:78.24:0,78,2496	0/0:11,0:11:33.11:0,33,990	1/1:7,9:16:45.14:1922,45,0	1/1:6,3:9:27.06:802,27,0	1/1:10,5:15:35.59:1233,36,0	0/0:31,0:31:87.23:0,87,2637	0/0:25,0:25:69.13:0,69,2016	0/0:24,0:24:69.21:0,69,2153	0/0:9,0:9:27.09:0,27,925
chr10	46227248	.	AATAGCTCCTT	A	11647.46	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=15.347;DP=604;FS=4.434;HRun=0;HaplotypeScore=193.4335;InbreedingCoeff=0.9950;MQ=81.60;MQ0=0;MQRankSum=-14.384;QD=73.25;ReadPosRankSum=1.202;VQSLOD=4.1810;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,138,7086	0/0:14,0:14:42.14:0,42,2032	0/0:24,0:24:72.14:0,72,3085	0/0:14,0:14:32.29:0,32,1240	1/1:0,17:17:36.12:1175,36,0	0/0:16,0:16:48.15:0,48,2334	0/0:18,0:18:54.15:0,54,2350	0/0:33,0:33:99:0,99,4756	0/0:14,0:14:42.14:0,42,2266	1/1:1,14:15:39.11:1059,39,0	1/1:0,17:17:39.13:1134,39,0	0/0:27,0:27:81.25:0,81,3960	0/0:23,0:23:69.24:0,69,3628	1/1:0,15:15:39.13:1294,39,0	0/0:25,0:25:75.26:0,75,3830	1/1:0,19:19:48.16:1628,48,0	0/0:31,0:31:93.30:0,93,4625	1/1:0,19:19:39.13:1280,39,0	0/0:22,0:22:63.19:0,63,2822	0/0:19,0:19:53.92:0,54,2507	0/0:28,0:28:81.24:0,81,3910	0/0:18,0:18:54.14:0,54,2603	0/0:14,0:14:42.14:0,42,1944	0/0:28,0:27:84.25:0,84,4209	1/1:3,27:30:63.22:1988,63,0	1/1:1,21:22:60.07:1683,60,0	0/0:28,0:27:84.27:0,84,3989	1/1:0,5:5:12.04:407,12,0
chr10	46229259	.	G	GA	10587.24	PASS	AB=0.611;AC=47;AF=0.839;AN=56;BaseQRankSum=-4.739;DP=680;FS=14.906;HRun=10;HaplotypeScore=93.3531;InbreedingCoeff=0.8784;MQ=68.14;MQ0=1;MQRankSum=-1.000;QD=18.29;ReadPosRankSum=6.099;VQSLOD=4.0027;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:9,0:38:46.71:318,47,0	1/1:2,10:12:20.60:224,21,0	0/0:23,0:20:28.62:0,29,246	0/0:12,0:10:4.57:0,5,49	1/1:8,20:29:56.94:576,57,0	1/1:1,20:21:54.14:576,54,0	1/1:4,11:17:32.78:317,33,0	0/0:29,0:32:80.99:0,81,633	1/1:3,0:24:39.80:199,40,0	0/1:8,14:22:1.18:384,0,1	1/1:7,18:26:56.90:566,57,0	1/1:4,0:26:32.60:252,33,0	1/1:5,0:14:17.15:86,17,0	1/1:4,23:29:50.86:509,51,0	1/1:5,17:23:25.22:441,25,0	1/1:8,25:33:57.04:608,57,0	0/0:31,0:31:79.92:0,80,643	1/1:3,25:28:53.68:775,54,0	1/1:7,23:30:49.17:684,49,0	1/1:7,21:28:63.12:659,63,0	1/1:1,11:12:30.08:320,30,0	1/1:2,2:16:30.79:167,31,0	1/1:5,1:18:38.41:206,38,0	1/1:4,1:23:48.49:260,48,0	1/1:6,21:29:35.16:548,35,0	1/1:8,28:35:81.16:845,81,0	1/1:7,26:34:74.94:780,75,0	1/1:2,9:11:26.93:287,27,0
chr10	46230922	.	AT	A	1075.65	PASS	AB=0.935;AC=12;AF=0.214;AN=56;BaseQRankSum=7.454;DP=588;FS=5.484;HRun=12;HaplotypeScore=95.4135;InbreedingCoeff=0.7620;MQ=66.73;MQ0=1;MQRankSum=1.007;QD=6.60;ReadPosRankSum=-0.011;VQSLOD=2.4722;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:37:66.67:0,67,348	1/1:1,0:10:18.33:53,18,0	0/1:12,0:12:26.12:26,0,103	0/0:10,0:8:11.78:0,12,93	0/0:24,0:26:44.09:0,44,465	1/1:3,22:26:51.63:477,52,0	1/1:6,15:21:35.83:278,36,0	1/1:0,0:42:81.95:240,82,0	0/0:4,0:17:31.40:0,31,168	0/0:29,0:31:77.03:0,77,726	0/0:16,0:16:33.54:0,34,336	0/0:0,0:17:31.25:0,31,158	0/0:6,0:20:37.49:0,37,224	0/0:22,1:24:36.05:0,36,580	1/1:2,0:31:55:159,55,0	0/0:19,0:20:50.91:0,51,493	0/0:17,0:19:41.90:0,42,401	0/1:17,3:20:24.62:25,0,320	0/0:19,0:19:31.56:0,32,168	0/0:30,0:30:48.04:0,48,326	0/0:13,0:13:27.15:0,27,133	0/0:1,0:19:48.83:0,49,263	0/0:4,0:13:17.35:0,17,102	0/0:1,0:13:28.41:0,28,144	0/0:14,1:16:6.64:0,7,226	0/0:23,2:25:45.90:0,46,647	0/0:30,0:29:63.63:0,64,351	0/0:8,0:9:23.87:0,24,220
chr10	46231253	.	G	GCTCTCGCTCT	4042.44	PASS	AB=0.967;AC=24;AF=0.429;AN=56;BaseQRankSum=9.898;DP=665;FS=3.276;HRun=0;HaplotypeScore=222.6003;InbreedingCoeff=0.0958;MQ=67.99;MQ0=8;MQRankSum=0.741;QD=9.62;ReadPosRankSum=-2.439;VQSLOD=2.4601;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:27:37.78:322,38,0	0/0:3,0:3:8.99:0,9,76	0/0:26,0:20:41.21:0,41,458	0/0:29,0:20:31.80:0,32,377	0/1:20,0:20:99:128,0,114	0/1:21,0:21:44.81:45,0,213	0/0:17,0:23:45.37:0,45,552	0/0:46,0:45:39.40:0,39,894	1/1:39,0:39:76.38:704,76,0	0/1:24,0:24:99:274,0,190	0/1:14,0:14:28.15:28,0,73	1/1:24,0:24:47.33:475,47,0	1/1:17,0:17:36.32:473,36,0	0/1:30,0:30:45.50:46,0,227	0/0:23,0:27:31.98:0,32,998	0/0:19,0:19:43.86:0,44,283	0/0:23,0:32:80.76:0,81,979	0/1:18,0:16:99:289,0,122	0/1:19,0:19:65.86:66,0,289	0/0:29,0:28:4.17:0,4,313	0/1:28,0:28:99:133,0,313	1/1:25,0:25:44.66:344,45,0	1/1:18,0:18:12.84:86,13,0	0/1:9,15:27:42.57:76,0,43	0/1:25,0:25:99:144,0,148	0/1:26,0:26:99:340,0,201	0/1:18,0:18:69.15:69,0,229	0/0:10,0:9:23.63:0,24,151
chr10	46231257	.	T	TCG	1561.49	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=10.415;DP=691;FS=19.836;HRun=0;HaplotypeScore=124.7362;InbreedingCoeff=0.7342;MQ=65.74;MQ0=11;MQRankSum=0.240;QD=6.88;ReadPosRankSum=1.874;VQSLOD=2.1890;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:36,0:36:15.15:251,15,0	0/0:5,0:5:14.97:0,15,122	0/0:25,0:19:41.21:0,41,458	0/0:28,0:19:33.21:0,33,380	0/1:21,0:21:1.20:1,0,158	0/0:22,0:21:25.46:0,25,296	0/0:30,0:28:5.77:0,6,416	0/0:44,0:43:99:0,101,1020	1/1:37,1:38:75.15:544,75,0	0/0:25,0:25:65.98:0,66,407	0/1:14,0:14:0.15:0,0,75	1/1:27,1:28:38.89:300,39,0	1/1:15,2:17:32.30:246,32,0	0/0:30,0:30:39.92:0,40,272	0/0:32,0:32:63.74:0,64,661	0/0:19,0:19:43.27:0,43,270	0/0:34,0:34:86.56:0,87,685	0/0:18,0:16:33.51:0,34,221	0/0:19,0:19:35.41:0,35,393	0/0:25,0:24:30.28:0,30,340	0/0:27,0:27:10.39:0,10,364	1/1:30,0:30:43.87:319,44,0	0/1:19,0:19:10.05:70,0,10	1/1:24,0:24:0.63:4,1,0	0/0:23,0:23:20.77:0,21,202	0/0:26,0:26:22.85:0,23,329	0/0:21,0:20:18.07:0,18,321	0/0:11,0:9:23.63:0,24,151
chr10	46232721	.	GC	G	1388.58	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=2.824;DP=741;FS=7.646;HRun=1;HaplotypeScore=129.9484;InbreedingCoeff=0.9994;MQ=81.90;MQ0=0;MQRankSum=-2.924;QD=36.54;ReadPosRankSum=0.118;VQSLOD=2.5183;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,102,1367	1/1:0,12:12:36.12:503,36,0	0/0:23,0:23:69.23:0,69,1084	0/0:19,0:19:54.65:0,55,847	0/0:29,0:29:87.30:0,87,1387	0/0:16,0:16:48.16:0,48,763	0/0:32,0:32:96.33:0,96,1533	0/0:20,0:19:60.20:0,60,939	0/0:30,0:30:88.14:0,88,1160	0/0:39,0:39:99:0,117,1851	0/0:19,0:19:57.19:0,57,911	0/0:31,0:31:93.31:0,93,1274	0/0:22,0:22:63.68:0,64,861	0/0:24,0:24:72.24:0,72,1139	1/1:0,26:26:72.24:1007,72,0	0/0:23,0:23:69.24:0,69,1099	0/0:48,0:48:99:0,144,2297	0/0:26,0:26:75.26:0,75,1195	0/0:23,0:23:69.22:0,69,1079	0/0:33,0:33:99:0,99,1581	0/0:22,0:22:66.22:0,66,1051	0/0:33,0:33:93.26:0,93,1260	0/0:20,0:20:60.14:0,60,785	0/0:30,0:30:84.28:0,84,1169	0/0:27,0:26:81.27:0,81,1273	0/0:37,0:37:99:0,111,1772	0/0:28,0:28:84.26:0,84,1296	0/0:9,0:9:27.09:0,27,432
chr10	46232843	.	A	AT	9595.70	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=1.456;DP=796;FS=0.939;HRun=0;HaplotypeScore=103.4844;InbreedingCoeff=0.9971;MQ=88.45;MQ0=0;MQRankSum=-4.996;QD=42.27;ReadPosRankSum=4.173;VQSLOD=4.8140;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,42:43:99:1870,117,0	0/0:15,0:15:45.15:0,45,629	0/0:24,0:24:66.19:0,66,874	0/0:38,0:38:99:0,104,1367	0/0:26,0:26:78.25:0,78,1074	0/0:19,0:19:54.16:0,54,687	0/0:40,0:40:99:0,120,1553	0/0:30,0:30:87.28:0,87,1189	1/1:1,28:29:75.26:1198,75,0	0/0:30,0:30:90.30:0,90,1259	0/0:22,0:22:66.21:0,66,905	1/1:1,28:29:84.29:1340,84,0	1/1:1,24:26:69.24:1096,69,0	0/0:26,0:26:78.26:0,78,1091	0/0:33,0:33:99:0,99,1366	0/0:39,0:39:99:0,117,1637	0/0:46,0:46:99:0,138,1929	0/0:21,0:21:63.21:0,63,881	0/0:19,0:19:54.17:0,54,683	0/0:24,0:24:66.21:0,66,857	0/0:31,0:31:87.28:0,87,1129	1/1:0,28:28:66.23:1055,66,0	1/1:0,30:30:84.29:1341,84,0	1/1:2,39:41:39.51:1696,40,0	0/0:14,0:14:42.13:0,42,570	0/0:34,0:34:99:0,102,1399	0/0:33,0:32:90.29:0,90,1166	0/0:5,0:5:15.05:0,15,210
chr10	46233143	.	A	ACAAAG	15042.03	PASS	AB=0.955;AC=15;AF=0.268;AN=56;BaseQRankSum=-10.450;DP=814;FS=0.657;HRun=0;HaplotypeScore=147.6486;InbreedingCoeff=0.9090;MQ=85.42;MQ0=0;MQRankSum=-6.645;QD=57.63;ReadPosRankSum=2.714;VQSLOD=5.5703;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,41:49:96.33:2926,96,0	0/0:18,0:18:54.19:0,54,1129	0/0:18,0:18:38.77:0,39,668	0/0:37,0:37:93.26:0,93,1736	0/0:30,0:30:90.31:0,90,1882	0/0:18,0:18:51.18:0,51,1071	0/0:36,0:36:99:0,108,2130	0/0:27,0:27:78.25:0,78,1505	1/1:1,24:30:48.16:1500,48,0	0/0:30,0:30:87.28:0,87,1787	0/0:34,0:34:93.28:0,93,1857	1/1:2,19:29:57.15:1695,57,0	1/1:3,33:40:90.10:2801,90,0	0/0:22,0:22:60.20:0,60,1226	0/0:34,0:34:96.33:0,96,2010	0/1:20,1:21:30.30:30,0,1159	0/0:47,0:47:99:0,135,2747	0/0:28,0:28:78.23:0,78,1599	0/0:12,0:12:36.10:0,36,711	0/0:29,0:29:87.28:0,87,1725	0/0:38,0:38:99:0,108,2127	1/1:1,26:29:72.03:2022,72,0	1/1:2,25:29:69.24:2104,69,0	1/1:1,29:34:63.21:1964,63,0	0/0:25,0:25:75.22:0,75,1520	0/0:30,0:30:90.30:0,90,1865	0/0:24,0:24:66.23:0,66,1400	0/0:16,0:16:48.16:0,48,992
chr10	46233345	.	T	TTTTG	9196.84	PASS	AB=0.613;AC=17;AF=0.304;AN=56;BaseQRankSum=-15.205;DP=665;FS=0.376;HRun=0;HaplotypeScore=117.8212;InbreedingCoeff=0.9147;MQ=70.70;MQ0=0;MQRankSum=-0.136;QD=46.68;ReadPosRankSum=2.259;VQSLOD=5.6818;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:90.29:0,90,1461	0/0:9,0:9:21.07:0,21,347	0/0:17,0:17:18.06:0,18,283	0/0:28,0:24:32.14:0,32,500	1/1:14,15:30:45.15:1103,45,0	0/0:29,0:29:66.22:0,66,1063	0/0:25,0:25:51.16:0,51,815	0/0:35,0:35:60.16:0,60,875	0/0:23,0:23:45.14:0,45,719	1/1:7,18:26:60.20:1444,60,0	1/1:7,16:23:45.11:1032,45,0	0/0:20,0:20:45.15:0,45,743	0/0:34,0:34:72.25:0,72,1187	1/1:9,15:25:42.14:1030,42,0	0/0:29,0:29:66.20:0,66,1043	1/1:4,21:26:57.19:1397,57,0	0/0:17,0:17:33.11:0,33,541	0/1:7,12:19:16.45:702,0,16	0/0:27,0:26:45.15:0,45,730	0/0:25,0:25:63.20:0,63,1014	0/0:27,0:27:66.21:0,66,1067	0/0:23,0:23:42.13:0,42,669	0/0:17,0:17:42.14:0,42,694	0/0:19,0:19:42.10:0,42,659	1/1:3,12:16:30.10:735,30,0	1/1:5,17:24:57.18:1240,57,0	0/0:25,0:25:66.19:0,66,1040	1/1:1,7:8:21.07:515,21,0
chr10	46234064	.	G	GCT	723.42	PASS	AB=1.000;AC=15;AF=0.625;AN=24;BaseQRankSum=0.000;DP=84;FS=8.226;HRun=0;HaplotypeScore=46.8673;InbreedingCoeff=0.4049;MQ=78.38;MQ0=3;MQRankSum=-2.428;QD=10.19;ReadPosRankSum=3.067;VQSLOD=1.7903;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:18:32.72:378,33,0	./.	0/1:11,0:4:15.57:25,0,16	0/0:7,0:4:4.88:0,5,32	./.	0/0:2,0:2:3.01:0,3,42	0/0:2,0:2:3.89:0,4,36	0/0:1,0:1:3.01:0,3,30	1/1:8,0:8:11.63:141,12,0	./.	./.	1/1:7,0:7:11.88:140,12,0	1/1:6,0:6:9.03:105,9,0	./.	./.	./.	./.	./.	./.	./.	./.	1/1:1,6:7:0.47:1,0,0	1/1:4,0:4:2.62:15,3,0	1/1:10,0:10:2.62:23,3,0	./.	./.	./.	./.
chr10	46234842	.	CAT	C	1920.64	PASS	AB=0.538;AC=13;AF=0.241;AN=54;BaseQRankSum=2.135;DP=213;FS=0.000;HRun=0;HaplotypeScore=64.3991;InbreedingCoeff=0.7537;MQ=85.63;MQ0=0;MQRankSum=-5.605;QD=30.49;ReadPosRankSum=2.304;VQSLOD=5.2257;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,14:14:36.12:529,36,0	0/0:2,0:2:6.02:0,6,116	0/0:11,0:11:33.11:0,33,624	0/0:12,0:12:26.66:0,27,491	0/0:5,0:5:15.05:0,15,280	0/0:5,0:5:15.05:0,15,281	0/0:7,0:7:21.07:0,21,405	0/0:22,0:22:66.23:0,66,1252	1/1:3,3:6:12.04:175,12,0	0/0:10,0:10:30.10:0,30,572	0/0:5,0:5:15.05:0,15,281	0/1:2,12:14:27.65:383,0,28	1/1:2,5:7:12.04:184,12,0	0/0:4,0:4:11.93:0,12,181	0/0:4,0:4:12.04:0,12,231	0/0:6,0:6:9.03:0,9,173	0/0:4,0:4:6.02:0,6,116	0/0:1,0:1:3.01:0,3,57	0/0:12,0:12:33.11:0,33,631	0/0:5,0:5:15.05:0,15,272	0/0:14,0:14:36.12:0,36,658	1/1:0,11:11:30.10:436,30,0	1/1:0,8:8:20.97:310,21,0	1/1:1,2:3:6.02:81,6,0	0/0:7,0:7:21.07:0,21,393	0/0:11,0:11:33.11:0,33,637	0/0:3,0:3:9.03:0,9,158	./.
chr10	46235643	.	G	GT	8242.82	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=19.128;DP=798;FS=1.321;HRun=2;HaplotypeScore=107.0374;InbreedingCoeff=0.9970;MQ=85.45;MQ0=0;MQRankSum=-6.872;QD=37.13;ReadPosRankSum=4.659;VQSLOD=4.7769;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,52:55:99:2149,151,0	0/0:6,0:6:15.02:0,15,160	0/0:26,0:26:66.93:0,67,849	0/0:32,0:32:83.89:0,84,942	0/0:25,0:24:63.18:0,63,747	0/0:20,0:20:54.17:0,54,668	0/0:47,0:47:99:0,126,1560	0/0:30,0:30:84.22:0,84,995	1/1:3,26:29:75.25:1064,75,0	0/0:28,0:27:75.23:0,75,915	0/0:14,0:14:42.11:0,42,490	1/1:1,35:36:93.31:1339,93,0	1/1:2,22:24:57.19:821,57,0	0/0:25,0:25:69.22:0,69,853	0/0:48,0:48:99:0,144,1759	0/0:24,0:24:72.22:0,72,880	0/0:41,0:40:99:0,120,1475	0/0:23,0:23:66.17:0,66,800	0/0:26,0:26:72.17:0,72,850	0/0:18,0:18:51.14:0,51,617	0/0:50,0:50:99:0,144,1732	1/1:3,18:21:45.11:624,45,0	1/1:0,12:12:30.10:432,30,0	1/1:2,43:45:99:1814,126,0	0/0:15,0:15:45.10:0,45,529	0/0:20,0:20:60.12:0,60,685	0/0:41,0:41:99:0,120,1471	0/0:17,0:17:51.11:0,51,602
chr10	46235911	.	G	GA	2437.53	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=9.553;DP=560;FS=0.498;HRun=7;HaplotypeScore=115.0464;InbreedingCoeff=0.8338;MQ=45.60;MQ0=42;MQRankSum=-3.345;QD=16.36;ReadPosRankSum=-2.297;VQSLOD=2.6453;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,21:25:39.08:449,39,0	0/0:10,0:10:18.02:0,18,170	0/0:44,0:2:3:0,3,29	0/0:52,0:6:8.68:0,9,86	0/0:26,0:25:23.54:0,24,217	0/0:19,0:18:42.03:0,42,403	0/0:21,0:21:11.92:0,12,111	0/0:23,0:22:41.46:0,41,379	1/1:4,12:16:35.99:386,36,0	0/0:16,0:16:31.49:0,31,302	0/0:18,0:18:26.51:0,27,259	1/1:8,8:15:27.01:272,27,0	1/1:8,11:19:39.06:414,39,0	0/0:10,0:10:7.91:0,8,85	0/0:17,0:17:19.24:0,19,200	0/1:14,0:14:3.19:3,0,47	0/0:27,0:26:41.11:0,41,380	0/0:16,0:14:17.22:0,17,154	0/0:15,0:13:30.04:0,30,290	0/0:20,0:20:32.99:0,33,307	0/0:16,0:14:5.14:0,5,106	1/1:6,15:19:33.10:398,33,0	1/1:9,14:22:42.07:472,42,0	1/1:6,9:15:21.02:237,21,0	0/0:16,0:16:23.69:0,24,231	0/0:19,0:19:31.58:0,32,293	0/0:14,0:13:4.98:0,5,105	0/0:10,0:10:17.93:0,18,161
chr10	46235938	.	A	AG	1494.24	PASS	AB=0.947;AC=21;AF=0.375;AN=56;BaseQRankSum=2.352;DP=502;FS=1.552;HRun=0;HaplotypeScore=126.2561;InbreedingCoeff=0.7787;MQ=60.02;MQ0=9;MQRankSum=1.151;QD=8.12;ReadPosRankSum=4.700;VQSLOD=3.8595;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:22,2:24:42.32:260,42,0	0/0:17,0:17:31.39:0,31,305	0/0:15,0:7:17.01:0,17,146	0/0:16,0:11:15.78:0,16,111	0/0:25,0:24:41.90:0,42,261	0/0:15,0:15:34.19:0,34,368	0/0:21,0:21:49.59:0,50,544	0/0:25,0:25:46.76:0,47,449	1/1:13,0:13:10.75:77,11,0	0/0:29,0:28:58.57:0,59,372	0/0:19,0:19:34.48:0,34,212	0/1:13,0:12:29.31:85,0,29	0/1:13,3:16:18.48:101,0,18	0/0:11,0:11:20.85:0,21,148	0/0:16,0:16:34:0,34,348	0/0:20,0:20:43.47:0,43,280	0/0:28,0:27:60.46:0,60,670	0/1:20,0:18:0.71:1,0,69	1/1:8,2:10:20.51:134,21,0	1/1:7,5:13:22.94:207,23,0	1/1:4,12:15:12:132,12,0	1/1:11,0:9:16.30:87,16,0	1/1:20,2:20:34.85:260,35,0	1/1:11,1:12:15.50:101,15,0	0/0:18,0:18:25.21:0,25,127	0/0:31,0:31:60.93:0,61,322	1/1:6,7:12:27.81:256,28,0	0/0:12,0:11:10.12:0,10,80
chr10	46236079	.	GGAGAGAGAGAGAGAGAGAGAGAGAGA	G	338.31	PASS	AB=1.000;AC=3;AF=0.056;AN=54;BaseQRankSum=2.752;DP=493;FS=3.260;HRun=0;HaplotypeScore=245.0110;InbreedingCoeff=0.5194;MQ=58.37;MQ0=21;MQRankSum=-0.993;QD=6.63;ReadPosRankSum=1.060;VQSLOD=2.3194;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:27.08:0,27,1208	0/0:4,0:4:9.03:0,9,507	0/1:34,0:19:0:0,0,0	0/0:38,0:14:1.25:0,1,3	0/0:19,0:17:15.05:0,15,920	0/0:14,0:14:3.01:0,3,244	0/0:20,0:19:16.30:0,16,760	0/0:34,0:34:37.71:0,38,1569	0/0:13,0:15:18.05:0,18,1033	0/0:16,0:14:27.07:0,27,1373	0/0:14,0:14:12.04:0,12,871	0/0:14,0:11:15.05:0,15,918	0/0:10,0:10:18.06:0,18,1149	0/0:8,0:7:6.02:0,6,452	1/1:12,5:16:8.98:421,9,0	0/0:13,0:12:12.04:0,12,823	0/0:10,0:10:15.03:0,15,668	0/0:14,0:14:18.06:0,18,888	0/0:18,0:17:23.66:0,24,1225	0/0:17,0:17:20.09:0,20,1326	0/0:33,0:29:28.65:0,29,2186	0/0:13,0:12:9.03:0,9,608	./.	0/0:22,0:22:30.07:0,30,1787	0/0:15,0:14:18.06:0,18,1168	0/0:22,0:21:30.10:0,30,2015	0/0:12,0:8:3.01:0,3,142	0/0:7,0:6:11.89:0,12,527
chr10	46238241	.	CAAAAA	C	1083.96	PASS	AB=0.932;AC=22;AF=0.393;AN=56;BaseQRankSum=4.736;DP=510;FS=3.060;HRun=15;HaplotypeScore=113.9225;InbreedingCoeff=-0.2904;MQ=65.92;MQ0=15;MQRankSum=-1.338;QD=3.19;ReadPosRankSum=-2.032;VQSLOD=0.0660;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:23:21.49:57,0,21	0/0:5,0:6:12.01:0,12,242	0/1:58,0:21:1.74:2,0,53	0/0:66,0:20:4.51:0,5,140	0/1:27,0:27:25.15:25,0,82	0/1:15,0:15:10.05:78,0,10	0/1:12,0:14:53.80:54,0,101	1/1:7,25:32:69.59:615,70,0	0/1:9,0:10:38.55:53,0,39	0/0:14,0:14:0.66:0,1,112	0/1:11,0:11:3.36:3,0,76	0/1:6,0:8:11.93:12,0,34	0/1:10,0:10:0.26:80,0,0	0/0:15,0:14:18.42:0,18,240	0/0:15,0:14:39.06:0,39,699	0/0:12,0:12:11.93:0,12,91	0/0:15,0:23:7.41:0,7,265	0/1:20,0:19:21.95:22,0,108	0/1:6,0:9:22.78:23,0,76	0/0:19,0:18:17.87:0,18,129	0/1:7,0:7:7.22:7,0,27	0/1:8,0:9:5.83:6,0,83	0/1:7,0:11:12.88:13,0,67	0/1:17,0:18:13.63:14,0,23	0/1:15,0:14:34.58:35,0,42	0/1:15,0:15:28.07:28,0,85	0/1:19,0:21:64.38:64,0,168	1/1:5,0:5:8.76:51,9,0
chr10	46238250	.	AAAAAAAG	A	3226.07	PASS	AB=0.966;AC=30;AF=0.536;AN=56;BaseQRankSum=2.737;DP=535;FS=13.295;HRun=0;HaplotypeScore=124.3736;InbreedingCoeff=-0.0314;MQ=62.75;MQ0=17;MQRankSum=-2.671;QD=9.81;ReadPosRankSum=1.289;VQSLOD=1.9977;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:7,24:30:5.77:276,0,6	0/0:5,0:5:14.27:0,14,307	0/0:61,0:19:4.24:0,4,126	0/0:69,0:19:23.85:0,24,223	0/1:24,0:24:18.30:241,0,18	0/1:16,0:16:3.96:124,0,4	0/1:15,0:15:73.09:114,0,73	0/0:40,0:39:91.96:0,92,834	1/1:3,10:13:14.35:229,14,0	0/1:12,0:12:52.05:124,0,52	0/1:9,0:9:44.39:78,0,44	1/1:5,1:5:15.01:171,15,0	1/1:2,6:8:15.04:286,15,0	0/1:13,0:13:33.35:62,0,33	0/0:21,0:20:38.98:0,39,896	0/0:10,0:10:9.97:0,10,42	0/1:19,0:21:79.46:115,0,79	0/1:24,0:22:81.67:126,0,82	0/1:10,0:10:19.70:83,0,20	0/1:18,0:17:38.37:75,0,38	0/1:5,0:5:5.01:23,0,5	1/1:3,10:13:5.73:121,6,0	1/1:10,1:11:23.57:266,24,0	1/1:3,11:14:4.59:75,5,0	0/1:16,0:15:41.52:116,0,42	1/1:20,0:20:22.36:381,22,0	0/1:21,0:21:74.52:186,0,75	1/1:8,0:8:9.03:133,9,0
chr10	46238251	.	AAAAAAGAAAAG	A	4025.97	PASS	AB=0.828;AC=23;AF=0.411;AN=56;BaseQRankSum=-4.950;DP=538;FS=19.612;HRun=0;HaplotypeScore=149.6781;InbreedingCoeff=0.3843;MQ=62.76;MQ0=17;MQRankSum=0.382;QD=18.05;ReadPosRankSum=-2.472;VQSLOD=1.1988;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:30:10.20:0,10,163	0/0:5,0:5:13.81:0,14,446	0/0:61,0:17:15.38:0,15,169	0/0:67,0:19:26.77:0,27,283	1/1:5,19:24:11.69:492,12,0	0/0:4,0:16:17.97:0,18,177	0/0:11,0:15:19.78:0,20,422	0/0:39,0:38:97.95:0,98,1959	0/1:12,0:13:7.60:8,0,48	0/1:4,8:12:3.09:317,0,3	0/1:1,8:9:5.41:219,0,5	0/1:6,0:5:1.90:2,0,48	0/0:7,0:8:3.26:0,3,14	1/1:14,2:18:46.93:772,47,0	0/0:21,0:20:39:0,39,1256	1/1:3,7:10:8.01:76,8,0	1/1:19,1:20:17.56:355,18,0	0/1:11,13:22:38.23:322,0,38	0/1:9,0:10:36.59:37,0,122	0/0:5,0:17:6.81:0,7,377	0/1:4,0:5:11.86:12,0,18	0/1:13,0:13:13.70:14,0,75	0/0:11,0:11:15.96:0,16,190	0/1:14,0:14:1.39:1,0,2	1/1:4,12:15:8.90:280,9,0	1/1:1,19:20:53.01:842,53,0	0/0:16,0:21:15.90:0,16,565	1/1:0,8:8:9.03:279,9,0
chr10	46238252	.	A	AAAAAG	548.07	PASS	AB=0.990;AC=10;AF=0.185;AN=54;BaseQRankSum=-1.457;DP=552;FS=6.954;HRun=0;HaplotypeScore=137.6010;InbreedingCoeff=0.2552;MQ=63.07;MQ0=17;MQRankSum=-0.245;QD=2.88;ReadPosRankSum=1.284;VQSLOD=2.2178;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:30:4.59:5,0,78	1/1:1,4:5:6.02:160,6,0	1/1:63,0:17:1.63:5,2,0	0/0:77,0:22:1.30:0,1,10	0/0:23,0:24:8.89:0,9,86	0/0:13,0:14:15.04:0,15,174	0/0:13,0:15:19.71:0,20,180	0/0:39,0:38:47.74:0,48,475	0/0:13,0:13:12.02:0,12,160	0/0:12,0:12:3.95:0,4,37	0/0:9,0:9:6:0,6,53	0/0:6,0:5:6.01:0,6,61	0/0:8,0:8:12.02:0,12,128	0/1:22,0:21:28.98:59,0,29	1/1:8,11:20:18.06:420,18,0	./.	0/1:23,0:24:25.67:26,0,72	0/1:23,0:22:2.62:3,0,165	0/0:7,0:10:6.49:0,6,70	0/0:18,0:17:14.88:0,15,105	0/0:5,0:5:2.22:0,2,7	0/0:13,0:13:3.01:0,3,35	0/0:11,0:11:11.86:0,12,115	0/0:14,0:14:2.84:0,3,35	0/0:16,0:15:9.02:0,9,92	0/0:19,0:19:13.90:0,14,127	0/0:20,0:21:25.40:0,25,255	0/0:8,0:8:9.03:0,9,105
chr10	46238256	.	AG	A	2382.09	PASS	AB=0.987;AC=36;AF=0.643;AN=56;BaseQRankSum=2.333;DP=537;FS=4.280;HRun=1;HaplotypeScore=91.4087;InbreedingCoeff=0.2543;MQ=60.18;MQ0=18;MQRankSum=-1.762;QD=7.15;ReadPosRankSum=-0.152;VQSLOD=0.6520;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:31,0:30:3.70:60,4,0	0/0:5,0:5:12.89:0,13,75	0/0:58,2:16:16.34:0,16,158	0/0:73,0:18:6.21:0,6,137	0/1:23,0:23:4.26:133,0,4	1/1:13,0:13:15.76:85,16,0	0/1:14,0:14:3.76:148,0,4	0/0:42,0:41:95.03:0,95,776	1/1:12,0:12:5.91:44,6,0	0/1:9,0:9:10.58:125,0,11	0/1:9,0:9:9.60:51,0,10	0/1:9,0:8:1.18:101,0,1	1/1:8,0:8:8.81:60,9,0	1/1:19,2:20:49.33:366,49,0	0/0:22,0:21:19.91:0,20,228	0/1:9,1:10:9.08:15,0,9	0/1:26,0:26:10.21:232,0,10	0/1:21,1:20:2.54:52,0,3	1/1:10,0:9:9.67:97,10,0	1/1:15,1:15:18.85:150,19,0	1/1:5,1:6:3.98:40,4,0	1/1:11,1:12:7.67:62,8,0	0/1:9,0:9:3.21:89,0,3	0/1:13,0:13:5:12,0,5	1/1:13,0:12:8.39:39,8,0	1/1:19,0:19:31.58:283,32,0	1/1:18,1:20:30.56:272,31,0	1/1:8,0:8:8.39:39,8,0
chr10	46238877	.	AC	A	1245.67	PASS	AB=0.798;AC=7;AF=0.125;AN=56;BaseQRankSum=8.879;DP=1066;FS=0.485;HRun=5;HaplotypeScore=185.2542;InbreedingCoeff=-0.1431;MQ=54.22;MQ0=21;MQRankSum=-0.458;QD=3.88;ReadPosRankSum=3.661;VQSLOD=-0.6055;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:37,14:44:99:307,0,687	0/0:22,0:20:57.18:0,57,761	0/0:17,0:10:24.05:0,24,297	0/0:26,0:17:45.11:0,45,557	0/0:30,0:29:63.21:0,63,851	0/0:47,0:42:93.22:0,93,1216	0/0:49,0:43:99:0,114,1499	0/0:75,0:65:99:0,169,2262	0/1:32,16:39:99:265,0,881	0/0:37,0:32:87.24:0,87,1138	0/0:15,0:14:36.09:0,36,460	0/1:38,11:39:99:163,0,1036	0/1:39,10:41:99:141,0,900	0/0:46,0:41:99:0,102,1363	0/0:68,0:57:99:0,147,1933	0/0:51,0:43:99:0,111,1393	0/0:43,0:41:99:0,117,1583	0/0:36,0:34:93.31:0,93,1271	0/0:11,0:10:30.10:0,30,410	0/0:9,0:9:23.44:0,23,295	0/0:27,0:26:60.19:0,60,805	0/1:34,5:39:71.32:71,0,891	0/1:18,10:27:99:178,0,391	0/1:41,16:52:99:251,0,1102	0/0:27,0:23:45.13:0,45,597	0/0:56,0:53:99:0,138,1885	0/0:28,0:25:63.21:0,63,855	0/0:24,0:23:57.19:0,57,779
chr10	46238991	.	TATAG	T	706.61	PASS	AB=0.901;AC=12;AF=0.214;AN=56;BaseQRankSum=7.071;DP=929;FS=0.800;HRun=0;HaplotypeScore=182.0989;InbreedingCoeff=-0.1438;MQ=36.05;MQ0=82;MQRankSum=-4.505;QD=1.65;ReadPosRankSum=1.820;VQSLOD=2.4798;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:41,2:34:17.94:18,0,348	0/0:19,0:13:18.06:0,18,475	0/0:16,0:5:12.04:0,12,213	0/0:24,0:3:9.03:0,9,177	0/0:39,1:35:11.43:0,11,295	0/0:24,2:19:18.06:0,18,441	0/1:31,5:28:80.19:80,0,883	0/0:35,0:30:75.23:0,75,1809	0/1:23,4:21:99:120,0,903	0/0:43,2:33:69.24:0,69,1682	1/1:35,2:30:2.64:18,3,0	0/1:41,2:24:35.57:36,0,1134	0/1:40,3:27:5.73:6,0,1136	0/1:42,13:45:99:215,0,1084	0/0:62,0:43:72.25:0,72,1896	0/1:39,1:29:4:4,0,1162	0/1:23,4:23:56.14:56,0,1190	0/1:22,4:22:99:176,0,707	0/0:18,0:13:36.12:0,36,940	0/0:17,0:14:15.05:0,15,350	0/0:15,3:16:8.38:0,8,113	0/0:37,1:23:8.64:0,9,225	0/0:22,0:13:5.80:0,6,152	0/0:22,6:24:36:0,36,925	0/0:36,0:23:8.77:0,9,175	0/1:46,5:39:99:121,0,2121	0/0:41,0:32:40.11:0,40,1464	0/0:14,0:11:6.02:0,6,157
chr10	46239033	.	AG	A	4966.84	PASS	AB=0.818;AC=43;AF=0.827;AN=52;BaseQRankSum=1.377;DP=400;FS=12.056;HRun=4;HaplotypeScore=106.5484;InbreedingCoeff=0.6086;MQ=40.78;MQ0=15;MQRankSum=-2.112;QD=14.69;ReadPosRankSum=4.102;VQSLOD=3.4090;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:7,2:7:0.04:63,0,0	1/1:1,4:4:12.04:142,12,0	0/0:24,0:12:17.97:0,18,217	0/0:15,0:7:8.99:0,9,101	1/1:3,8:11:6.01:72,6,0	1/1:4,7:10:18.06:216,18,0	1/1:1,6:4:12.04:144,12,0	1/1:7,6:8:9.03:108,9,0	1/1:3,21:16:33.10:395,33,0	1/1:7,4:9:15:164,15,0	1/1:2,4:5:3.01:36,3,0	1/1:4,21:15:24.07:287,24,0	1/1:4,26:18:48.15:574,48,0	1/1:6,20:21:27.08:322,27,0	1/1:4,37:31:60.18:719,60,0	1/1:3,21:15:27.08:323,27,0	1/1:5,9:11:12.04:144,12,0	1/1:2,12:12:24.07:288,24,0	1/1:4,5:8:15.04:180,15,0	1/1:0,3:3:6.02:72,6,0	0/0:2,2:4:0.47:0,0,1	0/0:6,3:6:1.55:0,2,4	./.	1/1:4,9:10:12.04:144,12,0	./.	1/1:8,8:14:18.05:214,18,0	1/1:4,17:14:24.07:288,24,0	1/1:3,2:5:6.02:72,6,0
chr10	46239066	.	AG	A	5577.23	PASS	AB=0.614;AC=48;AF=0.857;AN=56;BaseQRankSum=1.492;DP=345;FS=13.869;HRun=4;HaplotypeScore=108.4830;InbreedingCoeff=0.2278;MQ=45.98;MQ0=9;MQRankSum=-1.284;QD=17.71;ReadPosRankSum=3.337;VQSLOD=3.6583;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:5,11:13:14.51:256,0,15	1/1:0,7:6:11.99:127,12,0	0/0:16,0:9:20.41:0,20,219	0/0:13,0:9:10.80:0,11,269	1/1:2,8:9:2.96:36,3,0	1/1:1,10:7:6.02:72,6,0	1/1:1,13:11:33.10:395,33,0	1/1:6,9:8:18.04:206,18,0	0/1:11,8:12:28.16:243,0,28	0/1:5,9:11:90.42:254,0,90	1/1:2,5:7:6.02:71,6,0	1/1:5,12:11:5.35:233,5,0	1/1:4,15:12:33.57:396,34,0	1/1:4,10:10:24.07:287,24,0	1/1:3,13:13:30.09:359,30,0	1/1:5,14:12:33.10:395,33,0	0/1:2,9:10:20.69:194,0,21	1/1:4,4:7:9.03:108,9,0	1/1:0,5:5:15.05:180,15,0	1/1:0,8:8:12.04:144,12,0	1/1:1,4:5:9.03:108,9,0	1/1:3,14:15:0.16:195,0,0	1/1:1,7:8:12.02:133,12,0	1/1:1,1:1:3.01:36,3,0	1/1:3,10:7:15.05:180,15,0	1/1:1,18:13:39.12:465,39,0	1/1:2,17:14:36.11:432,36,0	1/1:0,2:2:6.02:72,6,0
chr10	46239127	.	T	TA	1217.09	PASS	AB=0.909;AC=25;AF=0.463;AN=54;BaseQRankSum=8.422;DP=395;FS=16.849;HRun=0;HaplotypeScore=123.1141;InbreedingCoeff=0.7283;MQ=102.43;MQ0=1;MQRankSum=-7.748;QD=20.63;ReadPosRankSum=-0.636;VQSLOD=3.6391;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:30:61.01:0,61,683	1/1:0,2:2:6.02:94,6,0	0/0:37,0:36:99:0,102,1353	0/0:25,0:24:55.05:0,55,655	1/1:0,3:3:3.01:48,3,0	0/0:20,0:18:46.34:0,46,538	0/0:45,0:45:99:0,121,1417	1/1:0,2:1:3.01:48,3,0	0/1:18,2:20:44:44,0,442	1/1:0,1:1:3.01:48,3,0	1/1:0,1:1:3.01:47,3,0	0/0:22,1:20:9.82:0,10,581	0/0:23,0:22:59.54:0,60,659	1/1:0,3:3:9.03:142,9,0	1/1:0,3:3:9.03:142,9,0	1/1:0,5:4:12.04:189,12,0	1/1:0,10:10:21.07:326,21,0	1/1:0,4:4:9.03:142,9,0	0/0:11,0:11:33.10:0,33,400	0/0:17,0:17:45.08:0,45,518	0/0:24,0:24:57.17:0,57,698	0/0:28,0:27:78.03:0,78,862	0/0:18,0:18:47.96:0,48,521	0/0:9,0:9:19.82:0,20,216	1/1:0,1:1:3.01:47,3,0	1/1:0,4:2:6.02:94,6,0	0/0:25,0:23:59.85:0,60,722	./.
chr10	46239128	.	TAG	T	8255.06	PASS	AC=26;AF=0.565;AN=46;BaseQRankSum=0.395;DP=392;FS=3.149;HRun=0;HaplotypeScore=103.0551;InbreedingCoeff=0.6618;MQ=102.01;MQ0=1;MQRankSum=-8.993;QD=28.27;ReadPosRankSum=5.516;VQSLOD=5.9856;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,25:30:57.18:745,57,0	./.	0/0:37,0:36:78.26:0,78,1254	0/0:23,1:23:3.02:0,3,567	0/0:3,0:3:0:0,0,0	1/1:2,18:18:45.15:588,45,0	1/1:3,40:44:99:1455,111,0	./.	1/1:7,14:21:39.13:506,39,0	./.	./.	1/1:6,17:20:42.14:552,42,0	1/1:5,16:21:51.15:649,51,0	0/0:3,0:3:0:0,0,0	0/0:3,0:3:0:0,0,0	0/0:5,0:4:0:0,0,0	0/0:10,0:10:2.04:0,2,6	0/0:4,0:4:0:0,0,0	1/1:1,10:11:30.10:394,30,0	1/1:6,11:17:36.12:473,36,0	1/1:3,21:24:51.17:669,51,0	1/1:3,25:27:66.17:848,66,0	1/1:3,15:18:36.10:459,36,0	1/1:0,9:9:24.08:307,24,0	0/0:1,0:1:0:0,0,0	0/0:4,0:2:0:0,0,0	1/1:8,17:23:47.71:611,48,0	./.
chr10	46240042	.	TAAG	T	11866.15	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-7.101;DP=683;FS=0.625;HRun=0;HaplotypeScore=129.5944;InbreedingCoeff=1.0000;MQ=73.38;MQ0=0;MQRankSum=-3.976;QD=37.43;ReadPosRankSum=2.613;VQSLOD=5.8345;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,35:38:81.27:1340,81,0	0/0:15,0:15:42.14:0,42,952	0/0:19,0:19:51.18:0,51,1112	0/0:19,0:19:51.01:0,51,1062	0/0:34,0:34:99:0,102,2304	1/1:1,17:18:48.16:800,48,0	1/1:1,23:24:63.22:1049,63,0	0/0:27,0:27:78.26:0,78,1728	1/1:2,19:21:60.21:997,60,0	0/0:33,0:33:99:0,99,2179	0/0:26,0:26:69.24:0,69,1525	1/1:2,21:23:57.19:936,57,0	1/1:0,28:29:81.28:1335,81,0	0/0:17,0:17:51.18:0,51,1156	0/0:36,0:36:99:0,105,2360	0/0:31,1:32:43.33:0,43,1969	0/0:27,0:26:81.28:0,81,1835	0/0:21,0:21:60.21:0,60,1360	1/1:4,18:22:51.16:816,51,0	1/1:3,17:20:39.13:649,39,0	1/1:2,23:25:48.14:800,48,0	1/1:0,20:20:48.16:799,48,0	1/1:1,19:20:39.13:649,39,0	1/1:3,24:27:41.81:699,42,0	0/0:20,0:20:60.21:0,60,1355	0/0:21,0:21:60.21:0,60,1358	1/1:2,28:30:60.21:998,60,0	0/0:19,0:19:57.20:0,57,1292
chr10	46240386	.	T	TG	2703.78	PASS	AB=1.000;AC=25;AF=0.446;AN=56;BaseQRankSum=0.562;DP=418;FS=8.677;HRun=1;HaplotypeScore=108.7119;InbreedingCoeff=0.8777;MQ=66.61;MQ0=3;MQRankSum=-0.575;QD=13.19;ReadPosRankSum=3.527;VQSLOD=2.3273;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:6.72:0,7,55	1/1:7,0:7:11.90:97,12,0	0/0:14,0:9:18.03:0,18,191	0/0:15,0:11:26.89:0,27,220	1/1:22,0:22:26.86:241,27,0	0/0:12,0:12:23.62:0,24,153	0/0:13,0:13:28.66:0,29,202	0/1:28,0:28:7.96:8,0,235	0/0:11,0:11:20.83:0,21,159	1/1:16,0:17:38.76:377,39,0	1/1:24,3:27:47.38:446,47,0	0/0:10,0:12:31.54:0,32,225	0/0:8,0:8:23.90:0,24,201	1/1:11,0:11:5.93:45,6,0	1/1:18,1:16:38.76:337,39,0	1/1:14,0:13:26.89:265,27,0	1/1:12,0:12:29.95:295,30,0	1/1:15,1:16:8.03:211,8,0	0/0:23,0:22:46.28:0,46,416	0/0:21,0:21:48.11:0,48,401	0/0:18,0:18:29.60:0,30,216	0/0:9,0:9:20.26:0,20,126	0/0:20,0:20:40.90:0,41,268	0/0:9,0:9:7.86:0,8,94	1/1:12,0:11:20.30:173,20,0	1/1:13,0:13:29.80:287,30,0	0/0:17,0:17:17.35:0,17,246	1/1:6,1:7:14.83:142,15,0
chr10	46240387	.	G	GGT	4564.11	PASS	AB=0.930;AC=27;AF=0.482;AN=56;BaseQRankSum=0.896;DP=461;FS=10.052;HRun=0;HaplotypeScore=133.0278;InbreedingCoeff=0.6809;MQ=63.91;MQ0=3;MQRankSum=-1.871;QD=16.48;ReadPosRankSum=0.474;VQSLOD=4.5899;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:1.37:0,1,28	1/1:1,6:9:12.04:202,12,0	0/0:15,0:8:21.01:0,21,229	0/0:15,0:11:26.86:0,27,222	1/1:5,19:26:26.94:386,27,0	0/0:11,0:11:19.29:0,19,125	0/0:13,0:13:4.79:0,5,168	0/1:25,0:34:39.84:40,0,307	0/0:11,0:11:14.29:0,14,82	1/1:22,0:22:47.99:506,48,0	1/1:9,19:33:53.95:702,54,0	0/0:12,0:12:3.32:0,3,127	0/0:8,0:8:22.72:0,23,172	1/1:2,12:15:6.02:103,6,0	1/1:17,3:17:37.85:460,38,0	1/1:15,1:16:30.47:370,30,0	1/1:13,1:14:29.93:365,30,0	1/1:18,0:19:34.32:362,34,0	0/0:21,0:21:53.69:0,54,448	0/0:21,0:21:48.33:0,48,413	0/0:19,0:19:19.48:0,19,199	0/1:9,0:9:7.77:8,0,49	0/1:20,0:20:40.81:41,0,149	0/0:8,0:9:4.37:0,4,58	1/1:13,2:14:32.94:354,33,0	1/1:14,1:16:38.85:434,39,0	0/0:16,0:17:29.24:0,29,257	1/1:6,1:7:18.02:233,18,0
chr10	46240400	.	TTTG	T	1232.67	PASS	AB=0.983;AC=26;AF=0.464;AN=56;BaseQRankSum=4.222;DP=474;FS=10.479;HRun=0;HaplotypeScore=153.4561;InbreedingCoeff=0.0107;MQ=47.35;MQ0=7;MQRankSum=-5.297;QD=3.93;ReadPosRankSum=-1.090;VQSLOD=2.0970;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:15:11.06:98,11,0	0/0:12,0:12:22.97:0,23,197	0/1:14,0:5:13.35:13,0,84	0/1:8,1:4:27.42:27,0,45	0/1:23,0:23:5.20:5,0,296	0/1:16,0:15:13.50:102,0,14	0/1:18,0:18:9.51:87,0,10	0/0:34,0:34:10.91:0,11,1266	1/1:14,0:14:6.19:50,6,0	0/0:19,0:19:8.44:0,8,333	0/0:32,0:32:25.72:0,26,666	0/1:12,0:12:15.60:72,0,16	0/1:10,0:10:49.15:49,0,49	0/0:15,0:15:1.15:0,1,126	0/0:19,0:16:4.72:0,5,230	0/0:17,0:15:3.42:0,3,386	0/0:12,0:12:15.44:0,15,315	0/1:18,0:18:45.80:46,0,289	0/1:25,0:23:0.03:225,0,0	1/1:14,7:21:12.41:158,12,0	0/1:17,0:17:19.21:55,0,19	1/1:15,0:15:10.83:93,11,0	1/1:16,0:18:17.69:127,18,0	1/1:9,0:9:8.55:52,9,0	0/1:17,0:16:6.18:6,0,332	0/1:15,0:15:9.48:9,0,382	0/1:15,3:18:5.14:125,0,5	0/1:9,0:9:0.54:1,0,224
chr10	46240401	.	TTG	T	1677.95	PASS	AB=0.990;AC=30;AF=0.536;AN=56;BaseQRankSum=3.670;DP=469;FS=12.252;HRun=0;HaplotypeScore=143.9916;InbreedingCoeff=-0.1195;MQ=47.21;MQ0=7;MQRankSum=-4.905;QD=4.57;ReadPosRankSum=-0.686;VQSLOD=2.4541;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:14,1:14:16.24:103,16,0	0/0:12,0:12:17.84:0,18,158	0/0:14,0:5:6.92:0,7,98	0/0:10,0:5:6.87:0,7,67	0/1:23,0:23:64.81:65,0,226	0/1:16,0:15:7.46:120,0,7	1/1:18,0:18:3.99:90,4,0	0/0:34,0:34:18.33:0,18,1156	1/1:14,0:14:8.62:105,9,0	0/1:20,0:20:2.25:2,0,260	0/0:32,0:32:20.09:0,20,465	0/1:12,0:12:10.65:121,0,11	0/1:10,0:10:20.92:81,0,21	0/1:16,0:16:19.85:20,0,111	0/1:19,0:16:54.63:55,0,130	0/1:17,0:15:14.73:15,0,300	0/1:12,0:12:17.39:17,0,212	0/1:18,0:18:87.19:87,0,244	0/1:22,3:23:7.26:156,0,7	1/1:17,2:19:13.18:135,13,0	0/1:16,0:16:19.23:44,0,19	1/1:13,0:13:16.90:143,17,0	1/1:16,0:16:26.40:196,26,0	1/1:9,0:9:13.07:67,13,0	0/1:17,0:16:13.18:13,0,269	0/1:15,0:15:54:54,0,293	0/1:17,1:18:0.75:133,0,1	0/1:9,0:9:25.56:26,0,180
chr10	46240407	.	GTTTTGGTT	G	4020.96	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=1.684;DP=454;FS=15.766;HRun=0;HaplotypeScore=182.2110;InbreedingCoeff=0.9674;MQ=46.41;MQ0=7;MQRankSum=-5.590;QD=20.94;ReadPosRankSum=-5.762;VQSLOD=0.3589;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:11,2:12:27.27:307,27,0	0/0:12,0:12:20.96:0,21,400	0/0:15,0:5:11.97:0,12,179	0/0:10,0:5:12.04:0,12,311	0/0:22,0:22:28.75:0,29,910	1/1:15,0:14:18.02:217,18,0	1/1:19,0:19:18.38:162,18,0	0/0:39,0:39:66.58:0,67,1477	1/1:12,0:12:29.23:270,29,0	0/0:18,0:18:47.84:0,48,916	0/0:29,0:29:63.86:0,64,1569	1/1:10,2:12:21.03:288,21,0	1/1:10,1:12:24.38:272,24,0	0/0:13,0:13:12.89:0,13,329	0/0:20,0:17:35.88:0,36,633	0/0:18,0:16:45.10:0,45,921	0/0:13,0:13:23.92:0,24,529	0/0:18,0:18:19.08:0,19,624	1/1:24,0:22:26.93:561,27,0	1/1:14,0:14:38.49:672,38,0	1/1:15,0:15:11.13:114,11,0	1/1:16,1:17:33.90:382,34,0	1/1:13,1:14:21.55:276,22,0	1/1:8,0:8:8.98:84,9,0	0/0:13,0:12:21.83:0,22,687	0/0:14,0:14:28.07:0,28,792	1/1:17,0:17:21.54:416,22,0	0/0:8,0:8:21.01:0,21,466
chr10	46240412	.	GGTTTTTTT	G	3090.98	PASS	AB=0.967;AC=23;AF=0.411;AN=56;BaseQRankSum=4.274;DP=427;FS=8.562;HRun=0;HaplotypeScore=173.0255;InbreedingCoeff=0.6301;MQ=51.43;MQ0=6;MQRankSum=-5.377;QD=18.40;ReadPosRankSum=-1.310;VQSLOD=1.9161;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:12:6.29:116,6,0	0/0:11,0:11:21.03:0,21,497	0/0:17,0:7:17.17:0,17,226	0/0:11,0:7:15.05:0,15,403	0/0:23,0:24:37.93:0,38,1243	1/1:12,0:11:16.32:99,16,0	1/1:16,0:16:8.81:45,9,0	0/0:32,0:36:60.19:0,60,1838	0/1:13,0:13:21.24:46,0,21	0/0:18,0:18:52.06:0,52,1238	0/0:24,0:26:64.77:0,65,1810	1/1:12,0:12:18.28:143,18,0	0/1:8,0:9:8.26:93,0,8	0/0:12,0:12:1.14:0,1,426	0/0:16,0:15:39.13:0,39,876	0/0:16,0:15:45.15:0,45,1111	0/0:16,0:17:23.14:0,23,764	0/0:18,0:18:0.86:0,1,806	1/1:3,18:19:54.12:948,54,0	1/1:1,12:13:36.04:819,36,0	1/1:1,0:9:11.96:176,12,0	0/1:18,0:18:51.58:128,0,52	1/1:5,0:12:0.83:123,1,0	1/1:6,0:6:3.17:21,3,0	0/0:12,0:12:33.07:0,33,792	0/0:13,0:15:41.72:0,42,985	1/1:0,14:14:21.07:532,21,0	0/0:6,0:7:21.07:0,21,550
chr10	46240415	.	T	TG	1085.70	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=3.272;DP=439;FS=24.068;HRun=0;HaplotypeScore=135.5985;InbreedingCoeff=0.8099;MQ=51.22;MQ0=6;MQRankSum=-3.716;QD=7.39;ReadPosRankSum=1.540;VQSLOD=1.9910;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:13:9.67:166,10,0	0/0:11,0:11:16.53:0,17,188	0/0:17,0:7:5.98:0,6,104	0/0:11,0:7:12.46:0,12,129	0/0:24,0:24:49.86:0,50,496	0/0:11,0:10:10.71:0,11,63	0/0:17,0:17:11.35:0,11,76	0/0:36,0:36:99:0,101,863	1/1:15,0:15:22.66:211,23,0	0/0:18,0:18:53.82:0,54,532	0/0:26,0:26:53.07:0,53,605	1/1:8,6:14:6.45:72,6,0	1/1:9,0:9:17.56:119,18,0	0/0:13,0:13:17.95:0,18,175	0/0:19,0:16:23.46:0,23,219	0/0:17,0:16:47.30:0,47,442	0/0:16,0:16:34.77:0,35,298	0/0:19,0:19:34.53:0,35,290	1/1:21,0:19:27.79:186,28,0	1/1:13,0:13:9.51:83,10,0	1/1:9,0:9:8.12:50,8,0	1/1:18,0:18:22.23:273,22,0	0/1:13,0:13:23.32:39,0,23	1/1:7,0:7:7.23:37,7,0	0/0:14,0:13:35.40:0,35,322	0/0:15,0:15:27.44:0,27,319	1/1:14,0:14:3.63:54,4,0	0/0:8,0:8:17.03:0,17,185
chr10	46240646	.	TCACACACACACACA	T	10599.10	PASS	AB=0.750;AC=35;AF=0.648;AN=54;BaseQRankSum=8.710;DP=624;FS=17.871;HRun=0;HaplotypeScore=232.7210;InbreedingCoeff=0.8044;MQ=72.35;MQ0=12;MQRankSum=-7.191;QD=28.88;ReadPosRankSum=3.858;VQSLOD=2.3619;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:34:10.75:139,11,0	1/1:3,0:8:9.03:279,9,0	0/0:37,0:18:3.01:0,3,54	0/0:58,0:38:14.41:0,14,235	1/1:7,17:23:24.06:724,24,0	0/0:9,0:16:9.03:0,9,387	0/0:19,0:28:17.82:0,18,568	0/0:26,0:26:14.52:0,15,199	1/1:9,0:18:15.02:401,15,0	1/1:12,12:25:36.07:966,36,0	./.	1/1:11,0:21:9.03:286,9,0	1/1:6,0:15:14.94:407,15,0	1/1:7,18:24:27.09:975,27,0	1/1:7,0:30:48.14:1476,48,0	1/1:7,9:16:24.08:832,24,0	1/1:12,12:24:18.06:653,18,0	1/1:10,7:17:12.04:386,12,0	0/0:19,0:19:24.03:0,24,749	0/0:12,0:17:33.10:0,33,1661	0/0:25,0:25:36.10:0,36,1728	0/1:12,0:18:55.36:186,0,55	1/1:9,0:23:15.02:387,15,0	1/1:12,0:22:3.01:98,3,0	1/1:4,15:19:30.10:1045,30,0	1/1:8,10:19:30.10:908,30,0	0/0:13,0:17:26.85:0,27,1526	1/1:3,3:7:10.52:450,11,0
chr10	46241811	.	T	TG	14424.66	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=21.506;DP=782;FS=1.178;HRun=2;HaplotypeScore=117.8069;InbreedingCoeff=0.9999;MQ=82.49;MQ0=0;MQRankSum=-2.840;QD=36.15;ReadPosRankSum=4.679;VQSLOD=4.4960;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,47:51:99:1770,123,0	0/0:11,0:11:33.10:0,33,409	0/0:32,0:32:87.13:0,87,1067	0/0:31,0:31:84.24:0,84,1008	0/0:21,0:21:63.19:0,63,768	1/1:1,25:26:72.23:1037,72,0	1/1:2,27:29:72.24:1037,72,0	0/0:38,0:38:99:0,99,1195	1/1:1,39:40:99:1468,102,0	0/0:33,0:33:93.28:0,93,1143	0/0:17,0:17:48.15:0,48,595	1/1:0,28:28:84.28:1209,84,0	1/1:0,26:26:63.20:907,63,0	0/0:34,0:34:99:0,102,1235	0/0:28,0:28:81.24:0,81,991	0/0:35,0:35:99:0,99,1227	0/0:28,0:28:84.18:0,84,995	0/0:14,0:14:42.13:0,42,520	1/1:4,26:30:81.26:1138,81,0	1/1:3,24:27:81.27:1157,81,0	1/1:0,27:27:66.15:925,66,0	1/1:0,24:24:57.19:814,57,0	1/1:2,16:18:42.14:589,42,0	1/1:3,31:34:78.26:1123,78,0	0/0:22,0:22:60.19:0,60,743	0/0:28,0:28:81.23:0,81,967	1/1:0,39:39:87.29:1251,87,0	0/0:11,0:11:33.10:0,33,409
chr10	46242740	.	A	AGTCTT	29676.69	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-0.877;DP=624;FS=3.597;HRun=0;HaplotypeScore=256.0768;InbreedingCoeff=0.9974;MQ=87.49;MQ0=0;MQRankSum=-17.099;QD=76.88;ReadPosRankSum=0.042;VQSLOD=4.8647;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:63.17:0,63,1275	1/1:4,12:17:45.14:1305,45,0	0/0:30,0:30:81.20:0,81,1552	0/0:31,0:31:75.26:0,75,1560	1/1:2,15:13:36.07:1010,36,0	1/1:8,21:29:81.28:2517,81,0	1/1:9,10:19:57.14:1545,57,0	1/1:17,0:32:42.42:1963,42,0	0/0:33,0:33:99:0,99,2186	1/1:6,13:17:39.13:1233,39,0	1/1:3,10:11:24.08:714,24,0	0/0:18,0:18:54.19:0,54,1185	0/0:33,0:33:99:0,99,2147	1/1:5,26:31:87.30:2748,87,0	1/1:7,25:32:93.32:2918,93,0	1/1:8,15:23:66.19:1985,66,0	1/1:3,5:8:24.08:744,24,0	1/1:3,5:8:18.06:571,18,0	1/1:5,11:16:48.16:1505,48,0	1/1:4,15:18:51.17:1583,51,0	1/1:4,15:19:42.14:1286,42,0	0/0:15,0:15:42.14:0,42,936	0/0:23,0:22:60.18:0,60,1254	0/0:31,0:31:87.19:0,87,1863	1/1:5,15:18:48.14:1343,48,0	1/1:5,19:23:66.18:2046,66,0	1/1:6,19:24:72.23:2168,72,0	1/1:4,11:9:21.04:494,21,0
chr10	46242771	.	A	AC	17324.77	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=9.374;DP=607;FS=16.307;HRun=1;HaplotypeScore=220.6306;InbreedingCoeff=0.9893;MQ=88.42;MQ0=0;MQRankSum=-11.363;QD=31.61;ReadPosRankSum=5.969;VQSLOD=1.6761;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,24:25:30.03:422,30,0	1/1:0,15:15:42.10:594,42,0	0/0:27,0:27:66.79:0,67,794	0/0:32,0:32:80.85:0,81,1014	1/1:1,22:19:35.87:507,36,0	1/1:4,25:29:63.13:889,63,0	1/1:2,15:17:45.15:661,45,0	1/1:4,18:22:57.12:796,57,0	1/1:6,24:30:72.24:1075,72,0	1/1:3,27:28:60.12:835,60,0	1/1:4,15:18:26.98:373,27,0	1/1:4,16:20:48.16:711,48,0	1/1:5,28:32:84.24:1221,84,0	1/1:0,24:24:72.20:1049,72,0	1/1:2,26:28:75.21:1093,75,0	1/1:1,16:17:48.12:690,48,0	1/1:0,14:14:33.04:466,33,0	1/1:2,6:8:18.06:263,18,0	1/1:4,14:18:45.08:624,45,0	1/1:3,14:17:36.04:510,36,0	1/1:3,15:18:36.12:537,36,0	1/1:1,16:17:33.58:493,34,0	1/1:2,21:22:42.10:603,42,0	1/1:2,26:28:72.21:1054,72,0	1/1:1,15:14:18.06:268,18,0	1/1:11,8:18:33.09:454,33,0	1/1:1,21:22:54.18:805,54,0	1/1:1,15:12:24.03:333,24,0
chr10	46243073	.	T	TAA	8611.83	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=5.394;DP=535;FS=31.811;HRun=10;HaplotypeScore=96.6655;InbreedingCoeff=0.9711;MQ=54.68;MQ0=0;MQRankSum=2.523;QD=30.32;ReadPosRankSum=-0.310;VQSLOD=3.0638;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,99,993	1/1:1,7:8:21.03:288,21,0	0/0:10,0:7:15.03:0,15,152	0/0:3,0:1:3.01:0,3,31	1/1:2,20:24:60.05:837,60,0	0/0:24,0:24:66.12:0,66,670	0/0:11,0:11:27.05:0,27,275	1/1:15,1:33:66.05:630,66,0	0/0:19,0:19:39.07:0,39,395	1/1:5,14:20:42.11:598,42,0	1/1:3,13:17:36.04:487,36,0	0/0:16,0:16:42.09:0,42,427	0/0:20,0:20:22.03:0,22,367	1/1:3,16:19:30.06:422,30,0	1/1:3,22:27:66.59:935,67,0	1/1:2,17:18:39.13:581,39,0	1/1:4,26:30:72.24:1072,72,0	1/1:3,18:22:48.63:711,49,0	0/0:22,0:21:45.02:0,45,445	0/0:18,0:18:45.06:0,45,458	0/0:12,0:12:36.04:0,36,356	0/0:10,0:10:17.96:0,18,183	0/0:16,0:16:30.02:0,30,305	0/0:12,0:12:24.04:0,24,244	1/1:3,13:17:35.56:476,36,0	1/1:5,25:31:71.69:1012,72,0	0/0:17,0:17:50.83:0,51,500	1/1:2,12:17:43.61:562,44,0
chr10	46243496	.	GGTCATCCT	G	2149.23	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.159;DP=636;FS=9.375;HRun=0;HaplotypeScore=177.7141;InbreedingCoeff=0.9548;MQ=61.08;MQ0=1;MQRankSum=-6.563;QD=67.16;ReadPosRankSum=-2.848;VQSLOD=2.6137;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,126,5306	0/0:4,0:4:12.02:0,12,431	0/0:21,0:16:42.14:0,42,1504	0/0:16,0:12:32.88:0,33,908	0/0:27,0:27:81.28:0,81,3658	0/0:23,0:23:69.24:0,69,3016	0/0:20,0:20:57.18:0,57,2349	1/1:5,27:32:81.25:2244,81,0	0/0:21,0:21:63.22:0,63,2854	0/0:27,0:27:78.26:0,78,3353	0/0:27,0:27:81.28:0,81,3506	0/0:19,0:19:54.19:0,54,2366	0/0:25,0:25:72.23:0,72,3147	0/0:23,0:23:69.24:0,69,3092	0/0:30,0:30:90.31:0,90,3882	0/0:24,0:24:72.25:0,72,3182	0/0:29,0:29:81.26:0,81,3479	0/0:14,0:14:39.10:0,39,1648	0/0:27,0:27:75.26:0,75,3384	0/0:19,0:19:57.20:0,57,2527	0/0:35,0:35:99:0,102,4261	0/0:11,0:11:33.11:0,33,1495	0/0:12,0:12:35.79:0,36,1505	0/0:26,0:25:75.24:0,75,3142	0/0:12,0:12:36.11:0,36,1493	0/0:28,0:27:81.28:0,81,3649	0/0:36,0:36:99:0,108,4645	0/0:5,0:5:15.05:0,15,680
chr10	46243861	.	T	TTAATAATAATAA	3181.29	PASS	AB=1.000;AC=27;AF=0.614;AN=44;BaseQRankSum=-1.122;DP=172;FS=0.000;HRun=0;HaplotypeScore=60.6239;InbreedingCoeff=0.5696;MQ=63.04;MQ0=0;MQRankSum=-3.972;QD=25.86;ReadPosRankSum=-0.778;VQSLOD=1.9663;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:15.05:0,15,469	./.	./.	0/1:3,0:1:0:0,0,0	1/1:9,0:9:3.01:138,3,0	0/0:2,0:7:9.03:0,9,195	0/0:1,0:2:3.01:0,3,84	1/1:20,0:20:15.03:243,15,0	0/0:6,0:6:9.02:0,9,233	1/1:2,0:3:3.01:97,3,0	1/1:4,0:6:3.01:96,3,0	0/0:2,0:3:6.02:0,6,135	0/0:3,0:3:3.01:0,3,103	1/1:4,2:6:9.03:522,9,0	0/0:3,0:5:3.01:0,3,84	./.	1/1:22,0:22:15.05:480,15,0	1/1:9,1:10:12.04:543,12,0	1/1:10,0:10:3.48:57,3,0	1/1:4,0:5:3.01:36,3,0	./.	./.	./.	0/0:2,0:2:6.02:0,6,206	1/1:5,0:7:3.01:96,3,0	1/1:4,1:7:12.04:409,12,0	1/1:5,0:5:6.02:87,6,0	1/1:5,3:10:9.03:524,9,0
chr10	46245284	.	TGGG	T	7548.68	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=8.412;DP=684;FS=16.410;HRun=4;HaplotypeScore=137.5119;InbreedingCoeff=0.9985;MQ=80.52;MQ0=0;MQRankSum=-4.154;QD=42.17;ReadPosRankSum=4.798;VQSLOD=3.2043;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,34:37:90.29:1550,90,0	0/0:10,0:10:30.10:0,30,689	0/0:26,0:26:75.23:0,75,1634	0/0:25,0:25:55.99:0,56,1326	0/0:23,0:23:60.20:0,60,1335	0/0:17,0:17:48.62:0,49,674	0/0:27,0:27:75.16:0,75,1025	0/0:25,0:25:75.25:0,75,1710	1/1:1,31:32:81.28:1428,81,0	0/0:25,0:25:75.24:0,75,1626	0/0:11,0:11:30.10:0,30,688	1/1:2,25:27:69.24:1216,69,0	1/1:2,21:23:66.23:1158,66,0	0/0:34,0:34:96.33:0,96,2252	0/0:25,0:25:72.23:0,72,1614	0/0:42,0:42:99:0,114,2602	0/0:36,0:36:99:0,105,2435	0/0:15,0:15:45.15:0,45,1038	0/0:22,0:22:66.23:0,66,1524	0/0:8,0:8:24.08:0,24,567	0/0:58,0:58:99:0,163,3584	1/1:1,13:14:39.13:685,39,0	1/1:2,13:15:27.09:473,27,0	1/1:5,26:31:60.44:1037,60,0	0/0:13,0:13:36.12:0,36,850	0/0:28,0:28:84.29:0,84,1986	0/0:28,0:28:84.29:0,84,1944	0/0:7,0:7:21.07:0,21,465
chr10	46245350	.	AG	A	18095.30	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=6.508;DP=671;FS=17.004;HRun=4;HaplotypeScore=103.2524;InbreedingCoeff=0.9926;MQ=81.00;MQ0=0;MQRankSum=-8.849;QD=30.67;ReadPosRankSum=7.189;VQSLOD=2.9274;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,36:38:99:1248,107,0	1/1:1,9:10:21.02:236,21,0	0/0:28,0:27:78.15:0,78,983	0/0:22,0:22:57.17:0,57,752	1/1:2,12:14:33.07:377,33,0	1/1:8,9:17:36.10:421,36,0	1/1:0,21:21:57.17:682,57,0	0/0:31,0:31:81.23:0,81,1080	1/1:2,23:25:69.17:808,69,0	1/1:2,24:26:72.21:849,72,0	1/1:2,10:12:30.09:358,30,0	1/1:4,35:39:99:1171,99,0	1/1:4,17:21:51.11:587,51,0	1/1:3,29:31:81.25:963,81,0	1/1:0,23:23:66.20:790,66,0	1/1:2,31:33:84.26:1007,84,0	1/1:3,34:37:93.28:1115,93,0	1/1:0,17:17:51.16:611,51,0	1/1:0,22:22:66.17:757,66,0	1/1:1,18:19:54.12:631,54,0	1/1:1,43:44:99:1329,111,0	1/1:1,15:16:45.14:539,45,0	1/1:3,20:23:51.15:602,51,0	1/1:1,30:31:65.88:791,66,0	1/1:0,16:16:42.13:504,42,0	1/1:4,19:23:63.10:723,63,0	1/1:0,26:26:69.21:817,69,0	1/1:0,5:5:15.05:179,15,0
chr10	46245354	.	GA	G	5465.68	PASS	AB=0.962;AC=43;AF=0.768;AN=56;BaseQRankSum=12.050;DP=674;FS=17.560;HRun=4;HaplotypeScore=143.8928;InbreedingCoeff=0.2942;MQ=79.46;MQ0=0;MQRankSum=-6.221;QD=9.19;ReadPosRankSum=12.234;VQSLOD=-0.3781;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:39,0:39:51.34:375,51,0	0/1:10,0:10:23.97:34,0,24	0/0:31,0:30:80.42:0,80,991	0/0:19,0:19:54.08:0,54,676	0/1:14,2:16:33.20:105,0,33	1/1:10,4:14:32.48:208,32,0	1/1:21,0:21:49.86:242,50,0	0/0:29,0:29:81.22:0,81,1030	1/1:23,1:24:46.71:323,47,0	0/1:26,1:27:19.20:157,0,19	0/1:11,1:12:13.02:97,0,13	1/1:38,1:39:12.52:321,13,0	1/1:19,0:19:39.40:183,39,0	1/1:31,1:31:28.29:326,28,0	1/1:23,0:23:58.02:281,58,0	1/1:33,0:33:25.21:269,25,0	1/1:35,0:35:61.08:344,61,0	1/1:17,0:17:45.40:203,45,0	0/1:26,0:26:42.90:187,0,43	0/1:22,1:23:44:118,0,44	1/1:44,0:44:59.73:451,60,0	1/1:16,0:16:38.22:160,38,0	1/1:20,1:21:43.18:182,43,0	0/1:33,0:33:14.34:206,0,14	1/1:17,0:17:11.39:98,11,0	1/1:21,2:23:27.09:241,27,0	1/1:26,0:26:47.26:297,47,0	1/1:5,0:5:13.30:60,13,0
chr10	46245549	.	GTTGT	G	4900.10	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=8.974;DP=522;FS=0.871;HRun=0;HaplotypeScore=120.3534;InbreedingCoeff=0.9190;MQ=56.81;MQ0=4;MQRankSum=-9.355;QD=32.45;ReadPosRankSum=0.601;VQSLOD=4.7807;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:16,7:24:56.04:817,56,0	0/0:11,0:11:33.11:0,33,618	0/0:32,0:22:58.49:0,58,944	0/0:22,0:12:29.85:0,30,587	0/0:21,0:21:63.08:0,63,1238	1/1:2,15:17:23.78:614,24,0	1/1:3,15:18:31.66:552,32,0	0/0:30,0:30:84.21:0,84,1076	1/1:4,10:14:39.11:667,39,0	0/0:25,0:25:71.26:0,71,1443	0/0:12,0:12:33.08:0,33,611	1/1:4,7:11:27.09:486,27,0	1/1:8,5:13:32.52:457,33,0	0/0:15,0:14:33.09:0,33,723	0/0:11,0:11:27.09:0,27,574	0/0:11,0:11:33.08:0,33,636	0/0:22,0:22:66.14:0,66,1342	0/0:23,0:23:69.18:0,69,1623	0/0:18,0:18:54.12:0,54,662	0/0:27,0:27:75.16:0,75,931	0/0:16,0:16:33.06:0,33,434	1/1:9,10:19:48.03:654,48,0	1/1:3,8:11:26.95:455,27,0	1/1:1,17:18:11.51:187,12,0	0/0:26,0:26:69.16:0,69,1321	0/0:30,0:30:81.22:0,81,1532	0/0:18,0:18:44.98:0,45,513	0/1:6,0:6:11.37:11,0,206
chr10	46245551	.	TG	T	2018.95	PASS	AB=0.974;AC=22;AF=0.393;AN=56;BaseQRankSum=12.660;DP=534;FS=13.162;HRun=1;HaplotypeScore=110.5595;InbreedingCoeff=0.6721;MQ=55.82;MQ0=9;MQRankSum=-7.563;QD=8.70;ReadPosRankSum=1.835;VQSLOD=-0.0034;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:23:54.39:398,54,0	0/0:11,0:11:26.82:0,27,304	0/1:34,2:22:11.29:11,0,461	0/0:26,1:12:18.06:0,18,291	0/0:23,0:23:50.25:0,50,636	1/1:17,0:17:34.71:231,35,0	1/1:16,0:16:29.78:191,30,0	0/0:28,0:28:39.87:0,40,378	1/1:15,0:15:38.68:280,39,0	0/0:27,0:27:70.35:0,70,807	0/0:13,0:13:30.46:0,30,327	1/1:10,0:10:26.67:188,27,0	1/1:13,0:13:23.38:234,23,0	0/0:15,0:14:36.05:0,36,416	0/0:12,0:12:16.21:0,16,298	0/0:12,0:12:25.58:0,26,330	0/0:22,0:22:65.98:0,66,732	0/0:24,0:23:69.14:0,69,838	0/1:17,1:18:25.46:25,0,112	0/0:27,1:27:8.60:0,9,257	0/1:16,0:16:15.24:15,0,24	1/1:19,0:19:47.72:370,48,0	1/1:13,0:13:26.11:184,26,0	1/1:18,0:18:11.47:78,11,0	0/0:26,0:26:64.46:0,64,731	0/0:29,0:29:81.17:0,81,937	0/1:18,0:18:23.05:23,0,33	0/0:5,0:5:4.44:0,4,108
chr10	46245552	.	GT	G	1744.06	PASS	AB=0.944;AC=30;AF=0.536;AN=56;BaseQRankSum=8.210;DP=551;FS=9.373;HRun=11;HaplotypeScore=112.3030;InbreedingCoeff=0.6718;MQ=56.25;MQ0=12;MQRankSum=-1.863;QD=5.43;ReadPosRankSum=2.133;VQSLOD=1.3146;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:23:6.91:78,7,0	0/1:8,2:11:19.39:19,0,201	0/1:38,0:22:6.31:6,0,286	0/0:28,0:13:16.04:0,16,158	0/0:23,1:25:32.90:0,33,459	1/1:17,0:17:16.77:69,17,0	1/1:16,0:16:0.01:38,0,0	1/1:13,15:28:39.40:341,39,0	1/1:16,0:16:23.46:73,23,0	0/0:28,0:27:51.55:0,52,526	0/0:14,0:14:18.45:0,18,177	1/1:11,0:11:16.45:47,16,0	0/1:13,0:13:8.13:17,0,8	0/0:15,0:14:32.74:0,33,323	0/0:12,0:12:24.47:0,24,237	0/1:12,1:13:0.59:1,0,192	0/0:22,0:22:51.56:0,52,529	0/0:24,0:23:60.15:0,60,638	1/1:7,10:17:38.68:307,39,0	1/1:12,17:28:16.35:294,16,0	1/1:2,14:17:28.90:227,29,0	1/1:20,0:19:17.57:55,18,0	1/1:13,0:13:20.06:75,20,0	1/1:20,0:20:4.38:17,4,0	0/0:26,1:28:29.67:0,30,463	0/0:28,0:28:57.04:0,57,552	1/1:3,14:18:38.84:285,39,0	0/0:5,0:5:3.02:0,3,87
chr10	46245568	.	CTGTGTGTG	C	2359.02	PASS	AB=0.775;AC=22;AF=0.407;AN=54;BaseQRankSum=0.675;DP=551;FS=4.462;HRun=0;HaplotypeScore=158.8723;InbreedingCoeff=0.6219;MQ=49.27;MQ0=34;MQRankSum=-3.733;QD=12.04;ReadPosRankSum=2.566;VQSLOD=2.6828;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:32:15.05:0,15,456	1/1:5,0:9:12.04:216,12,0	./.	0/0:32,0:11:3.01:0,3,37	1/1:12,10:22:18.06:393,18,0	0/0:23,0:22:15.88:0,16,351	0/0:20,0:19:5.89:0,6,86	0/0:23,0:23:18:0,18,236	0/0:14,0:14:2.92:0,3,17	1/1:13,6:18:20.93:412,21,0	1/1:7,4:11:11.84:181,12,0	0/0:17,0:16:12.04:0,12,383	0/0:12,0:10:9.02:0,9,175	0/1:10,0:17:29.56:30,0,59	1/1:9,0:13:6.02:100,6,0	0/1:10,2:11:68.48:68,0,93	1/1:17,6:22:3.01:68,3,0	1/1:22,0:21:3.69:79,4,0	0/0:17,0:17:9.03:0,9,229	0/0:24,0:23:24.08:0,24,621	0/0:16,0:16:12.04:0,12,404	0/0:17,0:16:6.02:0,6,166	0/0:22,0:21:18.06:0,18,524	0/0:24,0:24:9.97:0,10,233	1/1:13,7:22:26.98:532,27,0	1/1:15,1:16:17.97:394,18,0	0/0:18,0:17:15.05:0,15,421	1/1:4,1:5:3.01:75,3,0
chr10	46246169	.	C	CATATAT	122.06	PASS	AB=0.900;AC=10;AF=0.217;AN=46;BaseQRankSum=0.777;DP=189;FS=6.725;HRun=0;HaplotypeScore=78.3519;InbreedingCoeff=0.3530;MQ=48.39;MQ0=1;MQRankSum=-1.529;QD=3.49;ReadPosRankSum=-0.417;VQSLOD=0.9318;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:5,6:15:0.82:0,1,1	./.	0/0:2,0:1:3.01:0,3,39	0/0:3,0:3:7.58:0,8,106	0/0:6,0:6:2.98:0,3,24	./.	0/0:5,3:8:0.69:0,1,9	0/1:11,0:11:3.73:4,0,210	./.	0/0:16,0:15:16.59:0,17,398	1/1:7,0:7:2.88:15,3,0	./.	./.	0/0:7,0:7:2.01:0,2,47	0/0:8,0:8:2.30:0,2,64	0/1:3,1:4:0:0,0,0	0/0:7,0:6:8.89:0,9,70	0/0:3,0:3:8.76:0,9,80	0/0:12,0:12:23.76:0,24,392	0/0:9,0:9:5.67:0,6,87	0/0:6,0:6:2.85:0,3,63	1/1:4,0:4:3:25,3,0	1/1:3,1:4:6.02:147,6,0	1/1:5,0:5:3.01:43,3,0	0/0:6,0:6:9.02:0,9,145	0/0:4,0:4:9.03:0,9,157	0/0:12,0:12:8.91:0,9,76	0/0:1,0:1:3.01:0,3,36
chr10	46246312	.	GT	G	3053.24	PASS	AB=0.933;AC=19;AF=0.339;AN=56;BaseQRankSum=14.359;DP=485;FS=3.675;HRun=3;HaplotypeScore=74.4557;InbreedingCoeff=0.9202;MQ=75.91;MQ0=0;MQRankSum=0.987;QD=17.86;ReadPosRankSum=2.903;VQSLOD=3.5507;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:27:62.77:487,63,0	0/0:4,0:4:9.01:0,9,109	0/0:20,0:19:32.19:0,32,328	0/1:13,1:13:6.74:7,0,180	0/0:23,0:23:67.02:0,67,872	1/1:3,14:17:32.44:422,32,0	1/1:3,23:26:46.27:685,46,0	0/0:26,0:25:66.08:0,66,831	1/1:14,0:14:32.87:254,33,0	0/0:18,0:18:51.10:0,51,646	0/0:15,0:15:45.12:0,45,594	1/1:11,0:11:26.87:207,27,0	1/1:16,0:16:41.84:327,42,0	0/0:14,0:14:42.06:0,42,537	0/0:14,0:14:37.36:0,37,503	0/0:13,0:13:39.12:0,39,542	0/0:31,0:31:79.11:0,79,1081	0/0:20,0:20:57.16:0,57,793	0/0:26,0:27:58.34:0,58,798	0/0:15,0:15:39.94:0,40,474	0/0:12,0:12:30:0,30,385	1/1:12,0:12:32.84:250,33,0	1/1:17,1:18:44.82:351,45,0	1/1:16,0:16:35.85:278,36,0	0/0:14,0:14:37.33:0,37,465	0/0:25,0:25:72.69:0,73,974	0/0:19,0:18:54.05:0,54,676	0/0:4,0:4:12.04:0,12,172
chr10	46246314	.	TTA	T	4430	PASS	AB=0.972;AC=16;AF=0.286;AN=56;BaseQRankSum=13.675;DP=495;FS=0.000;HRun=0;HaplotypeScore=80.7261;InbreedingCoeff=0.8191;MQ=75.12;MQ0=0;MQRankSum=-0.711;QD=28.40;ReadPosRankSum=4.048;VQSLOD=6.2617;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,25:28:63.20:967,63,0	0/0:4,0:4:12.02:0,12,177	0/0:21,0:20:40.99:0,41,546	0/0:14,0:13:32.50:0,33,335	0/0:23,0:23:69.10:0,69,1234	0/1:16,1:16:17:72,0,17	0/1:26,0:26:16.21:50,0,16	0/0:26,0:25:69.09:0,69,1124	1/1:0,14:14:33.11:525,33,0	0/0:18,0:18:54.12:0,54,911	0/0:16,0:16:48.11:0,48,827	1/1:0,11:11:27.09:428,27,0	1/1:0,14:16:42.13:634,42,0	0/0:15,0:15:45.06:0,45,763	0/0:17,0:17:48.03:0,48,792	0/0:17,0:17:51.13:0,51,863	0/0:32,0:32:86.72:0,87,1567	0/0:21,0:21:60.18:0,60,1155	0/0:28,0:28:53.82:0,54,1187	0/0:15,0:15:42.04:0,42,689	0/0:12,0:12:30:0,30,525	1/1:0,12:12:36.03:515,36,0	1/1:1,15:16:45.11:689,45,0	1/1:0,16:16:36.07:549,36,0	0/0:13,0:13:39.03:0,39,635	0/0:25,0:25:72.23:0,72,1335	0/0:18,0:17:54.11:0,54,962	0/0:4,0:4:12.04:0,12,242
chr10	46246315	.	TA	T	1096.07	PASS	AB=0.978;AC=18;AF=0.321;AN=56;BaseQRankSum=14.221;DP=492;FS=2.395;HRun=11;HaplotypeScore=81.3100;InbreedingCoeff=0.6571;MQ=75.19;MQ0=0;MQRankSum=2.348;QD=5.71;ReadPosRankSum=2.139;VQSLOD=2.1145;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:28:55.16:221,55,0	0/0:4,0:4:9.01:0,9,89	0/1:19,2:20:4.17:4,0,147	0/1:15,0:13:9.58:10,0,155	0/0:23,0:23:32.50:0,33,550	0/1:17,0:16:17.71:124,0,18	0/1:26,0:26:34.07:170,0,34	0/0:27,0:26:51.11:0,51,529	1/1:14,0:14:29.13:119,29,0	0/0:18,0:18:39.09:0,39,410	0/0:15,0:15:39.08:0,39,407	1/1:11,0:11:23.78:97,24,0	1/1:16,0:16:36.50:146,36,0	0/0:15,0:15:36.07:0,36,374	0/0:14,1:16:23.26:0,23,412	0/0:17,0:17:48.05:0,48,477	0/0:27,4:31:56.05:0,56,778	0/0:20,0:20:60.13:0,60,629	0/0:25,2:27:10.98:0,11,509	0/0:14,1:15:8.44:0,8,294	0/0:11,0:11:24.06:0,24,256	1/1:12,0:12:29.49:127,29,0	1/1:16,0:16:37.50:155,37,0	1/1:16,0:16:29.46:123,29,0	0/0:12,0:12:5.42:0,5,257	0/0:25,0:26:65.98:0,66,672	0/0:19,0:18:42.10:0,42,447	0/0:4,0:4:12.03:0,12,128
chr10	46246448	.	GA	G	1602.79	PASS	AB=0.911;AC=15;AF=0.268;AN=56;BaseQRankSum=11.078;DP=622;FS=23.377;HRun=13;HaplotypeScore=82.0539;InbreedingCoeff=0.6503;MQ=75.72;MQ0=0;MQRankSum=0.093;QD=7.45;ReadPosRankSum=1.752;VQSLOD=0.7263;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,1:43:62.02:0,62,732	0/0:7,0:7:15.02:0,15,146	0/0:11,0:12:14.85:0,15,113	0/1:16,0:16:0.54:1,0,123	0/1:22,3:25:1.80:2,0,285	0/0:19,0:19:44.92:0,45,414	0/0:28,1:35:52.79:0,53,619	1/1:14,13:28:15.24:257,15,0	0/0:15,0:19:44.56:0,45,384	0/0:13,0:17:32.52:0,33,274	0/1:7,1:9:1.10:1,0,123	0/0:20,0:20:52.03:0,52,437	0/0:29,1:30:47.11:0,47,591	0/0:23,0:23:47.45:0,47,405	0/0:27,3:30:10.20:0,10,405	0/0:21,2:24:16.09:0,16,457	0/1:34,4:38:12.19:12,0,661	0/0:25,1:27:29.64:0,30,446	1/1:4,15:19:44.44:322,44,0	1/1:4,10:14:17.59:195,18,0	1/1:3,20:23:50.61:371,51,0	0/0:12,0:13:29.88:0,30,277	0/0:13,0:14:29.87:0,30,271	0/0:28,0:28:76.30:0,76,705	0/0:8,0:10:20.82:0,21,180	0/0:34,2:36:47.28:0,47,560	1/1:4,32:35:83.47:612,83,0	0/1:5,1:6:3.88:4,0,128
chr10	46247131	.	CTA	C	8536.48	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=18.919;DP=680;FS=0.645;HRun=0;HaplotypeScore=100.0718;InbreedingCoeff=0.9999;MQ=73.69;MQ0=1;MQRankSum=-1.152;QD=39.34;ReadPosRankSum=4.772;VQSLOD=6.9878;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,31:31:84.29:1286,84,0	0/0:14,0:14:42.13:0,42,765	0/0:24,0:24:54.66:0,55,1189	0/0:13,0:13:33.11:0,33,634	0/0:32,0:32:91.99:0,92,1754	1/1:1,23:25:69.23:1051,69,0	1/1:0,25:25:63.21:964,63,0	0/0:39,0:39:99:0,111,2141	1/1:1,22:23:57.19:873,57,0	0/0:19,0:19:54.19:0,54,1040	0/0:21,0:21:60.21:0,60,1149	1/1:0,27:27:69.23:1056,69,0	1/1:0,28:28:72.24:1102,72,0	0/0:26,0:26:78.27:0,78,1497	0/0:26,0:26:78.25:0,78,1465	0/0:25,0:25:75.26:0,75,1429	0/0:29,0:29:87.30:0,87,1680	0/0:26,0:26:72.21:0,72,1329	0/0:20,0:20:57.20:0,57,1097	0/0:25,0:25:75.23:0,75,1383	0/0:24,0:23:66.21:0,66,1229	1/1:1,22:23:51.17:781,51,0	1/1:0,19:19:54.18:827,54,0	1/1:0,16:16:39.13:597,39,0	0/0:22,0:22:66.23:0,66,1266	0/0:32,0:32:96.33:0,96,1855	0/0:33,0:33:99:0,99,1881	0/0:13,0:13:39.13:0,39,753
chr10	46247596	.	A	AG	7600.33	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-10.186;DP=691;FS=0.657;HRun=5;HaplotypeScore=110.9214;InbreedingCoeff=0.9994;MQ=85.30;MQ0=0;MQRankSum=-3.152;QD=32.20;ReadPosRankSum=0.691;VQSLOD=4.1816;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,47:51:99:1539,117,0	0/0:9,0:9:27.07:0,27,290	0/0:22,0:22:44.75:0,45,464	0/0:24,0:24:59.60:0,60,631	0/0:24,0:24:66.17:0,66,709	1/1:0,23:23:63.16:809,63,0	1/1:0,22:22:57.19:750,57,0	0/0:32,0:32:90.21:0,90,955	1/1:0,23:23:60.20:788,60,0	0/0:21,0:21:57.13:0,57,601	0/0:24,0:24:63.16:0,63,677	1/1:4,23:27:54.17:701,54,0	1/1:8,13:21:45.14:576,45,0	0/0:24,0:24:66.17:0,66,709	0/0:34,0:34:96.24:0,96,1030	0/0:33,1:34:62.82:0,63,1025	0/0:37,0:37:93.16:0,93,969	0/0:13,0:13:30.08:0,30,322	0/0:22,0:22:54.13:0,54,580	0/0:31,0:31:81.20:0,81,870	0/0:26,0:26:63.15:0,63,677	1/1:1,24:25:72.23:937,72,0	1/1:2,18:20:48.16:632,48,0	1/1:0,24:24:66.21:868,66,0	0/0:24,0:24:57.14:0,57,612	0/0:22,0:22:63.16:0,63,677	0/0:23,0:23:57.14:0,57,613	0/0:9,0:9:24.06:0,24,258
chr10	46247708	.	A	AAGAC	15736.01	PASS	AB=0.771;AC=48;AF=0.889;AN=54;BaseQRankSum=-6.667;DP=619;FS=6.810;HRun=0;HaplotypeScore=145.5157;InbreedingCoeff=0.6015;MQ=71.24;MQ0=0;MQRankSum=-4.020;QD=28.51;ReadPosRankSum=4.481;VQSLOD=4.3283;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:18:8.53:52,9,0	1/1:4,15:19:24.07:590,24,0	0/0:26,0:25:44.93:0,45,540	0/0:23,0:20:27.08:0,27,401	1/1:7,28:36:48.10:1088,48,0	1/1:14,0:14:6.01:62,6,0	1/1:21,0:21:9:82,9,0	1/1:17,28:48:93.19:1570,93,0	1/1:14,0:14:2.94:25,3,0	1/1:6,23:31:72.18:1469,72,0	0/1:3,16:19:5.56:523,0,6	1/1:23,0:23:5.99:50,6,0	1/1:14,0:14:9.45:73,9,0	1/1:6,10:16:27.09:662,27,0	1/1:7,19:26:48.16:1180,48,0	1/1:2,20:24:42.14:1032,42,0	1/1:3,21:24:42.14:1032,42,0	1/1:1,15:17:24.08:590,24,0	1/1:10,12:22:34.99:766,35,0	1/1:7,21:30:33.11:776,33,0	1/1:4,23:27:45.15:1106,45,0	./.	0/1:17,0:17:0:0,0,0	1/1:17,0:17:5.96:35,6,0	1/1:4,15:19:27.09:664,27,0	1/1:4,17:22:54.14:1131,54,0	1/1:8,20:29:35.74:884,36,0	1/1:0,5:5:12.04:295,12,0
chr10	46248133	.	G	GA	3062.23	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=14.017;DP=486;FS=2.108;HRun=8;HaplotypeScore=75.7411;InbreedingCoeff=0.9928;MQ=71.67;MQ0=1;MQRankSum=-0.230;QD=23.20;ReadPosRankSum=3.942;VQSLOD=4.3801;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,25:32:32.42:849,32,0	0/0:6,0:6:18.01:0,18,165	0/0:19,0:18:35.97:0,36,323	0/0:11,0:11:18:0,18,164	0/0:31,0:31:69.01:0,69,632	1/1:1,18:20:39.07:435,39,0	1/1:1,11:12:30.09:343,30,0	0/0:28,0:28:69:0,69,621	1/1:4,9:13:21.06:242,21,0	0/0:25,0:25:57.02:0,57,522	0/0:12,0:12:36.01:0,36,325	1/1:1,8:9:24.06:265,24,0	1/1:2,9:11:24.07:277,24,0	0/0:12,0:13:26.05:0,26,226	0/0:14,0:14:34.25:0,34,322	0/0:19,0:19:51.03:0,51,467	0/0:25,0:25:69.03:0,69,631	0/0:25,0:25:68.99:0,69,623	0/0:17,0:17:33.01:0,33,302	0/0:18,0:18:48.03:0,48,439	0/0:13,0:13:36.02:0,36,329	1/1:1,10:11:27.08:312,27,0	1/1:1,14:15:33.10:381,33,0	1/1:1,7:8:15.04:173,15,0	0/0:13,0:13:26.15:0,26,245	0/0:31,0:31:90.04:0,90,824	0/0:18,0:18:51.02:0,51,466	0/0:15,0:15:38.98:0,39,349
chr10	46248249	.	TA	T	3980.29	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=13.490;DP=488;FS=4.434;HRun=6;HaplotypeScore=46.4119;InbreedingCoeff=0.9540;MQ=76.09;MQ0=0;MQRankSum=-1.287;QD=28.64;ReadPosRankSum=2.550;VQSLOD=4.1847;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,21:22:60.07:629,60,0	0/0:6,0:6:18.06:0,18,237	0/0:14,0:14:29.77:0,30,389	0/1:5,0:5:0.81:1,0,34	0/0:28,0:28:78.24:0,78,1012	1/1:0,21:21:63.16:677,63,0	1/1:0,14:14:33.08:355,33,0	0/0:26,0:26:69.21:0,69,881	1/1:0,10:10:27.07:290,27,0	0/0:23,0:23:63.20:0,63,823	0/0:14,0:14:42.14:0,42,553	1/1:0,12:12:33.08:354,33,0	1/1:0,16:16:45.11:484,45,0	0/0:17,0:17:45.15:0,45,592	0/0:14,0:14:42.14:0,42,552	0/0:19,0:19:57.16:0,57,723	0/0:19,0:19:54.18:0,54,711	0/0:23,0:23:69.22:0,69,908	0/0:23,0:23:69.21:0,69,883	0/0:21,0:21:63.18:0,63,799	0/0:16,0:16:45.15:0,45,592	1/1:0,12:12:36.09:385,36,0	1/1:0,17:17:51.13:548,51,0	1/1:0,10:10:24.06:258,24,0	0/0:22,0:22:63.20:0,63,829	0/0:20,0:20:57.18:0,57,737	0/0:32,0:32:96.31:0,96,1263	0/0:12,0:12:33.11:0,33,425
chr10	46248491	.	A	ATT	5604.13	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=17.015;DP=713;FS=6.368;HRun=9;HaplotypeScore=113.7124;InbreedingCoeff=0.9995;MQ=70.82;MQ0=1;MQRankSum=-1.152;QD=24.16;ReadPosRankSum=-0.745;VQSLOD=3.9163;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:34,0:34:78.42:859,78,0	0/0:8,0:8:24.06:0,24,255	0/0:20,0:18:35.27:0,35,319	0/0:25,0:21:44.24:0,44,440	0/0:19,0:19:45.07:0,45,470	1/1:31,0:31:39.77:731,40,0	1/1:26,0:27:69.17:815,69,0	0/0:48,0:48:99:0,114,1187	1/1:21,0:21:37.72:426,38,0	0/0:36,0:36:96.21:0,96,1021	0/0:17,0:17:39.08:0,39,415	1/1:20,0:20:41.46:419,41,0	1/1:27,3:29:64.95:776,65,0	0/0:20,0:20:51.09:0,51,534	0/0:30,0:30:66.12:0,66,702	0/0:28,0:28:69.14:0,69,734	0/0:19,0:19:51.13:0,51,543	0/0:21,0:21:48.06:0,48,500	0/0:21,0:21:60.06:0,60,607	0/0:19,0:19:48.12:0,48,511	0/0:30,0:30:81.15:0,81,843	1/1:19,0:18:45.45:466,45,0	1/1:15,0:16:30.62:313,31,0	1/1:33,1:34:70.21:800,70,0	0/0:20,0:20:57.11:0,57,597	0/0:35,0:35:64.07:0,64,891	0/0:41,0:42:99:0,108,1129	0/0:23,0:23:63.06:0,63,640
chr10	46248499	.	TTG	T	1678.64	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=16.745;DP=730;FS=6.276;HRun=0;HaplotypeScore=120.4364;InbreedingCoeff=0.9885;MQ=70.85;MQ0=1;MQRankSum=0.053;QD=7.39;ReadPosRankSum=2.496;VQSLOD=2.7014;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:32,1:33:70.79:335,71,0	0/0:10,0:10:30.09:0,30,450	0/0:24,0:20:53.96:0,54,638	0/0:28,0:23:48.75:0,49,713	0/0:20,0:20:48.12:0,48,770	1/1:28,0:28:47.36:249,47,0	1/1:25,0:25:46.42:279,46,0	0/0:50,0:50:99:0,141,2029	1/1:20,1:21:18.16:190,18,0	0/0:42,0:42:99:0,123,1826	0/0:15,0:15:39.11:0,39,647	1/1:22,1:23:9.88:131,10,0	1/1:27,0:26:20.97:168,21,0	0/0:22,0:22:60.10:0,60,864	0/0:30,0:30:81.20:0,81,1243	0/0:34,0:34:81.15:0,81,1358	0/0:17,0:17:51.17:0,51,845	0/0:23,0:23:60.07:0,60,874	0/0:23,0:23:69.09:0,69,921	0/0:16,0:16:48.16:0,48,795	0/0:28,0:28:84.26:0,84,1331	1/1:20,0:19:17.33:139,17,0	1/1:16,0:16:23.45:112,23,0	1/1:33,1:34:52.72:289,53,0	0/0:19,0:19:57.17:0,57,905	0/0:35,0:35:99:0,105,1625	0/0:43,0:43:99:0,126,1923	0/0:24,0:24:71.99:0,72,1036
chr10	46248501	.	GT	G	3543.53	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=17.093;DP=722;FS=7.905;HRun=9;HaplotypeScore=99.8185;InbreedingCoeff=0.9988;MQ=71.63;MQ0=1;MQRankSum=-2.671;QD=15.75;ReadPosRankSum=2.694;VQSLOD=3.3903;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:32,0:32:68.90:583,69,0	0/0:10,0:10:30.10:0,30,418	0/0:23,0:19:50.90:0,51,580	0/0:30,0:25:33.90:0,34,725	0/0:22,0:22:54.17:0,54,733	1/1:28,0:28:64.63:550,65,0	1/1:23,0:23:52.90:510,53,0	0/0:49,0:49:99:0,126,1740	1/1:23,0:23:20.86:244,21,0	0/0:43,0:43:99:0,123,1695	0/0:14,0:14:39.13:0,39,546	1/1:20,2:22:37.29:269,37,0	1/1:25,2:26:29:377,29,0	0/0:20,0:20:57.17:0,57,756	0/0:30,0:30:81.26:0,81,1115	0/0:36,0:36:57.61:0,58,1205	0/0:17,0:17:51.17:0,51,712	0/0:21,0:21:57.19:0,57,791	0/0:21,0:21:57.17:0,57,764	0/0:16,0:16:48.16:0,48,666	0/0:27,0:27:81.25:0,81,1114	1/1:17,3:19:41:304,41,0	1/1:14,2:16:25.41:211,25,0	1/1:33,1:34:61.93:496,62,0	0/0:18,0:18:51.17:0,51,714	0/0:36,0:36:99:0,102,1410	0/0:43,0:43:99:0,129,1752	0/0:21,0:21:60.20:0,60,829
chr10	46248502	.	T	TTG	6955.42	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=16.402;DP=729;FS=6.930;HRun=0;HaplotypeScore=103.9487;InbreedingCoeff=0.9990;MQ=70.37;MQ0=1;MQRankSum=-3.826;QD=29.98;ReadPosRankSum=2.286;VQSLOD=6.4438;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,21:32:59.56:1136,60,0	0/0:10,0:10:30.10:0,30,458	0/0:22,0:18:51.11:0,51,627	0/0:29,0:24:51.48:0,51,809	0/0:24,0:24:54.17:0,54,794	1/1:2,0:27:59.43:636,59,0	1/1:3,1:24:53.45:630,53,0	0/0:46,0:46:99:0,129,1917	1/1:5,18:25:24.78:631,25,0	0/0:43,0:43:99:0,123,1840	0/0:14,0:14:39.13:0,39,597	1/1:3,17:21:41.12:583,41,0	1/1:8,17:28:57.92:951,58,0	0/0:20,0:20:57.18:0,57,834	0/0:31,0:31:81.27:0,81,1215	0/0:38,0:38:83.76:0,84,1350	0/0:17,0:17:51.17:0,51,780	0/0:21,0:21:60.19:0,60,896	0/0:21,0:21:60.17:0,60,854	0/0:16,0:16:48.16:0,48,733	0/0:27,0:27:81.27:0,81,1221	1/1:5,16:21:41.89:705,42,0	1/1:5,13:18:21.43:461,21,0	1/1:6,27:34:72.15:1221,72,0	0/0:18,0:18:54.17:0,54,808	0/0:36,0:36:99:0,102,1537	0/0:43,0:43:99:0,129,1930	0/0:21,0:21:60.20:0,60,918
chr10	46250054	.	CTTA	C	1149.16	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=1.869;DP=640;FS=0.000;HRun=0;HaplotypeScore=104.9406;InbreedingCoeff=0.9693;MQ=73.14;MQ0=0;MQRankSum=-3.097;QD=39.63;ReadPosRankSum=-5.188;VQSLOD=2.8096;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,138,3101	0/0:9,0:9:27.09:0,27,594	0/0:18,0:16:41.16:0,41,848	0/0:21,0:21:54.64:0,55,1014	0/0:16,0:16:45.15:0,45,992	0/0:20,0:20:60.20:0,60,1279	0/0:32,0:32:93.32:0,93,2113	1/1:1,28:29:81.19:1244,81,0	0/0:20,0:20:60.19:0,60,1317	0/0:27,0:27:81.27:0,81,1761	0/0:15,0:15:45.15:0,45,986	0/0:23,0:23:66.23:0,66,1504	0/0:25,0:25:75.22:0,75,1578	0/0:22,0:22:66.21:0,66,1451	0/0:27,0:27:81.28:0,81,1829	0/0:23,0:23:69.24:0,69,1557	0/0:38,0:38:99:0,108,2401	0/0:31,0:31:90.27:0,90,1963	0/0:16,0:16:45.15:0,45,1015	0/0:18,0:18:51.17:0,51,1167	0/0:32,0:32:96.26:0,96,2145	0/0:18,0:18:54.09:0,54,1122	0/0:17,0:17:48.16:0,48,1059	0/0:21,0:21:57.16:0,57,1215	0/0:22,0:22:66.23:0,66,1476	0/0:22,0:22:66.21:0,66,1461	0/0:26,0:26:78.27:0,78,1775	0/0:4,0:4:12.04:0,12,275
chr10	46251100	.	A	AGT	566.74	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-4.721;DP=671;FS=3.578;HRun=0;HaplotypeScore=111.9219;InbreedingCoeff=0.8066;MQ=72.71;MQ0=1;MQRankSum=-1.716;QD=18.28;ReadPosRankSum=-3.328;VQSLOD=3.1422;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:27:54:0,54,646	0/0:12,0:12:33.10:0,33,409	0/0:29,0:24:32.76:0,33,374	0/0:15,0:14:24.93:0,25,274	0/0:30,0:30:75.24:0,75,930	0/0:29,0:29:78.25:0,78,967	0/0:23,0:23:57.17:0,57,694	1/1:16,15:31:7.94:649,8,0	0/0:27,0:27:69.22:0,69,856	0/0:41,0:41:99:0,105,1271	0/0:22,1:23:7.96:0,8,620	0/0:17,0:17:42.13:0,42,521	0/0:25,0:25:69.22:0,69,855	0/0:23,0:23:57.18:0,57,707	0/0:22,0:22:63.17:0,63,755	0/0:29,0:29:81.25:0,81,1005	0/0:29,0:29:72.23:0,72,893	0/0:18,0:18:36.11:0,36,446	0/0:21,0:21:39.12:0,39,483	0/0:12,0:12:27.08:0,27,335	0/0:21,0:21:51.16:0,51,632	0/0:32,0:32:87.27:0,87,1078	0/0:25,0:25:57.17:0,57,694	0/0:20,0:20:51.14:0,51,618	0/0:28,0:28:66.21:0,66,817	0/0:26,0:26:69.22:0,69,856	0/0:30,0:31:81.09:0,81,981	0/0:5,0:5:9.03:0,9,112
chr10	46251669	.	CCCTATTGAAATACCATGA	C	36536.22	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=6.039;DP=593;FS=20.722;HRun=0;HaplotypeScore=284.5952;InbreedingCoeff=0.8695;MQ=81.60;MQ0=0;MQRankSum=-7.927;QD=67.41;ReadPosRankSum=6.785;VQSLOD=3.1053;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,31:40:36.06:1546,36,0	1/1:4,6:10:12.04:592,12,0	0/0:31,0:32:35.46:0,35,1796	0/0:19,0:19:18.45:0,18,2513	1/1:4,15:19:26.90:984,27,0	1/1:6,23:29:45.15:2202,45,0	1/1:7,10:17:15.05:719,15,0	1/1:12,12:24:35.99:508,36,0	1/1:5,11:16:27.09:1332,27,0	1/1:4,10:14:27.04:963,27,0	1/1:4,14:18:36.08:1418,36,0	1/1:9,19:28:48.16:2367,48,0	1/1:3,13:16:27.09:1332,27,0	1/1:4,16:20:45.15:2219,45,0	1/1:5,27:32:69.24:3403,69,0	1/1:4,20:24:48.16:2367,48,0	1/1:10,20:30:24.08:1184,24,0	1/1:4,7:11:12.04:592,12,0	1/1:13,5:18:14.99:455,15,0	1/1:4,13:17:33.07:1265,33,0	1/1:5,9:14:9.03:420,9,0	1/1:2,21:23:57.20:2684,57,0	1/1:2,11:13:21.07:904,21,0	1/1:8,10:18:6.02:269,6,0	1/1:6,14:20:30.10:1480,30,0	1/1:10,20:30:63.01:2075,63,0	1/1:8,24:32:48.16:2367,48,0	1/1:2,7:9:18.06:888,18,0
chr10	46253024	.	G	GTA	202.04	PASS	AB=0.907;AC=5;AF=0.089;AN=56;BaseQRankSum=6.573;DP=538;FS=9.496;HRun=0;HaplotypeScore=80.5067;InbreedingCoeff=0.3330;MQ=45.21;MQ0=76;MQRankSum=-1.456;QD=2.08;ReadPosRankSum=-1.281;VQSLOD=0.7888;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:21:15.66:0,16,187	0/0:8,0:7:17.96:0,18,145	0/0:10,0:3:8.87:0,9,69	0/0:11,0:4:5.99:0,6,50	0/0:7,0:5:11.97:0,12,96	0/0:16,0:16:38.46:0,38,296	0/0:26,0:21:30.68:0,31,228	0/0:24,0:22:19.92:0,20,201	0/0:22,0:20:39.95:0,40,294	0/0:19,0:16:30.57:0,31,345	0/0:13,0:12:26.91:0,27,212	0/0:26,0:24:27.48:0,27,201	0/0:17,0:12:29.09:0,29,223	0/0:11,0:10:17.95:0,18,143	0/0:26,0:25:59.60:0,60,452	0/0:19,0:14:21.18:0,21,171	0/0:22,0:19:40.28:0,40,291	0/0:17,0:15:31.49:0,31,228	0/1:15,0:12:19.53:122,0,20	1/1:17,0:16:20.97:173,21,0	0/1:30,19:39:20.81:21,0,85	0/0:14,0:10:11.97:0,12,96	0/0:11,0:11:20.72:0,21,162	0/0:47,0:40:87.23:0,87,705	0/0:13,0:10:20.80:0,21,154	0/0:22,0:22:61.81:0,62,492	0/1:16,0:11:0.58:1,0,122	0/0:12,0:9:14.86:0,15,107
chr10	46255158	.	CCTCTCTCT	C	113.60	PASS	AB=0.874;AC=10;AF=0.250;AN=40;BaseQRankSum=1.836;DP=362;FS=11.281;HRun=0;HaplotypeScore=118.8403;InbreedingCoeff=0.3615;MQ=27.62;MQ0=14;MQRankSum=1.136;QD=1.34;ReadPosRankSum=-0.262;VQSLOD=1.8623;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,0:8:0.43:1,0,0	0/0:7,0:7:15.01:0,15,288	./.	./.	0/0:29,0:27:1.88:0,2,25	./.	0/0:18,0:17:3.90:0,4,70	0/0:20,0:16:9.03:0,9,174	0/1:8,0:14:26.11:100,0,26	0/0:21,0:20:51.09:0,51,1319	./.	1/1:10,0:8:3.01:52,3,0	1/1:4,7:11:3.01:57,3,0	0/0:17,0:17:6.02:0,6,129	0/0:19,0:18:12.51:0,13,226	0/1:13,0:12:0:0,0,0	0/0:3,0:4:3.48:0,3,94	0/0:8,0:7:21.05:0,21,598	0/0:8,0:7:4.26:0,4,87	./.	./.	0/1:10,1:11:0.04:0,0,0	0/1:14,0:15:0:0,0,0	./.	./.	0/0:21,0:19:27.96:0,28,613	0/0:21,0:19:38.92:0,39,833	0/0:8,0:5:6.01:0,6,104
chr10	46255349	.	AC	A	4116.46	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=14.464;DP=568;FS=2.849;HRun=3;HaplotypeScore=73.7981;InbreedingCoeff=0.9757;MQ=71.72;MQ0=0;MQRankSum=-0.424;QD=32.67;ReadPosRankSum=3.203;VQSLOD=4.2144;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,99,1368	0/0:11,0:11:33.11:0,33,470	0/0:17,0:18:35.99:0,36,280	0/0:13,0:13:15.55:0,16,166	0/0:19,0:19:48.13:0,48,648	0/0:12,0:11:33.10:0,33,456	0/0:32,0:32:87.27:0,87,1227	0/0:22,0:22:54.17:0,54,754	1/1:1,20:21:60.19:740,60,0	0/0:18,0:18:51.17:0,51,710	0/0:9,0:9:24.08:0,24,334	1/1:0,16:16:42.13:520,42,0	1/1:0,24:23:63.20:779,63,0	0/0:27,0:27:81.26:0,81,1136	0/0:30,0:30:87.29:0,87,1226	0/0:20,0:20:54.12:0,54,731	0/0:36,0:36:99:0,99,1398	0/0:24,0:24:68.91:0,69,879	0/0:17,0:17:44.94:0,45,578	0/0:15,0:15:42.13:0,42,584	0/0:22,0:22:60.19:0,60,842	1/1:3,18:21:51.16:631,51,0	1/1:0,17:17:45.14:557,45,0	1/1:0,27:27:72.23:889,72,0	0/0:22,0:22:66.18:0,66,888	0/0:17,0:17:48.16:0,48,680	0/0:19,0:19:54.18:0,54,763	0/0:3,0:3:6.02:0,6,86
chr10	46255841	.	T	TGGCCA	38676.33	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-7.205;DP=673;FS=8.288;HRun=0;HaplotypeScore=132.5287;InbreedingCoeff=0.9779;MQ=85.67;MQ0=0;MQRankSum=-11.920;QD=62.79;ReadPosRankSum=4.825;VQSLOD=5.8729;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,32:42:69.24:2103,69,0	1/1:1,11:12:26.94:844,27,0	0/0:32,0:32:90.31:0,90,1789	0/0:25,0:25:68.99:0,69,1282	1/1:6,25:32:50.91:1323,51,0	1/1:2,12:15:33.11:920,33,0	1/1:11,18:31:60.20:1761,60,0	1/1:11,21:38:93.26:2448,93,0	1/1:4,17:23:54.19:1686,54,0	1/1:7,15:23:66.21:1782,66,0	1/1:4,6:12:14.97:319,15,0	1/1:3,24:28:75.26:2342,75,0	1/1:5,15:21:45.15:1345,45,0	1/1:4,15:20:54.12:1568,54,0	1/1:2,19:21:60.21:1823,60,0	1/1:1,14:17:39.13:1221,39,0	1/1:5,31:42:99:3048,99,0	1/1:2,19:21:48.16:1447,48,0	1/1:6,7:16:45.10:1152,45,0	1/1:2,27:29:72.11:1805,72,0	1/1:6,20:29:54.66:1575,55,0	1/1:6,9:16:18.06:504,18,0	1/1:5,11:16:24.04:507,24,0	1/1:5,26:31:66.23:1951,66,0	1/1:5,16:21:33.11:916,33,0	1/1:5,20:29:78.20:1794,78,0	1/1:4,17:21:66.23:2023,66,0	1/1:1,5:7:15.05:469,15,0
chr10	46256578	.	GT	G	9911.52	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=13.580;DP=768;FS=17.120;HRun=2;HaplotypeScore=75.0020;InbreedingCoeff=0.9987;MQ=78.21;MQ0=0;MQRankSum=-2.044;QD=33.94;ReadPosRankSum=3.551;VQSLOD=3.3171;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:62,0:62:99:0,184,2713	1/1:0,9:9:27.09:351,27,0	0/0:16,0:16:48.16:0,48,713	0/0:17,0:17:47.92:0,48,670	1/1:2,25:27:63.05:759,63,0	0/0:20,0:19:60.20:0,60,893	0/0:24,0:24:72.23:0,72,1060	0/0:26,0:26:75.25:0,75,1108	0/0:29,0:29:84.27:0,84,1228	1/1:1,28:29:81.26:1052,81,0	1/1:0,14:14:42.14:545,42,0	0/0:38,0:38:99:0,108,1593	0/0:35,0:35:99:0,99,1427	1/1:2,38:40:99:1324,102,0	1/1:0,37:37:96.31:1246,96,0	1/1:1,26:27:78.25:1013,78,0	1/1:0,33:33:90.29:1169,90,0	1/1:0,18:18:39.13:506,39,0	0/0:31,0:31:93.28:0,93,1337	0/0:16,0:16:48.16:0,48,718	0/0:51,0:51:99:0,150,2203	0/0:25,0:25:75.25:0,75,1114	0/0:20,0:20:60.20:0,60,897	0/0:41,0:41:99:0,120,1778	1/1:1,16:17:33.11:428,33,0	1/1:0,34:34:99:1285,99,0	0/0:25,0:25:75.25:0,75,1123	1/1:0,7:7:18.06:234,18,0
chr10	46257019	.	CT	C	406	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=1.559;DP=467;FS=4.983;HRun=11;HaplotypeScore=81.4478;InbreedingCoeff=0.6007;MQ=70.63;MQ0=0;MQRankSum=0.604;QD=15.04;ReadPosRankSum=-4.930;VQSLOD=2.6780;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:72.10:0,72,727	0/0:4,0:4:5.91:0,6,37	0/0:15,0:13:11.40:0,11,78	0/0:12,0:7:6.38:0,6,37	0/0:16,0:14:1.43:0,1,81	0/0:21,0:21:54.06:0,54,542	0/0:9,0:9:24.06:0,24,256	1/1:5,21:27:64.75:500,65,0	0/0:23,0:23:66.08:0,66,677	0/0:20,0:18:34.71:0,35,239	0/0:12,0:12:14.29:0,14,114	0/0:20,0:21:60.15:0,60,637	0/0:21,0:21:39.05:0,39,402	0/0:11,0:11:13.15:0,13,93	0/0:11,0:11:9.96:0,10,50	0/0:14,0:14:22.95:0,23,174	0/0:25,0:23:31.31:0,31,199	0/0:11,0:11:25.97:0,26,163	0/0:20,1:21:20.45:0,20,405	0/0:25,0:25:54.14:0,54,576	0/0:10,0:10:15.02:0,15,151	0/0:6,0:6:12.02:0,12,122	0/0:21,0:21:44.59:0,45,499	0/0:11,0:11:24.03:0,24,256	0/0:10,0:10:14.57:0,15,87	0/0:17,0:17:21.35:0,21,106	0/0:26,1:25:41.48:0,41,623	0/0:18,0:18:37.36:0,37,213
chr10	46257030	.	TAAAGAC	T	2551.83	PASS	AB=0.744;AC=10;AF=0.179;AN=56;BaseQRankSum=9.748;DP=425;FS=85.731;HRun=0;HaplotypeScore=111.0129;InbreedingCoeff=-0.2404;MQ=60.96;MQ0=0;MQRankSum=-8.689;QD=18.36;ReadPosRankSum=2.368;VQSLOD=-0.4728;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:81.25:0,81,2635	0/0:1,0:1:3.01:0,3,97	0/0:10,0:6:15.05:0,15,304	0/0:10,0:5:5:0,5,148	0/1:13,5:16:99:240,0,948	0/0:22,0:22:41.38:0,41,2037	0/0:11,0:11:33.11:0,33,1137	0/0:32,0:32:94.57:0,95,2880	0/0:24,0:24:72.22:0,72,2353	0/1:7,8:14:99:510,0,379	0/1:9,3:12:99:163,0,600	0/0:23,0:23:69.13:0,69,2310	0/0:15,0:15:45.15:0,45,1500	0/0:2,0:2:6.02:0,6,206	0/1:4,0:7:99:157,0,287	0/1:8,3:11:99:180,0,733	0/1:21,4:23:99:216,0,1565	0/1:6,6:12:99:396,0,463	0/0:23,0:23:69.24:0,69,2225	0/0:20,0:20:57.18:0,57,1924	0/0:5,0:5:15.03:0,15,439	0/0:6,0:6:18.04:0,18,492	0/0:20,0:20:57.20:0,57,1839	0/0:9,0:9:23.96:0,24,825	0/1:12,2:14:99:102,0,842	0/1:7,6:13:99:321,0,369	0/0:25,0:23:75.26:0,75,2516	0/1:5,6:11:99:410,0,481
chr10	46257056	.	A	AAG	76.10	PASS	AB=0.825;AC=2;AF=0.036;AN=56;BaseQRankSum=4.180;DP=416;FS=3.871;HRun=0;HaplotypeScore=70.1395;InbreedingCoeff=-0.0425;MQ=61.04;MQ0=0;MQRankSum=-4.017;QD=3.17;ReadPosRankSum=3.463;VQSLOD=1.6251;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:78.23:0,78,1222	0/0:2,0:2:6.02:0,6,98	0/0:16,0:13:36.07:0,36,522	0/0:11,0:9:18.06:0,18,280	0/0:11,1:12:33.11:0,33,538	0/0:22,0:22:66.23:0,66,1070	0/0:15,0:15:45.15:0,45,723	0/0:39,0:39:99:0,108,1729	0/0:16,0:16:45.15:0,45,724	0/0:10,0:10:27.09:0,27,428	0/0:14,0:14:39.12:0,39,604	0/0:17,0:17:48.16:0,48,777	0/0:11,0:11:33.11:0,33,532	0/0:6,0:6:18.06:0,18,285	0/0:6,0:6:18.06:0,18,293	0/0:10,0:10:27.09:0,27,437	0/0:25,0:23:63.22:0,63,1022	0/0:10,0:10:27.09:0,27,434	0/0:26,0:26:78.24:0,78,1214	0/0:16,0:16:48.15:0,48,751	0/0:8,0:8:24.08:0,24,392	0/0:7,0:7:21.07:0,21,334	0/0:19,0:19:57.18:0,57,892	0/0:7,0:7:15.05:0,15,232	0/1:11,5:16:99:145,0,414	0/1:7,1:8:17.96:18,0,270	0/0:30,0:28:84.25:0,84,1329	0/0:9,0:9:27.02:0,27,406
chr10	46257057	.	T	TACACTGTAG	675.96	PASS	AB=0.887;AC=3;AF=0.054;AN=56;BaseQRankSum=4.464;DP=420;FS=1.617;HRun=0;HaplotypeScore=132.5288;InbreedingCoeff=-0.0620;MQ=60.81;MQ0=0;MQRankSum=-4.202;QD=19.88;ReadPosRankSum=2.805;VQSLOD=3.0332;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:78.23:0,78,2394	0/0:2,0:2:6.02:0,6,196	0/0:16,0:13:39.05:0,39,883	0/0:12,0:9:21.05:0,21,481	0/0:11,1:12:33.10:0,33,1074	0/0:22,0:22:66.23:0,66,2012	0/0:15,0:15:45.14:0,45,1312	0/0:40,0:40:99:0,111,3126	0/0:16,0:16:48.15:0,48,1327	0/0:11,0:11:30.04:0,30,741	0/0:14,0:14:39.12:0,39,1079	0/0:17,0:17:51.14:0,51,1468	0/0:11,0:11:33.11:0,33,938	0/0:6,0:6:18.03:0,18,496	0/0:6,0:6:18.06:0,18,587	0/0:10,0:10:30.09:0,30,876	0/0:25,0:23:63.22:0,63,2045	0/0:12,0:12:29.93:0,30,865	0/0:26,0:26:78.22:0,78,2094	0/0:16,0:16:45.15:0,45,1413	0/0:8,0:8:24.08:0,24,781	0/0:7,0:7:21.07:0,21,629	0/0:18,0:18:54.17:0,54,1602	0/0:7,0:7:17.98:0,18,360	0/1:11,5:16:99:598,0,714	0/1:8,1:9:99:109,0,544	0/0:29,0:27:87.25:0,87,2544	0/1:9,0:9:69.15:69,0,706
chr10	46257373	.	CA	C	9137.99	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=19.106;DP=760;FS=5.561;HRun=5;HaplotypeScore=97.2652;InbreedingCoeff=0.9954;MQ=85.62;MQ0=0;MQRankSum=-2.834;QD=30.56;ReadPosRankSum=4.297;VQSLOD=5.0568;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,135,1846	1/1:3,8:12:27.05:294,27,0	0/0:25,0:25:37.46:0,37,616	0/0:24,0:24:57.13:0,57,728	1/1:1,17:16:39.11:442,39,0	0/0:22,0:22:63.21:0,63,859	0/0:36,0:36:99:0,107,1440	0/0:28,0:28:81.27:0,81,1106	0/0:26,2:28:13.20:0,13,955	1/1:1,38:38:99:1290,114,0	1/1:0,19:19:54.15:612,54,0	0/0:28,0:28:81.26:0,81,1090	0/0:24,0:24:66.20:0,66,874	1/1:1,34:35:96.27:1089,96,0	1/1:0,25:25:75.21:851,75,0	1/1:3,35:38:99:1157,102,0	1/1:0,37:37:99:1123,99,0	1/1:3,17:20:51.15:579,51,0	0/0:30,0:30:84.26:0,84,1123	0/0:16,0:16:48.16:0,48,657	0/0:47,0:47:99:0,135,1832	0/0:18,0:18:48.15:0,48,638	0/0:25,0:25:69.23:0,69,943	0/0:35,0:34:99:0,102,1378	1/1:1,14:15:39.11:442,39,0	1/1:2,33:35:93.26:1055,93,0	0/0:28,0:27:78.26:0,78,1066	1/1:0,6:6:18.05:204,18,0
chr10	46258586	.	C	CACATACAT	11101.43	PASS	AB=1.000;AC=27;AF=0.482;AN=56;BaseQRankSum=-11.143;DP=808;FS=12.626;HRun=0;HaplotypeScore=206.6902;InbreedingCoeff=0.8692;MQ=63.50;MQ0=9;MQRankSum=-5.944;QD=29.29;ReadPosRankSum=-4.195;VQSLOD=2.8060;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:29.78:0,30,197	1/1:10,0:10:9.03:328,9,0	0/0:36,0:28:5.93:0,6,61	0/1:13,0:8:3.57:4,0,18	1/1:10,13:24:24.08:715,24,0	0/0:24,0:24:49.38:0,49,1008	0/0:24,0:24:18.06:0,18,364	1/1:43,0:43:56.20:576,56,0	0/0:46,0:46:48.92:0,49,314	1/1:12,22:37:60.15:1755,60,0	1/1:6,11:17:12.04:490,12,0	0/0:23,0:22:35.64:0,36,206	0/0:28,0:27:21.34:0,21,110	1/1:13,20:36:21.07:861,21,0	1/1:57,0:57:90.27:2310,90,0	1/1:9,17:28:21.07:862,21,0	1/1:15,12:28:14.38:615,14,0	1/1:4,12:17:15.05:555,15,0	0/0:20,0:20:21.02:0,21,430	0/0:29,0:29:57.15:0,57,1184	0/0:45,0:45:72.21:0,72,1522	0/0:29,0:29:50.17:0,50,281	0/0:27,0:27:20.79:0,21,133	0/0:19,0:19:5.87:0,6,35	1/1:8,10:20:9.50:370,10,0	1/1:13,22:37:61.84:1538,62,0	0/0:32,0:31:57.16:0,57,1273	1/1:8,3:11:3.01:123,3,0
chr10	46258590	.	T	TACCC	7813.86	PASS	AB=1.000;AC=25;AF=0.446;AN=56;BaseQRankSum=-1.203;DP=796;FS=1.501;HRun=0;HaplotypeScore=160.4426;InbreedingCoeff=0.1703;MQ=61.82;MQ0=10;MQRankSum=-6.436;QD=14.83;ReadPosRankSum=11.684;VQSLOD=2.6669;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,37:46:42.14:1150,42,0	0/1:9,0:9:30.62:31,0,135	0/0:33,0:25:67.50:0,67,1079	0/0:14,0:8:23.81:0,24,343	0/1:23,0:23:52.29:52,0,363	0/0:22,0:22:15.06:0,15,1073	0/0:22,0:22:60.20:0,60,1035	0/0:45,0:45:7.87:0,8,1202	1/1:4,40:45:66.09:1806,66,0	0/1:38,0:38:3.27:3,0,897	0/1:17,0:17:44.50:44,0,240	1/1:0,22:22:39:1067,39,0	1/1:0,29:28:26.71:735,27,0	0/1:36,0:36:63.87:64,0,576	0/1:58,0:58:88.51:89,0,1378	0/1:26,0:26:79.02:79,0,187	0/1:28,0:28:38.89:39,0,384	0/1:16,0:16:33.41:54,0,33	0/0:21,0:21:62.12:0,62,855	0/0:27,0:27:81.28:0,81,1471	0/0:44,0:44:99:0,126,2223	1/1:0,29:29:57.20:1561,57,0	1/1:2,23:27:29.45:819,29,0	1/1:1,18:21:6.02:164,6,0	0/1:20,0:20:16.30:16,0,362	0/1:36,0:35:39.92:40,0,752	0/0:31,0:30:90.31:0,90,1610	0/0:10,0:10:0.76:0,1,217
chr10	46258758	.	GT	G	5329.17	PASS	AB=0.787;AC=38;AF=0.679;AN=56;BaseQRankSum=4.494;DP=612;FS=0.793;HRun=13;HaplotypeScore=82.1455;InbreedingCoeff=0.6752;MQ=74.85;MQ0=1;MQRankSum=-2.351;QD=12.19;ReadPosRankSum=3.224;VQSLOD=5.0226;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,26:31:18.09:413,18,0	1/1:1,7:8:17.79:131,18,0	0/1:28,0:21:3.04:3,0,76	0/1:19,0:15:13.48:13,0,139	1/1:2,17:20:37.66:268,38,0	0/0:11,0:29:49.27:0,49,327	0/0:8,0:20:19.99:0,20,192	0/0:29,0:33:25.24:0,25,362	0/1:6,18:24:4.07:258,0,4	1/1:5,20:26:61.55:435,62,0	1/1:5,14:20:25.82:181,26,0	1/1:7,9:17:5.33:157,5,0	1/1:3,15:19:34.79:242,35,0	1/1:2,16:18:32.81:241,33,0	1/1:7,16:24:40.76:290,41,0	1/1:1,15:18:39.84:274,40,0	1/1:6,17:25:48.76:340,49,0	1/1:2,21:23:53.66:394,54,0	0/0:24,2:26:10.16:0,10,403	0/0:17,2:21:9.93:0,10,389	0/0:17,2:19:1.24:0,1,326	1/1:7,15:22:16.90:260,17,0	1/1:2,17:20:46.75:334,47,0	1/1:3,15:18:18.55:299,19,0	0/1:4,11:15:2.37:148,0,2	1/1:5,22:28:39.53:406,40,0	0/0:27,0:27:71.92:0,72,651	1/1:0,14:14:32.81:241,33,0
chr10	46261024	.	GAAA	G	6932.65	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=6.490;DP=524;FS=6.210;HRun=12;HaplotypeScore=115.1711;InbreedingCoeff=0.8094;MQ=42.73;MQ0=32;MQRankSum=-4.063;QD=16.01;ReadPosRankSum=2.350;VQSLOD=3.3594;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,26:30:35.97:862,36,0	1/1:7,0:7:2.95:20,3,0	1/1:18,0:3:0.46:0,0,0	0/0:21,1:2:3.01:0,3,57	1/1:14,3:16:30.08:290,30,0	0/0:3,0:18:38.87:0,39,335	0/0:7,0:24:44.64:0,45,329	0/0:14,0:26:35.59:0,36,260	1/1:3,10:13:27.08:341,27,0	1/1:15,3:17:41.78:367,42,0	1/1:17,0:17:14.26:102,14,0	1/1:5,14:19:24.03:303,24,0	1/1:4,16:18:36.03:435,36,0	1/1:24,0:23:44.57:322,45,0	1/1:28,0:27:41.57:285,42,0	1/1:16,0:15:11.85:82,12,0	1/1:17,0:18:22.74:167,23,0	1/1:22,0:20:17.78:121,18,0	1/1:9,9:17:23.92:283,24,0	1/1:5,17:22:39.05:485,39,0	1/1:1,6:7:15.03:186,15,0	1/1:7,18:25:51.11:631,51,0	1/1:3,16:18:33.06:417,33,0	1/1:0,16:16:33.11:417,33,0	1/1:15,0:15:17.75:122,18,0	1/1:18,0:18:38.22:296,38,0	1/1:3,13:16:30.05:379,30,0	1/1:4,0:2:2.98:21,3,0
chr10	46261027	.	AAAAAAAAAAG	A	8543.96	PASS	AB=1.000;AC=30;AF=0.536;AN=56;BaseQRankSum=-1.223;DP=519;FS=17.177;HRun=0;HaplotypeScore=157.2562;InbreedingCoeff=0.4650;MQ=45.18;MQ0=28;MQRankSum=-10.334;QD=27.65;ReadPosRankSum=1.664;VQSLOD=3.6125;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:32:19.36:0,19,2054	1/1:2,3:5:3:88,3,0	0/0:25,0:3:2.90:0,3,16	0/0:21,0:3:2.55:0,3,148	1/1:6,11:16:24.06:754,24,0	0/0:20,0:20:45.15:0,45,1728	0/0:23,0:23:50.90:0,51,1593	0/0:25,0:24:45.25:0,45,1201	0/0:12,0:12:30.10:0,30,751	1/1:4,11:14:42.14:1109,42,0	1/1:5,12:17:17.18:459,17,0	0/1:20,0:20:10.80:11,0,574	0/1:21,0:18:99:113,0,560	1/1:3,23:25:45.15:1307,45,0	1/1:1,26:26:42.14:1233,42,0	1/1:3,12:14:12.01:352,12,0	1/1:4,14:18:23.37:574,23,0	1/1:3,17:19:8.09:533,8,0	0/0:17,0:15:23.57:0,24,493	0/1:21,0:21:60.91:61,0,876	0/1:6,0:6:19.15:19,0,274	0/1:24,0:24:99:137,0,823	0/1:21,0:20:10.81:11,0,937	0/0:17,0:17:33.04:0,33,778	1/1:2,13:15:17.86:528,18,0	1/1:1,16:17:44.76:1166,45,0	0/0:17,0:17:18.05:0,18,865	1/1:2,2:2:3.01:88,3,0
chr10	46261952	.	A	AT	1997.64	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-9.793;DP=751;FS=0.545;HRun=1;HaplotypeScore=76.0473;InbreedingCoeff=0.9977;MQ=73.21;MQ0=0;MQRankSum=0.995;QD=40.77;ReadPosRankSum=-4.851;VQSLOD=2.1822;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,114,1399	0/0:9,0:9:24.08:0,24,312	0/0:16,0:16:45.10:0,45,563	0/0:24,0:24:60.76:0,61,731	0/0:19,0:19:57.18:0,57,737	0/0:22,0:22:57.13:0,57,694	0/0:28,0:28:78.22:0,78,982	1/1:4,45:49:99:2093,144,0	0/0:23,0:23:66.20:0,66,843	0/0:21,0:21:63.19:0,63,804	0/0:21,0:21:48.14:0,48,609	0/0:29,0:29:84.26:0,84,1076	0/0:33,0:33:96.30:0,96,1230	0/0:20,0:20:60.20:0,60,779	0/0:26,0:26:78.24:0,78,998	0/0:22,0:22:66.21:0,66,856	0/0:41,0:41:99:0,117,1502	0/0:21,0:21:57.18:0,57,737	0/0:31,0:31:93.30:0,93,1202	0/0:24,0:24:66.20:0,66,842	0/0:70,0:70:99:0,208,2671	0/0:20,0:20:60.19:0,60,777	0/0:16,0:16:45.15:0,45,583	0/0:41,0:41:99:0,114,1465	0/0:21,0:21:63.20:0,63,817	0/0:27,0:27:81.26:0,81,1051	0/0:26,0:24:75.24:0,75,972	0/0:11,0:11:33.08:0,33,411
chr10	46262226	.	TTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	T	6615.66	PASS	AB=1.000;AC=22;AF=0.393;AN=56;BaseQRankSum=9.080;DP=644;FS=1.417;HRun=0;HaplotypeScore=400.3120;InbreedingCoeff=0.7900;MQ=60.87;MQ0=36;MQRankSum=-4.774;QD=23.05;ReadPosRankSum=3.581;VQSLOD=2.1021;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:19,7:26:9.02:670,9,0	0/0:7,0:7:9.03:0,9,601	0/1:67,0:28:7.59:8,0,791	0/0:65,0:25:18.03:0,18,481	0/0:16,0:16:24.08:0,24,2339	0/0:11,0:14:20.66:0,21,1608	0/0:26,0:28:47.26:0,47,3418	0/0:29,0:27:45.15:0,45,2227	1/1:11,11:21:27.09:2020,27,0	0/0:27,0:26:48.16:0,48,3088	0/0:9,0:9:21.07:0,21,1349	1/1:11,4:15:9.03:679,9,0	1/1:13,5:17:9.03:669,9,0	0/0:17,0:16:31.87:0,32,2390	0/0:19,0:24:45.01:0,45,2618	0/0:18,0:19:24.97:0,25,2043	0/0:28,0:30:66.20:0,66,4935	0/0:19,0:21:33.11:0,33,2342	1/1:14,5:18:15.01:579,15,0	1/1:16,6:22:12.03:548,12,0	0/1:30,0:29:0:0,0,0	1/1:13,2:15:3:113,3,0	1/1:10,2:12:3.01:113,3,0	1/1:16,7:23:12.04:652,12,0	0/0:20,0:19:26.87:0,27,2171	0/0:24,0:23:36.10:0,36,2808	1/1:11,6:16:9.03:564,9,0	0/0:6,0:5:7.58:0,8,506
chr10	46263628	.	TG	T	3095.38	PASS	AB=0.993;AC=22;AF=0.393;AN=56;BaseQRankSum=0.878;DP=668;FS=4.600;HRun=2;HaplotypeScore=102.6258;InbreedingCoeff=0.2326;MQ=74.12;MQ0=0;MQRankSum=-0.548;QD=8.41;ReadPosRankSum=0.527;VQSLOD=1.1347;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:29:61.49:75,0,61	0/0:5,0:5:14.71:0,15,89	0/0:9,0:9:18.25:0,18,276	0/0:19,0:18:7.46:0,7,357	1/1:28,0:28:11.04:28,11,0	0/0:21,0:21:63.18:0,63,881	0/0:36,0:36:99:0,108,1478	0/0:47,0:47:99:0,128,1773	0/1:26,1:27:85.21:99,0,85	0/0:28,0:28:6.43:0,6,101	0/1:16,0:16:5.93:6,0,106	0/1:27,1:28:43.57:44,0,86	0/0:24,0:24:47.80:0,48,146	0/1:28,0:28:10.15:10,0,77	0/0:33,0:33:91.21:0,91,558	0/0:28,0:28:16.59:0,17,149	0/0:31,0:31:14.98:0,15,194	0/1:26,0:26:0.38:0,0,38	1/1:1,27:28:84.15:951,84,0	1/1:1,17:18:47.90:617,48,0	1/1:0,15:15:33.11:426,33,0	0/1:21,0:21:28.07:28,0,36	0/1:16,0:16:14.30:14,0,61	0/1:23,0:23:25.43:25,0,50	0/0:19,0:19:8.72:0,9,58	0/1:29,0:29:20.15:20,0,53	1/1:0,27:27:72.23:928,72,0	1/1:9,0:9:3.13:7,3,0
chr10	46263630	.	GT	G	6155.86	PASS	AB=0.861;AC=34;AF=0.607;AN=56;BaseQRankSum=1.297;DP=669;FS=1.727;HRun=10;HaplotypeScore=92.9496;InbreedingCoeff=0.8443;MQ=73.86;MQ0=0;MQRankSum=-0.000;QD=15.62;ReadPosRankSum=3.786;VQSLOD=5.3138;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:64.82:0,65,731	1/1:0,0:5:10.19:30,10,0	0/1:7,1:8:10.99:11,0,101	0/1:16,4:19:81.65:82,0,245	1/1:0,27:27:71.92:618,72,0	0/0:22,0:22:57.05:0,57,613	0/0:37,0:37:96.19:0,96,1030	0/0:45,2:47:71.25:0,71,1174	0/0:26,0:26:52.27:0,52,670	1/1:4,23:27:45.12:572,45,0	1/1:5,11:16:26.96:234,27,0	0/0:28,0:28:65.95:0,66,781	0/0:25,0:25:72.18:0,72,784	1/1:3,24:27:65.96:573,66,0	1/1:2,0:33:59.07:174,59,0	1/1:5,22:27:62.57:547,63,0	1/1:8,22:31:62.01:527,62,0	1/1:2,25:27:71.95:620,72,0	1/1:28,0:28:50.86:215,51,0	1/1:18,0:18:11.48:152,11,0	1/1:15,0:15:30.90:144,31,0	0/0:21,0:21:53.54:0,54,523	0/0:16,0:16:42.09:0,42,453	0/0:22,0:22:65.56:0,66,629	1/1:3,16:19:50.96:437,51,0	1/1:2,28:30:83.35:686,83,0	1/1:27,0:26:67.77:326,68,0	1/1:0,9:9:24:208,24,0
chr10	46265456	.	TAAAAGGAGGAGGGGG	T	17050.48	PASS	AB=0.582;AC=45;AF=0.804;AN=56;BaseQRankSum=5.471;DP=656;FS=4.071;HRun=0;HaplotypeScore=231.8795;InbreedingCoeff=0.8011;MQ=74.70;MQ0=2;MQRankSum=-5.666;QD=33.70;ReadPosRankSum=8.063;VQSLOD=3.3780;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:8,19:27:6.02:239,6,0	1/1:6,6:12:15.05:375,15,0	0/0:42,0:37:47.45:0,47,505	0/0:52,0:36:38.31:0,38,497	1/1:4,12:16:21.07:563,21,0	0/0:12,0:12:21.07:0,21,868	0/0:25,0:25:51.17:0,51,1852	0/0:15,0:13:26.88:0,27,453	1/1:3,20:23:15.94:633,16,0	1/1:7,24:31:69.22:1691,69,0	1/1:9,15:24:32.98:998,33,0	0/1:11,28:39:15.13:985,0,15	1/1:9,22:31:23.57:1009,24,0	1/1:4,17:21:18.06:747,18,0	1/1:6,27:33:33.11:1391,33,0	1/1:4,29:33:36.12:1518,36,0	1/1:8,21:28:6.91:255,7,0	1/1:8,0:8:15.05:289,15,0	1/1:4,10:14:29.98:530,30,0	1/1:7,15:22:36.12:854,36,0	1/1:8,0:8:12:141,12,0	1/1:5,21:26:30.06:901,30,0	1/1:9,12:21:14.56:511,15,0	1/1:5,8:13:9.03:294,9,0	1/1:3,9:12:12.04:416,12,0	1/1:6,24:30:72.24:1573,72,0	1/1:5,19:24:17.66:758,18,0	1/1:3,6:9:9.03:380,9,0
chr10	46265471	.	G	GA	2820.79	PASS	AB=0.972;AC=34;AF=0.607;AN=56;BaseQRankSum=-0.818;DP=655;FS=2.750;HRun=4;HaplotypeScore=163.5155;InbreedingCoeff=0.4703;MQ=76.76;MQ0=7;MQRankSum=3.320;QD=7.52;ReadPosRankSum=1.651;VQSLOD=0.4071;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:23:3.47:26,3,0	1/1:7,0:7:11.12:135,11,0	0/0:67,0:44:22.03:0,22,595	0/0:81,0:46:14.66:0,15,445	1/1:15,0:15:15.28:190,15,0	0/0:13,0:13:30.07:0,30,329	0/0:27,0:27:60.10:0,60,654	0/1:32,3:33:55.55:56,0,548	0/1:20,0:20:3.07:14,0,3	1/1:25,0:26:35.45:592,35,0	1/1:20,0:20:5.14:131,5,0	0/0:29,0:29:9.94:0,10,27	1/1:25,0:25:2.77:26,3,0	0/1:18,0:18:3.86:18,0,4	0/1:30,0:30:6.89:7,0,9	0/0:30,0:30:9.96:0,10,27	0/0:25,0:25:1.04:0,1,3	1/1:7,4:11:16.62:193,17,0	1/1:11,0:11:10.37:157,10,0	1/1:18,0:18:17.96:306,18,0	1/1:9,4:13:17.91:179,18,0	1/1:22,0:22:3.63:130,4,0	1/1:12,0:13:8.46:87,8,0	1/1:11,0:11:0.40:37,0,0	0/1:9,0:10:1.01:32,0,1	1/1:27,0:27:42.71:676,43,0	0/1:20,0:20:0.39:0,0,2	0/0:6,0:6:0.84:0,1,3
chr10	46266869	.	G	GA	7752.31	PASS	AB=0.643;AC=34;AF=0.607;AN=56;BaseQRankSum=12.277;DP=616;FS=8.356;HRun=7;HaplotypeScore=93.0082;InbreedingCoeff=0.8958;MQ=65.52;MQ0=4;MQRankSum=1.448;QD=20.14;ReadPosRankSum=2.156;VQSLOD=4.0596;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,20:24:56.67:661,57,0	1/1:0,6:6:15.04:179,15,0	0/0:27,0:19:32.82:0,33,316	0/0:21,0:11:14.65:0,15,156	1/1:5,18:24:53.73:573,54,0	0/0:20,0:20:60.15:0,60,644	0/0:23,0:23:57.14:0,57,612	0/0:24,0:24:57.14:0,57,608	0/0:18,0:18:39.66:0,40,207	1/1:12,6:18:35.52:369,36,0	1/1:4,14:19:43.52:430,44,0	1/1:4,19:23:26.30:459,26,0	1/1:5,22:26:27:451,27,0	0/1:3,12:13:0.36:261,0,0	1/1:5,18:23:21.89:365,22,0	1/1:7,12:19:28.47:516,28,0	1/1:10,31:42:21.09:749,21,0	0/1:12,6:19:4.49:292,0,4	0/0:21,0:21:63.15:0,63,670	0/0:21,0:21:54.13:0,54,579	0/0:28,0:28:78.20:0,78,836	1/1:3,16:19:34.12:350,34,0	1/1:3,19:22:42.13:509,42,0	1/1:4,14:19:23.79:378,24,0	1/1:4,21:26:42.02:472,42,0	1/1:11,14:23:41.90:573,42,0	0/0:27,0:27:81.20:0,81,868	1/1:3,6:10:15.41:163,15,0
chr10	46267445	.	CCT	C	1087.07	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.105;DP=632;FS=18.147;HRun=0;HaplotypeScore=72.0553;InbreedingCoeff=0.9966;MQ=89.91;MQ0=0;MQRankSum=-0.464;QD=31.06;ReadPosRankSum=-4.654;VQSLOD=2.0478;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:96.33:0,96,1674	0/0:12,0:11:30.10:0,30,510	0/0:31,0:31:81.27:0,81,1318	0/0:32,0:32:78.22:0,78,1283	0/0:14,0:14:39.13:0,39,683	0/0:28,0:28:84.27:0,84,1443	0/0:14,0:14:39.10:0,39,628	1/1:4,31:35:93.25:1182,93,0	0/0:21,0:21:60.21:0,60,1047	0/0:26,0:26:75.26:0,75,1315	0/0:13,0:13:30.10:0,30,517	0/0:13,0:13:39.13:0,39,684	0/0:17,0:17:45.15:0,45,778	0/0:9,0:9:24.08:0,24,421	0/0:26,0:26:78.27:0,78,1366	0/0:16,0:16:48.15:0,48,810	0/0:24,0:24:72.20:0,72,1203	0/0:22,0:22:60.16:0,60,1008	0/0:26,0:26:72.25:0,72,1248	0/0:18,0:18:42.14:0,42,715	0/0:48,0:48:99:0,126,2171	0/0:14,0:14:36.11:0,36,603	0/0:21,0:21:51.16:0,51,866	0/0:25,0:25:66.20:0,66,1127	0/0:21,0:21:57.20:0,57,992	0/0:17,0:17:48.16:0,48,835	0/0:29,0:28:81.28:0,81,1408	0/0:25,0:25:66.23:0,66,1157
chr10	46268168	.	G	GGA	591.27	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=-3.562;DP=737;FS=4.238;HRun=0;HaplotypeScore=96.5697;InbreedingCoeff=0.6964;MQ=65.24;MQ0=6;MQRankSum=-0.763;QD=6.57;ReadPosRankSum=-4.610;VQSLOD=1.9417;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:29:60.24:0,60,701	0/0:10,0:10:24.08:0,24,295	0/0:50,0:26:44.52:0,45,518	0/1:57,0:28:5.64:6,0,195	0/0:24,0:24:51.12:0,51,590	0/0:26,1:28:17.11:0,17,703	0/0:16,0:16:36.09:0,36,430	1/1:15,18:30:46.96:685,47,0	0/0:25,0:25:63.18:0,63,764	0/0:25,0:27:56.99:0,57,659	0/0:14,0:15:35.93:0,36,405	0/0:26,0:28:68.86:0,69,780	0/0:26,0:26:69.20:0,69,835	0/0:26,0:26:51.16:0,51,628	0/0:28,0:28:72.22:0,72,875	0/0:21,0:21:57.18:0,57,701	0/0:24,0:26:62.70:0,63,725	0/0:21,0:21:48.12:0,48,575	0/0:14,0:14:30.09:0,30,367	0/0:29,0:29:53.45:0,53,708	0/0:17,0:18:41.96:0,42,492	0/0:25,0:27:62.98:0,63,740	0/0:26,0:27:75.07:0,75,899	0/0:28,0:31:77.83:0,78,896	0/0:31,0:31:81.24:0,81,981	0/0:27,0:27:54.16:0,54,652	0/0:27,0:26:63.20:0,63,775	0/0:16,0:16:42.13:0,42,515
chr10	46268237	.	CCATA	C	1957.68	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=9.310;DP=679;FS=3.947;HRun=0;HaplotypeScore=111.1948;InbreedingCoeff=0.9988;MQ=83.42;MQ0=0;MQRankSum=-6.678;QD=44.49;ReadPosRankSum=-3.725;VQSLOD=3.3643;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:90.29:0,90,2370	0/0:13,0:13:39.13:0,39,1052	0/0:22,0:22:66.19:0,66,1491	0/0:18,0:18:54.19:0,54,1332	0/0:35,0:35:99:0,99,2672	0/0:24,0:24:72.23:0,72,1848	0/0:15,0:15:45.15:0,45,1215	1/1:6,38:44:99:2053,114,0	0/0:26,0:26:78.23:0,78,1998	0/0:31,0:31:93.32:0,93,2463	0/0:10,0:10:27.08:0,27,595	0/0:25,0:25:75.26:0,75,1915	0/0:24,0:24:69.24:0,69,1829	0/0:24,0:24:72.25:0,72,1934	0/0:37,0:37:99:0,108,2866	0/0:29,0:29:87.28:0,87,2260	0/0:27,0:27:78.27:0,78,2105	0/0:24,0:24:69.24:0,69,1810	0/0:18,0:18:54.19:0,54,1379	0/0:27,0:27:69.24:0,69,1823	0/0:25,0:25:72.25:0,72,1913	0/0:17,0:17:51.18:0,51,1360	0/0:19,0:19:57.20:0,57,1466	0/0:19,0:19:54.19:0,54,1372	0/0:22,0:22:66.23:0,66,1747	0/0:35,0:35:99:0,105,2812	0/0:24,0:24:66.21:0,66,1697	0/0:12,0:12:36.12:0,36,970
chr10	46269332	.	GGGGC	G	12026.75	PASS	AC=44;AF=0.815;AN=54;BaseQRankSum=-1.082;DP=375;FS=0.000;HRun=0;HaplotypeScore=82.0832;InbreedingCoeff=0.8729;MQ=60.18;MQ0=0;MQRankSum=-4.824;QD=35.58;ReadPosRankSum=3.718;VQSLOD=4.9563;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,23:30:60.21:1038,60,0	1/1:1,4:5:12.04:208,12,0	0/0:6,0:5:6.02:0,6,95	0/0:12,0:11:24.08:0,24,509	1/1:9,14:23:33.11:570,33,0	1/1:3,14:17:39.13:674,39,0	1/1:2,20:22:57.19:973,57,0	1/1:7,8:14:14.98:191,15,0	1/1:1,7:8:21.07:363,21,0	1/1:2,15:17:42.13:699,42,0	1/1:4,12:16:18.06:311,18,0	1/1:5,11:16:33.07:539,33,0	1/1:3,15:18:42.14:727,42,0	1/1:6,8:14:27.09:467,27,0	1/1:3,14:17:39.13:662,39,0	1/1:0,12:12:36.12:623,36,0	1/1:2,14:16:33.11:571,33,0	1/1:3,19:22:51.17:883,51,0	./.	0/0:2,0:2:3.01:0,3,63	0/0:8,0:8:6.02:0,6,151	1/1:3,8:11:21.07:363,21,0	1/1:2,11:13:30.10:506,30,0	1/1:3,5:8:15.05:260,15,0	1/1:1,10:11:24.08:415,24,0	1/1:6,15:21:42.14:726,42,0	0/0:7,0:7:12.04:0,12,264	1/1:1,5:6:15.05:259,15,0
chr10	46270056	.	AT	A	4218.90	PASS	AB=0.750;AC=25;AF=0.446;AN=56;BaseQRankSum=-4.789;DP=502;FS=0.750;HRun=11;HaplotypeScore=68.5094;InbreedingCoeff=0.8985;MQ=76.05;MQ0=0;MQRankSum=0.624;QD=18.67;ReadPosRankSum=5.038;VQSLOD=5.5937;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:57.13:0,57,600	1/1:2,8:10:17.97:148,18,0	0/0:17,0:16:28.15:0,28,262	0/0:9,0:9:14.96:0,15,131	1/1:7,18:26:38.91:421,39,0	0/0:4,0:20:39.93:0,40,206	0/0:6,0:23:51.42:0,51,267	0/0:7,0:37:86.17:0,86,484	0/0:10,0:10:30.07:0,30,314	1/1:2,16:18:47.91:390,48,0	1/1:1,14:16:34.97:277,35,0	0/0:12,1:13:11.44:0,11,321	0/0:20,1:21:29.49:0,29,519	1/1:2,7:9:20.97:171,21,0	1/1:4,21:25:59.66:480,60,0	1/1:1,11:12:3.97:239,4,0	1/1:3,27:30:74.03:614,74,0	1/1:4,21:28:66.03:510,66,0	0/0:3,0:17:40.12:0,40,212	0/0:1,0:21:54.54:0,55,300	0/0:1,0:8:14.24:0,14,71	0/0:17,1:18:17.51:0,18,391	0/1:4,2:6:9.62:10,0,107	0/0:14,1:15:14.45:0,14,359	1/1:2,13:15:35.96:296,36,0	1/1:3,16:19:47.91:393,48,0	0/0:7,0:23:45.84:0,46,263	1/1:1,11:12:32.96:271,33,0
chr10	46271381	.	AAAAAC	A	11543.74	PASS	AB=0.652;AC=37;AF=0.661;AN=56;BaseQRankSum=13.541;DP=578;FS=1.354;HRun=0;HaplotypeScore=124.2945;InbreedingCoeff=0.9277;MQ=54.59;MQ0=3;MQRankSum=-11.630;QD=29.91;ReadPosRankSum=2.293;VQSLOD=4.8962;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,13:23:27.09:504,27,0	1/1:3,4:7:9.03:161,9,0	0/0:19,0:14:21.07:0,21,375	0/0:19,0:10:20.31:0,20,276	1/1:9,20:29:60.16:1040,60,0	0/0:22,0:22:51.17:0,51,1300	0/0:12,0:12:21.07:0,21,552	0/0:25,0:25:42.14:0,42,947	1/1:3,17:20:30.10:560,30,0	1/1:6,18:24:60.17:1039,60,0	1/1:12,22:34:57.13:1000,57,0	1/1:8,10:18:21.07:391,21,0	1/1:4,15:19:30.10:565,30,0	1/1:5,21:26:42.14:778,42,0	1/1:6,18:24:42.14:782,42,0	1/1:4,16:20:30.08:560,30,0	1/1:7,15:22:21.07:395,21,0	0/1:7,8:15:2.81:260,0,3	0/0:24,0:23:48.12:0,48,1120	0/0:22,0:22:45.15:0,45,1153	0/0:17,0:17:42.14:0,42,1114	1/1:2,16:18:42.14:775,42,0	1/1:4,15:19:26.79:508,27,0	1/1:4,9:13:12.04:221,12,0	1/1:4,21:25:42.14:790,42,0	1/1:1,17:18:51.17:932,51,0	0/0:32,0:32:69.24:0,69,1934	1/1:4,8:12:15.05:282,15,0
chr10	46272901	.	C	CTTTT	9230.67	PASS	AB=0.675;AC=39;AF=0.696;AN=56;BaseQRankSum=5.887;DP=573;FS=0.402;HRun=11;HaplotypeScore=125.8110;InbreedingCoeff=0.8757;MQ=63.50;MQ0=3;MQRankSum=-5.251;QD=23.13;ReadPosRankSum=-3.425;VQSLOD=2.4045;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,20:31:42.10:817,42,0	1/1:3,0:11:17.27:195,17,0	0/0:16,0:13:13.56:0,14,201	0/0:9,0:10:7.86:0,8,174	1/1:8,21:29:47.31:685,47,0	0/0:23,0:23:55.24:0,55,708	0/0:24,0:25:52.30:0,52,641	0/1:14,0:27:18.04:18,0,18	1/1:2,7:10:12.04:248,12,0	1/1:7,17:27:53.45:683,53,0	1/1:12,12:23:43.22:670,43,0	1/1:3,11:15:18.06:328,18,0	1/1:3,11:15:15.52:331,16,0	1/1:13,1:13:26.89:316,27,0	1/1:7,1:26:41.78:420,42,0	1/1:10,13:24:36.12:696,36,0	1/1:8,15:23:24.08:493,24,0	1/1:8,2:11:9.13:225,9,0	0/0:27,0:27:15.15:0,15,593	0/0:34,0:34:63.33:0,63,1021	0/0:8,0:10:22.29:0,22,275	1/1:11,2:13:24.04:319,24,0	1/1:7,15:26:31.64:562,32,0	1/1:5,10:15:33.11:673,33,0	1/1:6,14:20:14.95:206,15,0	1/1:9,16:26:67.80:1008,68,0	0/0:26,0:26:54.41:0,54,716	1/1:3,6:9:18.02:337,18,0
chr10	46273326	.	G	GCTCGCTGCCGCAGAG	17911.12	PASS	AB=0.750;AC=53;AF=0.981;AN=54;BaseQRankSum=0.069;DP=205;FS=13.153;HRun=0;HaplotypeScore=210.3154;InbreedingCoeff=-0.0799;MQ=59.93;MQ0=0;MQRankSum=-1.566;QD=87.37;ReadPosRankSum=1.150;VQSLOD=3.1274;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:20:44.82:2330,45,0	1/1:3,0:3:3.01:190,3,0	1/1:0,1:2:6.02:391,6,0	0/1:4,0:6:15.42:503,0,15	1/1:3,0:3:6.01:200,6,0	1/1:11,0:11:12.04:602,12,0	1/1:14,0:14:36.11:1834,36,0	1/1:8,0:8:21.07:1133,21,0	1/1:11,0:11:3.01:190,3,0	1/1:5,0:5:15.05:586,15,0	./.	1/1:13,0:13:27.05:1212,27,0	1/1:8,0:8:9.03:501,9,0	1/1:7,0:7:12.04:710,12,0	1/1:11,0:11:24.07:1138,24,0	1/1:11,0:11:15.04:646,15,0	1/1:9,0:9:12.04:726,12,0	1/1:4,0:4:6.02:402,6,0	1/1:6,0:6:15.04:430,15,0	1/1:4,0:4:3.01:50,3,0	1/1:9,0:9:12.93:491,13,0	1/1:4,0:4:3.01:123,3,0	1/1:6,0:6:9.03:338,9,0	1/1:6,0:6:3.01:201,3,0	1/1:6,0:6:12.04:739,12,0	1/1:8,0:8:23.67:1084,24,0	1/1:4,0:4:9.03:444,9,0	1/1:6,0:6:15.05:716,15,0
chr10	46275622	.	CTTCTCTTTTT	C	432.40	PASS	AC=26;AF=0.542;AN=48;BaseQRankSum=1.460;DP=376;FS=4.026;HRun=0;HaplotypeScore=110.5886;InbreedingCoeff=0.7315;MQ=72.54;MQ0=4;MQRankSum=1.079;QD=2.86;ReadPosRankSum=-5.696;VQSLOD=0.4577;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:48.16:0,48,2496	1/1:10,0:10:3:25,3,0	0/0:25,0:18:42.66:0,43,1215	0/0:21,0:14:29.46:0,29,974	./.	0/0:14,0:13:36.12:0,36,1814	0/0:18,0:18:51.16:0,51,2409	1/1:18,0:18:9.01:82,9,0	0/0:9,0:9:27.09:0,27,1220	1/1:19,0:19:9.02:92,9,0	./.	0/0:16,0:16:45.15:0,45,1821	0/0:10,0:10:27.09:0,27,992	1/1:12,0:12:5.99:50,6,0	1/1:13,0:13:8.99:74,9,0	1/1:12,0:12:5.99:50,6,0	1/1:8,0:8:0.47:1,0,0	1/1:8,0:8:3:29,3,0	1/1:5,0:5:3:27,3,0	1/1:15,0:15:11.98:99,12,0	1/1:3,0:3:2.99:24,3,0	0/0:12,0:12:11.11:0,11,1439	0/0:20,0:20:54.19:0,54,2355	0/0:16,0:16:36.12:0,36,1598	1/1:16,0:16:3:26,3,0	1/1:12,0:12:3:27,3,0	./.	./.
chr10	46276364	.	G	GT	2757.12	PASS	AB=0.892;AC=31;AF=0.554;AN=56;BaseQRankSum=-5.162;DP=687;FS=19.122;HRun=15;HaplotypeScore=86.4590;InbreedingCoeff=0.2989;MQ=74.38;MQ0=3;MQRankSum=-1.785;QD=5.63;ReadPosRankSum=0.502;VQSLOD=0.8430;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,20:23:12.33:218,12,0	1/1:2,5:7:5.95:44,6,0	0/1:32,0:21:0.77:14,0,1	0/1:31,0:19:5.68:6,0,53	0/1:20,1:25:14.80:15,0,111	0/0:23,3:27:16.34:0,16,202	0/0:24,4:28:14.18:0,14,181	0/1:44,2:49:8.79:9,0,250	1/1:7,9:17:12.97:193,13,0	0/0:26,2:33:10.48:0,10,200	0/1:23,2:26:4.06:4,0,163	0/1:11,21:32:7.77:200,0,8	1/1:14,8:22:35.91:368,36,0	0/0:12,0:14:7.48:0,7,40	1/1:5,16:23:20.62:260,21,0	0/0:27,1:33:25.38:0,25,298	0/0:20,1:23:8.05:0,8,146	0/1:20,1:24:15.56:16,0,107	1/1:11,14:27:0.11:283,0,0	1/1:8,16:25:12.14:289,12,0	1/1:4,16:20:7.39:160,7,0	0/1:8,9:18:17.33:82,0,17	1/1:7,14:23:6.09:245,6,0	1/1:7,6:16:17.46:219,17,0	0/0:22,0:26:25.10:0,25,148	0/1:16,1:18:25.79:26,0,69	1/1:12,19:31:9.50:291,9,0	0/0:11,0:12:4.08:0,4,72
chr10	46278154	.	G	GA	5045.75	PASS	AB=0.862;AC=53;AF=0.946;AN=56;BaseQRankSum=-6.500;DP=655;FS=202.391;HRun=2;HaplotypeScore=160.2805;InbreedingCoeff=0.5794;MQ=79.31;MQ0=0;MQRankSum=4.965;QD=7.91;ReadPosRankSum=0.427;VQSLOD=0.6720;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:32,0:32:29.08:186,29,0	1/1:6,0:6:6.07:27,6,0	0/1:21,4:25:23.62:24,0,412	0/0:17,0:17:50.91:0,51,438	1/1:20,0:20:18.46:110,18,0	1/1:13,0:13:20.10:118,20,0	1/1:27,0:27:35.67:214,36,0	1/1:33,0:33:87.32:511,87,0	1/1:27,0:27:25.94:146,26,0	1/1:19,0:19:42.95:261,43,0	1/1:22,0:22:19.74:135,20,0	1/1:27,0:27:36.92:206,37,0	1/1:19,0:19:17.59:102,18,0	1/1:30,0:30:23.93:165,24,0	1/1:45,0:45:73.05:407,73,0	1/1:32,0:32:47.15:260,47,0	1/1:23,0:23:44.42:200,44,0	1/1:17,0:17:27.21:102,27,0	1/1:25,1:26:49.44:337,49,0	1/1:28,0:28:49.29:238,49,0	1/1:24,0:24:39.28:203,39,0	1/1:25,0:25:32.36:186,32,0	1/1:31,0:31:27.34:153,27,0	1/1:12,0:12:12.98:68,13,0	1/1:20,0:20:35.85:173,36,0	1/1:22,0:22:55.31:276,55,0	1/1:22,0:22:22.80:138,23,0	1/1:11,0:11:22.46:98,22,0
chr10	46279632	.	TC	T	6272.67	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=10.107;DP=573;FS=0.000;HRun=6;HaplotypeScore=59.2862;InbreedingCoeff=0.9966;MQ=75.48;MQ0=0;MQRankSum=-1.253;QD=26.58;ReadPosRankSum=4.987;VQSLOD=4.9545;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,123,1577	1/1:1,6:7:18.05:193,18,0	0/0:14,0:14:36.09:0,36,436	0/0:10,0:10:19.43:0,19,224	1/1:0,18:18:51.09:535,51,0	0/0:21,0:21:63.19:0,63,813	0/0:15,0:15:36.12:0,36,474	0/0:30,0:30:75.17:0,75,924	0/0:18,0:18:51.17:0,51,668	1/1:1,13:14:39.10:418,39,0	1/1:2,11:13:33.08:355,33,0	0/0:21,0:21:63.18:0,63,799	0/0:15,0:15:45.13:0,45,568	1/1:3,20:23:60.15:645,60,0	1/1:2,16:18:42.10:451,42,0	1/1:0,28:28:75.18:806,75,0	1/1:2,35:37:84.21:903,84,0	1/1:1,18:19:33.08:355,33,0	0/0:11,0:11:27.08:0,27,335	0/0:18,0:18:39.12:0,39,498	0/0:37,0:37:99:0,108,1389	0/0:28,0:28:69.14:0,69,885	0/0:12,0:12:33.09:0,33,410	0/0:23,0:23:66.21:0,66,867	1/1:0,22:22:57.14:612,57,0	1/1:1,26:27:75.19:806,75,0	0/0:23,0:23:66.21:0,66,868	1/1:3,7:10:18.04:193,18,0
chr10	46280336	.	GT	G	17199.64	PASS	AC=54;AF=1.000;AN=54;DP=439;FS=0.000;HRun=2;HaplotypeScore=365.7981;InbreedingCoeff=0.0886;MQ=33.59;MQ0=0;QD=39.27;VQSLOD=3.1052;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,25:25:63.21:868,63,0	1/1:1,13:14:40.38:548,40,0	1/1:1,0:1:2.80:13,3,0	./.	1/1:0,27:27:57.19:784,57,0	1/1:0,24:24:72.24:1005,72,0	1/1:0,14:14:39.13:537,39,0	1/1:0,15:15:45.15:628,45,0	1/1:0,20:20:60.20:835,60,0	1/1:0,20:20:57.15:774,57,0	1/1:0,10:10:30.10:411,30,0	1/1:0,18:18:54.18:753,54,0	1/1:0,19:19:57.19:795,57,0	1/1:0,19:19:57.19:790,57,0	1/1:0,24:24:72.24:1004,72,0	1/1:0,18:18:51.17:712,51,0	1/1:0,3:3:9.03:126,9,0	1/1:0,9:9:27.09:377,27,0	1/1:0,15:15:45.15:629,45,0	1/1:0,26:26:78.26:1066,78,0	1/1:0,6:6:9.03:126,9,0	1/1:0,17:17:51.14:688,51,0	1/1:0,14:14:39.13:537,39,0	1/1:0,13:13:29.89:418,30,0	1/1:0,17:17:51.17:689,51,0	1/1:0,18:18:54.18:754,54,0	1/1:0,21:21:63.21:874,63,0	1/1:0,11:11:33.11:460,33,0
chr10	46280346	.	AG	A	15738.96	PASS	AC=54;AF=1.000;AN=54;BaseQRankSum=0.723;DP=445;FS=0.000;HRun=2;HaplotypeScore=377.3145;InbreedingCoeff=-0.0123;MQ=37.56;MQ0=0;MQRankSum=-1.732;QD=35.45;ReadPosRankSum=1.656;VQSLOD=2.9375;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,22:24:63.20:810,63,0	1/1:1,14:15:39.08:478,39,0	1/1:1,2:3:0.37:56,0,0	./.	1/1:0,26:26:69.22:889,69,0	1/1:2,20:22:60.19:776,60,0	1/1:2,13:15:39.06:483,39,0	1/1:1,15:16:45.15:581,45,0	1/1:0,21:21:63.20:810,63,0	1/1:1,19:20:54.18:698,54,0	1/1:0,11:11:33.11:426,33,0	1/1:0,15:15:45.15:581,45,0	1/1:1,17:18:48.16:619,48,0	1/1:0,20:20:60.19:771,60,0	1/1:2,24:26:72.23:926,72,0	1/1:0,18:18:54.13:679,54,0	1/1:0,4:4:9.03:116,9,0	1/1:1,9:10:27.09:350,27,0	1/1:0,14:14:42.14:544,42,0	1/1:1,24:25:72.23:930,72,0	1/1:1,4:5:12.04:151,12,0	1/1:2,14:16:42.13:535,42,0	1/1:1,14:15:39.07:471,39,0	1/1:2,11:13:27.09:343,27,0	1/1:0,20:20:60.11:737,60,0	1/1:0,19:19:57.19:738,57,0	1/1:0,23:23:69.22:892,69,0	1/1:0,10:10:27.09:349,27,0
chr10	46280352	.	GC	G	14099.85	PASS	AC=54;AF=1.000;AN=54;DP=438;FS=0.000;HRun=3;HaplotypeScore=391.7171;InbreedingCoeff=-0.0057;MQ=41.36;MQ0=0;QD=32.19;VQSLOD=2.2533;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,21:24:60.18:719,60,0	1/1:2,12:14:36.11:437,36,0	1/1:1,5:6:15.05:185,15,0	./.	1/1:0,26:26:69.21:837,69,0	1/1:1,19:20:57.17:688,57,0	1/1:0,16:16:45.13:532,45,0	1/1:4,13:17:39.12:482,39,0	1/1:0,20:20:60.19:735,60,0	1/1:0,19:19:54.17:667,54,0	1/1:0,11:11:33.10:390,33,0	1/1:1,14:15:42.13:517,42,0	1/1:3,14:17:42.13:516,42,0	1/1:2,18:20:54.17:664,54,0	1/1:1,23:24:69.21:841,69,0	1/1:3,15:18:45.14:555,45,0	1/1:0,5:5:12.04:144,12,0	1/1:2,7:9:21.06:260,21,0	1/1:2,13:15:39.12:482,39,0	1/1:1,24:25:72.22:875,72,0	1/1:2,2:4:6.02:74,6,0	1/1:3,11:14:30.08:369,30,0	1/1:2,13:15:36.11:437,36,0	1/1:1,11:12:27.08:328,27,0	1/1:0,20:20:60.19:739,60,0	1/1:2,17:19:51.16:630,51,0	1/1:4,19:23:57.18:703,57,0	1/1:1,9:10:24.07:293,24,0
chr10	46280792	.	C	CCCATGCAGCAGGCA	6478	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=2.806;DP=793;FS=8.854;HRun=0;HaplotypeScore=308.7953;InbreedingCoeff=0.7295;MQ=65.40;MQ0=0;MQRankSum=-6.428;QD=22.26;ReadPosRankSum=-1.336;VQSLOD=2.2343;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,105,2685	0/1:16,0:16:87.18:87,0,449	0/0:20,0:19:8.72:0,9,219	0/0:15,0:15:17.17:0,17,198	0/1:13,0:13:1.79:40,0,2	0/0:28,0:28:64.89:0,65,1370	0/0:37,0:37:93.21:0,93,2226	0/0:20,0:20:39.08:0,39,479	0/0:24,0:24:63.13:0,63,1252	1/1:26,0:26:75.15:995,75,0	1/1:6,0:6:11.93:92,12,0	0/0:47,0:47:99:0,108,2855	0/0:35,0:35:93.11:0,93,2046	1/1:3,30:38:6.02:409,6,0	0/1:36,0:36:99:387,0,990	1/1:3,32:40:3.09:404,3,0	1/1:22,0:22:53.94:914,54,0	1/1:27,0:27:68.98:1519,69,0	0/0:18,0:17:26.98:0,27,469	0/0:17,0:17:31.84:0,32,846	0/0:88,0:88:99:0,234,5288	0/0:18,0:18:45.08:0,45,1029	0/0:17,0:17:39.06:0,39,963	0/0:51,0:51:99:0,123,2713	1/1:16,0:16:27.04:328,27,0	1/1:31,0:31:67.48:894,67,0	0/0:26,0:26:66.08:0,66,1118	1/1:4,14:20:6.02:409,6,0
chr10	46280818	.	GC	G	2520.81	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=3.129;DP=783;FS=6.107;HRun=1;HaplotypeScore=111.8144;InbreedingCoeff=0.9810;MQ=75.79;MQ0=0;MQRankSum=-0.543;QD=36.53;ReadPosRankSum=-0.512;VQSLOD=2.9763;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,114,1797	0/0:17,0:17:51.14:0,51,749	0/0:27,0:27:64.89:0,65,1134	0/0:17,0:17:51.13:0,51,760	0/0:14,0:14:21.06:0,21,331	1/1:0,27:27:78.26:1090,78,0	1/1:0,42:42:99:1552,111,0	0/0:20,0:20:60.19:0,60,916	0/0:24,0:24:72.25:0,72,1151	0/0:28,0:28:81.04:0,81,1190	0/0:9,0:9:24.08:0,24,377	0/0:44,0:44:99:0,129,2037	0/0:35,0:35:99:0,105,1644	0/0:34,0:34:44.94:0,45,699	0/0:34,0:34:99:0,102,1607	0/0:29,0:29:30.10:0,30,464	0/0:28,0:28:68.72:0,69,1062	0/0:35,0:35:93.21:0,93,1472	0/0:23,0:23:66.20:0,66,1010	0/0:17,0:17:45.15:0,45,709	0/0:90,0:90:99:0,268,4171	0/0:18,0:18:51.17:0,51,815	0/0:15,0:15:45.15:0,45,719	0/0:45,0:45:99:0,129,1996	0/0:19,0:19:57.13:0,57,870	0/0:23,0:23:61.46:0,61,950	0/0:21,0:21:60.20:0,60,954	0/0:10,0:10:12.04:0,12,173
chr10	46281405	.	C	CTTTTT	10247.22	PASS	AB=0.894;AC=52;AF=0.929;AN=56;BaseQRankSum=1.823;DP=578;FS=24.280;HRun=16;HaplotypeScore=175.5218;InbreedingCoeff=0.3827;MQ=53.58;MQ0=7;MQRankSum=-4.422;QD=18.17;ReadPosRankSum=-3.967;VQSLOD=-0.1344;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:16,6:25:26.78:502,27,0	1/1:13,0:11:12.04:267,12,0	0/0:13,0:9:8.73:0,9,94	0/1:9,0:8:7.48:7,0,33	1/1:25,0:25:24.98:287,25,0	1/1:22,0:22:36.12:735,36,0	1/1:15,0:15:5.73:129,6,0	0/1:30,0:40:69.63:70,0,75	1/1:19,0:19:26.10:313,26,0	1/1:29,0:26:49:776,49,0	1/1:22,0:21:22.99:354,23,0	1/1:16,0:15:25.90:451,26,0	1/1:16,0:15:24.08:379,24,0	1/1:14,0:13:22.57:396,23,0	1/1:22,0:22:25.64:536,26,0	1/1:16,0:16:18.03:363,18,0	1/1:23,0:22:35.36:557,35,0	1/1:20,0:20:32.98:456,33,0	1/1:34,0:33:11.07:570,11,0	1/1:14,0:14:18.40:204,18,0	1/1:10,0:9:5.45:48,5,0	1/1:20,0:20:15.05:263,15,0	1/1:17,0:17:23.15:233,23,0	1/1:17,2:21:21.19:332,21,0	1/1:22,0:22:30.73:545,31,0	1/1:39,0:38:54.27:937,54,0	1/1:20,0:20:14.22:190,14,0	1/1:15,0:13:18.03:345,18,0
chr10	46282354	.	A	ACATT	20190.75	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-16.201;DP=776;FS=6.947;HRun=0;HaplotypeScore=123.1214;InbreedingCoeff=0.9994;MQ=89.91;MQ0=0;MQRankSum=-5.579;QD=67.53;ReadPosRankSum=3.363;VQSLOD=6.9148;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:96.30:0,96,1773	1/1:0,9:11:21.07:574,21,0	0/0:46,0:46:99:0,132,2423	0/0:34,0:34:90.02:0,90,1485	1/1:1,26:27:74.86:1917,75,0	0/0:17,0:17:51.17:0,51,945	0/0:23,0:23:69.19:0,69,1259	0/0:48,0:48:99:0,135,2326	0/0:24,0:24:72.25:0,72,1389	1/1:0,19:20:54.17:1421,54,0	1/1:4,19:27:66.06:1516,66,0	0/0:28,0:28:81.25:0,81,1503	0/0:28,0:28:81.28:0,81,1570	1/1:2,23:25:69.19:1823,69,0	1/1:1,30:35:84.29:2297,84,0	1/1:4,36:42:99:2780,102,0	1/1:2,22:24:60.12:1516,60,0	1/1:1,17:18:54.19:1478,54,0	0/0:29,0:29:87.25:0,87,1583	0/0:33,0:33:90.27:0,90,1639	0/0:40,0:40:99:0,120,2247	0/0:19,0:19:57.18:0,57,1069	0/0:23,0:23:69.18:0,69,1279	0/0:28,0:28:84.27:0,84,1563	1/1:1,22:23:63.17:1662,63,0	1/1:4,29:34:93.32:2385,93,0	0/0:23,0:23:63.22:0,63,1212	1/1:1,11:13:30.10:822,30,0
chr10	46282597	.	CT	C	7111.56	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=14.942;DP=737;FS=0.930;HRun=8;HaplotypeScore=68.4672;InbreedingCoeff=0.9975;MQ=72.23;MQ0=0;MQRankSum=-3.229;QD=23.86;ReadPosRankSum=3.243;VQSLOD=5.6614;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,123,1475	1/1:0,13:13:39.06:377,39,0	0/0:29,1:28:43.24:0,43,786	0/0:17,0:17:39.10:0,39,441	1/1:3,28:31:84.13:809,84,0	0/0:13,0:13:36.11:0,36,435	0/0:23,0:23:51.16:0,51,616	0/0:33,0:33:87.26:0,87,1041	0/0:40,0:40:99:0,108,1288	1/1:5,27:32:81.12:782,81,0	1/1:1,18:19:51.08:492,51,0	0/0:35,0:36:99:0,102,1210	0/0:26,0:26:78.23:0,78,933	1/1:5,22:27:66.10:637,66,0	1/1:5,21:26:51.08:493,51,0	1/1:4,16:20:14.83:427,15,0	1/1:1,37:38:90.14:869,90,0	1/1:3,21:24:39.22:529,39,0	0/0:29,0:29:75.22:0,75,895	0/0:24,0:24:57.14:0,57,673	0/0:26,0:26:75.23:0,75,906	0/0:21,0:21:63.19:0,63,761	0/0:12,0:13:38.97:0,39,438	0/0:27,0:27:75.23:0,75,906	1/1:4,23:27:66.10:637,66,0	1/1:1,29:30:84.11:799,84,0	0/0:34,0:34:96.26:0,96,1128	1/1:1,10:11:27.04:261,27,0
chr10	46283786	.	GT	G	17538.55	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=2.198;DP=800;FS=26.864;HRun=8;HaplotypeScore=85.1219;InbreedingCoeff=0.9981;MQ=63.47;MQ0=2;MQRankSum=-1.818;QD=24.70;ReadPosRankSum=8.514;VQSLOD=3.0203;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,59:61:99:1679,174,0	1/1:1,13:14:39.06:377,39,0	0/0:26,1:24:28.19:0,28,589	0/0:25,0:23:47.81:0,48,543	1/1:2,27:29:77.94:734,78,0	1/1:3,28:31:87.13:837,87,0	1/1:2,30:32:72.11:695,72,0	0/0:37,0:37:99:0,102,1196	1/1:2,22:24:57.09:550,57,0	1/1:4,22:26:66.10:637,66,0	1/1:1,12:12:23.69:221,24,0	1/1:2,27:29:81.13:782,81,0	1/1:2,22:24:63.10:608,63,0	1/1:4,26:30:78.12:753,78,0	1/1:1,32:33:90.14:869,90,0	1/1:4,28:32:72.11:695,72,0	1/1:0,37:37:99:985,102,0	1/1:5,31:36:87.14:840,87,0	1/1:5,19:16:38.97:366,39,0	1/1:0,15:15:36.04:348,36,0	1/1:3,41:44:99:1130,117,0	1/1:1,26:27:78.12:753,78,0	1/1:2,24:26:63.07:608,63,0	1/1:3,35:38:99:985,102,0	1/1:2,19:21:48.08:464,48,0	1/1:4,27:30:81.13:782,81,0	1/1:1,24:25:63.10:608,63,0	1/1:0,8:8:24.04:232,24,0
chr10	46287570	.	AT	A	7812.46	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=5.422;DP=664;FS=0.303;HRun=8;HaplotypeScore=75.1486;InbreedingCoeff=0.9993;MQ=80.69;MQ0=0;MQRankSum=-2.828;QD=25.04;ReadPosRankSum=3.999;VQSLOD=5.4578;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:63.16:0,63,736	1/1:1,11:12:33.05:319,33,0	0/0:28,0:26:53.62:0,54,614	0/0:14,0:12:21.72:0,22,266	1/1:6,33:39:93.14:898,93,0	0/0:24,0:24:69.20:0,69,820	0/0:25,0:25:60.18:0,60,725	0/0:39,0:39:90.26:0,90,1068	0/0:10,0:10:30.09:0,30,362	1/1:3,21:24:60.08:573,60,0	1/1:1,29:30:81.12:779,81,0	0/0:15,0:15:45.10:0,45,528	0/0:19,0:19:51.14:0,51,604	1/1:1,19:20:57.09:550,57,0	1/1:2,29:31:78.12:753,78,0	1/1:2,20:22:54.08:522,54,0	1/1:1,28:29:78.13:753,78,0	1/1:1,27:28:81.13:782,81,0	0/0:2,0:22:53.64:0,54,275	0/0:4,0:28:66.25:0,66,349	0/0:4,0:14:28.87:0,29,156	0/0:23,0:23:63.19:0,63,761	0/0:22,0:22:63.18:0,63,751	0/0:16,0:16:48.13:0,48,568	1/1:5,24:29:63.10:608,63,0	1/1:4,22:26:66.10:637,66,0	0/0:2,0:29:69.12:0,69,361	1/1:0,22:22:66.11:637,66,0
chr10	46288025	.	TAC	T	12778.20	PASS	AB=0.517;AC=23;AF=0.411;AN=56;BaseQRankSum=15.670;DP=767;FS=4.936;HRun=0;HaplotypeScore=93.8617;InbreedingCoeff=0.9196;MQ=87.44;MQ0=0;MQRankSum=-1.677;QD=40.82;ReadPosRankSum=2.945;VQSLOD=6.2523;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,135,2595	1/1:0,6:6:12.04:184,12,0	0/0:27,0:27:81.26:0,81,1461	0/0:24,0:25:53.94:0,54,1136	1/1:0,35:35:96.33:1470,96,0	0/0:19,0:19:57.20:0,57,1101	0/0:23,0:23:66.23:0,66,1275	0/0:23,0:23:66.23:0,66,1262	0/0:27,0:27:81.25:0,81,1498	1/1:0,31:31:93.29:1382,93,0	1/1:1,20:21:57.19:873,57,0	0/0:34,0:34:99:0,102,1970	0/0:22,0:22:66.23:0,66,1275	1/1:1,38:39:93.79:1424,94,0	1/1:2,34:36:93.32:1424,93,0	0/1:2,28:30:34.64:1067,0,35	1/1:1,33:34:96.33:1470,96,0	1/1:0,20:20:48.16:728,48,0	0/0:17,0:17:51.17:0,51,953	0/0:27,0:27:81.28:0,81,1555	0/0:51,0:51:99:0,150,2828	0/0:30,0:30:90.31:0,90,1737	0/0:25,0:25:72.25:0,72,1390	0/0:35,0:35:99:0,102,1970	1/1:0,21:21:63.21:965,63,0	1/1:0,34:34:99:1562,102,0	0/0:23,0:23:69.24:0,69,1333	1/1:1,5:6:15.05:230,15,0
chr10	46290130	.	C	CT	12207.77	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-7.817;DP=735;FS=2.325;HRun=1;HaplotypeScore=75.5023;InbreedingCoeff=0.9998;MQ=80.83;MQ0=0;MQRankSum=-2.362;QD=40.69;ReadPosRankSum=2.725;VQSLOD=5.5818;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,117,1516	1/1:1,18:19:54.18:805,54,0	0/0:20,0:20:26.91:0,27,615	0/0:22,0:22:44.33:0,44,539	1/1:2,27:29:72.16:1025,72,0	0/0:24,0:24:69.22:0,69,895	0/0:29,0:29:87.25:0,87,1099	0/0:25,0:25:69.22:0,69,895	0/0:27,0:27:81.26:0,81,1052	1/1:0,27:27:81.23:1155,81,0	1/1:2,18:20:45.15:675,45,0	0/0:26,0:26:75.24:0,75,974	0/0:29,0:29:84.27:0,84,1089	1/1:2,28:30:78.26:1169,78,0	1/1:0,29:29:87.29:1304,87,0	1/1:3,36:39:60.38:1400,60,0	1/1:0,30:30:87.29:1304,87,0	1/1:0,25:25:75.25:1124,75,0	0/0:26,0:26:75.21:0,75,935	0/0:22,0:22:63.20:0,63,817	0/0:27,0:27:78.25:0,78,1012	0/0:23,0:23:66.21:0,66,857	0/0:30,0:30:87.28:0,87,1127	0/0:37,0:37:99:0,102,1324	1/1:0,17:17:51.17:764,51,0	1/1:2,22:24:66.22:988,66,0	0/0:28,0:28:75.23:0,75,954	1/1:0,11:11:33.11:495,33,0
chr10	46292712	.	TCCCTGTCGGTC	T	11553.79	PASS	AC=22;AF=0.407;AN=54;BaseQRankSum=15.017;DP=547;FS=1.269;HRun=0;HaplotypeScore=188.8475;InbreedingCoeff=0.9420;MQ=75.69;MQ0=0;MQRankSum=-14.161;QD=60.49;ReadPosRankSum=2.158;VQSLOD=4.8826;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,117,6180	1/1:1,5:6:8.99:230,9,0	0/0:17,0:17:51.10:0,51,1987	0/0:13,0:13:33.10:0,33,1539	1/1:1,6:7:5.69:211,6,0	0/0:21,0:21:63.22:0,63,3241	0/0:24,0:24:57.20:0,57,3250	0/0:24,0:24:66.22:0,66,3255	0/0:22,0:22:60.18:0,60,3143	1/1:6,10:16:20.27:668,20,0	1/1:0,2:2:6.02:208,6,0	0/0:34,0:34:96.33:0,96,5382	0/0:18,0:18:54.19:0,54,2959	1/1:4,27:31:60.21:2115,60,0	1/1:1,25:26:57.67:2009,58,0	1/1:2,19:21:51.18:1799,51,0	1/1:9,21:30:36.12:1201,36,0	1/1:5,14:19:30.10:1059,30,0	0/0:19,0:19:48.16:0,48,2450	0/0:3,0:3:6.02:0,6,344	0/0:58,0:58:99:0,172,9162	0/0:15,0:15:42.14:0,42,2292	0/0:15,0:15:45.15:0,45,2484	0/0:19,0:19:54.19:0,54,2927	1/1:2,9:11:18.06:613,18,0	1/1:5,17:22:51.17:1442,51,0	0/0:12,0:12:30.10:0,30,1583	./.
chr10	46294577	.	C	CAGTCTT	11462.51	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-5.183;DP=738;FS=8.888;HRun=0;HaplotypeScore=167.1859;InbreedingCoeff=0.9995;MQ=71.44;MQ0=1;MQRankSum=-16.534;QD=59.70;ReadPosRankSum=-1.092;VQSLOD=4.6676;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,20:33:60.55:1789,61,0	0/0:9,0:9:27.07:0,27,530	0/0:26,0:26:62.83:0,63,1190	0/0:24,0:22:48.11:0,48,968	0/0:14,0:14:36.11:0,36,760	0/0:13,0:13:39.13:0,39,887	0/0:31,0:31:81.25:0,81,1763	0/0:36,0:36:88.08:0,88,1783	1/1:3,22:26:60.21:2079,60,0	0/0:24,0:24:66.22:0,66,1456	0/0:15,0:15:30.09:0,30,641	1/1:5,24:31:72.25:2454,72,0	1/1:6,24:35:73.99:2151,74,0	0/0:24,0:24:69.22:0,69,1513	0/0:35,0:35:93.28:0,93,1974	0/0:34,0:34:99:0,102,2238	0/0:30,0:30:87.30:0,87,1898	0/0:28,0:28:78.27:0,78,1759	0/0:25,0:25:69.19:0,69,1393	0/0:21,0:21:57.15:0,57,1171	0/0:66,0:66:99:0,186,4136	1/1:1,17:21:45.02:1385,45,0	1/1:0,13:16:29.66:693,30,0	1/1:9,15:30:31.46:910,31,0	0/0:19,0:19:44.95:0,45,928	0/0:34,0:34:93.28:0,93,2020	0/0:23,0:23:66.20:0,66,1395	0/0:15,0:15:45.15:0,45,1025
chr10	46295044	.	T	TC	1455.49	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-9.295;DP=584;FS=0.000;HRun=5;HaplotypeScore=60.1620;InbreedingCoeff=0.9893;MQ=92.25;MQ0=0;MQRankSum=-3.793;QD=30.32;ReadPosRankSum=0.397;VQSLOD=3.9344;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:96.20:0,96,1015	0/0:7,0:7:21.05:0,21,225	0/0:28,0:28:47.75:0,48,500	0/0:23,0:23:51.09:0,51,533	0/0:22,0:22:54.13:0,54,580	1/1:2,17:19:48.09:610,48,0	1/1:2,27:29:75.20:967,75,0	0/0:23,0:23:57.13:0,57,601	0/0:17,0:17:48.12:0,48,515	0/0:25,0:25:66.16:0,66,709	0/0:10,0:10:30.06:0,30,314	0/0:25,0:25:60.12:0,60,634	0/0:20,0:20:57.14:0,57,612	0/0:27,0:27:66.16:0,66,708	0/0:23,0:23:66.15:0,66,702	0/0:16,0:16:42.10:0,42,451	0/0:23,0:23:60.11:0,60,625	0/0:30,0:30:78.10:0,78,803	0/0:17,0:17:39.09:0,39,417	0/0:9,0:9:21.05:0,21,226	0/0:42,0:42:96.13:0,96,992	0/0:11,0:11:24.06:0,24,258	0/0:8,0:8:21.05:0,21,225	0/0:32,0:32:87.22:0,87,935	0/0:9,0:9:24.06:0,24,256	0/0:18,0:18:45.09:0,45,470	0/0:23,0:23:60.05:0,60,606	0/0:9,0:9:21.05:0,21,226
chr10	46295184	.	ACCCCCC	A	1205.71	PASS	AB=0.779;AC=8;AF=0.143;AN=56;BaseQRankSum=-0.461;DP=524;FS=23.916;HRun=6;HaplotypeScore=117.0866;InbreedingCoeff=-0.1969;MQ=45.33;MQ0=44;MQRankSum=-2.443;QD=9.65;ReadPosRankSum=2.044;VQSLOD=-0.4363;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:10,5:14:99:184,0,288	0/0:9,0:9:20.19:0,20,545	0/0:60,0:7:20.46:0,20,283	0/0:54,0:8:1.65:0,2,223	0/0:24,0:24:26.59:0,27,752	0/0:14,0:14:42.05:0,42,564	0/0:17,0:15:39.06:0,39,451	0/0:24,0:21:51.39:0,51,1614	0/1:7,3:10:46.45:46,0,195	0/0:23,0:23:55.43:0,55,920	0/0:14,0:13:27.02:0,27,366	0/0:16,4:18:36.10:0,36,510	0/0:6,3:9:15.04:0,15,177	0/0:13,0:12:15.05:0,15,263	0/0:21,0:21:51.17:0,51,1182	0/0:16,0:15:45.14:0,45,782	0/0:30,0:27:44.68:0,45,747	0/1:27,0:26:38.89:39,0,441	0/1:11,7:15:99:230,0,472	0/1:7,7:12:87.36:345,0,87	0/0:3,0:3:3.01:0,3,46	0/0:1,0:1:3.01:0,3,32	0/1:10,1:10:50.29:50,0,269	0/1:8,2:10:63.63:64,0,88	0/0:18,0:17:26.44:0,26,378	0/0:20,0:20:43.86:0,44,869	0/1:8,10:16:99:382,0,155	0/0:8,0:7:12.04:0,12,193
chr10	46295189	.	CCAAAA	C	4867.25	PASS	AB=0.953;AC=30;AF=0.556;AN=54;BaseQRankSum=-5.283;DP=536;FS=31.757;HRun=0;HaplotypeScore=98.5283;InbreedingCoeff=0.2129;MQ=48.56;MQ0=44;MQRankSum=0.478;QD=14.88;ReadPosRankSum=-1.830;VQSLOD=2.2354;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:16:15.31:0,15,250	0/1:9,0:9:46.47:67,0,46	0/0:66,0:8:16.96:0,17,171	0/0:58,0:10:11.48:0,11,104	0/1:3,19:25:17.11:333,0,17	0/1:16,0:16:5.19:5,0,328	0/1:16,0:15:46.96:47,0,250	0/0:27,0:24:62.19:0,62,1133	0/1:12,0:10:9.51:10,0,171	1/1:2,20:24:59.57:767,60,0	1/1:6,6:13:26.91:366,27,0	0/1:18,0:16:0.89:1,0,206	0/1:11,0:11:30.62:31,0,117	1/1:11,1:11:11.89:124,12,0	0/1:22,0:22:36.59:257,0,37	1/1:8,4:13:38.67:452,39,0	1/1:16,8:24:38.22:610,38,0	1/1:4,19:25:33.32:621,33,0	0/0:17,0:14:1.95:0,2,313	0/1:14,0:12:26.38:26,0,99	./.	1/1:2,0:2:2.80:13,3,0	0/0:14,0:13:10.10:0,10,229	0/0:8,0:8:4.55:0,5,28	1/1:3,17:18:23.99:361,24,0	1/1:12,5:20:56.90:643,57,0	0/1:17,0:14:21.37:21,0,144	1/1:6,1:7:9.88:111,10,0
chr10	46295614	.	TC	T	13577.32	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=17.861;DP=843;FS=5.011;HRun=1;HaplotypeScore=97.2302;InbreedingCoeff=1.0000;MQ=86.22;MQ0=0;MQRankSum=-3.661;QD=39.35;ReadPosRankSum=4.072;VQSLOD=5.1935;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:56:99:0,169,2626	1/1:0,15:15:45.15:629,45,0	0/0:32,0:32:96.17:0,96,1438	0/0:24,0:24:66.22:0,66,1020	1/1:0,29:29:84.28:1175,84,0	0/0:23,0:23:69.20:0,69,1053	0/0:25,0:25:75.24:0,75,1176	0/0:28,0:28:84.29:0,84,1341	0/0:34,0:34:99:0,102,1584	1/1:0,34:34:99:1409,102,0	1/1:0,18:18:51.17:713,51,0	0/0:35,0:35:99:0,102,1606	0/0:32,0:32:96.32:0,96,1512	1/1:0,27:27:78.26:1091,78,0	1/1:0,32:32:81.27:1133,81,0	1/1:0,45:45:99:1720,123,0	1/1:0,28:28:72.24:1007,72,0	1/1:0,37:37:99:1469,105,0	0/0:28,0:28:84.22:0,84,1280	0/0:26,0:26:72.23:0,72,1128	0/0:50,0:50:99:0,148,2343	0/0:25,0:25:69.69:0,70,1078	0/0:23,0:23:66.21:0,66,1024	0/0:31,0:31:93.30:0,93,1461	1/1:0,20:20:51.17:713,51,0	1/1:0,44:44:99:1847,132,0	0/0:26,0:26:78.27:0,78,1238	1/1:0,16:16:48.16:671,48,0
chr10	46297429	.	ATC	A	2082.84	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.816;DP=743;FS=12.983;HRun=0;HaplotypeScore=94.9586;InbreedingCoeff=0.9999;MQ=92.91;MQ0=0;MQRankSum=-1.688;QD=40.05;ReadPosRankSum=1.860;VQSLOD=4.4466;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,123,2267	0/0:14,0:14:39.13:0,39,737	0/0:26,0:26:71.09:0,71,1345	0/0:37,0:37:99:0,104,1912	0/0:18,0:18:54.17:0,54,987	1/1:0,33:33:93.32:1424,93,0	1/1:0,19:19:51.17:781,51,0	0/0:43,0:43:99:0,114,2164	0/0:22,0:22:63.22:0,63,1207	0/0:29,0:29:81.26:0,81,1495	0/0:19,0:19:57.20:0,57,1067	0/0:30,0:30:90.31:0,90,1728	0/0:30,0:30:87.28:0,87,1646	0/0:21,0:21:60.21:0,60,1147	0/0:36,0:36:99:0,105,2018	0/0:35,0:35:99:0,105,2008	0/0:22,0:22:66.23:0,66,1256	0/0:26,0:26:78.25:0,78,1471	0/0:26,0:26:78.26:0,78,1476	0/0:13,0:13:39.13:0,39,732	0/0:29,0:29:87.30:0,87,1670	0/0:20,0:20:57.15:0,57,1041	0/0:20,0:20:53.85:0,54,1032	0/0:31,0:31:93.32:0,93,1771	0/0:31,0:31:92.52:0,93,1702	0/0:31,0:31:90.28:0,90,1627	0/0:24,0:24:72.25:0,72,1370	0/0:16,0:16:48.16:0,48,925
chr10	46300436	.	C	CCAGA	24840.70	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-13.581;DP=596;FS=0.000;HRun=0;HaplotypeScore=93.0849;InbreedingCoeff=0.9481;MQ=78.97;MQ0=2;MQRankSum=-6.025;QD=61.64;ReadPosRankSum=5.559;VQSLOD=6.6562;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,36:46:90.78:2387,91,0	1/1:1,4:5:12.04:323,12,0	0/0:13,0:13:30.29:0,30,605	0/0:22,0:22:63.21:0,63,1124	1/1:1,5:7:5.88:162,6,0	0/0:24,0:24:69.24:0,69,1296	0/0:40,0:40:99:0,105,1872	0/0:20,0:20:60.20:0,60,1097	1/1:4,22:28:66.23:1767,66,0	1/1:5,8:13:33.11:848,33,0	1/1:1,4:5:9.03:242,9,0	1/1:2,27:29:78.27:2078,78,0	1/1:2,19:22:51.17:1371,51,0	1/1:3,28:31:84.29:2219,84,0	1/1:2,15:17:36.12:971,36,0	1/1:3,20:23:57.20:1538,57,0	1/1:3,39:43:99:2913,108,0	1/1:5,32:36:81.28:2166,81,0	0/0:15,0:15:45.14:0,45,820	0/0:13,0:13:33.11:0,33,626	0/0:37,0:37:93.32:0,93,1764	1/1:1,19:21:48.16:1293,48,0	1/1:2,7:9:21.07:566,21,0	1/1:6,28:35:78.27:2102,78,0	1/1:1,5:7:12.04:323,12,0	1/1:4,15:20:54.19:1409,54,0	0/0:9,0:9:27.06:0,27,475	1/1:2,2:4:6.02:162,6,0
chr10	46305150	.	A	AGATCC	2460.36	PASS	AC=6;AF=0.111;AN=54;BaseQRankSum=-3.849;DP=621;FS=4.869;HRun=0;HaplotypeScore=98.2156;InbreedingCoeff=0.9493;MQ=55.98;MQ0=16;MQRankSum=-7.605;QD=35.66;ReadPosRankSum=-2.783;VQSLOD=2.6455;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,105,2127	0/0:9,0:7:21.07:0,21,435	0/0:32,0:8:16.89:0,17,238	0/0:21,0:5:9.03:0,9,148	0/0:26,0:24:63.22:0,63,1293	0/0:21,0:21:60.21:0,60,1244	0/0:13,0:12:21.07:0,21,430	0/0:40,0:37:99:0,105,2057	0/0:21,0:20:51.18:0,51,1045	0/0:31,0:29:87.30:0,87,1793	0/0:12,0:9:24.08:0,24,498	0/0:23,0:23:63.21:0,63,1248	0/0:21,0:21:59.99:0,60,1218	0/0:15,0:14:39.13:0,39,809	0/0:25,0:23:69.24:0,69,1405	0/0:22,0:22:63.22:0,63,1294	0/0:29,0:29:72.25:0,72,1451	0/0:34,0:32:81.28:0,81,1614	1/1:19,14:29:63.17:1737,63,0	1/1:3,14:16:9.03:276,9,0	./.	0/0:20,0:20:57.18:0,57,1126	0/0:19,0:16:45.15:0,45,933	0/0:17,0:17:45.11:0,45,854	0/0:17,0:16:45.15:0,45,921	0/0:24,0:21:63.22:0,63,1279	1/1:3,16:17:21.07:583,21,0	0/0:11,0:11:27.09:0,27,560
chr10	46305214	.	T	TA	4254.21	PASS	AB=0.545;AC=21;AF=0.375;AN=56;BaseQRankSum=-12.454;DP=645;FS=4.340;HRun=12;HaplotypeScore=77.2570;InbreedingCoeff=0.8849;MQ=56.08;MQ0=11;MQRankSum=3.476;QD=15.19;ReadPosRankSum=-0.640;VQSLOD=5.4567;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:37:54.98:0,55,159	0/0:9,0:10:25.76:0,26,173	0/0:12,0:4:8.21:0,8,64	0/0:8,0:5:8.91:0,9,65	1/1:12,22:36:3.13:482,3,0	0/0:24,1:25:36.06:0,36,419	0/0:10,0:10:23.85:0,24,175	1/1:14,31:36:53.07:642,53,0	0/0:6,0:31:45.32:0,45,134	1/1:10,22:34:43.08:570,43,0	1/1:7,18:25:50.81:454,51,0	0/0:7,0:29:43.15:0,43,128	0/0:5,0:20:26.46:0,26,76	0/1:2,10:12:6.88:102,0,7	0/0:29,0:31:73.62:0,74,530	1/1:7,10:18:24.04:234,24,0	1/1:6,18:25:41.90:394,42,0	1/1:7,20:25:36.59:436,37,0	0/0:22,0:21:43.62:0,44,307	0/0:32,0:32:74.46:0,74,542	0/0:15,0:15:35.76:0,36,260	0/0:3,0:14:17.04:0,17,54	0/0:5,0:22:31.26:0,31,104	0/0:3,0:12:18.32:0,18,53	1/1:7,18:25:41.99:396,42,0	1/1:6,21:27:29.18:430,29,0	0/0:31,0:29:30.71:0,31,387	1/1:0,5:5:12.02:117,12,0
chr10	46306739	.	C	CTAGCTGAG	2090	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-5.252;DP=393;FS=28.293;HRun=0;HaplotypeScore=112.5233;InbreedingCoeff=0.8870;MQ=91.35;MQ0=0;MQRankSum=-6.521;QD=67.42;ReadPosRankSum=1.200;VQSLOD=1.3694;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:36.11:0,36,883	0/0:5,0:5:2.21:0,2,214	0/0:25,0:21:72.14:0,72,1480	0/0:17,0:16:36.10:0,36,851	0/0:17,0:17:42.14:0,42,1135	1/1:2,8:14:24.02:1031,24,0	1/1:2,11:17:30.06:1180,30,0	0/0:28,0:28:72.23:0,72,1774	0/0:8,0:8:21.07:0,21,569	0/0:14,0:14:39.13:0,39,1006	0/0:11,0:11:24.08:0,24,650	0/0:18,0:18:51.18:0,51,1349	0/0:10,0:10:30.10:0,30,779	0/0:6,0:6:18.06:0,18,487	0/0:17,0:17:45.10:0,45,1158	0/0:16,0:16:45.14:0,45,1142	0/0:6,0:6:15.05:0,15,406	0/0:14,0:14:36.12:0,36,864	0/0:20,0:20:57.18:0,57,1450	0/0:9,0:9:27.09:0,27,724	0/0:16,0:16:39.12:0,39,1000	0/0:10,0:10:24.08:0,24,618	0/0:12,0:12:33.11:0,33,895	0/0:16,0:16:39.13:0,39,1057	0/0:14,0:14:33.11:0,33,892	0/0:17,0:17:33.79:0,34,1016	0/0:14,0:14:33.11:0,33,894	0/0:7,0:7:18.06:0,18,482
chr10	46307299	.	TTTTTTG	T	4857.78	PASS	AB=1.000;AC=33;AF=0.611;AN=54;BaseQRankSum=1.553;DP=524;FS=10.600;HRun=0;HaplotypeScore=119.1890;InbreedingCoeff=0.5134;MQ=66.72;MQ0=4;MQRankSum=-3.782;QD=13.53;ReadPosRankSum=0.261;VQSLOD=2.8927;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:15:14.62:102,15,0	0/1:4,0:4:0:0,0,0	./.	0/0:13,0:9:5.68:0,6,44	1/1:5,14:19:50.65:518,51,0	0/0:22,0:22:48.12:0,48,1003	0/0:24,0:24:49.35:0,49,840	0/1:30,0:29:14.22:130,0,14	0/1:19,0:19:49.89:93,0,50	1/1:5,14:19:42.04:640,42,0	1/1:10,9:19:26.91:359,27,0	0/1:15,0:14:3.75:75,0,4	0/1:20,0:20:14.57:120,0,15	1/1:5,11:16:9.03:185,9,0	0/1:19,0:18:5.83:144,0,6	1/1:15,11:26:26.67:489,27,0	1/1:3,7:10:12:204,12,0	1/1:6,10:16:15.01:266,15,0	0/0:22,0:22:26.99:0,27,431	0/0:20,0:20:45.14:0,45,1164	0/0:12,0:12:12.01:0,12,267	0/1:20,0:20:0.20:80,0,0	1/1:20,0:20:6.56:85,7,0	1/1:23,0:23:6.70:145,7,0	1/1:6,13:19:18.02:319,18,0	1/1:8,12:20:36.04:517,36,0	0/0:34,0:34:42.60:0,43,1017	1/1:6,4:10:24.06:387,24,0
chr10	46307318	.	TTTTTG	T	5371.28	PASS	AB=0.981;AC=36;AF=0.643;AN=56;BaseQRankSum=5.097;DP=518;FS=8.088;HRun=0;HaplotypeScore=123.8984;InbreedingCoeff=0.1991;MQ=56.21;MQ0=6;MQRankSum=-4.189;QD=12.94;ReadPosRankSum=1.157;VQSLOD=3.5226;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,1:14:14.95:159,15,0	1/1:6,0:6:12.54:81,13,0	0/1:16,0:4:13.48:32,0,13	0/0:11,0:4:5.58:0,6,37	0/1:24,2:26:53.12:342,0,53	0/0:22,0:22:59.18:0,59,952	0/0:21,0:21:51.07:0,51,677	1/1:20,0:18:29.17:219,29,0	1/1:18,1:19:41.61:328,42,0	1/1:21,0:21:39.13:431,39,0	0/1:19,1:20:99:223,0,99	1/1:13,0:12:26.51:184,27,0	1/1:21,0:21:42.33:321,42,0	1/1:16,0:16:9.02:123,9,0	1/1:22,1:22:31.30:375,31,0	1/1:18,2:20:6.16:390,6,0	0/1:11,0:11:5.58:129,0,6	0/1:16,0:16:5.75:149,0,6	0/1:22,0:22:42.24:42,0,324	0/0:18,0:18:8.80:0,9,918	0/1:12,0:12:12.84:13,0,204	1/1:20,0:20:45.97:305,46,0	1/1:22,0:22:50.91:407,51,0	1/1:23,1:24:39.02:317,39,0	0/1:19,0:19:55.47:183,0,55	0/1:19,0:19:14.70:312,0,15	0/0:31,0:31:11.65:0,12,861	0/1:13,1:14:11.64:306,0,12
chr10	46307319	.	TTTTG	T	6476.88	PASS	AB=0.996;AC=35;AF=0.625;AN=56;BaseQRankSum=2.222;DP=522;FS=2.408;HRun=0;HaplotypeScore=112.5029;InbreedingCoeff=0.1844;MQ=56.22;MQ0=6;MQRankSum=-5.970;QD=15.99;ReadPosRankSum=1.690;VQSLOD=4.5448;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:3,12:14:14.96:193,15,0	1/1:6,0:6:3.38:49,3,0	0/1:16,0:4:24.30:29,0,24	0/0:11,0:4:5.68:0,6,32	0/1:25,1:26:99:264,0,106	0/0:22,0:22:59.87:0,60,772	0/0:21,0:21:48.63:0,49,519	1/1:20,0:18:40.73:345,41,0	1/1:15,4:19:53.90:604,54,0	1/1:22,0:22:7.15:341,7,0	0/1:21,0:21:99:174,0,168	1/1:12,1:12:29.67:293,30,0	1/1:17,4:21:52.92:576,53,0	1/1:16,0:16:9.03:106,9,0	1/1:22,1:22:27.98:478,28,0	1/1:19,0:19:1.04:306,1,0	0/1:11,0:11:11.42:115,0,11	0/1:16,0:16:15.66:124,0,16	0/1:22,0:22:9.18:9,0,269	0/0:18,0:18:1.28:0,1,736	0/0:13,0:13:5.87:0,6,175	1/1:18,2:20:46.75:556,47,0	1/1:18,5:23:58.19:668,58,0	1/1:16,8:24:42.36:570,42,0	0/1:19,0:19:82.97:153,0,83	0/1:19,0:19:32.48:271,0,32	0/0:32,0:32:13.19:0,13,704	0/1:14,0:14:22.35:255,0,22
chr10	46307320	.	TTTG	T	5805.80	PASS	AB=0.992;AC=33;AF=0.589;AN=56;BaseQRankSum=2.380;DP=513;FS=2.364;HRun=0;HaplotypeScore=106.0337;InbreedingCoeff=0.0613;MQ=56.23;MQ0=6;MQRankSum=-5.790;QD=13.56;ReadPosRankSum=0.891;VQSLOD=4.5254;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,1:14:14.96:151,15,0	0/1:5,0:5:0.19:40,0,0	0/1:15,0:4:16.91:17,0,24	0/0:11,0:4:5.72:0,6,22	0/1:26,0:26:99:226,0,150	0/0:22,0:22:59.70:0,60,569	0/0:20,0:20:25.03:0,25,345	1/1:16,3:17:42:497,42,0	1/1:18,1:19:53.94:511,54,0	0/1:22,0:22:0.39:288,0,0	0/1:20,0:20:99:143,0,190	1/1:12,2:13:32.53:338,33,0	1/1:19,1:20:51.12:452,51,0	1/1:16,0:16:10.57:92,11,0	1/1:22,1:22:34.15:471,34,0	0/1:16,0:16:1.31:252,0,1	0/1:11,0:11:13.37:99,0,13	0/1:15,0:15:21.12:102,0,21	0/1:21,1:22:23.40:23,0,227	0/0:19,0:19:0.90:0,1,551	0/0:13,0:13:6.18:0,6,135	1/1:17,3:20:47.17:463,47,0	1/1:20,3:23:59.91:600,60,0	1/1:23,1:24:42.39:442,42,0	0/1:18,0:18:96.17:122,0,96	0/1:19,0:19:25.57:247,0,26	0/1:30,2:32:6.97:7,0,537	0/1:14,0:14:19.35:222,0,19
chr10	46307321	.	TTG	T	4968.31	PASS	AB=1.000;AC=34;AF=0.607;AN=56;BaseQRankSum=4.869;DP=512;FS=9.950;HRun=0;HaplotypeScore=100.9219;InbreedingCoeff=0.1283;MQ=55.99;MQ0=6;MQRankSum=-4.980;QD=12.24;ReadPosRankSum=1.684;VQSLOD=4.2728;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:14,1:14:14.95:134,15,0	1/1:5,0:5:2.88:47,3,0	0/1:16,0:4:5.65:6,0,11	0/1:11,0:3:0.55:1,0,7	0/1:26,0:26:99:188,0,233	0/0:22,0:22:56.72:0,57,372	0/0:20,0:20:32.84:0,33,262	1/1:15,4:17:41.73:407,42,0	1/1:19,0:19:53.37:455,53,0	0/1:22,0:22:28.83:227,0,29	0/1:19,0:19:99:115,0,225	1/1:13,1:13:33.39:294,33,0	1/1:21,0:21:53.30:422,53,0	1/1:16,0:16:5.16:65,5,0	1/1:22,1:22:38.28:426,38,0	0/1:16,0:16:13.23:201,0,13	0/1:11,0:11:26.20:82,0,26	0/1:15,0:15:44.64:75,0,45	0/1:22,0:22:39.73:40,0,183	0/0:19,0:19:22.67:0,23,395	0/0:13,0:13:15.34:0,15,117	1/1:20,0:20:37.02:372,37,0	1/1:21,1:22:59.43:509,59,0	1/1:24,0:24:43.97:392,44,0	0/1:18,0:18:93.60:94,0,153	0/1:18,0:18:77.86:200,0,78	0/0:32,0:32:12.32:0,12,402	0/1:14,0:14:11.04:219,0,11
chr10	46307322	.	TG	T	4531.69	PASS	AB=0.970;AC=35;AF=0.625;AN=56;BaseQRankSum=5.617;DP=507;FS=27.847;HRun=1;HaplotypeScore=95.7500;InbreedingCoeff=0.1552;MQ=58.05;MQ0=6;MQRankSum=-5.305;QD=11.05;ReadPosRankSum=1.137;VQSLOD=1.5769;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:14:14.93:116,15,0	1/1:4,1:5:11.98:71,12,0	0/1:16,0:4:8.73:9,0,22	0/0:12,0:5:1.82:0,2,14	0/1:25,1:26:99:176,0,216	0/0:21,0:21:19.88:0,20,188	0/1:19,1:20:3.49:3,0,148	1/1:19,1:18:41.61:371,42,0	1/1:19,0:19:52.61:417,53,0	0/1:23,0:23:48.05:177,0,48	0/1:17,0:17:91.28:91,0,166	1/1:14,0:13:34.14:271,34,0	1/1:21,0:21:54.74:412,55,0	1/1:16,0:16:1.98:46,2,0	1/1:20,2:21:54.34:457,54,0	0/1:16,0:16:1.18:165,0,1	0/1:11,1:12:38.18:62,0,38	0/1:13,2:15:46.61:52,0,47	0/1:19,1:20:70.12:70,0,153	0/0:19,0:19:26.66:0,27,256	0/0:12,0:12:15.70:0,16,86	1/1:18,1:19:45.24:353,45,0	1/1:20,0:20:55.06:432,55,0	1/1:21,2:23:43.87:349,44,0	0/1:18,0:18:65.75:66,0,127	0/1:19,0:19:99:162,0,103	0/0:32,0:32:17.35:0,17,282	1/1:14,0:14:14.90:201,15,0
chr10	46310810	.	T	TA	11774.78	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=-17.126;DP=704;FS=1.686;HRun=7;HaplotypeScore=68.2943;InbreedingCoeff=0.9989;MQ=72.40;MQ0=0;MQRankSum=0.140;QD=29.58;ReadPosRankSum=-0.080;VQSLOD=5.3038;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,27:28:78.24:942,78,0	1/1:4,9:13:27.08:326,27,0	0/0:19,0:18:32.23:0,32,296	0/0:12,0:12:18.99:0,19,250	0/0:39,0:39:99:0,108,1037	1/1:5,26:31:75.19:890,75,0	1/1:6,13:19:36.11:435,36,0	1/1:7,28:35:79.97:996,80,0	1/1:0,18:18:54.17:652,54,0	0/0:38,0:38:90.12:0,90,865	0/0:26,0:26:69.08:0,69,659	1/1:3,15:19:48.14:571,48,0	1/1:2,24:26:66.20:797,66,0	0/0:18,0:18:42.06:0,42,406	1/1:1,22:23:57.17:689,57,0	0/0:19,0:19:51.08:0,51,492	0/0:22,0:22:60.09:0,60,579	0/0:34,0:34:96.11:0,96,913	1/1:4,17:21:51.16:616,51,0	1/1:4,31:35:93.24:1107,93,0	1/1:1,12:13:36.11:435,36,0	1/1:7,22:29:63.15:745,63,0	1/1:5,33:38:84.26:1015,84,0	1/1:0,21:21:54.17:652,54,0	0/0:38,0:38:99:0,105,1014	0/0:27,0:27:75.10:0,75,719	1/1:2,27:29:75.23:906,75,0	0/0:13,0:13:39.06:0,39,377
chr10	46312872	.	G	GA	1290.49	PASS	AB=0.556;AC=17;AF=0.327;AN=52;BaseQRankSum=2.833;DP=407;FS=2.845;HRun=9;HaplotypeScore=82.7155;InbreedingCoeff=0.8390;MQ=36.32;MQ0=44;MQRankSum=-0.538;QD=10.08;ReadPosRankSum=-2.118;VQSLOD=2.3839;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:12,10:17:29.80:270,30,0	1/1:4,1:5:8.99:86,9,0	./.	./.	0/0:20,0:19:19.07:0,19,159	0/0:11,0:9:11.95:0,12,104	0/0:13,0:12:12.81:0,13,126	0/0:22,0:14:26.01:0,26,214	1/1:8,5:13:15.04:166,15,0	0/0:12,0:11:20.95:0,21,175	0/0:11,0:9:5.96:0,6,52	1/1:12,7:15:17.33:171,17,0	1/1:9,8:14:16.86:167,17,0	0/0:14,0:13:23.88:0,24,206	1/1:8,3:10:17.74:158,18,0	0/0:8,0:8:11.98:0,12,104	0/0:25,2:25:11.74:0,12,330	0/0:18,0:16:11.11:0,11,103	0/0:18,0:13:17.92:0,18,152	0/0:14,0:11:15.94:0,16,174	0/0:14,0:9:5.90:0,6,52	1/1:6,5:9:14.83:125,15,0	0/1:2,8:9:1.97:205,0,2	1/1:12,6:14:12.50:134,13,0	0/0:22,0:20:34.24:0,34,287	0/0:21,0:21:38.88:0,39,328	0/0:19,0:18:15.69:0,16,239	0/0:11,0:4:5.99:0,6,52
chr10	46314109	.	TTCTCTCTCTCTC	T	114	PASS	AC=10;AF=0.357;AN=28;BaseQRankSum=1.623;DP=420;FS=2.086;HRun=0;HaplotypeScore=124.8075;InbreedingCoeff=0.3933;MQ=69.96;MQ0=29;MQRankSum=0.095;QD=1.54;ReadPosRankSum=0.286;VQSLOD=2.3589;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:28,0:18:1.55:0,2,4	./.	0/0:8,0:7:2.99:0,3,24	0/0:10,0:10:3.01:0,3,49	./.	0/0:19,0:16:3.01:0,3,97	1/1:19,0:19:3.01:41,3,0	0/0:18,0:18:6.96:0,7,27	./.	1/1:10,0:9:2.94:18,3,0	./.	1/1:10,0:9:3.01:54,3,0	1/1:17,0:18:0.47:1,0,0	./.	1/1:11,5:16:3.01:97,3,0	./.	0/0:12,0:8:5.05:0,5,48	./.	0/0:39,0:35:5.38:0,5,94	./.	./.	./.	./.	0/0:10,0:9:2.99:0,3,23	0/0:15,0:15:17.62:0,18,226	./.
chr10	46314180	.	T	TAC	251.59	PASS	AB=1.000;AC=4;AF=0.111;AN=36;BaseQRankSum=-0.858;DP=383;FS=0.000;HRun=0;HaplotypeScore=60.9750;InbreedingCoeff=0.4694;MQ=28.42;MQ0=65;MQRankSum=3.008;QD=5.99;ReadPosRankSum=-1.032;VQSLOD=2.3181;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	./.	./.	0/1:15,0:13:0:0,0,0	1/1:3,12:12:35.83:335,36,0	0/0:21,0:19:5.23:0,5,32	0/0:19,0:18:32.49:0,32,372	./.	0/0:16,0:14:0.47:0,0,1	0/1:12,0:12:0.15:0,0,0	./.	0/0:21,0:19:0.47:0,0,1	0/0:13,0:12:0.47:0,0,1	0/0:14,0:10:1.25:0,1,3	0/0:9,0:6:12.10:0,12,124	0/0:13,0:10:21.54:0,22,266	0/0:15,0:14:0:0,0,0	0/0:33,0:25:0.89:0,1,2	0/0:12,0:9:0:0,0,0	./.	./.	0/0:10,0:8:0.47:0,0,1	0/0:19,0:17:29.78:0,30,378	0/0:13,0:10:3.01:0,3,39	0/0:9,0:4:2.98:0,3,38
chr10	46314190	.	T	TAC	492.81	PASS	AB=1.000;AC=22;AF=0.579;AN=38;BaseQRankSum=-1.803;DP=367;FS=0.000;HRun=0;HaplotypeScore=66.4878;InbreedingCoeff=0.1868;MQ=28.77;MQ0=58;MQRankSum=3.255;QD=2.35;ReadPosRankSum=3.279;VQSLOD=1.3917;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:18:0.89:2,1,0	1/1:5,0:5:0.78:2,1,0	./.	./.	./.	./.	0/0:15,0:14:0:0,0,0	1/1:10,0:7:13.58:56,14,0	0/0:22,0:20:3.72:0,4,11	1/1:15,0:14:23.90:180,24,0	./.	0/0:18,0:16:0:0,0,0	0/0:11,0:11:0:0,0,1	0/0:10,0:8:1.81:0,2,5	0/1:20,0:17:0:0,0,0	1/1:16,0:15:3.56:11,4,0	1/1:13,0:9:2.97:20,3,0	0/1:9,0:6:14.87:15,0,19	0/1:12,0:11:40.54:41,0,71	0/1:14,0:13:0:0,0,0	1/1:32,0:24:2.74:12,3,0	./.	./.	./.	./.	1/1:18,0:16:23.98:230,24,0	0/1:13,0:10:1.79:16,0,2	0/1:8,0:4:8.15:8,0,8
chr10	46314192	.	T	TAC	745.39	PASS	AB=1.000;AC=16;AF=0.471;AN=34;BaseQRankSum=-2.243;DP=345;FS=0.000;HRun=0;HaplotypeScore=53.1402;InbreedingCoeff=0.1913;MQ=28.64;MQ0=55;MQRankSum=2.634;QD=4.41;ReadPosRankSum=2.741;VQSLOD=1.9005;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:18:1.96:0,2,7	0/0:5,0:5:0.47:0,0,1	./.	./.	./.	./.	0/0:14,0:13:0:0,0,0	./.	0/1:22,0:20:0.13:0,0,1	1/1:0,14:14:24.07:279,24,0	./.	0/0:17,0:15:0:0,0,0	1/1:12,0:12:1.91:8,2,0	0/0:11,0:9:2.37:0,2,8	0/1:18,0:15:0:0,0,0	1/1:16,0:15:3.37:10,3,0	./.	0/1:9,0:6:0.82:53,0,1	0/1:10,0:9:19.70:152,0,20	0/0:13,0:12:0:0,0,0	1/1:31,0:23:2.74:12,3,0	./.	./.	./.	./.	1/1:2,16:16:23.98:282,24,0	0/1:13,0:10:1.76:23,0,2	0/1:6,0:3:4.01:16,0,4
chr10	46314194	.	T	TAC	400.53	PASS	AB=0.563;AC=13;AF=0.464;AN=28;BaseQRankSum=-1.956;DP=330;FS=0.000;HRun=0;HaplotypeScore=46.0434;InbreedingCoeff=0.3331;MQ=28.76;MQ0=52;MQRankSum=2.758;QD=4.88;ReadPosRankSum=3.041;VQSLOD=1.8416;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:15:2.22:0,2,7	./.	./.	./.	./.	./.	0/0:14,0:13:0:0,0,0	./.	0/0:23,0:21:1.82:0,2,6	1/1:14,0:14:23.56:144,24,0	./.	0/0:14,0:12:0:0,0,0	1/1:12,0:12:1.98:8,2,0	0/0:11,0:9:2.37:0,2,8	0/0:18,0:15:1.24:0,1,4	0/0:16,0:15:0.47:0,0,1	./.	1/1:9,0:6:9.04:37,9,0	0/1:2,7:8:22.70:129,0,23	./.	./.	./.	./.	./.	./.	1/1:19,0:16:19.14:126,19,0	1/1:13,0:10:2.88:38,3,0	1/1:6,0:3:3.75:10,4,0
chr10	46315318	.	A	ACG	491.72	PASS	AB=0.848;AC=11;AF=0.196;AN=56;BaseQRankSum=6.624;DP=613;FS=5.504;HRun=0;HaplotypeScore=124.6036;InbreedingCoeff=0.4917;MQ=52.17;MQ0=13;MQRankSum=-3.433;QD=4.13;ReadPosRankSum=0.258;VQSLOD=2.6174;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:41.66:0,42,296	1/1:8,0:8:8.63:57,9,0	0/0:28,0:16:43.30:0,43,391	0/0:26,0:14:9.37:0,9,320	0/0:17,0:16:10.63:0,11,105	1/1:11,1:11:4.47:169,4,0	0/1:6,29:37:9.38:192,0,9	1/1:15,0:12:3.78:124,4,0	0/0:22,0:22:10.32:0,10,132	0/0:35,0:33:78.53:0,79,661	0/0:13,0:13:4.85:0,5,71	0/0:26,0:24:47.62:0,48,292	0/0:10,0:10:14.61:0,15,105	0/0:21,0:20:12.51:0,13,169	1/1:18,0:17:11.68:80,12,0	0/0:19,0:19:19.74:0,20,242	0/0:40,0:39:42.59:0,43,355	0/0:23,0:23:34.04:0,34,257	0/0:18,0:14:33.14:0,33,282	0/1:10,0:10:4.93:5,0,122	0/0:40,0:39:9.89:0,10,567	0/0:20,0:20:18.01:0,18,134	0/0:14,0:13:11.49:0,11,74	0/0:38,0:38:45.86:0,46,313	0/0:18,0:18:0.76:0,1,119	0/0:23,0:22:28.36:0,28,308	0/1:19,0:19:12.25:12,0,268	0/0:12,0:11:26.02:0,26,198
chr10	46315320	.	A	ACGCGCGCG	1074.41	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=1.556;DP=630;FS=3.679;HRun=0;HaplotypeScore=181.1248;InbreedingCoeff=0.3871;MQ=53.25;MQ0=13;MQRankSum=-2.083;QD=6.36;ReadPosRankSum=-1.766;VQSLOD=2.1318;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:7.18:0,7,565	1/1:4,5:10:5.89:241,6,0	0/0:29,0:16:48.12:0,48,1088	0/0:28,0:16:45.13:0,45,1128	0/0:15,0:14:11.49:0,11,340	0/1:13,0:12:0.06:0,0,76	0/1:38,0:38:64.58:65,0,80	1/1:19,0:16:41.69:451,42,0	0/0:21,0:21:1.77:0,2,194	0/0:37,0:35:93.81:0,94,2080	0/0:14,0:14:5.19:0,5,250	0/0:25,0:23:5.18:0,5,528	0/1:11,0:11:8.90:9,0,234	0/0:22,0:21:25.72:0,26,603	1/1:17,1:18:20.97:427,21,0	0/0:18,0:18:25.83:0,26,675	0/0:41,0:40:65.62:0,66,1347	0/0:23,0:23:33.09:0,33,739	0/0:18,0:14:36.50:0,37,847	0/0:9,0:9:21.07:0,21,495	0/0:43,0:42:79.63:0,80,2223	0/1:19,0:19:27.35:27,0,212	0/0:14,0:13:13.83:0,14,158	0/1:40,0:40:2.92:3,0,613	0/0:17,0:17:24.08:0,24,523	0/0:24,0:23:60.57:0,61,1234	0/0:19,0:19:30.34:0,30,1086	0/0:11,0:11:28.91:0,29,627
chr10	46316360	.	A	AC	7250.88	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=2.925;DP=470;FS=0.000;HRun=2;HaplotypeScore=96.0499;InbreedingCoeff=0.9822;MQ=72.58;MQ0=0;MQRankSum=-7.593;QD=37.96;ReadPosRankSum=1.030;VQSLOD=4.9623;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,19:25:60.14:834,60,0	1/1:0,2:2:6.02:90,6,0	0/0:23,0:23:57.29:0,57,835	0/0:19,0:17:42.14:0,42,542	0/0:13,0:13:18.06:0,18,234	1/1:7,13:20:45.11:647,45,0	1/1:1,12:13:33.11:494,33,0	1/1:3,14:17:48.11:678,48,0	1/1:3,12:15:42.13:610,42,0	0/0:17,0:16:39.13:0,39,506	0/0:12,0:12:21.07:0,21,273	1/1:3,17:20:57.15:826,57,0	1/1:1,15:16:48.16:716,48,0	0/0:19,0:19:51.16:0,51,657	1/1:2,14:16:48.15:698,48,0	0/0:18,0:18:54.18:0,54,701	0/0:34,0:34:99:0,99,1253	0/0:12,0:12:27.09:0,27,351	0/0:18,0:17:45.15:0,45,579	0/0:13,0:13:30.10:0,30,386	0/0:20,0:20:54.18:0,54,701	1/1:1,8:9:21.07:314,21,0	1/1:3,12:15:30.10:448,30,0	1/1:2,21:23:60.20:897,60,0	0/0:13,0:13:36.11:0,36,458	0/0:19,0:19:51.17:0,51,661	0/0:21,0:21:48.14:0,48,608	0/0:8,0:8:21.07:0,21,271
chr10	46316374	.	ACT	A	1087.82	PASS	AB=0.971;AC=15;AF=0.268;AN=56;BaseQRankSum=-4.957;DP=467;FS=6.905;HRun=0;HaplotypeScore=113.1899;InbreedingCoeff=0.3296;MQ=71.61;MQ0=0;MQRankSum=2.929;QD=5.36;ReadPosRankSum=5.891;VQSLOD=2.0569;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:56.19:0,56,336	0/0:1,0:1:2.99:0,3,24	0/0:17,0:17:41.26:0,41,557	0/0:14,0:12:34.16:0,34,385	1/1:17,1:18:31.68:147,32,0	0/0:19,0:19:50.86:0,51,303	0/0:13,0:13:18.99:0,19,165	0/1:18,1:18:59.90:60,0,205	0/0:15,0:15:12.40:0,12,194	0/1:18,1:19:42.19:83,0,42	0/1:14,0:14:7.76:120,0,8	0/0:17,0:18:42.64:0,43,230	0/0:18,0:18:48.49:0,48,314	0/1:21,1:22:58.28:127,0,58	0/0:15,0:15:22.88:0,23,248	1/1:15,1:16:35.57:130,36,0	1/1:37,0:37:7.67:221,8,0	1/1:14,0:14:24.16:98,24,0	0/0:22,0:21:48.43:0,48,343	0/0:10,0:10:25.23:0,25,171	0/0:21,0:21:48.32:0,48,344	0/0:10,0:10:9.32:0,9,113	0/0:11,0:11:25.75:0,26,141	0/0:20,0:20:29.54:0,30,268	0/1:15,1:16:25.48:108,0,25	0/1:20,0:20:47.45:135,0,47	0/0:18,0:18:41.01:0,41,261	0/1:8,0:8:31.08:36,0,31
chr10	46316376	.	TCC	T	4559.57	PASS	AB=0.732;AC=27;AF=0.500;AN=54;BaseQRankSum=-12.270;DP=462;FS=0.856;HRun=11;HaplotypeScore=100.4710;InbreedingCoeff=0.6348;MQ=72.62;MQ0=0;MQRankSum=3.038;QD=17.21;ReadPosRankSum=2.906;VQSLOD=3.9485;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:21:34.62:0,35,135	./.	0/0:20,0:20:27.08:0,27,372	0/1:15,0:13:1.39:1,0,265	1/1:3,15:18:35.75:361,36,0	0/0:4,0:18:40.18:0,40,153	0/1:4,1:12:11.43:11,0,40	1/1:12,7:18:27:281,27,0	0/1:5,1:13:5.29:5,0,84	1/1:5,14:19:45.07:472,45,0	1/1:2,10:12:27.05:279,27,0	0/0:5,0:17:30.93:0,31,107	0/0:7,0:20:40.14:0,40,221	1/1:5,14:19:36.06:382,36,0	0/1:10,1:16:3.68:4,0,87	1/1:1,16:17:45.11:479,45,0	1/1:3,33:37:92.96:970,93,0	1/1:0,14:14:30.07:319,30,0	0/0:10,1:20:4.99:0,5,126	0/0:4,0:9:7.49:0,7,26	0/0:13,1:21:20.64:0,21,86	0/1:6,1:10:13.21:26,0,13	0/0:4,0:11:12.48:0,12,43	0/0:10,1:21:0.26:0,0,96	1/1:5,11:16:36.04:371,36,0	1/1:3,17:20:42.03:439,42,0	0/0:4,0:18:17.86:0,18,120	1/1:2,6:8:15.03:160,15,0
chr10	46317591	.	A	ACC	1246.70	PASS	AB=1.000;AC=25;AF=0.446;AN=56;BaseQRankSum=-3.875;DP=402;FS=8.443;HRun=5;HaplotypeScore=58.2211;InbreedingCoeff=0.7565;MQ=88.24;MQ0=0;MQRankSum=-1.090;QD=15.20;ReadPosRankSum=-3.213;VQSLOD=-0.7360;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,5:13:3.01:52,3,0	1/1:0,1:1:3.01:52,3,0	0/0:15,0:15:19.85:0,20,217	0/0:27,0:27:33.61:0,34,525	0/0:17,0:17:44.50:0,45,541	1/1:5,0:5:3.01:52,3,0	1/1:6,0:6:17.99:239,18,0	1/1:7,8:15:21.05:308,21,0	1/1:0,2:2:3.01:51,3,0	0/0:30,0:30:84.26:0,84,1063	0/0:13,0:13:39.12:0,39,492	1/1:3,1:4:6.01:77,6,0	1/1:1,4:5:6.02:105,6,0	0/0:24,0:24:69.20:0,69,863	1/1:2,7:9:18.06:299,18,0	0/1:15,0:15:1.72:2,0,489	0/0:36,0:36:93.21:0,93,1129	0/0:12,0:12:33.06:0,33,391	0/0:9,0:9:27.05:0,27,306	0/0:18,0:18:48.15:0,48,609	0/0:35,0:35:90.27:0,90,1132	1/1:0,4:4:3.01:52,3,0	1/1:0,1:1:3.01:52,3,0	1/1:2,0:2:6.02:96,6,0	0/0:21,0:21:63.19:0,63,777	0/0:29,0:29:81.26:0,81,1030	0/0:21,0:21:51.14:0,51,633	0/0:13,0:13:36.11:0,36,455
chr10	46318944	.	CT	C	13335.42	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=13.681;DP=643;FS=4.121;HRun=2;HaplotypeScore=78.1470;InbreedingCoeff=0.9977;MQ=94.83;MQ0=0;MQRankSum=-3.330;QD=34.73;ReadPosRankSum=4.377;VQSLOD=5.3516;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,35:35:84.27:1090,84,0	1/1:0,8:8:18.53:234,19,0	0/0:34,0:34:89.17:0,89,1268	0/0:24,0:24:66.18:0,66,943	0/0:20,0:20:57.18:0,57,834	1/1:0,13:13:39.13:506,39,0	1/1:0,36:36:96.31:1246,96,0	1/1:1,26:27:78.24:998,78,0	1/1:0,27:27:72.17:932,72,0	0/0:20,0:20:57.19:0,57,854	0/0:13,0:13:33.10:0,33,472	1/1:0,22:22:54.14:700,54,0	1/1:0,22:22:57.19:740,57,0	0/0:27,0:27:78.25:0,78,1150	1/1:2,30:32:84.22:1070,84,0	0/0:34,0:33:99:0,102,1511	0/0:30,0:30:90.30:0,90,1342	0/0:19,0:19:57.13:0,57,806	1/1:1,18:19:51.14:645,51,0	1/1:1,12:13:30.10:389,30,0	1/1:0,30:30:78.25:1011,78,0	1/1:0,22:22:63.20:814,63,0	1/1:1,19:20:54.18:701,54,0	1/1:0,26:26:78.25:1012,78,0	0/0:14,0:14:42.14:0,42,630	0/0:18,0:18:48.16:0,48,719	1/1:0,32:32:96.31:1245,96,0	0/0:6,0:6:18.06:0,18,270
chr10	46320850	.	A	ACTGGGAAAGCC	44280.89	PASS	AB=0.627;AC=31;AF=0.554;AN=56;BaseQRankSum=-0.224;DP=713;FS=3.934;HRun=0;HaplotypeScore=220.4850;InbreedingCoeff=0.9130;MQ=79.33;MQ0=0;MQRankSum=-20.053;QD=103.22;ReadPosRankSum=-6.565;VQSLOD=3.4005;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:17,12:36:57.15:2208,57,0	1/1:5,5:10:30.10:1629,30,0	0/0:25,0:25:56.33:0,56,1415	0/0:29,0:29:66.20:0,66,1914	0/0:23,0:23:63.22:0,63,2051	1/1:11,10:22:60.21:2680,60,0	1/1:13,11:29:69.24:3238,69,0	1/1:18,10:31:81.13:3748,81,0	0/1:15,19:37:99:4669,0,109	0/0:30,0:30:81.28:0,81,2714	0/0:12,0:12:33.11:0,33,1055	1/1:10,10:23:45.15:2242,45,0	1/1:7,18:28:75.07:4079,75,0	0/0:34,0:34:93.31:0,93,3139	1/1:14,15:31:81.28:3826,81,0	0/0:22,0:22:60.21:0,60,2011	0/0:34,0:34:93.24:0,93,2974	0/0:20,0:20:60.16:0,60,1819	1/1:12,5:17:36.12:1730,36,0	1/1:14,10:25:72.24:2109,72,0	1/1:22,9:35:75.24:2569,75,0	1/1:7,19:27:72.24:2342,72,0	1/1:8,10:21:48.16:1507,48,0	1/1:12,11:26:47.22:1612,47,0	0/0:13,0:12:30.10:0,30,987	0/0:40,0:40:99:0,111,3462	1/1:14,16:31:87.30:4093,87,0	0/0:2,0:2:6.02:0,6,205
chr10	46321399	.	AT	A	307.19	PASS	AB=1.000;AC=3;AF=0.060;AN=50;BaseQRankSum=1.154;DP=238;FS=0.000;HRun=7;HaplotypeScore=34.2985;InbreedingCoeff=0.3955;MQ=78.15;MQ0=5;MQRankSum=-2.044;QD=8.53;ReadPosRankSum=-2.994;VQSLOD=-0.7041;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:8:24.08:0,24,300	0/0:6,0:6:18.06:0,18,226	0/1:18,0:7:0.04:0,0,42	0/0:33,0:15:19.17:0,19,140	0/0:7,0:7:15.05:0,15,188	0/0:4,0:4:12.03:0,12,138	./.	1/1:9,9:18:41.71:400,42,0	0/0:1,0:1:3.01:0,3,38	0/0:5,0:5:9.03:0,9,113	0/0:6,0:6:12.04:0,12,150	0/0:3,0:3:6.02:0,6,75	0/0:3,0:3:9.03:0,9,113	0/0:5,0:5:6.02:0,6,75	0/0:5,0:5:15.05:0,15,185	0/0:5,0:5:12.04:0,12,151	0/0:31,0:31:78.25:0,78,975	0/0:21,0:20:48.59:0,49,587	0/0:11,0:11:24.08:0,24,302	0/0:4,0:4:6.01:0,6,62	0/0:4,0:4:9.03:0,9,112	./.	0/0:1,0:1:3.01:0,3,38	./.	0/0:8,0:8:21.07:0,21,264	0/0:11,0:11:21.07:0,21,262	0/0:6,0:6:12.04:0,12,145	0/0:12,0:12:30.10:0,30,377
chr10	46321412	.	T	TA	112.04	PASS	AC=2;AF=0.042;AN=48;BaseQRankSum=4.091;DP=169;FS=7.599;HRun=0;HaplotypeScore=28.0828;InbreedingCoeff=0.3231;MQ=70.38;MQ0=5;MQRankSum=-2.666;QD=10.19;ReadPosRankSum=-2.649;VQSLOD=1.8960;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:5:15.04:0,15,193	0/0:5,0:5:14.96:0,15,182	0/0:18,0:4:10.56:0,11,86	0/0:23,0:8:7.64:0,8,115	0/0:4,0:4:12.03:0,12,150	0/0:3,0:3:9.02:0,9,110	./.	1/1:6,5:11:10.45:195,10,0	0/0:1,0:1:3.01:0,3,42	0/0:3,0:3:9.03:0,9,126	0/0:2,0:2:6.01:0,6,69	0/0:1,0:1:2.94:0,3,18	0/0:2,0:2:6.02:0,6,84	0/0:2,0:2:6.02:0,6,84	0/0:4,0:4:11.95:0,12,139	0/0:4,0:4:12.04:0,12,168	0/0:28,0:28:81.22:0,81,1088	0/0:18,0:17:51.09:0,51,653	0/0:8,0:8:24.07:0,24,319	./.	0/0:1,0:1:3.01:0,3,41	./.	0/0:1,0:1:3.01:0,3,42	./.	0/0:5,0:5:12.04:0,12,167	0/0:6,0:6:18.06:0,18,252	0/0:3,0:3:8.94:0,9,67	0/0:11,0:11:30.10:0,30,419
chr10	46321432	.	TA	T	203.29	PASS	AC=6;AF=0.188;AN=32;BaseQRankSum=4.129;DP=134;FS=5.381;HRun=1;HaplotypeScore=31.2386;InbreedingCoeff=0.5128;MQ=63.00;MQ0=5;MQRankSum=-3.833;QD=13.55;ReadPosRankSum=-1.493;VQSLOD=1.9352;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:3,1:3:8.96:0,9,69	./.	./.	0/0:18,2:7:6.01:0,6,68	./.	1/1:0,2:2:6.02:81,6,0	1/1:0,2:2:5.99:63,6,0	1/1:9,2:10:0.89:160,1,0	./.	0/0:1,0:1:3:0,3,28	./.	./.	./.	0/0:2,0:2:6.02:0,6,92	0/0:2,0:2:3.78:0,4,11	0/0:3,0:3:9.03:0,9,138	0/0:33,0:33:90.22:0,90,1260	0/0:14,0:14:42.14:0,42,635	0/0:7,0:6:18.06:0,18,271	./.	0/0:1,0:1:3.01:0,3,45	./.	./.	./.	0/0:5,0:5:12.04:0,12,183	0/0:2,0:2:6.01:0,6,73	./.	0/0:12,0:11:30.10:0,30,452
chr10	46321456	.	A	AT	1507.64	PASS	AB=1.000;AC=25;AF=0.893;AN=28;BaseQRankSum=-1.033;DP=118;FS=3.074;HRun=10;HaplotypeScore=25.9063;InbreedingCoeff=0.2677;MQ=49.58;MQ0=6;MQRankSum=1.316;QD=15.08;ReadPosRankSum=1.681;VQSLOD=2.8429;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	./.	1/1:1,0:1:2.84:14,3,0	1/1:2,0:2:5.68:29,6,0	1/1:15,0:17:14.43:70,14,0	./.	./.	./.	0/0:0,0:1:2.04:0,2,6	./.	0/1:2,0:2:0:0,0,0	./.	1/1:1,2:3:6.02:64,6,0	1/1:5,29:35:76:848,76,0	1/1:6,6:12:24:235,24,0	1/1:3,6:7:15.04:160,15,0	./.	./.	./.	./.	1/1:1,0:1:2.22:7,2,0	1/1:1,4:4:6.02:64,6,0	1/1:1,0:1:3.01:32,3,0	1/1:0,1:1:3.01:32,3,0	1/1:8,1:8:3.01:32,3,0
chr10	46321552	.	T	TTTTA	2791.12	PASS	AC=18;AF=0.818;AN=22;BaseQRankSum=-3.518;DP=120;FS=0.000;HRun=0;HaplotypeScore=31.2624;InbreedingCoeff=0.4358;MQ=80.70;MQ0=3;MQRankSum=-1.503;QD=39.31;ReadPosRankSum=2.064;VQSLOD=3.4549;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:15,0:8:1.96:0,2,65	0/0:15,0:5:3.55:0,4,45	./.	./.	1/1:1,1:2:3.01:74,3,0	1/1:6,0:5:6.02:110,6,0	./.	./.	./.	./.	./.	1/1:0,1:1:3.01:74,3,0	./.	./.	1/1:7,14:21:45.15:1081,45,0	1/1:7,13:21:21.31:588,21,0	1/1:6,5:10:21.07:454,21,0	./.	1/1:1,2:4:8.95:165,9,0	./.	./.	./.	1/1:1,0:1:3.01:41,3,0	./.	1/1:0,4:4:12.04:295,12,0	./.
chr10	46323583	.	G	GA	504.06	PASS	AB=0.923;AC=5;AF=0.089;AN=56;BaseQRankSum=2.116;DP=282;FS=5.787;HRun=10;HaplotypeScore=43.0410;InbreedingCoeff=0.5667;MQ=58.83;MQ0=3;MQRankSum=-1.597;QD=12.92;ReadPosRankSum=-0.643;VQSLOD=2.6420;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:40.76:0,41,324	0/0:0,0:1:2.04:0,2,6	0/0:10,0:9:8.08:0,8,110	0/0:7,0:4:5.55:0,6,44	0/0:11,0:12:22.99:0,23,178	1/1:4,11:15:14.42:341,14,0	1/1:5,7:12:27.05:278,27,0	0/0:23,1:23:24.92:0,25,411	0/0:6,0:6:14.97:0,15,122	0/0:8,0:8:17.97:0,18,148	0/1:11,1:12:2:2,0,189	0/0:7,0:7:20.97:0,21,172	0/0:5,0:5:11.97:0,12,99	0/0:9,0:9:26.97:0,27,221	0/0:1,0:17:32.59:0,33,94	0/0:8,0:8:23.97:0,24,197	0/0:13,0:13:38.95:0,39,320	0/0:10,0:10:26.96:0,27,221	0/0:16,0:14:1.32:0,1,215	0/0:10,1:11:0.37:0,0,195	0/0:9,0:9:17.92:0,18,144	0/0:4,0:4:11.99:0,12,98	0/0:4,0:4:8.99:0,9,74	0/0:10,0:10:23.97:0,24,197	0/0:10,0:10:29.96:0,30,246	0/0:10,0:10:26.96:0,27,222	0/0:7,0:7:17.94:0,18,144	0/0:8,0:8:23.97:0,24,197
chr10	46324071	.	GGTTT	G	11166.99	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-1.338;DP=803;FS=1.513;HRun=0;HaplotypeScore=173.9603;InbreedingCoeff=0.9984;MQ=63.75;MQ0=8;MQRankSum=7.168;QD=25.91;ReadPosRankSum=4.176;VQSLOD=4.8795;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:34:71.20:0,71,1153	0/0:13,0:13:24.08:0,24,539	0/0:30,0:24:20.82:0,21,440	0/0:26,0:24:27.06:0,27,582	1/1:14,37:50:99:1590,99,0	0/0:21,0:21:54.19:0,54,1282	0/0:29,0:29:54.17:0,54,1254	1/1:28,0:44:36.66:270,37,0	0/0:13,0:29:45.15:0,45,755	1/1:8,16:24:48.16:772,48,0	1/1:4,14:18:39.13:623,39,0	0/0:14,0:31:60.20:0,60,1066	0/0:7,0:27:45.15:0,45,767	1/1:9,13:22:27.09:435,27,0	0/0:34,0:34:78.27:0,78,1877	1/1:6,24:29:57.19:918,57,0	1/1:11,23:34:63.21:1014,63,0	1/1:9,12:20:27.09:435,27,0	1/1:16,10:26:30.08:451,30,0	1/1:9,24:33:74.92:1168,75,0	1/1:14,16:29:36.12:580,36,0	0/0:15,0:30:54.11:0,54,906	0/0:10,0:27:45.12:0,45,698	0/0:22,0:39:48.11:0,48,709	1/1:8,15:23:33.11:531,33,0	1/1:12,25:37:75.23:1172,75,0	1/1:7,19:26:48.16:773,48,0	1/1:3,9:12:27.09:435,27,0
chr10	46325583	.	AAAAAC	A	7483.65	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=7.356;DP=714;FS=0.000;HRun=0;HaplotypeScore=151.1629;InbreedingCoeff=0.9982;MQ=58.18;MQ0=2;MQRankSum=-1.209;QD=32.97;ReadPosRankSum=3.732;VQSLOD=4.8280;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,29:35:87.29:1619,87,0	1/1:1,10:11:30.10:559,30,0	0/0:10,0:10:19.31:0,19,463	0/0:29,0:20:23.29:0,23,481	0/0:28,0:28:63.20:0,63,1744	0/0:7,0:19:33.11:0,33,698	0/0:13,0:25:36.12:0,36,838	0/0:33,0:31:57.19:0,57,1350	1/1:12,10:22:30.10:559,30,0	0/0:25,0:25:60.21:0,60,1648	0/0:18,0:18:36.12:0,36,1032	1/1:6,17:23:48.16:895,48,0	1/1:9,14:23:33.11:615,33,0	0/0:24,0:24:51.18:0,51,1460	1/1:13,24:36:57.19:1045,57,0	0/0:33,0:33:69.20:0,69,1911	0/0:41,0:41:99:0,99,2792	0/0:25,0:25:54.16:0,54,1470	0/0:14,0:24:48.16:0,48,1155	0/0:11,0:30:69.24:0,69,1531	0/0:6,0:25:49.40:0,49,1026	1/1:5,14:19:32.95:577,33,0	1/1:5,13:18:32.23:611,32,0	1/1:11,28:39:54.19:1003,54,0	0/0:24,0:24:57.20:0,57,1630	0/0:27,0:27:57.20:0,57,1625	0/0:14,0:34:78.23:0,78,1647	0/0:13,0:13:30.10:0,30,860
chr10	46325754	.	C	CAGTAATTA	62765.04	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-7.678;DP=683;FS=0.000;HRun=0;HaplotypeScore=160.1108;InbreedingCoeff=0.9965;MQ=70.51;MQ0=0;MQRankSum=-10.307;QD=98.07;ReadPosRankSum=3.530;VQSLOD=5.4206;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,17:34:78.27:3068,78,0	1/1:4,8:14:36.12:1436,36,0	0/0:25,0:25:63.06:0,63,1647	0/0:17,0:18:48.92:0,49,1253	1/1:7,20:28:69.24:2600,69,0	1/1:2,15:20:54.19:2276,54,0	1/1:8,18:28:66.23:2850,66,0	1/1:14,7:25:72.15:2182,72,0	1/1:3,18:24:57.20:2468,57,0	1/1:14,14:32:91.18:3762,91,0	1/1:7,12:19:48.08:1574,48,0	1/1:12,16:28:75.15:2738,75,0	1/1:5,13:21:54.19:2249,54,0	1/1:1,13:18:42.14:1864,42,0	1/1:11,27:41:99:4387,105,0	1/1:6,20:28:72.25:3043,72,0	1/1:5,15:27:51.18:1953,51,0	1/1:1,8:9:24.08:1071,24,0	1/1:6,8:16:45.10:1738,45,0	1/1:6,18:28:75.20:2680,75,0	1/1:12,7:21:30.10:1133,30,0	1/1:8,13:22:60.21:2263,60,0	1/1:8,17:27:75.17:2720,75,0	1/1:10,15:27:48.16:1751,48,0	1/1:6,17:24:63.17:2450,63,0	1/1:7,27:36:99:4118,102,0	1/1:7,22:34:84.29:3559,84,0	1/1:4,3:7:21.07:832,21,0
chr10	46326316	.	C	CA	1149.43	PASS	AB=0.767;AC=14;AF=0.438;AN=32;BaseQRankSum=-0.716;DP=235;FS=17.231;HRun=15;HaplotypeScore=60.9087;InbreedingCoeff=-0.0136;MQ=62.81;MQ0=11;MQRankSum=0.206;QD=6.57;ReadPosRankSum=-0.815;VQSLOD=0.6803;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/1:5,0:5:11.75:17,0,12	0/0:8,0:6:3.68:0,4,19	0/1:5,4:9:0.09:97,0,0	./.	./.	./.	./.	1/1:8,8:16:11.81:198,12,0	0/1:8,6:16:36.29:144,0,36	./.	./.	0/0:6,0:6:1.82:0,2,16	./.	1/1:5,5:9:2.34:116,2,0	0/1:13,17:32:15.45:186,0,15	1/1:8,11:18:32.81:261,33,0	0/0:19,0:19:29.94:0,30,170	0/0:12,0:12:19.52:0,20,113	0/1:16,1:18:1.50:1,0,117	./.	./.	./.	0/1:11,6:18:9.52:113,0,10	0/1:11,7:18:12.21:117,0,12	0/0:10,0:9:6.82:0,7,38	0/1:5,0:7:12.69:18,0,13
chr10	46326485	.	GA	G	3664.39	PASS	AB=0.964;AC=33;AF=0.589;AN=56;BaseQRankSum=5.894;DP=373;FS=14.380;HRun=11;HaplotypeScore=44.7419;InbreedingCoeff=0.8733;MQ=74.78;MQ0=0;MQRankSum=0.823;QD=16.51;ReadPosRankSum=0.618;VQSLOD=2.9503;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,24:30:47.92:394,48,0	1/1:1,2:3:5.99:49,6,0	0/0:27,0:17:7.38:0,7,161	0/1:25,1:15:12.15:12,0,89	0/0:15,0:15:33.08:0,33,352	1/1:1,9:10:26.97:222,27,0	1/1:0,14:14:35.96:296,36,0	1/1:1,11:12:32.96:271,33,0	1/1:0,6:6:14.98:123,15,0	0/0:22,1:24:41.31:0,41,600	0/0:6,0:6:15.04:0,15,160	1/1:2,11:13:32.94:270,33,0	1/1:1,14:16:38:301,38,0	0/0:5,0:7:20.72:0,21,188	1/1:4,19:23:51.81:420,52,0	0/0:11,0:12:32.91:0,33,327	0/0:12,0:12:30.07:0,30,317	0/0:7,1:9:8.37:0,8,220	1/1:2,10:13:31.97:247,32,0	1/1:1,9:10:20.94:172,21,0	1/1:0,12:12:29.97:246,30,0	1/1:1,4:5:8.98:74,9,0	1/1:0,5:5:11.98:99,12,0	1/1:0,7:7:17.98:148,18,0	0/0:12,0:13:35.76:0,36,331	0/0:14,0:14:18.42:0,18,328	1/1:0,16:16:38.96:320,39,0	0/0:12,0:12:20.85:0,21,189
chr10	46327220	.	G	GA	10974.55	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-16.352;DP=716;FS=19.103;HRun=4;HaplotypeScore=66.6143;InbreedingCoeff=0.9995;MQ=74.04;MQ0=0;MQRankSum=0.552;QD=37.58;ReadPosRankSum=2.963;VQSLOD=2.9469;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,36:38:99:1435,102,0	1/1:2,16:18:48.16:690,48,0	0/0:32,0:28:71.46:0,71,835	0/0:34,0:21:24.82:0,25,582	0/0:25,0:25:75.24:0,75,929	1/1:3,25:28:72.24:1037,72,0	1/1:1,12:13:27.09:389,27,0	1/1:3,40:43:99:1646,112,0	1/1:0,34:34:96.32:1381,96,0	0/0:34,0:34:99:0,99,1216	0/0:21,0:21:63.19:0,63,770	1/1:2,19:21:48.16:691,48,0	1/1:2,17:19:45.15:648,45,0	0/0:32,1:33:50.07:0,50,1072	1/1:0,22:22:63.21:907,63,0	0/0:18,0:18:54.17:0,54,669	0/0:31,0:31:90.28:0,90,1115	0/0:28,0:28:82.42:0,82,973	0/0:21,0:21:60.17:0,60,718	0/0:18,0:18:48.04:0,48,569	0/0:18,0:18:51.09:0,51,612	1/1:3,22:25:66.22:941,66,0	1/1:0,11:11:27.09:389,27,0	1/1:1,19:20:57.19:821,57,0	0/0:18,0:18:51.16:0,51,632	0/0:36,0:36:96.30:0,96,1188	0/0:35,0:35:99:0,99,1209	0/0:21,0:21:57.18:0,57,703
chr10	46328208	.	C	CT	8092.25	PASS	AB=0.817;AC=51;AF=0.944;AN=54;BaseQRankSum=-3.179;DP=277;FS=9.293;HRun=3;HaplotypeScore=40.3410;InbreedingCoeff=-0.0752;MQ=69.21;MQ0=10;MQRankSum=0.468;QD=29.21;ReadPosRankSum=2.824;VQSLOD=3.2782;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,3:9:11.33:142,11,0	1/1:0,2:2:6.02:86,6,0	0/1:17,3:7:31.32:153,0,31	0/1:13,5:14:30.29:217,0,30	1/1:4,3:6:8.23:113,8,0	./.	1/1:0,8:7:21.07:313,21,0	1/1:6,20:25:63.16:903,63,0	1/1:0,9:9:27.09:388,27,0	1/1:2,11:13:36.09:504,36,0	1/1:0,6:6:18.06:263,18,0	1/1:2,4:6:6.96:83,7,0	1/1:2,7:9:20.28:307,20,0	1/1:1,5:6:15.05:216,15,0	1/1:1,10:11:27.56:396,28,0	1/1:5,4:9:14.69:208,15,0	1/1:0,7:7:15.05:220,15,0	1/1:0,7:7:21.07:306,21,0	1/1:2,10:11:10.87:378,11,0	1/1:1,9:10:24.08:359,24,0	1/1:0,6:6:6.02:86,6,0	1/1:2,3:5:9.50:136,10,0	1/1:3,7:8:18.06:261,18,0	1/1:3,7:9:21.54:307,22,0	1/1:0,15:15:42.14:624,42,0	1/1:5,12:16:39.13:564,39,0	0/1:6,2:8:3.09:118,0,3	1/1:1,10:11:30.10:443,30,0
chr10	46328319	.	C	CA	3712.44	PASS	AC=46;AF=0.958;AN=48;BaseQRankSum=-1.379;DP=167;FS=7.721;HRun=1;HaplotypeScore=38.7278;InbreedingCoeff=0.2505;MQ=37.05;MQ0=10;MQRankSum=-0.040;QD=24.92;ReadPosRankSum=1.004;VQSLOD=2.9381;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	1/1:0,2:2:5.98:64,6,0	0/0:4,0:2:6:0,6,52	./.	1/1:0,11:11:18.02:242,18,0	1/1:2,4:4:6.02:89,6,0	1/1:0,6:6:12.04:178,12,0	1/1:2,9:10:26.94:305,27,0	1/1:0,2:2:3.01:45,3,0	1/1:0,11:11:24.08:350,24,0	1/1:0,9:9:15:197,15,0	1/1:0,3:3:6.02:89,6,0	1/1:0,9:8:21.07:307,21,0	1/1:0,4:4:3.01:44,3,0	1/1:0,4:4:6.02:87,6,0	1/1:0,4:4:9:109,9,0	1/1:0,5:4:11.90:125,12,0	./.	1/1:1,6:6:18.06:262,18,0	1/1:1,7:8:5.78:89,6,0	./.	1/1:1,3:4:8.96:107,9,0	1/1:2,8:9:6.02:89,6,0	1/1:0,2:2:3.01:44,3,0	1/1:0,15:14:18.06:267,18,0	1/1:0,11:11:30.10:445,30,0	1/1:0,1:1:3.01:44,3,0	1/1:0,4:4:9.03:134,9,0
chr10	46331011	.	C	CT	18205.57	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=-17.399;DP=731;FS=2.695;HRun=1;HaplotypeScore=66.7006;InbreedingCoeff=0.9988;MQ=73.93;MQ0=1;MQRankSum=-4.448;QD=43.76;ReadPosRankSum=0.689;VQSLOD=4.8077;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,59:59:99:2542,160,0	1/1:0,13:13:33.11:528,33,0	0/0:21,0:21:30.01:0,30,726	0/0:29,0:30:76.42:0,76,952	0/0:30,0:30:90.30:0,90,1258	1/1:0,14:14:42.14:672,42,0	1/1:1,26:27:63.21:1007,63,0	1/1:1,37:38:99:1706,111,0	1/1:0,19:19:54.18:863,54,0	0/0:29,0:29:84.20:0,84,1115	0/0:21,0:21:54.17:0,54,738	1/1:0,25:25:69.24:1103,69,0	1/1:0,26:26:78.27:1246,78,0	0/0:26,0:26:78.26:0,78,1089	1/1:0,20:20:57.19:911,57,0	0/0:24,0:24:69.23:0,69,962	0/0:42,0:42:99:0,123,1672	0/0:37,0:37:99:0,108,1509	1/1:0,16:16:48.15:721,48,0	1/1:0,19:18:51.17:815,51,0	1/1:1,42:43:99:1775,111,0	1/1:1,24:24:66.23:1055,66,0	1/1:0,31:31:90.31:1438,90,0	1/1:0,21:21:60.20:959,60,0	0/0:21,0:21:63.21:0,63,881	0/0:28,0:28:81.20:0,81,1075	1/1:0,19:19:54.18:863,54,0	0/0:6,0:6:18.03:0,18,231
chr10	46335714	.	G	GGTCT	14739.67	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=17.310;DP=603;FS=5.712;HRun=0;HaplotypeScore=122.9433;InbreedingCoeff=0.9970;MQ=72.05;MQ0=0;MQRankSum=-18.036;QD=66.10;ReadPosRankSum=4.116;VQSLOD=7.0914;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,26:29:69.24:1870,69,0	1/1:0,5:5:15.05:413,15,0	0/0:12,0:12:32.89:0,33,588	0/0:13,0:13:33.43:0,33,556	0/0:28,0:28:84.29:0,84,1746	1/1:0,20:23:57.20:1552,57,0	1/1:1,19:22:54.19:1473,54,0	1/1:0,19:21:63.19:1593,63,0	1/1:0,19:21:54.19:1470,54,0	0/0:28,0:28:84.27:0,84,1680	0/0:11,0:11:33.11:0,33,692	1/1:0,22:24:63.22:1738,63,0	1/1:0,9:10:27.09:735,27,0	0/0:25,0:25:72.25:0,72,1473	1/1:0,21:23:57.20:1568,57,0	0/0:35,0:35:99:0,102,2084	0/0:22,0:22:66.21:0,66,1331	0/0:13,0:13:39.13:0,39,818	0/0:32,0:32:93.31:0,93,1847	0/0:23,0:23:66.23:0,66,1355	0/0:39,0:39:99:0,114,2350	1/1:2,10:15:27.09:736,27,0	1/1:0,15:17:39.13:1026,39,0	1/1:2,11:13:23.36:566,23,0	0/0:15,0:15:45.15:0,45,944	0/0:36,0:36:99:0,108,2211	0/0:37,0:37:99:0,111,2272	0/0:11,0:11:33.11:0,33,692
chr10	46335931	.	C	CA	1490.12	PASS	AB=0.920;AC=36;AF=0.643;AN=56;BaseQRankSum=5.208;DP=482;FS=7.586;HRun=12;HaplotypeScore=67.8923;InbreedingCoeff=0.3821;MQ=52.54;MQ0=23;MQRankSum=-5.028;QD=4.64;ReadPosRankSum=-0.624;VQSLOD=1.1321;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:12,0:22:31.50:166,32,0	1/1:5,0:6:2.22:7,2,0	0/1:17,0:9:3.73:34,0,4	0/0:19,0:5:3.64:0,4,16	0/0:32,1:33:21.65:0,22,333	1/1:3,0:14:5.68:29,6,0	1/1:4,0:11:5.83:37,6,0	1/1:10,0:25:26.71:142,27,0	1/1:6,1:9:11.99:92,12,0	0/0:14,0:12:17.77:0,18,128	0/1:13,2:14:30.54:31,0,126	1/1:10,0:10:8.30:52,8,0	1/1:2,0:11:11.36:57,11,0	0/1:12,1:13:23.06:23,0,109	1/1:2,0:15:11.35:56,11,0	0/0:16,0:17:4.05:0,4,150	0/0:35,0:35:65.57:0,66,435	0/0:25,0:24:6.04:0,6,218	1/1:9,10:18:27.04:259,27,0	1/1:6,8:13:5.17:183,5,0	0/1:8,3:10:4.80:128,0,5	1/1:12,0:16:19.07:91,19,0	1/1:7,0:9:8.99:44,9,0	1/1:12,0:14:11.52:58,12,0	0/1:14,1:15:21.72:22,0,126	0/1:25,1:26:4.47:4,0,296	1/1:9,4:13:0.71:152,1,0	0/0:16,0:12:7.58:0,8,48
chr10	46338521	.	CT	C	530.54	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.868;DP=678;FS=1.421;HRun=9;HaplotypeScore=77.0503;InbreedingCoeff=0.9501;MQ=67.12;MQ0=5;MQRankSum=0.635;QD=15.60;ReadPosRankSum=-1.727;VQSLOD=3.6213;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,1:41:70.19:0,70,1081	0/0:9,0:9:27.07:0,27,301	0/0:41,1:21:12.08:0,12,323	0/0:38,0:24:18.64:0,19,291	0/0:31,2:33:35.92:0,36,906	0/0:20,0:20:54.09:0,54,606	0/0:22,0:22:63.07:0,63,685	1/1:9,24:34:54.49:625,54,0	0/0:20,0:20:54.09:0,54,606	0/0:30,0:30:78.20:0,78,871	0/0:13,0:13:36.04:0,36,381	0/0:17,1:18:20.68:0,21,491	0/0:17,0:17:41.90:0,42,423	0/0:16,0:16:48.13:0,48,543	0/0:33,0:33:90.21:0,90,1022	0/0:17,0:17:48.13:0,48,543	0/0:28,2:30:55.71:0,56,863	0/0:26,0:26:66.13:0,66,726	0/0:17,0:17:36.05:0,36,382	0/0:28,0:28:81.19:0,81,891	0/0:11,0:11:27.08:0,27,312	0/0:20,0:20:54.03:0,54,602	0/0:21,0:21:48.14:0,48,552	0/0:30,0:30:87.25:0,87,992	0/0:21,0:21:57.16:0,57,649	0/0:29,0:29:66.15:0,66,727	0/0:32,0:32:87.08:0,87,947	0/0:8,0:8:17.92:0,18,188
chr10	46338954	.	G	GCACACACACA	3974.15	PASS	AB=0.792;AC=30;AF=0.536;AN=56;BaseQRankSum=-4.529;DP=818;FS=4.188;HRun=0;HaplotypeScore=240.4237;InbreedingCoeff=0.6222;MQ=56.78;MQ0=21;MQRankSum=-7.173;QD=7.98;ReadPosRankSum=-6.585;VQSLOD=0.5754;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:23,1:42:2.97:86,3,0	1/1:8,0:8:5.99:135,6,0	0/1:54,0:23:28.82:29,0,157	0/0:58,0:23:12.11:0,12,263	0/0:14,0:24:33.07:0,33,613	1/1:7,3:24:9.03:407,9,0	1/1:22,1:23:19.28:447,19,0	1/1:28,0:30:15.01:576,15,0	1/1:19,9:36:2.76:150,3,0	0/0:17,0:28:48.47:0,48,963	0/0:7,0:12:15.05:0,15,349	1/1:12,12:35:15.05:590,15,0	1/1:6,8:27:23.26:691,23,0	0/0:14,0:26:43.39:0,43,978	1/1:24,0:25:5.99:49,6,0	0/0:11,0:26:51.09:0,51,986	0/0:12,0:37:72.14:0,72,1752	0/1:21,0:29:26.44:26,0,783	1/1:20,0:21:31.31:442,31,0	0/1:6,0:18:0.01:0,0,0	1/1:25,0:69:6.60:24,7,0	0/1:5,9:21:0:0,0,1	1/1:5,0:13:3.01:91,3,0	0/0:18,12:51:0.47:0,0,1	0/0:10,0:19:5.67:0,6,517	0/0:14,0:29:42.40:0,42,1229	1/1:2,0:18:8.76:230,9,0	0/0:6,0:10:12.04:0,12,230
chr10	46338978	.	AGAGTG	A	584.79	PASS	AB=0.890;AC=11;AF=0.196;AN=56;BaseQRankSum=2.332;DP=838;FS=30.127;HRun=0;HaplotypeScore=186.2427;InbreedingCoeff=-0.2506;MQ=47.31;MQ0=39;MQRankSum=-5.291;QD=1.83;ReadPosRankSum=-3.527;VQSLOD=-0.0388;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,2:32:15.52:0,16,479	0/1:4,5:9:49.99:50,0,161	0/1:95,2:16:18.95:19,0,651	0/0:94,1:29:76.91:0,77,1619	0/0:16,0:16:39.09:0,39,766	0/1:21,2:23:99:113,0,234	0/1:21,4:25:99:109,0,1194	0/1:27,4:31:99:155,0,1581	0/0:21,1:22:17.27:0,17,522	0/0:24,0:23:66.66:0,67,1542	0/0:10,0:10:24.08:0,24,590	0/0:30,0:30:45.15:0,45,1184	0/1:24,1:25:73.25:73,0,756	0/0:21,0:21:57.20:0,57,1354	0/1:15,8:22:18.30:18,0,87	0/0:27,0:27:69.22:0,69,1555	0/0:38,0:38:99:0,108,2382	0/1:31,0:30:10.61:11,0,1418	0/1:18,2:18:99:142,0,1106	0/0:13,0:13:5.72:0,6,192	0/0:69,0:68:63.22:0,63,1914	0/0:15,0:15:9.03:0,9,278	0/1:10,1:11:34.34:34,0,183	0/0:40,1:41:6.49:0,6,193	0/0:22,0:22:51.16:0,51,1192	0/0:32,0:32:42.86:0,43,2259	0/1:20,0:20:4.62:5,0,615	0/0:9,0:9:15.05:0,15,300
chr10	46339048	.	TAC	T	4904.08	PASS	AB=0.819;AC=27;AF=0.482;AN=56;BaseQRankSum=7.135;DP=859;FS=5.888;HRun=0;HaplotypeScore=134.3327;InbreedingCoeff=0.6098;MQ=56.11;MQ0=34;MQRankSum=2.731;QD=11.73;ReadPosRankSum=4.016;VQSLOD=4.3835;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:74.57:0,75,1039	1/1:9,4:13:15.01:181,15,0	0/1:89,1:25:23.52:24,0,324	0/0:96,0:21:3.17:0,3,113	1/1:3,9:12:18.04:208,18,0	0/0:14,0:14:24.08:0,24,376	0/0:33,0:33:60.15:0,60,858	1/1:29,1:30:3.43:341,3,0	0/0:19,0:19:26.16:0,26,604	1/1:8,25:32:75.18:864,75,0	1/1:4,10:14:15.05:185,15,0	0/0:31,0:30:60.18:0,60,931	0/0:15,0:15:33.04:0,33,454	1/1:4,20:25:45.14:552,45,0	1/1:19,9:27:4.90:69,5,0	0/1:7,19:26:13.29:336,0,13	1/1:5,24:29:50.63:626,51,0	1/1:12,12:23:16.49:349,16,0	0/1:13,0:13:12.24:12,0,284	0/0:19,0:19:44.10:0,44,640	0/0:79,1:78:40.59:0,41,1694	0/0:26,0:25:71.79:0,72,1043	0/1:20,1:21:19.48:19,0,628	0/0:42,0:42:74.33:0,74,1099	1/1:9,16:25:33.07:386,33,0	1/1:6,21:26:57.16:687,57,0	0/0:17,0:16:30.10:0,30,467	0/1:2,6:8:1.50:64,0,1
chr10	46339050	.	C	CACACACAT	441.48	PASS	AB=0.999;AC=11;AF=0.196;AN=56;BaseQRankSum=3.232;DP=883;FS=1.980;HRun=0;HaplotypeScore=228.9579;InbreedingCoeff=0.1795;MQ=59.27;MQ0=34;MQRankSum=-0.241;QD=1.55;ReadPosRankSum=-5.343;VQSLOD=1.1436;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:84.18:0,84,1745	1/1:13,0:13:20.14:154,20,0	0/0:94,0:31:4.56:0,5,613	0/1:98,0:23:38.99:39,0,146	0/0:13,0:13:18.06:0,18,318	0/0:14,0:14:27.08:0,27,636	0/0:33,0:33:62.65:0,63,1297	0/1:30,0:30:99:139,0,241	0/0:19,0:19:42.14:0,42,987	0/1:33,0:32:99:102,0,784	0/0:14,0:14:18.52:0,19,298	0/0:32,0:31:60.19:0,60,1483	0/0:15,0:15:39.01:0,39,763	0/0:27,0:27:54.11:0,54,856	1/1:14,16:36:4.43:110,4,0	0/0:27,0:27:39.09:0,39,642	0/0:30,0:30:54.63:0,55,919	0/1:24,0:23:25.02:25,0,542	0/1:13,0:13:3.21:3,0,596	0/0:19,0:19:51.11:0,51,1096	0/0:83,0:80:99:0,146,3213	0/0:28,0:27:78.22:0,78,1738	0/0:21,0:21:23.53:0,24,1073	0/0:42,0:42:81.68:0,82,1863	0/0:25,0:25:21.03:0,21,555	0/1:27,0:26:9.41:9,0,773	0/0:17,0:16:36.08:0,36,745	0/1:8,0:8:5.99:6,0,105
chr10	46339549	.	A	ACCAC	61.46	PASS	AB=1.000;AC=3;AF=0.056;AN=54;BaseQRankSum=-0.711;DP=393;FS=1.593;HRun=0;HaplotypeScore=74.7241;InbreedingCoeff=0.5851;MQ=68.69;MQ0=2;MQRankSum=0.295;QD=3.62;ReadPosRankSum=-1.720;VQSLOD=1.6313;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:69.17:0,69,1067	./.	0/0:15,0:10:24.02:0,24,250	0/0:20,0:20:40.56:0,41,484	0/0:9,0:9:21.02:0,21,281	0/0:12,0:12:36.07:0,36,481	0/0:25,0:25:75.16:0,75,1042	1/1:3,6:10:11.96:147,12,0	0/0:8,0:8:24.06:0,24,372	0/0:11,0:11:24.04:0,24,308	0/0:10,0:10:15.02:0,15,199	0/0:13,0:13:36.10:0,36,616	0/0:14,0:14:36.08:0,36,591	0/0:16,0:16:42.08:0,42,594	0/0:5,0:5:2.41:0,2,24	0/0:12,0:12:36.07:0,36,537	0/0:39,0:39:99:0,99,1601	0/0:33,0:33:67.20:0,67,1322	0/0:7,0:7:15.02:0,15,199	0/0:11,0:11:32.98:0,33,381	0/0:17,0:17:33.07:0,33,486	0/0:9,0:9:24.53:0,25,373	0/0:13,0:13:24.05:0,24,304	0/0:20,0:20:57.17:0,57,1010	0/0:8,0:8:24.02:0,24,251	0/0:16,0:16:39.08:0,39,514	0/1:7,0:7:2.94:3,0,239	0/0:6,0:6:15.04:0,15,202
chr10	46339610	.	G	GA	148.18	PASS	AB=0.633;AC=2;AF=0.036;AN=56;BaseQRankSum=5.254;DP=531;FS=9.395;HRun=7;HaplotypeScore=70.4737;InbreedingCoeff=0.0179;MQ=67.78;MQ0=6;MQRankSum=-0.443;QD=9.88;ReadPosRankSum=-0.091;VQSLOD=0.8542;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:93.14:0,93,896	0/1:3,3:6:43.45:54,0,43	0/0:32,1:18:27.61:0,28,308	0/0:34,0:25:22.59:0,23,214	0/0:17,0:17:36.05:0,36,348	0/0:9,0:9:18.02:0,18,174	0/0:15,0:15:39.06:0,39,376	0/0:19,0:17:11.56:0,12,34	0/0:16,0:16:45.03:0,45,421	0/0:18,0:18:51.08:0,51,492	0/0:18,0:18:45.03:0,45,421	0/0:20,0:20:57.09:0,57,550	0/0:8,0:8:21.03:0,21,203	0/0:19,0:19:51.08:0,51,492	0/1:3,6:9:11.90:183,0,12	0/0:11,0:11:30.05:0,30,289	0/0:33,0:33:90.14:0,90,869	0/0:45,0:45:99:0,126,1217	0/0:14,0:14:30.04:0,30,289	0/0:21,0:21:57.07:0,57,545	0/0:10,0:10:27.04:0,27,261	0/0:12,0:12:27.04:0,27,261	0/0:22,0:22:48.07:0,48,463	0/0:24,0:24:69.09:0,69,658	0/0:17,0:17:48.04:0,48,456	0/0:25,0:24:57.09:0,57,550	0/0:14,0:14:39.06:0,39,376	0/0:7,0:7:18.03:0,18,174
chr10	46339617	.	AG	A	508.59	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=5.061;DP=554;FS=16.111;HRun=1;HaplotypeScore=73.0151;InbreedingCoeff=0.7554;MQ=69.66;MQ0=8;MQRankSum=2.260;QD=14.96;ReadPosRankSum=-2.316;VQSLOD=1.6500;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,99,1258	0/1:6,0:6:20.96:21,0,37	0/0:37,2:19:40.65:0,41,460	0/0:42,2:30:37.84:0,38,426	0/0:17,0:17:45.12:0,45,580	0/0:12,0:12:36.02:0,36,384	0/0:15,0:15:45.09:0,45,536	1/1:3,15:18:43.62:505,44,0	0/0:18,0:18:54.05:0,54,645	0/0:20,0:20:60.17:0,60,739	0/0:16,0:16:45.06:0,45,567	0/0:20,0:20:60.18:0,60,778	0/0:7,0:7:21.07:0,21,279	0/0:18,0:18:54.08:0,54,673	1/1:10,0:10:10.03:107,10,0	0/0:12,0:12:33:0,33,386	0/0:35,0:35:99:0,99,1235	0/0:45,0:45:99:0,132,1697	0/0:14,0:14:42.07:0,42,475	0/0:21,0:21:63.19:0,63,820	0/0:12,0:12:27.05:0,27,342	0/0:13,0:13:38.66:0,39,427	0/0:17,0:17:50.53:0,51,642	0/0:28,0:28:84.09:0,84,1002	0/0:18,0:18:50.72:0,51,613	0/0:23,0:22:66.19:0,66,835	0/0:14,0:14:42.04:0,42,518	0/0:8,0:8:24.05:0,24,287
chr10	46340582	.	G	GT	979.21	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-0.984;DP=612;FS=3.172;HRun=9;HaplotypeScore=70.2982;InbreedingCoeff=0.9419;MQ=74.25;MQ0=0;MQRankSum=0.115;QD=13.79;ReadPosRankSum=-2.934;VQSLOD=3.2269;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:32,1:33:59.80:0,60,748	1/1:1,9:11:17.88:180,18,0	0/0:23,0:22:37.35:0,37,355	0/0:28,0:26:39.77:0,40,379	0/0:26,0:26:74.97:0,75,647	0/0:28,0:28:74.97:0,75,651	0/0:21,1:22:26.70:0,27,452	1/1:8,3:37:69.26:402,69,0	0/0:14,1:15:5.81:0,6,279	0/0:23,0:23:59.97:0,60,521	0/0:21,0:21:53.91:0,54,455	0/0:12,0:12:35.99:0,36,312	0/0:17,1:18:10.28:0,10,350	0/0:18,0:18:44.98:0,45,388	1/1:3,20:23:28.10:538,28,0	0/0:16,0:16:38.99:0,39,339	0/0:18,0:18:41.96:0,42,359	0/0:13,0:13:26.97:0,27,234	0/0:25,0:25:50.97:0,51,439	0/0:35,0:35:86.96:0,87,751	0/0:21,0:21:53.99:0,54,469	0/0:19,0:19:51.25:0,51,420	0/0:28,0:28:71.92:0,72,622	0/0:14,0:14:38.94:0,39,328	0/0:18,0:18:44.98:0,45,390	0/0:20,0:20:44.98:0,45,391	0/0:29,0:29:83.98:0,84,729	0/0:17,1:18:20.81:0,21,409
chr10	46341064	.	AG	A	1318.35	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=5.373;DP=641;FS=0.536;HRun=7;HaplotypeScore=106.2162;InbreedingCoeff=0.9972;MQ=74.95;MQ0=0;MQRankSum=-0.912;QD=21.97;ReadPosRankSum=0.847;VQSLOD=2.6494;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,132,1630	1/1:0,9:9:24.05:245,24,0	0/0:12,0:12:26.63:0,27,319	0/0:14,0:14:23.96:0,24,260	0/0:26,1:27:44.62:0,45,862	0/0:23,0:23:66.21:0,66,827	0/0:18,0:18:51.16:0,51,641	1/1:7,17:24:51.09:512,51,0	0/0:20,1:21:32.59:0,33,721	0/0:21,0:21:45.14:0,45,555	0/0:24,1:25:32.79:0,33,721	0/0:15,0:15:42.12:0,42,515	0/0:20,0:20:60.19:0,60,754	0/0:18,0:18:51.15:0,51,628	1/1:3,24:27:69.16:704,69,0	0/0:25,0:25:75.24:0,75,944	0/0:25,0:25:63.19:0,63,780	0/0:25,0:25:60.17:0,60,738	0/0:26,0:26:72.17:0,72,874	0/0:24,0:24:66.21:0,66,828	0/0:33,0:33:90.27:0,90,1110	0/0:15,0:15:45.14:0,45,561	0/0:26,0:26:69.21:0,69,851	0/0:23,0:23:54.16:0,54,665	0/0:25,0:25:75.22:0,75,921	0/0:32,0:32:87.28:0,87,1085	0/0:26,0:25:75.21:0,75,916	0/0:8,0:8:24.08:0,24,301
chr10	46341319	.	CT	C	7085.98	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=11.201;DP=609;FS=11.074;HRun=1;HaplotypeScore=146.9952;InbreedingCoeff=0.9957;MQ=78.57;MQ0=0;MQRankSum=-3.966;QD=35.61;ReadPosRankSum=0.615;VQSLOD=2.8964;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,99,1560	0/0:5,0:5:15.03:0,15,170	0/0:18,0:18:52.73:0,53,819	0/0:23,0:22:66.23:0,66,1050	1/1:1,11:12:17.62:206,18,0	0/0:21,0:21:60.20:0,60,948	0/0:18,0:18:51.15:0,51,721	0/0:31,0:31:93.08:0,93,1371	0/0:25,0:25:72.25:0,72,1137	1/1:0,23:22:62.86:853,63,0	1/1:1,25:26:62.61:761,63,0	0/0:17,0:17:42.12:0,42,587	0/0:13,0:13:39.10:0,39,588	1/1:2,20:22:66.21:903,66,0	0/0:35,0:35:99:0,105,1605	1/1:3,16:19:25.36:691,25,0	1/1:0,29:29:72.19:1005,72,0	1/1:2,14:16:48.14:650,48,0	0/0:12,0:12:33.09:0,33,464	0/0:32,0:32:96.31:0,96,1474	0/0:28,0:28:81.26:0,81,1262	0/0:20,0:20:60.18:0,60,876	0/0:24,0:24:69.14:0,69,981	0/0:27,0:27:72.25:0,72,1138	1/1:0,15:15:36.12:496,36,0	1/1:0,29:29:87.27:1190,87,0	0/0:26,0:25:69.02:0,69,996	1/1:2,6:8:24.08:332,24,0
chr10	46341813	.	GT	G	759.09	PASS	AB=1.000;AC=3;AF=0.056;AN=54;BaseQRankSum=8.811;DP=676;FS=11.853;HRun=3;HaplotypeScore=93.5788;InbreedingCoeff=0.8297;MQ=71.21;MQ0=1;MQRankSum=-2.816;QD=15.18;ReadPosRankSum=-0.238;VQSLOD=2.1906;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,105,1431	./.	0/0:12,0:12:23.10:0,23,321	0/0:20,0:19:47.67:0,48,613	0/0:27,0:26:72.08:0,72,911	0/0:22,0:22:63.18:0,63,840	0/0:35,0:35:98.64:0,99,1262	0/1:18,0:18:0.41:131,0,0	0/0:38,0:38:99:0,114,1507	0/0:33,0:33:90.19:0,90,1113	0/0:16,0:16:45.14:0,45,612	0/0:34,0:34:99:0,102,1378	0/0:21,0:21:63.17:0,63,836	0/0:18,0:18:47.90:0,48,655	1/1:8,24:32:83.88:733,84,0	0/0:29,0:29:84.26:0,84,1165	0/0:30,0:30:77.98:0,78,704	0/0:15,0:15:42.10:0,42,573	0/0:19,0:19:48.09:0,48,585	0/0:24,0:24:63.19:0,63,868	0/0:39,0:38:99:0,114,1551	0/0:24,0:24:60.08:0,60,790	0/0:22,0:22:63.17:0,63,835	0/0:27,0:27:69.24:0,69,926	0/0:19,0:19:54.12:0,54,704	0/0:29,0:29:81.06:0,81,957	0/0:30,0:30:87.22:0,87,1183	0/0:5,0:5:15.05:0,15,215
chr10	46341816	.	T	TG	741.53	PASS	AC=4;AF=0.074;AN=54;BaseQRankSum=-5.870;DP=671;FS=4.808;HRun=8;HaplotypeScore=97.9473;InbreedingCoeff=0.9804;MQ=71.99;MQ0=1;MQRankSum=-0.942;QD=14.83;ReadPosRankSum=0.109;VQSLOD=3.6117;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:98.98:0,99,885	./.	0/0:13,0:13:23.91:0,24,200	0/0:19,0:18:40.04:0,40,338	0/0:23,0:22:50.91:0,51,449	0/0:22,0:22:54:0,54,487	0/0:33,0:34:83.01:0,83,731	1/1:19,0:19:17.80:215,18,0	0/0:39,0:39:99:0,105,956	0/0:31,0:31:63.02:0,63,574	0/0:15,0:15:26.99:0,27,247	0/0:34,0:34:96.05:0,96,878	0/0:22,0:22:57.01:0,57,516	0/0:17,0:17:45.02:0,45,412	0/0:29,0:29:48.44:0,48,130	0/0:33,0:33:89.99:0,90,809	1/1:7,24:31:17.19:643,17,0	0/0:15,0:15:39.02:0,39,357	0/0:17,0:17:33.01:0,33,301	0/0:25,0:25:56.98:0,57,508	0/0:39,0:38:99:0,102,933	0/0:25,0:25:53.94:0,54,483	0/0:24,0:24:56.96:0,57,505	0/0:24,0:26:61.07:0,61,525	0/0:19,0:19:39.01:0,39,356	0/0:30,0:30:44.92:0,45,401	0/0:28,0:28:75.03:0,75,686	0/0:5,0:5:15.01:0,15,137
chr10	46341823	.	GGA	G	799.93	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.347;DP=657;FS=16.226;HRun=0;HaplotypeScore=99.8406;InbreedingCoeff=0.9331;MQ=74.30;MQ0=1;MQRankSum=-2.775;QD=24.24;ReadPosRankSum=0.582;VQSLOD=3.6347;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,117,1868	1/1:2,0:2:5.89:37,6,0	0/0:13,0:13:30.07:0,30,437	0/0:22,0:21:39.25:0,39,702	0/0:21,0:20:57.11:0,57,897	0/0:20,0:20:60.17:0,60,971	0/0:35,0:35:96.06:0,96,1533	0/0:20,0:20:45:0,45,503	0/0:37,0:37:99:0,111,1876	0/0:23,0:23:66.22:0,66,1134	0/0:14,0:14:27.06:0,27,475	0/0:32,0:32:96.33:0,96,1680	0/0:22,0:22:66.16:0,66,1064	0/0:18,0:18:51.16:0,51,851	1/1:4,27:31:78.20:875,78,0	0/0:33,0:33:96.32:0,96,1654	0/0:32,0:32:81.01:0,81,806	0/0:16,0:16:45.12:0,45,724	0/0:13,0:13:36.09:0,36,587	0/0:24,0:24:60.16:0,60,986	0/0:39,0:38:99:0,108,1823	0/0:26,0:26:63.18:0,63,1041	0/0:22,0:22:57.18:0,57,999	0/0:27,0:27:74.82:0,75,1084	0/0:17,0:17:44.50:0,44,703	0/0:23,0:23:60.18:0,60,961	0/0:30,0:30:84.12:0,84,1374	0/0:5,0:5:15.05:0,15,255
chr10	46342031	.	CTTT	C	5631.05	PASS	AB=0.605;AC=31;AF=0.554;AN=56;BaseQRankSum=-8.855;DP=677;FS=16.916;HRun=14;HaplotypeScore=118.8589;InbreedingCoeff=0.6298;MQ=62.66;MQ0=16;MQRankSum=-0.687;QD=13.54;ReadPosRankSum=3.014;VQSLOD=1.9461;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,29:34:74.83:786,75,0	0/0:4,0:11:15.59:0,16,191	0/0:33,0:12:23.94:0,24,232	0/0:29,0:14:8.92:0,9,138	0/1:8,0:21:9.87:10,0,12	1/1:4,16:20:13.70:395,14,0	1/1:4,17:21:33.05:386,33,0	0/0:29,0:45:83.16:0,83,927	1/1:3,19:22:27.05:312,27,0	0/1:7,1:26:25.16:25,0,74	0/0:9,0:29:24.88:0,25,83	1/1:4,21:24:38.93:454,39,0	1/1:3,12:15:23.99:278,24,0	0/0:5,0:17:9.97:0,10,23	0/0:4,0:31:50.30:0,50,370	0/1:6,1:23:33.06:33,0,37	0/0:4,0:32:27.41:0,27,60	0/1:10,0:19:28.37:28,0,51	1/1:7,18:24:40.39:453,40,0	1/1:3,23:27:56.96:620,57,0	1/1:5,11:16:20.97:246,21,0	1/1:5,10:15:17.92:208,18,0	1/1:5,16:20:27.65:345,28,0	1/1:5,26:31:57.06:664,57,0	0/0:8,0:19:14.21:0,14,48	0/1:8,2:24:7.64:8,0,69	1/1:2,22:25:31.45:380,31,0	0/0:4,0:11:11.71:0,12,43
chr10	46342250	.	TG	T	10625.83	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=12.928;DP=656;FS=24.550;HRun=3;HaplotypeScore=71.5721;InbreedingCoeff=0.9997;MQ=84.79;MQ0=0;MQRankSum=-1.068;QD=31.34;ReadPosRankSum=6.096;VQSLOD=2.9198;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,46:49:99:1557,129,0	1/1:1,9:10:27.08:334,27,0	0/0:29,0:29:43.83:0,44,721	0/0:24,0:23:48.05:0,48,596	0/0:33,0:33:99:0,99,1382	1/1:0,19:19:51.12:613,51,0	1/1:0,27:27:72.23:890,72,0	0/0:30,0:30:79.40:0,79,1024	1/1:1,20:21:48.15:593,48,0	0/0:21,0:21:63.13:0,63,845	0/0:22,0:22:60.17:0,60,818	1/1:0,15:14:36.11:443,36,0	1/1:0,11:11:30.09:371,30,0	0/0:15,0:15:42.10:0,42,580	1/1:0,18:18:42.13:519,42,0	0/0:21,0:21:63.17:0,63,850	0/0:31,0:31:93.26:0,93,1279	0/0:29,0:29:87.11:0,87,1109	1/1:1,24:25:72.21:877,72,0	1/1:0,24:24:72.09:852,72,0	1/1:1,22:23:51.16:631,51,0	1/1:0,19:19:57.09:684,57,0	1/1:2,20:22:54.17:668,54,0	1/1:0,22:22:54.17:668,54,0	0/0:20,0:20:60.16:0,60,794	0/0:31,0:31:86.26:0,86,1112	1/1:1,33:34:75.24:927,75,0	0/0:10,0:10:30.10:0,30,431
chr10	46343262	.	G	GA	3070.93	PASS	AB=0.655;AC=28;AF=0.500;AN=56;BaseQRankSum=-3.868;DP=487;FS=0.000;HRun=13;HaplotypeScore=60.9854;InbreedingCoeff=0.2901;MQ=65.35;MQ0=10;MQRankSum=-1.632;QD=8.85;ReadPosRankSum=-0.868;VQSLOD=2.2988;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:26,15:41:60.30:627,60,0	0/0:7,0:7:11.84:0,12,82	0/0:10,0:9:0.27:0,0,52	0/1:13,0:8:7.84:8,0,44	1/1:4,16:20:21.30:314,21,0	0/0:10,0:10:16.31:0,16,107	0/0:24,0:22:18:0,18,260	1/1:11,16:27:35.68:405,36,0	0/1:5,7:12:26.30:52,0,26	0/1:6,13:19:29.28:178,0,29	0/1:11,5:17:26.77:102,0,27	0/1:6,11:17:9.19:94,0,9	1/1:13,2:15:11.72:113,12,0	1/1:3,12:16:9.47:81,9,0	0/0:12,0:12:32.67:0,33,223	1/1:2,5:7:19.07:152,19,0	0/1:11,17:27:48.74:110,0,49	0/1:1,11:12:2.56:121,0,3	0/0:18,0:19:34.01:0,34,223	0/0:13,0:15:39.55:0,40,248	0/0:17,0:17:29.52:0,30,204	0/1:7,6:13:8.68:57,0,9	0/1:3,12:16:4.78:84,0,5	0/1:6,15:21:3.94:258,0,4	1/1:4,13:16:3.51:165,4,0	1/1:19,4:22:29.92:253,30,0	0/0:22,0:25:26.14:0,26,275	1/1:3,7:10:9.01:84,9,0
chr10	46344206	.	G	GT	2752.76	PASS	AB=0.850;AC=24;AF=0.429;AN=56;BaseQRankSum=-5.326;DP=581;FS=4.076;HRun=13;HaplotypeScore=71.0028;InbreedingCoeff=0.4700;MQ=71.83;MQ0=2;MQRankSum=-1.627;QD=9.09;ReadPosRankSum=-2.109;VQSLOD=2.5221;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:32:58.30:0,58,391	0/0:8,0:9:7.93:0,8,47	0/0:18,0:14:17.52:0,18,110	0/1:22,0:19:2.27:2,0,56	1/1:4,15:21:8.05:285,8,0	0/0:19,0:21:39.67:0,40,257	0/0:22,0:23:49.53:0,50,332	1/1:12,26:40:39.38:599,39,0	0/1:9,1:10:1.05:1,0,138	0/1:12,7:20:30.18:152,0,30	1/1:3,8:13:6.02:155,6,0	0/0:16,1:17:4.80:0,5,178	0/0:16,0:17:31.62:0,32,209	1/1:5,15:22:24.09:334,24,0	0/0:26,0:28:68.95:0,69,463	1/1:3,16:21:29.71:252,30,0	1/1:4,17:23:23.03:231,23,0	0/1:13,5:20:55.45:201,0,55	0/0:17,1:18:1.84:0,2,156	0/1:23,3:26:5.19:5,0,258	0/1:15,2:17:20.94:21,0,167	0/0:15,1:16:5.62:0,6,178	0/0:15,1:16:1.52:0,2,146	0/0:23,2:25:19.69:0,20,280	1/1:4,10:14:30.03:279,30,0	1/1:9,13:22:18.39:291,18,0	0/0:32,3:37:37.59:0,38,531	1/1:2,7:10:0.29:133,0,0
chr10	46344360	.	TC	T	3025.97	PASS	AB=0.883;AC=28;AF=0.500;AN=56;BaseQRankSum=4.915;DP=460;FS=0.000;HRun=11;HaplotypeScore=86.0750;InbreedingCoeff=0.7755;MQ=79.66;MQ0=0;MQRankSum=1.195;QD=12.66;ReadPosRankSum=3.801;VQSLOD=3.6876;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,17:22:47.93:394,48,0	1/1:1,0:3:4.07:12,4,0	0/0:24,0:22:17.17:0,17,167	0/0:18,0:12:5.88:0,6,107	0/0:23,0:23:5.51:0,6,199	0/0:20,2:22:14.34:0,14,332	0/0:20,0:20:47.92:0,48,459	0/0:25,0:25:7.57:0,8,145	1/1:3,8:11:6.84:112,7,0	0/0:4,0:7:8.72:0,9,57	0/0:8,0:8:5.94:0,6,43	1/1:5,6:11:15.68:185,16,0	1/1:3,7:10:20.96:170,21,0	0/0:16,0:16:32.75:0,33,315	1/1:6,0:29:42.55:123,43,0	0/0:12,0:12:23.78:0,24,205	0/0:22,2:24:23.43:0,23,431	0/0:7,0:16:14.71:0,15,113	1/1:1,10:11:29.95:243,30,0	1/1:2,17:19:47.80:382,48,0	1/1:3,22:25:53.93:443,54,0	1/1:7,12:19:32.88:263,33,0	1/1:4,4:8:14.92:117,15,0	1/1:4,6:10:20.97:172,21,0	0/1:21,2:23:2.16:2,0,261	0/1:9,2:11:34.71:35,0,38	1/1:5,22:27:71.86:585,72,0	0/0:6,0:6:18:0,18,179
chr10	46344992	.	CCTTT	C	2041.20	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.376;DP=630;FS=3.928;HRun=0;HaplotypeScore=100.6747;InbreedingCoeff=0.9676;MQ=81.45;MQ0=0;MQRankSum=-4.224;QD=47.47;ReadPosRankSum=2.728;VQSLOD=4.1365;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,120,3059	1/1:0,4:4:9.03:171,9,0	0/0:18,0:18:51.17:0,51,1308	0/0:26,0:25:72.24:0,72,1725	0/0:24,0:24:69.23:0,69,1795	0/0:29,0:29:84.29:0,84,2185	0/0:30,0:30:84.27:0,84,2194	0/0:26,0:26:75.24:0,75,1865	0/0:23,0:23:69.24:0,69,1851	0/0:23,0:23:69.22:0,69,1735	0/0:13,0:13:36.12:0,36,930	0/0:21,0:21:63.22:0,63,1692	0/0:21,0:21:63.22:0,63,1614	0/0:26,0:26:72.25:0,72,1902	1/1:1,38:39:99:1985,105,0	0/0:30,0:30:87.30:0,87,2345	0/0:19,0:19:54.19:0,54,1458	0/0:20,0:20:57.15:0,57,1478	0/0:19,0:19:54.16:0,54,1358	0/0:15,0:15:42.14:0,42,1091	0/0:22,0:22:66.20:0,66,1620	0/0:9,0:9:27.09:0,27,729	0/0:16,0:16:45.15:0,45,1204	0/0:35,0:35:99:0,102,2671	0/0:16,0:16:45.14:0,45,1120	0/0:28,0:28:84.27:0,84,2134	0/0:27,0:27:75.26:0,75,1973	0/0:8,0:8:24.08:0,24,638
chr10	46350007	.	TTG	T	14544.82	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-8.560;DP=777;FS=1.856;HRun=0;HaplotypeScore=116.4325;InbreedingCoeff=0.9996;MQ=86.52;MQ0=1;MQRankSum=-3.226;QD=36.27;ReadPosRankSum=3.387;VQSLOD=7.0680;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,40:40:99:1525,111,0	0/0:11,0:11:30.10:0,30,519	0/0:29,0:29:72.24:0,72,1219	0/0:26,0:26:61.04:0,61,1163	0/0:16,0:16:48.16:0,48,840	1/1:1,17:18:48.16:659,48,0	1/1:1,39:40:99:1443,105,0	0/0:25,0:25:69.24:0,69,1222	1/1:2,37:38:90.26:1215,90,0	0/0:31,0:31:87.20:0,87,1520	0/0:14,0:14:42.14:0,42,743	1/1:0,33:33:93.31:1278,93,0	1/1:2,24:26:69.23:948,69,0	0/0:32,0:32:96.33:0,96,1695	0/0:33,0:33:96.29:0,96,1670	0/0:32,0:32:87.27:0,87,1500	0/0:40,0:40:99:0,114,1977	0/0:31,0:31:84.29:0,84,1470	1/1:1,14:15:42.14:575,42,0	1/1:1,15:16:39.09:514,39,0	1/1:2,69:71:99:2639,193,0	1/1:2,12:14:36.12:495,36,0	1/1:0,19:19:53.86:742,54,0	1/1:2,39:41:99:1443,105,0	0/0:20,0:20:60.21:0,60,1056	0/0:26,0:26:72.25:0,72,1278	1/1:1,28:29:78.26:1070,78,0	0/0:10,0:10:24.08:0,24,419
chr10	46351817	.	A	AG	366.20	PASS	AB=0.667;AC=33;AF=0.971;AN=34;BaseQRankSum=-1.248;DP=41;FS=4.314;HRun=1;HaplotypeScore=19.5989;InbreedingCoeff=-0.0449;MQ=140.31;MQ0=0;MQRankSum=-1.506;QD=9.64;ReadPosRankSum=-0.990;VQSLOD=0.7939;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,1:5:2.99:24,3,0	./.	1/1:7,0:9:13.67:50,14,0	0/1:2,0:4:4.37:9,0,4	1/1:1,0:1:2.99:24,3,0	1/1:1,1:2:5.91:40,6,0	./.	./.	./.	./.	./.	1/1:0,1:1:2.80:13,3,0	./.	1/1:1,0:1:3:25,3,0	1/1:3,0:3:3:25,3,0	1/1:1,1:2:5.79:38,6,0	1/1:2,0:2:5.99:49,6,0	./.	1/1:1,0:1:3:27,3,0	1/1:0,1:1:2.80:13,3,0	./.	1/1:1,1:2:5.86:37,6,0	./.	1/1:1,0:1:2.99:24,3,0	1/1:0,1:1:2.88:15,3,0	1/1:1,0:1:3:28,3,0	./.	1/1:0,0:1:0.89:2,1,0
chr10	46352324	.	C	CCATT	5049.86	PASS	AB=0.774;AC=13;AF=0.232;AN=56;BaseQRankSum=-10.902;DP=598;FS=6.476;HRun=0;HaplotypeScore=91.6241;InbreedingCoeff=0.8228;MQ=75.19;MQ0=1;MQRankSum=1.812;QD=27.00;ReadPosRankSum=-0.620;VQSLOD=4.0867;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:21,17:40:45.15:1071,45,0	0/0:10,0:10:9.03:0,9,142	0/0:20,0:18:3.01:0,3,47	0/0:19,0:16:9.03:0,9,142	0/0:21,0:21:45.13:0,45,668	1/1:7,12:20:24.08:571,24,0	1/1:14,12:26:14.15:558,14,0	0/0:28,0:28:33.10:0,33,496	0/0:25,0:25:39.08:0,39,546	0/0:24,0:24:45.13:0,45,661	0/0:17,0:17:33.11:0,33,513	0/0:26,0:26:48.16:0,48,758	0/0:16,0:17:27.09:0,27,407	0/0:10,0:10:9.03:0,9,142	0/0:22,0:22:45.14:0,45,688	0/0:7,0:8:12.03:0,12,170	0/0:35,0:35:75.24:0,75,1162	0/0:18,0:18:35.97:0,36,543	0/1:17,7:24:23.28:476,0,23	1/1:9,13:22:30.07:661,30,0	1/1:11,19:30:51.18:1214,51,0	0/0:19,0:19:42.14:0,42,661	0/0:18,0:18:36.12:0,36,568	0/0:20,0:20:33.10:0,33,482	0/0:17,0:17:24.08:0,24,379	0/0:30,0:30:57.19:0,57,898	1/1:10,12:21:21.07:500,21,0	0/0:6,0:6:12.04:0,12,189
chr10	46352643	.	TCTGTAGCCCAAA	T	2786.94	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.283;DP=752;FS=4.902;HRun=0;HaplotypeScore=249.1657;InbreedingCoeff=0.9987;MQ=86.63;MQ0=0;MQRankSum=-8.387;QD=69.67;ReadPosRankSum=2.580;VQSLOD=2.6771;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,160,9439	1/1:0,9:9:24.08:895,24,0	0/0:38,0:39:95.90:0,96,4527	0/0:30,0:30:81.23:0,81,3596	0/0:21,0:20:54.19:0,54,3215	0/0:24,0:24:66.23:0,66,3836	0/0:38,0:38:99:0,111,6188	0/0:33,0:33:93.31:0,93,5115	0/0:33,0:33:96.32:0,96,5160	0/0:18,0:18:51.14:0,51,2708	0/0:18,0:18:54.17:0,54,3086	0/0:34,0:34:99:0,102,6051	0/0:15,0:15:42.14:0,42,2526	0/0:21,0:21:60.21:0,60,3633	1/1:5,26:31:54.19:2013,54,0	0/0:22,0:22:54.19:0,54,3015	0/0:46,0:46:99:0,132,8005	0/0:21,0:21:57.20:0,57,3471	0/0:19,0:19:57.15:0,57,3047	0/0:19,0:19:57.20:0,57,3316	0/0:57,0:57:99:0,166,9787	0/0:24,0:24:69.22:0,69,3987	0/0:20,0:20:54.19:0,54,3043	0/0:23,0:23:66.23:0,66,3603	0/0:23,0:23:66.23:0,66,4043	0/0:23,0:23:63.22:0,63,3745	0/0:24,0:24:66.14:0,66,3663	0/0:12,0:12:30.10:0,30,1634
chr10	46354562	.	G	GGCCCACA	28911.19	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-9.387;DP=611;FS=4.749;HRun=0;HaplotypeScore=133.6120;InbreedingCoeff=0.9964;MQ=67.59;MQ0=0;MQRankSum=-19.145;QD=90.07;ReadPosRankSum=1.350;VQSLOD=5.8976;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,30:38:96.33:3709,96,0	1/1:0,9:9:27.09:1059,27,0	0/0:12,0:12:32.80:0,33,565	0/0:13,0:13:15.43:0,15,389	0/0:17,0:17:51.18:0,51,1425	1/1:3,9:14:36.12:1399,36,0	1/1:6,18:27:66.23:2707,66,0	0/0:28,0:28:78.23:0,78,1883	1/1:4,16:21:57.20:2236,57,0	0/0:37,0:37:99:0,111,2980	0/0:8,0:8:21.05:0,21,469	1/1:5,22:31:78.27:3086,78,0	1/1:6,22:28:78.27:3112,78,0	0/0:20,0:20:60.21:0,60,1608	1/1:2,17:21:57.17:2223,57,0	0/0:24,0:24:69.21:0,69,1788	0/0:36,0:36:99:0,102,2795	0/0:33,0:33:99:0,99,2694	1/1:2,11:15:42.14:1674,42,0	1/1:2,6:12:24.04:842,24,0	1/1:3,20:26:33.11:1263,33,0	1/1:2,13:18:30.10:1180,30,0	1/1:0,11:16:24.04:790,24,0	1/1:3,15:21:29.77:1124,30,0	0/0:23,0:23:69.24:0,69,1916	0/0:29,0:29:84.28:0,84,2230	1/1:0,20:24:60.21:2509,60,0	0/0:10,0:10:30.10:0,30,839
chr10	46358848	.	AG	A	5509.28	PASS	AB=1.000;AC=31;AF=0.554;AN=56;BaseQRankSum=11.144;DP=381;FS=3.988;HRun=5;HaplotypeScore=37.6022;InbreedingCoeff=0.9341;MQ=69.17;MQ0=1;MQRankSum=0.993;QD=28.11;ReadPosRankSum=2.289;VQSLOD=4.7175;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,26:29:63.18:714,63,0	1/1:0,8:8:24.07:272,24,0	0/0:8,0:7:21.07:0,21,272	0/1:8,0:8:5.26:5,0,149	0/0:15,0:15:45.13:0,45,582	1/1:1,17:18:48.14:544,48,0	1/1:1,12:13:33.09:374,33,0	0/0:21,0:21:63.19:0,63,832	1/1:1,8:9:24.07:272,24,0	0/0:15,0:15:45.15:0,45,616	0/0:19,0:19:54.18:0,54,738	1/1:1,7:8:21.06:238,21,0	1/1:0,5:5:15.04:170,15,0	0/0:5,0:5:15.05:0,15,205	1/1:0,6:6:18.05:204,18,0	0/0:14,0:14:30.10:0,30,409	0/0:20,0:20:54.18:0,54,738	0/0:17,1:18:28.29:0,28,572	1/1:3,15:18:48.13:538,48,0	1/1:1,14:15:39.11:442,39,0	1/1:2,12:14:33.09:374,33,0	1/1:0,6:6:15.04:170,15,0	1/1:1,7:8:21.06:238,21,0	1/1:2,9:11:27.08:306,27,0	0/0:15,0:15:45.15:0,45,615	0/0:23,0:23:32.35:0,32,826	1/1:0,20:20:57.16:646,57,0	0/0:12,0:12:36.12:0,36,492
chr10	46359326	.	TACACACACACAC	T	1292.35	PASS	AB=0.921;AC=23;AF=0.479;AN=48;BaseQRankSum=3.451;DP=397;FS=1.103;HRun=0;HaplotypeScore=125.4125;InbreedingCoeff=0.3757;MQ=73.60;MQ0=7;MQRankSum=-4.462;QD=8.08;ReadPosRankSum=-1.160;VQSLOD=2.4399;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:38:45.14:0,45,1274	1/1:3,0:4:3.01:50,3,0	./.	0/0:35,0:27:1.72:0,2,4	1/1:9,6:15:2.80:13,3,0	1/1:11,0:13:2.22:7,2,0	0/1:11,0:11:2.81:3,0,54	0/0:30,0:28:2.44:0,2,6	0/0:9,0:10:12.04:0,12,311	./.	1/1:6,6:12:6.02:205,6,0	0/0:5,0:6:3.01:0,3,112	0/0:5,0:5:3.01:0,3,43	./.	1/1:11,0:13:3.48:32,3,0	1/1:7,1:8:2.23:101,2,0	1/1:21,4:26:3.01:102,3,0	1/1:16,4:20:12.50:410,13,0	0/0:14,0:15:6.49:0,6,100	0/1:9,1:11:33.04:103,0,33	0/0:16,0:16:3.01:0,3,54	0/0:10,0:10:6.02:0,6,154	0/0:4,0:5:3.01:0,3,100	0/0:12,0:14:12.04:0,12,333	1/1:5,6:11:9.03:307,9,0	./.	0/1:10,0:11:2.03:2,0,90	1/1:2,2:4:3.01:102,3,0
chr10	46360111	.	AATGG	A	129.34	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=2.889;DP=530;FS=1.791;HRun=0;HaplotypeScore=98.4125;InbreedingCoeff=0.8289;MQ=51.18;MQ0=37;MQRankSum=-0.254;QD=12.93;ReadPosRankSum=-0.056;VQSLOD=3.3514;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:59.90:0,60,1183	1/1:1,0:1:2.99:24,3,0	0/0:40,0:6:15.02:0,15,323	0/0:27,0:6:15.02:0,15,256	0/0:10,0:10:24.04:0,24,492	0/0:12,0:12:27.09:0,27,578	0/0:38,0:37:99:0,99,2081	0/0:18,0:17:27.04:0,27,511	0/0:17,0:17:42.13:0,42,978	0/0:21,0:20:48.03:0,48,895	0/0:12,0:12:23.73:0,24,487	0/0:26,0:25:57.17:0,57,1258	0/0:19,0:19:51.12:0,51,1050	0/0:19,0:19:51.11:0,51,1058	1/1:4,5:9:12.04:207,12,0	0/0:19,0:19:49.04:0,49,1049	0/0:19,0:18:38.66:0,39,770	0/0:14,0:14:36.05:0,36,745	0/0:17,0:14:23.85:0,24,410	0/0:6,0:6:18.03:0,18,327	0/0:69,0:65:99:0,150,3120	0/0:11,0:11:26.99:0,27,519	0/0:4,0:4:9.01:0,9,175	0/0:19,0:18:33:0,33,666	0/0:12,0:11:33.10:0,33,727	0/0:30,0:29:72.22:0,72,1562	0/0:10,0:10:30.04:0,30,512	0/0:8,0:8:21.02:0,21,438
chr10	46360156	.	ATGGATGGG	A	182.13	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=4.377;DP=509;FS=0.000;HRun=0;HaplotypeScore=121.8997;InbreedingCoeff=0.6002;MQ=50.36;MQ0=34;MQRankSum=-2.688;QD=3.96;ReadPosRankSum=-1.515;VQSLOD=2.1939;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:75.01:0,75,1815	1/1:1,0:1:3.01:48,3,0	0/0:31,0:8:10.80:0,11,286	0/1:34,0:13:4.02:4,0,308	0/0:9,0:9:9.02:0,9,197	0/0:12,0:12:22.32:0,22,703	0/0:18,0:18:48.10:0,48,1418	0/0:26,0:21:42.11:0,42,986	0/0:17,0:16:39.10:0,39,1131	0/0:18,0:16:23.63:0,24,878	0/0:12,0:10:21.05:0,21,638	0/0:20,0:20:51.18:0,51,1907	0/0:16,0:16:21.07:0,21,748	0/0:24,0:23:57.20:0,57,1872	1/1:2,9:11:9.03:233,9,0	0/0:20,0:20:42.10:0,42,1158	0/0:20,0:19:42.10:0,42,1028	0/0:20,0:20:51.14:0,51,1624	0/0:13,0:8:14.89:0,15,274	0/0:6,0:4:5.61:0,6,135	0/0:65,0:62:99:0,105,3141	0/0:7,0:6:17.99:0,18,394	0/0:8,0:5:12.01:0,12,272	0/0:20,0:20:39.13:0,39,1367	0/0:9,0:7:12.03:0,12,375	0/0:30,0:28:60.15:0,60,1655	0/0:6,0:6:18.06:0,18,577	0/0:7,0:7:18.06:0,18,675
chr10	46360245	.	GGT	G	422.68	PASS	AB=0.855;AC=12;AF=0.214;AN=56;BaseQRankSum=8.200;DP=530;FS=51.363;HRun=0;HaplotypeScore=96.4430;InbreedingCoeff=-0.2625;MQ=50.62;MQ0=24;MQRankSum=-5.557;QD=2.04;ReadPosRankSum=-2.108;VQSLOD=-0.2566;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:24,4:27:29.90:30,0,990	0/0:7,1:8:18.06:0,18,353	0/0:34,0:7:20.95:0,21,278	0/0:38,0:12:30.09:0,30,483	0/0:14,0:14:18.06:0,18,365	0/1:17,3:18:51.18:51,0,677	0/1:22,3:24:33.03:33,0,917	0/0:30,0:28:84.27:0,84,1590	0/1:11,3:13:43.13:43,0,512	0/0:23,0:21:63.22:0,63,1230	0/0:11,0:11:21.07:0,21,427	0/1:16,0:15:21.83:22,0,78	0/0:11,0:11:15.02:0,15,272	0/0:18,0:18:54.17:0,54,1019	0/1:9,2:11:34.56:35,0,153	0/0:16,0:16:48.15:0,48,938	0/0:27,0:27:78.27:0,78,1541	0/0:27,0:27:81.28:0,81,1604	0/1:14,1:10:99:105,0,337	0/1:5,2:7:49.94:50,0,167	0/1:44,3:46:66.89:67,0,1041	0/1:9,3:12:61.29:61,0,341	0/1:4,2:6:0.98:1,0,167	0/0:17,2:19:33.09:0,33,621	0/0:8,0:8:19.62:0,20,370	0/0:30,0:27:78.27:0,78,1570	0/1:4,2:5:72.56:73,0,110	0/0:9,0:8:21.07:0,21,426
chr10	46360249	.	GGT	G	439.18	PASS	AB=0.868;AC=12;AF=0.214;AN=56;BaseQRankSum=8.000;DP=518;FS=47.980;HRun=0;HaplotypeScore=92.5265;InbreedingCoeff=-0.2774;MQ=50.05;MQ0=26;MQRankSum=-5.889;QD=2.10;ReadPosRankSum=-1.479;VQSLOD=-0.3527;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:24,4:27:47.48:47,0,702	0/0:7,1:8:15.05:0,15,268	0/0:33,0:6:17:0,17,190	0/0:39,0:11:27.03:0,27,402	0/0:15,0:15:21.06:0,21,358	0/1:17,3:18:44.08:44,0,642	0/1:19,3:21:36.41:36,0,656	0/0:30,0:29:84.28:0,84,1581	0/1:11,3:13:34.32:34,0,475	0/0:25,0:23:63.22:0,63,1172	0/0:9,0:9:21.07:0,21,403	0/1:15,0:14:21.92:22,0,52	0/1:12,0:12:20.91:21,0,204	0/0:17,0:17:48.16:0,48,902	0/1:4,2:6:35.17:35,0,105	0/0:14,0:14:42.14:0,42,811	0/0:24,0:24:69.22:0,69,1299	0/0:26,0:26:75.26:0,75,1428	0/1:15,1:9:99:99,0,249	0/1:5,2:7:45.27:45,0,159	0/1:48,3:49:81.19:81,0,805	0/1:9,3:12:58.30:58,0,268	0/0:5,1:6:9.80:0,10,127	0/0:14,2:16:30.07:0,30,522	0/0:9,0:9:22.63:0,23,395	0/0:29,0:27:81.14:0,81,1440	0/1:4,2:5:66.68:67,0,104	0/0:9,0:8:21.07:0,21,405
chr10	46360251	.	T	TGGGTGGATGGAG	4575	PASS	AB=1.000;AC=27;AF=0.482;AN=56;BaseQRankSum=8.582;DP=523;FS=57.602;HRun=0;HaplotypeScore=162.1881;InbreedingCoeff=0.6947;MQ=48.75;MQ0=27;MQRankSum=-4.791;QD=17.13;ReadPosRankSum=-2.294;VQSLOD=2.0579;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:23:15.07:707,15,0	0/0:8,0:8:2.94:0,3,18	0/1:31,0:6:0:0,0,0	0/0:39,0:10:8.06:0,8,99	0/0:14,0:14:6.02:0,6,140	1/1:20,0:18:9.38:356,9,0	0/1:20,0:19:10.96:272,0,11	0/0:30,0:28:54.14:0,54,1223	1/1:15,0:14:21.71:461,22,0	0/0:24,0:22:29.89:0,30,733	0/0:9,0:9:9.03:0,9,283	1/1:3,12:18:5.57:184,6,0	1/1:14,0:14:8.75:258,9,0	0/0:17,0:17:36.12:0,36,1171	1/1:7,0:7:12.04:378,12,0	0/0:15,0:15:36.12:0,36,1119	0/0:25,0:25:48.14:0,48,1492	0/0:26,0:26:63.18:0,63,1893	1/1:17,0:10:24.02:504,24,0	1/1:8,0:8:6.02:214,6,0	0/1:51,0:49:8.95:461,0,9	1/1:12,0:12:8.39:286,8,0	1/1:6,0:6:6.02:80,6,0	1/1:17,0:17:9.31:86,9,0	0/0:9,0:9:18.06:0,18,571	0/0:31,0:29:45.15:0,45,1223	1/1:6,0:5:9.92:329,10,0	0/0:9,0:8:12.03:0,12,332
chr10	46360440	.	GTA	G	155.75	PASS	AB=0.777;AC=6;AF=0.150;AN=40;BaseQRankSum=7.011;DP=210;FS=21.405;HRun=0;HaplotypeScore=79.1768;InbreedingCoeff=-0.1264;MQ=45.15;MQ0=23;MQRankSum=-4.585;QD=3.18;ReadPosRankSum=-1.374;VQSLOD=0.4241;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:1,2:3:14.03:14,0,50	./.	0/0:15,0:1:3.01:0,3,30	0/0:19,0:4:12.04:0,12,208	0/1:8,2:9:0.25:0,0,157	0/0:2,1:3:3.01:0,3,56	0/0:3,0:0:3.01:0,3,55	0/0:11,0:5:15.03:0,15,249	./.	0/1:16,4:17:99:126,0,520	0/1:7,3:10:67.54:68,0,151	0/0:1,0:1:3.01:0,3,56	./.	0/0:15,0:15:39.13:0,39,725	./.	0/0:17,0:18:31.78:0,32,772	0/0:26,2:28:26.79:0,27,1196	0/0:19,0:19:45.88:0,46,947	./.	0/0:1,0:1:3.01:0,3,56	0/1:1,0:1:0:0,0,0	./.	./.	0/1:2,3:5:45.27:45,0,89	0/0:5,0:5:15.05:0,15,280	0/0:20,1:21:16.38:0,16,993	./.	0/0:1,0:1:3.01:0,3,56
chr10	46360448	.	GAATT	G	248.75	PASS	AB=0.780;AC=5;AF=0.119;AN=42;BaseQRankSum=7.081;DP=208;FS=23.870;HRun=0;HaplotypeScore=81.1787;InbreedingCoeff=-0.1966;MQ=44.41;MQ0=22;MQRankSum=-6.307;QD=4.44;ReadPosRankSum=-0.669;VQSLOD=0.1478;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:1,2:3:54.33:54,0,76	./.	0/0:17,0:2:5.95:0,6,86	0/0:25,0:8:23.64:0,24,506	0/0:9,0:8:2.85:0,3,253	0/0:2,1:3:3.01:0,3,87	0/0:3,0:0:3.01:0,3,85	0/0:12,0:7:21.07:0,21,589	./.	0/1:18,3:18:99:115,0,762	0/1:6,2:8:72.48:72,0,178	0/0:1,0:1:3.01:0,3,87	./.	0/0:12,0:12:36.12:0,36,1037	./.	0/0:16,1:17:29.94:0,30,1149	0/0:24,0:24:54.44:0,54,1711	0/0:20,0:20:26.28:0,26,1460	0/0:1,0:1:3.01:0,3,44	0/0:1,0:1:3.01:0,3,79	0/0:1,0:1:2.37:0,2,8	./.	./.	0/1:2,3:5:72.27:106,0,72	0/0:3,0:3:9.03:0,9,227	0/1:19,0:19:0.58:1,0,1389	./.	0/0:1,0:1:3.01:0,3,87
chr10	46360459	.	T	TG	158.18	PASS	AB=0.814;AC=3;AF=0.075;AN=40;BaseQRankSum=4.973;DP=218;FS=6.808;HRun=2;HaplotypeScore=79.0620;InbreedingCoeff=-0.1484;MQ=42.80;MQ0=20;MQRankSum=-3.950;QD=3.77;ReadPosRankSum=2.256;VQSLOD=0.5018;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:3,0:3:8.92:0,9,79	./.	0/0:21,0:3:6.02:0,6,84	0/0:27,0:10:30.09:0,30,390	0/0:9,2:10:11.39:0,11,134	0/0:3,0:3:3.01:0,3,41	0/0:5,0:2:2.92:0,3,42	0/0:14,0:10:27.09:0,27,377	./.	0/1:13,6:15:99:172,0,309	0/1:6,3:8:68.66:69,0,69	0/0:1,0:1:3.01:0,3,42	./.	0/0:15,0:15:39.60:0,40,525	./.	0/1:13,1:14:2.86:3,0,464	0/0:20,0:20:60.18:0,60,821	0/0:18,0:18:54.06:0,54,689	0/0:2,0:2:5.93:0,6,59	0/0:2,0:2:4.56:0,5,46	./.	./.	./.	0/0:5,0:5:9.41:0,9,84	0/0:2,0:2:3.01:0,3,42	0/0:20,2:21:17.56:0,18,674	./.	0/0:2,0:2:5.81:0,6,55
chr10	46360502	.	G	GA	33.98	PASS	AB=0.818;AC=5;AF=0.139;AN=36;BaseQRankSum=4.260;DP=159;FS=0.000;HRun=0;HaplotypeScore=51.1779;InbreedingCoeff=0.2553;MQ=37.12;MQ0=10;MQRankSum=-0.949;QD=1.89;ReadPosRankSum=-0.096;VQSLOD=1.8162;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:1,1:2:3.01:0,3,41	./.	0/0:15,0:3:5.94:0,6,41	0/0:8,0:2:6.02:0,6,84	1/1:6,1:7:3.07:11,3,0	./.	1/1:2,0:2:2.74:12,3,0	0/0:21,0:8:21.07:0,21,288	./.	0/1:7,2:7:99:100,0,104	0/0:6,2:7:7.26:0,7,87	./.	./.	0/0:12,0:12:6.96:0,7,78	./.	0/0:22,0:22:12.02:0,12,358	0/0:12,1:13:26.79:0,27,282	0/0:9,0:9:27.08:0,27,345	0/0:4,0:1:2.99:0,3,24	0/0:2,0:2:3.01:0,3,42	./.	./.	./.	./.	0/0:1,0:1:3.01:0,3,42	0/0:15,0:13:14.62:0,15,430	0/0:2,0:2:3.01:0,3,40	0/0:2,0:1:0:0,0,0
chr10	46360781	.	GTGGGCA	G	215.59	PASS	AB=0.903;AC=10;AF=0.250;AN=40;BaseQRankSum=3.584;DP=66;FS=1.797;HRun=0;HaplotypeScore=29.1358;InbreedingCoeff=-0.0593;MQ=85.40;MQ0=0;MQRankSum=-3.287;QD=10.27;ReadPosRankSum=-0.906;VQSLOD=0.9850;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:2,0:2:6.02:0,6,220	./.	0/0:15,0:6:27.09:0,27,750	0/0:8,0:3:11.68:0,12,410	0/1:2,1:3:13.04:13,0,106	./.	0/1:3,0:3:18.69:19,0,106	0/1:3,0:4:65.90:66,0,141	./.	0/1:4,0:4:7.32:7,0,322	./.	0/0:4,0:4:12.04:0,12,429	0/1:1,1:2:70.40:70,0,106	0/0:1,0:1:3.01:0,3,106	0/0:2,0:2:6.02:0,6,214	0/1:3,0:3:2.41:2,0,215	./.	0/0:1,0:1:3.01:0,3,112	0/0:1,0:1:3.01:0,3,112	0/0:1,0:1:2.98:0,3,21	0/0:3,0:3:6.49:0,6,223	./.	0/0:1,0:1:3.01:0,3,112	./.	1/1:0,1:1:3.01:77,3,0	0/0:4,0:4:9.50:0,10,336	1/1:0,1:1:3.01:77,3,0	./.
chr10	46360853	.	GTGGA	G	451.03	PASS	AC=4;AF=0.074;AN=54;BaseQRankSum=4.626;DP=365;FS=0.000;HRun=0;HaplotypeScore=67.8823;InbreedingCoeff=0.8375;MQ=63.27;MQ0=4;MQRankSum=-0.736;QD=30.07;ReadPosRankSum=2.051;VQSLOD=3.4612;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:52.42:0,52,1257	1/1:0,7:7:15.05:257,15,0	0/0:33,0:20:38.78:0,39,674	0/0:32,0:26:43.64:0,44,847	0/0:6,0:6:18.02:0,18,394	0/0:4,0:4:12.04:0,12,302	0/0:11,0:11:33.06:0,33,708	0/0:28,0:28:60.20:0,60,1426	0/0:19,0:18:54.19:0,54,1359	0/0:14,0:13:26.34:0,26,656	0/0:8,0:8:21.07:0,21,520	0/0:20,0:20:54.19:0,54,1351	0/0:11,0:11:27.09:0,27,632	0/0:10,0:10:30.10:0,30,749	1/1:1,7:8:18.06:309,18,0	0/0:18,0:17:51.18:0,51,1284	0/0:10,0:10:30.10:0,30,734	0/0:10,0:10:30.09:0,30,692	0/0:12,0:11:21.04:0,21,474	0/0:9,0:9:24.08:0,24,578	0/0:35,0:34:99:0,99,2440	0/0:4,0:4:12.04:0,12,302	0/0:7,0:7:15.05:0,15,362	0/0:1,0:1:3.01:0,3,70	0/0:3,0:3:9:0,9,147	0/0:15,0:15:42.14:0,42,987	0/0:10,0:10:30.10:0,30,744	./.
chr10	46361287	.	A	AGG	477.41	PASS	AB=0.859;AC=34;AF=0.607;AN=56;BaseQRankSum=2.887;DP=555;FS=0.000;HRun=11;HaplotypeScore=142.2430;InbreedingCoeff=0.3482;MQ=83.14;MQ0=1;MQRankSum=1.003;QD=1.25;ReadPosRankSum=-3.569;VQSLOD=-0.2388;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:30:0:0,0,0	0/0:11,0:11:11.69:0,12,116	0/1:24,0:26:53.24:58,0,53	0/1:22,0:21:1.26:1,0,43	1/1:13,0:18:5.34:25,5,0	0/0:24,0:24:17.84:0,18,174	0/0:28,0:28:44.77:0,45,416	0/1:10,0:17:9.22:9,0,21	1/1:13,4:24:2.71:43,3,0	1/1:12,0:13:5.44:34,5,0	0/1:8,0:10:20.44:24,0,20	1/1:18,0:26:7.18:22,7,0	1/1:15,0:15:9:92,9,0	1/1:14,0:21:0.97:3,1,0	0/0:34,0:34:68.54:0,69,661	1/1:11,10:23:9.03:129,9,0	0/1:15,0:28:16.12:21,0,16	1/1:11,0:20:4.99:17,5,0	0/1:8,0:9:6.04:7,0,6	0/0:18,0:19:17.68:0,18,146	0/0:36,0:37:26.64:0,27,243	1/1:11,0:11:2.99:24,3,0	1/1:8,2:13:3:25,3,0	1/1:10,2:19:5.51:52,6,0	1/1:10,0:10:3:25,3,0	1/1:13,0:17:5.67:33,6,0	0/0:18,0:19:17.41:0,17,133	0/1:6,0:6:0:0,0,0
chr10	46362262	.	T	TG	959.38	PASS	AB=0.805;AC=40;AF=0.714;AN=56;BaseQRankSum=3.339;DP=272;FS=2.592;HRun=10;HaplotypeScore=63.1848;InbreedingCoeff=0.1304;MQ=81.68;MQ0=0;MQRankSum=-4.563;QD=4.38;ReadPosRankSum=-2.242;VQSLOD=0.2048;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:10,5:15:0:0,0,0	0/0:3,0:4:2.01:0,2,6	0/1:12,0:13:1.03:1,0,117	0/0:13,1:15:14.07:0,14,170	1/1:6,0:6:6:56,6,0	1/1:15,0:15:24.85:112,25,0	1/1:19,0:19:37.75:169,38,0	0/1:10,2:12:16:16,0,38	1/1:7,4:11:3.59:10,4,0	0/1:8,0:8:37.12:40,0,37	0/1:5,1:6:18.44:26,0,18	1/1:13,0:13:2.04:7,2,0	1/1:3,6:9:8.98:83,9,0	1/1:7,0:7:2.99:25,3,0	0/0:27,0:27:48.31:0,48,394	1/1:6,4:10:5.97:52,6,0	0/1:5,10:15:9.66:100,0,10	0/1:5,6:11:15.62:55,0,16	1/1:5,0:5:2.88:15,3,0	1/1:7,0:7:2.97:20,3,0	1/1:5,0:5:3:25,3,0	1/1:3,1:4:3.01:32,3,0	1/1:4,2:5:3.01:32,3,0	1/1:2,6:8:12.03:128,12,0	0/0:6,1:7:2.97:0,3,25	0/1:3,1:4:18.63:26,0,19	1/1:7,0:7:5.80:32,6,0	1/1:3,0:3:5.96:51,6,0
chr10	46362266	.	G	GGGC	1375.07	PASS	AB=1.000;AC=10;AF=0.179;AN=56;BaseQRankSum=-1.443;DP=233;FS=9.772;HRun=0;HaplotypeScore=55.6123;InbreedingCoeff=0.3528;MQ=83.45;MQ0=0;MQRankSum=-4.144;QD=22.54;ReadPosRankSum=3.365;VQSLOD=2.5509;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:11.96:0,12,97	0/0:5,0:5:11.97:0,12,101	0/0:12,0:12:31.97:0,32,380	0/0:15,0:15:30.13:0,30,469	0/0:5,0:5:11.49:0,11,84	1/1:2,12:14:27.08:561,27,0	1/1:0,18:20:42.14:861,42,0	0/0:10,0:10:9.14:0,9,133	0/1:10,0:10:22.30:22,0,76	0/0:5,0:5:8.15:0,8,104	0/0:5,0:5:11.80:0,12,113	0/1:8,0:8:9.52:10,0,57	0/0:9,0:9:9.34:0,9,71	0/0:3,0:3:0.47:0,0,1	0/0:27,0:27:75.15:0,75,1028	0/0:8,0:8:11.79:0,12,90	0/0:15,0:15:0.84:0,1,118	0/0:9,0:9:14.58:0,15,121	0/1:4,0:4:13.66:14,0,38	0/0:5,0:5:8.65:0,9,68	0/0:6,0:6:6.25:0,6,50	0/0:2,0:2:5.75:0,6,39	0/0:4,0:4:8.76:0,9,59	0/0:8,0:8:13.84:0,14,74	0/0:4,0:4:8.97:0,9,95	0/0:4,0:4:8.81:0,9,89	1/1:2,0:2:5.98:49,6,0	0/1:3,0:3:7.11:7,0,28
chr10	46362547	.	CA	C	1901.97	PASS	AB=0.923;AC=15;AF=0.278;AN=54;BaseQRankSum=6.271;DP=389;FS=10.749;HRun=9;HaplotypeScore=49.2666;InbreedingCoeff=0.8033;MQ=55.69;MQ0=16;MQRankSum=-0.426;QD=15.59;ReadPosRankSum=2.610;VQSLOD=2.6068;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,21:31:72.03:654,72,0	./.	0/0:13,0:7:0.24:0,0,89	0/1:11,1:5:19.55:33,0,20	0/0:9,0:9:24.07:0,24,277	0/0:7,0:6:15.03:0,15,164	0/0:23,1:24:23.42:0,23,511	0/0:23,0:22:51.13:0,51,575	1/1:1,12:13:30.01:274,30,0	0/0:12,0:11:27.06:0,27,293	0/0:9,0:9:23.96:0,24,259	1/1:3,17:20:51.03:464,51,0	1/1:3,14:17:13.90:255,14,0	0/0:18,0:16:36.11:0,36,415	0/0:15,0:15:33.06:0,33,353	0/0:11,0:11:27.01:0,27,283	0/0:31,0:31:84.20:0,84,944	0/0:18,0:17:44.94:0,45,482	0/0:13,0:13:27.06:0,27,300	0/0:6,0:6:12.03:0,12,130	0/0:18,0:17:39.07:0,39,434	1/1:3,6:9:8.85:82,9,0	1/1:3,4:6:12.01:109,12,0	1/1:4,7:12:24:219,24,0	0/0:5,0:6:11.90:0,12,116	0/0:15,0:16:35.92:0,36,373	0/0:16,0:16:26.96:0,27,254	0/0:1,0:1:2.98:0,3,21
chr10	46362683	.	GCACACA	G	2524.61	PASS	AB=0.797;AC=36;AF=0.783;AN=46;BaseQRankSum=1.681;DP=501;FS=6.383;HRun=0;HaplotypeScore=124.8295;InbreedingCoeff=0.2829;MQ=54.88;MQ0=13;MQRankSum=-2.136;QD=6.54;ReadPosRankSum=0.560;VQSLOD=1.3200;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:21,1:25:9.03:144,9,0	1/1:6,0:9:6.02:84,6,0	./.	./.	./.	0/0:7,0:8:9.03:0,9,234	0/0:25,0:32:11.43:0,11,138	1/1:21,0:21:2.74:19,3,0	1/1:8,5:15:12.04:205,12,0	1/1:15,5:20:18.06:329,18,0	1/1:8,0:10:6.02:85,6,0	1/1:13,8:21:26.27:461,26,0	1/1:5,14:20:19.48:515,19,0	0/1:12,10:23:27.86:112,0,28	1/1:11,0:16:4.24:46,4,0	0/0:10,6:16:0.15:0,0,0	1/1:19,8:28:3.01:42,3,0	1/1:21,0:22:18.03:296,18,0	0/1:15,0:18:2.61:3,0,9	./.	0/1:47,0:46:65.97:66,0,79	0/1:7,5:12:0:0,0,1	./.	1/1:18,4:22:2.91:60,3,0	1/1:9,8:18:3.01:60,3,0	1/1:15,0:15:3:60,3,0	1/1:9,0:14:3.66:8,4,0	1/1:3,0:5:5.85:56,6,0
chr10	46363133	.	GA	G	10642.47	PASS	AB=0.612;AC=51;AF=0.911;AN=56;BaseQRankSum=-5.067;DP=667;FS=46.705;HRun=11;HaplotypeScore=79.6096;InbreedingCoeff=0.7679;MQ=76.54;MQ0=0;MQRankSum=-5.351;QD=16.87;ReadPosRankSum=4.794;VQSLOD=2.6580;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,42:50:99:987,122,0	1/1:0,8:8:20.97:172,21,0	0/0:14,0:14:13.93:0,14,155	0/0:22,0:22:30.05:0,30,243	1/1:1,7:8:14.96:123,15,0	1/1:2,17:19:41.22:343,41,0	1/1:4,19:23:41.94:345,42,0	1/1:11,11:22:11.52:203,12,0	1/1:2,22:24:62.93:517,63,0	0/1:11,19:30:1.11:402,0,1	1/1:5,17:22:50.92:419,51,0	1/1:3,31:34:86.89:714,87,0	1/1:7,15:22:9.54:273,10,0	1/1:3,20:23:24.95:411,25,0	1/1:5,27:33:73.95:597,74,0	1/1:2,23:27:69.99:554,70,0	1/1:4,22:26:33.92:485,34,0	1/1:5,15:20:6.94:263,7,0	1/1:3,13:17:40.94:318,41,0	1/1:5,10:16:21.67:210,22,0	1/1:3,22:25:56.75:458,57,0	1/1:9,25:34:17.51:501,18,0	1/1:1,13:14:29.86:246,30,0	1/1:7,30:37:82.29:687,82,0	1/1:3,21:24:35.87:295,36,0	1/1:6,15:22:14.96:319,15,0	1/1:1,20:23:58:455,58,0	1/1:5,22:28:18.30:344,18,0
chr10	46366337	.	C	CG	1162.59	PASS	AB=1.000;AC=32;AF=0.842;AN=38;BaseQRankSum=-3.493;DP=89;FS=3.396;HRun=0;HaplotypeScore=134.9322;InbreedingCoeff=0.1366;MQ=48.76;MQ0=0;MQRankSum=0.501;QD=13.36;ReadPosRankSum=-2.525;VQSLOD=4.3110;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,0:6:11.74:89,12,0	./.	1/1:2,0:1:2.74:12,3,0	./.	./.	./.	1/1:14,1:15:23.23:247,23,0	0/1:3,0:3:4.67:27,0,5	1/1:2,0:2:5.99:50,6,0	1/1:1,0:1:2.99:24,3,0	./.	1/1:4,0:4:11.97:98,12,0	0/1:3,0:3:4.49:18,0,4	1/1:2,0:2:5.99:50,6,0	0/1:1,0:1:0:0,0,0	./.	1/1:5,0:5:12.33:81,12,0	1/1:7,0:7:14.93:125,15,0	0/1:2,0:2:3.67:20,0,4	./.	1/1:12,4:16:17.38:154,17,0	0/0:2,0:2:3.63:0,4,10	./.	1/1:10,0:10:5.69:99,6,0	./.	1/1:5,0:5:11.18:99,11,0	1/1:1,0:1:3:25,3,0	1/1:2,0:2:5.74:38,6,0
chr10	46367937	.	G	GCATCCTTCTGA	813.97	PASS	AB=0.804;AC=4;AF=0.67;AN=6;BaseQRankSum=-1.763;DP=17;FS=9.859;HRun=0;HaplotypeScore=78.8702;MQ=224.31;MQ0=0;MQRankSum=-0.588;QD=47.88;ReadPosRankSum=-0.718;VQSLOD=2.3747;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/1:6,0:9:41.74:572,0,42	0/1:5,1:5:54.77:234,0,55	./.	./.	./.	1/1:2,0:2:6.01:78,6,0	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.
chr10	46368032	.	TACAC	T	1233.95	PASS	AB=0.762;AC=43;AF=0.935;AN=46;BaseQRankSum=2.241;DP=376;FS=0.000;HRun=0;HaplotypeScore=90.0365;InbreedingCoeff=0.0579;MQ=67.99;MQ0=4;MQRankSum=1.153;QD=5.00;ReadPosRankSum=1.327;VQSLOD=1.8478;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:23:2.97:28,3,0	1/1:5,0:7:2.74:28,3,0	./.	0/0:41,0:27:0.89:0,1,2	./.	1/1:7,0:7:4.64:20,5,0	./.	./.	1/1:5,0:5:3:28,3,0	0/1:11,5:16:5.96:102,0,6	./.	1/1:7,0:14:15.02:140,15,0	1/1:4,0:8:9.01:84,9,0	1/1:3,3:6:6.02:93,6,0	1/1:4,0:10:12.01:112,12,0	1/1:4,6:9:3.01:46,3,0	1/1:9,8:17:3.48:47,3,0	1/1:5,1:7:9.01:100,9,0	1/1:16,0:16:2.37:8,2,0	1/1:7,0:14:12.48:113,12,0	1/1:18,0:18:0.47:1,0,0	1/1:6,0:9:6.01:56,6,0	1/1:9,0:9:2.98:21,3,0	1/1:4,0:9:6.01:56,6,0	1/1:8,3:10:3.01:46,3,0	1/1:15,3:18:8.14:107,8,0	1/1:7,0:9:6.01:56,6,0	1/1:3,0:3:2.99:24,3,0
chr10	46369764	.	AGT	A	651	PASS	AB=0.917;AC=25;AF=0.481;AN=52;BaseQRankSum=3.667;DP=529;FS=0.000;HRun=0;HaplotypeScore=105.6730;InbreedingCoeff=0.2772;MQ=64.73;MQ0=19;MQRankSum=1.191;QD=2.47;ReadPosRankSum=2.001;VQSLOD=1.7096;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:30:0.71:52,0,1	1/1:4,1:5:7.97:52,8,0	./.	./.	0/0:16,0:16:0.94:0,1,2	1/1:17,0:18:11.90:65,12,0	1/1:21,0:21:2.74:12,3,0	0/0:27,0:26:5.87:0,6,36	0/1:16,0:18:14.80:28,0,15	0/1:16,0:15:0.98:1,0,93	0/0:15,0:15:9.11:0,9,95	0/1:24,0:29:31.46:34,0,31	0/1:7,0:8:2.77:3,0,36	0/0:15,0:15:5.23:0,5,84	1/1:11,10:21:17.59:161,18,0	1/1:10,0:21:0.89:2,1,0	0/0:29,0:29:6.91:0,7,95	0/0:16,0:16:9.07:0,9,125	0/1:12,2:14:16.33:87,0,16	1/1:9,1:11:10.58:83,11,0	0/0:22,8:27:3.01:0,3,40	1/1:16,0:18:5.44:24,5,0	1/1:8,0:10:1.87:27,2,0	0/0:21,0:22:2.46:0,2,9	0/1:9,0:9:9.29:9,0,46	0/0:20,0:19:21.71:0,22,176	1/1:7,5:11:11.70:163,12,0	0/0:4,0:3:0.47:0,0,1
chr10	46369801	.	GTC	G	2584.98	PASS	AB=1.000;AC=37;AF=0.712;AN=52;BaseQRankSum=10.000;DP=524;FS=9.017;HRun=0;HaplotypeScore=122.2408;InbreedingCoeff=-0.1982;MQ=46.96;MQ0=27;MQRankSum=0.942;QD=5.40;ReadPosRankSum=0.019;VQSLOD=2.4694;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:27,1:26:33.56:238,34,0	0/1:6,0:6:13.53:43,0,14	./.	./.	0/1:14,0:14:35.97:96,0,36	1/1:18,1:19:39.26:294,39,0	1/1:6,24:28:8.95:69,9,0	0/1:23,0:18:71.98:72,0,210	1/1:19,3:20:36.11:249,36,0	0/1:21,0:21:92.92:93,0,242	0/1:22,0:21:1.41:1,0,241	1/1:24,2:26:42.13:303,42,0	1/1:12,1:13:19.71:154,20,0	0/1:18,0:17:59.30:59,0,162	0/1:18,0:17:9.08:9,0,123	0/0:20,0:19:2.70:0,3,128	0/1:29,0:29:99:119,0,218	0/1:18,0:18:97.75:98,0,211	0/1:11,0:11:41.25:41,0,70	1/1:17,0:17:10.63:54,11,0	0/1:31,0:27:0.09:113,0,0	1/1:23,0:23:8.88:63,9,0	1/1:16,0:16:8.59:57,9,0	1/1:4,19:22:18.40:142,18,0	0/1:14,0:14:41.08:41,0,147	0/1:22,0:21:99:106,0,257	1/1:11,0:10:26.85:174,27,0	1/1:4,0:2:5.98:47,6,0
chr10	46369807	.	GTGTGTGTGTC	G	5747.77	PASS	AB=1.000;AC=26;AF=0.481;AN=54;BaseQRankSum=4.322;DP=543;FS=5.023;HRun=0;HaplotypeScore=163.7262;InbreedingCoeff=0.7392;MQ=47.40;MQ0=24;MQRankSum=1.675;QD=19.42;ReadPosRankSum=-1.893;VQSLOD=3.7836;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:29,3:30:40.56:733,41,0	0/0:6,0:6:9.03:0,9,255	0/0:12,0:1:2.60:0,3,10	0/0:20,0:1:2.04:0,2,6	0/1:13,0:13:10.79:11,0,262	1/1:17,1:18:34.64:657,35,0	1/1:32,0:30:15.17:195,15,0	0/0:20,0:17:35.36:0,35,654	1/1:20,3:21:34.38:679,34,0	0/0:21,0:21:26.53:0,27,1247	0/0:22,0:22:18.55:0,19,1075	1/1:23,5:28:35.84:696,36,0	1/1:11,1:12:22.32:504,22,0	0/0:18,0:17:33.03:0,33,937	0/0:19,0:18:39.61:0,40,1319	0/0:23,0:22:30.07:0,30,604	0/0:33,0:32:40.56:0,41,1476	0/0:18,0:18:29.99:0,30,1029	0/1:12,0:12:28.12:274,0,28	1/1:3,14:17:9:131,9,0	1/1:32,0:28:19.71:407,20,0	1/1:3,20:23:4.44:98,4,0	1/1:4,13:17:5.78:187,6,0	1/1:23,2:24:27.09:567,27,0	0/0:13,0:13:7.02:0,7,672	0/0:21,0:21:31.71:0,32,1389	1/1:10,2:11:28.58:609,29,0	./.
chr10	46369815	.	GTC	G	2607.96	PASS	AB=0.995;AC=34;AF=0.630;AN=54;BaseQRankSum=10.892;DP=560;FS=3.125;HRun=0;HaplotypeScore=123.3127;InbreedingCoeff=0.3128;MQ=48.36;MQ0=22;MQRankSum=1.976;QD=5.80;ReadPosRankSum=-1.848;VQSLOD=2.6150;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:33,1:33:48.26:371,48,0	0/0:5,0:5:9.01:0,9,112	0/1:18,0:4:21.13:21,0,21	0/1:24,0:5:1.09:82,0,1	0/1:11,0:11:4.83:5,0,185	1/1:20,0:20:40.07:307,40,0	1/1:33,0:32:17.60:143,18,0	0/0:21,0:18:51.41:0,51,646	1/1:22,1:21:36.85:265,37,0	0/1:20,0:20:25.64:26,0,579	0/0:24,0:24:18.61:0,19,632	1/1:29,1:30:38.76:345,39,0	1/1:11,1:12:22.14:162,22,0	0/1:17,0:16:9.68:10,0,452	0/0:18,0:17:39.13:0,39,638	0/0:23,0:22:18.20:0,18,451	0/1:34,0:33:40.58:41,0,704	0/1:18,0:18:46.57:47,0,432	1/1:14,0:14:22.66:223,23,0	1/1:15,0:15:8.29:50,8,0	1/1:33,0:30:3.90:181,4,0	1/1:21,0:21:2.91:19,3,0	1/1:13,1:14:5.69:39,6,0	1/1:20,5:24:23.97:192,24,0	0/0:18,0:18:2.07:0,2,433	0/1:22,1:23:34.22:34,0,580	1/1:11,0:11:31.34:227,31,0	./.
chr10	46371494	.	T	TTCTC	3880.81	PASS	AB=0.921;AC=50;AF=0.962;AN=52;BaseQRankSum=0.894;DP=776;FS=0.000;HRun=0;HaplotypeScore=161.3428;InbreedingCoeff=-0.0839;MQ=60.84;MQ0=10;MQRankSum=-0.972;QD=5.41;ReadPosRankSum=-0.200;VQSLOD=2.2395;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:31,23:55:3.01:71,3,0	1/1:9,0:9:3.95:50,4,0	./.	./.	1/1:34,0:34:3.01:47,3,0	1/1:21,0:21:12.51:199,13,0	1/1:23,0:23:6.02:65,6,0	1/1:44,0:44:11.53:58,12,0	1/1:29,0:28:9.02:131,9,0	1/1:27,0:26:19.29:188,19,0	1/1:22,0:22:12.03:203,12,0	1/1:46,0:46:14.76:297,15,0	1/1:21,0:18:18.78:211,19,0	1/1:16,0:15:15.02:180,15,0	1/1:27,10:38:15.25:258,15,0	1/1:37,0:36:12.93:235,13,0	1/1:20,0:19:11.96:127,12,0	1/1:9,0:9:9.46:133,9,0	1/1:25,0:24:17.75:189,18,0	1/1:22,0:27:5.74:38,6,0	0/1:40,0:43:51.39:76,0,51	1/1:9,0:13:2.74:12,3,0	1/1:20,0:20:12.51:227,13,0	1/1:11,0:22:2.92:17,3,0	1/1:33,0:33:21.04:339,21,0	1/1:33,0:33:31.25:353,31,0	0/1:26,0:30:48.58:119,0,49	1/1:18,0:17:6.64:59,7,0
chr10	46372177	.	G	GAA	2682.34	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=18.585;DP=820;FS=0.555;HRun=4;HaplotypeScore=145.5469;InbreedingCoeff=0.9999;MQ=64.47;MQ0=2;MQRankSum=0.526;QD=6.90;ReadPosRankSum=4.407;VQSLOD=-0.2664;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,0:55:99:425,118,0	0/0:10,0:10:30.10:0,30,400	0/0:51,1:46:89.81:0,90,1378	0/0:38,0:31:81.55:0,82,990	0/0:34,0:34:99:0,102,1360	1/1:1,0:25:50.33:187,50,0	1/1:2,0:25:51.88:182,52,0	0/0:34,0:34:99:0,99,1248	1/1:3,0:34:64.75:228,65,0	0/0:28,0:28:65.69:0,66,1024	0/0:24,0:24:69.23:0,69,920	1/1:0,0:22:52.15:184,52,0	1/1:3,0:30:62.64:226,63,0	0/0:25,0:25:64.04:0,64,861	0/0:30,0:30:90.28:0,90,1184	0/0:30,0:30:90.30:0,90,1199	0/0:31,0:31:78.25:0,78,1039	0/0:17,0:17:36.11:0,36,480	1/1:3,0:21:44.78:165,45,0	1/1:1,0:16:32.80:126,33,0	1/1:2,0:40:81.97:289,82,0	1/1:2,0:42:90.22:317,90,0	1/1:2,0:21:44.67:158,45,0	1/1:2,0:29:59.52:210,60,0	0/0:28,0:28:84.26:0,84,1104	0/0:33,0:33:90.29:0,90,1200	1/1:0,0:28:62.14:219,62,0	0/0:15,0:15:36.11:0,36,480
chr10	46373079	.	TGCAA	T	8655.84	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=10.385;DP=719;FS=0.000;HRun=0;HaplotypeScore=135.4430;InbreedingCoeff=0.9984;MQ=96.92;MQ0=1;MQRankSum=-8.071;QD=47.82;ReadPosRankSum=2.108;VQSLOD=5.6936;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,31:31:81.27:1497,81,0	0/0:12,0:12:36.12:0,36,1007	0/0:41,0:41:99:0,114,3016	0/0:34,0:34:99:0,99,2396	0/0:12,0:12:36.12:0,36,969	0/0:17,0:16:48.16:0,48,1342	0/0:22,0:22:66.23:0,66,1833	0/0:35,0:35:99:0,102,2687	1/1:2,25:27:63.21:1214,63,0	0/0:25,0:25:72.24:0,72,1950	0/0:12,0:12:33.11:0,33,908	1/1:1,34:35:96.33:1895,96,0	1/1:0,28:28:78.27:1555,78,0	0/0:27,0:27:81.28:0,81,2230	0/0:46,0:46:99:0,135,3715	0/0:37,1:38:54.51:0,55,2999	0/0:29,0:29:84.29:0,84,2350	0/0:22,0:22:66.23:0,66,1830	0/0:24,0:24:69.18:0,69,1806	0/0:26,0:26:78.25:0,78,2052	0/0:40,0:40:99:0,117,3230	1/1:1,13:14:33.11:530,33,0	1/1:0,18:17:42.14:787,42,0	1/1:0,27:27:60.21:1178,60,0	0/0:7,0:7:21.07:0,21,553	0/0:24,0:24:72.24:0,72,1875	0/0:38,0:38:99:0,114,3165	0/0:7,0:7:21.07:0,21,588
chr10	46377024	.	CCA	C	948.13	PASS	AB=0.843;AC=25;AF=0.481;AN=52;BaseQRankSum=5.594;DP=641;FS=0.000;HRun=0;HaplotypeScore=129.9189;InbreedingCoeff=0.4877;MQ=53.52;MQ0=44;MQRankSum=-3.514;QD=3.15;ReadPosRankSum=4.006;VQSLOD=1.7613;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:49:27.74:0,28,264	1/1:5,3:8:6.01:65,6,0	./.	./.	1/1:18,0:17:11.36:56,11,0	0/1:18,7:24:3.03:155,0,3	0/1:20,8:27:17.97:67,0,18	0/0:27,0:26:1.82:0,2,6	0/1:7,0:12:18.34:18,0,65	1/1:24,0:20:8.52:42,9,0	1/1:8,0:7:2.84:14,3,0	0/1:21,0:19:12.37:12,0,144	0/0:11,0:18:9:0,9,78	1/1:14,0:14:17.04:84,17,0	0/1:19,14:34:3.52:254,0,4	1/1:26,0:25:19.89:98,20,0	1/1:21,0:19:5.68:28,6,0	0/0:21,0:18:2.04:0,2,6	0/0:15,0:13:4.23:0,4,26	0/0:15,0:22:14.81:0,15,148	0/0:44,0:39:42.64:0,43,407	0/0:15,0:15:6.01:0,6,69	0/0:21,0:21:19.67:0,20,186	0/0:22,0:35:21:0,21,183	1/1:18,0:18:17.04:84,17,0	1/1:28,0:28:19.89:98,20,0	0/0:15,0:22:21.01:0,21,197	1/1:12,0:12:11.36:56,11,0
chr10	46377029	.	CA	C	41.41	PASS	AB=0.760;AC=6;AF=0.107;AN=56;BaseQRankSum=9.757;DP=673;FS=4.641;HRun=1;HaplotypeScore=135.8718;InbreedingCoeff=-0.1138;MQ=51.47;MQ0=50;MQRankSum=-8.664;QD=0.34;ReadPosRankSum=5.203;VQSLOD=-0.4780;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:51:99:0,122,1537	0/0:7,0:7:16.48:0,16,166	0/0:20,0:7:21.07:0,21,266	0/0:19,0:6:11.65:0,12,127	0/1:18,5:22:24.09:24,0,146	0/0:25,0:23:48.45:0,48,491	0/0:29,0:26:57.07:0,57,637	0/0:31,0:29:46.17:0,46,395	0/0:13,0:13:25.59:0,26,263	0/0:22,3:21:24.44:0,24,264	0/0:11,2:12:12.66:0,13,142	0/0:22,0:19:47.35:0,47,586	0/0:17,0:17:36.10:0,36,429	0/1:11,6:17:20.74:21,0,105	0/0:35,0:34:59.55:0,60,544	0/1:18,8:25:28.42:28,0,186	0/0:21,3:22:17.32:0,17,220	0/0:23,0:20:58.46:0,58,461	0/0:18,0:16:43.53:0,44,422	0/0:24,0:23:48.14:0,48,612	0/0:49,0:43:90.74:0,91,1188	0/0:18,0:16:36.10:0,36,447	0/0:22,0:21:39.11:0,39,509	0/0:37,0:35:81.23:0,81,973	0/1:11,7:18:59.73:60,0,92	0/1:21,7:28:1.23:1,0,299	0/0:27,0:22:48.61:0,49,574	0/1:6,4:10:24.56:25,0,47
chr10	46377031	.	CACACACACA	C	2346.50	PASS	AB=0.799;AC=9;AF=0.161;AN=56;BaseQRankSum=12.134;DP=671;FS=4.623;HRun=0;HaplotypeScore=210.4427;InbreedingCoeff=-0.1934;MQ=51.22;MQ0=51;MQRankSum=-7.089;QD=12.68;ReadPosRankSum=3.875;VQSLOD=2.5276;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:50:99:0,113,2930	0/0:7,0:7:18.06:0,18,395	0/0:20,0:6:18.06:0,18,227	0/0:22,0:7:14.88:0,15,191	0/1:16,3:20:71.81:225,0,72	0/0:24,0:22:51.17:0,51,1241	0/0:31,0:28:66.20:0,66,1315	0/0:31,0:29:70.19:0,70,384	0/0:12,0:12:19.33:0,19,709	0/1:23,3:22:99:153,0,235	0/1:12,1:13:63.98:67,0,64	0/0:20,0:17:42.02:0,42,1188	0/0:18,0:18:33.44:0,33,1021	0/1:11,5:17:99:338,0,105	0/0:35,0:34:69.23:0,69,1596	0/1:18,8:25:99:507,0,112	0/1:21,3:22:99:143,0,226	0/0:23,0:20:41.28:0,41,343	0/0:17,0:15:43.78:0,44,665	0/0:24,0:23:42.61:0,43,1151	0/0:51,0:45:99:0,100,2926	0/0:17,0:15:33.11:0,33,675	0/0:20,0:19:39.13:0,39,1117	0/0:37,0:35:81.27:0,81,2201	0/1:11,6:18:69.54:385,0,70	0/1:23,6:30:99:425,0,297	0/0:25,0:20:44.17:0,44,1288	0/1:5,4:9:59.08:245,0,59
chr10	46377196	.	C	CT	7173.89	PASS	AB=0.643;AC=26;AF=0.464;AN=56;BaseQRankSum=-12.801;DP=643;FS=3.202;HRun=10;HaplotypeScore=67.1480;InbreedingCoeff=0.5772;MQ=69.88;MQ0=0;MQRankSum=-0.360;QD=21.16;ReadPosRankSum=1.137;VQSLOD=5.9560;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,25:29:53.38:752,53,0	1/1:1,10:11:2.42:231,2,0	0/0:12,0:14:28:0,28,202	0/1:9,0:8:4.32:4,0,44	0/0:30,1:34:55.98:0,56,643	1/1:2,21:23:29.32:501,29,0	0/1:4,9:13:16.21:255,0,16	0/0:37,0:42:88.92:0,89,677	1/1:0,22:24:56.21:632,56,0	0/0:32,0:33:82.93:0,83,671	0/0:29,1:30:48.86:0,49,599	0/1:7,17:24:22.79:367,0,23	1/1:3,26:29:44.38:672,44,0	0/0:15,0:15:44.42:0,44,351	1/1:4,20:24:57.14:608,57,0	0/0:15,0:17:40.99:0,41,326	0/0:20,0:24:65.06:0,65,488	0/0:19,0:22:48.98:0,49,378	1/1:6,15:22:45.42:463,45,0	0/1:5,15:22:14.15:436,0,14	1/1:3,11:15:29.70:341,30,0	0/1:4,15:20:7.35:324,0,7	1/1:1,23:25:32.24:533,32,0	1/1:2,19:21:51.13:544,51,0	0/0:15,0:15:35.94:0,36,295	0/0:39,0:41:99:0,100,798	0/1:5,21:27:14.73:510,0,15	0/0:16,1:17:14.78:0,15,317
chr10	46379356	.	G	GCGCACACA	1427.93	PASS	AB=0.876;AC=20;AF=0.370;AN=54;BaseQRankSum=2.212;DP=591;FS=6.029;HRun=0;HaplotypeScore=155.2660;InbreedingCoeff=0.4855;MQ=51.50;MQ0=5;MQRankSum=-2.260;QD=5.53;ReadPosRankSum=-2.977;VQSLOD=1.6898;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:7,25:45:6.02:168,6,0	0/1:11,0:11:8.94:9,0,380	0/0:19,0:6:3:0,3,39	0/1:17,0:8:9.17:9,0,81	0/0:15,0:15:39.07:0,39,787	0/1:6,0:14:0:0,0,0	1/1:18,0:27:17.79:123,18,0	0/0:22,0:22:53.62:0,54,886	1/1:8,1:9:17.46:373,17,0	0/0:24,0:25:75.15:0,75,1519	0/0:13,0:14:30.05:0,30,528	1/1:5,16:25:5.60:157,6,0	0/1:5,1:12:11.87:86,0,12	0/0:21,0:23:63.13:0,63,1360	0/1:23,0:23:88.75:89,0,595	0/0:25,0:25:69.05:0,69,1396	0/0:30,0:37:87.53:0,88,1859	0/0:22,0:26:63.83:0,64,1400	1/1:17,0:15:41.33:429,41,0	1/1:15,0:15:2.97:20,3,0	0/1:15,0:11:0.05:0,0,0	0/0:2,13:17:2.90:0,3,16	1/1:3,18:26:2.87:133,3,0	0/0:7,22:38:0.71:0,1,1	0/0:27,0:34:90.17:0,90,1907	0/0:23,0:23:51.05:0,51,1011	./.	0/0:10,0:9:27.03:0,27,496
chr10	46379549	.	GTCTGTCTGTCTA	G	18993.40	PASS	AB=0.896;AC=48;AF=0.857;AN=56;BaseQRankSum=5.540;DP=731;FS=6.086;HRun=0;HaplotypeScore=243.5502;InbreedingCoeff=0.5029;MQ=54.95;MQ0=11;MQRankSum=-5.300;QD=28.73;ReadPosRankSum=5.591;VQSLOD=3.1009;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:21,2:22:17.98:526,18,0	1/1:7,0:7:8.16:31,8,0	0/0:40,0:25:56.11:0,56,1187	0/0:29,0:23:45.14:0,45,1610	1/1:2,35:37:54.18:1576,54,0	1/1:40,0:39:43.10:165,43,0	0/1:17,0:16:2.80:10,0,3	1/1:33,0:29:56.95:664,57,0	1/1:0,23:23:24.08:817,24,0	1/1:5,25:30:65.84:1651,66,0	1/1:4,21:25:42.14:1305,42,0	1/1:3,26:29:42.14:1460,42,0	1/1:2,14:16:15.05:519,15,0	1/1:0,18:18:14.84:539,15,0	1/1:26,0:26:21.45:79,21,0	1/1:4,29:32:54.19:1920,54,0	1/1:17,2:18:13.15:329,13,0	1/1:3,17:20:0.07:574,0,0	0/1:28,0:27:84.77:243,0,85	1/1:29,1:30:18.36:214,18,0	0/1:32,0:32:3.41:10,0,3	1/1:2,23:25:42.14:1440,42,0	1/1:3,30:33:36.83:1224,37,0	0/1:6,15:20:0:0,0,0	1/1:2,22:24:33.11:1128,33,0	1/1:4,35:39:99:2192,102,0	1/1:23,0:23:41.54:161,42,0	1/1:3,7:10:6.02:216,6,0
chr10	46379553	.	GTCTGTCTA	G	16887.35	PASS	AB=1.000;AC=51;AF=0.911;AN=56;BaseQRankSum=7.860;DP=706;FS=3.224;HRun=0;HaplotypeScore=204.5050;InbreedingCoeff=0.7066;MQ=53.71;MQ0=15;MQRankSum=-4.409;QD=26.43;ReadPosRankSum=5.750;VQSLOD=4.4661;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:20:32.86:365,33,0	1/1:0,8:8:12.04:317,12,0	0/0:39,0:23:56.21:0,56,878	0/0:27,0:22:54.05:0,54,1302	1/1:35,0:35:53.82:788,54,0	1/1:4,35:38:51.18:1381,51,0	1/1:3,14:16:1.01:276,1,0	1/1:28,0:24:56.92:522,57,0	1/1:23,0:23:24.07:436,24,0	1/1:28,0:27:65.91:944,66,0	1/1:23,0:23:42.01:655,42,0	1/1:30,0:29:42.14:792,42,0	1/1:16,0:15:15.05:280,15,0	1/1:18,0:18:14.84:300,15,0	1/1:2,23:25:27.09:722,27,0	1/1:33,0:32:54.19:1061,54,0	1/1:19,0:18:22.77:209,23,0	1/1:18,0:18:0:298,0,0	1/1:5,23:27:68.77:967,69,0	1/1:3,25:28:57.20:1448,57,0	1/1:2,28:30:15.05:363,15,0	1/1:23,0:23:42.12:771,42,0	1/1:32,0:32:36.15:651,36,0	0/1:22,0:20:0:0,0,0	1/1:22,0:22:33.10:603,33,0	1/1:39,0:39:99:1314,101,0	1/1:0,24:24:48.16:1305,48,0	1/1:10,0:10:6.02:120,6,0
chr10	46387772	.	G	GAA	3074.75	PASS	AB=0.683;AC=30;AF=0.536;AN=56;BaseQRankSum=0.607;DP=676;FS=12.170;HRun=14;HaplotypeScore=95.2489;InbreedingCoeff=0.3239;MQ=67.07;MQ0=6;MQRankSum=3.576;QD=6.14;ReadPosRankSum=0.385;VQSLOD=-0.4062;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,28:42:50.36:607,50,0	0/0:11,0:13:17.50:0,17,130	0/1:37,0:20:5.24:5,0,28	0/0:26,0:16:12.63:0,13,111	0/1:9,0:25:9.01:48,0,9	0/1:13,0:18:0.87:1,0,196	0/0:17,0:20:29.18:0,29,262	0/1:15,2:35:10.52:367,0,11	1/1:7,15:25:20.92:207,21,0	1/1:9,1:14:13.75:109,14,0	0/1:10,0:17:15.68:56,0,16	1/1:5,25:33:42.02:500,42,0	0/1:3,9:16:10.70:108,0,11	1/1:12,0:30:23.13:112,23,0	0/0:27,0:28:51.68:0,52,413	0/1:8,0:23:7.86:33,0,8	1/1:9,1:33:17.48:112,17,0	1/1:6,1:24:3.47:78,3,0	0/0:29,0:32:22.81:0,23,211	0/0:23,0:23:24.94:0,25,346	0/0:11,0:12:10.41:0,10,98	1/1:6,13:21:28.12:265,28,0	1/1:4,10:17:20.98:255,21,0	1/1:5,12:17:21.06:264,21,0	0/1:7,0:29:26.84:27,0,40	0/1:8,0:24:42.86:43,0,90	0/0:20,0:21:41.31:0,41,337	0/1:6,1:20:33.80:70,0,34
chr10	46389497	.	TTGCC	T	15163.87	PASS	AB=0.533;AC=25;AF=0.463;AN=54;BaseQRankSum=17.012;DP=620;FS=3.064;HRun=0;HaplotypeScore=109.4150;InbreedingCoeff=0.9386;MQ=54.24;MQ0=9;MQRankSum=1.363;QD=47.99;ReadPosRankSum=0.848;VQSLOD=5.6259;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:4,28:32:3.98:1241,0,4	0/0:13,0:13:39.13:0,39,1081	./.	0/0:4,0:3:9.03:0,9,229	0/0:28,0:27:81.28:0,81,2181	1/1:2,23:25:60.21:1192,60,0	1/1:3,18:17:36.09:679,36,0	0/0:26,0:26:78.27:0,78,2130	1/1:0,16:16:48.16:957,48,0	0/0:30,0:28:78.22:0,78,2050	0/0:20,0:19:57.18:0,57,1509	1/1:0,27:27:66.23:1303,66,0	1/1:1,16:17:45.15:876,45,0	0/0:36,0:36:99:0,108,2930	0/0:20,0:20:57.20:0,57,1594	0/0:24,0:24:72.25:0,72,1979	0/0:21,0:21:63.22:0,63,1755	0/0:22,0:22:63.22:0,63,1680	1/1:2,17:18:54.19:1075,54,0	1/1:0,26:26:75.26:1497,75,0	1/1:2,20:21:45.15:878,45,0	1/1:2,23:24:60.21:1191,60,0	1/1:2,16:18:51.17:979,51,0	1/1:0,30:30:75.26:1498,75,0	0/0:18,0:17:54.19:0,54,1507	0/0:26,0:26:78.27:0,78,2183	1/1:1,37:38:90.31:1797,90,0	0/0:14,0:14:42.14:0,42,1174
chr10	46390326	.	T	TA	5599.54	PASS	AB=0.959;AC=37;AF=0.661;AN=56;BaseQRankSum=-8.768;DP=484;FS=1.338;HRun=11;HaplotypeScore=50.0641;InbreedingCoeff=0.7322;MQ=78.09;MQ0=2;MQRankSum=0.528;QD=16.42;ReadPosRankSum=0.129;VQSLOD=5.3431;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,14:18:9.83:281,10,0	1/1:0,3:3:6.01:61,6,0	0/1:41,0:26:7.42:7,0,80	0/0:20,2:13:0.79:0,1,34	1/1:4,10:14:6.87:238,7,0	0/0:17,0:18:52.74:0,53,391	0/0:9,0:9:23.91:0,24,186	1/1:11,17:28:54.04:532,54,0	0/1:3,0:3:0:0,0,0	1/1:6,17:23:48.10:487,48,0	1/1:1,21:22:57.07:568,57,0	1/1:2,12:15:35.91:349,36,0	1/1:5,6:12:20.88:197,21,0	1/1:3,11:14:27:263,27,0	1/1:6,10:16:36.04:351,36,0	1/1:0,12:12:33.07:335,33,0	1/1:3,13:18:32.74:303,33,0	1/1:3,25:28:66.13:670,66,0	0/0:11,0:12:25.92:0,26,192	0/0:18,0:18:17.38:0,17,318	0/0:8,0:8:17.93:0,18,139	1/1:6,3:9:12.02:121,12,0	1/1:3,11:14:30.53:306,31,0	1/1:0,3:3:6.01:61,6,0	1/1:5,14:18:45.55:452,46,0	0/1:23,3:27:17.76:18,0,407	0/0:27,0:28:73.73:0,74,558	0/0:27,0:27:53.74:0,54,418
chr10	46391608	.	C	CTGT	19076.74	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-16.829;DP=761;FS=2.774;HRun=0;HaplotypeScore=94.4289;InbreedingCoeff=0.9999;MQ=78.17;MQ0=0;MQRankSum=-4.425;QD=51.98;ReadPosRankSum=2.489;VQSLOD=7.2314;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,37:44:90.31:2007,90,0	0/0:11,0:11:30.10:0,30,490	0/0:21,0:20:47.33:0,47,765	0/0:23,0:22:54.18:0,54,827	0/0:24,0:24:69.19:0,69,1076	1/1:3,30:34:75.26:1644,75,0	1/1:3,26:30:75.26:1672,75,0	0/0:50,0:50:99:0,132,1976	1/1:2,17:19:45.15:994,45,0	0/0:29,0:29:78.25:0,78,1231	0/0:25,0:25:75.17:0,75,1077	1/1:0,19:20:51.18:1139,51,0	1/1:0,33:34:87.30:1943,87,0	0/0:28,0:28:75.24:0,75,1201	0/0:29,0:29:81.23:0,81,1270	0/0:38,0:38:99:0,108,1634	0/0:23,0:23:63.20:0,63,1004	0/0:26,0:26:75.24:0,75,1200	1/1:5,17:23:60.15:1163,60,0	1/1:1,23:26:69.17:1475,69,0	1/1:2,25:28:60.21:1309,60,0	1/1:1,25:27:57.09:1208,57,0	1/1:1,21:22:54.19:1205,54,0	1/1:1,27:28:72.25:1608,72,0	0/0:16,0:16:45.14:0,45,710	0/0:27,0:27:78.26:0,78,1250	1/1:3,27:31:78.27:1710,78,0	0/0:24,0:24:60.18:0,60,954
chr10	46392152	.	G	GC	5967.70	PASS	AB=0.588;AC=33;AF=0.589;AN=56;BaseQRankSum=-8.385;DP=570;FS=8.970;HRun=9;HaplotypeScore=62.9360;InbreedingCoeff=0.8531;MQ=83.72;MQ0=0;MQRankSum=-1.235;QD=17.71;ReadPosRankSum=-0.225;VQSLOD=4.4286;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,2:38:65.70:0,66,782	0/0:8,0:8:17.85:0,18,134	0/0:28,0:21:19.71:0,20,235	0/0:23,0:22:9.84:0,10,114	1/1:2,17:20:49.98:488,50,0	1/1:4,0:15:11.36:57,11,0	1/1:5,2:22:34.36:193,34,0	1/1:13,11:25:30.02:295,30,0	0/0:17,0:17:50.95:0,51,432	1/1:7,21:28:60.01:600,60,0	1/1:4,7:11:20.92:199,21,0	0/0:32,0:32:80.88:0,81,692	0/0:14,1:15:2.94:0,3,249	1/1:1,16:17:35.89:398,36,0	0/0:20,0:20:47.80:0,48,400	1/1:2,16:18:33.09:364,33,0	0/1:6,14:20:29.48:364,0,29	1/1:3,9:12:18.05:199,18,0	1/1:5,17:22:31.01:535,31,0	1/1:3,13:16:7.06:251,7,0	1/1:5,25:30:54.15:596,54,0	0/0:15,0:15:29.92:0,30,250	0/0:11,0:11:29.01:0,29,237	0/0:26,0:26:77.97:0,78,675	1/1:7,16:23:30.08:332,30,0	1/1:2,20:22:56.77:563,57,0	1/1:3,15:18:4.33:272,4,0	1/1:6,11:18:24.06:265,24,0
chr10	46392978	.	T	TGCGC	5501.43	PASS	AB=0.842;AC=32;AF=0.571;AN=56;BaseQRankSum=-0.765;DP=514;FS=5.925;HRun=0;HaplotypeScore=145.9236;InbreedingCoeff=0.2838;MQ=51.36;MQ0=13;MQRankSum=2.332;QD=15.24;ReadPosRankSum=6.596;VQSLOD=3.8843;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:21:26.55:0,27,271	1/1:4,5:10:2.66:74,3,0	0/0:18,0:5:8.78:0,9,54	0/0:25,0:8:10.53:0,11,78	0/1:12,22:39:1.60:430,0,2	1/1:8,0:7:5.99:49,6,0	0/1:19,0:20:30.71:31,0,35	0/1:18,0:18:47.53:72,0,48	1/1:6,0:6:0.42:1,0,0	0/1:6,10:18:18.80:344,0,19	1/1:3,15:21:9.02:171,9,0	0/0:23,0:23:24:0,24,276	0/0:20,0:20:3.94:0,4,22	1/1:12,3:15:16.29:343,16,0	0/1:6,10:19:21.97:209,0,22	1/1:6,7:17:11.65:240,12,0	1/1:5,22:28:39.11:882,39,0	1/1:3,26:31:46.91:1114,47,0	0/1:23,0:23:63.95:64,0,155	0/1:13,0:13:5.38:38,0,5	1/1:7,0:7:0.47:1,0,0	0/0:16,0:16:10.65:0,11,144	0/0:8,0:8:6.93:0,7,82	0/0:19,0:19:8.22:0,8,75	1/1:5,9:17:15.05:309,15,0	1/1:7,23:32:57.32:998,57,0	0/1:12,0:10:12.29:56,0,12	1/1:1,5:6:3.01:75,3,0
chr10	46392980	.	T	TGC	3543.37	PASS	AB=1.000;AC=49;AF=0.942;AN=52;BaseQRankSum=-2.012;DP=496;FS=6.791;HRun=0;HaplotypeScore=141.2053;InbreedingCoeff=0.1924;MQ=50.35;MQ0=11;MQRankSum=1.275;QD=7.84;ReadPosRankSum=1.613;VQSLOD=3.0919;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:22,2:21:8.14:252,8,0	1/1:10,0:10:5.98:49,6,0	./.	0/0:21,0:5:3.01:0,3,35	1/1:33,0:33:17.83:153,18,0	1/1:9,0:9:8.73:60,9,0	1/1:23,0:23:0.67:10,1,0	1/1:19,0:19:5.91:38,6,0	0/1:6,0:6:6.55:18,0,7	1/1:18,0:18:23.60:193,24,0	1/1:21,0:21:11.99:124,12,0	1/1:23,0:23:22.51:178,23,0	1/1:8,12:20:2.23:48,2,0	1/1:15,0:15:14.58:172,15,0	1/1:13,0:14:3.28:75,3,0	1/1:14,0:13:14.98:147,15,0	1/1:24,0:26:44.88:380,45,0	1/1:27,0:28:48.01:424,48,0	1/1:25,0:25:16.45:147,16,0	1/1:13,0:18:19.72:110,20,0	./.	1/1:15,0:15:9.85:72,10,0	1/1:9,0:9:7.75:51,8,0	1/1:19,0:19:5.72:47,6,0	1/1:16,0:16:15.02:167,15,0	1/1:30,0:30:62.16:488,62,0	1/1:12,0:10:12.92:89,13,0	1/1:4,0:4:5.99:50,6,0
chr10	46393077	.	TCAGACTTGTAG	T	8416.99	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=12.957;DP=552;FS=61.637;HRun=0;HaplotypeScore=179.5549;InbreedingCoeff=0.9637;MQ=70.18;MQ0=0;MQRankSum=-12.695;QD=40.86;ReadPosRankSum=0.944;VQSLOD=2.4280;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:15,11:26:15.05:438,15,0	0/0:15,0:15:33.11:0,33,1658	0/0:14,0:14:27.09:0,27,1219	0/0:29,0:29:51.32:0,51,2567	0/0:26,0:26:51.18:0,51,2583	1/1:6,5:11:12.04:392,12,0	1/1:2,10:12:21.07:700,21,0	0/0:38,0:38:78.27:0,78,3758	1/1:3,9:12:24.08:800,24,0	0/0:22,0:21:45.14:0,45,2188	0/0:27,0:27:69.24:0,69,3300	1/1:2,12:14:30.10:1000,30,0	1/1:4,9:13:18.06:594,18,0	0/0:18,0:18:36.12:0,36,1993	0/0:30,0:30:75.24:0,75,3909	0/0:17,0:17:45.15:0,45,2493	0/0:30,0:30:81.28:0,81,4238	0/0:25,0:25:63.22:0,63,3183	1/1:8,7:15:21.04:493,21,0	1/1:5,19:24:36.08:1111,36,0	1/1:10,7:17:8.37:293,8,0	1/1:9,13:22:27.09:900,27,0	1/1:6,11:17:17.86:600,18,0	1/1:5,4:9:5.66:194,6,0	0/0:24,0:24:60.21:0,60,3264	0/0:24,0:24:60.21:0,60,3208	1/1:5,9:14:27.09:900,27,0	0/0:7,0:7:18.06:0,18,924
chr10	46396830	.	T	TAC	19872.87	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-16.159;DP=780;FS=0.000;HRun=0;HaplotypeScore=85.0076;InbreedingCoeff=0.9987;MQ=68.24;MQ0=3;MQRankSum=-2.611;QD=34.86;ReadPosRankSum=5.968;VQSLOD=6.7342;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,36:45:86.44:1510,86,0	1/1:2,11:14:30.10:495,30,0	0/0:30,0:29:54.02:0,54,616	0/0:25,0:25:43.26:0,43,593	1/1:7,32:40:87.30:1420,87,0	0/0:23,0:23:63.20:0,63,786	0/0:25,0:25:45.12:0,45,548	1/1:11,32:43:96.24:1451,96,0	1/1:5,23:28:54.18:875,54,0	1/1:4,27:32:79.40:1300,79,0	1/1:6,23:30:28.76:1001,29,0	1/1:1,20:20:51.17:841,51,0	1/1:4,30:34:46.78:1289,47,0	1/1:3,22:25:48.16:791,48,0	1/1:8,31:39:60.20:989,60,0	1/1:4,28:32:75.26:1225,75,0	1/1:3,14:17:20.19:575,20,0	1/1:2,10:12:27.09:424,27,0	0/0:28,0:28:72.21:0,72,879	0/0:27,0:27:78.21:0,78,940	0/0:26,0:25:60.15:0,60,722	1/1:3,25:28:54.18:891,54,0	1/1:2,28:30:69.22:1138,69,0	1/1:1,23:24:63.22:1038,63,0	1/1:2,16:19:33.11:544,33,0	1/1:8,32:40:96.28:1531,96,0	0/0:26,0:26:66.16:0,66,782	1/1:2,13:15:33.11:544,33,0
chr10	46402690	.	AAGG	A	1321.39	PASS	AB=0.962;AC=15;AF=0.268;AN=56;BaseQRankSum=3.392;DP=431;FS=12.462;HRun=0;HaplotypeScore=87.9137;InbreedingCoeff=-0.1582;MQ=70.33;MQ0=0;MQRankSum=-1.559;QD=6.29;ReadPosRankSum=7.591;VQSLOD=0.5466;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:19,1:20:83.45:83,0,167	0/1:9,0:9:18.04:39,0,18	0/0:12,0:5:13.98:0,14,101	0/0:10,0:11:15.10:0,15,165	0/1:13,2:15:38.43:125,0,38	0/0:10,0:10:12.13:0,12,96	0/0:24,0:24:44.76:0,45,613	0/1:11,0:11:59.73:60,0,75	0/0:11,0:11:21.57:0,22,138	0/1:15,0:15:74.54:75,0,121	0/1:10,0:10:25:25,0,99	0/0:11,0:11:23.08:0,23,142	0/0:16,0:16:31.99:0,32,205	0/1:15,0:15:37.40:105,0,37	0/1:20,1:21:3.19:208,0,3	0/1:13,2:15:26.57:143,0,27	0/1:24,0:24:75.98:165,0,76	1/1:18,0:18:31.82:159,32,0	0/0:15,0:15:37.90:0,38,262	0/0:8,0:9:18.47:0,18,166	0/0:40,0:42:30.38:0,30,449	0/0:20,0:20:49.41:0,49,368	0/0:10,0:10:7.10:0,7,93	0/0:17,0:17:21.42:0,21,209	0/1:17,0:17:54.69:98,0,55	0/1:15,0:15:36.24:155,0,36	0/0:12,0:13:6.63:0,7,129	0/1:4,1:5:33.70:44,0,34
chr10	46402691	.	AGGG	A	4477.97	PASS	AB=0.613;AC=33;AF=0.589;AN=56;BaseQRankSum=-10.581;DP=432;FS=13.291;HRun=12;HaplotypeScore=79.2305;InbreedingCoeff=0.5883;MQ=70.20;MQ0=0;MQRankSum=-0.086;QD=14.45;ReadPosRankSum=1.638;VQSLOD=1.8899;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,11:19:17.98:227,18,0	1/1:2,7:9:14.98:171,15,0	0/0:12,0:5:8.03:0,8,56	0/0:10,1:11:5.95:0,6,77	1/1:7,8:15:20.98:247,21,0	0/0:5,0:11:9.28:0,9,77	0/0:11,1:25:0.54:0,1,295	1/1:6,5:11:18.04:218,18,0	0/0:3,0:10:7.02:0,7,17	1/1:6,9:15:21.01:265,21,0	1/1:4,6:10:12.02:152,12,0	0/0:4,0:12:10.79:0,11,62	0/0:7,0:16:10.54:0,11,24	1/1:4,11:15:27.05:341,27,0	1/1:2,18:20:48.11:586,48,0	1/1:7,8:15:21.68:295,22,0	1/1:7,16:24:40.99:509,41,0	1/1:1,17:18:39.04:458,39,0	0/0:9,0:16:13.46:0,13,71	0/0:7,0:9:9.73:0,10,59	0/1:12,2:42:40.05:40,0,48	0/1:11,0:20:0.20:0,0,10	0/1:2,1:10:1.27:32,0,1	0/1:5,1:17:9.98:23,0,10	1/1:5,12:17:33.09:417,33,0	1/1:3,12:15:30.04:379,30,0	0/1:6,1:13:8.20:26,0,8	1/1:3,1:5:8.95:94,9,0
chr10	46402702	.	GGA	G	463	PASS	AB=0.971;AC=12;AF=0.214;AN=56;BaseQRankSum=1.867;DP=439;FS=40.268;HRun=0;HaplotypeScore=83.1726;InbreedingCoeff=0.0226;MQ=72.29;MQ0=0;MQRankSum=1.573;QD=2.74;ReadPosRankSum=5.534;VQSLOD=-0.3515;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:32.91:0,33,211	0/1:9,0:9:15.40:25,0,15	0/0:7,0:4:10.49:0,10,90	0/0:12,0:12:26.85:0,27,226	0/0:13,0:13:25.21:0,25,128	0/0:12,0:12:7.99:0,8,132	0/0:23,0:23:26.59:0,27,350	0/0:12,0:12:3.89:0,4,137	0/1:13,0:13:31.18:31,0,92	0/0:14,0:14:22.09:0,22,193	0/0:10,0:10:17.98:0,18,93	0/1:20,1:21:41.59:42,0,231	0/1:11,1:12:4.67:126,0,5	0/0:18,0:18:21.75:0,22,169	0/0:24,0:24:46.55:0,47,219	0/0:14,0:14:31.86:0,32,168	0/0:23,0:23:45.59:0,46,227	0/0:27,0:27:63.93:0,64,379	0/1:14,0:14:5.91:6,0,130	0/1:10,1:11:24.44:24,0,142	0/1:41,0:41:99:121,0,139	0/1:10,1:11:3.74:77,0,4	0/1:12,0:12:7.70:8,0,87	0/1:16,0:16:39.85:47,0,40	0/0:17,0:17:29.75:0,30,194	0/0:18,0:18:42.69:0,43,254	1/1:7,2:9:20.38:109,20,0	0/0:6,0:6:16.47:0,16,98
chr10	46403915	.	CT	C	9427.91	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=11.369;DP=743;FS=10.084;HRun=3;HaplotypeScore=94.3253;InbreedingCoeff=0.9998;MQ=88.45;MQ0=1;MQRankSum=-5.559;QD=33.31;ReadPosRankSum=2.402;VQSLOD=4.6739;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:93.30:0,93,1318	0/0:13,0:12:36.11:0,36,500	0/0:29,0:29:78.25:0,78,1101	0/0:28,0:28:75.25:0,75,1051	1/1:2,23:25:60.19:744,60,0	0/0:26,0:26:75.24:0,75,1062	0/0:19,0:19:57.19:0,57,821	1/1:2,33:35:99:1215,99,0	0/0:22,0:22:66.20:0,66,929	1/1:0,32:32:93.26:1124,93,0	1/1:5,12:17:36.09:421,36,0	0/0:28,1:28:38.05:0,38,1000	0/0:41,0:41:99:0,114,1621	1/1:0,32:32:96.30:1186,96,0	0/0:36,0:36:99:0,99,1423	1/1:1,32:33:99:1214,99,0	1/1:2,20:22:63.17:771,63,0	1/1:1,28:29:69.22:855,69,0	0/0:23,0:23:63.21:0,63,907	0/0:36,0:36:99:0,105,1494	0/0:24,0:24:72.24:0,72,1037	0/0:27,0:27:75.24:0,75,1061	0/0:20,0:19:57.15:0,57,789	0/0:17,0:17:42.10:0,42,580	1/1:3,15:18:42.13:521,42,0	1/1:1,30:31:84.26:1041,84,0	0/0:36,0:35:99:0,108,1517	1/1:0,9:9:27.08:335,27,0
chr10	46403956	.	TTTTG	T	14075.85	PASS	AB=0.950;AC=41;AF=0.732;AN=56;BaseQRankSum=13.290;DP=736;FS=3.598;HRun=0;HaplotypeScore=146.2020;InbreedingCoeff=0.8930;MQ=72.50;MQ0=4;MQRankSum=-2.166;QD=25.64;ReadPosRankSum=1.021;VQSLOD=4.6887;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,22:31:40.25:901,40,0	1/1:3,6:9:18.06:291,18,0	0/0:31,0:28:9.02:0,9,215	0/0:26,0:23:15.05:0,15,297	1/1:11,11:22:33.10:502,33,0	0/0:32,0:32:81.28:0,81,1946	0/0:29,0:29:60.21:0,60,1404	1/1:27,6:33:24.08:387,24,0	1/1:2,27:30:69.23:1094,69,0	1/1:15,19:33:60.20:969,60,0	1/1:6,13:19:36.12:574,36,0	1/1:9,17:27:41.81:633,42,0	1/1:10,27:37:72.25:1163,72,0	1/1:12,20:33:63.18:990,63,0	1/1:10,21:31:54.18:872,54,0	1/1:8,25:33:75.22:1184,75,0	1/1:16,13:29:36.12:582,36,0	1/1:14,12:26:41.62:617,42,0	0/0:12,0:11:18.06:0,18,416	0/0:27,0:27:51.18:0,51,1232	0/1:18,1:19:9.34:9,0,791	1/1:7,17:24:45.11:698,45,0	1/1:9,10:18:21.07:339,21,0	1/1:8,17:26:45.15:707,45,0	1/1:9,9:18:27.09:428,27,0	1/1:16,21:37:60.20:969,60,0	0/0:29,1:30:14.74:0,15,1394	1/1:7,3:10:12:165,12,0
chr10	46404269	.	G	GA	1818.70	PASS	AC=14;AF=0.280;AN=50;BaseQRankSum=-0.814;DP=376;FS=15.961;HRun=7;HaplotypeScore=54.2929;InbreedingCoeff=0.9331;MQ=37.91;MQ0=43;MQRankSum=-4.224;QD=16.38;ReadPosRankSum=1.136;VQSLOD=2.0964;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:10,15:21:42.13:507,42,0	0/0:8,0:7:8.99:0,9,80	./.	./.	0/0:15,0:15:24.03:0,24,230	0/0:9,0:8:21.03:0,21,202	0/0:17,0:15:36.05:0,36,344	0/0:15,0:15:41.92:0,42,373	1/1:3,4:6:12.04:145,12,0	0/0:11,0:10:24.04:0,24,231	0/0:9,0:9:3:0,3,30	1/1:2,6:7:12.04:145,12,0	1/1:4,10:13:33.06:382,33,0	0/0:20,0:19:42.06:0,42,403	0/0:9,0:9:12.01:0,12,115	0/0:12,0:10:21.03:0,21,203	0/0:22,0:14:27:0,27,260	0/0:24,0:19:36.05:0,36,347	0/0:13,0:13:33.05:0,33,318	0/0:13,0:13:27.02:0,27,260	0/0:16,0:14:21.03:0,21,202	1/1:6,9:15:21.06:248,21,0	1/1:6,11:13:21.06:253,21,0	1/1:9,15:17:27.08:326,27,0	0/0:10,0:8:21.02:0,21,202	0/0:24,0:24:39.04:0,39,376	0/0:13,0:12:30.04:0,30,289	./.
chr10	46404303	.	A	ACC	648.24	PASS	AB=0.983;AC=22;AF=0.393;AN=56;BaseQRankSum=1.287;DP=366;FS=46.345;HRun=0;HaplotypeScore=61.2597;InbreedingCoeff=-0.2433;MQ=44.96;MQ0=85;MQRankSum=-0.684;QD=2.88;ReadPosRankSum=-1.246;VQSLOD=-0.6928;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:10,0:5:29.52:68,0,30	0/1:7,0:5:4.70:53,0,5	0/0:34,0:5:8.05:0,8,76	0/0:34,0:5:0.63:0,1,75	0/1:12,0:11:24.96:25,0,82	0/0:10,0:9:26.97:0,27,280	0/0:13,0:10:25.32:0,25,290	0/1:5,1:6:14.21:62,0,14	1/1:8,0:7:4.69:88,5,0	0/1:7,0:7:39.90:47,0,40	0/1:7,0:5:20.80:21,0,41	0/1:9,0:6:10.13:37,0,10	0/1:10,0:8:22.01:80,0,22	0/1:10,0:8:11.96:12,0,40	0/1:14,0:14:55.89:71,0,56	0/1:11,0:10:18.11:22,0,18	0/1:25,0:13:31.09:31,0,77	0/1:18,0:11:7.95:8,0,64	0/0:14,0:10:20.56:0,21,195	0/0:4,0:3:8.73:0,9,67	0/0:8,0:6:9.03:0,9,113	0/0:5,2:6:1.68:0,2,56	1/1:7,0:4:4.78:29,5,0	1/1:21,0:12:13.80:111,14,0	0/1:8,0:5:1.13:1,0,80	0/1:13,0:11:21.45:21,0,52	0/0:17,0:15:35.88:0,36,393	0/1:20,0:7:22:22,0,25
chr10	46408889	.	C	CT	1490.52	PASS	AB=0.867;AC=8;AF=0.143;AN=56;BaseQRankSum=-8.093;DP=710;FS=0.000;HRun=11;HaplotypeScore=108.9658;InbreedingCoeff=0.7880;MQ=65.98;MQ0=0;MQRankSum=1.202;QD=12.63;ReadPosRankSum=-2.594;VQSLOD=2.7574;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:28:54.23:0,54,496	0/0:11,0:11:22.26:0,22,165	0/1:19,0:15:10.92:11,0,75	0/0:15,0:11:19.42:0,19,128	0/0:27,1:28:34.85:0,35,435	0/0:19,0:19:41.78:0,42,323	0/0:18,0:18:38.82:0,39,302	0/0:37,0:39:73.64:0,74,554	0/0:17,0:17:36.94:0,37,266	0/0:36,0:36:74.16:0,74,593	0/0:24,0:24:37.76:0,38,316	0/0:26,0:26:62.19:0,62,463	0/0:33,0:33:85.44:0,85,647	0/0:19,0:20:46.80:0,47,345	0/0:42,0:42:83.50:0,84,620	0/0:44,0:45:97.55:0,98,739	0/0:25,0:26:64.29:0,64,468	0/0:32,0:33:85.69:0,86,652	1/1:5,19:23:51.08:509,51,0	1/1:7,19:27:42.62:436,43,0	0/1:14,8:22:1.08:308,0,1	0/0:30,0:30:67.48:0,67,508	0/0:14,0:14:27.92:0,28,192	0/0:19,0:19:47.78:0,48,364	0/0:27,0:27:41.10:0,41,399	0/0:24,1:25:23.28:0,23,359	1/1:5,19:25:38.91:380,39,0	0/0:17,0:17:41.75:0,42,317
chr10	46410082	.	G	GAAC	3125.44	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-2.636;DP=657;FS=4.103;HRun=0;HaplotypeScore=168.9908;InbreedingCoeff=0.9893;MQ=62.64;MQ0=0;MQRankSum=-10.662;QD=39.07;ReadPosRankSum=-2.596;VQSLOD=4.0228;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:66.16:0,66,895	0/0:14,0:14:36.12:0,36,520	0/0:20,0:18:36.09:0,36,452	0/0:14,0:14:24.08:0,24,325	0/0:30,0:30:72.22:0,72,1005	0/0:21,0:21:48.16:0,48,694	0/0:19,0:19:36.05:0,36,459	0/0:29,0:29:54.17:0,54,764	0/0:14,0:14:30.10:0,30,433	0/0:22,0:22:57.16:0,57,771	0/0:20,0:20:39.11:0,39,526	0/0:24,0:24:60.18:0,60,832	0/0:24,0:24:51.17:0,51,738	0/0:17,0:17:24.08:0,24,347	0/0:34,0:33:78.25:0,78,1095	0/0:42,0:42:99:0,114,1649	0/0:30,0:30:63.19:0,63,892	0/0:20,0:20:32.67:0,33,434	1/1:9,11:20:39.13:797,39,0	1/1:5,14:20:51.17:1002,51,0	1/1:11,3:14:12.02:198,12,0	0/0:28,0:28:69.23:0,69,998	0/0:31,0:31:63.14:0,63,850	0/0:36,0:35:81.22:0,81,1131	0/0:22,0:22:57.19:0,57,825	0/0:27,0:27:69.22:0,69,982	1/1:4,22:26:66.23:1287,66,0	0/0:8,0:8:24.05:0,24,309
chr10	46412753	.	G	GACT	5463.23	PASS	AB=0.862;AC=23;AF=0.411;AN=56;BaseQRankSum=16.514;DP=679;FS=138.789;HRun=0;HaplotypeScore=264.4902;InbreedingCoeff=-0.6915;MQ=85.32;MQ0=0;MQRankSum=-13.251;QD=9.57;ReadPosRankSum=-1.947;VQSLOD=1.5289;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:28.20:0,28,850	0/1:6,1:7:99:116,0,243	0/0:32,0:32:44.20:0,44,1422	0/0:30,0:30:81.23:0,81,1361	0/1:38,10:48:99:456,0,1612	0/1:23,6:29:99:426,0,774	0/1:17,2:19:90.87:91,0,683	0/1:37,9:46:99:526,0,1484	0/1:20,3:23:99:262,0,869	0/1:23,6:29:99:343,0,995	0/1:22,9:31:99:484,0,993	0/1:23,2:25:99:116,0,938	0/1:20,4:24:99:219,0,771	0/1:15,3:18:99:164,0,570	0/1:15,1:16:27.64:28,0,636	0/1:38,7:45:99:480,0,1650	0/1:19,1:20:12.78:13,0,881	0/1:11,1:12:12.13:12,0,489	0/0:18,0:18:51.09:0,51,864	0/1:21,5:26:99:271,0,704	0/1:9,1:10:41.88:42,0,396	0/1:17,4:21:99:285,0,627	0/1:15,5:20:99:222,0,657	0/0:10,0:10:30.10:0,30,509	0/1:16,5:21:99:319,0,628	0/1:34,4:38:99:284,0,1437	0/1:36,1:37:99:108,0,1482	0/1:3,3:6:89.17:196,0,89
chr10	46412760	.	A	AC	3115.92	PASS	AB=0.818;AC=21;AF=0.375;AN=56;BaseQRankSum=16.799;DP=632;FS=144.086;HRun=0;HaplotypeScore=191.2552;InbreedingCoeff=-0.6045;MQ=81.90;MQ0=0;MQRankSum=-12.767;QD=6.13;ReadPosRankSum=4.016;VQSLOD=0.8136;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:45.15:0,45,622	0/1:6,1:7:25.53:26,0,230	0/0:30,0:29:87.22:0,87,1126	0/0:24,0:24:69.19:0,69,931	0/1:36,11:47:99:237,0,1174	0/1:18,9:27:99:339,0,628	0/1:15,3:18:72.96:73,0,528	0/1:30,11:41:99:274,0,1012	0/1:19,3:22:76.73:77,0,684	0/1:22,6:28:99:122,0,795	0/1:21,9:30:99:286,0,712	0/1:20,4:24:99:114,0,721	0/1:16,6:22:99:217,0,526	0/1:14,4:18:99:136,0,441	0/1:11,2:13:55.25:55,0,380	0/1:35,7:42:99:198,0,1324	0/0:18,1:19:8.24:0,8,647	0/0:8,1:9:3.71:0,4,307	0/0:17,1:18:26.10:0,26,638	0/1:14,8:22:99:281,0,404	0/1:8,1:9:2.96:3,0,250	0/1:15,6:21:99:115,0,485	0/1:14,6:20:99:212,0,478	0/0:7,0:7:21.07:0,21,294	0/1:15,6:21:99:219,0,518	0/1:30,6:36:99:144,0,1030	0/1:30,3:33:26.41:26,0,1144	0/1:4,3:7:99:120,0,135
chr10	46412763	.	A	AT	3560.47	PASS	AB=0.835;AC=23;AF=0.411;AN=56;BaseQRankSum=17.044;DP=662;FS=155.567;HRun=1;HaplotypeScore=268.4551;InbreedingCoeff=-0.6907;MQ=79.44;MQ0=0;MQRankSum=-12.610;QD=6.18;ReadPosRankSum=4.011;VQSLOD=0.2342;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:45.13:0,45,568	0/1:6,1:7:26.20:26,0,176	0/0:29,0:28:81.15:0,81,989	0/0:24,0:24:65.91:0,66,747	0/1:37,11:48:99:251,0,1072	0/1:20,9:29:99:359,0,570	0/1:15,3:18:63.34:63,0,488	0/1:28,11:41:99:308,0,886	0/1:21,3:24:99:108,0,634	0/1:22,6:28:89.93:90,0,735	0/1:23,9:32:99:264,0,655	0/1:22,4:26:99:149,0,663	0/1:17,6:23:99:205,0,484	0/1:16,4:20:99:164,0,405	0/1:12,2:14:52.35:52,0,345	0/1:37,7:44:99:181,0,1209	0/1:17,1:18:33.87:34,0,568	0/0:8,1:9:6.29:0,6,291	0/1:17,1:19:8.07:8,0,531	0/1:19,8:27:99:306,0,368	0/1:6,1:7:6.63:7,0,176	0/1:19,6:25:99:214,0,442	0/1:17,6:23:99:238,0,444	0/0:7,0:7:21.07:0,21,273	0/1:17,6:23:99:204,0,462	0/1:30,6:36:99:195,0,874	0/1:32,3:35:23.45:23,0,1014	0/1:6,3:9:99:108,0,142
chr10	46413812	.	T	TC	25955.77	PASS	AB=0.679;AC=54;AF=0.964;AN=56;BaseQRankSum=-3.179;DP=679;FS=2.037;HRun=2;HaplotypeScore=107.9399;InbreedingCoeff=-0.0317;MQ=79.28;MQ0=0;MQRankSum=-3.294;QD=38.23;ReadPosRankSum=2.590;VQSLOD=4.8862;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,40:41:99:1615,114,0	1/1:0,11:11:33.11:475,33,0	0/1:7,17:24:5.30:405,0,5	0/1:12,5:17:12.33:289,0,12	1/1:3,30:34:90.30:1277,90,0	1/1:1,14:15:42.10:572,42,0	1/1:0,28:28:78.26:1123,78,0	1/1:4,23:27:69.21:975,69,0	1/1:3,19:22:63.15:858,63,0	1/1:2,19:21:57.19:820,57,0	1/1:1,12:13:39.09:538,39,0	1/1:1,27:28:81.27:1165,81,0	1/1:0,19:19:57.19:820,57,0	1/1:1,29:30:81.27:1158,81,0	1/1:1,38:39:99:1468,102,0	1/1:0,33:33:93.27:1307,93,0	1/1:0,31:31:93.31:1339,93,0	1/1:0,15:15:45.15:648,45,0	1/1:4,13:17:45.15:644,45,0	1/1:2,20:22:66.18:909,66,0	1/1:2,42:44:99:1598,111,0	1/1:0,18:18:51.17:734,51,0	1/1:0,23:23:63.21:906,63,0	1/1:1,36:37:96.32:1383,96,0	1/1:0,22:22:60.20:857,60,0	1/1:0,21:21:63.21:907,63,0	1/1:0,18:18:54.18:776,54,0	1/1:0,9:9:27.09:389,27,0
chr10	46414291	.	A	AG	21648.74	PASS	AB=0.958;AC=53;AF=0.946;AN=56;BaseQRankSum=1.310;DP=765;FS=0.000;HRun=2;HaplotypeScore=171.3629;InbreedingCoeff=0.6474;MQ=83.75;MQ0=0;MQRankSum=-9.847;QD=29.45;ReadPosRankSum=3.958;VQSLOD=4.3887;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:36,14:50:99:1561,132,0	1/1:9,4:13:38.51:423,39,0	0/1:22,1:22:27.95:28,0,445	0/0:30,0:30:75.02:0,75,805	1/1:16,8:24:50.99:573,51,0	1/1:9,3:12:32.94:359,33,0	1/1:30,12:42:99:1256,118,0	1/1:21,8:29:87.12:1004,87,0	1/1:18,9:27:68.94:809,69,0	1/1:18,5:23:69.12:793,69,0	1/1:16,3:19:47.90:552,48,0	1/1:24,6:30:74.24:803,74,0	1/1:17,8:25:71.82:758,72,0	1/1:24,5:29:82.62:899,83,0	1/1:21,12:33:92.69:1011,93,0	1/1:35,9:44:99:1416,129,0	1/1:18,6:24:47.53:540,48,0	1/1:18,6:24:72.07:819,72,0	1/1:8,16:24:69.03:709,69,0	1/1:17,7:24:68.82:747,69,0	1/1:41,7:48:99:1645,132,0	1/1:15,7:22:61.39:620,61,0	1/1:12,9:21:59.87:667,60,0	1/1:29,7:35:80.65:891,81,0	1/1:14,5:19:54:611,54,0	1/1:22,5:27:60.20:951,60,0	1/1:28,6:34:84.36:937,84,0	1/1:9,0:9:24.05:264,24,0
chr10	46414293	.	GA	G	13902.71	PASS	AB=0.958;AC=53;AF=0.946;AN=56;BaseQRankSum=7.670;DP=753;FS=3.623;HRun=1;HaplotypeScore=195.0383;InbreedingCoeff=0.7285;MQ=82.15;MQ0=0;MQRankSum=-8.188;QD=19.12;ReadPosRankSum=6.028;VQSLOD=5.0813;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:49,0:49:99:1013,124,0	1/1:13,0:13:33.84:245,34,0	0/1:22,1:22:6.35:6,0,459	0/0:26,0:26:61.22:0,61,798	1/1:24,0:24:48.39:370,48,0	1/1:11,0:11:31.09:234,31,0	1/1:40,0:40:92.08:747,92,0	1/1:27,2:29:80.24:631,80,0	1/1:27,0:27:54.53:481,55,0	1/1:25,0:25:52.24:534,52,0	1/1:19,0:19:33.86:353,34,0	1/1:29,0:29:61.35:522,61,0	1/1:24,0:24:67.47:496,67,0	1/1:30,0:30:66.74:583,67,0	1/1:33,0:33:84.73:631,85,0	1/1:41,2:43:99:979,123,0	1/1:21,0:21:43.80:370,44,0	1/1:24,0:24:67.93:507,68,0	1/1:26,0:26:44.12:373,44,0	1/1:24,0:24:63:465,63,0	1/1:49,0:49:99:1096,126,0	1/1:22,0:22:48.45:383,48,0	1/1:21,0:21:55.70:425,56,0	1/1:34,0:33:69.86:591,70,0	1/1:19,0:19:45.42:393,45,0	1/1:27,0:27:58.16:671,58,0	1/1:31,1:32:67.13:615,67,0	1/1:9,0:9:23.78:189,24,0
chr10	46414295	.	GA	G	16590.35	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=5.651;DP=741;FS=0.000;HRun=3;HaplotypeScore=183.0876;InbreedingCoeff=0.9985;MQ=82.00;MQ0=0;MQRankSum=-9.737;QD=23.94;ReadPosRankSum=4.799;VQSLOD=4.1342;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:36,12:48:99:1121,119,0	1/1:10,3:13:33.69:275,34,0	0/0:22,0:21:54.09:0,54,626	0/0:26,0:26:69.68:0,70,885	1/1:14,9:23:41.36:366,41,0	1/1:8,3:11:29.40:275,29,0	1/1:26,13:39:99:948,104,0	1/1:19,9:28:71.72:715,72,0	1/1:17,9:26:52.99:553,53,0	1/1:17,8:25:74.83:750,75,0	1/1:15,5:20:53.06:519,53,0	1/1:21,8:29:77.62:727,78,0	1/1:15,7:22:61.13:506,61,0	1/1:24,6:30:79.22:730,79,0	1/1:18,13:31:78.37:689,78,0	1/1:32,10:42:99:1092,118,0	1/1:15,6:21:48.94:480,49,0	1/1:19,5:24:65.30:601,65,0	1/1:9,16:25:65.34:566,65,0	1/1:17,8:25:64.33:573,64,0	1/1:42,8:50:99:1223,120,0	1/1:15,6:21:49.36:424,49,0	1/1:11,7:18:40.60:359,41,0	1/1:27,8:34:85.32:824,85,0	1/1:14,5:19:50.34:488,50,0	1/1:21,5:26:77.52:816,78,0	1/1:26,7:33:73.51:718,74,0	1/1:9,0:9:24.05:252,24,0
chr10	46417138	.	C	CCCTTGTT	19174.04	PASS	AB=0.915;AC=25;AF=0.446;AN=56;BaseQRankSum=-4.186;DP=602;FS=0.340;HRun=0;HaplotypeScore=134.0626;InbreedingCoeff=0.6403;MQ=83.15;MQ0=0;MQRankSum=-15.955;QD=59.73;ReadPosRankSum=-2.030;VQSLOD=4.5492;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,120,2847	0/0:5,0:5:9.01:0,9,171	0/0:30,0:30:63.15:0,63,1348	0/0:19,0:19:39.60:0,40,900	1/1:2,12:15:38.89:989,39,0	0/0:21,0:21:48.16:0,48,1158	0/0:24,0:24:57.18:0,57,1304	1/1:19,20:41:93.29:2841,93,0	0/0:15,0:15:39.13:0,39,949	1/1:6,13:21:48.14:1619,48,0	1/1:4,8:13:27.09:747,27,0	0/0:23,0:23:63.22:0,63,1456	0/0:22,0:22:51.18:0,51,1244	1/1:8,17:27:57.20:1939,57,0	0/0:25,0:25:69.24:0,69,1647	0/1:7,20:27:7.33:2303,0,7	1/1:4,12:16:27.09:1037,27,0	1/1:7,10:18:27.09:981,27,0	0/1:22,0:22:99:450,0,441	0/1:14,0:14:22.67:452,0,23	0/1:19,0:19:99:381,0,148	0/0:13,0:13:39.13:0,39,919	0/0:20,0:20:54.17:0,54,1233	0/0:19,0:19:51.18:0,51,1237	1/1:4,21:28:66.18:2403,66,0	1/1:6,13:20:45.13:1503,45,0	0/1:31,0:30:99:1021,0,108	1/1:3,4:8:15.05:508,15,0
chr10	46417144	.	T	TTCCTGAG	12875.87	PASS	AB=1.000;AC=22;AF=0.393;AN=56;BaseQRankSum=8.461;DP=591;FS=0.000;HRun=0;HaplotypeScore=158.1846;InbreedingCoeff=0.3982;MQ=84.17;MQ0=0;MQRankSum=-16.608;QD=41.54;ReadPosRankSum=1.191;VQSLOD=4.6363;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,117,2807	0/0:5,0:5:6.02:0,6,144	0/0:31,0:31:57.18:0,57,1196	0/0:18,0:18:33.58:0,34,742	0/1:16,0:15:63.69:352,0,64	0/0:19,0:19:45.14:0,45,1034	0/0:25,0:25:63.22:0,63,1468	0/1:39,0:39:77.50:1130,0,78	0/0:15,0:15:42.13:0,42,960	0/1:22,0:22:99:670,0,203	0/1:11,0:11:63.04:284,0,63	0/0:22,0:22:48.16:0,48,1132	0/0:20,0:20:54.17:0,54,1249	1/1:23,0:23:33.17:909,33,0	0/0:27,0:27:66.20:0,66,1470	0/1:25,0:25:68.13:1066,0,68	1/1:17,0:17:33.11:653,33,0	1/1:16,0:16:27.98:501,28,0	1/1:11,10:23:45.11:1288,45,0	1/1:9,7:16:30.10:1125,30,0	1/1:10,9:19:24.01:801,24,0	0/0:16,0:16:39.13:0,39,918	0/0:20,0:20:48.16:0,48,1110	0/0:19,0:19:42.14:0,42,988	0/1:30,0:30:17.57:1153,0,18	0/1:17,0:17:99:632,0,100	1/1:7,21:30:57.20:2097,57,0	0/1:6,0:6:8.97:215,0,9
chr10	46417221	.	C	CT	2948.44	PASS	AB=0.913;AC=45;AF=0.804;AN=56;BaseQRankSum=-0.691;DP=547;FS=8.454;HRun=16;HaplotypeScore=104.3812;InbreedingCoeff=0.0904;MQ=65.67;MQ0=0;MQRankSum=-0.846;QD=5.59;ReadPosRankSum=-2.056;VQSLOD=1.6537;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:35,4:40:32.56:309,33,0	0/1:9,0:10:3.31:3,0,55	0/1:17,0:14:0.33:0,0,24	0/1:13,0:8:9.74:10,0,22	1/1:12,7:20:27.24:203,27,0	1/1:18,0:16:29.65:140,30,0	1/1:20,0:20:30.34:142,30,0	1/1:15,7:22:17.87:131,18,0	1/1:15,0:15:14.26:92,14,0	0/1:23,1:24:2.21:62,0,2	0/1:10,1:11:12.78:76,0,13	1/1:9,4:19:9.25:58,9,0	1/1:23,1:23:35.14:242,35,0	1/1:20,2:22:20.53:138,21,0	0/1:27,0:27:20.21:35,0,20	0/1:17,0:17:7.77:39,0,8	0/1:7,3:15:4.94:50,0,5	1/1:14,3:17:26.75:194,27,0	1/1:22,0:22:19.63:116,20,0	1/1:11,3:14:2.99:105,3,0	0/1:6,0:11:8.67:9,0,10	1/1:10,7:17:14.69:82,15,0	0/0:13,0:20:0.37:0,0,45	1/1:19,2:22:23.70:177,24,0	1/1:21,5:25:33.60:234,34,0	1/1:17,1:20:16.78:92,17,0	1/1:23,1:25:28.70:178,29,0	1/1:13,4:17:25.33:171,25,0
chr10	46420920	.	GTTTTTTTTT	G	13269.25	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=15.677;DP=675;FS=4.094;HRun=9;HaplotypeScore=207.9543;InbreedingCoeff=0.9909;MQ=66.55;MQ0=5;MQRankSum=-11.695;QD=58.45;ReadPosRankSum=0.636;VQSLOD=1.0254;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:84.23:0,84,3584	0/0:6,0:6:18.01:0,18,447	0/0:44,0:17:35.76:0,36,962	0/0:35,0:17:14.84:0,15,329	1/1:0,35:35:89.82:1581,90,0	0/0:32,0:32:78.23:0,78,3305	0/0:25,0:25:57.64:0,58,2123	1/1:0,28:28:82.36:1460,82,0	0/0:27,0:27:81.26:0,81,3157	1/1:0,27:27:69.21:1761,69,0	1/1:0,21:21:48.16:1116,48,0	0/0:21,0:21:60.19:0,60,2394	0/0:19,0:21:60.20:0,60,2374	1/1:7,12:19:57.11:1308,57,0	0/0:29,0:29:87.26:0,87,3062	1/1:6,13:19:57.16:1345,57,0	1/1:8,16:24:68.78:1300,69,0	1/1:2,4:6:18.04:414,18,0	0/0:30,0:29:87.28:0,87,3743	0/0:32,0:32:96.28:0,96,3840	0/0:17,0:17:51.10:0,51,1860	0/0:28,0:28:84.23:0,84,3506	0/0:20,0:21:54.12:0,54,2232	0/0:20,0:20:60.21:0,60,2583	1/1:5,11:16:48.16:1114,48,0	1/1:0,28:28:74.91:1581,75,0	0/0:31,0:31:93.32:0,93,4034	1/1:2,2:4:12.04:291,12,0
chr10	46420930	.	GTT	G	2608.41	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=16.805;DP=684;FS=0.763;HRun=13;HaplotypeScore=163.3781;InbreedingCoeff=0.9522;MQ=66.40;MQ0=5;MQRankSum=-13.570;QD=11.19;ReadPosRankSum=1.458;VQSLOD=0.9270;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:84.24:0,84,1159	0/0:5,0:5:12.04:0,12,173	0/0:45,0:18:11.45:0,11,147	0/0:31,0:14:4.92:0,5,48	1/1:16,17:36:39.31:240,39,0	0/0:7,0:31:66.08:0,66,631	0/0:10,0:24:33.07:0,33,358	1/1:19,9:30:38.13:262,38,0	0/0:25,0:28:65.62:0,66,845	1/1:8,18:27:56.43:411,56,0	1/1:8,15:23:42.14:279,42,0	0/0:22,0:23:51.17:0,51,711	0/0:21,0:21:45.15:0,45,626	1/1:5,12:17:21.65:261,22,0	0/0:26,0:27:59.85:0,60,827	1/1:6,12:19:46.69:320,47,0	1/1:7,16:23:43.58:298,44,0	1/1:1,4:5:11.97:95,12,0	0/0:30,0:31:86.67:0,87,1111	0/0:29,0:32:85.77:0,86,1089	0/0:14,0:14:39.08:0,39,490	0/0:26,0:26:66.16:0,66,865	0/0:20,0:22:44.36:0,44,639	0/0:23,0:23:57.18:0,57,806	1/1:10,10:21:44.79:290,45,0	1/1:12,14:28:47.09:326,47,0	0/0:33,1:35:54.74:0,55,1057	1/1:2,2:4:5.94:48,6,0
chr10	46422833	.	GCCT	G	9139.56	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=9.988;DP=643;FS=8.048;HRun=0;HaplotypeScore=101.2128;InbreedingCoeff=0.9997;MQ=82.70;MQ0=0;MQRankSum=-3.841;QD=37.77;ReadPosRankSum=3.732;VQSLOD=5.7476;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:72.23:0,72,1496	0/0:10,0:10:27.09:0,27,574	0/0:26,0:26:60.18:0,60,1112	0/0:33,0:34:81.27:0,81,1601	1/1:1,18:19:51.17:782,51,0	0/0:19,0:19:51.18:0,51,1089	0/0:36,0:36:87.30:0,87,1845	1/1:6,13:19:39.13:598,39,0	0/0:18,0:18:45.15:0,45,948	1/1:2,21:23:63.21:966,63,0	1/1:3,14:17:36.12:546,36,0	0/0:22,0:22:66.23:0,66,1390	0/0:10,0:10:30.10:0,30,640	1/1:1,16:17:39.13:598,39,0	0/0:26,0:26:69.24:0,69,1459	1/1:3,24:27:60.20:920,60,0	1/1:0,21:21:54.18:828,54,0	1/1:2,31:33:84.29:1288,84,0	0/0:24,0:24:60.21:0,60,1275	0/0:22,0:22:63.20:0,63,1282	0/0:38,0:38:99:0,114,2430	0/0:13,0:13:33.11:0,33,703	0/0:23,0:23:63.21:0,63,1276	0/0:30,0:30:81.26:0,81,1671	1/1:1,32:33:87.29:1325,87,0	1/1:2,16:18:45.15:690,45,0	0/0:22,0:22:57.17:0,57,1124	1/1:0,15:15:39.13:598,39,0
chr10	46423712	.	AAG	A	1502.51	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.670;DP=807;FS=3.798;HRun=0;HaplotypeScore=103.4401;InbreedingCoeff=0.9096;MQ=81.63;MQ0=2;MQRankSum=-1.553;QD=31.30;ReadPosRankSum=1.375;VQSLOD=5.9013;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,105,1796	1/1:3,22:25:3.99:774,4,0	0/0:41,0:36:86.79:0,87,1473	0/0:74,0:59:99:0,129,2322	0/0:19,0:19:51.14:0,51,864	0/0:19,0:19:54.10:0,54,966	0/0:36,0:36:99:0,108,1952	0/0:45,0:45:99:0,123,2179	0/0:29,0:29:87.30:0,87,1580	0/0:25,0:25:75.26:0,75,1389	0/0:16,0:16:48.16:0,48,892	0/0:37,0:37:99:0,111,2057	0/0:25,0:25:72.23:0,72,1302	0/0:35,0:35:99:0,105,1910	1/1:0,23:23:57.19:839,57,0	0/0:43,0:43:99:0,129,2353	0/0:27,0:27:81.22:0,81,1396	0/0:25,0:25:69.24:0,69,1292	0/0:20,0:20:57.20:0,57,1036	0/0:24,0:24:72.23:0,72,1293	0/0:50,0:50:99:0,144,2625	0/0:31,0:31:87.30:0,87,1617	0/0:17,0:17:48.16:0,48,893	0/0:23,0:23:66.23:0,66,1227	0/0:18,0:18:48.15:0,48,862	0/0:21,0:21:63.22:0,63,1162	0/0:19,0:19:54.19:0,54,1009	0/0:5,0:5:15.05:0,15,281
chr10	46424940	.	TC	T	5962.94	PASS	AB=0.875;AC=48;AF=0.889;AN=54;BaseQRankSum=-5.081;DP=491;FS=62.853;HRun=10;HaplotypeScore=77.9246;InbreedingCoeff=0.5066;MQ=77.58;MQ0=1;MQRankSum=-1.592;QD=13.31;ReadPosRankSum=2.624;VQSLOD=-0.3851;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,17:20:47.98:416,48,0	./.	0/0:26,0:20:18.66:0,19,188	0/0:13,0:9:6.60:0,7,47	1/1:8,9:18:22.32:226,22,0	1/1:6,10:16:29.97:256,30,0	1/1:10,12:22:38.79:321,39,0	1/1:9,20:29:50.43:415,50,0	1/1:4,7:11:23.97:208,24,0	1/1:5,18:23:50.58:409,51,0	1/1:8,7:15:19.53:159,20,0	1/1:11,12:23:21.76:317,22,0	0/1:14,7:21:41.94:152,0,42	1/1:11,5:16:27.04:202,27,0	1/1:8,24:32:23.69:547,24,0	1/1:13,12:25:7.74:233,8,0	1/1:7,10:17:35.48:283,35,0	1/1:11,9:20:35.58:290,36,0	1/1:7,0:7:14.41:78,14,0	1/1:9,0:9:14.16:68,14,0	1/1:16,0:16:17.03:82,17,0	1/1:7,11:18:15.06:244,15,0	1/1:4,6:10:11.94:104,12,0	1/1:6,17:23:35.10:416,35,0	1/1:2,5:7:15.88:132,16,0	1/1:10,7:18:28.53:236,29,0	0/1:25,0:25:31.33:116,0,31	1/1:2,4:6:5.98:52,6,0
chr10	46424949	.	CCA	C	1144.06	PASS	AB=0.805;AC=8;AF=0.143;AN=56;BaseQRankSum=-5.335;DP=521;FS=2.020;HRun=0;HaplotypeScore=106.4597;InbreedingCoeff=0.6610;MQ=76.65;MQ0=1;MQRankSum=1.397;QD=13.30;ReadPosRankSum=-0.943;VQSLOD=3.0443;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:59.94:0,60,336	0/0:2,0:2:3:0,3,27	0/0:25,0:18:31.10:0,31,415	0/0:15,0:10:7.82:0,8,101	0/0:16,0:16:40.31:0,40,210	0/0:16,0:16:35.17:0,35,178	0/0:27,0:27:35.70:0,36,272	0/0:33,0:33:63.51:0,64,353	0/0:18,0:18:41.66:0,42,245	0/0:24,0:24:7.47:0,7,180	0/0:18,0:18:35.61:0,36,212	0/0:21,0:21:36.72:0,37,146	0/0:23,0:23:45.03:0,45,292	0/0:14,0:14:15.02:0,15,128	0/0:34,0:34:74.72:0,75,359	0/0:17,0:17:30.93:0,31,136	0/0:18,0:18:32.95:0,33,191	0/0:16,0:16:21.53:0,22,139	1/1:2,9:11:29.97:325,30,0	1/1:0,8:8:20.96:251,21,0	1/1:0,18:18:18.06:255,18,0	0/1:24,0:24:3.29:3,0,219	0/0:10,0:10:16.85:0,17,98	0/0:22,0:22:34.38:0,34,202	0/0:13,0:13:28.97:0,29,178	0/0:20,0:20:38.68:0,39,203	0/1:9,16:25:29.26:457,0,29	0/0:7,0:7:16.84:0,17,101
chr10	46430536	.	G	GA	3985.38	PASS	AB=0.532;AC=17;AF=0.304;AN=56;BaseQRankSum=-10.042;DP=581;FS=3.289;HRun=9;HaplotypeScore=61.6853;InbreedingCoeff=0.8693;MQ=70.94;MQ0=0;MQRankSum=0.735;QD=22.26;ReadPosRankSum=2.805;VQSLOD=4.6903;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,29:37:25.93:725,26,0	1/1:1,3:4:8.99:87,9,0	0/0:12,0:12:2.85:0,3,138	0/0:12,0:12:23.89:0,24,190	0/0:18,0:18:49.79:0,50,417	0/0:25,0:25:59.97:0,60,521	0/0:22,0:22:56.94:0,57,486	0/0:29,0:30:76.92:0,77,648	1/1:0,13:13:36.10:398,36,0	0/0:22,0:23:62.01:0,62,524	0/0:9,0:9:20.99:0,21,182	0/1:3,22:25:14.81:534,0,15	1/1:2,15:17:17:376,17,0	0/0:29,0:29:59.96:0,60,520	1/1:3,19:23:41.17:492,41,0	0/0:25,0:25:71.95:0,72,619	0/0:28,0:31:73.95:0,74,618	0/0:20,0:20:47.96:0,48,410	0/0:35,0:35:86.95:0,87,752	0/0:18,0:18:38.96:0,39,332	0/0:14,0:15:35.02:0,35,292	1/1:2,14:17:9.81:320,10,0	1/1:2,9:11:23.91:263,24,0	1/1:3,28:32:72.19:789,72,0	0/0:20,0:20:44.98:0,45,391	0/0:21,0:21:56.95:0,57,486	0/0:21,0:20:50.97:0,51,442	0/0:16,0:16:47.99:0,48,417
chr10	46432018	.	G	GTC	5927.01	PASS	AB=0.548;AC=13;AF=0.232;AN=56;BaseQRankSum=-6.439;DP=815;FS=7.849;HRun=0;HaplotypeScore=123.3961;InbreedingCoeff=0.9274;MQ=63.68;MQ0=5;MQRankSum=0.851;QD=28.36;ReadPosRankSum=3.741;VQSLOD=6.4507;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,40:51:82.21:1495,82,0	0/0:12,0:13:35.73:0,36,407	0/0:39,0:32:47.29:0,47,635	0/0:46,0:27:16:0,16,499	0/0:34,0:35:90.08:0,90,1051	0/0:19,0:19:42.11:0,42,499	0/0:31,0:31:71.80:0,72,840	0/0:24,0:24:39.09:0,39,451	1/1:6,22:28:48.16:778,48,0	0/0:28,0:28:53.22:0,53,757	0/0:13,0:13:29.92:0,30,344	1/1:5,18:23:42.14:667,42,0	1/1:9,23:32:20.38:823,20,0	0/0:46,0:46:99:0,111,1329	0/0:29,0:29:63.20:0,63,769	0/0:38,0:39:99:0,102,1206	0/0:37,0:37:87.21:0,87,1032	0/0:28,0:28:69.20:0,69,824	0/0:23,0:23:44.96:0,45,517	0/0:20,0:21:47.97:0,48,552	0/0:42,0:43:99:0,105,1232	0/1:3,14:17:3.51:454,0,4	1/1:6,16:23:32.90:531,33,0	1/1:5,29:34:41.61:1180,42,0	0/0:23,0:23:51.16:0,51,623	0/0:28,0:28:63.17:0,63,738	0/0:28,2:30:26.55:0,27,830	0/0:8,0:8:21.07:0,21,256
chr10	46432886	.	G	GTAGT	12738.82	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-14.832;DP=782;FS=10.694;HRun=0;HaplotypeScore=122.0788;InbreedingCoeff=0.9999;MQ=80.32;MQ0=1;MQRankSum=-4.030;QD=53.08;ReadPosRankSum=5.198;VQSLOD=5.9590;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,39:44:96.33:2511,96,0	0/0:11,0:11:33.11:0,33,607	0/0:24,0:24:54.18:0,54,982	0/0:20,0:20:48:0,48,743	0/0:24,0:24:63.16:0,63,1065	0/0:20,0:20:54.17:0,54,953	0/0:25,0:25:63.22:0,63,1159	0/0:26,0:26:69.22:0,69,1215	1/1:3,29:32:78.27:2056,78,0	0/0:25,0:25:63.18:0,63,1069	0/0:17,0:17:39.10:0,39,656	1/1:8,32:42:84.29:2210,84,0	1/1:5,22:29:60.21:1576,60,0	0/0:30,0:30:84.29:0,84,1545	0/0:35,0:35:99:0,99,1816	0/0:43,0:43:99:0,123,2161	0/0:25,0:25:75.26:0,75,1368	0/0:26,0:26:69.19:0,69,1225	0/0:17,0:17:45.14:0,45,775	0/0:19,0:19:57.20:0,57,1049	0/0:56,0:56:99:0,153,2703	1/1:5,18:23:42.14:1109,42,0	1/1:9,20:30:50.76:1219,51,0	1/1:3,32:37:78.27:2059,78,0	0/0:22,0:22:60.18:0,60,1038	0/0:33,0:33:78.26:0,78,1407	0/0:31,0:30:90.27:0,90,1619	0/0:13,0:13:39.13:0,39,717
chr10	46434271	.	A	AAAAC	743.44	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-2.120;DP=651;FS=0.000;HRun=0;HaplotypeScore=105.3369;InbreedingCoeff=0.8053;MQ=57.42;MQ0=10;MQRankSum=1.710;QD=22.53;ReadPosRankSum=-0.419;VQSLOD=3.2523;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:84.09:0,84,1241	1/1:3,5:8:12.04:286,12,0	0/0:20,0:5:3.01:0,3,46	0/0:22,0:8:2.52:0,3,47	0/0:22,0:22:42.10:0,42,636	0/0:24,0:24:48.11:0,48,710	0/0:25,0:25:45.08:0,45,639	0/0:43,0:41:59.65:0,60,811	0/0:9,0:9:12.04:0,12,190	0/0:30,0:30:54.18:0,54,839	0/0:23,0:23:48.16:0,48,740	0/0:22,0:22:48.15:0,48,736	0/0:17,0:17:24.07:0,24,342	0/0:21,0:21:42.11:0,42,619	1/1:8,15:25:24.08:573,24,0	0/0:14,0:14:33.10:0,33,503	0/0:34,0:34:57.18:0,57,874	0/0:17,0:17:27.09:0,27,427	0/0:15,0:16:17.90:0,18,222	0/0:24,0:24:48.16:0,48,755	0/0:25,0:25:60.18:0,60,896	0/0:13,0:13:26.88:0,27,393	0/0:20,0:19:39.09:0,39,572	0/0:31,0:32:66.20:0,66,1002	0/0:18,0:18:33.11:0,33,504	0/0:38,0:37:60.20:0,60,930	0/0:26,0:26:27.09:0,27,427	0/0:19,0:19:41.95:0,42,588
chr10	46434423	.	C	CTT	3657.52	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=1.361;DP=542;FS=2.306;HRun=12;HaplotypeScore=82.7230;InbreedingCoeff=0.9373;MQ=66.23;MQ0=3;MQRankSum=1.546;QD=15.18;ReadPosRankSum=0.390;VQSLOD=2.7842;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:12,24:38:62.64:819,63,0	1/1:4,0:6:7.36:25,7,0	0/0:9,0:9:8.65:0,9,67	0/0:10,0:8:6.97:0,7,60	0/0:27,0:27:62.94:0,63,583	0/0:17,0:18:42.45:0,42,390	0/0:16,0:16:32.97:0,33,300	0/0:32,0:31:56.76:0,57,513	1/1:5,10:15:24.08:337,24,0	0/0:26,0:26:65.70:0,66,582	0/0:15,0:15:23.77:0,24,216	1/1:0,15:15:30.06:398,30,0	1/1:4,15:20:30.10:421,30,0	0/0:13,0:13:17.74:0,18,166	1/1:5,0:24:7.68:85,8,0	0/0:21,0:21:41.92:0,42,383	0/0:24,0:24:60.02:0,60,554	0/0:26,0:28:60.44:0,60,595	1/1:6,0:18:34.05:139,34,0	1/1:8,0:18:23.27:100,23,0	1/1:4,0:13:22.46:78,22,0	1/1:0,4:4:9.03:122,9,0	1/1:4,13:20:31.34:365,31,0	1/1:4,19:23:45.15:631,45,0	0/0:21,0:21:50.93:0,51,460	0/0:19,0:20:38.37:0,38,329	1/1:5,0:26:39.71:139,40,0	0/0:18,0:19:8.07:0,8,249
chr10	46434755	.	G	GT	6272.37	PASS	AB=0.941;AC=24;AF=0.429;AN=56;BaseQRankSum=-6.838;DP=723;FS=19.401;HRun=10;HaplotypeScore=86.5322;InbreedingCoeff=0.8671;MQ=71.93;MQ0=5;MQRankSum=3.127;QD=18.13;ReadPosRankSum=1.056;VQSLOD=3.8873;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,33:38:57.75:790,58,0	0/0:17,0:17:38.92:0,39,320	0/0:47,0:36:5.57:0,6,301	0/1:38,0:22:1.47:1,0,111	0/0:33,2:35:57.81:0,58,672	0/0:15,0:15:37.97:0,38,298	0/0:20,0:21:52.96:0,53,425	0/0:31,2:33:20.46:0,20,493	1/1:3,18:21:38.79:416,39,0	0/0:34,0:34:86.88:0,87,714	0/1:13,2:15:25.02:25,0,231	1/1:4,16:22:56.81:569,57,0	1/1:4,27:31:69.04:718,69,0	0/0:27,0:27:71.78:0,72,577	0/0:23,0:23:59.92:0,60,492	0/0:25,0:25:62.89:0,63,514	0/0:24,0:25:58.96:0,59,472	0/0:22,0:22:59.91:0,60,492	1/1:9,19:26:19.88:491,20,0	1/1:3,13:16:35.76:363,36,0	1/1:4,29:35:71.86:724,72,0	1/1:4,21:26:41.22:474,41,0	1/1:2,20:22:51.02:531,51,0	1/1:3,22:25:35.37:566,35,0	0/0:16,0:16:46.49:0,46,372	0/0:23,0:23:34.03:0,34,478	1/1:2,23:27:59.82:604,60,0	0/0:14,0:14:38.56:0,39,305
chr10	46437399	.	A	AGTTTAAGGTGG	38246.68	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-3.831;DP=727;FS=0.000;HRun=0;HaplotypeScore=214.7409;InbreedingCoeff=0.9987;MQ=73.41;MQ0=0;MQRankSum=-21.042;QD=133.73;ReadPosRankSum=-2.192;VQSLOD=4.4665;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,154,5359	0/0:13,0:13:39.13:0,39,1321	0/0:20,0:20:51.18:0,51,1633	0/0:22,0:22:63.17:0,63,1809	1/1:14,14:29:78.22:3544,78,0	0/0:11,0:11:27.09:0,27,951	0/0:27,0:27:75.24:0,75,2503	1/1:20,8:31:78.23:3616,78,0	0/0:28,0:28:84.29:0,84,2997	1/1:13,6:19:57.20:2590,57,0	1/1:7,11:18:51.18:2706,51,0	0/0:33,0:33:93.32:0,93,3237	0/0:28,0:28:78.27:0,78,2617	1/1:17,11:31:81.24:4358,81,0	0/0:33,0:33:93.31:0,93,3050	1/1:12,29:45:99:6665,123,0	1/1:10,12:26:66.18:3340,66,0	1/1:9,14:25:60.21:3305,60,0	0/0:19,0:18:57.20:0,57,1905	0/0:16,0:16:48.16:0,48,1712	0/0:54,0:54:99:0,157,5443	0/0:16,0:16:48.16:0,48,1659	0/0:13,0:13:39.13:0,39,1371	0/0:37,0:37:99:0,108,3591	1/1:8,17:27:69.24:3634,69,0	1/1:10,14:25:72.23:3690,72,0	0/0:17,0:17:51.18:0,51,1745	1/1:5,1:10:18.06:798,18,0
chr10	46441326	.	CGTGTGTGTGT	C	3139.36	PASS	AB=0.776;AC=26;AF=0.520;AN=50;BaseQRankSum=5.935;DP=602;FS=13.211;HRun=0;HaplotypeScore=187.0478;InbreedingCoeff=0.6862;MQ=61.31;MQ0=8;MQRankSum=-6.286;QD=10.09;ReadPosRankSum=2.022;VQSLOD=1.7024;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:29:27.07:0,27,561	0/0:10,0:9:6.02:0,6,104	./.	./.	1/1:11,4:16:11.95:161,12,0	0/0:12,0:18:15.05:0,15,559	0/0:17,0:28:15.94:0,16,588	1/1:28,4:31:8.78:80,9,0	0/0:17,0:17:12.04:0,12,260	1/1:20,4:24:7.30:163,7,0	1/1:13,4:17:3.01:89,3,0	0/0:13,0:17:21.07:0,21,576	0/0:17,0:18:24.05:0,24,512	0/1:13,0:16:32.86:127,0,33	0/0:25,0:24:12.48:0,12,424	1/1:13,6:18:15.04:443,15,0	1/1:20,6:26:9.03:214,9,0	0/1:13,9:21:99:335,0,100	1/1:10,0:18:8.87:209,9,0	1/1:17,0:34:23.99:558,24,0	./.	0/0:16,0:20:18.06:0,18,389	0/0:12,0:15:21:0,21,457	0/0:16,0:18:21.07:0,21,473	1/1:16,9:27:14.40:252,14,0	1/1:20,3:22:2.81:88,3,0	1/1:8,0:27:23.70:549,24,0	1/1:7,0:8:6.01:63,6,0
chr10	46441350	.	T	TTCC	269.66	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=4.194;DP=548;FS=1.132;HRun=0;HaplotypeScore=133.9328;InbreedingCoeff=0.2057;MQ=50.28;MQ0=18;MQRankSum=-4.730;QD=3.55;ReadPosRankSum=-2.016;VQSLOD=1.7583;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:57.16:0,57,937	0/0:9,0:8:12.04:0,12,238	0/0:14,0:6:12.04:0,12,211	0/0:21,0:7:18.04:0,18,282	0/0:17,0:17:36.12:0,36,618	0/0:14,0:13:18.93:0,19,290	0/0:40,0:40:81.20:0,81,1371	0/0:28,0:27:78.15:0,78,1360	0/0:11,0:11:30.10:0,30,554	0/0:29,0:28:72.24:0,72,1301	0/0:18,0:18:36.07:0,36,624	0/0:19,0:19:46.54:0,47,719	0/0:11,0:11:33.11:0,33,574	0/0:15,0:14:30.07:0,30,442	0/0:22,0:21:45.15:0,45,813	0/0:18,0:17:42.10:0,42,613	0/0:26,0:26:43.91:0,44,651	0/0:22,0:21:48.09:0,48,714	0/1:16,0:13:99:163,0,99	0/1:22,0:22:99:101,0,182	1/1:6,7:12:2.91:55,3,0	0/0:18,0:18:34.52:0,35,563	0/0:14,0:14:28.74:0,29,505	0/0:26,0:26:54.13:0,54,840	0/0:24,0:24:48.14:0,48,801	0/0:21,0:20:57.19:0,57,1025	0/1:24,0:22:63.27:63,0,118	0/0:6,0:6:18.05:0,18,304
chr10	46442758	.	GTTTTGTTTTGTTTTGTTTTGT	G	12522.96	PASS	AB=1.000;AC=38;AF=0.679;AN=56;BaseQRankSum=4.458;DP=759;FS=3.334;HRun=0;HaplotypeScore=269.8720;InbreedingCoeff=0.0041;MQ=55.67;MQ0=13;MQRankSum=-0.175;QD=18.95;ReadPosRankSum=5.585;VQSLOD=3.3969;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:33:46.51:189,0,47	1/1:14,0:14:15.05:221,15,0	0/1:27,0:10:12.53:13,0,333	0/0:44,0:15:24.19:0,24,338	1/1:6,34:40:58.83:1012,59,0	0/0:24,0:23:18.94:0,19,321	0/0:30,0:30:15.03:0,15,294	1/1:18,0:18:33.52:487,34,0	0/1:31,0:31:40.41:328,0,40	1/1:2,21:23:63.18:1384,63,0	1/1:3,18:21:39.07:573,39,0	1/1:33,0:33:23.50:414,24,0	0/1:40,0:40:12.82:252,0,13	1/1:5,23:27:9.03:515,9,0	0/1:28,0:28:61.69:284,0,62	1/1:6,33:39:26.75:1544,27,0	1/1:5,22:27:12.04:409,12,0	1/1:7,21:27:0.63:168,1,0	0/1:23,0:21:99:225,0,131	0/1:25,0:25:99:284,0,127	0/1:18,0:18:27.84:32,0,28	0/1:18,0:18:3.01:150,0,3	0/1:27,0:27:99:182,0,111	0/1:28,0:28:43.38:141,0,43	1/1:2,18:20:15.05:858,15,0	1/1:4,21:25:63.19:2082,63,0	0/1:31,0:31:4.77:434,0,5	1/1:3,13:16:6.02:343,6,0
chr10	46442763	.	GTTTTGTTTTGTTTTGT	G	15750.64	PASS	AB=1.000;AC=51;AF=0.911;AN=56;BaseQRankSum=3.265;DP=725;FS=0.808;HRun=0;HaplotypeScore=205.0856;InbreedingCoeff=0.3055;MQ=55.40;MQ0=14;MQRankSum=0.223;QD=23.13;ReadPosRankSum=6.430;VQSLOD=3.3676;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:3,30:33:21.07:769,21,0	1/1:1,13:14:15.05:475,15,0	0/1:22,0:9:13.65:14,0,192	0/0:44,0:18:22.02:0,22,303	1/1:37,0:37:52.63:648,53,0	0/1:24,0:23:22.15:22,0,45	0/1:29,0:29:5.65:6,0,98	1/1:10,0:14:25.88:268,26,0	1/1:3,28:31:21.07:947,21,0	1/1:22,0:22:51.61:832,52,0	1/1:18,0:18:39.06:410,39,0	1/1:0,31:31:23.79:1092,24,0	1/1:4,36:40:18.04:776,18,0	1/1:25,0:24:9.03:350,9,0	1/1:6,23:29:21.07:854,21,0	1/1:35,0:35:26.75:1049,27,0	1/1:24,0:24:9.03:267,9,0	1/1:26,0:25:4.82:121,5,0	1/1:6,16:20:40.37:877,40,0	1/1:4,22:25:42.13:808,42,0	1/1:3,14:17:3.01:123,3,0	1/1:1,17:18:21.06:391,21,0	1/1:4,22:26:18.47:693,18,0	1/1:3,26:29:9.03:410,9,0	1/1:20,0:20:15.05:583,15,0	1/1:23,0:23:63.16:1451,63,0	1/1:4,28:32:30.10:1283,30,0	1/1:14,0:14:6.02:233,6,0
chr10	46442768	.	GTTTTGTTTTGT	G	10960.19	PASS	AB=0.944;AC=53;AF=0.946;AN=56;BaseQRankSum=3.769;DP=679;FS=9.328;HRun=0;HaplotypeScore=174.1399;InbreedingCoeff=0.3577;MQ=55.63;MQ0=12;MQRankSum=0.472;QD=17.18;ReadPosRankSum=5.366;VQSLOD=2.7771;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:32,0:32:23.95:443,24,0	1/1:13,0:13:15.05:312,15,0	0/1:16,0:8:17.59:18,0,138	0/0:39,0:16:10.87:0,11,294	1/1:36,0:36:49.97:520,50,0	1/1:4,20:23:5.67:257,6,0	1/1:2,26:28:6.02:142,6,0	1/1:12,0:14:29.64:284,30,0	1/1:30,0:30:21.07:566,21,0	1/1:22,0:22:50.59:653,51,0	1/1:18,0:18:38.59:346,39,0	1/1:31,0:31:24.05:658,24,0	1/1:37,0:37:17.99:456,18,0	1/1:24,0:23:9.03:245,9,0	1/1:26,0:26:21.07:527,21,0	1/1:33,0:33:27.06:735,27,0	1/1:22,0:22:9.03:197,9,0	1/1:24,0:23:4.82:86,5,0	1/1:19,0:18:36.93:527,37,0	1/1:23,0:22:41.65:576,42,0	1/1:16,0:16:3.01:69,3,0	1/1:17,0:17:21.06:283,21,0	1/1:23,0:23:21.12:398,21,0	1/1:27,0:27:9.03:247,9,0	1/1:18,0:18:15.05:408,15,0	1/1:21,0:21:62.46:1079,62,0	1/1:29,0:29:30.09:764,30,0	1/1:13,0:13:6.02:163,6,0
chr10	46442778	.	GT	G	3909.47	PASS	AB=0.992;AC=47;AF=0.839;AN=56;BaseQRankSum=4.087;DP=651;FS=10.569;HRun=5;HaplotypeScore=142.4191;InbreedingCoeff=0.0687;MQ=59.06;MQ0=9;MQRankSum=-0.822;QD=6.28;ReadPosRankSum=4.366;VQSLOD=-0.1606;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:31,0:31:12.72:112,0,13	1/1:13,0:13:14.25:103,14,0	0/1:17,1:10:16.73:17,0,188	0/0:26,2:18:12.18:0,12,290	1/1:35,0:35:35.33:377,35,0	0/1:21,0:21:19.76:32,0,20	0/1:26,0:26:7.33:7,0,10	1/1:1,14:15:23.75:454,24,0	1/1:28,0:28:19.48:108,19,0	1/1:22,0:22:28.63:363,29,0	1/1:18,0:18:26.78:284,27,0	1/1:31,0:31:21.87:100,22,0	1/1:36,0:36:16.65:117,17,0	1/1:24,0:23:8.23:35,8,0	1/1:23,1:24:19.48:108,19,0	1/1:33,0:33:24.70:106,25,0	1/1:22,0:22:8.50:58,8,0	0/1:24,0:23:4.66:9,0,5	0/1:19,0:18:24.76:233,0,25	1/1:23,0:22:34.05:339,34,0	1/1:14,0:14:3.01:34,3,0	1/1:17,0:17:2.87:164,3,0	0/1:22,0:22:7.30:117,0,7	1/1:26,0:26:8.23:37,8,0	1/1:18,0:18:13.85:62,14,0	1/1:21,0:21:51.33:402,51,0	1/1:29,0:29:21.07:106,21,0	1/1:13,0:13:5.49:24,5,0
chr10	46445417	.	GCACACACA	G	4074.84	PASS	AB=0.805;AC=21;AF=0.375;AN=56;BaseQRankSum=0.852;DP=669;FS=16.974;HRun=0;HaplotypeScore=180.5933;InbreedingCoeff=0.7772;MQ=50.75;MQ0=19;MQRankSum=-5.561;QD=16.30;ReadPosRankSum=2.419;VQSLOD=1.9755;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:21.05:0,21,673	0/0:10,0:11:24.06:0,24,693	0/0:25,0:7:3.01:0,3,37	0/0:33,0:9:6.02:0,6,125	1/1:7,7:15:8.78:152,9,0	0/0:11,0:16:27.09:0,27,950	0/0:24,0:37:42.14:0,42,1426	1/1:20,5:23:14.05:192,14,0	0/0:17,0:23:12.91:0,13,250	1/1:13,12:25:35.53:781,36,0	1/1:9,2:11:2.97:20,3,0	0/0:13,0:22:21.03:0,21,314	0/0:19,0:28:32.94:0,33,729	1/1:16,8:27:14.72:339,15,0	0/0:16,0:25:39.13:0,39,1349	1/1:12,21:35:27.56:684,28,0	1/1:18,12:33:24.08:567,24,0	0/1:25,8:33:75.91:281,0,76	0/0:15,0:14:8.99:0,9,249	0/0:10,0:19:33.11:0,33,1128	0/0:28,0:41:60.14:0,60,1544	0/0:13,0:13:6.02:0,6,212	0/0:14,0:14:9.01:0,9,185	0/0:25,0:40:15.72:0,16,346	1/1:7,12:20:17.86:394,18,0	1/1:9,10:19:30.08:589,30,0	0/0:13,0:23:27.09:0,27,848	1/1:3,4:7:3.01:76,3,0
chr10	46446394	.	CT	C	11750.01	PASS	AC=50;AF=0.926;AN=54;BaseQRankSum=-4.358;DP=680;FS=15.027;HRun=11;HaplotypeScore=88.9534;InbreedingCoeff=0.9481;MQ=76.12;MQ0=0;MQRankSum=-2.920;QD=18.36;ReadPosRankSum=5.193;VQSLOD=4.3191;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,20:24:61.96:499,62,0	1/1:0,8:8:20.97:172,21,0	0/0:23,1:23:13.22:0,13,271	0/0:16,0:11:15.95:0,16,140	1/1:5,29:36:73.93:620,74,0	1/1:2,26:28:77.91:640,78,0	1/1:3,17:20:50.92:418,51,0	1/1:14,19:34:29.84:429,30,0	1/1:2,22:24:56.93:468,57,0	1/1:6,24:31:67.88:541,68,0	1/1:3,12:18:30.60:233,31,0	1/1:3,26:31:41:522,41,0	1/1:1,13:17:10.09:257,10,0	1/1:4,15:20:46:357,46,0	1/1:6,19:25:53.92:443,54,0	1/1:5,14:19:38.94:320,39,0	1/1:3,34:37:92.88:764,93,0	1/1:6,23:30:64.94:523,65,0	1/1:5,24:29:52.75:545,53,0	1/1:1,22:24:67.92:542,68,0	1/1:4,24:28:65.92:542,66,0	1/1:7,28:36:73.90:597,74,0	1/1:0,16:17:40.98:326,41,0	1/1:2,21:23:56.91:468,57,0	1/1:4,18:23:40.96:326,41,0	1/1:5,35:40:99:862,105,0	1/1:2,16:18:15.96:337,16,0	./.
chr10	46446890	.	G	GT	11393.45	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-17.190;DP=759;FS=4.617;HRun=1;HaplotypeScore=68.6643;InbreedingCoeff=0.9999;MQ=89.67;MQ0=0;MQRankSum=-6.907;QD=44.33;ReadPosRankSum=4.313;VQSLOD=4.6467;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,114,1591	0/0:13,0:13:39.13:0,39,541	0/0:30,0:30:87.14:0,87,1137	0/0:28,0:28:78.23:0,78,1044	1/1:1,14:15:42.14:671,42,0	0/0:29,0:29:84.28:0,84,1173	0/0:40,0:40:99:0,120,1637	1/1:0,30:30:87.30:1379,87,0	0/0:22,0:22:66.22:0,66,923	1/1:0,18:18:54.18:864,54,0	1/1:0,12:12:36.12:575,36,0	0/0:45,0:45:99:0,135,1883	0/0:34,0:34:99:0,102,1421	1/1:0,28:29:72.25:1142,72,0	0/0:36,0:36:99:0,105,1454	1/1:0,34:34:99:1583,99,0	1/1:0,30:29:87.30:1391,87,0	1/1:0,26:26:66.23:1055,66,0	0/0:24,0:24:72.20:0,72,969	0/0:12,0:12:33.11:0,33,462	0/0:60,0:60:99:0,175,2395	0/0:14,0:14:42.14:0,42,586	0/0:11,0:11:33.11:0,33,461	0/0:32,0:32:96.32:0,96,1343	1/1:0,22:22:57.19:910,57,0	1/1:0,23:23:66.20:1020,66,0	0/0:32,0:32:96.31:0,96,1319	1/1:0,17:18:51.17:804,51,0
chr10	46454287	.	GAAA	G	6342.88	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-12.435;DP=586;FS=0.759;HRun=8;HaplotypeScore=128.0260;InbreedingCoeff=0.9805;MQ=67.79;MQ0=3;MQRankSum=-3.057;QD=27.70;ReadPosRankSum=4.640;VQSLOD=2.4105;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,30:33:72.23:1051,72,0	1/1:4,11:15:24.08:352,24,0	0/0:26,0:7:12.04:0,12,145	0/0:22,0:12:25.59:0,26,313	0/0:24,0:24:63.19:0,63,1172	0/0:17,0:17:48.13:0,48,948	0/0:21,0:21:57.17:0,57,1117	0/0:37,0:37:96.29:0,96,1933	1/1:1,12:13:27.09:397,27,0	0/0:23,0:23:60.19:0,60,1173	0/0:9,0:9:27.09:0,27,575	1/1:3,20:23:35.68:520,36,0	1/1:1,13:14:27.02:397,27,0	0/0:17,0:17:51.17:0,51,1043	1/1:2,14:16:32.61:485,33,0	0/0:15,0:15:42.14:0,42,852	0/0:39,0:39:99:0,117,2356	0/0:42,0:42:99:0,117,2282	1/1:3,14:17:42.05:520,42,0	1/1:3,10:13:27.02:367,27,0	1/1:0,18:18:39.13:566,39,0	1/1:0,9:9:17.97:237,18,0	1/1:2,9:11:6.55:129,7,0	1/1:2,19:21:33.11:485,33,0	0/0:23,0:23:63.20:0,63,1253	0/0:28,0:28:81.22:0,81,1611	1/1:0,26:26:57.19:837,57,0	0/0:13,0:13:39.11:0,39,718
chr10	46455866	.	AC	A	13021.35	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-7.337;DP=652;FS=6.565;HRun=2;HaplotypeScore=76.9198;InbreedingCoeff=0.9661;MQ=73.16;MQ0=0;MQRankSum=-1.070;QD=34.91;ReadPosRankSum=0.156;VQSLOD=4.9207;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,43:43:99:1480,114,0	0/0:7,0:7:18.06:0,18,268	0/0:13,0:13:22.79:0,23,429	0/0:7,0:7:15.04:0,15,198	0/0:5,0:5:15.05:0,15,225	1/1:0,16:16:42.14:545,42,0	1/1:1,53:54:99:1831,141,0	0/0:32,0:32:93.29:0,93,1340	1/1:0,26:26:75.24:974,75,0	0/0:17,0:17:51.17:0,51,747	0/0:4,0:4:9.03:0,9,135	1/1:2,46:48:99:1705,132,0	1/1:2,38:40:99:1426,111,0	0/0:37,0:37:99:0,108,1597	0/0:28,0:28:81.26:0,81,1194	0/0:39,0:39:99:0,117,1716	0/0:27,0:27:81.24:0,81,1171	0/0:32,0:32:96.33:0,96,1439	1/1:1,14:15:45.15:581,45,0	1/1:1,6:7:15.05:195,15,0	1/1:2,62:64:99:2259,175,0	1/1:1,6:7:15.05:195,15,0	1/1:0,2:2:6.02:78,6,0	1/1:0,35:35:96.31:1247,96,0	0/0:9,0:9:24.08:0,24,359	0/0:16,0:16:48.15:0,48,699	1/1:0,16:16:39.13:505,39,0	0/0:6,0:6:18.06:0,18,270
chr10	46457929	.	C	CA	5226.68	PASS	AB=0.727;AC=31;AF=0.554;AN=56;BaseQRankSum=-5.892;DP=532;FS=11.175;HRun=9;HaplotypeScore=94.2637;InbreedingCoeff=0.8853;MQ=48.41;MQ0=24;MQRankSum=-5.726;QD=17.08;ReadPosRankSum=-2.685;VQSLOD=3.3700;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,1:37:99:0,101,853	0/0:14,0:13:32.99:0,33,286	1/1:7,0:4:2.97:20,3,0	0/0:3,0:2:3.93:0,4,12	1/1:9,10:18:27.07:298,27,0	0/0:18,0:18:38.97:0,39,334	0/0:18,0:15:26.97:0,27,230	1/1:13,10:24:38.29:389,38,0	0/0:10,0:10:26.98:0,27,234	1/1:11,10:18:36.06:384,36,0	1/1:6,10:16:39.05:405,39,0	0/0:22,0:22:40.97:0,41,336	0/0:19,0:18:23.90:0,24,208	1/1:10,6:15:35.89:348,36,0	0/0:24,0:23:53.93:0,54,464	1/1:10,13:22:19.04:421,19,0	1/1:23,5:25:24.88:459,25,0	1/1:11,6:16:35.72:417,36,0	0/1:10,5:12:6.33:132,0,6	1/1:6,8:13:21.02:219,21,0	1/1:10,3:11:9.01:92,9,0	0/0:16,0:14:26.98:0,27,231	0/0:16,0:15:32:0,32,258	0/0:23,0:20:47.96:0,48,412	1/1:8,7:13:17.70:165,18,0	1/1:14,14:27:53.51:571,54,0	1/1:16,13:29:56.86:576,57,0	1/1:10,8:17:30.08:331,30,0
chr10	46457943	.	CAA	C	3903.64	PASS	AB=0.749;AC=26;AF=0.464;AN=56;BaseQRankSum=-3.780;DP=536;FS=1.258;HRun=13;HaplotypeScore=103.7654;InbreedingCoeff=0.6588;MQ=53.86;MQ0=18;MQRankSum=0.152;QD=12.93;ReadPosRankSum=3.057;VQSLOD=2.8099;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,35:43:77.44:821,77,0	0/0:13,0:12:27.09:0,27,391	0/0:14,0:7:17.70:0,18,142	0/1:6,0:5:1.99:2,0,114	0/0:12,0:22:42.57:0,43,189	0/0:4,1:19:7.85:0,8,163	0/0:4,0:14:13.85:0,14,100	0/0:8,0:31:58.74:0,59,268	1/1:2,9:11:27.02:262,27,0	0/1:13,2:21:32.12:32,0,94	0/1:11,2:20:1.54:2,0,67	1/1:7,9:15:24.02:233,24,0	0/1:5,11:16:5.86:186,0,6	0/0:13,0:18:32.91:0,33,139	0/0:19,0:21:53.15:0,53,694	0/1:12,1:19:7.62:8,0,91	0/0:16,0:20:35.22:0,35,125	0/1:14,1:18:1.14:1,0,58	1/1:4,20:22:41.59:431,42,0	1/1:5,9:14:14.94:195,15,0	1/1:2,7:9:23.71:214,24,0	1/1:6,6:11:18.02:175,18,0	1/1:0,13:12:33.05:320,33,0	1/1:3,20:20:48.04:466,48,0	0/0:9,0:15:15.89:0,16,72	0/0:11,1:23:19.63:0,20,148	1/1:4,21:26:53.72:556,54,0	0/0:8,0:12:17.34:0,17,60
chr10	46458129	.	C	CT	7022.63	PASS	AB=0.880;AC=24;AF=0.429;AN=56;BaseQRankSum=9.372;DP=641;FS=9.148;HRun=7;HaplotypeScore=80.4407;InbreedingCoeff=0.7359;MQ=70.22;MQ0=0;MQRankSum=0.685;QD=21.67;ReadPosRankSum=3.154;VQSLOD=4.3726;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,46:48:99:1558,129,0	0/0:4,0:4:6.01:0,6,58	0/1:7,0:7:2.49:2,0,32	0/0:11,0:12:6.55:0,7,44	0/0:28,0:28:78.04:0,78,726	1/1:0,26:25:69.21:833,69,0	1/1:3,18:21:42.13:507,42,0	0/0:35,0:35:81.03:0,81,752	0/1:1,13:14:1.78:263,0,2	0/0:26,0:26:60.03:0,60,568	0/0:11,0:11:26.86:0,27,240	1/1:2,19:21:54.16:648,54,0	1/1:1,24:25:66.15:780,66,0	0/0:21,0:21:63.04:0,63,592	0/0:26,0:26:69.08:0,69,657	0/0:27,1:28:44.84:0,45,703	0/0:22,0:22:60.04:0,60,560	0/0:23,0:23:66.08:0,66,629	0/1:26,0:26:71.49:71,0,98	1/1:16,0:16:22.85:148,23,0	0/1:30,0:30:48.84:126,0,49	1/1:1,18:19:38.78:445,39,0	1/1:2,10:12:24.07:290,24,0	1/1:0,35:35:99:1177,99,0	0/0:23,0:23:62.98:0,63,575	0/0:38,0:38:99:0,105,973	1/1:24,0:24:25.88:175,26,0	0/0:20,0:20:60.06:0,60,569
chr10	46458136	.	T	TA	4164.42	PASS	AB=1.000;AC=24;AF=0.429;AN=56;BaseQRankSum=8.918;DP=643;FS=5.274;HRun=7;HaplotypeScore=91.0637;InbreedingCoeff=0.7632;MQ=66.84;MQ0=0;MQRankSum=-0.650;QD=12.85;ReadPosRankSum=3.187;VQSLOD=3.0159;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:49,0:49:62.26:440,62,0	0/0:2,0:2:6.01:0,6,58	0/0:5,0:7:8.66:0,9,40	0/0:7,0:7:1.11:0,1,3	0/0:31,0:31:72.02:0,72,669	1/1:27,0:26:60.67:255,61,0	0/1:19,0:19:5.66:105,0,6	0/0:29,0:29:69.09:0,69,658	1/1:14,0:14:3.44:84,3,0	0/0:26,0:26:65.45:0,65,610	0/0:12,0:13:31.16:0,31,249	1/1:23,0:23:4.07:155,4,0	1/1:24,0:24:55.15:235,55,0	0/0:22,0:22:60.09:0,60,574	0/0:27,0:27:78.07:0,78,729	0/0:29,0:29:67.45:0,67,706	0/0:22,0:22:54.07:0,54,516	0/0:24,0:24:66.07:0,66,629	1/1:6,19:26:31.96:590,32,0	1/1:1,17:18:48.11:558,48,0	1/1:7,24:31:57.17:682,57,0	0/1:20,0:20:4.96:92,0,5	1/1:11,0:11:0.54:68,1,0	1/1:37,0:37:44.06:292,44,0	0/0:22,0:22:54.06:0,54,511	0/0:38,0:38:89.46:0,89,835	1/1:3,22:25:51.16:610,51,0	0/0:20,0:20:57.09:0,57,549
chr10	46461026	.	CTA	C	4624.87	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=10.529;DP=481;FS=0.408;HRun=0;HaplotypeScore=62.0219;InbreedingCoeff=0.9584;MQ=75.77;MQ0=0;MQRankSum=-1.402;QD=38.54;ReadPosRankSum=3.142;VQSLOD=6.6254;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,21:21:57.19:872,57,0	0/0:5,0:5:12.04:0,12,228	0/0:12,0:12:28.88:0,29,461	0/0:8,0:8:24.08:0,24,447	0/0:6,0:6:15.05:0,15,290	0/0:20,0:19:57.18:0,57,1048	0/0:35,0:35:99:0,102,1956	0/0:19,0:19:54.19:0,54,1038	1/1:0,19:19:51.13:754,51,0	0/0:13,0:13:36.12:0,36,693	0/0:2,0:2:6.02:0,6,116	1/1:1,21:22:60.20:916,60,0	1/1:2,12:14:30.10:458,30,0	0/0:16,0:16:48.16:0,48,907	0/0:18,0:18:54.19:0,54,1042	0/0:16,0:16:48.12:0,48,827	0/0:21,0:21:63.19:0,63,1162	0/0:30,0:30:90.25:0,90,1606	0/0:12,0:12:30.08:0,30,515	0/0:7,0:7:15.04:0,15,248	0/0:64,0:64:99:0,193,3583	1/1:0,10:11:27.09:411,27,0	1/1:0,4:4:8.99:112,9,0	1/1:0,29:29:72.24:1101,72,0	0/0:17,0:17:51.15:0,51,919	0/0:12,0:12:36.12:0,36,686	0/0:12,0:12:36.12:0,36,695	0/0:16,0:16:45.15:0,45,841
chr10	46461597	.	C	CAT	118.35	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-1.823;DP=406;FS=4.597;HRun=0;HaplotypeScore=45.6248;InbreedingCoeff=0.6238;MQ=70.65;MQ0=2;MQRankSum=-0.749;QD=10.76;ReadPosRankSum=1.698;VQSLOD=2.8981;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:33.11:0,33,429	0/0:9,0:9:18.04:0,18,219	0/0:13,0:5:2.66:0,3,17	0/0:27,0:13:1.66:0,2,3	0/0:20,0:20:54.16:0,54,687	0/0:20,0:20:51.16:0,51,649	0/0:7,0:7:18.06:0,18,233	0/0:32,0:32:78.24:0,78,995	0/0:13,0:13:30.08:0,30,375	0/0:17,0:17:42.14:0,42,546	0/0:13,0:13:30.10:0,30,389	0/0:10,0:10:21.06:0,21,260	0/0:12,0:12:30.10:0,30,380	1/1:5,6:11:12.04:204,12,0	0/0:8,0:8:18.06:0,18,234	0/0:10,0:10:21.04:0,21,244	0/0:18,0:18:42.14:0,42,546	0/0:19,0:19:54.18:0,54,699	0/0:15,0:15:42.14:0,42,546	0/0:6,0:6:12.04:0,12,155	0/0:7,0:7:21.07:0,21,272	0/0:3,0:3:6.02:0,6,78	0/0:10,0:10:21.05:0,21,257	0/0:3,0:3:6.02:0,6,77	0/0:20,0:20:51.17:0,51,662	0/0:23,0:23:69.22:0,69,895	0/0:19,0:19:54.05:0,54,661	0/0:29,0:29:84.21:0,84,1039
chr10	46461723	.	T	TAA	6804.27	PASS	AB=0.688;AC=45;AF=0.804;AN=56;BaseQRankSum=-1.381;DP=513;FS=1.318;HRun=13;HaplotypeScore=70.3967;InbreedingCoeff=0.3754;MQ=72.00;MQ0=2;MQRankSum=-0.453;QD=14.36;ReadPosRankSum=0.621;VQSLOD=3.7627;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,25:32:47.59:577,48,0	0/0:4,0:5:14.68:0,15,109	0/1:20,0:12:10.53:11,0,101	0/0:10,0:9:7.90:0,8,55	1/1:4,9:15:32.30:287,32,0	1/1:6,1:23:4.53:101,5,0	0/1:7,0:16:24.85:25,0,34	1/1:9,23:37:77.70:761,78,0	1/1:2,8:11:11.53:131,12,0	1/1:7,11:23:44.48:465,44,0	1/1:2,18:23:55.89:579,56,0	0/1:2,11:13:11.39:148,0,11	1/1:6,9:15:12.04:163,12,0	1/1:1,7:9:18.05:231,18,0	0/0:22,0:23:41.67:0,42,410	1/1:0,9:11:20.52:233,21,0	1/1:5,14:22:8.47:301,8,0	1/1:4,14:24:43.60:503,44,0	0/1:15,0:27:74.89:118,0,75	1/1:4,1:24:38.92:193,39,0	1/1:3,0:10:14.29:48,14,0	1/1:0,9:9:20.96:242,21,0	1/1:4,8:13:20.56:253,21,0	1/1:3,7:13:23.55:269,24,0	0/1:3,3:13:4.30:92,0,4	1/1:7,13:25:47.15:517,47,0	1/1:7,2:32:2.06:188,2,0	1/1:0,13:13:27.09:366,27,0
chr10	46462121	.	C	CAG	30995.24	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-11.868;DP=702;FS=5.018;HRun=0;HaplotypeScore=73.7077;InbreedingCoeff=0.9938;MQ=86.51;MQ0=0;MQRankSum=-6.871;QD=50.07;ReadPosRankSum=3.157;VQSLOD=5.6329;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,36:37:90.31:1739,90,0	0/0:8,0:8:21.06:0,21,301	0/0:23,0:23:63.20:0,63,933	0/0:22,0:22:52.89:0,53,662	1/1:1,23:24:63.22:1217,63,0	1/1:1,24:25:63.22:1217,63,0	1/1:1,19:21:54.19:1043,54,0	1/1:6,35:41:99:2036,108,0	1/1:0,19:19:54.19:1043,54,0	1/1:1,26:27:78.27:1491,78,0	1/1:1,9:10:24.08:464,24,0	1/1:1,23:25:57.20:1101,57,0	1/1:0,25:26:72.21:1390,72,0	1/1:2,25:27:60.21:1159,60,0	0/0:30,0:30:90.31:0,90,1374	1/1:1,18:19:48.16:927,48,0	1/1:0,22:22:63.22:1217,63,0	1/1:1,37:38:99:2084,108,0	1/1:2,24:26:78.21:1381,78,0	1/1:0,22:22:60.21:1159,60,0	1/1:0,68:68:99:3651,190,0	1/1:2,17:19:45.15:864,45,0	1/1:1,18:19:48.16:927,48,0	1/1:1,29:31:81.28:1565,81,0	1/1:3,16:19:36.12:696,36,0	1/1:1,21:22:63.22:1208,63,0	1/1:2,21:24:60.19:1126,60,0	1/1:1,6:7:15.05:290,15,0
chr10	46465450	.	A	AGGTGGCTCAGC	43465.86	PASS	AB=1.000;AC=53;AF=0.946;AN=56;BaseQRankSum=-5.047;DP=550;FS=1.977;HRun=0;HaplotypeScore=140.8101;InbreedingCoeff=0.7013;MQ=51.53;MQ0=5;MQRankSum=-7.083;QD=81.70;ReadPosRankSum=4.208;VQSLOD=4.8186;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,6:23:18.06:1028,18,0	1/1:2,2:5:9.03:514,9,0	0/0:18,0:13:26.76:0,27,731	0/1:23,0:19:1.95:2,0,1188	1/1:2,7:11:18.04:854,18,0	1/1:5,8:21:30.10:1614,30,0	1/1:9,16:25:48.16:2640,48,0	1/1:10,6:19:48.10:1880,48,0	1/1:4,13:17:21.07:1198,21,0	1/1:13,7:20:47.99:2135,48,0	1/1:1,8:11:24.08:1289,24,0	1/1:7,10:22:41.73:2183,42,0	1/1:4,11:20:39.13:2116,39,0	1/1:9,15:25:45.07:2202,45,0	1/1:12,24:40:69.06:3461,69,0	1/1:11,21:35:66.23:3625,66,0	1/1:8,7:17:30.10:1712,30,0	1/1:9,8:18:30.16:1530,30,0	1/1:3,5:13:36.12:1419,36,0	1/1:6,6:16:27.09:1497,27,0	1/1:17,7:27:24.08:1269,24,0	1/1:5,9:17:33.11:1758,33,0	1/1:3,4:8:8.57:511,9,0	1/1:4,5:12:9.03:511,9,0	1/1:2,5:8:15.05:695,15,0	1/1:9,10:28:77.92:2938,78,0	1/1:9,8:22:39.13:2051,39,0	1/1:5,2:7:15.05:835,15,0
chr10	46465606	.	TA	T	4838.02	PASS	AB=1.000;AC=35;AF=0.625;AN=56;BaseQRankSum=-4.022;DP=516;FS=2.808;HRun=13;HaplotypeScore=64.4287;InbreedingCoeff=0.8682;MQ=58.36;MQ0=7;MQRankSum=4.622;QD=12.63;ReadPosRankSum=4.923;VQSLOD=5.0715;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:68.70:0,69,584	0/0:7,0:8:20.87:0,21,189	0/0:8,0:6:1.03:0,1,26	0/1:7,0:4:9.57:10,0,17	1/1:7,15:23:37.77:265,38,0	1/1:2,8:10:17.89:131,18,0	1/1:7,11:18:20.86:153,21,0	1/1:12,14:22:32.66:236,33,0	0/0:12,0:11:18.03:0,18,175	1/1:9,17:28:55.87:373,56,0	1/1:8,10:18:10.32:177,10,0	0/0:16,0:18:35.73:0,36,299	0/0:12,0:12:26.94:0,27,234	1/1:3,13:16:35.79:262,36,0	0/0:17,0:17:22.32:0,22,223	1/1:3,23:26:26.58:363,27,0	1/1:6,26:32:56.58:416,57,0	1/1:7,31:39:64.96:611,65,0	1/1:6,15:18:31.73:220,32,0	1/1:2,15:18:38.26:262,38,0	1/1:4,8:12:20.82:153,21,0	0/0:8,0:8:18.02:0,18,171	0/0:12,0:12:18.01:0,18,165	0/0:5,0:5:5.96:0,6,49	1/1:7,17:25:46.75:334,47,0	1/1:8,14:21:38.24:265,38,0	1/1:3,22:25:56.64:415,57,0	1/1:6,10:15:26.80:193,27,0
chr10	46467950	.	CG	C	6889.40	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=18.117;DP=788;FS=4.613;HRun=2;HaplotypeScore=92.0014;InbreedingCoeff=0.9999;MQ=75.09;MQ0=0;MQRankSum=-7.112;QD=36.26;ReadPosRankSum=2.734;VQSLOD=5.3930;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,42:42:99:1557,120,0	0/0:15,0:15:42.14:0,42,628	0/0:28,0:27:75.24:0,75,1067	0/0:27,0:27:72.20:0,72,1006	0/0:32,0:32:96.31:0,96,1414	0/0:19,0:19:57.19:0,57,854	0/0:39,0:39:99:0,117,1690	0/0:25,0:25:72.24:0,72,1078	1/1:0,20:20:54.18:701,54,0	0/0:46,0:46:99:0,135,1973	0/0:13,0:13:39.10:0,39,539	1/1:1,35:36:99:1283,99,0	1/1:1,23:24:69.22:895,69,0	0/0:38,0:38:99:0,114,1651	0/0:39,0:39:99:0,117,1691	0/0:35,0:35:99:0,105,1533	0/0:30,0:29:84.28:0,84,1258	0/0:22,0:22:63.21:0,63,939	0/0:18,0:18:51.63:0,52,728	0/0:23,0:23:63.21:0,63,940	0/0:60,0:60:99:0,175,2586	1/1:0,26:26:75.20:954,75,0	1/1:0,18:18:51.13:644,51,0	1/1:0,24:24:66.21:856,66,0	0/0:21,0:21:63.17:0,63,884	0/0:31,0:31:84.28:0,84,1239	0/0:27,0:27:81.27:0,81,1209	0/0:10,0:10:30.10:0,30,449
chr10	46470393	.	CAGGATAGCCCACAGCAGGGCCAT	C	8957.58	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=1.413;DP=684;FS=4.300;HRun=0;HaplotypeScore=372.2243;InbreedingCoeff=0.9578;MQ=56.66;MQ0=7;MQRankSum=0.766;QD=40.35;ReadPosRankSum=-3.854;VQSLOD=1.9543;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:73.49:0,73,2618	0/0:8,0:8:12.51:0,13,492	0/0:25,0:10:21.07:0,21,480	0/0:23,0:14:23.75:0,24,392	1/1:11,0:8:15.05:343,15,0	0/0:21,0:20:33.11:0,33,950	0/0:40,0:40:81.28:0,81,2669	1/1:17,14:31:42.13:674,42,0	0/0:30,0:30:57.20:0,57,2402	1/1:18,0:18:36.12:816,36,0	1/1:6,0:6:6.02:172,6,0	0/0:41,0:41:96.31:0,96,3715	0/0:36,0:36:87.28:0,87,3031	1/1:29,0:29:45.15:1325,45,0	0/0:37,0:37:87.30:0,87,3698	1/1:28,0:28:45.14:1468,45,0	1/1:30,0:30:48.16:1360,48,0	1/1:26,0:26:54.18:1495,54,0	0/0:21,0:19:33.11:0,33,833	0/0:4,0:4:9.03:0,9,218	0/0:62,0:61:99:0,105,3725	0/0:17,0:15:30.10:0,30,900	0/0:9,0:9:21.07:0,21,663	0/0:29,0:29:51.11:0,51,2136	1/1:19,0:19:24.08:701,24,0	1/1:18,0:18:15.05:389,15,0	0/0:24,0:24:48.16:0,48,2231	1/1:6,0:6:9.03:215,9,0
chr10	46470453	.	T	TTCACTCAC	14685.79	PASS	AC=48;AF=0.889;AN=54;BaseQRankSum=1.536;DP=702;FS=0.707;HRun=0;HaplotypeScore=219.0555;InbreedingCoeff=0.7949;MQ=57.99;MQ0=5;MQRankSum=-2.674;QD=23.84;ReadPosRankSum=-2.286;VQSLOD=3.9328;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:37:56.87:462,57,0	0/0:10,0:10:24.07:0,24,485	./.	0/0:21,0:14:2.97:0,3,20	1/1:11,3:15:6.02:221,6,0	1/1:11,0:23:23.55:181,24,0	1/1:17,0:31:17.97:150,18,0	1/1:29,0:29:30.10:742,30,0	1/1:13,11:26:30.10:1189,30,0	1/1:14,0:22:23.25:180,23,0	1/1:6,0:10:8.98:73,9,0	1/1:23,10:36:33.11:1294,33,0	1/1:28,7:37:30.57:1157,31,0	1/1:22,12:35:45.15:1707,45,0	0/0:37,0:37:69.21:0,69,1583	1/1:20,9:31:33.58:1317,34,0	1/1:24,5:30:18.06:641,18,0	1/1:25,0:25:9.03:314,9,0	1/1:12,0:16:15.01:189,15,0	1/1:6,0:14:20.88:174,21,0	1/1:27,0:67:83.82:704,84,0	1/1:9,3:14:15.05:533,15,0	1/1:7,3:12:18.06:644,18,0	1/1:25,8:34:18.06:679,18,0	1/1:21,5:26:21.07:833,21,0	1/1:13,7:20:24.08:958,24,0	1/1:9,0:19:12.44:99,12,0	1/1:4,2:6:6.02:244,6,0
chr10	46470828	.	G	GT	8080.60	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-11.094;DP=746;FS=0.639;HRun=1;HaplotypeScore=75.4754;InbreedingCoeff=0.9966;MQ=74.38;MQ0=0;MQRankSum=-0.906;QD=36.90;ReadPosRankSum=3.676;VQSLOD=5.3305;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,40:41:96.33:1438,96,0	0/0:5,0:5:15.01:0,15,175	0/0:15,0:14:29.95:0,30,389	0/0:27,0:27:73.40:0,73,879	0/0:33,0:33:90.10:0,90,1075	0/0:23,0:23:69.21:0,69,881	0/0:31,0:31:90.22:0,90,1128	0/0:32,0:32:93.29:0,93,1179	1/1:1,27:28:63.21:943,63,0	0/0:23,0:23:69.21:0,69,874	0/0:12,0:12:36.12:0,36,466	1/1:2,33:35:84.28:1259,84,0	1/1:2,35:37:93.21:1363,93,0	0/0:38,0:38:99:0,111,1385	0/0:25,0:25:66.18:0,66,828	0/0:38,0:38:99:0,111,1429	0/0:28,0:28:81.26:0,81,1049	0/0:21,0:21:63.15:0,63,783	0/0:29,0:29:87.26:0,87,1100	0/0:20,0:20:60.19:0,60,773	0/0:37,0:37:99:0,108,1386	1/1:0,26:26:75.17:1078,75,0	1/1:3,19:22:57.02:796,57,0	1/1:1,29:30:81.27:1204,81,0	0/0:26,0:26:75.22:0,75,945	0/0:26,0:26:78.24:0,78,997	0/0:30,0:30:90.28:0,90,1154	0/0:8,0:8:24.08:0,24,311
chr10	46471062	.	A	ATGTG	4939.42	PASS	AB=0.835;AC=39;AF=0.750;AN=52;BaseQRankSum=-1.795;DP=840;FS=0.000;HRun=0;HaplotypeScore=167.0971;InbreedingCoeff=0.2237;MQ=61.52;MQ0=13;MQRankSum=-0.400;QD=7.46;ReadPosRankSum=0.524;VQSLOD=3.9872;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:38:10.98:49,11,0	1/1:6,0:12:8.82:117,9,0	./.	./.	1/1:14,7:23:9.49:167,9,0	1/1:11,9:26:14.54:295,15,0	0/1:24,12:38:56.70:130,0,57	1/1:33,0:32:16.59:118,17,0	0/1:19,0:22:29.57:49,0,30	1/1:30,0:31:31.91:286,32,0	1/1:16,0:15:3:25,3,0	0/1:34,0:41:41.78:234,0,42	0/1:26,0:32:46.90:94,0,47	1/1:25,1:37:9.43:142,9,0	1/1:21,1:33:15.05:291,15,0	1/1:21,14:39:6.13:611,6,0	0/1:22,15:38:19.38:481,0,19	1/1:16,14:32:15.94:355,16,0	0/0:27,0:26:10.77:0,11,135	0/1:12,0:14:0.96:1,0,173	0/0:60,0:61:50.62:0,51,667	1/1:13,0:15:20.39:134,20,0	1/1:13,0:15:4.24:56,4,0	0/1:30,0:37:99:111,0,126	1/1:22,12:36:15.47:349,15,0	1/1:24,12:38:51.91:774,52,0	0/0:28,0:27:39.11:0,39,579	1/1:7,3:11:3.01:71,3,0
chr10	46471121	.	A	AC	3174.91	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-7.053;DP=601;FS=8.831;HRun=7;HaplotypeScore=81.9708;InbreedingCoeff=0.9889;MQ=78.42;MQ0=1;MQRankSum=-2.234;QD=22.05;ReadPosRankSum=0.635;VQSLOD=3.2615;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:71.60:0,72,686	0/0:7,0:7:15.02:0,15,144	0/0:19,0:17:42.04:0,42,399	0/0:27,0:22:30.91:0,31,287	0/0:18,0:18:48.07:0,48,463	0/0:17,0:17:23.73:0,24,231	0/0:23,0:23:51.06:0,51,486	0/0:27,0:27:72.11:0,72,695	1/1:5,14:19:42.13:504,42,0	0/0:21,0:21:60.08:0,60,574	0/0:11,0:10:24.03:0,24,226	1/1:9,24:33:48.15:579,48,0	1/1:2,25:27:60.18:717,60,0	0/0:27,0:27:63.07:0,63,601	0/0:25,0:25:54.07:0,54,521	0/0:26,0:26:46.02:0,46,588	0/0:26,0:26:75.06:0,75,708	0/0:26,0:26:57.06:0,57,543	0/0:19,0:19:51.08:0,51,492	0/0:11,0:11:27.04:0,27,260	0/0:35,0:35:90.02:0,90,848	1/1:2,22:24:54.17:651,54,0	1/1:3,6:9:12.04:145,12,0	1/1:8,24:32:66.59:765,67,0	0/0:19,0:19:35.89:0,36,347	0/0:18,0:18:51.08:0,51,492	0/0:17,0:16:45.03:0,45,422	0/0:9,0:9:24.03:0,24,231
chr10	46471857	.	T	TATATCC	749.36	PASS	AB=0.928;AC=17;AF=0.500;AN=34;BaseQRankSum=1.305;DP=200;FS=11.528;HRun=0;HaplotypeScore=85.3256;InbreedingCoeff=-0.0606;MQ=72.23;MQ0=0;MQRankSum=-3.224;QD=5.72;ReadPosRankSum=-1.590;VQSLOD=0.6114;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:4,0:4:9.03:0,9,156	0/0:8,0:5:14.97:0,15,161	0/1:18,0:12:11.13:11,0,65	1/1:5,0:5:3:25,3,0	0/1:4,17:25:12.68:350,0,13	1/1:0,18:26:3.01:39,3,0	0/1:11,0:10:9.74:153,0,10	./.	1/1:1,0:1:2.98:21,3,0	./.	./.	./.	./.	0/0:30,0:30:75.21:0,75,1218	1/1:6,0:6:5.99:49,6,0	0/1:13,0:13:22.25:80,0,22	0/1:11,0:11:70.26:70,0,86	0/0:8,0:8:0.89:0,1,84	./.	1/1:3,0:3:2.99:24,3,0	./.	./.	./.	./.	0/1:5,0:5:18.04:18,0,39	0/0:5,0:5:9.02:0,9,93	0/1:6,0:6:31.51:32,0,86
chr10	46471862	.	ATCCATCCATCCGTCCG	A	976.03	PASS	AB=1.000;AC=14;AF=0.467;AN=30;BaseQRankSum=5.931;DP=217;FS=13.046;HRun=0;HaplotypeScore=87.9882;InbreedingCoeff=0.2729;MQ=65.94;MQ0=0;MQRankSum=-4.427;QD=13.37;ReadPosRankSum=-0.971;VQSLOD=0.6675;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:5,0:5:9.03:0,9,431	0/0:9,0:5:12.04:0,12,393	0/0:17,0:11:6.93:0,7,286	./.	0/0:25,0:25:33.11:0,33,1714	0/0:27,0:27:9.50:0,10,604	0/1:9,0:8:46.97:47,0,68	./.	./.	./.	./.	./.	./.	0/0:27,0:27:66.18:0,66,1879	1/1:7,0:7:2.94:18,3,0	0/1:6,0:6:10.98:11,0,30	0/1:10,0:10:24.26:269,0,24	0/1:12,0:12:52.10:52,0,266	./.	./.	./.	1/1:0,7:7:2.94:18,3,0	./.	./.	1/1:8,0:8:5.65:129,6,0	1/1:7,0:7:9.03:229,9,0	1/1:7,0:7:14.94:329,15,0
chr10	46471870	.	ATCCGTCCGTCCGTCCG	A	2451.42	PASS	AB=0.500;AC=25;AF=0.595;AN=42;BaseQRankSum=1.971;DP=254;FS=16.661;HRun=0;HaplotypeScore=92.6293;InbreedingCoeff=0.6856;MQ=62.92;MQ0=3;MQRankSum=-2.041;QD=21.32;ReadPosRankSum=-1.331;VQSLOD=0.8102;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:0,0:8:3:0,3,28	0/0:1,0:5:9.03:0,9,387	0/0:8,0:4:9.03:0,9,324	0/0:19,0:12:6.91:0,7,363	1/1:1,6:7:5.95:53,6,0	0/0:28,0:28:33.10:0,33,1972	0/0:24,0:24:12.04:0,12,793	1/1:4,5:7:15.05:280,15,0	./.	1/1:0,8:8:5.99:73,6,0	1/1:0,5:5:2.92:17,3,0	./.	0/1:0,0:9:0:0,0,0	./.	0/0:10,0:26:30.10:0,30,1297	1/1:0,10:10:6.02:92,6,0	1/1:1,8:9:3.01:54,3,0	1/1:2,7:9:10.29:434,10,0	1/1:8,0:16:20.83:300,21,0	1/1:0,0:5:5.97:57,6,0	./.	./.	0/0:7,0:7:2.50:0,2,9	./.	./.	1/1:0,10:10:21.02:393,21,0	1/1:0,0:9:8.88:340,9,0	1/1:0,7:7:15.05:515,15,0
chr10	46473840	.	C	CG	1526.45	PASS	AC=44;AF=0.880;AN=50;BaseQRankSum=-1.005;DP=178;FS=9.827;HRun=0;HaplotypeScore=37.1779;InbreedingCoeff=0.4941;MQ=95.37;MQ0=2;MQRankSum=-2.868;QD=12.83;ReadPosRankSum=-2.828;VQSLOD=2.4193;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,0:6:11.82:86,12,0	1/1:2,0:2:2.04:6,2,0	0/0:14,0:10:6.11:0,6,105	0/0:9,0:8:6.29:0,6,35	1/1:4,0:4:8.90:60,9,0	1/1:4,0:4:8.94:77,9,0	./.	1/1:4,0:4:8.94:67,9,0	1/1:2,0:2:5.96:45,6,0	1/1:3,0:3:8.92:62,9,0	1/1:1,0:1:2.98:21,3,0	1/1:7,0:7:11.96:95,12,0	1/1:3,0:3:2.74:12,3,0	1/1:8,0:8:5.94:41,6,0	0/0:7,0:7:11.94:0,12,97	1/1:10,0:10:11.96:95,12,0	1/1:12,0:12:26.85:205,27,0	1/1:13,0:13:20.86:157,21,0	1/1:5,0:5:8.96:71,9,0	./.	1/1:11,0:11:23.89:185,24,0	1/1:2,0:2:5.97:46,6,0	1/1:1,0:1:2.97:20,3,0	1/1:8,0:8:20.81:148,21,0	1/1:4,0:4:3:26,3,0	1/1:8,0:8:15.73:112,16,0	1/1:1,0:1:2.96:19,3,0	./.
chr10	46474447	.	A	ACACACACACT	3649.85	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=7.397;DP=828;FS=14.259;HRun=0;HaplotypeScore=249.1816;InbreedingCoeff=-0.2171;MQ=59.70;MQ0=11;MQRankSum=-6.163;QD=7.77;ReadPosRankSum=-5.954;VQSLOD=0.0391;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:23:49.75:50,0,363	0/1:12,0:12:88.01:126,0,88	0/0:48,0:26:67.89:0,68,653	0/0:50,0:29:65.27:0,65,653	0/0:14,0:14:10.74:0,11,74	1/1:18,0:18:21.94:354,22,0	1/1:13,16:37:7.50:306,7,0	0/1:32,0:32:99:178,0,467	0/0:36,0:36:86.72:0,87,962	0/1:22,0:22:99:347,0,234	0/0:12,0:12:21.97:0,22,176	0/0:46,0:46:68.36:0,68,668	0/0:40,0:41:70.98:0,71,734	0/1:29,0:29:94.30:94,0,159	0/0:25,0:25:25.04:0,25,160	0/1:32,0:32:99:100,0,369	0/1:40,0:40:99:377,0,391	0/1:31,0:31:99:251,0,247	0/1:18,0:18:99:125,0,233	0/1:14,0:14:60.30:103,0,60	0/1:72,0:72:16.82:17,0,476	0/0:20,0:20:14.94:0,15,180	0/0:22,0:22:43.37:0,43,373	0/0:44,0:44:98.53:0,99,1091	0/1:21,0:20:99:340,0,100	0/1:28,0:28:99:404,0,228	0/1:24,0:24:60.13:321,0,60	0/1:16,0:16:82.39:157,0,82
chr10	46477638	.	TAAAAAA	T	5243.82	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=12.603;DP=563;FS=0.922;HRun=10;HaplotypeScore=122.0446;InbreedingCoeff=0.9719;MQ=62.71;MQ0=1;MQRankSum=-14.009;QD=39.73;ReadPosRankSum=0.105;VQSLOD=2.9100;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,28:35:57.13:1118,57,0	0/0:5,0:5:12.03:0,12,342	0/0:15,0:11:16.16:0,16,273	0/0:7,0:5:6.02:0,6,131	0/0:26,0:26:63.20:0,63,2037	0/0:22,0:22:60.21:0,60,2077	0/0:11,0:11:27.08:0,27,872	0/0:42,0:43:99:0,102,3520	1/1:4,13:17:36.11:767,36,0	0/0:26,0:26:69.24:0,69,2338	0/0:20,0:20:54.18:0,54,1776	1/1:1,16:17:36.12:767,36,0	1/1:3,17:20:45.15:959,45,0	0/0:17,0:17:51.16:0,51,1693	0/0:14,0:14:39.13:0,39,1379	0/0:33,0:33:93.29:0,93,2993	0/0:32,0:32:93.32:0,93,3112	0/0:25,0:25:72.25:0,72,2449	0/0:23,0:25:72.25:0,72,2326	0/0:20,0:21:51.18:0,51,1686	0/0:9,0:9:27.09:0,27,954	1/1:1,11:12:21.06:422,21,0	1/1:2,15:17:39.08:761,39,0	1/1:2,12:14:24.08:450,24,0	0/0:23,0:23:69.24:0,69,2310	0/0:23,0:23:54.18:0,54,1682	0/0:19,0:19:51.18:0,51,1728	0/0:15,0:15:45.15:0,45,1591
chr10	46483456	.	ACAAGTTCCTGGC	A	1559.26	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=6.652;DP=446;FS=0.000;HRun=0;HaplotypeScore=157.4886;InbreedingCoeff=0.8383;MQ=68.54;MQ0=0;MQRankSum=-4.652;QD=23.27;ReadPosRankSum=0.203;VQSLOD=2.3140;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:78.27:0,78,4303	0/0:4,0:4:9.03:0,9,552	0/0:7,0:7:21.07:0,21,1109	0/0:6,0:6:15.05:0,15,764	0/0:15,0:15:45.15:0,45,2666	0/0:12,0:12:30.10:0,30,1581	0/0:34,0:34:99:0,102,5924	0/0:21,0:21:60.15:0,60,2998	0/0:7,0:7:15.05:0,15,912	0/0:15,0:15:39.13:0,39,2057	0/0:10,0:10:24.08:0,24,1312	0/0:16,0:16:42.13:0,42,2131	0/0:10,0:10:30.10:0,30,1687	0/0:18,0:18:54.19:0,54,2728	0/0:15,0:15:42.14:0,42,2377	0/0:16,0:16:45.15:0,45,2655	0/0:37,0:37:99:0,111,6639	0/0:26,0:26:75.26:0,75,4200	1/1:6,10:16:30.10:919,30,0	1/1:1,2:3:3.01:112,3,0	1/1:15,28:43:2.33:111,2,0	0/0:12,0:12:30.10:0,30,1702	0/0:5,0:5:15.05:0,15,791	0/0:21,0:21:63.22:0,63,3824	0/0:16,0:16:48.16:0,48,2882	0/0:21,0:21:60.21:0,60,3473	1/1:0,5:5:15.05:557,15,0	0/0:7,0:7:9.03:0,9,531
chr10	46485477	.	CT	C	498.89	PASS	AB=0.951;AC=11;AF=0.196;AN=56;BaseQRankSum=-0.812;DP=482;FS=10.706;HRun=14;HaplotypeScore=109.9909;InbreedingCoeff=0.1586;MQ=69.45;MQ0=1;MQRankSum=4.890;QD=3.24;ReadPosRankSum=6.875;VQSLOD=-0.3984;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:23:12.74:82,0,13	0/0:7,0:7:15.02:0,15,139	0/0:16,0:10:6.15:0,6,41	0/0:11,0:11:11.43:0,11,114	0/0:7,0:15:29.40:0,29,177	0/1:8,9:17:69.48:94,0,69	1/1:4,16:22:18.15:233,18,0	0/0:33,0:36:54.44:0,54,321	0/1:10,0:10:7.31:18,0,7	0/0:7,0:14:27.48:0,27,156	0/0:5,0:13:26.37:0,26,144	0/1:30,0:30:42.76:107,0,43	0/1:21,0:21:16.07:16,0,56	0/0:14,0:14:30.91:0,31,193	0/0:20,0:20:54:0,54,489	0/0:8,0:15:23.34:0,23,124	0/0:9,0:31:33.10:0,33,189	0/0:18,0:26:49.94:0,50,281	0/0:14,0:15:2.50:0,2,97	0/0:12,0:12:20.04:0,20,185	0/0:13,0:13:21:0,21,188	1/1:8,0:8:5.35:23,5,0	0/1:4,0:4:4.41:4,0,22	0/1:19,0:19:21.77:70,0,22	0/0:6,0:15:24.34:0,24,144	0/0:14,0:28:59.01:0,59,338	0/0:7,0:7:1.54:0,2,57	0/0:13,0:18:32.24:0,32,193
chr10	46485490	.	TTA	T	1510.35	PASS	AB=0.997;AC=25;AF=0.446;AN=56;BaseQRankSum=-3.237;DP=491;FS=10.277;HRun=0;HaplotypeScore=94.2625;InbreedingCoeff=-0.3462;MQ=75.50;MQ0=2;MQRankSum=4.071;QD=3.87;ReadPosRankSum=0.468;VQSLOD=1.6410;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:24:11.91:78,0,12	0/0:5,0:5:15.05:0,15,255	0/0:22,0:15:28.02:0,28,210	0/0:14,0:14:21.70:0,22,233	0/1:17,0:17:77.30:77,0,94	0/0:17,0:17:41.58:0,42,391	0/0:23,0:23:41.94:0,42,352	0/1:35,0:35:99:217,0,184	1/1:8,2:10:8.96:174,9,0	0/1:18,0:18:83.70:116,0,84	0/1:14,0:14:34.52:35,0,89	0/1:27,0:27:43.40:112,0,43	0/1:15,1:16:42.75:43,0,61	0/1:13,0:13:17.03:17,0,127	0/0:20,0:20:57.17:0,57,926	0/1:14,0:14:27.12:27,0,70	0/1:30,0:30:59.68:60,0,75	0/1:25,0:25:1.33:1,0,168	0/1:14,0:13:36.33:94,0,36	0/1:12,0:12:42.57:43,0,120	0/1:11,0:11:23.47:23,0,99	1/1:7,1:8:17.64:129,18,0	1/1:10,0:10:13.54:182,14,0	0/1:25,0:25:8.30:72,0,8	0/1:17,0:17:54.04:54,0,67	0/1:24,0:24:37.47:37,0,139	0/1:6,0:6:39.98:40,0,41	0/1:20,0:20:48.78:49,0,127
chr10	46485491	.	TA	T	4335.66	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=0.562;DP=443;FS=11.080;HRun=3;HaplotypeScore=72.7674;InbreedingCoeff=0.9137;MQ=77.57;MQ0=2;MQRankSum=-3.186;QD=12.57;ReadPosRankSum=-2.432;VQSLOD=1.9458;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,22:23:33.09:391,33,0	0/0:5,0:5:15.03:0,15,173	0/0:21,0:15:17.79:0,18,171	0/0:13,0:13:19.87:0,20,136	1/1:17,0:17:25.05:157,25,0	0/0:17,0:17:30.53:0,31,243	0/0:23,0:23:39.01:0,39,225	1/1:26,0:26:48.22:378,48,0	1/1:8,2:10:26.88:230,27,0	1/1:16,0:16:12.76:160,13,0	1/1:13,0:13:18.31:124,18,0	1/1:6,17:23:45.07:531,45,0	1/1:4,11:15:14.91:146,15,0	1/1:11,0:11:11.60:72,12,0	0/0:19,0:19:54.14:0,54,639	1/1:10,0:10:18.75:108,19,0	1/1:29,0:29:33.01:214,33,0	1/1:22,0:22:17.95:101,18,0	1/1:12,2:13:28.24:233,28,0	1/1:12,0:12:2.70:85,3,0	1/1:11,0:11:9.03:93,9,0	1/1:1,7:8:23.69:183,24,0	1/1:9,1:10:25.99:224,26,0	1/1:2,21:23:29.46:353,29,0	1/1:13,0:13:15.54:116,16,0	1/1:18,0:19:33.56:209,34,0	1/1:4,1:5:9.88:87,10,0	1/1:14,0:15:23.69:141,24,0
chr10	46486649	.	GC	G	12945.88	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=6.392;DP=635;FS=13.820;HRun=8;HaplotypeScore=69.9170;InbreedingCoeff=0.9787;MQ=82.99;MQ0=0;MQRankSum=-4.294;QD=24.90;ReadPosRankSum=4.409;VQSLOD=4.4569;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,35:38:96.15:927,96,0	0/0:5,0:5:15.05:0,15,181	0/0:16,0:17:30.05:0,30,393	0/0:20,0:19:7.02:0,7,254	1/1:3,20:23:57.09:550,57,0	0/0:24,0:24:69.17:0,69,817	0/0:20,0:20:51.10:0,51,569	1/1:1,24:25:69.07:655,69,0	1/1:2,20:22:57.09:550,57,0	1/1:5,25:30:75.12:724,75,0	1/1:1,19:20:51.08:492,51,0	1/1:3,18:21:39.06:377,39,0	1/1:1,24:25:69.11:666,69,0	1/1:1,18:19:51.08:493,51,0	0/0:28,0:29:78.11:0,78,920	1/1:1,33:34:90.14:869,90,0	1/1:2,31:33:93.15:898,93,0	1/1:1,19:20:54.09:522,54,0	1/1:3,23:26:35.85:623,36,0	1/1:1,21:22:60.10:579,60,0	1/1:1,22:23:57.09:551,57,0	1/1:1,22:23:54.09:522,54,0	1/1:3,17:20:45.07:435,45,0	1/1:2,17:19:48.07:464,48,0	1/1:4,18:22:51.08:492,51,0	1/1:0,20:20:60.07:573,60,0	1/1:0,25:25:72.12:695,72,0	1/1:0,10:10:30.05:290,30,0
chr10	46490024	.	TA	T	6767.63	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=6.118;DP=435;FS=4.075;HRun=5;HaplotypeScore=83.4746;InbreedingCoeff=0.9243;MQ=73.55;MQ0=11;MQRankSum=1.525;QD=24.00;ReadPosRankSum=1.097;VQSLOD=3.8944;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,27:29:60.10:640,60,0	0/0:7,0:7:21.07:0,21,281	0/0:58,0:16:37.60:0,38,332	0/0:51,0:21:25.23:0,25,292	1/1:2,16:18:47.93:455,48,0	0/0:21,0:20:63.17:0,63,808	0/0:9,0:9:24.07:0,24,311	1/1:5,29:34:89.96:858,90,0	1/1:1,6:7:18.03:192,18,0	1/1:1,11:12:36.02:355,36,0	1/1:3,12:15:40.35:378,40,0	1/1:2,5:7:15.02:158,15,0	1/1:5,3:8:17.95:165,18,0	1/1:1,4:5:9:84,9,0	0/0:7,0:7:21.06:0,21,271	1/1:1,6:7:12.01:124,12,0	1/1:1,20:21:57.09:618,57,0	1/1:2,11:13:30.07:323,30,0	1/1:13,4:17:44.56:357,45,0	1/1:7,11:17:40.70:337,41,0	1/1:0,3:3:9.02:100,9,0	1/1:0,5:5:14.91:116,15,0	1/1:1,4:5:8.99:79,9,0	1/1:0,4:4:6:57,6,0	1/1:3,11:14:36.07:385,36,0	1/1:2,16:18:50.06:483,50,0	1/1:5,11:16:35.80:335,36,0	1/1:0,6:6:15.04:169,15,0
chr10	46490028	.	AAT	A	6643.22	PASS	AB=0.857;AC=43;AF=0.768;AN=56;BaseQRankSum=5.366;DP=437;FS=11.770;HRun=0;HaplotypeScore=92.9537;InbreedingCoeff=0.7782;MQ=72.38;MQ0=11;MQRankSum=0.311;QD=23.64;ReadPosRankSum=3.520;VQSLOD=4.9979;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:28,1:29:58.84:564,59,0	0/0:7,0:7:21.07:0,21,418	0/0:63,0:17:43.81:0,44,582	0/0:50,0:20:19.09:0,19,419	1/1:18,0:18:31.37:477,31,0	0/0:21,0:20:63.19:0,63,1190	0/0:8,0:8:24.07:0,24,449	1/1:32,2:34:78.76:967,79,0	1/1:8,0:8:1.63:154,2,0	1/1:11,1:12:35.84:396,36,0	1/1:14,1:15:43.82:366,44,0	1/1:6,0:6:4.27:131,4,0	1/1:5,1:6:17.86:159,18,0	0/1:5,1:6:1.32:109,0,1	0/0:7,0:7:21.07:0,21,422	1/1:7,0:7:1.60:102,2,0	1/1:21,1:22:46.69:492,47,0	1/1:11,1:12:29.99:297,30,0	1/1:5,6:16:37:411,37,0	1/1:12,1:15:41.64:367,42,0	1/1:4,0:4:8.95:77,9,0	1/1:5,0:5:14.90:152,15,0	1/1:4,0:4:9.02:123,9,0	1/1:4,0:4:6.01:73,6,0	1/1:13,0:13:38.20:310,38,0	1/1:17,1:18:50.78:543,51,0	1/1:16,0:20:7.18:249,7,0	1/1:6,0:6:14.95:124,15,0
chr10	46491323	.	GGCCC	G	13536.84	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=15.639;DP=503;FS=0.000;HRun=0;HaplotypeScore=161.5722;InbreedingCoeff=0.9929;MQ=83.49;MQ0=1;MQRankSum=-16.781;QD=37.39;ReadPosRankSum=2.747;VQSLOD=4.9882;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,22:23:59.95:830,60,0	0/0:10,0:10:30.10:0,30,870	0/0:20,0:20:60.15:0,60,1562	0/0:28,0:28:71.98:0,72,2026	1/1:1,11:11:30.10:403,30,0	0/0:31,0:31:93.31:0,93,2632	0/0:26,0:26:78.27:0,78,2261	1/1:0,19:19:57.19:831,57,0	1/1:0,18:17:51.17:708,51,0	1/1:1,15:16:45.14:629,45,0	1/1:2,9:12:30.07:356,30,0	1/1:2,19:21:57.66:781,58,0	1/1:2,16:18:53.65:696,54,0	1/1:1,19:20:57.16:756,57,0	0/0:26,0:26:78.23:0,78,2121	1/1:2,23:25:69.23:956,69,0	1/1:1,18:19:57.19:783,57,0	1/1:2,12:13:33.11:474,33,0	1/1:0,9:9:27.09:392,27,0	1/1:1,13:14:40.95:541,41,0	1/1:1,12:12:33.11:448,33,0	1/1:2,9:11:29.75:342,30,0	1/1:1,16:17:45.15:614,45,0	1/1:1,15:16:29.56:374,30,0	1/1:1,17:18:54.17:725,54,0	1/1:1,27:28:81.27:1143,81,0	1/1:0,14:14:42.14:588,42,0	1/1:1,3:4:12.04:167,12,0
chr10	46491328	.	AG	A	6806.58	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=16.271;DP=499;FS=0.368;HRun=1;HaplotypeScore=158.1709;InbreedingCoeff=0.9865;MQ=82.05;MQ0=3;MQRankSum=-16.306;QD=18.96;ReadPosRankSum=2.664;VQSLOD=5.0916;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,22:22:59.41:413,59,0	0/0:10,0:10:30.08:0,30,433	0/0:19,1:20:35.23:0,35,827	0/0:28,0:27:60.57:0,61,1119	1/1:2,11:12:32.53:215,33,0	0/0:30,0:30:90.31:0,90,1434	0/0:28,0:28:84.27:0,84,1315	1/1:1,19:20:59.75:460,60,0	1/1:0,18:17:50.51:353,51,0	1/1:0,15:15:41.54:304,42,0	1/1:1,9:10:25.34:146,25,0	1/1:2,19:21:62.27:424,62,0	1/1:1,16:17:50.49:349,50,0	1/1:0,19:19:52.97:357,53,0	0/0:24,0:24:72.25:0,72,1147	1/1:0,23:23:68.33:475,68,0	1/1:2,18:20:53.36:382,53,0	1/1:2,12:13:32.81:244,33,0	1/1:1,9:10:29.85:225,30,0	1/1:0,13:13:38.59:265,39,0	1/1:1,12:12:32.52:218,33,0	1/1:0,9:9:22.94:139,23,0	1/1:0,16:16:44.42:300,44,0	1/1:2,15:17:25.83:171,26,0	1/1:1,18:18:52.98:350,53,0	1/1:1,27:28:83.14:598,83,0	1/1:4,14:17:50.30:356,50,0	1/1:0,3:3:8.93:65,9,0
chr10	46494374	.	GA	G	8892.79	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=0.797;DP=525;FS=0.000;HRun=10;HaplotypeScore=58.4144;InbreedingCoeff=0.9726;MQ=75.59;MQ0=2;MQRankSum=-2.620;QD=19.85;ReadPosRankSum=3.422;VQSLOD=5.6371;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,23:27:59.99:521,60,0	0/0:4,0:4:12.03:0,12,133	0/0:26,0:14:14.73:0,15,137	0/0:29,0:19:13.32:0,13,121	1/1:3,18:21:50.98:443,51,0	1/1:0,16:16:44.99:390,45,0	1/1:2,15:17:35.99:312,36,0	1/1:6,21:27:62.96:543,63,0	1/1:2,7:9:17.99:156,18,0	1/1:5,18:23:53.98:467,54,0	1/1:2,16:18:47.99:416,48,0	1/1:3,17:20:44.98:391,45,0	1/1:3,19:22:47.99:417,48,0	1/1:4,20:24:59.98:520,60,0	0/0:18,0:18:45.12:0,45,497	1/1:1,15:16:35.99:313,36,0	1/1:5,11:16:29.96:260,30,0	1/1:4,22:26:59.99:521,60,0	1/1:3,16:19:44.97:390,45,0	1/1:3,18:21:50.97:442,51,0	1/1:4,11:15:26.99:234,27,0	1/1:4,9:13:20.99:182,21,0	1/1:2,11:13:29.99:260,30,0	1/1:2,11:13:23.69:208,24,0	1/1:2,35:38:86.98:755,87,0	1/1:2,14:16:41.97:360,42,0	1/1:1,10:11:26.99:234,27,0	1/1:1,6:7:17.99:156,18,0
chr10	46494543	.	GA	G	4771.27	PASS	AB=0.741;AC=44;AF=0.786;AN=56;BaseQRankSum=6.083;DP=390;FS=0.595;HRun=9;HaplotypeScore=85.6307;InbreedingCoeff=0.6576;MQ=44.82;MQ0=23;MQRankSum=-6.201;QD=14.73;ReadPosRankSum=3.695;VQSLOD=5.0644;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,24:26:40.15:506,40,0	0/1:6,1:7:6.47:6,0,152	0/0:4,1:2:2.97:0,3,9	0/0:7,0:3:2.22:0,2,7	0/1:6,11:17:19.61:95,0,20	0/0:18,0:16:39.11:0,39,442	0/0:21,0:18:39.03:0,39,405	1/1:5,20:25:54.01:493,54,0	1/1:7,0:6:5.96:50,6,0	1/1:3,7:10:17.99:164,18,0	1/1:3,7:10:11.99:110,12,0	1/1:6,11:16:36:326,36,0	1/1:2,5:5:8.99:78,9,0	1/1:6,9:15:29.99:273,30,0	0/0:15,0:15:42.04:0,42,455	1/1:6,10:16:30:274,30,0	1/1:7,8:14:27:245,27,0	1/1:6,12:18:30:274,30,0	1/1:8,12:17:36.01:327,36,0	1/1:2,8:9:18.01:165,18,0	1/1:3,7:8:5.98:55,6,0	1/1:6,8:14:17.82:164,18,0	1/1:4,7:11:17.02:166,17,0	1/1:8,7:13:13.38:179,13,0	1/1:4,5:8:12.01:109,12,0	1/1:4,9:11:24.01:219,24,0	1/1:3,13:16:33.01:301,33,0	1/1:3,8:9:21:192,21,0
chr10	46494556	.	CCAA	C	747.59	PASS	AB=0.975;AC=19;AF=0.339;AN=56;BaseQRankSum=3.396;DP=460;FS=23.054;HRun=0;HaplotypeScore=122.5758;InbreedingCoeff=-0.0768;MQ=48.46;MQ0=28;MQRankSum=-4.516;QD=2.84;ReadPosRankSum=3.204;VQSLOD=0.4784;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:32,0:28:20.84:21,0,129	0/0:7,0:7:9.81:0,10,131	0/0:20,0:6:12.37:0,12,103	0/0:16,0:8:15.03:0,15,202	0/1:18,1:19:88.51:97,0,89	0/0:22,0:19:43.99:0,44,501	0/0:21,0:20:23.03:0,23,386	0/1:27,2:30:91.24:91,0,106	1/1:5,0:4:4.25:16,4,0	0/1:11,1:12:37.07:87,0,37	1/1:10,0:10:8.07:100,8,0	0/1:18,0:16:23.01:23,0,33	0/0:11,0:8:0.02:0,0,30	0/1:16,0:17:44.51:87,0,45	0/0:15,0:14:38.52:0,39,302	1/1:19,0:19:10.95:108,11,0	0/1:17,0:16:29.03:60,0,29	0/1:20,0:20:30.86:79,0,31	0/0:27,0:24:25.61:0,26,130	0/0:10,0:9:11.99:0,12,88	0/1:9,0:8:5.65:6,0,12	0/1:16,0:16:9.22:27,0,9	0/1:12,0:11:18.55:19,0,42	0/0:15,0:13:8.24:0,8,59	0/1:6,0:5:0.24:24,0,0	0/1:20,0:19:55.37:67,0,55	0/0:20,0:20:9.67:0,10,80	0/0:13,0:10:2.93:0,3,95
chr10	46494557	.	CAAA	C	4388.80	PASS	AB=0.620;AC=43;AF=0.768;AN=56;BaseQRankSum=3.156;DP=464;FS=15.539;HRun=17;HaplotypeScore=112.0410;InbreedingCoeff=0.5980;MQ=49.64;MQ0=28;MQRankSum=-7.495;QD=12.02;ReadPosRankSum=0.949;VQSLOD=1.1140;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,1:28:7.28:313,7,0	0/1:3,1:7:19.41:21,0,19	0/0:22,0:7:15.38:0,15,121	0/0:17,0:8:15.04:0,15,188	1/1:6,9:18:5.20:223,5,0	0/0:10,0:19:30.86:0,31,257	0/0:12,1:20:4.07:0,4,183	1/1:10,16:30:45.83:447,46,0	0/1:2,0:5:16.75:40,0,17	1/1:4,8:12:23.96:246,24,0	1/1:1,9:10:24:246,24,0	1/1:6,0:16:29.11:174,29,0	1/1:4,0:8:11.66:69,12,0	1/1:6,8:17:28.86:245,29,0	0/0:7,0:14:12.21:0,12,59	1/1:3,14:19:34.09:349,34,0	1/1:4,11:16:29.80:281,30,0	1/1:8,11:19:29.37:275,29,0	1/1:13,0:24:40.74:240,41,0	1/1:5,0:9:11.58:70,12,0	1/1:3,0:9:20.31:114,20,0	1/1:5,1:16:29.20:187,29,0	1/1:5,1:11:20.40:130,20,0	0/1:6,1:13:5.58:55,0,6	1/1:3,3:5:8.96:92,9,0	1/1:8,9:19:12.09:284,12,0	1/1:5,0:20:37.90:226,38,0	1/1:9,3:10:5.69:61,6,0
chr10	46495617	.	G	GA	13170.04	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-10.113;DP=677;FS=7.964;HRun=8;HaplotypeScore=73.4266;InbreedingCoeff=0.9950;MQ=73.03;MQ0=0;MQRankSum=-1.555;QD=27.96;ReadPosRankSum=-0.014;VQSLOD=5.0130;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,38:43:99:1330,117,0	0/0:7,0:7:21.01:0,21,192	0/0:23,0:20:30.41:0,30,259	0/0:17,0:16:14.34:0,14,195	1/1:5,20:26:60.02:634,60,0	0/0:23,0:23:60.02:0,60,549	0/0:26,0:26:63.02:0,63,576	1/1:7,31:38:96.25:1082,96,0	1/1:7,19:26:63.19:725,63,0	1/1:0,16:16:45.07:476,45,0	1/1:3,14:17:44.92:498,45,0	1/1:7,19:26:72.14:794,72,0	1/1:8,16:24:62.84:693,63,0	1/1:5,32:37:78.23:900,78,0	0/0:31,0:31:84.04:0,84,769	1/1:4,27:31:72.08:831,72,0	1/1:1,41:43:89.88:1285,90,0	1/1:6,17:23:39.12:450,39,0	0/0:10,0:11:26.02:0,26,220	0/0:16,0:16:39.02:0,39,357	0/0:24,0:24:28.43:0,28,515	1/1:1,21:23:60.01:673,60,0	1/1:5,13:19:41.95:460,42,0	1/1:3,22:25:69.20:794,69,0	1/1:1,18:19:51.15:588,51,0	1/1:4,25:29:66.20:761,66,0	0/0:26,0:25:72.02:0,72,654	1/1:1,5:6:18.04:198,18,0
chr10	46495705	.	GA	G	10030.77	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=15.308;DP=739;FS=0.276;HRun=3;HaplotypeScore=82.5588;InbreedingCoeff=0.9999;MQ=70.18;MQ0=0;MQRankSum=-1.824;QD=35.95;ReadPosRankSum=2.071;VQSLOD=5.3385;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,36:38:99:1375,111,0	0/0:11,0:11:33.11:0,33,475	0/0:19,0:18:41.14:0,41,520	0/0:26,0:21:46.14:0,46,651	0/0:25,0:25:72.24:0,72,1013	0/0:31,0:31:93.28:0,93,1302	0/0:33,0:33:99:0,99,1361	0/0:32,0:32:93.28:0,93,1269	1/1:1,24:25:75.23:918,75,0	0/0:33,0:33:99:0,99,1395	0/0:21,0:21:63.20:0,63,885	1/1:0,30:30:87.27:1078,87,0	1/1:0,24:24:72.23:892,72,0	0/0:36,0:36:99:0,99,1399	0/0:21,0:21:63.21:0,63,903	0/0:36,0:36:99:0,108,1555	0/0:42,0:42:99:0,120,1728	0/0:27,0:27:75.23:0,75,1051	1/1:2,12:14:36.09:422,36,0	1/1:0,25:25:75.24:927,75,0	1/1:0,35:35:99:1264,102,0	1/1:2,21:23:63.13:761,63,0	1/1:4,13:17:51.13:611,51,0	1/1:1,21:22:66.21:816,66,0	0/0:26,0:25:69.23:0,69,990	0/0:30,0:30:87.29:0,87,1238	1/1:0,26:26:78.25:966,78,0	0/0:11,0:11:33.11:0,33,475
chr10	46496291	.	CAAACA	C	2430.94	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.382;DP=694;FS=1.914;HRun=0;HaplotypeScore=125.9091;InbreedingCoeff=0.9951;MQ=87.70;MQ0=0;MQRankSum=-6.362;QD=45.02;ReadPosRankSum=-0.482;VQSLOD=3.8124;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,102,2941	0/0:12,0:12:33.11:0,33,1007	0/0:25,0:25:58.73:0,59,1584	0/0:30,0:29:78.06:0,78,2073	0/0:21,0:21:63.20:0,63,1876	1/1:1,25:26:69.17:1402,69,0	1/1:1,27:28:66.03:1151,66,0	0/0:38,0:38:99:0,99,2693	0/0:21,0:21:60.20:0,60,1785	0/0:27,0:27:63.21:0,63,1850	0/0:14,0:14:36.12:0,36,1111	0/0:22,0:22:66.23:0,66,2027	0/0:20,0:20:60.21:0,60,1849	0/0:44,0:44:99:0,123,3531	0/0:30,0:30:84.28:0,84,2527	0/0:32,0:32:90.31:0,90,2713	0/0:40,0:40:99:0,117,3362	0/0:32,0:31:87.29:0,87,2486	0/0:20,0:20:60.21:0,60,1787	0/0:9,0:9:27.08:0,27,764	0/0:28,0:28:84.24:0,84,2365	0/0:13,0:13:36.12:0,36,1113	0/0:16,0:16:42.14:0,42,1276	0/0:41,0:41:99:0,120,3477	0/0:17,0:17:48.14:0,48,1408	0/0:28,0:28:81.25:0,81,2233	0/0:18,0:18:54.17:0,54,1599	0/0:6,0:6:18.06:0,18,536
chr10	46498213	.	C	CT	3573.19	PASS	AB=0.724;AC=39;AF=0.696;AN=56;BaseQRankSum=0.268;DP=551;FS=0.000;HRun=14;HaplotypeScore=66.4298;InbreedingCoeff=0.4614;MQ=53.55;MQ0=15;MQRankSum=1.397;QD=7.91;ReadPosRankSum=0.184;VQSLOD=2.5564;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:37,0:37:65.75:344,66,0	0/0:7,0:7:17.37:0,17,105	0/0:19,0:3:2.81:0,3,14	0/0:20,0:11:6.14:0,6,28	0/1:18,5:22:22.10:169,0,22	0/0:4,0:14:20.80:0,21,70	0/0:13,0:19:26.81:0,27,114	1/1:18,14:32:31.29:331,31,0	1/1:13,0:13:33.78:161,34,0	1/1:7,10:18:20.28:208,20,0	1/1:17,2:19:14.09:201,14,0	1/1:18,0:18:28.59:150,29,0	1/1:19,0:18:34.67:192,35,0	1/1:3,9:12:3.89:28,4,0	0/0:16,1:17:6.16:0,6,165	0/1:13,4:16:17.70:111,0,18	1/1:5,21:26:24:211,24,0	0/1:14,18:30:14.23:182,0,14	1/1:11,0:20:26.78:127,27,0	1/1:9,1:18:0.91:69,1,0	1/1:3,1:20:12.06:67,12,0	1/1:16,0:15:26.16:156,26,0	1/1:14,0:14:34.52:197,35,0	1/1:22,0:22:37.14:190,37,0	0/1:10,10:20:10.16:83,0,10	1/1:8,9:18:16.32:138,16,0	1/1:9,0:15:11.42:58,11,0	0/1:8,8:16:5.40:199,0,5
chr10	46498218	.	T	TC	3448.04	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=-6.003;DP=551;FS=0.000;HRun=0;HaplotypeScore=64.5012;InbreedingCoeff=0.8271;MQ=51.58;MQ0=22;MQRankSum=0.712;QD=22.39;ReadPosRankSum=8.146;VQSLOD=4.5846;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,38:38:72.14:882,72,0	0/0:6,0:6:18.06:0,18,236	0/0:19,0:3:8.67:0,9,61	0/0:21,0:10:16.56:0,17,143	0/0:25,0:24:26.73:0,27,298	0/0:14,0:14:32.94:0,33,283	0/0:21,0:20:53.83:0,54,492	0/0:31,0:31:56.03:0,56,445	1/1:0,14:14:36.12:453,36,0	0/0:17,0:17:20.66:0,21,152	0/0:22,0:21:35.97:0,36,272	1/1:0,15:15:30.10:376,30,0	1/1:2,18:19:36.06:450,36,0	0/0:11,0:11:1.44:0,1,27	0/0:16,0:16:39.54:0,40,489	0/1:16,0:15:1.74:2,0,171	0/0:24,0:24:2.22:0,2,66	0/0:33,0:30:28.06:0,28,278	0/0:21,0:18:45.26:0,45,307	0/0:17,0:16:25.85:0,26,221	0/0:22,0:20:12.12:0,12,73	1/1:1,14:14:30.01:352,30,0	1/1:0,15:15:38.95:444,39,0	1/1:0,20:20:39.12:490,39,0	0/0:19,0:18:10.42:0,10,134	0/0:18,0:17:27.21:0,27,222	0/0:16,0:15:32.23:0,32,241	0/0:24,0:20:4.43:0,4,159
chr10	46498434	.	ACAT	A	2111.91	PASS	AB=0.717;AC=23;AF=0.411;AN=56;BaseQRankSum=9.326;DP=193;FS=30.910;HRun=0;HaplotypeScore=110.1355;InbreedingCoeff=-0.4854;MQ=43.11;MQ0=1;MQRankSum=-5.179;QD=15.19;ReadPosRankSum=-4.659;VQSLOD=1.0058;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:13,2:15:72.83:73,0,383	0/1:2,2:4:58.76:89,0,59	0/0:11,0:7:9.07:0,9,377	0/1:8,0:6:31.15:31,0,322	0/1:3,2:5:72.50:72,0,121	0/1:6,4:10:99:140,0,182	0/0:8,0:7:6.02:0,6,136	0/0:11,0:11:27.09:0,27,586	0/1:5,3:8:99:103,0,121	0/1:7,2:8:69.36:69,0,254	0/1:4,3:6:55.77:135,0,56	1/1:2,2:4:6.02:98,6,0	0/1:1,2:3:58.79:89,0,59	0/1:3,3:6:99:129,0,185	0/1:2,3:5:55.74:122,0,56	0/1:6,2:8:74.44:74,0,124	0/0:8,0:8:12.04:0,12,271	0/1:6,1:7:42.96:43,0,62	0/0:1,1:2:3.01:0,3,68	0/1:2,5:7:49.70:225,0,50	0/0:6,0:6:15.05:0,15,339	0/1:2,5:7:99:209,0,115	0/1:4,2:6:81.61:82,0,188	0/0:8,0:8:9.03:0,9,203	0/1:2,2:4:58.74:77,0,59	0/1:2,2:4:58.98:88,0,59	1/1:3,2:5:6.02:98,6,0	0/1:2,5:7:49.92:227,0,50
chr10	46498460	.	TA	T	829.46	PASS	AB=0.683;AC=8;AF=0.143;AN=56;BaseQRankSum=3.629;DP=265;FS=25.133;HRun=2;HaplotypeScore=197.9103;InbreedingCoeff=0.0808;MQ=36.40;MQ0=2;MQRankSum=-2.117;QD=12.96;ReadPosRankSum=1.001;VQSLOD=0.9273;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:12,4:16:99:125,0,239	0/0:5,0:5:12.03:0,12,163	0/0:15,0:8:15.05:0,15,225	0/0:10,0:7:21.07:0,21,315	0/0:10,0:10:11.93:0,12,155	0/0:14,0:14:33.11:0,33,493	0/0:9,0:8:12.04:0,12,179	0/0:13,0:10:24.08:0,24,360	0/1:5,3:8:74.71:101,0,75	0/0:14,0:14:36.12:0,36,539	0/0:7,0:7:15.05:0,15,224	1/1:0,6:6:15.05:194,15,0	0/1:1,4:5:29.85:140,0,30	0/0:8,0:8:21.07:0,21,314	0/0:7,0:7:14.92:0,15,224	0/0:8,0:8:18.06:0,18,262	0/0:12,0:11:11.84:0,12,179	0/0:7,0:7:6.02:0,6,90	0/0:6,0:5:15.05:0,15,225	0/0:17,0:17:44.30:0,44,559	0/0:6,0:6:12.04:0,12,180	0/1:2,6:8:65.71:209,0,66	0/1:4,7:11:99:170,0,111	0/1:8,2:10:29.72:30,0,81	0/0:5,0:5:15.05:0,15,224	0/0:10,0:10:27.09:0,27,404	0/0:11,0:11:27.05:0,27,379	0/0:7,0:7:15.05:0,15,225
chr10	46498487	.	T	TCC	7926.83	PASS	AB=0.595;AC=31;AF=0.554;AN=56;BaseQRankSum=9.299;DP=220;FS=83.919;HRun=0;HaplotypeScore=194.7474;InbreedingCoeff=-0.4613;MQ=47.95;MQ0=0;MQRankSum=-6.258;QD=38.86;ReadPosRankSum=7.800;VQSLOD=1.3254;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:6,6:12:73.57:320,0,74	0/1:1,4:5:33.73:220,0,34	0/0:7,0:4:3.01:0,3,49	0/0:6,0:3:4.26:0,4,42	0/1:1,9:10:27.66:304,0,28	0/1:3,8:11:99:426,0,113	0/1:3,4:7:76.63:263,0,77	1/1:0,4:3:9.03:172,9,0	0/1:2,5:7:76.50:262,0,76	0/1:3,9:12:99:469,0,101	0/1:1,5:6:36.69:164,0,37	1/1:0,7:7:21.07:399,21,0	0/1:1,4:5:21.78:214,0,22	0/1:3,5:9:99:263,0,122	0/1:1,5:6:30.77:268,0,31	0/1:2,4:6:79.60:211,0,80	0/1:5,5:10:99:203,0,125	0/1:2,1:3:42.86:52,0,43	1/1:0,5:5:15.05:265,15,0	0/1:2,15:17:17.58:808,0,18	0/0:3,0:3:3.01:0,3,49	0/1:2,9:11:64.54:491,0,65	0/1:3,9:12:99:478,0,110	0/1:5,3:8:48.18:48,0,89	1/1:1,6:7:17.99:307,18,0	1/1:0,8:8:24.08:462,24,0	1/1:0,9:9:27.09:524,27,0	0/1:1,6:7:27.85:331,0,28
chr10	46498502	.	AC	A	4333.97	PASS	AB=0.817;AC=50;AF=0.893;AN=56;BaseQRankSum=5.345;DP=180;FS=1.203;HRun=1;HaplotypeScore=173.1056;InbreedingCoeff=0.2965;MQ=54.32;MQ0=1;MQRankSum=-4.331;QD=24.77;ReadPosRankSum=4.371;VQSLOD=4.8570;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,4:8:12.47:131,12,0	1/1:0,4:4:11.99:128,12,0	0/1:7,0:4:0.20:0,0,59	0/0:5,0:2:3:0,3,28	1/1:1,8:8:15.05:187,15,0	1/1:3,6:9:21.07:259,21,0	1/1:0,5:5:9.03:112,9,0	1/1:1,3:4:6.56:108,7,0	1/1:1,4:5:12.04:149,12,0	0/1:2,8:10:21.25:267,0,21	1/1:0,2:2:2.97:20,3,0	1/1:0,5:5:15.05:186,15,0	1/1:0,4:4:12.04:147,12,0	1/1:1,6:7:12.51:151,13,0	1/1:0,5:5:15:167,15,0	1/1:1,4:5:12:130,12,0	1/1:5,6:11:15.05:185,15,0	1/1:1,1:2:3.01:38,3,0	0/1:3,2:5:3.15:97,0,3	1/1:1,14:15:35.95:418,36,0	0/1:3,0:3:0:0,0,0	1/1:1,6:7:18.06:227,18,0	1/1:1,8:9:18.02:213,18,0	1/1:3,3:6:6.02:74,6,0	1/1:0,6:6:15.05:188,15,0	1/1:1,7:8:14.56:243,15,0	1/1:0,8:8:24.08:298,24,0	1/1:0,6:6:18.02:212,18,0
chr10	46498504	.	AG	A	4395.15	PASS	AB=0.733;AC=50;AF=0.926;AN=54;BaseQRankSum=2.878;DP=175;FS=4.996;HRun=2;HaplotypeScore=168.9354;InbreedingCoeff=0.3182;MQ=54.61;MQ0=1;MQRankSum=-3.373;QD=26.48;ReadPosRankSum=2.850;VQSLOD=4.5279;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,2:7:9.03:110,9,0	1/1:4,0:4:9.03:112,9,0	0/1:6,2:4:22.38:22,0,68	0/0:6,1:2:2.98:0,3,22	1/1:9,0:8:15.04:182,15,0	1/1:8,0:8:21.07:257,21,0	1/1:5,0:5:9.03:111,9,0	1/1:3,1:4:12.04:150,12,0	1/1:5,0:5:12.04:147,12,0	1/1:8,1:9:27.09:337,27,0	./.	1/1:5,0:5:15.05:185,15,0	1/1:4,0:4:12.04:149,12,0	1/1:7,0:7:12.04:146,12,0	1/1:5,0:5:12.04:149,12,0	1/1:4,0:4:9.03:112,9,0	1/1:7,3:10:15.05:185,15,0	1/1:1,1:2:3.01:37,3,0	1/1:2,3:5:15.05:189,15,0	1/1:15,0:15:30.09:362,30,0	0/1:1,1:2:0:0,0,0	1/1:6,0:6:18.06:219,18,0	1/1:8,0:8:15.05:181,15,0	1/1:4,2:6:6.02:74,6,0	1/1:6,0:6:15.05:183,15,0	1/1:7,1:8:24.08:301,24,0	1/1:8,0:8:24.07:295,24,0	1/1:6,0:6:18.01:202,18,0
chr10	46498944	.	TC	T	23070.09	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=10.514;DP=809;FS=0.000;HRun=2;HaplotypeScore=104.7183;InbreedingCoeff=0.9995;MQ=82.01;MQ0=0;MQRankSum=-3.405;QD=35.17;ReadPosRankSum=4.511;VQSLOD=4.7226;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,43:43:99:1519,117,0	0/0:8,0:8:24.08:0,24,357	0/0:26,0:26:69.13:0,69,961	0/0:22,0:21:53.52:0,54,699	1/1:0,26:26:60.19:779,60,0	0/0:26,0:26:75.25:0,75,1122	0/0:30,0:30:90.28:0,90,1306	1/1:0,40:40:99:1469,117,0	1/1:1,25:26:75.24:974,75,0	1/1:0,40:40:99:1501,117,0	1/1:0,12:12:33.11:428,33,0	1/1:0,32:32:87.28:1130,87,0	1/1:2,26:28:78.17:991,78,0	1/1:0,39:39:99:1403,108,0	0/0:41,0:41:99:0,123,1842	1/1:0,39:39:99:1364,105,0	1/1:0,37:37:99:1286,99,0	1/1:1,25:26:72.23:935,72,0	1/1:1,19:20:57.17:723,57,0	1/1:0,18:18:54.18:701,54,0	1/1:0,41:41:99:1441,111,0	1/1:3,28:31:81.25:1038,81,0	1/1:0,19:19:45.14:584,45,0	1/1:0,41:41:99:1480,114,0	1/1:2,21:23:48.16:623,48,0	1/1:0,22:22:66.20:841,66,0	1/1:1,33:34:87.28:1130,87,0	1/1:1,18:19:57.18:730,57,0
chr10	46502239	.	GCC	G	5750.92	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=6.156;DP=471;FS=2.264;HRun=11;HaplotypeScore=64.8056;InbreedingCoeff=0.9010;MQ=68.38;MQ0=2;MQRankSum=0.880;QD=24.58;ReadPosRankSum=7.479;VQSLOD=4.4092;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:29:62.17:0,62,862	0/0:4,0:6:14.50:0,15,168	0/1:19,0:8:14.97:15,0,45	0/0:14,0:11:6.23:0,6,64	1/1:2,21:23:51.10:539,51,0	0/0:8,0:10:21.06:0,21,285	0/0:10,0:18:36.05:0,36,389	1/1:5,13:18:36.05:375,36,0	0/0:21,0:22:56.61:0,57,748	1/1:0,17:17:51.13:543,51,0	1/1:2,13:15:36.07:383,36,0	0/0:19,0:20:50.61:0,51,682	0/0:18,0:18:48.14:0,48,710	1/1:1,15:16:39.09:415,39,0	0/0:17,0:17:39.13:0,39,598	1/1:0,14:14:42.11:447,42,0	1/1:5,43:47:99:1245,117,0	1/1:3,18:21:51.12:543,51,0	0/0:10,0:11:23.75:0,24,326	0/0:9,0:9:15.05:0,15,228	0/0:15,0:17:13.64:0,14,308	0/0:6,0:6:12.93:0,13,185	0/0:11,0:12:29.59:0,30,423	0/0:12,0:15:31.57:0,32,386	1/1:2,13:15:39.10:415,39,0	1/1:1,20:21:60.15:638,60,0	0/0:13,0:13:33.10:0,33,487	1/1:1,6:7:18.04:192,18,0
chr10	46502541	.	T	TC	1098.67	PASS	AB=0.927;AC=9;AF=0.161;AN=56;BaseQRankSum=-2.790;DP=597;FS=35.885;HRun=0;HaplotypeScore=82.0210;InbreedingCoeff=0.0678;MQ=49.68;MQ0=10;MQRankSum=2.565;QD=6.87;ReadPosRankSum=4.344;VQSLOD=1.7012;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:27:99:138,0,162	0/0:6,0:5:14.06:0,14,75	0/0:24,0:3:6.01:0,6,62	0/0:23,0:8:13.11:0,13,85	0/0:28,0:27:61.79:0,62,410	0/1:26,0:26:99:215,0,123	0/1:15,0:15:81.97:94,0,82	0/0:50,0:48:98.48:0,98,740	0/1:19,0:19:7.79:166,0,8	0/0:22,0:22:43.90:0,44,348	0/0:16,0:15:26.65:0,27,150	0/1:18,1:19:41.05:125,0,41	0/1:16,1:17:31.22:172,0,31	0/0:29,0:29:69.55:0,70,474	0/0:28,0:27:56.61:0,57,402	0/0:16,0:16:31.49:0,31,197	0/0:21,0:21:50.53:0,51,351	0/0:23,0:22:49.28:0,49,312	0/0:13,0:11:23.50:0,23,177	0/0:16,0:16:41.48:0,41,251	0/0:6,0:6:11.04:0,11,67	0/1:6,13:19:37.79:107,0,38	1/1:17,0:17:25.48:228,25,0	0/0:9,12:22:4.64:0,5,28	0/0:25,0:24:51.38:0,51,305	0/0:35,0:34:84.65:0,85,622	0/0:29,0:29:64.07:0,64,424	0/0:5,0:5:10.08:0,10,48
chr10	46502681	.	C	CT	15692.65	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-11.822;DP=611;FS=7.692;HRun=6;HaplotypeScore=56.0848;InbreedingCoeff=0.9989;MQ=71.00;MQ0=0;MQRankSum=-2.973;QD=31.39;ReadPosRankSum=3.542;VQSLOD=5.3017;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,19:21:54.17:676,54,0	0/0:9,0:9:24.05:0,24,245	0/0:22,0:23:23.77:0,24,432	0/0:18,0:16:38.01:0,38,360	1/1:4,31:35:87.24:1077,87,0	0/0:29,0:29:78.13:0,78,780	0/0:10,0:10:30.03:0,30,295	1/1:7,27:34:78.25:980,78,0	1/1:1,17:18:45.14:566,45,0	1/1:3,23:26:69.22:864,69,0	1/1:2,16:18:42.13:528,42,0	1/1:1,25:26:63.20:793,63,0	1/1:0,18:18:47.88:603,48,0	1/1:1,30:31:84.18:1021,84,0	0/0:22,0:22:57.13:0,57,581	1/1:1,18:19:48.15:604,48,0	1/1:2,22:24:60.19:755,60,0	1/1:4,14:18:36.11:447,36,0	1/1:1,19:20:57.16:700,57,0	1/1:0,14:14:39.12:491,39,0	1/1:2,22:24:63.17:776,63,0	1/1:3,16:19:39.12:491,39,0	1/1:2,16:18:45.14:563,45,0	1/1:2,20:22:54.17:679,54,0	1/1:0,15:15:42.13:528,42,0	1/1:2,33:35:99:1232,99,0	1/1:0,24:23:66.21:830,66,0	1/1:1,20:21:38.12:489,38,0
chr10	46504758	.	TC	T	1514.63	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.782;DP=685;FS=2.812;HRun=2;HaplotypeScore=63.0962;InbreedingCoeff=0.9955;MQ=83.60;MQ0=0;MQRankSum=-2.030;QD=32.23;ReadPosRankSum=-1.892;VQSLOD=2.8572;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,138,2046	0/0:10,0:10:30.10:0,30,447	0/0:19,0:19:49.04:0,49,696	0/0:22,0:22:51.17:0,51,738	0/0:29,0:29:84.28:0,84,1258	1/1:0,20:20:51.17:662,51,0	1/1:0,27:27:75.24:974,75,0	0/0:36,0:36:99:0,105,1571	0/0:24,0:24:69.23:0,69,1033	0/0:30,0:30:84.28:0,84,1240	0/0:12,0:12:36.11:0,36,518	0/0:19,0:19:57.19:0,57,854	0/0:22,0:22:66.22:0,66,989	0/0:25,0:25:69.23:0,69,1019	0/0:26,0:26:78.25:0,78,1148	0/0:27,0:27:81.25:0,81,1176	0/0:34,0:34:99:0,99,1464	0/0:21,0:21:63.21:0,63,943	0/0:14,0:14:42.13:0,42,610	0/0:22,0:22:66.21:0,66,970	0/0:41,0:41:99:0,114,1646	0/0:25,0:25:75.24:0,75,1104	0/0:22,0:22:60.19:0,60,868	0/0:24,0:24:72.23:0,72,1059	0/0:17,0:17:51.17:0,51,764	0/0:40,0:40:99:0,117,1729	0/0:23,0:23:69.22:0,69,1011	0/0:6,0:6:18.06:0,18,268
chr10	46506794	.	GTA	G	4509.01	PASS	AB=0.751;AC=42;AF=0.778;AN=54;BaseQRankSum=-1.725;DP=384;FS=7.324;HRun=0;HaplotypeScore=116.7390;InbreedingCoeff=0.3578;MQ=59.63;MQ0=8;MQRankSum=-1.733;QD=13.34;ReadPosRankSum=3.236;VQSLOD=4.1176;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,6:24:21.06:249,21,0	0/0:4,0:5:0:0,0,0	0/0:13,0:5:3.01:0,3,37	0/0:22,0:9:3.32:0,3,20	1/1:14,17:32:30.81:455,31,0	0/1:11,0:11:11.96:12,0,41	0/0:2,0:2:0:0,0,0	1/1:18,29:46:38.29:954,38,0	1/1:4,3:7:15.03:173,15,0	1/1:9,10:20:47.98:562,48,0	1/1:7,9:18:14.94:184,15,0	1/1:5,5:10:3.01:37,3,0	0/1:3,7:10:0:0,0,0	1/1:2,3:5:6:61,6,0	./.	1/1:4,10:14:24.07:293,24,0	1/1:3,5:7:12:131,12,0	1/1:6,3:9:8.86:88,9,0	1/1:8,0:13:14.63:70,15,0	1/1:6,0:16:5.68:28,6,0	0/1:5,0:6:0:0,0,0	1/1:4,0:4:3.01:37,3,0	0/1:3,4:7:28.30:28,0,50	1/1:3,0:3:3.01:37,3,0	1/1:6,13:19:21.05:245,21,0	1/1:9,12:21:38.38:503,38,0	1/1:6,0:20:33.81:179,34,0	1/1:3,6:9:15.05:183,15,0
chr10	46506813	.	TCACACACA	T	2843.06	PASS	AC=24;AF=0.522;AN=46;BaseQRankSum=-3.884;DP=430;FS=2.755;HRun=0;HaplotypeScore=165.3870;InbreedingCoeff=0.6676;MQ=47.21;MQ0=22;MQRankSum=-0.304;QD=13.41;ReadPosRankSum=3.385;VQSLOD=2.5200;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:14.54:0,15,406	0/0:1,0:3:0:0,0,0	./.	./.	1/1:16,11:28:8.64:199,9,0	1/1:7,6:12:3.01:60,3,0	1/1:2,5:7:3.48:78,3,0	1/1:37,5:39:4.70:151,5,0	0/0:7,0:14:17.15:0,17,184	1/1:12,8:21:36.09:703,36,0	1/1:4,12:17:2.98:76,3,0	0/0:12,0:17:11.90:0,12,244	0/0:12,0:12:9.03:0,9,224	./.	./.	1/1:4,11:15:12.04:304,12,0	1/1:7,2:8:2.99:23,3,0	1/1:6,6:12:6.49:133,6,0	0/0:11,0:10:12.04:0,12,398	0/0:16,0:20:13.80:0,14,270	./.	0/0:3,0:3:2.99:0,3,24	0/0:6,0:7:3.01:0,3,105	0/0:6,0:11:3.01:0,3,105	1/1:7,13:19:9.02:177,9,0	1/1:9,11:20:36.12:875,36,0	0/0:14,0:24:47.76:0,48,1507	1/1:4,3:7:9.03:228,9,0
chr10	46509821	.	C	CTATTTGTT	2985.48	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-8.239;DP=580;FS=13.076;HRun=0;HaplotypeScore=152.8791;InbreedingCoeff=0.9404;MQ=68.12;MQ0=0;MQRankSum=-7.149;QD=42.65;ReadPosRankSum=-0.448;VQSLOD=2.8466;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,117,2684	1/1:3,7:11:11.93:250,12,0	0/0:11,0:10:9.03:0,9,181	0/0:11,0:10:15.05:0,15,278	0/0:20,0:20:51.15:0,51,1074	1/1:3,11:15:21.07:879,21,0	1/1:7,14:25:24.08:1009,24,0	0/0:33,0:33:84.27:0,84,1816	0/0:24,0:24:51.15:0,51,1195	0/0:18,0:18:45.15:0,45,1072	0/0:20,0:20:48.15:0,48,968	0/0:22,0:22:42.11:0,42,909	0/0:19,0:19:48.16:0,48,1081	0/0:25,0:25:54.19:0,54,1362	1/1:4,15:19:24.08:1004,24,0	0/0:21,0:21:57.19:0,57,1352	0/0:32,0:32:84.24:0,84,2016	0/0:20,0:20:48.16:0,48,1142	0/0:34,0:34:75.19:0,75,1463	0/0:20,0:20:48.16:0,48,1015	0/0:15,0:15:33.11:0,33,831	0/0:14,0:14:27.07:0,27,430	0/0:22,0:22:57.13:0,57,1321	0/0:20,0:20:57.20:0,57,1440	0/0:18,0:18:51.17:0,51,1105	0/0:26,0:26:66.21:0,66,1579	0/0:21,0:21:48.13:0,48,1000	0/0:2,0:2:6.02:0,6,130
chr10	46509982	.	A	AAAAAC	6920.88	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=-11.028;DP=712;FS=1.506;HRun=0;HaplotypeScore=124.4905;InbreedingCoeff=0.8878;MQ=54.46;MQ0=8;MQRankSum=2.800;QD=28.02;ReadPosRankSum=-1.363;VQSLOD=4.6014;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:19,17:39:15.32:1145,15,0	0/0:3,0:11:18.05:0,18,207	0/0:41,0:9:6.02:0,6,107	0/1:72,0:26:13.05:13,0,78	0/0:21,0:20:39.07:0,39,615	0/0:2,0:13:33.10:0,33,383	0/0:13,0:21:18.05:0,18,207	0/0:27,0:27:24.08:0,24,426	1/1:4,15:21:45.15:1258,45,0	0/0:31,0:31:60.19:0,60,1033	0/0:23,0:23:39.13:0,39,707	1/1:11,12:27:36.12:1010,36,0	1/1:6,13:21:36.12:998,36,0	0/0:18,0:18:36.12:0,36,638	0/0:6,0:22:45.13:0,45,523	0/0:27,0:27:48.16:0,48,855	0/0:30,0:30:48.12:0,48,834	0/0:35,0:35:63.15:0,63,1061	0/0:25,0:23:33.09:0,33,539	0/0:17,0:17:30.09:0,30,511	0/0:22,0:21:36.11:0,36,610	1/1:6,7:14:18.06:506,18,0	1/1:13,16:29:42.61:1162,43,0	1/1:11,13:24:30.10:829,30,0	0/0:27,0:27:60.19:0,60,1044	0/0:22,0:22:42.10:0,42,701	0/0:22,0:22:48.16:0,48,868	0/0:9,0:9:24.08:0,24,435
chr10	46510462	.	T	TAAAACA	3726.79	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-5.297;DP=612;FS=0.567;HRun=0;HaplotypeScore=122.2169;InbreedingCoeff=0.9815;MQ=70.08;MQ0=0;MQRankSum=-7.918;QD=41.41;ReadPosRankSum=0.122;VQSLOD=2.9697;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:66.32:0,66,1493	0/0:13,0:13:23.82:0,24,414	0/0:22,0:21:31.37:0,31,522	0/0:20,0:19:35.43:0,35,520	0/0:20,0:20:45.09:0,45,744	0/0:15,0:15:39.13:0,39,790	0/0:20,0:20:39.09:0,39,721	0/0:37,0:37:87.18:0,87,1449	0/0:16,0:16:36.03:0,36,605	0/0:28,0:28:75.02:0,75,1409	0/0:14,0:14:36.06:0,36,590	0/0:10,0:10:27.02:0,27,481	0/0:18,0:18:45.10:0,45,921	0/0:30,0:30:75.12:0,75,1358	0/0:19,0:19:38.96:0,39,613	0/0:26,0:26:66.14:0,66,1243	0/0:32,0:32:69.20:0,69,1374	0/0:18,0:18:23.46:0,23,631	1/1:9,7:19:33.08:821,33,0	1/1:5,22:27:57.03:1659,57,0	1/1:10,12:23:9.03:219,9,0	0/0:21,0:21:54.17:0,54,1093	0/0:26,0:26:60.15:0,60,1181	0/0:24,0:24:60.12:0,60,1085	0/0:22,0:22:63.16:0,63,1167	0/0:23,0:23:54.08:0,54,933	1/1:5,16:21:33.09:1028,33,0	0/0:12,0:12:30.08:0,30,604
chr10	46510661	.	GTGGA	G	1483.98	PASS	AB=0.991;AC=11;AF=0.212;AN=52;BaseQRankSum=-4.772;DP=429;FS=3.614;HRun=0;HaplotypeScore=120.5022;InbreedingCoeff=-0.0519;MQ=48.54;MQ0=15;MQRankSum=2.850;QD=8.38;ReadPosRankSum=1.634;VQSLOD=2.7993;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:19:12.06:12,0,186	0/0:4,0:4:0:0,0,0	./.	./.	0/1:11,1:12:62.04:62,0,91	0/0:18,0:18:9.96:0,10,100	0/0:19,0:18:20.73:0,21,235	0/1:25,0:21:38.98:233,0,39	0/0:8,0:8:17.66:0,18,217	1/1:6,14:19:27.18:424,27,0	0/0:8,0:8:5.89:0,6,88	0/0:14,0:14:23.95:0,24,219	0/0:13,0:13:17.74:0,18,167	0/0:17,1:19:8.71:0,9,276	0/0:20,0:19:19.73:0,20,161	0/0:17,12:28:13.87:0,14,329	0/1:23,0:23:99:145,0,216	0/1:21,0:19:99:120,0,335	0/1:6,0:6:23.60:24,0,58	0/0:11,0:11:9.64:0,10,85	0/0:25,0:22:17.33:0,17,213	0/0:17,0:17:14.83:0,15,126	0/0:13,0:13:8.43:0,8,59	0/0:16,0:15:11.99:0,12,103	0/1:16,0:16:49.20:264,0,49	0/1:22,0:21:99:321,0,159	0/0:18,0:17:38.44:0,38,358	0/1:9,0:8:24.80:25,0,46
chr10	46510663	.	GGA	G	1466.95	PASS	AB=0.813;AC=19;AF=0.365;AN=52;BaseQRankSum=-5.889;DP=422;FS=0.828;HRun=0;HaplotypeScore=110.7165;InbreedingCoeff=0.5275;MQ=48.85;MQ0=14;MQRankSum=1.157;QD=7.12;ReadPosRankSum=2.466;VQSLOD=2.8971;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:18:8.96:0,9,94	0/0:2,0:4:0:0,0,0	./.	./.	1/1:11,0:13:11.62:95,12,0	0/0:7,0:20:0.94:0,1,2	0/0:16,0:20:11.69:0,12,115	0/1:15,9:21:3.92:236,0,4	0/0:6,0:7:17.93:0,18,158	1/1:19,0:19:27.33:245,27,0	0/1:4,4:8:0:0,0,0	0/0:11,0:11:20.94:0,21,177	0/0:10,0:12:11.84:0,12,114	1/1:17,2:19:8.92:64,9,0	0/0:12,0:21:20.78:0,21,162	1/1:25,1:26:8.81:82,9,0	0/1:14,7:22:6.12:59,0,6	0/1:17,0:17:38.12:136,0,38	0/1:6,0:6:26.60:27,0,35	0/0:10,0:11:8.92:0,9,84	0/0:18,0:17:11.33:0,11,126	0/0:7,0:16:9.90:0,10,75	0/0:13,0:14:10.97:0,11,100	0/0:13,0:17:6.01:0,6,64	1/1:15,0:16:29.57:269,30,0	1/1:6,15:20:39.60:391,40,0	0/0:17,0:18:30.09:0,30,267	1/1:3,6:8:3.48:34,3,0
chr10	46511150	.	TA	T	5966.14	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=9.117;DP=372;FS=0.000;HRun=3;HaplotypeScore=193.6492;InbreedingCoeff=0.8809;MQ=94.24;MQ0=0;MQRankSum=-11.079;QD=18.47;ReadPosRankSum=8.015;VQSLOD=3.8095;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,18:19:44.33:321,44,0	1/1:2,9:11:32.64:228,33,0	0/0:19,0:19:57.16:0,57,841	0/0:30,0:30:85.26:0,85,1136	1/1:0,12:12:18.29:125,18,0	1/1:1,16:17:47.31:332,47,0	1/1:1,14:15:41.47:283,41,0	1/1:1,6:7:20.76:148,21,0	1/1:0,22:22:59.12:389,59,0	1/1:1,10:11:31.82:240,32,0	1/1:1,3:4:8.88:62,9,0	1/1:2,17:19:49.97:316,50,0	1/1:1,15:16:47.29:318,47,0	1/1:0,15:15:44.02:287,44,0	1/1:5,19:24:65.13:446,65,0	1/1:2,13:15:43.96:286,44,0	1/1:1,5:6:14.54:86,15,0	1/1:0,8:8:20.95:167,21,0	1/1:0,3:3:8.88:61,9,0	1/1:2,8:10:29.45:205,29,0	1/1:2,3:5:11.94:91,12,0	1/1:1,8:9:23.87:178,24,0	1/1:1,8:9:20.83:150,21,0	1/1:3,4:7:11.84:79,12,0	1/1:4,11:15:40.95:276,41,0	1/1:1,18:19:55.03:355,55,0	1/1:2,19:21:62.36:457,62,0	1/1:0,4:4:11.83:80,12,0
chr10	46511152	.	CAAA	C	6259.92	PASS	AB=0.500;AC=51;AF=0.911;AN=56;BaseQRankSum=10.767;DP=348;FS=2.608;HRun=3;HaplotypeScore=201.7884;InbreedingCoeff=0.7236;MQ=97.04;MQ0=0;MQRankSum=-11.278;QD=20.94;ReadPosRankSum=9.501;VQSLOD=1.0304;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:0,18:18:41.57:317,42,0	1/1:0,9:9:26.91:211,27,0	0/0:19,0:19:54.16:0,54,1242	0/0:30,0:30:87.29:0,87,1927	1/1:0,10:10:12.02:132,12,0	1/1:1,16:17:47.78:369,48,0	1/1:0,14:14:41.84:327,42,0	1/1:0,6:6:17.93:140,18,0	1/1:0,22:22:59.79:469,60,0	1/1:2,10:12:20.29:228,20,0	1/1:0,3:3:5.98:47,6,0	1/1:2,17:19:50.82:397,51,0	1/1:1,15:16:47.79:368,48,0	1/1:0,15:15:44.84:350,45,0	1/1:1,19:20:53.79:418,54,0	1/1:0,13:14:34.54:304,35,0	1/1:0,5:5:14.69:103,15,0	1/1:0,8:8:20.95:166,21,0	1/1:0,3:3:8.97:70,9,0	1/1:1,8:9:26.82:203,27,0	0/1:0,3:3:1.84:38,0,2	1/1:0,8:8:20.92:163,21,0	1/1:0,8:8:17.94:140,18,0	1/1:0,4:4:5.98:47,6,0	1/1:1,11:13:30.53:262,31,0	1/1:1,18:19:56.55:432,57,0	1/1:1,19:20:59.78:465,60,0	1/1:0,4:4:11.96:92,12,0
chr10	46511156	.	GTGCCAAA	G	16740.27	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=9.879;DP=350;FS=3.570;HRun=0;HaplotypeScore=195.1229;InbreedingCoeff=0.8152;MQ=97.32;MQ0=0;MQRankSum=-10.787;QD=55.62;ReadPosRankSum=9.244;VQSLOD=3.6741;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,18:20:48.19:892,48,0	1/1:0,9:9:27.09:579,27,0	0/0:19,0:19:57.20:0,57,2136	0/0:30,0:30:63.22:0,63,2648	1/1:0,10:10:21.07:400,21,0	1/1:0,16:16:45.15:939,45,0	1/1:0,14:14:42.14:889,42,0	1/1:0,6:6:18.06:386,18,0	1/1:0,22:22:60.21:1297,60,0	1/1:3,9:12:24.23:595,24,0	1/1:0,3:3:6.02:132,6,0	1/1:0,17:17:51.18:1096,51,0	1/1:1,15:16:43.74:944,44,0	1/1:1,15:16:47.19:968,47,0	1/1:0,19:19:51.18:1092,51,0	1/1:0,13:13:33.11:705,33,0	1/1:2,5:7:16.41:307,16,0	1/1:0,8:8:23.97:455,24,0	1/1:1,3:4:7.01:190,7,0	1/1:1,8:9:23.06:494,23,0	1/1:0,3:3:9.03:150,9,0	1/1:0,8:8:21.07:420,21,0	1/1:0,8:8:21.04:385,21,0	1/1:0,4:4:6.02:132,6,0	1/1:0,11:11:33.11:692,33,0	1/1:2,18:20:57.56:1161,58,0	1/1:3,19:22:54.96:1180,55,0	1/1:0,4:4:12.04:259,12,0
chr10	46511163	.	A	ATCG	8715.99	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=9.422;DP=429;FS=4.608;HRun=0;HaplotypeScore=231.3276;InbreedingCoeff=0.9365;MQ=90.88;MQ0=0;MQRankSum=-10.694;QD=23.00;ReadPosRankSum=6.579;VQSLOD=4.4481;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:20,2:22:52.41:542,52,0	1/1:10,0:10:28.79:211,29,0	0/0:19,0:19:57.19:0,57,1024	0/0:31,0:31:68.17:0,68,1428	1/1:12,0:12:25.93:276,26,0	1/1:18,0:18:42.66:219,43,0	1/1:16,0:16:46.05:316,46,0	1/1:14,0:14:29.44:374,29,0	1/1:24,0:24:60.36:396,60,0	1/1:14,2:16:42.73:498,43,0	1/1:5,0:5:8.74:55,9,0	1/1:20,0:20:54.05:333,54,0	1/1:18,0:19:54.03:413,54,0	1/1:17,1:18:51.07:459,51,0	1/1:24,0:24:63.46:544,63,0	1/1:15,0:15:37.12:289,37,0	1/1:10,2:12:35.53:487,36,0	1/1:9,0:9:26.67:293,27,0	1/1:8,1:9:20.63:268,21,0	1/1:10,1:11:28.34:231,28,0	1/1:7,0:7:14.67:230,15,0	1/1:9,0:9:23.05:187,23,0	1/1:11,0:11:26.03:252,26,0	1/1:10,0:10:20.54:232,21,0	1/1:12,0:12:34.21:218,34,0	1/1:21,2:23:64.95:576,65,0	1/1:26,3:29:75.13:748,75,0	1/1:4,0:4:11.63:67,12,0
chr10	46511224	.	TA	T	726.59	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.486;DP=681;FS=1.359;HRun=9;HaplotypeScore=198.3620;InbreedingCoeff=0.9554;MQ=67.05;MQ0=6;MQRankSum=-4.586;QD=18.16;ReadPosRankSum=0.510;VQSLOD=1.6516;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,105,1179	1/1:2,10:12:29.95:254,30,0	0/0:39,0:28:49.20:0,49,516	0/0:43,0:27:21.91:0,22,347	0/0:28,0:28:75.17:0,75,840	0/0:19,0:18:30.09:0,30,345	0/0:9,0:9:18.05:0,18,207	0/0:27,0:26:60.16:0,60,675	0/0:22,0:22:48.55:0,49,537	0/0:32,0:32:87.19:0,87,973	0/0:25,0:25:72.20:0,72,821	0/0:26,0:26:71.92:0,72,744	0/0:20,0:20:54.04:0,54,581	0/0:25,0:25:66.18:0,66,750	1/1:5,23:28:68:594,68,0	0/0:21,0:21:60.18:0,60,692	0/0:27,0:27:75.20:0,75,852	0/0:14,0:14:39.07:0,39,432	0/0:19,0:19:42.10:0,42,471	0/0:29,0:29:63.57:0,64,698	0/0:10,0:10:8.76:0,9,104	0/0:23,0:23:59.98:0,60,635	0/0:23,0:23:52.35:0,52,575	0/0:16,0:16:32.64:0,33,341	0/0:21,0:21:60.12:0,60,666	0/0:33,0:33:90.20:0,90,999	0/0:43,0:43:99:0,110,1226	0/0:6,0:6:15.04:0,15,173
chr10	46511243	.	ACAAAAAAC	A	1965.22	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=-0.757;DP=698;FS=1.905;HRun=0;HaplotypeScore=255.6728;InbreedingCoeff=-0.0157;MQ=54.23;MQ0=6;MQRankSum=-1.045;QD=7.12;ReadPosRankSum=-7.660;VQSLOD=0.3824;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:40,0:40:99:183,0,1713	0/1:14,0:14:32.75:33,0,540	0/0:41,0:20:22.16:0,22,228	0/0:38,0:18:9.59:0,10,204	0/0:34,0:34:85.86:0,86,2227	1/1:1,17:18:23.64:657,24,0	1/1:0,10:10:12.04:321,12,0	0/0:21,0:20:41.54:0,42,991	0/1:23,0:23:73.59:74,0,756	0/0:33,0:33:90.09:0,90,2678	0/0:28,0:28:70.51:0,71,2014	0/1:28,0:28:99:138,0,1122	0/1:20,0:20:40.56:41,0,677	0/0:23,0:23:58.25:0,58,1379	0/1:31,0:31:99:116,0,1094	0/0:25,0:25:73.64:0,74,2276	0/0:28,0:28:76.01:0,76,2273	0/0:17,0:17:42.02:0,42,1137	0/1:21,0:21:46.44:46,0,338	0/0:30,0:30:29.17:0,29,1087	0/1:12,0:12:23.59:24,0,126	0/1:21,0:21:99:128,0,807	0/1:19,0:19:99:311,0,382	0/1:19,0:19:62.67:63,0,368	0/0:22,0:22:66.08:0,66,1872	0/0:31,0:31:75.71:0,76,1983	0/0:44,0:44:64.64:0,65,2087	0/0:6,0:6:18.06:0,18,605
chr10	46511244	.	C	CA	948.02	PASS	AB=0.954;AC=12;AF=0.214;AN=56;BaseQRankSum=11.980;DP=696;FS=8.934;HRun=6;HaplotypeScore=175.0960;InbreedingCoeff=-0.2623;MQ=53.42;MQ0=6;MQRankSum=-9.801;QD=2.89;ReadPosRankSum=4.835;VQSLOD=-0.4603;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:89.74:0,90,503	0/1:14,0:14:27.20:72,0,27	0/1:39,1:18:3.64:4,0,94	0/1:36,1:19:37.85:38,0,42	0/0:34,0:34:84.45:0,84,415	0/0:18,0:17:16.26:0,16,48	0/0:10,0:10:8.95:0,9,32	0/0:21,0:20:45.63:0,46,200	0/1:23,0:23:75.80:125,0,76	0/0:33,0:33:79.49:0,79,345	0/0:28,0:28:69.96:0,70,331	0/1:28,0:28:89.67:163,0,90	0/1:21,0:21:46.65:140,0,47	0/0:22,0:22:51.76:0,52,239	0/1:30,1:31:99:136,0,117	0/0:26,0:26:64.98:0,65,304	0/0:28,0:28:68.40:0,68,365	0/0:18,0:18:39.99:0,40,212	0/0:21,0:21:14.54:0,15,158	0/1:23,7:30:49.78:50,0,210	0/0:12,0:12:23.10:0,23,132	0/1:21,0:21:14.26:137,0,14	0/1:19,0:19:53.43:53,0,104	0/1:19,0:19:22.40:22,0,68	0/0:22,0:22:55.37:0,55,253	0/0:30,0:30:70.47:0,70,312	0/1:30,13:43:99:157,0,254	0/0:6,0:6:16.98:0,17,82
chr10	46511247	.	A	AC	3484.27	PASS	AB=1.000;AC=20;AF=0.357;AN=56;BaseQRankSum=12.148;DP=689;FS=3.867;HRun=0;HaplotypeScore=166.4187;InbreedingCoeff=0.8443;MQ=53.61;MQ0=5;MQRankSum=-5.537;QD=13.72;ReadPosRankSum=0.186;VQSLOD=4.2661;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:39,0:39:39.58:231,40,0	1/1:6,9:15:41.62:316,42,0	0/0:39,0:17:38.79:0,39,402	0/0:37,0:18:24.29:0,24,335	0/0:32,0:32:96.24:0,96,1179	0/0:18,0:17:16.26:0,16,45	0/0:10,0:10:7.36:0,7,20	0/0:22,0:21:60.17:0,60,714	1/1:12,9:24:43.68:408,44,0	0/0:33,0:33:95.85:0,96,1138	0/0:26,0:26:78.24:0,78,976	1/1:12,16:28:67.85:573,68,0	1/1:7,12:19:45.40:427,45,0	0/0:21,0:21:60.13:0,60,729	1/1:14,16:30:55.44:519,55,0	0/0:26,0:26:78.14:0,78,931	0/0:28,0:28:81.16:0,81,976	0/0:17,0:17:48.09:0,48,570	0/0:21,0:21:13.83:0,14,337	0/1:31,0:31:6.09:6,0,351	0/1:12,0:12:12.32:12,0,128	1/1:8,12:20:57.68:498,58,0	1/1:13,5:19:46.40:348,46,0	1/1:13,4:17:17.46:145,17,0	0/0:23,0:23:66.14:0,66,804	0/0:32,0:32:90.26:0,90,1081	0/0:42,0:42:21.06:0,21,512	0/0:7,0:7:21.06:0,21,255
chr10	46511251	.	C	CAAA	7731.57	PASS	AB=0.938;AC=23;AF=0.411;AN=56;BaseQRankSum=9.022;DP=665;FS=7.790;HRun=6;HaplotypeScore=168.3544;InbreedingCoeff=0.4934;MQ=52.51;MQ0=5;MQRankSum=-6.670;QD=21.84;ReadPosRankSum=-1.122;VQSLOD=1.0539;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:39,0:39:47.31:47,0,83	1/1:6,8:15:35.09:626,35,0	0/1:32,0:15:15.91:16,0,171	0/0:33,0:16:25.27:0,25,133	0/0:31,0:31:88.79:0,89,677	0/0:18,0:17:23.59:0,24,153	0/0:11,0:11:11.24:0,11,66	0/0:22,0:21:51.84:0,52,295	1/1:16,9:25:47.67:856,48,0	0/0:33,0:33:34.61:0,35,558	0/0:25,0:25:73.46:0,73,538	1/1:12,16:28:63.92:1099,64,0	1/1:8,11:19:51.75:827,52,0	0/0:19,0:19:54.82:0,55,350	1/1:14,16:30:58.73:1063,59,0	0/0:25,0:25:72.59:0,73,569	0/0:26,0:26:69.53:0,70,586	0/0:15,0:15:41.88:0,42,350	0/1:22,0:22:47.81:284,0,48	0/1:22,0:29:27.12:570,0,27	0/1:12,0:12:48.62:55,0,49	1/1:6,12:18:50.95:793,51,0	1/1:12,5:17:28.17:423,28,0	1/1:15,4:19:19.98:273,20,0	0/0:21,0:21:56.53:0,57,451	0/0:32,0:32:52.52:0,53,490	0/1:28,0:41:99:795,0,104	0/1:8,0:8:5.71:6,0,126
chr10	46511256	.	C	CAAAC	7961.92	PASS	AB=1.000;AC=25;AF=0.446;AN=56;BaseQRankSum=5.854;DP=677;FS=4.327;HRun=0;HaplotypeScore=182.0191;InbreedingCoeff=0.8288;MQ=50.64;MQ0=2;MQRankSum=-10.546;QD=24.88;ReadPosRankSum=-2.245;VQSLOD=4.0353;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:42.16:0,42,339	1/1:14,0:14:36.11:678,36,0	0/1:26,0:12:11.86:12,0,83	0/0:25,0:14:19.78:0,20,136	0/0:32,0:32:78.10:0,78,795	0/0:19,0:18:23.74:0,24,209	0/0:12,0:12:9.47:0,9,79	0/0:23,0:22:26.98:0,27,260	1/1:26,0:26:51.51:947,52,0	0/0:33,0:33:30.84:0,31,703	0/0:28,0:28:60.11:0,60,612	1/1:30,0:30:59.90:1232,60,0	1/1:20,0:20:44.26:873,44,0	0/0:19,0:19:33.06:0,33,335	1/1:30,0:30:59.38:1156,59,0	0/0:26,0:26:72.11:0,72,723	0/0:29,0:29:64.42:0,64,667	0/0:16,0:16:42.06:0,42,444	1/1:25,0:24:14.43:185,14,0	1/1:30,0:30:18.38:446,18,0	0/1:15,0:15:1.43:17,0,1	1/1:20,0:20:45.13:891,45,0	1/1:18,0:18:20.15:432,20,0	1/1:13,4:18:19.58:281,20,0	0/0:22,0:22:54.24:0,54,574	0/0:34,0:34:17.72:0,18,551	1/1:40,0:40:27.89:808,28,0	0/1:8,0:8:2.68:3,0,184
chr10	46512161	.	A	ATG	2079.88	PASS	AB=0.804;AC=11;AF=0.196;AN=56;BaseQRankSum=1.946;DP=733;FS=42.163;HRun=0;HaplotypeScore=118.4100;InbreedingCoeff=-0.0752;MQ=42.38;MQ0=0;MQRankSum=-7.597;QD=6.62;ReadPosRankSum=5.458;VQSLOD=1.4723;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,8:40:18.53:0,19,239	0/0:22,0:23:12.04:0,12,157	0/0:12,0:6:15.92:0,16,186	0/0:13,0:11:32.30:0,32,420	0/0:13,9:22:0.40:0,0,0	0/0:12,5:17:4.37:0,4,47	0/0:27,4:31:15.51:0,16,199	0/1:27,7:34:99:468,0,346	0/0:29,5:34:6.88:0,7,72	0/1:26,15:40:99:597,0,257	0/0:20,5:25:6.60:0,7,56	0/1:31,10:41:12.79:13,0,78	0/1:14,9:23:1.89:43,0,2	0/0:29,6:35:8.58:0,9,107	0/0:40,0:40:5.90:0,6,74	0/0:23,8:31:11.47:0,11,143	0/0:22,0:22:24.24:0,24,239	0/1:11,1:12:39.70:40,0,160	0/1:16,3:16:99:200,0,103	0/0:15,8:23:1.55:0,2,5	0/0:5,0:5:5.89:0,6,65	0/1:34,9:43:0.40:0,0,0	0/0:19,6:25:7.57:0,8,88	0/0:19,1:20:7.25:0,7,75	0/1:27,6:33:0.41:0,0,1	0/1:21,15:36:99:706,0,260	0/1:13,3:16:37.80:38,0,104	0/1:10,4:14:99:107,0,125
chr10	46513547	.	T	TAA	4385.09	PASS	AC=30;AF=0.556;AN=54;BaseQRankSum=-1.670;DP=384;FS=0.000;HRun=13;HaplotypeScore=53.6536;InbreedingCoeff=0.8883;MQ=54.22;MQ0=3;MQRankSum=-3.063;QD=18.05;ReadPosRankSum=-2.336;VQSLOD=3.0278;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:16.98:0,17,253	1/1:1,0:2:3:29,3,0	0/0:4,0:1:2.99:0,3,24	0/0:8,0:2:6:0,6,51	1/1:8,6:12:15:183,15,0	1/1:6,20:31:47.13:588,47,0	1/1:2,3:8:11.01:99,11,0	1/1:9,19:30:61.50:636,62,0	0/0:9,0:9:20.84:0,21,175	1/1:5,12:17:33.05:410,33,0	1/1:4,12:18:28.02:241,28,0	0/0:4,0:4:11.99:0,12,102	0/0:11,0:11:8.81:0,9,79	1/1:6,9:15:23.20:251,23,0	1/1:1,1:10:12.02:126,12,0	1/1:0,7:9:14.54:172,15,0	1/1:10,15:26:35.60:443,36,0	1/1:4,11:19:29.53:331,30,0	0/0:22,0:23:26.61:0,27,311	0/0:15,0:15:29.93:0,30,259	0/0:9,0:10:29.74:0,30,249	./.	0/0:6,0:7:8.67:0,9,65	0/0:6,0:6:11.91:0,12,105	1/1:6,9:14:18.02:224,18,0	1/1:6,11:18:35.28:369,35,0	0/0:13,0:15:41.46:0,41,334	1/1:1,7:8:21.07:285,21,0
chr10	46513825	.	GTTTATA	G	8623.22	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=17.548;DP=536;FS=0.709;HRun=0;HaplotypeScore=195.6595;InbreedingCoeff=0.9650;MQ=83.67;MQ0=0;MQRankSum=-17.068;QD=46.87;ReadPosRankSum=5.122;VQSLOD=4.8622;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:61,0:61:99:0,181,6741	1/1:0,4:4:12.04:217,12,0	0/0:21,0:21:36.07:0,36,2003	0/0:18,0:18:51.18:0,51,1798	1/1:0,10:9:13.81:258,14,0	1/1:1,12:13:39:669,39,0	1/1:1,5:6:15.05:264,15,0	1/1:1,9:10:27.56:493,28,0	0/0:29,0:29:87.30:0,87,3142	1/1:3,13:15:43:714,43,0	1/1:0,5:3:3.01:54,3,0	0/0:28,0:28:81.25:0,81,2864	0/0:27,0:27:81.28:0,81,3019	1/1:0,27:27:78.27:1404,78,0	1/1:3,15:18:47.56:823,48,0	1/1:1,12:13:39.12:683,39,0	1/1:2,16:18:42.44:760,42,0	1/1:0,7:7:21.07:388,21,0	0/0:15,0:15:42.14:0,42,1591	0/0:18,0:18:54.19:0,54,2011	0/0:49,0:49:99:0,148,5520	0/0:18,0:18:54.19:0,54,2009	0/0:10,0:10:30.10:0,30,1102	0/0:29,0:29:87.30:0,87,3204	1/1:1,13:14:39.12:677,39,0	1/1:1,16:17:50.66:885,51,0	0/0:29,0:29:87.30:0,87,3258	1/1:0,6:6:18.06:334,18,0
chr10	46513832	.	GGAGCCCCGC	G	11757.04	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=17.847;DP=549;FS=1.539;HRun=0;HaplotypeScore=220.8613;InbreedingCoeff=0.9672;MQ=88.16;MQ0=0;MQRankSum=-17.814;QD=67.57;ReadPosRankSum=6.935;VQSLOD=4.6326;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:72,0:72:99:0,214,10386	1/1:0,4:4:12.04:301,12,0	0/0:25,0:25:75.25:0,75,2553	0/0:20,0:21:56.35:0,56,2260	1/1:3,10:12:15.05:363,15,0	1/1:0,12:12:36.12:904,36,0	1/1:0,5:5:15.05:369,15,0	1/1:0,9:9:27.09:681,27,0	0/0:29,0:29:87.26:0,87,3925	1/1:0,13:12:36.12:913,36,0	1/1:0,5:3:3.48:76,3,0	0/0:27,0:27:78.25:0,78,3686	0/0:26,0:26:78.27:0,78,3529	1/1:0,27:27:78.27:1948,78,0	1/1:1,15:16:45.15:1113,45,0	1/1:0,12:12:36.12:908,36,0	1/1:0,16:16:42.14:1053,42,0	1/1:0,7:7:21.07:535,21,0	0/0:22,0:22:63.21:0,63,2991	0/0:16,0:16:48.16:0,48,2398	0/0:50,0:50:99:0,148,6931	0/0:18,0:18:54.19:0,54,2570	0/0:10,0:10:27.09:0,27,1281	0/0:30,0:30:90.31:0,90,4247	1/1:0,13:13:39.09:922,39,0	1/1:0,16:16:48.16:1211,48,0	0/0:29,0:29:87.30:0,87,4238	1/1:0,6:6:18.06:460,18,0
chr10	46515257	.	A	AT	1587.47	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-7.104;DP=611;FS=1.321;HRun=1;HaplotypeScore=61.7920;InbreedingCoeff=0.9897;MQ=65.14;MQ0=1;MQRankSum=-1.853;QD=37.80;ReadPosRankSum=1.508;VQSLOD=4.1378;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,114,1415	1/1:0,10:10:27.09:405,27,0	0/0:5,0:5:15.04:0,15,185	0/0:13,0:13:38.97:0,39,413	0/0:16,0:16:39.13:0,39,506	0/0:22,0:21:66.20:0,66,839	0/0:19,0:19:57.18:0,57,738	0/0:37,0:37:99:0,111,1406	0/0:18,0:18:51.17:0,51,660	0/0:14,0:14:42.14:0,42,545	0/0:16,0:16:48.16:0,48,621	0/0:31,0:31:93.29:0,93,1192	0/0:22,0:22:63.20:0,63,818	0/0:30,0:30:90.29:0,90,1169	1/1:0,32:32:87.29:1304,87,0	0/0:28,0:28:81.26:0,81,1052	0/0:26,0:26:69.18:0,69,862	0/0:22,0:22:66.21:0,66,856	0/0:27,0:27:81.23:0,81,1009	0/0:20,0:20:51.17:0,51,662	0/0:31,0:30:87.27:0,87,1115	0/0:8,0:8:24.08:0,24,312	0/0:16,0:16:45.15:0,45,584	0/0:22,0:23:57.13:0,57,707	0/0:15,0:15:42.14:0,42,545	0/0:26,0:26:75.23:0,75,950	0/0:35,0:33:96.27:0,96,1225	0/0:11,0:11:27.09:0,27,351
chr10	46515620	.	TTCATGTC	T	20030.80	PASS	AB=1.000;AC=53;AF=0.946;AN=56;BaseQRankSum=0.987;DP=568;FS=10.674;HRun=0;HaplotypeScore=155.5941;InbreedingCoeff=0.5343;MQ=65.98;MQ0=1;MQRankSum=-6.491;QD=36.42;ReadPosRankSum=3.951;VQSLOD=4.1959;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,35:42:60.21:1414,60,0	1/1:0,5:5:15.05:374,15,0	0/1:19,0:19:24.78:25,0,428	0/0:18,0:18:15.39:0,15,452	1/1:1,17:18:5.68:40,6,0	1/1:2,19:21:48.16:1160,48,0	1/1:4,27:31:42.14:943,42,0	1/1:11,14:25:42.12:901,42,0	1/1:2,20:22:42.14:1005,42,0	1/1:5,18:23:57.18:1274,57,0	1/1:3,9:12:15.01:275,15,0	1/1:3,18:22:36.08:843,36,0	1/1:1,23:24:45.15:1047,45,0	1/1:1,22:23:54.19:1324,54,0	1/1:2,25:27:54.19:1309,54,0	1/1:4,11:15:33.11:781,33,0	1/1:7,19:26:21.07:501,21,0	1/1:6,17:23:36.12:846,36,0	1/1:2,13:15:39.11:807,39,0	1/1:0,11:11:27.01:529,27,0	1/1:5,26:31:14.94:355,15,0	1/1:0,11:11:15.05:322,15,0	1/1:1,7:8:11.80:244,12,0	1/1:6,23:28:17.01:426,17,0	1/1:5,11:16:15.05:374,15,0	1/1:3,25:28:75.24:1733,75,0	1/1:4,14:18:33.11:805,33,0	1/1:0,5:5:15.05:374,15,0
chr10	46517873	.	A	AC	11577.07	PASS	AB=0.818;AC=27;AF=0.482;AN=56;BaseQRankSum=11.486;DP=822;FS=15.520;HRun=0;HaplotypeScore=118.5142;InbreedingCoeff=0.7538;MQ=56.85;MQ0=25;MQRankSum=-0.441;QD=29.02;ReadPosRankSum=2.947;VQSLOD=3.7278;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,140,1859	0/1:7,0:6:38.28:40,0,38	0/0:58,0:13:16.12:0,16,209	0/0:53,0:12:4.43:0,4,200	1/1:0,28:28:80.80:1033,81,0	1/1:11,4:15:5.01:211,5,0	0/1:17,13:30:10.29:384,0,10	1/1:2,28:27:75.05:870,75,0	0/0:16,0:16:48.15:0,48,653	1/1:6,25:27:70.50:1046,70,0	1/1:0,27:27:72.06:944,72,0	0/0:27,0:27:72.66:0,73,934	0/0:23,0:23:66.20:0,66,884	1/1:0,25:26:66.19:889,66,0	0/1:21,10:31:99:332,0,207	1/1:1,23:24:57.18:789,57,0	1/1:4,41:45:78.34:1480,78,0	1/1:1,24:25:69.09:917,69,0	0/0:24,0:23:66.15:0,66,834	0/0:25,0:23:69.18:0,69,921	0/0:36,0:35:99:0,99,1348	0/0:27,0:27:74.96:0,75,937	0/0:19,0:17:51.12:0,51,671	0/0:31,0:31:93.17:0,93,1213	1/1:2,35:37:89.44:1133,89,0	1/1:2,26:27:78.13:1020,78,0	0/0:35,0:35:99:0,105,1417	1/1:1,13:14:36.11:489,36,0
chr10	46518396	.	G	GAAAA	6527.13	PASS	AB=1.000;AC=27;AF=0.482;AN=56;BaseQRankSum=11.256;DP=619;FS=14.916;HRun=10;HaplotypeScore=126.0338;InbreedingCoeff=0.7127;MQ=71.48;MQ0=2;MQRankSum=-11.583;QD=23.31;ReadPosRankSum=-0.817;VQSLOD=1.4730;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:35:89.65:0,90,1275	1/1:12,0:12:27.09:459,27,0	0/0:19,0:17:16.92:0,17,140	0/0:19,0:19:8.71:0,9,188	1/1:37,0:36:41.89:900,42,0	1/1:6,10:18:29.95:587,30,0	1/1:1,17:19:36.12:772,36,0	0/1:24,0:24:99:296,0,105	0/0:18,0:18:39.01:0,39,538	0/1:25,0:25:34.17:531,0,34	1/1:26,0:26:42.58:584,43,0	0/0:24,0:24:57.01:0,57,714	0/0:21,0:21:51.07:0,51,684	1/1:12,0:12:3.01:45,3,0	1/1:35,0:34:63.22:1156,63,0	1/1:9,0:9:3.01:44,3,0	1/1:18,0:17:15.94:223,16,0	1/1:9,0:9:9.03:128,9,0	0/0:24,0:24:56.98:0,57,684	0/0:24,0:27:50.01:0,50,629	0/0:39,0:39:99:0,111,1506	0/0:34,0:34:87.16:0,87,1172	0/0:18,0:18:45.06:0,45,593	0/0:21,0:22:61.32:0,61,813	1/1:12,0:11:24.08:359,24,0	0/1:19,0:19:50.98:270,0,51	0/0:36,0:37:94.49:0,94,1250	1/1:4,0:4:12.04:174,12,0
chr10	46518402	.	A	ACAAAAC	12025.24	PASS	AB=1.000;AC=28;AF=0.500;AN=56;BaseQRankSum=-0.846;DP=664;FS=1.447;HRun=0;HaplotypeScore=133.4354;InbreedingCoeff=0.7856;MQ=65.39;MQ0=2;MQRankSum=-9.415;QD=38.67;ReadPosRankSum=-0.511;VQSLOD=4.6857;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,105,2279	1/1:0,0:13:27.05:293,27,0	0/0:19,0:16:38.66:0,39,393	0/0:21,0:19:12.27:0,12,550	1/1:1,32:39:78.11:2238,78,0	0/1:15,0:14:19.52:69,0,20	0/1:23,0:23:38.83:39,0,103	1/1:0,17:32:93.09:1809,93,0	0/0:20,0:20:57.10:0,57,1077	1/1:3,22:30:81.22:2076,81,0	1/1:0,25:31:66.13:1621,66,0	0/0:24,0:24:66.17:0,66,1294	0/0:23,0:23:69.18:0,69,1355	1/1:0,6:10:3.01:106,3,0	1/1:1,0:35:39.31:617,39,0	1/1:0,9:9:3.01:106,3,0	1/1:0,11:14:9.03:317,9,0	1/1:0,8:11:9.03:319,9,0	0/0:31,0:31:87.18:0,87,1377	0/0:27,0:27:71.88:0,72,1430	0/0:39,0:39:99:0,117,2557	0/0:35,0:35:99:0,102,2171	0/0:17,0:17:51.16:0,51,1156	0/0:24,0:24:69.21:0,69,1531	1/1:0,13:18:24.08:838,24,0	1/1:0,14:20:57.01:1154,57,0	0/0:35,0:35:99:0,105,2156	1/1:0,4:7:12.04:424,12,0
chr10	46518567	.	G	GCAAAGT	23663.23	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-6.113;DP=648;FS=44.557;HRun=0;HaplotypeScore=126.8550;InbreedingCoeff=0.9612;MQ=78.66;MQ0=0;MQRankSum=-19.671;QD=77.84;ReadPosRankSum=-4.263;VQSLOD=2.3837;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,120,2740	1/1:3,0:3:3.01:41,3,0	0/0:26,0:26:69.24:0,69,1448	0/0:18,0:18:31.35:0,31,692	1/1:9,18:29:57.20:1726,57,0	1/1:3,16:18:54.19:1728,54,0	1/1:6,18:24:63.22:2059,63,0	1/1:23,15:38:99:3224,105,0	0/0:23,0:23:66.20:0,66,1469	1/1:7,10:17:45.15:1456,45,0	1/1:2,8:11:30.10:928,30,0	0/0:31,0:31:87.27:0,87,1913	0/0:26,0:26:69.24:0,69,1590	1/1:7,22:31:63.22:2144,63,0	1/1:14,24:39:24.13:2739,24,0	1/1:1,14:15:39.13:1363,39,0	1/1:6,14:21:51.18:1691,51,0	1/1:6,7:13:30.10:1050,30,0	0/0:18,0:18:54.18:0,54,1174	0/0:26,0:26:69.24:0,69,1588	0/0:30,0:30:75.26:0,75,1722	0/0:24,0:24:66.23:0,66,1512	0/0:19,0:19:57.18:0,57,1224	0/0:29,0:29:84.25:0,84,1887	1/1:8,10:18:48.16:1510,48,0	1/1:10,12:22:60.21:1935,60,0	0/0:33,0:33:93.32:0,93,2143	1/1:3,0:3:5.98:68,6,0
chr10	46519754	.	T	TA	622.48	PASS	AC=24;AF=0.857;AN=28;BaseQRankSum=0.962;DP=54;FS=0.000;HRun=4;HaplotypeScore=34.2154;InbreedingCoeff=0.3881;MQ=55.06;MQ0=2;MQRankSum=-2.389;QD=15.56;ReadPosRankSum=2.141;VQSLOD=2.0926;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	1/1:0,2:2:2.96:19,3,0	0/0:7,0:2:3.01:0,3,30	0/0:7,0:1:2.99:0,3,23	./.	1/1:0,4:4:10.85:60,11,0	1/1:0,1:1:2.90:16,3,0	./.	1/1:0,4:4:11.73:71,12,0	./.	./.	1/1:0,2:2:5.87:35,6,0	1/1:0,5:5:14.59:86,15,0	./.	1/1:0,6:6:17.48:105,17,0	./.	./.	./.	1/1:0,1:1:3.01:30,3,0	1/1:0,4:4:11.61:64,12,0	./.	1/1:0,2:2:5.85:34,6,0	1/1:0,2:2:2.90:16,3,0	./.	./.	./.	1/1:0,7:7:20.96:182,21,0	./.
chr10	46519767	.	CGCG	C	420.53	PASS	AB=0.836;AC=29;AF=0.630;AN=46;BaseQRankSum=-0.900;DP=265;FS=30.776;HRun=0;HaplotypeScore=59.7877;InbreedingCoeff=-0.0957;MQ=36.76;MQ0=8;MQRankSum=-3.883;QD=2.12;ReadPosRankSum=2.279;VQSLOD=0.0577;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:10,1:11:9.91:12,0,10	1/1:2,1:3:0.47:1,0,0	./.	0/0:10,0:1:1.82:0,2,5	./.	1/1:5,4:9:0.47:2,0,0	0/1:8,3:10:0.01:0,0,0	1/1:1,1:2:5.38:62,5,0	1/1:13,3:16:0.10:14,0,0	0/1:11,0:11:25.98:26,0,84	./.	1/1:15,0:16:2.03:5,2,0	0/1:13,0:17:16.93:44,0,17	0/1:7,0:10:0.25:0,0,1	1/1:10,9:19:8.52:46,9,0	0/1:6,3:7:3.14:24,0,3	0/1:11,1:11:17.36:17,0,25	0/1:6,0:6:8.86:34,0,9	1/1:1,0:1:1.82:5,2,0	./.	0/1:8,3:12:0:0,0,0	0/0:11,0:11:0.76:0,1,1	./.	1/1:12,0:12:2.50:9,2,0	0/0:7,1:7:0.47:0,0,1	0/1:7,0:10:16.77:168,0,17	1/1:7,0:7:2.75:10,3,0	0/1:2,0:3:30.65:46,0,31
chr10	46526337	.	T	TC	11364.58	PASS	AB=0.870;AC=55;AF=0.982;AN=56;BaseQRankSum=3.104;DP=676;FS=4.340;HRun=1;HaplotypeScore=113.5359;InbreedingCoeff=-0.0212;MQ=81.11;MQ0=0;MQRankSum=-2.364;QD=16.81;ReadPosRankSum=5.084;VQSLOD=5.4107;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:35,1:36:99:731,104,0	1/1:12,0:12:35.52:238,36,0	1/1:15,0:15:6.29:191,6,0	0/1:17,3:19:13.28:246,0,13	1/1:27,0:27:58.94:498,59,0	1/1:25,0:25:61.97:399,62,0	1/1:28,0:28:44:390,44,0	1/1:36,0:36:72.71:533,73,0	1/1:20,0:20:50.18:319,50,0	1/1:32,0:32:89.86:531,90,0	1/1:24,0:24:61.98:409,62,0	1/1:34,0:34:84.89:579,85,0	1/1:33,0:33:70.52:571,71,0	1/1:25,0:25:64.99:427,65,0	1/1:30,0:29:51.74:431,52,0	1/1:22,0:22:61.79:384,62,0	1/1:17,0:17:35.73:270,36,0	1/1:23,0:23:59.30:409,59,0	1/1:22,0:22:62.54:379,63,0	1/1:13,0:13:28.48:195,28,0	1/1:38,0:38:99:681,104,0	1/1:25,0:25:63.33:422,63,0	1/1:18,0:18:53.15:340,53,0	1/1:28,0:28:52.12:461,52,0	1/1:22,0:22:59.18:404,59,0	1/1:22,0:22:64.61:394,65,0	1/1:23,0:23:64.99:417,65,0	1/1:6,0:6:17.76:117,18,0
chr10	46526410	.	AACACAC	A	662.47	PASS	AB=0.967;AC=24;AF=0.667;AN=36;BaseQRankSum=3.506;DP=520;FS=6.100;HRun=0;HaplotypeScore=126.1086;InbreedingCoeff=0.3037;MQ=77.39;MQ0=15;MQRankSum=-2.997;QD=2.62;ReadPosRankSum=-0.881;VQSLOD=1.9916;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:32,0:32:11.02:11,0,14	0/0:9,0:9:8.96:0,9,112	./.	./.	./.	0/0:21,0:20:5.78:0,6,40	1/1:25,0:25:2.89:19,3,0	./.	1/1:11,2:14:9.01:106,9,0	1/1:15,0:15:3.01:42,3,0	1/1:7,0:7:3.01:42,3,0	1/1:17,2:19:5.85:34,6,0	0/1:13,1:14:13.95:54,0,14	1/1:17,0:17:6.02:84,6,0	0/0:9,0:9:2.99:0,3,24	1/1:19,0:19:15.05:209,15,0	1/1:23,0:22:5.86:83,6,0	1/1:19,0:19:3.01:33,3,0	1/1:17,0:17:2.96:20,3,0	./.	1/1:32,0:32:5.99:51,6,0	./.	0/0:14,0:15:2.74:0,3,12	0/0:25,0:25:2.56:0,3,23	./.	./.	./.	./.
chr10	46526447	.	ACACACACACACACACACACC	A	2753.53	PASS	AB=0.975;AC=20;AF=0.357;AN=56;BaseQRankSum=2.232;DP=564;FS=2.626;HRun=0;HaplotypeScore=230.1231;InbreedingCoeff=-0.2407;MQ=53.20;MQ0=30;MQRankSum=0.891;QD=8.03;ReadPosRankSum=-2.106;VQSLOD=2.5892;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:30:66.84:0,67,1930	0/1:8,0:8:0.89:1,0,953	0/0:11,0:5:15.03:0,15,167	0/0:19,0:10:9.45:0,9,166	0/1:18,0:17:32.33:86,0,32	0/1:25,0:23:65.39:65,0,1272	0/0:29,0:27:22.30:0,22,530	0/1:25,0:21:94.72:245,0,95	0/0:29,0:27:65.90:0,66,2314	1/1:21,0:21:21.85:423,22,0	1/1:13,0:12:4.25:112,4,0	0/0:24,0:24:48.11:0,48,1544	0/0:16,0:14:36.01:0,36,1496	0/1:26,0:25:11.48:226,0,11	0/1:15,0:15:35.91:36,0,861	0/1:20,1:21:64.16:771,0,64	0/1:31,1:31:43.38:279,0,43	0/1:13,12:25:73.58:140,0,74	0/1:10,0:8:31.82:32,0,376	0/1:9,0:9:8.59:9,0,213	0/1:41,0:39:73.75:74,0,1275	0/0:12,0:12:24.02:0,24,725	0/0:15,0:15:29.54:0,30,898	0/0:32,0:31:69.16:0,69,2468	0/1:18,0:17:29.38:210,0,29	0/1:18,0:17:96.49:117,0,96	0/1:13,0:13:39.35:39,0,378	0/1:5,0:4:12.96:55,0,13
chr10	46526449	.	ACACACACACACACACACC	A	3906.31	PASS	AB=0.923;AC=25;AF=0.446;AN=56;BaseQRankSum=1.597;DP=551;FS=1.965;HRun=0;HaplotypeScore=207.2849;InbreedingCoeff=0.2177;MQ=53.49;MQ0=29;MQRankSum=0.658;QD=11.66;ReadPosRankSum=-2.034;VQSLOD=2.6087;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:27:60.48:0,60,1533	0/1:8,0:8:0.89:1,0,797	0/0:12,0:7:18.03:0,18,191	0/0:16,0:10:9.45:0,9,166	1/1:19,0:18:17.74:171,18,0	0/1:25,0:23:68.31:68,0,911	0/0:30,0:28:19.27:0,19,361	1/1:23,0:19:3.02:280,3,0	0/0:29,0:27:65.90:0,66,1862	1/1:1,19:20:47.72:498,48,0	0/1:3,10:12:5.32:148,0,5	0/0:24,0:24:48.09:0,48,1252	0/0:16,0:14:36.03:0,36,1234	1/1:4,17:20:6.02:308,6,0	0/1:15,0:15:39.11:39,0,636	1/1:16,4:20:41.96:1063,42,0	0/1:9,22:30:9.23:283,0,9	0/1:23,0:23:16.51:165,0,17	0/1:9,0:7:32.30:32,0,297	0/1:9,0:9:28.10:28,0,109	0/1:42,0:40:99:103,0,842	0/0:12,0:12:24.02:0,24,603	0/0:15,0:15:26.54:0,27,749	0/0:31,0:30:69.14:0,69,1958	1/1:18,0:17:41.58:329,42,0	0/1:20,0:19:5.58:251,0,6	0/1:13,0:13:86.57:87,0,199	1/1:6,0:5:8.34:53,8,0
chr10	46526457	.	ACACACACACC	A	4422.70	PASS	AB=1.000;AC=35;AF=0.625;AN=56;BaseQRankSum=1.809;DP=514;FS=15.854;HRun=0;HaplotypeScore=136.3275;InbreedingCoeff=0.5634;MQ=56.42;MQ0=23;MQRankSum=0.569;QD=12.46;ReadPosRankSum=0.306;VQSLOD=2.2491;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:26:55.41:0,55,494	0/1:7,0:7:30.47:30,0,168	0/0:17,0:13:39.09:0,39,434	0/0:17,0:14:21.45:0,21,280	1/1:17,0:16:23.85:196,24,0	0/1:24,0:22:3.68:271,0,4	1/1:6,21:26:4.92:54,5,0	1/1:18,0:15:47.84:397,48,0	0/1:27,0:25:42.31:42,0,466	1/1:19,0:19:47.72:424,48,0	1/1:11,0:10:3.01:79,3,0	0/0:21,0:21:16.89:0,17,450	0/0:16,0:14:35.90:0,36,401	1/1:19,0:18:6.02:158,6,0	0/1:15,0:15:39.22:141,0,39	1/1:15,0:15:41.97:613,42,0	1/1:27,0:26:8.78:182,9,0	0/1:19,0:19:12.20:60,0,12	1/1:13,0:11:22.41:196,22,0	1/1:10,0:10:14.90:115,15,0	1/1:37,0:35:56.35:468,56,0	0/0:12,0:12:29.72:0,30,245	0/0:17,0:17:34.71:0,35,393	0/0:30,0:29:47.61:0,48,585	1/1:14,0:13:35.90:291,36,0	1/1:16,0:15:35.37:299,35,0	1/1:17,0:17:43.86:362,44,0	1/1:3,0:2:5.97:45,6,0
chr10	46527585	.	A	AT	10795.68	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-1.969;DP=621;FS=10.785;HRun=0;HaplotypeScore=93.5622;InbreedingCoeff=0.9998;MQ=85.61;MQ0=0;MQRankSum=-5.160;QD=43.01;ReadPosRankSum=1.614;VQSLOD=4.4642;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:78.25:0,78,1072	0/0:12,0:12:36.12:0,36,501	0/0:25,0:25:74.99:0,75,955	0/0:15,0:15:38.32:0,38,471	1/1:0,22:22:57.19:888,57,0	0/0:12,0:12:36.12:0,36,503	0/0:18,0:18:54.15:0,54,720	1/1:0,29:29:87.26:1319,87,0	0/0:24,0:24:72.24:0,72,1006	1/1:0,24:26:78.26:1201,78,0	1/1:2,17:19:48.08:734,48,0	0/0:20,0:20:57.19:0,57,793	0/0:25,0:25:75.25:0,75,1047	1/1:0,22:22:63.21:1006,63,0	0/0:26,0:26:78.25:0,78,1069	1/1:0,21:21:63.21:1006,63,0	1/1:0,21:21:60.20:958,60,0	1/1:0,36:36:93.32:1480,93,0	0/0:24,0:24:72.19:0,72,944	0/0:28,0:28:81.14:0,81,1067	0/0:23,0:23:69.22:0,69,944	0/0:15,0:15:45.13:0,45,596	0/0:23,0:23:66.10:0,66,863	0/0:23,0:23:69.23:0,69,964	1/1:0,19:20:42.14:671,42,0	1/1:0,25:25:72.21:1100,72,0	0/0:31,0:31:93.29:0,93,1280	1/1:0,10:10:27.09:431,27,0
chr10	46529749	.	A	AT	4561.98	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-12.728;DP=677;FS=12.199;HRun=9;HaplotypeScore=63.9041;InbreedingCoeff=0.9994;MQ=73.54;MQ0=1;MQRankSum=-1.241;QD=24.66;ReadPosRankSum=2.741;VQSLOD=4.9766;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,39:45:99:1095,99,0	0/0:14,0:14:35.98:0,36,313	0/0:20,0:19:30.06:0,30,254	0/0:17,0:16:32.37:0,32,276	0/0:21,0:21:50.96:0,51,438	0/0:22,0:23:58.98:0,59,491	0/0:18,0:18:41.98:0,42,365	0/0:32,0:32:77.96:0,78,677	1/1:3,21:24:48.13:531,48,0	0/0:32,0:32:65.95:0,66,570	0/0:20,0:20:47.98:0,48,417	1/1:2,16:18:36.10:398,36,0	1/1:1,23:24:40.12:671,40,0	0/0:16,0:16:38.97:0,39,338	0/0:34,0:34:89.94:0,90,776	0/0:31,0:31:74.97:0,75,651	0/0:32,0:32:77.97:0,78,677	0/0:19,0:19:41.94:0,42,360	0/0:18,0:19:44.02:0,44,370	0/0:23,0:23:53.96:0,54,469	0/0:21,0:21:50.97:0,51,443	1/1:3,17:20:48.13:527,48,0	1/1:4,20:24:60.16:662,60,0	1/1:3,27:30:46.36:677,46,0	0/0:26,0:26:59.95:0,60,517	0/0:23,1:24:50.95:0,51,440	0/0:35,0:35:83.96:0,84,729	0/0:14,0:14:23.99:0,24,208
chr10	46530814	.	CT	C	17730.91	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-4.315;DP=768;FS=7.042;HRun=8;HaplotypeScore=94.3102;InbreedingCoeff=0.9813;MQ=73.51;MQ0=0;MQRankSum=-6.544;QD=24.09;ReadPosRankSum=4.134;VQSLOD=5.1621;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,32:38:87.13:840,87,0	1/1:0,4:4:12.02:116,12,0	0/0:16,0:16:36.10:0,36,418	0/0:15,1:15:27.03:0,27,298	1/1:3,28:31:81.08:773,81,0	1/1:4,22:27:62.12:585,62,0	1/1:0,22:22:57.09:550,57,0	1/1:4,45:49:99:1261,132,0	1/1:2,25:27:69.11:666,69,0	1/1:3,28:31:84.10:803,84,0	1/1:4,16:20:39.05:377,39,0	1/1:3,38:41:99:1043,108,0	1/1:1,31:32:78.11:753,78,0	1/1:0,25:25:69.11:666,69,0	1/1:2,34:36:99:985,102,0	1/1:1,20:21:51.08:492,51,0	1/1:4,20:24:48.07:463,48,0	1/1:3,12:15:30.04:290,30,0	1/1:4,26:30:78.12:752,78,0	1/1:7,28:35:77.56:743,78,0	1/1:2,29:31:78.12:753,78,0	1/1:1,26:27:69.10:666,69,0	1/1:2,21:23:60.10:579,60,0	1/1:1,26:27:69.11:666,69,0	1/1:4,25:29:35.87:630,36,0	1/1:3,42:45:99:1206,126,0	1/1:2,35:37:90.14:869,90,0	1/1:1,8:9:21.03:203,21,0
chr10	46531537	.	AC	A	15875.15	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=13.893;DP=719;FS=18.261;HRun=3;HaplotypeScore=70.6860;InbreedingCoeff=0.9993;MQ=90.60;MQ0=0;MQRankSum=-2.207;QD=34.36;ReadPosRankSum=2.415;VQSLOD=3.2270;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,33:33:96.30:1190,96,0	0/0:11,0:11:33.09:0,33,455	0/0:22,0:22:66.18:0,66,885	0/0:35,0:35:90.05:0,90,1195	1/1:1,22:23:57.18:707,57,0	0/0:22,0:22:66.09:0,66,920	0/0:23,0:23:63.20:0,63,889	1/1:1,22:23:66.18:803,66,0	1/1:0,27:27:75.24:930,75,0	1/1:1,21:22:63.17:757,63,0	1/1:1,15:16:48.15:593,48,0	1/1:1,24:25:66.21:818,66,0	1/1:0,26:26:75.24:930,75,0	1/1:1,29:30:84.26:1040,84,0	0/0:37,0:37:99:0,105,1494	1/1:2,41:43:99:1413,114,0	1/1:1,39:40:99:1339,108,0	1/1:0,29:29:81.25:1004,81,0	0/0:18,0:18:48.14:0,48,671	0/0:16,0:16:42.14:0,42,605	0/0:35,0:35:99:0,102,1431	1/1:1,21:22:63.20:781,63,0	1/1:0,15:15:45.14:558,45,0	1/1:1,40:41:99:1413,114,0	1/1:1,14:15:42.13:521,42,0	1/1:0,23:23:66.21:818,66,0	0/0:38,0:38:99:0,114,1627	1/1:2,7:9:21.07:260,21,0
chr10	46532239	.	T	TA	13610.20	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-14.624;DP=635;FS=12.322;HRun=6;HaplotypeScore=54.8163;InbreedingCoeff=0.9985;MQ=83.83;MQ0=0;MQRankSum=-2.648;QD=32.02;ReadPosRankSum=2.531;VQSLOD=4.4758;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,34:34:96.31:1208,96,0	0/0:8,0:8:21.05:0,21,214	0/0:25,0:25:63.10:0,63,624	0/0:11,0:11:24.05:0,24,243	1/1:3,22:25:66.18:813,66,0	0/0:23,0:23:57.12:0,57,582	0/0:22,0:22:66.13:0,66,666	1/1:3,20:23:60.14:711,60,0	1/1:1,31:32:81.26:1018,81,0	1/1:5,19:24:57.17:704,57,0	1/1:1,16:17:45.14:566,45,0	1/1:6,21:27:57.18:717,57,0	1/1:1,16:17:45.14:566,45,0	1/1:2,27:29:78.25:981,78,0	0/0:34,0:34:96.22:0,96,980	1/1:2,21:23:51.16:642,51,0	1/1:2,24:26:63.20:793,63,0	1/1:0,13:13:39.12:491,39,0	0/0:26,0:26:69.15:0,69,703	0/0:23,0:23:66.15:0,66,673	0/0:16,0:16:48.11:0,48,490	1/1:1,20:21:54.17:679,54,0	1/1:2,19:21:57.18:717,57,0	1/1:2,28:30:75.24:944,75,0	1/1:4,25:29:66.18:830,66,0	1/1:0,26:26:78.23:967,78,0	0/0:22,0:22:63.14:0,63,643	1/1:0,8:8:21.07:264,21,0
chr10	46534325	.	GA	G	18576.19	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-0.998;DP=740;FS=11.931;HRun=7;HaplotypeScore=75.1746;InbreedingCoeff=0.9957;MQ=85.23;MQ0=0;MQRankSum=-9.400;QD=26.84;ReadPosRankSum=7.067;VQSLOD=4.0201;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,36:43:99:1010,99,0	1/1:0,11:11:33.08:337,33,0	0/0:22,0:22:54.16:0,54,650	0/0:26,0:26:39.12:0,39,473	1/1:4,26:30:75.09:744,75,0	1/1:1,30:31:81.18:826,81,0	1/1:4,26:30:72.16:734,72,0	1/1:4,22:26:66.14:673,66,0	1/1:0,23:23:69.16:704,69,0	1/1:2,25:27:78.17:794,78,0	1/1:2,25:27:72.16:735,72,0	1/1:1,26:27:66.13:667,66,0	1/1:2,29:31:87.20:887,87,0	1/1:1,19:20:54.12:551,54,0	1/1:0,25:25:57.13:582,57,0	1/1:0,23:23:66.15:673,66,0	1/1:2,35:37:93.21:949,93,0	1/1:4,27:31:81.18:826,81,0	1/1:1,17:18:51.12:520,51,0	1/1:3,26:29:72.15:734,72,0	1/1:3,39:42:99:1163,114,0	1/1:2,23:25:66.14:672,66,0	1/1:1,19:20:54.12:550,54,0	1/1:1,26:27:78.18:796,78,0	1/1:2,17:19:48.10:490,48,0	1/1:2,27:29:81.18:826,81,0	1/1:2,33:35:93.21:949,93,0	1/1:0,6:6:18.04:184,18,0
chr10	46535655	.	A	AT	32069.36	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-3.524;DP=752;FS=16.219;HRun=0;HaplotypeScore=109.7122;InbreedingCoeff=0.9901;MQ=75.39;MQ0=0;MQRankSum=-7.236;QD=44.36;ReadPosRankSum=4.896;VQSLOD=2.8645;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,42:44:99:1870,117,0	1/1:0,10:10:30.10:480,30,0	0/0:17,0:18:16.47:0,16,423	0/0:10,0:11:18.73:0,19,195	1/1:1,27:28:81.28:1295,81,0	1/1:1,15:16:39.13:623,39,0	1/1:0,35:35:96.33:1535,96,0	1/1:1,23:24:69.20:1048,69,0	1/1:0,23:23:66.23:1055,66,0	1/1:2,29:31:90.29:1413,90,0	1/1:0,23:23:66.23:1055,66,0	1/1:1,25:26:72.24:1140,72,0	1/1:0,31:31:87.30:1391,87,0	1/1:2,37:39:99:1583,99,0	1/1:1,32:33:93.32:1487,93,0	1/1:0,31:31:87.30:1391,87,0	1/1:0,32:32:96.33:1535,96,0	1/1:0,22:22:57.19:903,57,0	1/1:1,19:20:60.19:929,60,0	1/1:0,29:29:75.26:1199,75,0	1/1:1,39:39:99:1870,117,0	1/1:0,36:36:99:1679,105,0	1/1:0,22:22:63.21:1007,63,0	1/1:1,30:31:81.28:1295,81,0	1/1:0,20:19:54.18:863,54,0	1/1:0,34:34:99:1601,102,0	1/1:0,25:25:72.25:1151,72,0	1/1:2,16:18:42.14:671,42,0
chr10	46536405	.	CCG	C	361.15	PASS	AB=0.973;AC=15;AF=0.268;AN=56;BaseQRankSum=7.598;DP=277;FS=10.481;HRun=0;HaplotypeScore=51.1629;InbreedingCoeff=-0.0944;MQ=85.78;MQ0=1;MQRankSum=-1.371;QD=2.41;ReadPosRankSum=9.038;VQSLOD=-0.5799;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:18,0:18:58.99:59,0,80	0/0:2,0:2:5.98:0,6,63	0/0:21,0:17:23.37:0,23,281	0/0:12,0:9:20.83:0,21,172	0/1:10,0:10:0.07:0,0,92	0/0:6,1:6:11.86:0,12,79	0/1:18,0:18:6.13:6,0,108	0/0:6,0:6:8.03:0,8,88	0/1:11,0:11:19.64:20,0,36	0/0:9,0:9:1.93:0,2,103	0/1:4,0:4:2.17:2,0,20	0/0:10,0:9:0.67:0,1,55	0/1:8,0:8:4.82:28,0,5	0/0:15,0:15:7.44:0,7,187	0/0:9,0:9:26.91:0,27,329	0/1:10,0:10:18.03:18,0,29	0/1:13,0:13:23.09:23,0,66	0/1:7,1:8:11.33:78,0,11	0/0:9,0:9:26.96:0,27,242	0/0:5,0:5:15.01:0,15,163	0/0:10,0:9:23.63:0,24,198	0/1:8,0:8:12.07:23,0,12	0/1:3,1:4:0.12:0,0,21	1/1:7,1:8:12.40:67,12,0	0/1:6,0:6:2.50:3,0,51	0/1:23,1:24:4:174,0,4	0/0:8,0:9:24.84:0,25,259	0/0:3,0:3:2.08:0,2,42
chr10	46536575	.	A	AG	4174.26	PASS	AB=0.941;AC=37;AF=0.661;AN=56;BaseQRankSum=-3.865;DP=427;FS=10.168;HRun=0;HaplotypeScore=45.9082;InbreedingCoeff=0.8625;MQ=59.91;MQ0=32;MQRankSum=3.445;QD=14.25;ReadPosRankSum=3.761;VQSLOD=4.3209;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:31,0:28:40.71:415,41,0	0/0:8,0:8:14.32:0,14,94	0/0:21,0:9:20.71:0,21,155	0/0:16,0:7:14.50:0,15,93	1/1:18,0:18:41.57:321,42,0	0/0:3,8:11:5.87:0,6,37	0/1:15,1:16:19.17:165,0,19	1/1:33,0:30:64.83:509,65,0	1/1:13,0:13:29.14:227,29,0	1/1:14,0:14:26.21:242,26,0	1/1:9,0:8:19.93:144,20,0	1/1:17,0:16:38.75:295,39,0	1/1:16,0:15:29.78:234,30,0	1/1:16,0:16:25.82:216,26,0	0/0:12,0:12:26.23:0,26,175	1/1:7,0:6:6.91:90,7,0	1/1:22,0:19:36.88:270,37,0	1/1:20,0:18:34.04:236,34,0	0/0:13,0:11:25.73:0,26,205	0/0:18,0:17:26.12:0,26,145	0/0:12,0:11:23.19:0,23,175	1/1:6,0:5:8.31:73,8,0	1/1:14,0:12:16.44:130,16,0	1/1:13,0:12:20.89:159,21,0	1/1:8,0:8:13.83:103,14,0	1/1:13,0:13:30.08:261,30,0	0/0:23,0:20:41.85:0,42,313	1/1:7,0:5:11.90:84,12,0
chr10	46537923	.	G	GA	14605.05	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-15.796;DP=645;FS=6.988;HRun=7;HaplotypeScore=56.1242;InbreedingCoeff=0.9987;MQ=72.38;MQ0=0;MQRankSum=-3.141;QD=31.68;ReadPosRankSum=1.204;VQSLOD=5.0183;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,14:17:42.13:507,42,0	0/0:12,0:12:30.03:0,30,284	0/0:17,0:17:48.08:0,48,463	0/0:14,0:13:32.72:0,33,295	1/1:3,25:28:72.22:869,72,0	1/1:3,29:32:78.24:942,78,0	1/1:0,26:26:72.22:870,72,0	1/1:6,33:39:99:1187,99,0	1/1:2,21:23:37.29:732,37,0	1/1:4,29:34:93.26:1098,93,0	1/1:0,17:17:51.16:616,51,0	1/1:0,24:24:60.18:725,60,0	1/1:1,19:20:54.17:652,54,0	1/1:4,20:24:40.24:762,40,0	0/0:25,0:25:69.11:0,69,666	1/1:1,23:24:69.21:834,69,0	1/1:1,13:14:36.11:435,36,0	1/1:4,23:27:70.77:837,71,0	0/0:22,0:22:60.09:0,60,579	0/0:41,0:41:99:0,111,1067	0/0:11,0:11:33.05:0,33,318	1/1:1,26:27:72.22:870,72,0	1/1:5,15:20:42.13:507,42,0	1/1:0,7:7:21.06:254,21,0	1/1:0,16:16:42.13:507,42,0	1/1:3,31:34:93.26:1110,93,0	0/0:42,0:42:99:0,126,1215	1/1:0,8:8:24.07:290,24,0
chr10	46538825	.	ACACACCTGGAGTACTG	A	8035.60	PASS	AC=46;AF=1.000;AN=46;DP=562;FS=0.000;HRun=0;HaplotypeScore=243.0079;InbreedingCoeff=-0.0675;MQ=70.74;MQ0=1;QD=18.35;VQSLOD=3.2244;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:29,9:38:6.02:244,6,0	1/1:7,1:8:3.01:129,3,0	./.	./.	1/1:12,7:19:24.02:573,24,0	1/1:13,1:14:5.99:150,6,0	1/1:20,0:20:6.01:74,6,0	./.	1/1:8,7:15:15.05:646,15,0	1/1:18,3:21:18.06:619,18,0	1/1:13,2:15:5.97:125,6,0	1/1:13,3:16:6.02:258,6,0	1/1:9,0:9:6:75,6,0	1/1:17,5:22:21.07:771,21,0	1/1:16,5:21:12.04:517,12,0	1/1:13,1:14:3.01:129,3,0	1/1:11,4:15:9.03:388,9,0	./.	1/1:19,3:22:9.03:328,9,0	1/1:14,11:25:27.06:722,27,0	./.	1/1:15,5:20:11.95:167,12,0	1/1:15,2:17:12.03:181,12,0	1/1:14,3:17:3.01:129,3,0	1/1:13,3:16:12.04:510,12,0	1/1:14,4:18:18.06:601,18,0	1/1:33,3:36:12.02:310,12,0	1/1:17,3:20:9.03:388,9,0
chr10	46538922	.	C	CT	3917.71	PASS	AB=0.694;AC=23;AF=0.411;AN=56;BaseQRankSum=-6.748;DP=628;FS=0.000;HRun=12;HaplotypeScore=100.0517;InbreedingCoeff=0.4722;MQ=70.31;MQ0=1;MQRankSum=-1.733;QD=11.39;ReadPosRankSum=-0.144;VQSLOD=3.1580;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:32,3:35:30.64:31,0,415	0/1:6,1:7:11.30:11,0,91	0/0:19,0:18:21.76:0,22,128	0/0:19,0:16:5.54:0,6,79	0/1:11,18:30:41.98:224,0,42	0/1:3,18:22:15.73:316,0,16	1/1:5,15:20:38.65:361,39,0	1/1:18,17:35:5.07:351,5,0	0/0:14,0:14:23.69:0,24,167	0/1:10,7:18:1.59:261,0,2	1/1:4,21:25:39.01:368,39,0	0/0:22,1:24:20.55:0,21,316	0/0:16,0:16:35.73:0,36,259	1/1:5,9:14:21.03:204,21,0	0/0:17,0:17:28.17:0,28,188	1/1:5,17:23:17.12:320,17,0	1/1:9,11:20:19.83:327,20,0	0/1:10,14:24:14.46:280,0,14	0/0:26,0:27:65.70:0,66,448	0/0:21,1:23:17.53:0,18,279	0/0:18,1:22:11.82:0,12,233	0/0:24,0:25:49.15:0,49,355	0/0:17,0:22:17.86:0,18,249	0/0:25,0:26:59.63:0,60,436	0/1:9,19:29:4.42:267,0,4	1/1:12,16:29:28.34:414,28,0	0/0:25,0:28:60.53:0,61,423	1/1:6,7:13:2.13:182,2,0
chr10	46539963	.	TTGTG	T	1150.27	PASS	AB=0.963;AC=23;AF=0.442;AN=52;BaseQRankSum=4.797;DP=587;FS=1.344;HRun=0;HaplotypeScore=200.7410;InbreedingCoeff=0.5738;MQ=65.23;MQ0=9;MQRankSum=-2.043;QD=4.66;ReadPosRankSum=1.266;VQSLOD=2.8460;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:11.14:0,11,75	0/0:10,0:10:3.01:0,3,37	./.	0/0:37,0:23:0.78:0,1,92	1/1:5,3:9:2.33:8,2,0	0/0:14,0:29:14.83:0,15,136	0/0:19,0:20:12.40:0,12,164	1/1:23,0:22:4.44:71,4,0	0/0:23,0:23:1.91:0,2,69	0/1:14,2:14:5.10:167,0,5	0/1:12,1:13:0:0,0,0	0/0:22,0:23:9.66:0,10,93	0/1:11,0:11:0.10:0,0,15	1/1:17,13:29:31.43:286,31,0	./.	1/1:16,3:18:28.20:262,28,0	1/1:19,1:20:11.31:87,11,0	1/1:16,2:18:17.20:193,17,0	0/0:21,0:21:28.83:0,29,436	0/0:15,0:17:20.52:0,21,339	0/0:57,0:57:61.19:0,61,1220	0/1:15,0:15:0.01:0,0,0	0/0:9,0:10:5.97:0,6,45	0/1:20,0:19:0:0,0,0	1/1:15,5:21:0.82:64,1,0	1/1:15,1:16:6.98:137,7,0	0/0:20,0:21:39.28:0,39,618	1/1:15,1:14:5.67:35,6,0
chr10	46539992	.	TGC	T	2428.66	PASS	AB=0.939;AC=33;AF=0.660;AN=50;BaseQRankSum=9.242;DP=548;FS=5.445;HRun=0;HaplotypeScore=215.5872;InbreedingCoeff=0.3856;MQ=38.68;MQ0=15;MQRankSum=-5.836;QD=6.41;ReadPosRankSum=-1.276;VQSLOD=2.3930;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:21,1:22:2.92:17,3,0	0/0:5,0:5:2.74:0,3,12	./.	0/1:21,0:5:8.99:9,0,41	0/0:13,0:12:0.36:0,0,0	0/1:26,0:25:24.46:24,0,139	0/1:25,2:26:78.03:78,0,325	1/1:16,1:11:20.98:133,21,0	1/1:21,3:24:14.86:199,15,0	1/1:19,9:25:54.18:448,54,0	0/1:5,2:7:0:0,0,0	0/1:19,1:20:9.48:67,0,9	1/1:12,0:12:5.51:54,6,0	1/1:30,3:32:35.68:301,36,0	./.	1/1:13,5:16:29.80:254,30,0	1/1:16,3:19:15.97:115,16,0	1/1:11,4:13:32.67:264,33,0	0/0:25,0:23:59.46:0,59,555	0/1:14,0:14:2.68:3,0,212	0/0:77,0:73:24.50:0,25,1074	0/1:9,1:10:0:0,0,0	./.	1/1:18,0:17:2.89:24,3,0	1/1:18,3:21:8.93:67,9,0	1/1:17,3:20:37.76:399,38,0	0/0:24,0:24:14.12:0,14,331	1/1:5,2:5:14.89:127,15,0
chr10	46540001	.	GTGCA	G	1950.18	PASS	AB=0.907;AC=30;AF=0.577;AN=52;BaseQRankSum=10.352;DP=535;FS=3.203;HRun=0;HaplotypeScore=232.8997;InbreedingCoeff=0.7009;MQ=36.00;MQ0=15;MQRankSum=-9.098;QD=6.63;ReadPosRankSum=-0.100;VQSLOD=2.6711;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:22,3:25:0.16:0,0,0	0/0:4,0:4:3.01:0,3,57	./.	0/0:23,0:5:15.05:0,15,332	0/1:10,3:12:0.04:0,0,0	0/0:24,0:23:0.30:0,0,468	0/0:25,0:24:25.89:0,26,1316	1/1:12,8:14:33.47:557,33,0	1/1:22,0:22:20:154,20,0	1/1:22,3:22:21.64:270,22,0	0/0:7,1:8:0.47:0,0,1	1/1:17,1:18:2.75:26,3,0	1/1:13,0:13:14.97:157,15,0	1/1:15,14:29:20.32:183,20,0	./.	1/1:13,3:14:9.33:83,9,0	1/1:17,2:19:18.33:108,18,0	1/1:13,2:13:29.70:247,30,0	0/0:25,0:23:66.23:0,66,1497	0/0:14,0:14:20.95:0,21,431	0/0:74,0:70:99:0,118,2815	0/1:11,1:12:0:0,0,0	1/1:6,1:7:0.46:1,0,0	0/1:14,0:13:0.22:0,0,0	1/1:14,6:20:1.48:4,1,0	1/1:16,2:18:24.01:235,24,0	0/0:18,0:18:17.89:0,18,371	1/1:7,1:6:13.86:88,14,0
chr10	46540003	.	GCA	G	1176.59	PASS	AB=0.985;AC=29;AF=0.558;AN=52;BaseQRankSum=10.565;DP=523;FS=0.535;HRun=0;HaplotypeScore=223.8644;InbreedingCoeff=0.6243;MQ=35.88;MQ0=13;MQRankSum=-9.246;QD=4.26;ReadPosRankSum=0.654;VQSLOD=2.7610;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:23:0.01:0,0,0	0/0:4,0:4:2.99:0,3,23	./.	0/0:23,0:5:15.05:0,15,269	0/0:12,1:12:0.36:0,0,0	0/0:23,0:22:3.32:0,3,394	0/0:25,0:24:25.95:0,26,989	1/1:18,1:13:30.03:279,30,0	1/1:20,1:21:3.54:73,4,0	1/1:24,0:21:36.68:204,37,0	0/1:8,0:8:0:0,0,0	0/1:18,0:18:11.69:14,0,12	1/1:13,0:13:12.58:75,13,0	1/1:24,3:27:13.96:67,14,0	./.	1/1:15,0:14:2.08:35,2,0	1/1:15,5:20:17.78:173,18,0	1/1:14,1:13:24.94:106,25,0	0/0:26,0:24:69.24:0,69,1268	0/0:15,0:15:23.93:0,24,393	0/0:72,0:68:99:0,121,2263	0/1:11,1:12:0:0,0,0	1/1:7,0:7:0.47:1,0,0	0/1:11,0:11:0.10:0,0,0	1/1:20,0:20:1.25:3,1,0	1/1:14,1:15:30.30:244,30,0	0/0:16,0:17:20.94:0,21,388	1/1:8,0:6:10.78:63,11,0
chr10	46540004	.	CATGT	C	1306.61	PASS	AB=0.883;AC=29;AF=0.558;AN=52;BaseQRankSum=9.705;DP=516;FS=1.118;HRun=0;HaplotypeScore=228.4504;InbreedingCoeff=0.6316;MQ=35.94;MQ0=13;MQRankSum=-7.992;QD=4.75;ReadPosRankSum=-0.031;VQSLOD=2.6905;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:17,4:21:0.02:0,0,0	0/0:4,0:4:3.01:0,3,59	./.	0/0:23,0:6:15.05:0,15,373	0/1:10,0:11:0:0,0,0	0/0:23,0:22:10:0,10,579	0/0:25,0:24:22.16:0,22,1399	1/1:19,0:13:31.23:331,31,0	1/1:13,8:21:17.24:201,17,0	0/1:23,0:20:17.22:147,0,17	0/0:8,0:8:0.47:0,0,1	1/1:9,8:18:7.05:55,7,0	1/1:6,6:13:6.20:179,6,0	1/1:27,0:27:14.95:79,15,0	./.	1/1:14,0:13:7.88:30,8,0	1/1:20,0:20:8.71:96,9,0	1/1:14,0:12:5.99:115,6,0	0/0:27,0:24:69.20:0,69,1504	0/0:16,0:16:27.03:0,27,510	0/0:71,0:67:99:0,121,2940	0/1:9,3:12:0:0,0,0	1/1:5,2:7:2.37:8,2,0	0/1:10,1:11:0:0,0,0	1/1:18,0:20:2.67:12,3,0	1/1:15,0:15:21.63:170,22,0	0/0:16,0:16:21.05:0,21,363	1/1:8,0:6:11.88:49,12,0
chr10	46540008	.	T	TGC	639.80	PASS	AB=0.965;AC=17;AF=0.315;AN=54;BaseQRankSum=5.658;DP=557;FS=0.000;HRun=0;HaplotypeScore=259.1166;InbreedingCoeff=-0.0642;MQ=35.22;MQ0=13;MQRankSum=-7.465;QD=2.52;ReadPosRankSum=1.750;VQSLOD=1.8110;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:22:0.09:0,0,0	0/0:5,0:5:5.51:0,6,53	./.	0/0:30,0:8:20.99:0,21,270	0/1:12,0:12:0:0,0,1	0/0:23,0:22:24.07:0,24,346	0/0:24,0:23:54.17:0,54,804	0/1:21,0:15:16.91:121,0,17	0/1:22,0:22:31.70:34,0,32	0/1:19,2:19:99:108,0,165	0/1:9,1:10:0:0,0,0	0/0:18,0:18:10.31:0,10,53	0/1:16,0:15:2.25:2,0,23	0/1:27,1:28:14.33:100,0,14	0/0:18,0:16:7.90:0,8,70	0/1:16,1:17:20.55:57,0,21	0/1:21,1:22:20.75:101,0,21	0/1:14,3:15:74.66:177,0,75	0/0:26,0:23:62.46:0,62,791	0/0:17,0:17:27:0,27,321	0/0:76,0:72:99:0,123,1671	0/0:11,0:11:0:0,0,0	1/1:9,0:9:2.39:8,2,0	0/1:14,0:14:0.21:0,0,0	0/0:19,1:20:2.91:0,3,23	0/1:17,0:17:41.65:42,0,107	0/0:17,0:17:21.03:0,21,247	0/1:6,0:6:18.56:19,0,97
chr10	46540016	.	CGT	C	1691.91	PASS	AB=0.673;AC=21;AF=0.375;AN=56;BaseQRankSum=8.564;DP=541;FS=5.201;HRun=0;HaplotypeScore=224.6886;InbreedingCoeff=0.3473;MQ=35.79;MQ0=10;MQRankSum=-8.432;QD=7.05;ReadPosRankSum=1.409;VQSLOD=2.8364;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:7,12:20:0.88:0,1,2	0/0:2,0:2:5.23:0,5,60	0/0:20,0:2:6:0,6,73	0/0:33,0:11:27.06:0,27,434	0/0:4,9:13:0.47:0,0,1	0/0:24,0:23:36.12:0,36,610	0/0:28,0:27:72.23:0,72,1189	0/1:13,7:17:0.93:181,0,1	1/1:9,11:20:6.82:77,7,0	0/1:9,11:18:46.13:418,0,46	0/0:2,7:9:0:0,0,0	0/1:11,8:19:6.32:43,0,6	1/1:8,8:15:14.04:154,14,0	0/1:18,9:27:14.83:64,0,15	0/0:16,0:15:6.26:0,6,19	0/1:4,12:16:19.40:31,0,19	1/1:11,9:20:18.44:195,18,0	0/1:9,9:16:97.03:97,0,97	0/0:21,0:21:50.82:0,51,554	0/0:15,0:16:20.84:0,21,344	0/0:67,0:69:99:0,113,1712	0/0:5,5:10:0:0,0,0	1/1:3,6:9:2.88:24,3,0	0/1:6,8:14:0:0,0,0	1/1:10,10:20:3.01:31,3,0	1/1:3,12:16:13.24:398,13,0	0/0:17,0:17:15.60:0,16,248	1/1:1,4:5:1.52:140,2,0
chr10	46540022	.	T	TGCGCGC	1123.31	PASS	AB=0.978;AC=18;AF=0.321;AN=56;BaseQRankSum=5.439;DP=573;FS=0.660;HRun=0;HaplotypeScore=275.3666;InbreedingCoeff=-0.0024;MQ=35.50;MQ0=13;MQRankSum=-6.799;QD=3.90;ReadPosRankSum=0.208;VQSLOD=1.8570;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:23,2:25:0.27:0,0,1	0/0:2,0:2:6.02:0,6,123	0/0:25,0:3:6.02:0,6,139	0/0:39,0:12:30.10:0,30,676	0/1:15,0:15:0.32:0,0,0	0/0:22,0:21:39.13:0,39,920	0/0:28,0:28:75.26:0,75,1728	0/0:23,0:21:40.01:0,40,224	0/1:22,1:23:1.92:2,0,14	0/1:20,1:20:78.17:291,0,78	0/0:13,0:13:0:0,0,1	0/1:17,2:19:19:34,0,19	0/1:17,1:17:21.68:22,0,25	0/1:28,0:28:24.45:66,0,24	0/0:12,0:12:9.03:0,9,159	0/1:17,0:17:14.42:172,0,14	0/1:20,0:20:38.04:219,0,38	1/1:18,0:16:12.46:330,12,0	0/1:22,0:21:18.50:19,0,522	0/0:16,0:16:25.33:0,25,549	0/0:65,0:63:99:0,108,2341	0/1:12,0:12:0.07:0,0,0	1/1:10,1:11:1.90:6,2,0	0/1:17,0:17:0.20:0,0,0	0/0:23,0:23:2.93:0,3,21	0/1:16,0:16:35.76:36,0,156	0/0:17,0:17:27.05:0,27,534	0/1:5,0:5:58.24:66,0,58
chr10	46540024	.	CGTGTGTGTAT	C	3752.05	PASS	AB=1.000;AC=30;AF=0.556;AN=54;BaseQRankSum=11.180;DP=551;FS=0.000;HRun=0;HaplotypeScore=268.3402;InbreedingCoeff=0.6495;MQ=35.85;MQ0=12;MQRankSum=-8.989;QD=13.79;ReadPosRankSum=2.801;VQSLOD=2.2357;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:4.12:0,4,19	0/1:2,0:2:36.06:36,0,71	0/0:27,0:5:15.05:0,15,446	0/0:42,0:12:33.03:0,33,1099	./.	0/0:24,0:23:45.15:0,45,1947	0/0:26,0:26:75.26:0,75,3220	0/1:20,0:20:18.21:443,0,18	1/1:23,0:23:11.25:169,11,0	1/1:19,2:20:51.16:849,51,0	0/0:12,1:13:0.47:0,0,2	1/1:16,1:17:5.71:111,6,0	1/1:17,0:16:14.18:181,14,0	1/1:18,8:26:9.02:154,9,0	1/1:12,0:12:12.03:155,12,0	1/1:14,2:16:8.91:175,9,0	1/1:20,0:20:19.05:253,19,0	1/1:15,2:16:16.60:288,17,0	0/0:12,0:11:33.03:0,33,1105	0/0:16,0:16:27.09:0,27,1076	0/0:63,0:61:99:0,105,4778	0/1:12,0:12:0:0,0,0	1/1:10,1:11:2.87:21,3,0	0/1:17,0:17:0.23:0,0,0	1/1:17,4:21:2.92:47,3,0	1/1:14,1:15:41.71:590,42,0	0/0:18,0:18:30.10:0,30,952	1/1:4,1:5:15.05:280,15,0
chr10	46540031	.	GTA	G	2598.73	PASS	AB=0.626;AC=30;AF=0.577;AN=52;BaseQRankSum=12.085;DP=545;FS=1.651;HRun=0;HaplotypeScore=210.8154;InbreedingCoeff=0.7412;MQ=37.66;MQ0=12;MQRankSum=-9.565;QD=11.20;ReadPosRankSum=3.763;VQSLOD=3.5723;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:11,14:25:0.21:0,0,1	0/1:1,1:2:12.98:36,0,13	0/0:35,0:6:18.05:0,18,286	0/0:48,0:15:41.27:0,41,555	./.	0/0:29,0:29:63.15:0,63,1037	0/0:27,0:27:78.25:0,78,1372	1/1:5,13:18:36.37:441,36,0	1/1:5,14:19:12.03:135,12,0	1/1:4,14:17:51.04:588,51,0	0/0:1,11:12:0:0,0,0	1/1:7,11:18:8.58:78,9,0	1/1:2,11:12:17.07:173,17,0	1/1:9,11:20:8.97:101,9,0	1/1:2,11:13:12:146,12,0	1/1:2,13:15:8.91:78,9,0	1/1:7,9:16:12.85:139,13,0	1/1:4,9:13:14.91:163,15,0	0/0:13,0:12:31.86:0,32,491	0/0:17,0:17:33.08:0,33,567	0/0:65,0:63:95.52:0,96,1961	./.	1/1:3,8:11:2.89:27,3,0	0/1:5,12:17:0:0,0,0	1/1:6,13:19:3:33,3,0	1/1:1,13:15:42.03:469,42,0	0/0:20,0:20:38.92:0,39,578	1/1:1,4:5:14.98:179,15,0
chr10	46540040	.	TGCGC	T	1670.17	PASS	AB=0.979;AC=32;AF=0.615;AN=52;BaseQRankSum=11.391;DP=572;FS=5.096;HRun=0;HaplotypeScore=226.3477;InbreedingCoeff=0.5268;MQ=41.92;MQ0=11;MQRankSum=-9.112;QD=5.32;ReadPosRankSum=5.244;VQSLOD=2.0955;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:0.34:0,0,1	1/1:1,0:1:3.01:33,3,0	0/0:31,0:8:20.82:0,21,431	0/1:42,1:17:10.77:11,0,494	./.	0/0:28,0:28:65.89:0,66,1276	0/0:33,0:33:72.23:0,72,1272	1/1:21,0:21:3.57:192,4,0	1/1:15,0:15:11.78:104,12,0	1/1:17,0:16:22.96:353,23,0	0/1:13,0:13:0:0,0,0	1/1:18,0:18:1.48:63,1,0	1/1:15,0:14:16.29:173,16,0	1/1:23,0:23:5.17:65,5,0	1/1:16,0:17:11.94:116,12,0	1/1:18,0:18:2.88:31,3,0	1/1:12,0:13:1.54:75,2,0	1/1:14,0:14:5.60:65,6,0	0/0:13,0:13:28.68:0,29,650	0/0:17,0:17:35.91:0,36,918	0/0:59,3:61:99:0,108,2539	./.	1/1:13,0:13:2.99:25,3,0	0/1:22,0:23:0:0,0,0	1/1:20,0:20:2.99:24,3,0	1/1:21,0:21:34.93:397,35,0	0/0:18,1:19:36.12:0,36,875	0/1:7,0:7:25.20:111,0,25
chr10	46540048	.	CGT	C	2877.78	PASS	AB=0.529;AC=32;AF=0.615;AN=52;BaseQRankSum=11.000;DP=601;FS=1.612;HRun=0;HaplotypeScore=216.9577;InbreedingCoeff=0.7430;MQ=46.47;MQ0=11;MQRankSum=-9.592;QD=8.97;ReadPosRankSum=1.132;VQSLOD=3.0962;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,27:31:5.93:47,6,0	1/1:1,1:2:6.01:62,6,0	0/0:31,0:11:30.04:0,30,400	0/0:42,0:17:29.28:0,29,374	./.	0/0:28,0:28:75.21:0,75,1188	0/0:26,0:26:63.19:0,63,1000	1/1:7,18:25:53.66:570,54,0	1/1:1,19:20:12.02:129,12,0	1/1:11,10:21:46.27:480,46,0	0/0:4,10:14:0:0,0,0	1/1:3,17:20:11.49:104,11,0	1/1:2,17:19:22.64:228,23,0	1/1:4,20:24:9.03:107,9,0	0/1:1,24:25:4.91:124,0,5	1/1:1,17:18:3.01:38,3,0	1/1:9,6:15:11.64:125,12,0	1/1:4,10:14:15:165,15,0	0/0:11,0:11:26.25:0,26,354	0/0:18,0:18:39.12:0,39,638	0/0:58,0:57:99:0,105,1633	./.	1/1:0,13:13:3.01:34,3,0	0/1:4,19:23:0:0,0,0	1/1:3,20:23:3.01:39,3,0	1/1:3,18:21:54.07:588,54,0	0/0:22,0:22:42.03:0,42,604	1/1:4,3:7:18.06:224,18,0
chr10	46541117	.	G	GA	1926.42	PASS	AB=0.744;AC=21;AF=0.389;AN=54;BaseQRankSum=3.568;DP=284;FS=157.904;HRun=1;HaplotypeScore=49.4517;InbreedingCoeff=-0.4672;MQ=66.56;MQ0=5;MQRankSum=-3.101;QD=9.58;ReadPosRankSum=1.698;VQSLOD=0.1773;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:9,10:19:99:225,0,173	./.	0/1:28,0:14:2.93:3,0,293	0/1:26,0:11:6.03:6,0,219	0/1:4,2:6:35.91:36,0,113	0/0:18,0:18:46.36:0,46,581	0/0:27,0:27:75.71:0,76,1027	0/1:16,2:17:52.50:53,0,434	0/1:2,4:6:71.78:83,0,72	0/1:1,5:6:23.83:222,0,24	0/1:1,3:4:32.68:85,0,33	0/1:5,1:6:57.64:58,0,110	0/1:3,4:7:99:170,0,104	0/1:6,1:7:32.91:33,0,152	0/1:6,2:8:77.86:78,0,144	0/1:4,3:7:99:125,0,107	1/1:1,10:11:21.07:333,21,0	0/1:5,1:6:36.45:36,0,71	0/0:7,0:7:18.51:0,19,226	0/0:3,0:3:6.01:0,6,67	0/0:16,0:16:45.15:0,45,625	0/1:4,5:9:29.15:143,0,29	0/1:5,2:8:35.45:35,0,97	0/1:2,3:5:38.92:39,0,75	0/1:3,1:4:39.06:39,0,74	0/1:3,7:10:35.81:283,0,36	0/0:6,0:6:12.84:0,13,190	0/0:6,0:6:18.06:0,18,251
chr10	46543606	.	AC	A	4571.59	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=12.058;DP=771;FS=0.771;HRun=1;HaplotypeScore=74.5934;InbreedingCoeff=0.9994;MQ=89.71;MQ0=0;MQRankSum=-2.130;QD=38.10;ReadPosRankSum=3.246;VQSLOD=5.4714;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:84.26:0,84,1310	0/0:9,0:9:27.09:0,27,431	0/0:32,0:32:94.79:0,95,1376	0/0:27,0:27:81.20:0,81,1154	0/0:31,0:31:90.29:0,90,1411	0/0:21,0:21:63.21:0,63,1007	0/0:29,0:29:87.27:0,87,1343	0/0:33,0:33:96.32:0,96,1513	0/0:37,0:37:99:0,111,1746	0/0:31,0:31:93.29:0,93,1423	0/0:18,0:18:51.16:0,51,791	0/0:45,0:45:99:0,132,2060	0/0:21,0:21:63.21:0,63,1007	0/0:24,0:24:72.25:0,72,1147	0/0:45,0:45:99:0,135,2057	0/0:48,0:48:99:0,144,2273	0/0:28,0:28:84.24:0,84,1286	0/0:14,0:14:42.13:0,42,644	1/1:0,12:12:36.12:504,36,0	1/1:0,33:33:96.23:1298,96,0	1/1:0,47:47:99:1846,132,0	0/0:25,0:25:75.24:0,75,1169	0/0:29,0:29:84.23:0,84,1291	0/0:21,0:21:63.21:0,63,1007	0/0:21,0:21:60.19:0,60,932	0/0:25,0:25:75.24:0,75,1174	1/1:0,28:28:66.22:923,66,0	0/0:9,0:9:27.09:0,27,426
chr10	46545073	.	TACA	T	469.37	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=3.417;DP=280;FS=6.474;HRun=0;HaplotypeScore=49.9623;InbreedingCoeff=0.8017;MQ=111.30;MQ0=0;MQRankSum=-2.481;QD=26.08;ReadPosRankSum=0.839;VQSLOD=2.8114;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:18.06:0,18,374	1/1:0,3:3:9.03:143,9,0	0/0:19,0:19:57.14:0,57,1120	0/0:24,0:24:62.91:0,63,1209	0/0:14,0:14:39.13:0,39,838	0/0:10,0:10:27.09:0,27,590	0/0:13,0:12:33.09:0,33,643	0/0:17,0:17:39.13:0,39,852	0/0:9,0:9:9.03:0,9,197	0/0:5,0:5:15.05:0,15,327	0/0:5,0:5:15.05:0,15,326	0/0:6,0:6:15:0,15,240	0/0:8,0:8:21.07:0,21,455	0/0:6,0:6:18.06:0,18,378	1/1:2,13:15:32.98:440,33,0	0/0:6,0:6:18.06:0,18,393	0/0:13,0:13:36.12:0,36,784	0/0:6,0:6:18.06:0,18,393	0/0:11,0:11:21.07:0,21,433	0/0:7,0:7:21.07:0,21,455	0/0:13,0:13:15.05:0,15,325	0/0:9,0:9:27.08:0,27,550	0/0:9,0:9:20.78:0,21,457	0/0:11,0:11:30.10:0,30,655	0/0:4,0:4:12.04:0,12,262	0/0:8,0:8:24.08:0,24,486	0/0:1,0:1:3.01:0,3,66	0/0:13,0:13:33.08:0,33,635
chr10	46545131	.	GCGCACA	G	3148.60	PASS	AB=0.904;AC=31;AF=0.574;AN=54;BaseQRankSum=8.122;DP=409;FS=10.394;HRun=0;HaplotypeScore=103.7135;InbreedingCoeff=0.0925;MQ=61.73;MQ0=24;MQRankSum=-5.628;QD=11.66;ReadPosRankSum=5.707;VQSLOD=1.2503;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,23:26:15.94:345,16,0	./.	0/0:41,0:16:34.83:0,35,295	0/0:33,0:20:44.89:0,45,398	0/1:10,0:10:34.89:35,0,65	0/0:13,0:13:23.75:0,24,425	0/0:18,0:18:32.88:0,33,264	0/0:27,0:27:76.56:0,77,551	1/1:1,15:18:15.05:362,15,0	0/1:12,0:12:74:86,0,74	1/1:8,0:7:3:29,3,0	1/1:0,7:8:6.02:126,6,0	1/1:9,3:12:11.15:342,11,0	0/1:7,0:6:4.99:91,0,5	1/1:6,0:9:12.03:174,12,0	0/1:9,0:9:5.02:82,0,5	0/1:15,0:15:32.73:33,0,41	0/0:6,0:6:0.04:0,0,55	1/1:11,0:10:23.88:201,24,0	1/1:0,0:11:14.43:110,14,0	1/1:2,1:17:2.88:15,3,0	1/1:0,7:8:12.04:270,12,0	0/1:2,10:13:6.89:185,0,7	0/1:17,3:20:56.05:359,0,56	0/1:14,0:14:71.92:152,0,72	0/1:16,0:16:91.50:144,0,92	0/1:2,1:19:48.85:167,0,49	0/1:5,0:4:19.24:19,0,39
chr10	46545133	.	GCACACACA	G	2891.39	PASS	AB=1.000;AC=31;AF=0.620;AN=50;BaseQRankSum=2.214;DP=414;FS=5.638;HRun=0;HaplotypeScore=114.6487;InbreedingCoeff=0.3162;MQ=59.72;MQ0=24;MQRankSum=-4.725;QD=13.14;ReadPosRankSum=2.057;VQSLOD=1.9833;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:29:32.48:79,0,32	./.	./.	0/0:30,0:17:2.29:0,2,6	1/1:5,5:10:6.02:151,6,0	0/0:11,0:17:14.84:0,15,430	0/0:14,0:22:6:0,6,66	0/0:26,0:26:2.98:0,3,22	1/1:17,0:17:12.35:44,12,0	1/1:5,6:12:21.07:409,21,0	1/1:2,4:6:3.01:75,3,0	1/1:8,0:8:5.34:78,5,0	0/1:12,0:12:37:37,0,43	1/1:2,5:7:12.04:282,12,0	1/1:9,0:9:9.03:167,9,0	1/1:1,6:8:11.77:281,12,0	1/1:9,4:14:6.02:131,6,0	./.	0/0:13,0:11:6.02:0,6,93	0/1:11,0:11:52.64:53,0,126	0/0:20,0:19:6.02:0,6,87	1/1:8,0:8:10.70:98,11,0	0/1:12,0:12:58.44:77,0,58	0/1:20,0:20:55.20:55,0,233	1/1:6,6:14:17.95:373,18,0	1/1:6,9:15:27.07:590,27,0	0/0:19,0:18:10.05:0,10,298	1/1:3,3:5:3.01:75,3,0
chr10	46546030	.	G	GA	2552.63	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-10.755;DP=755;FS=0.859;HRun=9;HaplotypeScore=77.7205;InbreedingCoeff=0.9968;MQ=64.73;MQ0=0;MQRankSum=-0.069;QD=24.31;ReadPosRankSum=1.103;VQSLOD=4.3506;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:56:99:0,147,1266	0/0:9,0:9:26.99:0,27,234	0/0:14,0:13:18.14:0,18,213	0/0:27,0:28:35.96:0,36,385	0/0:30,1:31:50.81:0,51,670	0/0:31,0:31:89.97:0,90,781	0/0:23,0:23:59.96:0,60,517	0/0:33,0:33:80.97:0,81,701	0/0:22,0:22:59.99:0,60,521	0/0:37,0:37:99:0,102,883	0/0:22,0:23:59.02:0,59,501	0/0:24,0:25:59.01:0,59,501	0/0:24,0:24:62.99:0,63,547	0/0:30,0:30:80.98:0,81,703	0/0:31,0:31:86.96:0,87,752	0/0:31,0:31:77.97:0,78,677	0/0:23,0:24:67.98:0,68,572	0/0:19,0:18:33.98:0,34,422	1/1:3,8:11:27.07:297,27,0	1/1:4,23:27:46.10:724,46,0	1/1:6,33:39:93.25:1029,93,0	0/0:26,2:28:29.77:0,30,483	0/0:29,0:29:49.23:0,49,622	0/0:25,1:26:38.80:0,39,566	0/0:26,0:26:65.97:0,66,573	0/0:35,0:35:89.97:0,90,779	1/1:2,26:28:60.16:664,60,0	0/0:14,0:14:29.96:0,30,257
chr10	46546845	.	C	CCA	1417.03	PASS	AB=0.917;AC=32;AF=0.640;AN=50;BaseQRankSum=-2.692;DP=558;FS=15.996;HRun=0;HaplotypeScore=80.7216;InbreedingCoeff=0.1445;MQ=60.26;MQ0=23;MQRankSum=-0.459;QD=3.73;ReadPosRankSum=1.144;VQSLOD=1.0056;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:38,2:39:8.75:146,0,9	1/1:7,0:7:1.82:5,2,0	./.	./.	1/1:18,0:18:3.01:43,3,0	0/0:18,0:18:11.71:0,12,100	0/0:29,0:29:4.92:0,5,61	./.	0/1:13,0:12:33.32:33,0,46	1/1:17,0:16:9.03:124,9,0	0/0:12,0:12:3.01:0,3,31	0/1:18,0:18:18.22:92,0,18	1/1:17,3:20:6.02:83,6,0	0/0:12,0:13:5.73:0,6,39	0/1:17,0:17:0:0,0,0	1/1:15,5:21:6.02:87,6,0	0/1:16,4:19:34.33:34,0,42	0/1:16,2:24:9.49:101,0,9	1/1:10,0:10:3.01:40,3,0	1/1:4,0:4:2.77:25,3,0	1/1:26,0:24:12.02:132,12,0	0/0:18,0:17:3:0,3,31	1/1:17,3:19:6.02:87,6,0	0/1:33,5:38:58.41:150,0,58	0/1:17,0:16:0:0,0,0	1/1:18,0:18:2.92:17,3,0	1/1:19,0:19:26.89:262,27,0	1/1:4,2:5:8.96:99,9,0
chr10	46547448	.	TAAACA	T	8905.92	PASS	AB=1.000;AC=53;AF=0.981;AN=54;DP=691;FS=0.000;HRun=0;HaplotypeScore=154.1043;InbreedingCoeff=0.2396;MQ=71.28;MQ0=0;QD=13.43;VQSLOD=4.1026;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,0:29:21.06:244,21,0	1/1:5,8:13:21.07:370,21,0	./.	0/1:25,0:21:0:0,0,0	1/1:16,19:35:51.13:844,51,0	1/1:10,0:24:32.29:332,32,0	1/1:17,0:26:18.05:209,18,0	1/1:29,0:29:3.01:51,3,0	1/1:7,0:18:20.93:244,21,0	1/1:15,10:25:30.10:532,30,0	1/1:15,12:27:33.11:582,33,0	1/1:11,0:27:36.10:412,36,0	1/1:20,0:27:18.05:209,18,0	1/1:18,11:29:24.08:428,24,0	1/1:10,14:24:33.11:588,33,0	1/1:17,11:28:20.43:329,20,0	1/1:21,21:42:42.14:749,42,0	1/1:13,10:23:15.05:267,15,0	1/1:14,0:17:6.02:70,6,0	1/1:10,0:24:31.15:326,31,0	1/1:8,0:9:3.01:35,3,0	1/1:17,0:25:18.05:206,18,0	1/1:12,0:21:20.80:219,21,0	1/1:13,0:24:6.02:70,6,0	1/1:16,9:25:21.07:356,21,0	1/1:14,17:32:51.14:809,51,0	1/1:8,0:22:8.85:104,9,0	1/1:6,7:13:18.06:321,18,0
chr10	46547776	.	TC	T	1766.19	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.187;DP=713;FS=0.000;HRun=1;HaplotypeScore=78.7469;InbreedingCoeff=0.9996;MQ=84.71;MQ0=0;MQRankSum=-1.339;QD=36.04;ReadPosRankSum=2.611;VQSLOD=3.8952;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:57:99:0,169,2645	1/1:0,14:14:36.12:503,36,0	0/0:29,0:29:86.09:0,86,1308	0/0:20,0:20:54.17:0,54,792	0/0:30,0:30:90.29:0,90,1415	0/0:15,0:15:42.14:0,42,672	0/0:23,0:23:66.23:0,66,1055	0/0:29,0:29:87.29:0,87,1365	0/0:28,0:28:84.27:0,84,1318	0/0:29,0:29:87.28:0,87,1349	0/0:24,0:24:72.25:0,72,1146	0/0:21,0:21:63.21:0,63,1007	0/0:23,0:23:69.23:0,69,1072	0/0:18,0:18:54.18:0,54,863	1/1:0,35:35:99:1385,99,0	0/0:26,0:26:78.25:0,78,1224	0/0:33,0:33:99:0,99,1578	0/0:39,0:39:99:0,117,1843	0/0:25,0:25:72.21:0,72,1115	0/0:25,0:25:72.25:0,72,1150	0/0:47,0:47:99:0,141,2181	0/0:17,0:17:48.16:0,48,764	0/0:15,0:15:42.14:0,42,671	0/0:19,0:19:54.18:0,54,863	0/0:16,0:16:48.14:0,48,736	0/0:28,0:28:84.29:0,84,1337	0/0:18,0:18:54.16:0,54,838	0/0:10,0:10:30.10:0,30,480
chr10	46549360	.	GT	G	9770.15	PASS	AB=0.749;AC=51;AF=0.911;AN=56;BaseQRankSum=-2.830;DP=648;FS=8.345;HRun=11;HaplotypeScore=86.2849;InbreedingCoeff=0.2445;MQ=73.91;MQ0=0;MQRankSum=-2.675;QD=15.17;ReadPosRankSum=4.100;VQSLOD=5.1207;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,25:28:71.88:591,72,0	1/1:3,11:14:29.96:246,30,0	0/1:19,0:19:12.70:13,0,145	0/0:3,1:4:3:0,3,29	1/1:2,23:25:45.45:454,45,0	1/1:1,26:27:68.92:566,69,0	1/1:2,19:21:38.78:320,39,0	1/1:5,19:25:30.78:442,31,0	1/1:4,25:29:71.90:591,72,0	1/1:4,24:28:39.89:532,40,0	1/1:1,11:12:32.96:271,33,0	0/1:5,13:18:12.05:275,0,12	0/1:4,4:8:16.96:84,0,17	1/1:6,30:36:44.04:622,44,0	1/1:1,33:34:89.88:739,90,0	1/1:3,20:24:55.91:449,56,0	1/1:6,19:25:50.90:419,51,0	1/1:6,19:25:21.93:381,22,0	1/1:7,0:24:32.58:94,33,0	1/1:2,0:31:59.07:171,59,0	1/1:1,0:29:54.99:159,55,0	1/1:5,18:23:35.90:296,36,0	1/1:3,17:20:38.66:320,39,0	1/1:3,19:23:55.96:449,56,0	1/1:2,18:20:47.94:394,48,0	1/1:6,24:31:73.92:597,74,0	1/1:4,0:31:50.91:147,51,0	1/1:4,10:14:17.96:148,18,0
chr10	46552087	.	GA	G	919.59	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=1.110;DP=603;FS=0.000;HRun=2;HaplotypeScore=74.0266;InbreedingCoeff=0.9975;MQ=80.53;MQ0=0;MQRankSum=-1.613;QD=32.84;ReadPosRankSum=1.777;VQSLOD=3.5483;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:72.19:0,72,1099	1/1:0,7:7:21.07:285,21,0	0/0:16,0:16:45.15:0,45,712	0/0:17,0:17:46.67:0,47,657	0/0:34,0:34:99:0,102,1604	0/0:21,0:21:63.18:0,63,956	0/0:16,0:16:48.16:0,48,767	0/0:29,0:29:87.29:0,87,1370	0/0:16,0:16:48.16:0,48,764	0/0:21,0:21:60.20:0,60,941	0/0:34,0:34:99:0,102,1585	0/0:22,0:22:66.22:0,66,1045	0/0:16,0:16:48.16:0,48,765	0/0:22,0:22:63.21:0,63,1007	1/1:0,21:21:54.18:755,54,0	0/0:26,0:26:78.24:0,78,1197	0/0:25,0:25:75.26:0,75,1196	0/0:13,0:13:39.13:0,39,622	0/0:18,0:18:51.15:0,51,771	0/0:20,0:20:60.19:0,60,936	0/0:11,0:11:33.11:0,33,528	0/0:26,0:26:78.27:0,78,1244	0/0:22,0:22:66.21:0,66,1028	0/0:23,0:23:66.23:0,66,1055	0/0:34,0:34:99:0,102,1603	0/0:30,0:30:90.29:0,90,1396	0/0:29,0:29:87.26:0,87,1330	0/0:10,0:10:30.10:0,30,480
chr10	46552484	.	T	TA	543.35	PASS	AB=1.000;AC=6;AF=0.107;AN=56;BaseQRankSum=-3.064;DP=470;FS=17.740;HRun=8;HaplotypeScore=50.8238;InbreedingCoeff=0.6571;MQ=72.60;MQ0=1;MQRankSum=0.438;QD=12.94;ReadPosRankSum=-1.183;VQSLOD=1.1992;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:42.02:0,42,384	1/1:0,9:9:27.08:312,27,0	0/1:11,0:9:30:48,0,30	0/1:11,0:8:2.83:3,0,21	0/0:35,0:35:99:0,99,901	0/0:18,0:17:48.03:0,48,439	0/0:5,0:5:15.01:0,15,137	0/0:19,0:19:47.99:0,48,429	0/0:10,0:10:30.02:0,30,275	0/0:31,0:31:80.97:0,81,726	0/0:22,0:22:60.01:0,60,542	0/0:16,0:16:48.03:0,48,439	0/0:15,0:15:36.01:0,36,329	0/0:8,0:8:23.99:0,24,214	1/1:1,10:11:27.08:312,27,0	0/0:13,0:13:39.02:0,39,357	0/0:25,0:25:65.99:0,66,593	0/0:24,0:24:58.01:0,58,554	0/0:25,0:25:65.52:0,66,582	0/0:23,0:23:57.02:0,57,522	0/0:10,0:10:21.01:0,21,192	0/0:5,0:5:12:0,12,110	0/0:12,0:12:21.01:0,21,192	0/0:9,0:9:21:0,21,192	0/0:17,0:17:39.02:0,39,357	0/0:23,0:23:57.02:0,57,522	0/0:34,0:34:90.04:0,90,820	0/0:11,0:11:27.01:0,27,247
chr10	46554120	.	TACACACACACACACACAC	T	3650.60	PASS	AB=0.796;AC=20;AF=0.357;AN=56;BaseQRankSum=4.388;DP=504;FS=14.240;HRun=0;HaplotypeScore=225.6748;InbreedingCoeff=0.3999;MQ=59.33;MQ0=12;MQRankSum=-3.400;QD=15.53;ReadPosRankSum=-0.537;VQSLOD=0.9662;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:28:36.48:36,0,86	0/0:2,0:5:12.04:0,12,344	0/0:25,0:11:3.01:0,3,46	0/0:21,0:16:6.02:0,6,116	0/0:17,8:24:3.01:0,3,44	0/0:10,0:17:12.04:0,12,295	0/0:21,0:21:18.01:0,18,359	1/1:25,0:24:1.55:4,2,0	0/1:7,0:8:0.13:0,0,42	1/1:17,7:24:21.03:587,21,0	1/1:14,6:21:2.74:69,3,0	0/0:12,0:19:4.06:0,4,93	0/0:14,0:16:21.07:0,21,624	1/1:8,11:19:12.04:582,12,0	0/0:12,0:16:12.04:0,12,357	1/1:15,6:21:18.06:825,18,0	0/1:6,2:8:99:139,0,136	0/1:14,4:17:99:135,0,128	0/0:18,0:18:11.47:0,11,391	0/0:14,0:14:18.06:0,18,1131	0/0:19,0:21:12.51:0,13,518	0/0:7,0:11:8.99:0,9,120	0/1:4,0:11:0:0,0,0	0/0:18,0:25:5.40:0,5,69	1/1:9,9:18:12.04:292,12,0	0/1:15,7:23:49.32:690,0,49	0/0:6,0:10:18.06:0,18,1006	1/1:8,2:10:6.02:291,6,0
chr10	46554788	.	C	CAAAAA	6357.79	PASS	AB=0.895;AC=44;AF=0.786;AN=56;BaseQRankSum=0.647;DP=492;FS=5.006;HRun=15;HaplotypeScore=128.8385;InbreedingCoeff=0.6508;MQ=50.72;MQ0=14;MQRankSum=-6.304;QD=15.25;ReadPosRankSum=-1.880;VQSLOD=1.7447;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:20,5:23:15.05:298,15,0	0/0:9,0:9:17.86:0,18,150	0/1:28,0:11:18.80:19,0,24	0/0:18,0:9:6.70:0,7,87	1/1:21,3:25:33.40:469,33,0	0/0:15,0:18:37.68:0,38,462	0/0:11,0:12:26.89:0,27,346	1/1:21,0:27:30.33:401,30,0	1/1:7,0:11:8.39:96,8,0	1/1:13,6:21:32.94:616,33,0	0/1:11,1:15:6.80:335,0,7	1/1:15,0:14:21:275,21,0	1/1:5,0:5:3:30,3,0	1/1:11,1:15:8.70:119,9,0	0/0:16,0:17:32.30:0,32,263	1/1:12,2:14:15.05:312,15,0	1/1:16,5:23:33.04:655,33,0	1/1:17,6:22:18.02:322,18,0	1/1:28,0:23:5.64:171,6,0	1/1:27,0:27:41.76:578,42,0	1/1:7,0:6:6.47:75,6,0	1/1:9,1:11:12.04:233,12,0	1/1:7,0:11:9.02:99,9,0	1/1:6,2:9:0.14:0,0,0	1/1:16,1:17:21.05:332,21,0	1/1:14,1:19:21.04:361,21,0	1/1:20,0:20:32.54:326,33,0	1/1:9,2:10:12.04:237,12,0
chr10	46554793	.	A	AAC	612.35	PASS	AB=0.956;AC=7;AF=0.125;AN=56;BaseQRankSum=5.157;DP=496;FS=29.098;HRun=0;HaplotypeScore=105.5758;InbreedingCoeff=0.4243;MQ=54.24;MQ0=14;MQRankSum=-3.299;QD=5.95;ReadPosRankSum=2.998;VQSLOD=1.5910;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:24:19.49:0,19,218	0/0:8,0:8:21.03:0,21,234	0/0:33,0:15:27.62:0,28,203	0/1:23,0:10:11.16:11,0,95	0/0:29,0:28:16.16:0,16,256	0/0:18,0:18:50.84:0,51,604	0/0:12,0:12:32.93:0,33,418	0/0:28,0:27:36.90:0,37,346	0/0:9,0:9:14.62:0,15,97	0/0:20,0:20:18.94:0,19,216	0/0:13,0:13:5.95:0,6,112	0/0:15,0:14:7.57:0,8,164	0/0:5,0:5:11.88:0,12,85	0/0:14,0:14:10.23:0,10,150	0/0:17,0:17:35.96:0,36,420	0/0:15,0:14:26.44:0,26,169	0/0:24,0:24:10.66:0,11,184	0/0:24,0:22:37.63:0,38,263	0/1:28,1:24:8.72:281,0,9	1/1:19,6:25:22.78:282,23,0	1/1:7,1:7:3.80:34,4,0	0/0:10,0:10:20.94:0,21,161	0/0:13,0:12:22.73:0,23,156	0/0:9,0:9:6.85:0,7,48	0/0:18,0:17:25.87:0,26,192	0/0:19,0:18:44.10:0,44,289	0/1:16,2:18:8.14:135,0,8	0/0:13,0:11:21.72:0,22,149
chr10	46554801	.	AAAC	A	795.20	PASS	AB=0.656;AC=5;AF=0.089;AN=56;BaseQRankSum=5.677;DP=512;FS=9.660;HRun=0;HaplotypeScore=113.1502;InbreedingCoeff=0.2063;MQ=60.53;MQ0=11;MQRankSum=0.216;QD=9.70;ReadPosRankSum=3.721;VQSLOD=2.2401;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:27:62.69:0,63,576	0/0:7,0:7:1.80:0,2,18	0/0:37,0:18:4.38:0,4,431	0/0:27,0:14:24.16:0,24,331	0/0:30,0:29:64.45:0,64,728	0/0:17,0:17:45.14:0,45,816	0/0:14,0:14:39.06:0,39,609	0/0:28,0:27:69.08:0,69,818	0/0:10,0:10:20.94:0,21,190	0/0:20,0:20:54.16:0,54,765	0/0:12,0:12:30.55:0,31,428	0/0:13,0:12:32.50:0,33,353	0/0:7,0:7:21.02:0,21,243	0/0:15,0:15:33.06:0,33,397	0/0:14,0:14:20.74:0,21,104	0/0:17,0:16:45.09:0,45,600	0/0:28,0:28:65.90:0,66,761	0/0:21,0:20:41.41:0,41,484	0/1:18,11:25:99:214,0,245	0/1:12,14:26:99:333,0,153	1/1:1,7:8:5.89:58,6,0	0/0:12,0:12:35.86:0,36,405	0/0:16,0:15:29.17:0,29,367	0/0:10,0:10:8.76:0,9,107	0/0:17,0:16:45:0,45,507	0/0:17,0:16:46.92:0,47,652	0/1:6,13:19:65.94:304,0,66	0/0:11,0:11:30.08:0,30,378
chr10	46554803	.	AC	A	892.21	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=6.808;DP=413;FS=12.595;HRun=4;HaplotypeScore=88.7202;InbreedingCoeff=0.8730;MQ=68.23;MQ0=11;MQRankSum=-2.876;QD=10.75;ReadPosRankSum=4.988;VQSLOD=0.6000;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:20:34.97:0,35,258	1/1:2,5:7:14.97:154,15,0	0/0:37,1:19:1.38:0,1,248	0/0:28,0:15:30.92:0,31,290	0/0:26,0:25:53.69:0,54,453	0/0:15,0:15:37.61:0,38,388	0/0:16,0:16:38.36:0,38,356	0/0:18,0:18:38.09:0,38,318	0/0:8,0:8:5.99:0,6,48	0/0:14,0:14:33.01:0,33,304	0/0:11,0:11:23.93:0,24,201	0/0:11,0:10:26.98:0,27,201	0/0:3,0:3:8.99:0,9,80	0/0:9,0:9:12.89:0,13,102	1/1:2,12:14:24.06:282,24,0	0/0:9,0:8:23.96:0,24,202	0/0:24,0:24:56.65:0,57,416	0/0:17,0:16:29.72:0,30,249	1/1:17,0:14:31.44:210,31,0	1/1:20,0:20:45.76:237,46,0	1/1:8,0:8:5.44:27,5,0	0/0:6,0:6:11.97:0,12,113	0/0:13,0:12:22.94:0,23,194	0/0:9,0:9:11.56:0,12,103	0/0:11,0:11:20.91:0,21,162	0/0:13,0:12:33:0,33,298	1/1:17,0:17:28.18:162,28,0	0/0:6,0:6:12.36:0,12,94
chr10	46554804	.	C	CAAAAAACAAAAAA	4655.37	PASS	AB=0.985;AC=13;AF=0.232;AN=56;BaseQRankSum=2.926;DP=420;FS=8.227;HRun=0;HaplotypeScore=170.3834;InbreedingCoeff=0.2232;MQ=71.39;MQ0=10;MQRankSum=-6.266;QD=29.46;ReadPosRankSum=0.260;VQSLOD=3.0475;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:20:43.32:43,0,248	0/0:7,0:7:12.33:0,12,311	0/0:40,0:21:26.88:0,27,520	0/0:29,0:16:39.17:0,39,423	0/1:25,0:25:23.43:23,0,424	0/0:15,0:15:42.11:0,42,1256	0/0:16,0:16:45.02:0,45,871	0/1:19,0:18:8.01:8,0,474	0/0:8,0:8:8.18:0,8,57	0/0:14,0:14:8.90:0,9,326	0/1:11,0:11:45.05:45,0,215	0/0:11,0:10:16.27:0,16,225	0/0:3,0:3:5.53:0,6,90	0/0:9,0:9:2.93:0,3,158	0/0:17,0:17:28.44:0,28,396	0/0:10,0:9:20.74:0,21,240	0/0:24,0:24:24.59:0,25,441	0/0:17,0:16:10.61:0,11,335	0/1:15,1:14:35.60:930,0,36	1/1:14,6:20:51.04:1999,51,0	1/1:7,1:8:9.03:346,9,0	0/1:6,0:6:24.98:25,0,147	0/0:13,0:12:23.73:0,24,374	0/0:9,0:9:11.87:0,12,159	0/1:14,0:13:60.94:61,0,204	0/0:14,0:13:11.02:0,11,367	1/1:13,2:15:31.05:1174,31,0	0/0:6,0:6:14.82:0,15,191
chr10	46555515	.	CT	C	3140.69	PASS	AB=0.516;AC=7;AF=0.125;AN=56;BaseQRankSum=6.829;DP=588;FS=8.444;HRun=1;HaplotypeScore=60.3055;InbreedingCoeff=0.8076;MQ=53.60;MQ0=15;MQRankSum=0.607;QD=33.77;ReadPosRankSum=1.028;VQSLOD=2.7539;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:33:72.23:0,72,1114	0/0:12,0:12:36.12:0,36,575	0/0:4,0:2:3.01:0,3,48	0/0:8,0:5:15.05:0,15,233	0/0:23,0:22:57.19:0,57,909	0/0:16,0:16:42.14:0,42,671	0/0:25,0:22:60.19:0,60,922	0/0:14,0:13:39.13:0,39,616	0/0:20,0:20:57.19:0,57,886	0/0:27,0:24:72.23:0,72,1078	0/0:20,0:20:48.16:0,48,767	0/0:22,0:21:60.20:0,60,959	0/0:28,0:27:72.23:0,72,1119	0/0:23,0:23:69.23:0,69,1090	0/0:19,0:17:48.15:0,48,743	0/0:19,0:19:51.16:0,51,792	0/0:37,0:32:81.27:0,81,1280	0/0:26,0:26:78.27:0,78,1246	1/1:0,20:20:60.18:820,60,0	0/1:1,15:16:5.77:498,0,6	1/1:1,33:32:87.29:1216,87,0	0/0:25,0:25:66.22:0,66,1047	0/0:17,0:14:39.12:0,39,600	0/0:28,0:26:69.23:0,69,1087	0/0:16,0:16:48.16:0,48,767	0/0:25,0:24:69.20:0,69,1076	1/1:1,22:22:54.18:755,54,0	0/0:5,0:4:8.56:0,9,143
chr10	46556001	.	TG	T	9441.84	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=19.777;DP=732;FS=0.895;HRun=2;HaplotypeScore=95.0317;InbreedingCoeff=0.9991;MQ=80.54;MQ0=0;MQRankSum=-0.434;QD=33.84;ReadPosRankSum=3.299;VQSLOD=4.9671;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,126,1861	0/0:8,0:8:24.07:0,24,341	0/0:23,0:23:59.97:0,60,820	0/0:15,0:15:41.92:0,42,562	1/1:0,23:23:69.17:829,69,0	0/0:21,0:21:63.20:0,63,923	0/0:30,0:30:87.29:0,87,1304	1/1:1,32:33:93.28:1139,93,0	0/0:28,0:28:84.26:0,84,1218	1/1:0,25:25:72.19:865,72,0	1/1:2,23:25:66.21:818,66,0	0/0:31,0:31:87.29:0,87,1302	0/0:25,0:25:66.18:0,66,944	1/1:1,27:28:30.28:847,30,0	0/0:31,0:31:90.30:0,90,1347	1/1:0,24:24:69.22:855,69,0	1/1:1,20:21:60.19:741,60,0	1/1:1,29:30:78.25:967,78,0	0/0:24,0:24:72.21:0,72,1034	0/0:24,0:24:72.19:0,72,1032	0/0:43,0:43:99:0,126,1861	0/0:20,0:20:54.16:0,54,769	0/0:31,0:31:93.28:0,93,1348	0/0:28,0:28:78.26:0,78,1167	1/1:0,31:31:90.28:1117,90,0	1/1:0,27:27:81.25:1003,81,0	0/0:28,0:28:84.26:0,84,1235	1/1:0,12:12:21.07:260,21,0
chr10	46558190	.	GT	G	723.32	PASS	AB=0.735;AC=7;AF=0.125;AN=56;BaseQRankSum=7.630;DP=487;FS=3.617;HRun=1;HaplotypeScore=59.6859;InbreedingCoeff=0.1404;MQ=81.15;MQ0=0;MQRankSum=-3.896;QD=8.71;ReadPosRankSum=-0.440;VQSLOD=0.7915;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:60.19:0,60,935	1/1:1,2:3:6.02:84,6,0	0/0:17,0:17:48.13:0,48,664	0/1:17,1:18:5.56:6,0,499	0/0:17,0:17:51.17:0,51,815	0/0:19,0:19:51.11:0,51,784	0/0:14,0:14:42.13:0,42,642	0/0:26,0:26:78.19:0,78,1190	0/0:22,0:22:63.19:0,63,952	0/0:23,0:23:69.18:0,69,1014	0/0:9,0:9:27.08:0,27,409	0/0:21,0:21:63.21:0,63,998	0/0:15,0:15:39.12:0,39,599	0/0:20,0:20:60.19:0,60,915	0/1:6,6:12:90.43:122,0,90	0/0:23,0:23:69.20:0,69,1047	0/0:21,0:21:63.21:0,63,994	0/0:16,0:16:48.16:0,48,760	0/1:5,4:9:99:141,0,208	0/0:12,0:12:17.06:0,17,196	0/1:14,6:20:81.34:81,0,405	0/0:30,0:30:84.06:0,84,1268	0/0:9,0:9:20.86:0,21,309	0/0:22,0:22:63.20:0,63,970	0/0:22,0:22:60.18:0,60,930	0/0:17,0:17:48.16:0,48,767	0/1:7,14:21:99:416,0,272	0/0:9,0:9:27.01:0,27,388
chr10	46558193	.	G	GGAGGGAGGAGTGGGGGCAGGA	4697.57	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=6.678;DP=494;FS=1.111;HRun=0;HaplotypeScore=266.5354;InbreedingCoeff=0.8060;MQ=80.95;MQ0=0;MQRankSum=-4.796;QD=54.00;ReadPosRankSum=-4.177;VQSLOD=3.5815;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:51.17:0,51,1942	1/1:3,0:3:5.88:55,6,0	0/0:17,0:17:0.80:0,1,680	0/0:17,0:18:29.60:0,30,714	0/0:18,0:18:48.16:0,48,2162	0/0:20,0:20:48.16:0,48,1953	0/0:15,0:15:30.09:0,30,970	0/0:27,0:27:72.22:0,72,1838	0/0:21,0:21:57.18:0,57,2147	0/0:22,0:22:60.21:0,60,2544	0/0:8,0:8:24.08:0,24,1135	0/0:21,0:21:57.20:0,57,2480	0/0:13,0:13:36.11:0,36,1362	0/0:19,0:19:54.19:0,54,2463	0/1:12,0:12:32.62:688,0,33	0/0:23,0:23:60.21:0,60,2315	0/0:21,0:21:51.18:0,51,2397	0/0:17,0:17:48.13:0,48,2142	1/1:12,0:12:33.10:1225,33,0	1/1:4,4:18:30.05:757,30,0	1/1:20,0:19:12:337,12,0	0/0:27,0:27:69.22:0,69,2791	0/0:10,0:10:20.26:0,20,894	0/0:21,0:21:54:0,54,2068	0/0:22,0:22:57.18:0,57,2300	0/0:18,0:18:39.13:0,39,1721	1/1:22,0:22:57.12:1635,57,0	0/0:8,0:8:24.08:0,24,1043
chr10	46559088	.	G	GGAGA	2260.59	PASS	AB=1.000;AC=39;AF=0.848;AN=46;BaseQRankSum=-0.323;DP=400;FS=4.725;HRun=0;HaplotypeScore=100.8767;InbreedingCoeff=0.0830;MQ=70.08;MQ0=1;MQRankSum=-1.090;QD=6.75;ReadPosRankSum=-0.363;VQSLOD=1.6022;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:20:6.30:81,6,0	0/0:3,0:3:2.98:0,3,21	./.	./.	1/1:16,0:16:6.02:130,6,0	0/1:20,0:20:4.95:201,0,5	1/1:7,6:13:2.85:70,3,0	1/1:30,0:29:11.49:120,11,0	1/1:16,0:16:3.01:51,3,0	1/1:16,0:16:21.04:251,21,0	1/1:8,0:8:5.99:87,6,0	1/1:8,0:8:3.01:52,3,0	1/1:12,0:12:5.97:73,6,0	1/1:15,0:15:6.01:91,6,0	0/1:12,0:12:1.88:2,0,40	1/1:8,0:8:8.99:75,9,0	1/1:12,0:18:6.02:107,6,0	1/1:13,0:12:6.96:70,7,0	0/1:11,0:11:0:0,0,0	0/1:17,0:17:31.66:70,0,32	0/1:18,0:18:30.21:30,0,48	1/1:8,0:8:3:25,3,0	./.	./.	1/1:11,0:11:12.04:243,12,0	1/1:23,0:23:19.88:351,20,0	1/1:22,0:21:8.17:195,8,0	./.
chr10	46559132	.	A	AGC	117.86	PASS	AB=0.956;AC=12;AF=0.214;AN=56;BaseQRankSum=4.943;DP=447;FS=5.298;HRun=0;HaplotypeScore=92.3552;InbreedingCoeff=-0.0464;MQ=62.24;MQ0=8;MQRankSum=-0.268;QD=0.79;ReadPosRankSum=-0.692;VQSLOD=1.4495;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:19.50:0,19,128	0/1:3,0:3:7:16,0,7	0/0:16,0:11:32.88:0,33,306	0/0:28,0:17:44.89:0,45,442	0/1:12,0:12:14.19:14,0,80	0/1:20,0:20:8.66:9,0,224	0/0:18,0:18:2.41:0,2,172	0/0:31,0:30:70.47:0,70,576	0/0:17,0:17:17.78:0,18,127	0/0:14,0:12:22.68:0,23,160	0/1:13,0:13:14.23:14,0,79	0/1:11,0:11:2.76:3,0,20	1/1:13,0:13:2.16:8,2,0	0/0:22,0:22:20.53:0,21,257	0/1:3,11:14:3.73:106,0,4	0/0:15,0:14:21.22:0,21,161	0/0:20,0:20:22.65:0,23,183	0/0:18,0:17:31.67:0,32,242	0/0:8,0:8:20.65:0,21,135	0/1:15,0:15:6.39:6,0,92	0/0:22,0:22:6.57:0,7,166	0/0:10,0:10:5.46:0,5,39	0/0:11,0:11:5.53:0,6,30	0/0:18,0:18:16.97:0,17,107	0/1:10,0:10:11.28:52,0,11	0/1:18,0:18:18.63:19,0,208	0/1:21,0:21:7.07:7,0,147	0/0:10,0:7:20.95:0,21,169
chr10	46559146	.	T	TCA	2356.39	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=1.656;DP=364;FS=28.970;HRun=0;HaplotypeScore=60.3774;InbreedingCoeff=0.9179;MQ=90.55;MQ0=1;MQRankSum=-5.730;QD=35.17;ReadPosRankSum=0.983;VQSLOD=2.6039;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:30.10:0,30,406	0/0:7,0:7:18.03:0,18,223	0/0:26,0:23:57.18:0,57,757	0/0:33,0:24:60.15:0,60,766	0/0:6,0:6:6.02:0,6,81	0/0:17,0:17:42.09:0,42,518	0/0:13,0:13:30.10:0,30,405	0/0:26,0:26:63.19:0,63,824	0/0:7,0:7:18.06:0,18,244	0/0:10,0:9:24.08:0,24,325	0/0:7,0:7:18.06:0,18,244	0/0:10,0:10:15.05:0,15,203	0/0:9,0:9:11.90:0,12,162	0/0:12,0:12:36.12:0,36,486	0/0:15,0:15:17.80:0,18,228	0/0:12,0:12:33.11:0,33,446	0/0:11,0:11:18.06:0,18,243	0/0:13,0:13:33.11:0,33,446	1/1:0,12:12:36.12:630,36,0	1/1:2,10:13:21.07:368,21,0	1/1:3,17:20:35.83:625,36,0	0/0:4,0:4:9.03:0,9,122	0/0:7,0:7:15.05:0,15,203	0/0:15,0:15:39.09:0,39,522	0/0:5,0:5:12.04:0,12,162	0/0:12,0:12:24.06:0,24,297	1/1:4,18:22:50.84:892,51,0	0/0:7,0:7:21.07:0,21,284
chr10	46560250	.	A	AT	1997.23	PASS	AB=0.950;AC=10;AF=0.179;AN=56;BaseQRankSum=-7.112;DP=569;FS=2.814;HRun=9;HaplotypeScore=54.6811;InbreedingCoeff=0.7367;MQ=67.99;MQ0=3;MQRankSum=-1.098;QD=17.07;ReadPosRankSum=-1.713;VQSLOD=3.3195;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:53,2:55:99:0,113,1185	0/0:4,0:4:12:0,12,104	0/1:11,0:11:8.17:8,0,112	0/0:8,0:6:14.96:0,15,124	0/0:26,0:27:58.99:0,59,497	0/0:21,0:21:29.25:0,29,358	0/0:26,0:26:50.95:0,51,442	0/0:18,1:19:11.79:0,12,323	0/0:19,0:20:10.89:0,11,311	0/0:26,0:26:47.95:0,48,411	0/0:22,0:22:47.95:0,48,412	0/0:18,0:19:42.55:0,43,344	0/0:12,0:12:32.97:0,33,282	0/0:21,0:21:53.95:0,54,461	0/1:8,1:9:12.19:12,0,135	0/0:21,0:21:47.96:0,48,413	0/0:29,1:30:48.02:0,48,637	0/0:14,0:14:38.97:0,39,333	1/1:9,17:25:9.22:469,9,0	1/1:1,21:23:63:676,63,0	1/1:3,17:20:39.11:431,39,0	0/0:13,0:13:32.72:0,33,268	0/0:15,0:15:26.98:0,27,234	0/0:27,0:27:62.97:0,63,543	0/0:19,0:19:50.98:0,51,441	0/0:21,0:21:59.96:0,60,514	1/1:6,22:27:51.14:564,51,0	0/0:10,0:11:27.28:0,27,218
chr10	46562377	.	G	GT	7381.17	PASS	AB=0.829;AC=48;AF=0.857;AN=56;BaseQRankSum=-0.877;DP=496;FS=6.567;HRun=10;HaplotypeScore=117.4769;InbreedingCoeff=0.4196;MQ=62.41;MQ0=4;MQRankSum=-5.599;QD=16.78;ReadPosRankSum=0.282;VQSLOD=4.1614;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,20:24:53.91:548,54,0	0/1:2,3:5:12.60:79,0,13	0/1:18,0:16:10.45:10,0,119	0/1:11,0:8:10.91:11,0,55	1/1:9,15:24:50.96:524,51,0	0/0:32,0:31:62.86:0,63,517	0/0:22,0:24:36.95:0,37,277	1/1:18,19:33:42.85:611,43,0	1/1:3,12:15:38.75:414,39,0	1/1:8,14:22:42.03:425,42,0	0/1:11,8:20:21.67:177,0,22	1/1:8,8:17:30.02:297,30,0	1/1:5,9:14:35.60:332,36,0	1/1:5,11:15:32.67:329,33,0	1/1:8,9:16:8.49:287,8,0	1/1:2,14:16:39.10:415,39,0	1/1:7,6:13:17.88:174,18,0	1/1:5,11:15:8.40:318,8,0	1/1:8,1:14:30.09:159,30,0	1/1:11,0:18:40.18:225,40,0	1/1:6,0:9:12.36:55,12,0	1/1:6,4:10:13.59:132,14,0	1/1:9,11:21:26.25:453,26,0	1/1:2,6:7:18.05:192,18,0	1/1:3,7:9:21.05:223,21,0	1/1:8,17:25:60.04:617,60,0	1/1:14,0:23:31.54:168,32,0	1/1:4,6:10:20.88:203,21,0
chr10	46562398	.	TTTG	T	3210.16	PASS	AB=1.000;AC=45;AF=0.804;AN=56;BaseQRankSum=-3.724;DP=484;FS=11.538;HRun=0;HaplotypeScore=131.9034;InbreedingCoeff=0.5436;MQ=48.24;MQ0=11;MQRankSum=-0.635;QD=7.81;ReadPosRankSum=-0.811;VQSLOD=2.1957;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:23,1:22:34.01:151,34,0	1/1:5,0:5:10.77:70,11,0	0/0:17,0:9:13.08:0,13,101	0/0:11,0:6:10.89:0,11,57	1/1:26,0:25:58.80:291,59,0	1/1:30,1:30:57.24:268,57,0	1/1:23,0:23:32.32:141,32,0	1/1:32,0:27:2.05:165,2,0	1/1:13,0:13:29.31:114,29,0	1/1:17,1:18:32.59:197,33,0	1/1:18,1:19:37.11:220,37,0	1/1:18,0:17:28.66:137,29,0	1/1:17,0:17:27.91:125,28,0	1/1:13,0:12:28.56:145,29,0	1/1:14,0:12:29.39:206,29,0	1/1:16,0:16:26.17:111,26,0	1/1:11,0:11:2.66:17,3,0	1/1:16,3:16:29.07:217,29,0	0/1:23,0:21:7.15:104,0,7	0/0:20,0:20:3.52:0,4,55	0/1:11,0:9:24.82:30,0,25	1/1:8,1:9:16.07:98,16,0	1/1:16,0:16:33.04:152,33,0	1/1:9,0:8:15.17:65,15,0	1/1:11,0:10:14.47:56,14,0	1/1:23,0:23:47.01:210,47,0	0/0:25,0:23:16.58:0,17,93	0/1:10,0:9:9.54:82,0,10
chr10	46562399	.	TTG	T	11074.65	PASS	AB=0.917;AC=51;AF=0.911;AN=56;BaseQRankSum=-4.740;DP=480;FS=19.603;HRun=0;HaplotypeScore=97.0824;InbreedingCoeff=0.6958;MQ=47.85;MQ0=11;MQRankSum=-3.638;QD=24.45;ReadPosRankSum=0.411;VQSLOD=4.1088;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,16:21:44.74:599,45,0	1/1:1,4:5:11.95:144,12,0	0/0:17,0:9:14.06:0,14,125	0/0:10,0:5:11.66:0,12,87	1/1:8,19:26:69.01:858,69,0	1/1:4,26:29:68.88:929,69,0	1/1:3,19:22:47.33:616,47,0	1/1:9,23:27:29.19:769,29,0	1/1:5,8:13:36.12:485,36,0	1/1:9,10:19:41.92:488,42,0	1/1:9,11:20:53.59:592,54,0	1/1:6,11:16:36.09:467,36,0	1/1:9,8:17:47.11:567,47,0	1/1:7,6:12:35.88:386,36,0	1/1:2,12:12:30.10:413,30,0	1/1:7,9:16:39.07:474,39,0	1/1:1,10:11:8.62:95,9,0	1/1:12,7:16:20.69:321,21,0	1/1:23,0:21:42.50:237,43,0	1/1:19,1:20:14.82:199,15,0	0/1:10,1:9:4.94:63,0,5	1/1:1,8:9:18.03:233,18,0	1/1:6,10:16:44.69:495,45,0	1/1:2,7:8:23.67:301,24,0	1/1:0,10:9:18.05:241,18,0	1/1:6,17:23:57.93:701,58,0	1/1:24,1:23:3.86:92,4,0	1/1:4,6:9:14.35:309,14,0
chr10	46562400	.	TG	T	7360.60	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-2.972;DP=461;FS=16.960;HRun=1;HaplotypeScore=98.8754;InbreedingCoeff=0.8721;MQ=45.23;MQ0=11;MQRankSum=-2.533;QD=16.88;ReadPosRankSum=-0.217;VQSLOD=3.8297;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:20,1:20:44.30:306,44,0	1/1:5,0:5:11.81:77,12,0	0/0:15,0:7:10.75:0,11,85	0/0:10,0:5:7.97:0,8,60	1/1:27,0:26:70.98:468,71,0	1/1:27,3:29:68.05:469,68,0	1/1:19,2:21:47.43:352,47,0	1/1:30,1:26:44.17:423,44,0	1/1:11,2:13:35.59:264,36,0	1/1:15,0:15:41.38:281,41,0	1/1:18,2:20:53.07:379,53,0	1/1:12,4:15:35.49:243,35,0	1/1:15,3:18:47.50:337,47,0	1/1:11,2:12:35.65:254,36,0	1/1:14,0:12:29.11:184,29,0	1/1:13,3:16:38.44:271,38,0	1/1:10,1:11:8.92:79,9,0	1/1:15,0:12:25.42:178,25,0	1/1:7,14:19:50.93:523,51,0	1/1:9,10:19:46.10:480,46,0	1/1:6,5:9:13.37:109,13,0	1/1:9,0:9:17.67:112,18,0	1/1:15,1:16:44.56:334,45,0	1/1:7,1:8:23.57:169,24,0	1/1:10,0:9:17.81:125,18,0	1/1:19,2:21:56.23:378,56,0	1/1:8,17:23:34.99:403,35,0	1/1:9,1:9:25.71:163,26,0
chr10	46562765	.	G	GAACA	42318.87	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-9.947;DP=703;FS=6.971;HRun=0;HaplotypeScore=94.6896;InbreedingCoeff=0.9976;MQ=90.09;MQ0=0;MQRankSum=-11.938;QD=66.12;ReadPosRankSum=5.456;VQSLOD=6.5182;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,35:35:93.32:2381,93,0	1/1:2,5:8:21.07:512,21,0	0/0:32,0:32:60.42:0,60,1409	0/0:31,0:31:87.30:0,87,1597	1/1:4,24:29:66.14:1742,66,0	1/1:3,27:31:81.28:2133,81,0	1/1:3,23:29:69.24:1835,69,0	1/1:6,19:27:78.20:1869,78,0	1/1:4,18:22:51.17:1352,51,0	1/1:2,25:27:81.28:2176,81,0	1/1:3,26:31:72.25:1911,72,0	1/1:3,18:23:60.20:1492,60,0	1/1:2,24:26:72.25:1851,72,0	1/1:5,14:20:48.16:1250,48,0	1/1:4,31:35:90.31:2325,90,0	1/1:5,20:28:63.22:1725,63,0	1/1:2,19:23:51.17:1351,51,0	1/1:1,11:13:36.12:941,36,0	1/1:9,6:15:44.98:993,45,0	1/1:5,15:20:54.06:1242,54,0	1/1:2,20:23:63.22:1605,63,0	1/1:2,18:23:57.15:1449,57,0	1/1:3,16:19:45.09:1186,45,0	1/1:0,20:22:54.19:1479,54,0	1/1:1,21:23:63.22:1724,63,0	1/1:3,24:29:78.27:2072,78,0	1/1:4,37:44:99:2996,114,0	1/1:3,7:12:30.10:729,30,0
chr10	46572177	.	GC	G	3165.86	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=14.375;DP=722;FS=0.000;HRun=3;HaplotypeScore=75.2898;InbreedingCoeff=0.9998;MQ=86.17;MQ0=0;MQRankSum=-0.526;QD=30.74;ReadPosRankSum=1.242;VQSLOD=3.5402;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,114,1637	0/0:10,0:10:30.10:0,30,431	0/0:29,0:29:84.17:0,84,1103	0/0:20,0:20:60.09:0,60,742	0/0:28,0:28:81.24:0,81,1115	0/0:23,0:23:69.19:0,69,938	0/0:24,0:23:69.23:0,69,988	0/0:37,0:37:99:0,105,1469	0/0:27,0:27:81.24:0,81,1125	0/0:40,0:40:99:0,120,1681	0/0:20,0:20:60.17:0,60,825	0/0:25,0:25:75.25:0,75,1080	0/0:34,0:34:99:0,102,1460	0/0:30,0:30:90.22:0,90,1252	0/0:31,0:31:93.29:0,93,1318	0/0:23,0:23:69.20:0,69,972	0/0:27,0:27:78.21:0,78,1064	0/0:16,0:16:48.16:0,48,691	1/1:1,17:18:48.15:595,48,0	1/1:2,22:24:57.18:706,57,0	1/1:0,30:30:78.24:964,78,0	0/0:27,0:27:78.26:0,78,1122	0/0:25,0:25:72.24:0,72,1033	0/0:23,0:23:66.17:0,66,910	0/0:25,0:25:75.25:0,75,1079	0/0:25,0:25:75.24:0,75,1064	1/1:2,29:31:86.92:1061,87,0	0/0:11,0:11:33.11:0,33,475
chr10	46572970	.	A	AAATG	8551.88	PASS	AB=0.755;AC=24;AF=0.429;AN=56;BaseQRankSum=-9.751;DP=553;FS=1.988;HRun=0;HaplotypeScore=81.9394;InbreedingCoeff=0.7824;MQ=59.34;MQ0=1;MQRankSum=0.212;QD=34.76;ReadPosRankSum=-3.254;VQSLOD=4.3158;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:87.28:0,87,1348	0/0:4,0:4:12.04:0,12,184	0/0:25,0:17:6.02:0,6,89	0/0:18,0:18:12.04:0,12,191	1/1:5,9:14:25.33:577,25,0	1/1:2,8:11:21.07:503,21,0	1/1:13,1:17:30.10:515,30,0	0/1:30,4:34:29.24:314,0,29	0/0:29,0:29:60.20:0,60,955	1/1:4,14:18:42.14:926,42,0	1/1:5,9:14:30.10:624,30,0	0/0:21,0:21:45.15:0,45,716	0/0:15,0:15:27.09:0,27,423	1/1:11,19:30:60.21:1431,60,0	0/0:31,0:32:72.24:0,72,1126	0/1:15,25:40:32.26:1285,0,32	1/1:6,10:16:27.09:646,27,0	1/1:6,12:18:27.09:646,27,0	0/0:17,0:18:21.06:0,21,314	0/0:6,0:6:10.26:0,10,163	0/0:37,0:37:72.23:0,72,1117	0/0:13,0:13:30.09:0,30,455	0/0:7,0:7:9.03:0,9,143	0/0:16,0:16:30.10:0,30,478	1/1:5,4:9:9.03:215,9,0	1/1:3,10:15:36.09:799,36,0	0/0:25,0:24:63.14:0,63,948	1/1:3,3:10:3.01:72,3,0
chr10	46573482	.	C	CATT	20269.78	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-0.974;DP=789;FS=5.401;HRun=0;HaplotypeScore=150.2393;InbreedingCoeff=0.9967;MQ=79.48;MQ0=1;MQRankSum=-7.281;QD=55.99;ReadPosRankSum=0.240;VQSLOD=6.3477;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,47:56:99:2886,129,0	0/0:6,0:6:15.05:0,15,256	0/0:25,0:25:62.24:0,62,933	0/0:21,0:20:46.97:0,47,682	1/1:6,21:29:60.04:1169,60,0	1/1:0,16:17:45.15:1036,45,0	1/1:2,31:33:78.20:1733,78,0	1/1:10,26:36:96.30:2079,96,0	0/0:31,0:31:87.28:0,87,1454	1/1:5,20:25:69.21:1486,69,0	1/1:0,17:16:39.09:849,39,0	0/0:41,0:41:99:0,123,2094	0/0:29,0:29:81.25:0,81,1328	1/1:3,31:34:81.23:1787,81,0	0/0:44,0:44:99:0,132,2225	1/1:2,36:39:99:2457,108,0	0/0:35,0:35:99:0,102,1709	1/1:2,13:15:42.14:968,42,0	0/0:33,0:33:99:0,99,1569	0/0:21,0:21:57.18:0,57,940	0/0:57,0:56:99:0,163,2700	0/0:19,0:19:57.18:0,57,946	0/0:19,0:19:54.17:0,54,893	0/0:28,0:28:84.29:0,84,1433	1/1:2,19:20:57.15:1263,57,0	1/1:1,32:34:99:2143,99,0	0/0:18,0:18:51.17:0,51,869	1/1:0,6:6:18.06:414,18,0
chr10	46573602	.	G	GC	5037	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=15.376;DP=767;FS=2.617;HRun=0;HaplotypeScore=82.7557;InbreedingCoeff=0.9991;MQ=84.99;MQ0=0;MQRankSum=0.535;QD=40.30;ReadPosRankSum=0.193;VQSLOD=5.3080;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,126,1744	0/0:13,0:13:39.13:0,39,544	0/0:28,0:28:72.17:0,72,913	0/0:24,0:24:63.18:0,63,839	0/0:22,0:22:66.21:0,66,905	0/0:18,0:18:51.15:0,51,690	0/0:29,0:29:81.26:0,81,1112	0/0:30,0:30:87.29:0,87,1212	0/0:29,0:29:87.29:0,87,1214	0/0:32,0:32:96.32:0,96,1336	0/0:8,0:8:24.08:0,24,335	0/0:42,0:42:99:0,126,1745	0/0:28,0:28:81.26:0,81,1108	0/0:39,0:39:99:0,114,1540	0/0:36,0:36:99:0,108,1491	0/0:36,0:36:99:0,108,1492	0/0:31,0:31:89.89:0,90,1258	0/0:31,0:31:93.28:0,93,1277	1/1:0,31:31:93.31:1332,93,0	1/1:1,22:23:67.10:913,67,0	1/1:0,46:46:99:1742,123,0	0/0:20,0:20:57.19:0,57,797	0/0:15,0:15:45.15:0,45,629	0/0:29,0:29:81.27:0,81,1130	0/0:18,0:18:54.17:0,54,736	0/0:31,0:31:93.31:0,93,1300	1/1:0,25:25:75.25:1050,75,0	0/0:10,0:10:27.09:0,27,373
chr10	46574746	.	AAC	A	5126.97	PASS	AB=0.963;AC=25;AF=0.446;AN=56;BaseQRankSum=-4.842;DP=708;FS=0.390;HRun=0;HaplotypeScore=129.2160;InbreedingCoeff=0.7474;MQ=67.56;MQ0=12;MQRankSum=2.295;QD=13.56;ReadPosRankSum=2.680;VQSLOD=4.8973;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:40:68.31:0,68,604	0/0:11,0:11:2.98:0,3,22	0/1:36,0:22:4.11:4,0,91	0/1:32,0:21:22.85:23,0,102	1/1:5,23:29:57:635,57,0	0/0:24,1:25:28.67:0,29,785	0/1:21,3:24:58.31:58,0,490	1/1:22,15:40:15.49:445,15,0	0/0:6,0:19:41.92:0,42,377	1/1:8,19:28:56.85:581,57,0	1/1:3,23:27:53.98:600,54,0	0/0:8,0:17:36.03:0,36,376	0/0:11,0:24:33:0,33,308	1/1:5,13:19:29.75:304,30,0	0/0:38,0:39:14.34:0,14,104	1/1:12,29:43:71.70:766,72,0	1/1:13,16:30:44.63:456,45,0	1/1:4,9:13:26.91:290,27,0	0/0:21,0:21:32.55:0,33,220	0/0:21,0:20:10.04:0,10,81	0/0:10,0:9:4.19:0,4,20	0/0:10,0:22:32.99:0,33,287	0/0:13,0:26:44.75:0,45,414	0/0:5,0:20:36.45:0,36,312	1/1:3,13:18:35.77:373,36,0	1/1:11,11:24:20.81:386,21,0	0/0:32,0:31:41.65:0,42,331	1/1:3,6:9:18.05:207,18,0
chr10	46574763	.	A	ACACACACACACACACACACG	4711.70	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=-0.904;DP=758;FS=6.418;HRun=0;HaplotypeScore=388.3041;InbreedingCoeff=0.7140;MQ=55.40;MQ0=18;MQRankSum=-5.703;QD=18.55;ReadPosRankSum=-3.837;VQSLOD=1.7671;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:46,0:46:3.72:4,0,1385	1/1:3,5:14:3.48:235,3,0	0/0:42,0:14:20.02:0,20,229	0/0:41,0:18:20.04:0,20,330	0/0:36,0:36:78.12:0,78,2475	0/0:30,0:30:78.14:0,78,2604	0/0:26,0:26:54.96:0,55,1766	0/1:36,0:35:42.37:42,0,977	0/0:19,0:19:48.06:0,48,1132	0/0:27,0:27:66.17:0,66,1512	0/0:32,0:32:66.09:0,66,2557	0/0:21,0:19:45.11:0,45,1234	0/0:24,0:23:44.63:0,45,1032	0/0:26,0:25:42.49:0,42,1130	1/1:38,1:40:26.34:277,26,0	0/0:44,0:43:90.23:0,90,3206	0/0:32,0:30:63.42:0,63,2028	0/0:17,0:16:38.99:0,39,1108	1/1:23,0:21:48.26:1249,48,0	1/1:20,0:19:20.71:250,21,0	1/1:16,0:14:20.84:232,21,0	0/0:19,0:19:30.10:0,30,952	0/0:23,0:23:54.08:0,54,1295	0/0:21,0:20:38.24:0,38,1047	0/0:16,0:16:36.12:0,36,1574	0/1:27,0:27:99:129,0,1647	1/1:32,0:31:56.32:2293,56,0	0/0:8,0:8:21.05:0,21,864
chr10	46574856	.	A	ACGCTCTCC	494.39	PASS	AB=1.000;AC=4;AF=0.074;AN=54;BaseQRankSum=4.226;DP=709;FS=2.888;HRun=0;HaplotypeScore=180.7949;InbreedingCoeff=0.2684;MQ=54.77;MQ0=3;MQRankSum=-3.324;QD=11.77;ReadPosRankSum=-3.256;VQSLOD=2.4571;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:43:84.27:0,84,2395	0/0:9,0:9:27.09:0,27,791	0/0:13,0:2:3:0,3,27	0/0:12,0:4:8.82:0,9,186	0/0:32,0:32:96.29:0,96,2548	0/0:20,0:20:57.20:0,57,1668	0/0:20,0:20:48.09:0,48,1328	0/0:57,0:54:99:0,157,4192	0/0:17,0:17:48.15:0,48,1343	0/0:38,0:38:99:0,111,3126	0/0:23,0:23:69.22:0,69,1958	0/0:26,0:26:72.23:0,72,1949	0/0:19,0:19:57.15:0,57,1601	0/0:26,0:26:63.69:0,64,1789	0/0:32,0:32:66.78:0,67,1812	0/0:29,0:29:84.26:0,84,2315	0/0:31,0:30:78.08:0,78,2182	0/0:30,1:29:78.82:0,79,2048	0/1:5,0:4:58.05:246,0,58	./.	1/1:12,4:16:3.01:45,3,0	0/0:27,0:27:81.28:0,81,2372	0/0:13,0:13:36.12:0,36,976	0/0:32,0:32:90.25:0,90,2547	0/0:35,0:35:99:0,105,3011	0/0:38,0:38:99:0,108,3049	0/1:21,0:21:99:306,0,334	0/0:24,0:24:72.25:0,72,2058
chr10	46574857	.	CACAT	C	271.72	PASS	AC=4;AF=0.074;AN=54;BaseQRankSum=5.416;DP=700;FS=5.613;HRun=0;HaplotypeScore=123.4674;InbreedingCoeff=0.7003;MQ=55.97;MQ0=3;MQRankSum=-3.461;QD=12.94;ReadPosRankSum=-3.540;VQSLOD=2.0921;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:84.26:0,84,2192	0/0:9,0:9:27.08:0,27,668	0/0:14,0:2:2.99:0,3,24	0/0:13,0:5:5.33:0,5,131	0/0:32,0:32:93.23:0,93,2192	0/0:21,0:21:60.17:0,60,1471	0/0:19,0:19:48.15:0,48,1181	0/0:57,0:54:99:0,162,3360	0/0:17,0:17:48.11:0,48,1116	0/0:39,0:39:99:0,114,2838	0/0:23,0:23:69.23:0,69,1830	0/0:27,0:27:72.18:0,72,1664	0/0:19,0:19:57.14:0,57,1450	0/0:26,0:26:65.69:0,66,1602	0/0:32,0:32:71.81:0,72,1631	0/0:30,0:30:87.19:0,87,1957	0/0:31,0:30:81.07:0,81,1785	0/0:31,0:29:41.52:0,42,1612	1/1:2,1:2:3.01:48,3,0	./.	0/0:8,4:12:2.97:0,3,20	0/0:27,0:27:81.28:0,81,2168	0/0:14,0:14:42.10:0,42,897	0/0:32,0:32:90.21:0,90,2143	0/0:35,0:35:99:0,105,2670	0/0:38,0:38:99:0,110,2606	1/1:12,6:18:16.51:329,17,0	0/0:24,0:24:72.18:0,72,1877
chr10	46574947	.	GCA	G	5796.65	PASS	AB=0.896;AC=17;AF=0.304;AN=56;BaseQRankSum=-10.752;DP=906;FS=2.806;HRun=0;HaplotypeScore=190.2359;InbreedingCoeff=0.7159;MQ=60.06;MQ0=6;MQRankSum=-0.631;QD=18.52;ReadPosRankSum=5.436;VQSLOD=5.1620;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,43:51:99:1383,114,0	0/1:5,1:6:18.38:18,0,166	0/0:42,0:22:10.55:0,11,403	0/0:53,0:40:55.40:0,55,1009	0/0:24,0:24:26.06:0,26,64	0/1:22,3:25:39.99:40,0,872	0/0:27,2:29:14.75:0,15,694	0/0:48,0:48:39.20:0,39,95	1/1:4,27:31:57.01:691,57,0	0/0:33,0:33:31.04:0,31,76	0/0:22,0:21:19.26:0,19,47	1/1:7,24:31:12.13:643,12,0	1/1:7,22:29:66.12:791,66,0	0/0:30,0:30:28.96:0,29,71	0/1:43,3:45:10.03:10,0,1319	0/0:45,1:45:8.97:0,9,66	0/0:30,0:30:17.09:0,17,55	0/0:24,0:22:18.69:0,19,45	0/0:21,0:21:52.47:0,52,542	0/0:25,0:25:29.94:0,30,297	0/0:60,0:59:75.07:0,75,943	1/1:4,22:27:44.28:545,44,0	1/1:7,16:23:45.14:546,45,0	1/1:10,34:44:93.28:1128,93,0	0/0:18,0:18:17.34:0,17,43	0/0:35,0:35:37.27:0,37,90	0/0:40,0:40:81.16:0,81,812	0/0:11,0:10:7.48:0,7,18
chr10	46574959	.	AC	A	10721.82	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-7.816;DP=876;FS=12.413;HRun=1;HaplotypeScore=146.7074;InbreedingCoeff=0.9980;MQ=62.76;MQ0=11;MQRankSum=-0.761;QD=34.81;ReadPosRankSum=-0.522;VQSLOD=2.7467;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:56.37:0,56,212	0/0:9,0:9:25.31:0,25,340	0/0:44,0:24:40.61:0,41,808	0/0:56,0:43:99:0,120,1656	1/1:0,25:24:66.13:876,66,0	0/0:25,0:25:69.96:0,70,1043	0/0:28,0:28:67.47:0,67,1008	1/1:3,41:39:99:1568,116,0	0/0:34,0:34:38.71:0,39,228	1/1:0,32:31:90.29:1228,90,0	1/1:2,21:19:48.12:648,48,0	0/0:29,0:29:38.35:0,38,233	0/0:28,0:28:40.52:0,41,215	1/1:1,30:28:75.25:1049,75,0	0/0:37,0:36:94.01:0,94,1446	1/1:1,43:42:99:1511,109,0	1/1:2,26:28:72.15:978,72,0	1/1:2,20:20:48.16:670,48,0	0/0:25,0:25:75.25:0,75,1100	0/0:21,0:21:42.14:0,42,601	0/0:61,0:60:99:0,108,1523	0/0:27,0:27:29.08:0,29,157	0/0:19,0:19:21.70:0,22,76	0/0:43,0:43:62.64:0,63,352	1/1:0,17:17:42.14:582,42,0	1/1:2,32:34:99:1363,99,0	0/0:35,0:35:90.30:0,90,1266	1/1:0,8:7:18.06:252,18,0
chr10	46574965	.	A	ACT	3869.63	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-9.456;DP=864;FS=1.389;HRun=0;HaplotypeScore=186.4605;InbreedingCoeff=0.9961;MQ=65.95;MQ0=10;MQRankSum=-2.676;QD=27.64;ReadPosRankSum=0.556;VQSLOD=4.2188;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,117,907	0/0:11,0:11:26.98:0,27,264	0/0:41,0:25:59.26:0,59,710	0/0:53,0:44:99:0,112,1399	0/0:22,0:21:62.95:0,63,686	0/0:25,0:25:72.12:0,72,892	0/0:27,0:27:60.57:0,61,718	0/0:42,0:37:99:0,102,1197	0/0:33,0:33:69.20:0,69,537	0/0:29,0:28:78.16:0,78,901	0/0:22,0:18:48.03:0,48,535	0/0:28,0:28:68.75:0,69,551	0/0:30,0:31:77.58:0,78,600	0/0:29,0:26:63.02:0,63,739	0/0:39,0:38:93.25:0,93,1295	0/0:42,0:40:99:0,114,1344	0/0:29,0:29:65.54:0,66,779	0/0:21,0:20:45.08:0,45,512	1/1:5,20:25:63.02:854,63,0	1/1:2,16:18:16.26:414,16,0	1/1:10,51:62:39.63:1356,40,0	0/0:26,0:26:45.54:0,46,371	0/0:19,0:20:47.80:0,48,368	0/0:43,0:43:99:0,117,910	0/0:16,0:16:33.02:0,33,371	0/0:34,0:34:93.10:0,93,1048	1/1:4,29:34:54.78:1247,55,0	0/0:13,0:11:29.99:0,30,296
chr10	46575079	.	GC	G	1623.87	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.798;DP=751;FS=3.690;HRun=1;HaplotypeScore=77.4711;InbreedingCoeff=0.9958;MQ=86.63;MQ0=0;MQRankSum=-1.926;QD=35.30;ReadPosRankSum=2.287;VQSLOD=3.9795;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,102,1626	1/1:0,9:9:21.06:276,21,0	0/0:19,0:19:51.30:0,51,814	0/0:33,0:33:93.04:0,93,1401	0/0:25,0:25:75.26:0,75,1198	0/0:18,0:17:54.18:0,54,861	0/0:28,0:28:84.29:0,84,1340	0/0:34,0:33:99:0,99,1563	0/0:27,0:27:81.28:0,81,1291	0/0:43,0:42:99:0,126,1972	0/0:32,0:32:84.29:0,84,1339	0/0:24,0:24:69.24:0,69,1099	0/0:27,0:27:81.26:0,81,1271	0/0:25,0:25:75.26:0,75,1197	1/1:0,37:37:99:1469,105,0	0/0:38,0:38:99:0,111,1750	0/0:25,0:25:75.26:0,75,1183	0/0:16,0:16:48.16:0,48,767	0/0:21,0:21:63.19:0,63,971	0/0:31,0:31:90.31:0,90,1429	0/0:33,0:33:99:0,99,1530	0/0:21,0:21:63.21:0,63,1003	0/0:18,0:18:54.17:0,54,836	0/0:24,0:24:72.23:0,72,1119	0/0:20,0:20:60.20:0,60,959	0/0:30,0:30:90.31:0,90,1431	0/0:51,0:51:99:0,154,2429	0/0:7,0:7:21.07:0,21,329
chr10	46575332	.	GACACACACACAC	G	2908.64	PASS	AB=0.860;AC=15;AF=0.300;AN=50;BaseQRankSum=2.065;DP=486;FS=2.216;HRun=0;HaplotypeScore=167.7522;InbreedingCoeff=0.2568;MQ=58.99;MQ0=26;MQRankSum=-4.736;QD=16.34;ReadPosRankSum=-0.339;VQSLOD=2.7741;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:37:57.17:0,57,1888	0/0:13,0:12:24.08:0,24,690	0/0:29,0:15:9.01:0,9,231	0/0:29,0:21:11.96:0,12,201	./.	0/0:13,0:11:9.03:0,9,265	0/0:17,0:15:6:0,6,174	1/1:14,2:21:3.28:399,3,0	0/0:18,0:18:30.03:0,30,883	0/1:15,4:24:51.75:749,0,52	./.	0/0:14,0:14:21.69:0,22,656	0/0:14,0:14:34.67:0,35,1110	0/1:9,3:12:48.39:115,0,48	0/0:21,0:20:38.92:0,39,1060	0/1:12,2:16:47.64:177,0,48	1/1:8,0:15:3.01:98,3,0	0/1:5,0:5:40.94:41,0,58	0/1:23,0:22:80.07:80,0,289	./.	0/0:21,0:25:15:0,15,172	0/0:10,0:9:21.07:0,21,627	0/0:8,0:8:9.01:0,9,196	0/0:19,0:19:30.10:0,30,915	0/1:7,2:9:0:0,0,0	1/1:5,8:14:36.12:1157,36,0	0/1:23,0:25:74.05:74,0,85	1/1:5,3:6:8.99:172,9,0
chr10	46575356	.	CACACACACAG	C	2144.30	PASS	AB=1.000;AC=17;AF=0.315;AN=54;BaseQRankSum=3.563;DP=426;FS=8.637;HRun=0;HaplotypeScore=136.7334;InbreedingCoeff=0.1421;MQ=45.26;MQ0=32;MQRankSum=-3.754;QD=9.49;ReadPosRankSum=1.390;VQSLOD=1.8825;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:28:52.67:0,53,1124	0/0:12,0:9:15.48:0,15,268	0/0:7,0:4:3.01:0,3,107	0/0:6,0:1:3.01:0,3,52	0/0:11,0:11:0:0,0,0	0/0:21,0:17:17.88:0,18,399	0/1:17,0:13:10.29:10,0,116	1/1:20,0:19:17.17:332,17,0	0/0:19,0:19:28.30:0,28,493	0/1:19,0:19:99:429,0,238	./.	0/1:15,0:14:17.18:17,0,410	0/0:18,0:16:22.15:0,22,688	0/1:10,0:9:18.44:18,0,59	0/0:18,0:17:31.20:0,31,465	0/1:13,0:13:77.65:78,0,78	0/1:11,0:10:6.55:73,0,7	0/0:4,0:3:8.95:0,9,133	1/1:14,7:19:0.25:255,0,0	0/1:17,0:15:0.01:0,0,0	1/1:30,0:23:4.33:48,4,0	0/0:11,0:10:19.58:0,20,270	0/0:6,0:6:3.90:0,4,94	0/0:19,0:18:36.06:0,36,515	0/0:8,0:6:0.94:0,1,1	0/1:18,0:17:94.03:683,0,94	0/1:25,0:25:6.72:212,0,7	1/1:10,0:6:6.02:137,6,0
chr10	46575358	.	CACACACAG	C	1750.02	PASS	AB=0.955;AC=20;AF=0.370;AN=54;BaseQRankSum=2.414;DP=424;FS=14.727;HRun=0;HaplotypeScore=129.8251;InbreedingCoeff=0.1232;MQ=45.24;MQ0=32;MQRankSum=-3.054;QD=7.09;ReadPosRankSum=1.361;VQSLOD=1.6528;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:29:33.85:0,34,659	0/1:12,0:9:26.77:27,0,106	0/0:6,0:3:3.01:0,3,86	0/0:6,0:1:3.01:0,3,52	0/0:11,0:11:0:0,0,0	0/0:20,0:16:18:0,18,304	0/1:18,0:14:7.29:7,0,114	1/1:20,0:19:15.03:215,15,0	0/0:19,0:19:24.75:0,25,266	0/1:20,0:20:99:304,0,216	./.	0/0:16,0:15:7.50:0,8,267	0/1:19,0:17:22.52:23,0,446	0/0:9,0:8:5.98:0,6,48	0/0:18,0:17:8.52:0,9,199	0/1:13,0:13:56.08:56,0,70	0/1:13,0:12:44.51:51,0,45	0/0:3,0:4:7.27:0,7,105	1/1:19,0:17:19.31:317,19,0	0/1:3,14:15:0.02:0,0,0	1/1:28,0:21:4.49:96,4,0	0/1:10,0:9:5.69:6,0,106	0/1:7,0:7:12.67:13,0,83	0/0:19,0:18:29.93:0,30,287	0/0:8,0:6:0.94:0,1,1	0/1:18,0:17:78.59:481,0,79	1/1:4,19:23:11.25:216,11,0	1/1:10,0:6:6.02:99,6,0
chr10	46575360	.	C	CAGAGAG	1203.93	PASS	AB=0.980;AC=21;AF=0.389;AN=54;BaseQRankSum=3.584;DP=429;FS=30.466;HRun=0;HaplotypeScore=132.4805;InbreedingCoeff=-0.2087;MQ=45.34;MQ0=32;MQRankSum=-1.135;QD=4.27;ReadPosRankSum=-2.792;VQSLOD=0.3775;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:30:99:126,0,468	0/1:12,0:9:27.72:28,0,169	0/0:5,0:2:3.01:0,3,64	0/0:6,0:1:3.01:0,3,65	0/1:11,0:11:0:0,0,0	0/0:21,0:17:17.90:0,18,307	0/1:19,0:15:2.83:3,0,190	0/1:20,0:19:45.99:46,0,343	0/1:12,6:21:80.34:80,0,201	0/1:20,0:20:99:277,0,135	./.	0/1:16,0:15:99:141,0,176	0/1:19,0:17:24.32:24,0,264	1/1:9,0:8:4.57:79,5,0	0/1:18,0:17:19.75:20,0,253	1/1:15,0:14:5.74:117,6,0	0/1:14,0:12:30.23:30,0,49	1/1:6,0:5:6:92,6,0	0/0:18,0:16:19.28:0,19,495	0/0:17,0:15:0.47:0,0,1	0/0:29,0:22:6.49:0,6,128	0/0:10,0:9:13.51:0,14,175	0/1:7,0:7:16.54:17,0,44	0/1:17,0:16:99:146,0,278	0/1:8,0:6:0.05:0,0,0	0/1:17,0:16:99:122,0,102	0/0:23,0:23:1.50:0,2,67	0/0:10,0:6:5.52:0,6,44
chr10	46575835	.	ATG	A	3127.24	PASS	AB=0.811;AC=26;AF=0.500;AN=52;BaseQRankSum=-5.617;DP=578;FS=0.000;HRun=0;HaplotypeScore=116.1984;InbreedingCoeff=0.5390;MQ=59.87;MQ0=11;MQRankSum=2.454;QD=11.37;ReadPosRankSum=1.940;VQSLOD=2.8879;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:32:39.31:0,39,390	1/1:1,1:2:3.01:34,3,0	./.	./.	0/1:8,7:15:27.88:152,0,28	0/0:23,0:21:0.47:0,0,1	0/0:19,0:18:2.60:0,3,23	1/1:23,7:29:19.54:166,20,0	0/0:8,0:16:20.14:0,20,150	1/1:12,10:23:32.20:347,32,0	0/1:10,9:20:11.01:182,0,11	0/0:12,0:18:20.60:0,21,235	0/1:6,1:15:15.92:16,0,113	1/1:12,9:21:22.47:408,22,0	1/1:4,14:17:21.06:237,21,0	1/1:9,8:16:33.09:373,33,0	1/1:11,7:19:5.04:234,5,0	1/1:11,8:20:23.41:250,23,0	0/1:21,1:18:28.27:28,0,195	0/0:5,0:18:3.02:0,3,48	0/0:38,0:37:17.14:0,17,136	0/0:10,0:15:12.01:0,12,125	0/0:3,0:12:9:0,9,79	0/0:13,0:32:29.38:0,29,262	1/1:7,7:14:15.04:170,15,0	1/1:2,12:15:38.93:410,39,0	0/0:15,0:23:5.67:0,6,52	1/1:11,12:22:28.32:308,28,0
chr10	46575863	.	GTGTGTATC	G	423.94	PASS	AB=0.972;AC=11;AF=0.196;AN=56;BaseQRankSum=0.893;DP=640;FS=9.635;HRun=0;HaplotypeScore=187.7528;InbreedingCoeff=-0.2408;MQ=48.46;MQ0=39;MQRankSum=-3.714;QD=1.55;ReadPosRankSum=-2.918;VQSLOD=1.6178;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:40,0:40:65.86:66,0,1295	0/0:4,0:3:3.01:0,3,73	0/0:25,0:3:5.91:0,6,71	0/0:36,0:8:12.40:0,12,140	0/0:15,0:15:30.10:0,30,700	0/1:24,0:22:99:103,0,188	0/0:30,0:29:9.87:0,10,550	0/0:35,0:29:45.21:0,45,797	0/1:21,0:21:59.39:59,0,313	0/0:22,0:22:44.28:0,44,925	0/0:16,0:16:23.93:0,24,645	0/1:23,0:21:45.54:46,0,654	0/0:15,0:15:30.10:0,30,633	0/0:24,0:23:41.31:0,41,944	0/0:25,0:24:32.78:0,33,692	0/0:15,0:15:38.88:0,39,699	0/0:20,0:20:25.66:0,26,717	0/0:23,0:23:9.48:0,9,697	0/1:24,2:20:99:165,0,495	0/1:19,0:19:57.26:57,0,208	0/1:32,14:42:30.58:31,0,589	0/1:9,0:9:6.84:7,0,261	0/1:13,0:12:3.15:3,0,160	0/1:41,0:39:1.22:1,0,919	0/0:16,0:16:23.92:0,24,462	0/0:28,0:27:59.66:0,60,1442	0/1:12,0:12:22.95:23,0,56	0/0:17,0:16:28.31:0,28,605
chr10	46575896	.	TGC	T	729.60	PASS	AB=0.992;AC=19;AF=0.339;AN=56;BaseQRankSum=6.193;DP=700;FS=12.476;HRun=0;HaplotypeScore=152.1742;InbreedingCoeff=-0.1246;MQ=42.43;MQ0=50;MQRankSum=-1.744;QD=1.90;ReadPosRankSum=2.308;VQSLOD=1.9289;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:32:7.59:197,0,8	0/1:6,0:5:9.32:9,0,45	0/0:44,1:9:20.55:0,21,238	0/0:50,0:11:19.19:0,19,221	0/0:18,1:19:26.28:0,26,337	0/0:24,1:24:5.78:0,6,221	0/0:36,1:33:38.31:0,38,670	0/0:41,0:36:83.52:0,84,1240	0/1:24,0:24:47.24:47,0,61	0/0:19,0:16:45.66:0,46,675	0/0:15,0:15:21:0,21,328	1/1:28,0:25:17.76:223,18,0	0/1:14,0:13:28.03:28,0,64	0/1:33,0:33:0.26:0,0,611	0/0:24,1:24:14.10:0,14,451	0/0:19,0:19:21.29:0,21,414	0/1:23,0:22:36.70:37,0,480	0/0:19,0:18:23.29:0,23,457	0/1:25,0:16:34.30:55,0,34	0/1:17,0:17:5.33:7,0,5	0/1:45,1:36:15.94:32,0,16	0/1:11,0:11:40.12:60,0,40	1/1:8,0:8:5.81:46,6,0	0/1:45,0:43:78.73:96,0,79	0/1:14,0:14:1.40:1,0,176	0/1:36,0:27:7.06:7,0,781	0/1:10,0:8:12.95:13,0,18	0/1:10,1:10:29.16:29,0,263
chr10	46575898	.	CGT	C	1817.85	PASS	AB=0.923;AC=19;AF=0.339;AN=56;BaseQRankSum=2.843;DP=693;FS=5.370;HRun=0;HaplotypeScore=146.3664;InbreedingCoeff=0.4062;MQ=42.36;MQ0=48;MQRankSum=1.313;QD=6.31;ReadPosRankSum=4.104;VQSLOD=2.9499;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:31,2:32:27.61:484,28,0	0/0:6,0:5:4.25:0,4,37	0/0:41,1:9:17.66:0,18,191	0/0:46,0:11:13.86:0,14,114	0/0:18,0:18:15.05:0,15,202	0/0:25,0:24:12.98:0,13,190	0/0:37,0:33:32.92:0,33,490	0/0:43,0:38:64.83:0,65,914	0/1:19,5:24:16.39:106,0,16	0/0:19,0:16:40.42:0,40,492	0/0:14,0:14:15.05:0,15,224	0/1:26,4:26:8.17:265,0,8	0/1:12,2:13:17.63:84,0,18	0/0:34,0:34:35.37:0,35,452	0/0:24,0:23:20.07:0,20,302	0/0:18,0:18:26.66:0,27,326	0/0:23,0:22:29.06:0,29,388	0/0:19,0:18:23.75:0,24,301	1/1:23,1:16:7.83:148,8,0	1/1:15,1:16:14.47:116,14,0	1/1:47,0:36:11.69:212,12,0	0/1:10,1:11:5.20:143,0,5	1/1:8,1:9:6.02:76,6,0	0/1:44,1:43:27.58:312,0,28	0/1:14,0:14:22.36:22,0,147	0/0:36,0:27:45.32:0,45,658	1/1:8,2:7:5.65:28,6,0	0/1:10,0:9:4.60:5,0,160
chr10	46575905	.	GTGTGTA	G	1136.56	PASS	AB=0.983;AC=27;AF=0.482;AN=56;BaseQRankSum=6.018;DP=711;FS=4.188;HRun=0;HaplotypeScore=176.3842;InbreedingCoeff=-0.3299;MQ=41.03;MQ0=50;MQRankSum=-1.110;QD=1.96;ReadPosRankSum=-0.184;VQSLOD=2.5694;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:37,0:36:48.93:172,0,49	0/0:6,0:5:5.18:0,5,19	0/0:35,0:7:16.62:0,17,86	0/1:40,0:8:10.05:10,0,17	0/0:17,1:18:6.62:0,7,79	0/1:27,0:25:2.12:2,0,109	0/1:41,0:37:3.37:3,0,261	0/0:41,0:36:57.86:0,58,495	0/1:23,0:25:52.88:53,0,102	0/1:20,0:17:39.44:39,0,174	0/1:14,0:14:6.04:6,0,92	1/1:33,0:29:12.13:203,12,0	0/1:15,0:15:55.93:56,0,121	0/1:34,2:36:99:128,0,157	0/1:25,1:25:96.36:98,0,96	0/0:18,0:18:17.95:0,18,143	0/1:23,0:22:59.86:60,0,152	0/1:19,0:18:51.11:51,0,104	0/1:27,0:19:19.61:60,0,20	1/1:17,0:17:1.90:23,2,0	1/1:49,0:37:1.37:23,1,0	0/1:11,0:12:48.70:49,0,79	1/1:9,0:9:5.72:29,6,0	0/1:48,0:46:70.21:70,0,406	0/0:13,0:13:0.82:0,1,64	0/1:36,0:27:77.09:77,0,286	1/1:13,0:8:0.23:38,0,0	0/1:10,0:10:41.33:41,0,70
chr10	46575907	.	G	GTA	820.14	PASS	AB=0.987;AC=10;AF=0.179;AN=56;BaseQRankSum=2.001;DP=707;FS=3.220;HRun=0;HaplotypeScore=154.4878;InbreedingCoeff=0.1669;MQ=41.09;MQ0=49;MQRankSum=4.441;QD=4.29;ReadPosRankSum=4.976;VQSLOD=2.8271;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:37,0:36:13.31:263,0,13	0/0:6,0:5:5.69:0,6,57	0/0:34,0:7:17.93:0,18,218	0/0:36,0:6:13.74:0,14,144	0/0:19,0:20:17.78:0,18,251	0/0:27,0:25:18.63:0,19,233	0/0:41,0:37:47.65:0,48,618	0/0:39,0:35:71.94:0,72,973	1/1:22,0:22:0.04:82,0,0	0/0:20,0:17:47.68:0,48,594	0/0:15,0:15:18.04:0,18,253	0/1:33,0:29:14.18:75,0,14	0/1:17,0:16:74.51:95,0,75	0/0:36,0:36:61.10:0,61,686	0/0:26,0:25:38.62:0,39,492	0/0:18,0:18:26.79:0,27,346	0/0:23,0:22:44.02:0,44,510	0/0:16,0:15:29.99:0,30,391	0/0:28,0:19:20.42:0,20,136	0/0:16,0:16:2.99:0,3,26	0/0:53,0:41:9.12:0,9,46	0/1:12,0:12:2.15:53,0,2	1/1:9,0:9:5.64:27,6,0	0/1:45,4:46:55.04:354,0,55	0/0:14,0:14:2.67:0,3,159	0/0:36,0:27:59.67:0,60,761	0/1:12,0:7:8.17:8,0,19	0/0:12,0:11:18.53:0,19,238
chr10	46575911	.	ATGTGTG	A	879.29	PASS	AB=0.914;AC=26;AF=0.520;AN=50;BaseQRankSum=-3.369;DP=709;FS=18.433;HRun=0;HaplotypeScore=174.6907;InbreedingCoeff=0.2838;MQ=40.97;MQ0=44;MQRankSum=0.079;QD=2.23;ReadPosRankSum=-2.587;VQSLOD=1.2395;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:19.70:0,20,234	0/1:4,2:5:0.01:0,0,0	./.	./.	1/1:21,1:22:5.70:57,6,0	0/0:25,0:25:7.23:0,7,55	0/0:44,0:40:12:0,12,175	0/0:38,0:35:5.79:0,6,21	0/0:23,0:23:12.09:0,12,187	1/1:19,0:16:8.95:93,9,0	1/1:14,0:15:7.58:98,8,0	0/1:34,0:30:4.51:5,0,80	0/0:16,0:15:12.31:0,12,254	1/1:29,5:35:15.45:88,15,0	0/1:24,2:27:6.71:179,0,7	0/1:11,6:17:3.31:3,0,25	1/1:23,2:25:8.53:113,9,0	1/1:15,1:15:5.90:78,6,0	0/1:28,1:20:12:43,0,12	1/1:15,0:16:2.51:44,3,0	0/1:57,0:46:17.49:78,0,17	0/0:15,0:15:11.78:0,12,193	./.	0/0:48,0:45:40.88:0,41,768	1/1:13,2:15:0.94:2,1,0	0/1:37,0:28:55.26:90,0,55	1/1:9,2:6:3.01:42,3,0	0/1:11,0:10:16.54:26,0,17
chr10	46578090	.	TA	T	1630.86	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.115;DP=790;FS=3.485;HRun=2;HaplotypeScore=73.6399;InbreedingCoeff=0.9988;MQ=86.01;MQ0=0;MQRankSum=-1.929;QD=35.45;ReadPosRankSum=1.584;VQSLOD=4.3138;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,144,2133	1/1:0,20:20:60.20:779,60,0	0/0:28,0:28:77.42:0,77,1161	0/0:23,0:23:57.17:0,57,813	0/0:35,0:35:99:0,105,1555	0/0:24,0:24:69.22:0,69,1012	0/0:22,0:22:63.21:0,63,944	0/0:42,0:42:99:0,117,1736	0/0:25,0:25:72.24:0,72,1064	0/0:39,0:39:99:0,111,1660	0/0:16,0:16:42.13:0,42,609	0/0:42,0:42:99:0,117,1735	0/0:25,0:25:75.25:0,75,1123	0/0:35,0:35:99:0,105,1550	1/1:0,26:26:75.24:974,75,0	0/0:29,0:29:84.28:0,84,1259	0/0:41,0:41:99:0,120,1794	0/0:34,0:34:99:0,102,1521	0/0:23,0:23:69.23:0,69,1033	0/0:24,0:24:69.20:0,69,975	0/0:53,0:53:99:0,153,2172	0/0:25,0:25:72.21:0,72,1020	0/0:9,0:9:24.08:0,24,354	0/0:27,0:27:81.27:0,81,1214	0/0:15,0:15:42.13:0,42,610	0/0:20,0:20:60.19:0,60,881	0/0:28,0:28:84.27:0,84,1233	0/0:12,0:12:32.17:0,32,493
chr10	46579149	.	AGGTTT	A	7235.59	PASS	AC=48;AF=0.960;AN=50;DP=794;FS=0.000;HRun=0;HaplotypeScore=183.4528;InbreedingCoeff=0.2708;MQ=69.87;MQ0=11;QD=11.50;VQSLOD=4.0592;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:29,20:49:45.07:743,45,0	1/1:5,0:14:18.05:209,18,0	0/0:52,0:31:0.47:0,0,1	./.	1/1:16,0:24:12.04:140,12,0	1/1:23,8:31:21.07:369,21,0	1/1:13,6:19:9.03:145,9,0	./.	1/1:11,15:26:33.11:580,33,0	1/1:31,0:37:14.98:157,15,0	1/1:16,0:18:6.02:70,6,0	1/1:19,14:33:36.55:600,37,0	1/1:11,10:21:27.09:474,27,0	1/1:11,15:26:27.09:474,27,0	1/1:16,0:37:45.13:523,45,0	1/1:19,0:32:32.78:371,33,0	1/1:15,0:20:12.04:140,12,0	1/1:19,0:23:6.01:70,6,0	1/1:12,0:17:12.04:140,12,0	1/1:16,0:24:14.54:174,15,0	./.	1/1:17,7:24:14.96:263,15,0	1/1:16,6:22:18.06:316,18,0	1/1:25,16:41:39.13:685,39,0	1/1:15,0:21:9.03:105,9,0	1/1:25,0:31:12.92:142,13,0	1/1:24,0:34:26.76:313,27,0	1/1:4,0:4:3.01:33,3,0
chr10	46580879	.	GCTCCTTAAGC	G	8904.80	PASS	AB=0.957;AC=15;AF=0.268;AN=56;BaseQRankSum=14.542;DP=640;FS=7.670;HRun=0;HaplotypeScore=192.0895;InbreedingCoeff=0.9005;MQ=78.05;MQ0=0;MQRankSum=-15.065;QD=56.36;ReadPosRankSum=1.197;VQSLOD=4.0106;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,38:46:92.87:2929,93,0	0/0:10,0:10:30.10:0,30,1431	0/0:26,0:26:59.57:0,60,2713	0/0:19,0:19:54.19:0,54,2583	0/0:34,0:34:99:0,99,5036	0/0:19,0:19:57.18:0,57,2902	0/0:25,0:25:75.26:0,75,3837	0/0:19,0:19:57.20:0,57,3002	1/1:3,19:22:51.18:1700,51,0	0/0:34,0:34:99:0,99,4858	0/0:17,0:17:51.18:0,51,2644	1/1:0,18:18:42.14:1377,42,0	1/1:1,12:13:36.12:1188,36,0	0/0:21,0:21:57.20:0,57,2870	0/0:23,0:23:63.22:0,63,3210	0/1:21,1:22:33.80:34,0,3131	0/0:24,0:24:72.23:0,72,3596	0/0:20,0:20:60.18:0,60,3006	0/0:26,0:26:78.26:0,78,3933	0/0:26,0:26:78.27:0,78,3884	0/0:27,0:27:81.28:0,81,4240	1/1:1,10:11:24.08:775,24,0	1/1:1,6:7:15.05:500,15,0	1/1:6,13:19:12.49:401,12,0	0/0:27,0:27:81.28:0,81,4156	0/0:28,0:28:81.28:0,81,3894	0/0:39,0:39:99:0,117,6102	0/0:18,0:18:54.19:0,54,2860
chr10	46581176	.	G	GCA	8859.01	PASS	AB=0.688;AC=32;AF=0.571;AN=56;BaseQRankSum=-7.824;DP=767;FS=6.026;HRun=0;HaplotypeScore=192.1201;InbreedingCoeff=0.5247;MQ=55.06;MQ0=6;MQRankSum=-0.464;QD=17.75;ReadPosRankSum=-1.148;VQSLOD=3.8532;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,0:30:14.35:117,14,0	0/0:4,0:13:19.53:0,20,97	0/0:35,0:12:8.44:0,8,59	0/0:30,0:13:2.99:0,3,23	1/1:14,19:34:11.89:888,12,0	0/1:14,1:15:17.22:17,0,255	0/0:25,0:28:56.78:0,57,623	1/1:14,18:33:28:832,28,0	1/1:12,0:27:32.31:328,32,0	0/1:13,12:25:39.59:429,0,40	0/1:7,12:19:2.21:437,0,2	1/1:16,0:29:38.24:302,38,0	1/1:20,0:37:58.37:582,58,0	0/1:9,14:23:57.02:565,0,57	0/0:11,0:30:56.82:0,57,280	1/1:5,21:27:18.49:708,18,0	1/1:12,33:44:43.09:1145,43,0	1/1:5,19:25:19.04:759,19,0	0/0:10,0:20:28.88:0,29,140	0/0:5,0:16:25.20:0,25,125	0/0:17,0:62:57.51:0,58,400	1/1:4,0:18:12:105,12,0	1/1:12,1:19:6:74,6,0	1/1:14,1:24:15.01:152,15,0	1/1:7,19:26:40.98:620,41,0	0/1:11,14:27:22.14:585,0,22	0/0:7,0:31:70.77:0,71,345	0/1:5,7:13:28.24:215,0,28
chr10	46581229	.	G	GCA	4790.31	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=5.610;DP=844;FS=0.394;HRun=0;HaplotypeScore=235.6214;InbreedingCoeff=0.9520;MQ=58.67;MQ0=4;MQRankSum=-2.813;QD=30.13;ReadPosRankSum=2.487;VQSLOD=5.2070;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:8.61:0,9,112	0/0:13,0:13:29.98:0,30,423	0/0:56,0:40:85.14:0,85,1029	0/0:40,0:35:89.41:0,89,1118	0/0:30,0:30:84.20:0,84,1097	0/0:16,0:16:45.15:0,45,621	0/0:39,0:39:99:0,99,1368	0/0:24,0:24:47.98:0,48,632	0/0:31,0:31:31.98:0,32,417	0/0:30,0:30:87.14:0,87,1173	0/0:17,0:17:42:0,42,573	0/0:40,0:40:64.29:0,64,658	0/0:31,0:31:50.09:0,50,531	0/0:33,0:33:91.85:0,92,1265	0/0:37,0:36:99:0,108,1494	0/0:32,0:32:84.22:0,84,1150	0/0:47,0:47:99:0,117,1609	0/0:25,0:25:66.21:0,66,908	1/1:5,12:17:39.12:644,39,0	1/1:5,19:25:54.17:944,54,0	1/1:27,62:89:99:2209,138,0	0/0:9,0:9:10.26:0,10,94	0/0:16,0:16:16.28:0,16,155	0/0:28,0:28:9.15:0,9,91	0/0:26,0:26:60.06:0,60,834	0/0:28,0:28:75.20:0,75,1027	1/1:10,18:28:68.84:994,69,0	0/0:18,0:18:48.07:0,48,630
chr10	46581235	.	GCA	G	100.36	PASS	AB=0.973;AC=13;AF=0.232;AN=56;BaseQRankSum=11.033;DP=840;FS=5.143;HRun=0;HaplotypeScore=230.7068;InbreedingCoeff=0.2257;MQ=57.56;MQ0=4;MQRankSum=-10.149;QD=0.39;ReadPosRankSum=-3.709;VQSLOD=1.9822;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:16:3.41:12,3,0	0/0:13,0:13:27.06:0,27,396	0/0:49,1:35:63.48:0,63,997	0/0:37,0:32:50.07:0,50,829	0/0:29,0:29:75.22:0,75,1156	0/0:15,0:15:36.12:0,36,580	0/0:39,0:39:49.74:0,50,1312	0/0:19,0:19:7.74:0,8,646	0/1:34,0:34:21.14:21,0,122	0/0:27,1:28:43.73:0,44,1214	0/0:18,0:18:39.09:0,39,591	0/1:44,1:45:56.50:56,0,117	0/1:27,0:27:55.54:56,0,161	0/0:38,1:39:61.78:0,62,1383	0/1:36,3:38:1.09:1,0,1487	0/0:33,0:33:75.20:0,75,1130	0/0:46,0:46:99:0,108,1746	0/1:23,1:24:35.38:35,0,766	0/0:19,0:19:44.82:0,45,419	0/0:24,0:24:51.06:0,51,500	0/0:91,0:91:99:0,133,1346	1/1:9,0:9:7.36:22,7,0	0/1:16,0:16:11.04:11,0,38	1/1:27,0:27:6.58:20,7,0	0/0:26,1:27:56.77:0,57,861	0/0:30,0:30:47.11:0,47,1189	0/0:28,0:28:55.12:0,55,573	0/1:17,1:18:16.06:16,0,582
chr10	46581245	.	ACACACTCACACT	A	2599.31	PASS	AB=0.971;AC=10;AF=0.179;AN=56;BaseQRankSum=11.464;DP=843;FS=0.000;HRun=0;HaplotypeScore=335.1198;InbreedingCoeff=0.4542;MQ=57.25;MQ0=5;MQRankSum=-11.170;QD=15.47;ReadPosRankSum=0.513;VQSLOD=1.1169;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:14:5.36:88,5,0	0/0:11,0:11:30.10:0,30,1501	0/0:48,0:32:69.49:0,69,2956	0/0:44,0:35:82.03:0,82,3430	0/0:27,0:27:78.26:0,78,3965	0/0:16,0:16:45.15:0,45,2216	0/0:36,0:36:81.61:0,82,4933	0/0:22,0:21:25.80:0,26,2394	0/1:30,0:30:98.18:386,0,98	0/0:32,0:32:96.33:0,96,4783	0/0:17,0:17:42.12:0,42,2250	0/1:43,1:44:65.29:1052,0,65	0/1:26,3:29:99:648,0,147	0/0:37,0:37:99:0,105,5664	0/0:42,0:41:99:0,123,6236	0/0:34,0:34:87.25:0,87,4073	0/0:46,0:46:99:0,126,6653	0/0:25,0:25:52.33:0,52,3016	0/0:20,0:20:57.42:0,57,1961	0/0:25,0:25:63.21:0,63,3171	0/0:90,0:90:99:0,150,7344	1/1:6,0:6:12.04:174,12,0	0/1:14,0:14:27.97:231,0,28	1/1:31,0:31:11.20:173,11,0	0/0:26,0:26:62.80:0,63,3170	0/0:31,0:31:90.31:0,90,4576	0/0:28,0:28:66:0,66,2800	0/0:18,0:18:24.38:0,24,2562
chr10	46581247	.	ACACTCACACT	A	5745.13	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=8.035;DP=851;FS=0.479;HRun=0;HaplotypeScore=299.6745;InbreedingCoeff=0.9649;MQ=59.29;MQ0=5;MQRankSum=-11.994;QD=34.20;ReadPosRankSum=0.738;VQSLOD=4.0272;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,4:14:5.53:187,6,0	0/0:11,0:11:27.09:0,27,1186	0/0:50,0:33:50.89:0,51,2053	0/0:45,0:37:83.77:0,84,2723	0/0:27,0:27:63.22:0,63,3101	0/0:17,0:17:42.14:0,42,1815	0/0:36,0:36:90.29:0,90,4017	0/0:24,0:23:51.15:0,51,1851	1/1:11,19:30:30.64:955,31,0	0/0:33,0:33:84.29:0,84,3857	0/0:17,0:17:39.13:0,39,1793	1/1:8,37:45:78.10:2337,78,0	1/1:12,17:29:35.70:977,36,0	0/0:37,0:37:99:0,99,4659	0/0:44,0:43:99:0,117,5111	0/0:34,0:34:69.24:0,69,3291	0/0:45,0:45:99:0,120,5432	0/0:25,0:25:57.20:0,57,2313	0/0:21,0:21:42.13:0,42,1583	0/0:25,0:25:63.21:0,63,2791	0/0:88,0:88:99:0,144,6251	1/1:1,4:5:12.04:372,12,0	1/1:6,8:14:17.80:547,18,0	1/1:11,20:31:11.62:370,12,0	0/0:25,0:25:54.19:0,54,2567	0/0:31,0:31:81.27:0,81,3715	0/0:29,0:29:57.19:0,57,2370	0/0:18,0:18:45.15:0,45,2131
chr10	46581489	.	A	AC	8094.49	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-7.714;DP=674;FS=7.847;HRun=5;HaplotypeScore=105.6793;InbreedingCoeff=0.9915;MQ=77.80;MQ0=0;MQRankSum=-1.053;QD=31.99;ReadPosRankSum=1.197;VQSLOD=4.4697;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,111,1189	0/0:12,0:12:30.07:0,30,322	0/0:20,0:20:48.07:0,48,495	0/0:17,0:17:45.08:0,45,471	1/1:1,18:19:48.16:627,48,0	0/0:13,0:13:33.08:0,33,355	0/0:23,0:23:66.17:0,66,709	1/1:2,19:21:51.15:657,51,0	0/0:30,0:30:75.19:0,75,805	1/1:1,21:22:57.17:735,57,0	1/1:1,12:13:30.10:394,30,0	0/0:38,0:38:99:0,108,1141	0/0:30,0:30:84.21:0,84,902	1/1:5,32:37:78.25:1026,78,0	0/0:25,0:25:66.15:0,66,701	1/1:2,25:27:69.22:908,69,0	1/1:3,38:41:99:1303,99,0	1/1:2,19:21:51.17:671,51,0	0/0:23,0:22:60.14:0,60,637	0/0:19,0:19:51.11:0,51,539	0/0:36,0:36:99:0,99,1055	0/0:18,0:18:45.11:0,45,484	0/0:22,0:22:63.14:0,63,666	0/0:24,0:24:63.16:0,63,675	1/1:1,16:17:42.14:553,42,0	1/1:3,28:31:84.27:1103,84,0	0/0:27,0:27:72.18:0,72,774	1/1:0,4:4:9.03:118,9,0
chr10	46583160	.	C	CA	5712.45	PASS	AB=0.743;AC=50;AF=0.893;AN=56;BaseQRankSum=-1.933;DP=527;FS=0.727;HRun=13;HaplotypeScore=71.9002;InbreedingCoeff=-0.0844;MQ=53.71;MQ0=25;MQRankSum=0.311;QD=10.84;ReadPosRankSum=-0.626;VQSLOD=4.2702;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:18,24:40:20.63:482,21,0	1/1:6,0:10:8.52:43,9,0	0/1:15,1:6:6.59:7,0,14	0/1:7,0:4:7.21:24,0,7	1/1:9,19:31:18.57:302,19,0	1/1:10,0:15:24.24:116,24,0	1/1:5,0:9:14.74:65,15,0	1/1:13,13:27:30.04:304,30,0	1/1:6,10:14:23.99:215,24,0	1/1:10,13:23:21.46:342,21,0	1/1:5,11:17:29.57:241,30,0	1/1:6,7:11:21.02:194,21,0	0/1:7,13:20:5.09:242,0,5	1/1:4,6:10:3.35:157,3,0	1/1:12,0:18:16.12:80,16,0	1/1:8,11:20:0.11:230,0,0	1/1:9,9:14:13.66:208,14,0	1/1:4,16:19:43.92:382,44,0	1/1:7,1:13:23.01:130,23,0	1/1:12,0:27:19.51:180,20,0	1/1:6,2:20:34.41:199,34,0	0/1:10,13:24:16.80:276,0,17	0/1:12,9:21:32.52:208,0,33	1/1:6,12:16:27.72:322,28,0	0/1:4,9:12:13.11:143,0,13	1/1:5,14:20:6.84:332,7,0	1/1:9,1:18:23.22:148,23,0	1/1:4,6:6:15.02:139,15,0
chr10	46583554	.	A	AT	1226.66	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-4.003;DP=623;FS=1.477;HRun=1;HaplotypeScore=61.5439;InbreedingCoeff=0.9985;MQ=71.34;MQ0=1;MQRankSum=-1.643;QD=37.17;ReadPosRankSum=-0.285;VQSLOD=3.7277;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,120,1539	1/1:0,11:11:30.10:449,30,0	0/0:14,0:14:39.13:0,39,505	0/0:11,0:10:25.11:0,25,289	0/0:33,0:33:93.20:0,93,1155	0/0:33,0:33:99:0,99,1249	0/0:13,0:13:36.05:0,36,446	0/0:34,0:34:99:0,99,1273	0/0:12,0:12:36.12:0,36,467	0/0:22,0:22:66.21:0,66,846	0/0:22,0:22:66.16:0,66,815	0/0:18,0:18:54.18:0,54,701	0/0:24,0:24:66.20:0,66,842	0/0:13,0:13:36.10:0,36,452	1/1:0,22:22:60.20:899,60,0	0/0:29,0:29:84.25:0,84,1062	0/0:23,0:23:66.19:0,66,841	0/0:12,0:12:36.10:0,36,451	0/0:20,0:20:57.18:0,57,728	0/0:36,0:36:99:0,108,1347	0/0:18,0:18:54.18:0,54,701	0/0:19,0:19:57.14:0,57,694	0/0:23,0:23:63.20:0,63,818	0/0:19,0:19:51.17:0,51,661	0/0:13,0:13:39.13:0,39,506	0/0:36,0:36:99:0,99,1247	0/0:40,0:39:99:0,117,1490	0/0:13,0:13:39.11:0,39,491
chr10	46583668	.	ATTTTG	A	5917.68	PASS	AC=44;AF=1.000;AN=44;DP=654;FS=0.000;HRun=0;HaplotypeScore=139.0935;InbreedingCoeff=-0.0225;MQ=62.12;MQ0=1;QD=11.51;VQSLOD=4.0370;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	1/1:5,0:5:3.01:53,3,0	./.	./.	1/1:25,11:36:27.06:442,27,0	1/1:16,0:29:24.07:279,24,0	1/1:20,0:20:2.90:16,3,0	./.	1/1:11,0:14:9.03:105,9,0	1/1:19,11:30:33.11:579,33,0	1/1:19,10:29:15.05:263,15,0	1/1:13,0:22:6.02:70,6,0	1/1:11,0:17:19.87:214,20,0	1/1:2,10:12:24.08:421,24,0	1/1:21,0:28:9.03:105,9,0	1/1:16,0:27:21.01:220,21,0	1/1:12,10:21:30.10:526,30,0	1/1:17,8:24:18.06:316,18,0	1/1:16,0:23:18.52:210,19,0	1/1:10,0:18:12.04:140,12,0	./.	1/1:12,0:24:15:174,15,0	./.	1/1:18,0:21:8.75:104,9,0	1/1:23,20:43:45.05:789,45,0	1/1:26,14:40:42.11:701,42,0	1/1:14,0:20:12.04:140,12,0	1/1:8,1:9:3.01:53,3,0
chr10	46584274	.	T	TA	4046.27	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=15.008;DP=700;FS=1.768;HRun=3;HaplotypeScore=72.8034;InbreedingCoeff=0.9995;MQ=82.02;MQ0=0;MQRankSum=-1.113;QD=36.45;ReadPosRankSum=0.414;VQSLOD=4.1435;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:96.29:0,96,1151	0/0:14,0:14:42.13:0,42,504	0/0:20,0:19:41.68:0,42,463	0/0:20,0:19:38.45:0,38,442	0/0:35,0:35:99:0,99,1186	0/0:26,0:26:75.20:0,75,874	0/0:15,0:15:36.11:0,36,432	0/0:36,0:36:99:0,99,1167	0/0:32,0:32:90.26:0,90,1067	0/0:37,0:37:99:0,108,1287	0/0:23,0:23:69.21:0,69,827	0/0:23,0:23:69.21:0,69,828	0/0:19,0:19:51.16:0,51,612	0/0:27,0:27:75.22:0,75,888	0/0:13,0:13:39.12:0,39,468	0/0:28,0:28:81.25:0,81,971	0/0:20,0:20:57.17:0,57,683	0/0:25,0:25:75.23:0,75,898	1/1:1,20:21:57.19:766,57,0	1/1:2,36:38:99:1391,105,0	1/1:1,16:17:48.16:643,48,0	0/0:23,0:23:66.19:0,66,780	0/0:28,0:28:72.21:0,72,853	0/0:10,0:10:30.09:0,30,360	0/0:34,0:34:90.27:0,90,1068	0/0:36,0:36:99:0,102,1213	1/1:2,33:35:93.30:1246,93,0	0/0:9,0:9:27.08:0,27,322
chr10	46585129	.	CT	C	862.82	PASS	AB=0.736;AC=39;AF=0.722;AN=54;BaseQRankSum=0.428;DP=299;FS=3.508;HRun=15;HaplotypeScore=41.7563;InbreedingCoeff=0.0613;MQ=54.87;MQ0=8;MQRankSum=-0.014;QD=3.67;ReadPosRankSum=3.598;VQSLOD=-0.6503;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:11,3:11:13.97:81,14,0	1/1:2,1:3:2.25:18,2,0	0/1:35,1:9:8.05:9,0,8	0/0:44,1:17:8.08:0,8,45	0/1:2,6:8:14.61:41,0,15	0/0:10,0:10:17.94:0,18,145	0/1:3,2:5:10.23:10,0,44	1/1:10,11:20:23.41:152,23,0	1/1:4,1:5:2.85:19,3,0	1/1:8,4:11:10.69:63,11,0	1/1:6,3:9:2.78:19,3,0	1/1:5,5:10:5.70:38,6,0	0/0:3,2:5:0:0,0,0	1/1:6,0:5:5.79:37,6,0	0/1:1,3:4:17.43:30,0,17	0/1:7,5:12:8.32:62,0,8	1/1:6,12:16:14.57:96,15,0	1/1:5,9:14:20.59:134,21,0	0/1:6,0:6:2.37:2,0,25	0/1:6,0:8:4.76:5,0,33	./.	1/1:2,1:3:2.95:19,3,0	0/1:5,1:6:13.21:13,0,18	1/1:3,3:6:9.42:66,9,0	0/1:2,8:10:13.90:14,0,18	1/1:7,2:8:5.49:38,5,0	1/1:2,0:5:8.48:26,8,0	1/1:0,2:2:2.96:19,3,0
chr10	46585147	.	G	GT	780.96	PASS	AB=0.988;AC=20;AF=0.385;AN=52;BaseQRankSum=-0.574;DP=350;FS=0.000;HRun=10;HaplotypeScore=45.0068;InbreedingCoeff=0.5816;MQ=56.88;MQ0=27;MQRankSum=-3.082;QD=5.07;ReadPosRankSum=2.723;VQSLOD=-0.0284;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:14,4:14:21.03:211,21,0	0/1:6,0:6:9.82:10,0,62	0/0:64,0:13:17.59:0,18,110	0/1:64,0:13:7.98:8,0,54	0/0:12,0:12:17.94:0,18,142	0/0:8,0:7:14.47:0,14,107	0/0:6,0:6:8.98:0,9,72	0/1:18,1:16:13.57:14,0,168	1/1:2,3:5:2.80:13,3,0	0/0:11,0:9:23.96:0,24,195	0/0:5,0:5:11.98:0,12,98	1/1:4,1:5:1.73:30,2,0	0/1:3,0:3:0:0,0,0	0/0:4,0:3:8.99:0,9,74	0/0:3,0:3:2.98:0,3,22	0/0:11,0:11:23.84:0,24,183	0/0:26,0:24:47.74:0,48,383	0/0:16,0:15:35.81:0,36,282	1/1:6,6:11:17.88:173,18,0	1/1:3,3:6:6.02:64,6,0	1/1:0,4:4:9.02:96,9,0	./.	./.	1/1:4,1:5:15.03:148,15,0	0/0:12,0:12:16.21:0,16,123	0/0:9,0:9:25.88:0,26,193	1/1:1,5:6:18.05:191,18,0	0/0:4,0:4:5.96:0,6,49
chr10	46585995	.	C	CAA	5128.29	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=-4.141;DP=634;FS=5.078;HRun=13;HaplotypeScore=93.6946;InbreedingCoeff=0.8895;MQ=74.08;MQ0=1;MQRankSum=-1.397;QD=16.93;ReadPosRankSum=-4.893;VQSLOD=2.9165;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:34:66.58:0,67,561	0/0:9,0:9:20.77:0,21,185	0/1:36,0:25:41.53:42,0,107	0/0:13,0:10:8.89:0,9,69	1/1:11,15:32:50.25:529,50,0	0/0:2,0:22:52.38:0,52,238	0/0:7,0:15:33.39:0,33,171	1/1:5,18:29:41.37:606,41,0	0/0:21,0:23:41.61:0,42,353	1/1:7,15:24:45.01:496,45,0	1/1:6,9:17:30.02:356,30,0	0/0:24,0:26:44.03:0,44,393	0/0:22,0:22:52.42:0,52,439	1/1:6,21:29:44.63:579,45,0	0/0:18,0:20:38.74:0,39,384	1/1:6,13:22:26.01:270,26,0	1/1:8,22:36:52.57:579,53,0	1/1:10,7:19:43.65:440,44,0	0/0:20,0:20:15.94:0,16,290	0/0:25,0:26:50.54:0,51,493	0/0:23,0:23:50.87:0,51,445	0/0:5,0:6:2.82:0,3,71	0/0:13,0:16:41.19:0,41,326	0/0:24,0:25:35.63:0,36,361	1/1:6,12:20:20.55:240,21,0	1/1:5,20:27:60.10:717,60,0	0/0:27,0:29:67.84:0,68,568	1/1:2,8:11:26.20:273,26,0
chr10	46586116	.	G	GC	14662.93	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-10.403;DP=591;FS=3.854;HRun=1;HaplotypeScore=63.2688;InbreedingCoeff=0.9981;MQ=85.32;MQ0=0;MQRankSum=-5.532;QD=40.62;ReadPosRankSum=1.282;VQSLOD=5.5638;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,141,1814	1/1:0,11:11:30.10:449,30,0	0/0:20,0:19:54.17:0,54,686	0/0:22,0:22:63.15:0,63,747	1/1:0,29:29:78.26:1169,78,0	0/0:21,0:21:60.20:0,60,779	0/0:8,0:8:24.08:0,24,311	1/1:1,32:33:96.31:1419,96,0	0/0:16,0:16:45.15:0,45,584	1/1:1,22:23:66.20:967,66,0	1/1:0,16:16:45.15:674,45,0	0/0:23,0:23:66.21:0,66,854	0/0:26,0:26:75.24:0,75,974	1/1:0,35:35:99:1484,99,0	1/1:0,20:20:60.20:896,60,0	1/1:2,14:16:42.14:630,42,0	1/1:1,32:33:81.27:1214,81,0	1/1:1,20:21:20.05:772,20,0	1/1:2,14:16:48.16:715,48,0	1/1:1,15:16:42.13:608,42,0	1/1:3,9:12:33.08:452,33,0	0/0:10,0:10:27.06:0,27,322	0/0:14,0:14:36.10:0,36,453	0/0:22,0:22:60.16:0,60,749	1/1:4,16:20:45.15:674,45,0	1/1:2,32:34:96.32:1434,96,0	1/1:1,17:18:54.17:789,54,0	1/1:0,8:8:21.07:315,21,0
chr10	46586138	.	C	CA	2138.37	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=3.465;DP=538;FS=2.722;HRun=7;HaplotypeScore=90.8825;InbreedingCoeff=0.9854;MQ=75.79;MQ0=0;MQRankSum=-6.676;QD=22.75;ReadPosRankSum=-3.392;VQSLOD=2.1104;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,141,1354	1/1:4,0:9:16.97:83,17,0	0/0:13,0:12:15.01:0,15,139	0/0:16,0:17:39.03:0,39,369	0/0:25,0:25:62.93:0,63,585	0/0:19,0:19:48.08:0,48,464	0/0:11,0:11:27.02:0,27,255	0/0:38,0:38:96.12:0,96,918	0/0:13,0:13:39.06:0,39,376	0/0:16,0:16:42.03:0,42,393	0/0:15,0:15:33.05:0,33,317	0/0:23,0:23:51.06:0,51,487	0/0:26,0:26:60.09:0,60,579	0/0:28,0:28:60.07:0,60,579	1/1:4,0:19:44.46:216,44,0	0/0:14,0:14:36.06:0,36,348	0/0:28,0:28:72.12:0,72,695	0/0:18,0:18:42.04:0,42,398	1/1:5,14:18:45.14:543,45,0	1/1:2,16:18:48.15:575,48,0	1/1:1,6:7:18.01:200,18,0	0/0:5,0:5:12.02:0,12,116	0/0:10,0:10:21.02:0,21,197	0/0:14,0:14:39.06:0,39,377	0/0:16,0:16:42.06:0,42,406	0/0:32,0:32:93.15:0,93,898	1/1:4,18:22:60.17:707,60,0	0/0:10,0:10:27.04:0,27,261
chr10	46589003	.	A	AAG	8613.88	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-14.955;DP=681;FS=4.518;HRun=0;HaplotypeScore=85.5624;InbreedingCoeff=0.9859;MQ=82.29;MQ0=3;MQRankSum=-0.021;QD=30.99;ReadPosRankSum=0.402;VQSLOD=6.7989;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:36:70.58:0,71,1034	0/0:6,0:6:12.04:0,12,150	0/0:29,0:27:37.56:0,38,441	0/0:41,0:36:18.64:0,19,362	1/1:3,25:27:72.11:1117,72,0	0/0:23,0:23:63.19:0,63,777	0/0:25,0:25:66.08:0,66,731	1/1:15,25:40:38.57:1049,39,0	0/0:18,0:18:48.12:0,48,565	1/1:6,23:29:66.18:1001,66,0	1/1:2,13:15:39.13:640,39,0	0/0:22,0:22:57.16:0,57,690	0/0:24,0:24:35.16:0,35,647	1/1:7,16:23:33.11:541,33,0	0/0:34,0:34:84.24:0,84,1007	1/1:11,21:32:10.63:701,11,0	1/1:9,23:32:60.20:985,60,0	1/1:4,11:14:27.09:443,27,0	0/0:6,0:6:15.04:0,15,177	0/0:27,0:27:63.64:0,64,744	0/0:26,0:26:66.18:0,66,789	0/0:23,0:23:54.16:0,54,661	0/0:21,0:21:42.11:0,42,501	0/0:21,0:22:37.02:0,37,632	1/1:5,21:27:51.17:837,51,0	1/1:6,19:25:60.14:858,60,0	0/0:19,0:20:50.97:0,51,589	1/1:0,10:11:27.07:443,27,0
chr10	46590317	.	GA	G	2772.85	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=10.423;DP=599;FS=1.850;HRun=7;HaplotypeScore=59.5278;InbreedingCoeff=0.9674;MQ=77.66;MQ0=1;MQRankSum=-0.964;QD=26.41;ReadPosRankSum=0.289;VQSLOD=4.2504;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,135,1669	0/0:3,0:3:9.03:0,9,110	0/0:15,0:15:38.67:0,39,416	0/0:15,0:16:29.97:0,30,309	0/0:28,0:28:81.26:0,81,1018	0/0:25,0:25:69.22:0,69,868	0/0:18,0:18:48.14:0,48,592	0/0:24,0:24:60.19:0,60,754	0/0:20,0:20:57.18:0,57,717	0/0:29,0:28:78.25:0,78,981	0/0:20,0:20:60.19:0,60,755	0/0:19,0:19:57.14:0,57,686	0/0:16,0:16:45.13:0,45,552	0/0:25,0:25:63.20:0,63,793	0/0:23,0:23:60.18:0,60,742	0/0:27,0:27:81.26:0,81,1017	0/0:28,0:28:81.26:0,81,1017	0/0:9,0:9:24.08:0,24,302	1/1:2,28:30:84.18:853,84,0	1/1:1,30:31:90.20:917,90,0	1/1:0,11:11:30.07:306,30,0	0/0:22,0:22:63.20:0,63,792	0/0:16,0:16:42.13:0,42,528	0/0:21,0:21:57.18:0,57,711	0/0:14,0:14:42.13:0,42,528	0/0:25,0:24:57.18:0,57,717	1/1:2,31:33:84.19:856,84,0	0/0:3,0:3:9.03:0,9,113
chr10	46591867	.	CT	C	2092.38	PASS	AB=0.962;AC=10;AF=0.179;AN=56;BaseQRankSum=10.322;DP=709;FS=0.000;HRun=9;HaplotypeScore=66.8342;InbreedingCoeff=0.7898;MQ=71.51;MQ0=0;MQRankSum=-0.882;QD=17.29;ReadPosRankSum=1.596;VQSLOD=3.8463;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,105,1198	1/1:1,6:7:18.01:165,18,0	0/1:11,1:11:10.13:10,0,105	0/1:8,0:8:4.60:5,0,77	0/0:30,0:30:78.18:0,78,870	1/1:8,24:32:71.96:650,72,0	1/1:1,18:19:45.02:412,45,0	0/0:34,0:34:75.22:0,75,866	0/0:23,0:23:34.27:0,34,586	0/0:36,0:36:93.28:0,93,1074	0/0:17,0:17:51.15:0,51,589	0/0:24,0:24:54.12:0,54,600	0/0:27,1:28:44.75:0,45,768	0/0:29,0:29:84.25:0,84,968	1/1:4,39:43:99:1016,111,0	0/0:30,0:30:78.20:0,78,881	0/0:27,0:27:69.21:0,69,796	0/0:17,0:17:42.07:0,42,460	0/0:28,0:28:72.21:0,72,831	0/0:31,0:31:81.21:0,81,914	0/0:17,0:17:42.12:0,42,485	0/0:23,0:23:63.19:0,63,726	0/0:22,0:22:60.18:0,60,689	0/0:17,0:17:51.15:0,51,588	0/0:29,0:29:72.20:0,72,821	0/0:27,0:27:72.21:0,72,831	0/0:46,0:45:99:0,123,1372	0/0:12,0:12:21.06:0,21,242
chr10	46596946	.	TC	T	9172.51	PASS	AB=0.521;AC=21;AF=0.375;AN=56;BaseQRankSum=14.362;DP=665;FS=5.592;HRun=1;HaplotypeScore=77.1088;InbreedingCoeff=0.9231;MQ=91.23;MQ0=0;MQRankSum=-2.845;QD=39.03;ReadPosRankSum=1.082;VQSLOD=5.4759;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,126,2009	0/0:12,0:12:36.10:0,36,549	0/0:28,0:28:84.16:0,84,1219	0/0:32,0:32:84.12:0,84,1070	1/1:0,7:7:18.06:251,18,0	0/0:13,0:13:39.13:0,39,623	0/0:26,0:26:78.25:0,78,1222	1/1:0,35:35:99:1367,99,0	0/0:21,0:21:63.20:0,63,983	1/1:0,33:33:99:1365,99,0	1/1:0,16:16:45.11:607,45,0	0/0:33,0:33:99:0,99,1550	0/0:19,0:19:57.19:0,57,910	1/1:0,26:26:75.25:1048,75,0	0/0:31,0:31:93.29:0,93,1440	0/1:2,23:25:20.63:888,0,21	1/1:0,22:22:60.20:839,60,0	1/1:0,21:21:54.18:755,54,0	0/0:39,0:39:99:0,117,1856	0/0:18,0:18:48.16:0,48,766	0/0:36,0:36:99:0,108,1726	0/0:10,0:10:30.10:0,30,479	0/0:13,0:13:36.11:0,36,552	0/0:29,0:29:87.27:0,87,1343	1/1:0,20:20:57.19:797,57,0	1/1:0,18:18:54.18:754,54,0	0/0:27,0:27:81.26:0,81,1268	1/1:0,12:12:36.12:502,36,0
chr10	46597787	.	TACAC	T	3869.10	PASS	AB=0.733;AC=20;AF=0.385;AN=52;BaseQRankSum=0.517;DP=691;FS=7.139;HRun=0;HaplotypeScore=126.0759;InbreedingCoeff=0.7421;MQ=59.92;MQ0=18;MQRankSum=4.261;QD=13.67;ReadPosRankSum=5.413;VQSLOD=2.5303;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:14,23:38:24.01:331,24,0	0/0:5,0:8:2.74:0,3,13	0/0:35,0:7:0.47:0,0,1	./.	0/0:18,0:19:13.33:0,13,208	1/1:3,0:12:8.83:62,9,0	1/1:9,0:22:15.96:142,16,0	0/0:25,0:22:36.01:0,36,446	1/1:5,12:19:28.44:390,28,0	0/0:14,0:25:41.30:0,41,564	0/0:14,0:14:23.39:0,23,216	1/1:11,12:26:14.99:351,15,0	1/1:11,19:30:36.12:559,36,0	0/0:12,0:25:15.01:0,15,195	0/1:9,2:25:92.71:93,0,214	0/0:10,0:21:12.04:0,12,207	0/0:9,0:25:5.95:0,6,70	0/0:9,0:18:15.05:0,15,234	0/0:15,0:14:24.08:0,24,431	0/0:28,0:29:35.79:0,36,741	0/0:66,1:70:53.97:0,54,2000	1/1:10,14:24:12.05:385,12,0	1/1:4,10:14:21.07:337,21,0	1/1:15,32:48:68.70:1210,69,0	0/0:7,0:20:11.79:0,12,135	0/0:6,0:17:26.61:0,27,403	0/1:20,3:23:9.78:10,0,668	./.
chr10	46599540	.	ACTCTCTCTCTCT	A	1396.79	PASS	AB=0.936;AC=25;AF=0.568;AN=44;BaseQRankSum=1.278;DP=552;FS=26.234;HRun=0;HaplotypeScore=182.8348;InbreedingCoeff=0.0637;MQ=68.86;MQ0=28;MQRankSum=-0.716;QD=4.95;ReadPosRankSum=2.372;VQSLOD=1.3475;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:11,1:15:3.01:75,3,0	1/1:5,3:8:3.01:96,3,0	./.	0/0:49,0:25:0.41:0,0,1	0/1:21,0:21:13.49:13,0,84	1/1:28,0:26:3.01:65,3,0	0/0:27,0:27:7.84:0,8,204	0/0:25,0:25:8.36:0,8,61	1/1:15,5:21:9.03:246,9,0	0/1:17,0:20:13.83:53,0,14	0/0:9,0:8:3.01:0,3,56	0/1:15,7:21:75.82:176,0,76	1/1:15,0:15:2.63:95,3,0	0/1:15,0:15:6.97:7,0,136	0/0:20,1:27:2.60:0,3,22	0/0:23,0:22:9.03:0,9,360	0/1:14,0:13:4.98:5,0,47	0/1:12,0:11:19.69:20,0,20	1/1:17,0:18:6.02:162,6,0	./.	./.	./.	./.	1/1:24,2:24:6.02:160,6,0	./.	0/1:16,0:16:8.30:8,0,43	1/1:9,0:13:9.03:286,9,0	1/1:12,0:8:0.35:64,0,0
chr10	46599595	.	CTGTGTGTGTGTGTGTGTGTGTG	C	510.25	PASS	AB=0.944;AC=14;AF=0.318;AN=44;BaseQRankSum=1.595;DP=1128;FS=9.881;HRun=0;HaplotypeScore=181.5049;InbreedingCoeff=0.3038;MQ=20.50;MQ0=472;MQRankSum=-1.214;QD=1.38;ReadPosRankSum=2.428;VQSLOD=2.3612;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:15:0.47:0,0,2	0/0:11,0:9:0.47:0,0,1	./.	./.	0/0:21,0:16:0:0,0,0	0/0:30,0:18:1.89:0,2,3	1/1:119,0:19:3.15:23,3,0	0/0:26,0:24:1.55:0,2,4	0/0:39,0:26:7.93:0,8,35	1/1:21,0:15:2.94:18,3,0	./.	0/1:40,0:24:0.32:19,0,0	0/1:28,0:18:99:149,0,230	1/1:22,0:13:0.04:1,0,0	1/1:33,0:21:0.61:3,1,0	0/0:24,0:13:0.47:0,0,2	0/0:57,0:15:2.04:0,2,6	0/0:47,0:8:3.48:0,3,230	./.	0/0:19,0:15:0.94:0,1,2	0/0:139,0:27:0.94:0,1,1	./.	0/0:23,0:13:0:0,0,0	0/0:164,0:18:0.47:0,0,1	./.	1/1:34,3:23:14.92:372,15,0	0/0:23,0:15:0.47:0,0,1	1/1:66,0:6:3.91:24,4,0
chr10	46600560	.	A	AC	1564.42	PASS	AB=0.996;AC=21;AF=0.375;AN=56;BaseQRankSum=5.389;DP=668;FS=41.065;HRun=0;HaplotypeScore=113.9491;InbreedingCoeff=0.0001;MQ=63.46;MQ0=11;MQRankSum=7.818;QD=3.64;ReadPosRankSum=0.143;VQSLOD=1.0263;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:25,3:28:22.39:189,22,0	0/0:15,0:15:23.89:0,24,194	0/0:67,0:17:8.11:0,8,189	0/1:65,0:29:17.13:17,0,119	0/1:31,0:31:30.74:31,0,255	0/0:25,0:25:71.47:0,71,531	0/0:16,0:15:43.83:0,44,300	0/1:29,0:28:88.77:89,0,261	1/1:17,0:17:24.42:160,24,0	0/1:25,0:25:39.69:40,0,300	0/1:20,0:20:36.78:37,0,104	0/1:17,1:18:43.54:48,0,44	1/1:18,0:18:23.71:197,24,0	0/1:20,0:20:99:128,0,116	0/0:21,0:21:43.85:0,44,319	0/1:20,0:18:74.45:126,0,74	0/0:16,0:16:17.09:0,17,130	0/0:9,0:8:12.12:0,12,70	0/0:22,0:20:55.53:0,56,409	0/0:22,0:20:50.36:0,50,342	0/0:2,0:2:2.98:0,3,21	1/1:24,0:24:14.38:227,14,0	0/1:31,0:31:11.38:215,0,11	0/1:25,0:25:21.78:83,0,22	0/1:21,0:20:3.69:4,0,137	0/1:29,0:29:99:137,0,221	0/0:23,0:23:66.81:0,67,493	0/1:9,0:8:17.42:17,0,87
chr10	46600565	.	A	AC	3681.16	PASS	AB=0.759;AC=28;AF=0.500;AN=56;BaseQRankSum=4.730;DP=689;FS=46.495;HRun=0;HaplotypeScore=114.3940;InbreedingCoeff=-0.0043;MQ=62.65;MQ0=9;MQRankSum=7.180;QD=7.11;ReadPosRankSum=3.806;VQSLOD=1.5175;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:27:40.07:278,40,0	0/1:4,1:16:11.85:141,0,12	0/0:57,0:14:13.79:0,14,171	0/1:53,0:25:4.09:4,0,129	0/1:18,0:32:35.60:36,0,177	0/0:26,0:26:72.25:0,72,537	0/0:18,0:17:48.48:0,48,336	0/1:17,0:36:99:349,0,114	1/1:19,0:19:44.05:259,44,0	0/1:12,1:35:99:265,0,204	0/1:7,0:23:28.61:120,0,29	0/1:17,0:17:9.12:105,0,9	1/1:21,0:21:26.31:253,26,0	0/1:21,0:21:81.81:161,0,82	0/1:8,11:22:11.45:164,0,11	0/1:22,0:20:23.08:207,0,23	0/1:11,8:19:20.46:20,0,47	1/1:3,0:8:4.99:33,5,0	0/0:22,0:20:58.44:0,58,414	0/0:22,0:20:53.30:0,53,364	0/0:2,0:2:1.25:0,1,3	1/1:25,0:25:48.75:334,49,0	1/1:32,0:32:18.19:341,18,0	1/1:26,0:26:24.90:200,25,0	0/1:8,1:22:25.96:74,0,26	0/1:12,19:32:89.41:289,0,89	0/0:24,0:24:69.36:0,69,480	0/1:5,0:5:13.21:49,0,13
chr10	46601734	.	G	GA	1359.15	PASS	AB=1.000;AC=23;AF=0.639;AN=36;BaseQRankSum=0.230;DP=191;FS=0.000;HRun=6;HaplotypeScore=63.0768;InbreedingCoeff=0.6764;MQ=25.16;MQ0=35;MQRankSum=-0.786;QD=10.38;ReadPosRankSum=-1.081;VQSLOD=0.7651;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	0/0:5,0:4:6.01:0,6,60	./.	./.	1/1:12,5:15:14.95:142,15,0	./.	./.	./.	0/0:8,0:4:5.97:0,6,50	1/1:3,4:5:11.71:124,12,0	1/1:7,1:6:8.75:68,9,0	0/0:11,0:8:15.03:0,15,150	0/1:8,0:3:9.62:10,0,24	1/1:5,1:4:3.01:38,3,0	0/0:5,0:4:9.02:0,9,90	1/1:6,6:10:20.90:240,21,0	./.	1/1:2,1:1:3.01:38,3,0	./.	1/1:8,4:11:16.21:170,16,0	./.	0/0:9,0:7:9.02:0,9,90	0/0:6,0:5:9.01:0,9,90	./.	1/1:11,5:10:22.40:185,22,0	1/1:6,6:7:8.70:87,9,0	1/1:12,6:14:18.06:226,18,0	1/1:9,3:11:22.57:179,23,0
chr10	46601742	.	ACCC	A	662.45	PASS	AB=0.708;AC=9;AF=0.250;AN=36;BaseQRankSum=-5.483;DP=147;FS=0.000;HRun=3;HaplotypeScore=44.2156;InbreedingCoeff=-0.1826;MQ=25.60;MQ0=21;MQRankSum=0.718;QD=8.95;ReadPosRankSum=2.796;VQSLOD=-0.3371;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	0/0:4,0:3:2.93:0,3,18	./.	./.	0/1:5,9:14:6.66:151,0,7	./.	./.	./.	0/0:6,1:3:4.20:0,4,22	0/1:4,4:6:31.75:43,0,32	1/1:1,5:6:1.37:188,1,0	0/0:6,1:5:11.84:0,12,78	0/1:3,3:2:7.96:8,0,14	0/0:2,1:1:2.88:0,3,15	0/0:3,0:3:5.89:0,6,37	0/1:6,1:7:41.76:56,0,42	./.	0/0:1,0:1:2.94:0,3,18	./.	0/1:7,2:9:36.63:37,0,43	./.	0/0:4,0:4:10.83:0,11,59	0/0:4,0:4:8.79:0,9,56	./.	0/1:5,9:10:14.36:244,0,14	0/1:6,4:5:12.15:48,0,12	0/0:6,5:9:13.41:0,13,76	0/0:12,0:11:6.69:0,7,76
chr10	46605135	.	TCACACACACACACACACACACACACACACA	T	969.91	PASS	AC=4;AF=0.074;AN=54;BaseQRankSum=3.968;DP=552;FS=1.621;HRun=0;HaplotypeScore=341.1505;InbreedingCoeff=0.6922;MQ=60.83;MQ0=21;MQRankSum=-2.330;QD=18.65;ReadPosRankSum=-1.665;VQSLOD=0.8836;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:39.11:0,39,2382	1/1:9,4:13:11.88:467,12,0	0/0:39,0:18:6.49:0,6,185	0/0:48,0:32:4.37:0,4,44	0/0:25,0:24:13.87:0,14,912	./.	0/0:2,0:1:3.01:0,3,138	0/0:17,0:16:18.05:0,18,507	0/0:18,0:16:33.11:0,33,2332	0/0:18,0:15:31.91:0,32,1173	0/0:10,0:10:5.99:0,6,409	0/0:19,0:20:19.10:0,19,1217	0/0:18,0:18:26.94:0,27,1435	0/0:11,0:14:27.05:0,27,1658	1/1:21,18:39:9.55:611,10,0	0/0:16,0:22:27.09:0,27,1644	0/0:16,0:17:29.84:0,30,1775	0/0:9,0:11:15.05:0,15,889	0/0:17,0:17:21.53:0,22,1340	0/0:14,0:13:15.05:0,15,1396	0/0:35,0:33:39.61:0,40,3151	0/0:17,0:17:24.08:0,24,1775	0/0:20,0:21:33.10:0,33,2316	0/0:23,0:23:24.54:0,25,1503	0/0:11,0:11:12.04:0,12,920	0/0:22,0:21:29.46:0,29,1359	0/0:12,0:13:21.96:0,22,1734	0/0:5,0:4:12.04:0,12,829
chr10	46605448	.	T	TACATACATACATACAC	9895.90	PASS	AC=22;AF=0.423;AN=52;BaseQRankSum=3.393;DP=795;FS=11.358;HRun=0;HaplotypeScore=355.1401;InbreedingCoeff=0.9692;MQ=50.83;MQ0=14;MQRankSum=-5.032;QD=25.37;ReadPosRankSum=-3.421;VQSLOD=1.4385;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:86.26:0,86,1854	0/0:9,0:9:24.03:0,24,709	0/0:18,0:10:25.88:0,26,237	0/0:22,0:11:21.03:0,21,292	1/1:51,0:51:59.74:695,60,0	./.	./.	1/1:64,0:61:99:2018,151,0	0/0:25,0:25:57.10:0,57,1789	1/1:55,0:55:99:3175,150,0	1/1:27,0:27:30.01:383,30,0	0/0:27,0:27:40.96:0,41,1897	0/0:19,0:18:51.07:0,51,1351	1/1:38,0:38:26.72:339,27,0	0/0:35,0:35:99:0,104,2612	1/1:2,19:48:0.47:1,0,0	1/1:27,0:27:30:402,30,0	1/1:14,0:14:29.77:548,30,0	0/0:20,0:15:35.60:0,36,591	0/0:26,0:26:69.15:0,69,1754	0/0:48,0:48:99:0,114,3480	0/0:20,0:20:54.14:0,54,1549	0/0:25,0:25:65.91:0,66,1353	0/0:24,0:24:66.05:0,66,1410	1/1:25,0:25:23.62:373,24,0	1/1:33,0:33:93.09:1680,93,0	0/0:43,0:42:99:0,126,2796	1/1:7,0:6:15.01:281,15,0
chr10	46605460	.	T	TACAC	285.43	PASS	AB=0.952;AC=6;AF=0.115;AN=52;BaseQRankSum=9.795;DP=773;FS=2.090;HRun=0;HaplotypeScore=215.6093;InbreedingCoeff=-0.1459;MQ=49.67;MQ0=13;MQRankSum=-8.004;QD=1.31;ReadPosRankSum=1.094;VQSLOD=2.8396;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:38:53.03:0,53,1031	0/0:8,0:8:24.07:0,24,389	0/0:19,0:11:24.03:0,24,332	0/0:25,0:15:25.68:0,26,377	0/0:47,0:46:21.47:0,21,296	./.	./.	0/1:60,0:57:79.09:79,0,672	0/0:23,0:23:63.18:0,63,1008	0/1:57,0:57:99:214,0,567	0/0:27,0:27:23.35:0,23,207	0/0:23,0:23:60.18:0,60,983	0/0:20,0:19:54.14:0,54,841	0/0:40,0:40:5.25:0,5,199	0/0:35,0:35:97.53:0,98,1576	0/0:39,0:39:3.41:0,3,49	0/1:18,10:30:46.70:47,0,148	0/1:12,0:12:23.84:24,0,139	0/0:22,0:17:35.97:0,36,422	0/0:23,0:23:52.94:0,53,781	0/0:45,0:45:99:0,108,1582	0/0:19,0:19:48.12:0,48,776	0/0:28,0:28:69.17:0,69,1055	0/0:23,0:23:54.05:0,54,727	0/1:26,0:26:7.59:8,0,80	0/1:33,0:33:33.54:34,0,288	0/0:40,0:39:99:0,102,1609	0/0:7,0:6:5.81:0,6,49
chr10	46606316	.	CA	C	1857.33	PASS	AB=0.744;AC=34;AF=0.654;AN=52;BaseQRankSum=0.152;DP=507;FS=8.997;HRun=15;HaplotypeScore=77.8560;InbreedingCoeff=0.4877;MQ=54.40;MQ0=10;MQRankSum=2.840;QD=5.12;ReadPosRankSum=3.264;VQSLOD=2.0220;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:37:61.37:0,61,406	1/1:1,5:8:15.87:88,16,0	0/1:7,0:5:12.30:12,0,53	0/1:5,1:3:0:0,0,0	1/1:9,11:21:1.87:133,2,0	./.	./.	1/1:13,16:34:10.71:199,11,0	0/0:6,0:17:21.52:0,22,119	0/1:9,4:13:10.36:54,0,10	1/1:6,10:16:28.26:171,28,0	0/0:7,0:21:23.43:0,23,156	0/0:15,0:23:29.48:0,29,200	0/1:12,11:22:12.59:50,0,13	1/1:9,16:24:11.92:175,12,0	0/1:9,12:20:6.16:140,0,6	1/1:9,15:21:35.09:230,35,0	1/1:6,10:15:11.69:77,12,0	1/1:12,1:17:15.79:67,16,0	1/1:12,0:23:22.36:65,22,0	0/1:3,1:11:0.71:36,0,1	0/0:5,0:9:8.64:0,9,47	1/1:4,1:5:2.95:19,3,0	0/0:22,1:34:27.23:0,27,246	1/1:6,8:12:1.91:96,2,0	1/1:13,18:31:23.66:281,24,0	1/1:12,0:29:28.18:82,28,0	1/1:7,3:9:8.82:58,9,0
chr10	46611291	.	AC	A	10872.04	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=15.183;DP=642;FS=3.803;HRun=1;HaplotypeScore=58.9890;InbreedingCoeff=0.9994;MQ=84.13;MQ0=0;MQRankSum=-1.337;QD=37.88;ReadPosRankSum=2.709;VQSLOD=5.5460;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:54.18:0,54,838	0/0:15,0:15:45.15:0,45,704	0/0:20,0:20:60.19:0,60,872	0/0:17,0:17:50.96:0,51,734	1/1:0,30:30:90.12:1170,90,0	0/0:25,0:25:75.22:0,75,1125	0/0:19,0:19:57.18:0,57,865	1/1:0,34:34:99:1360,102,0	0/0:31,0:31:93.32:0,93,1450	1/1:0,30:30:90.26:1220,90,0	1/1:1,26:27:72.13:961,72,0	0/0:21,0:21:63.20:0,63,959	0/0:7,0:7:21.07:0,21,328	1/1:0,26:26:69.23:964,69,0	0/0:17,0:17:51.17:0,51,798	1/1:0,24:24:60.20:839,60,0	1/1:0,20:20:57.19:797,57,0	1/1:0,23:23:57.19:797,57,0	0/0:26,0:26:72.20:0,72,1079	0/0:28,0:28:84.24:0,84,1245	0/0:22,0:22:66.21:0,66,1009	0/0:13,0:13:39.13:0,39,610	0/0:28,0:28:80.98:0,81,1185	0/0:14,0:14:42.13:0,42,632	1/1:0,29:29:78.26:1090,78,0	1/1:0,28:28:84.24:1128,84,0	0/0:34,0:34:99:0,102,1538	1/1:0,16:16:39.13:545,39,0
chr10	46616025	.	AT	A	990.83	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=7.137;DP=597;FS=1.441;HRun=3;HaplotypeScore=56.0594;InbreedingCoeff=0.8561;MQ=71.03;MQ0=0;MQRankSum=1.082;QD=23.59;ReadPosRankSum=1.456;VQSLOD=2.9293;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:84.24:0,84,1121	0/0:13,0:13:39.08:0,39,491	0/1:9,0:9:1.15:1,0,129	0/0:9,0:8:20.91:0,21,191	0/0:30,0:30:87.25:0,87,1166	1/1:2,16:18:45.14:556,45,0	1/1:0,15:15:45.14:556,45,0	0/0:31,0:31:87.25:0,87,1130	0/0:12,0:12:36.12:0,36,504	0/0:29,0:29:87.19:0,87,1150	0/0:29,0:29:87.24:0,87,1148	0/0:31,0:31:93.22:0,93,1170	0/0:17,0:17:48.13:0,48,637	0/0:18,0:18:45.11:0,45,577	0/0:25,0:25:75.17:0,75,997	0/0:24,0:24:66.22:0,66,921	0/0:23,0:23:69.14:0,69,872	0/0:19,0:19:50.94:0,51,665	0/0:16,0:16:42.08:0,42,550	0/0:42,0:42:99:0,126,1672	0/0:5,0:5:15.04:0,15,193	0/0:26,0:26:78.22:0,78,1039	0/0:15,0:15:45.13:0,45,596	0/0:9,0:9:24.05:0,24,301	0/0:31,0:31:93.21:0,93,1168	0/0:35,0:35:99:0,99,1284	0/0:25,0:25:72.24:0,72,1003	0/0:13,0:13:39.13:0,39,544
chr10	46616243	.	TTCAG	T	1656.52	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.002;DP=834;FS=0.656;HRun=0;HaplotypeScore=135.8910;InbreedingCoeff=0.9005;MQ=73.49;MQ0=2;MQRankSum=0.327;QD=29.58;ReadPosRankSum=4.050;VQSLOD=3.5121;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,102,2321	1/1:3,7:10:12.04:208,12,0	0/0:43,0:37:93.12:0,93,1957	0/0:50,0:39:53.43:0,53,1064	0/0:26,0:26:69.24:0,69,1684	0/0:16,0:16:39.13:0,39,958	0/0:37,0:37:93.29:0,93,2124	0/0:43,0:43:99:0,99,2322	0/0:24,0:24:57.19:0,57,1417	0/0:30,0:30:84.29:0,84,2009	0/0:14,0:14:33.11:0,33,777	0/0:46,0:46:99:0,135,3146	0/0:33,0:33:87.30:0,87,2044	0/0:29,0:29:81.25:0,81,1889	1/1:8,38:46:90.31:1564,90,0	0/0:41,0:41:99:0,108,2589	0/0:26,0:26:72.18:0,72,1738	0/0:24,0:24:63.17:0,63,1492	0/0:25,0:25:63.16:0,63,1212	0/0:13,0:13:39.13:0,39,908	0/0:60,0:60:99:0,153,3588	0/0:20,0:20:45.15:0,45,1080	0/0:24,0:24:66.23:0,66,1573	0/0:35,0:35:96.31:0,96,2262	0/0:19,0:19:45.15:0,45,1090	0/0:23,0:23:66.22:0,66,1552	0/0:33,0:33:81.26:0,81,1964	0/0:4,0:4:3.01:0,3,76
chr10	46622788	.	T	TAC	3405.75	PASS	AB=0.730;AC=44;AF=0.846;AN=52;BaseQRankSum=-0.957;DP=542;FS=10.954;HRun=0;HaplotypeScore=106.4638;InbreedingCoeff=-0.0130;MQ=55.05;MQ0=4;MQRankSum=-1.400;QD=7.19;ReadPosRankSum=1.881;VQSLOD=2.5520;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:29:16.72:139,17,0	1/1:4,0:11:6.88:54,7,0	./.	./.	1/1:10,1:11:6.02:87,6,0	0/1:15,9:24:21.22:124,0,21	0/1:16,8:25:31.75:248,0,32	1/1:28,0:27:15.40:124,15,0	0/0:24,0:23:29.47:0,29,216	1/1:12,5:17:10.80:138,11,0	1/1:8,0:8:6.02:80,6,0	1/1:15,0:17:14.88:128,15,0	1/1:12,1:16:6.90:47,7,0	1/1:12,13:27:20.94:315,21,0	1/1:20,0:25:8.97:78,9,0	1/1:11,8:19:12.51:181,13,0	0/1:11,7:20:27.27:163,0,27	1/1:8,10:19:18.06:272,18,0	1/1:21,0:21:3:27,3,0	0/1:6,7:13:21.19:123,0,21	0/1:15,7:22:18.10:166,0,18	1/1:7,0:10:3:26,3,0	1/1:14,0:12:3:26,3,0	1/1:17,0:23:9:78,9,0	1/1:11,9:21:9.03:135,9,0	1/1:13,12:25:16.42:395,16,0	0/1:18,5:23:17.75:167,0,18	1/1:2,1:3:6.02:83,6,0
chr10	46622951	.	C	CATGT	10036	PASS	AB=0.748;AC=30;AF=0.577;AN=52;BaseQRankSum=-10.899;DP=798;FS=5.078;HRun=0;HaplotypeScore=146.5444;InbreedingCoeff=0.5203;MQ=67.33;MQ0=13;MQRankSum=3.069;QD=18.79;ReadPosRankSum=-1.786;VQSLOD=3.8113;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:31,15:45:10.99:674,0,11	0/0:13,0:19:18.02:0,18,168	./.	./.	1/1:14,11:24:21.07:491,21,0	0/0:8,0:22:33.04:0,33,308	0/0:17,0:24:8.98:0,9,77	1/1:35,0:34:9.01:150,9,0	0/0:23,0:23:36.09:0,36,531	1/1:21,19:41:63.19:1360,63,0	1/1:12,9:20:18.06:422,18,0	1/1:18,0:24:9.03:156,9,0	0/1:23,10:33:19.30:523,0,19	0/1:19,21:40:4.24:872,0,4	0/0:13,0:41:71.22:0,71,621	1/1:14,11:28:24.08:560,24,0	1/1:13,9:22:18.05:419,18,0	0/1:20,0:20:26.79:27,0,207	0/0:14,0:14:12.03:0,12,167	0/1:13,14:28:99:719,0,119	0/0:40,0:40:60.19:0,60,905	1/1:17,7:24:21.07:479,21,0	1/1:13,11:24:11.80:281,12,0	1/1:18,14:33:36.12:844,36,0	0/1:19,18:35:1.24:940,0,1	1/1:20,16:35:45.15:1047,45,0	0/0:32,0:32:36.09:0,36,531	1/1:5,6:11:3.01:70,3,0
chr10	46623167	.	C	CACACATGGTATAT	51396.90	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-7.175;DP=621;FS=1.591;HRun=0;HaplotypeScore=159.7830;InbreedingCoeff=0.8689;MQ=60.16;MQ0=0;MQRankSum=-8.900;QD=89.39;ReadPosRankSum=4.589;VQSLOD=4.8728;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,16:34:27.05:1495,27,0	1/1:4,10:15:30.10:1769,30,0	0/0:27,0:26:60.17:0,60,1659	0/0:19,0:18:30.10:0,30,793	1/1:9,21:34:51.04:2846,51,0	1/1:10,12:25:42.10:2253,42,0	1/1:6,6:15:21.07:1252,21,0	1/1:37,0:36:90.28:3460,90,0	1/1:9,17:26:51.13:2781,51,0	1/1:10,15:27:48.16:2460,48,0	1/1:8,14:26:39.09:2190,39,0	1/1:4,11:18:30.10:1730,30,0	1/1:4,16:24:39.13:2502,39,0	1/1:5,14:20:33.07:1826,33,0	1/1:5,18:26:45.15:2663,45,0	1/1:6,13:22:39.09:2228,39,0	1/1:5,7:13:17.85:723,18,0	1/1:7,7:15:14.49:1444,14,0	1/1:11,14:26:69.14:2936,69,0	1/1:10,12:24:27.09:1749,27,0	1/1:4,4:10:6.02:390,6,0	1/1:5,16:23:42.10:2321,42,0	1/1:4,6:10:9.03:584,9,0	1/1:3,8:11:9.03:584,9,0	1/1:9,22:34:48.16:2833,48,0	1/1:6,14:24:51.15:2419,51,0	1/1:6,23:32:54.19:3395,54,0	1/1:4,0:4:12.03:564,12,0
chr10	46623746	.	G	GA	427.60	PASS	AB=0.934;AC=7;AF=0.125;AN=56;BaseQRankSum=-2.694;DP=573;FS=0.746;HRun=10;HaplotypeScore=68.2687;InbreedingCoeff=0.2234;MQ=70.16;MQ0=1;MQRankSum=0.323;QD=4.41;ReadPosRankSum=-5.075;VQSLOD=-0.4515;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:62.92:0,63,517	0/0:11,0:11:23.70:0,24,196	0/0:21,0:20:33.85:0,34,257	0/1:14,0:11:15.28:15,0,17	0/0:20,0:21:49.96:0,50,397	0/0:21,0:21:47.91:0,48,394	0/0:23,0:24:52.93:0,53,421	1/1:11,12:24:47.16:496,47,0	0/0:16,0:16:38.94:0,39,320	0/0:22,1:23:28.19:0,28,456	0/0:19,0:19:47.91:0,48,394	0/0:17,0:17:41.91:0,42,345	0/0:17,0:17:44.94:0,45,369	0/0:26,0:26:62.91:0,63,517	0/0:24,0:25:70.94:0,71,572	0/0:18,0:18:38.92:0,39,320	0/0:25,0:29:56.06:0,56,417	0/0:25,0:26:64.97:0,65,523	0/1:11,1:12:5.02:5,0,170	0/1:24,2:26:16.74:17,0,294	0/1:8,1:9:17.01:17,0,84	0/0:17,1:19:17.99:0,18,343	0/1:10,1:11:5.01:5,0,170	0/0:22,0:22:47.90:0,48,394	0/0:23,0:23:53.91:0,54,443	0/0:30,0:29:74.89:0,75,615	0/0:31,1:31:42.95:0,43,556	0/0:11,0:11:32.94:0,33,267
chr10	46623800	.	G	GA	2096.79	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=-5.966;DP=595;FS=2.227;HRun=7;HaplotypeScore=124.2386;InbreedingCoeff=0.7792;MQ=61.13;MQ0=7;MQRankSum=1.248;QD=19.41;ReadPosRankSum=0.030;VQSLOD=2.2205;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:24:3.41:3,0,171	0/0:8,0:8:23.71:0,24,201	0/0:21,0:13:17.90:0,18,146	0/0:43,0:19:14.60:0,15,134	0/0:38,0:38:53.79:0,54,489	0/0:20,0:20:8.62:0,9,159	0/0:20,0:20:50.73:0,51,468	0/0:28,0:28:63.10:0,63,608	0/0:19,0:19:45.02:0,45,421	0/0:28,0:28:56.98:0,57,508	0/0:18,0:18:24.03:0,24,232	0/0:17,0:17:51.08:0,51,491	0/0:20,0:20:57.08:0,57,545	0/0:25,0:25:29.98:0,30,270	0/0:24,0:23:49.44:0,49,338	0/0:13,0:13:24.01:0,24,222	0/0:14,0:14:37.28:0,37,340	0/0:18,0:18:5.42:0,5,170	1/1:4,12:16:39:413,39,0	1/1:2,25:27:75.20:890,75,0	1/1:6,0:6:5.95:42,6,0	0/0:22,0:22:60.09:0,60,579	0/0:14,0:14:39.06:0,39,376	0/0:19,0:19:44.73:0,45,413	0/0:19,0:19:18.03:0,18,174	0/0:27,0:25:53.96:0,54,474	1/1:4,31:34:75.23:902,75,0	0/0:9,0:9:1.73:0,2,167
chr10	46623804	.	A	AAAAGAAAG	875.13	PASS	AB=1.000;AC=17;AF=0.340;AN=50;BaseQRankSum=2.873;DP=577;FS=6.210;HRun=0;HaplotypeScore=191.0349;InbreedingCoeff=0.4192;MQ=59.74;MQ0=8;MQRankSum=-3.061;QD=4.23;ReadPosRankSum=-5.828;VQSLOD=0.0507;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,0:25:29.65:249,30,0	0/1:8,0:10:9.21:9,0,103	./.	./.	0/1:39,0:39:49.71:50,0,71	1/1:6,12:20:9.03:364,9,0	1/1:20,0:20:12.01:149,12,0	./.	0/0:19,0:19:33.08:0,33,618	0/0:29,0:29:4.50:0,4,388	1/1:15,0:15:11.01:40,11,0	0/0:17,0:17:30.10:0,30,683	0/0:20,0:20:30.09:0,30,645	0/1:24,0:24:12.23:12,0,201	0/0:9,0:21:30.10:0,30,535	0/1:13,0:13:6.76:7,0,99	0/0:12,0:12:6.02:0,6,112	0/0:18,0:18:1.24:0,1,157	0/1:17,0:17:68.58:69,0,107	0/0:28,0:27:57.11:0,57,716	1/1:1,0:7:6.02:84,6,0	0/0:23,0:23:42.14:0,42,921	0/0:14,0:14:27.08:0,27,523	0/0:17,0:17:21.92:0,22,435	1/1:17,0:17:2.50:9,2,0	0/0:27,0:25:17.17:0,17,534	0/0:34,0:33:50.62:0,51,686	0/0:8,0:8:9.03:0,9,168
chr10	46623828	.	GAAAGAAAGAAAGAAAGAA	G	12676.86	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=9.105;DP=546;FS=13.688;HRun=0;HaplotypeScore=233.6760;InbreedingCoeff=0.8735;MQ=52.77;MQ0=20;MQRankSum=-5.471;QD=51.32;ReadPosRankSum=-1.260;VQSLOD=2.7711;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:54.18:0,54,3293	0/1:8,0:8:48.39:48,0,812	0/0:7,0:4:12.04:0,12,165	0/0:7,0:1:3.01:0,3,63	1/1:4,39:42:96.32:2404,96,0	0/0:26,0:26:45.15:0,45,2158	0/0:20,0:20:60.20:0,60,2131	1/1:25,0:23:54.13:1021,54,0	0/0:15,0:15:45.15:0,45,2796	1/1:4,24:27:60.19:2139,60,0	1/1:8,5:11:27.08:769,27,0	0/0:14,0:15:45.15:0,45,3290	0/0:19,0:19:57.18:0,57,3110	1/1:3,19:19:24.34:999,24,0	0/0:25,0:24:63.22:0,63,2497	1/1:5,10:13:12.04:500,12,0	1/1:11,2:11:20.90:698,21,0	1/1:0,19:19:15.05:698,15,0	0/0:17,0:13:39.13:0,39,1448	0/0:29,0:28:81.28:0,81,5055	0/0:10,0:10:21.07:0,21,797	0/0:19,0:19:57.20:0,57,4164	0/0:17,0:17:51.17:0,51,2807	0/0:18,0:18:48.16:0,48,2562	1/1:3,20:22:6.02:164,6,0	1/1:4,21:23:54.17:2082,54,0	0/0:29,0:28:75.73:0,76,4984	1/1:10,3:13:18.46:1153,18,0
chr10	46623844	.	GAA	G	4782.09	PASS	AB=0.889;AC=23;AF=0.411;AN=56;BaseQRankSum=13.928;DP=547;FS=29.032;HRun=3;HaplotypeScore=118.8880;InbreedingCoeff=0.8753;MQ=61.28;MQ0=18;MQRankSum=-5.718;QD=20.79;ReadPosRankSum=3.893;VQSLOD=1.5193;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:72.22:0,72,966	0/1:7,1:8:35.99:36,0,116	0/0:13,0:12:35.99:0,36,476	0/0:4,0:2:6.02:0,6,86	1/1:39,1:39:81.24:1095,81,0	0/0:28,0:28:51.15:0,51,701	0/0:22,0:22:65.76:0,66,896	1/1:1,27:22:63.16:911,63,0	0/0:15,0:15:45.15:0,45,824	1/1:24,3:24:57.07:661,57,0	1/1:7,4:9:27.08:342,27,0	0/0:17,0:17:51.16:0,51,870	0/0:17,0:17:48.16:0,48,830	1/1:21,1:19:23.96:248,24,0	0/0:25,0:25:16.37:0,16,483	1/1:10,2:10:12.01:123,12,0	1/1:7,5:10:30.07:386,30,0	1/1:19,0:19:12:108,12,0	0/0:22,0:19:54.15:0,54,815	0/0:28,0:27:81.22:0,81,1435	0/0:12,0:12:30.04:0,30,395	0/0:20,0:20:60.21:0,60,1097	0/0:17,0:17:51.17:0,51,864	0/0:16,0:16:36.96:0,37,713	1/1:20,1:20:3.01:36,3,0	1/1:21,0:20:51.03:547,51,0	0/0:29,0:28:75.26:0,75,1343	1/1:9,0:9:26.84:289,27,0
chr10	46623846	.	A	AAG	4571.06	PASS	AB=1.000;AC=24;AF=0.429;AN=56;BaseQRankSum=9.295;DP=549;FS=50.554;HRun=0;HaplotypeScore=120.5197;InbreedingCoeff=0.7305;MQ=62.18;MQ0=17;MQRankSum=-1.916;QD=17.31;ReadPosRankSum=0.985;VQSLOD=2.8589;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:32,0:32:62.58:63,0,438	0/1:8,0:8:21.60:22,0,199	0/0:13,0:12:35.99:0,36,476	0/0:5,0:3:6.02:0,6,86	1/1:40,0:39:73.70:1198,74,0	0/0:27,0:27:11.65:0,12,414	0/0:23,0:23:62.97:0,63,762	1/1:28,0:21:63.16:911,63,0	0/0:15,0:15:45.15:0,45,644	1/1:27,0:24:20.76:506,21,0	1/1:9,2:9:27.09:460,27,0	0/0:18,0:18:51.14:0,51,693	0/0:16,0:16:48.16:0,48,680	1/1:21,2:20:6.44:206,6,0	0/0:26,0:26:66.01:0,66,744	1/1:12,0:10:3.42:103,3,0	1/1:10,2:10:21.51:370,22,0	1/1:20,0:20:1.72:61,2,0	0/0:20,0:18:52.57:0,53,679	0/0:28,0:27:81.22:0,81,1134	0/0:12,0:12:26.51:0,27,295	0/0:20,0:20:60.20:0,60,858	0/0:17,0:17:51.16:0,51,713	0/0:16,0:16:42.14:0,42,601	1/1:21,0:20:3.01:54,3,0	1/1:21,0:20:9.55:318,10,0	0/0:29,0:28:75.17:0,75,1072	1/1:3,6:9:14.22:301,14,0
chr10	46623937	.	AC	A	5229.24	PASS	AB=0.859;AC=33;AF=0.589;AN=56;BaseQRankSum=-0.111;DP=459;FS=2.622;HRun=10;HaplotypeScore=57.0856;InbreedingCoeff=0.6238;MQ=82.89;MQ0=1;MQRankSum=-1.715;QD=15.89;ReadPosRankSum=2.977;VQSLOD=5.3236;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:21,3:24:36.04:36,0,315	1/1:3,7:10:14.99:130,15,0	0/0:17,0:16:19.87:0,20,199	0/1:13,0:13:7.47:7,0,94	1/1:13,16:29:58.96:493,59,0	1/1:7,13:20:23.63:365,24,0	1/1:2,19:21:50.98:443,51,0	1/1:9,13:22:38.98:338,39,0	0/1:8,1:9:4.09:4,0,170	1/1:11,14:25:53.96:466,54,0	0/1:5,13:18:21.22:293,0,21	0/0:19,1:20:16.06:0,16,405	0/0:17,0:17:36.10:0,36,395	1/1:4,10:14:38.98:338,39,0	1/1:6,9:15:35.98:312,36,0	1/1:2,7:9:21:182,21,0	1/1:5,17:22:47.98:417,48,0	1/1:2,8:10:23.99:208,24,0	0/0:13,0:18:20.46:0,20,142	0/0:7,0:7:6.46:0,6,51	0/0:9,0:14:17.92:0,18,163	0/1:11,1:12:4.98:5,0,178	0/0:11,2:14:0.89:0,1,220	0/0:12,0:12:33.08:0,33,358	1/1:6,9:15:35.97:306,36,0	1/1:6,15:21:47.98:416,48,0	0/0:5,0:11:13.98:0,14,72	1/1:2,18:20:53.98:469,54,0
chr10	46627124	.	TCC	T	804.66	PASS	AB=0.976;AC=34;AF=0.654;AN=52;BaseQRankSum=-5.139;DP=380;FS=0.866;HRun=3;HaplotypeScore=130.8053;InbreedingCoeff=0.0234;MQ=28.85;MQ0=48;MQRankSum=-0.052;QD=2.48;ReadPosRankSum=-0.246;VQSLOD=-0.6544;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:25,1:23:18.56:22,0,19	0/0:5,0:4:4.98:0,5,24	./.	./.	0/0:10,0:9:0.35:0,0,1	1/1:3,6:8:2.42:44,2,0	1/1:5,7:11:1.84:74,2,0	1/1:23,0:17:14.50:62,15,0	0/1:11,0:10:10.25:10,0,45	1/1:26,1:24:15.70:145,16,0	0/0:15,0:15:1.67:0,2,6	0/0:13,0:13:4.72:0,5,77	0/1:11,0:11:10.88:45,0,11	1/1:11,2:13:3.34:40,3,0	1/1:14,1:14:8.43:97,8,0	0/1:13,1:13:13.35:13,0,45	0/1:9,1:10:1.12:98,0,1	1/1:11,0:10:9.33:41,9,0	1/1:15,0:10:1.82:11,2,0	1/1:12,0:12:4.41:17,4,0	1/1:15,0:11:4.05:26,4,0	0/1:20,0:16:9.81:45,0,10	1/1:11,2:10:1.80:10,2,0	0/1:10,0:8:3.26:3,0,41	1/1:17,0:16:0.60:6,1,0	0/1:25,0:18:18.91:48,0,19	0/0:12,0:11:0.30:0,0,47	1/1:15,0:8:9.58:82,10,0
chr10	46627134	.	T	TC	59.20	PASS	AB=0.974;AC=10;AF=0.192;AN=52;BaseQRankSum=7.162;DP=352;FS=9.027;HRun=3;HaplotypeScore=130.5822;InbreedingCoeff=0.0738;MQ=27.05;MQ0=58;MQRankSum=-0.197;QD=0.48;ReadPosRankSum=0.896;VQSLOD=-0.7612;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,1:17:8.95:0,9,99	0/0:4,0:5:4.83:0,5,17	./.	./.	0/1:8,0:7:0.32:0,0,0	0/1:9,0:7:5.60:6,0,22	0/1:11,1:10:33.91:34,0,38	0/0:21,0:15:36.01:0,36,426	0/0:10,0:9:11.17:0,11,89	0/0:24,0:21:2.20:0,2,392	0/1:13,0:13:1.66:2,0,10	0/0:12,0:12:20.52:0,21,193	0/0:9,0:9:14.17:0,14,160	0/0:12,0:12:3.55:0,4,11	0/1:7,0:7:2.05:2,0,28	0/0:12,1:12:19.84:0,20,173	0/0:8,0:7:12.45:0,12,122	0/0:9,0:7:11.95:0,12,129	0/0:17,0:9:15.48:0,15,167	0/0:10,3:13:3.57:0,4,15	0/0:16,0:12:6.42:0,6,44	0/1:19,2:17:6.10:6,0,37	0/1:14,0:10:4.61:5,0,5	0/0:11,0:8:5.63:0,6,73	1/1:16,0:16:8.03:104,8,0	0/1:22,1:16:14.61:15,0,290	0/0:12,1:12:3.19:0,3,149	0/0:14,0:6:18.05:0,18,220
chr10	46627139	.	C	CCA	243.89	PASS	AB=0.980;AC=14;AF=0.269;AN=52;BaseQRankSum=6.020;DP=347;FS=4.578;HRun=0;HaplotypeScore=146.5052;InbreedingCoeff=0.0643;MQ=26.88;MQ0=61;MQRankSum=-1.239;QD=1.78;ReadPosRankSum=0.983;VQSLOD=2.5545;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:18:25.64:0,26,193	0/0:6,0:5:0.47:0,0,2	./.	./.	1/1:8,1:8:3.48:45,3,0	0/1:9,0:7:8.83:9,0,14	0/1:12,0:10:5.24:5,0,27	0/0:18,0:13:36.96:0,37,503	0/0:10,0:9:11.46:0,11,124	0/0:24,0:22:35.20:0,35,561	1/1:10,1:11:0.73:9,1,0	0/0:13,0:13:19.47:0,19,215	0/0:10,0:10:13.57:0,14,204	0/1:11,0:11:11.86:21,0,12	0/0:8,0:6:8.14:0,8,51	0/1:11,0:10:7.40:7,0,156	0/1:8,0:6:6.15:6,0,117	0/0:10,0:7:9.02:0,9,124	0/0:13,0:6:15.01:0,15,186	1/1:10,1:11:1.44:48,1,0	0/0:17,0:13:5.34:0,5,27	0/0:20,0:16:15.90:0,16,74	0/1:15,0:10:11.77:23,0,12	0/0:11,0:8:2.70:0,3,48	0/1:13,2:15:11.35:135,0,11	0/1:24,1:18:71.60:72,0,349	0/0:13,0:12:10.91:0,11,266	0/0:15,0:6:18.04:0,18,266
chr10	46627148	.	T	TC	273.15	PASS	AB=0.962;AC=17;AF=0.327;AN=52;BaseQRankSum=5.565;DP=318;FS=0.000;HRun=3;HaplotypeScore=126.1926;InbreedingCoeff=-0.1661;MQ=26.43;MQ0=60;MQRankSum=-1.047;QD=1.42;ReadPosRankSum=1.926;VQSLOD=-0.2801;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:18,3:18:12.85:13,0,146	0/0:7,0:5:0:0,0,0	./.	./.	0/1:10,0:9:0.20:0,0,1	0/1:10,0:7:3.73:21,0,4	0/1:10,1:8:20.77:21,0,38	0/0:11,0:8:24.03:0,24,263	0/1:10,0:9:6.90:7,0,99	0/1:21,0:19:57.18:57,0,143	0/0:9,0:9:6.08:0,6,49	0/0:13,0:13:19.77:0,20,182	0/1:8,1:9:6.93:7,0,103	0/1:8,1:9:19.56:20,0,34	0/0:9,0:7:3.26:0,3,36	0/1:11,0:10:21.90:22,0,155	0/1:8,0:6:4.83:5,0,95	0/0:11,0:7:12.03:0,12,138	0/0:18,0:9:4.63:0,5,111	0/0:11,0:10:11.29:0,11,52	0/0:13,0:10:5.88:0,6,59	0/1:16,0:13:3.04:3,0,31	1/1:12,0:8:3.20:27,3,0	0/0:9,0:6:2.66:0,3,33	1/1:13,0:13:1.05:119,1,0	0/1:22,0:15:53.27:53,0,211	0/1:9,1:9:32.85:33,0,69	0/0:14,0:6:15.04:0,15,165
chr10	46627149	.	CCCT	C	342.06	PASS	AB=0.925;AC=17;AF=0.327;AN=52;BaseQRankSum=4.220;DP=313;FS=0.000;HRun=0;HaplotypeScore=117.7737;InbreedingCoeff=-0.3089;MQ=26.35;MQ0=60;MQRankSum=-0.529;QD=1.68;ReadPosRankSum=1.582;VQSLOD=1.8893;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:21,0:18:26.07:26,0,277	0/0:7,0:5:0.41:0,0,1	./.	./.	0/0:9,1:9:0.66:0,1,3	0/1:9,1:7:19.33:19,0,67	0/1:9,0:6:30.13:30,0,74	0/0:11,0:8:23.86:0,24,298	0/0:10,0:9:17.85:0,18,221	0/1:16,4:18:51.43:51,0,295	0/1:7,2:9:0.99:1,0,46	0/1:13,0:13:11.83:12,0,185	0/1:9,0:9:12.76:13,0,161	0/1:8,1:9:37.58:38,0,46	0/0:9,0:7:7.46:0,7,96	0/1:9,1:9:9.34:9,0,267	0/1:8,0:6:19.10:19,0,155	0/0:11,0:7:12.04:0,12,177	0/1:18,0:9:2.85:3,0,190	0/1:11,0:10:0.60:1,0,26	0/0:14,0:11:4.61:0,5,58	0/0:14,1:12:8.95:0,9,65	1/1:9,3:8:4.57:43,5,0	0/0:9,0:6:3.48:0,3,52	0/1:7,6:13:29.13:130,0,29	0/1:20,2:15:27.61:28,0,305	0/1:9,1:9:56.66:57,0,79	0/0:13,0:5:15.05:0,15,261
chr10	46627152	.	T	TC	540.48	PASS	AB=0.952;AC=21;AF=0.404;AN=52;BaseQRankSum=5.451;DP=293;FS=0.000;HRun=3;HaplotypeScore=111.6403;InbreedingCoeff=-0.2875;MQ=26.17;MQ0=58;MQRankSum=-0.255;QD=2.60;ReadPosRankSum=0.707;VQSLOD=-0.1699;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:17,3:18:45.52:46,0,175	0/0:6,0:4:0.47:0,0,1	./.	./.	0/1:9,0:8:0.53:1,0,1	0/1:10,0:7:21.28:21,0,24	0/1:8,1:6:26.55:27,0,36	0/0:11,0:8:19.61:0,20,237	0/0:10,0:9:3.04:0,3,130	0/1:17,0:15:78.41:78,0,101	0/1:8,0:8:5.66:6,0,45	0/1:10,1:11:29.16:29,0,152	0/1:9,1:10:13.20:13,0,101	0/1:7,1:8:37.47:37,0,60	0/1:9,0:7:9.88:10,0,33	0/0:10,0:9:1.64:0,2,160	0/1:8,0:6:8.29:8,0,86	0/0:11,0:7:12.03:0,12,141	0/1:16,1:9:34.97:35,0,107	1/1:9,0:8:2.31:22,2,0	0/0:14,1:12:1.29:0,1,20	0/1:12,0:9:4.82:5,0,22	1/1:9,0:5:5.35:66,5,0	0/0:9,0:6:2.65:0,3,38	1/1:11,0:11:2.39:140,2,0	0/1:21,0:14:77.12:77,0,148	0/1:8,1:8:7.09:57,0,7	0/0:13,0:6:15.04:0,15,174
chr10	46627167	.	CCCT	C	197.57	PASS	AB=0.977;AC=18;AF=0.360;AN=50;BaseQRankSum=0.676;DP=199;FS=0.000;HRun=0;HaplotypeScore=83.0577;InbreedingCoeff=-0.0971;MQ=27.37;MQ0=33;MQRankSum=-0.177;QD=1.57;ReadPosRankSum=-4.286;VQSLOD=0.5110;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:15,1:14:34.43:65,0,34	./.	./.	./.	1/1:6,0:6:0.66:7,1,0	0/1:8,0:7:12.47:24,0,12	0/1:7,0:5:5.19:5,0,14	0/1:9,0:8:49.34:49,0,92	0/1:4,1:5:24.21:31,0,24	0/1:10,0:10:5.64:9,0,6	0/0:6,0:6:8.66:0,9,48	0/0:10,0:10:2.41:0,2,34	0/0:6,0:6:8.07:0,8,54	0/0:5,0:5:5.17:0,5,38	0/1:6,0:5:3.92:4,0,11	1/1:7,1:7:5.82:42,6,0	0/0:5,0:3:5.75:0,6,44	0/0:4,0:1:3.01:0,3,38	0/0:11,0:6:7.77:0,8,109	0/0:7,0:6:6.62:0,7,30	1/1:10,0:8:1.57:9,2,0	0/1:10,0:7:18.09:18,0,20	1/1:8,0:4:5.31:25,5,0	0/0:5,0:3:0.47:0,0,2	0/1:7,0:7:20.28:31,0,20	0/1:16,0:12:11.22:11,0,72	0/0:6,0:6:0.95:0,1,23	0/0:5,1:3:3:0,3,25
chr10	46627168	.	C	CCCAT	938.28	PASS	AB=0.938;AC=18;AF=0.360;AN=50;BaseQRankSum=2.639;DP=188;FS=0.000;HRun=0;HaplotypeScore=82.8207;InbreedingCoeff=-0.0526;MQ=27.71;MQ0=29;MQRankSum=0.863;QD=7.88;ReadPosRankSum=1.730;VQSLOD=1.9450;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:14,0:13:49.17:50,0,49	./.	./.	./.	1/1:5,0:5:3.95:52,4,0	0/0:8,0:7:1.04:0,1,2	0/0:6,0:4:7.98:0,8,32	0/0:11,0:10:6.07:0,6,212	0/0:5,0:5:3.98:0,4,26	0/1:8,0:8:5.70:84,0,6	0/1:6,0:6:41.50:93,0,41	0/1:5,0:9:39.06:46,0,39	0/1:5,1:6:26.18:44,0,26	0/0:4,0:4:6.07:0,6,45	0/0:6,0:5:4.06:0,4,18	0/1:7,1:7:0.53:74,0,1	0/0:4,0:3:5.52:0,6,25	0/0:4,0:1:3.01:0,3,56	0/1:10,0:6:19.12:19,0,124	1/1:5,0:4:9:152,9,0	1/1:9,0:8:1.32:10,1,0	1/1:8,1:7:11.02:150,11,0	0/0:8,0:4:0.29:0,0,1	0/0:5,0:3:1.04:0,1,3	0/1:7,0:7:13.24:82,0,13	0/1:15,1:12:74.60:212,0,75	0/1:6,0:6:8.70:9,0,48	0/0:6,0:3:2.68:0,3,11
chr10	46627170	.	T	TCC	1596.15	PASS	AB=0.977;AC=40;AF=0.800;AN=50;BaseQRankSum=1.044;DP=183;FS=0.000;HRun=3;HaplotypeScore=75.7117;InbreedingCoeff=0.1717;MQ=28.00;MQ0=25;MQRankSum=2.047;QD=9.67;ReadPosRankSum=-0.026;VQSLOD=0.1186;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:13:13.84:173,14,0	./.	./.	./.	1/1:5,0:5:2.88:15,3,0	0/1:8,0:7:1.76:58,0,2	1/1:5,1:4:7.84:98,8,0	1/1:4,6:10:0.68:95,1,0	1/1:5,0:5:9.78:100,10,0	1/1:2,4:8:13.56:151,14,0	1/1:6,0:6:1.09:39,1,0	1/1:8,1:9:3.75:73,4,0	1/1:6,0:6:5.17:21,5,0	0/1:4,0:4:0.75:1,0,1	1/1:6,0:5:4.12:82,4,0	1/1:7,0:6:17.98:215,18,0	1/1:2,2:3:5.75:70,6,0	0/0:4,0:1:2.04:0,2,6	0/1:9,1:6:2.69:34,0,3	1/1:5,0:4:4.93:41,5,0	1/1:9,0:8:3.01:49,3,0	1/1:10,0:7:1.94:118,2,0	0/0:7,0:4:0.51:0,1,2	0/0:5,0:3:1.89:0,2,7	1/1:7,0:7:10.08:68,10,0	1/1:14,1:12:5.51:126,6,0	0/1:6,0:6:3.17:3,0,5	1/1:4,1:3:4.83:63,5,0
chr10	46627178	.	C	CT	32.59	PASS	AB=0.917;AC=18;AF=0.391;AN=46;BaseQRankSum=2.235;DP=129;FS=0.000;HRun=0;HaplotypeScore=66.5148;InbreedingCoeff=0.2774;MQ=29.60;MQ0=9;MQRankSum=0.379;QD=0.51;ReadPosRankSum=1.948;VQSLOD=1.0256;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,6:11:3.20:9,3,0	./.	./.	./.	1/1:1,1:2:0.47:1,0,0	1/1:5,1:5:1.55:4,2,0	1/1:6,0:4:2.90:16,3,0	0/0:8,0:8:8.62:0,9,89	1/1:3,0:3:1.25:3,1,0	0/1:8,0:8:6.44:34,0,6	1/1:4,0:4:0.42:0,0,0	0/0:8,0:8:2.92:0,3,9	0/0:4,0:4:0.89:0,1,2	./.	0/0:1,2:3:0.83:0,1,13	1/1:3,3:5:7.20:33,7,0	0/0:3,0:2:2.97:0,3,20	0/0:4,0:1:3.01:0,3,38	0/0:5,2:6:9.97:0,10,88	0/0:4,0:3:0:0,0,0	0/0:4,1:5:0.94:0,1,2	0/0:5,2:6:0.10:0,0,1	0/1:2,1:3:0:0,0,0	./.	0/1:3,0:3:0.01:0,0,0	0/1:10,1:9:35.41:35,0,44	0/0:1,3:4:2.84:0,3,14	0/0:2,0:2:0.47:0,0,1
chr10	46636077	.	C	CAG	3024.63	PASS	AB=0.808;AC=21;AF=0.404;AN=52;BaseQRankSum=-0.385;DP=671;FS=1.809;HRun=0;HaplotypeScore=158.1107;InbreedingCoeff=0.8979;MQ=46.39;MQ0=11;MQRankSum=-6.509;QD=11.91;ReadPosRankSum=-1.207;VQSLOD=3.5372;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:41:87.18:0,87,1031	0/0:15,0:15:36.11:0,36,431	./.	./.	0/1:16,5:21:0:0,0,0	0/0:12,0:11:15.05:0,15,182	0/0:28,0:29:29.71:0,30,313	1/1:31,1:28:44.03:477,44,0	0/0:12,0:12:17.98:0,18,197	1/1:26,11:37:43.40:664,43,0	1/1:11,4:15:2.33:47,2,0	0/0:25,0:26:34.78:0,35,431	0/0:19,0:19:41.96:0,42,486	1/1:20,11:31:10.98:125,11,0	0/0:33,0:33:43.56:0,44,488	1/1:11,8:18:11.82:187,12,0	1/1:12,5:16:21.19:326,21,0	1/1:18,12:29:7.09:659,7,0	0/0:21,0:19:47.42:0,47,495	0/0:19,0:19:14.84:0,15,182	0/0:31,0:30:18.03:0,18,203	0/0:26,0:25:27.07:0,27,323	0/0:10,0:10:15.03:0,15,167	0/0:50,0:50:68.26:0,68,1031	1/1:20,8:27:24.05:363,24,0	1/1:16,4:20:21.89:248,22,0	0/0:21,0:21:25.31:0,25,280	1/1:1,3:4:9.03:127,9,0
chr10	46636099	.	GAC	G	2651.93	PASS	AB=0.742;AC=13;AF=0.232;AN=56;BaseQRankSum=5.910;DP=659;FS=6.166;HRun=0;HaplotypeScore=157.0401;InbreedingCoeff=-0.2796;MQ=42.02;MQ0=17;MQRankSum=-6.194;QD=8.42;ReadPosRankSum=-1.053;VQSLOD=2.8930;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:96.27:0,96,1775	0/0:14,0:14:42.14:0,42,787	0/0:21,0:1:3.01:0,3,53	0/0:43,0:4:5.55:0,6,114	0/1:11,8:18:0.02:0,0,0	0/0:8,5:12:15.01:0,15,248	0/1:19,12:28:60.69:61,0,371	0/1:34,17:48:99:566,0,927	0/0:16,0:16:30.06:0,30,505	0/1:21,8:29:99:288,0,559	0/0:7,1:8:3.01:0,3,48	0/0:24,1:25:3.92:0,4,816	0/0:23,0:22:60.07:0,60,1005	0/1:17,12:29:43.07:247,0,43	0/0:35,0:35:60.20:0,60,1135	0/1:12,6:17:99:181,0,121	0/1:13,4:16:99:150,0,213	0/1:23,6:28:99:353,0,606	0/1:19,6:24:99:297,0,609	0/0:6,2:8:15.05:0,15,284	0/1:23,7:29:91.28:91,0,225	0/0:20,0:19:33.11:0,33,563	0/0:8,0:8:17.74:0,18,257	0/0:56,0:56:99:0,135,2532	0/0:10,3:12:20.10:0,20,254	0/1:6,7:13:99:298,0,130	0/1:7,12:19:99:194,0,146	0/1:3,2:5:71.83:72,0,97
chr10	46636119	.	GAC	G	323.01	PASS	AB=0.900;AC=8;AF=0.143;AN=56;BaseQRankSum=7.748;DP=704;FS=9.166;HRun=0;HaplotypeScore=153.0113;InbreedingCoeff=0.0154;MQ=44.37;MQ0=23;MQRankSum=-4.744;QD=1.87;ReadPosRankSum=-2.326;VQSLOD=1.5330;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:69.18:0,69,1149	0/0:13,0:13:36.12:0,36,653	0/0:51,0:9:11.62:0,12,322	0/0:73,0:19:32.10:0,32,612	0/0:15,2:15:9.01:0,9,164	0/0:13,0:12:14.98:0,15,207	0/0:23,3:24:15.02:0,15,263	0/1:40,8:47:99:217,0,1114	0/0:22,0:22:44.36:0,44,744	0/1:25,2:27:53.31:53,0,577	0/0:9,0:9:6.02:0,6,92	0/0:25,0:25:53.95:0,54,931	0/0:24,0:23:60.20:0,60,1073	0/0:25,2:27:25.78:0,26,529	0/0:38,0:38:63.20:0,63,1103	0/0:16,5:22:30.03:0,30,547	0/0:14,0:14:27.05:0,27,447	0/1:26,2:28:80.73:81,0,567	0/1:25,1:26:4.08:4,0,841	0/0:9,0:9:21.03:0,21,325	0/1:31,0:31:18.84:19,0,278	0/0:11,0:11:21.05:0,21,352	0/0:10,0:10:26.97:0,27,401	0/0:52,0:52:99:0,120,2152	1/1:8,0:7:2.96:19,3,0	0/0:17,0:18:50.78:0,51,763	0/0:20,1:21:1.58:0,2,590	0/1:3,2:5:57.06:57,0,97
chr10	46637666	.	CCTTTCTTT	C	4924	PASS	AB=1.000;AC=29;AF=0.558;AN=52;BaseQRankSum=-8.005;DP=565;FS=1.700;HRun=0;HaplotypeScore=214.2395;InbreedingCoeff=-0.5082;MQ=49.13;MQ0=11;MQRankSum=4.214;QD=9.43;ReadPosRankSum=-8.822;VQSLOD=1.4357;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:24:48.28:254,0,48	0/1:9,0:9:55.16:95,0,55	./.	./.	0/1:25,0:25:99:110,0,167	0/0:22,0:22:42.14:0,42,940	0/0:19,0:19:23.82:0,24,295	1/1:30,0:25:2.04:6,2,0	0/1:20,0:19:87.75:88,0,134	0/1:21,0:20:56.72:57,0,205	0/1:20,0:18:99:140,0,167	0/1:18,0:18:99:218,0,103	0/1:25,0:25:99:270,0,164	0/1:21,0:20:96.76:152,0,97	0/1:23,0:23:99:322,0,189	0/1:21,0:21:99:272,0,182	0/1:27,0:27:99:170,0,430	0/1:26,0:26:99:103,0,104	1/1:18,7:23:21.05:339,21,0	1/1:14,10:24:21.07:311,21,0	1/1:13,0:11:9.02:125,9,0	0/1:10,0:10:48.42:53,0,48	0/1:24,0:24:68.73:570,0,69	0/1:25,0:24:99:439,0,147	0/1:29,0:28:99:206,0,138	0/1:22,0:20:90.77:91,0,147	1/1:29,0:29:33.11:508,33,0	0/1:11,0:10:24.60:25,0,130
chr10	46637893	.	CT	C	2786.52	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=10.203;DP=588;FS=7.024;HRun=9;HaplotypeScore=63.4324;InbreedingCoeff=0.9911;MQ=80.56;MQ0=0;MQRankSum=-0.118;QD=22.12;ReadPosRankSum=3.378;VQSLOD=4.5687;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,26:27:72.04:659,72,0	0/0:7,0:7:21.06:0,21,242	0/0:30,0:24:23.36:0,23,382	0/0:24,1:21:10.86:0,11,246	0/0:40,0:40:99:0,105,1212	0/0:22,0:22:63.14:0,63,710	0/0:18,0:18:51.15:0,51,589	0/0:19,0:19:51.14:0,51,581	1/1:0,9:9:27.01:247,27,0	0/0:17,0:18:51.10:0,51,566	0/0:21,0:21:60.17:0,60,683	1/1:0,14:14:33.02:302,33,0	1/1:2,20:22:57.03:522,57,0	0/0:13,0:12:30.08:0,30,338	0/0:24,0:24:63.19:0,63,727	0/0:15,0:15:45.13:0,45,519	0/0:24,0:24:66.20:0,66,761	0/0:20,0:20:45.08:0,45,492	0/0:18,0:18:51.09:0,51,572	0/0:24,0:24:66.19:0,66,753	0/0:18,0:18:45.13:0,45,519	1/1:0,13:13:39.02:357,39,0	1/1:5,20:25:28.41:514,28,0	1/1:1,15:16:42.02:384,42,0	0/0:25,0:24:63.19:0,63,727	0/0:25,0:25:69.21:0,69,797	0/0:40,0:40:99:0,117,1335	0/0:15,0:15:45.13:0,45,519
chr10	46639182	.	G	GA	525.33	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-2.201;DP=592;FS=0.000;HRun=9;HaplotypeScore=66.4910;InbreedingCoeff=0.9976;MQ=87.21;MQ0=0;MQRankSum=-2.129;QD=22.84;ReadPosRankSum=-1.064;VQSLOD=3.9669;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,102,885	0/0:13,0:13:35.97:0,36,309	0/0:29,0:29:52.16:0,52,420	0/0:23,0:21:27.04:0,27,238	0/0:29,0:29:71.96:0,72,625	0/0:22,0:22:59:0,59,497	0/0:14,0:14:38.99:0,39,338	0/0:22,0:22:53.98:0,54,469	0/0:19,0:19:44.96:0,45,386	0/0:20,0:20:50.98:0,51,443	0/0:18,0:18:47.95:0,48,411	0/0:12,0:12:29.99:0,30,260	0/0:20,0:20:44.99:0,45,391	0/0:21,0:21:53.98:0,54,469	0/0:23,0:23:68.99:0,69,599	0/0:20,0:20:50.99:0,51,443	0/0:20,0:20:56.96:0,57,489	0/0:19,0:19:50.98:0,51,443	0/0:21,0:21:53.97:0,54,469	1/1:2,20:23:50.71:620,51,0	0/0:14,0:14:29.98:0,30,260	0/0:20,0:20:50.98:0,51,443	0/0:24,0:24:62.94:0,63,543	0/0:15,0:15:44.99:0,45,391	0/0:25,0:25:71.96:0,72,622	0/0:20,0:20:50.97:0,51,443	0/0:27,0:27:77.95:0,78,669	0/0:21,0:21:50.95:0,51,442
chr10	46640880	.	AGTGC	A	3778.03	PASS	AB=0.976;AC=32;AF=0.571;AN=56;BaseQRankSum=-9.689;DP=692;FS=2.592;HRun=0;HaplotypeScore=153.8823;InbreedingCoeff=-0.2624;MQ=63.92;MQ0=7;MQRankSum=-3.035;QD=5.89;ReadPosRankSum=3.510;VQSLOD=2.7964;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:32,0:31:0:0,0,0	0/0:10,0:10:6.88:0,7,55	0/0:23,0:15:29.42:0,29,242	0/0:18,0:9:11.08:0,11,113	0/1:14,0:14:20.70:75,0,21	1/1:8,0:8:14.97:123,15,0	0/1:8,25:33:10.69:134,0,11	1/1:19,0:18:29.96:347,30,0	1/1:27,0:27:17.67:210,18,0	0/1:21,0:20:20.81:136,0,21	0/1:6,0:6:15.98:16,0,37	1/1:32,0:32:11.90:121,12,0	1/1:38,0:38:17.58:215,18,0	0/1:34,0:34:99:178,0,265	0/1:15,0:15:99:125,0,104	0/1:33,0:33:99:155,0,182	0/1:36,0:36:99:289,0,129	0/1:27,0:27:99:280,0,127	0/1:23,0:23:8.67:319,0,9	0/1:15,0:15:62.84:70,0,63	0/1:97,0:97:99:465,0,436	0/1:13,0:13:0:0,0,0	1/1:13,0:13:3.48:37,3,0	1/1:35,0:35:0.34:1,0,0	0/1:17,0:17:54.89:55,0,184	0/1:24,0:24:20.21:297,0,20	0/1:19,0:19:49.03:82,0,49	0/1:10,0:10:48.90:49,0,75
chr10	46640884	.	CGTGCGTGTGTGTGTGT	C	4475.50	PASS	AB=0.945;AC=28;AF=0.500;AN=56;BaseQRankSum=-11.742;DP=728;FS=5.685;HRun=0;HaplotypeScore=254.8127;InbreedingCoeff=-0.2747;MQ=61.02;MQ0=7;MQRankSum=-2.170;QD=6.99;ReadPosRankSum=0.757;VQSLOD=3.2660;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:2,30:32:0:0,0,0	0/0:10,0:10:6.91:0,7,361	0/0:21,0:13:29.42:0,29,272	0/0:17,0:8:11.10:0,11,164	0/1:15,0:15:74.85:75,0,171	0/1:9,0:9:99:102,0,282	0/0:32,0:33:17.84:0,18,522	0/1:21,0:20:99:218,0,470	1/1:3,21:26:17.82:813,18,0	0/1:23,0:22:21.47:21,0,1597	0/0:7,0:7:9.50:0,10,427	1/1:4,28:34:8.98:398,9,0	1/1:2,32:37:16.10:776,16,0	0/1:39,0:39:99:151,0,2360	0/1:16,0:16:26.80:27,0,1409	0/1:31,0:31:99:142,0,1828	0/1:34,0:34:99:288,0,1493	0/1:30,0:30:99:211,0,2235	0/1:22,0:22:99:266,0,792	0/1:18,0:19:50.80:51,0,812	0/1:112,0:112:99:375,0,5207	0/1:0,14:14:0:0,0,0	1/1:1,13:14:3.48:141,3,0	1/1:3,32:37:2.61:99,3,0	0/1:19,0:19:23.74:24,0,2004	0/1:25,0:25:99:190,0,1314	0/1:20,0:20:61.01:61,0,692	0/1:11,0:11:48.87:49,0,512
chr10	46640886	.	TGC	T	4768.85	PASS	AB=0.992;AC=42;AF=0.750;AN=56;BaseQRankSum=-2.543;DP=743;FS=3.481;HRun=0;HaplotypeScore=142.5529;InbreedingCoeff=0.3554;MQ=59.35;MQ0=7;MQRankSum=-1.327;QD=7.17;ReadPosRankSum=0.360;VQSLOD=4.1785;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:0:0,0,0	0/0:10,0:10:2.33:0,2,8	0/0:20,0:12:29.42:0,29,242	0/0:16,0:7:11.08:0,11,113	1/1:17,0:17:5.47:99,5,0	1/1:9,0:9:7.45:149,7,0	0/1:34,0:34:8.05:127,0,8	1/1:25,0:24:34.82:364,35,0	1/1:26,0:26:17.63:130,18,0	1/1:24,0:23:46.89:327,47,0	1/1:7,0:7:3.98:27,4,0	1/1:34,0:34:11.81:79,12,0	1/1:36,0:36:17.33:131,17,0	0/1:40,0:40:8.44:225,0,8	1/1:19,1:20:10.93:189,11,0	1/1:30,1:31:25.88:247,26,0	1/1:33,0:33:45.96:361,46,0	1/1:31,0:31:42.12:424,42,0	1/1:22,0:22:51.71:394,52,0	0/1:19,1:20:15.14:105,0,15	1/1:114,2:116:5.74:681,6,0	0/1:14,0:14:0:0,0,0	1/1:14,0:14:2.98:22,3,0	0/1:36,0:36:0:0,0,0	1/1:19,0:19:5.33:116,5,0	1/1:26,0:26:51.34:405,51,0	1/1:21,0:21:16.29:112,16,0	0/1:10,0:10:8.60:53,0,9
chr10	46640888	.	C	CGT	2722.40	PASS	AB=0.980;AC=30;AF=0.577;AN=52;BaseQRankSum=-6.930;DP=744;FS=2.997;HRun=0;HaplotypeScore=156.8041;InbreedingCoeff=0.1201;MQ=58.41;MQ0=7;MQRankSum=2.459;QD=4.78;ReadPosRankSum=-1.960;VQSLOD=3.0861;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:32,0:32:0:0,0,0	0/1:10,0:10:14.68:27,0,15	./.	./.	0/1:16,0:16:5.78:16,0,6	0/1:10,0:10:7.53:34,0,8	0/0:36,0:36:13.50:0,14,73	1/1:26,0:25:14.28:72,14,0	0/0:25,0:25:14.07:0,14,65	1/1:24,0:23:24.73:212,25,0	1/1:7,0:7:6.02:65,6,0	0/0:30,0:30:7.10:0,7,27	0/0:36,0:36:16.35:0,16,83	0/1:38,0:38:68.31:210,0,68	0/1:20,0:20:17.37:154,0,17	1/1:33,0:33:4.52:288,5,0	1/1:31,0:31:27.08:328,27,0	0/1:33,0:33:27.72:207,0,28	1/1:22,0:22:9.03:113,9,0	0/1:20,0:20:9.04:58,0,9	0/1:119,0:119:99:449,0,125	0/1:15,0:15:0:0,0,0	0/0:14,0:14:3.31:0,3,14	0/1:34,0:34:0:0,0,0	1/1:20,0:20:1.07:278,1,0	1/1:25,0:25:18.39:195,18,0	1/1:21,0:21:12.02:142,12,0	0/1:9,4:13:29.51:30,0,34
chr10	46640892	.	T	TGC	509.20	PASS	AB=0.940;AC=11;AF=0.204;AN=54;BaseQRankSum=6.943;DP=739;FS=0.000;HRun=0;HaplotypeScore=157.6748;InbreedingCoeff=0.0600;MQ=55.91;MQ0=8;MQRankSum=3.529;QD=2.08;ReadPosRankSum=5.532;VQSLOD=2.2840;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:32,0:32:0:0,0,0	0/1:3,7:10:20.86:49,0,21	0/0:16,0:8:17.21:0,17,217	0/0:15,0:6:11.07:0,11,124	0/0:14,0:14:9.85:0,10,81	0/0:10,0:9:5.01:0,5,132	0/0:39,0:39:26.74:0,27,251	0/0:26,0:25:67.90:0,68,492	0/0:25,0:25:20.14:0,20,110	0/0:25,0:24:37.87:0,38,293	0/1:6,0:7:7.85:8,0,17	0/0:30,0:30:9.09:0,9,38	0/0:35,0:35:16.46:0,16,86	0/1:38,0:38:8.44:8,0,432	1/1:18,4:22:18.47:428,18,0	0/1:31,0:31:31.21:31,0,211	0/1:28,0:28:56.58:57,0,191	0/0:29,0:29:24.86:0,25,461	0/0:22,0:22:28.71:0,29,369	0/0:20,0:20:6.19:0,6,119	0/0:122,0:122:14.24:0,14,950	./.	0/0:14,0:14:3.31:0,3,15	0/1:34,0:34:0:1,0,0	0/1:20,0:20:46.93:47,0,137	0/0:26,0:26:11.25:0,11,336	0/1:23,0:23:14.94:15,0,103	0/0:11,0:11:1.30:0,1,117
chr10	46640910	.	T	TGC	5265.35	PASS	AB=0.714;AC=24;AF=0.429;AN=56;BaseQRankSum=-1.906;DP=756;FS=5.320;HRun=0;HaplotypeScore=134.7342;InbreedingCoeff=0.3562;MQ=54.58;MQ0=11;MQRankSum=4.790;QD=11.91;ReadPosRankSum=4.647;VQSLOD=4.3893;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:23.74:0,24,180	0/1:8,0:8:5.82:6,0,54	0/0:15,0:5:8.96:0,9,73	0/0:14,0:6:14.68:0,15,100	0/1:2,9:12:0.12:0,0,1	0/0:9,0:8:3.01:0,3,120	0/0:37,0:36:41.96:0,42,391	0/1:32,0:31:63.55:203,0,64	0/0:29,0:29:26.90:0,27,211	1/1:5,20:24:9.22:497,9,0	1/1:1,7:8:9.01:139,9,0	0/0:36,0:36:26.90:0,27,210	0/0:37,0:37:29.65:0,30,226	0/1:12,22:34:32.14:374,0,32	0/0:22,0:22:7.12:0,7,251	0/1:4,23:27:9.12:483,0,9	0/1:3,20:23:7.80:480,0,8	1/1:27,4:31:3.81:529,4,0	1/1:4,14:18:20.94:299,21,0	1/1:5,14:19:6.18:89,6,0	1/1:28,89:116:14.70:848,15,0	0/0:19,0:19:8.99:0,9,75	0/0:18,0:18:12.45:0,12,98	0/0:38,0:38:11.79:0,12,89	1/1:11,8:19:0.63:527,1,0	1/1:4,21:25:6.30:406,6,0	0/1:3,19:23:3.28:208,0,3	0/1:19,1:20:13.87:177,0,14
chr10	46641856	.	AACACAC	A	3821.67	PASS	AB=0.975;AC=23;AF=0.426;AN=54;BaseQRankSum=-4.433;DP=585;FS=0.000;HRun=0;HaplotypeScore=166.2058;InbreedingCoeff=0.1151;MQ=68.40;MQ0=9;MQRankSum=1.694;QD=10.89;ReadPosRankSum=2.756;VQSLOD=2.7761;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:30:63.82:0,64,658	0/1:12,0:13:99:134,0,124	0/0:25,0:18:48.08:0,48,1203	0/0:31,0:18:26.34:0,26,611	0/1:18,0:18:79.74:80,0,162	1/1:22,0:22:50.21:396,50,0	0/1:18,0:18:99:156,0,125	1/1:4,0:32:53.72:602,54,0	0/0:14,0:14:35.87:0,36,441	0/1:20,0:20:99:154,0,136	0/1:18,0:18:99:143,0,124	0/0:13,0:13:33.02:0,33,431	0/0:15,0:15:30.54:0,31,541	0/1:24,0:24:99:112,0,442	0/1:20,0:22:99:126,0,347	0/1:19,0:19:99:109,0,147	0/1:31,0:32:70.36:70,0,500	0/1:21,0:21:99:152,0,278	1/1:8,14:21:42.14:829,42,0	./.	1/1:4,21:25:0.47:1,0,0	0/0:27,0:25:57.49:0,57,718	0/0:14,0:14:15.01:0,15,226	0/0:30,0:30:29.77:0,30,318	0/0:4,0:18:8.97:0,9,105	0/1:19,0:18:99:166,0,354	1/1:11,2:12:22.30:380,22,0	1/1:11,0:11:11.02:210,11,0
chr10	46641863	.	A	ACT	1530.87	PASS	AB=0.911;AC=22;AF=0.393;AN=56;BaseQRankSum=1.739;DP=641;FS=20.159;HRun=0;HaplotypeScore=162.1084;InbreedingCoeff=-0.0868;MQ=62.71;MQ0=13;MQRankSum=-1.258;QD=3.75;ReadPosRankSum=-4.709;VQSLOD=-0.0617;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:34:42.35:0,42,579	0/0:16,0:16:9.09:0,9,83	0/0:27,0:18:38.48:0,38,600	0/0:29,0:14:22.65:0,23,296	0/1:14,11:24:46.66:47,0,65	0/1:22,0:22:8.51:13,0,9	1/1:19,0:19:5.07:102,5,0	0/1:34,0:33:31.81:60,0,32	0/0:15,0:15:23.76:0,24,242	0/1:20,2:21:1.28:193,0,1	0/1:23,0:23:14.26:46,0,14	0/0:14,0:14:4.35:0,4,230	0/1:17,0:17:25.42:25,0,178	0/1:26,4:30:43.15:321,0,43	0/0:25,0:25:22.10:0,22,234	0/1:14,7:21:25.82:26,0,70	0/1:14,21:35:11.62:352,0,12	0/1:19,3:21:40.99:123,0,41	0/1:25,0:23:47.46:83,0,47	1/1:15,0:15:3:25,3,0	1/1:27,0:26:2.98:24,3,0	0/0:26,0:24:6.23:0,6,454	0/0:14,0:14:15.02:0,15,178	0/0:31,0:31:26.80:0,27,254	0/1:24,0:24:3.56:72,0,4	0/1:25,0:23:44.48:96,0,44	1/1:11,0:10:8.42:64,8,0	0/1:11,0:11:17.71:24,0,18
chr10	46641865	.	A	ACTCTCT	4126.92	PASS	AB=0.974;AC=34;AF=0.607;AN=56;BaseQRankSum=-4.617;DP=657;FS=13.989;HRun=0;HaplotypeScore=194.1300;InbreedingCoeff=-0.1978;MQ=62.15;MQ0=14;MQRankSum=-3.119;QD=7.20;ReadPosRankSum=-5.006;VQSLOD=-0.3925;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:37,0:35:25.58:280,26,0	0/1:16,0:16:7.65:8,0,154	0/0:28,0:18:49.88:0,50,756	0/0:30,0:14:24.39:0,24,372	0/1:23,0:22:85.09:105,0,85	0/1:24,0:24:9.61:33,0,10	1/1:18,0:18:8.98:262,9,0	0/1:35,0:34:26.93:99,0,27	1/1:13,1:16:11.29:195,11,0	1/1:24,0:23:10.71:377,11,0	0/1:23,0:23:22:128,0,22	1/1:10,0:11:14.34:204,14,0	0/1:6,12:22:44.33:441,0,44	0/1:30,0:30:99:224,0,109	0/0:26,0:26:53.07:0,53,531	0/1:20,0:20:6.66:44,0,7	0/1:34,0:34:9.96:214,0,10	0/1:22,0:21:99:121,0,108	0/1:25,0:23:34.24:181,0,34	1/1:18,0:17:3.01:72,3,0	1/1:28,0:27:3.01:48,3,0	1/1:28,0:26:9.47:329,9,0	0/1:14,0:14:0.36:20,0,0	1/1:15,0:32:2.24:48,2,0	0/1:25,0:24:22.72:143,0,23	0/1:26,0:24:39.72:405,0,40	0/1:11,0:10:2.97:74,0,3	0/1:11,0:11:44.10:72,0,44
chr10	46641867	.	A	ACTCTCTCT	7715.71	PASS	AB=0.969;AC=42;AF=0.778;AN=54;BaseQRankSum=-4.137;DP=762;FS=7.855;HRun=0;HaplotypeScore=257.6898;InbreedingCoeff=0.0218;MQ=57.03;MQ0=15;MQRankSum=-1.494;QD=10.88;ReadPosRankSum=-3.828;VQSLOD=1.9719;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:39,0:37:11.70:184,12,0	0/1:16,0:16:31.50:31,0,115	./.	0/1:35,0:14:0:0,0,0	0/1:24,0:23:99:122,0,111	1/1:30,0:30:8.94:198,9,0	1/1:24,0:22:15.04:300,15,0	1/1:37,0:36:11.97:128,12,0	1/1:22,0:22:12.51:338,13,0	1/1:24,0:23:36:539,36,0	0/1:24,0:24:2.14:184,0,2	1/1:16,0:16:12.03:225,12,0	1/1:29,0:29:36.05:902,36,0	0/1:28,0:28:99:298,0,100	0/0:25,0:25:13.20:0,13,413	1/1:22,0:22:14.51:79,15,0	0/1:36,0:36:44.45:324,0,44	0/1:22,0:21:87.29:164,0,87	1/1:39,0:37:47.61:1231,48,0	1/1:28,0:27:6.02:129,6,0	1/1:34,0:33:5.75:84,6,0	1/1:31,0:29:21.04:398,21,0	0/1:12,7:22:0.34:0,0,0	1/1:29,0:29:2.68:45,3,0	0/1:28,0:27:13.83:294,0,14	1/1:31,0:29:54.01:1076,54,0	1/1:25,0:20:15.09:340,15,0	0/1:14,0:14:28.91:104,0,29
chr10	46642975	.	AT	A	4306.14	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=3.782;DP=474;FS=33.346;HRun=8;HaplotypeScore=63.2315;InbreedingCoeff=0.9891;MQ=68.01;MQ0=3;MQRankSum=-4.599;QD=22.78;ReadPosRankSum=0.595;VQSLOD=2.9802;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:72.21:0,72,858	1/1:1,9:10:21.03:202,21,0	0/0:25,1:11:17.84:0,18,191	0/0:24,0:14:22.29:0,22,216	1/1:7,9:16:33:318,33,0	0/0:20,0:20:51.16:0,51,616	0/0:10,0:10:27.07:0,27,316	1/1:4,16:20:45.06:434,45,0	0/0:12,0:12:27.08:0,27,326	1/1:4,13:17:42.06:406,42,0	1/1:4,16:20:48.07:463,48,0	0/0:26,0:26:60.17:0,60,714	0/0:18,0:18:33.10:0,33,399	1/1:3,4:7:15.02:144,15,0	1/1:5,8:13:30.03:283,30,0	1/1:4,5:9:21.01:195,21,0	1/1:9,17:26:63.07:600,63,0	1/1:5,8:13:33.05:318,33,0	0/0:16,0:16:45.14:0,45,542	0/0:23,0:23:57.17:0,57,687	0/0:4,0:4:12.04:0,12,145	0/0:14,0:14:30.08:0,30,350	0/0:16,0:16:33.10:0,33,399	0/0:13,0:13:33.10:0,33,399	1/1:4,7:11:30.05:289,30,0	1/1:3,17:20:51.08:492,51,0	0/0:33,0:32:86.89:0,87,932	1/1:2,5:7:17.95:162,18,0
chr10	46642994	.	CT	C	2197.01	PASS	AB=0.716;AC=40;AF=0.714;AN=56;BaseQRankSum=5.117;DP=481;FS=15.039;HRun=15;HaplotypeScore=62.4853;InbreedingCoeff=0.4014;MQ=55.02;MQ0=18;MQRankSum=0.679;QD=6.41;ReadPosRankSum=3.755;VQSLOD=1.0264;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,21:30:50.03:317,50,0	1/1:4,3:7:8.83:58,9,0	0/0:36,0:9:0.66:0,1,11	0/0:26,0:9:2.88:0,3,15	1/1:10,8:19:5.84:88,6,0	1/1:5,12:17:25.66:160,26,0	1/1:5,6:12:0.79:99,1,0	0/1:14,1:14:38.01:42,0,38	1/1:5,7:14:14:120,14,0	1/1:13,8:20:20.31:124,20,0	1/1:9,11:20:24.61:146,25,0	1/1:13,11:24:2.09:133,2,0	0/1:8,8:17:15.68:33,0,16	1/1:4,2:6:11.70:72,12,0	1/1:7,4:11:19.65:116,20,0	1/1:4,7:12:13.80:83,14,0	1/1:16,8:25:22.57:138,23,0	1/1:6,2:10:15.84:88,16,0	0/0:18,0:14:20.08:0,20,186	0/0:24,1:27:15.67:0,16,265	0/0:5,0:5:14.84:0,15,106	0/1:6,8:14:32.57:59,0,33	1/1:6,9:17:24.63:146,25,0	1/1:2,9:12:22.71:140,23,0	0/1:6,8:14:34.98:59,0,35	1/1:11,4:15:0.96:63,1,0	0/0:22,2:22:3.46:0,3,278	1/1:1,4:6:13.82:83,14,0
chr10	46643060	.	T	TTA	1266.07	PASS	AB=0.830;AC=13;AF=0.232;AN=56;BaseQRankSum=10.977;DP=497;FS=59.544;HRun=0;HaplotypeScore=104.5911;InbreedingCoeff=-0.2943;MQ=50.90;MQ0=8;MQRankSum=-9.778;QD=5.43;ReadPosRankSum=-0.660;VQSLOD=0.3701;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:63.22:0,63,1028	0/1:7,2:9:53.87:54,0,212	0/0:14,0:3:3.01:0,3,49	0/0:19,0:5:12.04:0,12,183	0/1:21,4:25:51.86:52,0,722	0/0:13,0:13:30.10:0,30,486	0/0:14,0:14:42.14:0,42,685	0/1:16,0:15:5.59:6,0,454	0/0:16,0:16:45.15:0,45,729	0/1:22,8:30:99:401,0,850	0/1:16,7:23:99:147,0,578	0/0:22,0:22:60.20:0,60,970	0/0:11,0:11:27.09:0,27,434	0/1:8,2:11:87.04:87,0,220	0/1:13,4:17:97.15:97,0,584	0/1:13,4:17:99:108,0,437	0/1:16,3:18:0.96:1,0,501	0/1:4,1:5:45.79:46,0,181	0/0:16,0:13:36.12:0,36,576	0/0:29,0:29:81.26:0,81,1293	0/0:13,0:12:36.12:0,36,585	0/0:19,0:19:51.17:0,51,830	0/0:18,0:17:42.08:0,42,661	0/0:12,0:12:33.11:0,33,538	0/1:20,8:28:99:190,0,695	0/1:9,3:11:99:149,0,358	0/0:26,0:25:78.27:0,78,1266	0/1:18,3:21:76.37:76,0,771
chr10	46643077	.	C	CCT	1401.54	PASS	AB=0.817;AC=14;AF=0.250;AN=56;BaseQRankSum=12.194;DP=536;FS=63.445;HRun=0;HaplotypeScore=121.0999;InbreedingCoeff=-0.3122;MQ=56.29;MQ0=6;MQRankSum=-10.070;QD=5.25;ReadPosRankSum=-0.291;VQSLOD=0.3055;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:66.22:0,66,1010	0/1:7,4:11:67.81:68,0,205	0/1:10,0:7:5.71:6,0,211	0/0:16,0:10:23.10:0,23,309	0/1:21,8:29:85.62:86,0,730	0/0:16,0:16:39.13:0,39,596	0/0:14,0:14:42.14:0,42,642	0/1:18,2:20:99:141,0,389	0/0:16,0:16:45.15:0,45,687	0/1:24,8:32:99:333,0,803	0/1:18,7:25:99:109,0,573	0/0:28,0:28:81.28:0,81,1239	0/0:13,0:13:36.12:0,36,548	0/1:6,5:11:99:118,0,199	0/1:12,4:16:60.30:60,0,502	0/1:12,4:16:73.36:73,0,415	0/1:13,5:17:0.54:1,0,383	0/1:4,1:5:25.62:26,0,78	0/0:19,0:16:42.14:0,42,643	0/0:30,0:30:84.29:0,84,1282	0/0:14,0:13:39.13:0,39,597	0/0:23,0:23:63.20:0,63,926	0/0:17,0:16:36.12:0,36,551	0/0:12,0:12:36.12:0,36,551	0/1:25,9:34:99:274,0,634	0/1:14,3:16:99:169,0,322	0/0:26,0:25:78.22:0,78,1168	0/1:20,3:23:90.30:90,0,717
chr10	46646433	.	GTT	G	786.86	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-1.016;DP=745;FS=0.626;HRun=14;HaplotypeScore=155.9267;InbreedingCoeff=0.9079;MQ=61.56;MQ0=14;MQRankSum=3.911;QD=15.74;ReadPosRankSum=4.107;VQSLOD=1.3165;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:24:50.99:0,51,293	1/1:0,13:13:29.72:275,30,0	0/0:57,0:22:15.12:0,15,125	0/0:50,0:17:15.39:0,15,105	0/0:29,0:29:24.33:0,24,175	0/0:22,0:22:27.62:0,28,175	0/0:8,0:24:20.49:0,20,143	0/0:42,0:41:69.86:0,70,415	0/0:26,0:25:53.81:0,54,381	0/0:20,0:20:53.73:0,54,328	0/0:19,0:18:18.46:0,18,147	0/0:10,0:25:5.73:0,6,33	0/0:9,0:28:20.44:0,20,164	0/0:26,0:26:20.47:0,20,150	1/1:8,29:37:68.70:634,69,0	0/0:23,0:24:27.19:0,27,235	0/0:11,0:11:17.63:0,18,123	0/0:26,0:26:26.90:0,27,227	0/0:24,0:21:47.77:0,48,373	0/0:25,0:24:56.98:0,57,503	0/0:46,0:44:99:0,117,991	0/0:21,0:20:43.38:0,43,254	0/0:16,0:16:17.17:0,17,117	0/0:22,0:22:38.29:0,38,265	0/0:21,0:22:40.64:0,41,300	0/0:17,0:17:29.08:0,29,207	0/0:29,0:29:68.84:0,69,579	0/0:11,0:11:18.51:0,19,147
chr10	46646434	.	T	TTTTTG	8824.57	PASS	AB=1.000;AC=44;AF=0.786;AN=56;BaseQRankSum=1.067;DP=742;FS=5.915;HRun=0;HaplotypeScore=185.0248;InbreedingCoeff=0.5300;MQ=61.52;MQ0=15;MQRankSum=-5.777;QD=15.40;ReadPosRankSum=-5.128;VQSLOD=3.0950;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:24:53.65:621,54,0	0/0:13,0:13:14:0,14,118	0/0:58,0:22:18.71:0,19,321	0/0:52,0:17:18.08:0,18,151	1/1:12,17:32:37.55:636,38,0	1/1:22,0:21:29.35:415,29,0	1/1:22,0:21:1.83:302,2,0	1/1:42,0:41:5.12:788,5,0	1/1:28,0:27:56.79:679,57,0	1/1:20,0:20:57.91:891,58,0	1/1:19,0:17:23.48:286,23,0	1/1:24,0:23:11.90:119,12,0	1/1:28,0:28:26.29:318,26,0	1/1:26,0:26:20.84:219,21,0	0/1:37,0:37:18.33:18,0,261	1/1:24,0:24:36.69:375,37,0	1/1:11,0:11:20.47:252,20,0	1/1:27,0:26:14.66:208,15,0	0/1:24,0:21:8.09:8,0,293	0/1:25,0:24:6.35:6,0,429	0/0:46,0:44:48.22:0,48,877	1/1:21,0:20:49.37:581,49,0	1/1:16,0:16:20.36:207,20,0	1/1:22,0:22:44.85:565,45,0	1/1:21,0:21:26.74:500,27,0	1/1:17,0:17:47.38:610,47,0	0/1:28,0:28:31.16:31,0,385	1/1:11,0:11:4.16:188,4,0
chr10	46646437	.	T	TTG	4343.85	PASS	AB=0.984;AC=32;AF=0.571;AN=56;BaseQRankSum=3.399;DP=734;FS=23.365;HRun=0;HaplotypeScore=145.6083;InbreedingCoeff=-0.3554;MQ=60.68;MQ0=16;MQRankSum=1.465;QD=7.52;ReadPosRankSum=2.758;VQSLOD=2.7281;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:24:25.01:217,0,25	0/1:14,0:14:18.11:23,0,18	0/0:55,0:19:18.79:0,19,286	0/0:51,0:17:19.16:0,19,178	0/1:29,0:27:10.57:247,0,11	0/1:21,0:20:32.82:127,0,33	0/1:22,0:21:18.98:126,0,19	0/1:39,0:37:43.52:449,0,44	0/1:29,0:28:99:220,0,148	1/1:21,0:21:31:508,31,0	1/1:10,9:17:2.30:149,2,0	0/1:22,0:21:8.41:46,0,8	0/1:24,0:24:34.40:78,0,34	1/1:5,18:26:0.42:157,0,0	1/1:39,0:39:5.67:124,6,0	0/1:25,0:25:29.80:143,0,30	1/1:10,0:10:20.68:175,21,0	0/1:26,0:25:3.23:161,0,3	0/1:22,0:19:20.16:20,0,76	0/1:24,0:23:15.29:15,0,130	0/0:50,0:48:35.26:0,35,287	0/1:21,0:20:39.47:268,0,39	0/1:16,0:16:22.96:81,0,23	0/1:21,0:21:45.96:188,0,46	1/1:14,7:21:27.78:306,28,0	1/1:19,1:20:4.69:344,5,0	0/1:30,0:30:30.33:30,0,141	0/1:7,5:12:17.93:139,0,18
chr10	46646438	.	T	TG	3151.50	PASS	AB=0.889;AC=32;AF=0.571;AN=56;BaseQRankSum=2.626;DP=728;FS=72.325;HRun=0;HaplotypeScore=136.8838;InbreedingCoeff=-0.4978;MQ=60.04;MQ0=16;MQRankSum=1.772;QD=5.06;ReadPosRankSum=2.558;VQSLOD=0.2587;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:21,4:24:91.18:212,0,91	1/1:15,0:15:13.62:141,14,0	0/0:54,0:18:18.81:0,19,295	0/0:50,0:17:21.21:0,21,200	0/1:29,0:27:41.74:78,0,42	0/1:7,13:20:67.30:135,0,67	0/1:22,0:21:38.91:39,0,43	0/1:36,2:36:99:285,0,115	0/1:30,0:29:99:172,0,193	1/1:21,1:22:12.06:333,12,0	1/1:15,3:16:1.66:135,2,0	0/1:21,0:20:13.59:38,0,14	0/1:22,0:23:41.84:42,0,56	0/1:25,1:26:5.54:62,0,6	1/1:36,4:40:37.97:336,38,0	0/1:9,16:25:62.14:180,0,62	1/1:9,1:10:14.38:110,14,0	1/1:8,17:24:0.42:81,0,0	0/1:22,0:19:13.18:46,0,13	0/1:22,0:21:39.30:39,0,47	0/1:48,0:46:13.39:13,0,84	0/1:19,2:20:95.96:187,0,96	0/1:6,10:17:35.70:38,0,36	0/1:16,4:20:99:123,0,102	0/1:19,2:21:56.47:85,0,56	0/1:9,10:20:26.09:290,0,26	0/1:30,0:30:47.81:51,0,48	0/1:11,1:12:61.58:62,0,65
chr10	46650019	.	GGTGT	G	642.83	PASS	AB=1.000;AC=21;AF=0.457;AN=46;BaseQRankSum=1.644;DP=423;FS=10.492;HRun=0;HaplotypeScore=71.0427;InbreedingCoeff=0.5979;MQ=59.81;MQ0=16;MQRankSum=-1.887;QD=3.97;ReadPosRankSum=0.486;VQSLOD=0.4724;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:12.04:0,12,212	0/0:6,0:5:3.01:0,3,61	./.	./.	1/1:10,0:9:6.01:71,6,0	1/1:10,0:12:1.25:3,1,0	./.	0/1:23,0:21:0.01:0,0,0	0/0:10,0:11:11.78:0,12,168	1/1:11,4:15:6:70,6,0	./.	0/0:9,0:9:6.02:0,6,135	0/0:7,0:6:3.01:0,3,41	1/1:6,3:9:8.99:113,9,0	0/0:14,0:14:18.03:0,18,322	1/1:7,3:11:6.02:93,6,0	1/1:23,6:29:8.73:139,9,0	1/1:16,4:20:10.28:142,10,0	./.	0/0:12,0:14:5.74:0,6,36	0/0:21,0:20:3.01:0,3,70	0/0:15,0:16:17.80:0,18,331	0/0:13,0:12:3.01:0,3,71	0/0:31,0:32:38.57:0,39,624	1/1:10,7:18:3.01:47,3,0	1/1:6,6:12:5.92:72,6,0	0/0:14,1:17:5.49:0,5,24	1/1:0,2:2:3.01:46,3,0
chr10	46650717	.	GCT	G	3886.07	PASS	AB=0.881;AC=16;AF=0.286;AN=56;BaseQRankSum=-9.153;DP=840;FS=1.944;HRun=0;HaplotypeScore=194.9871;InbreedingCoeff=0.5343;MQ=62.10;MQ0=13;MQRankSum=6.230;QD=10.98;ReadPosRankSum=7.486;VQSLOD=3.0206;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,22:38:7.44:588,7,0	0/0:7,0:7:16.27:0,16,191	0/0:40,0:19:14.54:0,15,133	0/1:57,1:36:29.25:29,0,97	0/0:22,0:25:12.35:0,12,78	0/0:13,0:13:7.26:0,7,51	0/0:37,0:37:18.30:0,18,151	0/0:42,0:42:47.63:0,48,386	1/1:11,20:33:16.13:524,16,0	0/0:31,0:35:61.86:0,62,693	0/0:4,0:24:5.90:0,6,42	0/1:13,26:41:8.19:492,0,8	1/1:8,23:34:59.68:646,60,0	0/0:9,0:28:5.74:0,6,31	0/1:30,0:29:24.93:25,0,519	0/0:13,0:44:13.64:0,14,84	0/0:10,0:28:5.99:0,6,50	0/0:18,0:21:7.32:0,7,147	0/0:10,0:23:33.81:0,34,256	0/0:5,0:24:31.01:0,31,180	0/1:18,2:36:54.29:54,0,67	1/1:5,14:19:32.35:364,32,0	1/1:13,9:21:41.49:463,41,0	1/1:9,31:40:62.75:700,63,0	0/0:7,0:25:17.65:0,18,107	0/0:7,0:40:57.80:0,58,398	0/0:8,0:22:7.91:0,8,48	0/0:5,0:5:3.48:0,3,41
chr10	46650818	.	T	TTC	4631.22	PASS	AB=0.819;AC=16;AF=0.296;AN=54;BaseQRankSum=-6.381;DP=740;FS=0.000;HRun=0;HaplotypeScore=149.8019;InbreedingCoeff=-0.0019;MQ=58.13;MQ0=12;MQRankSum=1.337;QD=12.52;ReadPosRankSum=-0.957;VQSLOD=4.4267;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:67.83:0,68,700	0/0:12,0:12:3.01:0,3,34	0/0:23,0:13:6.01:0,6,63	0/0:25,0:17:19.50:0,20,180	0/1:13,9:23:55.21:230,0,55	0/0:9,0:9:9.03:0,9,102	0/0:27,0:28:24.76:0,25,243	0/1:24,0:23:13:203,0,13	0/0:27,0:31:50.25:0,50,466	0/1:20,21:41:1.79:844,0,2	0/1:16,4:19:3.98:360,0,4	0/0:32,0:36:71.34:0,71,694	0/0:29,0:31:53.82:0,54,572	0/1:23,7:30:99:431,0,133	0/0:31,0:31:24.05:0,24,262	0/1:26,13:38:13.30:834,0,13	0/1:20,4:24:99:285,0,99	0/1:18,11:32:37.97:312,0,38	0/1:13,0:13:7.98:8,0,14	1/1:20,0:21:13.10:41,13,0	./.	0/0:33,0:35:65.65:0,66,672	0/0:5,0:23:23.45:0,23,94	0/0:30,0:32:65.17:0,65,626	0/1:14,18:36:99:416,0,116	0/1:26,5:31:36.03:425,0,36	0/1:23,0:26:12.57:13,0,112	1/1:3,6:7:15.05:230,15,0
chr10	46650838	.	C	CA	221.99	PASS	AB=1.000;AC=6;AF=0.107;AN=56;BaseQRankSum=3.715;DP=730;FS=9.686;HRun=0;HaplotypeScore=151.2990;InbreedingCoeff=0.5187;MQ=54.92;MQ0=11;MQRankSum=-3.455;QD=4.11;ReadPosRankSum=-4.490;VQSLOD=1.9397;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:42:99:0,105,1341	0/0:9,0:9:13.85:0,14,172	0/0:14,0:7:21.07:0,21,289	0/0:26,0:18:44.75:0,45,614	0/0:26,0:26:63.02:0,63,746	0/0:10,0:10:11.14:0,11,203	0/0:26,0:25:27.99:0,28,463	0/0:29,0:28:81.19:0,81,1045	0/0:32,0:32:95.79:0,96,1188	0/0:39,0:39:99:0,114,1279	0/0:18,0:17:45.01:0,45,481	0/0:34,0:34:98.91:0,99,1240	0/0:29,0:29:78.09:0,78,1035	0/0:25,0:25:68.99:0,69,763	0/0:34,0:33:29.07:0,29,454	0/0:43,0:42:99:0,102,1023	0/0:27,0:27:66.07:0,66,799	0/0:28,0:28:65.27:0,65,704	0/1:9,0:8:99:100,0,121	1/1:15,4:19:15.06:152,15,0	1/1:4,0:4:3.01:45,3,0	0/0:45,0:45:99:0,123,1558	0/0:31,0:31:55.03:0,55,485	0/0:32,0:32:89.79:0,90,1104	0/0:35,0:35:69:0,69,753	0/0:28,0:28:75.12:0,75,882	0/1:22,0:22:48.59:49,0,116	0/0:12,0:10:26.90:0,27,271
chr10	46650850	.	T	TACACACACACAC	2678.47	PASS	AC=12;AF=0.222;AN=54;BaseQRankSum=5.842;DP=747;FS=0.638;HRun=0;HaplotypeScore=289.7776;InbreedingCoeff=0.8383;MQ=56.79;MQ0=6;MQRankSum=-8.060;QD=24.80;ReadPosRankSum=-2.813;VQSLOD=2.0114;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:43:81.35:0,81,2764	1/1:7,0:7:2.94:105,3,0	0/0:15,0:11:21.06:0,21,575	0/0:23,0:20:8.22:0,8,831	0/0:26,0:26:56.22:0,56,1773	./.	0/0:15,4:26:0.47:0,0,1	0/0:27,0:27:56.20:0,56,1567	0/0:31,0:31:77.61:0,78,2508	0/0:40,0:40:48.05:0,48,1978	0/0:18,0:17:33.07:0,33,928	0/0:37,0:38:96.07:0,96,2948	0/0:25,0:25:48.16:0,48,1679	0/0:27,0:28:53.62:0,54,1447	1/1:29,0:28:2.70:29,3,0	0/0:42,0:45:92.70:0,93,2673	0/0:29,0:30:44.67:0,45,1659	0/0:26,0:26:52.06:0,52,1611	1/1:13,0:12:27.02:870,27,0	1/1:21,0:21:17.98:609,18,0	1/1:9,0:9:3.01:82,3,0	0/0:39,0:41:81.13:0,81,2654	0/0:32,0:32:63.19:0,63,1931	0/0:32,0:33:65.10:0,65,2081	0/0:36,0:36:57.74:0,58,1858	0/0:26,0:28:52.06:0,52,1661	1/1:29,0:29:41.26:1146,41,0	0/0:11,0:10:27.06:0,27,840
chr10	46650865	.	A	ACACACACACACACACACACC	6141.45	PASS	AB=0.982;AC=11;AF=0.196;AN=56;BaseQRankSum=7.079;DP=749;FS=2.363;HRun=0;HaplotypeScore=389.4662;InbreedingCoeff=0.5270;MQ=64.66;MQ0=4;MQRankSum=-8.709;QD=42.95;ReadPosRankSum=-2.294;VQSLOD=2.5460;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,111,4258	1/1:3,0:10:9.02:458,9,0	0/0:21,0:18:6.45:0,6,914	0/0:27,0:24:10.30:0,10,1384	0/0:27,0:27:71.20:0,71,2871	0/1:13,0:13:40.86:129,0,41	0/0:24,0:24:20.89:0,21,164	0/0:29,0:29:80.21:0,80,2532	0/0:31,0:31:87.19:0,87,3979	0/0:39,0:39:86.58:0,87,3463	0/0:15,0:14:36.09:0,36,1346	0/0:38,0:38:99:0,108,4595	0/0:22,0:22:62.96:0,63,2580	0/0:27,0:27:62.61:0,63,2343	1/1:13,9:37:18.24:999,18,0	0/0:43,0:42:95.71:0,96,4075	0/0:31,0:31:65.28:0,65,2831	0/0:24,0:24:35.36:0,35,2490	0/1:17,0:17:43.98:1149,0,44	1/1:22,0:22:3.36:1297,3,0	0/1:14,0:14:62.18:72,0,62	0/0:35,0:35:87.27:0,87,4119	0/0:30,0:30:69.68:0,70,3023	0/0:26,0:26:78.22:0,78,3386	0/0:33,0:33:75.73:0,76,3126	0/0:26,0:26:61.02:0,61,2584	1/1:27,0:27:3.28:2038,3,0	0/0:13,0:12:33.05:0,33,1333
chr10	46651139	.	G	GTT	2555.80	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.572;DP=630;FS=7.045;HRun=0;HaplotypeScore=107.0208;InbreedingCoeff=0.9964;MQ=92.33;MQ0=0;MQRankSum=-3.258;QD=54.38;ReadPosRankSum=2.588;VQSLOD=3.9328;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,105,1701	1/1:0,15:16:45.15:912,45,0	0/0:27,0:27:72.24:0,72,1153	0/0:27,0:27:78.25:0,78,1190	0/0:17,0:17:42.13:0,42,658	0/0:18,0:18:51.17:0,51,830	0/0:14,0:14:42.12:0,42,652	0/0:27,0:27:78.25:0,78,1248	0/0:26,1:27:20.32:0,20,1201	0/0:23,0:23:66.18:0,66,1046	0/0:15,0:15:39.13:0,39,623	0/0:22,0:22:63.22:0,63,1025	0/0:20,0:20:60.19:0,60,941	0/0:29,0:29:84.24:0,84,1283	1/1:2,28:31:87.30:1765,87,0	0/0:23,0:23:69.22:0,69,1101	0/0:29,0:29:87.30:0,87,1410	0/0:20,0:20:60.20:0,60,978	0/0:18,0:18:54.18:0,54,867	0/0:15,0:15:42.10:0,42,601	0/0:42,0:42:99:0,123,1978	0/0:15,0:15:45.15:0,45,727	0/0:22,0:22:51.15:0,51,783	0/0:29,0:29:84.29:0,84,1358	0/0:17,0:17:45.15:0,45,734	0/0:21,0:21:57.18:0,57,885	0/0:20,0:20:60.20:0,60,975	0/0:10,0:10:24.08:0,24,391
chr10	46653375	.	C	CCA	8044.79	PASS	AB=0.590;AC=15;AF=0.268;AN=56;BaseQRankSum=-15.795;DP=805;FS=4.426;HRun=0;HaplotypeScore=95.2174;InbreedingCoeff=0.6923;MQ=65.84;MQ0=3;MQRankSum=1.176;QD=26.38;ReadPosRankSum=2.725;VQSLOD=5.9800;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:21,38:60:4.13:1516,4,0	0/0:12,0:12:36.11:0,36,429	0/0:42,0:30:47.99:0,48,504	0/0:36,0:24:26.86:0,27,259	0/0:26,0:26:57.17:0,57,679	1/1:9,16:25:12.41:681,12,0	1/1:11,33:44:18.78:1266,19,0	0/0:14,0:16:30.39:0,30,336	0/1:10,22:32:5.78:844,0,6	0/0:28,0:28:63.19:0,63,749	0/0:19,0:19:45.13:0,45,527	0/1:11,17:29:85.86:659,0,86	1/1:10,24:35:0.72:955,1,0	0/0:27,0:29:60:0,60,682	0/0:30,0:30:72.19:0,72,831	0/0:17,0:17:42.10:0,42,480	0/0:36,0:40:80.56:0,81,905	0/0:24,0:26:32.99:0,33,571	0/0:25,0:25:45.10:0,45,513	0/0:15,0:15:30.07:0,30,339	0/0:45,0:46:84.09:0,84,978	1/1:4,12:18:29.99:446,30,0	0/1:3,11:14:2.65:445,0,3	1/1:14,33:48:31.68:1234,32,0	0/0:23,0:23:51.11:0,51,586	0/0:30,0:32:69.01:0,69,772	0/0:33,0:35:78.06:0,78,897	0/0:3,0:3:9.03:0,9,107
chr10	46654236	.	TACACACAC	T	828.49	PASS	AC=10;AF=0.192;AN=52;BaseQRankSum=2.052;DP=585;FS=17.266;HRun=0;HaplotypeScore=142.5389;InbreedingCoeff=0.7587;MQ=61.09;MQ0=15;MQRankSum=-5.034;QD=8.37;ReadPosRankSum=0.586;VQSLOD=1.6622;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:24,15:40:9.03:207,9,0	0/0:4,0:8:9.03:0,9,257	./.	./.	0/0:9,0:16:21.03:0,21,511	0/0:17,0:22:9.03:0,9,216	0/0:17,0:24:9.50:0,10,278	0/0:18,0:18:28.34:0,28,834	1/1:8,4:11:8.17:218,8,0	0/0:10,0:15:25.90:0,26,727	0/0:13,0:13:5.77:0,6,162	1/1:9,4:14:3.01:56,3,0	1/1:8,7:14:15.05:358,15,0	0/0:19,0:30:21.07:0,21,710	0/0:13,0:24:33.11:0,33,1143	0/0:11,0:21:12.04:0,12,415	0/0:19,0:35:36.12:0,36,1121	0/0:9,0:18:21.54:0,22,672	0/0:13,0:16:23.20:0,23,199	0/0:8,0:13:18.05:0,18,252	0/0:34,0:38:30.05:0,30,434	1/1:11,6:16:6.02:134,6,0	0/0:8,3:11:0:0,0,1	0/0:20,10:31:0.47:0,0,1	0/0:18,0:18:20.33:0,20,561	0/0:14,0:25:43.38:0,43,1259	0/0:9,0:14:14.98:0,15,146	0/0:7,0:8:18.04:0,18,532
chr10	46654405	.	C	CTTT	1227.86	PASS	AB=0.931;AC=13;AF=0.232;AN=56;BaseQRankSum=12.713;DP=575;FS=3.108;HRun=4;HaplotypeScore=128.6730;InbreedingCoeff=0.0812;MQ=62.73;MQ0=3;MQRankSum=-8.080;QD=5.68;ReadPosRankSum=-1.230;VQSLOD=-0.4671;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:29:20.93:21,0,21	0/0:14,0:14:39.12:0,39,657	0/0:19,0:15:39.03:0,39,579	0/0:16,0:13:35.81:0,36,538	0/0:15,0:15:16.65:0,17,513	0/0:14,0:14:39.13:0,39,711	0/0:22,0:22:63.18:0,63,1067	0/0:33,0:33:52.16:0,52,1258	1/1:13,0:13:5.34:22,5,0	0/1:18,0:18:4.57:5,0,620	0/0:14,0:14:17.54:0,18,436	1/1:18,0:18:11.23:53,11,0	0/1:15,0:15:7.96:8,0,8	0/0:14,0:14:21.01:0,21,599	0/0:29,0:29:78.25:0,78,1349	0/0:18,0:18:24.77:0,25,611	0/0:32,0:31:41.82:0,42,1138	0/0:23,0:22:20.01:0,20,807	0/0:22,0:21:30.14:0,30,300	0/1:9,13:22:33.71:672,0,34	0/1:16,8:24:99:484,0,118	0/1:30,0:30:28.84:29,0,591	0/1:18,0:18:43.84:44,0,65	0/1:17,0:17:35.80:36,0,318	0/0:27,0:27:28.90:0,29,877	0/0:25,0:24:3.28:0,3,830	0/0:22,0:22:64.86:0,65,426	0/1:12,0:11:7.31:7,0,232
chr10	46654406	.	C	CTCCTTTCTTTCTTTCT	10078.76	PASS	AB=0.774;AC=27;AF=0.482;AN=56;BaseQRankSum=2.416;DP=663;FS=0.770;HRun=0;HaplotypeScore=234.5089;InbreedingCoeff=0.0342;MQ=61.15;MQ0=3;MQRankSum=-5.797;QD=19.88;ReadPosRankSum=-3.992;VQSLOD=2.9526;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:0,0:35:18.06:458,18,0	0/0:9,0:14:35.92:0,36,611	0/0:18,0:15:26.24:0,26,337	0/0:14,0:11:27.05:0,27,300	0/1:10,0:27:99:477,0,152	0/0:14,0:14:39.02:0,39,1111	0/0:22,0:22:63.08:0,63,1307	0/1:33,0:33:99:235,0,517	1/1:3,0:22:6.02:201,6,0	0/1:10,0:23:99:1085,0,161	0/1:11,0:19:99:237,0,188	1/1:0,0:22:12.04:561,12,0	1/1:0,0:19:6.02:265,6,0	0/1:12,0:22:99:371,0,231	0/0:13,0:29:78.06:0,78,1554	0/1:14,0:26:99:303,0,245	0/1:32,0:31:99:204,0,494	0/1:23,0:22:99:424,0,285	0/0:22,0:21:59.94:0,60,908	0/1:9,0:22:99:110,0,236	0/1:15,0:23:23.61:24,0,385	1/1:0,0:41:80.05:1076,80,0	1/1:0,15:26:21:993,21,0	1/1:17,0:17:41.95:913,42,0	0/1:18,0:36:99:390,0,335	0/1:25,0:24:99:969,0,309	0/0:22,0:22:36.81:0,37,1185	0/1:8,0:13:99:785,0,142
chr10	46654521	.	TG	T	3803.93	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-2.124;DP=674;FS=8.441;HRun=2;HaplotypeScore=127.4007;InbreedingCoeff=0.9999;MQ=65.68;MQ0=1;MQRankSum=-0.183;QD=37.29;ReadPosRankSum=3.262;VQSLOD=2.4595;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,129,1818	0/0:18,0:18:54.17:0,54,790	0/0:22,0:22:61.03:0,61,844	0/0:31,0:27:69.10:0,69,980	0/0:21,0:21:63.11:0,63,909	0/0:22,0:22:60.10:0,60,851	0/0:22,0:22:60.20:0,60,899	0/0:28,0:28:84.27:0,84,1222	0/0:24,0:24:72.20:0,72,1054	0/0:23,0:23:69.22:0,69,991	0/0:14,0:14:39.13:0,39,571	0/0:28,0:28:81.27:0,81,1213	0/0:16,0:16:48.15:0,48,696	0/0:19,0:19:57.15:0,57,825	0/0:32,0:32:93.32:0,93,1394	0/0:25,0:25:75.25:0,75,1124	0/0:32,0:32:96.33:0,96,1436	0/0:20,0:20:57.18:0,57,833	1/1:0,13:13:39.12:498,39,0	1/1:1,23:24:69.22:891,69,0	1/1:0,39:39:99:1480,114,0	0/0:24,0:24:66.18:0,66,949	0/0:23,0:23:63.20:0,63,921	0/0:32,0:32:96.22:0,96,1370	0/0:23,0:23:66.21:0,66,970	0/0:17,0:17:51.17:0,51,761	1/1:0,26:26:72.23:935,72,0	0/0:12,0:12:36.12:0,36,539
chr10	46655168	.	TACACACAC	T	3069.73	PASS	AB=0.911;AC=38;AF=0.760;AN=50;BaseQRankSum=2.476;DP=548;FS=6.609;HRun=0;HaplotypeScore=143.8940;InbreedingCoeff=0.3675;MQ=50.18;MQ0=32;MQRankSum=-3.879;QD=7.81;ReadPosRankSum=0.983;VQSLOD=2.2175;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:31:12.04:197,12,0	1/1:6,3:9:3.01:75,3,0	./.	./.	1/1:11,4:15:3.01:75,3,0	1/1:12,0:22:9.03:168,9,0	1/1:22,0:27:2.83:52,3,0	0/1:29,0:24:0.14:0,0,0	1/1:14,0:17:14.84:236,15,0	1/1:18,5:21:5.75:97,6,0	1/1:13,1:16:3.01:56,3,0	1/1:10,0:12:5.75:87,6,0	1/1:11,0:12:6.02:112,6,0	1/1:8,7:15:9.50:225,10,0	1/1:13,7:18:18.06:447,18,0	0/1:11,2:16:23.86:242,0,24	1/1:22,4:27:26.68:488,27,0	0/1:19,1:20:56.55:74,0,57	0/0:12,0:12:21.07:0,21,496	0/0:10,0:12:24.06:0,24,487	0/0:26,0:25:18.04:0,18,314	1/1:20,0:22:8.59:167,9,0	1/1:11,0:12:3.01:56,3,0	./.	1/1:12,0:12:3.48:54,3,0	0/1:24,2:26:14.90:252,0,15	0/0:13,0:18:27.09:0,27,533	1/1:4,0:4:3.01:66,3,0
chr10	46655227	.	T	TA	3083.52	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-9.329;DP=613;FS=0.397;HRun=10;HaplotypeScore=135.4784;InbreedingCoeff=0.9929;MQ=64.66;MQ0=2;MQRankSum=-1.105;QD=19.89;ReadPosRankSum=-1.335;VQSLOD=2.1354;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,24:31:47.20:658,47,0	0/0:9,0:9:23.96:0,24,197	0/0:26,0:19:31.85:0,32,239	0/0:27,0:17:31.45:0,31,263	0/0:15,0:15:35.89:0,36,287	0/0:25,0:25:50.59:0,51,416	0/0:20,0:20:47.92:0,48,391	0/0:29,0:29:77.87:0,78,631	1/1:4,15:19:19.81:391,20,0	0/0:17,0:17:39.82:0,40,320	0/0:23,0:24:57.58:0,58,458	1/1:2,17:19:48.12:512,48,0	1/1:4,14:18:36.09:384,36,0	0/0:26,0:27:61.93:0,62,495	0/0:29,0:30:76.92:0,77,618	0/0:14,1:15:12.91:0,13,304	0/0:25,0:26:61.88:0,62,491	0/0:20,0:20:53.45:0,53,432	0/0:22,0:22:56.50:0,56,448	0/0:23,0:23:60.80:0,61,491	0/0:21,0:21:50.88:0,51,413	1/1:6,7:14:21.04:218,21,0	1/1:5,15:21:39.91:401,40,0	1/1:10,23:33:32.20:718,32,0	0/0:14,0:14:38.93:0,39,315	0/0:29,1:30:42.27:0,42,542	0/0:17,0:17:32.94:0,33,271	0/0:18,0:18:53.94:0,54,443
chr10	46658611	.	C	CT	8039.14	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-15.622;DP=622;FS=2.690;HRun=6;HaplotypeScore=59.7292;InbreedingCoeff=0.9975;MQ=72.09;MQ0=0;MQRankSum=-8.175;QD=33.50;ReadPosRankSum=2.745;VQSLOD=5.0154;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,33:37:96.31:1208,96,0	0/0:6,0:6:15.02:0,15,146	0/0:24,0:23:50.98:0,51,504	0/0:34,0:33:70.68:0,71,700	0/0:20,0:20:57.13:0,57,581	0/0:26,0:26:60.12:0,60,612	0/0:21,0:21:57.13:0,57,582	0/0:30,0:30:87.19:0,87,883	1/1:1,17:18:51.16:642,51,0	0/0:30,0:30:87.20:0,87,887	0/0:13,0:13:36.07:0,36,361	1/1:0,26:26:72.23:906,72,0	1/1:1,10:11:30.10:377,30,0	0/0:25,0:25:69.15:0,69,704	0/0:16,0:16:42.05:0,42,412	0/0:27,0:27:78.18:0,78,796	0/0:28,0:28:75.15:0,75,757	0/0:22,0:22:66.15:0,66,673	1/1:3,11:14:36.12:453,36,0	1/1:2,21:23:63.20:793,63,0	1/1:2,14:16:39.12:491,39,0	1/1:1,20:21:60.19:755,60,0	1/1:0,14:14:42.13:529,42,0	1/1:0,25:25:69.22:868,69,0	0/0:18,0:18:45.10:0,45,459	0/0:28,0:28:72.16:0,72,734	1/1:3,32:34:81.26:1019,81,0	0/0:14,0:14:33.07:0,33,337
chr10	46660812	.	G	GACCGTC	35532.05	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-4.648;DP=560;FS=20.846;HRun=0;HaplotypeScore=118.6480;InbreedingCoeff=0.9862;MQ=78.20;MQ0=0;MQRankSum=-10.094;QD=68.59;ReadPosRankSum=5.799;VQSLOD=3.9075;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,14:19:36.12:1159,36,0	1/1:2,6:8:21.07:706,21,0	0/0:23,0:23:59.89:0,60,1123	0/0:19,0:19:51.38:0,51,1205	1/1:8,18:28:33.02:1164,33,0	1/1:1,12:16:24.08:813,24,0	1/1:2,13:17:42.14:1421,42,0	1/1:13,14:28:78.22:2504,78,0	1/1:1,20:25:48.16:1611,48,0	1/1:5,17:26:72.25:2509,72,0	1/1:4,14:19:39.13:1268,39,0	1/1:7,11:15:33.11:1091,33,0	1/1:4,15:25:45.09:1433,45,0	1/1:3,12:19:33.11:1067,33,0	1/1:1,12:14:29.31:943,29,0	1/1:4,20:25:54.19:1774,54,0	1/1:4,16:19:42.14:1255,42,0	1/1:5,9:16:33.11:1131,33,0	1/1:10,9:20:51.18:1742,51,0	1/1:2,12:14:33.11:1169,33,0	1/1:8,15:26:44.72:1299,45,0	1/1:3,10:14:30.10:1046,30,0	1/1:6,15:22:35.91:1230,36,0	1/1:4,13:19:23.67:762,24,0	1/1:4,12:16:36.12:1227,36,0	1/1:10,20:29:84.29:2836,84,0	1/1:6,15:24:54.19:1837,54,0	1/1:0,5:6:15.05:533,15,0
chr10	46663400	.	T	TGGGGTTTTA	37502.64	PASS	AB=0.967;AC=28;AF=0.500;AN=56;BaseQRankSum=-7.782;DP=710;FS=3.247;HRun=0;HaplotypeScore=183.3849;InbreedingCoeff=0.8425;MQ=75.80;MQ0=0;MQRankSum=-20.252;QD=94.23;ReadPosRankSum=-1.698;VQSLOD=4.9305;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,9:23:39.13:1710,39,0	1/1:1,1:3:5.90:287,6,0	0/0:22,0:22:54.18:0,54,1505	0/0:26,0:26:70.41:0,70,1818	0/0:30,0:30:87.27:0,87,2479	0/0:28,0:28:81.25:0,81,2390	0/0:21,0:21:63.22:0,63,1854	0/0:26,0:26:69.24:0,69,2052	1/1:12,18:30:87.30:3872,87,0	0/0:37,0:37:99:0,102,3043	0/0:20,0:20:54.19:0,54,1654	1/1:9,20:32:78.27:3611,78,0	1/1:7,18:26:66.70:3049,67,0	0/0:22,0:22:60.21:0,60,1791	1/1:9,25:35:96.33:4409,96,0	0/1:32,1:33:49.30:49,0,2663	0/0:26,0:26:78.27:0,78,2337	0/0:23,0:23:66.20:0,66,1951	1/1:14,10:29:69.23:2810,69,0	1/1:11,23:35:96.80:3888,97,0	1/1:4,13:20:45.15:2048,45,0	1/1:11,17:31:78.27:3168,78,0	1/1:4,21:26:69.71:2954,70,0	1/1:10,10:21:48.16:1798,48,0	0/0:19,0:19:48.16:0,48,1471	0/1:25,1:26:70.41:70,0,2002	1/1:9,18:27:84.29:3779,84,0	0/0:12,0:12:36.12:0,36,1103
chr10	46663910	.	A	AAAAAC	9076.60	PASS	AB=1.000;AC=45;AF=0.804;AN=56;BaseQRankSum=-0.625;DP=485;FS=6.370;HRun=0;HaplotypeScore=118.7059;InbreedingCoeff=0.1011;MQ=59.10;MQ0=2;MQRankSum=-2.691;QD=19.95;ReadPosRankSum=-0.166;VQSLOD=4.1580;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:20,8:27:61.37:1339,61,0	1/1:2,8:10:14.94:399,15,0	0/0:18,0:9:11:0,11,142	0/0:12,0:7:5.41:0,5,49	1/1:9,0:9:9.63:109,10,0	1/1:7,13:20:33.10:857,33,0	1/1:4,11:14:11.62:264,12,0	0/1:24,0:23:17.40:17,0,178	1/1:5,5:9:9.02:198,9,0	1/1:16,0:16:0.73:105,1,0	1/1:12,0:12:9.07:157,9,0	1/1:9,8:17:18.01:374,18,0	1/1:6,8:15:8.96:254,9,0	0/1:6,0:6:20.79:21,0,21	1/1:11,24:36:48.15:1159,48,0	0/1:12,0:12:18.08:18,0,46	0/1:34,0:33:76.78:118,0,77	1/1:24,0:24:4.03:177,4,0	1/1:22,0:19:51.05:651,51,0	1/1:23,0:23:36.04:535,36,0	0/1:7,0:7:10.54:136,0,11	1/1:9,3:12:21.06:455,21,0	1/1:4,9:13:20.80:500,21,0	1/1:7,17:25:14.52:350,15,0	1/1:17,0:17:34.57:263,35,0	0/1:14,0:13:17.33:17,0,19	1/1:24,0:25:32.96:508,33,0	0/1:9,0:9:35.54:96,0,36
chr10	46663916	.	A	AAAAC	8149.78	PASS	AB=0.972;AC=34;AF=0.607;AN=56;BaseQRankSum=-0.577;DP=502;FS=4.153;HRun=0;HaplotypeScore=111.5915;InbreedingCoeff=-0.3907;MQ=55.22;MQ0=4;MQRankSum=-2.390;QD=17.19;ReadPosRankSum=8.638;VQSLOD=3.7245;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:27,2:28:29.57:872,0,30	0/1:11,0:11:15.37:198,0,15	0/0:15,0:6:12.03:0,12,181	0/0:13,0:8:5.95:0,6,49	0/1:11,0:11:30.71:115,0,31	1/1:19,0:19:33.09:598,33,0	0/1:16,0:15:8.03:169,0,8	0/1:25,0:24:99:222,0,165	0/1:8,0:7:41.06:41,0,71	0/1:21,0:21:29.34:217,0,29	0/1:15,0:15:26.47:238,0,26	0/1:16,1:17:34.95:202,0,35	1/1:13,0:13:7.96:156,8,0	0/1:5,0:5:17.09:17,0,37	0/1:34,0:34:99:567,0,100	0/1:7,0:7:41.62:48,0,42	0/1:37,0:37:73.92:256,0,74	1/1:27,0:27:18.65:339,19,0	1/1:15,6:18:54.05:905,54,0	1/1:3,19:22:36.05:815,36,0	0/1:3,4:7:10.17:210,0,10	1/1:8,0:8:21.03:265,21,0	0/1:14,0:14:29.76:301,0,30	0/1:28,0:28:67.42:139,0,67	1/1:16,0:16:0.22:255,0,0	0/1:19,0:17:17.21:133,0,17	1/1:6,24:31:25.21:709,25,0	0/1:12,0:12:35.52:164,0,36
chr10	46664041	.	C	CAAA	4977.29	PASS	AB=0.988;AC=50;AF=0.893;AN=56;BaseQRankSum=0.549;DP=451;FS=5.189;HRun=11;HaplotypeScore=97.6200;InbreedingCoeff=0.1837;MQ=38.18;MQ0=15;MQRankSum=-0.396;QD=11.44;ReadPosRankSum=0.668;VQSLOD=2.3616;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:19,0:17:32.77:97,0,33	1/1:12,0:9:15.05:205,15,0	0/0:15,0:6:9.21:0,9,60	0/1:14,0:7:1.55:2,0,2	1/1:16,0:15:18.01:247,18,0	1/1:15,0:14:12.04:163,12,0	0/1:13,0:12:54.63:108,0,55	1/1:21,3:22:24.71:295,25,0	1/1:10,0:7:3.01:41,3,0	1/1:20,0:19:32.83:459,33,0	1/1:9,1:11:9.01:111,9,0	1/1:6,0:8:4.98:33,5,0	1/1:14,0:14:6.02:82,6,0	1/1:4,0:8:6.02:86,6,0	1/1:21,0:21:15.05:196,15,0	1/1:14,0:13:8.97:86,9,0	1/1:18,1:16:11.86:128,12,0	1/1:14,0:13:15.94:269,16,0	1/1:17,0:16:26.08:283,26,0	1/1:27,0:28:25.30:307,25,0	1/1:6,0:4:2.99:23,3,0	1/1:16,0:17:27.02:325,27,0	1/1:20,0:21:24.01:284,24,0	1/1:11,0:9:8.86:96,9,0	0/1:19,0:20:23.03:117,0,23	1/1:19,1:19:36.04:515,36,0	1/1:21,0:19:21.07:286,21,0	1/1:11,4:15:15.42:134,15,0
chr10	46664045	.	A	AAAAAAAAAAAC	16549.89	PASS	AB=0.687;AC=50;AF=0.893;AN=56;BaseQRankSum=-4.362;DP=507;FS=21.400;HRun=0;HaplotypeScore=106.2835;InbreedingCoeff=0.1339;MQ=40.78;MQ0=15;MQRankSum=-1.050;QD=33.78;ReadPosRankSum=1.180;VQSLOD=2.6587;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:6,0:21:16.96:390,0,17	1/1:3,0:9:15.05:538,15,0	0/1:19,0:6:15.06:15,0,60	0/0:17,0:9:14.15:0,14,106	1/1:1,14:21:21.07:890,21,0	1/1:4,0:15:12.04:430,12,0	0/1:6,0:13:32.34:324,0,32	1/1:22,0:20:39.59:910,40,0	1/1:3,0:7:3.01:107,3,0	1/1:2,17:23:48.57:1445,49,0	1/1:4,8:13:12.03:517,12,0	1/1:10,0:9:18.92:403,19,0	1/1:3,0:17:6.02:214,6,0	1/1:6,0:6:6.02:306,6,0	1/1:2,0:22:15.05:507,15,0	1/1:2,10:15:8.74:302,9,0	1/1:14,1:13:2.47:504,2,0	1/1:12,2:13:23.10:674,23,0	1/1:7,0:22:57.84:1410,58,0	1/1:5,1:30:36.09:1199,36,0	1/1:2,0:4:3.01:83,3,0	1/1:4,0:19:27.04:821,27,0	1/1:5,0:26:21.49:643,21,0	1/1:7,0:10:11.70:344,12,0	0/1:3,16:23:26.65:470,0,27	1/1:4,17:26:51.15:1806,51,0	1/1:4,0:27:21.07:783,21,0	1/1:13,0:13:26.99:513,27,0
chr10	46665117	.	TTTTG	T	11216.86	PASS	AB=0.561;AC=21;AF=0.375;AN=56;BaseQRankSum=16.597;DP=797;FS=8.819;HRun=0;HaplotypeScore=133.7368;InbreedingCoeff=0.9467;MQ=68.29;MQ0=4;MQRankSum=-3.051;QD=35.95;ReadPosRankSum=0.974;VQSLOD=4.8289;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,147,3655	0/0:16,0:16:39.13:0,39,986	0/0:26,0:20:27.09:0,27,597	0/0:31,0:25:66.21:0,66,1500	1/1:5,26:30:39.13:674,39,0	0/0:21,0:21:57.20:0,57,1442	0/0:24,0:24:63.22:0,63,1574	1/1:12,27:39:81.26:1355,81,0	0/0:28,0:28:69.24:0,69,1744	1/1:9,26:35:81.26:1370,81,0	1/1:4,16:20:39.09:642,39,0	0/0:30,0:30:81.28:0,81,2025	0/0:30,0:30:87.30:0,87,2198	1/1:4,39:43:99:1762,102,0	0/0:30,0:30:72.25:0,72,1816	0/1:7,25:31:3.63:1120,0,4	1/1:4,21:25:48.16:829,48,0	1/1:1,19:20:45.15:778,45,0	0/0:23,0:22:51.18:0,51,1265	0/0:26,0:26:69.71:0,70,1733	0/0:38,0:38:99:0,99,2436	0/0:27,0:27:66.21:0,66,1598	0/0:18,0:18:45.15:0,45,1127	0/0:37,0:37:90.31:0,90,2276	1/1:4,21:25:54.18:933,54,0	1/1:4,26:30:78.27:1339,78,0	0/0:26,0:25:72.25:0,72,1776	1/1:3,9:12:24.08:415,24,0
chr10	46666611	.	CA	C	7101.73	PASS	AB=1.000;AC=31;AF=0.554;AN=56;BaseQRankSum=6.487;DP=625;FS=0.332;HRun=7;HaplotypeScore=82.3679;InbreedingCoeff=0.9400;MQ=65.31;MQ0=4;MQRankSum=1.193;QD=20.70;ReadPosRankSum=4.064;VQSLOD=4.4511;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,36:36:84.19:856,84,0	1/1:0,10:10:27.06:275,27,0	0/1:41,0:19:6.53:7,0,229	0/0:40,0:22:41.30:0,41,339	0/0:27,0:27:78.19:0,78,950	1/1:1,24:25:66.15:673,66,0	1/1:0,16:16:42.09:427,42,0	0/0:40,0:39:99:0,102,1187	1/1:1,21:22:48.11:489,48,0	0/0:19,0:19:57.18:0,57,705	0/0:15,0:14:42.13:0,42,527	1/1:2,12:14:24.05:243,24,0	1/1:0,19:19:36.08:367,36,0	0/0:13,0:13:36.11:0,36,451	1/1:0,20:20:48.11:489,48,0	0/0:19,0:19:51.16:0,51,641	0/0:23,0:23:51.10:0,51,611	0/0:17,0:17:36.12:0,36,452	1/1:2,14:16:32:400,32,0	1/1:4,23:27:60.13:611,60,0	1/1:2,13:15:33.07:337,33,0	1/1:1,10:11:30.06:306,30,0	1/1:2,15:17:42.09:428,42,0	1/1:4,19:23:47.76:488,48,0	0/0:29,0:28:59.21:0,59,864	0/0:29,0:29:78.24:0,78,970	1/1:1,29:30:69.15:704,69,0	0/0:9,0:9:24.08:0,24,302
chr10	46666871	.	TA	T	2738.10	PASS	AB=0.846;AC=31;AF=0.554;AN=56;BaseQRankSum=11.281;DP=453;FS=7.659;HRun=12;HaplotypeScore=44.6906;InbreedingCoeff=0.8663;MQ=54.97;MQ0=13;MQRankSum=0.744;QD=10.78;ReadPosRankSum=4.000;VQSLOD=2.2827;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,15:19:34.89:261,35,0	1/1:1,5:6:14.94:116,15,0	0/0:9,0:7:17.87:0,18,163	0/0:2,0:2:3.01:0,3,30	0/0:22,1:23:24.79:0,25,414	1/1:2,0:19:30.56:89,31,0	1/1:2,0:13:16.29:47,16,0	0/0:41,1:34:48.82:0,49,648	1/1:4,13:16:35.84:276,36,0	0/0:13,0:13:30.05:0,30,300	0/0:14,1:15:7.70:0,8,246	1/1:2,9:11:23.91:186,24,0	1/1:5,5:11:16.03:105,16,0	0/0:9,0:8:18.04:0,18,183	1/1:2,16:17:32.87:255,33,0	0/0:13,0:13:30.06:0,30,305	0/0:21,0:21:59.72:0,60,557	0/0:17,0:14:33.03:0,33,324	1/1:6,10:18:6.50:213,7,0	1/1:3,17:19:17.34:313,17,0	1/1:3,9:11:20.92:163,21,0	1/1:3,7:10:17.86:134,18,0	1/1:2,14:16:32.76:255,33,0	1/1:2,8:9:17.93:139,18,0	0/0:17,1:18:21.86:0,22,403	0/1:18,4:22:29.99:30,0,413	1/1:8,18:27:49.63:377,50,0	0/0:14,0:14:41.92:0,42,410
chr10	46667243	.	C	CAGGAGGAG	9521.59	PASS	AB=1.000;AC=31;AF=0.554;AN=56;BaseQRankSum=-1.476;DP=668;FS=76.412;HRun=0;HaplotypeScore=186.4983;InbreedingCoeff=0.8713;MQ=73.58;MQ0=8;MQRankSum=0.323;QD=23.51;ReadPosRankSum=-0.475;VQSLOD=1.6375;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:32,0:32:55.04:1100,55,0	1/1:5,0:5:12.04:250,12,0	0/0:46,0:35:10.63:0,11,160	0/1:57,0:36:13.01:13,0,115	0/0:18,0:18:11.03:0,11,425	1/1:12,0:12:18.02:321,18,0	1/1:29,0:29:45.15:802,45,0	0/0:15,0:15:3:0,3,26	1/1:16,0:16:24.08:576,24,0	0/0:15,0:15:21.07:0,21,439	0/0:15,0:15:23.97:0,24,427	1/1:27,0:27:48.14:847,48,0	1/1:23,0:22:40.01:808,40,0	0/0:20,0:20:31.77:0,32,541	1/1:23,0:23:42.11:794,42,0	0/0:27,0:27:16.81:0,17,1031	0/0:34,0:34:55.05:0,55,925	0/0:25,0:25:40.08:0,40,640	1/1:20,0:18:21.06:285,21,0	1/1:19,0:19:24.08:585,24,0	1/1:34,0:34:36.10:585,36,0	1/1:24,0:24:39.11:669,39,0	1/1:20,0:20:36.09:485,36,0	1/1:38,0:38:54.18:1157,54,0	0/0:15,0:15:41.97:0,42,729	0/0:20,0:20:29.93:0,30,577	1/1:14,11:25:6.02:246,6,0	0/0:11,0:11:18.06:0,18,311
chr10	46669245	.	A	ACAG	22964.28	PASS	AC=30;AF=0.556;AN=54;BaseQRankSum=-12.820;DP=662;FS=0.000;HRun=0;HaplotypeScore=102.2688;InbreedingCoeff=0.9992;MQ=72.15;MQ0=0;MQRankSum=-4.768;QD=59.80;ReadPosRankSum=5.142;VQSLOD=6.7514;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,29:30:78.27:1920,78,0	1/1:1,11:14:20.24:461,20,0	0/0:19,0:19:45.15:0,45,795	0/0:21,0:21:60.19:0,60,988	0/0:13,0:13:39.13:0,39,727	1/1:4,12:19:42.14:1034,42,0	1/1:4,25:33:78.27:1900,78,0	0/0:28,0:28:84.27:0,84,1505	1/1:1,31:32:96.33:2345,96,0	0/0:18,0:18:51.17:0,51,951	0/0:11,0:11:33.11:0,33,609	1/1:1,32:35:87.30:2142,87,0	1/1:0,22:23:63.22:1551,63,0	0/0:38,0:38:99:0,114,2076	1/1:2,31:34:84.29:2070,84,0	0/0:43,0:43:99:0,129,2398	0/0:23,0:23:69.24:0,69,1283	0/0:21,0:21:63.22:0,63,1175	1/1:6,10:17:48.12:1050,48,0	1/1:1,14:16:41.98:1033,42,0	1/1:4,41:49:99:2732,110,0	1/1:1,14:16:39.10:959,39,0	1/1:3,9:12:30.10:738,30,0	1/1:3,23:27:63.69:1553,64,0	0/0:19,0:19:57.20:0,57,1063	0/0:24,0:23:72.25:0,72,1342	1/1:1,25:27:60.21:1477,60,0	./.
chr10	46670115	.	G	GA	25457.36	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-7.616;DP=682;FS=1.475;HRun=1;HaplotypeScore=62.1848;InbreedingCoeff=0.9946;MQ=82.85;MQ0=0;MQRankSum=-9.363;QD=39.41;ReadPosRankSum=3.830;VQSLOD=5.4895;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,37:37:87.05:1303,87,0	1/1:1,13:14:36.59:540,37,0	0/0:19,0:19:48.10:0,48,570	0/0:17,0:17:23.58:0,24,558	1/1:0,22:22:60.14:872,60,0	1/1:0,29:29:81.21:1186,81,0	1/1:2,24:26:75.25:1122,75,0	1/1:3,24:27:72.19:982,72,0	1/1:1,29:30:78.26:1169,78,0	1/1:0,30:30:90.29:1330,90,0	1/1:0,19:19:45.15:674,45,0	1/1:0,17:17:42.14:629,42,0	1/1:0,17:18:54.18:805,54,0	1/1:1,23:24:63.21:943,63,0	1/1:1,16:17:45.15:674,45,0	1/1:1,27:28:69.23:1034,69,0	1/1:1,25:26:66.22:988,66,0	1/1:3,16:19:54.13:764,54,0	1/1:0,18:18:54.18:806,54,0	1/1:2,30:32:78.26:1169,78,0	1/1:0,36:36:96.33:1438,96,0	1/1:1,25:26:75.21:1099,75,0	1/1:0,29:29:81.27:1213,81,0	1/1:0,25:25:66.22:989,66,0	1/1:0,18:18:45.15:674,45,0	1/1:1,38:39:99:1618,111,0	1/1:0,32:32:78.26:1168,78,0	1/1:0,7:7:18.06:270,18,0
chr10	46671740	.	A	AT	7148.71	PASS	AB=0.794;AC=30;AF=0.536;AN=56;BaseQRankSum=-10.599;DP=676;FS=17.394;HRun=11;HaplotypeScore=68.2089;InbreedingCoeff=0.8348;MQ=69.16;MQ0=1;MQRankSum=-1.048;QD=20.78;ReadPosRankSum=2.637;VQSLOD=4.2026;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,23:28:33.88:525,34,0	1/1:2,9:11:27.05:273,27,0	0/0:18,0:15:29.63:0,30,218	0/1:9,0:8:1.77:2,0,38	0/0:33,0:33:74.65:0,75,579	1/1:3,16:20:27.70:448,28,0	1/1:1,14:18:38.53:336,39,0	0/0:36,0:36:59.63:0,60,458	1/1:2,18:21:53.94:532,54,0	0/0:31,0:33:79.70:0,80,607	0/0:22,0:22:50.79:0,51,395	0/1:6,14:20:24.71:307,0,25	1/1:7,19:26:35.69:527,36,0	0/0:23,0:24:64.77:0,65,489	1/1:3,29:32:40.69:769,41,0	0/0:38,0:38:89.58:0,90,697	0/0:32,3:35:1.32:0,1,556	0/0:23,1:24:26.32:0,26,387	1/1:8,15:24:28.17:449,28,0	1/1:1,18:20:56.95:562,57,0	1/1:4,19:23:48.10:487,48,0	1/1:2,20:23:62.96:623,63,0	1/1:3,14:19:29.06:313,29,0	1/1:4,15:21:4.30:378,4,0	0/0:19,0:20:46.82:0,47,354	0/0:37,0:38:95.60:0,96,743	1/1:6,21:28:56.17:619,56,0	0/0:11,0:11:29.88:0,30,232
chr10	46672604	.	TCA	T	1558.36	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=8.985;DP=688;FS=0.000;HRun=0;HaplotypeScore=111.5733;InbreedingCoeff=0.8408;MQ=73.79;MQ0=0;MQRankSum=-0.963;QD=27.34;ReadPosRankSum=0.988;VQSLOD=4.9398;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,120,2181	1/1:0,9:9:27.09:398,27,0	0/0:9,0:9:17.89:0,18,270	0/1:18,0:18:2.39:2,0,313	0/0:25,0:25:75.26:0,75,1377	0/0:24,0:24:69.24:0,69,1292	0/0:39,0:39:99:0,117,2112	0/0:20,0:19:51.11:0,51,828	0/0:20,0:20:60.19:0,60,1091	0/0:29,0:29:81.25:0,81,1429	0/0:16,0:16:48.15:0,48,867	0/0:34,0:34:99:0,102,1845	0/0:22,0:22:63.22:0,63,1180	0/0:31,0:31:93.32:0,93,1735	1/1:0,30:30:87.29:1281,87,0	0/0:20,0:20:60.16:0,60,1021	0/0:34,0:34:99:0,102,1897	0/0:23,0:23:69.24:0,69,1281	0/0:23,0:23:69.22:0,69,1231	0/0:25,0:25:69.24:0,69,1285	0/0:54,0:54:99:0,153,2828	0/0:19,0:19:57.20:0,57,1060	0/0:26,0:26:78.25:0,78,1419	0/0:32,0:32:96.30:0,96,1735	0/0:23,0:23:69.23:0,69,1262	0/0:19,0:19:57.17:0,57,1006	0/0:19,0:19:57.18:0,57,1035	0/0:5,0:5:15.05:0,15,269
chr10	46676652	.	CAT	C	2367.41	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.897;DP=732;FS=6.005;HRun=0;HaplotypeScore=84.2885;InbreedingCoeff=0.9989;MQ=88.00;MQ0=1;MQRankSum=-2.595;QD=43.84;ReadPosRankSum=1.491;VQSLOD=5.3366;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,99,1934	0/0:9,0:9:27.08:0,27,512	0/0:30,0:30:72.65:0,73,1687	0/0:22,0:22:57.19:0,57,1060	0/0:29,0:29:87.30:0,87,1767	1/1:0,30:29:81.28:1322,81,0	1/1:0,24:24:72.25:1167,72,0	0/0:29,0:29:87.30:0,87,1758	0/0:24,0:24:72.25:0,72,1462	0/0:37,0:37:99:0,111,2247	0/0:17,0:17:51.18:0,51,1035	0/0:22,0:22:66.23:0,66,1341	0/0:27,0:27:81.28:0,81,1645	0/0:30,0:30:87.30:0,87,1724	0/0:35,0:35:99:0,105,2103	0/0:28,0:28:84.27:0,84,1670	0/0:36,0:36:99:0,108,2194	0/0:23,0:22:69.24:0,69,1372	0/0:18,0:17:48.16:0,48,968	0/0:27,0:27:81.28:0,81,1624	0/0:26,0:26:75.26:0,75,1511	0/0:25,0:25:75.26:0,75,1512	0/0:16,0:16:48.16:0,48,975	0/0:38,0:38:99:0,114,2297	0/0:27,0:27:81.28:0,81,1635	0/0:31,0:31:93.32:0,93,1888	0/0:28,0:28:84.29:0,84,1684	0/0:9,0:9:27.09:0,27,546
chr10	46679451	.	G	GT	10732.36	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-14.365;DP=586;FS=7.233;HRun=4;HaplotypeScore=56.2167;InbreedingCoeff=0.9836;MQ=89.56;MQ0=0;MQRankSum=-2.689;QD=34.73;ReadPosRankSum=2.040;VQSLOD=5.4066;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,25:26:63.21:861,63,0	1/1:0,6:6:12.04:164,12,0	0/0:26,0:26:60.51:0,61,751	0/0:24,0:24:43.94:0,44,521	0/0:25,0:25:75.20:0,75,838	1/1:1,30:31:81.27:1108,81,0	1/1:0,23:23:66.22:902,66,0	0/0:35,0:35:93.25:0,93,1044	1/1:1,19:20:57.19:779,57,0	0/0:22,0:22:63.16:0,63,705	0/0:21,0:21:60.15:0,60,670	1/1:4,18:22:54.17:724,54,0	1/1:2,19:21:60.20:818,60,0	0/0:19,0:19:57.14:0,57,628	1/1:0,26:26:69.23:944,69,0	0/0:18,1:19:7.09:0,7,451	0/0:11,0:11:30.06:0,30,328	0/0:10,0:10:30.04:0,30,326	1/1:2,12:13:39.10:499,39,0	1/1:3,15:18:39.04:491,39,0	1/1:1,25:26:69.23:944,69,0	1/1:0,12:12:24.08:328,24,0	1/1:4,17:22:48.16:653,48,0	1/1:0,13:13:36.12:492,36,0	0/0:17,0:17:51.15:0,51,578	0/0:27,0:27:78.21:0,78,875	1/1:3,26:29:75.24:1025,75,0	0/0:21,0:21:57.16:0,57,646
chr10	46680268	.	C	CA	372.03	PASS	AB=0.978;AC=7;AF=0.125;AN=56;BaseQRankSum=-2.248;DP=641;FS=2.901;HRun=11;HaplotypeScore=94.2840;InbreedingCoeff=0.4942;MQ=66.51;MQ0=0;MQRankSum=1.220;QD=3.15;ReadPosRankSum=-1.310;VQSLOD=0.3341;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:24:63.85:0,64,476	1/1:1,5:7:14.86:136,15,0	0/1:29,0:21:11.93:12,0,57	0/1:27,0:19:41.58:42,0,56	0/0:27,0:28:49.08:0,49,454	0/0:17,1:18:14.46:0,14,294	0/1:25,2:28:3.14:3,0,359	0/0:29,0:29:16.06:0,16,248	0/0:21,0:21:31.44:0,31,210	0/0:33,0:33:84.82:0,85,647	0/0:20,0:20:40.47:0,40,378	0/0:25,0:25:60.97:0,61,434	0/0:20,0:20:42.90:0,43,314	0/0:26,0:26:63.91:0,64,485	1/1:4,22:26:12.57:310,13,0	0/0:22,0:24:57.76:0,58,423	0/0:26,0:26:59.67:0,60,459	0/0:17,0:18:17.49:0,17,217	0/0:20,1:21:17.31:0,17,313	0/0:18,0:18:34.07:0,34,258	0/0:12,0:12:29.87:0,30,232	0/0:19,0:19:50.69:0,51,383	0/0:15,0:16:10.51:0,11,253	0/0:18,0:18:41.82:0,42,322	0/0:17,0:17:6.78:0,7,243	0/0:34,0:34:61.16:0,61,539	0/0:35,2:37:22.65:0,23,531	0/0:19,0:19:34.63:0,35,351
chr10	46681227	.	GC	G	11916.33	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=15.713;DP=670;FS=2.853;HRun=4;HaplotypeScore=67.0505;InbreedingCoeff=0.9957;MQ=72.61;MQ0=2;MQRankSum=-3.449;QD=32.65;ReadPosRankSum=3.654;VQSLOD=5.5761;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,48:48:99:1548,129,0	1/1:0,13:13:36.11:432,36,0	0/0:18,0:15:40.18:0,40,499	0/0:24,0:20:54:0,54,688	0/0:25,0:25:72.24:0,72,1006	1/1:2,25:27:75.23:900,75,0	1/1:0,25:25:63.19:756,63,0	0/0:34,0:34:96.30:0,96,1313	1/1:1,22:23:66.20:792,66,0	0/0:25,0:25:72.22:0,72,975	0/0:15,0:15:45.14:0,45,612	1/1:1,25:26:75.23:900,75,0	1/1:0,27:27:78.24:936,78,0	0/0:25,0:25:72.23:0,72,990	1/1:0,28:28:78.24:936,78,0	0/0:34,0:34:96.32:0,96,1344	0/0:34,0:34:96.32:0,96,1344	0/0:13,0:13:39.13:0,39,546	1/1:3,18:21:54.16:648,54,0	1/1:1,22:23:60.18:720,60,0	1/1:2,24:26:57.17:684,57,0	1/1:1,16:17:48.15:576,48,0	1/1:1,19:20:54.16:648,54,0	1/1:0,18:18:51.16:612,51,0	0/0:20,0:20:60.20:0,60,840	0/0:34,0:34:99:0,102,1418	1/1:0,23:23:69.21:828,69,0	0/0:4,0:4:12.04:0,12,168
chr10	46682870	.	C	CT	2583.35	PASS	AB=0.776;AC=25;AF=0.446;AN=56;BaseQRankSum=2.580;DP=637;FS=17.989;HRun=14;HaplotypeScore=99.5598;InbreedingCoeff=0.6059;MQ=63.38;MQ0=11;MQRankSum=0.213;QD=7.97;ReadPosRankSum=0.014;VQSLOD=0.9268;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:18,28:48:19.91:565,0,20	1/1:6,7:13:11.78:127,12,0	0/0:32,0:11:1.85:0,2,26	0/0:28,0:15:8.67:0,9,58	0/1:18,1:22:0.19:0,0,152	0/1:12,0:12:1.52:2,0,62	0/0:25,2:27:1.20:0,1,244	0/0:31,0:31:49.47:0,49,313	1/1:3,11:15:27.01:218,27,0	0/0:22,0:23:52.25:0,52,332	0/0:12,0:12:20.48:0,20,134	0/1:12,9:21:18.38:132,0,18	1/1:15,7:22:14.08:226,14,0	0/0:21,0:24:37.25:0,37,231	0/1:10,18:28:23.08:315,0,23	0/0:18,1:19:9.54:0,10,186	0/0:20,0:22:39.38:0,39,240	0/0:25,1:27:14.16:0,14,258	1/1:20,0:25:27.95:148,28,0	1/1:9,2:18:15.47:73,15,0	1/1:4,0:11:8.99:43,9,0	1/1:6,7:13:17.68:142,18,0	1/1:7,10:19:20.68:160,21,0	1/1:6,22:29:44.55:359,45,0	0/0:22,0:21:29.49:0,29,224	0/0:18,0:20:45.39:0,45,280	1/1:11,0:25:52.01:274,52,0	0/0:19,1:20:16.19:0,16,215
chr10	46684533	.	A	AGT	12003.76	PASS	AB=0.842;AC=51;AF=0.911;AN=56;BaseQRankSum=1.123;DP=549;FS=3.744;HRun=0;HaplotypeScore=172.9591;InbreedingCoeff=0.5350;MQ=63.19;MQ0=8;MQRankSum=-3.043;QD=24.15;ReadPosRankSum=2.558;VQSLOD=5.7071;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:25,2:27:45:633,45,0	1/1:4,0:4:3.01:47,3,0	0/0:24,0:12:17.77:0,18,173	0/0:28,0:22:39.01:0,39,485	1/1:5,1:7:5.98:79,6,0	1/1:14,2:15:33.11:493,33,0	1/1:27,5:32:66.80:948,67,0	1/1:28,0:27:45.91:600,46,0	1/1:13,2:15:34.03:386,34,0	1/1:8,4:12:29.91:395,30,0	1/1:6,0:6:8.91:99,9,0	1/1:26,2:28:62.56:850,63,0	1/1:8,1:9:24.07:386,24,0	1/1:32,5:37:68.27:950,68,0	1/1:20,4:24:54.06:741,54,0	1/1:12,3:15:33.09:454,33,0	1/1:30,3:33:53.71:715,54,0	1/1:20,0:20:39:527,39,0	1/1:23,0:23:9.65:476,10,0	1/1:2,0:2:3.01:36,3,0	1/1:63,1:62:78.31:875,78,0	1/1:8,0:8:0.80:65,1,0	1/1:2,1:3:9.03:133,9,0	0/1:26,5:32:18.15:642,0,18	1/1:7,4:11:23.66:256,24,0	1/1:20,6:25:68.92:887,69,0	1/1:6,0:6:14.85:150,15,0	1/1:8,0:8:12.04:177,12,0
chr10	46684544	.	GTT	G	4521.74	PASS	AB=0.953;AC=38;AF=0.679;AN=56;BaseQRankSum=-2.820;DP=565;FS=18.790;HRun=3;HaplotypeScore=191.3225;InbreedingCoeff=-0.1731;MQ=53.76;MQ0=13;MQRankSum=1.371;QD=8.47;ReadPosRankSum=-2.146;VQSLOD=-0.2384;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:21,2:23:22.78:150,0,23	0/0:3,0:3:2.60:0,3,11	0/0:27,0:7:14.10:0,14,171	0/1:34,0:24:16.25:16,0,315	1/1:6,0:6:1.59:26,2,0	0/1:21,0:20:75.25:88,0,75	0/1:30,1:31:99:194,0,137	0/1:26,0:24:99:169,0,142	0/1:12,1:13:39.40:65,0,39	0/1:11,0:11:3.77:84,0,4	1/1:6,0:6:4.57:48,5,0	0/1:38,1:38:63.16:179,0,63	0/1:12,0:11:26.84:27,0,63	1/1:38,1:39:27.69:287,28,0	1/1:23,1:24:20.08:253,20,0	1/1:16,0:16:21.60:208,22,0	1/1:33,2:35:46.06:347,46,0	1/1:19,0:19:30.19:248,30,0	1/1:16,5:21:24.18:418,24,0	0/1:1,1:2:10.59:11,0,11	1/1:39,22:59:56.01:928,56,0	0/1:6,0:6:21.14:24,0,21	0/1:4,0:4:7.98:8,0,23	0/1:33,2:35:65.50:169,0,65	1/1:10,0:10:10.64:86,11,0	0/1:28,1:29:1.33:256,0,1	1/1:3,3:6:10.95:173,11,0	1/1:3,1:4:8.13:58,8,0
chr10	46684545	.	T	TG	2683.06	PASS	AB=0.872;AC=39;AF=0.696;AN=56;BaseQRankSum=-0.501;DP=563;FS=0.411;HRun=1;HaplotypeScore=192.2415;InbreedingCoeff=-0.2009;MQ=53.64;MQ0=13;MQRankSum=4.726;QD=5.40;ReadPosRankSum=7.020;VQSLOD=0.1707;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:16,5:21:26.83:278,27,0	1/1:2,1:3:2.95:22,3,0	0/0:29,0:7:21.06:0,21,267	0/0:37,0:25:65.70:0,66,719	1/1:6,0:6:4.43:52,4,0	0/1:16,5:20:27.82:121,0,28	1/1:22,8:30:10.90:229,11,0	0/1:26,0:24:14.64:15,0,310	1/1:6,7:13:7.04:137,7,0	0/1:11,0:11:22.86:23,0,26	1/1:5,1:6:7.10:51,7,0	0/1:30,9:38:7.42:202,0,7	1/1:6,6:11:4.69:137,5,0	0/1:36,3:39:40.42:147,0,40	0/1:16,8:24:16.63:164,0,17	0/1:11,5:16:27.24:135,0,27	0/1:31,2:33:73.70:126,0,74	0/1:17,1:18:16.58:17,0,77	0/1:20,0:21:89.25:89,0,95	1/1:2,0:2:3.01:36,3,0	1/1:60,0:58:55.62:333,56,0	0/1:3,3:6:21.38:44,0,21	1/1:4,0:4:6.65:28,7,0	0/1:26,9:35:41.02:216,0,41	1/1:7,3:10:3.11:87,3,0	0/1:30,1:30:94.53:95,0,154	1/1:6,0:6:8.35:42,8,0	1/1:4,0:4:5.54:20,6,0
chr10	46684546	.	T	TTTG	2058.96	PASS	AB=0.808;AC=26;AF=0.464;AN=56;BaseQRankSum=4.589;DP=573;FS=4.437;HRun=0;HaplotypeScore=215.4813;InbreedingCoeff=-0.0365;MQ=53.34;MQ0=13;MQRankSum=-1.111;QD=5.63;ReadPosRankSum=-1.207;VQSLOD=2.6544;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:13,5:21:14.09:202,0,14	1/1:1,0:2:3:34,3,0	0/0:30,0:7:21.06:0,21,256	0/0:37,0:25:54.81:0,55,571	1/1:6,0:6:4.67:23,5,0	0/1:16,5:21:10.23:162,0,10	0/1:20,8:29:43.47:190,0,43	0/0:26,0:24:38.41:0,38,337	0/1:4,7:13:25.96:126,0,26	0/1:13,0:13:5.25:5,0,61	1/1:6,0:7:1.17:3,1,0	0/1:24,9:39:11.83:407,0,12	1/1:6,6:12:23.62:325,24,0	0/1:37,0:40:85.83:86,0,121	1/1:16,1:25:1.99:137,2,0	0/1:11,0:16:63.96:85,0,64	0/1:31,0:33:29.69:30,0,191	0/0:17,0:18:8.30:0,8,123	0/0:21,0:21:31.92:0,32,251	1/1:2,0:2:2.96:19,3,0	0/0:60,0:58:41.35:0,41,277	1/1:3,3:6:5.18:27,5,0	0/0:5,0:5:2.84:0,3,12	0/1:24,9:37:87.40:228,0,87	0/1:7,0:10:21.15:28,0,21	0/1:30,0:30:99:107,0,273	0/0:6,0:6:9.38:0,9,52	0/0:4,0:4:4.09:0,4,14
chr10	46684591	.	AGTGT	A	4773.33	PASS	AB=0.607;AC=37;AF=0.804;AN=46;BaseQRankSum=-2.105;DP=587;FS=18.457;HRun=0;HaplotypeScore=178.0478;InbreedingCoeff=0.1762;MQ=40.53;MQ0=11;MQRankSum=-0.265;QD=10.03;ReadPosRankSum=3.671;VQSLOD=2.8675;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:6,27:33:35.99:575,36,0	./.	0/0:49,0:7:12.04:0,12,195	0/0:48,0:8:2.91:0,3,23	0/1:1,0:7:0:0,0,0	0/1:9,1:21:30.52:31,0,88	0/1:8,1:30:17.44:17,0,104	1/1:5,0:26:1.99:216,2,0	1/1:8,10:20:11.04:271,11,0	1/1:3,0:13:21.02:195,21,0	./.	1/1:21,6:27:4.83:189,5,0	1/1:9,4:12:15.19:210,15,0	0/1:11,0:26:19.24:19,0,25	1/1:10,0:16:2.59:28,3,0	1/1:9,0:16:5.96:53,6,0	1/1:10,0:31:7.45:187,7,0	0/1:10,0:21:25.73:122,0,26	1/1:2,13:15:33.06:475,33,0	./.	1/1:24,50:72:42.94:844,43,0	1/1:3,2:5:5.95:101,6,0	1/1:2,2:4:3.01:51,3,0	1/1:14,23:37:29.72:467,30,0	./.	1/1:6,0:27:14.69:368,15,0	1/1:1,10:11:21:354,21,0	./.
chr10	46684606	.	GTGTGTA	G	2084.40	PASS	AB=0.972;AC=15;AF=0.288;AN=52;BaseQRankSum=3.067;DP=549;FS=6.905;HRun=0;HaplotypeScore=163.3962;InbreedingCoeff=-0.3419;MQ=45.19;MQ0=9;MQRankSum=-7.696;QD=8.30;ReadPosRankSum=2.255;VQSLOD=1.7146;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:22.93:0,23,146	./.	0/0:40,0:8:17.92:0,18,279	0/0:35,0:4:1.77:0,2,25	1/1:6,0:6:0.47:1,0,0	0/0:24,0:23:32.11:0,32,340	0/0:29,0:29:50.79:0,51,622	0/1:27,0:27:56.43:399,0,56	0/1:20,0:20:22.17:22,0,99	0/1:15,0:15:99:289,0,108	0/0:3,0:3:2.99:0,3,23	0/1:24,1:25:57.19:57,0,113	0/1:10,0:10:26.30:26,0,51	0/1:20,6:26:64.55:65,0,96	0/1:10,2:12:59.65:61,0,60	0/1:12,0:12:16:53,0,16	0/1:25,0:25:8.50:354,0,9	0/1:20,0:20:61.99:201,0,62	0/1:15,0:15:47.79:48,0,140	0/0:2,0:2:2.98:0,3,22	0/0:75,0:75:6.04:0,6,270	0/0:5,0:5:10.19:0,10,56	0/0:4,0:4:5.20:0,5,28	0/0:38,0:38:26.21:0,26,132	./.	0/1:27,0:27:70.85:642,0,71	0/1:11,0:11:6.65:7,0,19	0/0:2,0:2:5.99:0,6,48
chr10	46684608	.	GTGTA	G	2373.13	PASS	AB=0.976;AC=19;AF=0.365;AN=52;BaseQRankSum=8.321;DP=547;FS=3.500;HRun=0;HaplotypeScore=146.9155;InbreedingCoeff=-0.4616;MQ=45.70;MQ0=9;MQRankSum=-3.818;QD=5.92;ReadPosRankSum=10.376;VQSLOD=1.1779;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:31,1:32:28.03:309,0,28	./.	0/0:40,0:9:17.45:0,17,212	0/0:32,0:4:1.77:0,2,25	0/0:7,0:7:2.67:0,3,24	0/0:24,0:23:0.51:0,1,137	0/0:28,0:28:25.09:0,25,335	0/1:29,0:29:99:192,0,103	0/1:20,0:20:77.13:114,0,77	0/1:16,0:16:66.14:66,0,134	0/0:3,0:3:2.99:0,3,23	0/1:21,4:25:99:172,0,111	0/1:8,3:11:20.15:161,0,20	0/1:25,0:25:39.41:39,0,96	0/1:12,0:12:26.15:26,0,59	0/1:11,0:11:16.52:23,0,17	0/1:26,0:26:45.53:91,0,46	0/1:19,0:19:51.57:52,0,65	0/1:15,0:15:50.73:201,0,51	0/0:2,0:2:2.98:0,3,22	0/1:75,0:75:99:409,0,157	0/1:5,0:5:0.22:57,0,0	0/1:4,0:4:14.99:21,0,15	0/1:37,1:38:11.67:248,0,12	./.	0/1:27,0:27:99:142,0,123	1/1:11,0:11:20.58:195,21,0	0/0:2,0:2:5.99:0,6,48
chr10	46685446	.	AGTCCT	A	8243.72	PASS	AB=0.563;AC=21;AF=0.375;AN=56;BaseQRankSum=13.577;DP=510;FS=5.468;HRun=0;HaplotypeScore=102.5014;InbreedingCoeff=0.9172;MQ=86.67;MQ0=0;MQRankSum=-6.173;QD=42.06;ReadPosRankSum=1.417;VQSLOD=4.7718;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:81.28:0,81,2368	0/0:13,0:13:36.12:0,36,1026	0/0:24,0:24:63.22:0,63,1811	0/0:15,0:14:39.13:0,39,1039	1/1:0,11:11:18.06:339,18,0	0/0:12,0:12:36.12:0,36,1073	0/0:27,0:27:72.25:0,72,2115	1/1:9,16:25:42.13:751,42,0	0/0:20,0:20:51.17:0,51,1523	1/1:5,12:17:36.12:696,36,0	1/1:0,9:9:18.06:357,18,0	0/0:18,0:18:54.19:0,54,1612	0/0:15,0:15:42.14:0,42,1206	1/1:2,22:24:60.21:1169,60,0	0/0:16,0:16:42.14:0,42,1254	0/1:4,14:18:53.50:619,0,53	1/1:3,26:29:72.23:1407,72,0	1/1:3,21:24:51.13:973,51,0	0/0:16,0:16:36.12:0,36,1006	0/0:8,0:8:18.06:0,18,537	0/0:37,0:37:99:0,102,2951	0/0:7,0:7:15.05:0,15,433	0/0:9,0:9:21.07:0,21,618	0/0:22,0:22:54.19:0,54,1611	1/1:3,15:18:39.13:774,39,0	1/1:3,8:11:30.10:563,30,0	0/0:23,0:23:69.22:0,69,1872	1/1:0,10:10:30.10:596,30,0
chr10	46685923	.	G	GC	3719.19	PASS	AB=0.647;AC=35;AF=0.625;AN=56;BaseQRankSum=-3.386;DP=450;FS=6.360;HRun=10;HaplotypeScore=64.2907;InbreedingCoeff=-0.3465;MQ=87.06;MQ0=0;MQRankSum=-1.204;QD=9.14;ReadPosRankSum=1.230;VQSLOD=2.2353;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:17,19:36:80.53:158,0,81	1/1:5,0:5:8.82:54,9,0	0/0:27,0:26:9.43:0,9,175	0/0:13,0:14:6.56:0,7,66	0/1:2,4:6:12.61:84,0,13	1/1:4,5:11:8.72:60,9,0	1/1:5,1:14:14.31:75,14,0	0/1:12,4:17:16.99:54,0,17	0/1:5,15:20:11.07:280,0,11	1/1:1,8:9:15.02:149,15,0	1/1:3,4:8:14.95:145,15,0	0/1:13,17:30:30.68:110,0,31	0/1:6,16:22:58.54:220,0,59	0/1:4,8:12:18.63:26,0,19	1/1:16,3:19:47.33:337,47,0	0/1:7,11:18:14.95:257,0,15	0/1:9,15:24:84.05:217,0,84	0/1:8,14:22:53.45:307,0,53	1/1:5,11:16:8.28:263,8,0	1/1:1,8:9:13.23:115,13,0	0/1:15,13:30:50.74:159,0,51	0/1:3,5:8:30.74:81,0,31	0/1:4,2:6:23.62:24,0,24	0/1:10,7:17:45.38:136,0,45	1/1:3,2:5:6.01:64,6,0	0/1:12,5:17:31.18:106,0,31	0/1:8,10:18:22.64:174,0,23	0/1:2,5:8:12.78:66,0,13
chr10	46685926	.	C	CA	775.11	PASS	AB=1.000;AC=16;AF=0.286;AN=56;BaseQRankSum=4.510;DP=458;FS=19.283;HRun=0;HaplotypeScore=71.3624;InbreedingCoeff=-0.0670;MQ=85.05;MQ0=0;MQRankSum=-2.476;QD=3.88;ReadPosRankSum=10.064;VQSLOD=1.1456;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:19.75:0,20,391	1/1:0,4:4:9.03:125,9,0	0/0:29,0:26:63.16:0,63,633	0/0:13,0:13:23.37:0,23,218	0/1:6,0:6:8.88:9,0,33	0/0:11,0:11:8.02:0,8,69	0/0:16,0:16:32.28:0,32,239	0/0:15,0:15:15.46:0,15,262	0/1:18,0:18:41.44:41,0,78	0/1:10,0:10:14.34:14,0,35	0/1:7,0:7:3.75:4,0,38	0/0:28,0:28:12.78:0,13,214	0/1:23,0:23:16.68:17,0,161	0/0:12,0:12:5.70:0,6,78	1/1:3,14:18:48.15:639,48,0	0/1:18,0:18:16.15:16,0,111	0/1:23,0:23:6.76:7,0,226	0/1:21,0:21:21.47:21,0,177	0/1:17,0:17:15.55:16,0,127	0/1:9,0:9:3.28:3,0,81	0/0:29,0:29:19.69:0,20,336	0/0:9,0:9:1.68:0,2,115	0/0:10,0:10:17.81:0,18,196	0/0:17,0:17:8.73:0,9,253	0/1:8,0:8:2.96:3,0,35	0/0:19,0:19:15.63:0,16,268	0/1:18,0:18:13.79:14,0,115	0/0:8,0:8:1.06:0,1,63
chr10	46686657	.	AT	A	7399.95	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=12.626;DP=541;FS=5.722;HRun=7;HaplotypeScore=52.8062;InbreedingCoeff=0.9987;MQ=80.10;MQ0=0;MQRankSum=-2.146;QD=25.52;ReadPosRankSum=4.445;VQSLOD=5.2415;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,31:32:81.18:826,81,0	1/1:1,10:11:30.07:306,30,0	0/0:17,0:17:42.11:0,42,491	0/0:9,0:9:21.06:0,21,248	0/0:28,0:28:84.24:0,84,1022	1/1:2,26:28:63.14:642,63,0	1/1:0,12:12:30.07:306,30,0	0/0:36,0:36:99:0,99,1213	1/1:2,16:18:48.11:490,48,0	0/0:24,0:24:66.17:0,66,802	0/0:22,0:22:60.15:0,60,712	1/1:0,19:19:51.12:520,51,0	1/1:3,21:24:57.13:581,57,0	0/0:15,0:15:33.04:0,33,371	1/1:0,24:24:66.15:673,66,0	0/0:11,0:11:33.11:0,33,415	0/0:16,0:16:42.13:0,42,528	0/0:10,0:10:24.06:0,24,288	1/1:3,10:13:27.05:275,27,0	1/1:0,22:22:57.02:558,57,0	1/1:4,12:16:30.06:306,30,0	1/1:0,15:15:42.06:417,42,0	1/1:0,16:16:38.98:398,39,0	1/1:0,13:13:39.09:398,39,0	0/0:17,0:17:48.14:0,48,592	0/0:32,0:32:90.29:0,90,1132	1/1:3,24:27:69.16:704,69,0	0/0:14,0:14:39.12:0,39,490
chr10	46688945	.	AG	A	192.33	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.871;DP=484;FS=0.000;HRun=1;HaplotypeScore=90.6200;InbreedingCoeff=0.8907;MQ=54.91;MQ0=7;MQRankSum=-5.912;QD=9.62;ReadPosRankSum=0.931;VQSLOD=1.1986;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:84.29:0,84,1335	0/0:1,0:1:3.01:0,3,48	0/0:13,0:6:12.01:0,12,156	0/0:19,0:8:20.86:0,21,292	0/0:26,0:26:57.18:0,57,887	1/1:1,8:9:23.61:152,24,0	1/1:1,10:10:26.46:160,26,0	0/0:31,0:31:90.26:0,90,1408	0/0:14,0:14:39.13:0,39,623	0/0:15,0:14:42.14:0,42,643	0/0:17,0:16:39.13:0,39,623	0/0:12,0:12:33.11:0,33,525	0/0:9,0:9:27.09:0,27,431	0/0:17,0:17:42.14:0,42,671	0/0:15,0:15:36.11:0,36,552	0/0:11,0:11:30.10:0,30,472	0/0:31,0:31:69.17:0,69,1050	0/0:11,0:11:33.11:0,33,511	0/0:21,0:21:63.17:0,63,959	0/0:26,0:26:75.26:0,75,1190	0/0:11,0:10:24.08:0,24,384	0/0:13,0:13:36.11:0,36,553	0/0:20,0:20:51.16:0,51,787	0/0:30,0:30:72.12:0,72,1124	0/0:18,0:18:48.13:0,48,713	0/0:21,0:20:60.20:0,60,959	0/0:22,0:22:66.22:0,66,1046	0/0:7,0:7:15.05:0,15,226
chr10	46688950	.	AAG	A	419.32	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.030;DP=488;FS=0.898;HRun=0;HaplotypeScore=103.4447;InbreedingCoeff=0.8735;MQ=53.37;MQ0=9;MQRankSum=-5.964;QD=22.07;ReadPosRankSum=0.938;VQSLOD=4.0872;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:93.27:0,93,1777	0/0:1,0:1:3.01:0,3,55	0/0:10,0:5:9.01:0,9,104	0/0:18,0:5:12.04:0,12,240	0/0:26,0:26:63.21:0,63,1181	1/1:0,8:8:24.06:247,24,0	1/1:1,10:10:30:293,30,0	0/0:33,0:32:90.31:0,90,1774	0/0:15,0:15:42.09:0,42,757	0/0:13,0:12:36.09:0,36,691	0/0:16,0:15:39.13:0,39,769	0/0:12,0:12:36.12:0,36,708	0/0:10,0:10:30.10:0,30,587	0/0:19,0:19:51.16:0,51,953	0/0:19,0:19:51.64:0,52,937	0/0:10,0:9:27.09:0,27,548	0/0:31,0:31:75.21:0,75,1436	0/0:11,0:11:33.11:0,33,669	0/0:21,0:21:63.22:0,63,1258	0/0:25,0:25:75.26:0,75,1499	0/0:10,0:9:24.07:0,24,429	0/0:11,0:11:30.10:0,30,608	0/0:20,0:20:51.17:0,51,1011	0/0:28,0:28:66.04:0,66,1319	0/0:17,0:16:42.13:0,42,801	0/0:24,0:23:69.24:0,69,1330	0/0:24,0:24:72.20:0,72,1394	0/0:9,0:9:21.07:0,21,407
chr10	46688976	.	TA	T	2530.41	PASS	AB=0.861;AC=42;AF=0.750;AN=56;BaseQRankSum=-2.166;DP=491;FS=1.948;HRun=16;HaplotypeScore=108.0790;InbreedingCoeff=0.6709;MQ=51.04;MQ0=23;MQRankSum=-1.421;QD=6.41;ReadPosRankSum=3.245;VQSLOD=2.9744;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:17,20:37:15.40:281,15,0	0/0:3,0:3:8.94:0,9,65	0/0:23,0:4:3.79:0,4,44	0/1:19,0:4:2.06:2,0,10	1/1:8,16:25:26.97:163,27,0	0/0:12,0:16:29.08:0,29,151	0/0:16,0:22:37.34:0,37,188	1/1:14,6:18:18.62:101,19,0	1/1:7,5:12:0.06:78,0,0	1/1:4,5:11:20.75:107,21,0	1/1:5,5:10:11.70:72,12,0	1/1:5,6:11:22.23:123,22,0	1/1:5,7:11:13.55:88,14,0	1/1:11,5:17:4.13:103,4,0	0/0:23,1:24:6.89:0,7,219	1/1:7,5:11:19.31:106,19,0	1/1:8,23:33:27.94:269,28,0	0/1:8,5:11:1.12:69,0,1	1/1:11,8:19:23.10:143,23,0	1/1:8,12:21:28.43:167,28,0	0/0:5,1:4:3.45:0,3,22	1/1:4,3:6:2.86:18,3,0	1/1:9,8:18:20.42:107,20,0	1/1:11,8:21:21.51:119,22,0	1/1:11,4:12:11.04:70,11,0	1/1:11,11:22:12.63:176,13,0	1/1:10,11:24:32.22:266,32,0	1/1:4,6:9:11.71:72,12,0
chr10	46689007	.	GA	G	10516.36	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-4.726;DP=521;FS=17.852;HRun=9;HaplotypeScore=95.4104;InbreedingCoeff=0.9165;MQ=73.02;MQ0=3;MQRankSum=-4.865;QD=21.86;ReadPosRankSum=4.523;VQSLOD=3.7730;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,39:45:87.27:1112,87,0	1/1:0,5:5:12.04:156,12,0	0/0:23,0:13:35.80:0,36,429	0/0:17,0:13:22.11:0,22,267	1/1:21,0:21:47.30:321,47,0	1/1:0,9:9:18.06:234,18,0	1/1:4,19:23:32.96:427,33,0	1/1:23,1:24:58.15:570,58,0	1/1:1,9:10:18.06:233,18,0	1/1:25,2:26:67.42:576,67,0	1/1:11,1:12:20.38:196,20,0	1/1:0,20:20:39.13:505,39,0	1/1:1,16:17:30.10:389,30,0	1/1:14,0:14:23.08:230,23,0	1/1:0,24:24:51.17:661,51,0	1/1:13,1:14:39.11:302,39,0	1/1:29,0:29:59.58:336,60,0	1/1:9,0:9:5.72:58,6,0	1/1:1,19:20:57.18:727,57,0	1/1:1,14:15:33.11:422,33,0	1/1:0,23:23:42.12:531,42,0	1/1:1,16:17:36.10:459,36,0	1/1:0,10:10:24.08:311,24,0	1/1:1,12:13:23.85:297,24,0	1/1:19,0:19:48.90:372,49,0	1/1:20,1:21:37.20:329,37,0	1/1:4,23:27:45.10:583,45,0	1/1:13,0:13:30.81:180,31,0
chr10	46689380	.	C	CTTTT	5446.29	PASS	AB=1.000;AC=52;AF=0.929;AN=56;BaseQRankSum=-1.129;DP=497;FS=0.000;HRun=19;HaplotypeScore=107.5546;InbreedingCoeff=0.3048;MQ=60.74;MQ0=9;MQRankSum=-2.947;QD=12.02;ReadPosRankSum=-1.523;VQSLOD=0.1382;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:22:16.63:232,17,0	1/1:5,0:5:4.57:56,5,0	0/0:43,0:15:5.91:0,6,42	0/1:26,0:14:21.50:37,0,21	1/1:22,6:29:30.02:465,30,0	1/1:14,0:13:12.04:210,12,0	1/1:9,0:8:12.46:161,12,0	1/1:29,0:28:12.55:102,13,0	1/1:12,0:12:12.04:187,12,0	1/1:22,5:27:25.59:358,26,0	1/1:12,1:16:12.04:208,12,0	1/1:11,0:10:6.02:104,6,0	1/1:11,0:11:11.98:161,12,0	1/1:10,2:12:9.03:162,9,0	0/1:7,0:7:0:1,0,0	1/1:15,7:22:19.88:340,20,0	1/1:14,0:23:8.69:159,9,0	1/1:9,5:15:10.21:126,10,0	1/1:24,0:24:23.12:309,23,0	1/1:16,0:22:18.06:317,18,0	1/1:6,0:6:10.58:144,11,0	1/1:5,0:4:3.01:50,3,0	1/1:16,0:16:27.14:402,27,0	1/1:11,0:10:3.01:51,3,0	1/1:21,0:21:15.05:226,15,0	1/1:12,0:20:29.98:399,30,0	1/1:18,0:22:18.06:311,18,0	1/1:6,3:9:9.03:169,9,0
chr10	46690471	.	G	GA	6413.60	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-13.112;DP=663;FS=0.000;HRun=9;HaplotypeScore=61.5283;InbreedingCoeff=0.9768;MQ=78.68;MQ0=0;MQRankSum=0.507;QD=26.39;ReadPosRankSum=-0.606;VQSLOD=4.8968;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,117,1009	0/0:14,0:14:17.27:0,17,291	0/0:20,0:19:39.24:0,39,355	0/0:15,0:15:26.95:0,27,227	1/1:3,23:26:65.93:696,66,0	0/0:25,0:25:71.98:0,72,625	0/0:18,0:18:50.99:0,51,443	1/1:5,17:23:27.92:519,28,0	0/0:29,1:30:56.80:0,57,722	1/1:1,22:23:64.73:700,65,0	1/1:2,18:20:44.99:497,45,0	0/0:24,0:24:65.97:0,66,569	0/0:23,0:23:56.94:0,57,489	1/1:8,18:27:27.13:556,27,0	0/0:31,0:31:89.96:0,90,778	1/1:2,26:29:78.04:844,78,0	1/1:2,23:25:60.16:664,60,0	1/1:1,12:13:33.08:359,33,0	0/0:21,0:21:47.94:0,48,410	0/0:26,0:26:62.96:0,63,543	0/0:31,0:31:68.90:0,69,588	0/0:18,0:18:41.97:0,42,364	0/0:23,0:23:47.94:0,48,409	0/0:25,0:25:45.95:0,46,546	1/1:4,11:15:4.03:272,4,0	1/1:1,27:28:78.17:842,78,0	0/0:32,2:34:50.80:0,51,669	1/1:0,14:14:42.11:465,42,0
chr10	46691027	.	G	GA	14650.89	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-7.200;DP=546;FS=2.681;HRun=7;HaplotypeScore=50.8197;InbreedingCoeff=0.9125;MQ=79.18;MQ0=0;MQRankSum=-8.448;QD=28.73;ReadPosRankSum=4.962;VQSLOD=5.1525;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,15:18:39.05:451,39,0	1/1:1,11:12:21.06:253,21,0	0/0:20,1:21:11.97:0,12,359	0/0:15,0:15:5.30:0,5,246	1/1:3,18:21:47.97:524,48,0	1/1:1,27:29:66.20:794,66,0	1/1:3,17:20:42.13:506,42,0	1/1:5,26:31:81.19:920,81,0	1/1:3,20:23:51.15:606,51,0	1/1:4,19:23:57.17:676,57,0	1/1:1,15:16:45.14:542,45,0	1/1:1,18:19:48.15:577,48,0	1/1:1,13:14:33.10:397,33,0	1/1:2,17:19:51.16:613,51,0	1/1:3,10:13:27.08:325,27,0	1/1:2,20:22:51.16:614,51,0	1/1:2,18:20:51.16:614,51,0	1/1:1,22:23:51.14:600,51,0	1/1:3,17:21:54.15:631,54,0	1/1:1,17:18:48.03:530,48,0	1/1:2,8:10:24.07:289,24,0	1/1:2,20:22:51.11:598,51,0	1/1:1,13:14:36.11:433,36,0	1/1:2,12:14:36.11:433,36,0	1/1:0,26:26:63.19:758,63,0	1/1:1,22:23:69.20:815,69,0	1/1:4,25:29:69.21:829,69,0	1/1:0,10:10:27.08:325,27,0
chr10	46692760	.	TACTC	T	14015.59	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=17.040;DP=693;FS=3.763;HRun=0;HaplotypeScore=122.5283;InbreedingCoeff=0.9999;MQ=87.22;MQ0=0;MQRankSum=-6.383;QD=50.06;ReadPosRankSum=1.269;VQSLOD=6.0070;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,117,3072	0/0:11,0:11:33.11:0,33,904	0/0:39,0:39:81.34:0,81,2318	0/0:35,0:33:70.21:0,70,1748	1/1:0,28:28:78.26:1385,78,0	0/0:26,0:26:72.25:0,72,1905	0/0:19,0:19:55.07:0,55,1424	1/1:0,33:33:99:1707,99,0	0/0:20,0:20:60.21:0,60,1593	1/1:0,31:31:90.30:1676,90,0	1/1:0,25:25:69.24:1298,69,0	0/0:20,0:20:60.21:0,60,1611	0/0:18,0:18:51.18:0,51,1380	1/1:0,19:19:48.16:930,48,0	0/0:29,0:29:87.28:0,87,2235	1/1:1,25:26:66.23:1246,66,0	1/1:0,28:28:72.25:1395,72,0	1/1:1,16:17:36.12:694,36,0	0/0:18,0:18:54.19:0,54,1450	0/0:29,0:29:87.28:0,87,2281	0/0:17,0:17:51.16:0,51,1211	0/0:28,0:28:78.25:0,78,1928	0/0:18,0:18:54.19:0,54,1433	0/0:14,0:14:39.13:0,39,1057	1/1:0,20:20:45.15:872,45,0	1/1:1,35:36:99:1973,105,0	0/0:31,0:30:93.32:0,93,2497	1/1:2,15:17:45.15:839,45,0
chr10	46693269	.	AGAACCC	A	1999.26	PASS	AB=0.974;AC=19;AF=0.339;AN=56;BaseQRankSum=7.342;DP=443;FS=49.395;HRun=0;HaplotypeScore=88.0043;InbreedingCoeff=-0.5115;MQ=42.16;MQ0=30;MQRankSum=-3.355;QD=6.71;ReadPosRankSum=-1.513;VQSLOD=-0.3998;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:20,0:18:99:146,0,531	0/0:9,0:9:20.67:0,21,379	0/0:12,0:1:3.01:0,3,42	0/0:12,0:3:5.37:0,5,51	0/0:17,0:17:43.39:0,43,923	0/1:21,0:20:14.15:14,0,1378	0/1:8,0:7:13.19:13,0,220	0/1:14,8:20:99:351,0,734	0/1:11,0:11:2.30:2,0,632	0/1:12,0:10:7.11:7,0,512	0/1:16,0:15:15.74:16,0,912	0/1:12,0:11:99:123,0,413	0/1:13,0:13:36.41:36,0,470	0/1:12,0:11:10.34:10,0,613	0/0:19,0:19:9.07:0,9,720	0/1:17,0:17:30.01:30,0,985	0/1:15,0:13:99:166,0,345	0/1:16,0:15:32.73:33,0,724	0/0:16,0:15:39.67:0,40,957	0/0:17,0:17:43.50:0,44,808	0/0:19,0:17:29.25:0,29,772	0/1:12,0:12:99:99,0,496	0/1:19,0:18:99:209,0,724	0/1:5,0:5:74.44:74,0,87	0/1:24,0:23:99:116,0,1064	0/1:14,6:19:99:428,0,809	0/0:22,0:19:47.63:0,48,986	0/1:23,0:20:99:279,0,553
chr10	46694628	.	AAC	A	1898.46	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.254;DP=764;FS=0.000;HRun=0;HaplotypeScore=87.4402;InbreedingCoeff=0.9979;MQ=76.49;MQ0=2;MQRankSum=-2.633;QD=31.12;ReadPosRankSum=1.589;VQSLOD=5.5903;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:90.31:0,90,1590	1/1:0,20:20:51.17:701,51,0	0/0:19,0:19:54.11:0,54,873	0/0:18,0:18:44.83:0,45,765	0/0:34,0:34:99:0,99,1698	0/0:26,0:26:72.25:0,72,1277	0/0:18,0:18:54.17:0,54,917	0/0:35,0:35:96.33:0,96,1704	0/0:23,0:23:69.24:0,69,1211	0/0:36,0:36:99:0,102,1779	0/0:30,0:30:90.31:0,90,1590	0/0:30,0:30:84.26:0,84,1427	0/0:37,0:37:99:0,102,1800	0/0:30,0:30:81.26:0,81,1399	1/1:1,40:39:96.32:1319,96,0	0/0:45,0:45:99:0,123,2173	0/0:16,0:16:48.14:0,48,820	0/0:9,0:9:21.07:0,21,372	0/0:22,0:22:63.22:0,63,1112	0/0:34,0:34:99:0,99,1720	0/0:19,0:19:54.19:0,54,957	0/0:32,0:32:93.32:0,93,1639	0/0:24,0:24:69.22:0,69,1192	0/0:22,0:22:60.21:0,60,1064	0/0:37,0:37:99:0,111,1938	0/0:36,0:36:93.30:0,93,1588	0/0:19,0:19:54.14:0,54,896	0/0:20,0:20:60.21:0,60,1064
chr10	46695200	.	CAATAATAATAAT	C	728.95	PASS	AB=0.882;AC=9;AF=0.205;AN=44;BaseQRankSum=1.345;DP=255;FS=3.129;HRun=0;HaplotypeScore=93.6824;InbreedingCoeff=0.5149;MQ=61.51;MQ0=2;MQRankSum=-2.236;QD=15.51;ReadPosRankSum=1.314;VQSLOD=2.0727;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:13,2:15:29.61:97,0,30	0/0:3,0:3:3.01:0,3,174	./.	./.	0/0:10,0:11:9.03:0,9,360	0/0:12,0:12:21.07:0,21,1181	./.	0/0:37,0:31:21.07:0,21,789	1/1:7,3:11:6.02:207,6,0	0/0:9,0:9:9.03:0,9,473	0/0:9,0:9:9.03:0,9,391	1/1:2,5:7:9.03:310,9,0	1/1:3,3:6:6.02:207,6,0	0/0:4,0:6:9.03:0,9,447	0/0:7,0:10:12.04:0,12,495	0/0:5,0:5:6.02:0,6,315	0/0:15,0:18:19.84:0,20,804	0/0:9,0:9:12.04:0,12,540	0/0:12,0:11:6.02:0,6,347	0/0:5,0:5:3.01:0,3,133	./.	./.	1/1:6,2:8:2.71:37,3,0	./.	0/0:7,0:11:21.07:0,21,932	0/0:10,0:11:6.02:0,6,330	0/0:9,0:13:21.06:0,21,983	0/0:1,0:5:15.05:0,15,735
chr10	46696151	.	CCTT	C	970.51	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=4.232;DP=554;FS=0.000;HRun=0;HaplotypeScore=91.1773;InbreedingCoeff=0.9942;MQ=85.72;MQ0=0;MQRankSum=-2.950;QD=38.82;ReadPosRankSum=2.193;VQSLOD=4.5125;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,99,2231	1/1:0,6:6:18.06:306,18,0	0/0:27,0:25:69.16:0,69,1375	0/0:43,0:37:99:0,102,1818	0/0:23,0:23:69.22:0,69,1490	0/0:24,0:24:63.20:0,63,1349	0/0:23,0:23:66.20:0,66,1359	0/0:27,0:27:75.26:0,75,1685	0/0:22,0:22:66.18:0,66,1357	0/0:20,0:20:60.21:0,60,1382	0/0:16,0:16:48.14:0,48,1018	0/0:14,0:14:33.10:0,33,709	0/0:20,0:20:51.17:0,51,1149	0/0:14,0:14:39.13:0,39,854	1/1:0,19:19:48.12:784,48,0	0/0:10,0:10:30.08:0,30,645	0/0:18,0:18:54.19:0,54,1215	0/0:18,0:18:54.18:0,54,1208	0/0:19,0:19:51.13:0,51,978	0/0:14,0:14:42.12:0,42,872	0/0:25,0:25:72.23:0,72,1586	0/0:8,0:8:24.07:0,24,500	0/0:14,0:14:39.13:0,39,844	0/0:31,0:31:81.28:0,81,1855	0/0:15,0:15:45.15:0,45,991	0/0:13,0:13:39.12:0,39,854	0/0:22,0:22:63.22:0,63,1395	0/0:15,0:15:39.13:0,39,865
chr10	46696230	.	G	GT	5051.49	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-4.987;DP=375;FS=15.089;HRun=5;HaplotypeScore=57.7093;InbreedingCoeff=0.9286;MQ=67.10;MQ0=4;MQRankSum=-2.038;QD=28.38;ReadPosRankSum=1.356;VQSLOD=3.5921;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,15:17:44.88:556,45,0	1/1:2,2:3:9.02:107,9,0	0/0:29,0:18:10.11:0,10,235	0/0:31,0:16:4.47:0,4,192	0/0:19,0:19:37.82:0,38,370	1/1:1,15:16:33.11:434,33,0	1/1:1,4:5:12.04:152,12,0	0/0:24,0:24:66.10:0,66,694	1/1:3,6:9:20.55:246,21,0	0/0:16,0:16:44.95:0,45,470	0/0:4,0:4:8.39:0,8,71	1/1:1,19:20:45.15:592,45,0	1/1:3,7:9:24.96:317,25,0	0/0:7,0:7:15.04:0,15,161	1/1:1,5:6:15.05:193,15,0	0/0:7,0:7:14.92:0,15,158	0/0:9,0:10:17.10:0,17,212	0/0:11,0:11:21.05:0,21,225	1/1:6,16:22:49.39:616,49,0	1/1:7,12:18:47.64:598,48,0	1/1:0,5:5:12.04:158,12,0	1/1:0,3:3:9.03:118,9,0	1/1:2,9:11:21.07:269,21,0	1/1:4,11:15:27.09:355,27,0	0/0:14,0:13:34.71:0,35,338	0/0:16,0:15:28.34:0,28,376	1/1:6,10:15:30.03:340,30,0	0/0:5,0:5:15.04:0,15,161
chr10	46696372	.	AT	A	2327.71	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=8.905;DP=378;FS=2.819;HRun=8;HaplotypeScore=43.6673;InbreedingCoeff=0.8933;MQ=65.31;MQ0=4;MQRankSum=1.716;QD=21.55;ReadPosRankSum=2.787;VQSLOD=3.6517;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,28:28:69.11:666,69,0	0/0:10,0:10:30.05:0,30,336	0/0:19,0:8:8.99:0,9,82	0/0:27,0:10:5.10:0,5,125	0/0:29,0:29:72.16:0,72,831	0/0:19,0:19:57.17:0,57,687	0/0:4,0:4:12.04:0,12,145	0/0:21,0:20:54.12:0,54,635	1/1:1,5:6:12.02:116,12,0	0/0:18,0:18:45.14:0,45,542	0/0:13,0:13:33.07:0,33,374	1/1:0,13:13:39.06:377,39,0	1/1:1,5:6:12.02:116,12,0	0/0:6,0:6:18.01:0,18,201	0/0:8,0:8:21.04:0,21,230	0/0:9,0:9:27.08:0,27,326	0/0:16,0:16:44.99:0,45,506	0/0:23,0:23:63.02:0,63,737	1/1:2,12:13:39.03:368,39,0	1/1:2,10:12:30.05:289,30,0	1/1:0,4:4:9.01:87,9,0	1/1:0,1:1:3:29,3,0	1/1:1,4:5:2.60:29,3,0	1/1:1,4:5:12.02:116,12,0	0/0:17,0:17:48.12:0,48,558	0/0:13,0:13:36.10:0,36,424	1/1:0,14:14:35.95:347,36,0	0/0:17,0:17:39.08:0,39,445
chr10	46696562	.	C	CTGTT	7410.51	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-12.791;DP=608;FS=1.815;HRun=0;HaplotypeScore=88.2358;InbreedingCoeff=0.9871;MQ=59.54;MQ0=1;MQRankSum=2.683;QD=46.90;ReadPosRankSum=2.900;VQSLOD=5.1029;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,19:34:48.01:1067,48,0	0/0:6,0:6:15.04:0,15,228	0/0:18,0:14:15.05:0,15,252	0/0:10,0:9:18.05:0,18,261	0/0:19,0:19:57.16:0,57,875	0/0:22,0:22:54.17:0,54,880	0/0:16,0:16:36.09:0,36,530	0/0:33,0:33:51.14:0,51,762	1/1:6,18:25:54.14:1271,54,0	0/0:21,0:21:45.15:0,45,755	0/0:22,0:22:63.22:0,63,1048	1/1:2,17:20:51.18:1254,51,0	1/1:7,12:19:42.14:1022,42,0	0/0:17,0:17:42.14:0,42,702	0/0:21,0:21:54.16:0,54,857	0/0:24,0:24:63.22:0,63,1051	0/0:32,0:32:81.26:0,81,1322	0/0:26,0:26:40.08:0,40,895	0/0:25,0:24:48.15:0,48,741	0/0:16,0:16:48.13:0,48,731	0/0:22,0:22:42.13:0,42,655	1/1:1,12:13:35.95:732,36,0	1/1:5,4:9:12.04:295,12,0	1/1:6,31:38:72.25:1770,72,0	0/0:14,0:14:39.12:0,39,627	0/0:20,0:20:45.11:0,45,725	0/0:26,0:26:57.19:0,57,952	0/0:40,0:40:99:0,105,1762
chr10	46699554	.	ACCCTTCAGGT	A	19659.02	PASS	AB=0.964;AC=23;AF=0.411;AN=56;BaseQRankSum=18.712;DP=728;FS=0.632;HRun=0;HaplotypeScore=233.0767;InbreedingCoeff=0.9265;MQ=89.78;MQ0=0;MQRankSum=-19.401;QD=65.75;ReadPosRankSum=3.062;VQSLOD=4.7241;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,33:36:84.29:2771,84,0	0/0:14,0:14:42.14:0,42,2108	0/0:26,0:26:75.20:0,75,3258	0/0:40,0:40:99:0,111,4461	0/0:34,0:34:96.32:0,96,4800	0/0:20,0:20:57.20:0,57,3042	0/0:29,0:29:84.29:0,84,4256	0/0:27,0:27:78.26:0,78,3513	1/1:0,27:27:78.27:2600,78,0	0/0:27,0:27:81.28:0,81,4142	0/0:20,0:20:60.21:0,60,2913	1/1:0,23:23:57.20:1901,57,0	1/1:5,22:27:63.22:2098,63,0	0/0:36,0:36:99:0,108,5592	0/0:31,0:31:93.32:0,93,4843	0/1:26,1:27:18.77:19,0,3907	0/0:30,0:30:87.30:0,87,4629	0/0:26,0:26:75.26:0,75,3809	1/1:5,15:20:45.12:1350,45,0	1/1:1,24:25:63.22:2013,63,0	1/1:5,19:24:33.07:992,33,0	1/1:1,19:20:48.12:1516,48,0	1/1:3,14:17:39.13:1300,39,0	1/1:7,18:25:21.07:698,21,0	0/0:25,0:25:69.24:0,69,3644	0/0:26,0:26:75.25:0,75,3809	1/1:2,26:28:72.03:2400,72,0	0/0:18,0:18:54.19:0,54,2824
chr10	46700032	.	T	TTTTG	4441.19	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-11.372;DP=609;FS=4.163;HRun=0;HaplotypeScore=116.2205;InbreedingCoeff=0.9690;MQ=62.39;MQ0=4;MQRankSum=1.853;QD=32.18;ReadPosRankSum=1.506;VQSLOD=4.8447;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,20:27:36.12:868,36,0	0/0:5,0:5:12.03:0,12,170	0/0:26,0:20:8.54:0,9,145	0/0:25,0:23:27.09:0,27,428	0/0:26,0:26:63.11:0,63,932	0/0:23,0:23:42.04:0,42,604	0/0:25,0:25:54.18:0,54,870	0/0:37,0:37:51.16:0,51,768	1/1:8,11:19:30.10:723,30,0	0/0:21,0:21:33.06:0,33,476	0/0:12,0:12:27.02:0,27,380	1/1:8,5:13:9.03:217,9,0	1/1:5,10:16:24.08:577,24,0	0/0:18,0:18:33.08:0,33,504	0/0:38,0:37:48.15:0,48,744	0/0:19,0:20:24.07:0,24,366	0/0:25,0:25:60.16:0,60,908	0/0:23,0:23:51.12:0,51,769	0/0:24,0:23:27.09:0,27,417	0/0:19,0:19:30.10:0,30,483	0/0:17,0:17:42.14:0,42,666	1/1:4,7:12:21.07:506,21,0	1/1:7,9:17:23.57:538,24,0	1/1:12,21:33:42.14:1012,42,0	0/0:18,0:17:41.69:0,42,610	0/0:22,0:22:33.11:0,33,529	0/0:35,0:35:58.04:0,58,892	0/0:11,0:10:23.95:0,24,354
chr10	46700178	.	T	TTTG	1137.01	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=-2.964;DP=483;FS=2.985;HRun=0;HaplotypeScore=118.1066;InbreedingCoeff=0.2092;MQ=46.83;MQ0=27;MQRankSum=0.542;QD=4.12;ReadPosRankSum=0.880;VQSLOD=2.4511;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:26,4:29:22.62:373,23,0	0/0:8,0:8:9.01:0,9,82	0/0:34,0:5:5.07:0,5,52	0/1:30,0:5:11.74:12,0,26	0/1:23,0:23:0.97:1,0,122	0/1:16,0:14:0.67:1,0,97	0/0:14,0:13:3.93:0,4,180	0/0:27,0:26:39.86:0,40,347	1/1:10,0:8:5.96:57,6,0	0/1:23,0:22:6.79:7,0,192	0/1:10,0:10:19.37:19,0,28	1/1:4,0:4:8.46:61,8,0	0/1:7,0:6:2.90:79,0,3	0/1:10,0:10:6.36:6,0,28	0/0:20,0:17:14.66:0,15,166	0/0:12,0:11:16.49:0,16,106	0/0:29,0:26:0.95:0,1,189	0/0:15,0:13:0.04:0,0,67	1/1:15,0:12:18.27:159,18,0	0/1:15,0:15:19.57:87,0,20	0/1:22,0:19:2.76:3,0,41	1/1:10,0:9:8.52:116,9,0	1/1:12,0:11:14.53:118,15,0	0/1:14,0:11:0.02:0,0,0	0/0:21,0:20:29.70:0,30,249	0/0:20,0:17:5.92:0,6,132	0/1:25,0:24:55.70:203,0,56	0/0:7,0:6:10.07:0,10,61
chr10	46700180	.	T	TG	854.46	PASS	AB=0.878;AC=13;AF=0.232;AN=56;BaseQRankSum=-5.231;DP=475;FS=48.757;HRun=0;HaplotypeScore=70.3352;InbreedingCoeff=0.2552;MQ=42.93;MQ0=32;MQRankSum=4.970;QD=5.77;ReadPosRankSum=3.181;VQSLOD=1.5574;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:28,1:28:20.76:174,0,21	0/0:7,0:7:9.01:0,9,83	0/0:33,0:4:5.10:0,5,52	0/0:29,0:4:2.17:0,2,31	0/0:23,0:23:43.57:0,44,246	0/0:17,0:15:23.81:0,24,176	0/0:13,0:11:26.88:0,27,215	0/0:27,0:25:62.52:0,63,434	1/1:9,0:7:1.93:21,2,0	0/0:23,0:22:56.20:0,56,420	0/0:9,0:9:26.52:0,27,171	0/1:4,0:4:7.18:7,0,46	0/1:7,0:6:29.11:30,0,29	0/0:10,0:10:17.75:0,18,103	0/0:20,0:17:38.03:0,38,253	0/0:11,0:10:23.11:0,23,154	0/0:28,0:25:54.45:0,54,319	0/0:16,0:13:22.01:0,22,148	1/1:7,8:11:22.04:212,22,0	0/1:5,10:15:10.85:120,0,11	0/1:11,10:18:19.40:19,0,46	1/1:9,0:8:7.94:107,8,0	0/1:12,0:11:14.11:52,0,14	0/0:12,1:10:1.40:0,1,5	0/0:21,0:19:45.82:0,46,325	0/0:20,0:16:36.89:0,37,249	0/1:24,3:26:0.76:267,0,1	0/0:7,0:6:12.45:0,12,67
chr10	46700186	.	T	TTTTG	197.13	PASS	AB=0.984;AC=10;AF=0.179;AN=56;BaseQRankSum=-0.951;DP=451;FS=32.588;HRun=0;HaplotypeScore=83.5555;InbreedingCoeff=-0.0453;MQ=38.96;MQ0=37;MQRankSum=-2.800;QD=1.45;ReadPosRankSum=1.001;VQSLOD=-0.0755;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:26:19.33:0,19,215	0/0:1,5:6:3:0,3,27	0/0:35,0:4:8.44:0,8,55	0/1:28,0:3:0.27:0,0,0	0/0:21,0:21:1.32:0,1,106	0/1:14,0:12:10.97:11,0,38	0/0:12,0:10:21.80:0,22,156	0/0:23,0:21:17.72:0,18,254	1/1:10,0:6:2.04:6,2,0	0/0:20,0:19:30.24:0,30,265	0/0:10,0:10:7.09:0,7,79	0/1:5,0:5:2.88:3,0,49	0/0:6,0:5:7.91:0,8,40	0/1:9,0:9:19.57:20,0,42	0/1:18,3:18:16.87:244,0,17	0/0:11,0:10:0.27:0,0,87	0/0:26,0:23:4.60:0,5,155	0/1:16,0:13:12.18:12,0,127	0/0:11,0:7:20.65:0,21,195	0/0:12,0:12:32.63:0,33,225	0/0:17,0:14:17.90:0,18,172	0/0:7,0:6:11.67:0,12,70	0/1:14,0:13:12.46:12,0,78	0/0:14,0:10:5.53:0,6,37	0/0:21,0:18:32.17:0,32,172	0/1:19,0:15:7.59:8,0,111	0/0:25,0:24:61.50:0,61,579	0/0:9,0:7:17.44:0,17,111
chr10	46701230	.	ATT	A	6890.81	PASS	AB=0.581;AC=31;AF=0.554;AN=56;BaseQRankSum=-14.433;DP=618;FS=2.059;HRun=12;HaplotypeScore=91.1602;InbreedingCoeff=0.9183;MQ=69.39;MQ0=7;MQRankSum=-0.351;QD=19.09;ReadPosRankSum=3.297;VQSLOD=4.4648;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,31:38:72.12:732,72,0	1/1:0,11:11:27.06:275,27,0	0/0:25,0:15:17.95:0,18,178	0/0:15,0:9:11.68:0,12,61	0/0:8,0:31:58.41:0,58,223	1/1:2,24:26:66.14:671,66,0	1/1:5,19:23:13.30:450,13,0	0/0:15,0:28:49.87:0,50,280	1/1:5,14:19:20.99:214,21,0	0/1:7,2:25:17.10:17,0,103	0/0:3,1:19:41.72:0,42,189	1/1:5,16:22:44.81:436,45,0	1/1:2,17:19:39.08:397,39,0	0/0:5,0:16:28.08:0,28,128	1/1:1,25:26:60.13:611,60,0	0/0:2,0:22:50.88:0,51,203	0/0:7,0:34:60.09:0,60,214	0/0:0,0:16:37.33:0,37,133	1/1:5,12:17:26.18:252,26,0	1/1:4,17:20:42.05:427,42,0	1/1:4,24:28:57.09:580,57,0	1/1:4,12:15:36.05:366,36,0	1/1:0,14:14:33.07:335,33,0	1/1:4,23:26:63.13:641,63,0	0/0:0,1:19:32.44:0,32,114	0/0:2,0:16:28.84:0,29,103	1/1:5,23:28:48.07:487,48,0	0/0:2,0:12:20.48:0,20,95
chr10	46701642	.	C	CTT	11841.17	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-16.246;DP=575;FS=2.312;HRun=4;HaplotypeScore=68.1934;InbreedingCoeff=0.9993;MQ=89.80;MQ0=0;MQRankSum=-6.548;QD=49.54;ReadPosRankSum=2.475;VQSLOD=3.7711;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:75.23:0,75,985	0/0:7,0:7:21.03:0,21,247	0/0:24,0:24:56.16:0,56,681	0/0:26,0:25:41.96:0,42,716	1/1:1,26:27:75.26:1351,75,0	0/0:15,0:15:45.11:0,45,581	0/0:21,0:21:57.17:0,57,744	1/1:1,29:30:87.26:1529,87,0	0/0:15,0:15:39.13:0,39,520	1/1:0,22:22:66.23:1189,66,0	1/1:2,21:24:66.23:1180,66,0	0/0:18,0:18:45.15:0,45,600	0/0:23,0:23:66.18:0,66,849	1/1:1,17:18:48.16:865,48,0	0/0:34,0:34:96.30:0,96,1266	1/1:0,13:13:36.12:649,36,0	1/1:0,19:19:48.16:865,48,0	1/1:0,17:17:45.08:811,45,0	0/0:22,0:22:60.17:0,60,773	0/0:27,0:27:75.23:0,75,984	0/0:12,0:12:30.10:0,30,400	0/0:16,0:16:48.16:0,48,640	0/0:20,0:20:54.17:0,54,720	0/0:13,0:13:39.13:0,39,520	1/1:0,16:16:39.13:702,39,0	1/1:2,31:33:93.32:1675,93,0	0/0:18,0:18:51.17:0,51,680	1/1:0,20:20:57.20:1027,57,0
chr10	46702608	.	GA	G	15604.07	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-3.835;DP=646;FS=5.436;HRun=7;HaplotypeScore=64.8403;InbreedingCoeff=0.9979;MQ=65.90;MQ0=0;MQRankSum=-5.802;QD=25.58;ReadPosRankSum=5.693;VQSLOD=5.2352;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:1,34:35:90.21:918,90,0	1/1:1,18:19:45.10:459,45,0	0/0:20,0:16:33.23:0,33,487	0/0:16,0:13:27.47:0,27,291	1/1:1,27:28:78.17:793,78,0	1/1:1,21:22:60.14:612,60,0	1/1:1,9:10:24.05:245,24,0	1/1:1,32:33:93.20:947,93,0	1/1:3,18:21:48.10:490,48,0	1/1:2,23:25:69.15:703,69,0	1/1:2,15:17:42.09:429,42,0	1/1:0,22:22:48.11:490,48,0	1/1:0,21:21:48.11:490,48,0	1/1:2,17:19:39.09:398,39,0	1/1:4,28:32:78.17:796,78,0	1/1:2,16:18:36.08:367,36,0	1/1:6,39:45:99:1059,105,0	1/1:4,14:18:33.07:337,33,0	1/1:2,22:24:66.11:659,66,0	1/1:1,21:22:63.14:640,63,0	1/1:2,21:23:51.12:520,51,0	1/1:1,13:14:36.08:367,36,0	1/1:0,22:22:60.13:611,60,0	1/1:2,18:20:48.11:490,48,0	1/1:1,21:22:54.12:551,54,0	1/1:2,28:30:84.19:857,84,0	1/1:1,35:36:99:1010,99,0	1/1:0,12:12:36.08:367,36,0
chr10	46704276	.	T	TA	5737.53	PASS	AB=0.656;AC=36;AF=0.643;AN=56;BaseQRankSum=-12.403;DP=457;FS=12.380;HRun=11;HaplotypeScore=59.1938;InbreedingCoeff=0.7555;MQ=73.55;MQ0=4;MQRankSum=0.203;QD=17.87;ReadPosRankSum=-1.081;VQSLOD=4.5921;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:24:50.27:0,50,394	1/1:3,5:8:18.03:177,18,0	0/0:16,0:13:10.39:0,10,93	0/0:14,0:13:10.27:0,10,62	1/1:3,14:18:32.82:297,33,0	1/1:2,16:19:44.92:441,45,0	1/1:4,11:14:9.58:249,10,0	1/1:8,9:15:21.04:213,21,0	0/0:11,0:12:34.90:0,35,259	1/1:3,9:12:24.05:244,24,0	1/1:4,10:13:24.01:233,24,0	0/0:7,0:7:20.43:0,20,148	0/0:13,0:13:32.47:0,32,242	1/1:3,17:20:51.09:517,51,0	1/1:3,8:12:6.66:235,7,0	1/1:1,15:17:44.92:441,45,0	1/1:2,14:17:38.91:380,39,0	1/1:3,18:20:24.73:418,25,0	0/1:4,11:15:15.92:197,0,16	1/1:4,23:27:1.56:369,2,0	1/1:1,7:7:9.02:91,9,0	0/0:20,0:20:44.80:0,45,348	0/0:16,0:16:47.51:0,48,359	0/0:11,0:11:26.89:0,27,209	1/1:3,10:13:6.82:251,7,0	1/1:8,17:25:27.83:454,28,0	1/1:4,16:20:1.58:369,2,0	0/1:13,7:20:2.19:162,0,2
chr10	46705434	.	T	TGG	1128.53	PASS	AB=0.848;AC=14;AF=0.250;AN=56;BaseQRankSum=5.076;DP=400;FS=2.239;HRun=0;HaplotypeScore=50.9083;InbreedingCoeff=0.2748;MQ=33.88;MQ0=98;MQRankSum=-1.644;QD=8.00;ReadPosRankSum=2.710;VQSLOD=3.1595;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:13:31.07:0,31,321	0/1:3,4:6:54.35:111,0,54	0/0:21,0:8:10.39:0,10,112	0/0:28,0:5:4.69:0,5,50	0/0:9,0:6:14.90:0,15,141	0/1:12,5:13:78.23:78,0,96	1/1:11,10:18:23.52:282,24,0	0/0:12,0:10:23.89:0,24,230	1/1:4,0:2:3.01:40,3,0	0/0:12,0:8:23.66:0,24,266	0/0:12,0:11:23.82:0,24,230	0/1:7,0:5:22.17:22,0,93	1/1:11,0:6:6.02:74,6,0	0/0:13,0:9:17.97:0,18,196	0/1:16,6:16:99:115,0,270	0/0:7,0:5:8.94:0,9,90	0/0:31,0:23:66.63:0,67,691	0/0:17,0:13:39.12:0,39,480	0/1:14,1:11:1.77:183,0,2	0/0:6,10:13:4.07:0,4,12	1/1:13,0:8:8.97:78,9,0	0/0:4,1:3:3:0,3,27	0/0:6,2:4:6.02:0,6,74	0/0:12,0:4:3.01:0,3,35	0/0:12,0:10:20.98:0,21,231	0/0:17,0:13:30.82:0,31,313	0/1:22,1:20:99:306,0,147	0/0:9,0:2:3.01:0,3,38
chr10	46705437	.	T	TGGTTC	1962	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=0.793;DP=396;FS=0.604;HRun=0;HaplotypeScore=61.1112;InbreedingCoeff=0.0003;MQ=32.19;MQ0=96;MQRankSum=-2.181;QD=10.96;ReadPosRankSum=1.195;VQSLOD=1.7958;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:18,0:13:14.23:14,0,279	0/1:7,0:6:41.75:170,0,42	0/0:15,0:7:9.77:0,10,111	0/0:22,0:3:2.98:0,3,22	0/0:9,0:6:11.21:0,11,121	0/1:15,0:11:24.77:129,0,25	0/1:22,0:18:10.68:475,0,11	0/0:12,0:10:22.32:0,22,347	1/1:7,0:5:5.80:82,6,0	0/0:12,0:8:24.08:0,24,418	0/0:12,0:11:24.08:0,24,385	0/1:7,0:5:39.34:39,0,107	1/1:10,1:6:6.02:107,6,0	0/0:13,0:9:18.07:0,18,261	0/1:24,0:18:99:239,0,172	0/0:7,0:5:9.03:0,9,144	0/0:31,0:23:62.74:0,63,1007	0/0:16,0:13:29.11:0,29,620	0/1:16,0:12:25.19:293,0,25	0/0:16,0:13:5.38:0,5,53	1/1:8,7:11:0.71:96,1,0	0/0:5,0:3:2.88:0,3,15	0/0:8,0:4:6.02:0,6,108	0/1:12,0:4:10.76:11,0,17	0/0:13,0:11:22.88:0,23,340	0/0:17,0:13:35.98:0,36,506	0/1:23,0:20:99:459,0,206	0/0:9,0:1:3.01:0,3,58
chr10	46705808	.	C	CTGTG	1161.48	PASS	AB=0.931;AC=19;AF=0.339;AN=56;BaseQRankSum=5.743;DP=679;FS=44.009;HRun=0;HaplotypeScore=171.4178;InbreedingCoeff=0.3173;MQ=56.80;MQ0=27;MQRankSum=1.716;QD=3.53;ReadPosRankSum=-3.918;VQSLOD=-0.4799;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:31,0:30:62.56:63,0,151	0/1:8,0:11:3.27:18,0,3	0/0:31,0:8:5.08:0,5,63	0/0:56,0:22:38.08:0,38,560	0/0:21,0:19:12.21:0,12,157	0/1:16,0:19:3.09:3,0,12	0/0:19,0:18:0.52:0,1,2	0/0:25,0:22:51.17:0,51,820	1/1:22,0:22:15.06:95,15,0	0/0:14,0:20:50.49:0,50,731	0/0:14,0:14:18.39:0,18,243	0/1:16,0:18:13.49:67,0,13	0/1:15,0:15:6.39:67,0,6	0/0:16,0:16:20.89:0,21,306	1/1:21,0:28:3.39:46,3,0	0/0:28,0:28:47.58:0,48,754	0/0:36,0:36:59.72:0,60,888	0/0:27,0:26:51.12:0,51,744	0/1:21,0:18:1.46:121,0,1	1/1:15,0:15:3.48:63,3,0	1/1:57,0:58:13.02:402,13,0	0/1:14,0:15:24.11:66,0,24	1/1:10,0:12:8.19:97,8,0	0/1:32,0:32:3.32:78,0,3	0/0:11,0:11:23.50:0,24,357	0/0:29,0:29:84.63:0,85,1292	0/1:11,16:27:23.45:148,0,23	0/0:17,0:15:36.11:0,36,541
chr10	46705810	.	GTC	G	4039.83	PASS	AB=1.000;AC=28;AF=0.500;AN=56;BaseQRankSum=6.881;DP=675;FS=10.349;HRun=0;HaplotypeScore=138.4439;InbreedingCoeff=0.7555;MQ=56.14;MQ0=27;MQRankSum=4.084;QD=11.28;ReadPosRankSum=2.324;VQSLOD=2.7298;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:32,0:30:27.42:460,0,27	1/1:11,0:11:23.62:163,24,0	0/0:29,0:6:5.60:0,6,48	0/0:51,0:18:39.17:0,39,363	0/0:19,0:17:11.88:0,12,91	1/1:18,2:20:2.03:190,2,0	1/1:19,0:18:20.53:225,21,0	0/0:24,0:20:50.92:0,51,439	1/1:21,2:23:35.26:262,35,0	0/0:20,0:20:38.28:0,38,389	0/0:14,0:14:17.72:0,18,149	1/1:19,0:19:3.54:141,4,0	1/1:17,0:17:30.05:216,30,0	0/0:15,0:15:16.77:0,17,121	1/1:28,0:28:59.02:462,59,0	0/0:28,0:28:51.01:0,51,382	0/0:36,0:36:57.27:0,57,433	0/0:26,0:25:54.63:0,55,370	1/1:22,0:19:33.23:257,33,0	1/1:15,0:15:20.83:175,21,0	1/1:61,0:60:63.45:736,63,0	0/1:17,0:16:6.23:166,0,6	1/1:14,0:13:2.55:51,3,0	1/1:33,1:33:39.81:413,40,0	0/0:10,0:10:23.97:0,24,200	0/0:29,0:29:82.74:0,83,710	1/1:26,0:25:5.41:124,5,0	0/0:16,0:14:35.91:0,36,288
chr10	46705812	.	CTGTGTGTGTG	C	1343.44	PASS	AB=0.843;AC=18;AF=0.333;AN=54;BaseQRankSum=1.678;DP=677;FS=2.750;HRun=0;HaplotypeScore=221.8351;InbreedingCoeff=0.4148;MQ=53.96;MQ0=27;MQRankSum=-5.666;QD=4.94;ReadPosRankSum=-0.806;VQSLOD=2.2315;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:31:26.30:0,26,425	0/0:10,0:10:2.94:0,3,18	./.	0/0:49,0:16:0:0,0,0	0/1:9,10:17:0.31:0,0,1	0/1:21,0:21:51.37:90,0,51	1/1:20,0:21:2.06:5,2,0	0/0:23,0:19:2.88:0,3,15	0/0:24,0:24:24.97:0,25,558	1/1:21,0:21:17.71:314,18,0	1/1:8,4:12:0.80:2,1,0	0/0:18,0:18:21.94:0,22,651	0/0:19,0:19:22.89:0,23,555	0/1:8,7:15:8.96:163,0,9	0/1:28,0:28:0.34:0,0,1	1/1:13,12:27:14.68:232,15,0	0/1:26,1:36:9.67:174,0,10	1/1:17,8:25:11.40:241,11,0	0/0:23,0:19:12.93:0,13,264	0/0:15,0:15:15.04:0,15,298	0/0:62,0:61:66.69:0,67,1571	0/0:17,0:16:20.16:0,20,669	0/0:15,0:14:8.23:0,8,326	0/0:34,0:33:30.08:0,30,790	0/0:8,1:10:0:0,0,1	0/1:27,0:29:27.85:207,0,28	0/0:25,0:24:21.35:0,21,535	1/1:16,0:14:3.01:68,3,0
chr10	46705872	.	GAGAGAC	G	1902.92	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.630;DP=708;FS=11.081;HRun=0;HaplotypeScore=209.3199;InbreedingCoeff=0.9212;MQ=78.93;MQ0=18;MQRankSum=-8.001;QD=31.20;ReadPosRankSum=-4.297;VQSLOD=1.6143;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:28:66.20:0,66,1979	0/0:5,0:12:20.89:0,21,471	0/0:68,0:31:5:0,5,462	0/0:89,0:51:49.63:0,50,859	0/0:18,0:18:32.72:0,33,1078	1/1:9,23:31:54.86:1063,55,0	1/1:10,19:29:47.76:962,48,0	0/0:17,0:17:36.12:0,36,1147	0/0:21,0:21:42.14:0,42,1319	0/0:18,0:18:48.16:0,48,1533	0/0:12,0:12:13.84:0,14,482	0/0:23,0:23:41.87:0,42,1345	0/0:16,0:16:45.13:0,45,1389	0/0:21,0:20:42.02:0,42,1379	0/0:14,0:32:43.70:0,44,1081	0/0:25,0:25:45.15:0,45,1350	0/0:44,0:44:93.32:0,93,2969	0/0:19,0:19:24.06:0,24,706	0/0:13,0:13:30.09:0,30,788	0/0:13,0:13:36.12:0,36,1146	0/0:36,0:36:81.26:0,81,2551	0/0:18,0:18:39.61:0,40,1225	0/0:12,0:12:24.08:0,24,753	0/0:22,0:22:54.17:0,54,1695	0/0:19,0:19:47.39:0,47,1478	0/0:21,0:21:51.18:0,51,1602	0/0:9,0:9:18.06:0,18,549	0/0:17,0:17:51.18:0,51,1602
chr10	46706560	.	ATGTTTGTTTGTTTGTT	A	27571.30	PASS	AB=0.622;AC=49;AF=0.907;AN=54;BaseQRankSum=6.169;DP=613;FS=1.999;HRun=0;HaplotypeScore=277.6430;InbreedingCoeff=0.6392;MQ=57.68;MQ0=1;MQRankSum=-3.806;QD=50.59;ReadPosRankSum=6.141;VQSLOD=4.0644;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:18,8:25:20.47:906,20,0	1/1:5,3:8:9.03:397,9,0	0/0:28,0:23:27.09:0,27,1257	0/0:16,0:15:21.07:0,21,1282	1/1:14,14:28:27.01:1004,27,0	1/1:15,18:33:51.17:2216,51,0	1/1:8,6:14:6.01:265,6,0	./.	1/1:10,13:23:30.10:1323,30,0	1/1:20,14:34:42.10:1464,42,0	1/1:8,11:19:27.09:1171,27,0	0/1:9,14:23:3.26:1420,0,3	1/1:6,13:19:33.11:1455,33,0	1/1:7,14:21:39.13:1720,39,0	1/1:9,15:24:36.12:1572,36,0	1/1:7,9:16:18.06:794,18,0	1/1:7,9:16:12.04:529,12,0	1/1:14,6:19:15.05:645,15,0	1/1:14,4:18:12.02:256,12,0	1/1:16,10:26:21.02:765,21,0	1/1:10,3:13:1.06:127,1,0	1/1:13,16:29:45.15:1933,45,0	1/1:11,11:22:31.61:1091,32,0	1/1:13,6:19:6.02:248,6,0	1/1:5,15:20:30.10:1276,30,0	1/1:16,14:30:45.15:1984,45,0	1/1:11,24:35:57.67:2482,58,0	1/1:5,4:9:12.04:529,12,0
chr10	46706890	.	C	CA	1179.77	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-8.349;DP=664;FS=2.806;HRun=9;HaplotypeScore=74.1315;InbreedingCoeff=0.9865;MQ=65.23;MQ0=1;MQRankSum=3.091;QD=22.69;ReadPosRankSum=0.763;VQSLOD=4.5621;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:34:71.02:0,71,690	0/0:6,0:6:14.99:0,15,130	0/0:21,0:18:25.77:0,26,195	0/0:30,0:30:59.77:0,60,513	0/0:41,0:41:99:0,102,883	1/1:4,25:29:52.17:804,52,0	1/1:2,21:23:45.12:498,45,0	0/0:28,0:28:80.97:0,81,700	0/0:19,0:19:53.97:0,54,465	0/0:23,0:23:53.97:0,54,469	0/0:20,0:20:47.98:0,48,416	0/0:15,0:15:32.97:0,33,285	0/0:17,0:17:41.98:0,42,364	0/0:20,0:20:17.81:0,18,383	0/0:21,0:21:53.99:0,54,468	0/0:25,0:26:65.02:0,65,553	0/0:27,0:27:77.98:0,78,677	0/0:22,0:22:59.93:0,60,509	0/0:25,0:26:55.99:0,56,472	0/0:36,0:36:89.95:0,90,780	0/0:21,0:21:59.99:0,60,521	0/0:30,0:30:80.96:0,81,702	0/0:25,0:25:68.97:0,69,597	0/0:13,0:13:35.95:0,36,305	0/0:22,0:22:56.98:0,57,494	0/0:27,0:27:74.96:0,75,648	0/0:27,0:26:59.92:0,60,508	0/0:14,0:14:38.99:0,39,339
chr10	46709313	.	AAAT	A	13503.81	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=8.353;DP=635;FS=1.665;HRun=0;HaplotypeScore=116.9620;InbreedingCoeff=0.9997;MQ=80.05;MQ0=0;MQRankSum=-4.734;QD=41.81;ReadPosRankSum=4.405;VQSLOD=6.3811;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,39:43:99:1616,111,0	1/1:0,12:12:36.12:569,36,0	0/0:25,0:25:72.19:0,72,1312	0/0:13,0:13:36.03:0,36,594	0/0:33,0:33:96.30:0,96,1974	1/1:7,11:18:51.10:733,51,0	1/1:0,20:20:54.10:797,54,0	0/0:36,0:36:99:0,102,2042	1/1:4,12:16:45.12:681,45,0	0/0:22,0:21:63.18:0,63,1266	0/0:24,0:24:69.24:0,69,1470	1/1:3,27:30:84.21:1273,84,0	1/1:0,16:16:42.14:663,42,0	0/0:20,0:20:57.20:0,57,1227	1/1:1,21:22:66.18:1012,66,0	0/0:26,0:26:71.70:0,72,1356	0/0:18,0:18:51.15:0,51,1054	0/0:20,0:20:54.14:0,54,1080	1/1:0,24:24:72.17:1053,72,0	1/1:4,17:21:57.11:846,57,0	1/1:0,10:10:24.04:351,24,0	1/1:3,19:22:57.13:832,57,0	1/1:1,19:20:57.19:900,57,0	1/1:0,17:17:51.17:806,51,0	0/0:23,0:23:66.23:0,66,1400	0/0:37,0:37:99:0,108,2123	1/1:3,29:32:90.25:1372,90,0	0/0:15,0:15:39.13:0,39,839
chr10	46709403	.	TACTC	T	28541.69	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=0.417;DP=668;FS=7.349;HRun=0;HaplotypeScore=160.0148;InbreedingCoeff=0.9998;MQ=74.26;MQ0=0;MQRankSum=-9.071;QD=44.74;ReadPosRankSum=5.483;VQSLOD=5.1993;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,35:38:84.29:1526,84,0	1/1:0,14:14:36.12:662,36,0	0/0:16,0:16:45.15:0,45,1163	0/0:14,0:14:41.17:0,41,977	1/1:1,27:28:63.22:1159,63,0	1/1:5,19:24:54.19:993,54,0	1/1:7,20:27:48.16:865,48,0	1/1:4,30:34:90.28:1594,90,0	1/1:2,19:21:51.17:938,51,0	1/1:2,22:24:66.23:1214,66,0	1/1:0,13:13:36.12:644,36,0	1/1:2,30:32:87.30:1600,87,0	1/1:3,15:18:48.16:883,48,0	1/1:1,26:27:75.26:1363,75,0	1/1:1,22:23:66.23:1214,66,0	1/1:2,20:22:51.17:938,51,0	1/1:0,16:16:45.15:825,45,0	1/1:1,20:21:45.15:828,45,0	1/1:6,23:29:66.23:1213,66,0	1/1:1,27:28:57.20:1049,57,0	1/1:1,21:22:42.14:755,42,0	1/1:2,22:24:57.20:1049,57,0	1/1:0,20:20:48.16:880,48,0	1/1:2,21:23:51.06:938,51,0	1/1:2,22:24:60.21:1087,60,0	1/1:4,30:34:93.31:1673,93,0	1/1:2,33:35:96.33:1766,96,0	1/1:1,16:17:48.16:883,48,0
chr10	46709950	.	A	AC	26193.38	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-7.275;DP=706;FS=2.469;HRun=2;HaplotypeScore=62.4331;InbreedingCoeff=0.9843;MQ=73.87;MQ0=0;MQRankSum=-7.935;QD=39.04;ReadPosRankSum=5.264;VQSLOD=5.0644;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,45:49:99:2009,141,0	1/1:2,6:8:21.07:291,21,0	0/0:19,0:19:49.87:0,50,587	0/0:16,0:14:16.80:0,17,353	1/1:1,28:29:78.26:1121,78,0	1/1:0,19:19:54.18:778,54,0	1/1:1,24:25:63.21:907,63,0	1/1:1,29:30:87.29:1244,87,0	1/1:2,27:29:78.26:1123,78,0	1/1:2,29:32:90.30:1278,90,0	1/1:1,25:26:69.23:994,69,0	1/1:0,28:28:75.25:1076,75,0	1/1:3,37:40:96.32:1383,96,0	1/1:1,21:22:60.20:857,60,0	1/1:1,36:37:99:1426,99,0	1/1:0,16:16:45.15:648,45,0	1/1:2,24:26:66.22:947,66,0	1/1:0,22:22:63.21:907,63,0	1/1:0,22:22:66.14:883,66,0	1/1:0,23:23:60.67:864,61,0	1/1:1,33:34:90.30:1296,90,0	1/1:2,33:35:87.28:1232,87,0	1/1:0,15:15:45.15:648,45,0	1/1:0,21:21:63.21:907,63,0	1/1:0,29:29:78.26:1124,78,0	1/1:1,24:25:72.23:1014,72,0	1/1:0,22:24:72.24:1021,72,0	1/1:0,5:5:15.05:216,15,0
chr10	46710139	.	C	CT	9700.35	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-16.512;DP=718;FS=1.623;HRun=4;HaplotypeScore=63.1846;InbreedingCoeff=0.9665;MQ=79.04;MQ0=0;MQRankSum=-1.492;QD=36.74;ReadPosRankSum=1.328;VQSLOD=5.0927;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,123,1394	0/0:10,0:10:30.09:0,30,340	0/0:21,0:21:59.06:0,59,599	0/0:17,0:16:22.35:0,22,355	1/1:1,22:23:63.15:833,63,0	0/0:20,0:20:54.15:0,54,612	0/0:23,0:23:66.15:0,66,726	1/1:1,35:36:99:1384,105,0	0/0:31,0:31:90.24:0,90,1011	1/1:2,30:32:90.25:1176,90,0	1/1:0,15:15:42.05:532,42,0	0/0:26,0:26:69.16:0,69,763	0/0:21,0:21:60.17:0,60,680	1/1:1,26:27:69.23:944,69,0	0/0:40,0:40:99:0,108,1202	1/1:5,22:27:1.17:794,1,0	1/1:1,18:19:51.17:693,51,0	1/1:0,22:22:66.22:903,66,0	0/0:18,0:18:51.13:0,51,569	0/0:25,0:25:66.14:0,66,732	0/0:41,0:41:99:0,123,1383	0/0:27,0:27:75.20:0,75,840	0/0:26,0:26:69.20:0,69,783	0/0:36,0:36:99:0,102,1136	1/1:0,25:25:66.22:903,66,0	1/1:0,30:30:90.28:1212,90,0	0/0:29,0:29:81.20:0,81,900	1/1:0,8:8:24.08:328,24,0
chr10	46710878	.	AT	A	4128.35	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-8.382;DP=337;FS=2.062;HRun=5;HaplotypeScore=50.4867;InbreedingCoeff=0.9360;MQ=78.05;MQ0=1;MQRankSum=-2.009;QD=24.14;ReadPosRankSum=2.827;VQSLOD=2.5490;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,16:16:42.12:475,42,0	1/1:12,0:12:29.72:209,30,0	0/0:17,0:11:16.84:0,17,190	0/0:9,0:6:8.88:0,9,79	0/0:13,0:13:23.87:0,24,341	1/1:2,25:27:57.16:645,57,0	1/1:1,6:7:15.04:170,15,0	0/0:35,0:35:69.94:0,70,761	1/1:0,7:7:18.05:204,18,0	0/0:10,0:10:30.04:0,30,312	0/0:7,0:7:17.87:0,18,160	1/1:0,8:8:12.03:136,12,0	1/1:1,5:6:5.96:52,6,0	0/0:7,0:7:15.01:0,15,139	1/1:10,0:10:23.81:171,24,0	0/0:7,0:7:21.05:0,21,233	0/0:9,0:9:23.99:0,24,241	0/0:17,0:17:42.08:0,42,441	1/1:2,16:18:48.06:511,48,0	1/1:1,15:16:41.98:432,42,0	1/1:1,4:5:12.03:136,12,0	1/1:0,2:2:6.02:68,6,0	1/1:1,9:10:20.87:221,21,0	1/1:0,4:4:9.03:102,9,0	0/0:9,0:9:24.05:0,24,256	0/0:11,0:11:30.05:0,30,343	1/1:3,20:23:54.12:598,54,0	0/0:15,0:15:41.33:0,41,443
chr10	46710882	.	TTA	T	889.80	PASS	AB=0.993;AC=20;AF=0.357;AN=56;BaseQRankSum=-3.684;DP=347;FS=0.000;HRun=0;HaplotypeScore=69.8652;InbreedingCoeff=0.3910;MQ=74.90;MQ0=1;MQRankSum=-0.940;QD=5.46;ReadPosRankSum=0.732;VQSLOD=2.5865;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:17,0:17:1.08:1,0,24	1/1:0,11:11:30.05:443,30,0	0/1:16,0:10:7.01:7,0,283	0/0:11,0:7:12.34:0,12,153	0/0:13,0:13:38.84:0,39,507	0/1:26,0:26:3.03:3,0,12	1/1:6,0:6:2.36:4,2,0	0/0:36,0:36:99:0,105,1163	0/0:9,0:9:3.45:0,3,52	0/0:11,0:11:33.05:0,33,423	0/0:8,0:8:23.08:0,23,230	0/0:9,0:9:1.87:0,2,21	0/1:6,0:6:14.39:14,0,26	0/0:9,0:9:20.20:0,20,172	1/1:0,10:10:24.08:379,24,0	0/0:7,0:7:21.06:0,21,312	0/0:10,0:10:24.01:0,24,341	0/0:18,0:18:44.70:0,45,620	0/1:19,0:19:32.66:60,0,33	1/1:15,0:15:13.13:67,13,0	0/0:5,0:5:1.86:0,2,20	1/1:2,0:2:0.94:2,1,0	1/1:9,0:9:5.64:21,6,0	1/1:4,0:4:1.41:3,1,0	0/0:11,0:11:29.25:0,29,355	0/0:12,0:12:35.46:0,35,484	0/1:21,1:22:19.05:47,0,19	0/0:15,0:15:42.01:0,42,630
chr10	46710891	.	A	AAT	5954.91	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-12.494;DP=356;FS=0.432;HRun=0;HaplotypeScore=55.1402;InbreedingCoeff=0.8232;MQ=75.64;MQ0=1;MQRankSum=0.776;QD=38.42;ReadPosRankSum=-1.772;VQSLOD=5.7210;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:51.12:0,51,565	0/0:10,0:10:1.30:0,1,167	0/0:18,0:12:14.84:0,15,142	0/0:11,0:7:6.32:0,6,47	1/1:1,13:14:38.97:542,39,0	0/0:23,0:23:44.17:0,44,623	0/0:5,0:5:14.99:0,15,162	1/1:1,34:36:99:1445,102,0	0/0:11,0:11:0.35:0,0,188	1/1:2,10:12:29.74:423,30,0	1/1:0,9:9:20.98:327,21,0	0/0:8,0:8:18.05:0,18,207	0/0:6,0:6:12.02:0,12,123	1/1:1,7:8:9.03:155,9,0	0/0:8,0:8:24.02:0,24,223	1/1:0,8:8:18.06:311,18,0	1/1:2,9:11:24.01:380,24,0	1/1:0,17:17:38.76:672,39,0	0/0:19,0:19:21.45:0,21,462	0/0:16,0:16:26.56:0,27,370	0/0:5,0:5:5.57:0,6,137	0/0:3,0:3:2.06:0,2,56	0/0:9,0:9:14.58:0,15,217	0/0:4,0:4:1.67:0,2,86	1/1:0,11:11:24.08:414,24,0	1/1:0,14:14:42.04:612,42,0	0/0:25,0:25:55.31:0,55,633	1/1:1,14:15:41.50:674,42,0
chr10	46712281	.	TG	T	8695.86	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=11.314;DP=714;FS=13.688;HRun=3;HaplotypeScore=73.0725;InbreedingCoeff=0.9997;MQ=91.55;MQ0=0;MQRankSum=-1.992;QD=34.51;ReadPosRankSum=1.140;VQSLOD=4.1875;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,105,1470	0/0:13,0:13:39.10:0,39,540	0/0:30,0:30:90.30:0,90,1275	0/0:27,0:27:75.07:0,75,1010	1/1:0,24:24:69.22:855,69,0	0/0:25,0:25:75.22:0,75,1042	0/0:25,0:25:66.22:0,66,950	1/1:2,19:21:57.14:679,57,0	0/0:17,0:17:48.13:0,48,655	1/1:1,31:32:93.27:1138,93,0	1/1:0,18:18:51.16:632,51,0	0/0:35,0:35:99:0,102,1428	0/0:25,0:25:75.25:0,75,1072	1/1:0,20:20:57.18:705,57,0	0/0:34,0:34:99:0,102,1446	1/1:0,25:25:66.21:819,66,0	1/1:1,33:34:96.30:1190,96,0	1/1:1,17:18:48.15:595,48,0	0/0:20,0:20:60.20:0,60,860	0/0:25,0:25:75.21:0,75,1052	0/0:61,0:61:99:0,175,2487	0/0:22,0:22:60.19:0,60,846	0/0:13,0:13:39.13:0,39,559	0/0:27,0:27:78.26:0,78,1123	1/1:1,21:22:60.19:744,60,0	1/1:2,28:30:84.26:1041,84,0	0/0:28,0:28:78.25:0,78,1103	1/1:0,8:8:24.08:297,24,0
chr10	46713223	.	AAAAAAAAAAAC	A	1399.40	PASS	AB=0.963;AC=19;AF=0.339;AN=56;BaseQRankSum=-5.861;DP=432;FS=14.592;HRun=0;HaplotypeScore=122.4083;InbreedingCoeff=0.6802;MQ=25.07;MQ0=78;MQRankSum=-1.630;QD=11.47;ReadPosRankSum=2.444;VQSLOD=1.0425;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:14,4:18:2.02:340,2,0	0/0:6,0:4:12.03:0,12,262	0/0:25,0:5:12.51:0,13,224	0/0:29,0:2:2.84:0,3,14	0/0:19,0:16:36.02:0,36,585	0/0:15,0:14:26.77:0,27,425	0/0:11,0:8:16.99:0,17,204	0/0:25,0:17:39.08:0,39,655	1/1:10,1:10:14.19:202,14,0	0/0:23,0:18:54.11:0,54,1005	0/0:22,0:19:46:0,46,790	0/1:7,1:7:3.32:133,0,3	1/1:3,1:4:11.72:132,12,0	0/0:13,0:11:23.99:0,24,460	0/0:13,0:11:27.05:0,27,590	0/0:14,0:10:22.82:0,23,330	0/0:25,0:12:18.45:0,18,300	0/0:17,0:6:14.97:0,15,189	1/1:17,1:8:20.10:182,20,0	0/1:11,0:7:20.63:61,0,21	1/1:9,0:6:13.82:89,14,0	0/1:3,0:2:5.76:11,0,6	1/1:10,1:11:14.73:151,15,0	1/1:16,1:6:5.03:94,5,0	0/0:14,0:10:18:0,18,338	0/0:27,0:23:58:0,58,1153	1/1:11,1:9:10.25:195,10,0	0/0:12,0:5:6.02:0,6,109
chr10	46713234	.	CCA	C	1333.94	PASS	AB=0.984;AC=39;AF=0.696;AN=56;BaseQRankSum=4.438;DP=395;FS=0.000;HRun=0;HaplotypeScore=80.5635;InbreedingCoeff=0.2476;MQ=26.03;MQ0=66;MQRankSum=1.442;QD=4.55;ReadPosRankSum=3.316;VQSLOD=2.2578;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,0:9:19.04:89,19,0	1/1:2,3:4:11.07:139,11,0	0/0:31,0:5:10.59:0,11,69	0/0:32,0:3:3.17:0,3,14	0/1:16,0:14:3.59:52,0,4	1/1:9,6:14:11.63:191,12,0	1/1:7,5:9:19.74:203,20,0	0/1:28,0:20:6.69:7,0,45	1/1:5,0:4:10.62:47,11,0	0/1:22,0:18:14.88:15,0,65	0/1:22,0:20:6.28:48,0,6	1/1:4,0:4:10.24:41,10,0	1/1:3,0:2:5.75:30,6,0	0/0:12,0:11:6.27:0,6,41	1/1:6,7:11:14.64:303,15,0	0/1:14,0:10:8.34:21,0,8	0/0:26,0:17:11.68:0,12,38	0/1:17,1:7:0.30:0,0,29	1/1:12,0:4:10.24:41,10,0	1/1:9,0:5:12.88:52,13,0	1/1:6,0:3:5.40:25,5,0	1/1:1,0:1:2.60:10,3,0	1/1:4,0:4:11:52,11,0	1/1:11,0:3:2.87:15,3,0	0/1:16,1:13:8.66:9,0,71	0/1:27,1:24:44.29:44,0,104	1/1:9,0:7:15.17:63,15,0	0/1:10,0:5:0.30:1,0,0
chr10	46713235	.	CA	C	2038.44	PASS	AB=0.854;AC=50;AF=0.893;AN=56;BaseQRankSum=2.033;DP=396;FS=1.125;HRun=10;HaplotypeScore=74.9770;InbreedingCoeff=0.2827;MQ=26.81;MQ0=63;MQRankSum=1.828;QD=6.14;ReadPosRankSum=0.196;VQSLOD=1.4232;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,3:9:16.40:114,16,0	0/1:5,0:4:7.67:36,0,8	0/0:30,0:5:11.62:0,12,73	0/0:34,0:4:4.41:0,4,14	1/1:5,11:14:29.34:163,29,0	1/1:15,0:14:8.95:81,9,0	1/1:12,0:9:3.92:61,4,0	1/1:16,10:19:24.07:193,24,0	1/1:3,2:4:8.22:58,8,0	1/1:9,14:19:18:157,18,0	1/1:5,17:20:35.06:181,35,0	1/1:1,3:4:11.22:84,11,0	1/1:4,0:3:3.78:11,4,0	1/1:6,7:12:5.82:48,6,0	1/1:13,0:11:7.72:94,8,0	1/1:11,3:10:19.16:117,19,0	1/1:19,7:17:15.83:64,16,0	1/1:16,2:7:2.68:50,3,0	1/1:9,3:4:11.09:73,11,0	1/1:4,4:5:12:103,12,0	1/1:5,1:3:3:25,3,0	1/1:0,1:1:3:26,3,0	1/1:2,2:4:6:51,6,0	1/1:10,1:3:2.11:7,2,0	0/1:10,7:13:16.88:45,0,17	1/1:15,13:24:16.65:200,17,0	1/1:6,4:8:14.18:102,14,0	1/1:9,1:5:4.15:19,4,0
chr10	46713241	.	AAAAACAAAAAAAAC	A	1540.74	PASS	AB=1.000;AC=24;AF=0.429;AN=56;BaseQRankSum=2.212;DP=412;FS=12.933;HRun=0;HaplotypeScore=145.1904;InbreedingCoeff=0.7094;MQ=29.93;MQ0=51;MQRankSum=-1.449;QD=13.88;ReadPosRankSum=-3.225;VQSLOD=0.9655;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:7,4:11:23.14:418,23,0	0/0:4,0:4:8.91:0,9,263	0/0:34,0:7:17.12:0,17,374	0/0:34,0:5:5.84:0,6,53	0/0:16,0:15:35.61:0,36,915	0/1:16,0:15:8.29:8,0,248	0/1:14,0:12:58.15:58,0,194	0/0:27,0:22:45.99:0,46,918	1/1:5,1:5:13.17:170,13,0	0/0:23,0:20:54.14:0,54,1275	0/0:24,0:22:45.62:0,46,1144	1/1:3,1:4:11.29:150,11,0	1/1:6,1:6:4.97:161,5,0	0/0:14,0:13:21.07:0,21,572	0/0:12,0:11:25.13:0,25,573	0/0:12,0:9:11.48:0,11,478	0/0:28,0:20:27.09:0,27,581	0/0:18,0:8:18.64:0,19,322	1/1:12,1:5:14.77:202,15,0	1/1:9,0:6:16.91:107,17,0	1/1:4,0:1:2.90:16,3,0	1/1:3,0:3:8.75:66,9,0	1/1:5,1:6:14.72:114,15,0	1/1:8,0:3:2.95:105,3,0	0/0:15,0:12:21.05:0,21,534	0/0:30,0:26:49.10:0,49,1514	1/1:9,1:8:6.14:167,6,0	0/0:10,0:5:6.02:0,6,120
chr10	46713245	.	AC	A	1621.23	PASS	AB=1.000;AC=49;AF=0.875;AN=56;BaseQRankSum=6.222;DP=384;FS=1.791;HRun=1;HaplotypeScore=87.5159;InbreedingCoeff=0.2539;MQ=36.34;MQ0=28;MQRankSum=-5.231;QD=5.05;ReadPosRankSum=7.357;VQSLOD=0.5006;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,0:10:22.77:121,23,0	1/1:3,0:3:4.94:22,5,0	0/0:29,2:7:15.51:0,16,136	0/0:32,0:7:7.04:0,7,33	1/1:20,1:21:6.81:93,7,0	1/1:13,1:14:19.96:103,20,0	1/1:14,0:13:14.20:91,14,0	1/1:28,0:25:0.03:103,0,0	1/1:5,0:5:6.19:54,6,0	0/1:20,0:20:2.40:68,0,2	1/1:22,0:20:24.62:95,25,0	1/1:4,0:4:11.69:70,12,0	1/1:6,1:6:3.20:51,3,0	1/1:14,1:14:5:42,5,0	0/1:12,0:12:15.80:59,0,16	1/1:9,0:6:15.08:59,15,0	1/1:24,0:20:8.57:34,9,0	1/1:16,0:8:4.02:50,4,0	1/1:10,0:5:14.07:73,14,0	1/1:8,0:7:17.04:95,17,0	1/1:3,0:1:2.94:18,3,0	1/1:4,0:4:8.01:38,8,0	1/1:7,0:7:14.13:74,14,0	1/1:5,1:3:2.87:15,3,0	0/1:14,0:11:6.97:18,0,7	1/1:26,0:24:30.57:166,31,0	1/1:11,0:10:19.84:111,20,0	1/1:8,0:4:5.47:30,5,0
chr10	46713252	.	AAAC	A	2633.74	PASS	AB=1.000;AC=28;AF=0.500;AN=56;BaseQRankSum=-0.032;DP=404;FS=13.239;HRun=0;HaplotypeScore=100.9273;InbreedingCoeff=0.8086;MQ=42.81;MQ0=14;MQRankSum=-5.895;QD=20.26;ReadPosRankSum=0.612;VQSLOD=2.4597;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,6:10:24.08:369,24,0	0/1:5,0:5:9.11:24,0,9	0/0:30,0:10:20.17:0,20,269	0/0:32,0:8:12.28:0,12,95	0/0:22,0:22:56.98:0,57,659	1/1:8,6:14:20.73:215,21,0	1/1:7,6:13:24.81:192,25,0	0/0:30,0:29:74.94:0,75,743	1/1:2,4:6:15.01:205,15,0	0/0:22,0:22:66:0,66,810	0/0:24,0:22:57.03:0,57,671	1/1:2,3:5:15.01:206,15,0	1/1:3,6:8:15.01:193,15,0	0/0:15,0:14:24.08:0,24,320	0/1:12,0:12:16.62:17,0,55	0/0:11,0:8:24.05:0,24,282	0/0:25,0:23:30.08:0,30,367	0/0:14,0:8:20.97:0,21,221	1/1:3,6:7:18.05:258,18,0	1/1:0,7:7:21.07:322,21,0	1/1:4,0:3:5.98:54,6,0	1/1:1,4:5:11.93:148,12,0	1/1:1,10:11:18.95:276,19,0	1/1:8,0:5:8.96:72,9,0	0/0:16,0:14:21.06:0,21,272	0/0:28,0:26:71.21:0,71,833	1/1:3,9:11:24.01:304,24,0	0/0:5,0:3:6:0,6,61
chr10	46713253	.	AAC	A	1792.42	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=2.717;DP=403;FS=18.169;HRun=0;HaplotypeScore=99.7108;InbreedingCoeff=0.9204;MQ=45.07;MQ0=8;MQRankSum=-4.596;QD=13.89;ReadPosRankSum=0.204;VQSLOD=2.1468;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:10,0:10:24:210,24,0	1/1:5,0:5:11.73:58,12,0	0/0:30,0:10:20.18:0,20,230	0/0:32,0:9:11.68:0,12,76	0/0:22,0:22:55.26:0,55,478	1/1:14,0:14:20.52:153,21,0	1/1:12,1:13:24.84:178,25,0	0/0:31,0:30:76.84:0,77,561	1/1:6,0:6:14.96:125,15,0	0/0:23,0:23:65.64:0,66,585	0/0:23,0:22:56.78:0,57,512	1/1:5,0:5:14.97:126,15,0	1/1:8,1:8:14.96:123,15,0	0/0:15,0:15:23.96:0,24,229	1/1:12,0:12:4.03:65,4,0	0/0:11,0:9:26.95:0,27,238	0/0:25,0:23:29.75:0,30,253	0/0:13,0:8:23.79:0,24,181	1/1:7,1:7:18.01:165,18,0	1/1:7,0:7:20.92:181,21,0	1/1:3,1:3:5.98:63,6,0	1/1:4,1:5:11.92:114,12,0	1/1:11,0:11:18.80:155,19,0	1/1:8,1:6:11.96:107,12,0	0/0:16,0:14:20.93:0,21,192	0/0:28,0:26:70.74:0,71,595	1/1:10,1:11:23.35:192,23,0	0/0:4,0:3:5.99:0,6,49
chr10	46713254	.	A	AC	4050.11	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-8.958;DP=398;FS=10.603;HRun=1;HaplotypeScore=87.7935;InbreedingCoeff=0.9003;MQ=45.73;MQ0=4;MQRankSum=1.887;QD=19.19;ReadPosRankSum=1.354;VQSLOD=2.8797;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:18.06:0,18,58	0/0:5,0:5:14.88:0,15,116	0/0:28,0:10:20.90:0,21,192	0/0:31,0:9:3.24:0,3,51	1/1:7,16:23:36.86:474,37,0	0/0:13,0:13:15.41:0,15,73	0/0:11,0:11:18.10:0,18,81	1/1:20,12:31:59.76:804,60,0	0/0:6,0:6:11.99:0,12,47	1/1:2,22:24:59.09:609,59,0	1/1:6,16:21:55.84:452,56,0	0/0:5,0:5:11.84:0,12,47	0/0:9,0:8:12.64:0,13,57	1/1:3,12:15:17.01:168,17,0	0/0:14,0:14:29.85:0,30,269	1/1:9,2:9:26.52:252,27,0	1/1:4,21:23:19.03:272,19,0	1/1:10,2:8:22.78:221,23,0	0/0:8,0:7:14.33:0,14,57	0/0:7,0:7:16.53:0,17,60	0/0:4,0:3:5.33:0,5,27	0/0:5,0:5:9.56:0,10,38	0/0:11,0:11:14.46:0,14,54	0/0:9,0:6:11.04:0,11,61	1/1:2,14:14:20.87:201,21,0	1/1:7,21:26:26.07:542,26,0	0/0:11,0:11:18.80:0,19,75	1/1:1,1:2:6:55,6,0
chr10	46714114	.	GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAA	G	2703.90	PASS	AB=1.000;AC=18;AF=0.321;AN=56;BaseQRankSum=1.067;DP=355;FS=19.313;HRun=0;HaplotypeScore=194.4857;InbreedingCoeff=0.4423;MQ=43.54;MQ0=53;MQRankSum=1.736;QD=26.25;ReadPosRankSum=-1.688;VQSLOD=1.1519;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:9:8.96:154,9,0	0/1:10,0:9:20.50:215,0,20	1/1:8,0:1:2.92:17,3,0	0/0:15,0:4:3.07:0,3,105	0/0:15,0:13:18.05:0,18,662	0/1:20,0:16:54.02:54,0,427	0/0:17,0:11:7.25:0,7,77	0/0:19,0:18:15.38:0,15,1185	1/1:3,0:3:5.99:211,6,0	0/0:10,0:8:24.08:0,24,642	0/0:20,0:18:4.08:0,4,704	1/1:6,4:10:11.97:922,12,0	1/1:9,0:7:2.87:102,3,0	0/0:14,0:13:21.07:0,21,795	0/1:5,0:3:38.83:96,0,39	0/0:12,0:10:21.05:0,21,818	0/0:26,0:23:7.11:0,7,699	0/0:17,0:16:15.03:0,15,481	0/0:14,0:12:33.09:0,33,1057	0/1:9,0:9:24.94:25,0,147	0/0:9,0:6:9.03:0,9,292	1/1:6,3:6:14.14:851,14,0	1/1:6,1:7:2.78:231,3,0	0/0:12,0:7:6.02:0,6,182	0/0:18,0:16:24.08:0,24,758	0/0:8,0:8:21.05:0,21,600	0/0:14,0:14:39.13:0,39,1338	0/0:12,0:8:15.05:0,15,503
chr10	46714132	.	GAGAGAGAGAGAA	G	6730.52	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=1.580;DP=383;FS=3.995;HRun=0;HaplotypeScore=123.2697;InbreedingCoeff=0.6340;MQ=56.30;MQ0=27;MQRankSum=0.862;QD=19.23;ReadPosRankSum=2.897;VQSLOD=3.0533;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:12,0:9:14.98:125,15,0	1/1:8,0:8:11.94:168,12,0	0/0:14,0:6:4.47:0,4,112	0/0:19,0:9:14.79:0,15,163	1/1:1,13:13:9.03:321,9,0	1/1:17,0:17:41.78:398,42,0	1/1:15,0:12:19.44:159,19,0	1/1:19,0:19:45.58:410,46,0	1/1:13,0:13:26.01:199,26,0	1/1:18,0:17:50.88:446,51,0	1/1:13,0:13:2.92:17,3,0	1/1:14,0:14:38.80:593,39,0	1/1:8,0:6:11.88:86,12,0	1/1:16,0:15:29.82:230,30,0	1/1:2,0:2:5.99:50,6,0	1/1:3,9:10:12.04:451,12,0	1/1:5,16:21:12.81:177,13,0	1/1:1,14:15:9:250,9,0	1/1:11,0:10:26.78:234,27,0	1/1:15,0:15:35.70:323,36,0	1/1:7,0:5:8.96:70,9,0	1/1:24,0:23:47.46:608,47,0	1/1:12,0:12:14.93:189,15,0	1/1:10,0:7:10.68:82,11,0	1/1:20,0:18:32.98:340,33,0	1/1:8,0:8:23.98:216,24,0	1/1:16,2:18:47.25:502,47,0	1/1:7,0:6:7.43:89,7,0
chr10	46714142	.	GAA	G	6257.63	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=0.226;DP=438;FS=3.474;HRun=4;HaplotypeScore=89.4977;InbreedingCoeff=0.7791;MQ=64.46;MQ0=13;MQRankSum=-4.008;QD=15.72;ReadPosRankSum=3.632;VQSLOD=1.6173;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:13:20.97:174,21,0	1/1:9,0:9:14.94:123,15,0	0/0:17,0:9:13.48:0,13,185	0/0:23,0:13:25.35:0,25,259	1/1:13,0:13:8.93:65,9,0	1/1:20,0:20:47.76:375,48,0	1/1:16,0:15:29.84:232,30,0	1/1:5,21:26:71.80:602,72,0	1/1:15,0:15:32.68:250,33,0	1/1:20,0:20:59.89:533,60,0	1/1:1,14:15:2.92:17,3,0	1/1:17,0:17:47.76:388,48,0	1/1:6,0:6:11.88:86,12,0	1/1:18,0:17:32.81:254,33,0	1/1:4,0:4:11.98:98,12,0	1/1:11,0:10:12:104,12,0	1/1:21,0:21:13.04:77,13,0	1/1:15,0:15:8.99:77,9,0	1/1:15,0:15:41.94:365,42,0	1/1:19,0:19:47.67:368,48,0	1/1:8,0:7:14.96:119,15,0	1/1:25,0:24:50.45:423,50,0	1/1:17,0:17:29.90:242,30,0	1/1:10,0:9:12.31:84,12,0	1/1:20,0:19:35.91:292,36,0	1/1:11,0:11:32.99:293,33,0	1/1:24,1:25:68.16:501,68,0	1/1:7,0:6:14.95:118,15,0
chr10	46716441	.	T	TCAGGAGTGAA	79864.84	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-4.303;DP=843;FS=3.097;HRun=0;HaplotypeScore=175.0759;InbreedingCoeff=0.9040;MQ=50.79;MQ0=0;MQRankSum=-4.755;QD=96.92;ReadPosRankSum=3.056;VQSLOD=5.2838;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,26:42:87.21:4000,87,0	1/1:1,16:17:27.06:1289,27,0	0/0:9,0:8:9.03:0,9,202	0/0:10,0:10:9.38:0,9,252	1/1:10,22:37:75.06:2721,75,0	1/1:1,21:24:48.16:2535,48,0	1/1:5,12:23:30.10:1355,30,0	1/1:9,16:33:84.27:3240,84,0	1/1:7,30:40:78.23:3702,78,0	1/1:9,65:88:99:10304,229,0	1/1:7,41:52:99:5103,111,0	1/1:8,18:28:60.12:2547,60,0	1/1:4,24:31:69.24:3371,69,0	1/1:2,27:32:69.24:3522,69,0	1/1:8,33:41:99:4854,99,0	1/1:2,37:44:86.99:4555,87,0	1/1:5,9:15:30.10:1559,30,0	1/1:1,5:6:9.03:362,9,0	1/1:6,15:22:63.22:2456,63,0	1/1:7,26:35:72.25:3340,72,0	1/1:9,9:22:24.08:1041,24,0	1/1:4,30:35:75.17:3526,75,0	1/1:1,18:23:45.61:2175,46,0	1/1:5,16:24:30.06:1414,30,0	1/1:5,24:32:57.20:2959,57,0	1/1:3,22:28:75.26:3430,75,0	1/1:4,31:41:71.97:3606,72,0	1/1:0,8:9:18.06:898,18,0
chr10	46721939	.	AT	A	10775.10	PASS	AB=0.545;AC=51;AF=0.911;AN=56;BaseQRankSum=-1.634;DP=624;FS=1.013;HRun=11;HaplotypeScore=104.4293;InbreedingCoeff=0.8275;MQ=67.55;MQ0=1;MQRankSum=-4.962;QD=17.99;ReadPosRankSum=4.531;VQSLOD=4.9684;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,29:35:70.80:721,71,0	1/1:2,8:10:17.97:148,18,0	0/0:9,2:9:15:0,15,139	0/0:14,0:13:11.35:0,11,148	1/1:3,30:33:81.75:666,82,0	1/1:0,0:18:32.37:93,32,0	1/1:0,0:18:30.34:87,30,0	1/1:13,31:44:92.80:754,93,0	1/1:0,17:18:46.99:375,47,0	1/1:11,44:55:99:1021,101,0	1/1:3,32:35:89.87:738,90,0	1/1:3,13:16:26.94:221,27,0	1/1:2,18:20:47.94:394,48,0	1/1:3,13:16:38.94:320,39,0	1/1:2,24:26:65.91:541,66,0	1/1:3,17:21:46.97:375,47,0	1/1:5,23:28:62.90:517,63,0	1/1:0,14:14:26.96:222,27,0	1/1:5,14:18:32.88:266,33,0	1/1:2,25:27:71.91:591,72,0	1/1:2,15:18:40.99:326,41,0	1/1:1,10:11:26.93:217,27,0	1/1:3,12:15:35.95:295,36,0	1/1:2,25:27:71.91:591,72,0	0/1:2,10:12:1.50:192,0,1	1/1:7,22:29:62.85:514,63,0	1/1:3,22:25:50.93:418,51,0	1/1:1,8:9:20.97:172,21,0
chr10	46722074	.	A	AT	2392.83	PASS	AB=0.869;AC=45;AF=0.804;AN=56;BaseQRankSum=3.399;DP=620;FS=7.361;HRun=17;HaplotypeScore=121.8860;InbreedingCoeff=0.3594;MQ=53.56;MQ0=17;MQRankSum=-4.351;QD=4.54;ReadPosRankSum=-3.933;VQSLOD=-0.0235;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,11:25:22.63:155,23,0	1/1:5,1:8:5.68:28,6,0	0/0:50,0:15:13.90:0,14,67	0/1:37,0:10:8.30:10,0,8	1/1:22,0:32:40.07:224,40,0	0/1:15,1:19:0.31:38,0,0	1/1:14,2:26:2.66:60,3,0	1/1:34,0:36:44.80:248,45,0	1/1:3,5:10:10.52:56,11,0	1/1:33,1:44:51.02:248,51,0	1/1:24,2:40:36.10:189,36,0	1/1:10,4:14:3.21:89,3,0	1/1:13,0:11:18.95:101,19,0	1/1:8,1:8:8.71:53,9,0	1/1:12,5:19:10.13:198,10,0	1/1:12,0:17:22.36:135,22,0	1/1:14,0:13:1.04:43,1,0	1/1:12,1:14:9.63:58,10,0	0/0:20,0:18:20.75:0,21,110	0/1:25,2:30:33.26:33,0,89	0/1:6,1:9:10.19:10,0,29	1/1:16,0:17:2.66:66,3,0	0/1:8,0:14:4.57:101,0,5	1/1:10,3:15:14.75:99,15,0	1/1:13,1:22:21.99:109,22,0	1/1:23,0:24:22.38:140,22,0	0/0:20,0:23:34.06:0,34,200	1/1:7,0:9:12.27:59,12,0
chr10	46722718	.	TC	T	6965.58	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=10.804;DP=666;FS=4.352;HRun=1;HaplotypeScore=81.1328;InbreedingCoeff=0.9982;MQ=86.04;MQ0=0;MQRankSum=-0.651;QD=39.13;ReadPosRankSum=3.733;VQSLOD=5.5890;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,49:49:99:1989,144,0	0/0:10,0:10:30.10:0,30,462	0/0:28,0:25:69.21:0,69,1066	0/0:34,0:30:78.32:0,78,1118	0/0:28,0:28:78.26:0,78,1244	0/0:25,0:25:75.24:0,75,1175	0/0:24,0:24:72.21:0,72,1103	0/0:24,0:24:69.24:0,69,1102	1/1:0,16:16:48.15:655,48,0	0/0:47,0:47:99:0,138,2185	0/0:22,0:22:63.06:0,63,977	1/1:0,35:35:99:1385,99,0	1/1:0,39:39:99:1385,99,0	0/0:20,0:20:60.20:0,60,959	0/0:36,0:36:99:0,108,1676	0/0:28,0:28:84.29:0,84,1340	0/0:26,0:26:78.27:0,78,1244	0/0:21,0:21:63.21:0,63,1007	0/0:14,0:14:42.13:0,42,647	0/0:7,0:7:21.07:0,21,336	0/0:29,0:29:87.28:0,87,1365	1/1:0,10:10:27.09:378,27,0	1/1:0,8:8:20.94:293,21,0	1/1:0,21:21:63.21:881,63,0	0/0:13,0:13:35.86:0,36,575	0/0:26,0:26:78.27:0,78,1246	0/0:12,0:11:36.12:0,36,572	0/0:14,0:14:42.14:0,42,668
chr10	46724953	.	AC	A	15023.54	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-5.158;DP=664;FS=9.460;HRun=8;HaplotypeScore=91.0346;InbreedingCoeff=0.9429;MQ=75.91;MQ0=0;MQRankSum=-6.522;QD=23.81;ReadPosRankSum=5.583;VQSLOD=4.7133;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,33:35:77.10:878,77,0	1/1:0,5:5:8.96:87,9,0	0/0:19,0:19:26.09:0,26,277	0/0:14,0:14:10.85:0,11,173	1/1:1,20:21:59.97:565,60,0	1/1:1,19:20:57.05:541,57,0	1/1:2,19:21:54.08:521,54,0	1/1:10,24:33:65.68:587,66,0	1/1:1,16:17:48.08:463,48,0	1/1:8,45:53:99:1355,141,0	1/1:3,30:33:87.09:829,87,0	1/1:1,28:29:75.10:724,75,0	1/1:1,22:23:66.06:626,66,0	1/1:5,23:28:59.10:602,59,0	1/1:1,25:26:65.90:621,66,0	1/1:2,20:22:54.09:521,54,0	1/1:3,17:20:54.08:521,54,0	1/1:6,20:26:48.07:463,48,0	1/1:2,15:17:42.05:405,42,0	1/1:4,21:25:63.01:584,63,0	1/1:3,27:30:66.10:637,66,0	1/1:2,20:22:57.04:540,57,0	1/1:1,10:11:20.87:202,21,0	1/1:2,29:31:69.11:666,69,0	1/1:1,21:22:57.09:550,57,0	1/1:2,18:20:51.08:492,51,0	1/1:1,31:32:89.71:868,90,0	1/1:0,8:8:18.03:174,18,0
chr10	46727296	.	AGCC	A	31482.29	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-3.636;DP=698;FS=16.366;HRun=0;HaplotypeScore=124.2041;InbreedingCoeff=0.9977;MQ=74.33;MQ0=0;MQRankSum=-8.754;QD=47.34;ReadPosRankSum=6.652;VQSLOD=5.7025;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,39:39:96.33:1789,96,0	1/1:0,12:12:27.09:500,27,0	0/0:17,0:17:51.09:0,51,1103	0/0:16,0:16:27.08:0,27,709	1/1:0,22:22:54.19:1006,54,0	1/1:0,17:17:39.13:727,39,0	1/1:0,24:24:54.19:1006,54,0	1/1:0,32:32:93.30:1684,93,0	1/1:0,23:23:60.21:1114,60,0	1/1:0,54:54:99:2821,157,0	1/1:0,40:40:90.31:1677,90,0	1/1:0,27:27:75.26:1389,75,0	1/1:0,15:15:42.14:778,42,0	1/1:0,26:26:78.27:1449,78,0	1/1:0,20:20:57.20:1062,57,0	1/1:0,26:26:75.26:1389,75,0	1/1:0,26:26:60.68:1119,61,0	1/1:0,23:23:54.19:1003,54,0	1/1:1,24:25:49.21:1147,49,0	1/1:0,23:23:54.19:1006,54,0	1/1:0,34:34:78.74:1454,79,0	1/1:0,22:22:51.17:950,51,0	1/1:0,20:20:48.16:894,48,0	1/1:0,15:15:33.11:616,33,0	1/1:0,36:36:87.30:1621,87,0	1/1:0,31:31:93.32:1714,93,0	1/1:0,25:25:60.21:1118,60,0	1/1:0,8:8:24.08:447,24,0
chr10	46729302	.	CG	C	135	PASS	AC=2;AF=0.037;AN=54;BaseQRankSum=1.759;DP=365;FS=12.564;HRun=2;HaplotypeScore=56.9214;InbreedingCoeff=0.8091;MQ=91.68;MQ0=0;MQRankSum=-1.886;QD=12.27;ReadPosRankSum=-1.409;VQSLOD=0.5602;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:57.15:0,57,823	./.	0/0:30,0:30:80.40:0,80,1085	0/0:14,0:14:30.09:0,30,427	0/0:10,0:10:24.08:0,24,351	0/0:14,0:14:38.70:0,39,400	0/0:20,0:20:57.12:0,57,807	0/0:20,0:20:54.09:0,54,733	0/0:11,0:11:29.97:0,30,373	0/0:12,0:12:36.11:0,36,514	0/0:9,0:9:21:0,21,280	0/0:10,0:10:24.55:0,25,344	0/0:7,0:7:21.07:0,21,313	0/0:13,0:13:33.10:0,33,469	1/1:0,11:11:23.82:228,24,0	0/0:19,0:19:51.10:0,51,721	0/0:17,0:17:38.96:0,39,515	0/0:6,0:6:18.06:0,18,256	0/0:15,0:15:42.14:0,42,620	0/0:10,0:10:30.10:0,30,448	0/0:12,0:12:30.02:0,30,419	0/0:9,0:9:27.08:0,27,375	0/0:15,0:15:45.15:0,45,657	0/0:9,0:8:11.93:0,12,150	0/0:16,0:16:48.03:0,48,626	0/0:22,0:22:60.20:0,60,896	0/0:12,0:12:30.10:0,30,442	0/0:1,0:1:3.01:0,3,45
chr10	46729316	.	T	TTGGTTGTCAATGAAGGAGA	22853.27	PASS	AB=0.590;AC=52;AF=0.963;AN=54;BaseQRankSum=-2.200;DP=234;FS=7.152;HRun=0;HaplotypeScore=292.1920;InbreedingCoeff=-0.0778;MQ=79.93;MQ0=0;MQRankSum=-2.060;QD=97.66;ReadPosRankSum=0.117;VQSLOD=3.3121;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:18:41.14:1639,41,0	1/1:1,0:1:3.01:237,3,0	0/1:6,1:15:34.26:1548,0,34	0/1:1,0:5:9.53:537,0,10	1/1:6,0:6:2.93:242,3,0	1/1:6,0:6:10.59:512,11,0	1/1:15,0:15:32.88:1865,33,0	1/1:9,0:9:24.08:1172,24,0	1/1:6,0:6:13.93:727,14,0	1/1:11,0:11:33.11:1780,33,0	1/1:5,0:5:8.97:484,9,0	1/1:6,0:6:12.02:550,12,0	1/1:7,0:7:4.71:498,5,0	1/1:9,0:9:8.81:34,9,0	1/1:4,0:4:10.76:484,11,0	1/1:12,0:12:22.81:782,23,0	1/1:10,0:10:22.32:1463,22,0	1/1:4,0:4:9.03:595,9,0	1/1:8,0:8:15.05:688,15,0	1/1:7,0:7:20.28:688,20,0	1/1:9,0:9:21.03:847,21,0	1/1:6,0:6:13.29:459,13,0	1/1:13,0:13:30.91:1319,31,0	1/1:5,0:4:6.02:381,6,0	1/1:13,0:13:25.24:1002,25,0	1/1:16,0:16:22.20:1491,22,0	1/1:8,0:8:6.87:830,7,0	./.
chr10	46730899	.	T	TA	1225.97	PASS	AB=0.780;AC=22;AF=0.393;AN=56;BaseQRankSum=-3.855;DP=540;FS=2.349;HRun=15;HaplotypeScore=59.8164;InbreedingCoeff=0.2160;MQ=74.68;MQ0=2;MQRankSum=0.105;QD=4.07;ReadPosRankSum=-1.434;VQSLOD=0.5370;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,4:44:50.55:0,51,385	0/0:3,0:4:11.67:0,12,68	0/0:15,0:12:2.67:0,3,18	0/0:14,0:11:5.72:0,6,35	1/1:6,15:22:4.47:107,4,0	0/0:15,0:15:23.37:0,23,143	0/1:9,1:11:11.80:12,0,45	1/1:13,25:37:21.91:347,22,0	0/0:14,4:19:6.08:0,6,140	0/1:6,8:13:15.11:93,0,15	0/1:6,8:13:3.50:56,0,4	0/1:22,1:23:2.14:2,0,101	0/0:24,0:25:0.31:0,0,99	1/1:6,21:28:20.99:142,21,0	0/1:19,2:21:8.83:9,0,83	1/1:3,12:16:11.15:120,11,0	0/1:7,7:15:36.21:47,0,36	0/1:4,8:12:14.06:105,0,14	0/1:18,4:23:54.52:55,0,153	0/0:19,0:22:24.19:0,24,134	0/1:11,0:11:7.48:7,0,57	0/0:21,0:21:21.96:0,22,154	0/0:18,1:19:25.25:0,25,153	0/0:14,0:16:14:0,14,135	1/1:10,10:20:5.99:51,6,0	1/1:9,10:20:5.79:150,6,0	0/0:24,1:25:11.87:0,12,177	0/1:5,6:12:0.19:97,0,0
chr10	46731096	.	T	TA	5939.76	PASS	AB=0.600;AC=29;AF=0.518;AN=56;BaseQRankSum=-0.094;DP=647;FS=0.654;HRun=9;HaplotypeScore=74.9935;InbreedingCoeff=0.9145;MQ=57.72;MQ0=12;MQRankSum=0.248;QD=17.73;ReadPosRankSum=2.395;VQSLOD=5.1429;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,0:27:59.94:317,60,0	1/1:1,10:11:27.07:299,27,0	0/0:14,0:8:23.98:0,24,206	0/0:13,0:7:17.65:0,18,137	0/0:28,0:28:80.97:0,81,699	1/1:6,21:27:8.08:545,8,0	1/1:3,11:13:24.06:265,24,0	0/0:37,0:35:95.93:0,96,825	1/1:2,0:22:51.13:255,51,0	0/0:30,0:30:86.97:0,87,751	0/0:27,0:27:77.95:0,78,671	1/1:3,1:14:25.57:137,26,0	1/1:2,0:23:53.97:270,54,0	0/0:24,0:24:62.96:0,63,543	1/1:5,27:32:58.06:839,58,0	0/0:28,0:28:74.92:0,75,640	0/0:28,0:28:74.02:0,74,631	0/0:13,0:13:38.99:0,39,339	1/1:5,22:24:37.12:637,37,0	1/1:5,31:35:78.17:849,78,0	0/1:8,16:24:26.98:413,0,27	1/1:4,0:12:19.99:104,20,0	1/1:3,1:18:25.57:128,26,0	1/1:1,0:18:34.09:170,34,0	0/0:30,0:30:55.34:0,55,628	0/0:31,1:32:53.78:0,54,693	1/1:4,26:30:23.13:710,23,0	0/0:7,0:7:17.99:0,18,156
chr10	46731283	.	G	GCATGGTCCGTTCA	80877.34	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-2.581;DP=762;FS=0.000;HRun=0;HaplotypeScore=271.9488;InbreedingCoeff=0.9944;MQ=74.63;MQ0=0;MQRankSum=-14.078;QD=119.82;ReadPosRankSum=2.112;VQSLOD=4.0570;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:24,16:44:99:5053,99,0	1/1:5,4:10:27.09:1507,27,0	0/0:20,0:20:57.19:0,57,1928	0/0:30,0:30:72.59:0,73,2480	1/1:13,0:19:24.04:776,24,0	0/0:14,0:14:39.13:0,39,1546	0/0:23,0:23:66.23:0,66,2571	1/1:34,0:44:99:5601,120,0	1/1:11,13:25:69.24:4213,69,0	1/1:12,0:25:57.17:2645,57,0	1/1:8,0:12:15.05:553,15,0	1/1:14,16:32:84.03:5111,84,0	1/1:20,18:43:99:6824,114,0	1/1:16,0:43:99:6187,111,0	1/1:10,17:32:81.28:5047,81,0	1/1:7,0:18:54.18:2640,54,0	1/1:10,0:26:60.20:3193,60,0	1/1:11,0:19:45.15:2110,45,0	1/1:18,7:27:66.20:3321,66,0	1/1:7,9:20:54.18:2763,54,0	1/1:40,7:56:84.28:4085,84,0	1/1:7,8:18:45.62:2413,46,0	1/1:12,5:20:45.15:1987,45,0	1/1:20,12:38:63.21:3085,63,0	1/1:12,0:25:51.17:2368,51,0	1/1:14,0:33:78.25:3789,78,0	1/1:18,10:30:75.26:4027,75,0	1/1:3,0:12:27.09:1580,27,0
chr10	46731873	.	CGGGGGGGGGGG	C	25635.75	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-1.789;DP=661;FS=2.547;HRun=18;HaplotypeScore=232.6383;InbreedingCoeff=0.9231;MQ=60.59;MQ0=1;MQRankSum=-4.289;QD=43.45;ReadPosRankSum=6.434;VQSLOD=0.8172;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,22:26:42.01:1221,42,0	1/1:6,0:18:21.78:307,22,0	0/0:18,0:13:20.32:0,20,687	0/0:16,0:11:14.86:0,15,210	1/1:3,8:11:14.88:302,15,0	0/0:15,0:16:12.67:0,13,148	0/0:15,0:21:22.69:0,23,236	1/1:7,8:15:20.63:349,21,0	1/1:6,38:44:96.14:2793,96,0	1/1:6,26:32:77.85:1946,78,0	1/1:3,13:16:18.40:453,18,0	1/1:6,40:46:87.10:2538,87,0	1/1:4,30:34:84.18:2448,84,0	1/1:6,30:36:84.16:2434,84,0	1/1:2,0:38:48.78:1027,49,0	1/1:3,17:20:36.02:1047,36,0	1/1:3,15:18:26.98:753,27,0	1/1:2,16:18:27.05:788,27,0	1/1:9,8:17:32.94:860,33,0	1/1:6,14:20:17.63:523,18,0	1/1:12,36:48:27.09:729,27,0	1/1:5,17:22:23.03:698,23,0	1/1:2,14:16:18:525,18,0	1/1:7,19:26:26.91:718,27,0	1/1:3,12:15:21.03:572,21,0	1/1:9,12:21:35.66:948,36,0	1/1:7,25:32:53.83:1572,54,0	1/1:0,1:1:3.01:87,3,0
chr10	46731881	.	GGGGGGGGGGGA	G	20372.16	PASS	AB=1.000;AC=45;AF=0.804;AN=56;BaseQRankSum=5.171;DP=559;FS=10.748;HRun=0;HaplotypeScore=216.4063;InbreedingCoeff=0.5482;MQ=58.36;MQ0=1;MQRankSum=-6.779;QD=42.18;ReadPosRankSum=10.671;VQSLOD=2.2513;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:23:26.13:951,26,0	1/1:12,0:12:21.95:271,22,0	0/0:24,0:15:42.07:0,42,1038	0/0:15,0:9:7.37:0,7,291	1/1:8,0:8:10.80:214,11,0	0/0:11,0:11:26.46:0,26,336	0/0:26,0:26:52.60:0,53,901	0/1:8,0:8:11.11:186,0,11	1/1:38,1:39:96.33:2294,96,0	1/1:26,0:26:63.20:1415,63,0	1/1:13,0:13:1.73:375,2,0	1/1:40,0:40:87.30:2060,87,0	1/1:30,2:32:73.26:2015,73,0	1/1:30,3:33:84.29:1997,84,0	1/1:36,0:36:72.24:953,72,0	1/1:17,0:17:36.12:827,36,0	1/1:15,0:15:27.09:597,27,0	1/1:16,0:16:27.09:614,27,0	1/1:13,0:13:29.24:608,29,0	0/1:14,0:14:31.99:388,0,32	1/1:37,0:37:12.32:553,12,0	0/1:17,0:17:6.52:542,0,7	1/1:14,0:14:0.94:409,1,0	1/1:19,0:19:27.05:572,27,0	1/1:12,1:13:20.98:489,21,0	1/1:12,0:12:32.86:731,33,0	1/1:25,0:25:54.19:1244,54,0	1/1:1,0:1:3.01:67,3,0
chr10	46731885	.	GGGGGGGA	G	7917.72	PASS	AB=0.985;AC=34;AF=0.607;AN=56;BaseQRankSum=14.398;DP=621;FS=0.402;HRun=0;HaplotypeScore=239.0409;InbreedingCoeff=-0.3363;MQ=55.88;MQ0=1;MQRankSum=-8.215;QD=13.56;ReadPosRankSum=14.764;VQSLOD=0.9992;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:26:26.68:322,0,27	0/1:14,0:14:22.13:157,0,22	0/0:23,0:14:34.83:0,35,536	0/0:14,0:8:12.98:0,13,167	0/1:9,0:9:20.91:68,0,21	0/1:11,2:13:64.56:65,0,175	0/1:22,4:26:99:255,0,247	0/1:13,0:13:44.05:44,0,115	1/1:44,0:44:25.24:850,25,0	0/1:28,0:28:26.32:442,0,26	0/1:16,0:16:18.49:147,0,18	1/1:41,0:41:87.09:830,87,0	1/1:35,0:35:7.73:752,8,0	1/1:34,0:34:69.09:791,69,0	0/1:40,0:40:8.30:637,0,8	1/1:18,0:18:20.03:298,20,0	1/1:16,0:16:3.04:196,3,0	0/1:19,0:19:28.75:197,0,29	0/1:15,0:15:51.07:172,0,51	0/1:14,0:14:31.85:133,0,32	0/1:51,0:51:99:169,0,119	0/1:17,0:17:6.30:203,0,6	1/1:14,0:14:0.98:155,1,0	0/1:21,0:21:9.40:177,0,9	0/1:16,0:16:3.10:177,0,3	0/1:15,0:15:0.12:230,0,0	1/1:27,0:27:10.42:431,10,0	0/1:2,0:2:18.21:18,0,19
chr10	46734982	.	T	TG	5909.11	PASS	AB=1.000;AC=53;AF=0.946;AN=56;BaseQRankSum=-1.109;DP=439;FS=3.791;HRun=2;HaplotypeScore=81.7308;InbreedingCoeff=0.6557;MQ=65.85;MQ0=14;MQRankSum=-1.732;QD=14.27;ReadPosRankSum=1.452;VQSLOD=4.4911;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:20:46.51:323,47,0	1/1:9,0:9:22.71:140,23,0	0/0:25,0:8:23.89:0,24,194	0/1:19,0:11:5.46:5,0,61	1/1:20,0:20:49.63:299,50,0	1/1:9,0:9:17.78:140,18,0	1/1:15,0:14:34.61:247,35,0	1/1:16,0:15:29.82:242,30,0	1/1:14,0:12:29.60:227,30,0	1/1:26,0:25:56.53:418,57,0	1/1:16,0:16:43.46:293,43,0	1/1:20,0:20:41.70:314,42,0	1/1:10,0:10:13.43:128,13,0	1/1:6,0:6:11.67:89,12,0	1/1:18,0:18:27.67:208,28,0	1/1:17,0:17:47.48:282,47,0	1/1:25,0:24:60.79:379,61,0	1/1:15,0:14:26.67:193,27,0	1/1:13,0:12:18.88:185,19,0	1/1:8,13:21:34.68:204,35,0	1/1:10,0:10:17.67:121,18,0	1/1:8,0:7:11.70:81,12,0	1/1:8,0:8:11.95:95,12,0	1/1:12,0:11:17.32:118,17,0	1/1:11,0:11:25.54:169,26,0	1/1:27,1:26:71.82:535,72,0	1/1:23,0:22:49.99:394,50,0	1/1:4,0:4:11.54:79,12,0
chr10	46736148	.	AAAGG	A	3516.90	PASS	AB=0.844;AC=14;AF=0.269;AN=52;BaseQRankSum=9.455;DP=603;FS=16.632;HRun=0;HaplotypeScore=99.3866;InbreedingCoeff=0.7567;MQ=65.25;MQ0=4;MQRankSum=-0.748;QD=18.32;ReadPosRankSum=1.004;VQSLOD=2.3748;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:12,16:28:39.13:599,39,0	0/0:9,0:9:21.07:0,21,467	./.	./.	0/0:25,0:25:36.12:0,36,804	0/0:8,0:14:12.04:0,12,206	0/0:13,0:16:3.01:0,3,52	0/0:21,0:20:3.01:0,3,40	0/0:28,0:28:45.14:0,45,964	0/0:31,0:31:51.17:0,51,1120	0/0:15,0:15:24.08:0,24,535	0/0:21,0:21:54.19:0,54,1248	0/0:20,0:20:27.09:0,27,603	1/1:12,16:28:45.15:692,45,0	0/0:23,0:22:36.12:0,36,829	0/0:4,0:12:18.06:0,18,288	0/0:35,0:35:63.18:0,63,1366	0/0:19,0:19:24.06:0,24,494	1/1:13,5:18:15.05:224,15,0	1/1:11,10:21:33.07:468,33,0	0/1:18,11:29:33.90:471,0,34	0/0:23,0:23:27.09:0,27,615	0/0:17,0:17:39.13:0,39,813	0/1:25,1:26:3.50:3,0,854	1/1:4,13:17:33.11:507,33,0	0/0:29,0:29:54.19:0,54,1218	1/1:8,17:25:36.12:553,36,0	0/0:6,0:6:12.04:0,12,267
chr10	46736860	.	ATTTTGTTTTG	A	24576.72	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=1.775;DP=623;FS=14.083;HRun=0;HaplotypeScore=186.3602;InbreedingCoeff=0.8535;MQ=58.13;MQ0=6;MQRankSum=-3.702;QD=44.20;ReadPosRankSum=6.424;VQSLOD=3.3557;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,28:33:47.26:1121,47,0	1/1:1,8:9:21.07:586,21,0	0/0:31,0:23:23.98:0,24,1308	0/0:35,0:20:35.55:0,36,861	1/1:7,10:17:18.06:472,18,0	1/1:2,20:22:51.17:1565,51,0	1/1:8,18:26:32.78:908,33,0	1/1:14,16:30:48.14:970,48,0	1/1:3,14:17:36.12:1063,36,0	1/1:6,18:24:51.17:1430,51,0	1/1:4,11:15:27.09:746,27,0	1/1:4,23:27:51.11:1542,51,0	1/1:8,21:29:45.15:1381,45,0	1/1:3,20:23:30.10:920,30,0	1/1:3,27:30:66.23:2023,66,0	1/1:4,25:29:53.82:1656,54,0	1/1:11,11:22:11.71:287,12,0	1/1:4,10:14:12.04:323,12,0	1/1:6,8:14:24.08:519,24,0	1/1:6,13:19:36.12:972,36,0	1/1:10,12:20:21.07:585,21,0	1/1:6,7:13:15.05:420,15,0	1/1:3,8:11:11.90:312,12,0	1/1:9,20:29:16.35:549,16,0	1/1:2,12:14:21.07:605,21,0	1/1:4,25:29:69.23:1806,69,0	1/1:8,25:33:57.16:1723,57,0	1/1:3,2:5:3.01:92,3,0
chr10	46737133	.	CCACACACACACACA	C	3039.39	PASS	AB=0.879;AC=14;AF=0.250;AN=56;BaseQRankSum=7.287;DP=578;FS=0.787;HRun=0;HaplotypeScore=201.0015;InbreedingCoeff=0.6192;MQ=60.47;MQ0=8;MQRankSum=-4.960;QD=17.77;ReadPosRankSum=1.682;VQSLOD=2.5365;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:24,10:35:11.15:407,11,0	0/0:12,0:12:16.30:0,16,718	0/0:32,0:23:15.05:0,15,433	0/0:26,0:23:12.02:0,12,275	0/0:16,0:15:6.02:0,6,296	0/0:20,0:17:12.49:0,12,465	0/0:25,0:24:21.04:0,21,897	0/0:25,0:24:22.63:0,23,1006	1/1:9,8:18:27.09:1021,27,0	0/0:22,0:21:39.50:0,40,2032	0/0:19,0:19:2.99:0,3,24	1/1:6,10:15:15.05:588,15,0	1/1:11,7:18:18.06:648,18,0	0/0:24,0:23:21.34:0,21,1130	0/0:15,0:17:15.52:0,16,908	0/1:26,1:27:99:106,0,434	0/0:16,0:19:20.53:0,21,803	0/0:11,0:11:15.01:0,15,613	0/0:21,0:20:12.49:0,12,523	0/0:15,0:15:12.51:0,13,724	0/0:22,0:20:6.02:0,6,340	1/1:15,0:17:0.88:2,1,0	1/1:7,10:17:2.95:117,3,0	0/1:17,5:22:99:318,0,267	0/0:18,0:20:11.86:0,12,422	0/0:27,0:28:63.22:0,63,3544	0/0:20,0:21:21.54:0,22,1197	0/0:9,0:9:15.52:0,16,787
chr10	46738237	.	C	CATATAAA	10638.64	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-7.561;DP=668;FS=3.588;HRun=0;HaplotypeScore=147.3797;InbreedingCoeff=0.9985;MQ=80.45;MQ0=1;MQRankSum=-15.179;QD=71.40;ReadPosRankSum=-0.766;VQSLOD=5.1741;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:9,24:35:60.35:2249,60,0	0/0:9,0:9:24.08:0,24,559	0/0:24,0:24:57.17:0,57,1234	0/0:16,0:16:24.08:0,24,561	0/0:23,0:23:60.21:0,60,1463	0/0:19,0:19:54.18:0,54,1254	0/0:26,0:26:78.26:0,78,1854	0/0:34,0:34:84.28:0,84,1795	1/1:7,16:23:45.07:1537,45,0	0/0:38,0:38:81.28:0,81,1899	0/0:25,0:25:75.24:0,75,1735	1/1:1,15:16:39.13:1500,39,0	1/1:5,13:18:39.13:1499,39,0	0/0:22,0:22:63.22:0,63,1490	0/0:40,0:40:99:0,111,2498	0/0:31,0:31:90.31:0,90,2197	0/0:32,0:32:87.27:0,87,2099	0/0:16,0:16:36.12:0,36,883	0/0:23,0:23:57.13:0,57,1229	0/0:15,0:15:45.15:0,45,1093	0/0:38,0:37:99:0,99,2380	1/1:5,7:13:27.05:935,27,0	1/1:7,17:27:55.13:2064,55,0	1/1:7,10:17:24.08:855,24,0	0/0:21,0:21:63.19:0,63,1462	0/0:32,0:32:81.28:0,81,1979	0/0:23,0:22:69.21:0,69,1589	0/0:12,0:12:27.09:0,27,550
chr10	46738922	.	G	GT	4732.01	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-3.230;DP=634;FS=20.866;HRun=6;HaplotypeScore=94.3811;InbreedingCoeff=0.9996;MQ=73.44;MQ0=0;MQRankSum=-1.249;QD=30.73;ReadPosRankSum=4.022;VQSLOD=3.2174;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,33:38:93.30:1170,93,0	0/0:11,0:11:27.04:0,27,269	0/0:25,0:25:60.10:0,60,595	0/0:23,0:23:53.93:0,54,521	0/0:27,0:27:72.11:0,72,717	0/0:19,0:19:48.11:0,48,490	0/0:32,0:32:87.05:0,87,846	0/0:42,0:42:99:0,108,1059	1/1:2,25:27:69.22:868,69,0	0/0:21,0:21:60.13:0,60,612	0/0:25,0:25:69.13:0,69,693	1/1:4,17:21:51.16:642,51,0	1/1:1,13:14:30.08:377,30,0	0/0:18,0:18:45.10:0,45,459	0/0:23,0:23:60.10:0,60,598	0/0:24,0:24:66.15:0,66,673	0/0:26,0:26:69.16:0,69,704	0/0:21,0:21:57.09:0,57,570	0/0:29,0:29:69:0,69,678	0/0:25,0:25:72.15:0,72,728	0/0:22,0:22:54.09:0,54,538	1/1:2,14:16:42.11:505,42,0	1/1:1,12:13:36.12:453,36,0	1/1:5,20:25:57.18:717,57,0	0/0:14,0:14:35.96:0,36,344	0/0:25,0:25:72.14:0,72,722	0/0:17,0:17:45.10:0,45,459	0/0:11,0:11:33.08:0,33,336
chr10	46739449	.	A	AACAT	8499.38	PASS	AB=0.679;AC=47;AF=0.839;AN=56;BaseQRankSum=-2.067;DP=524;FS=1.094;HRun=0;HaplotypeScore=91.8339;InbreedingCoeff=0.1767;MQ=62.72;MQ0=1;MQRankSum=0.563;QD=17.63;ReadPosRankSum=0.815;VQSLOD=4.4231;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:34:12.02:169,12,0	1/1:2,0:5:6.02:105,6,0	0/0:19,0:14:5.17:0,5,84	0/0:23,0:23:17.91:0,18,199	0/1:8,9:17:23.48:373,0,23	1/1:14,0:22:18.06:308,18,0	1/1:17,0:20:10.33:118,10,0	1/1:30,0:28:45.06:535,45,0	1/1:5,0:14:9.01:129,9,0	0/1:7,5:13:26.98:296,0,27	1/1:4,5:10:12.04:218,12,0	1/1:9,0:19:15.05:261,15,0	1/1:6,0:11:12.03:209,12,0	1/1:4,5:9:6.02:144,6,0	1/1:11,0:29:24.08:418,24,0	0/1:13,5:19:32.99:263,0,33	0/1:10,12:21:52.12:270,0,52	0/1:10,10:20:26.96:411,0,27	1/1:12,9:21:26.97:480,27,0	1/1:3,4:8:9.03:183,9,0	1/1:16,13:32:27.08:622,27,0	1/1:1,0:8:6.02:104,6,0	1/1:7,0:11:3:29,3,0	1/1:15,0:29:3.48:53,3,0	1/1:10,11:21:30.10:703,30,0	1/1:6,18:25:54.17:1130,54,0	1/1:3,19:21:30.57:721,31,0	1/1:7,0:7:15.05:246,15,0
chr10	46739634	.	CAAA	C	3163.40	PASS	AB=0.992;AC=28;AF=0.519;AN=54;BaseQRankSum=-6.114;DP=352;FS=19.195;HRun=20;HaplotypeScore=60.4398;InbreedingCoeff=0.1244;MQ=54.69;MQ0=16;MQRankSum=4.990;QD=14.44;ReadPosRankSum=-0.712;VQSLOD=-0.1468;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:18:12.17:0,12,151	1/1:3,1:4:12.03:158,12,0	0/0:35,0:8:8.05:0,8,218	0/0:21,0:7:20.12:0,20,214	0/0:10,0:7:4.25:0,4,11	1/1:11,2:12:30.02:369,30,0	1/1:1,12:13:24.07:300,24,0	0/1:32,0:30:48.32:601,0,48	0/1:11,0:10:99:162,0,152	0/1:10,1:10:84.71:133,0,85	1/1:9,0:8:6.64:249,7,0	0/1:7,0:7:3.21:3,0,43	0/1:9,0:8:99:110,0,152	1/1:5,0:3:2.05:86,2,0	1/1:11,2:13:8.15:112,8,0	0/1:12,0:11:99:247,0,130	0/1:28,0:24:99:178,0,179	0/1:11,0:9:99:139,0,133	0/0:14,0:13:29.88:0,30,361	0/0:8,0:8:14.95:0,15,167	./.	1/1:6,0:4:8.14:57,8,0	0/1:10,0:9:8.70:163,0,9	1/1:8,0:7:0.67:44,1,0	0/1:4,0:3:16.12:16,0,27	1/1:13,0:11:11.80:211,12,0	0/0:15,0:10:10.48:0,10,136	0/0:10,0:9:3.76:0,4,147
chr10	46739637	.	A	AC	2103.13	PASS	AB=0.922;AC=36;AF=0.667;AN=54;BaseQRankSum=0.962;DP=361;FS=43.592;HRun=0;HaplotypeScore=56.9778;InbreedingCoeff=0.0724;MQ=57.53;MQ0=14;MQRankSum=2.528;QD=7.03;ReadPosRankSum=3.074;VQSLOD=1.4908;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:9,10:18:12.52:13,0,79	1/1:4,0:4:11.43:74,11,0	0/1:34,0:10:14.26:14,0,142	0/0:21,0:7:18.14:0,18,183	1/1:8,0:6:7.43:45,7,0	1/1:13,0:12:28.65:169,29,0	1/1:13,0:13:11.38:67,11,0	1/1:32,0:30:19.47:487,19,0	0/1:12,0:11:49.27:91,0,49	1/1:11,0:10:0.39:121,0,0	1/1:9,0:8:6.22:107,6,0	0/1:2,6:8:16.95:27,0,17	0/1:10,0:9:55.67:57,0,56	1/1:6,0:4:8.88:58,9,0	1/1:2,11:13:5.52:38,6,0	0/1:13,0:12:48.33:97,0,48	0/1:26,0:23:57.21:154,0,57	0/1:13,0:11:63.85:131,0,64	0/0:16,0:16:39.63:0,40,302	0/0:8,0:8:23.90:0,24,192	./.	1/1:5,1:4:11.96:113,12,0	1/1:10,0:9:11.40:168,11,0	1/1:8,0:7:2.08:30,2,0	0/1:7,0:6:9.02:26,0,9	1/1:12,0:10:17.96:158,18,0	0/0:17,0:12:29.85:0,30,231	0/1:11,0:10:31.99:32,0,60
chr10	46739956	.	T	TCTTAA	2525.62	PASS	AC=26;AF=1.000;AN=26;DP=47;FS=0.000;HRun=0;HaplotypeScore=30.9942;InbreedingCoeff=0.0100;MQ=23.38;MQ0=11;QD=63.14;VQSLOD=3.2253;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,4:3:9.03:295,9,0	./.	./.	./.	./.	1/1:1,1:1:1.25:3,1,0	./.	./.	1/1:0,0:1:3.01:92,3,0	1/1:0,0:1:3.01:75,3,0	./.	1/1:0,2:1:3.01:100,3,0	./.	./.	./.	1/1:1,1:1:3.01:100,3,0	1/1:2,2:3:6.02:194,6,0	1/1:0,3:1:3.01:100,3,0	1/1:1,2:2:6.02:199,6,0	./.	./.	./.	./.	./.	1/1:2,4:5:15.05:476,15,0	1/1:1,1:1:3.01:100,3,0	1/1:0,4:4:12.04:398,12,0	1/1:0,4:5:15.05:467,15,0
chr10	46749119	.	AAAAAG	A	1519.40	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=-3.163;DP=452;FS=5.347;HRun=0;HaplotypeScore=96.1869;InbreedingCoeff=0.2396;MQ=52.18;MQ0=23;MQRankSum=-4.302;QD=5.55;ReadPosRankSum=-6.070;VQSLOD=-0.4866;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:16:30.75:303,31,0	0/0:6,0:6:14.73:0,15,258	0/1:13,0:9:6.75:7,0,122	0/0:12,0:7:13.19:0,13,106	0/1:17,0:17:42.82:43,0,288	0/0:15,0:14:14.12:0,14,233	0/0:27,0:24:31.84:0,32,546	0/1:37,0:36:11.55:12,0,798	1/1:9,1:9:20.77:241,21,0	0/1:16,0:14:11.50:11,0,314	0/0:11,0:11:0.85:0,1,178	1/1:7,3:10:26.30:314,26,0	1/1:3,12:15:6.49:123,6,0	0/1:17,0:16:46.24:46,0,285	0/0:13,0:12:23.36:0,23,531	0/1:15,0:13:6.16:6,0,234	0/1:33,0:32:7.54:8,0,538	0/0:16,0:12:9.88:0,10,332	0/0:25,0:25:32.22:0,32,1042	0/0:9,0:8:2.90:0,3,184	0/0:8,0:6:8.20:0,8,230	1/1:3,7:10:11.44:167,11,0	1/1:10,3:12:8.23:260,8,0	1/1:2,14:14:2.44:61,2,0	0/1:19,0:19:77.21:77,0,324	0/0:20,0:20:22.09:0,22,524	0/0:16,0:14:14.94:0,15,306	0/1:15,0:14:23.26:23,0,216
chr10	46749120	.	AAAAG	A	1484.53	PASS	AB=1.000;AC=26;AF=0.464;AN=56;BaseQRankSum=-2.018;DP=453;FS=2.064;HRun=0;HaplotypeScore=90.2239;InbreedingCoeff=0.0925;MQ=52.61;MQ0=19;MQRankSum=-1.600;QD=4.68;ReadPosRankSum=-7.826;VQSLOD=0.0547;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:16,1:15:28.89:220,29,0	0/0:6,0:6:14.68:0,15,218	0/0:13,0:9:10.92:0,11,137	0/0:12,0:7:13.05:0,13,121	0/1:18,0:18:75.26:75,0,179	0/0:16,0:15:14.81:0,15,205	0/0:26,0:23:22.61:0,23,445	0/1:37,0:36:53.79:54,0,522	1/1:8,0:8:20.94:215,21,0	0/1:16,0:14:30.76:31,0,202	0/1:11,0:11:3.67:4,0,88	1/1:10,0:10:28.81:262,29,0	1/1:14,1:15:8.94:106,9,0	0/1:18,0:17:41.28:41,0,164	0/0:12,0:12:22.59:0,23,440	0/1:14,0:13:42.76:43,0,151	0/1:35,0:34:49.06:49,0,311	0/1:15,0:12:9.09:9,0,198	0/0:25,1:26:37.51:0,38,803	0/1:9,0:8:21.91:22,0,131	0/0:7,1:6:7.19:0,7,190	1/1:9,1:10:11.25:167,11,0	1/1:13,0:12:2.81:205,3,0	1/1:16,0:14:2.61:44,3,0	0/1:19,0:19:91.73:92,0,189	0/1:21,0:21:3.17:3,0,291	0/0:17,0:15:14.91:0,15,252	0/1:15,0:14:24.17:24,0,119
chr10	46749121	.	AAAG	A	1618.12	PASS	AB=0.992;AC=28;AF=0.500;AN=56;BaseQRankSum=-2.509;DP=452;FS=4.823;HRun=0;HaplotypeScore=83.6453;InbreedingCoeff=-0.0425;MQ=53.18;MQ0=18;MQRankSum=-1.474;QD=4.82;ReadPosRankSum=-7.687;VQSLOD=-0.4834;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:16,1:15:29.05:210,29,0	0/0:6,0:6:14.55:0,15,165	0/0:13,0:9:2.99:0,3,107	0/1:13,0:8:11.77:12,0,109	0/1:18,0:18:72.23:108,0,72	0/0:16,0:15:12.48:0,12,175	0/0:26,0:23:32.82:0,33,393	0/1:37,0:36:81.11:81,0,243	1/1:7,1:8:22.47:196,22,0	0/1:15,1:14:56.16:56,0,83	0/1:11,0:11:18.12:18,0,18	1/1:10,0:10:29.11:246,29,0	1/1:15,0:15:8.94:95,9,0	0/1:18,0:17:44.18:55,0,44	0/0:11,0:11:21.29:0,21,359	0/1:14,0:13:45.76:46,0,78	0/1:35,0:34:68.25:68,0,134	0/1:14,0:12:16.28:16,0,71	0/0:27,0:27:28.56:0,29,705	0/1:9,0:8:7.31:7,0,105	0/1:7,0:6:1.31:1,0,144	1/1:9,1:10:10.77:161,11,0	1/1:13,0:12:4.86:194,5,0	1/1:16,0:14:2.82:39,3,0	0/1:17,1:18:81.01:88,0,81	0/1:22,0:22:39.21:39,0,105	0/0:17,0:15:12.27:0,12,198	0/1:15,0:14:37.55:59,0,38
chr10	46749123	.	AG	A	3542.99	PASS	AB=0.968;AC=41;AF=0.732;AN=56;BaseQRankSum=2.493;DP=449;FS=15.394;HRun=1;HaplotypeScore=67.0086;InbreedingCoeff=0.5325;MQ=53.55;MQ0=17;MQRankSum=-4.614;QD=9.55;ReadPosRankSum=-0.084;VQSLOD=-0.1909;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:17,1:16:22.42:183,22,0	0/1:6,0:6:2.26:2,0,43	0/1:14,0:9:1.69:2,0,61	0/1:12,2:8:24.92:25,0,46	1/1:18,0:18:22.41:217,22,0	0/0:15,0:14:17.32:0,17,102	0/0:24,0:22:32.29:0,32,216	1/1:32,3:34:67.49:367,67,0	1/1:8,0:8:12.62:139,13,0	1/1:15,1:14:34.43:222,34,0	1/1:11,0:11:24.73:180,25,0	1/1:10,0:10:18.94:197,19,0	1/1:14,1:15:8.93:70,9,0	1/1:16,1:16:31.67:194,32,0	0/0:12,0:12:15.69:0,16,181	1/1:12,1:12:18.47:110,18,0	1/1:34,1:34:66.42:411,66,0	1/1:14,0:12:28.69:186,29,0	0/1:26,1:27:21.09:21,0,331	0/0:9,0:8:0.10:0,0,43	0/1:7,0:6:6.06:6,0,80	1/1:10,0:10:9.32:113,9,0	1/1:13,0:12:20.02:194,20,0	1/1:15,0:13:2.74:27,3,0	1/1:18,0:18:36.13:204,36,0	1/1:22,0:22:47.61:298,48,0	0/0:18,0:16:8.74:0,9,106	1/1:15,0:14:28.55:173,29,0
chr10	46749124	.	G	GA	1104.90	PASS	AB=0.964;AC=40;AF=0.714;AN=56;BaseQRankSum=-2.497;DP=461;FS=0.000;HRun=15;HaplotypeScore=86.5917;InbreedingCoeff=0.3339;MQ=53.23;MQ0=17;MQRankSum=-3.746;QD=2.86;ReadPosRankSum=-2.101;VQSLOD=-0.2945;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:19,1:18:11.03:78,11,0	0/1:5,1:6:22.22:41,0,22	0/1:14,0:9:4.18:4,0,46	0/0:15,0:8:6.13:0,6,54	1/1:18,0:18:10.95:53,11,0	1/1:7,8:14:11.99:101,12,0	1/1:7,15:21:5.80:147,6,0	1/1:35,0:34:4.73:16,5,0	0/0:7,1:8:2.93:0,3,7	1/1:16,0:14:2.50:24,3,0	1/1:11,0:11:5.96:28,6,0	1/1:11,1:12:15.24:81,15,0	0/0:15,0:15:2.31:0,2,5	1/1:18,0:17:5.58:28,6,0	0/0:14,0:14:12.55:0,13,85	1/1:13,0:12:3.62:14,4,0	1/1:36,0:35:15.25:97,15,0	1/1:15,0:13:7.33:58,7,0	1/1:23,1:28:28.29:222,28,0	1/1:8,0:8:6.57:30,7,0	0/0:7,0:6:1.72:0,2,16	0/1:10,0:10:10.02:10,0,20	0/1:13,0:12:8.79:50,0,9	0/0:15,0:13:1.04:0,1,3	1/1:18,0:18:7.50:33,8,0	1/1:21,0:21:11.62:67,12,0	1/1:10,1:18:6.63:43,7,0	1/1:15,0:14:10.67:30,11,0
chr10	46753900	.	TAC	T	1161.49	PASS	AB=0.857;AC=29;AF=0.580;AN=50;BaseQRankSum=0.120;DP=462;FS=7.218;HRun=0;HaplotypeScore=62.7838;InbreedingCoeff=0.3490;MQ=67.37;MQ0=13;MQRankSum=0.593;QD=4.38;ReadPosRankSum=2.100;VQSLOD=1.1558;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:27:26.19:26,0,76	1/1:4,0:4:3.01:32,3,0	./.	./.	1/1:9,4:13:11.92:102,12,0	0/0:18,0:21:19.25:0,19,170	0/0:24,0:30:26.99:0,27,233	./.	0/0:13,0:13:15.05:0,15,212	1/1:30,2:32:1.79:100,2,0	1/1:7,1:9:6:56,6,0	0/0:8,0:8:8.90:0,9,63	0/0:11,1:12:8.95:0,9,86	1/1:10,3:15:14.57:124,15,0	0/1:10,2:12:20.11:20,0,120	1/1:12,6:17:6.02:64,6,0	0/1:16,4:21:8.22:145,0,8	0/1:12,2:15:27.14:114,0,27	1/1:15,0:15:5.50:41,6,0	1/1:12,1:13:11.82:95,12,0	1/1:21,5:26:3.01:32,3,0	0/0:13,0:12:3.01:0,3,38	0/0:9,0:9:2.98:0,3,39	0/0:21,0:20:9.01:0,9,112	1/1:5,0:6:5.58:32,6,0	1/1:14,0:14:14.14:99,14,0	1/1:5,6:11:18.05:193,18,0	0/1:11,3:13:35.12:55,0,35
chr10	46753995	.	CTATA	C	10010.04	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=11.897;DP=710;FS=0.329;HRun=0;HaplotypeScore=170.0993;InbreedingCoeff=0.9191;MQ=77.76;MQ0=3;MQRankSum=-6.193;QD=30.99;ReadPosRankSum=3.013;VQSLOD=4.8341;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,123,2871	0/0:6,0:6:12.04:0,12,294	0/0:34,0:22:19.37:0,19,274	0/1:49,0:31:19.28:19,0,261	1/1:4,22:26:29.90:665,30,0	0/0:3,0:18:36.53:0,37,171	0/0:3,0:24:61.70:0,62,291	1/1:7,24:31:66.16:1029,66,0	0/0:20,0:20:42.14:0,42,1050	1/1:4,28:32:80.88:1273,81,0	1/1:2,23:25:51.26:886,51,0	0/0:18,0:18:51.16:0,51,1208	0/0:25,0:26:66:0,66,1557	1/1:6,24:30:59.94:1042,60,0	0/0:32,0:32:81.26:0,81,1951	1/1:4,26:30:72.25:1250,72,0	1/1:2,15:17:36.12:625,36,0	1/1:2,13:15:30.10:521,30,0	0/0:22,0:24:65.78:0,66,1464	0/0:28,0:28:66.21:0,66,1624	0/0:28,0:29:72.25:0,72,1773	0/0:13,0:13:22.89:0,23,538	0/0:22,0:22:57.20:0,57,1447	0/0:25,0:25:69.24:0,69,1693	1/1:3,28:31:72.22:1250,72,0	1/1:5,25:30:72.22:1189,72,0	0/0:23,0:23:60.17:0,60,1372	1/1:0,7:7:15.05:261,15,0
chr10	46756352	.	T	TA	3112.13	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-11.494;DP=560;FS=3.235;HRun=4;HaplotypeScore=47.3198;InbreedingCoeff=0.9431;MQ=56.99;MQ0=0;MQRankSum=1.193;QD=33.11;ReadPosRankSum=0.098;VQSLOD=3.9262;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:72.21:0,72,816	0/0:8,0:8:24.07:0,24,270	0/0:21,0:6:11.93:0,12,118	0/0:11,0:5:2.95:0,3,56	0/0:26,0:26:74.95:0,75,829	0/0:13,0:13:33.09:0,33,374	0/0:13,0:13:33.09:0,33,374	0/0:30,0:30:87.22:0,87,962	0/0:16,0:16:45.13:0,45,510	0/0:27,0:27:60.15:0,60,667	0/0:21,0:21:63.17:0,63,706	0/0:18,0:18:51.14:0,51,577	0/0:13,0:13:39.11:0,39,441	0/0:23,0:23:69.20:0,69,782	0/0:27,0:27:72.14:0,72,785	0/0:12,0:12:36.09:0,36,398	0/0:40,0:40:99:0,108,1210	0/0:15,0:15:42.12:0,42,476	1/1:1,23:21:56.76:647,57,0	1/1:1,25:26:75.25:1025,75,0	1/1:2,18:20:51.17:697,51,0	0/0:18,0:18:48.13:0,48,537	0/0:17,0:17:42.12:0,42,476	0/0:20,0:20:57.12:0,57,631	0/0:23,0:23:63.16:0,63,700	0/0:21,0:21:57.15:0,57,639	1/1:2,22:24:66.22:902,66,0	0/0:8,0:8:24.07:0,24,272
chr10	46756572	.	C	CAA	3479.10	PASS	AB=0.650;AC=24;AF=0.429;AN=56;BaseQRankSum=-6.485;DP=536;FS=2.416;HRun=14;HaplotypeScore=99.4766;InbreedingCoeff=0.8212;MQ=68.83;MQ0=3;MQRankSum=-1.324;QD=14.44;ReadPosRankSum=-8.211;VQSLOD=0.2205;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:34:62.99:0,63,269	0/0:8,0:8:14.87:0,15,122	0/0:16,0:15:6.01:0,6,82	0/0:17,0:8:6.26:0,6,50	1/1:4,13:27:59.21:438,59,0	0/1:8,1:20:11.27:132,0,11	0/1:13,3:25:0.42:262,0,0	1/1:7,16:25:52.81:577,53,0	0/0:4,0:21:32.86:0,33,140	1/1:5,10:18:29.57:375,30,0	1/1:3,9:16:30.12:302,30,0	0/0:2,0:14:24.61:0,25,105	0/0:1,0:17:27.36:0,27,117	1/1:4,7:12:4.26:42,4,0	0/0:28,0:32:36.08:0,36,323	1/1:4,8:14:11.97:122,12,0	1/1:4,10:16:23.39:251,23,0	1/1:4,11:17:14.03:154,14,0	0/0:7,0:23:43.36:0,43,195	0/0:5,0:14:21.79:0,22,94	0/0:3,0:17:30.11:0,30,129	0/0:3,0:10:10.87:0,11,47	0/0:2,0:23:49.36:0,49,210	0/0:6,0:29:57.54:0,58,245	1/1:4,3:13:21.59:193,22,0	1/1:10,19:30:53.79:513,54,0	0/0:4,0:16:24.56:0,25,106	1/1:1,7:8:9.03:118,9,0
chr10	46756612	.	TG	T	1284.24	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-2.020;DP=547;FS=17.553;HRun=3;HaplotypeScore=91.2842;InbreedingCoeff=0.9872;MQ=69.63;MQ0=1;MQRankSum=-1.123;QD=32.11;ReadPosRankSum=-0.427;VQSLOD=1.7955;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,111,1577	0/0:8,0:8:24.08:0,24,346	0/0:12,0:12:36.05:0,36,486	0/0:16,0:16:39.02:0,39,525	0/0:20,0:20:57.19:0,57,808	1/1:1,19:20:57.18:703,57,0	1/1:0,20:20:57.18:703,57,0	0/0:31,0:30:90.28:0,90,1260	0/0:23,0:23:63.21:0,63,904	0/0:26,0:26:75.25:0,75,1075	0/0:15,0:15:45.15:0,45,646	0/0:15,0:15:39.11:0,39,528	0/0:13,0:13:39.13:0,39,560	0/0:8,0:8:15.05:0,15,216	0/0:33,0:33:93.30:0,93,1317	0/0:11,0:11:21.06:0,21,284	0/0:22,0:22:60.20:0,60,857	0/0:14,0:14:33.11:0,33,474	0/0:20,0:20:57.18:0,57,800	0/0:15,0:15:45.12:0,45,601	0/0:23,0:22:63.21:0,63,906	0/0:8,0:8:24.08:0,24,345	0/0:25,0:25:60.20:0,60,850	0/0:27,0:27:78.24:0,78,1086	0/0:22,0:22:60.18:0,60,844	0/0:27,0:27:81.26:0,81,1134	0/0:21,0:21:57.19:0,57,820	0/0:12,0:12:30.10:0,30,430
chr10	46757942	.	GA	G	1952.20	PASS	AB=0.691;AC=37;AF=0.661;AN=56;BaseQRankSum=-1.345;DP=367;FS=0.000;HRun=15;HaplotypeScore=43.9040;InbreedingCoeff=0.4627;MQ=48.05;MQ0=31;MQRankSum=1.685;QD=6.87;ReadPosRankSum=3.822;VQSLOD=2.0102;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,8:19:5.41:143,5,0	0/1:2,6:9:9.60:66,0,10	0/0:9,0:4:5.83:0,6,36	0/0:4,0:1:2.99:0,3,23	1/1:6,12:19:19.08:108,19,0	0/0:10,0:11:4.34:0,4,121	0/0:11,0:15:6.89:0,7,129	0/1:12,12:24:8.75:134,0,9	1/1:1,4:6:5.87:38,6,0	1/1:5,6:9:11.79:77,12,0	0/1:5,4:7:11.55:62,0,12	1/1:0,5:6:7.95:44,8,0	1/1:5,3:9:13.79:81,14,0	1/1:4,3:7:5.85:38,6,0	1/1:0,5:6:13.86:83,14,0	1/1:1,7:12:24.67:146,25,0	1/1:10,20:31:44.78:362,45,0	1/1:9,8:17:6.15:143,6,0	0/0:8,0:10:20.43:0,20,125	0/1:6,1:16:2.33:2,0,137	0/0:7,0:7:7.24:0,7,56	1/1:4,4:7:18.77:103,19,0	1/1:6,5:9:9.12:59,9,0	0/1:3,6:8:35.06:59,0,35	1/1:3,4:9:15.52:84,16,0	1/1:6,9:14:27.59:165,28,0	0/0:12,0:16:29.06:0,29,179	1/1:8,10:16:20.64:134,21,0
chr10	46761716	.	G	GA	2958.41	PASS	AB=0.923;AC=14;AF=0.250;AN=56;BaseQRankSum=-9.442;DP=690;FS=6.175;HRun=10;HaplotypeScore=74.3230;InbreedingCoeff=0.7807;MQ=77.45;MQ0=0;MQRankSum=-0.866;QD=16.17;ReadPosRankSum=-0.286;VQSLOD=3.9202;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:81.69:0,82,655	0/0:11,0:11:23.95:0,24,197	0/0:23,0:22:20.22:0,20,198	0/1:18,0:17:11.03:11,0,79	0/0:22,0:24:61:0,61,480	1/1:5,20:25:29.38:519,29,0	1/1:3,19:22:48.12:512,48,0	0/0:25,1:26:30.91:0,31,458	0/0:22,0:22:49.94:0,50,437	0/0:34,0:35:73.87:0,74,597	0/0:17,0:18:40.96:0,41,324	0/0:27,1:29:73.92:0,74,594	0/0:35,0:36:88.89:0,89,717	0/0:34,0:34:83.88:0,84,688	0/0:20,0:21:40.88:0,41,319	0/0:27,0:27:59.91:0,60,493	0/0:30,0:30:80.90:0,81,665	0/0:26,0:27:64.27:0,64,501	1/1:11,14:26:44.88:441,45,0	1/1:4,18:22:51.02:508,51,0	1/1:5,30:36:34.79:637,35,0	0/0:26,0:27:70.94:0,71,572	0/1:8,2:11:37.98:38,0,127	0/0:24,0:24:71.86:0,72,582	0/0:16,2:18:1.86:0,2,216	0/0:29,0:29:62.89:0,63,517	1/1:3,18:23:29.19:484,29,0	0/0:11,0:12:31.99:0,32,252
chr10	46763186	.	CCCTGTGACATGTGACATTGGACAAGTGGCTTGG	C	7083.52	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=9.318;DP=614;FS=8.566;HRun=0;HaplotypeScore=481.9203;InbreedingCoeff=0.9310;MQ=81.88;MQ0=0;MQRankSum=-8.080;QD=81.42;ReadPosRankSum=4.095;VQSLOD=2.0740;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,102,12229	0/0:14,0:14:36.12:0,36,4005	0/0:23,0:23:66.21:0,66,4330	0/0:30,0:29:75.48:0,75,4944	0/0:23,0:23:69.24:0,69,6128	1/1:5,6:11:15.05:1278,15,0	1/1:12,6:18:12.04:1038,12,0	0/0:38,0:38:99:0,114,7738	0/0:27,0:27:78.25:0,78,8881	0/0:28,0:28:81.28:0,81,8599	0/0:12,0:12:36.12:0,36,3693	0/0:21,0:21:63.22:0,63,8042	0/0:31,0:31:87.30:0,87,11205	0/0:29,0:29:81.26:0,81,9875	0/0:22,0:22:63.18:0,63,7330	0/0:27,0:27:81.27:0,81,10245	0/0:42,0:42:99:0,117,15290	0/0:27,0:27:81.26:0,81,9915	1/1:5,6:11:18.05:1094,18,0	1/1:4,4:8:6.02:419,6,0	1/1:12,8:20:5.56:402,6,0	0/0:22,0:22:66.21:0,66,7067	0/0:12,0:12:36.12:0,36,4021	0/0:33,0:33:99:0,99,12595	0/0:15,0:15:45.12:0,45,5065	0/0:13,0:13:39.13:0,39,4612	1/1:7,12:19:33.11:2853,33,0	0/0:3,0:3:9.03:0,9,1165
chr10	46763584	.	TTTC	T	5285.46	PASS	AB=1.000;AC=19;AF=0.352;AN=54;BaseQRankSum=-9.993;DP=646;FS=3.660;HRun=0;HaplotypeScore=114.5720;InbreedingCoeff=0.7230;MQ=61.55;MQ0=12;MQRankSum=2.589;QD=20.57;ReadPosRankSum=1.006;VQSLOD=4.5576;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:25:36.11:0,36,473	0/0:11,0:11:0.26:0,0,1	0/0:27,0:20:8.70:0,9,55	0/0:12,0:11:7.79:0,8,51	1/1:23,0:23:36.12:492,36,0	0/0:19,0:19:0.82:0,1,2	0/0:21,0:20:1.41:0,1,3	1/1:27,15:40:45.10:586,45,0	0/0:24,0:23:45.12:0,45,568	1/1:28,0:26:54.18:731,54,0	1/1:13,1:13:15.05:200,15,0	0/0:24,0:24:48:0,48,561	0/0:16,0:14:12.04:0,12,166	1/1:29,1:29:38.79:524,39,0	0/0:21,0:20:5.17:0,5,45	0/1:33,0:33:21.92:611,0,22	1/1:21,1:22:39.60:519,40,0	1/1:16,0:16:25.18:282,25,0	0/0:18,0:22:2.41:0,2,17	0/0:20,0:20:7.08:0,7,64	0/0:26,0:24:5.62:0,6,43	0/0:20,0:20:39.13:0,39,536	0/0:14,0:13:30.07:0,30,356	0/0:35,0:34:33.99:0,34,419	1/1:21,0:21:47.07:551,47,0	1/1:28,0:27:63.12:790,63,0	0/0:17,0:17:2.82:0,3,75	./.
chr10	46763702	.	CTCT	C	3421.65	PASS	AB=0.787;AC=17;AF=0.340;AN=50;BaseQRankSum=-7.877;DP=634;FS=4.241;HRun=0;HaplotypeScore=72.0027;InbreedingCoeff=0.3103;MQ=20.97;MQ0=184;MQRankSum=-0.625;QD=10.31;ReadPosRankSum=0.602;VQSLOD=2.5559;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:49,0:27:1.04:1,0,265	0/0:10,0:6:12.04:0,12,200	./.	./.	1/1:3,14:14:31.91:461,32,0	0/0:12,0:8:10.60:0,11,74	0/0:17,0:4:6.02:0,6,85	1/1:15,9:11:26.83:343,27,0	0/0:39,0:6:12.01:0,12,113	0/1:19,18:20:20.24:570,0,20	1/1:7,21:23:24.05:348,24,0	0/0:22,0:10:24.04:0,24,245	0/0:36,0:14:24:0,24,213	0/1:14,8:10:4.75:319,0,5	0/0:30,0:14:8.22:0,8,270	1/1:19,10:19:26.43:355,26,0	0/1:30,3:7:18.63:42,0,19	0/1:18,7:13:29.92:279,0,30	./.	0/0:9,0:6:3.38:0,3,11	0/0:18,0:3:6.01:0,6,72	0/0:20,0:13:23.83:0,24,222	0/0:16,0:3:8.95:0,9,73	0/0:54,0:23:3.14:0,3,148	1/1:4,14:15:14.92:209,15,0	0/1:11,15:16:47.08:407,0,47	0/0:16,0:3:4.53:0,5,24	0/1:16,7:14:38.03:87,0,38
chr10	46763786	.	TTCC	T	1475.69	PASS	AB=0.985;AC=19;AF=0.339;AN=56;BaseQRankSum=4.025;DP=431;FS=1.449;HRun=0;HaplotypeScore=69.7725;InbreedingCoeff=0.4616;MQ=35.20;MQ0=53;MQRankSum=-4.239;QD=7.42;ReadPosRankSum=0.939;VQSLOD=2.4283;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:25,1:19:15.09:132,0,15	0/1:7,0:6:10.49:10,0,14	0/0:15,0:1:3.01:0,3,61	0/1:14,0:1:0:0,0,0	0/0:16,0:13:6.02:0,6,98	0/0:14,0:7:3.46:0,3,23	0/0:4,0:3:5.64:0,6,27	0/0:24,0:7:6.02:0,6,106	1/1:6,17:17:33.10:443,33,0	0/0:24,0:23:33.11:0,33,587	0/0:11,0:9:9.03:0,9,174	1/1:7,7:11:18.05:235,18,0	1/1:6,8:7:8.99:106,9,0	0/0:22,0:15:18.04:0,18,274	0/1:19,0:17:26.86:63,0,27	0/1:23,1:21:17.67:18,0,333	0/0:14,0:8:3.47:0,3,66	0/0:7,0:3:9.03:0,9,121	0/0:7,0:4:8.01:0,8,66	0/0:13,0:12:14.77:0,15,141	0/0:21,0:18:23.84:0,24,185	1/1:7,14:17:23.98:276,24,0	1/1:5,3:7:12.03:155,12,0	1/1:19,4:17:7.66:202,8,0	0/0:13,0:13:8.97:0,9,133	0/0:17,0:14:17.91:0,18,247	1/1:6,0:2:2.84:14,3,0	0/0:10,0:9:15.05:0,15,239
chr10	46763816	.	TCCTCCTCTTCCTCTC	T	1246.69	PASS	AB=0.938;AC=16;AF=0.296;AN=54;BaseQRankSum=-1.641;DP=298;FS=5.449;HRun=0;HaplotypeScore=112.0912;InbreedingCoeff=0.3192;MQ=54.86;MQ0=9;MQRankSum=-2.363;QD=10.75;ReadPosRankSum=-1.585;VQSLOD=1.2202;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:13:9.94:0,10,1147	0/1:8,0:8:20.32:20,0,183	0/1:30,0:5:11.53:12,0,84	0/0:25,0:7:12.03:0,12,219	1/1:4,0:4:3:25,3,0	0/0:5,0:5:5.94:0,6,178	0/0:5,0:4:12:0,12,252	./.	0/0:16,0:15:11.12:0,11,293	1/1:7,2:9:17.07:499,17,0	0/0:2,0:2:1.36:0,1,3	0/0:12,0:12:17.89:0,18,645	0/0:12,0:11:21.07:0,21,721	1/1:7,0:7:7.78:129,8,0	0/1:19,0:16:7.53:8,0,102	0/1:9,0:8:4.80:133,0,5	0/1:7,0:5:32.07:32,0,35	0/0:4,0:2:2.79:0,3,15	0/0:7,0:3:6.02:0,6,192	0/0:6,0:5:12.04:0,12,441	0/0:29,0:26:57.14:0,57,2408	0/0:13,0:13:26.88:0,27,1008	0/0:8,0:7:11.95:0,12,343	0/0:16,0:15:23.01:0,23,929	0/1:4,6:9:6.48:70,0,6	1/1:7,0:6:12.04:404,12,0	0/0:1,0:1:2.98:0,3,22	1/1:6,0:6:2.47:76,2,0
chr10	46763838	.	CCTCCTCTACCT	C	748.91	PASS	AB=0.964;AC=11;AF=0.196;AN=56;BaseQRankSum=5.341;DP=280;FS=0.930;HRun=0;HaplotypeScore=111.5288;InbreedingCoeff=0.1559;MQ=61.25;MQ0=7;MQRankSum=-5.695;QD=11.89;ReadPosRankSum=2.391;VQSLOD=2.1940;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:21:54.05:0,54,1848	0/1:2,1:3:21.93:58,0,22	0/0:27,0:5:8.55:0,9,67	0/0:17,0:8:9.22:0,9,120	0/1:1,0:1:0:0,0,0	0/0:2,0:2:6.02:0,6,227	0/0:8,0:8:24.08:0,24,548	0/0:3,0:2:3.01:0,3,61	0/0:11,0:10:12.04:0,12,327	0/1:13,0:13:99:210,0,321	0/0:4,0:3:8.92:0,9,115	0/0:13,0:12:27.09:0,27,996	0/0:10,0:10:24.08:0,24,885	0/0:5,0:5:6.44:0,6,75	1/1:7,4:11:5.35:397,5,0	0/1:4,0:3:30.34:30,0,61	0/0:8,0:7:15.47:0,15,282	0/1:3,0:2:3.51:8,0,4	0/0:6,0:3:6.02:0,6,216	0/0:8,0:7:18.06:0,18,719	0/0:34,0:32:77.64:0,78,3190	0/0:15,0:15:38.79:0,39,1449	0/0:6,0:5:15.05:0,15,463	0/0:15,0:13:30.57:0,31,1084	1/1:7,0:7:2.98:22,3,0	0/1:14,0:14:99:149,0,355	0/0:2,0:2:6.02:0,6,221	0/1:7,0:6:10.12:10,0,150
chr10	46763896	.	CCCT	C	533.03	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-0.231;DP=563;FS=1.052;HRun=0;HaplotypeScore=102.0909;InbreedingCoeff=0.9400;MQ=51.47;MQ0=19;MQRankSum=-1.485;QD=28.05;ReadPosRankSum=-0.153;VQSLOD=3.3945;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:38:81.23:0,81,1670	1/1:2,3:5:9.03:139,9,0	0/0:27,0:5:12:0,12,171	0/0:43,0:8:17.51:0,18,201	0/0:16,0:16:35.79:0,36,493	0/0:10,0:10:30.10:0,30,619	0/0:15,0:14:33.11:0,33,697	0/0:19,0:14:27.56:0,28,390	0/0:19,0:14:39.13:0,39,830	0/0:34,0:32:87.22:0,87,1252	0/0:9,0:9:21.07:0,21,309	0/0:15,0:12:33.11:0,33,672	0/0:14,0:12:27.09:0,27,522	0/0:15,0:12:30.10:0,30,466	1/1:3,11:14:31.95:508,32,0	0/0:16,0:15:42.14:0,42,638	0/0:20,0:20:36.57:0,37,681	0/0:20,0:19:50.87:0,51,725	0/0:24,0:12:30.10:0,30,624	0/0:12,0:11:21.07:0,21,451	0/0:59,0:54:99:0,99,2371	0/0:22,0:22:63.20:0,63,1265	0/0:13,0:10:27.09:0,27,579	0/0:18,0:16:39.13:0,39,798	0/0:19,0:19:45.15:0,45,685	0/0:25,0:22:60.19:0,60,929	0/0:7,0:7:21.07:0,21,450	0/0:13,0:12:33.11:0,33,506
chr10	46767126	.	TC	T	5387.45	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=10.540;DP=613;FS=6.312;HRun=8;HaplotypeScore=63.7791;InbreedingCoeff=0.9986;MQ=88.16;MQ0=0;MQRankSum=-3.069;QD=24.27;ReadPosRankSum=1.336;VQSLOD=5.7381;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:50:99:0,132,1547	0/0:8,0:9:20.85:0,21,215	0/0:31,0:31:63.19:0,63,759	0/0:20,0:20:48.13:0,48,554	1/1:1,13:14:35.96:328,36,0	0/0:20,0:20:51.16:0,51,616	0/0:15,0:15:39.10:0,39,459	1/1:3,17:20:48.07:464,48,0	0/0:17,0:17:48.12:0,48,557	1/1:2,26:28:78.12:753,78,0	1/1:1,15:16:42.02:396,42,0	0/0:25,0:25:72.22:0,72,870	0/0:15,0:15:42.13:0,42,507	1/1:1,16:17:48.08:463,48,0	0/0:25,0:25:72.21:0,72,859	1/1:2,13:15:30.05:290,30,0	1/1:1,33:34:93.15:898,93,0	1/1:2,28:30:78.12:753,78,0	0/0:19,0:19:54.16:0,54,640	0/0:21,0:21:57.15:0,57,666	0/0:35,0:35:99:0,99,1145	0/0:25,0:25:69.21:0,69,833	0/0:15,0:15:33.08:0,33,385	0/0:21,0:21:57.17:0,57,689	1/1:4,14:18:39.06:377,39,0	1/1:3,17:20:48.07:463,48,0	0/0:27,0:27:72.21:0,72,858	1/1:3,7:10:21.03:203,21,0
chr10	46767619	.	GGACAGT	G	3408.78	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=10.614;DP=746;FS=3.214;HRun=0;HaplotypeScore=154.3780;InbreedingCoeff=0.9988;MQ=90.54;MQ0=0;MQRankSum=-9.832;QD=37.05;ReadPosRankSum=-1.946;VQSLOD=2.8491;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,132,4405	0/0:11,0:11:33.11:0,33,1005	0/0:34,0:34:96.33:0,96,3059	0/0:30,0:30:81.25:0,81,2643	0/0:17,0:17:41.73:0,42,1497	0/0:19,0:19:48.11:0,48,1390	0/0:29,0:29:84.29:0,84,2783	0/0:42,0:42:99:0,117,3835	0/0:26,0:26:75.26:0,75,2496	0/0:19,0:19:51.17:0,51,1646	0/0:10,0:10:27.09:0,27,929	0/0:39,0:39:99:0,114,3828	0/0:29,0:29:81.25:0,81,2654	0/0:34,0:34:96.33:0,96,3344	0/0:39,0:39:99:0,105,3557	0/0:29,0:28:84.29:0,84,2930	0/0:28,0:28:84.27:0,84,2910	0/0:27,0:27:72.20:0,72,2467	1/1:5,20:25:60.12:1211,60,0	1/1:1,8:9:24:464,24,0	1/1:6,32:38:31.96:600,32,0	0/0:26,0:26:69.22:0,69,2286	0/0:12,0:12:30.10:0,30,1060	0/0:30,0:30:87.21:0,87,2834	0/0:23,0:23:60.18:0,60,2051	0/0:34,0:34:87.30:0,87,2980	1/1:1,19:20:48.16:1133,48,0	0/0:19,0:19:51.18:0,51,1812
chr10	46768197	.	G	GAAGA	6594.04	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=2.197;DP=607;FS=5.266;HRun=0;HaplotypeScore=124.1357;InbreedingCoeff=0.9714;MQ=87.30;MQ0=0;MQRankSum=-8.603;QD=56.36;ReadPosRankSum=0.075;VQSLOD=6.3792;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,117,2111	0/0:4,0:4:6.02:0,6,110	0/0:34,0:34:90.20:0,90,1511	0/0:22,0:22:54.65:0,55,943	0/0:18,0:18:39.08:0,39,670	1/1:7,18:25:66.23:1575,66,0	1/1:7,15:22:54.19:1364,54,0	0/0:35,0:35:99:0,99,1776	0/0:17,0:17:51.13:0,51,895	0/0:20,0:20:51.17:0,51,909	0/0:9,0:9:24.08:0,24,441	0/0:31,0:31:87.27:0,87,1540	0/0:18,0:18:54.18:0,54,978	0/0:15,0:15:39.13:0,39,706	0/0:24,0:24:69.24:0,69,1253	0/0:22,0:22:60.17:0,60,1025	0/0:31,0:31:93.30:0,93,1655	0/0:26,0:26:66.16:0,66,1147	1/1:10,8:16:30.10:770,30,0	1/1:1,3:4:12.04:294,12,0	1/1:4,20:25:60.21:1402,60,0	0/0:13,0:13:36.12:0,36,662	0/0:15,0:15:45.14:0,45,797	0/0:34,0:34:96.31:0,96,1720	0/0:16,0:16:39.13:0,39,712	0/0:30,0:30:87.29:0,87,1568	1/1:8,15:23:48.16:1190,48,0	0/0:12,0:12:21.07:0,21,386
chr10	46768251	.	CTA	C	14906.34	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=16.967;DP=599;FS=15.238;HRun=0;HaplotypeScore=111.2555;InbreedingCoeff=0.9971;MQ=80.90;MQ0=0;MQRankSum=-3.846;QD=41.41;ReadPosRankSum=0.077;VQSLOD=5.2176;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:87.28:0,87,1643	0/0:6,0:6:18.02:0,18,278	0/0:16,0:16:45.11:0,45,797	0/0:18,0:18:48.06:0,48,810	1/1:0,15:15:45.15:688,45,0	1/1:4,23:27:72.24:1087,72,0	1/1:0,25:25:75.25:1146,75,0	1/1:3,29:32:87.23:1252,87,0	0/0:12,0:12:36.12:0,36,684	1/1:1,23:24:69.22:1028,69,0	1/1:0,11:11:27.09:413,27,0	0/0:31,0:31:93.31:0,93,1753	0/0:23,0:23:69.24:0,69,1332	1/1:0,14:14:42.14:643,42,0	0/0:25,0:25:75.26:0,75,1448	1/1:1,27:28:17.29:1044,17,0	1/1:0,33:33:96.33:1461,96,0	1/1:0,28:28:81.28:1239,81,0	1/1:0,15:15:45.14:668,45,0	1/1:0,12:12:36.12:541,36,0	1/1:0,17:17:42.14:640,42,0	0/0:11,0:11:30.10:0,30,578	0/0:23,0:23:66.21:0,66,1239	0/0:41,0:41:99:0,120,2236	1/1:1,15:16:42.14:643,42,0	1/1:2,32:34:96.22:1339,96,0	1/1:1,14:15:42.14:642,42,0	1/1:2,12:14:30.05:432,30,0
chr10	46768341	.	A	ATT	12847.25	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=12.887;DP=518;FS=1.800;HRun=7;HaplotypeScore=104.9429;InbreedingCoeff=0.9847;MQ=65.16;MQ0=0;MQRankSum=-3.626;QD=37.02;ReadPosRankSum=-0.254;VQSLOD=4.1139;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:66.20:0,66,769	0/0:10,0:10:21.06:0,21,245	0/0:12,0:11:20.84:0,21,244	0/0:15,0:14:39.11:0,39,446	1/1:1,17:18:48.16:777,48,0	1/1:2,10:12:30.10:492,30,0	1/1:1,14:15:30.10:492,30,0	1/1:11,35:48:99:1678,108,0	0/0:16,0:16:36.09:0,36,420	1/1:4,19:23:57.19:935,57,0	1/1:3,9:12:33.07:500,33,0	0/0:15,0:15:33.09:0,33,384	0/0:17,0:17:36.09:0,36,420	1/1:4,11:15:36.12:577,36,0	0/0:12,0:12:24.07:0,24,280	1/1:5,13:18:7.05:605,7,0	1/1:5,18:23:48.16:788,48,0	1/1:6,12:18:36.08:561,36,0	1/1:8,10:18:36.11:566,36,0	1/1:4,26:31:78.17:1193,78,0	1/1:2,6:8:18.06:295,18,0	0/0:18,0:18:41.91:0,42,489	0/0:13,0:13:33.09:0,33,384	0/0:20,0:20:35.89:0,36,530	1/1:4,22:26:60.20:985,60,0	1/1:11,16:27:62:947,62,0	1/1:4,14:18:45.15:717,45,0	1/1:3,14:17:45.15:739,45,0
chr10	46768454	.	AG	A	6227.32	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=9.453;DP=443;FS=13.598;HRun=4;HaplotypeScore=58.1407;InbreedingCoeff=0.9876;MQ=72.90;MQ0=5;MQRankSum=-0.134;QD=31.29;ReadPosRankSum=-1.735;VQSLOD=3.3608;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:90.23:0,90,1194	0/0:4,0:4:9.03:0,9,126	0/0:15,0:12:17.23:0,17,259	0/0:15,0:13:30.03:0,30,370	1/1:1,17:18:39.02:434,39,0	0/0:13,0:13:36.03:0,36,470	0/0:12,0:11:18.06:0,18,252	1/1:3,26:28:78.21:913,78,0	0/0:12,0:12:33.09:0,33,444	1/1:1,20:21:63.19:750,63,0	1/1:0,16:15:44.93:486,45,0	0/0:11,0:11:27.09:0,27,377	0/0:14,0:13:32.05:0,32,460	1/1:3,7:9:27.06:302,27,0	0/0:9,0:9:27.08:0,27,362	1/1:0,15:15:39.12:468,39,0	1/1:0,36:36:99:1186,99,0	1/1:2,16:18:48.15:574,48,0	0/0:17,0:17:48.15:0,48,643	0/0:8,0:8:24.08:0,24,334	0/0:13,0:12:30.10:0,30,417	0/0:18,0:18:51.11:0,51,655	0/0:12,0:12:27.08:0,27,359	0/0:26,0:25:75.22:0,75,995	1/1:1,16:17:39.12:468,39,0	1/1:0,10:10:30.09:359,30,0	0/0:14,0:14:42.14:0,42,582	1/1:1,8:8:24.07:288,24,0
chr10	46768543	.	G	GA	1810.24	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=11.094;DP=567;FS=0.504;HRun=8;HaplotypeScore=79.4384;InbreedingCoeff=0.9287;MQ=64.21;MQ0=6;MQRankSum=-10.572;QD=23.21;ReadPosRankSum=-1.249;VQSLOD=3.6057;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:33:81.43:0,81,764	0/0:6,0:4:9:0,9,82	0/0:38,1:20:4.57:0,5,208	0/0:32,0:15:17.35:0,17,132	0/0:26,0:25:66.01:0,66,599	1/1:2,11:12:36.10:403,36,0	1/1:4,8:11:21.06:240,21,0	0/0:34,0:32:84.02:0,84,762	0/0:16,0:16:48.03:0,48,438	0/0:29,0:28:72.03:0,72,659	0/0:13,0:11:21:0,21,188	0/0:19,0:19:48.01:0,48,436	0/0:15,0:15:41.89:0,42,384	0/0:24,0:22:59.04:0,59,520	0/0:10,0:10:30.02:0,30,274	0/0:15,0:15:42.01:0,42,381	0/0:40,0:40:99:0,108,987	0/0:36,0:38:95.06:0,95,852	1/1:4,13:15:8.61:338,9,0	1/1:2,9:11:30.09:346,30,0	1/1:1,4:4:8.98:89,9,0	0/0:8,0:6:15:0,15,137	0/0:12,0:11:27.01:0,27,247	0/0:18,0:17:45.02:0,45,412	0/0:10,0:9:21:0,21,192	0/0:18,0:17:51.03:0,51,466	1/1:5,15:19:51.14:575,51,0	0/0:31,0:31:78.03:0,78,713
chr10	46768559	.	CA	C	1277.77	PASS	AB=0.941;AC=13;AF=0.232;AN=56;BaseQRankSum=9.366;DP=565;FS=2.051;HRun=10;HaplotypeScore=85.2217;InbreedingCoeff=0.7851;MQ=63.93;MQ0=3;MQRankSum=-7.937;QD=10.83;ReadPosRankSum=-1.009;VQSLOD=3.0374;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,3:36:55.13:0,55,817	0/0:5,0:5:9.02:0,9,100	0/1:30,2:20:37.62:38,0,162	0/0:22,0:13:15.38:0,15,156	0/0:24,2:26:8.06:0,8,545	1/1:1,0:13:22.40:66,22,0	1/1:0,0:10:18.80:55,19,0	0/0:34,2:36:35.14:0,35,843	0/0:17,0:17:51.14:0,51,564	0/0:29,0:29:72.19:0,72,794	0/0:10,0:10:21.06:0,21,232	0/0:18,2:20:2.01:0,2,462	0/0:15,0:15:42.11:0,42,464	0/0:21,0:21:54.13:0,54,589	0/0:17,0:17:45.12:0,45,497	0/0:18,0:18:51.14:0,51,564	0/0:41,1:42:88.22:0,88,1185	0/0:39,0:39:99:0,99,1093	1/1:7,14:20:41.97:361,42,0	1/1:0,14:14:41.99:364,42,0	1/1:1,5:5:9:78,9,0	0/0:7,0:7:21.06:0,21,232	0/0:12,0:12:33.09:0,33,365	0/0:18,0:18:48.11:0,48,514	0/0:9,1:10:1.01:0,1,233	0/0:19,1:20:22.05:0,22,457	1/1:4,16:21:59.03:500,59,0	0/0:25,1:26:46.09:0,46,709
chr10	46768656	.	T	TCAA	7477.62	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=1.424;DP=661;FS=0.377;HRun=0;HaplotypeScore=103.8116;InbreedingCoeff=0.9992;MQ=70.13;MQ0=0;MQRankSum=-5.256;QD=51.93;ReadPosRankSum=-1.422;VQSLOD=6.4721;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:58:99:0,153,2544	0/0:10,0:10:30.08:0,30,459	0/0:21,0:18:51.16:0,51,804	0/0:29,0:25:26.59:0,27,787	0/0:24,0:24:66.21:0,66,1094	1/1:2,10:12:27.05:573,27,0	1/1:3,26:30:72.25:1659,72,0	0/0:30,0:29:75.24:0,75,1223	0/0:25,0:25:75.26:0,75,1268	0/0:18,0:18:51.17:0,51,870	0/0:12,0:12:33.11:0,33,562	0/0:25,0:25:69.21:0,69,1148	0/0:20,0:20:51.17:0,51,869	0/0:27,0:26:75.26:0,75,1257	0/0:17,0:17:45.15:0,45,768	0/0:23,0:23:66.23:0,66,1121	0/0:32,0:32:93.30:0,93,1533	0/0:21,0:21:60.20:0,60,1004	1/1:5,14:21:60.15:1153,60,0	1/1:2,17:22:54.10:1118,54,0	1/1:8,27:39:87.08:1742,87,0	0/0:17,0:17:51.17:0,51,867	0/0:13,0:13:36.12:0,36,614	0/0:38,0:38:99:0,108,1778	0/0:17,0:17:51.17:0,51,866	0/0:30,0:30:87.25:0,87,1449	1/1:2,17:20:54.19:1233,54,0	0/0:9,0:9:27.09:0,27,461
chr10	46768825	.	C	CG	2441.07	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=17.521;DP=615;FS=0.707;HRun=6;HaplotypeScore=140.3002;InbreedingCoeff=0.9855;MQ=64.02;MQ0=0;MQRankSum=-10.626;QD=10.05;ReadPosRankSum=-1.034;VQSLOD=0.6935;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:56.99:0,57,724	0/0:7,0:7:15.03:0,15,151	0/0:14,0:14:33:0,33,319	0/0:9,0:9:16.68:0,17,185	1/1:17,0:17:21.81:111,22,0	0/0:15,0:15:33.05:0,33,329	0/0:38,0:38:99:0,102,1028	1/1:19,0:19:34.58:189,35,0	0/0:27,0:27:69.10:0,69,681	1/1:23,2:25:46.13:240,46,0	1/1:10,1:11:13.99:77,14,0	0/0:35,0:35:87.17:0,87,876	0/0:29,0:29:78.17:0,78,793	1/1:31,0:30:66.74:368,67,0	0/0:25,0:25:63.13:0,63,641	1/1:32,0:32:66.96:394,67,0	1/1:32,0:32:82.48:468,82,0	1/1:23,0:23:43.78:281,44,0	0/0:18,0:18:26.12:0,26,418	0/0:12,0:12:30.03:0,30,291	0/0:50,0:50:99:0,105,1063	0/0:7,0:7:15.03:0,15,153	0/0:6,0:6:12.02:0,12,122	0/0:31,0:31:84.19:0,84,855	1/1:18,1:19:38.46:194,38,0	1/1:23,1:24:44.72:210,45,0	0/0:18,0:18:54.12:0,54,550	1/1:10,0:10:25.11:133,25,0
chr10	46768831	.	GT	G	4258.24	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=18.615;DP=591;FS=0.000;HRun=1;HaplotypeScore=128.7717;InbreedingCoeff=0.9865;MQ=63.24;MQ0=0;MQRankSum=-9.451;QD=19.10;ReadPosRankSum=0.705;VQSLOD=4.9016;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:67.14:0,67,1081	0/0:5,0:5:15.05:0,15,189	0/0:11,0:11:32.97:0,33,373	0/0:11,0:11:16.97:0,17,225	1/1:2,9:14:26.60:189,27,0	0/0:13,0:13:33.08:0,33,431	0/0:37,0:37:99:0,111,1366	1/1:7,9:18:43.94:318,44,0	0/0:29,0:29:84.11:0,84,981	1/1:6,16:22:56.65:423,57,0	1/1:3,6:9:16.94:118,17,0	0/0:32,0:32:96.17:0,96,1205	0/0:30,0:30:87.23:0,87,1124	1/1:5,23:28:83.08:601,83,0	0/0:25,0:25:75.12:0,75,944	1/1:11,20:31:76.95:589,77,0	1/1:3,26:31:89.37:692,89,0	1/1:1,14:20:50.59:384,51,0	0/0:20,0:20:38.12:0,38,682	0/0:12,0:12:36.10:0,36,448	0/0:43,0:43:99:0,123,1526	0/0:7,0:7:18.03:0,18,224	0/0:7,0:7:10.01:0,10,195	0/0:34,0:34:96.23:0,96,1219	1/1:5,13:18:41.71:309,42,0	1/1:4,15:19:53.59:392,54,0	0/0:19,0:19:54.17:0,54,731	1/1:6,6:12:32.78:243,33,0
chr10	46768835	.	GGGT	G	4901.31	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=18.677;DP=585;FS=0.000;HRun=0;HaplotypeScore=147.1933;InbreedingCoeff=0.9627;MQ=59.99;MQ0=0;MQRankSum=-11.312;QD=21.69;ReadPosRankSum=0.735;VQSLOD=4.8150;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:90.29:0,90,1918	0/0:7,0:7:21.07:0,21,406	0/0:9,0:9:1.18:0,1,318	0/0:9,0:9:14.57:0,15,257	1/1:14,0:14:23.38:170,23,0	0/0:12,0:12:33.10:0,33,660	0/0:38,0:38:99:0,108,2240	1/1:12,4:16:36.75:279,37,0	0/0:26,0:26:72.24:0,72,1488	1/1:25,0:25:67.83:553,68,0	1/1:11,0:11:20.39:151,20,0	0/0:31,0:31:93.32:0,93,2027	0/0:31,0:31:90.26:0,90,1825	1/1:31,0:30:89.19:775,89,0	0/0:26,0:26:75.24:0,75,1576	1/1:23,6:29:65.67:588,66,0	1/1:34,0:34:92.62:823,93,0	1/1:19,0:19:53.75:492,54,0	0/0:20,0:20:60.21:0,60,1297	0/0:11,0:11:30.10:0,30,663	0/0:42,0:42:99:0,114,2371	0/0:8,0:8:21.07:0,21,445	0/0:8,0:8:24.07:0,24,439	0/0:31,0:31:87.25:0,87,1897	1/1:14,2:16:41.86:340,42,0	1/1:19,0:19:53.73:451,54,0	0/0:19,0:19:54.18:0,54,1175	1/1:12,0:12:29.93:280,30,0
chr10	46768837	.	GT	G	4092.02	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=18.889;DP=573;FS=0.000;HRun=1;HaplotypeScore=123.4072;InbreedingCoeff=0.8963;MQ=56.55;MQ0=0;MQRankSum=-11.863;QD=17.71;ReadPosRankSum=0.700;VQSLOD=3.7739;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:90.27:0,90,1272	0/0:7,0:7:20.96:0,21,245	0/0:6,1:7:1.18:0,1,201	0/1:6,0:7:12.16:12,0,163	1/1:3,11:14:23.75:179,24,0	0/0:12,0:12:33.08:0,33,443	0/0:37,0:37:99:0,108,1470	1/1:7,9:16:34.67:212,35,0	0/0:24,0:24:72.20:0,72,1005	1/1:9,16:25:69.50:496,70,0	1/1:5,6:11:20.15:138,20,0	0/0:31,0:31:93.30:0,93,1327	0/0:31,0:31:90.21:0,90,1210	1/1:11,21:31:89.18:632,89,0	0/0:26,0:26:75.22:0,75,1056	1/1:7,19:26:65.09:477,65,0	1/1:9,25:34:88.97:672,89,0	1/1:5,14:19:51.45:384,51,0	0/0:20,0:20:60.19:0,60,844	0/0:11,0:11:30.09:0,30,423	0/0:41,0:41:99:0,117,1591	0/0:8,0:8:21.05:0,21,285	0/0:8,0:8:22.87:0,23,285	0/0:29,0:29:87.25:0,87,1246	1/1:3,13:16:41.63:297,42,0	1/1:4,15:19:54.15:380,54,0	0/0:19,0:19:57.17:0,57,800	1/1:6,6:12:29.73:213,30,0
chr10	46768842	.	TGGC	T	1370.25	PASS	AB=0.929;AC=20;AF=0.357;AN=56;BaseQRankSum=17.203;DP=580;FS=5.176;HRun=0;HaplotypeScore=152.7012;InbreedingCoeff=0.8567;MQ=60.52;MQ0=0;MQRankSum=-11.150;QD=5.98;ReadPosRankSum=2.684;VQSLOD=2.4887;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:84.29:0,84,1984	0/0:8,0:8:24.07:0,24,519	0/0:8,0:8:18.95:0,19,411	0/0:11,0:11:22.80:0,23,351	1/1:12,0:12:16:69,16,0	0/0:12,0:12:33.11:0,33,768	0/0:36,0:36:99:0,105,2400	0/1:17,0:17:2.35:67,0,2	0/0:22,0:22:66.23:0,66,1532	1/1:22,4:26:42.77:218,43,0	0/1:10,2:12:13.13:21,0,13	0/0:30,0:30:90.30:0,90,2050	0/0:31,0:31:93.32:0,93,2112	1/1:33,1:34:80.09:402,80,0	0/0:25,0:25:72.25:0,72,1699	1/1:27,0:27:21.97:132,22,0	1/1:32,0:32:35.77:176,36,0	1/1:18,0:18:34.63:155,35,0	0/0:22,0:22:65.98:0,66,1398	0/0:11,0:11:33.07:0,33,677	0/0:42,0:42:99:0,123,2713	0/0:8,0:8:21.07:0,21,496	0/0:8,0:8:24.08:0,24,547	0/0:30,0:30:90.29:0,90,2050	1/1:18,0:18:11.62:93,12,0	1/1:20,1:21:25.76:159,26,0	0/0:19,0:19:57.20:0,57,1331	1/1:12,0:12:7.96:89,8,0
chr10	46769547	.	A	AC	5839.69	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-6.405;DP=674;FS=0.362;HRun=0;HaplotypeScore=89.8919;InbreedingCoeff=0.9999;MQ=72.56;MQ0=1;MQRankSum=-3.465;QD=42.63;ReadPosRankSum=1.624;VQSLOD=5.2298;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:63.14:0,63,856	0/0:11,0:11:33.11:0,33,459	0/0:29,0:28:66.84:0,67,933	0/0:25,0:24:57.73:0,58,687	0/0:22,0:22:63.21:0,63,875	1/1:1,23:24:63.21:1002,63,0	1/1:0,26:26:69.24:1100,69,0	0/0:25,0:25:72.23:0,72,976	0/0:18,0:18:48.15:0,48,649	0/0:28,0:28:84.26:0,84,1132	0/0:17,0:17:48.16:0,48,669	0/0:25,0:25:72.23:0,72,989	0/0:21,0:21:60.20:0,60,838	0/0:25,0:25:75.25:0,75,1048	0/0:43,0:43:99:0,120,1674	0/0:29,0:29:84.16:0,84,1132	0/0:25,0:25:72.12:0,72,944	0/0:30,1:31:42.46:0,42,1162	1/1:0,16:16:45.14:677,45,0	1/1:0,13:13:39.13:623,39,0	1/1:0,22:22:63.21:1001,63,0	0/0:17,0:17:48.16:0,48,669	0/0:26,0:26:78.26:0,78,1090	0/0:36,0:36:99:0,105,1444	0/0:16,0:16:48.16:0,48,669	0/0:33,0:33:99:0,99,1377	1/1:1,35:34:90.03:1437,90,0	0/0:12,0:12:36.12:0,36,503
chr10	46769629	.	CAG	C	1590.84	PASS	AB=0.881;AC=14;AF=0.250;AN=56;BaseQRankSum=-2.948;DP=640;FS=26.597;HRun=0;HaplotypeScore=211.5037;InbreedingCoeff=-0.3104;MQ=50.71;MQ0=10;MQRankSum=0.867;QD=5.08;ReadPosRankSum=-0.536;VQSLOD=1.3856;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:32.78:0,33,265	0/0:2,0:16:16.71:0,17,110	0/0:36,0:18:33.84:0,34,338	0/0:32,0:19:7.92:0,8,231	0/1:28,3:31:65.79:209,0,66	0/0:26,0:26:28.01:0,28,329	0/0:24,0:23:53.49:0,53,412	0/1:20,0:23:26.27:135,0,26	0/1:19,0:18:3.38:3,0,77	0/1:24,2:29:81.32:248,0,81	0/1:8,2:13:66.77:100,0,67	0/0:12,0:12:20.99:0,21,181	0/1:18,0:18:25.60:26,0,82	0/1:16,1:16:89.38:136,0,89	0/0:2,0:38:30.18:0,30,148	0/1:19,0:20:86.55:87,0,190	0/1:23,4:26:99:199,0,124	0/1:17,8:25:2.30:2,0,205	0/0:18,0:14:27.76:0,28,231	0/0:22,0:23:11.57:0,12,235	0/0:22,0:22:31.68:0,32,256	0/0:16,0:16:10.76:0,11,79	0/0:10,0:10:14.96:0,15,122	0/0:27,0:27:20.34:0,20,173	0/1:17,1:20:62.52:126,0,63	0/1:30,4:35:99:393,0,110	0/1:17,0:17:1.91:2,0,233	0/1:9,1:11:69.82:70,0,78
chr10	46769705	.	GAGAGAGAGAC	G	477.97	PASS	AC=2;AF=0.037;AN=54;BaseQRankSum=1.349;DP=706;FS=0.000;HRun=0;HaplotypeScore=231.2482;InbreedingCoeff=0.8221;MQ=63.54;MQ0=8;MQRankSum=0.801;QD=19.92;ReadPosRankSum=-3.353;VQSLOD=2.2813;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:54.16:0,54,2038	0/0:12,0:12:27.09:0,27,1087	0/0:14,0:10:1.83:0,2,358	0/0:42,0:20:21.47:0,21,490	0/0:38,0:38:78.27:0,78,2954	1/1:18,6:24:27.09:572,27,0	./.	0/0:28,0:27:39.12:0,39,960	0/0:17,0:17:45.15:0,45,1717	0/0:39,0:39:99:0,105,3593	0/0:26,0:25:49.05:0,49,1984	0/0:14,0:14:33.10:0,33,1332	0/0:21,0:21:57.20:0,57,2379	0/0:25,0:25:69.22:0,69,2438	0/0:29,0:29:54.18:0,54,2168	0/0:25,0:25:66.21:0,66,2723	0/0:25,0:24:57.67:0,58,2250	0/0:16,0:16:36.08:0,36,1096	0/0:22,0:21:42.09:0,42,1113	0/0:28,0:28:60.20:0,60,2358	0/0:24,0:24:36.12:0,36,1338	0/0:18,0:18:42.14:0,42,1371	0/0:23,0:23:44.63:0,45,1768	0/0:32,0:32:69.71:0,70,2801	0/0:27,0:27:60.20:0,60,2491	0/0:40,0:40:84.27:0,84,3056	0/0:28,0:28:78.27:0,78,3332	0/0:16,0:16:45.15:0,45,1580
chr10	46777272	.	C	CAAT	2662.39	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-5.539;DP=817;FS=1.203;HRun=0;HaplotypeScore=140.2171;InbreedingCoeff=0.9993;MQ=87.90;MQ0=0;MQRankSum=-3.803;QD=53.25;ReadPosRankSum=-0.850;VQSLOD=5.1171;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,120,1991	0/0:14,0:14:42.14:0,42,695	0/0:34,0:34:93.23:0,93,1373	0/0:23,0:23:57.17:0,57,918	0/0:17,0:17:45.12:0,45,691	1/1:4,18:23:57.01:1142,57,0	1/1:3,23:27:75.21:1642,75,0	0/0:30,0:30:84.28:0,84,1373	0/0:42,0:42:99:0,120,1970	0/0:25,0:25:72.25:0,72,1198	0/0:13,0:13:33.10:0,33,526	0/0:26,0:26:75.24:0,75,1221	0/0:40,0:40:99:0,114,1812	0/0:38,0:38:99:0,108,1770	0/0:39,0:39:99:0,102,1695	0/0:44,0:44:99:0,129,2149	0/0:34,0:34:99:0,99,1641	0/0:20,0:20:57.05:0,57,834	0/0:18,0:18:48.16:0,48,776	0/0:19,0:19:57.18:0,57,924	0/0:66,0:66:99:0,187,3047	0/0:20,0:20:57.14:0,57,849	0/0:16,0:16:39.13:0,39,650	0/0:46,0:46:99:0,132,2139	0/0:22,0:22:63.22:0,63,1049	0/0:35,0:35:93.32:0,93,1546	0/0:33,0:32:93.27:0,93,1472	0/0:9,0:9:27.09:0,27,450
chr10	46777937	.	C	CA	964.89	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-6.049;DP=565;FS=1.541;HRun=7;HaplotypeScore=55.3846;InbreedingCoeff=0.9606;MQ=73.48;MQ0=1;MQRankSum=1.505;QD=27.57;ReadPosRankSum=0.217;VQSLOD=4.2284;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,117,1114	0/0:6,0:6:15.02:0,15,145	0/0:23,0:18:37.78:0,38,336	0/0:27,0:22:40.20:0,40,442	0/0:12,0:12:30.04:0,30,290	0/0:18,0:18:54.09:0,54,521	0/0:26,0:26:72.11:0,72,695	0/0:26,0:26:66.10:0,66,637	0/0:19,0:19:51.06:0,51,487	1/1:2,23:25:65.97:796,66,0	1/1:2,8:10:24.07:290,24,0	0/0:21,0:21:42.04:0,42,400	0/0:20,0:20:48.07:0,48,463	0/0:20,0:20:51.06:0,51,486	0/0:26,0:26:63.09:0,63,608	0/0:10,0:10:30.04:0,30,284	0/0:31,0:31:80.64:0,81,781	0/0:23,0:23:66.08:0,66,630	0/0:19,0:19:45.06:0,45,430	0/0:24,0:24:63.10:0,63,608	0/0:23,0:23:45.06:0,45,429	0/0:23,0:23:63.10:0,63,608	0/0:15,0:15:36.05:0,36,347	0/0:26,0:25:72.11:0,72,695	0/0:19,0:19:57.09:0,57,550	0/0:16,0:16:27.02:0,27,256	0/0:11,0:11:33.05:0,33,319	0/0:4,0:3:9.01:0,9,87
chr10	46779623	.	CT	C	5610.02	PASS	AB=0.900;AC=34;AF=0.607;AN=56;BaseQRankSum=3.620;DP=699;FS=8.024;HRun=12;HaplotypeScore=84.9374;InbreedingCoeff=0.7249;MQ=71.42;MQ0=0;MQRankSum=-1.677;QD=11.94;ReadPosRankSum=2.267;VQSLOD=4.4623;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:50,6:59:8.43:8,0,1012	0/0:1,0:10:17.04:0,17,86	0/1:13,1:14:19.89:20,0,140	0/1:9,1:10:10.16:10,0,61	1/1:1,14:15:35.83:279,36,0	0/0:4,0:18:34.36:0,34,192	0/0:7,0:27:57.46:0,57,343	1/1:16,33:49:64.37:682,64,0	0/0:32,1:34:57.05:0,57,774	1/1:10,25:37:47.33:519,47,0	1/1:3,10:14:16.89:122,17,0	0/0:27,2:29:19.58:0,20,513	0/1:21,3:25:4.41:4,0,489	1/1:4,20:26:52.78:401,53,0	0/0:5,0:33:63.42:0,63,367	1/1:3,17:21:22.40:347,22,0	1/1:4,22:28:68.85:504,69,0	1/1:4,12:16:30.48:289,30,0	1/1:4,10:15:31.91:238,32,0	1/1:5,20:26:60.76:448,61,0	1/1:8,27:36:64.77:493,65,0	0/0:29,2:31:17.02:0,17,511	0/0:19,0:19:39.06:0,39,386	0/0:25,2:28:22.51:0,23,572	1/1:1,14:18:44.96:318,45,0	1/1:10,21:33:60.76:453,61,0	1/1:3,20:24:54.72:406,55,0	1/1:1,3:4:8.95:70,9,0
chr10	46780269	.	TATC	T	1582.15	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.481;DP=918;FS=1.310;HRun=0;HaplotypeScore=128.5588;InbreedingCoeff=0.9997;MQ=63.40;MQ0=6;MQRankSum=-0.026;QD=24.72;ReadPosRankSum=1.331;VQSLOD=3.9290;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:56:99:0,146,2997	0/0:18,0:18:48.15:0,48,948	0/0:41,0:20:44.30:0,44,707	0/0:44,0:27:54.50:0,54,768	0/0:22,0:22:66.17:0,66,1183	1/1:4,25:28:54.18:843,54,0	1/1:1,34:35:57.11:861,57,0	0/0:43,0:43:99:0,120,1897	0/0:27,0:27:78.24:0,78,1548	0/0:28,0:28:84.15:0,84,1386	0/0:19,0:19:53.93:0,54,903	0/0:31,0:31:93.25:0,93,1779	0/0:26,0:26:72.22:0,72,1432	0/0:43,0:43:99:0,111,2146	0/0:42,0:42:99:0,120,2306	0/0:39,0:39:99:0,111,2266	0/0:40,0:40:99:0,105,2154	0/0:20,0:20:48.14:0,48,884	0/0:33,0:32:96.08:0,96,1623	0/0:27,0:27:75.15:0,75,1222	0/0:79,0:79:99:0,198,3624	0/0:23,0:23:45.62:0,46,896	0/0:21,0:21:63.14:0,63,1107	0/0:44,0:43:99:0,123,2342	0/0:29,0:29:78.21:0,78,1483	0/0:26,0:25:72.22:0,72,1389	0/0:23,0:23:63.16:0,63,1269	0/0:10,0:10:30.10:0,30,649
chr10	46781239	.	T	TA	748.38	PASS	AB=0.576;AC=7;AF=0.125;AN=56;BaseQRankSum=-3.198;DP=536;FS=6.236;HRun=12;HaplotypeScore=58.4590;InbreedingCoeff=0.7257;MQ=64.06;MQ0=1;MQRankSum=-0.521;QD=11.51;ReadPosRankSum=0.311;VQSLOD=2.9990;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:41.76:0,42,293	1/1:1,5:7:11.86:102,12,0	0/0:17,0:8:2.96:0,3,44	0/0:10,0:8:7.75:0,8,48	0/0:24,0:24:59.60:0,60,437	1/1:4,15:19:4.30:205,4,0	0/1:5,14:18:4.75:281,0,5	0/0:31,0:32:65.53:0,66,477	0/0:19,0:19:47.64:0,48,342	0/0:19,0:20:37.75:0,38,268	0/0:19,0:20:46.75:0,47,341	0/0:15,0:14:26.81:0,27,194	0/0:22,0:22:50.70:0,51,371	0/0:17,1:18:12.56:0,13,253	1/1:5,15:19:14.14:294,14,0	0/0:16,1:17:33.77:0,34,277	0/0:24,0:25:55.72:0,56,400	0/0:14,0:12:26.84:0,27,197	0/0:25,0:27:20.58:0,21,287	0/0:23,0:25:60.70:0,61,424	0/0:12,0:12:32.81:0,33,241	0/0:7,0:7:8.74:0,9,65	0/0:14,0:14:32.77:0,33,239	0/0:8,0:8:20.88:0,21,153	0/0:16,0:17:40.80:0,41,290	0/0:33,0:34:70.58:0,71,507	0/0:33,1:36:56.61:0,57,544	0/0:12,0:13:25.85:0,26,181
chr10	46782158	.	TCTCTCC	T	36.10	PASS	AB=1.000;AC=6;AF=0.107;AN=56;BaseQRankSum=4.589;DP=466;FS=0.953;HRun=0;HaplotypeScore=97.7090;InbreedingCoeff=0.3965;MQ=50.81;MQ0=13;MQRankSum=-1.666;QD=0.39;ReadPosRankSum=-0.587;VQSLOD=1.3504;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:18:26.14:0,26,467	0/0:3,0:3:2.04:0,2,6	0/0:13,0:9:13.48:0,13,182	0/0:24,0:12:8.40:0,8,260	0/0:22,0:22:35.77:0,36,771	1/1:5,25:30:2.77:61,3,0	1/1:5,17:20:2.83:57,3,0	0/0:24,0:24:30.38:0,30,895	0/0:11,0:10:20.54:0,21,367	0/0:22,0:20:56.47:0,56,1075	0/0:15,0:15:29.80:0,30,586	0/0:12,0:12:30.94:0,31,486	0/0:13,0:13:15.73:0,16,391	0/0:16,0:16:27.08:0,27,465	0/0:20,0:20:41.96:0,42,315	0/0:21,0:21:15.50:0,15,790	0/0:13,0:13:26.85:0,27,546	0/0:6,0:5:5.99:0,6,86	0/0:16,0:15:38.56:0,39,501	0/0:17,0:15:23.28:0,23,346	0/0:19,0:18:33.02:0,33,694	0/0:11,0:11:21.96:0,22,417	0/0:10,0:9:21.07:0,21,444	0/1:16,0:12:21.85:22,0,216	0/0:19,0:19:42.13:0,42,843	0/1:25,0:23:4.02:4,0,938	0/0:21,0:21:10.46:0,10,780	0/0:6,0:6:11.91:0,12,241
chr10	46782198	.	TCTCTCTCTCC	T	932.86	PASS	AB=0.927;AC=24;AF=0.480;AN=50;BaseQRankSum=-0.321;DP=387;FS=9.768;HRun=0;HaplotypeScore=99.5667;InbreedingCoeff=0.3431;MQ=36.99;MQ0=32;MQRankSum=0.790;QD=5.27;ReadPosRankSum=4.175;VQSLOD=0.7205;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:13,0:11:7.35:7,0,17	0/0:6,0:6:15.90:0,16,110	0/0:26,0:2:5.81:0,6,34	0/0:34,0:3:2.92:0,3,17	./.	0/0:16,0:16:3.13:0,3,11	0/0:10,0:7:8.38:0,8,86	1/1:15,0:14:13.36:89,13,0	0/1:16,0:15:4.50:5,0,65	1/1:12,0:12:28.38:258,28,0	0/0:11,0:10:3.95:0,4,13	0/1:16,0:16:1.85:32,0,2	0/0:12,0:12:1.24:0,1,19	1/1:12,0:12:4.62:39,5,0	0/0:22,0:21:7.12:0,7,45	1/1:14,0:13:7.25:51,7,0	0/1:10,0:10:4.46:17,0,4	1/1:6,0:4:5.92:44,6,0	0/1:8,0:8:15.33:83,0,15	0/1:2,7:7:0:0,0,0	./.	0/0:15,0:15:4.70:0,5,14	0/0:15,0:13:0.36:0,0,1	./.	1/1:8,0:5:2.98:24,3,0	1/1:18,0:16:15.58:273,16,0	1/1:12,0:12:4.37:134,4,0	1/1:8,0:4:5.15:28,5,0
chr10	46782208	.	CCT	C	1063.43	PASS	AB=1.000;AC=25;AF=0.521;AN=48;BaseQRankSum=-1.213;DP=384;FS=1.318;HRun=0;HaplotypeScore=82.7763;InbreedingCoeff=0.5966;MQ=36.93;MQ0=34;MQRankSum=-0.809;QD=6.82;ReadPosRankSum=3.138;VQSLOD=3.2645;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:15,0:12:0.03:0,0,1	0/0:5,0:5:6.02:0,6,75	0/0:38,0:2:5.38:0,5,52	0/0:44,0:6:5.67:0,6,34	./.	0/0:17,0:17:5.95:0,6,43	0/0:10,0:8:6.02:0,6,80	1/1:5,9:13:26.04:284,26,0	0/0:18,0:17:18.11:0,18,189	1/1:7,4:10:16.41:143,16,0	0/0:4,7:10:0:0,0,0	0/0:15,0:15:2.85:0,3,19	0/0:14,0:14:9.16:0,9,75	1/1:7,3:10:2.78:29,3,0	0/0:13,1:14:6.02:0,6,70	1/1:6,8:12:9.48:79,9,0	1/1:5,4:9:5.68:58,6,0	1/1:3,1:2:5.60:43,6,0	1/1:5,5:9:12.02:127,12,0	./.	./.	0/1:14,0:14:0.14:1,0,0	0/1:16,0:14:0.19:0,0,0	./.	1/1:3,5:5:2.74:12,3,0	1/1:9,7:14:28.10:274,28,0	1/1:6,2:8:3.53:76,4,0	1/1:4,3:3:8.99:91,9,0
chr10	46782245	.	TGC	T	1629.28	PASS	AB=0.903;AC=39;AF=0.750;AN=52;BaseQRankSum=1.269;DP=386;FS=9.092;HRun=0;HaplotypeScore=160.0762;InbreedingCoeff=0.3137;MQ=32.58;MQ0=9;MQRankSum=-0.802;QD=5.24;ReadPosRankSum=0.256;VQSLOD=2.7418;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:15,2:15:7.74:8,0,20	1/1:6,0:6:8.83:60,9,0	0/0:20,0:1:2.84:0,3,14	0/1:12,0:4:5.93:6,0,18	0/0:17,3:15:0:0,0,0	1/1:9,8:17:8.72:75,9,0	0/0:3,4:7:0.89:0,1,2	1/1:11,0:11:18.68:121,19,0	1/1:13,5:17:6.75:81,7,0	1/1:17,4:19:14.98:270,15,0	0/1:15,2:16:0:0,0,1	1/1:13,3:15:8.52:49,9,0	1/1:2,10:12:4.63:74,5,0	1/1:13,2:15:5.29:45,5,0	1/1:22,1:22:5.98:49,6,0	1/1:14,7:18:20.12:170,20,0	1/1:7,2:9:10.78:65,11,0	1/1:2,2:4:11.96:102,12,0	1/1:10,0:9:11.45:70,11,0	0/1:16,0:15:0.01:0,0,0	./.	0/0:16,4:20:0.26:0,0,1	0/1:10,6:15:0.19:0,0,0	./.	1/1:6,6:10:2.96:28,3,0	1/1:17,5:20:34.22:367,34,0	1/1:11,0:10:3.01:52,3,0	1/1:4,1:5:0.84:42,1,0
chr10	46782269	.	TGC	T	1537.49	PASS	AB=1.000;AC=32;AF=0.667;AN=48;BaseQRankSum=1.491;DP=341;FS=1.381;HRun=0;HaplotypeScore=238.6745;InbreedingCoeff=0.3111;MQ=31.33;MQ0=1;MQRankSum=-1.287;QD=6.43;ReadPosRankSum=3.261;VQSLOD=2.9020;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:11:3:0,3,27	0/1:3,0:3:1.18:35,0,1	./.	0/0:3,0:1:2.74:0,3,12	0/0:17,0:12:0:0,0,0	1/1:21,0:21:11.64:92,12,0	./.	1/1:6,0:6:8.86:57,9,0	1/1:19,0:18:12.89:114,13,0	1/1:18,0:16:0.22:239,0,0	0/0:18,0:17:0.47:0,0,2	1/1:15,0:14:5.81:34,6,0	1/1:10,0:10:8.96:99,9,0	1/1:14,0:14:8.69:68,9,0	1/1:26,0:25:8.83:63,9,0	1/1:27,0:24:17.98:154,18,0	1/1:8,0:8:11.84:82,12,0	1/1:5,0:5:11.95:101,12,0	1/1:4,0:4:3.47:27,3,0	./.	./.	0/0:17,0:17:0.39:0,0,1	0/1:13,0:12:0:0,0,0	0/0:0,7:7:0:0,0,0	1/1:13,0:11:2.35:27,2,0	1/1:20,0:18:30.36:331,30,0	0/1:7,0:6:0.52:31,0,1	0/1:10,0:10:5.76:87,0,6
chr10	46782270	.	GCA	G	381.67	PASS	AB=0.925;AC=28;AF=0.583;AN=48;BaseQRankSum=-1.004;DP=310;FS=19.172;HRun=0;HaplotypeScore=236.7083;InbreedingCoeff=0.2418;MQ=32.14;MQ0=0;MQRankSum=0.276;QD=1.83;ReadPosRankSum=4.034;VQSLOD=1.0586;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:11,2:11:3.01:0,3,39	1/1:2,0:2:3.11:8,3,0	./.	0/0:3,0:1:2.04:0,2,6	0/0:13,0:11:0:0,0,0	1/1:19,1:20:7.75:58,8,0	./.	0/0:5,0:5:6.80:0,7,42	1/1:12,6:17:6.21:70,6,0	0/1:14,0:14:18.47:46,0,18	0/0:15,0:14:0.47:0,0,2	1/1:12,2:14:2.80:7,3,0	1/1:9,1:10:8.75:73,9,0	1/1:13,0:13:5.83:29,6,0	1/1:25,0:25:2.31:12,2,0	1/1:22,0:21:13.76:48,14,0	1/1:7,0:7:3.39:12,3,0	1/1:5,0:5:5.06:29,5,0	0/0:3,0:3:3.44:0,3,21	./.	./.	0/0:15,2:17:0.39:0,0,1	0/1:11,1:11:0:0,0,0	0/0:7,0:7:0:0,0,0	1/1:12,0:11:1.94:9,2,0	1/1:17,0:16:5.06:47,5,0	0/1:5,2:6:25.72:41,0,26	0/1:10,0:10:14.23:14,0,31
chr10	46782361	.	C	CTT	321.91	PASS	AB=0.759;AC=3;AF=0.054;AN=56;BaseQRankSum=2.386;DP=528;FS=0.768;HRun=0;HaplotypeScore=333.4371;InbreedingCoeff=-0.0656;MQ=39.75;MQ0=2;MQRankSum=-1.378;QD=7.85;ReadPosRankSum=0.204;VQSLOD=2.4298;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:60.81:0,61,525	0/1:2,7:9:17.59:193,0,18	0/0:16,0:5:8.84:0,9,81	0/0:14,0:7:1.39:0,1,106	0/0:23,0:23:56.76:0,57,464	0/0:22,0:22:47.77:0,48,396	0/0:18,0:18:50.83:0,51,420	0/0:9,0:9:4.81:0,5,150	0/0:17,0:17:41.88:0,42,340	0/0:26,0:26:77.31:0,77,560	0/0:22,0:22:41.95:0,42,465	0/0:20,0:20:54.24:0,54,434	0/0:21,0:21:59.73:0,60,485	0/0:12,0:12:33.37:0,33,283	0/1:12,8:20:99:209,0,128	0/0:24,0:24:68.73:0,69,560	0/0:10,0:10:16.96:0,17,182	0/0:15,0:15:33.59:0,34,264	0/0:12,0:12:9.69:0,10,186	0/0:36,0:35:37.29:0,37,640	0/1:12,0:12:17.98:18,0,84	0/0:27,0:27:59.66:0,60,585	0/0:25,0:25:51.85:0,52,546	0/0:19,0:19:41.60:0,42,341	0/0:21,0:21:59.58:0,60,465	0/0:25,0:25:71.49:0,71,541	0/0:19,0:19:53.74:0,54,423	0/0:9,0:9:26.82:0,27,204
chr10	46782362	.	C	CCT	293.78	PASS	AB=0.643;AC=2;AF=0.036;AN=56;BaseQRankSum=-1.556;DP=542;FS=4.161;HRun=0;HaplotypeScore=337.6595;InbreedingCoeff=-0.0335;MQ=39.76;MQ0=2;MQRankSum=-1.141;QD=9.79;ReadPosRankSum=-0.004;VQSLOD=2.8301;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:62.29:0,62,532	0/1:2,7:9:17.63:193,0,18	0/0:16,0:5:9:0,9,110	0/0:14,0:7:5.21:0,5,91	0/0:23,0:23:32.23:0,32,413	0/0:22,0:23:32.04:0,32,367	0/0:20,0:20:33.77:0,34,392	0/0:11,0:10:26.75:0,27,191	0/0:19,0:19:41.86:0,42,340	0/0:27,0:27:77.31:0,77,559	0/0:23,0:23:38.25:0,38,472	0/0:20,0:20:36.85:0,37,421	0/0:21,0:21:57.63:0,58,467	0/0:12,0:12:35.89:0,36,307	0/1:13,8:21:99:189,0,153	0/0:24,0:24:48.88:0,49,527	0/0:11,0:11:26.75:0,27,205	0/0:16,0:16:17.69:0,18,266	0/0:13,0:13:8.66:0,9,179	0/0:37,0:36:92.74:0,93,756	0/0:12,0:12:17.82:0,18,133	0/0:27,0:27:77.69:0,78,629	0/0:25,0:25:66.64:0,67,540	0/0:19,0:19:17.46:0,17,261	0/0:21,0:21:57.05:0,57,440	0/0:25,0:25:68.42:0,68,512	0/0:19,0:19:50.20:0,50,402	0/0:9,0:9:26.92:0,27,212
chr10	46782956	.	T	TACAC	4394.89	PASS	AC=34;AF=0.654;AN=52;BaseQRankSum=-0.145;DP=574;FS=7.139;HRun=0;HaplotypeScore=134.4136;InbreedingCoeff=0.8487;MQ=67.84;MQ0=2;MQRankSum=-1.809;QD=12.07;ReadPosRankSum=-1.288;VQSLOD=3.3769;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:18,5:26:6.01:142,6,0	1/1:1,2:4:3.01:71,3,0	./.	./.	1/1:16,1:28:8.27:126,8,0	0/0:10,0:13:12.01:0,12,145	0/0:14,0:14:15.50:0,16,209	1/1:31,0:31:11.94:169,12,0	0/0:16,0:18:24.07:0,24,352	0/0:27,0:29:4.98:0,5,306	0/0:14,0:14:15.02:0,15,185	0/0:17,0:17:21.06:0,21,308	0/0:15,0:16:18.05:0,18,242	1/1:18,1:22:20.89:326,21,0	1/1:13,7:26:24.04:473,24,0	1/1:10,0:20:14.73:88,15,0	1/1:14,11:30:30.57:672,31,0	1/1:11,5:19:15.05:353,15,0	1/1:17,0:19:15.05:264,15,0	1/1:21,0:21:12.01:187,12,0	1/1:17,0:17:3.01:51,3,0	0/0:23,0:23:28.89:0,29,393	1/1:12,0:22:9.80:47,10,0	0/0:23,0:23:21.07:0,21,326	1/1:11,4:16:12.04:283,12,0	1/1:15,8:26:18.02:515,18,0	1/1:16,0:18:15.94:235,16,0	1/1:9,7:17:18.06:392,18,0
chr10	46784148	.	A	AGCAGGAACTGGAG	17782.97	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-3.007;DP=863;FS=0.000;HRun=0;HaplotypeScore=283.7776;InbreedingCoeff=0.9502;MQ=56.61;MQ0=0;MQRankSum=-10.753;QD=38.41;ReadPosRankSum=-7.134;VQSLOD=2.5624;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:73.71:0,74,2305	0/0:9,0:9:18.06:0,18,621	0/0:18,0:14:4.75:0,5,125	0/0:19,0:13:12.03:0,12,264	1/1:28,7:36:10.21:395,10,0	0/0:26,0:26:36.09:0,36,956	0/0:31,0:31:60.19:0,60,1937	1/1:30,0:33:54.16:1412,54,0	0/0:41,0:41:66.23:0,66,2279	1/1:20,13:35:51.07:1446,51,0	1/1:17,9:28:21.03:834,21,0	0/0:43,0:43:81.28:0,81,2910	0/0:29,0:29:75.24:0,75,2551	1/1:17,15:40:26.62:1561,27,0	0/0:41,0:41:87.28:0,87,3002	1/1:28,17:48:42.14:2028,42,0	1/1:16,6:24:17.91:750,18,0	1/1:8,7:16:27.09:1556,27,0	1/1:16,5:20:17.85:485,18,0	1/1:16,7:24:23.56:1119,24,0	1/1:55,0:55:51.11:1028,51,0	0/0:27,0:27:27.07:0,27,709	0/0:27,0:27:30.02:0,30,760	0/0:35,0:35:66.23:0,66,2259	1/1:19,11:31:15.05:942,15,0	1/1:18,9:30:39.13:1590,39,0	1/1:23,12:36:51.17:2400,51,0	1/1:6,0:6:6.02:238,6,0
chr10	46788667	.	CA	C	3425.53	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=13.545;DP=829;FS=1.836;HRun=2;HaplotypeScore=135.8818;InbreedingCoeff=0.9997;MQ=84.87;MQ0=0;MQRankSum=-3.781;QD=36.06;ReadPosRankSum=4.376;VQSLOD=3.1888;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,150,2225	1/1:0,18:18:51.12:643,51,0	0/0:28,0:28:78.21:0,78,1090	0/0:23,0:23:66.17:0,66,942	0/0:23,0:23:69.21:0,69,994	1/1:0,28:28:78.19:991,78,0	1/1:0,14:14:42.14:544,42,0	0/0:26,0:26:75.24:0,75,1089	0/0:34,0:34:99:0,102,1528	0/0:35,0:35:99:0,105,1557	0/0:10,0:10:27.09:0,27,405	0/0:39,0:39:99:0,114,1649	0/0:29,0:29:87.29:0,87,1302	0/0:35,0:35:99:0,102,1527	1/1:0,35:35:99:1247,99,0	0/0:37,0:37:99:0,108,1581	0/0:41,0:41:99:0,120,1794	0/0:33,0:33:93.28:0,93,1335	0/0:24,0:24:68.56:0,69,954	0/0:22,0:22:66.21:0,66,954	0/0:78,0:78:99:0,223,3265	0/0:32,0:32:90.24:0,90,1273	0/0:19,0:19:57.19:0,57,853	0/0:32,0:32:96.33:0,96,1439	0/0:30,0:30:90.27:0,90,1304	0/0:25,0:25:71.97:0,72,1043	0/0:16,0:16:45.15:0,45,674	0/0:12,0:12:36.10:0,36,518
chr10	46790233	.	TCC	T	1466.13	PASS	AB=0.964;AC=34;AF=0.654;AN=52;BaseQRankSum=-1.845;DP=427;FS=2.296;HRun=3;HaplotypeScore=103.2372;InbreedingCoeff=-0.0463;MQ=38.92;MQ0=48;MQRankSum=-0.905;QD=3.90;ReadPosRankSum=2.192;VQSLOD=-0.1701;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:31,0:25:22.25:149,22,0	1/1:3,0:2:2.92:23,3,0	./.	./.	0/0:10,0:8:8.73:0,9,66	1/1:9,0:8:11.70:84,12,0	0/0:20,0:16:6.41:0,6,62	1/1:24,0:34:37.13:207,37,0	0/1:21,0:19:48.88:49,0,89	0/1:27,0:23:62.45:86,0,62	0/0:6,0:6:0:0,0,0	0/1:13,0:12:26.06:31,0,26	0/1:12,0:9:5.32:52,0,5	0/1:15,1:16:21.39:55,0,21	1/1:7,0:7:11.73:86,12,0	0/1:18,0:18:13.96:14,0,19	0/1:18,0:14:27.91:82,0,28	1/1:19,2:20:7.99:272,8,0	1/1:9,0:4:8.69:52,9,0	1/1:9,0:7:2.80:16,3,0	1/1:8,14:19:5.35:90,5,0	1/1:11,0:11:3.77:24,4,0	1/1:9,0:9:5.51:27,6,0	0/0:15,0:13:11.01:0,11,53	0/1:14,0:12:14.14:14,0,37	0/1:17,0:26:44.01:112,0,44	1/1:2,14:15:3.35:47,3,0	0/1:24,0:16:46.42:46,0,75
chr10	46790241	.	TCC	T	1419.16	PASS	AB=0.948;AC=30;AF=0.577;AN=52;BaseQRankSum=-0.604;DP=427;FS=1.371;HRun=3;HaplotypeScore=107.6544;InbreedingCoeff=-0.0228;MQ=40.10;MQ0=50;MQRankSum=0.650;QD=3.88;ReadPosRankSum=0.644;VQSLOD=-0.4198;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:18:12.73:74,13,0	0/0:4,0:3:5.29:0,5,18	./.	./.	0/1:11,1:10:13.01:13,0,55	1/1:12,0:12:11.24:103,11,0	1/1:18,0:14:13.82:95,14,0	1/1:35,0:29:34.78:205,35,0	0/1:20,0:17:2.84:58,0,3	0/1:25,0:20:76.80:124,0,77	1/1:7,0:7:4.60:29,5,0	1/1:16,0:14:9.92:90,10,0	0/1:14,0:11:3.90:58,0,4	0/0:11,0:11:5.23:0,5,27	0/1:8,0:8:24.30:35,0,24	0/1:5,11:16:26.34:34,0,26	0/1:16,1:13:29.91:77,0,30	0/1:22,1:21:25.95:154,0,26	0/1:7,0:4:19.87:20,0,26	0/0:12,0:10:11.98:0,12,123	0/1:22,0:19:0.58:1,0,39	1/1:12,0:12:12.10:78,12,0	1/1:12,0:12:9.13:53,9,0	1/1:17,0:16:10.13:94,10,0	0/1:21,0:19:36.73:130,0,37	0/1:25,1:23:53.50:53,0,76	0/0:13,0:12:3.50:0,3,38	0/0:21,0:15:0.89:0,1,167
chr10	46790260	.	C	CTG	1144.69	PASS	AB=0.869;AC=12;AF=0.214;AN=56;BaseQRankSum=0.179;DP=469;FS=0.656;HRun=0;HaplotypeScore=100.9447;InbreedingCoeff=0.5334;MQ=47.31;MQ0=45;MQRankSum=0.887;QD=8.12;ReadPosRankSum=3.092;VQSLOD=3.3911;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:32,4:29:8.36:335,0,8	0/0:5,0:4:12:0,12,126	0/0:5,0:2:3.45:0,3,22	0/0:12,0:4:10.27:0,10,56	0/0:18,0:14:24.33:0,24,249	0/0:19,0:19:46.22:0,46,337	0/0:15,0:10:2.63:0,3,23	0/0:26,0:20:49.37:0,49,349	1/1:17,1:16:8.86:166,9,0	0/0:26,0:21:43.11:0,43,510	0/0:8,0:8:15.42:0,15,121	1/1:4,10:12:9.03:136,9,0	0/1:4,11:13:16.69:110,0,17	0/0:11,0:11:17.74:0,18,159	0/0:13,0:13:35.48:0,35,291	0/1:13,0:13:1.68:2,0,86	0/0:21,0:17:37.24:0,37,319	0/0:19,0:16:35.45:0,35,285	0/0:7,0:6:16.23:0,16,164	0/0:18,0:17:32.71:0,33,357	0/0:23,0:20:11.99:0,12,126	1/1:13,5:18:32.91:337,33,0	1/1:1,12:13:9.03:150,9,0	0/1:14,0:14:6.35:69,0,6	0/0:24,0:23:38.73:0,39,383	0/0:22,0:20:48.72:0,49,414	0/0:14,0:14:21.03:0,21,190	0/0:22,0:15:31.54:0,32,315
chr10	46792592	.	A	AT	16334.20	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=20.735;DP=717;FS=3.194;HRun=0;HaplotypeScore=167.5563;InbreedingCoeff=0.9948;MQ=89.30;MQ0=0;MQRankSum=-6.285;QD=38.25;ReadPosRankSum=2.278;VQSLOD=4.3473;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,132,1802	1/1:0,9:9:27.09:372,27,0	0/0:25,0:25:69.14:0,69,919	0/0:36,0:36:91.96:0,92,1119	1/1:0,12:12:29.97:347,30,0	1/1:0,25:25:72.20:994,72,0	1/1:0,43:43:99:1637,120,0	1/1:0,27:27:81.22:1069,81,0	0/0:34,0:34:99:0,102,1405	1/1:0,21:21:63.16:842,63,0	1/1:0,5:5:12:144,12,0	0/0:30,0:30:90.30:0,90,1256	0/0:36,0:36:99:0,108,1508	1/1:0,32:32:93.31:1299,93,0	1/1:0,28:28:81.27:1157,81,0	1/1:0,26:27:78.26:1079,78,0	1/1:0,37:37:99:1412,99,0	1/1:0,14:14:33.11:465,33,0	1/1:0,17:17:51.11:652,51,0	1/1:0,20:20:57.19:793,57,0	1/1:0,26:26:75.25:1059,75,0	0/0:22,0:22:66.22:0,66,915	0/0:21,0:21:63.21:0,63,880	0/0:41,0:41:99:0,123,1701	1/1:0,18:18:48.12:643,48,0	1/1:0,26:26:78.18:1030,78,0	1/1:1,24:24:60.19:838,60,0	1/1:0,15:15:36.12:502,36,0
chr10	46793222	.	AAAAAC	A	1056.44	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.990;DP=736;FS=0.000;HRun=0;HaplotypeScore=127.1372;InbreedingCoeff=0.9758;MQ=58.85;MQ0=6;MQRankSum=0.692;QD=23.48;ReadPosRankSum=1.684;VQSLOD=3.4846;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:90.24:0,90,2378	1/1:3,7:10:15.05:280,15,0	0/0:14,0:8:18.06:0,18,419	0/0:20,0:12:18.53:0,19,442	0/0:39,1:40:19.31:0,19,1941	0/0:25,0:25:51.16:0,51,1299	0/0:25,0:25:60.19:0,60,1617	0/0:24,0:22:42.14:0,42,1189	0/0:28,0:28:72.25:0,72,1968	0/0:26,0:26:54.19:0,54,1535	0/0:29,0:29:72.25:0,72,2011	0/0:20,0:20:51.18:0,51,1457	0/0:31,0:31:63.22:0,63,1767	0/0:21,0:21:51.17:0,51,1379	1/1:14,21:35:48.16:895,48,0	0/0:27,0:27:72.25:0,72,2019	0/0:40,0:39:90.29:0,90,2409	0/0:29,0:29:51.17:0,51,1382	0/0:23,0:21:24.05:0,24,587	0/0:40,0:40:84.26:0,84,2197	0/0:25,0:25:49.41:0,49,1340	0/0:21,0:21:60.21:0,60,1682	0/0:25,0:25:66.21:0,66,1777	0/0:19,0:20:46.40:0,46,1192	0/0:27,0:27:60.21:0,60,1720	0/0:31,0:31:78.27:0,78,2217	0/0:33,0:33:78.25:0,78,2120	0/0:9,0:9:18.06:0,18,516
chr10	46794501	.	A	AC	35039.97	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-10.901;DP=839;FS=0.000;HRun=1;HaplotypeScore=69.1305;InbreedingCoeff=0.9994;MQ=85.39;MQ0=0;MQRankSum=-11.946;QD=44.81;ReadPosRankSum=7.212;VQSLOD=3.6478;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,49:48:99:2110,132,0	1/1:0,10:10:27.09:431,27,0	0/0:28,0:28:81.18:0,81,1094	0/0:28,0:29:84.06:0,84,1128	1/1:0,22:22:60.20:955,60,0	1/1:0,32:32:93.32:1487,93,0	1/1:0,29:29:78.27:1247,78,0	1/1:2,44:46:99:1981,132,0	1/1:1,30:31:84.29:1343,84,0	1/1:1,22:23:66.21:1031,66,0	1/1:1,22:23:60.20:959,60,0	1/1:0,44:44:99:1966,123,0	1/1:0,33:33:93.32:1486,93,0	1/1:0,32:32:93.32:1485,93,0	1/1:0,36:36:99:1679,105,0	1/1:0,49:49:99:2254,141,0	1/1:0,26:26:72.25:1151,72,0	1/1:0,14:14:42.14:671,42,0	1/1:1,23:24:72.08:1116,72,0	1/1:0,27:27:81.28:1295,81,0	1/1:1,57:58:99:2542,160,0	1/1:0,27:27:75.26:1199,75,0	1/1:0,18:18:54.18:863,54,0	1/1:0,27:27:78.27:1247,78,0	1/1:0,14:15:42.14:658,42,0	1/1:1,33:34:99:1581,99,0	1/1:0,30:30:84.29:1343,84,0	1/1:0,23:23:60.20:959,60,0
chr10	46796609	.	A	AC	5209.88	PASS	AB=0.593;AC=21;AF=0.375;AN=56;BaseQRankSum=-9.045;DP=559;FS=11.536;HRun=8;HaplotypeScore=88.8604;InbreedingCoeff=0.9383;MQ=79.89;MQ0=0;MQRankSum=-0.342;QD=22.85;ReadPosRankSum=1.723;VQSLOD=4.5912;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,23:32:38.73:700,39,0	0/0:12,0:12:30:0,30,269	0/0:20,0:20:23.99:0,24,316	0/0:18,0:18:7.39:0,7,184	0/0:21,0:21:51.02:0,51,467	0/0:23,0:23:54.02:0,54,494	0/0:28,0:28:71.97:0,72,637	0/0:16,0:16:14.98:0,15,137	1/1:4,14:18:30.09:342,30,0	0/0:18,0:18:42.01:0,42,382	0/0:13,0:13:39.02:0,39,357	1/1:4,15:19:42.12:482,42,0	1/1:4,17:21:22.89:462,23,0	0/0:18,0:18:54.02:0,54,490	0/0:29,0:29:81.02:0,81,737	0/0:26,0:26:72.01:0,72,653	0/0:28,0:28:77.08:0,77,692	0/0:22,0:22:63.03:0,63,577	1/1:7,13:20:39.12:450,39,0	0/1:5,11:16:0.39:250,0,0	1/1:3,21:24:29.70:596,30,0	1/1:2,17:19:36.11:416,36,0	1/1:2,14:16:33.10:381,33,0	1/1:5,23:28:63.17:716,63,0	0/0:11,0:11:27.01:0,27,247	0/0:12,0:12:33.01:0,33,302	1/1:2,13:15:36.11:415,36,0	0/0:16,0:16:9.68:0,10,295
chr10	46797308	.	GAGCTTGTTTCCAT	G	17981.07	PASS	AB=0.567;AC=21;AF=0.375;AN=56;BaseQRankSum=18.856;DP=742;FS=6.258;HRun=0;HaplotypeScore=278.0114;InbreedingCoeff=0.9144;MQ=75.20;MQ0=0;MQRankSum=-17.059;QD=82.48;ReadPosRankSum=2.224;VQSLOD=3.9190;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,123,7509	0/0:18,0:18:48.16:0,48,2931	0/0:25,0:25:66.23:0,66,3927	0/0:20,0:20:60.18:0,60,2862	1/1:5,12:17:33.11:1169,33,0	0/0:25,0:25:72.25:0,72,4638	0/0:30,0:30:81.28:0,81,4762	1/1:10,20:30:60.17:1958,60,0	0/0:27,0:27:81.28:0,81,4684	1/1:1,20:21:60.21:2265,60,0	1/1:3,15:18:42.14:1595,42,0	0/0:35,0:35:99:0,102,6370	0/0:28,0:28:81.28:0,81,5099	1/1:7,25:32:72.25:2849,72,0	0/0:50,0:50:99:0,141,9075	1/1:6,29:35:81.28:3207,81,0	1/1:4,15:18:30.10:1188,30,0	1/1:4,4:7:9.03:357,9,0	0/0:22,0:22:63.22:0,63,3611	0/0:29,0:29:84.29:0,84,5227	0/0:47,0:47:99:0,135,8251	0/0:31,0:31:90.31:0,90,5766	0/0:23,0:23:69.24:0,69,4289	0/0:34,0:34:96.32:0,96,5859	1/1:2,11:13:30.10:1125,30,0	0/1:4,13:17:99:1437,0,155	0/0:37,0:37:99:0,111,6508	1/1:1,7:8:21.07:832,21,0
chr10	46798556	.	G	GT	837.54	PASS	AB=0.844;AC=18;AF=0.321;AN=56;BaseQRankSum=-4.067;DP=557;FS=6.913;HRun=15;HaplotypeScore=81.3750;InbreedingCoeff=0.1623;MQ=69.94;MQ0=1;MQRankSum=-0.982;QD=2.87;ReadPosRankSum=-1.278;VQSLOD=-0.1396;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:23,18:46:1.37:249,1,0	0/0:11,0:11:20.53:0,21,125	0/0:21,1:12:1.19:0,1,5	0/1:12,0:9:10.19:10,0,14	0/1:20,3:26:13.79:14,0,130	0/0:10,0:23:28.24:0,28,100	0/0:5,0:11:10.13:0,10,29	0/0:22,0:24:26:0,26,192	1/1:5,14:19:2.97:131,3,0	0/1:14,1:18:24.11:24,0,80	0/0:11,0:13:17.95:0,18,100	1/1:6,16:22:8.92:178,9,0	0/1:13,6:20:44.92:59,0,45	0/0:15,0:15:9.05:0,9,55	0/0:18,0:21:26.71:0,27,154	0/1:14,2:17:12.96:13,0,148	0/0:30,1:33:34.97:0,35,309	0/1:23,3:30:14.52:15,0,232	0/0:6,0:18:19.46:0,19,71	0/0:7,0:19:30.03:0,30,125	0/0:10,0:24:26.33:0,26,84	1/1:6,6:14:11.46:110,11,0	0/1:7,12:20:0.88:126,0,1	0/1:7,6:14:6.18:53,0,6	0/0:13,0:18:27.70:0,28,137	0/1:19,2:22:16.03:16,0,133	0/0:4,0:13:18.27:0,18,53	0/1:9,2:11:1.72:2,0,102
chr10	46802351	.	GA	G	2443.98	PASS	AB=0.679;AC=24;AF=0.429;AN=56;BaseQRankSum=4.121;DP=544;FS=1.347;HRun=13;HaplotypeScore=60.7731;InbreedingCoeff=0.2417;MQ=55.54;MQ0=38;MQRankSum=2.032;QD=8.01;ReadPosRankSum=0.595;VQSLOD=2.4892;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:50:77.61:0,78,788	0/1:2,1:3:12.89:13,0,49	0/0:11,0:4:1.74:0,2,30	0/1:19,0:7:6.89:7,0,88	1/1:7,15:22:5.58:195,6,0	0/0:16,1:21:18.77:0,19,321	0/0:23,2:26:15.82:0,16,366	1/1:10,18:26:55.60:392,56,0	0/0:8,0:7:8.97:0,9,78	0/1:5,9:13:2:110,0,2	1/1:4,9:15:3.05:140,3,0	0/0:18,1:19:27.02:0,27,360	0/0:15,0:15:35.99:0,36,332	1/1:4,9:12:17.88:131,18,0	0/0:16,7:23:1.06:0,1,307	1/1:3,15:16:26.84:197,27,0	1/1:12,14:31:1.85:250,2,0	0/1:5,12:18:35.38:146,0,35	0/1:10,10:16:25.52:161,0,26	0/1:10,9:19:3.42:142,0,3	0/1:10,8:18:32.77:111,0,33	0/0:13,3:15:24.04:0,24,233	0/0:10,1:8:11.91:0,12,96	0/0:32,1:34:74.76:0,75,687	0/1:2,8:12:0.21:152,0,0	0/1:10,12:23:29.95:218,0,30	1/1:7,7:14:22.87:159,23,0	0/1:4,5:10:9.24:95,0,9
chr10	46802433	.	G	GTCT	3475.98	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=10.249;DP=565;FS=20.223;HRun=0;HaplotypeScore=84.3234;InbreedingCoeff=0.9705;MQ=66.43;MQ0=0;MQRankSum=-4.894;QD=37.38;ReadPosRankSum=3.149;VQSLOD=2.9093;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,20:28:48.16:995,48,0	0/0:7,0:7:21.07:0,21,309	0/0:14,0:14:30.06:0,30,402	0/0:10,0:10:19.30:0,19,264	0/0:29,0:29:78.25:0,78,1130	0/0:20,0:20:54.18:0,54,795	0/0:15,0:15:39.09:0,39,550	0/0:34,0:34:69.23:0,69,1015	1/1:2,11:12:27.09:559,27,0	0/0:21,0:21:57.16:0,57,800	0/0:28,0:28:72.24:0,72,1059	1/1:4,7:11:18.06:372,18,0	1/1:4,8:13:21.07:435,21,0	0/0:13,0:13:36.12:0,36,530	0/0:28,0:28:75.24:0,75,1085	0/0:18,0:18:45.15:0,45,662	0/0:31,0:31:78.19:0,78,1077	0/0:17,0:17:33.11:0,33,486	0/0:29,0:29:57.18:0,57,819	0/0:34,0:34:87.29:0,87,1281	0/0:20,0:20:54.16:0,54,774	1/1:0,4:4:12.04:248,12,0	1/1:2,3:5:6.02:124,6,0	1/1:5,12:19:36.09:743,36,0	0/0:28,0:28:72.24:0,72,1060	0/0:33,0:33:90.25:0,90,1282	0/0:28,0:28:69.23:0,69,1014	0/0:15,0:15:33.11:0,33,486
chr10	46805294	.	GGAA	G	552.41	PASS	AB=0.942;AC=25;AF=0.521;AN=48;BaseQRankSum=-0.127;DP=219;FS=0.000;HRun=0;HaplotypeScore=44.4010;InbreedingCoeff=-0.0191;MQ=24.14;MQ0=31;MQRankSum=-0.279;QD=3.54;ReadPosRankSum=-0.662;VQSLOD=0.8924;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:9,2:8:17.88:74,0,18	0/0:8,0:5:7.31:0,7,106	./.	./.	1/1:8,0:4:2.60:10,3,0	0/0:17,0:13:17.97:0,18,258	0/0:10,0:8:24.08:0,24,403	0/1:13,2:10:70:70,0,114	1/1:4,1:4:8.93:75,9,0	0/1:7,1:8:44.88:45,0,76	0/0:3,0:3:5.93:0,6,52	0/1:9,1:9:39.15:45,0,39	1/1:1,3:3:8.82:72,9,0	1/1:5,0:3:1.23:3,1,0	0/0:7,1:5:8.56:0,9,88	1/1:4,0:4:5.94:44,6,0	1/1:5,2:6:11.82:107,12,0	0/1:7,0:3:16.30:16,0,25	0/1:8,0:6:7.92:8,0,28	0/1:13,0:9:28.93:53,0,29	./.	1/1:4,2:4:5.91:38,6,0	0/1:4,1:5:11.33:11,0,38	0/1:11,0:7:2.65:3,0,15	./.	0/1:11,0:5:11.16:13,0,11	0/1:18,0:10:19.63:20,0,21	0/0:11,0:10:9.57:0,10,88
chr10	46807232	.	CA	C	6701.94	PASS	AB=0.832;AC=41;AF=0.732;AN=56;BaseQRankSum=8.135;DP=702;FS=7.945;HRun=14;HaplotypeScore=118.6185;InbreedingCoeff=0.7164;MQ=59.25;MQ0=7;MQRankSum=-3.813;QD=11.54;ReadPosRankSum=0.640;VQSLOD=3.5238;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,22:35:64.63:450,65,0	0/0:13,2:15:35.98:0,36,319	0/1:19,1:14:8.71:9,0,72	0/0:18,0:10:3.94:0,4,45	1/1:8,27:38:19.83:450,20,0	1/1:4,14:18:47.53:326,48,0	1/1:6,21:27:65.42:452,65,0	1/1:12,14:29:13.80:215,14,0	1/1:5,19:24:62.37:430,62,0	1/1:5,18:26:46.85:320,47,0	1/1:2,14:19:39.24:244,39,0	1/1:4,20:24:65.36:446,65,0	1/1:10,19:28:56.39:390,56,0	1/1:10,11:21:26.62:184,27,0	0/0:28,4:33:16.23:0,16,557	1/1:10,24:36:35.09:373,35,0	1/1:8,13:23:51.46:338,51,0	1/1:8,20:30:48.90:309,49,0	0/0:19,0:20:32.87:0,33,293	0/1:23,4:27:13.70:14,0,300	0/0:12,0:14:8.27:0,8,162	1/1:10,16:24:44.37:308,44,0	1/1:5,29:34:89.07:609,89,0	1/1:12,9:21:27.03:183,27,0	1/1:5,20:26:11.63:291,12,0	0/1:16,14:30:2.10:243,0,2	0/0:14,0:20:19.08:0,19,210	1/1:6,6:15:20.45:119,20,0
chr10	46807259	.	C	CAA	7209.75	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=9.038;DP=676;FS=1.117;HRun=7;HaplotypeScore=124.6968;InbreedingCoeff=0.9984;MQ=60.70;MQ0=11;MQRankSum=-11.965;QD=30.68;ReadPosRankSum=1.306;VQSLOD=4.0251;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,26:33:63.39:929,63,0	0/0:17,0:17:33.01:0,33,381	0/0:29,0:16:38.98:0,39,372	0/0:28,0:16:26.25:0,26,281	0/0:32,0:32:84.20:0,84,958	1/1:1,20:21:57.06:826,57,0	1/1:6,17:24:45.15:728,45,0	0/0:23,0:23:54.13:0,54,611	1/1:10,15:25:42.13:666,42,0	0/0:24,0:24:57.16:0,57,664	0/0:24,0:23:54.15:0,54,625	1/1:3,25:30:69.24:1130,69,0	1/1:6,20:26:60.20:982,60,0	0/0:24,0:24:51.13:0,51,593	0/0:34,0:34:71.16:0,71,842	0/0:37,0:37:90.22:0,90,1032	0/0:26,0:26:69.20:0,69,803	0/0:22,0:22:45.72:0,46,538	0/0:14,0:14:30.07:0,30,340	0/0:20,0:20:39.10:0,39,452	0/0:13,0:13:21.04:0,21,245	1/1:5,19:22:54.01:736,54,0	1/1:5,26:31:65.61:800,66,0	1/1:5,14:19:27.05:413,27,0	0/0:24,0:24:57.13:0,57,652	0/0:24,0:23:63.17:0,63,723	0/0:16,0:16:27.03:0,27,292	0/0:10,0:10:24.06:0,24,279
chr10	46807732	.	AG	A	11986.42	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=2.344;DP=615;FS=15.496;HRun=8;HaplotypeScore=72.8728;InbreedingCoeff=0.9891;MQ=77.84;MQ0=0;MQRankSum=-4.631;QD=22.87;ReadPosRankSum=4.701;VQSLOD=3.9722;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,27:31:69.11:666,69,0	0/0:6,0:6:17.99:0,18,178	0/0:25,1:25:27.24:0,27,483	0/0:31,1:28:26.84:0,27,635	1/1:2,14:16:39.06:376,39,0	1/1:0,23:23:60.10:578,60,0	1/1:1,24:25:69.11:666,69,0	1/1:3,15:19:47.09:435,47,0	1/1:5,15:20:42.06:406,42,0	1/1:2,15:17:44.93:416,45,0	1/1:1,9:10:24.04:232,24,0	1/1:1,27:28:66.07:637,66,0	1/1:5,17:22:39.53:377,40,0	1/1:4,14:18:39.06:377,39,0	0/0:27,0:27:69.20:0,69,824	1/1:0,26:26:72.12:695,72,0	1/1:4,55:59:99:1449,150,0	1/1:5,24:29:60.09:579,60,0	1/1:4,9:13:27:247,27,0	1/1:1,12:13:33.05:318,33,0	1/1:4,32:36:84.13:811,84,0	1/1:1,20:21:54.09:521,54,0	1/1:2,12:14:27.04:260,27,0	1/1:3,33:36:93.14:898,93,0	1/1:1,8:9:18.02:174,18,0	1/1:3,20:23:54.07:521,54,0	1/1:0,7:7:18.03:174,18,0	1/1:1,8:9:18.03:174,18,0
chr10	46808287	.	TA	T	3031.63	PASS	AB=0.579;AC=17;AF=0.304;AN=56;BaseQRankSum=9.397;DP=639;FS=2.427;HRun=12;HaplotypeScore=76.5350;InbreedingCoeff=0.8613;MQ=68.94;MQ0=1;MQRankSum=-0.562;QD=15.79;ReadPosRankSum=3.175;VQSLOD=4.8095;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,24:29:65.96:533,66,0	0/0:5,0:5:12.02:0,12,122	0/0:20,1:16:14.46:0,14,158	0/0:26,0:17:16.22:0,16,95	0/0:21,0:21:45.05:0,45,442	0/1:6,16:22:24.98:335,0,25	1/1:4,16:20:47.81:372,48,0	0/0:33,3:36:17.81:0,18,718	1/1:4,14:18:33.23:314,33,0	0/0:24,0:24:63.08:0,63,625	0/0:22,0:22:57.07:0,57,564	1/1:4,18:22:44.82:348,45,0	1/1:4,18:22:23.34:364,23,0	0/0:21,0:22:60.12:0,60,608	0/0:25,1:26:48.90:0,49,671	0/0:16,1:18:27.65:0,28,432	0/0:32,2:34:31.60:0,32,722	0/0:27,0:29:71.98:0,72,714	0/0:18,0:17:12.81:0,13,293	0/0:21,3:27:1.94:0,2,511	0/0:11,0:12:23.19:0,23,256	1/1:2,10:14:30.96:221,31,0	1/1:2,12:15:37.54:281,38,0	1/1:3,25:30:41.47:471,41,0	0/0:25,3:29:11.31:0,11,639	0/0:24,2:28:25.32:0,25,582	0/0:22,1:23:33.84:0,34,515	0/0:21,2:23:16.60:0,17,511
chr10	46808461	.	TA	T	1573.68	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=9.216;DP=739;FS=2.504;HRun=11;HaplotypeScore=81.1735;InbreedingCoeff=0.9673;MQ=67.11;MQ0=10;MQRankSum=0.007;QD=16.22;ReadPosRankSum=1.641;VQSLOD=4.5772;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:41,2:45:61.02:0,61,1045	0/0:8,0:8:18.05:0,18,192	0/0:47,1:19:20.42:0,20,203	0/0:42,0:15:22.64:0,23,178	0/0:30,0:31:66:0,66,685	0/0:20,0:20:45.11:0,45,479	0/0:19,0:20:53.94:0,54,529	0/0:33,0:33:72.65:0,73,768	0/0:21,0:20:29.85:0,30,519	0/0:32,0:32:72.18:0,72,767	0/0:15,0:15:39.10:0,39,416	0/0:22,0:22:64.03:0,64,666	0/0:18,2:21:7.60:0,8,444	0/0:27,0:27:69.14:0,69,708	0/0:30,0:30:75.17:0,75,790	0/0:25,2:27:21.74:0,22,600	0/0:31,0:32:86.92:0,87,874	0/0:23,0:23:65.96:0,66,683	1/1:8,15:23:17.97:337,18,0	1/1:5,29:34:47.64:584,48,0	1/1:0,9:9:23.97:197,24,0	0/0:15,0:15:25.10:0,25,363	0/0:26,1:28:16.92:0,17,581	0/0:25,0:26:68.99:0,69,709	0/0:28,0:28:75.19:0,75,798	0/0:28,0:29:81.03:0,81,839	1/1:6,24:30:74.89:615,75,0	0/0:17,0:17:40.63:0,41,411
chr10	46809234	.	T	TG	13548.64	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-14.764;DP=745;FS=2.294;HRun=2;HaplotypeScore=71.1073;InbreedingCoeff=0.9976;MQ=84.78;MQ0=0;MQRankSum=-5.307;QD=37.64;ReadPosRankSum=2.208;VQSLOD=5.6388;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,36:37:96.32:1378,96,0	0/0:9,0:9:27.08:0,27,335	0/0:28,0:28:71.11:0,71,895	0/0:24,0:24:59.52:0,60,681	0/0:32,0:32:87.27:0,87,1077	1/1:0,21:21:63.21:903,63,0	1/1:0,34:34:90.30:1288,90,0	0/0:35,0:35:90.27:0,90,1104	1/1:1,18:19:45.15:644,45,0	0/0:23,0:23:66.20:0,66,810	0/0:16,0:16:48.15:0,48,595	1/1:1,26:28:72.24:1033,72,0	1/1:0,25:25:69.23:992,69,0	0/0:27,1:28:31.99:0,32,809	0/0:37,0:37:99:0,111,1376	0/0:28,0:28:84.25:0,84,1028	0/0:38,0:38:99:0,114,1413	0/0:26,0:26:78.22:0,78,952	1/1:2,18:20:54.16:757,54,0	1/1:0,23:23:66.22:950,66,0	1/1:0,44:44:99:1593,111,0	1/1:2,21:23:60.12:828,60,0	1/1:1,21:22:53.90:773,54,0	1/1:2,36:38:99:1468,102,0	0/0:25,0:25:63.20:0,63,779	0/0:31,0:31:81.22:0,81,967	1/1:3,23:26:66.22:942,66,0	0/0:5,0:5:15.05:0,15,186
chr10	46809686	.	AG	A	2613.22	PASS	AB=0.948;AC=25;AF=0.446;AN=56;BaseQRankSum=-0.960;DP=422;FS=1.669;HRun=11;HaplotypeScore=66.0011;InbreedingCoeff=0.6546;MQ=73.32;MQ0=1;MQRankSum=2.423;QD=11.41;ReadPosRankSum=7.478;VQSLOD=2.9046;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:16:15.19:0,15,111	0/0:3,0:3:3:0,3,25	0/0:15,0:13:3.45:0,3,74	0/1:12,1:13:21.56:22,0,159	1/1:6,9:19:32.10:220,32,0	0/0:12,0:12:17.83:0,18,146	0/0:16,0:24:24.61:0,25,223	1/1:7,8:17:22.02:156,22,0	0/0:10,0:12:13.65:0,14,91	1/1:2,8:11:23:178,23,0	1/1:1,6:7:14.97:123,15,0	0/0:9,0:10:13.20:0,13,98	0/0:13,0:14:22.80:0,23,120	1/1:4,13:18:39.80:306,40,0	0/0:11,0:20:1.79:0,2,157	1/1:3,18:21:44.89:369,45,0	1/1:8,31:39:23.28:728,23,0	1/1:3,12:17:37.95:301,38,0	0/0:11,0:11:20.99:0,21,196	0/1:10,0:10:12.01:12,0,84	0/1:20,2:21:39.62:40,0,115	0/0:8,0:9:7.70:0,8,60	0/0:11,0:11:5.99:0,6,49	0/0:13,0:14:14.19:0,14,97	1/1:6,9:15:20.37:171,20,0	1/1:6,8:14:20.79:163,21,0	0/0:21,1:22:26.44:0,26,462	1/1:4,1:6:5.03:31,5,0
chr10	46813686	.	GTATTTATT	G	298.94	PASS	AC=8;AF=0.174;AN=46;BaseQRankSum=2.872;DP=312;FS=3.418;HRun=0;HaplotypeScore=75.7295;InbreedingCoeff=0.6041;MQ=70.12;MQ0=3;MQRankSum=-2.076;QD=6.10;ReadPosRankSum=-0.118;VQSLOD=1.5952;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:18:21.05:0,21,761	0/0:3,0:5:5.99:0,6,49	./.	./.	0/0:7,0:7:9.03:0,9,339	0/0:16,0:16:21.06:0,21,764	0/0:8,0:8:9.03:0,9,369	0/0:35,0:35:27.04:0,27,706	0/0:8,0:8:12.04:0,12,491	0/0:7,0:8:9.03:0,9,294	./.	0/0:7,0:7:6.02:0,6,246	0/0:9,0:9:9.03:0,9,368	./.	0/0:5,0:10:8.98:0,9,73	0/0:13,0:13:9.03:0,9,369	0/0:35,0:35:36.12:0,36,1239	0/0:15,0:15:27.09:0,27,996	1/1:20,3:22:9.02:174,9,0	1/1:10,1:11:3.01:75,3,0	1/1:5,0:5:3:25,3,0	./.	0/0:5,0:5:3.01:0,3,70	0/0:1,0:3:6.02:0,6,209	0/0:10,0:10:12.04:0,12,491	0/0:9,0:9:12.04:0,12,488	1/1:5,5:10:6.02:146,6,0	0/0:15,0:14:12.04:0,12,491
chr10	46814365	.	C	CT	2110.09	PASS	AB=0.835;AC=28;AF=0.500;AN=56;BaseQRankSum=-5.593;DP=608;FS=8.094;HRun=12;HaplotypeScore=82.9619;InbreedingCoeff=0.6074;MQ=51.64;MQ0=37;MQRankSum=3.046;QD=5.20;ReadPosRankSum=-0.341;VQSLOD=1.7650;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:20:16.27:0,16,47	0/0:5,0:5:14.89:0,15,107	0/0:84,0:14:21.94:0,22,99	0/1:93,0:27:1.20:1,0,82	0/1:18,4:21:24.48:169,0,24	0/0:9,0:13:10.82:0,11,36	0/0:12,0:12:16.88:0,17,55	1/1:12,15:27:35.65:269,36,0	0/0:4,0:7:12.64:0,13,40	1/1:14,9:22:4.65:175,5,0	1/1:10,14:23:26.50:229,27,0	0/0:8,0:9:8.94:0,9,27	0/0:5,0:5:5.60:0,6,19	0/1:11,6:15:18.24:18,0,36	0/0:14,0:13:20.76:0,21,148	1/1:16,7:23:15.45:285,15,0	0/1:21,9:28:5.49:176,0,5	1/1:15,3:15:26.91:225,27,0	1/1:20,0:19:6.71:36,7,0	1/1:16,0:19:16.52:88,17,0	1/1:3,0:7:11.27:62,11,0	0/0:7,0:8:7.70:0,8,22	0/0:9,0:12:16.12:0,16,53	0/0:5,0:5:1.81:0,2,5	1/1:17,0:16:10.67:187,11,0	1/1:25,3:28:26.57:313,27,0	1/1:13,0:15:7.63:60,8,0	1/1:7,2:15:2.84:14,3,0
chr10	46814390	.	CT	C	1568.23	PASS	AB=0.959;AC=28;AF=0.500;AN=56;BaseQRankSum=2.641;DP=489;FS=1.847;HRun=9;HaplotypeScore=69.9557;InbreedingCoeff=0.7078;MQ=45.36;MQ0=48;MQRankSum=-5.015;QD=6.45;ReadPosRankSum=0.969;VQSLOD=1.0343;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,7:16:17.91:155,18,0	0/0:6,0:6:12.02:0,12,128	0/0:51,0:4:5.09:0,5,19	0/1:61,0:17:12.73:13,0,42	0/0:20,2:20:11.44:0,11,300	1/1:3,7:10:8.47:104,8,0	1/1:5,13:14:35.97:320,36,0	0/0:20,0:19:42.06:0,42,453	1/1:5,8:11:0.28:128,0,0	0/0:17,0:17:38.95:0,39,429	0/0:17,0:14:25.22:0,25,236	1/1:6,8:13:8.21:80,8,0	1/1:1,6:7:11.99:102,12,0	0/0:21,0:17:36.07:0,36,386	0/0:8,0:5:6.02:0,6,67	0/0:18,0:18:33.04:0,33,357	0/0:23,1:22:11.61:0,12,351	0/1:13,1:12:4.90:5,0,161	1/1:7,7:12:17.99:162,18,0	1/1:6,8:13:8.98:82,9,0	1/1:6,3:8:2.06:25,2,0	1/1:2,7:8:5.89:55,6,0	1/1:5,13:18:35.92:317,36,0	1/1:3,6:9:14.04:115,14,0	0/0:10,0:8:9.03:0,9,104	0/0:20,0:16:27.52:0,28,291	1/1:4,9:13:11.98:110,12,0	0/0:12,0:11:20.88:0,21,231
chr10	46816841	.	A	AGTTGTTGTTGTT	26741.99	PASS	AC=48;AF=0.923;AN=52;BaseQRankSum=-6.763;DP=797;FS=1.726;HRun=0;HaplotypeScore=268.1100;InbreedingCoeff=0.8500;MQ=64.93;MQ0=7;MQRankSum=-6.455;QD=39.50;ReadPosRankSum=-3.332;VQSLOD=3.8804;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:21,5:26:21.07:1093,21,0	0/0:0,0:5:12.04:0,12,335	./.	./.	1/1:31,0:38:37.94:1096,38,0	1/1:20,0:28:21.07:715,21,0	1/1:26,0:27:12.04:393,12,0	1/1:41,0:41:30.01:664,30,0	1/1:24,7:32:42.14:2318,42,0	1/1:18,0:28:33.11:610,33,0	1/1:17,0:22:15.05:425,15,0	1/1:25,1:34:30.10:1495,30,0	1/1:24,6:31:39.13:2147,39,0	1/1:17,0:34:33.58:1051,34,0	0/0:12,0:36:60.21:0,60,1660	1/1:17,0:27:25.33:790,25,0	1/1:11,0:16:18.06:567,18,0	1/1:6,0:14:12.04:386,12,0	1/1:25,4:30:24.05:999,24,0	1/1:25,3:29:24:952,24,0	1/1:25,0:25:6.02:145,6,0	1/1:16,0:16:13.24:312,13,0	1/1:24,1:26:21.96:839,22,0	1/1:16,3:19:9.03:379,9,0	1/1:17,0:31:39.13:1299,39,0	1/1:36,9:45:72.23:3659,72,0	1/1:25,11:40:54.18:2922,54,0	1/1:9,5:14:27.09:1488,27,0
chr10	46821013	.	C	CTT	463.94	PASS	AB=0.845;AC=14;AF=0.250;AN=56;BaseQRankSum=4.211;DP=443;FS=19.612;HRun=0;HaplotypeScore=86.7698;InbreedingCoeff=0.3689;MQ=65.77;MQ0=5;MQRankSum=-2.137;QD=4.18;ReadPosRankSum=-1.083;VQSLOD=0.8935;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:14,2:18:3.67:153,0,4	0/0:6,0:6:17.95:0,18,244	0/0:28,0:11:19.27:0,19,183	0/0:17,0:9:16.80:0,17,145	0/0:24,0:24:59.51:0,60,802	1/1:4,3:7:0.33:51,0,0	0/1:6,1:9:24.59:25,0,29	0/0:33,0:33:83.96:0,84,1245	1/1:8,2:13:22.53:176,23,0	0/0:24,0:23:63.10:0,63,916	0/0:17,0:17:36.01:0,36,490	0/1:15,0:15:10.61:42,0,11	1/1:13,1:14:4.70:79,5,0	0/0:15,0:15:35.97:0,36,541	0/0:21,0:20:51.13:0,51,692	0/0:16,0:16:29.80:0,30,438	0/0:27,0:25:60.15:0,60,807	0/0:21,0:21:51.13:0,51,732	0/0:21,0:20:27.67:0,28,551	0/0:14,0:14:28.18:0,28,331	0/1:5,0:5:3.16:3,0,85	0/1:10,1:11:14.85:25,0,15	0/1:6,7:13:8.09:38,0,8	1/1:4,0:3:1.92:27,2,0	0/0:17,0:17:42.14:0,42,659	0/0:16,0:15:39.10:0,39,575	0/0:10,0:10:24.04:0,24,289	0/0:5,0:5:12.04:0,12,184
chr10	46822753	.	A	AG	1548.41	PASS	AB=0.781;AC=18;AF=0.321;AN=56;BaseQRankSum=1.412;DP=421;FS=3.272;HRun=1;HaplotypeScore=67.3771;InbreedingCoeff=0.8059;MQ=62.01;MQ0=15;MQRankSum=-0.342;QD=10.39;ReadPosRankSum=0.938;VQSLOD=1.6756;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,7:19:30.10:344,30,0	0/0:4,0:4:6.28:0,6,88	0/0:42,0:12:23.53:0,24,225	0/1:42,0:16:8.92:9,0,48	0/0:17,0:16:27.64:0,28,325	1/1:3,10:13:4.04:122,4,0	1/1:11,5:14:25.61:285,26,0	0/0:27,0:27:60.43:0,60,634	1/1:7,2:9:17.52:193,18,0	0/0:11,0:11:20.56:0,21,172	0/0:12,0:13:16.06:0,16,235	0/1:2,7:9:0.54:75,0,1	1/1:6,2:8:9.02:115,9,0	0/0:17,0:17:21.02:0,21,209	0/0:18,0:18:30.89:0,31,283	0/0:13,0:13:24.52:0,25,256	0/0:17,0:16:20.64:0,21,213	0/0:13,0:13:23.99:0,24,250	0/0:15,0:14:31.99:0,32,322	0/0:18,0:17:28.48:0,28,296	0/0:8,0:8:17.68:0,18,131	1/1:0,10:10:25.70:169,26,0	1/1:19,0:19:32.51:344,33,0	1/1:1,3:3:6.02:88,6,0	0/0:13,0:13:23.10:0,23,226	0/0:8,0:8:17.83:0,18,144	0/0:9,0:8:15.02:0,15,157	0/0:8,0:8:17.94:0,18,161
chr10	46822780	.	GA	G	374.83	PASS	AB=0.879;AC=8;AF=0.143;AN=56;BaseQRankSum=0.687;DP=406;FS=0.636;HRun=13;HaplotypeScore=59.7258;InbreedingCoeff=0.2577;MQ=64.58;MQ0=14;MQRankSum=1.404;QD=3.32;ReadPosRankSum=-0.067;VQSLOD=-0.4378;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:22:46.06:0,46,406	1/1:1,2:3:2.89:22,3,0	0/0:25,0:8:8.84:0,9,65	0/0:34,0:13:13.56:0,14,127	0/0:20,0:19:28.60:0,29,267	0/0:12,0:12:23.87:0,24,202	0/0:11,0:10:20.98:0,21,191	0/1:33,3:35:4.53:5,0,373	0/0:11,0:12:17.17:0,17,186	0/0:12,0:12:23.03:0,23,237	0/0:13,0:14:29.87:0,30,268	0/0:12,0:11:25.73:0,26,210	0/0:9,0:9:20.94:0,21,181	0/0:11,0:10:21.03:0,21,204	1/1:3,12:14:32.80:241,33,0	0/1:13,3:16:29.66:30,0,222	0/0:29,2:31:3.47:0,3,540	0/0:7,0:7:5.98:0,6,50	0/1:18,6:22:66.79:126,0,67	0/1:18,0:18:44.37:83,0,44	0/0:7,0:7:0:0,0,0	0/0:2,0:2:6.01:0,6,58	0/0:6,0:7:11.45:0,11,82	0/0:3,0:2:5.99:0,6,52	0/0:9,0:11:23.71:0,24,204	0/0:13,0:12:12.08:0,12,153	0/0:8,0:8:0.95:0,1,23	0/0:5,0:5:15.02:0,15,146
chr10	46822781	.	A	AAAAG	1476.46	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=1.799;DP=406;FS=0.000;HRun=0;HaplotypeScore=81.3976;InbreedingCoeff=0.1938;MQ=67.09;MQ0=13;MQRankSum=-0.601;QD=10.18;ReadPosRankSum=1.058;VQSLOD=2.6310;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:22:99:132,0,180	0/0:3,0:3:4.51:0,5,24	0/0:26,0:10:2.47:0,2,59	0/0:33,0:13:9.52:0,10,79	0/0:19,0:18:42.72:0,43,494	0/1:12,0:12:45.63:90,0,46	0/1:11,0:10:41.54:42,0,131	0/0:36,0:35:42.44:0,42,622	0/1:12,0:12:88.11:128,0,88	0/0:13,0:12:34.78:0,35,400	0/0:14,0:14:36:0,36,446	0/0:12,0:11:8.60:0,9,96	0/1:9,0:9:12.63:13,0,119	0/0:12,0:11:26.91:0,27,354	0/1:15,0:14:9.76:10,0,86	0/0:16,0:16:15.13:0,15,434	0/0:32,0:31:54.82:0,55,901	0/0:7,0:7:16.77:0,17,157	1/1:21,3:22:0.96:514,1,0	1/1:10,9:19:14.91:410,15,0	0/0:3,4:7:2.55:0,3,15	0/0:2,0:2:4.82:0,5,34	1/1:7,0:7:12.89:84,13,0	0/1:3,0:2:4.21:4,0,7	0/0:11,0:11:27.04:0,27,408	0/0:13,0:11:32.67:0,33,321	1/1:5,3:8:0.96:207,1,0	0/0:5,0:5:15.05:0,15,245
chr10	46823007	.	CA	C	4394.34	PASS	AB=0.633;AC=48;AF=0.857;AN=56;BaseQRankSum=-4.030;DP=457;FS=0.884;HRun=14;HaplotypeScore=52.7715;InbreedingCoeff=0.2863;MQ=53.50;MQ0=20;MQRankSum=1.811;QD=10.17;ReadPosRankSum=2.262;VQSLOD=4.2360;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:14,18:36:9.65:330,10,0	1/1:1,5:6:11.89:82,12,0	0/0:14,0:3:8.16:0,8,45	0/0:11,0:2:5.95:0,6,44	1/1:6,16:21:41.47:279,41,0	1/1:2,15:19:42.75:279,43,0	1/1:2,6:11:18.94:114,19,0	1/1:5,18:23:52.52:354,53,0	1/1:6,5:12:22.39:138,22,0	1/1:9,12:21:40.57:269,41,0	1/1:5,9:15:24.89:165,25,0	1/1:7,6:14:7.76:129,8,0	1/1:1,9:11:20.82:143,21,0	1/1:4,8:11:20.80:144,21,0	1/1:3,11:15:22.71:150,23,0	0/1:6,11:18:43.10:149,0,43	1/1:10,15:24:4.74:249,5,0	1/1:6,11:16:29.69:200,30,0	1/1:11,9:17:5.92:161,6,0	0/1:9,10:19:9.94:117,0,10	0/1:5,5:7:18.90:32,0,19	1/1:4,3:9:12.95:73,13,0	1/1:7,5:11:14.76:103,15,0	1/1:4,8:11:20.82:144,21,0	1/1:4,12:17:34.74:232,35,0	1/1:8,10:16:29.64:205,30,0	0/1:5,8:13:13.43:67,0,13	1/1:10,5:13:13.36:86,13,0
chr10	46825434	.	GACAGACAGAC	G	3691.05	PASS	AB=0.753;AC=18;AF=0.321;AN=56;BaseQRankSum=-0.335;DP=527;FS=4.244;HRun=0;HaplotypeScore=154.9028;InbreedingCoeff=0.6191;MQ=60.05;MQ0=11;MQRankSum=-1.359;QD=21.09;ReadPosRankSum=-1.004;VQSLOD=2.7914;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:60.28:0,60,763	0/0:7,0:7:18.02:0,18,315	0/0:34,0:14:21.52:0,22,482	0/0:35,0:15:13.54:0,14,333	0/0:2,15:17:0.47:0,0,1	0/0:13,0:13:30.44:0,30,358	0/0:28,0:28:8.99:0,9,124	1/1:1,15:15:44.70:678,45,0	0/0:20,0:20:11.95:0,12,94	1/1:1,12:13:27.03:511,27,0	0/1:0,6:6:0:0,0,0	0/0:19,0:19:21.03:0,21,380	0/0:21,0:20:36.98:0,37,542	0/0:0,11:14:0.47:0,0,1	0/0:18,0:18:33.52:0,34,603	0/1:1,13:20:78.30:113,0,78	1/1:33,1:38:46.31:1248,46,0	1/1:0,10:10:3.01:39,3,0	0/1:27,0:27:76.84:77,0,546	0/0:18,0:18:11.94:0,12,121	0/0:24,0:24:9.99:0,10,119	0/0:13,0:13:23.99:0,24,358	0/0:15,0:14:32.93:0,33,374	0/0:23,0:22:15:0,15,257	1/1:13,0:14:17.33:329,17,0	1/1:1,9:11:27.08:536,27,0	0/1:15,0:15:20.02:20,0,200	1/1:5,0:5:9.01:141,9,0
chr10	46825438	.	GACAGAC	G	2327.23	PASS	AB=0.974;AC=22;AF=0.393;AN=56;BaseQRankSum=1.907;DP=517;FS=4.730;HRun=0;HaplotypeScore=135.7771;InbreedingCoeff=0.2600;MQ=57.88;MQ0=11;MQRankSum=-0.803;QD=8.65;ReadPosRankSum=-0.850;VQSLOD=2.2527;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:34,0:34:26.93:27,0,118	0/0:5,0:5:12.04:0,12,180	0/0:30,0:10:13.06:0,13,256	0/0:35,0:15:16.52:0,17,230	0/0:16,1:16:0.47:0,0,1	0/0:13,0:13:1.03:0,1,78	0/0:28,0:28:1.64:0,2,61	1/1:16,0:15:37.29:401,37,0	0/0:19,0:19:0.47:0,0,1	1/1:12,0:13:28.25:313,28,0	0/1:6,0:6:0:0,0,0	0/0:21,0:21:13.82:0,14,155	0/1:22,0:21:35.08:35,0,154	0/0:11,3:14:0.47:0,0,1	0/0:15,0:15:27.52:0,28,367	0/1:16,4:19:46.61:81,0,47	1/1:34,3:38:38.76:806,39,0	1/1:10,0:10:2.74:12,3,0	0/1:27,0:27:71.97:72,0,123	0/0:17,0:17:5.89:0,6,39	0/1:24,0:25:16.42:40,0,16	0/0:12,0:12:7.93:0,8,88	0/1:17,0:16:12.01:12,0,102	0/0:22,0:21:9.01:0,9,86	1/1:13,0:13:14.39:223,14,0	1/1:9,1:10:26.99:383,27,0	0/1:14,0:14:23.75:24,0,58	1/1:4,0:4:6:69,6,0
chr10	46825440	.	C	CAG	1502.14	PASS	AB=0.994;AC=33;AF=0.635;AN=52;BaseQRankSum=1.237;DP=523;FS=1.675;HRun=0;HaplotypeScore=124.1216;InbreedingCoeff=0.3242;MQ=57.50;MQ0=12;MQRankSum=-0.069;QD=4.09;ReadPosRankSum=2.247;VQSLOD=2.7732;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:35,0:35:12.39:79,12,0	0/0:6,0:6:12.04:0,12,159	0/0:30,0:10:8.98:0,9,168	0/0:36,0:15:24.27:0,24,203	./.	0/1:13,0:13:12.89:13,0,24	0/0:28,0:28:2.37:0,2,9	0/1:16,0:15:0.34:0,0,42	1/1:19,0:19:0.45:0,0,0	0/1:13,0:13:8.31:57,0,8	0/1:6,0:6:0:0,0,0	1/1:21,0:21:9.46:94,9,0	1/1:21,0:20:13.46:100,13,0	./.	0/0:15,0:15:8.62:0,9,221	0/1:20,0:19:14.77:43,0,15	1/1:38,0:38:3.07:63,3,0	0/0:10,0:10:2.60:0,3,10	1/1:8,22:29:65.09:723,65,0	1/1:4,13:18:3.01:34,3,0	0/1:23,1:24:11.62:144,0,12	1/1:13,0:13:2.82:27,3,0	1/1:17,0:16:1.29:3,1,0	1/1:22,0:21:8.98:79,9,0	1/1:13,0:13:0.57:21,1,0	1/1:10,0:10:6.90:63,7,0	1/1:3,11:14:11.39:109,11,0	0/1:4,0:4:0:0,0,0
chr10	46825442	.	GAC	G	3128.80	PASS	AB=1.000;AC=37;AF=0.661;AN=56;BaseQRankSum=0.236;DP=523;FS=15.186;HRun=0;HaplotypeScore=115.1665;InbreedingCoeff=0.5004;MQ=56.21;MQ0=12;MQRankSum=1.338;QD=7.88;ReadPosRankSum=2.855;VQSLOD=2.4518;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:36,0:36:59.76:485,60,0	0/0:6,0:6:11.87:0,12,105	0/0:29,0:9:13.97:0,14,123	0/0:36,0:15:11.77:0,12,126	0/0:17,0:16:0:0,0,0	1/1:11,3:14:29.74:286,30,0	1/1:2,28:30:2.86:40,3,0	1/1:16,0:15:13.28:163,13,0	1/1:19,0:19:11.93:92,12,0	1/1:13,0:13:17.56:161,18,0	0/1:6,0:6:0:0,0,0	1/1:20,0:20:1.22:63,1,0	1/1:19,0:18:33.61:251,34,0	0/0:14,0:14:0:0,0,0	0/0:14,0:14:20.70:0,21,156	0/1:20,0:19:3.93:79,0,4	1/1:39,0:39:37.05:406,37,0	0/0:10,0:10:0.89:0,1,2	1/1:31,0:30:47.64:408,48,0	1/1:15,0:15:2.92:17,3,0	0/1:25,0:25:1.98:81,0,2	1/1:12,0:12:20.95:170,21,0	1/1:16,0:15:18.45:150,18,0	1/1:22,0:21:5.98:47,6,0	1/1:13,0:13:5.56:91,6,0	1/1:10,0:10:26.45:217,26,0	0/1:15,0:15:1.69:41,0,2	0/1:6,0:6:2.92:32,0,3
chr10	46825444	.	C	CAGAGAGAG	2223.20	PASS	AB=0.926;AC=41;AF=0.820;AN=50;BaseQRankSum=-2.048;DP=525;FS=1.871;HRun=0;HaplotypeScore=152.7738;InbreedingCoeff=0.3266;MQ=55.06;MQ0=12;MQRankSum=0.041;QD=5.53;ReadPosRankSum=0.188;VQSLOD=2.7701;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:37,0:37:29.73:311,30,0	1/1:6,0:6:3:25,3,0	./.	./.	./.	0/1:14,0:14:42.26:42,0,43	0/0:30,0:30:2.48:0,2,9	1/1:17,0:16:10.66:66,11,0	0/1:20,0:20:0:0,0,0	1/1:14,0:14:9.89:157,10,0	0/1:7,0:7:0:0,0,0	1/1:21,0:21:7.82:78,8,0	1/1:18,0:17:17.83:235,18,0	0/0:14,0:14:0:0,0,0	0/1:7,7:17:0:0,0,0	1/1:21,0:20:11.19:74,11,0	1/1:37,0:37:18.79:232,19,0	1/1:11,0:11:5.75:47,6,0	1/1:29,0:28:34.82:393,35,0	0/1:14,0:14:0:0,0,0	1/1:26,0:26:9.24:138,9,0	1/1:12,0:12:6:74,6,0	1/1:14,0:13:6.01:74,6,0	1/1:23,0:22:5.94:42,6,0	1/1:14,0:14:5.97:46,6,0	1/1:10,0:10:11.94:129,12,0	1/1:15,0:15:13.48:131,13,0	1/1:5,0:5:4.51:23,5,0
chr10	46825452	.	G	GAGAC	1208.85	PASS	AB=1.000;AC=18;AF=0.321;AN=56;BaseQRankSum=0.355;DP=518;FS=0.000;HRun=0;HaplotypeScore=128.7169;InbreedingCoeff=0.3063;MQ=51.57;MQ0=12;MQRankSum=3.942;QD=4.58;ReadPosRankSum=5.197;VQSLOD=2.0509;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:37,0:37:48.33:479,48,0	0/0:5,0:5:3.49:0,3,40	0/0:28,0:8:6.45:0,6,48	0/0:38,0:13:8.83:0,9,80	0/1:16,0:16:0:0,0,0	1/1:14,0:14:19.81:151,20,0	0/1:33,0:33:14.82:15,0,33	0/0:18,0:17:43.73:0,44,280	0/0:1,15:18:0:0,0,0	0/0:14,0:14:23.43:0,23,152	0/0:7,0:7:3:0,3,25	1/1:5,12:21:7.83:130,8,0	0/1:18,0:16:0.90:165,0,1	0/1:12,0:12:0.02:0,0,0	0/0:14,0:14:4.75:0,5,67	0/1:21,0:20:35.76:36,0,53	0/0:37,0:37:52.13:0,52,351	0/0:10,0:10:2.94:0,3,21	0/1:30,0:29:56.03:56,0,120	0/0:14,0:14:4.52:0,5,24	0/0:25,0:25:2.60:0,3,44	1/1:11,0:11:17.92:185,18,0	1/1:12,0:11:7.18:52,7,0	0/1:24,0:23:8.52:88,0,9	0/0:12,0:12:8.96:0,9,79	0/0:11,0:11:21.28:0,21,141	0/1:15,0:15:13.29:13,0,48	0/0:2,0:2:4.72:0,5,21
chr10	46825454	.	G	GAC	890.04	PASS	AB=0.948;AC=16;AF=0.286;AN=56;BaseQRankSum=0.552;DP=528;FS=4.934;HRun=0;HaplotypeScore=122.5400;InbreedingCoeff=0.2570;MQ=51.20;MQ0=13;MQRankSum=3.141;QD=3.52;ReadPosRankSum=4.788;VQSLOD=2.1814;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:36,0:36:33.29:366,33,0	0/0:5,0:5:8.93:0,9,65	0/0:29,0:8:6.45:0,6,48	0/0:43,0:15:11.10:0,11,116	0/1:16,0:16:0.04:0,0,0	1/1:14,0:14:18.28:140,18,0	0/1:35,0:35:12.21:12,0,43	0/0:18,0:17:46.60:0,47,300	0/0:18,0:18:2.96:0,3,23	0/0:14,0:14:15.56:0,16,195	0/0:8,0:8:3:0,3,25	1/1:19,1:20:9.02:107,9,0	0/1:18,0:16:6.22:114,0,6	0/0:11,0:11:2.73:0,3,24	0/1:15,0:15:0.44:0,0,61	0/1:21,0:20:20.79:21,0,104	0/0:38,0:38:56.47:0,56,419	0/0:8,0:8:5.99:0,6,57	0/1:30,0:29:31.67:32,0,202	0/0:14,0:14:7.52:0,8,49	0/0:26,0:26:10.69:0,11,113	1/1:11,0:11:17.90:142,18,0	0/1:10,0:9:15.77:40,0,16	0/1:8,18:26:51.67:79,0,52	0/0:12,0:12:8.86:0,9,80	0/0:13,0:13:15.91:0,16,179	0/0:14,0:14:6.27:0,6,87	0/0:3,0:3:7.61:0,8,43
chr10	46827138	.	AT	A	6605.95	PASS	AB=0.693;AC=44;AF=0.786;AN=56;BaseQRankSum=-2.095;DP=637;FS=0.000;HRun=14;HaplotypeScore=71.9144;InbreedingCoeff=0.5474;MQ=76.09;MQ0=0;MQRankSum=-1.795;QD=12.21;ReadPosRankSum=3.796;VQSLOD=4.8993;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,2:35:60.26:0,60,660	0/0:4,0:9:14.20:0,14,72	0/1:18,1:11:13.45:13,0,39	0/0:18,0:14:3.77:0,4,48	1/1:7,20:28:47.70:332,48,0	1/1:5,19:24:47.54:329,48,0	1/1:3,13:17:40.68:273,41,0	1/1:8,17:26:12.69:224,13,0	1/1:9,16:25:44.55:308,45,0	0/1:7,15:22:11.16:205,0,11	1/1:6,15:21:43.50:288,43,0	1/1:5,12:17:14.95:223,15,0	0/1:10,11:22:15.04:190,0,15	1/1:6,9:15:17.79:123,18,0	0/0:11,0:34:55.98:0,56,307	1/1:5,24:29:65.27:452,65,0	1/1:11,23:34:46.92:467,47,0	0/1:3,8:11:7:102,0,7	1/1:6,15:24:53.61:344,54,0	1/1:7,27:35:68.58:475,69,0	1/1:5,8:13:17.79:123,18,0	1/1:7,12:19:23.57:164,24,0	1/1:4,17:21:50.51:348,51,0	1/1:5,18:23:56.45:390,56,0	1/1:8,18:26:19.70:280,20,0	1/1:7,22:30:23.59:421,24,0	1/1:5,19:25:51.58:340,52,0	1/1:2,11:14:28.80:191,29,0
chr10	46827989	.	TTTGTTG	T	6141	PASS	AB=0.848;AC=22;AF=0.393;AN=56;BaseQRankSum=0.140;DP=620;FS=2.031;HRun=0;HaplotypeScore=154.7713;InbreedingCoeff=0.8600;MQ=71.56;MQ0=5;MQRankSum=-5.447;QD=22.58;ReadPosRankSum=-4.600;VQSLOD=3.9179;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:27:46.50:0,47,284	0/0:16,0:16:30.07:0,30,894	0/0:33,0:25:12.02:0,12,286	0/0:31,0:22:15.05:0,15,297	1/1:13,14:28:38.61:379,39,0	0/0:5,0:22:44.13:0,44,277	0/1:9,0:16:0.09:0,0,95	1/1:23,22:44:62.99:735,63,0	0/0:10,0:25:35.35:0,35,226	1/1:12,15:26:39.10:689,39,0	1/1:9,16:25:38.83:505,39,0	0/0:5,0:18:32.36:0,32,203	0/0:6,0:19:29.42:0,29,184	1/1:5,13:18:24.08:496,24,0	0/0:28,0:28:66.23:0,66,1941	1/1:4,16:20:33.11:682,33,0	0/1:11,0:11:21.91:171,0,22	1/1:10,3:13:17.84:281,18,0	0/0:17,0:17:21.07:0,21,591	0/0:18,0:18:30.10:0,30,944	0/0:37,0:37:72.23:0,72,2126	0/0:3,0:9:17.65:0,18,110	0/0:3,0:11:9.15:0,9,79	0/0:5,0:19:35.30:0,35,221	1/1:7,17:24:36.12:738,36,0	1/1:9,24:33:72.19:1279,72,0	0/0:16,0:16:36.12:0,36,1118	1/1:6,6:12:9.03:186,9,0
chr10	46829657	.	TTA	T	7473.62	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=8.816;DP=670;FS=0.000;HRun=0;HaplotypeScore=134.1218;InbreedingCoeff=0.9999;MQ=60.27;MQ0=5;MQRankSum=-0.562;QD=39.13;ReadPosRankSum=5.006;VQSLOD=6.4621;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,30:30:84.28:1276,84,0	0/0:16,0:16:48.14:0,48,862	0/0:21,0:12:36.10:0,36,594	0/0:29,0:20:55.20:0,55,869	0/0:23,0:23:69.18:0,69,1176	1/1:0,25:24:60.20:919,60,0	1/1:1,23:24:60.20:918,60,0	0/0:29,0:29:81.28:0,81,1509	1/1:1,25:26:69.23:1056,69,0	0/0:30,0:30:87.28:0,87,1519	0/0:16,0:16:48.16:0,48,895	1/1:0,23:23:54.18:827,54,0	1/1:0,16:16:36.12:551,36,0	0/0:30,0:30:90.29:0,90,1633	0/0:31,0:31:93.27:0,93,1638	0/0:23,0:23:66.23:0,66,1207	0/0:31,0:31:90.31:0,90,1662	0/0:25,0:25:69.16:0,69,1191	0/0:24,0:22:66.22:0,66,1179	0/0:33,0:32:96.26:0,96,1601	0/0:29,0:29:87.24:0,87,1511	1/1:0,14:14:39.13:597,39,0	1/1:0,19:19:54.18:825,54,0	1/1:0,14:14:32.80:505,33,0	0/0:19,0:19:57.18:0,57,1032	0/0:21,0:20:63.21:0,63,1141	0/0:31,0:31:93.32:0,93,1709	0/0:18,0:17:51.17:0,51,937
chr10	46830402	.	T	TG	62.12	PASS	AB=0.919;AC=4;AF=0.071;AN=56;BaseQRankSum=12.187;DP=569;FS=0.000;HRun=0;HaplotypeScore=92.0210;InbreedingCoeff=-0.0857;MQ=65.53;MQ0=10;MQRankSum=-0.364;QD=0.94;ReadPosRankSum=-0.572;VQSLOD=1.7532;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:12.48:0,12,608	0/0:10,0:10:30.10:0,30,418	0/0:26,0:22:58.78:0,59,749	0/0:16,0:10:30.10:0,30,413	0/0:17,0:16:13.15:0,13,453	0/0:16,0:16:42:0,42,457	0/0:23,1:24:60.81:0,61,691	0/0:28,0:28:1.44:0,1,927	0/0:21,0:21:14.91:0,15,251	0/0:15,0:15:35.98:0,36,524	0/0:18,0:18:47.44:0,47,574	0/0:29,0:29:17.97:0,18,293	0/0:14,0:14:15.01:0,15,239	0/0:11,0:11:4.58:0,5,155	0/0:34,0:34:96.27:0,96,1274	0/0:20,0:20:32.85:0,33,517	0/0:26,0:25:50.58:0,51,703	0/0:10,0:9:22.78:0,23,331	0/1:28,2:28:1.94:2,0,832	0/0:26,0:25:56.86:0,57,785	0/1:9,5:14:96.20:96,0,301	0/1:16,0:16:11.02:11,0,303	0/0:20,0:19:29.13:0,29,401	0/0:25,0:25:16.38:0,16,357	0/0:16,0:16:35.23:0,35,574	0/0:22,0:22:42.47:0,42,581	0/0:24,0:24:52.38:0,52,730	0/1:6,0:6:45.22:51,0,45
chr10	46833460	.	G	GT	3134.69	PASS	AB=0.995;AC=20;AF=0.357;AN=56;BaseQRankSum=-2.905;DP=697;FS=1.793;HRun=9;HaplotypeScore=79.5386;InbreedingCoeff=0.8475;MQ=65.96;MQ0=21;MQRankSum=-2.109;QD=13.40;ReadPosRankSum=2.374;VQSLOD=3.8288;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,23:30:74.49:829,74,0	0/0:7,0:7:21:0,21,182	0/0:88,0:24:29.99:0,30,226	0/1:93,0:21:22.53:23,0,50	0/0:31,0:31:89.97:0,90,781	1/1:2,5:7:12.03:133,12,0	1/1:2,7:9:21.06:232,21,0	0/0:38,0:38:65.05:0,65,684	1/1:1,15:16:48.13:529,48,0	0/0:26,0:26:56.97:0,57,494	0/0:19,0:19:47.97:0,48,412	1/1:1,9:10:30.08:330,30,0	1/1:3,9:12:6.72:282,7,0	0/0:12,0:12:26.97:0,27,230	0/0:32,0:32:59.17:0,59,701	0/1:12,0:12:3.21:3,0,204	0/0:40,0:40:99:0,111,962	0/0:20,0:20:56.98:0,57,495	0/0:20,0:20:37.22:0,37,392	0/0:23,0:23:59.94:0,60,513	0/0:11,0:11:29.99:0,30,260	1/1:3,5:8:21.04:223,21,0	1/1:8,10:18:38.99:429,39,0	1/1:1,12:13:30.08:332,30,0	0/0:23,0:23:68.94:0,69,589	0/0:25,0:25:68.97:0,69,593	0/0:25,0:25:62.96:0,63,546	0/0:23,0:23:65.67:0,66,556
chr10	46833520	.	GTTTTT	G	4244.25	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=1.533;DP=629;FS=0.904;HRun=7;HaplotypeScore=144.5762;InbreedingCoeff=0.9956;MQ=61.46;MQ0=7;MQRankSum=-2.349;QD=35.67;ReadPosRankSum=3.719;VQSLOD=1.4690;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,18:29:31.35:706,31,0	0/0:6,0:6:18.05:0,18,434	0/0:31,0:14:32.41:0,32,581	0/0:42,0:20:16.37:0,16,447	0/0:29,0:29:84.17:0,84,1706	0/0:16,0:16:42.13:0,42,1086	0/0:10,0:10:29.90:0,30,639	0/0:30,0:30:75.23:0,75,1508	1/1:1,9:10:24.04:447,24,0	0/0:31,0:31:93.30:0,93,2048	0/0:17,0:17:51.15:0,51,1076	1/1:1,15:16:36.11:705,36,0	1/1:1,13:14:32.57:626,33,0	0/0:19,0:18:54.13:0,54,1135	0/0:26,0:26:75.23:0,75,2008	0/0:22,0:22:66.22:0,66,1502	0/0:47,0:47:99:0,138,2757	0/0:23,0:23:66.17:0,66,1377	0/0:23,0:21:63.03:0,63,1155	0/0:31,0:31:90.29:0,90,2511	0/0:16,0:16:45.13:0,45,1128	1/1:3,15:17:44.95:745,45,0	1/1:2,15:18:35.56:543,36,0	1/1:9,5:13:29.61:472,30,0	0/0:23,0:23:63.15:0,63,1276	0/0:24,0:24:63.18:0,63,1193	0/0:22,0:22:66.13:0,66,1417	0/0:19,0:19:57.14:0,57,1154
chr10	46834950	.	A	AGAT	14994.71	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-17.812;DP=762;FS=4.841;HRun=0;HaplotypeScore=94.0395;InbreedingCoeff=0.9955;MQ=83.53;MQ0=0;MQRankSum=-4.576;QD=52.61;ReadPosRankSum=-0.830;VQSLOD=6.7893;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,108,1740	0/0:14,0:14:42.14:0,42,673	0/0:19,0:19:54.16:0,54,840	0/0:27,0:27:57.19:0,57,930	1/1:3,27:31:75.26:1673,75,0	0/0:37,0:37:99:0,108,1709	0/0:16,0:16:42.14:0,42,686	1/1:8,34:44:99:2199,108,0	0/0:38,0:38:99:0,111,1768	1/1:4,31:35:93.32:2007,93,0	1/1:3,21:24:45.15:1004,45,0	0/0:14,0:14:36.12:0,36,584	0/0:30,0:30:87.30:0,87,1421	1/1:1,20:22:57.20:1268,57,0	0/0:34,0:34:99:0,102,1642	1/1:1,28:29:69.24:1541,69,0	1/1:1,14:16:39.13:871,39,0	1/1:5,17:22:45.15:1005,45,0	0/0:22,0:22:57.19:0,57,919	0/0:33,0:33:96.33:0,96,1567	0/0:29,0:29:81.26:0,81,1274	0/0:28,0:28:81.28:0,81,1317	0/0:31,0:31:84.29:0,84,1363	0/0:20,0:20:51.17:0,51,816	1/1:1,22:23:60.21:1339,60,0	1/1:1,29:31:87.27:1820,87,0	0/0:47,0:47:99:0,135,2152	1/1:4,4:8:12.04:268,12,0
chr10	46835431	.	CGTGTGTGTGTGTGTGTGTGTGTGTGTGT	C	364.42	PASS	AB=0.930;AC=5;AF=0.096;AN=52;BaseQRankSum=2.795;DP=782;FS=10.226;HRun=0;HaplotypeScore=394.9980;InbreedingCoeff=0.1981;MQ=50.32;MQ0=26;MQRankSum=-3.137;QD=3.34;ReadPosRankSum=-3.602;VQSLOD=0.5033;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:43:39.13:0,39,2276	0/0:11,0:11:12.51:0,13,815	./.	./.	0/0:13,0:13:9.03:0,9,660	0/0:26,0:23:34.47:0,34,2024	0/0:43,0:37:24.55:0,25,1444	1/1:17,0:16:3.01:45,3,0	0/0:31,0:30:51.15:0,51,3412	0/0:35,0:31:20.35:0,20,1880	0/0:28,0:28:11.55:0,12,884	0/0:26,0:26:33.58:0,34,2510	0/0:18,0:14:10.28:0,10,630	0/1:21,1:19:99:202,0,583	0/0:26,0:23:18.06:0,18,1016	0/1:24,6:24:99:196,0,1058	0/1:40,0:33:30.59:31,0,2648	0/0:14,0:14:23.07:0,23,1790	0/0:23,0:20:31.13:0,31,2026	0/0:23,0:22:33.11:0,33,3322	0/0:90,0:84:94.70:0,95,7569	0/0:30,0:27:19.95:0,20,1452	0/0:12,0:12:9.84:0,10,878	0/0:46,0:42:44.18:0,44,3538	0/0:24,0:23:3.59:0,4,342	0/0:25,0:19:12.29:0,12,305	0/0:19,0:18:26.45:0,26,1577	0/0:9,0:7:0.43:0,0,1
chr10	46835658	.	C	CGTGTGT	2128.07	PASS	AC=32;AF=0.842;AN=38;BaseQRankSum=1.320;DP=385;FS=21.382;HRun=0;HaplotypeScore=74.7882;InbreedingCoeff=0.4188;MQ=49.10;MQ0=12;MQRankSum=-3.146;QD=9.54;ReadPosRankSum=-2.663;VQSLOD=-0.2621;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:8,0:7:3.01:0,3,52	./.	0/0:21,0:4:6.02:0,6,121	./.	1/1:16,0:12:3.01:69,3,0	./.	1/1:23,0:20:9.03:226,9,0	./.	1/1:17,0:15:6.02:120,6,0	./.	1/1:14,0:7:3.01:91,3,0	1/1:8,0:7:6.02:117,6,0	./.	0/0:37,0:37:57.29:0,57,1112	1/1:20,0:15:0.98:92,1,0	1/1:17,4:20:12.04:198,12,0	1/1:11,0:12:12.04:277,12,0	1/1:11,0:9:6.49:97,6,0	./.	1/1:16,0:14:5.98:81,6,0	./.	1/1:8,0:7:3:25,3,0	1/1:13,0:11:2.77:71,3,0	1/1:9,0:9:5.99:96,6,0	1/1:17,1:15:15.05:383,15,0	1/1:10,0:8:12.04:266,12,0	1/1:1,0:1:3.01:36,3,0
chr10	46836144	.	AT	A	8746.72	PASS	AB=0.960;AC=49;AF=0.875;AN=56;BaseQRankSum=2.535;DP=497;FS=22.880;HRun=10;HaplotypeScore=53.9390;InbreedingCoeff=0.8352;MQ=82.30;MQ0=0;MQRankSum=-5.622;QD=19.74;ReadPosRankSum=3.303;VQSLOD=3.7421;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,21:24:53.97:469,54,0	0/0:5,0:5:15.04:0,15,166	0/1:23,1:22:2.36:2,0,271	0/0:19,1:19:4.88:0,5,231	1/1:2,14:16:32.80:285,33,0	1/1:2,13:15:32.98:287,33,0	1/1:2,16:18:44.99:390,45,0	1/1:4,21:25:62.98:545,63,0	1/1:1,11:12:29.98:260,30,0	1/1:2,12:15:38.03:318,38,0	1/1:0,12:12:35.99:311,36,0	1/1:1,16:17:44.99:391,45,0	1/1:2,17:19:47.99:417,48,0	1/1:0,10:10:29.99:260,30,0	0/0:28,0:28:49.45:0,49,745	1/1:2,19:21:56.98:495,57,0	1/1:2,21:23:50.99:443,51,0	1/1:2,11:13:26.99:234,27,0	1/1:4,14:18:41.97:365,42,0	1/1:4,15:19:11.79:331,12,0	1/1:0,18:18:41.99:365,42,0	1/1:0,6:6:11.98:104,12,0	1/1:2,12:14:35.98:313,36,0	1/1:3,21:24:53.98:469,54,0	1/1:4,19:23:47.99:417,48,0	1/1:0,17:17:47.98:417,48,0	1/1:3,23:26:62.98:547,63,0	1/1:2,12:14:35.99:313,36,0
chr10	46836471	.	GT	G	4310.52	PASS	AB=0.711;AC=50;AF=0.893;AN=56;BaseQRankSum=-1.650;DP=463;FS=5.942;HRun=12;HaplotypeScore=70.9865;InbreedingCoeff=0.2162;MQ=67.33;MQ0=9;MQRankSum=-0.431;QD=9.64;ReadPosRankSum=4.153;VQSLOD=4.1432;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,0:26:37.30:111,37,0	1/1:0,7:7:20.92:162,21,0	0/0:15,0:10:10.56:0,11,122	0/1:23,0:12:14.15:14,0,39	1/1:4,22:26:17.83:396,18,0	1/1:2,0:14:24.44:71,24,0	1/1:2,0:7:6.10:18,6,0	0/1:12,15:28:8.10:301,0,8	1/1:2,0:12:14.04:41,14,0	1/1:4,13:17:39.22:305,39,0	1/1:7,19:26:50.73:395,51,0	1/1:2,0:10:19.29:70,19,0	1/1:3,0:12:20.37:59,20,0	1/1:2,6:8:5.90:104,6,0	0/1:4,9:13:0.56:179,0,1	1/1:3,7:10:23.83:180,24,0	1/1:6,23:30:54.16:520,54,0	1/1:3,20:23:51.25:396,51,0	1/1:7,1:22:34.40:99,34,0	1/1:4,0:18:32.37:94,32,0	1/1:2,0:6:6.10:18,6,0	1/1:0,0:5:6.11:18,6,0	1/1:3,0:15:16.12:47,16,0	1/1:1,0:9:14.26:41,14,0	0/1:6,10:16:6.56:139,0,7	1/1:7,11:17:6.39:226,6,0	1/1:7,0:22:10.90:72,11,0	1/1:4,12:16:14.07:237,14,0
chr10	46836512	.	G	GT	1448.75	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=0.209;DP=459;FS=0.568;HRun=8;HaplotypeScore=73.5436;InbreedingCoeff=0.9308;MQ=64.85;MQ0=4;MQRankSum=-5.776;QD=21.00;ReadPosRankSum=-0.108;VQSLOD=3.6051;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:69.01:0,69,625	0/0:4,0:4:12.01:0,12,110	0/0:24,0:11:15.97:0,16,173	0/0:18,0:10:15.24:0,15,131	0/0:20,0:20:57:0,57,513	0/0:22,0:22:57.03:0,57,521	0/0:6,0:6:12:0,12,110	0/0:17,0:17:36.01:0,36,329	0/0:16,0:15:33.01:0,33,302	0/0:21,0:20:54.02:0,54,494	0/0:21,1:22:19.29:0,19,431	0/0:13,1:14:4.49:0,4,290	0/0:13,0:13:30.01:0,30,274	0/0:15,0:15:38.98:0,39,346	0/0:15,0:15:35.97:0,36,319	0/0:10,0:10:29.98:0,30,267	0/0:26,0:26:57.01:0,57,521	0/0:24,0:24:60.01:0,60,543	1/1:3,15:18:42.12:485,42,0	1/1:6,12:18:30.09:346,30,0	1/1:2,10:12:24.07:277,24,0	0/0:10,0:10:30.02:0,30,274	0/0:12,0:12:20.79:0,21,191	0/0:13,0:13:33.02:0,33,302	0/0:11,0:11:24:0,24,220	0/0:21,0:21:44.99:0,45,404	1/1:4,17:21:45.11:501,45,0	0/0:10,0:10:14.99:0,15,137
chr10	46836768	.	G	GA	3786.96	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-9.796;DP=615;FS=6.019;HRun=10;HaplotypeScore=67.2736;InbreedingCoeff=0.9543;MQ=71.83;MQ0=4;MQRankSum=-1.633;QD=22.41;ReadPosRankSum=2.445;VQSLOD=4.7268;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,24:31:16.88:590,17,0	0/0:2,0:2:5.99:0,6,49	0/0:47,1:31:35.72:0,36,300	0/0:47,0:27:31.64:0,32,286	0/0:18,0:19:49.96:0,50,399	1/1:2,15:17:24.29:427,24,0	1/1:6,24:29:63.16:672,63,0	0/0:24,0:25:53.91:0,54,443	1/1:2,8:10:15.51:161,16,0	0/0:21,0:23:54.10:0,54,429	0/0:19,1:20:24.93:0,25,408	1/1:2,17:19:42.11:448,42,0	1/1:2,17:20:47.95:494,48,0	0/0:20,0:21:46.98:0,47,375	0/0:15,0:15:29.93:0,30,246	0/0:14,0:13:7.05:0,7,258	0/0:33,0:35:85.03:0,85,678	0/0:23,0:23:32.17:0,32,331	0/0:25,0:23:59.92:0,60,493	0/0:18,0:18:44.95:0,45,369	0/0:17,0:18:46.96:0,47,372	1/1:2,13:15:33.08:351,33,0	1/1:1,11:13:8.28:278,8,0	1/1:1,12:14:35.92:366,36,0	0/0:12,0:12:20.94:0,21,172	0/0:20,0:20:56.93:0,57,468	0/0:32,0:33:91.88:0,92,741	0/0:24,0:26:69.99:0,70,554
chr10	46838017	.	AT	A	6026.25	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=13.576;DP=632;FS=0.000;HRun=10;HaplotypeScore=61.9998;InbreedingCoeff=0.9916;MQ=67.89;MQ0=0;MQRankSum=1.909;QD=20.09;ReadPosRankSum=0.065;VQSLOD=5.5728;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,35:38:92.98:807,93,0	0/0:8,0:8:15.04:0,15,166	0/0:9,0:8:14.80:0,15,127	0/0:11,0:10:20.86:0,21,195	0/0:25,1:26:46.09:0,46,723	1/1:3,11:14:29.97:260,30,0	1/1:4,15:19:41.42:385,41,0	0/0:33,1:34:84.20:0,84,913	1/1:2,14:17:44.02:371,44,0	0/0:20,0:20:57.15:0,57,622	0/0:19,0:19:51.12:0,51,550	1/1:1,20:21:50.99:443,51,0	1/1:6,16:22:14.73:357,15,0	0/0:19,1:20:31.10:0,31,571	0/0:19,0:19:45.10:0,45,481	0/0:35,0:35:96.26:0,96,1060	0/0:26,0:26:51.15:0,51,759	0/0:27,3:30:27.92:0,28,749	1/1:1,25:26:74.92:638,75,0	1/1:4,24:28:65.94:566,66,0	1/1:0,20:20:47.99:417,48,0	1/1:4,15:19:38.97:339,39,0	1/1:5,24:29:62.96:547,63,0	1/1:2,20:22:50.99:443,51,0	0/0:23,0:22:49.02:0,49,533	0/0:34,0:34:87.24:0,87,962	1/1:5,19:25:21.70:453,22,0	0/0:17,1:18:25.06:0,25,494
chr10	46841782	.	GA	G	4045.29	PASS	AC=46;AF=0.852;AN=54;BaseQRankSum=-4.029;DP=235;FS=6.418;HRun=9;HaplotypeScore=35.0123;InbreedingCoeff=0.7390;MQ=85.35;MQ0=0;MQRankSum=-4.887;QD=21.40;ReadPosRankSum=2.563;VQSLOD=3.8405;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,16:18:42.02:384,42,0	0/0:3,0:3:6.02:0,6,69	0/0:17,0:14:12.70:0,13,167	0/0:17,0:13:6.71:0,7,165	1/1:1,10:11:27:247,27,0	1/1:2,7:9:18.01:165,18,0	1/1:0,7:7:21.01:192,21,0	1/1:5,11:12:23.99:215,24,0	1/1:0,2:2:6:55,6,0	1/1:0,14:14:42.02:384,42,0	1/1:1,4:6:9:82,9,0	1/1:0,2:2:6:55,6,0	1/1:0,9:8:24.01:220,24,0	1/1:1,3:3:9:82,9,0	0/0:7,0:7:18.05:0,18,208	1/1:3,6:9:18:165,18,0	1/1:2,13:14:33.02:302,33,0	1/1:0,3:3:3:27,3,0	1/1:1,8:9:23.97:208,24,0	1/1:2,8:10:24.01:220,24,0	1/1:1,5:6:15.01:137,15,0	./.	1/1:1,4:5:12.01:110,12,0	1/1:0,1:1:3:27,3,0	1/1:0,10:10:30.02:274,30,0	1/1:2,9:10:27.01:247,27,0	1/1:2,4:5:12:110,12,0	1/1:0,5:5:15.01:137,15,0
chr10	46841950	.	CA	C	462.80	PASS	AB=0.800;AC=23;AF=0.426;AN=54;BaseQRankSum=-0.234;DP=248;FS=0.785;HRun=16;HaplotypeScore=52.1236;InbreedingCoeff=0.6801;MQ=58.55;MQ0=18;MQRankSum=-0.451;QD=5.51;ReadPosRankSum=3.020;VQSLOD=2.1829;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,11:20:25.21:174,25,0	./.	0/0:44,1:13:4.54:0,5,101	0/0:34,1:12:12.13:0,12,78	0/0:4,0:4:8.02:0,8,40	1/1:0,0:5:8.15:24,8,0	1/1:1,1:8:15.15:53,15,0	0/0:11,0:13:32.10:0,32,205	1/1:0,3:3:5.88:36,6,0	0/0:5,0:4:5.77:0,6,31	0/0:7,0:5:8.17:0,8,41	0/0:1,0:1:0:0,0,0	0/0:2,0:2:3:0,3,25	0/0:7,0:7:11.05:0,11,69	1/1:3,5:7:14.32:89,14,0	0/0:4,0:4:8.17:0,8,40	0/0:11,0:12:22.45:0,22,121	0/0:9,0:10:11.79:0,12,81	1/1:4,3:8:12.87:65,13,0	1/1:3,3:6:8.78:54,9,0	1/1:0,6:6:11.72:72,12,0	0/1:3,1:4:12.02:12,0,19	1/1:0,2:4:9.96:48,10,0	1/1:4,1:5:2.89:18,3,0	0/0:6,0:7:11.51:0,12,70	0/0:5,0:5:11.80:0,12,83	1/1:3,1:5:1.93:6,2,0	0/0:4,0:4:11.36:0,11,57
chr10	46842188	.	A	AG	1266.74	PASS	AB=0.949;AC=18;AF=0.321;AN=56;BaseQRankSum=-0.801;DP=469;FS=6.961;HRun=0;HaplotypeScore=90.8230;InbreedingCoeff=-0.0277;MQ=48.75;MQ0=14;MQRankSum=1.121;QD=5.63;ReadPosRankSum=-2.185;VQSLOD=2.4568;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:84.10:0,84,1061	0/0:6,0:6:12.04:0,12,167	0/0:22,0:5:4.35:0,4,79	0/0:27,0:12:3.15:0,3,45	0/1:13,1:14:29.92:30,0,69	0/0:23,0:22:59.99:0,60,733	0/0:28,0:28:84.08:0,84,1039	0/1:28,0:27:73.70:204,0,74	0/0:12,0:11:33.04:0,33,384	0/1:12,1:13:30.61:78,0,31	0/1:9,0:9:20.70:21,0,31	0/0:15,0:15:38.52:0,39,439	0/0:19,0:17:47.85:0,48,532	0/1:11,0:11:31.62:37,0,32	0/0:19,0:19:44.83:0,45,483	0/1:6,8:14:22.74:23,0,33	0/1:26,0:24:1.90:182,0,2	0/1:17,0:15:16.60:119,0,17	0/1:26,1:26:26.71:297,0,27	1/1:9,0:9:14.74:95,15,0	1/1:13,0:13:2.46:20,2,0	0/0:17,0:17:41.97:0,42,502	0/0:5,0:5:15.05:0,15,191	0/0:19,0:19:35.47:0,35,487	0/1:14,0:14:41.83:42,0,47	0/1:11,0:12:10.08:151,0,10	0/1:16,0:15:27.47:96,0,27	1/1:2,0:2:5.90:37,6,0
chr10	46842877	.	G	GA	1183.47	PASS	AB=0.849;AC=32;AF=0.571;AN=56;BaseQRankSum=-2.242;DP=381;FS=3.126;HRun=16;HaplotypeScore=63.9591;InbreedingCoeff=0.4237;MQ=59.14;MQ0=5;MQRankSum=-3.053;QD=4.48;ReadPosRankSum=-5.459;VQSLOD=-0.1456;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:32:17.24:0,17,59	0/0:3,1:4:2.03:0,2,6	0/1:10,0:7:1.37:1,0,39	0/0:6,0:5:2.47:0,2,37	1/1:3,13:16:12.34:86,12,0	0/0:4,0:11:13.21:0,13,37	0/0:14,0:24:12.07:0,12,44	1/1:12,11:24:30.48:214,30,0	0/0:7,0:13:7.26:0,7,20	1/1:5,5:14:6.63:32,7,0	1/1:9,2:11:2.21:81,2,0	0/1:10,0:15:7.85:11,0,8	0/1:9,0:10:4.65:5,0,7	0/1:4,6:9:0:0,0,0	0/1:7,6:13:9.22:21,0,9	1/1:2,10:13:17.72:123,18,0	0/1:25,2:27:4.56:188,0,5	1/1:3,0:3:8.78:54,9,0	1/1:5,3:8:1.25:4,1,0	1/1:6,11:17:21.45:135,21,0	1/1:7,1:9:7.03:32,7,0	0/1:7,0:9:0:0,0,0	0/0:7,0:9:11.52:0,12,43	0/0:9,0:15:8.84:0,9,33	1/1:9,0:8:14.83:108,15,0	1/1:15,2:15:1.49:84,1,0	0/1:2,9:11:3.90:33,0,4	1/1:7,3:12:14.12:139,14,0
chr10	46843364	.	TA	T	263.32	PASS	AB=1.000;AC=5;AF=0.093;AN=54;BaseQRankSum=1.692;DP=342;FS=12.682;HRun=8;HaplotypeScore=54.4691;InbreedingCoeff=0.7027;MQ=65.20;MQ0=7;MQRankSum=2.706;QD=10.13;ReadPosRankSum=0.326;VQSLOD=0.6397;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,99,1177	1/1:0,6:6:18.03:174,18,0	0/0:9,0:7:5.80:0,6,137	0/1:11,0:8:11.09:11,0,132	0/0:5,0:5:15.05:0,15,181	0/0:20,0:20:60.14:0,60,708	0/0:4,0:4:12.04:0,12,145	0/0:25,0:25:66.20:0,66,797	0/0:9,0:9:24.07:0,24,290	0/0:19,0:19:42.13:0,42,505	0/0:6,0:5:12.04:0,12,145	0/0:8,0:8:21.06:0,21,254	0/0:7,0:6:17.97:0,18,185	0/0:10,0:10:30.09:0,30,362	1/1:1,8:9:21.03:203,21,0	0/0:6,0:6:15.05:0,15,180	0/0:23,0:23:60.18:0,60,725	0/0:21,0:21:51.16:0,51,616	0/0:20,0:17:54.15:0,54,641	0/0:12,0:11:24.06:0,24,274	0/0:8,0:8:21.06:0,21,254	./.	0/0:6,0:6:15.05:0,15,181	0/0:6,0:6:15.05:0,15,181	0/0:18,0:17:42.13:0,42,507	0/0:12,0:11:27.08:0,27,326	0/0:19,0:19:48.09:0,48,550	0/0:8,0:8:24.07:0,24,290
chr10	46843448	.	A	AG	38.82	PASS	AC=8;AF=0.667;AN=12;BaseQRankSum=-1.754;DP=13;FS=0.000;HRun=0;HaplotypeScore=14.2366;MQ=128.33;MQ0=0;MQRankSum=-1.754;QD=7.76;ReadPosRankSum=-0.550;VQSLOD=2.9213;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,2:2:3.01:31,3,0	./.	0/0:3,0:2:4.77:0,5,24	0/0:2,0:2:2.74:0,3,12	./.	./.	./.	./.	1/1:0,1:1:2.96:19,3,0	1/1:0,1:1:3.01:34,3,0	./.	./.	./.	./.	./.	./.	./.	./.	./.	1/1:0,1:1:3.01:33,3,0	./.	./.	./.	./.	./.	./.	./.	./.
chr10	46843778	.	G	GC	3542.74	PASS	AB=0.920;AC=41;AF=0.788;AN=52;BaseQRankSum=0.420;DP=370;FS=10.525;HRun=9;HaplotypeScore=48.8280;InbreedingCoeff=0.2619;MQ=56.82;MQ0=14;MQRankSum=-1.498;QD=10.83;ReadPosRankSum=1.405;VQSLOD=1.2210;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:23:38.21:169,38,0	0/0:2,0:2:3:0,3,26	0/0:20,0:8:20.93:0,21,169	0/1:24,0:9:4.76:5,0,45	1/1:4,1:4:3.01:33,3,0	0/1:19,0:19:18.82:124,0,19	1/1:23,0:23:29.83:134,30,0	1/1:8,1:6:3.01:33,3,0	1/1:16,0:16:11.25:122,11,0	1/1:1,4:5:12.02:125,12,0	1/1:1,3:4:3.01:33,3,0	1/1:22,0:22:16.81:175,17,0	0/1:11,0:11:5.79:69,0,6	1/1:4,15:19:33.09:362,33,0	0/0:18,0:18:7.09:0,7,280	1/1:3,13:16:29.89:296,30,0	1/1:5,12:17:30.03:317,30,0	1/1:3,10:12:33.06:353,33,0	0/1:3,4:7:11:117,0,11	1/1:3,1:3:3.01:33,3,0	1/1:7,14:21:24.02:252,24,0	./.	./.	0/1:19,0:19:16.95:55,0,17	1/1:4,9:13:18.05:199,18,0	1/1:5,9:14:21.01:209,21,0	1/1:2,11:12:1.02:239,1,0	1/1:4,4:7:8.98:86,9,0
chr10	46843787	.	C	CT	3543.76	PASS	AB=1.000;AC=34;AF=0.654;AN=52;BaseQRankSum=0.920;DP=352;FS=11.183;HRun=7;HaplotypeScore=55.6383;InbreedingCoeff=0.0717;MQ=56.86;MQ0=4;MQRankSum=-0.840;QD=11.36;ReadPosRankSum=5.700;VQSLOD=0.7787;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,20:22:42.13:498,42,0	0/0:3,0:3:5.99:0,6,52	0/0:16,0:11:29.04:0,29,249	0/1:16,0:9:27.11:27,0,93	0/1:6,0:5:2.89:3,0,12	1/1:4,15:19:39.12:461,39,0	1/1:0,20:21:33.07:377,33,0	0/1:8,0:7:3.75:4,0,15	1/1:1,13:14:33.03:372,33,0	0/1:5,0:5:6.39:6,0,17	1/1:3,0:3:2.80:13,3,0	1/1:2,21:23:51.16:604,51,0	1/1:3,9:12:24.71:288,25,0	1/1:18,0:17:30.49:153,30,0	0/0:20,0:20:42.53:0,43,448	1/1:12,2:14:11.17:162,11,0	0/1:21,0:21:14.44:69,0,14	1/1:12,0:12:1.83:52,2,0	0/1:10,0:10:15.62:16,0,102	0/1:2,0:2:2.01:2,0,15	0/1:20,0:20:27.73:28,0,38	./.	./.	1/1:3,12:15:20.42:265,20,0	0/1:9,0:9:5.68:38,0,6	0/1:14,0:14:28.07:28,0,30	0/1:20,0:20:66.30:67,0,66	0/1:7,0:6:9.32:9,0,17
chr10	46844250	.	G	GT	2862	PASS	AB=0.864;AC=29;AF=0.518;AN=56;BaseQRankSum=-3.672;DP=624;FS=16.428;HRun=14;HaplotypeScore=78.4885;InbreedingCoeff=0.3745;MQ=79.04;MQ0=9;MQRankSum=0.751;QD=6.56;ReadPosRankSum=-1.707;VQSLOD=0.5385;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,1:29:22.87:0,23,274	0/1:5,1:6:11.55:12,0,62	0/1:68,1:26:1.49:1,0,55	0/1:74,0:37:21.52:22,0,39	1/1:7,17:29:36.82:373,37,0	0/1:12,1:13:3.71:4,0,98	0/0:24,0:24:6.54:0,7,187	1/1:7,20:29:58.26:448,58,0	0/0:10,1:11:3.27:0,3,147	1/1:6,8:16:18.61:189,19,0	1/1:13,5:18:38.58:297,39,0	0/1:16,1:18:49.94:78,0,50	0/1:16,0:16:20.68:21,0,76	1/1:3,6:10:11.84:93,12,0	0/0:19,0:21:28.65:0,29,221	1/1:4,17:21:13.74:244,14,0	1/1:7,17:30:29.70:454,30,0	1/1:3,10:15:20.99:182,21,0	0/0:15,0:15:23.51:0,24,151	0/0:8,0:9:16.80:0,17,101	0/0:21,0:21:2.14:0,2,95	0/1:4,0:6:9.50:24,0,10	0/1:8,3:11:11.67:12,0,62	0/0:28,0:32:45.64:0,46,407	0/1:3,8:11:1.77:97,0,2	1/1:4,13:18:16.67:258,17,0	0/0:24,2:26:17.89:0,18,242	1/1:6,13:21:16.41:245,16,0
chr10	46844549	.	C	CA	4654.73	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=-10.088;DP=600;FS=0.000;HRun=8;HaplotypeScore=66.9112;InbreedingCoeff=0.9199;MQ=74.69;MQ0=0;MQRankSum=0.055;QD=21.65;ReadPosRankSum=1.975;VQSLOD=5.2703;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,33:37:62.63:956,63,0	0/0:7,0:7:18:0,18,165	0/1:40,0:24:14.50:15,0,176	0/0:20,0:15:17.93:0,18,156	0/0:29,0:29:75.02:0,75,679	1/1:4,22:26:60.16:681,60,0	1/1:2,10:12:30.08:333,30,0	0/0:27,0:26:77.94:0,78,699	1/1:2,10:12:27.08:311,27,0	0/0:22,0:22:56.96:0,57,507	0/0:24,0:24:59.99:0,60,539	1/1:2,20:22:48.14:549,48,0	1/1:2,11:13:33.08:371,33,0	0/0:16,0:16:32.98:0,33,292	0/0:22,0:22:51:0,51,462	0/0:28,0:28:74.35:0,74,657	0/0:26,0:26:74.92:0,75,665	0/0:27,0:27:66:0,66,599	0/0:26,0:26:53.99:0,54,488	0/0:19,0:19:54:0,54,487	0/0:13,0:13:26.29:0,26,246	1/1:1,15:16:39.59:451,40,0	1/1:3,19:23:48.14:550,48,0	1/1:1,12:14:39.10:439,39,0	0/0:11,0:11:26.98:0,27,240	0/0:28,0:28:74.96:0,75,673	0/0:24,0:24:66.03:0,66,604	0/0:16,0:16:48.03:0,48,439
chr10	46845158	.	TTCTCTC	T	747.78	PASS	AC=10;AF=0.294;AN=34;BaseQRankSum=2.819;DP=383;FS=18.210;HRun=0;HaplotypeScore=69.9345;InbreedingCoeff=0.6014;MQ=71.02;MQ0=18;MQRankSum=-2.511;QD=11.33;ReadPosRankSum=1.819;VQSLOD=0.6938;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:10,4:13:6.02:116,6,0	0/0:5,0:5:1.36:0,1,4	./.	0/0:22,0:11:0:0,0,0	./.	./.	./.	0/0:26,0:23:9.03:0,9,151	1/1:9,4:13:15.05:284,15,0	0/0:17,0:17:10.28:0,10,172	./.	1/1:15,3:16:11.92:198,12,0	1/1:10,4:14:12.04:210,12,0	./.	./.	0/0:16,0:16:6.95:0,7,74	0/0:14,0:12:9.03:0,9,112	0/0:17,0:15:6.01:0,6,67	0/0:15,0:15:5.61:0,6,45	./.	0/0:21,0:19:6.02:0,6,75	./.	1/1:5,0:6:5.51:66,6,0	./.	./.	0/0:12,0:12:6:0,6,108	0/0:11,0:11:2.99:0,3,24	0/0:9,0:7:3.01:0,3,94
chr10	46845587	.	A	AGCTTCCCACGG	1428.82	PASS	AB=0.686;AC=18;AF=0.900;AN=20;BaseQRankSum=-2.261;DP=25;FS=11.996;HRun=0;HaplotypeScore=22.9597;InbreedingCoeff=-0.2512;MQ=149.29;MQ0=0;MQRankSum=-1.558;QD=62.12;ReadPosRankSum=-0.653;VQSLOD=1.4039;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,0:2:3.01:47,3,0	./.	0/1:1,1:4:23.27:406,0,23	0/1:3,0:4:39.75:160,0,40	./.	./.	./.	1/1:2,0:2:6.01:83,6,0	./.	./.	./.	./.	./.	./.	1/1:1,0:1:3.01:40,3,0	./.	1/1:1,0:1:2.98:22,3,0	./.	./.	./.	./.	./.	1/1:1,0:2:6.01:172,6,0	1/1:3,0:3:6:68,6,0	1/1:0,0:1:3.01:148,3,0	1/1:1,0:3:9.03:368,9,0	./.	./.
chr10	46848251	.	CT	C	1410.33	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=5.395;DP=332;FS=0.689;HRun=4;HaplotypeScore=49.5109;InbreedingCoeff=0.9061;MQ=65.62;MQ0=2;MQRankSum=-0.258;QD=20.15;ReadPosRankSum=1.031;VQSLOD=2.7799;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,10:19:41.62:419,42,0	0/0:2,0:2:6.02:0,6,83	0/0:7,0:6:18.04:0,18,230	0/0:7,0:5:11.97:0,12,141	0/0:14,0:14:18.06:0,18,249	0/0:7,0:7:18.06:0,18,249	0/0:3,0:3:9.03:0,9,125	0/0:32,0:30:75.25:0,75,1033	1/1:2,7:11:29.99:328,30,0	0/0:9,0:9:22.63:0,23,295	0/0:8,0:8:12:0,12,144	1/1:2,7:11:27:305,27,0	1/1:0,5:5:12.04:144,12,0	0/0:8,0:8:21.06:0,21,273	0/0:6,0:6:11.47:0,11,98	0/0:13,0:13:34.66:0,35,460	0/0:28,0:28:57.02:0,57,736	0/0:17,0:17:32.54:0,33,421	0/0:21,0:21:51.17:0,51,705	0/0:7,0:7:21.07:0,21,291	0/0:12,0:12:30.08:0,30,397	1/1:2,6:8:11.87:144,12,0	1/1:1,6:7:8.43:81,8,0	1/1:1,8:9:15.05:180,15,0	0/0:10,0:10:18.06:0,18,249	0/0:17,1:18:7.67:0,8,489	0/0:12,0:12:30.09:0,30,397	0/0:21,0:21:40.78:0,41,509
chr10	46848252	.	TTTTATTTATTTATTTA	T	1709.97	PASS	AB=1.000;AC=24;AF=0.545;AN=44;BaseQRankSum=1.774;DP=324;FS=23.122;HRun=0;HaplotypeScore=139.7196;InbreedingCoeff=0.3092;MQ=65.63;MQ0=2;MQRankSum=-1.290;QD=7.99;ReadPosRankSum=-3.142;VQSLOD=0.0411;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:18,0:18:41.10:41,0,95	0/0:2,0:2:3.01:0,3,98	./.	0/1:7,0:5:0:0,0,0	1/1:10,4:14:12.04:142,12,0	0/0:6,0:7:13.25:0,13,256	./.	1/1:31,0:29:3:28,3,0	0/1:11,0:11:35.44:35,0,125	1/1:8,1:9:3.01:131,3,0	1/1:5,3:8:5.98:55,6,0	0/1:11,0:11:38.90:39,0,58	0/0:5,0:5:3.01:0,3,33	./.	0/0:3,0:6:9.03:0,9,145	1/1:12,1:13:3.01:131,3,0	1/1:21,8:29:12.91:447,13,0	1/1:11,6:17:5.66:205,6,0	0/0:20,0:20:12.03:0,12,575	./.	./.	0/0:6,0:6:0.47:0,0,1	0/0:7,0:7:2.99:0,3,25	./.	1/1:7,2:9:3.01:74,3,0	1/1:17,1:18:3.01:131,3,0	0/0:9,0:12:3.01:0,3,209	1/1:14,5:19:9.03:392,9,0
chr10	46848312	.	GACA	G	4841.18	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=7.653;DP=297;FS=0.508;HRun=0;HaplotypeScore=58.8362;InbreedingCoeff=0.9577;MQ=77.88;MQ0=0;MQRankSum=-8.406;QD=47.00;ReadPosRankSum=2.321;VQSLOD=6.4721;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,19:19:54.18:898,54,0	0/0:7,0:7:21.07:0,21,476	0/0:18,0:17:51.18:0,51,1135	0/0:7,0:7:21.07:0,21,468	0/0:10,0:10:30.06:0,30,631	1/1:0,9:9:27.09:449,27,0	1/1:0,1:1:3.01:50,3,0	0/0:22,0:22:66.23:0,66,1465	1/1:0,10:10:30.10:499,30,0	0/0:7,0:7:21.07:0,21,475	0/0:6,0:6:18.06:0,18,407	1/1:0,9:9:21.07:350,21,0	1/1:0,7:7:21.07:349,21,0	0/0:8,0:8:24.08:0,24,540	0/0:8,0:8:24.08:0,24,536	0/0:13,0:13:39.13:0,39,883	0/0:26,0:26:60.16:0,60,1358	0/0:27,0:27:63.22:0,63,1416	1/1:0,9:9:27.09:449,27,0	1/1:0,5:5:15.05:249,15,0	1/1:0,8:8:21.07:350,21,0	1/1:0,6:6:18.06:299,18,0	1/1:0,6:6:18.06:299,18,0	1/1:0,5:5:9.03:150,9,0	0/0:14,0:14:39.13:0,39,878	0/0:8,0:8:24.08:0,24,544	1/1:0,9:9:27.09:449,27,0	0/0:13,0:13:33.11:0,33,730
chr10	46849114	.	TACACACACACACACAC	T	3657.60	PASS	AC=20;AF=0.385;AN=52;BaseQRankSum=8.377;DP=594;FS=43.857;HRun=0;HaplotypeScore=221.3729;InbreedingCoeff=0.7975;MQ=61.82;MQ0=15;MQRankSum=-4.172;QD=19.66;ReadPosRankSum=-0.559;VQSLOD=1.4991;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:33:48.14:0,48,2041	0/0:5,0:5:2.99:0,3,23	./.	./.	0/0:11,1:13:0.47:0,0,1	0/0:19,0:19:15.52:0,16,978	0/0:25,0:26:21.05:0,21,1250	1/1:22,4:24:11.19:134,11,0	0/0:11,0:12:12.98:0,13,518	1/1:10,6:16:15.03:376,15,0	1/1:8,6:14:5.79:218,6,0	0/0:20,0:22:30.08:0,30,1327	0/0:18,0:17:21.07:0,21,1114	1/1:8,8:16:7.30:350,7,0	0/0:19,0:19:24.08:0,24,1201	1/1:13,12:25:25.02:1014,25,0	1/1:14,7:22:11.85:461,12,0	1/1:14,5:19:2.74:131,3,0	0/0:13,0:13:11.25:0,11,504	0/0:13,0:13:18.53:0,19,934	0/0:59,0:58:67.15:0,67,3752	0/0:16,0:24:33.11:0,33,1543	0/0:6,0:7:6.02:0,6,309	0/0:22,0:31:21.07:0,21,1085	1/1:11,5:16:6.02:263,6,0	1/1:17,7:24:6.83:447,7,0	0/0:17,0:17:27.05:0,27,1255	1/1:3,5:8:6.02:263,6,0
chr10	46850419	.	T	TG	1123.67	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-7.290;DP=720;FS=2.206;HRun=6;HaplotypeScore=71.9951;InbreedingCoeff=0.9877;MQ=92.13;MQ0=0;MQRankSum=-4.088;QD=26.75;ReadPosRankSum=0.248;VQSLOD=4.0364;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,123,1250	0/0:7,0:7:18.04:0,18,184	0/0:35,0:35:86.89:0,87,809	0/0:26,0:27:56.50:0,56,581	0/0:24,0:24:53.91:0,54,533	1/1:2,19:21:51.16:642,51,0	1/1:3,18:21:48.15:604,48,0	0/0:30,0:30:84.19:0,84,857	0/0:22,0:22:56.16:0,56,557	0/0:35,0:35:90.18:0,90,906	0/0:15,0:15:45.10:0,45,459	0/0:29,0:29:78.17:0,78,795	0/0:14,0:14:42.09:0,42,425	0/0:21,0:21:57.10:0,57,573	0/0:38,0:38:99:0,108,1089	0/0:32,0:32:90.17:0,90,910	0/0:40,0:40:99:0,114,1162	0/0:30,0:30:81.16:0,81,818	0/0:23,0:23:57.11:0,57,575	0/0:23,0:23:69.14:0,69,696	0/0:42,0:42:99:0,120,1197	0/0:16,0:16:45.10:0,45,459	0/0:16,0:16:45.10:0,45,459	0/0:25,0:25:69.11:0,69,688	0/0:16,0:16:39.08:0,39,398	0/0:42,0:42:99:0,105,1046	0/0:28,0:28:72.16:0,72,734	0/0:5,0:5:15.03:0,15,153
chr10	46851159	.	TGGTTC	T	1733.54	PASS	AB=0.906;AC=19;AF=0.500;AN=38;BaseQRankSum=-0.025;DP=336;FS=9.387;HRun=0;HaplotypeScore=121.3084;InbreedingCoeff=-0.5880;MQ=35.27;MQ0=45;MQRankSum=0.086;QD=5.88;ReadPosRankSum=-2.197;VQSLOD=1.5643;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:6,0:4:0.06:0,0,14	0/1:28,1:1:0:0,0,0	0/0:30,0:2:5.38:0,5,49	0/1:16,1:18:12.34:160,0,12	./.	./.	0/1:29,1:28:65.37:306,0,65	./.	0/1:16,1:20:18.42:310,0,18	0/1:13,1:15:12.94:152,0,13	./.	./.	0/1:13,0:14:17.44:85,0,17	0/1:14,0:15:47.16:47,0,206	0/1:21,0:21:99:138,0,102	1/1:13,2:15:6.61:75,7,0	0/1:7,0:8:11.97:12,0,27	0/1:9,3:12:98.71:99,0,181	0/1:16,0:16:19.89:20,0,238	0/1:10,0:10:17.45:27,0,17	./.	./.	./.	0/1:8,0:9:12.51:66,0,13	1/1:19,0:17:8.38:256,8,0	0/1:25,0:23:46.07:46,0,229	0/1:8,2:9:28.53:54,0,29
chr10	46851163	.	TC	T	2149.59	PASS	AB=0.988;AC=29;AF=0.806;AN=36;BaseQRankSum=2.443;DP=327;FS=4.919;HRun=1;HaplotypeScore=100.8751;InbreedingCoeff=-0.0168;MQ=31.95;MQ0=47;MQRankSum=-0.395;QD=8.02;ReadPosRankSum=2.420;VQSLOD=1.1587;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	1/1:6,1:5:4.22:24,4,0	./.	0/0:30,0:2:2.92:0,3,17	1/1:16,2:17:29.86:180,30,0	./.	./.	1/1:22,7:26:48.40:330,48,0	./.	1/1:17,2:19:47.84:265,48,0	1/1:13,2:15:15.84:127,16,0	./.	./.	1/1:14,0:13:22.37:127,22,0	0/1:17,0:16:25.42:25,0,54	1/1:18,2:19:31.31:227,31,0	1/1:16,2:15:25.03:171,25,0	1/1:6,1:7:6.43:48,6,0	0/1:11,0:11:34.52:35,0,41	0/1:15,1:16:61:61,0,81	0/1:10,0:10:20.06:20,0,38	./.	./.	./.	1/1:10,0:9:23.68:156,24,0	1/1:18,3:19:42.80:255,43,0	0/1:27,0:24:99:115,0,113	1/1:9,0:8:14.86:105,15,0
chr10	46851174	.	TGGTTC	T	6479.46	PASS	AB=0.736;AC=32;AF=0.941;AN=34;BaseQRankSum=-3.558;DP=301;FS=0.000;HRun=0;HaplotypeScore=91.8677;InbreedingCoeff=-0.0666;MQ=27.82;MQ0=53;MQRankSum=0.313;QD=26.77;ReadPosRankSum=-3.203;VQSLOD=3.9537;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	1/1:7,0:7:12:155,12,0	./.	./.	1/1:4,5:11:15.93:204,16,0	./.	./.	1/1:1,15:21:50.85:779,51,0	./.	1/1:4,6:19:55.37:829,55,0	1/1:2,9:13:27.07:454,27,0	./.	./.	1/1:1,2:12:21.04:291,21,0	0/1:11,2:16:4.55:271,0,5	1/1:2,2:11:28.11:393,28,0	1/1:6,7:14:17.69:258,18,0	1/1:4,4:8:9.03:155,9,0	0/1:7,3:10:23.08:205,0,23	1/1:5,4:14:13.34:412,13,0	1/1:4,1:7:12.88:180,13,0	./.	./.	./.	1/1:0,4:6:15.05:298,15,0	1/1:3,12:21:56.40:850,56,0	1/1:11,3:20:36.87:559,37,0	1/1:3,4:9:13.59:186,14,0
chr10	46851394	.	G	GTGAGGA	14420.36	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-4.335;DP=627;FS=15.956;HRun=0;HaplotypeScore=121.4544;InbreedingCoeff=0.9978;MQ=86.17;MQ0=1;MQRankSum=-16.648;QD=77.53;ReadPosRankSum=-0.903;VQSLOD=4.6631;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,24:35:69.24:2403,69,0	0/0:10,0:10:30.10:0,30,721	0/0:22,0:22:57.20:0,57,1332	0/0:27,0:27:63.96:0,64,1764	0/0:11,0:11:27.09:0,27,611	1/1:3,10:15:36.12:1102,36,0	1/1:9,18:28:75.26:2523,75,0	0/0:23,0:23:60.19:0,60,1340	1/1:5,11:21:45.15:1521,45,0	0/0:17,0:17:48.15:0,48,1091	0/0:9,0:9:24.08:0,24,577	1/1:3,24:28:69.24:2337,69,0	1/1:1,14:15:36.12:1290,36,0	0/0:35,0:35:96.33:0,96,2307	0/0:32,0:32:93.31:0,93,2188	0/0:24,0:24:69.22:0,69,1610	0/0:23,0:23:69.22:0,69,1612	0/0:36,0:36:99:0,99,2323	0/0:16,0:16:48.14:0,48,1103	0/0:24,0:24:69.24:0,69,1659	0/0:63,0:63:99:0,184,4368	1/1:2,16:19:51.18:1791,51,0	1/1:5,8:13:21.07:751,21,0	1/1:4,5:11:21.07:702,21,0	0/0:16,0:16:48.14:0,48,1104	0/0:17,0:16:48.15:0,48,1099	0/0:27,0:26:66.23:0,66,1558	0/0:9,0:9:24.08:0,24,577
chr10	46860107	.	GGTGTGTGTGTGTGT	G	4030.23	PASS	AB=1.000;AC=38;AF=0.704;AN=54;BaseQRankSum=4.921;DP=448;FS=29.604;HRun=0;HaplotypeScore=166.8657;InbreedingCoeff=0.2401;MQ=61.29;MQ0=16;MQRankSum=-0.796;QD=11.55;ReadPosRankSum=0.740;VQSLOD=1.2375;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:20,1:21:3.01:117,3,0	1/1:4,0:3:2.37:8,2,0	0/0:24,0:16:2.98:0,3,22	0/0:26,0:10:6.02:0,6,83	0/0:8,0:8:2.98:0,3,22	0/0:15,0:15:3:0,3,37	1/1:10,0:10:5.93:96,6,0	0/0:22,0:21:11.91:0,12,121	1/1:7,3:10:9.03:346,9,0	0/1:11,0:11:10.89:11,0,77	1/1:14,0:14:2.84:14,3,0	1/1:13,2:13:15.05:436,15,0	1/1:14,2:16:15.05:454,15,0	1/1:14,0:14:3.01:95,3,0	1/1:18,0:18:11.83:396,12,0	0/1:16,0:16:9.92:356,0,10	0/1:20,0:18:41.91:206,0,42	1/1:17,0:15:15.01:239,15,0	0/1:14,0:11:0.40:10,0,0	1/1:13,0:13:6.02:184,6,0	0/1:51,0:49:0:234,0,0	1/1:7,0:6:0.47:1,0,0	1/1:8,2:9:6.47:74,6,0	1/1:16,2:17:12.47:294,12,0	1/1:12,0:12:2.88:93,3,0	0/1:22,0:22:36.79:84,0,37	1/1:16,0:16:15.04:283,15,0	./.
chr10	46860137	.	TGTGTGTGTGTGTGTGTGCGC	T	5525.85	PASS	AB=1.000;AC=36;AF=0.667;AN=54;BaseQRankSum=3.047;DP=477;FS=3.061;HRun=0;HaplotypeScore=204.2046;InbreedingCoeff=-0.1692;MQ=45.95;MQ0=30;MQRankSum=0.527;QD=12.28;ReadPosRankSum=1.440;VQSLOD=3.9476;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:28:6.45:160,6,0	1/1:8,0:7:5.11:162,5,0	0/0:5,0:1:3.01:0,3,45	0/0:13,0:3:9.03:0,9,164	0/0:7,0:7:3.01:0,3,46	0/1:20,0:20:17.46:17,0,103	0/1:10,0:10:12.19:96,0,12	0/1:19,0:17:99:220,0,335	1/1:18,0:18:14.86:457,15,0	0/1:14,0:13:99:228,0,219	0/1:12,0:11:24.64:25,0,42	1/1:19,0:18:15.14:407,15,0	1/1:14,0:14:18.90:427,19,0	1/1:14,0:13:3.01:32,3,0	1/1:3,17:20:11.72:624,12,0	0/1:21,0:21:34.85:110,0,35	0/1:23,0:21:88:88,0,226	0/1:16,0:14:81.30:153,0,81	0/1:10,0:8:40.51:82,0,41	1/1:15,1:16:6.02:242,6,0	1/1:59,0:52:19.34:828,19,0	1/1:11,0:10:3:25,3,0	0/1:14,0:12:18:59,0,18	1/1:24,0:21:13.41:337,13,0	1/1:14,0:14:2.87:32,3,0	0/1:25,0:24:99:510,0,199	0/1:19,0:17:7.11:206,0,7	./.
chr10	46860139	.	TGTGTGTGTGTGTGTGCGC	T	7059.61	PASS	AB=0.994;AC=39;AF=0.750;AN=52;BaseQRankSum=3.425;DP=468;FS=2.717;HRun=0;HaplotypeScore=184.5662;InbreedingCoeff=0.0371;MQ=45.86;MQ0=30;MQRankSum=1.612;QD=16.38;ReadPosRankSum=3.175;VQSLOD=3.6569;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:28:6.43:172,6,0	1/1:8,0:7:5.11:103,5,0	0/0:6,0:1:2.98:0,3,22	0/0:12,0:2:6.02:0,6,83	0/0:7,0:7:2.98:0,3,22	0/1:17,0:17:20.55:21,0,33	1/1:10,0:10:7.80:115,8,0	0/1:19,0:16:99:344,0,176	1/1:17,0:17:14.48:471,14,0	0/1:14,0:13:73.37:264,0,73	0/1:12,0:11:15.67:25,0,16	1/1:21,0:20:15.88:515,16,0	1/1:11,0:11:24.06:552,24,0	1/1:14,0:13:3.01:58,3,0	1/1:18,1:19:11.83:568,12,0	0/1:21,0:21:9.92:214,0,10	0/1:22,1:21:62.19:175,0,62	1/1:15,0:13:9.20:384,9,0	1/1:10,0:8:3.83:163,4,0	1/1:15,1:16:6.02:234,6,0	1/1:58,0:51:59.85:1223,60,0	./.	1/1:13,0:11:6.95:75,7,0	1/1:24,0:21:12.47:351,12,0	1/1:15,0:15:2.88:58,3,0	0/1:25,0:24:33.22:600,0,33	1/1:18,1:17:15.05:373,15,0	./.
chr10	46860141	.	TGTGTGTGTGTGTGCGC	T	7844.99	PASS	AB=1.000;AC=44;AF=0.917;AN=48;BaseQRankSum=2.925;DP=443;FS=3.304;HRun=0;HaplotypeScore=163.5031;InbreedingCoeff=0.1105;MQ=46.55;MQ0=28;MQRankSum=2.331;QD=19.18;ReadPosRankSum=1.751;VQSLOD=3.4114;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:24:6.48:143,6,0	1/1:8,0:7:5.08:69,5,0	./.	0/0:10,0:1:2.98:0,3,21	./.	1/1:17,0:17:6:57,6,0	1/1:10,0:10:9.02:170,9,0	0/1:17,0:14:43.90:419,0,44	1/1:15,0:15:14.75:390,15,0	0/1:12,0:11:6.95:330,0,7	1/1:12,0:11:4.82:36,5,0	1/1:17,0:17:16.37:399,16,0	1/1:11,0:11:24.06:508,24,0	1/1:14,0:13:3.01:84,3,0	1/1:19,0:19:11.85:492,12,0	1/1:20,0:20:12.04:334,12,0	1/1:21,0:19:17.67:318,18,0	1/1:15,0:13:39.04:511,39,0	1/1:3,5:7:14.40:232,14,0	1/1:4,12:16:6.02:266,6,0	1/1:57,0:50:79.18:1427,79,0	./.	1/1:13,0:11:3.94:28,4,0	1/1:22,0:19:9.93:259,10,0	1/1:15,0:15:2.88:84,3,0	1/1:25,0:24:40.65:769,41,0	1/1:3,16:17:15.05:520,15,0	./.
chr10	46860143	.	TGTGTGTGTGTGCGC	T	7814.02	PASS	AC=46;AF=1.000;AN=46;BaseQRankSum=1.858;DP=429;FS=5.772;HRun=0;HaplotypeScore=154.8468;InbreedingCoeff=0.0056;MQ=46.57;MQ0=27;MQRankSum=0.591;QD=19.63;ReadPosRankSum=1.414;VQSLOD=3.3751;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:23:6.48:125,6,0	1/1:8,0:7:4.75:51,5,0	./.	./.	./.	1/1:14,0:14:6.02:77,6,0	1/1:11,0:11:9.02:204,9,0	1/1:16,0:13:9.17:432,9,0	1/1:15,0:15:14.53:333,15,0	1/1:2,11:12:30.08:470,30,0	1/1:2,10:11:6.02:80,6,0	1/1:18,0:18:16.61:297,17,0	1/1:11,0:11:24.06:404,24,0	1/1:1,13:13:3.01:129,3,0	1/1:19,0:19:11.83:437,12,0	1/1:3,16:19:12.04:515,12,0	1/1:22,0:20:17.75:395,18,0	1/1:13,2:13:36.98:645,37,0	1/1:8,0:7:13.69:170,14,0	1/1:14,0:14:6.02:219,6,0	1/1:54,0:47:76.78:1192,77,0	./.	1/1:12,0:10:2.51:8,3,0	1/1:21,0:18:6.49:194,6,0	1/1:2,12:14:2.88:129,3,0	1/1:5,19:23:52.47:935,52,0	1/1:19,0:17:15.05:373,15,0	./.
chr10	46865265	.	G	GT	531.32	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=-3.769;DP=649;FS=9.705;HRun=12;HaplotypeScore=69.5653;InbreedingCoeff=0.7113;MQ=67.01;MQ0=1;MQRankSum=0.658;QD=10.22;ReadPosRankSum=-0.858;VQSLOD=1.9733;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,3:38:51:0,51,523	1/1:1,8:9:21.03:204,21,0	0/0:13,1:14:5.65:0,6,117	0/0:7,0:8:1.67:0,2,11	0/0:37,1:38:68.82:0,69,650	0/0:25,0:25:31.64:0,32,365	0/0:21,0:21:50.64:0,51,369	0/0:35,0:35:56.49:0,56,413	0/0:19,0:19:41.71:0,42,304	0/0:23,0:23:52.21:0,52,370	0/0:17,0:16:32.77:0,33,241	0/0:21,0:21:47.59:0,48,346	0/0:22,0:22:42.11:0,42,305	0/0:20,0:20:41.70:0,42,304	1/1:5,28:33:29.24:445,29,0	0/0:44,0:44:95.24:0,95,692	0/0:25,0:25:62.07:0,62,446	0/0:13,1:16:10.66:0,11,220	0/0:19,0:19:47.68:0,48,348	0/0:14,0:16:22.59:0,23,149	0/0:25,0:25:56.52:0,57,407	0/1:10,0:10:4.40:4,0,99	0/0:15,0:15:29.79:0,30,219	0/0:22,0:21:56.08:0,56,402	0/0:31,0:31:66.29:0,66,478	0/0:32,0:32:47.86:0,48,440	0/0:27,1:28:45.33:0,45,494	0/0:21,0:22:49.70:0,50,356
chr10	46865460	.	TTTAGTC	T	10120.64	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=15.539;DP=573;FS=0.000;HRun=0;HaplotypeScore=124.1745;InbreedingCoeff=0.9966;MQ=59.38;MQ0=0;MQRankSum=-16.811;QD=57.18;ReadPosRankSum=0.197;VQSLOD=5.0573;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,24:23:51.17:1192,51,0	0/0:7,0:7:21.07:0,21,749	0/0:12,0:12:36.11:0,36,1001	0/0:13,0:10:27.09:0,27,869	0/0:22,0:22:66.23:0,66,2323	1/1:0,30:30:69.24:1682,69,0	1/1:0,13:13:33.11:818,33,0	0/0:29,0:29:87.30:0,87,2957	1/1:0,21:21:63.22:1512,63,0	0/0:16,0:16:48.15:0,48,1586	0/0:27,0:27:81.26:0,81,2919	1/1:1,28:29:72.25:1712,72,0	1/1:0,16:16:35.99:896,36,0	0/0:18,0:18:54.19:0,54,1939	0/0:28,0:28:84.29:0,84,3046	0/0:27,0:27:81.28:0,81,3021	0/0:28,0:28:81.23:0,81,2801	0/0:22,0:22:66.23:0,66,2392	0/0:16,0:16:48.16:0,48,1629	0/0:21,0:21:63.22:0,63,2358	0/0:20,0:20:57:0,57,1827	1/1:0,13:13:36.12:831,36,0	1/1:0,18:18:48.03:1107,48,0	1/1:0,13:13:15.05:370,15,0	0/0:24,0:24:69.24:0,69,2351	0/0:29,0:29:87.30:0,87,3166	0/0:21,0:21:63.22:0,63,2280	0/0:16,0:16:48.16:0,48,1759
chr10	46865570	.	TA	T	5464.95	PASS	AB=0.900;AC=35;AF=0.625;AN=56;BaseQRankSum=7.669;DP=598;FS=5.513;HRun=13;HaplotypeScore=68.6968;InbreedingCoeff=0.8363;MQ=63.90;MQ0=0;MQRankSum=0.061;QD=13.07;ReadPosRankSum=2.213;VQSLOD=5.2937;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,1:35:55.99:0,56,663	1/1:1,7:8:20.87:152,21,0	0/0:9,0:7:7.97:0,8,48	0/0:15,0:12:5.51:0,6,125	1/1:13,9:22:2.38:173,2,0	0/0:18,1:22:22.99:0,23,367	0/0:11,0:12:20.21:0,20,223	1/1:10,18:28:15.45:277,15,0	0/0:20,1:21:23.13:0,23,372	1/1:5,18:23:26.48:324,26,0	1/1:5,15:20:44.71:328,45,0	0/0:21,2:23:10.29:0,10,413	0/0:20,1:21:21.05:0,21,328	1/1:10,14:24:3.54:190,4,0	1/1:4,22:26:57.91:433,58,0	1/1:6,14:22:15.07:228,15,0	1/1:7,25:32:45.32:494,45,0	1/1:2,28:30:83.52:613,84,0	1/1:5,16:21:47.69:350,48,0	1/1:8,15:24:43.69:312,44,0	1/1:5,8:13:23.80:175,24,0	0/0:8,0:8:9.01:0,9,88	0/0:12,1:13:5.13:0,5,212	0/1:16,2:18:1.47:1,0,316	1/1:7,21:29:31.26:355,31,0	1/1:9,19:31:24.56:316,25,0	1/1:2,23:27:48.23:446,48,0	1/1:3,17:20:18.50:299,19,0
chr10	46866528	.	C	CTT	10613.74	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-14.876;DP=608;FS=12.224;HRun=3;HaplotypeScore=70.6299;InbreedingCoeff=0.9966;MQ=83.94;MQ0=2;MQRankSum=-5.788;QD=45.95;ReadPosRankSum=0.093;VQSLOD=3.2682;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,32:33:90.20:1611,90,0	0/0:12,0:12:27.08:0,27,364	0/0:21,0:21:54.16:0,54,724	0/0:17,0:17:39.12:0,39,520	0/0:11,0:11:27.08:0,27,361	1/1:1,18:19:54.19:990,54,0	1/1:1,37:40:99:1926,105,0	0/0:25,0:25:69.22:0,69,950	1/1:1,21:22:51.17:934,51,0	0/0:22,0:22:57.18:0,57,782	0/0:9,0:9:27.09:0,27,377	1/1:1,36:39:90.31:1636,90,0	1/1:1,23:23:57.20:1045,57,0	0/0:26,0:26:75.23:0,75,1031	0/0:22,0:22:63.21:0,63,882	0/0:22,0:22:63.21:0,63,882	0/0:34,0:34:99:0,99,1385	0/0:32,0:32:87.29:0,87,1218	0/0:13,0:13:36.11:0,36,489	0/0:7,0:7:15:0,15,210	0/0:41,0:41:99:0,120,1669	1/1:1,10:11:27.09:495,27,0	1/1:0,12:12:33.11:601,33,0	1/1:2,28:30:75.26:1375,75,0	0/0:18,0:18:48.11:0,48,619	0/0:21,0:21:57.19:0,57,797	0/0:15,0:15:45.15:0,45,630	0/0:9,0:9:27.09:0,27,377
chr10	46869370	.	GCACTGCC	G	12171.84	PASS	AB=0.683;AC=20;AF=0.357;AN=56;BaseQRankSum=10.623;DP=713;FS=6.544;HRun=0;HaplotypeScore=196.6918;InbreedingCoeff=0.1958;MQ=45.68;MQ0=12;MQRankSum=-12.782;QD=28.78;ReadPosRankSum=-1.343;VQSLOD=3.5152;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:13,20:33:99:1367,0,186	1/1:2,7:9:14.17:386,14,0	0/0:22,0:6:18.02:0,18,475	0/0:13,0:3:9.03:0,9,312	0/0:7,0:7:21.07:0,21,778	0/1:14,25:39:99:1389,0,368	0/1:26,27:53:99:1213,0,957	0/0:18,0:18:48.16:0,48,1513	0/1:27,4:31:99:717,0,419	0/0:16,0:14:42.14:0,42,1557	0/0:6,0:6:18.06:0,18,717	0/1:15,35:50:99:2299,0,396	0/1:22,4:28:99:562,0,229	0/0:39,0:38:99:0,114,4326	0/1:32,2:34:99:892,0,170	0/0:39,0:39:99:0,114,4285	0/0:36,0:36:99:0,105,3956	0/0:42,0:42:99:0,123,4547	1/1:8,11:12:33.11:821,33,0	1/1:2,4:6:6.02:156,6,0	0/1:15,35:50:57.31:354,0,57	0/1:3,12:15:11.78:325,0,12	0/1:1,9:10:17.32:176,0,17	1/1:28,1:29:15.91:271,16,0	0/0:18,0:18:48.16:0,48,1870	0/0:23,0:23:63.21:0,63,2261	1/1:2,15:17:48.16:1246,48,0	0/0:11,0:11:30.10:0,30,1140
chr10	46869384	.	G	GCTCTGCACCTGT	12238.59	PASS	AB=0.867;AC=18;AF=0.321;AN=56;BaseQRankSum=6.691;DP=724;FS=12.244;HRun=0;HaplotypeScore=272.4972;InbreedingCoeff=0.0007;MQ=50.80;MQ0=4;MQRankSum=-11.882;QD=27.88;ReadPosRankSum=-1.700;VQSLOD=2.5718;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:37,0:37:87.97:1573,0,88	0/1:7,0:7:31.63:329,0,32	0/0:23,0:13:29.26:0,29,908	0/0:14,0:9:24.01:0,24,577	0/0:9,0:9:24.06:0,24,744	0/1:40,0:39:99:1351,0,334	0/1:51,0:51:99:1740,0,143	0/0:12,0:12:27.08:0,27,786	0/1:13,13:33:99:169,0,318	0/0:13,0:11:25.89:0,26,795	0/0:6,0:6:15.05:0,15,545	0/1:53,1:54:99:2533,0,571	0/1:15,17:36:99:179,0,389	0/0:44,0:43:99:0,126,4125	0/1:12,15:34:99:590,0,142	0/0:40,0:40:99:0,108,3520	0/0:38,0:38:99:0,108,3127	0/0:38,0:38:99:0,105,3396	0/1:16,0:13:86.21:789,0,86	1/1:6,0:6:12.01:243,12,0	0/1:44,0:44:23.87:713,0,24	1/1:17,0:17:16.28:422,16,0	1/1:11,0:11:12.56:226,13,0	0/1:8,16:35:50.81:147,0,51	0/0:16,0:16:36.11:0,36,1152	0/0:21,0:21:60.18:0,60,1710	0/1:18,0:18:53.47:1234,0,53	0/0:11,0:11:30.08:0,30,938
chr10	46871427	.	TCTGATTTTCAGGCCACCTCCCCGGCCCAGTCACATAGCTA	T	14437.73	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=11.448;DP=524;FS=0.557;HRun=0;HaplotypeScore=502.0552;InbreedingCoeff=0.8203;MQ=81.33;MQ0=0;MQRankSum=-10.216;QD=69.08;ReadPosRankSum=6.464;VQSLOD=1.5104;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:16,4:20:5.76:570,6,0	1/1:4,1:5:3.01:311,3,0	0/0:20,0:20:57.20:0,57,3442	0/0:16,0:16:38.74:0,39,2389	0/0:19,0:19:57.18:0,57,6735	1/1:13,5:18:12.04:1246,12,0	1/1:15,0:15:3.01:43,3,0	0/0:29,0:29:84.29:0,84,6907	1/1:9,11:20:21.07:2177,21,0	0/0:19,0:19:54.19:0,54,5975	0/0:9,0:9:24.08:0,24,2342	1/1:8,10:18:27.09:2803,27,0	1/1:9,7:16:21.07:2172,21,0	0/0:29,0:29:87.30:0,87,13580	1/1:18,8:26:15.05:1557,15,0	0/0:32,0:32:87.30:0,87,13867	0/0:34,0:33:99:0,102,15320	0/0:31,0:31:93.32:0,93,13545	1/1:11,6:17:14.98:694,15,0	1/1:2,1:3:3.01:311,3,0	0/0:18,0:18:0.47:0,0,2	1/1:8,0:8:3:26,3,0	1/1:5,3:8:6.02:623,6,0	1/1:13,6:19:5.49:347,5,0	0/0:21,0:21:63.22:0,63,9576	0/0:33,0:33:96.33:0,96,13398	1/1:9,7:16:15.05:1557,15,0	0/0:5,0:5:15.05:0,15,2411
chr10	46873496	.	C	CT	1995.66	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-6.522;DP=668;FS=5.235;HRun=9;HaplotypeScore=68.3197;InbreedingCoeff=0.9911;MQ=71.19;MQ0=0;MQRankSum=-1.131;QD=21.69;ReadPosRankSum=-0.073;VQSLOD=4.3972;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,129,1114	0/0:16,0:16:41.91:0,42,356	0/0:10,0:11:15.79:0,16,134	0/0:14,0:14:23.99:0,24,208	0/0:23,0:23:56.98:0,57,495	0/0:19,0:19:41.96:0,42,364	0/0:28,0:28:65.98:0,66,573	0/0:36,0:36:92.96:0,93,807	0/0:18,0:18:34.72:0,35,369	0/0:27,0:27:59.96:0,60,519	0/0:19,0:19:50.99:0,51,443	0/0:26,0:26:68.97:0,69,599	0/0:29,0:29:83.94:0,84,721	0/0:24,0:24:65.99:0,66,573	0/0:28,0:28:68.94:0,69,595	0/0:35,0:35:95.97:0,96,833	0/0:20,0:21:62:0,62,521	0/0:27,0:27:74.98:0,75,651	1/1:7,14:22:48.02:511,48,0	1/1:1,16:17:39.10:429,39,0	1/1:6,23:30:39.96:652,40,0	0/0:31,0:31:77.96:0,78,677	0/0:20,0:20:53.99:0,54,469	0/0:39,0:39:92.96:0,93,807	0/0:17,0:17:44.99:0,45,390	0/0:18,0:18:50.98:0,51,440	1/1:1,22:23:51.14:564,51,0	0/0:5,0:5:15:0,15,130
chr10	46873906	.	T	TGG	8161.99	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-12.116;DP=349;FS=1.881;HRun=4;HaplotypeScore=36.5572;InbreedingCoeff=0.9607;MQ=79.76;MQ0=0;MQRankSum=0.599;QD=41.86;ReadPosRankSum=2.073;VQSLOD=3.8081;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,18:21:42.14:756,42,0	1/1:0,3:4:9.03:162,9,0	0/0:9,0:9:21.07:0,21,274	0/0:7,0:7:15.01:0,15,180	0/0:11,0:11:30.10:0,30,400	1/1:0,7:7:21.07:378,21,0	1/1:4,18:21:42.14:755,42,0	0/0:14,0:14:27.08:0,27,347	1/1:0,7:7:21.07:378,21,0	0/0:16,0:16:45.15:0,45,595	0/0:5,0:5:15.05:0,15,200	1/1:3,16:19:39.60:703,40,0	1/1:1,9:10:21.07:378,21,0	0/0:15,0:15:42.14:0,42,560	1/1:0,10:10:30.10:540,30,0	0/0:7,0:7:18.06:0,18,240	0/0:28,0:28:75.25:0,75,1001	0/0:15,0:15:39.13:0,39,519	1/1:0,9:9:24.08:421,24,0	1/1:1,3:4:12:180,12,0	1/1:2,46:48:99:2052,114,0	1/1:1,3:4:9.03:161,9,0	1/1:1,9:10:21.07:378,21,0	1/1:0,14:15:36.12:649,36,0	0/0:11,0:11:33.11:0,33,440	0/0:13,0:13:36.12:0,36,480	1/1:0,5:5:15.05:270,15,0	0/0:3,0:3:9.03:0,9,120
chr10	46881860	.	A	AG	964.89	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-6.584;DP=588;FS=1.503;HRun=7;HaplotypeScore=60.8190;InbreedingCoeff=0.9961;MQ=86.05;MQ0=0;MQRankSum=-2.569;QD=26.80;ReadPosRankSum=2.649;VQSLOD=4.4642;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:69.09:0,69,661	1/1:0,10:10:27.08:326,27,0	0/0:22,0:23:47.48:0,47,413	0/0:20,0:19:34.45:0,34,300	0/0:22,0:22:44.50:0,45,400	0/0:22,0:22:57.09:0,57,547	0/0:27,0:27:69.09:0,69,659	0/0:32,0:32:75.07:0,75,709	0/0:15,0:15:45.07:0,45,434	0/0:16,0:16:39.06:0,39,375	0/0:14,0:14:36.04:0,36,341	0/0:20,0:20:51.05:0,51,484	0/0:26,0:26:69.08:0,69,653	0/0:28,0:28:78.12:0,78,753	1/1:2,24:26:63.19:760,63,0	0/0:23,0:23:51.07:0,51,492	0/0:36,0:36:96.12:0,96,919	0/0:18,0:18:48.08:0,48,464	0/0:21,0:21:53.19:0,53,486	0/0:13,0:13:30.04:0,30,288	0/0:36,0:36:99:0,105,1013	0/0:13,0:13:32.41:0,32,296	0/0:17,0:17:42.06:0,42,401	0/0:31,0:31:84.07:0,84,795	0/0:11,0:10:27.03:0,27,257	0/0:14,0:14:36.05:0,36,347	0/0:18,0:18:51.08:0,51,492	0/0:7,0:7:21.03:0,21,203
chr10	46882582	.	TGG	T	28666.15	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-1.884;DP=701;FS=0.000;HRun=2;HaplotypeScore=88.9180;InbreedingCoeff=0.9987;MQ=89.67;MQ0=0;MQRankSum=-11.859;QD=44.37;ReadPosRankSum=7.355;VQSLOD=4.3908;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,45:45:99:1956,120,0	1/1:0,12:12:36.12:587,36,0	0/0:26,0:26:74.57:0,75,1395	0/0:29,0:28:71.35:0,71,1416	1/1:0,28:28:75.26:1223,75,0	1/1:0,22:22:57.19:929,57,0	1/1:0,29:29:72.25:1169,72,0	1/1:0,30:30:90.21:1290,90,0	1/1:0,25:25:66.23:1076,66,0	1/1:0,25:25:72.25:1175,72,0	1/1:0,19:19:54.18:880,54,0	1/1:0,30:30:87.30:1419,87,0	1/1:0,31:31:84.29:1370,84,0	1/1:0,35:35:93.32:1515,93,0	1/1:0,38:38:99:1712,105,0	1/1:0,36:36:99:1663,102,0	1/1:0,30:30:84.29:1369,84,0	1/1:0,12:12:33.11:538,33,0	1/1:0,16:16:45.15:726,45,0	1/1:0,15:15:45.15:734,45,0	1/1:0,34:34:78.27:1272,78,0	1/1:0,14:14:39.13:636,39,0	1/1:0,15:15:45.15:734,45,0	1/1:0,26:26:72.25:1174,72,0	1/1:0,19:19:48.16:783,48,0	1/1:0,32:32:96.33:1564,96,0	1/1:0,19:19:48.16:782,48,0	1/1:0,9:9:24.08:391,24,0
chr10	46885173	.	GCT	G	7680.86	PASS	AB=1.000;AC=52;AF=0.963;AN=54;BaseQRankSum=-3.675;DP=234;FS=10.675;HRun=0;HaplotypeScore=75.1834;InbreedingCoeff=0.1607;MQ=56.97;MQ0=2;MQRankSum=-1.926;QD=32.82;ReadPosRankSum=3.293;VQSLOD=6.8774;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,14:14:39.02:515,39,0	1/1:0,2:2:6.02:90,6,0	0/1:11,0:6:15.72:16,0,21	0/1:13,0:5:1.53:2,0,2	1/1:5,12:17:36.12:509,36,0	1/1:0,10:10:24.08:352,24,0	1/1:0,8:8:21.07:298,21,0	1/1:0,14:14:39.02:505,39,0	1/1:0,2:2:6.02:87,6,0	1/1:0,4:4:12.04:177,12,0	1/1:0,8:8:21.07:301,21,0	1/1:1,7:8:21.07:306,21,0	1/1:0,6:6:18.06:263,18,0	1/1:0,12:12:33.11:479,33,0	1/1:0,6:6:18.02:241,18,0	1/1:0,13:13:36.12:529,36,0	1/1:0,15:15:33.11:481,33,0	1/1:0,10:10:30.10:442,30,0	1/1:1,6:6:17.97:232,18,0	1/1:0,4:4:12.04:170,12,0	1/1:0,8:8:15.05:221,15,0	1/1:0,4:4:12.04:172,12,0	1/1:0,5:5:12.04:175,12,0	1/1:2,9:10:29.91:359,30,0	1/1:0,2:2:6.02:87,6,0	1/1:2,7:9:24.04:323,24,0	1/1:0,11:11:24.08:348,24,0	./.
chr10	46885571	.	AC	A	24685.22	PASS	AB=0.935;AC=53;AF=0.946;AN=56;BaseQRankSum=7.339;DP=695;FS=0.000;HRun=1;HaplotypeScore=210.8447;InbreedingCoeff=0.6882;MQ=54.96;MQ0=0;MQRankSum=-10.145;QD=37.01;ReadPosRankSum=4.702;VQSLOD=4.1134;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,45:52:99:1865,125,0	1/1:1,10:11:30.09:402,30,0	0/0:28,0:24:69.15:0,69,979	0/1:26,0:28:10.01:10,0,820	1/1:0,22:19:57.19:794,57,0	1/1:2,17:19:57.13:741,57,0	1/1:2,28:30:90.29:1241,90,0	1/1:1,25:26:78.26:1071,78,0	1/1:0,25:25:75.25:1046,75,0	1/1:4,28:32:87.27:1178,87,0	1/1:0,17:17:51.13:686,51,0	1/1:1,30:31:93.30:1285,93,0	1/1:0,25:25:72.24:1010,72,0	1/1:0,33:33:96.32:1344,96,0	1/1:3,28:31:93.26:1265,93,0	1/1:0,29:29:84.28:1177,84,0	1/1:1,28:29:78.22:1065,78,0	1/1:4,19:23:66.07:834,66,0	1/1:2,15:17:51.12:675,51,0	1/1:1,16:17:51.13:689,51,0	1/1:5,13:18:36.02:443,36,0	1/1:2,21:22:60.16:813,60,0	1/1:0,13:13:39.13:544,39,0	1/1:5,22:27:54.88:847,55,0	1/1:3,14:17:51.17:706,51,0	1/1:0,29:29:87.29:1212,87,0	1/1:1,28:29:87.28:1198,87,0	1/1:0,13:13:39.13:545,39,0
chr10	46885588	.	GACTC	G	29208.32	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=8.480;DP=721;FS=15.199;HRun=0;HaplotypeScore=226.5619;InbreedingCoeff=0.9990;MQ=67.95;MQ0=5;MQRankSum=-10.977;QD=44.12;ReadPosRankSum=7.523;VQSLOD=3.3405;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,46:52:96.31:1733,96,0	1/1:0,11:10:27.09:503,27,0	0/0:24,0:24:72.20:0,72,1679	0/0:34,0:33:70.07:0,70,1620	1/1:2,24:23:57.19:1014,57,0	1/1:1,15:16:45.15:838,45,0	1/1:3,24:27:66.23:1227,66,0	1/1:4,22:26:72.24:1279,72,0	1/1:3,22:25:66.21:1197,66,0	1/1:2,35:37:99:1804,102,0	1/1:2,20:22:63.21:1102,63,0	1/1:2,34:36:93.28:1693,93,0	1/1:8,15:23:57.18:1030,57,0	1/1:3,25:27:78.27:1449,78,0	1/1:2,28:29:78.25:1421,78,0	1/1:7,20:27:69.23:1231,69,0	1/1:6,20:25:57.19:1042,57,0	1/1:3,23:26:60.20:1084,60,0	1/1:4,11:15:33.11:604,33,0	1/1:5,14:19:42.13:751,42,0	1/1:4,21:25:36.12:591,36,0	1/1:0,29:27:72.24:1276,72,0	1/1:1,13:14:36.12:661,36,0	1/1:5,27:31:60.16:1074,60,0	1/1:1,12:13:36.12:652,36,0	1/1:1,31:32:93.32:1728,93,0	1/1:1,30:31:90.09:1641,90,0	1/1:2,12:14:33.09:582,33,0
chr10	46886044	.	TG	T	7579.34	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=0.084;DP=620;FS=1.400;HRun=4;HaplotypeScore=72.5744;InbreedingCoeff=0.9959;MQ=77.70;MQ0=0;MQRankSum=0.423;QD=32.12;ReadPosRankSum=1.850;VQSLOD=5.4911;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,126,1726	0/0:7,0:7:21.07:0,21,294	0/0:23,0:23:57.18:0,57,770	0/0:21,0:20:53.63:0,54,751	1/1:2,15:17:42.13:503,42,0	0/0:21,0:21:60.17:0,60,804	0/0:26,0:26:75.25:0,75,1048	1/1:1,23:24:69.21:828,69,0	0/0:22,0:22:60.20:0,60,839	1/1:1,16:17:42.13:504,42,0	1/1:0,13:13:33.10:396,33,0	0/0:26,0:26:78.26:0,78,1092	0/0:20,0:20:57.19:0,57,795	1/1:1,34:35:81.25:972,81,0	0/0:24,0:24:66.17:0,66,886	1/1:0,27:27:78.24:936,78,0	1/1:0,37:37:99:1295,108,0	1/1:0,19:19:54.17:648,54,0	0/0:23,0:23:63.17:0,63,824	0/0:16,0:16:42.14:0,42,588	0/0:36,0:36:96.29:0,96,1309	0/0:17,0:17:48.16:0,48,669	0/0:7,0:7:15.05:0,15,210	0/0:19,0:19:51.17:0,51,711	1/1:0,18:18:51.16:612,51,0	1/1:3,20:23:57.15:669,57,0	0/0:31,0:30:93.31:0,93,1301	1/1:0,6:6:18.06:216,18,0
chr10	46886223	.	ATT	A	2868.67	PASS	AB=0.749;AC=45;AF=0.804;AN=56;BaseQRankSum=1.412;DP=475;FS=18.410;HRun=16;HaplotypeScore=74.7029;InbreedingCoeff=0.5707;MQ=57.64;MQ0=23;MQRankSum=0.532;QD=7.43;ReadPosRankSum=5.155;VQSLOD=-0.6235;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,21:29:41.49:337,41,0	0/0:8,0:8:15.05:0,15,196	0/0:35,0:10:15.92:0,16,158	0/0:34,0:8:12:0,12,113	1/1:7,1:18:22.95:110,23,0	1/1:3,7:12:20.40:148,20,0	1/1:4,14:19:26.87:268,27,0	0/1:13,0:16:2.37:64,0,2	1/1:5,5:10:8.79:75,9,0	1/1:6,1:15:19.02:82,19,0	1/1:4,0:14:21.85:94,22,0	1/1:8,4:11:5.32:39,5,0	1/1:3,7:9:5.93:50,6,0	1/1:3,0:9:16.27:69,16,0	0/0:11,0:11:27.05:0,27,323	1/1:6,0:7:5.37:23,5,0	1/1:10,0:26:49.59:207,50,0	1/1:8,0:21:3.71:127,4,0	1/1:7,6:12:11.62:81,12,0	0/1:9,6:16:2.91:145,0,3	1/1:4,13:19:10.44:193,10,0	0/1:8,2:10:35.23:35,0,54	1/1:3,8:11:11.10:141,11,0	1/1:8,12:19:26.76:267,27,0	1/1:8,0:18:28.53:121,29,0	1/1:10,0:25:40.05:169,40,0	1/1:5,9:15:20.48:162,20,0	1/1:2,0:4:5.44:24,5,0
chr10	46886310	.	G	GC	1531.23	PASS	AB=1.000;AC=16;AF=0.286;AN=56;BaseQRankSum=-0.593;DP=559;FS=3.805;HRun=8;HaplotypeScore=95.3117;InbreedingCoeff=0.7633;MQ=63.60;MQ0=27;MQRankSum=3.777;QD=8.02;ReadPosRankSum=-1.073;VQSLOD=1.6326;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:35:75.02:0,75,682	1/1:13,0:13:32.40:200,32,0	0/1:53,0:11:13.13:13,0,48	0/0:39,0:13:12.65:0,13,123	0/0:17,1:18:14.28:0,14,212	1/1:19,0:19:6.57:52,7,0	0/1:25,0:25:6.83:7,0,183	0/0:15,0:14:7.28:0,7,121	0/0:11,0:10:24:0,24,216	0/0:18,0:18:41.61:0,42,264	0/0:16,0:16:32.12:0,32,195	0/0:12,0:12:11.02:0,11,212	0/0:15,1:16:5.71:0,6,289	0/0:12,0:12:23.46:0,23,134	1/1:20,0:20:53.03:327,53,0	0/0:14,0:14:30.19:0,30,152	0/0:31,0:30:62.87:0,63,301	0/0:19,0:19:34.70:0,35,169	1/1:5,10:14:7.83:276,8,0	1/1:3,8:12:17.92:187,18,0	1/1:10,9:18:34.98:302,35,0	0/0:13,0:12:23.72:0,24,218	0/0:16,0:16:45.02:0,45,408	0/0:19,0:17:32.96:0,33,297	0/0:27,0:27:40.74:0,41,255	0/0:25,0:24:30:0,30,222	1/1:4,9:14:35.84:359,36,0	0/0:9,0:8:13.72:0,14,72
chr10	46886318	.	CT	C	623.98	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=2.602;DP=551;FS=2.240;HRun=10;HaplotypeScore=96.4141;InbreedingCoeff=0.9752;MQ=69.56;MQ0=18;MQRankSum=0.797;QD=20.13;ReadPosRankSum=0.412;VQSLOD=4.0299;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:34:96.12:0,96,986	1/1:3,10:13:35.08:278,35,0	0/0:45,0:14:13.79:0,14,140	0/0:28,0:14:22.04:0,22,197	0/0:22,0:22:49.45:0,49,313	0/0:2,0:20:42.93:0,43,239	0/0:16,0:27:53.73:0,54,335	0/0:16,0:15:40.62:0,41,233	0/0:13,0:12:29.81:0,30,289	0/0:18,0:18:41.04:0,41,267	0/0:16,0:16:29.26:0,29,189	0/0:15,0:15:35.70:0,36,329	0/0:16,0:16:35.99:0,36,354	0/0:13,0:13:26.31:0,26,171	1/1:0,18:18:53.99:467,54,0	0/0:13,0:13:31.96:0,32,187	0/0:32,0:31:81.31:0,81,474	0/0:20,0:20:37.80:0,38,216	0/0:14,0:13:32.07:0,32,221	0/0:12,0:12:26.53:0,27,184	0/0:19,0:18:41.28:0,41,307	0/0:15,0:14:39.02:0,39,388	0/0:16,0:16:45.11:0,45,487	0/0:20,0:18:23.72:0,24,430	0/0:25,0:25:63.96:0,64,365	0/0:24,0:23:52.35:0,52,312	0/0:16,0:16:41.73:0,42,315	0/0:10,0:9:14.51:0,15,82
chr10	46886328	.	T	TA	6003.33	PASS	AB=1.000;AC=24;AF=0.429;AN=56;BaseQRankSum=-7.431;DP=560;FS=2.547;HRun=3;HaplotypeScore=80.5843;InbreedingCoeff=0.8450;MQ=74.27;MQ0=14;MQRankSum=0.218;QD=23.92;ReadPosRankSum=2.885;VQSLOD=4.1915;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:38:99:0,105,1201	0/0:13,0:13:35.01:0,35,199	0/0:43,0:15:28.74:0,29,279	0/0:24,0:15:10.76:0,11,172	1/1:11,8:19:35.04:551,35,0	0/1:22,0:22:42.52:43,0,49	0/1:21,0:21:32.84:41,0,33	1/1:2,18:20:55.63:616,56,0	0/0:12,0:11:33.09:0,33,381	1/1:4,15:19:45.08:518,45,0	1/1:1,10:11:27:329,27,0	0/0:15,0:15:36.08:0,36,395	0/0:13,0:13:30.08:0,30,348	1/1:2,11:13:21.07:276,21,0	0/0:23,0:23:64.61:0,65,404	1/1:1,12:14:30.07:378,30,0	1/1:9,20:30:87.59:1058,88,0	1/1:1,22:23:36.12:473,36,0	0/0:18,0:17:43.60:0,44,345	0/0:10,0:10:24.40:0,24,191	0/0:19,0:18:33.19:0,33,284	0/0:17,0:18:38.46:0,38,415	0/0:20,0:20:56.98:0,57,580	0/0:22,0:21:60.10:0,60,661	1/1:2,21:24:63.18:806,63,0	1/1:3,21:24:60.14:716,60,0	0/0:19,0:18:30.92:0,31,253	1/1:3,8:10:15.05:197,15,0
chr10	46887197	.	TG	T	6405.47	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=18.618;DP=745;FS=1.210;HRun=1;HaplotypeScore=237.6601;InbreedingCoeff=0.9999;MQ=80.49;MQ0=0;MQRankSum=-17.397;QD=23.29;ReadPosRankSum=1.051;VQSLOD=4.4835;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,129,2014	0/0:11,0:11:33.10:0,33,504	0/0:25,0:25:72.24:0,72,1134	0/0:28,0:28:81.23:0,81,1242	1/1:2,33:35:99:757,101,0	0/0:28,0:28:84.29:0,84,1327	0/0:15,0:15:42.14:0,42,669	1/1:1,22:23:65.79:522,66,0	0/0:29,0:29:87.30:0,87,1378	1/1:0,32:32:95.35:801,95,0	1/1:0,22:22:65.55:487,66,0	0/0:26,0:26:75.26:0,75,1195	0/0:27,0:27:81.28:0,81,1290	1/1:0,21:21:62.72:492,63,0	0/0:40,0:40:99:0,120,1891	1/1:2,36:38:99:915,114,0	1/1:1,25:26:77.66:607,78,0	1/1:3,10:13:31.16:242,31,0	0/0:28,0:28:77.99:0,78,1219	0/0:27,0:27:78.27:0,78,1242	0/0:36,0:36:99:0,105,1676	0/0:22,0:22:66.21:0,66,1033	0/0:21,0:21:63.21:0,63,1002	0/0:32,0:32:93.28:0,93,1428	1/1:2,21:23:68.67:536,69,0	1/1:0,29:29:86.83:734,87,0	0/0:31,0:30:93.32:0,93,1482	1/1:1,12:13:38.84:313,39,0
chr10	46887199	.	ATG	A	7079.29	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=16.017;DP=758;FS=0.883;HRun=0;HaplotypeScore=253.0470;InbreedingCoeff=0.9801;MQ=80.82;MQ0=0;MQRankSum=-15.937;QD=25.19;ReadPosRankSum=1.045;VQSLOD=5.0161;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,126,1308	0/0:11,0:11:33.07:0,33,338	0/0:28,0:28:72.25:0,72,1310	0/0:28,0:28:77.87:0,78,1356	1/1:2,33:35:98.93:861,99,0	0/0:27,0:27:81.16:0,81,824	0/0:15,0:15:42.09:0,42,430	1/1:4,22:26:7.34:510,7,0	0/0:29,0:29:58.67:0,59,800	1/1:1,31:33:80.79:909,81,0	1/1:0,22:22:65.96:572,66,0	0/0:26,0:26:75.15:0,75,762	0/0:27,0:27:81.17:0,81,851	1/1:1,21:22:48.87:556,49,0	0/0:39,0:39:99:0,117,1156	1/1:1,36:37:94.75:989,95,0	1/1:0,25:25:75.02:682,75,0	1/1:2,10:12:31.58:282,32,0	0/0:29,0:29:70.70:0,71,681	0/0:27,0:27:53.20:0,53,740	0/0:38,0:38:99:0,108,1070	0/0:22,0:22:63.05:0,63,640	0/0:24,0:24:62.86:0,63,635	0/0:32,0:32:85.91:0,86,867	1/1:2,21:23:69.01:625,69,0	1/1:3,28:31:74.45:807,74,0	0/0:31,0:30:69.24:0,69,912	1/1:3,12:15:9.16:286,9,0
chr10	46893199	.	TTTCCTTCCTTCCTTCC	T	1440.60	PASS	AB=0.900;AC=14;AF=0.269;AN=52;BaseQRankSum=2.776;DP=597;FS=1.328;HRun=0;HaplotypeScore=245.1834;InbreedingCoeff=0.5100;MQ=67.65;MQ0=6;MQRankSum=-2.488;QD=8.63;ReadPosRankSum=2.384;VQSLOD=2.6558;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:29,11:40:1.40:130,1,0	0/0:7,0:7:12.04:0,12,803	./.	./.	0/0:23,0:23:21.07:0,21,1347	1/1:24,2:26:3.01:47,3,0	0/1:23,0:23:39.19:39,0,94	0/0:33,0:30:0:0,0,0	1/1:17,4:21:12.04:519,12,0	0/0:25,0:25:15.05:0,15,868	0/0:16,0:16:12.04:0,12,810	0/1:21,7:27:99:549,0,125	1/1:11,3:14:3.01:130,3,0	0/0:27,0:29:24.08:0,24,1127	0/0:21,0:23:12.04:0,12,655	0/0:24,0:28:7.27:0,7,418	0/0:20,0:21:21.04:0,21,1066	0/0:26,0:27:28.34:0,28,1402	0/0:24,0:24:9.50:0,10,465	0/0:23,0:21:24.08:0,24,1506	0/0:17,0:16:6.47:0,6,106	1/1:9,0:9:6.02:113,6,0	1/1:6,0:6:3.01:61,3,0	0/0:19,7:26:1.25:0,1,3	0/0:9,0:13:18.06:0,18,1109	0/0:24,0:26:15.03:0,15,806	0/0:10,0:10:12.04:0,12,772	0/0:16,0:17:9.03:0,9,485
chr10	46893695	.	TGG	T	6495.53	PASS	AB=0.685;AC=34;AF=0.607;AN=56;BaseQRankSum=-11.645;DP=455;FS=4.815;HRun=10;HaplotypeScore=81.2450;InbreedingCoeff=0.6980;MQ=79.95;MQ0=0;MQRankSum=-1.427;QD=21.80;ReadPosRankSum=1.921;VQSLOD=4.3981;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,24:27:60.02:727,60,0	1/1:0,6:6:15.04:167,15,0	0/0:13,0:14:30.08:0,30,395	0/1:12,0:13:2.75:3,0,92	0/1:5,1:14:10.48:10,0,46	1/1:0,11:11:33.09:368,33,0	1/1:5,25:30:65.84:713,66,0	0/0:3,0:17:29.94:0,30,103	1/1:1,7:8:21.05:234,21,0	0/0:3,0:9:12.48:0,12,43	0/1:4,1:7:9.23:25,0,9	1/1:3,15:18:45.11:501,45,0	1/1:4,18:22:50.86:568,51,0	0/1:4,2:20:28.41:28,0,73	1/1:3,14:17:33.08:368,33,0	0/0:0,0:14:34.93:0,35,120	0/0:8,1:42:52.60:0,53,270	0/0:7,1:28:28.48:0,28,253	1/1:2,11:14:26.99:345,27,0	1/1:2,4:6:9.01:100,9,0	1/1:2,37:39:90.23:1003,90,0	1/1:2,10:12:30.07:334,30,0	1/1:2,6:8:21.05:232,21,0	1/1:1,17:18:48.13:535,48,0	0/0:6,0:14:19.84:0,20,68	0/0:5,0:17:27.45:0,27,94	1/1:0,7:7:21.06:233,21,0	0/0:1,0:2:2.50:0,2,9
chr10	46893704	.	GGT	G	1730.41	PASS	AB=0.980;AC=21;AF=0.375;AN=56;BaseQRankSum=3.750;DP=466;FS=5.521;HRun=0;HaplotypeScore=100.4770;InbreedingCoeff=0.1319;MQ=83.05;MQ0=0;MQRankSum=-2.262;QD=6.63;ReadPosRankSum=6.413;VQSLOD=2.4040;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:29:27.37:209,0,27	0/1:8,0:8:21.31:75,0,21	0/0:16,0:16:35.16:0,35,440	0/0:17,0:16:28.67:0,29,238	0/0:14,0:14:23.38:0,23,174	1/1:12,0:12:6.35:83,6,0	1/1:28,0:28:3.76:176,4,0	0/0:22,0:22:61.81:0,62,443	1/1:8,0:8:16.51:72,17,0	0/0:9,0:9:23.49:0,23,155	0/1:7,0:7:2.50:2,0,58	1/1:16,1:17:19.63:181,20,0	1/1:19,1:20:23.47:214,23,0	0/0:18,0:18:20.91:0,21,223	0/1:17,1:18:31.81:94,0,32	0/0:15,0:15:43.50:0,44,242	0/0:40,0:40:80.98:0,81,536	0/0:25,0:24:54.75:0,55,418	0/1:15,0:15:49.42:85,0,49	0/1:6,0:6:28.92:29,0,43	0/1:42,0:42:32.09:233,0,32	0/1:12,0:12:14.39:121,0,14	0/1:8,2:10:24.09:126,0,24	0/1:20,0:20:23.61:131,0,24	0/0:10,0:10:24.70:0,25,137	0/0:14,0:14:37.88:0,38,240	0/1:9,0:9:23.03:80,0,23	0/0:4,0:4:8.89:0,9,65
chr10	46894204	.	T	TCAC	10020.42	PASS	AB=0.600;AC=29;AF=0.518;AN=56;BaseQRankSum=10.218;DP=778;FS=2.817;HRun=0;HaplotypeScore=234.6137;InbreedingCoeff=0.9155;MQ=68.50;MQ0=0;MQRankSum=-8.887;QD=25.37;ReadPosRankSum=2.130;VQSLOD=4.6683;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:30,4:35:43.68:762,44,0	0/1:4,7:12:1.85:471,0,2	0/0:34,0:32:73.66:0,74,1208	0/0:39,0:34:73.98:0,74,1214	0/0:18,0:18:1.38:0,1,554	1/1:15,2:18:36.97:575,37,0	1/1:27,4:31:38.82:888,39,0	0/0:44,0:44:99:0,119,2002	1/1:34,3:37:53.48:885,53,0	0/0:38,0:38:99:0,111,1655	0/0:18,0:18:45.11:0,45,615	1/1:35,5:40:39.94:991,40,0	1/1:27,3:30:56:937,56,0	0/0:54,0:54:99:0,115,1869	1/1:6,30:39:87.29:1782,87,0	0/0:45,0:45:98.49:0,98,1639	0/0:23,0:23:31.45:0,31,500	0/0:23,0:23:55.41:0,55,708	1/1:15,0:15:17.86:236,18,0	1/1:13,1:16:33.06:540,33,0	1/1:45,2:47:9.35:86,9,0	1/1:16,2:18:20.53:297,21,0	1/1:14,1:15:22.77:401,23,0	1/1:17,4:21:28.98:416,29,0	0/0:15,0:15:39.12:0,39,542	0/0:26,0:26:74.99:0,75,1115	1/1:19,2:21:45.14:752,45,0	0/0:6,0:6:18.06:0,18,260
chr10	46894218	.	A	ACCACATCACCAT	37181.10	PASS	AB=0.657;AC=39;AF=0.696;AN=56;BaseQRankSum=-3.772;DP=934;FS=34.410;HRun=0;HaplotypeScore=260.6905;InbreedingCoeff=-0.1019;MQ=64.52;MQ0=0;MQRankSum=-11.786;QD=43.54;ReadPosRankSum=6.895;VQSLOD=2.9851;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,20:48:48.16:2193,48,0	0/1:14,0:15:99:120,0,358	0/0:41,0:39:99:0,100,2030	0/0:39,0:34:95.90:0,96,2211	0/1:6,0:19:99:363,0,193	1/1:4,13:29:36.08:2063,36,0	1/1:7,19:44:61.38:2686,61,0	0/1:25,0:47:99:1566,0,965	1/1:6,23:42:51.17:2904,51,0	0/1:11,0:36:99:1576,0,322	0/1:5,0:18:99:520,0,186	1/1:9,23:51:44.21:3350,44,0	1/1:7,19:36:54.19:2841,54,0	0/1:21,0:59:99:2035,0,547	0/1:38,0:38:26.71:27,0,690	0/1:16,0:58:99:1883,0,454	0/1:8,0:26:99:781,0,101	0/1:6,0:23:99:735,0,262	1/1:11,4:24:60.19:1552,60,0	1/1:4,10:25:33.07:1557,33,0	1/1:17,13:55:12.91:483,13,0	1/1:4,8:27:15.05:862,15,0	1/1:1,10:18:24.08:1154,24,0	1/1:7,10:34:27.09:1230,27,0	0/1:8,0:19:99:637,0,169	0/1:10,0:33:99:1475,0,322	1/1:3,12:23:45.15:2409,45,0	0/1:2,0:7:77.44:176,0,77
chr10	46897127	.	G	GT	8607.11	PASS	AC=50;AF=1.000;AN=50;DP=219;FS=0.000;HRun=1;HaplotypeScore=135.0924;InbreedingCoeff=-0.0168;MQ=28.94;MQ0=0;QD=39.30;VQSLOD=4.4000;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,11:11:27.09:404,27,0	./.	./.	./.	1/1:0,9:8:15.01:199,15,0	1/1:0,12:12:36.12:539,36,0	1/1:1,16:17:42.10:603,42,0	1/1:0,9:9:27.09:404,27,0	1/1:0,8:8:24.08:359,24,0	1/1:1,10:11:33.11:494,33,0	1/1:1,6:7:15.01:199,15,0	1/1:0,10:10:30.10:449,30,0	1/1:0,6:6:15.05:224,15,0	1/1:0,11:11:33.07:469,33,0	1/1:0,9:9:21.07:314,21,0	1/1:1,11:12:33.11:494,33,0	1/1:0,6:6:18.06:269,18,0	1/1:2,5:6:15.05:225,15,0	1/1:0,10:10:30.10:449,30,0	1/1:0,10:10:24.08:359,24,0	1/1:1,5:6:6.02:90,6,0	1/1:0,9:9:27.09:403,27,0	1/1:0,5:5:12.04:179,12,0	1/1:0,3:3:6.02:90,6,0	1/1:0,8:8:24.08:359,24,0	1/1:0,11:11:33.11:494,33,0	1/1:0,10:10:30.10:449,30,0	1/1:0,2:2:6.02:90,6,0
chr10	46897464	.	T	TC	688.72	PASS	AB=0.932;AC=39;AF=0.750;AN=52;BaseQRankSum=-2.373;DP=299;FS=15.334;HRun=0;HaplotypeScore=66.3298;InbreedingCoeff=0.0566;MQ=48.21;MQ0=55;MQRankSum=0.067;QD=2.48;ReadPosRankSum=1.955;VQSLOD=1.0897;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:7,1:8:5.09:60,0,5	./.	0/1:70,0:12:26.87:27,0,91	0/1:81,0:13:3.51:4,0,97	1/1:6,0:3:1.91:13,2,0	1/1:2,0:2:1.95:17,2,0	1/1:5,1:5:2.49:75,2,0	0/1:12,0:8:7.70:22,0,8	1/1:3,0:3:8.87:56,9,0	0/1:6,0:5:4.15:24,0,4	1/1:1,0:1:0.47:1,0,0	0/1:3,4:5:8.04:54,0,8	1/1:5,0:3:8.58:48,9,0	1/1:3,0:3:0.72:2,1,0	1/1:3,0:2:5.70:30,6,0	1/1:10,0:9:0.33:60,0,0	0/0:15,0:13:2.58:0,3,8	0/1:9,0:9:4.93:43,0,5	1/1:15,0:8:12.55:78,13,0	1/1:5,0:3:3.43:31,3,0	1/1:5,0:3:3.23:31,3,0	1/1:3,0:2:5.90:37,6,0	./.	1/1:4,0:4:0.47:1,0,0	0/0:2,0:2:2.90:0,3,16	1/1:8,0:8:12.44:43,12,0	1/1:6,0:4:8.87:57,9,0	0/0:4,0:2:2.32:0,2,7
chr10	46897791	.	CAT	C	2637.29	PASS	AB=0.640;AC=31;AF=0.705;AN=44;BaseQRankSum=1.412;DP=189;FS=7.059;HRun=0;HaplotypeScore=47.8254;InbreedingCoeff=0.6797;MQ=73.79;MQ0=3;MQRankSum=-3.175;QD=22.35;ReadPosRankSum=1.405;VQSLOD=3.1644;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,3:6:6.02:76,6,0	0/0:2,0:2:6.02:0,6,97	0/0:13,0:10:11.12:0,11,144	0/0:31,0:16:16.82:0,17,181	1/1:3,1:4:3.01:37,3,0	1/1:3,3:6:9.03:114,9,0	./.	1/1:7,13:20:42.13:535,42,0	1/1:2,2:4:6.02:76,6,0	1/1:3,5:8:15.05:191,15,0	1/1:1,4:5:12.04:152,12,0	1/1:1,1:2:6.02:76,6,0	1/1:1,2:3:5.43:75,5,0	1/1:1,4:5:12.04:153,12,0	0/0:6,0:6:15.05:0,15,251	1/1:1,1:2:6.01:63,6,0	1/1:4,8:12:24.04:280,24,0	0/1:7,9:16:16.96:330,0,17	0/0:8,0:8:15.05:0,15,251	./.	./.	./.	./.	./.	1/1:2,5:7:18.06:228,18,0	1/1:2,3:5:9.03:114,9,0	0/0:6,0:6:18.02:0,18,270	1/1:3,10:13:24.08:300,24,0
chr10	46897815	.	TTA	T	2718.46	PASS	AC=24;AF=0.522;AN=46;BaseQRankSum=1.714;DP=182;FS=9.692;HRun=0;HaplotypeScore=51.9176;InbreedingCoeff=0.6911;MQ=67.75;MQ0=2;MQRankSum=-2.170;QD=23.64;ReadPosRankSum=-0.793;VQSLOD=3.2923;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:2,0:3:3:0,3,26	0/0:2,0:2:6.02:0,6,98	1/1:13,0:10:0.47:1,0,0	0/0:26,0:11:0:0,0,1	1/1:0,8:8:21.07:267,21,0	0/0:1,0:3:6:0,6,53	./.	1/1:9,20:29:60.15:721,60,0	0/0:4,0:4:5.60:0,6,36	1/1:1,13:14:39.11:481,39,0	1/1:2,1:3:3.01:38,3,0	0/0:1,0:2:3:0,3,27	0/0:1,0:2:3:0,3,27	1/1:1,3:4:9.03:114,9,0	0/0:8,0:8:24.08:0,24,399	1/1:0,3:3:6.02:76,6,0	1/1:1,10:11:27.09:343,27,0	1/1:3,9:12:24.08:305,24,0	0/0:8,0:8:18.06:0,18,300	0/0:3,0:3:9.03:0,9,138	./.	./.	./.	./.	1/1:0,9:9:24.08:305,24,0	1/1:0,4:4:12.04:153,12,0	0/0:6,0:6:6.49:0,6,101	1/1:3,2:5:6.02:76,6,0
chr10	46897860	.	TTATCTATC	T	2584.22	PASS	AB=0.986;AC=19;AF=0.352;AN=54;BaseQRankSum=0.665;DP=290;FS=1.055;HRun=0;HaplotypeScore=112.2803;InbreedingCoeff=0.4118;MQ=58.57;MQ0=5;MQRankSum=1.895;QD=17.11;ReadPosRankSum=-0.717;VQSLOD=2.8682;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:4.62:0,5,80	0/0:4,0:4:9.03:0,9,207	0/0:13,0:13:9.49:0,9,113	0/0:7,0:5:12.03:0,12,148	0/1:13,0:12:3.10:211,0,3	0/0:6,0:6:9.03:0,9,150	0/0:3,0:2:3.01:0,3,52	0/0:23,0:28:18.38:0,18,184	0/0:10,0:10:24.08:0,24,489	0/1:20,0:20:23.50:171,0,24	1/1:4,0:3:6.02:90,6,0	0/0:9,0:8:18.02:0,18,448	0/0:7,0:7:15.03:0,15,323	./.	0/0:14,0:14:29.65:0,30,775	1/1:11,0:11:2.08:322,2,0	0/1:16,0:16:21.72:126,0,22	0/1:14,0:13:26.51:102,0,27	1/1:11,1:11:15.05:299,15,0	1/1:8,0:8:24.07:481,24,0	0/0:6,0:6:0:0,0,0	0/0:3,0:2:6.02:0,6,170	0/0:6,0:4:9.03:0,9,211	0/0:4,0:4:3.01:0,3,36	1/1:19,1:19:30.91:433,31,0	0/1:12,1:13:8.09:299,0,8	1/1:0,11:11:5.90:142,6,0	1/1:9,0:9:5.92:80,6,0
chr10	46898476	.	CT	C	3813.38	PASS	AB=0.837;AC=24;AF=0.429;AN=56;BaseQRankSum=7.443;DP=486;FS=2.370;HRun=12;HaplotypeScore=55.3657;InbreedingCoeff=0.8278;MQ=63.44;MQ0=10;MQRankSum=-0.245;QD=15.89;ReadPosRankSum=1.260;VQSLOD=4.7411;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:33:78.09:0,78,773	0/0:11,0:11:27.05:0,27,274	0/1:11,1:9:14.26:14,0,41	0/0:3,0:3:5.82:0,6,33	1/1:6,19:25:52.74:394,53,0	0/0:14,1:15:29.93:0,30,277	0/0:13,0:13:21:0,21,202	1/1:6,25:31:71.61:548,72,0	0/0:14,0:14:17.04:0,17,188	1/1:4,16:20:50.78:393,51,0	1/1:1,19:21:49.83:377,50,0	0/0:18,0:17:38.97:0,39,363	0/0:15,0:15:29.80:0,30,284	1/1:5,14:19:37.90:284,38,0	0/0:31,0:30:66.09:0,66,659	1/1:0,14:14:29.89:232,30,0	1/1:2,14:14:32.87:255,33,0	1/1:7,12:15:21.07:241,21,0	0/0:20,0:20:20.91:0,21,312	0/0:17,0:16:36.06:0,36,360	0/0:14,0:14:33:0,33,310	0/1:2,1:3:17.22:17,0,24	0/0:10,0:11:12.01:0,12,115	0/0:8,0:8:9.02:0,9,91	1/1:1,15:16:35.86:279,36,0	1/1:3,22:24:35.28:453,35,0	0/0:23,0:23:45.04:0,45,439	1/1:3,14:17:41.83:325,42,0
chr10	46898937	.	AT	A	2278.86	PASS	AB=0.895;AC=19;AF=0.339;AN=56;BaseQRankSum=9.026;DP=560;FS=3.764;HRun=11;HaplotypeScore=59.4896;InbreedingCoeff=0.8662;MQ=69.71;MQ0=7;MQRankSum=0.048;QD=13.10;ReadPosRankSum=4.446;VQSLOD=3.7107;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,25:26:62.92:516,63,0	0/0:10,0:9:18.03:0,18,182	0/0:39,0:15:31.59:0,32,210	0/0:25,0:8:5.09:0,5,50	0/0:24,0:24:72.06:0,72,704	1/1:5,20:25:56.82:458,57,0	1/1:2,12:14:32.96:270,33,0	0/0:25,0:25:65.08:0,65,586	1/1:2,11:13:23.97:196,24,0	0/0:25,0:25:68.22:0,68,650	0/0:19,0:19:30.45:0,30,464	1/1:1,14:15:1.43:214,1,0	1/1:4,16:20:35.95:295,36,0	0/0:20,0:19:51.08:0,51,506	0/0:8,0:8:18.02:0,18,175	0/0:23,0:23:63.14:0,63,650	0/0:28,2:31:25.71:0,26,637	0/0:17,0:17:39.03:0,39,389	0/0:24,0:22:60.11:0,60,602	0/1:15,2:17:10.42:10,0,289	0/0:15,0:15:42.07:0,42,422	1/1:6,6:12:22.22:179,22,0	1/1:5,12:16:17.61:160,18,0	1/1:2,13:15:23.87:188,24,0	0/0:21,0:21:53.97:0,54,551	0/0:22,0:23:65.93:0,66,631	0/0:29,0:27:72.15:0,72,736	0/0:8,0:8:15.01:0,15,142
chr10	46899706	.	GT	G	4287.73	PASS	AB=0.760;AC=22;AF=0.393;AN=56;BaseQRankSum=7.229;DP=521;FS=1.616;HRun=10;HaplotypeScore=56.0483;InbreedingCoeff=0.8472;MQ=70.25;MQ0=6;MQRankSum=2.181;QD=18.02;ReadPosRankSum=1.750;VQSLOD=5.6215;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:74.99:0,75,797	0/0:5,0:5:12.03:0,12,133	0/0:24,0:13:13.69:0,14,136	0/1:21,1:12:10.10:10,0,58	1/1:4,16:20:47.95:417,48,0	0/0:21,0:21:57.15:0,57,623	0/0:14,0:15:41.92:0,42,429	1/1:7,19:26:53.96:468,54,0	0/0:10,0:10:24.06:0,24,265	1/1:3,24:27:68.95:594,69,0	1/1:0,22:22:65.99:572,66,0	0/0:14,0:14:39.11:0,39,431	0/0:20,0:19:49.11:0,49,561	1/1:0,21:21:53.99:469,54,0	0/0:16,0:16:39.11:0,39,431	1/1:1,11:12:32.99:287,33,0	1/1:2,19:21:47.99:417,48,0	1/1:6,20:26:14.63:357,15,0	0/0:23,0:24:68.95:0,69,727	0/0:16,0:19:53.64:0,54,540	0/0:16,0:16:42.11:0,42,457	0/0:11,0:11:30.08:0,30,328	0/0:20,1:20:32.72:0,33,508	0/0:9,0:9:24.05:0,24,257	1/1:2,9:11:20.99:182,21,0	1/1:4,17:21:20.77:403,21,0	0/0:25,0:25:66.18:0,66,729	0/1:2,7:9:15.19:112,0,15
chr10	46899846	.	C	CCTTT	2757.56	PASS	AB=0.595;AC=17;AF=0.304;AN=56;BaseQRankSum=-3.464;DP=522;FS=1.824;HRun=0;HaplotypeScore=134.5490;InbreedingCoeff=0.1877;MQ=67.39;MQ0=1;MQRankSum=-1.424;QD=11.54;ReadPosRankSum=0.793;VQSLOD=3.4847;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:7,0:43:46.18:418,0,46	0/0:1,0:5:11.95:0,12,91	0/0:18,0:14:10.26:0,10,305	0/0:9,0:7:15.02:0,15,247	0/0:5,0:27:80.24:0,80,677	0/1:3,0:22:29.37:219,0,29	1/1:0,0:16:6.39:255,6,0	0/0:6,0:25:71.61:0,72,551	0/1:5,0:13:47.54:76,0,48	0/0:2,0:23:52.58:0,53,431	0/0:2,0:13:27.94:0,28,255	1/1:1,0:14:11.33:157,11,0	1/1:2,0:24:33.90:279,34,0	0/0:2,0:15:27.41:0,27,228	0/0:1,0:24:52.07:0,52,395	0/0:1,0:18:44.83:0,45,396	0/0:5,0:39:66.34:0,66,733	0/0:5,0:24:37.79:0,38,569	0/1:5,0:10:61.05:137,0,61	0/1:12,1:23:99:464,0,141	1/1:3,0:11:14.98:192,15,0	0/1:4,0:14:62.93:138,0,63	0/1:3,0:10:22.83:78,0,23	0/1:2,0:18:18.20:175,0,18	0/0:1,0:15:19.51:0,20,254	0/0:4,0:24:62.54:0,63,518	0/1:7,0:19:70.13:348,0,70	0/0:0,0:4:5.98:0,6,46
chr10	46903398	.	C	CT	1239.89	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-6.063;DP=521;FS=0.000;HRun=8;HaplotypeScore=56.7348;InbreedingCoeff=0.9806;MQ=80.01;MQ0=0;MQRankSum=0.429;QD=26.38;ReadPosRankSum=-0.693;VQSLOD=3.9234;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:78.03:0,78,713	0/0:4,0:4:12.01:0,12,110	0/0:28,0:26:18.46:0,18,299	0/0:18,0:17:32.82:0,33,296	0/0:26,0:26:63.03:0,63,576	0/0:11,0:11:30.02:0,30,275	0/0:18,0:19:41.05:0,41,363	0/0:40,0:39:98.99:0,99,892	0/0:9,0:9:24.01:0,24,220	1/1:4,14:18:17.69:447,18,0	1/1:1,15:16:45.13:519,45,0	0/0:12,0:12:30.01:0,30,274	0/0:12,0:12:33.02:0,33,302	0/0:12,0:12:30.01:0,30,275	0/0:13,0:13:24.01:0,24,220	0/0:24,0:24:59.97:0,60,537	0/0:18,0:18:45.02:0,45,412	0/0:36,0:36:87.03:0,87,796	0/0:25,0:25:66.03:0,66,601	0/0:18,0:18:51.01:0,51,462	0/0:19,0:19:57.03:0,57,522	0/0:14,0:14:36.01:0,36,329	0/0:18,0:18:51.02:0,51,467	0/0:14,0:14:35.97:0,36,321	1/1:0,12:13:36.11:415,36,0	0/0:23,0:23:60.02:0,60,549	0/0:19,0:19:48:0,48,434	0/0:9,0:9:27.01:0,27,247
chr10	46903713	.	AAAGAAAAAAGG	A	441.04	PASS	AB=0.982;AC=14;AF=0.250;AN=56;BaseQRankSum=8.531;DP=422;FS=34.832;HRun=0;HaplotypeScore=93.3254;InbreedingCoeff=-0.2524;MQ=36.26;MQ0=69;MQRankSum=-2.616;QD=2.01;ReadPosRankSum=-0.880;VQSLOD=-0.0542;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:24:19.41:19,0,307	0/0:8,0:6:3.51:0,4,376	0/0:24,0:2:3.01:0,3,62	0/0:29,0:3:9:0,9,188	0/1:13,0:13:50:50,0,209	1/1:14,0:10:5.97:44,6,0	0/1:20,0:17:1.63:2,0,436	0/0:26,0:25:32.93:0,33,1010	0/1:10,0:10:32.97:33,0,88	0/1:16,6:20:99:173,0,704	0/0:3,0:3:6.49:0,6,102	0/1:10,0:10:33.02:33,0,129	0/1:12,0:11:49.02:49,0,141	0/0:7,0:5:12.04:0,12,242	0/0:17,0:16:36.10:0,36,773	0/1:12,0:10:22.15:22,0,307	0/1:28,0:17:18.15:18,0,230	0/0:21,0:11:2.25:0,2,293	0/0:20,0:16:6.89:0,7,562	0/0:6,0:6:1.71:0,2,102	0/0:6,0:3:6:0,6,70	0/1:13,0:11:31.30:31,0,92	0/1:11,0:8:7.71:71,0,8	0/0:9,0:4:3.01:0,3,67	0/0:12,0:12:2.15:0,2,335	0/0:6,0:6:17.93:0,18,292	0/1:25,0:23:38.75:39,0,540	0/0:9,0:7:12.96:0,13,241
chr10	46903739	.	A	AGG	841.94	PASS	AB=0.940;AC=13;AF=0.232;AN=56;BaseQRankSum=2.976;DP=644;FS=0.000;HRun=0;HaplotypeScore=90.8077;InbreedingCoeff=-0.1398;MQ=38.25;MQ0=114;MQRankSum=-0.483;QD=3.25;ReadPosRankSum=-1.326;VQSLOD=1.9570;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:16,4:19:81.50:96,0,82	0/0:13,0:11:29.62:0,30,384	0/0:43,0:4:9.03:0,9,122	0/1:58,0:6:6.80:7,0,124	0/0:26,0:26:57.93:0,58,708	0/1:16,0:14:30.50:33,0,31	0/1:15,4:19:65.55:66,0,115	0/0:33,0:26:57.58:0,58,650	0/0:10,1:9:5.95:0,6,42	0/0:31,0:28:68.47:0,68,795	0/0:17,0:13:28.41:0,28,327	0/1:13,0:12:29.74:30,0,51	0/1:15,1:13:22:148,0,22	0/0:21,0:16:26.62:0,27,398	0/0:23,0:21:38.61:0,39,477	0/0:18,0:15:32.67:0,33,349	0/0:39,0:30:44.78:0,45,448	0/0:22,0:12:27.68:0,28,298	0/1:30,1:21:59.45:189,0,59	0/1:14,0:11:23.43:93,0,23	0/1:14,0:8:20.03:105,0,20	0/1:12,0:9:8.85:9,0,41	0/0:14,0:10:5.95:0,6,42	1/1:14,0:7:6.06:58,6,0	0/0:16,0:15:23.69:0,24,383	0/0:28,0:22:41.32:0,41,588	0/1:25,2:25:99:162,0,136	0/0:30,0:13:33.04:0,33,395
chr10	46910012	.	AAAG	A	10204.34	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=12.910;DP=567;FS=19.850;HRun=0;HaplotypeScore=90.9730;InbreedingCoeff=0.9612;MQ=79.35;MQ0=1;MQRankSum=-3.511;QD=38.36;ReadPosRankSum=4.809;VQSLOD=4.2480;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,38:40:93.21:1480,93,0	0/0:4,0:4:12.04:0,12,253	0/0:25,0:23:46.93:0,47,855	0/0:29,0:24:47.46:0,47,725	0/0:24,0:24:69.17:0,69,1449	1/1:0,16:16:35.99:498,36,0	1/1:0,27:27:72.20:1140,72,0	0/0:24,0:24:69.23:0,69,1441	1/1:0,10:10:24.08:389,24,0	0/0:16,0:16:48.16:0,48,998	0/0:13,0:13:38.99:0,39,725	1/1:0,22:22:57.19:925,57,0	1/1:1,18:19:45.15:731,45,0	0/0:15,0:15:45.11:0,45,865	0/0:21,0:21:63.22:0,63,1379	0/0:31,1:32:41.57:0,42,1855	0/0:39,0:39:99:0,111,2386	0/0:13,0:13:36.02:0,36,646	1/1:1,21:22:63.16:948,63,0	1/1:0,11:11:33.03:478,33,0	1/1:1,15:16:39.09:593,39,0	1/1:0,10:10:30.06:458,30,0	1/1:0,14:14:33.11:523,33,0	1/1:5,30:35:59.37:973,59,0	0/0:13,0:13:36.12:0,36,795	0/0:29,0:29:78.25:0,78,1636	1/1:1,23:24:66.23:1069,66,0	0/0:3,0:3:0.43:0,0,125
chr10	46910178	.	GTGC	G	19052.21	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-0.504;DP=547;FS=0.666;HRun=0;HaplotypeScore=83.8884;InbreedingCoeff=0.9845;MQ=77.50;MQ0=0;MQRankSum=-9.792;QD=37.58;ReadPosRankSum=5.432;VQSLOD=5.3191;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,31:35:75.26:1194,75,0	1/1:1,10:11:24.08:386,24,0	0/0:17,0:17:48.15:0,48,959	0/0:23,0:23:55.07:0,55,1156	1/1:1,10:11:18.06:289,18,0	1/1:0,12:12:30.10:482,30,0	1/1:2,22:24:48.16:771,48,0	1/1:0,34:34:96.33:1510,96,0	1/1:2,18:20:45.15:723,45,0	1/1:1,7:8:21.07:327,21,0	1/1:1,10:11:21.07:337,21,0	1/1:1,25:26:69.19:1080,69,0	1/1:1,12:13:36.12:578,36,0	1/1:2,20:23:45.15:722,45,0	1/1:0,23:23:60.20:964,60,0	1/1:0,24:24:60.20:964,60,0	1/1:0,22:22:66.23:1060,66,0	1/1:2,21:23:54.18:868,54,0	1/1:2,18:20:54.17:822,54,0	1/1:0,15:15:42.14:675,42,0	1/1:8,30:38:69.12:1098,69,0	1/1:0,9:9:24.08:386,24,0	1/1:3,6:9:18.06:284,18,0	1/1:0,28:28:63.18:1011,63,0	1/1:4,8:12:30.10:467,30,0	1/1:2,13:15:45.12:656,45,0	1/1:3,21:24:60.20:963,60,0	1/1:2,15:16:27.09:434,27,0
chr10	46910662	.	TTGTCTAGTC	T	8347.72	PASS	AB=0.966;AC=16;AF=0.286;AN=56;BaseQRankSum=14.637;DP=659;FS=1.331;HRun=0;HaplotypeScore=183.5464;InbreedingCoeff=0.8329;MQ=87.59;MQ0=0;MQRankSum=-14.770;QD=41.95;ReadPosRankSum=3.667;VQSLOD=4.7783;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,20:21:36.12:1065,36,0	0/0:10,0:10:30.10:0,30,1463	0/0:23,0:24:69.16:0,69,2018	0/0:32,0:32:89.42:0,89,3681	0/0:31,0:31:93.27:0,93,3950	0/0:19,0:19:57.16:0,57,2578	0/0:20,0:20:60.19:0,60,2441	0/0:28,0:28:84.28:0,84,3597	1/1:0,22:22:41.80:1361,42,0	0/0:22,0:22:63.20:0,63,2690	0/0:18,0:18:51.15:0,51,2091	1/1:0,22:22:48.16:1540,48,0	1/1:0,24:24:54.19:1698,54,0	0/0:32,0:32:96.29:0,96,3950	0/0:27,0:27:81.25:0,81,3423	0/1:28,1:29:10.03:10,0,3764	0/0:35,0:35:99:0,105,4774	0/0:14,0:14:42.12:0,42,1876	0/0:17,0:17:51.12:0,51,1860	0/0:23,0:23:69.19:0,69,3115	0/0:21,0:21:63.18:0,63,2723	1/1:0,18:18:33.11:1007,33,0	1/1:0,21:21:42.14:1235,42,0	1/1:0,14:14:14.74:419,15,0	0/0:20,0:20:60.17:0,60,2599	0/1:27,1:28:13.16:13,0,3405	0/0:44,0:44:99:0,132,5653	0/0:23,0:23:69.24:0,69,3454
chr10	46911474	.	AGGT	A	1526.03	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.634;DP=652;FS=8.066;HRun=0;HaplotypeScore=99.2978;InbreedingCoeff=0.9283;MQ=71.22;MQ0=0;MQRankSum=-0.777;QD=42.39;ReadPosRankSum=0.742;VQSLOD=5.0461;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:54.19:0,54,1224	1/1:0,15:15:45.15:748,45,0	0/0:5,0:4:4.24:0,4,136	0/0:14,0:14:27.01:0,27,395	0/0:32,0:32:93.32:0,93,2073	0/0:26,0:26:78.27:0,78,1767	0/0:23,0:23:69.24:0,69,1547	0/0:41,0:41:99:0,120,2612	0/0:23,0:23:69.24:0,69,1559	0/0:25,0:25:75.26:0,75,1677	0/0:29,0:29:81.28:0,81,1830	0/0:31,0:31:87.30:0,87,1952	0/0:13,0:13:39.13:0,39,884	0/0:19,0:19:54.19:0,54,1224	1/1:1,20:21:54.18:900,54,0	0/0:30,0:30:90.29:0,90,1977	0/0:14,0:14:42.14:0,42,951	0/0:7,0:7:21.07:0,21,449	0/0:18,0:18:45.15:0,45,1005	0/0:33,0:33:99:0,99,2242	0/0:32,0:32:84.02:0,84,1904	0/0:24,0:24:66.23:0,66,1496	0/0:22,0:22:66.23:0,66,1486	0/0:24,0:24:72.25:0,72,1630	0/0:20,0:20:57.20:0,57,1292	0/0:29,0:29:87.30:0,87,1965	0/0:48,0:48:99:0,138,3094	0/0:13,0:13:36.12:0,36,816
chr10	46911560	.	C	CAT	1509.51	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-8.215;DP=655;FS=0.661;HRun=0;HaplotypeScore=105.4257;InbreedingCoeff=0.9831;MQ=69.96;MQ0=0;MQRankSum=-0.858;QD=39.72;ReadPosRankSum=0.965;VQSLOD=5.4378;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:87.26:0,87,1114	1/1:4,11:15:36.11:586,36,0	0/0:22,0:22:47.61:0,48,543	0/0:17,0:17:29.89:0,30,331	0/0:35,0:35:90.25:0,90,1126	0/0:27,0:26:72.22:0,72,922	0/0:14,0:14:42.08:0,42,488	0/0:27,0:27:75.11:0,75,873	0/0:18,0:18:48.16:0,48,621	0/0:22,0:21:60.10:0,60,722	0/0:22,0:22:51.15:0,51,647	0/0:28,0:28:84.20:0,84,1019	0/0:19,0:19:54.13:0,54,657	0/0:27,0:27:69.22:0,69,895	1/1:5,18:23:63.20:1045,63,0	0/0:34,0:34:87.27:0,87,1117	0/0:15,0:15:39.13:0,39,507	0/0:11,0:11:26.12:0,26,319	0/0:20,0:20:48.12:0,48,573	0/0:26,0:26:69.19:0,69,866	0/0:25,0:25:69.21:0,69,881	0/0:19,0:19:51.14:0,51,647	0/0:28,0:28:60.17:0,60,751	0/0:24,0:24:63.14:0,63,759	0/0:29,0:29:81.21:0,81,1008	0/0:25,0:25:75.23:0,75,962	0/0:43,0:43:99:0,102,1221	0/0:8,0:8:11.97:0,12,120
chr10	46912004	.	C	CAA	11407.44	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-15.946;DP=631;FS=6.503;HRun=6;HaplotypeScore=69.8588;InbreedingCoeff=0.9979;MQ=79.66;MQ0=1;MQRankSum=-0.682;QD=38.28;ReadPosRankSum=1.567;VQSLOD=4.3257;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,35:39:93.28:1542,93,0	1/1:0,9:9:24.97:407,25,0	0/0:19,0:18:29:0,29,455	0/0:18,0:18:35.58:0,36,393	0/0:39,0:39:99:0,108,1317	1/1:3,19:23:51.17:863,51,0	1/1:2,7:9:21.07:355,21,0	0/0:29,0:29:81.23:0,81,968	1/1:1,19:20:48.16:788,48,0	0/0:37,0:37:99:0,102,1223	0/0:30,0:30:84.21:0,84,1007	1/1:1,15:17:36.12:609,36,0	1/1:4,9:13:18.06:304,18,0	0/0:24,0:24:72.20:0,72,853	1/1:2,23:25:54.18:913,54,0	0/0:30,0:30:84.26:0,84,1025	0/0:19,0:19:54.15:0,54,644	0/0:13,0:13:39.12:0,39,471	1/1:6,13:20:42.06:586,42,0	1/1:2,27:28:78.16:1229,78,0	1/1:0,15:15:42.14:710,42,0	1/1:4,16:20:39.09:615,39,0	1/1:1,19:20:48.16:812,48,0	1/1:2,11:13:30.10:507,30,0	0/0:27,0:27:78.24:0,78,950	0/0:32,0:32:96.29:0,96,1159	1/1:1,25:25:69.24:1167,69,0	0/0:16,0:16:48.15:0,48,585
chr10	46912963	.	A	AT	719.49	PASS	AB=0.857;AC=5;AF=0.089;AN=56;BaseQRankSum=-7.575;DP=517;FS=3.489;HRun=10;HaplotypeScore=56.7986;InbreedingCoeff=0.6694;MQ=64.03;MQ0=0;MQRankSum=0.392;QD=17.99;ReadPosRankSum=0.225;VQSLOD=4.2323;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:71.90:0,72,591	0/0:7,0:7:20.94:0,21,168	0/0:7,0:5:8.89:0,9,65	0/0:14,0:12:17.01:0,17,181	0/0:26,0:26:56.87:0,57,468	1/1:1,19:20:60.07:625,60,0	1/1:1,7:8:18.05:192,18,0	0/0:38,0:39:82.89:0,83,668	0/0:10,0:10:29.97:0,30,246	0/0:20,0:20:44.90:0,45,364	0/0:18,0:18:38.92:0,39,320	0/0:17,0:17:47.94:0,48,394	0/0:21,0:21:53.18:0,53,441	0/0:21,0:21:53.92:0,54,443	0/0:21,0:21:41.92:0,42,344	0/0:16,0:16:38.93:0,39,320	0/0:23,0:23:56.93:0,57,468	0/0:15,1:16:6.70:0,7,250	0/0:27,0:29:67.92:0,68,548	0/0:21,0:21:47.91:0,48,391	0/1:10,2:12:30.75:31,0,189	0/0:6,0:6:5.98:0,6,49	0/0:16,0:16:47.95:0,48,394	0/0:5,0:5:8.97:0,9,74	0/0:23,0:23:50.90:0,51,419	0/0:22,0:24:63.98:0,64,501	0/0:38,0:39:94.89:0,95,769	0/0:7,0:7:14.93:0,15,114
chr10	46912991	.	TCTGCTCACTG	T	2089.73	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.779;DP=545;FS=2.894;HRun=0;HaplotypeScore=159.3113;InbreedingCoeff=0.9780;MQ=64.43;MQ0=1;MQRankSum=-7.379;QD=67.41;ReadPosRankSum=1.612;VQSLOD=3.6207;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:90.31:0,90,4685	1/1:0,12:12:27.09:828,27,0	0/0:18,0:16:42.14:0,42,2129	0/0:11,0:9:27.09:0,27,919	0/0:20,0:20:57.20:0,57,2974	0/0:25,0:25:75.24:0,75,3690	0/0:8,0:8:24.08:0,24,1251	0/0:30,0:30:84.27:0,84,3592	0/0:15,0:15:45.15:0,45,2264	0/0:18,0:18:51.17:0,51,2618	0/0:16,0:16:48.16:0,48,2542	0/0:17,0:17:51.18:0,51,2493	0/0:19,0:19:57.20:0,57,2985	0/0:18,0:18:51.18:0,51,2663	1/1:3,16:19:42.14:1383,42,0	0/0:11,0:11:30.10:0,30,1588	0/0:32,0:32:96.33:0,96,5086	0/0:23,0:23:69.24:0,69,3506	0/0:29,0:29:81.28:0,81,3990	0/0:26,0:26:75.26:0,75,3869	0/0:19,0:19:57.20:0,57,2848	0/0:4,0:4:12.04:0,12,635	0/0:17,0:17:48.16:0,48,2474	0/0:13,0:13:39.13:0,39,2062	0/0:23,0:23:69.24:0,69,3519	0/0:29,0:29:84.29:0,84,4211	0/0:33,0:32:96.33:0,96,4773	0/0:8,0:7:18.06:0,18,947
chr10	46913560	.	T	TA	472.17	PASS	AB=0.972;AC=7;AF=0.125;AN=56;BaseQRankSum=4.672;DP=600;FS=2.352;HRun=11;HaplotypeScore=74.2038;InbreedingCoeff=0.5520;MQ=66.96;MQ0=5;MQRankSum=-2.333;QD=3.19;ReadPosRankSum=-1.918;VQSLOD=-0.3341;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:41.12:0,41,307	1/1:4,7:11:27.05:274,27,0	0/1:51,1:25:13.55:14,0,107	0/1:55,1:25:0.35:0,0,89	0/0:27,0:27:45.93:0,46,505	0/0:22,2:28:7.02:0,7,379	0/0:17,0:17:35.79:0,36,270	0/0:22,0:22:34.77:0,35,253	0/0:13,0:14:37.78:0,38,271	0/0:24,0:24:50.75:0,51,395	0/0:17,0:19:54.77:0,55,398	0/0:15,0:15:35.84:0,36,277	0/0:18,0:18:24.52:0,25,315	0/0:13,0:13:23.88:0,24,182	1/1:7,9:16:32.86:307,33,0	0/0:12,0:12:29.86:0,30,231	0/0:28,0:29:64.77:0,65,491	0/0:15,0:15:41.68:0,42,312	0/0:17,0:18:25.88:0,26,191	0/0:21,1:22:19.58:0,20,333	0/0:8,0:8:20.15:0,20,147	0/0:15,0:16:42.44:0,42,312	0/0:30,0:30:77.35:0,77,576	0/0:12,0:12:26.88:0,27,207	0/0:19,0:19:53.75:0,54,411	0/0:21,0:22:52.78:0,53,396	0/0:32,0:33:82.64:0,83,626	0/1:7,0:7:11.16:11,0,56
chr10	46913597	.	AAAC	A	676.38	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.820;DP=598;FS=5.274;HRun=0;HaplotypeScore=88.6225;InbreedingCoeff=0.9669;MQ=63.65;MQ0=7;MQRankSum=-1.573;QD=24.16;ReadPosRankSum=0.464;VQSLOD=2.8861;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:60.16:0,60,1128	1/1:3,5:8:15.05:221,15,0	0/0:48,0:27:42.06:0,42,886	0/0:52,0:35:12.34:0,12,657	0/0:22,0:22:57.19:0,57,1156	0/0:31,0:31:72.24:0,72,1358	0/0:11,0:11:27.09:0,27,506	0/0:35,0:35:78.19:0,78,1448	0/0:10,0:10:21.07:0,21,435	0/0:28,0:28:78.73:0,79,1506	0/0:16,0:16:45.15:0,45,933	0/0:18,0:18:42.14:0,42,841	0/0:13,0:13:33.11:0,33,650	0/0:9,0:9:18.06:0,18,323	1/1:1,19:19:39.13:574,39,0	0/0:21,0:21:60.21:0,60,1241	0/0:27,0:27:44.71:0,45,1102	0/0:18,0:18:42.06:0,42,827	0/0:23,0:22:45.14:0,45,873	0/0:21,0:21:51.15:0,51,943	0/0:8,0:8:24.08:0,24,423	0/0:14,0:14:27.09:0,27,467	0/0:25,0:25:63.21:0,63,1189	0/0:16,0:16:45.15:0,45,904	0/0:18,0:18:42.13:0,42,810	0/0:24,0:24:60.20:0,60,1198	0/0:26,1:27:22.04:0,22,1167	0/0:11,0:11:30.10:0,30,597
chr10	46914917	.	TA	T	5738.97	PASS	AB=0.579;AC=21;AF=0.375;AN=56;BaseQRankSum=11.649;DP=541;FS=4.321;HRun=9;HaplotypeScore=62.9836;InbreedingCoeff=0.9014;MQ=74.23;MQ0=1;MQRankSum=0.096;QD=22.51;ReadPosRankSum=0.324;VQSLOD=5.7581;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:57.17:0,57,657	0/0:3,0:3:6.02:0,6,67	0/0:33,1:23:8.92:0,9,250	0/0:18,0:13:20.35:0,20,232	1/1:2,31:33:86.96:784,87,0	0/0:24,0:24:60.17:0,60,683	0/0:10,0:10:24.07:0,24,277	1/1:1,29:30:86.99:781,87,0	0/0:20,0:20:51.15:0,51,588	1/1:1,18:19:51.02:466,51,0	1/1:3,20:23:59.99:540,60,0	0/0:9,0:9:27.08:0,27,311	0/0:7,0:7:15.03:0,15,163	1/1:0,12:12:30.02:275,30,0	0/0:17,0:17:51.14:0,51,580	0/1:3,8:11:10.61:168,0,11	1/1:3,35:38:73.07:804,73,0	1/1:2,24:26:57.03:521,57,0	0/0:20,0:20:51.14:0,51,581	0/0:21,0:21:54.14:0,54,612	0/0:11,0:11:30.04:0,30,315	0/0:8,0:8:18.05:0,18,207	0/0:16,0:16:45.12:0,45,510	0/0:11,0:11:33.08:0,33,369	1/1:3,24:27:60.02:549,60,0	1/1:1,25:26:72.04:659,72,0	0/0:31,0:31:60.17:0,60,683	1/1:0,10:10:21.01:192,21,0
chr10	46915397	.	TTC	T	2882.41	PASS	AB=0.990;AC=26;AF=0.464;AN=56;BaseQRankSum=1.832;DP=480;FS=12.964;HRun=0;HaplotypeScore=96.8317;InbreedingCoeff=0.6434;MQ=66.03;MQ0=9;MQRankSum=-3.118;QD=10.68;ReadPosRankSum=-1.006;VQSLOD=2.0282;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:21:24.25:0,24,396	0/0:11,0:11:16.59:0,17,169	0/0:37,0:23:12.73:0,13,204	0/0:42,0:12:3.03:0,3,78	1/1:28,0:27:19.73:373,20,0	0/1:18,0:18:16.14:16,0,230	0/0:11,0:11:11:0,11,170	1/1:20,1:21:33.24:341,33,0	0/0:6,0:6:15.03:0,15,173	1/1:16,0:15:29.59:327,30,0	1/1:20,2:21:45.04:378,45,0	0/0:14,0:14:30.07:0,30,330	0/0:9,0:9:24.06:0,24,302	1/1:12,0:11:23.60:160,24,0	0/0:6,0:6:8.99:0,9,125	1/1:7,0:7:13.33:158,13,0	1/1:20,1:17:12.58:129,13,0	1/1:23,0:23:12.24:264,12,0	0/1:23,1:21:42.92:43,0,84	0/0:16,0:16:1.74:0,2,125	0/1:5,0:5:1.71:2,0,19	0/0:9,0:8:18.04:0,18,238	0/0:21,0:19:48.34:0,48,566	0/0:6,0:6:8.99:0,9,98	1/1:8,1:9:16.74:174,17,0	1/1:26,2:27:56:525,56,0	0/1:25,0:25:99:123,0,124	1/1:11,0:10:11.82:75,12,0
chr10	46915398	.	TC	T	4157.37	PASS	AB=0.946;AC=27;AF=0.482;AN=56;BaseQRankSum=1.214;DP=474;FS=24.149;HRun=1;HaplotypeScore=86.0342;InbreedingCoeff=0.5443;MQ=66.16;MQ0=10;MQRankSum=-2.704;QD=13.59;ReadPosRankSum=-1.476;VQSLOD=1.2096;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:21:20.12:0,20,262	0/0:11,0:11:1.98:0,2,121	0/0:37,0:23:1.27:0,1,205	0/1:38,3:11:9:9,0,85	1/1:25,3:27:48.56:567,49,0	0/1:17,1:18:43.91:44,0,111	0/0:11,0:11:14.42:0,14,139	1/1:20,0:20:49.17:415,49,0	0/0:7,0:7:14.49:0,14,113	1/1:14,2:15:41.07:355,41,0	1/1:17,5:21:54.62:527,55,0	0/0:14,0:14:1.56:0,2,199	0/0:9,0:9:23.96:0,24,220	1/1:10,2:11:27.94:221,28,0	0/1:6,0:6:24.76:25,0,69	1/1:4,3:7:20.27:226,20,0	1/1:20,1:17:27.39:243,27,0	1/1:20,3:23:52.39:457,52,0	0/1:23,1:20:42.16:42,0,141	0/0:16,0:16:35.48:0,35,202	0/0:5,0:5:8.04:0,8,45	0/0:9,0:8:18.03:0,18,181	0/0:21,0:19:49.71:0,50,450	0/0:6,0:6:8.99:0,9,82	1/1:6,2:8:23.39:223,23,0	1/1:26,1:27:73.60:635,74,0	0/1:22,3:25:7.38:7,0,218	1/1:1,7:7:12.04:161,12,0
chr10	46915399	.	CTT	C	793.61	PASS	AB=0.889;AC=18;AF=0.321;AN=56;BaseQRankSum=-2.376;DP=487;FS=5.063;HRun=16;HaplotypeScore=104.5245;InbreedingCoeff=0.1167;MQ=65.15;MQ0=15;MQRankSum=0.498;QD=2.92;ReadPosRankSum=2.111;VQSLOD=-0.2174;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:23:36.90:0,37,382	0/1:7,1:11:31.39:31,0,60	1/1:39,0:23:3.89:29,4,0	0/1:41,0:11:6.16:12,0,6	0/0:28,0:27:6.23:0,6,221	0/1:7,1:17:13.01:13,0,116	0/1:8,1:11:14.29:14,0,45	0/0:21,0:21:0.19:0,0,109	0/0:7,0:7:17.92:0,18,188	0/1:15,0:14:15.68:16,0,75	0/1:24,0:23:7.20:7,0,148	0/0:14,0:14:35.48:0,35,342	0/0:10,0:10:24.02:0,24,273	0/0:12,0:11:5.50:0,6,67	0/0:4,0:6:13.26:0,13,103	0/1:7,0:7:15.20:15,0,71	0/0:22,0:18:3.43:0,3,73	0/0:25,0:23:20.03:0,20,259	1/1:16,6:20:9.84:185,10,0	1/1:11,5:16:13.17:147,13,0	0/1:3,2:5:3.99:41,0,4	0/0:9,0:8:18.02:0,18,214	0/0:21,0:19:22.76:0,23,483	0/0:6,0:6:5.97:0,6,58	0/1:8,0:8:14.62:15,0,65	0/1:28,0:28:28.57:29,0,116	1/1:16,8:25:46.18:408,46,0	0/0:10,0:7:11.19:0,11,53
chr10	46915432	.	T	TCGGAGCTGGGGAC	33514.65	PASS	AC=50;AF=0.926;AN=54;BaseQRankSum=-4.584;DP=440;FS=18.279;HRun=0;HaplotypeScore=127.6955;InbreedingCoeff=0.6716;MQ=44.35;MQ0=20;MQRankSum=-2.077;QD=93.10;ReadPosRankSum=2.474;VQSLOD=3.4248;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,10:24:30.10:1456,30,0	1/1:6,2:9:21.04:1066,21,0	0/0:38,0:12:1.44:0,1,336	0/0:37,0:9:12.44:0,12,233	1/1:10,9:19:30.09:1770,30,0	1/1:12,9:19:45.15:2725,45,0	1/1:8,2:9:9.03:579,9,0	1/1:7,2:7:18.06:871,18,0	1/1:7,1:8:12.04:651,12,0	1/1:9,2:11:26.77:937,27,0	1/1:10,2:12:18.05:817,18,0	1/1:14,5:21:42.14:2505,42,0	1/1:9,4:13:30.10:1783,30,0	1/1:7,3:11:30.10:1702,30,0	1/1:11,7:18:39.13:2177,39,0	1/1:11,2:12:33.11:1937,33,0	1/1:9,2:9:9.03:565,9,0	1/1:12,1:12:15.05:850,15,0	1/1:12,3:15:36.12:1804,36,0	1/1:8,2:11:12.04:730,12,0	1/1:11,0:11:12.01:254,12,0	1/1:5,4:9:15.05:966,15,0	1/1:15,6:19:27.09:1721,27,0	1/1:4,3:6:3.01:76,3,0	1/1:9,3:13:21.07:1223,21,0	1/1:18,5:25:60.15:2877,60,0	1/1:12,3:16:33.11:1474,33,0	./.
chr10	46916069	.	AT	A	1600.90	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=9.470;DP=606;FS=2.708;HRun=10;HaplotypeScore=62.5801;InbreedingCoeff=0.9133;MQ=74.36;MQ0=0;MQRankSum=-1.939;QD=15.70;ReadPosRankSum=0.972;VQSLOD=4.0410;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:83.96:0,84,862	0/0:12,0:12:33.09:0,33,364	0/1:13,0:13:1.55:2,0,192	0/0:11,0:11:17.74:0,18,153	0/0:27,0:27:75.16:0,75,805	0/0:28,0:30:80.88:0,81,851	0/0:14,0:15:38.93:0,39,404	0/0:33,0:33:72.19:0,72,791	0/0:22,0:23:53.20:0,53,623	0/0:29,0:29:69.09:0,69,735	0/0:28,0:28:63.17:0,63,697	0/0:16,0:16:33.09:0,33,365	0/0:18,0:18:16.02:0,16,372	0/0:27,1:28:43.07:0,43,687	0/0:22,1:25:40.99:0,41,604	0/0:26,1:27:49.15:0,49,770	0/0:16,0:16:42.11:0,42,465	0/0:20,0:20:44.89:0,45,464	1/1:4,13:17:38.95:331,39,0	1/1:4,21:25:56.86:485,57,0	1/1:3,19:23:53.02:449,53,0	0/0:30,0:30:65.80:0,66,761	0/0:14,0:14:36.09:0,36,391	0/0:13,0:15:41.95:0,42,442	0/0:26,0:26:66.15:0,66,707	0/0:21,0:21:45.10:0,45,479	1/1:3,21:24:56.99:495,57,0	0/0:9,0:9:26.99:0,27,274
chr10	46916240	.	CA	C	6587.18	PASS	AB=0.679;AC=46;AF=0.821;AN=56;BaseQRankSum=1.038;DP=519;FS=2.081;HRun=13;HaplotypeScore=59.6790;InbreedingCoeff=0.5295;MQ=75.98;MQ0=3;MQRankSum=-1.290;QD=14.23;ReadPosRankSum=4.828;VQSLOD=5.4578;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,27:30:35.46:413,35,0	0/0:5,0:5:12.02:0,12,117	0/0:30,1:15:20.75:0,21,130	0/1:17,0:14:8.86:9,0,80	1/1:3,17:22:25.54:329,26,0	1/1:3,23:26:56.66:416,57,0	1/1:1,12:13:29.83:219,30,0	1/1:2,17:19:52.64:370,53,0	1/1:4,18:22:41.75:306,42,0	1/1:5,18:23:50.63:367,51,0	1/1:1,19:21:55.65:394,56,0	1/1:4,13:17:29.72:219,30,0	1/1:4,11:15:28:216,28,0	0/1:3,9:13:35.45:92,0,35	0/0:20,0:20:33.03:0,33,308	1/1:2,13:15:12.27:217,12,0	1/1:3,31:34:77.54:569,78,0	1/1:2,10:12:26.84:197,27,0	0/1:5,13:19:4.81:239,0,5	1/1:5,14:19:25.27:225,25,0	0/1:3,11:15:23.46:168,0,23	1/1:5,5:10:14.82:105,15,0	1/1:3,13:16:35.43:261,35,0	1/1:4,15:19:21.49:318,21,0	1/1:0,9:9:20.88:153,21,0	1/1:6,21:27:59.59:434,60,0	1/1:7,14:21:32.76:240,33,0	1/1:3,5:8:14.88:109,15,0
chr10	46917025	.	GA	G	2006.67	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=3.094;DP=446;FS=7.817;HRun=9;HaplotypeScore=71.4938;InbreedingCoeff=0.9217;MQ=76.40;MQ0=2;MQRankSum=-5.913;QD=17.01;ReadPosRankSum=1.885;VQSLOD=3.6396;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,16:22:53.96:481,54,0	0/0:5,0:5:15.04:0,15,173	0/0:29,1:18:31.36:0,31,202	0/0:16,0:9:14.40:0,14,78	0/0:32,0:31:63.17:0,63,717	1/1:6,12:18:38.97:343,39,0	1/1:8,4:12:26.91:224,27,0	0/0:26,0:26:72.14:0,72,768	1/1:5,10:15:33:298,33,0	0/0:29,0:29:74.50:0,75,797	0/0:15,0:15:39.12:0,39,450	1/1:4,1:5:11.90:92,12,0	1/1:5,9:14:35.96:315,36,0	0/0:12,0:12:30.04:0,30,322	0/0:20,0:20:33.04:0,33,356	0/1:11,0:11:3.84:4,0,175	0/0:20,0:20:45.09:0,45,495	0/0:13,0:13:24.07:0,24,277	0/0:15,0:15:42.07:0,42,453	0/0:13,0:13:27.07:0,27,301	0/0:9,0:9:12.04:0,12,138	1/1:1,7:8:21.01:192,21,0	1/1:2,4:6:15.01:137,15,0	1/1:3,4:7:14.99:133,15,0	0/0:22,0:22:60.13:0,60,651	0/0:18,0:18:48.12:0,48,537	0/0:23,0:23:66.14:0,66,721	0/0:10,0:10:27.08:0,27,311
chr10	46917065	.	GT	G	10687.24	PASS	AC=52;AF=0.963;AN=54;BaseQRankSum=-3.063;DP=368;FS=7.998;HRun=2;HaplotypeScore=48.9999;InbreedingCoeff=0.7821;MQ=46.06;MQ0=7;MQRankSum=0.619;QD=30.45;ReadPosRankSum=2.721;VQSLOD=3.7639;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,15:17:30.08:373,30,0	1/1:0,4:4:12.04:156,12,0	./.	0/0:13,0:4:8.61:0,9,69	1/1:2,24:25:51.17:662,51,0	1/1:0,12:11:24.08:311,24,0	1/1:0,6:6:15.05:194,15,0	1/1:1,20:18:54.18:700,54,0	1/1:0,12:10:27.09:350,27,0	1/1:0,27:27:81.26:1051,81,0	1/1:0,18:17:45.15:584,45,0	1/1:1,7:7:18.06:233,18,0	1/1:0,10:10:27.09:350,27,0	1/1:0,13:13:33.11:428,33,0	1/1:0,15:15:33.11:428,33,0	1/1:1,6:6:15.05:195,15,0	1/1:2,12:13:18.06:234,18,0	1/1:1,14:15:36.12:467,36,0	1/1:2,17:19:35.15:642,35,0	1/1:0,11:9:24.08:311,24,0	1/1:2,5:5:15.05:195,15,0	1/1:0,12:12:27.09:349,27,0	1/1:1,6:6:15.05:194,15,0	1/1:2,5:4:9.02:103,9,0	1/1:1,14:14:33.11:428,33,0	1/1:0,24:24:72.23:934,72,0	1/1:0,14:14:39.13:506,39,0	1/1:0,10:10:24.08:312,24,0
chr10	46918416	.	TAAAC	T	3188.75	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=10.801;DP=593;FS=7.351;HRun=0;HaplotypeScore=139.4480;InbreedingCoeff=0.9679;MQ=64.81;MQ0=1;MQRankSum=2.514;QD=20.98;ReadPosRankSum=1.245;VQSLOD=3.2206;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,20:32:33.50:497,33,0	0/0:7,0:7:15.05:0,15,358	0/0:21,0:18:5.98:0,6,92	0/0:26,0:24:24.05:0,24,462	0/0:24,0:24:57.20:0,57,1359	0/0:7,0:18:27.09:0,27,488	0/0:20,0:20:30.57:0,31,657	0/0:22,0:20:21.07:0,21,452	1/1:10,14:24:33.11:524,33,0	0/0:21,0:21:48.16:0,48,1146	0/0:14,0:14:30.10:0,30,710	1/1:8,12:20:23.97:381,24,0	1/1:7,11:18:30.07:450,30,0	0/0:22,0:22:42.14:0,42,977	0/0:27,1:28:12.54:0,13,1203	0/0:20,0:20:36.12:0,36,860	0/0:31,0:31:67.40:0,67,1380	0/0:22,0:22:51.16:0,51,1133	0/0:14,0:12:19.31:0,19,433	0/0:22,0:22:48.15:0,48,1059	0/0:32,0:32:60.21:0,60,1430	1/1:2,12:14:27.01:429,27,0	1/1:4,13:17:33.11:514,33,0	1/1:10,16:26:39.10:593,39,0	0/0:17,0:17:39.13:0,39,886	0/0:27,0:27:54.15:0,54,1105	0/0:24,1:25:18.50:0,18,1349	0/0:8,0:8:21.07:0,21,465
chr10	46918681	.	T	TAA	3698.58	PASS	AB=0.625;AC=21;AF=0.404;AN=52;BaseQRankSum=-4.703;DP=382;FS=0.000;HRun=12;HaplotypeScore=51.5429;InbreedingCoeff=0.8691;MQ=50.79;MQ0=21;MQRankSum=0.776;QD=21.63;ReadPosRankSum=-1.417;VQSLOD=2.2977;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:33:77.96:0,78,714	0/0:8,0:7:14.98:0,15,139	./.	0/0:4,0:4:8.40:0,8,51	1/1:6,7:13:20.25:226,20,0	0/0:16,0:14:26.98:0,27,250	0/0:10,0:10:27.02:0,27,249	1/1:16,19:33:39.27:726,39,0	0/0:12,0:13:26.66:0,27,234	1/1:4,8:14:26.58:343,27,0	1/1:4,10:13:27.09:378,27,0	0/0:13,0:11:26.99:0,27,250	0/0:16,0:18:26.46:0,26,268	1/1:3,5:8:19.60:240,20,0	0/0:7,0:8:8.86:0,9,130	1/1:4,8:10:18.02:230,18,0	1/1:2,10:11:26.58:345,27,0	1/1:2,8:11:24.04:304,24,0	0/0:26,0:25:50.54:0,51,447	0/0:14,0:13:23.87:0,24,222	0/0:10,0:8:18.02:0,18,167	./.	0/0:7,0:7:8.95:0,9,83	0/0:7,0:8:2.73:0,3,121	1/1:7,7:12:21.02:272,21,0	1/1:11,10:21:35.55:449,36,0	0/0:17,0:15:17.76:0,18,213	0/1:4,6:8:6.77:186,0,7
chr10	46921265	.	G	GA	2863.37	PASS	AB=0.582;AC=23;AF=0.411;AN=56;BaseQRankSum=-9.617;DP=586;FS=17.279;HRun=13;HaplotypeScore=74.7148;InbreedingCoeff=0.7160;MQ=63.58;MQ0=9;MQRankSum=0.065;QD=9.39;ReadPosRankSum=-2.777;VQSLOD=0.4875;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:8,33:42:39.95:370,0,40	0/0:5,0:7:13.92:0,14,88	0/0:17,0:7:15.78:0,16,88	0/0:10,0:6:8.55:0,9,53	0/0:7,0:23:29.01:0,29,85	0/1:5,8:14:5.73:83,0,6	0/1:6,14:21:1.48:109,0,1	0/0:7,0:29:42.71:0,43,122	1/1:6,13:17:0.04:146,0,0	0/0:5,0:23:27.44:0,27,80	0/0:3,0:6:10.18:0,10,29	1/1:22,7:29:22.72:415,23,0	1/1:5,16:23:6.23:176,6,0	0/0:2,0:18:27.40:0,27,91	0/0:21,0:21:54.53:0,55,352	0/0:6,0:20:27.33:0,27,91	0/0:15,0:37:48.25:0,48,163	0/0:2,0:16:26.48:0,26,76	1/1:6,19:27:15.77:401,16,0	1/1:6,17:22:34.46:272,34,0	1/1:2,18:21:17.86:154,18,0	1/1:6,15:22:9.90:244,10,0	1/1:3,8:11:11.85:98,12,0	1/1:18,12:29:35.26:419,35,0	0/0:7,0:18:27.87:0,28,92	0/0:6,0:20:29.17:0,29,96	1/1:4,17:22:4.48:179,4,0	0/0:4,0:12:16.28:0,16,47
chr10	46922093	.	T	TACCAACCA	413.15	PASS	AC=6;AF=0.333;AN=18;BaseQRankSum=-1.650;DP=264;FS=0.000;HRun=0;HaplotypeScore=30.8282;MQ=17.78;MQ0=187;MQRankSum=-0.350;QD=10.33;ReadPosRankSum=-0.850;VQSLOD=1.1572;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	0/0:18,0:7:8.88:0,9,173	./.	./.	./.	./.	0/0:14,0:3:9.02:0,9,184	0/0:10,0:7:8.95:0,9,173	./.	./.	./.	./.	./.	./.	./.	./.	1/1:4,10:14:3.01:126,3,0	./.	1/1:2,7:7:6.02:252,6,0	1/1:5,7:7:3.01:126,3,0	./.	0/0:13,0:10:11.66:0,12,88	0/0:10,0:1:3.01:0,3,78	./.	0/0:4,0:1:3.01:0,3,78
chr10	46922398	.	TA	T	3418.10	PASS	AB=0.708;AC=49;AF=0.875;AN=56;BaseQRankSum=-0.142;DP=522;FS=4.286;HRun=16;HaplotypeScore=87.5072;InbreedingCoeff=0.2295;MQ=55.49;MQ0=40;MQRankSum=-2.769;QD=6.78;ReadPosRankSum=3.100;VQSLOD=3.1056;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,1:33:45.06:143,45,0	1/1:0,0:5:10.19:29,10,0	0/0:17,0:7:11.95:0,12,91	0/1:16,0:9:6.06:6,0,51	1/1:10,15:21:22.58:177,23,0	1/1:5,1:19:17.18:54,17,0	1/1:2,0:12:12.66:38,13,0	1/1:10,11:19:25.28:186,25,0	1/1:6,1:17:25.57:84,26,0	1/1:9,14:19:34.24:204,34,0	1/1:1,14:16:37.04:215,37,0	1/1:10,1:33:26.79:107,27,0	1/1:2,0:10:16.28:47,16,0	1/1:6,17:21:46.61:280,47,0	1/1:4,0:23:33.97:99,34,0	1/1:6,10:16:33.43:184,33,0	1/1:4,20:21:46.50:277,47,0	1/1:1,11:12:23.36:140,23,0	0/1:10,7:17:38.29:101,0,38	1/1:10,9:17:31.94:177,32,0	0/1:4,9:13:19.14:88,0,19	0/1:5,0:15:3.87:32,0,4	1/1:4,1:15:14.24:59,14,0	1/1:3,0:23:28.41:82,28,0	1/1:0,5:6:10.86:59,11,0	1/1:5,13:19:36.81:228,37,0	0/1:9,9:16:7.33:121,0,7	1/1:3,13:16:25.06:202,25,0
chr10	46926951	.	T	TTG	1051.16	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-5.207;DP=642;FS=3.822;HRun=0;HaplotypeScore=83.2795;InbreedingCoeff=0.8489;MQ=72.94;MQ0=1;MQRankSum=-0.747;QD=27.66;ReadPosRankSum=1.226;VQSLOD=5.0696;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:87.19:0,87,1043	0/0:11,0:11:30.07:0,30,357	0/0:25,0:23:40.59:0,41,510	0/0:33,0:31:2.82:0,3,372	0/0:16,0:18:47.81:0,48,549	1/1:6,13:19:30.10:492,30,0	1/1:3,16:19:10.95:675,11,0	0/0:28,0:28:57.13:0,57,687	0/0:17,0:18:47.97:0,48,559	0/0:23,0:23:60.16:0,60,713	0/0:20,0:21:60.01:0,60,708	0/0:21,0:21:45.12:0,45,544	0/0:15,0:17:32.92:0,33,372	0/0:20,0:20:51.16:0,51,632	0/0:25,0:25:57.18:0,57,706	0/0:22,0:23:47.97:0,48,561	0/0:34,0:34:93.27:0,93,1138	0/0:20,0:20:54.14:0,54,654	0/0:17,0:17:33.10:0,33,409	0/0:28,0:28:75.22:0,75,917	0/0:39,0:38:30.48:0,30,886	0/0:16,0:17:41.96:0,42,487	0/0:26,0:26:69.11:0,69,803	0/0:22,0:23:69.05:0,69,832	0/0:22,0:22:42.13:0,42,521	0/0:33,0:33:84.16:0,84,1016	0/0:26,0:26:63.18:0,63,768	0/0:2,0:2:6.02:0,6,74
chr10	46934559	.	C	CT	5075.89	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-7.123;DP=605;FS=0.000;HRun=11;HaplotypeScore=67.4198;InbreedingCoeff=0.9134;MQ=72.10;MQ0=0;MQRankSum=0.260;QD=20.30;ReadPosRankSum=-2.741;VQSLOD=4.7234;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:41:83.63:0,84,603	0/0:17,0:17:38.69:0,39,290	0/0:14,0:10:10.84:0,11,61	0/0:11,0:11:1.33:0,1,57	1/1:10,17:27:60.04:584,60,0	0/0:11,0:12:31.90:0,32,235	0/0:11,0:12:31.92:0,32,238	1/1:9,27:37:76.98:751,77,0	0/0:16,0:16:44.78:0,45,342	1/1:13,17:30:46.56:584,47,0	1/1:11,13:24:8.99:407,9,0	0/0:16,0:16:32.81:0,33,248	0/0:18,1:19:17.29:0,17,305	1/1:11,9:21:41.84:385,42,0	0/0:22,0:22:50.28:0,50,365	1/1:8,14:22:7.57:418,8,0	1/1:5,11:16:18.82:363,19,0	1/1:4,16:20:48.06:476,48,0	0/0:22,0:22:47.80:0,48,370	0/0:35,0:36:72.37:0,72,686	0/0:14,0:14:15.96:0,16,213	0/0:29,0:29:68.58:0,69,518	0/0:17,0:17:44.19:0,44,317	0/0:17,0:19:48.86:0,49,357	1/1:9,9:18:24.48:384,24,0	1/1:16,18:34:72.06:693,72,0	0/0:36,0:37:55.20:0,55,588	1/1:0,1:1:3.01:30,3,0
chr10	46934643	.	AG	A	8941.24	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=13.773;DP=661;FS=0.000;HRun=2;HaplotypeScore=68.3075;InbreedingCoeff=0.9748;MQ=87.92;MQ0=0;MQRankSum=-1.141;QD=36.64;ReadPosRankSum=1.355;VQSLOD=5.3445;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,133,1979	0/0:13,0:13:39.13:0,39,585	0/0:20,0:20:60.20:0,60,879	0/0:29,0:29:45.83:0,46,948	1/1:1,27:28:81.19:1018,81,0	0/0:10,0:10:30.09:0,30,428	0/0:22,0:22:66.22:0,66,989	1/1:0,29:29:87.26:1104,87,0	0/0:22,0:22:66.22:0,66,984	1/1:1,27:28:78.23:987,78,0	1/1:0,28:28:75.24:973,75,0	0/0:24,0:24:72.23:0,72,1059	0/0:21,0:21:60.19:0,60,878	1/1:1,15:16:45.13:570,45,0	0/0:36,0:36:99:0,108,1617	1/1:1,26:27:78.24:999,78,0	1/1:0,19:19:57.19:739,57,0	1/1:0,15:15:42.10:527,42,0	0/0:20,0:20:57.19:0,57,852	0/0:29,0:29:87.29:0,87,1304	0/0:14,0:14:41.34:0,41,569	0/0:28,0:28:81.27:0,81,1211	0/0:19,0:19:57.19:0,57,853	0/0:34,0:34:99:0,102,1509	1/1:0,21:21:57.19:740,57,0	1/1:0,32:32:96.31:1245,96,0	0/0:28,0:28:84.28:0,84,1255	1/1:0,1:1:3.01:39,3,0
chr10	46935533	.	CAG	C	10590.74	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=16.479;DP=673;FS=3.835;HRun=0;HaplotypeScore=80.2261;InbreedingCoeff=0.9999;MQ=85.20;MQ0=0;MQRankSum=-3.015;QD=40.12;ReadPosRankSum=1.727;VQSLOD=6.9484;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,141,2609	0/0:16,0:16:48.16:0,48,898	0/0:25,0:25:75.26:0,75,1344	0/0:18,0:18:51.12:0,51,847	1/1:1,11:12:30.10:442,30,0	0/0:21,0:21:63.22:0,63,1171	0/0:17,0:17:51.17:0,51,948	1/1:1,36:37:99:1523,105,0	0/0:28,0:28:81.28:0,81,1503	1/1:0,25:25:75.24:1073,75,0	1/1:0,18:18:54.18:795,54,0	0/0:29,0:29:87.29:0,87,1599	0/0:17,0:17:51.16:0,51,924	1/1:1,16:17:45.15:661,45,0	0/0:30,0:30:90.31:0,90,1672	1/1:1,21:22:57.19:839,57,0	1/1:0,34:34:87.29:1281,87,0	1/1:1,26:27:75.25:1105,75,0	0/0:19,0:19:57.20:0,57,1058	0/0:27,0:27:78.27:0,78,1461	0/0:22,0:22:63.22:0,63,1171	0/0:22,0:22:66.23:0,66,1236	0/0:25,0:25:75.26:0,75,1404	0/0:18,0:18:51.17:0,51,955	1/1:2,22:24:66.22:972,66,0	1/1:2,28:30:84.28:1237,84,0	0/0:28,0:28:84.29:0,84,1558	1/1:0,18:18:45.15:663,45,0
chr10	46936347	.	AC	A	3535.49	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=9.986;DP=678;FS=12.258;HRun=3;HaplotypeScore=67.1368;InbreedingCoeff=0.9988;MQ=88.64;MQ0=0;MQRankSum=-5.976;QD=34.66;ReadPosRankSum=0.634;VQSLOD=3.2791;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:78.26:0,78,1121	0/0:15,0:15:45.13:0,45,627	0/0:22,0:22:61.55:0,62,775	0/0:27,0:27:78.21:0,78,1036	0/0:35,0:35:90.29:0,90,1276	0/0:31,0:31:93.26:0,93,1293	0/0:25,0:25:72.24:0,72,1035	0/0:27,0:27:78.26:0,78,1123	0/0:18,0:18:51.17:0,51,733	0/0:30,0:30:90.29:0,90,1265	0/0:27,0:27:75.23:0,75,1053	0/0:27,0:27:81.25:0,81,1131	0/0:19,0:19:54.18:0,54,772	0/0:20,0:20:57.19:0,57,820	0/0:19,0:19:39.13:0,39,556	0/0:32,0:32:93.30:0,93,1321	0/0:18,0:18:54.18:0,54,776	0/0:13,0:13:39.12:0,39,543	1/1:0,23:23:69.20:842,69,0	1/1:1,21:22:60.10:723,60,0	1/1:1,18:19:51.16:632,51,0	0/0:26,0:26:78.26:0,78,1121	0/0:33,0:33:92.98:0,93,1314	0/0:25,0:25:75.24:0,75,1062	0/0:20,0:20:57.19:0,57,820	0/0:32,0:32:96.32:0,96,1367	1/1:2,36:38:99:1338,108,0	0/0:7,0:7:21.07:0,21,302
chr10	46936410	.	T	TGAG	2888.82	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-9.559;DP=686;FS=13.541;HRun=0;HaplotypeScore=98.2991;InbreedingCoeff=0.9995;MQ=85.49;MQ0=0;MQRankSum=-2.935;QD=58.96;ReadPosRankSum=3.044;VQSLOD=5.1206;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:87.30:0,87,1421	1/1:0,21:21:63.22:1406,63,0	0/0:17,0:17:42.11:0,42,634	0/0:27,0:27:69.17:0,69,989	0/0:22,0:22:57.19:0,57,931	0/0:28,0:28:81.28:0,81,1323	0/0:29,0:29:87.28:0,87,1393	0/0:26,0:26:66.21:0,66,1055	0/0:30,0:30:90.31:0,90,1464	0/0:24,0:24:66.22:0,66,1057	0/0:31,0:31:84.25:0,84,1296	0/0:21,0:21:63.20:0,63,1005	0/0:22,0:22:66.23:0,66,1078	0/0:31,0:31:90.31:0,90,1467	1/1:5,23:28:72.25:1604,72,0	0/0:29,0:29:84.29:0,84,1371	0/0:22,0:22:60.16:0,60,928	0/0:13,0:13:36.12:0,36,588	0/0:22,0:22:63.19:0,63,983	0/0:29,0:29:84.29:0,84,1370	0/0:13,0:13:33.11:0,33,539	0/0:23,0:23:63.22:0,63,1029	0/0:28,0:28:78.24:0,78,1223	0/0:23,0:23:66.23:0,66,1077	0/0:20,0:20:60.19:0,60,951	0/0:35,0:35:99:0,102,1644	0/0:33,0:33:96.33:0,96,1566	0/0:10,0:10:30.09:0,30,465
chr10	46937406	.	TTA	T	5454.22	PASS	AC=44;AF=0.880;AN=50;BaseQRankSum=1.389;DP=299;FS=1.269;HRun=0;HaplotypeScore=40.5281;InbreedingCoeff=0.5708;MQ=67.79;MQ0=2;MQRankSum=0.647;QD=19.98;ReadPosRankSum=0.686;VQSLOD=4.1293;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,12:18:27.08:327,27,0	0/0:2,0:2:6.01:0,6,69	1/1:7,0:6:2.18:7,2,0	0/0:14,0:10:3.82:0,4,63	1/1:8,9:17:27.08:327,27,0	1/1:4,13:18:38.95:451,39,0	1/1:4,0:4:3:26,3,0	1/1:12,27:39:64.12:871,64,0	1/1:3,3:6:9.03:109,9,0	1/1:3,4:7:2.05:123,2,0	1/1:1,6:6:15:165,15,0	1/1:3,4:7:6.02:73,6,0	1/1:4,4:8:9.03:109,9,0	1/1:3,6:9:15.05:182,15,0	0/0:5,0:5:12.04:0,12,194	1/1:3,5:8:9.03:109,9,0	1/1:4,17:24:41.62:442,42,0	1/1:4,13:16:24.07:291,24,0	1/1:4,20:24:63.08:680,63,0	./.	1/1:4,2:6:3.01:36,3,0	./.	1/1:5,0:5:3:26,3,0	./.	1/1:4,8:12:24.07:291,24,0	1/1:1,6:7:18.05:207,18,0	1/1:4,9:14:29.85:309,30,0	1/1:0,9:9:24.07:291,24,0
chr10	46937739	.	TG	T	2217.35	PASS	AB=0.927;AC=34;AF=0.607;AN=56;BaseQRankSum=4.473;DP=362;FS=2.420;HRun=13;HaplotypeScore=84.4817;InbreedingCoeff=0.5223;MQ=82.10;MQ0=1;MQRankSum=-4.696;QD=7.73;ReadPosRankSum=5.973;VQSLOD=2.8236;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:7,2:10:9.48:23,0,9	0/0:3,0:2:2.04:0,2,6	0/1:19,0:17:8.21:8,0,65	0/0:13,1:14:7.94:0,8,109	1/1:4,8:12:19.80:113,20,0	1/1:16,0:16:0.85:2,1,0	0/1:12,1:13:2.60:6,0,3	1/1:10,9:19:25.22:126,25,0	0/0:11,0:11:5.38:0,5,17	1/1:3,13:16:40.08:230,40,0	1/1:6,7:13:20.51:131,21,0	0/0:6,0:6:7.62:0,8,41	0/0:5,0:6:8.89:0,9,51	1/1:5,23:28:65.06:359,65,0	1/1:11,4:15:11.87:87,12,0	1/1:3,21:24:61.37:364,61,0	1/1:2,25:27:67.13:395,67,0	1/1:3,4:7:11.59:64,12,0	1/1:8,0:8:0.53:22,1,0	0/0:4,0:4:2.04:0,2,6	0/0:8,0:8:2.94:0,3,18	1/1:4,0:5:0.46:0,0,0	0/0:5,0:5:2.74:0,3,12	0/0:17,0:17:10.84:0,11,60	1/1:5,10:15:31.94:189,32,0	1/1:7,9:15:25.80:139,26,0	0/1:16,1:17:4.23:4,0,61	1/1:2,5:7:20.51:125,21,0
chr10	46937750	.	G	GC	552.64	PASS	AB=0.972;AC=20;AF=0.357;AN=56;BaseQRankSum=5.128;DP=356;FS=0.511;HRun=0;HaplotypeScore=99.2150;InbreedingCoeff=0.5226;MQ=75.07;MQ0=1;MQRankSum=1.394;QD=2.82;ReadPosRankSum=3.021;VQSLOD=2.6454;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:14.13:0,14,80	0/0:3,0:2:5.86:0,6,34	0/0:13,0:11:16.30:0,16,159	0/0:14,0:13:27.31:0,27,251	0/1:10,0:10:9.39:9,0,13	0/0:14,0:14:5.47:0,5,25	0/0:16,0:16:5.73:0,6,44	1/1:19,1:20:18.12:103,18,0	0/0:8,0:8:15.97:0,16,67	0/1:18,1:19:3.89:52,0,4	1/1:11,0:11:10.38:31,10,0	0/0:13,0:13:15.75:0,16,99	0/0:11,0:11:20.37:0,20,110	0/1:27,0:27:25.35:77,0,25	0/0:15,0:15:35.80:0,36,282	1/1:21,0:21:24.32:100,24,0	1/1:25,0:25:31.55:124,32,0	1/1:5,0:5:4.04:18,4,0	0/0:13,0:13:28.52:0,29,175	0/0:2,0:2:5.31:0,5,26	0/0:9,0:9:20.07:0,20,122	0/0:4,0:4:2.87:0,3,15	0/1:2,0:2:0:0,0,0	0/1:16,0:16:1.28:1,0,29	1/1:15,2:17:16.12:105,16,0	0/1:13,2:14:6.83:75,0,7	0/0:13,0:13:10.86:0,11,111	1/1:8,0:8:8.32:37,8,0
chr10	46937751	.	G	GC	1410.22	PASS	AB=0.937;AC=33;AF=0.589;AN=56;BaseQRankSum=-0.458;DP=359;FS=5.477;HRun=0;HaplotypeScore=97.8146;InbreedingCoeff=0.3996;MQ=75.11;MQ0=1;MQRankSum=1.962;QD=5.51;ReadPosRankSum=3.820;VQSLOD=3.1096;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,1:14:20.15:154,20,0	0/0:2,0:1:1.82:0,2,5	0/0:12,0:11:17.76:0,18,145	0/0:14,0:13:32.68:0,33,245	0/1:11,0:11:2.15:2,0,10	0/0:14,0:14:5.50:0,5,26	0/0:16,0:16:4.12:0,4,26	0/0:19,0:19:22.56:0,23,74	1/1:8,0:8:13.35:130,13,0	0/1:22,0:22:29.92:30,0,30	0/0:11,0:11:1.52:0,2,17	1/1:13,0:13:25.87:192,26,0	1/1:11,0:11:12.16:96,12,0	0/1:27,0:27:9.04:64,0,9	0/0:14,0:14:35.63:0,36,274	1/1:21,0:21:26.52:82,27,0	1/1:25,0:25:27.98:87,28,0	1/1:5,0:5:0.81:3,1,0	1/1:1,12:13:31.87:208,32,0	1/1:2,0:2:5.98:57,6,0	1/1:10,0:10:20.63:131,21,0	1/1:4,0:4:2.84:14,3,0	1/1:1,1:2:3.01:32,3,0	0/1:3,12:15:5.22:97,0,5	0/1:17,0:17:6.01:10,0,6	0/1:16,0:15:2.39:2,0,6	1/1:8,4:12:1.83:164,2,0	0/1:8,0:8:2.11:28,0,2
chr10	46937753	.	C	CG	2950.58	PASS	AB=0.949;AC=27;AF=0.482;AN=56;BaseQRankSum=9.200;DP=370;FS=14.204;HRun=13;HaplotypeScore=91.0346;InbreedingCoeff=0.6862;MQ=71.50;MQ0=1;MQRankSum=-5.456;QD=12.88;ReadPosRankSum=7.567;VQSLOD=1.8152;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:29.92:0,30,283	0/0:2,0:1:0:0,0,0	0/1:9,1:9:20.30:20,0,194	0/0:13,0:12:31.82:0,32,313	1/1:12,0:12:20.12:112,20,0	0/0:15,0:15:5.17:0,5,20	0/0:14,0:14:4.38:0,4,16	1/1:11,11:22:51.61:534,52,0	0/0:9,0:9:16.91:0,17,124	1/1:24,0:24:30.99:285,31,0	1/1:11,0:11:20.46:120,20,0	0/0:15,0:15:32.02:0,32,289	0/0:11,0:11:29.67:0,30,277	1/1:26,0:26:47.23:399,47,0	0/0:15,0:15:36.07:0,36,416	1/1:23,0:23:51.73:356,52,0	1/1:25,0:25:54.32:384,54,0	1/1:5,0:5:14.46:99,14,0	0/0:15,0:15:37:0,37,369	0/0:3,0:3:5.68:0,6,38	0/0:9,0:9:19.26:0,19,170	0/0:7,0:7:3:0,3,28	1/1:2,0:2:2.99:23,3,0	0/1:14,0:14:9.07:9,0,29	1/1:16,0:16:46.15:380,46,0	1/1:18,0:17:33.10:301,33,0	0/1:12,0:12:3.70:4,0,136	1/1:8,0:8:20.89:128,21,0
chr10	46937755	.	CGA	C	7328.11	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=9.996;DP=395;FS=6.982;HRun=0;HaplotypeScore=81.4275;InbreedingCoeff=0.9294;MQ=73.11;MQ0=1;MQRankSum=-5.266;QD=32.57;ReadPosRankSum=7.059;VQSLOD=6.6574;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:38.78:0,39,492	0/0:2,0:1:2.99:0,3,24	0/0:11,0:10:25.44:0,25,309	0/0:14,0:13:16.26:0,16,411	1/1:1,11:12:24.08:322,24,0	1/1:0,16:17:6.02:78,6,0	1/1:0,14:14:5.82:83,6,0	1/1:15,9:24:72.17:940,72,0	0/0:11,0:11:30.04:0,30,395	1/1:2,21:23:63.07:750,63,0	1/1:0,12:12:24.07:311,24,0	0/0:17,0:17:44.83:0,45,585	0/0:13,0:13:36.09:0,36,479	1/1:5,21:26:75.23:1002,75,0	0/0:15,0:15:39.06:0,39,540	1/1:4,19:23:66.21:950,66,0	1/1:3,22:25:69.22:988,69,0	1/1:2,4:6:18.02:235,18,0	0/0:19,0:19:50.35:0,50,657	0/0:5,0:5:14.98:0,15,161	0/0:9,0:9:24.02:0,24,307	0/0:7,0:7:14.99:0,15,130	0/0:5,0:5:12:0,12,116	0/0:14,0:14:12.04:0,12,185	1/1:4,13:17:51.16:708,51,0	1/1:0,19:18:51.08:664,51,0	0/0:14,0:14:32.70:0,33,430	1/1:0,7:7:21.07:299,21,0
chr10	46938665	.	CT	C	594.38	PASS	AB=0.933;AC=5;AF=0.089;AN=56;BaseQRankSum=6.550;DP=648;FS=3.167;HRun=9;HaplotypeScore=66.1131;InbreedingCoeff=0.8203;MQ=70.75;MQ0=1;MQRankSum=0.743;QD=10.25;ReadPosRankSum=0.422;VQSLOD=2.4018;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:81.21:0,81,913	1/1:0,8:8:24.01:220,24,0	0/0:21,0:18:23.22:0,23,264	0/1:26,2:22:4.57:5,0,218	0/0:41,0:41:99:0,104,1149	0/0:20,1:21:26.68:0,27,551	0/0:13,0:13:36.08:0,36,396	0/0:28,0:28:63.14:0,63,685	0/0:19,0:19:48.11:0,48,525	0/0:29,0:29:51.09:0,51,562	0/0:23,0:23:60.18:0,60,692	0/0:24,0:24:60.14:0,60,664	0/0:20,0:20:57.02:0,57,590	0/0:24,0:24:66.19:0,66,759	1/1:3,19:22:54.02:494,54,0	0/0:30,0:30:78.19:0,78,863	0/0:30,1:30:50.10:0,50,790	0/0:19,0:19:44.19:0,44,536	0/0:14,0:14:27.06:0,27,293	0/0:28,1:29:53.72:0,54,824	0/0:16,0:16:33.10:0,33,381	0/0:20,0:20:49.38:0,49,545	0/0:19,0:19:54.11:0,54,589	0/0:21,0:21:57.15:0,57,647	0/0:30,0:30:84.23:0,84,949	0/0:33,0:33:69.20:0,69,789	0/0:29,0:29:81.21:0,81,912	0/0:7,0:7:15.04:0,15,173
chr10	46941018	.	GACACACACACAC	G	1634.08	PASS	AC=26;AF=0.684;AN=38;BaseQRankSum=3.583;DP=422;FS=0.000;HRun=0;HaplotypeScore=147.7792;InbreedingCoeff=0.5266;MQ=61.05;MQ0=16;MQRankSum=-5.055;QD=8.42;ReadPosRankSum=-0.354;VQSLOD=2.4479;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:7,0:7:6:0,6,91	./.	./.	1/1:22,1:24:6.02:128,6,0	0/0:16,0:15:21.07:0,21,986	0/0:20,0:20:9.90:0,10,199	0/0:20,0:20:0:0,0,0	1/1:12,0:11:3.01:84,3,0	./.	1/1:18,2:19:6.02:204,6,0	1/1:7,0:8:6.02:151,6,0	./.	1/1:5,2:7:3.01:102,3,0	0/0:8,0:8:6.02:0,6,242	1/1:8,0:13:11.91:214,12,0	1/1:17,2:18:9.03:305,9,0	0/0:18,1:18:6.49:0,6,120	./.	./.	./.	1/1:16,0:14:0.47:1,0,0	1/1:10,0:10:3.01:84,3,0	./.	1/1:17,2:19:6.02:204,6,0	1/1:13,3:14:5.96:122,6,0	1/1:10,0:14:2.89:83,3,0	1/1:11,0:10:3.01:84,3,0
chr10	46941081	.	G	GTT	2850.51	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-2.157;DP=519;FS=4.408;HRun=9;HaplotypeScore=96.9052;InbreedingCoeff=0.9528;MQ=59.45;MQ0=40;MQRankSum=0.630;QD=27.41;ReadPosRankSum=-2.526;VQSLOD=3.2350;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,18:21:45.11:653,45,0	0/0:8,0:8:17.93:0,18,190	0/0:49,0:18:13.56:0,14,266	0/0:47,0:12:7.30:0,7,186	0/0:20,0:21:47.80:0,48,480	0/0:18,0:17:42.06:0,42,436	0/0:19,0:18:41.50:0,41,444	0/0:17,0:16:32.67:0,33,350	1/1:2,12:15:28.09:356,28,0	0/0:13,0:13:27.06:0,27,287	0/0:10,0:10:26.96:0,27,271	1/1:3,10:13:36.05:508,36,0	1/1:0,7:7:15.05:231,15,0	0/0:7,0:7:4.92:0,5,62	0/0:19,0:19:48.05:0,48,493	0/0:24,0:21:47.98:0,48,498	0/0:22,0:19:28.80:0,29,488	0/0:21,0:19:42.85:0,43,448	0/0:19,0:18:39.05:0,39,400	0/0:20,0:20:44.96:0,45,458	0/0:15,0:14:24.01:0,24,255	1/1:2,12:14:30.83:427,31,0	1/1:1,14:16:35.99:458,36,0	1/1:2,11:10:27.09:416,27,0	0/0:19,0:17:45.10:0,45,479	0/0:12,0:12:27.04:0,27,283	0/0:19,0:18:48.02:0,48,511	0/0:13,0:12:36.09:0,36,383
chr10	46941207	.	T	TAC	1675.32	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.519;DP=606;FS=1.445;HRun=0;HaplotypeScore=70.6665;InbreedingCoeff=0.8789;MQ=85.21;MQ0=0;MQRankSum=-1.693;QD=46.54;ReadPosRankSum=-0.873;VQSLOD=4.5156;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,108,1590	1/1:0,10:10:27.09:505,27,0	0/0:19,0:19:51.17:0,51,727	0/0:20,0:20:51.08:0,51,677	0/0:25,0:25:63.20:0,63,906	0/0:24,0:24:69.22:0,69,996	0/0:20,0:20:57.19:0,57,839	0/0:34,0:34:96.32:0,96,1412	0/0:20,0:20:57.16:0,57,801	0/0:29,0:29:81.27:0,81,1192	0/0:23,0:23:66.21:0,66,950	0/0:14,0:14:39.12:0,39,557	0/0:16,0:16:45.14:0,45,643	0/0:19,0:19:48.16:0,48,706	1/1:1,25:26:69.24:1291,69,0	0/0:22,0:22:63.21:0,63,928	0/0:24,0:24:72.24:0,72,1060	0/0:17,0:17:48.16:0,48,707	0/0:10,0:10:0.07:0,0,285	0/0:28,0:28:81.26:0,81,1172	0/0:35,0:35:99:0,102,1480	0/0:18,0:18:45.15:0,45,661	0/0:16,0:16:45.15:0,45,662	0/0:17,0:17:51.17:0,51,749	0/0:11,0:11:27.09:0,27,398	0/0:30,0:30:90.29:0,90,1290	0/0:31,0:31:90.25:0,90,1247	0/0:11,0:11:33.11:0,33,486
chr10	46945217	.	TAC	T	2531.20	PASS	AB=0.919;AC=22;AF=0.407;AN=54;BaseQRankSum=-1.986;DP=721;FS=3.439;HRun=0;HaplotypeScore=135.2030;InbreedingCoeff=0.7555;MQ=57.85;MQ0=8;MQRankSum=2.876;QD=8.38;ReadPosRankSum=2.389;VQSLOD=3.4847;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:33:0.47:0,0,1	./.	0/0:28,0:14:9.03:0,9,120	0/1:45,0:20:0.01:0,0,0	1/1:11,11:22:11.84:134,12,0	0/0:9,0:12:5.56:0,6,57	0/0:28,0:41:11.49:0,11,88	1/1:20,6:26:12.01:123,12,0	0/0:13,0:25:17.78:0,18,153	1/1:7,14:22:32.75:329,33,0	1/1:4,6:10:14.88:167,15,0	0/0:19,0:35:27.01:0,27,269	0/0:14,0:23:18.04:0,18,143	1/1:10,12:23:28.95:289,29,0	0/0:29,0:30:2.04:0,2,6	1/1:12,14:31:41.24:358,41,0	1/1:14,22:38:30.55:526,31,0	0/1:21,5:26:73.84:74,0,650	0/0:12,0:14:9.01:0,9,93	0/0:10,0:20:16.59:0,17,102	0/0:44,0:43:36.02:0,36,369	0/0:19,0:29:4.54:0,5,31	0/0:15,0:15:5.80:0,6,79	0/0:24,0:44:27.47:0,27,274	1/1:6,7:14:23.90:249,24,0	1/1:25,11:37:35.59:368,36,0	0/0:10,0:16:19.87:0,20,222	1/1:4,4:8:11.70:112,12,0
chr10	46945232	.	A	ACA	1036.66	PASS	AB=1.000;AC=24;AF=0.462;AN=52;BaseQRankSum=0.381;DP=772;FS=0.000;HRun=0;HaplotypeScore=143.6094;InbreedingCoeff=0.6414;MQ=54.36;MQ0=15;MQRankSum=-3.501;QD=2.79;ReadPosRankSum=-2.245;VQSLOD=2.3316;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:37,0:36:0.89:2,1,0	./.	./.	0/0:50,0:15:2.98:0,3,21	0/0:33,0:33:11.23:0,11,56	0/1:16,0:16:1.16:1,0,28	1/1:42,0:42:8.27:64,8,0	0/0:25,0:25:7.50:0,7,34	1/1:27,0:27:15.47:149,15,0	0/0:30,0:30:30.63:0,31,147	0/0:13,0:13:14.20:0,14,70	1/1:30,0:30:17.91:193,18,0	1/1:20,0:20:14.52:138,15,0	0/0:26,0:26:26.04:0,26,126	1/1:31,0:31:2.24:10,2,0	0/0:29,0:29:36.80:0,37,182	0/0:39,0:39:6.03:0,6,193	0/0:29,0:29:53.47:0,53,521	1/1:12,0:11:6.48:73,6,0	1/1:23,0:22:3.38:70,3,0	1/1:46,0:44:27:260,27,0	1/1:28,0:28:2.74:26,3,0	0/0:12,4:17:2.96:0,3,24	0/1:44,0:44:12.46:134,0,12	0/0:20,0:20:22.73:0,23,112	0/0:37,0:37:28.36:0,28,142	1/1:16,0:16:8.90:97,9,0	0/0:6,0:6:11.42:0,11,58
chr10	46945894	.	GA	G	8289.66	PASS	AB=1.000;AC=54;AF=0.964;AN=56;BaseQRankSum=-4.101;DP=560;FS=20.073;HRun=11;HaplotypeScore=64.4395;InbreedingCoeff=0.1352;MQ=64.55;MQ0=13;MQRankSum=0.769;QD=14.80;ReadPosRankSum=4.350;VQSLOD=3.5990;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,35:41:67.07:594,67,0	1/1:1,7:8:22.20:172,22,0	0/1:22,0:10:5.77:6,0,69	0/1:21,0:11:19.15:19,0,25	1/1:7,21:28:44.88:367,45,0	1/1:1,16:17:26.97:222,27,0	1/1:0,20:20:56.94:468,57,0	1/1:9,20:29:35.81:440,36,0	1/1:2,15:17:26.95:218,27,0	1/1:5,20:24:61.47:496,61,0	1/1:3,9:12:20.89:191,21,0	1/1:1,16:17:32.85:270,33,0	1/1:0,12:12:23.97:197,24,0	1/1:3,8:11:23.96:196,24,0	1/1:3,22:26:52.84:424,53,0	1/1:2,19:21:47.94:394,48,0	1/1:4,15:19:38.55:306,39,0	1/1:24,0:24:24.19:253,24,0	1/1:6,14:18:9.95:288,10,0	1/1:6,19:25:32.01:447,32,0	1/1:0,15:15:38.96:320,39,0	1/1:2,11:12:35.16:273,35,0	1/1:2,13:16:25.98:203,26,0	1/1:3,12:15:26.94:222,27,0	1/1:6,15:19:23.96:197,24,0	1/1:4,24:28:73.73:595,74,0	1/1:3,22:25:6.87:364,7,0	1/1:4,7:11:17.95:148,18,0
chr10	46946165	.	AT	A	2604.98	PASS	AB=0.718;AC=43;AF=0.768;AN=56;BaseQRankSum=1.395;DP=509;FS=5.922;HRun=16;HaplotypeScore=59.1649;InbreedingCoeff=-0.0176;MQ=67.85;MQ0=6;MQRankSum=1.404;QD=5.47;ReadPosRankSum=5.358;VQSLOD=2.2420;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:10,3:36:45.26:159,45,0	1/1:1,2:3:2.86:15,3,0	0/0:24,0:12:14.40:0,14,87	0/0:9,0:3:2.90:0,3,16	0/1:9,15:26:8.08:154,0,8	0/1:11,18:29:44.11:213,0,44	0/1:11,10:22:52.78:112,0,53	0/1:10,12:21:11.77:125,0,12	1/1:3,1:14:19.21:65,19,0	1/1:8,10:18:4.12:134,4,0	1/1:4,2:8:9.22:59,9,0	1/1:7,0:22:28.41:82,28,0	1/1:6,1:12:11.01:41,11,0	0/1:10,2:13:22.97:86,0,23	1/1:9,17:27:42.90:257,43,0	1/1:9,11:20:4.07:136,4,0	0/1:13,8:23:18.11:107,0,18	1/1:5,12:17:29.25:179,29,0	0/1:12,4:16:47.04:47,0,49	0/1:12,3:16:33.69:44,0,34	1/1:6,4:10:14.66:89,15,0	1/1:3,0:9:8.08:23,8,0	1/1:6,0:16:16.20:47,16,0	1/1:12,2:25:33.27:124,33,0	1/1:7,7:14:17.51:108,18,0	1/1:14,8:23:7.41:142,7,0	1/1:10,13:23:11.20:185,11,0	0/1:7,2:9:16.46:27,0,16
chr10	46946644	.	AT	A	4968.10	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=14.738;DP=707;FS=15.365;HRun=2;HaplotypeScore=129.2094;InbreedingCoeff=0.9991;MQ=88.39;MQ0=0;MQRankSum=-14.397;QD=30.67;ReadPosRankSum=-1.341;VQSLOD=2.8184;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,31:35:90.21:1127,90,0	0/0:14,0:14:42.14:0,42,618	0/0:32,0:32:96.31:0,96,1383	0/0:24,0:24:72.20:0,72,978	0/0:33,0:33:99:0,99,1435	0/0:22,0:22:54.18:0,54,809	0/0:26,0:26:72.21:0,72,1035	0/0:28,0:28:78.25:0,78,1135	1/1:1,22:23:21.24:756,21,0	0/0:49,0:49:99:0,147,2180	0/0:21,0:21:57.18:0,57,835	1/1:1,18:19:54.17:689,54,0	1/1:1,22:22:66.20:834,66,0	0/0:30,0:30:90.29:0,90,1329	0/0:25,0:25:72.24:0,72,1079	0/0:22,0:22:60.19:0,60,877	0/0:21,0:21:57.19:0,57,854	0/0:21,0:21:60.17:0,60,875	0/0:24,0:24:72.24:0,72,1061	0/0:27,0:27:78.22:0,78,1142	0/0:34,0:34:99:0,99,1466	1/1:1,25:26:60.18:749,60,0	1/1:0,17:17:33.11:424,33,0	1/1:3,16:18:33:389,33,0	0/0:20,0:20:60.20:0,60,899	0/0:27,0:27:78.26:0,78,1169	0/0:33,0:33:90.26:0,90,1322	0/0:12,0:12:33.11:0,33,495
chr10	46946651	.	CTATCA	C	6882.85	PASS	AB=0.548;AC=13;AF=0.232;AN=56;BaseQRankSum=15.881;DP=700;FS=11.332;HRun=0;HaplotypeScore=178.9410;InbreedingCoeff=0.8986;MQ=89.71;MQ0=0;MQRankSum=-15.597;QD=45.58;ReadPosRankSum=0.265;VQSLOD=4.1764;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,25:32:77.47:1601,77,0	0/0:14,0:14:39.13:0,39,1168	0/0:34,0:34:96.31:0,96,2697	0/0:24,0:24:65.25:0,65,1803	0/0:35,0:35:99:0,105,3207	0/0:23,0:23:60.21:0,60,1860	0/0:23,0:23:60.21:0,60,1903	0/0:25,0:25:72.25:0,72,2212	0/1:4,19:23:31.94:1182,0,32	0/0:51,0:51:99:0,154,4731	0/0:23,0:23:60.21:0,60,1896	1/1:1,17:18:51.11:1036,51,0	1/1:3,18:20:57.20:1182,57,0	0/0:29,0:29:87.30:0,87,2668	0/0:27,0:27:72.25:0,72,2243	0/0:22,0:22:63.22:0,63,1992	0/0:23,0:23:63.22:0,63,1908	0/0:21,0:21:60.21:0,60,1856	0/0:24,0:24:60.19:0,60,1748	0/0:25,0:25:72.25:0,72,2282	0/0:32,0:32:96.33:0,96,2947	1/1:4,21:25:51.10:1003,51,0	1/1:2,14:16:21.03:407,21,0	1/1:4,12:16:23.97:473,24,0	0/0:21,0:21:63.20:0,63,1928	0/0:28,0:28:81.28:0,81,2536	0/0:33,0:33:87.28:0,87,2684	0/0:12,0:12:33.11:0,33,1047
chr10	46946697	.	A	AT	15679.29	PASS	AB=0.588;AC=51;AF=0.911;AN=56;BaseQRankSum=-6.663;DP=677;FS=3.140;HRun=9;HaplotypeScore=99.3154;InbreedingCoeff=0.6925;MQ=72.12;MQ0=0;MQRankSum=-6.275;QD=24.77;ReadPosRankSum=4.295;VQSLOD=4.7507;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,36:41:96.13:1026,96,0	1/1:1,8:9:20.86:232,21,0	0/0:25,0:23:6.30:0,6,234	0/0:19,0:18:38.45:0,38,316	1/1:4,26:31:80.99:861,81,0	1/1:3,19:22:25.08:505,25,0	1/1:2,18:20:48.13:531,48,0	1/1:7,29:36:84.66:910,85,0	1/1:2,20:22:34.08:589,34,0	1/1:8,40:48:99:1312,120,0	1/1:4,21:25:66.17:719,66,0	1/1:3,21:24:63.17:696,63,0	1/1:3,16:19:42.11:464,42,0	1/1:6,25:31:72.19:797,72,0	1/1:4,12:16:33.09:365,33,0	1/1:3,25:28:49.15:770,49,0	1/1:6,25:31:24.18:714,24,0	1/1:7,9:16:4.03:273,4,0	1/1:7,13:21:12.89:398,13,0	1/1:3,21:24:31:543,31,0	1/1:5,14:19:39.11:431,39,0	0/1:6,14:20:4.92:370,0,5	1/1:3,22:25:57.29:598,57,0	1/1:3,14:17:36.06:384,36,0	1/1:3,19:22:57.15:631,57,0	1/1:2,26:28:52.86:796,53,0	1/1:4,25:29:60.16:664,60,0	1/1:5,4:9:9.02:100,9,0
chr10	46949838	.	T	TA	9469.93	PASS	AB=0.744;AC=47;AF=0.839;AN=56;BaseQRankSum=-6.940;DP=509;FS=0.000;HRun=11;HaplotypeScore=50.5642;InbreedingCoeff=0.3413;MQ=72.89;MQ0=0;MQRankSum=-2.772;QD=19.29;ReadPosRankSum=2.600;VQSLOD=5.7303;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,23:27:59.92:579,60,0	0/0:5,0:5:14.94:0,15,115	0/1:16,1:16:12.92:13,0,55	0/1:6,0:6:0.83:1,0,18	1/1:4,14:19:47.83:446,48,0	1/1:2,11:14:18.91:220,19,0	1/1:1,6:7:15.03:152,15,0	1/1:7,18:25:51.03:488,51,0	1/1:2,10:12:24.05:244,24,0	1/1:6,27:33:54.93:729,55,0	1/1:3,19:22:44.78:482,45,0	1/1:4,18:22:6.82:413,7,0	0/1:4,9:13:16.37:213,0,16	1/1:2,16:19:15.67:326,16,0	0/0:12,1:13:2.42:0,2,200	0/1:6,15:23:19.88:371,0,20	1/1:5,25:30:63.09:639,63,0	1/1:4,19:23:44.92:437,45,0	1/1:5,12:19:44.51:388,45,0	1/1:5,10:16:38.38:348,38,0	1/1:5,11:16:33.05:328,33,0	1/1:5,9:14:4.78:248,5,0	1/1:1,12:12:33.06:335,33,0	1/1:1,4:5:12.02:122,12,0	1/1:4,20:24:39.89:586,40,0	0/1:7,18:26:3.75:497,0,4	1/1:7,25:32:63.07:622,63,0	1/1:0,12:13:24.05:243,24,0
chr10	46951778	.	CAA	C	3779.33	PASS	AB=0.564;AC=31;AF=0.554;AN=56;BaseQRankSum=-12.954;DP=453;FS=1.992;HRun=14;HaplotypeScore=79.8944;InbreedingCoeff=0.6396;MQ=73.54;MQ0=0;MQRankSum=0.331;QD=13.21;ReadPosRankSum=2.829;VQSLOD=2.9972;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,19:26:41.71:482,42,0	1/1:1,3:4:8.99:83,9,0	0/0:14,0:9:7.49:0,7,108	0/0:12,0:10:12.03:0,12,141	0/0:5,0:22:28.16:0,28,117	0/0:9,0:17:21.03:0,21,206	0/0:1,0:6:6.01:0,6,57	0/1:9,1:30:1.73:2,0,140	1/1:1,10:12:23.87:269,24,0	0/1:4,1:13:29.56:30,0,43	0/1:3,2:14:28.58:29,0,64	1/1:1,13:16:38.51:329,39,0	1/1:1,7:8:15.01:139,15,0	0/0:2,0:10:14.79:0,15,52	1/1:2,29:32:77.80:706,78,0	0/0:6,0:18:17.47:0,17,61	0/0:11,1:34:31.64:0,32,226	0/0:7,0:12:26.98:0,27,199	1/1:5,6:11:19.77:163,20,0	1/1:2,11:15:23.54:253,24,0	1/1:1,9:11:29.76:262,30,0	1/1:0,8:8:24.03:222,24,0	1/1:2,8:11:23.73:206,24,0	1/1:3,9:11:21.01:194,21,0	0/0:7,0:20:44.87:0,45,314	0/1:5,2:24:6.42:6,0,115	1/1:7,17:26:38.58:392,39,0	0/1:1,1:11:11.91:12,0,61
chr10	46953031	.	T	TC	5743.05	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-9.742;DP=581;FS=7.601;HRun=8;HaplotypeScore=56.9449;InbreedingCoeff=0.9633;MQ=86.58;MQ0=0;MQRankSum=-0.268;QD=23.73;ReadPosRankSum=-0.873;VQSLOD=5.1048;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,144,1317	0/0:12,0:12:32.99:0,33,295	0/0:23,0:22:47.69:0,48,431	0/0:19,0:19:32.89:0,33,284	1/1:7,12:20:30.64:307,31,0	1/1:1,13:14:36.11:415,36,0	1/1:1,19:20:51.15:588,51,0	1/1:10,8:18:18.03:196,18,0	0/0:19,0:19:54.02:0,54,494	1/1:5,16:21:26.78:547,27,0	1/1:6,12:18:24.07:277,24,0	0/0:23,0:23:57:0,57,515	0/0:18,0:18:45.02:0,45,412	1/1:2,16:18:45.13:517,45,0	0/0:26,0:26:72.04:0,72,659	1/1:2,28:30:81.20:916,81,0	1/1:2,20:22:48.14:554,48,0	1/1:1,7:8:21.06:242,21,0	0/0:19,0:19:48.02:0,48,439	0/0:24,0:24:63.01:0,63,571	0/0:25,0:25:63.01:0,63,571	0/0:13,0:13:1.41:0,1,267	0/0:14,0:14:30.01:0,30,274	0/0:24,0:24:66.03:0,66,603	1/1:3,13:16:30.09:346,30,0	1/1:7,23:30:38.73:699,39,0	0/0:25,0:25:72.02:0,72,654	1/1:3,4:7:12.04:138,12,0
chr10	46955422	.	CTG	C	9802.12	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=14.920;DP=697;FS=7.327;HRun=0;HaplotypeScore=89.7967;InbreedingCoeff=0.9944;MQ=80.78;MQ0=3;MQRankSum=0.533;QD=37.27;ReadPosRankSum=0.820;VQSLOD=6.9797;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:93.32:0,93,1703	0/0:8,0:8:18.06:0,18,330	0/0:26,0:26:66.20:0,66,1144	0/0:12,0:12:30.10:0,30,538	1/1:0,24:24:60.12:813,60,0	0/0:30,0:30:90.27:0,90,1585	0/0:19,0:19:48.16:0,48,880	1/1:1,32:33:96.29:1345,96,0	0/0:33,0:33:99:0,99,1775	1/1:1,22:23:69.21:963,69,0	1/1:0,28:28:72.20:1008,72,0	0/0:34,0:34:99:0,99,1781	0/0:24,0:24:66.23:0,66,1206	1/1:0,17:16:42.14:600,42,0	0/0:32,0:32:90.29:0,90,1618	1/1:1,28:29:75.25:1074,75,0	1/1:1,25:25:69.23:989,69,0	1/1:2,27:29:75.25:1075,75,0	0/0:16,0:16:42.13:0,42,726	0/0:34,0:34:99:0,99,1798	0/0:40,0:40:99:0,111,2026	0/0:19,0:19:57.20:0,57,1045	0/0:23,0:23:63.22:0,63,1137	0/0:30,0:30:78.27:0,78,1426	1/1:2,18:20:48.16:688,48,0	1/1:2,28:29:75.25:1075,75,0	0/0:20,0:20:60.21:0,60,1089	1/1:0,4:4:12.04:172,12,0
chr10	46955512	.	CA	C	11123.90	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-0.527;DP=583;FS=2.341;HRun=9;HaplotypeScore=120.8008;InbreedingCoeff=0.9625;MQ=71.95;MQ0=4;MQRankSum=-5.011;QD=22.07;ReadPosRankSum=6.223;VQSLOD=3.6936;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,24:27:69.03:631,69,0	1/1:0,8:8:18.01:165,18,0	0/0:17,0:15:33.04:0,33,353	0/0:24,0:21:21.07:0,21,301	1/1:2,22:24:63.03:574,63,0	0/0:24,0:24:63.12:0,63,699	0/0:14,0:14:42.08:0,42,470	1/1:4,22:26:65.99:593,66,0	1/1:1,19:20:57.03:521,57,0	1/1:5,16:21:48.02:439,48,0	1/1:4,14:17:39.01:357,39,0	1/1:3,26:29:69.04:631,69,0	1/1:2,26:28:78.04:714,78,0	1/1:5,15:19:48.02:437,48,0	1/1:2,26:28:75.04:686,75,0	1/1:3,21:24:57.02:522,57,0	1/1:7,18:24:42.09:479,42,0	1/1:7,10:17:14.46:256,14,0	1/1:7,17:24:54.01:488,54,0	1/1:2,21:23:63.02:576,63,0	1/1:3,12:15:36:325,36,0	1/1:4,15:19:45.02:412,45,0	1/1:7,10:17:8.40:241,8,0	1/1:4,8:12:10.74:155,11,0	1/1:2,18:20:54.03:494,54,0	1/1:5,18:21:54.03:494,54,0	1/1:3,22:25:69.03:631,69,0	1/1:0,11:11:33.02:302,33,0
chr10	46955537	.	A	AAAAAC	24139.70	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-4.806;DP=621;FS=1.880;HRun=0;HaplotypeScore=149.9388;InbreedingCoeff=0.8953;MQ=68.99;MQ0=1;MQRankSum=-6.999;QD=46.16;ReadPosRankSum=1.903;VQSLOD=4.8882;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:13,12:25:37.28:964,37,0	0/0:8,0:8:24.08:0,24,424	0/0:28,0:21:3.89:0,4,272	0/0:28,0:24:15.61:0,16,402	1/1:12,10:22:48.15:1124,48,0	1/1:8,19:27:57.20:1599,57,0	1/1:8,8:16:24.08:687,24,0	1/1:29,9:38:57.17:1320,57,0	1/1:10,15:26:6.94:1501,7,0	1/1:13,12:25:48.16:1354,48,0	1/1:9,4:12:12.04:311,12,0	1/1:15,9:24:38.96:1041,39,0	1/1:15,11:26:48.08:1240,48,0	1/1:11,9:20:42.13:1116,42,0	0/0:34,0:34:75.24:0,75,1353	1/1:14,17:31:60.19:1603,60,0	1/1:15,12:27:48.15:1239,48,0	1/1:10,4:14:24.08:656,24,0	1/1:17,11:28:36.08:966,36,0	1/1:15,11:26:42.14:1125,42,0	1/1:12,5:17:24:590,24,0	1/1:11,7:18:33.11:829,33,0	1/1:3,9:13:27.08:660,27,0	1/1:5,8:13:8.28:196,8,0	1/1:9,9:18:27.09:747,27,0	1/1:6,16:22:57.18:1534,57,0	1/1:13,13:26:51.18:1395,51,0	1/1:5,1:6:15.03:343,15,0
chr10	46955817	.	A	ATTTTTATT	9620.85	PASS	AB=0.672;AC=40;AF=0.741;AN=54;BaseQRankSum=-3.989;DP=365;FS=9.059;HRun=0;HaplotypeScore=73.4854;InbreedingCoeff=0.2811;MQ=56.84;MQ0=22;MQRankSum=-5.854;QD=33.52;ReadPosRankSum=1.132;VQSLOD=3.6760;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,0:21:27.07:778,27,0	0/0:1,0:4:5.95:0,6,67	0/0:33,0:9:9.01:0,9,95	0/0:16,0:6:3.34:0,3,30	0/1:9,1:20:7.59:298,0,8	1/1:0,0:17:24.08:755,24,0	0/1:7,0:6:2.72:111,0,3	1/1:4,1:27:39.47:1423,39,0	1/1:2,2:3:5.97:142,6,0	1/1:2,0:17:16.13:563,16,0	0/1:2,0:15:13.74:467,0,14	1/1:2,2:8:6.01:247,6,0	1/1:2,4:8:9.02:298,9,0	0/1:6,0:7:11.01:127,0,11	0/0:9,0:22:33.64:0,34,682	1/1:2,1:9:15.05:442,15,0	1/1:6,3:14:12.03:307,12,0	1/1:0,2:10:6.02:190,6,0	0/1:6,14:23:1.89:1245,0,2	0/1:1,5:10:15.52:357,0,16	1/1:0,0:1:3.01:40,3,0	1/1:1,0:3:8.94:101,9,0	1/1:6,0:7:17.46:189,17,0	./.	1/1:3,1:14:9.03:288,9,0	1/1:0,0:13:6.49:644,6,0	1/1:1,2:10:15.05:513,15,0	1/1:5,0:7:3:96,3,0
chr10	46956870	.	AT	A	843.17	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.153;DP=522;FS=0.685;HRun=6;HaplotypeScore=50.3439;InbreedingCoeff=0.9473;MQ=81.78;MQ0=0;MQRankSum=-3.137;QD=26.35;ReadPosRankSum=1.990;VQSLOD=3.8852;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:93.30:0,93,1222	1/1:0,6:6:15.04:161,15,0	0/0:15,0:15:42.08:0,42,493	0/0:15,0:15:7.31:0,7,257	0/0:9,0:9:24.08:0,24,316	0/0:24,0:24:69.22:0,69,907	0/0:15,0:15:45.15:0,45,585	0/0:24,0:24:72.22:0,72,921	0/0:24,0:24:66.21:0,66,867	0/0:19,0:19:54.17:0,54,701	0/0:11,0:11:27.09:0,27,355	0/0:28,0:28:84.27:0,84,1103	0/0:21,0:21:60.19:0,60,777	0/0:18,0:18:51.16:0,51,663	1/1:0,26:26:75.18:800,75,0	0/0:23,0:22:69.21:0,69,890	0/0:22,0:21:60.20:0,60,790	0/0:8,0:8:24.06:0,24,300	0/0:24,0:24:72.23:0,72,933	0/0:27,0:27:78.20:0,78,994	0/0:23,0:23:69.21:0,69,893	0/0:8,0:8:24.08:0,24,316	0/0:16,0:16:42.12:0,42,538	0/0:12,0:12:36.12:0,36,466	0/0:11,0:11:33.11:0,33,434	0/0:22,0:22:63.20:0,63,828	0/0:29,0:29:84.27:0,84,1104	0/0:11,0:11:33.11:0,33,434
chr10	46958101	.	G	GA	12155.92	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-7.217;DP=343;FS=12.585;HRun=1;HaplotypeScore=33.3720;InbreedingCoeff=0.7697;MQ=89.33;MQ0=0;MQRankSum=-8.078;QD=38.84;ReadPosRankSum=4.206;VQSLOD=3.6098;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,35:38:84.28:1259,84,0	1/1:0,5:5:12.04:180,12,0	0/0:13,0:13:23.10:0,23,319	0/0:17,0:17:42.01:0,42,480	1/1:0,8:8:21.07:315,21,0	1/1:0,6:6:15.05:225,15,0	1/1:0,25:25:69.23:1034,69,0	1/1:0,8:8:21.05:278,21,0	1/1:1,14:15:33.11:494,33,0	1/1:0,11:11:33.10:470,33,0	1/1:0,4:4:9.03:135,9,0	1/1:0,9:9:21.07:315,21,0	1/1:0,12:12:33.11:495,33,0	1/1:0,7:7:15.05:225,15,0	1/1:0,2:2:3.01:45,3,0	1/1:0,11:11:30.10:450,30,0	1/1:1,23:24:63.21:944,63,0	1/1:0,20:20:54.16:786,54,0	1/1:0,12:12:36.08:497,36,0	1/1:0,5:5:15.05:225,15,0	1/1:0,37:37:99:1574,105,0	1/1:0,6:6:18.06:270,18,0	1/1:1,4:5:12.04:170,12,0	1/1:0,13:13:33.11:495,33,0	1/1:0,8:8:24.08:360,24,0	1/1:0,14:14:42.13:606,42,0	1/1:0,2:2:2.90:45,3,0	1/1:0,6:6:18.06:270,18,0
chr10	46958335	.	ATT	A	4065.07	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-6.050;DP=303;FS=4.527;HRun=14;HaplotypeScore=64.2146;InbreedingCoeff=0.6369;MQ=75.98;MQ0=1;MQRankSum=-3.102;QD=15.57;ReadPosRankSum=4.794;VQSLOD=2.8205;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,24:26:57.01:526,57,0	1/1:0,4:4:8.97:83,9,0	0/0:24,0:11:24.35:0,24,223	0/0:18,0:11:14.35:0,14,149	1/1:0,4:4:5.96:55,6,0	1/1:2,12:14:30.01:277,30,0	1/1:0,13:14:29.72:261,30,0	1/1:1,13:14:35.73:306,36,0	1/1:1,6:7:8.97:83,9,0	1/1:2,3:5:8.98:83,9,0	1/1:0,8:9:23.72:206,24,0	1/1:2,7:9:15:139,15,0	1/1:3,5:8:5.99:55,6,0	1/1:4,3:7:8.98:82,9,0	1/1:0,6:7:11.23:90,11,0	1/1:2,4:6:5.99:55,6,0	1/1:4,15:19:33.01:305,33,0	1/1:3,13:17:32.96:305,33,0	1/1:7,0:14:19.63:83,20,0	1/1:2,0:11:21.94:95,22,0	1/1:2,0:12:25.17:107,25,0	1/1:1,1:2:2.99:28,3,0	1/1:0,4:4:12.01:111,12,0	1/1:0,13:13:32.98:304,33,0	1/1:0,7:7:12.01:111,12,0	1/1:4,6:10:17.68:140,18,0	1/1:2,0:13:27.91:119,28,0	1/1:0,3:3:6.01:55,6,0
chr10	46958532	.	TAAC	T	679.39	PASS	AB=0.979;AC=17;AF=0.304;AN=56;BaseQRankSum=3.624;DP=368;FS=28.394;HRun=0;HaplotypeScore=70.8175;InbreedingCoeff=0.0331;MQ=68.54;MQ0=9;MQRankSum=-2.105;QD=3.75;ReadPosRankSum=2.493;VQSLOD=0.2399;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:25,1:26:31.24:173,0,31	0/0:2,0:2:5.99:0,6,47	0/0:30,0:16:36.07:0,36,365	0/0:21,0:10:8.41:0,8,71	0/0:9,0:9:24.26:0,24,123	0/0:17,0:17:37.99:0,38,229	0/0:10,0:8:5.30:0,5,76	0/0:17,0:13:20.58:0,21,168	1/1:2,4:5:8.61:79,9,0	0/0:16,0:15:32.76:0,33,196	0/1:9,0:8:3.76:4,0,82	0/1:15,1:16:68.02:68,0,86	1/1:12,0:11:2.53:100,3,0	0/1:6,0:6:1.80:2,0,73	0/0:7,0:7:4.75:0,5,85	0/0:10,0:10:23.26:0,23,123	0/1:26,0:26:11.97:12,0,192	0/0:13,0:12:15.65:0,16,92	0/1:13,0:13:37.96:38,0,152	1/1:8,0:8:11.49:83,11,0	0/1:17,0:16:70.84:78,0,71	0/1:3,0:3:7.10:7,0,39	0/1:8,0:8:5.65:43,0,6	0/1:9,1:9:32.87:33,0,42	0/0:10,0:10:21.50:0,22,115	0/0:18,0:18:41.86:0,42,285	0/1:20,1:21:47.40:121,0,47	0/0:6,0:6:13.75:0,14,74
chr10	46958535	.	CAA	C	2959.79	PASS	AB=0.724;AC=47;AF=0.839;AN=56;BaseQRankSum=-1.928;DP=372;FS=1.053;HRun=15;HaplotypeScore=58.0604;InbreedingCoeff=0.2698;MQ=67.78;MQ0=10;MQRankSum=-0.320;QD=8.76;ReadPosRankSum=4.047;VQSLOD=0.8199;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:25:53.97:226,54,0	0/0:2,0:2:0:0,0,0	0/0:31,0:16:15.29:0,15,139	0/1:23,0:9:2.29:2,0,10	1/1:2,7:9:17.91:158,18,0	1/1:4,12:18:15.53:289,16,0	1/1:6,2:7:11.71:90,12,0	1/1:7,7:11:20.66:170,21,0	1/1:5,0:5:6.23:24,6,0	1/1:4,9:13:14.78:176,15,0	0/1:4,4:8:6.20:100,0,6	1/1:6,0:15:10.65:46,11,0	1/1:1,0:10:21.96:94,22,0	0/1:5,2:7:9.98:63,0,10	1/1:7,1:8:8.89:74,9,0	1/1:4,6:11:17.85:203,18,0	1/1:19,8:28:28.63:231,29,0	0/1:5,9:13:17.49:158,0,17	1/1:7,0:13:13.52:58,14,0	1/1:0,1:8:22.21:109,22,0	1/1:6,0:17:24.62:106,25,0	1/1:2,0:3:2.56:10,3,0	1/1:1,0:8:10.66:43,11,0	0/1:3,0:9:2.72:48,0,3	1/1:1,8:9:17.91:158,18,0	1/1:6,11:18:29.53:249,30,0	1/1:5,1:20:18.30:125,18,0	1/1:2,4:6:8.97:79,9,0
chr10	46958630	.	GA	G	1023.01	PASS	AB=0.771;AC=29;AF=0.518;AN=56;BaseQRankSum=1.567;DP=455;FS=1.245;HRun=16;HaplotypeScore=54.2460;InbreedingCoeff=0.2681;MQ=57.75;MQ0=17;MQRankSum=0.325;QD=3.37;ReadPosRankSum=4.173;VQSLOD=-0.6254;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:40:48.62:0,49,354	1/1:3,0:4:5.65:30,6,0	0/0:23,0:10:10.39:0,10,60	0/0:8,0:4:1:0,1,32	0/1:14,4:19:8.09:8,0,40	0/1:7,12:21:0.86:63,0,1	1/1:8,7:15:16.50:92,17,0	0/1:15,6:18:13.75:42,0,14	0/0:9,0:9:8.97:0,9,72	1/1:8,3:10:13.60:77,14,0	0/1:4,8:14:14.46:31,0,14	0/0:13,0:12:14.81:0,15,107	0/0:10,0:11:6.76:0,7,50	1/1:6,4:10:5.79:36,6,0	0/1:9,10:20:38.61:86,0,39	1/1:2,11:14:22.61:132,23,0	1/1:8,20:28:4.66:129,5,0	1/1:14,4:18:28.49:165,28,0	0/0:13,2:13:0.47:0,0,108	0/0:15,1:16:23.73:0,24,175	0/1:10,2:10:5.32:5,0,49	0/1:19,2:19:6.84:7,0,42	0/0:12,0:14:11.40:0,11,122	0/1:14,1:17:35.90:36,0,61	1/1:5,10:16:21.34:127,21,0	1/1:6,10:16:19.40:113,19,0	0/1:10,0:11:6:6,0,70	1/1:3,3:4:2.87:18,3,0
chr10	46958734	.	C	CA	8624.08	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-12.164;DP=608;FS=1.450;HRun=5;HaplotypeScore=63.2317;InbreedingCoeff=0.9997;MQ=73.41;MQ0=0;MQRankSum=-0.187;QD=34.77;ReadPosRankSum=2.662;VQSLOD=5.1581;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,35:37:90.76:1181,91,0	0/0:21,0:21:60.13:0,60,636	0/0:19,0:18:38.66:0,39,389	0/0:26,0:24:59.31:0,59,555	0/0:21,0:21:48.10:0,48,507	0/0:29,0:29:78.15:0,78,814	0/0:14,0:14:39.07:0,39,409	0/0:26,0:26:63.07:0,63,641	1/1:0,16:16:45.15:592,45,0	0/0:17,0:16:45.09:0,45,469	0/0:23,0:23:60.15:0,60,645	1/1:2,14:16:42.14:551,42,0	1/1:1,21:22:54.18:710,54,0	0/0:14,0:14:42.05:0,42,430	0/0:24,0:24:63.07:0,63,662	0/0:21,0:21:63.16:0,63,677	0/0:26,0:26:66.10:0,66,686	0/0:19,0:20:29.39:0,29,514	1/1:3,20:23:60.19:788,60,0	1/1:2,20:22:60.11:750,60,0	1/1:2,29:31:84.27:1105,84,0	1/1:2,9:11:27.09:355,27,0	1/1:1,21:22:60.20:789,60,0	1/1:2,15:17:48.14:618,48,0	0/0:18,0:18:54.12:0,54,572	0/0:31,0:31:78.17:0,78,823	1/1:1,30:30:90.29:1184,90,0	0/0:10,0:10:30.08:0,30,322
chr10	46958899	.	AG	A	7642.62	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=3.206;DP=707;FS=5.567;HRun=3;HaplotypeScore=78.4622;InbreedingCoeff=0.9982;MQ=85.45;MQ0=0;MQRankSum=-2.009;QD=33.23;ReadPosRankSum=1.715;VQSLOD=5.3808;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,147,2095	0/0:7,0:7:21.07:0,21,302	0/0:28,0:28:78.24:0,78,1074	0/0:17,0:17:45.15:0,45,638	1/1:0,25:25:69.22:853,69,0	0/0:22,0:22:66.21:0,66,932	0/0:19,0:19:51.15:0,51,714	1/1:2,29:31:87.26:1067,87,0	0/0:27,0:27:81.26:0,81,1146	1/1:1,25:26:75.18:891,75,0	1/1:0,17:17:45.10:540,45,0	0/0:31,0:31:93.29:0,93,1303	0/0:36,0:36:99:0,108,1535	1/1:0,16:16:48.15:595,48,0	0/0:24,0:24:72.23:0,72,1019	1/1:1,25:26:72.14:872,72,0	1/1:0,20:20:54.17:669,54,0	1/1:1,22:23:51.16:632,51,0	0/0:22,0:22:63.19:0,63,870	0/0:30,0:30:81.22:0,81,1123	0/0:48,0:48:99:0,141,1970	0/0:33,0:33:87.09:0,87,1121	0/0:22,0:22:57.17:0,57,795	0/0:25,0:25:69.22:0,69,973	1/1:0,12:12:33.10:409,33,0	1/1:1,26:27:75.19:892,75,0	0/0:35,0:35:99:0,105,1493	1/1:0,7:7:18.06:223,18,0
chr10	46960323	.	T	TG	2783.28	PASS	AB=1.000;AC=31;AF=0.554;AN=56;BaseQRankSum=6.568;DP=427;FS=1.076;HRun=3;HaplotypeScore=72.4356;InbreedingCoeff=0.8687;MQ=49.34;MQ0=11;MQRankSum=-3.953;QD=11.13;ReadPosRankSum=0.797;VQSLOD=1.5197;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:24:26.05:0,26,268	0/0:4,0:4:8.36:0,8,58	0/0:12,0:3:3:0,3,27	0/1:10,0:6:4.27:4,0,18	1/1:17,0:17:25.46:147,25,0	0/0:22,0:22:44.84:0,45,384	0/0:17,0:16:26.61:0,27,219	1/1:21,0:19:41.48:263,41,0	0/0:12,0:11:21.40:0,21,176	1/1:13,0:12:29.34:194,29,0	1/1:16,1:16:31.96:189,32,0	0/0:8,0:8:8.87:0,9,64	0/0:11,0:11:18.22:0,18,118	1/1:12,0:12:19.01:125,19,0	0/0:28,0:28:62.97:0,63,563	1/1:22,0:22:55.81:369,56,0	1/1:28,1:29:50.22:326,50,0	1/1:17,0:16:38.23:252,38,0	1/1:10,0:10:18.49:113,18,0	1/1:9,0:9:17.57:112,18,0	1/1:12,0:11:14.83:105,15,0	0/0:15,0:12:17.25:0,17,155	0/0:9,0:9:9.77:0,10,125	0/0:13,0:13:5.38:0,5,32	1/1:15,0:14:26.01:153,26,0	1/1:14,0:13:38.06:269,38,0	1/1:23,2:22:47.76:317,48,0	1/1:7,0:6:11.54:64,12,0
chr10	46960326	.	GAA	G	1587.39	PASS	AB=0.788;AC=31;AF=0.554;AN=56;BaseQRankSum=8.896;DP=450;FS=4.271;HRun=18;HaplotypeScore=77.6234;InbreedingCoeff=0.6671;MQ=51.26;MQ0=10;MQRankSum=-0.336;QD=5.69;ReadPosRankSum=4.248;VQSLOD=-0.5567;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:28:49.98:0,50,445	0/0:5,0:5:5.48:0,5,31	0/0:18,0:5:8.66:0,9,76	0/0:11,0:6:6.32:0,6,49	0/1:14,4:19:15.29:93,0,15	0/0:21,0:25:40.89:0,41,461	0/0:14,0:14:26.33:0,26,238	1/1:10,7:18:20.80:147,21,0	0/1:10,1:12:1.45:1,0,147	1/1:8,5:12:1.22:66,1,0	1/1:12,7:18:20.62:157,21,0	0/0:6,0:11:7.21:0,7,53	0/0:6,0:14:8.85:0,9,66	1/1:8,2:11:11.49:78,11,0	0/1:12,3:27:27.08:27,0,62	1/1:12,9:22:31.80:216,32,0	1/1:15,11:27:19.49:146,19,0	1/1:12,7:18:6.70:138,7,0	1/1:4,3:8:11.51:78,12,0	1/1:3,6:10:13.35:93,13,0	1/1:7,3:10:2.79:22,3,0	0/0:13,0:13:22.63:0,23,167	0/0:11,0:11:22.67:0,23,170	0/0:7,0:15:15.02:0,15,155	1/1:4,7:14:16.28:123,16,0	1/1:6,7:13:17.27:122,17,0	1/1:18,6:23:25.80:180,26,0	1/1:1,6:6:14.69:103,15,0
chr10	46961573	.	T	TCCTGTACAC	32411.25	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-15.812;DP=763;FS=2.015;HRun=0;HaplotypeScore=235.1148;InbreedingCoeff=0.9742;MQ=82.53;MQ0=0;MQRankSum=-19.653;QD=104.89;ReadPosRankSum=-1.811;VQSLOD=4.4203;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:64,0:64:99:0,190,5639	1/1:2,4:10:18.06:839,18,0	0/0:28,0:28:78.09:0,78,2018	0/0:27,0:27:75.14:0,75,2033	1/1:7,16:32:33.07:1606,33,0	0/0:24,0:24:69.24:0,69,2167	0/0:19,0:19:57.18:0,57,1664	1/1:13,13:41:99:4989,120,0	0/0:26,0:26:78.27:0,78,2434	1/1:5,16:28:75.24:3440,75,0	1/1:1,9:12:27.09:1332,27,0	0/0:45,0:45:99:0,129,3989	0/0:31,0:31:90.29:0,90,2707	1/1:4,14:26:57.20:2663,57,0	1/1:8,26:42:99:4837,102,0	1/1:10,21:35:87.30:4025,87,0	1/1:4,11:18:42.14:2024,42,0	1/1:1,1:6:3.01:148,3,0	0/0:21,0:20:60.14:0,60,1757	0/0:19,0:19:57.20:0,57,1731	0/0:57,0:57:99:0,166,4850	0/0:21,0:21:57.20:0,57,1741	0/0:21,0:21:57.18:0,57,1705	0/0:21,0:21:63.20:0,63,1873	1/1:6,9:20:42.10:1908,42,0	1/1:5,15:30:87.27:3560,87,0	0/0:30,0:30:90.30:0,90,2680	1/1:1,6:8:21.07:1039,21,0
chr10	46961747	.	C	CCTGG	17593.67	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-9.574;DP=714;FS=5.587;HRun=0;HaplotypeScore=125.2394;InbreedingCoeff=0.9999;MQ=83.72;MQ0=0;MQRankSum=-8.352;QD=72.40;ReadPosRankSum=1.914;VQSLOD=7.0592;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:78.22:0,78,1554	0/0:11,0:11:33.11:0,33,688	0/0:24,0:24:66.01:0,66,1257	0/0:25,0:25:75.21:0,75,1448	1/1:0,25:27:72.25:2036,72,0	0/0:31,0:31:93.26:0,93,1812	0/0:29,0:29:87.24:0,87,1741	1/1:7,19:28:81.26:2173,81,0	0/0:24,0:24:72.25:0,72,1509	1/1:4,19:24:63.22:1783,63,0	1/1:4,17:23:45.15:1304,45,0	0/0:28,0:28:78.27:0,78,1632	0/0:25,0:25:75.24:0,75,1532	1/1:1,21:22:63.22:1822,63,0	0/0:39,0:39:99:0,108,2124	1/1:2,21:25:69.24:1879,69,0	1/1:0,20:23:51.18:1471,51,0	1/1:0,12:14:30.10:868,30,0	0/0:27,0:27:78.27:0,78,1633	0/0:29,0:29:81.28:0,81,1659	0/0:41,0:41:99:0,120,2387	0/0:31,0:31:90.30:0,90,1849	0/0:28,0:28:75.21:0,75,1525	0/0:23,0:23:69.22:0,69,1409	1/1:3,13:16:36.12:1037,36,0	1/1:4,22:28:81.22:2185,81,0	0/0:29,0:29:84.29:0,84,1714	1/1:1,11:13:36.12:1036,36,0
chr10	46962100	.	AG	A	16604.58	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-0.164;DP=601;FS=15.147;HRun=2;HaplotypeScore=134.7748;InbreedingCoeff=0.8996;MQ=68.69;MQ0=15;MQRankSum=-3.484;QD=30.19;ReadPosRankSum=4.570;VQSLOD=3.1099;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,36:36:66.20:840,66,0	1/1:0,9:9:24.08:310,24,0	0/0:25,0:16:4.95:0,5,371	0/0:26,0:16:32.31:0,32,279	1/1:2,15:16:30.08:367,30,0	1/1:3,22:23:56.97:699,57,0	1/1:1,14:13:30.07:374,30,0	1/1:2,25:26:72.20:913,72,0	1/1:2,10:12:33.06:394,33,0	1/1:0,23:23:66.17:829,66,0	1/1:0,10:10:9.03:115,9,0	1/1:0,24:24:69.22:891,69,0	1/1:0,20:20:54.18:698,54,0	1/1:0,20:20:51.17:660,51,0	1/1:1,27:28:72.19:913,72,0	1/1:2,29:30:84.27:1087,84,0	1/1:2,24:25:60.10:738,60,0	1/1:0,14:14:39.13:504,39,0	1/1:1,19:18:51.12:626,51,0	1/1:1,16:17:39.13:504,39,0	1/1:2,29:29:63.01:814,63,0	1/1:0,14:14:33.11:422,33,0	1/1:2,14:16:38.13:450,38,0	1/1:1,16:17:42.14:544,42,0	1/1:2,20:21:30.10:388,30,0	1/1:2,28:30:84.22:1055,84,0	1/1:1,25:26:75.24:968,75,0	1/1:0,14:13:39.13:504,39,0
chr10	46962114	.	CTG	C	13593.77	PASS	AB=0.615;AC=51;AF=0.911;AN=56;BaseQRankSum=-1.490;DP=642;FS=20.971;HRun=0;HaplotypeScore=163.8134;InbreedingCoeff=0.7923;MQ=58.02;MQ0=16;MQRankSum=2.469;QD=24.67;ReadPosRankSum=3.439;VQSLOD=4.2088;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,25:37:65.98:784,66,0	1/1:2,7:9:27.08:332,27,0	0/0:39,0:10:14.81:0,15,144	0/0:52,0:17:8.47:0,8,121	1/1:6,10:14:27.04:318,27,0	1/1:8,16:23:50.94:580,51,0	1/1:9,7:17:23.91:274,24,0	1/1:21,10:31:50.88:583,51,0	1/1:0,10:10:27.09:337,27,0	1/1:13,11:24:57.16:682,57,0	1/1:12,5:17:11.96:140,12,0	1/1:3,21:24:63.20:786,63,0	1/1:5,14:19:45.14:561,45,0	1/1:6,14:20:48.15:596,48,0	1/1:7,17:24:60.19:747,60,0	1/1:9,20:29:60.18:738,60,0	1/1:11,15:26:54.13:653,54,0	0/1:6,10:16:2.47:407,0,2	1/1:10,8:17:39.12:480,39,0	1/1:4,12:16:36.10:432,36,0	1/1:17,13:28:48.09:584,48,0	1/1:1,12:13:29.68:342,30,0	1/1:6,10:16:36.09:432,36,0	1/1:7,9:17:29.93:351,30,0	1/1:12,11:23:27.05:311,27,0	1/1:12,15:26:57.17:696,57,0	1/1:9,20:29:81.25:1007,81,0	1/1:2,15:18:38.93:443,39,0
chr10	46962343	.	G	GT	8415.77	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=1.689;DP=548;FS=21.392;HRun=1;HaplotypeScore=79.3544;InbreedingCoeff=0.9993;MQ=83.37;MQ0=2;MQRankSum=-3.955;QD=39.89;ReadPosRankSum=2.431;VQSLOD=3.0030;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:54.11:0,54,665	0/0:8,0:8:24.08:0,24,311	0/0:18,0:17:48.13:0,48,582	0/0:29,0:23:49.65:0,50,571	1/1:0,16:16:48.12:693,48,0	0/0:27,0:27:81.26:0,81,1050	0/0:20,0:20:60.20:0,60,779	1/1:0,28:28:84.26:1220,84,0	0/0:18,0:18:54.16:0,54,687	1/1:1,22:24:69.18:987,69,0	1/1:0,19:19:57.15:828,57,0	0/0:27,0:27:72.16:0,72,887	0/0:20,0:20:60.19:0,60,773	1/1:1,11:12:27.09:405,27,0	0/0:24,0:24:69.21:0,69,881	1/1:1,18:19:45.15:674,45,0	1/1:0,17:17:45.15:672,45,0	1/1:1,9:10:27.09:404,27,0	0/0:18,0:18:42.12:0,42,531	0/0:11,0:11:29.99:0,30,325	0/0:28,0:28:75.23:0,75,957	0/0:15,0:15:45.13:0,45,568	0/0:15,0:15:45.15:0,45,583	0/0:24,0:24:69.21:0,69,879	1/1:1,16:18:48.16:705,48,0	1/1:0,24:24:72.22:1039,72,0	0/0:15,0:15:45.15:0,45,583	1/1:3,20:24:54.17:789,54,0
chr10	46962375	.	GTCTC	G	47.46	PASS	AB=1.000;AC=7;AF=0.146;AN=48;BaseQRankSum=-1.274;DP=575;FS=2.111;HRun=0;HaplotypeScore=145.2115;InbreedingCoeff=0.4571;MQ=62.68;MQ0=9;MQRankSum=1.848;QD=0.66;ReadPosRankSum=0.700;VQSLOD=2.8106;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:5.99:0,6,48	0/0:7,0:7:2.74:0,3,12	./.	./.	0/0:19,0:18:6.02:0,6,96	1/1:20,6:25:3.01:46,3,0	1/1:15,2:17:6.02:92,6,0	0/0:43,0:42:11.97:0,12,150	0/0:19,0:19:5.74:0,6,36	0/0:24,0:23:15.05:0,15,285	./.	0/1:19,0:19:0:0,0,0	0/0:15,0:16:2.74:0,3,12	0/0:18,0:18:3.01:0,3,32	0/0:19,0:27:15.05:0,15,268	0/0:18,0:16:6.02:0,6,96	0/0:21,0:21:15.05:0,15,266	0/0:9,0:9:18.02:0,18,291	0/0:24,0:23:12.50:0,12,224	./.	0/0:34,0:34:27.07:0,27,465	0/0:10,0:10:3:0,3,25	1/1:9,0:9:2.59:10,3,0	0/0:21,0:23:8.47:0,8,45	0/0:22,0:22:9.03:0,9,121	0/0:20,0:20:30.10:0,30,575	0/0:20,0:20:12.98:0,13,189	0/0:17,0:17:0.47:0,0,1
chr10	46962738	.	TCC	T	7686.12	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-11.296;DP=663;FS=0.000;HRun=9;HaplotypeScore=108.0266;InbreedingCoeff=0.9938;MQ=71.96;MQ0=3;MQRankSum=-1.052;QD=28.57;ReadPosRankSum=0.395;VQSLOD=4.6075;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:3,0:40:72.86:0,73,269	0/0:2,0:12:18.02:0,18,170	0/0:18,0:18:28.74:0,29,476	0/0:16,0:17:26.97:0,27,290	1/1:0,28:28:72.20:834,72,0	0/0:21,0:21:57.02:0,57,934	0/0:16,0:17:50.65:0,51,773	1/1:5,26:31:72.19:828,72,0	0/0:3,0:33:64.88:0,65,228	1/1:3,39:42:99:1254,108,0	1/1:0,13:13:27.08:312,27,0	0/0:5,0:32:70.38:0,70,264	0/0:3,0:26:44.97:0,45,174	1/1:2,18:19:51.14:594,51,0	0/0:1,0:20:14.89:0,15,145	1/1:2,30:31:78.22:907,78,0	1/1:1,32:32:75.22:874,75,0	1/1:1,13:14:30.08:350,30,0	0/0:3,0:9:18.03:0,18,183	0/0:9,0:18:21.03:0,21,220	0/0:11,0:27:36.04:0,36,356	0/0:1,0:21:40.40:0,40,141	0/0:0,0:21:44.79:0,45,158	0/0:6,0:34:67.37:0,67,237	1/1:1,21:22:60.17:699,60,0	1/1:0,22:22:66.18:755,66,0	0/0:7,0:28:27.06:0,27,301	1/1:2,10:12:24.07:280,24,0
chr10	46963155	.	TTCTCTCTCTCTC	T	1038.86	PASS	AB=0.968;AC=19;AF=0.396;AN=48;BaseQRankSum=2.558;DP=519;FS=12.601;HRun=0;HaplotypeScore=158.6131;InbreedingCoeff=0.2387;MQ=52.54;MQ0=18;MQRankSum=1.458;QD=4.54;ReadPosRankSum=3.126;VQSLOD=2.2289;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:32:12.93:0,13,347	0/0:13,0:13:15.44:0,15,246	./.	./.	0/1:19,0:21:47.11:194,0,47	0/0:23,0:22:6.02:0,6,190	0/0:20,0:18:7.43:0,7,219	./.	0/0:23,0:21:12.04:0,12,490	0/1:25,1:27:99:106,0,194	1/1:10,0:12:3.01:63,3,0	0/0:24,0:24:9.43:0,9,320	0/0:16,0:15:27.09:0,27,856	0/1:13,0:14:13.07:13,0,35	0/0:14,0:14:12.03:0,12,222	0/1:17,0:16:16:16,0,33	0/1:16,0:16:77.42:77,0,104	1/1:15,0:12:5.99:51,6,0	1/1:14,2:15:3.35:199,3,0	1/1:17,0:17:6:51,6,0	./.	0/0:24,0:23:5.66:0,6,336	0/1:14,0:13:0:0,0,0	0/0:24,0:24:20.71:0,21,998	1/1:15,2:18:5.99:86,6,0	0/1:20,0:20:89.68:134,0,90	1/1:18,1:20:10.57:203,11,0	0/0:19,0:18:5.51:0,6,146
chr10	46963439	.	TC	T	4489.05	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-0.013;DP=637;FS=1.160;HRun=5;HaplotypeScore=108.0038;InbreedingCoeff=0.9999;MQ=74.33;MQ0=0;MQRankSum=-0.444;QD=29.53;ReadPosRankSum=3.354;VQSLOD=4.6012;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,22:24:63.18:715,63,0	0/0:11,0:11:33.11:0,33,451	0/0:30,0:29:60.54:0,61,851	0/0:30,0:29:78.16:0,78,991	0/0:29,0:29:84.28:0,84,1148	0/0:27,0:27:78.26:0,78,1067	0/0:24,0:24:63.21:0,63,860	0/0:32,0:32:90.28:0,90,1188	1/1:1,28:29:78.22:885,78,0	0/0:26,0:26:75.25:0,75,1022	0/0:15,0:15:39.12:0,39,517	1/1:2,24:26:66.19:749,66,0	1/1:1,27:28:69.20:783,69,0	0/0:19,0:19:54.18:0,54,739	0/0:32,0:32:93.31:0,93,1269	0/0:25,0:25:66.22:0,66,903	0/0:20,0:20:57.19:0,57,779	0/0:14,0:14:42.13:0,42,557	0/0:20,0:19:42.14:0,42,573	0/0:23,0:23:69.23:0,69,943	0/0:22,0:22:59.90:0,60,804	1/1:1,14:15:39.11:440,39,0	1/1:0,18:18:45.13:509,45,0	1/1:0,12:12:36.10:408,36,0	0/0:22,0:22:57.18:0,57,765	0/0:22,0:22:60.20:0,60,821	0/0:28,0:28:69.22:0,69,927	0/0:14,0:13:36.12:0,36,491
chr10	46963642	.	C	CT	3942.83	PASS	AB=1.000;AC=24;AF=0.429;AN=56;BaseQRankSum=0.898;DP=580;FS=0.000;HRun=9;HaplotypeScore=95.1090;InbreedingCoeff=0.7728;MQ=66.85;MQ0=23;MQRankSum=2.194;QD=12.40;ReadPosRankSum=2.140;VQSLOD=3.3295;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:23:26.66:0,27,196	0/0:7,0:7:14.99:0,15,130	0/0:76,0:26:15.80:0,16,181	0/1:92,0:19:34.62:35,0,108	1/1:14,6:20:38.38:398,38,0	0/1:4,0:3:1.48:1,0,43	0/0:12,0:12:0.92:0,1,98	1/1:14,17:30:10.52:528,11,0	0/0:14,0:14:23.22:0,23,160	1/1:14,2:16:27.04:278,27,0	1/1:14,2:15:30.06:312,30,0	0/0:14,0:14:23.90:0,24,189	0/0:16,0:16:22.60:0,23,151	1/1:12,3:15:38.85:358,39,0	0/0:13,0:13:29.96:0,30,256	1/1:11,3:13:4.30:164,4,0	1/1:21,6:25:26.51:332,27,0	1/1:22,1:20:45.42:435,45,0	0/0:20,0:18:29.91:0,30,258	0/0:12,0:12:32.99:0,33,286	0/0:11,0:11:29.99:0,30,259	0/0:7,0:6:3.47:0,3,27	0/0:13,0:13:19.64:0,20,152	0/0:8,0:7:2.99:0,3,26	1/1:22,2:23:36.01:353,36,0	1/1:16,1:16:42.05:426,42,0	0/0:11,0:11:20.47:0,20,165	1/1:17,2:16:32.44:323,32,0
chr10	46963651	.	TC	T	3562.97	PASS	AB=0.978;AC=28;AF=0.500;AN=56;BaseQRankSum=7.110;DP=564;FS=2.037;HRun=1;HaplotypeScore=96.1444;InbreedingCoeff=0.3943;MQ=61.87;MQ0=24;MQRankSum=0.641;QD=9.84;ReadPosRankSum=5.825;VQSLOD=1.6424;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:25:1.58:0,2,43	0/0:8,0:8:15.86:0,16,186	0/1:81,2:23:3.72:4,0,193	0/0:89,0:19:5.66:0,6,190	1/1:16,4:20:35.70:321,36,0	0/1:4,0:3:5.64:6,0,59	0/1:13,0:13:19.26:19,0,108	0/1:23,3:25:41.46:221,0,41	0/1:12,0:12:23.68:24,0,26	1/1:3,7:10:15.62:161,16,0	1/1:5,12:16:37.29:292,37,0	0/0:15,0:15:4.80:0,5,63	0/1:18,1:19:7.22:38,0,7	1/1:3,12:15:38.01:391,38,0	0/0:10,0:10:28.29:0,28,288	1/1:5,10:13:4.91:99,5,0	1/1:8,19:25:25.09:283,25,0	1/1:10,15:22:58.03:589,58,0	0/0:15,0:11:33.02:0,33,315	0/0:13,0:13:35.97:0,36,345	0/0:11,0:11:30.01:0,30,292	0/1:4,0:3:11.78:17,0,12	0/1:13,0:13:5.24:11,0,5	0/0:6,0:5:2.99:0,3,23	1/1:4,19:22:36.84:373,37,0	1/1:3,14:16:44.27:387,44,0	0/0:9,0:8:21.77:0,22,167	1/1:4,15:16:21.20:327,21,0
chr10	46963654	.	TTTTTTTTCTCC	T	3228.29	PASS	AC=12;AF=0.222;AN=54;BaseQRankSum=-2.023;DP=550;FS=4.062;HRun=0;HaplotypeScore=162.3457;InbreedingCoeff=0.9427;MQ=60.93;MQ0=24;MQRankSum=-7.232;QD=38.43;ReadPosRankSum=4.898;VQSLOD=2.9902;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,20:24:27:744,27,0	0/0:8,0:8:24.01:0,24,798	0/0:80,0:23:54.65:0,55,1089	0/0:88,0:19:43.35:0,43,741	0/0:18,0:18:53.60:0,54,1364	0/0:4,0:3:9.03:0,9,427	0/0:13,0:13:30.10:0,30,1062	0/0:24,0:23:66.11:0,66,1856	1/1:1,8:10:18.06:593,18,0	0/0:11,0:11:32.94:0,33,921	0/0:17,0:16:39.63:0,40,987	1/1:1,11:12:18.06:560,18,0	1/1:3,17:20:26.69:857,27,0	0/0:14,0:14:39.13:0,39,1331	0/0:9,0:9:27.09:0,27,1386	0/0:16,0:13:26.87:0,27,834	0/0:27,0:25:37.31:0,37,1162	0/0:26,0:23:68.58:0,69,1726	0/0:14,0:10:30.10:0,30,1157	0/0:14,0:14:39.12:0,39,1493	0/0:9,0:9:24.08:0,24,1044	1/1:0,5:4:2.97:20,3,0	1/1:3,10:13:15.47:631,15,0	./.	0/0:23,0:22:42.74:0,43,1363	0/0:17,0:16:48.13:0,48,1146	0/0:9,0:8:24.08:0,24,548	0/0:19,0:16:33.01:0,33,913
chr10	46963663	.	TCCC	T	195.31	PASS	AB=0.933;AC=14;AF=0.259;AN=54;BaseQRankSum=6.691;DP=477;FS=3.159;HRun=12;HaplotypeScore=111.4941;InbreedingCoeff=0.3075;MQ=59.44;MQ0=16;MQRankSum=-6.981;QD=0.90;ReadPosRankSum=3.812;VQSLOD=-0.5203;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:24:13.40:74,13,0	0/0:8,0:8:9.03:0,9,166	0/0:64,0:20:34.01:0,34,288	0/1:68,0:14:40.37:40,0,193	0/1:15,2:18:60.34:60,0,138	0/0:4,0:3:3.01:0,3,39	0/0:13,0:13:15.88:0,16,197	0/0:20,0:20:17.72:0,18,132	1/1:10,0:10:12.10:41,12,0	0/0:12,0:12:20.40:0,20,144	0/1:15,1:15:14.55:15,0,86	0/1:11,0:12:11.10:11,0,11	1/1:18,0:20:14.59:49,15,0	0/1:13,1:14:8.40:8,0,121	0/0:8,0:8:18.06:0,18,310	0/0:13,1:11:19.40:0,19,155	0/1:21,1:20:16.90:17,0,62	0/0:24,0:22:48.17:0,48,297	0/0:8,0:6:5.89:0,6,58	0/0:7,0:8:18.06:0,18,242	0/0:7,0:7:9.03:0,9,117	0/0:5,0:4:2.74:0,3,12	1/1:11,0:13:13.14:45,13,0	./.	0/0:19,0:18:30.06:0,30,197	0/0:18,1:18:3.89:0,4,215	0/0:6,0:6:3.69:0,4,74	0/0:13,0:10:18.72:0,19,83
chr10	46963668	.	C	CCCA	527.97	PASS	AB=1.000;AC=10;AF=0.185;AN=54;BaseQRankSum=-2.888;DP=475;FS=10.613;HRun=0;HaplotypeScore=113.9428;InbreedingCoeff=0.6693;MQ=61.52;MQ0=20;MQRankSum=-0.590;QD=11.23;ReadPosRankSum=0.615;VQSLOD=2.7018;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:26.89:0,27,291	0/0:6,0:6:14.58:0,15,146	0/0:63,0:21:36.78:0,37,294	0/0:65,0:15:16.25:0,16,186	0/0:18,0:18:48.11:0,48,558	0/1:3,0:2:1.98:2,0,19	0/1:12,0:12:19.82:20,0,71	0/0:23,0:21:41.89:0,42,408	0/0:11,0:11:21.05:0,21,250	0/0:13,0:13:27.07:0,27,355	0/0:17,0:16:39.08:0,39,454	0/0:13,0:13:18.05:0,18,219	0/0:18,0:18:27.08:0,27,324	0/0:13,0:13:39.09:0,39,466	0/0:8,0:8:16.69:0,17,157	0/0:14,0:11:24.02:0,24,288	0/0:21,0:19:33.08:0,33,376	0/0:24,0:22:60.14:0,60,754	1/1:8,0:5:5.71:38,6,0	1/1:2,6:9:18.02:308,18,0	1/1:0,7:7:9.03:183,9,0	0/0:5,0:4:2.96:0,3,19	0/0:13,0:13:18.05:0,18,219	./.	0/0:17,0:16:39.11:0,39,514	0/0:22,0:20:54.10:0,54,673	1/1:3,5:8:5.99:122,6,0	0/0:13,0:10:27.07:0,27,312
chr10	46963674	.	C	CCCCCCCG	295.34	PASS	AB=0.991;AC=8;AF=0.143;AN=56;BaseQRankSum=0.046;DP=451;FS=17.389;HRun=0;HaplotypeScore=133.4265;InbreedingCoeff=0.4217;MQ=60.36;MQ0=14;MQRankSum=-0.034;QD=3.32;ReadPosRankSum=-2.103;VQSLOD=1.3043;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:32.94:0,33,486	0/0:8,0:8:14.83:0,15,200	0/0:48,0:16:7.59:0,8,196	0/1:52,0:13:17.72:18,0,84	0/0:21,0:22:54.13:0,54,844	1/1:3,0:5:3:27,3,0	1/1:5,5:10:9.92:326,10,0	0/0:16,0:14:24.91:0,25,347	0/0:10,0:10:21.06:0,21,368	0/0:14,0:14:39.08:0,39,599	0/0:17,0:17:44.07:0,44,602	0/0:13,0:13:24.06:0,24,388	0/0:20,0:20:30.05:0,30,526	0/0:14,0:14:36.57:0,37,633	0/1:7,0:7:39.66:40,0,57	0/0:11,0:8:18.05:0,18,330	0/0:18,0:18:30.04:0,30,488	0/0:24,0:23:63.15:0,63,1124	0/1:4,0:1:0:0,0,0	0/1:6,0:6:2.89:8,0,3	0/0:11,0:11:10.76:0,11,50	0/0:6,0:5:5.96:0,6,45	0/0:15,0:15:21.02:0,21,357	0/0:7,0:6:5.99:0,6,50	0/0:20,0:19:45.10:0,45,767	0/0:22,0:21:59.62:0,60,987	0/0:6,0:6:6.20:0,6,35	0/0:12,0:10:26.68:0,27,434
chr10	46963921	.	GT	G	9397.43	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=10.399;DP=548;FS=0.000;HRun=9;HaplotypeScore=68.1035;InbreedingCoeff=0.9940;MQ=63.75;MQ0=6;MQRankSum=2.381;QD=22.70;ReadPosRankSum=3.425;VQSLOD=5.5966;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,30:33:86.92:783,87,0	0/0:8,0:8:21.06:0,21,242	0/0:20,0:12:20.71:0,21,194	0/0:17,0:10:13.76:0,14,148	1/1:3,24:27:59.98:540,60,0	1/1:2,17:19:45.02:412,45,0	1/1:1,7:8:21.01:192,21,0	1/1:2,15:17:44.97:401,45,0	1/1:2,17:19:42.02:384,42,0	1/1:1,25:26:75.01:679,75,0	1/1:1,14:15:26.99:246,27,0	1/1:1,14:15:42.02:384,42,0	1/1:1,11:12:30.02:274,30,0	1/1:1,19:20:54.03:494,54,0	0/0:16,0:16:48.11:0,48,540	1/1:1,19:20:51.03:467,51,0	1/1:5,32:37:90.04:823,90,0	1/1:2,13:14:33.02:302,33,0	0/0:24,0:24:63.14:0,63,686	0/0:17,0:15:36.10:0,36,408	0/0:15,0:15:45.12:0,45,509	1/1:2,21:23:63.03:576,63,0	1/1:2,22:24:57.03:522,57,0	1/1:1,15:16:36.02:330,36,0	1/1:3,23:26:57.02:522,57,0	1/1:1,24:24:66.02:599,66,0	0/0:16,0:16:48.14:0,48,551	1/1:0,17:17:51.03:467,51,0
chr10	46964438	.	C	CT	1202.07	PASS	AB=0.600;AC=7;AF=0.125;AN=56;BaseQRankSum=-7.832;DP=562;FS=1.237;HRun=9;HaplotypeScore=62.9797;InbreedingCoeff=0.8500;MQ=67.27;MQ0=0;MQRankSum=1.168;QD=17.94;ReadPosRankSum=-0.825;VQSLOD=3.4911;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,123,1037	0/0:8,0:8:24:0,24,208	0/0:13,0:11:20.49:0,20,170	0/0:13,0:13:15.91:0,16,118	0/0:15,0:16:37.84:0,38,318	0/0:23,0:23:53.32:0,53,447	0/0:30,0:30:83.97:0,84,727	0/0:36,0:36:74.93:0,75,643	0/0:12,0:12:29.94:0,30,251	0/0:21,0:20:44.96:0,45,391	0/0:13,0:14:28.87:0,29,237	0/0:25,0:25:68.97:0,69,599	0/0:16,0:16:38.94:0,39,330	0/0:26,0:26:62.96:0,63,547	0/0:20,0:20:53.92:0,54,455	0/0:23,0:23:50.95:0,51,439	0/0:36,0:37:99:0,104,882	0/0:14,0:15:37.86:0,38,318	1/1:2,14:16:42.03:421,42,0	1/1:2,13:15:27.03:285,27,0	1/1:6,11:18:24.06:266,24,0	0/0:13,0:13:29.96:0,30,256	0/0:11,0:11:20.98:0,21,182	0/0:28,0:28:71.98:0,72,625	0/0:17,0:18:34.95:0,35,285	0/0:28,0:28:62.96:0,63,547	0/1:6,12:18:6.99:378,0,7	0/0:4,0:4:12:0,12,104
chr10	46965021	.	C	CG	9400.50	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-16.194;DP=690;FS=1.300;HRun=0;HaplotypeScore=63.3018;InbreedingCoeff=0.9999;MQ=79.07;MQ0=0;MQRankSum=-4.086;QD=36.86;ReadPosRankSum=2.876;VQSLOD=4.9409;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,126,1617	0/0:13,0:13:39.06:0,39,487	0/0:21,0:21:47.22:0,47,573	0/0:29,0:29:78.03:0,78,887	1/1:0,26:26:63.21:904,63,0	0/0:19,0:19:54.12:0,54,686	0/0:24,0:24:69.17:0,69,867	1/1:2,29:31:86.83:1139,87,0	0/0:24,0:24:72.22:0,72,973	1/1:0,23:23:66.10:898,66,0	1/1:1,10:11:30.10:427,30,0	0/0:38,0:38:99:0,108,1392	0/0:24,0:24:69.20:0,69,911	1/1:0,26:26:66.22:957,66,0	0/0:25,0:25:75.19:0,75,954	1/1:1,31:32:42.19:1135,42,0	1/1:0,31:31:81.27:1183,81,0	1/1:0,14:14:42.14:613,42,0	0/0:15,0:15:45.11:0,45,565	0/0:23,0:23:69.23:0,69,960	0/0:25,0:25:69.22:0,69,945	0/0:27,0:27:81.22:0,81,1061	0/0:20,0:20:60.16:0,60,762	0/0:40,0:40:99:0,120,1642	1/1:0,21:21:54.18:788,54,0	1/1:1,19:20:53.88:658,54,0	0/0:26,0:25:78.13:0,78,945	1/1:0,20:20:48.16:700,48,0
chr10	46965726	.	T	TAAAAA	5984.04	PASS	AB=0.734;AC=10;AF=0.179;AN=56;BaseQRankSum=-7.191;DP=569;FS=156.410;HRun=5;HaplotypeScore=104.6559;InbreedingCoeff=-0.2206;MQ=86.71;MQ0=0;MQRankSum=-12.719;QD=34.99;ReadPosRankSum=-1.952;VQSLOD=0.2268;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,102,1847	0/0:10,0:10:30.10:0,30,553	0/0:29,0:29:77.99:0,78,1361	0/0:15,0:15:36.08:0,36,629	0/1:13,8:25:99:798,0,129	0/0:28,0:28:78.26:0,78,1461	0/0:10,0:10:24.07:0,24,449	0/1:12,5:18:99:517,0,407	0/0:16,0:16:48.16:0,48,899	0/1:16,12:28:99:1294,0,423	0/1:12,6:18:99:549,0,131	0/0:24,0:24:69.24:0,69,1292	0/0:25,0:25:72.25:0,72,1339	0/1:6,5:11:99:516,0,169	0/0:24,0:24:69.23:0,69,1276	0/1:9,5:13:99:507,0,354	0/1:11,1:12:99:127,0,260	0/1:7,5:12:99:338,0,254	0/0:27,0:27:72.24:0,72,1335	0/0:42,0:42:99:0,108,2022	0/0:23,0:23:63.21:0,63,1180	0/0:17,0:17:45.13:0,45,781	0/0:22,0:22:57.19:0,57,1067	0/0:9,0:9:24.07:0,24,450	0/1:4,12:17:99:1104,0,174	0/1:13,3:16:99:235,0,522	0/0:37,0:37:99:0,105,1929	0/0:3,0:3:9.03:0,9,169
chr10	46966636	.	TAAAAAAAAGA	T	1664.08	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.811;DP=369;FS=5.830;HRun=0;HaplotypeScore=106.0696;InbreedingCoeff=0.7972;MQ=67.32;MQ0=1;MQRankSum=-6.478;QD=64.00;ReadPosRankSum=1.886;VQSLOD=3.2301;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:63.22:0,63,3078	0/0:4,0:4:12.04:0,12,632	0/0:17,0:11:31.95:0,32,795	0/0:17,0:8:6.59:0,7,240	0/0:16,0:16:45.13:0,45,1923	1/1:1,16:17:45.08:1308,45,0	1/1:0,9:9:15.05:474,15,0	0/0:30,0:29:72.23:0,72,3345	0/0:13,0:13:36.12:0,36,1858	0/0:15,0:15:45.13:0,45,1911	0/0:12,0:12:30.10:0,30,1525	0/0:12,0:12:36.12:0,36,1706	0/0:12,0:12:36.12:0,36,1803	0/0:9,0:9:27.08:0,27,1268	0/0:7,0:7:21.06:0,21,945	0/0:9,0:9:27.09:0,27,1300	0/0:35,0:35:99:0,102,4513	0/0:23,0:23:63.21:0,63,3133	0/0:15,0:15:45.11:0,45,1719	0/0:14,0:14:33.11:0,33,1574	0/0:3,0:3:6.02:0,6,315	0/0:2,0:2:6.02:0,6,318	0/0:4,0:4:9.92:0,10,463	0/0:3,0:3:9.03:0,9,425	0/0:15,0:15:42.09:0,42,1523	0/0:15,0:15:45.14:0,45,1960	0/0:10,0:10:30.07:0,30,1176	0/0:7,0:7:21.07:0,21,1112
chr10	46966786	.	ACAGCAGCAG	A	710.94	PASS	AC=12;AF=1.000;AN=12;DP=352;FS=0.000;HRun=0;HaplotypeScore=99.9321;MQ=64.01;MQ0=8;QD=5.88;VQSLOD=1.5984;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	1/1:11,7:19:12.04:296,12,0	1/1:8,0:11:3.01:63,3,0	1/1:15,5:19:5.05:86,5,0	1/1:28,0:28:17.54:221,18,0	1/1:19,0:19:11.98:112,12,0	./.	./.	./.	./.	./.	1/1:23,0:23:1.14:3,1,0	./.	./.	./.	./.
chr10	46967788	.	T	TTCTTC	12103.37	PASS	AB=0.619;AC=49;AF=0.875;AN=56;BaseQRankSum=-4.713;DP=466;FS=8.370;HRun=0;HaplotypeScore=88.9320;InbreedingCoeff=0.3676;MQ=56.54;MQ0=35;MQRankSum=2.391;QD=27.20;ReadPosRankSum=6.638;VQSLOD=3.2710;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:10,7:9:12.06:171,0,12	0/1:2,0:7:10.16:16,0,10	0/0:16,0:9:14.30:0,14,202	0/0:5,0:3:2.87:0,3,15	1/1:30,0:29:61.48:1083,61,0	1/1:12,0:12:11.82:133,12,0	1/1:9,0:8:9.02:163,9,0	1/1:36,0:29:32.31:717,32,0	1/1:3,5:9:18.02:506,18,0	1/1:23,0:22:34.76:790,35,0	1/1:20,0:19:23.77:605,24,0	1/1:3,3:6:5.92:168,6,0	1/1:6,4:10:8.85:254,9,0	1/1:12,0:12:27.07:414,27,0	0/1:5,0:18:12.81:17,0,13	1/1:13,0:13:27.07:420,27,0	1/1:27,0:19:18.79:629,19,0	1/1:18,0:12:27.17:474,27,0	1/1:9,0:7:18.06:307,18,0	1/1:28,0:28:65.96:1038,66,0	1/1:8,0:6:6.02:104,6,0	1/1:1,7:9:18.05:307,18,0	1/1:4,10:14:17.87:440,18,0	1/1:2,7:8:9.03:241,9,0	1/1:22,0:22:26.29:527,26,0	1/1:24,0:23:23.72:828,24,0	1/1:28,0:28:54.26:987,54,0	1/1:24,0:21:42.78:763,43,0
chr10	46967789	.	T	TCTTC	13131.83	PASS	AB=1.000;AC=46;AF=0.821;AN=56;BaseQRankSum=-5.210;DP=467;FS=7.057;HRun=0;HaplotypeScore=81.8344;InbreedingCoeff=0.2480;MQ=54.61;MQ0=39;MQRankSum=3.452;QD=29.38;ReadPosRankSum=6.736;VQSLOD=3.6691;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:17,0:8:15.84:105,0,16	0/1:7,0:7:13.01:13,0,14	0/0:15,0:8:14.72:0,15,197	0/0:5,0:3:2.88:0,3,15	1/1:10,1:29:66.08:1208,66,0	1/1:10,0:10:11.95:143,12,0	1/1:8,0:7:9.03:108,9,0	1/1:29,0:29:48.87:813,49,0	1/1:9,0:9:17.91:356,18,0	1/1:15,0:22:49.40:877,49,0	1/1:8,0:19:32.94:690,33,0	0/1:5,0:5:26.55:100,0,27	0/1:12,0:11:39.98:153,0,40	1/1:6,0:12:27.04:449,27,0	0/1:18,0:18:1.96:2,0,27	1/1:7,0:13:27.03:460,27,0	1/1:19,0:20:10.92:691,11,0	1/1:9,0:12:30.57:536,31,0	1/1:6,4:8:21.03:415,21,0	1/1:1,25:29:68.96:1395,69,0	1/1:2,6:6:6.02:145,6,0	1/1:9,0:9:21.01:271,21,0	0/1:15,0:14:14.58:288,0,15	1/1:9,0:8:9.03:171,9,0	1/1:3,4:20:30.71:612,31,0	1/1:13,0:23:25.64:904,26,0	1/1:3,24:29:63.02:1417,63,0	1/1:15,0:21:47.04:810,47,0
chr10	46967790	.	T	TTC	2659.57	PASS	AB=0.825;AC=27;AF=0.482;AN=56;BaseQRankSum=-0.727;DP=458;FS=4.745;HRun=0;HaplotypeScore=102.3602;InbreedingCoeff=0.3798;MQ=53.66;MQ0=42;MQRankSum=2.905;QD=7.66;ReadPosRankSum=6.648;VQSLOD=2.4426;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:17,0:8:2.77:11,0,3	0/0:7,0:7:9.29:0,9,49	0/0:15,0:8:12.17:0,12,107	0/0:5,0:3:2.59:0,3,11	1/1:14,16:29:4.93:396,5,0	0/0:10,0:10:8.31:0,8,30	1/1:8,0:7:2.13:6,2,0	0/1:31,5:28:83.59:131,0,84	0/0:9,0:9:10.93:0,11,52	0/1:13,8:19:19.27:245,0,19	0/1:10,12:21:8.11:276,0,8	0/0:5,0:5:7.49:0,7,44	0/0:12,0:10:16.31:0,16,103	1/1:6,6:12:19.08:150,19,0	0/0:17,0:17:4.85:0,5,98	1/1:8,6:14:9.93:158,10,0	0/1:19,10:20:66.78:230,0,67	1/1:11,9:13:8.14:230,8,0	0/1:10,0:8:2.02:21,0,2	1/1:23,0:23:39.15:147,39,0	1/1:8,0:6:3.93:12,4,0	0/0:8,0:8:11.55:0,12,42	0/0:14,0:13:10.95:0,11,51	0/0:9,0:8:4.66:0,5,12	1/1:9,9:18:24.71:264,25,0	0/1:18,7:24:93.64:220,0,94	1/1:29,0:28:36.61:130,37,0	1/1:18,7:21:22.01:218,22,0
chr10	46968524	.	GTATCTATC	G	1714.12	PASS	AB=0.865;AC=22;AF=0.579;AN=38;BaseQRankSum=3.802;DP=620;FS=0.912;HRun=0;HaplotypeScore=151.4429;InbreedingCoeff=0.5919;MQ=67.19;MQ0=13;MQRankSum=-5.005;QD=6.21;ReadPosRankSum=1.656;VQSLOD=2.7737;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:22:15:0,15,177	./.	./.	./.	./.	1/1:16,4:20:9.03:218,9,0	./.	./.	0/0:24,0:26:14.99:0,15,160	0/0:30,0:34:14.97:0,15,122	./.	1/1:20,6:26:9.03:218,9,0	0/0:24,0:28:5.98:0,6,46	./.	1/1:25,0:31:12.04:222,12,0	1/1:24,0:32:12.04:223,12,0	1/1:13,0:17:3.01:56,3,0	1/1:11,0:11:5.88:35,6,0	0/0:25,0:24:12.03:0,12,388	1/1:21,5:26:9.03:194,9,0	0/1:17,0:18:18.30:67,0,18	./.	0/0:19,0:19:24.07:0,24,790	0/0:21,0:21:21.07:0,21,818	1/1:13,0:17:5.69:67,6,0	0/1:13,4:16:9.29:262,0,9	1/1:29,11:40:12.04:268,12,0	1/1:19,0:19:3.01:39,3,0
chr10	46970148	.	TA	T	859.91	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=6.890;DP=511;FS=0.641;HRun=9;HaplotypeScore=53.7920;InbreedingCoeff=0.7761;MQ=72.66;MQ0=0;MQRankSum=-0.405;QD=14.83;ReadPosRankSum=1.137;VQSLOD=3.5063;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:75.19:0,75,844	0/0:8,0:8:18.05:0,18,206	0/0:19,0:16:26.89:0,27,257	0/1:15,0:14:28.56:29,0,64	0/0:20,0:20:54.16:0,54,623	1/1:4,24:28:69.03:632,69,0	1/1:1,14:15:36.01:330,36,0	0/0:33,0:33:87.21:0,87,961	0/0:18,0:18:48.14:0,48,554	0/0:17,0:17:48.14:0,48,554	0/0:16,0:16:42.11:0,42,475	0/0:16,0:16:48.11:0,48,525	0/0:11,0:11:27.08:0,27,312	0/0:14,0:14:42.12:0,42,476	0/0:20,0:20:51.15:0,51,588	0/0:20,0:20:57.17:0,57,658	0/0:15,0:15:42.08:0,42,470	0/0:22,0:22:57.15:0,57,645	0/0:24,0:25:57:0,57,636	0/0:23,0:23:66.20:0,66,762	0/0:17,0:17:36.11:0,36,415	0/0:13,0:13:33.09:0,33,372	0/0:11,0:11:33.09:0,33,371	0/0:10,0:10:24.07:0,24,277	0/0:17,0:17:45.13:0,45,519	0/0:27,0:27:81.23:0,81,927	0/0:20,0:19:54.12:0,54,608	0/0:14,0:14:42.10:0,42,472
chr10	46970274	.	G	GTC	183.37	PASS	AB=1.000;AC=20;AF=0.435;AN=46;BaseQRankSum=1.508;DP=450;FS=10.229;HRun=0;HaplotypeScore=71.4455;InbreedingCoeff=0.3068;MQ=69.09;MQ0=10;MQRankSum=1.189;QD=0.88;ReadPosRankSum=-1.361;VQSLOD=0.0384;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:15:11.99:114,12,0	1/1:6,0:6:3:25,3,0	./.	./.	0/1:15,0:15:0:0,0,0	0/0:15,0:17:3.31:0,3,15	1/1:8,0:13:2.74:12,3,0	0/1:27,0:26:0:0,0,0	0/1:6,0:6:0:0,0,1	0/1:20,0:19:5:5,0,17	0/0:19,0:21:5.85:0,6,46	0/0:12,0:12:2.87:0,3,32	./.	./.	0/0:18,0:19:11.86:0,12,110	0/0:12,0:12:14.87:0,15,142	0/0:29,0:31:2.90:0,3,135	0/0:15,0:19:11.03:0,11,56	./.	1/1:10,0:10:3:25,3,0	1/1:12,11:25:3.01:44,3,0	0/0:7,0:7:0:0,0,0	1/1:13,0:13:2.97:20,3,0	0/0:17,0:17:6.01:0,6,64	1/1:17,0:17:3:25,3,0	0/0:18,0:16:2.79:0,3,14	0/1:25,0:25:33.27:33,0,47	0/1:15,0:14:8.79:9,0,10
chr10	46970374	.	A	AT	10024.26	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-7.200;DP=447;FS=1.780;HRun=6;HaplotypeScore=45.5800;InbreedingCoeff=0.9796;MQ=65.77;MQ0=0;MQRankSum=-0.039;QD=32.44;ReadPosRankSum=1.812;VQSLOD=5.1187;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,24:25:69.22:868,69,0	0/0:2,0:2:6.01:0,6,61	0/0:10,0:9:18.49:0,18,176	0/0:6,0:6:15.03:0,15,151	1/1:1,17:18:51.09:618,51,0	0/0:19,0:19:54.12:0,54,551	0/0:10,0:10:30.07:0,30,305	1/1:0,32:32:96.29:1193,96,0	1/1:1,13:14:33.11:415,33,0	1/1:2,21:23:60.19:754,60,0	1/1:3,20:23:54.17:679,54,0	1/1:1,11:12:27.09:340,27,0	1/1:0,8:8:24.08:302,24,0	1/1:2,14:16:45.14:565,45,0	0/0:22,0:22:64.02:0,64,639	1/1:3,9:12:27.09:340,27,0	1/1:2,17:19:50.19:608,50,0	1/1:2,17:19:48.15:604,48,0	0/0:14,0:14:36.08:0,36,367	0/0:20,0:19:51.11:0,51,520	0/0:12,0:12:33.07:0,33,337	1/1:0,10:10:27.09:340,27,0	1/1:1,11:12:26.78:339,27,0	1/1:1,11:12:27.09:340,27,0	1/1:1,14:15:42.13:529,42,0	1/1:1,18:19:51.14:626,51,0	0/0:23,0:22:63.10:0,63,627	1/1:3,17:20:45.14:566,45,0
chr10	46970838	.	G	GA	1350.08	PASS	AB=0.806;AC=8;AF=0.143;AN=56;BaseQRankSum=-6.399;DP=448;FS=0.575;HRun=9;HaplotypeScore=48.2576;InbreedingCoeff=0.7721;MQ=59.35;MQ0=4;MQRankSum=-0.129;QD=15.34;ReadPosRankSum=-3.051;VQSLOD=2.7547;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:65.95:0,66,573	0/0:7,0:7:17.99:0,18,156	0/0:8,0:6:15.44:0,15,126	0/0:3,0:1:2.99:0,3,24	0/0:23,0:23:59.96:0,60,517	0/0:15,0:15:35.95:0,36,305	0/0:13,0:12:20.99:0,21,182	0/0:34,0:34:83.93:0,84,723	0/0:8,0:8:20.99:0,21,182	0/0:22,0:23:53.01:0,53,446	0/0:17,0:17:23.46:0,23,207	0/0:12,0:12:29.99:0,30,260	0/0:13,0:13:29.93:0,30,250	0/0:17,0:17:32.96:0,33,283	0/0:17,0:16:41.98:0,42,365	0/0:7,0:8:20.02:0,20,162	0/0:31,0:31:77.98:0,78,677	0/0:12,0:12:29.99:0,30,260	0/1:7,6:12:2.01:199,0,2	1/1:6,18:24:45.89:460,46,0	1/1:2,7:9:18.05:199,18,0	0/0:5,0:5:12:0,12,104	0/0:14,0:14:23.98:0,24,208	0/0:9,0:9:21:0,21,182	0/0:19,0:19:50.99:0,51,443	0/0:22,0:21:59.98:0,60,518	1/1:7,22:29:36.66:637,37,0	0/1:12,1:13:0.18:0,0,227
chr10	46970984	.	A	AAAAC	17590.19	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=1.094;DP=528;FS=1.558;HRun=0;HaplotypeScore=94.6616;InbreedingCoeff=0.9016;MQ=69.10;MQ0=2;MQRankSum=-0.429;QD=38.49;ReadPosRankSum=1.431;VQSLOD=5.2339;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,8:17:30.01:638,30,0	1/1:1,1:2:3.01:72,3,0	0/0:18,0:13:11.39:0,11,132	0/0:14,0:10:9.03:0,9,145	1/1:3,19:22:60.12:1297,60,0	0/0:19,0:19:33.11:0,33,532	0/0:20,0:20:36.12:0,36,577	1/1:12,7:21:33:540,33,0	1/1:4,12:17:33.11:791,33,0	1/1:8,15:24:45.05:970,45,0	1/1:3,11:15:30.10:675,30,0	1/1:6,5:11:12.04:288,12,0	1/1:10,10:24:27.09:646,27,0	1/1:4,10:14:24.08:575,24,0	1/1:8,13:22:39.13:935,39,0	1/1:8,15:23:39.13:935,39,0	1/1:9,8:20:30.05:615,30,0	1/1:7,15:23:12.69:906,13,0	1/1:8,7:15:21.07:503,21,0	1/1:8,15:23:41.43:1019,41,0	1/1:5,7:11:18.06:431,18,0	1/1:2,11:14:33.01:735,33,0	1/1:4,12:17:27.09:626,27,0	1/1:6,11:18:21.07:503,21,0	1/1:6,10:17:27.09:647,27,0	1/1:6,23:30:72.18:1588,72,0	1/1:13,24:40:54.18:1294,54,0	1/1:5,10:15:15.05:360,15,0
chr10	46972344	.	CCA	C	20758.62	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-4.186;DP=610;FS=5.499;HRun=0;HaplotypeScore=84.5768;InbreedingCoeff=0.9956;MQ=77.14;MQ0=3;MQRankSum=-9.605;QD=36.10;ReadPosRankSum=5.316;VQSLOD=7.2820;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,42:45:99:1590,111,0	1/1:2,7:9:21.07:301,21,0	0/0:13,0:13:39.13:0,39,694	0/0:22,0:22:51.19:0,51,933	1/1:6,13:19:51.17:730,51,0	1/1:3,13:16:36.12:515,36,0	1/1:1,18:19:54.17:749,54,0	1/1:2,27:29:81.25:1135,81,0	1/1:1,17:18:45.15:644,45,0	1/1:2,27:28:81.27:1140,81,0	1/1:4,19:22:45.15:625,45,0	1/1:0,22:22:60.20:855,60,0	1/1:1,15:16:42.14:601,42,0	1/1:0,20:20:54.18:769,54,0	1/1:0,22:22:57.19:816,57,0	1/1:1,14:15:39.13:559,39,0	1/1:1,36:37:90.30:1289,90,0	1/1:0,11:11:21.07:301,21,0	1/1:1,14:15:42.14:602,42,0	1/1:6,17:22:54.13:732,54,0	1/1:1,42:43:99:1542,108,0	1/1:0,17:17:48.16:687,48,0	1/1:3,20:22:44.98:644,45,0	1/1:1,21:22:57.19:817,57,0	1/1:2,20:22:57.19:817,57,0	1/1:0,20:20:60.18:839,60,0	1/1:1,24:23:60.20:858,60,0	1/1:1,13:14:42.14:601,42,0
chr10	46972345	.	CA	C	3456.86	PASS	AB=1.000;AC=50;AF=0.893;AN=56;BaseQRankSum=6.557;DP=602;FS=1.954;HRun=1;HaplotypeScore=133.5453;InbreedingCoeff=0.6594;MQ=77.10;MQ0=3;MQRankSum=-8.324;QD=6.12;ReadPosRankSum=6.978;VQSLOD=0.6251;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:46,0:45:42.59:213,43,0	1/1:8,1:9:15.97:52,16,0	0/0:14,0:14:42.14:0,42,637	0/0:23,0:23:48.70:0,49,901	1/1:18,1:19:38.18:126,38,0	0/1:15,0:15:38.49:51,0,38	1/1:19,0:19:41.91:176,42,0	1/1:27,0:27:49.76:196,50,0	1/1:17,0:17:33.30:105,33,0	1/1:28,1:28:59.72:206,60,0	1/1:23,0:22:34.30:119,34,0	1/1:22,0:22:45.13:151,45,0	1/1:15,1:16:31.36:100,31,0	1/1:20,0:20:40.69:137,41,0	1/1:22,0:22:42.18:133,42,0	0/1:15,0:15:3.61:59,0,4	1/1:37,0:37:34.60:175,35,0	1/1:11,0:11:15.54:49,16,0	1/1:14,0:14:31.08:98,31,0	1/1:20,1:20:39.19:162,39,0	1/1:42,0:42:80.65:262,81,0	1/1:17,0:17:35.52:112,36,0	1/1:21,0:20:33.25:105,33,0	1/1:22,0:22:21.46:109,21,0	1/1:22,0:22:45.13:151,45,0	1/1:20,0:20:45.17:155,45,0	1/1:25,0:23:45.17:155,45,0	1/1:14,0:14:31.46:100,31,0
chr10	46972347	.	CA	C	2681.08	PASS	AB=1.000;AC=50;AF=0.893;AN=56;BaseQRankSum=6.916;DP=593;FS=10.062;HRun=1;HaplotypeScore=134.9649;InbreedingCoeff=0.5937;MQ=77.41;MQ0=3;MQRankSum=-8.093;QD=4.84;ReadPosRankSum=8.076;VQSLOD=-0.4737;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:43,0:42:43.71:180,44,0	1/1:7,1:8:14.44:42,14,0	0/0:16,0:16:48.15:0,48,720	0/0:23,0:23:61.72:0,62,892	1/1:17,2:19:5.01:114,5,0	1/1:13,0:13:25:74,25,0	1/1:19,0:19:27.69:105,28,0	1/1:27,0:27:56.34:193,56,0	1/1:18,0:18:13.65:67,14,0	1/1:29,1:29:11.17:101,11,0	1/1:19,1:19:29.74:107,30,0	1/1:22,0:22:39.59:112,40,0	1/1:15,1:16:30.19:100,30,0	1/1:20,0:20:35.52:101,36,0	1/1:22,0:22:38.70:110,39,0	1/1:14,0:14:26.48:75,26,0	1/1:36,0:36:61.11:174,61,0	0/1:12,0:12:18.21:23,0,18	1/1:14,0:14:31.11:112,31,0	0/1:22,0:21:8.68:52,0,9	1/1:42,0:42:71.76:206,72,0	1/1:17,0:17:33.32:110,33,0	1/1:20,0:19:31.40:98,31,0	1/1:21,0:21:38.70:110,39,0	1/1:21,0:21:38.70:110,39,0	1/1:20,0:20:29.37:127,29,0	1/1:24,0:22:42.55:141,43,0	1/1:14,0:14:28.30:81,28,0
chr10	46972439	.	CT	C	3233.06	PASS	AB=0.745;AC=27;AF=0.482;AN=56;BaseQRankSum=-3.519;DP=576;FS=0.823;HRun=14;HaplotypeScore=77.6019;InbreedingCoeff=0.5042;MQ=67.80;MQ0=2;MQRankSum=-1.450;QD=8.27;ReadPosRankSum=4.211;VQSLOD=3.0663;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:35:65.01:0,65,591	0/0:8,0:10:10.29:0,10,143	0/1:16,0:14:0.14:0,0,121	0/0:7,0:4:0:0,0,0	0/1:9,22:32:28.19:254,0,28	0/0:6,0:16:4.85:0,5,51	0/0:13,0:18:39.67:0,40,238	1/1:16,14:31:12.91:216,13,0	0/0:13,1:14:12.19:0,12,224	0/1:15,5:21:3.09:110,0,3	0/1:3,6:11:3.18:102,0,3	0/0:14,1:15:6.43:0,6,194	0/0:21,0:20:41.76:0,42,338	1/1:10,12:23:34.43:234,34,0	0/1:17,1:18:0.77:1,0,256	1/1:7,10:19:34.29:231,34,0	1/1:15,24:40:70.11:476,70,0	1/1:4,5:9:16.89:109,17,0	1/1:10,15:25:21.51:279,22,0	1/1:15,7:24:8.75:187,9,0	1/1:12,15:29:51.53:339,52,0	0/0:11,1:12:6.40:0,6,191	0/0:18,0:18:33.79:0,34,284	0/0:16,1:19:4.64:0,5,226	0/1:14,10:26:10.20:208,0,10	0/1:11,11:22:21.19:169,0,21	1/1:10,13:24:27.68:324,28,0	1/1:2,11:13:10.36:183,10,0
chr10	46973271	.	TTCTTTTTC	T	8324.23	PASS	AB=0.994;AC=37;AF=0.661;AN=56;BaseQRankSum=9.697;DP=463;FS=1.041;HRun=0;HaplotypeScore=136.7804;InbreedingCoeff=-0.3406;MQ=58.82;MQ0=9;MQRankSum=-5.390;QD=18.79;ReadPosRankSum=9.901;VQSLOD=2.7964;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:25,2:27:2.86:639,3,0	1/1:7,0:7:15.05:292,15,0	0/0:20,0:12:29.32:0,29,542	0/1:16,0:8:26.79:27,0,201	0/1:30,0:30:27.80:513,0,28	1/1:19,1:20:5.24:742,5,0	0/1:13,0:13:11.68:140,0,12	0/1:19,0:19:47.78:239,0,48	0/1:11,0:10:9.70:175,0,10	0/1:27,0:26:99:350,0,209	1/1:10,0:9:13.68:142,14,0	0/1:20,0:20:63.55:291,0,64	0/1:15,2:17:48.77:333,0,49	0/1:21,0:20:17.09:423,0,17	0/1:17,0:17:3.02:360,0,3	0/1:15,0:15:30.87:293,0,31	0/1:25,0:25:59.78:522,0,60	0/1:12,0:12:5.42:5,0,16	0/1:18,0:17:46.17:46,0,150	0/1:20,0:19:1.83:585,0,2	1/1:4,0:4:3.48:57,3,0	0/1:5,0:5:24.99:25,0,45	1/1:19,1:20:16.75:595,17,0	1/1:10,0:10:6.48:120,6,0	1/1:18,0:18:15.20:231,15,0	1/1:19,0:19:32.31:504,32,0	0/1:16,0:16:16.61:337,0,17	1/1:6,0:6:18.06:337,18,0
chr10	46973273	.	CTTTTTCTTT	C	12751.38	PASS	AB=0.848;AC=47;AF=0.839;AN=56;BaseQRankSum=1.071;DP=464;FS=6.655;HRun=0;HaplotypeScore=130.2405;InbreedingCoeff=0.0613;MQ=54.73;MQ0=9;MQRankSum=-1.092;QD=28.59;ReadPosRankSum=6.335;VQSLOD=3.2941;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:19,2:28:1.14:627,0,1	1/1:0,1:7:15.05:277,15,0	0/0:18,0:10:23.72:0,24,434	0/1:16,0:8:13.43:13,0,164	1/1:2,25:29:59.84:1012,60,0	1/1:10,1:21:24.87:693,25,0	0/1:10,0:12:8.61:229,0,9	1/1:16,3:20:43.44:593,43,0	0/1:8,2:10:16.18:332,0,16	0/1:8,17:24:64.14:728,0,64	1/1:3,7:9:13.47:241,13,0	1/1:5,1:20:14.96:274,15,0	1/1:5,0:17:15.05:256,15,0	1/1:4,16:21:24.55:668,25,0	1/1:1,0:16:18.06:315,18,0	1/1:13,4:18:41.94:655,42,0	1/1:17,9:26:54.41:1017,54,0	1/1:1,10:11:2.97:21,3,0	0/1:15,1:15:32.88:264,0,33	1/1:8,10:19:53.80:1088,54,0	1/1:0,1:4:5.98:92,6,0	0/1:5,0:5:25.06:25,0,30	1/1:3,3:21:17.98:623,18,0	1/1:8,0:10:3.72:203,4,0	1/1:1,16:18:20.88:405,21,0	1/1:1,15:18:49.14:903,49,0	1/1:12,6:18:41.92:743,42,0	1/1:0,5:7:18.06:455,18,0
chr10	46973279	.	CTT	C	2277.89	PASS	AB=0.889;AC=45;AF=0.804;AN=56;BaseQRankSum=5.165;DP=451;FS=1.933;HRun=16;HaplotypeScore=117.0751;InbreedingCoeff=0.3491;MQ=47.00;MQ0=13;MQRankSum=-3.107;QD=5.58;ReadPosRankSum=4.902;VQSLOD=0.2042;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:27,2:29:39.17:268,39,0	1/1:7,0:7:14.29:75,14,0	0/0:17,0:9:14.98:0,15,143	0/0:13,0:5:3.01:0,3,40	1/1:29,1:29:27.74:127,28,0	1/1:17,2:19:24.57:185,25,0	1/1:10,1:11:8.72:58,9,0	1/1:15,1:17:16.90:92,17,0	1/1:14,0:13:17.01:94,17,0	0/1:21,0:20:14.97:70,0,15	1/1:8,1:8:11.06:60,11,0	1/1:18,0:18:14.09:73,14,0	1/1:14,0:14:14.46:77,14,0	1/1:20,0:19:22.38:104,22,0	1/1:15,0:15:17.53:99,18,0	1/1:14,0:17:26.19:115,26,0	1/1:26,0:25:31.04:143,31,0	0/0:13,0:12:5.37:0,5,35	0/1:11,1:13:5.79:47,0,6	1/1:22,0:21:33.83:155,34,0	1/1:4,0:4:2.78:13,3,0	0/1:3,1:5:11.53:29,0,12	1/1:21,1:21:28:148,28,0	1/1:10,0:11:6.50:55,6,0	1/1:17,0:18:13.84:62,14,0	1/1:18,0:18:24.39:117,24,0	0/1:17,0:19:1.83:92,0,2	0/1:8,0:8:3.50:65,0,4
chr10	46974003	.	T	TC	2294.93	PASS	AB=0.956;AC=35;AF=0.625;AN=56;BaseQRankSum=4.993;DP=395;FS=14.244;HRun=0;HaplotypeScore=356.7261;InbreedingCoeff=0.1047;MQ=80.36;MQ0=0;MQRankSum=-5.737;QD=6.93;ReadPosRankSum=2.829;VQSLOD=2.1500;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:22,4:26:34.05:241,34,0	0/0:6,0:6:4.45:0,4,11	0/0:18,0:18:53.60:0,54,606	0/0:15,0:16:37.54:0,38,416	0/0:8,0:8:0.83:0,1,15	0/1:14,2:17:45.46:48,0,45	0/1:15,2:17:3.95:97,0,4	0/1:27,3:30:81.67:116,0,82	1/1:18,0:18:53.27:408,53,0	0/1:10,0:10:0.96:1,0,41	1/1:4,4:8:3.01:36,3,0	1/1:9,2:11:32.65:252,33,0	1/1:22,0:22:62.31:410,62,0	0/0:15,1:16:10.72:0,11,70	0/1:20,0:20:8.08:97,0,8	1/1:15,0:15:0.34:85,0,0	0/1:8,0:8:1.45:48,0,1	0/1:5,0:5:0.17:0,0,1	0/1:14,1:15:6.66:79,0,7	1/1:12,1:13:3.45:56,3,0	1/1:14,0:14:1.58:26,2,0	1/1:7,0:7:5.65:52,6,0	1/1:8,0:8:14.67:110,15,0	1/1:12,0:12:9.17:63,9,0	0/1:15,0:15:17.49:25,0,17	0/1:11,1:12:27.04:48,0,27	0/1:19,0:19:47.98:72,0,48	1/1:7,2:9:1.94:84,2,0
chr10	46974528	.	TG	T	217.83	PASS	AB=0.989;AC=21;AF=0.375;AN=56;BaseQRankSum=11.970;DP=489;FS=2.302;HRun=1;HaplotypeScore=172.5026;InbreedingCoeff=-0.3728;MQ=62.87;MQ0=0;MQRankSum=-16.196;QD=0.66;ReadPosRankSum=5.059;VQSLOD=-0.5698;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:28:10.81:11,0,55	0/0:5,0:5:5.15:0,5,39	0/0:11,0:10:0.62:0,1,127	0/1:12,0:10:4.01:4,0,151	0/1:27,0:26:27.48:27,0,106	1/1:10,0:10:5.67:24,6,0	0/1:21,0:21:9.25:9,0,68	0/0:33,1:34:35.91:0,36,311	0/1:13,1:14:10.23:57,0,10	0/0:22,0:21:13.13:0,13,134	0/1:22,0:22:22.09:22,0,40	0/1:14,1:15:14.56:15,0,81	0/1:15,0:15:10.84:11,0,49	0/1:11,0:11:3.58:4,0,29	0/1:17,0:17:6.87:7,0,54	0/1:19,1:20:28.52:29,0,112	0/1:25,1:26:21.77:34,0,22	0/0:6,0:6:3.55:0,4,17	0/0:34,1:35:20.87:0,21,243	0/1:17,0:17:8.58:9,0,36	0/1:7,0:7:3.51:11,0,4	0/1:7,0:7:4.32:4,0,10	0/1:13,0:13:11.72:12,0,48	0/1:12,0:12:19.11:19,0,51	0/0:20,0:19:22.18:0,22,150	0/0:25,0:25:31.52:0,32,174	0/1:27,0:27:32.23:32,0,62	0/1:8,0:8:4.92:27,0,5
chr10	46974535	.	ATC	A	1549.12	PASS	AB=0.833;AC=8;AF=0.143;AN=56;BaseQRankSum=0.857;DP=479;FS=1.988;HRun=0;HaplotypeScore=182.4333;InbreedingCoeff=0.7391;MQ=56.57;MQ0=1;MQRankSum=-2.751;QD=26.26;ReadPosRankSum=2.293;VQSLOD=4.6670;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:30:74.87:0,75,850	0/1:1,1:4:6.28:87,0,6	0/1:11,0:8:11.90:12,0,125	0/0:10,0:7:13.54:0,14,163	0/0:24,0:24:64.21:0,64,710	1/1:1,8:10:30.09:397,30,0	1/1:6,13:19:57.14:739,57,0	0/0:30,0:30:78.69:0,79,1021	0/0:13,0:13:32.31:0,32,396	0/0:22,0:21:50.85:0,51,567	0/0:23,0:23:66.11:0,66,723	0/0:16,0:17:47.43:0,47,493	0/0:16,0:17:44.98:0,45,472	0/0:12,0:12:30.08:0,30,383	1/1:5,9:15:39.01:467,39,0	0/0:16,0:17:50.52:0,51,516	0/0:27,0:27:66.59:0,67,701	0/0:7,0:7:17.99:0,18,212	0/0:32,0:32:89.50:0,89,912	0/0:17,0:17:50.95:0,51,577	0/0:8,0:8:20.92:0,21,200	0/0:8,0:8:24.01:0,24,256	0/0:12,0:12:35.94:0,36,408	0/0:12,0:11:23.75:0,24,234	0/0:19,0:18:51.08:0,51,566	0/0:25,0:25:71.86:0,72,784	0/0:26,0:26:62.45:0,62,740	0/0:9,0:10:29.91:0,30,293
chr10	46974537	.	C	CT	4566.21	PASS	AB=0.792;AC=42;AF=0.750;AN=56;BaseQRankSum=-4.334;DP=508;FS=2.073;HRun=13;HaplotypeScore=189.0835;InbreedingCoeff=0.4409;MQ=56.67;MQ0=1;MQRankSum=-0.016;QD=10.45;ReadPosRankSum=-2.181;VQSLOD=1.8289;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,2:31:47.63:291,48,0	0/1:6,0:6:3.63:8,0,4	0/0:11,0:8:0.83:0,1,13	0/0:10,0:8:2.07:0,2,20	1/1:15,11:27:5.08:149,5,0	0/0:12,0:12:18.47:0,18,54	0/0:20,0:20:30.58:0,31,91	0/1:21,12:33:16.28:276,0,16	1/1:8,0:16:34.76:205,35,0	1/1:9,10:22:8.30:218,8,0	1/1:8,14:24:56.52:441,57,0	1/1:11,1:16:35.02:240,35,0	1/1:13,1:18:29.31:198,29,0	1/1:9,5:14:21.36:170,21,0	0/0:17,0:17:18.90:0,19,55	1/1:10,7:17:27.39:262,27,0	1/1:15,10:27:16.13:265,16,0	1/1:5,2:7:8.98:74,9,0	1/1:19,11:32:23.39:358,23,0	0/1:10,7:18:8.20:136,0,8	1/1:5,4:9:2.99:24,3,0	1/1:5,0:8:11.72:74,12,0	1/1:10,1:14:2.95:91,3,0	1/1:3,2:11:17.20:112,17,0	0/1:12,8:19:2.16:195,0,2	1/1:15,8:24:32.18:320,32,0	1/1:13,11:28:3.74:324,4,0	1/1:6,5:11:0.39:135,0,0
chr10	46974836	.	CT	C	16406	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-8.228;DP=656;FS=9.550;HRun=5;HaplotypeScore=82.4043;InbreedingCoeff=0.9937;MQ=84.09;MQ0=3;MQRankSum=-6.345;QD=29.45;ReadPosRankSum=8.393;VQSLOD=3.6719;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,47:47:99:1326,117,0	1/1:0,7:7:18.05:204,18,0	0/0:47,0:36:87.32:0,87,963	0/0:50,0:30:62.66:0,63,758	1/1:1,25:26:72.20:813,72,0	1/1:1,21:22:60.17:680,60,0	1/1:0,18:18:48.14:544,48,0	1/1:3,32:35:93.15:1017,93,0	1/1:1,17:18:39.11:442,39,0	1/1:0,15:15:45.13:510,45,0	1/1:1,19:20:54.15:608,54,0	1/1:0,22:22:59.73:680,60,0	1/1:0,22:22:53.08:584,53,0	1/1:4,18:22:48.13:544,48,0	1/1:1,27:28:72.20:816,72,0	1/1:1,25:26:75.21:850,75,0	1/1:1,28:29:78.22:884,78,0	1/1:0,11:11:24.07:272,24,0	1/1:0,17:17:51.10:550,51,0	1/1:0,10:10:30.09:340,30,0	1/1:0,26:26:60.17:680,60,0	1/1:2,17:19:45.13:509,45,0	1/1:0,14:14:42.12:473,42,0	1/1:2,25:27:60.17:680,60,0	1/1:0,11:11:30.09:340,30,0	1/1:1,24:25:72.19:804,72,0	1/1:2,29:31:84.24:952,84,0	1/1:0,9:9:27.08:305,27,0
chr10	46976034	.	TA	T	3838.94	PASS	AB=0.595;AC=28;AF=0.500;AN=56;BaseQRankSum=5.499;DP=489;FS=6.637;HRun=14;HaplotypeScore=78.8085;InbreedingCoeff=0.7954;MQ=62.57;MQ0=2;MQRankSum=0.751;QD=12.80;ReadPosRankSum=1.882;VQSLOD=3.7477;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:50.99:0,51,456	1/1:1,8:9:14.86:103,15,0	0/0:18,0:11:9.43:0,9,70	0/0:16,0:8:2.68:0,3,76	1/1:8,8:18:33.46:207,33,0	1/1:0,25:26:58.57:396,59,0	1/1:4,13:18:34.52:224,35,0	1/1:14,20:36:80.78:533,81,0	0/0:11,1:14:21.14:0,21,310	1/1:6,11:18:12.82:224,13,0	1/1:6,10:18:32.37:201,32,0	0/0:9,0:9:18.02:0,18,167	0/0:7,0:9:20.70:0,21,168	1/1:9,11:20:41.59:285,42,0	0/1:4,5:12:31.72:76,0,32	1/1:7,9:16:5.19:192,5,0	1/1:9,15:23:50.53:347,51,0	1/1:10,9:19:34.69:231,35,0	0/0:13,1:16:20.85:0,21,286	0/0:12,1:13:9.23:0,9,212	0/0:10,0:11:29.87:0,30,265	0/0:9,0:9:12.01:0,12,111	0/0:7,0:7:15.02:0,15,139	0/0:18,0:20:32.52:0,33,298	0/1:8,17:26:5.20:277,0,5	1/1:12,19:31:61.49:488,61,0	0/0:17,0:16:47.99:0,48,433	1/1:3,2:7:10.01:53,10,0
chr10	46976076	.	A	AT	7132.73	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-4.563;DP=482;FS=16.571;HRun=4;HaplotypeScore=58.7032;InbreedingCoeff=0.9747;MQ=83.54;MQ0=0;MQRankSum=-5.143;QD=33.64;ReadPosRankSum=0.880;VQSLOD=3.4286;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:66.19:0,66,748	0/0:8,0:8:21.06:0,21,238	0/0:22,0:22:62.87:0,63,707	0/0:12,0:11:30.09:0,30,340	1/1:5,19:24:51.13:674,51,0	0/0:16,0:16:36.10:0,36,407	0/0:19,0:19:57.15:0,57,637	1/1:2,33:35:90.29:1215,90,0	0/0:18,0:18:54.15:0,54,611	1/1:2,20:22:60.15:783,60,0	1/1:2,16:18:33.06:415,33,0	0/0:21,0:21:60.17:0,60,678	0/0:15,0:15:42.12:0,42,476	1/1:1,17:18:51.17:696,51,0	0/0:18,0:18:48.13:0,48,544	1/1:0,20:20:60.20:819,60,0	1/1:1,21:22:57.19:778,57,0	1/1:3,17:20:48.16:656,48,0	0/0:18,0:18:44.99:0,45,490	0/0:5,0:5:9.02:0,9,102	0/0:13,0:13:36.10:0,36,408	0/0:11,0:11:30.07:0,30,329	0/0:6,0:6:18.03:0,18,191	0/0:17,0:17:42.12:0,42,476	1/1:2,11:13:33.10:439,33,0	1/1:2,13:15:42.14:574,42,0	0/0:28,0:27:81.23:0,81,917	1/1:3,2:5:6.02:82,6,0
chr10	46977246	.	AC	A	6702.64	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-1.152;DP=438;FS=31.213;HRun=8;HaplotypeScore=88.0967;InbreedingCoeff=0.8738;MQ=81.23;MQ0=4;MQRankSum=-4.122;QD=18.02;ReadPosRankSum=5.485;VQSLOD=3.2735;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,13:13:21.02:203,21,0	1/1:3,2:5:9.01:87,9,0	0/0:32,0:22:39.95:0,40,428	0/0:33,0:28:52.52:0,53,660	1/1:1,3:3:9.01:87,9,0	1/1:7,9:16:33.05:318,33,0	1/1:0,22:22:48.07:463,48,0	1/1:9,18:26:51.03:492,51,0	1/1:3,12:15:27.04:259,27,0	1/1:4,9:13:27.04:269,27,0	1/1:2,11:13:21.04:210,21,0	1/1:6,8:14:21.02:203,21,0	1/1:5,9:14:24.02:230,24,0	1/1:3,12:15:26.32:261,26,0	1/1:6,26:32:60.07:579,60,0	1/1:3,20:23:48.08:467,48,0	1/1:2,13:15:30.05:290,30,0	1/1:3,9:12:24.04:241,24,0	1/1:6,8:14:30.02:280,30,0	1/1:3,4:7:8.93:86,9,0	1/1:3,18:21:32.19:317,32,0	1/1:1,6:7:11.87:115,12,0	1/1:1,8:9:17.95:173,18,0	1/1:5,15:20:14.65:144,15,0	1/1:2,6:8:15.02:145,15,0	1/1:3,8:11:27.02:269,27,0	1/1:5,8:13:29.99:277,30,0	1/1:0,9:9:24.04:236,24,0
chr10	46977284	.	GTCTCTGTCTCTC	G	1478.84	PASS	AB=0.987;AC=30;AF=0.536;AN=56;BaseQRankSum=1.894;DP=418;FS=4.671;HRun=0;HaplotypeScore=143.8654;InbreedingCoeff=0.0411;MQ=39.71;MQ0=46;MQRankSum=-0.141;QD=4.67;ReadPosRankSum=1.326;VQSLOD=1.9216;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:20,5:22:9.56:81,10,0	0/0:4,0:3:3.94:0,4,53	0/0:9,0:1:2.88:0,3,15	0/1:12,0:5:0.99:1,0,44	0/0:11,0:9:2.80:0,3,13	0/1:18,0:16:43.43:43,0,329	0/1:29,0:24:77.07:77,0,336	0/1:22,0:18:64.47:64,0,304	1/1:8,2:11:6.68:121,7,0	0/0:17,0:15:16.14:0,16,232	0/0:13,0:10:2.10:0,2,87	1/1:9,2:11:13.94:224,14,0	0/1:9,2:8:0.98:251,0,1	0/1:15,0:14:12.28:42,0,12	0/0:29,0:29:24.82:0,25,903	0/1:18,0:17:12.71:13,0,197	0/1:15,0:14:14.66:15,0,222	0/1:13,0:10:26.85:27,0,46	0/1:7,0:6:2.25:175,0,2	1/1:12,0:11:8.94:68,9,0	0/1:17,0:12:40.89:41,0,59	1/1:11,2:12:8.64:92,9,0	1/1:12,3:15:8.94:68,9,0	1/1:18,1:16:5.98:47,6,0	0/0:18,0:15:8.54:0,9,115	0/1:18,0:14:17.46:17,0,77	1/1:10,0:9:14.67:171,15,0	1/1:3,0:3:1.52:6,2,0
chr10	46977288	.	CTG	C	1095.26	PASS	AB=1.000;AC=30;AF=0.536;AN=56;BaseQRankSum=0.760;DP=421;FS=0.000;HRun=0;HaplotypeScore=109.8160;InbreedingCoeff=0.3684;MQ=39.20;MQ0=48;MQRankSum=0.336;QD=4.03;ReadPosRankSum=-2.096;VQSLOD=2.0138;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:23:10.05:82,10,0	0/1:4,0:3:4.10:4,0,18	0/0:8,0:1:2.88:0,3,15	0/1:9,0:3:0.82:1,0,44	0/0:11,0:9:2.80:0,3,13	1/1:17,2:17:23.16:202,23,0	1/1:29,2:25:26.50:199,27,0	0/0:22,0:18:37.85:0,38,302	0/1:12,0:12:30.68:60,0,31	0/0:18,0:16:11.35:0,11,202	0/0:14,0:10:6.92:0,7,47	1/1:12,0:11:14.33:127,14,0	1/1:13,0:8:17.26:128,17,0	0/0:15,0:14:4.63:0,5,38	0/0:27,0:27:24.38:0,24,337	0/1:16,0:15:3.34:3,0,98	0/1:18,0:17:24.65:25,0,82	0/1:13,0:10:1.63:2,0,40	0/1:7,0:6:33.88:43,0,34	1/1:12,0:11:8.94:68,9,0	0/1:19,0:14:6:41,0,6	1/1:12,0:11:8.94:68,9,0	1/1:17,0:15:8.94:68,9,0	1/1:18,1:16:5.65:47,6,0	0/0:18,0:15:8.95:0,9,65	0/0:16,0:13:7.76:0,8,63	1/1:10,0:9:14.20:98,14,0	1/1:3,0:3:2.59:11,3,0
chr10	46977290	.	GTCTCTCTC	G	2654.13	PASS	AB=0.955;AC=22;AF=0.500;AN=44;BaseQRankSum=-4.032;DP=425;FS=29.197;HRun=0;HaplotypeScore=126.8437;InbreedingCoeff=0.0376;MQ=38.55;MQ0=53;MQRankSum=0.222;QD=12.64;ReadPosRankSum=6.361;VQSLOD=0.8765;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:24:1.35:0,1,3	0/0:5,0:4:2.37:0,2,8	./.	./.	./.	0/0:20,0:16:18.50:0,19,294	0/0:33,0:27:16.48:0,16,279	1/1:22,0:18:14.97:195,15,0	0/0:12,0:12:0.08:0,0,11	0/1:18,1:18:74.55:288,0,75	1/1:10,0:7:6.02:154,6,0	0/1:13,0:11:17.38:36,0,17	0/1:13,0:8:15.29:93,0,15	0/1:13,2:15:5.90:189,0,6	0/0:26,0:26:15.52:0,16,449	0/1:15,0:15:23.61:210,0,24	0/1:18,1:17:59.24:133,0,59	0/1:13,0:9:5.18:388,0,5	0/1:7,0:6:40.08:75,0,40	./.	0/0:19,0:14:3.01:0,3,61	1/1:13,0:12:0.05:0,0,0	./.	./.	1/1:16,1:15:8.73:220,9,0	1/1:12,4:13:3.82:619,4,0	1/1:10,0:9:2.59:50,3,0	1/1:3,0:3:6.02:141,6,0
chr10	46977317	.	TCACACACACACACACA	T	232.99	PASS	AC=4;AF=0.083;AN=48;BaseQRankSum=0.418;DP=439;FS=0.000;HRun=0;HaplotypeScore=166.5569;InbreedingCoeff=0.4955;MQ=32.82;MQ0=56;MQRankSum=0.320;QD=8.63;ReadPosRankSum=0.582;VQSLOD=2.6302;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	1/1:3,2:4:6.02:198,6,0	./.	./.	0/0:13,0:12:5.54:0,6,347	0/0:15,0:12:15.05:0,15,916	0/0:29,0:22:10.89:0,11,346	0/0:18,0:15:14.97:0,15,603	0/0:13,0:13:9.03:0,9,488	0/0:21,0:19:44.98:0,45,2379	0/0:11,0:7:2.98:0,3,22	0/0:14,0:12:9.03:0,9,426	0/0:18,0:13:16.87:0,17,983	0/0:20,0:19:6.02:0,6,371	1/1:20,2:22:3.48:130,3,0	0/0:17,0:14:22.15:0,22,1226	0/0:22,0:19:21.07:0,21,1211	0/0:15,0:12:16.61:0,17,928	0/0:15,0:14:32.32:0,32,1466	0/0:7,0:6:6.02:0,6,287	0/0:15,0:10:3.01:0,3,155	0/0:15,0:14:5.69:0,6,384	./.	0/0:19,0:17:0:0,0,0	0/0:23,0:19:20.75:0,21,1094	0/0:22,0:17:35.22:0,35,1276	0/0:14,0:12:19.61:0,20,616	0/0:7,0:6:18.06:0,18,929
chr10	46982284	.	G	GTA	2509.25	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=13.339;DP=575;FS=0.000;HRun=0;HaplotypeScore=93.3104;InbreedingCoeff=0.9870;MQ=72.96;MQ0=1;MQRankSum=-13.576;QD=30.98;ReadPosRankSum=2.333;VQSLOD=5.3189;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,99,1546	0/0:4,0:4:12.04:0,12,196	0/0:26,0:25:72.22:0,72,1132	0/0:16,0:15:42.13:0,42,623	0/0:20,0:20:57.17:0,57,898	0/0:18,0:18:54.17:0,54,858	0/0:20,0:20:60.20:0,60,978	0/0:22,0:22:66.23:0,66,1069	0/0:24,0:24:72.25:0,72,1173	0/0:20,0:20:54.18:0,54,859	0/0:18,0:18:51.16:0,51,807	0/0:24,0:24:72.22:0,72,1127	0/0:19,0:19:54.18:0,54,879	0/0:15,0:15:45.15:0,45,724	0/0:24,0:23:72.23:0,72,1150	0/0:22,0:22:63.22:0,63,1028	0/0:42,0:42:99:0,126,2050	0/0:23,0:23:66.23:0,66,1068	1/1:2,13:13:39.12:496,39,0	1/1:2,17:19:54.16:657,54,0	1/1:1,15:16:31.70:399,32,0	0/0:17,0:17:51.16:0,51,809	0/0:19,0:19:48.16:0,48,779	0/0:25,0:25:75.25:0,75,1196	0/0:14,0:14:42.12:0,42,636	0/0:22,0:22:66.22:0,66,1053	1/1:1,30:31:93.15:1117,93,0	0/0:5,0:5:15.05:0,15,244
chr10	46982286	.	C	CCA	3223.52	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=13.982;DP=601;FS=0.000;HRun=0;HaplotypeScore=97.4167;InbreedingCoeff=0.9870;MQ=70.93;MQ0=1;MQRankSum=-14.263;QD=31.92;ReadPosRankSum=1.532;VQSLOD=5.6317;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:90.31:0,90,1459	0/0:4,0:4:12.04:0,12,196	0/0:28,0:27:72.24:0,72,1150	0/0:16,0:15:42.14:0,42,665	0/0:21,0:21:57.18:0,57,894	0/0:17,0:17:51.17:0,51,832	0/0:21,0:21:63.20:0,63,999	0/0:23,0:23:66.23:0,66,1074	0/0:25,0:25:75.19:0,75,1146	0/0:21,0:21:63.13:0,63,946	0/0:19,0:19:54.17:0,54,852	0/0:23,0:23:66.23:0,66,1071	0/0:19,0:19:57.19:0,57,926	0/0:16,0:16:48.15:0,48,759	0/0:23,0:22:69.24:0,69,1121	0/0:22,0:22:66.23:0,66,1074	0/0:42,0:42:99:0,126,2056	0/0:22,0:22:63.21:0,63,1028	1/1:9,13:19:33.12:673,33,0	1/1:6,17:24:60.18:768,60,0	1/1:4,15:20:41.03:565,41,0	0/0:20,0:20:54.17:0,54,855	0/0:19,0:19:54.18:0,54,866	0/0:25,0:25:69.24:0,69,1120	0/0:13,0:13:39.12:0,39,605	0/0:23,0:23:63.19:0,63,964	1/1:4,31:35:99:1379,102,0	0/0:5,0:5:15.05:0,15,245
chr10	46983288	.	T	TA	6951.09	PASS	AC=44;AF=0.815;AN=54;BaseQRankSum=-2.645;DP=334;FS=1.473;HRun=0;HaplotypeScore=60.8354;InbreedingCoeff=0.8139;MQ=54.97;MQ0=2;MQRankSum=0.851;QD=23.97;ReadPosRankSum=3.946;VQSLOD=6.3525;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,16:21:16.01:442,16,0	0/0:6,0:6:14.54:0,15,85	0/0:6,0:3:6.41:0,6,60	./.	1/1:6,13:18:35.54:403,36,0	0/0:10,0:10:29.25:0,29,184	0/0:7,0:7:10.89:0,11,58	1/1:10,18:26:37.75:564,38,0	1/1:5,5:9:19.97:194,20,0	1/1:1,14:15:38.74:428,39,0	1/1:3,9:11:24.27:300,24,0	1/1:1,8:9:27.08:303,27,0	1/1:1,12:13:22.21:383,22,0	1/1:1,7:8:20.84:233,21,0	0/0:14,0:12:2.71:0,3,116	1/1:3,12:15:26.81:300,27,0	1/1:3,27:30:54.05:636,54,0	1/1:4,10:13:23.95:299,24,0	1/1:3,12:13:29.43:340,29,0	1/1:1,8:9:23.41:281,23,0	1/1:1,3:4:5.76:67,6,0	1/1:0,1:1:3.01:35,3,0	1/1:1,9:10:24.95:269,25,0	1/1:3,3:6:10.23:122,10,0	1/1:4,12:16:39.71:437,40,0	1/1:7,11:18:35.09:401,35,0	1/1:0,14:14:39.11:449,39,0	1/1:0,3:3:6.02:64,6,0
chr10	46983450	.	CAA	C	4758.04	PASS	AB=1.000;AC=49;AF=0.907;AN=54;BaseQRankSum=4.106;DP=278;FS=11.677;HRun=5;HaplotypeScore=120.8851;InbreedingCoeff=0.4606;MQ=31.33;MQ0=4;MQRankSum=-0.590;QD=18.37;ReadPosRankSum=2.609;VQSLOD=1.7864;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:15:13.96:178,14,0	1/1:2,6:8:18.03:221,18,0	0/0:7,0:3:6.02:0,6,109	0/0:8,0:3:9.03:0,9,155	1/1:11,7:16:24.03:299,24,0	1/1:19,0:17:47.94:424,48,0	./.	1/1:14,6:20:44.90:497,45,0	1/1:12,0:12:23.02:166,23,0	1/1:3,8:11:21.07:282,21,0	1/1:4,7:10:20.60:217,21,0	1/1:7,0:7:13.96:156,14,0	1/1:7,0:7:13.23:108,13,0	1/1:6,3:9:18.01:209,18,0	1/1:6,5:11:12.34:147,12,0	1/1:7,2:9:17.85:187,18,0	1/1:11,4:14:21.06:262,21,0	1/1:5,0:5:3:26,3,0	1/1:5,0:4:8.04:62,8,0	1/1:9,0:9:22.70:150,23,0	1/1:4,0:4:3:27,3,0	1/1:6,0:6:6.01:56,6,0	0/1:7,0:6:9.03:53,0,9	1/1:10,0:8:5.32:59,5,0	1/1:7,7:14:35.84:395,36,0	1/1:4,5:9:21:238,21,0	1/1:9,0:9:2.64:96,3,0	1/1:4,4:8:20.90:244,21,0
chr10	46983452	.	A	AAC	4246.60	PASS	AC=50;AF=0.926;AN=54;BaseQRankSum=1.873;DP=280;FS=21.630;HRun=0;HaplotypeScore=132.2184;InbreedingCoeff=0.5917;MQ=31.12;MQ0=4;MQRankSum=-1.282;QD=15.96;ReadPosRankSum=3.258;VQSLOD=2.8394;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:15:36.99:252,37,0	1/1:7,1:8:21.02:193,21,0	0/0:6,0:3:6.02:0,6,91	0/0:7,0:3:9.03:0,9,137	1/1:15,3:16:26.39:190,26,0	1/1:19,0:17:52.55:363,53,0	./.	1/1:10,10:20:49.27:623,49,0	1/1:12,0:12:28.02:201,28,0	1/1:13,0:13:27.56:198,28,0	1/1:12,0:11:21.02:187,21,0	1/1:7,0:7:19.91:108,20,0	1/1:7,0:7:11.48:92,11,0	1/1:5,5:10:20.39:228,20,0	1/1:9,2:11:1.88:168,2,0	1/1:4,4:8:9.29:102,9,0	1/1:12,4:15:8.33:180,8,0	1/1:4,1:5:0.89:2,1,0	1/1:5,0:4:6.94:47,7,0	1/1:9,0:9:12.76:94,13,0	1/1:4,0:4:5.81:32,6,0	1/1:6,0:6:5.83:33,6,0	1/1:7,0:6:12.46:89,12,0	1/1:10,0:8:11.20:88,11,0	1/1:14,2:16:34.57:282,35,0	1/1:7,3:10:22.01:194,22,0	1/1:9,0:9:12.53:97,13,0	1/1:5,3:8:19.87:203,20,0
chr10	46983453	.	A	AC	2584.70	PASS	AB=0.974;AC=45;AF=0.833;AN=54;BaseQRankSum=1.641;DP=267;FS=50.847;HRun=0;HaplotypeScore=134.8918;InbreedingCoeff=0.3860;MQ=31.10;MQ0=4;MQRankSum=-1.129;QD=10.34;ReadPosRankSum=3.301;VQSLOD=1.4738;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:15:39.88:266,40,0	1/1:9,0:9:17.33:75,17,0	0/0:7,0:3:6.02:0,6,84	0/0:6,0:3:9.03:0,9,124	1/1:16,0:15:21.36:109,21,0	1/1:18,0:16:50.29:359,50,0	./.	1/1:18,0:18:41.86:253,42,0	1/1:11,1:12:32.43:211,32,0	0/1:10,0:10:2.03:43,0,2	0/1:11,1:11:7.85:49,0,8	1/1:7,0:7:20.39:133,20,0	1/1:4,3:7:6.55:98,7,0	1/1:10,0:10:18.70:126,19,0	1/1:9,0:9:9.98:40,10,0	1/1:8,0:8:6.48:56,6,0	1/1:13,0:13:6.85:100,7,0	0/0:4,0:4:2.97:0,3,20	1/1:7,0:6:7.97:39,8,0	1/1:9,1:10:18.88:119,19,0	1/1:3,0:3:2.68:11,3,0	1/1:2,4:6:5.94:41,6,0	1/1:6,0:6:0.27:82,0,0	1/1:10,0:8:14.65:85,15,0	1/1:15,1:16:3.24:121,3,0	0/1:10,0:10:0.66:77,0,1	1/1:9,0:9:20.21:89,20,0	1/1:7,1:8:18.64:131,19,0
chr10	46983455	.	AT	A	2805.85	PASS	AC=50;AF=0.926;AN=54;BaseQRankSum=3.978;DP=258;FS=3.218;HRun=1;HaplotypeScore=129.9687;InbreedingCoeff=0.6153;MQ=31.25;MQ0=4;MQRankSum=-2.186;QD=11.55;ReadPosRankSum=2.975;VQSLOD=2.4147;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,4:15:34.37:223,34,0	1/1:8,0:8:17.58:103,18,0	0/0:6,1:4:9.03:0,9,120	0/0:8,0:4:12.04:0,12,162	1/1:14,0:13:20.02:85,20,0	1/1:3,15:16:49.09:384,49,0	./.	1/1:17,0:17:43.10:251,43,0	1/1:6,3:10:26.49:171,26,0	1/1:10,0:10:19.21:85,19,0	1/1:10,2:11:18.26:107,18,0	1/1:1,6:7:15.76:141,16,0	1/1:2,4:6:14.58:108,15,0	1/1:9,0:9:17.06:95,17,0	1/1:9,0:9:1.16:58,1,0	1/1:6,2:8:17.29:100,17,0	1/1:9,2:11:19.88:104,20,0	1/1:5,0:5:2.79:18,3,0	1/1:5,2:6:7.70:54,8,0	1/1:3,6:10:22.21:135,22,0	1/1:2,1:3:2.99:24,3,0	1/1:3,2:5:5.99:50,6,0	1/1:4,2:6:16.91:104,17,0	1/1:7,2:7:12.06:75,12,0	1/1:16,0:16:26.36:165,26,0	1/1:10,0:10:15.88:69,16,0	1/1:5,4:9:15.34:113,15,0	1/1:8,0:8:19.88:104,20,0
chr10	46983459	.	AT	A	2378.20	PASS	AB=1.000;AC=47;AF=0.870;AN=54;BaseQRankSum=4.871;DP=267;FS=15.666;HRun=1;HaplotypeScore=132.7889;InbreedingCoeff=0.4292;MQ=30.13;MQ0=4;MQRankSum=-1.813;QD=9.40;ReadPosRankSum=3.551;VQSLOD=0.1414;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,5:14:33.17:213,33,0	1/1:8,0:8:17.76:80,18,0	0/0:6,0:4:9.03:0,9,138	0/0:8,0:4:12.01:0,12,159	1/1:16,1:16:20.22:76,20,0	1/1:3,15:16:46.01:339,46,0	./.	1/1:17,0:17:35.19:192,35,0	1/1:5,4:10:27.01:178,27,0	0/1:11,0:11:13.80:14,0,21	1/1:11,2:12:13.50:93,13,0	1/1:1,6:7:13.55:126,14,0	1/1:1,4:5:11.76:82,12,0	1/1:11,0:11:16.72:102,17,0	1/1:9,0:9:10.10:54,10,0	1/1:9,1:10:17.30:83,17,0	1/1:9,1:10:7.14:32,7,0	0/1:4,0:4:3.03:3,0,35	1/1:9,2:10:22.85:127,23,0	1/1:7,5:13:32.21:191,32,0	1/1:3,1:4:2.98:22,3,0	1/1:3,2:5:5.98:46,6,0	1/1:4,2:6:14.40:89,14,0	1/1:6,2:6:11.31:62,11,0	1/1:15,0:15:6.42:80,6,0	0/1:9,0:9:15.45:26,0,15	1/1:5,4:9:18.53:122,19,0	1/1:8,0:8:16.67:86,17,0
chr10	46983463	.	AT	A	3386.93	PASS	AB=1.000;AC=49;AF=0.907;AN=54;BaseQRankSum=4.485;DP=277;FS=7.199;HRun=1;HaplotypeScore=134.1582;InbreedingCoeff=0.6233;MQ=32.20;MQ0=1;MQRankSum=-3.096;QD=12.83;ReadPosRankSum=1.851;VQSLOD=2.4388;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,4:13:30.10:198,30,0	1/1:1,0:7:20.52:122,21,0	0/0:6,0:4:9.03:0,9,138	0/0:7,0:4:12.04:0,12,173	1/1:22,1:22:38.77:211,39,0	1/1:3,14:17:48.65:366,49,0	./.	1/1:14,0:14:26.68:138,27,0	1/1:6,4:10:26.63:181,27,0	1/1:11,2:13:3.75:41,4,0	1/1:10,3:12:16.43:134,16,0	1/1:1,6:7:20.88:156,21,0	1/1:1,4:5:11.91:88,12,0	1/1:9,3:12:20.86:181,21,0	1/1:3,0:8:14.70:89,15,0	1/1:9,1:10:23.88:127,24,0	1/1:13,0:12:11.42:56,11,0	0/1:4,0:4:2.48:2,0,37	1/1:5,5:11:25.28:259,25,0	1/1:2,8:14:30.89:315,31,0	1/1:0,4:5:5.96:45,6,0	1/1:3,2:5:5.98:46,6,0	1/1:5,2:7:3.63:87,4,0	1/1:5,2:7:13.29:71,13,0	1/1:14,2:16:16.86:119,17,0	1/1:12,0:12:13.52:95,14,0	1/1:4,0:8:19.11:146,19,0	1/1:7,1:8:17.90:113,18,0
chr10	46983467	.	ATAAAT	A	4869.61	PASS	AB=0.947;AC=42;AF=0.778;AN=54;BaseQRankSum=-2.540;DP=265;FS=4.146;HRun=0;HaplotypeScore=140.7786;InbreedingCoeff=0.2980;MQ=42.53;MQ0=1;MQRankSum=-1.280;QD=20.37;ReadPosRankSum=-2.698;VQSLOD=4.2121;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:4,4:8:22.05:305,22,0	1/1:6,0:7:21.07:418,21,0	0/0:8,0:6:18.06:0,18,388	0/0:6,0:4:12.04:0,12,317	1/1:21,0:20:6.15:158,6,0	1/1:3,14:16:44.96:734,45,0	./.	0/0:12,0:12:1.77:0,2,6	1/1:5,3:8:18.53:301,19,0	0/1:15,0:15:8:8,0,31	1/1:13,0:12:10.50:134,11,0	1/1:4,6:10:25.41:333,25,0	1/1:2,4:6:13.81:189,14,0	1/1:9,0:9:18.33:145,18,0	1/1:5,0:9:15.05:255,15,0	1/1:7,1:8:12.81:116,13,0	0/1:13,0:12:8.05:39,0,8	0/1:4,0:4:8.92:9,0,16	1/1:10,0:10:24.37:277,24,0	1/1:15,1:16:36.53:480,37,0	1/1:5,0:5:6.45:74,6,0	1/1:1,2:3:9:123,9,0	0/1:7,2:9:5.54:135,0,6	1/1:6,2:8:10.42:109,10,0	0/1:14,0:15:7.95:119,0,8	0/1:12,0:13:7.98:83,0,8	1/1:7,0:7:18.02:262,18,0	1/1:5,0:5:7.34:62,7,0
chr10	46983475	.	A	AG	4073.11	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=3.317;DP=314;FS=17.862;HRun=0;HaplotypeScore=127.6784;InbreedingCoeff=0.8121;MQ=60.09;MQ0=0;MQRankSum=-4.742;QD=13.90;ReadPosRankSum=1.906;VQSLOD=4.1058;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,5:14:23.95:234,24,0	1/1:7,0:7:20.07:106,20,0	0/0:15,0:13:39.08:0,39,480	0/0:6,0:5:12.03:0,12,154	1/1:20,1:20:41.97:268,42,0	1/1:17,0:16:47.45:359,47,0	1/1:6,0:6:11.95:93,12,0	1/1:14,1:15:13.87:143,14,0	1/1:9,0:9:23.41:171,23,0	1/1:16,2:18:18.45:136,18,0	1/1:12,1:13:14.48:140,14,0	1/1:13,0:13:37.52:274,38,0	1/1:8,0:8:20.34:137,20,0	1/1:6,1:7:12.25:60,12,0	1/1:12,0:12:23.12:164,23,0	1/1:9,0:9:11.68:92,12,0	1/1:12,1:12:23.45:141,23,0	1/1:2,0:2:1.82:5,2,0	1/1:11,0:12:28.57:186,29,0	1/1:18,0:18:37.38:194,37,0	1/1:8,0:8:14.69:119,15,0	1/1:5,0:5:14.92:113,15,0	1/1:9,0:9:23.26:186,23,0	1/1:2,7:10:11.88:109,12,0	1/1:14,1:15:25.23:169,25,0	1/1:14,0:14:21.03:228,21,0	1/1:8,0:8:17.67:90,18,0	1/1:9,0:9:22.63:156,23,0
chr10	46984323	.	A	AAAGT	11576.93	PASS	AB=1.000;AC=16;AF=0.286;AN=56;BaseQRankSum=-11.370;DP=652;FS=2.928;HRun=0;HaplotypeScore=100.1928;InbreedingCoeff=0.8292;MQ=61.20;MQ0=0;MQRankSum=-4.786;QD=57.31;ReadPosRankSum=2.015;VQSLOD=6.5076;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,38:48:99:2548,105,0	0/0:16,0:16:48.16:0,48,889	0/1:13,0:13:11.35:11,0,132	0/1:12,0:10:33.81:34,0,182	0/0:29,0:29:84.27:0,84,1529	0/0:23,0:23:66.22:0,66,1194	0/0:21,0:21:60.21:0,60,1119	0/0:38,0:38:99:0,99,1841	1/1:2,20:23:57.20:1509,57,0	0/0:23,0:23:69.24:0,69,1288	0/0:28,0:28:81.27:0,81,1471	1/1:3,22:25:63.22:1678,63,0	1/1:1,23:24:72.25:1917,72,0	0/0:21,0:21:63.22:0,63,1164	0/0:24,0:24:66.21:0,66,1201	0/0:20,0:20:57.20:0,57,1060	0/0:22,0:22:66.23:0,66,1232	0/0:21,0:21:48.14:0,48,836	0/0:21,0:21:30.80:0,31,971	0/0:31,0:31:84.27:0,84,1530	0/0:38,0:38:99:0,105,1901	1/1:4,12:15:39.13:1015,39,0	1/1:4,20:24:69.20:1737,69,0	1/1:2,14:17:45.11:1128,45,0	0/0:27,0:27:75.26:0,75,1395	0/0:19,0:19:54.17:0,54,974	0/0:20,0:20:60.14:0,60,1012	0/0:8,0:8:18.06:0,18,336
chr10	46985780	.	C	CA	8201.43	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-15.433;DP=641;FS=1.759;HRun=8;HaplotypeScore=58.5960;InbreedingCoeff=0.9975;MQ=69.44;MQ0=1;MQRankSum=-0.685;QD=29.50;ReadPosRankSum=0.506;VQSLOD=5.0182;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:96.03:0,96,872	0/0:11,0:11:33.02:0,33,302	0/0:22,0:19:24.10:0,24,261	0/0:16,0:15:16.37:0,16,200	1/1:4,27:32:87.09:982,87,0	0/0:21,0:21:59.63:0,60,531	0/0:20,0:20:48.01:0,48,439	1/1:3,31:34:93.28:1073,93,0	0/0:19,1:20:22.41:0,22,460	1/1:3,19:22:57.17:657,57,0	1/1:7,14:21:39.12:449,39,0	0/0:16,0:16:45.01:0,45,407	0/0:21,0:21:53.98:0,54,483	1/1:2,26:28:69.21:797,69,0	0/0:26,0:26:69.03:0,69,631	1/1:1,24:25:63.19:727,63,0	1/1:0,19:19:57.17:658,57,0	1/1:3,21:24:57.17:658,57,0	0/0:35,0:35:83.97:0,84,768	0/0:22,0:22:54.02:0,54,494	0/0:16,0:16:38.94:0,39,347	0/0:18,0:18:41.50:0,42,366	0/0:21,0:21:60.03:0,60,548	0/0:20,0:20:41.81:0,42,384	1/1:4,20:24:60.18:689,60,0	1/1:3,29:32:87.24:992,87,0	0/0:25,0:25:72.04:0,72,659	1/1:1,16:17:45.61:520,46,0
chr10	46987056	.	CTGTG	C	4321.14	PASS	AB=0.744;AC=47;AF=0.870;AN=54;BaseQRankSum=2.690;DP=591;FS=2.402;HRun=0;HaplotypeScore=145.6514;InbreedingCoeff=0.2590;MQ=57.62;MQ0=6;MQRankSum=-1.144;QD=8.49;ReadPosRankSum=3.990;VQSLOD=3.9126;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:30.10:0,30,614	1/1:3,0:9:6.48:57,6,0	./.	0/0:27,0:14:2.68:0,3,11	0/1:15,7:23:40.79:41,0,58	1/1:10,0:17:20.98:195,21,0	1/1:11,0:16:3:28,3,0	1/1:33,0:33:2.55:27,3,0	1/1:10,3:15:15.04:215,15,0	1/1:14,6:20:21.02:265,21,0	1/1:7,4:12:9.02:122,9,0	1/1:9,10:21:27.08:403,27,0	0/1:7,9:18:46.75:271,0,47	1/1:8,0:18:12.96:114,13,0	1/1:8,0:18:9.15:84,9,0	1/1:15,6:21:12.04:187,12,0	1/1:21,2:36:10.43:107,10,0	1/1:15,5:22:17.96:243,18,0	1/1:12,0:15:3:28,3,0	1/1:14,0:18:6.01:56,6,0	0/1:40,0:47:22.54:23,0,47	1/1:5,0:7:12.02:131,12,0	1/1:10,6:17:11.97:158,12,0	1/1:17,9:26:27.09:421,27,0	1/1:6,10:16:20.93:259,21,0	1/1:21,6:28:17.60:233,18,0	1/1:7,0:16:21.02:195,21,0	1/1:5,12:17:30.10:459,30,0
chr10	46987861	.	CGACACGTATCCCG	C	2143.72	PASS	AB=0.762;AC=6;AF=0.107;AN=56;BaseQRankSum=8.936;DP=576;FS=6.065;HRun=0;HaplotypeScore=201.6047;InbreedingCoeff=-0.1300;MQ=53.80;MQ0=3;MQRankSum=-7.566;QD=17.86;ReadPosRankSum=2.441;VQSLOD=2.2926;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,99,5801	0/0:11,0:9:24.08:0,24,1351	0/0:5,0:3:5.10:0,5,172	0/0:7,0:3:6.02:0,6,277	0/0:13,0:13:36.12:0,36,2238	0/0:26,0:26:57.20:0,57,3492	0/0:25,0:25:72.24:0,72,4565	0/0:20,0:20:54.19:0,54,2177	0/1:10,4:14:99:371,0,1516	0/0:24,0:23:69.23:0,69,4113	0/0:10,0:10:30.10:0,30,1956	0/1:19,8:24:99:554,0,2859	0/1:16,10:25:99:877,0,1326	0/0:21,0:21:48.16:0,48,3237	0/0:11,0:11:27.09:0,27,1358	0/0:31,0:31:84.29:0,84,5507	0/0:42,0:42:99:0,104,6895	0/0:27,0:27:69.22:0,69,4374	0/0:21,0:19:51.17:0,51,2241	0/0:16,0:15:36.11:0,36,2253	0/0:45,0:44:99:0,117,7517	0/1:10,6:15:99:123,0,1160	0/1:5,6:11:99:280,0,909	0/1:24,2:22:62.55:63,0,1778	0/0:15,0:15:39.09:0,39,2148	0/0:21,0:21:60.19:0,60,3589	0/0:17,0:17:47.76:0,48,2795	0/0:11,0:11:33.11:0,33,2240
chr10	46988093	.	CAGG	C	8316.14	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=14.317;DP=607;FS=1.592;HRun=0;HaplotypeScore=70.7184;InbreedingCoeff=0.9855;MQ=52.73;MQ0=78;MQRankSum=-1.426;QD=32.87;ReadPosRankSum=1.806;VQSLOD=5.0418;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,102,2274	0/0:7,0:7:18.06:0,18,413	0/0:8,0:5:12.04:0,12,249	0/0:11,0:7:18.03:0,18,326	1/1:1,11:10:21.07:358,21,0	0/0:21,0:21:57.20:0,57,1312	0/0:26,0:25:75.26:0,75,1708	1/1:47,7:6:15.02:180,15,0	0/0:29,0:24:48.16:0,48,1085	1/1:0,20:18:51.17:865,51,0	1/1:1,10:10:27.09:460,27,0	0/0:22,0:20:48.16:0,48,1064	0/0:22,0:21:60.20:0,60,1379	1/1:0,27:27:69.24:1162,69,0	0/0:24,0:24:54.19:0,54,1245	1/1:1,27:28:12.35:1257,12,0	1/1:2,18:20:36.12:614,36,0	1/1:1,19:18:42.14:716,42,0	0/0:35,0:10:30.10:0,30,692	0/0:10,0:10:30.10:0,30,691	0/0:23,0:20:60.21:0,60,1383	0/0:15,0:15:36.12:0,36,796	0/0:9,0:8:24.08:0,24,553	0/0:25,0:25:60.21:0,60,1350	1/1:0,27:27:78.22:1297,78,0	1/1:1,20:21:60.17:947,60,0	0/0:26,0:26:75.23:0,75,1701	1/1:2,11:10:27.09:460,27,0
chr10	46988284	.	TACTC	T	2891.07	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=6.198;DP=556;FS=7.471;HRun=0;HaplotypeScore=84.7042;InbreedingCoeff=0.9883;MQ=56.02;MQ0=17;MQRankSum=-4.595;QD=28.07;ReadPosRankSum=-1.463;VQSLOD=2.7159;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,24:22:33.07:600,33,0	0/0:7,0:6:18.06:0,18,493	0/0:12,0:6:15.05:0,15,396	0/0:15,0:11:27.09:0,27,646	0/0:23,0:21:57.20:0,57,1557	0/0:28,0:28:75.21:0,75,1990	0/0:25,0:24:57.20:0,57,1560	0/0:43,0:33:93.28:0,93,2403	0/0:12,0:12:27.09:0,27,738	0/0:14,0:14:42.14:0,42,1151	0/0:14,0:13:36.12:0,36,977	0/0:20,0:20:51.18:0,51,1397	0/0:15,0:14:42.14:0,42,1139	0/0:32,0:32:72.25:0,72,1968	0/0:23,0:23:60.21:0,60,1639	0/0:27,0:27:72.25:0,72,1965	0/0:24,0:24:60.21:0,60,1642	0/0:14,0:14:33.03:0,33,771	1/1:3,11:11:30:460,30,0	1/1:0,19:14:27.09:522,27,0	1/1:0,19:15:21.03:369,21,0	0/0:10,0:10:24.08:0,24,644	0/0:13,0:13:33.11:0,33,897	0/0:40,0:40:99:0,99,2711	0/0:17,0:17:51.18:0,51,1364	0/0:18,0:18:51.18:0,51,1397	1/1:1,24:25:60.16:1115,60,0	0/0:7,0:7:15.05:0,15,411
chr10	46989935	.	A	ATT	3895.01	PASS	AB=0.659;AC=25;AF=0.446;AN=56;BaseQRankSum=-6.216;DP=586;FS=11.114;HRun=14;HaplotypeScore=85.8094;InbreedingCoeff=0.7308;MQ=67.14;MQ0=5;MQRankSum=0.757;QD=12.40;ReadPosRankSum=0.219;VQSLOD=1.5350;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:16,1:41:3.24:127,0,3	0/0:1,0:11:24.70:0,25,105	0/0:30,1:17:16.05:0,16,107	0/0:19,0:11:9.27:0,9,50	1/1:6,7:19:40.29:346,40,0	1/1:4,2:20:2.26:90,2,0	0/1:5,1:13:7.23:63,0,7	1/1:19,16:37:31.23:561,31,0	0/0:5,0:20:32.86:0,33,141	1/1:11,19:31:51.16:655,51,0	1/1:6,11:20:27.99:228,28,0	0/0:3,0:8:10.76:0,11,46	0/0:4,0:17:22.15:0,22,102	1/1:4,5:10:6.02:79,6,0	0/0:9,0:19:21.69:0,22,92	1/1:9,6:17:4.76:123,5,0	1/1:5,20:27:16.51:561,17,0	1/1:12,15:27:35.48:441,35,0	0/0:29,0:32:30.14:0,30,291	0/0:22,0:26:46.98:0,47,362	0/0:11,0:12:20.83:0,21,175	0/0:5,0:10:19.59:0,20,108	0/0:5,0:18:29.72:0,30,128	0/0:5,0:18:21.78:0,22,94	0/1:9,5:14:10.05:142,0,10	1/1:10,12:23:6.80:273,7,0	0/0:25,0:27:32.23:0,32,304	1/1:6,5:11:17.54:205,18,0
chr10	46992964	.	ACCAT	A	7054.20	PASS	AB=0.682;AC=34;AF=0.680;AN=50;BaseQRankSum=6.479;DP=735;FS=0.966;HRun=0;HaplotypeScore=143.6986;InbreedingCoeff=0.7982;MQ=70.17;MQ0=9;MQRankSum=-0.740;QD=16.64;ReadPosRankSum=0.938;VQSLOD=4.7444;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:56:72.25:0,72,1251	1/1:2,5:7:15.05:231,15,0	./.	./.	1/1:14,9:22:15.05:231,15,0	1/1:8,10:18:21.07:323,21,0	0/1:17,13:30:14.49:299,0,14	./.	0/0:28,0:28:51.16:0,51,1080	1/1:9,9:18:27.08:394,27,0	1/1:8,3:11:9.03:138,9,0	0/0:31,0:31:48.16:0,48,1115	0/0:30,0:30:30.10:0,30,678	1/1:21,12:33:35.95:553,36,0	1/1:14,15:29:39.13:600,39,0	1/1:11,8:19:18.06:277,18,0	1/1:18,22:40:51.17:784,51,0	0/1:8,7:16:6.97:256,0,7	1/1:18,7:25:21.07:323,21,0	1/1:11,3:14:12:158,12,0	1/1:31,33:63:69.03:1061,69,0	0/0:14,0:14:15.04:0,15,303	0/0:12,0:12:15.05:0,15,342	0/0:50,0:50:81.26:0,81,1830	1/1:4,9:13:18.06:276,18,0	1/1:14,9:23:27.07:369,27,0	1/1:18,12:30:39.13:598,39,0	1/1:7,4:11:12.04:185,12,0
chr10	46993200	.	CT	C	2715.42	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-6.600;DP=482;FS=5.969;HRun=8;HaplotypeScore=96.1670;InbreedingCoeff=0.9591;MQ=74.11;MQ0=0;MQRankSum=0.900;QD=22.08;ReadPosRankSum=0.673;VQSLOD=3.6514;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,24:27:66.10:637,66,0	0/0:7,0:7:21.06:0,21,254	0/0:10,0:11:23.09:0,23,254	0/0:6,0:6:10.77:0,11,94	0/0:0,0:23:60.36:0,60,311	0/0:2,0:17:46.27:0,46,276	0/0:1,0:7:17.25:0,17,88	0/0:19,0:39:80.91:0,81,454	0/0:9,0:9:24.07:0,24,290	0/0:7,0:20:42.90:0,43,229	0/0:0,0:17:43.09:0,43,222	0/0:16,0:16:45.12:0,45,529	0/0:17,0:17:51.16:0,51,616	0/0:1,0:9:20.13:0,20,102	0/0:13,0:13:36.11:0,36,435	0/0:0,0:11:25.88:0,26,131	0/0:4,0:29:57.57:0,58,295	0/0:3,0:16:35.48:0,35,170	1/1:5,25:30:75.06:711,75,0	1/1:4,23:27:68.47:644,68,0	1/1:1,11:12:27.04:261,27,0	0/0:2,0:2:6.02:0,6,72	0/0:17,0:18:48.01:0,48,558	0/0:8,0:8:21.06:0,21,254	0/0:0,0:28:66.13:0,66,335	0/0:6,0:26:63.07:0,63,320	1/1:3,24:27:66.10:637,66,0	0/0:4,0:10:20.22:0,20,107
chr10	46994826	.	CTTT	C	1432.82	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=0.980;DP=697;FS=2.355;HRun=5;HaplotypeScore=137.7846;InbreedingCoeff=0.9988;MQ=76.81;MQ0=0;MQRankSum=-2.281;QD=37.71;ReadPosRankSum=3.122;VQSLOD=1.6932;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:66.14:0,66,1380	1/1:0,15:15:36.12:602,36,0	0/0:15,0:15:36.53:0,37,671	0/0:15,0:15:38.65:0,39,646	0/0:35,0:35:99:0,105,2335	0/0:28,0:28:78.25:0,78,1689	0/0:26,0:26:60.21:0,60,1367	0/0:36,0:36:99:0,99,2170	0/0:26,0:26:78.27:0,78,1761	0/0:32,0:32:93.30:0,93,2058	0/0:32,0:32:96.33:0,96,2195	0/0:32,0:32:96.31:0,96,2089	0/0:18,0:18:54.17:0,54,1165	0/0:23,0:23:63.21:0,63,1365	1/1:1,22:23:57.19:953,57,0	0/0:27,0:27:75.26:0,75,1728	0/0:20,0:20:54.16:0,54,1127	0/0:9,0:9:24.08:0,24,529	0/0:23,0:23:63.21:0,63,1362	0/0:22,0:22:63.22:0,63,1453	0/0:24,0:24:72.24:0,72,1618	0/0:23,0:23:69.24:0,69,1576	0/0:28,0:28:84.29:0,84,1917	0/0:17,0:17:51.18:0,51,1157	0/0:25,0:25:66.22:0,66,1465	0/0:37,0:37:99:0,105,2391	0/0:46,0:46:99:0,135,3055	0/0:18,0:18:48.16:0,48,1033
chr10	46994881	.	CATTGT	C	19087.36	PASS	AB=0.508;AC=25;AF=0.446;AN=56;BaseQRankSum=9.230;DP=679;FS=13.398;HRun=0;HaplotypeScore=151.6903;InbreedingCoeff=0.9305;MQ=81.33;MQ0=0;MQRankSum=-12.534;QD=56.64;ReadPosRankSum=3.785;VQSLOD=4.9136;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:66.23:0,66,2165	0/0:14,0:14:33.11:0,33,1099	0/0:22,0:22:66.20:0,66,2040	0/0:20,0:20:59.65:0,60,1661	1/1:0,35:35:81.15:1668,81,0	1/1:0,28:28:75.26:1746,75,0	1/1:0,16:16:30.10:635,30,0	1/1:0,27:27:81.26:1815,81,0	0/0:24,0:24:72.25:0,72,2395	1/1:0,35:35:99:2341,105,0	1/1:0,27:28:63.21:1297,63,0	0/0:19,0:19:57.20:0,57,1818	0/0:22,0:22:66.23:0,66,2111	1/1:0,27:27:72.24:1579,72,0	0/0:29,0:29:84.29:0,84,2790	0/1:1,31:32:9.64:1905,0,10	1/1:0,20:20:45.15:1019,45,0	1/1:0,6:6:12.04:279,12,0	0/0:18,0:18:54.18:0,54,1607	0/0:24,0:23:72.25:0,72,2352	0/0:29,0:29:87.27:0,87,2719	0/0:23,0:23:69.22:0,69,2148	0/0:23,0:23:69.22:0,69,2113	0/0:15,0:15:45.15:0,45,1499	1/1:0,25:25:60.20:1268,60,0	1/1:0,35:35:99:2378,105,0	0/0:38,0:37:99:0,114,3447	1/1:0,23:23:51.17:1157,51,0
chr10	46995336	.	CTCCCTCCCTCCCTCCCTCCTTCCTTCCTTCCT	C	511.25	PASS	AC=6;AF=0.176;AN=34;BaseQRankSum=-1.161;DP=110;FS=4.650;HRun=0;HaplotypeScore=87.0795;InbreedingCoeff=0.4616;MQ=34.41;MQ0=25;MQRankSum=-0.534;QD=17.04;ReadPosRankSum=0.627;VQSLOD=1.0685;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:7:13.91:0,14,317	./.	./.	./.	0/0:2,0:1:3.01:0,3,49	1/1:0,15:15:3.01:173,3,0	1/1:11,0:9:17.94:424,18,0	0/0:9,0:5:7.05:0,7,35	0/0:6,0:5:12.04:0,12,355	0/0:4,0:2:6.01:0,6,57	0/0:2,0:2:3:0,3,25	0/0:4,0:3:8.98:0,9,434	0/0:5,0:5:10.85:0,11,463	0/0:2,0:1:3:0,3,25	./.	./.	1/1:4,0:3:0.04:17,0,0	./.	./.	0/0:1,0:1:2.88:0,3,15	0/0:10,0:6:15.05:0,15,707	0/0:7,0:6:18.06:0,18,694	0/0:2,0:2:6.02:0,6,178	0/0:5,0:5:11.25:0,11,248	./.	./.	./.	./.
chr10	46995352	.	CTCCTTCCTTCCTTCCT	C	971.65	PASS	AC=10;AF=0.278;AN=36;BaseQRankSum=-3.226;DP=128;FS=5.081;HRun=0;HaplotypeScore=73.3814;InbreedingCoeff=0.6383;MQ=36.06;MQ0=16;MQRankSum=-0.203;QD=22.60;ReadPosRankSum=-1.151;VQSLOD=1.0011;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:6:12.04:0,12,327	./.	./.	./.	./.	1/1:15,0:15:3.01:70,3,0	1/1:18,0:16:32.87:831,33,0	0/0:9,0:5:0:0,0,0	0/0:7,0:6:18.06:0,18,425	./.	1/1:0,5:5:3.01:40,3,0	0/0:6,0:5:15.04:0,15,404	0/0:5,0:5:15.05:0,15,432	./.	0/0:2,0:2:6.02:0,6,204	1/1:1,0:1:3.01:77,3,0	0/0:4,0:5:4.69:0,5,20	./.	./.	0/0:3,0:3:6.02:0,6,184	0/0:10,0:8:24.08:0,24,745	0/0:8,0:7:21.07:0,21,577	0/0:3,0:3:9.03:0,9,248	0/0:6,0:6:14.26:0,14,320	./.	1/1:4,0:2:3.01:77,3,0	0/0:3,0:3:9.03:0,9,223	./.
chr10	46995998	.	TACAC	T	3925.11	PASS	AB=0.861;AC=18;AF=0.321;AN=56;BaseQRankSum=9.892;DP=618;FS=20.426;HRun=0;HaplotypeScore=108.1242;InbreedingCoeff=0.8096;MQ=67.31;MQ0=3;MQRankSum=0.224;QD=18.69;ReadPosRankSum=1.666;VQSLOD=1.7332;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:36:44.67:0,45,1214	1/1:4,6:10:18.06:289,18,0	0/0:17,0:10:6.49:0,6,146	0/0:32,0:27:7.27:0,7,134	0/0:28,1:29:17.99:0,18,1381	0/0:22,0:24:44.62:0,45,937	0/0:14,0:15:26.83:0,27,567	0/1:26,1:30:6.66:7,0,684	1/1:6,14:21:39.12:607,39,0	0/0:24,1:27:14.42:0,14,1164	0/0:18,0:18:42.14:0,42,972	1/1:10,5:15:15.05:241,15,0	1/1:4,14:18:39.13:628,39,0	0/0:18,0:18:39.11:0,39,804	1/1:13,15:29:39.13:608,39,0	0/0:21,0:22:54.18:0,54,1165	0/0:20,0:22:44.36:0,44,849	0/0:21,0:22:38.87:0,39,831	0/0:21,0:23:32.79:0,33,565	0/0:12,0:12:30.10:0,30,719	0/0:31,0:34:83.47:0,83,1772	1/1:3,9:12:18.06:290,18,0	1/1:6,10:16:27.08:414,27,0	1/1:9,21:32:51.17:801,51,0	0/1:21,2:26:39.91:40,0,1015	0/0:18,0:22:54.89:0,55,1002	0/0:26,0:27:47.14:0,47,981	0/0:6,0:6:12.04:0,12,289
chr10	46996270	.	A	AT	6467.24	PASS	AB=0.728;AC=25;AF=0.446;AN=56;BaseQRankSum=-8.993;DP=542;FS=5.517;HRun=10;HaplotypeScore=59.3501;InbreedingCoeff=0.8025;MQ=75.24;MQ0=4;MQRankSum=0.551;QD=22.15;ReadPosRankSum=0.736;VQSLOD=5.8588;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:38.95:0,39,320	0/0:9,0:9:23.97:0,24,197	0/0:28,0:19:32.19:0,32,264	0/1:18,0:15:7.86:8,0,87	1/1:4,27:31:75.04:771,75,0	1/1:2,18:22:54.11:561,54,0	1/1:5,8:13:11.74:211,12,0	1/1:5,22:28:66.02:678,66,0	0/0:11,0:11:29.94:0,30,243	1/1:8,19:27:63.14:659,63,0	1/1:6,22:28:41.52:647,42,0	0/0:12,0:12:26.96:0,27,222	0/0:20,0:20:50.89:0,51,414	1/1:4,9:13:27.07:288,27,0	0/0:18,0:18:42.39:0,42,340	1/1:1,19:19:51.13:544,51,0	1/1:1,18:19:45.11:480,45,0	0/1:3,6:9:6.72:139,0,7	0/0:19,0:18:41.92:0,42,345	0/0:25,0:25:53.90:0,54,440	0/0:11,0:11:26.91:0,27,215	0/0:12,0:12:29.96:0,30,246	0/0:19,0:19:53.94:0,54,443	0/0:17,0:17:44.95:0,45,369	1/1:9,20:29:57.14:608,57,0	1/1:0,26:27:74.34:818,74,0	0/0:29,0:28:80.88:0,81,661	0/1:2,5:6:15.62:55,0,16
chr10	46996886	.	AGATT	A	8222.63	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-10.419;DP=624;FS=0.367;HRun=0;HaplotypeScore=140.3174;InbreedingCoeff=0.9930;MQ=75.09;MQ0=6;MQRankSum=-0.988;QD=30.57;ReadPosRankSum=3.241;VQSLOD=4.6175;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,21:27:54.18:895,54,0	1/1:3,6:8:12.04:199,12,0	0/0:32,0:29:33.11:0,33,770	0/0:22,0:22:48.15:0,48,1001	0/0:9,0:30:72.16:0,72,1176	0/0:5,0:28:48.16:0,48,844	0/0:3,0:12:21.03:0,21,336	0/0:15,0:24:51.07:0,51,773	1/1:6,9:15:27.09:448,27,0	0/0:8,0:31:69.23:0,69,1156	0/0:6,0:21:51.13:0,51,834	1/1:4,19:21:45.15:746,45,0	1/1:5,11:16:18.03:298,18,0	0/0:8,0:24:51.13:0,51,859	1/1:3,22:25:48.16:796,48,0	0/0:7,0:20:42.14:0,42,750	0/0:7,0:23:54.18:0,54,962	0/0:7,0:13:21.07:0,21,411	1/1:12,10:22:30.10:478,30,0	1/1:4,17:21:42.14:683,42,0	1/1:7,11:18:27.09:448,27,0	1/1:3,13:16:36.12:597,36,0	1/1:4,20:24:51.17:844,51,0	1/1:2,15:17:33.11:547,33,0	0/0:6,0:23:48.12:0,48,811	0/0:8,0:29:81.28:0,81,1425	1/1:8,27:35:75.26:1243,75,0	0/0:5,0:19:30.10:0,30,521
chr10	46997170	.	GAAT	G	13063.86	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=17.448;DP=744;FS=7.472;HRun=0;HaplotypeScore=113.8987;InbreedingCoeff=0.9975;MQ=77.83;MQ0=0;MQRankSum=-5.517;QD=43.69;ReadPosRankSum=1.840;VQSLOD=6.7224;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,135,3147	0/0:12,0:12:36.12:0,36,808	0/0:19,0:20:54.14:0,54,1210	0/0:14,0:14:30.12:0,30,799	1/1:2,21:23:39.13:687,39,0	0/0:22,0:22:66.23:0,66,1561	0/0:30,0:30:90.31:0,90,2083	1/1:0,22:22:66.23:1135,66,0	0/0:24,0:24:69.22:0,69,1585	1/1:1,30:31:84.29:1464,84,0	1/1:0,8:8:15.05:264,15,0	0/0:39,0:39:99:0,117,2746	0/0:33,0:33:99:0,99,2327	1/1:1,42:43:99:2159,123,0	0/0:29,0:29:84.27:0,84,1877	1/1:3,38:41:28.37:1622,28,0	1/1:2,28:30:63.22:1111,63,0	1/1:0,20:20:54.19:952,54,0	0/0:15,0:15:42.14:0,42,994	0/0:14,0:14:42.14:0,42,949	0/0:45,0:45:99:0,135,3095	0/0:25,0:25:75.24:0,75,1605	0/0:19,0:19:57.20:0,57,1281	0/0:34,0:34:99:0,99,2273	1/1:0,30:30:69.23:1176,69,0	1/1:0,33:33:99:1697,99,0	0/0:24,0:24:72.25:0,72,1664	1/1:0,18:18:45.15:794,45,0
chr10	47000387	.	G	GA	2948.22	PASS	AB=0.981;AC=28;AF=0.519;AN=54;BaseQRankSum=3.411;DP=397;FS=1.516;HRun=11;HaplotypeScore=158.5648;InbreedingCoeff=0.4264;MQ=58.15;MQ0=3;MQRankSum=-3.223;QD=11.25;ReadPosRankSum=-1.248;VQSLOD=1.3191;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:16,1:19:9.67:0,10,195	0/1:7,0:7:25.48:25,0,32	0/1:15,0:15:13.71:14,0,29	0/0:10,0:9:2.89:0,3,17	1/1:18,14:34:35.83:553,36,0	0/1:14,2:16:52.88:54,0,53	0/0:16,0:16:21.72:0,22,237	1/1:19,7:24:19.78:359,20,0	0/1:17,0:18:60.15:60,0,111	1/1:12,12:24:31.58:420,32,0	1/1:7,5:13:14.83:206,15,0	0/1:9,0:9:29.92:30,0,35	0/0:6,0:6:10.58:0,11,90	1/1:4,5:9:23.48:207,23,0	0/0:9,0:9:0.99:0,1,123	1/1:5,3:8:18.03:134,18,0	1/1:3,3:6:11.41:104,11,0	1/1:4,3:7:14.19:115,14,0	0/0:18,0:19:25.16:0,25,241	0/0:21,0:21:19.21:0,19,249	./.	0/0:6,0:6:10.54:0,11,76	0/1:13,0:13:6.60:7,0,95	0/0:5,0:4:8.90:0,9,64	1/1:16,9:26:1.24:323,1,0	1/1:9,8:18:38.88:316,39,0	0/0:22,0:22:40.02:0,40,293	1/1:4,7:11:6.42:211,6,0
chr10	47000403	.	C	CA	1543.01	PASS	AB=1.000;AC=50;AF=0.893;AN=56;BaseQRankSum=3.025;DP=428;FS=26.596;HRun=10;HaplotypeScore=122.9087;InbreedingCoeff=0.4393;MQ=53.88;MQ0=2;MQRankSum=-4.384;QD=3.78;ReadPosRankSum=2.145;VQSLOD=0.0610;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:5,19:24:1.84:430,2,0	1/1:9,0:9:14.46:60,14,0	0/0:13,0:11:16.59:0,17,128	0/0:7,0:6:16.80:0,17,129	1/1:37,0:37:27.69:123,28,0	1/1:17,0:17:8.53:26,9,0	1/1:19,0:18:9.86:33,10,0	1/1:26,0:23:13.68:59,14,0	1/1:17,0:17:23.66:96,24,0	1/1:24,0:24:32.28:159,32,0	1/1:18,0:18:16.66:83,17,0	1/1:10,0:10:19.16:91,19,0	1/1:6,0:6:5.74:30,6,0	1/1:10,0:10:9.06:35,9,0	1/1:11,0:11:12.95:57,13,0	1/1:9,0:9:11.22:53,11,0	1/1:7,0:7:2.80:13,3,0	1/1:8,0:8:2.94:19,3,0	1/1:26,0:26:4.01:23,4,0	1/1:26,0:26:8.15:22,8,0	1/1:3,0:3:2.70:8,3,0	1/1:7,0:7:5.44:24,5,0	0/1:10,0:10:0.54:54,0,1	0/1:4,0:3:0:0,0,0	1/1:26,0:26:13.31:58,13,0	1/1:21,0:21:15.52:76,16,0	1/1:22,0:22:2.84:15,3,0	1/1:11,0:11:4.71:19,5,0
chr10	47000409	.	A	AAAAG	10032.58	PASS	AB=0.956;AC=44;AF=0.786;AN=56;BaseQRankSum=6.150;DP=463;FS=147.077;HRun=0;HaplotypeScore=260.9354;InbreedingCoeff=0.3142;MQ=58.33;MQ0=1;MQRankSum=-6.711;QD=24.17;ReadPosRankSum=2.172;VQSLOD=1.7585;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:55.98:0,56,399	1/1:9,0:12:33:346,33,0	0/0:15,0:13:25.20:0,25,360	0/0:8,0:7:21.07:0,21,319	1/1:26,11:37:79.21:1163,79,0	0/1:18,0:18:99:174,0,135	0/1:20,0:19:86.34:229,0,86	1/1:26,0:24:36.45:636,36,0	1/1:6,0:18:41.91:567,42,0	1/1:21,4:26:66.51:964,67,0	1/1:15,4:19:55.53:776,56,0	1/1:8,0:12:14.13:310,14,0	1/1:5,0:5:14.97:154,15,0	1/1:8,4:13:23.88:350,24,0	1/1:12,0:14:38.90:397,39,0	1/1:5,4:11:23.90:411,24,0	1/1:4,5:9:11.86:161,12,0	1/1:10,0:10:23.99:268,24,0	0/1:26,0:26:99:168,0,230	0/1:26,0:26:99:227,0,197	0/1:4,0:4:10.86:11,0,41	1/1:6,0:14:16.68:151,17,0	0/1:7,0:11:18.89:210,0,19	1/1:2,0:2:2.99:24,3,0	1/1:16,7:24:41.34:704,41,0	1/1:13,10:25:46.74:1005,47,0	1/1:21,0:21:5.37:412,5,0	1/1:10,1:11:6.27:215,6,0
chr10	47001110	.	T	TCA	13921.62	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-14.156;DP=670;FS=0.602;HRun=0;HaplotypeScore=77.2243;InbreedingCoeff=0.9871;MQ=87.58;MQ0=0;MQRankSum=-4.110;QD=52.53;ReadPosRankSum=1.091;VQSLOD=5.0870;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,108,1633	0/0:11,0:11:33.11:0,33,505	0/0:26,0:26:66.10:0,66,882	0/0:25,0:26:6.85:0,7,794	1/1:2,26:28:68.72:1272,69,0	0/0:28,0:28:81.23:0,81,1215	0/0:27,0:27:81.28:0,81,1241	1/1:6,33:39:99:2036,108,0	0/0:28,0:28:84.29:0,84,1280	1/1:1,26:29:84.25:1567,84,0	1/1:1,14:16:39.13:752,39,0	0/0:20,0:20:60.20:0,60,919	0/0:24,0:24:72.24:0,72,1102	1/1:0,21:21:63.22:1216,63,0	0/0:23,0:23:69.23:0,69,1057	1/1:5,26:31:41.35:1548,41,0	1/1:1,22:23:63.22:1217,63,0	1/1:1,20:21:57.20:1101,57,0	0/0:19,0:19:54.16:0,54,786	0/0:18,0:18:48.16:0,48,735	0/0:41,0:41:99:0,120,1792	0/0:16,0:16:48.16:0,48,731	0/0:19,0:19:51.12:0,51,729	0/0:17,0:17:48.12:0,48,709	1/1:0,24:24:72.25:1387,72,0	1/1:1,20:21:63.22:1188,63,0	0/0:23,0:23:69.22:0,69,1034	1/1:1,11:12:33.11:637,33,0
chr10	47001340	.	TCACTGGG	T	5838.19	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=11.060;DP=492;FS=18.267;HRun=0;HaplotypeScore=127.1267;InbreedingCoeff=0.9967;MQ=84.83;MQ0=0;MQRankSum=-11.550;QD=66.34;ReadPosRankSum=2.509;VQSLOD=3.7010;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:78.27:0,78,2985	0/0:11,0:11:33.11:0,33,1371	0/0:18,0:18:49.18:0,49,1619	0/0:25,0:25:68.74:0,69,2175	0/0:10,0:10:30.10:0,30,1211	0/0:21,0:21:63.20:0,63,2462	0/0:27,0:27:81.28:0,81,3310	0/0:21,0:21:62.75:0,63,2184	1/1:0,19:19:48.16:1325,48,0	0/0:18,0:18:54.19:0,54,2267	0/0:7,0:7:21.07:0,21,801	1/1:0,16:16:45.15:1255,45,0	1/1:0,13:13:34:921,34,0	0/0:12,0:12:36.04:0,36,1394	0/0:21,0:21:63.22:0,63,2490	0/0:17,0:17:51.18:0,51,2035	0/0:31,0:31:87.23:0,87,3359	0/0:18,0:18:51.65:0,52,2072	0/0:19,0:19:57.20:0,57,2159	0/0:11,0:11:33.11:0,33,1337	0/0:25,0:25:75.23:0,75,2793	1/1:1,16:17:42.14:1138,42,0	1/1:0,13:13:27.09:730,27,0	1/1:0,10:10:18.06:470,18,0	0/0:9,0:9:27.09:0,27,1038	0/0:22,0:22:63.22:0,63,2434	0/0:24,0:23:72.25:0,72,2823	0/0:10,0:10:30.10:0,30,1259
chr10	47001417	.	T	TAC	1248.84	PASS	AB=0.820;AC=46;AF=0.885;AN=52;BaseQRankSum=2.650;DP=640;FS=0.000;HRun=0;HaplotypeScore=186.4248;InbreedingCoeff=-0.0873;MQ=53.64;MQ0=15;MQRankSum=-3.067;QD=2.16;ReadPosRankSum=0.769;VQSLOD=2.4271;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:32,0:32:14.02:118,14,0	1/1:12,0:11:2.65:37,3,0	0/1:23,0:14:22.65:77,0,23	0/1:34,0:19:59.55:60,0,78	1/1:30,0:28:5.90:67,6,0	0/1:9,10:21:26.93:39,0,27	0/1:16,9:27:75.06:200,0,75	1/1:34,0:33:6.89:56,7,0	1/1:21,0:20:2.63:13,3,0	1/1:30,0:27:15.16:103,15,0	./.	1/1:20,0:20:2.98:22,3,0	1/1:16,0:16:8.62:82,9,0	1/1:21,0:21:3.01:34,3,0	1/1:21,0:19:0.34:1,0,0	1/1:28,0:28:4.90:25,5,0	1/1:28,0:27:2.94:18,3,0	1/1:16,0:16:2.88:15,3,0	1/1:15,0:14:9.76:79,10,0	1/1:17,0:17:6.02:77,6,0	1/1:26,0:24:5.62:42,6,0	1/1:12,0:11:2.99:23,3,0	./.	1/1:21,0:21:2.96:28,3,0	0/0:26,0:26:0:0,0,0	1/1:34,0:31:8.23:73,8,0	1/1:18,0:15:5.52:40,6,0	1/1:18,0:17:5.70:31,6,0
chr10	47002160	.	GA	G	3107.35	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-1.775;DP=545;FS=2.307;HRun=11;HaplotypeScore=62.5935;InbreedingCoeff=0.8966;MQ=58.18;MQ0=16;MQRankSum=-0.155;QD=14.00;ReadPosRankSum=2.021;VQSLOD=4.0461;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:40:99:0,99,1016	0/0:5,0:6:0.10:0,0,66	0/0:16,1:8:1.25:0,1,117	0/0:9,0:5:12:0,12,115	1/1:3,14:16:35.44:295,35,0	0/0:4,0:17:28.57:0,29,148	0/0:7,0:24:63.14:0,63,352	1/1:12,23:36:64.90:523,65,0	0/0:21,0:21:39.05:0,39,396	1/1:4,9:12:26.97:222,27,0	1/1:4,14:16:17.92:148,18,0	0/0:14,0:13:33.04:0,33,333	0/0:17,0:16:39.10:0,39,415	1/1:4,15:19:38.94:320,39,0	0/0:17,0:18:38.93:0,39,398	1/1:1,12:14:2.78:220,3,0	1/1:11,20:30:58.77:473,59,0	1/1:3,24:26:53.92:443,54,0	0/0:24,0:23:60.10:0,60,620	0/0:16,0:17:35.93:0,36,335	0/0:20,0:20:48.11:0,48,503	0/0:12,0:12:29.11:0,29,294	0/0:19,0:19:36.02:0,36,362	0/0:18,1:18:23.47:0,23,454	1/1:3,13:16:14.63:122,15,0	1/1:1,17:17:41.93:341,42,0	0/0:24,1:24:23.44:0,23,443	1/1:4,8:11:26.90:216,27,0
chr10	47006934	.	G	GTT	11000.45	PASS	AB=0.608;AC=51;AF=0.911;AN=56;BaseQRankSum=-1.400;DP=665;FS=1.398;HRun=13;HaplotypeScore=102.6431;InbreedingCoeff=0.6331;MQ=68.36;MQ0=6;MQRankSum=-3.034;QD=17.22;ReadPosRankSum=1.512;VQSLOD=4.2541;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:16,2:45:12.04:225,0,12	1/1:8,0:8:17.97:145,18,0	0/0:15,0:14:4.06:0,4,36	0/0:10,0:8:5.23:0,5,48	1/1:34,0:34:92.82:757,93,0	1/1:24,0:24:35.95:296,36,0	1/1:19,0:19:41.88:333,42,0	1/1:28,0:28:41.65:306,42,0	1/1:28,0:28:65.90:541,66,0	1/1:32,0:32:80.17:564,80,0	1/1:27,0:26:65.93:562,66,0	1/1:21,0:20:47.93:394,48,0	1/1:28,0:28:59.94:506,60,0	1/1:22,0:22:47.92:393,48,0	1/1:21,0:21:47.84:381,48,0	1/1:29,0:29:80.83:649,81,0	1/1:14,0:14:38.70:313,39,0	1/1:24,0:24:56.95:485,57,0	1/1:11,12:23:15.70:330,16,0	1/1:2,20:26:67.89:674,68,0	1/1:12,7:22:47.91:468,48,0	1/1:33,0:30:83.77:668,84,0	1/1:22,0:22:56.91:464,57,0	1/1:21,0:21:47.91:387,48,0	1/1:25,0:23:53.88:434,54,0	1/1:22,0:22:50.70:372,51,0	1/1:8,18:30:24.31:203,24,0	1/1:11,0:11:17.99:152,18,0
chr10	47006939	.	T	TTG	19017.82	PASS	AB=1.000;AC=46;AF=0.821;AN=56;BaseQRankSum=-12.447;DP=667;FS=1.452;HRun=0;HaplotypeScore=71.5673;InbreedingCoeff=0.5733;MQ=68.18;MQ0=6;MQRankSum=0.236;QD=31.91;ReadPosRankSum=7.764;VQSLOD=5.9701;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:53.23:0,53,546	1/1:0,8:8:20.96:309,21,0	0/0:14,0:12:25.77:0,26,250	0/0:13,0:11:26.72:0,27,254	1/1:0,34:36:99:1555,102,0	1/1:1,21:22:36.11:585,36,0	1/1:2,15:17:42.12:676,42,0	1/1:4,21:25:63.05:842,63,0	1/1:1,26:27:66.21:1073,66,0	1/1:1,33:34:93.23:1390,93,0	1/1:1,26:26:72.04:1101,72,0	1/1:1,20:20:48.16:777,48,0	1/1:0,25:26:60.20:970,60,0	1/1:0,24:24:48.16:780,48,0	1/1:2,22:24:48.14:767,48,0	1/1:0,30:31:81.28:1318,81,0	1/1:1,16:17:23.02:569,23,0	1/1:0,22:22:57.19:925,57,0	0/1:17,0:17:48.90:49,0,125	0/1:25,0:25:19.37:109,0,19	0/1:21,0:21:38.68:39,0,114	1/1:0,37:35:95.90:1418,96,0	1/1:1,22:24:57.16:927,57,0	1/1:1,21:22:48.15:781,48,0	1/1:1,26:26:54.17:855,54,0	1/1:1,20:22:60.16:910,60,0	0/1:31,0:31:1.69:2,0,187	1/1:0,7:7:18.06:292,18,0
chr10	47011200	.	AT	A	2123.42	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=7.191;DP=642;FS=3.190;HRun=8;HaplotypeScore=66.6014;InbreedingCoeff=0.9908;MQ=73.58;MQ0=0;MQRankSum=2.093;QD=23.86;ReadPosRankSum=-0.110;VQSLOD=4.3241;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,2:42:53.35:0,53,1184	0/0:4,0:4:12.04:0,12,145	0/0:18,0:18:35.44:0,35,437	0/0:16,0:15:32.38:0,32,307	0/0:30,0:30:81.25:0,81,978	0/0:23,0:23:63.19:0,63,761	0/0:31,0:31:78.24:0,78,942	0/0:22,1:23:31.16:0,31,634	0/0:17,0:17:45.10:0,45,527	0/0:17,0:17:48.15:0,48,579	0/0:13,0:13:33.10:0,33,398	0/0:27,0:27:63.19:0,63,751	0/0:30,0:30:81.25:0,81,976	0/0:31,0:31:90.26:0,90,1075	0/0:35,0:35:96.25:0,96,1143	0/0:30,0:30:66.20:0,66,797	0/0:22,0:22:66.14:0,66,758	0/0:14,0:14:36.07:0,36,418	1/1:2,17:19:51.07:488,51,0	1/1:0,17:17:51.08:492,51,0	1/1:1,26:27:69.11:666,69,0	0/0:16,0:16:45.10:0,45,528	0/0:25,0:25:63.17:0,63,736	0/0:19,0:19:45.14:0,45,544	0/0:20,0:20:45.14:0,45,544	0/0:29,1:30:26.31:0,26,883	1/1:2,24:26:66.11:637,66,0	0/0:20,0:20:51.16:0,51,616
chr10	47011290	.	TGGAGGC	T	13257.03	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=14.592;DP=617;FS=1.535;HRun=0;HaplotypeScore=136.8355;InbreedingCoeff=0.9318;MQ=64.19;MQ0=0;MQRankSum=-13.643;QD=35.26;ReadPosRankSum=3.226;VQSLOD=4.3125;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,129,3532	1/1:1,11:11:24.08:547,24,0	0/0:22,0:22:53.68:0,54,1333	0/0:27,0:26:64.15:0,64,1685	1/1:1,11:12:14.98:261,15,0	0/0:14,0:14:42.06:0,42,1292	0/0:36,0:36:90.13:0,90,2631	1/1:6,16:22:45.02:631,45,0	1/1:0,23:23:45.09:947,45,0	1/1:4,27:30:75.21:1440,75,0	1/1:1,7:8:6.02:137,6,0	1/1:2,20:22:41.94:806,42,0	1/1:2,25:27:57.20:1270,57,0	1/1:6,24:31:45:894,45,0	1/1:0,24:24:57.20:1270,57,0	1/1:1,30:31:66.04:1425,66,0	1/1:2,9:11:18.06:351,18,0	1/1:1,15:16:27.09:616,27,0	0/0:12,0:12:30.02:0,30,723	0/0:17,0:17:48.11:0,48,1463	0/0:49,0:49:99:0,135,4462	1/1:3,28:28:39.13:889,39,0	1/1:0,11:10:12.04:274,12,0	1/1:4,14:18:6.02:137,6,0	1/1:4,14:18:21.07:448,21,0	1/1:3,22:24:60.03:889,60,0	0/0:19,0:19:54.17:0,54,1799	1/1:3,0:3:2.99:24,3,0
chr10	47011655	.	AC	A	5695.59	PASS	AB=1.000;AC=53;AF=0.946;AN=56;BaseQRankSum=-4.558;DP=405;FS=8.317;HRun=2;HaplotypeScore=40.2866;InbreedingCoeff=0.5237;MQ=70.38;MQ0=24;MQRankSum=-2.320;QD=16.13;ReadPosRankSum=3.497;VQSLOD=4.3542;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:16:35.30:231,35,0	1/1:4,0:4:11.90:87,12,0	0/0:52,0:21:25.38:0,25,237	0/1:44,0:13:6.69:7,0,104	1/1:11,0:10:29.82:231,30,0	1/1:14,0:13:38.83:314,39,0	1/1:13,0:13:2.99:24,3,0	1/1:18,0:18:53.84:455,54,0	1/1:12,0:12:19.64:124,20,0	1/1:11,0:8:24.01:218,24,0	1/1:8,0:8:21.38:166,21,0	1/1:6,0:5:11.82:99,12,0	1/1:8,0:8:17.24:136,17,0	1/1:11,0:11:32.98:279,33,0	1/1:14,0:13:41.97:354,42,0	1/1:17,1:19:51.34:422,51,0	1/1:11,0:11:29.93:249,30,0	1/1:12,0:12:29.98:253,30,0	1/1:10,0:8:21.02:190,21,0	1/1:19,0:19:47.76:310,48,0	1/1:19,0:19:51.35:417,51,0	1/1:5,0:5:11.94:95,12,0	1/1:2,4:5:0.46:1,0,0	1/1:5,0:5:5.96:48,6,0	1/1:13,0:13:2.94:18,3,0	1/1:9,3:11:30.02:272,30,0	1/1:20,0:20:59.86:486,60,0	1/1:9,0:9:26.87:209,27,0
chr10	47011656	.	CCAAAAAAAAA	C	3145.45	PASS	AB=0.988;AC=31;AF=0.554;AN=56;BaseQRankSum=-5.265;DP=410;FS=31.697;HRun=0;HaplotypeScore=101.6090;InbreedingCoeff=-0.2729;MQ=68.67;MQ0=26;MQRankSum=3.640;QD=9.65;ReadPosRankSum=-2.603;VQSLOD=0.1007;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:17,0:16:99:126,0,730	0/1:4,0:4:25.70:26,0,45	0/0:52,0:20:33.40:0,33,299	0/1:45,0:13:1.62:2,0,165	0/1:11,0:10:62.74:63,0,87	1/1:14,0:13:37.37:327,37,0	1/1:0,0:12:3.01:63,3,0	0/1:18,0:18:99:114,0,139	0/1:12,0:12:65.07:65,0,739	1/1:12,0:8:4.05:152,4,0	0/1:7,0:8:21.73:22,0,93	0/1:7,0:6:81.18:81,0,109	0/1:8,0:8:99:107,0,279	0/1:12,0:12:9.24:147,0,9	0/1:14,0:13:7.78:190,0,8	0/1:19,0:19:99:239,0,117	0/1:11,0:11:34.01:123,0,34	0/0:11,0:11:8.12:0,8,60	0/1:12,0:10:82.06:92,0,82	1/1:4,15:19:18.34:240,18,0	1/1:18,0:18:43.39:330,43,0	1/1:6,0:5:11.94:95,12,0	0/0:7,0:6:6.49:0,6,179	0/1:5,0:5:38.15:38,0,90	0/0:3,0:13:3.47:0,3,29	0/1:12,0:11:22.51:168,0,23	1/1:20,0:21:36.17:359,36,0	0/1:8,0:9:40.78:144,0,41
chr10	47011937	.	GGCA	G	20644.57	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=15.627;DP=716;FS=27.720;HRun=0;HaplotypeScore=111.8645;InbreedingCoeff=0.9948;MQ=85.05;MQ0=0;MQRankSum=-5.023;QD=46.29;ReadPosRankSum=6.642;VQSLOD=3.5480;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,123,2994	1/1:0,6:6:12.04:222,12,0	0/0:30,0:30:90.31:0,90,2109	0/0:31,0:31:93.32:0,93,2083	1/1:0,22:22:45.15:837,45,0	0/0:30,0:30:90.30:0,90,2169	0/0:20,0:20:60.21:0,60,1451	1/1:0,24:24:69.21:1197,69,0	1/1:0,20:20:39.13:727,39,0	1/1:0,25:25:66.21:1193,66,0	1/1:0,18:18:45.15:837,45,0	1/1:0,30:30:81.28:1509,81,0	1/1:0,32:32:78.10:1454,78,0	1/1:0,30:30:81.28:1470,81,0	1/1:0,37:37:93.32:1713,93,0	1/1:0,24:24:66.23:1230,66,0	1/1:0,23:23:66.23:1230,66,0	1/1:0,23:23:57.20:1063,57,0	0/0:25,0:25:75.26:0,75,1849	0/0:17,0:17:48.15:0,48,1130	0/0:52,0:52:99:0,157,3789	1/1:0,17:17:38.78:705,39,0	1/1:1,15:16:23.86:446,24,0	1/1:0,29:29:63.21:1174,63,0	1/1:0,21:21:51.17:910,51,0	1/1:0,39:39:99:2169,117,0	0/0:24,0:23:72.23:0,72,1723	1/1:0,10:10:30.10:559,30,0
chr10	47014159	.	T	TGGGG	2579.89	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=7.263;DP=518;FS=0.000;HRun=8;HaplotypeScore=92.1628;InbreedingCoeff=0.9335;MQ=87.36;MQ0=0;MQRankSum=-2.790;QD=15.18;ReadPosRankSum=-1.892;VQSLOD=-0.4164;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:96.20:0,96,1400	1/1:1,0:9:14.96:168,15,0	0/0:26,0:26:48.04:0,48,667	0/0:17,0:18:33.94:0,34,467	1/1:6,3:11:5.09:62,5,0	0/0:23,0:22:54.16:0,54,796	0/0:33,0:33:84.17:0,84,1163	1/1:18,0:21:23.98:254,24,0	0/0:16,0:17:42.09:0,42,614	1/1:4,0:13:23.98:287,24,0	1/1:4,0:4:9.01:123,9,0	0/0:18,0:18:48.15:0,48,725	0/0:25,0:25:69.20:0,69,1001	1/1:4,1:18:14.96:239,15,0	1/1:3,0:26:36.50:429,36,0	1/1:10,1:11:21.04:322,21,0	1/1:4,6:12:18.03:353,18,0	1/1:2,0:11:18.03:209,18,0	0/0:16,0:16:42.10:0,42,566	0/0:26,0:26:66.14:0,66,936	0/0:17,0:17:42.12:0,42,636	0/0:18,0:18:51.16:0,51,751	0/0:23,0:23:66.20:0,66,999	0/0:22,0:22:63.19:0,63,932	1/1:4,9:18:5.93:91,6,0	1/1:4,1:8:11.99:155,12,0	0/0:28,0:28:78.25:0,78,1175	1/1:1,1:8:6.02:111,6,0
chr10	47016210	.	G	GA	3820.27	PASS	AB=0.578;AC=29;AF=0.518;AN=56;BaseQRankSum=-10.906;DP=517;FS=0.000;HRun=10;HaplotypeScore=72.6954;InbreedingCoeff=0.8370;MQ=57.90;MQ0=16;MQRankSum=0.181;QD=16.90;ReadPosRankSum=2.526;VQSLOD=4.1613;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,13:21:35.07:465,35,0	1/1:0,9:9:21.05:221,21,0	0/0:23,0:7:1.91:0,2,28	0/0:27,0:7:2.85:0,3,22	0/0:26,0:26:65.81:0,66,527	0/1:7,19:26:10.18:313,0,10	1/1:4,11:15:26.96:271,27,0	0/0:34,0:33:58.76:0,59,525	1/1:3,10:12:15.04:160,15,0	0/0:18,0:18:44.89:0,45,365	0/0:15,0:15:28.18:0,28,221	1/1:3,10:13:21.05:224,21,0	1/1:1,11:12:14.73:160,15,0	0/0:19,0:17:47.89:0,48,387	1/1:3,9:12:12.03:126,12,0	0/0:13,0:13:26.93:0,27,218	0/0:28,0:27:36.25:0,36,472	0/0:18,0:18:43.89:0,44,347	1/1:6,13:18:44.68:438,45,0	1/1:6,9:14:21.02:213,21,0	1/1:3,7:10:12.02:121,12,0	1/1:0,6:6:18.05:191,18,0	1/1:5,10:15:1.73:144,2,0	1/1:0,12:12:30.07:319,30,0	0/0:28,0:25:50.27:0,50,452	0/0:25,0:24:56.31:0,56,446	1/1:5,22:26:23.47:454,23,0	0/0:15,0:14:41.88:0,42,335
chr10	47016221	.	GA	G	4708.35	PASS	AB=0.600;AC=21;AF=0.375;AN=56;BaseQRankSum=-7.815;DP=537;FS=0.000;HRun=10;HaplotypeScore=77.5317;InbreedingCoeff=0.9404;MQ=66.08;MQ0=11;MQRankSum=0.165;QD=19.54;ReadPosRankSum=0.131;VQSLOD=5.3976;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:22:48.98:0,49,257	0/0:9,0:9:24.06:0,24,260	0/0:40,1:16:16.06:0,16,221	0/0:31,0:12:7.46:0,7,30	1/1:1,25:26:68.98:598,69,0	0/0:23,0:23:48.13:0,48,528	0/0:16,0:16:36.36:0,36,377	1/1:11,20:30:74.66:647,75,0	0/0:12,0:12:21.06:0,21,230	1/1:0,21:21:62.99:546,63,0	1/1:1,12:13:29.98:259,30,0	0/0:13,0:13:27.06:0,27,297	0/0:15,0:15:27.07:0,27,296	1/1:6,14:19:32.99:286,33,0	0/0:10,0:10:14.99:0,15,143	1/1:0,13:13:26.99:234,27,0	1/1:9,16:26:63.80:528,64,0	0/1:6,12:17:0.23:227,0,0	0/0:22,0:20:41.17:0,41,461	0/0:11,0:10:27.07:0,27,295	0/0:10,1:11:15.02:0,15,153	0/0:6,0:6:18.05:0,18,198	0/0:13,0:13:23.62:0,24,265	0/0:13,0:13:36.05:0,36,377	1/1:6,20:23:37.32:449,37,0	1/1:3,24:26:65.95:569,66,0	0/0:25,0:27:59.73:0,60,585	1/1:1,19:19:41.99:365,42,0
chr10	47016584	.	GATTT	G	2680.39	PASS	AB=0.595;AC=22;AF=0.407;AN=54;BaseQRankSum=9.788;DP=367;FS=2.693;HRun=0;HaplotypeScore=52.5546;InbreedingCoeff=0.6555;MQ=56.02;MQ0=5;MQRankSum=2.240;QD=20.94;ReadPosRankSum=5.188;VQSLOD=2.6827;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,23:27:19.14:602,19,0	0/0:5,0:5:15.04:0,15,325	0/0:8,0:3:0:0,0,0	0/0:18,0:4:4.41:0,4,15	0/0:16,0:16:36.11:0,36,853	0/1:2,21:20:23.98:778,0,24	0/1:2,2:4:45.80:46,0,61	0/0:43,0:42:81.23:0,81,1862	1/1:2,5:6:12.04:207,12,0	0/0:12,0:12:30.10:0,30,711	0/0:6,0:6:15.05:0,15,379	1/1:2,5:5:3.01:52,3,0	1/1:0,5:4:9.03:156,9,0	0/0:12,0:12:33.11:0,33,812	0/0:8,0:8:15.05:0,15,377	0/0:5,0:4:12.04:0,12,303	0/0:28,0:27:72.25:0,72,1815	0/0:18,0:18:42.13:0,42,968	1/1:7,12:15:23.82:415,24,0	1/1:3,3:5:3.01:52,3,0	1/1:3,4:7:3.01:52,3,0	1/1:1,2:2:3.01:52,3,0	./.	1/1:2,2:4:6.02:104,6,0	0/0:17,0:15:36.12:0,36,910	0/0:16,0:14:36.09:0,36,808	1/1:5,8:12:21.07:353,21,0	0/0:26,0:26:54.19:0,54,1365
chr10	47016914	.	A	ACC	507.31	PASS	AB=0.925;AC=15;AF=0.268;AN=56;BaseQRankSum=2.680;DP=373;FS=51.338;HRun=0;HaplotypeScore=59.6119;InbreedingCoeff=0.2394;MQ=51.77;MQ0=48;MQRankSum=-0.082;QD=4.34;ReadPosRankSum=3.687;VQSLOD=-0.2529;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:16,0:12:4.72:5,0,24	0/0:4,0:4:10.58:0,11,115	0/0:51,0:13:21.61:0,22,300	0/0:46,0:15:0.48:0,0,141	0/0:12,0:12:18.76:0,19,141	0/1:7,0:7:8.55:9,0,34	0/0:10,0:8:2.56:0,3,6	0/0:19,0:12:13.09:0,13,89	1/1:6,2:7:18.02:199,18,0	0/0:16,0:14:31.19:0,31,277	0/0:13,0:10:16.41:0,16,186	0/1:6,2:7:1.34:154,0,1	0/1:5,1:4:4.54:86,0,5	0/0:3,0:3:3.11:0,3,7	0/1:9,0:10:4.34:4,0,42	0/0:8,0:4:3.11:0,3,8	0/1:23,0:18:3.69:4,0,126	0/0:14,0:11:6.56:0,7,24	0/0:16,0:10:9.64:0,10,83	0/0:6,0:6:9.16:0,9,48	0/1:10,0:8:10.97:11,0,49	1/1:3,0:2:6.02:74,6,0	0/1:4,0:3:0:0,0,0	1/1:7,0:4:9.02:98,9,0	0/0:13,0:9:1.25:0,1,3	0/0:11,0:9:19.74:0,20,180	0/0:14,0:11:9.35:0,9,32	0/1:11,0:5:11.12:11,0,16
chr10	47016915	.	A	ACG	852.92	PASS	AB=0.809;AC=17;AF=0.304;AN=56;BaseQRankSum=0.077;DP=378;FS=10.521;HRun=0;HaplotypeScore=58.2194;InbreedingCoeff=-0.0354;MQ=52.01;MQ0=47;MQRankSum=0.039;QD=5.14;ReadPosRankSum=2.578;VQSLOD=0.7058;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:12:4.67:0,5,66	0/0:4,0:4:9.91:0,10,111	0/0:51,0:13:3.57:0,4,261	0/0:48,0:16:21.72:0,22,173	0/1:6,6:12:77.95:78,0,87	0/1:7,0:7:3.36:3,0,34	0/0:10,0:8:3.07:0,3,8	0/1:12,6:13:29.80:251,0,30	0/1:8,0:7:1.34:19,0,1	0/1:12,4:15:99:104,0,175	0/1:10,2:10:66.71:67,0,144	0/0:8,0:7:4.13:0,4,30	0/1:7,0:4:3.51:4,0,24	0/1:1,3:4:11.10:53,0,11	0/1:12,0:10:1.68:2,0,41	1/1:3,4:4:6:63,6,0	0/1:9,14:19:85.77:193,0,86	1/1:4,10:11:8.07:78,8,0	0/0:16,0:11:6.68:0,7,73	0/0:5,0:5:4.31:0,4,14	0/0:10,0:8:6.46:0,6,46	0/0:3,0:2:1.72:0,2,4	0/0:4,0:3:2.50:0,2,9	0/0:8,0:5:0.28:0,0,1	0/0:7,6:10:0.89:0,1,2	0/1:7,3:9:42.89:43,0,137	0/0:14,0:11:10.93:0,11,30	1/1:7,3:4:0.65:35,1,0
chr10	47017899	.	T	TC	1487.60	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=1.272;DP=516;FS=1.440;HRun=0;HaplotypeScore=100.9011;InbreedingCoeff=0.9365;MQ=64.23;MQ0=6;MQRankSum=-0.666;QD=11.62;ReadPosRankSum=2.833;VQSLOD=3.9175;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:24:43.40:287,43,0	0/0:9,0:9:25.19:0,25,253	0/0:23,0:10:16.88:0,17,165	0/0:13,0:8:5.42:0,5,128	0/0:29,0:29:83.72:0,84,826	1/1:6,16:21:38.40:414,38,0	1/1:13,1:14:16.63:104,17,0	0/0:28,0:28:68.85:0,69,695	0/0:15,0:15:33.45:0,33,336	0/0:25,0:24:63.03:0,63,623	0/0:11,0:11:31.29:0,31,316	0/0:19,0:19:47.52:0,48,425	0/0:14,0:14:32.91:0,33,296	0/0:12,0:12:28.31:0,28,328	0/0:20,0:20:53.99:0,54,617	0/0:28,0:28:78.52:0,79,996	0/0:33,0:32:71.57:0,72,747	0/0:18,0:16:28.58:0,29,337	1/1:20,1:20:25.81:287,26,0	1/1:14,0:14:5.06:199,5,0	1/1:10,0:10:26.15:168,26,0	0/0:8,0:8:11.98:0,12,111	0/0:12,0:12:24.57:0,25,199	0/0:18,0:16:35.11:0,35,385	0/0:18,0:18:41.89:0,42,485	0/0:29,0:29:77.63:0,78,901	1/1:20,3:22:12.03:219,12,0	0/0:6,0:6:15.02:0,15,160
chr10	47017910	.	TTTG	T	488.20	PASS	AB=0.982;AC=10;AF=0.179;AN=56;BaseQRankSum=0.808;DP=511;FS=22.922;HRun=0;HaplotypeScore=109.9810;InbreedingCoeff=-0.0106;MQ=54.56;MQ0=9;MQRankSum=-5.678;QD=3.11;ReadPosRankSum=-2.374;VQSLOD=0.1162;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:23,1:24:50.41:271,50,0	0/0:8,0:8:23.99:0,24,400	0/0:17,0:6:2.91:0,3,28	0/0:9,0:4:4.83:0,5,44	0/0:26,0:26:57.81:0,58,988	0/1:25,0:24:55.33:55,0,73	0/1:15,0:15:43.37:73,0,43	0/0:28,0:27:72.14:0,72,933	0/1:15,0:15:8.93:9,0,188	0/0:20,0:18:41.42:0,41,574	0/0:7,0:7:18.05:0,18,300	0/0:17,0:17:11.83:0,12,226	0/1:14,0:14:46.13:46,0,124	0/0:13,0:13:33.01:0,33,493	0/0:21,0:21:59.98:0,60,962	0/0:33,0:33:95.85:0,96,1633	0/0:34,0:33:75.11:0,75,1090	0/0:22,0:19:20.28:0,20,564	0/1:15,2:16:67.30:67,0,102	0/1:13,0:12:26.73:27,0,55	0/0:6,1:7:6.55:0,7,32	0/1:7,0:7:22.23:22,0,27	0/0:11,0:11:13.87:0,14,90	0/0:20,0:18:25:0,25,362	0/0:20,0:20:51.12:0,51,787	0/0:37,0:36:99:0,108,1544	0/1:26,1:26:64.98:65,0,201	0/0:4,0:4:11.88:0,12,159
chr10	47017911	.	TTG	T	1048.96	PASS	AB=0.989;AC=17;AF=0.304;AN=56;BaseQRankSum=3.152;DP=508;FS=11.701;HRun=0;HaplotypeScore=99.9534;InbreedingCoeff=0.2199;MQ=54.57;MQ0=10;MQRankSum=-3.171;QD=5.35;ReadPosRankSum=-0.711;VQSLOD=2.1357;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:24:59.14:398,59,0	0/0:8,0:8:22.25:0,22,298	0/0:15,0:5:2.96:0,3,22	0/0:7,0:3:2.99:0,3,24	0/0:24,0:24:60.05:0,60,789	1/1:22,3:24:33.46:231,33,0	0/1:14,1:15:2.26:113,0,2	0/0:28,0:27:71.73:0,72,722	0/1:16,0:16:38.90:39,0,75	0/0:19,0:17:38.75:0,39,392	0/0:6,0:6:17.96:0,18,230	0/1:16,0:16:8.02:8,0,101	0/1:14,0:14:48.71:49,0,52	0/0:14,0:14:35.86:0,36,389	0/0:22,0:22:62.84:0,63,800	0/0:33,0:33:95.64:0,96,1290	0/0:34,0:33:71.87:0,72,821	0/0:22,0:19:20.13:0,20,449	0/1:17,0:16:15.29:78,0,15	0/1:13,0:12:4.61:50,0,5	1/1:8,0:7:7.39:28,7,0	1/1:7,0:7:0.55:68,1,0	0/1:10,0:10:33.09:33,0,37	0/0:22,0:20:3.67:0,4,163	0/0:21,0:21:53.94:0,54,625	0/0:37,0:36:99:0,104,1246	0/1:26,1:26:32.59:119,0,33	0/1:4,0:4:0.81:1,0,104
chr10	47017912	.	TG	T	1992.06	PASS	AB=0.941;AC=25;AF=0.446;AN=56;BaseQRankSum=4.671;DP=499;FS=10.449;HRun=3;HaplotypeScore=88.6724;InbreedingCoeff=0.8557;MQ=53.48;MQ0=10;MQRankSum=-2.879;QD=9.49;ReadPosRankSum=0.690;VQSLOD=0.3417;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,15:24:59.28:580,59,0	0/0:9,0:9:26.21:0,26,243	0/0:15,0:5:2.99:0,3,23	0/0:6,0:2:0:0,0,0	0/0:23,0:23:51.29:0,51,480	1/1:24,0:23:52.29:301,52,0	1/1:14,0:14:27.65:153,28,0	0/0:28,0:27:57.48:0,57,488	1/1:15,1:16:20.54:132,21,0	0/0:16,0:14:28.27:0,28,234	0/0:6,0:6:14.77:0,15,155	0/1:15,1:16:2.56:56,0,3	1/1:14,0:14:13.76:112,14,0	0/0:14,0:14:31.01:0,31,236	0/0:22,0:22:59.52:0,60,573	0/0:33,0:33:93.70:0,94,937	0/0:34,0:33:57.29:0,57,527	0/0:22,0:19:12.72:0,13,307	1/1:15,1:16:34.90:210,35,0	1/1:11,1:12:19.71:121,20,0	1/1:7,1:7:14.30:91,14,0	1/1:8,0:8:13.02:83,13,0	1/1:9,1:10:5.66:61,6,0	1/1:19,1:19:7.10:49,7,0	0/0:21,0:21:47.08:0,47,430	0/0:36,0:35:97.41:0,97,903	1/1:27,0:26:51.73:255,52,0	0/0:4,0:4:10.21:0,10,70
chr10	47018736	.	C	CCTGT	5024.38	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-9.980;DP=827;FS=1.532;HRun=0;HaplotypeScore=133.5758;InbreedingCoeff=0.9985;MQ=78.59;MQ0=0;MQRankSum=-1.287;QD=59.81;ReadPosRankSum=0.715;VQSLOD=6.6597;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,33:39:93.32:2294,93,0	0/0:12,0:12:36.12:0,36,655	0/0:10,0:10:21.07:0,21,376	0/0:27,0:27:38.51:0,39,767	0/0:32,0:32:81.27:0,81,1438	1/1:1,19:21:57.20:1474,57,0	1/1:2,19:24:48.16:1257,48,0	0/0:37,0:37:87.28:0,87,1515	0/0:37,0:37:99:0,105,1909	0/0:36,0:36:99:0,99,1739	0/0:28,0:28:69.22:0,69,1185	0/0:39,0:39:99:0,114,2028	0/0:26,0:26:63.20:0,63,1115	0/0:29,0:29:81.28:0,81,1468	0/0:41,0:41:99:0,117,2121	0/0:29,0:29:75.24:0,75,1328	0/0:21,0:21:60.21:0,60,1078	0/0:18,0:18:48.16:0,48,873	0/0:20,0:20:51.17:0,51,919	0/0:32,0:32:93.32:0,93,1685	0/0:40,0:40:99:0,108,1950	0/0:26,0:26:75.26:0,75,1364	0/0:28,0:28:75.25:0,75,1329	0/0:37,0:37:99:0,105,1839	0/0:34,0:34:90.30:0,90,1609	0/0:45,0:45:99:0,120,2155	0/0:32,0:32:93.31:0,93,1663	0/0:27,0:27:60.17:0,60,1056
chr10	47019525	.	A	AT	15328.69	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-2.828;DP=558;FS=2.039;HRun=8;HaplotypeScore=96.1852;InbreedingCoeff=0.8558;MQ=68.01;MQ0=0;MQRankSum=-3.447;QD=28.39;ReadPosRankSum=1.140;VQSLOD=4.6147;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,25:27:66.03:741,66,0	1/1:0,11:11:30.09:346,30,0	0/0:12,0:10:7.98:0,8,53	0/0:5,0:3:3:0,3,27	1/1:2,35:37:99:1175,102,0	1/1:1,23:24:51.15:589,51,0	1/1:4,14:18:33.10:381,33,0	1/1:6,34:40:99:1177,102,0	1/1:0,14:14:39.12:450,39,0	1/1:1,21:22:63.14:694,63,0	1/1:5,18:24:48.06:523,48,0	1/1:0,22:22:60.18:691,60,0	1/1:2,17:19:51.15:588,51,0	1/1:4,13:17:39.12:450,39,0	1/1:0,14:14:39.12:450,39,0	1/1:2,17:19:42.12:485,42,0	1/1:3,14:17:39.12:450,39,0	1/1:4,17:21:42.12:485,42,0	1/1:1,14:15:42.12:485,42,0	1/1:2,26:28:81.20:918,81,0	1/1:2,12:14:33.10:381,33,0	1/1:1,9:10:27.08:312,27,0	1/1:2,20:22:60.17:686,60,0	1/1:1,18:19:42.12:485,42,0	1/1:3,27:30:75.18:851,75,0	1/1:5,18:23:55.37:602,55,0	1/1:3,21:24:54.63:624,55,0	1/1:0,9:9:27.08:312,27,0
chr10	47019640	.	G	GAGGA	9375.82	PASS	AB=0.800;AC=50;AF=0.962;AN=52;BaseQRankSum=0.437;DP=630;FS=0.000;HRun=0;HaplotypeScore=136.2183;InbreedingCoeff=-0.0443;MQ=65.05;MQ0=4;MQRankSum=-0.290;QD=15.86;ReadPosRankSum=-0.890;VQSLOD=4.1684;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:21,1:22:27.03:352,27,0	1/1:4,0:4:3:26,3,0	./.	./.	1/1:21,2:22:32.89:355,33,0	1/1:19,10:29:20.82:436,21,0	0/1:28,0:28:11.32:259,0,11	1/1:23,0:20:2.97:20,3,0	1/1:32,0:33:62.94:789,63,0	1/1:18,2:20:27.08:461,27,0	0/1:4,5:12:3.99:203,0,4	1/1:26,0:28:39.09:487,39,0	1/1:26,0:32:54.08:726,54,0	1/1:22,2:24:36.07:546,36,0	1/1:21,0:37:12.04:169,12,0	1/1:24,3:27:45.08:738,45,0	1/1:22,2:24:18.01:225,18,0	1/1:22,0:22:21.02:287,21,0	1/1:12,1:12:15.04:299,15,0	1/1:9,9:20:32.94:458,33,0	1/1:25,0:25:21:219,21,0	1/1:15,0:16:20.97:236,21,0	1/1:15,0:16:17.95:187,18,0	1/1:18,0:27:14.94:199,15,0	1/1:19,2:21:27.05:361,27,0	1/1:30,1:31:39.08:698,39,0	1/1:23,1:23:35.93:377,36,0	1/1:7,2:9:18.02:260,18,0
chr10	47019688	.	A	AAGCT	4959.27	PASS	AB=1.000;AC=27;AF=0.482;AN=56;BaseQRankSum=3.183;DP=688;FS=25.993;HRun=0;HaplotypeScore=190.7322;InbreedingCoeff=-0.2074;MQ=63.46;MQ0=3;MQRankSum=-4.811;QD=9.32;ReadPosRankSum=8.662;VQSLOD=1.9880;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:30:60:60,0,87	0/0:9,0:8:18.05:0,18,191	0/0:15,0:10:27.05:0,27,380	0/0:18,0:16:41.23:0,41,682	0/1:23,0:22:45.17:45,0,59	0/1:28,0:28:41.08:41,0,432	0/0:44,0:44:99:0,123,1231	0/0:37,0:32:42.06:0,42,290	1/1:36,0:36:48.79:1097,49,0	0/1:26,0:26:92.17:116,0,92	0/1:22,0:22:43.89:59,0,44	1/1:45,0:45:51.43:1439,51,0	1/1:17,13:32:26.20:497,26,0	0/1:27,0:27:24.19:136,0,24	0/0:33,0:33:48.57:0,49,639	0/1:24,0:24:47.61:163,0,48	0/1:17,0:17:17.63:18,0,92	1/1:18,0:18:2.47:39,2,0	0/1:16,0:14:76.07:76,0,95	0/1:19,0:18:39.03:62,0,39	0/1:35,0:35:34.95:37,0,35	0/1:10,0:10:4.89:215,0,5	0/1:21,0:19:8.24:46,0,8	1/1:20,0:20:29.49:519,29,0	0/1:19,0:19:36.84:45,0,37	0/1:28,0:28:70.17:186,0,70	0/1:24,0:23:9.18:9,0,86	0/1:12,0:12:53.70:54,0,60
chr10	47019689	.	A	AGCTA	4956.29	PASS	AB=0.981;AC=27;AF=0.482;AN=56;BaseQRankSum=3.210;DP=692;FS=27.428;HRun=0;HaplotypeScore=190.9097;InbreedingCoeff=-0.2074;MQ=64.23;MQ0=3;MQRankSum=-5.750;QD=9.26;ReadPosRankSum=8.339;VQSLOD=2.0281;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:30:60:60,0,87	0/0:9,0:8:18.05:0,18,191	0/0:16,0:11:27.05:0,27,380	0/0:18,0:16:41.23:0,41,682	0/1:22,0:21:45.17:45,0,59	0/1:28,0:28:41.08:41,0,432	0/0:43,0:43:99:0,123,1231	0/0:38,0:33:42.06:0,42,290	1/1:37,0:37:48.79:1097,49,0	0/1:27,0:27:99:113,0,113	0/1:21,0:21:43.89:59,0,44	1/1:46,0:46:51.43:1439,51,0	1/1:32,0:32:26.20:497,26,0	0/1:29,0:29:24.19:136,0,24	0/0:33,0:33:48.57:0,49,639	0/1:23,0:23:47.61:163,0,48	0/1:17,0:17:17.63:18,0,92	1/1:19,0:19:2.47:39,2,0	0/1:16,0:14:76.07:76,0,95	0/1:19,0:18:39.03:62,0,39	0/1:35,0:35:34.95:37,0,35	0/1:10,0:10:4.89:215,0,5	0/1:11,9:19:8.24:46,0,8	1/1:20,0:20:29.49:519,29,0	0/1:19,0:19:36.84:45,0,37	0/1:28,0:28:70.17:186,0,70	0/1:24,0:23:9.18:9,0,86	0/1:12,0:12:53.70:54,0,60
chr10	47019692	.	A	AAGCT	14360.47	PASS	AB=1.000;AC=51;AF=0.911;AN=56;BaseQRankSum=-1.307;DP=699;FS=15.650;HRun=0;HaplotypeScore=161.4162;InbreedingCoeff=0.7375;MQ=66.01;MQ0=3;MQRankSum=-5.674;QD=21.66;ReadPosRankSum=1.916;VQSLOD=3.8463;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:30:57.07:805,57,0	0/1:7,0:7:0.69:2,0,1	0/0:16,0:11:33.03:0,33,404	0/0:20,0:18:41.19:0,41,595	1/1:6,17:23:44.85:537,45,0	1/1:28,0:28:33.77:557,34,0	1/1:43,0:43:12.85:183,13,0	1/1:38,0:35:90.25:1354,90,0	1/1:31,0:36:83.86:1289,84,0	1/1:7,24:32:81.04:1117,81,0	1/1:20,1:21:45.14:695,45,0	1/1:44,0:47:99:1546,102,0	1/1:26,0:31:26.95:524,27,0	1/1:7,20:29:20.68:336,21,0	1/1:32,0:32:14.85:172,15,0	1/1:19,3:22:63.13:1041,63,0	1/1:15,2:17:26.83:351,27,0	1/1:4,15:19:5.99:97,6,0	1/1:14,1:15:41.97:569,42,0	1/1:19,1:19:30.03:433,30,0	1/1:7,29:37:6.02:153,6,0	1/1:6,0:10:15.04:234,15,0	1/1:18,0:19:11.36:87,11,0	1/1:17,0:21:38.98:555,39,0	1/1:6,12:20:11.97:167,12,0	1/1:9,17:29:71.69:965,72,0	1/1:7,15:22:3.01:77,3,0	1/1:10,2:12:33.06:514,33,0
chr10	47019921	.	GGAGA	G	4349.80	PASS	AC=44;AF=0.880;AN=50;BaseQRankSum=-2.570;DP=492;FS=17.623;HRun=0;HaplotypeScore=106.7296;InbreedingCoeff=0.7070;MQ=78.60;MQ0=5;MQRankSum=-4.404;QD=11.95;ReadPosRankSum=2.349;VQSLOD=3.0230;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:31,0:31:37.56:340,38,0	./.	0/0:47,0:27:53.60:0,54,636	0/0:48,0:33:8.10:0,8,680	1/1:17,0:17:9.03:139,9,0	1/1:10,0:10:15.04:183,15,0	1/1:20,0:20:19.96:192,20,0	1/1:14,0:14:26.87:358,27,0	1/1:22,0:22:25.10:314,25,0	1/1:13,0:13:18.06:284,18,0	./.	1/1:19,0:19:16.20:210,16,0	1/1:14,0:14:6.02:83,6,0	1/1:16,0:16:12.03:174,12,0	0/0:18,0:18:4.23:0,4,27	1/1:21,0:21:20.93:265,21,0	1/1:11,12:23:14.36:340,14,0	1/1:8,4:11:6.02:110,6,0	1/1:11,0:12:21.30:179,21,0	1/1:16,0:17:8.57:96,9,0	1/1:24,0:24:14.41:134,14,0	1/1:14,0:14:9.03:112,9,0	1/1:11,0:11:15.03:181,15,0	1/1:20,0:19:17.73:252,18,0	1/1:9,2:11:4.26:53,4,0	1/1:14,1:14:18.02:256,18,0	1/1:8,0:8:14.72:95,15,0	./.
chr10	47019923	.	AGAGAGAGG	A	3779.41	PASS	AB=1.000;AC=23;AF=0.426;AN=54;BaseQRankSum=-0.358;DP=477;FS=6.465;HRun=0;HaplotypeScore=131.2190;InbreedingCoeff=0.4310;MQ=77.43;MQ0=5;MQRankSum=-5.317;QD=17.91;ReadPosRankSum=4.894;VQSLOD=2.1124;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:4,25:29:39.13:946,39,0	0/0:2,0:2:2.99:0,3,24	0/0:44,0:24:38.77:0,39,896	0/0:50,0:35:58.23:0,58,1110	0/0:14,0:14:4.29:0,4,39	1/1:0,11:11:15.05:320,15,0	1/1:2,18:20:19.93:485,20,0	0/1:13,0:13:49.27:56,0,49	0/0:21,0:21:2.86:0,3,17	0/1:13,0:13:58.82:94,0,59	0/0:7,0:7:2.96:0,3,19	0/0:18,0:18:4.74:0,5,15	1/1:13,0:13:2.84:38,3,0	0/1:16,0:16:14.45:31,0,14	0/0:17,0:17:42.39:0,42,400	0/0:23,0:23:21.54:0,22,141	0/0:22,0:22:22.20:0,22,176	0/0:11,0:10:11.99:0,12,100	1/1:9,4:13:29.94:602,30,0	1/1:5,11:16:14.97:289,15,0	1/1:4,20:25:23.80:396,24,0	0/0:12,0:12:8.39:0,8,85	0/1:9,0:9:8.12:8,0,57	0/0:20,0:19:2.62:0,3,6	1/1:10,0:10:2.99:24,3,0	0/1:15,0:14:32.47:51,0,32	1/1:1,7:8:18.06:439,18,0	./.
chr10	47019925	.	AGAGAG	A	4706.08	PASS	AB=0.933;AC=39;AF=0.750;AN=52;BaseQRankSum=-2.849;DP=404;FS=18.559;HRun=0;HaplotypeScore=97.8631;InbreedingCoeff=0.4141;MQ=83.18;MQ0=6;MQRankSum=-5.415;QD=16.63;ReadPosRankSum=5.207;VQSLOD=2.9376;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:25:38.70:399,39,0	./.	0/0:43,0:25:59.73:0,60,729	0/0:50,0:36:34.55:0,35,928	1/1:8,0:8:9:132,9,0	1/1:11,0:11:15.05:190,15,0	1/1:18,0:18:19.53:217,20,0	1/1:12,0:13:4.80:314,5,0	1/1:3,12:15:25.04:467,25,0	0/1:10,0:11:5.28:293,0,5	0/0:5,0:5:1.82:0,2,5	1/1:1,14:17:16.27:308,16,0	1/1:1,7:9:6.02:114,6,0	0/1:7,0:8:8.95:159,0,9	0/0:15,0:15:9.33:0,9,57	0/1:8,4:12:4.99:204,0,5	1/1:17,0:17:20.93:214,21,0	1/1:6,0:5:5.98:46,6,0	0/1:13,0:13:2.17:163,0,2	0/1:12,0:12:3.12:98,0,3	1/1:24,0:24:14.24:146,14,0	1/1:7,6:12:9.03:161,9,0	1/1:9,0:9:15.05:255,15,0	1/1:1,17:17:17.66:400,18,0	1/1:6,1:7:4.26:53,4,0	1/1:3,7:9:18:249,18,0	1/1:7,0:7:14.51:126,15,0	./.
chr10	47019926	.	GAGA	G	3875.69	PASS	AC=46;AF=0.885;AN=52;BaseQRankSum=-2.467;DP=392;FS=15.924;HRun=0;HaplotypeScore=91.8777;InbreedingCoeff=0.7167;MQ=84.17;MQ0=6;MQRankSum=-5.161;QD=13.89;ReadPosRankSum=4.140;VQSLOD=1.7977;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:25:37.53:302,38,0	./.	0/0:48,0:26:61.05:0,61,634	0/0:48,0:36:24.45:0,24,784	1/1:7,0:7:9.03:110,9,0	1/1:11,0:11:15.02:176,15,0	1/1:18,0:18:19.61:172,20,0	1/1:11,1:12:26.92:360,27,0	1/1:14,1:15:25.09:276,25,0	1/1:9,0:10:18.06:272,18,0	1/1:1,4:5:1.55:4,2,0	1/1:17,0:17:16.20:187,16,0	1/1:8,1:9:6.02:71,6,0	1/1:8,0:8:12.03:174,12,0	0/0:9,0:9:3.97:0,4,27	1/1:11,1:12:18.60:190,19,0	1/1:15,1:17:21.94:229,22,0	1/1:6,0:5:6.02:64,6,0	1/1:13,0:13:27.52:180,28,0	1/1:12,0:12:10.42:100,10,0	1/1:23,1:24:19.11:145,19,0	1/1:8,1:8:9.02:100,9,0	1/1:5,2:7:15.02:171,15,0	1/1:18,0:17:17.85:216,18,0	1/1:7,0:7:4.26:53,4,0	1/1:10,0:9:18.02:227,18,0	1/1:7,0:7:17.15:96,17,0	./.
chr10	47019940	.	GA	G	133.16	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=0.685;DP=458;FS=18.648;HRun=1;HaplotypeScore=97.4946;InbreedingCoeff=0.7626;MQ=68.66;MQ0=8;MQRankSum=-2.688;QD=11.10;ReadPosRankSum=-0.810;VQSLOD=0.4437;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:41.57:0,42,231	1/1:2,0:2:5.99:50,6,0	0/0:41,0:22:37.68:0,38,421	0/0:49,1:28:30.07:0,30,500	0/0:9,0:9:14.79:0,15,107	0/0:10,0:10:8.74:0,9,62	0/0:20,0:20:24.48:0,24,144	0/0:18,1:18:41.84:0,42,407	0/0:17,0:18:20.32:0,20,150	0/0:13,0:13:35.69:0,36,325	0/0:8,0:8:20.99:0,21,189	0/0:19,0:19:7.95:0,8,66	0/0:7,0:7:8.74:0,9,51	0/0:6,0:6:15.01:0,15,155	1/1:10,0:10:23.68:194,24,0	0/0:20,1:21:47.29:0,47,485	0/0:19,0:19:44.65:0,45,376	0/0:9,0:8:17.95:0,18,163	0/0:17,0:17:31.70:0,32,238	0/0:14,0:14:14.31:0,14,125	0/0:25,0:25:10.01:0,10,48	0/0:9,1:9:9.40:0,9,72	0/0:14,0:14:18.99:0,19,153	0/0:20,0:19:27.14:0,27,160	0/0:9,0:9:11.97:0,12,103	0/0:18,0:17:44.50:0,45,386	0/0:10,0:10:20.91:0,21,104	0/0:8,0:8:20.95:0,21,221
chr10	47020279	.	AC	A	4942.12	PASS	AB=0.971;AC=53;AF=0.946;AN=56;BaseQRankSum=-3.633;DP=407;FS=15.057;HRun=1;HaplotypeScore=75.4381;InbreedingCoeff=0.3950;MQ=64.63;MQ0=4;MQRankSum=-0.513;QD=13.29;ReadPosRankSum=-0.487;VQSLOD=2.3851;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:18,6:23:57.15:448,57,0	1/1:0,1:8:11.88:81,12,0	0/1:33,1:16:6.60:7,0,164	0/0:35,0:21:22.22:0,22,282	1/1:17,7:24:54.25:423,54,0	1/1:0,14:14:5.93:44,6,0	1/1:1,4:4:12:108,12,0	1/1:18,3:19:44.21:374,44,0	1/1:6,0:6:13.23:92,13,0	1/1:20,3:23:44.88:396,45,0	1/1:0,13:13:14.91:136,15,0	1/1:3,0:3:5.03:32,5,0	1/1:2,1:3:6.25:29,6,0	1/1:0,6:6:5.92:39,6,0	1/1:1,0:7:11.83:78,12,0	1/1:9,3:10:29.91:249,30,0	1/1:23,10:32:83.68:696,84,0	1/1:0,16:16:11.99:119,12,0	1/1:1,3:13:23.86:189,24,0	1/1:12,4:16:33.25:254,33,0	1/1:0,3:3:2.97:20,3,0	1/1:3,0:3:6.03:28,6,0	1/1:11,1:12:2.97:20,3,0	1/1:3,0:2:1.55:4,2,0	1/1:0,18:18:11.91:88,12,0	1/1:14,6:17:47.78:414,48,0	1/1:15,1:16:44.77:363,45,0	1/1:9,3:9:26.88:212,27,0
chr10	47020282	.	AAAC	A	2890.70	PASS	AB=1.000;AC=39;AF=0.696;AN=56;BaseQRankSum=-6.428;DP=420;FS=9.991;HRun=0;HaplotypeScore=94.1789;InbreedingCoeff=0.3807;MQ=64.53;MQ0=3;MQRankSum=-1.843;QD=8.63;ReadPosRankSum=-4.331;VQSLOD=0.6455;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:21,2:22:50.31:413,50,0	1/1:7,1:8:11.59:85,12,0	0/0:33,0:15:23.22:0,23,255	0/0:36,0:22:34.99:0,35,467	1/1:26,0:26:3.85:272,4,0	1/1:13,2:14:6.01:57,6,0	1/1:3,3:5:11.03:120,11,0	0/1:21,0:18:20.55:147,0,21	0/0:5,0:5:7.89:0,8,59	1/1:25,0:25:14.55:226,15,0	0/1:14,0:14:1.53:11,0,2	0/0:3,0:3:2.75:0,3,26	0/0:3,0:3:5.92:0,6,53	1/1:6,0:6:5.87:36,6,0	1/1:7,0:7:11.93:91,12,0	1/1:15,0:13:7.05:107,7,0	0/1:35,0:34:36.20:321,0,36	1/1:17,0:17:0.63:5,1,0	1/1:13,1:13:23.82:205,24,0	1/1:15,3:18:28.71:229,29,0	1/1:3,0:3:0.47:1,0,0	0/1:3,0:3:11.06:11,0,28	1/1:12,0:12:2.78:20,3,0	0/0:4,0:3:3.32:0,3,28	1/1:17,1:18:11.92:92,12,0	0/1:19,0:16:16.31:142,0,16	1/1:19,0:18:46.92:383,47,0	1/1:11,0:8:13.53:85,14,0
chr10	47020284	.	AC	A	5085.57	PASS	AB=0.947;AC=53;AF=0.946;AN=56;BaseQRankSum=-4.111;DP=423;FS=15.602;HRun=1;HaplotypeScore=79.2998;InbreedingCoeff=0.3421;MQ=65.64;MQ0=3;MQRankSum=-2.341;QD=13.11;ReadPosRankSum=-0.224;VQSLOD=2.3601;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:22,1:22:55.37:410,55,0	1/1:8,0:8:11.83:77,12,0	0/0:35,0:16:22.18:0,22,212	0/1:34,2:22:17.89:18,0,265	1/1:24,2:26:57.45:450,57,0	1/1:15,0:14:5.83:38,6,0	1/1:6,0:5:14.95:119,15,0	1/1:22,0:19:38.13:322,38,0	1/1:5,0:5:9.05:46,9,0	1/1:1,24:25:50.87:444,51,0	1/1:13,1:14:17.91:162,18,0	1/1:2,0:2:2.03:5,2,0	1/1:3,0:3:6.71:32,7,0	1/1:5,1:6:5.92:39,6,0	1/1:7,0:7:11.70:73,12,0	1/1:14,2:14:41.95:360,42,0	1/1:30,5:34:83.38:696,83,0	1/1:18,0:18:16.23:146,16,0	1/1:14,0:13:24.68:179,25,0	1/1:17,1:18:37.80:281,38,0	1/1:3,0:3:2.97:20,3,0	1/1:3,0:3:6.03:28,6,0	1/1:1,11:12:2.97:20,3,0	1/1:4,0:3:4.51:23,5,0	1/1:18,0:18:11.90:85,12,0	1/1:19,0:16:47.75:413,48,0	1/1:18,1:18:50.83:413,51,0	1/1:10,1:8:23.89:185,24,0
chr10	47020412	.	CAAA	C	11511.89	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-3.579;DP=519;FS=6.417;HRun=11;HaplotypeScore=112.3259;InbreedingCoeff=0.8515;MQ=50.74;MQ0=16;MQRankSum=-2.162;QD=28.64;ReadPosRankSum=3.876;VQSLOD=3.8418;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:10,9:19:37.64:433,38,0	1/1:0,7:7:21.07:275,21,0	0/0:58,0:15:28.93:0,29,308	0/0:56,0:6:2.82:0,3,157	1/1:6,12:18:45.14:582,45,0	1/1:5,15:20:39.03:485,39,0	1/1:6,11:17:39.02:484,39,0	1/1:6,17:23:48.10:605,48,0	1/1:2,7:9:21.06:276,21,0	1/1:4,19:22:60.18:773,60,0	1/1:5,8:14:33.08:418,33,0	1/1:5,8:14:18.41:371,18,0	1/1:3,9:12:30.08:393,30,0	1/1:2,5:7:21.05:260,21,0	1/1:7,10:17:48.15:617,48,0	1/1:4,11:14:36.11:465,36,0	1/1:12,22:32:51.06:644,51,0	1/1:1,7:8:21.07:276,21,0	1/1:6,14:19:38.94:466,39,0	1/1:5,8:14:23.95:293,24,0	1/1:4,3:7:8.74:90,9,0	1/1:2,6:8:20.81:269,21,0	1/1:1,16:16:48.16:624,48,0	1/1:4,10:14:36.10:459,36,0	1/1:3,9:12:30.09:394,30,0	1/1:10,18:25:57.17:740,57,0	1/1:4,12:16:42.13:548,42,0	1/1:2,6:8:21.05:273,21,0
chr10	47020430	.	CACCA	C	5621.01	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-4.731;DP=567;FS=3.920;HRun=0;HaplotypeScore=160.5357;InbreedingCoeff=0.9318;MQ=50.41;MQ0=20;MQRankSum=-1.484;QD=23.72;ReadPosRankSum=0.083;VQSLOD=4.6100;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:21:37.15:0,37,512	0/0:9,0:10:14.98:0,15,206	0/0:63,0:16:1.61:0,2,103	0/0:50,0:9:6.02:0,6,96	1/1:6,11:17:30.10:482,30,0	1/1:10,8:17:15.05:241,15,0	1/1:9,7:16:21.07:337,21,0	1/1:14,7:22:27.08:410,27,0	0/0:5,0:10:15.05:0,15,259	1/1:11,19:29:54.18:836,54,0	1/1:7,10:17:30.10:482,30,0	0/0:6,0:13:36.11:0,36,580	0/0:10,0:15:27.09:0,27,408	1/1:2,9:11:15.05:241,15,0	0/0:20,0:28:67.78:0,68,977	1/1:4,16:18:33.10:507,33,0	1/1:18,9:25:36.10:548,36,0	1/1:7,2:9:9.03:144,9,0	0/0:25,0:24:46.29:0,46,638	0/0:16,0:17:44.57:0,45,502	0/0:11,0:11:16.29:0,16,246	0/0:3,0:9:21.07:0,21,360	0/0:9,0:19:48.16:0,48,759	0/0:10,0:19:24.08:0,24,421	1/1:3,11:14:27.09:433,27,0	1/1:13,16:25:51.16:768,51,0	0/0:13,0:15:44.81:0,45,519	1/1:4,3:7:12.04:192,12,0
chr10	47021040	.	AGGCAACTAGTGGT	A	4018.69	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.581;DP=726;FS=3.159;HRun=0;HaplotypeScore=262.0807;InbreedingCoeff=0.9996;MQ=90.62;MQ0=0;MQRankSum=-9.687;QD=85.50;ReadPosRankSum=3.388;VQSLOD=3.5377;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,132,8058	1/1:3,11:14:33.11:1300,33,0	0/0:32,0:33:91.19:0,91,4879	0/0:27,0:27:69.21:0,69,3056	0/0:26,0:26:75.24:0,75,3947	0/0:26,0:26:66.21:0,66,3761	0/0:23,0:23:66.23:0,66,4350	0/0:27,0:27:81.28:0,81,4575	0/0:24,0:24:66.23:0,66,4092	0/0:25,0:25:72.24:0,72,4157	0/0:18,0:18:51.18:0,51,3188	0/0:32,0:32:93.32:0,93,5978	0/0:28,0:28:84.29:0,84,5236	0/0:23,0:23:66.23:0,66,3882	1/1:4,29:33:69.24:2719,69,0	0/0:21,0:20:63.20:0,63,3966	0/0:24,0:24:69.21:0,69,4370	0/0:14,0:14:42.14:0,42,2624	0/0:20,0:20:54.19:0,54,2902	0/0:27,0:27:75.24:0,75,4108	0/0:30,0:30:90.30:0,90,5277	0/0:25,0:25:69.23:0,69,3925	0/0:17,0:17:51.16:0,51,2870	0/0:23,0:23:69.24:0,69,4187	0/0:35,0:34:99:0,102,6081	0/0:38,0:38:99:0,108,6263	0/0:31,0:31:90.31:0,90,5739	0/0:14,0:14:30.10:0,30,1859
chr10	47023730	.	ATCTCTCTCTCTCTCTCTCTC	A	666.45	PASS	AB=0.952;AC=9;AF=0.205;AN=44;BaseQRankSum=3.406;DP=596;FS=8.307;HRun=0;HaplotypeScore=269.6694;InbreedingCoeff=0.4842;MQ=67.57;MQ0=14;MQRankSum=-1.943;QD=6.80;ReadPosRankSum=-0.434;VQSLOD=1.2288;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:34:27.98:0,28,828	0/0:10,0:10:3.01:0,3,90	./.	./.	./.	0/0:20,0:20:18.06:0,18,619	0/0:22,0:22:21.07:0,21,819	0/0:33,0:32:4.37:0,4,15	0/0:19,0:19:12.02:0,12,263	1/1:27,0:27:3:28,3,0	./.	0/0:26,0:27:33.57:0,34,1192	0/0:12,0:11:6.02:0,6,187	1/1:10,0:12:3.01:63,3,0	0/0:14,0:14:12.04:0,12,223	1/1:15,4:19:9.03:475,9,0	0/1:19,1:20:54.58:65,0,55	0/0:19,0:19:3.02:0,3,7	0/0:22,0:22:12.09:0,12,292	0/0:16,0:16:6.02:0,6,182	0/0:22,0:22:17.65:0,18,673	0/0:18,0:17:6.02:0,6,219	./.	0/0:20,0:20:21.05:0,21,752	1/1:19,1:20:3.01:158,3,0	0/0:23,0:22:0.88:0,1,2	0/0:24,0:24:21.07:0,21,606	./.
chr10	47023907	.	CTT	C	10071.10	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-16.708;DP=685;FS=15.379;HRun=10;HaplotypeScore=110.0354;InbreedingCoeff=0.9772;MQ=83.01;MQ0=2;MQRankSum=-1.177;QD=26.57;ReadPosRankSum=2.094;VQSLOD=3.3800;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,37:43:96.25:1070,96,0	1/1:0,8:8:21.06:234,21,0	0/0:35,0:30:33.17:0,33,589	0/0:26,0:20:3.77:0,4,382	0/0:4,0:28:55.85:0,56,210	1/1:2,24:26:63.16:702,63,0	1/1:5,23:28:60.13:669,60,0	0/0:5,0:33:72.74:0,73,266	1/1:1,24:25:57.15:635,57,0	0/0:7,0:33:35.25:0,35,209	0/0:5,0:23:44.92:0,45,154	1/1:1,34:34:84.22:936,84,0	1/1:3,25:28:75.19:836,75,0	0/0:1,1:15:24.01:0,24,81	1/1:2,21:23:57.15:635,57,0	0/0:3,0:22:45.43:0,45,193	0/0:3,0:23:40.69:0,41,139	0/0:2,0:17:37.43:0,37,129	1/1:5,26:31:75.12:811,75,0	1/1:2,21:23:51.10:569,51,0	1/1:1,27:28:70.49:800,70,0	1/1:1,12:13:33.08:368,33,0	1/1:3,12:15:33.08:368,33,0	1/1:3,23:26:60.16:669,60,0	0/0:1,0:13:24.95:0,25,86	0/0:1,1:26:28.54:0,29,168	1/1:2,25:27:69.15:768,69,0	0/0:1,0:10:25.47:0,25,125
chr10	47025943	.	TA	T	2844.75	PASS	AB=0.938;AC=31;AF=0.554;AN=56;BaseQRankSum=12.275;DP=543;FS=5.125;HRun=13;HaplotypeScore=64.3533;InbreedingCoeff=0.8690;MQ=71.95;MQ0=0;MQRankSum=1.588;QD=10.23;ReadPosRankSum=4.088;VQSLOD=3.2096;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,18:21:53.68:394,54,0	1/1:0,9:9:20.87:153,21,0	0/1:14,1:13:22.08:22,0,31	0/0:5,0:5:0:0,0,0	0/0:23,0:23:54.09:0,54,525	1/1:4,18:23:49.75:356,50,0	1/1:2,11:14:34.82:247,35,0	0/0:38,0:40:86.79:0,87,806	1/1:5,13:18:34.86:261,35,0	0/0:27,1:28:32.17:0,32,470	0/0:21,3:24:13.27:0,13,448	1/1:8,9:17:26.79:197,27,0	1/1:8,10:18:26.75:197,27,0	0/0:16,0:16:33.04:0,33,315	1/1:4,11:15:32.80:241,33,0	0/0:22,1:23:32.09:0,32,458	0/0:21,0:21:45.07:0,45,438	0/0:9,1:10:2.13:0,2,182	1/1:5,0:20:28.31:94,28,0	1/1:3,1:28:43.29:139,43,0	1/1:3,0:19:26.47:76,26,0	1/1:4,11:15:28.83:203,29,0	1/1:2,10:13:28.88:203,29,0	1/1:1,9:10:23.86:175,24,0	0/0:19,0:21:38.18:0,38,393	0/0:33,1:34:65.22:0,65,791	1/1:4,1:23:31.48:104,31,0	0/0:18,1:20:19.99:0,20,342
chr10	47029412	.	ATTTTTC	A	4410.41	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=6.077;DP=605;FS=3.518;HRun=0;HaplotypeScore=136.8212;InbreedingCoeff=0.9554;MQ=66.57;MQ0=2;MQRankSum=-6.614;QD=29.80;ReadPosRankSum=-0.744;VQSLOD=4.3588;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:18,15:33:75.18:1439,75,0	0/0:14,0:14:39.13:0,39,1115	0/0:19,0:14:3.46:0,3,144	0/0:16,0:10:18.04:0,18,372	0/0:21,0:21:60.20:0,60,1679	1/1:5,12:17:42.13:847,42,0	1/1:9,5:14:39.13:714,39,0	0/0:29,0:29:66.21:0,66,1515	0/0:19,0:19:39.13:0,39,867	0/0:24,0:24:54.18:0,54,1382	0/0:21,0:21:42.14:0,42,1024	0/0:18,0:18:33.11:0,33,818	0/0:10,0:10:15.05:0,15,281	0/0:17,0:17:30.10:0,30,671	0/0:30,0:30:51.17:0,51,1465	0/0:25,0:25:48.14:0,48,1160	0/0:38,0:37:81.22:0,81,2001	0/0:11,0:10:15.05:0,15,336	1/1:12,7:19:24.08:487,24,0	1/1:7,8:15:18.06:321,18,0	1/1:4,11:15:15.05:288,15,0	0/0:23,0:23:62.94:0,63,1515	0/0:21,0:20:39.13:0,39,928	0/0:16,0:16:27.02:0,27,648	0/0:20,0:20:38.96:0,39,923	0/0:33,0:33:81.26:0,81,1915	1/1:7,28:35:14.45:315,14,0	0/0:32,0:32:87.28:0,87,2153
chr10	47029424	.	C	CT	1008.42	PASS	AB=0.987;AC=10;AF=0.179;AN=56;BaseQRankSum=9.230;DP=595;FS=2.918;HRun=5;HaplotypeScore=98.4943;InbreedingCoeff=0.5051;MQ=59.23;MQ0=8;MQRankSum=-5.622;QD=6.91;ReadPosRankSum=0.833;VQSLOD=-0.0283;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:27,6:33:9.11:351,9,0	0/0:14,0:14:42.11:0,42,451	0/0:17,0:9:5.15:0,5,86	0/0:17,0:8:17.99:0,18,173	0/0:26,0:26:60.07:0,60,645	1/1:17,0:17:23.74:106,24,0	1/1:12,2:14:31.18:326,31,0	0/0:32,0:32:82.78:0,83,853	0/0:17,0:15:39.06:0,39,407	0/0:24,0:24:59.81:0,60,621	0/0:22,0:21:41.99:0,42,435	0/0:15,0:15:36.09:0,36,386	0/0:10,0:10:15.04:0,15,161	0/0:17,0:17:30.07:0,30,321	0/0:30,0:30:44.68:0,45,562	0/0:21,0:21:51.11:0,51,539	0/0:35,0:33:83.19:0,83,835	0/0:10,0:9:15.04:0,15,161	0/1:17,1:18:99:150,0,130	0/1:14,0:14:93.13:146,0,93	0/1:15,0:15:39.78:82,0,40	0/0:22,0:22:62.90:0,63,656	0/0:20,0:19:45.10:0,45,475	0/0:13,0:13:27:0,27,268	0/0:23,0:23:52.77:0,53,531	0/0:33,0:33:90.22:0,90,957	0/1:35,0:33:1.06:1,0,62	0/0:30,0:30:87.22:0,87,931
chr10	47029435	.	TTC	T	810.88	PASS	AB=0.995;AC=15;AF=0.268;AN=56;BaseQRankSum=12.697;DP=576;FS=5.296;HRun=0;HaplotypeScore=102.0551;InbreedingCoeff=0.1513;MQ=53.42;MQ0=16;MQRankSum=-4.779;QD=3.94;ReadPosRankSum=4.344;VQSLOD=1.9958;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:33,2:34:51.39:330,51,0	0/0:14,0:14:30.61:0,31,377	0/1:15,0:6:10.15:10,0,38	0/0:15,0:6:7.83:0,8,83	0/0:29,0:29:35.27:0,35,303	1/1:18,0:18:34.04:145,34,0	1/1:13,1:14:30.20:185,30,0	0/0:35,0:33:34.06:0,34,550	0/1:17,0:15:12.18:12,0,118	0/0:24,0:24:63.73:0,64,468	0/0:19,0:18:12.38:0,12,162	0/1:16,0:16:16.21:16,0,92	0/1:7,0:7:8.49:8,0,60	0/0:19,0:19:20.46:0,20,132	0/0:22,0:22:61.28:0,61,556	0/0:18,0:18:42.24:0,42,285	0/0:34,0:31:68.22:0,68,447	0/0:10,0:8:6.40:0,6,83	0/1:20,0:18:99:137,0,162	0/1:17,0:16:61.01:61,0,197	0/1:16,0:15:40.22:40,0,62	0/0:18,0:18:24.02:0,24,242	0/1:19,1:19:24.76:25,0,135	0/1:11,0:11:12.84:13,0,32	0/0:21,0:21:37.06:0,37,291	0/0:32,0:31:67.26:0,67,520	0/0:35,0:33:0.54:0,1,141	0/0:25,0:25:58.77:0,59,404
chr10	47029437	.	CT	C	1795.60	PASS	AB=0.743;AC=37;AF=0.661;AN=56;BaseQRankSum=3.830;DP=573;FS=17.476;HRun=15;HaplotypeScore=90.5854;InbreedingCoeff=0.3772;MQ=53.11;MQ0=20;MQRankSum=1.320;QD=3.90;ReadPosRankSum=4.589;VQSLOD=-0.1096;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,1:34:37.17:117,37,0	0/0:12,1:15:3.93:0,4,205	0/0:15,0:6:3:0,3,26	0/0:14,0:6:0:0,0,0	1/1:10,14:29:11.50:181,11,0	1/1:1,0:18:24.44:70,24,0	1/1:5,0:11:14.04:40,14,0	0/1:21,12:33:4.03:141,0,4	1/1:6,0:14:12.17:35,12,0	0/1:9,12:22:15.40:144,0,15	1/1:10,7:18:22.58:134,23,0	1/1:7,0:16:14.21:41,14,0	1/1:3,0:7:2.02:6,2,0	1/1:6,13:19:13.83:83,14,0	0/1:19,4:23:13.11:13,0,226	0/1:8,9:18:0.67:115,0,1	0/1:16,17:31:15.97:191,0,16	0/1:9,1:10:8.10:8,0,17	0/1:18,1:18:5.45:5,0,129	0/0:14,0:15:26.32:0,26,184	0/0:15,0:14:8.95:0,9,69	1/1:10,0:18:12.09:35,12,0	1/1:8,1:19:14.93:54,15,0	1/1:4,2:11:16.85:75,17,0	1/1:8,10:20:24.49:146,24,0	1/1:17,13:29:31.32:194,31,0	0/0:36,0:34:20.54:0,21,229	1/1:13,7:24:25.68:138,26,0
chr10	47030690	.	CAAAA	C	9799.44	PASS	AB=0.587;AC=49;AF=0.875;AN=56;BaseQRankSum=-1.084;DP=590;FS=0.967;HRun=15;HaplotypeScore=116.4531;InbreedingCoeff=0.3416;MQ=59.67;MQ0=6;MQRankSum=0.569;QD=18.21;ReadPosRankSum=4.552;VQSLOD=3.1431;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,29:36:80.99:1064,81,0	1/1:1,0:7:7.45:19,7,0	0/0:26,0:14:15.89:0,16,186	0/0:22,0:11:6.02:0,6,105	1/1:3,22:28:58.17:738,58,0	0/1:3,3:30:30.68:144,0,31	1/1:9,0:21:7.26:137,7,0	1/1:8,14:21:35.97:489,36,0	1/1:3,1:15:12.95:66,13,0	1/1:1,18:19:51.15:677,51,0	1/1:2,23:25:53.99:718,54,0	1/1:4,0:19:12.24:32,12,0	1/1:4,3:18:0.10:124,0,0	1/1:2,10:12:30.09:408,30,0	0/1:4,0:17:9.38:17,0,9	1/1:3,23:25:53.91:736,54,0	1/1:2,19:21:42.08:555,42,0	0/1:4,4:8:5.18:111,0,5	1/1:2,13:14:36.08:489,36,0	1/1:3,15:22:40.21:495,40,0	1/1:6,8:16:16.10:207,16,0	1/1:4,0:22:0.58:25,1,0	1/1:7,0:32:28.61:95,29,0	1/1:3,0:24:16.15:42,16,0	1/1:1,21:22:57.16:777,57,0	1/1:4,25:27:67.41:901,67,0	1/1:5,19:22:51.07:694,51,0	1/1:0,3:3:3.01:41,3,0
chr10	47031151	.	G	GT	1024.85	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-0.119;DP=720;FS=5.147;HRun=6;HaplotypeScore=99.1033;InbreedingCoeff=0.9091;MQ=74.60;MQ0=12;MQRankSum=-1.575;QD=28.47;ReadPosRankSum=-1.378;VQSLOD=3.1508;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:57.12:0,57,581	1/1:1,5:6:18.06:226,18,0	0/0:67,0:33:59.63:0,60,549	0/0:64,0:27:3.10:0,3,193	0/0:26,0:26:72.15:0,72,727	0/0:22,0:21:49.09:0,49,472	0/0:20,0:20:45.08:0,45,451	0/0:30,0:30:80.96:0,81,799	0/0:16,0:16:36.07:0,36,360	0/0:33,0:33:83.20:0,83,826	0/0:23,0:23:63.14:0,63,641	0/0:20,0:20:42.06:0,42,412	0/0:23,0:23:47.89:0,48,488	0/0:10,0:10:30.07:0,30,306	1/1:10,20:30:77.44:919,77,0	0/0:19,0:19:53.84:0,54,525	0/0:34,0:34:96.14:0,96,959	0/0:23,0:23:57.09:0,57,570	0/0:24,0:24:54.04:0,54,521	0/0:24,0:24:42.03:0,42,415	0/0:10,0:10:18.02:0,18,172	0/0:30,0:30:75.16:0,75,764	0/0:30,0:29:47.82:0,48,481	0/0:14,0:14:26.90:0,27,275	0/0:22,0:22:57.10:0,57,572	0/0:32,0:32:53.99:0,54,790	0/0:25,0:25:41.94:0,42,409	0/0:16,0:13:39.09:0,39,397
chr10	47031180	.	G	GTT	3799.50	PASS	AB=0.908;AC=31;AF=0.554;AN=56;BaseQRankSum=5.035;DP=718;FS=0.398;HRun=15;HaplotypeScore=112.1457;InbreedingCoeff=0.6076;MQ=64.15;MQ0=15;MQRankSum=-1.498;QD=8.60;ReadPosRankSum=1.153;VQSLOD=1.9233;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:13,2:33:4.23:121,4,0	0/1:5,0:7:12.80:47,0,13	0/1:67,0:20:15.83:21,0,16	0/0:47,0:17:8.21:0,8,52	0/0:31,1:35:25.71:0,26,294	1/1:5,9:16:8.69:178,9,0	1/1:0,9:15:24.14:185,24,0	0/0:31,0:32:44.39:0,44,327	1/1:19,0:20:38.89:309,39,0	0/0:24,0:25:22.77:0,23,177	0/0:22,0:25:10:0,10,165	1/1:16,0:16:29.90:232,30,0	1/1:21,0:21:41.86:326,42,0	0/0:13,0:14:24.09:0,24,180	0/1:25,2:36:1.16:221,0,1	0/0:21,1:24:16.90:0,17,320	0/0:29,0:34:25.90:0,26,381	0/0:11,0:19:7.68:0,8,113	1/1:10,0:16:10.47:121,10,0	1/1:8,18:31:39.39:468,39,0	1/1:2,8:10:11.98:133,12,0	1/1:29,0:29:53.84:426,54,0	1/1:32,0:31:50.87:412,51,0	1/1:18,0:18:38.77:295,39,0	0/0:19,0:21:5.93:0,6,217	0/1:25,1:27:10.18:10,0,208	1/1:11,3:37:21.65:289,22,0	0/1:9,0:8:8.14:8,0,68
chr10	47031187	.	T	TTTG	4942.35	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=-8.856;DP=702;FS=0.000;HRun=0;HaplotypeScore=110.7925;InbreedingCoeff=0.7228;MQ=62.05;MQ0=13;MQRankSum=-0.431;QD=23.65;ReadPosRankSum=6.479;VQSLOD=4.4656;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:53.07:0,53,376	0/0:7,0:7:4.97:0,5,135	0/0:57,0:11:20.01:0,20,159	0/0:39,0:15:19.80:0,20,123	0/0:31,0:31:81.41:0,81,959	0/1:17,0:17:9.63:10,0,94	0/1:17,0:17:3.29:3,0,75	0/0:27,0:27:73.49:0,73,952	1/1:3,16:19:39.10:736,39,0	0/0:26,0:26:71.64:0,72,771	0/0:23,0:23:58.98:0,59,627	1/1:1,16:18:30.06:560,30,0	1/1:2,19:24:42.11:804,42,0	0/0:15,0:15:41.98:0,42,513	0/0:31,0:31:76.19:0,76,552	0/0:24,0:24:47.06:0,47,885	0/0:35,0:35:86.16:0,86,1075	0/0:18,0:18:38.87:0,39,416	0/0:17,0:17:12.94:0,13,239	0/1:31,0:31:84.25:84,0,164	0/0:10,0:10:7.54:0,8,26	1/1:3,26:29:59.78:1057,60,0	1/1:1,31:33:53.82:964,54,0	1/1:0,19:20:39.13:724,39,0	0/0:22,0:22:61.85:0,62,739	0/0:28,0:28:78.99:0,79,863	0/0:39,0:39:31.78:0,32,357	0/0:13,0:11:21.51:0,22,253
chr10	47031470	.	C	CTGTG	1871.25	PASS	AB=0.881;AC=21;AF=0.404;AN=52;BaseQRankSum=9.895;DP=478;FS=0.000;HRun=0;HaplotypeScore=128.3010;InbreedingCoeff=0.4532;MQ=50.39;MQ0=23;MQRankSum=1.561;QD=8.00;ReadPosRankSum=1.328;VQSLOD=2.8648;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:12,0:11:8.09:40,0,8	1/1:7,0:7:14.53:166,15,0	0/0:12,0:4:7.64:0,8,44	0/0:20,0:12:0.44:0,0,147	0/0:26,0:25:18.06:0,18,287	1/1:12,0:10:7.82:90,8,0	./.	0/0:25,0:22:57.66:0,58,792	1/1:21,1:18:4.42:88,4,0	0/0:21,0:20:48.85:0,49,681	0/0:10,0:9:8.90:0,9,168	0/1:22,0:21:39.08:215,0,39	0/1:10,12:23:32.35:119,0,32	0/0:16,0:16:3.47:0,3,229	1/1:23,0:23:6.48:80,6,0	0/0:16,0:16:21.36:0,21,379	0/0:7,0:6:11.95:0,12,104	0/0:9,0:8:18.95:0,19,283	0/1:10,1:13:99:211,0,142	./.	1/1:8,0:6:2.80:23,3,0	1/1:23,0:23:30:448,30,0	1/1:24,0:22:14.14:170,14,0	0/1:20,0:20:2.21:39,0,2	0/0:15,0:14:21.04:0,21,309	0/0:26,0:26:67.49:0,67,1003	1/1:22,0:20:4.96:359,5,0	0/0:20,0:14:34.60:0,35,467
chr10	47031474	.	C	CTGTGTGTGTGTG	4212.85	PASS	AB=1.000;AC=30;AF=0.536;AN=56;BaseQRankSum=6.020;DP=505;FS=3.607;HRun=0;HaplotypeScore=170.6481;InbreedingCoeff=0.6595;MQ=53.30;MQ0=21;MQRankSum=-0.845;QD=14.48;ReadPosRankSum=0.657;VQSLOD=3.7882;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:13:8.94:66,9,0	1/1:7,0:7:15.35:442,15,0	0/0:17,0:7:7.58:0,8,199	0/1:25,0:14:15.32:15,0,447	0/0:26,0:25:17.98:0,18,503	1/1:12,0:10:6.02:176,6,0	1/1:7,0:4:2.99:24,3,0	0/0:28,0:25:63.69:0,64,875	1/1:23,0:19:11.90:120,12,0	0/0:20,0:19:48.16:0,48,977	0/0:13,0:12:21:0,21,418	1/1:22,0:21:16.47:340,16,0	1/1:24,0:22:9.90:106,10,0	0/0:16,0:16:26.95:0,27,520	1/1:9,13:27:6.02:195,6,0	0/0:15,0:15:26.86:0,27,620	0/0:6,0:5:6.02:0,6,105	0/0:9,0:8:4.05:0,4,463	1/1:14,0:13:0.30:608,0,0	1/1:17,0:16:2.99:24,3,0	0/1:8,0:6:11.08:33,0,11	1/1:23,0:23:32.14:705,32,0	1/1:25,0:23:16.16:268,16,0	1/1:20,0:20:3.35:18,3,0	0/0:16,0:15:23.95:0,24,610	0/0:27,0:27:70.34:0,70,1414	1/1:23,0:21:38.40:1072,38,0	0/0:21,0:18:53.74:0,54,1162
chr10	47031476	.	C	CTGTGTGTGTG	6249.48	PASS	AB=0.992;AC=32;AF=0.571;AN=56;BaseQRankSum=-2.003;DP=571;FS=13.887;HRun=0;HaplotypeScore=185.8650;InbreedingCoeff=0.6037;MQ=51.56;MQ0=20;MQRankSum=-1.759;QD=16.58;ReadPosRankSum=-1.881;VQSLOD=2.7700;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:18:8.33:114,8,0	1/1:10,0:10:13.60:433,14,0	0/0:20,0:8:9.93:0,10,221	0/1:28,0:16:21.74:22,0,444	0/0:15,0:24:17.81:0,18,324	1/1:23,0:21:15.04:381,15,0	1/1:16,0:13:5.74:139,6,0	0/0:29,0:26:7.88:0,8,433	1/1:24,0:20:8.52:139,9,0	0/0:20,0:19:32.87:0,33,468	0/1:14,0:13:5.47:5,0,202	1/1:25,0:24:30.08:848,30,0	1/1:25,0:23:14.73:258,15,0	0/0:16,0:16:17.02:0,17,265	1/1:29,0:29:12.02:284,12,0	0/0:15,0:15:5.82:0,6,376	0/0:6,0:5:5.80:0,6,33	0/1:9,0:8:23.86:24,0,252	1/1:15,0:14:24.04:717,24,0	1/1:24,0:23:9:98,9,0	0/1:14,0:12:8.37:56,0,8	1/1:25,0:25:32.94:1180,33,0	1/1:26,0:24:17.84:480,18,0	1/1:9,11:23:1.85:12,2,0	0/0:16,0:15:23.63:0,24,385	0/0:27,0:27:53.84:0,54,735	1/1:27,0:25:40.55:1059,41,0	0/0:20,0:18:47.87:0,48,678
chr10	47031486	.	G	GTGTG	3225.28	PASS	AB=1.000;AC=48;AF=0.857;AN=56;BaseQRankSum=3.874;DP=593;FS=5.368;HRun=0;HaplotypeScore=147.0187;InbreedingCoeff=-0.0582;MQ=58.66;MQ0=14;MQRankSum=-1.087;QD=5.66;ReadPosRankSum=1.061;VQSLOD=2.4122;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:20:8.99:115,9,0	1/1:10,0:10:12.51:159,13,0	0/1:30,0:12:6.64:7,0,116	0/1:41,0:23:29.21:29,0,238	0/0:23,0:23:1.42:0,1,2	1/1:25,0:24:9:110,9,0	1/1:16,0:13:3.01:48,3,0	0/1:25,0:24:23.98:24,0,48	1/1:12,13:23:8.49:102,8,0	0/1:19,0:18:9.14:63,0,9	1/1:12,0:12:4.87:42,5,0	1/1:25,0:24:23.90:355,24,0	1/1:24,0:23:11.90:148,12,0	1/1:13,0:13:5.60:68,6,0	1/1:25,0:24:10.82:108,11,0	1/1:15,0:15:6.52:84,7,0	1/1:8,0:7:6.02:83,6,0	1/1:10,0:9:1.34:40,1,0	1/1:15,0:14:20.79:266,21,0	1/1:27,0:26:9:98,9,0	1/1:14,0:13:5.99:62,6,0	1/1:26,0:26:31.92:485,32,0	1/1:28,0:26:17.60:218,18,0	1/1:22,0:22:3.27:14,3,0	1/1:16,0:15:1.57:13,2,0	0/1:27,0:27:28.38:126,0,28	1/1:29,0:27:34.03:398,34,0	0/1:20,0:18:1.17:83,0,1
chr10	47031797	.	T	TCACACACACA	5907.84	PASS	AB=0.643;AC=40;AF=0.800;AN=50;BaseQRankSum=-5.196;DP=614;FS=7.124;HRun=0;HaplotypeScore=180.8615;InbreedingCoeff=0.2671;MQ=67.15;MQ0=13;MQRankSum=-0.726;QD=11.77;ReadPosRankSum=-1.006;VQSLOD=3.1623;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:36,0:55:16.40:16,0,447	0/0:4,0:9:15.04:0,15,307	./.	./.	1/1:22,0:21:18.06:441,18,0	1/1:30,0:28:18.24:643,18,0	1/1:21,0:21:12.03:238,12,0	1/1:26,0:26:27.05:428,27,0	0/1:9,0:16:15.57:68,0,16	1/1:24,0:24:30.06:502,30,0	1/1:11,1:12:6:171,6,0	1/1:5,0:19:8.28:71,8,0	0/1:2,0:14:6.26:6,0,37	1/1:6,9:17:6.02:297,6,0	0/0:9,0:26:35.88:0,36,661	0/1:7,0:21:7.86:73,0,8	1/1:27,2:29:30.95:799,31,0	1/1:10,0:10:6:96,6,0	1/1:20,0:19:24.52:440,25,0	./.	1/1:22,0:20:18.04:398,18,0	1/1:11,0:19:13.31:53,13,0	1/1:10,0:17:6.28:36,6,0	0/1:11,0:24:41.29:41,0,57	0/1:9,7:21:0:0,0,0	1/1:26,0:25:38.15:725,38,0	1/1:4,0:20:3.01:130,3,0	1/1:9,0:9:9.01:235,9,0
chr10	47032241	.	A	AT	5671.91	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-13.008;DP=547;FS=0.359;HRun=9;HaplotypeScore=53.5875;InbreedingCoeff=0.9946;MQ=79.65;MQ0=0;MQRankSum=1.257;QD=24.45;ReadPosRankSum=0.655;VQSLOD=5.4750;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:62.97:0,63,547	0/0:7,0:7:20.97:0,21,177	0/0:15,0:15:13.70:0,14,186	0/0:15,0:15:18.21:0,18,124	0/0:29,0:28:71.93:0,72,617	1/1:3,18:21:54.15:597,54,0	1/1:4,9:13:24.06:266,24,0	0/0:30,0:29:68.98:0,69,599	1/1:2,20:22:54.15:597,54,0	0/0:19,0:19:50.99:0,51,443	0/0:20,0:20:59.99:0,60,521	1/1:4,22:26:43.13:704,43,0	1/1:3,13:16:36.10:395,36,0	0/0:22,0:22:47.91:0,48,410	0/0:24,0:24:62.96:0,63,543	0/0:24,0:24:62.96:0,63,543	0/0:14,0:14:38.97:0,39,333	0/0:21,0:21:50.95:0,51,442	1/1:3,16:19:25.07:495,25,0	1/1:7,13:20:33.01:338,33,0	1/1:2,12:14:33.09:365,33,0	1/1:1,11:12:30.04:318,30,0	1/1:1,16:18:45.12:494,45,0	1/1:5,17:22:42.11:465,42,0	0/0:22,0:22:59.99:0,60,520	0/0:17,0:17:44.97:0,45,391	1/1:6,23:29:59.89:637,60,0	0/0:11,0:11:29.99:0,30,260
chr10	47032405	.	GA	G	3495.49	PASS	AB=0.670;AC=35;AF=0.625;AN=56;BaseQRankSum=-5.298;DP=491;FS=5.688;HRun=14;HaplotypeScore=64.2505;InbreedingCoeff=0.5429;MQ=62.14;MQ0=3;MQRankSum=0.521;QD=9.85;ReadPosRankSum=3.080;VQSLOD=3.1872;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:9,25:36:22.86:280,0,23	0/1:1,5:7:8.01:84,0,8	0/0:17,0:7:9.81:0,10,72	0/0:15,0:9:3:0,3,26	1/1:4,14:20:39.71:258,40,0	0/1:4,7:12:1.86:89,0,2	1/1:7,16:24:12.87:225,13,0	1/1:9,16:26:18.79:265,19,0	0/0:7,0:16:26.16:0,26,170	1/1:4,11:15:7.83:197,8,0	0/1:7,8:16:5.04:106,0,5	0/0:9,0:16:20.22:0,20,121	0/0:5,1:15:2.71:0,3,102	1/1:5,15:21:6.89:183,7,0	1/1:4,12:16:26.76:185,27,0	0/0:6,1:21:2.54:0,3,93	1/1:6,25:35:65.37:420,65,0	1/1:5,14:21:17.87:251,18,0	1/1:6,7:13:22.81:150,23,0	1/1:2,7:11:15.91:94,16,0	1/1:6,9:15:23.26:163,23,0	0/0:9,0:19:22.26:0,22,159	0/1:6,0:15:13.62:14,0,84	0/0:8,0:17:21.44:0,21,105	1/1:1,6:9:18.95:115,19,0	1/1:9,9:19:28.55:179,29,0	1/1:5,10:17:21.85:135,22,0	1/1:1,5:6:14.84:103,15,0
chr10	47034120	.	TTTTA	T	440.75	PASS	AC=18;AF=0.500;AN=36;BaseQRankSum=5.304;DP=226;FS=12.310;HRun=0;HaplotypeScore=38.7148;InbreedingCoeff=0.5998;MQ=71.89;MQ0=2;MQRankSum=-1.594;QD=8.64;ReadPosRankSum=-0.667;VQSLOD=0.4110;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:8:9.01:0,9,163	1/1:4,0:6:3:28,3,0	./.	./.	./.	./.	./.	0/0:32,0:31:0:0,0,0	1/1:2,2:4:3.01:46,3,0	0/0:10,0:10:9.03:0,9,196	0/0:4,0:4:6.02:0,6,139	1/1:2,4:6:12.04:183,12,0	1/1:3,3:6:6.02:91,6,0	0/0:2,0:2:3.01:0,3,44	1/1:1,0:2:3:28,3,0	1/1:3,2:5:6.02:91,6,0	0/0:34,0:34:36.12:0,36,802	0/0:15,0:15:18.01:0,18,324	1/1:10,0:11:3:28,3,0	./.	./.	./.	1/1:2,1:3:3.01:46,3,0	./.	0/0:14,0:14:15.05:0,15,330	./.	1/1:8,0:8:3.01:34,3,0	0/0:17,0:16:27.09:0,27,532
chr10	47034899	.	T	TC	4501.60	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-12.449;DP=667;FS=8.192;HRun=1;HaplotypeScore=60.6151;InbreedingCoeff=0.9997;MQ=70.94;MQ0=0;MQRankSum=-1.131;QD=42.87;ReadPosRankSum=2.193;VQSLOD=4.8472;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,103,1508	1/1:0,18:18:51.17:814,51,0	0/0:19,0:19:54.18:0,54,744	0/0:20,0:20:32.99:0,33,584	0/0:25,0:25:72.23:0,72,989	1/1:1,28:29:72.25:1150,72,0	1/1:0,25:25:69.24:1099,69,0	0/0:28,0:28:81.25:0,81,1085	0/0:26,0:26:78.26:0,78,1086	0/0:29,0:29:84.25:0,84,1111	0/0:22,0:22:66.20:0,66,889	0/0:20,0:20:60.17:0,60,805	0/0:14,0:14:39.12:0,39,523	0/0:18,0:18:54.18:0,54,755	1/1:0,33:33:90.31:1438,90,0	0/0:26,0:26:78.24:0,78,1058	0/0:38,0:38:99:0,108,1491	0/0:23,0:23:63.19:0,63,860	0/0:29,0:28:84.24:0,84,1100	0/0:23,0:23:68.58:0,69,915	0/0:10,0:10:30.08:0,30,401	0/0:21,0:21:63.16:0,63,827	0/0:29,0:29:87.25:0,87,1177	0/0:15,0:15:42.14:0,42,587	0/0:20,0:20:60.19:0,60,821	0/0:27,0:27:78.25:0,78,1060	0/0:28,0:28:81.27:0,81,1132	0/0:14,0:13:42.14:0,42,587
chr10	47037353	.	AACACAC	A	1110.44	PASS	AB=0.861;AC=28;AF=0.583;AN=48;BaseQRankSum=-2.199;DP=534;FS=1.623;HRun=0;HaplotypeScore=106.8815;InbreedingCoeff=0.4618;MQ=67.43;MQ0=16;MQRankSum=-1.834;QD=3.84;ReadPosRankSum=1.211;VQSLOD=2.0894;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:22:8.65:134,9,0	1/1:6,0:6:2.22:7,2,0	./.	./.	0/0:15,0:18:12.02:0,12,137	1/1:16,0:16:3:28,3,0	0/0:25,0:26:6.47:0,6,63	./.	0/1:18,3:20:24.46:123,0,24	0/0:17,0:19:8.18:0,8,112	0/1:12,0:14:10.49:10,0,177	1/1:14,9:20:8.44:132,8,0	1/1:16,3:17:4.32:97,4,0	0/0:16,0:15:6.01:0,6,75	1/1:19,0:18:3.01:42,3,0	1/1:22,0:22:11.87:142,12,0	0/0:15,0:20:9.03:0,9,115	0/0:13,0:18:6.49:0,6,74	./.	1/1:13,0:13:3.01:40,3,0	1/1:31,0:30:11.77:129,12,0	1/1:10,11:20:3.01:61,3,0	1/1:13,5:18:5.98:80,6,0	1/1:26,0:23:11.77:150,12,0	0/0:10,0:14:2.14:0,2,37	0/0:18,0:21:11.70:0,12,117	1/1:12,4:12:5.97:96,6,0	0/0:3,0:3:2.13:0,2,38
chr10	47038872	.	C	CT	337.79	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=0.424;DP=333;FS=0.000;HRun=10;HaplotypeScore=39.2888;InbreedingCoeff=0.5932;MQ=61.73;MQ0=13;MQRankSum=-0.834;QD=16.89;ReadPosRankSum=0.877;VQSLOD=3.4448;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:17:44.83:0,45,357	0/0:6,0:6:14.98:0,15,123	0/0:10,0:6:0.48:0,0,22	0/0:10,0:8:5.41:0,5,63	0/0:15,0:15:38.94:0,39,320	1/1:2,11:13:18.62:352,19,0	1/1:2,5:6:9.02:96,9,0	0/0:44,0:40:83.75:0,84,672	0/0:4,0:3:5.99:0,6,49	0/0:17,0:17:35.94:0,36,294	0/0:13,0:13:29.95:0,30,244	0/0:5,0:5:11.95:0,12,94	0/0:4,0:4:11.98:0,12,98	0/0:14,0:14:38.94:0,39,318	0/0:14,0:14:35.94:0,36,293	0/0:4,0:4:11.99:0,12,99	0/0:30,0:29:58.93:0,59,474	0/0:15,0:15:32.76:0,33,259	0/0:17,0:15:41.95:0,42,345	0/0:5,0:5:5.97:0,6,47	0/0:3,0:3:3:0,3,25	0/0:4,0:4:5.98:0,6,49	0/0:9,0:9:23.86:0,24,194	0/0:4,0:4:11.82:0,12,84	0/0:17,0:16:26.92:0,27,222	0/0:13,0:13:38.90:0,39,314	0/0:9,0:9:26.97:0,27,221	0/0:3,0:3:8.99:0,9,73
chr10	47039968	.	AAC	A	340.05	PASS	AB=0.934;AC=25;AF=0.568;AN=44;BaseQRankSum=2.580;DP=435;FS=4.501;HRun=0;HaplotypeScore=77.4245;InbreedingCoeff=-0.1240;MQ=75.01;MQ0=7;MQRankSum=1.700;QD=1.28;ReadPosRankSum=2.635;VQSLOD=1.0219;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/0:2,1:3:3:0,3,26	./.	./.	1/1:27,0:26:7.15:35,7,0	0/1:16,1:17:17.22:17,0,109	0/1:20,0:20:14.34:14,0,63	0/0:18,0:16:0.89:0,1,2	0/1:12,2:14:14.56:15,0,143	1/1:16,0:16:2.80:13,3,0	1/1:7,0:8:1.96:23,2,0	0/0:15,0:16:1.94:0,2,144	0/1:10,2:12:68.66:69,0,69	1/1:5,0:5:7.76:47,8,0	1/1:12,0:11:2.99:26,3,0	0/1:16,7:23:2.68:26,0,3	1/1:9,0:10:2.94:18,3,0	./.	0/1:13,0:12:14.92:17,0,15	0/0:16,0:15:0.15:0,0,21	1/1:23,0:21:1.78:55,2,0	0/1:14,0:14:1.48:1,0,38	0/1:10,0:10:13.49:13,0,56	0/1:22,1:22:16.98:17,0,80	./.	1/1:18,0:18:9.31:57,9,0	0/0:20,0:20:2.35:0,2,31	./.
chr10	47040018	.	C	CAG	602.15	PASS	AB=0.976;AC=19;AF=0.352;AN=54;BaseQRankSum=8.097;DP=516;FS=1.406;HRun=0;HaplotypeScore=99.8300;InbreedingCoeff=0.2934;MQ=49.68;MQ0=33;MQRankSum=1.651;QD=2.75;ReadPosRankSum=0.048;VQSLOD=2.1216;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:16:14.97:122,15,0	1/1:6,0:6:4.52:62,5,0	0/0:14,0:9:21.03:0,21,239	0/0:28,0:7:8.13:0,8,112	1/1:18,0:17:4.79:27,5,0	0/0:23,0:23:54.86:0,55,515	0/0:29,1:26:59.83:0,60,548	0/0:18,0:15:27.60:0,28,160	0/0:22,0:22:44.98:0,45,443	0/1:11,0:9:18.76:19,0,35	1/1:13,0:12:1.77:26,2,0	0/0:23,0:22:36.92:0,37,491	0/0:24,0:22:57.19:0,57,492	0/1:9,0:8:8.29:13,0,8	1/1:5,16:20:3.01:33,3,0	0/0:28,0:28:42.09:0,42,342	0/0:5,0:5:4.18:0,4,13	0/0:3,0:1:0.89:0,1,2	0/1:13,1:13:31.43:194,0,31	0/1:22,1:22:1.41:46,0,1	0/1:25,0:19:48.45:96,0,48	0/0:23,0:20:29.94:0,30,263	0/0:22,0:22:22.44:0,22,310	0/0:31,0:30:65.45:0,65,522	1/1:15,0:13:3:25,3,0	0/1:14,0:11:33.76:34,0,48	0/1:30,2:31:30.84:69,0,31	./.
chr10	47040020	.	C	CAGAG	2390.11	PASS	AB=1.000;AC=32;AF=0.571;AN=56;BaseQRankSum=10.134;DP=573;FS=14.959;HRun=0;HaplotypeScore=140.3521;InbreedingCoeff=0.6330;MQ=49.53;MQ0=34;MQRankSum=-3.414;QD=7.91;ReadPosRankSum=-2.809;VQSLOD=1.5304;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:18:15.02:243,15,0	1/1:6,0:6:13.58:160,14,0	0/0:17,0:11:27.04:0,27,434	0/0:29,0:7:2.76:0,3,182	1/1:25,0:24:9.59:81,10,0	0/0:22,0:22:44.57:0,45,786	0/0:29,0:25:36.83:0,37,890	1/1:26,0:22:2.60:242,3,0	0/0:22,0:22:44.07:0,44,678	0/1:14,0:12:28.47:162,0,28	1/1:16,0:15:4.90:71,5,0	0/0:23,0:22:46.73:0,47,850	0/0:25,0:23:24.84:0,25,772	1/1:14,0:13:10.78:83,11,0	1/1:21,0:20:2.84:14,3,0	0/0:27,0:27:50.41:0,50,708	0/1:8,0:8:3.77:49,0,4	1/1:8,0:5:11.84:142,12,0	1/1:14,0:13:30.07:426,30,0	1/1:6,16:23:4.14:48,4,0	1/1:26,0:20:1.15:285,1,0	0/0:24,0:21:26.07:0,26,464	0/0:21,0:21:13.61:0,14,476	0/0:31,0:30:65.35:0,65,920	1/1:19,0:17:6.01:75,6,0	1/1:23,0:20:10.19:395,10,0	1/1:8,25:33:0.97:72,1,0	1/1:4,0:3:3.01:38,3,0
chr10	47040026	.	GACAGAGACAGAGACAC	G	593.28	PASS	AB=0.907;AC=9;AF=0.161;AN=56;BaseQRankSum=4.372;DP=592;FS=50.556;HRun=0;HaplotypeScore=206.0105;InbreedingCoeff=-0.0294;MQ=50.63;MQ0=32;MQRankSum=-3.072;QD=3.73;ReadPosRankSum=-4.727;VQSLOD=-0.6325;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:21:24.08:0,24,1477	0/0:6,0:6:15.05:0,15,723	0/0:26,0:14:37.01:0,37,1988	0/0:34,0:10:22.32:0,22,1127	0/1:14,12:25:12.94:13,0,387	0/0:22,0:22:59.53:0,60,2947	0/0:27,0:24:59.86:0,60,3073	0/1:26,0:22:99:215,0,1235	0/0:23,0:23:54.12:0,54,2763	0/1:7,7:13:90.12:90,0,799	0/0:17,0:16:4.44:0,4,251	0/0:23,0:22:52.03:0,52,3258	0/0:25,0:23:54.59:0,55,3004	0/1:14,0:13:99:113,0,133	1/1:21,0:20:3.07:11,3,0	0/0:25,0:25:38.21:0,38,3026	0/1:8,0:8:30.91:31,0,74	0/0:9,0:6:15.05:0,15,562	0/0:19,0:17:23.01:0,23,1710	0/0:24,0:23:21.97:0,22,701	0/1:27,0:21:9.66:10,0,1481	0/0:21,0:18:35.18:0,35,2063	0/0:18,0:18:29.09:0,29,1579	0/0:29,0:28:60.19:0,60,3529	0/0:20,0:18:9.50:0,10,395	0/1:23,0:21:99:244,0,1549	0/0:36,0:35:10.95:0,11,598	0/0:5,0:4:6.02:0,6,232
chr10	47040729	.	TG	T	1895.15	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=1.544;DP=516;FS=3.824;HRun=10;HaplotypeScore=68.3568;InbreedingCoeff=0.7543;MQ=70.18;MQ0=0;MQRankSum=-2.453;QD=14.92;ReadPosRankSum=3.619;VQSLOD=4.1772;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:38:12.25:0,12,389	1/1:7,14:21:22.65:364,23,0	0/0:13,0:13:16.52:0,17,172	0/1:17,0:15:8.47:8,0,151	0/0:21,0:24:11.81:0,12,87	0/0:14,0:19:8.99:0,9,43	0/0:14,0:20:6.21:0,6,30	0/0:13,0:13:8.86:0,9,60	0/0:18,0:18:48.12:0,48,523	0/0:15,0:21:11.77:0,12,77	0/0:13,0:13:8.97:0,9,79	0/0:22,0:22:42.09:0,42,448	0/0:15,0:15:36.03:0,36,363	0/0:15,0:15:17.53:0,18,105	1/1:2,15:17:47.99:417,48,0	0/0:32,1:33:37.09:0,37,621	0/0:9,0:20:23.08:0,23,131	0/0:6,0:6:2.88:0,3,15	1/1:5,10:15:32.99:286,33,0	1/1:5,14:19:38.98:338,39,0	1/1:9,16:25:47.85:405,48,0	0/0:17,0:17:15.04:0,15,166	0/0:16,1:20:9.66:0,10,313	0/0:21,0:21:42.07:0,42,445	0/0:10,0:18:5.68:0,6,28	0/0:17,0:18:17.73:0,18,119	1/1:3,10:13:29.99:260,30,0	0/0:5,0:5:2.97:0,3,20
chr10	47042302	.	C	CATACATAC	16895.86	PASS	AC=50;AF=0.962;AN=52;BaseQRankSum=-3.196;DP=873;FS=2.096;HRun=0;HaplotypeScore=197.8660;InbreedingCoeff=0.5286;MQ=52.90;MQ0=3;MQRankSum=-0.898;QD=21.69;ReadPosRankSum=3.262;VQSLOD=4.4303;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:35,0:35:8.59:316,9,0	1/1:18,0:18:15.05:521,15,0	./.	0/0:38,0:30:6:0,6,86	1/1:29,0:29:15.05:576,15,0	1/1:26,0:26:12.04:458,12,0	1/1:34,0:34:5.35:72,5,0	1/1:47,0:47:32.83:305,33,0	1/1:35,0:35:33.11:1303,33,0	1/1:42,0:42:65.76:1819,66,0	1/1:24,0:24:17.42:585,17,0	1/1:35,0:35:36.12:1456,36,0	1/1:34,0:34:12.04:488,12,0	1/1:20,0:20:16.70:680,17,0	1/1:52,0:51:6.02:208,6,0	1/1:42,0:42:33.11:1346,33,0	1/1:16,0:16:21.07:828,21,0	1/1:15,4:20:17.95:325,18,0	1/1:22,0:20:21.80:200,22,0	1/1:30,0:30:10.58:145,11,0	1/1:31,0:31:17.98:205,18,0	1/1:36,0:36:18.06:734,18,0	1/1:24,0:23:32.99:1246,33,0	./.	1/1:33,0:33:27.08:971,27,0	1/1:38,0:38:50.74:1705,51,0	1/1:44,0:44:8.93:258,9,0	1/1:12,0:12:12.01:144,12,0
chr10	47043139	.	GAACA	G	3000.50	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=9.639;DP=544;FS=33.749;HRun=0;HaplotypeScore=93.4746;InbreedingCoeff=0.9074;MQ=67.90;MQ0=1;MQRankSum=2.379;QD=25.00;ReadPosRankSum=2.542;VQSLOD=1.4491;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,107,2311	0/0:6,0:6:14.54:0,15,256	0/0:25,0:20:26.97:0,27,612	0/0:14,0:14:15.05:0,15,295	0/0:12,0:12:26.45:0,26,548	0/0:7,0:22:33.11:0,33,574	0/0:9,0:25:27.06:0,27,393	0/0:21,0:21:42.12:0,42,792	1/1:3,12:15:27.09:445,27,0	0/0:22,0:22:57.19:0,57,1234	0/1:14,0:13:10.17:10,0,506	1/1:2,11:13:21.07:346,21,0	1/1:3,8:11:21.07:346,21,0	0/0:11,0:11:30.10:0,30,714	0/0:26,0:26:63.20:0,63,1401	1/1:3,14:17:33.11:544,33,0	0/0:39,0:39:99:0,105,2314	0/0:23,0:23:54.14:0,54,1187	0/0:17,0:17:30.10:0,30,727	0/0:24,0:24:69.20:0,69,1487	0/0:34,0:35:93.17:0,93,2098	1/1:4,15:19:43.30:620,43,0	1/1:3,10:13:23.81:343,24,0	1/1:3,15:18:33.11:544,33,0	0/0:13,0:13:30.02:0,30,588	0/0:14,0:14:30.09:0,30,665	0/0:18,0:18:48.16:0,48,1126	0/0:9,0:9:22.51:0,23,374
chr10	47043238	.	AT	A	3153.95	PASS	AC=20;AF=0.370;AN=54;BaseQRankSum=4.756;DP=363;FS=0.475;HRun=8;HaplotypeScore=38.7086;InbreedingCoeff=0.8730;MQ=75.32;MQ0=10;MQRankSum=-0.072;QD=19.59;ReadPosRankSum=0.989;VQSLOD=2.9778;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:27:64.96:0,65,736	0/0:2,0:2:6.02:0,6,72	0/0:24,0:11:21.12:0,21,160	0/0:35,0:12:11.37:0,11,87	1/1:0,9:9:24.03:230,24,0	0/0:16,0:16:39.12:0,39,471	0/0:6,0:6:9.03:0,9,109	1/1:8,34:41:99:978,102,0	0/0:6,0:6:15.05:0,15,181	1/1:1,10:11:12.46:264,12,0	1/1:1,9:10:24.03:230,24,0	0/0:4,0:4:9.03:0,9,109	0/0:6,0:6:15.05:0,15,181	1/1:0,4:4:9.01:87,9,0	0/0:7,0:7:15.05:0,15,181	0/0:14,0:14:33.10:0,33,398	1/1:2,22:23:48.08:464,48,0	1/1:5,19:24:29.81:442,30,0	0/0:27,0:27:66.19:0,66,786	0/0:5,0:5:6.02:0,6,72	0/0:3,0:3:6.02:0,6,72	./.	0/0:3,0:3:9.03:0,9,104	0/0:2,0:2:3.01:0,3,36	1/1:2,11:13:21.03:203,21,0	1/1:4,6:10:18.03:174,18,0	0/0:12,0:12:24.06:0,24,279	1/1:1,13:14:30.05:290,30,0
chr10	47043259	.	A	AT	734.16	PASS	AB=0.690;AC=5;AF=0.089;AN=56;BaseQRankSum=-5.728;DP=337;FS=2.666;HRun=7;HaplotypeScore=45.5833;InbreedingCoeff=0.1837;MQ=66.53;MQ0=12;MQRankSum=0.732;QD=17.91;ReadPosRankSum=0.328;VQSLOD=3.1609;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:25:72.09:0,72,687	0/0:5,0:5:15.02:0,15,144	0/0:19,0:6:4.37:0,4,71	0/0:33,0:11:0.93:0,1,73	0/0:8,0:8:21.02:0,21,197	0/0:15,0:15:39.06:0,39,377	0/0:4,0:4:9.01:0,9,86	0/0:37,0:36:84.05:0,84,792	0/0:5,0:5:12:0,12,110	0/0:11,0:11:33.05:0,33,319	0/0:8,0:8:24.03:0,24,226	0/0:3,0:3:6:0,6,58	0/0:3,0:3:9.01:0,9,87	0/0:4,0:4:9.01:0,9,87	0/0:8,0:8:21.02:0,21,197	0/0:7,0:7:15.02:0,15,145	0/0:28,0:27:57.08:0,57,550	0/0:25,0:25:63.09:0,63,608	1/1:4,18:21:48.14:571,48,0	0/1:4,1:5:24.22:24,0,75	0/1:2,6:8:10.92:163,0,11	0/0:1,0:1:3:0,3,29	0/0:2,0:2:3:0,3,29	0/0:1,0:1:3:0,3,29	0/0:9,0:9:24.04:0,24,232	0/0:11,0:11:30.05:0,30,290	0/1:3,3:6:16.94:97,0,17	0/0:19,0:19:46.20:0,46,440
chr10	47043757	.	CT	C	12814.94	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=17.343;DP=651;FS=10.560;HRun=4;HaplotypeScore=102.5737;InbreedingCoeff=0.9985;MQ=85.53;MQ0=0;MQRankSum=-4.173;QD=30.51;ReadPosRankSum=1.651;VQSLOD=4.2247;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,32:32:84.25:980,84,0	1/1:2,6:8:21.05:236,21,0	0/0:20,0:20:41.20:0,41,521	0/0:24,0:24:65.95:0,66,751	1/1:24,0:24:54.16:627,54,0	1/1:2,16:18:48.14:560,48,0	1/1:2,29:31:84.25:979,84,0	1/1:4,26:30:78.16:884,78,0	0/0:24,0:24:69.23:0,69,965	1/1:2,13:15:41.71:465,42,0	1/1:0,18:18:51.15:595,51,0	0/0:32,0:32:90.29:0,90,1242	0/0:20,0:20:57.14:0,57,731	1/1:1,17:18:51.15:595,51,0	1/1:3,25:28:75.22:875,75,0	0/0:26,0:26:78.23:0,78,1045	1/1:0,21:21:60.18:700,60,0	1/1:1,25:26:63.19:735,63,0	1/1:0,19:19:54.16:630,54,0	1/1:1,12:13:27.08:315,27,0	1/1:3,50:53:99:1609,138,0	0/0:25,0:25:75.16:0,75,963	0/0:14,0:14:42.14:0,42,588	0/0:46,0:46:99:0,135,1865	1/1:0,21:21:54.16:630,54,0	1/1:0,20:20:60.14:667,60,0	1/1:2,16:18:42.12:490,42,0	1/1:0,7:7:21.06:245,21,0
chr10	47043761	.	TA	T	12815.18	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=17.843;DP=655;FS=15.474;HRun=1;HaplotypeScore=106.0658;InbreedingCoeff=0.9985;MQ=85.93;MQ0=0;MQRankSum=-5.147;QD=30.44;ReadPosRankSum=2.518;VQSLOD=3.3685;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:33,0:33:84.25:980,84,0	1/1:8,0:8:21.05:236,21,0	0/0:20,0:20:38.15:0,38,663	0/0:25,0:25:68.92:0,69,919	1/1:0,25:25:54.16:627,54,0	1/1:16,0:16:48.14:560,48,0	1/1:30,0:30:84.25:979,84,0	1/1:28,0:28:78.17:884,78,0	0/0:25,0:25:75.19:0,75,1145	1/1:14,0:14:41.71:465,42,0	1/1:20,0:20:51.15:595,51,0	0/0:32,0:32:93.29:0,93,1426	0/0:17,0:17:51.17:0,51,807	1/1:19,0:19:51.15:595,51,0	1/1:26,0:26:75.22:875,75,0	0/0:29,0:29:87.26:0,87,1309	1/1:22,0:22:60.18:700,60,0	1/1:25,0:25:63.19:735,63,0	1/1:20,0:20:54.16:630,54,0	1/1:13,0:13:27.08:315,27,0	1/1:55,0:55:99:1609,138,0	0/0:25,0:25:72.25:0,72,1142	0/0:14,0:14:42.14:0,42,656	0/0:47,0:47:99:0,141,2200	1/1:21,0:21:54.16:630,54,0	1/1:22,0:22:60.14:667,60,0	1/1:17,0:17:42.12:490,42,0	1/1:7,0:7:21.06:245,21,0
chr10	47044281	.	GCCCTT	G	14698.27	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=18.515;DP=775;FS=20.385;HRun=0;HaplotypeScore=151.8342;InbreedingCoeff=0.9964;MQ=87.11;MQ0=0;MQRankSum=-8.674;QD=56.97;ReadPosRankSum=2.618;VQSLOD=4.1553;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,132,4391	0/0:6,0:6:18.06:0,18,592	0/0:28,0:28:84.27:0,84,2578	0/0:31,0:31:87.77:0,88,2493	1/1:0,32:32:72.20:1626,72,0	0/0:21,0:21:63.20:0,63,1907	0/0:33,0:33:99:0,99,3216	1/1:0,29:29:87.28:1889,87,0	0/0:30,0:30:90.29:0,90,2891	1/1:0,33:33:99:2171,99,0	1/1:2,18:20:36.12:832,36,0	0/0:26,0:26:78.27:0,78,2552	0/0:24,0:24:72.25:0,72,2387	1/1:0,23:23:63.22:1432,63,0	0/0:42,0:42:99:0,126,4128	0/0:37,0:37:99:0,111,3699	1/1:0,42:42:99:2302,99,0	1/1:0,16:16:45.15:1048,45,0	0/0:22,0:22:66.18:0,66,1943	0/0:27,0:27:81.28:0,81,2629	0/0:38,0:38:99:0,114,3783	0/0:28,0:28:84.29:0,84,2704	0/0:26,0:26:78.27:0,78,2590	0/0:32,0:32:96.29:0,96,2945	1/1:0,29:29:66.14:1443,66,0	1/1:0,23:23:69.24:1606,69,0	0/0:22,0:22:63.22:0,63,2068	1/1:0,11:11:15.05:350,15,0
chr10	47045153	.	ATCCC	A	1536.02	PASS	AB=1.000;AC=8;AF=0.143;AN=56;BaseQRankSum=11.219;DP=700;FS=14.493;HRun=0;HaplotypeScore=118.2978;InbreedingCoeff=0.6290;MQ=55.62;MQ0=9;MQRankSum=-6.785;QD=11.91;ReadPosRankSum=2.729;VQSLOD=2.5474;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,105,2151	0/0:12,0:12:33.11:0,33,780	0/0:22,0:7:5.88:0,6,76	0/0:34,0:19:29.13:0,29,393	0/0:22,0:22:57.09:0,57,1020	1/1:3,23:26:42.14:729,42,0	1/1:5,20:25:30.10:517,30,0	0/0:39,0:37:65.75:0,66,887	0/0:30,0:30:82.73:0,83,1507	0/0:28,0:28:78.17:0,78,1439	0/0:15,0:15:42.13:0,42,915	0/0:30,0:30:87.19:0,87,1872	0/0:30,0:30:11.93:0,12,1384	0/0:18,0:18:51.11:0,51,1046	0/0:30,0:29:72.15:0,72,1490	0/0:33,0:33:78.15:0,78,1558	0/0:35,0:35:90.12:0,90,1724	0/0:16,0:16:27.08:0,27,619	1/1:23,0:20:5.35:168,5,0	0/1:20,0:20:31.51:32,0,169	0/0:44,0:44:11.56:0,12,189	0/0:8,0:8:24.05:0,24,453	0/0:16,0:16:42.10:0,42,891	0/0:28,0:28:69.08:0,69,1322	0/0:9,0:9:24.08:0,24,569	0/0:24,0:24:60.12:0,60,1257	0/1:35,0:35:99:238,0,134	0/0:10,0:10:20.99:0,21,308
chr10	47045161	.	CTCCCTCCT	C	1744.81	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=8.282;DP=683;FS=6.838;HRun=0;HaplotypeScore=164.5245;InbreedingCoeff=0.9117;MQ=55.85;MQ0=9;MQRankSum=-5.526;QD=14.91;ReadPosRankSum=0.852;VQSLOD=1.8599;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,106,3190	0/0:12,0:12:33.11:0,33,1186	0/0:22,0:9:20.08:0,20,314	0/0:31,0:18:17.79:0,18,383	0/0:22,0:22:51.16:0,51,1674	0/0:25,0:25:44.68:0,45,326	0/0:23,0:24:26.84:0,27,134	0/0:36,0:34:51.99:0,52,864	0/0:34,0:34:83.90:0,84,2332	0/0:28,0:28:72.17:0,72,2061	0/0:16,0:16:45.15:0,45,1414	0/0:30,0:30:87.27:0,87,2975	0/0:31,0:31:81.24:0,81,2530	0/0:17,0:17:45.11:0,45,1539	0/0:27,0:26:69.20:0,69,2026	0/0:30,0:30:84.24:0,84,2482	0/0:33,0:33:84.21:0,84,2413	0/0:14,0:14:30.02:0,30,922	1/1:7,11:15:33.01:604,33,0	1/1:6,13:20:17.56:212,18,0	1/1:13,29:42:2.85:57,3,0	0/0:9,0:9:21.06:0,21,720	0/0:16,0:16:39.09:0,39,1141	0/0:24,0:24:63.18:0,63,2009	0/0:11,0:11:30.07:0,30,803	0/0:22,0:21:54.14:0,54,1832	1/1:8,29:36:38.31:1022,38,0	0/0:10,0:10:6.02:0,6,241
chr10	47046429	.	GT	G	6952.48	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=18.658;DP=755;FS=0.304;HRun=5;HaplotypeScore=90.4088;InbreedingCoeff=0.9996;MQ=71.01;MQ0=0;MQRankSum=-7.346;QD=33.75;ReadPosRankSum=2.068;VQSLOD=4.9370;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,39:40:99:1450,117,0	1/1:0,21:21:57.18:706,57,0	0/0:33,0:33:96.22:0,96,1274	0/0:18,0:18:36.16:0,36,605	0/0:26,0:26:78.25:0,78,1102	0/0:26,0:26:78.26:0,78,1120	0/0:27,0:27:78.25:0,78,1103	0/0:52,0:52:99:0,150,2117	0/0:21,0:21:57.19:0,57,819	0/0:29,0:29:81.27:0,81,1162	0/0:14,0:14:42.14:0,42,604	0/0:19,0:19:57.19:0,57,817	0/0:18,0:18:45.11:0,45,591	0/0:25,0:25:66.22:0,66,949	1/1:1,24:25:66.21:818,66,0	0/0:33,0:33:99:0,99,1384	0/0:41,0:41:99:0,117,1657	0/0:21,0:21:63.15:0,63,865	1/1:0,26:26:78.03:940,78,0	1/1:0,26:26:75.23:922,75,0	1/1:2,36:38:99:1263,102,0	0/0:25,0:25:72.21:0,72,980	0/0:24,0:24:69.22:0,69,971	0/0:29,0:29:87.28:0,87,1230	0/0:22,0:22:66.20:0,66,918	0/0:38,0:38:99:0,111,1587	1/1:1,29:30:69.22:854,69,0	0/0:8,0:8:24.08:0,24,346
chr10	47049283	.	ACAGAAGTCTGTGGGGAGATGAC	A	14638.42	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=14.308;DP=709;FS=2.438;HRun=0;HaplotypeScore=413.1193;InbreedingCoeff=0.9864;MQ=79.88;MQ0=0;MQRankSum=-11.873;QD=74.69;ReadPosRankSum=1.763;VQSLOD=3.2299;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,135,12765	0/0:14,0:14:42.14:0,42,3668	0/0:29,0:29:61.57:0,62,3334	0/0:24,0:24:55.07:0,55,3029	1/1:7,11:18:15.05:716,15,0	0/0:21,0:21:57.20:0,57,4950	0/0:42,0:42:99:0,108,8695	1/1:15,7:22:21.06:578,21,0	0/0:22,0:22:60.19:0,60,5478	1/1:11,18:29:54.17:2936,54,0	1/1:2,11:13:30.10:1611,30,0	0/0:37,0:37:99:0,105,9908	0/0:28,0:28:81.28:0,81,6851	1/1:7,10:17:24.08:1433,24,0	0/0:37,0:37:99:0,99,8956	0/0:35,0:35:99:0,102,8991	1/1:17,9:26:18.06:1075,18,0	1/1:8,4:12:9.03:538,9,0	0/0:18,0:18:51.18:0,51,3476	0/0:18,0:18:51.18:0,51,4362	0/0:45,0:45:99:0,120,10585	0/0:21,0:21:60.21:0,60,4908	0/0:19,0:19:48.16:0,48,4358	0/0:34,0:34:90.28:0,90,8073	1/1:10,12:22:30.10:1702,30,0	1/1:11,16:27:48.16:2628,48,0	0/0:20,0:20:54.17:0,54,4633	1/1:2,8:10:24.08:1422,24,0
chr10	47049820	.	C	CT	2766.74	PASS	AB=0.845;AC=20;AF=0.357;AN=56;BaseQRankSum=1.927;DP=604;FS=0.000;HRun=11;HaplotypeScore=97.0050;InbreedingCoeff=0.8315;MQ=65.28;MQ0=3;MQRankSum=-2.495;QD=13.17;ReadPosRankSum=-1.477;VQSLOD=3.3050;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:34:75.02:0,75,568	0/0:14,0:14:35.85:0,36,276	0/1:11,0:7:0:0,0,0	0/0:15,0:12:6:0,6,96	0/1:11,9:19:16.42:203,0,16	0/0:14,1:15:8.39:0,8,248	0/0:28,0:28:55.70:0,56,424	1/1:11,10:22:33.37:319,33,0	0/0:20,0:21:35.25:0,35,275	1/1:11,10:21:9.75:259,10,0	1/1:3,11:14:24.05:242,24,0	0/0:27,0:29:57.78:0,58,427	0/0:16,0:17:28.85:0,29,214	1/1:2,11:12:24.05:243,24,0	0/0:29,0:29:62.71:0,63,485	0/0:24,0:25:46.75:0,47,354	1/1:5,20:26:7.50:466,7,0	1/1:8,15:23:7.48:412,7,0	0/0:26,1:26:20.33:0,20,341	0/0:15,0:15:22.89:0,23,165	0/0:40,0:44:83.20:0,83,617	0/0:19,0:19:38.49:0,38,301	0/0:14,0:14:23.84:0,24,185	0/0:23,1:24:29.32:0,29,411	1/1:7,15:21:10.26:272,10,0	1/1:13,12:25:38.94:356,39,0	0/0:23,0:23:53.70:0,54,411	1/1:4,7:12:21.35:198,21,0
chr10	47053474	.	ATAG	A	14207.75	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=17.180;DP=616;FS=6.560;HRun=0;HaplotypeScore=165.3396;InbreedingCoeff=0.9708;MQ=77.62;MQ0=0;MQRankSum=-9.435;QD=34.91;ReadPosRankSum=-0.784;VQSLOD=4.9905;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,36:43:99:1331,105,0	1/1:0,7:10:27.09:355,27,0	0/0:11,0:11:26.83:0,27,510	0/0:24,0:24:46.89:0,47,884	1/1:1,16:20:26.67:345,27,0	1/1:2,25:27:75.24:983,75,0	1/1:0,17:17:51.10:608,51,0	1/1:0,23:28:84.18:976,84,0	0/0:25,0:25:75.26:0,75,1814	1/1:0,27:28:84.27:1142,84,0	1/1:1,8:9:18.06:229,18,0	0/0:29,0:29:87.30:0,87,2145	0/0:30,0:30:90.31:0,90,2182	1/1:1,34:35:31.38:1271,31,0	1/1:5,27:32:93.25:1251,93,0	0/0:38,0:38:99:0,114,2797	1/1:0,24:24:63.21:872,63,0	1/1:0,16:16:48.02:646,48,0	1/1:0,9:9:27.09:365,27,0	1/1:0,13:13:27.09:359,27,0	1/1:4,22:27:62.67:810,63,0	0/0:17,0:17:48.16:0,48,1183	0/0:13,0:13:39.12:0,39,881	0/0:22,0:22:66.23:0,66,1601	1/1:2,22:24:66.22:893,66,0	1/1:3,19:23:69.21:904,69,0	1/1:4,17:21:63.18:829,63,0	1/1:0,1:1:3.01:39,3,0
chr10	47053478	.	CT	C	8820.02	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=17.778;DP=623;FS=7.278;HRun=1;HaplotypeScore=161.1383;InbreedingCoeff=0.9678;MQ=78.18;MQ0=0;MQRankSum=-9.943;QD=21.30;ReadPosRankSum=-0.558;VQSLOD=4.1693;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,36:40:85.45:737,85,0	1/1:2,7:9:26.93:218,27,0	0/0:12,0:12:29.36:0,29,357	0/0:24,0:24:15.68:0,16,438	1/1:4,17:21:29.84:240,30,0	1/1:2,25:27:73.80:607,74,0	1/1:0,17:17:49.58:368,50,0	1/1:6,23:29:73.59:553,74,0	0/0:24,0:24:72.25:0,72,1125	1/1:2,27:29:86.93:771,87,0	1/1:1,8:9:15.41:117,15,0	0/0:31,0:31:90.20:0,90,1353	0/0:31,0:31:93.30:0,93,1430	1/1:2,34:36:58.72:802,59,0	1/1:6,28:34:86.20:776,86,0	0/0:37,0:37:99:0,111,1715	1/1:2,24:26:59.73:571,60,0	1/1:1,16:17:50.88:442,51,0	1/1:0,9:9:26.97:238,27,0	1/1:0,15:15:26.97:233,27,0	1/1:6,22:28:53.60:482,54,0	0/0:17,0:17:51.16:0,51,775	0/0:10,0:10:30.10:0,30,469	0/0:23,0:23:69.23:0,69,1077	1/1:2,22:24:65.96:576,66,0	1/1:3,20:23:68.44:558,68,0	1/1:3,17:20:59.81:504,60,0	1/1:0,1:1:3:25,3,0
chr10	47053479	.	T	TAC	5778.66	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=17.470;DP=656;FS=8.014;HRun=0;HaplotypeScore=191.6164;InbreedingCoeff=0.9663;MQ=77.58;MQ0=0;MQRankSum=-7.116;QD=13.16;ReadPosRankSum=-0.682;VQSLOD=3.9458;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:38,5:44:81.55:503,82,0	1/1:8,0:8:21.45:91,21,0	0/0:12,0:12:15.49:0,15,278	0/0:24,0:25:17.61:0,18,431	1/1:22,0:22:26:145,26,0	1/1:27,0:27:64.15:368,64,0	1/1:20,0:20:36.71:219,37,0	1/1:32,0:32:72.72:522,73,0	0/0:26,0:26:72.24:0,72,1171	1/1:29,0:29:74.72:425,75,0	1/1:9,1:10:16.14:113,16,0	0/0:34,0:34:93.27:0,93,1455	0/0:32,0:32:93.30:0,93,1484	1/1:36,0:36:45.31:510,45,0	1/1:30,5:37:69.95:410,70,0	0/0:37,0:37:99:0,108,1760	1/1:27,2:29:68.30:471,68,0	1/1:17,0:17:46.19:318,46,0	1/1:10,0:10:27.75:176,28,0	1/1:18,0:18:24.73:115,25,0	1/1:26,4:30:50.98:332,51,0	0/0:18,0:18:51.17:0,51,809	0/0:10,0:10:30.10:0,30,489	0/0:23,0:23:69.22:0,69,1100	1/1:24,0:24:57.85:269,58,0	1/1:21,2:23:56.55:402,57,0	1/1:17,5:22:55.42:378,55,0	1/1:1,0:1:2.74:12,3,0
chr10	47054825	.	TAC	T	439.28	PASS	AB=0.945;AC=20;AF=0.417;AN=48;BaseQRankSum=-1.286;DP=518;FS=0.921;HRun=0;HaplotypeScore=72.2524;InbreedingCoeff=0.2382;MQ=69.98;MQ0=14;MQRankSum=0.916;QD=1.86;ReadPosRankSum=1.131;VQSLOD=1.3731;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:25:21.16:21,0,36	./.	./.	./.	0/0:19,0:19:8.20:0,8,58	0/1:17,2:19:42.24:42,0,163	0/0:14,0:14:3.01:0,3,43	./.	1/1:8,6:14:5.96:51,6,0	0/0:13,0:13:17.95:0,18,186	0/0:12,0:12:14.98:0,15,141	1/1:14,1:17:2.84:14,3,0	1/1:14,0:14:8.47:94,8,0	0/0:13,0:13:14.68:0,15,145	0/1:18,0:21:22.69:30,0,23	1/1:13,5:18:3.01:32,3,0	0/0:24,0:25:23.96:0,24,214	0/0:12,0:15:14.97:0,15,132	0/1:11,0:11:25.58:26,0,37	0/1:13,0:13:34.63:47,0,35	0/0:29,0:28:0.30:0,0,129	1/1:11,0:10:5.97:51,6,0	1/1:14,0:14:6.02:63,6,0	1/1:26,10:36:11.86:109,12,0	0/0:17,0:17:15:0,15,156	0/0:22,0:22:15.49:0,15,171	0/1:17,0:17:18.42:18,0,120	0/0:7,0:8:3:0,3,26
chr10	47056249	.	GA	G	5846.53	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=12.760;DP=682;FS=0.000;HRun=10;HaplotypeScore=69.7130;InbreedingCoeff=0.9935;MQ=75.78;MQ0=1;MQRankSum=0.617;QD=21.11;ReadPosRankSum=2.659;VQSLOD=5.7006;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,129,1418	0/0:11,0:11:33.09:0,33,365	0/0:17,0:16:11.50:0,12,253	0/0:19,0:17:26.94:0,27,241	1/1:1,20:21:53.93:462,54,0	1/1:1,20:21:59.99:521,60,0	1/1:2,18:20:38.99:339,39,0	1/1:5,29:34:86.70:750,87,0	0/0:20,1:21:22.06:0,22,464	1/1:3,24:27:68.94:594,69,0	1/1:0,17:18:53.03:449,53,0	0/0:28,0:28:78.13:0,78,825	0/0:20,0:22:56.99:0,57,612	1/1:2,17:20:47.02:397,47,0	0/0:31,0:31:78.21:0,78,863	0/0:33,0:33:60.66:0,61,833	1/1:4,27:31:71.98:625,72,0	1/1:2,16:19:47.02:397,47,0	0/0:26,0:28:70.85:0,71,701	0/0:23,0:23:51.14:0,51,564	0/0:27,2:29:32.10:0,32,803	0/0:20,0:21:54.85:0,55,570	0/0:16,0:16:29.57:0,30,322	0/0:18,0:18:45.08:0,45,484	1/1:5,20:25:20.80:410,21,0	1/1:4,27:31:80.95:698,81,0	0/0:36,0:38:84.03:0,84,892	1/1:0,10:10:24:208,24,0
chr10	47058151	.	AG	A	7625.45	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=5.681;DP=575;FS=0.000;HRun=2;HaplotypeScore=82.4307;InbreedingCoeff=0.9984;MQ=86.80;MQ0=1;MQRankSum=-1.551;QD=37.20;ReadPosRankSum=3.709;VQSLOD=5.3538;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,102,1474	0/0:6,0:6:18.06:0,18,270	0/0:26,0:23:52.06:0,52,880	0/0:24,0:24:63.18:0,63,896	1/1:1,21:22:63.20:817,63,0	0/0:18,0:18:48.16:0,48,719	0/0:36,0:36:99:0,108,1565	1/1:0,25:25:72.23:935,72,0	0/0:17,0:17:51.10:0,51,736	1/1:0,25:25:75.24:973,75,0	1/1:0,9:9:27.09:350,27,0	0/0:24,0:24:69.23:0,69,1032	0/0:16,0:16:42.14:0,42,629	1/1:0,21:21:57.19:739,57,0	0/0:23,0:23:69.23:0,69,1025	0/0:25,0:25:63.14:0,63,896	1/1:1,24:25:27.48:850,27,0	1/1:2,23:25:72.16:897,72,0	0/0:12,0:12:36.11:0,36,515	0/0:16,0:16:42.14:0,42,629	0/0:31,0:31:84.23:0,84,1190	0/0:13,0:13:39.13:0,39,577	0/0:13,0:13:36.09:0,36,497	0/0:16,0:16:39.12:0,39,565	1/1:0,18:18:54.18:701,54,0	1/1:0,22:22:66.21:857,66,0	0/0:19,0:19:54.17:0,54,779	1/1:0,13:13:39.13:506,39,0
chr10	47058177	.	ATGTGTGTGTG	A	1548.45	PASS	AB=0.883;AC=23;AF=0.460;AN=50;BaseQRankSum=1.423;DP=481;FS=9.173;HRun=0;HaplotypeScore=169.8590;InbreedingCoeff=0.3861;MQ=63.40;MQ0=8;MQRankSum=-3.740;QD=6.00;ReadPosRankSum=0.241;VQSLOD=2.1547;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:24:3.01:70,3,0	0/0:2,0:2:3.01:0,3,117	./.	./.	0/0:18,0:19:2.50:0,2,9	0/0:19,0:19:12.01:0,12,442	0/0:23,0:25:21.05:0,21,790	0/0:20,0:18:9.11:0,9,73	1/1:8,3:11:9.03:266,9,0	0/1:19,0:21:14.79:15,0,89	./.	0/1:21,0:21:56.36:56,0,96	1/1:11,4:15:8.88:197,9,0	0/0:13,0:17:15.79:0,16,119	0/0:20,0:21:21.07:0,21,834	0/1:13,8:22:1.94:407,0,2	0/1:21,0:25:1.01:1,0,200	0/0:21,0:22:18.36:0,18,245	1/1:8,0:9:3.01:70,3,0	0/1:10,0:10:0:0,0,0	0/1:24,0:23:0:0,0,0	1/1:10,3:12:5.97:55,6,0	1/1:9,2:10:6.01:66,6,0	1/1:11,2:13:5.75:151,6,0	0/0:13,0:14:4.90:0,5,110	0/1:17,0:20:71.57:72,0,81	1/1:11,0:16:12.04:279,12,0	0/0:11,0:11:9.03:0,9,257
chr10	47058258	.	GGGT	G	578.37	PASS	AB=0.978;AC=15;AF=0.268;AN=56;BaseQRankSum=-0.549;DP=379;FS=8.129;HRun=0;HaplotypeScore=70.8865;InbreedingCoeff=0.1140;MQ=76.21;MQ0=0;MQRankSum=2.055;QD=3.46;ReadPosRankSum=-3.397;VQSLOD=-0.5433;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:46.99:0,47,722	1/1:6,1:7:3.74:12,4,0	0/0:8,0:8:18.04:0,18,299	0/0:17,0:17:8.26:0,8,377	1/1:11,0:11:8.21:76,8,0	0/0:15,0:15:6.93:0,7,46	0/1:17,1:18:37.28:102,0,37	0/1:17,0:17:12.13:134,0,12	0/0:14,0:14:30.04:0,30,480	0/1:13,0:13:20.96:110,0,21	0/1:7,0:7:1.42:1,0,11	0/0:14,0:14:39.08:0,39,619	0/0:13,0:13:33.06:0,33,532	0/1:12,0:12:31.02:65,0,31	0/1:13,1:14:10.85:11,0,33	0/0:10,0:10:26.87:0,27,348	0/1:21,2:23:48.36:48,0,52	0/1:23,0:23:56.52:73,0,57	0/0:14,0:13:31.30:0,31,481	0/0:11,0:11:24.85:0,25,255	0/0:23,0:23:26.93:0,27,314	0/0:10,0:10:24:0,24,381	0/0:5,0:5:12:0,12,208	0/0:17,0:17:48.03:0,48,758	0/1:12,0:12:16.35:17,0,16	1/1:10,0:10:7.28:87,7,0	0/0:11,0:11:15.01:0,15,239	0/0:7,0:7:5.97:0,6,46
chr10	47058259	.	GGT	G	1860.48	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=1.159;DP=374;FS=0.562;HRun=0;HaplotypeScore=58.6576;InbreedingCoeff=0.9144;MQ=76.54;MQ0=0;MQRankSum=0.607;QD=10.39;ReadPosRankSum=-1.169;VQSLOD=2.7096;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:51.71:0,52,573	1/1:1,5:6:6.01:79,6,0	0/0:7,0:7:18.04:0,18,243	0/0:16,0:16:26.43:0,26,282	1/1:9,2:11:20.59:173,21,0	1/1:15,0:15:4.63:15,5,0	1/1:17,1:18:13.59:203,14,0	1/1:15,0:15:23.84:172,24,0	0/0:12,0:12:29.64:0,30,356	1/1:12,1:13:21.41:195,21,0	1/1:6,1:7:9.48:94,9,0	0/0:15,0:15:41.87:0,42,500	0/0:15,0:15:39.03:0,39,468	1/1:11,1:12:18.95:170,19,0	1/1:3,11:14:14.79:176,15,0	0/0:10,0:10:23.81:0,24,260	1/1:22,1:23:42.69:302,43,0	1/1:23,0:23:40.54:281,41,0	0/0:15,0:14:33.06:0,33,429	0/0:11,0:11:21.47:0,21,210	0/0:23,0:23:26.88:0,27,258	0/0:8,0:8:23.81:0,24,289	0/0:5,0:5:14.99:0,15,187	0/0:18,0:18:50.90:0,51,625	1/1:11,1:12:11.57:74,12,0	1/1:10,0:10:19.99:145,20,0	0/0:10,0:10:12.04:0,12,177	0/0:7,0:7:0:0,0,0
chr10	47058260	.	GT	G	2372.36	PASS	AB=0.761;AC=24;AF=0.444;AN=54;BaseQRankSum=1.409;DP=348;FS=1.082;HRun=1;HaplotypeScore=44.7822;InbreedingCoeff=0.7628;MQ=78.03;MQ0=0;MQRankSum=-1.424;QD=14.47;ReadPosRankSum=-0.248;VQSLOD=2.7689;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,1:20:23.24:0,23,428	1/1:6,0:6:5.72:30,6,0	0/0:6,0:6:18.04:0,18,206	0/0:15,0:15:24.94:0,25,277	1/1:10,2:12:20.87:181,21,0	0/1:1,11:12:15.51:70,0,16	1/1:12,6:18:37.16:301,37,0	1/1:0,12:12:29.71:226,30,0	0/0:12,0:12:0.18:0,0,199	1/1:7,4:11:5.31:199,5,0	1/1:5,1:6:11.88:95,12,0	0/0:15,0:15:34.80:0,35,364	0/0:13,0:13:39:0,39,382	1/1:12,0:12:29.86:244,30,0	0/1:14,0:14:13.96:43,0,14	0/0:10,0:10:22.09:0,22,217	1/1:16,4:20:47.36:373,47,0	1/1:12,8:20:51.78:479,52,0	0/0:15,0:14:12.77:0,13,340	0/0:11,0:11:27.38:0,27,217	0/0:23,0:23:26.83:0,27,215	0/0:8,0:8:16.81:0,17,204	0/0:5,0:5:14.99:0,15,155	0/0:18,0:18:41.28:0,41,458	1/1:1,10:11:15.02:163,15,0	1/1:0,10:10:20.55:177,21,0	0/0:7,0:7:12.02:0,12,133	./.
chr10	47059468	.	TA	T	2835.61	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=3.634;DP=346;FS=4.756;HRun=10;HaplotypeScore=43.0466;InbreedingCoeff=0.9436;MQ=80.18;MQ0=0;MQRankSum=-2.197;QD=19.97;ReadPosRankSum=-0.246;VQSLOD=4.0732;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:27:53.97:0,54,270	0/0:1,0:1:3.01:0,3,33	0/0:17,1:17:24.05:0,24,257	0/0:10,0:10:4.19:0,4,59	1/1:5,11:16:26.97:234,27,0	0/0:1,0:9:22.73:0,23,114	0/0:1,0:9:22.73:0,23,114	1/1:0,27:29:85.05:713,85,0	0/0:10,0:10:30.08:0,30,332	1/1:1,12:13:35.99:313,36,0	1/1:0,10:10:23.97:208,24,0	0/0:11,0:11:30.08:0,30,332	0/0:10,0:10:21:0,21,212	1/1:0,7:7:18:156,18,0	0/0:9,0:9:27.07:0,27,299	0/0:12,0:12:36.10:0,36,398	1/1:3,22:25:62.97:547,63,0	1/1:2,9:11:20.99:182,21,0	0/0:14,0:14:39.11:0,39,431	0/0:11,0:11:30.08:0,30,332	0/0:12,0:12:36.10:0,36,398	0/0:8,0:8:24.06:0,24,258	0/0:7,0:7:15.04:0,15,166	0/0:16,0:16:42.10:0,42,455	1/1:2,12:14:29.98:261,30,0	1/1:0,12:12:35.98:308,36,0	0/0:10,0:10:27.06:0,27,290	1/1:0,5:5:15:130,15,0
chr10	47059811	.	CG	C	1850.44	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.954;DP=721;FS=1.870;HRun=1;HaplotypeScore=67.4013;InbreedingCoeff=0.9986;MQ=80.34;MQ0=0;MQRankSum=-0.942;QD=36.28;ReadPosRankSum=1.666;VQSLOD=3.9768;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,132,2077	1/1:0,11:11:33.11:461,33,0	0/0:24,0:24:72.22:0,72,1109	0/0:13,0:13:36.12:0,36,576	0/0:21,0:21:60.19:0,60,934	0/0:16,0:16:48.11:0,48,716	0/0:26,0:26:78.25:0,78,1214	0/0:31,0:31:87.23:0,87,1296	0/0:32,0:32:93.30:0,93,1450	0/0:43,0:43:99:0,129,2030	0/0:11,0:11:33.10:0,33,505	0/0:35,0:35:99:0,105,1654	0/0:25,0:25:75.26:0,75,1198	0/0:41,0:41:99:0,123,1962	1/1:0,40:40:99:1511,108,0	0/0:26,0:26:78.27:0,78,1242	0/0:28,0:28:84.26:0,84,1295	0/0:43,0:42:99:0,129,2045	0/0:23,0:23:69.24:0,69,1099	0/0:18,0:18:54.14:0,54,833	0/0:27,0:27:78.25:0,78,1223	0/0:14,0:14:39.13:0,39,623	0/0:21,0:21:63.21:0,63,1003	0/0:28,0:28:84.29:0,84,1329	0/0:22,0:22:66.22:0,66,1046	0/0:22,0:22:66.23:0,66,1054	0/0:27,0:27:81.26:0,81,1268	0/0:8,0:8:24.05:0,24,357
chr10	47061265	.	C	CT	2652.56	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=5.029;DP=758;FS=4.490;HRun=8;HaplotypeScore=80.6289;InbreedingCoeff=0.9918;MQ=84.91;MQ0=0;MQRankSum=-0.549;QD=25.02;ReadPosRankSum=-0.224;VQSLOD=4.2228;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,132,1198	0/0:8,0:8:21.01:0,21,192	0/0:32,0:30:62.62:0,63,529	0/0:21,0:21:23.11:0,23,324	0/0:25,0:25:59.99:0,60,541	0/0:27,0:27:63.01:0,63,571	0/0:23,0:23:65.91:0,66,591	0/0:41,0:42:99:0,107,953	0/0:21,0:21:54.01:0,54,489	0/0:35,0:35:93.02:0,93,843	0/0:29,1:30:72.02:0,72,656	0/0:24,0:24:63.01:0,63,572	0/0:25,0:25:54:0,54,494	0/0:30,0:30:81.02:0,81,737	0/0:40,0:40:99:0,102,925	0/0:36,0:36:96.03:0,96,874	0/0:16,0:16:42.02:0,42,384	0/0:18,0:18:53.40:0,53,475	1/1:9,21:30:66.16:733,66,0	1/1:3,25:28:78.20:884,78,0	1/1:1,16:17:36.11:415,36,0	0/0:23,0:23:63.01:0,63,572	0/0:26,0:26:66.01:0,66,599	0/0:25,0:25:66.01:0,66,599	0/0:32,0:32:84.02:0,84,765	0/0:27,0:28:74.06:0,74,665	1/1:5,26:31:69.15:781,69,0	0/0:17,1:18:13.41:0,13,377
chr10	47061640	.	CGTGTGAAACAGAACTAAT	C	3721.47	PASS	AB=0.833;AC=3;AF=0.054;AN=56;BaseQRankSum=8.303;DP=787;FS=1.664;HRun=0;HaplotypeScore=372.2307;InbreedingCoeff=0.6478;MQ=79.83;MQ0=0;MQRankSum=-8.158;QD=112.77;ReadPosRankSum=3.151;VQSLOD=2.5581;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:56:99:0,166,12866	0/1:4,1:5:99:420,0,254	0/0:19,0:19:54.18:0,54,2690	0/0:30,0:30:84.27:0,84,5506	0/0:42,0:42:99:0,126,10222	0/0:22,0:22:63.22:0,63,5051	0/0:27,0:27:81.28:0,81,6125	0/0:29,0:29:84.25:0,84,5620	0/0:28,0:28:84.27:0,84,6630	0/0:22,0:22:60.21:0,60,4814	0/0:27,0:27:81.28:0,81,5689	0/0:31,0:31:90.31:0,90,7337	0/0:34,0:34:99:0,99,8004	0/0:32,0:32:93.32:0,93,7552	1/1:6,22:28:63.22:3302,63,0	0/0:24,0:24:69.24:0,69,5620	0/0:31,0:31:87.30:0,87,7083	0/0:21,0:21:60.21:0,60,4863	0/0:24,0:24:69.23:0,69,4606	0/0:35,0:35:99:0,102,7968	0/0:41,0:41:99:0,120,9692	0/0:26,0:26:78.27:0,78,6326	0/0:22,0:22:63.22:0,63,5086	0/0:29,0:29:87.30:0,87,6823	0/0:25,0:25:75.26:0,75,6259	0/0:38,0:38:99:0,114,8271	0/0:26,0:26:78.27:0,78,4810	0/0:13,0:13:39.13:0,39,2551
chr10	47061693	.	GGA	G	1598.15	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=10.540;DP=819;FS=7.255;HRun=0;HaplotypeScore=125.5421;InbreedingCoeff=0.9984;MQ=89.64;MQ0=0;MQRankSum=-10.488;QD=37.17;ReadPosRankSum=1.226;VQSLOD=5.3069;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,126,2353	1/1:0,9:9:27.09:397,27,0	0/0:35,0:35:99:0,102,1801	0/0:30,0:30:75.22:0,75,1332	0/0:44,0:44:99:0,126,2315	0/0:26,0:26:78.27:0,78,1452	0/0:30,0:30:84.29:0,84,1556	0/0:36,0:36:99:0,99,1826	0/0:23,0:23:69.24:0,69,1292	0/0:25,0:25:72.25:0,72,1348	0/0:23,0:23:69.22:0,69,1260	0/0:40,0:40:99:0,117,2182	0/0:25,0:25:75.26:0,75,1375	0/0:40,0:40:99:0,117,2180	1/1:3,31:34:90.30:1323,90,0	0/0:27,0:27:81.28:0,81,1510	0/0:31,0:31:93.31:0,93,1710	0/0:18,0:18:54.19:0,54,1011	0/0:26,0:26:69.24:0,69,1291	0/0:23,0:23:69.22:0,69,1261	0/0:46,0:46:99:0,138,2542	0/0:31,0:31:90.30:0,90,1655	0/0:29,0:29:87.30:0,87,1630	0/0:41,0:41:99:0,123,2272	0/0:27,0:27:78.27:0,78,1450	0/0:31,0:31:90.29:0,90,1635	0/0:19,0:19:54.19:0,54,1009	0/0:8,0:8:24.08:0,24,449
chr10	47061701	.	AGG	A	756.77	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=10.014;DP=813;FS=4.131;HRun=2;HaplotypeScore=124.5776;InbreedingCoeff=0.9986;MQ=88.58;MQ0=0;MQRankSum=-9.925;QD=18.92;ReadPosRankSum=2.996;VQSLOD=1.7579;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,123,2443	1/1:2,7:9:23.36:188,23,0	0/0:37,0:37:99:0,108,2081	0/0:24,0:25:68:0,68,1328	0/0:41,0:41:99:0,123,2441	0/0:25,0:25:75.26:0,75,1502	0/0:31,0:31:93.32:0,93,1862	0/0:35,0:35:99:0,105,2077	0/0:23,0:23:69.24:0,69,1393	0/0:22,0:22:66.23:0,66,1327	0/0:23,0:23:69.24:0,69,1387	0/0:44,0:44:99:0,132,2643	0/0:22,0:22:66.23:0,66,1341	0/0:38,0:38:99:0,114,2279	1/1:4,27:31:80.96:690,81,0	0/0:27,0:27:81.28:0,81,1643	0/0:32,0:32:96.32:0,96,1914	0/0:20,0:20:60.21:0,60,1218	0/0:27,0:27:75.26:0,75,1508	0/0:23,0:23:69.22:0,69,1342	0/0:49,0:49:99:0,147,2911	0/0:31,0:31:93.29:0,93,1799	0/0:29,0:29:87.30:0,87,1749	0/0:39,0:39:99:0,114,2256	0/0:28,0:28:78.27:0,78,1571	0/0:32,0:32:93.31:0,93,1849	0/0:18,0:18:54.19:0,54,1097	0/0:11,0:11:33.09:0,33,631
chr10	47061704	.	TTGGCTC	T	1781.06	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=10.143;DP=798;FS=5.093;HRun=0;HaplotypeScore=183.8300;InbreedingCoeff=0.9988;MQ=87.90;MQ0=0;MQRankSum=-9.859;QD=49.47;ReadPosRankSum=2.754;VQSLOD=3.6479;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,123,4440	1/1:1,7:8:24.08:418,24,0	0/0:36,0:36:99:0,105,3713	0/0:23,0:23:69.24:0,69,2403	0/0:38,0:38:99:0,111,4016	0/0:25,0:25:72.25:0,72,2709	0/0:30,0:30:90.31:0,90,3375	0/0:33,0:33:99:0,99,3305	0/0:24,0:24:72.25:0,72,2570	0/0:22,0:22:66.22:0,66,2324	0/0:22,0:22:66.21:0,66,2308	0/0:46,0:46:99:0,138,4926	0/0:27,0:27:81.28:0,81,2862	0/0:37,0:37:99:0,111,3919	1/1:1,27:28:84.29:1484,84,0	0/0:28,0:28:84.29:0,84,3050	0/0:31,0:31:93.31:0,93,3411	0/0:20,0:20:60.19:0,60,2169	0/0:25,0:25:75.21:0,75,2458	0/0:22,0:22:66.22:0,66,2308	0/0:49,0:49:99:0,148,5346	0/0:29,0:29:87.30:0,87,3274	0/0:28,0:28:84.28:0,84,2976	0/0:38,0:38:99:0,114,4240	0/0:27,0:27:78.27:0,78,2895	0/0:31,0:31:93.31:0,93,3259	0/0:19,0:19:57.20:0,57,2143	0/0:11,0:11:33.11:0,33,1240
chr10	47061976	.	A	ATGGGGGTGGGGG	2346.16	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=-1.795;DP=726;FS=9.550;HRun=0;HaplotypeScore=236.4417;InbreedingCoeff=0.7543;MQ=82.58;MQ0=0;MQRankSum=-6.564;QD=55.86;ReadPosRankSum=-0.902;VQSLOD=1.3587;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:87.30:0,87,2938	1/1:1,3:4:12.04:689,12,0	0/0:27,0:27:66.20:0,66,2008	0/0:22,0:22:45.15:0,45,1295	0/0:38,0:37:99:0,114,3869	0/0:20,0:20:60.18:0,60,1983	0/0:21,0:21:48.16:0,48,1579	0/0:31,0:31:75.26:0,75,2449	0/1:24,0:24:75.17:75,0,2098	0/0:33,0:33:93.32:0,93,3210	0/0:21,0:21:51.16:0,51,1685	0/0:41,0:41:99:0,111,3780	0/0:21,0:21:51.18:0,51,1733	0/0:24,0:24:63.20:0,63,2060	1/1:7,6:14:30.10:1708,30,0	0/0:30,0:30:84.26:0,84,2732	0/0:27,0:27:69.24:0,69,2423	0/0:31,0:31:81.23:0,81,2658	0/0:19,0:19:51.18:0,51,1690	0/0:45,0:45:99:0,123,4289	0/0:30,0:30:81.26:0,81,2649	0/0:21,0:21:57.18:0,57,1929	0/0:30,0:30:87.30:0,87,3106	0/0:29,0:29:81.26:0,81,2696	0/0:23,0:23:66.20:0,66,2283	0/0:36,0:36:93.30:0,93,3233	0/0:26,0:26:78.20:0,78,2460	0/0:4,0:4:12.04:0,12,431
chr10	47062121	.	T	TG	15851.38	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=5.230;DP=802;FS=0.822;HRun=1;HaplotypeScore=92.9403;InbreedingCoeff=0.9920;MQ=89.47;MQ0=0;MQRankSum=-2.080;QD=41.60;ReadPosRankSum=1.105;VQSLOD=5.0377;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:49:99:0,144,1870	1/1:0,3:3:9.03:135,9,0	0/0:29,0:29:81.16:0,81,974	0/0:33,0:33:73.71:0,74,1167	1/1:1,30:32:90.30:1339,90,0	1/1:1,25:26:75.25:1124,75,0	1/1:0,22:22:57.19:854,57,0	1/1:2,37:39:99:1596,108,0	0/0:24,0:24:72.22:0,72,920	1/1:1,27:28:84.28:1256,84,0	1/1:0,28:28:78.26:1167,78,0	0/0:26,0:26:78.24:0,78,998	0/0:25,0:25:72.22:0,72,920	1/1:0,27:27:81.27:1214,81,0	1/1:0,20:20:60.20:898,60,0	0/0:40,0:40:99:0,120,1558	1/1:0,47:47:99:1889,126,0	1/1:1,35:36:96.32:1433,96,0	0/0:25,0:25:72.22:0,72,909	0/0:26,0:26:75.24:0,75,974	0/0:50,0:50:99:0,147,1892	0/0:14,0:14:42.14:0,42,545	0/0:20,0:20:57.17:0,57,726	0/0:34,0:34:99:0,102,1307	1/1:0,21:21:57.19:854,57,0	1/1:1,36:37:99:1597,108,0	0/0:25,0:25:75.24:0,75,973	1/1:1,14:15:33.11:495,33,0
chr10	47062401	.	A	ATT	2918.85	PASS	AB=0.991;AC=49;AF=0.875;AN=56;BaseQRankSum=-4.293;DP=465;FS=0.690;HRun=8;HaplotypeScore=95.2030;InbreedingCoeff=0.1902;MQ=70.31;MQ0=9;MQRankSum=0.552;QD=6.76;ReadPosRankSum=3.215;VQSLOD=-0.4721;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,14:19:35.16:532,35,0	1/1:5,0:5:6.83:24,7,0	0/1:26,0:9:9.28:9,0,119	0/0:33,0:17:23.38:0,23,192	1/1:25,0:27:14.64:96,15,0	1/1:0,0:13:17.69:65,18,0	1/1:0,0:8:7.49:26,7,0	1/1:43,0:45:21.92:121,22,0	1/1:3,7:10:8.67:140,9,0	1/1:13,0:14:17.32:86,17,0	1/1:14,0:14:13.57:61,14,0	1/1:3,4:7:12:163,12,0	1/1:2,4:6:9.03:143,9,0	1/1:8,0:8:4.52:18,5,0	1/1:13,0:12:19.90:95,20,0	1/1:2,17:18:27.09:417,27,0	1/1:18,0:20:12.33:40,12,0	0/1:31,0:31:13.90:51,0,14	0/1:21,1:22:18.49:133,0,18	1/1:23,0:23:8.34:40,8,0	0/1:12,0:12:4.64:5,0,5	1/1:4,1:5:3.48:47,3,0	1/1:0,10:10:18.06:274,18,0	1/1:4,7:10:12.04:184,12,0	1/1:13,0:13:16.81:63,17,0	1/1:21,0:21:32.48:126,32,0	0/1:11,0:11:12.65:13,0,13	1/1:16,0:17:23.55:86,24,0
chr10	47062409	.	TC	T	3200.87	PASS	AB=0.995;AC=37;AF=0.661;AN=56;BaseQRankSum=-4.354;DP=438;FS=6.481;HRun=1;HaplotypeScore=77.0575;InbreedingCoeff=0.4617;MQ=67.63;MQ0=10;MQRankSum=0.754;QD=9.07;ReadPosRankSum=-1.815;VQSLOD=0.3676;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:18:24.10:0,24,98	1/1:5,0:5:12.97:63,13,0	0/1:24,1:8:11:11,0,98	0/0:28,3:15:1.25:0,1,83	1/1:26,0:26:54.22:285,54,0	0/0:13,0:13:6.52:0,7,36	0/0:8,0:8:9.96:0,10,46	1/1:38,1:39:78.77:401,79,0	0/0:9,0:9:7.07:0,7,35	1/1:13,1:13:22.11:173,22,0	1/1:15,1:15:17.21:147,17,0	0/1:6,0:6:3.26:12,0,3	0/0:5,0:5:3.57:0,4,11	1/1:8,0:8:23.08:132,23,0	1/1:12,1:12:33.18:185,33,0	0/1:18,0:17:5.14:5,0,21	1/1:19,2:21:30.60:247,31,0	1/1:29,0:29:54.96:334,55,0	0/1:18,0:18:3.09:132,0,3	1/1:20,0:20:49.97:258,50,0	1/1:11,0:11:28.14:150,28,0	0/1:3,0:3:5.60:6,0,6	0/1:9,0:9:5.83:6,0,16	0/1:9,0:8:7.16:13,0,7	1/1:12,1:13:31.66:185,32,0	1/1:22,0:22:46.46:270,46,0	1/1:10,0:10:24.92:151,25,0	1/1:18,0:18:38.94:209,39,0
chr10	47062410	.	CT	C	2150.41	PASS	AB=0.985;AC=30;AF=0.536;AN=56;BaseQRankSum=-3.535;DP=436;FS=8.215;HRun=12;HaplotypeScore=82.9590;InbreedingCoeff=0.5267;MQ=66.53;MQ0=10;MQRankSum=1.348;QD=6.68;ReadPosRankSum=0.428;VQSLOD=2.0313;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:19:33.19:0,33,308	1/1:4,1:5:8.81:56,9,0	0/0:24,0:7:5.96:0,6,47	0/1:29,1:15:4.74:5,0,20	1/1:24,1:25:0.77:145,1,0	0/0:12,0:13:20.88:0,21,196	0/0:8,0:8:15.02:0,15,145	1/1:36,4:40:39.96:376,40,0	0/0:9,0:9:17.87:0,18,143	0/1:14,0:13:11:73,0,11	0/1:15,1:15:4.63:99,0,5	0/0:6,0:6:11.87:0,12,96	0/0:5,0:5:9.02:0,9,90	1/1:8,0:8:19.94:107,20,0	1/1:13,0:12:7.24:91,7,0	0/0:17,0:16:11.92:0,12,194	1/1:20,1:21:12.28:191,12,0	1/1:30,0:30:18.79:203,19,0	0/1:18,0:18:59.93:69,0,60	1/1:20,0:20:41.01:202,41,0	1/1:11,0:11:25.34:135,25,0	0/0:3,0:3:3.41:0,3,19	0/0:9,0:9:15.03:0,15,150	0/1:9,0:8:4.96:5,0,79	1/1:13,0:13:29.18:181,29,0	1/1:21,0:21:33.68:223,34,0	1/1:10,0:10:14.66:87,15,0	0/1:18,0:18:4.53:100,0,5
chr10	47063450	.	T	TA	390.38	PASS	AB=0.619;AC=5;AF=0.089;AN=56;BaseQRankSum=-4.188;DP=451;FS=2.846;HRun=13;HaplotypeScore=50.6470;InbreedingCoeff=0.5822;MQ=62.06;MQ0=2;MQRankSum=1.346;QD=8.13;ReadPosRankSum=0.089;VQSLOD=2.2230;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,21:29:5.49:323,5,0	1/1:1,5:6:9.01:84,9,0	0/0:5,0:4:5.95:0,6,45	0/0:5,0:2:5.94:0,6,41	0/0:23,0:24:45.99:0,46,302	0/0:26,0:26:46.44:0,46,311	0/0:9,0:9:22.86:0,23,149	0/0:25,2:23:7.71:0,8,198	0/0:12,0:12:23.49:0,23,151	0/0:23,0:23:53.47:0,53,370	0/0:15,0:16:16.66:0,17,104	0/0:11,0:11:22.58:0,23,149	0/0:4,0:4:2.96:0,3,21	0/0:13,0:13:32.64:0,33,222	0/1:5,8:13:5.57:96,0,6	0/0:22,0:22:38.12:0,38,252	0/0:27,0:27:68.24:0,68,462	0/0:24,0:25:51.57:0,52,338	0/0:22,0:26:23.35:0,23,259	0/0:13,0:13:18.30:0,18,116	0/0:14,0:14:35.66:0,36,244	0/0:5,0:5:7.15:0,7,44	0/0:9,0:11:22.86:0,23,150	0/0:9,0:9:17.82:0,18,123	0/0:21,0:22:22.01:0,22,266	0/0:20,0:20:26.61:0,27,184	0/0:21,0:21:41.05:0,41,272	0/0:12,0:11:26.71:0,27,183
chr10	47064117	.	T	TTG	3060.98	PASS	AB=0.595;AC=10;AF=0.179;AN=56;BaseQRankSum=-9.692;DP=566;FS=10.168;HRun=0;HaplotypeScore=71.3781;InbreedingCoeff=0.4669;MQ=64.02;MQ0=7;MQRankSum=-0.363;QD=21.41;ReadPosRankSum=0.776;VQSLOD=3.2197;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:10,24:33:20.79:666,0,21	0/0:5,0:6:14.88:0,15,157	0/0:38,0:21:23.97:0,24,311	0/0:46,0:24:40.08:0,40,403	0/0:12,0:12:27.08:0,27,324	0/1:6,8:12:14.91:253,0,15	1/1:9,9:19:1.02:309,1,0	0/0:25,0:26:38.95:0,39,444	0/0:13,0:13:32.93:0,33,374	0/0:17,0:17:36.11:0,36,431	0/0:10,0:11:26.90:0,27,292	0/0:19,0:19:45.14:0,45,539	0/0:20,0:24:56.67:0,57,618	0/0:16,0:16:39.12:0,39,468	0/0:39,0:41:89.87:0,90,1005	0/0:19,0:20:44.97:0,45,517	0/0:21,0:23:47.78:0,48,513	0/0:13,0:13:36.11:0,36,432	1/1:4,9:13:24.08:384,24,0	0/1:2,7:9:14.91:267,0,15	0/1:12,25:37:8.75:848,0,9	0/0:18,0:18:33.10:0,33,396	0/0:9,0:9:24.07:0,24,288	0/0:21,0:22:54:0,54,626	0/0:13,0:15:32.76:0,33,347	0/0:24,0:26:59.83:0,60,658	1/1:4,11:16:32.80:487,33,0	0/0:7,0:8:23.91:0,24,266
chr10	47064308	.	TGC	T	1745.68	PASS	AC=38;AF=0.826;AN=46;BaseQRankSum=-3.521;DP=219;FS=59.037;HRun=0;HaplotypeScore=30.0594;InbreedingCoeff=0.6449;MQ=68.07;MQ0=25;MQRankSum=-2.412;QD=12.21;ReadPosRankSum=-0.195;VQSLOD=1.0013;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,0:10:23.94:191,24,0	0/0:8,0:5:2.29:0,2,34	0/0:15,0:9:26.77:0,27,210	0/0:18,0:10:20.30:0,20,191	1/1:4,0:2:5.99:49,6,0	1/1:11,0:10:23.96:202,24,0	1/1:15,0:14:23.26:190,23,0	1/1:7,0:5:12.01:110,12,0	1/1:4,0:4:8.99:74,9,0	1/1:4,0:4:7.22:80,7,0	./.	1/1:4,0:2:5.99:50,6,0	./.	1/1:8,0:6:1.73:30,2,0	0/0:24,0:24:38.31:0,38,262	1/1:8,0:8:14.98:125,15,0	1/1:2,11:13:6.01:58,6,0	1/1:15,0:15:26.66:225,27,0	1/1:5,0:3:8.93:69,9,0	./.	1/1:13,0:11:15.46:109,15,0	./.	./.	1/1:9,0:9:14.97:121,15,0	1/1:3,0:3:5.99:50,6,0	1/1:4,0:4:6:53,6,0	1/1:3,0:3:8.99:75,9,0	1/1:3,0:2:3.01:32,3,0
chr10	47064760	.	A	ATT	1714.49	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-9.144;DP=644;FS=14.901;HRun=6;HaplotypeScore=73.4404;InbreedingCoeff=0.9988;MQ=76.88;MQ0=1;MQRankSum=-1.880;QD=40.82;ReadPosRankSum=2.593;VQSLOD=2.2304;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:78.24:0,78,949	1/1:0,9:9:24.08:406,24,0	0/0:22,0:20:49.68:0,50,557	0/0:19,0:17:41.97:0,42,448	0/0:22,0:22:60.19:0,60,731	0/0:14,0:14:42.12:0,42,501	0/0:19,0:19:45.12:0,45,537	0/0:30,0:30:72.20:0,72,858	0/0:15,0:15:42.13:0,42,512	0/0:26,0:26:75.23:0,75,913	0/0:20,0:20:54.15:0,54,658	0/0:32,0:32:78.22:0,78,938	0/0:16,0:16:42.13:0,42,512	0/0:22,0:22:63.20:0,63,769	1/1:1,31:33:86.78:1430,87,0	0/0:33,0:33:87.26:0,87,1048	0/0:41,0:41:99:0,108,1317	0/0:21,0:21:60.18:0,60,730	0/0:26,0:26:63.18:0,63,763	0/0:18,0:18:48.14:0,48,585	0/0:35,0:35:99:0,99,1193	0/0:19,0:19:54.16:0,54,654	0/0:17,0:17:48.15:0,48,583	0/0:14,0:14:42.13:0,42,511	0/0:23,0:23:60.17:0,60,719	0/0:25,0:25:72.22:0,72,871	0/0:30,0:30:87.27:0,87,1060	0/0:16,0:16:45.14:0,45,545
chr10	47067142	.	A	ACCAGCAGACAC	25180.15	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=16.011;DP=709;FS=4.527;HRun=0;HaplotypeScore=316.4003;InbreedingCoeff=0.9887;MQ=84.71;MQ0=0;MQRankSum=-17.024;QD=94.31;ReadPosRankSum=1.055;VQSLOD=4.0543;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,166,5846	1/1:3,2:5:15.05:680,15,0	0/0:18,0:18:54.18:0,54,1870	0/0:34,0:34:87.25:0,87,2716	1/1:29,3:34:71.79:2734,72,0	1/1:6,6:13:38.96:1587,39,0	1/1:12,1:13:30.10:1242,30,0	1/1:22,0:22:63.20:1888,63,0	0/0:28,0:28:84.27:0,84,2695	1/1:19,5:24:60.91:2601,61,0	1/1:12,5:17:21.07:999,21,0	0/0:31,0:31:90.30:0,90,3085	0/0:30,0:30:87.28:0,87,3022	1/1:21,7:28:60.28:2469,60,0	1/1:30,11:41:99:4209,102,0	0/0:43,0:43:99:0,126,4169	1/1:20,3:23:45.59:2136,46,0	1/1:8,1:9:21.07:1050,21,0	0/0:20,0:20:57.16:0,57,1630	0/0:17,0:17:51.18:0,51,1828	0/0:53,0:53:99:0,147,4924	0/0:24,0:24:69.24:0,69,2429	0/0:14,0:14:36.12:0,36,1102	0/0:38,0:38:99:0,114,3917	1/1:14,4:18:44.72:1566,45,0	1/1:15,2:17:47.62:1552,48,0	0/0:37,0:37:99:0,108,3760	1/1:1,2:3:9.03:467,9,0
chr10	47067143	.	CTAGGGACTGAAGCTGTTGGGG	C	1631.04	PASS	AB=0.969;AC=12;AF=0.214;AN=56;BaseQRankSum=1.093;DP=713;FS=48.452;HRun=0;HaplotypeScore=430.0679;InbreedingCoeff=-0.2767;MQ=82.92;MQ0=0;MQRankSum=-9.900;QD=6.50;ReadPosRankSum=-2.442;VQSLOD=0.1669;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:56:99:0,169,16060	0/0:6,0:6:9.03:0,9,655	0/0:18,0:18:54.19:0,54,3761	0/0:30,0:30:90.26:0,90,5393	0/1:34,0:34:85.04:85,0,913	0/0:13,0:13:10.11:0,10,1588	0/1:12,0:12:63.95:64,0,244	0/1:23,0:23:99:471,0,199	0/0:30,0:30:90.30:0,90,7695	0/1:25,0:25:99:287,0,1504	0/1:6,10:17:32.49:32,0,410	0/0:30,0:30:90.30:0,90,8557	0/0:30,0:30:90.31:0,90,8691	0/1:28,0:28:99:196,0,2314	0/1:42,0:42:99:209,0,2818	0/0:44,0:44:99:0,132,11450	0/1:23,0:23:99:100,0,1200	0/1:9,0:9:99:100,0,400	0/0:21,0:21:63.18:0,63,3952	0/0:17,0:17:51.18:0,51,3502	0/0:53,0:53:99:0,160,14394	0/0:25,0:25:72.25:0,72,6396	0/0:13,0:13:36.12:0,36,3206	0/0:39,0:39:99:0,117,11060	0/1:18,0:18:26.95:27,0,1118	0/1:17,0:17:99:200,0,1227	0/0:37,0:37:99:0,111,9827	0/1:3,0:3:11.96:12,0,290
chr10	47067144	.	T	TGCTGTAACCTGCC	47793.29	PASS	AB=0.893;AC=26;AF=0.464;AN=56;BaseQRankSum=20.691;DP=877;FS=0.531;HRun=0;HaplotypeScore=454.7047;InbreedingCoeff=0.8674;MQ=76.86;MQ0=0;MQRankSum=-21.814;QD=111.93;ReadPosRankSum=3.462;VQSLOD=4.4461;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:57:99:0,169,6766	1/1:7,2:9:21.54:1110,22,0	0/0:19,0:19:54.19:0,54,2095	0/0:31,0:31:90.23:0,90,3164	1/1:40,5:45:4.23:3871,4,0	1/1:22,7:29:82.48:4175,82,0	1/1:30,1:31:48.14:3980,48,0	0/1:33,0:33:12.87:2653,0,13	0/0:30,0:30:90.26:0,90,3107	1/1:34,5:39:41.58:4990,42,0	0/1:16,5:22:1.95:1700,0,2	0/0:29,0:29:87.30:0,87,3510	0/0:30,0:30:90.30:0,90,3503	1/1:39,7:46:30.13:4660,30,0	1/1:52,11:63:99:7469,157,0	0/0:46,0:46:99:0,132,4860	1/1:25,3:28:60.59:2717,61,0	1/1:11,1:12:33.07:1823,33,0	0/0:20,0:20:57.15:0,57,1883	0/0:17,0:17:51.18:0,51,2032	0/0:54,0:54:99:0,156,5779	0/0:25,0:25:72.23:0,72,2819	0/0:14,0:14:36.12:0,36,1293	0/0:42,0:42:99:0,117,4548	1/1:26,4:30:78.20:3698,78,0	1/1:30,2:32:41.96:3697,42,0	0/0:36,0:36:99:0,108,4273	1/1:6,2:8:24.08:1249,24,0
chr10	47067146	.	G	GC	341.28	PASS	AB=0.978;AC=14;AF=0.250;AN=56;BaseQRankSum=16.323;DP=743;FS=1.619;HRun=0;HaplotypeScore=293.2732;InbreedingCoeff=-0.1831;MQ=83.13;MQ0=0;MQRankSum=-14.143;QD=1.21;ReadPosRankSum=7.452;VQSLOD=1.6839;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:60,0:60:99:0,175,2396	0/1:6,0:6:4.05:4,0,44	0/0:21,0:21:63.19:0,63,846	0/0:30,0:30:90.30:0,90,1229	0/1:18,1:19:43.30:43,0,103	0/1:25,0:25:11.47:11,0,167	0/1:22,1:23:38.87:39,0,194	0/1:17,0:17:48.76:49,0,154	0/0:29,0:29:87.26:0,87,1181	0/1:25,1:26:52.88:53,0,196	1/1:21,1:22:1.50:105,2,0	0/0:29,0:29:87.21:0,87,1192	0/0:30,0:30:90.30:0,90,1259	0/1:33,2:35:93.04:93,0,327	0/1:43,1:44:56.85:57,0,308	0/0:44,0:44:99:0,132,1814	0/1:15,1:16:8.52:9,0,116	0/1:6,0:6:9.81:10,0,32	0/0:19,0:19:54.18:0,54,755	0/0:17,0:17:51.17:0,51,711	0/0:56,0:56:99:0,165,2197	0/0:25,0:25:72.23:0,72,991	0/0:15,0:15:39.05:0,39,504	0/0:41,0:41:99:0,123,1718	0/1:21,0:21:12.22:12,0,164	0/1:22,0:22:1.07:1,0,331	0/0:37,0:37:99:0,111,1535	0/0:8,0:8:1.28:0,1,94
chr10	47067586	.	G	GTTCT	2239.07	PASS	AB=1.000;AC=37;AF=0.661;AN=56;BaseQRankSum=5.774;DP=316;FS=50.267;HRun=0;HaplotypeScore=54.9948;InbreedingCoeff=0.6672;MQ=61.83;MQ0=5;MQRankSum=-4.854;QD=9.10;ReadPosRankSum=-1.440;VQSLOD=0.2950;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,9:13:6:126,6,0	0/1:5,0:5:0.57:1,0,45	0/1:14,0:8:2.26:2,0,28	0/0:15,0:7:8.95:0,9,85	1/1:12,0:11:17.55:101,18,0	1/1:13,0:12:20.93:179,21,0	1/1:10,0:9:14.91:118,15,0	1/1:38,0:37:44.52:337,45,0	0/0:9,0:9:24.04:0,24,299	1/1:7,0:7:12.43:103,12,0	1/1:13,0:11:11.85:137,12,0	0/0:6,0:6:18.04:0,18,241	0/0:4,0:4:3.01:0,3,49	1/1:7,0:4:8.79:51,9,0	0/1:9,0:9:7.26:7,0,33	0/0:12,0:12:27.07:0,27,383	1/1:12,0:12:5.94:44,6,0	1/1:12,0:12:9.03:148,9,0	1/1:11,4:14:21.02:359,21,0	1/1:3,3:6:3.01:68,3,0	1/1:5,0:5:9.01:159,9,0	0/0:5,0:5:15:0,15,146	0/0:10,0:9:20.83:0,21,204	0/0:8,0:7:21.01:0,21,267	1/1:15,0:15:2.98:52,3,0	1/1:10,0:9:14.83:128,15,0	1/1:10,6:16:12:209,12,0	1/1:10,0:10:6.02:103,6,0
chr10	47067610	.	T	TTTCTTTCTTTCTTTCTTTC	5745.06	PASS	AB=0.861;AC=25;AF=0.446;AN=56;BaseQRankSum=-0.740;DP=392;FS=42.673;HRun=0;HaplotypeScore=133.0249;InbreedingCoeff=0.6952;MQ=48.55;MQ0=12;MQRankSum=-5.737;QD=24.98;ReadPosRankSum=-0.401;VQSLOD=2.4109;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:19,0:18:7.24:7,0,114	0/0:6,0:6:9.03:0,9,324	0/1:29,0:5:15.71:16,0,103	0/0:29,0:7:11.77:0,12,127	1/1:13,0:11:23.74:608,24,0	1/1:12,0:11:20.32:348,20,0	1/1:10,0:9:14.89:216,15,0	1/1:38,0:37:41.06:1311,41,0	0/0:12,0:11:30.08:0,30,970	1/1:11,0:11:24.30:418,24,0	1/1:3,0:14:17.80:396,18,0	0/0:10,0:10:12.24:0,12,775	0/0:5,0:4:3.01:0,3,130	1/1:10,0:7:11.84:494,12,0	0/0:9,0:9:12.04:0,12,261	0/0:13,0:13:29.94:0,30,855	1/1:3,0:13:9.92:310,10,0	1/1:3,0:20:8.48:207,8,0	0/0:14,0:12:32.92:0,33,425	0/0:5,0:5:9:0,9,117	0/0:10,0:10:20.29:0,20,168	0/0:6,0:6:15.04:0,15,408	0/0:11,0:9:24.07:0,24,744	0/0:14,0:13:33.04:0,33,946	1/1:2,1:15:2.98:263,3,0	1/1:3,0:10:23.56:831,24,0	0/0:18,0:16:15:0,15,207	0/1:4,0:14:10.11:321,0,10
chr10	47067805	.	GAA	G	2449.47	PASS	AB=0.533;AC=21;AF=0.389;AN=54;BaseQRankSum=-0.712;DP=437;FS=7.706;HRun=13;HaplotypeScore=61.9109;InbreedingCoeff=0.8299;MQ=74.43;MQ0=2;MQRankSum=-2.185;QD=14.32;ReadPosRankSum=1.410;VQSLOD=2.0545;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:4,2:32:8.20:8,0,100	0/0:2,0:2:3.01:0,3,43	0/0:29,0:17:4.39:0,4,184	./.	1/1:2,2:4:8.93:75,9,0	0/0:2,0:13:17.47:0,17,60	0/0:5,0:16:17.47:0,17,60	1/1:10,16:27:50.47:449,50,0	0/0:12,0:11:18.05:0,18,241	1/1:2,8:10:24.03:232,24,0	1/1:1,8:10:5.95:108,6,0	0/0:12,0:15:34.81:0,35,351	0/0:18,0:18:33.11:0,33,476	1/1:2,10:12:24.03:233,24,0	0/0:21,0:21:50.63:0,51,637	0/0:23,0:23:59.62:0,60,775	1/1:4,14:18:26.96:312,27,0	1/1:7,20:25:54.02:520,54,0	0/0:6,0:22:55.52:0,56,503	0/0:2,0:4:8.85:0,9,74	0/0:9,0:13:36.01:0,36,370	0/0:4,0:4:5.92:0,6,42	0/0:17,0:17:35.61:0,36,486	0/0:23,0:26:68.65:0,69,902	1/1:0,5:6:17.52:155,18,0	1/1:1,8:10:26.78:244,27,0	0/0:5,0:14:18:0,18,174	1/1:1,13:13:33.04:320,33,0
chr10	47069236	.	T	TG	25133.42	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-2.028;DP=694;FS=1.224;HRun=2;HaplotypeScore=88.0990;InbreedingCoeff=0.9986;MQ=87.58;MQ0=0;MQRankSum=-11.354;QD=39.27;ReadPosRankSum=5.389;VQSLOD=4.8867;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,26:28:75.25:1073,75,0	1/1:2,7:9:24.08:342,24,0	0/0:24,0:25:54.92:0,55,836	0/0:29,0:29:60.06:0,60,758	1/1:1,19:20:57.19:820,57,0	1/1:4,21:25:72.23:1008,72,0	1/1:3,31:34:87.29:1252,87,0	1/1:0,39:39:99:1619,117,0	1/1:2,23:25:75.25:1077,75,0	1/1:2,27:29:84.24:1168,84,0	1/1:4,11:15:42.11:567,42,0	1/1:4,32:36:99:1406,99,0	1/1:3,17:20:60.18:836,60,0	1/1:3,15:18:51.17:731,51,0	1/1:1,35:36:90.30:1295,90,0	1/1:8,23:31:78.26:1120,78,0	1/1:6,25:31:87.25:1222,87,0	1/1:1,24:25:69.23:982,69,0	1/1:2,20:22:63.19:883,63,0	1/1:3,17:20:57.17:785,57,0	1/1:1,28:29:75.21:1056,75,0	1/1:2,18:20:57.19:803,57,0	1/1:2,12:14:36.12:516,36,0	1/1:2,23:24:60.20:864,60,0	1/1:5,20:25:72.22:1013,72,0	1/1:7,25:32:96.29:1336,96,0	1/1:2,20:22:66.20:928,66,0	1/1:0,10:10:30.10:432,30,0
chr10	47069288	.	GT	G	10196.10	PASS	AB=0.667;AC=47;AF=0.839;AN=56;BaseQRankSum=-6.687;DP=642;FS=1.001;HRun=10;HaplotypeScore=118.5103;InbreedingCoeff=0.9112;MQ=80.93;MQ0=4;MQRankSum=-3.778;QD=19.88;ReadPosRankSum=4.216;VQSLOD=4.2132;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,23:29:65.95:573,66,0	0/0:1,0:12:31.53:0,32,173	0/0:50,1:35:43.36:0,43,518	0/0:35,1:28:23.78:0,24,218	1/1:7,24:31:62.90:541,63,0	1/1:4,18:22:56.98:495,57,0	1/1:7,15:22:47.96:416,48,0	1/1:10,24:34:68.38:591,68,0	1/1:1,16:17:44.98:391,45,0	1/1:3,18:21:56.98:492,57,0	1/1:2,14:16:38.98:338,39,0	1/1:4,21:25:62.98:547,63,0	1/1:2,15:17:38.99:338,39,0	1/1:1,16:17:44.99:390,45,0	0/0:9,0:30:77.78:0,78,438	1/1:3,23:26:56.94:489,57,0	1/1:5,20:26:59.57:499,60,0	1/1:5,13:18:41.97:364,42,0	1/1:7,15:22:17.48:368,17,0	1/1:4,15:19:23.59:365,24,0	0/1:8,8:16:0.88:158,0,1	1/1:2,21:23:62.97:546,63,0	1/1:2,22:24:62.98:546,63,0	1/1:5,7:11:14.66:130,15,0	1/1:3,18:21:50.98:442,51,0	1/1:6,23:29:68.96:599,69,0	1/1:1,19:20:53.99:469,54,0	1/1:1,4:6:14.02:110,14,0
chr10	47069381	.	AT	A	1068.95	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.038;DP=606;FS=9.296;HRun=5;HaplotypeScore=63.1061;InbreedingCoeff=0.9972;MQ=71.52;MQ0=0;MQRankSum=-0.219;QD=28.13;ReadPosRankSum=1.235;VQSLOD=3.6872;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:87.22:0,87,1165	0/0:12,0:12:36.12:0,36,492	0/0:10,0:10:27.50:0,28,331	0/0:10,0:9:21.06:0,21,267	0/0:26,0:26:69.12:0,69,893	1/1:0,19:19:48.14:544,48,0	1/1:0,19:19:57.16:646,57,0	0/0:30,0:30:72.22:0,72,945	0/0:16,0:16:45.14:0,45,598	0/0:32,0:32:92.97:0,93,1226	0/0:24,0:24:72.22:0,72,954	0/0:28,0:28:84.28:0,84,1148	0/0:18,0:18:54.14:0,54,715	0/0:17,0:17:51.14:0,51,665	0/0:33,0:33:96.31:0,96,1294	0/0:32,0:32:87.26:0,87,1156	0/0:34,0:34:96.32:0,96,1307	0/0:22,0:22:66.22:0,66,896	0/0:25,0:25:75.18:0,75,961	0/0:22,0:22:60.20:0,60,819	0/0:15,0:15:42.13:0,42,559	0/0:18,0:18:54.18:0,54,738	0/0:20,0:20:54.18:0,54,737	0/0:13,0:13:38.98:0,39,469	0/0:29,0:29:87.29:0,87,1187	0/0:21,0:21:63.20:0,63,847	0/0:21,0:21:60.17:0,60,785	0/0:11,0:11:33.11:0,33,450
chr10	47069940	.	C	CTTTT	10799.25	PASS	AB=1.000;AC=25;AF=0.446;AN=56;BaseQRankSum=8.558;DP=616;FS=6.930;HRun=9;HaplotypeScore=142.5882;InbreedingCoeff=0.7844;MQ=66.29;MQ0=2;MQRankSum=-10.981;QD=32.33;ReadPosRankSum=-2.866;VQSLOD=1.7260;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:40:82.84:513,83,0	0/1:9,0:8:55.81:56,0,195	0/0:19,0:17:39.10:0,39,541	0/1:21,0:18:15.69:16,0,298	1/1:20,9:30:72.53:1221,73,0	0/0:17,0:17:42.07:0,42,575	0/0:11,0:11:24.03:0,24,331	1/1:30,2:34:57.07:879,57,0	0/0:20,0:20:54.15:0,54,770	1/1:21,9:30:69.18:1351,69,0	1/1:1,16:17:42.03:848,42,0	0/0:27,0:27:81.21:0,81,1106	0/0:28,0:28:75.10:0,75,1075	1/1:17,3:23:51.01:845,51,0	0/1:19,0:18:99:135,0,238	0/0:22,0:23:60.12:0,60,818	1/1:14,6:20:45.06:815,45,0	1/1:5,13:18:30:634,30,0	0/0:17,0:17:39.01:0,39,507	0/0:19,0:19:55.03:0,55,751	0/0:9,0:9:27.07:0,27,375	0/0:21,0:22:51.08:0,51,685	0/0:27,0:27:63.14:0,63,901	0/0:22,0:22:60.17:0,60,876	1/1:5,25:30:59.86:1253,60,0	1/1:24,9:33:90.26:1703,90,0	0/0:20,0:20:51.09:0,51,705	1/1:3,6:9:27.07:532,27,0
chr10	47069950	.	G	GTTTGTT	8137.49	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=5.801;DP=631;FS=5.496;HRun=0;HaplotypeScore=162.7924;InbreedingCoeff=0.9821;MQ=60.27;MQ0=6;MQRankSum=-11.555;QD=29.27;ReadPosRankSum=-2.606;VQSLOD=3.9870;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:49.36:0,49,989	1/1:7,4:10:9.03:292,9,0	0/0:25,0:18:24.04:0,24,383	0/0:18,0:15:14.23:0,14,214	1/1:13,5:27:50.85:912,51,0	0/0:18,0:18:48.15:0,48,922	0/0:9,0:9:15.03:0,15,270	1/1:25,3:30:22.70:364,23,0	0/0:20,0:20:47.19:0,47,900	1/1:17,5:31:53.14:950,53,0	1/1:12,7:20:41.15:902,41,0	0/0:30,0:30:57.16:0,57,1075	0/0:30,0:30:63.21:0,63,1275	1/1:14,1:22:30.07:607,30,0	1/1:9,14:25:21.07:682,21,0	0/0:25,0:25:54.15:0,54,1000	1/1:11,4:19:20.41:439,20,0	1/1:13,4:18:29.26:583,29,0	0/0:23,0:22:38.70:0,39,584	0/0:20,0:20:39.13:0,39,781	0/0:10,0:10:15.05:0,15,299	0/0:21,0:21:42.14:0,42,820	0/0:25,0:25:45.10:0,45,875	0/0:23,0:23:57.18:0,57,1113	1/1:20,9:31:59.44:1185,59,0	1/1:22,5:33:37.71:768,38,0	0/0:17,0:17:42.14:0,42,850	1/1:4,3:9:21.18:454,21,0
chr10	47070250	.	G	GT	8548.20	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-11.375;DP=702;FS=2.071;HRun=7;HaplotypeScore=66.5314;InbreedingCoeff=0.9999;MQ=75.88;MQ0=0;MQRankSum=-4.252;QD=31.20;ReadPosRankSum=0.467;VQSLOD=4.9881;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,31:33:84.26:1014,84,0	0/0:16,0:16:45.07:0,45,434	0/0:18,0:18:40.30:0,40,374	0/0:23,0:23:50.45:0,50,481	1/1:3,34:37:99:1195,99,0	0/0:25,0:25:72.12:0,72,695	0/0:20,0:20:45.04:0,45,428	1/1:4,22:26:63.19:761,63,0	0/0:18,0:18:45.05:0,45,429	1/1:4,22:26:66.20:792,66,0	1/1:1,19:20:57.17:688,57,0	0/0:30,0:30:87.14:0,87,840	0/0:24,0:24:69.11:0,69,666	1/1:6,19:26:60.05:703,60,0	0/0:39,0:39:99:0,105,1014	0/0:33,0:33:93.15:0,93,898	1/1:3,25:28:69.21:833,69,0	1/1:2,19:21:57.17:688,57,0	0/0:17,0:17:45.06:0,45,431	0/0:24,0:24:66.09:0,66,632	0/0:41,0:41:99:0,117,1130	0/0:20,0:20:54.08:0,54,521	0/0:29,0:29:72.08:0,72,684	0/0:23,0:23:63.10:0,63,608	1/1:2,19:22:54.03:630,54,0	1/1:0,25:25:75.19:880,75,0	0/0:28,0:28:84.12:0,84,805	1/1:0,10:10:30.09:362,30,0
chr10	47072252	.	CT	C	14533.53	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-3.383;DP=697;FS=13.545;HRun=8;HaplotypeScore=73.7223;InbreedingCoeff=0.9683;MQ=67.63;MQ0=3;MQRankSum=-1.778;QD=23.59;ReadPosRankSum=4.924;VQSLOD=4.3599;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:9,4:12:13.13:0,13,85	1/1:2,7:9:18.01:167,18,0	0/0:39,0:27:22:0,22,557	0/0:28,0:20:13.11:0,13,279	1/1:2,18:20:54.08:521,54,0	1/1:1,15:16:45.07:434,45,0	1/1:4,26:30:72.11:695,72,0	1/1:7,27:34:72.10:694,72,0	1/1:1,19:20:54.09:521,54,0	1/1:4,18:22:54.08:521,54,0	1/1:2,16:18:45.05:428,45,0	1/1:4,33:37:93.14:898,93,0	1/1:3,30:32:81.13:781,81,0	1/1:3,26:29:69.10:666,69,0	1/1:5,40:45:99:1071,111,0	1/1:3,28:31:75.11:724,75,0	1/1:3,26:29:72.11:695,72,0	1/1:1,18:19:51.08:492,51,0	1/1:4,14:18:36.05:347,36,0	1/1:2,12:14:30.04:289,30,0	1/1:6,29:35:87.13:840,87,0	1/1:2,19:21:57.09:550,57,0	1/1:0,15:15:42.07:406,42,0	1/1:1,32:33:81.13:781,81,0	1/1:1,22:23:54.09:521,54,0	1/1:3,16:19:48.06:458,48,0	1/1:1,31:32:87.14:840,87,0	1/1:4,10:14:12.56:191,13,0
chr10	47072855	.	C	CG	14556.83	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=11.738;DP=871;FS=19.319;HRun=0;HaplotypeScore=103.0225;InbreedingCoeff=1.0000;MQ=85.01;MQ0=0;MQRankSum=-2.647;QD=42.19;ReadPosRankSum=2.203;VQSLOD=3.0121;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,72:74:99:2966,187,0	0/0:14,0:14:42.12:0,42,551	0/0:25,0:25:48.73:0,49,823	0/0:30,0:30:87.23:0,87,1131	1/1:1,27:28:69.24:1100,69,0	0/0:12,0:12:36.12:0,36,503	0/0:23,0:23:69.15:0,69,876	1/1:0,28:28:84.10:1254,84,0	0/0:21,0:21:63.18:0,63,846	1/1:1,33:34:76.43:1516,76,0	1/1:0,16:16:45.15:716,45,0	0/0:43,0:43:99:0,129,1751	0/0:38,0:38:99:0,111,1469	1/1:0,25:25:72.25:1149,72,0	0/0:42,0:42:99:0,126,1694	0/0:43,0:42:99:0,129,1771	1/1:0,33:33:84.29:1340,84,0	1/1:0,21:21:54.10:819,54,0	0/0:21,0:21:63.12:0,63,807	0/0:32,0:32:90.29:0,90,1240	0/0:44,0:44:99:0,126,1708	0/0:28,0:28:78.25:0,78,1073	0/0:29,0:29:84.22:0,84,1117	0/0:47,0:47:99:0,141,1935	1/1:0,34:34:90.01:1429,90,0	1/1:1,39:40:99:1694,108,0	0/0:34,0:34:99:0,99,1365	1/1:0,12:12:36.12:575,36,0
chr10	47073271	.	G	GTT	13719.20	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=19.546;DP=815;FS=4.049;HRun=4;HaplotypeScore=112.3250;InbreedingCoeff=1.0000;MQ=83.54;MQ0=0;MQRankSum=-3.471;QD=42.61;ReadPosRankSum=0.729;VQSLOD=3.7797;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,34:41:99:1766,105,0	0/0:16,0:16:45.15:0,45,600	0/0:32,0:32:90.18:0,90,1148	0/0:30,0:30:66.20:0,66,856	1/1:1,19:21:48.08:791,48,0	0/0:23,0:23:60.19:0,60,800	0/0:25,0:25:69.18:0,69,873	1/1:7,24:33:84.17:1312,84,0	0/0:39,0:39:99:0,114,1503	1/1:4,25:31:81.20:1360,81,0	1/1:3,12:17:38.96:555,39,0	0/0:29,0:29:78.24:0,78,1024	0/0:36,0:36:93.30:0,93,1236	1/1:2,25:28:69.24:1242,69,0	0/0:48,0:48:99:0,141,1834	0/0:39,0:38:99:0,117,1545	1/1:3,30:35:66.23:1188,66,0	1/1:5,26:31:81.08:1291,81,0	0/0:20,0:20:51.16:0,51,680	0/0:24,0:24:63.20:0,63,840	0/0:36,0:36:96.31:0,96,1280	0/0:15,0:15:42.09:0,42,540	0/0:23,0:23:66.20:0,66,860	0/0:25,0:25:69.18:0,69,871	1/1:3,27:33:90.26:1569,90,0	1/1:2,31:33:96.26:1619,96,0	0/0:33,0:33:99:0,99,1288	1/1:0,19:19:57.20:1026,57,0
chr10	47074081	.	ACTC	A	8279.59	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=16.617;DP=790;FS=4.171;HRun=0;HaplotypeScore=115.0951;InbreedingCoeff=0.9998;MQ=92.93;MQ0=0;MQRankSum=-3.473;QD=41.82;ReadPosRankSum=5.472;VQSLOD=5.7626;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,120,2611	0/0:11,0:11:27.09:0,27,594	0/0:35,0:35:90.29:0,90,1818	0/0:36,0:36:71.33:0,71,1790	0/0:16,0:16:42.14:0,42,910	0/0:18,0:18:54.19:0,54,1192	0/0:21,0:21:60.18:0,60,1265	0/0:41,0:41:99:0,114,2422	1/1:2,16:18:42.14:675,42,0	0/0:27,0:27:81.28:0,81,1778	0/0:14,0:14:42.14:0,42,910	1/1:1,39:41:99:1880,117,0	1/1:2,32:34:96.33:1543,96,0	0/0:37,0:37:99:0,102,2176	0/0:39,0:39:99:0,114,2461	1/1:1,29:30:81.28:1302,81,0	0/0:46,0:46:99:0,135,2980	0/0:28,0:28:81.26:0,81,1744	0/0:17,0:17:48.15:0,48,966	0/0:26,0:26:75.24:0,75,1609	0/0:32,0:32:84.29:0,84,1826	1/1:0,26:26:66.22:1048,66,0	1/1:0,20:20:51.06:819,51,0	1/1:1,28:29:63.21:1013,63,0	0/0:21,0:21:63.22:0,63,1390	0/0:29,0:29:81.27:0,81,1747	0/0:35,0:34:99:0,99,2184	0/0:21,0:21:54.19:0,54,1192
chr10	47076343	.	CTTT	C	7774.81	PASS	AB=0.533;AC=23;AF=0.411;AN=56;BaseQRankSum=-2.694;DP=712;FS=0.325;HRun=13;HaplotypeScore=123.5289;InbreedingCoeff=0.9263;MQ=74.47;MQ0=3;MQRankSum=-3.563;QD=25.08;ReadPosRankSum=4.752;VQSLOD=3.6434;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,47:53:99:1460,120,0	0/0:7,0:9:22.32:0,22,392	0/0:34,0:25:42:0,42,634	0/0:34,0:26:51.16:0,51,781	1/1:4,17:21:20.78:486,21,0	0/1:2,1:16:13.23:21,0,13	0/0:2,0:22:26.67:0,27,79	1/1:9,29:41:87.42:1030,87,0	0/0:7,0:19:30.06:0,30,389	1/1:3,15:18:45.08:547,45,0	1/1:1,11:12:27.05:328,27,0	0/0:8,0:26:63.21:0,63,952	0/0:3,0:27:54.16:0,54,747	1/1:7,23:30:63.13:766,63,0	0/0:33,0:35:93.25:0,93,1614	0/0:11,0:28:63.19:0,63,971	1/1:9,27:36:66.10:803,66,0	1/1:1,29:32:77.65:911,78,0	0/0:17,0:21:48.12:0,48,822	0/0:19,0:20:57.16:0,57,1029	0/0:17,0:22:55.95:0,56,887	0/0:8,0:28:72.19:0,72,1011	0/0:2,0:13:30.96:0,31,421	0/0:3,0:25:45.60:0,46,623	1/1:4,15:19:42.09:511,42,0	1/1:1,20:21:60.18:730,60,0	0/0:34,0:36:99:0,99,1846	1/1:4,7:11:15.01:182,15,0
chr10	47077406	.	A	ATTT	11815.51	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=19.096;DP=666;FS=6.144;HRun=0;HaplotypeScore=221.9301;InbreedingCoeff=0.9999;MQ=82.05;MQ0=0;MQRankSum=-18.727;QD=53.71;ReadPosRankSum=-0.574;VQSLOD=4.3378;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,18:31:90.11:1596,90,0	0/0:10,0:10:30.10:0,30,559	0/0:25,0:26:73.41:0,73,1283	0/0:27,0:27:78.26:0,78,1368	1/1:8,14:22:66.20:1133,66,0	0/0:25,0:25:75.24:0,75,1366	0/0:24,0:24:69.22:0,69,1246	1/1:17,3:21:63.22:1336,63,0	0/0:27,0:27:81.28:0,81,1509	1/1:12,10:22:66.20:1326,66,0	1/1:4,7:11:33.04:507,33,0	0/0:24,0:24:72.23:0,72,1310	0/0:30,0:30:90.29:0,90,1644	1/1:8,13:22:66.15:1094,66,0	0/0:33,0:33:99:0,99,1811	0/0:32,0:32:96.33:0,96,1789	1/1:6,5:12:36.08:625,36,0	1/1:13,3:17:48:875,48,0	0/0:30,0:30:90.04:0,90,1611	0/0:29,0:29:84.27:0,84,1512	0/0:31,0:31:90.29:0,90,1646	0/0:30,0:30:90.29:0,90,1618	0/0:23,0:23:69.21:0,69,1252	0/0:16,0:16:48.16:0,48,874	1/1:7,7:14:39.08:612,39,0	1/1:8,16:24:72.24:1434,72,0	0/0:29,0:28:87.27:0,87,1563	1/1:14,10:24:66.23:1279,66,0
chr10	47077412	.	TAAAG	T	4904.80	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=16.302;DP=578;FS=0.000;HRun=0;HaplotypeScore=181.5109;InbreedingCoeff=0.9846;MQ=89.10;MQ0=0;MQRankSum=-16.049;QD=44.19;ReadPosRankSum=5.698;VQSLOD=5.1375;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,18:19:57.18:803,57,0	0/0:11,0:11:33.11:0,33,965	0/0:25,0:26:71.83:0,72,1908	0/0:33,0:32:93.32:0,93,2524	1/1:0,13:14:42.14:590,42,0	0/0:25,0:25:75.26:0,75,2163	0/0:25,0:25:75.26:0,75,2166	1/1:0,3:3:9.03:152,9,0	0/0:29,0:29:87.30:0,87,2484	1/1:0,10:10:30.10:514,30,0	1/1:0,7:7:21.07:292,21,0	0/0:24,0:24:72.23:0,72,2012	0/0:28,0:28:84.29:0,84,2409	1/1:0,14:14:42.14:582,42,0	0/0:37,0:37:99:0,111,3150	0/0:39,0:39:99:0,117,3385	1/1:0,5:5:15.05:217,15,0	1/1:1,3:5:13.29:187,13,0	0/0:29,0:29:87.25:0,87,2345	0/0:32,0:32:96.33:0,96,2797	0/0:32,0:32:93.30:0,93,2581	0/0:31,0:31:93.32:0,93,2703	0/0:25,0:25:75.24:0,75,2110	0/0:15,0:15:42.14:0,42,1218	1/1:0,7:7:21.07:307,21,0	1/1:0,16:16:48.16:798,48,0	0/0:26,0:25:78.27:0,78,2259	1/1:1,10:11:30.10:464,30,0
chr10	47077418	.	T	TTTG	5548.41	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=16.277;DP=584;FS=1.248;HRun=0;HaplotypeScore=170.8148;InbreedingCoeff=0.9844;MQ=90.32;MQ0=0;MQRankSum=-15.639;QD=48.25;ReadPosRankSum=5.370;VQSLOD=5.9098;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,18:18:54.18:904,54,0	0/0:12,0:12:33.11:0,33,615	0/0:32,0:32:59.43:0,59,1372	0/0:29,0:28:78.24:0,78,1337	1/1:3,13:16:42.14:635,42,0	0/0:24,0:24:72.25:0,72,1339	0/0:25,0:25:75.23:0,75,1335	1/1:3,3:6:9.50:173,10,0	0/0:28,0:28:84.26:0,84,1504	1/1:2,10:12:33.11:608,33,0	1/1:0,7:7:21.07:336,21,0	0/0:23,0:23:66.23:0,66,1230	0/0:29,0:29:87.30:0,87,1614	1/1:0,14:14:42.06:619,42,0	0/0:36,0:36:99:0,108,1910	0/0:38,0:38:99:0,114,2125	1/1:0,5:5:15.05:262,15,0	1/1:0,3:4:12.04:225,12,0	0/0:30,0:30:87.24:0,87,1581	0/0:33,0:33:96.33:0,96,1784	0/0:32,0:32:93.30:0,93,1701	0/0:33,0:33:99:0,99,1756	0/0:24,0:24:69.19:0,69,1189	0/0:14,0:14:42.14:0,42,783	1/1:0,7:7:21.07:348,21,0	1/1:0,16:16:48.16:896,48,0	0/0:27,0:26:78.27:0,78,1442	1/1:0,10:10:30.10:543,30,0
chr10	47077421	.	AAGAGCT	A	7508.98	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=16.539;DP=590;FS=2.203;HRun=0;HaplotypeScore=201.8788;InbreedingCoeff=0.9909;MQ=88.85;MQ0=0;MQRankSum=-14.781;QD=63.64;ReadPosRankSum=3.891;VQSLOD=5.3660;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,18:18:54.10:1136,54,0	0/0:12,0:12:36.12:0,36,1339	0/0:34,0:34:93.87:0,94,3193	0/0:25,0:24:66.70:0,67,2246	1/1:1,15:16:45.09:911,45,0	0/0:25,0:25:75.24:0,75,2718	0/0:24,0:24:72.25:0,72,2545	1/1:0,6:6:15.05:311,15,0	0/0:29,0:29:87.28:0,87,3117	1/1:0,12:12:36.12:824,36,0	1/1:0,9:9:21.07:426,21,0	0/0:24,0:24:72.24:0,72,2487	0/0:29,0:29:87.30:0,87,3099	1/1:0,14:14:42.14:881,42,0	0/0:35,0:35:99:0,105,3838	0/0:39,0:39:99:0,117,4203	1/1:1,5:6:18.06:401,18,0	1/1:0,4:4:12.04:281,12,0	0/0:31,0:31:93.32:0,93,3381	0/0:34,0:34:99:0,102,3752	0/0:33,0:33:96.33:0,96,3464	0/0:32,0:32:96.33:0,96,3562	0/0:25,0:25:72.25:0,72,2692	0/0:15,0:15:45.15:0,45,1691	1/1:0,7:7:21.07:480,21,0	1/1:0,16:16:48.16:1148,48,0	0/0:26,0:25:78.27:0,78,2801	1/1:0,10:10:30.10:709,30,0
chr10	47077840	.	TCACACACACACACACACACA	T	8033.55	PASS	AB=0.731;AC=16;AF=0.296;AN=54;BaseQRankSum=6.674;DP=629;FS=0.000;HRun=0;HaplotypeScore=326.8589;InbreedingCoeff=0.7355;MQ=57.69;MQ0=5;MQRankSum=-9.769;QD=41.84;ReadPosRankSum=4.946;VQSLOD=2.7052;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:29:36.12:0,36,1956	0/0:5,0:10:18.49:0,18,269	0/0:18,0:12:12.04:0,12,315	0/0:16,0:12:9:0,9,191	0/0:13,0:13:27.09:0,27,1763	0/0:9,0:18:24.07:0,24,753	0/0:27,0:30:30.10:0,30,925	0/0:33,0:33:48.16:0,48,2074	1/1:7,16:23:30.10:1349,30,0	0/0:25,0:26:57.20:0,57,3614	0/0:13,0:13:15.05:0,15,1251	1/1:9,16:25:37.01:1681,37,0	1/1:3,16:19:30.10:1504,30,0	0/0:30,0:30:36.59:0,37,2886	0/0:17,0:38:19.30:0,19,554	1/1:12,23:35:45.15:2130,45,0	0/0:32,0:31:30.10:0,30,2522	0/0:17,0:17:36.12:0,36,2386	0/1:12,0:17:56.06:239,0,56	0/1:11,0:20:44.48:44,0,130	0/0:11,0:19:3.01:0,3,44	1/1:3,17:20:15.05:523,15,0	1/1:6,7:13:0.47:1,0,0	./.	0/0:32,0:30:51.18:0,51,3733	0/0:34,0:33:69.24:0,69,4389	1/1:7,0:20:32.75:562,33,0	0/0:10,0:9:21.54:0,22,1568
chr10	47077843	.	C	CAT	4484.90	PASS	AB=0.742;AC=17;AF=0.304;AN=56;BaseQRankSum=-6.260;DP=630;FS=7.691;HRun=0;HaplotypeScore=178.8689;InbreedingCoeff=0.5285;MQ=56.28;MQ0=6;MQRankSum=8.833;QD=15.47;ReadPosRankSum=0.085;VQSLOD=4.1635;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:28:4.95:244,5,0	0/0:10,0:10:19.37:0,19,187	0/0:17,0:11:22.50:0,23,209	0/0:15,0:11:23.84:0,24,218	0/1:13,0:13:36.41:135,0,36	0/0:17,0:17:22.78:0,23,192	0/0:30,0:28:59.67:0,60,474	1/1:11,26:37:53.35:645,53,0	0/0:22,0:22:44.36:0,44,302	1/1:4,22:27:50.13:725,50,0	0/1:3,10:13:9:165,0,9	0/0:23,0:23:47.48:0,47,330	0/0:19,0:18:35.57:0,36,238	0/1:7,24:33:53.65:379,0,54	0/0:35,0:35:74.76:0,75,635	0/0:34,0:34:74.10:0,74,519	0/1:10,20:32:99:226,0,116	1/1:17,3:20:13.18:465,13,0	0/0:16,0:16:44.70:0,45,339	0/0:17,0:18:17.94:0,18,141	0/0:18,0:18:2.99:0,3,24	0/0:20,0:20:14.80:0,15,103	0/0:13,0:13:14.89:0,15,117	0/0:13,0:13:17.96:0,18,144	1/1:23,9:30:28.38:597,28,0	1/1:9,26:35:29.58:684,30,0	0/0:20,0:20:47.39:0,47,327	0/1:16,0:14:49.83:219,0,50
chr10	47079318	.	CTCAG	C	10627.01	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=9.528;DP=888;FS=33.861;HRun=0;HaplotypeScore=184.3765;InbreedingCoeff=0.9998;MQ=87.71;MQ0=0;MQRankSum=-4.027;QD=46.61;ReadPosRankSum=3.743;VQSLOD=3.7887;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,117,3191	0/0:9,0:9:27.09:0,27,740	0/0:32,0:32:87.23:0,87,2137	0/0:32,0:32:90.29:0,90,2213	0/0:31,0:31:90.30:0,90,2377	0/0:25,0:25:75.26:0,75,1976	0/0:33,0:33:99:0,99,2645	0/0:31,0:31:90.29:0,90,2207	1/1:2,26:28:75.26:1452,75,0	0/0:47,0:47:99:0,138,3754	0/0:36,0:36:99:0,99,2689	1/1:2,36:38:99:1918,99,0	1/1:0,33:33:90.31:1742,90,0	0/0:37,0:37:99:0,108,2956	0/0:41,0:41:99:0,120,3241	1/1:1,37:38:96.27:1859,96,0	0/0:22,0:22:66.23:0,66,1807	0/0:29,0:29:87.30:0,87,2356	0/0:26,0:26:75.25:0,75,1979	0/0:23,0:23:66.23:0,66,1784	0/0:49,0:49:99:0,135,3550	1/1:1,30:31:63.21:1219,63,0	1/1:1,30:31:75.12:1448,75,0	1/1:2,27:29:52.12:989,52,0	0/0:38,0:38:99:0,114,3114	0/0:35,0:35:99:0,99,2633	0/0:32,0:32:96.31:0,96,2511	0/0:13,0:13:36.12:0,36,961
chr10	47080512	.	TCTC	T	7231.05	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=10.699;DP=665;FS=6.127;HRun=0;HaplotypeScore=154.5504;InbreedingCoeff=0.9979;MQ=76.69;MQ0=1;MQRankSum=-3.327;QD=29.88;ReadPosRankSum=2.127;VQSLOD=4.9684;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,37:43:99:1469,99,0	0/0:12,0:12:27.09:0,27,538	0/0:27,0:24:45:0,45,683	0/0:40,0:33:50.44:0,50,891	1/1:3,12:15:24.08:356,24,0	0/0:6,0:25:56.84:0,57,706	0/0:17,0:33:29.02:0,29,470	1/1:13,15:28:48.16:695,48,0	0/0:17,0:17:45.15:0,45,905	1/1:4,16:20:48.13:667,48,0	1/1:2,5:7:18.02:242,18,0	0/0:34,0:34:78.24:0,78,1549	0/0:23,0:23:51.15:0,51,1011	1/1:3,25:29:63.13:932,63,0	0/0:29,0:29:69.22:0,69,1398	0/0:38,0:38:96.32:0,96,1926	1/1:4,13:17:33:489,33,0	1/1:5,15:20:42.14:623,42,0	0/0:16,0:16:45.15:0,45,899	0/0:14,0:14:33.11:0,33,687	0/0:23,0:23:48.15:0,48,944	0/0:23,0:23:45.15:0,45,937	0/0:14,0:14:36.12:0,36,682	0/0:31,0:31:84.29:0,84,1722	1/1:5,15:20:36.08:509,36,0	1/1:11,20:31:42.77:893,43,0	0/0:24,0:24:51.16:0,51,1007	1/1:3,9:12:24.08:356,24,0
chr10	47081801	.	A	ATGCTCACCCCATCCAGTGTCAAG	45615.28	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=4.105;DP=804;FS=9.399;HRun=0;HaplotypeScore=444.1368;InbreedingCoeff=0.9972;MQ=78.75;MQ0=0;MQRankSum=-19.398;QD=168.32;ReadPosRankSum=-3.690;VQSLOD=3.3741;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,129,7357	0/0:6,0:6:15.05:0,15,907	0/0:26,0:26:56.88:0,57,1852	0/0:20,0:20:42.14:0,42,1819	1/1:18,4:24:36.12:1210,36,0	0/0:23,0:23:63.19:0,63,3308	0/0:38,0:38:96.33:0,96,4814	1/1:37,0:37:87.25:4889,87,0	0/0:22,0:22:63.22:0,63,3118	1/1:24,7:33:96.29:8433,96,0	1/1:13,2:15:27.09:1582,27,0	0/0:43,0:43:99:0,108,5670	0/0:26,0:26:75.26:0,75,4045	1/1:27,11:45:99:8426,105,0	0/0:36,0:36:99:0,105,6010	0/0:39,0:39:99:0,102,5207	1/1:16,3:21:45.15:3538,45,0	1/1:18,1:25:48.16:3553,48,0	0/0:22,0:22:47.89:0,48,2133	0/0:30,0:30:72.18:0,72,3714	0/0:61,0:61:99:0,160,8810	0/0:24,0:24:66.22:0,66,3602	0/0:17,0:17:48.16:0,48,2823	0/0:24,0:24:63.20:0,63,3676	1/1:19,7:29:78.27:6423,78,0	1/1:26,2:31:84.29:6175,84,0	0/0:29,0:29:75.24:0,75,4029	1/1:9,2:11:24.08:1386,24,0
chr10	47082167	.	AG	A	1851.67	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.383;DP=845;FS=1.793;HRun=2;HaplotypeScore=107.1617;InbreedingCoeff=0.9816;MQ=83.80;MQ0=0;MQRankSum=-4.640;QD=31.38;ReadPosRankSum=1.728;VQSLOD=3.3865;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,59:59:99:1947,150,0	0/0:10,0:10:30.10:0,30,448	0/0:27,0:27:68.92:0,69,910	0/0:23,0:23:66.18:0,66,953	0/0:22,0:22:60.19:0,60,875	0/0:27,0:27:81.27:0,81,1208	0/0:39,0:39:99:0,111,1636	0/0:32,0:32:87.29:0,87,1304	0/0:32,0:32:96.32:0,96,1419	0/0:31,0:31:90.30:0,90,1348	0/0:7,0:7:15.05:0,15,225	0/0:46,0:46:99:0,129,1898	0/0:29,0:29:87.27:0,87,1262	0/0:36,0:36:99:0,105,1553	0/0:52,0:52:99:0,154,2292	0/0:38,0:38:99:0,111,1663	0/0:26,0:26:75.25:0,75,1122	0/0:38,0:38:99:0,108,1576	0/0:23,0:23:69.21:0,69,992	0/0:20,0:20:60.20:0,60,896	0/0:59,0:59:99:0,175,2582	0/0:30,0:30:90.30:0,90,1348	0/0:8,0:8:24.07:0,24,341	0/0:35,0:35:99:0,102,1490	0/0:20,0:20:57.15:0,57,827	0/0:33,0:33:96.33:0,96,1438	0/0:33,0:33:99:0,99,1456	0/0:10,0:10:30.10:0,30,449
chr10	47083477	.	C	CAGA	12406.43	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=17.861;DP=633;FS=4.286;HRun=0;HaplotypeScore=110.9422;InbreedingCoeff=0.9988;MQ=77.04;MQ0=0;MQRankSum=-7.361;QD=67.79;ReadPosRankSum=2.207;VQSLOD=6.2007;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,120,2228	0/0:12,0:12:30.09:0,30,528	0/0:19,0:19:21.80:0,22,764	0/0:14,0:14:36.07:0,36,576	1/1:0,20:20:54.19:1279,54,0	0/0:31,0:31:93.29:0,93,1670	0/0:21,0:21:60.21:0,60,1107	1/1:0,17:19:57.20:1311,57,0	0/0:27,0:27:81.28:0,81,1500	1/1:0,17:17:51.18:1186,51,0	1/1:0,17:17:48.16:1130,48,0	0/0:46,0:46:99:0,138,2507	0/0:17,0:17:48.14:0,48,825	1/1:0,27:27:78.27:1846,78,0	0/0:25,0:25:75.26:0,75,1398	0/0:30,0:30:90.31:0,90,1665	1/1:0,17:17:51.18:1209,51,0	1/1:0,16:16:42.14:966,42,0	0/0:25,0:25:72.25:0,72,1337	0/0:21,0:21:54.19:0,54,1001	0/0:25,0:25:75.17:0,75,1203	0/0:18,0:18:51.17:0,51,946	0/0:21,0:21:60.17:0,60,1033	0/0:28,0:27:84.23:0,84,1483	1/1:0,21:21:63.22:1493,63,0	1/1:1,21:22:63.22:1494,63,0	0/0:29,0:29:87.28:0,87,1588	1/1:0,7:7:21.07:492,21,0
chr10	47084997	.	A	AC	8250.20	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=6.844;DP=712;FS=4.587;HRun=4;HaplotypeScore=117.4234;InbreedingCoeff=0.9992;MQ=91.85;MQ0=0;MQRankSum=-4.906;QD=34.38;ReadPosRankSum=0.629;VQSLOD=3.9218;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:69.10:0,69,748	0/0:8,0:8:24.04:0,24,260	0/0:34,0:34:81.04:0,81,865	0/0:39,0:39:83.69:0,84,923	1/1:1,14:15:36.10:475,36,0	0/0:15,0:15:45.13:0,45,510	0/0:24,0:24:68.23:0,68,755	1/1:0,24:23:69.11:865,69,0	0/0:28,0:28:69.19:0,69,782	1/1:2,24:26:75.19:1004,75,0	1/1:0,15:16:36.07:469,36,0	0/0:33,0:33:84.19:0,84,930	0/0:27,0:27:78.20:0,78,873	1/1:3,31:34:84.18:1105,84,0	0/0:26,0:26:63.17:0,63,712	0/0:33,0:33:93.24:0,93,1038	1/1:3,28:31:75.25:1025,75,0	1/1:0,29:29:72.24:984,72,0	0/0:13,0:13:33.09:0,33,374	0/0:23,0:23:63.15:0,63,697	0/0:54,0:54:99:0,144,1599	0/0:21,0:21:54.14:0,54,599	0/0:12,0:12:27.04:0,27,293	0/0:29,0:29:54.14:0,54,604	1/1:2,22:23:63.21:861,63,0	1/1:5,27:32:90.16:1134,90,0	0/0:21,0:21:57.16:0,57,646	1/1:1,8:9:24.08:328,24,0
chr10	47085050	.	A	ATGTGTGTGTGTG	7816.01	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=-8.227;DP=791;FS=0.578;HRun=0;HaplotypeScore=346.8624;InbreedingCoeff=0.7934;MQ=65.88;MQ0=19;MQRankSum=-2.335;QD=19.59;ReadPosRankSum=-1.006;VQSLOD=2.6802;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:42,0:42:6.93:182,7,0	1/1:12,0:11:0.47:1,0,0	0/0:72,0:27:14.86:0,15,348	0/0:75,0:38:17.83:0,18,412	0/0:24,0:24:27.39:0,27,715	0/0:14,0:14:0.47:0,0,1	1/1:36,0:36:40.66:1032,41,0	0/0:25,0:25:12.04:0,12,235	1/1:22,2:27:18.06:804,18,0	0/0:19,0:19:27.09:0,27,741	0/1:10,0:10:0:0,0,0	1/1:32,3:37:16.43:854,16,0	1/1:26,4:31:20.88:1031,21,0	0/0:28,0:28:41.16:0,41,971	1/1:30,0:29:3.48:133,3,0	1/1:18,8:30:27.09:1420,27,0	0/0:23,0:22:27.09:0,27,651	0/0:25,0:25:30.10:0,30,682	1/1:21,0:20:24.05:654,24,0	1/1:16,0:15:9.03:216,9,0	1/1:28,0:28:5.44:72,5,0	0/0:15,2:17:0.47:0,0,1	1/1:11,4:19:1.83:3,2,0	1/1:20,9:31:6:344,6,0	0/0:20,0:20:17.96:0,18,420	0/0:36,0:36:57.19:0,57,1342	1/1:27,0:26:30.09:1070,30,0	0/0:10,0:9:12.03:0,12,228
chr10	47085070	.	GT	G	3897.29	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=10.719;DP=724;FS=0.837;HRun=1;HaplotypeScore=194.2409;InbreedingCoeff=0.9570;MQ=56.29;MQ0=34;MQRankSum=-8.188;QD=20.95;ReadPosRankSum=6.596;VQSLOD=3.5304;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:45.69:0,46,575	0/0:10,0:9:8.54:0,9,89	0/0:68,0:31:89.32:0,89,1165	0/0:61,0:26:64.27:0,64,700	1/1:2,19:21:25.06:335,25,0	0/0:13,0:13:18.06:0,18,228	0/0:41,0:41:74.50:0,74,965	1/1:9,4:13:39.10:431,39,0	0/0:25,0:25:34.88:0,35,400	1/1:8,10:17:43.82:521,44,0	1/1:9,2:9:3.84:13,4,0	0/0:40,0:40:54.03:0,54,654	0/0:30,0:30:50.13:0,50,571	1/1:11,19:23:43.27:525,43,0	0/0:29,0:28:17.71:0,18,212	0/0:29,0:29:52.93:0,53,580	1/1:4,12:15:14.29:328,14,0	1/1:9,11:18:51.76:510,52,0	0/0:16,0:15:45.14:0,45,629	0/0:18,0:17:24.08:0,24,337	0/0:21,0:21:27.54:0,28,345	0/0:20,0:20:29.88:0,30,378	0/0:19,0:19:15.10:0,15,174	0/0:32,0:30:26.52:0,27,330	1/1:3,16:17:23.25:255,23,0	1/1:8,20:26:65.08:801,65,0	0/0:23,0:22:54.17:0,54,780	1/1:5,5:5:15.04:179,15,0
chr10	47085074	.	GT	G	3777.13	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=10.771;DP=679;FS=6.773;HRun=1;HaplotypeScore=185.4975;InbreedingCoeff=0.9394;MQ=58.54;MQ0=32;MQRankSum=-8.089;QD=21.96;ReadPosRankSum=7.045;VQSLOD=3.2511;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:42.60:0,43,540	0/0:8,0:7:4.80:0,5,75	0/0:59,0:27:72.33:0,72,992	0/0:57,0:27:42.75:0,43,599	1/1:21,0:21:25.05:320,25,0	0/0:13,0:13:18.06:0,18,229	0/0:41,0:41:74.51:0,75,957	1/1:12,0:12:36.10:409,36,0	0/0:23,0:23:28.48:0,28,298	1/1:15,0:14:42.12:491,42,0	1/1:3,7:8:3.01:31,3,0	0/0:40,0:40:57.06:0,57,701	0/0:28,0:28:44.14:0,44,507	1/1:27,1:21:44.60:539,45,0	0/0:28,0:27:15.35:0,15,191	0/0:26,0:26:46.88:0,47,491	1/1:16,0:15:28.45:344,28,0	1/1:17,0:15:44.90:467,45,0	0/0:15,0:14:35.52:0,36,448	0/0:19,0:18:27.05:0,27,367	0/0:20,0:20:27.05:0,27,355	0/0:21,0:21:32.89:0,33,419	0/0:15,0:15:9.10:0,9,114	0/0:29,0:27:26.57:0,27,333	1/1:19,0:17:28.92:268,29,0	1/1:24,0:22:65.01:731,65,0	0/0:23,0:22:54.08:0,54,694	1/1:10,0:5:15.04:178,15,0
chr10	47085078	.	G	GGTC	4666.50	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=10.407;DP=602;FS=0.393;HRun=0;HaplotypeScore=182.5280;InbreedingCoeff=0.8982;MQ=65.48;MQ0=24;MQRankSum=-9.281;QD=23.45;ReadPosRankSum=4.122;VQSLOD=4.9107;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:52.57:0,53,729	0/0:4,0:4:2.94:0,3,53	0/0:56,0:32:78.19:0,78,1304	0/0:44,0:24:34.63:0,35,792	1/1:22,1:23:26.21:251,26,0	0/0:8,0:8:18.06:0,18,318	0/0:36,0:36:64.15:0,64,964	1/1:15,9:25:63.18:1183,63,0	0/0:18,0:18:0.69:0,1,393	1/1:11,5:15:44.54:553,45,0	1/1:11,0:10:3.01:43,3,0	0/0:28,0:28:57.60:0,58,897	0/0:21,0:21:30.12:0,30,616	1/1:26,1:24:54.48:471,54,0	0/0:17,0:16:17.68:0,18,284	0/0:26,0:26:39.11:0,39,648	1/1:14,1:16:30.15:328,30,0	1/1:13,1:16:47.84:613,48,0	0/0:9,0:8:24.04:0,24,389	0/0:17,0:17:29.74:0,30,396	0/0:16,0:16:30.06:0,30,466	0/0:19,0:19:39.08:0,39,657	0/0:13,0:13:8.69:0,9,159	0/0:27,0:25:29.31:0,29,462	1/1:22,1:21:41.74:531,42,0	1/1:22,2:22:56.62:516,57,0	0/0:15,0:15:42.42:0,42,636	1/1:6,0:5:14.99:177,15,0
chr10	47086221	.	GTCACCCAACA	G	12280.67	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=16.838;DP=720;FS=2.928;HRun=0;HaplotypeScore=217.4487;InbreedingCoeff=0.9928;MQ=77.64;MQ0=0;MQRankSum=-12.675;QD=53.16;ReadPosRankSum=0.299;VQSLOD=4.5449;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,148,6734	0/0:15,0:15:30.10:0,30,1443	0/0:17,0:17:48.11:0,48,1689	0/0:26,0:26:47.08:0,47,1854	1/1:4,17:21:38.62:915,39,0	0/0:29,0:29:81.26:0,81,3459	0/0:21,0:21:54.17:0,54,2155	1/1:13,24:37:65.87:1358,66,0	0/0:23,0:23:60.21:0,60,2996	1/1:6,27:33:78.13:2202,78,0	1/1:2,19:21:45.04:1278,45,0	0/0:24,0:24:69.22:0,69,3261	0/0:30,0:30:78.24:0,78,3526	1/1:4,16:20:30.10:947,30,0	0/0:38,0:38:99:0,105,4813	0/0:33,0:33:87.27:0,87,3645	1/1:2,17:19:30.10:872,30,0	1/1:1,17:18:15.05:473,15,0	0/0:27,0:27:57.20:0,57,2171	0/0:21,0:21:54.17:0,54,2037	0/0:36,0:36:99:0,99,4518	0/0:25,0:25:75.26:0,75,3598	0/0:15,0:15:39.13:0,39,1858	0/0:27,0:27:69.24:0,69,3395	1/1:3,25:28:60.21:1835,60,0	1/1:1,28:29:81.08:2029,81,0	0/0:27,0:27:78.22:0,78,3393	1/1:0,5:5:12.04:372,12,0
chr10	47087022	.	G	GCA	12211.93	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-13.489;DP=806;FS=4.219;HRun=0;HaplotypeScore=94.3652;InbreedingCoeff=0.9732;MQ=76.16;MQ0=0;MQRankSum=-0.487;QD=45.91;ReadPosRankSum=0.879;VQSLOD=5.8766;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,114,1591	0/0:13,0:13:39.13:0,39,559	0/0:18,0:18:51.16:0,51,715	0/0:15,0:17:44.61:0,45,630	1/1:4,14:18:45.15:802,45,0	0/0:28,0:28:81.25:0,81,1123	0/0:40,0:40:99:0,102,1424	1/1:3,27:31:84.27:1496,84,0	0/0:27,0:27:81.23:0,81,1136	1/1:1,29:31:93.32:1696,93,0	1/1:2,7:9:21.07:385,21,0	0/0:34,0:34:99:0,99,1400	0/0:37,0:37:99:0,105,1501	1/1:3,39:42:68.39:1930,68,0	0/0:40,0:40:99:0,111,1571	0/0:38,0:38:99:0,111,1588	1/1:1,46:48:99:1924,105,0	1/1:2,29:31:81.28:1485,81,0	0/0:18,0:18:51.16:0,51,714	0/0:23,0:23:66.19:0,66,906	0/0:59,0:59:99:0,160,2275	0/0:21,0:21:54.18:0,54,772	0/0:23,0:23:54.18:0,54,773	0/0:36,0:36:99:0,108,1528	1/1:0,22:24:60.21:1098,60,0	1/1:1,28:30:75.24:1342,75,0	0/0:23,0:23:66.21:0,66,927	1/1:1,1:2:3.01:55,3,0
chr10	47087203	.	T	TTTCTGCTAGC	25129.48	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-5.116;DP=756;FS=2.228;HRun=0;HaplotypeScore=225.0177;InbreedingCoeff=0.9909;MQ=79.86;MQ0=0;MQRankSum=-18.363;QD=118.54;ReadPosRankSum=-1.141;VQSLOD=4.5464;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,144,4670	0/0:15,0:15:45.15:0,45,1571	0/0:29,0:29:84.29:0,84,2669	0/0:28,0:28:78.10:0,78,2404	1/1:8,10:19:31.10:1135,31,0	0/0:23,0:23:66.23:0,66,2228	0/0:46,0:46:99:0,138,4441	1/1:12,12:26:78.27:3458,78,0	0/0:30,0:30:87.28:0,87,2957	1/1:4,25:33:99:4774,99,0	1/1:3,8:13:27.05:1289,27,0	0/0:33,0:33:96.31:0,96,3212	0/0:31,0:31:93.32:0,93,3196	1/1:5,26:38:90.27:4708,90,0	0/0:39,0:39:99:0,117,3830	0/0:29,0:29:87.29:0,87,2913	1/1:4,7:13:27.09:1388,27,0	1/1:3,8:16:30.10:1540,30,0	0/0:20,0:20:57.19:0,57,1639	0/0:18,0:18:48.16:0,48,1596	0/0:47,0:47:99:0,138,4364	0/0:26,0:26:72.25:0,72,2289	0/0:11,0:11:33.08:0,33,928	0/0:42,0:42:99:0,120,3950	1/1:5,15:23:48.12:2464,48,0	1/1:9,16:28:81.23:3888,81,0	0/0:27,0:26:78.22:0,78,2550	1/1:1,2:3:9.03:487,9,0
chr10	47088955	.	G	GAT	544.64	PASS	AC=4;AF=0.077;AN=52;BaseQRankSum=-0.317;DP=299;FS=10.455;HRun=0;HaplotypeScore=88.4155;InbreedingCoeff=0.6725;MQ=73.27;MQ0=1;MQRankSum=-0.632;QD=14.72;ReadPosRankSum=1.392;VQSLOD=2.8478;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:23.96:0,24,198	1/1:4,4:8:15.05:241,15,0	0/0:18,0:15:30.48:0,30,337	0/0:10,0:4:6.02:0,6,78	./.	0/0:28,0:28:38.62:0,39,370	0/0:17,0:17:23.92:0,24,238	0/0:14,0:13:27.07:0,27,319	0/0:7,0:7:14.91:0,15,118	0/0:10,0:10:15.01:0,15,165	0/0:4,0:4:12.04:0,12,154	0/0:6,0:6:17.98:0,18,163	0/0:8,0:8:14.99:0,15,135	0/0:7,0:7:9.03:0,9,116	1/1:16,13:29:27.08:419,27,0	0/0:6,0:6:15.01:0,15,147	0/0:13,0:13:30.01:0,30,360	0/0:7,0:7:14.92:0,15,183	0/0:18,0:18:36.01:0,36,361	0/0:10,0:10:24:0,24,240	0/0:17,0:17:9.03:0,9,116	./.	0/0:4,0:4:9.02:0,9,99	0/0:4,0:4:11.97:0,12,109	0/0:4,0:4:3.01:0,3,39	0/0:4,0:4:3.01:0,3,39	0/0:9,0:9:15.02:0,15,162	0/0:6,0:6:12.04:0,12,154
chr10	47088964	.	AGT	A	1369.61	PASS	AC=28;AF=0.560;AN=50;BaseQRankSum=-3.594;DP=260;FS=0.891;HRun=0;HaplotypeScore=75.9402;InbreedingCoeff=0.7405;MQ=67.28;MQ0=1;MQRankSum=2.502;QD=8.84;ReadPosRankSum=1.606;VQSLOD=3.1933;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:12,2:14:20.59:157,21,0	1/1:4,0:8:5.61:38,6,0	0/0:15,0:12:17.83:0,18,144	0/0:11,0:3:3.01:0,3,35	./.	1/1:15,13:26:26.62:197,27,0	1/1:10,7:17:14.40:104,14,0	0/0:14,0:10:16.98:0,17,111	1/1:5,0:5:14.33:102,14,0	0/0:6,0:6:8.91:0,9,63	0/0:5,0:4:2.99:0,3,23	1/1:6,0:6:14.94:117,15,0	1/1:6,0:6:11.97:97,12,0	0/0:3,0:3:2.99:0,3,23	1/1:21,0:24:11.47:71,11,0	1/1:5,0:5:14.97:122,15,0	0/0:12,0:12:20.77:0,21,163	0/0:6,0:6:15.79:0,16,122	1/1:14,3:15:28.55:209,29,0	1/1:10,1:11:17.96:147,18,0	0/0:14,0:15:2.96:0,3,19	./.	1/1:3,0:3:5.99:49,6,0	1/1:4,0:4:5.97:45,6,0	0/0:3,0:3:2.99:0,3,24	./.	1/1:6,1:7:11.97:96,12,0	0/0:5,0:5:2.98:0,3,21
chr10	47088971	.	G	GTA	2842.96	PASS	AC=28;AF=0.560;AN=50;BaseQRankSum=-5.196;DP=237;FS=0.852;HRun=0;HaplotypeScore=78.9430;InbreedingCoeff=0.7463;MQ=58.21;MQ0=1;MQRankSum=3.904;QD=18.70;ReadPosRankSum=1.229;VQSLOD=3.6353;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:14:20.95:331,21,0	1/1:11,0:11:12:110,12,0	0/0:11,0:8:17.94:0,18,203	0/0:11,0:3:3.01:0,3,46	./.	1/1:26,1:25:23.84:375,24,0	1/1:17,0:17:14.61:187,15,0	0/0:11,0:7:18.69:0,19,122	1/1:5,0:5:15.05:248,15,0	0/0:4,0:4:8.73:0,9,53	0/0:2,0:1:2.90:0,3,16	1/1:5,0:5:15.05:237,15,0	1/1:5,0:5:12.03:169,12,0	0/0:1,0:1:2.90:0,3,16	1/1:24,0:24:20.92:194,21,0	1/1:5,0:5:15.02:195,15,0	0/0:12,0:12:20.78:0,21,150	0/0:7,0:7:15.99:0,16,97	1/1:19,0:17:7.31:392,7,0	1/1:9,0:9:18.06:272,18,0	0/0:3,10:13:3.01:0,3,32	./.	1/1:2,0:2:6.01:73,6,0	1/1:2,0:2:6.02:93,6,0	0/0:3,0:3:2.94:0,3,18	./.	1/1:7,0:7:12.02:148,12,0	0/0:3,0:2:2.92:0,3,17
chr10	47089005	.	ATG	A	1217.87	PASS	AB=0.890;AC=34;AF=0.739;AN=46;BaseQRankSum=-0.621;DP=255;FS=3.048;HRun=0;HaplotypeScore=84.9382;InbreedingCoeff=0.2595;MQ=39.87;MQ0=2;MQRankSum=4.201;QD=5.94;ReadPosRankSum=1.591;VQSLOD=2.6252;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:16,1:17:26.61:215,27,0	1/1:11,0:12:0.17:87,0,0	./.	0/0:4,0:1:2.88:0,3,15	./.	1/1:1,22:21:5.95:52,6,0	0/1:3,11:14:0.36:0,0,0	0/1:24,0:21:17.91:18,0,265	1/1:5,0:5:5.37:33,5,0	0/0:1,2:3:2.84:0,3,14	0/1:3,0:3:0:0,0,0	1/1:5,0:5:2.99:24,3,0	1/1:1,0:1:3:25,3,0	1/1:9,0:9:2.88:15,3,0	1/1:28,0:29:6.94:191,7,0	1/1:2,0:2:2.94:18,3,0	0/0:4,9:13:0.85:0,1,6	0/0:4,1:5:7.14:0,7,43	1/1:8,4:11:30.66:228,31,0	1/1:9,1:10:8.99:78,9,0	1/1:9,0:8:8.83:63,9,0	./.	./.	./.	1/1:5,0:5:2.99:24,3,0	0/1:7,0:7:25.27:45,0,25	1/1:8,0:8:23.85:185,24,0	1/1:10,0:8:4.70:38,5,0
chr10	47089007	.	G	GTA	2075.43	PASS	AB=0.846;AC=35;AF=0.761;AN=46;BaseQRankSum=0.128;DP=256;FS=1.146;HRun=0;HaplotypeScore=85.8013;InbreedingCoeff=0.1500;MQ=39.90;MQ0=2;MQRankSum=2.791;QD=10.07;ReadPosRankSum=-0.250;VQSLOD=3.3102;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:18:2.34:11,2,0	1/1:9,3:12:12.02:155,12,0	./.	0/0:6,0:3:2.07:0,2,13	./.	1/1:23,0:21:5.95:53,6,0	1/1:14,0:14:2.30:12,2,0	0/1:22,0:22:98.07:98,0,157	1/1:5,0:5:5.37:33,5,0	0/0:3,0:3:4.09:0,4,16	0/0:4,0:4:0:0,0,0	1/1:5,0:5:3.01:49,3,0	1/1:1,0:1:3.01:47,3,0	1/1:0,8:9:3.01:33,3,0	1/1:23,6:29:25.65:411,26,0	1/1:2,0:2:3.01:36,3,0	0/0:12,0:12:0.26:0,0,5	0/1:5,0:5:10.60:21,0,11	1/1:12,0:11:32.98:366,33,0	1/1:11,0:11:9.01:103,9,0	1/1:7,1:7:8.86:113,9,0	./.	./.	./.	1/1:5,0:5:3.01:49,3,0	0/1:1,6:7:17.38:157,0,17	1/1:8,0:8:24.06:317,24,0	1/1:4,6:8:10.75:130,11,0
chr10	47090851	.	AAAAAAC	A	4717.43	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-0.221;DP=583;FS=8.322;HRun=0;HaplotypeScore=166.1718;InbreedingCoeff=0.9259;MQ=57.15;MQ0=2;MQRankSum=-6.823;QD=20.42;ReadPosRankSum=3.373;VQSLOD=3.5510;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:20,11:31:27.05:504,27,0	0/0:13,0:13:21.07:0,21,529	0/0:28,0:18:8.69:0,9,83	0/0:23,0:12:9.03:0,9,262	0/0:26,0:26:48.13:0,48,922	0/0:24,0:24:57.20:0,57,1778	0/0:24,0:24:42.14:0,42,1297	0/0:26,0:26:33.11:0,33,854	1/1:3,10:13:27.09:544,27,0	0/0:24,0:24:42.14:0,42,975	0/0:26,0:26:60.68:0,61,1397	1/1:12,13:25:39.13:786,39,0	1/1:14,5:19:9.03:181,9,0	0/0:18,0:18:27.09:0,27,562	0/0:12,0:23:33.11:0,33,793	1/1:6,19:25:51.17:1027,51,0	0/0:22,0:22:23.82:0,24,457	0/0:20,0:20:43.52:0,44,776	1/1:12,0:17:12.04:156,12,0	1/1:7,0:14:12.04:155,12,0	1/1:13,0:18:3:25,3,0	1/1:5,7:12:21.07:423,21,0	1/1:12,8:20:24.08:484,24,0	1/1:9,8:17:9.03:181,9,0	0/0:29,0:29:63.21:0,63,1523	0/0:16,0:16:23.97:0,24,504	1/1:9,0:19:18.06:251,18,0	0/0:10,0:10:12.04:0,12,301
chr10	47090893	.	C	CAAAAAA	7966.20	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=7.822;DP=612;FS=1.539;HRun=0;HaplotypeScore=182.8375;InbreedingCoeff=0.8982;MQ=59.78;MQ0=17;MQRankSum=-3.162;QD=40.23;ReadPosRankSum=1.324;VQSLOD=4.8376;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:26:63.22:0,63,1306	0/0:9,0:9:27.08:0,27,517	0/0:81,0:28:45.13:0,45,1044	0/0:75,0:32:3.38:0,3,709	1/1:14,9:24:68.25:1168,68,0	0/0:31,0:30:87.27:0,87,2002	0/0:15,0:15:42.13:0,42,918	1/1:26,0:24:71.74:839,72,0	0/0:12,0:12:33.11:0,33,721	1/1:14,5:19:47.91:858,48,0	1/1:8,10:18:53.81:1214,54,0	0/0:18,0:18:54.18:0,54,1148	0/0:7,0:7:18.06:0,18,419	1/1:11,2:13:35.88:503,36,0	0/1:21,0:21:71.59:72,0,715	0/0:25,0:25:69.13:0,69,1391	1/1:16,3:19:40.23:689,40,0	1/1:15,3:18:41.96:712,42,0	0/0:26,0:26:75.11:0,75,1536	0/0:14,0:14:34.05:0,34,676	0/0:16,0:16:36.09:0,36,694	0/0:14,0:14:42.14:0,42,845	0/0:13,0:13:36.12:0,36,808	0/0:15,0:15:29:0,29,658	1/1:12,9:21:62.90:1166,63,0	1/1:9,3:11:30.50:510,31,0	0/0:16,0:16:45.15:0,45,908	1/1:6,1:7:20.92:238,21,0
chr10	47090895	.	CCCA	C	3996.71	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=9.241;DP=613;FS=2.075;HRun=0;HaplotypeScore=164.8715;InbreedingCoeff=0.9665;MQ=59.85;MQ0=17;MQRankSum=-6.613;QD=22.45;ReadPosRankSum=2.575;VQSLOD=3.9327;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:26:72.14:0,72,1383	0/0:9,0:9:23.70:0,24,589	0/0:82,0:28:76.94:0,77,1441	0/0:74,0:31:64.03:0,64,1110	1/1:25,0:25:61.20:489,61,0	0/0:29,0:28:81.28:0,81,1948	0/0:14,0:14:39.12:0,39,912	1/1:23,3:24:5.75:482,6,0	0/0:12,0:12:33.08:0,33,548	1/1:19,0:19:51.81:520,52,0	1/1:18,0:18:49.59:415,50,0	0/0:19,0:19:57.10:0,57,915	0/0:7,0:7:18.06:0,18,366	1/1:10,3:13:35.80:360,36,0	0/0:22,0:22:60.19:0,60,1311	0/0:25,0:25:72.09:0,72,1164	1/1:19,1:20:16.74:387,17,0	1/1:18,1:19:38.84:396,39,0	0/0:28,0:28:84.24:0,84,1793	0/0:13,0:13:34.06:0,34,749	0/0:16,0:16:36.09:0,36,837	0/0:15,0:15:45.07:0,45,783	0/0:13,0:13:39.09:0,39,683	0/0:14,0:14:29.55:0,30,636	1/1:19,1:20:59.52:511,60,0	1/1:10,1:10:28.78:290,29,0	0/0:16,0:16:45.15:0,45,954	1/1:7,0:7:6.81:145,7,0
chr10	47090897	.	CA	C	4072.72	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=9.533;DP=616;FS=1.176;HRun=5;HaplotypeScore=148.5787;InbreedingCoeff=0.9906;MQ=60.94;MQ0=16;MQRankSum=-5.180;QD=22.38;ReadPosRankSum=2.283;VQSLOD=1.8789;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:27:72.15:0,72,845	0/0:9,0:9:26.82:0,27,335	0/0:79,0:28:68.13:0,68,757	0/0:74,1:33:50.43:0,50,534	1/1:6,19:25:50.89:577,51,0	0/0:30,0:29:78.24:0,78,1031	0/0:14,0:14:42.12:0,42,537	1/1:10,17:25:31.08:507,31,0	0/0:12,0:12:30.05:0,30,350	1/1:1,19:20:53.90:526,54,0	1/1:2,15:17:47.38:383,47,0	0/0:19,0:19:51.10:0,51,588	0/0:7,0:7:18.06:0,18,226	1/1:3,10:13:35.83:333,36,0	0/0:22,0:22:60.16:0,60,752	0/0:25,0:25:59.99:0,60,682	1/1:6,15:21:19.53:420,20,0	1/1:2,18:20:15.99:331,16,0	0/0:28,0:28:81.21:0,81,1020	0/0:14,0:14:37.05:0,37,460	0/0:14,0:14:33.07:0,33,444	0/0:15,0:15:36.10:0,36,440	0/0:13,0:13:36.10:0,36,443	0/0:14,0:14:30:0,30,387	1/1:1,19:20:59.87:545,60,0	1/1:3,9:11:12.96:270,13,0	0/0:15,0:15:45.14:0,45,581	1/1:1,6:7:18.01:181,18,0
chr10	47091288	.	CA	C	7974.40	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=4.626;DP=610;FS=4.730;HRun=1;HaplotypeScore=72.2524;InbreedingCoeff=0.9957;MQ=64.81;MQ0=0;MQRankSum=-1.714;QD=40.07;ReadPosRankSum=2.542;VQSLOD=5.6702;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,105,1598	0/0:11,0:11:32.94:0,33,479	0/0:20,0:20:55.06:0,55,812	0/0:14,0:14:39.12:0,39,574	1/1:0,21:21:63.21:881,63,0	0/0:19,0:19:57.16:0,57,864	0/0:26,0:26:78.27:0,78,1247	1/1:0,28:28:81.25:1112,81,0	0/0:27,0:27:81.25:0,81,1248	1/1:0,22:22:66.20:905,66,0	1/1:0,6:6:15.05:210,15,0	0/0:30,0:30:90.29:0,90,1414	0/0:33,0:33:99:0,99,1577	1/1:1,12:13:36.09:482,36,0	0/0:29,0:29:87.28:0,87,1365	0/0:24,0:24:72.24:0,72,1137	1/1:0,44:44:99:1846,132,0	1/1:0,22:22:60.20:839,60,0	0/0:15,0:15:39.13:0,39,623	0/0:22,0:22:63.21:0,63,1006	0/0:31,0:31:90.31:0,90,1438	0/0:12,0:12:36.12:0,36,572	0/0:6,0:6:18.06:0,18,288	0/0:32,0:32:96.31:0,96,1506	1/1:0,16:16:45.15:629,45,0	1/1:0,19:19:57.18:778,57,0	0/0:24,0:24:72.21:0,72,1103	1/1:0,8:8:21.07:294,21,0
chr10	47093631	.	TG	T	5082.72	PASS	AB=0.921;AC=40;AF=0.714;AN=56;BaseQRankSum=-5.376;DP=460;FS=11.688;HRun=10;HaplotypeScore=64.6394;InbreedingCoeff=0.4065;MQ=76.97;MQ0=4;MQRankSum=-1.701;QD=13.31;ReadPosRankSum=7.597;VQSLOD=3.0590;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:13,2:15:20.83:21,0,211	0/0:4,0:4:7.26:0,7,68	0/1:47,0:30:35.42:35,0,326	0/0:34,0:25:34.58:0,35,411	1/1:3,11:14:26.98:234,27,0	0/1:11,2:13:73.19:73,0,132	0/1:17,3:19:58.28:58,0,288	1/1:11,11:21:5.22:175,5,0	1/1:4,11:15:38.98:336,39,0	1/1:1,5:6:11.99:104,12,0	1/1:2,14:17:19.79:320,20,0	1/1:3,11:14:26.99:232,27,0	1/1:3,10:13:32.99:285,33,0	1/1:6,12:19:43.04:350,43,0	0/1:9,1:10:2:2,0,196	1/1:4,16:20:46.83:396,47,0	1/1:3,13:16:38.99:338,39,0	1/1:2,15:17:35.95:305,36,0	0/0:9,0:9:0.65:0,1,74	0/1:6,0:6:15.54:16,0,42	0/0:19,1:20:6.56:0,7,268	1/1:4,6:10:14.96:130,15,0	1/1:6,9:15:33.30:268,33,0	1/1:2,24:26:68.99:599,69,0	1/1:1,16:17:35.99:312,36,0	1/1:3,14:17:41.99:363,42,0	0/0:11,0:11:15.75:0,16,151	1/1:3,9:12:14.99:130,15,0
chr10	47094260	.	TA	T	466.93	PASS	AB=0.900;AC=5;AF=0.089;AN=56;BaseQRankSum=0.697;DP=390;FS=4.182;HRun=9;HaplotypeScore=47.5779;InbreedingCoeff=0.6364;MQ=70.49;MQ0=5;MQRankSum=0.254;QD=12.62;ReadPosRankSum=1.543;VQSLOD=2.8092;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:54.11:0,54,599	0/0:8,0:8:24.06:0,24,269	0/0:18,0:5:5.50:0,6,41	0/0:21,0:10:16.72:0,17,112	0/0:17,0:17:48.14:0,48,554	1/1:3,22:25:57.03:521,57,0	1/1:0,3:3:6:55,6,0	0/0:19,0:19:42.12:0,42,484	0/1:8,1:9:6.40:6,0,187	0/0:13,1:14:14.66:0,15,422	0/0:13,0:13:33.10:0,33,381	0/0:14,0:14:36.08:0,36,396	0/0:9,0:9:27.05:0,27,299	0/0:6,0:6:12.03:0,12,130	0/0:10,0:10:27.08:0,27,312	0/0:17,0:17:45.13:0,45,519	0/0:36,0:36:96.26:0,96,1086	0/0:34,0:34:84.14:0,84,938	0/0:18,0:17:30.08:0,30,337	0/0:13,0:13:30.09:0,30,346	0/0:6,0:6:15.03:0,15,164	0/0:3,0:3:9.03:0,9,104	0/0:5,0:5:12.04:0,12,138	0/0:3,0:3:6.02:0,6,69	0/0:14,0:14:42.11:0,42,476	0/0:12,0:12:36.11:0,36,415	0/0:12,0:11:33.10:0,33,380	0/0:8,0:8:24.07:0,24,277
chr10	47094351	.	A	AAAAC	5974.98	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=0.276;DP=518;FS=7.383;HRun=0;HaplotypeScore=121.3112;InbreedingCoeff=0.9655;MQ=61.63;MQ0=6;MQRankSum=-4.972;QD=38.30;ReadPosRankSum=-2.364;VQSLOD=3.8004;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:19:25.81:400,26,0	0/0:9,0:9:23.98:0,24,247	0/0:18,0:7:3.01:0,3,43	0/0:17,0:9:10.85:0,11,139	0/0:21,0:21:42.11:0,42,653	1/1:18,0:18:45.05:722,45,0	1/1:16,0:16:17.88:467,18,0	0/0:27,0:27:45.13:0,45,660	1/1:8,6:14:33.10:684,33,0	0/0:17,0:17:30.10:0,30,485	0/0:22,0:22:54.18:0,54,876	1/1:8,5:13:30.10:641,30,0	1/1:8,3:13:24.08:521,24,0	0/0:16,0:16:39.11:0,39,584	0/0:21,0:21:40.11:0,40,444	1/1:7,6:14:33.11:665,33,0	0/0:33,0:33:75.23:0,75,1161	0/0:34,0:34:77.38:0,77,1276	0/0:16,0:15:24.08:0,24,387	0/0:21,0:21:45.13:0,45,678	0/0:20,0:20:42.13:0,42,636	1/1:6,5:12:27.06:519,27,0	1/1:13,7:19:36.11:738,36,0	1/1:12,3:15:30.01:618,30,0	0/0:15,0:15:39.10:0,39,544	0/0:17,0:17:33.09:0,33,491	0/0:20,0:19:39.10:0,39,565	0/0:18,0:18:48.13:0,48,731
chr10	47094371	.	CAAAAA	C	1561.06	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=1.014;DP=557;FS=5.955;HRun=5;HaplotypeScore=156.1869;InbreedingCoeff=0.9922;MQ=53.75;MQ0=8;MQRankSum=-3.103;QD=52.04;ReadPosRankSum=0.167;VQSLOD=0.7673;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:20:45.17:0,45,1087	1/1:3,5:9:27.07:501,27,0	0/0:31,0:9:20.78:0,21,356	0/0:18,0:8:17.36:0,17,377	0/0:22,0:22:63.18:0,63,1717	0/0:20,0:20:55.18:0,55,488	0/0:14,0:14:39.13:0,39,292	0/0:24,0:24:69.17:0,69,1357	0/0:19,0:19:57.11:0,57,1233	0/0:17,0:17:51.15:0,51,1228	0/0:19,0:19:57.15:0,57,1466	0/0:14,0:14:41.42:0,41,865	0/0:15,0:15:45.15:0,45,1149	0/0:16,0:16:45.12:0,45,1145	1/1:8,8:21:63.14:1181,63,0	0/0:14,0:14:41.63:0,42,1002	0/0:38,0:38:99:0,111,2786	0/0:34,0:34:99:0,99,2670	0/0:21,0:19:57.14:0,57,1142	0/0:20,0:20:60.15:0,60,1402	0/0:23,0:22:66.17:0,66,1667	0/0:12,0:12:36.10:0,36,907	0/0:18,0:17:46.93:0,47,888	0/0:17,0:17:47.88:0,48,921	0/0:16,0:16:48.14:0,48,1308	0/0:18,0:18:54.14:0,54,1405	0/0:21,0:20:60.14:0,60,1533	0/0:22,0:22:61.43:0,61,1509
chr10	47094376	.	AC	A	968.65	PASS	AB=0.928;AC=10;AF=0.179;AN=56;BaseQRankSum=3.887;DP=553;FS=0.547;HRun=1;HaplotypeScore=117.3940;InbreedingCoeff=0.2134;MQ=55.29;MQ0=9;MQRankSum=-3.343;QD=8.01;ReadPosRankSum=-2.257;VQSLOD=-0.0213;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:19:31.18:0,31,572	0/1:8,0:8:2.15:2,0,38	0/0:35,0:12:28.81:0,29,289	0/0:21,0:8:17.83:0,18,223	0/0:24,0:24:69.18:0,69,925	1/1:4,14:18:31.26:511,31,0	1/1:6,7:13:1.96:231,2,0	0/0:26,0:26:75.18:0,75,954	0/0:18,1:19:7.48:0,7,561	0/0:18,0:18:54.12:0,54,689	0/0:20,0:20:60.19:0,60,836	0/1:13,1:14:49.60:50,0,320	0/0:15,1:16:40.55:0,41,549	0/0:14,0:14:39.11:0,39,537	0/1:20,0:20:50.24:50,0,92	0/1:14,1:15:12.06:12,0,413	0/0:34,0:34:99:0,99,1393	0/0:33,0:33:96.27:0,96,1322	0/0:23,0:20:38.58:0,39,640	0/0:19,0:19:57.15:0,57,758	0/0:22,0:21:63.16:0,63,859	0/0:11,0:11:33.08:0,33,393	0/1:13,4:16:99:143,0,270	0/1:14,2:16:99:112,0,289	0/0:18,0:18:51.12:0,51,673	0/0:16,0:16:48.15:0,48,669	0/0:20,0:19:57.15:0,57,789	0/0:22,0:22:60.30:0,60,821
chr10	47094387	.	C	CA	700.59	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.037;DP=557;FS=9.172;HRun=4;HaplotypeScore=122.7007;InbreedingCoeff=0.9758;MQ=55.88;MQ0=6;MQRankSum=-4.772;QD=21.89;ReadPosRankSum=-0.476;VQSLOD=2.0687;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:20:42.12:0,42,591	0/0:8,0:8:23.93:0,24,210	0/0:35,0:15:33.40:0,33,346	0/0:22,0:10:18.02:0,18,200	0/0:25,0:25:72.22:0,72,863	1/1:6,13:19:42.50:575,42,0	1/1:6,7:13:11.53:242,12,0	0/0:22,0:22:63.16:0,63,723	0/0:22,0:22:53.89:0,54,681	0/0:20,0:20:54.16:0,54,647	0/0:15,0:15:42.11:0,42,491	0/0:14,1:15:38.24:0,38,497	0/0:18,0:18:43.45:0,43,567	0/0:16,0:16:39.10:0,39,456	0/0:21,0:21:59.93:0,60,563	0/0:13,0:13:38.33:0,38,438	0/0:35,0:35:96.28:0,96,1136	0/0:33,0:33:92.83:0,93,1073	0/0:26,0:24:66.19:0,66,780	0/0:16,0:16:45.14:0,45,540	0/0:22,0:21:60.18:0,60,719	0/0:14,0:14:42.13:0,42,502	0/0:15,0:14:28.89:0,29,322	0/0:13,1:14:29.17:0,29,373	0/0:19,0:19:51.16:0,51,612	0/0:20,0:20:60.18:0,60,720	0/0:19,0:19:54.17:0,54,648	0/0:18,0:18:42.13:0,42,503
chr10	47094391	.	CA	C	222.40	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=4.843;DP=565;FS=7.648;HRun=3;HaplotypeScore=126.0624;InbreedingCoeff=0.8562;MQ=56.06;MQ0=5;MQRankSum=-5.195;QD=6.74;ReadPosRankSum=0.813;VQSLOD=0.2726;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:21:20.85:0,21,704	0/0:9,0:9:26.48:0,26,215	0/0:34,0:15:24.83:0,25,404	0/0:19,0:8:14.94:0,15,184	0/0:25,0:25:72.24:0,72,1019	1/1:15,4:19:23.60:184,24,0	1/1:10,4:14:1.16:145,1,0	0/0:23,0:23:66.15:0,66,868	0/0:23,0:23:66.19:0,66,904	0/0:20,0:20:57.16:0,57,780	0/0:13,0:13:36.12:0,36,518	0/0:15,0:15:42.14:0,42,595	0/0:18,0:18:51.02:0,51,675	0/0:17,0:17:48.12:0,48,635	0/0:19,0:19:53.18:0,53,456	0/0:15,0:15:45.12:0,45,589	0/0:35,0:35:93.24:0,93,1278	0/0:35,0:35:91.08:0,91,1214	0/0:29,0:27:75.15:0,75,970	0/0:16,0:16:48.12:0,48,651	0/0:22,0:21:60.17:0,60,841	0/0:14,0:14:42.14:0,42,593	0/0:11,0:10:27.09:0,27,368	0/0:14,0:14:36.07:0,36,485	0/0:18,0:18:54.17:0,54,758	0/0:22,0:22:66.19:0,66,913	0/0:22,0:22:63.16:0,63,849	0/0:20,0:20:51.09:0,51,672
chr10	47094395	.	CAACA	C	672.40	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=6.917;DP=571;FS=0.000;HRun=0;HaplotypeScore=154.8641;InbreedingCoeff=0.6975;MQ=58.39;MQ0=2;MQRankSum=-6.370;QD=14.31;ReadPosRankSum=1.434;VQSLOD=2.7691;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:55.46:0,55,595	0/1:10,0:10:30.84:31,0,69	0/0:33,0:18:47.49:0,47,729	0/0:18,0:7:11.94:0,12,253	0/0:25,0:25:40.13:0,40,715	1/1:18,4:22:21.31:398,21,0	1/1:12,3:15:24.62:372,25,0	0/0:25,0:25:67.09:0,67,614	0/0:21,0:21:61.92:0,62,708	0/0:20,0:20:52.25:0,52,579	0/0:14,0:14:10.96:0,11,381	0/0:18,0:18:44.26:0,44,490	0/0:17,0:17:50.52:0,51,581	0/0:17,0:17:46.23:0,46,516	0/0:20,0:20:2.80:0,3,189	0/0:17,0:17:40.69:0,41,420	0/0:34,0:34:70.91:0,71,968	0/0:33,0:34:50.23:0,50,816	0/0:28,0:26:69.53:0,70,735	0/0:15,0:15:44.48:0,44,500	0/0:22,0:21:61.92:0,62,698	0/0:14,0:14:42.05:0,42,487	0/0:10,0:9:24.07:0,24,287	0/0:14,0:14:31.65:0,32,363	0/0:19,0:19:53.53:0,54,619	0/0:24,0:24:41.52:0,42,719	0/0:22,0:22:61.28:0,61,684	0/0:18,0:18:49.24:0,49,527
chr10	47094398	.	CA	C	12403.48	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-1.457;DP=549;FS=3.499;HRun=8;HaplotypeScore=79.9669;InbreedingCoeff=0.9792;MQ=58.96;MQ0=2;MQRankSum=-2.657;QD=24.71;ReadPosRankSum=4.578;VQSLOD=5.5110;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:11,13:22:32.26:320,32,0	1/1:0,10:10:30.05:289,30,0	0/0:30,0:17:35.97:0,36,370	0/0:17,0:8:11.96:0,12,137	1/1:2,22:24:60.09:579,60,0	1/1:7,15:22:51.06:481,51,0	1/1:5,10:15:39.04:364,39,0	1/1:2,21:23:63.06:599,63,0	1/1:1,20:21:60.05:571,60,0	1/1:3,17:20:51.08:492,51,0	1/1:2,12:14:33.05:318,33,0	1/1:1,16:17:48.08:463,48,0	1/1:0,17:17:51.08:492,51,0	1/1:2,15:17:42.06:406,42,0	1/1:0,19:19:57.09:550,57,0	1/1:0,16:16:45.07:434,45,0	1/1:6,28:34:84.13:810,84,0	1/1:4,26:30:73:696,73,0	1/1:5,20:23:20.93:485,21,0	1/1:1,14:15:42.07:406,42,0	1/1:1,21:21:63.10:608,63,0	1/1:3,10:13:30.04:290,30,0	1/1:0,9:8:24.04:232,24,0	1/1:2,11:13:30.04:290,30,0	1/1:0,19:19:54.09:522,54,0	1/1:1,22:23:66.10:637,66,0	1/1:1,21:22:60.09:579,60,0	1/1:0,18:18:51.08:492,51,0
chr10	47096250	.	G	GCT	3148.50	PASS	AB=0.745;AC=17;AF=0.354;AN=48;BaseQRankSum=11.206;DP=595;FS=29.537;HRun=0;HaplotypeScore=174.3543;InbreedingCoeff=-0.3504;MQ=40.76;MQ0=22;MQRankSum=-9.809;QD=9.18;ReadPosRankSum=0.445;VQSLOD=1.7429;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:22:15.03:0,15,199	0/0:6,0:5:6.02:0,6,92	./.	./.	0/1:4,1:5:0:0,0,0	0/1:7,2:10:93.95:94,0,209	0/0:48,0:36:28.19:0,28,900	./.	0/1:14,5:23:99:320,0,339	0/1:10,1:10:33.07:33,0,178	0/0:6,2:9:5.36:0,5,91	0/1:30,6:40:99:422,0,716	0/1:19,6:27:99:429,0,353	1/1:2,6:18:6.12:316,6,0	0/1:10,0:11:11.82:12,0,297	0/1:16,4:21:93.15:93,0,618	0/1:6,8:26:52.38:488,0,52	0/1:4,2:22:73.87:367,0,74	0/1:17,3:17:99:198,0,306	0/1:6,6:10:0:0,0,0	0/0:110,3:101:64.88:0,65,1480	0/0:4,0:3:3.01:0,3,46	0/0:4,0:3:3.01:0,3,46	0/1:33,6:42:19.41:19,0,886	0/0:12,7:19:2.99:0,3,46	0/1:10,2:13:99:147,0,163	0/1:14,11:25:99:346,0,445	./.
chr10	47096335	.	G	GCA	302.25	PASS	AB=0.854;AC=5;AF=0.100;AN=50;BaseQRankSum=6.566;DP=820;FS=28.078;HRun=0;HaplotypeScore=180.5426;InbreedingCoeff=-0.1195;MQ=47.19;MQ0=33;MQRankSum=-6.010;QD=1.61;ReadPosRankSum=-0.308;VQSLOD=1.2716;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:40,3:36:19.30:0,19,830	0/0:6,0:5:8.96:0,9,129	./.	./.	0/0:5,0:5:9.03:0,9,129	0/1:6,4:11:70.94:146,0,71	0/1:46,14:52:17.87:18,0,353	0/0:17,0:13:33.08:0,33,422	0/0:31,0:30:87.29:0,87,1245	0/0:17,0:11:24.07:0,24,327	0/0:11,0:9:24.06:0,24,325	0/0:63,0:62:99:0,162,2264	0/0:36,0:33:96.29:0,96,1347	0/1:37,5:41:99:164,0,1097	0/0:22,0:22:66.22:0,66,944	0/0:24,0:22:63.18:0,63,875	0/0:37,1:36:45.55:0,46,1306	0/0:27,1:26:15.54:0,16,884	0/1:32,0:13:43.55:44,0,273	0/0:12,0:9:15.05:0,15,215	0/0:137,0:125:99:0,215,3019	0/0:7,0:6:15.05:0,15,215	0/0:9,0:8:18.06:0,18,258	0/0:71,0:67:99:0,160,2276	0/0:11,1:11:21.07:0,21,301	0/0:23,0:17:42.13:0,42,586	0/1:37,0:41:44.71:45,0,1318	./.
chr10	47096491	.	TA	T	689.32	PASS	AB=0.803;AC=15;AF=0.268;AN=56;BaseQRankSum=-4.116;DP=548;FS=13.750;HRun=15;HaplotypeScore=107.6591;InbreedingCoeff=0.5435;MQ=76.01;MQ0=11;MQRankSum=1.811;QD=4.72;ReadPosRankSum=1.456;VQSLOD=0.8895;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:35:53.83:0,54,473	0/0:9,0:11:23.80:0,24,188	0/0:46,0:18:7.09:0,7,63	0/0:43,0:23:22.10:0,22,151	0/0:17,0:17:41.57:0,42,189	0/0:19,0:19:30.20:0,30,357	0/1:14,2:18:1.62:2,0,198	0/0:26,0:26:58.09:0,58,271	1/1:8,9:19:13.68:175,14,0	0/0:25,0:24:49.46:0,49,225	0/0:14,0:14:36.23:0,36,170	1/1:6,11:20:2.52:109,3,0	1/1:9,3:12:18.71:107,19,0	0/0:19,0:19:45.67:0,46,243	0/1:14,1:15:5.03:5,0,199	0/1:4,5:9:11.32:46,0,11	0/0:16,0:16:36.41:0,36,178	0/0:19,0:19:30.95:0,31,148	0/1:9,2:12:12.48:12,0,160	0/0:18,2:20:9.02:0,9,244	0/0:12,0:12:17.93:0,18,147	1/1:2,6:10:19.59:105,20,0	0/1:7,7:14:9.85:93,0,10	1/1:3,13:16:32.48:210,32,0	0/0:25,0:25:52.85:0,53,242	0/0:20,0:20:41.55:0,42,195	0/0:24,0:25:47.41:0,47,377	0/0:9,0:9:22.63:0,23,114
chr10	47096498	.	A	AC	1924.07	PASS	AB=0.748;AC=16;AF=0.286;AN=56;BaseQRankSum=10.328;DP=548;FS=0.388;HRun=0;HaplotypeScore=106.0478;InbreedingCoeff=0.6101;MQ=74.11;MQ0=11;MQRankSum=-2.184;QD=9.97;ReadPosRankSum=4.813;VQSLOD=4.0330;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:73.92:0,74,887	0/0:11,0:11:28.30:0,28,323	0/0:44,0:16:7.07:0,7,140	0/0:47,0:25:33.97:0,34,301	1/1:6,13:19:46.22:320,46,0	0/0:20,0:20:56.12:0,56,649	0/0:17,0:17:46.48:0,46,465	0/1:18,11:29:60.90:189,0,61	0/0:19,0:19:56.96:0,57,499	1/1:9,13:21:37.10:317,37,0	1/1:5,9:14:23.48:178,23,0	0/0:19,0:19:41.94:0,42,364	0/0:10,0:10:26.98:0,27,245	0/1:13,5:19:53.65:138,0,54	0/0:12,0:12:36.08:0,36,451	0/0:9,0:9:17.99:0,18,152	1/1:6,8:14:9.99:192,10,0	1/1:12,8:20:15.93:214,16,0	0/0:19,0:18:46.59:0,47,479	0/0:20,0:19:53.73:0,54,527	0/0:10,0:10:30.05:0,30,332	0/0:11,0:11:32.82:0,33,258	0/0:12,0:12:32.88:0,33,288	0/0:15,0:15:35.97:0,36,301	1/1:11,13:24:7.98:328,8,0	0/1:15,5:20:40.06:153,0,40	0/0:26,0:26:68.34:0,68,775	0/1:7,5:12:34.34:83,0,34
chr10	47096504	.	A	AAG	4227.95	PASS	AB=0.723;AC=17;AF=0.304;AN=56;BaseQRankSum=12.242;DP=549;FS=15.118;HRun=0;HaplotypeScore=111.3718;InbreedingCoeff=0.6968;MQ=70.13;MQ0=11;MQRankSum=-1.661;QD=20.73;ReadPosRankSum=2.961;VQSLOD=4.5126;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:68.98:0,69,795	0/0:10,0:10:26.96:0,27,297	0/0:39,0:13:14.26:0,14,144	0/0:41,0:20:20.35:0,20,198	1/1:7,12:19:44.72:536,45,0	0/0:20,0:20:36.33:0,36,563	0/0:15,0:15:42.98:0,43,425	0/1:18,11:29:32:489,0,32	0/0:18,0:18:23.58:0,24,278	1/1:10,13:22:20.04:561,20,0	1/1:5,9:14:24.14:394,24,0	0/0:20,0:20:41.81:0,42,334	0/0:13,0:13:11.96:0,12,193	0/1:15,5:21:79.17:266,0,79	0/0:14,0:14:36.05:0,36,405	0/0:10,0:10:20.95:0,21,175	0/1:8,8:16:27.59:328,0,28	1/1:12,8:21:17.17:367,17,0	0/0:21,0:20:59.63:0,60,546	0/0:18,0:18:46.43:0,46,444	0/0:9,0:9:24.04:0,24,258	0/0:11,0:11:10.12:0,10,181	0/0:12,0:12:29.27:0,29,238	0/0:15,0:15:33.32:0,33,251	1/1:9,12:21:34.14:561,34,0	1/1:16,5:21:9.48:402,9,0	0/0:25,0:25:63.23:0,63,674	1/1:14,5:19:5.34:325,5,0
chr10	47096602	.	CAA	C	2277.97	PASS	AB=0.667;AC=25;AF=0.446;AN=56;BaseQRankSum=6.306;DP=528;FS=0.000;HRun=15;HaplotypeScore=79.3935;InbreedingCoeff=0.9145;MQ=67.47;MQ0=8;MQRankSum=1.529;QD=11.17;ReadPosRankSum=5.698;VQSLOD=2.5050;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:28:56.90:0,57,687	0/0:7,0:9:21.01:0,21,251	0/0:42,0:17:24.02:0,24,240	0/0:26,0:7:13.12:0,13,106	0/0:19,0:20:26.55:0,27,316	1/1:2,0:18:35.09:149,35,0	1/1:4,0:24:46.61:201,47,0	0/0:11,0:13:26.14:0,26,278	1/1:3,11:15:26.52:267,27,0	0/0:17,0:18:32.55:0,33,381	0/0:13,0:13:18.21:0,18,234	1/1:3,8:11:17.83:158,18,0	1/1:6,7:14:18.80:160,19,0	0/0:14,0:14:32.59:0,33,415	0/0:16,0:16:33.09:0,33,426	1/1:2,9:12:17.39:144,17,0	0/0:32,0:32:87.25:0,87,1133	0/0:24,0:26:40.86:0,41,687	1/1:9,13:24:17.66:242,18,0	0/1:9,8:18:17.27:139,0,17	1/1:1,8:10:14.84:176,15,0	1/1:5,10:15:23.81:211,24,0	1/1:4,6:10:17.93:158,18,0	1/1:1,13:15:29.69:250,30,0	0/0:17,0:21:46.48:0,46,524	0/0:16,0:18:32.54:0,33,341	1/1:1,16:18:29.13:248,29,0	0/0:23,0:24:35.60:0,36,454
chr10	47096957	.	T	TGTGCCGGGAGAG	24891.44	PASS	AB=0.714;AC=19;AF=0.339;AN=56;BaseQRankSum=16.699;DP=752;FS=1.806;HRun=0;HaplotypeScore=268.4863;InbreedingCoeff=0.9208;MQ=89.91;MQ0=0;MQRankSum=-17.487;QD=120.83;ReadPosRankSum=0.484;VQSLOD=4.6452;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,163,6195	0/0:11,0:11:33.11:0,33,1234	0/0:36,0:36:96.19:0,96,2965	0/0:29,0:29:75.26:0,75,2494	1/1:9,20:29:45.06:3316,45,0	0/0:28,0:28:84.29:0,84,3243	0/0:35,0:35:99:0,105,3575	1/1:27,6:33:33.34:3357,33,0	0/0:28,0:28:84.27:0,84,3108	1/1:8,11:19:29.93:2707,30,0	1/1:8,11:20:42.14:2235,42,0	0/0:34,0:34:96.33:0,96,3552	0/0:33,0:33:96.33:0,96,3731	1/1:11,18:30:63.22:3354,63,0	0/0:35,0:35:99:0,105,3885	0/0:31,0:31:93.31:0,93,3385	1/1:8,4:12:28.61:1202,29,0	1/1:3,5:8:21.04:959,21,0	0/0:25,0:25:75.26:0,75,2813	0/0:30,0:30:84.27:0,84,3231	0/0:32,0:32:90.29:0,90,3468	0/0:20,0:20:60.21:0,60,2255	0/0:15,0:15:42.14:0,42,1660	0/0:25,0:25:75.16:0,75,2560	1/1:5,10:15:42.14:2101,42,0	1/1:8,22:30:90.09:4707,90,0	0/0:44,0:44:99:0,132,5018	0/1:6,4:10:17.62:953,0,18
chr10	47096959	.	T	TCC	5996.79	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=17.594;DP=753;FS=2.255;HRun=1;HaplotypeScore=174.0481;InbreedingCoeff=0.9989;MQ=89.89;MQ0=0;MQRankSum=-17.255;QD=28.97;ReadPosRankSum=0.525;VQSLOD=4.6519;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,157,2387	0/0:12,0:12:30.10:0,30,459	0/0:35,0:35:99:0,102,1407	0/0:30,0:30:68.17:0,68,1010	1/1:10,20:30:62.84:745,63,0	0/0:29,0:29:87.28:0,87,1310	0/0:34,0:34:99:0,99,1449	1/1:27,6:33:95.99:1007,96,0	0/0:27,0:27:81.28:0,81,1240	1/1:8,11:19:51.08:604,51,0	1/1:8,12:20:39.11:489,39,0	0/0:34,0:34:99:0,102,1477	0/0:34,0:34:99:0,99,1473	1/1:11,19:30:60.19:779,60,0	0/0:35,0:35:99:0,105,1607	0/0:32,0:32:96.31:0,96,1447	1/1:6,4:10:23.93:245,24,0	1/1:3,5:8:21.04:260,21,0	0/0:26,0:26:78.25:0,78,1169	0/0:30,0:30:87.27:0,87,1290	0/0:30,0:30:87.30:0,87,1332	0/0:20,0:20:60.20:0,60,918	0/0:15,0:15:45.14:0,45,669	0/0:24,0:24:72.23:0,72,1076	1/1:6,10:16:41.99:469,42,0	1/1:9,22:31:88.44:1096,88,0	0/0:44,0:44:99:0,132,1998	1/1:6,4:10:29.94:303,30,0
chr10	47098683	.	T	TGGAGGTCA	58744.85	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-7.759;DP=690;FS=7.378;HRun=0;HaplotypeScore=166.2692;InbreedingCoeff=0.9735;MQ=81.83;MQ0=3;MQRankSum=-15.365;QD=100.59;ReadPosRankSum=5.434;VQSLOD=5.5100;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,23:36:75.26:3293,75,0	1/1:5,3:8:14.79:643,15,0	0/0:34,0:35:98.81:0,99,2319	0/0:25,0:25:64.90:0,65,1572	1/1:3,10:13:21.07:932,21,0	0/0:20,0:20:57.18:0,57,1473	0/0:26,0:26:78.27:0,78,2099	1/1:15,13:32:81.24:2916,81,0	1/1:5,16:23:54.19:2321,54,0	1/1:13,16:29:84.25:3297,84,0	1/1:1,3:6:9.03:401,9,0	1/1:13,26:42:99:4360,102,0	1/1:9,24:35:96.25:3899,96,0	1/1:9,23:34:99:4221,99,0	1/1:6,36:46:99:5374,123,0	1/1:11,20:34:90.31:3809,90,0	1/1:5,11:19:45.15:1967,45,0	1/1:5,8:13:36.12:1484,36,0	1/1:11,8:19:47.60:1913,48,0	1/1:8,18:29:69.24:2969,69,0	1/1:16,14:33:54.18:2222,54,0	1/1:6,17:22:51.17:2157,51,0	1/1:5,5:11:27.09:1151,27,0	1/1:7,12:19:33.11:1420,33,0	1/1:4,8:13:30.10:1150,30,0	1/1:12,16:32:87.26:3440,87,0	1/1:6,18:26:66.23:2850,66,0	1/1:2,3:5:15.05:556,15,0
chr10	47098867	.	CT	C	1121.81	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=9.589;DP=659;FS=5.249;HRun=1;HaplotypeScore=78.0384;InbreedingCoeff=0.9929;MQ=73.59;MQ0=0;MQRankSum=-2.191;QD=25.50;ReadPosRankSum=-0.031;VQSLOD=3.3331;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,36:44:99:1217,105,0	0/0:9,0:9:27.09:0,27,431	0/0:17,0:17:39.08:0,39,531	0/0:11,0:11:26.91:0,27,311	0/0:23,0:23:60.20:0,60,959	0/0:22,0:22:66.21:0,66,1030	0/0:25,0:25:72.20:0,72,1078	0/0:28,0:28:75.24:0,75,1155	0/0:18,0:18:54.17:0,54,840	0/0:20,0:20:60.20:0,60,938	0/0:7,0:7:21.07:0,21,336	0/0:42,0:42:99:0,120,1910	0/0:32,0:32:84.27:0,84,1304	0/0:31,0:31:93.32:0,93,1480	0/0:21,0:21:57.19:0,57,909	0/0:31,0:31:93.27:0,93,1456	0/0:22,0:22:66.20:0,66,1025	0/0:25,0:25:75.23:0,75,1165	0/0:17,0:17:51.08:0,51,717	0/0:16,0:16:48.15:0,48,741	0/0:42,0:42:99:0,126,1990	0/0:16,0:16:45.15:0,45,719	0/0:18,0:18:54.16:0,54,838	0/0:30,0:30:87.25:0,87,1359	0/0:23,0:23:66.22:0,66,1050	0/0:30,0:30:90.29:0,90,1396	0/0:30,0:29:90.31:0,90,1436	0/0:9,0:9:27.09:0,27,431
chr10	47102221	.	A	AC	31791.47	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-9.451;DP=757;FS=13.857;HRun=0;HaplotypeScore=65.3382;InbreedingCoeff=0.9998;MQ=84.53;MQ0=0;MQRankSum=-11.000;QD=44.65;ReadPosRankSum=6.273;VQSLOD=3.2898;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,33:33:87.30:1391,87,0	1/1:1,11:12:33.11:527,33,0	0/0:21,0:21:63.08:0,63,806	0/0:24,0:24:65.83:0,66,806	1/1:1,26:27:75.26:1197,75,0	1/1:1,24:25:66.22:1055,66,0	1/1:1,25:26:72.25:1151,72,0	1/1:0,34:34:99:1604,102,0	1/1:1,25:26:69.24:1103,69,0	1/1:0,25:25:72.25:1147,72,0	1/1:0,16:16:48.16:767,48,0	1/1:0,30:30:87.30:1386,87,0	1/1:0,32:32:87.29:1388,87,0	1/1:0,34:34:99:1583,99,0	1/1:0,45:45:99:1966,123,0	1/1:1,27:28:72.25:1151,72,0	1/1:0,26:26:72.24:1140,72,0	1/1:0,20:20:54.18:863,54,0	1/1:0,20:20:60.18:914,60,0	1/1:0,28:28:84.29:1341,84,0	1/1:2,40:42:99:1919,120,0	1/1:0,27:27:72.25:1151,72,0	1/1:0,26:26:66.02:1054,66,0	1/1:0,35:35:93.32:1487,93,0	1/1:0,25:24:75.26:1199,75,0	1/1:0,28:28:84.29:1343,84,0	1/1:0,28:27:81.28:1294,81,0	1/1:0,14:14:42.14:671,42,0
chr10	47102488	.	TGGAGGAGGA	T	1885.63	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.848;DP=796;FS=8.161;HRun=0;HaplotypeScore=212.1470;InbreedingCoeff=0.9960;MQ=88.05;MQ0=0;MQRankSum=-7.580;QD=52.38;ReadPosRankSum=-0.881;VQSLOD=2.3909;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,33:36:69.24:1981,69,0	0/0:17,0:17:45.15:0,45,2091	0/0:40,0:40:99:0,100,4495	0/0:26,0:26:62.83:0,63,2392	0/0:23,0:23:66.23:0,66,3003	0/0:31,0:31:84.29:0,84,3728	0/0:33,0:33:90.31:0,90,4163	0/0:31,0:31:81.27:0,81,3561	0/0:31,0:31:90.31:0,90,4300	0/0:27,0:27:75.26:0,75,3437	0/0:25,0:25:69.24:0,69,3131	0/0:32,0:32:84.27:0,84,3851	0/0:24,0:24:72.21:0,72,3216	0/0:22,0:22:66.23:0,66,2919	0/0:26,0:26:69.24:0,69,3287	0/0:26,0:26:69.24:0,69,3172	0/0:33,0:33:99:0,99,4437	0/0:23,0:23:54.19:0,54,2497	0/0:24,0:24:63.21:0,63,2766	0/0:40,0:40:99:0,105,4658	0/0:55,0:55:99:0,157,7123	0/0:23,0:23:63.21:0,63,2863	0/0:26,0:26:75.26:0,75,3515	0/0:29,0:28:84.26:0,84,3787	0/0:30,0:30:87.30:0,87,3994	0/0:29,0:29:84.29:0,84,3931	0/0:27,0:25:78.27:0,78,3588	0/0:7,0:7:21.07:0,21,1009
chr10	47104703	.	G	GTT	8144.79	PASS	AB=0.538;AC=43;AF=0.768;AN=56;BaseQRankSum=-11.010;DP=732;FS=10.138;HRun=11;HaplotypeScore=121.7670;InbreedingCoeff=0.8451;MQ=69.46;MQ0=3;MQRankSum=-0.417;QD=14.14;ReadPosRankSum=1.179;VQSLOD=2.4848;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,32:36:68.20:929,68,0	1/1:2,12:14:21.07:304,21,0	0/0:19,0:16:13.79:0,14,98	0/0:19,0:12:1.14:0,1,78	1/1:30,0:30:73.65:658,74,0	0/1:4,0:28:19.75:73,0,20	1/1:7,0:29:31.41:115,31,0	1/1:34,0:34:80.12:672,80,0	1/1:1,0:26:49.07:175,49,0	1/1:27,0:27:53.97:478,54,0	1/1:22,0:22:42.44:476,42,0	1/1:5,0:26:30.52:115,31,0	1/1:12,0:36:21.53:148,22,0	1/1:27,0:27:51.34:514,51,0	1/1:7,32:40:63.68:899,64,0	1/1:5,1:37:45.33:189,45,0	1/1:23,0:23:46.31:431,46,0	1/1:16,0:16:15.85:195,16,0	0/0:31,0:31:53.15:0,53,237	0/0:26,0:26:46.48:0,46,182	0/0:26,0:26:37.61:0,38,144	1/1:1,0:17:30.29:114,30,0	1/1:3,0:18:30.53:105,31,0	1/1:4,1:24:38.42:174,38,0	1/1:21,0:21:31.34:349,31,0	1/1:25,0:25:57.35:483,57,0	0/0:30,0:31:57.34:0,57,208	1/1:19,0:19:57.09:549,57,0
chr10	47104714	.	T	TTA	11610.21	PASS	AB=1.000;AC=33;AF=0.589;AN=56;BaseQRankSum=-12.071;DP=695;FS=7.994;HRun=0;HaplotypeScore=105.3823;InbreedingCoeff=0.8014;MQ=72.93;MQ0=2;MQRankSum=0.345;QD=25.80;ReadPosRankSum=1.183;VQSLOD=6.0108;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:37,0:37:26.80:311,0,27	1/1:9,0:9:6.52:105,7,0	0/0:14,0:13:12.33:0,12,159	0/1:18,0:13:0.38:0,0,150	1/1:2,28:34:79.22:1178,79,0	0/0:29,0:29:49.43:0,49,290	0/0:24,0:24:31.49:0,31,162	1/1:2,29:33:93.22:1471,93,0	0/0:28,0:28:55.70:0,56,218	1/1:0,21:22:66.17:1051,66,0	1/1:0,17:20:59.99:943,60,0	0/0:23,0:23:16.43:0,16,138	0/0:29,0:29:58.22:0,58,288	1/1:1,24:30:57.09:950,57,0	0/1:36,0:36:7.83:286,0,8	0/0:32,0:32:36.60:0,37,213	1/1:1,21:23:48.16:849,48,0	1/1:0,13:14:23.97:392,24,0	1/1:4,0:27:53.55:395,54,0	1/1:2,0:25:43.14:316,43,0	1/1:2,0:20:29.49:239,29,0	0/0:21,0:21:25.03:0,25,186	0/0:23,0:23:34.02:0,34,190	0/0:22,0:22:12.13:0,12,88	1/1:0,22:25:42.04:699,42,0	1/1:1,22:25:48.72:1006,49,0	1/1:2,0:30:58.07:397,58,0	1/1:0,19:20:57.20:1021,57,0
chr10	47105449	.	TG	T	512.53	PASS	AB=0.990;AC=6;AF=0.107;AN=56;BaseQRankSum=4.550;DP=613;FS=7.514;HRun=1;HaplotypeScore=119.7382;InbreedingCoeff=0.6299;MQ=67.85;MQ0=9;MQRankSum=-3.361;QD=5.18;ReadPosRankSum=-2.458;VQSLOD=-0.6673;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:28.27:0,28,274	1/1:2,8:10:30.03:287,30,0	0/0:51,0:13:17.14:0,17,176	0/1:49,1:21:0.30:0,0,87	0/1:26,0:26:5.11:5,0,142	0/0:19,0:19:25.75:0,26,110	0/0:15,0:14:25.60:0,26,148	0/0:22,0:22:43.71:0,44,234	0/0:8,1:9:3.04:0,3,185	0/0:29,0:28:51.40:0,51,363	0/0:32,0:32:5.36:0,5,180	0/0:9,0:9:25.42:0,25,220	0/0:14,0:14:31.47:0,31,268	0/0:14,0:14:21.98:0,22,122	1/1:3,9:12:36.02:344,36,0	0/0:11,0:11:23.16:0,23,189	0/0:31,0:31:57:0,57,255	0/0:18,0:18:22.09:0,22,141	0/0:23,0:23:45.42:0,45,289	0/0:21,0:21:32.23:0,32,192	0/0:8,0:8:11.17:0,11,67	0/0:15,0:15:41.53:0,42,336	0/0:23,0:23:51.24:0,51,533	0/0:18,0:17:47.77:0,48,432	0/0:27,0:27:46.19:0,46,182	0/0:30,0:30:36.34:0,36,323	0/0:28,0:28:50.72:0,51,270	0/0:9,0:9:18.05:0,18,71
chr10	47105450	.	GTTTT	G	7864.41	PASS	AB=0.780;AC=34;AF=0.607;AN=56;BaseQRankSum=0.737;DP=616;FS=1.791;HRun=14;HaplotypeScore=124.5607;InbreedingCoeff=0.8021;MQ=69.93;MQ0=9;MQRankSum=-2.026;QD=20.32;ReadPosRankSum=5.315;VQSLOD=3.4272;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,2:37:17.61:132,18,0	0/1:10,0:10:6.60:152,0,7	0/0:53,0:15:22.91:0,23,182	0/0:52,0:22:19.23:0,19,270	1/1:2,24:26:68.99:882,69,0	1/1:1,18:19:33.09:467,33,0	1/1:4,10:13:27.06:381,27,0	1/1:5,16:22:39.61:602,40,0	0/0:8,0:9:18.04:0,18,289	1/1:6,21:28:65.89:803,66,0	1/1:4,28:32:77.96:988,78,0	0/0:8,0:9:27.08:0,27,550	0/0:16,0:16:42.11:0,42,736	1/1:4,10:14:10.97:204,11,0	1/1:12,0:12:12.08:187,12,0	0/0:5,0:11:30.09:0,30,522	1/1:4,26:31:53.73:764,54,0	1/1:5,12:17:23.21:304,23,0	1/1:7,1:22:20.90:114,21,0	0/0:2,0:21:3.10:0,3,95	1/1:2,0:8:2.48:6,2,0	0/0:13,0:15:42.08:0,42,713	0/0:20,0:24:60.07:0,60,970	0/0:19,0:18:42.07:0,42,815	1/1:0,25:27:55.40:740,55,0	1/1:7,22:30:67.62:858,68,0	0/1:6,0:28:17.90:23,0,18	1/1:0,8:9:19.31:258,19,0
chr10	47105452	.	TTTTTTTTTTTTTG	T	1428.16	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.899;DP=609;FS=1.712;HRun=0;HaplotypeScore=234.6136;InbreedingCoeff=0.9406;MQ=70.63;MQ0=9;MQRankSum=-4.642;QD=64.92;ReadPosRankSum=0.988;VQSLOD=3.4000;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:87.12:0,87,2937	1/1:2,8:10:25.12:727,25,0	0/0:57,0:16:26.89:0,27,504	0/0:51,0:22:35.04:0,35,600	0/0:26,0:26:78.20:0,78,2324	0/0:19,0:19:36.11:0,36,1153	0/0:14,0:13:27.09:0,27,921	0/0:22,0:22:57.18:0,57,1593	0/0:8,0:8:24.06:0,24,766	0/0:29,0:28:78.20:0,78,2129	0/0:31,0:31:84.24:0,84,2656	0/0:9,0:9:27.08:0,27,1289	0/0:16,0:16:42.14:0,42,1955	0/0:13,0:13:21.05:0,21,560	1/1:3,9:12:29.01:822,29,0	0/0:11,0:11:30.10:0,30,1651	0/0:30,0:30:66.08:0,66,2029	0/0:17,0:17:33.05:0,33,845	0/0:21,0:21:60.17:0,60,1988	0/0:20,0:20:60.16:0,60,1914	0/0:7,0:7:6.02:0,6,246	0/0:15,0:15:45.08:0,45,1855	0/0:23,0:23:66.14:0,66,2987	0/0:20,0:19:51.13:0,51,2225	0/0:27,0:27:57.20:0,57,1883	0/0:29,0:29:78.24:0,78,2280	0/0:26,0:26:57.86:0,58,2178	0/0:9,0:9:21.07:0,21,738
chr10	47106275	.	A	AT	10934.95	PASS	AB=0.556;AC=49;AF=0.875;AN=56;BaseQRankSum=-6.536;DP=475;FS=9.866;HRun=9;HaplotypeScore=49.9067;InbreedingCoeff=0.7830;MQ=69.58;MQ0=0;MQRankSum=0.334;QD=25.20;ReadPosRankSum=0.588;VQSLOD=5.1558;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:74.97:0,75,651	1/1:3,10:13:24.06:265,24,0	0/0:6,0:6:11.84:0,12,91	0/0:7,0:7:9.78:0,10,69	1/1:7,25:33:31.91:778,32,0	1/1:2,16:18:48.12:524,48,0	1/1:2,7:10:17.88:180,18,0	1/1:6,17:23:48.13:531,48,0	1/1:4,15:19:22.07:472,22,0	1/1:4,19:23:54.15:597,54,0	1/1:4,22:26:49.17:767,49,0	1/1:0,11:11:33.09:365,33,0	1/1:0,9:9:18.05:199,18,0	1/1:0,5:5:12.03:133,12,0	1/1:3,11:14:35.89:378,36,0	1/1:3,15:18:19.07:439,19,0	1/1:2,17:19:48.09:518,48,0	1/1:5,20:25:31.11:571,31,0	1/1:2,19:21:57.02:612,57,0	1/1:1,11:12:30.08:332,30,0	1/1:0,4:4:12.03:133,12,0	1/1:2,13:15:36.10:398,36,0	1/1:0,16:16:42.11:465,42,0	0/1:2,8:10:5:178,0,5	1/1:5,22:27:5.04:512,5,0	1/1:7,24:32:28.94:759,29,0	1/1:0,19:19:42.11:465,42,0	1/1:1,11:12:33.09:365,33,0
chr10	47108289	.	ATT	A	406.71	PASS	AB=0.944;AC=6;AF=0.107;AN=56;BaseQRankSum=-6.190;DP=511;FS=0.761;HRun=12;HaplotypeScore=111.3416;InbreedingCoeff=0.6146;MQ=75.95;MQ0=0;MQRankSum=1.553;QD=6.46;ReadPosRankSum=0.168;VQSLOD=0.9847;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:62.75:0,63,487	1/1:1,6:7:12.33:175,12,0	0/1:21,1:20:23.61:24,0,257	0/1:11,0:10:13.28:13,0,117	0/0:25,0:24:62.16:0,62,475	0/0:22,0:22:53.41:0,53,406	0/0:22,0:22:53.79:0,54,418	0/0:35,0:35:74.57:0,75,576	0/0:14,0:14:30.03:0,30,293	0/0:29,0:29:70.75:0,71,520	0/0:10,0:10:26.28:0,26,193	0/0:17,0:17:26.97:0,27,240	0/0:23,0:23:39.03:0,39,358	0/0:17,0:17:41.86:0,42,330	1/1:5,14:20:26.77:327,27,0	0/0:16,0:16:29.97:0,30,263	0/0:17,0:17:47.86:0,48,390	0/0:11,0:11:29.89:0,30,233	0/0:20,0:20:40.70:0,41,363	0/0:26,0:26:56.77:0,57,453	0/0:9,0:9:23.91:0,24,187	0/0:12,0:12:23.18:0,23,203	0/0:7,0:7:21.01:0,21,193	0/0:13,0:13:21.02:0,21,193	0/0:13,0:13:26.91:0,27,212	0/0:27,0:27:49.18:0,49,419	0/0:23,0:23:56.79:0,57,443	0/0:15,0:15:44.83:0,45,350
chr10	47108290	.	T	TTTA	6554.19	PASS	AB=0.538;AC=47;AF=0.839;AN=56;BaseQRankSum=-6.166;DP=515;FS=5.114;HRun=0;HaplotypeScore=104.1237;InbreedingCoeff=0.8243;MQ=76.70;MQ0=0;MQRankSum=-4.197;QD=14.53;ReadPosRankSum=3.064;VQSLOD=4.4736;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:25:61.06:249,61,0	0/0:7,0:7:12.60:0,13,191	0/0:24,0:20:38.34:0,38,434	0/0:13,0:11:20.59:0,21,181	1/1:25,0:24:56.06:210,56,0	1/1:22,0:22:42.53:142,43,0	1/1:22,0:22:43.09:150,43,0	1/1:35,0:35:69.84:460,70,0	0/1:2,12:14:0.25:518,0,0	1/1:30,0:30:65.69:277,66,0	1/1:10,0:10:9.24:73,9,0	1/1:2,15:17:27.08:523,27,0	1/1:1,22:23:39.13:793,39,0	1/1:17,0:17:19.08:87,19,0	0/0:20,0:20:48.11:0,48,504	1/1:2,14:16:29.97:528,30,0	1/1:17,0:17:0.07:71,0,0	1/1:12,0:12:23.71:79,24,0	1/1:21,0:21:42.14:219,42,0	1/1:26,0:26:49.27:223,49,0	1/1:9,0:9:19.50:71,20,0	1/1:1,11:12:26.91:453,27,0	1/1:0,7:7:21.07:426,21,0	1/1:2,12:14:21.06:427,21,0	1/1:13,0:13:8.33:50,8,0	1/1:26,0:26:60.65:257,61,0	1/1:23,0:23:44.91:149,45,0	1/1:15,0:15:35.57:118,36,0
chr10	47108292	.	T	TA	12517.40	PASS	AB=0.958;AC=47;AF=0.839;AN=56;BaseQRankSum=-8.497;DP=526;FS=5.156;HRun=0;HaplotypeScore=63.7288;InbreedingCoeff=0.5971;MQ=80.77;MQ0=0;MQRankSum=-4.602;QD=27.09;ReadPosRankSum=3.154;VQSLOD=5.6550;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,20:25:72.07:876,72,0	0/1:6,1:7:18.86:19,0,103	0/0:29,0:25:42.20:0,42,443	0/0:16,0:14:23.59:0,24,207	1/1:0,24:24:69.09:870,69,0	1/1:1,22:23:54.16:716,54,0	1/1:0,22:22:54.18:716,54,0	1/1:2,36:38:99:1239,110,0	0/1:14,0:14:12.74:104,0,13	1/1:1,28:29:83.68:1004,84,0	1/1:1,9:10:26.13:278,26,0	1/1:14,1:15:25.98:153,26,0	1/1:21,0:21:37.38:193,37,0	1/1:1,18:19:37.54:514,38,0	0/0:19,0:19:47.73:0,48,358	1/1:16,0:16:28.69:150,29,0	1/1:2,15:17:31.59:542,32,0	1/1:0,12:12:30.10:398,30,0	1/1:0,21:21:63.06:731,63,0	1/1:0,26:27:71.81:816,72,0	1/1:0,9:9:24.08:318,24,0	1/1:12,0:12:9.31:137,9,0	1/1:7,0:7:20.13:103,20,0	0/1:14,0:14:21.52:78,0,22	1/1:2,12:14:23.06:317,23,0	1/1:0,25:25:74.39:893,74,0	1/1:1,24:25:57.18:756,57,0	1/1:0,15:15:45.15:597,45,0
chr10	47108478	.	A	AT	9314.04	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-10.350;DP=507;FS=0.000;HRun=8;HaplotypeScore=50.0189;InbreedingCoeff=0.9904;MQ=74.23;MQ0=1;MQRankSum=-0.946;QD=26.76;ReadPosRankSum=-3.453;VQSLOD=3.9562;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,21:21:54.13:609,54,0	0/0:7,0:7:18.01:0,18,165	0/0:11,0:11:20.96:0,21,181	0/0:8,0:8:20.91:0,21,172	1/1:3,24:27:66.11:733,66,0	1/1:23,0:23:62.23:416,62,0	1/1:12,0:12:20.47:136,20,0	1/1:6,25:31:47.73:785,48,0	0/0:21,0:21:57.02:0,57,522	1/1:2,26:28:75.22:865,75,0	1/1:2,15:17:42.08:470,42,0	0/0:24,0:24:60.03:0,60,549	0/0:20,0:20:57.03:0,57,519	1/1:3,14:17:36.11:415,36,0	0/0:19,0:19:54.01:0,54,490	0/0:16,0:16:33.01:0,33,302	1/1:3,22:25:14.27:672,14,0	1/1:3,13:16:36.11:415,36,0	1/1:3,7:9:21.05:231,21,0	1/1:1,19:20:57.17:658,57,0	1/1:5,9:14:24.07:277,24,0	0/0:12,0:12:36.02:0,36,329	0/0:13,0:13:33.01:0,33,302	0/0:8,0:8:20.99:0,21,186	1/1:3,19:22:51.15:589,51,0	1/1:2,25:27:75.22:866,75,0	1/1:1,31:32:87.26:1004,87,0	1/1:1,5:6:15.04:173,15,0
chr10	47108480	.	T	TG	2520.10	PASS	AB=1.000;AC=27;AF=0.482;AN=56;BaseQRankSum=9.490;DP=513;FS=0.720;HRun=0;HaplotypeScore=73.5263;InbreedingCoeff=0.4601;MQ=74.88;MQ0=1;MQRankSum=-1.932;QD=7.10;ReadPosRankSum=2.103;VQSLOD=3.3305;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:21:41.66:141,42,0	0/0:7,0:7:21.06:0,21,277	0/0:12,0:12:30:0,30,367	0/0:8,0:8:20.77:0,21,235	1/1:27,0:27:7.33:122,7,0	1/1:0,22:22:63.21:921,63,0	1/1:0,13:13:20.82:307,21,0	0/1:32,0:32:99:100,0,111	0/0:22,0:22:63.19:0,63,849	1/1:27,0:27:12.71:134,13,0	0/1:18,0:18:15.06:76,0,15	0/0:21,0:21:60.20:0,60,835	0/0:20,0:20:57.19:0,57,794	1/1:16,0:16:4.36:79,4,0	0/0:19,0:19:57.18:0,57,780	0/0:15,0:15:42.11:0,42,540	0/1:27,0:27:69.65:127,0,70	1/1:17,0:17:32.09:139,32,0	0/1:10,0:9:29.04:29,0,33	1/1:20,0:20:23.87:128,24,0	0/1:14,0:14:30.65:31,0,98	0/0:12,0:12:36.12:0,36,503	0/0:14,0:14:42.11:0,42,539	0/0:8,0:8:24.07:0,24,318	0/1:23,0:23:62.93:65,0,63	1/1:28,0:28:6.64:115,7,0	1/1:34,0:34:26.68:188,27,0	0/1:6,0:6:8.75:25,0,9
chr10	47109024	.	AGTGTGTGT	A	1419.50	PASS	AC=14;AF=0.269;AN=52;BaseQRankSum=3.170;DP=583;FS=11.776;HRun=0;HaplotypeScore=151.5601;InbreedingCoeff=0.7692;MQ=62.11;MQ0=15;MQRankSum=-6.781;QD=10.14;ReadPosRankSum=-0.279;VQSLOD=1.7945;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:26.98:0,27,682	0/0:4,0:4:6.02:0,6,122	./.	./.	0/0:20,0:25:26.98:0,27,757	0/0:25,0:25:27.09:0,27,807	0/0:19,0:19:10.22:0,10,278	0/0:23,0:21:2.22:0,2,7	1/1:13,9:23:12.04:279,12,0	0/0:19,0:23:33.11:0,33,876	0/0:11,0:11:15.05:0,15,386	1/1:11,5:16:12.03:252,12,0	1/1:10,7:17:12.02:243,12,0	0/0:14,0:17:8.92:0,9,270	0/0:23,0:23:18.06:0,18,560	1/1:15,4:20:11.93:202,12,0	0/0:15,0:20:33.11:0,33,963	0/0:11,0:12:21.07:0,21,608	0/0:18,0:17:3.01:0,3,119	0/0:13,0:13:3:0,3,25	0/0:36,0:33:20.84:0,21,595	1/1:12,5:19:18.06:392,18,0	1/1:16,1:17:3.01:74,3,0	1/1:19,9:27:6.21:149,6,0	0/0:13,0:19:9.03:0,9,280	0/0:23,0:22:24.08:0,24,612	0/0:25,0:25:24.08:0,24,619	0/0:7,0:9:9.03:0,9,242
chr10	47109030	.	T	TGTGC	418.05	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=4.586;DP=569;FS=0.916;HRun=0;HaplotypeScore=123.4959;InbreedingCoeff=0.8239;MQ=53.71;MQ0=17;MQRankSum=-0.326;QD=14.42;ReadPosRankSum=1.687;VQSLOD=3.4840;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:39.58:0,40,396	1/1:4,0:4:9:106,9,0	0/0:28,0:15:33.05:0,33,339	0/0:23,0:12:26.22:0,26,288	0/0:25,0:24:40.46:0,40,344	0/0:23,0:23:49.70:0,50,420	0/0:18,0:18:32.85:0,33,289	0/0:23,0:21:53.79:0,54,470	0/0:20,0:20:35.98:0,36,323	0/0:22,0:22:44.11:0,44,455	0/0:12,0:12:21.31:0,21,162	0/0:17,0:17:27.05:0,27,277	0/0:15,0:15:26.31:0,26,224	0/0:16,0:15:24.70:0,25,197	1/1:6,18:25:3.42:412,3,0	0/0:18,0:18:38.94:0,39,343	0/0:22,0:20:37.91:0,38,363	0/0:14,0:14:34.64:0,35,259	0/0:20,0:19:44.62:0,45,348	0/0:15,0:14:14.69:0,15,117	0/0:39,0:35:13.99:0,14,331	0/0:18,0:18:50.85:0,51,445	0/0:15,0:15:38.95:0,39,329	0/0:28,0:27:26.92:0,27,233	0/0:19,0:19:22.68:0,23,174	0/0:24,0:23:62.81:0,63,531	0/0:23,0:23:28.55:0,29,232	0/0:7,0:7:9.80:0,10,74
chr10	47109397	.	A	ATGTG	1681.73	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=-4.864;DP=636;FS=0.755;HRun=0;HaplotypeScore=160.1259;InbreedingCoeff=0.7952;MQ=65.27;MQ0=10;MQRankSum=-0.061;QD=30.58;ReadPosRankSum=1.325;VQSLOD=3.6754;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:81.23:0,81,1312	1/1:3,7:11:23.87:525,24,0	0/0:46,0:27:38.92:0,39,557	0/0:41,0:25:39.12:0,39,620	0/0:22,0:22:33.11:0,33,562	0/0:14,0:14:18.09:0,18,444	0/0:22,0:22:18.04:0,18,280	0/0:22,0:22:38.36:0,38,804	0/0:18,0:18:35.85:0,36,587	0/0:18,0:18:37.21:0,37,513	0/0:11,0:11:15.05:0,15,256	0/0:24,0:24:39.12:0,39,619	0/0:21,0:22:44.55:0,45,687	0/0:22,0:22:33.10:0,33,563	1/1:10,19:30:42.28:1275,42,0	0/0:24,0:25:60.18:0,60,966	0/0:20,0:18:26.57:0,27,459	0/0:11,0:11:24.24:0,24,370	0/0:16,0:16:42.13:0,42,687	0/0:22,0:22:51.17:0,51,846	0/0:28,0:27:53.50:0,54,849	0/0:27,0:26:60.14:0,60,964	0/0:17,0:17:42.13:0,42,689	0/0:21,0:21:42.14:0,42,716	0/0:14,0:16:21:0,21,359	0/0:23,0:23:52.36:0,52,789	0/0:31,0:32:81.21:0,81,1328	0/1:14,0:14:7.08:7,0,193
chr10	47109411	.	GCACCCA	G	1060.04	PASS	AB=0.813;AC=6;AF=0.107;AN=56;BaseQRankSum=2.263;DP=646;FS=24.228;HRun=0;HaplotypeScore=173.5859;InbreedingCoeff=-0.1210;MQ=51.23;MQ0=26;MQRankSum=-6.372;QD=9.91;ReadPosRankSum=-2.452;VQSLOD=1.1391;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:95.14:0,95,3298	0/0:10,0:10:27.09:0,27,751	0/0:64,0:19:53.51:0,54,1323	0/0:63,0:24:65.17:0,65,1602	0/0:19,3:21:36.12:0,36,1336	0/0:12,0:12:33.58:0,34,1171	0/0:15,1:16:20.82:0,21,658	0/1:20,5:24:99:229,0,2055	0/0:19,0:19:44.88:0,45,1450	0/1:14,5:19:99:291,0,1397	0/0:10,2:12:15.05:0,15,564	0/0:17,0:17:39.13:0,39,1324	0/0:20,0:21:54.19:0,54,1784	0/0:19,4:24:34.56:0,35,1233	0/0:22,0:22:40.73:0,41,1463	0/0:21,0:21:57.20:0,57,2049	0/1:13,6:17:99:189,0,925	0/1:9,2:11:99:117,0,799	0/0:19,0:19:57.03:0,57,1935	0/0:21,0:20:60.21:0,60,2176	0/0:30,0:30:65.25:0,65,2157	0/0:26,0:25:60.21:0,60,2215	0/0:18,0:18:45.15:0,45,1640	0/0:20,0:20:48:0,48,1674	0/0:14,2:15:23.42:0,23,763	0/1:19,5:24:99:308,0,1947	0/0:29,0:29:84.29:0,84,3056	0/1:7,2:9:51.24:51,0,621
chr10	47109469	.	GAGAGAGAGAGAGAGAGAGAGAT	G	1646.72	PASS	AB=0.961;AC=10;AF=0.192;AN=52;BaseQRankSum=5.653;DP=458;FS=31.055;HRun=0;HaplotypeScore=205.9790;InbreedingCoeff=-0.0691;MQ=40.51;MQ0=24;MQRankSum=0.386;QD=10.98;ReadPosRankSum=2.808;VQSLOD=1.3393;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:31:42.14:0,42,1751	0/0:4,0:4:0.47:0,0,1	0/0:14,0:2:6.02:0,6,259	0/0:23,0:3:9.03:0,9,314	0/0:25,0:24:0.29:0,0,46	0/0:16,0:16:9.97:0,10,171	0/0:19,0:16:13.33:0,13,139	0/0:8,0:6:9.83:0,10,103	0/1:17,1:18:52.73:132,0,53	0/1:28,1:27:99:366,0,245	./.	0/0:9,1:10:3.89:0,4,29	0/1:13,0:13:59.33:141,0,59	0/0:21,0:21:0.67:0,1,1	0/0:16,0:16:20.86:0,21,988	0/0:14,0:14:3.91:0,4,12	0/1:13,0:10:30.63:55,0,31	0/1:9,0:9:17.37:82,0,17	0/0:10,0:9:17.46:0,17,290	0/0:10,0:9:12.49:0,12,343	0/1:20,0:17:7.49:7,0,362	0/0:28,1:28:5.59:0,6,36	0/0:9,1:8:5.59:0,6,35	0/0:25,0:23:6:0,6,51	./.	0/1:17,7:24:99:731,0,190	0/1:15,0:15:20.92:21,0,582	1/1:9,0:8:8.86:244,9,0
chr10	47109471	.	GAGAGAGAGAGAGAGAGAGAT	G	2068.38	PASS	AB=0.987;AC=16;AF=0.308;AN=52;BaseQRankSum=3.726;DP=457;FS=28.022;HRun=0;HaplotypeScore=193.0155;InbreedingCoeff=-0.0132;MQ=40.42;MQ0=25;MQRankSum=0.189;QD=10.50;ReadPosRankSum=1.636;VQSLOD=0.5826;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:31:42.14:0,42,1352	0/0:4,0:4:0.47:0,0,1	0/0:14,0:2:6.02:0,6,210	0/0:24,0:3:8.90:0,9,249	0/0:25,0:24:0.26:0,0,21	0/0:16,0:16:9.95:0,10,96	0/0:18,0:15:7.87:0,8,58	0/1:9,0:7:14.53:15,0,35	0/1:16,1:17:3.45:163,0,3	0/1:29,0:27:75.58:438,0,76	./.	0/1:10,0:10:11.99:12,0,17	0/1:12,1:13:31.56:175,0,32	0/0:21,0:21:0.94:0,1,2	0/1:16,0:16:1.09:1,0,809	1/1:13,0:13:1.01:7,1,0	0/1:13,0:10:10.56:89,0,11	1/1:9,0:9:8.75:133,9,0	0/0:10,0:9:13.83:0,14,180	0/0:11,0:10:13.32:0,13,252	0/1:19,0:17:7.38:7,0,235	0/0:29,0:28:2.86:0,3,16	0/0:9,1:8:4.78:0,5,26	0/0:11,13:22:5.95:0,6,42	./.	0/1:23,0:23:62.80:802,0,63	0/1:17,0:16:62.24:62,0,402	1/1:8,1:8:8.90:305,9,0
chr10	47109473	.	GAGAGAGAGAGAGAGAGAT	G	2602.28	PASS	AB=0.972;AC=27;AF=0.519;AN=52;BaseQRankSum=2.224;DP=459;FS=25.282;HRun=0;HaplotypeScore=180.4524;InbreedingCoeff=0.1789;MQ=40.85;MQ0=27;MQRankSum=0.494;QD=8.31;ReadPosRankSum=0.618;VQSLOD=1.2878;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:37,0:33:23.79:24,0,935	0/0:4,0:4:0.89:0,1,2	0/0:18,0:3:9.02:0,9,187	0/0:29,0:6:17.78:0,18,289	1/1:11,12:22:1.55:4,2,0	0/0:13,0:13:4.02:0,4,11	0/1:16,0:13:1.36:20,0,1	1/1:9,0:7:3.90:47,4,0	1/1:16,1:17:4.07:149,4,0	1/1:18,10:26:20.26:529,20,0	./.	0/1:10,0:10:12.03:12,0,13	0/1:13,0:13:18.07:156,0,18	0/0:19,0:19:0.94:0,1,1	0/1:17,0:17:1.09:1,0,645	1/1:14,0:14:1.47:24,1,0	1/1:14,0:11:8.58:174,9,0	1/1:7,0:7:8.91:181,9,0	0/1:12,0:11:50.46:50,0,72	0/0:11,0:10:12.75:0,13,185	0/1:19,0:17:13.58:14,0,121	0/1:19,10:28:0:0,0,0	0/0:8,1:7:4.17:0,4,19	0/0:24,0:22:5.87:0,6,35	./.	1/1:21,1:22:11.23:922,11,0	0/1:17,0:16:99:143,0,267	1/1:9,0:8:8.90:304,9,0
chr10	47109475	.	GAGAGAGAGAGAGAGAT	G	2826.07	PASS	AB=1.000;AC=35;AF=0.700;AN=50;BaseQRankSum=1.352;DP=464;FS=0.000;HRun=0;HaplotypeScore=174.8059;InbreedingCoeff=0.2845;MQ=44.54;MQ0=27;MQRankSum=1.635;QD=8.03;ReadPosRankSum=0.612;VQSLOD=2.6271;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:38,0:34:55.70:56,0,592	0/0:4,0:4:0.47:0,0,1	0/0:21,0:6:16.60:0,17,168	0/0:33,0:9:23.52:0,24,281	1/1:23,0:22:4.24:28,4,0	1/1:12,1:13:0.78:21,1,0	1/1:16,0:13:6.45:70,6,0	1/1:11,0:9:8.73:79,9,0	1/1:18,0:18:10.99:162,11,0	1/1:27,0:25:26.29:476,26,0	./.	1/1:9,0:9:2.94:18,3,0	1/1:13,1:14:12:197,12,0	0/1:18,0:18:0.26:0,0,1	0/1:17,0:17:1.09:1,0,498	1/1:2,11:13:2.05:36,2,0	1/1:13,0:10:8.94:175,9,0	1/1:8,0:8:9:169,9,0	0/1:12,0:11:4.77:73,0,5	0/0:11,0:10:6.47:0,6,96	0/1:19,0:17:46.76:53,0,47	1/1:28,0:27:0.47:1,0,0	0/1:9,0:7:0.01:0,0,0	./.	./.	1/1:21,0:21:33:857,33,0	0/1:17,0:16:99:233,0,157	1/1:8,0:7:8.90:265,9,0
chr10	47109477	.	GAGAGAGAGAGAGAT	G	3166.84	PASS	AB=0.989;AC=35;AF=0.700;AN=50;BaseQRankSum=1.383;DP=486;FS=6.968;HRun=0;HaplotypeScore=170.0144;InbreedingCoeff=0.3207;MQ=44.65;MQ0=28;MQRankSum=2.248;QD=9.18;ReadPosRankSum=-0.096;VQSLOD=1.7815;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:39,0:35:88.76:89,0,307	0/0:4,0:4:0.47:0,0,1	0/0:25,0:6:16.60:0,17,145	0/0:41,0:13:28.86:0,29,260	1/1:23,0:22:3.47:26,3,0	1/1:14,0:14:7.30:52,7,0	1/1:16,0:13:7.45:120,7,0	1/1:12,0:10:13.74:103,14,0	1/1:19,0:19:18.65:189,19,0	1/1:26,0:24:29.76:407,30,0	./.	1/1:12,0:12:11.92:91,12,0	1/1:16,0:16:20.90:245,21,0	0/0:10,8:18:0.21:0,0,1	0/1:19,0:19:45.38:45,0,328	1/1:13,0:13:2.28:17,2,0	1/1:13,0:10:8.94:158,9,0	1/1:3,6:9:11.97:189,12,0	1/1:13,0:12:22.99:160,23,0	0/0:11,0:10:2.99:0,3,38	0/1:17,0:16:7.56:78,0,8	0/1:28,0:27:0:0,0,0	1/1:9,0:7:2.89:16,3,0	./.	./.	1/1:20,0:20:33.52:774,34,0	0/1:17,1:17:41.96:325,0,42	1/1:8,0:7:8.90:228,9,0
chr10	47109479	.	GAGAGAGAGAGAT	G	3552.69	PASS	AB=1.000;AC=41;AF=0.820;AN=50;BaseQRankSum=1.226;DP=487;FS=11.951;HRun=0;HaplotypeScore=160.9199;InbreedingCoeff=0.4120;MQ=46.60;MQ0=28;MQRankSum=0.374;QD=9.95;ReadPosRankSum=0.821;VQSLOD=1.4814;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:39,0:35:99:220,0,100	1/1:4,0:4:2.45:24,2,0	0/0:26,0:6:16.58:0,17,110	0/0:47,0:16:34.73:0,35,271	1/1:21,1:21:3:25,3,0	1/1:14,0:14:10.13:71,10,0	1/1:16,0:13:8:75,8,0	1/1:14,0:12:22.06:166,22,0	1/1:18,1:19:20.37:189,20,0	1/1:26,0:24:32.49:372,32,0	./.	1/1:13,0:13:14.92:116,15,0	1/1:15,0:15:20.90:229,21,0	0/0:18,0:18:0.40:0,0,1	0/1:19,0:19:64.39:64,0,175	1/1:13,0:13:2.58:17,3,0	1/1:13,0:10:8.94:139,9,0	1/1:9,0:9:11.97:169,12,0	1/1:14,0:13:30.38:261,30,0	0/1:10,0:9:0.04:0,0,11	1/1:17,0:15:15.37:114,15,0	1/1:24,1:24:0.47:1,0,0	1/1:9,0:7:2.89:16,3,0	./.	./.	1/1:19,1:20:33.53:710,34,0	1/1:18,0:17:10.78:381,11,0	1/1:8,0:7:8.90:194,9,0
chr10	47109481	.	GAGAGAGAGAT	G	3754.03	PASS	AB=1.000;AC=44;AF=0.846;AN=52;BaseQRankSum=1.541;DP=489;FS=17.286;HRun=0;HaplotypeScore=152.3022;InbreedingCoeff=0.3998;MQ=48.45;MQ0=28;MQRankSum=-0.200;QD=9.93;ReadPosRankSum=2.280;VQSLOD=1.5193;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:38,0:34:8.91:331,0,9	1/1:4,0:4:2.61:24,3,0	0/0:30,0:8:22.23:0,22,149	0/0:50,0:18:41.34:0,41,312	1/1:22,0:21:3:25,3,0	1/1:13,0:13:11.84:87,12,0	1/1:16,0:13:15.27:127,15,0	1/1:14,0:12:22.84:174,23,0	1/1:19,0:19:20.50:174,21,0	1/1:24,0:22:33.61:340,34,0	1/1:9,0:8:3:25,3,0	1/1:11,0:11:14.92:116,15,0	1/1:16,0:16:23.89:239,24,0	0/1:18,0:18:0.09:0,0,1	0/1:19,0:19:64.73:118,0,65	1/1:13,0:13:2.41:17,2,0	1/1:13,0:10:8.95:121,9,0	1/1:9,0:9:11.97:150,12,0	1/1:14,0:13:32.90:304,33,0	1/1:9,0:8:4.19:14,4,0	1/1:17,0:15:20.89:163,21,0	0/1:25,0:24:0:0,0,0	1/1:8,0:6:2.82:16,3,0	./.	./.	1/1:19,1:20:34.41:599,34,0	1/1:17,2:18:27.94:427,28,0	1/1:5,3:7:8.90:163,9,0
chr10	47109483	.	GAGAGAGAT	G	4057.61	PASS	AB=1.000;AC=45;AF=0.865;AN=52;BaseQRankSum=2.387;DP=481;FS=18.253;HRun=0;HaplotypeScore=140.7606;InbreedingCoeff=0.5838;MQ=49.55;MQ0=28;MQRankSum=-1.016;QD=11.63;ReadPosRankSum=3.218;VQSLOD=1.1066;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:37,0:33:51.83:510,52,0	1/1:5,0:5:5.78:49,6,0	0/0:33,0:11:24.41:0,24,205	0/0:52,0:19:42.92:0,43,345	1/1:20,0:19:3:25,3,0	1/1:13,0:13:11.83:87,12,0	1/1:17,0:14:18.68:153,19,0	1/1:17,0:15:32.56:260,33,0	1/1:18,0:18:20.50:160,20,0	1/1:21,0:19:33.50:312,34,0	1/1:9,0:8:3:25,3,0	1/1:10,0:10:14.92:116,15,0	1/1:17,0:17:29.89:275,30,0	0/0:17,1:18:0.40:0,0,1	1/1:18,0:18:7.14:195,7,0	1/1:13,0:13:2.54:17,3,0	1/1:13,0:11:8.95:105,9,0	1/1:8,0:8:11.97:133,12,0	1/1:1,11:11:32.90:326,33,0	1/1:9,0:8:9.46:76,9,0	1/1:17,0:15:20.89:163,21,0	0/1:21,0:20:0:0,0,0	1/1:7,0:5:2.88:16,3,0	./.	./.	1/1:19,1:20:34.40:518,34,0	1/1:18,1:18:37.52:403,38,0	1/1:8,0:7:8.90:134,9,0
chr10	47110451	.	C	CT	237.36	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=0.036;DP=655;FS=2.559;HRun=9;HaplotypeScore=71.7441;InbreedingCoeff=0.9729;MQ=79.17;MQ0=0;MQRankSum=-1.459;QD=14.84;ReadPosRankSum=0.856;VQSLOD=3.9821;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:92.27:0,92,806	0/0:6,0:6:15:0,15,130	0/0:15,0:15:22.21:0,22,182	0/0:20,0:23:43.99:0,44,366	0/0:32,1:33:50.79:0,51,670	0/0:21,0:21:47.98:0,48,417	0/0:26,0:26:77.99:0,78,677	0/0:37,0:37:68.92:0,69,595	0/0:21,0:21:59.96:0,60,515	0/0:34,0:34:89.98:0,90,781	0/0:18,0:18:50.99:0,51,443	0/0:17,0:17:44.99:0,45,391	0/0:22,0:23:53.02:0,53,449	1/1:5,11:16:30.08:332,30,0	0/0:23,0:23:53.98:0,54,468	0/0:19,0:19:53.99:0,54,469	0/0:22,0:22:50.92:0,51,436	0/0:21,0:21:47.94:0,48,411	0/0:29,0:29:71.80:0,72,606	0/0:26,0:26:68.98:0,69,599	0/0:20,0:20:50.98:0,51,442	0/0:23,0:23:56.98:0,57,495	0/0:30,0:30:77.95:0,78,673	0/0:24,0:24:65.98:0,66,573	0/0:19,0:19:47.99:0,48,417	0/0:29,0:29:68.94:0,69,590	0/0:36,0:36:98.95:0,99,855	0/0:8,0:8:17.96:0,18,151
chr10	47110634	.	GCAGTTCTCTGTCTGTA	G	14112.09	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=4.944;DP=496;FS=2.892;HRun=0;HaplotypeScore=299.9781;InbreedingCoeff=0.7640;MQ=86.40;MQ0=0;MQRankSum=-7.150;QD=31.86;ReadPosRankSum=6.494;VQSLOD=3.1049;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:23:35.25:508,35,0	1/1:7,0:7:15.05:304,15,0	0/0:30,0:30:11.41:0,11,813	0/0:23,0:23:22.72:0,23,525	1/1:17,0:17:24.04:446,24,0	1/1:27,0:27:36.11:732,36,0	1/1:21,0:21:30.08:531,30,0	1/1:19,11:30:45.02:657,45,0	1/1:16,0:16:21.06:450,21,0	1/1:25,0:25:51.16:1046,51,0	1/1:12,0:12:21.07:435,21,0	1/1:14,0:13:36.12:816,36,0	1/1:16,0:16:36.08:609,36,0	1/1:11,0:11:27.09:545,27,0	1/1:12,0:12:29.86:510,30,0	1/1:7,0:7:15.05:336,15,0	1/1:17,0:17:7.74:194,8,0	1/1:8,0:8:3.01:64,3,0	1/1:12,0:12:13.29:298,13,0	1/1:22,0:22:51.12:991,51,0	1/1:12,0:12:2.94:18,3,0	1/1:20,0:20:36.11:714,36,0	1/1:10,4:14:19.34:428,19,0	1/1:17,0:16:21:265,21,0	1/1:16,0:16:39.08:672,39,0	1/1:32,0:32:56.88:1206,57,0	1/1:26,0:25:45.15:1017,45,0	1/1:9,0:9:15.05:319,15,0
chr10	47110652	.	A	AGTTCTCTATACT	31813.93	PASS	AB=0.632;AC=51;AF=0.911;AN=56;BaseQRankSum=-2.412;DP=404;FS=8.616;HRun=0;HaplotypeScore=175.5074;InbreedingCoeff=0.6815;MQ=72.38;MQ0=0;MQRankSum=-7.997;QD=88.37;ReadPosRankSum=5.939;VQSLOD=3.5856;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,5:18:39.12:1406,39,0	1/1:8,0:8:15.05:751,15,0	0/0:24,0:21:26.21:0,26,1069	0/0:20,0:19:39.32:0,39,849	1/1:12,0:12:23.81:1065,24,0	1/1:22,0:22:36.12:1839,36,0	1/1:15,0:15:36.07:1206,36,0	1/1:20,0:20:51.16:1354,51,0	1/1:10,0:10:21.07:948,21,0	1/1:20,0:20:51.16:2105,51,0	1/1:9,0:9:21.07:1080,21,0	1/1:13,0:12:36.12:1792,36,0	1/1:14,0:14:36.12:1222,36,0	1/1:10,0:10:30.10:1212,30,0	1/1:13,1:14:33.09:1170,33,0	1/1:7,0:7:15.05:690,15,0	1/1:7,6:13:7.96:443,8,0	1/1:0,5:6:3.01:181,3,0	1/1:8,0:8:20.56:900,21,0	1/1:17,0:17:51.16:1976,51,0	0/1:5,6:11:21.93:154,0,22	1/1:14,0:14:36.12:1769,36,0	1/1:13,0:13:21.06:932,21,0	1/1:14,0:13:21:618,21,0	1/1:14,0:14:39.09:1511,39,0	1/1:13,10:25:60.19:2531,60,0	1/1:23,0:22:45.15:2055,45,0	1/1:9,0:9:15.05:906,15,0
chr10	47110656	.	CTCTG	C	9876.82	PASS	AB=0.690;AC=46;AF=0.821;AN=56;BaseQRankSum=4.435;DP=372;FS=15.920;HRun=0;HaplotypeScore=189.1531;InbreedingCoeff=0.3669;MQ=70.85;MQ0=0;MQRankSum=-5.716;QD=31.16;ReadPosRankSum=6.033;VQSLOD=3.6503;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,6:17:11.50:341,11,0	1/1:5,3:8:15.05:240,15,0	0/0:26,0:23:29.60:0,30,971	0/0:19,0:18:11.93:0,12,752	1/1:4,8:12:24.04:309,24,0	1/1:3,17:20:36.12:528,36,0	0/1:5,7:12:11.97:365,0,12	1/1:18,0:18:42.06:621,42,0	1/1:1,8:9:21.07:323,21,0	1/1:2,16:18:48.16:772,48,0	1/1:1,8:9:21.07:311,21,0	1/1:1,12:12:36.09:545,36,0	1/1:6,7:13:36.10:507,36,0	1/1:1,9:10:1.13:388,1,0	0/1:6,8:14:40.82:326,0,41	1/1:2,4:6:15.05:254,15,0	0/1:9,1:10:13.82:47,0,14	1/1:5,0:5:3.01:39,3,0	0/1:2,5:7:34.05:189,0,34	1/1:2,15:17:48.11:703,48,0	0/0:10,0:9:1.91:0,2,6	1/1:0,13:13:36.12:529,36,0	1/1:5,7:12:19.31:288,19,0	1/1:7,6:12:15.03:184,15,0	1/1:3,10:13:33.09:450,33,0	1/1:13,9:22:27.21:681,27,0	1/1:1,18:19:45.15:729,45,0	1/1:2,5:7:15.05:206,15,0
chr10	47110661	.	T	TA	4622.03	PASS	AB=1.000;AC=43;AF=0.768;AN=56;BaseQRankSum=3.358;DP=325;FS=11.391;HRun=0;HaplotypeScore=184.9088;InbreedingCoeff=0.3859;MQ=67.99;MQ0=0;MQRankSum=-5.106;QD=16.87;ReadPosRankSum=3.488;VQSLOD=5.9292;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:14:6.08:262,6,0	1/1:4,2:6:14.79:114,15,0	0/0:21,0:18:47.24:0,47,576	0/0:21,0:19:52.46:0,52,565	1/1:8,3:11:17.10:213,17,0	1/1:17,0:17:35.08:292,35,0	0/1:11,0:11:29.84:305,0,30	1/1:11,4:15:41.05:356,41,0	1/1:8,0:8:19.10:121,19,0	1/1:16,1:17:18.39:187,18,0	1/1:8,0:8:20.30:171,20,0	1/1:13,0:12:29.80:188,30,0	1/1:7,5:12:34.27:361,34,0	0/1:10,0:10:9.37:213,0,9	0/1:14,0:14:18.53:176,0,19	1/1:4,2:6:13.78:69,14,0	1/1:5,0:5:1.50:36,2,0	0/0:3,0:3:1.25:0,1,3	0/1:6,0:6:2.07:2,0,42	1/1:15,1:16:21.12:317,21,0	0/0:6,0:5:2.94:0,3,18	1/1:13,0:13:35.41:332,35,0	1/1:11,0:11:11.48:134,11,0	1/1:8,2:9:13.71:156,14,0	1/1:12,0:12:32.14:287,32,0	0/1:15,0:15:18.01:77,0,18	1/1:18,0:17:29:206,29,0	1/1:5,1:6:6.83:47,7,0
chr10	47110675	.	TATACA	T	5515.55	PASS	AB=0.701;AC=47;AF=0.870;AN=54;BaseQRankSum=8.989;DP=254;FS=10.083;HRun=0;HaplotypeScore=173.5923;InbreedingCoeff=0.3697;MQ=67.54;MQ0=0;MQRankSum=-5.715;QD=27.44;ReadPosRankSum=3.970;VQSLOD=3.9016;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,2:8:9.47:104,9,0	1/1:1,3:4:9.02:101,9,0	0/0:20,0:18:49.04:0,49,1283	0/0:22,0:19:29.73:0,30,1116	1/1:0,8:8:18:210,18,0	1/1:0,9:9:27.08:320,27,0	1/1:2,5:7:12.88:116,13,0	./.	1/1:0,6:6:18.06:236,18,0	1/1:0,10:10:30.07:384,30,0	1/1:0,7:7:18.05:219,18,0	1/1:0,12:11:33.10:420,33,0	1/1:1,4:5:15.04:196,15,0	1/1:1,6:7:8.99:220,9,0	0/1:9,6:15:29.69:219,0,30	1/1:0,4:4:12.04:160,12,0	0/1:4,1:5:26.94:62,0,27	1/1:2,0:2:3.01:32,3,0	0/1:1,4:5:50.05:105,0,50	1/1:0,13:13:35.85:456,36,0	1/1:6,0:5:4.78:17,5,0	1/1:0,10:10:27.08:330,27,0	1/1:4,7:11:18.05:216,18,0	1/1:1,6:6:6:56,6,0	1/1:0,7:7:21.06:250,21,0	1/1:5,9:14:6.09:396,6,0	1/1:0,14:14:39.12:528,39,0	1/1:0,5:5:15.04:163,15,0
chr10	47110676	.	ATACAGCTCTCTG	A	424.71	PASS	AB=0.965;AC=37;AF=0.661;AN=56;BaseQRankSum=7.623;DP=255;FS=7.872;HRun=0;HaplotypeScore=221.1135;InbreedingCoeff=0.1904;MQ=67.41;MQ0=0;MQRankSum=-4.135;QD=2.24;ReadPosRankSum=2.892;VQSLOD=1.1019;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:8:6.40:0,6,92	1/1:3,1:4:4.37:22,4,0	0/0:19,0:18:38.18:0,38,613	0/0:20,0:19:10.72:0,11,701	1/1:8,0:8:8.52:64,9,0	1/1:9,0:9:5.81:13,6,0	0/0:7,0:7:3.92:0,4,49	0/1:11,0:11:0:0,0,0	1/1:6,0:6:7.60:24,8,0	0/1:10,0:10:10.12:10,0,24	1/1:7,0:7:6:15,6,0	1/1:12,0:11:8.35:28,8,0	1/1:5,0:5:8.70:27,9,0	0/1:7,0:7:8.67:9,0,39	0/1:8,7:15:23.77:70,0,24	1/1:4,0:4:5.35:16,5,0	0/1:5,0:5:15.49:27,0,15	0/1:2,0:2:0:0,0,0	0/1:5,0:5:13.91:21,0,14	0/1:13,0:13:7.70:27,0,8	0/1:6,0:5:20.83:21,0,26	1/1:10,0:10:8.37:22,8,0	1/1:11,0:11:8.18:65,8,0	0/0:7,0:6:2.14:0,2,10	1/1:7,0:7:4.58:14,5,0	1/1:14,0:14:8.23:47,8,0	1/1:14,0:13:7.94:37,8,0	1/1:5,0:5:1.41:3,1,0
chr10	47110681	.	GCTC	G	3197.24	PASS	AB=0.675;AC=41;AF=0.759;AN=54;BaseQRankSum=9.254;DP=268;FS=15.058;HRun=0;HaplotypeScore=179.3486;InbreedingCoeff=0.1954;MQ=65.12;MQ0=1;MQRankSum=-4.131;QD=15.22;ReadPosRankSum=3.632;VQSLOD=2.6101;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:7,2:10:10.49:46,0,10	0/1:1,3:4:25.82:47,0,26	0/0:19,0:16:38.45:0,38,916	0/0:23,0:18:18.20:0,18,776	1/1:1,8:9:17.85:126,18,0	1/1:1,9:10:26.73:194,27,0	0/1:1,5:7:0.72:49,0,1	./.	1/1:1,6:7:17.91:152,18,0	1/1:0,10:10:29.34:244,29,0	1/1:0,7:7:17.88:136,18,0	1/1:0,12:11:32.78:267,33,0	1/1:3,4:7:14.86:129,15,0	1/1:2,6:9:0.92:128,1,0	0/1:8,6:15:64.94:130,0,65	1/1:2,4:6:11.41:103,11,0	0/1:5,1:6:26.57:27,0,40	1/1:2,0:2:2.94:18,3,0	0/1:1,4:5:25.18:50,0,25	1/1:0,13:13:31.89:288,32,0	0/0:4,0:6:2.27:0,2,8	1/1:1,10:11:26.84:204,27,0	1/1:2,7:9:17.86:135,18,0	1/1:1,6:6:5.45:28,5,0	1/1:0,7:7:20.80:152,21,0	0/1:5,9:14:17.27:265,0,17	1/1:2,14:16:38.27:345,38,0	1/1:2,5:7:14.21:93,14,0
chr10	47110684	.	C	CTG	1177.31	PASS	AB=0.946;AC=43;AF=0.796;AN=54;BaseQRankSum=5.790;DP=279;FS=4.985;HRun=0;HaplotypeScore=188.0585;InbreedingCoeff=-0.0336;MQ=62.62;MQ0=1;MQRankSum=-3.573;QD=4.64;ReadPosRankSum=4.257;VQSLOD=2.4512;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:9,1:10:31.83:32,0,40	0/0:4,0:4:1.83:0,2,17	0/0:20,0:17:14.62:0,15,508	0/1:24,0:17:16.76:17,0,419	1/1:9,0:9:0.32:43,0,0	1/1:10,0:10:1.82:8,2,0	1/1:5,1:7:6.01:62,6,0	1/1:13,0:10:2.94:18,3,0	1/1:7,0:7:10.01:71,10,0	0/1:13,0:12:15.92:33,0,16	1/1:8,0:8:5.77:36,6,0	1/1:12,0:11:1.63:19,2,0	1/1:7,0:7:5.89:59,6,0	1/1:8,1:9:13.18:130,13,0	0/1:13,1:15:18.59:69,0,19	1/1:6,0:6:8.80:74,9,0	0/1:4,0:5:10.93:11,0,11	./.	0/1:6,0:6:15.90:16,0,29	1/1:15,0:15:17.28:105,17,0	1/1:2,3:5:6.02:72,6,0	1/1:12,0:12:2.80:16,3,0	1/1:10,0:10:2.24:58,2,0	1/1:6,0:6:3.01:37,3,0	1/1:7,0:7:2.80:8,3,0	0/1:13,0:13:3.98:123,0,4	1/1:16,0:15:18.35:91,18,0	1/1:7,0:7:6.02:107,6,0
chr10	47110736	.	CTCTA	C	455.04	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=1.202;DP=426;FS=2.152;HRun=0;HaplotypeScore=139.6120;InbreedingCoeff=0.5529;MQ=66.41;MQ0=3;MQRankSum=-5.470;QD=10.34;ReadPosRankSum=-1.537;VQSLOD=3.1134;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:1,22:23:30.10:546,30,0	0/0:9,0:9:23.95:0,24,340	0/0:29,0:20:53.64:0,54,1227	0/0:29,0:23:62.33:0,62,1340	0/0:16,0:16:45.12:0,45,748	0/0:18,0:18:54.17:0,54,980	0/0:20,0:20:54.19:0,54,1017	0/0:48,0:42:8.35:0,8,1461	0/0:4,0:4:12.04:0,12,232	0/0:17,0:16:48.14:0,48,753	0/0:10,0:10:30.10:0,30,554	0/0:3,0:2:6.02:0,6,122	0/0:8,0:8:21.07:0,21,397	0/0:8,0:8:21.05:0,21,367	0/1:21,0:21:11.05:11,0,643	0/0:6,0:6:18.06:0,18,334	0/0:11,0:11:30.10:0,30,575	0/0:5,0:5:15.05:0,15,295	0/0:13,0:11:33.10:0,33,541	0/0:14,0:14:42.13:0,42,735	0/0:22,0:21:48.15:0,48,849	0/0:13,0:13:39.13:0,39,725	0/0:10,0:10:28.64:0,29,473	0/0:5,0:4:12.04:0,12,219	0/0:19,0:19:57.17:0,57,997	0/0:15,0:14:42.14:0,42,750	0/0:20,0:19:60.19:0,60,1089	0/0:10,0:10:27.09:0,27,468
chr10	47110756	.	ATATAGCTCTCTGTCTG	A	658.78	PASS	AB=0.773;AC=2;AF=0.036;AN=56;BaseQRankSum=3.647;DP=489;FS=4.517;HRun=0;HaplotypeScore=251.4667;InbreedingCoeff=-0.0448;MQ=67.40;MQ0=4;MQRankSum=-3.831;QD=21.96;ReadPosRankSum=-0.496;VQSLOD=2.0200;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:35.04:0,35,1350	0/1:4,4:8:99:401,0,457	0/0:30,0:23:59.35:0,59,1614	0/0:30,0:24:43.86:0,44,957	0/0:22,0:22:63.22:0,63,3471	0/0:23,0:23:66.23:0,66,3167	0/0:25,0:25:57.20:0,57,2233	0/0:38,0:33:99:0,99,3002	0/0:4,0:4:9.03:0,9,380	0/0:20,0:20:60.19:0,60,3056	0/0:16,0:16:48.16:0,48,2546	0/0:3,0:2:6.02:0,6,171	0/0:8,0:8:24.08:0,24,917	0/0:11,0:11:24.08:0,24,1355	0/1:19,3:22:99:346,0,1301	0/0:6,0:6:18.06:0,18,785	0/0:17,0:17:45.15:0,45,2570	0/0:9,0:9:27.09:0,27,1193	0/0:24,0:21:63.22:0,63,3005	0/0:17,0:17:51.16:0,51,2665	0/0:25,0:24:66.23:0,66,3318	0/0:13,0:13:36.12:0,36,1714	0/0:9,0:9:24.55:0,25,924	0/0:5,0:4:12.04:0,12,564	0/0:21,0:21:63.22:0,63,3526	0/0:20,0:20:60.21:0,60,3169	0/0:28,0:27:78.27:0,78,4494	0/0:9,0:9:27.09:0,27,1559
chr10	47111607	.	CT	C	9143.23	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=2.008;DP=588;FS=2.672;HRun=11;HaplotypeScore=124.6207;InbreedingCoeff=0.9001;MQ=76.57;MQ0=1;MQRankSum=-0.274;QD=17.72;ReadPosRankSum=4.384;VQSLOD=4.2759;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,42:51:99:954,120,0	0/0:8,0:8:21.05:0,21,223	0/0:18,0:17:10.91:0,11,243	0/0:16,0:12:14.60:0,15,122	1/1:6,13:19:36.81:297,37,0	1/1:2,13:15:32.95:271,33,0	1/1:3,22:25:27.94:436,28,0	1/1:8,21:29:59.88:492,60,0	1/1:5,26:31:62.92:517,63,0	1/1:3,12:16:37.98:301,38,0	1/1:5,9:14:0.08:209,0,0	1/1:4,17:22:46.97:375,47,0	1/1:5,14:19:29.94:246,30,0	1/1:3,18:21:53.93:443,54,0	0/0:28,1:30:46.67:0,47,718	1/1:2,24:26:49.18:516,49,0	1/1:3,35:38:92.89:764,93,0	1/1:5,17:22:47.91:391,48,0	1/1:3,11:15:37.01:283,37,0	1/1:2,16:18:35.89:295,36,0	1/1:3,24:28:64.96:523,65,0	1/1:2,14:16:29.92:246,30,0	1/1:1,7:8:17.98:148,18,0	1/1:3,15:21:48.06:362,48,0	1/1:0,7:7:14.98:123,15,0	1/1:3,22:25:59.19:464,59,0	1/1:4,19:23:12.96:313,13,0	1/1:0,7:7:20.98:172,21,0
chr10	47111723	.	TG	T	517.34	PASS	AC=4;AF=0.074;AN=54;BaseQRankSum=3.459;DP=489;FS=0.842;HRun=8;HaplotypeScore=66.7948;InbreedingCoeff=0.9913;MQ=63.94;MQ0=0;MQRankSum=0.713;QD=17.84;ReadPosRankSum=2.006;VQSLOD=3.6605;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:82.47:0,82,962	1/1:2,9:11:21.03:203,21,0	0/0:18,0:16:33:0,33,368	0/0:15,0:14:27.08:0,27,321	0/0:12,0:12:24.04:0,24,266	0/0:13,0:13:24.07:0,24,290	0/0:17,0:17:48.15:0,48,580	0/0:23,0:23:54.06:0,54,597	0/0:12,0:12:30.08:0,30,350	0/0:24,0:24:57.17:0,57,687	0/0:21,0:21:57.17:0,57,688	0/0:18,0:18:42.11:0,42,484	0/0:13,0:13:39.11:0,39,456	0/0:20,0:20:45.10:0,45,508	1/1:1,17:18:45.07:434,45,0	0/0:17,0:17:48.15:0,48,580	0/0:20,0:20:54.17:0,54,652	0/0:13,0:13:30.08:0,30,351	0/0:16,0:16:27.07:0,27,316	0/0:12,0:12:21.04:0,21,231	0/0:22,0:22:54.15:0,54,642	0/0:21,0:21:42.13:0,42,507	0/0:16,0:16:48.14:0,48,569	0/0:21,0:21:54.17:0,54,652	0/0:18,0:18:42.10:0,42,485	0/0:11,0:11:27.07:0,27,315	0/0:23,0:22:57.16:0,57,677	./.
chr10	47113684	.	CCCCA	C	472.46	PASS	AC=18;AF=0.333;AN=54;BaseQRankSum=1.218;DP=252;FS=4.724;HRun=0;HaplotypeScore=44.4478;InbreedingCoeff=0.6292;MQ=44.92;MQ0=12;MQRankSum=-1.773;QD=6.75;ReadPosRankSum=1.378;VQSLOD=0.8543;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:17:0.21:0,0,55	0/0:6,0:6:10.33:0,10,42	./.	0/0:9,0:4:11.56:0,12,87	0/0:5,0:5:2.49:0,2,17	1/1:6,11:17:21.88:284,22,0	1/1:4,11:14:2.95:50,3,0	0/0:10,0:7:18.02:0,18,208	1/1:4,0:4:2.94:26,3,0	0/0:10,0:8:14.98:0,15,149	0/0:7,0:7:5.28:0,5,96	1/1:6,1:5:2.95:51,3,0	1/1:7,0:7:8.62:58,9,0	0/0:9,0:8:12.50:0,12,142	0/0:14,0:14:20.80:0,21,76	1/1:1,1:2:3.01:51,3,0	0/0:13,0:12:14.99:0,15,207	0/0:14,0:12:18.90:0,19,251	0/0:14,0:12:23.66:0,24,245	0/0:9,0:9:14.94:0,15,134	0/0:8,0:7:2.96:0,3,19	1/1:5,0:3:6.47:72,6,0	1/1:3,0:2:2.96:19,3,0	1/1:10,0:9:5.12:26,5,0	0/0:4,0:4:0.47:0,0,1	0/0:5,0:5:6.01:0,6,62	0/0:10,0:10:15.43:0,15,156	0/0:14,0:13:21.03:0,21,254
chr10	47113685	.	CCCA	C	638.70	PASS	AB=0.981;AC=23;AF=0.426;AN=54;BaseQRankSum=4.276;DP=239;FS=1.672;HRun=0;HaplotypeScore=38.7591;InbreedingCoeff=0.5439;MQ=45.95;MQ0=11;MQRankSum=-1.732;QD=6.39;ReadPosRankSum=3.965;VQSLOD=1.7010;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:16,1:16:28.48:130,0,28	0/1:6,0:6:3.05:31,0,3	./.	0/0:9,0:4:11.86:0,12,96	0/0:5,0:5:2.73:0,3,17	1/1:14,0:14:21.72:165,22,0	1/1:13,0:12:2.99:27,3,0	0/0:10,0:8:21:0,21,204	1/1:4,0:4:2.98:26,3,0	0/0:11,0:9:12.02:0,12,120	0/0:7,0:7:5.74:0,6,84	1/1:6,0:4:2.98:28,3,0	1/1:5,0:5:8.98:88,9,0	0/0:9,0:8:11.91:0,12,91	1/1:14,0:14:7:133,7,0	1/1:1,0:1:3:28,3,0	0/0:13,0:12:14.68:0,15,152	0/0:14,0:12:9.49:0,9,145	0/0:13,1:12:23.16:0,23,190	0/0:8,0:8:13.24:0,13,105	0/0:8,0:7:2.96:0,3,19	1/1:5,0:3:6.46:49,6,0	1/1:1,2:2:2.96:19,3,0	1/1:3,5:8:5.76:87,6,0	0/1:4,0:4:0:0,0,0	0/0:4,0:4:2.96:0,3,19	0/0:10,0:10:14.84:0,15,113	0/0:14,0:13:20.99:0,21,181
chr10	47115867	.	C	CTTCCTTCT	1830.68	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=-1.758;DP=711;FS=7.955;HRun=0;HaplotypeScore=232.4036;InbreedingCoeff=0.6114;MQ=58.50;MQ0=5;MQRankSum=-7.211;QD=22.88;ReadPosRankSum=-0.115;VQSLOD=2.0075;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:72.16:0,72,1586	0/0:7,0:7:16.39:0,16,95	0/0:26,0:7:3.52:0,4,38	0/0:56,0:17:14.70:0,15,179	0/0:25,0:25:54.17:0,54,1233	1/1:21,6:27:3.31:1445,3,0	1/1:7,19:27:12.51:487,13,0	0/0:28,0:28:52.31:0,52,1083	0/0:21,0:21:36.12:0,36,790	0/0:28,0:28:66.20:0,66,1409	0/0:20,0:20:54.17:0,54,1262	0/0:21,0:21:51.17:0,51,1059	0/0:24,0:24:45.15:0,45,959	0/0:33,0:33:87.19:0,87,1811	0/0:28,0:28:58.09:0,58,504	0/0:25,0:25:66.18:0,66,1347	0/0:31,0:31:71.50:0,71,1690	0/0:27,0:27:66.14:0,66,1483	0/0:13,0:13:2.87:0,3,201	0/0:30,0:29:42.78:0,43,982	0/0:29,0:29:14.10:0,14,813	0/0:20,0:20:41.49:0,41,776	0/0:25,0:25:63.19:0,63,1289	0/0:28,0:28:60.19:0,60,1223	0/0:19,0:19:45.15:0,45,1116	0/0:29,0:29:57.16:0,57,1321	0/1:26,0:25:2.43:2,0,563	0/0:8,0:8:14.62:0,15,337
chr10	47115881	.	TCTTC	T	5772.98	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=2.532;DP=693;FS=0.387;HRun=0;HaplotypeScore=153.5964;InbreedingCoeff=0.9403;MQ=56.55;MQ0=4;MQRankSum=2.745;QD=33.96;ReadPosRankSum=1.035;VQSLOD=4.7844;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:69.24:0,69,1620	0/0:8,0:10:27.47:0,27,384	0/0:10,0:3:0:0,0,0	0/0:31,0:8:6.02:0,6,141	0/0:22,0:22:45.15:0,45,1061	0/0:24,0:24:51.07:0,51,832	0/0:29,0:29:33.11:0,33,734	0/0:30,0:30:42.13:0,42,850	1/1:6,15:21:24.01:436,24,0	0/0:32,0:32:84.29:0,84,1954	0/0:20,0:20:45.15:0,45,1077	1/1:7,14:21:51.17:831,51,0	1/1:8,15:23:33.11:539,33,0	0/0:31,0:31:81.27:0,81,1820	0/0:14,0:26:57.13:0,57,935	1/1:14,13:27:66.22:1051,66,0	0/0:27,0:28:66.22:0,66,1439	0/0:30,0:30:60.12:0,60,1306	0/0:12,0:15:9.18:0,9,165	0/0:24,0:33:67.15:0,67,768	0/0:17,0:35:47.72:0,48,446	1/1:5,17:22:48.09:724,48,0	1/1:13,14:27:69.23:1099,69,0	1/1:14,15:29:72.17:1093,72,0	0/0:19,0:19:42.14:0,42,993	0/0:24,0:24:63.22:0,63,1493	0/0:10,0:28:40.45:0,40,454	0/0:7,0:7:18.06:0,18,436
chr10	47115996	.	C	CTA	31277.98	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-5.585;DP=643;FS=3.365;HRun=0;HaplotypeScore=84.6124;InbreedingCoeff=0.9993;MQ=84.37;MQ0=0;MQRankSum=-9.629;QD=51.87;ReadPosRankSum=5.396;VQSLOD=5.4377;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,22:22:63.22:1216,63,0	1/1:0,12:12:36.12:695,36,0	0/0:24,0:24:60.20:0,60,885	0/0:16,0:16:28.48:0,28,523	1/1:3,21:24:63.22:1217,63,0	1/1:0,28:28:78.27:1504,78,0	1/1:1,29:30:78.27:1498,78,0	1/1:4,36:41:99:2208,117,0	1/1:1,17:18:51.17:985,51,0	1/1:3,23:26:72.25:1379,72,0	1/1:1,12:13:33.11:637,33,0	1/1:0,18:18:48.16:927,48,0	1/1:1,22:23:57.20:1099,57,0	1/1:1,24:26:66.23:1275,66,0	1/1:5,29:34:75.26:1449,75,0	1/1:1,23:24:69.24:1333,69,0	1/1:0,17:17:48.16:927,48,0	1/1:0,17:17:42.14:811,42,0	1/1:2,12:14:36.12:695,36,0	1/1:1,34:35:99:1970,102,0	1/1:2,13:15:39.13:753,39,0	1/1:1,23:24:60.21:1159,60,0	1/1:0,20:20:57.20:1100,57,0	1/1:0,15:15:39.13:753,39,0	1/1:3,24:27:69.24:1329,69,0	1/1:1,27:28:84.29:1605,84,0	1/1:2,29:32:87.30:1662,87,0	1/1:1,19:20:57.20:1091,57,0
chr10	47116330	.	T	TA	1219.10	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-4.125;DP=698;FS=0.000;HRun=6;HaplotypeScore=77.2950;InbreedingCoeff=0.9970;MQ=77.79;MQ0=0;MQRankSum=-0.502;QD=28.35;ReadPosRankSum=-0.022;VQSLOD=3.9745;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,102,1032	0/0:10,0:10:30.07:0,30,306	0/0:15,0:15:21.13:0,21,336	0/0:17,0:17:42.07:0,42,416	0/0:34,0:34:93.21:0,93,949	1/1:4,18:22:57.14:699,57,0	1/1:3,18:21:51.16:642,51,0	0/0:37,0:37:99:0,108,1097	0/0:18,0:18:48.10:0,48,490	0/0:28,0:28:78.13:0,78,785	0/0:20,0:20:54.12:0,54,550	0/0:22,0:22:51.10:0,51,513	0/0:36,0:36:99:0,102,1034	0/0:16,0:16:42.09:0,42,428	0/0:24,0:24:63.14:0,63,643	0/0:29,0:29:75.17:0,75,765	0/0:30,0:30:78.17:0,78,795	0/0:14,0:14:36.08:0,36,367	0/0:22,0:22:60.12:0,60,606	0/0:33,0:33:93.21:0,93,949	0/0:28,0:28:75.09:0,75,740	0/0:25,0:25:75.17:0,75,765	0/0:31,0:31:81.18:0,81,826	0/0:27,0:27:60.11:0,60,603	0/0:23,0:23:69.16:0,69,704	0/0:33,0:33:93.19:0,93,942	0/0:36,0:36:90.18:0,90,910	0/0:10,0:10:27.06:0,27,275
chr10	47116377	.	G	GA	3976.95	PASS	AB=0.732;AC=14;AF=0.250;AN=56;BaseQRankSum=-10.333;DP=697;FS=1.569;HRun=10;HaplotypeScore=79.0724;InbreedingCoeff=0.7915;MQ=74.07;MQ0=1;MQRankSum=-1.243;QD=20.82;ReadPosRankSum=1.338;VQSLOD=4.5844;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:46:82.88:0,83,258	0/0:10,0:10:26.96:0,27,222	0/0:14,0:14:21.85:0,22,169	0/0:16,0:15:7.77:0,8,126	0/0:33,0:33:89.85:0,90,733	0/0:2,0:22:38.70:0,39,114	0/0:3,0:16:28.51:0,29,83	0/0:18,1:19:15.96:0,16,337	1/1:5,21:26:16.02:518,16,0	0/0:21,0:22:55.94:0,56,445	0/0:21,1:23:26.98:0,27,417	1/1:1,16:18:41.91:430,42,0	1/1:5,30:35:84.21:895,84,0	0/0:17,0:17:41.92:0,42,342	0/0:22,0:22:59.88:0,60,486	1/1:5,26:32:66:686,66,0	0/0:34,1:35:66.88:0,67,752	0/0:17,1:19:32.92:0,33,271	0/0:28,0:28:59.91:0,60,492	0/0:30,1:32:44.90:0,45,557	0/0:29,0:29:68.88:0,69,566	1/1:3,12:16:35.92:366,36,0	1/1:8,15:24:44.94:456,45,0	0/1:6,24:30:41.64:594,0,42	0/0:25,1:26:30.90:0,31,459	0/0:28,0:30:57.94:0,58,455	0/0:45,0:45:99:0,123,1002	0/1:9,1:10:33.03:33,0,124
chr10	47116506	.	G	GAAAA	16365.34	PASS	AB=1.000;AC=49;AF=0.875;AN=56;BaseQRankSum=-4.325;DP=616;FS=5.093;HRun=11;HaplotypeScore=133.7488;InbreedingCoeff=0.6811;MQ=76.56;MQ0=0;MQRankSum=-4.636;QD=29.28;ReadPosRankSum=-3.713;VQSLOD=2.3589;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:6,0:46:77.60:856,78,0	1/1:4,4:10:21.07:420,21,0	0/0:18,0:17:22.14:0,22,263	0/1:22,0:21:26.58:27,0,148	1/1:7,10:24:48.01:766,48,0	0/0:4,0:17:1.89:0,2,57	0/0:4,0:22:4.52:0,5,31	1/1:17,5:26:51.14:962,51,0	1/1:9,12:22:41.35:803,41,0	1/1:8,8:17:33.11:703,33,0	1/1:22,2:28:58.66:1117,59,0	1/1:3,1:8:9.03:134,9,0	1/1:9,3:20:34.93:615,35,0	1/1:5,8:15:24.08:488,24,0	1/1:7,14:24:26.30:483,26,0	1/1:10,12:23:33.58:723,34,0	1/1:12,17:33:37.18:744,37,0	1/1:3,8:14:24.08:479,24,0	1/1:14,12:27:51.15:1047,51,0	1/1:11,10:27:60.12:1023,60,0	1/1:9,11:23:15.05:335,15,0	1/1:11,10:24:54.18:1068,54,0	1/1:8,7:17:20.28:351,20,0	1/1:4,14:23:35.99:621,36,0	1/1:4,9:14:22.62:421,23,0	1/1:15,8:25:51.11:961,51,0	1/1:7,22:31:36.59:783,37,0	1/1:2,7:12:24:434,24,0
chr10	47116926	.	AT	A	8567.72	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-5.945;DP=507;FS=1.793;HRun=8;HaplotypeScore=79.9636;InbreedingCoeff=0.8847;MQ=63.35;MQ0=12;MQRankSum=0.749;QD=22.20;ReadPosRankSum=2.506;VQSLOD=5.3564;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,32:33:84.13:810,84,0	1/1:0,7:7:18.03:174,18,0	0/0:43,1:12:20.05:0,20,155	0/0:55,1:17:17.59:0,18,260	1/1:3,24:27:66.10:633,66,0	0/0:20,0:20:11.29:0,11,60	1/1:5,0:5:0.89:2,1,0	1/1:6,25:31:75.11:723,75,0	1/1:1,16:15:30.05:290,30,0	1/1:0,14:14:42.06:403,42,0	1/1:2,19:21:51.07:490,51,0	1/1:3,6:9:18.03:174,18,0	1/1:1,6:7:18.03:173,18,0	1/1:1,4:4:12.02:116,12,0	1/1:1,11:12:30.05:289,30,0	1/1:1,14:15:33.05:319,33,0	1/1:4,22:24:63.10:607,63,0	1/1:2,9:10:24.04:232,24,0	1/1:1,14:15:42.07:403,42,0	1/1:1,9:10:27.04:260,27,0	1/1:2,6:7:20.90:189,21,0	1/1:1,10:11:24.04:230,24,0	1/1:1,17:18:36.05:345,36,0	1/1:3,7:8:15.02:145,15,0	1/1:4,19:22:51.08:492,51,0	1/1:3,18:21:54.08:521,54,0	1/1:2,17:19:48.07:461,48,0	1/1:6,3:8:9.01:87,9,0
chr10	47116928	.	T	TTTATTTTATTTTA	1374.03	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-4.263;DP=517;FS=2.978;HRun=0;HaplotypeScore=203.7942;InbreedingCoeff=0.8220;MQ=62.21;MQ0=12;MQRankSum=-2.635;QD=49.07;ReadPosRankSum=1.274;VQSLOD=3.5838;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:35:84.32:0,84,2298	0/0:7,0:7:20.51:0,21,487	0/0:43,0:11:13.68:0,14,228	0/0:57,0:17:33.74:0,34,489	0/0:26,0:26:62.24:0,62,1119	1/1:1,18:22:21.07:1301,21,0	1/1:0,6:6:3.01:181,3,0	0/0:32,0:32:84.78:0,85,1354	0/0:17,0:15:28.04:0,28,622	0/0:17,0:17:41.36:0,41,874	0/0:20,0:20:54.26:0,54,1144	0/0:7,0:7:17.03:0,17,393	0/0:9,0:9:14.81:0,15,138	0/0:7,0:6:11.53:0,12,261	0/0:11,0:11:27.36:0,27,618	0/0:16,0:16:34.57:0,35,835	0/0:26,0:24:65.41:0,65,1613	0/0:10,0:9:24.08:0,24,702	0/0:15,0:15:40.32:0,40,704	0/0:11,0:11:29.03:0,29,631	0/0:9,0:8:20.56:0,21,589	0/0:11,0:11:23.53:0,24,297	0/0:21,0:21:37.76:0,38,887	0/0:11,0:9:18.05:0,18,516	0/0:22,0:21:51.05:0,51,1118	0/0:22,0:22:59.64:0,60,1574	0/0:19,0:19:50.98:0,51,991	0/0:6,0:5:9.03:0,9,293
chr10	47117377	.	TGC	T	349.12	PASS	AB=0.970;AC=17;AF=0.304;AN=56;BaseQRankSum=10.267;DP=714;FS=12.868;HRun=0;HaplotypeScore=242.6568;InbreedingCoeff=-0.2195;MQ=44.05;MQ0=12;MQRankSum=-9.164;QD=0.95;ReadPosRankSum=5.732;VQSLOD=0.8162;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:38.65:0,39,317	0/1:8,0:8:0.83:1,0,63	0/0:34,0:14:36:0,36,473	0/0:36,0:16:39.13:0,39,594	0/0:25,0:25:16.76:0,17,133	0/0:18,0:18:5.13:0,5,154	0/1:24,10:28:18.79:74,0,19	0/0:26,0:26:35.21:0,35,335	0/1:25,0:25:50.34:54,0,50	0/1:29,0:29:33.13:33,0,253	0/0:20,1:21:1.97:0,2,174	0/1:34,0:34:43.60:44,0,179	0/1:27,0:28:52.33:52,0,176	0/1:24,0:24:9.38:9,0,107	0/1:17,1:18:0.67:29,0,1	0/1:20,0:21:8.09:8,0,142	0/0:32,0:31:10.33:0,10,329	0/1:15,1:15:40.80:41,0,153	0/0:11,0:10:8.74:0,9,94	0/0:18,0:18:24.48:0,24,182	0/0:51,0:51:33.19:0,33,249	0/1:24,0:24:13.21:34,0,13	0/1:22,0:22:42.52:43,0,91	0/1:34,1:35:14.42:35,0,14	0/1:14,0:13:1.40:1,0,139	0/1:27,0:27:8.61:9,0,327	0/0:23,0:23:0.56:0,1,215	1/1:8,0:8:7.87:31,8,0
chr10	47117379	.	C	CGT	2725.91	PASS	AB=0.990;AC=32;AF=0.571;AN=56;BaseQRankSum=-7.053;DP=733;FS=0.000;HRun=0;HaplotypeScore=254.8599;InbreedingCoeff=0.2798;MQ=44.30;MQ0=11;MQRankSum=2.329;QD=5.22;ReadPosRankSum=-7.818;VQSLOD=0.3888;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:53,1:54:50.40:50,0,96	0/0:8,0:8:10.78:0,11,52	0/0:32,0:13:23.44:0,23,297	0/0:36,0:17:36.02:0,36,490	1/1:24,0:24:0.39:4,0,0	1/1:13,4:18:17.52:195,18,0	1/1:32,3:30:1.09:159,1,0	1/1:31,0:31:35.99:433,36,0	0/1:25,0:25:16.92:29,0,17	0/1:32,0:32:13.08:151,0,13	0/1:21,0:21:9.62:15,0,10	0/0:34,0:34:3.37:0,3,24	0/1:28,0:28:16.63:17,0,25	1/1:25,0:24:5.96:114,6,0	0/0:18,0:18:5.55:0,6,13	0/1:20,0:20:3.70:4,0,23	1/1:34,1:34:11.18:184,11,0	1/1:17,0:16:16.67:148,17,0	0/1:10,0:9:31.99:32,0,33	1/1:15,0:15:23.98:224,24,0	1/1:48,0:48:28.86:291,29,0	0/0:26,0:26:8.45:0,8,22	0/0:22,0:22:7.21:0,7,21	0/0:35,0:35:7.85:0,8,24	0/1:15,1:15:23.59:30,0,24	1/1:29,1:30:20.94:358,21,0	1/1:25,0:25:50.63:449,51,0	1/1:12,0:12:3.91:21,4,0
chr10	47117381	.	TGC	T	8083.75	PASS	AB=0.735;AC=47;AF=0.839;AN=56;BaseQRankSum=5.535;DP=733;FS=0.576;HRun=0;HaplotypeScore=228.8865;InbreedingCoeff=0.1833;MQ=45.07;MQ0=13;MQRankSum=-0.248;QD=11.48;ReadPosRankSum=8.241;VQSLOD=4.1042;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:24,31:55:68.47:868,68,0	0/1:2,4:8:2.92:107,0,3	0/0:29,0:10:23.44:0,23,324	0/1:36,0:17:0.04:0,0,561	1/1:7,14:23:14.27:110,14,0	0/1:6,10:16:10.22:75,0,10	1/1:31,7:32:10.82:278,11,0	0/1:24,7:31:69.31:295,0,69	1/1:8,17:25:47.82:446,48,0	0/1:21,10:32:16.89:505,0,17	1/1:10,8:21:8.16:234,8,0	1/1:12,20:33:62.23:534,62,0	1/1:13,14:27:48.65:425,49,0	1/1:13,11:24:44.58:349,45,0	1/1:2,8:18:14.96:155,15,0	1/1:11,7:21:46.69:344,47,0	1/1:28,5:34:31.79:333,32,0	1/1:13,4:16:33.04:270,33,0	0/1:9,3:10:35.22:51,0,35	1/1:10,3:14:23.95:233,24,0	1/1:11,4:51:34.58:326,35,0	1/1:0,26:26:29.80:264,30,0	1/1:8,13:22:38.60:308,39,0	1/1:4,31:37:23.76:186,24,0	1/1:11,4:15:20.76:156,21,0	1/1:22,7:30:44.53:497,45,0	1/1:14,8:23:60.65:673,61,0	0/1:4,3:12:59.67:65,0,60
chr10	47117385	.	TGCGTGC	T	10329.34	PASS	AB=0.876;AC=40;AF=0.714;AN=56;BaseQRankSum=-1.938;DP=739;FS=1.432;HRun=0;HaplotypeScore=259.0631;InbreedingCoeff=-0.0074;MQ=44.05;MQ0=13;MQRankSum=-3.252;QD=15.33;ReadPosRankSum=2.728;VQSLOD=4.1440;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:52,0:53:38.17:186,0,38	1/1:6,3:9:21.05:309,21,0	0/0:28,0:9:20.87:0,21,209	0/0:35,0:19:22.93:0,23,439	0/1:12,1:23:1.26:156,0,1	0/1:16,0:16:14.53:15,0,109	0/1:37,0:31:3.41:70,0,3	0/1:20,0:28:30.31:597,0,30	1/1:13,14:27:34.46:739,34,0	0/1:22,0:32:5.68:769,0,6	1/1:16,0:22:0.52:341,1,0	1/1:16,18:34:51.47:873,51,0	1/1:17,9:26:56.61:813,57,0	1/1:16,0:26:45.74:655,46,0	1/1:14,6:20:3.95:177,4,0	1/1:18,4:22:44.94:627,45,0	1/1:31,0:36:26.08:583,26,0	1/1:12,0:14:30.51:217,31,0	0/1:9,0:8:43.89:44,0,60	0/1:12,0:13:8.11:8,0,96	0/1:51,0:51:13.08:13,0,264	0/1:17,12:29:0.81:439,0,1	1/1:12,11:23:42.13:640,42,0	1/1:29,8:37:3.92:308,4,0	1/1:12,0:15:29.92:387,30,0	1/1:21,0:29:66.58:904,67,0	0/1:24,0:25:99:403,0,148	0/1:10,0:13:45.83:57,0,46
chr10	47117389	.	TGC	T	6907.26	PASS	AB=1.000;AC=46;AF=0.821;AN=56;BaseQRankSum=7.468;DP=746;FS=4.111;HRun=0;HaplotypeScore=238.3892;InbreedingCoeff=0.1956;MQ=44.85;MQ0=15;MQRankSum=-1.676;QD=10.10;ReadPosRankSum=7.890;VQSLOD=3.7215;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:50,0:50:61.83:792,62,0	1/1:9,0:9:20.79:155,21,0	0/0:24,0:7:17.81:0,18,136	0/0:38,0:19:18.55:0,19,266	1/1:25,0:25:8.09:141,8,0	0/1:15,0:15:11.87:18,0,12	1/1:36,0:30:7.72:176,8,0	0/1:28,0:28:55.36:310,0,55	1/1:26,1:27:33.89:374,34,0	0/1:33,0:33:15.29:503,0,15	1/1:21,1:22:7.63:217,8,0	1/1:32,1:33:48.16:426,48,0	1/1:26,1:27:47.52:344,48,0	1/1:29,0:28:47.31:369,47,0	0/1:21,0:21:35.15:51,0,35	1/1:23,1:24:27.67:320,28,0	1/1:34,0:33:13.96:304,14,0	1/1:15,0:14:32.26:259,32,0	1/1:14,0:12:2.22:81,2,0	1/1:15,0:15:21.01:137,21,0	1/1:52,0:52:33.95:210,34,0	1/1:31,0:31:1.66:203,2,0	1/1:22,0:22:38.52:297,39,0	0/1:39,0:39:21.24:135,0,21	1/1:16,0:15:27.45:223,27,0	1/1:28,0:28:39.11:434,39,0	1/1:25,0:25:48.76:365,49,0	0/1:14,0:14:61.85:62,0,73
chr10	47117518	.	CTTG	C	6394.01	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-5.079;DP=771;FS=4.162;HRun=0;HaplotypeScore=213.0927;InbreedingCoeff=0.9994;MQ=79.50;MQ0=0;MQRankSum=-4.293;QD=37.61;ReadPosRankSum=0.364;VQSLOD=5.2685;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,46:53:99:2144,132,0	0/0:10,0:10:27.09:0,27,581	0/0:21,0:21:45.15:0,45,962	0/0:26,0:26:69.06:0,69,1422	0/0:20,0:20:60.21:0,60,1339	0/0:20,0:20:57.19:0,57,928	0/0:31,0:30:87.30:0,87,1459	0/0:31,0:31:87.30:0,87,1943	0/0:32,0:32:93.32:0,93,2053	0/0:36,0:36:99:0,105,2163	0/0:13,0:13:39.13:0,39,871	0/0:36,0:36:99:0,108,2354	0/0:31,0:31:90.31:0,90,1986	0/0:34,0:34:99:0,102,2267	0/0:25,0:25:69.22:0,69,1467	0/0:29,0:29:78.27:0,78,1739	0/0:38,0:37:99:0,111,2473	0/0:14,0:14:36.12:0,36,797	1/1:7,17:24:48.16:781,48,0	1/1:0,14:14:30.02:433,30,0	1/1:3,36:39:90.31:1469,90,0	0/0:17,0:17:51.17:0,51,1113	0/0:27,0:27:81.28:0,81,1783	0/0:44,0:44:96.33:0,96,2139	0/0:24,0:24:69.24:0,69,1519	0/0:32,0:32:90.30:0,90,1968	1/1:3,37:40:96.33:1567,96,0	0/0:10,0:10:27.09:0,27,603
chr10	47118346	.	ATCTCTCTCTCTC	A	643.52	PASS	AB=0.980;AC=13;AF=0.310;AN=42;BaseQRankSum=1.954;DP=471;FS=15.320;HRun=0;HaplotypeScore=156.9089;InbreedingCoeff=0.4643;MQ=70.88;MQ0=12;MQRankSum=-1.527;QD=5.07;ReadPosRankSum=2.740;VQSLOD=1.4705;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:21,0:21:14.56:54,0,15	0/0:10,0:10:3.01:0,3,173	./.	./.	./.	0/0:20,0:20:18.02:0,18,450	0/1:22,0:22:15.97:16,0,109	0/0:24,0:23:4.96:0,5,14	0/0:13,0:13:9.03:0,9,158	1/1:14,0:16:5.70:107,6,0	./.	0/0:21,0:19:12.03:0,12,216	0/0:13,0:13:12.04:0,12,418	1/1:12,2:15:6.02:166,6,0	0/0:18,0:18:9.03:0,9,370	0/0:17,0:17:18.05:0,18,451	1/1:8,4:11:3.01:101,3,0	1/1:9,1:9:9.86:154,10,0	0/0:18,0:17:12.04:0,12,648	0/0:12,0:11:3:0,3,25	0/0:28,0:28:21.07:0,21,690	./.	./.	0/0:17,0:16:8.95:0,9,133	./.	1/1:13,0:14:5.22:151,5,0	0/0:17,0:16:14.66:0,15,396	0/1:15,0:13:0.03:34,0,0
chr10	47118393	.	T	TCACA	1543.22	PASS	AB=0.958;AC=23;AF=0.426;AN=54;BaseQRankSum=5.871;DP=392;FS=0.000;HRun=0;HaplotypeScore=96.6477;InbreedingCoeff=-0.0940;MQ=37.87;MQ0=22;MQRankSum=-0.837;QD=5.72;ReadPosRankSum=-0.606;VQSLOD=1.9591;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:21:11.36:33,0,11	0/1:2,0:2:31.68:32,0,32	0/0:6,0:3:5.94:0,6,100	0/0:14,0:3:6.02:0,6,68	0/1:13,0:13:0:0,0,0	0/0:26,0:25:32.79:0,33,430	0/0:19,0:19:22.84:0,23,265	0/0:13,0:11:10.17:0,10,170	0/1:10,0:9:0.62:91,0,1	0/1:16,0:14:81.34:187,0,81	0/1:9,0:9:0:0,0,0	1/1:14,0:13:12.65:187,13,0	0/1:9,0:16:42.65:43,0,111	1/1:16,0:16:15.03:194,15,0	0/1:12,0:11:38.91:39,0,41	1/1:20,0:17:7.02:121,7,0	0/1:17,0:14:6.59:170,0,7	0/1:10,0:8:6.12:159,0,6	0/1:11,0:11:90.95:91,0,102	1/1:7,0:5:2.74:50,3,0	0/1:16,9:27:47.08:96,0,47	0/0:10,0:9:0.47:0,0,1	0/0:8,0:5:3.01:0,3,40	0/0:20,0:19:3.27:0,3,9	./.	0/1:14,0:12:50.14:50,0,104	0/1:16,0:13:40.90:82,0,41	0/1:13,0:9:11.03:70,0,11
chr10	47118395	.	T	TCACACA	4368.51	PASS	AB=1.000;AC=42;AF=0.778;AN=54;BaseQRankSum=0.199;DP=462;FS=16.383;HRun=0;HaplotypeScore=136.2357;InbreedingCoeff=0.4154;MQ=37.09;MQ0=21;MQRankSum=-4.478;QD=11.29;ReadPosRankSum=-2.458;VQSLOD=2.4311;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:24:5.60:97,6,0	1/1:3,0:2:3.01:57,3,0	0/1:8,0:3:14.76:15,0,112	0/0:17,0:5:6.02:0,6,87	0/1:18,0:18:0:0,0,0	0/0:25,0:24:8.28:0,8,248	0/1:20,0:20:35.87:36,0,156	1/1:22,0:20:30.07:500,30,0	1/1:12,0:11:15.02:233,15,0	1/1:20,0:18:28.03:428,28,0	0/1:11,0:11:0:0,0,0	1/1:15,0:14:15.05:295,15,0	1/1:21,0:20:5.87:115,6,0	1/1:19,0:19:15.05:306,15,0	1/1:16,0:15:6.02:123,6,0	1/1:22,0:19:11.72:173,12,0	1/1:18,0:15:18.03:346,18,0	1/1:16,0:14:25.17:435,25,0	1/1:14,0:14:28.43:379,28,0	1/1:8,0:6:3.01:75,3,0	1/1:30,0:28:10.26:182,10,0	0/0:12,0:11:0.47:0,0,1	0/0:10,0:7:3.01:0,3,57	1/1:15,0:21:0.47:1,0,0	./.	1/1:16,0:15:20.35:315,20,0	1/1:8,8:14:6.64:133,7,0	1/1:12,0:9:8.24:123,8,0
chr10	47120194	.	A	AC	7220.70	PASS	AB=0.667;AC=37;AF=0.661;AN=56;BaseQRankSum=-5.854;DP=516;FS=13.586;HRun=8;HaplotypeScore=126.1753;InbreedingCoeff=0.8686;MQ=73.75;MQ0=0;MQRankSum=-8.388;QD=23.83;ReadPosRankSum=0.185;VQSLOD=3.3975;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:65.84:0,66,578	1/1:3,2:5:15:149,15,0	0/0:12,0:12:26.99:0,27,244	0/0:14,0:15:20.20:0,20,164	0/1:6,6:12:55.18:171,0,55	0/0:20,0:19:54.01:0,54,490	0/0:30,0:30:75.01:0,75,675	1/1:10,8:18:5.63:319,6,0	1/1:4,10:14:36.09:406,36,0	1/1:8,8:16:11.64:380,12,0	1/1:2,3:5:9.02:95,9,0	1/1:9,12:21:36.07:400,36,0	1/1:6,8:13:18.05:208,18,0	1/1:4,20:24:63.09:688,63,0	1/1:5,13:18:42.12:484,42,0	1/1:2,18:20:54.12:608,54,0	1/1:14,10:24:20.64:467,21,0	1/1:6,8:13:29.92:324,30,0	0/0:15,0:15:33.02:0,33,302	0/0:18,0:18:32.98:0,33,301	0/0:48,0:48:99:0,108,987	1/1:7,6:13:33.07:356,33,0	1/1:5,6:11:18.05:208,18,0	1/1:6,10:17:32.87:328,33,0	1/1:9,16:25:68.85:767,69,0	1/1:10,17:27:72.19:806,72,0	0/0:20,0:20:41.99:0,42,379	1/1:4,1:5:6:57,6,0
chr10	47120222	.	TC	T	16375.91	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=1.727;DP=516;FS=1.890;HRun=1;HaplotypeScore=124.9552;InbreedingCoeff=0.9541;MQ=71.31;MQ0=0;MQRankSum=-6.817;QD=33.22;ReadPosRankSum=4.923;VQSLOD=4.5426;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,39:39:93.30:1195,93,0	1/1:0,5:5:12.04:157,12,0	0/0:11,0:11:30.06:0,30,428	0/0:12,0:12:29.90:0,30,403	1/1:0,12:12:30.06:373,30,0	1/1:1,23:24:67.41:819,67,0	1/1:0,32:32:93.05:1152,93,0	1/1:2,14:16:45.14:569,45,0	1/1:0,10:10:30.10:384,30,0	1/1:1,16:17:51.16:646,51,0	1/1:1,6:7:12.92:158,13,0	1/1:1,22:23:63.09:777,63,0	1/1:0,10:10:26.92:299,27,0	1/1:2,18:20:54.18:705,54,0	1/1:1,18:19:46.03:579,46,0	1/1:0,13:13:39.13:511,39,0	1/1:1,22:23:60.19:763,60,0	1/1:0,17:17:38.92:506,39,0	1/1:1,21:22:66.21:841,66,0	1/1:0,13:13:36.12:462,36,0	1/1:0,47:47:99:1548,120,0	1/1:0,14:14:36.12:469,36,0	1/1:1,10:11:23.74:262,24,0	1/1:2,20:22:43.61:531,44,0	1/1:1,21:22:60.11:760,60,0	1/1:0,31:31:90.29:1156,90,0	1/1:0,20:20:51.05:610,51,0	1/1:0,4:4:12.03:143,12,0
chr10	47120347	.	ACTTCGTAGC	A	23038.54	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=6.571;DP=480;FS=20.486;HRun=0;HaplotypeScore=142.9788;InbreedingCoeff=0.9207;MQ=68.81;MQ0=0;MQRankSum=-9.167;QD=51.77;ReadPosRankSum=5.471;VQSLOD=3.2634;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:9,28:37:57.20:1639,57,0	1/1:1,5:6:12.04:346,12,0	0/0:18,0:18:47.10:0,47,1672	0/0:17,0:17:48.12:0,48,1890	1/1:1,12:13:18.06:453,18,0	1/1:2,20:22:45.15:1326,45,0	1/1:4,22:26:33.11:988,33,0	1/1:2,16:18:48.07:1131,48,0	1/1:3,17:20:39.13:1171,39,0	1/1:2,10:12:33.11:957,33,0	1/1:1,8:9:15.05:418,15,0	1/1:3,22:25:57.20:1644,57,0	1/1:2,7:8:12.04:363,12,0	1/1:1,18:19:30.10:868,30,0	1/1:1,12:13:27.09:823,27,0	1/1:0,8:8:15.05:457,15,0	1/1:1,24:25:36.12:972,36,0	1/1:4,12:16:21.07:590,21,0	1/1:3,19:22:57.18:1486,57,0	1/1:1,14:15:21.07:622,21,0	1/1:3,23:26:27.09:785,27,0	1/1:3,10:13:21.54:598,22,0	1/1:0,8:8:15.01:382,15,0	1/1:2,10:12:12.04:365,12,0	1/1:1,12:13:27.09:789,27,0	1/1:3,18:21:51.07:1303,51,0	1/1:4,22:27:57.04:1742,57,0	1/1:2,8:10:27.09:822,27,0
chr10	47121630	.	GACTCTGTA	G	1631.09	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.446;DP=674;FS=5.922;HRun=0;HaplotypeScore=166.8766;InbreedingCoeff=0.9916;MQ=83.05;MQ0=0;MQRankSum=-7.570;QD=36.25;ReadPosRankSum=0.691;VQSLOD=3.1986;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,126,5458	0/0:11,0:11:33.11:0,33,1487	0/0:21,0:21:60.21:0,60,2451	0/0:18,0:18:54.18:0,54,2248	0/0:17,0:17:51.18:0,51,2174	1/1:0,11:11:15.05:437,15,0	1/1:3,31:34:45.15:1312,45,0	0/0:31,0:31:90.31:0,90,3558	0/0:18,0:18:54.19:0,54,2379	0/0:23,0:23:69.24:0,69,2872	0/0:15,0:15:42.14:0,42,1861	0/0:14,0:14:39.13:0,39,1520	0/0:26,0:26:78.27:0,78,3275	0/0:26,0:26:78.27:0,78,3466	0/0:27,0:27:81.28:0,81,3430	0/0:15,0:15:45.14:0,45,1828	0/0:42,0:42:99:0,120,5339	0/0:34,0:34:96.33:0,96,4197	0/0:17,0:17:48.14:0,48,1850	0/0:18,0:18:54.19:0,54,2327	0/0:58,0:58:99:0,172,6935	0/0:27,0:27:81.26:0,81,3277	0/0:22,0:22:63.22:0,63,2749	0/0:30,0:30:90.24:0,90,3733	0/0:18,0:18:51.18:0,51,2094	0/0:27,0:27:81.26:0,81,3377	0/0:15,0:15:45.15:0,45,1931	0/0:16,0:16:48.16:0,48,2153
chr10	47121872	.	GC	G	5780.28	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=12.557;DP=727;FS=3.469;HRun=1;HaplotypeScore=74.3042;InbreedingCoeff=0.9993;MQ=82.28;MQ0=0;MQRankSum=-2.979;QD=39.32;ReadPosRankSum=1.288;VQSLOD=5.5977;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,44:44:99:1697,123,0	0/0:8,0:8:24.08:0,24,383	0/0:21,0:21:60.03:0,60,889	0/0:19,0:19:36.11:0,36,532	0/0:20,0:20:60.20:0,60,954	0/0:24,0:24:72.18:0,72,1120	0/0:36,0:36:99:0,108,1721	0/0:27,0:27:78.25:0,78,1187	0/0:27,0:27:78.25:0,78,1223	0/0:31,0:31:87.29:0,87,1363	0/0:19,0:19:57.19:0,57,911	0/0:40,0:40:99:0,120,1864	0/0:32,0:32:93.32:0,93,1482	0/0:31,0:31:93.32:0,93,1485	0/0:35,0:35:99:0,105,1606	0/0:27,0:27:78.25:0,78,1222	0/0:35,0:35:99:0,105,1630	0/0:23,0:23:69.24:0,69,1103	1/1:1,24:25:75.21:1022,75,0	1/1:0,11:11:33.11:461,33,0	1/1:0,44:44:99:1719,123,0	0/0:22,0:22:66.21:0,66,1032	0/0:21,0:21:63.21:0,63,1006	0/0:29,0:29:87.24:0,87,1332	0/0:18,0:18:51.17:0,51,815	0/0:25,0:25:69.24:0,69,1103	1/1:0,23:23:63.21:880,63,0	0/0:10,0:10:30.10:0,30,479
chr10	47124227	.	GA	G	16174.25	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=9.199;DP=709;FS=0.282;HRun=1;HaplotypeScore=96.5344;InbreedingCoeff=0.9952;MQ=85.66;MQ0=0;MQRankSum=-4.167;QD=38.24;ReadPosRankSum=3.495;VQSLOD=5.1556;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,138,2124	1/1:0,5:5:12.04:168,12,0	0/0:25,0:25:65.79:0,66,999	0/0:23,0:23:65.35:0,65,922	1/1:0,24:24:66.22:921,66,0	0/0:31,0:31:93.30:0,93,1452	0/0:27,0:27:81.25:0,81,1239	1/1:0,28:28:83.99:1081,84,0	1/1:0,23:23:69.19:941,69,0	1/1:0,20:20:60.20:837,60,0	1/1:0,13:13:36.12:503,36,0	1/1:0,25:25:69.23:963,69,0	1/1:0,23:23:66.22:896,66,0	1/1:0,20:20:60.20:837,60,0	1/1:0,30:30:84.28:1172,84,0	1/1:0,21:21:60.20:832,60,0	1/1:0,49:49:99:1757,126,0	1/1:0,18:18:51.17:713,51,0	0/0:20,0:20:57.19:0,57,901	0/0:34,0:34:99:0,99,1558	0/0:54,0:54:99:0,163,2536	1/1:0,16:16:45.15:629,45,0	1/1:1,20:21:53.93:722,54,0	1/1:0,34:34:78.25:1085,78,0	1/1:0,16:16:45.15:629,45,0	1/1:0,21:21:63.19:861,63,0	0/0:26,0:26:75.26:0,75,1198	1/1:0,16:16:45.15:627,45,0
chr10	47124364	.	A	ACCCCTG	23313.55	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-10.363;DP=572;FS=0.343;HRun=0;HaplotypeScore=119.5130;InbreedingCoeff=0.9732;MQ=74.83;MQ0=0;MQRankSum=-14.347;QD=67.38;ReadPosRankSum=0.192;VQSLOD=5.1888;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:93.22:0,93,2034	1/1:0,6:9:15.05:532,15,0	0/0:19,0:19:49.71:0,50,1001	0/0:15,0:15:5.48:0,5,497	1/1:3,10:18:18.06:500,18,0	0/0:21,0:21:57.20:0,57,1340	0/0:25,0:25:75.22:0,75,1654	1/1:3,25:36:99:2781,99,0	1/1:0,16:19:39.06:1383,39,0	1/1:3,12:17:41.77:1076,42,0	1/1:2,13:17:27.09:924,27,0	1/1:3,19:23:48.16:1701,48,0	1/1:5,15:21:51.18:1765,51,0	1/1:2,14:18:42.14:1456,42,0	1/1:5,26:33:69.24:2446,69,0	1/1:3,16:20:51.18:1767,51,0	1/1:4,9:14:21.07:745,21,0	1/1:3,12:16:36.12:1143,36,0	0/0:24,0:24:66.21:0,66,1452	0/0:14,0:14:42.14:0,42,948	0/0:36,0:36:96.30:0,96,2119	1/1:1,13:15:21.07:646,21,0	1/1:0,10:10:15.01:446,15,0	1/1:6,8:15:21.03:596,21,0	1/1:1,14:18:39.13:1310,39,0	1/1:2,13:18:44.95:1245,45,0	0/0:37,0:37:99:0,102,2247	1/1:0,8:9:24.08:850,24,0
chr10	47124481	.	ATATATAAC	A	1335.36	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.844;DP=608;FS=6.263;HRun=0;HaplotypeScore=202.0274;InbreedingCoeff=0.9524;MQ=62.56;MQ0=0;MQRankSum=-6.591;QD=39.28;ReadPosRankSum=-0.632;VQSLOD=2.8858;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,27:34:54.65:1430,55,0	0/0:8,0:8:24.08:0,24,1045	0/0:7,0:7:18.52:0,19,540	0/0:5,0:5:11.01:0,11,118	0/0:28,0:28:78.25:0,78,3058	0/0:28,0:28:72.25:0,72,3026	0/0:16,0:16:42.14:0,42,1751	0/0:42,0:42:99:0,114,4369	0/0:16,0:16:45.15:0,45,1801	0/0:26,0:26:78.27:0,78,3363	0/0:21,0:21:60.21:0,60,2423	0/0:15,0:15:45.15:0,45,1799	0/0:17,0:17:45.15:0,45,1838	0/0:12,0:12:33.11:0,33,1376	0/0:29,0:29:78.27:0,78,3193	0/0:21,0:21:63.15:0,63,2225	0/0:26,0:26:72.25:0,72,2917	0/0:18,0:18:45.14:0,45,1689	0/0:19,0:19:48.16:0,48,1897	0/0:30,0:30:90.30:0,90,3445	0/0:31,0:31:84.27:0,84,3300	0/0:20,0:20:60.21:0,60,2558	0/0:29,0:29:81.28:0,81,3449	0/0:13,0:13:23.92:0,24,889	0/0:22,0:22:63.17:0,63,2512	0/0:23,0:23:66.23:0,66,2704	0/0:37,0:37:99:0,105,4072	0/0:15,0:15:42.14:0,42,1818
chr10	47124601	.	TTATCTATCTATC	T	3517.13	PASS	AB=0.606;AC=19;AF=0.352;AN=54;BaseQRankSum=4.042;DP=715;FS=13.021;HRun=0;HaplotypeScore=234.4574;InbreedingCoeff=0.7334;MQ=58.80;MQ0=35;MQRankSum=-5.247;QD=17.07;ReadPosRankSum=0.350;VQSLOD=1.3651;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:70.66:0,71,3422	0/0:6,0:10:9.03:0,9,471	./.	0/0:45,0:12:0:0,0,0	1/1:12,15:27:15.04:264,15,0	0/0:12,0:28:51.18:0,51,1336	0/0:9,0:16:12.04:0,12,278	1/1:37,0:36:8.95:82,9,0	0/0:16,0:19:9.03:0,9,197	1/1:13,10:23:27.07:628,27,0	1/1:13,9:22:11.83:363,12,0	0/0:13,0:14:15.05:0,15,680	0/0:20,0:25:2.18:0,2,33	1/1:6,10:16:21.07:558,21,0	0/0:16,0:29:45.15:0,45,1936	0/0:19,0:28:21.06:0,21,610	1/1:6,3:9:3.01:102,3,0	1/1:20,6:26:2.96:98,3,0	0/0:12,0:12:15.05:0,15,783	0/0:33,0:33:57.18:0,57,2586	0/0:20,0:22:42.14:0,42,1987	0/0:24,0:24:30.09:0,30,1358	0/0:17,0:30:39.13:0,39,1577	0/0:22,0:25:38.36:0,38,1848	1/1:7,7:14:3.01:102,3,0	0/1:7,13:20:17.08:1121,0,17	0/0:46,0:46:93.31:0,93,4139	1/1:12,0:12:12.04:198,12,0
chr10	47125080	.	TC	T	19049.70	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=0.445;DP=600;FS=2.239;HRun=3;HaplotypeScore=68.0110;InbreedingCoeff=0.9875;MQ=73.98;MQ0=0;MQRankSum=-8.326;QD=34.08;ReadPosRankSum=6.227;VQSLOD=4.9720;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,22:24:66.14:799,66,0	1/1:0,9:9:18.06:223,18,0	0/0:19,0:19:51.17:0,51,716	0/0:22,0:22:57.14:0,57,775	1/1:0,23:23:63.05:741,63,0	1/1:0,27:27:81.25:1002,81,0	1/1:4,15:19:51.14:608,51,0	1/1:0,34:34:99:1250,102,0	1/1:1,22:23:63.20:781,63,0	1/1:2,27:29:84.26:1041,84,0	1/1:0,10:10:30.09:372,30,0	1/1:0,22:22:66.21:818,66,0	1/1:0,12:12:36.11:446,36,0	1/1:0,24:24:66.21:818,66,0	1/1:0,22:22:57.18:707,57,0	1/1:1,22:23:63.20:781,63,0	1/1:2,30:32:81.25:1004,81,0	1/1:1,25:26:69.22:855,69,0	1/1:0,18:18:54.13:631,54,0	1/1:0,25:25:72.23:891,72,0	1/1:0,19:19:57.18:706,57,0	1/1:3,23:26:75.18:895,75,0	1/1:0,22:22:63.20:781,63,0	1/1:0,17:17:51.16:632,51,0	1/1:0,18:18:48.15:595,48,0	1/1:0,18:18:54.17:669,54,0	1/1:2,28:30:66.20:818,66,0	1/1:0,7:7:15.05:186,15,0
chr10	47125101	.	AC	A	1451.27	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.251;DP=604;FS=2.963;HRun=2;HaplotypeScore=114.3175;InbreedingCoeff=0.9801;MQ=69.79;MQ0=0;MQRankSum=-9.099;QD=33.75;ReadPosRankSum=0.366;VQSLOD=3.2893;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:81.27:0,81,1213	0/0:8,0:8:18.05:0,18,251	0/0:22,0:22:57.17:0,57,792	0/0:22,0:22:63.19:0,63,872	0/0:22,0:22:66.22:0,66,980	1/1:1,24:25:69.22:894,69,0	1/1:0,18:18:54.11:679,54,0	0/0:29,0:29:87.27:0,87,1251	0/0:25,0:25:72.24:0,72,1079	0/0:30,0:29:87.29:0,87,1276	0/0:12,0:12:36.12:0,36,537	0/0:21,0:21:60.20:0,60,899	0/0:12,0:12:36.12:0,36,538	0/0:21,0:21:60.19:0,60,880	0/0:20,0:20:51.16:0,51,746	0/0:24,0:24:69.22:0,69,1013	0/0:31,0:31:87.28:0,87,1284	0/0:31,0:31:81.23:0,81,1188	0/0:18,0:18:51.16:0,51,743	0/0:27,0:27:81.27:0,81,1212	0/0:17,0:17:51.14:0,51,721	0/0:26,0:26:78.25:0,78,1146	0/0:25,0:25:72.22:0,72,1039	0/0:18,0:18:51.17:0,51,764	0/0:19,0:19:57.19:0,57,854	0/0:17,0:17:45.15:0,45,670	0/0:30,0:30:75.24:0,75,1104	0/0:6,0:6:12.02:0,12,159
chr10	47125611	.	AAAC	A	340.26	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.015;DP=625;FS=0.000;HRun=0;HaplotypeScore=92.6246;InbreedingCoeff=0.9873;MQ=68.70;MQ0=9;MQRankSum=-3.067;QD=24.30;ReadPosRankSum=-0.374;VQSLOD=3.4191;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,9:14:30.06:435,30,0	0/0:7,0:7:21.07:0,21,438	0/0:36,0:22:43.24:0,43,658	0/0:66,0:33:38.81:0,39,714	0/0:25,0:25:72.18:0,72,1371	0/0:21,0:21:60.17:0,60,1182	0/0:23,0:23:63.20:0,63,1259	0/0:29,0:29:78.26:0,78,1604	0/0:19,0:19:57.13:0,57,1086	0/0:29,0:29:75.24:0,75,1494	0/0:26,0:26:75.24:0,75,1528	0/0:10,0:10:21.07:0,21,438	0/0:14,0:14:42.13:0,42,810	0/0:13,0:13:33.11:0,33,702	0/0:11,0:11:30.09:0,30,599	0/0:23,0:23:60.15:0,60,1189	0/0:21,0:21:30.86:0,31,942	0/0:32,0:32:87.19:0,87,1721	0/0:26,0:26:66.14:0,66,1094	0/0:30,0:29:69.22:0,69,1429	0/0:15,0:15:45.03:0,45,845	0/0:13,0:13:39.13:0,39,812	0/0:30,0:30:87.30:0,87,1807	0/0:14,0:14:29.07:0,29,455	0/0:11,0:11:33.10:0,33,663	0/0:29,0:29:84.28:0,84,1717	0/0:29,0:29:69.20:0,69,1367	0/0:8,0:8:24.05:0,24,433
chr10	47125629	.	CACAAA	C	519.36	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.812;DP=632;FS=0.999;HRun=0;HaplotypeScore=114.3646;InbreedingCoeff=0.9681;MQ=65.82;MQ0=15;MQRankSum=-2.802;QD=34.62;ReadPosRankSum=-1.297;VQSLOD=3.3256;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,11:15:33.11:614,33,0	0/0:8,0:8:21.04:0,21,456	0/0:57,0:31:33.08:0,33,971	0/0:81,0:29:17.39:0,17,490	0/0:24,0:24:66.23:0,66,1826	0/0:20,0:20:57.20:0,57,1639	0/0:27,0:27:66.17:0,66,1702	0/0:32,0:32:69.24:0,69,1672	0/0:16,0:16:36.12:0,36,972	0/0:27,0:27:69.24:0,69,1928	0/0:26,0:26:63.21:0,63,1512	0/0:9,0:9:21.07:0,21,567	0/0:13,0:13:33.11:0,33,873	0/0:10,0:10:24.08:0,24,704	0/0:10,0:10:24.08:0,24,701	0/0:16,0:16:45.15:0,45,1206	0/0:19,0:19:39.13:0,39,1123	0/0:31,0:31:78.25:0,78,2060	0/0:15,0:15:30.10:0,30,846	0/0:30,0:29:72.25:0,72,1849	0/0:18,0:18:38.95:0,39,999	0/0:15,0:15:33.11:0,33,967	0/0:28,0:28:69.22:0,69,1734	0/0:11,0:11:25.33:0,25,681	0/0:13,0:13:36.12:0,36,1055	0/0:31,0:31:72.25:0,72,2026	0/0:23,0:22:60.20:0,60,1518	0/0:7,0:7:18.06:0,18,429
chr10	47126469	.	G	GT	4251.56	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=0.586;DP=779;FS=0.795;HRun=4;HaplotypeScore=103.1462;InbreedingCoeff=0.9994;MQ=78.28;MQ0=0;MQRankSum=-2.243;QD=37.29;ReadPosRankSum=0.212;VQSLOD=3.6628;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:69.14:0,69,756	0/0:9,0:9:24.03:0,24,258	0/0:24,0:24:51.14:0,51,577	0/0:29,0:29:61.13:0,61,758	0/0:35,0:35:90.25:0,90,1020	0/0:29,0:28:78.22:0,78,885	0/0:29,0:29:72.20:0,72,816	0/0:44,0:44:99:0,105,1167	0/0:25,0:25:69.20:0,69,782	0/0:41,0:41:99:0,111,1231	0/0:28,0:28:75.21:0,75,850	0/0:27,0:27:81.23:0,81,919	0/0:37,0:37:99:0,108,1214	0/0:26,0:26:78.21:0,78,875	0/0:34,0:34:96.24:0,96,1074	0/0:23,0:23:69.17:0,69,761	0/0:20,0:20:54.15:0,54,612	0/0:16,0:16:45.13:0,45,509	1/1:6,18:24:57.19:769,57,0	1/1:1,33:34:96.32:1308,96,0	1/1:0,24:24:69.23:944,69,0	0/0:33,0:33:96.25:0,96,1072	0/0:29,0:29:84.21:0,84,934	0/0:19,0:19:54.15:0,54,612	0/0:30,0:30:87.24:0,87,979	0/0:36,0:36:99:0,108,1201	1/1:0,32:32:90.30:1230,90,0	0/0:17,0:17:48.13:0,48,544
chr10	47126949	.	G	GTTTTT	13257.25	PASS	AB=1.000;AC=43;AF=0.768;AN=56;BaseQRankSum=-4.839;DP=558;FS=13.570;HRun=8;HaplotypeScore=129.1112;InbreedingCoeff=0.8547;MQ=67.93;MQ0=1;MQRankSum=-1.875;QD=30.55;ReadPosRankSum=-0.733;VQSLOD=1.3379;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:87.13:0,87,1315	1/1:0,0:11:23.83:348,24,0	0/1:19,0:15:10.97:11,0,284	0/0:23,0:17:4.18:0,4,246	1/1:3,15:22:50.58:835,51,0	1/1:1,0:21:47.60:196,48,0	1/1:3,0:13:16.07:67,16,0	1/1:21,14:39:80.89:1369,81,0	1/1:2,0:16:12.04:187,12,0	1/1:6,19:30:74.98:1391,75,0	1/1:4,14:21:47.73:758,48,0	1/1:1,0:12:12.04:207,12,0	1/1:4,0:17:18.02:285,18,0	1/1:13,0:14:29.05:342,29,0	1/1:3,1:17:23.78:440,24,0	1/1:5,0:15:12.04:210,12,0	1/1:6,10:17:24.04:533,24,0	1/1:10,10:21:51.12:1184,51,0	0/0:4,0:22:18.70:0,19,331	0/0:4,0:20:34.61:0,35,361	0/0:0,0:11:29.74:0,30,247	1/1:4,0:16:41.78:551,42,0	1/1:2,0:15:23.22:332,23,0	1/1:4,1:28:52:800,52,0	1/1:5,15:24:42.10:1049,42,0	1/1:3,18:24:63.02:1241,63,0	0/0:0,0:17:44.80:0,45,405	1/1:6,10:21:39.09:921,39,0
chr10	47128786	.	A	AAACAACAACAAC	7003.31	PASS	AB=0.656;AC=19;AF=0.352;AN=54;BaseQRankSum=-11.412;DP=621;FS=0.000;HRun=0;HaplotypeScore=220.0180;InbreedingCoeff=0.7944;MQ=63.81;MQ0=2;MQRankSum=-2.609;QD=30.06;ReadPosRankSum=-5.764;VQSLOD=2.3130;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:24:0.14:0,0,687	0/0:1,0:8:21.07:0,21,587	0/0:28,0:22:18.03:0,18,265	./.	1/1:6,16:26:24.08:1019,24,0	0/0:7,0:23:33.11:0,33,877	0/0:6,0:24:47.52:0,48,1109	1/1:24,0:36:57.15:1296,57,0	0/0:11,0:27:47.92:0,48,399	1/1:14,8:30:30.47:1024,30,0	1/1:8,5:19:15.05:639,15,0	0/0:10,0:29:53.85:0,54,424	0/0:5,0:22:21.97:0,22,306	1/1:5,6:16:6.02:349,6,0	0/0:7,0:23:42.14:0,42,1141	0/0:6,0:15:23.94:0,24,188	1/1:10,4:20:13.86:687,14,0	0/1:10,0:21:10.92:293,0,11	0/0:8,0:20:17.73:0,18,426	0/0:4,0:19:23.71:0,24,647	0/0:5,0:19:6.02:0,6,227	0/0:7,0:24:11.39:0,11,279	0/0:13,0:20:20.58:0,21,248	0/0:5,0:18:33.42:0,33,324	1/1:4,5:15:6.02:349,6,0	1/1:10,13:30:53.82:1007,54,0	0/0:4,0:28:36.59:0,37,911	1/1:5,5:19:3.37:342,3,0
chr10	47129195	.	GGT	G	854.21	PASS	AB=0.965;AC=27;AF=0.519;AN=52;BaseQRankSum=-4.127;DP=197;FS=1.632;HRun=0;HaplotypeScore=41.2112;InbreedingCoeff=0.1291;MQ=65.51;MQ0=2;MQRankSum=-0.859;QD=6.37;ReadPosRankSum=-2.420;VQSLOD=2.4478;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:15:22.39:171,22,0	1/1:4,0:4:2.73:26,3,0	0/0:22,0:13:8.04:0,8,280	0/0:16,0:9:1.83:0,2,99	0/0:6,0:5:8.13:0,8,45	0/1:16,2:18:9.13:180,0,9	0/1:6,0:6:8.50:11,0,9	1/1:10,0:10:24.75:183,25,0	0/1:6,0:5:0.90:20,0,1	./.	./.	1/1:3,0:3:2.35:48,2,0	0/0:1,0:1:2.96:0,3,19	0/1:7,0:7:2.77:19,0,3	0/0:5,0:5:8.10:0,8,54	0/0:5,0:5:2.60:0,3,18	0/1:15,0:15:4.34:4,0,43	0/0:2,0:2:2.94:0,3,18	0/1:7,1:7:13.04:59,0,13	0/1:8,1:9:9.85:39,0,10	0/1:7,0:7:9.97:43,0,10	1/1:5,1:6:4.52:30,5,0	1/1:3,0:3:6:53,6,0	1/1:2,0:2:3.85:21,4,0	0/1:6,0:6:4.28:14,0,4	1/1:6,0:6:4.56:73,5,0	0/0:5,0:5:3.61:0,4,19	1/1:3,0:3:3.85:12,4,0
chr10	47129196	.	GT	G	1896	PASS	AC=48;AF=0.889;AN=54;BaseQRankSum=-3.422;DP=193;FS=0.000;HRun=1;HaplotypeScore=35.1977;InbreedingCoeff=0.4517;MQ=66.10;MQ0=2;MQRankSum=1.208;QD=12.15;ReadPosRankSum=-2.193;VQSLOD=1.1190;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,5:15:22.37:153,22,0	1/1:4,0:4:2.56:25,3,0	0/0:20,0:12:13.76:0,14,237	0/0:14,1:9:10.87:0,11,98	1/1:6,0:5:3.31:10,3,0	1/1:16,3:19:46.64:437,47,0	1/1:4,2:6:14.57:139,15,0	1/1:2,8:10:29.87:235,30,0	1/1:6,0:5:6.38:42,6,0	./.	1/1:2,0:2:3:26,3,0	1/1:3,0:3:8.50:63,8,0	0/0:1,0:1:1.55:0,2,4	1/1:6,0:6:7.83:50,8,0	1/1:5,0:5:0.54:23,1,0	1/1:5,0:5:1.25:3,1,0	1/1:14,0:14:19.99:121,20,0	1/1:2,0:2:0.89:2,1,0	1/1:8,0:7:10.20:92,10,0	1/1:7,0:7:11.79:83,12,0	1/1:6,1:7:2.12:46,2,0	1/1:6,0:6:5.70:51,6,0	1/1:3,0:3:6:53,6,0	1/1:2,0:2:5.97:46,6,0	1/1:6,0:6:10.63:64,11,0	1/1:6,0:6:13.83:114,14,0	1/1:5,0:5:9.86:83,10,0	1/1:2,1:3:5.93:59,6,0
chr10	47129203	.	T	TG	794.57	PASS	AB=1.000;AC=25;AF=0.481;AN=52;BaseQRankSum=-0.316;DP=194;FS=13.094;HRun=8;HaplotypeScore=37.5987;InbreedingCoeff=0.4335;MQ=84.36;MQ0=1;MQRankSum=-1.426;QD=6.73;ReadPosRankSum=0.414;VQSLOD=-0.1164;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:16,0:16:0.51:1,0,1	0/0:6,0:6:5.98:0,6,50	0/0:20,0:13:15.43:0,15,130	0/1:18,0:12:15.33:15,0,99	0/0:8,0:7:14.98:0,15,129	1/1:15,2:17:27.57:291,28,0	1/1:4,3:7:10.27:105,10,0	0/0:7,0:7:14.89:0,15,117	1/1:2,3:4:5.85:49,6,0	0/0:2,0:2:2.99:0,3,27	0/0:4,0:4:8.98:0,9,75	1/1:2,3:5:3.01:35,3,0	0/1:3,0:3:5.28:50,0,5	0/1:6,0:6:15.17:16,0,15	0/0:5,0:5:7.56:0,8,36	1/1:1,2:3:3.01:35,3,0	0/0:8,0:8:20.73:0,21,163	0/0:1,0:1:3:0,3,27	1/1:7,1:8:11.86:109,12,0	1/1:5,1:6:11.37:94,11,0	1/1:4,5:9:3.01:35,3,0	1/1:4,1:5:5.91:50,6,0	./.	./.	0/0:7,0:7:14.73:0,15,114	0/0:3,0:3:5.99:0,6,52	1/1:5,2:7:5.99:57,6,0	0/1:3,0:3:21.82:24,0,22
chr10	47129487	.	TG	T	5147.28	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=11.506;DP=675;FS=0.713;HRun=4;HaplotypeScore=66.3025;InbreedingCoeff=0.9960;MQ=60.15;MQ0=1;MQRankSum=-0.300;QD=32.58;ReadPosRankSum=2.350;VQSLOD=5.5140;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,111,1518	0/0:5,0:5:15.05:0,15,210	0/0:33,0:30:81.05:0,81,1029	0/0:35,0:30:84.27:0,84,1144	0/0:14,0:14:39.13:0,39,534	0/0:20,0:20:51.14:0,51,680	0/0:25,0:25:72.24:0,72,1005	0/0:29,0:29:78.26:0,78,1093	1/1:2,22:24:60.18:720,60,0	0/0:23,0:23:69.23:0,69,966	0/0:11,0:11:33.11:0,33,461	1/1:2,29:31:78.24:936,78,0	1/1:0,28:28:81.25:972,81,0	0/0:31,0:31:84.27:0,84,1158	0/0:32,0:32:90.30:0,90,1260	1/1:0,21:21:57.17:684,57,0	0/0:35,0:35:99:0,99,1346	0/0:19,0:19:25.25:0,25,546	0/0:25,0:24:69.23:0,69,954	0/0:19,0:19:54.18:0,54,755	0/0:36,0:36:99:0,108,1507	1/1:0,7:7:21.06:251,21,0	1/1:0,12:12:36.11:432,36,0	1/1:3,32:35:96.29:1152,96,0	0/0:19,0:19:54.14:0,54,718	0/0:24,0:24:69.23:0,69,966	0/0:30,0:30:78.20:0,78,1052	0/0:13,0:13:39.13:0,39,544
chr10	47129822	.	AAGCC	A	19327.12	PASS	AB=0.540;AC=37;AF=0.661;AN=56;BaseQRankSum=13.331;DP=575;FS=1.879;HRun=0;HaplotypeScore=110.2881;InbreedingCoeff=0.9196;MQ=77.11;MQ0=0;MQRankSum=-8.106;QD=52.24;ReadPosRankSum=4.588;VQSLOD=6.1392;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:96.32:0,96,2627	1/1:1,13:14:39.13:770,39,0	0/0:14,0:14:42.14:0,42,1140	0/0:18,0:18:47.86:0,48,1097	1/1:1,23:24:66.23:1318,66,0	0/0:23,0:23:69.22:0,69,1853	0/0:26,0:26:78.27:0,78,2167	1/1:4,28:32:84.28:1604,84,0	1/1:0,17:17:45.15:898,45,0	1/1:0,19:19:57.20:1137,57,0	1/1:0,19:19:51.17:971,51,0	1/1:0,21:21:60.21:1198,60,0	1/1:1,18:19:51.17:995,51,0	1/1:0,20:20:57.20:1138,57,0	1/1:0,19:19:48.16:959,48,0	1/1:0,18:18:51.18:1019,51,0	1/1:1,12:13:27.09:539,27,0	1/1:0,14:14:36.12:719,36,0	0/0:24,0:24:69.24:0,69,1862	0/0:36,0:36:99:0,105,2926	0/0:19,0:19:57.20:0,57,1595	1/1:0,18:18:51.13:950,51,0	0/1:4,23:27:20.35:1135,0,20	1/1:0,15:15:31.85:642,32,0	1/1:0,23:23:66.23:1297,66,0	1/1:0,28:28:84.29:1678,84,0	0/0:13,0:13:39.13:0,39,1077	1/1:0,10:10:18.06:360,18,0
chr10	47130938	.	AC	A	1055.47	PASS	AB=0.942;AC=10;AF=0.179;AN=56;BaseQRankSum=-1.384;DP=392;FS=24.018;HRun=11;HaplotypeScore=66.8977;InbreedingCoeff=0.5429;MQ=91.38;MQ0=0;MQRankSum=-0.454;QD=8.38;ReadPosRankSum=5.630;VQSLOD=0.3993;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:21:26.37:0,26,179	0/0:5,0:5:2.67:0,3,20	0/1:24,0:25:13.05:13,0,190	0/0:14,0:14:5.18:0,5,27	0/0:7,0:7:5.93:0,6,39	0/1:11,1:12:3.59:4,0,147	0/0:21,2:23:20.35:0,20,352	0/0:10,0:11:11.45:0,11,61	0/0:4,0:14:5.96:0,6,45	0/0:7,0:9:8.86:0,9,57	0/0:7,0:7:8.52:0,9,47	0/0:4,0:12:12.20:0,12,93	0/0:9,0:10:14.95:0,15,119	0/0:20,0:20:19.99:0,20,102	0/0:9,0:17:0.63:0,1,16	0/0:6,0:11:14.52:0,15,88	0/0:18,0:18:14.96:0,15,76	0/0:5,0:5:8.64:0,9,48	1/1:5,10:16:25.96:203,26,0	1/1:6,5:13:22.04:159,22,0	1/1:17,21:39:20.95:368,21,0	0/0:7,0:15:8.71:0,9,53	0/0:6,0:9:8.84:0,9,71	0/0:7,0:18:14.64:0,15,105	0/0:5,0:5:5.95:0,6,44	0/0:12,0:12:8.60:0,9,47	1/1:1,20:21:56.93:468,57,0	0/0:2,0:3:8.64:0,9,48
chr10	47132209	.	CT	C	3745.91	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=10.069;DP=627;FS=2.002;HRun=11;HaplotypeScore=67.4479;InbreedingCoeff=0.9926;MQ=78.27;MQ0=1;MQRankSum=-0.652;QD=17.18;ReadPosRankSum=3.986;VQSLOD=4.7215;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:87.65:0,88,906	1/1:0,7:7:20.98:172,21,0	0/0:15,0:12:17.07:0,17,157	0/0:19,0:17:29.85:0,30,261	0/0:21,0:21:52.37:0,52,547	1/1:1,23:24:56.93:468,57,0	1/1:5,18:24:18.12:344,18,0	0/0:28,0:28:66.12:0,66,680	1/1:2,18:20:50.92:419,51,0	0/0:27,0:27:69.16:0,69,723	0/0:18,1:21:23.26:0,23,416	1/1:5,19:25:27.99:375,28,0	1/1:0,11:11:23.97:197,24,0	0/0:15,1:16:17.44:0,17,377	1/1:3,24:27:62.90:517,63,0	1/1:4,15:19:35.95:296,36,0	0/0:26,2:29:59.33:0,59,807	0/0:31,0:34:83.94:0,84,837	0/0:15,1:18:20.36:0,20,396	0/0:35,0:35:90.18:0,90,937	0/0:27,0:27:61.65:0,62,609	1/1:5,15:20:38.17:319,38,0	1/1:2,11:13:26.64:221,27,0	1/1:7,21:28:50.90:419,51,0	0/0:29,0:32:77.66:0,78,753	0/0:22,0:22:60.11:0,60,612	0/0:23,1:24:52.86:0,53,659	0/0:7,0:7:18.03:0,18,184
chr10	47133409	.	TGG	T	15059.68	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=0.962;DP=634;FS=27.694;HRun=10;HaplotypeScore=136.4908;InbreedingCoeff=0.9462;MQ=76.09;MQ0=0;MQRankSum=-4.916;QD=26.99;ReadPosRankSum=7.740;VQSLOD=2.5876;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:35:63.49:0,63,647	1/1:2,15:17:42.01:468,42,0	0/0:20,0:19:46.31:0,46,601	0/0:18,0:20:4.32:0,4,372	1/1:2,16:18:45.12:501,45,0	1/1:0,19:19:51.14:567,51,0	1/1:4,22:26:62.15:699,62,0	1/1:5,22:27:62.76:683,63,0	1/1:3,20:23:60.13:668,60,0	1/1:4,24:28:71.98:793,72,0	1/1:3,17:20:42.08:465,42,0	1/1:2,13:15:39.03:435,39,0	1/1:1,26:27:72.16:802,72,0	1/1:3,15:18:45.06:501,45,0	1/1:0,26:26:75.20:834,75,0	1/1:1,24:25:63.14:700,63,0	1/1:4,30:34:75.07:835,75,0	1/1:1,8:9:24.03:266,24,0	1/1:6,15:21:44.93:489,45,0	1/1:5,24:29:75.11:832,75,0	1/1:3,17:20:51.10:568,51,0	1/1:5,16:21:48.03:534,48,0	1/1:4,16:20:32.95:366,33,0	1/1:2,26:28:66.14:735,66,0	1/1:4,9:13:27:299,27,0	1/1:5,24:29:71.93:783,72,0	1/1:6,24:30:72.09:801,72,0	1/1:0,15:15:39.11:435,39,0
chr10	47133631	.	C	CAA	7154.25	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-13.723;DP=697;FS=1.177;HRun=0;HaplotypeScore=80.3444;InbreedingCoeff=0.9999;MQ=83.51;MQ0=0;MQRankSum=-2.877;QD=56.78;ReadPosRankSum=2.439;VQSLOD=5.1540;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,102,1655	0/0:23,0:23:69.24:0,69,1118	0/0:27,0:27:78.26:0,78,1214	0/0:22,0:22:59.52:0,60,973	0/0:17,0:17:51.15:0,51,805	0/0:20,0:20:54.18:0,54,879	0/0:22,0:22:63.20:0,63,1003	0/0:33,0:33:87.30:0,87,1411	0/0:28,0:28:84.27:0,84,1339	0/0:31,0:31:90.26:0,90,1429	0/0:17,0:17:48.12:0,48,753	0/0:24,0:24:69.24:0,69,1121	0/0:25,0:25:72.20:0,72,1143	0/0:19,0:19:57.18:0,57,900	0/0:17,0:17:51.17:0,51,831	0/0:34,0:34:99:0,99,1572	0/0:34,0:34:99:0,99,1576	0/0:12,0:12:36.12:0,36,586	1/1:2,20:23:66.21:1306,66,0	1/1:1,32:33:99:1886,99,0	1/1:0,41:41:99:2378,117,0	0/0:16,0:16:42.14:0,42,685	0/0:16,0:16:48.16:0,48,782	0/0:22,0:22:63.22:0,63,1027	0/0:29,0:29:81.21:0,81,1243	0/0:30,0:30:84.29:0,84,1370	1/1:1,28:29:78.27:1585,78,0	0/0:19,0:19:57.19:0,57,929
chr10	47134244	.	TA	T	75.10	PASS	AC=4;AF=0.118;AN=34;BaseQRankSum=4.410;DP=99;FS=12.481;HRun=1;HaplotypeScore=46.0820;InbreedingCoeff=0.5246;MQ=71.24;MQ0=2;MQRankSum=-1.867;QD=8.34;ReadPosRankSum=3.383;VQSLOD=-0.4484;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:10:27.53:0,28,316	1/1:0,5:5:14.69:102,15,0	0/0:3,0:2:0.89:0,1,2	0/0:12,0:4:6.85:0,7,56	0/0:2,0:2:6.02:0,6,76	./.	./.	0/0:13,0:11:33.11:0,33,421	./.	0/0:1,0:1:3.01:0,3,38	./.	0/0:1,0:1:3.01:0,3,38	0/0:1,0:1:3.01:0,3,38	./.	1/1:1,3:4:11.71:76,12,0	./.	0/0:17,0:17:28.94:0,29,321	0/0:12,0:12:30.08:0,30,376	0/0:2,0:2:6.01:0,6,66	0/0:1,0:1:3.01:0,3,38	./.	./.	./.	./.	0/0:4,0:4:9.03:0,9,115	0/0:2,0:2:6.02:0,6,76	./.	0/0:9,0:9:26.49:0,26,244
chr10	47134246	.	TATATATATATATATATATATATATATATATACATATATATA	T	2071.41	PASS	AC=4;AF=0.118;AN=34;BaseQRankSum=3.377;DP=95;FS=14.908;HRun=0;HaplotypeScore=140.1644;InbreedingCoeff=0.4944;MQ=66.90;MQ0=3;MQRankSum=-2.030;QD=230.16;ReadPosRankSum=2.623;VQSLOD=2.8876;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:17.72:0,18,1698	1/1:1,4:5:15.02:1204,15,0	0/0:3,0:2:2.50:0,2,9	0/0:12,0:3:6.48:0,6,89	0/0:2,0:2:6:0,6,73	./.	./.	0/0:14,0:12:36.11:0,36,2040	./.	0/0:1,0:1:3:0,3,28	./.	0/0:1,0:1:3:0,3,25	0/0:1,0:1:3:0,3,25	./.	1/1:1,3:4:12.04:971,12,0	./.	0/0:17,0:17:30.95:0,31,1677	0/0:12,0:12:30.10:0,30,2408	0/0:2,0:2:6.02:0,6,465	0/0:1,0:1:3:0,3,25	./.	./.	./.	./.	0/0:4,0:4:9.01:0,9,144	0/0:2,0:2:6:0,6,53	./.	0/0:4,0:4:12:0,12,388
chr10	47135133	.	T	TC	11919.06	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-15.368;DP=628;FS=4.478;HRun=2;HaplotypeScore=58.5813;InbreedingCoeff=0.9997;MQ=87.61;MQ0=0;MQRankSum=-4.339;QD=39.34;ReadPosRankSum=2.484;VQSLOD=5.4626;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,117,1450	0/0:9,0:9:27.06:0,27,319	0/0:18,0:18:42.09:0,42,500	0/0:27,0:27:72.12:0,72,866	1/1:1,16:17:48.16:690,48,0	0/0:16,0:16:48.15:0,48,595	0/0:30,0:30:84.24:0,84,1026	1/1:2,11:13:30.10:432,30,0	0/0:22,0:22:63.18:0,63,767	1/1:0,23:23:63.21:906,63,0	1/1:0,16:16:45.15:648,45,0	0/0:18,0:18:54.17:0,54,670	0/0:14,0:14:42.13:0,42,521	1/1:1,26:27:66.22:950,66,0	0/0:36,0:36:99:0,105,1302	0/0:27,0:27:75.22:0,75,917	1/1:2,33:35:96.32:1383,96,0	1/1:1,20:21:57.19:821,57,0	1/1:2,11:13:33.11:475,33,0	1/1:0,22:22:66.22:950,66,0	1/1:1,39:40:99:1555,108,0	0/0:17,0:17:48.14:0,48,583	0/0:20,0:20:57.18:0,57,706	0/0:30,0:30:84.25:0,84,1029	1/1:0,13:13:36.12:518,36,0	1/1:0,15:15:45.15:648,45,0	1/1:1,29:30:84.28:1209,84,0	1/1:1,17:18:51.17:734,51,0
chr10	47135500	.	AT	A	859.27	PASS	AB=1.000;AC=24;AF=0.429;AN=56;BaseQRankSum=-1.659;DP=523;FS=0.497;HRun=7;HaplotypeScore=110.1335;InbreedingCoeff=0.1048;MQ=62.83;MQ0=1;MQRankSum=1.464;QD=2.63;ReadPosRankSum=-0.946;VQSLOD=-0.6127;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:72.17:0,72,871	1/1:1,10:11:18.02:183,18,0	1/1:4,0:3:2.60:10,3,0	0/0:3,0:3:2.04:0,2,6	1/1:19,0:19:9.96:31,10,0	0/0:25,0:25:67.85:0,68,540	0/0:17,0:17:29.97:0,30,252	0/1:33,0:33:2.56:3,0,67	0/1:12,0:12:4.65:32,0,5	0/0:12,0:12:3.16:0,3,26	1/1:18,0:18:9.05:23,9,0	0/1:12,0:12:20.36:47,0,20	0/1:18,0:18:37.94:87,0,38	0/1:18,0:18:8.54:22,0,9	1/1:3,15:18:29.75:330,30,0	0/1:15,0:15:31.04:56,0,31	1/1:28,0:28:0.72:47,1,0	0/1:28,0:28:13.19:40,0,13	0/0:19,0:19:32.80:0,33,326	0/0:24,0:24:68.98:0,69,745	0/0:16,0:16:45.03:0,45,509	0/1:9,0:9:12.16:12,0,19	0/1:13,0:13:5.63:59,0,6	0/1:23,0:23:14.41:14,0,70	0/1:26,0:26:1.67:2,0,77	0/0:27,0:27:9.20:0,9,124	0/0:28,0:28:76.19:0,76,816	0/1:22,0:22:18.07:32,0,18
chr10	47135507	.	TA	T	5420.95	PASS	AB=1.000;AC=26;AF=0.464;AN=56;BaseQRankSum=-8.416;DP=512;FS=0.000;HRun=9;HaplotypeScore=98.7270;InbreedingCoeff=0.7117;MQ=62.58;MQ0=2;MQRankSum=1.935;QD=19.29;ReadPosRankSum=-1.727;VQSLOD=4.0690;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:72.14:0,72,794	0/1:12,0:12:4.14:4,0,45	1/1:3,0:2:2.04:6,2,0	0/1:3,0:3:6.42:6,0,19	1/1:0,19:19:56.94:502,57,0	0/0:4,0:23:63.37:0,63,339	0/0:2,0:15:31.71:0,32,165	1/1:3,29:32:86.96:774,87,0	0/0:12,0:12:8.96:0,9,87	1/1:1,14:15:41.99:372,42,0	1/1:0,16:16:48.03:439,48,0	0/0:12,0:12:15.04:0,15,171	0/0:16,0:16:24.07:0,24,274	1/1:1,17:18:48.02:439,48,0	0/1:19,0:19:17.83:18,0,75	0/0:14,0:14:27.08:0,27,308	1/1:1,25:26:68.95:620,69,0	1/1:2,25:27:69.04:631,69,0	0/1:17,0:17:12.22:12,0,54	0/0:25,0:25:39.60:0,40,160	0/0:15,0:15:36.03:0,36,143	0/0:7,0:7:15.04:0,15,163	0/0:17,0:17:16.35:0,16,156	0/0:21,0:21:36.06:0,36,395	1/1:3,22:25:51.02:466,51,0	1/1:4,24:28:68.98:619,69,0	0/0:26,0:26:31.66:0,32,176	1/1:1,20:21:28.36:514,28,0
chr10	47135553	.	ATG	A	964.24	PASS	AB=0.990;AC=25;AF=0.446;AN=56;BaseQRankSum=12.035;DP=538;FS=0.924;HRun=0;HaplotypeScore=171.1035;InbreedingCoeff=-0.1350;MQ=56.94;MQ0=9;MQRankSum=-10.601;QD=2.54;ReadPosRankSum=-6.373;VQSLOD=0.5611;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:16,1:17:16.46:16,0,239	0/1:6,0:6:12.82:13,0,24	0/0:26,0:12:7.07:0,7,199	0/0:21,0:9:13.29:0,13,179	0/1:25,0:26:46.33:46,0,92	1/1:10,8:17:26.24:212,26,0	1/1:10,9:16:17.87:177,18,0	0/0:41,0:36:54.61:0,55,237	0/1:17,0:17:1.96:50,0,2	0/1:17,0:17:38.28:59,0,38	0/1:23,0:23:0.02:0,0,124	0/1:19,0:19:8.06:74,0,8	0/1:15,0:15:1.90:60,0,2	0/1:12,0:12:15.76:16,0,57	0/1:15,0:15:23.24:23,0,72	0/1:17,0:17:33.88:45,0,34	0/0:22,0:22:5.71:0,6,81	0/0:23,0:23:26.28:0,26,184	0/1:16,0:15:9.77:10,0,83	0/1:20,0:20:48.57:49,0,71	0/0:10,0:10:14.32:0,14,79	1/1:17,0:17:21.71:101,22,0	0/1:23,0:24:0.02:62,0,0	1/1:17,0:17:2.80:13,3,0	0/1:26,1:27:79.16:79,0,91	0/1:20,0:20:17.03:17,0,91	0/1:17,0:17:4.49:4,0,93	0/0:16,0:16:2.16:0,2,120
chr10	47135563	.	GTGTGTGTGTATGTATGTA	G	2267.22	PASS	AB=0.993;AC=16;AF=0.286;AN=56;BaseQRankSum=8.941;DP=529;FS=0.000;HRun=0;HaplotypeScore=293.0605;InbreedingCoeff=0.2632;MQ=51.12;MQ0=14;MQRankSum=-8.113;QD=11.39;ReadPosRankSum=3.844;VQSLOD=1.5473;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:19:8.45:0,8,425	0/1:6,0:6:6.35:224,0,6	0/1:21,0:7:2.99:3,0,313	0/0:21,0:9:20.98:0,21,369	0/0:23,0:23:56.97:0,57,1310	1/1:11,5:15:30.09:1013,30,0	1/1:14,2:13:26.09:540,26,0	0/0:36,0:29:73.87:0,74,604	0/1:17,0:17:14.55:15,0,33	0/0:20,0:20:56.83:0,57,1263	0/0:27,0:27:61.89:0,62,1003	0/1:16,0:17:27.25:27,0,31	0/1:16,0:16:54.33:58,0,54	0/0:12,0:12:29.87:0,30,451	0/1:14,0:14:78.01:369,0,78	0/1:15,0:15:8.57:9,0,123	0/0:22,0:22:35.48:0,35,459	0/0:19,0:19:41.14:0,41,710	0/0:13,0:12:12.10:0,12,185	0/0:18,0:18:2.23:0,2,188	0/0:8,0:7:14.94:0,15,143	1/1:18,0:18:12.87:39,13,0	0/1:24,0:24:25.34:135,0,25	1/1:19,0:19:2.04:6,2,0	0/0:29,0:30:77.92:0,78,1616	0/0:25,0:24:71.63:0,72,1421	0/0:16,0:15:20.79:0,21,229	0/0:20,0:20:53.14:0,53,775
chr10	47135565	.	GTGTGTGTATGTA	G	11622.31	PASS	AB=0.881;AC=44;AF=0.786;AN=56;BaseQRankSum=0.293;DP=529;FS=13.648;HRun=0;HaplotypeScore=212.9275;InbreedingCoeff=-0.0424;MQ=49.70;MQ0=14;MQRankSum=-1.670;QD=22.83;ReadPosRankSum=5.422;VQSLOD=2.5825;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:21:82.85:83,0,125	1/1:4,0:6:15.02:272,15,0	0/1:21,0:7:6.56:7,0,104	0/0:20,0:8:18.03:0,18,185	0/1:14,0:23:45.92:163,0,46	1/1:15,0:14:16.39:473,16,0	0/1:15,0:12:5.61:174,0,6	1/1:33,0:26:30.91:510,31,0	1/1:0,17:17:18.06:618,18,0	0/1:13,0:20:67.66:208,0,68	0/1:20,0:26:13.47:316,0,13	1/1:2,16:18:27.09:926,27,0	1/1:3,12:15:21.07:675,21,0	1/1:10,0:13:15.15:174,15,0	1/1:10,0:14:35.89:563,36,0	1/1:0,15:15:24.08:736,24,0	0/1:21,0:22:21.48:144,0,21	0/1:15,1:16:27.13:303,0,27	1/1:4,12:15:41.87:617,42,0	1/1:14,8:22:48.08:1146,48,0	1/1:8,1:8:14.91:146,15,0	1/1:0,18:18:24.08:886,24,0	1/1:1,23:25:20.85:708,21,0	1/1:2,16:18:3.01:112,3,0	0/1:22,0:29:96.84:318,0,97	0/1:20,0:24:99:252,0,117	1/1:13,3:15:41.94:673,42,0	1/1:17,1:20:45.32:421,45,0
chr10	47135569	.	GTGTATGTATGTA	G	7073.14	PASS	AB=1.000;AC=35;AF=0.673;AN=52;BaseQRankSum=-0.948;DP=524;FS=5.265;HRun=0;HaplotypeScore=229.8236;InbreedingCoeff=0.6201;MQ=48.37;MQ0=13;MQRankSum=-4.003;QD=22.17;ReadPosRankSum=3.712;VQSLOD=3.3765;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:12,9:20:6.02:144,6,0	1/1:6,0:6:12.03:233,12,0	./.	./.	0/0:25,0:26:42.37:0,42,334	1/1:15,0:14:15.05:444,15,0	1/1:13,0:10:6.02:127,6,0	0/0:31,0:24:8.97:0,9,82	1/1:17,0:17:18.06:515,18,0	0/0:20,0:20:33.63:0,34,323	0/0:26,0:26:16.63:0,17,168	1/1:18,0:18:27.09:815,27,0	1/1:13,1:14:21.07:613,21,0	0/0:16,0:16:20.99:0,21,149	1/1:14,0:14:17.79:397,18,0	1/1:15,0:15:24.08:592,24,0	0/0:21,0:21:11.68:0,12,122	0/1:16,0:16:77.17:77,0,143	1/1:16,0:15:14.42:316,14,0	1/1:23,0:23:33.11:875,33,0	1/1:9,0:8:3.01:40,3,0	1/1:18,0:18:24.08:745,24,0	1/1:25,0:25:20.85:596,21,0	1/1:16,0:16:3.01:95,3,0	0/1:28,0:28:15.48:15,0,341	0/0:27,0:26:43.84:0,44,467	1/1:16,0:15:12.03:358,12,0	0/1:19,0:19:75.83:76,0,87
chr10	47135571	.	GTA	G	1787.93	PASS	AB=0.975;AC=28;AF=0.500;AN=56;BaseQRankSum=7.870;DP=521;FS=0.401;HRun=0;HaplotypeScore=170.7327;InbreedingCoeff=-0.4292;MQ=48.16;MQ0=14;MQRankSum=-7.965;QD=4.06;ReadPosRankSum=2.656;VQSLOD=2.8872;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:20:5.06:0,5,185	0/1:6,0:6:13.11:13,0,70	0/0:20,0:6:17.89:0,18,176	0/1:18,0:7:5.22:5,0,129	0/1:25,1:26:99:160,0,231	1/1:14,0:13:25.52:130,26,0	1/1:13,0:10:19.14:109,19,0	0/0:31,0:24:30.11:0,30,688	0/1:17,0:17:16.67:50,0,17	0/1:19,0:19:99:221,0,158	0/1:25,0:25:42.75:43,0,406	0/1:17,0:17:10.52:79,0,11	0/1:14,0:14:15.57:54,0,16	0/1:14,2:16:99:106,0,182	0/1:13,0:13:21.90:22,0,205	0/1:15,0:15:44.27:44,0,79	0/1:21,0:21:53.23:53,0,184	0/1:15,1:16:12.25:12,0,321	0/1:16,0:15:44.44:44,0,236	0/1:24,0:24:67.53:68,0,248	0/0:9,0:8:14.98:0,15,169	1/1:18,0:18:22.72:113,23,0	0/1:25,0:25:14.74:62,0,15	1/1:16,0:16:2.80:13,3,0	0/1:28,0:28:99:186,0,228	0/1:24,4:27:99:256,0,251	0/1:14,0:13:8.12:8,0,240	0/1:16,4:20:99:102,0,338
chr10	47135631	.	C	CT	6726.95	PASS	AB=1.000;AC=36;AF=0.643;AN=56;BaseQRankSum=2.939;DP=572;FS=17.374;HRun=10;HaplotypeScore=143.4439;InbreedingCoeff=0.8834;MQ=58.25;MQ0=10;MQRankSum=-2.922;QD=17.25;ReadPosRankSum=0.239;VQSLOD=3.7014;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:27:50.74:0,51,418	1/1:2,0:8:19.89:100,20,0	0/1:20,0:9:12.24:12,0,80	0/0:19,0:11:7.41:0,7,26	1/1:11,20:32:51.07:694,51,0	1/1:8,3:19:43.13:254,43,0	1/1:11,1:18:37.26:209,37,0	1/1:11,27:36:52.31:747,52,0	0/0:17,0:17:29.96:0,30,246	1/1:11,21:33:47.40:686,47,0	1/1:2,12:14:39.10:414,39,0	0/0:18,0:19:40.58:0,41,311	0/0:15,0:15:26.95:0,27,221	1/1:6,9:15:32.87:330,33,0	1/1:6,0:11:23.23:115,23,0	0/0:19,0:19:29.94:0,30,246	1/1:5,23:28:81.04:829,81,0	1/1:5,12:16:14.45:355,14,0	1/1:17,0:18:29.97:142,30,0	1/1:17,1:27:52.72:284,53,0	0/1:2,0:2:0:0,0,0	0/0:21,0:21:44.91:0,45,368	0/0:25,0:25:44.59:0,45,359	0/0:18,0:18:32.96:0,33,271	1/1:6,17:21:49.37:513,49,0	1/1:7,19:28:48.82:594,49,0	1/1:11,0:19:38.94:215,39,0	1/1:6,8:14:23.55:233,24,0
chr10	47135645	.	C	CT	1707.76	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=4.023;DP=585;FS=6.288;HRun=9;HaplotypeScore=132.5234;InbreedingCoeff=0.9288;MQ=59.44;MQ0=9;MQRankSum=-9.927;QD=16.42;ReadPosRankSum=-0.562;VQSLOD=2.4515;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:27:62.58:0,63,530	0/0:10,0:10:20.59:0,21,174	0/0:25,0:6:8.98:0,9,74	0/0:23,0:11:8.09:0,8,53	0/0:29,0:29:65.63:0,66,610	1/1:6,10:16:33.07:350,33,0	1/1:8,12:18:35.44:360,35,0	0/0:38,0:36:78.60:0,79,746	0/0:16,0:16:35.98:0,36,309	0/0:27,0:27:53.71:0,54,467	0/0:17,0:17:35.97:0,36,312	0/0:16,0:16:38.73:0,39,324	0/0:15,0:15:32.98:0,33,286	0/0:14,0:14:38.98:0,39,335	0/0:12,0:12:21.87:0,22,184	0/0:24,0:24:50.98:0,51,441	0/0:32,1:32:52.82:0,53,672	0/0:24,0:23:44.83:0,45,460	1/1:10,6:15:26.14:244,26,0	1/1:10,17:25:57.92:591,58,0	1/1:1,2:3:3.01:33,3,0	0/0:20,0:20:47.97:0,48,412	0/0:24,0:24:56.78:0,57,494	0/0:19,0:19:44.97:0,45,385	0/0:23,0:21:50.97:0,51,441	0/0:25,0:25:71.06:0,71,564	1/1:9,12:21:11.56:307,12,0	0/0:19,0:19:35.80:0,36,350
chr10	47135893	.	TA	T	3816.21	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=8.990;DP=600;FS=0.845;HRun=2;HaplotypeScore=60.1394;InbreedingCoeff=0.9978;MQ=70.45;MQ0=0;MQRankSum=-2.112;QD=35.34;ReadPosRankSum=2.495;VQSLOD=4.1728;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,132,1825	0/0:7,0:7:21.07:0,21,315	0/0:22,0:22:66.16:0,66,944	0/0:9,0:8:22.41:0,22,274	0/0:23,0:23:69.20:0,69,998	0/0:15,0:15:45.15:0,45,673	0/0:14,0:14:42.11:0,42,589	0/0:24,0:24:72.24:0,72,1061	0/0:13,0:13:39.13:0,39,584	0/0:28,0:28:84.28:0,84,1241	0/0:17,0:17:45.15:0,45,674	0/0:12,0:12:33.10:0,33,474	0/0:23,0:23:69.23:0,69,1034	0/0:17,0:17:51.17:0,51,764	0/0:28,0:28:84.28:0,84,1258	0/0:18,0:18:51.13:0,51,737	0/0:27,0:27:81.23:0,81,1151	0/0:31,0:31:90.30:0,90,1342	1/1:0,24:24:72.23:935,72,0	1/1:0,17:17:48.16:623,48,0	1/1:0,31:31:87.28:1129,87,0	0/0:19,0:19:51.17:0,51,764	0/0:23,0:23:63.20:0,63,917	0/0:24,0:24:72.23:0,72,1055	0/0:18,0:18:51.17:0,51,764	0/0:23,0:23:69.23:0,69,1033	1/1:2,34:36:87.28:1129,87,0	0/0:10,0:10:30.10:0,30,450
chr10	47136557	.	G	GTA	9369.31	PASS	AC=32;AF=0.615;AN=52;BaseQRankSum=-3.989;DP=420;FS=22.017;HRun=0;HaplotypeScore=58.8563;InbreedingCoeff=0.8715;MQ=72.29;MQ0=3;MQRankSum=-0.413;QD=32.42;ReadPosRankSum=0.993;VQSLOD=4.4466;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:57.12:0,57,667	./.	0/0:4,0:4:0.47:0,0,1	0/0:17,0:11:1.55:0,2,5	1/1:6,16:22:21.32:669,21,0	1/1:22,0:22:45.13:512,45,0	1/1:7,0:7:9.02:95,9,0	1/1:7,27:34:81.24:1288,81,0	0/0:13,0:13:36.05:0,36,397	1/1:1,20:21:60.17:943,60,0	1/1:3,19:22:51.17:841,51,0	0/0:12,0:12:26.45:0,26,308	0/0:12,0:12:24.08:0,24,300	1/1:1,7:8:12.04:198,12,0	./.	0/0:16,0:16:39.10:0,39,472	1/1:2,15:17:33.11:545,33,0	1/1:2,17:19:45.15:737,45,0	1/1:10,0:10:6.71:114,7,0	1/1:13,0:13:27.08:306,27,0	1/1:3,0:3:6.02:71,6,0	0/0:6,0:6:6.01:0,6,66	0/0:16,0:16:30.08:0,30,362	0/0:8,0:8:18.02:0,18,207	1/1:5,18:23:51.17:842,51,0	1/1:2,20:22:60.21:991,60,0	1/1:22,0:22:45.13:510,45,0	1/1:5,19:24:10.65:705,11,0
chr10	47136559	.	A	ATG	6341.11	PASS	AB=1.000;AC=26;AF=0.500;AN=52;BaseQRankSum=12.430;DP=417;FS=35.864;HRun=0;HaplotypeScore=68.5273;InbreedingCoeff=0.4682;MQ=71.38;MQ0=3;MQRankSum=0.282;QD=21.79;ReadPosRankSum=5.203;VQSLOD=3.1752;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:75.14:0,75,1000	./.	0/0:5,0:5:2.69:0,3,14	0/0:14,0:9:2.07:0,2,5	0/1:20,0:20:63.57:307,0,64	1/1:2,23:25:45.09:864,45,0	1/1:2,5:7:9.92:175,10,0	0/1:35,0:35:20.18:491,0,20	0/0:13,0:13:39.12:0,39,567	1/1:21,0:21:32.66:395,33,0	1/1:21,0:21:50.99:448,51,0	0/0:13,0:13:36.08:0,36,472	0/0:12,0:12:30.07:0,30,417	0/1:8,0:8:8.98:83,0,9	./.	0/0:15,0:15:39.13:0,39,593	0/1:19,0:19:26.93:230,0,27	1/1:18,0:18:44.95:379,45,0	1/1:0,10:10:26.70:342,27,0	1/1:1,12:13:27.06:519,27,0	1/1:0,3:3:6.02:115,6,0	0/0:5,0:5:12.02:0,12,140	0/0:15,0:15:39.09:0,39,531	0/0:8,0:8:24.02:0,24,315	0/1:22,0:22:36.86:365,0,37	1/1:23,0:23:36.83:425,37,0	1/1:0,22:22:45.15:865,45,0	0/1:24,0:24:80.66:338,0,81
chr10	47136848	.	G	GTCTCTC	4180.45	PASS	AB=0.950;AC=42;AF=0.808;AN=52;BaseQRankSum=-2.542;DP=679;FS=19.838;HRun=0;HaplotypeScore=154.8192;InbreedingCoeff=0.2608;MQ=66.90;MQ0=26;MQRankSum=2.419;QD=8.39;ReadPosRankSum=-2.800;VQSLOD=1.1169;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:15:3.01:92,3,0	0/0:2,0:3:3.01:0,3,42	./.	./.	1/1:16,0:16:6.02:132,6,0	1/1:32,0:32:2.04:6,2,0	1/1:16,0:16:6.80:128,7,0	1/1:39,0:38:10.09:153,10,0	1/1:15,0:22:6.02:72,6,0	1/1:31,0:31:29.33:502,29,0	0/1:20,0:20:51.72:96,0,52	1/1:15,0:15:5.62:185,6,0	1/1:19,0:19:9.03:240,9,0	0/1:18,4:24:56.34:89,0,56	0/0:13,0:22:15.05:0,15,209	1/1:20,0:27:5.65:172,6,0	0/1:25,0:25:45.25:265,0,45	1/1:16,1:23:12.04:264,12,0	1/1:20,0:19:9.03:266,9,0	1/1:23,0:22:6.01:119,6,0	1/1:24,0:23:8.85:244,9,0	0/1:14,0:13:0:0,0,0	1/1:14,0:14:5.99:49,6,0	0/0:12,1:19:1.77:0,2,4	1/1:19,0:18:17.62:259,18,0	1/1:27,0:27:23.20:484,23,0	1/1:21,0:19:5.93:106,6,0	1/1:12,0:12:16.60:257,17,0
chr10	47139000	.	GCACACA	G	1702.40	PASS	AB=0.731;AC=30;AF=0.577;AN=52;BaseQRankSum=2.613;DP=659;FS=5.968;HRun=0;HaplotypeScore=151.0496;InbreedingCoeff=0.6031;MQ=57.87;MQ0=16;MQRankSum=-3.594;QD=4.25;ReadPosRankSum=2.055;VQSLOD=2.3409;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:31:0:0,0,0	1/1:3,0:5:3.01:42,3,0	./.	./.	0/0:11,0:16:11.49:0,11,211	1/1:9,0:20:6.49:84,6,0	0/1:20,0:34:36.41:41,0,36	0/0:19,0:18:8.80:0,9,54	1/1:13,0:27:6.67:13,7,0	0/0:22,0:36:65.69:0,66,1093	0/0:11,0:11:3:0,3,26	1/1:10,15:27:12.06:219,12,0	1/1:14,4:23:33.61:543,34,0	0/0:16,0:31:11:0,11,176	1/1:13,0:26:17.81:157,18,0	1/1:11,11:22:6.01:94,6,0	0/0:14,0:26:24.08:0,24,523	0/0:14,0:25:17.19:0,17,284	1/1:12,3:15:9.03:163,9,0	1/1:5,3:8:3.01:61,3,0	1/1:39,18:55:0.73:3,1,0	1/1:11,10:20:6.90:76,7,0	1/1:17,10:26:5.72:98,6,0	1/1:23,12:34:1.93:31,2,0	0/0:9,0:21:4.16:0,4,40	0/0:14,0:29:56.14:0,56,985	1/1:7,8:15:18.48:252,18,0	0/0:10,0:12:3.01:0,3,79
chr10	47142000	.	A	ATTCTTT	4785.19	PASS	AB=0.710;AC=25;AF=0.446;AN=56;BaseQRankSum=1.028;DP=459;FS=67.856;HRun=0;HaplotypeScore=111.2580;InbreedingCoeff=0.6614;MQ=72.02;MQ0=16;MQRankSum=-7.702;QD=21.08;ReadPosRankSum=-7.440;VQSLOD=-0.5444;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:29:47.22:0,47,830	0/1:3,0:7:4.10:4,0,147	0/0:19,0:11:10.14:0,10,162	0/1:19,0:16:1.66:2,0,132	1/1:14,0:16:29.25:418,29,0	0/0:15,0:17:22.94:0,23,670	0/0:20,0:23:61.11:0,61,1003	1/1:24,1:25:51.58:787,52,0	0/0:12,0:14:29.75:0,30,503	1/1:6,1:13:33.01:454,33,0	1/1:16,1:20:44.50:702,44,0	0/0:15,0:14:28.05:0,28,600	0/0:8,0:7:11.68:0,12,183	1/1:6,6:15:2.86:153,3,0	0/0:7,0:13:29.79:0,30,336	0/0:9,0:10:23.81:0,24,344	1/1:5,0:19:24.09:506,24,0	1/1:9,1:10:26.93:411,27,0	0/0:12,0:21:15.96:0,16,410	0/1:4,0:7:4.32:4,0,114	0/1:6,0:15:25.47:25,0,261	0/0:13,0:13:14.56:0,15,245	0/0:13,0:12:26.90:0,27,479	0/0:27,0:30:51.24:0,51,900	1/1:14,7:25:39.94:654,40,0	1/1:6,5:16:29.63:517,30,0	0/1:3,0:9:13.69:14,0,94	1/1:5,0:5:12.01:134,12,0
chr10	47142631	.	A	AT	2264.17	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-8.247;DP=472;FS=13.013;HRun=5;HaplotypeScore=48.5265;InbreedingCoeff=0.9960;MQ=68.14;MQ0=5;MQRankSum=0.288;QD=32.81;ReadPosRankSum=1.166;VQSLOD=3.0946;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,39:40:99:1421,108,0	1/1:1,9:10:27.09:355,27,0	0/0:16,0:13:36.08:0,36,377	0/0:19,0:14:31.01:0,31,337	0/0:18,0:18:45.11:0,45,479	0/0:20,0:20:60.15:0,60,645	0/0:21,0:21:54.13:0,54,580	0/0:27,0:27:78.18:0,78,830	0/0:10,0:10:30.07:0,30,320	0/0:17,0:17:48.12:0,48,516	0/0:18,0:18:51.11:0,51,538	0/0:7,0:7:21.05:0,21,226	0/0:10,0:10:27.07:0,27,290	0/0:22,0:22:60.15:0,60,645	1/1:1,18:19:48.16:631,48,0	0/0:11,0:11:33.08:0,33,354	0/0:30,0:30:87.22:0,87,934	0/0:12,0:12:36.09:0,36,387	0/0:24,0:22:51.12:0,51,548	0/0:21,0:20:54.12:0,54,568	0/0:13,0:13:39.10:0,39,419	0/0:10,0:10:30.08:0,30,322	0/0:15,0:15:36.09:0,36,387	0/0:11,0:11:33.08:0,33,355	0/0:18,0:18:48.12:0,48,516	0/0:15,0:15:36.09:0,36,387	0/0:10,0:10:30.08:0,30,322	0/0:8,0:8:24.06:0,24,258
chr10	47145569	.	GA	G	804.95	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.639;DP=511;FS=8.721;HRun=4;HaplotypeScore=55.5021;InbreedingCoeff=0.9278;MQ=95.16;MQ0=0;MQRankSum=-3.139;QD=30.96;ReadPosRankSum=-0.085;VQSLOD=3.5477;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,26:26:75.23:900,75,0	0/0:6,0:6:18.06:0,18,251	0/0:21,0:22:50.50:0,51,733	0/0:25,0:25:63.18:0,63,842	0/0:10,0:10:30.10:0,30,420	0/0:14,0:14:42.13:0,42,571	0/0:27,0:27:78.25:0,78,1068	0/0:33,0:33:96.32:0,96,1337	0/0:12,0:12:36.12:0,36,504	0/0:23,0:23:66.22:0,66,925	0/0:16,0:16:45.15:0,45,630	0/0:14,0:14:39.13:0,39,546	0/0:16,0:16:48.16:0,48,672	0/0:27,0:27:69.23:0,69,965	0/0:10,0:10:30.09:0,30,403	0/0:18,0:18:54.18:0,54,756	0/0:26,0:26:69.22:0,69,948	0/0:33,0:33:93.19:0,93,1205	0/0:15,0:15:32.53:0,33,425	0/0:6,0:6:18.01:0,18,215	0/0:23,0:23:69.21:0,69,948	0/0:14,0:14:42.14:0,42,585	0/0:9,0:9:24.07:0,24,318	0/0:26,0:26:75.25:0,75,1050	0/0:13,0:13:39.12:0,39,531	0/0:26,0:26:78.25:0,78,1078	0/0:18,0:18:51.17:0,51,712	0/0:3,0:3:9.03:0,9,126
chr10	47146350	.	GAGTACCAA	G	27705.01	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=18.511;DP=648;FS=11.972;HRun=0;HaplotypeScore=199.5493;InbreedingCoeff=0.9705;MQ=76.78;MQ0=0;MQRankSum=-19.437;QD=70.32;ReadPosRankSum=2.667;VQSLOD=3.7702;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,24:26:60.21:1664,60,0	0/0:9,0:9:27.09:0,27,1175	0/0:22,0:22:63.22:0,63,2528	0/0:23,0:23:66.23:0,66,2496	1/1:0,21:21:54.19:1527,54,0	0/0:26,0:26:78.27:0,78,3474	0/0:19,0:19:57.20:0,57,2443	1/1:0,19:19:57.18:1428,57,0	1/1:1,23:24:60.21:1714,60,0	1/1:0,22:22:63.22:1807,63,0	1/1:2,17:19:45.11:1220,45,0	1/1:1,24:25:63.22:1807,63,0	1/1:2,20:22:51.18:1455,51,0	1/1:2,27:29:63.22:1806,63,0	0/0:35,0:35:99:0,105,4645	1/1:0,15:15:42.14:1205,42,0	1/1:1,17:18:42.14:1205,42,0	1/1:0,15:15:42.14:1202,42,0	0/0:19,0:19:54.18:0,54,2242	0/0:29,1:30:2.80:0,3,3653	0/0:41,0:41:99:0,123,5375	1/1:2,25:27:72.25:2041,72,0	1/1:3,25:28:72.25:2056,72,0	1/1:2,12:14:15.05:429,15,0	1/1:2,23:25:60.21:1719,60,0	1/1:3,29:32:87.30:2388,87,0	0/0:30,0:30:84.29:0,84,3571	1/1:0,12:12:36.12:1033,36,0
chr10	47146493	.	AGT	A	20762	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-1.794;DP=787;FS=14.228;HRun=0;HaplotypeScore=104.1218;InbreedingCoeff=0.9540;MQ=70.42;MQ0=13;MQRankSum=-6.748;QD=28.68;ReadPosRankSum=5.625;VQSLOD=5.8624;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,25:28:63.16:777,63,0	1/1:0,19:19:42.13:530,42,0	0/0:30,0:27:41.88:0,42,876	0/0:33,0:29:53.35:0,53,801	1/1:0,20:20:51.16:644,51,0	1/1:0,34:34:87.28:1098,87,0	1/1:4,19:23:51.16:644,51,0	1/1:6,37:43:99:1375,111,0	1/1:5,32:37:81.26:1022,81,0	1/1:6,45:49:99:1532,123,0	1/1:4,9:13:24.03:285,24,0	1/1:1,33:34:78.25:984,78,0	1/1:5,25:30:54.17:681,54,0	1/1:1,22:23:42.13:530,42,0	1/1:2,31:33:81.26:1022,81,0	1/1:1,23:24:63.20:795,63,0	1/1:4,23:27:51.06:644,51,0	1/1:5,23:28:56.85:692,57,0	1/1:5,18:23:7.27:620,7,0	1/1:1,26:25:66.21:831,66,0	1/1:2,29:30:75.24:947,75,0	1/1:4,30:31:72.23:909,72,0	1/1:3,18:18:39.12:492,39,0	1/1:1,13:13:36.12:454,36,0	1/1:4,22:26:54.17:682,54,0	1/1:2,35:36:99:1324,105,0	1/1:5,33:38:81.26:1022,81,0	1/1:0,6:6:18.06:227,18,0
chr10	47147527	.	T	TTC	374.27	PASS	AB=0.955;AC=11;AF=0.220;AN=50;BaseQRankSum=-0.517;DP=752;FS=15.187;HRun=0;HaplotypeScore=164.8915;InbreedingCoeff=0.4224;MQ=60.17;MQ0=12;MQRankSum=2.328;QD=1.75;ReadPosRankSum=-2.836;VQSLOD=0.5419;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:17.66:0,18,141	0/0:11,0:11:8.93:0,9,66	./.	./.	0/0:22,0:26:23.77:0,24,196	0/0:29,0:29:2.80:0,3,13	./.	0/0:42,0:42:8.76:0,9,53	0/0:27,0:27:15.67:0,16,72	0/1:26,0:27:0.18:0,0,155	0/1:17,0:17:7.08:7,0,110	0/0:34,0:34:22.68:0,23,110	0/0:26,0:26:17.14:0,17,77	0/1:24,9:34:33.17:33,0,56	0/0:24,0:23:13.98:0,14,134	0/0:32,0:33:34.09:0,34,168	0/0:33,0:34:37.95:0,38,296	0/0:20,0:21:11.85:0,12,203	1/1:18,0:18:14.92:152,15,0	1/1:23,0:22:13.54:102,14,0	0/1:42,0:41:16.71:160,0,17	0/0:22,0:22:4.97:0,5,18	0/0:15,0:15:0:0,0,0	0/1:30,0:30:0.11:0,0,0	0/0:20,0:20:14.94:0,15,124	0/0:30,0:29:23.89:0,24,193	1/1:23,0:23:6.69:58,7,0	0/0:9,0:8:10.92:0,11,78
chr10	47147541	.	CTCTCTCTCTCTCTCTCTCTCTCTCTCTG	C	8222.32	PASS	AB=0.545;AC=13;AF=0.232;AN=56;BaseQRankSum=10.934;DP=750;FS=6.474;HRun=0;HaplotypeScore=385.9973;InbreedingCoeff=0.9155;MQ=55.16;MQ0=16;MQRankSum=-9.594;QD=38.24;ReadPosRankSum=4.812;VQSLOD=1.8062;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:45.51:0,46,3396	0/0:10,0:10:18.06:0,18,1464	0/0:16,0:4:6.02:0,6,301	0/0:33,0:14:18.25:0,18,544	0/0:23,0:23:54.19:0,54,5040	0/0:27,0:27:23.20:0,23,1218	0/0:39,0:36:31.34:0,31,1365	0/0:36,0:34:89.27:0,89,4880	1/1:4,23:28:32.98:1731,33,0	0/0:29,0:28:84.27:0,84,6867	0/0:19,0:18:45.15:0,45,3829	1/1:9,29:40:27.52:1767,28,0	1/1:5,22:29:24.08:1313,24,0	0/0:28,0:28:51.65:0,52,4045	0/0:18,0:15:30.03:0,30,2610	1/1:6,28:35:45.13:2898,45,0	0/0:41,0:41:99:0,110,8927	0/0:23,0:23:69.13:0,69,6786	0/0:15,0:15:45.15:0,45,3359	0/0:20,0:19:41.24:0,41,3411	0/0:35,0:34:69.24:0,69,6168	1/1:9,20:29:13.33:437,13,0	0/1:3,14:18:0.22:1,0,0	1/1:11,23:35:6.20:75,6,0	0/0:20,0:20:54.17:0,54,4306	0/0:33,0:32:93.31:0,93,7941	0/0:21,0:21:33.58:0,34,3321	0/0:13,0:11:30.10:0,30,2722
chr10	47147559	.	CTCTCTCTCTGTGTG	C	2310.41	PASS	AB=0.932;AC=10;AF=0.179;AN=56;BaseQRankSum=10.532;DP=681;FS=8.096;HRun=0;HaplotypeScore=239.0585;InbreedingCoeff=0.2341;MQ=51.23;MQ0=14;MQRankSum=-8.168;QD=10.50;ReadPosRankSum=5.992;VQSLOD=0.7745;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:28.04:0,28,1050	0/0:6,0:6:12.04:0,12,407	0/0:6,0:2:6.02:0,6,106	0/0:15,0:3:3.48:0,3,73	0/0:26,0:26:55.43:0,55,2022	1/1:6,0:21:4.83:82,5,0	0/1:12,26:35:54.07:86,0,54	0/0:27,0:25:42.53:0,43,823	0/1:32,0:31:0.89:434,0,1	0/0:26,0:25:35.09:0,35,2416	0/0:19,0:18:39.12:0,39,1231	0/1:33,0:33:4.71:579,0,5	0/1:26,0:26:8.10:364,0,8	0/0:27,0:27:46.10:0,46,1696	0/0:18,0:15:24:0,24,797	0/1:33,0:33:44.71:796,0,45	0/0:39,0:39:47.64:0,48,3319	0/0:22,0:22:64.46:0,64,2916	0/0:12,0:12:27.09:0,27,1250	0/0:21,0:21:38.91:0,39,1153	0/0:39,0:38:82.72:0,83,2606	0/1:21,0:21:23.25:100,0,23	1/1:16,0:16:0.10:1,0,0	0/0:34,0:33:7.55:0,8,35	0/0:21,0:21:45.12:0,45,1241	0/0:33,0:33:97.98:0,98,3021	0/0:25,0:25:40.06:0,40,1150	0/0:13,0:11:33.07:0,33,779
chr10	47147565	.	C	CTGTG	540.20	PASS	AB=0.968;AC=8;AF=0.143;AN=56;BaseQRankSum=4.247;DP=687;FS=15.499;HRun=0;HaplotypeScore=183.5959;InbreedingCoeff=-0.0658;MQ=51.31;MQ0=13;MQRankSum=0.110;QD=2.80;ReadPosRankSum=-0.544;VQSLOD=1.4048;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:19.94:0,20,273	0/0:5,0:5:9.02:0,9,115	0/0:8,0:3:9:0,9,105	0/0:13,0:4:2.75:0,3,39	0/0:25,0:25:54.31:0,54,803	0/0:20,0:20:2.79:0,3,11	0/1:37,0:34:2.26:2,0,162	0/0:32,0:30:47.25:0,47,604	0/0:32,0:31:26.64:0,27,266	0/0:30,0:29:74.20:0,74,1119	0/0:18,0:17:32.96:0,33,514	0/0:33,0:33:25.57:0,26,248	0/0:26,0:26:16.04:0,16,146	0/0:29,0:29:50.69:0,51,756	0/1:19,0:16:68.73:69,0,208	0/0:33,0:33:41.86:0,42,463	0/0:36,0:36:66.51:0,67,1102	0/0:24,0:24:56.90:0,57,825	0/1:14,0:14:26.17:26,0,224	0/1:13,7:20:99:110,0,194	0/1:41,0:40:99:437,0,387	0/1:21,0:21:2.33:2,0,59	0/1:16,0:16:0.26:1,0,0	0/0:34,0:33:8.53:0,9,87	0/0:19,0:19:34.04:0,34,527	0/0:35,0:35:95.82:0,96,1268	0/1:25,0:25:7.86:8,0,154	0/0:10,0:8:16.35:0,16,208
chr10	47147567	.	C	CTGTGTGTGTGTG	629.13	PASS	AB=0.856;AC=13;AF=0.241;AN=54;BaseQRankSum=1.153;DP=709;FS=1.837;HRun=0;HaplotypeScore=259.1228;InbreedingCoeff=0.2524;MQ=50.83;MQ0=15;MQRankSum=-0.630;QD=2.51;ReadPosRankSum=-3.589;VQSLOD=1.9951;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:22,9:37:16.87:17,0,21	./.	0/0:11,0:4:9.03:0,9,196	0/0:16,0:6:2.68:0,3,82	0/0:25,0:25:33.10:0,33,965	1/1:20,0:20:0.89:2,1,0	0/0:37,0:34:10.88:0,11,352	0/1:34,0:32:26.30:26,0,591	0/0:32,0:31:26.66:0,27,699	0/0:31,0:30:51.16:0,51,1594	0/0:17,0:16:18.06:0,18,574	0/0:33,0:33:23.18:0,23,659	0/0:26,0:26:12.04:0,12,330	0/0:28,0:28:41.60:0,42,1351	1/1:23,0:20:9.01:150,9,0	0/1:32,0:33:12.79:13,0,1269	0/0:38,0:38:45.59:0,46,1426	0/0:23,0:23:36.26:0,36,1093	1/1:17,0:16:3.12:128,3,0	1/1:20,0:20:5.08:48,5,0	0/1:43,0:43:99:284,0,115	0/0:21,0:21:7.04:0,7,196	0/0:16,0:16:0.96:0,1,1	0/0:33,0:33:4.68:0,5,194	0/0:19,0:19:27.08:0,27,746	0/0:34,0:34:45.10:0,45,1385	0/1:7,0:23:99:104,0,114	0/0:11,0:9:2.72:0,3,103
chr10	47148958	.	T	TG	871.87	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-5.539;DP=653;FS=0.813;HRun=1;HaplotypeScore=65.0696;InbreedingCoeff=0.9828;MQ=88.06;MQ0=0;MQRankSum=-1.292;QD=34.87;ReadPosRankSum=0.595;VQSLOD=3.6004;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,144,1869	1/1:0,4:4:12.04:180,12,0	0/0:24,0:24:72.18:0,72,882	0/0:23,0:23:63.20:0,63,800	0/0:29,0:29:78.25:0,78,1009	0/0:21,0:21:63.17:0,63,798	0/0:17,0:17:48.14:0,48,608	0/0:24,0:24:63.20:0,63,818	0/0:18,0:18:51.17:0,51,662	0/0:20,0:20:60.19:0,60,765	0/0:17,0:17:39.04:0,39,479	0/0:26,0:26:78.25:0,78,1011	0/0:24,0:24:69.22:0,69,895	0/0:25,0:25:72.20:0,72,893	1/1:1,20:21:54.18:809,54,0	0/0:20,0:20:57.19:0,57,740	0/0:32,0:32:93.28:0,93,1189	0/0:19,0:19:51.14:0,51,644	0/0:19,0:19:51.13:0,51,644	0/0:13,0:13:36.12:0,36,466	0/0:60,0:60:99:0,181,2330	0/0:18,0:18:48.16:0,48,623	0/0:17,0:17:51.14:0,51,623	0/0:32,0:32:90.28:0,90,1153	0/0:21,0:21:63.13:0,63,785	0/0:22,0:22:66.21:0,66,856	0/0:31,0:31:93.29:0,93,1192	0/0:8,0:8:24.06:0,24,283
chr10	47157299	.	C	CG	734.73	PASS	AB=0.930;AC=24;AF=0.462;AN=52;BaseQRankSum=-0.397;DP=303;FS=3.568;HRun=11;HaplotypeScore=73.9135;InbreedingCoeff=0.2979;MQ=75.11;MQ0=2;MQRankSum=-1.445;QD=4.06;ReadPosRankSum=-1.524;VQSLOD=0.6458;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:14.88:0,15,113	0/0:1,0:2:2.04:0,2,6	0/1:34,0:16:6.61:7,0,52	0/1:21,0:11:17.58:42,0,18	./.	0/1:11,1:12:2.29:114,0,2	1/1:18,0:18:35.83:273,36,0	./.	0/0:6,0:6:5.01:0,5,29	1/1:12,2:14:3.01:30,3,0	1/1:3,3:6:3.01:30,3,0	0/1:5,1:6:12.71:13,0,15	0/0:10,0:10:21.38:0,21,137	0/1:14,2:16:10.17:78,0,10	0/0:10,0:15:8.12:0,8,23	1/1:5,0:5:5.93:39,6,0	1/1:12,2:13:3.96:125,4,0	1/1:7,6:13:5.97:45,6,0	0/0:4,0:8:8.14:0,8,24	0/0:3,0:5:4.07:0,4,12	0/0:2,0:8:14.26:0,14,41	0/0:8,0:8:11.93:0,12,88	0/0:6,0:6:5.94:0,6,44	0/1:9,1:10:18.53:19,0,55	1/1:2,5:7:3.01:30,3,0	1/1:2,1:3:3.01:30,3,0	0/0:8,0:13:22.66:0,23,87	1/1:2,0:2:2.97:20,3,0
chr10	47157308	.	G	GT	603.05	PASS	AB=0.957;AC=8;AF=0.143;AN=56;BaseQRankSum=-1.200;DP=290;FS=7.633;HRun=0;HaplotypeScore=46.9100;InbreedingCoeff=0.4405;MQ=82.28;MQ0=2;MQRankSum=-0.058;QD=9.57;ReadPosRankSum=3.535;VQSLOD=2.9744;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:50.80:0,51,468	0/0:2,0:2:5.84:0,6,41	0/0:35,0:20:35.09:0,35,379	0/1:19,0:12:11.62:12,0,101	0/0:10,0:10:2.97:0,3,20	1/1:2,6:8:11.13:228,11,0	1/1:0,17:17:36.12:481,36,0	0/0:6,0:6:9:0,9,77	0/0:7,0:7:17.89:0,18,151	1/1:5,0:5:1.55:4,2,0	0/0:5,0:5:3.72:0,4,36	0/0:6,0:6:15.16:0,15,116	0/0:13,0:13:35.86:0,36,364	0/0:14,0:14:20.76:0,21,209	0/0:13,0:13:29.68:0,30,213	0/0:4,0:4:7.21:0,7,50	0/1:12,0:11:3.63:4,0,48	0/0:13,0:13:8.91:0,9,75	0/0:6,0:6:14.74:0,15,92	0/0:9,0:9:17.81:0,18,128	0/0:10,0:10:26.49:0,26,175	0/0:9,0:9:20.98:0,21,226	0/0:5,0:5:8.98:0,9,102	0/0:11,0:11:11.33:0,11,164	0/0:7,0:7:0.81:0,1,23	0/0:5,0:5:7.42:0,7,76	0/0:16,0:15:38.40:0,38,274	0/0:1,0:1:1.25:0,1,3
chr10	47158178	.	A	ATT	10852.05	PASS	AB=0.780;AC=52;AF=0.929;AN=56;BaseQRankSum=-2.663;DP=538;FS=2.192;HRun=9;HaplotypeScore=108.9979;InbreedingCoeff=0.4448;MQ=70.57;MQ0=0;MQRankSum=-3.578;QD=20.75;ReadPosRankSum=1.695;VQSLOD=3.8922;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:30:23.35:148,23,0	1/1:4,0:11:24.20:96,24,0	0/0:15,0:11:12.94:0,13,149	0/1:16,0:13:15.18:15,0,101	1/1:6,0:12:30.20:288,30,0	1/1:3,0:27:57.39:197,57,0	1/1:5,0:26:39.49:152,39,0	1/1:18,2:29:54.56:555,55,0	1/1:1,10:13:29.58:424,30,0	1/1:13,0:26:51.55:528,52,0	1/1:5,0:19:33.95:331,34,0	1/1:4,13:20:47.63:665,48,0	1/1:5,11:18:38.58:531,39,0	1/1:6,0:21:36.06:352,36,0	0/1:5,1:23:17.36:128,0,17	1/1:2,11:13:30.10:462,30,0	1/1:8,0:21:38.83:359,39,0	1/1:3,0:25:48.04:451,48,0	1/1:4,24:29:75.22:1108,75,0	1/1:2,17:22:53.11:730,53,0	1/1:0,16:18:44.64:655,45,0	1/1:0,9:11:23.09:301,23,0	1/1:1,9:10:24.08:362,24,0	1/1:3,10:13:27.09:416,27,0	1/1:9,0:19:31.30:300,31,0	1/1:13,0:22:45.06:435,45,0	1/1:5,15:22:48.16:736,48,0	1/1:1,0:6:12.02:127,12,0
chr10	47158648	.	C	CT	1992.17	PASS	AB=0.771;AC=21;AF=0.375;AN=56;BaseQRankSum=-0.590;DP=629;FS=0.440;HRun=14;HaplotypeScore=79.5374;InbreedingCoeff=0.3527;MQ=59.88;MQ0=9;MQRankSum=0.207;QD=6.02;ReadPosRankSum=-0.503;VQSLOD=2.4696;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:42:11.74:150,12,0	0/1:8,1:11:17.98:30,0,18	0/0:20,0:12:4.35:0,4,23	0/1:9,0:6:1.42:1,0,44	0/0:25,0:28:38.76:0,39,240	0/0:21,0:21:31.40:0,31,193	0/0:14,0:17:15.54:0,16,88	0/0:20,0:21:2.89:0,3,121	1/1:10,7:17:3.85:174,4,0	0/0:26,0:26:43.97:0,44,283	0/0:16,0:18:30.59:0,31,184	0/1:8,7:15:12.80:21,0,13	1/1:14,11:25:33.04:265,33,0	0/0:20,0:23:33.08:0,33,194	0/0:22,3:25:16.76:0,17,218	1/1:8,14:22:19.24:161,19,0	0/0:22,1:25:18:0,18,221	0/0:31,1:34:43:0,43,388	0/1:9,4:14:8.89:101,0,9	0/1:11,8:21:8.09:94,0,8	0/1:11,6:16:15.25:115,0,15	1/1:10,15:25:28.20:233,28,0	0/1:4,9:11:3.39:91,0,3	0/1:13,22:36:0.53:260,0,1	0/0:22,1:25:9.09:0,9,176	0/1:22,4:29:51.41:55,0,51	1/1:19,9:30:35.18:423,35,0	0/0:9,0:10:10.83:0,11,63
chr10	47159676	.	G	GACACACACAC	9146.67	PASS	AB=0.848;AC=28;AF=0.500;AN=56;BaseQRankSum=-1.091;DP=710;FS=5.957;HRun=0;HaplotypeScore=218.5202;InbreedingCoeff=0.8226;MQ=53.72;MQ0=6;MQRankSum=-7.997;QD=24.13;ReadPosRankSum=-4.612;VQSLOD=2.4469;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:31,0:31:21.54:495,22,0	1/1:6,2:15:15.01:570,15,0	0/0:29,0:16:3.01:0,3,40	0/0:23,0:13:6.02:0,6,96	0/0:16,0:16:18.06:0,18,430	0/0:24,0:27:53.39:0,53,1426	0/0:36,0:38:57.16:0,57,1380	0/1:29,0:28:0.65:1,0,324	1/1:13,12:34:26.76:972,27,0	0/0:22,0:26:43.15:0,43,1121	0/0:9,0:10:21.07:0,21,509	1/1:17,5:27:18.01:691,18,0	1/1:15,9:26:27.56:1044,28,0	0/0:22,0:29:60.15:0,60,1502	1/1:12,12:28:21.07:986,21,0	1/1:16,12:31:30.94:1408,31,0	0/0:34,0:37:69.19:0,69,1874	0/0:24,0:27:51.16:0,51,1310	1/1:14,0:14:21:387,21,0	1/1:14,1:18:17.73:466,18,0	1/1:34,0:33:6.01:125,6,0	1/1:19,2:22:15.99:488,16,0	1/1:18,1:19:8.89:198,9,0	1/1:25,1:27:24.11:665,24,0	0/0:20,0:27:51.15:0,51,1319	0/0:25,0:32:10.68:0,11,1276	0/1:13,8:23:8.50:652,0,8	0/0:8,0:10:27.09:0,27,645
chr10	47160613	.	CTTTT	C	510.68	PASS	AB=0.690;AC=5;AF=0.093;AN=54;BaseQRankSum=1.150;DP=530;FS=35.194;HRun=11;HaplotypeScore=103.9195;InbreedingCoeff=0.7120;MQ=45.58;MQ0=20;MQRankSum=-5.005;QD=10.87;ReadPosRankSum=4.210;VQSLOD=-0.5634;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:16,13:26:15.95:300,0,16	1/1:3,5:8:11.98:187,12,0	./.	0/0:4,0:4:0:0,0,0	0/0:28,0:25:61.62:0,62,1204	0/0:17,0:16:30.10:0,30,640	0/0:14,0:11:27.56:0,28,621	0/0:28,0:29:72.19:0,72,1575	0/0:11,0:11:33.03:0,33,573	0/0:23,0:23:48.13:0,48,1040	0/0:16,0:15:27.54:0,28,462	0/0:20,0:18:42.01:0,42,678	0/0:15,0:15:39.10:0,39,824	0/0:18,0:18:39.02:0,39,879	1/1:2,8:10:9.01:141,9,0	0/0:18,0:17:30.57:0,31,723	0/0:42,0:41:46.62:0,47,907	0/0:34,0:32:47.68:0,48,1011	0/0:17,0:15:36.08:0,36,769	0/0:16,0:16:33.11:0,33,710	0/0:17,0:17:36.07:0,36,775	0/0:15,0:15:25.33:0,25,491	0/0:12,0:13:24.08:0,24,539	0/0:15,0:13:18.43:0,18,240	0/0:20,0:19:51.13:0,51,1019	0/0:21,0:21:51.17:0,51,1065	0/0:29,0:28:65.98:0,66,1351	0/0:25,0:24:45.15:0,45,1051
chr10	47163581	.	C	CGG	645.92	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=0.678;DP=548;FS=0.795;HRun=3;HaplotypeScore=135.1997;InbreedingCoeff=0.9459;MQ=56.07;MQ0=8;MQRankSum=1.052;QD=13.18;ReadPosRankSum=-2.650;VQSLOD=-0.3478;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:57.17:0,57,736	0/0:7,0:7:11.99:0,12,142	0/0:15,0:13:24.06:0,24,403	0/0:25,0:18:33.13:0,33,530	0/0:19,0:18:29.86:0,30,386	1/1:12,1:13:37.26:533,37,0	1/1:8,28:36:22.71:234,23,0	0/0:26,0:26:69.12:0,69,901	0/0:15,0:15:39.08:0,39,413	0/0:23,0:22:54.08:0,54,623	0/0:16,0:16:18.03:0,18,244	0/0:17,0:15:29.91:0,30,334	0/0:19,0:19:32.47:0,32,376	0/0:17,0:17:42.05:0,42,498	0/0:19,0:18:27.96:0,28,332	0/0:16,0:15:24.03:0,24,278	0/0:26,0:26:37.40:0,37,442	0/0:17,0:17:33.05:0,33,389	0/0:10,0:10:26.82:0,27,335	0/0:7,0:7:13.95:0,14,170	0/0:53,0:53:99:0,121,1512	0/0:11,0:11:21.05:0,21,253	0/0:13,0:12:27.09:0,27,370	0/0:41,0:41:91.08:0,91,1092	0/0:15,0:13:26.96:0,27,284	0/0:27,0:26:68.87:0,69,829	0/0:9,0:9:23.93:0,24,265	0/0:5,0:5:11.99:0,12,126
chr10	47163584	.	GCACACACACA	G	3684.35	PASS	AB=0.745;AC=23;AF=0.426;AN=54;BaseQRankSum=2.460;DP=543;FS=1.288;HRun=0;HaplotypeScore=184.1441;InbreedingCoeff=0.4372;MQ=55.03;MQ0=10;MQRankSum=-6.380;QD=15.22;ReadPosRankSum=0.065;VQSLOD=2.4005;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:31:21.04:0,21,362	1/1:3,4:7:6.01:115,6,0	0/0:14,0:12:0:0,0,0	./.	1/1:11,6:17:2.23:87,2,0	0/0:14,0:13:27.08:0,27,785	0/0:33,0:34:22.32:0,22,647	0/1:23,0:23:4.80:7,0,5	0/1:6,0:17:32.99:33,0,101	1/1:12,6:17:30.10:761,30,0	0/0:10,5:14:0:0,0,0	0/0:11,0:17:10.80:0,11,65	0/1:13,1:20:52.09:89,0,52	1/1:12,3:16:21.05:467,21,0	1/1:8,8:17:15.11:336,15,0	0/1:8,0:15:24.08:24,0,71	1/1:25,2:26:14.75:298,15,0	0/1:10,7:17:42.87:169,0,43	0/0:12,0:11:3.01:0,3,69	0/0:5,0:6:3.01:0,3,77	0/0:56,0:58:75.16:0,75,2341	0/0:7,0:10:3.01:0,3,45	0/0:13,0:12:3.01:0,3,44	0/0:32,0:44:48.01:0,48,634	1/1:7,7:13:20.72:417,21,0	1/1:20,5:24:28.90:661,29,0	0/0:8,0:8:12.04:0,12,474	1/1:2,3:5:9.03:221,9,0
chr10	47166094	.	TG	T	3080.92	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=7.007;DP=686;FS=26.742;HRun=3;HaplotypeScore=82.1635;InbreedingCoeff=0.9995;MQ=92.53;MQ0=0;MQRankSum=-3.083;QD=31.44;ReadPosRankSum=0.233;VQSLOD=1.6828;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,129,1836	0/0:9,0:9:27.09:0,27,385	0/0:39,0:39:90.43:0,90,1196	0/0:31,0:32:81.24:0,81,1116	0/0:27,0:27:63.12:0,63,849	0/0:26,0:25:69.20:0,69,939	0/0:24,0:24:69.15:0,69,931	0/0:41,0:41:99:0,123,1733	0/0:19,0:19:54.11:0,54,733	0/0:28,0:28:81.26:0,81,1131	0/0:17,0:17:45.08:0,45,591	0/0:26,0:26:72.09:0,72,930	0/0:25,0:25:69.23:0,69,992	0/0:21,0:21:57.19:0,57,818	0/0:21,0:21:51.08:0,51,681	0/0:10,0:10:30.06:0,30,401	0/0:15,0:15:45.15:0,45,647	0/0:18,0:18:48.15:0,48,674	1/1:0,19:19:54.14:644,54,0	1/1:2,25:27:75.24:928,75,0	1/1:1,18:19:51.02:593,51,0	0/0:20,0:20:48.08:0,48,641	0/0:28,0:28:81.17:0,81,1094	0/0:26,0:26:72.22:0,72,1015	0/0:21,0:21:60.16:0,60,827	0/0:33,0:33:87.28:0,87,1218	1/1:0,33:33:87.27:1077,87,0	0/0:15,0:15:42.14:0,42,604
chr10	47166166	.	G	GAGTCCCCC	1036.23	PASS	AB=0.690;AC=28;AF=0.933;AN=30;BaseQRankSum=-2.487;DP=35;FS=16.435;HRun=0;HaplotypeScore=15.5686;InbreedingCoeff=-0.2561;MQ=134.53;MQ0=1;MQRankSum=-1.818;QD=35.73;ReadPosRankSum=-0.670;VQSLOD=1.2537;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,0:1:3.01:47,3,0	./.	0/1:2,0:4:42.20:168,0,42	0/1:3,1:5:32.86:211,0,33	./.	./.	1/1:1,0:2:3.01:72,3,0	1/1:3,0:3:3.01:47,3,0	1/1:1,0:1:2.99:24,3,0	1/1:2,0:2:3.01:56,3,0	./.	./.	1/1:1,0:2:6:145,6,0	1/1:1,0:1:3:25,3,0	./.	./.	./.	1/1:1,0:1:2.99:23,3,0	./.	./.	./.	1/1:1,0:2:3.01:74,3,0	1/1:0,0:1:3.01:73,3,0	./.	1/1:1,0:1:3.01:48,3,0	1/1:1,0:1:3.01:92,3,0	1/1:1,0:1:2.97:20,3,0	./.
chr10	47166544	.	T	TC	312.81	PASS	AB=1.000;AC=28;AF=0.875;AN=32;BaseQRankSum=-2.012;DP=46;FS=8.113;HRun=1;HaplotypeScore=14.3741;InbreedingCoeff=0.0031;MQ=125.80;MQ0=0;MQRankSum=-1.714;QD=7.82;ReadPosRankSum=-2.311;VQSLOD=-0.5998;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,0:1:3:25,3,0	1/1:1,0:1:3:25,3,0	1/1:6,1:7:1.21:50,1,0	0/1:5,0:4:11.87:14,0,12	./.	./.	1/1:2,0:2:2.97:20,3,0	0/1:4,0:4:0:1,0,0	1/1:2,0:2:2.97:20,3,0	./.	1/1:1,2:3:3.01:38,3,0	1/1:0,3:3:3.01:38,3,0	1/1:0,2:2:3.01:39,3,0	0/1:1,0:1:0:0,0,0	./.	0/1:1,0:1:0:0,0,0	./.	1/1:2,0:2:2.99:24,3,0	./.	./.	./.	./.	./.	1/1:1,2:3:3.01:39,3,0	./.	1/1:0,1:1:3.01:38,3,0	1/1:2,0:2:2.97:20,3,0	./.
chr10	47166711	.	GTGTATATGTACACGCA	G	755.05	PASS	AB=1.000;AC=8;AF=0.143;AN=56;BaseQRankSum=5.051;DP=1026;FS=11.439;HRun=0;HaplotypeScore=482.3199;InbreedingCoeff=0.0718;MQ=52.52;MQ0=13;MQRankSum=-4.459;QD=4.27;ReadPosRankSum=-6.028;VQSLOD=-0.4362;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:2.16:0,2,23	0/1:6,0:6:78.60:162,0,79	0/0:44,0:22:42.91:0,43,821	0/0:58,0:18:11.03:0,11,359	0/0:38,0:38:39.13:0,39,1972	0/1:16,0:15:74.89:75,0,177	1/1:14,0:14:8.40:54,8,0	0/0:53,0:53:99:0,135,4856	0/1:41,0:41:84.72:85,0,2275	0/0:60,0:60:99:0,172,9519	0/0:32,0:32:42.12:0,42,1998	0/0:34,0:34:18.35:0,18,781	0/1:42,0:42:95.20:95,0,2709	0/0:41,0:41:77.88:0,78,4248	0/1:21,0:21:99:322,0,207	0/1:37,0:37:98.60:99,0,884	0/0:33,0:33:78.17:0,78,3621	0/0:26,0:26:66.23:0,66,2990	0/0:27,0:26:69.19:0,69,2857	0/0:54,0:54:99:0,141,6755	0/0:90,0:90:99:0,256,12249	0/0:30,4:34:41.36:0,41,1802	0/0:26,11:37:33.11:0,33,1410	0/0:25,0:25:33.11:0,33,1137	0/0:30,0:30:78.20:0,78,3684	0/0:47,0:47:99:0,124,5873	0/0:38,0:38:71:0,71,3759	0/0:29,0:29:81.28:0,81,4465
chr10	47166720	.	TACACGC	T	1121.23	PASS	AB=0.664;AC=6;AF=0.107;AN=56;BaseQRankSum=7.849;DP=990;FS=17.737;HRun=0;HaplotypeScore=317.8792;InbreedingCoeff=0.5978;MQ=54.09;MQ0=10;MQRankSum=-6.586;QD=21.16;ReadPosRankSum=-3.088;VQSLOD=1.6778;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,11:16:3.27:75,3,0	0/1:2,3:5:0.97:144,0,1	0/0:41,0:21:41.38:0,41,1113	0/0:57,0:17:25.18:0,25,392	0/0:35,0:35:48.14:0,48,1661	1/1:4,9:13:22.70:522,23,0	0/0:3,6:9:1.21:0,1,32	0/0:56,0:56:99:0,166,5704	0/0:43,0:43:50.41:0,50,2175	0/0:62,0:62:99:0,187,6468	0/0:33,0:33:51.17:0,51,1752	0/0:29,0:29:17.65:0,18,619	0/0:38,0:38:44.16:0,44,2342	0/0:39,0:39:90.30:0,90,3061	0/1:11,8:19:99:506,0,117	0/0:33,0:33:42.21:0,42,1003	0/0:29,0:29:72.25:0,72,2504	0/0:25,0:25:75.26:0,75,2629	0/0:26,0:26:75.21:0,75,2497	0/0:52,0:52:99:0,154,5322	0/0:95,0:94:99:0,280,9722	0/0:32,0:32:42.14:0,42,1494	0/0:33,0:33:33.08:0,33,1208	0/0:23,0:23:33.11:0,33,1167	0/0:35,0:35:87.30:0,87,3006	0/0:46,1:47:64.62:0,65,4393	0/0:35,0:35:72.11:0,72,2542	0/0:28,0:28:84.29:0,84,3024
chr10	47168501	.	ATGTGTGTG	A	2721.21	PASS	AB=0.776;AC=21;AF=0.389;AN=54;BaseQRankSum=0.983;DP=558;FS=0.000;HRun=0;HaplotypeScore=172.4124;InbreedingCoeff=0.5649;MQ=56.18;MQ0=3;MQRankSum=-8.069;QD=9.90;ReadPosRankSum=-2.658;VQSLOD=1.9716;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:33:19.82:0,20,653	0/0:4,0:8:7.63:0,8,190	0/0:19,0:9:3.01:0,3,96	0/0:16,0:14:3.48:0,3,35	1/1:12,7:20:0.34:1,0,0	0/0:12,0:12:18.06:0,18,664	0/0:23,0:43:47.45:0,47,1547	./.	0/0:12,0:19:21.06:0,21,462	0/1:11,2:26:38.10:314,0,38	1/1:5,0:8:1.41:3,1,0	0/0:7,0:16:27.09:0,27,581	0/0:6,0:16:27.09:0,27,641	1/1:10,10:23:24.38:492,24,0	0/0:5,0:9:18.04:0,18,362	0/0:5,0:11:17.78:0,18,275	1/1:20,11:31:15.05:378,15,0	0/1:28,5:34:70.98:266,0,71	1/1:6,4:10:15.05:324,15,0	1/1:2,4:6:3.48:77,3,0	0/1:53,12:65:85.90:100,0,86	0/0:6,0:11:15.05:0,15,323	0/0:5,0:8:12.04:0,12,288	0/0:17,0:34:45.07:0,45,892	1/1:11,9:21:9.03:205,9,0	1/1:9,8:17:24.08:573,24,0	0/0:9,2:11:0:0,0,0	1/1:9,2:13:8.92:167,9,0
chr10	47168922	.	CG	C	10565.53	PASS	AC=44;AF=1.000;AN=44;DP=292;FS=0.000;HRun=1;HaplotypeScore=95.4907;InbreedingCoeff=-0.0269;MQ=61.67;MQ0=0;QD=36.18;VQSLOD=4.8186;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,26:26:72.24:1006,72,0	1/1:0,3:3:9.03:121,9,0	1/1:0,3:3:3.01:42,3,0	./.	./.	./.	1/1:0,36:36:90.30:1258,90,0	1/1:0,11:11:30.07:381,30,0	1/1:0,6:6:15.05:204,15,0	1/1:0,7:7:21.07:289,21,0	./.	1/1:0,9:9:27.09:377,27,0	1/1:0,6:6:18.02:230,18,0	1/1:0,13:13:36.03:459,36,0	1/1:0,5:5:15.05:210,15,0	1/1:0,3:3:9.03:126,9,0	1/1:0,28:28:72.24:1007,72,0	1/1:0,13:13:33.11:461,33,0	1/1:0,9:9:27.09:378,27,0	./.	1/1:0,55:55:99:1837,132,0	1/1:0,6:6:12.04:168,12,0	1/1:0,1:1:3.01:42,3,0	1/1:0,33:33:90.30:1258,90,0	1/1:0,6:6:12.04:168,12,0	1/1:0,9:9:27.09:378,27,0	1/1:0,4:4:12.04:168,12,0	./.
chr10	47171587	.	AGCTGGGCCTTGTG	A	17158.32	PASS	AC=50;AF=0.926;AN=54;BaseQRankSum=5.005;DP=679;FS=16.754;HRun=0;HaplotypeScore=237.7263;InbreedingCoeff=0.5248;MQ=66.74;MQ0=0;MQRankSum=-5.216;QD=27.11;ReadPosRankSum=7.429;VQSLOD=2.1493;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:32,14:46:12.04:413,12,0	1/1:1,5:6:9.03:257,9,0	0/0:19,0:19:12.10:0,12,906	0/0:17,0:17:33.11:0,33,1202	1/1:17,3:20:4.26:220,4,0	1/1:15,8:23:16.30:642,16,0	1/1:10,12:22:18.06:638,18,0	./.	1/1:17,18:35:39.13:1395,39,0	1/1:16,2:18:6.02:223,6,0	1/1:10,5:15:1.25:109,1,0	1/1:12,24:36:42.14:1546,42,0	1/1:14,15:29:30.10:1117,30,0	1/1:20,16:36:30.57:1099,31,0	1/1:12,14:26:21.05:764,21,0	1/1:8,18:26:48.16:1770,48,0	1/1:14,20:34:30.10:1117,30,0	1/1:12,14:26:15.05:559,15,0	1/1:17,6:23:18.01:432,18,0	1/1:7,5:12:10.28:426,10,0	1/1:45,11:56:0.73:214,1,0	1/1:9,7:16:15.05:558,15,0	1/1:12,1:13:1.25:109,1,0	1/1:15,21:36:25.33:976,25,0	1/1:12,2:14:1.25:109,1,0	1/1:23,14:37:38.94:1143,39,0	1/1:9,14:23:26.43:989,26,0	1/1:0,5:5:9.03:335,9,0
chr10	47172077	.	GGCCC	G	10371.24	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=13.908;DP=611;FS=0.321;HRun=0;HaplotypeScore=112.8078;InbreedingCoeff=0.9975;MQ=87.17;MQ0=0;MQRankSum=-7.757;QD=44.70;ReadPosRankSum=2.094;VQSLOD=5.1190;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,141,3705	1/1:0,11:11:27.01:432,27,0	0/0:23,0:23:63.15:0,63,1530	0/0:21,0:21:24.70:0,25,1090	1/1:1,17:18:21.07:392,21,0	0/0:19,0:19:54.19:0,54,1424	0/0:35,0:35:93.32:0,93,2468	1/1:6,23:29:75.23:1336,75,0	0/0:16,0:16:48.16:0,48,1236	1/1:2,12:14:33.08:551,33,0	1/1:0,7:7:18.06:332,18,0	0/0:12,0:12:36.12:0,36,960	0/0:25,0:25:66.23:0,66,1758	1/1:0,28:28:66.23:1231,66,0	1/1:0,20:20:57.20:1064,57,0	0/0:22,0:22:66.23:0,66,1751	1/1:3,35:38:87.26:1588,87,0	1/1:0,26:26:75.21:1364,75,0	0/0:23,0:23:63.22:0,63,1678	0/0:17,0:17:51.17:0,51,1273	0/0:46,0:46:99:0,126,3235	0/0:10,0:10:30.10:0,30,787	0/0:13,0:13:36.12:0,36,888	0/0:29,0:29:87.30:0,87,2269	1/1:0,18:18:45.15:839,45,0	1/1:0,15:15:45.11:794,45,0	0/0:20,0:20:51.17:0,51,1313	1/1:0,8:8:24.08:448,24,0
chr10	47174441	.	GT	G	2703.58	PASS	AB=0.976;AC=42;AF=0.750;AN=56;BaseQRankSum=4.486;DP=496;FS=6.527;HRun=1;HaplotypeScore=87.1763;InbreedingCoeff=0.0311;MQ=74.70;MQ0=0;MQRankSum=-0.790;QD=5.76;ReadPosRankSum=9.902;VQSLOD=-0.2216;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:36,1:37:7.83:284,8,0	1/1:5,0:5:6.96:23,7,0	0/0:8,0:8:9.32:0,9,66	0/0:19,0:18:20.47:0,20,120	1/1:10,1:11:2.49:80,2,0	0/1:16,0:16:14:63,0,14	1/1:31,0:31:14.51:152,15,0	0/1:16,1:17:17.97:49,0,18	1/1:22,0:22:24.85:140,25,0	1/1:18,0:18:9.94:110,10,0	0/1:6,1:7:2.54:56,0,3	1/1:18,0:18:34.67:137,35,0	1/1:11,0:11:22.36:90,22,0	1/1:20,0:20:39.96:158,40,0	0/1:13,0:13:10.08:70,0,10	0/1:15,1:16:7.36:97,0,7	1/1:28,1:29:17.94:219,18,0	1/1:28,0:28:38.71:213,39,0	0/1:12,0:12:6.15:48,0,6	0/1:7,0:7:10.61:23,0,11	1/1:44,1:45:5.89:250,6,0	0/1:9,0:9:5.52:41,0,6	1/1:11,1:12:1.64:89,2,0	1/1:27,0:27:18.83:195,19,0	1/1:15,0:15:6.09:78,6,0	0/1:17,0:17:2.57:38,0,3	0/1:19,0:19:7.96:96,0,8	1/1:7,0:7:14.81:57,15,0
chr10	47174448	.	GT	G	2878.93	PASS	AB=0.970;AC=43;AF=0.768;AN=56;BaseQRankSum=5.529;DP=485;FS=1.804;HRun=1;HaplotypeScore=84.8125;InbreedingCoeff=-0.0070;MQ=71.67;MQ0=0;MQRankSum=-1.703;QD=6.26;ReadPosRankSum=11.056;VQSLOD=-0.5883;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:38,2:40:42.75:248,0,43	0/1:6,1:7:8.29:36,0,8	0/0:9,0:9:14.60:0,15,138	0/0:16,0:15:16.42:0,16,111	1/1:11,0:11:3.40:76,3,0	1/1:15,0:15:4.96:69,5,0	1/1:29,1:30:15.21:187,15,0	0/1:14,0:14:16.73:53,0,17	1/1:23,0:23:3.15:141,3,0	0/1:20,0:20:11.45:85,0,11	1/1:6,0:6:12.57:65,13,0	1/1:18,0:18:14.61:131,15,0	1/1:11,0:11:0.43:70,0,0	1/1:19,1:20:1.27:149,1,0	0/1:14,0:14:41.74:80,0,42	1/1:14,0:14:29.75:128,30,0	1/1:28,0:28:36.17:214,36,0	1/1:26,0:26:56.96:237,57,0	0/1:11,0:11:21.18:60,0,21	1/1:5,0:5:11.10:36,11,0	0/1:43,1:44:9.08:224,0,9	0/1:9,0:9:4.50:51,0,4	0/1:12,1:13:39.07:101,0,39	1/1:27,1:28:34.99:220,35,0	1/1:12,1:13:28.32:129,28,0	1/1:16,0:16:0.32:72,0,0	1/1:17,0:17:11.42:113,11,0	1/1:7,0:7:15.08:60,15,0
chr10	47178723	.	ACGTG	A	1913.88	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.096;DP=831;FS=9.341;HRun=0;HaplotypeScore=131.9414;InbreedingCoeff=0.9919;MQ=83.65;MQ0=0;MQRankSum=-2.207;QD=51.73;ReadPosRankSum=3.784;VQSLOD=4.8168;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:62,0:62:99:0,184,4998	1/1:0,16:16:42.14:839,42,0	0/0:24,0:24:66.22:0,66,1721	0/0:24,0:24:57.19:0,57,1486	0/0:22,0:22:66.23:0,66,1833	0/0:17,0:17:51.17:0,51,1340	0/0:38,0:38:99:0,114,3175	0/0:29,0:29:84.29:0,84,2330	0/0:23,0:23:66.23:0,66,1844	0/0:26,0:26:72.25:0,72,1954	0/0:16,0:16:48.16:0,48,1297	0/0:48,0:48:99:0,144,3951	0/0:37,0:37:99:0,108,2957	0/0:40,0:40:99:0,114,3152	1/1:0,21:21:60.21:1197,60,0	0/0:37,0:37:99:0,108,2948	0/0:31,0:31:93.32:0,93,2563	0/0:32,0:32:87.30:0,87,2340	0/0:20,0:20:54.16:0,54,1400	0/0:23,0:23:69.24:0,69,1926	0/0:76,0:76:99:0,229,6267	0/0:30,0:30:87.30:0,87,2333	0/0:22,0:22:66.23:0,66,1805	0/0:31,0:31:93.32:0,93,2565	0/0:26,0:26:78.25:0,78,2048	0/0:30,0:30:90.31:0,90,2438	0/0:25,0:25:72.25:0,72,2003	0/0:5,0:5:15.05:0,15,419
chr10	47179855	.	TG	T	7735.12	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=14.513;DP=586;FS=0.000;HRun=3;HaplotypeScore=55.6877;InbreedingCoeff=0.9990;MQ=86.69;MQ0=0;MQRankSum=-0.918;QD=34.23;ReadPosRankSum=3.569;VQSLOD=5.2305;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:48.16:0,48,691	0/0:8,0:8:24.08:0,24,344	0/0:26,0:26:69.23:0,69,992	0/0:12,0:12:36.12:0,36,493	0/0:29,0:28:87.29:0,87,1252	0/0:25,0:25:66.19:0,66,913	0/0:18,0:18:54.18:0,54,778	0/0:39,0:39:99:0,105,1495	1/1:1,16:17:48.15:595,48,0	0/0:23,0:23:69.22:0,69,975	0/0:23,0:23:69.23:0,69,991	1/1:1,10:11:30.09:372,30,0	1/1:0,15:15:45.14:558,45,0	0/0:19,0:19:57.18:0,57,797	0/0:27,0:27:75.24:0,75,1062	1/1:3,23:26:66.21:818,66,0	0/0:16,0:16:45.15:0,45,648	0/0:29,0:29:78.26:0,78,1121	1/1:3,12:15:36.11:446,36,0	1/1:0,26:26:75.24:930,75,0	1/1:0,12:12:33.10:409,33,0	1/1:0,25:25:69.22:855,69,0	1/1:1,16:17:42.13:521,42,0	1/1:0,25:25:69.22:855,69,0	0/0:19,0:19:57.18:0,57,805	0/0:22,0:22:66.22:0,66,951	1/1:0,37:37:99:1375,111,0	0/0:7,0:7:21.07:0,21,302
chr10	47181342	.	T	TC	6178.82	PASS	AB=0.917;AC=51;AF=0.911;AN=56;BaseQRankSum=-2.948;DP=445;FS=9.677;HRun=1;HaplotypeScore=231.5482;InbreedingCoeff=0.4525;MQ=30.01;MQ0=47;MQRankSum=0.401;QD=15.45;ReadPosRankSum=-2.901;VQSLOD=2.6630;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:20,5:25:25.33:299,25,0	1/1:8,6:13:29.56:380,30,0	0/0:18,0:1:2.97:0,3,20	0/0:25,0:2:5.99:0,6,59	1/1:7,9:16:5.55:54,6,0	0/1:10,0:11:7.66:8,0,17	1/1:9,2:10:11.70:115,12,0	1/1:8,2:8:12.92:163,13,0	1/1:7,14:22:53.19:708,53,0	1/1:11,6:20:20.11:308,20,0	1/1:5,6:11:6.18:92,6,0	1/1:18,0:18:14.24:337,14,0	1/1:19,3:24:29.27:342,29,0	1/1:6,8:14:15.05:221,15,0	1/1:14,10:25:16.79:327,17,0	1/1:18,0:20:31.29:377,31,0	1/1:8,9:13:29.79:385,30,0	1/1:8,6:8:18.06:267,18,0	1/1:5,0:3:3.01:38,3,0	1/1:10,3:14:19.30:175,19,0	1/1:7,9:13:5.66:94,6,0	1/1:19,0:19:21.17:284,21,0	1/1:13,2:18:17.98:266,18,0	1/1:5,0:5:5.99:60,6,0	1/1:8,3:12:7.07:134,7,0	1/1:8,5:12:19.88:274,20,0	1/1:13,1:14:23.67:293,24,0	1/1:1,6:6:12.04:178,12,0
chr10	47181343	.	C	CT	1810.76	PASS	AB=1.000;AC=43;AF=0.796;AN=54;BaseQRankSum=-3.266;DP=345;FS=2.690;HRun=1;HaplotypeScore=158.0118;InbreedingCoeff=0.4625;MQ=29.58;MQ0=51;MQRankSum=0.526;QD=6.94;ReadPosRankSum=-0.917;VQSLOD=0.3586;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:5.41:0,5,16	1/1:12,1:12:26.36:194,26,0	0/0:19,0:1:2.98:0,3,21	0/0:29,0:2:6.02:0,6,81	1/1:15,0:15:2.81:18,3,0	1/1:6,0:6:0.94:3,1,0	1/1:6,0:5:3.39:19,3,0	1/1:8,0:4:6.37:41,6,0	1/1:22,0:22:47.86:381,48,0	1/1:18,1:19:22.16:151,22,0	1/1:11,0:11:7.55:49,8,0	1/1:6,1:7:1.74:24,2,0	1/1:20,0:19:0.40:85,0,0	1/1:12,0:12:14.91:115,15,0	1/1:24,0:24:11.25:140,11,0	1/1:8,1:9:0.03:1,0,0	1/1:16,0:12:23.94:196,24,0	1/1:14,0:8:17.92:138,18,0	./.	0/1:9,0:8:0.11:0,0,1	0/0:10,0:7:3.44:0,3,9	0/0:11,0:10:2.35:0,2,6	1/1:8,0:8:1.85:19,2,0	1/1:3,0:3:0.89:2,1,0	1/1:12,0:12:0.96:45,1,0	1/1:13,0:12:22.69:164,23,0	1/1:7,0:7:7.59:50,8,0	1/1:7,0:6:11.97:99,12,0
chr10	47181351	.	CATG	C	216.66	PASS	AB=1.000;AC=29;AF=0.558;AN=52;BaseQRankSum=2.768;DP=235;FS=39.015;HRun=0;HaplotypeScore=133.2352;InbreedingCoeff=0.4265;MQ=24.04;MQ0=55;MQRankSum=0.147;QD=1.92;ReadPosRankSum=0.830;VQSLOD=0.3997;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,0:10:4.61:21,5,0	1/1:4,1:4:1.70:7,2,0	0/0:25,0:1:3.01:0,3,54	0/0:30,0:2:6.02:0,6,94	0/0:6,0:6:0:0,0,0	1/1:5,0:5:4.87:17,5,0	1/1:2,0:1:2.50:9,2,0	0/0:4,0:2:0:0,0,0	1/1:6,0:6:10.40:33,10,0	0/0:11,1:12:2.84:0,3,23	0/0:3,0:3:0.45:0,0,1	1/1:7,1:8:11.36:42,11,0	0/1:17,0:16:3.93:31,0,4	0/1:3,0:3:0:1,0,0	1/1:13,0:13:12.01:55,12,0	1/1:5,1:6:7.22:30,7,0	0/0:13,0:8:4.36:0,4,30	0/0:12,0:6:7.32:0,7,49	0/0:4,0:2:0:0,0,0	0/1:6,0:5:0.49:0,0,1	1/1:11,0:6:1.58:6,2,0	1/1:9,0:9:9.65:40,10,0	1/1:4,0:4:4.16:16,4,0	1/1:2,0:2:0.47:1,0,0	1/1:6,0:6:7.25:36,7,0	./.	./.	0/0:2,0:1:2.84:0,3,14
chr10	47181362	.	C	CTGA	2619.41	PASS	AB=0.809;AC=29;AF=0.558;AN=52;BaseQRankSum=5.379;DP=367;FS=1.521;HRun=0;HaplotypeScore=245.7828;InbreedingCoeff=-0.3467;MQ=25.67;MQ0=59;MQRankSum=-0.603;QD=9.03;ReadPosRankSum=2.971;VQSLOD=3.2366;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:11,4:15:11.26:167,0,11	1/1:2,3:4:4.83:81,5,0	./.	0/0:38,0:2:6.02:0,6,98	0/1:3,5:8:0.20:0,0,0	1/1:5,3:8:8.45:108,8,0	0/1:5,1:5:46.04:51,0,46	0/0:4,0:3:5.61:0,6,30	0/1:11,5:16:22.75:281,0,23	0/1:10,5:15:74.44:74,0,76	0/1:11,3:14:17.07:17,0,51	1/1:10,5:15:15.43:265,15,0	0/1:19,9:27:26.15:317,0,26	0/1:9,3:12:8.23:8,0,66	0/1:17,8:25:72.58:278,0,73	0/1:10,2:13:56.46:188,0,56	0/1:13,0:8:53.09:53,0,94	0/1:10,1:5:57.64:58,0,92	0/1:6,1:6:5.64:143,0,6	1/1:10,2:11:0.61:21,1,0	0/0:11,0:7:0.43:0,0,1	0/1:5,8:13:18.03:204,0,18	0/1:13,1:14:13.89:158,0,14	0/1:7,0:7:8.82:25,0,9	1/1:10,4:14:25.78:239,26,0	0/1:6,5:11:1.45:1,0,120	1/1:4,4:8:2.93:23,3,0	./.
chr10	47181363	.	C	CTCAG	454.78	PASS	AB=0.996;AC=21;AF=0.420;AN=50;BaseQRankSum=5.566;DP=376;FS=0.000;HRun=0;HaplotypeScore=257.0077;InbreedingCoeff=-0.3091;MQ=25.62;MQ0=61;MQRankSum=0.773;QD=1.89;ReadPosRankSum=1.050;VQSLOD=2.0667;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:15,0:15:19.36:58,0,19	1/1:4,1:4:2.57:11,3,0	./.	0/0:39,0:3:5.62:0,6,91	./.	0/1:8,0:8:12.88:13,0,17	0/1:6,0:5:6.98:7,0,46	0/0:4,0:3:5.83:0,6,34	0/1:16,0:16:60.69:68,0,61	0/0:14,1:15:11.90:0,12,125	0/1:14,0:14:37.18:37,0,41	1/1:15,1:16:11.18:93,11,0	0/1:28,0:27:37.28:37,0,53	0/1:13,0:13:29.79:30,0,69	0/1:25,0:25:41.47:41,0,108	0/1:13,1:14:27.11:27,0,74	0/1:13,0:8:24.93:25,0,58	0/0:11,0:5:3.61:0,4,28	0/0:7,0:6:11.41:0,11,60	0/0:13,0:12:0.55:0,1,3	1/1:11,0:7:2.57:27,3,0	0/1:14,0:14:24.57:35,0,25	0/1:14,0:14:20.62:23,0,21	0/1:7,0:7:7.21:7,0,20	0/1:14,0:14:1.97:49,0,2	0/0:11,0:11:14.99:0,15,142	0/1:8,0:8:9.53:10,0,73	./.
chr10	47181393	.	CT	C	1411.48	PASS	AB=0.811;AC=34;AF=0.630;AN=54;BaseQRankSum=1.183;DP=285;FS=4.248;HRun=1;HaplotypeScore=127.2350;InbreedingCoeff=-0.0634;MQ=22.55;MQ0=90;MQRankSum=-0.631;QD=7.93;ReadPosRankSum=-0.614;VQSLOD=0.7366;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,6:9:2.79:74,3,0	1/1:2,3:5:1.91:40,2,0	0/0:38,0:1:2.98:0,3,21	0/0:52,0:1:3.01:0,3,32	0/0:2,0:3:2.22:0,2,7	1/1:2,0:2:3.01:35,3,0	1/1:3,0:2:1.25:3,1,0	./.	1/1:6,0:6:11.06:109,11,0	0/1:4,5:8:26.57:178,0,27	0/1:10,2:12:30.70:62,0,31	1/1:7,0:7:9.61:78,10,0	1/1:5,0:5:9.03:101,9,0	1/1:5,5:10:5.68:68,6,0	0/1:8,6:14:9.71:85,0,10	0/1:7,0:7:10.20:10,0,65	0/1:13,5:12:13.39:65,0,13	0/1:10,2:6:12.89:76,0,13	1/1:7,0:4:1.72:5,2,0	0/1:7,0:7:11.61:12,0,16	0/0:6,0:2:0:0,0,0	0/1:4,0:3:2.43:28,0,2	1/1:3,0:3:1.54:6,2,0	1/1:4,0:4:4.50:16,4,0	0/1:9,8:17:6.17:130,0,6	0/1:3,7:10:26.35:127,0,26	0/0:4,0:4:3.34:0,3,16	1/1:1,6:6:18.06:246,18,0
chr10	47181406	.	C	CTGA	460.18	PASS	AB=0.993;AC=14;AF=0.259;AN=54;BaseQRankSum=7.701;DP=618;FS=21.233;HRun=0;HaplotypeScore=304.0904;InbreedingCoeff=-0.1581;MQ=28.90;MQ0=78;MQRankSum=-1.413;QD=1.69;ReadPosRankSum=0.943;VQSLOD=1.1239;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:10.76:0,11,615	0/0:9,1:10:26.85:0,27,331	0/0:33,0:1:3:0,3,27	./.	0/1:17,0:17:6.73:7,0,50	0/0:19,0:18:3.68:0,4,399	0/1:16,0:16:3.32:3,0,442	0/0:17,0:7:20.93:0,21,281	0/1:21,0:21:99:135,0,146	0/0:28,1:27:73.61:0,74,807	0/1:27,0:27:11.74:12,0,189	0/1:22,1:23:99:138,0,103	0/1:21,0:21:67.81:68,0,104	0/1:17,0:17:1.28:1,0,164	0/1:30,0:30:47.88:48,0,432	0/1:20,1:21:57.09:57,0,116	0/1:24,0:19:3.42:3,0,331	0/0:20,0:16:35.35:0,35,583	0/1:12,0:10:66.91:67,0,168	0/0:25,0:25:5.21:0,5,166	0/0:21,0:18:18.16:0,18,241	0/1:20,0:20:16.49:16,0,28	0/0:16,0:16:14.01:0,14,88	1/1:23,0:23:10.97:49,11,0	0/0:30,0:30:17.02:0,17,446	0/0:28,0:27:71.26:0,71,863	0/0:14,0:13:12.54:0,13,150	0/0:8,0:8:23.97:0,24,400
chr10	47181468	.	AT	A	1464.57	PASS	AB=0.741;AC=9;AF=0.161;AN=56;BaseQRankSum=11.239;DP=809;FS=4.117;HRun=3;HaplotypeScore=146.6310;InbreedingCoeff=-0.1915;MQ=73.65;MQ0=1;MQRankSum=-9.675;QD=4.63;ReadPosRankSum=0.007;VQSLOD=0.1737;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:48,1:49:99:0,101,1895	0/1:10,7:17:99:174,0,290	0/0:30,0:30:78.22:0,78,1071	0/0:34,0:31:77.95:0,78,1035	0/1:20,18:38:6.01:6,0,502	0/0:25,3:28:41.26:0,41,991	0/0:30,1:31:53.11:0,53,1112	0/0:19,0:19:54.13:0,54,738	0/0:22,0:22:57.16:0,57,792	0/1:28,8:36:99:178,0,898	0/1:16,14:29:99:144,0,518	0/0:27,0:27:78.06:0,78,988	0/0:25,0:25:72.21:0,72,1004	0/0:21,0:21:57.01:0,57,708	0/0:32,0:32:93.31:0,93,1337	0/0:24,0:24:69.20:0,69,970	0/0:33,1:34:56.18:0,56,1221	0/0:23,0:23:69.23:0,69,974	0/0:17,0:17:48.16:0,48,680	0/1:18,19:37:99:316,0,592	0/0:29,0:29:75.25:0,75,1076	0/1:29,13:42:99:100,0,862	0/1:22,12:34:99:227,0,609	0/0:30,0:30:75.16:0,75,1014	0/1:30,14:44:99:378,0,948	0/1:32,6:38:80.10:80,0,1146	0/0:16,0:15:48.16:0,48,690	0/0:2,0:2:5.99:0,6,65
chr10	47182936	.	A	AG	6425.67	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-15.217;DP=759;FS=5.346;HRun=7;HaplotypeScore=73.0645;InbreedingCoeff=0.9998;MQ=81.29;MQ0=0;MQRankSum=-5.348;QD=30.74;ReadPosRankSum=2.651;VQSLOD=5.2073;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:87.11:0,87,833	0/0:12,0:12:27.04:0,27,259	0/0:18,0:18:45.05:0,45,428	0/0:23,0:23:52.55:0,53,472	0/0:26,0:26:60.03:0,60,570	0/0:25,0:25:69.11:0,69,666	0/0:41,0:41:99:0,102,971	0/0:21,0:21:54.07:0,54,516	1/1:2,32:34:90.28:1085,90,0	0/0:36,0:36:93.14:0,93,898	0/0:19,0:19:51.08:0,51,491	1/1:1,30:31:90.28:1087,90,0	1/1:0,34:34:90.28:1087,90,0	0/0:22,0:22:63.10:0,63,610	0/0:34,0:34:93.11:0,93,883	1/1:3,27:31:72.09:848,72,0	0/0:40,0:40:93.09:0,93,885	0/0:24,0:23:60.10:0,60,579	0/0:18,0:18:48.02:0,48,449	0/0:21,0:21:60.09:0,60,579	0/0:57,0:57:99:0,150,1438	1/1:1,23:24:57.17:688,57,0	1/1:0,20:20:57.17:688,57,0	1/1:3,32:35:78.24:942,78,0	0/0:21,0:21:60.09:0,60,575	0/0:23,0:23:60.05:0,60,567	0/0:25,0:25:71.72:0,72,683	0/0:12,0:12:36.06:0,36,348
chr10	47183206	.	AG	A	4361.26	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=11.419;DP=667;FS=13.905;HRun=3;HaplotypeScore=64.4975;InbreedingCoeff=0.9994;MQ=87.98;MQ0=0;MQRankSum=-1.461;QD=33.81;ReadPosRankSum=0.982;VQSLOD=4.0920;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:84.24:0,84,1152	0/0:8,0:8:24.05:0,24,323	0/0:25,0:25:69.22:0,69,948	0/0:24,0:24:54.98:0,55,742	0/0:16,0:16:45.15:0,45,648	0/0:22,0:22:60.19:0,60,842	0/0:27,0:27:81.27:0,81,1166	0/0:39,0:39:99:0,111,1599	0/0:15,0:15:45.15:0,45,648	0/0:18,0:18:51.14:0,51,698	0/0:15,0:15:42.14:0,42,604	0/0:29,0:29:84.26:0,84,1178	0/0:22,0:22:63.21:0,63,903	0/0:26,0:26:78.26:0,78,1121	0/0:32,0:32:93.30:0,93,1320	0/0:22,0:22:66.22:0,66,949	0/0:21,0:21:63.20:0,63,890	0/0:21,0:21:63.15:0,63,859	1/1:0,17:17:51.13:605,51,0	1/1:3,20:23:57.18:707,57,0	1/1:2,61:63:99:2194,178,0	0/0:18,0:18:45.12:0,45,612	0/0:16,0:16:45.14:0,45,629	0/0:33,0:33:93.31:0,93,1339	0/0:16,0:16:42.14:0,42,605	0/0:27,0:27:81.26:0,81,1150	1/1:2,24:26:69.22:855,69,0	0/0:18,0:18:51.17:0,51,734
chr10	47183676	.	CA	C	8027.31	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=19.584;DP=752;FS=19.777;HRun=7;HaplotypeScore=100.3739;InbreedingCoeff=0.9995;MQ=68.72;MQ0=1;MQRankSum=-0.017;QD=27.21;ReadPosRankSum=4.777;VQSLOD=3.3474;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,114,1376	0/0:14,0:14:42.13:0,42,528	0/0:28,0:18:32.24:0,32,333	0/0:27,0:15:23.73:0,24,301	0/0:31,0:31:84.74:0,85,1057	0/0:24,0:24:72.23:0,72,905	0/0:19,0:19:48.15:0,48,603	0/0:33,0:33:81.26:0,81,1018	1/1:4,31:35:90.20:918,90,0	0/0:30,0:30:87.27:0,87,1076	0/0:23,0:23:66.21:0,66,830	1/1:1,27:28:75.13:754,75,0	1/1:2,23:25:60.13:612,60,0	0/0:22,0:22:66.20:0,66,817	0/0:35,0:35:87.27:0,87,1082	1/1:0,28:28:78.18:796,78,0	0/0:25,0:25:72.19:0,72,876	0/0:22,0:22:63.20:0,63,792	1/1:2,20:22:60.12:605,60,0	1/1:1,34:35:99:1039,102,0	1/1:1,10:11:30.07:306,30,0	1/1:6,22:28:66.14:671,66,0	1/1:0,31:31:87.20:887,87,0	1/1:2,16:18:39.09:398,39,0	0/0:28,0:28:78.25:0,78,980	0/0:35,0:35:99:0,102,1272	1/1:0,34:34:99:1041,102,0	0/0:17,0:17:51.12:0,51,595
chr10	47184805	.	TC	T	781.35	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=13.412;DP=514;FS=1.950;HRun=2;HaplotypeScore=96.9574;InbreedingCoeff=0.9779;MQ=64.49;MQ0=3;MQRankSum=-11.407;QD=5.04;ReadPosRankSum=3.995;VQSLOD=0.9549;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,102,1496	0/0:5,0:5:15.02:0,15,202	0/0:22,0:16:41.86:0,42,573	0/0:32,2:29:23.43:0,23,763	0/0:27,0:27:81.21:0,81,1186	0/0:16,0:17:49.89:0,50,680	0/0:24,0:24:72.24:0,72,1069	0/0:25,0:25:72.24:0,72,1051	1/1:16,0:16:24.06:95,24,0	0/0:16,0:16:45.14:0,45,628	0/0:18,0:18:51.16:0,51,745	1/1:13,0:13:24.36:102,24,0	1/1:18,0:18:33.75:170,34,0	0/0:12,0:12:30.09:0,30,430	0/0:25,0:25:70.76:0,71,993	1/1:15,0:15:20.96:99,21,0	0/0:27,0:27:75.20:0,75,1065	0/0:12,0:12:33.07:0,33,469	1/1:8,0:7:12.23:60,12,0	1/1:18,0:18:29.18:128,29,0	1/1:10,1:11:18.38:102,18,0	1/1:16,0:16:18.87:78,19,0	1/1:13,1:14:21.06:70,21,0	1/1:12,0:12:7.89:22,8,0	0/0:21,0:21:51.17:0,51,764	0/0:23,0:23:66.20:0,66,935	1/1:13,0:13:19.82:78,20,0	0/0:15,0:15:45.07:0,45,642
chr10	47184806	.	C	CTCTCT	8014.53	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-8.348;DP=467;FS=0.423;HRun=0;HaplotypeScore=99.1013;InbreedingCoeff=0.9894;MQ=66.38;MQ0=3;MQRankSum=-11.192;QD=70.30;ReadPosRankSum=3.382;VQSLOD=6.3360;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,102,2211	0/0:5,0:5:15.05:0,15,319	0/0:21,0:15:41.53:0,42,796	0/0:32,0:27:43.69:0,44,1191	0/0:27,0:27:81.28:0,81,1855	0/0:18,0:18:49.05:0,49,1045	0/0:24,0:24:72.25:0,72,1617	0/0:25,0:25:72.25:0,72,1564	1/1:0,9:11:30.10:864,30,0	0/0:16,0:16:45.15:0,45,942	0/0:17,0:17:51.18:0,51,1169	1/1:1,9:10:30.10:851,30,0	1/1:0,13:16:42.14:1203,42,0	0/0:12,0:12:30.10:0,30,679	0/0:24,0:24:70.78:0,71,1500	1/1:2,6:8:24.08:625,24,0	0/0:28,0:28:75.99:0,76,1563	0/0:11,0:11:33.11:0,33,706	1/1:0,2:5:15.05:332,15,0	1/1:0,10:14:33.11:917,33,0	1/1:6,5:10:21.04:470,21,0	1/1:0,8:12:30.10:835,30,0	1/1:3,7:10:30.10:863,30,0	1/1:2,7:9:12.04:349,12,0	0/0:19,0:19:51.17:0,51,1158	0/0:23,0:23:66.21:0,66,1374	1/1:0,8:8:24.08:706,24,0	0/0:15,0:15:45.15:0,45,1002
chr10	47184811	.	C	CT	1292.40	PASS	AB=0.973;AC=23;AF=0.411;AN=56;BaseQRankSum=13.238;DP=456;FS=0.927;HRun=3;HaplotypeScore=87.3035;InbreedingCoeff=0.9027;MQ=67.19;MQ0=4;MQRankSum=-11.791;QD=9.79;ReadPosRankSum=-0.486;VQSLOD=0.9669;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,105,1389	0/0:4,0:4:12.04:0,12,164	0/0:27,0:17:35.97:0,36,480	0/1:35,0:28:47.03:47,0,629	0/0:29,0:29:81.27:0,81,1126	0/0:18,0:18:49.95:0,50,655	0/0:26,0:26:78.25:0,78,1072	0/0:25,0:25:69.22:0,69,945	1/1:1,9:10:24.39:145,24,0	0/0:14,0:14:42.14:0,42,582	0/0:18,0:18:54.17:0,54,734	1/1:0,9:9:25.67:159,26,0	1/1:0,13:13:36.73:245,37,0	0/0:12,0:12:30.08:0,30,401	0/0:23,0:23:69.23:0,69,960	1/1:0,6:6:17.29:100,17,0	0/0:26,0:26:71.96:0,72,1010	0/0:12,0:12:32.14:0,32,425	1/1:0,3:3:9.03:143,9,0	1/1:1,10:11:27.90:134,28,0	1/1:4,5:8:14.23:73,14,0	1/1:1,8:9:24.31:108,24,0	1/1:3,7:10:28.44:154,28,0	1/1:1,7:8:11.26:54,11,0	0/0:21,0:21:51.17:0,51,709	0/0:20,0:20:57.18:0,57,773	1/1:0,8:8:22.72:152,23,0	0/0:12,0:12:36.12:0,36,497
chr10	47184843	.	CCTCTCTCT	C	770.61	PASS	AB=0.981;AC=21;AF=0.583;AN=36;BaseQRankSum=1.758;DP=323;FS=6.730;HRun=0;HaplotypeScore=89.0127;InbreedingCoeff=-0.2935;MQ=58.30;MQ0=28;MQRankSum=0.148;QD=2.74;ReadPosRankSum=-0.612;VQSLOD=0.5911;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:23:17.64:18,0,133	0/0:2,0:4:3.01:0,3,48	0/1:16,0:6:0:0,0,0	./.	0/1:25,0:25:13.49:39,0,13	0/1:16,0:15:9.82:57,0,10	0/1:22,0:18:21.60:37,0,22	0/1:19,0:18:1.63:14,0,2	./.	0/1:12,0:11:4.72:142,0,5	1/1:13,0:13:8.88:110,9,0	./.	1/1:1,0:1:1.55:4,2,0	1/1:7,8:14:6.02:146,6,0	0/1:25,0:30:27.17:27,0,135	./.	0/1:22,1:23:54.09:93,0,54	0/1:12,0:10:12.84:27,0,13	./.	./.	0/0:3,0:1:0.89:0,1,2	./.	./.	1/1:4,0:2:1.25:3,1,0	1/1:16,0:21:4.66:19,5,0	0/1:17,2:17:18.90:146,0,19	./.	./.
chr10	47185046	.	CA	C	11547.99	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=5.353;DP=687;FS=3.243;HRun=1;HaplotypeScore=81.6348;InbreedingCoeff=0.9906;MQ=75.48;MQ0=0;MQRankSum=-4.097;QD=37.49;ReadPosRankSum=2.429;VQSLOD=5.4879;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:96.26:0,96,1459	0/0:13,0:13:39.13:0,39,616	0/0:14,0:14:22.64:0,23,484	0/0:15,0:15:20.46:0,20,399	0/0:16,0:16:45.15:0,45,716	0/0:23,0:23:69.22:0,69,1073	0/0:38,0:38:99:0,114,1766	0/0:30,0:30:87.27:0,87,1323	1/1:0,21:21:63.21:877,63,0	0/0:29,0:29:87.30:0,87,1391	0/0:25,0:25:72.23:0,72,1128	1/1:0,28:28:81.27:1129,81,0	1/1:0,28:28:72.24:1003,72,0	0/0:22,0:22:63.20:0,63,983	0/0:23,0:23:66.21:0,66,1027	1/1:0,22:22:57.19:794,57,0	0/0:29,0:29:87.28:0,87,1368	0/0:15,0:14:45.15:0,45,720	1/1:0,25:25:72:999,72,0	1/1:0,31:31:93.31:1299,93,0	1/1:0,40:40:99:1425,102,0	1/1:0,20:20:54.18:754,54,0	1/1:0,19:19:47.78:671,48,0	1/1:0,41:41:99:1467,105,0	0/0:20,0:20:60.19:0,60,936	0/0:30,0:29:84.28:0,84,1323	1/1:0,33:33:81.27:1130,81,0	0/0:3,0:3:9.03:0,9,144
chr10	47185700	.	CCT	C	6946.02	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=13.472;DP=622;FS=1.076;HRun=0;HaplotypeScore=76.9101;InbreedingCoeff=0.9926;MQ=92.30;MQ0=0;MQRankSum=-1.942;QD=34.05;ReadPosRankSum=1.846;VQSLOD=7.1494;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,144,2533	1/1:1,6:7:12.04:164,12,0	0/0:22,0:22:57.13:0,57,897	0/0:33,0:33:93.22:0,93,1487	1/1:3,8:11:21.07:288,21,0	0/0:20,0:20:57.20:0,57,1002	0/0:32,0:32:90.31:0,90,1596	1/1:0,24:24:72.20:935,72,0	0/0:18,0:18:51.14:0,51,842	1/1:3,19:22:54.18:740,54,0	1/1:0,9:9:24.08:328,24,0	0/0:34,0:34:99:0,99,1729	0/0:31,0:31:87.22:0,87,1478	1/1:2,21:23:54.18:742,54,0	1/1:1,21:22:57.19:783,57,0	0/0:22,0:22:63.17:0,63,1085	1/1:0,28:28:81.27:1113,81,0	1/1:2,15:17:39.13:536,39,0	0/0:19,0:19:54.13:0,54,776	0/0:15,0:15:36.11:0,36,605	0/0:55,0:55:99:0,160,2769	0/0:13,0:13:39.13:0,39,686	0/0:10,0:10:18.06:0,18,319	0/0:28,0:28:84.27:0,84,1460	1/1:4,14:18:39.13:536,39,0	1/1:3,13:16:39.13:534,39,0	0/0:15,0:15:42.11:0,42,687	1/1:0,7:7:18.06:247,18,0
chr10	47187822	.	AAC	A	191.74	PASS	AB=0.926;AC=11;AF=0.212;AN=52;BaseQRankSum=2.491;DP=734;FS=0.744;HRun=0;HaplotypeScore=115.1204;InbreedingCoeff=-0.1623;MQ=56.55;MQ0=6;MQRankSum=3.075;QD=0.73;ReadPosRankSum=0.655;VQSLOD=2.2695;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:44:47.91:0,48,445	0/0:8,0:7:9.01:0,9,84	./.	./.	0/0:16,0:16:4.50:0,4,48	0/0:7,0:11:2.52:0,3,26	0/0:46,0:44:14.19:0,14,136	0/0:19,0:18:15.75:0,16,89	0/1:35,7:42:32.79:33,0,615	0/0:31,0:29:27.65:0,28,214	1/1:12,0:12:0.89:2,1,0	0/1:30,3:33:87.30:87,0,430	0/1:25,1:27:14.07:14,0,252	0/0:29,0:43:2.41:0,2,26	0/1:9,0:20:0.85:1,0,20	0/1:27,3:31:92.77:93,0,413	0/0:21,0:28:8.93:0,9,66	0/0:27,0:26:31.52:0,32,237	0/1:13,0:13:1.26:1,0,81	0/1:17,1:18:9.04:9,0,234	0/0:72,0:73:61.20:0,61,1167	0/0:25,0:25:15.30:0,15,364	0/0:13,0:13:12.04:0,12,176	0/1:40,2:46:41.45:41,0,641	0/0:7,0:15:2.74:0,3,12	0/0:24,0:24:44.23:0,44,284	0/1:17,4:21:32.37:32,0,285	0/0:11,0:13:9.37:0,9,69
chr10	47188690	.	T	TC	1266.55	PASS	AB=0.782;AC=40;AF=0.741;AN=54;BaseQRankSum=-2.348;DP=319;FS=9.943;HRun=10;HaplotypeScore=47.7589;InbreedingCoeff=-0.1876;MQ=81.38;MQ0=1;MQRankSum=-0.614;QD=4.28;ReadPosRankSum=-1.455;VQSLOD=-0.3157;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:15,4:19:20.02:20,0,62	1/1:3,0:2:2.99:24,3,0	0/0:13,0:14:20.81:0,21,152	0/1:12,1:13:22.88:44,0,23	1/1:2,0:2:2.99:24,3,0	0/1:9,0:9:11.44:11,0,62	0/1:17,11:29:99:291,0,100	1/1:7,0:7:0.47:1,0,0	1/1:7,4:11:15.04:160,15,0	1/1:7,1:8:3:26,3,0	1/1:7,0:7:1.13:17,1,0	0/1:5,10:15:34.24:81,0,34	0/1:8,10:18:18.63:26,0,19	1/1:5,0:5:5.95:44,6,0	1/1:1,0:5:2.96:19,3,0	1/1:2,11:13:3.01:32,3,0	1/1:9,0:9:11.85:78,12,0	1/1:5,0:6:2.99:26,3,0	0/1:10,0:10:17.15:17,0,71	1/1:6,0:6:2.96:19,3,0	0/1:26,16:42:66.18:194,0,66	0/0:6,0:6:2.24:0,2,23	./.	0/1:13,9:22:49.40:122,0,49	1/1:7,0:7:2.96:19,3,0	1/1:3,0:6:5.79:37,6,0	0/1:10,7:17:14.37:57,0,14	1/1:5,0:5:2.98:21,3,0
chr10	47189145	.	AG	A	9499.99	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=16.082;DP=633;FS=2.082;HRun=2;HaplotypeScore=73.0559;InbreedingCoeff=0.9736;MQ=81.56;MQ0=0;MQRankSum=-6.659;QD=36.68;ReadPosRankSum=5.031;VQSLOD=5.3544;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,108,1597	0/0:7,0:7:21.07:0,21,313	0/0:24,0:23:69.22:0,69,980	0/0:19,0:19:47.18:0,47,621	0/0:11,0:11:30.10:0,30,449	0/0:20,0:20:57.19:0,57,853	0/0:31,0:31:93.30:0,93,1363	0/0:41,0:41:99:0,123,1808	1/1:0,30:30:87.28:1130,87,0	0/0:23,0:23:69.21:0,69,975	0/0:12,0:12:33.10:0,33,474	1/1:0,38:38:99:1480,114,0	1/1:0,28:28:72.23:934,72,0	0/0:23,0:23:69.22:0,69,1011	0/0:18,0:18:54.17:0,54,791	1/1:0,16:16:48.16:623,48,0	0/0:32,0:32:96.31:0,96,1420	0/0:29,0:29:87.21:0,87,1247	1/1:0,22:22:66.21:855,66,0	1/1:0,8:8:24.08:311,24,0	1/1:1,56:57:99:2103,163,0	1/1:0,17:17:48.16:623,48,0	1/1:0,3:3:3.01:39,3,0	1/1:0,19:19:54.18:701,54,0	0/0:14,0:14:42.14:0,42,627	0/0:25,0:25:69.21:0,69,973	1/1:1,20:21:54.18:701,54,0	0/0:8,0:8:24.08:0,24,360
chr10	47190964	.	TGG	T	4036.54	PASS	AB=0.909;AC=23;AF=0.411;AN=56;BaseQRankSum=2.403;DP=431;FS=0.000;HRun=11;HaplotypeScore=63.2148;InbreedingCoeff=0.9004;MQ=71.97;MQ0=2;MQRankSum=-2.222;QD=21.59;ReadPosRankSum=5.636;VQSLOD=2.6629;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:31:76.42:0,76,880	0/0:8,0:9:17.97:0,18,177	0/0:16,0:10:14.63:0,15,155	0/0:16,0:13:23.54:0,24,235	0/0:9,0:9:24.05:0,24,319	0/0:12,0:12:24.06:0,24,347	0/0:24,0:26:47.50:0,47,659	0/0:10,0:10:8.96:0,9,88	1/1:0,6:6:12.03:128,12,0	0/0:12,0:12:18.06:0,18,277	0/1:9,0:10:16.68:17,0,74	1/1:4,11:15:30.05:319,30,0	1/1:2,8:10:27.06:287,27,0	0/0:5,0:5:14.83:0,15,178	0/0:4,0:13:27.59:0,28,99	1/1:5,12:17:39.06:415,39,0	0/0:35,0:37:87.25:0,87,1052	0/0:8,0:11:25.25:0,25,208	1/1:8,8:17:35.53:335,36,0	1/1:5,9:14:20.98:222,21,0	1/1:4,18:22:45.08:479,45,0	1/1:5,12:17:33.06:347,33,0	1/1:9,14:23:50.90:532,51,0	1/1:3,14:16:39.09:415,39,0	0/0:16,0:17:26.51:0,27,277	0/0:13,0:14:17.55:0,18,239	1/1:3,16:19:51.13:542,51,0	0/0:6,0:6:12.04:0,12,185
chr10	47190974	.	GGT	G	1055.72	PASS	AB=0.922;AC=16;AF=0.286;AN=56;BaseQRankSum=12.254;DP=424;FS=6.527;HRun=0;HaplotypeScore=71.1433;InbreedingCoeff=0.2960;MQ=71.36;MQ0=2;MQRankSum=-2.512;QD=6.07;ReadPosRankSum=8.600;VQSLOD=1.1967;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:90.46:0,90,1041	0/0:10,0:10:24.33:0,24,251	0/0:16,0:10:20.47:0,20,202	0/0:18,0:15:32.84:0,33,354	0/0:11,0:11:32.85:0,33,372	0/0:15,0:15:38.97:0,39,432	0/0:23,0:23:63:0,63,837	0/0:11,0:11:23.94:0,24,249	0/1:7,0:7:12.20:29,0,12	0/0:11,0:11:33.08:0,33,404	0/1:5,2:7:18.10:18,0,120	1/1:11,1:12:25.88:135,26,0	0/1:11,0:11:19.28:82,0,19	0/0:8,0:8:12.71:0,13,244	0/0:13,0:13:10.45:0,10,125	0/1:16,1:17:55.35:95,0,55	0/0:37,0:37:72.72:0,73,1122	0/0:12,0:12:21.60:0,22,277	0/1:13,3:16:30.41:106,0,30	0/1:11,1:12:27.84:55,0,28	1/1:19,0:19:16.05:98,16,0	0/1:14,2:16:15.36:113,0,15	1/1:17,2:19:22.17:206,22,0	0/1:19,0:18:70.28:85,0,70	0/0:14,0:14:23.80:0,24,290	0/0:11,0:11:24.05:0,24,311	1/1:17,2:19:24.10:215,24,0	0/0:5,0:5:15.02:0,15,179
chr10	47191507	.	GC	G	4918.50	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=12.009;DP=758;FS=7.106;HRun=1;HaplotypeScore=72.8707;InbreedingCoeff=0.9988;MQ=96.63;MQ0=0;MQRankSum=-5.363;QD=39.35;ReadPosRankSum=0.555;VQSLOD=5.3068;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,160,2538	0/0:12,0:12:36.12:0,36,576	0/0:39,0:39:61.86:0,62,1455	0/0:36,0:35:86.36:0,86,1417	0/0:22,0:22:66.21:0,66,1031	0/0:19,0:19:57.19:0,57,911	0/0:26,0:26:78.24:0,78,1214	0/0:30,0:29:90.31:0,90,1439	0/0:21,0:21:63.21:0,63,1007	0/0:27,0:27:81.28:0,81,1295	0/0:14,0:14:42.13:0,42,647	0/0:34,0:34:99:0,102,1604	0/0:34,0:34:99:0,102,1629	0/0:34,0:34:99:0,99,1560	0/0:44,0:44:99:0,129,2015	0/0:29,0:29:87.26:0,87,1342	0/0:27,0:26:78.23:0,78,1220	0/0:19,0:19:57.19:0,57,911	1/1:0,18:18:54.15:734,54,0	1/1:0,19:19:54.18:755,54,0	1/1:1,54:55:99:2130,154,0	0/0:14,0:14:39.13:0,39,619	0/0:15,0:15:45.15:0,45,720	0/0:27,0:27:81.28:0,81,1289	0/0:26,0:26:75.24:0,75,1176	0/0:23,0:23:69.24:0,69,1102	1/1:0,33:33:93.31:1299,93,0	0/0:7,0:7:21.07:0,21,336
chr10	47192344	.	T	TTCTTCATCA	2326.19	PASS	AB=1.000;AC=29;AF=0.537;AN=54;BaseQRankSum=-4.935;DP=392;FS=33.265;HRun=0;HaplotypeScore=181.4662;InbreedingCoeff=0.6286;MQ=28.93;MQ0=47;MQRankSum=1.729;QD=9.42;ReadPosRankSum=-0.223;VQSLOD=1.4124;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:9:8.84:0,9,77	1/1:6,0:5:2.96:19,3,0	1/1:22,0:1:0.89:2,1,0	./.	1/1:14,0:14:6.01:79,6,0	0/0:16,0:13:7.93:0,8,60	0/0:14,0:12:7:0,7,52	1/1:12,0:8:8.88:59,9,0	0/0:15,0:13:11.53:0,12,87	1/1:14,0:13:18.06:337,18,0	1/1:12,0:12:17.48:276,17,0	0/0:10,0:8:14.57:0,15,109	0/0:13,0:8:11.66:0,12,99	1/1:17,0:15:21.07:452,21,0	1/1:24,0:24:25.20:265,25,0	0/0:17,0:17:19.92:0,20,102	1/1:14,0:11:5.93:91,6,0	1/1:10,0:8:7.27:143,7,0	0/0:11,0:11:3.16:0,3,155	0/1:15,0:14:0:0,0,0	0/1:7,0:5:0:0,0,0	0/0:13,0:10:4.12:0,4,18	0/0:11,0:9:5.24:0,5,18	0/1:28,0:23:7.07:7,0,107	1/1:17,0:15:20.55:288,21,0	1/1:20,0:18:18.52:407,19,0	0/0:3,0:1:3.01:0,3,40	1/1:10,3:7:3.01:80,3,0
chr10	47192347	.	TTCA	T	1438.56	PASS	AB=1.000;AC=29;AF=0.558;AN=52;BaseQRankSum=0.940;DP=385;FS=18.552;HRun=0;HaplotypeScore=147.3734;InbreedingCoeff=0.7481;MQ=29.76;MQ0=37;MQRankSum=-2.218;QD=7.65;ReadPosRankSum=-0.566;VQSLOD=1.7765;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,2:7:6.01:64,6,0	0/0:5,0:5:2.97:0,3,20	./.	./.	0/0:14,0:14:2.99:0,3,25	1/1:10,5:12:11.97:136,12,0	1/1:12,2:13:14.86:130,15,0	0/0:10,0:7:11.70:0,12,70	1/1:11,3:12:9:118,9,0	0/0:13,0:13:20.84:0,21,181	0/0:13,0:13:16.66:0,17,130	1/1:5,5:8:15.05:197,15,0	1/1:8,4:8:12.04:153,12,0	0/0:17,0:15:20.60:0,21,127	0/0:24,0:24:23.61:0,24,149	1/1:10,7:17:21.07:276,21,0	0/0:14,0:12:11.92:0,12,107	0/1:12,0:10:0:0,0,0	1/1:11,0:12:15.94:106,16,0	1/1:6,0:13:2.90:16,3,0	1/1:7,0:5:0.89:2,1,0	1/1:3,8:10:6.02:76,6,0	1/1:6,4:9:9.03:113,9,0	1/1:16,13:24:15.05:197,15,0	0/0:18,0:16:17.90:0,18,160	0/0:21,0:19:30.99:0,31,217	1/1:3,0:2:5.93:40,6,0	0/0:12,0:7:2.80:0,3,13
chr10	47192558	.	A	AT	2874.37	PASS	AB=0.958;AC=32;AF=0.615;AN=52;BaseQRankSum=5.792;DP=391;FS=8.724;HRun=9;HaplotypeScore=70.1942;InbreedingCoeff=0.6090;MQ=68.12;MQ0=0;MQRankSum=-2.229;QD=11.68;ReadPosRankSum=0.405;VQSLOD=2.4365;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,105,902	0/1:2,1:3:5.89:27,0,6	0/0:21,0:13:20.02:0,20,165	0/0:15,0:13:1.92:0,2,135	1/1:3,9:12:30.05:318,30,0	0/0:19,0:18:41.96:0,42,361	0/0:26,0:26:62.98:0,63,547	1/1:13,19:31:23.04:552,23,0	1/1:10,0:10:2.22:7,2,0	1/1:2,10:11:24.06:264,24,0	1/1:5,5:10:12.26:207,12,0	0/0:9,0:9:2.67:0,3,11	0/1:10,0:10:0:0,0,0	1/1:4,7:11:24.03:252,24,0	1/1:7,6:12:8.54:98,9,0	0/1:11,0:11:0:0,0,0	1/1:6,13:20:35.10:393,35,0	1/1:7,7:14:23.54:232,24,0	./.	1/1:11,0:11:1.55:4,2,0	0/1:15,0:15:0:0,0,0	./.	0/1:9,0:11:0:0,0,0	0/1:16,0:16:0:0,0,0	1/1:4,5:9:21.04:218,21,0	1/1:8,13:21:2.07:324,2,0	0/0:5,0:5:2.67:0,3,11	1/1:1,4:5:12.03:132,12,0
chr10	47192562	.	T	TA	400.27	PASS	AB=1.000;AC=21;AF=0.438;AN=48;BaseQRankSum=7.927;DP=304;FS=23.336;HRun=0;HaplotypeScore=63.0813;InbreedingCoeff=0.0538;MQ=74.34;MQ0=0;MQRankSum=-0.687;QD=2.44;ReadPosRankSum=4.110;VQSLOD=0.8995;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,126,1630	0/0:3,0:3:2:0,2,58	0/0:20,0:10:26.46:0,26,303	0/0:18,0:14:20.21:0,20,259	0/1:13,0:13:6.20:54,0,6	0/0:18,0:17:51.09:0,51,653	0/0:26,0:26:69.17:0,69,924	0/1:31,0:30:25.89:26,0,223	1/1:0,1:1:2.37:8,2,0	0/1:12,0:11:31.51:40,0,32	0/1:10,0:10:25.95:26,0,49	0/0:1,0:1:1.82:0,2,5	1/1:1,0:1:2.98:22,3,0	0/1:12,0:12:18.47:46,0,18	0/1:13,0:12:9.04:9,0,85	1/1:2,0:2:5.98:47,6,0	0/1:20,0:20:63.66:73,0,64	0/1:14,0:14:21.10:21,0,87	./.	1/1:3,0:3:6.46:51,6,0	./.	0/0:1,0:1:0:0,0,0	./.	./.	1/1:8,0:8:9.90:40,10,0	0/1:20,0:19:44.06:44,0,142	0/0:1,0:1:1.55:0,2,4	1/1:4,0:4:10.20:41,10,0
chr10	47192588	.	T	TC	1869.56	PASS	AB=0.890;AC=28;AF=0.824;AN=34;BaseQRankSum=-1.853;DP=231;FS=21.730;HRun=0;HaplotypeScore=60.2861;InbreedingCoeff=0.2761;MQ=63.41;MQ0=9;MQRankSum=-0.605;QD=9.16;ReadPosRankSum=-1.815;VQSLOD=1.1580;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:36,0:37:25.76:209,26,0	1/1:0,6:6:11.87:109,12,0	0/0:14,0:7:8.67:0,9,38	0/0:7,0:5:1.23:0,1,11	1/1:3,6:9:8.48:45,8,0	0/1:11,1:11:39.35:39,0,47	1/1:24,0:22:21.61:132,22,0	1/1:14,5:15:27.71:249,28,0	./.	1/1:9,1:10:10.56:142,11,0	1/1:3,4:7:5.95:45,6,0	./.	./.	1/1:3,13:17:8.84:72,9,0	1/1:3,7:9:3.01:36,3,0	./.	1/1:7,9:16:41.20:409,41,0	0/1:10,2:12:11.30:140,0,11	./.	./.	./.	./.	./.	./.	1/1:0,7:7:3.01:37,3,0	1/1:9,7:15:22.60:243,23,0	./.	1/1:0,2:2:6.02:73,6,0
chr10	47194166	.	GTTGTTTTTGTTT	G	9846.82	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=14.410;DP=673;FS=0.000;HRun=0;HaplotypeScore=211.1060;InbreedingCoeff=0.9753;MQ=60.48;MQ0=4;MQRankSum=-10.363;QD=36.07;ReadPosRankSum=5.451;VQSLOD=4.1472;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:60.20:0,60,2711	0/0:9,0:9:18.06:0,18,935	0/0:26,0:16:23.37:0,23,542	0/0:22,0:14:6.05:0,6,284	0/0:28,0:28:75.25:0,75,3144	0/0:31,0:31:84.29:0,84,3721	0/0:20,0:20:42.14:0,42,1558	0/0:29,0:29:66.20:0,66,1758	1/1:6,23:29:30.10:1050,30,0	0/0:28,0:28:78.26:0,78,3485	0/0:24,0:24:63.22:0,63,2999	1/1:2,19:21:21.07:743,21,0	1/1:6,20:26:21.07:729,21,0	0/0:21,0:21:48.16:0,48,2171	0/0:32,0:32:75.22:0,75,2770	1/1:3,25:28:38.62:1316,39,0	0/0:31,0:32:90.25:0,90,3592	0/0:26,0:26:69.23:0,69,2804	1/1:13,9:22:26.10:423,26,0	1/1:4,24:28:59.99:1529,60,0	1/1:18,0:17:17.97:236,18,0	1/1:3,22:25:54.05:1521,54,0	1/1:5,21:26:29.40:923,29,0	1/1:2,14:16:11.97:314,12,0	0/0:18,0:18:48.16:0,48,2317	0/0:24,0:24:60.18:0,60,2439	1/1:7,27:34:30.10:1062,30,0	0/0:6,0:6:18.06:0,18,1068
chr10	47196067	.	GTTTT	G	3810.64	PASS	AB=0.600;AC=23;AF=0.411;AN=56;BaseQRankSum=-0.695;DP=509;FS=3.203;HRun=18;HaplotypeScore=105.6010;InbreedingCoeff=0.9131;MQ=75.78;MQ0=3;MQRankSum=-3.450;QD=20.60;ReadPosRankSum=5.480;VQSLOD=1.9327;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:26:44.89:0,45,608	0/0:4,0:8:14.53:0,15,171	0/0:31,0:17:33.57:0,34,453	0/0:19,0:11:9.13:0,9,65	0/0:10,0:16:33.49:0,33,417	0/0:13,0:23:54.09:0,54,768	0/0:7,0:18:41.87:0,42,482	0/0:15,0:25:42.51:0,43,591	1/1:4,5:9:14.60:182,15,0	0/0:7,0:13:35.95:0,36,448	0/1:4,1:12:9.41:9,0,293	1/1:6,13:20:30.87:368,31,0	1/1:6,12:19:26.56:315,27,0	0/0:9,0:17:39.04:0,39,587	0/0:4,0:12:23.91:0,24,255	1/1:3,11:14:32.86:402,33,0	0/0:11,0:24:44.85:0,45,533	0/0:18,0:23:49.76:0,50,684	1/1:7,11:18:32.57:398,33,0	1/1:3,9:14:26.57:307,27,0	1/1:5,4:9:11.83:146,12,0	1/1:5,13:19:36.93:441,37,0	1/1:2,6:8:15.86:183,16,0	1/1:8,14:23:27.10:515,27,0	0/0:10,0:21:27.41:0,27,320	0/0:14,0:30:68.20:0,68,900	1/1:1,18:20:44.98:545,45,0	0/0:8,0:16:35.95:0,36,494
chr10	47196685	.	TC	T	20540.92	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=8.975;DP=717;FS=0.346;HRun=2;HaplotypeScore=74.4339;InbreedingCoeff=0.9997;MQ=83.76;MQ0=0;MQRankSum=-6.155;QD=36.04;ReadPosRankSum=3.590;VQSLOD=5.4190;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,138,2067	1/1:0,14:14:39.13:506,39,0	0/0:32,0:32:93.30:0,93,1373	0/0:21,0:21:26.55:0,27,675	1/1:1,29:30:81.26:1052,81,0	0/0:23,0:23:66.22:0,66,986	0/0:25,0:25:72.24:0,72,1079	1/1:1,36:37:99:1400,108,0	1/1:0,21:21:60.20:779,60,0	1/1:0,18:18:54.18:698,54,0	1/1:0,21:21:60.20:779,60,0	1/1:0,21:21:57.19:739,57,0	1/1:0,35:35:99:1324,102,0	1/1:1,20:21:54.18:701,54,0	1/1:1,32:33:93.30:1208,93,0	1/1:2,24:26:63.20:818,63,0	1/1:0,29:29:84.27:1090,84,0	1/1:0,15:15:36.12:467,36,0	1/1:1,15:16:39.13:506,39,0	1/1:0,19:19:54.18:701,54,0	1/1:0,45:45:99:1636,126,0	1/1:0,26:26:72.23:935,72,0	1/1:1,21:22:57.18:740,57,0	1/1:0,25:25:72.23:935,72,0	1/1:1,24:25:72.23:935,72,0	1/1:1,26:27:75.23:959,75,0	1/1:0,30:30:87.28:1129,87,0	1/1:0,14:14:39.13:506,39,0
chr10	47197028	.	C	CT	4959.51	PASS	AB=0.817;AC=24;AF=0.429;AN=56;BaseQRankSum=-9.976;DP=566;FS=5.349;HRun=10;HaplotypeScore=62.1076;InbreedingCoeff=0.8201;MQ=65.70;MQ0=6;MQRankSum=2.087;QD=17.97;ReadPosRankSum=-2.399;VQSLOD=4.6726;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:49.19:0,49,479	1/1:1,4:5:12.03:128,12,0	0/0:25,0:9:1.59:0,2,80	0/1:17,0:12:10.82:11,0,35	1/1:6,20:27:1.91:429,2,0	0/0:14,0:14:32.94:0,33,271	0/0:18,0:18:38.94:0,39,320	1/1:8,24:33:47.89:690,48,0	0/0:21,0:21:56.71:0,57,456	1/1:4,16:20:45.11:477,45,0	1/1:2,12:15:38.89:382,39,0	0/0:18,0:18:38.94:0,39,320	0/0:21,1:22:28.27:0,28,436	1/1:4,22:26:48.12:506,48,0	1/1:5,25:30:42.09:440,42,0	0/0:20,0:20:56.92:0,57,468	1/1:4,26:30:63.15:666,63,0	1/1:2,15:16:27.07:288,27,0	0/0:17,0:17:35.94:0,36,295	0/0:18,0:18:38.87:0,39,317	0/0:20,0:20:22.90:0,23,344	0/0:14,0:14:35.94:0,36,295	0/0:18,0:18:33:0,33,331	0/0:13,0:14:7.62:0,8,224	0/1:8,11:19:0.57:199,0,1	1/1:5,18:23:48.08:488,48,0	0/0:23,0:23:50.89:0,51,418	1/1:0,12:12:24.06:256,24,0
chr10	47197342	.	GA	G	2478.79	PASS	AB=0.938;AC=26;AF=0.481;AN=54;BaseQRankSum=-4.608;DP=372;FS=7.053;HRun=11;HaplotypeScore=47.3314;InbreedingCoeff=0.7953;MQ=64.83;MQ0=22;MQRankSum=-0.430;QD=12.21;ReadPosRankSum=-0.069;VQSLOD=2.5722;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:27:68.93:0,69,690	1/1:0,2:2:5.99:49,6,0	0/1:23,0:10:8.02:8,0,82	0/0:20,0:9:15.74:0,16,118	1/1:5,7:12:19.78:152,20,0	0/0:24,0:23:57.13:0,57,597	0/0:10,0:9:21.05:0,21,222	1/1:3,25:23:68.91:565,69,0	0/0:6,0:6:14.40:0,14,79	1/1:2,7:8:20.97:172,21,0	1/1:0,12:14:37.02:282,37,0	0/0:9,0:9:23.16:0,23,132	0/0:17,0:15:16.19:0,16,167	1/1:3,7:10:14.98:123,15,0	1/1:4,9:10:23.88:188,24,0	0/0:6,0:5:11.30:0,11,56	1/1:8,20:28:43.96:350,44,0	1/1:4,15:19:29.96:246,30,0	0/0:10,1:10:1.49:0,1,98	0/0:12,0:9:25.64:0,26,140	0/0:10,0:10:29.21:0,29,183	0/0:5,0:5:14.09:0,14,69	0/0:8,0:8:22.93:0,23,126	./.	1/1:3,9:12:23.96:197,24,0	1/1:3,8:10:23.96:196,24,0	0/1:12,2:13:19.89:20,0,118	1/1:1,6:7:17.94:142,18,0
chr10	47197571	.	A	AT	4757.81	PASS	AB=0.962;AC=26;AF=0.464;AN=56;BaseQRankSum=-12.939;DP=487;FS=7.060;HRun=10;HaplotypeScore=48.1455;InbreedingCoeff=0.8889;MQ=69.41;MQ0=0;MQRankSum=-1.659;QD=21.24;ReadPosRankSum=0.978;VQSLOD=5.7007;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:95.87:0,96,785	1/1:0,3:3:9.02:96,9,0	0/0:12,0:10:5.26:0,5,111	0/1:11,0:10:0.13:0,0,81	1/1:3,13:16:39.10:416,39,0	0/0:20,0:20:50.93:0,51,419	0/0:16,0:16:32.95:0,33,271	1/1:3,11:14:33.07:345,33,0	0/0:25,0:25:68.88:0,69,560	1/1:2,14:17:45.11:474,45,0	1/1:1,13:14:35.97:347,36,0	0/0:26,0:26:65.89:0,66,542	0/0:18,0:18:44.92:0,45,366	1/1:2,16:18:24.06:256,24,0	1/1:0,16:16:39.10:416,39,0	0/0:13,0:13:35.95:0,36,296	1/1:6,26:32:66.02:703,66,0	1/1:5,8:13:21.05:224,21,0	0/0:18,1:19:12.93:0,13,308	0/1:11,1:12:1.94:2,0,191	0/0:11,0:11:23.95:0,24,197	0/0:6,0:6:17.98:0,18,148	0/0:15,0:15:44.94:0,45,366	0/0:22,0:22:56.93:0,57,468	1/1:0,22:22:54.14:576,54,0	1/1:5,19:24:35.51:583,36,0	0/0:26,0:25:62.92:0,63,517	1/1:0,12:12:30.08:320,30,0
chr10	47198880	.	G	GT	2083.36	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-10.415;DP=646;FS=2.285;HRun=6;HaplotypeScore=76.8491;InbreedingCoeff=0.9964;MQ=87.79;MQ0=0;MQRankSum=-3.311;QD=28.54;ReadPosRankSum=-0.220;VQSLOD=4.0996;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,27:32:69.22:868,69,0	0/0:8,0:8:21.05:0,21,214	0/0:27,0:26:68.94:0,69,652	0/0:24,0:24:22.33:0,22,528	0/0:31,0:31:84.15:0,84,841	1/1:1,16:17:45.14:566,45,0	1/1:3,21:24:63.20:792,63,0	0/0:19,0:19:45.07:0,45,440	0/0:29,0:29:84.19:0,84,857	0/0:25,0:25:63.13:0,63,637	0/0:22,0:22:60.13:0,60,611	0/0:17,0:17:36.05:0,36,360	0/0:19,0:19:57.13:0,57,581	0/0:21,0:21:60.13:0,60,610	0/0:23,0:23:66.13:0,66,666	0/0:29,0:29:87.19:0,87,882	0/0:42,0:42:99:0,123,1254	0/0:18,0:18:48.04:0,48,478	0/0:28,0:28:66.10:0,66,649	0/0:24,0:24:60.13:0,60,612	0/0:10,0:10:24.05:0,24,245	0/0:16,0:16:33.06:0,33,336	0/0:22,0:22:54.12:0,54,551	0/0:26,0:26:75.13:0,75,754	0/0:23,0:23:57.11:0,57,576	0/0:22,0:22:54.09:0,54,540	0/0:38,0:38:99:0,105,1060	0/0:10,0:10:30.07:0,30,306
chr10	47200727	.	C	CA	8860.83	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-13.808;DP=601;FS=9.923;HRun=3;HaplotypeScore=78.2479;InbreedingCoeff=0.9991;MQ=69.92;MQ0=0;MQRankSum=-0.387;QD=37.07;ReadPosRankSum=2.095;VQSLOD=4.9317;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:75.23:0,75,899	1/1:0,11:11:30.10:420,30,0	0/0:21,0:17:29.91:0,30,318	0/0:23,0:16:29.61:0,30,299	1/1:1,25:26:72.24:997,72,0	0/0:18,0:18:48.15:0,48,576	0/0:22,0:22:57.17:0,57,683	1/1:2,26:28:78.24:1055,78,0	0/0:20,0:20:51.16:0,51,611	1/1:1,28:29:84.27:1159,84,0	1/1:0,15:15:45.15:630,45,0	0/0:23,0:23:66.17:0,66,768	0/0:20,0:20:54.17:0,54,646	1/1:3,22:25:69.23:952,69,0	1/1:2,20:22:48.16:672,48,0	0/0:22,0:22:63.19:0,63,756	1/1:0,20:20:57.19:786,57,0	1/1:3,10:13:21.07:294,21,0	0/0:24,0:24:66.19:0,66,781	0/0:26,0:26:63.18:0,63,741	0/0:19,0:19:51.15:0,51,608	0/0:21,0:21:60.17:0,60,709	0/0:16,0:16:48.13:0,48,564	0/0:34,0:34:93.26:0,93,1099	1/1:1,12:13:30.10:420,30,0	1/1:1,26:27:45.27:1055,45,0	0/0:25,0:24:69.21:0,69,827	1/1:0,10:10:30.10:420,30,0
chr10	47200746	.	TTGTG	T	736.83	PASS	AB=0.860;AC=17;AF=0.340;AN=50;BaseQRankSum=1.857;DP=725;FS=8.180;HRun=0;HaplotypeScore=161.1918;InbreedingCoeff=0.5753;MQ=61.09;MQ0=14;MQRankSum=-1.640;QD=2.75;ReadPosRankSum=1.101;VQSLOD=2.1756;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:26.85:0,27,274	0/0:10,0:10:6.02:0,6,81	./.	./.	0/0:30,0:31:26.87:0,27,373	0/0:23,0:24:29.71:0,30,370	0/1:29,1:32:22.38:22,0,246	0/0:28,0:27:0:0,0,1	0/1:20,8:27:12.19:64,0,12	0/0:36,0:36:43.83:0,44,470	0/0:22,0:21:21.03:0,21,253	1/1:20,5:25:5.91:62,6,0	1/1:18,3:21:5.18:54,5,0	0/0:23,0:22:21.04:0,21,276	0/0:24,0:24:37.96:0,38,397	0/0:25,0:25:3.35:0,3,281	0/0:32,0:31:30.06:0,30,378	0/0:15,0:13:11.16:0,11,147	1/1:26,0:27:3:28,3,0	1/1:8,0:18:15.02:139,15,0	./.	1/1:22,0:21:7.82:74,8,0	0/1:18,2:19:6.02:40,0,6	1/1:30,9:41:11.65:309,12,0	0/0:22,0:22:23.84:0,24,285	0/0:34,0:33:33.03:0,33,420	1/1:19,0:31:11.88:112,12,0	0/0:11,0:11:9.03:0,9,144
chr10	47203103	.	A	AGT	932.87	PASS	AB=0.892;AC=16;AF=0.348;AN=46;BaseQRankSum=-5.491;DP=617;FS=0.000;HRun=0;HaplotypeScore=112.6960;InbreedingCoeff=-0.0309;MQ=55.91;MQ0=15;MQRankSum=3.559;QD=3.12;ReadPosRankSum=-0.488;VQSLOD=2.3041;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:32:13.28:13,0,19	0/0:6,0:8:2.84:0,3,14	./.	./.	./.	0/0:21,0:28:2.60:0,3,10	1/1:23,0:28:0.46:19,0,0	./.	0/1:13,6:20:51.41:114,0,51	0/1:19,0:19:0.02:1,0,0	./.	0/1:11,7:18:11.85:160,0,12	0/1:24,0:24:1.87:64,0,2	0/0:9,0:17:6.10:0,6,29	0/0:7,0:19:14.16:0,14,68	0/1:14,5:19:19.93:120,0,20	0/0:24,0:30:15.07:0,15,77	0/0:19,0:33:25.57:0,26,125	1/1:18,0:17:1.54:25,2,0	1/1:13,0:16:2.98:22,3,0	0/0:36,0:42:2.84:0,3,14	0/1:20,0:20:0:0,0,0	0/1:21,0:21:28.76:29,0,51	0/1:19,23:43:27.85:463,0,28	0/0:17,0:19:2.72:0,3,14	0/1:16,0:19:8.07:27,0,8	0/0:12,0:20:14.11:0,14,68	0/0:4,0:7:2.84:0,3,14
chr10	47203945	.	T	TA	4324.91	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-13.862;DP=736;FS=3.383;HRun=3;HaplotypeScore=81.3039;InbreedingCoeff=0.9983;MQ=89.07;MQ0=0;MQRankSum=-2.572;QD=39.32;ReadPosRankSum=0.875;VQSLOD=4.6937;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,70:71:99:2813,202,0	0/0:7,0:7:21.06:0,21,252	0/0:22,0:22:60.13:0,60,685	0/0:34,0:34:87.09:0,87,1004	0/0:17,0:17:42.13:0,42,504	1/1:0,20:20:54.18:756,54,0	1/1:0,19:19:54.18:756,54,0	0/0:29,0:29:84.25:0,84,998	0/0:37,0:37:99:0,102,1210	0/0:32,0:32:93.27:0,93,1104	0/0:10,0:10:30.07:0,30,337	0/0:34,0:34:99:0,99,1187	0/0:28,0:28:75.21:0,75,886	0/0:25,0:25:69.20:0,69,815	0/0:28,0:28:81.24:0,81,960	0/0:21,0:21:63.18:0,63,746	0/0:29,0:29:78.24:0,78,936	0/0:29,0:29:84.23:0,84,992	0/0:29,0:29:81.22:0,81,941	0/0:20,0:20:57.17:0,57,684	0/0:36,0:36:99:0,105,1246	0/0:20,0:20:48.15:0,48,576	0/0:21,0:21:63.19:0,63,756	0/0:35,0:34:99:0,99,1187	0/0:20,0:20:54.13:0,54,626	0/0:25,0:25:75.23:0,75,900	0/0:24,0:24:72.20:0,72,839	0/0:14,0:14:39.12:0,39,468
chr10	47212579	.	TTGTGTG	T	1061.87	PASS	AB=0.853;AC=28;AF=0.609;AN=46;BaseQRankSum=5.600;DP=608;FS=18.579;HRun=0;HaplotypeScore=124.1360;InbreedingCoeff=0.1498;MQ=59.98;MQ0=20;MQRankSum=-3.538;QD=2.49;ReadPosRankSum=-0.056;VQSLOD=1.2001;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:36.12:0,36,934	0/0:3,0:4:6.02:0,6,128	./.	./.	./.	0/1:18,3:21:13.69:14,0,17	0/1:27,0:31:0:0,0,0	0/0:18,0:17:7.52:0,8,64	1/1:14,0:21:9.03:126,9,0	0/1:12,3:14:8.93:133,0,9	0/0:12,0:12:0:0,0,0	1/1:28,0:30:9.03:125,9,0	1/1:10,0:16:6.02:84,6,0	1/1:33,0:32:3:60,3,0	0/0:21,0:21:33.07:0,33,631	0/1:21,0:24:1.92:2,0,125	0/1:25,5:30:17.40:129,0,17	0/1:13,1:14:70.89:71,0,74	./.	1/1:10,2:10:5.93:40,6,0	0/1:61,12:72:10.49:10,0,62	1/1:12,0:14:3.90:44,4,0	1/1:10,1:13:2.96:20,3,0	1/1:18,1:19:3.01:42,3,0	0/1:11,6:16:15.66:23,0,16	1/1:17,7:24:12:161,12,0	1/1:12,2:14:6.02:121,6,0	./.
chr10	47212623	.	GTGTGTA	G	321.07	PASS	AB=0.976;AC=11;AF=0.196;AN=56;BaseQRankSum=8.426;DP=455;FS=5.997;HRun=0;HaplotypeScore=98.3348;InbreedingCoeff=-0.2393;MQ=60.74;MQ0=14;MQRankSum=-4.455;QD=1.98;ReadPosRankSum=2.915;VQSLOD=0.9304;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:34:87.05:0,87,1516	0/0:6,0:6:10.70:0,11,198	0/0:15,0:10:11.17:0,11,221	0/1:22,0:15:4.60:5,0,288	0/0:7,0:7:14.64:0,15,107	0/0:16,0:16:15.96:0,16,201	0/0:25,0:25:51.42:0,51,443	0/0:19,0:18:51.04:0,51,492	0/1:12,0:12:40.69:55,0,41	0/1:11,0:11:64.25:64,0,170	0/1:11,0:9:8.92:9,0,125	0/1:16,0:16:68.98:69,0,200	0/1:15,0:15:17.33:17,0,119	0/1:7,4:11:41.17:41,0,131	0/0:20,0:20:51.02:0,51,834	0/0:17,1:18:2.37:0,2,225	0/1:24,0:24:22.22:22,0,331	0/1:19,0:19:88.28:88,0,272	0/0:11,0:9:27:0,27,240	0/0:7,0:6:12.44:0,12,105	0/0:48,0:47:69.65:0,70,638	0/0:15,0:15:20.31:0,20,295	0/0:12,0:11:22.02:0,22,164	0/0:18,0:18:19.73:0,20,290	0/0:14,0:14:19.86:0,20,145	0/1:17,0:17:18.16:18,0,342	0/1:4,0:4:11.08:75,0,11	0/0:7,0:4:11.97:0,12,96
chr10	47214943	.	AAAAAC	A	8282.79	PASS	AB=1.000;AC=20;AF=0.357;AN=56;BaseQRankSum=-9.157;DP=644;FS=3.909;HRun=0;HaplotypeScore=157.0353;InbreedingCoeff=0.6841;MQ=70.43;MQ0=6;MQRankSum=-6.712;QD=32.48;ReadPosRankSum=-1.554;VQSLOD=4.2394;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,104,3242	0/0:9,0:9:26.68:0,27,619	0/0:40,0:25:54.66:0,55,1312	0/0:36,0:25:14.33:0,14,782	1/1:2,24:26:69.07:1168,69,0	0/1:22,0:22:36.64:37,0,896	0/0:25,0:25:29.58:0,30,1155	0/0:24,0:24:25.47:0,25,904	0/0:19,0:19:45.14:0,45,893	1/1:3,31:34:93.30:1774,93,0	1/1:0,16:16:45.10:803,45,0	0/0:14,0:14:2.91:0,3,690	0/1:21,0:21:28.03:28,0,895	0/0:18,0:18:22.37:0,22,1016	0/0:33,0:31:57.59:0,58,1757	0/0:19,0:19:48.16:0,48,1003	1/1:1,17:18:42.09:827,42,0	1/1:1,19:20:54.14:1004,54,0	0/1:21,0:21:23.18:23,0,974	0/0:22,0:22:63.20:0,63,1257	0/0:14,0:14:42.14:0,42,879	0/1:23,0:23:2.62:3,0,1049	0/0:21,0:21:47.27:0,47,1076	0/0:25,0:25:22.25:0,22,1179	1/1:2,24:26:51.13:1013,51,0	1/1:0,23:23:66.18:1293,66,0	0/0:27,0:27:60.46:0,60,1529	1/1:0,5:5:15.05:310,15,0
chr10	47214948	.	C	CA	10007.36	PASS	AB=1.000;AC=41;AF=0.732;AN=56;BaseQRankSum=-14.277;DP=644;FS=3.798;HRun=7;HaplotypeScore=106.5644;InbreedingCoeff=0.4914;MQ=71.61;MQ0=6;MQRankSum=4.089;QD=19.90;ReadPosRankSum=-2.631;VQSLOD=3.3754;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:89.11:0,89,1012	1/1:10,0:10:26.32:156,26,0	0/0:43,0:28:37.27:0,37,420	0/0:32,0:23:5.91:0,6,238	0/1:26,0:26:5.04:102,0,5	1/1:2,20:22:54.17:652,54,0	1/1:3,22:25:57.17:689,57,0	1/1:22,0:22:55.25:323,55,0	1/1:3,16:20:38.99:449,39,0	0/1:31,0:31:9.24:152,0,9	1/1:16,0:16:2.58:94,3,0	1/1:3,12:15:30.04:346,30,0	1/1:1,19:20:54.16:644,54,0	1/1:3,16:19:45.07:521,45,0	1/1:31,0:29:70.19:415,70,0	1/1:0,22:22:48.15:580,48,0	0/0:17,0:17:11.52:0,12,27	0/1:21,0:21:8.81:77,0,9	1/1:0,22:22:66.19:785,66,0	1/1:1,19:20:57.12:671,57,0	1/1:0,16:16:42.13:507,42,0	1/1:6,17:23:54.15:633,54,0	1/1:1,19:20:54.17:652,54,0	1/1:2,23:25:63.19:761,63,0	0/1:25,0:25:8.53:9,0,15	0/1:24,0:24:16.67:47,0,17	1/1:6,22:28:63.13:743,63,0	0/0:5,0:5:1.50:0,1,5
chr10	47214955	.	A	AAC	3058.56	PASS	AB=1.000;AC=18;AF=0.321;AN=56;BaseQRankSum=-10.338;DP=662;FS=11.186;HRun=0;HaplotypeScore=146.5771;InbreedingCoeff=0.2694;MQ=74.44;MQ0=6;MQRankSum=2.688;QD=11.67;ReadPosRankSum=-0.201;VQSLOD=3.0385;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,122,1693	1/1:1,9:10:27.09:520,27,0	0/0:41,0:27:56.41:0,56,768	0/0:35,0:25:32.17:0,32,485	0/0:27,0:28:58.65:0,59,564	1/1:20,0:20:0.94:8,1,0	0/0:25,0:25:1.87:0,2,67	1/1:3,22:25:68.93:1128,69,0	0/1:19,0:19:18.96:23,0,19	0/0:31,0:31:76.77:0,77,789	0/0:18,0:18:41.59:0,42,398	0/1:13,0:13:17.42:17,0,18	0/1:20,0:20:3.43:3,0,4	1/1:16,0:16:1.44:20,1,0	1/1:0,31:29:72.25:1388,72,0	0/0:26,0:26:4.76:0,5,92	0/0:19,0:19:48.08:0,48,504	0/0:26,0:26:61.50:0,62,594	0/1:25,0:25:38.54:89,0,39	0/1:24,0:24:7.76:8,0,101	0/1:18,0:18:9.16:9,0,43	0/1:20,0:20:5.73:6,0,32	0/1:21,0:21:3.27:3,0,14	0/0:27,0:27:1.96:0,2,65	0/0:25,0:25:50.79:0,51,526	0/0:25,0:25:69.49:0,69,692	0/0:24,0:25:4.87:0,5,83	0/0:7,0:7:21.01:0,21,201
chr10	47216573	.	G	GGTGT	6062.78	PASS	AB=0.800;AC=14;AF=0.250;AN=56;BaseQRankSum=-3.103;DP=714;FS=2.758;HRun=0;HaplotypeScore=124.1704;InbreedingCoeff=0.8091;MQ=64.64;MQ0=1;MQRankSum=0.964;QD=26.25;ReadPosRankSum=1.061;VQSLOD=4.9555;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:75.23:0,75,1240	0/0:16,0:16:45.15:0,45,763	0/1:21,0:20:14.11:14,0,476	0/0:20,0:18:20.92:0,21,330	0/0:25,0:25:63.20:0,63,1042	1/1:8,0:25:39.12:175,39,0	1/1:8,0:36:58.65:262,59,0	0/0:28,0:28:50.97:0,51,735	0/0:29,0:29:69.24:0,69,1171	0/0:34,0:34:75.26:0,75,1261	0/0:13,0:13:36.12:0,36,611	0/0:29,0:30:75.24:0,75,1223	0/0:29,0:29:78.23:0,78,1286	1/1:4,20:26:56.79:1360,57,0	0/0:28,0:29:69.23:0,69,1148	0/0:22,0:22:60.19:0,60,993	0/0:34,0:34:93.32:0,93,1577	0/0:33,0:33:69.23:0,69,1139	1/1:13,6:22:29.74:519,30,0	0/1:4,8:12:26.70:496,0,27	1/1:20,38:64:89.67:2037,90,0	0/0:10,0:10:24.08:0,24,404	0/0:9,0:9:15.05:0,15,254	0/0:36,0:36:87.30:0,87,1476	0/0:20,0:19:42.12:0,42,685	0/0:23,0:24:66.22:0,66,1097	1/1:6,18:24:48.64:1199,49,0	0/0:13,0:14:32.91:0,33,537
chr10	47217003	.	T	TGA	1104.62	PASS	AB=0.904;AC=26;AF=0.464;AN=56;BaseQRankSum=9.656;DP=751;FS=0.520;HRun=0;HaplotypeScore=171.6412;InbreedingCoeff=0.4672;MQ=75.64;MQ0=7;MQRankSum=-2.161;QD=3.12;ReadPosRankSum=-3.306;VQSLOD=2.2288;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,114,1417	0/1:14,0:14:12.82:25,0,13	0/0:51,0:36:44.95:0,45,576	0/0:60,0:36:36.67:0,37,418	0/0:20,0:20:42.12:0,42,530	1/1:27,0:27:9.77:76,10,0	1/1:34,0:31:10.89:101,11,0	1/1:23,0:23:2.41:52,2,0	1/1:9,1:15:8.43:66,8,0	0/0:42,0:42:99:0,108,1337	0/0:12,0:12:27.08:0,27,331	1/1:25,2:28:11.37:143,11,0	1/1:28,1:28:22.48:232,22,0	1/1:33,0:33:3.60:76,4,0	0/0:15,0:15:8.39:0,8,39	0/1:15,2:18:7.52:173,0,8	0/0:42,0:42:99:0,102,1258	0/0:39,0:39:96.25:0,96,1178	0/1:21,0:19:15.21:37,0,15	1/1:8,0:8:2.80:45,3,0	0/1:29,0:29:2.24:54,0,2	0/1:5,6:12:15.98:81,0,16	1/1:11,1:13:8.36:69,8,0	0/1:28,0:30:24.12:24,0,24	0/0:30,0:30:81.24:0,81,1009	0/0:30,0:30:81.19:0,81,1000	1/1:18,0:18:2.40:41,2,0	0/0:15,0:15:42.13:0,42,533
chr10	47217013	.	AGC	A	3016.28	PASS	AB=0.997;AC=30;AF=0.536;AN=56;BaseQRankSum=9.235;DP=724;FS=4.768;HRun=0;HaplotypeScore=149.6516;InbreedingCoeff=0.6036;MQ=70.82;MQ0=13;MQRankSum=-3.441;QD=7.32;ReadPosRankSum=-6.400;VQSLOD=1.4252;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,129,2029	1/1:10,3:13:27.22:212,27,0	0/0:48,0:29:29.49:0,29,651	0/1:63,0:31:0.47:0,0,408	0/0:18,0:18:44.97:0,45,639	1/1:22,2:24:25.96:235,26,0	1/1:31,2:30:45.18:348,45,0	1/1:25,2:26:66.80:582,67,0	0/1:13,0:12:26.67:31,0,27	0/0:41,0:41:71.41:0,71,1630	0/0:9,0:9:27.08:0,27,474	1/1:25,0:25:12.88:160,13,0	0/1:27,0:26:0.68:227,0,1	1/1:33,0:32:12.78:227,13,0	1/1:2,12:13:11.86:108,12,0	0/1:14,0:14:17.16:112,0,17	0/0:41,0:41:99:0,117,1752	0/0:37,0:37:59.19:0,59,1419	1/1:17,0:14:2.95:180,3,0	1/1:10,0:9:10.19:70,10,0	1/1:29,0:29:6.77:104,7,0	0/1:13,0:13:14.56:55,0,15	1/1:11,0:11:14.42:111,14,0	0/1:29,0:29:3.94:235,0,4	0/0:30,0:30:86.32:0,86,1260	0/0:30,0:30:79.61:0,80,1249	1/1:15,0:15:20.48:222,20,0	0/0:14,0:14:42.09:0,42,730
chr10	47217015	.	CGA	C	36.79	PASS	AB=0.955;AC=5;AF=0.089;AN=56;BaseQRankSum=4.987;DP=739;FS=0.000;HRun=0;HaplotypeScore=164.0659;InbreedingCoeff=0.2510;MQ=69.15;MQ0=14;MQRankSum=-0.859;QD=0.38;ReadPosRankSum=1.006;VQSLOD=1.9721;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,113,1699	0/1:13,0:13:15.51:16,0,19	0/0:49,0:28:37.86:0,38,426	0/0:65,0:31:15.82:0,16,304	0/0:18,0:18:33.09:0,33,488	0/0:24,0:24:2.99:0,3,44	0/0:32,0:29:4:0,4,34	0/1:29,0:28:4.26:4,0,14	0/0:13,0:12:8.48:0,8,99	0/0:38,2:40:15.48:0,15,1272	0/0:8,0:8:24.06:0,24,358	0/0:25,0:25:18.86:0,19,160	0/0:27,0:26:12.04:0,12,205	0/0:33,0:32:14.56:0,15,116	1/1:15,0:15:11.26:54,11,0	0/0:16,0:16:23.95:0,24,241	0/0:42,0:42:99:0,107,1456	0/1:32,5:38:73.08:73,0,1119	0/0:20,0:17:15.10:0,15,131	0/0:11,0:10:3.45:0,3,22	0/0:32,0:32:14.44:0,14,136	0/0:14,0:14:16.28:0,16,139	0/0:10,0:10:0.85:0,1,2	0/0:30,0:30:12.48:0,12,140	0/0:29,0:29:63.33:0,63,937	0/0:30,0:30:29.44:0,29,933	0/0:15,0:15:6.07:0,6,50	0/0:14,0:14:38.70:0,39,572
chr10	47217031	.	CGA	C	382.24	PASS	AB=0.950;AC=11;AF=0.196;AN=56;BaseQRankSum=4.364;DP=737;FS=7.791;HRun=0;HaplotypeScore=164.0684;InbreedingCoeff=0.6243;MQ=66.16;MQ0=16;MQRankSum=-0.441;QD=2.83;ReadPosRankSum=-0.392;VQSLOD=2.2015;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,1:37:49.84:0,50,1318	1/1:10,0:10:5.57:26,6,0	0/0:50,0:22:21.95:0,22,274	0/0:82,0:38:59.85:0,60,669	0/0:15,0:15:24.08:0,24,387	1/1:22,1:23:15.92:153,16,0	1/1:33,2:32:29.47:282,29,0	0/0:34,0:33:5.99:0,6,90	0/0:12,0:11:11.99:0,12,117	0/0:33,0:33:69.99:0,70,1116	0/0:7,0:7:12.04:0,12,198	0/0:25,0:25:20.92:0,21,162	0/0:29,0:28:25.27:0,25,248	0/0:35,0:34:12.98:0,13,107	1/1:20,0:19:9.63:51,10,0	0/0:16,0:16:22.41:0,22,238	0/0:37,2:39:24.32:0,24,1332	0/0:38,1:39:38.50:0,38,1299	0/0:18,0:15:12.90:0,13,133	0/0:14,0:13:6.40:0,6,49	0/0:38,0:38:15.29:0,15,127	0/0:13,0:13:16.73:0,17,127	0/1:10,0:10:0.03:0,0,1	0/0:24,0:24:8.03:0,8,114	0/1:23,2:25:17.75:18,0,734	0/0:28,0:28:60.74:0,61,951	0/0:14,0:14:7.10:0,7,52	0/1:11,1:12:4.49:4,0,334
chr10	47217402	.	TG	T	3951.59	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=7.076;DP=677;FS=1.705;HRun=4;HaplotypeScore=72.3595;InbreedingCoeff=0.9916;MQ=82.73;MQ0=0;MQRankSum=-1.501;QD=32.13;ReadPosRankSum=-2.172;VQSLOD=3.3652;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,153,2096	1/1:1,10:11:27.08:321,27,0	0/0:19,0:19:48.10:0,48,632	0/0:21,0:21:39.07:0,39,588	0/0:16,0:16:42.14:0,42,587	1/1:0,20:20:54.17:648,54,0	1/1:4,32:36:90.28:1080,90,0	1/1:2,30:32:90.27:1075,90,0	0/0:19,0:19:54.17:0,54,737	0/0:29,0:29:75.23:0,75,1017	0/0:15,0:15:42.14:0,42,587	0/0:41,0:41:99:0,117,1602	0/0:25,0:25:69.22:0,69,939	0/0:27,0:27:72.22:0,72,989	1/1:0,24:24:69.21:828,69,0	0/0:19,0:19:54.18:0,54,756	0/0:32,0:32:96.29:0,96,1309	0/0:30,0:30:81.27:0,81,1134	0/0:21,0:21:57.16:0,57,749	0/0:13,0:13:39.12:0,39,528	0/0:51,0:51:99:0,138,1893	0/0:9,0:9:24.08:0,24,335	0/0:8,0:8:24.08:0,24,333	0/0:44,0:44:99:0,123,1696	0/0:21,0:21:63.20:0,63,865	0/0:24,0:24:66.22:0,66,923	0/0:14,0:14:36.12:0,36,499	0/0:4,0:4:12.04:0,12,167
chr10	47217489	.	C	CAG	6154	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=4.151;DP=568;FS=1.728;HRun=0;HaplotypeScore=80.3129;InbreedingCoeff=0.9809;MQ=82.93;MQ0=0;MQRankSum=-2.074;QD=49.63;ReadPosRankSum=-0.392;VQSLOD=5.1811;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,108,1587	0/0:9,0:9:21.05:0,21,288	0/0:15,0:15:45.10:0,45,608	0/0:18,0:18:46.77:0,47,612	0/0:14,0:14:36.12:0,36,529	0/0:17,0:17:22.24:0,22,252	0/0:23,0:23:63.96:0,64,390	0/0:27,0:27:81.25:0,81,1142	0/0:18,0:18:51.16:0,51,731	0/0:11,0:11:30.10:0,30,442	0/0:10,0:10:30.10:0,30,441	0/0:32,0:32:96.25:0,96,1349	0/0:24,0:24:72.23:0,72,1040	1/1:0,24:24:66.23:1234,66,0	0/0:32,0:32:90.27:0,90,1284	0/0:16,0:16:48.16:0,48,706	0/0:19,0:19:54.09:0,54,744	0/0:18,0:18:51.17:0,51,750	1/1:1,17:19:57.15:946,57,0	1/1:0,7:7:15.05:281,15,0	1/1:1,46:48:99:2517,135,0	0/0:18,0:18:54.17:0,54,775	0/0:11,0:11:33.10:0,33,465	0/0:34,0:34:99:0,99,1428	0/0:23,0:23:66.22:0,66,969	0/0:16,0:16:48.14:0,48,672	1/1:0,26:26:63.22:1176,63,0	0/0:3,0:3:9.03:0,9,132
chr10	47218169	.	GCTGCTGGCTTGGTCTGGTAAGGCC	G	4766.64	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.330;DP=635;FS=3.747;HRun=0;HaplotypeScore=384.0910;InbreedingCoeff=0.9985;MQ=82.48;MQ0=0;MQRankSum=-7.757;QD=122.22;ReadPosRankSum=3.182;VQSLOD=3.9041;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,114,10421	0/0:13,0:13:36.12:0,36,3657	0/0:23,0:23:59.52:0,60,3081	0/0:15,0:15:41.96:0,42,2635	0/0:18,0:18:54.19:0,54,4451	1/1:1,18:19:48.16:3182,48,0	1/1:7,13:20:24.08:1585,24,0	0/0:29,0:29:87.23:0,87,6108	0/0:20,0:20:60.19:0,60,5222	0/0:25,0:25:75.24:0,75,5888	0/0:13,0:13:36.12:0,36,3214	0/0:27,0:27:81.28:0,81,8473	0/0:18,0:18:54.17:0,54,5149	0/0:35,0:35:99:0,102,10328	0/0:27,0:27:81.26:0,81,8223	0/0:14,0:14:42.14:0,42,4347	0/0:27,0:27:81.28:0,81,8902	0/0:20,0:20:60.16:0,60,5314	0/0:25,0:25:75.21:0,75,5775	0/0:19,0:19:57.20:0,57,5563	0/0:49,0:49:99:0,147,13008	0/0:21,0:21:57.18:0,57,3714	0/0:18,0:18:54.14:0,54,4157	0/0:23,0:23:69.22:0,69,7119	0/0:22,0:21:66.22:0,66,5710	0/0:21,0:21:63.19:0,63,5290	0/0:26,0:26:75.26:0,75,7931	0/0:10,0:10:30.10:0,30,3263
chr10	47218822	.	TAGAC	T	2347.43	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.698;DP=789;FS=8.478;HRun=0;HaplotypeScore=124.3455;InbreedingCoeff=0.9979;MQ=83.06;MQ0=0;MQRankSum=-3.224;QD=53.35;ReadPosRankSum=-0.859;VQSLOD=4.4262;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,151,4159	0/0:13,0:13:39.13:0,39,1112	0/0:23,0:23:69.22:0,69,1864	0/0:28,0:28:81.06:0,81,2051	0/0:24,0:24:72.23:0,72,2015	1/1:0,21:21:60.21:1257,60,0	1/1:0,23:23:60.14:1212,60,0	0/0:36,0:36:99:0,99,2504	0/0:32,0:32:96.33:0,96,2740	0/0:31,0:31:93.29:0,93,2616	0/0:23,0:23:69.22:0,69,1893	0/0:33,0:33:99:0,99,2791	0/0:41,0:41:99:0,123,3440	0/0:27,0:27:81.25:0,81,2277	0/0:36,0:36:99:0,108,2942	0/0:25,0:25:75.24:0,75,2092	0/0:34,0:34:99:0,102,2803	0/0:7,0:7:21.06:0,21,546	0/0:36,0:36:99:0,105,2781	0/0:28,0:28:84.27:0,84,2358	0/0:33,0:33:93.32:0,93,2689	0/0:21,0:21:63.19:0,63,1682	0/0:25,0:25:75.23:0,75,2009	0/0:45,0:45:99:0,135,3739	0/0:23,0:23:69.21:0,69,1913	0/0:30,0:30:90.31:0,90,2606	0/0:26,0:26:78.27:0,78,2173	0/0:14,0:14:42.13:0,42,1111
chr10	47219242	.	AG	A	3604.92	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=8.813;DP=539;FS=1.403;HRun=1;HaplotypeScore=51.4251;InbreedingCoeff=0.9951;MQ=89.64;MQ0=0;MQRankSum=-1.454;QD=37.16;ReadPosRankSum=1.425;VQSLOD=3.8693;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,114,1769	0/0:18,0:18:54.18:0,54,858	0/0:23,0:23:69.20:0,69,1060	0/0:26,0:26:63.21:0,63,975	0/0:21,0:21:60.18:0,60,925	0/0:19,0:19:57.19:0,57,903	0/0:18,0:18:51.17:0,51,815	0/0:22,0:22:66.23:0,66,1056	0/0:23,0:23:66.23:0,66,1054	0/0:19,0:19:57.19:0,57,912	0/0:12,0:12:36.12:0,36,576	0/0:19,0:19:57.18:0,57,887	0/0:10,0:10:30.10:0,30,479	1/1:0,17:17:45.15:629,45,0	0/0:22,0:22:66.23:0,66,1054	0/0:27,0:27:81.28:0,81,1289	0/0:16,0:16:48.16:0,48,767	0/0:18,0:18:54.16:0,54,838	1/1:0,13:13:36.12:503,36,0	1/1:0,10:10:18.06:252,18,0	1/1:0,38:38:99:1508,108,0	0/0:15,0:15:42.12:0,42,638	0/0:16,0:16:48.16:0,48,760	0/0:25,0:25:75.24:0,75,1176	0/0:7,0:7:18.06:0,18,288	0/0:19,0:19:57.19:0,57,910	1/1:0,19:19:51.17:713,51,0	0/0:8,0:8:21.07:0,21,336
chr10	47219381	.	TTGTG	T	1741.91	PASS	AB=0.793;AC=26;AF=0.481;AN=54;BaseQRankSum=6.046;DP=538;FS=8.587;HRun=0;HaplotypeScore=96.0419;InbreedingCoeff=0.5575;MQ=57.21;MQ0=13;MQRankSum=-3.154;QD=6.24;ReadPosRankSum=0.013;VQSLOD=1.3136;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:22:3.32:0,3,50	0/0:8,0:8:11.86:0,12,171	0/0:11,0:3:0:0,0,0	./.	0/1:18,4:21:6.95:108,0,7	0/0:15,0:19:7.78:0,8,69	0/0:16,0:19:2.74:0,3,12	0/0:29,0:27:8.35:0,8,65	1/1:4,0:12:9.28:132,9,0	0/1:23,4:26:5.08:57,0,5	0/1:8,4:12:14.95:40,0,15	1/1:9,0:25:27.19:275,27,0	1/1:5,0:7:6.01:56,6,0	0/0:15,0:26:8.98:0,9,98	0/0:21,0:21:23.98:0,24,348	1/1:8,0:18:24.01:218,24,0	1/1:13,13:26:11.20:185,11,0	1/1:20,17:36:24.07:353,24,0	0/0:25,0:25:15.02:0,15,178	0/0:20,0:22:30.08:0,30,537	0/0:16,0:17:14.74:0,15,165	1/1:8,0:20:6.01:57,6,0	1/1:10,0:12:8.97:73,9,0	1/1:21,0:27:9.01:85,9,0	0/1:7,5:12:3.96:84,0,4	1/1:8,6:14:14.96:160,15,0	0/0:21,0:22:17.78:0,18,316	1/1:5,2:6:3.01:46,3,0
chr10	47219427	.	GTA	G	256.73	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=5.352;DP=497;FS=6.285;HRun=0;HaplotypeScore=80.1177;InbreedingCoeff=0.5393;MQ=56.52;MQ0=8;MQRankSum=0.844;QD=12.84;ReadPosRankSum=-1.313;VQSLOD=2.6700;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:8.33:0,8,261	0/1:3,0:3:11.64:12,0,106	0/0:18,0:5:15.02:0,15,146	0/0:17,0:7:21:0,21,201	0/0:15,0:15:24.97:0,25,225	0/0:18,0:18:23.66:0,24,217	0/0:21,0:21:36.81:0,37,336	1/1:1,16:16:45.17:348,45,0	0/0:19,0:19:26.02:0,26,196	0/0:23,0:22:56.62:0,57,480	0/0:9,0:9:10.15:0,10,77	0/0:21,0:21:7.56:0,8,117	0/0:7,0:7:17.29:0,17,98	0/0:15,0:15:11.40:0,11,99	0/0:14,0:14:22.80:0,23,305	0/0:17,0:17:26.24:0,26,169	0/0:25,0:25:35.30:0,35,233	0/0:28,0:27:47.64:0,48,291	0/0:10,0:10:26.77:0,27,241	0/0:22,0:22:51.03:0,51,633	0/0:28,0:28:61.85:0,62,554	0/0:26,0:26:31.50:0,31,271	0/0:14,0:14:29.10:0,29,236	0/0:27,0:27:48.53:0,49,358	0/0:14,0:14:21.91:0,22,164	0/0:20,0:20:50.54:0,51,408	0/0:20,0:19:39.76:0,40,475	0/0:6,0:5:11.57:0,12,81
chr10	47219902	.	C	CCAAGAGAAAGAGCCCAGCT	16561.56	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-2.358;DP=600;FS=0.000;HRun=0;HaplotypeScore=281.8787;InbreedingCoeff=0.9956;MQ=75.13;MQ0=0;MQRankSum=-12.135;QD=154.78;ReadPosRankSum=0.445;VQSLOD=4.3519;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,117,5075	0/0:13,0:13:39.09:0,39,1698	0/0:23,0:23:68.56:0,69,2660	0/0:18,0:18:27.70:0,28,1558	0/0:11,0:11:30.10:0,30,1228	0/0:24,0:24:72.24:0,72,2781	0/0:18,0:18:51.14:0,51,1908	0/0:23,0:23:69.22:0,69,2797	0/0:24,0:24:69.23:0,69,3338	0/0:23,0:23:69.23:0,69,3443	0/0:18,0:18:54.19:0,54,2611	0/0:23,0:23:69.21:0,69,3039	0/0:26,0:26:75.23:0,75,3590	1/1:5,12:29:48.16:4228,48,0	0/0:21,0:21:57.20:0,57,2884	0/0:19,0:19:57.20:0,57,2814	0/0:31,0:31:90.28:0,90,3735	0/0:25,0:25:75.24:0,75,3473	1/1:9,4:23:66.11:3800,66,0	1/1:11,8:27:60.17:4548,60,0	1/1:15,0:15:27.05:1114,27,0	0/0:14,0:14:39.13:0,39,2009	0/0:25,0:25:69.22:0,69,3113	0/0:23,0:23:69.24:0,69,3225	0/0:18,0:18:54.16:0,54,2322	0/0:27,0:27:81.26:0,81,3742	1/1:6,5:13:33.11:2872,33,0	0/0:5,0:5:15.03:0,15,683
chr10	47223896	.	CATAT	C	7216.07	PASS	AB=0.597;AC=24;AF=0.444;AN=54;BaseQRankSum=-5.338;DP=405;FS=5.161;HRun=0;HaplotypeScore=105.8329;InbreedingCoeff=0.7468;MQ=72.26;MQ0=2;MQRankSum=-4.863;QD=27.44;ReadPosRankSum=-1.114;VQSLOD=4.1494;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:8,1:28:6.51:7,0,144	1/1:2,0:15:27.02:248,27,0	0/0:9,0:5:2.68:0,3,11	0/0:17,0:13:7.66:0,8,30	1/1:6,18:23:45.15:765,45,0	0/0:1,0:15:36.27:0,36,164	0/0:3,0:13:25.38:0,25,125	1/1:13,0:37:63.44:566,63,0	./.	1/1:6,13:19:39.13:662,39,0	1/1:2,11:13:33.11:565,33,0	0/0:0,0:4:11.14:0,11,50	0/0:7,0:13:19.95:0,20,138	0/0:2,0:7:11.23:0,11,52	1/1:1,0:14:33.03:304,33,0	0/0:1,0:8:11.19:0,11,50	1/1:0,20:20:51.17:875,51,0	1/1:3,20:23:51.17:875,51,0	0/0:4,0:16:36.71:0,37,198	0/0:4,0:11:19.80:0,20,112	0/0:2,0:5:8.39:0,8,38	0/0:7,0:8:2.80:0,3,13	0/0:2,0:6:11.19:0,11,50	0/0:3,0:6:2.80:0,3,13	1/1:0,20:20:60.21:1030,60,0	1/1:2,20:22:60.20:986,60,0	0/1:4,1:11:25.89:26,0,95	1/1:9,8:17:18.06:309,18,0
chr10	47224516	.	GACCTAAGGCA	G	9108.42	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=14.691;DP=660;FS=2.994;HRun=0;HaplotypeScore=199.7033;InbreedingCoeff=0.9981;MQ=92.21;MQ0=0;MQRankSum=-15.199;QD=75.28;ReadPosRankSum=2.056;VQSLOD=5.0445;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:84.27:0,84,4279	0/0:12,0:12:36.12:0,36,1905	0/0:31,0:31:90.28:0,90,3843	0/0:30,0:30:84.25:0,84,3785	0/0:24,0:24:72.23:0,72,3444	0/0:35,0:35:99:0,99,5103	0/0:31,0:31:90.27:0,90,4318	0/0:28,0:28:78.22:0,78,3779	1/1:3,17:20:36.12:1190,36,0	0/0:29,0:29:81.28:0,81,4204	0/0:22,0:22:60.21:0,60,3203	1/1:1,12:13:33.11:1100,33,0	1/1:0,11:11:30.57:1001,31,0	0/0:31,0:31:90.28:0,90,4479	0/0:26,0:26:78.25:0,78,3961	1/1:0,21:21:60.21:2000,60,0	0/0:24,0:24:72.23:0,72,3708	0/0:24,0:24:69.19:0,69,3478	0/0:27,0:27:78.26:0,78,3708	0/0:25,0:25:72.25:0,72,3570	0/0:27,0:27:78.27:0,78,4033	1/1:0,25:25:60.21:1859,60,0	1/1:1,13:14:36.12:1137,36,0	1/1:2,15:17:26.93:822,27,0	0/0:22,0:22:66.23:0,66,3332	0/0:30,0:30:87.29:0,87,4492	0/0:27,0:27:81.28:0,81,4300	0/0:6,0:6:18.06:0,18,961
chr10	47224720	.	A	AGTGTGTGTGTGTGT	12192.73	PASS	AB=1.000;AC=37;AF=0.685;AN=54;BaseQRankSum=2.321;DP=620;FS=8.204;HRun=0;HaplotypeScore=238.8580;InbreedingCoeff=0.7111;MQ=62.41;MQ0=5;MQRankSum=-8.488;QD=32.78;ReadPosRankSum=-5.234;VQSLOD=1.9562;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:47:58.78:0,59,2647	1/1:4,0:4:3.01:67,3,0	0/0:29,0:21:6.02:0,6,214	0/0:33,0:24:17.82:0,18,443	1/1:22,2:25:3.20:201,3,0	1/1:14,0:17:6.49:287,6,0	1/1:25,0:31:14.60:472,15,0	1/1:25,0:24:48.14:1651,48,0	1/1:13,0:15:6.02:237,6,0	1/1:18,0:17:28.34:1355,28,0	1/1:12,0:12:2.88:98,3,0	1/1:18,0:22:12.51:636,13,0	1/1:16,0:19:15.52:687,16,0	0/0:20,0:20:36.11:0,36,1210	1/1:27,0:27:15.05:480,15,0	1/1:15,9:26:23.91:1436,24,0	1/1:24,4:29:23.29:1300,23,0	0/1:20,0:19:2.49:651,0,2	0/0:19,0:18:9.03:0,9,350	0/0:16,0:18:27.06:0,27,767	0/0:35,0:35:51.17:0,51,1758	./.	1/1:9,0:9:6.01:69,6,0	1/1:21,0:22:3.48:183,3,0	1/1:17,0:15:6:74,6,0	1/1:20,2:25:48.14:2245,48,0	0/0:24,0:24:57.16:0,57,1985	1/1:6,0:6:3.01:65,3,0
chr10	47225669	.	GGTGTGAAGGTAGAGCAA	G	904.30	PASS	AB=0.955;AC=8;AF=0.143;AN=56;BaseQRankSum=4.276;DP=941;FS=0.591;HRun=0;HaplotypeScore=347.6537;InbreedingCoeff=-0.1562;MQ=49.35;MQ0=70;MQRankSum=1.379;QD=3.24;ReadPosRankSum=-3.029;VQSLOD=1.2620;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:54:99:0,139,3387	0/0:9,0:8:24.08:0,24,763	0/0:41,0:6:14.41:0,14,219	0/1:39,0:4:0.17:0,0,132	0/0:28,0:26:69.21:0,69,1568	0/1:17,0:14:99:131,0,449	0/1:26,0:12:29.93:30,0,226	0/0:42,0:35:66.32:0,66,1201	0/0:34,0:33:81.26:0,81,1661	0/0:47,0:39:81.77:0,82,1869	0/0:13,0:11:29.69:0,30,755	0/0:40,0:40:99:0,105,2730	0/0:42,0:41:99:0,114,2448	0/1:26,0:21:75.70:76,0,813	0/0:50,0:47:99:0,129,2815	0/0:37,0:37:96.31:0,96,2316	0/0:34,0:31:87.25:0,87,2442	0/0:23,0:23:20.70:0,21,1321	0/1:29,0:16:66.04:66,0,638	0/1:9,12:21:99:104,0,319	0/1:95,0:88:99:513,0,1737	0/0:33,0:31:81.67:0,82,1640	0/0:23,0:22:60.20:0,60,1486	0/0:34,0:34:83.82:0,84,2209	0/0:28,0:28:77.29:0,77,1889	0/0:36,0:33:83.78:0,84,1923	0/1:26,0:25:99:115,0,678	0/0:13,0:10:21.04:0,21,419
chr10	47227104	.	T	TC	177.52	PASS	AB=0.843;AC=4;AF=0.071;AN=56;BaseQRankSum=4.938;DP=652;FS=0.000;HRun=0;HaplotypeScore=127.6171;InbreedingCoeff=-0.0921;MQ=65.81;MQ0=7;MQRankSum=-3.810;QD=1.78;ReadPosRankSum=-4.104;VQSLOD=1.3492;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:90.20:0,90,1196	0/0:4,0:4:3.87:0,4,19	0/0:33,0:20:57.18:0,57,761	0/0:37,0:28:68.79:0,69,926	0/0:16,0:16:45.15:0,45,623	0/0:15,0:15:42.03:0,42,512	0/0:20,0:20:53.12:0,53,675	0/1:40,3:43:81.63:82,0,445	0/1:15,7:21:51.35:51,0,362	0/0:18,0:18:51.17:0,51,697	0/0:14,0:14:42.13:0,42,569	0/0:31,6:37:39.48:0,39,1033	0/1:18,5:23:79.65:80,0,496	0/0:27,0:27:81.27:0,81,1127	0/0:28,0:28:4.55:0,5,145	0/0:18,8:26:3.25:0,3,586	0/0:32,0:32:96.32:0,96,1335	0/0:18,0:18:51.13:0,51,689	0/0:15,0:15:45.14:0,45,609	0/0:12,0:12:36.09:0,36,484	0/0:60,0:60:99:0,168,2275	0/1:10,2:12:73.72:74,0,169	0/0:11,0:11:17.99:0,18,210	0/0:29,5:33:47.58:0,48,536	0/0:17,0:17:51.15:0,51,673	0/0:17,0:17:51.16:0,51,696	0/0:20,0:20:60.20:0,60,832	0/0:10,0:10:30.10:0,30,418
chr10	47227106	.	C	CTCTG	2922.70	PASS	AB=1.000;AC=19;AF=0.352;AN=54;BaseQRankSum=8.912;DP=669;FS=0.509;HRun=0;HaplotypeScore=161.6697;InbreedingCoeff=0.8344;MQ=63.69;MQ0=7;MQRankSum=-2.732;QD=11.60;ReadPosRankSum=-2.052;VQSLOD=3.1109;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:72.18:0,72,1114	1/1:1,3:4:9.03:215,9,0	0/0:33,0:18:5.30:0,5,87	0/0:42,0:29:25.74:0,26,286	0/0:17,0:17:42.06:0,42,622	0/0:14,0:15:14.23:0,14,110	0/1:15,0:18:31.42:31,0,42	1/1:46,0:46:28.83:338,29,0	1/1:22,0:21:17.04:189,17,0	0/0:18,0:18:45.15:0,45,709	0/0:14,0:14:36.12:0,36,564	1/1:37,0:37:34:495,34,0	1/1:22,0:22:16.85:211,17,0	0/0:26,0:26:54.15:0,54,797	1/1:10,17:28:0.69:1027,1,0	1/1:26,0:26:24.08:353,24,0	0/0:33,0:33:56.68:0,57,870	0/0:20,0:20:40.89:0,41,575	0/0:14,0:14:18.03:0,18,287	0/0:11,0:12:17.98:0,18,256	0/0:62,0:62:99:0,119,1768	1/1:13,0:12:13.36:127,13,0	./.	1/1:36,0:35:12.49:136,12,0	0/0:16,0:17:27.07:0,27,385	0/0:16,0:17:33.11:0,33,505	0/0:21,0:21:24.05:0,24,336	0/0:13,0:13:30.08:0,30,452
chr10	47227138	.	G	GT	1773.30	PASS	AB=0.787;AC=11;AF=0.196;AN=56;BaseQRankSum=10.509;DP=699;FS=0.000;HRun=1;HaplotypeScore=136.8579;InbreedingCoeff=-0.2070;MQ=60.65;MQ0=7;MQRankSum=-5.032;QD=7.09;ReadPosRankSum=-1.631;VQSLOD=-0.1014;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,108,1507	0/1:5,0:5:3.73:4,0,34	0/0:38,0:21:37.26:0,37,641	0/0:64,0:39:23.70:0,24,638	0/0:21,0:21:57.19:0,57,794	0/1:14,8:22:17.70:184,0,18	0/1:13,4:17:10.48:124,0,10	0/1:18,9:26:99:430,0,376	0/1:14,9:22:99:119,0,258	0/0:27,0:27:78.22:0,78,1054	0/0:16,0:16:45.15:0,45,629	0/1:21,16:37:99:447,0,512	0/1:10,7:17:99:105,0,304	0/0:24,0:24:66.19:0,66,885	0/1:29,0:29:1.97:2,0,367	0/1:12,9:21:99:279,0,151	0/0:31,0:31:93.21:0,93,1254	0/0:25,0:25:68.27:0,68,982	0/0:10,0:10:30.10:0,30,414	0/0:8,0:8:24.05:0,24,315	0/0:53,0:53:99:0,151,2098	0/1:13,7:19:99:107,0,294	0/0:5,5:10:12.04:0,12,168	0/1:24,8:31:99:115,0,183	0/0:22,0:22:66.18:0,66,886	0/0:22,0:22:63.17:0,63,845	0/0:16,0:16:48.13:0,48,635	0/0:19,0:19:57.19:0,57,797
chr10	47227146	.	T	TCTG	1303.86	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=6.886;DP=688;FS=0.574;HRun=0;HaplotypeScore=163.7638;InbreedingCoeff=0.6621;MQ=65.88;MQ0=7;MQRankSum=-7.241;QD=19.76;ReadPosRankSum=-4.257;VQSLOD=2.8408;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,111,1780	0/0:6,0:6:12.04:0,12,197	0/0:43,0:27:52.30:0,52,894	0/0:64,0:44:56.73:0,57,751	0/0:18,0:18:48.12:0,48,787	1/1:11,13:24:40.62:774,41,0	1/1:7,14:21:30.10:634,30,0	0/1:21,0:21:24.62:25,0,501	0/0:21,0:20:22.33:0,22,377	0/0:27,0:27:78.27:0,78,1312	0/0:14,0:14:42.07:0,42,621	0/0:34,0:34:20.44:0,20,732	0/0:18,0:18:8.18:0,8,507	0/0:20,0:20:60.21:0,60,1004	0/0:31,0:31:81.24:0,81,1310	0/0:20,0:20:0.66:0,1,236	0/0:29,0:29:81.26:0,81,1350	0/0:24,0:24:67.70:0,68,1143	0/0:12,0:12:33.10:0,33,528	0/0:9,0:9:27.09:0,27,452	0/0:50,0:50:99:0,144,2440	0/0:19,0:18:35.86:0,36,558	0/0:8,0:8:12.04:0,12,205	0/0:33,0:32:18.57:0,19,344	0/0:22,0:22:66.19:0,66,1049	0/0:23,0:23:66.20:0,66,1046	0/0:15,0:15:45.15:0,45,734	0/0:20,0:20:60.21:0,60,1018
chr10	47227148	.	T	TG	534.54	PASS	AB=0.860;AC=7;AF=0.125;AN=56;BaseQRankSum=9.077;DP=680;FS=2.284;HRun=0;HaplotypeScore=134.7334;InbreedingCoeff=0.1030;MQ=68.97;MQ0=5;MQRankSum=-4.852;QD=4.18;ReadPosRankSum=-0.905;VQSLOD=3.3363;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:40:99:0,117,1580	0/0:6,0:6:11.15:0,11,166	0/0:43,1:28:58.15:0,58,808	0/0:72,0:49:68.34:0,68,779	0/0:19,0:19:48.12:0,48,649	0/1:23,0:23:24:24,0,93	1/1:20,0:20:5.30:71,5,0	0/0:20,0:20:56.47:0,56,617	0/1:17,3:19:40.45:40,0,303	0/0:27,0:27:78.26:0,78,1089	0/0:14,0:14:42.10:0,42,559	0/1:20,10:31:99:266,0,585	0/1:13,2:15:46.48:46,0,419	0/0:20,0:20:60.20:0,60,835	0/0:31,0:31:84.28:0,84,1173	0/1:14,5:19:99:215,0,246	0/0:29,0:29:87.25:0,87,1193	0/0:23,0:23:69.19:0,69,943	0/0:12,0:12:33.10:0,33,446	0/0:9,0:9:27.09:0,27,377	0/0:50,0:50:99:0,147,2030	0/0:16,1:16:32.28:0,32,460	0/0:6,2:8:12.04:0,12,168	0/0:27,3:29:5.62:0,6,436	0/0:22,0:22:66.15:0,66,883	0/0:23,0:23:69.22:0,69,949	0/0:16,0:16:45.15:0,45,629	0/0:20,0:20:60.20:0,60,839
chr10	47227627	.	TA	T	1915.18	PASS	AB=0.857;AC=11;AF=0.196;AN=56;BaseQRankSum=7.702;DP=567;FS=13.624;HRun=11;HaplotypeScore=59.5657;InbreedingCoeff=0.8190;MQ=71.59;MQ0=0;MQRankSum=-0.249;QD=15.57;ReadPosRankSum=1.132;VQSLOD=2.9805;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:75.17:0,75,792	0/0:10,0:10:27:0,27,260	0/0:18,0:16:39.05:0,39,385	0/0:14,1:15:5.95:0,6,229	0/0:22,0:22:57.09:0,57,582	0/0:14,0:14:39.08:0,39,408	0/0:22,2:24:16.88:0,17,590	0/0:20,1:21:29.26:0,29,476	0/0:24,2:26:13.86:0,14,544	0/0:28,1:29:41.52:0,42,647	0/0:26,0:26:60.15:0,60,640	0/0:19,0:19:42:0,42,431	0/0:21,3:24:7.85:0,8,488	1/1:2,14:16:41.94:345,42,0	0/0:16,1:17:20.46:0,20,416	0/0:11,1:12:11.44:0,11,321	0/0:20,2:22:29.48:0,29,512	0/0:15,1:18:23.31:0,23,437	1/1:10,21:32:64.89:517,65,0	1/1:4,17:21:35.71:274,36,0	1/1:2,16:20:49.02:381,49,0	0/0:22,0:22:45.11:0,45,480	0/0:18,0:18:48.12:0,48,512	0/0:17,0:17:51.12:0,51,537	0/0:11,1:12:2.43:0,2,231	0/0:31,1:32:47.52:0,48,699	1/1:2,26:28:68.90:566,69,0	0/1:5,1:6:6.58:7,0,142
chr10	47228141	.	AAC	A	1400.15	PASS	AB=0.985;AC=24;AF=0.429;AN=56;BaseQRankSum=7.573;DP=437;FS=24.959;HRun=0;HaplotypeScore=80.3035;InbreedingCoeff=0.1623;MQ=70.95;MQ0=0;MQRankSum=-1.812;QD=4.67;ReadPosRankSum=10.280;VQSLOD=0.1138;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:29.77:0,30,300	0/0:9,0:9:13.24:0,13,106	0/1:8,1:9:23.09:23,0,128	0/1:8,0:8:3.49:3,0,199	0/1:23,0:23:75.96:76,0,87	0/0:9,0:9:26.87:0,27,227	0/0:11,0:11:23.41:0,23,148	0/0:15,0:15:35.87:0,36,366	0/1:22,0:22:25.06:114,0,25	0/1:24,1:25:99:113,0,108	1/1:9,1:10:1.28:90,1,0	1/1:16,1:17:27.69:150,28,0	0/1:19,0:19:57.57:90,0,58	0/0:16,0:16:33.85:0,34,257	0/0:11,0:11:31.64:0,32,209	0/1:20,0:20:6.09:123,0,6	1/1:17,0:17:14.41:113,14,0	0/1:18,0:18:66.88:76,0,67	0/0:15,0:15:37.78:0,38,258	0/0:17,0:17:40.71:0,41,226	0/1:15,0:15:13.49:13,0,165	1/1:6,1:7:11.04:56,11,0	0/1:11,0:11:1.37:46,0,1	1/1:22,1:23:6.33:164,6,0	0/1:12,0:12:44.24:44,0,67	0/1:25,1:26:3.24:130,0,3	0/0:19,0:19:51.34:0,51,296	1/1:17,0:17:40.44:155,40,0
chr10	47228144	.	ACC	A	6201.37	PASS	AB=0.809;AC=33;AF=0.589;AN=56;BaseQRankSum=-8.356;DP=430;FS=1.565;HRun=11;HaplotypeScore=63.7562;InbreedingCoeff=0.7355;MQ=71.80;MQ0=0;MQRankSum=-0.534;QD=21.09;ReadPosRankSum=4.323;VQSLOD=4.1801;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:13:12.90:0,13,145	0/1:3,1:8:18.29:38,0,18	0/1:11,0:10:26.11:26,0,130	0/0:11,0:8:12.24:0,12,125	1/1:5,17:22:42.09:447,42,0	0/0:7,0:9:5.49:0,5,34	0/0:3,0:10:12.48:0,12,43	0/0:11,0:15:11.51:0,12,128	1/1:4,19:23:31.84:434,32,0	1/1:8,16:24:51.10:542,51,0	1/1:2,8:10:27.06:284,27,0	1/1:2,14:16:33.08:351,33,0	1/1:4,15:19:36.08:383,36,0	0/0:11,0:15:12.85:0,13,60	0/0:4,0:11:22.96:0,23,94	1/1:3,15:19:47.48:485,47,0	1/1:1,15:16:39.10:415,39,0	1/1:5,13:18:39.09:415,39,0	0/0:8,0:15:25.45:0,25,103	0/0:10,0:17:29.54:0,30,103	0/1:10,0:13:23.70:24,0,84	1/1:1,6:7:12.03:128,12,0	1/1:2,9:11:21.05:224,21,0	1/1:3,19:22:57.14:606,57,0	1/1:4,7:11:21.04:223,21,0	1/1:4,22:26:66.13:693,66,0	0/0:10,0:19:34.93:0,35,121	1/1:2,16:18:25.18:485,25,0
chr10	47228410	.	G	GA	16491.56	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-9.154;DP=581;FS=0.000;HRun=6;HaplotypeScore=50.1285;InbreedingCoeff=0.9806;MQ=74.24;MQ0=1;MQRankSum=-4.533;QD=31.96;ReadPosRankSum=1.700;VQSLOD=5.0334;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:93.21:0,93,948	1/1:2,11:13:24.08:302,24,0	0/0:19,0:17:29.35:0,29,323	0/0:14,0:13:19.78:0,20,225	1/1:3,24:27:69.22:866,69,0	1/1:2,19:21:57.18:717,57,0	1/1:1,15:16:39.12:491,39,0	1/1:4,24:28:72.18:886,72,0	1/1:5,20:25:57.18:717,57,0	1/1:2,16:18:48.15:603,48,0	1/1:2,14:16:42.09:510,42,0	1/1:4,20:24:60.19:755,60,0	1/1:2,24:26:63.20:793,63,0	1/1:3,17:20:51.16:637,51,0	1/1:1,21:22:60.15:737,60,0	1/1:2,30:32:87.28:1095,87,0	1/1:2,22:24:57.18:717,57,0	1/1:4,20:24:54.17:679,54,0	1/1:4,23:27:69.21:855,69,0	1/1:1,16:17:45.14:566,45,0	1/1:1,25:26:75.24:944,75,0	1/1:1,4:5:12.04:151,12,0	1/1:2,5:7:15.05:189,15,0	1/1:0,20:20:57.18:717,57,0	1/1:1,17:18:42.13:528,42,0	1/1:3,22:25:66.21:830,66,0	1/1:3,19:22:57.18:716,57,0	1/1:0,13:13:39.12:490,39,0
chr10	47228724	.	CTAAAAAAAAAAA	C	3444.11	PASS	AB=0.913;AC=33;AF=0.660;AN=50;BaseQRankSum=8.174;DP=345;FS=0.811;HRun=0;HaplotypeScore=135.7247;InbreedingCoeff=0.0883;MQ=30.76;MQ0=32;MQRankSum=-1.067;QD=13.67;ReadPosRankSum=6.311;VQSLOD=1.6982;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:21:46.48:0,46,1545	1/1:8,0:8:18.06:466,18,0	./.	./.	./.	0/1:9,0:9:56.82:127,0,57	0/1:13,0:12:33.13:33,0,143	0/1:20,0:19:0.01:2,0,0	0/1:9,1:13:26.48:222,0,26	0/1:5,0:5:0:0,0,0	0/0:6,0:6:3.55:0,4,10	1/1:7,0:10:8.48:176,8,0	0/1:12,0:13:14.01:54,0,14	1/1:7,3:11:11.99:307,12,0	1/1:23,0:23:30.10:776,30,0	0/1:8,0:9:12.82:53,0,13	1/1:17,4:21:5.50:344,5,0	1/1:16,1:15:6.64:98,7,0	0/1:16,0:11:0.22:75,0,0	0/0:5,0:5:2.65:0,3,14	0/1:8,2:10:12.88:71,0,13	1/1:8,0:10:5.16:117,5,0	1/1:3,0:3:0.61:2,1,0	0/0:13,0:10:0.77:0,1,2	1/1:10,1:10:5.77:175,6,0	1/1:3,0:4:2.95:79,3,0	1/1:8,2:10:6.42:178,6,0	1/1:11,1:9:3.01:89,3,0
chr10	47228737	.	AAAAAAAAAAAAAAAAAT	A	1989.80	PASS	AB=1.000;AC=7;AF=0.130;AN=54;BaseQRankSum=6.596;DP=404;FS=7.055;HRun=0;HaplotypeScore=164.0683;InbreedingCoeff=0.4673;MQ=49.06;MQ0=42;MQRankSum=-4.666;QD=24.27;ReadPosRankSum=6.716;VQSLOD=1.4413;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:31:79.79:0,80,4433	1/1:2,7:9:18.06:765,18,0	0/1:37,0:6:4.46:4,0,553	0/0:26,0:4:9.03:0,9,122	0/0:10,0:10:6.02:0,6,155	0/1:14,0:13:20.21:20,0,483	0/0:16,0:15:4.83:0,5,397	./.	0/0:16,0:16:40.32:0,40,849	0/0:7,0:7:21.07:0,21,420	0/0:9,0:9:20.80:0,21,387	0/0:14,0:12:33:0,33,623	0/0:14,0:14:42.06:0,42,981	0/0:12,0:11:22.46:0,22,315	1/1:1,16:17:29.95:1328,30,0	0/0:13,0:12:30.08:0,30,747	0/0:21,0:22:52.52:0,53,827	0/0:16,0:13:34:0,34,685	0/0:18,0:11:11.58:0,12,447	0/0:7,0:7:17.95:0,18,335	0/0:13,0:11:11.10:0,11,545	0/0:10,0:9:23.05:0,23,371	0/0:5,0:5:15.05:0,15,365	0/0:22,0:21:42.71:0,43,925	0/0:9,0:8:6.94:0,7,301	0/1:5,0:5:3.65:4,0,225	0/0:13,0:13:30.39:0,30,585	0/0:16,0:13:30.48:0,30,566
chr10	47228742	.	AAAAAAAAAAAAT	A	3027.33	PASS	AB=0.968;AC=25;AF=0.446;AN=56;BaseQRankSum=9.649;DP=377;FS=16.625;HRun=0;HaplotypeScore=118.9351;InbreedingCoeff=-0.1003;MQ=57.17;MQ0=35;MQRankSum=-6.260;QD=11.83;ReadPosRankSum=9.095;VQSLOD=-0.1979;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:30:73.52:0,74,2807	1/1:9,0:9:18.06:525,18,0	0/1:36,0:6:4.49:4,0,435	0/0:26,0:7:17.86:0,18,145	0/0:12,0:12:27.88:0,28,154	1/1:9,1:9:26.96:394,27,0	0/1:1,10:11:3.50:92,0,3	1/1:3,0:2:2.98:21,3,0	0/1:12,0:11:93.98:165,0,94	0/0:10,0:10:27.86:0,28,176	0/0:5,0:5:12.54:0,13,83	0/1:9,0:7:67.09:126,0,67	0/1:9,0:9:23.83:24,0,168	0/1:9,0:8:54.53:218,0,55	1/1:16,0:16:30.10:876,30,0	0/1:11,0:10:23.98:24,0,142	0/1:22,0:22:99:224,0,238	0/1:16,0:13:30.96:31,0,208	0/1:25,0:19:13.96:14,0,214	0/0:14,0:13:28.91:0,29,156	0/1:19,0:17:25.48:25,0,163	1/1:4,0:3:4.56:95,5,0	0/0:4,0:4:9:0,9,79	0/0:19,0:18:37.72:0,38,280	0/1:7,0:6:24.98:152,0,25	0/1:8,0:8:39.69:40,0,83	0/1:10,0:10:99:111,0,121	0/1:10,0:9:42.50:42,0,145
chr10	47231456	.	C	CTGTGTG	4981.28	PASS	AB=1.000;AC=47;AF=0.940;AN=50;BaseQRankSum=-1.717;DP=608;FS=7.252;HRun=0;HaplotypeScore=174.3341;InbreedingCoeff=0.2478;MQ=59.12;MQ0=5;MQRankSum=-0.512;QD=9.43;ReadPosRankSum=0.753;VQSLOD=3.4856;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:44:0.32:31,0,0	./.	./.	0/1:32,0:25:0:0,0,0	1/1:18,0:18:2.99:77,3,0	1/1:23,0:21:6.01:112,6,0	1/1:22,0:21:9.90:169,10,0	1/1:22,0:20:21.64:360,22,0	1/1:19,6:27:9.03:288,9,0	1/1:29,0:27:29.10:614,29,0	1/1:14,0:15:8.44:190,8,0	1/1:14,0:19:3.48:51,3,0	0/0:12,0:12:5.54:0,6,77	1/1:22,0:21:2.22:60,2,0	1/1:16,0:15:3.01:88,3,0	1/1:14,5:21:7.18:195,7,0	1/1:20,1:26:9.01:235,9,0	1/1:14,1:18:15.94:333,16,0	1/1:24,0:22:15.94:372,16,0	1/1:16,0:15:2.94:18,3,0	./.	1/1:16,0:16:14.73:325,15,0	1/1:19,0:19:5.59:78,6,0	1/1:16,0:34:11.01:242,11,0	1/1:20,0:20:8.95:204,9,0	1/1:16,0:16:23.11:520,23,0	1/1:17,0:17:12.02:237,12,0	1/1:10,0:10:6.91:182,7,0
chr10	47231666	.	C	CT	4555	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=4.918;DP=607;FS=0.768;HRun=8;HaplotypeScore=97.6745;InbreedingCoeff=0.9989;MQ=80.91;MQ0=0;MQRankSum=-3.725;QD=27.11;ReadPosRankSum=0.622;VQSLOD=4.7046;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:95.99:0,96,867	0/0:12,0:12:27.01:0,27,247	0/0:18,0:18:38.83:0,39,344	0/0:18,0:18:42.02:0,42,384	1/1:7,26:33:50.80:835,51,0	0/0:16,0:16:38.97:0,39,349	0/0:22,0:22:50.99:0,51,457	0/0:33,0:33:69.01:0,69,626	0/0:20,0:20:51.01:0,51,461	1/1:1,20:21:60.17:683,60,0	1/1:3,11:14:27.08:311,27,0	0/0:11,0:11:33.02:0,33,302	0/0:25,0:25:68.99:0,69,623	0/0:22,0:22:60.03:0,60,549	0/0:24,0:22:63.01:0,63,572	0/0:24,0:24:66.02:0,66,597	1/1:5,20:25:57.17:658,57,0	1/1:1,14:15:39.12:450,39,0	0/0:21,0:21:57.03:0,57,522	0/0:18,0:18:48.02:0,48,439	0/0:31,0:31:71.98:0,72,648	0/0:24,0:24:66.03:0,66,604	0/0:17,0:17:44.95:0,45,402	0/0:30,0:30:81.02:0,81,736	1/1:3,21:23:63.19:723,63,0	1/1:2,21:23:60.12:666,60,0	0/0:21,0:21:57.02:0,57,522	1/1:3,9:13:21.02:227,21,0
chr10	47232017	.	C	CTGGAATCCCAGTGTCACCTTTTCCC	38075.24	PASS	AB=0.718;AC=54;AF=0.964;AN=56;BaseQRankSum=0.103;DP=250;FS=41.093;HRun=0;HaplotypeScore=297.7456;InbreedingCoeff=-0.0450;MQ=61.61;MQ0=0;MQRankSum=-2.902;QD=152.30;ReadPosRankSum=2.225;VQSLOD=3.3450;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:14:30.10:2716,30,0	1/1:6,0:6:18.06:1682,18,0	0/1:3,0:7:17.60:483,0,18	0/1:3,1:4:14.61:287,0,15	1/1:8,0:8:12.03:898,12,0	1/1:10,0:10:28.88:1562,29,0	1/1:6,0:6:18.06:1140,18,0	1/1:12,0:12:33.10:1742,33,0	1/1:12,0:12:29.78:1497,30,0	1/1:9,0:9:18.06:1146,18,0	1/1:4,0:4:12.04:743,12,0	1/1:9,0:9:19.53:622,20,0	1/1:14,0:14:33.58:2745,34,0	1/1:7,0:7:14.88:708,15,0	1/1:16,0:16:42.27:3266,42,0	1/1:9,0:9:21.40:1022,21,0	1/1:8,0:8:18.06:824,18,0	1/1:5,0:5:12.04:393,12,0	1/1:10,0:10:30.10:1131,30,0	1/1:11,0:11:33.11:1691,33,0	1/1:6,0:6:9.50:560,10,0	1/1:11,0:11:30.09:2040,30,0	1/1:8,0:8:18.06:979,18,0	1/1:7,0:7:18.06:1105,18,0	1/1:11,0:11:30.10:2218,30,0	1/1:12,0:12:33.11:2233,33,0	1/1:8,0:8:24.08:1754,24,0	1/1:6,0:6:15.05:888,15,0
chr10	47234506	.	GCACGCACGT	G	15544.86	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=17.464;DP=649;FS=0.330;HRun=0;HaplotypeScore=197.5423;InbreedingCoeff=0.9927;MQ=79.00;MQ0=0;MQRankSum=-17.401;QD=59.79;ReadPosRankSum=3.332;VQSLOD=4.6822;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,108,4874	0/0:12,0:12:36.12:0,36,1649	0/0:24,0:24:72.23:0,72,2847	0/0:15,0:15:27.36:0,27,1563	1/1:3,16:19:21.07:663,21,0	0/0:18,0:18:54.19:0,54,2652	0/0:32,0:32:96.28:0,96,4199	0/0:21,0:21:63.21:0,63,2684	0/0:33,0:33:87.28:0,87,4138	1/1:3,18:21:54.16:1516,54,0	1/1:1,15:16:36.12:1134,36,0	0/0:38,0:38:99:0,111,5109	0/0:34,0:34:99:0,102,4765	1/1:1,21:22:48.16:1515,48,0	0/0:36,0:36:99:0,108,4938	0/0:17,0:17:51.18:0,51,2530	1/1:3,14:17:33.05:965,33,0	1/1:6,25:31:50.86:1611,51,0	1/1:3,10:13:30.06:750,30,0	1/1:0,17:17:33.11:923,33,0	1/1:3,16:19:15.05:428,15,0	0/0:24,0:24:69.24:0,69,3394	0/0:12,0:12:36.10:0,36,1459	0/0:36,0:36:99:0,99,4006	1/1:3,29:32:66.10:1875,66,0	1/1:1,26:27:78.27:2461,78,0	1/1:1,18:19:42.14:1326,42,0	1/1:0,7:7:12.04:379,12,0
chr10	47235178	.	C	CT	1401.59	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=3.315;DP=392;FS=15.114;HRun=5;HaplotypeScore=58.8602;InbreedingCoeff=0.7301;MQ=76.22;MQ0=5;MQRankSum=0.046;QD=6.90;ReadPosRankSum=-2.245;VQSLOD=-0.6388;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:29.23:0,29,311	0/1:3,0:3:0:0,0,0	0/1:39,0:17:43.30:43,0,131	0/0:33,0:16:9.15:0,9,222	1/1:6,0:6:8.96:67,9,0	0/0:8,0:8:22.21:0,22,102	0/0:22,0:22:37.35:0,37,184	0/0:10,0:10:19.33:0,19,96	0/0:12,0:11:23.08:0,23,224	1/1:2,7:9:17.90:134,18,0	1/1:7,0:7:8.59:63,9,0	0/0:12,0:12:26.97:0,27,265	0/0:11,0:10:24.04:0,24,257	1/1:7,0:7:20.88:173,21,0	0/1:18,0:18:24.45:24,0,75	0/0:10,0:10:15.67:0,16,177	1/1:7,15:22:6.45:60,6,0	1/1:7,16:22:3.26:14,3,0	1/1:5,6:11:19.50:177,19,0	1/1:4,0:4:8.98:71,9,0	1/1:18,0:17:39.75:322,40,0	0/0:16,0:16:27.04:0,27,282	0/0:14,0:14:18.02:0,18,185	0/0:26,0:26:47.32:0,47,513	1/1:11,0:11:8.50:64,9,0	1/1:2,10:12:29.75:214,30,0	1/1:6,0:6:4.86:45,5,0	1/1:7,0:7:17.93:137,18,0
chr10	47235878	.	AC	A	2775.73	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=9.778;DP=648;FS=0.445;HRun=2;HaplotypeScore=58.4289;InbreedingCoeff=0.9995;MQ=89.03;MQ0=0;MQRankSum=-2.422;QD=32.28;ReadPosRankSum=-1.765;VQSLOD=2.8189;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:69.23:0,69,1026	1/1:0,8:8:24.08:312,24,0	0/0:24,0:24:69.01:0,69,921	0/0:24,0:24:72.24:0,72,1028	0/0:42,0:42:99:0,126,1865	1/1:0,20:20:48.16:623,48,0	1/1:1,11:12:36.11:459,36,0	1/1:2,22:24:63.20:817,63,0	0/0:27,0:27:81.24:0,81,1165	0/0:33,0:33:93.30:0,93,1359	0/0:25,0:25:75.25:0,75,1102	0/0:21,0:21:63.18:0,63,902	0/0:33,0:33:96.29:0,96,1377	0/0:19,0:19:57.19:0,57,854	1/1:0,22:22:57.19:740,57,0	0/0:31,0:31:93.32:0,93,1392	0/0:21,0:21:63.21:0,63,942	0/0:16,0:16:42.14:0,42,629	0/0:21,0:21:63.19:0,63,888	0/0:24,0:24:72.24:0,72,1079	0/0:17,0:17:51.17:0,51,763	0/0:16,0:16:48.15:0,48,696	0/0:29,0:29:81.26:0,81,1193	0/0:16,0:16:48.15:0,48,698	0/0:29,0:29:87.27:0,87,1264	0/0:29,0:29:84.28:0,84,1257	0/0:26,0:26:75.23:0,75,1100	0/0:15,0:15:45.14:0,45,647
chr10	47236106	.	CT	C	7835.05	PASS	AB=0.727;AC=36;AF=0.643;AN=56;BaseQRankSum=9.394;DP=540;FS=2.630;HRun=10;HaplotypeScore=57.9300;InbreedingCoeff=0.8411;MQ=74.24;MQ0=1;MQRankSum=-1.933;QD=20.46;ReadPosRankSum=1.503;VQSLOD=5.9373;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:81.22:0,81,895	1/1:3,7:10:17.97:156,18,0	0/1:13,1:14:24.96:25,0,151	0/0:13,0:14:26.85:0,27,300	1/1:4,32:36:86.91:748,87,0	1/1:0,19:19:50.99:443,51,0	1/1:1,12:13:29.99:260,30,0	1/1:3,26:29:77.98:677,78,0	0/0:9,0:11:3.87:0,4,254	1/1:5,28:33:83.97:729,84,0	1/1:3,20:23:56.97:495,57,0	0/0:16,0:16:48.13:0,48,530	0/0:15,0:15:42.08:0,42,446	1/1:2,9:11:23.98:208,24,0	1/1:3,20:23:50.98:443,51,0	0/0:20,0:20:60.16:0,60,664	1/1:3,20:23:29.80:488,30,0	1/1:4,16:20:44.99:391,45,0	0/1:3,9:12:3.22:201,0,3	1/1:3,15:18:38.97:339,39,0	1/1:1,16:17:44.99:391,45,0	0/0:12,0:12:32.95:0,33,339	0/0:13,2:15:16.06:0,16,405	0/0:21,0:21:48.13:0,48,530	1/1:4,24:28:71.97:625,72,0	1/1:2,21:23:62.93:539,63,0	1/1:1,15:16:44.99:391,45,0	1/1:3,11:14:32.99:287,33,0
chr10	47236548	.	AC	A	9957.81	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=15.822;DP=621;FS=3.902;HRun=3;HaplotypeScore=61.7692;InbreedingCoeff=0.9998;MQ=69.87;MQ0=0;MQRankSum=-1.408;QD=33.87;ReadPosRankSum=3.287;VQSLOD=5.4748;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,111,1554	0/0:10,0:10:27.07:0,27,369	0/0:17,0:16:45.06:0,45,564	0/0:17,1:17:44.04:0,44,523	1/1:1,36:37:99:1227,102,0	0/0:24,0:24:66.22:0,66,948	0/0:18,0:18:51.17:0,51,734	0/0:32,0:32:93.27:0,93,1272	0/0:17,0:17:51.14:0,51,709	1/1:1,27:28:81.24:992,81,0	1/1:0,17:17:51.16:632,51,0	0/0:23,0:23:69.23:0,69,991	0/0:19,0:19:57.19:0,57,818	1/1:1,12:13:36.11:446,36,0	0/0:20,0:20:60.18:0,60,829	0/0:17,0:17:48.16:0,48,691	1/1:1,24:25:69.22:855,69,0	1/1:0,26:26:75.24:930,75,0	1/1:1,18:19:54.11:631,54,0	1/1:0,16:16:48.02:556,48,0	1/1:0,16:16:42.13:520,42,0	0/0:28,0:28:81.18:0,81,1123	0/0:27,0:27:81.27:0,81,1162	0/0:18,0:18:48.15:0,48,674	1/1:2,25:27:66.21:818,66,0	1/1:1,26:27:78.20:938,78,0	1/1:0,23:23:60.18:744,60,0	1/1:0,20:20:54.17:669,54,0
chr10	47238275	.	AGCACT	A	4312.97	PASS	AB=0.550;AC=9;AF=0.161;AN=56;BaseQRankSum=11.154;DP=460;FS=1.637;HRun=0;HaplotypeScore=86.4801;InbreedingCoeff=0.8336;MQ=75.60;MQ0=0;MQRankSum=-7.406;QD=56.01;ReadPosRankSum=0.231;VQSLOD=4.8087;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:66.20:0,66,2058	0/0:3,0:3:9.03:0,9,291	0/0:14,0:14:40.38:0,40,1261	0/0:11,0:11:30.10:0,30,860	0/0:26,0:26:78.25:0,78,2447	0/0:19,0:19:57.20:0,57,1792	0/0:12,0:12:33.11:0,33,1066	0/0:21,0:21:63.21:0,63,1879	0/0:16,0:16:45.15:0,45,1402	0/0:20,0:20:60.21:0,60,1940	0/0:22,0:22:66.23:0,66,2105	0/0:16,0:16:42.14:0,42,1357	0/0:7,0:7:17.53:0,18,579	0/1:2,9:11:72.86:444,0,73	0/0:12,0:12:36.12:0,36,1152	0/0:16,0:16:45.14:0,45,1382	0/0:27,0:27:78.24:0,78,2445	0/0:14,0:14:36.12:0,36,1161	1/1:0,3:3:9.03:201,9,0	1/1:1,32:33:90.31:2003,90,0	1/1:0,8:8:18.06:398,18,0	0/0:16,0:16:48.16:0,48,1539	0/0:16,0:16:48.16:0,48,1481	0/0:15,0:15:42.13:0,42,1285	0/0:16,0:16:48.16:0,48,1547	0/0:25,0:25:72.24:0,72,2255	1/1:2,20:22:57.20:1268,57,0	0/0:15,0:15:45.14:0,45,1267
chr10	47238414	.	C	CA	4266.51	PASS	AB=0.646;AC=33;AF=0.589;AN=56;BaseQRankSum=5.169;DP=535;FS=4.914;HRun=11;HaplotypeScore=80.4179;InbreedingCoeff=0.7357;MQ=55.87;MQ0=9;MQRankSum=-3.296;QD=12.05;ReadPosRankSum=-1.470;VQSLOD=4.4296;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:30:54.48:0,54,555	1/1:3,1:7:8.48:41,8,0	0/0:6,0:6:17.92:0,18,137	0/0:11,0:10:0.01:0,0,97	1/1:7,20:27:59.99:569,60,0	1/1:6,2:19:37.26:218,37,0	1/1:4,2:11:14.20:71,14,0	1/1:25,1:44:60.31:319,60,0	0/0:21,0:19:38.79:0,39,297	0/1:8,15:24:15.80:374,0,16	0/1:10,5:18:19.91:138,0,20	0/0:16,0:16:38.80:0,39,298	0/0:11,0:11:20.85:0,21,156	1/1:3,1:15:25.75:136,26,0	0/1:9,1:19:0.36:78,0,0	0/0:22,0:22:25.94:0,26,330	1/1:9,12:21:30.06:305,30,0	1/1:5,15:19:24.87:434,25,0	1/1:11,0:13:17.04:85,17,0	1/1:6,1:28:60.01:326,60,0	1/1:2,0:4:2.84:14,3,0	0/0:22,0:23:52.80:0,53,398	0/0:17,0:17:35.79:0,36,276	0/0:20,0:19:41.25:0,41,324	1/1:3,14:17:39.08:396,39,0	1/1:8,13:21:18.78:360,19,0	1/1:11,0:24:22.43:206,22,0	1/1:8,7:13:20.88:197,21,0
chr10	47238778	.	T	TA	5216.28	PASS	AB=0.797;AC=27;AF=0.482;AN=56;BaseQRankSum=-2.765;DP=613;FS=1.102;HRun=10;HaplotypeScore=72.2189;InbreedingCoeff=0.8164;MQ=71.92;MQ0=0;MQRankSum=-0.138;QD=16.05;ReadPosRankSum=-1.576;VQSLOD=4.8536;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:56.84:0,57,462	0/0:14,0:14:35.94:0,36,295	0/1:9,1:10:17.21:17,0,68	0/1:9,1:10:15.42:15,0,60	1/1:11,22:33:60.11:628,60,0	0/0:30,0:30:80.88:0,81,665	0/0:9,0:9:20.97:0,21,172	0/0:36,0:37:88.01:0,88,712	0/0:10,0:11:16.98:0,17,129	1/1:7,27:34:59.55:831,60,0	1/1:6,17:23:20.43:411,20,0	0/0:17,0:18:34.95:0,35,277	0/0:29,0:30:73.93:0,74,597	1/1:5,1:20:20.14:111,20,0	0/0:25,0:27:69.99:0,70,553	0/0:18,0:20:49.02:0,49,381	1/1:2,17:19:48.12:511,48,0	1/1:1,6:7:18.05:192,18,0	1/1:4,0:13:23.23:110,23,0	1/1:8,1:27:37.99:211,38,0	1/1:4,0:16:25.92:143,26,0	0/0:28,0:28:71.91:0,72,591	0/0:20,1:21:18.94:0,19,359	0/0:17,0:17:47.94:0,48,394	1/1:9,21:30:47.54:711,48,0	1/1:6,28:34:78.19:828,78,0	1/1:6,2:36:60.03:297,60,0	0/1:3,9:12:0.58:200,0,1
chr10	47241590	.	T	TA	4617.91	PASS	AB=0.550;AC=15;AF=0.268;AN=56;BaseQRankSum=-9.092;DP=601;FS=6.526;HRun=8;HaplotypeScore=58.5519;InbreedingCoeff=0.8888;MQ=81.92;MQ0=0;MQRankSum=-3.008;QD=26.39;ReadPosRankSum=1.398;VQSLOD=5.6514;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:86.97:0,87,788	0/0:11,1:12:1.40:0,1,267	0/0:24,0:24:26.88:0,27,427	0/0:9,0:9:21:0,21,192	1/1:10,12:22:21.70:454,22,0	0/0:23,0:23:32.42:0,32,461	0/0:28,0:28:80.98:0,81,732	0/0:20,0:20:50.95:0,51,449	0/0:19,0:19:48.01:0,48,439	1/1:4,15:21:50.93:538,51,0	0/1:2,8:11:6.40:172,0,6	0/0:22,0:22:57.02:0,57,521	0/0:20,0:20:57.02:0,57,522	0/0:28,0:28:80.99:0,81,726	0/0:24,0:24:60.01:0,60,549	0/0:15,0:15:42.01:0,42,381	1/1:0,31:31:81.24:934,81,0	1/1:2,23:25:57.17:658,57,0	0/0:19,0:19:51.01:0,51,462	0/0:13,0:13:33.01:0,33,301	0/0:20,0:20:44.99:0,45,406	0/0:25,0:25:65.89:0,66,584	0/0:18,0:18:39:0,39,353	0/0:32,0:32:83.99:0,84,760	1/1:0,13:15:32.93:361,33,0	1/1:3,28:31:84.22:947,84,0	0/0:18,0:18:48.02:0,48,439	1/1:2,17:19:48.14:554,48,0
chr10	47241666	.	C	CAACAAAACAA	29728.89	PASS	AB=1.000;AC=47;AF=0.839;AN=56;BaseQRankSum=-1.921;DP=702;FS=0.000;HRun=0;HaplotypeScore=200.7615;InbreedingCoeff=0.8040;MQ=60.95;MQ0=4;MQRankSum=-9.620;QD=51.79;ReadPosRankSum=-2.001;VQSLOD=4.2238;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:78.08:0,78,2149	1/1:5,2:7:6.02:298,6,0	0/1:37,0:23:23.35:23,0,51	0/0:37,0:24:11.76:0,12,223	1/1:14,12:27:45.12:1926,45,0	0/0:25,0:25:50.38:0,50,1378	0/0:26,0:27:48.16:0,48,1317	1/1:19,0:19:12.02:138,12,0	1/1:14,0:20:21.07:933,21,0	1/1:14,6:20:27.08:1130,27,0	1/1:11,14:26:57.10:2279,57,0	1/1:15,0:22:15.04:653,15,0	1/1:16,1:20:18.05:813,18,0	1/1:14,8:25:27.09:1337,27,0	1/1:19,12:33:48.16:2179,48,0	1/1:12,0:19:30.10:1263,30,0	1/1:22,5:28:39.06:1281,39,0	1/1:16,9:25:39.11:1703,39,0	1/1:15,7:22:31.86:959,32,0	1/1:15,12:28:45:1690,45,0	1/1:7,0:8:9.03:353,9,0	1/1:24,0:32:30:1032,30,0	1/1:18,0:24:30.10:1195,30,0	1/1:16,0:22:18.06:737,18,0	1/1:15,9:24:39.13:1696,39,0	1/1:23,13:36:78.26:3431,78,0	1/1:19,14:33:45.62:2115,46,0	1/1:14,2:16:15.02:564,15,0
chr10	47242092	.	TG	T	4541.07	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=8.343;DP=712;FS=6.737;HRun=1;HaplotypeScore=135.8695;InbreedingCoeff=0.9996;MQ=89.45;MQ0=0;MQRankSum=-1.888;QD=40.19;ReadPosRankSum=-0.575;VQSLOD=3.6898;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,105,1653	1/1:0,9:9:27.09:377,27,0	0/0:24,0:24:72.25:0,72,1148	0/0:29,0:29:87.28:0,87,1331	0/0:31,0:31:90.29:0,90,1411	1/1:0,28:28:81.27:1128,81,0	1/1:0,28:28:78.26:1090,78,0	1/1:0,24:24:69.22:948,69,0	0/0:21,0:21:63.21:0,63,1007	0/0:30,0:30:90.30:0,90,1415	0/0:18,0:18:51.17:0,51,813	0/0:29,0:29:87.27:0,87,1365	0/0:22,0:22:66.23:0,66,1055	0/0:26,0:26:78.27:0,78,1246	1/1:0,24:24:72.24:998,72,0	0/0:18,0:18:54.18:0,54,856	0/0:32,0:32:96.33:0,96,1520	0/0:28,0:28:84.21:0,84,1288	0/0:30,0:30:87.25:0,87,1320	0/0:26,0:26:75.23:0,75,1170	0/0:60,0:60:99:0,175,2782	0/0:21,0:21:63.21:0,63,1007	0/0:12,0:12:33.11:0,33,528	0/0:27,0:27:81.26:0,81,1271	0/0:18,0:18:54.18:0,54,863	0/0:24,0:24:72.25:0,72,1150	0/0:28,0:28:84.29:0,84,1340	0/0:10,0:10:30.10:0,30,480
chr10	47242546	.	C	CTCCA	13286.96	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-13.585;DP=838;FS=0.645;HRun=0;HaplotypeScore=125.9372;InbreedingCoeff=0.9999;MQ=84.84;MQ0=0;MQRankSum=-5.492;QD=66.43;ReadPosRankSum=2.279;VQSLOD=7.0295;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,126,2315	0/0:16,0:16:45.15:0,45,838	0/0:29,0:29:78.21:0,78,1350	0/0:25,0:25:63.21:0,63,1130	1/1:4,25:30:69.24:1838,69,0	0/0:25,0:25:75.24:0,75,1366	0/0:34,0:34:90.26:0,90,1564	0/0:42,0:42:99:0,108,1947	0/0:37,0:37:99:0,105,1950	1/1:5,26:31:81.28:2070,81,0	1/1:2,25:29:72.25:1917,72,0	0/0:46,0:46:99:0,135,2455	0/0:32,0:32:96.32:0,96,1732	0/0:31,0:31:90.31:0,90,1679	0/0:33,0:33:96.33:0,96,1784	0/0:27,0:27:69.24:0,69,1281	1/1:0,24:25:63.22:1679,63,0	1/1:1,12:14:33.11:873,33,0	0/0:21,0:21:60.20:0,60,1089	0/0:21,0:21:63.22:0,63,1176	0/0:52,0:52:99:0,141,2621	0/0:40,0:40:99:0,114,2107	0/0:21,0:21:60.21:0,60,1119	0/0:37,0:37:99:0,105,1928	1/1:3,17:20:51.11:1298,51,0	1/1:5,29:36:99:2493,99,0	0/0:25,0:24:72.23:0,72,1290	1/1:2,13:15:42.14:1119,42,0
chr10	47243602	.	C	CA	8595.03	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-3.382;DP=746;FS=5.789;HRun=0;HaplotypeScore=85.2241;InbreedingCoeff=0.9981;MQ=77.07;MQ0=0;MQRankSum=-0.681;QD=42.55;ReadPosRankSum=0.643;VQSLOD=5.2391;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:63,0:63:99:0,156,2407	0/0:13,0:13:36.12:0,36,503	0/0:13,0:14:16.99:0,17,516	0/0:17,0:17:36.04:0,36,423	1/1:0,21:21:48.14:767,48,0	0/0:30,0:30:90.26:0,90,1200	0/0:26,0:26:75.16:0,75,959	0/0:26,0:26:75.23:0,75,1004	0/0:23,0:23:69.23:0,69,960	1/1:0,35:34:99:1627,102,0	1/1:1,14:15:27.09:432,27,0	0/0:20,0:20:57.19:0,57,797	0/0:28,0:28:84.27:0,84,1155	0/0:24,0:24:69.23:0,69,952	0/0:33,0:33:99:0,99,1383	0/0:24,0:24:72.21:0,72,959	1/1:1,46:47:99:2014,126,0	1/1:1,18:19:50.55:786,51,0	0/0:16,0:16:48.15:0,48,653	0/0:36,0:36:99:0,105,1460	0/0:37,0:37:99:0,105,1447	0/0:20,0:20:56.83:0,57,706	0/0:25,0:25:69.23:0,69,963	0/0:26,0:26:78.17:0,78,1041	1/1:1,17:18:51.17:815,51,0	1/1:2,29:31:87.30:1388,87,0	0/0:43,0:42:99:0,126,1723	1/1:0,16:16:48.16:767,48,0
chr10	47245303	.	GGTGTGT	G	3073.12	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=0.087;DP=687;FS=18.756;HRun=0;HaplotypeScore=201.6767;InbreedingCoeff=0.8848;MQ=60.66;MQ0=8;MQRankSum=-6.915;QD=19.09;ReadPosRankSum=3.326;VQSLOD=2.0827;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:48:71.45:0,71,1960	0/0:8,0:8:3.01:0,3,38	0/0:30,0:21:8.06:0,8,92	0/0:30,0:18:12.04:0,12,263	0/0:18,0:18:5.30:0,5,109	0/0:20,0:17:15.04:0,15,248	0/0:31,0:29:14.78:0,15,258	0/0:32,0:30:62.88:0,63,1175	1/1:7,7:18:19.83:353,20,0	0/0:20,0:16:23.56:0,24,400	0/0:12,0:11:8.64:0,9,238	1/1:8,15:23:36.02:651,36,0	1/1:13,14:30:48.16:917,48,0	0/0:26,0:26:24.98:0,25,432	0/0:32,0:30:20.39:0,20,352	1/1:8,15:24:33.11:653,33,0	0/0:31,0:29:30.10:0,30,534	0/0:17,0:16:21.07:0,21,487	0/0:30,0:28:28.12:0,28,426	0/0:19,0:19:14.94:0,15,300	0/0:42,0:41:30.57:0,31,641	1/1:5,12:19:17.54:265,18,0	1/1:7,5:14:9.03:178,9,0	1/1:21,11:32:13.39:247,13,0	0/0:14,0:14:11.74:0,12,236	0/0:30,0:29:52.02:0,52,989	0/0:25,0:25:33.03:0,33,682	0/0:8,0:8:17.98:0,18,299
chr10	47245398	.	CT	C	7547.58	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=7.984;DP=562;FS=0.353;HRun=10;HaplotypeScore=73.7969;InbreedingCoeff=0.9849;MQ=73.74;MQ0=0;MQRankSum=-1.821;QD=21.56;ReadPosRankSum=-0.405;VQSLOD=5.4230;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:90.64:0,91,964	1/1:0,7:7:21:182,21,0	0/0:18,1:19:19.70:0,20,371	0/0:15,0:15:15.73:0,16,221	1/1:0,17:17:44.12:389,44,0	1/1:2,22:24:59.99:521,60,0	1/1:1,16:17:44.91:391,45,0	1/1:6,21:27:59.98:521,60,0	0/0:18,0:18:51.12:0,51,555	1/1:1,18:19:50.98:440,51,0	1/1:2,12:14:35.99:312,36,0	0/0:24,2:26:7.96:0,8,503	0/0:17,0:17:33.07:0,33,356	1/1:2,22:24:59.98:521,60,0	1/1:3,23:26:35.80:540,36,0	0/0:23,0:23:54.14:0,54,590	1/1:0,24:24:68.99:599,69,0	1/1:3,12:15:29.98:260,30,0	1/1:2,20:22:56.66:477,57,0	1/1:2,13:15:32.97:286,33,0	1/1:1,23:24:56.97:495,57,0	0/0:13,0:13:21.06:0,21,232	0/0:21,0:22:56.99:0,57,612	0/0:24,0:24:54.15:0,54,597	1/1:1,18:19:50.99:443,51,0	1/1:3,21:24:59.97:521,60,0	1/1:1,16:17:38.99:339,39,0	1/1:3,12:15:35.99:313,36,0
chr10	47245935	.	G	GA	1546.80	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-0.851;DP=477;FS=17.692;HRun=7;HaplotypeScore=85.5779;InbreedingCoeff=0.9614;MQ=72.51;MQ0=4;MQRankSum=-0.728;QD=26.22;ReadPosRankSum=1.145;VQSLOD=2.2866;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:18:45.01:0,45,434	0/0:10,0:10:27.04:0,27,260	0/0:34,0:21:11.69:0,12,312	0/0:30,0:15:20.67:0,21,231	0/0:24,0:24:72.12:0,72,695	0/0:18,0:18:54.09:0,54,521	0/0:9,0:9:24.04:0,24,232	0/0:24,0:24:57.08:0,57,550	0/0:12,0:12:27:0,27,260	0/0:26,0:26:69.09:0,69,659	0/0:30,0:30:75.11:0,75,724	0/0:4,0:4:9.01:0,9,87	0/0:8,0:8:24.04:0,24,232	1/1:1,4:5:9.03:109,9,0	0/0:21,0:21:51.07:0,51,487	0/0:16,0:16:36.04:0,36,342	0/0:18,0:18:51.07:0,51,487	0/0:13,0:13:33.05:0,33,319	1/1:3,10:14:32.97:377,33,0	1/1:0,18:18:48.07:548,48,0	1/1:1,7:8:21.06:253,21,0	0/0:11,0:11:33.05:0,33,319	0/0:18,0:18:45:0,45,424	0/0:15,0:15:26.13:0,26,259	0/0:18,0:18:41.97:0,42,404	0/0:25,0:25:69.09:0,69,661	1/1:2,12:14:35.93:431,36,0	0/0:15,0:15:45.07:0,45,435
chr10	47246464	.	T	TATCCC	12444.14	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-8.549;DP=469;FS=1.320;HRun=0;HaplotypeScore=125.5028;InbreedingCoeff=0.9849;MQ=94.39;MQ0=0;MQRankSum=-12.533;QD=68.00;ReadPosRankSum=6.312;VQSLOD=5.7863;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:66.17:0,66,1290	0/0:12,0:12:36.11:0,36,741	0/0:28,0:28:75.68:0,76,1473	0/0:28,0:27:72.06:0,72,1260	0/0:17,0:17:42.14:0,42,856	0/0:15,0:15:18.06:0,18,373	0/0:26,0:26:63.60:0,64,1186	0/0:13,0:13:33.08:0,33,575	1/1:3,21:25:63.22:1987,63,0	0/0:14,0:14:30.10:0,30,578	0/0:16,0:16:30.09:0,30,567	1/1:1,19:21:54.19:1647,54,0	1/1:2,11:13:39.13:1186,39,0	1/1:5,6:11:30.07:719,30,0	0/0:19,0:19:45.13:0,45,892	1/1:1,18:20:42.14:1323,42,0	0/0:20,0:19:45.11:0,45,879	0/0:20,0:21:48.12:0,48,984	1/1:3,6:9:21.07:635,21,0	1/1:4,7:12:24.08:726,24,0	1/1:3,6:9:18.06:548,18,0	1/1:4,6:10:17.99:491,18,0	1/1:1,10:13:18.06:568,18,0	1/1:5,10:15:19.67:719,20,0	0/0:11,0:11:21.07:0,21,429	0/0:18,0:18:45.14:0,45,877	1/1:6,19:25:66.20:1895,66,0	0/0:3,0:3:9.03:0,9,195
chr10	47246469	.	C	CA	352.51	PASS	AB=0.970;AC=11;AF=0.196;AN=56;BaseQRankSum=2.718;DP=489;FS=11.000;HRun=0;HaplotypeScore=152.2029;InbreedingCoeff=0.0095;MQ=85.45;MQ0=0;MQRankSum=-4.528;QD=2.27;ReadPosRankSum=-5.295;VQSLOD=0.3831;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:87.18:0,87,1080	0/0:12,0:12:36.10:0,36,484	0/0:26,0:25:48.72:0,49,903	0/0:23,0:22:55.88:0,56,707	0/0:18,0:18:42.13:0,42,586	0/0:14,0:13:24:0,24,277	0/0:27,0:27:57.74:0,58,752	0/0:16,0:16:42.09:0,42,497	0/1:25,0:25:20.92:21,0,81	0/0:17,0:17:38.64:0,39,510	0/0:15,0:15:36.07:0,36,425	0/0:20,0:20:3.18:0,3,33	0/1:18,0:18:60.46:105,0,60	1/1:8,2:10:10.09:172,10,0	0/0:18,0:18:41.97:0,42,587	0/0:16,0:16:21.67:0,22,68	0/0:22,0:21:51.08:0,51,666	0/0:21,0:21:51.14:0,51,691	0/1:11,1:12:25.24:25,0,101	0/1:15,0:15:13.93:40,0,14	0/1:9,2:11:34.25:51,0,34	0/1:11,0:11:25.18:25,0,42	0/1:13,0:13:0.87:1,0,5	0/1:16,0:16:16.88:50,0,17	0/0:11,0:11:23.91:0,24,307	0/0:18,0:18:36.51:0,37,545	0/1:23,1:24:7.25:7,0,118	0/0:4,0:4:12:0,12,146
chr10	47246480	.	A	ATTT	7559.91	PASS	AB=0.886;AC=47;AF=0.839;AN=56;BaseQRankSum=5.991;DP=537;FS=12.471;HRun=12;HaplotypeScore=171.5286;InbreedingCoeff=0.5015;MQ=63.69;MQ0=4;MQRankSum=-8.435;QD=16.15;ReadPosRankSum=-4.590;VQSLOD=0.4479;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:39:84.64:0,85,911	0/1:9,0:10:20.17:162,0,20	0/0:15,0:14:2.36:0,2,60	0/0:14,0:12:8.35:0,8,62	1/1:20,1:24:33.67:405,34,0	1/1:11,1:19:34.64:432,35,0	1/1:19,0:22:26.32:261,26,0	0/1:11,0:11:3.13:3,0,92	1/1:24,3:28:31.51:353,32,0	1/1:13,1:17:39.20:451,39,0	1/1:9,6:17:27.04:265,27,0	1/1:21,5:27:24.57:412,25,0	1/1:10,4:16:31.95:389,32,0	1/1:9,0:11:13.55:116,14,0	1/1:7,0:16:9.03:135,9,0	1/1:18,5:23:33.07:500,33,0	1/1:11,2:23:36.12:518,36,0	1/1:12,1:24:42.13:588,42,0	0/1:10,0:13:8.47:108,0,8	1/1:20,0:26:38.33:333,38,0	1/1:7,0:9:10.43:77,10,0	1/1:11,2:13:9.71:85,10,0	1/1:14,2:17:19.57:237,20,0	1/1:11,9:20:30.68:458,31,0	1/1:16,1:20:41.49:487,41,0	1/1:15,4:20:0.55:344,1,0	1/1:16,1:28:19.51:298,20,0	1/1:3,1:4:9.03:142,9,0
chr10	47246491	.	TTC	T	640.50	PASS	AB=0.984;AC=21;AF=0.375;AN=56;BaseQRankSum=-2.205;DP=524;FS=0.000;HRun=0;HaplotypeScore=141.7572;InbreedingCoeff=-0.5085;MQ=47.04;MQ0=5;MQRankSum=2.716;QD=1.68;ReadPosRankSum=-7.629;VQSLOD=-0.2832;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,112,1729	0/1:11,0:10:4.72:5,0,80	0/0:6,0:4:0.15:0,0,94	0/0:8,0:6:8.63:0,9,82	0/1:22,0:22:15.11:15,0,153	0/0:18,0:17:12.69:0,13,179	0/1:20,0:18:8.81:9,0,135	0/1:16,0:16:41.03:41,0,122	0/1:26,0:26:71.94:72,0,199	0/0:20,0:18:17.66:0,18,223	0/1:16,0:15:69.07:69,0,79	0/1:28,0:28:71.04:71,0,264	0/1:18,0:18:34.81:35,0,146	0/1:11,3:13:49.71:50,0,87	0/1:17,0:17:2.95:3,0,98	0/1:23,0:23:25.75:26,0,243	0/1:26,0:25:87.80:88,0,116	0/0:21,0:21:5.18:0,5,165	0/1:16,1:17:81.54:82,0,93	0/1:24,2:26:25.59:26,0,199	1/1:8,0:7:0.24:33,0,0	0/1:10,0:10:25.08:25,0,97	0/1:19,0:19:15.33:15,0,137	0/1:24,0:24:51.52:76,0,52	0/1:22,0:21:37.28:37,0,176	0/1:19,0:19:14.82:15,0,226	0/0:26,0:26:28.60:0,29,233	0/0:4,0:4:9.79:0,10,55
chr10	47246534	.	T	TA	2690.40	PASS	AC=10;AF=0.185;AN=54;BaseQRankSum=-6.054;DP=465;FS=3.015;HRun=2;HaplotypeScore=84.7091;InbreedingCoeff=0.9377;MQ=52.24;MQ0=5;MQRankSum=0.913;QD=30.57;ReadPosRankSum=0.538;VQSLOD=3.2846;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:90.28:0,90,1115	0/0:12,0:12:36.11:0,36,443	./.	0/0:4,0:3:4.78:0,5,25	0/0:19,0:19:45.14:0,45,552	0/0:10,0:10:21.07:0,21,260	0/0:27,0:25:75.24:0,75,928	0/0:18,0:18:39.06:0,39,442	0/0:24,0:23:63.20:0,63,780	0/0:19,0:19:57.18:0,57,702	0/0:15,0:14:39.12:0,39,482	0/0:24,0:24:63.19:0,63,774	0/0:12,0:12:33.10:0,33,409	1/1:0,9:8:12.04:173,12,0	0/0:16,0:16:45.14:0,45,558	0/0:17,0:17:45.14:0,45,557	0/0:27,0:26:63.20:0,63,776	0/0:17,0:17:39.08:0,39,463	1/1:2,17:18:51.17:725,51,0	1/1:1,21:22:54.14:754,54,0	1/1:1,10:10:24.08:346,24,0	0/0:12,0:12:33.10:0,33,409	0/0:12,0:12:27.07:0,27,319	0/0:18,0:18:39.12:0,39,483	0/0:18,0:18:45.14:0,45,557	0/0:17,0:17:48.15:0,48,595	1/1:2,25:27:60.20:864,60,0	0/0:7,0:7:6.02:0,6,74
chr10	47247409	.	TGCCC	T	96.88	PASS	AB=0.721;AC=2;AF=0.067;AN=30;BaseQRankSum=3.464;DP=103;FS=2.570;HRun=0;HaplotypeScore=27.0807;InbreedingCoeff=-0.1044;MQ=37.70;MQ0=12;MQRankSum=-2.283;QD=8.07;ReadPosRankSum=2.659;VQSLOD=1.3523;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:2,0:2:0.47:0,0,1	./.	0/0:5,0:1:3.01:0,3,31	0/0:2,0:1:3:0,3,27	./.	./.	0/0:10,0:6:6.02:0,6,128	0/0:1,0:1:3.01:0,3,44	0/0:1,0:1:3.01:0,3,49	./.	./.	0/0:7,0:7:12.03:0,12,153	0/0:2,0:2:6.02:0,6,88	0/0:4,0:4:6:0,6,89	./.	./.	0/1:5,4:8:95.46:137,0,95	0/1:2,1:3:37.80:40,0,38	0/0:7,0:3:9.03:0,9,130	./.	0/0:26,3:19:8.83:0,9,216	./.	./.	0/0:8,0:3:3.01:0,3,85	./.	0/0:2,0:2:6.02:0,6,88	./.	./.
chr10	47247481	.	C	CT	154.78	PASS	AB=0.917;AC=12;AF=0.429;AN=28;BaseQRankSum=1.246;DP=82;FS=0.000;HRun=0;HaplotypeScore=29.1602;InbreedingCoeff=0.2405;MQ=46.33;MQ0=13;MQRankSum=-1.142;QD=3.10;ReadPosRankSum=2.335;VQSLOD=1.9938;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:2,0:2:3.87:0,4,24	0/0:4,0:1:2.96:0,3,19	./.	./.	1/1:5,1:2:6:53,6,0	./.	1/1:0,1:1:3:26,3,0	./.	./.	1/1:2,2:3:6.01:55,6,0	0/1:4,1:3:15.08:26,0,15	0/0:8,0:4:9.03:0,9,126	./.	./.	1/1:1,2:2:6.01:56,6,0	0/1:7,0:3:19.31:19,0,75	./.	./.	1/1:19,5:15:0.59:25,1,0	0/0:2,0:1:2.98:0,3,21	0/0:2,0:1:0.47:0,0,1	./.	./.	0/0:2,0:2:6.02:0,6,83	0/0:2,0:1:3.01:0,3,42	./.
chr10	47247484	.	TGCCC	T	251.64	PASS	AB=0.815;AC=13;AF=0.406;AN=32;BaseQRankSum=1.045;DP=77;FS=3.080;HRun=0;HaplotypeScore=30.1142;InbreedingCoeff=0.2353;MQ=56.21;MQ0=10;MQRankSum=-1.834;QD=5.14;ReadPosRankSum=1.509;VQSLOD=1.0374;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:1,0:1:3.01:0,3,44	./.	0/0:3,0:2:2.94:0,3,43	0/0:4,0:2:5.91:0,6,38	./.	./.	1/1:4,1:2:6.02:68,6,0	./.	1/1:0,1:1:3.01:34,3,0	./.	./.	1/1:2,2:3:6.02:77,6,0	0/1:4,1:3:20.92:29,0,21	0/0:7,0:4:9.03:0,9,132	./.	./.	1/1:1,2:2:6.02:86,6,0	0/1:4,0:3:34.18:34,0,142	./.	./.	0/1:15,4:14:2.22:30,0,2	0/0:2,0:1:3.01:0,3,46	0/0:2,0:1:0:0,0,0	1/1:3,2:2:1.97:6,2,0	./.	0/0:2,0:2:6.02:0,6,104	0/0:1,0:1:3.01:0,3,43	./.
chr10	47247536	.	G	GCCT	1070.53	PASS	AB=0.771;AC=13;AF=0.260;AN=50;BaseQRankSum=-1.736;DP=143;FS=5.507;HRun=0;HaplotypeScore=37.0655;InbreedingCoeff=0.1799;MQ=76.44;MQ0=3;MQRankSum=-3.959;QD=18.78;ReadPosRankSum=-0.506;VQSLOD=1.9568;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:7:18.06:0,18,278	0/0:1,0:1:3.01:0,3,49	0/0:11,0:9:19.19:0,19,160	0/1:13,0:12:37.04:37,0,225	./.	0/0:1,0:1:3.01:0,3,49	0/0:9,0:9:21.07:0,21,338	0/0:3,0:3:9.03:0,9,147	0/0:3,0:3:9.03:0,9,147	0/1:3,2:5:5.09:190,0,5	0/0:1,1:2:0:0,0,0	0/0:8,0:8:18.04:0,18,268	0/0:4,0:4:9.03:0,9,142	1/1:0,7:7:21.07:466,21,0	0/0:4,0:4:12.04:0,12,196	0/0:2,0:2:6.02:0,6,98	0/1:8,2:10:99:182,0,129	0/1:4,4:7:57.94:58,0,79	0/1:4,0:4:25.74:26,0,122	0/1:0,1:1:0:0,0,0	0/0:14,6:19:8.57:0,9,110	./.	0/0:1,0:1:3.01:0,3,42	0/0:8,0:7:15.04:0,15,235	1/1:1,3:4:6.02:125,6,0	0/1:2,1:3:34:61,0,34	1/1:0,1:1:3.01:67,3,0	./.
chr10	47247621	.	TCCCTGC	T	2503.16	PASS	AC=10;AF=0.192;AN=52;BaseQRankSum=-1.989;DP=433;FS=36.594;HRun=0;HaplotypeScore=109.4978;InbreedingCoeff=0.8763;MQ=65.47;MQ0=1;MQRankSum=-9.354;QD=29.45;ReadPosRankSum=3.495;VQSLOD=1.5439;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:30.10:0,30,905	0/0:4,0:4:12:0,12,320	0/0:14,0:14:3.32:0,3,297	0/0:6,0:6:6.02:0,6,149	0/0:5,0:5:9.03:0,9,236	0/0:10,0:10:27.05:0,27,819	0/0:29,0:29:75.26:0,75,2472	0/0:5,0:5:9.02:0,9,224	1/1:1,17:18:45.15:932,45,0	0/0:17,0:16:36.11:0,36,884	0/0:8,0:8:21.07:0,21,549	1/1:4,15:18:21.07:422,21,0	1/1:2,7:9:18.06:383,18,0	0/0:17,0:16:36.07:0,36,893	0/0:12,0:12:24.08:0,24,765	1/1:2,12:13:27.09:550,27,0	0/0:44,0:44:91.18:0,91,2231	0/0:28,0:28:72.24:0,72,1757	0/0:13,0:13:21.49:0,21,394	0/0:13,0:13:31.35:0,31,758	0/0:63,0:61:99:0,110,2538	./.	./.	1/1:3,22:24:18.06:383,18,0	0/0:10,0:10:20.94:0,21,484	0/0:11,0:11:30.10:0,30,671	0/0:14,0:14:36.54:0,37,880	0/0:2,0:2:6.02:0,6,159
chr10	47248850	.	AC	A	6352.64	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=14.595;DP=748;FS=13.495;HRun=3;HaplotypeScore=102.2566;InbreedingCoeff=0.9992;MQ=80.29;MQ0=0;MQRankSum=0.306;QD=32.41;ReadPosRankSum=3.052;VQSLOD=3.7315;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,165,2295	0/0:13,0:13:39.13:0,39,561	0/0:26,0:26:69.05:0,69,942	0/0:13,0:13:39.09:0,39,511	0/0:30,0:30:87.29:0,87,1251	0/0:28,0:28:78.26:0,78,1123	0/0:32,0:32:93.31:0,93,1336	0/0:36,0:36:99:0,102,1467	1/1:0,27:27:78.24:935,78,0	0/0:29,0:29:84.28:0,84,1190	0/0:20,0:20:57.19:0,57,820	1/1:3,28:31:90.24:1063,90,0	1/1:1,21:22:57.17:683,57,0	0/0:27,0:27:75.23:0,75,1036	0/0:23,0:23:57.19:0,57,820	1/1:2,26:28:72.22:864,72,0	0/0:29,0:29:84.23:0,84,1160	0/0:21,0:21:54.15:0,54,755	0/0:22,0:22:63.21:0,63,897	0/0:24,0:24:60.19:0,60,845	0/0:26,0:26:66.22:0,66,950	1/1:1,30:31:90.28:1080,90,0	1/1:0,24:24:60.18:720,60,0	1/1:2,31:33:84.26:1008,84,0	0/0:21,0:21:60.20:0,60,862	0/0:32,0:32:93.30:0,93,1318	0/0:38,0:37:99:0,99,1405	0/0:7,0:7:21.07:0,21,302
chr10	47248923	.	ACTGT	A	15783	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=7.461;DP=677;FS=1.332;HRun=0;HaplotypeScore=136.9806;InbreedingCoeff=0.9852;MQ=88.11;MQ0=0;MQRankSum=-5.144;QD=43.24;ReadPosRankSum=3.952;VQSLOD=5.5001;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,135,3470	1/1:0,11:11:27.09:500,27,0	0/0:24,0:24:60.15:0,60,1334	0/0:28,0:28:62.58:0,63,1419	1/1:0,28:28:63.22:1166,63,0	0/0:23,0:23:60.21:0,60,1563	0/0:25,0:25:75.23:0,75,1852	1/1:2,18:20:54.17:977,54,0	0/0:26,0:26:75.24:0,75,1876	1/1:1,23:24:69.19:1179,69,0	1/1:1,15:16:30.10:555,30,0	0/0:27,0:27:78.27:0,78,2034	0/0:19,0:19:57.15:0,57,1354	1/1:0,20:20:41.32:777,41,0	1/1:1,25:26:63.22:1172,63,0	0/0:20,0:20:54.19:0,54,1440	1/1:1,26:27:66.23:1231,66,0	1/1:0,19:19:47.81:893,48,0	1/1:3,19:22:57.16:988,57,0	1/1:0,27:27:63.22:1168,63,0	1/1:2,46:48:93.16:1720,93,0	0/0:23,0:23:66.20:0,66,1671	0/0:25,0:25:75.26:0,75,1910	0/0:25,0:25:69.24:0,69,1785	1/1:1,14:15:36.12:669,36,0	1/1:0,28:28:84.25:1503,84,0	1/1:3,29:32:63.13:1173,63,0	1/1:0,2:2:6.02:112,6,0
chr10	47249300	.	GT	G	19323.32	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=9.076;DP=744;FS=3.349;HRun=3;HaplotypeScore=77.4502;InbreedingCoeff=0.9999;MQ=90.42;MQ0=0;MQRankSum=-7.817;QD=33.14;ReadPosRankSum=5.418;VQSLOD=5.1134;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,141,1963	1/1:0,15:15:45.14:557,45,0	0/0:25,0:24:72.23:0,72,992	0/0:35,0:35:93.22:0,93,1236	1/1:1,24:25:66.21:817,66,0	0/0:22,0:22:63.15:0,63,850	0/0:30,0:30:90.29:0,90,1276	1/1:1,26:27:78.21:931,78,0	1/1:1,17:18:45.14:557,45,0	1/1:2,26:28:75.24:927,75,0	1/1:1,14:15:33.10:408,33,0	1/1:1,24:25:69.22:852,69,0	1/1:0,17:17:48.15:594,48,0	1/1:1,22:23:63.16:763,63,0	1/1:1,34:35:96.19:1168,96,0	1/1:0,25:25:69.22:855,69,0	1/1:1,35:36:99:1226,99,0	1/1:1,14:15:42.13:520,42,0	1/1:0,19:19:52.37:618,52,0	1/1:1,28:29:84.26:1039,84,0	1/1:2,46:48:99:1449,117,0	1/1:1,18:19:51.09:631,51,0	1/1:0,25:25:62.57:780,63,0	1/1:2,32:34:87.27:1077,87,0	1/1:1,19:20:48.15:595,48,0	1/1:4,33:37:99:1250,102,0	1/1:0,33:33:93.29:1151,93,0	1/1:0,15:15:45.14:557,45,0
chr10	47250202	.	GGTGTGTGTGTGTGTGTGT	G	2895.63	PASS	AB=0.882;AC=13;AF=0.241;AN=54;BaseQRankSum=4.598;DP=612;FS=13.348;HRun=0;HaplotypeScore=231.1970;InbreedingCoeff=0.8012;MQ=60.92;MQ0=22;MQRankSum=-3.554;QD=27.06;ReadPosRankSum=1.690;VQSLOD=1.2713;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:25:15.05:0,15,786	0/0:5,0:5:8.99:0,9,419	0/0:49,0:19:3.01:0,3,59	0/0:54,0:22:9.30:0,9,114	1/1:7,0:8:6.02:197,6,0	0/0:22,0:21:23.95:0,24,1343	0/0:18,0:21:30.10:0,30,1461	0/0:24,0:24:31.89:0,32,759	0/0:13,0:16:21.07:0,21,1162	1/1:13,8:21:15.03:394,15,0	1/1:1,6:7:12.04:473,12,0	0/0:21,0:26:26.63:0,27,1813	0/0:17,0:20:21.54:0,22,1249	0/0:14,0:13:12.04:0,12,888	0/0:14,0:12:24.08:0,24,1766	0/0:29,0:29:21.07:0,21,1518	1/1:12,9:22:9.03:269,9,0	0/1:13,2:14:1.89:478,0,2	0/0:17,0:17:9.03:0,9,392	0/0:5,0:7:9.03:0,9,626	0/0:43,0:46:54.19:0,54,3322	0/0:21,0:25:24.08:0,24,1041	0/0:11,0:15:21.07:0,21,1343	0/0:41,0:40:21.07:0,21,1491	1/1:2,7:10:9.03:417,9,0	1/1:11,11:24:21.96:840,22,0	0/0:17,0:20:36.10:0,36,2422	./.
chr10	47250211	.	G	GTGTGTA	3034.22	PASS	AB=0.560;AC=13;AF=0.232;AN=56;BaseQRankSum=-0.289;DP=613;FS=3.028;HRun=0;HaplotypeScore=129.5326;InbreedingCoeff=0.7804;MQ=50.37;MQ0=25;MQRankSum=0.044;QD=16.67;ReadPosRankSum=2.777;VQSLOD=2.6485;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:29:48.29:0,48,378	0/0:7,0:7:17.88:0,18,159	0/0:47,0:16:17.13:0,17,201	0/0:45,0:13:20.55:0,21,192	0/0:7,0:7:5.49:0,5,68	0/0:25,0:23:41.70:0,42,326	0/0:29,0:28:51.12:0,51,463	0/0:24,0:24:64.13:0,64,518	1/1:17,1:17:0.70:330,1,0	0/0:20,0:19:38.79:0,39,344	0/0:8,0:7:11.95:0,12,152	1/1:22,3:24:47.54:695,48,0	1/1:16,3:18:30.68:361,31,0	0/0:11,0:10:21.01:0,21,281	0/0:17,0:15:41.99:0,42,513	1/1:5,26:33:7.53:613,8,0	0/0:19,0:19:17.82:0,18,166	0/0:14,0:13:29.10:0,29,268	0/0:11,0:11:26.84:0,27,256	0/0:8,0:8:20.56:0,21,146	0/0:54,0:53:99:0,108,1146	1/1:24,1:24:24.34:375,24,0	1/1:13,2:14:29.85:487,30,0	0/1:10,35:46:19.75:350,0,20	0/0:9,0:9:9.03:0,9,135	0/0:23,0:23:45.74:0,46,462	0/0:17,0:17:44.95:0,45,662	0/0:4,0:3:8.94:0,9,65
chr10	47250213	.	G	GTGTA	2371.16	PASS	AB=0.969;AC=11;AF=0.196;AN=56;BaseQRankSum=2.825;DP=601;FS=0.000;HRun=0;HaplotypeScore=114.4034;InbreedingCoeff=0.5568;MQ=48.48;MQ0=26;MQRankSum=-0.100;QD=13.32;ReadPosRankSum=4.460;VQSLOD=3.0065;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:28:48.77:0,49,387	0/0:7,0:7:17.86:0,18,156	0/0:43,0:12:17.13:0,17,201	0/0:45,0:12:19.91:0,20,191	0/0:6,0:6:5.58:0,6,54	0/0:26,0:24:42.32:0,42,337	0/0:28,0:28:50.36:0,50,444	0/0:24,0:24:68.69:0,69,555	0/1:19,0:18:57.04:260,0,57	0/0:20,0:19:38.78:0,39,317	0/0:8,0:7:11.95:0,12,110	0/1:24,2:25:10.86:540,0,11	1/1:19,0:18:31.21:308,31,0	0/0:11,0:10:21.01:0,21,247	0/0:16,0:14:41.99:0,42,469	1/1:30,0:30:1.48:355,1,0	0/0:18,0:18:17.81:0,18,138	0/0:14,0:12:30.76:0,31,244	0/0:11,0:11:26.84:0,27,244	0/0:8,0:8:18.33:0,18,135	0/0:53,0:52:99:0,108,1088	1/1:25,0:24:11.80:337,12,0	1/1:14,1:14:24.78:411,25,0	0/1:43,1:43:16.43:321,0,16	0/0:9,0:9:9.02:0,9,93	0/0:23,0:23:46.09:0,46,393	0/0:17,0:17:44.94:0,45,568	0/0:4,0:3:8.94:0,9,65
chr10	47252702	.	A	AT	6896.73	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-7.669;DP=615;FS=2.876;HRun=2;HaplotypeScore=64.1223;InbreedingCoeff=0.9996;MQ=84.11;MQ0=0;MQRankSum=-1.644;QD=38.32;ReadPosRankSum=1.377;VQSLOD=5.5698;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:69.22:0,69,855	0/0:13,0:13:33.10:0,33,409	0/0:24,0:24:61.85:0,62,701	0/0:14,0:14:35.54:0,36,467	1/1:3,29:32:84.19:1162,84,0	0/0:23,0:23:60.19:0,60,743	0/0:36,0:36:93.29:0,93,1152	0/0:31,0:31:84.26:0,84,1030	0/0:20,0:20:57.12:0,57,655	1/1:0,20:20:60.17:835,60,0	1/1:0,25:25:69.19:970,69,0	0/0:19,0:19:45.14:0,45,558	0/0:15,0:15:42.13:0,42,520	0/0:17,0:17:48.15:0,48,594	0/0:22,0:22:63.18:0,63,767	0/0:18,0:18:45.14:0,45,558	1/1:1,19:20:48.16:691,48,0	1/1:0,24:24:69.16:967,69,0	0/0:23,0:23:66.21:0,66,818	0/0:20,0:20:57.15:0,57,690	0/0:28,0:28:78.24:0,78,966	0/0:18,0:18:54.15:0,54,656	0/0:29,0:29:84.20:0,84,986	0/0:16,0:16:48.10:0,48,564	1/1:1,22:23:63.21:906,63,0	1/1:1,25:26:75.24:1059,75,0	0/0:24,0:24:48.15:0,48,593	1/1:3,6:9:24.04:306,24,0
chr10	47252770	.	TTATC	T	4766.13	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=2.044;DP=592;FS=8.158;HRun=0;HaplotypeScore=147.4387;InbreedingCoeff=0.9605;MQ=68.56;MQ0=4;MQRankSum=1.780;QD=26.48;ReadPosRankSum=4.116;VQSLOD=4.2326;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:33.07:0,33,692	0/0:17,0:17:17.93:0,18,206	0/0:25,0:23:46.81:0,47,495	0/0:23,0:21:29.26:0,29,292	1/1:18,8:26:65.96:788,66,0	0/0:3,0:24:30.10:0,30,542	0/0:6,0:14:12.04:0,12,225	0/0:38,0:37:65.83:0,66,551	0/0:21,0:21:51.04:0,51,739	1/1:15,2:17:33.05:408,33,0	1/1:16,7:23:44.99:508,45,0	0/0:19,0:19:36.01:0,36,492	0/0:15,0:15:38.93:0,39,491	0/0:13,0:13:12.01:0,12,180	0/0:15,0:15:17.95:0,18,191	0/0:5,0:14:15.05:0,15,278	1/1:7,5:12:24.02:322,24,0	1/1:14,5:19:27.01:333,27,0	0/0:13,0:26:59.59:0,60,598	0/0:16,0:27:12.03:0,12,199	0/0:10,0:10:5.99:0,6,49	0/0:20,0:20:48.07:0,48,812	0/0:29,0:29:71.79:0,72,1077	0/0:13,0:13:30.03:0,30,511	1/1:23,9:32:77.76:859,78,0	1/1:26,6:32:69.07:774,69,0	0/0:9,0:30:21:0,21,366	1/1:4,15:19:51.11:775,51,0
chr10	47252788	.	A	ATCTATCTATCTGTCTG	3768.21	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=-7.951;DP=588;FS=8.910;HRun=0;HaplotypeScore=284.0604;InbreedingCoeff=0.4053;MQ=60.17;MQ0=4;MQRankSum=-1.551;QD=21.91;ReadPosRankSum=-2.310;VQSLOD=0.4684;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:39.12:0,39,1088	1/1:2,11:17:12.04:535,12,0	0/0:23,0:21:53.94:0,54,818	0/0:20,0:17:25.57:0,26,390	0/0:28,0:28:66.20:0,66,1380	0/0:30,0:30:52.42:0,52,759	0/0:24,0:24:42.04:0,42,609	1/1:37,0:36:52.67:731,53,0	0/0:22,0:22:26.76:0,27,848	0/0:17,0:18:48.13:0,48,935	0/0:21,0:21:45.14:0,45,1027	0/0:15,0:15:16.23:0,16,430	0/0:17,0:17:16.24:0,16,512	0/1:9,0:9:14.98:15,0,66	1/1:15,0:15:30.09:436,30,0	0/0:14,0:12:18.05:0,18,229	0/0:14,0:14:24.64:0,25,808	0/0:16,0:16:36.08:0,36,782	0/1:23,0:23:99:566,0,222	0/1:26,0:26:99:171,0,236	0/0:14,0:14:15.94:0,16,227	0/1:21,0:21:13.97:14,0,1019	0/0:28,0:28:4.86:0,5,957	0/0:18,0:18:27.28:0,27,733	0/0:30,0:30:75.26:0,75,1811	0/0:30,0:30:75.20:0,75,1506	0/1:24,0:24:99:1299,0,182	0/0:17,0:17:51.13:0,51,1700
chr10	47252908	.	AACACACACACACAC	A	1254.91	PASS	AB=0.899;AC=17;AF=0.315;AN=54;BaseQRankSum=3.250;DP=472;FS=6.406;HRun=0;HaplotypeScore=161.1462;InbreedingCoeff=0.3955;MQ=71.26;MQ0=12;MQRankSum=-0.521;QD=6.93;ReadPosRankSum=0.586;VQSLOD=2.3218;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:22:15.05:0,15,591	0/0:7,0:7:3.01:0,3,36	1/1:42,0:22:2.68:11,3,0	./.	1/1:17,4:20:11.28:250,11,0	0/0:12,0:16:9.03:0,9,166	0/0:22,0:27:14.98:0,15,195	0/0:26,0:25:12:0,12,227	0/0:9,0:9:6.49:0,6,210	1/1:15,2:18:5.99:120,6,0	1/1:7,1:8:2.97:20,3,0	0/1:15,0:16:30.59:31,0,1187	0/0:11,0:12:24.08:0,24,1279	0/0:6,0:8:2.98:0,3,22	0/0:10,0:13:15.05:0,15,344	0/0:11,0:12:9.01:0,9,289	0/1:16,1:17:40.01:111,0,40	0/0:18,0:18:1.25:0,1,3	0/0:11,0:11:2.13:0,2,5	0/1:10,0:13:36.15:52,0,36	0/0:17,0:17:0.14:0,0,52	0/0:9,0:11:2.97:0,3,66	0/0:8,0:13:6.49:0,6,327	0/0:11,0:19:15.05:0,15,690	1/1:6,3:9:3.01:115,3,0	1/1:18,6:24:15.02:374,15,0	0/0:8,0:8:2.74:0,3,12	1/1:12,0:12:21:333,21,0
chr10	47253425	.	G	GAA	3173.14	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-10.131;DP=573;FS=3.025;HRun=3;HaplotypeScore=66.8197;InbreedingCoeff=0.9961;MQ=77.31;MQ0=0;MQRankSum=-1.246;QD=48.08;ReadPosRankSum=-2.405;VQSLOD=2.5060;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:90.23:0,90,1201	1/1:2,13:15:36.12:660,36,0	0/0:18,0:18:42.13:0,42,572	0/0:10,0:10:23.74:0,24,291	0/0:20,0:20:57.16:0,57,761	0/0:19,0:19:54.18:0,54,756	0/0:23,0:23:63.21:0,63,878	1/1:1,31:33:96.30:1681,96,0	0/0:17,0:16:48.15:0,48,652	0/0:20,0:20:48.16:0,48,670	0/0:15,0:15:45.15:0,45,624	0/0:26,0:26:75.24:0,75,1033	0/0:18,0:18:48.16:0,48,672	0/0:16,0:16:42.14:0,42,588	1/1:0,18:18:54.18:975,54,0	0/0:15,0:15:42.14:0,42,588	0/0:29,0:29:75.02:0,75,980	0/0:27,0:27:75.25:0,75,1050	0/0:18,0:18:48.15:0,48,655	0/0:20,0:20:60.20:0,60,840	0/0:41,0:41:99:0,117,1598	0/0:12,0:12:33.11:0,33,461	0/0:13,0:13:36.11:0,36,487	0/0:21,0:21:51.17:0,51,708	0/0:19,0:19:51.17:0,51,713	0/0:27,0:27:78.26:0,78,1092	0/0:19,0:19:57.19:0,57,798	0/0:9,0:9:18.06:0,18,252
chr10	47253576	.	G	GA	922.68	PASS	AB=0.941;AC=6;AF=0.107;AN=56;BaseQRankSum=-1.775;DP=573;FS=9.366;HRun=10;HaplotypeScore=76.3408;InbreedingCoeff=0.5896;MQ=57.85;MQ0=17;MQRankSum=-3.166;QD=13.37;ReadPosRankSum=-0.709;VQSLOD=2.7751;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:45:99:0,103,817	0/0:14,1:14:3.95:0,4,238	0/0:8,0:5:11.78:0,12,82	0/1:7,0:5:8.63:9,0,19	0/0:26,0:24:56.85:0,57,460	1/1:6,15:21:29.28:482,29,0	1/1:11,14:25:56.96:541,57,0	0/0:28,0:28:68.44:0,68,548	0/0:16,0:15:29.95:0,30,246	0/0:21,0:22:64.84:0,65,512	0/0:23,1:23:30.98:0,31,460	0/0:24,0:23:38.87:0,39,314	0/0:19,0:18:36.28:0,36,331	0/0:7,0:7:14.98:0,15,123	0/0:15,0:16:29:0,29,227	0/0:10,0:9:20.52:0,21,149	0/0:36,0:31:79.93:0,80,646	0/0:35,0:32:54.57:0,55,542	0/0:20,0:21:49.97:0,50,398	0/0:21,0:21:44.85:0,45,358	0/1:13,2:14:24.91:25,0,230	0/0:21,0:20:50.93:0,51,418	0/0:16,0:16:38.96:0,39,325	0/0:22,0:18:32.95:0,33,271	0/0:23,0:23:56.89:0,57,461	0/0:19,0:18:20.73:0,21,316	0/0:22,0:21:59.92:0,60,491	0/0:7,0:7:14.95:0,15,122
chr10	47253622	.	GA	G	5208.44	PASS	AB=0.757;AC=49;AF=0.875;AN=56;BaseQRankSum=2.761;DP=556;FS=0.614;HRun=12;HaplotypeScore=77.9206;InbreedingCoeff=0.4872;MQ=65.14;MQ0=0;MQRankSum=0.088;QD=10.31;ReadPosRankSum=2.382;VQSLOD=4.4438;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:34:74.62:0,75,695	1/1:2,0:8:9.95:29,10,0	0/0:17,0:13:15.29:0,15,141	0/1:4,0:4:16.04:17,0,16	0/1:9,16:26:27.43:271,0,27	1/1:4,0:16:26.25:76,26,0	1/1:6,0:30:42.11:122,42,0	1/1:8,0:25:34.39:99,34,0	1/1:3,1:13:19.26:70,19,0	1/1:7,15:23:25.69:346,26,0	1/1:8,20:29:25.33:370,25,0	1/1:3,0:22:21.47:66,21,0	1/1:4,0:19:28.29:82,28,0	1/1:2,6:8:23.90:183,24,0	1/1:2,0:17:28.51:82,29,0	1/1:0,0:16:28.52:82,29,0	1/1:10,22:29:44.26:526,44,0	1/1:6,18:24:22.78:363,23,0	0/1:8,8:16:26.07:175,0,26	1/1:9,16:25:16.61:294,17,0	1/1:1,12:13:32.85:255,33,0	1/1:2,0:20:28.51:82,29,0	1/1:6,0:16:24.18:71,24,0	1/1:2,0:17:24.43:70,24,0	1/1:2,14:16:11.40:271,11,0	1/1:4,15:19:39.29:321,39,0	1/1:5,26:33:23.88:531,24,0	1/1:0,17:18:46.87:354,47,0
chr10	47253986	.	T	TAA	3054.16	PASS	AB=0.877;AC=17;AF=0.304;AN=56;BaseQRankSum=0.018;DP=601;FS=4.509;HRun=14;HaplotypeScore=105.9650;InbreedingCoeff=0.7494;MQ=68.50;MQ0=1;MQRankSum=0.531;QD=13.28;ReadPosRankSum=-5.128;VQSLOD=1.4907;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:34:25.60:0,26,329	0/0:2,0:6:9.10:0,9,37	0/1:16,0:14:1.14:1,0,14	0/0:10,0:8:8.94:0,9,74	1/1:7,15:28:55.01:551,55,0	0/1:16,0:17:18.61:19,0,158	0/0:18,0:19:32.57:0,33,307	0/0:13,0:30:42.65:0,43,194	0/0:22,0:24:50.10:0,50,394	1/1:6,14:24:49.23:520,49,0	1/1:8,20:34:64.34:629,64,0	0/0:20,0:20:26.47:0,26,218	0/0:19,0:19:35.76:0,36,298	0/0:19,0:20:23.60:0,24,238	0/0:8,0:21:30.18:0,30,142	0/0:16,0:18:32.52:0,33,262	1/1:7,15:25:24.92:402,25,0	1/1:3,12:17:20.43:244,20,0	0/0:14,0:14:17.65:0,18,150	0/0:21,0:27:40.32:0,40,294	0/0:15,0:16:17.39:0,17,137	0/0:21,0:21:23.26:0,23,187	0/0:18,0:19:21.14:0,21,196	0/0:13,0:15:32.67:0,33,262	0/1:10,12:24:26.16:146,0,26	1/1:8,15:31:60.13:621,60,0	0/0:34,0:37:28.13:0,28,467	1/1:2,11:13:9.03:118,9,0
chr10	47255550	.	CTTTTTT	C	4481.91	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=17.006;DP=652;FS=11.358;HRun=6;HaplotypeScore=188.8262;InbreedingCoeff=0.9979;MQ=82.92;MQ0=0;MQRankSum=-15.941;QD=32.24;ReadPosRankSum=0.170;VQSLOD=0.7503;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,117,4243	0/0:14,0:14:42.14:0,42,1569	0/0:30,0:29:84.28:0,84,2847	0/0:32,0:32:91.46:0,91,2940	1/1:2,16:25:39.83:323,40,0	0/0:30,0:31:93.32:0,93,3354	0/0:26,0:26:78.24:0,78,2720	0/0:28,0:28:81.28:0,81,2964	0/0:24,0:24:72.25:0,72,2679	1/1:1,19:26:63.47:1096,63,0	1/1:1,14:20:51.67:581,52,0	0/0:23,0:23:69.22:0,69,2390	0/0:23,0:23:69.24:0,69,2504	0/0:24,0:24:72.25:0,72,2694	0/0:26,0:26:75.26:0,75,2732	0/0:16,0:16:48.16:0,48,1781	1/1:3,11:18:26.82:595,27,0	1/1:2,3:8:18.47:244,18,0	0/0:9,0:9:27.09:0,27,1006	0/0:31,0:31:93.32:0,93,3288	0/0:20,0:20:60.21:0,60,2214	0/0:36,0:36:99:0,108,3890	0/0:22,0:22:66.22:0,66,2302	0/0:31,0:31:93.32:0,93,3424	1/1:2,20:22:61.91:894,62,0	1/1:0,7:11:27.51:404,28,0	0/0:28,0:25:84.29:0,84,3144	1/1:1,7:9:24.65:345,25,0
chr10	47255557	.	GTAACCTTC	G	6206.29	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=17.304;DP=665;FS=11.451;HRun=0;HaplotypeScore=214.0240;InbreedingCoeff=0.9949;MQ=84.24;MQ0=0;MQRankSum=-16.061;QD=45.30;ReadPosRankSum=0.909;VQSLOD=3.5405;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,120,5149	0/0:15,0:15:45.15:0,45,1825	0/0:30,0:30:87.29:0,87,3473	0/0:31,0:31:14.08:0,14,3356	1/1:9,16:25:58.88:537,59,0	0/0:30,0:30:90.31:0,90,4099	0/0:24,0:24:72.23:0,72,2905	0/0:32,0:32:93.32:0,93,3790	0/0:29,0:29:87.30:0,87,3747	1/1:6,19:25:74.79:1481,75,0	1/1:5,14:19:54.04:829,54,0	0/0:21,0:21:63.22:0,63,2767	0/0:27,0:27:81.28:0,81,3475	0/0:22,0:22:66.23:0,66,2779	0/0:26,0:26:75.22:0,75,3025	0/0:15,0:15:45.15:0,45,2082	1/1:7,11:18:37.76:805,38,0	1/1:3,3:6:18.06:336,18,0	0/0:15,0:15:45.15:0,45,1752	0/0:32,0:32:96.33:0,96,3996	0/0:21,0:21:63.22:0,63,2821	0/0:37,0:37:99:0,111,4853	0/0:21,0:21:63.20:0,63,2656	0/0:33,0:33:96.31:0,96,4042	1/1:3,20:23:48.16:1137,48,0	1/1:6,7:13:29.91:596,30,0	0/0:27,0:24:81.28:0,81,3588	1/1:1,7:8:24.08:485,24,0
chr10	47255561	.	CCTT	C	4018.87	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=16.452;DP=665;FS=6.752;HRun=0;HaplotypeScore=148.2908;InbreedingCoeff=0.9965;MQ=88.08;MQ0=0;MQRankSum=-15.469;QD=30.45;ReadPosRankSum=1.984;VQSLOD=4.0765;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,120,2673	0/0:13,0:13:39.13:0,39,918	0/0:35,0:35:96.33:0,96,2110	0/0:31,0:31:66.62:0,67,1880	1/1:16,7:23:42.10:625,42,0	0/0:31,0:31:93.32:0,93,2189	0/0:23,0:23:66.23:0,66,1558	0/0:35,0:35:96.33:0,96,2226	0/0:30,0:30:90.31:0,90,2103	1/1:20,3:23:69.04:721,69,0	1/1:14,5:19:48.10:678,48,0	0/0:21,0:21:63.22:0,63,1490	0/0:28,0:28:84.29:0,84,1982	0/0:20,0:20:60.19:0,60,1353	0/0:24,0:24:72.25:0,72,1698	0/0:16,0:16:48.16:0,48,1125	1/1:11,8:19:45.06:555,45,0	1/1:4,2:6:15.02:184,15,0	0/0:15,0:15:45.15:0,45,1064	0/0:32,0:32:96.32:0,96,2170	0/0:22,0:22:66.23:0,66,1554	0/0:36,0:36:99:0,108,2511	0/0:22,0:22:66.20:0,66,1468	0/0:32,0:32:93.32:0,93,2161	1/1:20,4:24:60.02:701,60,0	1/1:7,4:11:30.03:342,30,0	0/0:27,0:24:81.28:0,81,1904	1/1:7,0:7:21.01:211,21,0
chr10	47257501	.	GGTGTGTGTGTGTGTGTGTGTGTGT	G	1573.82	PASS	AB=0.880;AC=9;AF=0.173;AN=52;BaseQRankSum=4.053;DP=550;FS=21.961;HRun=0;HaplotypeScore=283.2353;InbreedingCoeff=0.2784;MQ=60.15;MQ0=11;MQRankSum=-3.393;QD=10.63;ReadPosRankSum=0.095;VQSLOD=0.6820;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:24.52:0,25,1355	0/0:4,0:4:0:0,0,0	0/1:25,0:10:0:0,0,0	./.	./.	0/0:19,0:18:11.32:0,11,633	0/0:23,0:21:21.04:0,21,769	0/0:17,0:16:4.82:0,5,33	0/0:22,0:22:9.01:0,9,311	1/1:24,0:24:5.52:206,6,0	0/0:8,0:10:2.60:0,3,24	0/0:18,0:18:22.80:0,23,622	0/0:18,0:19:18.03:0,18,1098	0/0:19,0:19:9.01:0,9,194	0/0:19,0:23:30.05:0,30,700	0/0:18,0:18:31.87:0,32,1272	0/1:24,0:25:5.39:116,0,5	0/1:22,0:22:67.34:318,0,67	0/0:18,0:15:14.73:0,15,253	0/0:5,0:8:18.06:0,18,635	0/0:56,0:54:30.06:0,30,699	0/0:11,0:11:15.03:0,15,633	0/0:7,0:7:6.02:0,6,262	0/0:26,0:26:40.02:0,40,2505	0/1:7,7:14:23.02:152,0,23	1/1:10,10:20:3.31:346,3,0	0/0:14,0:13:11.99:0,12,216	0/1:12,5:17:23.70:561,0,24
chr10	47259243	.	AC	A	1973.28	PASS	AB=0.969;AC=27;AF=0.482;AN=56;BaseQRankSum=13.691;DP=680;FS=21.051;HRun=9;HaplotypeScore=157.6739;InbreedingCoeff=0.7921;MQ=69.12;MQ0=14;MQRankSum=-8.475;QD=5.69;ReadPosRankSum=0.950;VQSLOD=0.0408;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,2:28:8.74:0,9,589	0/1:10,0:10:3.64:8,0,4	0/0:34,1:20:21.36:0,21,304	0/0:30,0:23:29.56:0,30,305	0/0:27,0:27:53.58:0,54,345	0/0:29,0:29:40.30:0,40,124	0/1:35,3:38:21.38:21,0,104	0/1:20,0:18:18.23:18,0,56	1/1:24,0:23:54.22:257,54,0	0/0:26,0:26:44.55:0,45,237	0/0:9,0:9:22.74:0,23,139	1/1:29,0:29:64.18:281,64,0	1/1:19,1:19:39.45:155,39,0	1/1:26,0:25:49.72:209,50,0	0/0:17,0:17:15.32:0,15,64	1/1:26,0:24:43.02:215,43,0	0/0:36,0:37:89.89:0,90,587	0/0:38,0:39:99:0,104,686	1/1:15,0:15:33.63:219,34,0	1/1:23,0:21:28.68:115,29,0	1/1:13,1:13:7.78:31,8,0	1/1:25,0:25:42.35:201,42,0	1/1:18,1:19:28.96:121,29,0	1/1:38,1:38:55.30:227,55,0	0/0:16,0:16:35.34:0,35,221	0/0:27,0:27:62.83:0,63,375	1/1:17,0:17:28.59:114,29,0	0/0:11,0:11:30.76:0,31,189
chr10	47259249	.	C	CA	1685.24	PASS	AB=1.000;AC=6;AF=0.107;AN=56;BaseQRankSum=-5.223;DP=704;FS=0.000;HRun=0;HaplotypeScore=170.7236;InbreedingCoeff=0.6257;MQ=67.17;MQ0=17;MQRankSum=3.463;QD=12.67;ReadPosRankSum=-0.718;VQSLOD=4.1258;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:75.04:0,75,929	0/0:9,0:9:19.68:0,20,115	0/1:44,0:22:11.32:11,0,365	0/0:34,0:24:40.44:0,40,474	0/0:26,0:26:75.08:0,75,872	1/1:2,29:31:47.11:745,47,0	1/1:6,35:40:80.24:1051,80,0	0/1:17,0:15:12.86:13,0,98	0/0:26,0:25:58.39:0,58,507	0/0:26,0:26:72.35:0,72,781	0/0:13,0:13:29.97:0,30,352	0/0:29,0:29:71.99:0,72,684	0/0:18,0:17:44.80:0,45,423	0/0:26,0:25:59.97:0,60,526	0/0:16,0:16:41.11:0,41,289	0/0:24,0:23:56.51:0,57,511	0/0:38,0:38:99:0,108,1343	0/0:40,0:40:99:0,120,1528	0/0:15,0:15:39.64:0,40,288	0/0:24,0:22:44.86:0,45,369	0/0:15,0:14:9:0,9,79	0/0:26,0:26:54.36:0,54,488	0/0:22,0:21:34.24:0,34,293	0/0:39,0:38:74.96:0,75,734	0/0:16,0:16:45.01:0,45,540	0/0:31,0:31:92.81:0,93,1039	0/0:19,0:19:33.02:0,33,302	0/0:12,0:12:36.06:0,36,448
chr10	47259250	.	CCCACA	C	11920.63	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=-1.694;DP=698;FS=8.105;HRun=0;HaplotypeScore=173.9443;InbreedingCoeff=0.9034;MQ=67.11;MQ0=17;MQRankSum=-10.594;QD=36.68;ReadPosRankSum=3.854;VQSLOD=4.2048;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:45.11:0,45,1863	1/1:9,0:9:21.07:348,21,0	0/0:42,0:21:56.92:0,57,812	0/0:34,0:24:47.49:0,47,911	0/0:25,0:25:61.36:0,61,1248	0/0:26,0:26:60.20:0,60,1131	0/0:42,0:41:51.74:0,52,1593	0/1:20,0:18:47.13:82,0,47	1/1:3,23:25:60.21:1227,60,0	0/0:26,0:26:57.40:0,57,1197	0/0:13,0:13:36.12:0,36,759	1/1:3,26:29:72.24:1446,72,0	1/1:2,16:17:45.15:921,45,0	1/1:1,24:24:57.20:1171,57,0	1/1:16,0:16:5.23:495,5,0	1/1:8,16:22:53.92:981,54,0	0/0:36,0:36:99:0,105,2277	0/0:40,0:40:99:0,120,2657	1/1:1,14:15:39.04:588,39,0	1/1:3,21:22:39.07:737,39,0	1/1:2,12:13:9.03:185,9,0	1/1:4,22:26:53.89:1037,54,0	1/1:6,16:21:33:670,33,0	1/1:3,35:37:62.83:1354,63,0	0/0:16,0:16:41.93:0,42,914	0/0:32,0:32:92.04:0,92,1971	1/1:0,19:19:32.74:679,33,0	0/0:12,0:12:35.12:0,35,730
chr10	47259251	.	CCACA	C	6686.58	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=12.402;DP=698;FS=2.392;HRun=0;HaplotypeScore=182.5282;InbreedingCoeff=0.9764;MQ=66.46;MQ0=17;MQRankSum=-11.928;QD=20.70;ReadPosRankSum=3.205;VQSLOD=4.4610;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:66.23:0,66,1510	1/1:9,0:9:21.03:202,21,0	0/0:42,0:21:34.96:0,35,535	0/0:34,0:24:41.08:0,41,700	0/0:25,0:25:51.17:0,51,1189	0/0:26,0:26:63.22:0,63,1092	0/0:41,0:40:87.27:0,87,1459	1/1:19,0:17:5.94:69,6,0	1/1:23,2:25:60.17:679,60,0	0/0:26,0:26:51.84:0,52,1206	0/0:14,0:14:36.10:0,36,748	1/1:27,2:29:69.16:788,69,0	1/1:17,1:17:45.13:515,45,0	1/1:24,0:24:57.16:650,57,0	1/1:18,0:18:36.53:368,37,0	1/1:19,2:22:47.98:541,48,0	0/0:37,0:37:99:0,102,2278	0/0:41,0:41:99:0,118,2631	1/1:14,0:14:23.94:260,24,0	1/1:21,1:22:39.06:435,39,0	1/1:13,1:13:9.03:103,9,0	1/1:24,2:26:50.72:574,51,0	1/1:18,3:20:32.85:369,33,0	1/1:37,0:36:65.95:755,66,0	0/0:16,0:16:39.13:0,39,887	0/0:32,0:32:87.30:0,87,1936	1/1:19,0:19:32.88:377,33,0	0/0:12,0:12:30.10:0,30,686
chr10	47259252	.	CACACA	C	8775.33	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=8.195;DP=699;FS=5.462;HRun=0;HaplotypeScore=186.0879;InbreedingCoeff=0.9534;MQ=67.03;MQ0=18;MQRankSum=-11.754;QD=27.34;ReadPosRankSum=4.478;VQSLOD=3.8516;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:67.69:0,68,1993	1/1:0,9:9:21.07:486,21,0	0/0:45,0:22:59.86:0,60,980	0/0:36,0:24:51:0,51,1068	0/0:26,0:26:74.41:0,74,1698	0/0:26,0:26:63.22:0,63,1643	0/0:41,0:40:84.97:0,85,2270	1/1:3,14:16:2.43:284,2,0	1/1:26,0:25:60.20:821,60,0	0/0:26,0:26:76.89:0,77,1720	0/0:15,0:15:39.13:0,39,1070	1/1:29,0:29:70.11:932,70,0	1/1:18,0:17:45.15:605,45,0	1/1:25,0:24:57.19:845,57,0	1/1:1,15:17:13.72:750,14,0	1/1:24,0:22:51.65:625,52,0	0/0:37,0:37:99:0,111,3042	0/0:41,0:41:99:0,123,3481	1/1:14,0:14:8.41:283,8,0	1/1:24,0:22:36.56:502,37,0	1/1:14,0:13:9.03:131,9,0	1/1:25,1:26:52.14:707,52,0	1/1:21,0:20:32.87:483,33,0	1/1:37,0:36:52.20:849,52,0	0/0:16,0:16:45.04:0,45,1206	0/0:32,0:32:95.99:0,96,2622	1/1:19,0:19:32.86:472,33,0	0/0:12,0:12:36.11:0,36,960
chr10	47259842	.	GAGGA	G	5000.22	PASS	AB=0.664;AC=13;AF=0.232;AN=56;BaseQRankSum=-1.483;DP=609;FS=8.147;HRun=0;HaplotypeScore=138.4544;InbreedingCoeff=0.3350;MQ=53.99;MQ0=6;MQRankSum=-1.973;QD=25.77;ReadPosRankSum=1.646;VQSLOD=4.4087;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:44:88.66:0,89,2524	0/1:6,8:14:36.10:416,0,36	0/0:23,0:9:15.05:0,15,332	0/0:19,0:10:5.14:0,5,123	0/0:26,0:25:63.20:0,63,1325	0/0:17,0:17:15.05:0,15,271	0/0:20,0:20:12.03:0,12,190	1/1:18,5:21:27.09:431,27,0	0/1:15,9:24:1.24:687,0,1	0/0:24,0:24:66.06:0,66,1518	0/0:10,0:10:24.07:0,24,546	0/1:13,10:22:26.72:593,0,27	0/1:11,8:18:18.13:568,0,18	0/0:24,0:24:61.53:0,62,1273	1/1:8,9:16:15.11:528,15,0	0/1:9,9:18:22.02:465,0,22	0/0:31,0:31:69.02:0,69,1395	0/0:27,0:27:65.30:0,65,1317	0/0:17,0:16:39.12:0,39,850	0/0:40,0:40:99:0,105,2143	0/0:11,0:10:11.40:0,11,222	1/1:7,15:21:19.71:837,20,0	0/1:8,15:23:28.71:433,0,29	0/1:4,7:10:11.56:44,0,12	0/0:21,0:21:54.18:0,54,1224	0/0:21,0:21:60.20:0,60,1347	0/0:28,0:28:75.12:0,75,1626	0/0:10,0:10:27.09:0,27,664
chr10	47259859	.	A	AGGAG	696.78	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=8.527;DP=646;FS=8.305;HRun=0;HaplotypeScore=174.5234;InbreedingCoeff=0.1851;MQ=49.34;MQ0=10;MQRankSum=-7.646;QD=4.22;ReadPosRankSum=-0.781;VQSLOD=1.9881;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:49:99:0,138,2065	0/1:15,0:15:70.75:71,0,246	0/0:22,0:9:20.98:0,21,252	0/0:22,0:7:14.16:0,14,146	0/0:29,0:27:69.07:0,69,1022	1/1:2,14:17:11.70:311,12,0	1/1:0,24:28:9.03:228,9,0	0/0:29,0:20:28.50:0,29,388	0/1:23,0:23:45.45:45,0,484	0/0:27,0:27:69.13:0,69,1023	0/0:10,0:10:27.02:0,27,415	0/0:22,0:21:18.73:0,19,466	0/0:20,0:19:15.05:0,15,349	0/1:26,0:26:85.01:85,0,680	0/1:18,0:17:71.24:71,0,275	0/1:17,0:17:2.41:2,0,343	0/0:29,0:29:75.49:0,75,1062	0/0:28,0:28:83.03:0,83,1117	0/0:18,0:16:12.90:0,13,541	0/0:44,0:44:5.85:0,6,1348	0/1:12,0:11:23.70:24,0,171	0/0:26,0:25:71.84:0,72,714	0/0:20,0:20:13.49:0,13,336	0/1:9,0:8:8.15:8,0,26	0/0:22,0:22:57.03:0,57,872	0/0:24,0:24:66.18:0,66,1013	0/0:29,0:29:29.08:0,29,1104	0/0:9,0:9:27.06:0,27,426
chr10	47260340	.	TA	T	6519	PASS	AB=0.896;AC=32;AF=0.571;AN=56;BaseQRankSum=14.633;DP=659;FS=6.006;HRun=11;HaplotypeScore=80.3258;InbreedingCoeff=0.8471;MQ=80.85;MQ0=0;MQRankSum=0.113;QD=16.59;ReadPosRankSum=3.480;VQSLOD=5.8520;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:30:65.33:0,65,860	1/1:2,8:10:23.97:197,24,0	0/0:26,0:26:31.50:0,32,276	0/0:14,0:14:0.87:0,1,54	0/0:27,2:29:19.86:0,20,606	0/0:25,1:27:50.38:0,50,725	0/1:18,3:21:22.80:23,0,397	1/1:4,18:22:53.81:425,54,0	1/1:5,22:27:62.85:511,63,0	0/0:31,0:31:71.68:0,72,725	0/0:16,1:17:26.34:0,26,464	1/1:3,21:27:60.03:461,60,0	1/1:5,17:22:47.93:394,48,0	1/1:6,19:25:47.93:394,48,0	1/1:6,28:34:77.45:611,77,0	1/1:2,20:22:53.94:443,54,0	0/0:31,1:33:62.34:0,62,819	0/0:14,0:14:42.05:0,42,422	1/1:7,16:23:47.84:385,48,0	1/1:6,36:43:99:819,101,0	1/1:2,7:9:17.97:148,18,0	1/1:3,19:23:20.78:361,21,0	1/1:2,19:22:52.77:424,53,0	1/1:2,17:21:43.03:332,43,0	0/0:19,2:21:10.85:0,11,515	0/0:24,0:24:57.13:0,57,601	1/1:3,28:31:53.59:591,54,0	0/1:10,1:11:0.58:1,0,200
chr10	47261437	.	A	AGTGTGT	5918.85	PASS	AB=0.934;AC=47;AF=0.839;AN=56;BaseQRankSum=4.203;DP=593;FS=25.102;HRun=0;HaplotypeScore=186.4843;InbreedingCoeff=0.3396;MQ=62.05;MQ0=8;MQRankSum=-4.217;QD=11.43;ReadPosRankSum=-1.625;VQSLOD=2.3265;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:59.87:0,60,1162	0/1:12,0:12:0:0,0,0	0/0:44,0:22:5.99:0,6,61	0/1:38,0:20:11.83:12,0,33	1/1:23,0:22:9.01:156,9,0	1/1:16,8:27:18.06:418,18,0	0/1:17,3:24:25.28:397,0,25	1/1:20,0:20:12.02:285,12,0	1/1:21,0:20:12.04:328,12,0	1/1:23,0:23:42.14:1001,42,0	1/1:13,0:13:8.77:142,9,0	1/1:33,0:33:18.06:441,18,0	1/1:17,0:18:6.91:151,7,0	1/1:18,0:17:9.03:208,9,0	1/1:20,0:19:6.02:123,6,0	1/1:15,0:15:3.01:49,3,0	1/1:16,0:16:12.51:308,13,0	1/1:10,0:9:3.01:78,3,0	1/1:15,0:15:15.02:320,15,0	1/1:18,0:17:5.74:97,6,0	1/1:26,0:26:9.03:149,9,0	1/1:23,0:22:3.10:84,3,0	1/1:8,0:13:3.48:80,3,0	0/1:23,0:26:0:1,0,0	0/1:20,0:19:0.07:0,0,0	1/1:20,0:19:27.09:703,27,0	1/1:21,0:21:12.04:312,12,0	1/1:3,0:2:3.01:78,3,0
chr10	47262338	.	A	ATGTGTGTGTGTGTGTG	8812.59	PASS	AB=0.838;AC=41;AF=0.759;AN=54;BaseQRankSum=1.824;DP=831;FS=1.385;HRun=0;HaplotypeScore=330.9415;InbreedingCoeff=0.2731;MQ=56.05;MQ0=10;MQRankSum=-5.794;QD=12.64;ReadPosRankSum=0.637;VQSLOD=2.3466;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:55:41.83:0,42,1162	1/1:7,0:19:3.01:49,3,0	0/1:31,0:9:0:0,0,0	./.	0/1:23,0:22:0.52:1,0,1	0/1:23,0:23:11.39:11,0,637	0/0:37,0:40:46.02:0,46,1644	1/1:26,0:26:21.01:377,21,0	0/1:21,0:37:6.96:7,0,92	1/1:29,0:27:34.93:1787,35,0	1/1:14,0:13:3:25,3,0	0/1:14,0:36:2.98:3,0,81	1/1:25,0:31:35.37:411,35,0	1/1:31,0:31:8.20:184,8,0	1/1:17,0:42:3.01:49,3,0	0/1:15,0:28:99:105,0,101	1/1:23,0:23:35.97:1195,36,0	1/1:11,1:11:24.07:1162,24,0	1/1:25,0:24:18.90:397,19,0	1/1:9,0:21:0.55:2,1,0	1/1:82,0:78:42.89:697,43,0	0/1:10,0:20:0:1,0,0	0/1:13,0:13:11.99:88,0,12	0/1:48,0:56:3.43:207,0,3	1/1:21,0:21:8.93:161,9,0	1/1:23,0:23:43.35:1349,43,0	1/1:13,0:24:5.35:138,5,0	1/1:6,0:6:9.50:407,10,0
chr10	47262376	.	GCCA	G	1055.10	PASS	AB=0.838;AC=12;AF=0.214;AN=56;BaseQRankSum=7.350;DP=819;FS=39.906;HRun=0;HaplotypeScore=191.0896;InbreedingCoeff=-0.2665;MQ=47.91;MQ0=19;MQRankSum=-6.249;QD=3.01;ReadPosRankSum=-2.074;VQSLOD=1.0002;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:53:99:0,127,3031	0/0:17,0:17:24.08:0,24,571	0/1:50,0:13:4.88:5,0,715	0/0:57,0:15:45.15:0,45,1004	0/0:20,1:20:31.82:0,32,741	0/0:18,0:18:54.19:0,54,1322	0/0:42,0:43:84.19:0,84,2699	0/1:31,0:31:12.96:13,0,1688	0/0:25,0:25:50.91:0,51,1153	0/1:24,5:27:41.01:41,0,1491	0/0:10,3:12:15.05:0,15,367	0/0:32,0:32:51.17:0,51,1178	0/1:30,0:30:22.94:23,0,1336	0/1:20,7:27:60.27:60,0,961	0/0:27,1:28:27.09:0,27,652	0/0:27,0:27:8.36:0,8,1298	0/1:13,4:18:99:168,0,786	0/1:11,3:14:99:145,0,622	0/1:10,1:12:99:131,0,626	0/0:18,1:19:29.72:0,30,719	0/1:71,5:78:99:143,0,3589	0/0:24,0:24:49.32:0,49,1182	0/0:12,0:12:24.05:0,24,582	0/0:50,1:51:31.13:0,31,1785	0/1:17,4:21:10.13:10,0,640	0/1:16,8:24:99:318,0,1039	0/0:28,0:28:63.08:0,63,1454	0/1:1,6:7:61.91:146,0,62
chr10	47262497	.	ATGTG	A	11879.61	PASS	AB=0.567;AC=36;AF=0.643;AN=56;BaseQRankSum=-11.153;DP=740;FS=2.035;HRun=0;HaplotypeScore=189.7438;InbreedingCoeff=0.8678;MQ=58.16;MQ0=4;MQRankSum=-0.863;QD=25.12;ReadPosRankSum=6.092;VQSLOD=4.7717;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:51.46:0,51,1287	0/0:1,0:9:19.53:0,20,88	0/0:24,0:10:18.22:0,18,441	0/0:36,0:15:26.13:0,26,478	1/1:6,19:25:45.07:702,45,0	1/1:5,14:19:42.14:693,42,0	1/1:11,20:31:33.11:560,33,0	0/0:14,0:34:67.67:0,68,356	1/1:7,23:31:45.09:740,45,0	1/1:5,21:26:63.21:1036,63,0	1/1:1,21:22:51.65:866,52,0	1/1:8,23:31:42.10:682,42,0	1/1:8,16:24:32.94:528,33,0	0/1:9,0:28:3.26:3,0,159	0/0:5,0:25:36.20:0,36,161	1/1:6,15:22:33.11:559,33,0	1/1:6,18:25:35.96:611,36,0	1/1:5,19:23:39.13:662,39,0	0/0:6,0:18:45.41:0,45,260	0/1:4,2:28:34.46:34,0,206	0/0:25,0:60:74.76:0,75,352	1/1:2,17:19:35.99:518,36,0	1/1:3,18:21:38.69:631,39,0	1/1:7,19:26:33.11:560,33,0	1/1:6,27:33:63.21:1069,63,0	1/1:6,20:26:57.17:917,57,0	0/0:7,0:30:58.74:0,59,301	1/1:1,11:12:30.10:509,30,0
chr10	47263870	.	T	TA	6766.01	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-6.062;DP=692;FS=1.926;HRun=1;HaplotypeScore=98.2985;InbreedingCoeff=0.9997;MQ=80.36;MQ0=1;MQRankSum=1.032;QD=39.11;ReadPosRankSum=2.423;VQSLOD=5.2185;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,105,1327	0/0:13,0:13:39.09:0,39,488	0/0:16,0:16:36.10:0,36,447	0/0:21,0:21:42.06:0,42,497	1/1:0,27:27:75.21:1099,75,0	0/0:28,0:28:81.15:0,81,998	0/0:29,0:29:81.26:0,81,1051	0/0:28,0:28:81.26:0,81,1048	0/0:26,0:26:75.24:0,75,969	1/1:1,21:22:63.21:927,63,0	1/1:0,12:12:30.10:448,30,0	0/0:35,0:35:99:0,102,1294	0/0:18,0:18:54.09:0,54,661	0/0:31,0:31:84.21:0,84,1050	0/0:30,0:30:90.28:0,90,1153	0/0:20,0:20:60.18:0,60,765	1/1:0,36:36:90.30:1347,90,0	1/1:0,25:25:69.23:1033,69,0	0/0:18,0:18:51.16:0,51,649	0/0:17,0:17:51.13:0,51,638	0/0:65,0:64:99:0,172,2188	0/0:14,0:14:42.14:0,42,545	0/0:15,0:15:39.13:0,39,506	0/0:36,0:36:99:0,102,1274	1/1:0,24:23:54.18:809,54,0	1/1:0,16:16:48.15:697,48,0	0/0:21,0:21:60.19:0,60,779	1/1:0,11:11:27.09:405,27,0
chr10	47263974	.	CTAACCTTACTTTCTTTCTTTCTTTTTTTTTTTATAGTATTTTATTT	C	5509.58	PASS	AC=38;AF=0.826;AN=46;BaseQRankSum=1.360;DP=453;FS=3.203;HRun=0;HaplotypeScore=462.3528;InbreedingCoeff=0.3913;MQ=71.79;MQ0=0;MQRankSum=-2.967;QD=19.33;ReadPosRankSum=2.726;VQSLOD=1.7485;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:90.28:0,90,11781	1/1:8,4:12:3.01:344,3,0	0/0:17,0:17:19.43:0,19,1097	0/0:14,0:14:20.88:0,21,945	./.	1/1:9,2:11:3.01:344,3,0	1/1:12,0:12:3.01:45,3,0	1/1:21,0:21:9.02:173,9,0	1/1:16,3:19:3.01:344,3,0	./.	1/1:6,0:5:3.01:32,3,0	1/1:19,4:23:6.02:689,6,0	1/1:19,8:27:9.03:1033,9,0	./.	1/1:14,0:14:2.99:25,3,0	./.	1/1:19,0:19:6.49:279,6,0	1/1:8,0:8:3.01:88,3,0	1/1:17,0:17:3.01:46,3,0	1/1:13,3:15:3.01:344,3,0	0/0:24,0:24:1.25:0,1,3	1/1:9,0:9:6.02:112,6,0	1/1:12,2:14:3.01:253,3,0	1/1:17,0:17:5.20:279,5,0	1/1:5,0:5:2.99:23,3,0	1/1:11,4:15:9.01:712,9,0	1/1:17,3:20:3.01:344,3,0	./.
chr10	47263989	.	T	TA	458.60	PASS	AB=1.000;AC=21;AF=0.477;AN=44;BaseQRankSum=0.247;DP=123;FS=1.033;HRun=0;HaplotypeScore=50.2019;InbreedingCoeff=0.4520;MQ=110.06;MQ0=1;MQRankSum=0.599;QD=21.84;ReadPosRankSum=-3.895;VQSLOD=3.6204;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,105,1414	0/0:4,0:4:2.04:0,2,6	0/0:19,0:17:15.54:0,16,422	0/0:12,0:10:20.98:0,21,225	./.	0/0:2,0:2:2.04:0,2,6	1/1:1,0:1:3.01:45,3,0	1/1:3,0:3:9.02:118,9,0	0/0:3,0:3:2.04:0,2,6	./.	1/1:1,0:1:3.01:32,3,0	0/0:4,0:4:4.07:0,4,13	0/0:8,0:8:6.11:0,6,19	./.	1/1:1,0:1:3:25,3,0	./.	1/1:0,3:3:6.02:82,6,0	1/1:1,0:1:3.01:41,3,0	1/1:1,0:1:3.01:46,3,0	0/0:3,0:3:2.04:0,2,6	./.	1/1:2,0:2:6.02:87,6,0	0/0:2,0:2:0:0,0,0	1/1:0,3:3:6.02:81,6,0	1/1:1,0:1:2.99:23,3,0	0/1:4,0:4:5.85:16,0,6	0/0:3,0:3:2.04:0,2,6	./.
chr10	47264365	.	AT	A	3995.03	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=15.692;DP=707;FS=5.555;HRun=2;HaplotypeScore=95.9347;InbreedingCoeff=0.9803;MQ=55.76;MQ0=8;MQRankSum=-8.271;QD=24.66;ReadPosRankSum=0.201;VQSLOD=3.1806;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,129,1929	0/0:14,0:14:36.12:0,36,537	0/0:16,0:9:27.08:0,27,376	0/0:30,0:19:54.17:0,54,773	1/1:0,17:14:18.06:233,18,0	0/0:14,0:14:42.14:0,42,626	0/0:33,0:33:93.31:0,93,1388	0/0:27,0:26:75.25:0,75,1107	0/0:36,0:36:99:0,108,1594	1/1:0,34:29:84.27:1090,84,0	1/1:0,18:17:30.10:389,30,0	0/0:40,0:40:99:0,114,1666	0/0:16,0:15:45.15:0,45,668	0/0:28,0:28:84.27:0,84,1237	0/0:27,0:27:78.26:0,78,1168	0/0:23,0:23:69.22:0,69,1012	1/1:2,19:19:42.14:545,42,0	1/1:2,22:22:42.14:545,42,0	0/0:29,0:27:78.25:0,78,1145	0/0:16,0:15:42.14:0,42,629	0/0:40,0:40:99:0,114,1707	0/0:34,0:34:96.33:0,96,1435	0/0:19,0:19:45.15:0,45,674	0/0:32,0:32:96.31:0,96,1420	1/1:0,21:13:24.08:311,24,0	1/1:1,23:23:63.19:804,63,0	0/0:27,0:27:81.27:0,81,1214	1/1:0,3:2:6.02:78,6,0
chr10	47265451	.	G	GATACC	24828.53	PASS	AB=0.522;AC=33;AF=0.589;AN=56;BaseQRankSum=14.668;DP=597;FS=0.000;HRun=0;HaplotypeScore=119.7480;InbreedingCoeff=0.9369;MQ=66.25;MQ0=0;MQRankSum=-19.044;QD=79.83;ReadPosRankSum=2.942;VQSLOD=6.5000;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,141,3212	0/0:15,0:15:42.14:0,42,968	0/0:31,0:31:93.32:0,93,2079	0/0:24,0:24:57.19:0,57,1329	1/1:2,24:28:60.20:1904,60,0	1/1:0,16:18:48.16:1545,48,0	1/1:0,19:23:57.20:1820,57,0	0/0:25,0:25:75.25:0,75,1705	1/1:0,16:18:45.15:1432,45,0	1/1:0,22:24:72.23:2153,72,0	1/1:0,13:15:39.13:1229,39,0	0/1:2,22:24:6.71:1851,0,7	1/1:1,21:24:63.22:2013,63,0	0/0:13,0:13:39.13:0,39,909	0/0:26,0:26:78.25:0,78,1751	1/1:0,24:24:69.24:2216,69,0	1/1:4,14:18:39.11:1182,39,0	1/1:1,9:11:24.08:772,24,0	0/0:14,0:14:39.13:0,39,862	0/0:24,0:24:69.23:0,69,1562	0/0:37,0:37:99:0,111,2522	1/1:0,17:19:48.16:1529,48,0	1/1:0,10:11:27.09:856,27,0	1/1:0,7:10:18.06:579,18,0	1/1:0,13:14:36.12:1146,36,0	1/1:0,19:21:63.19:1947,63,0	0/0:30,0:30:90.31:0,90,2077	1/1:2,6:9:21.07:655,21,0
chr10	47265723	.	TGCTTTGCCGGGACAATGGATACTACTCAGCCGGA	T	12263.01	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=11.222;DP=602;FS=3.550;HRun=0;HaplotypeScore=498.3116;InbreedingCoeff=0.9680;MQ=65.58;MQ0=1;MQRankSum=-10.470;QD=145.99;ReadPosRankSum=8.098;VQSLOD=3.6638;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,151,17652	0/0:8,0:8:24.08:0,24,3035	0/0:24,0:20:54.19:0,54,3414	0/0:30,0:30:84.29:0,84,5574	0/0:28,0:28:78.18:0,78,8692	0/0:20,0:20:57.20:0,57,6990	0/0:23,0:23:69.24:0,69,8807	0/0:22,0:22:66.22:0,66,5115	1/1:6,6:12:15.05:1333,15,0	0/0:32,0:32:96.29:0,96,9126	0/0:25,0:25:72.24:0,72,7713	1/1:4,12:16:33.11:2933,33,0	1/1:0,10:10:30.10:2666,30,0	0/0:14,0:14:39.13:0,39,5340	0/0:31,0:31:93.31:0,93,11327	1/1:5,10:15:27.09:2399,27,0	0/0:33,0:33:99:0,99,11643	0/0:13,0:13:39.13:0,39,4044	0/0:24,0:24:69.24:0,69,5405	0/0:26,0:26:78.25:0,78,9498	0/0:22,0:22:66.23:0,66,7437	1/1:5,6:11:15.05:1333,15,0	1/1:6,3:9:6.02:533,6,0	1/1:4,7:11:12.04:1066,12,0	0/0:17,0:17:51.17:0,51,5943	0/0:39,0:38:99:0,108,12030	0/0:27,0:27:78.27:0,78,9334	0/0:8,0:8:24.08:0,24,2573
chr10	47266078	.	AGCAAGAGAACCCAGCAT	A	3716.57	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.402;DP=573;FS=5.255;HRun=0;HaplotypeScore=269.0768;InbreedingCoeff=0.9325;MQ=74.16;MQ0=0;MQRankSum=-7.909;QD=97.80;ReadPosRankSum=1.732;VQSLOD=2.7419;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:90.19:0,90,5309	0/0:11,0:11:33.10:0,33,1974	0/0:26,0:26:73.13:0,73,3164	0/0:24,0:24:67.97:0,68,3068	0/0:11,0:11:33.11:0,33,2521	1/1:1,10:11:27.09:1304,27,0	1/1:0,27:27:51.18:2412,51,0	0/0:18,0:18:45.15:0,45,2435	0/0:22,0:22:63.22:0,63,4651	0/0:12,0:12:36.06:0,36,2056	0/0:11,0:11:33.09:0,33,1736	0/0:33,0:33:99:0,99,7039	0/0:20,0:20:60.21:0,60,4316	0/0:20,0:20:60.21:0,60,3852	0/0:19,0:19:57.20:0,57,3558	0/0:23,0:23:69.24:0,69,4288	0/0:58,0:58:99:0,172,12142	0/0:30,0:30:90.31:0,90,6005	0/0:13,0:13:39.12:0,39,1514	0/0:9,0:9:27.08:0,27,1779	0/0:30,0:30:83.77:0,84,4733	0/0:15,0:15:39.12:0,39,2395	0/0:4,0:4:6.02:0,6,210	0/0:33,0:33:93.32:0,93,6086	0/0:12,0:12:33.11:0,33,1984	0/0:18,0:18:51.15:0,51,2925	0/0:27,0:27:81.26:0,81,5957	0/0:4,0:4:12.01:0,12,314
chr10	47266484	.	CT	C	5552.24	PASS	AB=1.000;AC=41;AF=0.732;AN=56;BaseQRankSum=10.085;DP=465;FS=5.695;HRun=9;HaplotypeScore=95.2387;InbreedingCoeff=0.8479;MQ=69.46;MQ0=4;MQRankSum=0.621;QD=15.34;ReadPosRankSum=2.007;VQSLOD=5.0131;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,2:28:20.26:0,20,720	0/0:9,0:9:27.08:0,27,312	0/0:16,0:12:0.19:0,0,100	0/1:12,0:7:8.92:9,0,60	1/1:23,0:23:43.75:273,44,0	0/0:14,0:14:33.10:0,33,381	0/0:5,0:5:12.04:0,12,138	0/0:24,0:23:39.04:0,39,420	1/1:0,9:9:21.01:192,21,0	1/1:22,0:21:44.47:309,44,0	1/1:24,0:24:51.65:335,52,0	1/1:2,11:13:27:247,27,0	1/1:2,6:8:18.01:165,18,0	1/1:3,8:11:18.01:165,18,0	0/0:7,0:7:21.06:0,21,242	1/1:2,11:13:24.01:220,24,0	1/1:28,0:28:41.65:283,42,0	1/1:27,0:27:65.52:384,66,0	1/1:5,19:24:57.02:521,57,0	1/1:6,13:19:36.01:329,36,0	1/1:0,5:5:12.01:110,12,0	1/1:0,7:7:15.01:136,15,0	1/1:9,18:27:44.84:412,45,0	1/1:2,15:17:42.02:384,42,0	1/1:23,0:23:61.27:393,61,0	1/1:21,0:20:46.57:309,47,0	1/1:4,13:17:32.69:302,33,0	1/1:12,0:11:11.74:73,12,0
chr10	47266603	.	GT	G	556.78	PASS	AB=0.923;AC=5;AF=0.089;AN=56;BaseQRankSum=-0.059;DP=469;FS=4.455;HRun=10;HaplotypeScore=97.5623;InbreedingCoeff=0.7659;MQ=71.99;MQ0=0;MQRankSum=-1.134;QD=13.26;ReadPosRankSum=0.150;VQSLOD=3.6600;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,2:33:26.10:0,26,743	0/0:12,0:12:30.07:0,30,319	0/0:17,0:16:9.86:0,10,298	0/1:11,1:11:0.44:0,0,111	0/0:20,0:20:60.16:0,60,663	1/1:0,16:16:44.99:391,45,0	1/1:0,14:14:32.99:287,33,0	0/0:25,0:24:60.55:0,61,621	0/0:26,0:26:75.20:0,75,830	0/0:16,0:16:36.09:0,36,392	0/0:12,0:12:26.99:0,27,283	0/0:13,1:14:7.03:0,7,305	0/0:9,0:9:27.07:0,27,299	0/0:12,0:12:30.08:0,30,332	0/0:19,0:19:57.15:0,57,630	0/0:10,0:10:30.08:0,30,332	0/0:26,0:26:72.19:0,72,796	0/0:18,0:19:38.73:0,39,392	0/0:20,0:20:54.13:0,54,583	0/0:19,0:20:53.97:0,54,571	0/0:9,0:9:27.07:0,27,298	0/0:13,0:12:33.09:0,33,365	0/0:12,0:12:27.07:0,27,299	0/0:25,0:25:60.14:0,60,654	0/0:10,0:11:4.07:0,4,238	0/0:18,0:18:36.07:0,36,376	0/0:14,0:14:39.07:0,39,411	0/0:15,0:15:33.08:0,33,357
chr10	47269555	.	GGTACATAA	G	32745.47	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=12.306;DP=654;FS=0.372;HRun=0;HaplotypeScore=204.1534;InbreedingCoeff=0.9902;MQ=70.39;MQ0=0;MQRankSum=-15.963;QD=62.85;ReadPosRankSum=2.643;VQSLOD=4.7169;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,102,4109	0/0:10,0:10:30.10:0,30,1297	0/0:20,0:20:57.20:0,57,2335	0/0:15,0:15:28.23:0,28,1372	1/1:1,30:31:69.23:1916,69,0	1/1:2,21:22:54.19:1581,54,0	1/1:6,20:26:45.15:1305,45,0	0/0:19,0:19:51.17:0,51,1990	1/1:2,24:26:63.22:1844,63,0	1/1:6,23:29:57.18:1411,57,0	1/1:2,22:24:51.17:1388,51,0	1/1:1,25:26:66.23:1930,66,0	1/1:3,22:25:66.23:1932,66,0	1/1:2,27:29:72.07:2042,72,0	0/0:32,1:33:11.54:0,12,4052	1/1:1,30:31:75.26:2196,75,0	1/1:3,16:19:33.11:966,33,0	1/1:2,21:23:39.13:1142,39,0	1/1:3,19:22:54.17:1500,54,0	1/1:0,17:17:48.16:1405,48,0	1/1:5,22:27:41.66:1179,42,0	1/1:2,22:24:57.20:1668,57,0	1/1:1,22:23:60.20:1653,60,0	1/1:6,16:22:18.06:475,18,0	1/1:1,19:20:45.15:1317,45,0	1/1:2,18:20:51.18:1439,51,0	1/1:2,24:26:62.84:1844,63,0	1/1:0,8:8:21.07:614,21,0
chr10	47271302	.	CTTAT	C	1642.73	PASS	AB=0.792;AC=10;AF=0.179;AN=56;BaseQRankSum=10.116;DP=665;FS=4.380;HRun=0;HaplotypeScore=169.9038;InbreedingCoeff=0.7342;MQ=55.76;MQ0=0;MQRankSum=-5.466;QD=20.03;ReadPosRankSum=-3.941;VQSLOD=2.3839;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,105,2767	0/0:6,0:6:12.04:0,12,328	0/0:22,0:18:41.02:0,41,997	0/0:26,0:23:22.47:0,22,1029	0/0:22,0:22:51.16:0,51,1274	0/0:25,0:25:66.18:0,66,1622	0/0:23,1:24:63.02:0,63,1701	0/0:31,0:31:90.03:0,90,2192	0/0:40,0:40:90.31:0,90,2392	0/0:39,0:39:99:0,108,2901	0/0:15,0:15:42.14:0,42,1117	0/0:36,0:36:99:0,102,2621	0/0:34,0:34:84.29:0,84,2264	0/1:4,10:14:16.51:480,0,17	0/0:36,0:36:81.26:0,81,2028	0/0:23,0:23:57.20:0,57,1523	0/1:24,0:24:11.96:12,0,779	0/0:14,0:14:33.11:0,33,855	1/1:1,3:4:8.99:113,9,0	1/1:2,10:12:35.28:593,35,0	1/1:1,19:21:25.03:318,25,0	0/0:34,0:34:75.95:0,76,2372	0/0:23,0:23:57.04:0,57,1544	0/0:31,0:31:14.15:0,14,2100	0/0:18,0:18:45.13:0,45,1214	0/0:38,0:38:99:0,108,2865	1/1:0,7:7:15.05:290,15,0	0/0:8,0:8:24.08:0,24,654
chr10	47271320	.	CCCTT	C	74.27	PASS	AB=0.984;AC=8;AF=0.143;AN=56;BaseQRankSum=9.759;DP=633;FS=9.303;HRun=0;HaplotypeScore=185.5616;InbreedingCoeff=0.0721;MQ=51.13;MQ0=3;MQRankSum=-7.197;QD=0.86;ReadPosRankSum=-3.689;VQSLOD=1.2343;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,114,2720	0/1:6,0:6:24.94:25,0,214	0/0:26,0:17:24.15:0,24,440	0/0:26,0:16:35.85:0,36,718	0/0:22,0:22:54.13:0,54,1174	0/1:19,1:20:0.47:0,0,1166	0/0:31,1:32:54.69:0,55,1817	0/0:25,0:25:66.22:0,66,1559	0/0:32,0:32:75.18:0,75,1722	0/0:39,1:40:34.78:0,35,2176	0/0:19,0:19:41.94:0,42,780	0/0:34,0:34:67.70:0,68,1844	0/0:34,0:34:65.40:0,65,1669	0/1:6,0:6:9.71:10,0,18	0/0:32,0:32:66.17:0,66,1634	0/0:22,0:22:10.44:0,10,969	0/0:23,0:23:24.34:0,24,620	0/0:18,0:18:7.07:0,7,540	0/0:3,0:2:2.93:0,3,19	0/1:13,0:13:43.43:43,0,47	1/1:15,0:15:3.41:66,3,0	0/0:26,0:27:56.86:0,57,1547	0/0:20,0:20:39.02:0,39,883	0/0:28,0:28:31.86:0,32,1573	0/1:20,1:21:27.10:27,0,951	0/0:35,0:35:82.35:0,82,2493	0/1:5,0:5:10.39:27,0,10	0/0:10,0:10:14.77:0,15,464
chr10	47271353	.	CCTTT	C	1552.69	PASS	AB=0.905;AC=15;AF=0.268;AN=56;BaseQRankSum=5.566;DP=607;FS=23.567;HRun=0;HaplotypeScore=227.3830;InbreedingCoeff=-0.3784;MQ=47.82;MQ0=6;MQRankSum=-3.741;QD=4.55;ReadPosRankSum=-4.520;VQSLOD=0.4996;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,132,2988	0/1:1,5:6:68.58:105,0,69	0/0:24,0:17:35.94:0,36,751	0/0:25,0:13:36:0,36,724	0/1:18,1:19:29.80:30,0,820	0/1:13,0:13:68.98:69,0,348	0/0:35,0:34:17.71:0,18,1545	0/1:15,4:19:70.28:70,0,861	0/0:28,0:28:11.64:0,12,546	0/1:22,14:36:99:450,0,952	0/1:16,0:16:3.06:3,0,676	0/1:31,0:31:49.25:49,0,956	0/0:29,0:29:16.58:0,17,1098	0/0:5,0:5:12.03:0,12,162	0/0:27,0:27:26.66:0,27,894	0/1:25,0:25:41.84:42,0,449	0/1:26,0:26:99:101,0,248	0/1:20,1:21:99:214,0,290	0/0:3,0:1:2.92:0,3,17	0/0:15,0:15:34.04:0,34,300	0/1:11,0:11:44.10:138,0,44	0/1:33,0:32:23.62:24,0,1081	0/0:17,0:15:23.18:0,23,415	0/1:26,0:26:51.07:51,0,863	0/1:20,10:30:99:215,0,440	0/1:23,6:29:99:146,0,1225	0/0:7,0:7:7.91:0,8,119	0/0:4,0:4:9.03:0,9,191
chr10	47271372	.	C	CCCTT	4057.34	PASS	AB=0.966;AC=19;AF=0.339;AN=56;BaseQRankSum=3.904;DP=652;FS=16.500;HRun=0;HaplotypeScore=259.7669;InbreedingCoeff=-0.3926;MQ=46.30;MQ0=7;MQRankSum=-9.119;QD=9.22;ReadPosRankSum=4.393;VQSLOD=1.2910;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,129,2019	0/0:11,0:11:3.37:0,3,201	0/0:28,0:14:32.75:0,33,398	0/0:31,0:19:29.12:0,29,404	0/1:20,1:21:99:334,0,191	0/0:16,0:16:25.34:0,25,433	0/0:35,0:34:28.23:0,28,712	0/1:20,1:21:99:139,0,472	0/1:25,0:25:10.96:11,0,430	0/1:37,0:37:99:333,0,618	0/1:20,0:20:99:301,0,151	0/1:31,0:31:99:454,0,542	0/1:26,0:26:99:265,0,397	0/0:11,0:11:27.04:0,27,402	0/1:25,2:27:99:399,0,192	0/1:24,0:24:99:101,0,311	0/1:11,14:28:99:128,0,317	0/1:26,0:26:99:164,0,510	0/0:9,0:8:23.09:0,23,314	0/1:23,0:23:40.18:40,0,322	0/0:15,0:17:12.80:0,13,482	0/1:38,0:37:99:473,0,427	0/1:13,0:11:72.53:92,0,73	0/1:24,0:24:99:141,0,278	0/1:31,0:31:99:338,0,173	0/1:21,1:22:99:290,0,308	0/0:6,0:6:15.05:0,15,269	1/1:3,0:3:5.88:55,6,0
chr10	47271376	.	TCCTC	T	2133.36	PASS	AB=0.819;AC=17;AF=0.304;AN=56;BaseQRankSum=3.161;DP=664;FS=3.323;HRun=0;HaplotypeScore=253.9674;InbreedingCoeff=-0.2767;MQ=49.13;MQ0=7;MQRankSum=-5.503;QD=5.51;ReadPosRankSum=2.845;VQSLOD=2.5067;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,129,2957	0/0:10,0:10:19.14:0,19,329	0/0:34,0:17:27.50:0,28,589	0/0:36,0:21:46.09:0,46,612	0/1:17,4:21:99:205,0,397	0/0:16,0:16:38.68:0,39,768	0/0:36,0:35:92.41:0,92,1229	0/1:22,0:22:43.74:44,0,828	0/1:18,7:25:0.52:1,0,1012	0/1:36,2:38:99:137,0,1099	0/1:8,10:18:99:164,0,302	0/1:27,5:32:99:277,0,1129	0/1:15,10:25:99:220,0,783	0/0:11,0:11:32.70:0,33,703	0/1:17,14:31:99:266,0,548	0/1:16,8:24:99:108,0,894	0/0:30,0:30:18.71:0,19,675	0/1:15,12:27:99:128,0,799	0/0:9,0:8:24.07:0,24,537	0/0:21,0:21:45.09:0,45,726	0/0:19,0:19:18.88:0,19,859	0/1:29,6:34:99:370,0,907	0/1:6,7:11:66.78:67,0,258	0/1:23,0:23:38.37:38,0,531	0/1:25,2:28:99:146,0,425	0/1:22,1:23:86.01:86,0,585	0/0:6,0:6:18.06:0,18,447	1/1:2,0:2:5.84:35,6,0
chr10	47271488	.	T	TCCCC	4305.91	PASS	AB=0.797;AC=23;AF=0.411;AN=56;BaseQRankSum=3.390;DP=400;FS=54.345;HRun=1;HaplotypeScore=162.5821;InbreedingCoeff=-0.7038;MQ=42.67;MQ0=4;MQRankSum=-8.089;QD=12.78;ReadPosRankSum=6.434;VQSLOD=-0.6942;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:11,9:20:99:226,0,423	0/1:5,1:6:66.48:66,0,175	0/0:9,0:3:9.03:0,9,121	0/0:14,0:7:12.76:0,13,262	0/1:12,6:18:26.43:26,0,162	0/1:9,6:15:99:262,0,462	0/1:11,4:15:99:237,0,307	0/1:7,3:10:99:233,0,265	0/1:12,3:15:99:224,0,449	0/1:16,11:27:99:851,0,582	0/1:19,2:21:46.95:47,0,645	0/1:5,2:7:99:129,0,184	0/1:7,4:11:99:134,0,343	0/1:7,2:9:20:20,0,190	0/1:10,6:16:99:230,0,367	0/1:13,3:16:99:182,0,653	0/1:11,0:11:2.19:2,0,349	0/1:9,1:10:62.79:63,0,330	0/0:7,0:7:2.64:0,3,284	0/1:9,1:10:27.39:27,0,385	0/0:17,0:17:36.06:0,36,532	0/1:12,7:22:65.09:65,0,304	0/1:16,7:23:99:246,0,567	0/0:16,0:16:21.03:0,21,351	0/1:13,6:19:99:354,0,546	0/1:8,6:14:99:486,0,196	0/1:11,4:15:99:133,0,460	0/1:6,1:7:62.81:63,0,296
chr10	47271875	.	C	CT	121.19	PASS	AC=12;AF=0.545;AN=22;BaseQRankSum=-2.166;DP=21;FS=11.761;HRun=0;HaplotypeScore=11.4024;InbreedingCoeff=0.3413;MQ=100.87;MQ0=1;MQRankSum=-2.166;QD=13.47;ReadPosRankSum=-2.166;VQSLOD=2.0377;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:0,1:1:0:0,0,0	./.	0/0:2,0:2:2.80:0,3,13	0/0:3,0:2:6.02:0,6,72	1/1:0,1:1:2.97:20,3,0	./.	./.	./.	./.	./.	1/1:0,1:1:3.01:37,3,0	1/1:0,1:1:3.01:36,3,0	1/1:0,1:1:2.97:20,3,0	./.	./.	./.	0/0:0,1:1:0:0,0,0	./.	./.	./.	1/1:1,2:3:3.01:36,3,0	./.	./.	0/0:0,1:1:0:0,0,0	./.	1/1:0,2:2:5.99:57,6,0	./.	./.
chr10	47275483	.	GAT	G	259.60	PASS	AB=0.893;AC=13;AF=0.232;AN=56;BaseQRankSum=7.837;DP=507;FS=26.721;HRun=0;HaplotypeScore=147.6084;InbreedingCoeff=-0.0834;MQ=45.77;MQ0=26;MQRankSum=-3.064;QD=1.48;ReadPosRankSum=1.993;VQSLOD=1.1997;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:43:87.22:0,87,1762	0/0:7,0:7:14.26:0,14,244	0/0:16,0:3:5.95:0,6,51	0/0:19,0:5:9.49:0,9,127	0/0:8,0:8:4.27:0,4,13	0/0:25,0:23:47.26:0,47,664	0/0:26,0:22:39.68:0,40,669	0/0:32,0:29:58.75:0,59,637	0/1:11,2:13:30.35:30,0,135	0/0:16,0:11:13.13:0,13,119	0/1:8,0:8:18.51:19,0,19	0/1:21,6:26:73.66:90,0,74	0/1:14,3:17:4.51:5,0,134	0/1:21,0:21:8.38:8,0,220	0/0:22,0:22:33.61:0,34,654	0/1:13,1:12:17.20:17,0,92	0/1:13,1:14:29.56:32,0,30	0/1:8,2:9:32.46:37,0,32	0/0:24,0:21:41.94:0,42,490	0/0:17,0:16:3.87:0,4,215	0/0:36,0:33:39.19:0,39,335	0/0:10,1:10:7.59:0,8,68	0/0:11,0:8:8.47:0,8,45	0/1:16,0:13:3.05:3,0,61	1/1:13,3:14:10.19:86,10,0	0/1:6,2:7:6.69:43,0,7	0/0:18,0:18:2.43:0,2,224	0/1:8,3:8:5.37:36,0,5
chr10	47275486	.	GAT	G	963.18	PASS	AB=0.891;AC=18;AF=0.321;AN=56;BaseQRankSum=5.479;DP=499;FS=52.202;HRun=0;HaplotypeScore=146.0068;InbreedingCoeff=-0.2055;MQ=43.86;MQ0=26;MQRankSum=1.548;QD=3.44;ReadPosRankSum=2.288;VQSLOD=1.0649;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:42:80.35:0,80,1665	0/0:7,0:7:14.25:0,14,244	0/0:13,0:2:4.83:0,5,38	0/0:15,0:4:9.50:0,10,136	0/1:9,0:9:0.61:40,0,1	0/0:26,0:24:44.25:0,44,626	0/0:27,0:23:39.63:0,40,670	0/0:34,0:31:64.47:0,64,629	0/1:12,0:14:9.56:10,0,120	0/0:15,0:10:7.23:0,7,91	0/0:7,0:7:2.85:0,3,20	0/1:21,0:26:56.79:131,0,57	0/1:15,1:18:4.93:5,0,145	0/1:14,5:19:53.10:172,0,53	0/0:21,0:21:50.57:0,51,720	0/1:13,0:12:16.85:17,0,72	0/1:13,0:14:16.70:40,0,17	0/1:8,0:9:23.27:31,0,23	0/1:21,0:19:55.70:56,0,298	0/1:16,1:16:50.93:89,0,51	0/1:37,2:34:79.27:173,0,79	0/1:10,0:10:13.60:14,0,28	0/0:11,0:8:6.52:0,7,30	0/1:14,0:11:1.11:1,0,57	1/1:14,0:15:10.49:86,10,0	0/1:6,0:7:6.27:45,0,6	0/1:13,4:17:70.57:117,0,71	0/1:8,0:8:1.79:91,0,2
chr10	47275493	.	ATGG	A	523.31	PASS	AB=1.000;AC=14;AF=0.269;AN=52;BaseQRankSum=0.791;DP=466;FS=4.225;HRun=0;HaplotypeScore=151.9013;InbreedingCoeff=0.5808;MQ=42.13;MQ0=28;MQRankSum=1.067;QD=4.09;ReadPosRankSum=5.692;VQSLOD=2.3063;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:37:41.75:0,42,641	0/0:7,0:7:12.46:0,12,78	./.	0/1:12,0:2:0:0,0,0	./.	1/1:12,13:23:19.79:264,20,0	1/1:25,2:23:3.37:178,3,0	0/0:28,0:24:19.90:0,20,111	0/0:13,0:13:31.70:0,32,266	0/0:12,0:8:3.41:0,3,19	0/1:5,0:5:0.07:0,0,0	0/0:29,0:28:29.41:0,29,174	0/0:20,0:20:31.03:0,31,255	0/0:19,0:19:8.91:0,9,104	0/0:18,0:18:24.60:0,25,208	0/0:15,0:13:17.01:0,17,166	0/0:11,0:10:6.24:0,6,34	1/1:9,0:8:10.08:73,10,0	0/0:22,0:19:11.68:0,12,71	0/0:14,0:13:10.57:0,11,86	0/0:34,0:30:23.64:0,24,211	0/0:12,0:11:13.25:0,13,74	0/0:9,0:6:4.17:0,4,42	0/1:15,0:12:10.37:10,0,12	1/1:17,0:14:5.62:56,6,0	1/1:9,0:8:7.56:59,8,0	0/0:19,0:19:21.33:0,21,165	0/1:9,0:5:9:35,0,9
chr10	47275520	.	G	GTGA	861.49	PASS	AB=0.978;AC=24;AF=0.444;AN=54;BaseQRankSum=-0.181;DP=470;FS=5.452;HRun=0;HaplotypeScore=160.2914;InbreedingCoeff=-0.0395;MQ=36.97;MQ0=42;MQRankSum=-3.945;QD=2.76;ReadPosRankSum=2.658;VQSLOD=1.6415;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:31:72.12:0,72,1066	0/0:7,0:6:2.79:0,3,28	0/0:6,0:1:3.01:0,3,48	0/1:14,0:5:4.57:5,0,12	0/1:8,0:7:0:0,0,0	0/0:18,0:15:28.03:0,28,241	0/0:26,0:23:46.24:0,46,476	0/0:30,0:23:1.41:0,1,230	0/1:13,1:14:27.56:99,0,28	0/1:20,0:15:11.40:11,0,49	1/1:10,0:7:2.65:9,3,0	0/1:11,5:15:10.69:190,0,11	1/1:19,5:24:5.21:196,5,0	0/1:17,0:17:17.67:18,0,64	0/1:18,0:18:84.50:90,0,85	0/1:17,0:15:6.83:54,0,7	0/1:14,0:13:5.38:5,0,13	0/1:14,0:12:2.51:3,0,66	0/1:20,0:10:10.36:10,0,15	1/1:19,0:16:7:102,7,0	1/1:30,0:20:2.50:57,3,0	1/1:12,2:13:1.35:20,1,0	./.	0/1:16,0:13:4.01:6,0,4	0/1:11,0:9:2.42:2,0,27	0/0:12,0:7:8.55:0,9,42	0/1:16,0:16:1.75:126,0,2	0/0:15,0:11:5.30:0,5,81
chr10	47275526	.	GTGA	G	2095.68	PASS	AB=0.827;AC=19;AF=0.339;AN=56;BaseQRankSum=0.927;DP=482;FS=6.879;HRun=0;HaplotypeScore=150.2518;InbreedingCoeff=-0.1713;MQ=36.53;MQ0=42;MQRankSum=-6.388;QD=8.38;ReadPosRankSum=-3.243;VQSLOD=2.2111;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:29:23.50:0,23,1412	0/0:9,0:8:9.03:0,9,138	0/0:11,0:5:14.62:0,15,144	0/0:18,1:6:11.12:0,11,177	1/1:4,6:9:8.92:105,9,0	0/0:18,0:15:1.49:0,1,190	0/0:27,0:25:35.41:0,35,378	0/0:30,0:22:53.89:0,54,878	0/1:7,4:11:99:174,0,151	0/1:18,2:15:99:166,0,110	1/1:7,3:7:8.05:98,8,0	0/1:14,2:15:99:127,0,141	0/1:15,7:22:59.71:341,0,60	0/1:17,0:17:5.57:6,0,165	0/0:18,0:18:43.66:0,44,677	0/1:6,10:14:15.85:407,0,16	0/1:14,1:14:93.84:94,0,154	0/1:12,2:12:99:124,0,121	0/1:21,0:10:14.25:14,0,173	0/0:21,0:18:11.98:0,12,225	0/0:30,0:19:31.36:0,31,241	0/1:9,7:14:28.89:96,0,29	0/1:7,2:6:0:0,0,0	0/1:14,3:14:9.68:83,0,10	0/1:7,2:8:48.26:55,0,48	0/1:8,5:8:12.07:204,0,12	0/0:16,0:16:31.44:0,31,207	0/1:10,4:10:85.04:164,0,85
chr10	47275529	.	A	ATGG	2743.71	PASS	AB=0.927;AC=22;AF=0.393;AN=56;BaseQRankSum=1.765;DP=490;FS=2.310;HRun=0;HaplotypeScore=152.5318;InbreedingCoeff=-0.0800;MQ=36.81;MQ0=40;MQRankSum=-5.108;QD=9.80;ReadPosRankSum=-1.351;VQSLOD=3.1865;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:32:44.91:0,45,1214	0/0:10,0:9:8.99:0,9,109	0/0:15,0:6:12.63:0,13,119	0/0:21,0:8:17.10:0,17,252	1/1:11,0:10:11.96:132,12,0	0/0:17,0:14:23.64:0,24,272	0/0:27,0:25:57.68:0,58,585	0/0:31,0:21:53.92:0,54,837	0/1:11,1:12:99:198,0,110	0/1:17,3:17:99:337,0,104	1/1:8,2:7:6.34:126,6,0	0/1:11,5:15:99:220,0,110	0/1:15,5:20:54.14:436,0,54	0/1:17,0:17:25.39:25,0,96	0/0:20,0:20:43.13:0,43,522	1/1:16,0:14:6.91:326,7,0	0/1:17,1:17:99:169,0,127	0/1:12,2:12:99:148,0,117	0/1:20,0:10:29.29:29,0,136	0/0:20,0:17:1.51:0,2,151	0/1:28,0:18:6.89:7,0,93	1/1:14,2:14:3.06:92,3,0	0/1:9,0:6:0:0,0,0	0/1:17,0:14:9.68:65,0,10	0/1:9,0:8:48.25:71,0,48	0/1:10,2:8:11.18:293,0,11	0/0:13,0:13:11.77:0,12,76	0/1:14,1:11:41.22:235,0,41
chr10	47275544	.	ATGG	A	1648.64	PASS	AB=0.802;AC=6;AF=0.107;AN=56;BaseQRankSum=-4.571;DP=548;FS=16.341;HRun=0;HaplotypeScore=170.9451;InbreedingCoeff=0.6746;MQ=41.33;MQ0=31;MQRankSum=-2.098;QD=19.17;ReadPosRankSum=0.386;VQSLOD=2.4698;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:30:84.24:0,84,1769	1/1:1,10:10:15.05:241,15,0	0/0:31,0:11:30.03:0,30,461	0/0:34,0:13:39.13:0,39,730	0/0:15,0:13:21:0,21,376	0/1:16,0:14:2.79:3,0,187	0/0:25,0:23:11.02:0,11,188	0/1:13,25:24:4.96:685,0,5	0/0:17,0:17:46.03:0,46,807	0/0:20,0:17:33.58:0,34,646	0/0:12,0:10:13.64:0,14,251	0/0:21,0:21:49.52:0,50,866	0/0:21,0:21:51.14:0,51,822	0/0:18,0:18:48.11:0,48,923	1/1:1,20:21:51.17:848,51,0	0/0:18,0:16:42.14:0,42,689	0/0:16,0:15:24.07:0,24,444	0/0:14,0:12:20.92:0,21,266	0/0:18,0:13:28.74:0,29,524	0/0:22,0:19:39.07:0,39,774	0/0:28,0:22:53.76:0,54,1138	0/0:21,0:19:41.97:0,42,741	0/0:11,0:8:11.97:0,12,220	0/0:19,0:16:14.83:0,15,158	0/0:7,0:7:9.03:0,9,169	0/0:10,0:6:18.05:0,18,317	0/0:14,0:14:36.04:0,36,741	0/0:19,0:16:38.05:0,38,616
chr10	47275550	.	ATGG	A	328.81	PASS	AB=0.909;AC=6;AF=0.107;AN=56;BaseQRankSum=-0.603;DP=561;FS=18.170;HRun=0;HaplotypeScore=178.2595;InbreedingCoeff=0.2103;MQ=47.64;MQ0=28;MQRankSum=-6.066;QD=2.99;ReadPosRankSum=0.694;VQSLOD=1.0001;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:84.26:0,84,1769	0/1:13,0:12:29.51:30,0,71	0/0:36,0:15:45.15:0,45,720	0/0:39,0:18:54.01:0,54,882	0/0:15,0:13:21.02:0,21,411	0/1:13,4:15:54.18:54,0,112	0/1:19,5:22:16.26:147,0,16	0/1:34,0:23:88.20:88,0,119	0/0:16,0:16:48.15:0,48,902	0/0:20,0:17:36.58:0,37,680	0/0:13,0:11:16.66:0,17,352	0/0:21,0:21:57.13:0,57,967	0/0:22,0:22:52:0,52,908	0/0:19,0:19:44.18:0,44,890	1/1:22,0:22:8.78:135,9,0	0/0:18,0:16:42.14:0,42,830	0/0:14,0:13:24.05:0,24,470	0/0:14,0:12:20.99:0,21,281	0/0:17,0:14:36.12:0,36,673	0/0:27,0:24:50.12:0,50,873	0/0:30,0:24:63.09:0,63,1209	0/0:20,0:19:45.14:0,45,846	0/0:13,0:10:14.98:0,15,263	0/0:18,0:15:18.06:0,18,273	0/0:7,0:7:9.03:0,9,171	0/0:10,0:7:20.99:0,21,351	0/0:15,0:15:41.71:0,42,759	0/0:18,0:15:35.01:0,35,573
chr10	47275582	.	G	GTGA	12210.74	PASS	AB=0.581;AC=39;AF=0.696;AN=56;BaseQRankSum=3.715;DP=534;FS=9.369;HRun=0;HaplotypeScore=131.0602;InbreedingCoeff=0.9393;MQ=60.80;MQ0=1;MQRankSum=-4.065;QD=35.50;ReadPosRankSum=5.731;VQSLOD=5.1327;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:32:81.21:0,81,1176	0/0:11,0:11:24.08:0,24,368	0/0:32,0:25:54.02:0,54,682	0/0:26,0:21:29.80:0,30,468	1/1:3,10:13:17.05:413,17,0	0/0:19,0:18:44.46:0,44,662	0/0:23,0:22:45.02:0,45,644	0/0:27,0:23:60.18:0,60,871	1/1:2,15:17:42.14:839,42,0	1/1:6,12:18:28.27:532,28,0	1/1:4,8:11:18.05:359,18,0	0/1:7,17:25:1.65:959,0,2	1/1:7,11:18:36.12:710,36,0	1/1:6,12:18:30.57:599,31,0	0/0:19,0:19:39.12:0,39,571	1/1:6,9:16:27.09:538,27,0	1/1:4,12:16:27.09:538,27,0	1/1:3,12:15:24.08:481,24,0	1/1:10,9:18:31.45:568,31,0	1/1:4,21:25:51.16:1013,51,0	1/1:6,13:18:40.02:780,40,0	1/1:6,15:22:42.01:828,42,0	1/1:3,12:16:27.09:532,27,0	1/1:5,13:18:27.09:512,27,0	1/1:2,4:7:12.04:239,12,0	1/1:5,9:13:30.10:573,30,0	1/1:7,8:16:26.57:540,27,0	1/1:4,11:14:33.58:658,34,0
chr10	47276213	.	A	ACAGT	24090.69	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-11.754;DP=602;FS=9.456;HRun=0;HaplotypeScore=89.0455;InbreedingCoeff=0.9744;MQ=88.42;MQ0=3;MQRankSum=-6.921;QD=52.60;ReadPosRankSum=5.222;VQSLOD=5.8130;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,108,1866	0/0:5,0:5:15.05:0,15,265	0/0:22,0:22:60.21:0,60,1049	0/0:25,0:25:62.99:0,63,996	1/1:9,15:22:36.12:922,36,0	1/1:6,18:24:54.19:1385,54,0	1/1:6,15:21:45.15:1153,45,0	0/0:28,0:28:69.24:0,69,1218	1/1:1,13:14:36.12:924,36,0	1/1:9,15:25:57.18:1312,57,0	1/1:4,9:13:27.02:690,27,0	1/1:3,23:27:63.22:1616,63,0	1/1:8,13:21:39.13:1000,39,0	1/1:8,19:27:60.16:1481,60,0	0/0:25,0:25:69.24:0,69,1215	1/1:1,10:11:30.10:770,30,0	1/1:7,33:40:81.28:2079,81,0	1/1:5,21:26:51.17:1260,51,0	1/1:8,9:17:24.08:599,24,0	1/1:3,12:17:33.11:846,33,0	1/1:8,23:32:72.25:1840,72,0	1/1:2,9:13:30.10:761,30,0	1/1:3,8:11:24.08:607,24,0	1/1:5,16:21:33.11:847,33,0	1/1:5,17:22:45.15:1154,45,0	1/1:9,16:25:48.16:1232,48,0	1/1:3,19:22:57.20:1461,57,0	1/1:1,3:3:6.02:154,6,0
chr10	47278091	.	G	GAA	2969.71	PASS	AB=0.863;AC=49;AF=0.875;AN=56;BaseQRankSum=4.718;DP=389;FS=7.927;HRun=15;HaplotypeScore=178.1826;InbreedingCoeff=0.3449;MQ=48.12;MQ0=5;MQRankSum=-3.801;QD=8.23;ReadPosRankSum=-1.339;VQSLOD=0.3090;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:28:41.06:0,41,316	1/1:3,0:2:5.37:34,5,0	0/1:7,0:4:0:0,0,0	0/1:4,0:2:11.55:12,0,15	1/1:18,0:16:13.63:70,14,0	1/1:13,0:13:25.76:219,26,0	1/1:9,0:9:9.01:97,9,0	1/1:18,0:15:7.83:91,8,0	1/1:11,4:17:20.32:196,20,0	1/1:15,0:14:23.90:150,24,0	1/1:23,0:23:23.86:192,24,0	0/1:7,10:17:14.74:67,0,15	1/1:10,7:20:16.66:117,17,0	1/1:11,0:10:15.51:137,16,0	1/1:7,0:6:10.82:87,11,0	1/1:4,6:10:11.52:122,12,0	1/1:16,0:15:20.31:143,20,0	0/1:6,0:6:0:0,0,0	1/1:10,0:10:12:110,12,0	1/1:16,0:15:18.42:160,18,0	1/1:5,0:5:3.46:25,3,0	1/1:7,4:14:13.74:109,14,0	0/1:11,7:22:2.71:198,0,3	1/1:5,3:17:18.50:136,19,0	1/1:12,0:12:20.65:152,21,0	1/1:20,0:20:32.93:207,33,0	1/1:15,0:12:17.96:162,18,0	1/1:15,0:14:18.01:102,18,0
chr10	47278465	.	C	CT	695.09	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-2.431;DP=543;FS=0.000;HRun=1;HaplotypeScore=101.7931;InbreedingCoeff=0.9847;MQ=69.52;MQ0=1;MQRankSum=0.055;QD=18.79;ReadPosRankSum=1.576;VQSLOD=3.8535;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:27.09:0,27,350	0/0:12,0:12:31.24:0,31,199	0/0:17,0:16:41.03:0,41,448	0/0:9,0:8:21.83:0,22,231	0/0:27,0:27:55.82:0,56,375	1/1:2,17:19:27.25:414,27,0	1/1:5,13:18:15.39:399,15,0	0/0:26,0:26:71.39:0,71,626	0/0:17,0:17:32.25:0,32,230	0/0:36,0:36:76.42:0,76,685	0/0:21,0:21:41.06:0,41,241	0/0:11,0:11:26.93:0,27,151	0/0:17,0:17:25.01:0,25,125	0/0:12,0:12:22.24:0,22,141	0/0:30,0:30:76.28:0,76,496	0/0:15,0:15:27.06:0,27,191	0/0:28,0:28:73.73:0,74,479	0/0:20,0:20:50.23:0,50,364	0/0:11,0:11:31.10:0,31,206	0/0:23,0:23:44.77:0,45,376	0/0:15,0:15:30.88:0,31,164	0/0:17,0:17:34.43:0,34,237	0/0:22,0:22:50.92:0,51,358	0/0:13,0:13:28.75:0,29,168	0/0:16,0:16:42.10:0,42,293	0/0:28,0:28:65.19:0,65,520	0/0:22,0:22:35.48:0,35,186	0/0:28,0:28:77.43:0,77,486
chr10	47278467	.	A	AT	12812.30	PASS	AB=1.000;AC=51;AF=0.911;AN=56;BaseQRankSum=-5.759;DP=558;FS=0.724;HRun=9;HaplotypeScore=61.7380;InbreedingCoeff=0.7788;MQ=69.23;MQ0=1;MQRankSum=-3.071;QD=24.27;ReadPosRankSum=2.035;VQSLOD=5.6996;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:23.97:0,24,208	1/1:1,11:12:30.08:332,30,0	0/0:17,0:16:23.57:0,24,181	0/1:10,0:8:6.75:7,0,74	1/1:3,23:27:66.09:695,66,0	1/1:20,0:20:30.34:441,30,0	1/1:19,0:19:18.58:425,19,0	1/1:8,18:26:51.11:552,51,0	1/1:5,13:18:10.04:338,10,0	1/1:7,30:37:87.04:922,87,0	1/1:2,19:21:51.06:537,51,0	1/1:1,12:13:33.09:365,33,0	1/1:1,14:15:39.11:431,39,0	1/1:4,10:14:27.07:297,27,0	1/1:4,28:32:79.42:852,79,0	1/1:3,12:15:10.04:339,10,0	1/1:4,24:28:72.19:796,72,0	1/1:5,16:21:44.61:473,45,0	1/1:2,13:15:33.98:367,34,0	1/1:3,18:22:48:513,48,0	1/1:0,16:16:33.09:365,33,0	1/1:4,13:17:36.06:382,36,0	1/1:5,17:22:44.94:496,45,0	1/1:1,14:15:33.09:365,33,0	1/1:4,12:16:13.07:372,13,0	1/1:6,22:28:52.25:782,52,0	1/1:3,18:21:31.10:571,31,0	1/1:4,24:28:72.19:796,72,0
chr10	47278592	.	GATCT	G	828.11	PASS	AB=1.000;AC=19;AF=0.352;AN=54;BaseQRankSum=0.734;DP=594;FS=39.314;HRun=0;HaplotypeScore=227.5209;InbreedingCoeff=0.0380;MQ=67.11;MQ0=3;MQRankSum=-1.202;QD=2.65;ReadPosRankSum=-4.378;VQSLOD=0.2282;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:30:5.38:0,5,50	1/1:3,5:8:15.05:234,15,0	./.	0/0:21,0:21:0:0,0,0	0/0:27,0:27:7.12:0,7,52	1/1:19,0:19:2.89:19,3,0	0/0:12,0:12:6.01:0,6,61	1/1:26,0:25:3.01:40,3,0	0/1:24,0:24:29.62:57,0,30	0/0:39,0:39:41.97:0,42,336	0/0:16,0:16:7.51:0,8,48	0/1:30,0:28:10.15:10,0,35	0/1:20,0:19:15.18:30,0,15	0/0:21,0:21:0.36:0,0,1	1/1:11,18:29:30.10:467,30,0	0/1:18,0:18:16.13:29,0,16	0/0:9,0:9:8.82:0,9,79	0/1:16,0:16:11.10:11,0,55	0/1:16,0:16:20.33:20,0,42	0/0:35,0:35:8.38:0,8,111	0/1:18,0:18:0:0,0,0	0/1:21,0:21:19.59:20,0,77	0/1:11,0:11:0:0,0,0	0/0:17,0:17:0.41:0,0,1	0/0:16,0:15:2.92:0,3,17	0/1:32,0:32:17.50:17,0,187	0/1:25,0:25:18.25:18,0,83	0/0:20,0:19:6.09:0,6,29
chr10	47278629	.	ATC	A	1995.38	PASS	AB=0.807;AC=18;AF=0.321;AN=56;BaseQRankSum=6.567;DP=655;FS=9.455;HRun=0;HaplotypeScore=329.4256;InbreedingCoeff=-0.4847;MQ=39.10;MQ0=8;MQRankSum=-5.031;QD=4.73;ReadPosRankSum=5.315;VQSLOD=1.3819;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,1:37:33.11:0,33,509	0/1:8,0:8:7.90:8,0,32	0/0:8,0:3:8.99:0,9,99	0/0:10,0:6:11.24:0,11,114	0/1:20,12:31:9.04:9,0,149	0/1:13,4:17:14.41:14,0,112	0/1:7,4:11:75.22:75,0,144	0/0:33,0:32:88.53:0,89,1232	0/1:22,10:32:36.43:36,0,155	0/1:29,11:39:99:451,0,723	0/0:17,11:28:14.27:0,14,211	0/1:26,7:31:56.30:56,0,142	0/1:18,9:26:61.35:61,0,87	0/1:15,7:21:58.81:59,0,75	0/1:29,0:29:4.06:4,0,206	0/1:12,7:19:15.86:16,0,109	0/1:15,1:15:34.33:34,0,76	0/1:19,2:21:93.90:94,0,445	0/1:10,2:12:78.93:79,0,205	0/0:38,11:49:15.27:0,15,477	0/0:13,2:15:3.25:0,3,43	0/1:16,9:25:9.25:9,0,254	0/0:12,10:22:0.14:0,0,2	0/0:16,1:17:5.76:0,6,82	0/0:9,5:13:3.01:0,3,48	0/1:23,13:36:99:655,0,483	0/1:18,12:29:99:334,0,382	0/1:8,4:11:85.31:149,0,85
chr10	47278631	.	C	CTA	2796.79	PASS	AB=0.918;AC=23;AF=0.411;AN=56;BaseQRankSum=6.776;DP=672;FS=7.686;HRun=0;HaplotypeScore=337.7135;InbreedingCoeff=-0.2036;MQ=40.30;MQ0=8;MQRankSum=-6.289;QD=6.05;ReadPosRankSum=-0.464;VQSLOD=1.9486;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:5.37:0,5,377	0/0:8,0:8:17.93:0,18,152	0/0:10,0:5:8.99:0,9,99	0/0:11,0:7:9.02:0,9,107	1/1:26,5:31:8.13:54,8,0	0/1:16,1:17:9.94:10,0,107	0/1:12,0:12:75.72:76,0,110	0/0:32,0:31:90.26:0,90,1242	0/1:29,3:32:21.65:22,0,170	0/1:37,5:41:99:829,0,104	0/1:26,2:28:7.06:7,0,59	0/1:27,7:32:52:52,0,99	0/1:25,2:27:52.27:52,0,96	0/1:20,3:22:55.31:59,0,55	0/0:28,0:28:44.88:0,45,432	0/1:21,1:22:46.93:47,0,100	0/1:13,2:15:13.23:54,0,13	0/1:19,2:21:99:99,0,179	0/1:13,1:14:99:121,0,139	0/0:50,1:51:4.89:0,5,255	0/0:13,2:16:0.06:0,0,1	0/1:24,2:26:0.55:1,0,165	1/1:23,1:24:3.33:27,3,0	0/0:16,1:17:5.65:0,6,75	1/1:14,2:15:1.21:3,1,0	0/1:31,5:36:99:894,0,147	0/1:27,1:27:99:330,0,281	1/1:10,0:9:23.63:218,24,0
chr10	47278632	.	T	TATC	2259.58	PASS	AB=0.967;AC=12;AF=0.214;AN=56;BaseQRankSum=5.676;DP=678;FS=16.403;HRun=0;HaplotypeScore=353.2855;InbreedingCoeff=-0.0219;MQ=41.56;MQ0=8;MQRankSum=-7.109;QD=8.83;ReadPosRankSum=3.951;VQSLOD=1.8937;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:36,0:36:11.82:12,0,422	0/0:8,0:8:18.03:0,18,193	0/0:11,0:6:12.92:0,13,168	0/0:10,0:6:15.03:0,15,173	0/1:30,1:32:8.58:118,0,9	0/0:17,0:17:14.85:0,15,105	0/0:12,0:12:3.58:0,4,87	0/0:32,0:31:90.30:0,90,1342	0/0:32,0:32:14.12:0,14,118	0/1:38,5:42:99:915,0,158	0/1:25,1:27:36.59:103,0,37	0/0:37,0:35:10.63:0,11,102	0/0:28,0:27:15.46:0,15,140	0/0:23,0:22:6.32:0,6,61	0/0:27,0:27:45.10:0,45,524	0/0:21,0:21:19.31:0,19,148	1/1:14,2:15:4.15:103,4,0	0/1:19,1:21:99:157,0,161	0/1:15,0:15:39.73:40,0,142	0/0:50,0:50:1.35:0,1,213	0/0:17,0:17:1.69:0,2,24	0/0:27,0:27:17.16:0,17,111	0/0:24,0:24:7.06:0,7,45	0/0:17,0:17:5.94:0,6,66	1/1:15,1:15:2.93:51,3,0	0/1:34,2:38:99:730,0,108	0/0:29,0:28:12.56:0,13,258	0/1:10,0:9:23.77:175,0,24
chr10	47278666	.	GTATC	G	17438.46	PASS	AB=0.658;AC=33;AF=0.589;AN=56;BaseQRankSum=1.789;DP=737;FS=6.195;HRun=0;HaplotypeScore=319.3471;InbreedingCoeff=0.1984;MQ=56.89;MQ0=0;MQRankSum=-5.240;QD=29.51;ReadPosRankSum=2.121;VQSLOD=3.5903;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:34:68.01:0,68,1787	0/0:9,0:9:24.07:0,24,533	0/0:17,0:17:28.28:0,28,595	0/0:19,0:16:26.81:0,27,446	1/1:8,24:32:50.77:884,51,0	1/1:6,21:27:38.14:899,38,0	0/1:3,6:9:30.86:251,0,31	0/0:38,0:38:93.29:0,93,2070	0/1:16,22:38:4.84:1158,0,5	0/1:11,30:40:45.98:1457,0,46	0/1:9,11:20:27.15:302,0,27	1/1:12,25:36:53.19:1168,53,0	0/1:10,20:30:36.53:902,0,37	1/1:6,15:20:32.76:586,33,0	0/0:28,0:28:69.24:0,69,1729	1/1:6,21:27:25.05:882,25,0	0/1:9,4:13:13.74:147,0,14	0/1:15,8:23:89.07:434,0,89	0/1:15,2:17:99:147,0,236	1/1:24,26:49:51.43:1366,51,0	1/1:8,10:18:23.41:387,23,0	0/1:11,17:28:44.97:654,0,45	1/1:11,20:31:56.82:992,57,0	1/1:6,7:13:8.88:162,9,0	1/1:5,12:16:39.11:669,39,0	0/1:11,38:48:27.33:1795,0,27	0/1:12,24:36:72.50:1443,0,72	1/1:1,13:14:42.14:754,42,0
chr10	47278711	.	ACTAT	A	3422.30	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-8.736;DP=694;FS=0.000;HRun=0;HaplotypeScore=257.3140;InbreedingCoeff=0.9739;MQ=63.67;MQ0=0;MQRankSum=-1.159;QD=38.89;ReadPosRankSum=-0.541;VQSLOD=2.9108;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:35:81.28:0,81,2075	1/1:1,9:10:24:427,24,0	0/0:19,0:18:39.13:0,39,878	0/0:8,0:8:21.07:0,21,514	0/0:25,0:25:36.02:0,36,929	0/0:25,0:25:60.21:0,60,1547	0/0:8,0:8:9.03:0,9,232	1/1:13,32:45:93.30:1607,93,0	0/0:27,0:27:49.03:0,49,1225	0/0:43,0:43:64.62:0,65,2493	0/0:19,0:19:33.08:0,33,851	0/0:33,0:32:64.99:0,65,1584	0/0:22,0:22:42.14:0,42,1038	0/0:19,0:18:36.12:0,36,895	1/1:2,31:33:78.27:1389,78,0	0/0:24,0:24:57.18:0,57,1450	0/0:13,0:13:27.09:0,27,693	0/0:27,0:27:51.04:0,51,1250	0/0:14,0:14:36.12:0,36,877	0/0:40,0:40:78.25:0,78,1977	0/0:18,0:18:31.36:0,31,949	0/0:28,0:28:75.26:0,75,1891	0/0:30,0:30:57.20:0,57,1439	0/0:14,0:14:18.06:0,18,464	0/0:25,0:25:48.16:0,48,1169	0/0:35,0:35:99:0,99,2455	0/0:37,0:37:68.45:0,68,1691	0/0:17,0:17:51.18:0,51,1315
chr10	47278767	.	A	AATCT	28689.30	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=7.884;DP=661;FS=9.059;HRun=0;HaplotypeScore=135.0612;InbreedingCoeff=0.9989;MQ=65.13;MQ0=0;MQRankSum=-6.836;QD=56.92;ReadPosRankSum=6.376;VQSLOD=5.8981;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:54.10:0,54,900	0/0:10,0:10:24.07:0,24,407	0/0:31,0:30:65.86:0,66,1019	0/0:17,0:17:44.36:0,44,703	1/1:3,23:26:66.14:1491,66,0	1/1:6,15:21:57.19:1322,57,0	1/1:2,8:10:30.05:603,30,0	0/0:47,0:47:99:0,111,1920	1/1:2,19:21:42.14:1056,42,0	1/1:5,28:33:93.24:2187,93,0	1/1:0,24:25:60.20:1386,60,0	1/1:4,25:28:60.21:1543,60,0	1/1:3,19:23:48.16:1250,48,0	1/1:4,21:25:54.19:1378,54,0	0/0:30,0:30:81.11:0,81,1274	1/1:2,13:15:42.13:1037,42,0	1/1:4,10:14:33.10:809,33,0	1/1:2,20:23:39.13:1020,39,0	1/1:1,9:9:27.09:670,27,0	1/1:2,31:35:90.31:2211,90,0	1/1:8,8:16:33.09:769,33,0	1/1:3,26:29:81.28:1963,81,0	1/1:4,17:21:51.17:1281,51,0	1/1:1,16:18:27.09:707,27,0	1/1:4,22:26:51.17:1245,51,0	1/1:10,24:33:93.26:2132,93,0	1/1:1,29:30:51.17:1294,51,0	1/1:1,19:20:51.18:1336,51,0
chr10	47278809	.	ATCTGTCTG	A	775.44	PASS	AB=0.706;AC=3;AF=0.054;AN=56;BaseQRankSum=2.838;DP=731;FS=27.565;HRun=0;HaplotypeScore=285.8153;InbreedingCoeff=0.6474;MQ=59.03;MQ0=0;MQRankSum=-3.793;QD=29.82;ReadPosRankSum=-0.799;VQSLOD=2.0050;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:74.83:0,75,2758	0/0:10,0:10:27.09:0,27,1153	0/0:28,0:26:48.10:0,48,1674	0/0:24,0:24:35.30:0,35,1346	0/0:34,0:34:84.25:0,84,3237	1/1:7,7:14:30.07:653,30,0	0/1:7,5:12:27.33:228,0,27	0/0:53,0:53:99:0,117,4255	0/0:33,0:33:75.26:0,75,3124	0/0:36,0:36:99:0,102,3984	0/0:31,0:31:75.26:0,75,3167	0/0:32,0:32:75.26:0,75,3129	0/0:24,0:24:57.11:0,57,2144	0/0:22,0:22:54.19:0,54,2242	0/0:38,0:36:99:0,102,4198	0/0:16,0:16:33.09:0,33,1278	0/0:19,0:19:37.64:0,38,1387	0/0:19,0:19:42.14:0,42,1739	0/0:18,0:18:42.14:0,42,1709	0/0:40,0:40:93.32:0,93,3848	0/0:26,0:26:51.18:0,51,2146	0/0:26,0:26:66.20:0,66,2564	0/0:20,0:20:42.14:0,42,1791	0/0:16,0:16:36.09:0,36,1472	0/0:29,0:29:84.29:0,84,3575	0/0:34,0:34:81.27:0,81,3205	0/0:26,0:26:54.19:0,54,2145	0/0:20,0:20:51.17:0,51,1912
chr10	47278864	.	TCA	T	683.82	PASS	AB=0.913;AC=14;AF=0.250;AN=56;BaseQRankSum=5.914;DP=739;FS=0.553;HRun=0;HaplotypeScore=215.4650;InbreedingCoeff=-0.3145;MQ=56.18;MQ0=4;MQRankSum=-6.398;QD=1.82;ReadPosRankSum=-6.789;VQSLOD=0.5526;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:74.73:0,75,1192	0/0:11,0:11:26.72:0,27,310	0/0:25,0:15:45.07:0,45,732	0/0:17,0:15:41.34:0,41,747	0/1:23,0:23:31.68:32,0,832	0/1:19,0:19:4.08:4,0,389	0/1:14,2:16:9.35:9,0,266	0/1:43,7:50:99:152,0,2187	0/1:31,5:36:99:115,0,871	0/0:37,1:37:89.84:0,90,1908	0/0:27,0:27:14.45:0,14,1029	0/1:25,0:25:35.84:36,0,596	0/1:25,3:28:72.99:73,0,626	0/1:21,1:22:66.11:66,0,709	0/0:49,0:47:99:0,129,1663	0/0:26,0:26:39.12:0,39,522	0/1:15,9:22:15.10:15,0,390	0/1:13,4:17:99:140,0,424	0/0:18,0:16:45.12:0,45,746	0/0:42,0:42:48.57:0,49,1219	0/0:29,0:29:60.13:0,60,915	0/1:23,4:27:16.14:16,0,759	0/1:17,0:17:16.88:17,0,423	0/0:11,3:14:17.61:0,18,319	0/0:22,2:23:11.37:0,11,983	0/1:35,6:40:99:156,0,1450	0/1:30,0:29:4.41:4,0,993	0/0:14,1:15:30.08:0,30,504
chr10	47278866	.	A	ACTAT	9592.65	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-4.316;DP=757;FS=0.699;HRun=0;HaplotypeScore=217.0999;InbreedingCoeff=0.6114;MQ=55.00;MQ0=6;MQRankSum=-0.907;QD=14.71;ReadPosRankSum=-0.738;VQSLOD=4.0768;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:16,11:30:29.59:706,30,0	0/0:5,0:11:15:0,15,135	0/0:25,0:14:2.96:0,3,19	0/0:19,0:15:1.55:0,2,4	1/1:16,2:29:11.66:177,12,0	1/1:13,6:19:36.12:817,36,0	1/1:17,0:17:17.42:211,17,0	1/1:50,0:50:37.65:399,38,0	1/1:34,0:36:17.13:248,17,0	1/1:37,0:38:18.06:286,18,0	1/1:25,0:25:2.92:38,3,0	1/1:18,0:30:12.04:177,12,0	1/1:23,0:29:29.13:420,29,0	1/1:17,5:22:45.15:969,45,0	0/0:22,0:48:69.06:0,69,637	1/1:7,20:27:27.09:636,27,0	1/1:22,0:22:5.70:94,6,0	1/1:19,0:20:10.44:77,10,0	1/1:11,4:13:12.02:234,12,0	1/1:27,14:41:15.99:1278,16,0	1/1:16,15:33:21.07:495,21,0	1/1:26,0:27:24.02:281,24,0	1/1:16,0:17:6.02:85,6,0	1/1:13,1:15:2.57:70,3,0	1/1:24,0:24:0.14:44,0,0	1/1:37,0:39:44.02:642,44,0	1/1:22,6:29:54.18:1159,54,0	1/1:12,0:12:3.01:49,3,0
chr10	47278908	.	A	AT	372.77	PASS	AB=0.902;AC=11;AF=0.196;AN=56;BaseQRankSum=7.098;DP=658;FS=26.313;HRun=0;HaplotypeScore=197.2439;InbreedingCoeff=-0.2037;MQ=61.31;MQ0=5;MQRankSum=-3.938;QD=1.78;ReadPosRankSum=-3.397;VQSLOD=0.4650;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:75.20:0,75,966	0/0:11,0:11:30.10:0,30,395	0/0:27,0:17:43.95:0,44,580	0/0:18,0:15:42.12:0,42,555	0/1:29,0:29:19.15:19,0,165	0/0:32,0:32:74.57:0,75,871	0/1:16,3:19:80.40:80,0,231	0/0:46,0:46:99:0,129,1736	0/0:25,0:26:16.42:0,16,600	0/1:25,1:25:30.99:31,0,610	0/1:10,1:12:10.86:29,0,11	0/0:27,0:27:8.93:0,9,477	0/1:19,2:21:64.03:64,0,184	0/0:30,0:30:53.71:0,54,750	0/0:39,0:39:99:0,99,1319	0/0:22,0:22:42.11:0,42,478	0/1:22,1:22:1.21:1,0,423	0/0:12,0:13:31.05:0,31,448	0/0:14,0:14:35.34:0,35,445	0/0:38,0:38:78.45:0,78,860	0/0:32,0:32:63.08:0,63,743	0/1:10,5:15:90.07:134,0,90	0/1:13,0:13:9.54:10,0,136	0/0:10,2:12:9.39:0,9,109	0/1:12,0:12:5.89:6,0,176	0/1:21,2:27:99:133,0,507	0/0:31,1:31:18.76:0,19,755	0/1:9,0:10:1.56:2,0,243
chr10	47279205	.	TC	T	5586.64	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=0.652;DP=466;FS=10.936;HRun=1;HaplotypeScore=92.0528;InbreedingCoeff=0.8944;MQ=55.95;MQ0=7;MQRankSum=-2.165;QD=13.86;ReadPosRankSum=0.294;VQSLOD=3.0085;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:40.41:0,40,226	1/1:8,0:8:8.27:48,8,0	0/0:25,0:7:12.64:0,13,99	0/0:16,0:11:9.28:0,9,78	1/1:32,0:31:66.87:496,67,0	1/1:18,0:14:26.81:130,27,0	1/1:13,0:10:24.88:171,25,0	1/1:20,0:19:31.83:210,32,0	1/1:11,0:10:25.99:175,26,0	1/1:13,1:14:39.50:316,39,0	1/1:20,1:21:57.04:447,57,0	1/1:15,0:13:24.10:181,24,0	1/1:12,0:11:25.60:170,26,0	1/1:17,0:14:22.61:173,23,0	1/1:21,0:21:47.16:306,47,0	1/1:14,0:14:24.23:147,24,0	1/1:16,2:18:44.16:319,44,0	1/1:15,0:14:29.63:195,30,0	1/1:22,0:20:50.55:324,51,0	1/1:29,0:26:52.34:318,52,0	1/1:7,0:6:10.77:43,11,0	1/1:9,0:9:21.88:128,22,0	1/1:15,0:15:33.67:181,34,0	1/1:6,0:5:7:57,7,0	1/1:15,2:17:33.40:307,33,0	1/1:18,2:20:43.29:328,43,0	1/1:22,0:21:42.46:294,42,0	1/1:6,1:7:15.91:120,16,0
chr10	47280446	.	A	AG	4076.82	PASS	AB=0.950;AC=39;AF=0.696;AN=56;BaseQRankSum=10.002;DP=475;FS=6.547;HRun=2;HaplotypeScore=70.9611;InbreedingCoeff=0.5495;MQ=82.07;MQ0=0;MQRankSum=-7.298;QD=10.53;ReadPosRankSum=6.212;VQSLOD=1.5590;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:50.17:0,50,569	0/0:7,0:7:21.05:0,21,247	0/0:18,0:18:47.70:0,48,524	0/0:12,0:12:25.30:0,25,295	0/1:20,2:22:7.87:189,0,8	0/1:12,3:15:10.24:195,0,10	1/1:9,0:9:19.30:85,19,0	0/0:20,0:20:57.13:0,57,674	1/1:21,0:21:58.33:264,58,0	1/1:18,1:19:14.46:172,14,0	1/1:15,1:16:10.95:160,11,0	0/1:18,0:18:10.96:140,0,11	1/1:23,0:23:61.23:291,61,0	0/1:11,0:11:16.79:77,0,17	0/0:14,0:14:42.09:0,42,481	1/1:18,0:18:46.71:204,47,0	1/1:32,0:32:58.15:352,58,0	1/1:20,0:20:29.96:202,30,0	0/1:19,0:19:36.96:131,0,37	1/1:13,2:15:18.26:186,18,0	1/1:6,0:6:11.07:49,11,0	1/1:5,5:10:21.82:204,22,0	1/1:16,0:16:36.02:180,36,0	1/1:19,0:19:1.24:166,1,0	1/1:16,1:17:11.62:158,12,0	1/1:26,0:26:39.35:238,39,0	1/1:23,0:23:58.01:265,58,0	1/1:12,0:12:31.45:170,31,0
chr10	47280448	.	G	GT	12577.28	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-9.585;DP=492;FS=4.316;HRun=6;HaplotypeScore=47.3323;InbreedingCoeff=0.9778;MQ=82.25;MQ0=0;MQRankSum=-2.561;QD=31.36;ReadPosRankSum=3.087;VQSLOD=5.3728;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:51.09:0,51,509	0/0:7,0:7:18.04:0,18,184	0/0:17,0:17:37.43:0,37,380	0/0:13,0:14:8.63:0,9,180	1/1:3,18:21:48.15:602,48,0	1/1:5,10:15:39.12:488,39,0	1/1:0,9:9:21.07:264,21,0	0/0:21,0:21:54:0,54,526	1/1:1,21:22:63.20:793,63,0	1/1:2,17:20:57.11:661,57,0	1/1:4,13:17:36.12:452,36,0	1/1:4,15:19:39.12:489,39,0	1/1:0,24:24:66.21:830,66,0	1/1:2,11:13:27.09:340,27,0	0/0:14,0:14:36.08:0,36,367	1/1:1,18:19:51.16:642,51,0	1/1:2,32:34:90.23:1113,90,0	1/1:1,19:20:54.17:679,54,0	1/1:4,15:20:51.09:576,51,0	1/1:3,13:17:39.04:445,39,0	1/1:0,6:6:12.04:151,12,0	1/1:5,5:11:27.04:311,27,0	1/1:2,14:17:40.01:489,40,0	1/1:2,17:19:51.16:642,51,0	1/1:2,12:17:39.12:490,39,0	1/1:1,24:26:75.20:914,75,0	1/1:1,22:23:63.20:792,63,0	1/1:1,11:12:33.11:415,33,0
chr10	47280821	.	TAC	T	11252.92	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=13.133;DP=722;FS=0.700;HRun=0;HaplotypeScore=252.7810;InbreedingCoeff=0.9591;MQ=48.03;MQ0=5;MQRankSum=-7.425;QD=25.06;ReadPosRankSum=2.543;VQSLOD=5.2368;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:89.61:0,90,1596	0/0:8,0:8:24.08:0,24,420	0/0:39,0:18:48.16:0,48,788	0/0:45,0:22:45.09:0,45,668	1/1:2,27:29:18.42:249,18,0	0/0:23,0:23:54.19:0,54,958	0/0:28,0:28:63.22:0,63,1104	0/0:45,0:45:99:0,132,2277	1/1:0,28:28:48.63:659,49,0	1/1:1,26:27:75.25:1024,75,0	1/1:1,13:14:12.51:166,13,0	1/1:2,17:19:26.73:354,27,0	1/1:1,14:15:33.58:441,34,0	1/1:0,35:35:87.76:1197,88,0	0/0:45,0:45:99:0,123,2117	1/1:1,33:34:49.10:659,49,0	1/1:1,17:18:23.22:402,23,0	1/1:4,16:20:45.14:605,45,0	1/1:2,19:21:50.77:680,51,0	1/1:0,28:28:66.69:908,67,0	1/1:1,32:33:84.27:1154,84,0	1/1:2,18:20:15.05:206,15,0	1/1:1,17:18:17.76:247,18,0	1/1:2,9:11:3.01:42,3,0	1/1:3,23:26:28.50:373,29,0	1/1:0,21:21:63.21:857,63,0	1/1:0,24:24:57.19:783,57,0	1/1:0,8:8:18.06:247,18,0
chr10	47280837	.	C	CAT	2132.82	PASS	AB=0.970;AC=22;AF=0.393;AN=56;BaseQRankSum=5.433;DP=761;FS=33.373;HRun=0;HaplotypeScore=329.7824;InbreedingCoeff=0.3119;MQ=45.65;MQ0=5;MQRankSum=-5.842;QD=5.73;ReadPosRankSum=-0.185;VQSLOD=1.4443;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:86.83:0,87,1144	0/0:10,0:10:29.98:0,30,406	0/0:42,0:19:50.72:0,51,655	0/0:41,0:18:35.51:0,36,449	0/0:30,0:30:17.82:0,18,108	0/1:24,0:24:28.40:28,0,116	0/1:28,0:28:44.02:44,0,115	0/0:43,0:42:87.96:0,88,1445	1/1:9,19:28:5.58:364,6,0	0/0:33,0:33:35.65:0,36,402	0/0:18,0:18:8.82:0,9,72	1/1:9,15:24:23.05:356,23,0	1/1:6,14:20:14.05:412,14,0	0/0:33,0:33:11.11:0,11,243	0/0:39,0:39:99:0,117,1665	1/1:12,19:31:38.55:567,39,0	0/1:21,0:21:7.27:7,0,125	0/1:22,0:22:25.76:26,0,141	0/1:24,0:24:2.01:2,0,207	0/0:31,0:31:14.77:0,15,230	0/1:30,0:30:2.39:2,0,223	1/1:9,9:18:18.02:241,18,0	1/1:11,12:23:0.26:234,0,0	0/1:8,5:14:0.03:0,0,0	0/1:28,0:28:3.32:3,0,103	0/0:28,0:28:30.70:0,31,286	0/1:25,0:24:15.70:16,0,156	0/1:12,0:12:5.14:5,0,65
chr10	47281556	.	CTCT	C	1425.31	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.225;DP=633;FS=4.254;HRun=0;HaplotypeScore=124.4870;InbreedingCoeff=0.9996;MQ=58.48;MQ0=3;MQRankSum=-0.828;QD=36.55;ReadPosRankSum=1.613;VQSLOD=4.7305;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,120,2515	0/0:13,0:13:39.13:0,39,844	0/0:30,0:19:48.98:0,49,1010	0/0:28,0:20:47.14:0,47,836	0/0:20,0:20:57.18:0,57,1133	1/1:0,24:24:63.21:985,63,0	1/1:0,15:15:36.12:562,36,0	0/0:26,0:25:59.19:0,59,1175	0/0:24,0:24:54.18:0,54,1155	0/0:16,0:16:33.88:0,34,735	0/0:15,0:15:42.14:0,42,910	0/0:24,0:24:60.21:0,60,1284	0/0:21,0:21:45.15:0,45,923	0/0:21,0:21:57.20:0,57,1223	0/0:25,0:25:66.23:0,66,1421	0/0:28,0:28:72.18:0,72,1421	0/0:22,0:22:60.18:0,60,1255	0/0:23,0:23:63.22:0,63,1355	0/0:17,0:17:42.14:0,42,861	0/0:21,0:21:57.20:0,57,1224	0/0:32,0:32:66.23:0,66,1390	0/0:23,0:23:60.21:0,60,1296	0/0:29,0:29:69.24:0,69,1491	0/0:18,0:18:42.12:0,42,851	0/0:17,0:17:48.16:0,48,1039	0/0:20,0:20:48.15:0,48,984	0/0:25,0:25:72.16:0,72,1457	0/0:14,0:14:36.09:0,36,697
chr10	47281610	.	TGCGCATGCACGCAC	T	6284.16	PASS	AB=0.667;AC=21;AF=0.389;AN=54;BaseQRankSum=10.063;DP=495;FS=8.613;HRun=0;HaplotypeScore=211.2671;InbreedingCoeff=0.9007;MQ=55.53;MQ0=2;MQRankSum=-10.670;QD=31.26;ReadPosRankSum=3.817;VQSLOD=2.8198;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:96.31:0,96,5430	0/0:7,0:7:21.03:0,21,954	0/0:13,0:7:4.33:0,4,111	0/0:20,0:11:23.14:0,23,773	0/0:10,0:10:18.05:0,18,917	0/0:18,0:18:10.56:0,11,789	0/0:30,0:30:46.15:0,46,2905	0/0:16,0:16:42.14:0,42,2359	1/1:10,11:20:18.06:641,18,0	0/0:15,0:15:45.15:0,45,2911	0/0:16,0:16:33.57:0,34,1628	1/1:12,9:21:33.22:1108,33,0	1/1:5,7:12:12.04:443,12,0	1/1:12,7:19:23.88:464,24,0	0/0:21,0:21:39.61:0,40,2423	1/1:11,12:23:27.56:905,28,0	0/0:25,0:25:59.79:0,60,2880	0/0:17,0:17:39.34:0,39,2149	1/1:4,9:13:29.01:602,29,0	./.	0/1:7,7:13:0:0,0,0	1/1:6,7:13:5.64:174,6,0	1/1:6,12:18:12.04:433,12,0	1/1:11,10:21:6.92:173,7,0	0/0:11,0:11:33.11:0,33,1591	0/0:16,0:16:48.16:0,48,2884	1/1:22,4:26:57.15:1341,57,0	0/0:6,0:6:15.52:0,16,699
chr10	47281611	.	GCGCA	G	2573.03	PASS	AC=20;AF=0.385;AN=52;BaseQRankSum=11.565;DP=464;FS=11.155;HRun=0;HaplotypeScore=153.8489;InbreedingCoeff=0.9266;MQ=55.25;MQ0=2;MQRankSum=-10.242;QD=15.79;ReadPosRankSum=5.417;VQSLOD=2.7027;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:93.75:0,94,2263	0/0:7,0:7:21.03:0,21,463	0/0:15,0:6:4:0,4,56	0/0:19,0:10:21.62:0,22,311	0/0:11,0:11:17.99:0,18,391	0/0:19,0:19:22.83:0,23,364	0/0:31,0:31:48.54:0,49,1239	0/0:15,0:15:42.14:0,42,1015	1/1:11,6:17:18.06:242,18,0	0/0:15,0:15:45.14:0,45,1232	0/0:16,0:16:33.03:0,33,703	1/1:9,9:18:32.83:455,33,0	1/1:7,3:10:12.04:171,12,0	1/1:18,1:19:24.06:279,24,0	0/0:21,0:21:39.13:0,39,1051	1/1:12,8:20:27.09:387,27,0	0/0:25,0:25:60.10:0,60,1276	0/0:17,0:17:39.33:0,39,909	1/1:10,1:11:24.31:248,24,0	./.	./.	1/1:7,4:11:5.61:87,6,0	1/1:13,3:16:12.03:149,12,0	1/1:10,7:17:6.25:87,6,0	0/0:11,0:11:30.07:0,30,662	0/0:17,0:17:51.12:0,51,1254	1/1:19,4:23:57.11:672,57,0	0/0:6,0:6:15.47:0,15,303
chr10	47281613	.	GCA	G	1282.52	PASS	AC=20;AF=0.385;AN=52;BaseQRankSum=11.516;DP=465;FS=12.903;HRun=0;HaplotypeScore=147.2441;InbreedingCoeff=0.9209;MQ=54.95;MQ0=2;MQRankSum=-10.563;QD=7.87;ReadPosRankSum=5.888;VQSLOD=2.1852;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:96.29:0,96,1853	0/0:6,0:6:15.05:0,15,304	0/0:15,0:6:3.93:0,4,63	0/0:19,0:10:24.08:0,24,426	0/0:10,0:10:15.05:0,15,302	0/0:18,0:18:20.09:0,20,334	0/0:31,0:31:48.11:0,48,943	0/0:16,0:16:45.14:0,45,860	1/1:18,0:17:17.53:110,18,0	0/0:16,0:16:48.13:0,48,918	0/0:15,0:15:30.08:0,30,513	1/1:18,0:18:32.20:206,32,0	1/1:10,0:10:11.79:80,12,0	1/1:15,4:19:23.70:172,24,0	0/0:21,0:21:39.13:0,39,791	1/1:20,0:20:26.38:165,26,0	0/0:26,0:26:56.93:0,57,1098	0/0:17,0:17:39.29:0,39,763	1/1:11,0:11:25.87:157,26,0	./.	./.	1/1:11,0:11:5.40:32,5,0	1/1:16,0:16:11.49:61,11,0	1/1:17,0:17:6.06:33,6,0	0/0:12,0:12:29.82:0,30,523	0/0:17,0:17:51.13:0,51,972	1/1:18,5:23:56.68:471,57,0	0/0:6,0:6:15.52:0,16,282
chr10	47281616	.	TGCACGCAC	T	4614.16	PASS	AB=1.000;AC=22;AF=0.423;AN=52;BaseQRankSum=11.118;DP=453;FS=16.614;HRun=0;HaplotypeScore=163.6706;InbreedingCoeff=0.7743;MQ=54.19;MQ0=3;MQRankSum=-10.954;QD=23.66;ReadPosRankSum=5.809;VQSLOD=2.5170;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:92.98:0,93,3416	0/0:6,0:6:15.05:0,15,594	0/0:13,0:5:5.92:0,6,27	0/1:17,0:9:22.78:23,0,236	0/0:11,0:11:15.05:0,15,578	0/1:17,0:17:12.50:12,0,373	0/0:31,0:31:47.48:0,47,1821	0/0:16,0:16:39.13:0,39,1574	1/1:12,6:17:18.06:417,18,0	0/0:15,0:15:45.15:0,45,1892	0/0:13,0:13:24.55:0,25,978	1/1:9,9:18:33.20:770,33,0	1/1:7,3:10:12.04:287,12,0	1/1:18,1:19:24.08:494,24,0	0/0:21,0:21:39.59:0,40,1493	1/1:12,8:20:27.56:635,28,0	0/0:24,0:24:50.87:0,51,1738	0/0:16,0:16:34.09:0,34,1309	1/1:10,1:11:18.42:345,18,0	./.	./.	1/1:7,4:11:6.07:137,6,0	1/1:13,3:16:12.04:254,12,0	1/1:11,6:17:6.23:137,6,0	0/0:10,0:10:27.06:0,27,921	0/0:17,0:17:45.15:0,45,1868	1/1:20,0:20:48.16:1103,48,0	0/0:5,0:5:9.50:0,10,352
chr10	47281617	.	GCACGCA	G	3628.53	PASS	AB=1.000;AC=21;AF=0.404;AN=52;BaseQRankSum=11.319;DP=448;FS=15.359;HRun=0;HaplotypeScore=155.0959;InbreedingCoeff=0.8628;MQ=52.76;MQ0=3;MQRankSum=-10.654;QD=20.50;ReadPosRankSum=6.116;VQSLOD=1.8031;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:93.27:0,93,2776	0/0:6,0:6:15.05:0,15,480	0/0:13,0:5:4.71:0,5,28	0/0:16,0:8:14.72:0,15,163	0/0:12,0:12:15.04:0,15,463	0/1:17,0:17:3.83:4,0,276	0/0:31,0:31:48.47:0,48,1489	0/0:15,0:15:39.13:0,39,1327	1/1:18,0:17:18.06:290,18,0	0/0:15,0:15:45.15:0,45,1566	0/0:13,0:13:24.55:0,25,794	1/1:18,0:18:33.44:532,33,0	1/1:10,0:10:12.04:199,12,0	1/1:8,11:19:24.08:515,24,0	0/0:21,0:21:36.59:0,37,1202	1/1:20,0:20:27.09:432,27,0	0/0:24,0:24:51.09:0,51,1391	0/0:15,0:15:35.84:0,36,1092	1/1:10,1:11:20.78:292,21,0	./.	./.	1/1:11,0:11:5.59:88,6,0	1/1:16,0:16:12.04:173,12,0	1/1:16,1:17:6.48:89,6,0	0/0:10,0:10:27.09:0,27,772	0/0:17,0:17:48.16:0,48,1625	1/1:4,15:20:48.16:1013,48,0	0/0:5,0:5:9.50:0,10,286
chr10	47281624	.	C	CGTGT	2867.48	PASS	AB=1.000;AC=33;AF=0.635;AN=52;BaseQRankSum=-6.132;DP=587;FS=0.000;HRun=0;HaplotypeScore=221.8702;InbreedingCoeff=0.4965;MQ=43.28;MQ0=4;MQRankSum=1.193;QD=6.26;ReadPosRankSum=-4.357;VQSLOD=1.7756;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:51:23.88:109,24,0	./.	0/0:10,0:2:0.47:0,0,1	./.	0/1:18,0:18:0:0,0,0	1/1:23,0:24:15.05:238,15,0	1/1:42,0:42:18.49:250,18,0	1/1:25,0:25:20.83:284,21,0	0/0:22,0:21:9.69:0,10,47	0/1:22,0:22:0.88:325,0,1	1/1:20,0:20:3:25,3,0	0/1:24,0:24:31.34:47,0,31	0/0:12,0:12:4.59:0,5,15	1/1:22,0:21:8.29:50,8,0	1/1:29,0:25:12.04:226,12,0	0/1:23,0:22:7.81:8,0,25	1/1:21,0:25:17.82:254,18,0	1/1:21,0:21:13.22:286,13,0	1/1:16,0:15:13.84:125,14,0	0/0:15,0:14:2.37:0,2,8	0/1:16,0:13:0:0,0,0	0/0:11,0:11:4.78:0,5,17	0/0:19,0:19:10.84:0,11,62	0/0:20,0:20:5.14:0,5,18	1/1:18,1:22:2.87:21,3,0	1/1:26,0:28:33.99:511,34,0	1/1:25,0:25:33.48:170,33,0	1/1:4,0:4:6.91:90,7,0
chr10	47282074	.	CA	C	1795.62	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-2.210;DP=478;FS=1.934;HRun=1;HaplotypeScore=72.8997;InbreedingCoeff=0.8527;MQ=78.34;MQ0=0;MQRankSum=-2.511;QD=36.65;ReadPosRankSum=-3.924;VQSLOD=2.5016;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:63.20:0,63,984	1/1:0,3:3:3.01:42,3,0	0/0:14,0:15:39.12:0,39,574	0/0:8,0:8:0.81:0,1,136	0/0:24,0:24:72.23:0,72,1128	0/0:30,0:30:90.29:0,90,1416	0/0:21,0:21:63.20:0,63,983	1/1:1,34:35:99:1424,105,0	0/0:9,0:9:27.09:0,27,429	0/0:26,0:26:75.20:0,75,1198	0/0:18,0:18:51.16:0,51,793	0/0:13,0:13:39.13:0,39,624	0/0:22,0:22:66.23:0,66,1052	0/0:16,0:16:48.16:0,48,765	1/1:0,11:11:33.11:462,33,0	0/0:14,0:14:42.14:0,42,671	0/0:24,0:24:72.25:0,72,1148	0/0:18,0:18:54.18:0,54,863	0/0:23,0:23:66.19:0,66,1029	0/0:15,0:15:33.11:0,33,528	0/0:8,0:8:24.08:0,24,384	0/0:7,0:7:21.07:0,21,336	0/0:10,0:10:30.10:0,30,479	0/0:10,0:10:30.06:0,30,452	0/0:18,0:18:51.17:0,51,815	0/0:32,0:32:96.33:0,96,1536	0/0:16,0:16:45.13:0,45,677	0/0:10,0:10:30.10:0,30,480
chr10	47282951	.	C	CA	22155.92	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-9.332;DP=749;FS=0.309;HRun=1;HaplotypeScore=80.5695;InbreedingCoeff=0.9993;MQ=88.57;MQ0=0;MQRankSum=-4.701;QD=40.50;ReadPosRankSum=5.159;VQSLOD=5.1183;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:90.29:0,90,1168	0/0:16,0:16:48.14:0,48,609	0/0:28,0:28:72.23:0,72,933	0/0:31,0:31:69.20:0,69,860	1/1:1,20:21:63.17:912,63,0	0/0:28,0:28:78.25:0,78,1007	0/0:18,0:18:45.11:0,45,554	0/0:22,0:22:66.21:0,66,842	1/1:0,27:27:78.26:1169,78,0	1/1:2,33:35:99:1422,99,0	1/1:0,20:20:57.19:854,57,0	1/1:2,28:30:78.26:1169,78,0	1/1:5,34:39:93.27:1369,93,0	1/1:2,35:37:99:1483,99,0	0/0:29,0:29:87.28:0,87,1130	1/1:0,34:34:96.33:1439,96,0	1/1:1,36:37:87.29:1304,87,0	1/1:1,29:31:87.25:1278,87,0	1/1:1,20:21:63.21:925,63,0	1/1:0,20:20:60.20:899,60,0	1/1:1,26:27:78.26:1168,78,0	1/1:1,24:25:57.15:829,57,0	1/1:1,17:18:51.17:764,51,0	1/1:0,37:37:99:1529,102,0	1/1:0,26:26:69.23:1034,69,0	1/1:1,32:33:96.33:1438,96,0	1/1:0,22:22:57.19:854,57,0	1/1:0,7:7:21.07:315,21,0
chr10	47283037	.	T	TAGGC	8115.32	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-12.253;DP=735;FS=10.986;HRun=0;HaplotypeScore=118.5334;InbreedingCoeff=0.9848;MQ=62.07;MQ0=3;MQRankSum=0.032;QD=31.95;ReadPosRankSum=-2.217;VQSLOD=4.0522;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:87.19:0,87,1370	1/1:4,7:11:18.06:438,18,0	0/0:33,0:27:45.10:0,45,653	0/0:34,0:31:54.17:0,54,846	0/0:28,0:28:60.20:0,60,990	1/1:8,14:23:26.30:595,26,0	1/1:14,22:37:54.19:1323,54,0	1/1:16,3:22:17.99:245,18,0	0/0:30,0:30:57.19:0,57,940	0/0:27,0:27:48.16:0,48,765	0/0:4,0:4:9.03:0,9,148	0/0:31,0:31:75.26:0,75,1235	0/0:27,0:27:57.17:0,57,889	1/1:26,15:40:69.21:1425,69,0	1/1:6,23:28:48.16:1176,48,0	0/0:28,0:28:66.18:0,66,1057	0/0:35,0:34:81.28:0,81,1334	0/0:33,0:33:77.19:0,77,1200	1/1:9,4:15:18.03:344,18,0	1/1:13,5:18:24.54:532,25,0	1/1:25,13:38:56.71:1155,57,0	0/0:21,0:21:33.10:0,33,521	0/0:14,0:15:33.08:0,33,474	0/0:31,0:31:39.22:0,39,956	0/0:21,0:21:45.13:0,45,687	0/0:29,0:29:48.14:0,48,734	1/1:9,11:20:36.12:882,36,0	0/0:8,0:8:15.03:0,15,221
chr10	47283327	.	A	AT	6099.72	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-16.443;DP=603;FS=5.242;HRun=7;HaplotypeScore=78.2429;InbreedingCoeff=0.9934;MQ=77.12;MQ0=0;MQRankSum=0.564;QD=30.35;ReadPosRankSum=-2.085;VQSLOD=4.3834;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,132,1260	1/1:1,8:9:24.07:290,24,0	0/0:15,0:15:33.01:0,33,307	0/0:9,0:9:11.74:0,12,96	0/0:25,0:25:72.11:0,72,695	1/1:3,22:25:60.18:725,60,0	1/1:1,16:17:19.17:515,19,0	1/1:4,25:29:75.23:906,75,0	0/0:24,0:24:63.10:0,63,608	0/0:27,0:27:78.12:0,78,750	0/0:18,0:18:45.07:0,45,434	0/0:27,0:27:75.11:0,75,719	0/0:17,0:17:48.06:0,48,458	1/1:2,14:16:33.10:398,33,0	1/1:3,16:19:48.15:580,48,0	0/0:19,0:19:54.07:0,54,515	0/0:17,0:17:51.08:0,51,492	0/0:29,0:29:63.09:0,63,608	1/1:2,8:10:24.07:290,24,0	1/1:0,20:20:57.17:689,57,0	1/1:2,29:31:81.25:978,81,0	0/0:13,0:13:33.05:0,33,319	0/0:23,0:23:66.10:0,66,636	0/0:24,0:24:66.10:0,66,637	0/0:21,0:21:54.07:0,54,521	0/0:29,0:29:52.48:0,52,689	1/1:5,20:25:37.22:729,37,0	0/0:14,0:14:30.05:0,30,290
chr10	47283903	.	AT	A	4108.03	PASS	AB=0.929;AC=17;AF=0.304;AN=56;BaseQRankSum=13.124;DP=688;FS=1.924;HRun=9;HaplotypeScore=65.4807;InbreedingCoeff=0.9491;MQ=76.68;MQ0=0;MQRankSum=-0.556;QD=22.45;ReadPosRankSum=2.342;VQSLOD=4.6042;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,1:36:74.81:0,75,1095	0/0:20,0:20:57.17:0,57,658	0/0:21,0:21:45.08:0,45,497	0/1:12,1:13:0.55:1,0,211	1/1:2,29:31:84.03:769,84,0	0/0:24,0:25:72.05:0,72,811	0/0:31,0:31:84.21:0,84,942	0/0:31,0:31:84.24:0,84,960	0/0:19,0:19:57.16:0,57,650	1/1:3,23:26:72.02:654,72,0	1/1:0,26:26:69.03:631,69,0	0/0:22,0:22:63.18:0,63,719	0/0:22,0:22:57.06:0,57,639	0/0:33,0:33:96.27:0,96,1097	0/0:28,0:28:75.22:0,75,866	0/0:34,0:34:90.26:0,90,1030	1/1:1,16:17:41.53:384,42,0	1/1:2,11:13:33.02:302,33,0	0/0:17,0:17:45.13:0,45,513	0/0:23,1:24:32.71:0,33,630	0/0:19,0:20:57:0,57,638	0/0:25,0:25:66.20:0,66,762	0/0:30,0:31:87.09:0,87,984	0/0:21,0:21:60.18:0,60,689	1/1:0,26:26:75.04:686,75,0	1/1:6,21:27:63.01:571,63,0	0/0:45,0:44:99:0,123,1420	1/1:0,4:4:12.01:110,12,0
chr10	47285883	.	C	CGT	645.52	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=5.656;DP=490;FS=0.606;HRun=0;HaplotypeScore=135.0499;InbreedingCoeff=0.5893;MQ=54.16;MQ0=0;MQRankSum=-3.670;QD=6.65;ReadPosRankSum=-5.308;VQSLOD=1.4786;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,153,2204	0/1:2,0:2:0:0,0,0	0/0:6,0:6:17.94:0,18,205	0/0:8,0:6:3.01:0,3,46	0/0:18,0:18:15.49:0,15,185	0/0:19,0:19:20.90:0,21,419	0/0:32,0:32:62.53:0,63,1013	0/0:15,0:15:5:0,5,151	0/0:14,0:14:17.91:0,18,212	0/0:25,0:25:63.20:0,63,910	0/0:14,0:14:2.34:0,2,205	0/0:23,0:22:17.72:0,18,297	0/0:15,0:15:23.76:0,24,350	1/1:9,0:9:9.33:136,9,0	0/0:4,0:4:9.02:0,9,112	0/1:11,0:11:0.58:1,0,143	0/0:23,0:23:31.14:0,31,516	0/0:29,0:29:78.88:0,79,1033	1/1:5,12:17:20.85:373,21,0	1/1:3,6:9:6.02:97,6,0	1/1:0,17:17:6.02:105,6,0	0/1:18,0:18:28.83:29,0,83	0/0:20,0:20:4.94:0,5,235	0/0:22,0:23:20.82:0,21,356	0/0:19,0:19:20.68:0,21,513	0/0:19,0:19:47.58:0,48,602	1/1:1,13:14:3.01:56,3,0	0/0:14,0:14:23.81:0,24,398
chr10	47285887	.	TGCGC	T	375	PASS	AB=0.874;AC=8;AF=0.148;AN=54;BaseQRankSum=4.508;DP=434;FS=11.188;HRun=0;HaplotypeScore=130.1670;InbreedingCoeff=0.0924;MQ=51.22;MQ0=0;MQRankSum=-3.161;QD=3.26;ReadPosRankSum=2.141;VQSLOD=2.0650;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:49:99:0,111,2626	0/0:2,0:2:0:0,0,0	0/0:4,0:4:3.01:0,3,41	./.	0/0:18,0:18:5.09:0,5,165	0/0:15,0:15:21.05:0,21,282	0/0:30,0:30:42.42:0,42,583	0/0:9,0:9:16.79:0,17,176	1/1:13,0:13:5.33:15,5,0	0/0:22,0:22:47.69:0,48,1024	0/0:8,0:8:8.73:0,9,91	0/1:20,0:19:19.71:49,0,20	0/1:7,5:12:10.45:144,0,10	0/0:9,0:9:9.03:0,9,146	0/0:3,0:3:3:0,3,25	0/1:12,0:12:8.97:9,0,33	0/0:22,0:22:35.12:0,35,687	0/0:29,0:29:42.24:0,42,1022	0/0:16,0:16:20.89:0,21,252	0/0:4,0:4:6.02:0,6,95	0/0:16,0:16:6.02:0,6,101	0/1:16,2:18:39.85:40,0,92	0/1:11,7:18:29.69:30,0,33	0/1:20,2:22:2.67:214,0,3	0/0:19,0:19:30.03:0,30,563	0/0:18,0:18:45.03:0,45,827	0/0:13,0:13:2.99:0,3,53	0/0:8,0:8:15.03:0,15,279
chr10	47285896	.	G	GCA	1438.53	PASS	AB=1.000;AC=28;AF=0.519;AN=54;BaseQRankSum=10.225;DP=395;FS=17.943;HRun=0;HaplotypeScore=115.2998;InbreedingCoeff=0.2738;MQ=48.29;MQ0=1;MQRankSum=-5.854;QD=5.45;ReadPosRankSum=-2.864;VQSLOD=1.4314;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,135,1782	./.	0/0:6,0:5:6.87:0,7,52	0/0:4,0:3:3:0,3,26	0/1:21,0:21:2.66:3,0,83	0/1:14,0:14:12.09:12,0,213	0/0:24,0:24:45.01:0,45,540	0/1:13,0:13:3.17:3,0,134	1/1:2,8:12:9.02:120,9,0	0/0:19,0:19:29.72:0,30,573	0/1:7,0:7:16.24:16,0,36	1/1:2,13:18:14.61:160,15,0	1/1:6,1:9:15.86:159,16,0	0/0:4,0:4:8.91:0,9,87	0/0:3,0:3:3:0,3,25	1/1:2,4:12:20.54:269,21,0	0/1:22,0:22:35.16:35,0,320	0/1:27,0:27:88.66:89,0,539	0/1:10,0:10:49.52:50,0,84	1/1:3,0:3:4.53:15,5,0	1/1:15,0:14:4.61:18,5,0	1/1:4,7:17:21.70:187,22,0	1/1:9,1:16:20.49:226,20,0	1/1:10,6:20:18.28:183,18,0	0/0:17,0:17:5.67:0,6,235	0/1:20,0:20:60.47:60,0,394	1/1:7,0:7:2.68:11,3,0	0/0:7,0:7:2.81:0,3,165
chr10	47285898	.	G	GCACA	2109.50	PASS	AB=0.986;AC=24;AF=0.462;AN=52;BaseQRankSum=11.468;DP=392;FS=15.528;HRun=0;HaplotypeScore=122.7469;InbreedingCoeff=-0.0133;MQ=47.98;MQ0=1;MQRankSum=-7.143;QD=7.59;ReadPosRankSum=-2.508;VQSLOD=1.3125;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,129,2387	./.	0/0:5,0:5:5.90:0,6,81	0/0:7,0:5:6.02:0,6,79	0/1:21,0:21:34.40:34,0,107	0/1:14,0:14:47.60:48,0,183	0/0:23,0:23:33.84:0,34,352	0/1:13,0:13:23.93:24,0,130	1/1:10,2:12:8.24:133,8,0	0/1:19,0:19:37.57:38,0,522	0/1:7,0:7:35.46:46,0,35	1/1:14,4:17:8.24:179,8,0	1/1:7,2:9:5.17:121,5,0	0/0:4,0:4:8.98:0,9,97	./.	1/1:6,6:12:19.13:306,19,0	0/1:23,0:23:93.04:93,0,313	0/1:25,0:25:99:309,0,520	0/1:12,0:12:39.08:39,0,217	0/0:3,0:3:5.99:0,6,58	0/0:15,0:14:5.89:0,6,69	1/1:11,6:17:17.01:164,17,0	1/1:11,5:16:19.12:241,19,0	0/1:15,4:19:3.25:166,0,3	0/1:15,0:15:62.96:63,0,151	0/1:19,0:19:99:270,0,392	0/0:6,0:6:2.81:0,3,30	0/1:7,0:7:2.92:3,0,184
chr10	47285906	.	G	GCACACACACACA	12133.32	PASS	AB=0.829;AC=44;AF=0.846;AN=52;BaseQRankSum=-0.388;DP=534;FS=4.856;HRun=0;HaplotypeScore=202.8944;InbreedingCoeff=0.5946;MQ=47.76;MQ0=1;MQRankSum=-6.112;QD=27.27;ReadPosRankSum=-2.686;VQSLOD=3.5456;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,126,3987	1/1:7,0:7:2.99:24,3,0	0/1:14,0:11:3.76:4,0,259	0/0:10,0:8:18.03:0,18,280	0/1:11,10:23:0:0,0,0	1/1:23,0:23:11.96:266,12,0	1/1:32,0:32:17.77:515,18,0	1/1:15,0:14:18.48:265,18,0	1/1:16,0:16:17.70:445,18,0	1/1:10,7:26:30.09:1009,30,0	./.	1/1:26,0:25:27.06:638,27,0	1/1:12,0:12:9.03:212,9,0	1/1:9,0:9:3.01:102,3,0	./.	1/1:17,0:17:24.07:757,24,0	1/1:13,8:25:15.05:820,15,0	1/1:12,11:31:33.11:1754,33,0	1/1:23,0:21:45.13:1336,45,0	1/1:11,0:11:5.99:96,6,0	1/1:15,0:13:6.02:90,6,0	1/1:22,0:22:12.01:351,12,0	1/1:19,0:19:18.12:482,18,0	1/1:15,4:27:8.64:299,9,0	1/1:6,6:16:9.03:534,9,0	1/1:8,9:22:33.57:1307,34,0	1/1:14,0:14:33.02:828,33,0	0/0:3,0:14:0.47:0,0,1
chr10	47287039	.	T	TTCCCTCCCTTCCTCCC	27214.36	PASS	AB=1.000;AC=31;AF=0.554;AN=56;BaseQRankSum=-1.301;DP=545;FS=4.951;HRun=0;HaplotypeScore=215.5301;InbreedingCoeff=0.9045;MQ=64.10;MQ0=0;MQRankSum=-13.665;QD=94.82;ReadPosRankSum=-1.210;VQSLOD=4.2047;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:90.31:0,90,3824	0/0:9,0:9:27.08:0,27,1009	0/0:26,0:22:16.60:0,17,755	0/0:15,0:12:21.50:0,22,620	1/1:9,5:15:12.04:913,12,0	0/0:24,0:23:45.11:0,45,1620	0/0:17,0:18:39.23:0,39,1535	0/0:38,0:38:45.13:0,45,1207	1/1:11,8:19:48.16:3075,48,0	1/1:17,3:21:36.12:1988,36,0	1/1:14,4:21:18.06:1105,18,0	1/1:14,9:24:42.14:2656,42,0	1/1:16,4:20:42.14:2902,42,0	0/1:24,0:24:11.41:11,0,2397	0/0:18,0:18:48.14:0,48,1672	1/1:10,9:21:36.12:2616,36,0	1/1:15,5:22:24.08:1577,24,0	1/1:7,2:10:9.03:636,9,0	0/0:15,0:15:36.12:0,36,1413	0/0:17,0:17:45.15:0,45,1729	0/0:16,0:16:39.13:0,39,1572	1/1:3,7:10:30.10:2093,30,0	1/1:13,4:18:33.11:1970,33,0	1/1:10,1:11:9.03:495,9,0	1/1:12,8:20:33.11:2315,33,0	1/1:16,6:22:39.12:2006,39,0	0/0:22,0:22:54.17:0,54,2271	1/1:5,3:9:12.04:856,12,0
chr10	47287363	.	TTGTGTGTGTGTGTG	T	1825.75	PASS	AB=0.637;AC=15;AF=0.268;AN=56;BaseQRankSum=6.015;DP=622;FS=8.325;HRun=0;HaplotypeScore=210.6336;InbreedingCoeff=0.6029;MQ=55.36;MQ0=23;MQRankSum=-6.233;QD=11.34;ReadPosRankSum=-0.042;VQSLOD=1.2132;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:45:63.19:0,63,3175	0/0:7,0:14:13.72:0,14,666	0/0:38,0:12:3.48:0,3,41	0/0:48,0:17:2.50:0,2,9	0/0:18,0:20:18.04:0,18,434	0/1:8,0:19:7.25:7,0,109	0/0:9,0:13:6.02:0,6,91	0/0:21,0:21:24.07:0,24,788	1/1:11,11:21:11.79:177,12,0	0/0:17,0:17:13.27:0,13,208	0/0:15,0:19:24.02:0,24,422	1/1:6,7:13:12.04:391,12,0	1/1:8,7:16:11.41:381,11,0	0/0:9,0:12:21.07:0,21,974	0/0:17,0:19:17.09:0,17,592	1/1:10,10:20:15.01:413,15,0	0/0:21,0:27:25.87:0,26,448	0/1:9,0:19:36.56:37,0,346	0/0:14,0:13:12.03:0,12,321	0/0:18,0:28:34.56:0,35,1918	0/0:47,0:46:84.20:0,84,3873	1/1:6,8:16:17.73:429,18,0	1/1:10,3:13:2.97:20,3,0	0/1:9,14:23:11.96:148,0,12	0/0:11,0:15:12:0,12,232	0/0:21,0:30:45.14:0,45,1047	0/0:9,0:18:18.78:0,19,761	0/0:8,0:9:23.09:0,23,416
chr10	47289418	.	G	GA	6936.95	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-6.048;DP=346;FS=7.616;HRun=0;HaplotypeScore=54.3171;InbreedingCoeff=0.8723;MQ=82.03;MQ0=3;MQRankSum=-4.105;QD=27.42;ReadPosRankSum=5.007;VQSLOD=5.3493;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:43.78:0,44,474	0/0:1,0:1:2.99:0,3,23	0/0:34,0:20:51.08:0,51,478	0/0:30,0:22:38.28:0,38,351	1/1:1,7:8:9.02:120,9,0	1/1:1,13:14:27.09:385,27,0	1/1:1,15:16:30.09:411,30,0	0/0:6,0:6:18:0,18,200	1/1:0,7:7:12.04:168,12,0	1/1:0,5:5:15.04:196,15,0	1/1:0,10:10:30.10:428,30,0	1/1:1,8:9:15.05:211,15,0	1/1:2,5:6:12.04:168,12,0	1/1:4,2:5:12.01:138,12,0	0/0:6,0:6:12.04:0,12,167	1/1:0,18:18:42.14:597,42,0	1/1:3,24:26:57.19:810,57,0	1/1:1,7:7:18.06:255,18,0	1/1:4,3:7:20.80:252,21,0	1/1:8,9:17:32.88:410,33,0	1/1:9,13:21:56.86:673,57,0	1/1:0,8:8:18.06:255,18,0	1/1:2,8:10:11.52:137,12,0	1/1:3,18:22:8.47:375,8,0	1/1:0,6:6:15.05:214,15,0	1/1:3,9:12:30.09:406,30,0	1/1:1,9:10:19.31:259,19,0	1/1:1,2:3:6.01:70,6,0
chr10	47289428	.	AG	A	391.15	PASS	AB=1.000;AC=7;AF=0.130;AN=54;BaseQRankSum=-1.604;DP=348;FS=7.603;HRun=6;HaplotypeScore=71.7106;InbreedingCoeff=0.7326;MQ=77.59;MQ0=2;MQRankSum=0.470;QD=9.31;ReadPosRankSum=-2.092;VQSLOD=0.5058;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:33.99:0,34,414	1/1:0,2:2:6.02:64,6,0	0/1:21,0:14:15.37:15,0,243	0/0:31,0:23:19.77:0,20,215	0/0:9,0:9:8.98:0,9,116	0/0:14,0:14:30.08:0,30,376	0/0:17,0:17:30.08:0,30,367	1/1:1,9:10:27.07:290,27,0	0/0:7,0:6:15.05:0,15,196	0/0:7,0:7:15.05:0,15,196	0/0:12,0:12:21.06:0,21,263	0/0:10,0:10:18.05:0,18,222	0/0:8,0:6:9.01:0,9,101	0/0:8,0:6:18.04:0,18,209	1/1:2,7:9:15.03:159,15,0	0/0:16,0:16:33.10:0,33,419	0/0:23,0:22:57.13:0,57,696	0/0:8,1:8:21.07:0,21,272	0/0:6,0:6:12.04:0,12,158	0/0:17,0:17:39.13:0,39,511	0/0:24,1:23:60.18:0,60,772	0/0:11,0:11:24.08:0,24,312	0/0:10,0:10:15.05:0,15,197	0/0:18,1:19:27.09:0,27,354	0/0:6,0:6:18.05:0,18,222	0/0:10,1:11:21.03:0,21,245	0/0:13,0:13:26.98:0,27,292	./.
chr10	47289534	.	A	AAG	3894.68	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-11.934;DP=544;FS=0.000;HRun=0;HaplotypeScore=68.0262;InbreedingCoeff=0.9714;MQ=60.89;MQ0=39;MQRankSum=-0.205;QD=37.45;ReadPosRankSum=3.160;VQSLOD=5.7281;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:25:65.43:0,65,890	0/0:10,0:7:21.07:0,21,294	0/0:22,0:17:45.13:0,45,601	0/0:24,0:11:6.36:0,6,234	0/0:17,0:15:42.14:0,42,586	0/0:9,0:7:18.06:0,18,251	0/0:22,0:21:57.19:0,57,796	0/0:29,0:23:60.19:0,60,824	0/0:19,0:17:42.14:0,42,583	0/0:15,0:11:33.09:0,33,439	0/0:17,0:17:42.11:0,42,552	0/0:18,0:15:42.14:0,42,588	0/0:19,0:14:36.09:0,36,468	1/1:4,11:12:27.09:486,27,0	0/0:29,0:26:72.24:0,72,1000	0/0:19,0:17:51.16:0,51,693	0/0:17,0:14:42.14:0,42,588	0/0:17,0:14:39.13:0,39,546	1/1:4,6:9:21.07:363,21,0	1/1:1,13:14:36.12:632,36,0	1/1:8,24:29:43.49:1010,43,0	0/0:9,0:7:18.06:0,18,248	0/0:15,0:14:33.11:0,33,457	0/0:39,0:37:93.30:0,93,1285	0/0:14,0:13:36.12:0,36,502	0/0:17,0:15:33.11:0,33,460	1/1:0,32:32:78.27:1404,78,0	0/0:17,0:14:42.14:0,42,584
chr10	47292004	.	GC	G	3985.50	PASS	AB=0.687;AC=45;AF=0.804;AN=56;BaseQRankSum=-0.382;DP=559;FS=18.398;HRun=12;HaplotypeScore=84.7500;InbreedingCoeff=0.3768;MQ=73.09;MQ0=1;MQRankSum=0.141;QD=8.02;ReadPosRankSum=4.464;VQSLOD=0.8156;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:31:17.40:0,17,132	0/1:5,1:6:17.22:17,0,24	0/0:20,0:17:3.16:0,3,217	0/0:11,0:10:11.90:0,12,97	1/1:1,0:14:6.09:18,6,0	1/1:3,1:24:33.52:111,34,0	1/1:5,0:27:38.69:112,39,0	1/1:6,5:11:5.95:46,6,0	0/1:6,5:14:2.16:89,0,2	1/1:6,0:22:30.28:89,30,0	1/1:3,0:13:18.33:54,18,0	0/1:8,14:24:13.10:224,0,13	1/1:3,12:16:31.90:238,32,0	1/1:8,19:27:52.79:400,53,0	1/1:5,18:24:49.81:377,50,0	1/1:5,16:23:45.88:337,46,0	1/1:4,0:33:48.88:144,49,0	1/1:3,0:25:30.55:90,31,0	0/1:6,4:11:2.14:82,0,2	0/1:7,8:15:12.04:98,0,12	1/1:13,17:32:15.10:282,15,0	1/1:7,7:15:13.93:99,14,0	1/1:5,5:10:2.93:23,3,0	1/1:9,21:31:30.99:376,31,0	1/1:5,0:25:32.42:95,32,0	1/1:4,0:20:30.55:90,31,0	1/1:5,19:25:58.80:447,59,0	1/1:0,0:9:16.30:48,16,0
chr10	47292839	.	T	TA	7424.21	PASS	AB=1.000;AC=51;AF=0.911;AN=56;BaseQRankSum=-0.912;DP=486;FS=11.926;HRun=9;HaplotypeScore=76.1777;InbreedingCoeff=0.7641;MQ=74.85;MQ0=0;MQRankSum=-3.810;QD=16.50;ReadPosRankSum=2.418;VQSLOD=4.0821;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:24:68.90:0,69,584	1/1:2,1:7:11.43:58,11,0	0/1:13,0:13:9.11:9,0,66	0/0:11,0:9:11.75:0,12,82	1/1:4,15:20:38.94:412,39,0	1/1:2,2:26:65.71:365,66,0	1/1:2,0:21:48.29:241,48,0	1/1:4,20:25:36.93:609,37,0	1/1:2,0:12:20.06:101,20,0	1/1:4,13:17:16.02:393,16,0	1/1:4,15:19:19.09:438,19,0	1/1:3,1:11:19.86:101,20,0	1/1:3,0:13:33.93:171,34,0	1/1:3,0:13:22.73:114,23,0	1/1:4,1:25:40.01:202,40,0	1/1:0,0:15:40.16:204,40,0	1/1:2,31:33:32.45:811,32,0	1/1:1,13:14:36.10:398,36,0	1/1:7,1:19:43.06:272,43,0	1/1:1,2:21:57.29:329,57,0	1/1:1,1:8:17.04:85,17,0	1/1:2,0:12:20.95:114,21,0	1/1:4,0:14:28.25:141,28,0	1/1:5,0:20:37.27:188,37,0	1/1:3,16:19:48.60:532,49,0	1/1:1,20:20:60.14:653,60,0	1/1:7,0:20:33.75:171,34,0	1/1:0,11:12:29.91:312,30,0
chr10	47292951	.	G	GTTT	2592.43	PASS	AB=0.613;AC=24;AF=0.429;AN=56;BaseQRankSum=6.112;DP=521;FS=2.854;HRun=13;HaplotypeScore=97.7689;InbreedingCoeff=0.5794;MQ=72.97;MQ0=0;MQRankSum=-0.992;QD=9.75;ReadPosRankSum=-2.573;VQSLOD=0.4898;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:70.53:0,71,769	0/0:8,0:9:23.93:0,24,236	0/0:15,0:12:10.85:0,11,89	0/0:11,0:6:5.93:0,6,52	0/0:32,0:34:68.70:0,69,768	1/1:2,11:15:24.06:386,24,0	1/1:1,12:14:30.10:519,30,0	0/1:5,0:25:22.38:81,0,22	1/1:5,0:12:19.51:161,20,0	0/0:16,0:15:29.82:0,30,323	0/0:19,0:19:21.37:0,21,408	1/1:6,0:19:39.63:302,40,0	1/1:2,2:15:29.95:307,30,0	0/1:9,0:21:12.86:66,0,13	0/0:9,0:12:19.35:0,19,200	1/1:5,1:18:32.90:282,33,0	0/0:18,0:23:44.80:0,45,454	0/0:18,0:21:32.91:0,33,382	0/1:9,0:15:0.81:1,0,26	0/1:3,0:20:7.41:100,0,7	0/1:6,0:15:26.38:26,0,46	1/1:5,0:21:36.23:279,36,0	1/1:6,1:16:16.89:149,17,0	1/1:2,0:9:10.21:71,10,0	0/0:18,0:20:44.81:0,45,454	0/0:22,0:23:55.45:0,55,610	0/1:11,0:29:67.50:68,0,93	0/0:16,0:18:40.40:0,40,427
chr10	47293273	.	ATTT	A	12071.31	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-6.807;DP=609;FS=16.044;HRun=12;HaplotypeScore=106.6600;InbreedingCoeff=0.9790;MQ=71.53;MQ0=0;MQRankSum=-4.192;QD=27.50;ReadPosRankSum=4.225;VQSLOD=2.3229;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:41:99:0,105,1952	1/1:0,6:6:18.02:209,18,0	0/0:18,0:19:39:0,39,616	0/0:8,0:8:14.05:0,14,174	1/1:6,23:31:57.06:700,57,0	1/1:7,17:24:48.09:607,48,0	1/1:2,16:18:36.11:455,36,0	1/1:10,31:41:93.18:1147,93,0	1/1:1,18:19:48.13:607,48,0	1/1:6,19:24:54.59:667,55,0	1/1:4,22:26:51.08:644,51,0	1/1:2,22:24:63.20:796,63,0	1/1:6,24:30:59.95:758,60,0	0/0:2,0:17:16.20:0,16,35	1/1:2,10:12:30.08:379,30,0	1/1:0,14:14:36.12:455,36,0	1/1:3,17:20:42.10:531,42,0	1/1:3,15:18:39.10:493,39,0	0/0:7,0:23:22.31:0,22,91	0/0:2,0:23:28.41:0,28,96	0/0:3,0:11:7.48:0,7,16	1/1:4,15:19:33.05:417,33,0	1/1:3,20:23:54.16:682,54,0	1/1:3,23:26:55.10:684,55,0	1/1:1,22:23:54.15:682,54,0	1/1:5,22:27:63.14:780,63,0	0/0:7,0:27:26.67:0,27,76	1/1:2,11:13:30.07:379,30,0
chr10	47294476	.	GC	G	12573.52	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=10.736;DP=685;FS=9.774;HRun=4;HaplotypeScore=71.5612;InbreedingCoeff=0.9960;MQ=89.81;MQ0=0;MQRankSum=-3.273;QD=33.71;ReadPosRankSum=10.621;VQSLOD=2.3317;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,99,1418	0/0:8,0:8:21.07:0,21,302	0/0:26,0:26:72.18:0,72,977	0/0:24,1:25:66.19:0,66,940	0/0:10,0:10:21.06:0,21,294	1/1:0,12:12:33.11:428,33,0	1/1:0,32:32:90.29:1168,90,0	0/0:23,0:23:57.18:0,57,814	1/1:2,22:24:57.19:740,57,0	0/0:17,0:17:42.13:0,42,602	0/0:5,0:5:15.05:0,15,221	1/1:0,40:40:99:1439,111,0	1/1:1,28:29:78.23:1012,78,0	1/1:1,38:39:90.29:1166,90,0	0/0:31,0:31:90.20:0,90,1268	1/1:0,24:24:66.21:857,66,0	0/0:41,0:41:99:0,120,1740	0/0:40,0:40:99:0,120,1767	1/1:1,15:16:45.11:551,45,0	1/1:2,11:13:36.12:465,36,0	1/1:0,80:80:99:2686,208,0	1/1:0,13:13:27.09:350,27,0	1/1:0,10:10:24.08:311,24,0	1/1:1,32:33:84.27:1090,84,0	0/0:17,0:17:48.14:0,48,669	0/0:20,0:20:54.18:0,54,802	1/1:0,8:8:24.08:311,24,0	0/0:14,0:14:42.12:0,42,601
chr10	47297000	.	ACTTT	A	7735.17	PASS	AB=0.542;AC=15;AF=0.268;AN=56;BaseQRankSum=15.321;DP=660;FS=7.327;HRun=0;HaplotypeScore=108.9578;InbreedingCoeff=0.9253;MQ=85.85;MQ0=0;MQRankSum=-4.254;QD=41.14;ReadPosRankSum=3.742;VQSLOD=4.6537;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:90.29:0,90,2297	0/0:6,0:6:18.06:0,18,480	0/0:22,0:23:59.63:0,60,1260	0/0:21,0:21:51.17:0,51,1194	1/1:0,29:29:65.90:1111,66,0	0/0:24,0:24:69.22:0,69,1718	0/0:13,0:13:39.13:0,39,1010	0/0:30,0:30:78.25:0,78,1847	0/0:18,0:18:51.16:0,51,1305	1/1:4,22:26:63.16:1108,63,0	1/1:1,20:21:56.70:865,57,0	0/0:24,0:24:69.21:0,69,1663	0/0:31,0:31:93.26:0,93,2284	0/0:32,0:32:90.31:0,90,2352	0/0:18,0:18:54.19:0,54,1410	0/0:30,0:30:87.27:0,87,2149	1/1:0,29:29:60.21:1119,60,0	1/1:2,24:26:63.17:1140,63,0	0/0:17,0:17:48.14:0,48,1219	0/0:21,0:21:63.19:0,63,1539	0/0:30,0:30:90.29:0,90,2314	0/0:19,0:19:54.19:0,54,1326	0/0:19,0:19:57.15:0,57,1321	0/0:30,0:30:87.27:0,87,2145	1/1:1,19:20:48.02:819,48,0	1/1:1,23:24:66.19:1155,66,0	0/0:36,0:35:99:0,102,2520	0/1:2,11:13:6.36:417,0,6
chr10	47297212	.	CCCTTGACA	C	10299.26	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=15.922;DP=765;FS=3.638;HRun=0;HaplotypeScore=196.7377;InbreedingCoeff=0.9975;MQ=80.66;MQ0=0;MQRankSum=-14.902;QD=66.45;ReadPosRankSum=0.609;VQSLOD=4.9658;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:61,0:61:99:0,175,7416	0/0:8,0:8:21.07:0,21,913	0/0:17,0:17:48.16:0,48,1884	0/0:34,0:34:99:0,99,3605	1/1:0,22:22:54.19:1498,54,0	0/0:21,0:21:63.22:0,63,2751	0/0:36,0:36:99:0,108,4561	0/0:30,0:30:87.29:0,87,3655	0/0:22,0:22:63.22:0,63,2687	1/1:3,24:27:69.24:1954,69,0	1/1:0,11:11:30.10:814,30,0	0/0:38,0:38:99:0,111,4850	0/0:29,0:29:84.29:0,84,3627	0/0:24,0:24:66.23:0,66,2887	0/0:35,0:35:99:0,102,4335	0/0:26,0:26:78.27:0,78,3390	1/1:6,12:18:24.08:648,24,0	1/1:3,9:12:18.06:516,18,0	0/0:22,0:22:63.22:0,63,2534	0/0:25,0:25:72.25:0,72,3160	0/0:61,0:60:99:0,184,7222	0/0:28,0:28:84.29:0,84,3688	0/0:22,0:22:66.23:0,66,2814	0/0:44,0:44:99:0,132,5635	1/1:1,17:18:45.15:1237,45,0	1/1:0,33:33:99:2598,99,0	0/0:27,0:27:81.24:0,81,3332	1/1:0,14:14:36.12:1033,36,0
chr10	47297523	.	A	AT	3117.65	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-8.065;DP=622;FS=0.000;HRun=7;HaplotypeScore=62.8816;InbreedingCoeff=0.9920;MQ=75.47;MQ0=0;MQRankSum=0.222;QD=29.14;ReadPosRankSum=0.177;VQSLOD=4.0193;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:88.93:0,89,838	0/0:4,0:4:12.02:0,12,116	0/0:24,0:24:46.61:0,47,512	0/0:13,0:13:22.84:0,23,207	0/0:20,0:20:45.06:0,45,434	0/0:27,0:27:69.10:0,69,666	0/0:17,0:17:39.06:0,39,376	0/0:40,0:40:96.14:0,96,927	0/0:23,0:23:66.10:0,66,635	0/0:30,0:30:78.11:0,78,750	0/0:12,0:12:33.05:0,33,318	0/0:21,0:21:54.07:0,54,516	0/0:28,0:28:72.11:0,72,695	1/1:0,16:16:48.15:580,48,0	0/0:29,0:29:75.11:0,75,719	0/0:29,0:29:78.11:0,78,747	0/0:28,0:28:78.03:0,78,729	0/0:17,0:17:45.07:0,45,435	1/1:3,23:26:69.18:809,69,0	1/1:3,18:21:54.12:636,54,0	1/1:2,15:17:45.14:544,45,0	0/0:15,0:15:42.07:0,42,406	0/0:16,0:16:42.06:0,42,406	0/0:21,0:21:51.07:0,51,492	0/0:20,0:20:45.07:0,45,434	0/0:31,0:31:84.13:0,84,811	1/1:3,24:27:60.18:725,60,0	0/0:11,0:11:33.05:0,33,319
chr10	47297551	.	G	GT	288.92	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-1.403;DP=600;FS=1.087;HRun=10;HaplotypeScore=65.2775;InbreedingCoeff=0.8180;MQ=60.24;MQ0=23;MQRankSum=-0.380;QD=17.00;ReadPosRankSum=0.942;VQSLOD=4.1229;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:32:83.84:0,84,684	0/0:5,0:4:8.99:0,9,74	0/0:15,0:15:17.12:0,17,165	0/0:5,0:5:9.84:0,10,70	0/0:19,0:19:41.93:0,42,344	0/0:36,2:34:83.89:0,84,689	0/0:10,0:8:6.22:0,6,109	0/0:44,0:40:97.89:0,98,790	0/0:24,0:24:62.91:0,63,514	0/0:22,0:20:47.93:0,48,394	0/0:21,0:22:49.93:0,50,394	0/0:17,0:17:41.94:0,42,344	0/0:30,0:27:71.90:0,72,590	0/0:19,0:17:41.92:0,42,341	0/0:26,0:26:68.88:0,69,563	0/0:22,0:21:52.95:0,53,422	0/0:28,0:25:65.92:0,66,542	0/0:23,0:20:44.83:0,45,359	0/0:16,0:14:32.96:0,33,271	0/0:21,0:21:53.88:0,54,439	0/0:12,0:11:26.97:0,27,222	0/0:16,0:15:35.94:0,36,296	0/0:24,0:23:47.91:0,48,394	0/0:23,0:22:53.93:0,54,443	1/1:1,16:16:36.09:384,36,0	0/0:29,0:29:77.83:0,78,633	0/0:25,0:24:56.89:0,57,467	0/0:12,0:12:35.96:0,36,295
chr10	47297793	.	GTA	G	155.16	PASS	AC=8;AF=0.667;AN=12;BaseQRankSum=-3.005;DP=139;FS=14.564;HRun=0;HaplotypeScore=21.3511;MQ=79.32;MQ0=49;MQRankSum=-3.005;QD=8.62;ReadPosRankSum=2.298;VQSLOD=1.4793;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:4,0:1:0:0,0,0	0/0:27,0:14:12:0,12,72	./.	./.	./.	./.	./.	1/1:1,1:2:3.01:37,3,0	1/1:2,3:5:8.99:95,9,0	./.	./.	./.	./.	./.	./.	./.	./.	1/1:2,0:4:5.68:28,6,0	./.	./.	./.	./.	1/1:4,2:5:6.02:75,6,0	./.	./.	./.
chr10	47298782	.	CA	C	14840.11	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=13.312;DP=741;FS=7.670;HRun=1;HaplotypeScore=71.8807;InbreedingCoeff=0.9999;MQ=82.23;MQ0=0;MQRankSum=0.025;QD=37.38;ReadPosRankSum=2.734;VQSLOD=5.3620;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:93.32:0,93,1451	0/0:11,0:11:30.10:0,30,452	0/0:22,0:22:63.14:0,63,921	0/0:20,0:20:51.13:0,51,741	0/0:19,0:19:51.17:0,51,784	1/1:0,20:20:60.20:839,60,0	1/1:0,32:32:84.28:1174,84,0	0/0:34,0:34:99:0,102,1516	1/1:0,30:30:84.28:1174,84,0	0/0:16,0:16:48.15:0,48,731	0/0:14,0:14:39.13:0,39,595	1/1:0,25:25:69.23:964,69,0	1/1:0,20:20:51.04:713,51,0	1/1:0,44:44:99:1677,120,0	0/0:47,0:47:99:0,141,2154	1/1:0,26:26:69.23:965,69,0	0/0:28,0:28:84.27:0,84,1288	0/0:26,0:25:78.15:0,78,1164	1/1:1,23:24:69.11:901,69,0	1/1:0,29:29:84.19:1119,84,0	1/1:1,53:54:99:1940,141,0	1/1:0,17:17:42.14:573,42,0	1/1:0,18:18:45.15:621,45,0	1/1:0,46:46:99:1719,123,0	0/0:25,0:25:75.17:0,75,1096	0/0:36,0:36:99:0,105,1598	1/1:0,12:12:33.11:461,33,0	0/0:15,0:15:45.13:0,45,673
chr10	47302408	.	TA	T	512.16	PASS	AB=0.901;AC=8;AF=0.143;AN=56;BaseQRankSum=7.733;DP=581;FS=4.169;HRun=12;HaplotypeScore=64.2784;InbreedingCoeff=0.3476;MQ=72.06;MQ0=0;MQRankSum=0.343;QD=4.70;ReadPosRankSum=0.719;VQSLOD=1.4436;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,1:33:51.90:0,52,701	1/1:1,6:7:17.93:139,18,0	0/1:19,2:13:21.26:21,0,134	0/1:19,0:18:1.91:2,0,104	0/0:26,0:26:47.92:0,48,634	0/0:17,0:17:37.94:0,38,409	0/0:10,1:11:3.82:0,4,220	0/0:39,2:41:61.19:0,61,861	0/0:16,2:18:1.63:0,2,380	0/0:24,2:26:7.64:0,8,440	0/1:13,2:15:16.41:16,0,214	0/0:12,2:15:5.96:0,6,259	0/0:27,0:28:74.96:0,75,734	0/0:19,1:21:24.70:0,25,417	1/1:7,23:30:46.58:448,47,0	0/0:13,1:15:8.98:0,9,301	0/0:20,0:20:57.10:0,57,572	0/0:17,0:18:44.92:0,45,440	0/0:22,1:22:30.64:0,31,461	0/0:23,1:24:33.87:0,34,524	0/1:13,4:17:24.58:25,0,320	0/0:11,2:14:15.66:0,16,319	0/0:21,0:21:51.08:0,51,505	0/0:10,0:10:27.04:0,27,268	0/0:17,0:18:47.93:0,48,471	0/0:42,0:42:99:0,110,1162	0/0:26,0:26:66.99:0,67,655	0/0:5,0:5:12.02:0,12,122
chr10	47306708	.	G	GA	2282.12	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=12.101;DP=576;FS=5.806;HRun=2;HaplotypeScore=78.9467;InbreedingCoeff=0.9069;MQ=49.38;MQ0=16;MQRankSum=-11.843;QD=22.82;ReadPosRankSum=-0.193;VQSLOD=3.1205;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:87.28:0,87,1193	0/0:8,0:8:21.07:0,21,293	0/0:17,0:5:15.03:0,15,190	0/0:22,0:4:12.04:0,12,160	1/1:1,14:11:15.05:218,15,0	0/0:14,0:14:38.86:0,39,515	0/0:35,0:35:99:0,102,1365	1/1:3,4:2:3.01:44,3,0	0/0:20,0:20:57.18:0,57,781	1/1:0,19:14:39.13:572,39,0	1/1:0,19:15:30.10:439,30,0	0/0:27,0:27:75.14:0,75,1003	0/0:29,0:28:81.11:0,81,1063	0/0:23,0:22:63.17:0,63,858	0/0:32,0:32:93.28:0,93,1251	0/0:30,0:29:81.22:0,81,1091	1/1:0,3:3:9.03:132,9,0	1/1:0,2:2:3.01:43,3,0	0/0:21,0:13:39.13:0,39,544	0/0:16,0:16:48.16:0,48,670	0/0:41,0:40:99:0,120,1652	0/0:34,0:34:99:0,102,1382	0/0:20,0:20:57.18:0,57,780	0/0:31,0:31:93.31:0,93,1283	1/1:1,16:15:36.12:526,36,0	1/1:1,13:10:10.15:374,10,0	0/0:24,0:24:72.24:0,72,998	1/1:1,3:3:9.03:131,9,0
chr10	47306758	.	CTTA	C	1897.71	PASS	AC=16;AF=0.296;AN=54;BaseQRankSum=10.506;DP=444;FS=7.294;HRun=0;HaplotypeScore=90.4443;InbreedingCoeff=0.9446;MQ=66.49;MQ0=0;MQRankSum=-10.498;QD=33.89;ReadPosRankSum=2.727;VQSLOD=3.6969;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:54.12:0,54,1171	0/0:8,0:8:24.07:0,24,476	0/0:15,0:14:42.14:0,42,850	0/0:19,0:19:57.20:0,57,1245	1/1:0,5:5:6.02:100,6,0	0/0:9,0:9:27.09:0,27,611	0/0:26,0:26:78.27:0,78,1697	./.	0/0:18,0:18:51.17:0,51,1107	1/1:0,12:11:33.11:548,33,0	1/1:0,10:8:18.06:299,18,0	0/0:30,0:30:90.31:0,90,1952	0/0:26,0:26:72.25:0,72,1598	0/0:23,0:23:69.24:0,69,1525	0/0:35,0:35:99:0,102,2301	0/0:29,0:29:87.28:0,87,1928	1/1:0,3:3:9.03:150,9,0	1/1:0,3:3:6.02:100,6,0	0/0:10,0:10:30.10:0,30,639	0/0:10,0:10:30.10:0,30,679	0/0:25,0:25:72.25:0,72,1600	0/0:14,0:14:39.13:0,39,788	0/0:12,0:12:33.11:0,33,717	0/0:35,0:35:99:0,102,2142	1/1:0,8:8:21.07:349,21,0	1/1:0,9:7:21.07:349,21,0	0/0:20,0:20:60.19:0,60,1286	1/1:1,5:5:12.04:196,12,0
chr10	47306920	.	TA	T	5122.53	PASS	AB=0.609;AC=13;AF=0.241;AN=54;BaseQRankSum=15.733;DP=868;FS=18.526;HRun=3;HaplotypeScore=94.9229;InbreedingCoeff=0.4901;MQ=49.63;MQ0=60;MQRankSum=-4.935;QD=18.83;ReadPosRankSum=3.135;VQSLOD=3.6463;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:69,0:61:99:0,162,2252	0/0:16,0:16:45.15:0,45,642	./.	0/0:16,0:2:5.75:0,6,43	1/1:0,23:17:30.09:372,30,0	0/0:23,0:23:66.17:0,66,879	0/0:39,0:33:63.18:0,63,869	0/1:24,15:21:99:423,0,119	0/0:26,0:25:75.25:0,75,1077	1/1:3,23:23:48.15:589,48,0	1/1:2,19:20:51.16:621,51,0	0/0:38,0:37:99:0,108,1538	0/0:34,0:33:99:0,99,1375	0/0:40,0:40:99:0,117,1676	0/0:40,0:38:99:0,111,1562	0/0:31,0:31:93.31:0,93,1335	0/1:9,28:32:41.04:629,0,41	0/1:24,31:43:99:932,0,172	0/0:17,0:11:33.11:0,33,475	0/0:27,0:27:75.24:0,75,1060	0/0:44,0:36:84.28:0,84,1201	0/0:22,0:20:57.19:0,57,820	0/0:19,0:19:51.17:0,51,734	0/0:54,0:50:99:0,135,1898	1/1:4,22:22:42.13:521,42,0	0/1:3,25:26:14.02:725,0,14	0/0:23,0:22:66.21:0,66,933	0/1:5,12:15:11.95:313,0,12
chr10	47308576	.	C	CGT	1903.67	PASS	AB=0.609;AC=19;AF=0.352;AN=54;BaseQRankSum=3.593;DP=625;FS=30.849;HRun=0;HaplotypeScore=112.3010;InbreedingCoeff=0.8293;MQ=65.18;MQ0=9;MQRankSum=-5.619;QD=8.77;ReadPosRankSum=-4.801;VQSLOD=0.8140;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:71.75:0,72,786	1/1:3,5:9:15.05:235,15,0	0/0:32,0:13:8.89:0,9,72	0/0:24,0:16:12.14:0,12,130	1/1:19,0:20:3.01:43,3,0	0/0:20,0:20:48.12:0,48,539	0/0:20,0:23:50.81:0,51,552	1/1:43,0:42:41.94:382,42,0	0/0:24,0:25:63:0,63,701	1/1:27,0:22:26.34:183,26,0	1/1:12,0:12:3.01:39,3,0	0/0:24,0:24:63.17:0,63,723	0/0:26,0:27:69.01:0,69,771	0/0:21,1:22:12.80:0,13,560	0/1:10,18:28:18.82:654,0,19	0/0:28,0:28:60.18:0,60,699	1/1:15,0:15:11.70:110,12,0	1/1:20,0:22:15.47:139,15,0	0/0:21,0:23:32.41:0,32,336	0/0:18,0:19:35.94:0,36,399	0/0:25,0:25:63.19:0,63,735	0/0:13,0:13:24.04:0,24,266	0/0:11,0:12:26.90:0,27,282	0/0:21,0:23:38.37:0,38,388	1/1:18,0:17:11.94:116,12,0	1/1:19,0:15:23.97:202,24,0	0/0:26,0:25:50.98:0,51,573	./.
chr10	47310240	.	AAAGG	A	4329.74	PASS	AB=1.000;AC=38;AF=0.704;AN=54;BaseQRankSum=5.659;DP=644;FS=4.153;HRun=0;HaplotypeScore=170.4100;InbreedingCoeff=0.3519;MQ=56.32;MQ0=0;MQRankSum=-0.279;QD=8.98;ReadPosRankSum=-2.929;VQSLOD=3.7855;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:50.92:0,51,856	0/0:15,0:14:32.87:0,33,459	./.	0/0:16,0:9:0:0,0,0	1/1:29,0:29:33.74:223,34,0	0/1:15,0:15:48.98:49,0,133	0/0:33,0:33:10.53:0,11,304	1/1:7,0:18:22.13:172,22,0	1/1:19,0:19:11.96:135,12,0	1/1:20,0:20:17.82:140,18,0	1/1:16,0:16:19.05:149,19,0	1/1:26,8:34:53.90:607,54,0	1/1:10,22:32:45.02:640,45,0	0/1:31,0:31:94.35:237,0,94	0/0:46,0:46:99:0,100,1349	1/1:14,21:35:18.06:284,18,0	1/1:24,0:25:5.95:52,6,0	1/1:19,0:19:12.03:135,12,0	0/1:12,0:12:42.80:43,0,64	0/1:23,0:23:75.20:90,0,75	0/1:25,0:25:99:105,0,243	1/1:7,11:18:14.71:145,15,0	1/1:10,8:18:11.96:159,12,0	1/1:31,2:33:44.59:376,45,0	1/1:26,0:26:23.90:222,24,0	1/1:12,0:12:20.67:169,21,0	0/1:20,0:20:62.06:172,0,62	1/1:2,0:2:3:25,3,0
chr10	47310272	.	GAAGGAAGCAAGCAAGCAAGC	G	7308.92	PASS	AB=1.000;AC=22;AF=0.393;AN=56;BaseQRankSum=-1.852;DP=661;FS=0.808;HRun=0;HaplotypeScore=371.9499;InbreedingCoeff=0.6563;MQ=52.04;MQ0=5;MQRankSum=-0.173;QD=24.36;ReadPosRankSum=-5.858;VQSLOD=0.9819;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:33:90.30:0,90,5586	0/0:16,0:15:36.53:0,37,1803	0/0:9,0:6:18.06:0,18,508	0/0:14,0:5:9.03:0,9,298	1/1:3,24:27:47.74:1321,48,0	0/1:21,0:20:99:230,0,1317	0/1:31,0:31:99:181,0,2116	1/1:16,0:16:18.84:353,19,0	0/0:15,0:15:42.11:0,42,1991	1/1:1,11:12:26.84:480,27,0	1/1:0,13:13:29.87:879,30,0	0/1:33,0:33:15.59:16,0,3781	0/0:34,0:34:78.24:0,78,4392	0/0:32,0:32:79.76:0,80,3384	0/0:44,0:44:99:0,121,5385	0/0:33,0:33:51.17:0,51,2513	1/1:2,27:29:5.91:186,6,0	1/1:1,20:21:15.05:724,15,0	0/0:17,0:14:22.28:0,22,712	0/0:20,0:19:29.64:0,30,1510	0/0:40,0:38:85.13:0,85,4169	0/0:16,0:16:5.14:0,5,1645	0/0:15,0:15:29.33:0,29,1540	0/1:43,0:43:30.47:30,0,3154	1/1:1,27:28:23.98:963,24,0	1/1:0,15:15:39.11:1142,39,0	0/0:22,0:22:50.24:0,50,2023	1/1:11,0:11:30.10:803,30,0
chr10	47310279	.	GCAA	G	1620.23	PASS	AB=0.953;AC=18;AF=0.321;AN=56;BaseQRankSum=1.774;DP=685;FS=24.392;HRun=0;HaplotypeScore=203.8906;InbreedingCoeff=0.0009;MQ=53.20;MQ0=5;MQRankSum=3.873;QD=4.68;ReadPosRankSum=4.880;VQSLOD=1.1290;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:35:99:0,105,2028	0/0:16,0:15:25.27:0,25,367	0/0:16,0:11:18.80:0,19,489	0/0:18,0:7:21.03:0,21,354	0/1:24,0:24:15.35:15,0,222	0/1:17,2:18:50.16:93,0,50	0/1:29,1:30:98.58:99,0,180	0/1:21,0:21:6.42:6,0,229	0/0:16,0:16:47.59:0,48,857	0/1:11,0:11:8.35:8,0,170	0/1:13,0:13:30.49:30,0,115	0/0:36,0:36:99:0,101,1534	0/0:35,0:35:77.56:0,78,1017	1/1:25,9:34:14.15:441,14,0	0/0:45,0:45:28.49:0,28,1026	0/0:36,0:36:60.22:0,60,953	0/1:28,0:28:11.69:12,0,66	1/1:21,0:21:14.74:97,15,0	0/1:15,3:15:69.91:70,0,142	0/1:14,2:16:10.89:146,0,11	0/1:36,7:41:87.66:365,0,88	0/0:18,0:18:41.11:0,41,695	0/0:15,0:15:27.91:0,28,434	0/0:42,0:42:99:0,111,1802	0/1:28,0:28:67.09:77,0,67	0/1:15,0:15:27.27:27,0,157	1/1:18,6:24:7.10:303,7,0	0/0:10,0:10:2.42:0,2,38
chr10	47316357	.	C	CTTTG	1633.67	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-4.708;DP=841;FS=0.739;HRun=0;HaplotypeScore=131.9770;InbreedingCoeff=0.9995;MQ=82.29;MQ0=0;MQRankSum=-4.861;QD=38.90;ReadPosRankSum=-5.965;VQSLOD=2.4256;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,135,2344	0/0:13,0:13:33.09:0,33,547	0/0:31,0:31:60.20:0,60,985	0/0:24,0:25:63.04:0,63,1006	0/0:32,0:32:81.26:0,81,1385	0/0:24,0:24:57.16:0,57,935	0/0:24,0:24:57.16:0,57,967	1/1:22,14:42:78.20:1729,78,0	0/0:26,0:26:63.20:0,63,1076	0/0:39,0:39:99:0,99,1735	0/0:21,0:21:45.14:0,45,744	0/0:42,0:42:99:0,114,1968	0/0:45,0:45:99:0,117,2051	0/0:21,0:21:51.15:0,51,864	0/0:38,0:38:99:0,102,1703	0/0:36,0:36:90.29:0,90,1543	0/0:26,0:26:72.23:0,72,1234	0/0:21,0:21:48.15:0,48,813	0/0:37,0:37:87.28:0,87,1459	0/0:21,0:21:57.20:0,57,999	0/0:51,0:51:99:0,129,2221	0/0:29,0:29:78.21:0,78,1306	0/0:21,0:21:60.21:0,60,1051	0/0:36,0:36:96.33:0,96,1676	0/0:23,0:23:66.23:0,66,1157	0/0:33,0:33:87.30:0,87,1507	0/0:24,0:24:63.22:0,63,1104	0/0:12,0:12:33.11:0,33,578
chr10	47316769	.	G	GA	912.19	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-8.454;DP=743;FS=3.244;HRun=8;HaplotypeScore=69.1525;InbreedingCoeff=0.9717;MQ=73.39;MQ0=0;MQRankSum=-0.571;QD=24.00;ReadPosRankSum=-5.158;VQSLOD=1.9705;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,132,1208	0/0:6,0:6:18.01:0,18,164	0/0:13,0:13:30.01:0,30,272	0/0:12,1:13:14.09:0,14,203	0/0:37,0:37:90.04:0,90,824	0/0:23,0:23:60.01:0,60,545	0/0:17,0:18:44.05:0,44,390	1/1:7,31:38:90.22:1007,90,0	0/0:13,0:13:36:0,36,324	0/0:29,0:29:66.02:0,66,604	0/0:25,0:25:72.03:0,72,655	0/0:38,0:38:99:0,99,901	0/0:32,0:32:93.03:0,93,846	0/0:29,0:29:78.02:0,78,707	0/0:38,0:38:99:0,102,915	0/0:43,0:43:99:0,114,1039	0/0:18,0:18:54.03:0,54,494	0/0:26,0:26:72.03:0,72,659	0/0:19,0:19:39.01:0,39,357	0/0:33,0:33:81:0,81,731	0/0:26,1:27:28.41:0,28,515	0/0:35,0:35:96.05:0,96,879	0/0:25,0:25:66.03:0,66,604	0/0:27,0:27:78.04:0,78,714	0/0:21,0:21:57.03:0,57,522	0/0:29,0:29:78.03:0,78,711	0/0:19,0:19:51.02:0,51,467	0/0:18,0:18:51.03:0,51,466
chr10	47317074	.	CT	C	4772.80	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=10.431;DP=707;FS=7.930;HRun=2;HaplotypeScore=70.9557;InbreedingCoeff=0.9990;MQ=85.71;MQ0=0;MQRankSum=-4.850;QD=35.35;ReadPosRankSum=2.283;VQSLOD=5.2535;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,144,2157	0/0:7,0:7:21.07:0,21,314	0/0:32,0:32:90.20:0,90,1277	0/0:30,0:30:78.24:0,78,1133	0/0:21,0:21:60.19:0,60,878	0/0:20,0:20:57.15:0,57,794	0/0:16,0:16:48.16:0,48,717	0/0:23,0:23:69.22:0,69,1000	0/0:20,0:20:60.20:0,60,899	0/0:20,0:20:57.19:0,57,855	0/0:28,0:28:84.27:0,84,1237	0/0:32,0:32:96.29:0,96,1398	0/0:17,0:17:51.17:0,51,763	1/1:0,26:26:72.23:934,72,0	0/0:45,0:45:99:0,135,1958	0/0:37,0:37:99:0,108,1618	0/0:21,0:21:63.20:0,63,921	0/0:27,0:27:81.26:0,81,1191	1/1:2,21:23:63.19:804,63,0	1/1:1,23:24:66.21:853,66,0	1/1:1,32:33:90.29:1169,90,0	0/0:25,0:25:75.24:0,75,1104	0/0:22,0:22:66.21:0,66,968	0/0:26,0:26:78.22:0,78,1143	0/0:15,0:15:42.12:0,42,608	0/0:26,0:26:75.25:0,75,1124	1/1:0,29:29:78.25:1013,78,0	0/0:14,0:14:42.14:0,42,630
chr10	47319000	.	GT	G	2526.27	PASS	AB=1.000;AC=25;AF=0.446;AN=56;BaseQRankSum=3.343;DP=423;FS=11.485;HRun=12;HaplotypeScore=70.0033;InbreedingCoeff=0.8202;MQ=68.96;MQ0=1;MQRankSum=-0.802;QD=13.58;ReadPosRankSum=3.597;VQSLOD=3.1639;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:33.01:0,33,318	1/1:3,5:8:11.94:92,12,0	0/0:12,0:9:1.68:0,2,55	0/1:11,0:9:20.56:21,0,50	1/1:3,14:17:32.85:257,33,0	1/1:4,12:16:26.88:209,27,0	1/1:3,18:22:49.82:377,50,0	0/0:18,0:18:33.07:0,33,335	0/0:14,1:16:3.65:0,4,204	1/1:3,6:9:17.92:139,18,0	1/1:1,9:11:19.94:145,20,0	0/0:15,0:16:35.90:0,36,342	0/0:17,0:17:42:0,42,400	0/0:11,0:11:24.05:0,24,244	1/1:2,18:20:47.84:379,48,0	0/0:19,1:20:19.28:0,19,356	1/1:4,12:16:2.43:202,2,0	1/1:2,18:21:43.88:336,44,0	0/0:17,0:18:50.93:0,51,496	0/0:21,0:21:51.08:0,51,510	0/0:20,0:21:20.63:0,21,249	0/0:7,0:8:23.88:0,24,227	0/0:14,0:14:14.99:0,15,141	0/0:16,0:17:29.72:0,30,261	1/1:0,6:7:16.98:122,17,0	1/1:2,20:22:53.73:417,54,0	0/0:9,0:8:12.02:0,12,121	1/1:1,5:6:5.96:46,6,0
chr10	47320664	.	GA	G	2826.02	PASS	AB=0.966;AC=23;AF=0.411;AN=56;BaseQRankSum=12.452;DP=580;FS=0.000;HRun=11;HaplotypeScore=113.1725;InbreedingCoeff=0.9040;MQ=64.55;MQ0=8;MQRankSum=-2.043;QD=12.13;ReadPosRankSum=1.677;VQSLOD=3.2289;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,1:19:21.98:0,22,412	1/1:9,2:10:23.74:135,24,0	0/1:26,1:15:10.20:10,0,118	0/0:34,0:19:5.78:0,6,97	1/1:8,16:24:22.44:350,22,0	0/0:16,1:17:20.47:0,20,423	0/0:19,0:18:42.11:0,42,448	1/1:7,11:18:29.91:242,30,0	0/0:16,0:18:44.10:0,44,487	1/1:5,13:18:44.24:334,44,0	1/1:5,23:28:48.66:475,49,0	0/0:19,0:19:48.04:0,48,479	0/0:24,0:24:59.82:0,60,604	0/0:15,0:15:38.94:0,39,387	1/1:18,0:18:26.93:98,27,0	0/0:20,0:20:58.03:0,58,607	1/1:6,17:23:45.82:370,46,0	1/1:5,11:15:16.19:231,16,0	0/0:19,1:18:20.45:0,20,407	0/0:32,1:33:62.47:0,62,830	0/0:6,0:6:12.03:0,12,128	0/0:21,0:22:56.95:0,57,580	0/0:16,1:17:12.05:0,12,374	0/0:23,0:23:57.13:0,57,600	1/1:8,9:17:24.56:219,25,0	1/1:5,15:21:44.27:350,44,0	0/0:37,0:39:99:0,104,999	1/1:2,9:11:29.79:236,30,0
chr10	47320670	.	AAAAAACAAAAAAAC	A	2117.62	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=2.381;DP=583;FS=7.730;HRun=0;HaplotypeScore=266.6371;InbreedingCoeff=0.5100;MQ=64.24;MQ0=8;MQRankSum=-3.064;QD=22.53;ReadPosRankSum=-2.116;VQSLOD=0.9560;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:21:60.16:0,60,3025	1/1:4,6:9:27.04:790,27,0	0/0:30,0:16:14.44:0,14,662	0/0:41,0:21:29.92:0,30,645	0/0:26,0:26:22.23:0,22,2201	0/0:15,0:15:45.15:0,45,2402	0/0:16,0:15:42.14:0,42,1809	0/1:15,0:15:33.32:33,0,869	0/0:18,0:18:54.18:0,54,2808	0/0:20,0:20:5.89:0,6,1783	0/1:27,0:27:11.46:11,0,1842	0/0:17,0:17:51.17:0,51,3032	0/0:24,0:24:69.23:0,69,3697	0/0:16,0:16:45.15:0,45,2221	1/1:6,15:21:26.19:1415,26,0	0/0:24,0:24:71.91:0,72,3812	0/0:23,0:23:54.66:0,55,2089	0/0:16,0:15:39.11:0,39,1489	0/0:18,0:16:45.15:0,45,2241	0/0:30,0:30:87.22:0,87,4861	0/0:4,0:4:12.04:0,12,636	0/0:21,0:21:60.21:0,60,3600	0/0:20,0:20:60.20:0,60,2950	0/0:22,0:22:60.17:0,60,2864	0/0:17,0:17:47.02:0,47,1994	0/1:21,0:21:4.85:5,0,1824	0/0:36,0:36:99:0,108,5916	0/0:11,0:11:33.11:0,33,1561
chr10	47320716	.	CA	C	2320.19	PASS	AB=0.860;AC=16;AF=0.286;AN=56;BaseQRankSum=5.888;DP=569;FS=2.468;HRun=10;HaplotypeScore=131.8228;InbreedingCoeff=0.7699;MQ=48.80;MQ0=30;MQRankSum=-4.419;QD=12.08;ReadPosRankSum=0.518;VQSLOD=2.6246;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:19:48.09:0,48,501	0/0:10,0:9:24.06:0,24,256	0/0:35,0:7:0:0,0,1	0/1:46,0:6:5.76:6,0,12	1/1:7,11:17:38.96:330,39,0	0/0:11,0:10:18.51:0,19,192	0/0:17,0:17:42.05:0,42,401	0/0:28,0:27:59.99:0,60,610	0/0:17,0:17:36.01:0,36,372	1/1:7,10:16:20.63:290,21,0	1/1:11,10:19:44.72:373,45,0	0/0:23,0:23:60.13:0,60,634	0/0:22,0:22:50.90:0,51,523	0/0:10,0:10:23.79:0,24,182	0/0:28,0:27:56.03:0,56,466	0/0:27,0:27:64.17:0,64,656	1/1:11,9:21:47.52:411,48,0	0/1:11,7:16:9.88:241,0,10	0/0:18,0:18:35.03:0,35,227	0/0:26,0:26:53.80:0,54,391	0/0:6,0:4:5.96:0,6,51	0/0:17,0:17:4.77:0,5,328	0/0:22,0:22:59.99:0,60,611	0/0:10,0:10:15.09:0,15,135	1/1:11,10:21:5.58:290,6,0	1/1:8,9:15:32.99:285,33,0	0/0:29,0:27:65.33:0,65,503	1/1:4,8:11:32.99:286,33,0
chr10	47320728	.	CAA	C	2147.67	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=1.800;DP=597;FS=0.000;HRun=15;HaplotypeScore=136.9122;InbreedingCoeff=0.9083;MQ=56.64;MQ0=33;MQRankSum=-4.553;QD=14.51;ReadPosRankSum=0.438;VQSLOD=1.8540;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:18:47.87:0,48,594	0/0:2,0:9:24.04:0,24,235	0/0:56,0:16:0.77:0,1,85	0/0:59,2:8:14.95:0,15,131	1/1:6,12:17:41.91:367,42,0	0/0:13,0:12:18.09:0,18,324	0/0:17,0:18:44.12:0,44,546	0/0:31,0:30:51.90:0,52,525	0/0:9,0:12:28.03:0,28,267	1/1:7,12:21:44.65:374,45,0	1/1:12,9:21:47.28:381,47,0	0/0:19,0:20:53.56:0,54,658	0/0:19,0:19:43.38:0,43,559	0/0:6,0:10:12.02:0,12,126	0/0:17,0:26:54.46:0,54,455	0/0:21,0:24:38.31:0,38,592	1/1:8,10:18:8.40:211,8,0	1/1:6,7:14:24.81:202,25,0	0/0:8,0:20:54.06:0,54,555	0/0:7,0:25:66:0,66,653	0/0:5,0:3:2.97:0,3,20	0/0:16,0:17:33.04:0,33,391	0/0:18,0:20:59.63:0,60,711	0/0:9,0:9:13.80:0,14,146	1/1:5,13:19:44.37:360,44,0	1/1:10,6:17:23.01:258,23,0	0/0:18,0:27:66.03:0,66,669	1/1:6,7:13:23.65:196,24,0
chr10	47320966	.	GCTGTTACACAGAGAAACCCTATCTTA	G	26356	PASS	AC=30;AF=0.556;AN=54;BaseQRankSum=15.620;DP=481;FS=0.000;HRun=0;HaplotypeScore=351.1756;InbreedingCoeff=0.9609;MQ=63.45;MQ0=0;MQRankSum=-15.486;QD=179.29;ReadPosRankSum=5.236;VQSLOD=3.9412;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,129,13775	1/1:0,7:7:15.05:1007,15,0	0/0:26,0:24:69.24:0,69,4184	0/0:24,0:23:68.16:0,68,4534	1/1:1,6:7:21.07:1267,21,0	0/0:20,0:20:60.21:0,60,6840	0/0:19,0:19:57.17:0,57,5461	1/1:1,0:1:2.96:19,3,0	0/0:23,0:23:69.22:0,69,7763	1/1:0,6:6:15.05:1083,15,0	1/1:0,7:7:18.06:1270,18,0	0/0:32,0:32:96.33:0,96,10680	0/0:32,0:32:93.32:0,93,10708	1/1:0,21:21:51.18:3674,51,0	1/1:1,14:15:45.15:3124,45,0	0/0:36,0:36:99:0,105,11037	1/1:1,13:14:24.08:1703,24,0	1/1:1,4:5:12.04:866,12,0	1/1:2,6:8:24.08:1400,24,0	1/1:0,13:13:36.12:2548,36,0	1/1:0,5:5:15.05:1050,15,0	0/0:21,0:21:63.22:0,63,7328	0/0:15,0:15:45.15:0,45,5150	0/0:42,0:42:99:0,123,13484	1/1:0,8:8:21.07:1505,21,0	1/1:0,9:9:27.09:1946,27,0	1/1:0,21:21:54.19:3895,54,0	./.
chr10	47320998	.	G	GA	5499.57	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=12.561;DP=611;FS=6.030;HRun=5;HaplotypeScore=192.9560;InbreedingCoeff=0.9816;MQ=60.84;MQ0=0;MQRankSum=-14.787;QD=21.40;ReadPosRankSum=-1.202;VQSLOD=2.3957;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,135,1430	1/1:7,0:7:17.64:128,18,0	0/0:22,0:19:54.06:0,54,536	0/0:19,0:19:44.82:0,45,415	1/1:7,3:10:17.59:155,18,0	0/0:26,0:26:75.15:0,75,782	0/0:20,0:20:57.14:0,57,611	1/1:1,23:24:72.16:835,72,0	0/0:26,0:26:69.15:0,69,729	1/1:8,11:19:44.60:441,45,0	1/1:10,0:10:23.75:215,24,0	0/0:33,0:33:99:0,99,1042	0/0:38,0:38:99:0,102,1075	1/1:21,4:25:42.86:371,43,0	1/1:14,14:28:66.06:462,66,0	0/0:36,0:36:99:0,105,1120	1/1:14,4:18:38.11:305,38,0	1/1:5,4:9:20.78:187,21,0	1/1:6,7:14:40.32:344,40,0	1/1:15,3:18:44.73:436,45,0	1/1:6,6:12:26.98:301,27,0	0/0:24,0:24:60.04:0,60,634	0/0:21,0:21:53.21:0,53,569	0/0:40,0:40:99:0,111,1165	1/1:8,2:11:29.41:218,29,0	1/1:10,15:25:71.56:683,72,0	1/1:21,4:25:60.42:379,60,0	1/1:1,1:2:5.93:40,6,0
chr10	47321471	.	G	GTTTCAAAAGGACCA	68351.19	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-8.284;DP=809;FS=4.158;HRun=0;HaplotypeScore=255.4165;InbreedingCoeff=0.9993;MQ=74.12;MQ0=0;MQRankSum=-19.351;QD=136.16;ReadPosRankSum=-1.833;VQSLOD=3.8514;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,163,6208	1/1:3,7:16:30.10:2036,30,0	0/0:23,0:23:69.23:0,69,2278	0/0:22,0:22:66.15:0,66,1960	1/1:6,15:28:61.05:3648,61,0	1/1:4,16:28:60.21:3916,60,0	1/1:18,10:36:78.27:4713,78,0	1/1:24,3:53:99:8004,156,0	0/0:21,0:21:63.20:0,63,2527	1/1:8,10:29:75.65:3980,76,0	1/1:4,17:36:72.07:3823,72,0	0/0:33,0:33:93.32:0,93,3762	0/0:28,0:28:84.27:0,84,3398	1/1:10,19:34:87.30:5599,87,0	1/1:4,15:33:54.19:3793,54,0	0/0:34,0:34:99:0,99,3894	1/1:5,6:18:33.11:2114,33,0	1/1:5,4:15:24.08:1510,24,0	1/1:7,10:29:84.21:3984,84,0	1/1:5,14:29:54.18:3515,54,0	1/1:8,4:20:36.12:2338,36,0	0/0:39,0:39:99:0,111,4168	0/0:24,0:24:66.22:0,66,2657	0/0:29,0:28:87.28:0,87,3395	1/1:7,14:25:60.21:4055,60,0	1/1:9,16:35:96.23:5756,96,0	1/1:8,13:28:60.16:3909,60,0	1/1:1,7:10:24.08:1658,24,0
chr10	47323045	.	GATTT	G	1261.33	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=4.151;DP=570;FS=0.000;HRun=0;HaplotypeScore=97.4021;InbreedingCoeff=0.9657;MQ=62.26;MQ0=3;MQRankSum=-1.161;QD=28.67;ReadPosRankSum=1.647;VQSLOD=3.5643;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:28:75.26:0,75,1900	0/0:6,0:6:12.04:0,12,310	0/0:10,0:8:12.04:0,12,277	0/0:11,0:8:21.04:0,21,468	0/0:35,0:35:87.30:0,87,2216	1/1:5,20:25:45.15:795,45,0	1/1:4,15:19:33.11:587,33,0	0/0:41,0:41:99:0,108,2606	0/0:20,0:20:54.14:0,54,1233	0/0:33,0:33:87.29:0,87,2078	0/0:17,0:17:48.16:0,48,1231	0/0:21,0:21:63.16:0,63,1514	0/0:16,0:16:39.13:0,39,965	0/0:21,0:21:60.21:0,60,1515	0/0:35,0:35:93.32:0,93,2348	0/0:27,0:27:69.21:0,69,1675	0/0:28,0:28:78.27:0,78,1982	0/0:17,0:16:42.14:0,42,1033	0/0:21,0:20:48.10:0,48,1118	0/0:15,0:15:42.14:0,42,1062	0/0:16,0:16:42.14:0,42,1075	0/0:11,0:11:27.09:0,27,613	0/0:10,0:10:30.10:0,30,772	0/0:13,0:13:30.10:0,30,751	0/0:18,0:18:48.16:0,48,1235	0/0:22,0:22:60.21:0,60,1536	0/0:24,0:24:69.24:0,69,1737	0/0:10,0:10:30.10:0,30,749
chr10	47323224	.	C	CCAA	2193.45	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-7.695;DP=688;FS=4.897;HRun=0;HaplotypeScore=94.7203;InbreedingCoeff=0.9905;MQ=62.68;MQ0=0;MQRankSum=-0.870;QD=48.74;ReadPosRankSum=1.184;VQSLOD=5.6328;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:87.28:0,87,1319	1/1:0,11:11:30.10:645,30,0	0/0:21,0:17:38.38:0,38,642	0/0:25,0:24:15.17:0,15,698	0/0:35,0:35:87.29:0,87,1343	0/0:28,0:28:78.25:0,78,1186	0/0:29,0:29:78.24:0,78,1181	0/0:33,0:33:78.26:0,78,1202	0/0:23,0:23:66.22:0,66,1016	0/0:18,0:18:42.14:0,42,628	0/0:18,0:18:48.16:0,48,742	0/0:28,0:28:72.23:0,72,1093	0/0:17,0:17:48.16:0,48,743	0/0:24,0:24:69.23:0,69,1063	1/1:6,26:34:78.27:1670,78,0	0/0:29,0:29:78.23:0,78,1163	0/0:30,0:30:87.30:0,87,1345	0/0:19,0:19:57.19:0,57,874	0/0:33,0:33:81.22:0,81,1162	0/0:23,0:23:57.19:0,57,882	0/0:33,0:33:78.26:0,78,1204	0/0:11,0:11:30.10:0,30,461	0/0:22,0:22:60.20:0,60,928	0/0:30,0:30:87.25:0,87,1320	0/0:17,0:17:48.15:0,48,717	0/0:24,0:24:66.21:0,66,1000	0/0:30,0:30:78.26:0,78,1207	0/0:11,0:11:24.08:0,24,369
chr10	47324505	.	T	TTAGCACTAAATGCTTG	3412.76	PASS	AB=0.768;AC=36;AF=0.947;AN=38;BaseQRankSum=-3.359;DP=58;FS=16.024;HRun=0;HaplotypeScore=34.3892;InbreedingCoeff=-0.1804;MQ=154.85;MQ0=0;MQRankSum=-2.612;QD=59.87;ReadPosRankSum=-1.030;VQSLOD=1.2473;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/1:8,1:11:90.98:851,0,91	0/1:6,0:9:37.07:646,0,37	1/1:1,0:1:3.01:124,3,0	1/1:2,0:2:5.98:70,6,0	1/1:5,0:5:15:193,15,0	1/1:3,0:3:9.02:185,9,0	1/1:2,0:2:2.98:21,3,0	1/1:2,0:2:6.01:141,6,0	1/1:2,0:2:6.01:76,6,0	./.	1/1:1,0:1:3.01:50,3,0	1/1:2,0:2:3.01:110,3,0	./.	./.	./.	1/1:2,0:2:6.02:88,6,0	./.	1/1:2,0:2:6.02:199,6,0	1/1:2,0:2:6.02:159,6,0	1/1:2,0:2:6.01:77,6,0	1/1:3,0:3:9.02:150,9,0	1/1:3,0:3:3.01:74,3,0	1/1:2,0:2:6.01:146,6,0	1/1:1,0:1:3.01:54,3,0	./.	./.
chr10	47325520	.	G	GAT	1332.79	PASS	AB=0.950;AC=5;AF=0.089;AN=56;BaseQRankSum=8.206;DP=560;FS=1.641;HRun=0;HaplotypeScore=62.7814;InbreedingCoeff=0.8213;MQ=53.28;MQ0=25;MQRankSum=0.242;QD=28.36;ReadPosRankSum=1.604;VQSLOD=4.3394;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:41:99:0,120,1927	1/1:0,9:9:27.09:541,27,0	0/1:18,0:4:3.84:4,0,89	0/0:27,0:5:12.03:0,12,165	0/0:22,0:22:54.18:0,54,879	0/0:29,0:29:84.29:0,84,1367	0/0:25,0:25:63.22:0,63,1022	0/0:29,0:25:71.89:0,72,1104	0/0:18,0:18:48.13:0,48,730	0/0:18,0:18:54.18:0,54,880	0/0:13,0:13:33.10:0,33,513	0/0:15,0:15:42.14:0,42,685	0/0:24,0:24:69.22:0,69,1101	0/0:17,0:17:51.16:0,51,808	1/1:1,17:19:45.15:912,45,0	0/0:20,0:20:57.19:0,57,930	0/0:36,0:36:99:0,108,1735	0/0:31,0:31:81.28:0,81,1320	0/0:15,0:14:36.10:0,36,554	0/0:20,0:19:57.19:0,57,929	0/0:29,0:29:87.28:0,87,1389	0/0:10,0:10:24.08:0,24,391	0/0:9,0:9:24.08:0,24,389	0/0:10,0:10:30.10:0,30,489	0/0:12,0:12:36.12:0,36,587	0/0:21,0:20:60.20:0,60,976	0/0:12,0:12:36.08:0,36,535	0/0:9,0:9:27.08:0,27,416
chr10	47325685	.	C	CT	893.67	PASS	AB=0.832;AC=13;AF=0.232;AN=56;BaseQRankSum=0.125;DP=614;FS=3.850;HRun=14;HaplotypeScore=83.0219;InbreedingCoeff=-0.0741;MQ=73.24;MQ0=1;MQRankSum=-0.137;QD=3.18;ReadPosRankSum=-3.678;VQSLOD=-0.1415;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,1:37:36.47:0,36,325	0/1:7,1:9:10.45:10,0,53	0/1:17,0:14:8.92:9,0,40	0/1:18,0:16:11.30:11,0,14	0/1:25,2:29:3.01:3,0,201	0/0:21,0:23:21.11:0,21,218	0/0:24,0:26:51.14:0,51,316	0/1:16,14:32:18.56:232,0,19	0/0:16,0:16:28.68:0,29,176	0/0:23,0:23:24.72:0,25,157	0/0:14,0:16:9.44:0,9,124	0/0:20,0:20:38.24:0,38,247	0/0:28,0:29:12.83:0,13,194	0/1:9,20:29:18.45:202,0,18	0/1:23,1:25:20.71:21,0,203	0/0:27,0:30:58.77:0,59,352	0/0:25,0:25:39.72:0,40,244	0/0:17,0:17:31.40:0,31,197	0/1:13,5:18:14.04:110,0,14	0/1:12,15:28:28.81:192,0,29	0/1:8,7:16:18.87:40,0,19	0/0:13,0:14:34.37:0,34,207	0/1:22,1:26:15.39:15,0,150	0/0:8,0:8:20.61:0,21,133	0/0:13,0:13:29.44:0,29,190	0/0:17,0:17:29.45:0,29,191	1/1:15,14:29:12.07:201,12,0	0/0:15,0:18:34.42:0,34,212
chr10	47329784	.	A	AC	12295.83	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-15.413;DP=546;FS=3.713;HRun=1;HaplotypeScore=54.0497;InbreedingCoeff=0.9969;MQ=66.67;MQ0=0;MQRankSum=0.191;QD=43.45;ReadPosRankSum=1.215;VQSLOD=5.0134;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:72.23:0,72,990	0/0:12,0:12:30.10:0,30,420	0/0:21,0:19:57.19:0,57,786	0/0:22,0:20:53.07:0,53,648	1/1:0,11:11:33.11:527,33,0	0/0:15,0:15:45.15:0,45,628	0/0:18,0:18:54.18:0,54,755	1/1:0,31:31:90.28:1385,90,0	0/0:20,0:20:57.19:0,57,797	1/1:1,15:15:42.14:671,42,0	1/1:0,11:11:21.07:335,21,0	0/0:19,0:19:57.19:0,57,792	0/0:14,0:14:39.13:0,39,544	1/1:1,23:24:69.23:1081,69,0	0/0:26,0:25:75.25:0,75,1048	0/0:24,0:24:69.23:0,69,964	1/1:0,40:40:99:1811,114,0	1/1:1,19:20:51.17:808,51,0	1/1:0,19:19:57.14:851,57,0	1/1:0,15:15:39.13:623,39,0	1/1:0,39:39:99:1625,102,0	0/0:13,0:13:39.11:0,39,512	0/0:5,0:5:15.05:0,15,209	0/0:30,0:30:90.26:0,90,1235	1/1:0,16:16:45.15:718,45,0	1/1:0,13:13:39.13:616,39,0	1/1:0,19:19:53.88:862,54,0	1/1:0,9:9:24.08:383,24,0
chr10	47330156	.	TAG	T	1119.97	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.079;DP=550;FS=1.574;HRun=0;HaplotypeScore=72.1641;InbreedingCoeff=0.9676;MQ=68.73;MQ0=9;MQRankSum=0.900;QD=32.00;ReadPosRankSum=1.560;VQSLOD=5.5614;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:84.27:0,84,1539	1/1:0,5:4:12.04:177,12,0	0/0:29,0:21:57.06:0,57,964	0/0:41,0:31:74.81:0,75,1237	0/0:15,0:15:36.12:0,36,665	0/0:22,0:22:57.18:0,57,1014	0/0:21,0:21:60.21:0,60,1115	0/0:28,0:28:72.24:0,72,1320	0/0:15,0:15:45.15:0,45,838	0/0:19,0:18:51.17:0,51,955	0/0:18,0:17:45.11:0,45,725	0/0:28,0:28:81.28:0,81,1501	0/0:17,0:17:45.15:0,45,834	0/0:22,0:22:66.20:0,66,1172	1/1:1,29:30:72.11:1060,72,0	0/0:17,0:15:45.15:0,45,825	0/0:13,0:13:36.12:0,36,673	0/0:12,0:12:33.11:0,33,610	0/0:21,0:18:48.16:0,48,873	0/0:14,0:14:39.12:0,39,699	0/0:18,0:18:48.16:0,48,866	0/0:13,0:13:39.13:0,39,707	0/0:12,0:12:30.10:0,30,540	0/0:20,0:20:48.13:0,48,826	0/0:18,0:18:51.17:0,51,946	0/0:11,0:11:33.11:0,33,610	0/0:29,0:29:84.29:0,84,1545	0/0:8,0:8:12.04:0,12,225
chr10	47331600	.	CTTCTCTA	C	488.54	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=4.540;DP=488;FS=0.000;HRun=0;HaplotypeScore=107.6930;InbreedingCoeff=0.9459;MQ=81.66;MQ0=0;MQRankSum=-4.414;QD=27.14;ReadPosRankSum=0.634;VQSLOD=3.3584;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:81.19:0,81,2861	1/1:1,3:4:9.03:224,9,0	0/0:12,0:12:21.06:0,21,722	0/0:18,0:18:39.13:0,39,1254	0/0:18,0:18:42.13:0,42,1521	0/0:33,0:33:96.29:0,96,3497	0/0:12,0:12:27.09:0,27,917	0/0:35,0:35:84.27:0,84,2966	0/0:19,0:19:48.15:0,48,1768	0/0:14,0:14:39.13:0,39,1500	0/0:11,0:11:24.08:0,24,931	0/0:14,0:14:42.14:0,42,1592	0/0:18,0:18:45.15:0,45,1694	0/0:11,0:11:33.10:0,33,1190	1/1:4,10:13:15.05:374,15,0	0/0:23,0:23:63.19:0,63,2269	0/0:26,0:26:69.24:0,69,2683	0/0:16,0:16:45.15:0,45,1741	0/0:38,0:38:99:0,105,3990	0/0:21,0:21:63.20:0,63,2277	0/0:7,0:7:15.05:0,15,585	0/0:8,0:8:24.08:0,24,903	0/0:9,0:8:24.08:0,24,935	0/0:11,0:11:30.10:0,30,1169	0/0:15,0:15:42.13:0,42,1500	0/0:17,0:17:48.16:0,48,1812	0/0:25,0:25:72.25:0,72,2686	0/0:10,0:10:27.07:0,27,869
chr10	47331853	.	C	CAA	5465.25	PASS	AB=0.567;AC=28;AF=0.500;AN=56;BaseQRankSum=-0.907;DP=466;FS=2.213;HRun=10;HaplotypeScore=61.4778;InbreedingCoeff=0.8425;MQ=63.48;MQ0=2;MQRankSum=-0.864;QD=22.49;ReadPosRankSum=3.135;VQSLOD=4.2614;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:60.10:0,60,610	0/0:4,0:4:12.03:0,12,122	0/0:20,0:15:4.91:0,5,187	0/0:14,0:10:11.66:0,12,90	1/1:3,15:19:48.09:666,48,0	0/0:19,0:19:54.12:0,54,549	0/0:16,0:16:45.10:0,45,458	0/0:24,0:25:53.74:0,54,517	0/1:5,1:15:4.54:89,0,5	1/1:8,14:22:42.10:584,42,0	1/1:4,12:16:36.08:498,36,0	0/1:1,0:8:15.03:28,0,15	1/1:3,0:9:12.48:44,12,0	0/0:15,0:15:36.05:0,36,365	0/0:12,0:12:33.08:0,33,336	1/1:2,0:17:34.93:123,35,0	1/1:2,8:11:27.08:386,27,0	1/1:5,13:22:46.59:567,47,0	0/0:19,0:19:41.78:0,42,408	0/0:23,0:23:63.12:0,63,641	0/0:5,0:5:12.02:0,12,122	1/1:1,0:9:19.96:70,20,0	1/1:3,0:17:32.44:114,32,0	1/1:1,0:13:27.43:96,27,0	1/1:0,15:16:44.64:635,45,0	1/1:3,22:27:71.15:938,71,0	0/0:25,0:24:64.74:0,65,692	1/1:4,16:20:42.14:627,42,0
chr10	47331971	.	GAA	G	1492.17	PASS	AB=0.889;AC=19;AF=0.339;AN=56;BaseQRankSum=-4.662;DP=452;FS=1.740;HRun=14;HaplotypeScore=79.2944;InbreedingCoeff=0.6408;MQ=54.84;MQ0=16;MQRankSum=1.415;QD=9.10;ReadPosRankSum=4.449;VQSLOD=1.7809;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:30:53.09:0,53,618	0/1:5,0:5:7.95:8,0,55	0/0:15,0:2:5.10:0,5,22	0/0:38,0:11:14.43:0,14,89	1/1:8,7:15:14.81:139,15,0	0/0:13,0:13:27.09:0,27,371	0/0:19,0:21:32.08:0,32,379	0/0:9,1:23:8.32:0,8,127	0/0:14,0:14:2.57:0,3,123	1/1:6,13:18:29.91:276,30,0	1/1:5,13:18:17.82:164,18,0	0/0:11,0:9:23.04:0,23,196	0/0:7,0:7:19.69:0,20,153	0/0:3,0:7:4.99:0,5,17	0/0:12,0:13:17.92:0,18,207	0/0:18,0:16:32.76:0,33,316	1/1:6,15:19:5.09:160,5,0	1/1:2,12:14:3.30:174,3,0	0/1:12,3:22:46.41:46,0,91	0/0:10,1:19:30.46:0,30,227	0/0:6,0:12:20.44:0,20,82	0/0:10,0:10:13.18:0,13,147	0/0:12,0:12:7.29:0,7,82	0/1:8,0:7:4.92:5,0,67	1/1:2,8:10:11.87:158,12,0	1/1:4,11:19:26.64:332,27,0	0/0:13,0:20:22.45:0,22,175	1/1:2,7:8:24.03:221,24,0
chr10	47331981	.	A	AAC	2071.46	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=1.161;DP=508;FS=17.701;HRun=0;HaplotypeScore=102.2573;InbreedingCoeff=0.9248;MQ=56.33;MQ0=20;MQRankSum=-2.514;QD=22.52;ReadPosRankSum=0.453;VQSLOD=3.1121;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:68.98:0,69,693	0/0:6,0:6:16.75:0,17,133	0/0:24,0:2:4.40:0,4,18	0/0:47,0:14:0.46:0,0,78	0/0:19,0:19:38.89:0,39,315	0/0:13,0:12:33.03:0,33,383	0/0:21,0:21:41.88:0,42,450	0/0:23,0:23:65.81:0,66,533	1/1:10,6:17:31.64:343,32,0	0/0:23,0:23:58.08:0,58,470	0/0:20,0:20:35.76:0,36,267	1/1:4,7:9:26.43:353,26,0	1/1:5,4:9:19.62:230,20,0	0/0:7,0:7:14.97:0,15,124	0/0:16,0:16:29.63:0,30,230	1/1:13,7:18:47:434,47,0	0/0:25,0:23:30.79:0,31,267	0/0:19,0:19:41.80:0,42,323	0/0:25,0:20:55.11:0,55,450	0/0:20,0:19:47.81:0,48,415	0/0:14,0:13:32.97:0,33,275	1/1:5,5:11:32.10:349,32,0	1/1:8,4:11:26.88:279,27,0	1/1:7,3:10:26.85:279,27,0	0/0:11,0:10:23.92:0,24,190	0/0:28,0:27:74.72:0,75,590	0/0:15,0:15:29.78:0,30,253	0/0:11,0:10:25.17:0,25,190
chr10	47331984	.	AAC	A	920.45	PASS	AB=0.982;AC=22;AF=0.393;AN=56;BaseQRankSum=2.928;DP=511;FS=30.534;HRun=0;HaplotypeScore=102.9295;InbreedingCoeff=0.0918;MQ=56.61;MQ0=18;MQRankSum=1.240;QD=2.88;ReadPosRankSum=2.762;VQSLOD=0.5465;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:55.12:0,55,628	0/1:6,0:6:0.50:91,0,0	0/0:24,0:2:4.04:0,4,12	0/1:47,0:14:7.54:8,0,68	0/1:18,0:18:3.59:4,0,140	0/0:13,0:12:33.06:0,33,423	0/0:21,0:21:44.67:0,45,490	0/0:23,0:23:29.03:0,29,264	1/1:17,0:16:20.81:188,21,0	0/1:23,0:23:6.91:7,0,195	0/1:19,1:20:44.96:45,0,73	0/1:11,0:9:0.47:37,0,0	1/1:10,0:10:8.81:68,9,0	0/0:8,0:8:17.56:0,18,121	0/1:14,2:16:34.48:79,0,34	0/1:20,0:18:10.25:95,0,10	0/1:25,0:23:29.73:30,0,72	0/1:22,0:22:25.44:25,0,96	0/0:25,0:20:37.47:0,37,263	0/0:19,0:18:40.22:0,40,360	0/0:13,0:12:24.91:0,25,185	1/1:11,0:11:19.48:104,19,0	0/1:12,0:11:1.25:37,0,1	1/1:13,0:12:19.60:170,20,0	0/1:12,0:11:16.24:16,0,37	0/1:27,0:27:41.11:41,0,210	0/0:17,0:17:30.66:0,31,323	0/1:9,1:10:18.84:49,0,19
chr10	47332001	.	CA	C	2137.34	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=-0.194;DP=530;FS=9.210;HRun=12;HaplotypeScore=102.7864;InbreedingCoeff=0.8676;MQ=59.54;MQ0=14;MQRankSum=-2.874;QD=10.85;ReadPosRankSum=1.393;VQSLOD=2.5284;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:25:40.15:0,40,373	0/0:4,0:4:11.13:0,11,55	0/1:23,0:5:2.48:2,0,36	0/0:38,0:11:4.77:0,5,49	0/0:25,0:25:57.07:0,57,562	1/1:3,12:14:26.87:209,27,0	1/1:5,15:20:32.86:255,33,0	0/0:33,0:33:74.35:0,74,419	1/1:7,10:16:8.25:238,8,0	0/0:28,0:28:42.08:0,42,426	0/0:17,0:17:21.04:0,21,213	1/1:7,9:14:4.18:143,4,0	1/1:4,6:10:14.91:116,15,0	0/0:7,0:7:14.29:0,14,77	0/0:18,0:18:29.75:0,30,132	1/1:5,17:21:52.82:401,53,0	0/0:24,1:23:21.75:0,22,378	0/0:18,1:20:13.84:0,14,278	0/0:24,0:19:31.56:0,32,172	0/0:16,0:15:29.08:0,29,180	0/0:15,0:14:37.59:0,38,225	1/1:6,4:10:11.89:93,12,0	1/1:2,4:6:11.95:93,12,0	1/1:2,13:14:29.87:232,30,0	0/0:15,1:16:36:0,36,336	1/1:6,22:30:66.77:499,67,0	0/0:20,0:20:37.15:0,37,211	1/1:7,3:11:7.15:69,7,0
chr10	47332004	.	A	AC	563.38	PASS	AB=0.848;AC=7;AF=0.125;AN=56;BaseQRankSum=-2.259;DP=514;FS=0.000;HRun=0;HaplotypeScore=108.4077;InbreedingCoeff=0.3634;MQ=62.32;MQ0=12;MQRankSum=-1.887;QD=6.26;ReadPosRankSum=-1.960;VQSLOD=3.1281;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:52.72:0,53,627	0/1:1,5:6:5:117,0,5	0/0:25,0:8:14.11:0,14,118	0/0:38,0:11:1.62:0,2,142	0/0:24,0:24:66.14:0,66,833	0/0:15,0:14:32.84:0,33,247	0/0:18,0:18:35.81:0,36,265	0/1:32,0:32:52.04:72,0,52	0/0:17,0:16:47.76:0,48,382	0/0:27,0:27:72.14:0,72,852	0/0:16,0:16:41.90:0,42,447	0/0:16,0:14:41.27:0,41,300	0/0:10,0:10:23.89:0,24,186	0/0:6,0:6:6.23:0,6,16	1/1:4,13:17:27.17:384,27,0	0/0:22,0:20:59.68:0,60,445	0/0:23,0:22:54.05:0,54,655	0/0:20,0:20:53.22:0,53,577	1/1:21,0:17:1.46:76,1,0	0/1:14,0:13:29.38:44,0,29	0/0:15,0:14:5.20:0,5,48	0/0:9,0:9:26.88:0,27,209	0/0:6,0:6:11.93:0,12,87	0/0:16,0:15:35.86:0,36,274	0/0:16,0:16:44.99:0,45,488	0/0:32,0:32:89.58:0,90,683	0/0:18,0:18:3.85:0,4,35	0/0:11,0:11:32.93:0,33,280
chr10	47333759	.	T	TA	960.72	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.762;DP=629;FS=9.550;HRun=8;HaplotypeScore=64.2863;InbreedingCoeff=0.9884;MQ=74.88;MQ0=0;MQRankSum=-0.729;QD=28.26;ReadPosRankSum=1.265;VQSLOD=3.9397;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,102,921	1/1:0,6:6:18.05:208,18,0	0/0:11,0:10:17.97:0,18,161	0/0:14,0:14:29.76:0,30,246	0/0:32,0:32:84.03:0,84,764	0/0:30,0:30:78.01:0,78,708	0/0:21,0:21:60.01:0,60,542	0/0:24,0:24:59.99:0,60,538	0/0:23,1:24:28.41:0,28,511	0/0:25,0:25:72.03:0,72,659	0/0:31,0:31:78.02:0,78,714	0/0:20,0:20:51:0,51,462	0/0:22,0:22:63.03:0,63,577	0/0:13,0:13:30.01:0,30,275	1/1:1,27:28:53.78:873,54,0	0/0:25,0:25:57.01:0,57,522	0/0:22,1:23:25.41:0,25,487	0/0:16,0:16:23.99:0,24,220	0/0:19,0:19:51:0,51,461	0/0:39,0:39:99:0,108,989	0/0:21,0:22:62.06:0,62,551	0/0:28,0:28:78.04:0,78,714	0/0:15,0:15:41.96:0,42,374	0/0:20,0:20:57.01:0,57,515	0/0:13,0:13:29.99:0,30,268	0/0:35,0:35:96.03:0,96,875	0/0:23,0:23:66.03:0,66,603	0/0:12,0:12:33.01:0,33,302
chr10	47334001	.	TGCCAAGAACTAACAAC	T	2220.30	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.887;DP=652;FS=0.952;HRun=0;HaplotypeScore=296.7859;InbreedingCoeff=0.9963;MQ=77.04;MQ0=3;MQRankSum=-6.512;QD=79.30;ReadPosRankSum=2.992;VQSLOD=2.4994;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,108,6735	1/1:0,8:8:21.07:1025,21,0	0/0:24,0:21:63.22:0,63,2733	0/0:30,0:25:68.98:0,69,2278	0/0:28,0:28:84.29:0,84,3781	0/0:30,0:30:90.31:0,90,5863	0/0:20,0:20:60.21:0,60,3901	0/0:24,0:24:72.23:0,72,3321	0/0:21,0:21:60.21:0,60,2712	0/0:14,0:14:39.13:0,39,1845	0/0:23,0:23:69.24:0,69,3089	0/0:18,0:18:44.41:0,44,2500	0/0:25,0:25:72.25:0,72,3906	0/0:18,0:18:54.19:0,54,3547	1/1:0,20:20:27.09:1315,27,0	0/0:31,0:31:84.29:0,84,4275	0/0:32,0:32:90.31:0,90,4155	0/0:18,0:18:48.16:0,48,2325	0/0:17,0:17:51.18:0,51,2901	0/0:25,0:25:72.23:0,72,4302	0/0:30,0:30:90.29:0,90,5725	0/0:18,0:18:48.16:0,48,2310	0/0:18,0:18:48.15:0,48,2051	0/0:24,0:24:63.21:0,63,2658	0/0:27,0:27:75.26:0,75,3128	0/0:38,0:37:99:0,114,5537	0/0:23,0:23:69.24:0,69,4611	0/0:10,0:10:24.08:0,24,1125
chr10	47334011	.	TAAC	T	4551.31	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=5.720;DP=692;FS=0.402;HRun=0;HaplotypeScore=130.6882;InbreedingCoeff=0.9501;MQ=66.86;MQ0=6;MQRankSum=4.573;QD=21.47;ReadPosRankSum=4.604;VQSLOD=4.8476;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:72.23:0,72,1376	1/1:8,0:8:20.83:146,21,0	0/0:25,0:16:12.03:0,12,203	0/0:33,0:26:27.08:0,27,415	1/1:7,16:23:36.12:489,36,0	0/0:28,0:28:60.18:0,60,1121	0/0:26,0:26:39.44:0,39,1086	0/0:21,0:31:45.12:0,45,588	0/0:11,0:20:20.93:0,21,234	1/1:4,13:17:33.10:432,33,0	1/1:6,16:22:42.14:570,42,0	0/0:9,0:23:20.89:0,21,268	0/0:11,0:28:39.06:0,39,487	0/0:18,0:18:42.14:0,42,823	1/1:20,0:20:26.75:185,27,0	0/0:11,0:35:51.03:0,51,625	1/1:8,22:30:57.19:775,57,0	1/1:11,10:21:10.53:327,11,0	0/0:19,0:19:36.12:0,36,683	0/0:23,0:23:48.16:0,48,923	0/0:31,0:31:57.20:0,57,1085	0/0:11,0:23:26.68:0,27,264	0/0:6,0:25:34.97:0,35,314	0/0:17,0:27:14.88:0,15,168	1/1:12,14:26:2.25:338,2,0	1/1:8,28:35:84.27:1126,84,0	0/0:22,0:22:48.16:0,48,927	1/1:3,6:9:12.04:163,12,0
chr10	47335597	.	C	CCACA	1276.72	PASS	AB=1.000;AC=16;AF=0.308;AN=52;BaseQRankSum=0.250;DP=459;FS=12.262;HRun=0;HaplotypeScore=96.2313;InbreedingCoeff=0.5336;MQ=64.11;MQ0=14;MQRankSum=0.697;QD=7.38;ReadPosRankSum=-3.074;VQSLOD=-0.0773;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:17:18.06:0,18,248	0/0:4,0:4:0.47:0,0,1	./.	0/1:28,0:15:0:0,0,0	0/0:20,0:20:1.28:0,1,42	1/1:11,3:16:3.01:71,3,0	1/1:18,0:18:7.10:87,7,0	./.	0/0:8,0:8:11.92:0,12,115	0/0:14,0:13:10.20:0,10,137	0/0:12,0:12:15.02:0,15,202	0/0:19,0:19:39.10:0,39,461	0/0:14,0:14:18.03:0,18,219	1/1:12,0:12:9.29:132,9,0	0/1:12,0:12:72.62:107,0,73	0/0:7,0:7:12.03:0,12,138	0/0:15,0:15:14.56:0,15,168	0/1:17,0:17:15.94:16,0,49	0/1:17,0:17:22.47:176,0,22	1/1:19,0:19:15.05:233,15,0	1/1:12,0:10:10.59:139,11,0	0/0:18,0:18:11.97:0,12,128	0/0:14,0:14:11.87:0,12,147	0/0:17,0:16:12.02:0,12,125	0/0:12,0:12:12.01:0,12,151	0/0:27,0:26:21.78:0,22,357	1/1:22,0:22:33.09:482,33,0	0/0:16,0:13:15.05:0,15,200
chr10	47335638	.	C	CAGAGAGAG	2504.20	PASS	AB=1.000;AC=20;AF=0.357;AN=56;BaseQRankSum=-3.268;DP=480;FS=0.763;HRun=0;HaplotypeScore=149.9140;InbreedingCoeff=0.6794;MQ=47.25;MQ0=20;MQRankSum=-0.676;QD=13.76;ReadPosRankSum=0.050;VQSLOD=2.8804;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:21:15.03:0,15,306	0/1:6,0:6:14.88:15,0,100	0/0:6,0:4:2.59:0,3,78	0/0:10,0:3:1.75:0,2,27	1/1:18,0:17:14.93:357,15,0	0/1:17,0:17:2.65:3,0,383	0/0:24,0:24:33.11:0,33,759	0/0:14,0:14:12.51:0,13,226	0/0:13,0:13:18.06:0,18,351	1/1:16,0:15:18.53:524,19,0	1/1:14,0:12:3.46:92,3,0	0/0:27,0:27:23.71:0,24,429	0/0:18,0:17:17.19:0,17,337	0/0:19,0:19:30.10:0,30,618	1/1:19,0:20:21.51:296,22,0	0/0:9,0:10:11.67:0,12,206	1/1:14,0:14:9.50:212,10,0	1/1:15,0:14:8.95:143,9,0	0/0:17,0:17:15.05:0,15,300	0/0:18,0:17:21.07:0,21,401	0/0:19,0:16:15.05:0,15,287	0/0:22,0:22:27.09:0,27,523	0/0:15,0:14:12.04:0,12,230	0/0:19,0:17:13.81:0,14,250	1/1:17,0:16:14.90:284,15,0	1/1:29,0:27:25.32:654,25,0	0/0:22,0:22:0.46:0,0,295	1/1:9,2:13:3.01:115,3,0
chr10	47335720	.	CA	C	3767.74	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=10.020;DP=530;FS=8.904;HRun=9;HaplotypeScore=66.9037;InbreedingCoeff=0.9957;MQ=72.68;MQ0=0;MQRankSum=1.170;QD=23.85;ReadPosRankSum=2.528;VQSLOD=4.4147;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:57.17:0,57,658	1/1:0,7:7:21.01:192,21,0	0/0:12,0:12:20.85:0,21,227	0/0:13,0:11:19.56:0,20,186	0/0:22,0:22:57.16:0,57,648	0/0:13,0:13:36.11:0,36,415	0/0:21,0:23:59.84:0,60,652	0/0:20,0:21:59.96:0,60,649	1/1:1,9:10:24.01:220,24,0	0/0:29,0:29:66.20:0,66,762	0/0:16,0:16:45.10:0,45,493	1/1:3,24:27:72.03:659,72,0	1/1:0,16:16:42.02:384,42,0	0/0:24,0:24:60.16:0,60,678	1/1:1,24:26:68.07:610,68,0	1/1:1,17:18:51.03:467,51,0	0/0:23,0:23:69.17:0,69,775	0/0:18,0:18:54.14:0,54,612	0/0:17,1:17:17.65:0,18,448	0/0:18,0:18:45.13:0,45,519	0/0:10,0:10:27.08:0,27,312	1/1:1,11:12:30.01:275,30,0	1/1:2,21:23:60.03:549,60,0	1/1:2,17:18:45.02:412,45,0	0/0:18,0:18:54.15:0,54,615	0/0:30,0:29:75.20:0,75,847	0/0:27,0:27:78.23:0,78,898	0/0:13,0:13:27.08:0,27,312
chr10	47336568	.	G	GA	1786.07	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=10.242;DP=772;FS=1.861;HRun=3;HaplotypeScore=74.4636;InbreedingCoeff=0.9989;MQ=63.87;MQ0=0;MQRankSum=-0.211;QD=33.70;ReadPosRankSum=1.456;VQSLOD=4.2995;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,132,1570	1/1:0,9:9:24.04:314,24,0	0/0:33,0:29:66.20:0,66,854	0/0:23,0:23:66.05:0,66,749	0/0:30,0:30:84.24:0,84,995	0/0:26,0:26:72.20:0,72,852	0/0:20,0:20:57.16:0,57,670	0/0:29,0:29:72.20:0,72,842	0/0:38,0:38:99:0,108,1271	0/0:34,0:34:99:0,99,1179	0/0:23,0:23:63.18:0,63,745	0/0:32,0:32:93.28:0,93,1115	0/0:17,0:17:48.13:0,48,564	0/0:18,0:18:51.13:0,51,590	1/1:3,41:44:99:1593,114,0	0/0:22,0:22:63.17:0,63,732	0/0:38,0:38:99:0,108,1283	0/0:16,0:16:45.08:0,45,511	0/0:24,0:24:63.18:0,63,744	0/0:19,0:19:51.14:0,51,600	0/0:35,0:35:99:0,102,1197	0/0:33,0:33:90.25:0,90,1051	0/0:23,0:23:69.16:0,69,791	0/0:30,0:30:81.20:0,81,955	0/0:19,0:19:54.17:0,54,647	0/0:28,0:28:84.26:0,84,1008	0/0:37,0:37:99:0,105,1260	0/0:27,0:27:70.96:0,71,812
chr10	47337229	.	A	AT	6014.14	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-14.233;DP=560;FS=3.131;HRun=10;HaplotypeScore=82.2649;InbreedingCoeff=0.9395;MQ=69.91;MQ0=0;MQRankSum=2.817;QD=21.48;ReadPosRankSum=-0.364;VQSLOD=5.4790;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:89.85:0,90,735	0/0:1,0:6:10.18:0,10,30	0/0:7,0:6:7.96:0,8,49	0/0:13,0:11:3.07:0,3,42	1/1:2,21:23:59.98:618,60,0	0/0:21,0:21:50.91:0,51,416	0/0:17,0:17:47.89:0,48,386	0/0:25,0:25:53.88:0,54,443	0/0:0,0:21:34.15:0,34,100	1/1:7,18:25:55.02:577,55,0	1/1:3,19:22:17.38:365,17,0	0/0:3,0:19:28.03:0,28,81	0/0:3,0:18:24.44:0,24,71	1/1:0,17:17:45.07:467,45,0	0/0:2,0:19:24.44:0,24,72	0/0:2,0:19:22.40:0,22,66	1/1:1,31:33:72.01:750,72,0	1/1:6,25:33:68.63:693,69,0	1/1:5,21:26:63.08:655,63,0	1/1:3,15:18:42.10:445,42,0	1/1:3,10:14:28.43:291,28,0	0/0:2,0:20:30.21:0,30,88	0/0:1,0:13:20.28:0,20,60	0/0:0,0:23:38.80:0,39,113	1/1:6,15:21:5.43:263,5,0	1/1:8,14:22:41.15:446,41,0	1/1:5,9:14:18.82:220,19,0	1/1:3,9:12:21.05:224,21,0
chr10	47337604	.	G	GA	4376.83	PASS	AB=0.786;AC=20;AF=0.357;AN=56;BaseQRankSum=-8.623;DP=668;FS=1.529;HRun=10;HaplotypeScore=87.8419;InbreedingCoeff=0.8079;MQ=64.26;MQ0=0;MQRankSum=-0.185;QD=17.37;ReadPosRankSum=-1.243;VQSLOD=4.9007;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,1:31:36.46:0,36,495	1/1:2,0:4:5.68:28,6,0	0/1:17,0:14:5.97:6,0,78	0/0:26,0:22:8.06:0,8,152	1/1:8,27:36:71.44:712,71,0	0/0:22,0:22:25.23:0,25,322	0/0:19,0:19:47.93:0,48,394	0/0:39,0:39:89.85:0,90,737	0/0:4,0:28:36.15:0,36,140	1/1:11,26:37:53.52:750,54,0	1/1:4,21:26:59.89:587,60,0	0/0:3,0:20:35.58:0,36,119	0/0:2,0:31:55:0,55,159	0/0:24,0:24:59.91:0,60,492	1/1:3,0:28:53.72:265,54,0	0/0:2,0:26:38.70:0,39,112	1/1:2,19:22:26.32:470,26,0	0/1:8,11:20:37.02:290,0,37	0/0:27,2:29:37.12:0,37,505	0/0:22,0:23:30.98:0,31,400	0/0:5,0:5:11.99:0,12,99	0/0:5,0:22:30.55:0,31,88	0/0:4,0:24:35.28:0,35,115	0/0:1,0:16:28.52:0,29,82	1/1:2,20:22:39.10:416,39,0	1/1:7,20:28:41.32:608,41,0	0/0:28,1:30:32.92:0,33,463	1/1:3,8:11:5.26:245,5,0
chr10	47339840	.	CCCCA	C	5763.27	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=7.353;DP=564;FS=0.395;HRun=0;HaplotypeScore=101.8865;InbreedingCoeff=0.9983;MQ=72.23;MQ0=1;MQRankSum=-4.487;QD=41.46;ReadPosRankSum=3.809;VQSLOD=5.2545;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:81.26:0,81,1974	0/0:12,0:12:33.10:0,33,765	0/0:19,0:19:41.99:0,42,751	0/0:11,0:9:20.85:0,21,277	0/0:24,0:24:57.16:0,57,1372	0/0:22,0:22:66.18:0,66,1481	0/0:28,0:28:78.70:0,79,1706	0/0:18,0:19:35.67:0,36,573	1/1:3,17:20:54.18:914,54,0	0/0:20,0:20:51.14:0,51,1088	0/0:19,0:19:57.20:0,57,1365	1/1:3,16:19:42.14:730,42,0	1/1:1,10:11:30.10:521,30,0	0/0:23,0:23:33.06:0,33,489	0/0:23,0:23:60.19:0,60,1459	1/1:0,33:32:72.01:1252,72,0	0/0:27,0:27:75.23:0,75,1772	0/0:19,0:19:57.19:0,57,1392	0/0:16,0:16:39.12:0,39,662	0/0:15,0:15:24.01:0,24,356	0/0:29,0:29:60.14:0,60,1037	1/1:1,22:23:66.23:1148,66,0	1/1:3,13:16:33.11:572,33,0	1/1:3,14:17:36.12:626,36,0	0/0:22,0:22:51.18:0,51,1232	0/0:17,0:17:42.13:0,42,974	0/0:20,0:20:41.93:0,42,685	0/0:9,0:9:27.08:0,27,628
chr10	47341026	.	AG	A	2755.36	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=9.475;DP=530;FS=18.599;HRun=8;HaplotypeScore=55.9507;InbreedingCoeff=0.9877;MQ=67.79;MQ0=3;MQRankSum=-2.728;QD=22.58;ReadPosRankSum=3.905;VQSLOD=2.2872;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:78.24:0,78,941	0/0:4,0:4:12.02:0,12,134	0/0:20,0:18:41.75:0,42,454	0/0:22,1:14:14.52:0,15,327	0/0:13,0:13:33.10:0,33,398	0/0:14,0:14:39.12:0,39,471	0/0:27,0:27:63.19:0,63,759	0/0:15,0:15:36.09:0,36,412	1/1:1,11:12:27.04:260,27,0	0/0:20,0:20:51.16:0,51,615	0/0:15,0:15:42.13:0,42,507	1/1:2,20:22:51.08:492,51,0	1/1:0,21:21:63.10:608,63,0	0/0:18,1:19:28.20:0,28,620	0/0:23,0:23:66.19:0,66,787	1/1:1,16:17:42.07:406,42,0	0/0:36,0:36:99:0,99,1183	0/0:23,0:23:60.18:0,60,724	0/0:17,0:17:48.15:0,48,579	0/0:12,0:12:32.24:0,32,385	0/0:36,0:36:90.24:0,90,1056	1/1:2,15:17:39.06:376,39,0	1/1:1,15:16:36.06:348,36,0	1/1:0,17:17:48.08:464,48,0	0/0:18,0:18:48.13:0,48,565	0/0:25,0:25:57.15:0,57,667	0/0:13,0:13:33.10:0,33,398	0/0:5,0:5:15.05:0,15,181
chr10	47341660	.	A	AT	2803.27	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-11.509;DP=582;FS=12.741;HRun=9;HaplotypeScore=57.7796;InbreedingCoeff=0.9371;MQ=76.13;MQ0=0;MQRankSum=0.343;QD=22.25;ReadPosRankSum=1.942;VQSLOD=3.6685;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,108,938	1/1:3,7:11:4.97:212,5,0	0/0:12,0:12:29.99:0,30,260	0/0:18,0:18:20.89:0,21,203	0/0:28,0:28:71.97:0,72,625	0/0:21,0:21:59.98:0,60,521	0/0:21,0:21:56.98:0,57,495	0/0:31,0:32:77.01:0,77,655	1/1:1,12:13:33.09:365,33,0	0/0:30,0:30:83.96:0,84,727	0/0:20,0:20:53.95:0,54,461	1/1:2,10:12:24.06:266,24,0	1/1:2,11:13:27.07:299,27,0	0/0:16,0:16:38.99:0,39,339	1/1:3,12:15:33.09:365,33,0	1/1:4,18:22:28.09:538,28,0	0/0:27,2:29:5.57:0,6,501	0/0:28,1:29:44.75:0,45,608	0/0:19,0:19:44.98:0,45,391	0/0:26,0:26:65.97:0,66,569	0/0:23,0:23:68.99:0,69,599	1/1:2,9:11:4.03:273,4,0	1/1:4,12:16:30.08:332,30,0	1/1:2,10:13:35.76:360,36,0	0/0:25,0:25:65.94:0,66,568	0/0:27,0:27:65.98:0,66,573	0/0:25,0:24:62.91:0,63,535	0/0:12,0:12:35.95:0,36,301
chr10	47342040	.	ACTCCTCCTCCTCCTCCTCCTCCTCCTC	A	5657.64	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=7.544;DP=321;FS=2.679;HRun=0;HaplotypeScore=181.7199;InbreedingCoeff=0.7306;MQ=66.85;MQ0=4;MQRankSum=-5.942;QD=51.90;ReadPosRankSum=6.279;VQSLOD=3.7362;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:14:24.89:0,25,537	0/0:3,0:3:2.97:0,3,20	0/0:14,0:9:8.99:0,9,79	0/0:14,0:10:11.94:0,12,143	0/0:9,0:9:3.01:0,3,212	0/0:10,0:9:14.99:0,15,173	0/0:20,0:19:23.95:0,24,586	0/0:15,0:15:29.92:0,30,305	1/1:2,11:13:12.04:843,12,0	0/0:8,0:8:20.60:0,21,453	0/0:2,0:2:3:0,3,25	1/1:2,9:11:18.06:1202,18,0	1/1:4,17:21:21.07:1473,21,0	0/0:4,0:4:11.94:0,12,112	0/0:13,0:12:20.03:0,20,166	1/1:4,20:24:14.87:1056,15,0	0/0:15,0:15:20.92:0,21,347	0/0:6,0:6:11.99:0,12,118	0/0:9,0:9:12.02:0,12,188	0/0:8,0:8:8.98:0,9,369	0/0:16,0:15:21.41:0,21,170	1/1:1,7:8:6.02:422,6,0	1/1:8,0:8:5.94:43,6,0	1/1:2,15:17:9.03:611,9,0	0/0:11,0:11:18:0,18,428	0/0:9,0:9:20.98:0,21,296	0/1:7,0:6:7.99:8,0,79	0/0:10,0:10:21.01:0,21,244
chr10	47342136	.	CACATGACAGGCAAGT	C	5170.39	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=10.000;DP=374;FS=8.885;HRun=0;HaplotypeScore=158.6422;InbreedingCoeff=0.9341;MQ=98.22;MQ0=0;MQRankSum=-8.738;QD=110.01;ReadPosRankSum=3.091;VQSLOD=4.3376;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:57.20:0,57,4064	0/0:6,0:6:18.06:0,18,1235	0/0:27,0:27:78.27:0,78,4869	0/0:16,0:16:39.13:0,39,2622	1/1:0,5:5:15.05:675,15,0	0/0:6,0:6:18.06:0,18,1351	0/0:23,0:23:63.22:0,63,3804	0/0:29,0:29:78.26:0,78,4714	0/0:16,0:16:45.15:0,45,3241	1/1:1,5:6:15.05:597,15,0	1/1:0,3:3:9.03:405,9,0	0/0:13,0:13:30.10:0,30,2250	0/0:19,0:19:54.66:0,55,3688	0/0:5,0:5:15.05:0,15,1114	0/0:11,0:11:33.11:0,33,2462	0/0:27,0:27:63.22:0,63,4204	1/1:2,13:15:33.11:1453,33,0	1/1:0,2:2:6.02:270,6,0	0/0:20,0:20:57.20:0,57,3641	0/0:13,0:13:33.11:0,33,2397	0/0:27,0:27:78.26:0,78,5118	0/0:10,0:10:27.09:0,27,1935	0/0:8,0:8:21.07:0,21,1407	0/0:25,0:25:66.23:0,66,4581	1/1:1,2:3:6.02:270,6,0	1/1:1,8:9:24.08:961,24,0	0/0:5,0:5:15.05:0,15,973	1/1:0,4:4:12.04:540,12,0
chr10	47342362	.	T	TACAC	3217.88	PASS	AB=1.000;AC=44;AF=0.917;AN=48;BaseQRankSum=-2.263;DP=525;FS=0.000;HRun=0;HaplotypeScore=139.7653;InbreedingCoeff=0.2414;MQ=59.66;MQ0=10;MQRankSum=1.295;QD=7.61;ReadPosRankSum=2.169;VQSLOD=2.6090;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:25,1:26:21.03:362,21,0	1/1:7,0:10:6.02:123,6,0	./.	./.	0/1:15,0:13:0.04:0,0,0	1/1:18,0:18:18.03:274,18,0	1/1:29,0:28:11.27:148,11,0	1/1:22,0:22:15.43:166,15,0	1/1:22,0:21:12.04:208,12,0	1/1:11,0:11:9.03:119,9,0	./.	1/1:17,0:17:3.01:69,3,0	1/1:27,0:27:18.50:258,19,0	1/1:14,0:19:3.01:52,3,0	1/1:8,5:15:9.03:190,9,0	1/1:19,0:18:5.01:95,5,0	1/1:15,0:15:15.05:209,15,0	1/1:21,0:20:21.92:293,22,0	1/1:16,0:14:4.83:73,5,0	./.	1/1:31,0:31:9.02:150,9,0	1/1:17,0:17:2.99:24,3,0	0/0:13,0:13:0:0,0,0	1/1:23,0:22:14.86:235,15,0	0/1:16,0:16:0:0,0,0	1/1:19,0:18:9.88:102,10,0	1/1:9,0:10:6.02:93,6,0	1/1:2,0:3:3.01:52,3,0
chr10	47342549	.	A	AT	1366.53	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-7.597;DP=676;FS=8.728;HRun=5;HaplotypeScore=67.7066;InbreedingCoeff=0.9996;MQ=91.30;MQ0=0;MQRankSum=-1.761;QD=27.89;ReadPosRankSum=0.653;VQSLOD=3.6294;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,132,1419	1/1:0,14:14:39.13:513,39,0	0/0:27,0:27:65.47:0,65,667	0/0:32,0:32:68.23:0,68,714	0/0:19,0:19:45.11:0,45,484	0/0:22,0:22:63.16:0,63,676	0/0:20,0:20:51.09:0,51,535	0/0:20,0:19:48.11:0,48,516	0/0:26,0:26:60.13:0,60,637	0/0:22,0:22:66.13:0,66,697	0/0:12,0:12:36.07:0,36,377	0/0:31,0:31:81.18:0,81,861	0/0:20,0:20:54.08:0,54,558	0/0:25,0:25:66.17:0,66,709	1/1:3,32:35:75.24:975,75,0	0/0:22,0:22:60.15:0,60,645	0/0:32,0:32:93.19:0,93,981	0/0:25,0:25:75.16:0,75,796	0/0:23,0:23:60.13:0,60,631	0/0:17,0:17:42.09:0,42,443	0/0:34,0:34:96.22:0,96,1023	0/0:21,0:21:60.15:0,60,644	0/0:26,0:26:78.17:0,78,817	0/0:23,0:23:63.12:0,63,665	0/0:28,0:28:81.20:0,81,871	0/0:25,0:24:63.15:0,63,677	0/0:17,0:16:48.12:0,48,514	0/0:10,0:10:30.08:0,30,322
chr10	47344781	.	TGCAGCCACCGGCAGGAA	T	3074.32	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.775;DP=705;FS=1.756;HRun=0;HaplotypeScore=325.8515;InbreedingCoeff=0.9645;MQ=73.07;MQ0=0;MQRankSum=-7.934;QD=90.42;ReadPosRankSum=3.381;VQSLOD=2.7711;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,105,7252	1/1:3,2:5:9.03:399,9,0	0/0:14,0:14:33.08:0,33,1336	0/0:16,0:16:42.10:0,42,2011	0/0:19,0:19:54.19:0,54,3950	0/0:21,0:21:60.21:0,60,4528	0/0:37,0:37:99:0,105,7640	0/0:32,0:32:87.29:0,87,5605	0/0:32,0:32:96.31:0,96,7055	0/0:29,0:29:81.28:0,81,5131	0/0:12,0:12:30.57:0,31,1787	0/0:33,0:33:99:0,99,7631	0/0:33,0:33:96.31:0,96,7356	0/0:29,0:29:84.29:0,84,6201	1/1:7,22:29:57.20:2789,57,0	0/0:25,0:25:69.24:0,69,4942	0/0:30,0:30:90.26:0,90,6683	0/0:30,0:30:87.30:0,87,6724	0/0:11,0:11:30.10:0,30,1798	0/0:13,0:13:39.13:0,39,2835	0/0:57,0:57:99:0,163,11741	0/0:17,0:17:51.17:0,51,3471	0/0:17,0:17:45.15:0,45,2912	0/0:51,0:51:99:0,151,11734	0/0:23,0:23:66.23:0,66,4505	0/0:25,0:25:75.26:0,75,5417	0/0:23,0:23:66.23:0,66,4744	0/0:6,0:6:18.06:0,18,1460
chr10	47345077	.	GCA	G	563.29	PASS	AB=0.955;AC=9;AF=0.161;AN=56;BaseQRankSum=9.477;DP=531;FS=40.332;HRun=0;HaplotypeScore=84.9528;InbreedingCoeff=0.5186;MQ=74.26;MQ0=3;MQRankSum=-2.281;QD=3.83;ReadPosRankSum=6.286;VQSLOD=-0.2607;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,1:29:73.51:0,74,852	0/0:12,0:12:23.37:0,23,290	0/1:17,0:17:0.84:1,0,320	0/0:13,0:11:4.11:0,4,266	0/0:11,0:11:29.25:0,29,186	0/0:15,0:15:17.31:0,17,211	0/0:52,0:52:88.04:0,88,1108	0/0:15,0:15:30.61:0,31,247	0/0:17,0:17:44.60:0,45,662	0/0:17,0:17:43.26:0,43,263	0/0:7,0:7:8.48:0,8,54	0/0:20,0:20:47.74:0,48,738	0/0:23,0:23:56.99:0,57,761	1/1:33,3:35:14:327,14,0	0/0:18,0:18:51.06:0,51,662	0/0:10,0:10:30.03:0,30,378	0/0:22,0:22:31.05:0,31,243	0/0:24,0:24:50.90:0,51,342	0/1:13,1:14:59.61:60,0,82	1/1:5,1:6:12.41:66,12,0	0/1:57,1:58:99:180,0,191	0/0:7,0:7:17.92:0,18,187	0/0:11,0:11:17.98:0,18,189	0/0:18,0:18:54.05:0,54,718	0/0:18,0:18:39.76:0,40,259	0/0:23,0:23:61.60:0,62,410	1/1:15,0:13:4.15:70,4,0	0/0:2,0:2:5.90:0,6,40
chr10	47345079	.	ACC	A	2797.31	PASS	AB=0.684;AC=14;AF=0.250;AN=56;BaseQRankSum=-1.808;DP=529;FS=33.369;HRun=11;HaplotypeScore=78.1477;InbreedingCoeff=0.5485;MQ=73.38;MQ0=3;MQRankSum=0.880;QD=14.72;ReadPosRankSum=4.016;VQSLOD=0.0407;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:29:34.35:0,34,615	0/0:12,0:12:17.53:0,18,207	0/1:17,0:17:14.15:14,0,152	0/0:12,0:10:8.82:0,9,162	0/0:2,0:10:17.22:0,17,60	0/0:7,0:12:11.83:0,12,160	0/0:28,0:50:56.33:0,56,698	0/1:6,2:15:30.47:43,0,30	0/0:18,0:19:41.19:0,41,563	0/0:8,0:17:27.95:0,28,113	0/1:2,1:7:16.45:16,0,27	0/0:21,0:21:50.67:0,51,639	0/0:20,0:22:47.60:0,48,611	1/1:6,29:34:90.21:957,90,0	0/0:18,0:18:33.08:0,33,439	0/0:11,0:11:27.07:0,27,373	0/1:6,3:22:49:49,0,83	0/0:8,1:24:6.50:0,7,102	1/1:5,10:15:30.02:305,30,0	1/1:1,4:5:15.04:159,15,0	1/1:16,42:58:99:1138,109,0	0/0:7,0:8:11.52:0,12,125	0/0:8,0:10:6.02:0,6,92	0/0:21,0:21:39.55:0,40,517	0/0:6,0:18:22.33:0,22,77	0/0:9,0:23:40.03:0,40,149	1/1:0,13:14:28.74:297,29,0	0/0:1,0:2:2.50:0,2,9
chr10	47345746	.	CTG	C	12721.27	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=20.785;DP=850;FS=1.155;HRun=0;HaplotypeScore=137.2893;InbreedingCoeff=0.9994;MQ=72.05;MQ0=0;MQRankSum=-4.306;QD=32.62;ReadPosRankSum=0.865;VQSLOD=6.7583;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:59,0:59:99:0,163,2866	0/0:16,0:16:48.16:0,48,849	0/0:27,0:26:69.13:0,69,1162	0/0:34,0:34:76.87:0,77,1408	1/1:3,27:30:78.26:1071,78,0	0/0:31,0:31:87.30:0,87,1529	0/0:42,0:42:99:0,120,2067	1/1:2,20:22:60.20:823,60,0	0/0:30,0:30:87.30:0,87,1536	1/1:4,33:37:99:1356,99,0	1/1:1,16:17:33.11:453,33,0	0/0:46,0:46:99:0,135,2321	0/0:39,0:39:99:0,117,2025	1/1:2,38:40:87.29:1193,87,0	0/0:33,0:33:90.26:0,90,1499	0/0:23,0:23:66.23:0,66,1165	1/1:0,34:34:90.30:1228,90,0	1/1:1,18:19:45.15:618,45,0	1/1:7,11:17:33.09:427,33,0	1/1:2,19:21:45.15:618,45,0	1/1:2,55:57:99:1482,108,0	0/0:15,0:15:45.15:0,45,771	0/0:20,0:20:54.18:0,54,945	0/0:45,0:45:99:0,135,2371	1/1:0,25:25:60.20:824,60,0	1/1:2,38:40:99:1560,114,0	1/1:1,22:23:57.08:781,57,0	1/1:0,7:7:21.07:288,21,0
chr10	47346837	.	AGAG	A	6526.95	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=12.939;DP=752;FS=5.284;HRun=0;HaplotypeScore=117.8172;InbreedingCoeff=0.9999;MQ=77.12;MQ0=5;MQRankSum=-4.885;QD=37.08;ReadPosRankSum=0.422;VQSLOD=5.7965;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:81.26:0,81,1718	0/0:14,0:14:42.11:0,42,824	0/0:56,0:37:45.28:0,45,1213	0/0:91,0:47:95.78:0,96,1618	1/1:0,22:22:50.98:725,51,0	0/0:29,0:29:78.26:0,78,1721	0/0:21,0:21:57.18:0,57,1194	0/0:20,0:20:57.17:0,57,1167	0/0:26,0:26:75.26:0,75,1661	1/1:1,21:22:60.20:967,60,0	1/1:0,14:14:39:556,39,0	0/0:33,0:33:93.32:0,93,2090	0/0:26,0:26:75.26:0,75,1690	0/0:20,0:20:54.12:0,54,1126	0/0:31,0:31:87.30:0,87,1943	0/0:27,0:27:78.27:0,78,1766	1/1:2,32:34:72.22:1165,72,0	1/1:2,20:22:48.12:767,48,0	0/0:13,0:13:39.13:0,39,874	0/0:18,0:18:49.73:0,50,1129	0/0:24,0:24:66.11:0,66,1358	0/0:27,0:27:75.22:0,75,1545	0/0:22,0:22:63.19:0,63,1310	0/0:27,0:27:69.23:0,69,1502	1/1:0,24:24:57.07:855,57,0	1/1:0,22:21:63.19:997,63,0	0/0:19,0:18:54.17:0,54,1168	1/1:0,16:16:30.10:496,30,0
chr10	47347626	.	CAGAGAGAGAGAGAGAGAGAGAGAG	C	5494.49	PASS	AB=0.976;AC=28;AF=0.500;AN=56;BaseQRankSum=-0.189;DP=645;FS=6.750;HRun=0;HaplotypeScore=370.4645;InbreedingCoeff=0.6373;MQ=60.54;MQ0=12;MQRankSum=-3.023;QD=16.55;ReadPosRankSum=0.788;VQSLOD=1.6991;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:51.14:0,51,1439	0/1:13,0:12:48.08:48,0,254	0/0:33,0:26:18.17:0,18,273	0/0:39,0:22:16.42:0,16,188	1/1:14,0:15:3.01:45,3,0	0/0:16,0:16:21.06:0,21,689	0/0:26,0:26:37.89:0,38,742	1/1:19,19:38:50.97:651,51,0	0/0:25,0:23:33.08:0,33,910	1/1:34,0:33:20.44:1521,20,0	1/1:12,0:12:11.38:162,11,0	0/0:27,0:27:48.06:0,48,1105	0/0:24,0:25:58.16:0,58,1317	1/1:18,0:19:3.01:53,3,0	0/1:37,0:37:9.16:9,0,155	0/0:20,0:20:27.06:0,27,700	1/1:22,0:22:21.57:509,22,0	0/1:12,0:12:72.41:345,0,72	1/1:16,0:16:12.04:223,12,0	1/1:27,0:27:30.08:520,30,0	1/1:15,0:13:3:25,3,0	0/0:20,0:22:15.05:0,15,327	0/0:18,0:18:15.05:0,15,379	0/0:30,0:28:36.08:0,36,897	1/1:15,0:15:18.06:409,18,0	1/1:21,0:20:35.18:474,35,0	1/1:17,0:21:32.93:490,33,0	0/1:9,0:9:9.92:10,0,46
chr10	47347662	.	GAGAGAGAGAC	G	2014.04	PASS	AB=1.000;AC=22;AF=0.440;AN=50;BaseQRankSum=-0.529;DP=592;FS=4.034;HRun=0;HaplotypeScore=222.3091;InbreedingCoeff=-0.0344;MQ=38.27;MQ0=18;MQRankSum=-0.059;QD=5.36;ReadPosRankSum=2.472;VQSLOD=2.6018;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:45,0:44:82.05:82,0,393	0/1:8,0:8:12.84:13,0,48	./.	0/0:2,0:1:0.47:0,0,1	./.	0/1:22,0:21:74.06:80,0,74	0/1:21,0:19:14.29:61,0,14	0/0:36,0:33:32.68:0,33,226	1/1:23,0:20:30.05:435,30,0	0/1:40,0:38:5.84:6,0,286	0/0:22,0:20:2.99:0,3,23	0/0:28,0:28:29.94:0,30,209	0/1:24,0:24:12.29:537,0,12	0/1:19,0:18:0.10:0,0,0	0/0:34,0:33:3.73:0,4,56	1/1:20,0:20:13.60:324,14,0	0/1:18,0:17:11.69:12,0,57	0/1:13,0:11:19.61:20,0,125	0/1:13,0:11:31.81:32,0,56	0/0:24,0:20:6.54:0,7,50	./.	1/1:19,0:19:8.91:113,9,0	0/0:7,16:23:4.74:0,5,16	1/1:38,0:34:28.55:345,29,0	0/0:15,0:14:10.75:0,11,64	0/1:28,0:22:31.44:31,0,238	0/1:19,0:18:48.87:49,0,79	1/1:6,0:6:3:29,3,0
chr10	47347666	.	G	GAC	1600.33	PASS	AB=0.956;AC=22;AF=0.458;AN=48;BaseQRankSum=-5.788;DP=566;FS=2.407;HRun=0;HaplotypeScore=179.7901;InbreedingCoeff=-0.3320;MQ=37.79;MQ0=18;MQRankSum=-4.403;QD=3.75;ReadPosRankSum=1.996;VQSLOD=2.6086;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:44,2:45:92.78:93,0,324	0/0:6,0:6:8.88:0,9,72	./.	./.	./.	0/0:25,0:24:0.65:0,1,151	0/1:20,0:18:11.46:11,0,63	1/1:39,0:35:32.61:220,33,0	0/1:20,5:22:91.17:233,0,91	0/1:37,0:35:99:149,0,102	1/1:19,0:17:3:25,3,0	0/0:21,0:21:27.49:0,27,156	0/1:17,5:22:99:279,0,229	0/1:18,0:17:0:0,0,0	0/0:33,0:32:18.51:0,19,133	0/1:17,3:20:73.98:149,0,74	0/1:16,0:15:8.09:8,0,40	0/1:12,0:10:15.21:64,0,15	1/1:11,0:9:9.82:70,10,0	0/1:20,0:16:7.23:7,0,40	./.	0/1:15,2:17:15.93:79,0,16	0/0:21,0:21:4.74:0,5,16	0/1:35,3:34:99:141,0,186	0/1:14,0:12:14.23:14,0,29	0/1:26,0:20:70.07:128,0,70	0/1:18,0:17:10.88:60,0,11	0/1:9,0:9:8.21:12,0,8
chr10	47347670	.	GAC	G	1076.33	PASS	AB=0.991;AC=14;AF=0.292;AN=48;BaseQRankSum=0.243;DP=561;FS=9.511;HRun=0;HaplotypeScore=176.1535;InbreedingCoeff=0.1887;MQ=37.68;MQ0=18;MQRankSum=4.633;QD=4.02;ReadPosRankSum=-2.305;VQSLOD=1.8836;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:40,1:41:58.51:59,0,390	0/1:6,0:6:10.17:22,0,10	./.	./.	./.	1/1:23,3:25:6.44:200,6,0	1/1:20,1:19:18.33:158,18,0	0/0:41,0:37:41.49:0,41,285	0/1:22,0:20:14.93:101,0,15	0/0:35,0:32:77.17:0,77,688	0/0:19,0:17:2.99:0,3,23	0/0:20,0:20:24.21:0,24,208	0/1:23,0:23:54.66:183,0,55	0/1:18,0:17:0:0,0,0	0/1:36,2:37:61.11:124,0,61	0/1:20,0:20:11.60:100,0,12	0/0:16,0:15:18.15:0,18,187	0/0:12,0:10:19.83:0,20,128	0/0:12,0:10:11.50:0,12,78	0/0:20,0:16:10.95:0,11,92	./.	1/1:15,0:15:3.03:33,3,0	0/0:21,0:21:6.02:0,6,92	0/1:38,0:34:5.62:243,0,6	0/0:12,0:10:12.01:0,12,131	0/0:26,0:20:53.42:0,53,534	0/0:18,0:17:20.11:0,20,102	0/0:9,0:9:14.86:0,15,125
chr10	47347678	.	CAG	C	63.71	PASS	AB=0.936;AC=8;AF=0.167;AN=48;BaseQRankSum=4.521;DP=561;FS=0.000;HRun=0;HaplotypeScore=166.9991;InbreedingCoeff=0.0246;MQ=36.57;MQ0=24;MQRankSum=-5.286;QD=0.56;ReadPosRankSum=2.347;VQSLOD=2.7157;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:81:0,81,1322	1/1:5,0:5:3.59:14,4,0	./.	0/0:12,0:1:3.01:0,3,43	./.	0/0:28,1:28:14.93:0,15,122	0/1:26,0:24:9.29:9,0,38	0/0:34,0:28:63.19:0,63,1086	0/0:24,0:22:7.75:0,8,291	0/0:26,0:22:42.60:0,43,791	0/0:19,0:16:3.01:0,3,55	0/0:20,0:20:29.31:0,29,471	0/0:22,0:22:8.90:0,9,376	0/1:12,3:14:0:0,0,0	0/0:33,0:32:1.76:0,2,5	0/0:22,0:22:27.82:0,28,396	0/0:13,0:12:1.54:0,2,93	0/1:11,0:9:19.74:20,0,271	0/1:15,0:13:27.98:28,0,251	0/1:17,3:16:36.85:37,0,48	./.	0/0:12,0:11:3.01:0,3,35	./.	0/0:37,0:33:45.11:0,45,580	0/0:12,0:10:6.02:0,6,103	0/0:25,0:19:35.91:0,36,664	0/1:19,2:20:70.63:71,0,281	0/0:11,0:11:12.56:0,13,233
chr10	47347684	.	CAG	C	447.62	PASS	AB=0.857;AC=13;AF=0.250;AN=52;BaseQRankSum=3.025;DP=569;FS=3.817;HRun=0;HaplotypeScore=154.0393;InbreedingCoeff=-0.3106;MQ=36.31;MQ0=22;MQRankSum=-4.459;QD=1.96;ReadPosRankSum=0.442;VQSLOD=2.5138;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:78.72:0,79,1393	0/1:3,3:6:3.73:4,0,87	0/0:3,0:1:3.01:0,3,44	0/0:18,0:2:6.02:0,6,87	./.	0/0:27,1:27:11.84:0,12,81	0/0:23,1:22:8.63:0,9,65	0/0:33,0:27:69.14:0,69,1039	0/1:19,5:22:99:111,0,290	0/1:20,5:21:99:114,0,742	0/0:18,2:17:3.01:0,3,55	0/0:20,0:20:29.27:0,29,436	0/1:18,4:22:99:112,0,418	0/1:14,1:14:0:0,0,0	0/0:23,9:31:8.55:0,9,184	0/1:21,3:24:28.53:29,0,412	0/1:8,3:11:36.54:37,0,42	0/1:11,1:10:13.64:14,0,304	0/1:15,1:14:23.33:23,0,351	0/1:14,1:11:1.74:2,0,47	./.	0/0:12,3:14:9.02:0,9,104	0/0:20,1:21:2.99:0,3,24	0/0:37,1:35:43.37:0,43,567	0/0:14,0:12:3.01:0,3,55	0/1:21,3:18:78.77:79,0,546	0/1:18,4:22:35.01:35,0,386	0/1:9,2:11:21.87:22,0,257
chr10	47347726	.	GGC	G	126.43	PASS	AB=0.969;AC=11;AF=0.204;AN=54;BaseQRankSum=4.707;DP=660;FS=0.779;HRun=0;HaplotypeScore=177.8945;InbreedingCoeff=0.0884;MQ=51.18;MQ0=9;MQRankSum=-4.764;QD=0.80;ReadPosRankSum=-7.083;VQSLOD=0.5048;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,111,2058	0/0:8,0:8:13.89:0,14,169	0/0:45,0:25:66.83:0,67,1153	0/0:56,0:24:53.36:0,53,770	./.	0/0:21,0:21:60.16:0,60,1152	0/0:27,0:27:66.22:0,66,1306	0/1:21,0:18:35.58:36,0,199	0/0:22,0:20:32.23:0,32,366	0/1:19,2:20:19.01:19,0,216	0/0:15,0:13:3.01:0,3,33	0/0:29,0:29:51.06:0,51,550	0/0:31,0:31:54.23:0,54,677	0/1:16,0:16:0:1,0,0	0/0:31,0:31:39:0,39,426	0/0:27,0:27:22.04:0,22,458	1/1:7,1:8:0.63:39,1,0	0/0:7,0:7:6.55:0,7,80	0/0:11,0:9:22.76:0,23,217	0/0:18,3:16:0.33:0,0,1	1/1:14,1:12:0.89:2,1,0	0/1:19,0:17:5.45:5,0,236	0/0:20,0:20:16.42:0,16,198	0/0:46,1:46:66.18:0,66,735	0/0:18,2:19:3.01:0,3,32	0/1:26,1:23:79.96:80,0,207	0/1:21,0:20:21.86:22,0,138	0/1:9,1:10:46.35:46,0,112
chr10	47347734	.	GACAGAC	G	2421.08	PASS	AB=0.751;AC=11;AF=0.229;AN=48;BaseQRankSum=4.710;DP=711;FS=0.000;HRun=0;HaplotypeScore=216.3229;InbreedingCoeff=0.2157;MQ=51.00;MQ0=11;MQRankSum=-10.314;QD=15.93;ReadPosRankSum=2.247;VQSLOD=3.0305;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,102,3088	0/0:9,0:9:16.38:0,16,588	0/0:55,0:29:35.13:0,35,871	0/0:57,0:32:33.07:0,33,1274	./.	0/0:22,0:22:57.11:0,57,1462	0/0:23,0:23:51.09:0,51,1335	1/1:11,8:17:33.03:574,33,0	0/0:22,0:20:36.10:0,36,1076	0/1:14,10:23:99:685,0,192	./.	0/0:34,0:34:54.64:0,55,1590	0/0:30,0:30:69.12:0,69,2175	0/1:12,6:18:0:0,0,0	0/0:38,0:38:54.11:0,54,1535	0/0:27,0:27:54.14:0,54,1605	0/1:5,4:9:29.50:106,0,30	0/1:2,2:4:54.42:59,0,54	0/1:13,2:11:99:145,0,112	0/0:23,6:24:1.98:0,2,18	./.	0/0:20,0:18:33.10:0,33,1000	0/0:21,0:21:30.10:0,30,934	0/0:51,0:50:84.16:0,84,2403	./.	0/1:21,8:25:99:525,0,222	0/1:17,7:23:99:308,0,151	1/1:5,5:10:11.79:164,12,0
chr10	47347744	.	G	GACACAC	2131.76	PASS	AB=0.938;AC=11;AF=0.229;AN=48;BaseQRankSum=8.623;DP=731;FS=4.141;HRun=0;HaplotypeScore=233.8761;InbreedingCoeff=0.0455;MQ=49.81;MQ0=13;MQRankSum=-10.725;QD=11.46;ReadPosRankSum=-2.318;VQSLOD=1.9804;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,121,2231	0/0:10,0:10:21.05:0,21,437	0/0:49,0:23:31.07:0,31,589	0/0:67,0:34:42.96:0,43,1011	./.	0/0:27,0:27:63.06:0,63,1048	0/0:22,0:22:51.10:0,51,943	0/1:31,0:29:99:134,0,117	0/0:22,0:21:45.53:0,46,830	0/1:25,1:25:99:546,0,212	./.	0/0:31,0:31:56.93:0,57,1134	0/0:31,0:31:75.17:0,75,1579	1/1:12,5:17:1.24:3,1,0	0/0:40,0:40:69.15:0,69,1184	0/0:24,0:24:60.57:0,61,1144	0/1:9,0:9:15.14:80,0,15	0/0:3,0:3:5.54:0,6,25	0/1:12,1:9:76.33:116,0,76	1/1:26,2:26:3.20:11,3,0	./.	0/0:20,0:19:42.09:0,42,763	0/0:22,0:22:39.07:0,39,702	0/0:50,0:49:84.16:0,84,1655	./.	0/1:27,6:32:39.42:1027,0,39	0/1:15,4:19:47.81:221,0,48	0/1:10,0:10:7.36:126,0,7
chr10	47347750	.	G	GAGATGC	5573.04	PASS	AB=0.865;AC=12;AF=0.250;AN=48;BaseQRankSum=3.045;DP=778;FS=19.622;HRun=0;HaplotypeScore=240.7762;InbreedingCoeff=0.0048;MQ=48.01;MQ0=14;MQRankSum=-10.275;QD=25.80;ReadPosRankSum=-4.029;VQSLOD=2.5658;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,138,3170	0/0:11,0:11:21.02:0,21,517	0/0:52,0:21:1.90:0,2,904	0/0:73,0:35:50.97:0,51,1592	./.	0/0:27,0:27:66.18:0,66,1488	0/0:21,0:21:42.12:0,42,982	0/1:41,0:40:99:886,0,810	0/0:21,0:21:41.96:0,42,1020	0/1:29,4:31:99:1080,0,229	./.	0/0:31,0:31:56.87:0,57,1367	0/0:32,0:32:75.19:0,75,1821	1/1:13,7:21:4.08:74,4,0	0/0:39,0:39:72.25:0,72,1741	0/0:26,0:26:63.56:0,64,1447	0/1:8,2:10:56.18:239,0,56	0/1:5,0:5:53.63:65,0,54	0/1:15,2:10:99:301,0,114	1/1:15,15:28:5.40:156,5,0	./.	0/0:22,0:21:45.14:0,45,1043	0/0:22,0:22:39.13:0,39,960	0/0:51,0:50:72.56:0,73,1841	./.	0/1:19,13:32:83.27:2018,0,83	0/1:12,8:20:48.46:664,0,48	0/1:6,1:7:50.31:91,0,50
chr10	47347783	.	A	ATG	431.92	PASS	AB=0.938;AC=9;AF=0.161;AN=56;BaseQRankSum=5.512;DP=741;FS=1.803;HRun=0;HaplotypeScore=190.6194;InbreedingCoeff=0.1952;MQ=49.64;MQ0=8;MQRankSum=-5.460;QD=2.31;ReadPosRankSum=-3.854;VQSLOD=1.6016;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,129,2093	0/0:10,0:10:17.93:0,18,294	0/0:41,0:21:57.74:0,58,777	0/0:78,0:42:71.75:0,72,1135	0/0:30,6:36:9.03:0,9,147	0/0:25,0:25:48.15:0,48,759	0/0:22,0:22:51.17:0,51,827	0/1:27,6:32:99:203,0,1020	0/0:21,0:20:30.09:0,30,465	0/1:33,3:34:99:135,0,1111	0/0:15,1:16:9.03:0,9,147	0/0:31,0:30:38.94:0,39,636	0/0:29,0:29:66.91:0,67,1050	0/0:19,1:20:2.94:0,3,18	0/0:32,0:32:54.66:0,55,882	0/0:20,0:20:42.14:0,42,682	0/0:10,1:10:15.05:0,15,218	0/0:3,0:3:9.03:0,9,133	0/1:25,0:20:11.81:12,0,747	1/1:37,2:39:4.98:58,5,0	0/0:13,0:12:6.02:0,6,98	0/0:23,0:22:36.12:0,36,587	0/0:21,0:21:39.13:0,39,615	0/0:35,0:34:45.15:0,45,734	0/0:14,3:18:0:0,0,0	0/1:33,3:36:99:104,0,1204	0/1:17,0:17:21.19:21,0,525	1/1:1,0:1:3.01:32,3,0
chr10	47347804	.	CAG	C	7970.54	PASS	AC=48;AF=0.889;AN=54;BaseQRankSum=9.410;DP=725;FS=7.692;HRun=0;HaplotypeScore=152.5434;InbreedingCoeff=0.8215;MQ=44.47;MQ0=13;MQRankSum=-1.943;QD=14.34;ReadPosRankSum=1.552;VQSLOD=4.6080;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,135,2095	1/1:3,6:9:11.50:141,12,0	0/0:38,0:16:27.53:0,28,390	0/0:73,0:35:24.08:0,24,555	1/1:3,30:33:12:137,12,0	1/1:2,22:23:39.13:506,39,0	1/1:1,24:25:51.17:662,51,0	1/1:18,8:21:30.03:341,30,0	1/1:2,16:17:23.99:271,24,0	1/1:11,33:42:93.26:1158,93,0	1/1:2,10:13:15.03:180,15,0	1/1:9,20:27:24.06:292,24,0	1/1:13,14:27:33.11:423,33,0	1/1:3,14:17:2.85:38,3,0	1/1:11,24:35:39.04:506,39,0	1/1:5,12:17:21.05:254,21,0	1/1:5,7:12:17.87:173,18,0	1/1:5,2:7:9.05:109,9,0	1/1:18,7:19:32.96:341,33,0	1/1:11,27:38:8.99:84,9,0	1/1:8,10:16:8.94:95,9,0	1/1:8,16:23:17.95:210,18,0	1/1:6,16:21:26.99:314,27,0	1/1:11,15:25:21.07:272,21,0	1/1:4,12:16:6.02:77,6,0	1/1:11,23:34:72.21:903,72,0	1/1:4,13:17:39.08:484,39,0	./.
chr10	47347838	.	T	TAC	8734.68	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=7.905;DP=743;FS=7.851;HRun=0;HaplotypeScore=152.3287;InbreedingCoeff=0.8423;MQ=62.39;MQ0=6;MQRankSum=-2.846;QD=16.99;ReadPosRankSum=2.140;VQSLOD=4.8390;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:61,0:61:99:0,141,1744	1/1:1,4:5:6.01:78,6,0	0/0:54,0:42:60.66:0,61,799	0/0:55,0:40:23.10:0,23,599	1/1:10,32:42:33.09:544,33,0	0/0:25,0:24:36.11:0,36,478	0/0:29,0:29:53.91:0,54,673	1/1:5,17:19:28.55:669,29,0	1/1:7,17:23:20.91:357,21,0	1/1:20,24:43:81.62:1381,82,0	1/1:5,9:16:16.83:235,17,0	1/1:9,13:21:14.88:221,15,0	1/1:6,17:23:30.04:571,30,0	1/1:8,11:19:2.77:52,3,0	1/1:8,28:36:21.06:344,21,0	1/1:4,13:17:6.48:77,6,0	1/1:5,11:16:21.07:348,21,0	1/1:1,10:11:18.06:310,18,0	1/1:7,7:11:26.97:330,27,0	1/1:5,24:29:36.08:613,36,0	1/1:3,25:27:18.04:283,18,0	1/1:7,15:22:18.06:307,18,0	1/1:10,9:18:12:150,12,0	1/1:4,25:30:6.02:103,6,0	1/1:3,14:17:8.98:156,9,0	1/1:10,20:30:68.92:1012,69,0	1/1:4,15:19:30.56:492,31,0	1/1:3,1:4:6.02:103,6,0
chr10	47347959	.	GGGA	G	547.45	PASS	AB=0.955;AC=11;AF=0.196;AN=56;BaseQRankSum=4.986;DP=561;FS=4.803;HRun=0;HaplotypeScore=113.9092;InbreedingCoeff=-0.0412;MQ=41.21;MQ0=69;MQRankSum=-4.526;QD=3.78;ReadPosRankSum=-4.514;VQSLOD=0.4878;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:28:42.74:0,43,1169	0/0:5,0:4:8.98:0,9,117	0/0:58,0:9:14.81:0,15,245	0/0:83,0:23:33.35:0,33,794	0/0:16,0:14:20.97:0,21,394	0/0:17,0:15:38.15:0,38,754	0/0:20,0:20:51.64:0,52,1161	0/0:27,0:18:48.06:0,48,956	0/1:12,1:12:66.16:140,0,66	0/1:16,0:13:2.80:3,0,548	0/0:14,0:13:8.86:0,9,180	0/1:12,1:13:24.53:149,0,25	0/1:12,2:14:60.98:88,0,61	0/0:10,0:7:9.03:0,9,208	0/0:15,0:15:26.88:0,27,554	0/1:12,1:12:37.40:37,0,118	0/1:20,0:18:31.85:32,0,220	0/1:18,0:17:24.77:25,0,353	0/0:16,0:10:24.08:0,24,548	0/0:20,0:17:26.97:0,27,419	0/0:15,0:9:11.64:0,12,203	1/1:7,1:8:8.77:62,9,0	0/1:14,1:13:19.32:19,0,46	0/1:14,0:13:16.16:139,0,16	0/0:18,0:12:30.10:0,30,645	0/0:27,0:22:54.12:0,54,960	0/0:10,0:5:12.03:0,12,182	0/0:13,0:9:25.92:0,26,314
chr10	47347962	.	A	AGAG	2905.50	PASS	AB=0.948;AC=19;AF=0.339;AN=56;BaseQRankSum=5.293;DP=542;FS=14.776;HRun=0;HaplotypeScore=103.2901;InbreedingCoeff=0.4970;MQ=39.08;MQ0=69;MQRankSum=-4.595;QD=16.42;ReadPosRankSum=-3.012;VQSLOD=1.9269;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:25:53.30:0,53,864	0/0:4,0:3:3.90:0,4,52	0/0:55,0:8:11.84:0,12,148	0/0:81,0:22:28.43:0,28,587	0/0:16,0:14:2.77:0,3,129	0/0:16,0:14:35.15:0,35,543	0/0:21,0:21:50.50:0,51,834	0/1:28,0:20:12.12:12,0,504	1/1:4,7:10:27.09:563,27,0	0/1:16,0:13:50.58:51,0,266	0/0:15,0:14:6.02:0,6,100	1/1:6,8:13:27.08:516,27,0	1/1:5,9:14:19.84:318,20,0	0/0:10,0:7:9.03:0,9,126	0/0:14,0:14:27.09:0,27,447	1/1:3,9:11:30.10:630,30,0	0/1:16,0:15:12.31:12,0,158	0/1:17,0:16:99:131,0,135	0/0:18,0:11:15.77:0,16,366	0/0:19,0:16:23.92:0,24,300	0/0:15,0:9:8.04:0,8,87	1/1:4,4:8:8.90:104,9,0	1/1:8,6:12:27.44:456,27,0	1/1:8,6:12:15.04:255,15,0	0/0:17,0:12:24.07:0,24,333	0/0:26,0:21:7.51:0,8,377	0/0:8,0:3:9.01:0,9,110	0/1:9,0:7:50.48:50,0,87
chr10	47347964	.	A	AG	1012.17	PASS	AB=0.963;AC=13;AF=0.232;AN=56;BaseQRankSum=6.955;DP=534;FS=6.493;HRun=1;HaplotypeScore=100.7811;InbreedingCoeff=0.4993;MQ=37.26;MQ0=71;MQRankSum=-5.325;QD=9.20;ReadPosRankSum=-1.586;VQSLOD=0.4035;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:25:51.70:0,52,673	0/0:3,0:3:5.05:0,5,45	0/0:52,0:7:11.62:0,12,137	0/0:75,0:19:30.89:0,31,461	0/0:16,0:13:12.03:0,12,141	0/0:16,0:14:36.10:0,36,449	0/0:21,0:21:50.66:0,51,660	0/0:29,0:21:50.38:0,50,587	1/1:10,1:10:26.03:238,26,0	0/0:14,2:13:1.21:0,1,259	0/0:16,0:14:6.02:0,6,78	1/1:12,1:12:26.78:215,27,0	0/1:13,0:12:18.39:99,0,18	0/0:10,0:7:9.03:0,9,116	0/0:13,0:13:24.08:0,24,309	1/1:11,1:11:29.70:272,30,0	0/0:17,0:15:1.16:0,1,137	0/1:18,0:16:38.84:39,0,147	0/0:18,0:11:26.12:0,26,318	0/0:18,0:15:23.99:0,24,290	0/0:15,0:9:3.52:0,4,81	1/1:11,0:10:3.41:23,3,0	0/1:14,2:14:18.28:169,0,18	1/1:16,0:14:14.97:128,15,0	0/0:17,0:11:26.30:0,26,319	0/0:25,0:20:44.79:0,45,493	0/0:8,0:3:9.01:0,9,99	0/0:11,0:7:7.08:0,7,106
chr10	47347969	.	GGAGAGAGAGAGAGAGAGAGA	G	317.29	PASS	AB=1.000;AC=7;AF=0.140;AN=50;BaseQRankSum=1.793;DP=509;FS=8.841;HRun=0;HaplotypeScore=181.0853;InbreedingCoeff=0.5709;MQ=36.85;MQ0=69;MQRankSum=-3.375;QD=6.10;ReadPosRankSum=0.660;VQSLOD=2.0448;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:24:23.92:0,24,558	1/1:3,1:3:6.02:197,6,0	0/0:46,0:6:0:0,0,0	./.	0/0:15,0:12:3.01:0,3,247	0/0:16,0:15:12.04:0,12,404	0/0:20,0:20:9.03:0,9,306	0/0:28,0:19:7.79:0,8,51	0/0:11,0:10:14.97:0,15,432	0/0:16,0:13:21.07:0,21,793	0/1:17,0:15:0:0,0,0	0/0:13,0:12:15.05:0,15,310	0/0:12,0:11:15.05:0,15,439	0/0:10,0:7:3.01:0,3,64	1/1:9,5:14:3.01:159,3,0	0/0:14,0:12:12.04:0,12,430	0/0:17,0:15:12.04:0,12,435	0/0:15,0:13:12.04:0,12,737	./.	1/1:16,0:14:13.98:75,14,0	0/0:12,0:7:6.01:0,6,96	0/0:11,0:10:8.92:0,9,194	0/0:16,0:14:12.03:0,12,249	0/0:14,0:14:6.02:0,6,152	0/0:16,0:10:6.49:0,6,251	0/0:26,0:20:24.08:0,24,1189	./.	0/0:12,0:8:15.05:0,15,597
chr10	47347973	.	A	AGAG	2934.36	PASS	AB=0.947;AC=34;AF=0.607;AN=56;BaseQRankSum=2.583;DP=494;FS=3.672;HRun=0;HaplotypeScore=105.8032;InbreedingCoeff=0.3129;MQ=34.30;MQ0=73;MQRankSum=-3.341;QD=8.24;ReadPosRankSum=0.055;VQSLOD=3.0454;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:22:35.69:0,36,419	0/0:6,0:4:6.44:0,6,58	0/1:40,0:6:10.26:10,0,20	0/0:56,0:13:11.96:0,12,106	1/1:16,0:13:3.01:64,3,0	0/0:18,0:16:30.07:0,30,356	0/0:17,0:17:29.42:0,29,381	0/1:25,0:17:14.54:325,0,15	1/1:13,0:11:14.69:171,15,0	1/1:8,8:13:5.26:338,5,0	0/1:16,0:15:0:0,0,0	1/1:12,0:10:17.03:187,17,0	1/1:12,0:10:21.48:224,21,0	1/1:9,0:6:3.01:40,3,0	0/0:11,0:11:12.03:0,12,141	1/1:15,0:12:15.62:210,16,0	0/1:8,11:17:51.62:73,0,52	0/1:14,0:12:28.26:156,0,28	1/1:15,0:9:7.56:108,8,0	0/1:18,0:15:6.30:40,0,6	1/1:12,0:7:6.49:81,6,0	1/1:12,0:10:2.58:53,3,0	1/1:17,0:15:21.65:116,22,0	1/1:16,0:14:7.38:73,7,0	0/1:17,0:11:3.40:221,0,3	0/1:30,0:24:73.25:414,0,73	0/0:6,0:1:0.89:0,1,2	1/1:11,0:8:13.55:205,14,0
chr10	47347975	.	A	AG	2613.11	PASS	AB=0.840;AC=32;AF=0.571;AN=56;BaseQRankSum=5.744;DP=486;FS=0.000;HRun=1;HaplotypeScore=92.6440;InbreedingCoeff=0.2701;MQ=34.07;MQ0=73;MQRankSum=-3.886;QD=7.75;ReadPosRankSum=0.523;VQSLOD=0.6143;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:21:35.76:0,36,414	0/0:6,0:4:7.99:0,8,62	0/1:35,0:3:10.09:10,0,21	0/0:52,0:10:11.96:0,12,106	1/1:5,12:14:2.90:38,3,0	0/0:17,0:15:23.12:0,23,313	0/0:17,0:17:24.45:0,24,373	0/1:22,4:18:24.53:324,0,25	1/1:14,0:11:10.71:180,11,0	0/1:17,2:15:42.15:214,0,42	0/0:6,10:15:2.99:0,3,25	1/1:12,0:10:22.25:200,22,0	1/1:12,0:10:21.72:212,22,0	1/1:7,1:5:3.01:40,3,0	0/0:11,0:10:11.83:0,12,128	1/1:15,0:12:31.13:257,31,0	0/1:19,1:18:10.27:10,0,92	0/1:5,9:12:64.22:93,0,64	1/1:11,1:6:7.57:108,8,0	1/1:16,3:16:12.92:77,13,0	1/1:10,2:7:6.02:81,6,0	1/1:12,0:10:8:35,8,0	1/1:16,0:14:24.96:117,25,0	1/1:15,1:14:13.69:94,14,0	0/1:14,2:10:15.98:220,0,16	0/1:14,16:24:99:348,0,154	0/0:5,1:1:3:0,3,26	0/1:9,2:8:23.72:139,0,24
chr10	47347976	.	GA	G	2841.68	PASS	AB=0.848;AC=31;AF=0.554;AN=56;BaseQRankSum=6.001;DP=473;FS=1.212;HRun=1;HaplotypeScore=83.5090;InbreedingCoeff=0.3200;MQ=33.76;MQ0=72;MQRankSum=-4.029;QD=9.14;ReadPosRankSum=-0.400;VQSLOD=0.9703;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:20:35.66:0,36,414	0/0:6,0:4:8.04:0,8,68	0/1:34,1:3:10.09:10,0,21	0/0:51,0:9:11.96:0,12,106	1/1:16,0:13:2.77:15,3,0	0/0:17,0:15:4.67:0,5,283	0/1:17,0:17:6.84:7,0,348	0/1:13,13:18:23.43:338,0,23	1/1:3,10:10:8.91:242,9,0	0/1:19,1:16:99:163,0,137	0/0:17,0:15:5.97:0,6,58	1/1:1,9:9:23.76:278,24,0	1/1:2,8:9:22.25:246,22,0	1/1:1,7:5:3.01:40,3,0	0/0:11,0:10:8.52:0,9,114	1/1:1,13:12:32.99:387,33,0	0/0:19,0:17:11.74:0,12,131	0/0:12,1:11:4.47:0,4,94	1/1:4,7:5:7.57:108,8,0	1/1:4,0:16:16.76:133,17,0	1/1:5,6:7:6.02:81,6,0	1/1:6,4:9:10.87:83,11,0	1/1:5,7:12:23.25:164,23,0	1/1:10,6:14:14.96:159,15,0	0/1:5,11:10:16.30:220,0,16	0/1:28,1:23:99:274,0,229	0/0:3,3:1:3:0,3,26	0/1:8,3:8:61.39:80,0,61
chr10	47348748	.	A	ATT	6991.18	PASS	AB=0.581;AC=27;AF=0.482;AN=56;BaseQRankSum=2.559;DP=745;FS=10.614;HRun=10;HaplotypeScore=101.9220;InbreedingCoeff=0.9291;MQ=71.36;MQ0=1;MQRankSum=-0.549;QD=17.70;ReadPosRankSum=-0.929;VQSLOD=2.5423;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:90.09:0,90,908	0/0:8,0:8:18.02:0,18,183	0/0:22,0:23:53.69:0,54,442	0/0:13,0:14:20.96:0,21,209	1/1:4,20:27:67.54:823,68,0	0/0:24,0:24:66.13:0,66,671	0/0:30,0:30:75.07:0,75,738	1/1:11,1:45:83.29:331,83,0	0/0:24,0:24:66.10:0,66,660	1/1:6,19:27:34.62:775,35,0	1/1:4,17:23:49.97:582,50,0	0/0:27,0:30:71.33:0,71,740	0/0:22,0:22:66.13:0,66,664	1/1:3,0:34:47.35:233,47,0	0/0:35,0:35:96.16:0,96,969	0/0:22,0:23:62.70:0,63,599	1/1:6,22:30:54.17:775,54,0	1/1:8,12:22:42.09:575,42,0	1/1:6,0:24:30.44:151,30,0	1/1:2,1:33:70.86:293,71,0	0/1:7,0:25:12.87:99,0,13	0/0:28,0:28:69.09:0,69,695	0/0:29,0:29:78.13:0,78,789	0/0:21,0:21:51.08:0,51,512	1/1:2,21:23:50.61:698,51,0	1/1:3,27:33:89.18:1199,89,0	1/1:4,0:31:34.87:189,35,0	1/1:7,9:16:18.06:268,18,0
chr10	47350320	.	ATG	A	5338.90	PASS	AB=0.898;AC=11;AF=0.196;AN=56;BaseQRankSum=5.311;DP=1119;FS=38.207;HRun=0;HaplotypeScore=201.6623;InbreedingCoeff=0.8837;MQ=49.62;MQ0=28;MQRankSum=-0.421;QD=16.84;ReadPosRankSum=2.309;VQSLOD=3.1210;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:57.09:0,57,885	0/0:21,0:21:54.18:0,54,920	0/0:33,1:9:19.83:0,20,262	0/0:37,0:12:23.76:0,24,277	0/0:28,0:28:54.18:0,54,903	0/0:29,0:29:63.18:0,63,1009	0/0:31,0:31:70.57:0,71,1348	0/1:70,9:54:99:763,0,411	0/0:55,0:56:99:0,132,2127	0/0:55,0:55:99:0,132,2162	0/0:34,0:33:66.23:0,66,1123	0/0:40,0:40:84.27:0,84,1392	0/0:54,0:53:99:0,117,1951	1/1:4,45:48:56.76:756,57,0	0/0:44,0:44:87.27:0,87,1437	0/0:47,0:47:99:0,108,1724	0/0:39,0:39:58.94:0,59,1085	0/0:32,0:32:67.50:0,67,1156	1/1:15,21:27:58:755,58,0	1/1:2,31:33:57.19:758,57,0	1/1:17,69:82:87.25:1157,87,0	0/0:32,0:31:84.24:0,84,1341	0/0:30,0:30:78.27:0,78,1330	0/0:48,0:46:75.23:0,75,1268	0/0:37,0:36:75.24:0,75,1247	0/0:41,0:39:99:0,111,1829	1/1:0,34:34:87.28:1149,87,0	0/0:6,0:6:18.06:0,18,311
chr10	47350368	.	GTA	G	850.17	PASS	AB=0.865;AC=14;AF=0.250;AN=56;BaseQRankSum=6.608;DP=1223;FS=18.186;HRun=0;HaplotypeScore=310.9965;InbreedingCoeff=-0.3476;MQ=41.01;MQ0=37;MQRankSum=-4.385;QD=1.29;ReadPosRankSum=-6.912;VQSLOD=0.0306;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:63.20:0,63,1157	0/1:14,3:16:48.42:48,0,519	0/0:46,0:10:24.08:0,24,425	0/0:56,1:12:22.44:0,22,527	0/0:34,0:33:8.93:0,9,508	0/0:29,0:29:81.26:0,81,1506	0/0:28,0:28:75.08:0,75,1401	0/1:82,6:70:99:141,0,2074	0/0:56,13:61:0.41:0,0,1365	0/1:51,0:50:99:99,0,1605	0/0:34,0:34:27.09:0,27,520	0/0:36,19:49:49.27:0,49,799	0/1:47,10:49:89.33:89,0,1282	0/1:41,22:61:28.29:28,0,686	0/1:43,15:49:92.06:92,0,877	0/1:51,13:58:99:130,0,1141	0/1:35,1:36:86.69:87,0,371	0/0:22,1:23:20.95:0,21,627	0/1:22,4:21:7.27:7,0,831	0/0:33,10:37:33.60:0,34,554	0/0:69,1:59:45.47:0,45,813	0/1:25,11:32:2.95:3,0,604	0/1:29,8:32:12.38:12,0,707	0/1:40,6:41:39.97:40,0,632	0/0:40,0:40:45.09:0,45,811	0/1:49,0:44:99:133,0,1318	0/1:24,8:29:88.02:88,0,797	0/0:8,0:8:2.05:0,2,309
chr10	47350387	.	TGC	T	7109.27	PASS	AB=0.811;AC=24;AF=0.429;AN=56;BaseQRankSum=4.611;DP=1198;FS=25.871;HRun=0;HaplotypeScore=287.6128;InbreedingCoeff=-0.5878;MQ=41.92;MQ0=40;MQRankSum=-0.386;QD=7.21;ReadPosRankSum=0.368;VQSLOD=3.0646;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:84.29:0,84,1594	0/1:12,0:11:88.02:224,0,88	0/0:52,2:11:10.26:0,10,423	0/0:61,2:17:39.40:0,39,533	0/1:20,15:34:99:196,0,303	0/0:27,0:27:78.14:0,78,1405	0/0:33,0:33:87.13:0,87,1651	0/1:77,6:66:99:521,0,1230	0/1:47,20:59:99:598,0,490	0/1:37,22:58:99:912,0,1232	0/1:19,15:34:99:162,0,196	0/1:40,15:49:99:214,0,445	0/1:37,12:41:99:441,0,414	0/1:47,14:59:57.56:225,0,58	0/1:47,16:54:99:343,0,737	0/1:44,18:56:99:488,0,513	0/1:24,7:31:99:130,0,498	0/1:23,2:24:99:226,0,337	0/1:21,6:22:99:399,0,269	1/1:21,16:31:14.28:142,14,0	0/1:58,2:45:4.20:104,0,4	0/1:28,9:33:99:235,0,369	0/1:24,6:25:99:223,0,127	0/1:32,5:32:99:143,0,203	0/1:26,12:38:99:181,0,136	0/1:26,15:39:99:544,0,949	0/1:27,9:32:99:370,0,143	0/1:4,3:7:87.83:88,0,100
chr10	47350422	.	ATGTGTGTGTGTT	A	2950.31	PASS	AB=0.963;AC=9;AF=0.161;AN=56;BaseQRankSum=3.797;DP=1160;FS=4.551;HRun=0;HaplotypeScore=415.3531;InbreedingCoeff=0.4235;MQ=42.62;MQ0=45;MQRankSum=-10.323;QD=11.57;ReadPosRankSum=-2.500;VQSLOD=0.5591;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,99,3793	0/0:12,0:11:17.86:0,18,743	0/0:34,0:3:3.01:0,3,38	0/0:51,0:10:21.01:0,21,229	0/0:33,0:33:62.82:0,63,2670	0/0:24,0:24:66.21:0,66,2352	0/0:43,0:42:99:0,115,3833	0/1:79,0:52:50.46:1076,0,50	0/0:60,0:51:30.60:0,31,2845	0/0:60,0:58:99:0,103,5262	0/0:26,0:26:39.05:0,39,1694	0/0:56,0:50:58.26:0,58,2508	0/0:54,0:46:65.71:0,66,2069	1/1:36,9:42:11.94:183,12,0	0/0:65,0:56:87.06:0,87,4169	0/0:61,0:55:39.45:0,39,2639	0/0:44,0:43:58.83:0,59,2754	0/0:29,0:28:6.97:0,7,2301	0/1:21,3:16:42.82:673,0,43	1/1:21,8:22:1.64:4,2,0	0/0:40,1:37:2.60:0,3,8	0/0:44,0:40:64.61:0,65,2178	0/0:30,0:24:26.32:0,26,848	0/0:48,0:44:40.75:0,41,1629	0/0:34,0:34:40.55:0,41,1821	0/1:45,0:42:22.81:23,0,2732	1/1:21,12:29:8.80:1127,9,0	0/0:6,0:6:9.03:0,9,314
chr10	47350426	.	G	GTA	647.66	PASS	AB=0.918;AC=7;AF=0.125;AN=56;BaseQRankSum=5.946;DP=1144;FS=0.639;HRun=0;HaplotypeScore=313.6518;InbreedingCoeff=0.2079;MQ=43.46;MQ0=48;MQRankSum=-6.706;QD=2.44;ReadPosRankSum=-5.553;VQSLOD=0.9756;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:90.24:0,90,1293	0/0:11,0:10:14.95:0,15,228	0/0:32,0:3:8.97:0,9,89	0/0:50,0:11:29.64:0,30,280	0/0:30,0:30:57.16:0,57,857	0/0:24,0:24:72.18:0,72,1012	0/0:44,0:41:95.79:0,96,1600	0/1:85,1:57:99:127,0,659	0/0:55,0:46:59.51:0,60,880	0/0:60,0:58:99:0,161,2146	0/0:24,0:24:33.09:0,33,482	0/0:54,0:48:50.84:0,51,778	0/0:55,0:47:63.13:0,63,891	0/1:39,6:41:21.98:62,0,22	0/0:63,0:54:81.65:0,82,1217	0/0:60,0:54:68.98:0,69,967	0/0:48,0:47:67.07:0,67,1050	0/0:29,0:29:12.16:0,12,868	0/1:23,3:15:99:202,0,117	1/1:24,3:21:5.37:30,5,0	0/1:41,5:36:0.06:0,0,1	0/0:37,0:33:45.15:0,45,686	0/0:28,0:22:26.75:0,27,371	0/0:51,0:46:35.98:0,36,527	0/0:32,0:32:42.11:0,42,601	0/0:43,0:40:99:0,106,1292	0/1:31,3:31:94.10:348,0,94	0/0:9,0:9:18.01:0,18,207
chr10	47350476	.	ATG	A	1760.85	PASS	AB=0.936;AC=15;AF=0.268;AN=56;BaseQRankSum=-0.994;DP=1037;FS=2.825;HRun=0;HaplotypeScore=261.5830;InbreedingCoeff=0.1275;MQ=50.53;MQ0=48;MQRankSum=1.716;QD=3.69;ReadPosRankSum=-0.103;VQSLOD=2.7616;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:46:99:0,105,1711	0/0:15,0:15:27.04:0,27,392	0/0:35,0:10:27.09:0,27,427	0/0:29,0:10:20.30:0,20,258	1/1:32,0:32:0.90:100,1,0	0/0:21,0:21:54.17:0,54,869	0/0:41,0:38:84.13:0,84,1314	0/1:41,1:22:21.74:125,0,22	0/0:45,0:43:78.27:0,78,1286	0/1:58,2:57:30.74:426,0,31	0/1:20,0:20:3.39:139,0,3	0/0:39,0:36:66.22:0,66,1072	0/0:53,0:50:87.30:0,87,1445	0/1:35,3:36:4.05:4,0,34	0/0:35,0:34:45.12:0,45,680	0/0:42,0:42:78.11:0,78,1243	0/1:34,3:37:66.34:218,0,66	0/1:41,2:42:26.41:134,0,26	0/1:20,3:16:36.57:57,0,37	0/0:24,1:24:6.18:0,6,19	0/1:63,1:56:15.40:15,0,64	0/0:47,0:46:87.27:0,87,1408	0/0:25,0:25:42.12:0,42,647	0/0:49,0:46:56.14:0,56,932	1/1:29,1:30:7.82:224,8,0	1/1:49,0:46:0.08:377,0,0	0/1:30,7:36:2.28:93,0,2	0/0:12,0:12:4.40:0,4,11
chr10	47350488	.	A	ATG	9397.17	PASS	AB=0.858;AC=43;AF=0.768;AN=56;BaseQRankSum=6.433;DP=1048;FS=7.820;HRun=0;HaplotypeScore=234.7237;InbreedingCoeff=0.6733;MQ=51.09;MQ0=40;MQRankSum=4.816;QD=10.63;ReadPosRankSum=4.596;VQSLOD=3.4884;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:45:99:0,105,1242	1/1:4,14:18:17.89:297,18,0	0/0:35,0:14:21:0,21,213	0/0:22,0:9:11.82:0,12,95	1/1:31,0:31:71.40:341,71,0	0/0:24,0:24:51.12:0,51,607	0/0:37,0:34:61.82:0,62,738	1/1:41,0:25:21.86:152,22,0	1/1:48,0:46:66.19:760,66,0	1/1:52,0:50:1.36:500,1,0	1/1:26,0:26:15.02:364,15,0	1/1:41,0:38:56.83:629,57,0	1/1:55,1:53:37.70:789,38,0	1/1:44,0:42:48.38:361,48,0	0/1:9,26:34:13.44:322,0,13	1/1:47,0:47:65.66:727,66,0	0/1:32,0:32:2.84:137,0,3	1/1:40,0:40:27.23:385,27,0	1/1:29,0:18:21.68:170,22,0	1/1:27,0:26:49.83:235,50,0	0/1:66,0:57:37.28:236,0,37	1/1:43,0:42:78.21:869,78,0	1/1:26,0:26:39.58:436,40,0	1/1:51,0:48:8.88:438,9,0	1/1:31,0:31:25.09:233,25,0	1/1:53,0:49:54.95:619,55,0	1/1:35,0:35:48.95:237,49,0	1/1:12,0:12:30.86:162,31,0
chr10	47350490	.	G	GTA	8375.74	PASS	AB=0.952;AC=21;AF=0.375;AN=56;BaseQRankSum=-14.290;DP=1044;FS=5.801;HRun=0;HaplotypeScore=237.3587;InbreedingCoeff=0.3700;MQ=50.99;MQ0=44;MQRankSum=5.150;QD=13.73;ReadPosRankSum=3.773;VQSLOD=4.2963;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:46:99:0,117,1654	0/1:17,0:17:4.13:132,0,4	0/0:31,0:13:36.06:0,36,447	0/0:25,0:9:23.97:0,24,251	0/0:31,0:31:43.66:0,44,387	0/0:23,0:23:60.16:0,60,847	0/0:34,0:31:80.93:0,81,1076	0/0:43,0:26:7.89:0,8,223	1/1:4,42:45:66.23:1271,66,0	0/0:52,0:50:80.07:0,80,736	0/1:25,0:25:43.45:43,0,264	1/1:3,36:37:57.19:1076,57,0	1/1:4,49:51:61.06:1373,61,0	0/1:45,0:43:25.36:25,0,217	0/1:35,0:34:99:147,0,126	1/1:5,42:48:65.77:1250,66,0	0/1:30,0:31:0.74:1,0,268	0/0:41,0:41:16.33:0,16,402	0/1:29,0:18:6.86:7,0,149	0/0:28,0:27:35.71:0,36,277	0/1:66,0:56:17.46:17,0,319	1/1:0,42:41:78.21:1504,78,0	1/1:2,26:29:39.61:753,40,0	0/1:17,32:47:12.50:762,0,13	0/0:31,0:31:71.66:0,72,440	0/1:52,0:48:14.77:15,0,471	0/0:36,0:35:50.38:0,50,379	0/0:12,0:12:9.42:0,9,126
chr10	47351061	.	A	ACG	969.30	PASS	AB=0.914;AC=8;AF=0.143;AN=56;BaseQRankSum=-1.582;DP=665;FS=5.336;HRun=0;HaplotypeScore=175.5574;InbreedingCoeff=0.1497;MQ=46.17;MQ0=18;MQRankSum=0.578;QD=6.21;ReadPosRankSum=1.165;VQSLOD=3.1165;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:77.80:0,78,797	0/1:10,0:10:3.75:4,0,45	0/0:24,0:9:24.02:0,24,255	0/0:28,0:11:26.88:0,27,262	0/0:16,0:16:16.79:0,17,142	0/0:21,0:21:56.99:0,57,665	0/0:40,0:40:91.60:0,92,994	0/1:25,2:19:7.92:292,0,8	0/0:22,0:21:20.49:0,20,144	0/0:20,0:20:54.94:0,55,445	0/0:12,0:12:11.74:0,12,101	0/0:35,0:35:51.06:0,51,414	0/0:29,0:29:20.99:0,21,281	0/1:18,0:17:52.37:76,0,52	0/0:26,0:26:32.54:0,33,289	0/0:16,0:15:24.40:0,24,194	0/0:21,0:19:21.79:0,22,215	0/0:27,0:26:57.62:0,58,385	1/1:15,1:15:17.23:212,17,0	0/1:13,2:15:51.31:131,0,51	0/1:39,12:41:99:164,0,106	0/0:24,0:22:26.96:0,27,225	0/0:8,0:8:8.99:0,9,76	0/0:43,0:42:49.35:0,49,371	0/0:19,0:19:15.87:0,16,128	0/0:29,0:28:54.44:0,54,456	0/1:16,3:19:70.84:227,0,71	0/0:11,0:10:9.50:0,9,114
chr10	47351075	.	ACG	A	506.90	PASS	AB=0.965;AC=15;AF=0.268;AN=56;BaseQRankSum=-2.533;DP=661;FS=12.328;HRun=0;HaplotypeScore=187.7429;InbreedingCoeff=-0.2242;MQ=45.84;MQ0=20;MQRankSum=-3.327;QD=1.59;ReadPosRankSum=0.074;VQSLOD=2.0201;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:5.88:0,6,841	0/1:11,1:12:0.29:0,0,90	0/0:15,0:5:14.34:0,14,89	0/0:23,0:8:1.34:0,1,72	0/1:21,0:21:24.58:25,0,150	0/0:26,0:26:10.49:0,10,692	0/0:34,0:34:29.19:0,29,827	0/0:24,0:16:18.65:0,19,247	0/1:21,1:21:90.60:91,0,154	0/0:25,0:25:42.18:0,42,489	1/1:13,0:13:3.59:46,4,0	0/1:33,1:34:99:125,0,175	0/1:26,1:27:99:124,0,172	0/0:23,0:22:0.59:0,1,138	0/1:23,3:26:60.44:60,0,214	0/1:17,0:16:47.92:48,0,162	0/1:23,1:22:6.10:6,0,227	0/0:27,0:26:7.25:0,7,296	0/1:11,0:10:2.23:2,0,61	0/1:17,0:17:1.27:1,0,123	0/0:51,0:40:42.62:0,43,337	0/1:21,2:21:1.77:2,0,168	0/0:8,1:9:9.36:0,9,60	0/1:41,2:42:64.04:64,0,255	0/0:15,0:15:17.05:0,17,189	0/1:29,0:28:49.99:50,0,344	0/0:21,0:21:4.15:0,4,142	0/0:12,0:11:18.18:0,18,135
chr10	47351089	.	GCA	G	10560.55	PASS	AB=0.660;AC=50;AF=0.893;AN=56;BaseQRankSum=-0.351;DP=647;FS=0.000;HRun=0;HaplotypeScore=145.2041;InbreedingCoeff=0.5156;MQ=51.01;MQ0=16;MQRankSum=0.122;QD=17.48;ReadPosRankSum=5.636;VQSLOD=4.7561;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:15,22:38:50.99:609,51,0	1/1:2,8:10:15.05:186,15,0	0/0:22,1:15:41.45:0,41,602	0/0:20,0:11:33.11:0,33,510	1/1:7,15:22:28.99:341,29,0	1/1:5,22:28:40.12:663,40,0	1/1:7,19:27:21.98:474,22,0	1/1:10,14:18:44.79:498,45,0	1/1:10,9:18:18.05:223,18,0	1/1:11,21:32:34.25:734,34,0	1/1:9,4:13:8.96:112,9,0	1/1:18,11:29:10.62:326,11,0	1/1:12,14:26:13.29:349,13,0	1/1:5,18:23:50.90:607,51,0	1/1:8,12:20:32.13:378,32,0	1/1:3,13:15:6.98:243,7,0	1/1:10,16:24:45.14:553,45,0	0/1:10,13:24:61.61:362,0,62	1/1:2,11:13:29.98:335,30,0	1/1:2,11:13:30.09:372,30,0	1/1:8,45:45:69.22:854,69,0	1/1:13,11:22:6.99:209,7,0	1/1:2,9:12:11.86:149,12,0	1/1:14,22:36:41.83:497,42,0	0/1:9,7:16:6.60:236,0,7	1/1:14,11:23:5.94:418,6,0	1/1:2,17:19:48.15:593,48,0	1/1:3,9:11:5.14:241,5,0
chr10	47351091	.	A	ACG	2075.98	PASS	AB=0.979;AC=23;AF=0.411;AN=56;BaseQRankSum=1.314;DP=647;FS=29.388;HRun=0;HaplotypeScore=173.2780;InbreedingCoeff=-0.1348;MQ=51.47;MQ0=15;MQRankSum=1.542;QD=5.00;ReadPosRankSum=0.301;VQSLOD=1.1216;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:34.48:0,34,372	0/1:10,0:10:26.50:27,0,32	0/0:24,0:16:44.32:0,44,594	0/0:20,0:11:33.11:0,33,479	0/1:22,1:22:28.86:85,0,29	0/0:28,0:28:53.54:0,54,341	0/0:26,0:26:27.60:0,28,257	0/1:25,0:19:65.52:118,0,66	0/0:19,0:18:10.09:0,10,80	0/1:32,0:33:12.61:246,0,13	0/1:13,0:13:23.49:73,0,23	0/1:29,0:28:16.32:16,0,135	0/1:25,1:26:38.64:39,0,102	0/1:23,0:23:39.79:59,0,40	0/1:19,1:20:78.78:79,0,101	0/0:16,0:15:22.57:0,23,112	1/1:23,2:23:19.37:282,19,0	0/1:23,1:23:92.07:232,0,92	0/1:14,0:14:32.41:32,0,58	1/1:14,0:14:7.13:73,7,0	1/1:52,0:45:15.49:247,15,0	0/0:23,0:21:20.09:0,20,103	0/1:11,0:12:25.57:26,0,33	0/0:37,0:36:2.93:0,3,153	1/1:16,0:16:5.35:152,5,0	0/1:23,0:22:59.07:271,0,59	0/1:20,0:20:27.25:105,0,27	0/1:11,1:11:3.11:89,0,3
chr10	47353773	.	A	ATG	7984.73	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-4.994;DP=1063;FS=8.453;HRun=0;HaplotypeScore=203.6740;InbreedingCoeff=0.9978;MQ=56.62;MQ0=7;MQRankSum=-1.417;QD=31.19;ReadPosRankSum=4.197;VQSLOD=5.7641;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:61,0:60:99:0,147,2027	0/0:11,0:11:30.10:0,30,428	0/0:56,0:22:58.41:0,58,732	0/0:49,0:29:74.98:0,75,981	1/1:7,29:36:18.90:711,19,0	0/0:27,0:27:80.71:0,81,1063	0/0:37,0:37:93.29:0,93,1303	0/0:47,0:47:47.64:0,48,585	0/0:38,0:38:99:0,105,1481	1/1:8,52:60:99:2454,140,0	1/1:2,17:20:33.09:545,33,0	0/0:41,0:41:99:0,108,1507	0/0:38,0:38:99:0,105,1488	0/0:42,0:42:99:0,119,886	0/0:44,0:44:99:0,117,1628	0/0:35,0:35:99:0,102,1415	1/1:6,19:26:46.36:743,46,0	1/1:2,22:25:45.56:714,46,0	0/0:32,0:25:25.57:0,26,256	0/0:30,0:30:71.22:0,71,505	0/0:65,0:61:99:0,107,898	0/0:37,0:37:99:0,105,1463	0/0:40,0:40:99:0,102,1398	0/0:41,0:41:93.53:0,94,1285	1/1:6,19:25:20.80:581,21,0	1/1:4,40:46:99:1643,106,0	0/0:36,0:36:76.95:0,77,633	1/1:4,14:18:35.60:593,36,0
chr10	47353775	.	GTA	G	563.18	PASS	AB=0.986;AC=13;AF=0.232;AN=56;BaseQRankSum=0.924;DP=1053;FS=0.476;HRun=0;HaplotypeScore=225.6856;InbreedingCoeff=-0.0691;MQ=56.71;MQ0=7;MQRankSum=0.744;QD=1.43;ReadPosRankSum=-6.420;VQSLOD=0.5967;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:60,0:59:99:0,147,2616	0/0:12,0:12:33.10:0,33,603	0/0:56,0:21:59.94:0,60,971	0/0:51,0:31:82.66:0,83,1262	0/1:33,2:35:38.45:43,0,38	0/0:27,0:27:80.30:0,80,1495	0/0:35,0:35:96.29:0,96,1729	0/1:46,0:46:94.72:95,0,618	0/0:37,0:37:99:0,108,1985	1/1:61,1:62:18.81:311,19,0	0/1:20,0:20:7.21:11,0,7	0/0:42,0:42:99:0,108,1971	0/0:38,0:38:99:0,114,1944	0/0:42,0:42:99:0,111,1030	0/0:44,0:44:99:0,123,2128	0/0:35,0:35:99:0,105,1811	0/1:25,0:25:11.96:12,0,49	0/1:25,1:26:12.23:16,0,12	0/1:29,0:24:47.30:47,0,254	0/1:27,1:28:16.88:17,0,503	0/0:63,0:59:1.08:0,1,965	0/0:37,0:37:99:0,111,1984	0/0:39,0:39:99:0,108,1914	0/0:40,0:40:83.98:0,84,1689	0/1:25,0:25:11.74:12,0,13	0/1:45,0:45:20.16:124,0,20	0/1:35,1:36:10.50:10,0,653	0/1:17,0:17:20.67:21,0,33
chr10	47354436	.	T	TATCTGGTGA	55036.02	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-7.494;DP=684;FS=2.669;HRun=0;HaplotypeScore=161.7874;InbreedingCoeff=0.9948;MQ=68.04;MQ0=0;MQRankSum=-15.610;QD=100.98;ReadPosRankSum=2.394;VQSLOD=5.5015;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,141,3761	1/1:5,12:20:42.14:1960,42,0	0/0:19,0:20:51.76:0,52,1184	0/0:15,0:15:42.01:0,42,985	1/1:1,28:41:66.44:2819,66,0	0/0:29,0:29:81.26:0,81,2401	0/0:27,0:27:69.19:0,69,1864	1/1:13,12:41:99:4846,117,0	1/1:3,13:22:48.12:2191,48,0	1/1:5,14:31:81.17:3440,81,0	1/1:5,12:23:39.05:1567,39,0	1/1:1,13:20:42.14:2024,42,0	1/1:5,12:22:51.18:2392,51,0	1/1:5,16:24:57.20:2723,57,0	1/1:2,12:17:42.14:1986,42,0	1/1:3,10:18:39.13:1817,39,0	1/1:3,11:20:39.10:1857,39,0	1/1:2,6:14:24.08:1132,24,0	1/1:6,9:22:63.22:2770,63,0	1/1:6,25:37:84.25:3824,84,0	1/1:5,6:17:24.04:973,24,0	1/1:7,15:28:54.19:2579,54,0	1/1:4,11:22:43.04:1874,43,0	1/1:3,6:10:24.08:1019,24,0	1/1:4,12:20:48.16:2283,48,0	1/1:6,25:40:99:4855,111,0	1/1:4,21:29:72.25:3480,72,0	1/1:1,4:7:15.05:625,15,0
chr10	47355764	.	TA	T	703.14	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.291;DP=743;FS=2.214;HRun=9;HaplotypeScore=81.9548;InbreedingCoeff=0.8833;MQ=81.11;MQ0=0;MQRankSum=-3.599;QD=18.03;ReadPosRankSum=0.890;VQSLOD=3.9472;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,123,1393	1/1:2,11:13:27.01:247,27,0	0/0:22,0:21:48.02:0,48,522	0/0:18,0:18:0.38:0,0,309	0/0:32,0:32:87.25:0,87,995	0/0:25,0:25:66.20:0,66,762	0/0:30,0:30:87.19:0,87,958	0/0:37,0:37:93.26:0,93,1058	0/0:25,2:27:47.76:0,48,803	0/0:29,0:29:69.20:0,69,795	0/0:25,0:25:72.20:0,72,821	0/0:27,0:27:66.12:0,66,737	0/0:19,0:19:48.14:0,48,554	0/0:26,0:26:78.20:0,78,876	1/1:2,24:26:63.03:577,63,0	0/0:39,0:39:99:0,105,1204	0/0:21,0:21:57.16:0,57,647	0/0:13,0:13:39.12:0,39,450	0/0:20,0:20:51.15:0,51,589	0/0:31,0:33:89.89:0,90,984	0/0:44,0:44:99:0,126,1436	0/0:32,0:32:93.22:0,93,1048	0/0:20,0:20:57.15:0,57,635	0/0:32,0:32:90.27:0,90,1039	0/0:17,0:17:45.13:0,45,519	0/0:35,0:35:84.25:0,84,963	0/0:23,0:23:57.17:0,57,657	0/0:12,0:12:33.10:0,33,381
chr10	47357211	.	T	TA	8349.84	PASS	AB=0.599;AC=38;AF=0.679;AN=56;BaseQRankSum=-8.621;DP=623;FS=5.580;HRun=12;HaplotypeScore=69.0280;InbreedingCoeff=0.3429;MQ=73.62;MQ0=0;MQRankSum=-0.198;QD=16.06;ReadPosRankSum=2.248;VQSLOD=6.0703;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:86.23:0,86,620	1/1:1,3:4:8.93:75,9,0	0/0:15,0:13:7.92:0,8,97	0/0:8,0:8:5.90:0,6,42	0/1:8,13:24:27.88:274,0,28	0/0:16,1:18:11.63:0,12,239	0/0:26,0:27:64.49:0,64,455	1/1:7,27:34:13.28:636,13,0	1/1:3,22:25:29.17:445,29,0	1/1:14,20:35:25.14:542,25,0	1/1:4,9:14:10.93:245,11,0	1/1:7,26:33:48.36:610,48,0	1/1:5,21:26:13.28:452,13,0	0/1:8,7:15:7.80:239,0,8	0/1:3,9:12:0.88:154,0,1	1/1:1,6:7:9.01:88,9,0	0/1:6,22:29:34.35:494,0,34	0/1:7,15:22:0.25:308,0,0	1/1:6,21:28:20.86:533,21,0	1/1:8,20:29:49.92:451,50,0	1/1:7,16:23:23.23:387,23,0	1/1:7,15:23:33.96:348,34,0	1/1:5,17:22:33.94:323,34,0	0/1:5,19:24:14.63:358,0,15	1/1:4,15:19:5.13:212,5,0	1/1:6,28:36:83.54:749,84,0	0/1:9,19:29:52.63:326,0,53	0/1:3,4:7:6.88:102,0,7
chr10	47357363	.	C	CA	7334.08	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-13.957;DP=703;FS=0.694;HRun=1;HaplotypeScore=71.4166;InbreedingCoeff=0.9807;MQ=90.06;MQ0=0;MQRankSum=-2.530;QD=44.18;ReadPosRankSum=2.962;VQSLOD=4.7594;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,132,1795	0/0:12,0:12:36.12:0,36,500	0/0:36,0:36:71.20:0,71,1185	0/0:25,0:23:64.47:0,64,807	0/0:19,0:19:57.13:0,57,712	0/0:24,0:24:69.17:0,69,923	0/0:32,0:32:96.30:0,96,1314	0/0:32,0:32:87.19:0,87,1177	1/1:1,26:27:75.26:1199,75,0	0/0:23,0:23:69.20:0,69,940	0/0:19,0:19:57.19:0,57,790	1/1:0,32:32:93.32:1484,93,0	1/1:1,21:22:54.18:863,54,0	0/0:17,0:17:51.17:0,51,712	0/0:23,0:23:69.23:0,69,955	1/1:0,8:8:24.08:384,24,0	0/0:25,0:25:75.25:0,75,1045	0/0:32,0:32:96.32:0,96,1340	0/0:21,0:21:54.18:0,54,753	0/0:21,0:21:60.20:0,60,837	0/0:54,0:54:99:0,163,2229	1/1:0,22:22:66.23:1055,66,0	1/1:0,20:20:51.14:815,51,0	1/1:0,35:35:96.33:1534,96,0	0/0:18,0:18:48.16:0,48,670	0/0:29,0:29:87.29:0,87,1214	0/0:27,0:27:81.27:0,81,1130	0/0:2,0:2:6.02:0,6,84
chr10	47359209	.	G	GA	3608.90	PASS	AB=0.805;AC=19;AF=0.339;AN=56;BaseQRankSum=-9.257;DP=639;FS=17.216;HRun=11;HaplotypeScore=77.4708;InbreedingCoeff=0.7121;MQ=78.02;MQ0=0;MQRankSum=0.828;QD=17.19;ReadPosRankSum=2.330;VQSLOD=3.0670;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:38,2:41:48.93:0,49,736	1/1:3,6:9:15.03:152,15,0	0/0:22,0:20:12.65:0,13,146	0/0:23,0:18:1.55:0,2,102	0/0:38,0:39:85.66:0,86,656	0/0:19,0:22:51.86:0,52,383	0/0:17,0:19:10.43:0,10,254	0/0:32,0:32:59.69:0,60,463	1/1:2,19:22:56.95:562,57,0	0/0:31,1:33:37.29:0,37,460	0/1:14,2:17:25.99:26,0,180	1/1:3,15:20:38.52:363,39,0	1/1:3,15:18:39.08:394,39,0	0/0:15,0:15:8.85:0,9,206	1/1:4,20:24:30.87:494,31,0	1/1:3,22:28:41.66:608,42,0	0/0:20,0:20:56.78:0,57,441	0/0:27,0:27:59.61:0,60,455	0/0:24,0:28:39.58:0,40,396	0/0:20,0:21:42.90:0,43,314	0/1:16,2:20:14.95:15,0,244	1/1:5,9:14:24.05:244,24,0	0/1:8,14:22:27.62:293,0,28	1/1:1,15:16:45.09:457,45,0	0/0:31,2:33:44.25:0,44,527	0/0:14,0:15:34.91:0,35,261	0/0:25,1:26:23.62:0,24,365	0/0:12,0:12:29.83:0,30,227
chr10	47362318	.	CA	C	3147.41	PASS	AB=1.000;AC=26;AF=0.464;AN=56;BaseQRankSum=18.015;DP=735;FS=0.000;HRun=1;HaplotypeScore=115.4683;InbreedingCoeff=0.8306;MQ=76.88;MQ0=1;MQRankSum=-0.647;QD=8.92;ReadPosRankSum=1.895;VQSLOD=1.1431;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,105,1556	0/0:16,0:16:48.16:0,48,750	0/0:20,0:20:53.41:0,53,733	0/0:33,0:32:93.22:0,93,1347	1/1:19,1:19:36.72:209,37,0	0/0:16,0:16:45.15:0,45,697	0/0:38,0:38:99:0,105,1472	0/1:28,0:28:37.94:134,0,38	0/0:32,0:32:93.26:0,93,1393	1/1:34,1:35:50.56:295,51,0	1/1:14,1:13:5.33:119,5,0	0/0:30,0:30:84.27:0,84,1261	0/0:29,0:29:84.28:0,84,1287	1/1:25,0:25:66.41:331,66,0	0/0:33,0:33:93.30:0,93,1418	0/0:32,0:32:93.32:0,93,1449	1/1:34,1:33:11.74:303,12,0	1/1:22,1:23:51.66:238,52,0	0/1:14,0:13:50.53:59,0,51	1/1:22,1:23:33.41:237,33,0	1/1:52,0:52:99:535,126,0	0/0:19,0:19:48.14:0,48,708	0/0:13,0:13:30.10:0,30,456	0/0:36,0:36:99:0,105,1590	1/1:19,0:17:33.30:147,33,0	1/1:25,1:26:17.14:241,17,0	1/1:25,1:26:70.60:400,71,0	1/1:12,0:11:13.25:121,13,0
chr10	47362319	.	AC	A	10323.50	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=12.980;DP=728;FS=0.900;HRun=4;HaplotypeScore=90.8370;InbreedingCoeff=0.9912;MQ=77.61;MQ0=1;MQRankSum=-2.129;QD=29.75;ReadPosRankSum=0.279;VQSLOD=4.5441;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,99,1362	0/0:16,0:16:48.16:0,48,672	0/0:21,0:22:9:0,9,490	0/0:31,1:31:72.06:0,72,966	1/1:1,19:19:39.11:465,39,0	0/0:16,0:16:48.15:0,48,656	0/0:36,0:36:90.28:0,90,1239	1/1:2,24:26:72.17:835,72,0	0/0:32,0:32:93.30:0,93,1285	1/1:2,31:33:93.24:1085,93,0	1/1:1,13:12:21.06:250,21,0	0/0:32,0:32:87.27:0,87,1185	0/0:29,0:29:84.28:0,84,1175	1/1:0,25:25:72.22:863,72,0	0/0:32,0:32:93.29:0,93,1261	0/0:32,0:32:93.29:0,93,1270	1/1:5,31:35:44.21:931,44,0	1/1:1,21:22:57.17:684,57,0	1/1:4,10:13:30.07:346,30,0	1/1:3,20:23:33.30:624,33,0	1/1:1,51:52:99:1675,141,0	0/0:19,0:19:48.15:0,48,652	0/0:13,0:13:33.04:0,33,404	0/0:36,0:36:99:0,105,1448	1/1:0,19:17:39.08:452,39,0	1/1:2,23:25:72.22:862,72,0	1/1:2,25:27:75.23:892,75,0	1/1:1,10:11:30.09:360,30,0
chr10	47362876	.	CA	C	1708.25	PASS	AB=0.523;AC=41;AF=0.932;AN=44;DP=447;FS=0.000;HRun=2;HaplotypeScore=38.8165;InbreedingCoeff=0.2092;MQ=18.54;MQ0=95;QD=4.40;VQSLOD=0.3664;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,14:7:9.03:114,9,0	./.	./.	./.	1/1:3,20:16:11.79:137,12,0	1/1:3,12:8:3.01:39,3,0	1/1:2,16:5:6.02:76,6,0	1/1:3,4:3:9.03:114,9,0	1/1:2,14:7:3:29,3,0	1/1:6,20:12:15.05:190,15,0	1/1:4,11:7:3.01:39,3,0	0/1:3,22:5:0:0,0,0	1/1:3,19:9:9.03:114,9,0	./.	0/1:2,25:5:0:0,0,0	1/1:2,20:6:8.89:115,9,0	1/1:0,17:6:3.01:39,3,0	1/1:2,12:5:3.90:40,4,0	1/1:3,3:3:9.02:102,9,0	./.	./.	1/1:4,15:11:14.91:188,15,0	1/1:1,7:4:9.02:102,9,0	1/1:1,16:5:8.98:82,9,0	1/1:4,20:7:8.98:86,9,0	1/1:2,18:4:5.99:61,6,0	0/1:1,14:4:0:0,0,0	1/1:4,12:9:9.03:116,9,0
chr10	47362943	.	A	AC	6275.19	PASS	AC=46;AF=0.885;AN=52;BaseQRankSum=-2.128;DP=390;FS=6.490;HRun=1;HaplotypeScore=46.9544;InbreedingCoeff=0.6008;MQ=38.31;MQ0=42;MQRankSum=-0.912;QD=18.08;ReadPosRankSum=3.569;VQSLOD=5.0764;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,17:13:21:304,21,0	./.	0/0:10,1:1:3:0,3,25	0/0:15,0:4:11.70:0,12,107	1/1:0,3:1:3.01:48,3,0	1/1:0,9:5:12.04:192,12,0	./.	0/0:2,0:1:2.99:0,3,24	1/1:0,22:15:27.09:430,27,0	1/1:0,17:17:42.08:641,42,0	1/1:0,4:3:9.03:143,9,0	1/1:1,27:17:24.08:382,24,0	1/1:0,26:16:33.58:527,34,0	1/1:0,25:13:27.09:431,27,0	1/1:0,13:7:12.04:192,12,0	1/1:0,12:6:6.02:96,6,0	1/1:0,22:12:18.06:284,18,0	1/1:0,16:12:27.07:406,27,0	1/1:0,8:6:15.05:240,15,0	1/1:0,6:4:6.02:96,6,0	1/1:4,30:21:32.56:567,33,0	1/1:1,11:7:12.04:191,12,0	1/1:0,3:3:9.03:144,9,0	1/1:0,14:6:4.26:50,4,0	1/1:0,10:8:21.07:335,21,0	1/1:2,11:5:15.05:240,15,0	1/1:0,17:9:12.93:193,13,0	1/1:0,11:6:9.03:143,9,0
chr10	47363001	.	A	AC	1485.59	PASS	AC=30;AF=1.000;AN=30;BaseQRankSum=-1.636;DP=120;FS=4.102;HRun=2;HaplotypeScore=37.4843;InbreedingCoeff=-0.1248;MQ=24.29;MQ0=13;MQRankSum=-0.674;QD=16.69;ReadPosRankSum=1.444;VQSLOD=3.7833;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	./.	1/1:1,1:2:6.02:91,6,0	./.	1/1:0,2:2:6.02:96,6,0	1/1:0,8:7:18.06:275,18,0	1/1:1,2:1:3:27,3,0	./.	1/1:6,9:12:18.06:275,18,0	1/1:1,10:8:15.05:239,15,0	1/1:0,3:3:6.02:83,6,0	./.	1/1:3,5:4:6.02:83,6,0	./.	./.	./.	1/1:2,1:3:2.91:35,3,0	1/1:4,10:6:3.93:81,4,0	1/1:2,2:2:3.01:36,3,0	./.	1/1:1,6:4:3.01:48,3,0	./.	1/1:2,4:1:3.01:48,3,0	1/1:0,1:1:3.01:48,3,0	1/1:0,2:2:6.02:96,6,0
chr10	47363018	.	A	AC	3152.29	PASS	AB=1.000;AC=43;AF=0.977;AN=44;BaseQRankSum=-1.254;DP=189;FS=0.000;HRun=2;HaplotypeScore=46.8100;InbreedingCoeff=-0.0750;MQ=41.89;MQ0=19;MQRankSum=0.480;QD=17.91;ReadPosRankSum=2.668;VQSLOD=3.7431;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,8:4:6:70,6,0	1/1:0,4:4:11.91:150,12,0	0/1:2,0:2:12.60:13,0,20	./.	1/1:1,4:4:6.02:96,6,0	1/1:0,8:6:9.03:143,9,0	./.	./.	1/1:1,3:4:12.03:168,12,0	1/1:1,4:4:9.01:119,9,0	./.	1/1:5,17:16:30.10:475,30,0	1/1:2,13:11:18.06:285,18,0	1/1:0,4:3:9.03:139,9,0	1/1:1,6:3:6.02:94,6,0	1/1:0,9:5:12.04:190,12,0	1/1:2,10:9:17.18:284,17,0	1/1:1,9:4:4.26:41,4,0	./.	1/1:0,5:5:3.01:47,3,0	1/1:2,13:9:6.89:139,7,0	1/1:1,4:2:3.01:48,3,0	./.	1/1:1,8:5:6.02:93,6,0	1/1:2,9:11:21.07:323,21,0	1/1:1,4:2:6.02:85,6,0	1/1:0,2:1:3.01:46,3,0	1/1:0,7:7:12.04:191,12,0
chr10	47363189	.	T	TGC	1485.08	PASS	AB=0.823;AC=18;AF=0.321;AN=56;BaseQRankSum=5.913;DP=769;FS=0.656;HRun=0;HaplotypeScore=114.1583;InbreedingCoeff=-0.4709;MQ=47.17;MQ0=93;MQRankSum=-6.467;QD=3.29;ReadPosRankSum=0.812;VQSLOD=2.3811;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:31,9:29:12.48:12,0,634	0/1:2,4:5:51.51:52,0,89	0/0:36,0:5:9:0,9,118	0/1:36,1:6:13.35:13,0,86	0/0:15,3:14:18.06:0,18,292	0/1:18,5:19:9.36:9,0,717	0/0:21,1:18:39.13:0,39,635	0/0:19,0:14:36.12:0,36,566	0/0:14,5:13:30.10:0,30,488	0/0:42,2:34:26.38:0,26,1236	0/1:20,1:19:24.72:25,0,431	0/1:21,4:20:60.67:61,0,712	0/1:12,4:12:88.55:89,0,328	0/1:17,4:13:33.43:33,0,359	0/1:7,19:17:99:504,0,140	0/0:24,3:19:54.18:0,54,877	0/1:37,8:43:99:232,0,1516	0/1:29,4:27:97.35:97,0,874	0/1:16,2:11:30.57:31,0,400	0/1:16,3:12:27.81:28,0,452	0/0:58,9:58:78.25:0,78,2020	0/1:12,5:12:99:152,0,259	0/1:7,7:11:42.32:42,0,226	0/1:30,7:34:84.15:84,0,1183	0/1:30,2:28:99:104,0,578	0/0:39,3:25:65:0,65,983	0/1:18,4:15:76.23:76,0,509	0/0:22,1:21:22.15:0,22,615
chr10	47365858	.	CTCTTCTTCTTCTTCT	C	144.63	PASS	AC=4;AF=0.080;AN=50;BaseQRankSum=0.171;DP=737;FS=0.000;HRun=0;HaplotypeScore=270.0377;InbreedingCoeff=0.6924;MQ=59.37;MQ0=28;MQRankSum=0.263;QD=2.63;ReadPosRankSum=1.212;VQSLOD=2.2109;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:26:6.02:119,6,0	0/0:17,0:16:24.08:0,24,983	./.	./.	0/0:34,0:39:20.91:0,21,266	1/1:17,10:27:3.01:122,3,0	./.	0/0:32,0:27:0:0,0,0	0/0:25,0:25:24.08:0,24,1273	0/0:24,0:23:22.32:0,22,640	0/0:19,0:19:9.03:0,9,261	0/0:27,0:27:19.62:0,20,908	0/0:27,0:27:43.36:0,43,1969	0/0:21,0:22:9.03:0,9,502	0/0:19,0:18:15.05:0,15,653	0/0:26,0:26:30.10:0,30,1414	0/0:14,0:17:15.05:0,15,586	0/0:27,0:27:15.05:0,15,407	0/0:20,0:20:12.04:0,12,548	0/0:27,0:30:30.10:0,30,1382	0/0:21,0:19:10.85:0,11,465	0/0:24,0:24:18.06:0,18,860	0/0:21,0:21:27.09:0,27,708	0/0:39,0:38:22.63:0,23,969	0/0:23,0:24:33.11:0,33,783	0/0:34,0:33:39.07:0,39,1719	0/0:24,0:23:33.11:0,33,1039	0/0:31,0:31:39.12:0,39,2057
chr10	47365931	.	T	TCTC	1907.12	PASS	AB=0.994;AC=17;AF=0.304;AN=56;BaseQRankSum=2.780;DP=539;FS=8.702;HRun=0;HaplotypeScore=94.3158;InbreedingCoeff=0.5535;MQ=52.57;MQ0=44;MQRankSum=1.823;QD=8.55;ReadPosRankSum=-0.061;VQSLOD=2.1116;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:32.76:0,33,249	0/1:10,0:9:8.53:9,0,57	0/0:68,0:19:44.04:0,44,434	0/1:65,0:19:12.33:12,0,252	0/0:16,0:16:33.33:0,33,273	0/0:22,0:18:23.89:0,24,195	0/0:18,0:17:38.90:0,39,321	0/0:29,0:21:59.86:0,60,519	0/1:16,0:16:6.42:189,0,6	0/0:17,0:13:35.28:0,35,333	0/0:4,0:4:12.01:0,12,114	1/1:10,2:12:26.85:330,27,0	1/1:16,3:18:47.59:576,48,0	0/1:11,0:10:25.30:25,0,130	0/0:13,0:11:5.66:0,6,180	1/1:16,0:16:33.43:290,33,0	0/0:9,0:9:23.73:0,24,216	0/0:11,0:11:6.13:0,6,156	0/0:11,0:9:21.03:0,21,216	0/0:15,0:14:14.17:0,14,205	0/1:8,0:8:10.78:11,0,78	1/1:25,0:23:14.11:268,14,0	1/1:16,0:16:31.04:235,31,0	1/1:7,15:21:8.95:152,9,0	0/0:12,0:12:32.72:0,33,275	0/0:24,0:22:12.20:0,12,362	0/0:17,0:15:24.18:0,24,258	0/0:15,0:15:11.65:0,12,431
chr10	47365987	.	CTCTCTCTCTGTGTGTGTG	C	2899.06	PASS	AB=1.000;AC=21;AF=0.389;AN=54;BaseQRankSum=3.671;DP=460;FS=0.637;HRun=0;HaplotypeScore=193.9369;InbreedingCoeff=0.0993;MQ=37.80;MQ0=27;MQRankSum=-3.684;QD=10.70;ReadPosRankSum=-0.482;VQSLOD=2.5659;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:19:30.55:0,31,1428	0/1:5,0:5:48.31:48,0,215	./.	0/0:12,0:6:14.98:0,15,290	0/0:12,0:12:3.48:0,3,76	0/0:22,0:20:27.97:0,28,960	0/0:19,0:17:25.02:0,25,681	0/0:15,0:8:12.49:0,12,180	1/1:19,0:17:8:236,8,0	0/1:24,0:23:99:353,0,1032	0/0:14,0:13:7.43:0,7,218	1/1:23,0:22:5.10:223,5,0	1/1:23,0:22:32.90:796,33,0	0/1:16,0:16:90.90:91,0,230	0/0:13,0:13:9.97:0,10,175	1/1:16,0:16:10.69:319,11,0	0/1:11,0:10:64.96:65,0,171	0/0:12,0:10:27.09:0,27,790	0/1:13,0:12:48.02:48,0,311	0/1:15,0:15:99:154,0,455	0/0:18,0:15:12.03:0,12,319	1/1:8,22:30:2.83:142,3,0	0/0:8,8:15:0.20:0,0,1	1/1:17,1:18:0.03:85,0,0	0/0:11,0:9:3:0,3,25	0/1:28,0:28:99:223,0,1412	0/1:21,0:21:99:156,0,1100	0/1:9,0:8:99:125,0,183
chr10	47365995	.	CTGTGTGTGTG	C	2959.23	PASS	AB=0.801;AC=30;AF=0.625;AN=48;BaseQRankSum=3.603;DP=441;FS=0.000;HRun=0;HaplotypeScore=161.5611;InbreedingCoeff=0.4202;MQ=39.05;MQ0=24;MQRankSum=-4.816;QD=10.28;ReadPosRankSum=1.325;VQSLOD=2.1528;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:20:24.07:0,24,841	0/1:5,0:5:14.66:15,0,178	./.	./.	0/1:4,1:12:0.02:0,0,0	0/0:26,0:24:33.09:0,33,658	0/0:17,0:16:6.01:0,6,60	./.	1/1:11,7:18:4.80:169,5,0	1/1:15,0:21:24.08:561,24,0	0/0:8,0:11:1.41:0,1,2	1/1:18,5:22:0.58:81,1,0	1/1:16,7:22:14.91:386,15,0	1/1:12,1:14:5.42:178,5,0	0/0:14,0:14:12.51:0,13,241	1/1:8,9:17:8.56:249,9,0	1/1:6,0:12:2.80:75,3,0	./.	1/1:11,2:12:5.75:153,6,0	1/1:12,2:14:8.68:241,9,0	0/0:18,3:17:2.96:0,3,20	1/1:29,0:30:2.85:83,3,0	0/0:16,0:15:0.47:0,0,1	1/1:15,3:18:2.44:88,2,0	0/1:7,0:8:0:0,0,0	1/1:24,0:28:15.05:376,15,0	0/1:16,3:20:29.44:305,0,29	1/1:4,0:5:6.02:144,6,0
chr10	47367943	.	GT	G	4520.02	PASS	AB=1.000;AC=35;AF=0.625;AN=56;BaseQRankSum=13.636;DP=631;FS=0.679;HRun=11;HaplotypeScore=83.6493;InbreedingCoeff=0.8718;MQ=69.81;MQ0=0;MQRankSum=-1.089;QD=11.83;ReadPosRankSum=1.544;VQSLOD=4.7598;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,1:39:80.44:0,80,1030	1/1:3,13:16:38.93:320,39,0	0/1:14,0:12:6.60:7,0,110	0/0:12,0:11:1.33:0,1,81	0/0:25,1:28:74.80:0,75,749	1/1:5,18:23:47.93:394,48,0	1/1:6,23:29:56.92:468,57,0	1/1:10,26:37:25.14:553,25,0	1/1:1,0:18:32.59:96,33,0	0/0:35,1:36:68.53:0,69,907	0/0:24,2:26:22.83:0,23,627	1/1:2,0:15:24.44:72,24,0	1/1:0,0:18:32.59:96,33,0	1/1:5,22:27:53.93:443,54,0	1/1:3,21:24:59.92:493,60,0	1/1:2,0:16:26.95:79,27,0	0/0:28,0:29:69.86:0,70,721	0/0:21,1:22:32.48:0,32,541	1/1:7,11:18:6.72:248,7,0	1/1:4,18:22:51.72:412,52,0	1/1:1,8:11:25.04:184,25,0	1/1:4,0:21:26.46:78,26,0	1/1:4,0:31:42.46:125,42,0	1/1:1,0:18:20.37:60,20,0	0/0:19,1:22:32.16:0,32,510	0/0:22,0:22:60.10:0,60,620	1/1:5,19:24:47.92:394,48,0	0/0:11,1:12:5.43:0,5,263
chr10	47369625	.	T	TG	4401.46	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=0.434;DP=682;FS=0.000;HRun=6;HaplotypeScore=102.7903;InbreedingCoeff=0.9958;MQ=93.02;MQ0=0;MQRankSum=-3.007;QD=30.57;ReadPosRankSum=-0.155;VQSLOD=4.2116;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:56:99:0,162,1652	0/0:7,0:7:15.03:0,15,153	0/0:32,0:32:83.29:0,83,784	0/0:28,0:28:66.52:0,67,641	0/0:19,0:19:48.08:0,48,475	0/0:25,0:25:69.15:0,69,704	0/0:29,0:29:78.18:0,78,796	1/1:8,15:23:45.13:553,45,0	0/0:31,0:31:87.18:0,87,881	0/0:23,0:22:60.13:0,60,612	0/0:12,0:12:30.07:0,30,306	0/0:25,0:25:69.15:0,69,704	0/0:16,0:16:45.09:0,45,452	1/1:0,29:29:84.27:1056,84,0	0/0:30,0:30:84.19:0,84,857	0/0:29,0:29:75.15:0,75,759	0/0:29,0:29:84.19:0,84,857	0/0:19,0:19:57.13:0,57,581	1/1:4,11:15:33.11:415,33,0	1/1:3,17:20:45.14:566,45,0	1/1:1,29:30:75.24:943,75,0	0/0:25,0:25:63.12:0,63,635	0/0:16,0:16:48.06:0,48,473	0/0:30,0:30:90.21:0,90,918	0/0:22,0:22:54.12:0,54,550	0/0:27,0:27:66.14:0,66,673	1/1:4,22:27:69.22:868,69,0	0/0:8,0:8:21.04:0,21,214
chr10	47372267	.	G	GCAGA	1738.69	PASS	AB=0.818;AC=4;AF=0.071;AN=56;BaseQRankSum=-4.170;DP=732;FS=0.700;HRun=0;HaplotypeScore=125.0565;InbreedingCoeff=0.4308;MQ=59.82;MQ0=6;MQRankSum=-0.651;QD=25.20;ReadPosRankSum=1.116;VQSLOD=3.2094;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:41:84.26:0,84,1281	0/1:6,8:14:30.10:334,0,30	0/0:32,0:23:20.41:0,20,245	0/0:30,0:24:6.20:0,6,198	0/0:26,0:26:42.11:0,42,623	0/0:22,0:22:57.15:0,57,873	0/0:27,0:27:48.16:0,48,769	0/0:27,0:26:41.17:0,41,590	0/0:20,0:21:42.13:0,42,639	0/0:28,0:29:63.13:0,63,928	0/0:22,0:22:45.14:0,45,692	0/0:31,0:31:66.19:0,66,961	0/0:21,0:21:39.12:0,39,594	0/0:20,0:21:42.09:0,42,611	1/1:7,23:31:63.22:1501,63,0	0/0:19,0:20:39.13:0,39,605	0/0:31,0:32:60.84:0,61,1032	0/0:22,0:22:48.16:0,48,771	0/1:24,0:21:19.25:19,0,226	0/0:20,0:20:39.09:0,39,586	0/0:50,0:50:93.32:0,93,1487	0/0:20,0:20:36.12:0,36,573	0/0:21,0:22:33.10:0,33,506	0/0:44,0:43:89.92:0,90,1388	0/0:26,0:26:57.16:0,57,848	0/0:28,0:29:54.18:0,54,845	0/0:19,0:19:27.08:0,27,410	0/0:8,0:8:15.05:0,15,241
chr10	47372358	.	A	AAC	1869.73	PASS	AB=1.000;AC=35;AF=0.648;AN=54;BaseQRankSum=6.450;DP=471;FS=12.214;HRun=0;HaplotypeScore=120.5941;InbreedingCoeff=0.4526;MQ=63.26;MQ0=4;MQRankSum=-6.514;QD=5.75;ReadPosRankSum=-3.986;VQSLOD=1.4300;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:29:32.89:0,33,332	1/1:9,0:9:8.84:75,9,0	./.	0/0:29,0:23:2.99:0,3,25	1/1:13,0:13:8.99:76,9,0	0/0:7,0:7:2.92:0,3,34	0/0:33,0:33:29.88:0,30,413	1/1:27,0:27:19.10:131,19,0	0/0:10,0:10:8.51:0,9,44	1/1:18,0:19:41.88:371,42,0	1/1:4,0:5:2.98:22,3,0	0/1:21,0:21:15.03:44,0,15	0/1:12,0:12:17.04:30,0,17	1/1:13,0:13:2.98:22,3,0	1/1:21,0:21:22.76:174,23,0	1/1:21,0:18:11.21:67,11,0	1/1:12,0:12:21.03:238,21,0	1/1:13,0:13:9.01:99,9,0	1/1:19,0:19:14.89:109,15,0	0/1:8,0:7:0:0,0,0	1/1:26,0:26:2.99:24,3,0	0/0:9,0:9:5.36:0,5,36	0/1:6,0:6:5.40:5,0,17	0/1:33,0:32:34.51:35,0,126	0/0:6,5:12:8.84:0,9,72	1/1:25,0:25:38.85:368,39,0	1/1:16,0:15:10.49:79,10,0	1/1:3,0:3:8.98:75,9,0
chr10	47372381	.	A	ACACA	1861.87	PASS	AB=0.913;AC=32;AF=0.593;AN=54;BaseQRankSum=0.583;DP=490;FS=14.598;HRun=0;HaplotypeScore=135.9816;InbreedingCoeff=0.4698;MQ=43.88;MQ0=16;MQRankSum=-4.677;QD=5.82;ReadPosRankSum=-2.184;VQSLOD=1.1317;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:35:32.38:0,32,496	1/1:10,0:10:3.01:49,3,0	./.	0/0:6,0:2:3:0,3,26	1/1:10,0:9:3.22:73,3,0	0/0:11,0:11:3.21:0,3,49	0/0:34,0:33:41.86:0,42,617	1/1:28,0:26:12.09:143,12,0	0/0:11,0:11:8.74:0,9,112	1/1:30,0:27:33.46:536,33,0	1/1:7,0:6:3.01:66,3,0	0/0:25,0:25:7.13:0,7,118	0/0:16,0:16:7.09:0,7,75	1/1:15,0:14:2.90:35,3,0	1/1:24,0:24:12.19:215,12,0	1/1:25,0:22:8.79:52,9,0	1/1:11,0:11:14.79:290,15,0	0/1:6,6:12:18.89:62,0,19	1/1:24,0:22:6.28:80,6,0	0/1:8,0:7:0.10:0,0,0	1/1:26,0:22:2.70:24,3,0	0/0:11,0:11:5.31:0,5,99	0/1:13,0:13:6.32:6,0,51	0/1:38,0:35:6.17:6,0,360	0/0:17,0:17:8.84:0,9,101	1/1:21,0:20:14.79:244,15,0	1/1:13,0:12:2.44:6,2,0	1/1:4,0:4:6.02:144,6,0
chr10	47372402	.	AAGAGAG	A	56.32	PASS	AC=6;AF=0.115;AN=52;BaseQRankSum=1.662;DP=521;FS=4.324;HRun=0;HaplotypeScore=167.1667;InbreedingCoeff=0.4896;MQ=43.51;MQ0=18;MQRankSum=0.224;QD=0.95;ReadPosRankSum=-3.857;VQSLOD=1.7885;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:38:19.97:0,20,444	0/0:12,0:12:10.77:0,11,123	./.	./.	0/0:11,0:10:3.01:0,3,45	1/1:7,11:19:5.16:46,5,0	1/1:25,2:33:13.56:113,14,0	0/0:22,0:20:9.84:0,10,87	0/0:16,0:16:4.73:0,5,14	0/0:33,0:30:49.49:0,49,1087	1/1:6,0:5:0.47:1,0,0	0/0:27,0:27:23.72:0,24,422	0/0:13,0:13:3.01:0,3,48	0/0:20,0:19:11.69:0,12,217	0/0:29,0:29:7.66:0,8,170	0/0:21,0:18:7.23:0,7,302	0/0:14,0:13:7.27:0,7,102	0/0:16,0:14:17.64:0,18,237	0/0:21,0:20:24.55:0,25,510	0/0:11,0:10:0.47:0,0,2	0/0:25,0:19:9.03:0,9,209	0/0:16,0:15:17.88:0,18,279	0/0:17,0:18:1.57:0,2,67	0/0:36,0:33:32.63:0,33,751	0/0:19,0:19:1.45:0,1,75	0/0:16,0:15:24.37:0,24,451	0/0:16,0:15:21.12:0,21,512	0/0:10,0:9:18.50:0,19,246
chr10	47372441	.	A	AGC	67.18	PASS	AB=0.556;AC=2;AF=0.036;AN=56;BaseQRankSum=3.014;DP=676;FS=5.686;HRun=0;HaplotypeScore=132.7648;InbreedingCoeff=0.3495;MQ=67.54;MQ0=15;MQRankSum=1.446;QD=1.49;ReadPosRankSum=1.996;VQSLOD=1.5213;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:34:41.02:0,41,524	0/1:5,15:22:5.93:103,0,6	0/0:30,0:21:50.63:0,51,517	0/0:34,0:22:53.96:0,54,491	0/0:12,0:11:14.98:0,15,124	0/0:16,0:16:17.34:0,17,131	0/0:26,0:26:57.52:0,58,460	0/0:39,0:38:99:0,100,906	0/0:25,0:25:26.51:0,27,318	0/0:37,0:35:76.16:0,76,723	0/0:4,0:4:8.79:0,9,63	0/0:36,0:36:43.59:0,44,438	0/0:15,0:15:20.95:0,21,171	0/0:24,0:24:35.02:0,35,319	0/1:4,19:22:3.29:53,0,3	0/0:17,0:17:19.89:0,20,113	0/0:18,0:17:37.59:0,38,275	0/0:13,0:12:26.19:0,26,207	0/0:37,0:32:79.55:0,80,639	0/0:13,0:12:20.90:0,21,163	0/0:39,0:38:63.81:0,64,515	0/0:16,0:15:29.77:0,30,271	0/0:22,0:22:17.10:0,17,209	0/0:30,0:27:32.65:0,33,264	0/0:30,0:30:42.46:0,42,350	0/0:25,0:23:55.06:0,55,429	0/0:21,0:21:44.22:0,44,317	0/0:17,0:17:43.22:0,43,328
chr10	47376326	.	TTGTGTGTGTGTGTGTGTGTGTGTGTG	T	915.24	PASS	AC=2;AF=0.038;AN=52;BaseQRankSum=2.737;DP=517;FS=11.817;HRun=0;HaplotypeScore=279.5183;InbreedingCoeff=0.6019;MQ=72.21;MQ0=35;MQRankSum=-3.639;QD=35.20;ReadPosRankSum=-0.328;VQSLOD=1.0411;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:20:18.04:0,18,1284	0/0:4,0:4:3.01:0,3,52	./.	./.	0/0:10,0:14:24.08:0,24,1470	0/0:27,0:25:28.04:0,28,958	0/0:21,0:18:13.60:0,14,356	0/0:20,0:19:13.70:0,14,230	0/0:11,0:10:6.02:0,6,294	0/0:17,0:16:21.07:0,21,690	0/0:15,0:15:27.08:0,27,1125	0/0:15,0:13:18.04:0,18,957	0/0:17,0:16:19.88:0,20,1040	0/0:11,0:10:9.01:0,9,327	1/1:12,14:26:15.04:1003,15,0	0/0:15,0:13:18.06:0,18,1493	0/0:28,0:27:48.09:0,48,2363	0/0:9,0:8:22.32:0,22,1114	0/0:14,0:14:0:0,0,0	0/0:12,0:12:15.74:0,16,1065	0/0:23,0:22:24.08:0,24,1210	0/0:14,0:13:18.05:0,18,936	0/0:14,0:12:9.03:0,9,638	0/0:22,0:23:34.36:0,34,1975	0/0:13,0:13:12.04:0,12,772	0/0:21,0:19:23.28:0,23,939	0/0:29,0:27:24.53:0,25,991	0/0:8,0:7:9.03:0,9,604
chr10	47378068	.	A	AG	208.12	PASS	AB=0.963;AC=4;AF=0.071;AN=56;BaseQRankSum=0.924;DP=617;FS=41.749;HRun=0;HaplotypeScore=90.1603;InbreedingCoeff=0.4078;MQ=51.55;MQ0=32;MQRankSum=3.166;QD=2.89;ReadPosRankSum=1.177;VQSLOD=1.3353;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:81.51:0,82,530	1/1:4,9:14:7.89:73,8,0	0/0:37,0:9:11.58:0,12,116	0/1:33,0:7:5.82:6,0,19	0/0:30,0:30:53.41:0,53,395	0/0:18,0:17:49.96:0,50,390	0/0:17,0:17:30.65:0,31,224	0/0:48,0:42:99:0,101,596	0/0:13,0:12:31.68:0,32,180	0/0:22,0:21:54.22:0,54,362	0/0:17,0:17:41.85:0,42,339	0/0:8,0:7:12.20:0,12,68	0/0:14,0:14:26.54:0,27,166	0/0:9,0:8:16.90:0,17,83	0/1:23,2:24:32.98:230,0,33	0/0:13,0:13:38.56:0,39,301	0/0:32,0:31:65.71:0,66,420	0/0:30,0:26:62.91:0,63,432	0/0:23,0:20:51.25:0,51,309	0/0:25,0:23:61.17:0,61,376	0/0:9,0:8:18.61:0,19,111	0/0:17,0:16:34.14:0,34,215	0/0:19,0:18:29.82:0,30,263	0/0:19,0:19:12.29:0,12,77	0/0:26,0:25:58.67:0,59,441	0/0:19,0:19:53.38:0,53,372	0/0:24,0:19:50.11:0,50,288	0/0:23,0:20:52.95:0,53,383
chr10	47378956	.	CT	C	5385.26	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=10.469;DP=662;FS=1.544;HRun=2;HaplotypeScore=97.6335;InbreedingCoeff=0.9882;MQ=85.27;MQ0=0;MQRankSum=-5.142;QD=35.20;ReadPosRankSum=3.990;VQSLOD=5.0863;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,117,1709	0/0:16,0:16:45.15:0,45,668	0/0:18,0:18:54.03:0,54,731	0/0:27,0:27:77.84:0,78,1030	0/0:23,0:23:66.22:0,66,989	0/0:17,0:17:51.14:0,51,721	0/0:32,0:32:93.29:0,93,1371	0/0:27,0:27:78.25:0,78,1150	1/1:1,27:28:78.25:1010,78,0	0/0:25,0:25:75.25:0,75,1124	0/0:12,0:12:36.11:0,36,520	1/1:0,25:25:69.22:894,69,0	1/1:0,20:20:54.18:700,54,0	0/0:19,0:19:57.18:0,57,836	0/0:24,0:23:69.23:0,69,1033	0/0:16,0:16:48.15:0,48,699	0/0:29,0:29:87.29:0,87,1301	0/0:20,0:20:60.20:0,60,898	0/0:13,0:13:36.12:0,36,539	0/0:25,0:25:72.23:0,72,1052	0/0:34,0:34:99:0,99,1422	1/1:0,17:17:48.09:602,48,0	1/1:0,19:19:50.94:660,51,0	1/1:2,42:44:99:1518,117,0	0/0:26,0:26:78.26:0,78,1169	0/0:32,0:32:93.28:0,93,1349	0/0:30,0:30:90.26:0,90,1289	0/0:3,0:3:9.03:0,9,135
chr10	47379492	.	CTTTTCTTTTCTT	C	3466.33	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=5.146;DP=641;FS=1.641;HRun=0;HaplotypeScore=211.2400;InbreedingCoeff=0.7697;MQ=58.96;MQ0=27;MQRankSum=-6.200;QD=29.13;ReadPosRankSum=-2.352;VQSLOD=2.9743;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:84.24:0,84,4018	0/0:9,0:9:27.01:0,27,767	0/0:34,0:8:5.02:0,5,217	0/0:28,0:8:15.91:0,16,389	0/0:31,0:30:59.79:0,60,2470	0/0:20,0:19:54.17:0,54,2437	0/0:18,0:18:48.16:0,48,2156	0/0:42,0:41:68.66:0,69,2509	0/0:14,0:14:29.58:0,30,1192	0/0:21,0:19:20.67:0,21,1603	0/0:28,0:28:78.18:0,78,2715	0/0:21,0:21:42.10:0,42,1566	0/0:15,0:15:30.05:0,30,964	1/1:2,18:20:12.04:445,12,0	0/0:28,0:27:42.56:0,43,1699	0/0:20,0:20:54.01:0,54,1495	0/0:23,0:22:15.81:0,16,1553	0/1:30,0:30:31.78:32,0,1486	1/1:6,18:21:46.24:964,46,0	1/1:5,7:12:30.08:692,30,0	1/1:3,6:9:3.01:111,3,0	0/0:12,0:11:30.10:0,30,1062	0/0:19,0:18:49.46:0,49,1200	0/0:33,0:33:88.14:0,88,3132	0/0:26,0:26:2.21:0,2,1916	0/0:31,0:28:42.68:0,43,2202	1/1:2,22:24:32.62:1223,33,0	0/0:20,0:20:24.33:0,24,1174
chr10	47379502	.	CTT	C	6653.73	PASS	AB=0.533;AC=35;AF=0.648;AN=54;BaseQRankSum=0.202;DP=613;FS=0.000;HRun=12;HaplotypeScore=95.6659;InbreedingCoeff=0.8827;MQ=56.70;MQ0=27;MQRankSum=-1.288;QD=16.84;ReadPosRankSum=1.107;VQSLOD=4.0083;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:70.44:0,70,992	1/1:3,10:12:17.75:183,18,0	./.	0/0:28,0:8:8.94:0,9,88	1/1:9,20:30:68.33:646,68,0	0/0:22,0:20:51.13:0,51,692	0/0:17,0:18:47.84:0,48,604	1/1:10,25:34:68.64:670,69,0	0/0:2,0:15:24.95:0,25,88	1/1:3,16:18:45.06:457,45,0	1/1:4,24:29:67.42:669,67,0	0/0:5,0:19:31.46:0,31,173	0/1:2,1:16:7.54:8,0,47	1/1:19,0:19:10.88:75,11,0	1/1:3,24:27:47.66:466,48,0	1/1:4,14:19:41.82:408,42,0	1/1:5,21:25:34.91:471,35,0	1/1:4,24:28:45.56:459,46,0	1/1:21,1:20:18.86:257,19,0	1/1:9,1:10:14.78:107,15,0	1/1:6,0:6:2.96:19,3,0	0/0:5,0:12:16.92:0,17,58	0/0:6,0:16:26.84:0,27,139	0/0:7,0:32:64.37:0,64,315	1/1:2,20:23:38.43:500,38,0	1/1:9,19:27:62.46:592,62,0	1/1:23,0:22:32.22:212,32,0	1/1:0,18:18:45.09:452,45,0
chr10	47379831	.	A	AT	990.26	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-7.870;DP=600;FS=1.511;HRun=6;HaplotypeScore=57.4233;InbreedingCoeff=0.9865;MQ=74.94;MQ0=0;MQRankSum=0.669;QD=23.58;ReadPosRankSum=1.041;VQSLOD=3.0054;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:63.14:0,63,642	1/1:1,7:8:21.07:264,21,0	0/0:13,0:13:24.05:0,24,242	0/0:15,0:15:32.81:0,33,288	0/0:32,0:32:90.17:0,90,905	0/0:29,0:28:72.16:0,72,734	0/0:21,0:21:48.10:0,48,490	0/0:44,0:44:99:0,120,1205	0/0:24,0:24:66.13:0,66,666	0/0:19,0:19:42.05:0,42,418	0/0:20,0:20:57.10:0,57,573	0/0:21,0:21:57.13:0,57,582	0/0:24,0:24:66.15:0,66,673	0/0:14,0:14:39.09:0,39,398	1/1:2,14:16:30.10:377,30,0	1/1:3,15:18:39.12:491,39,0	0/0:27,0:27:75.11:0,75,752	0/0:25,0:25:75.16:0,75,760	0/0:23,0:23:60.13:0,60,612	0/0:15,0:15:39.09:0,39,398	0/0:22,0:22:57.13:0,57,581	0/0:19,0:19:48.11:0,48,490	0/0:15,0:15:45.10:0,45,459	0/0:22,0:22:63.12:0,63,634	0/0:26,0:26:66.11:0,66,653	0/0:32,0:32:87.20:0,87,887	0/0:29,0:28:75.17:0,75,765	0/0:4,0:4:12.03:0,12,122
chr10	47381861	.	GTGTGTT	G	3417.07	PASS	AB=0.848;AC=37;AF=0.712;AN=52;BaseQRankSum=7.915;DP=397;FS=6.874;HRun=0;HaplotypeScore=102.7795;InbreedingCoeff=0.5184;MQ=82.39;MQ0=2;MQRankSum=-7.070;QD=19.31;ReadPosRankSum=-1.100;VQSLOD=2.3588;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,147,4606	1/1:5,5:10:20.96:374,21,0	0/0:39,0:22:57.13:0,57,1543	0/0:52,0:36:63.51:0,64,1846	1/1:6,0:6:2.25:13,2,0	0/0:26,0:26:72.23:0,72,2248	0/0:32,0:32:96.29:0,96,3135	0/1:6,0:6:23.50:92,0,23	1/1:10,0:10:6:52,6,0	1/1:0,10:10:12.04:226,12,0	./.	1/1:6,0:6:12.03:199,12,0	1/1:4,0:4:8.95:78,9,0	./.	1/1:11,16:27:56.19:1108,56,0	0/0:6,0:6:1.76:0,2,14	1/1:9,1:11:15:193,15,0	1/1:11,0:11:20.11:168,20,0	1/1:2,6:8:18.01:280,18,0	0/1:1,5:6:10.97:11,0,26	1/1:16,0:16:12.02:193,12,0	0/1:7,0:7:2.58:3,0,13	1/1:4,0:4:2.50:61,3,0	1/1:13,0:13:2.62:24,3,0	1/1:0,5:5:3.01:68,3,0	1/1:9,2:11:12.11:157,12,0	1/1:3,0:3:3.01:50,3,0	1/1:3,0:3:3.01:68,3,0
chr10	47381863	.	GTGTT	G	2572.78	PASS	AB=1.000;AC=41;AF=0.788;AN=52;BaseQRankSum=9.197;DP=387;FS=12.545;HRun=0;HaplotypeScore=91.4062;InbreedingCoeff=0.6160;MQ=83.10;MQ0=2;MQRankSum=-7.643;QD=15.13;ReadPosRankSum=-1.579;VQSLOD=2.1023;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,156,3591	1/1:8,0:8:20.96:236,21,0	0/0:40,0:22:57.12:0,57,1195	0/0:53,0:37:64.84:0,65,1479	1/1:7,0:7:2.41:16,2,0	0/0:26,0:26:72.69:0,73,1745	0/0:34,0:34:99:0,102,2440	1/1:4,1:5:8.98:84,9,0	1/1:0,10:10:6.02:114,6,0	1/1:10,0:10:12.01:137,12,0	./.	1/1:6,0:6:12.02:137,12,0	1/1:4,0:4:8.95:80,9,0	./.	1/1:26,0:26:56.18:701,56,0	1/1:5,1:6:8.89:89,9,0	1/1:10,0:10:15:190,15,0	1/1:10,0:10:20.36:176,20,0	1/1:7,0:7:17.99:197,18,0	0/1:6,0:6:10.95:11,0,11	1/1:12,2:14:11.57:144,12,0	1/1:0,6:6:5.95:75,6,0	1/1:1,3:4:2.56:32,3,0	1/1:1,9:10:2.96:56,3,0	1/1:5,0:5:3.01:32,3,0	1/1:9,0:10:13.11:139,13,0	1/1:3,0:3:3.01:54,3,0	1/1:3,0:3:3.01:43,3,0
chr10	47381871	.	GTGT	G	1300.72	PASS	AB=1.000;AC=40;AF=0.741;AN=54;BaseQRankSum=10.049;DP=337;FS=13.281;HRun=0;HaplotypeScore=83.5235;InbreedingCoeff=0.5098;MQ=78.34;MQ0=2;MQRankSum=-8.208;QD=11.02;ReadPosRankSum=0.380;VQSLOD=2.2117;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,160,3739	1/1:5,0:5:14.86:101,15,0	0/0:37,0:19:57.18:0,57,1126	0/0:57,0:40:99:0,100,1927	1/1:2,1:3:2.82:35,3,0	0/0:26,0:26:69.20:0,69,1589	0/0:34,0:34:99:0,99,2360	0/1:4,0:4:13.73:14,0,18	1/1:7,0:7:5.93:41,6,0	1/1:10,0:10:8.90:54,9,0	./.	1/1:3,0:4:12.01:116,12,0	1/1:1,0:1:2.94:18,3,0	1/1:5,0:5:0.47:1,0,0	1/1:17,0:17:47.58:360,48,0	1/1:6,0:6:14.98:161,15,0	1/1:3,3:7:8.07:122,8,0	1/1:6,2:8:14.05:141,14,0	1/1:6,0:6:10.94:67,11,0	0/0:6,0:6:2.99:0,3,24	1/1:5,0:5:6.89:63,7,0	0/1:7,0:7:8.72:9,0,53	1/1:2,1:3:2.84:14,3,0	1/1:7,0:7:2.72:21,3,0	1/1:5,0:5:2.50:9,2,0	1/1:4,1:6:4.61:62,5,0	1/1:1,0:1:3.01:36,3,0	1/1:1,0:1:3:27,3,0
chr10	47381873	.	GT	G	776.84	PASS	AC=38;AF=0.704;AN=54;BaseQRankSum=9.672;DP=334;FS=5.528;HRun=1;HaplotypeScore=79.9552;InbreedingCoeff=0.6187;MQ=79.55;MQ0=2;MQRankSum=-8.416;QD=7.19;ReadPosRankSum=-0.186;VQSLOD=0.4532;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,160,2411	1/1:5,0:5:11.40:37,11,0	0/0:38,0:20:60.19:0,60,844	0/0:58,0:41:99:0,104,1364	1/1:2,1:3:2.68:35,3,0	0/0:25,0:25:66.20:0,66,1007	0/0:34,0:34:99:0,99,1510	1/1:3,0:3:2.96:19,3,0	1/1:6,0:6:2.80:7,3,0	1/1:7,0:7:5.66:21,6,0	./.	1/1:3,0:3:8.92:68,9,0	0/0:1,0:1:0.89:0,1,2	1/1:4,0:4:0.47:1,0,0	1/1:16,0:16:34.83:125,35,0	1/1:5,3:8:17.84:160,18,0	1/1:8,0:8:6.43:87,6,0	1/1:7,2:9:11.14:113,11,0	1/1:6,0:6:9.32:57,9,0	0/0:6,0:6:2.99:0,3,24	1/1:6,0:6:6.78:38,7,0	0/0:6,0:6:7.97:0,8,44	1/1:3,0:3:2.96:19,3,0	1/1:5,0:5:4.29:30,4,0	1/1:7,0:7:4.25:30,4,0	1/1:7,0:7:7.43:62,7,0	1/1:1,0:1:2.88:15,3,0	1/1:1,0:1:2.99:24,3,0
chr10	47381877	.	GGTGGGGTGGGTAAGGGA	G	2965.73	PASS	AB=1.000;AC=10;AF=0.179;AN=56;BaseQRankSum=6.935;DP=346;FS=1.602;HRun=0;HaplotypeScore=166.1735;InbreedingCoeff=0.4646;MQ=82.02;MQ0=2;MQRankSum=-7.238;QD=87.23;ReadPosRankSum=2.654;VQSLOD=3.4137;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,150,10914	1/1:0,5:5:15.05:744,15,0	0/0:40,0:22:48.67:0,49,2714	0/0:59,0:42:99:0,100,4743	0/0:6,0:6:6.64:0,7,209	0/0:25,0:25:72.17:0,72,4875	0/0:35,0:35:99:0,102,6931	0/0:4,0:4:1.29:0,1,173	0/0:6,0:6:12.04:0,12,466	0/0:5,0:5:3:0,3,176	0/0:7,0:7:3.48:0,3,68	0/1:4,0:4:6.28:6,0,556	0/0:4,0:4:8.76:0,9,311	0/0:6,0:6:12.04:0,12,566	1/1:0,16:16:48.16:2316,48,0	0/0:11,0:11:29.94:0,30,1656	0/0:9,0:9:7.63:0,8,620	0/0:10,0:10:21:0,21,888	1/1:3,0:3:3.27:12,3,0	0/0:3,0:3:2.94:0,3,18	0/1:5,0:5:10.83:11,0,116	0/0:6,0:6:12.51:0,13,760	0/0:3,0:3:0:0,0,0	0/0:5,0:5:9.03:0,9,485	0/0:6,0:6:17.99:0,18,1013	0/0:8,0:8:11.87:0,12,495	1/1:1,0:1:2.92:17,3,0	0/0:2,0:2:6.02:0,6,299
chr10	47383072	.	CGT	C	2000.34	PASS	AB=0.982;AC=27;AF=0.519;AN=52;BaseQRankSum=4.743;DP=514;FS=5.241;HRun=0;HaplotypeScore=140.1521;InbreedingCoeff=0.3272;MQ=60.15;MQ0=6;MQRankSum=-3.674;QD=6.03;ReadPosRankSum=3.580;VQSLOD=3.0536;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:44,3:47:3.80:4,0,1368	0/0:8,0:10:5.94:0,6,41	0/1:33,1:22:7.19:7,0,373	0/0:36,0:15:21:0,21,259	1/1:2,8:11:3.01:36,3,0	0/0:14,0:14:36.10:0,36,539	0/1:27,1:28:6.61:7,0,854	0/0:23,0:23:28.36:0,28,228	./.	1/1:7,8:15:30.09:362,30,0	./.	1/1:11,0:11:2.68:11,3,0	0/0:9,0:9:5.99:0,6,50	0/1:15,0:15:13.53:14,0,89	0/1:5,0:14:0.54:1,0,21	1/1:17,0:17:8.23:37,8,0	1/1:12,17:30:23.91:439,24,0	1/1:13,18:31:56.95:665,57,0	0/1:16,0:16:12.38:12,0,38	1/1:11,1:12:3.42:48,3,0	0/0:27,0:27:4.27:0,4,46	0/0:13,0:13:5.93:0,6,50	0/0:6,0:6:3:0,3,25	0/0:34,0:32:0.03:0,0,1	1/1:5,4:9:6:59,6,0	1/1:6,6:11:23.56:263,24,0	0/1:23,0:21:24.97:62,0,25	1/1:2,4:6:12.03:140,12,0
chr10	47383088	.	TGTGCGTGCGTGTGTGTGC	T	3711.18	PASS	AB=1.000;AC=25;AF=0.481;AN=52;BaseQRankSum=2.497;DP=490;FS=7.335;HRun=0;HaplotypeScore=237.4717;InbreedingCoeff=0.6790;MQ=49.85;MQ0=9;MQRankSum=-2.477;QD=16.64;ReadPosRankSum=-2.089;VQSLOD=1.4207;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,109,5877	0/0:10,0:9:5.17:0,5,42	0/0:28,0:14:12.93:0,13,372	0/0:33,0:11:8.72:0,9,257	0/0:10,0:10:4.57:0,5,115	0/0:14,0:14:42.14:0,42,2436	0/0:29,0:29:76.92:0,77,3980	1/1:27,0:27:71.53:753,72,0	./.	0/0:14,0:14:19.59:0,20,887	./.	1/1:17,0:16:3.01:139,3,0	1/1:9,0:9:3:25,3,0	1/1:12,2:14:31.87:740,32,0	0/0:15,0:15:4.23:0,4,26	1/1:15,0:15:9.03:200,9,0	0/1:33,0:33:33.93:34,0,918	0/0:31,0:31:79.08:0,79,2031	1/1:9,0:9:18.02:277,18,0	1/1:8,1:9:12.04:211,12,0	1/1:20,0:20:12.01:148,12,0	1/1:13,0:13:12:207,12,0	1/1:7,0:7:6:74,6,0	1/1:31,0:30:7.72:82,8,0	0/0:9,0:9:1.82:0,2,5	0/0:14,0:13:6.75:0,7,694	1/1:18,1:17:39.10:820,39,0	0/0:5,0:5:1.62:0,2,141
chr10	47383090	.	TGCGTGCGTGTGTGTGC	T	3797.84	PASS	AB=1.000;AC=25;AF=0.481;AN=52;BaseQRankSum=1.210;DP=487;FS=7.377;HRun=0;HaplotypeScore=222.0550;InbreedingCoeff=0.7173;MQ=49.31;MQ0=10;MQRankSum=-2.725;QD=17.34;ReadPosRankSum=-3.569;VQSLOD=1.0184;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,109,5165	0/0:9,0:10:4.92:0,5,57	0/0:27,0:13:12.93:0,13,341	0/0:33,0:11:8.72:0,9,207	0/0:10,0:10:6.02:0,6,139	0/0:14,0:14:42.14:0,42,2066	0/0:29,0:28:79.93:0,80,3567	1/1:1,25:26:72.06:950,72,0	./.	0/0:15,0:15:38.08:0,38,1023	./.	1/1:1,15:16:3.01:135,3,0	1/1:6,0:7:3.01:50,3,0	1/1:13,1:14:33.07:766,33,0	0/0:14,0:14:1.19:0,1,5	1/1:0,11:15:9.03:279,9,0	0/1:33,0:33:29.93:30,0,1236	0/0:32,0:31:79.20:0,79,2297	1/1:7,0:9:20.05:263,20,0	1/1:6,0:9:12.03:167,12,0	1/1:15,0:20:12.01:148,12,0	1/1:7,1:13:12.01:226,12,0	1/1:7,0:8:6:74,6,0	1/1:21,2:28:8.11:102,8,0	0/0:9,0:9:1.82:0,2,5	0/0:14,0:13:13.60:0,14,763	1/1:10,0:17:39.09:609,39,0	0/0:5,0:5:15.03:0,15,262
chr10	47383094	.	TGCGTGTGTGTGC	T	1994.92	PASS	AB=1.000;AC=28;AF=0.538;AN=52;BaseQRankSum=4.744;DP=479;FS=4.926;HRun=0;HaplotypeScore=199.6550;InbreedingCoeff=0.5600;MQ=43.02;MQ0=10;MQRankSum=-2.778;QD=7.89;ReadPosRankSum=-3.366;VQSLOD=2.0450;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,105,4500	0/0:11,0:10:7.49:0,7,55	0/0:22,0:9:22.88:0,23,201	0/0:32,0:9:13.46:0,13,160	0/0:10,0:10:6.02:0,6,77	0/0:14,0:14:42.10:0,42,1806	0/0:26,0:25:75.15:0,75,3029	1/1:25,0:25:48.65:430,49,0	./.	0/0:16,0:16:39.02:0,39,826	./.	0/1:18,0:17:11.69:94,0,12	1/1:7,0:7:2.86:24,3,0	1/1:13,0:13:22.85:397,23,0	1/1:12,0:12:4.51:27,5,0	1/1:11,4:15:9.03:281,9,0	0/1:32,0:32:2.38:2,0,868	0/0:34,0:33:62.39:0,62,1544	1/1:9,0:9:16.57:158,17,0	1/1:9,0:9:10.19:69,10,0	1/1:17,0:17:5.99:50,6,0	1/1:14,0:14:9.49:146,9,0	1/1:8,0:8:3:25,3,0	1/1:33,0:32:4.90:76,5,0	0/1:9,0:9:11.52:23,0,12	0/1:15,0:14:56.76:57,0,670	1/1:16,0:15:32.47:322,32,0	0/0:6,0:6:9.05:0,9,179
chr10	47383100	.	TGTGTGC	T	452.40	PASS	AB=0.991;AC=18;AF=0.333;AN=54;BaseQRankSum=5.593;DP=498;FS=8.157;HRun=0;HaplotypeScore=175.9793;InbreedingCoeff=0.2861;MQ=41.29;MQ0=11;MQRankSum=-4.624;QD=1.93;ReadPosRankSum=-1.353;VQSLOD=2.0280;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:98.49:0,98,2662	1/1:10,0:9:2.94:18,3,0	0/0:19,0:3:5.91:0,6,38	0/1:31,0:10:5.90:6,0,43	0/0:11,0:10:5.98:0,6,102	0/0:15,0:15:41.73:0,42,1049	0/0:25,0:24:71.87:0,72,2022	0/1:25,0:25:2.91:67,0,3	./.	0/0:16,0:16:27.72:0,28,304	0/0:6,0:6:3.01:0,3,36	0/1:17,1:17:18.49:43,0,18	0/0:7,1:8:2.89:0,3,24	0/1:15,0:15:15.44:147,0,15	1/1:14,0:14:5.97:49,6,0	1/1:15,0:15:9.03:162,9,0	0/0:33,0:33:54.21:0,54,701	0/0:34,0:32:77.28:0,77,1251	0/1:12,0:12:15.45:16,0,15	0/0:10,0:10:4.96:0,5,24	1/1:25,0:25:0.89:2,1,0	1/1:15,1:16:5.85:43,6,0	0/0:11,0:10:0:0,0,0	1/1:36,1:35:3.93:30,4,0	0/0:8,0:8:2.98:0,3,21	0/0:13,0:12:30.59:0,31,379	0/1:16,0:14:10.95:23,0,11	0/0:6,0:6:17.93:0,18,241
chr10	47383104	.	TGC	T	566.78	PASS	AB=0.990;AC=24;AF=0.444;AN=54;BaseQRankSum=7.415;DP=485;FS=1.247;HRun=0;HaplotypeScore=150.9583;InbreedingCoeff=0.2139;MQ=41.35;MQ0=12;MQRankSum=-6.498;QD=2.18;ReadPosRankSum=-0.904;VQSLOD=2.7270;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:79.88:0,80,1486	0/0:9,1:9:1.06:0,1,4	0/0:17,0:2:5.91:0,6,38	0/1:27,0:7:5.94:6,0,25	0/0:11,0:10:5.84:0,6,59	0/0:15,0:15:31.64:0,32,601	0/0:26,0:25:59.42:0,59,1141	1/1:25,0:25:12.94:192,13,0	./.	0/1:14,1:15:53.24:97,0,53	0/0:6,0:6:2.74:0,3,12	0/1:19,0:17:19.05:19,0,41	1/1:8,0:8:0.25:1,0,0	0/1:13,0:13:18.45:68,0,18	1/1:14,0:14:5.60:48,6,0	1/1:15,0:15:9.01:87,9,0	0/0:33,0:33:6.36:0,6,260	0/0:36,0:34:28.87:0,29,375	1/1:11,0:11:1.36:63,1,0	0/0:9,0:9:4.51:0,5,23	1/1:22,0:22:0.89:2,1,0	1/1:15,2:17:0.22:21,0,0	0/0:11,0:10:0:0,0,0	1/1:37,0:35:3.48:26,3,0	1/1:9,0:9:2.96:19,3,0	0/1:12,0:11:23.68:24,0,116	0/1:16,0:14:12.64:46,0,13	0/0:6,0:6:5.72:0,6,83
chr10	47383106	.	CGT	C	556.96	PASS	AB=0.958;AC=16;AF=0.296;AN=54;BaseQRankSum=6.228;DP=478;FS=0.668;HRun=0;HaplotypeScore=149.1323;InbreedingCoeff=0.0257;MQ=41.42;MQ0=11;MQRankSum=-5.128;QD=2.48;ReadPosRankSum=3.229;VQSLOD=2.2427;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,1:38:44.31:0,44,1183	0/0:11,0:10:2.56:0,3,23	0/0:15,0:2:2.96:0,3,19	0/0:25,0:7:2.88:0,3,15	0/0:8,3:10:2.94:0,3,18	0/1:15,0:15:3.99:4,0,458	0/0:24,2:25:25.68:0,26,900	0/0:27,0:27:11.26:0,11,69	./.	0/1:15,1:16:53.57:169,0,54	0/0:4,1:6:3.01:0,3,35	0/1:19,0:17:5.74:6,0,41	0/0:6,0:6:2.99:0,3,23	1/1:12,1:13:10.83:53,11,0	0/1:14,0:14:0:0,0,0	0/1:16,0:16:12.72:26,0,13	0/1:31,2:33:71.56:89,0,72	0/1:35,0:33:99:115,0,137	0/0:11,0:11:7.78:0,8,36	0/1:8,1:9:0:0,0,0	1/1:23,1:24:0.89:2,1,0	0/0:15,0:15:2.72:0,3,17	0/0:9,0:8:0:0,0,0	0/0:36,0:34:0.06:0,0,0	0/0:7,2:9:1.25:0,1,3	0/1:9,3:11:42.58:88,0,43	1/1:10,3:11:8.96:102,9,0	0/1:6,0:6:23.52:34,0,24
chr10	47383118	.	T	TGC	3024.54	PASS	AB=0.958;AC=20;AF=0.357;AN=56;BaseQRankSum=-1.046;DP=424;FS=1.948;HRun=0;HaplotypeScore=128.6059;InbreedingCoeff=0.4198;MQ=41.74;MQ0=9;MQRankSum=-2.059;QD=17.28;ReadPosRankSum=0.824;VQSLOD=3.9975;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:44.31:0,44,1126	0/0:8,0:8:2.72:0,3,33	0/0:9,0:1:2.96:0,3,19	0/0:11,0:2:3.01:0,3,33	1/1:4,6:9:3.01:58,3,0	0/1:12,0:12:3.99:4,0,424	0/0:25,0:24:66:0,66,907	0/0:22,0:22:29.28:0,29,213	0/0:5,0:5:0:0,0,0	1/1:5,10:15:12.89:534,13,0	0/1:4,2:6:8.02:8,0,15	0/0:19,0:17:11.92:0,12,104	0/0:5,0:5:5.99:0,6,49	0/1:10,0:10:17.43:49,0,17	0/0:13,0:14:5.99:0,6,49	0/0:14,0:14:14.85:0,15,110	1/1:5,25:31:39.10:675,39,0	1/1:6,28:34:60.17:1062,60,0	0/0:11,0:10:20.71:0,21,139	0/1:7,0:7:0:0,0,0	0/0:28,0:28:0.47:0,0,1	0/0:13,0:13:2.96:0,3,30	0/1:8,0:7:0:0,0,0	0/0:34,0:32:5.64:0,6,38	1/1:3,6:10:3.01:51,3,0	1/1:7,4:10:3.73:396,4,0	0/1:12,0:12:6.63:129,0,7	1/1:4,3:7:12.04:219,12,0
chr10	47383120	.	TGC	T	528.18	PASS	AB=0.992;AC=24;AF=0.429;AN=56;BaseQRankSum=6.629;DP=416;FS=6.377;HRun=0;HaplotypeScore=131.3636;InbreedingCoeff=0.3083;MQ=41.78;MQ0=10;MQRankSum=-5.514;QD=2.49;ReadPosRankSum=-4.397;VQSLOD=-0.3473;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,1:29:64.36:0,64,1393	0/0:9,0:8:2.50:0,2,17	0/0:9,0:1:2.96:0,3,19	0/0:10,0:2:2.98:0,3,21	0/0:10,0:9:2.88:0,3,42	0/0:12,0:12:22.74:0,23,584	0/0:23,0:22:47.43:0,47,1042	1/1:20,0:20:17.93:144,18,0	1/1:5,0:5:2.94:18,3,0	0/1:15,0:15:51.73:52,0,114	0/0:6,0:6:5.75:0,6,49	0/1:18,1:17:10.59:59,0,11	1/1:5,0:5:3.66:26,4,0	1/1:9,0:9:11.36:82,11,0	1/1:14,0:14:5.60:50,6,0	0/0:15,0:15:12.40:0,12,103	0/0:29,0:29:2.31:0,2,233	0/0:35,0:33:19.24:0,19,413	1/1:12,0:10:18.14:122,18,0	0/1:7,0:7:0:0,0,0	1/1:27,0:27:0.83:1,1,0	1/1:13,0:13:1.87:23,2,0	0/0:7,1:7:0:0,0,0	1/1:34,1:33:2.50:24,2,0	0/0:9,0:9:2.98:0,3,22	0/1:11,0:10:14.09:14,0,154	0/1:13,0:13:9.04:67,0,9	0/1:7,0:7:4.16:4,0,136
chr10	47383122	.	CGTGCGT	C	94.28	PASS	AB=0.960;AC=10;AF=0.179;AN=56;BaseQRankSum=4.571;DP=417;FS=0.000;HRun=0;HaplotypeScore=148.1865;InbreedingCoeff=0.3627;MQ=42.01;MQ0=9;MQRankSum=-2.414;QD=0.86;ReadPosRankSum=-0.189;VQSLOD=2.1423;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:78.23:0,78,1964	0/0:9,0:8:2.56:0,3,19	0/0:9,0:1:2.88:0,3,15	0/0:10,0:2:3:0,3,27	0/0:11,0:10:6.02:0,6,177	0/0:12,0:12:35.71:0,36,1008	0/0:23,0:22:63.20:0,63,1683	0/0:15,0:15:30.91:0,31,333	1/1:5,0:5:2.92:17,3,0	0/0:15,0:15:32.64:0,33,543	0/0:6,0:6:6.02:0,6,147	0/1:17,1:16:8.20:56,0,8	0/0:4,1:5:0.74:0,1,25	1/1:9,0:9:7.57:77,8,0	0/0:14,0:14:5.94:0,6,42	0/0:14,0:14:3.88:0,4,253	0/0:31,0:31:42.09:0,42,1003	0/0:34,0:32:61.15:0,61,1537	0/0:12,0:10:16.85:0,17,124	0/0:7,0:7:0.47:0,0,1	1/1:29,0:29:0.89:2,1,0	1/1:12,1:13:5.82:45,6,0	0/0:8,0:7:0:0,0,0	0/1:35,1:34:21.14:21,0,27	0/0:9,0:9:3.01:0,3,92	0/0:10,0:10:25.40:0,25,508	0/0:14,0:14:4.24:0,4,85	0/0:10,0:10:26.88:0,27,553
chr10	47383126	.	CGTGCGCGT	C	919.42	PASS	AB=0.979;AC=17;AF=0.304;AN=56;BaseQRankSum=3.442;DP=430;FS=3.976;HRun=0;HaplotypeScore=153.5092;InbreedingCoeff=0.5271;MQ=42.99;MQ0=8;MQRankSum=-3.649;QD=5.68;ReadPosRankSum=-0.860;VQSLOD=2.5334;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:81.20:0,81,1903	0/0:8,0:8:2.46:0,2,15	0/0:10,0:2:0.89:0,1,2	0/0:11,0:2:2.04:0,2,6	0/0:11,0:10:6.02:0,6,214	0/0:11,0:11:33.11:0,33,1081	0/0:24,0:24:66.20:0,66,1724	1/1:15,0:15:7.63:65,8,0	1/1:5,0:5:3.01:36,3,0	0/0:16,0:16:38.44:0,38,632	0/0:8,0:8:12.04:0,12,276	0/1:16,0:15:0.51:140,0,1	0/1:6,0:6:2.51:20,0,3	1/1:8,3:11:3.64:249,4,0	0/0:14,0:14:9.02:0,9,116	0/0:15,0:15:23.17:0,23,457	0/0:32,0:32:45.58:0,46,1189	0/0:35,0:33:63.21:0,63,1881	1/1:13,0:11:19.51:235,20,0	0/0:5,1:6:0.47:0,0,1	1/1:33,0:33:0.89:2,1,0	1/1:12,0:12:6.02:93,6,0	0/0:8,0:7:0:0,0,0	1/1:36,0:34:3.11:49,3,0	0/0:9,0:9:6.02:0,6,117	0/0:11,0:11:29.26:0,29,519	0/1:14,1:15:45.21:186,0,45	0/0:10,0:10:28.46:0,28,713
chr10	47383130	.	CGCGT	C	546.98	PASS	AB=0.878;AC=22;AF=0.407;AN=54;BaseQRankSum=5.290;DP=414;FS=0.941;HRun=0;HaplotypeScore=127.2596;InbreedingCoeff=0.5405;MQ=44.21;MQ0=7;MQRankSum=-3.716;QD=2.82;ReadPosRankSum=-0.142;VQSLOD=2.1782;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:27,1:28:12.93:13,0,597	0/1:7,0:7:0.32:0,0,0	0/0:10,0:2:0.47:0,0,1	./.	0/0:10,0:9:9.03:0,9,187	0/0:11,0:11:21.07:0,21,501	0/0:23,0:23:30.10:0,30,679	1/1:14,0:14:6.02:91,6,0	1/1:4,0:4:2.94:18,3,0	0/0:13,0:13:12.51:0,13,260	0/0:8,0:8:12.04:0,12,213	0/1:16,0:15:36.75:50,0,37	1/1:7,0:7:1.17:3,1,0	1/1:6,5:11:9.03:132,9,0	0/0:12,0:12:8.97:0,9,94	0/0:16,0:16:26.72:0,27,417	0/0:32,0:32:33.11:0,33,686	0/0:37,0:36:57.20:0,57,1204	1/1:8,5:11:12.01:167,12,0	0/1:1,5:6:0:0,0,0	1/1:14,19:33:0.89:2,1,0	1/1:10,0:10:5.49:33,5,0	0/0:9,0:8:0.88:0,1,2	1/1:31,0:31:2.37:23,2,0	0/0:7,0:7:6.02:0,6,117	0/0:9,0:9:13.86:0,14,291	1/1:3,9:12:12.04:174,12,0	0/0:10,0:10:24.07:0,24,477
chr10	47383132	.	CGT	C	67.40	PASS	AB=0.955;AC=14;AF=0.250;AN=56;BaseQRankSum=5.298;DP=410;FS=4.346;HRun=0;HaplotypeScore=112.2457;InbreedingCoeff=0.3863;MQ=45.34;MQ0=7;MQRankSum=-2.493;QD=0.57;ReadPosRankSum=-0.637;VQSLOD=1.8133;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:81.76:0,82,1279	0/1:7,0:7:0.04:0,0,0	0/0:10,0:2:0.47:0,0,1	0/0:13,0:2:3.01:0,3,41	0/0:9,0:8:9.03:0,9,173	0/0:11,0:11:33.09:0,33,550	0/0:24,0:24:66.21:0,66,1053	0/0:13,0:13:10.91:0,11,277	0/0:3,0:3:0:0,0,0	0/0:14,0:14:36.11:0,36,512	0/0:8,0:8:15.04:0,15,254	0/1:15,1:15:17.32:17,0,18	0/1:6,1:7:12.20:31,0,12	1/1:9,0:9:8.68:47,9,0	0/0:13,0:13:12.03:0,12,174	0/0:16,0:16:13.52:0,14,419	0/0:30,0:30:48.12:0,48,762	0/0:39,0:38:72.21:0,72,1234	0/1:13,0:11:19.26:19,0,151	0/1:6,0:6:0:0,0,0	1/1:32,0:32:0.83:1,1,0	0/1:10,1:11:3.77:42,0,4	1/1:8,0:7:2.72:16,3,0	0/0:31,1:30:2.48:0,2,19	0/0:8,0:8:9.02:0,9,139	0/0:8,0:8:24.08:0,24,381	1/1:10,0:10:9.31:31,9,0	0/0:8,0:8:24.08:0,24,448
chr10	47383610	.	T	TA	1314.56	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-8.770;DP=715;FS=0.594;HRun=6;HaplotypeScore=68.4260;InbreedingCoeff=0.9767;MQ=77.37;MQ0=0;MQRankSum=0.003;QD=30.57;ReadPosRankSum=1.661;VQSLOD=4.2849;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:93.19:0,93,942	1/1:0,7:7:18.06:226,18,0	0/0:21,0:20:28.80:0,29,377	0/0:14,0:14:11.30:0,11,179	0/0:30,0:30:81.18:0,81,826	0/0:29,0:29:72.16:0,72,735	0/0:17,0:17:45.08:0,45,452	0/0:36,0:36:96.19:0,96,964	0/0:36,0:36:99:0,99,1003	0/0:24,0:24:66.14:0,66,668	0/0:16,0:16:45.10:0,45,459	0/0:24,0:24:69.16:0,69,704	0/0:26,0:26:63.14:0,63,643	0/0:28,0:28:81.18:0,81,826	1/1:3,33:36:96.31:1208,96,0	0/0:27,0:27:78.17:0,78,796	0/0:20,0:20:48.10:0,48,490	0/0:21,0:21:60.14:0,60,612	0/0:29,0:29:78.16:0,78,789	0/0:23,0:23:66.15:0,66,673	0/0:27,0:27:75.17:0,75,765	0/0:27,0:27:69.13:0,69,696	0/0:26,0:26:63.12:0,63,635	0/0:27,0:27:78.14:0,78,784	0/0:29,0:29:81.14:0,81,811	0/0:29,0:29:78.16:0,78,790	0/0:42,0:42:99:0,120,1224	0/0:9,0:9:27.06:0,27,275
chr10	47383989	.	T	TG	513.52	PASS	AB=0.941;AC=8;AF=0.143;AN=56;BaseQRankSum=-3.979;DP=519;FS=7.309;HRun=9;HaplotypeScore=72.3001;InbreedingCoeff=0.6750;MQ=72.99;MQ0=1;MQRankSum=0.070;QD=6.34;ReadPosRankSum=-0.672;VQSLOD=0.8805;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:71.96:0,72,625	0/0:5,0:5:12:0,12,104	0/1:19,0:17:3.27:3,0,43	0/0:28,0:20:28.79:0,29,175	0/0:14,0:14:29.98:0,30,260	1/1:7,7:14:15.04:166,15,0	1/1:5,15:20:1.02:239,1,0	0/0:26,0:26:32.57:0,33,286	0/0:19,0:19:41.93:0,42,355	0/0:20,0:20:44.97:0,45,387	0/0:10,0:10:17.98:0,18,156	0/0:18,0:18:13.76:0,14,287	0/0:29,0:29:56.92:0,57,491	0/0:19,0:19:41.95:0,42,360	0/0:17,0:17:29.65:0,30,248	1/1:3,10:13:21.06:232,21,0	0/0:36,0:36:83.95:0,84,725	0/0:17,0:18:44.03:0,44,371	0/0:10,0:11:17.95:0,18,149	0/0:17,0:17:23.97:0,24,208	0/0:25,0:25:38.95:0,39,339	0/0:14,0:14:23.99:0,24,208	0/0:11,0:11:14.97:0,15,130	0/0:19,0:19:35.95:0,36,312	0/0:13,0:13:29.98:0,30,261	0/0:21,0:21:50.98:0,51,442	0/0:14,0:14:29.98:0,30,260	0/1:13,2:15:2.96:3,0,204
chr10	47384929	.	AC	A	4147.17	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=11.493;DP=617;FS=2.772;HRun=3;HaplotypeScore=60.3252;InbreedingCoeff=0.9906;MQ=89.66;MQ0=0;MQRankSum=-2.746;QD=33.44;ReadPosRankSum=4.249;VQSLOD=4.1415;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,105,1512	0/0:4,0:4:12.04:0,12,173	0/0:27,0:27:72.64:0,73,1005	0/0:21,0:21:60.13:0,60,816	1/1:1,10:11:27.08:332,27,0	0/0:24,0:24:69.22:0,69,975	0/0:37,0:37:99:0,108,1515	0/0:26,0:26:78.26:0,78,1108	0/0:19,0:19:57.19:0,57,819	1/1:0,14:14:42.13:521,42,0	1/1:0,6:6:15.05:186,15,0	0/0:41,0:41:99:0,117,1659	0/0:15,0:15:36.12:0,36,518	0/0:25,0:25:75.24:0,75,1062	0/0:21,0:21:60.20:0,60,864	0/0:20,0:20:60.20:0,60,862	1/1:1,24:25:69.21:855,69,0	1/1:1,17:18:42.13:519,42,0	0/0:25,0:25:69.21:0,69,957	0/0:14,0:14:42.14:0,42,605	0/0:48,0:48:99:0,141,1983	0/0:13,0:13:30.09:0,30,413	0/0:20,0:20:57.19:0,57,819	0/0:31,0:31:90.29:0,90,1275	1/1:0,17:17:48.15:595,48,0	1/1:1,24:25:75.23:916,75,0	0/0:25,0:25:72.23:0,72,1014	1/1:0,8:8:18.06:223,18,0
chr10	47385201	.	CAA	C	1517.66	PASS	AB=0.607;AC=18;AF=0.321;AN=56;BaseQRankSum=1.337;DP=481;FS=3.212;HRun=13;HaplotypeScore=79.2215;InbreedingCoeff=0.4895;MQ=48.40;MQ0=9;MQRankSum=3.074;QD=8.20;ReadPosRankSum=1.428;VQSLOD=1.4993;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:33:64.59:0,65,783	1/1:3,9:12:20.99:204,21,0	0/0:5,0:2:6.02:0,6,77	0/0:4,0:1:0.47:0,0,1	0/0:13,0:22:39.36:0,39,349	0/0:5,0:14:24.01:0,24,235	0/0:6,0:27:42.07:0,42,415	0/0:28,0:27:62.96:0,63,796	0/1:5,2:14:18.19:42,0,18	0/0:7,0:15:34.43:0,34,282	0/0:12,0:17:36.30:0,36,307	0/1:6,2:18:8.27:8,0,50	0/0:7,1:15:14.85:0,15,51	1/1:6,13:19:35.75:332,36,0	1/1:5,13:16:27.02:261,27,0	0/0:14,0:15:32.85:0,33,408	0/0:13,0:21:26.94:0,27,238	0/0:9,0:17:26.93:0,27,243	1/1:6,10:15:26.83:302,27,0	1/1:8,10:18:29.70:274,30,0	1/1:2,2:3:6.01:58,6,0	0/1:5,1:13:20.23:20,0,31	0/1:6,1:16:4.14:4,0,124	0/1:4,1:12:20.23:20,0,31	0/0:15,0:21:38.76:0,39,317	0/0:9,0:18:43.65:0,44,383	0/1:8,13:20:19.27:180,0,19	0/0:9,0:15:23.95:0,24,206
chr10	47386728	.	A	ACGC	2647.07	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-9.591;DP=788;FS=14.464;HRun=0;HaplotypeScore=119.0297;InbreedingCoeff=0.9999;MQ=82.35;MQ0=0;MQRankSum=-1.926;QD=51.90;ReadPosRankSum=1.789;VQSLOD=5.2790;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,126,2085	1/1:0,12:13:36.12:810,36,0	0/0:19,0:19:48.64:0,49,790	0/0:25,0:26:62.61:0,63,908	0/0:23,0:23:66.23:0,66,1099	0/0:18,0:18:48.16:0,48,800	0/0:37,0:37:99:0,102,1695	0/0:36,0:35:99:0,105,1698	0/0:21,0:21:60.17:0,60,949	0/0:26,0:26:72.25:0,72,1198	0/0:22,0:22:63.20:0,63,1007	0/0:31,0:31:87.30:0,87,1446	0/0:40,0:40:99:0,117,1937	0/0:27,0:27:78.27:0,78,1296	1/1:5,32:38:87.30:1958,87,0	0/0:36,0:36:99:0,105,1748	0/0:24,0:24:69.24:0,69,1150	0/0:26,0:26:75.22:0,75,1221	0/0:24,0:24:66.23:0,66,1095	0/0:23,0:23:66.23:0,66,1100	0/0:59,0:59:99:0,178,2935	0/0:23,0:23:69.24:0,69,1149	0/0:24,0:24:66.23:0,66,1094	0/0:31,0:31:93.32:0,93,1550	0/0:22,0:22:66.20:0,66,1050	0/0:29,0:29:84.28:0,84,1377	0/0:27,0:27:81.28:0,81,1347	0/0:18,0:17:48.15:0,48,774
chr10	47387336	.	T	TG	25871.38	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-13.581;DP=797;FS=2.495;HRun=2;HaplotypeScore=70.5948;InbreedingCoeff=0.9978;MQ=86.34;MQ0=0;MQRankSum=-8.440;QD=39.44;ReadPosRankSum=3.147;VQSLOD=5.5136;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,126,1562	1/1:0,8:8:21.07:302,21,0	0/0:33,0:33:83.74:0,84,1005	0/0:19,0:19:54.06:0,54,648	1/1:1,26:27:78.22:1098,78,0	0/0:28,0:28:78.22:0,78,953	0/0:17,0:17:48.13:0,48,581	1/1:5,25:30:75.24:1059,75,0	1/1:0,29:29:77.83:1123,78,0	1/1:2,38:40:99:1666,117,0	1/1:0,17:17:48.16:691,48,0	1/1:0,35:35:99:1469,102,0	1/1:1,28:30:87.29:1250,87,0	1/1:2,30:32:84.28:1210,84,0	1/1:1,33:34:90.30:1296,90,0	1/1:1,28:29:75.25:1080,75,0	1/1:2,31:33:90.30:1296,90,0	1/1:1,21:22:19.95:717,20,0	1/1:1,25:26:72.24:1026,72,0	1/1:0,25:25:69.23:993,69,0	1/1:1,53:54:99:2290,160,0	1/1:0,22:22:63.21:906,63,0	1/1:0,21:21:54.18:777,54,0	1/1:0,38:38:99:1556,108,0	1/1:4,27:31:78.26:1123,78,0	1/1:2,30:32:90.29:1276,90,0	1/1:1,24:24:69.23:993,69,0	1/1:0,15:16:48.15:673,48,0
chr10	47389087	.	T	TAA	10317.05	PASS	AB=0.579;AC=43;AF=0.768;AN=56;BaseQRankSum=-2.193;DP=570;FS=0.467;HRun=10;HaplotypeScore=79.0031;InbreedingCoeff=0.6901;MQ=69.31;MQ0=0;MQRankSum=-2.084;QD=21.32;ReadPosRankSum=2.100;VQSLOD=4.1601;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:15:35.73:0,36,325	1/1:4,15:19:42.14:626,42,0	0/0:19,0:14:30.03:0,30,299	0/0:18,0:16:32.45:0,32,330	1/1:4,0:35:45.33:235,45,0	0/0:24,0:24:66.13:0,66,671	0/0:10,0:10:18.02:0,18,183	1/1:9,14:24:42.14:602,42,0	1/1:0,10:11:29.59:411,30,0	0/1:7,1:21:19.57:117,0,20	1/1:3,0:27:37.15:159,37,0	1/1:2,15:17:30.10:447,30,0	1/1:1,11:14:38.10:506,38,0	1/1:1,16:19:41.11:556,41,0	1/1:0,29:31:77.23:1088,77,0	1/1:4,0:20:7.30:92,7,0	1/1:3,0:14:27.32:96,27,0	0/1:6,0:17:57.09:57,0,83	1/1:3,16:20:53.60:688,54,0	1/1:2,27:30:78.18:1106,78,0	1/1:0,6:7:20.56:277,21,0	1/1:3,13:19:44.59:591,45,0	1/1:1,16:21:47.90:664,48,0	1/1:3,14:19:38.10:508,38,0	1/1:2,0:21:27.45:97,27,0	0/1:3,1:22:8.33:157,0,8	1/1:0,30:32:77.63:1125,78,0	1/1:3,0:19:12.42:110,12,0
chr10	47390341	.	CA	C	445.25	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.527;DP=571;FS=0.000;HRun=4;HaplotypeScore=54.4286;InbreedingCoeff=0.8821;MQ=68.52;MQ0=0;MQRankSum=0.273;QD=23.43;ReadPosRankSum=0.707;VQSLOD=2.4462;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,105,1434	0/0:5,0:5:15.05:0,15,210	0/0:11,0:11:20.80:0,21,266	0/0:9,0:9:20.85:0,21,253	0/0:14,0:14:36.12:0,36,504	0/0:15,0:15:45.15:0,45,630	0/0:30,0:30:90.30:0,90,1259	0/0:34,0:34:99:0,99,1297	0/0:22,0:22:60.17:0,60,805	0/0:20,0:20:57.19:0,57,793	0/0:8,0:8:21.07:0,21,294	0/0:28,0:28:81.25:0,81,1101	0/0:29,0:29:84.28:0,84,1176	0/0:22,0:22:66.22:0,66,919	0/0:22,0:22:66.22:0,66,924	1/1:0,19:19:45.14:540,45,0	0/0:19,0:19:54.15:0,54,735	0/0:37,0:37:99:0,105,1469	0/0:23,0:23:66.20:0,66,890	0/0:15,0:15:45.15:0,45,628	0/0:35,0:35:99:0,102,1426	0/0:12,0:12:36.12:0,36,504	0/0:14,0:14:39.11:0,39,516	0/0:36,0:36:99:0,105,1470	0/0:15,0:15:45.15:0,45,629	0/0:17,0:17:51.17:0,51,712	0/0:22,0:22:63.20:0,63,865	0/0:2,0:2:6.02:0,6,84
chr10	47390886	.	CTATTTA	C	2435.75	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=2.923;DP=819;FS=0.000;HRun=0;HaplotypeScore=223.1991;InbreedingCoeff=0.9989;MQ=75.69;MQ0=0;MQRankSum=-10.092;QD=42.73;ReadPosRankSum=0.153;VQSLOD=3.3726;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,117,3979	1/1:3,8:11:24.08:538,24,0	0/0:31,0:30:69.19:0,69,2102	0/0:23,0:23:39.06:0,39,982	0/0:31,0:31:90.31:0,90,3049	0/0:31,0:31:81.26:0,81,2714	0/0:27,0:27:75.25:0,75,2404	0/0:38,0:38:99:0,99,3132	0/0:30,0:30:87.30:0,87,2937	0/0:41,0:41:99:0,102,3387	0/0:17,0:17:51.17:0,51,1619	0/0:30,0:30:84.27:0,84,2761	0/0:30,0:30:84.25:0,84,2624	0/0:33,0:33:87.29:0,87,2893	1/1:10,36:46:90.31:2018,90,0	0/0:32,0:32:90.30:0,90,3016	0/0:27,0:27:78.25:0,78,2569	0/0:38,0:38:99:0,99,3343	0/0:28,0:27:66.23:0,66,2242	0/0:33,0:33:91.54:0,92,3016	0/0:24,0:24:66.23:0,66,2210	0/0:22,0:22:60.21:0,60,2041	0/0:22,0:22:66.23:0,66,2223	0/0:34,0:34:96.31:0,96,3157	0/0:22,0:21:54.17:0,54,1771	0/0:30,0:30:87.29:0,87,2923	0/0:24,0:24:72.23:0,72,2323	0/0:23,0:23:66.23:0,66,2249
chr10	47393190	.	TA	T	449.75	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=1.764;DP=665;FS=0.000;HRun=5;HaplotypeScore=75.1922;InbreedingCoeff=0.9158;MQ=67.67;MQ0=0;MQRankSum=0.481;QD=24.99;ReadPosRankSum=1.227;VQSLOD=2.8001;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:87.27:0,87,1172	0/0:13,0:13:33.10:0,33,435	0/0:7,0:7:11.87:0,12,121	0/0:6,0:6:8.93:0,9,79	0/0:37,0:37:99:0,108,1477	0/0:33,0:33:90.30:0,90,1228	0/0:23,0:23:66.19:0,66,867	0/0:41,0:41:99:0,114,1529	0/0:18,0:18:51.16:0,51,684	0/0:32,0:32:96.32:0,96,1313	0/0:25,0:25:75.23:0,75,997	0/0:18,0:18:45.14:0,45,601	0/0:23,0:23:63.20:0,63,841	0/0:28,0:28:78.26:0,78,1067	0/0:28,0:28:84.26:0,84,1116	1/1:2,16:18:48.14:545,48,0	0/0:32,0:32:93.31:0,93,1269	0/0:25,0:25:72.22:0,72,968	0/0:28,0:28:78.25:0,78,1053	0/0:40,0:40:99:0,114,1558	0/0:18,0:18:51.16:0,51,682	0/0:25,0:25:66.22:0,66,902	0/0:23,0:23:69.22:0,69,928	0/0:14,0:14:39.13:0,39,534	0/0:20,0:20:48.16:0,48,654	0/0:24,0:24:60.20:0,60,821	0/0:27,0:26:81.26:0,81,1091	0/0:10,0:10:30.10:0,30,410
chr10	47394979	.	C	CTCCT	2052.83	PASS	AB=0.985;AC=23;AF=0.411;AN=56;BaseQRankSum=2.861;DP=323;FS=3.781;HRun=0;HaplotypeScore=75.6674;InbreedingCoeff=0.4403;MQ=36.81;MQ0=43;MQRankSum=-2.648;QD=13.87;ReadPosRankSum=0.834;VQSLOD=2.7000;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:19:45.07:0,45,732	0/0:7,0:4:10.69:0,11,72	0/0:17,0:1:0:0,0,0	0/0:27,0:7:3.01:0,3,52	1/1:14,4:16:14.62:168,15,0	0/0:11,0:10:20.87:0,21,296	0/0:11,0:11:8.06:0,8,234	0/1:13,0:10:15.67:16,0,136	0/0:14,0:12:21:0,21,338	1/1:5,0:6:15.01:153,15,0	1/1:5,2:7:5.93:40,6,0	0/0:6,0:6:9.03:0,9,129	0/0:8,0:7:17.85:0,18,284	1/1:4,0:4:2.67:47,3,0	0/0:14,0:12:13.68:0,14,110	0/0:11,0:7:14.77:0,15,189	0/1:11,1:9:13.66:87,0,14	1/1:9,1:8:2.82:259,3,0	0/1:8,0:6:15.61:16,0,36	0/1:14,0:12:32.55:33,0,56	1/1:9,0:6:2.93:46,3,0	0/0:10,0:9:16.19:0,16,222	0/0:6,0:6:15.05:0,15,284	0/0:11,0:9:11.97:0,12,227	1/1:9,4:12:17.92:361,18,0	1/1:12,5:16:39.03:862,39,0	0/1:5,0:5:17.40:17,0,56	1/1:5,6:6:6.02:134,6,0
chr10	47394991	.	C	CTT	269.32	PASS	AB=0.732;AC=2;AF=0.036;AN=56;BaseQRankSum=0.895;DP=323;FS=1.403;HRun=1;HaplotypeScore=64.1928;InbreedingCoeff=-0.0181;MQ=44.45;MQ0=34;MQRankSum=-0.263;QD=13.47;ReadPosRankSum=-0.759;VQSLOD=0.3115;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:21:60.08:0,60,861	0/1:3,2:4:11.01:83,0,11	0/0:29,0:7:8.67:0,9,114	0/0:38,0:7:5.22:0,5,71	0/0:19,0:18:38.50:0,39,560	0/0:7,0:7:21.07:0,21,310	0/0:9,0:9:24.35:0,24,324	0/0:10,0:9:20.99:0,21,260	0/0:9,0:8:21.07:0,21,321	0/0:6,0:5:14.97:0,15,200	0/0:11,0:11:30:0,30,424	0/0:8,0:8:17.73:0,18,243	0/0:11,0:11:27.09:0,27,412	0/0:3,0:3:5.69:0,6,30	0/1:10,5:13:32.30:274,0,32	0/0:11,0:8:18.06:0,18,274	0/0:7,0:4:11.99:0,12,130	0/0:8,0:7:17.64:0,18,209	0/0:6,0:4:9.03:0,9,125	0/0:10,0:10:21.33:0,21,287	0/0:8,0:5:5.81:0,6,57	0/0:9,0:8:19.31:0,19,260	0/0:6,0:6:18.06:0,18,276	0/0:9,0:8:18.06:0,18,272	0/0:12,0:11:21.10:0,21,240	0/0:17,0:17:43.92:0,44,434	0/0:3,0:3:9.01:0,9,115	0/0:11,0:6:8.94:0,9,91
chr10	47395020	.	TCTCC	T	2981.22	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=7.518;DP=391;FS=1.101;HRun=0;HaplotypeScore=75.4122;InbreedingCoeff=0.9466;MQ=61.41;MQ0=13;MQRankSum=-1.541;QD=33.88;ReadPosRankSum=3.986;VQSLOD=3.7342;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:33:95.07:0,95,2170	0/0:4,0:3:6.02:0,6,124	0/0:41,0:23:39.03:0,39,961	0/0:45,0:14:18.03:0,18,259	1/1:2,16:18:42.08:678,42,0	0/0:10,0:10:30.10:0,30,732	0/0:15,0:15:42.14:0,42,1007	0/0:14,0:14:24.08:0,24,540	0/0:7,0:7:21.07:0,21,508	1/1:1,8:9:24.08:391,24,0	1/1:0,13:13:33.11:541,33,0	0/0:15,0:15:39.08:0,39,905	0/0:14,0:14:38.49:0,38,814	0/0:6,0:6:15.05:0,15,379	0/0:17,0:17:36.12:0,36,884	0/0:6,0:6:18.06:0,18,429	1/1:1,10:10:21.07:363,21,0	1/1:3,6:9:14.64:259,15,0	0/0:14,0:13:24.08:0,24,583	0/0:13,0:13:36.12:0,36,834	0/0:9,0:9:27.08:0,27,605	0/0:10,0:10:27.09:0,27,642	0/0:7,0:7:15.05:0,15,337	0/0:8,0:8:21.07:0,21,504	1/1:3,5:8:15.05:259,15,0	1/1:5,12:17:36.10:589,36,0	0/0:6,0:6:18.06:0,18,443	1/1:1,2:3:6.02:104,6,0
chr10	47396071	.	C	CA	1669.49	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-5.927;DP=651;FS=0.599;HRun=1;HaplotypeScore=64.8754;InbreedingCoeff=0.9855;MQ=80.01;MQ0=0;MQRankSum=-1.927;QD=38.83;ReadPosRankSum=3.589;VQSLOD=4.2643;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,132,1571	1/1:1,10:11:30.10:443,30,0	0/0:15,0:15:12.70:0,13,334	0/0:18,0:19:44.93:0,45,505	0/0:12,0:12:36.12:0,36,466	0/0:12,0:12:30.10:0,30,389	0/0:27,0:27:81.20:0,81,1000	0/0:18,0:18:45.11:0,45,522	0/0:25,0:25:69.22:0,69,895	0/0:20,0:20:54.15:0,54,671	0/0:10,0:10:30.08:0,30,374	0/0:27,0:27:81.24:0,81,1033	0/0:24,0:24:72.22:0,72,915	0/0:39,0:39:99:0,117,1465	1/1:0,32:32:90.30:1348,90,0	0/0:23,0:23:66.21:0,66,857	0/0:43,0:43:99:0,126,1617	0/0:19,0:19:57.15:0,57,721	0/0:20,0:20:57.14:0,57,697	0/0:16,0:16:39.06:0,39,468	0/0:39,0:39:99:0,108,1400	0/0:15,0:15:42.14:0,42,545	0/0:18,0:18:54.17:0,54,697	0/0:34,0:33:99:0,99,1251	0/0:27,0:27:81.26:0,81,1051	0/0:22,0:22:63.20:0,63,816	0/0:15,0:15:45.09:0,45,550	0/0:22,0:22:60.19:0,60,779
chr10	47397581	.	CCACA	C	640.90	PASS	AB=0.749;AC=21;AF=0.457;AN=46;BaseQRankSum=0.779;DP=344;FS=10.934;HRun=0;HaplotypeScore=63.0751;InbreedingCoeff=0.4805;MQ=71.79;MQ0=12;MQRankSum=-0.008;QD=4.61;ReadPosRankSum=1.336;VQSLOD=0.3789;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:21.07:0,21,326	1/1:2,0:6:3.89:30,4,0	./.	./.	0/0:4,0:6:2.74:0,3,12	1/1:11,0:10:3:28,3,0	0/0:18,0:17:8.69:0,9,69	0/0:15,0:14:0.47:0,0,1	1/1:7,4:10:9.02:118,9,0	0/0:5,0:6:2.60:0,3,10	./.	1/1:3,0:4:3.01:46,3,0	1/1:6,4:10:4.94:72,5,0	./.	1/1:8,0:15:9.01:82,9,0	0/0:5,0:5:6.02:0,6,122	0/1:12,0:15:16.19:16,0,26	1/1:17,2:20:5.61:209,6,0	./.	0/0:7,0:10:3.01:0,3,65	0/0:18,0:18:12.02:0,12,232	0/1:6,0:10:0:0,0,0	0/1:4,3:7:0:0,0,0	1/1:14,7:21:9.03:137,9,0	0/0:5,0:5:8.22:0,8,36	0/0:4,0:3:2.80:0,3,13	1/1:5,1:6:3.01:46,3,0	0/0:15,0:15:13.99:0,14,112
chr10	47397675	.	T	TTATA	2341.14	PASS	AC=20;AF=0.526;AN=38;BaseQRankSum=-2.117;DP=196;FS=2.920;HRun=0;HaplotypeScore=40.5429;InbreedingCoeff=0.6989;MQ=87.68;MQ0=4;MQRankSum=-1.631;QD=26.01;ReadPosRankSum=1.216;VQSLOD=2.9828;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:24.03:0,24,345	./.	0/0:11,0:8:5.03:0,5,46	0/0:24,0:12:8.49:0,8,74	1/1:1,1:3:3.01:74,3,0	0/0:15,0:15:14.94:0,15,575	./.	1/1:16,0:14:20.91:240,21,0	0/0:4,0:4:12.04:0,12,189	1/1:2,5:7:15.05:345,15,0	1/1:5,1:5:3.01:74,3,0	0/0:1,0:1:3.01:0,3,50	0/0:3,0:3:9.03:0,9,150	./.	0/0:2,0:4:6.01:0,6,56	1/1:2,0:3:2.74:12,3,0	1/1:3,9:19:46.89:874,47,0	1/1:11,5:17:20.77:403,21,0	./.	./.	./.	0/0:6,0:6:6.02:0,6,100	./.	./.	1/1:4,4:9:11.72:235,12,0	./.	1/1:2,0:2:3.01:44,3,0	1/1:3,3:8:9.03:192,9,0
chr10	47398803	.	TAGTG	T	4234.31	PASS	AB=0.795;AC=32;AF=0.571;AN=56;BaseQRankSum=8.645;DP=582;FS=5.668;HRun=0;HaplotypeScore=185.3217;InbreedingCoeff=0.7002;MQ=69.78;MQ0=1;MQRankSum=-7.369;QD=14.11;ReadPosRankSum=2.723;VQSLOD=4.1168;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,126,2794	1/1:8,0:8:14.91:140,15,0	0/0:29,0:24:54.68:0,55,945	0/0:21,0:17:26.10:0,26,323	1/1:25,0:25:30.09:337,30,0	1/1:17,3:20:23.66:316,24,0	0/1:11,11:22:23.67:24,0,96	0/0:28,0:26:69.11:0,69,1283	0/1:3,8:11:8.56:38,0,9	1/1:23,0:23:59.92:658,60,0	1/1:18,0:18:21.06:236,21,0	1/1:7,3:10:10.34:102,10,0	1/1:2,16:18:4.58:52,5,0	0/0:27,0:27:54.08:0,54,934	1/1:19,0:19:27.07:299,27,0	0/0:25,0:25:75.20:0,75,1666	1/1:21,0:21:21:211,21,0	1/1:11,0:11:21.06:237,21,0	0/0:35,0:35:99:0,105,1814	0/0:17,0:17:33.09:0,33,589	0/0:26,0:26:32.86:0,33,336	1/1:3,8:11:3.48:38,3,0	0/1:13,0:13:3.65:40,0,4	0/1:13,1:14:6.49:116,0,6	1/1:17,0:17:27.08:304,27,0	1/1:32,0:32:84.01:863,84,0	0/0:30,0:30:60.16:0,60,1093	1/1:7,0:7:20.97:222,21,0
chr10	47398804	.	AGTGAGTGT	A	7960.09	PASS	AB=1.000;AC=24;AF=0.429;AN=56;BaseQRankSum=3.708;DP=582;FS=4.262;HRun=0;HaplotypeScore=206.1463;InbreedingCoeff=0.6583;MQ=68.92;MQ0=1;MQRankSum=-7.856;QD=32.76;ReadPosRankSum=2.925;VQSLOD=4.6380;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,126,4810	1/1:0,0:8:14.91:233,15,0	0/0:28,0:23:50.20:0,50,1497	0/0:21,0:17:26.13:0,26,445	1/1:2,22:24:30.10:845,30,0	0/1:21,0:21:72.35:72,0,234	0/0:21,0:21:16.59:0,17,583	0/0:32,0:30:81.26:0,81,2555	0/0:10,0:11:1.01:0,1,127	1/1:1,20:23:60:1336,60,0	1/1:0,17:18:21.07:591,21,0	0/1:10,0:10:12.95:13,0,129	0/1:18,0:18:11.44:11,0,57	0/0:27,0:27:54.09:0,54,1674	1/1:0,0:19:27.09:562,27,0	0/0:25,0:25:75.21:0,75,2790	1/1:1,16:21:21.02:511,21,0	1/1:0,11:11:21.07:593,21,0	0/0:35,0:35:99:0,105,3225	0/0:17,0:17:33.10:0,33,1066	0/0:25,0:25:32.89:0,33,478	0/0:11,0:11:5.64:0,6,89	0/0:13,0:13:10.66:0,11,124	0/1:14,0:14:52.05:52,0,168	1/1:2,15:17:27.09:762,27,0	1/1:2,27:32:87.07:1935,87,0	0/0:29,0:29:60.18:0,60,1997	1/1:0,6:7:20.97:445,21,0
chr10	47398806	.	TGA	T	2819.15	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=10.619;DP=571;FS=3.410;HRun=0;HaplotypeScore=173.3830;InbreedingCoeff=0.9229;MQ=64.83;MQ0=1;MQRankSum=-8.685;QD=9.59;ReadPosRankSum=2.187;VQSLOD=3.4552;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:81.45:0,81,1904	1/1:8,0:8:14.79:98,15,0	0/0:27,0:22:60.55:0,61,733	0/0:16,0:12:25.73:0,26,283	1/1:22,0:22:29.66:197,30,0	1/1:19,2:21:34.42:297,34,0	1/1:22,0:22:16.02:82,16,0	0/0:33,0:31:62.99:0,63,839	1/1:11,0:11:6.09:41,6,0	1/1:22,0:22:59.41:452,59,0	1/1:18,0:18:20.75:137,21,0	1/1:10,0:10:14.20:113,14,0	1/1:18,0:18:8.20:44,8,0	0/0:27,0:27:53.85:0,54,580	1/1:19,0:19:26.60:173,27,0	0/0:25,0:25:75.20:0,75,1147	1/1:20,0:20:20.71:146,21,0	1/1:11,0:11:20.77:139,21,0	0/0:35,0:35:99:0,104,1167	0/0:17,0:17:33.07:0,33,366	0/0:24,0:24:32.66:0,33,280	1/1:10,1:11:5.39:52,5,0	1/1:12,0:12:3.65:48,4,0	1/1:13,1:14:16.53:119,17,0	1/1:17,0:17:26.70:178,27,0	1/1:31,0:31:83.18:578,83,0	0/0:28,0:28:60.13:0,60,676	1/1:7,0:7:20.77:143,21,0
chr10	47398808	.	A	AGTGTGT	6304.02	PASS	AB=0.930;AC=22;AF=0.393;AN=56;BaseQRankSum=-6.564;DP=583;FS=14.504;HRun=0;HaplotypeScore=198.1125;InbreedingCoeff=0.4448;MQ=64.21;MQ0=1;MQRankSum=-5.943;QD=21.08;ReadPosRankSum=-3.160;VQSLOD=3.0952;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:44:99:0,114,2131	0/0:8,0:8:9.03:0,9,125	0/0:27,0:22:9.03:0,9,155	0/0:16,0:12:8.95:0,9,96	0/0:22,0:22:30.10:0,30,412	0/1:22,0:22:99:127,0,121	1/1:24,0:24:25.08:529,25,0	1/1:31,0:29:45.10:784,45,0	0/1:12,0:12:5.49:107,0,5	0/0:22,0:22:42.60:0,43,570	0/0:18,0:18:14.68:0,15,205	0/1:11,0:11:29.64:81,0,30	1/1:17,0:17:2.94:47,3,0	0/1:8,16:29:21.10:892,0,21	0/0:19,0:19:27.09:0,27,376	0/0:25,0:25:51.31:0,51,515	0/0:20,0:20:8.84:0,9,201	0/0:11,0:11:21.07:0,21,293	1/1:20,17:38:63.06:1531,63,0	1/1:3,14:20:12.52:721,13,0	1/1:14,9:26:3.01:40,3,0	0/1:12,0:12:35.13:40,0,35	1/1:12,0:12:2.91:60,3,0	0/1:14,0:14:36.35:109,0,36	0/0:15,0:15:27.09:0,27,369	0/0:30,0:30:57.61:0,58,774	1/1:6,19:31:42.14:1236,42,0	0/0:7,0:7:12.82:0,13,141
chr10	47398839	.	C	CGCGCG	2198.04	PASS	AB=0.956;AC=28;AF=0.500;AN=56;BaseQRankSum=-1.937;DP=502;FS=0.000;HRun=0;HaplotypeScore=201.7020;InbreedingCoeff=0.2031;MQ=52.14;MQ0=0;MQRankSum=-0.114;QD=6.76;ReadPosRankSum=-2.134;VQSLOD=1.7715;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,105,2139	0/1:8,0:8:6.91:7,0,182	1/1:4,0:4:2.90:16,3,0	0/0:5,0:5:2.66:0,3,56	0/0:25,0:25:12.67:0,13,380	1/1:9,3:13:7.67:202,8,0	1/1:17,9:27:36.43:669,36,0	0/1:25,0:23:2.67:3,0,394	1/1:8,2:11:11.14:164,11,0	0/0:21,0:21:33.60:0,34,407	0/0:19,0:19:1.81:0,2,201	1/1:7,2:9:14.05:192,14,0	0/1:10,1:11:18.74:79,0,19	0/1:25,0:25:99:116,0,107	0/0:20,0:20:24.90:0,25,517	0/1:8,0:18:6.87:218,0,7	0/1:24,0:24:7.97:8,0,151	0/0:14,0:14:34.69:0,35,256	0/1:28,0:28:55.77:56,0,321	1/1:16,0:16:25.67:139,26,0	0/1:20,0:20:28.38:28,0,207	1/1:4,2:6:2.94:64,3,0	1/1:10,2:14:8.82:120,9,0	1/1:12,2:15:9.48:158,9,0	0/1:23,0:23:30.79:31,0,297	0/0:29,0:29:42.05:0,42,624	0/1:28,0:28:99:110,0,160	0/0:6,0:6:13.73:0,14,104
chr10	47405969	.	GT	G	3218.91	PASS	AB=0.976;AC=40;AF=0.741;AN=54;BaseQRankSum=-0.676;DP=156;FS=8.073;HRun=1;HaplotypeScore=19.2872;InbreedingCoeff=0.3153;MQ=89.45;MQ0=0;MQRankSum=-0.896;QD=24.20;ReadPosRankSum=1.959;VQSLOD=2.8939;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:8:23.72:0,24,262	1/1:0,4:4:12.04:167,12,0	0/0:6,0:6:18.04:0,18,207	0/0:7,0:7:15.49:0,15,172	./.	1/1:0,7:7:21.07:291,21,0	1/1:1,1:2:6.01:69,6,0	1/1:0,15:15:39.08:475,39,0	1/1:0,2:2:6.02:84,6,0	1/1:4,0:4:1.85:50,2,0	0/0:1,0:1:2.04:0,2,6	1/1:0,6:6:9.03:126,9,0	1/1:2,4:6:18.04:220,18,0	1/1:0,6:6:9.03:126,9,0	1/1:0,16:16:42.14:586,42,0	0/1:5,0:5:8.92:9,0,97	0/1:5,0:5:6.97:14,0,7	0/1:6,0:6:11.54:24,0,12	1/1:0,4:4:12.03:144,12,0	1/1:0,5:5:14.96:184,15,0	1/1:4,7:11:33.07:398,33,0	1/1:0,4:4:9.03:126,9,0	1/1:0,3:3:3.01:42,3,0	1/1:2,0:2:3:27,3,0	0/1:5,1:6:2.45:100,0,2	0/1:7,0:7:5:30,0,5	1/1:3,0:3:8.96:71,9,0	0/1:4,0:4:6.79:16,0,7
chr10	47409094	.	A	AATG	10717.21	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-13.244;DP=695;FS=1.068;HRun=0;HaplotypeScore=93.1966;InbreedingCoeff=0.9998;MQ=87.51;MQ0=0;MQRankSum=-5.650;QD=63.04;ReadPosRankSum=-2.493;VQSLOD=5.7448;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:99:0,99,1821	0/0:15,0:15:45.15:0,45,821	0/0:32,0:32:93.28:0,93,1656	0/0:21,0:21:53.91:0,54,860	0/0:30,0:30:90.31:0,90,1656	0/0:29,0:29:81.28:0,81,1503	0/0:22,0:22:66.23:0,66,1194	1/1:5,28:37:99:2493,108,0	0/0:22,0:22:66.23:0,66,1227	0/0:28,0:28:84.29:0,84,1563	0/0:23,0:23:69.24:0,69,1271	0/0:28,0:28:84.29:0,84,1518	0/0:26,0:26:78.27:0,78,1431	1/1:3,32:37:99:2380,102,0	0/0:28,0:28:84.29:0,84,1566	0/0:29,0:29:84.29:0,84,1560	0/0:30,0:30:84.25:0,84,1502	0/0:18,0:18:54.19:0,54,1007	1/1:3,13:18:48.16:1136,48,0	1/1:2,24:26:66.22:1474,66,0	1/1:2,22:24:60.20:1441,60,0	0/0:21,0:21:63.22:0,63,1161	0/0:16,0:16:48.14:0,48,819	0/0:15,0:15:45.14:0,45,798	0/0:23,0:23:69.24:0,69,1280	0/0:27,0:27:78.27:0,78,1437	1/1:1,26:27:75.26:1792,75,0	0/0:9,0:9:27.05:0,27,437
chr10	47411078	.	G	GA	537.66	PASS	AB=0.952;AC=13;AF=0.232;AN=56;BaseQRankSum=11.601;DP=555;FS=20.139;HRun=9;HaplotypeScore=70.6623;InbreedingCoeff=0.6708;MQ=64.29;MQ0=16;MQRankSum=-0.739;QD=2.95;ReadPosRankSum=0.099;VQSLOD=-0.7223;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:59.92:0,60,511	0/0:5,0:5:8.99:0,9,78	0/0:37,0:8:5.71:0,6,38	0/1:49,0:20:15.12:15,0,69	0/0:26,1:27:59.92:0,60,514	0/0:25,0:25:62.97:0,63,545	0/0:12,0:13:29.01:0,29,240	1/1:20,0:20:19.64:115,20,0	0/0:13,0:13:35.97:0,36,309	0/0:21,0:21:15.10:0,15,310	0/1:15,3:17:9.23:9,0,158	0/0:23,0:23:44.95:0,45,390	0/0:15,0:15:26.97:0,27,234	1/1:19,0:18:30.19:135,30,0	0/0:16,0:16:38.99:0,39,339	0/0:16,0:16:29:0,29,235	0/0:29,0:29:60.85:0,61,674	0/0:18,0:17:41.98:0,42,365	0/1:20,0:20:7.03:76,0,7	1/1:21,0:21:40.31:179,40,0	1/1:8,0:8:5.54:25,6,0	0/0:12,0:12:14.98:0,15,130	0/0:12,0:12:32.99:0,33,286	0/0:16,0:16:38.82:0,39,331	0/0:15,0:15:38.98:0,39,335	0/0:18,0:18:47.97:0,48,414	1/1:26,0:26:35.78:161,36,0	0/0:11,0:11:29.97:0,30,259
chr10	47411084	.	A	AAAG	4634.18	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-6.436;DP=554;FS=12.387;HRun=0;HaplotypeScore=79.5669;InbreedingCoeff=0.9445;MQ=67.65;MQ0=10;MQRankSum=-1.799;QD=36.78;ReadPosRankSum=-0.104;VQSLOD=4.5874;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:66.19:0,66,962	0/0:5,0:5:12.03:0,12,170	0/0:30,0:7:6.26:0,6,62	0/0:49,0:23:14:0,14,240	0/0:25,0:25:72.17:0,72,988	0/0:25,0:25:69.21:0,69,1015	0/0:16,0:16:39.04:0,39,526	1/1:4,21:26:69.13:1141,69,0	0/0:13,0:13:39.12:0,39,548	0/0:19,0:19:51:0,51,699	0/0:15,0:14:14.48:0,14,394	0/0:22,0:22:63.15:0,63,864	0/0:14,0:14:39.09:0,39,509	1/1:2,21:22:33.06:704,33,0	0/0:16,0:16:42.14:0,42,652	0/0:11,0:11:33.08:0,33,442	0/0:31,0:31:92.64:0,93,1352	0/0:18,0:17:48.12:0,48,705	1/1:4,16:21:46.80:775,47,0	1/1:2,21:25:57.04:1061,57,0	1/1:0,6:6:6.02:126,6,0	0/0:10,0:10:27.05:0,27,340	0/0:15,0:15:42.12:0,42,595	0/0:16,0:16:38.40:0,38,606	0/0:16,0:16:42.13:0,42,648	0/0:24,0:24:63.14:0,63,855	1/1:1,22:25:39.04:828,39,0	0/0:12,0:12:36.10:0,36,532
chr10	47411524	.	ACACTCT	A	4462.66	PASS	AB=0.637;AC=32;AF=0.640;AN=50;BaseQRankSum=0.652;DP=562;FS=5.645;HRun=0;HaplotypeScore=120.7805;InbreedingCoeff=0.5447;MQ=72.63;MQ0=30;MQRankSum=-3.026;QD=12.79;ReadPosRankSum=2.512;VQSLOD=2.9576;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:13:29.61:0,30,419	./.	0/0:39,0:27:67.85:0,68,749	0/0:44,0:24:49.99:0,50,528	0/0:0,0:18:0.19:0,0,0	0/0:3,0:21:0:0,0,0	1/1:0,0:17:5.48:59,5,0	1/1:29,0:28:81.46:731,81,0	1/1:11,0:11:32.97:339,33,0	1/1:10,5:15:44.97:620,45,0	./.	0/1:1,0:19:0:0,0,0	1/1:2,0:20:2.58:34,3,0	0/1:1,0:10:0:0,0,0	0/1:1,0:27:0:1,0,0	0/1:22,0:22:99:221,0,322	1/1:3,12:13:12.04:247,12,0	1/1:15,0:14:32.85:370,33,0	1/1:13,0:13:29.37:288,29,0	./.	1/1:2,0:32:2.88:29,3,0	1/1:3,17:19:2.98:21,3,0	0/0:2,11:12:2.37:0,2,32	0/0:3,1:31:2.97:0,3,20	1/1:2,0:22:1.82:5,2,0	1/1:5,20:23:59.50:754,59,0	1/1:0,0:13:8.98:123,9,0	1/1:16,0:14:41.84:620,42,0
chr10	47411566	.	TCACACACACACACA	T	222.90	PASS	AB=0.906;AC=10;AF=0.217;AN=46;BaseQRankSum=2.734;DP=482;FS=2.077;HRun=0;HaplotypeScore=164.3671;InbreedingCoeff=0.5313;MQ=41.00;MQ0=38;MQRankSum=-2.079;QD=2.10;ReadPosRankSum=-1.279;VQSLOD=2.6682;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:18:14.07:0,14,716	0/0:4,0:4:3.01:0,3,110	./.	./.	0/0:21,0:20:2.43:0,2,11	0/0:31,0:29:17.84:0,18,944	0/0:33,0:30:20.36:0,20,942	0/0:11,0:10:20.90:0,21,673	1/1:8,1:9:3.01:115,3,0	0/0:13,0:12:14.42:0,14,186	./.	1/1:19,1:19:0.99:110,1,0	1/1:13,0:13:3.01:97,3,0	0/0:11,0:8:3.01:0,3,162	0/0:25,0:25:10.50:0,11,432	0/0:18,0:18:18.05:0,18,411	0/0:20,0:15:21.02:0,21,371	0/0:10,0:9:9.03:0,9,169	0/0:11,0:11:14.54:0,15,335	./.	0/0:54,0:46:8.09:0,8,283	./.	0/1:14,1:14:0.04:0,0,0	0/1:30,3:28:0.26:0,0,0	1/1:13,0:12:2.37:8,2,0	0/0:17,0:16:26.01:0,26,359	0/0:20,0:20:21.44:0,21,914	0/0:11,0:9:16.77:0,17,201
chr10	47411943	.	CA	C	14993.07	PASS	AB=1.000;AC=39;AF=0.696;AN=56;BaseQRankSum=11.210;DP=720;FS=2.180;HRun=2;HaplotypeScore=226.7547;InbreedingCoeff=0.9414;MQ=79.78;MQ0=0;MQRankSum=-6.568;QD=28.50;ReadPosRankSum=4.250;VQSLOD=4.2590;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:78.19:0,78,1084	1/1:0,5:5:15.04:174,15,0	0/0:15,0:15:42.14:0,42,627	0/0:23,0:23:69.20:0,69,972	1/1:1,22:23:63.19:739,63,0	1/1:3,29:32:69.66:797,70,0	1/1:10,21:31:71.28:805,71,0	0/0:34,0:34:31.79:0,32,337	1/1:1,21:22:48.61:558,49,0	1/1:1,42:43:99:1382,118,0	1/1:0,15:14:33.10:381,33,0	1/1:5,30:35:98.02:1089,98,0	1/1:0,29:29:81.24:956,81,0	0/0:23,0:23:39.12:0,39,305	1/1:0,39:39:99:1147,99,0	1/1:1,30:31:75.22:878,75,0	1/1:4,17:21:45.01:519,45,0	1/1:2,18:20:56.70:657,57,0	0/1:19,0:19:2.69:3,0,170	0/0:17,0:17:17.79:0,18,193	0/0:18,0:18:24.06:0,24,221	1/1:3,29:32:86.01:969,86,0	1/1:0,19:19:45.13:525,45,0	1/1:2,19:21:51.99:573,52,0	1/1:4,26:30:74.18:857,74,0	1/1:0,40:40:99:1329,117,0	0/0:37,0:37:81.88:0,82,552	1/1:0,19:19:57.17:657,57,0
chr10	47413527	.	CTTTT	C	3655.76	PASS	AB=0.800;AC=12;AF=0.214;AN=56;BaseQRankSum=-2.529;DP=604;FS=0.903;HRun=14;HaplotypeScore=103.5740;InbreedingCoeff=0.8271;MQ=65.04;MQ0=6;MQRankSum=0.310;QD=22.29;ReadPosRankSum=5.181;VQSLOD=2.6195;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:28:68.38:0,68,1318	0/0:12,0:15:42.10:0,42,786	0/0:18,0:11:21.99:0,22,311	0/1:15,0:8:0.42:0,0,56	0/0:6,0:25:56.93:0,57,778	0/0:1,0:14:21.06:0,21,370	0/0:4,0:18:36.08:0,36,636	1/1:11,15:26:38.93:510,39,0	0/0:5,0:17:12.04:0,12,229	0/0:6,0:24:60.07:0,60,912	0/0:11,0:24:59.94:0,60,815	0/0:7,0:19:21.06:0,21,412	0/0:19,0:23:51.03:0,51,707	1/1:6,21:27:53.97:696,54,0	0/0:29,0:30:81.19:0,81,1620	0/0:7,0:23:27.08:0,27,468	0/0:4,0:21:21.05:0,21,368	0/0:10,0:27:30.10:0,30,603	1/1:8,14:22:53.96:691,54,0	1/1:8,28:37:83.02:1007,83,0	0/1:3,6:9:11.97:115,0,12	0/0:5,0:13:21.01:0,21,262	0/0:6,0:16:19.76:0,20,421	0/0:6,0:18:18.95:0,19,346	0/0:3,0:30:42.10:0,42,758	0/0:16,0:18:45.12:0,45,768	1/1:5,23:28:44.19:636,44,0	0/0:9,0:16:18.06:0,18,370
chr10	47413814	.	T	TCCAACC	48402.62	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-8.151;DP=650;FS=6.829;HRun=0;HaplotypeScore=117.2163;InbreedingCoeff=0.9992;MQ=65.07;MQ0=0;MQRankSum=-13.229;QD=85.37;ReadPosRankSum=2.489;VQSLOD=6.3158;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,135,3106	1/1:3,13:18:48.16:1670,48,0	0/0:20,0:20:54.18:0,54,1239	0/0:17,0:17:39.13:0,39,806	1/1:1,19:20:54.14:1847,54,0	1/1:3,17:20:51.17:1826,51,0	1/1:8,6:18:36.12:1127,36,0	1/1:11,10:24:61.44:1916,61,0	1/1:7,12:21:54.18:1807,54,0	1/1:5,19:26:75.24:2400,75,0	1/1:4,16:23:60.09:1945,60,0	1/1:7,24:33:84.29:2936,84,0	1/1:11,23:34:93.32:3209,93,0	1/1:7,16:22:63.22:2260,63,0	1/1:4,18:24:63.22:2174,63,0	1/1:4,19:25:69.24:2478,69,0	1/1:6,11:18:45.15:1553,45,0	1/1:10,9:19:42.10:1359,42,0	1/1:6,10:19:54.14:1643,54,0	1/1:5,20:26:72.14:2260,72,0	1/1:8,12:24:45.15:1485,45,0	1/1:3,12:16:42.14:1498,42,0	1/1:3,14:18:48.16:1716,48,0	1/1:4,18:27:48.05:1527,48,0	1/1:3,16:20:48.16:1718,48,0	1/1:7,19:27:69.24:2352,69,0	1/1:5,20:31:81.28:2833,81,0	1/1:0,9:9:24.08:863,24,0
chr10	47414335	.	AGT	A	3716.07	PASS	AB=0.880;AC=26;AF=0.464;AN=56;BaseQRankSum=7.096;DP=670;FS=15.061;HRun=0;HaplotypeScore=105.1305;InbreedingCoeff=0.4953;MQ=59.85;MQ0=14;MQRankSum=2.779;QD=10.68;ReadPosRankSum=3.778;VQSLOD=2.1923;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:39,1:41:46.88:0,47,1082	0/1:8,1:9:19.14:19,0,166	0/0:33,0:16:12.04:0,12,159	0/0:23,0:14:9.50:0,10,136	1/1:6,10:16:18.05:205,18,0	0/1:19,6:26:22.30:195,0,22	1/1:10,14:26:41.78:438,42,0	0/0:35,0:33:48.24:0,48,480	0/0:25,0:25:60.17:0,60,873	1/1:13,13:27:38.03:399,38,0	1/1:6,6:12:18.05:205,18,0	0/0:23,2:25:10.96:0,11,607	0/0:18,0:18:21.07:0,21,323	0/0:24,0:29:6.01:0,6,71	0/1:24,4:28:88.87:89,0,484	1/1:12,13:29:41.45:398,41,0	1/1:5,10:16:29.92:322,30,0	1/1:8,14:22:22:456,22,0	0/0:18,0:17:12.01:0,12,145	0/0:11,0:11:6:0,6,53	0/0:32,0:30:2.69:0,3,38	0/1:18,1:19:15.23:15,0,375	0/1:12,1:13:19.14:19,0,166	0/1:32,5:37:30.39:30,0,823	1/1:14,13:28:41.95:458,42,0	1/1:14,9:26:29.75:302,30,0	0/0:22,0:29:21.38:0,21,177	1/1:5,5:12:17.71:165,18,0
chr10	47417000	.	C	CTGG	9389.81	PASS	AB=0.528;AC=37;AF=0.685;AN=54;BaseQRankSum=5.564;DP=561;FS=2.815;HRun=0;HaplotypeScore=103.2892;InbreedingCoeff=0.7194;MQ=37.13;MQ0=147;MQRankSum=-1.678;QD=26.45;ReadPosRankSum=2.599;VQSLOD=4.9215;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:2:3.01:0,3,56	1/1:10,13:23:43.06:746,43,0	0/0:16,0:3:9.01:0,9,134	0/0:18,0:4:5.64:0,6,59	1/1:4,25:29:50.96:830,51,0	1/1:10,12:11:7.60:310,8,0	1/1:1,6:6:1.23:230,1,0	0/0:19,0:3:5.98:0,6,50	1/1:4,10:6:12.04:197,12,0	1/1:14,23:33:96.06:1360,96,0	1/1:2,15:17:36.12:581,36,0	1/1:5,12:6:17.99:263,18,0	1/1:5,11:6:18.06:296,18,0	0/0:20,0:8:5.97:0,6,52	0/1:2,17:4:0.53:133,0,1	1/1:9,21:17:32.33:584,32,0	1/1:2,4:2:3.01:49,3,0	1/1:0,3:2:6.02:105,6,0	0/0:12,0:4:11.99:0,12,103	0/0:30,0:29:54.01:0,54,691	./.	1/1:7,16:22:45.04:670,45,0	1/1:10,18:27:51.12:788,51,0	1/1:0,1:1:3.01:48,3,0	1/1:7,19:26:38.19:821,38,0	1/1:7,13:17:32.02:661,32,0	0/0:31,0:25:11.43:0,11,124	1/1:2,13:15:45.12:716,45,0
chr10	47417001	.	C	CCT	6820.19	PASS	AB=0.665;AC=32;AF=0.593;AN=54;BaseQRankSum=8.897;DP=590;FS=4.455;HRun=0;HaplotypeScore=115.2524;InbreedingCoeff=0.2575;MQ=36.64;MQ0=148;MQRankSum=-1.890;QD=17.05;ReadPosRankSum=6.865;VQSLOD=4.6734;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:2:3.01:0,3,49	0/1:11,13:24:83.64:481,0,84	0/0:19,0:4:5.99:0,6,66	0/0:19,0:3:2.61:0,3,29	1/1:6,25:31:36.99:588,37,0	0/1:10,12:12:25.83:232,0,26	1/1:5,6:8:23.99:269,24,0	0/1:19,0:3:14.04:14,0,33	1/1:5,10:6:12.04:145,12,0	0/1:18,23:37:98.34:824,0,98	1/1:3,15:18:29.11:418,29,0	0/1:5,12:6:9.87:163,0,10	1/1:5,11:7:20.98:233,21,0	0/0:20,0:8:6.01:0,6,56	1/1:4,17:6:18.04:197,18,0	0/1:8,21:16:29.58:381,0,30	1/1:2,4:2:3.01:36,3,0	1/1:0,3:2:6.02:79,6,0	0/0:11,0:4:11.88:0,12,82	0/0:30,0:29:75.05:0,75,682	./.	0/1:8,16:23:4.68:453,0,5	1/1:9,18:27:17.55:533,18,0	1/1:4,1:3:9.02:96,9,0	1/1:7,19:28:60.18:721,60,0	0/1:9,13:18:19.81:430,0,20	0/0:31,0:25:11.69:0,12,108	1/1:2,13:15:44.72:524,45,0
chr10	47417675	.	G	GA	2463.24	PASS	AB=0.714;AC=15;AF=0.288;AN=52;BaseQRankSum=2.104;DP=524;FS=24.218;HRun=7;HaplotypeScore=115.6907;InbreedingCoeff=0.9089;MQ=40.50;MQ0=19;MQRankSum=-2.923;QD=16.00;ReadPosRankSum=-3.449;VQSLOD=1.4554;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:22:33.84:0,34,314	0/0:11,0:11:17.56:0,18,171	./.	./.	1/1:12,16:28:37.58:414,38,0	0/0:18,0:18:35.96:0,36,335	0/0:23,0:19:30.03:0,30,287	0/0:22,0:21:42.15:0,42,441	0/0:18,0:18:23.89:0,24,225	1/1:11,5:14:21:223,21,0	1/1:8,9:16:25.97:263,26,0	0/0:25,0:24:39.67:0,40,370	0/0:17,0:17:29.93:0,30,289	0/0:26,0:26:18.26:0,18,315	0/0:24,0:24:38.72:0,39,357	0/0:24,0:24:54.21:0,54,545	1/1:11,11:22:28.23:304,28,0	0/1:6,4:9:7.92:152,0,8	0/0:21,0:19:32.97:0,33,305	0/0:22,0:21:41.98:0,42,392	0/0:21,0:19:17.98:0,18,172	0/0:8,0:8:17.85:0,18,154	0/0:8,0:8:14.96:0,15,133	0/0:29,1:27:29.84:0,30,289	1/1:8,10:18:30.08:350,30,0	1/1:8,15:22:52.63:587,53,0	0/0:24,0:22:24.81:0,25,321	1/1:17,3:16:40.38:365,40,0
chr10	47419359	.	G	GTA	1029.38	PASS	AC=22;AF=0.500;AN=44;BaseQRankSum=1.117;DP=182;FS=15.537;HRun=0;HaplotypeScore=45.5966;InbreedingCoeff=0.6519;MQ=54.46;MQ0=3;MQRankSum=-3.352;QD=16.08;ReadPosRankSum=1.814;VQSLOD=1.9591;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:18.04:0,18,211	./.	./.	0/0:13,0:4:4.83:0,5,41	1/1:5,0:5:9.02:120,9,0	1/1:2,0:2:1.55:4,2,0	./.	0/0:36,0:35:83.05:0,83,876	0/0:4,0:4:2.95:0,3,24	1/1:2,0:2:6.02:96,6,0	./.	0/0:2,0:2:3:0,3,25	1/1:6,0:6:2.99:24,3,0	0/0:2,0:2:3.01:0,3,37	1/1:1,0:1:3:25,3,0	1/1:2,0:2:4.07:11,4,0	1/1:9,4:13:16.30:233,16,0	1/1:5,11:16:18.06:277,18,0	0/0:11,0:11:21.95:0,22,257	0/0:5,0:5:9.03:0,9,108	0/0:6,0:6:12.04:0,12,146	./.	./.	0/0:4,0:4:2.22:0,2,7	1/1:3,1:4:5.75:59,6,0	1/1:3,0:3:6.02:82,6,0	0/0:13,0:13:30.09:0,30,364	1/1:2,7:10:18.06:255,18,0
chr10	47419370	.	CATAT	C	1911.73	PASS	AB=1.000;AC=13;AF=0.283;AN=46;BaseQRankSum=-4.444;DP=174;FS=7.464;HRun=0;HaplotypeScore=46.6718;InbreedingCoeff=0.5838;MQ=58.52;MQ0=2;MQRankSum=2.293;QD=24.20;ReadPosRankSum=0.166;VQSLOD=2.0606;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:9:26.88:0,27,504	./.	./.	0/0:12,0:5:4.97:0,5,18	./.	0/0:2,0:2:3.01:0,3,44	./.	1/1:10,27:36:75.15:1036,75,0	0/0:3,0:3:6:0,6,99	0/0:2,0:2:0:0,0,0	0/1:3,0:3:0:0,0,0	0/0:2,0:2:3.01:0,3,76	0/0:3,0:3:3.01:0,3,76	1/1:0,3:3:3.01:52,3,0	0/0:2,0:2:2.97:0,3,20	0/0:4,0:4:9.03:0,9,209	0/0:11,0:12:8.19:0,8,103	0/0:11,0:14:20.97:0,21,298	1/1:3,9:12:24.05:330,24,0	1/1:0,3:3:8.99:124,9,0	1/1:0,7:7:12.04:207,12,0	./.	0/0:2,0:2:3.01:0,3,49	0/0:2,0:2:3.01:0,3,69	0/0:2,0:3:5.94:0,6,42	0/0:1,0:2:3.01:0,3,52	1/1:4,10:14:18.06:311,18,0	0/0:6,0:10:19:0,19,292
chr10	47419677	.	TA	T	1420.74	PASS	AC=12;AF=0.353;AN=34;BaseQRankSum=-8.152;DP=268;FS=1.260;HRun=10;HaplotypeScore=69.7208;InbreedingCoeff=0.9584;MQ=70.68;MQ0=15;MQRankSum=-0.518;QD=16.52;ReadPosRankSum=-0.532;VQSLOD=3.8638;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:23:60.15:0,60,655	./.	0/0:23,0:9:10.32:0,10,155	0/0:27,0:11:15.16:0,15,140	0/0:12,0:12:30.19:0,30,135	./.	./.	1/1:8,26:28:77.95:671,78,0	./.	0/0:15,0:14:30.19:0,30,135	0/0:9,0:9:21.96:0,22,98	./.	./.	1/1:4,8:12:15:130,15,0	./.	./.	0/0:25,0:25:52.15:0,52,233	0/0:12,0:11:21.96:0,22,98	1/1:2,17:17:41.97:364,42,0	1/1:0,5:5:14.96:124,15,0	1/1:1,3:4:9:78,9,0	./.	./.	./.	0/0:15,0:15:38.42:0,38,172	0/0:12,0:12:24.04:0,24,126	1/1:2,10:12:23.99:208,24,0	0/0:7,0:7:19.15:0,19,84
chr10	47419684	.	A	AAT	4766.39	PASS	AC=16;AF=0.471;AN=34;BaseQRankSum=-10.385;DP=271;FS=6.253;HRun=0;HaplotypeScore=60.3037;InbreedingCoeff=0.9806;MQ=77.23;MQ0=6;MQRankSum=0.596;QD=40.74;ReadPosRankSum=2.266;VQSLOD=6.2551;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:60.19:0,60,850	./.	0/0:26,0:12:29.93:0,30,359	0/0:27,0:12:24.86:0,25,335	1/1:4,11:15:38.95:620,39,0	./.	./.	0/0:31,0:30:82.32:0,82,599	./.	1/1:1,12:12:36.11:596,36,0	1/1:0,11:11:32.83:464,33,0	./.	./.	0/0:9,0:9:17.92:0,18,137	./.	./.	1/1:0,25:25:57.19:982,57,0	1/1:1,10:10:24.08:414,24,0	0/0:20,0:18:46:0,46,335	0/0:6,0:6:17.89:0,18,131	0/0:3,0:3:8.95:0,9,66	./.	./.	./.	1/1:0,17:18:42.14:726,42,0	1/1:0,12:12:36.12:603,36,0	0/0:11,0:11:26.87:0,27,203	1/1:0,11:12:21.07:361,21,0
chr10	47420393	.	AT	A	1671.34	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.004;DP=646;FS=5.394;HRun=2;HaplotypeScore=64.2464;InbreedingCoeff=0.9965;MQ=75.44;MQ0=0;MQRankSum=-2.541;QD=35.56;ReadPosRankSum=2.622;VQSLOD=4.2824;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:33.09:0,33,472	1/1:0,7:7:21.07:273,21,0	0/0:10,0:10:30.08:0,30,402	0/0:17,0:17:47.99:0,48,648	0/0:26,0:26:78.26:0,78,1153	0/0:24,0:24:72.24:0,72,1077	0/0:24,0:24:72.24:0,72,1079	0/0:39,0:39:99:0,108,1583	0/0:26,0:26:78.26:0,78,1169	0/0:25,0:25:75.24:0,75,1099	0/0:24,0:24:72.24:0,72,1079	0/0:23,0:23:69.22:0,69,1010	0/0:25,0:25:75.25:0,75,1123	0/0:19,0:19:57.19:0,57,854	1/1:0,40:40:99:1519,117,0	0/0:29,0:29:84.28:0,84,1259	0/0:21,0:21:60.19:0,60,879	0/0:22,0:22:66.22:0,66,989	0/0:17,0:17:48.16:0,48,720	0/0:36,0:36:99:0,108,1599	0/0:21,0:21:63.21:0,63,944	0/0:25,0:25:72.24:0,72,1074	0/0:26,0:26:75.23:0,75,1083	0/0:17,0:17:51.17:0,51,761	0/0:30,0:30:90.28:0,90,1327	0/0:25,0:25:75.25:0,75,1123	0/0:28,0:28:84.28:0,84,1259	0/0:8,0:8:24.08:0,24,360
chr10	47423807	.	CG	C	11679.36	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=8.616;DP=607;FS=8.099;HRun=5;HaplotypeScore=64.3347;InbreedingCoeff=0.9940;MQ=81.49;MQ0=0;MQRankSum=-2.291;QD=30.34;ReadPosRankSum=6.829;VQSLOD=4.5840;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:90.29:0,90,1213	1/1:2,8:10:24.07:272,24,0	0/0:20,0:20:53.71:0,54,626	0/0:19,0:18:20.59:0,21,416	1/1:0,20:20:54.15:611,54,0	1/1:0,16:16:42.12:476,42,0	1/1:0,25:25:63.18:715,63,0	0/0:32,0:32:87.25:0,87,1139	1/1:2,16:18:48.14:544,48,0	1/1:2,22:24:66.19:748,66,0	1/1:2,12:14:39.11:441,39,0	1/1:5,29:34:85.79:954,86,0	1/1:2,19:21:60.17:677,60,0	0/0:28,0:28:81.25:0,81,1077	1/1:1,28:29:75.21:850,75,0	1/1:0,17:17:48.14:544,48,0	1/1:0,30:30:81.23:919,81,0	1/1:0,34:34:90.26:1021,90,0	0/0:13,0:13:39.13:0,39,532	0/0:19,0:19:54.16:0,54,717	0/0:45,0:45:99:0,123,1616	1/1:1,13:14:39.11:442,39,0	1/1:0,10:10:30.09:340,30,0	1/1:2,26:28:72.20:808,72,0	1/1:0,18:18:51.15:578,51,0	1/1:0,19:19:54.15:612,54,0	0/0:13,0:13:39.10:0,39,498	1/1:1,3:4:12.03:129,12,0
chr10	47423812	.	GT	G	2889.26	PASS	AB=1.000;AC=33;AF=0.589;AN=56;BaseQRankSum=17.159;DP=640;FS=0.608;HRun=1;HaplotypeScore=95.3836;InbreedingCoeff=0.6219;MQ=80.86;MQ0=0;MQRankSum=-3.881;QD=7.13;ReadPosRankSum=10.261;VQSLOD=-0.3835;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,105,1434	1/1:8,0:8:20.27:75,20,0	0/0:27,0:26:61.95:0,62,858	0/0:20,0:17:32.34:0,32,523	1/1:20,0:20:47.74:215,48,0	0/1:19,0:19:23.94:119,0,24	1/1:26,0:26:19.57:146,20,0	0/0:32,0:32:96.27:0,96,1384	0/1:22,0:22:88.53:104,0,89	1/1:23,0:23:24.61:188,25,0	1/1:13,1:14:29.59:162,30,0	1/1:33,1:34:8.29:247,8,0	1/1:20,1:21:35.14:218,35,0	0/0:29,0:29:87.20:0,87,1278	1/1:32,0:32:15.36:197,15,0	0/1:20,0:20:24.51:92,0,25	1/1:32,0:32:28.66:259,29,0	1/1:35,0:35:55.73:265,56,0	0/0:16,0:16:48.11:0,48,655	0/0:21,0:21:60.18:0,60,878	0/0:41,0:41:99:0,120,1768	1/1:14,0:14:12.44:136,12,0	1/1:11,0:11:5.06:107,5,0	1/1:27,2:29:42.60:268,43,0	0/1:20,0:19:2.01:132,0,2	0/1:21,0:21:15.96:97,0,16	0/0:14,0:14:39.08:0,39,557	1/1:3,1:4:10.88:72,11,0
chr10	47424947	.	AT	A	7029.46	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=13.905;DP=588;FS=3.234;HRun=3;HaplotypeScore=56.4441;InbreedingCoeff=0.9989;MQ=78.44;MQ0=0;MQRankSum=-2.048;QD=33.80;ReadPosRankSum=3.829;VQSLOD=5.3886;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:69.23:0,69,990	1/1:0,9:9:21.07:260,21,0	0/0:21,0:21:63.19:0,63,872	0/0:8,0:8:24.08:0,24,345	0/0:22,0:22:66.19:0,66,898	1/1:1,19:20:57.18:707,57,0	1/1:0,12:12:30.09:372,30,0	0/0:35,0:35:99:0,105,1498	1/1:0,12:12:36.11:446,36,0	0/0:30,0:30:90.30:0,90,1296	0/0:24,0:24:72.22:0,72,1015	1/1:1,30:31:81.25:1004,81,0	1/1:2,26:28:72.23:893,72,0	0/0:26,0:26:78.26:0,78,1122	1/1:0,28:28:81.25:1004,81,0	1/1:0,29:29:81.25:1004,81,0	0/0:19,0:19:54.14:0,54,753	0/0:11,0:11:33.08:0,33,454	0/0:28,0:28:78.25:0,78,1093	0/0:23,0:23:66.22:0,66,947	0/0:10,0:10:30.10:0,30,432	1/1:0,12:12:36.11:446,36,0	1/1:0,14:14:39.12:484,39,0	1/1:1,12:13:33.10:409,33,0	0/0:33,0:33:96.31:0,96,1350	0/0:22,0:22:63.20:0,63,875	0/0:30,0:30:87.29:0,87,1253	0/0:15,0:15:45.10:0,45,589
chr10	47427567	.	T	TA	2968.54	PASS	AB=0.680;AC=9;AF=0.161;AN=56;BaseQRankSum=3.511;DP=707;FS=44.855;HRun=2;HaplotypeScore=100.3345;InbreedingCoeff=0.0649;MQ=69.16;MQ0=0;MQRankSum=-10.625;QD=14.62;ReadPosRankSum=-2.454;VQSLOD=0.3967;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:84.25:0,84,1025	0/0:10,0:10:27.08:0,27,335	0/0:31,0:31:63.35:0,63,859	0/0:24,0:23:56.68:0,57,651	0/1:25,15:40:99:435,0,472	0/0:28,0:28:78.23:0,78,948	0/0:32,0:32:87.24:0,87,1053	0/0:19,0:19:48.14:0,48,585	0/0:13,0:13:39.11:0,39,470	0/1:19,18:37:99:609,0,564	0/1:11,9:20:99:201,0,237	0/0:34,0:34:96.25:0,96,1159	0/0:32,0:32:90.26:0,90,1096	0/0:34,0:34:93.29:0,93,1153	0/0:30,0:30:87.27:0,87,1078	0/0:26,0:26:78.25:0,78,967	0/1:11,13:24:99:449,0,172	0/1:7,8:15:47.19:275,0,47	0/0:14,0:14:42.12:0,42,506	0/0:13,0:13:36.11:0,36,442	0/0:24,0:24:69.20:0,69,842	0/0:29,0:29:81.17:0,81,944	0/0:18,0:18:54.16:0,54,656	0/0:35,0:35:99:0,105,1283	0/1:19,14:33:99:413,0,587	0/1:14,14:28:99:518,0,435	0/0:25,0:25:75.22:0,75,916	1/1:1,5:6:14.02:214,14,0
chr10	47429396	.	GACACACAC	G	2730.95	PASS	AB=0.831;AC=25;AF=0.446;AN=56;BaseQRankSum=-2.051;DP=460;FS=2.302;HRun=0;HaplotypeScore=131.6220;InbreedingCoeff=0.4176;MQ=67.42;MQ0=23;MQRankSum=-2.684;QD=11.98;ReadPosRankSum=1.752;VQSLOD=2.7149;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:39:50.80:0,51,951	0/0:8,0:5:2.13:0,2,104	0/0:26,0:16:9.03:0,9,113	0/0:23,0:17:12.04:0,12,152	0/0:7,0:13:25.78:0,26,240	1/1:5,10:15:20.10:435,20,0	1/1:18,8:23:15.20:278,15,0	0/0:24,0:21:16.45:0,16,112	1/1:12,1:12:20.97:416,21,0	0/1:13,0:12:10.39:94,0,10	0/0:8,0:9:14.49:0,14,96	1/1:13,2:15:17.22:250,17,0	1/1:7,2:8:14.08:265,14,0	0/0:11,0:9:3.74:0,4,12	0/0:17,0:16:2.78:0,3,51	0/1:11,1:12:13.03:288,0,13	0/0:14,0:18:5.65:0,6,131	0/1:9,0:10:12.46:12,0,61	1/1:14,0:13:3.60:47,4,0	0/0:6,0:13:6.10:0,6,30	0/0:27,0:25:15.76:0,16,151	1/1:5,3:10:12.40:241,12,0	1/1:9,2:11:21.53:402,22,0	1/1:13,10:22:5.89:109,6,0	0/1:9,0:15:17.24:17,0,191	0/1:8,0:10:3.69:4,0,121	0/1:18,0:18:3.13:57,0,3	0/1:4,0:7:1.44:1,0,86
chr10	47429420	.	C	CA	1095.84	PASS	AB=0.893;AC=13;AF=0.232;AN=56;BaseQRankSum=1.542;DP=621;FS=8.393;HRun=1;HaplotypeScore=135.2276;InbreedingCoeff=-0.2983;MQ=39.21;MQ0=107;MQRankSum=-0.594;QD=3.52;ReadPosRankSum=4.459;VQSLOD=0.0749;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:34:59.82:0,60,632	0/0:11,0:4:12:0,12,135	0/0:10,0:4:12.04:0,12,153	0/0:11,0:5:15.05:0,15,191	0/0:26,0:23:37.95:0,38,385	0/0:24,0:21:16.72:0,17,209	0/1:33,1:29:98.77:99,0,267	0/1:23,6:25:99:175,0,355	0/1:19,2:17:23.42:23,0,260	0/0:29,0:20:23.69:0,24,343	0/0:13,0:11:9.98:0,10,211	0/1:20,0:19:54.93:55,0,127	0/1:13,0:12:4.74:5,0,109	0/1:23,1:17:65.90:66,0,82	0/0:22,0:17:14.83:0,15,124	0/1:16,2:17:68.47:68,0,105	0/0:27,0:22:41.32:0,41,343	0/0:21,0:18:26.35:0,26,240	0/1:15,2:10:69.45:69,0,170	0/1:20,1:17:61.83:83,0,62	0/1:29,10:26:49.18:286,0,49	0/0:14,0:12:8.45:0,8,94	0/1:15,1:18:4.79:5,0,123	0/1:30,0:26:9.86:10,0,93	0/0:24,0:21:37.18:0,37,340	0/0:25,1:17:23.31:0,23,395	0/1:13,7:19:99:300,0,251	0/0:11,0:9:14.33:0,14,89
chr10	47429426	.	CACACACA	C	1070.66	PASS	AB=1.000;AC=18;AF=0.346;AN=52;BaseQRankSum=3.004;DP=624;FS=25.873;HRun=0;HaplotypeScore=169.2328;InbreedingCoeff=-0.2139;MQ=37.70;MQ0=117;MQRankSum=-3.906;QD=3.06;ReadPosRankSum=2.173;VQSLOD=0.8378;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:32:46.31:0,46,746	1/1:10,1:4:3.01:57,3,0	./.	./.	0/0:26,0:23:29.52:0,30,263	0/1:24,0:21:99:152,0,156	0/1:29,0:24:99:108,0,148	0/0:31,0:27:65.62:0,66,754	0/1:25,0:19:99:113,0,210	0/1:30,0:17:87.85:88,0,238	0/0:10,0:9:11.66:0,12,104	0/1:23,0:19:56.03:56,0,91	0/1:15,0:14:72.71:76,0,73	0/0:24,0:15:13.59:0,14,185	1/1:15,6:16:13.59:163,14,0	0/1:20,0:17:90.73:91,0,144	0/0:27,0:22:8.76:0,9,271	0/1:22,0:18:54.66:55,0,134	0/0:19,0:11:1.90:0,2,214	0/1:21,0:17:0.18:0,0,70	0/0:38,0:26:31.08:0,31,288	0/1:17,0:14:64.19:98,0,64	0/1:21,0:19:28.56:120,0,29	0/1:32,0:26:26.20:37,0,26	0/0:25,0:22:21.12:0,21,224	0/1:28,0:19:3.65:4,0,311	0/0:19,0:17:17.45:0,17,385	0/1:11,0:9:5.25:5,0,38
chr10	47429439	.	CACACACA	C	1087.41	PASS	AB=0.958;AC=19;AF=0.365;AN=52;BaseQRankSum=-0.190;DP=599;FS=0.000;HRun=0;HaplotypeScore=179.7142;InbreedingCoeff=-0.4689;MQ=36.87;MQ0=115;MQRankSum=-3.790;QD=2.92;ReadPosRankSum=-1.720;VQSLOD=2.2168;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:29:46.54:0,47,821	1/1:8,0:1:2.60:10,3,0	./.	./.	0/1:23,2:21:70.91:71,0,313	0/0:24,0:21:3.62:0,4,370	0/0:28,0:23:24.14:0,24,240	0/0:30,0:27:59.99:0,60,756	0/1:19,4:18:82.14:82,0,176	0/0:30,0:18:38.81:0,39,514	0/1:10,0:7:25.56:26,0,138	0/1:23,1:19:71.58:128,0,72	0/1:9,3:13:86.29:139,0,86	0/1:27,0:19:8.10:8,0,92	0/0:21,0:15:4.56:0,5,20	0/1:20,0:17:55.13:55,0,147	0/1:27,0:22:64.13:64,0,327	0/1:20,0:16:16.82:17,0,188	0/1:18,0:11:89.86:90,0,113	0/0:19,0:16:9.77:0,10,61	0/0:38,0:26:16.37:0,16,100	0/1:19,1:16:76.64:77,0,83	0/1:16,2:16:11.08:192,0,11	0/1:32,0:25:51.26:51,0,102	0/1:25,0:21:16.51:17,0,226	0/1:26,0:18:99:119,0,516	0/1:21,0:18:62.23:62,0,113	0/1:13,0:11:30.34:30,0,234
chr10	47429446	.	AACAC	A	1110.87	PASS	AB=0.952;AC=15;AF=0.300;AN=50;BaseQRankSum=0.901;DP=610;FS=0.000;HRun=0;HaplotypeScore=169.1928;InbreedingCoeff=0.4038;MQ=37.43;MQ0=111;MQRankSum=-3.212;QD=4.96;ReadPosRankSum=-2.370;VQSLOD=2.2982;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:30:22.14:0,22,407	./.	./.	./.	0/0:21,0:22:0.73:0,1,332	0/0:26,0:23:32.25:0,32,462	0/0:24,0:20:26.45:0,26,360	0/0:28,0:25:16.53:0,17,171	0/0:20,0:17:10.70:0,11,240	0/0:27,0:17:21.05:0,21,325	0/0:11,0:9:4.53:0,5,56	0/1:19,0:17:9.29:9,0,136	0/1:13,0:13:13.47:13,0,150	0/1:22,9:24:11.53:219,0,12	1/1:22,0:17:14.16:60,14,0	0/1:20,0:17:27.97:28,0,103	0/0:24,0:24:24.04:0,24,324	0/0:14,0:17:12.02:0,12,167	1/1:17,1:13:9.79:150,10,0	1/1:16,4:17:19.82:193,20,0	1/1:32,1:22:12.63:100,13,0	0/0:20,0:18:11.96:0,12,208	0/1:17,0:17:44.46:44,0,76	0/0:26,0:24:8.93:0,9,108	0/0:19,0:25:11.62:0,12,167	0/0:23,0:18:2.89:0,3,248	1/1:12,9:17:33.08:462,33,0	0/0:9,0:12:9.91:0,10,86
chr10	47430705	.	GTA	G	20343.18	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=8.269;DP=579;FS=7.601;HRun=0;HaplotypeScore=75.9044;InbreedingCoeff=0.9956;MQ=80.14;MQ0=2;MQRankSum=-4.159;QD=44.22;ReadPosRankSum=3.021;VQSLOD=6.5422;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,160,3174	0/0:8,0:8:24.08:0,24,485	0/0:12,0:12:36.07:0,36,669	0/0:22,0:22:57.19:0,57,1111	1/1:0,20:20:57.19:929,57,0	1/1:0,28:28:81.28:1321,81,0	1/1:0,27:27:78.27:1271,78,0	1/1:0,22:22:66.18:1005,66,0	1/1:0,14:14:36.12:587,36,0	1/1:0,17:17:51.17:827,51,0	1/1:0,19:19:51.17:830,51,0	1/1:0,21:21:51.17:832,51,0	1/1:0,21:21:57.19:930,57,0	1/1:0,16:16:48.16:783,48,0	0/0:24,0:24:72.25:0,72,1462	1/1:0,16:16:48.16:783,48,0	1/1:0,26:26:69.24:1126,69,0	1/1:0,19:19:57.19:930,57,0	1/1:0,12:12:33.07:510,33,0	1/1:0,19:19:48.16:783,48,0	1/1:0,41:40:99:1811,111,0	1/1:0,19:18:48.16:783,48,0	1/1:0,14:14:29.88:489,30,0	1/1:0,18:19:45.15:731,45,0	1/1:0,18:18:48.16:783,48,0	1/1:0,22:22:66.23:1076,66,0	1/1:0,22:22:60.20:979,60,0	1/1:0,8:8:15.05:245,15,0
chr10	47430825	.	G	GA	5096.14	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-15.132;DP=560;FS=3.098;HRun=8;HaplotypeScore=69.9550;InbreedingCoeff=0.9791;MQ=77.89;MQ0=0;MQRankSum=-1.882;QD=27.85;ReadPosRankSum=2.667;VQSLOD=5.5897;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:71.94:0,72,652	0/0:4,0:4:9:0,9,82	0/0:22,0:20:13.55:0,14,339	0/0:24,0:23:37.69:0,38,309	0/0:18,0:18:51.03:0,51,466	1/1:1,18:19:48.14:554,48,0	1/1:2,21:24:63.02:707,63,0	0/0:27,0:27:68.99:0,69,628	1/1:2,18:20:42.12:485,42,0	0/0:16,0:15:39.02:0,39,357	0/0:25,0:25:66.03:0,66,603	1/1:4,20:24:57.17:658,57,0	1/1:0,22:22:54.16:623,54,0	0/0:19,0:19:41.99:0,42,379	0/0:22,0:22:66.04:0,66,604	1/1:0,15:15:39.12:450,39,0	0/0:29,0:29:84.04:0,84,768	0/0:13,0:13:39.02:0,39,357	0/0:22,0:22:57.03:0,57,521	0/0:21,0:21:47.98:0,48,439	0/0:20,0:20:57.01:0,57,520	1/1:2,15:17:17.63:442,18,0	1/1:1,15:16:33.10:381,33,0	1/1:0,26:26:69.21:796,69,0	0/0:16,3:19:10.41:0,10,350	0/0:19,0:19:31.66:0,32,469	0/0:15,0:14:38.97:0,39,347	0/0:12,0:12:33.01:0,33,302
chr10	47431665	.	CCCTA	C	1586.21	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.410;DP=706;FS=1.449;HRun=0;HaplotypeScore=111.9750;InbreedingCoeff=0.9977;MQ=77.94;MQ0=0;MQRankSum=-3.213;QD=37.77;ReadPosRankSum=1.720;VQSLOD=3.6368;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,114,2986	1/1:0,8:8:21.07:381,21,0	0/0:22,0:22:57.20:0,57,1372	0/0:38,0:38:99:0,102,2331	0/0:20,0:20:57.20:0,57,1492	0/0:23,0:23:63.22:0,63,1650	0/0:35,0:35:99:0,105,2531	0/0:26,0:26:69.24:0,69,1793	0/0:30,0:30:81.28:0,81,2077	0/0:22,0:22:60.21:0,60,1531	0/0:15,0:15:39.13:0,39,950	0/0:30,0:30:84.29:0,84,2189	0/0:20,0:20:60.21:0,60,1570	0/0:34,0:34:93.32:0,93,2375	1/1:3,31:34:75.25:1326,75,0	0/0:30,0:30:84.29:0,84,2163	0/0:35,0:35:99:0,99,2523	0/0:23,0:23:63.19:0,63,1591	0/0:14,0:14:33.11:0,33,791	0/0:16,0:16:45.15:0,45,1141	0/0:41,0:41:99:0,114,2873	0/0:15,0:15:45.15:0,45,1148	0/0:25,0:25:72.21:0,72,1647	0/0:33,0:33:93.32:0,93,2374	0/0:19,0:19:54.19:0,54,1415	0/0:21,0:21:63.22:0,63,1641	0/0:23,0:23:63.22:0,63,1631	0/0:16,0:16:45.15:0,45,1175
chr10	47432707	.	G	GA	1841.04	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-7.619;DP=772;FS=4.980;HRun=6;HaplotypeScore=98.7448;InbreedingCoeff=0.9999;MQ=61.84;MQ0=0;MQRankSum=1.566;QD=34.74;ReadPosRankSum=1.945;VQSLOD=2.6546;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,104,1061	1/1:0,13:13:36.12:453,36,0	0/0:24,0:21:44.76:0,45,448	0/0:21,0:19:41.76:0,42,428	0/0:24,0:24:69.15:0,69,703	0/0:38,0:38:99:0,99,1003	0/0:22,0:22:54.05:0,54,528	0/0:29,0:29:78.15:0,78,786	0/0:32,0:32:93.19:0,93,941	0/0:35,0:35:99:0,102,1041	0/0:22,0:22:60.14:0,60,612	0/0:26,0:26:69.16:0,69,704	0/0:28,0:28:81.18:0,81,822	0/0:32,0:32:93.19:0,93,941	1/1:0,40:40:99:1510,120,0	0/0:24,0:24:57.10:0,57,575	0/0:24,0:24:72.16:0,72,734	0/0:25,0:25:60.08:0,60,601	0/0:22,0:22:54.12:0,54,551	0/0:42,0:42:99:0,111,1133	0/0:16,0:16:45.08:0,45,452	0/0:27,0:27:75.15:0,75,758	0/0:31,0:31:90.18:0,90,910	0/0:16,0:16:45.07:0,45,450	0/0:27,0:27:75.17:0,75,765	0/0:33,0:33:90.20:0,90,918	0/0:41,0:41:99:0,117,1193	0/0:21,0:21:53.59:0,54,550
chr10	47433766	.	T	TA	1083.34	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-6.904;DP=579;FS=1.461;HRun=6;HaplotypeScore=80.3566;InbreedingCoeff=0.9698;MQ=62.93;MQ0=1;MQRankSum=0.535;QD=28.51;ReadPosRankSum=0.388;VQSLOD=4.1756;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:69.15:0,69,704	1/1:2,9:11:27.09:337,27,0	0/0:21,0:19:44.92:0,45,434	0/0:19,0:16:39.04:0,39,386	0/0:22,0:22:57.11:0,57,574	0/0:22,0:22:60.13:0,60,612	0/0:12,0:13:36:0,36,354	0/0:30,0:30:81.16:0,81,815	0/0:16,0:16:33.07:0,33,337	0/0:18,0:18:51.10:0,51,516	0/0:19,0:18:51.10:0,51,513	0/0:27,0:27:57.05:0,57,557	0/0:15,0:15:45.08:0,45,451	0/0:19,0:19:54.11:0,54,544	1/1:1,26:27:69.22:868,69,0	0/0:27,0:27:75.17:0,75,765	0/0:35,0:35:94.41:0,94,936	0/0:27,0:27:69.12:0,69,693	0/0:23,0:23:57.09:0,57,564	0/0:20,0:20:54.11:0,54,544	0/0:15,0:15:45.10:0,45,459	0/0:14,0:14:33.07:0,33,337	0/0:23,0:23:57.10:0,57,573	0/0:17,0:17:36.07:0,36,367	0/0:16,0:16:45.10:0,45,459	0/0:30,0:30:81.18:0,81,826	0/0:24,0:24:63.11:0,63,634	0/0:4,0:4:9.02:0,9,92
chr10	47433781	.	G	GA	5372.61	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-13.203;DP=605;FS=9.176;HRun=8;HaplotypeScore=66.4089;InbreedingCoeff=0.9941;MQ=65.26;MQ0=1;MQRankSum=0.318;QD=27.84;ReadPosRankSum=1.922;VQSLOD=5.1830;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:71.97:0,72,649	0/0:8,0:8:20.99:0,21,186	0/0:16,0:15:25.12:0,25,225	0/0:18,0:16:32.93:0,33,291	0/0:24,0:24:66.01:0,66,595	1/1:2,26:28:72.21:831,72,0	1/1:4,14:18:42.06:459,42,0	0/0:36,0:36:93.02:0,93,844	1/1:1,20:21:48.14:554,48,0	0/0:20,0:20:51.02:0,51,467	0/0:21,0:20:60.01:0,60,542	1/1:0,24:24:60.18:692,60,0	1/1:1,15:16:45.13:518,45,0	0/0:19,0:19:51.02:0,51,466	0/0:30,0:30:72.01:0,72,655	1/1:2,25:27:72.21:831,72,0	0/0:36,0:36:94.82:0,95,850	0/0:27,0:27:75.04:0,75,686	0/0:18,0:18:54.02:0,54,491	0/0:21,0:21:63.01:0,63,570	0/0:15,0:15:42.02:0,42,384	1/1:3,14:17:42.12:483,42,0	1/1:6,19:25:51.15:589,51,0	1/1:3,14:17:36.11:416,36,0	0/0:15,0:15:45:0,45,405	0/0:32,0:32:74.21:0,74,722	0/0:25,0:25:62.97:0,63,562	0/0:5,0:5:11.98:0,12,103
chr10	47435049	.	C	CAT	4193.67	PASS	AB=0.727;AC=21;AF=0.389;AN=54;BaseQRankSum=-2.501;DP=545;FS=7.083;HRun=0;HaplotypeScore=142.3065;InbreedingCoeff=0.4266;MQ=52.86;MQ0=4;MQRankSum=0.493;QD=15.59;ReadPosRankSum=-2.059;VQSLOD=2.9733;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:63.18:0,63,787	0/0:16,0:16:15.05:0,15,191	0/0:7,0:4:5.76:0,6,76	0/0:11,0:6:6.02:0,6,76	0/0:30,0:30:29.67:0,30,323	0/1:13,17:29:99:221,0,120	0/1:9,4:12:40.99:41,0,54	1/1:29,37:66:99:1960,127,0	0/1:16,7:23:38.07:38,0,74	0/0:18,0:16:38.93:0,39,409	0/0:17,0:17:26.56:0,27,310	1/1:4,5:9:5.84:100,6,0	0/1:7,7:14:46.39:226,0,46	1/1:3,1:19:23.01:196,23,0	0/0:20,0:20:15.03:0,15,177	0/1:10,9:20:0.70:326,0,1	0/0:28,0:28:33.54:0,34,387	0/0:22,0:22:32.97:0,33,351	1/1:4,0:20:42.02:578,42,0	1/1:0,0:17:25.24:169,25,0	1/1:6,3:9:9.03:150,9,0	0/1:4,2:6:17.80:44,0,18	./.	0/1:4,1:5:31.91:44,0,32	0/0:21,0:21:21.07:0,21,266	0/0:22,0:22:59.95:0,60,653	1/1:3,0:15:9.91:100,10,0	0/0:25,0:24:51.02:0,51,570
chr10	47435053	.	T	TAC	3070.73	PASS	AB=1.000;AC=25;AF=0.446;AN=56;BaseQRankSum=5.394;DP=534;FS=4.661;HRun=0;HaplotypeScore=139.8723;InbreedingCoeff=0.1638;MQ=51.68;MQ0=4;MQRankSum=0.026;QD=9.06;ReadPosRankSum=-1.792;VQSLOD=2.7964;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:75.17:0,75,1053	0/0:16,0:16:14.51:0,15,81	0/0:7,0:4:8.99:0,9,112	0/0:9,0:4:5.31:0,5,91	0/1:31,0:31:18.07:18,0,323	0/1:31,0:30:28.22:124,0,28	0/1:14,0:13:28.31:39,0,28	1/1:60,5:64:99:1595,129,0	0/1:25,0:25:25.60:61,0,26	0/1:19,0:17:45.60:46,0,388	0/0:17,0:17:24.05:0,24,351	1/1:9,0:9:11.81:100,12,0	1/1:14,0:14:16.55:138,17,0	1/1:15,0:15:22.99:161,23,0	0/0:22,0:22:17.20:0,17,99	1/1:19,0:19:23.98:207,24,0	0/0:29,0:29:5.63:0,6,380	0/1:20,0:20:27.45:27,0,342	1/1:19,0:17:16.45:338,16,0	0/1:19,0:19:18.68:122,0,19	0/1:9,0:9:25.97:105,0,26	1/1:5,0:5:9.45:73,9,0	0/1:7,0:7:15.99:16,0,41	0/1:4,0:4:9.38:20,0,9	0/0:19,0:19:20.96:0,21,286	0/0:21,0:21:19.70:0,20,573	0/1:14,0:14:11.06:71,0,11	0/0:25,0:24:17:0,17,525
chr10	47436163	.	CAGGTGG	C	689.43	PASS	AB=0.927;AC=10;AF=0.179;AN=56;BaseQRankSum=5.526;DP=608;FS=33.368;HRun=0;HaplotypeScore=151.0453;InbreedingCoeff=-0.2385;MQ=60.08;MQ0=20;MQRankSum=-5.507;QD=4.45;ReadPosRankSum=-2.389;VQSLOD=0.8664;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,99,3276	0/1:9,0:9:18.74:19,0,734	0/0:77,0:29:72.43:0,72,1765	0/0:91,0:33:80.31:0,80,2292	0/0:14,0:14:27.06:0,27,703	0/1:15,3:16:39.97:40,0,528	0/0:28,5:31:52.50:0,52,1420	0/0:20,0:20:60.21:0,60,2063	0/1:17,6:22:99:196,0,1118	0/0:12,0:11:24.85:0,25,851	0/0:11,0:11:17.38:0,17,368	0/1:25,5:30:99:140,0,1584	0/1:11,5:16:99:102,0,710	0/0:18,0:18:27.27:0,27,1405	0/1:9,0:9:21.01:21,0,83	0/1:10,0:10:58.74:59,0,656	0/0:26,0:26:69.21:0,69,2032	0/0:18,1:19:51.17:0,51,1565	0/0:10,0:9:27.09:0,27,902	0/0:6,0:6:8.05:0,8,75	0/0:21,0:21:39.13:0,39,1171	0/0:9,3:12:12.04:0,12,343	0/0:8,7:15:2.31:0,2,36	0/0:28,0:28:7.28:0,7,1260	0/1:13,0:13:99:140,0,497	0/1:17,0:17:86.93:87,0,1283	0/1:10,0:10:29.80:30,0,634	0/0:4,0:4:12.04:0,12,415
chr10	47436169	.	G	GACACACACACACACAC	6823.75	PASS	AB=1.000;AC=40;AF=0.870;AN=46;BaseQRankSum=0.460;DP=688;FS=1.074;HRun=0;HaplotypeScore=257.9294;InbreedingCoeff=0.4670;MQ=55.23;MQ0=20;MQRankSum=-4.349;QD=14.52;ReadPosRankSum=-0.686;VQSLOD=3.5874;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:37:43.02:0,43,1453	1/1:10,0:10:6.01:100,6,0	0/1:73,0:24:0:0,0,0	./.	./.	1/1:17,0:15:6.02:112,6,0	1/1:35,0:33:3.48:77,3,0	0/1:26,0:26:3.65:215,0,4	1/1:22,0:21:14.33:543,14,0	1/1:15,0:14:17.65:380,18,0	./.	1/1:32,0:32:18.06:659,18,0	1/1:23,0:23:15.05:482,15,0	1/1:18,0:23:22.43:337,22,0	1/1:5,0:17:9.45:207,9,0	1/1:11,0:17:12.04:472,12,0	1/1:23,0:26:15.05:392,15,0	1/1:18,0:24:31.81:883,32,0	1/1:13,0:12:9.13:176,9,0	1/1:5,0:9:3.01:65,3,0	0/0:20,0:27:3:0,3,31	./.	./.	1/1:27,6:35:6.02:312,6,0	1/1:11,0:15:11.79:315,12,0	1/1:19,0:18:21.07:623,21,0	1/1:10,0:10:12.02:212,12,0	1/1:6,0:6:9.03:264,9,0
chr10	47436439	.	CT	C	1680.20	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.322;DP=690;FS=9.708;HRun=1;HaplotypeScore=70.8653;InbreedingCoeff=0.9968;MQ=57.28;MQ0=2;MQRankSum=2.688;QD=39.07;ReadPosRankSum=3.119;VQSLOD=4.0050;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:47:99:0,132,2049	1/1:0,12:12:36.12:503,36,0	0/0:31,0:25:69.15:0,69,1014	0/0:30,0:21:50.38:0,50,746	0/0:16,0:16:41.99:0,42,615	0/0:18,0:18:54.18:0,54,859	0/0:24,0:24:69.21:0,69,1057	0/0:24,0:24:72.24:0,72,1128	0/0:27,0:27:81.28:0,81,1287	0/0:31,0:30:87.29:0,87,1357	0/0:18,0:18:45.61:0,46,691	0/0:35,0:35:99:0,102,1577	0/0:33,0:33:99:0,99,1504	0/0:24,0:24:72.24:0,72,1137	1/1:0,31:31:93.31:1299,93,0	0/0:24,0:24:72.25:0,72,1147	0/0:29,0:29:87.27:0,87,1340	0/0:20,0:20:60.20:0,60,947	0/0:18,0:18:54.18:0,54,859	0/0:12,0:12:24.08:0,24,352	0/0:38,0:38:99:0,102,1615	0/0:20,0:20:45.15:0,45,716	0/0:16,0:16:48.16:0,48,742	0/0:34,0:34:96.33:0,96,1532	0/0:18,0:18:48.13:0,48,694	0/0:29,0:29:87.25:0,87,1248	0/0:23,0:23:57.15:0,57,881	0/0:7,0:7:21.07:0,21,336
chr10	47437714	.	C	CTT	1027.22	PASS	AB=0.577;AC=19;AF=0.339;AN=56;BaseQRankSum=10.513;DP=467;FS=2.297;HRun=13;HaplotypeScore=76.4668;InbreedingCoeff=0.7998;MQ=59.11;MQ0=11;MQRankSum=0.580;QD=6.94;ReadPosRankSum=-0.899;VQSLOD=0.5189;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:56.30:0,56,470	0/0:7,0:7:14.92:0,15,124	1/1:7,0:5:2.37:8,2,0	0/0:8,0:6:5.85:0,6,53	0/0:20,0:22:21.78:0,22,297	1/1:3,12:21:37.92:427,38,0	1/1:9,9:19:26.93:278,27,0	0/0:27,0:21:29.70:0,30,264	1/1:3,0:14:14.97:52,15,0	0/0:14,0:13:23.89:0,24,211	0/0:18,0:19:18.74:0,19,284	0/1:4,0:15:34.44:51,0,34	1/1:10,0:21:34.36:168,34,0	0/0:19,0:19:32.75:0,33,281	0/0:6,0:6:11.98:0,12,106	1/1:4,1:16:2.04:92,2,0	0/0:24,0:25:47.78:0,48,465	0/0:20,0:20:38.92:0,39,339	0/0:18,0:18:17.75:0,18,153	0/0:19,0:19:17.45:0,17,223	0/0:11,0:11:17.94:0,18,159	1/1:2,0:6:7.95:37,8,0	1/1:5,1:12:8.47:59,8,0	1/1:7,0:15:14.97:52,15,0	0/0:14,0:16:32.67:0,33,276	0/0:21,0:20:32.80:0,33,290	0/0:22,0:24:27.18:0,27,336	0/0:9,0:9:13.86:0,14,146
chr10	47438024	.	C	CA	17925.70	PASS	AB=0.807;AC=54;AF=0.964;AN=56;BaseQRankSum=-5.053;DP=487;FS=1.351;HRun=1;HaplotypeScore=113.4726;InbreedingCoeff=-0.0404;MQ=68.96;MQ0=1;MQRankSum=-2.020;QD=36.81;ReadPosRankSum=2.842;VQSLOD=4.7549;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,20:22:57.02:860,57,0	1/1:0,6:6:18.06:287,18,0	0/1:17,7:15:60.73:290,0,61	0/1:16,4:15:95.59:166,0,96	1/1:4,19:23:54.18:848,54,0	1/1:0,22:22:57.19:908,57,0	1/1:0,17:17:42.14:669,42,0	1/1:3,18:21:60.19:936,60,0	1/1:0,12:12:33.11:525,33,0	1/1:1,17:18:51.17:811,51,0	1/1:1,15:16:42.14:656,42,0	1/1:1,24:25:66.22:1054,66,0	1/1:0,15:16:35.92:565,36,0	1/1:3,20:23:54.18:862,54,0	1/1:0,24:24:60.20:958,60,0	1/1:1,23:24:63.21:1006,63,0	1/1:3,11:14:27.09:431,27,0	1/1:0,10:10:18.06:288,18,0	1/1:2,15:17:51.17:813,51,0	1/1:2,14:16:45.15:716,45,0	1/1:1,6:7:18.06:287,18,0	1/1:0,9:9:21.07:335,21,0	1/1:2,10:12:24.08:383,24,0	1/1:0,14:14:27.09:430,27,0	1/1:1,12:13:33.11:526,33,0	1/1:2,21:23:63.19:951,63,0	1/1:1,29:29:78.25:1221,78,0	1/1:2,5:7:9.03:144,9,0
chr10	47438041	.	G	GA	5450.46	PASS	AB=0.995;AC=50;AF=0.893;AN=56;BaseQRankSum=1.232;DP=525;FS=17.073;HRun=10;HaplotypeScore=175.4309;InbreedingCoeff=0.0185;MQ=69.68;MQ0=1;MQRankSum=-5.605;QD=10.38;ReadPosRankSum=1.511;VQSLOD=2.1642;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:17:11.06:175,11,0	1/1:6,0:6:14.91:112,15,0	0/1:37,0:18:0.71:1,0,153	0/1:36,0:22:12.60:13,0,30	1/1:14,11:25:53.67:369,54,0	1/1:5,0:23:42.75:258,43,0	1/1:9,1:17:36.30:212,36,0	1/1:25,0:25:32.06:269,32,0	1/1:6,0:15:34.11:174,34,0	1/1:9,12:22:50.09:355,50,0	1/1:8,11:19:41.45:310,41,0	1/1:11,2:23:39.77:218,40,0	1/1:7,0:17:34.32:180,34,0	0/1:18,0:17:9.73:207,0,10	1/1:22,0:22:25.68:295,26,0	1/1:10,2:19:34.51:200,35,0	1/1:4,7:12:10.77:118,11,0	1/1:1,8:9:20.56:160,21,0	1/1:25,0:25:35.41:308,35,0	0/1:10,0:10:33.51:63,0,34	0/1:8,0:8:19.46:69,0,19	1/1:7,1:13:18.76:103,19,0	1/1:6,0:12:0.33:70,0,0	1/1:6,0:12:14.20:71,14,0	1/1:7,11:18:44.62:320,45,0	1/1:10,12:22:45.16:355,45,0	0/1:30,1:30:27.05:244,0,27	1/1:1,8:9:26.89:222,27,0
chr10	47438056	.	T	TA	12353.93	PASS	AB=0.943;AC=54;AF=0.964;AN=56;BaseQRankSum=-1.392;DP=540;FS=8.500;HRun=3;HaplotypeScore=148.5797;InbreedingCoeff=0.1123;MQ=75.59;MQ0=0;MQRankSum=-4.742;QD=22.88;ReadPosRankSum=3.629;VQSLOD=3.7647;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,14:16:27.09:369,27,0	1/1:1,6:7:15.05:206,15,0	0/1:29,1:15:6.72:7,0,161	0/1:34,2:26:70.31:70,0,114	1/1:8,16:24:62.71:613,63,0	1/1:10,18:28:83.93:783,84,0	1/1:7,8:15:39.07:431,39,0	1/1:4,25:29:78.17:987,78,0	1/1:10,9:19:53.92:510,54,0	1/1:9,13:22:59.29:605,59,0	1/1:1,24:25:50.75:488,51,0	1/1:5,9:14:32.83:298,33,0	1/1:12,9:21:58.78:599,59,0	1/1:6,11:16:39.03:493,39,0	1/1:8,13:21:57.11:715,57,0	1/1:10,8:17:36.06:367,36,0	1/1:8,7:15:38.77:354,39,0	1/1:5,7:12:29.92:291,30,0	1/1:5,27:32:84.98:999,85,0	1/1:8,5:13:27.07:342,27,0	1/1:0,10:10:9.03:124,9,0	1/1:5,5:10:23.88:193,24,0	1/1:6,4:10:17.16:153,17,0	1/1:7,4:11:26.89:250,27,0	1/1:8,10:18:44.88:446,45,0	1/1:14,10:24:62.88:636,63,0	1/1:13,16:28:65.15:729,65,0	1/1:6,6:12:30.03:298,30,0
chr10	47439109	.	A	ATTACAAATATG	43981.32	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-11.929;DP=715;FS=3.870;HRun=0;HaplotypeScore=176.2406;InbreedingCoeff=0.9812;MQ=80.58;MQ0=0;MQRankSum=-19.614;QD=113.94;ReadPosRankSum=1.790;VQSLOD=5.0662;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:96.16:0,96,3265	0/0:16,0:16:48.16:0,48,1700	0/0:31,0:31:93.24:0,93,2505	0/0:20,0:20:50.23:0,50,1627	0/0:26,0:26:72.23:0,72,2386	1/1:4,12:25:45.15:2523,45,0	1/1:3,10:16:39.61:2120,40,0	1/1:17,7:40:99:5475,117,0	1/1:3,11:16:42.14:2362,42,0	0/0:37,0:37:99:0,105,3654	0/0:21,0:21:57.20:0,57,2018	1/1:5,22:33:78.27:4443,78,0	1/1:4,15:28:57.20:3256,57,0	1/1:7,13:27:57.20:3190,57,0	0/0:37,0:37:99:0,108,3698	1/1:4,13:30:48.16:2698,48,0	0/0:23,0:23:69.22:0,69,2319	0/0:11,0:11:33.09:0,33,1033	1/1:5,5:21:63.20:2850,63,0	1/1:5,15:30:57.20:3107,57,0	1/1:3,2:9:6.02:310,6,0	1/1:5,19:39:78.22:4095,78,0	1/1:2,8:17:27.09:1489,27,0	1/1:0,6:14:12.04:696,12,0	0/0:22,0:22:66.20:0,66,2029	0/0:40,0:40:99:0,117,3962	1/1:14,19:41:99:5366,99,0	0/0:11,0:11:30.10:0,30,1088
chr10	47439369	.	ACACATGCC	A	12342.68	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=17.722;DP=774;FS=21.099;HRun=0;HaplotypeScore=207.7556;InbreedingCoeff=0.9993;MQ=77.24;MQ0=2;MQRankSum=-18.009;QD=55.85;ReadPosRankSum=0.668;VQSLOD=3.3422;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:63,0:63:99:0,166,6737	0/0:8,0:8:24.08:0,24,935	0/0:39,0:39:96.27:0,96,3379	0/0:22,0:19:51.17:0,51,1965	0/0:24,0:24:69.22:0,69,2620	1/1:1,22:23:66.23:1760,66,0	1/1:7,17:24:33.11:815,33,0	0/0:40,0:40:99:0,102,3641	1/1:2,21:23:45.15:1181,45,0	0/0:40,0:40:99:0,111,4545	0/0:23,0:23:66.22:0,66,2691	1/1:4,21:25:54.19:1416,54,0	1/1:3,22:25:60.21:1613,60,0	0/0:22,0:22:63.21:0,63,2439	0/0:40,0:40:99:0,117,4461	1/1:4,29:33:78.27:2092,78,0	0/0:35,0:35:99:0,102,4191	0/0:30,0:30:72.25:0,72,2912	0/0:25,0:25:60.21:0,60,2422	0/0:19,0:19:54.19:0,54,2275	0/0:36,0:36:96.30:0,96,3861	1/1:3,19:22:48.03:1225,48,0	1/1:3,21:24:51.18:1356,51,0	1/1:4,18:22:33.11:884,33,0	0/0:21,0:21:51.17:0,51,1930	0/0:27,0:27:72.24:0,72,2748	0/0:30,0:30:90.31:0,90,3788	0/0:8,0:8:24.08:0,24,992
chr10	47440215	.	CGAGAACGT	C	19181.79	PASS	AC=30;AF=0.556;AN=54;BaseQRankSum=15.927;DP=516;FS=0.335;HRun=0;HaplotypeScore=222.1622;InbreedingCoeff=0.9984;MQ=77.00;MQ0=0;MQRankSum=-16.887;QD=70.52;ReadPosRankSum=2.575;VQSLOD=4.9022;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:69.24:0,69,2853	0/0:9,0:9:24.08:0,24,1008	0/0:25,0:25:42.13:0,42,2410	0/0:17,0:15:37.68:0,38,1329	0/0:27,0:27:72.23:0,72,2749	1/1:1,15:16:48.15:1305,48,0	1/1:5,9:14:33.11:871,33,0	1/1:4,23:28:75.26:2058,75,0	1/1:1,21:22:63.22:1755,63,0	0/0:31,0:31:90.31:0,90,3457	0/0:22,0:22:51.18:0,51,2147	1/1:4,17:21:51.18:1444,51,0	1/1:6,16:22:51.18:1405,51,0	1/1:2,17:20:54.19:1488,54,0	0/0:14,0:14:42.14:0,42,1764	1/1:1,19:20:57.20:1625,57,0	0/0:24,0:24:69.24:0,69,2824	0/0:15,0:15:45.12:0,45,1865	1/1:3,13:16:45.15:1273,45,0	1/1:7,14:21:51.14:1276,51,0	1/1:2,9:11:21.05:518,21,0	1/1:2,10:12:33.10:884,33,0	1/1:2,14:16:42.14:1196,42,0	1/1:1,13:14:21.07:599,21,0	0/0:11,0:11:30.10:0,30,1340	0/0:25,0:25:75.26:0,75,3046	1/1:2,17:19:54.17:1485,54,0	./.
chr10	47440238	.	GGTTTTTTTTT	G	15951.53	PASS	AB=0.727;AC=29;AF=0.518;AN=56;BaseQRankSum=16.983;DP=551;FS=2.374;HRun=0;HaplotypeScore=276.8246;InbreedingCoeff=0.9114;MQ=58.72;MQ0=1;MQRankSum=-14.637;QD=52.82;ReadPosRankSum=9.729;VQSLOD=3.2588;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:78.24:0,78,3409	0/0:9,0:9:24.07:0,24,1043	0/0:21,0:11:27:0,27,473	0/0:15,0:10:7.61:0,8,511	0/0:29,0:27:68.97:0,69,1816	1/1:1,16:17:48.11:1448,48,0	1/1:1,15:16:41.86:1174,42,0	1/1:13,0:34:38.28:1026,38,0	1/1:6,19:25:65.97:1636,66,0	0/0:30,0:30:87.24:0,87,3266	0/0:19,0:19:51.14:0,51,1924	1/1:4,15:19:50.04:1304,50,0	1/1:5,15:20:56.93:1429,57,0	1/1:5,0:25:63.95:1079,64,0	0/0:7,0:7:18.01:0,18,470	1/1:7,15:22:62.86:1478,63,0	0/0:30,0:30:76.30:0,76,2656	0/0:12,0:12:32.96:0,33,1061	1/1:11,0:20:44.65:631,45,0	1/1:4,0:22:21.64:857,22,0	0/1:10,0:16:4.09:172,0,4	1/1:1,10:11:29.98:869,30,0	1/1:1,17:20:47.99:1377,48,0	1/1:8,3:11:23.54:309,24,0	0/0:16,0:16:45.10:0,45,1483	0/0:29,0:28:81.14:0,81,2690	1/1:4,0:24:70.31:1162,70,0	0/0:3,0:3:3.01:0,3,115
chr10	47440540	.	C	CGTGTGT	2867.47	PASS	AB=0.877;AC=43;AF=0.860;AN=50;BaseQRankSum=2.179;DP=602;FS=16.805;HRun=0;HaplotypeScore=171.1603;InbreedingCoeff=0.3231;MQ=55.94;MQ0=8;MQRankSum=-2.472;QD=5.97;ReadPosRankSum=-2.929;VQSLOD=1.2267;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:47,0:50:55:55,0,503	0/0:18,0:20:21.06:0,21,339	./.	./.	1/1:26,0:24:5.44:89,5,0	1/1:18,0:18:6.01:73,6,0	1/1:27,0:26:5.95:72,6,0	1/1:27,0:27:23.83:198,24,0	1/1:19,0:17:2.88:24,3,0	1/1:20,0:20:24.87:324,25,0	1/1:13,0:18:8.86:131,9,0	1/1:19,0:19:2.96:59,3,0	1/1:20,0:18:15.01:268,15,0	1/1:13,0:13:5.96:49,6,0	0/0:31,0:33:33.25:0,33,488	1/1:20,0:20:5.99:50,6,0	0/1:15,17:36:48.92:219,0,49	1/1:10,1:19:12.04:260,12,0	1/1:10,0:10:8.52:101,9,0	0/1:12,0:11:0:0,0,0	1/1:22,0:22:3.01:55,3,0	1/1:18,0:18:5.99:50,6,0	./.	1/1:16,0:16:2.97:67,3,0	1/1:16,0:16:9.25:76,9,0	1/1:25,0:25:27.02:330,27,0	1/1:23,0:22:18.01:288,18,0	1/1:5,0:5:12:163,12,0
chr10	47440561	.	G	GTA	1399.92	PASS	AB=0.952;AC=18;AF=0.321;AN=56;BaseQRankSum=-0.207;DP=613;FS=9.130;HRun=0;HaplotypeScore=115.2672;InbreedingCoeff=-0.1276;MQ=48.31;MQ0=12;MQRankSum=2.066;QD=4.70;ReadPosRankSum=-0.579;VQSLOD=2.0874;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,107,1073	0/0:16,0:16:29.99:0,30,345	0/0:33,0:8:22.84:0,23,231	0/0:30,0:13:32.92:0,33,345	0/0:26,0:24:3.95:0,4,133	1/1:16,0:16:14.99:146,15,0	0/1:17,17:33:23.55:24,0,182	0/1:26,0:26:99:301,0,124	0/1:21,0:19:46.46:114,0,46	0/0:23,0:23:33.76:0,34,340	0/0:19,0:19:11.23:0,11,113	0/1:21,0:21:36.93:143,0,37	0/1:19,0:17:36.22:36,0,80	0/1:17,0:17:18.74:112,0,19	0/0:34,0:34:60.84:0,61,862	0/1:19,0:19:51.89:103,0,52	0/0:32,0:32:11.42:0,11,181	0/0:20,0:20:19.95:0,20,189	0/1:10,0:10:19.82:20,0,70	1/1:15,0:14:5.96:50,6,0	0/1:10,10:20:35.99:36,0,100	0/1:21,0:21:6.03:169,0,6	0/1:14,0:14:4.01:101,0,4	0/1:15,0:15:13.89:14,0,41	0/0:13,0:13:17.26:0,17,128	0/0:22,0:21:56.46:0,56,435	0/1:23,0:22:37.81:190,0,38	0/1:7,0:7:6.81:7,0,59
chr10	47440744	.	T	TG	3054.86	PASS	AB=0.979;AC=26;AF=0.464;AN=56;BaseQRankSum=13.700;DP=587;FS=10.786;HRun=6;HaplotypeScore=80.5328;InbreedingCoeff=0.7095;MQ=82.28;MQ0=0;MQRankSum=-2.940;QD=9.73;ReadPosRankSum=2.406;VQSLOD=0.6436;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:87.17:0,87,874	0/0:8,0:8:21.04:0,21,213	0/0:25,0:24:50.28:0,50,535	0/0:32,0:32:67.99:0,68,660	0/0:13,0:13:36.08:0,36,366	1/1:12,0:12:28.51:146,29,0	1/1:26,0:26:6.74:196,7,0	1/1:33,1:34:70.56:327,71,0	0/1:10,0:10:6.04:66,0,6	0/0:16,0:16:39.03:0,39,379	0/0:8,0:8:24.05:0,24,239	1/1:22,0:22:23.76:202,24,0	1/1:28,0:28:16.46:254,16,0	1/1:18,0:18:22.49:217,22,0	0/0:31,0:31:72.09:0,72,715	1/1:4,12:16:44.31:507,44,0	0/0:46,0:46:99:0,111,1125	0/0:12,0:12:27.03:0,27,267	0/1:14,0:14:42.83:85,0,43	0/1:13,0:13:7.08:153,0,7	1/1:35,0:35:9.08:254,9,0	1/1:18,0:18:11.13:161,11,0	0/1:10,1:11:19.55:103,0,20	1/1:37,0:37:60.52:396,61,0	0/0:19,0:19:48.11:0,48,489	0/0:24,0:24:60.10:0,60,594	1/1:20,0:20:20.56:203,21,0	0/0:8,0:8:21.04:0,21,214
chr10	47440750	.	G	GA	8610.73	PASS	AB=1.000;AC=31;AF=0.554;AN=56;BaseQRankSum=-10.149;DP=560;FS=1.216;HRun=5;HaplotypeScore=56.9252;InbreedingCoeff=0.9527;MQ=82.86;MQ0=0;MQRankSum=-3.902;QD=25.63;ReadPosRankSum=-0.424;VQSLOD=3.9376;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:81.18:0,81,858	0/0:8,0:8:20.72:0,21,204	0/0:24,0:23:51.11:0,51,540	0/0:31,0:31:84.03:0,84,829	0/0:12,0:12:36.07:0,36,377	1/1:0,14:14:30.10:389,30,0	1/1:2,21:26:54.63:675,55,0	1/1:3,28:31:87.25:1084,87,0	1/1:1,5:7:18.06:226,18,0	0/0:14,0:14:33.07:0,33,344	0/0:9,0:9:21.01:0,21,224	1/1:1,18:19:42.14:545,42,0	1/1:2,22:27:66.09:794,66,0	1/1:1,15:17:45.10:564,45,0	0/1:29,0:29:1.55:2,0,614	1/1:17,1:18:19.14:231,19,0	0/0:42,0:42:85.62:0,86,1130	0/0:10,0:10:23.12:0,23,246	1/1:4,9:14:30.04:340,30,0	1/1:1,12:13:30.10:386,30,0	1/1:3,31:34:69.22:896,69,0	1/1:5,15:20:42:500,42,0	1/1:3,8:11:21:265,21,0	1/1:1,33:35:87.28:1130,87,0	0/0:17,0:17:51.12:0,51,539	0/0:21,0:21:51.20:0,51,569	1/1:1,20:21:45.15:584,45,0	0/0:7,0:7:21.05:0,21,225
chr10	47441811	.	GA	G	4196.62	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=6.598;DP=579;FS=5.568;HRun=10;HaplotypeScore=112.2563;InbreedingCoeff=0.9312;MQ=61.72;MQ0=10;MQRankSum=1.322;QD=19.43;ReadPosRankSum=3.495;VQSLOD=3.4899;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:40,1:42:88.07:0,88,1174	1/1:0,3:3:9:78,9,0	0/0:14,0:6:15.03:0,15,155	0/0:18,0:12:8.98:0,9,246	0/0:16,1:17:12.71:0,13,345	1/1:1,16:17:41.99:365,42,0	1/1:4,28:32:62.98:546,63,0	0/0:24,0:24:60.16:0,60,663	1/1:2,9:11:17.99:156,18,0	0/0:21,0:22:38.15:0,38,452	0/0:16,1:18:24.91:0,25,479	1/1:5,19:24:53.98:469,54,0	1/1:1,16:19:49.05:403,49,0	0/0:23,0:23:60.15:0,60,656	1/1:4,16:20:44.99:391,45,0	1/1:3,21:24:56.97:494,57,0	0/0:28,0:28:76.59:0,77,794	0/0:23,0:23:57.12:0,57,618	0/0:20,0:19:48.11:0,48,521	0/0:12,1:14:9.85:0,10,300	0/0:23,0:23:33.24:0,33,571	1/1:4,12:16:0.23:228,0,0	1/1:4,28:32:77.61:677,78,0	1/1:2,16:18:44.88:391,45,0	0/0:17,0:18:38.94:0,39,411	0/0:19,0:18:51.13:0,51,556	0/0:29,1:30:37.11:0,37,636	0/0:8,0:8:20.73:0,21,210
chr10	47442508	.	TGTTAGAGCCTAGGTAAAATATTAAGGCCCAGATGGAAG	T	4601.74	PASS	AB=0.786;AC=34;AF=0.654;AN=52;BaseQRankSum=7.069;DP=416;FS=65.309;HRun=0;HaplotypeScore=320.1886;InbreedingCoeff=0.6557;MQ=87.04;MQ0=0;MQRankSum=-3.797;QD=20.01;ReadPosRankSum=3.252;VQSLOD=1.0940;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:51.17:0,51,2745	./.	0/1:28,0:28:49.20:49,0,1468	0/0:20,0:20:35.54:0,36,1535	1/1:5,12:17:2.92:17,3,0	1/1:12,0:12:3.01:148,3,0	1/1:10,0:10:3.01:129,3,0	0/0:16,0:16:42.12:0,42,1460	1/1:11,0:10:6.02:298,6,0	1/1:8,7:14:15.05:491,15,0	1/1:5,9:14:5.93:54,6,0	1/1:19,0:19:18.06:886,18,0	1/1:11,0:11:9.03:440,9,0	0/0:16,0:16:39.13:0,39,1318	1/1:11,0:11:15.03:220,15,0	1/1:11,0:11:9.03:445,9,0	1/1:5,0:5:6.02:297,6,0	1/1:7,0:7:3.01:131,3,0	0/0:20,0:20:36.05:0,36,1168	0/0:20,0:20:57.14:0,57,2145	0/0:32,0:32:84.29:0,84,3937	./.	0/1:3,9:12:0:0,0,0	1/1:10,0:10:11.89:118,12,0	1/1:15,0:15:3.01:147,3,0	1/1:16,0:16:21.04:706,21,0	0/0:22,0:22:54.12:0,54,1942	1/1:6,0:6:2.99:23,3,0
chr10	47442527	.	TATTAAGGCCCAGATGGAAG	T	3877.99	PASS	AB=1.000;AC=34;AF=0.654;AN=52;BaseQRankSum=7.886;DP=342;FS=61.863;HRun=0;HaplotypeScore=152.6347;InbreedingCoeff=0.6556;MQ=76.72;MQ0=0;MQRankSum=-3.925;QD=28.10;ReadPosRankSum=3.075;VQSLOD=0.7386;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:60.21:0,60,3716	./.	0/1:20,0:20:28.11:28,0,2231	0/0:22,0:21:62.17:0,62,3410	1/1:12,0:12:2.92:17,3,0	1/1:0,6:6:3.01:130,3,0	1/1:0,5:5:3.01:126,3,0	0/0:26,0:26:78.25:0,78,3599	1/1:0,8:8:6.02:259,6,0	1/1:7,0:6:15.03:383,15,0	1/1:9,0:9:5.93:54,6,0	1/1:0,11:11:18.06:772,18,0	1/1:0,6:6:9.03:384,9,0	0/0:21,0:21:57.20:0,57,2173	1/1:6,0:6:14.93:136,15,0	1/1:0,6:6:9.03:388,9,0	1/1:0,4:4:6.02:257,6,0	1/1:0,5:5:3.01:111,3,0	0/0:17,0:17:48.10:0,48,1959	0/0:20,0:20:60.15:0,60,2663	0/0:38,0:38:99:0,114,6056	./.	0/1:9,0:9:0:0,0,0	1/1:6,0:6:11.77:80,12,0	1/1:0,10:10:3.01:129,3,0	1/1:0,7:7:20.99:603,21,0	0/0:25,0:25:72.18:0,72,2883	1/1:1,0:1:2.99:23,3,0
chr10	47444058	.	TACTGACATCCTACTTGTCAGAAAGAAGCATGTGCATGGGTG	T	6257.90	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=10.074;DP=673;FS=10.286;HRun=0;HaplotypeScore=629.6787;InbreedingCoeff=0.9478;MQ=74.86;MQ0=0;MQRankSum=-6.792;QD=49.27;ReadPosRankSum=0.568;VQSLOD=-0.1733;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:81.22:0,81,12025	0/0:13,0:13:33.11:0,33,4185	0/0:30,0:30:66.09:0,66,3190	0/0:30,0:30:65.34:0,65,3472	1/1:4,14:18:14.97:967,15,0	0/0:27,0:27:78.18:0,78,9845	0/0:20,0:20:54.17:0,54,5975	0/0:31,0:31:69.20:0,69,4465	0/0:27,0:27:63.20:0,63,8946	1/1:5,16:21:29.91:644,30,0	1/1:2,21:23:17.89:1270,18,0	0/0:32,0:32:84.29:0,84,12169	0/0:24,0:24:63.20:0,63,9594	0/0:29,0:29:69.20:0,69,9653	0/0:36,0:36:87.28:0,87,11214	0/0:25,0:25:57.16:0,57,8386	1/1:3,14:17:6.02:340,6,0	1/1:14,0:14:33.09:455,33,0	0/0:16,0:16:36.12:0,36,4024	0/0:33,0:33:87.30:0,87,12809	0/0:28,0:28:75.24:0,75,9758	0/0:29,0:29:81.26:0,81,10621	0/0:28,0:28:78.17:0,78,9776	0/0:24,0:24:66.17:0,66,8045	1/1:13,0:13:30.07:428,30,0	1/1:1,15:16:36.05:1844,36,0	0/0:34,0:34:87.28:0,87,12801	1/1:0,5:5:3.01:310,3,0
chr10	47444098	.	TG	T	103.63	PASS	AC=12;AF=0.231;AN=52;BaseQRankSum=7.205;DP=635;FS=0.898;HRun=3;HaplotypeScore=101.8466;InbreedingCoeff=0.8478;MQ=68.52;MQ0=0;MQRankSum=-4.524;QD=1.36;ReadPosRankSum=2.006;VQSLOD=-0.5233;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,117,1860	0/0:7,0:7:21.07:0,21,336	0/0:17,0:17:51.17:0,51,798	0/0:10,0:10:30.10:0,30,475	1/1:14,0:14:7.55:28,8,0	0/0:25,0:25:75.24:0,75,1166	0/0:22,0:22:66.23:0,66,1053	0/0:46,0:46:99:0,138,2177	0/0:23,0:23:69.24:0,69,1103	1/1:16,0:16:2.37:8,2,0	1/1:21,0:21:9.61:32,10,0	0/0:28,0:28:84.29:0,84,1343	0/0:27,0:27:78.27:0,78,1242	0/0:29,0:29:87.28:0,87,1364	0/0:36,0:36:99:0,108,1724	0/0:28,0:28:84.29:0,84,1340	./.	./.	0/0:21,0:21:63.21:0,63,985	0/0:33,0:33:99:0,99,1577	0/0:33,0:33:99:0,99,1535	0/0:27,0:27:81.28:0,81,1288	0/0:27,0:27:81.26:0,81,1266	0/0:27,0:27:81.28:0,81,1291	1/1:0,5:5:3.01:41,3,0	1/1:15,0:15:20.72:134,21,0	0/0:40,0:40:99:0,120,1909	1/1:5,0:5:2.37:8,2,0
chr10	47445155	.	AT	A	6484.21	PASS	AB=1.000;AC=33;AF=0.589;AN=56;BaseQRankSum=11.088;DP=545;FS=5.094;HRun=10;HaplotypeScore=50.9185;InbreedingCoeff=0.9372;MQ=69.04;MQ0=2;MQRankSum=-0.235;QD=17.81;ReadPosRankSum=-0.070;VQSLOD=5.1819;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:90.20:0,90,976	0/0:9,0:9:21.06:0,21,232	0/0:11,0:9:11.15:0,11,122	0/1:11,0:9:4.69:5,0,108	1/1:5,24:29:68.97:597,69,0	1/1:1,18:19:41.99:365,42,0	1/1:1,13:14:26.99:234,27,0	1/1:2,22:23:56.90:478,57,0	0/0:11,0:11:24.06:0,24,265	1/1:7,19:26:56.91:487,57,0	1/1:8,22:30:59.97:521,60,0	0/0:18,0:18:48.12:0,48,523	0/0:10,0:10:27.07:0,27,299	1/1:4,19:23:35.98:313,36,0	0/0:19,0:19:57.15:0,57,631	0/0:18,0:18:51.11:0,51,546	1/1:0,22:23:56.03:475,56,0	1/1:1,13:14:32.98:286,33,0	1/1:5,16:21:44.99:391,45,0	1/1:7,24:31:37.77:533,38,0	1/1:1,8:8:20.99:182,21,0	0/0:17,0:17:39.11:0,39,431	0/0:19,0:19:54.14:0,54,594	0/0:15,0:15:42.11:0,42,465	1/1:3,22:25:44.99:391,45,0	1/1:5,21:26:20.05:495,20,0	1/1:4,21:25:49.53:421,50,0	1/1:0,13:13:35.99:312,36,0
chr10	47447135	.	GT	G	737.02	PASS	AB=0.929;AC=15;AF=0.278;AN=54;BaseQRankSum=0.010;DP=294;FS=27.735;HRun=10;HaplotypeScore=36.4375;InbreedingCoeff=0.4633;MQ=66.17;MQ0=35;MQRankSum=-5.519;QD=6.64;ReadPosRankSum=-0.867;VQSLOD=-0.2660;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:22:43.29:0,43,471	0/0:6,0:6:11.72:0,12,70	0/1:21,0:13:32.85:33,0,158	0/0:19,0:9:17.68:0,18,155	1/1:14,0:13:5.93:47,6,0	0/0:14,0:14:30.05:0,30,315	0/0:7,0:5:15.04:0,15,166	1/1:14,0:13:35.44:229,35,0	0/0:4,0:3:8.87:0,9,58	0/1:7,0:5:18.28:65,0,18	0/0:10,0:10:0:0,0,0	0/0:5,0:4:5.91:0,6,38	0/0:7,0:6:8.96:0,9,81	0/0:8,0:6:12:0,12,120	0/1:5,0:5:7.92:8,0,45	0/1:8,0:6:2.04:77,0,2	1/1:10,0:10:14.50:96,14,0	0/1:5,6:9:34.59:35,0,51	0/0:15,1:14:12.94:0,13,328	0/0:11,0:10:20.98:0,21,210	0/0:9,0:9:11.95:0,12,116	0/0:5,0:4:5.98:0,6,53	0/0:11,0:11:20.79:0,21,162	0/0:5,0:2:3.01:0,3,32	1/1:11,0:11:20.64:136,21,0	1/1:10,0:10:29.45:184,29,0	0/0:19,0:18:47.91:0,48,490	./.
chr10	47449807	.	TCA	T	527.94	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=0.816;DP=499;FS=0.000;HRun=0;HaplotypeScore=95.2470;InbreedingCoeff=0.9436;MQ=74.63;MQ0=2;MQRankSum=-1.239;QD=33.00;ReadPosRankSum=-0.747;VQSLOD=5.5306;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,102,1853	0/0:5,0:5:15.05:0,15,281	0/0:20,0:16:33.11:0,33,613	0/0:25,0:21:38.23:0,38,674	0/0:30,0:30:84.15:0,84,1385	0/0:24,0:24:69.21:0,69,1248	0/0:11,0:11:21.05:0,21,356	0/0:35,0:35:96.30:0,96,1705	0/0:10,0:10:24.08:0,24,448	0/0:17,0:17:51.13:0,51,891	0/0:20,0:20:60.19:0,60,1073	0/0:19,0:19:51.17:0,51,955	0/0:13,0:13:30.10:0,30,562	0/0:15,0:15:36.12:0,36,674	0/0:23,0:23:60.18:0,60,1061	1/1:4,12:16:45.12:623,45,0	0/0:19,0:19:57.15:0,57,994	0/0:17,0:17:45.15:0,45,842	0/0:16,0:16:48.15:0,48,857	0/0:23,0:23:63.18:0,63,1107	0/0:10,0:10:24.07:0,24,417	0/0:12,0:12:36.11:0,36,642	0/0:4,0:4:12.04:0,12,224	0/0:11,0:11:24.08:0,24,449	0/0:18,0:18:54.19:0,54,1010	0/0:16,0:16:42.11:0,42,694	0/0:24,0:24:57.14:0,57,1008	0/0:8,0:8:24.08:0,24,449
chr10	47449825	.	GT	G	3875.29	PASS	AB=0.938;AC=46;AF=0.821;AN=56;BaseQRankSum=-6.705;DP=525;FS=12.983;HRun=11;HaplotypeScore=96.8730;InbreedingCoeff=0.4875;MQ=69.69;MQ0=4;MQRankSum=-2.022;QD=9.12;ReadPosRankSum=1.687;VQSLOD=1.2795;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:52.72:0,53,647	1/1:1,5:6:8.83:74,9,0	0/0:40,0:15:10.98:0,11,82	0/0:31,0:16:30.40:0,30,186	0/1:26,2:28:23.28:44,0,23	1/1:4,16:20:53.97:411,54,0	1/1:2,12:14:16.29:141,16,0	1/1:7,12:29:52.74:288,53,0	1/1:0,14:14:27.44:222,27,0	1/1:25,0:26:12.15:44,12,0	1/1:19,3:22:12.21:98,12,0	1/1:5,12:17:23.96:197,24,0	1/1:2,9:11:14.94:117,15,0	1/1:4,13:18:23.44:174,23,0	1/1:6,8:14:20.79:155,21,0	1/1:15,0:15:22.11:73,22,0	0/1:25,0:27:16.15:62,0,16	1/1:13,1:14:2.35:43,2,0	1/1:3,12:16:23.26:235,23,0	1/1:1,19:20:53.43:404,53,0	1/1:1,13:14:29.93:243,30,0	1/1:2,8:10:20.86:159,21,0	1/1:0,7:7:11.98:98,12,0	1/1:1,10:11:17.43:167,17,0	0/1:20,1:21:2.34:42,0,2	1/1:18,0:18:9.35:67,9,0	1/1:3,16:19:35.86:286,36,0	0/1:13,1:14:3.49:30,0,3
chr10	47449834	.	TTTA	T	1325.17	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=0.698;DP=544;FS=3.943;HRun=0;HaplotypeScore=126.3269;InbreedingCoeff=0.0024;MQ=69.75;MQ0=4;MQRankSum=0.131;QD=3.80;ReadPosRankSum=2.616;VQSLOD=2.4707;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:80.03:0,80,1513	0/0:5,0:5:12.02:0,12,117	0/0:44,0:14:7.70:0,8,197	0/0:33,0:15:32.88:0,33,370	0/1:29,0:29:21.40:21,0,164	1/1:20,0:20:28.02:163,28,0	0/1:14,0:14:7.48:12,0,7	0/1:30,0:30:43.78:159,0,44	0/0:16,0:16:32.71:0,33,320	0/1:29,0:29:52.56:162,0,53	0/1:21,0:23:74.76:92,0,75	0/0:13,0:13:27.05:0,27,271	0/0:13,0:13:23.91:0,24,207	0/1:19,0:19:15.74:16,0,31	0/0:12,0:12:10.01:0,10,190	1/1:1,12:13:29.90:445,30,0	0/1:27,0:28:56.14:56,0,126	0/1:16,0:16:54.91:72,0,55	0/1:22,0:22:24.21:24,0,183	1/1:20,0:20:5.33:83,5,0	1/1:13,0:13:19.92:56,20,0	0/0:10,0:10:22.82:0,23,209	0/0:10,0:10:21.02:0,21,197	0/0:12,0:12:27.05:0,27,282	0/1:16,0:18:21.67:22,0,44	0/1:20,0:23:50.58:51,0,75	0/1:18,0:18:7.46:28,0,7	0/1:11,0:14:31.31:44,0,31
chr10	47450377	.	C	CT	6655.41	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-11.899;DP=711;FS=0.000;HRun=1;HaplotypeScore=69.9873;InbreedingCoeff=0.9944;MQ=81.22;MQ0=0;MQRankSum=-0.345;QD=39.62;ReadPosRankSum=0.400;VQSLOD=5.2975;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:64,0:64:99:0,190,2389	0/0:5,0:5:12.04:0,12,156	0/0:20,0:20:57.16:0,57,718	0/0:19,0:19:44.89:0,45,555	0/0:25,0:25:69.21:0,69,880	1/1:0,29:29:72.24:1079,72,0	1/1:1,22:23:60.20:899,60,0	0/0:33,0:33:96.30:0,96,1234	0/0:19,0:19:54.16:0,54,686	0/0:32,0:33:95.90:0,96,1213	0/0:26,0:26:78.24:0,78,998	0/0:33,0:33:87.24:0,87,1097	0/0:33,0:33:96.31:0,96,1247	1/1:1,36:37:99:1467,99,0	0/0:33,0:33:96.31:0,96,1247	0/0:22,0:22:66.21:0,66,856	0/0:21,0:21:63.20:0,63,816	0/0:22,0:22:66.21:0,66,845	1/1:1,20:21:63.21:942,63,0	1/1:1,16:17:45.11:649,45,0	1/1:0,18:18:48.16:720,48,0	0/0:18,0:18:51.17:0,51,662	0/0:27,0:27:78.25:0,78,1012	0/0:31,0:31:90.29:0,90,1167	0/0:17,0:17:51.17:0,51,662	0/0:28,0:28:81.26:0,81,1050	1/1:0,23:23:60.20:899,60,0	0/0:14,0:14:39.13:0,39,502
chr10	47451915	.	CCATA	C	1307.81	PASS	AB=0.950;AC=5;AF=0.089;AN=56;BaseQRankSum=7.603;DP=530;FS=12.489;HRun=0;HaplotypeScore=79.2862;InbreedingCoeff=0.7560;MQ=62.68;MQ0=15;MQRankSum=1.026;QD=25.15;ReadPosRankSum=2.728;VQSLOD=2.4701;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:66.23:0,66,1791	1/1:0,7:7:14.98:251,15,0	0/0:19,0:5:15.01:0,15,349	0/1:18,0:11:21.81:22,0,343	0/0:17,0:17:51.16:0,51,1338	0/0:23,0:23:63.22:0,63,1725	0/0:24,0:24:69.24:0,69,1864	0/0:30,0:26:75.24:0,75,1969	0/0:21,0:21:63.22:0,63,1702	0/0:18,0:18:51.18:0,51,1398	0/0:10,0:10:30.10:0,30,778	0/0:21,0:21:63.22:0,63,1681	0/0:22,0:22:63.20:0,63,1633	0/0:19,0:19:54.17:0,54,1376	1/1:1,25:26:60.21:1162,60,0	0/0:21,0:21:60.21:0,60,1632	0/0:19,0:19:57.20:0,57,1561	0/0:25,0:24:66.23:0,66,1807	0/0:19,0:16:48.16:0,48,1262	0/0:15,0:15:42.13:0,42,1092	0/0:27,0:27:78.27:0,78,2108	0/0:12,0:12:36.12:0,36,934	0/0:11,0:11:33.10:0,33,845	0/0:26,0:26:78.27:0,78,2121	0/0:7,0:7:21.07:0,21,543	0/0:24,0:24:66.23:0,66,1673	0/0:21,0:21:60.21:0,60,1608	0/0:4,0:4:12.04:0,12,329
chr10	47452447	.	A	AAACAAAAAC	8246.77	PASS	AB=0.756;AC=48;AF=0.857;AN=56;BaseQRankSum=4.331;DP=640;FS=24.519;HRun=0;HaplotypeScore=188.2632;InbreedingCoeff=0.4161;MQ=61.01;MQ0=14;MQRankSum=-5.023;QD=13.91;ReadPosRankSum=2.705;VQSLOD=2.5315;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:63.22:0,63,1696	0/1:0,0:9:36.24:80,0,36	0/0:24,0:16:33.35:0,33,681	0/1:22,0:16:9.88:10,0,564	1/1:1,0:24:38.88:301,39,0	1/1:2,16:28:30.10:1435,30,0	1/1:0,14:20:12.04:569,12,0	0/1:25,0:21:99:318,0,184	1/1:1,0:25:27.50:311,28,0	1/1:2,0:25:41.60:417,42,0	1/1:0,0:18:24.19:157,24,0	1/1:1,0:22:31.59:123,32,0	1/1:1,0:20:26.01:156,26,0	1/1:1,0:24:31.98:281,32,0	0/1:2,0:23:99:212,0,117	1/1:2,16:29:14.84:583,15,0	1/1:4,0:23:38.88:307,39,0	1/1:2,0:26:24.81:125,25,0	1/1:7,0:20:31.29:314,31,0	1/1:0,0:22:41.85:414,42,0	1/1:0,0:15:19.60:154,20,0	1/1:6,0:29:38.42:538,38,0	1/1:2,0:33:45.54:610,46,0	1/1:3,0:29:31.19:180,31,0	1/1:3,0:19:25.60:218,26,0	1/1:1,0:16:35.09:318,35,0	1/1:1,0:28:23.43:91,23,0	1/1:0,0:7:9.08:26,9,0
chr10	47452762	.	AGGAAGTTGTGAG	A	11369.85	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=7.403;DP=486;FS=11.114;HRun=0;HaplotypeScore=322.3332;InbreedingCoeff=0.5752;MQ=61.15;MQ0=0;MQRankSum=-4.085;QD=50.99;ReadPosRankSum=6.016;VQSLOD=3.3107;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:36:71.40:0,71,2505	0/0:6,0:6:18.06:0,18,719	0/0:12,0:12:33.11:0,33,1012	0/0:9,0:9:27.04:0,27,873	0/0:16,0:16:42.13:0,42,1179	0/1:18,0:18:51.82:810,0,52	1/1:24,0:24:8.22:1456,8,0	0/0:38,0:38:99:0,100,3172	1/1:14,0:14:18.12:1030,18,0	0/0:19,0:19:48.16:0,48,1684	0/0:11,0:11:30.10:0,30,780	1/1:12,0:12:6.10:725,6,0	0/1:26,0:26:68.75:1213,0,69	1/1:5,11:16:30.08:1037,30,0	0/0:25,0:24:72.25:0,72,2898	0/0:23,0:23:66.23:0,66,2592	0/0:29,0:29:84.29:0,84,3144	0/0:7,0:7:21.07:0,21,742	1/1:15,7:22:30.07:870,30,0	1/1:7,9:16:30.09:1032,30,0	1/1:6,3:9:9.03:326,9,0	0/1:16,0:16:38.99:546,0,39	0/1:17,0:17:73.82:685,0,74	0/1:14,0:14:20.89:513,0,21	0/0:13,0:13:36.12:0,36,1135	0/0:14,0:14:42.14:0,42,1391	1/1:6,13:19:30.10:1128,30,0	0/0:4,0:4:12.04:0,12,450
chr10	47452766	.	AGTTGTGAGGGAT	A	12324.29	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=4.668;DP=444;FS=5.082;HRun=0;HaplotypeScore=301.5966;InbreedingCoeff=0.9821;MQ=62.00;MQ0=0;MQRankSum=-5.789;QD=70.42;ReadPosRankSum=6.846;VQSLOD=3.7228;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:33:78.51:0,79,2172	0/0:6,0:6:18.06:0,18,701	0/0:12,0:12:30.10:0,30,869	0/0:9,0:9:21.07:0,21,713	0/0:17,0:17:39.13:0,39,1010	1/1:4,10:14:27.09:1026,27,0	1/1:4,17:21:48.16:1806,48,0	0/0:44,0:44:99:0,112,3267	1/1:2,12:14:36.12:1291,36,0	0/0:17,0:17:48.16:0,48,1602	0/0:10,0:10:30.10:0,30,714	1/1:1,10:11:24.08:895,24,0	1/1:6,20:26:39.13:1500,39,0	1/1:12,0:12:27.08:854,27,0	0/0:26,0:25:75.26:0,75,3048	0/0:24,0:24:72.18:0,72,2739	0/0:31,0:31:87.30:0,87,3100	0/0:7,0:7:21.07:0,21,760	1/1:10,0:10:21.01:648,21,0	1/1:10,0:10:27.07:848,27,0	1/1:6,0:6:9.03:274,9,0	1/1:6,6:12:21.06:713,21,0	1/1:7,8:15:24.08:866,24,0	1/1:5,6:11:18.06:653,18,0	0/0:13,0:13:39.13:0,39,1088	0/0:15,0:15:45.12:0,45,1263	1/1:13,0:13:30.10:950,30,0	0/0:4,0:4:12.04:0,12,443
chr10	47452770	.	G	GT	5295.27	PASS	AB=0.804;AC=28;AF=0.500;AN=56;BaseQRankSum=-12.719;DP=387;FS=6.091;HRun=2;HaplotypeScore=222.5438;InbreedingCoeff=0.8093;MQ=60.55;MQ0=0;MQRankSum=0.069;QD=20.85;ReadPosRankSum=-6.899;VQSLOD=1.5801;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:2,29:30:56.23:612,56,0	1/1:1,5:6:17.75:115,18,0	0/1:7,4:11:72.04:150,0,72	0/1:6,1:7:27.22:27,0,74	1/1:2,14:16:38.57:272,39,0	0/0:10,0:10:17.73:0,18,56	0/0:17,0:17:31.08:0,31,98	1/1:2,37:39:96.32:886,96,0	0/0:12,0:12:22.20:0,22,70	1/1:1,15:16:45:467,45,0	1/1:1,9:10:26.27:178,26,0	0/0:10,0:10:15.54:0,16,49	0/0:20,0:20:28.86:0,29,91	0/0:11,0:11:19.62:0,20,61	1/1:0,26:25:73.82:518,74,0	1/1:1,22:23:65.37:506,65,0	1/1:3,28:31:77.11:633,77,0	1/1:0,7:7:20.94:184,21,0	0/0:7,0:7:15.36:0,15,48	0/0:9,0:9:15.03:0,15,51	0/0:3,0:3:7.12:0,7,25	0/0:6,0:6:12.92:0,13,40	0/0:9,0:9:9.55:0,10,32	0/0:6,0:6:9.92:0,10,32	1/1:1,12:13:32.69:291,33,0	1/1:1,13:14:38.97:392,39,0	0/0:13,0:13:22.20:0,22,70	1/1:1,3:4:8.93:63,9,0
chr10	47452773	.	AG	A	3196.96	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=3.456;DP=367;FS=2.713;HRun=3;HaplotypeScore=220.4160;InbreedingCoeff=0.8379;MQ=50.45;MQ0=0;MQRankSum=-4.934;QD=8.98;ReadPosRankSum=2.870;VQSLOD=1.3712;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,23:29:17.05:179,17,0	1/1:0,5:5:13.31:55,13,0	0/0:6,0:6:12.74:0,13,82	0/0:5,0:5:14.84:0,15,101	1/1:2,12:14:15.73:71,16,0	1/1:10,0:10:20.88:83,21,0	1/1:17,0:17:37.23:152,37,0	1/1:4,33:37:78.62:469,79,0	1/1:12,0:12:25.20:97,25,0	1/1:5,11:16:28.82:166,29,0	1/1:2,8:10:13.54:47,14,0	1/1:10,0:10:18.54:76,19,0	1/1:20,0:20:29.01:93,29,0	1/1:11,0:11:23.33:96,23,0	1/1:0,26:26:63.36:288,63,0	1/1:0,22:22:61.26:344,61,0	1/1:4,24:28:55.65:247,56,0	1/1:0,7:7:16.85:92,17,0	1/1:7,0:7:17.77:66,18,0	1/1:9,0:9:22.97:99,23,0	1/1:3,0:3:7.79:30,8,0	1/1:6,0:6:12.35:39,12,0	1/1:9,0:9:20.10:116,20,0	1/1:6,0:6:15.18:72,15,0	1/1:5,7:12:18.20:75,18,0	1/1:4,9:13:25.60:143,26,0	1/1:13,0:13:24.95:87,25,0	1/1:0,3:3:8.42:40,8,0
chr10	47452961	.	TC	T	4522.99	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=1.462;DP=693;FS=0.366;HRun=2;HaplotypeScore=90.6189;InbreedingCoeff=0.9995;MQ=82.28;MQ0=0;MQRankSum=-1.594;QD=35.61;ReadPosRankSum=2.022;VQSLOD=5.1901;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,144,2078	0/0:12,0:12:36.10:0,36,517	0/0:24,0:24:63.19:0,63,877	0/0:23,0:23:62.93:0,63,784	0/0:26,0:26:66.05:0,66,932	0/0:29,0:28:84.24:0,84,1196	0/0:24,0:24:69.22:0,69,1010	0/0:27,0:27:78.16:0,78,1083	0/0:26,0:26:78.18:0,78,1114	0/0:21,0:21:63.21:0,63,942	0/0:19,0:19:57.18:0,57,832	0/0:15,0:15:45.15:0,45,673	0/0:29,0:29:87.26:0,87,1261	1/1:0,22:22:60.20:778,60,0	0/0:32,0:32:90.16:0,90,1274	0/0:21,0:21:60.19:0,60,877	0/0:38,0:38:99:0,108,1556	0/0:26,0:26:75.16:0,75,1015	1/1:1,27:28:81.22:1021,81,0	1/1:1,25:26:69.22:895,69,0	1/1:0,25:25:69.22:896,69,0	0/0:18,0:18:54.18:0,54,807	0/0:20,0:20:60.15:0,60,849	0/0:22,0:22:60.19:0,60,878	0/0:20,0:20:60.20:0,60,898	0/0:34,0:34:99:0,102,1510	1/1:0,26:26:72.23:933,72,0	0/0:8,0:8:24.08:0,24,354
chr10	47453016	.	GAAA	G	2348.61	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=10.160;DP=688;FS=9.028;HRun=3;HaplotypeScore=119.4061;InbreedingCoeff=0.9760;MQ=92.26;MQ0=0;MQRankSum=-6.293;QD=49.97;ReadPosRankSum=0.613;VQSLOD=2.6718;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,154,3662	1/1:0,3:3:9.03:168,9,0	0/0:30,0:30:84.29:0,84,2039	0/0:32,0:32:93.28:0,93,2063	0/0:21,0:20:60.21:0,60,1412	0/0:30,0:30:90.31:0,90,2195	0/0:24,0:23:72.23:0,72,1711	1/1:1,18:19:57.19:1033,57,0	0/0:16,0:16:48.16:0,48,1182	0/0:25,0:25:75.26:0,75,1834	0/0:17,0:17:51.18:0,51,1223	0/0:20,0:20:57.20:0,57,1405	0/0:37,0:37:99:0,111,2621	0/0:27,0:27:78.25:0,78,1872	1/1:0,25:25:69.24:1286,69,0	0/0:27,0:27:78.27:0,78,1915	0/0:33,0:33:96.31:0,96,2286	0/0:31,0:31:93.32:0,93,2271	0/0:20,0:20:60.20:0,60,1425	0/0:16,0:16:45.15:0,45,1086	0/0:30,0:30:84.25:0,84,1946	0/0:22,0:22:66.23:0,66,1625	0/0:24,0:23:69.24:0,69,1650	0/0:31,0:31:93.32:0,93,2293	0/0:22,0:22:63.22:0,63,1560	0/0:24,0:24:72.25:0,72,1773	0/0:23,0:23:69.24:0,69,1696	0/0:6,0:6:18.06:0,18,444
chr10	47453326	.	CT	C	7089.81	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=13.696;DP=563;FS=8.473;HRun=3;HaplotypeScore=69.5200;InbreedingCoeff=0.9858;MQ=65.58;MQ0=0;MQRankSum=-2.241;QD=32.67;ReadPosRankSum=-0.011;VQSLOD=4.7237;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:66.22:0,66,948	1/1:0,10:10:27.01:333,27,0	0/0:9,0:9:27.06:0,27,341	0/0:7,0:7:11.63:0,12,140	0/0:30,0:30:84.27:0,84,1190	1/1:0,32:32:93.29:1152,93,0	1/1:1,14:15:39.12:483,39,0	1/1:2,21:23:60.14:716,60,0	0/0:16,0:16:48.13:0,48,664	0/0:34,0:34:99:0,99,1394	0/0:24,0:24:72.24:0,72,1026	0/0:9,0:9:24.08:0,24,345	0/0:20,0:20:60.19:0,60,843	1/1:1,19:20:51.16:632,51,0	1/1:0,21:21:57.18:706,57,0	0/0:23,0:23:69.22:0,69,969	0/0:16,0:16:42.14:0,42,605	0/0:14,0:14:42.11:0,42,579	1/1:1,18:19:54.15:655,54,0	1/1:1,30:31:84.22:1023,84,0	1/1:1,20:21:60.19:744,60,0	0/0:27,0:27:66.21:0,66,932	0/0:20,0:20:60.20:0,60,859	0/0:16,0:16:45.15:0,45,648	0/0:27,0:27:75.24:0,75,1054	0/0:21,0:21:57.18:0,57,799	1/1:1,24:25:54.06:648,54,0	0/0:4,0:4:9.03:0,9,130
chr10	47453798	.	TC	T	1775.27	PASS	AC=18;AF=0.346;AN=52;BaseQRankSum=1.592;DP=595;FS=6.237;HRun=4;HaplotypeScore=57.6625;InbreedingCoeff=0.8385;MQ=54.18;MQ0=54;MQRankSum=-5.401;QD=12.33;ReadPosRankSum=2.019;VQSLOD=1.3526;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:26:8.79:0,9,126	./.	0/0:35,0:26:74.95:0,75,1018	0/0:41,0:32:92.93:0,93,1213	1/1:4,14:16:23.76:252,24,0	0/0:14,0:10:9.03:0,9,126	0/0:26,0:18:12:0,12,146	0/0:34,0:14:42.05:0,42,529	0/0:14,0:13:6.02:0,6,84	1/1:5,16:18:42.10:488,42,0	1/1:0,9:9:11.78:125,12,0	0/0:23,0:16:5.98:0,6,62	0/0:16,0:10:12:0,12,145	0/0:22,0:17:11.45:0,11,145	0/0:24,0:21:18.06:0,18,243	1/1:0,24:21:27.08:323,27,0	1/1:2,18:15:9.03:108,9,0	1/1:2,16:17:6.02:72,6,0	0/0:32,0:10:30.10:0,30,420	0/0:15,0:12:24.08:0,24,326	0/0:29,0:23:24.08:0,24,336	0/0:17,0:14:18.06:0,18,247	0/0:17,0:11:8.98:0,9,120	./.	1/1:0,12:12:14.98:162,15,0	1/1:2,13:12:36.04:401,36,0	0/0:27,0:23:5.73:0,6,84	1/1:0,7:6:3.01:36,3,0
chr10	47455243	.	T	TGGGTAAAGGAATC	15398.66	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-4.423;DP=761;FS=0.412;HRun=0;HaplotypeScore=269.6254;InbreedingCoeff=0.9972;MQ=84.68;MQ0=0;MQRankSum=-12.921;QD=155.54;ReadPosRankSum=-0.185;VQSLOD=4.8260;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,120,4831	0/0:17,0:17:51.18:0,51,2126	0/0:26,0:26:75.26:0,75,2705	0/0:27,0:27:74.43:0,74,2551	0/0:27,0:27:81.28:0,81,2983	0/0:35,0:35:99:0,99,3916	0/0:26,0:26:78.27:0,78,3053	0/0:32,0:32:93.32:0,93,3471	0/0:36,0:36:99:0,108,4341	0/0:25,0:25:72.25:0,72,2758	0/0:13,0:13:39.13:0,39,1625	0/0:32,0:32:93.32:0,93,3779	0/0:33,0:33:93.29:0,93,3545	1/1:7,9:19:45.15:2555,45,0	0/0:35,0:35:99:0,99,3630	0/0:38,0:38:99:0,108,4189	0/0:39,0:39:99:0,108,3955	0/0:30,0:30:81.28:0,81,3114	1/1:7,3:15:39.11:1471,39,0	1/1:12,22:34:96.33:5868,96,0	1/1:2,6:9:21.07:1367,21,0	0/0:36,0:36:99:0,108,4066	0/0:29,0:29:87.30:0,87,3433	0/0:18,0:18:54.19:0,54,2265	0/0:21,0:21:63.21:0,63,2405	0/0:39,0:39:99:0,114,4282	1/1:6,14:22:63.22:4138,63,0	0/0:6,0:6:18.06:0,18,755
chr10	47455341	.	T	TACACACAC	4403.74	PASS	AB=0.779;AC=24;AF=0.462;AN=52;BaseQRankSum=-0.893;DP=740;FS=12.170;HRun=0;HaplotypeScore=204.9214;InbreedingCoeff=0.7738;MQ=56.55;MQ0=20;MQRankSum=-4.065;QD=12.88;ReadPosRankSum=-3.063;VQSLOD=2.4547;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:58:63.75:0,64,1253	1/1:4,0:8:9.50:194,10,0	./.	./.	1/1:34,0:34:11.48:154,11,0	1/1:17,0:35:21.05:376,21,0	1/1:15,0:30:8.72:117,9,0	0/1:25,0:29:6.47:6,0,121	0/0:22,0:24:47.74:0,48,976	1/1:19,21:42:64.22:1187,64,0	0/1:11,0:18:0:0,0,0	0/0:21,0:22:33.10:0,33,715	0/0:22,0:22:48.15:0,48,1021	0/0:9,0:20:30.10:0,30,555	1/1:16,0:32:14.98:281,15,0	0/0:14,0:28:32.78:0,33,553	1/1:19,1:29:9.03:309,9,0	1/1:11,10:26:5.46:581,5,0	0/0:12,0:16:9.29:0,9,168	0/0:12,0:18:19.38:0,19,244	0/0:30,0:28:2.93:0,3,68	0/0:29,0:33:38.95:0,39,847	0/0:15,0:17:13.28:0,13,270	0/0:17,0:20:32.84:0,33,801	1/1:11,13:25:3.01:123,3,0	1/1:25,0:23:42.14:972,42,0	0/0:12,0:16:12.16:0,12,239	1/1:5,0:5:6.02:104,6,0
chr10	47456216	.	GA	G	10567.14	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=11.764;DP=630;FS=2.968;HRun=1;HaplotypeScore=69.7306;InbreedingCoeff=0.9989;MQ=70.01;MQ0=0;MQRankSum=-1.580;QD=37.74;ReadPosRankSum=4.583;VQSLOD=5.4439;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:84.25:0,84,1295	0/0:9,0:9:27.09:0,27,431	0/0:11,0:11:19.92:0,20,386	0/0:20,0:20:55.43:0,55,853	0/0:24,0:24:63.20:0,63,982	0/0:21,0:21:63.21:0,63,1002	0/0:23,0:23:69.22:0,69,1071	0/0:16,0:16:36.12:0,36,575	1/1:0,18:18:39.13:546,39,0	0/0:16,0:16:48.16:0,48,765	0/0:11,0:11:27.09:0,27,432	1/1:0,26:26:72.24:1007,72,0	1/1:0,33:33:93.31:1301,93,0	1/1:0,38:38:99:1547,111,0	0/0:33,0:33:99:0,99,1571	0/0:25,0:25:75.26:0,75,1193	0/0:30,0:30:84.27:0,84,1319	0/0:31,0:31:93.29:0,93,1447	1/1:0,12:12:36.07:463,36,0	1/1:0,20:20:60.20:839,60,0	1/1:0,46:46:99:1762,126,0	1/1:0,20:20:51.17:710,51,0	1/1:0,20:20:42.14:587,42,0	1/1:0,24:24:72.24:1007,72,0	0/0:12,0:12:33.11:0,33,527	0/0:22,0:22:66.23:0,66,1051	1/1:0,23:23:57.19:797,57,0	0/0:16,0:16:48.16:0,48,767
chr10	47457091	.	A	AT	1710.64	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-9.881;DP=606;FS=13.063;HRun=8;HaplotypeScore=57.1516;InbreedingCoeff=0.9970;MQ=89.03;MQ0=0;MQRankSum=-2.017;QD=27.15;ReadPosRankSum=1.098;VQSLOD=3.3847;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,147,1328	1/1:1,7:8:21.06:242,21,0	0/0:28,0:28:65.65:0,66,564	0/0:21,1:21:25.91:0,26,315	0/0:18,0:18:48.02:0,48,438	1/1:2,17:19:53.83:600,54,0	1/1:3,11:14:33.09:371,33,0	0/0:29,0:29:72.03:0,72,659	0/0:16,0:16:42.01:0,42,384	0/0:30,0:30:78.04:0,78,714	0/0:16,0:16:30.07:0,30,345	0/0:25,0:25:75.02:0,75,681	0/0:21,0:21:55.82:0,56,494	0/0:24,0:24:69.03:0,69,632	1/1:1,21:22:57.17:658,57,0	0/0:16,0:16:45.02:0,45,412	0/0:19,0:19:57.03:0,57,521	0/0:22,0:22:57.03:0,57,521	0/0:12,0:12:33.02:0,33,302	0/0:16,0:16:45.02:0,45,411	0/0:23,0:24:68.05:0,68,603	0/0:15,0:15:39.02:0,39,357	0/0:24,0:24:69.02:0,69,627	0/0:22,0:22:57:0,57,513	0/0:21,0:21:48.01:0,48,439	0/0:34,0:34:90.04:0,90,824	0/0:27,0:25:71.99:0,72,648	0/0:8,0:8:21.01:0,21,192
chr10	47459607	.	G	GT	2774.41	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=-10.606;DP=512;FS=36.420;HRun=8;HaplotypeScore=55.3101;InbreedingCoeff=0.8944;MQ=70.97;MQ0=0;MQRankSum=1.358;QD=25.69;ReadPosRankSum=0.363;VQSLOD=1.5253;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:72.04:0,72,659	0/0:9,0:9:27.01:0,27,247	0/0:11,1:12:8.58:0,9,119	0/1:8,0:8:27.11:27,0,75	1/1:1,11:12:33.10:381,33,0	0/0:29,0:29:74.95:0,75,671	0/0:18,0:18:48.01:0,48,434	0/0:42,0:42:98.60:0,99,882	0/0:19,0:19:51.02:0,51,463	1/1:3,13:16:36.11:416,36,0	1/1:0,7:7:21.06:242,21,0	0/0:20,0:20:54.02:0,54,494	0/0:24,0:24:60:0,60,541	0/0:19,0:19:51.01:0,51,461	0/0:22,0:22:63.03:0,63,576	0/0:16,0:16:45.02:0,45,411	1/1:3,18:21:51.15:588,51,0	1/1:2,8:10:21.06:242,21,0	0/0:17,0:17:41.97:0,42,372	0/0:24,0:24:69.03:0,69,630	0/0:13,0:13:32.97:0,33,293	0/0:22,0:22:57.03:0,57,521	0/0:25,0:25:71.88:0,72,645	0/0:15,0:15:39.01:0,39,357	1/1:1,3:4:9.03:104,9,0	1/1:0,14:14:42.09:461,42,0	0/0:30,0:30:84.01:0,84,760	1/1:1,15:16:45.13:519,45,0
chr10	47460725	.	TATCCTTTATAAGAGTTGCCGTG	T	10475.87	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=8.253;DP=831;FS=3.412;HRun=0;HaplotypeScore=519.7999;InbreedingCoeff=0.9456;MQ=54.41;MQ0=9;MQRankSum=-8.968;QD=96.11;ReadPosRankSum=1.008;VQSLOD=4.1603;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,141,12606	1/1:2,13:15:33.08:2037,33,0	0/0:22,0:8:24.06:0,24,1886	0/0:31,0:21:63.21:0,63,4941	0/0:25,0:25:69.24:0,69,6443	1/1:2,26:28:51.18:3121,51,0	1/1:5,24:29:30.10:1797,30,0	0/0:48,0:47:99:0,141,11881	0/0:28,0:28:59.28:0,59,6057	0/0:33,0:33:69.30:0,69,7631	0/0:20,0:20:60.21:0,60,4382	0/0:48,0:48:41.47:0,41,10981	0/0:35,0:35:99:0,102,8643	0/0:28,0:28:81.28:0,81,6829	1/1:4,33:37:57.20:3521,57,0	0/0:24,0:24:41.15:0,41,5328	0/0:33,0:33:75.22:0,75,7320	0/0:38,0:38:99:0,114,9200	0/0:22,0:20:36.67:0,37,3977	0/0:32,0:32:71.33:0,71,7949	0/0:31,0:29:62.30:0,62,6691	0/0:25,0:24:39.69:0,40,5070	0/0:27,0:27:75.26:0,75,6525	0/0:31,0:31:61.52:0,62,7356	0/0:29,0:29:83.74:0,84,7251	0/0:30,0:30:87.28:0,87,7212	0/0:27,0:27:78.27:0,78,6686	0/0:8,0:8:2.08:0,2,1538
chr10	47461865	.	TG	T	165.86	PASS	AC=6;AF=0.188;AN=32;BaseQRankSum=0.049;DP=755;FS=3.626;HRun=2;HaplotypeScore=42.2907;InbreedingCoeff=0.6130;MQ=12.08;MQ0=624;MQRankSum=-0.760;QD=2.24;ReadPosRankSum=1.276;VQSLOD=-0.6987;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	1/1:3,6:5:15.05:194,15,0	./.	./.	0/0:19,0:14:24.08:0,24,358	1/1:26,1:1:3.01:39,3,0	1/1:35,3:1:3.01:39,3,0	./.	./.	0/0:17,0:6:18.06:0,18,260	0/0:21,0:13:36.12:0,36,537	./.	0/0:21,0:2:6.02:0,6,81	./.	./.	0/0:30,0:1:3.01:0,3,37	0/0:41,0:1:3.01:0,3,45	./.	./.	0/0:25,0:16:33.11:0,33,493	./.	0/0:25,0:16:33.11:0,33,487	0/0:24,0:16:33.11:0,33,492	./.	0/0:22,0:20:48.16:0,48,715	0/0:28,0:7:21.02:0,21,288	0/0:22,0:1:3.01:0,3,45	0/0:11,0:5:9.03:0,9,135
chr10	47462905	.	T	TG	120.59	PASS	AB=1.000;AC=13;AF=0.722;AN=18;BaseQRankSum=-1.589;DP=28;FS=0.000;HRun=0;HaplotypeScore=13.7039;MQ=102.49;MQ0=4;MQRankSum=-1.589;QD=8.04;ReadPosRankSum=-1.067;VQSLOD=2.7879;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	1/1:0,1:1:3.01:42,3,0	0/0:6,0:4:1.01:0,1,14	./.	./.	./.	1/1:3,1:3:3.01:44,3,0	1/1:0,1:1:3.01:43,3,0	./.	./.	./.	1/1:1,2:3:3.01:44,3,0	./.	./.	1/1:1,2:3:2.97:20,3,0	./.	./.	./.	0/1:1,0:1:0:0,0,0	./.	0/1:1,0:1:0:0,0,0	0/1:1,0:1:0:0,0,0	./.	./.	./.	./.	./.	./.
chr10	47463143	.	A	AT	2745.62	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-10.560;DP=760;FS=0.000;HRun=6;HaplotypeScore=73.5396;InbreedingCoeff=0.9998;MQ=83.68;MQ0=0;MQRankSum=0.477;QD=30.85;ReadPosRankSum=0.330;VQSLOD=3.9660;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,114,1155	1/1:0,12:12:36.12:453,36,0	0/0:27,0:27:59.35:0,59,587	0/0:23,0:23:31.75:0,32,422	0/0:28,0:28:72.13:0,72,722	1/1:0,13:13:36.12:453,36,0	1/1:3,31:34:84.27:1057,84,0	0/0:48,0:48:99:0,138,1408	0/0:21,0:21:63.14:0,63,643	0/0:34,0:34:96.21:0,96,972	0/0:24,0:24:66.15:0,66,673	0/0:39,0:39:99:0,102,1041	0/0:31,0:31:87.20:0,87,887	0/0:31,0:31:84.18:0,84,856	1/1:2,28:30:75.24:944,75,0	0/0:26,0:26:72.16:0,72,735	0/0:34,0:34:99:0,99,1010	0/0:25,0:25:63.08:0,63,624	0/0:12,0:12:33.07:0,33,336	0/0:28,0:28:75.15:0,75,757	0/0:34,0:34:96.22:0,96,979	0/0:23,0:23:66.13:0,66,665	0/0:21,0:21:48.10:0,48,489	0/0:27,0:27:72.16:0,72,735	0/0:19,0:19:48.10:0,48,490	0/0:27,0:27:69.15:0,69,704	0/0:30,0:30:87.19:0,87,887	0/0:18,0:18:54.12:0,54,551
chr10	47463966	.	A	ACC	1941.72	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-2.075;DP=528;FS=14.340;HRun=7;HaplotypeScore=90.4364;InbreedingCoeff=0.9806;MQ=86.49;MQ0=0;MQRankSum=-4.382;QD=29.87;ReadPosRankSum=2.592;VQSLOD=2.3206;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:72.18:0,72,815	1/1:1,7:9:23.29:352,23,0	0/0:16,0:15:27.01:0,27,300	0/0:22,0:23:47.88:0,48,495	0/0:9,0:9:21.04:0,21,244	1/1:3,10:15:27.09:443,27,0	1/1:3,14:20:34.58:469,35,0	0/0:21,0:21:48.11:0,48,542	0/0:22,0:22:63.17:0,63,722	0/0:15,0:15:33.08:0,33,376	0/0:10,0:10:30.03:0,30,323	0/0:28,0:28:78.20:0,78,886	0/0:19,0:19:48.12:0,48,546	0/0:19,0:19:48.07:0,48,529	1/1:0,21:21:51.17:837,51,0	0/0:14,0:14:39.11:0,39,453	0/0:38,0:38:99:0,102,1186	0/0:23,0:23:63.17:0,63,732	0/0:11,0:11:30.09:0,30,348	0/0:11,0:11:24.05:0,24,275	0/0:23,0:23:60.13:0,60,676	0/0:19,0:19:45.09:0,45,502	0/0:17,0:17:48.14:0,48,556	0/0:36,0:36:99:0,102,1175	0/0:19,0:18:45.12:0,45,523	0/0:17,0:17:42.11:0,42,479	0/0:21,0:21:57.15:0,57,652	0/0:3,0:3:9.03:0,9,105
chr10	47464854	.	C	CATGGCCGTG	72644.86	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-8.972;DP=787;FS=12.849;HRun=0;HaplotypeScore=198.0059;InbreedingCoeff=0.9970;MQ=74.05;MQ0=0;MQRankSum=-15.149;QD=107.46;ReadPosRankSum=2.495;VQSLOD=4.8851;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:56:99:0,169,4843	1/1:5,7:14:27.09:1254,27,0	0/0:25,0:25:72.23:0,72,1883	0/0:29,0:30:39.19:0,39,1858	1/1:10,14:29:30.10:1399,30,0	1/1:4,19:24:69.18:3187,69,0	1/1:15,16:33:87.16:3571,87,0	1/1:25,20:49:99:5915,147,0	1/1:10,17:31:78.27:3651,78,0	1/1:7,18:30:84.23:3472,84,0	1/1:5,8:15:33.11:1447,33,0	1/1:10,17:31:75.26:3314,75,0	1/1:5,16:23:63.22:2782,63,0	1/1:9,23:39:96.33:4520,96,0	1/1:12,24:39:96.33:4496,96,0	1/1:12,31:46:99:5899,126,0	1/1:9,7:19:43.39:1848,43,0	1/1:4,3:9:24.08:1180,24,0	1/1:7,5:17:45.09:1476,45,0	1/1:5,13:20:54.18:2408,54,0	1/1:7,5:17:24.08:1027,24,0	1/1:8,17:32:60.21:2920,60,0	1/1:3,8:15:33.10:1489,33,0	1/1:10,12:24:42.14:1934,42,0	1/1:7,14:24:51.18:2519,51,0	1/1:14,25:43:99:4618,114,0	1/1:8,29:42:99:5169,105,0	1/1:3,7:11:24.08:1150,24,0
chr10	47465507	.	GAAAAA	G	9506.70	PASS	AB=0.581;AC=48;AF=0.857;AN=56;BaseQRankSum=2.284;DP=531;FS=11.745;HRun=17;HaplotypeScore=112.7567;InbreedingCoeff=0.5457;MQ=50.34;MQ0=42;MQRankSum=-2.850;QD=21.75;ReadPosRankSum=5.679;VQSLOD=1.3859;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:34:55.08:0,55,1576	0/1:2,1:10:18.27:68,0,18	0/0:29,0:6:11.40:0,11,185	0/0:27,0:5:1.46:0,1,58	1/1:7,8:18:17.58:255,18,0	0/1:6,1:17:9.52:81,0,10	1/1:4,2:17:1.22:150,1,0	1/1:12,4:17:13.30:216,13,0	1/1:8,15:23:41.89:632,42,0	1/1:5,15:19:35.83:512,36,0	1/1:5,10:16:29.72:434,30,0	1/1:4,15:19:42.08:632,42,0	1/1:2,15:19:38.49:535,38,0	1/1:4,10:14:20.89:303,21,0	1/1:3,1:16:6.86:116,7,0	1/1:4,1:15:29.89:308,30,0	1/1:7,21:32:53.35:744,53,0	1/1:5,14:21:38.38:519,38,0	1/1:6,9:14:28.74:431,29,0	1/1:4,8:15:23.91:329,24,0	1/1:3,14:15:26.90:406,27,0	1/1:7,11:19:25.81:409,26,0	1/1:2,11:14:25.99:341,26,0	1/1:9,14:25:38.79:555,39,0	1/1:1,7:9:18.02:255,18,0	1/1:4,18:23:44.68:630,45,0	1/1:2,16:20:36.05:510,36,0	1/1:2,3:5:8.94:135,9,0
chr10	47466729	.	CA	C	784.26	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-0.558;DP=543;FS=1.393;HRun=2;HaplotypeScore=87.8711;InbreedingCoeff=0.9719;MQ=70.83;MQ0=3;MQRankSum=-1.675;QD=21.78;ReadPosRankSum=-3.753;VQSLOD=2.6544;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:60.46:0,60,814	0/0:9,0:9:24.02:0,24,247	0/0:34,0:15:24.74:0,25,236	0/0:29,0:15:15.74:0,16,155	0/0:32,0:32:86.29:0,86,1079	0/0:21,0:21:54.51:0,55,545	0/0:21,0:21:59.70:0,60,616	1/1:25,11:36:92.40:879,92,0	0/0:24,0:24:68.72:0,69,671	0/0:23,0:23:69.17:0,69,844	0/0:12,0:12:35.99:0,36,426	0/0:13,0:13:38.90:0,39,368	0/0:14,0:14:37.91:0,38,425	0/0:10,0:10:29.05:0,29,272	0/0:17,0:17:40.43:0,40,325	0/0:14,0:14:36.71:0,37,388	0/0:28,0:28:81.18:0,81,987	0/0:21,0:21:54.12:0,54,659	0/0:17,0:17:47.08:0,47,452	0/0:20,0:20:54.05:0,54,577	0/0:9,0:9:23.54:0,24,231	0/0:13,0:13:36.04:0,36,362	0/0:14,0:14:42.03:0,42,441	0/0:23,0:23:64.92:0,65,674	0/0:7,0:7:18.06:0,18,230	0/0:18,0:18:54.14:0,54,665	0/0:24,0:24:70.01:0,70,701	0/0:17,0:17:39.04:0,39,438
chr10	47466745	.	T	TA	7255.72	PASS	AB=1.000;AC=51;AF=0.911;AN=56;BaseQRankSum=-2.678;DP=639;FS=3.672;HRun=6;HaplotypeScore=82.2851;InbreedingCoeff=0.7672;MQ=69.83;MQ0=10;MQRankSum=-0.973;QD=13.07;ReadPosRankSum=1.406;VQSLOD=4.0574;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:68.91:0,69,637	1/1:9,0:9:17.86:95,18,0	0/0:57,0:21:4.98:0,5,137	0/1:52,0:12:2.44:2,0,66	1/1:7,26:35:79.16:846,79,0	1/1:24,0:24:25.21:175,25,0	1/1:23,1:24:45.48:237,45,0	1/1:14,0:27:57.51:439,58,0	1/1:23,0:23:39.52:199,40,0	1/1:6,17:24:51.10:555,51,0	1/1:5,13:18:29.83:270,30,0	1/1:16,1:17:38.34:246,38,0	1/1:20,1:21:38.52:255,39,0	1/1:12,0:12:24.13:174,24,0	1/1:15,0:15:32.16:180,32,0	1/1:16,1:17:34.10:214,34,0	1/1:5,24:30:63.17:724,63,0	1/1:4,19:23:36.11:420,36,0	1/1:19,0:19:8.54:89,9,0	1/1:22,0:22:13.83:163,14,0	1/1:9,0:9:14.60:76,15,0	1/1:17,0:17:39.13:243,39,0	1/1:15,1:16:30.76:215,31,0	1/1:25,0:25:50.10:267,50,0	1/1:0,9:11:18.02:188,18,0	1/1:4,16:21:47.18:460,47,0	1/1:25,2:27:43.68:312,44,0	1/1:3,14:17:18.05:210,18,0
chr10	47466767	.	GGAA	G	709.18	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=1.422;DP=605;FS=11.730;HRun=0;HaplotypeScore=109.9001;InbreedingCoeff=0.9525;MQ=68.71;MQ0=8;MQRankSum=-3.044;QD=33.77;ReadPosRankSum=-3.501;VQSLOD=3.0513;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:69.24:0,69,1541	0/0:8,0:8:24.08:0,24,518	0/0:42,0:22:17.17:0,17,686	0/0:44,0:16:11.86:0,12,335	0/0:32,0:32:84.29:0,84,1835	0/0:22,0:22:66.23:0,66,1460	0/0:25,0:25:63.22:0,63,1352	1/1:4,17:21:51.17:804,51,0	0/0:20,0:20:57.20:0,57,1259	0/0:19,0:19:51.18:0,51,1137	0/0:13,0:13:36.12:0,36,803	0/0:18,0:18:51.18:0,51,1124	0/0:18,0:18:51.18:0,51,1114	0/0:19,0:19:54.19:0,54,1206	0/0:21,0:21:60.19:0,60,1282	0/0:19,0:19:57.20:0,57,1273	0/0:32,0:32:87.30:0,87,1846	0/0:20,0:20:48.16:0,48,1021	0/0:19,0:19:54.19:0,54,1170	0/0:22,0:22:63.20:0,63,1346	0/0:15,0:15:42.10:0,42,851	0/0:16,0:16:45.15:0,45,998	0/0:20,0:20:54.18:0,54,1179	0/0:21,0:21:60.16:0,60,1245	0/0:11,0:11:21.07:0,21,469	0/0:22,0:22:57.20:0,57,1253	0/0:25,0:25:69.24:0,69,1541	0/0:14,0:14:24.08:0,24,536
chr10	47466916	.	TACCCACG	T	558.97	PASS	AB=0.923;AC=3;AF=0.054;AN=56;BaseQRankSum=5.566;DP=638;FS=0.000;HRun=0;HaplotypeScore=140.3385;InbreedingCoeff=0.6453;MQ=59.33;MQ0=2;MQRankSum=-5.510;QD=16.44;ReadPosRankSum=1.322;VQSLOD=2.3289;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,102,4197	0/0:19,0:19:57.17:0,57,2136	0/0:27,0:17:48.16:0,48,1812	0/0:31,0:25:75.08:0,75,2617	0/0:23,0:23:69.24:0,69,2808	0/0:27,0:27:81.26:0,81,3066	0/0:33,0:33:99:0,99,4013	0/0:38,0:38:99:0,111,4241	0/0:21,0:21:60.21:0,60,2325	1/1:1,9:10:27.09:602,27,0	0/0:18,0:18:54.17:0,54,2055	0/0:12,0:12:33.11:0,33,1376	0/0:18,0:18:54.19:0,54,2247	0/0:17,0:17:51.18:0,51,2055	0/0:22,0:22:66.20:0,66,2410	0/0:18,0:18:54.19:0,54,1716	0/0:40,0:39:99:0,120,4811	0/0:17,0:17:51.18:0,51,2044	0/0:27,0:24:66.22:0,66,2490	0/0:22,0:22:66.21:0,66,2589	0/0:33,0:33:99:0,99,4068	0/0:13,0:13:39.13:0,39,1552	0/0:9,0:9:27.09:0,27,1059	0/0:26,0:26:78.27:0,78,3161	0/0:19,0:19:51.18:0,51,2056	0/1:22,2:23:62.81:63,0,2257	0/0:31,0:31:93.29:0,93,3738	0/0:8,0:8:24.08:0,24,1005
chr10	47466924	.	TGG	T	281.12	PASS	AB=0.923;AC=3;AF=0.054;AN=56;BaseQRankSum=6.261;DP=659;FS=2.281;HRun=2;HaplotypeScore=78.7794;InbreedingCoeff=0.6475;MQ=58.68;MQ0=3;MQRankSum=-3.921;QD=7.60;ReadPosRankSum=-0.097;VQSLOD=0.3729;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,117,2254	0/0:18,0:18:54.19:0,54,1095	0/0:25,0:17:51.17:0,51,959	0/0:34,0:27:80.83:0,81,1422	0/0:23,0:23:69.22:0,69,1342	0/0:26,0:26:78.25:0,78,1544	0/0:32,0:32:96.33:0,96,1949	0/0:36,0:36:99:0,105,2032	0/0:21,0:21:63.22:0,63,1279	1/1:0,9:12:33.07:361,33,0	0/0:15,0:15:45.15:0,45,914	0/0:12,0:12:36.12:0,36,731	0/0:19,0:19:57.18:0,57,1098	0/0:20,0:20:60.19:0,60,1179	0/0:21,0:21:63.22:0,63,1269	0/0:19,0:19:57.17:0,57,1061	0/0:44,0:43:99:0,132,2611	0/0:17,0:17:51.18:0,51,1024	0/0:23,0:21:57.20:0,57,1146	0/0:22,0:22:66.23:0,66,1336	0/0:34,0:34:99:0,102,2003	0/0:13,0:13:39.11:0,39,742	0/0:9,0:9:27.09:0,27,525	0/0:30,0:30:87.26:0,87,1727	0/0:24,0:24:72.20:0,72,1338	0/1:22,2:23:26.24:26,0,1150	0/0:34,0:34:99:0,102,2027	0/0:11,0:11:33.11:0,33,651
chr10	47467040	.	T	TA	761.81	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-6.968;DP=598;FS=1.581;HRun=7;HaplotypeScore=65.0299;InbreedingCoeff=0.9642;MQ=71.85;MQ0=0;MQRankSum=0.596;QD=26.27;ReadPosRankSum=-4.018;VQSLOD=2.5785;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,105,1008	0/0:13,0:13:36.06:0,36,348	0/0:20,0:20:34.90:0,35,361	0/0:9,0:9:11.56:0,12,139	0/0:38,0:38:99:0,105,1014	0/0:26,0:24:72.10:0,72,687	0/0:20,0:20:45.06:0,45,434	1/1:5,24:29:72.21:857,72,0	0/0:11,0:11:24.03:0,24,231	0/0:24,0:24:66.05:0,66,625	0/0:15,0:15:36.05:0,36,348	0/0:17,0:17:42.06:0,42,406	0/0:18,0:18:51.08:0,51,492	0/0:26,0:26:69.08:0,69,655	0/0:25,0:25:60.09:0,60,579	0/0:17,0:17:42.06:0,42,405	0/0:39,0:39:86.97:0,87,949	0/0:23,0:23:51.08:0,51,492	0/0:20,0:20:54.07:0,54,512	0/0:28,0:28:78.05:0,78,736	0/0:12,0:12:36.04:0,36,341	0/0:11,0:11:33.05:0,33,319	0/0:22,0:22:66.10:0,66,634	0/0:20,0:20:57.09:0,57,550	0/0:22,0:22:60.10:0,60,579	0/0:23,0:23:63.09:0,63,605	0/0:21,0:21:60.10:0,60,579	0/0:11,0:11:33.05:0,33,319
chr10	47467217	.	A	AC	5899.50	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=7.753;DP=715;FS=4.067;HRun=1;HaplotypeScore=156.5176;InbreedingCoeff=0.9947;MQ=87.61;MQ0=0;MQRankSum=-2.853;QD=35.33;ReadPosRankSum=1.868;VQSLOD=4.4847;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:59,0:59:99:0,175,2227	0/0:11,0:11:33.11:0,33,428	0/0:24,0:24:72.20:0,72,888	0/0:26,0:27:36.26:0,36,855	1/1:1,24:25:48.13:693,48,0	0/0:22,0:21:60.11:0,60,729	0/0:32,0:32:96.16:0,96,1163	0/0:33,0:33:96.30:0,96,1232	0/0:14,0:14:39.11:0,39,456	1/1:2,22:24:66.22:946,66,0	1/1:0,22:22:54.18:780,54,0	0/0:27,0:27:71.55:0,72,890	0/0:26,0:26:73.84:0,74,870	0/0:36,0:36:99:0,105,1223	0/0:52,0:52:99:0,147,1870	0/0:15,0:15:45.15:0,45,584	1/1:2,23:25:63.17:914,63,0	1/1:1,14:15:39.13:563,39,0	0/0:26,0:26:65.95:0,66,798	0/0:18,0:18:51.09:0,51,580	0/0:50,0:50:99:0,139,1658	0/0:15,0:15:42.13:0,42,505	0/0:15,0:15:39.10:0,39,459	0/0:28,0:28:84.24:0,84,991	1/1:1,20:21:48.12:694,48,0	1/1:1,28:29:78.61:1144,79,0	0/0:18,0:18:48.15:0,48,578	1/1:1,5:6:12.02:166,12,0
chr10	47467853	.	TTA	T	9019.67	PASS	AB=0.771;AC=42;AF=0.750;AN=56;BaseQRankSum=8.584;DP=437;FS=16.781;HRun=0;HaplotypeScore=60.6111;InbreedingCoeff=0.6521;MQ=66.83;MQ0=1;MQRankSum=-0.258;QD=23.19;ReadPosRankSum=3.449;VQSLOD=4.1574;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:15,0:15:14.07:14,0,356	0/0:9,0:9:21.06:0,21,318	0/0:4,0:4:3.01:0,3,30	0/0:7,0:6:5.91:0,6,50	1/1:6,21:26:20.45:547,20,0	0/0:13,2:15:1.93:0,2,519	0/0:8,0:8:21.07:0,21,344	1/1:8,0:36:73.72:362,74,0	1/1:0,8:8:18.06:223,18,0	1/1:2,20:22:57.17:694,57,0	1/1:6,20:26:48.15:595,48,0	1/1:0,7:7:18.06:223,18,0	1/1:3,10:13:27.08:335,27,0	1/1:2,12:14:27.08:335,27,0	0/0:5,0:5:9.03:0,9,148	1/1:4,10:14:27.08:335,27,0	1/1:6,14:20:36.11:445,36,0	1/1:4,22:26:45.14:558,45,0	1/1:7,16:23:48.13:581,48,0	1/1:5,17:22:48.15:595,48,0	1/1:0,4:5:9.03:112,9,0	1/1:1,4:5:12:131,12,0	0/1:2,11:13:19.11:305,0,19	1/1:1,1:2:3.01:37,3,0	1/1:7,10:17:18.06:223,18,0	1/1:2,29:31:87.27:1069,87,0	1/1:3,19:22:47.73:594,48,0	1/1:1,20:21:57.18:707,57,0
chr10	47468732	.	CGTGTGTGTGTGT	C	2815.93	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=6.623;DP=720;FS=57.547;HRun=0;HaplotypeScore=232.6225;InbreedingCoeff=0.8356;MQ=45.16;MQ0=19;MQRankSum=-7.251;QD=32.74;ReadPosRankSum=-0.567;VQSLOD=0.9952;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:35:45.61:0,46,1824	1/1:3,11:14:14.67:357,15,0	0/0:55,0:25:24.70:0,25,838	0/0:62,0:29:24.07:0,24,802	0/0:15,0:15:14.95:0,15,889	1/1:8,17:25:24.04:544,24,0	1/1:6,14:20:30.06:919,30,0	0/0:33,0:33:48.16:0,48,1554	0/0:17,0:29:21.07:0,21,569	0/0:30,0:32:66.22:0,66,2698	0/0:11,0:11:24.08:0,24,1185	0/0:23,0:36:14.68:0,15,343	0/0:7,0:14:5.91:0,6,177	0/0:11,0:26:3.01:0,3,74	1/1:8,19:27:39.05:1151,39,0	0/0:19,0:33:53.71:0,54,2431	0/0:18,0:18:45.15:0,45,2291	0/0:23,0:24:51.17:0,51,2599	0/0:10,0:8:12.04:0,12,292	0/0:19,0:19:14.87:0,15,373	0/0:34,0:34:26.65:0,27,672	0/0:8,0:18:6.91:0,7,208	0/0:7,0:10:9.03:0,9,263	0/0:19,0:36:8.68:0,9,110	0/0:23,0:23:39.13:0,39,2143	0/0:22,0:24:51.18:0,51,2435	0/0:11,0:16:9.02:0,9,237	0/0:17,0:17:39.07:0,39,1737
chr10	47468797	.	T	TGGATACACATGCTATGAG	20898.25	PASS	AB=0.719;AC=54;AF=0.964;AN=56;BaseQRankSum=2.028;DP=327;FS=52.942;HRun=0;HaplotypeScore=373.1198;InbreedingCoeff=-0.0620;MQ=55.90;MQ0=2;MQRankSum=-3.456;QD=63.91;ReadPosRankSum=2.289;VQSLOD=2.8103;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:12,0:12:18.01:532,18,0	1/1:7,0:7:5.93:40,6,0	0/1:6,1:11:27.90:1026,0,28	0/1:4,0:6:44.67:322,0,45	1/1:8,0:8:6.46:54,6,0	1/1:18,0:18:20.82:914,21,0	1/1:9,0:9:13.60:580,14,0	1/1:12,0:11:30.10:1314,30,0	1/1:10,0:10:12.04:396,12,0	1/1:25,0:25:69.22:4058,69,0	1/1:11,0:10:12.18:149,12,0	1/1:14,0:14:21.06:959,21,0	1/1:10,0:10:18.53:660,19,0	1/1:16,0:16:6.02:314,6,0	1/1:26,0:26:26.79:911,27,0	1/1:12,0:12:20.98:665,21,0	1/1:10,0:10:18.03:620,18,0	1/1:7,0:7:9.03:353,9,0	1/1:4,0:4:9.03:578,9,0	1/1:17,0:17:27.08:1095,27,0	1/1:8,0:8:12.04:572,12,0	1/1:12,0:12:12.04:691,12,0	1/1:12,0:12:17.97:398,18,0	1/1:14,0:14:20.41:371,20,0	1/1:11,0:11:15.05:524,15,0	1/1:11,0:11:27.09:1690,27,0	1/1:9,0:9:15.42:620,15,0	1/1:5,0:5:15.05:494,15,0
chr10	47469506	.	AC	A	1340.47	PASS	AB=0.625;AC=39;AF=0.886;AN=44;BaseQRankSum=-3.398;DP=113;FS=4.248;HRun=7;HaplotypeScore=16.8461;InbreedingCoeff=0.1306;MQ=63.45;MQ0=0;MQRankSum=1.016;QD=15.06;ReadPosRankSum=2.295;VQSLOD=1.7395;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	1/1:2,0:2:6.01:60,6,0	1/1:2,0:2:2.29:6,2,0	0/0:6,0:3:0.61:0,1,29	./.	1/1:2,2:4:6.01:61,6,0	1/1:1,12:13:12.60:146,13,0	1/1:2,2:4:1.35:27,1,0	1/1:0,3:3:5.92:44,6,0	1/1:3,2:5:6.01:61,6,0	./.	1/1:1,3:4:6:55,6,0	1/1:0,1:1:3.01:31,3,0	1/1:0,4:4:5.95:49,6,0	1/1:1,6:7:14.97:149,15,0	1/1:0,8:8:15:147,15,0	1/1:0,7:7:18.03:177,18,0	1/1:2,3:5:11.96:109,12,0	0/1:2,3:5:9.86:90,0,10	1/1:1,0:1:3:26,3,0	./.	1/1:5,1:6:12.01:114,12,0	./.	0/0:0,5:5:1.25:0,1,3	1/1:0,3:3:3:25,3,0	1/1:0,2:2:2.40:29,2,0	1/1:0,3:3:3.01:30,3,0	./.
chr10	47477541	.	GC	G	370.98	PASS	AB=1.000;AC=25;AF=0.962;AN=26;DP=47;FS=0.000;HRun=1;HaplotypeScore=7.2644;InbreedingCoeff=-0.0425;MQ=65.55;MQ0=11;QD=10.60;VQSLOD=1.1460;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,0:4:3.01:34,3,0	./.	./.	0/1:4,0:2:0:0,0,0	1/1:0,3:3:6.02:83,6,0	1/1:2,2:2:3.01:42,3,0	./.	1/1:2,0:1:3:28,3,0	1/1:0,3:3:3.01:41,3,0	./.	./.	1/1:4,0:3:6.01:60,6,0	./.	./.	./.	./.	1/1:3,0:3:2.98:22,3,0	./.	./.	1/1:0,2:2:3.01:42,3,0	./.	1/1:1,0:1:3:25,3,0	./.	./.	./.	1/1:1,0:1:2.99:23,3,0	1/1:2,0:2:2.94:18,3,0	1/1:1,0:1:3:25,3,0
chr10	47478015	.	G	GC	4327.60	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-14.404;DP=829;FS=16.347;HRun=5;HaplotypeScore=80.4827;InbreedingCoeff=0.9999;MQ=80.58;MQ0=0;MQRankSum=-1.937;QD=33.81;ReadPosRankSum=1.446;VQSLOD=3.4025;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,138,1454	1/1:2,13:15:36.12:471,36,0	0/0:27,0:27:72.08:0,72,728	0/0:15,0:14:36.03:0,36,361	0/0:34,0:34:99:0,99,1062	1/1:2,31:33:93.30:1224,93,0	1/1:4,32:36:78.25:1024,78,0	0/0:18,0:18:48.11:0,48,509	0/0:34,0:34:99:0,99,1063	0/0:27,0:27:78.20:0,78,838	0/0:15,0:15:45.11:0,45,484	0/0:28,0:28:81.20:0,81,870	0/0:29,0:29:75.15:0,75,789	0/0:34,0:34:99:0,99,1048	1/1:2,42:44:99:1609,123,0	0/0:21,0:21:60.15:0,60,645	0/0:44,0:44:99:0,123,1322	0/0:33,0:33:99:0,99,1045	0/0:17,0:17:48.11:0,48,508	0/0:37,0:37:99:0,99,1063	0/0:44,0:44:99:0,126,1354	0/0:26,0:26:75.19:0,75,806	0/0:22,0:22:54.13:0,54,580	0/0:40,0:40:99:0,114,1225	0/0:22,0:22:60.15:0,60,645	0/0:35,0:35:96.23:0,96,1026	0/0:35,0:35:99:0,99,1055	0/0:13,0:13:39.10:0,39,419
chr10	47480063	.	G	GTT	13453.68	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-18.443;DP=685;FS=3.385;HRun=3;HaplotypeScore=103.2010;InbreedingCoeff=0.9995;MQ=87.82;MQ0=1;MQRankSum=-2.151;QD=46.07;ReadPosRankSum=3.693;VQSLOD=4.3478;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,117,1613	0/0:10,0:10:27.06:0,27,353	0/0:21,0:21:54.18:0,54,739	0/0:27,0:27:77.25:0,77,1018	0/0:23,0:23:63.21:0,63,881	0/0:29,0:29:81.25:0,81,1116	0/0:21,0:21:60.13:0,60,767	0/0:37,0:37:99:0,102,1394	1/1:2,18:21:51.17:931,51,0	0/0:26,0:26:72.23:0,72,985	0/0:25,0:25:72.19:0,72,1007	1/1:2,19:21:51.17:935,51,0	1/1:1,19:21:51.17:928,51,0	1/1:1,22:23:54.19:990,54,0	0/0:24,0:24:66.22:0,66,924	1/1:0,22:23:60.21:1100,60,0	0/0:38,0:38:99:0,108,1492	0/0:11,0:11:30.06:0,30,398	1/1:0,18:18:54.15:956,54,0	1/1:1,24:25:69.20:1215,69,0	1/1:0,27:28:75.26:1375,75,0	1/1:1,21:22:54.14:955,54,0	1/1:2,21:25:53.75:989,54,0	1/1:2,35:36:96.33:1760,96,0	0/0:20,0:20:57.19:0,57,798	0/0:29,0:29:84.28:0,84,1174	1/1:3,25:28:72.25:1320,72,0	0/0:9,0:9:24.08:0,24,335
chr10	47482294	.	ACAGC	A	14078.43	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=13.252;DP=711;FS=22.177;HRun=0;HaplotypeScore=148.4488;InbreedingCoeff=0.9923;MQ=81.91;MQ0=0;MQRankSum=-4.118;QD=40.81;ReadPosRankSum=5.118;VQSLOD=3.5579;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,129,3258	0/0:8,0:8:21.07:0,21,558	0/0:20,0:20:51.17:0,51,1277	0/0:29,0:29:72.49:0,72,1617	0/0:14,0:14:42.14:0,42,1034	0/0:14,0:14:42.14:0,42,1066	0/0:39,0:39:99:0,108,2743	0/0:23,0:23:54.19:0,54,1431	1/1:0,23:23:54.19:1008,54,0	0/0:15,0:15:42.14:0,42,1086	0/0:7,0:7:18.06:0,18,461	1/1:9,49:58:99:2406,129,0	1/1:1,24:25:54.14:1007,54,0	1/1:1,30:31:84.29:1567,84,0	0/0:23,0:23:63.22:0,63,1680	1/1:4,20:24:57.20:1064,57,0	0/0:45,0:45:99:0,135,3521	0/0:36,1:37:49.46:0,49,2446	1/1:2,17:19:51.14:889,51,0	1/1:1,11:12:21.07:391,21,0	1/1:2,73:75:99:2673,146,0	1/1:0,8:8:21.07:391,21,0	1/1:1,7:8:12.04:224,12,0	1/1:3,43:46:96.33:1791,96,0	0/0:16,0:16:45.15:0,45,1200	0/0:24,0:24:66.22:0,66,1606	1/1:2,14:16:35.66:668,36,0	0/0:7,0:7:21.07:0,21,471
chr10	47482454	.	TC	T	2524.27	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=3.457;DP=571;FS=15.975;HRun=1;HaplotypeScore=67.1497;InbreedingCoeff=0.9998;MQ=91.99;MQ0=0;MQRankSum=-0.843;QD=37.12;ReadPosRankSum=2.201;VQSLOD=2.4175;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:96.33:0,96,1534	1/1:0,12:12:36.12:503,36,0	0/0:29,0:29:87.27:0,87,1351	0/0:19,0:19:48.09:0,48,723	0/0:29,0:29:87.30:0,87,1386	1/1:0,16:16:48.16:671,48,0	1/1:0,19:19:51.17:713,51,0	0/0:37,0:37:99:0,111,1770	0/0:18,0:18:54.18:0,54,861	0/0:28,0:28:84.28:0,84,1315	0/0:17,0:17:48.16:0,48,762	0/0:24,0:24:72.25:0,72,1133	0/0:13,0:13:39.13:0,39,620	0/0:12,0:12:36.11:0,36,552	1/1:0,21:21:57.19:797,57,0	0/0:21,0:21:63.21:0,63,1006	0/0:26,0:26:75.26:0,75,1198	0/0:12,0:12:33.11:0,33,523	0/0:21,0:21:60.20:0,60,956	0/0:16,0:16:48.16:0,48,755	0/0:23,0:23:63.17:0,63,968	0/0:18,0:18:54.17:0,54,832	0/0:15,0:15:45.15:0,45,719	0/0:15,0:15:45.15:0,45,717	0/0:19,0:19:57.18:0,57,888	0/0:24,0:24:72.25:0,72,1147	0/0:16,0:16:48.16:0,48,766	0/0:19,0:19:57.19:0,57,906
chr10	47483193	.	GTTTTGTT	G	1245.37	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-2.989;DP=687;FS=3.724;HRun=0;HaplotypeScore=226.0646;InbreedingCoeff=0.9209;MQ=61.47;MQ0=0;MQRankSum=1.131;QD=38.92;ReadPosRankSum=-5.967;VQSLOD=1.8388;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:96.33:0,96,3416	0/0:11,0:11:30.10:0,30,810	0/0:7,0:4:9.03:0,9,286	0/0:18,0:14:14.29:0,14,653	0/0:21,0:21:51.16:0,51,1278	0/0:23,0:23:39.13:0,39,1112	0/0:34,0:34:84.26:0,84,2112	1/1:4,28:30:77.80:1340,78,0	0/0:27,0:27:60.21:0,60,1630	0/0:31,0:31:75.25:0,75,2272	0/0:21,0:21:63.22:0,63,1765	0/0:26,0:26:54.16:0,54,1415	0/0:23,0:23:54.19:0,54,1442	0/0:25,0:25:56.98:0,57,1704	0/0:21,0:21:54.19:0,54,1624	0/0:22,0:22:45.15:0,45,1384	0/0:42,0:42:99:0,106,2957	0/0:35,0:35:84.29:0,84,2411	0/0:28,0:26:57.17:0,57,1400	0/0:13,0:13:30.10:0,30,831	0/0:22,0:22:45.15:0,45,1232	0/0:21,0:21:51.18:0,51,1426	0/0:26,0:26:60.21:0,60,1692	0/0:35,0:35:84.29:0,84,2371	0/0:27,0:27:66.19:0,66,1813	0/0:30,0:30:81.27:0,81,2205	0/0:20,0:19:45.88:0,46,1325	0/0:12,0:12:18.06:0,18,432
chr10	47483200	.	T	TTTTTG	30204.83	PASS	AB=1.000;AC=50;AF=0.893;AN=56;BaseQRankSum=-8.574;DP=763;FS=2.023;HRun=0;HaplotypeScore=114.0031;InbreedingCoeff=0.6696;MQ=60.80;MQ0=0;MQRankSum=-0.497;QD=42.01;ReadPosRankSum=2.949;VQSLOD=4.7722;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:84.26:0,84,1503	1/1:2,9:11:24.08:639,24,0	0/0:10,0:6:9.02:0,9,141	0/1:19,0:15:0.04:0,0,259	1/1:11,10:24:24.08:650,24,0	1/1:2,22:25:33.11:949,33,0	1/1:11,27:38:57.19:1636,57,0	0/1:30,0:28:81.70:317,0,82	1/1:10,22:33:36.12:986,36,0	1/1:5,24:30:75.13:1755,75,0	1/1:6,16:23:42.06:1086,42,0	1/1:8,20:30:39.13:1100,39,0	1/1:6,21:28:39.13:1121,39,0	1/1:4,25:30:51.18:1467,51,0	1/1:3,22:27:48.16:1381,48,0	1/1:0,20:21:45.15:1294,45,0	1/1:11,35:46:84.27:2315,84,0	1/1:7,32:40:63.22:1812,63,0	1/1:11,16:28:53.77:987,54,0	1/1:3,16:19:39.13:823,39,0	1/1:7,17:25:36.12:987,36,0	1/1:6,17:26:39.13:1069,39,0	1/1:6,23:30:48.16:1278,48,0	1/1:9,29:39:66.22:1882,66,0	1/1:7,20:27:48.16:1378,48,0	1/1:3,28:32:84.21:2111,84,0	1/1:3,19:23:42.14:1146,42,0	1/1:12,0:12:3.01:36,3,0
chr10	47483936	.	ATCTGTCTG	A	2094.70	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=1.485;DP=602;FS=4.343;HRun=0;HaplotypeScore=184.1275;InbreedingCoeff=0.5878;MQ=50.72;MQ0=36;MQRankSum=1.260;QD=9.39;ReadPosRankSum=-2.575;VQSLOD=2.2089;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:31:75.22:0,75,2137	1/1:11,0:11:24.55:355,25,0	0/0:26,0:13:22.49:0,22,402	0/0:37,0:11:25.70:0,26,407	0/0:25,0:25:48.62:0,49,835	1/1:21,1:22:31.72:519,32,0	1/1:17,1:18:24.54:405,25,0	1/1:27,0:27:68.91:877,69,0	0/0:21,0:19:15.64:0,16,235	0/0:19,0:19:46.96:0,47,1089	0/0:15,0:15:11.71:0,12,256	0/0:14,0:14:10.13:0,10,136	0/1:16,0:16:7.08:7,0,67	0/0:24,0:23:13.69:0,14,182	1/1:10,10:20:9.01:84,9,0	0/0:24,0:24:38.69:0,39,783	0/0:21,0:21:30.04:0,30,792	0/0:17,0:17:37.01:0,37,842	0/1:21,0:19:5.02:5,0,47	0/1:29,0:26:0.86:1,0,138	0/1:15,0:15:2.62:3,0,96	0/1:26,0:25:10.08:10,0,18	0/0:21,0:19:5.84:0,6,113	1/1:18,0:17:1.81:3,2,0	0/0:25,0:25:51.06:0,51,1004	0/0:20,0:20:46.53:0,47,1269	0/0:28,0:27:34:0,34,578	0/0:10,0:10:15.03:0,15,234
chr10	47483942	.	CTGTCTG	C	2557.65	PASS	AB=1.000;AC=22;AF=0.393;AN=56;BaseQRankSum=4.563;DP=609;FS=25.651;HRun=0;HaplotypeScore=170.0963;InbreedingCoeff=0.2180;MQ=49.81;MQ0=38;MQRankSum=-1.031;QD=8.09;ReadPosRankSum=-5.148;VQSLOD=-0.5390;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:31:67.90:0,68,2045	1/1:7,1:11:26.68:405,27,0	0/0:24,0:11:22.49:0,22,402	0/0:36,0:10:25.70:0,26,407	0/0:25,0:25:48.37:0,48,792	1/1:15,3:21:32.03:547,32,0	1/1:17,0:17:24.54:381,25,0	1/1:2,26:28:72.54:1000,73,0	0/1:20,0:18:2.18:2,0,117	0/0:21,0:21:7.83:0,8,943	0/0:17,0:17:11.69:0,12,227	0/1:13,0:13:15.47:15,0,56	0/1:17,0:17:35.56:90,0,36	0/1:22,0:21:10.50:10,0,98	1/1:12,2:19:9.63:132,10,0	0/0:23,0:23:21.51:0,22,659	0/0:20,0:20:30.05:0,30,648	0/0:15,0:15:20.12:0,20,725	0/1:20,0:18:15.40:29,0,15	0/1:28,0:25:22.54:23,0,110	0/1:18,0:18:28.01:28,0,51	0/1:29,0:27:12.30:12,0,17	0/0:23,0:21:5.84:0,6,89	1/1:17,0:16:1.34:3,1,0	0/0:25,0:25:51.05:0,51,905	0/1:24,0:24:34.65:35,0,1006	0/0:32,0:31:31.37:0,31,407	0/1:12,0:11:28.54:29,0,189
chr10	47483946	.	CTG	C	3778.58	PASS	AB=1.000;AC=34;AF=0.607;AN=56;BaseQRankSum=2.908;DP=620;FS=14.987;HRun=0;HaplotypeScore=140.3095;InbreedingCoeff=0.8114;MQ=48.65;MQ0=38;MQRankSum=0.641;QD=10.10;ReadPosRankSum=-3.626;VQSLOD=1.5839;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:37:38.99:0,39,1114	1/1:9,3:12:23.57:187,24,0	0/0:23,0:8:10.29:0,10,149	0/0:34,0:8:11.94:0,12,166	0/0:26,0:26:44.76:0,45,375	1/1:16,3:19:25.80:238,26,0	1/1:18,0:18:23.99:210,24,0	1/1:27,0:27:60.86:444,61,0	1/1:22,0:20:22.22:179,22,0	0/0:22,0:22:21.27:0,21,410	0/0:17,0:17:11.98:0,12,102	1/1:14,0:14:14.91:120,15,0	1/1:16,0:16:35.71:289,36,0	1/1:21,0:20:20.77:191,21,0	1/1:14,5:19:7.88:74,8,0	0/0:24,0:24:20.78:0,21,299	0/0:20,0:20:19.50:0,19,265	0/0:17,0:17:19.84:0,20,315	1/1:20,0:18:44.86:354,45,0	1/1:27,0:24:44.49:368,44,0	1/1:18,0:18:27.87:217,28,0	1/1:28,0:26:43.25:343,43,0	1/1:25,0:23:23.97:198,24,0	1/1:17,0:16:14.98:124,15,0	0/0:25,0:25:43.71:0,44,407	0/1:25,0:25:63.12:63,0,410	1/1:34,0:33:13.20:147,13,0	0/1:12,0:11:31.65:32,0,72
chr10	47483948	.	G	GTCTCTCTC	3518.45	PASS	AB=0.987;AC=37;AF=0.740;AN=50;BaseQRankSum=0.806;DP=621;FS=29.335;HRun=0;HaplotypeScore=190.9472;InbreedingCoeff=0.4404;MQ=48.10;MQ0=38;MQRankSum=-1.916;QD=8.34;ReadPosRankSum=-3.415;VQSLOD=0.8283;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:36:28.29:0,28,1270	0/1:11,0:11:37.33:37,0,83	./.	./.	0/0:23,0:23:3.01:0,3,75	0/0:19,0:19:11.93:0,12,155	1/1:17,0:17:2.12:16,2,0	0/1:30,0:29:8.64:112,0,9	1/1:22,0:20:15.41:128,15,0	1/1:22,0:23:21.96:437,22,0	1/1:6,0:19:5.76:38,6,0	1/1:14,0:14:6.01:72,6,0	1/1:14,0:14:15.05:204,15,0	1/1:20,0:19:6.49:99,6,0	0/0:20,0:20:10.39:0,10,131	1/1:15,1:26:12.04:320,12,0	1/1:21,0:21:12.04:374,12,0	1/1:16,0:17:16.30:218,16,0	1/1:22,0:20:22.57:239,23,0	1/1:27,0:24:9.50:173,9,0	1/1:19,0:19:6.74:99,7,0	1/1:28,0:26:5.09:99,5,0	./.	0/0:17,0:16:3.45:0,3,68	0/1:24,0:25:8.16:8,0,19	1/1:22,0:23:42.26:741,42,0	1/1:33,0:32:2.95:25,3,0	1/1:11,0:10:6.02:79,6,0
chr10	47483978	.	C	CTG	2091.04	PASS	AB=0.997;AC=24;AF=0.429;AN=56;BaseQRankSum=3.604;DP=578;FS=13.196;HRun=0;HaplotypeScore=155.5119;InbreedingCoeff=0.4327;MQ=59.05;MQ0=13;MQRankSum=-0.771;QD=6.38;ReadPosRankSum=0.806;VQSLOD=2.4734;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:46:99:0,110,1287	1/1:11,0:11:15.01:134,15,0	0/0:32,0:19:43.14:0,43,425	0/1:25,0:18:34.02:34,0,119	0/1:20,0:20:24.78:25,0,33	1/1:15,0:15:8.13:36,8,0	1/1:14,1:15:2.80:49,3,0	0/1:36,1:36:6.69:497,0,7	0/0:17,0:16:17.07:0,17,137	0/1:20,0:20:13.67:287,0,14	1/1:23,0:23:29.71:245,30,0	0/0:14,0:14:22.18:0,22,170	0/0:11,0:11:5.27:0,5,111	0/0:22,0:21:25.22:0,25,192	1/1:23,0:23:35.67:244,36,0	0/1:19,0:19:19.65:20,0,108	0/1:25,0:25:2.36:116,0,2	1/1:5,8:13:7.75:69,8,0	0/0:17,0:16:32.57:0,33,209	0/0:17,0:16:23.70:0,24,191	0/0:16,0:16:26.45:0,26,214	0/0:12,0:12:8.53:0,9,71	0/1:24,0:23:0.09:0,0,0	0/0:19,0:18:23.89:0,24,196	0/1:24,0:24:13.62:14,0,31	1/1:25,0:25:22.24:352,22,0	0/0:26,0:25:17.58:0,18,190	1/1:8,1:9:14.97:160,15,0
chr10	47483980	.	C	CTCTCTCTGTG	7937.40	PASS	AB=0.959;AC=27;AF=0.482;AN=56;BaseQRankSum=-5.372;DP=597;FS=4.564;HRun=0;HaplotypeScore=206.2833;InbreedingCoeff=0.1859;MQ=60.73;MQ0=10;MQRankSum=-4.585;QD=20.56;ReadPosRankSum=-0.476;VQSLOD=3.9993;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:46:99:0,114,2551	0/1:11,0:11:28.75:270,0,29	0/0:34,0:22:41.24:0,41,742	0/0:25,0:20:8.08:0,8,271	0/0:8,1:25:3.31:0,3,61	0/0:11,0:18:9.40:0,9,76	1/1:4,0:18:2.66:50,3,0	1/1:37,0:36:92.84:1385,93,0	0/1:17,0:16:3.62:4,0,136	1/1:7,0:22:48.63:1084,49,0	1/1:24,0:24:32.89:496,33,0	0/0:15,0:15:23.19:0,23,217	0/1:12,0:12:99:117,0,132	0/1:22,0:21:99:155,0,215	0/1:24,0:24:23.98:444,0,24	0/1:19,0:19:99:380,0,131	1/1:3,18:25:11.77:642,12,0	1/1:13,0:13:19.31:368,19,0	0/1:5,0:14:51.76:52,0,166	0/1:17,0:16:68.36:68,0,238	0/0:15,0:15:20.66:0,21,236	0/0:13,0:13:3.21:0,3,35	0/1:7,0:21:0:1,0,0	0/0:19,0:18:25.42:0,25,270	0/1:5,15:27:24.03:29,0,24	1/1:10,0:26:72.72:1769,73,0	0/1:26,0:25:99:282,0,157	1/1:9,0:9:15.05:342,15,0
chr10	47485686	.	TCC	T	1375.39	PASS	AB=0.652;AC=25;AF=0.446;AN=56;BaseQRankSum=-1.734;DP=318;FS=2.455;HRun=11;HaplotypeScore=63.2739;InbreedingCoeff=0.6726;MQ=50.41;MQ0=3;MQRankSum=-2.641;QD=9.82;ReadPosRankSum=4.190;VQSLOD=0.9806;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:26.86:0,27,247	1/1:0,5:5:12.02:126,12,0	0/0:18,0:8:12.04:0,12,163	0/0:20,0:9:20.28:0,20,260	1/1:2,5:7:2.87:32,3,0	1/1:1,11:12:8.96:95,9,0	1/1:5,7:12:2.06:28,2,0	1/1:5,12:17:36.06:375,36,0	0/0:9,0:11:12.37:0,12,85	1/1:3,5:8:18.02:191,18,0	0/1:4,7:11:0.01:0,0,0	0/0:6,0:9:10.48:0,10,51	0/1:11,2:15:17.48:17,0,59	0/0:2,0:10:12.98:0,13,60	0/0:3,7:9:0:0,0,0	0/0:3,0:9:17.37:0,17,114	1/1:2,4:7:6.01:64,6,0	1/1:1,7:8:18.02:192,18,0	0/0:10,1:17:24.41:0,24,141	0/0:4,0:8:10.45:0,10,45	0/0:6,0:13:4.99:0,5,17	0/0:5,1:13:20.27:0,20,116	0/0:3,9:12:1.21:0,1,3	0/1:2,8:9:0.02:0,0,0	1/1:2,8:10:2.02:58,2,0	1/1:3,9:10:24.06:255,24,0	0/0:5,0:10:13.30:0,13,65	1/1:2,4:6:12.01:128,12,0
chr10	47485776	.	AAC	A	4734.77	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=7.562;DP=634;FS=6.817;HRun=0;HaplotypeScore=108.0043;InbreedingCoeff=0.9996;MQ=56.45;MQ0=8;MQRankSum=-3.744;QD=33.58;ReadPosRankSum=3.325;VQSLOD=7.2428;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:93.32:0,93,1627	0/0:10,0:10:30.10:0,30,522	0/0:38,0:35:93.30:0,93,1544	0/0:25,0:23:63.20:0,63,1042	1/1:1,16:17:42.13:568,42,0	0/0:20,0:20:57.20:0,57,998	0/0:27,0:27:54.17:0,54,917	0/0:40,0:40:99:0,102,1716	0/0:14,0:14:36.12:0,36,631	1/1:3,17:20:40.55:676,41,0	1/1:1,13:14:33.11:446,33,0	0/0:27,0:27:72.20:0,72,1224	0/0:23,0:23:60.20:0,60,1048	0/0:14,0:14:36.12:0,36,627	0/0:21,0:21:54.18:0,54,937	0/0:20,0:18:42.14:0,42,732	1/1:2,20:21:51.17:690,51,0	1/1:0,17:17:51.17:690,51,0	0/0:28,0:27:69.20:0,69,1104	0/0:13,0:13:39.13:0,39,679	0/0:43,0:41:99:0,111,1943	0/0:19,0:19:48.16:0,48,825	0/0:18,0:18:45.15:0,45,773	0/0:35,0:33:71.92:0,72,1235	1/1:0,13:13:33.11:446,33,0	1/1:3,23:26:52.19:855,52,0	0/0:17,0:17:48.16:0,48,840	1/1:1,10:11:27.09:365,27,0
chr10	47485907	.	C	CT	1414.25	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-8.140;DP=735;FS=4.998;HRun=1;HaplotypeScore=74.2846;InbreedingCoeff=0.9978;MQ=74.04;MQ0=0;MQRankSum=2.353;QD=39.28;ReadPosRankSum=-4.230;VQSLOD=2.3494;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,144,1846	0/0:8,0:8:24.08:0,24,311	0/0:28,0:28:69.01:0,69,805	0/0:33,0:32:55.84:0,56,995	0/0:13,0:13:39.08:0,39,487	0/0:23,0:23:66.18:0,66,823	0/0:28,0:28:84.26:0,84,1072	1/1:1,35:36:99:1509,105,0	0/0:29,0:29:75.23:0,75,954	0/0:20,0:20:60.19:0,60,775	0/0:26,0:26:65.97:0,66,834	0/0:34,0:34:99:0,102,1304	0/0:26,0:26:72.23:0,72,931	0/0:25,0:25:75.04:0,75,925	0/0:28,0:27:81.26:0,81,1050	0/0:25,0:25:72.23:0,72,933	0/0:30,0:30:88.50:0,89,1116	0/0:23,0:23:63.20:0,63,815	0/0:32,0:32:74.48:0,74,1090	0/0:20,0:20:57.17:0,57,723	0/0:34,0:34:99:0,102,1307	0/0:21,0:21:60.19:0,60,774	0/0:21,0:21:60.18:0,60,761	0/0:36,0:36:99:0,108,1387	0/0:20,0:20:57.17:0,57,724	0/0:36,0:35:99:0,102,1311	0/0:15,0:15:45.13:0,45,562	0/0:15,0:15:36.12:0,36,467
chr10	47486078	.	GAT	G	2854.89	PASS	AB=0.994;AC=15;AF=0.268;AN=56;BaseQRankSum=10.706;DP=658;FS=25.726;HRun=0;HaplotypeScore=112.5149;InbreedingCoeff=0.4084;MQ=60.50;MQ0=10;MQRankSum=4.807;QD=11.33;ReadPosRankSum=5.568;VQSLOD=1.4871;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:85.38:0,85,1336	1/1:0,13:13:32.99:455,33,0	0/1:22,0:10:4.38:4,0,109	0/0:31,0:13:25.39:0,25,270	0/0:23,0:24:60.53:0,61,919	1/1:0,20:24:53.95:771,54,0	1/1:2,29:31:40.55:840,41,0	0/0:40,0:40:24.08:0,24,328	0/1:21,0:21:29.90:30,0,43	0/0:23,0:22:63.97:0,64,982	0/0:21,0:21:46.82:0,47,855	0/1:23,0:24:2.13:2,0,115	0/1:20,0:20:28.46:28,0,94	0/0:36,0:35:81.84:0,82,705	1/1:3,29:32:37.88:783,38,0	0/1:25,0:25:26.46:26,0,48	0/0:23,0:23:63.09:0,63,1064	0/0:18,0:18:51.58:0,52,903	0/0:27,0:25:67.35:0,67,626	0/0:19,0:19:43.03:0,43,358	0/0:16,0:16:47.99:0,48,444	0/0:15,0:15:44.02:0,44,355	0/1:25,0:24:24.31:80,0,24	0/1:14,0:14:12.72:13,0,80	0/0:17,0:17:43.21:0,43,624	0/0:31,0:31:80.54:0,81,1231	0/0:17,0:17:41.90:0,42,381	0/0:19,0:18:48.82:0,49,769
chr10	47486079	.	ATT	A	4164.86	PASS	AB=0.795;AC=22;AF=0.393;AN=56;BaseQRankSum=7.673;DP=658;FS=1.521;HRun=14;HaplotypeScore=109.4183;InbreedingCoeff=0.7583;MQ=62.00;MQ0=10;MQRankSum=3.928;QD=12.89;ReadPosRankSum=3.513;VQSLOD=2.9019;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:75.21:0,75,987	1/1:13,0:13:26.81:208,27,0	0/1:23,0:11:0.50:1,0,30	0/0:30,0:13:20.48:0,20,142	0/0:20,0:21:49.28:0,49,594	1/1:24,0:24:37.86:332,38,0	1/1:31,0:31:5.52:336,6,0	1/1:10,26:37:76.74:719,77,0	1/1:3,16:21:38.81:408,39,0	0/0:16,1:21:27.87:0,28,625	0/0:17,1:21:28.28:0,28,599	0/1:6,17:24:4.98:317,0,5	1/1:4,13:20:38.35:376,38,0	0/1:12,1:33:1.27:1,0,126	0/1:34,0:32:5.60:299,0,6	1/1:2,20:23:56.79:512,57,0	0/0:20,0:23:59.14:0,59,725	0/0:18,0:18:48.10:0,48,627	0/0:11,0:25:51.84:0,52,270	0/0:6,1:20:6.12:0,6,99	0/0:2,0:17:43.43:0,43,196	0/0:3,0:15:18.80:0,19,94	1/1:2,21:24:18.55:455,19,0	1/1:3,8:14:26.18:202,26,0	0/0:15,1:17:10.68:0,11,376	0/0:30,2:33:16.64:0,17,783	0/0:6,0:17:25.47:0,25,120	0/0:21,1:21:23.38:0,23,620
chr10	47487782	.	G	GA	395.84	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-4.648;DP=576;FS=12.541;HRun=6;HaplotypeScore=54.1029;InbreedingCoeff=0.9980;MQ=94.20;MQ0=0;MQRankSum=-2.113;QD=23.28;ReadPosRankSum=1.538;VQSLOD=2.2855;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:89.21:0,89,885	0/0:11,0:11:30.07:0,30,305	0/0:27,0:27:52.83:0,53,591	0/0:24,0:24:66.15:0,66,672	0/0:28,0:28:78.17:0,78,796	0/0:20,0:20:51.11:0,51,520	0/0:23,0:23:60.11:0,60,604	0/0:34,0:34:81.17:0,81,822	0/0:22,0:22:60.14:0,60,612	0/0:27,0:27:69.15:0,69,704	0/0:18,0:18:48.10:0,48,489	0/0:19,0:19:54.11:0,54,544	0/0:16,0:16:39.08:0,39,398	0/0:25,0:25:69.15:0,69,704	0/0:20,0:20:60.12:0,60,606	1/1:2,15:17:39.12:491,39,0	0/0:25,0:25:72.16:0,72,735	0/0:15,0:15:45.10:0,45,459	0/0:16,0:16:36.05:0,36,359	0/0:17,0:17:45.10:0,45,459	0/0:13,0:13:39.07:0,39,390	0/0:14,0:14:39.08:0,39,397	0/0:15,0:15:45.10:0,45,459	0/0:22,0:22:66.13:0,66,665	0/0:20,0:20:57.12:0,57,576	0/0:23,0:23:57.12:0,57,582	0/0:24,0:24:69.16:0,69,704	0/0:9,0:9:27.06:0,27,275
chr10	47488606	.	GGTGTGTGTGTGTGT	G	522.10	PASS	AB=0.654;AC=3;AF=0.056;AN=54;BaseQRankSum=1.070;DP=572;FS=0.000;HRun=0;HaplotypeScore=267.1437;InbreedingCoeff=0.4026;MQ=63.72;MQ0=8;MQRankSum=-3.747;QD=13.39;ReadPosRankSum=-1.959;VQSLOD=1.9635;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:36.11:0,36,2035	0/1:8,3:17:56.45:429,0,56	0/0:23,0:16:26.76:0,27,933	0/0:20,0:18:36.10:0,36,1494	0/0:21,0:22:33.08:0,33,662	0/0:5,6:19:6.01:0,6,62	./.	0/0:17,0:30:54.03:0,54,839	0/0:21,0:22:24.08:0,24,738	0/0:28,0:28:66.18:0,66,1700	0/0:20,0:21:36.11:0,36,672	0/0:14,0:14:0.04:0,0,795	0/0:22,0:23:25.64:0,26,835	0/0:21,0:21:35.81:0,36,1403	1/1:8,5:22:8.44:189,8,0	0/0:29,0:29:18.06:0,18,778	0/0:14,0:15:33.06:0,33,875	0/0:16,0:16:42.10:0,42,1038	0/0:13,0:10:18.06:0,18,925	0/0:22,0:21:36.11:0,36,1603	0/0:16,0:15:5.83:0,6,290	0/0:23,0:23:30.09:0,30,1059	0/0:16,0:16:23.95:0,24,555	0/0:25,0:24:22.71:0,23,705	0/0:17,0:18:30.10:0,30,778	0/0:23,0:25:45.07:0,45,1103	0/0:18,0:17:10.11:0,10,1802	0/0:13,0:14:29.56:0,30,661
chr10	47488628	.	T	TGAGAGAGA	3009.21	PASS	AB=0.966;AC=25;AF=0.446;AN=56;BaseQRankSum=3.588;DP=520;FS=16.652;HRun=0;HaplotypeScore=185.3100;InbreedingCoeff=-0.2958;MQ=44.75;MQ0=9;MQRankSum=-3.568;QD=7.50;ReadPosRankSum=-3.339;VQSLOD=0.7266;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:39.11:0,39,1034	1/1:15,0:15:7.58:101,8,0	0/0:9,0:3:8.99:0,9,121	0/0:10,0:8:15.05:0,15,302	0/0:20,0:18:4.50:0,4,49	1/1:23,0:22:8.69:72,9,0	0/0:23,0:21:5.89:0,6,56	0/1:24,0:24:99:391,0,228	0/1:9,13:23:6.75:170,0,7	0/1:26,0:26:99:138,0,198	0/1:22,0:22:23.38:175,0,23	0/1:15,1:15:23.51:224,0,24	0/1:20,0:21:4.98:170,0,5	0/1:18,0:18:12.92:13,0,294	0/1:20,0:19:51.02:107,0,51	1/1:5,1:21:4.65:213,5,0	0/1:14,0:12:29.99:30,0,47	0/1:10,0:9:25.20:89,0,25	0/1:16,0:15:99:359,0,316	0/0:22,0:21:4.25:0,4,425	0/0:13,0:11:6.01:0,6,71	0/1:25,0:26:14.63:15,0,37	1/1:11,0:9:1.98:63,2,0	0/1:24,0:23:1.27:103,0,1	0/1:16,0:16:18.37:18,0,86	0/1:23,0:21:99:384,0,122	0/1:15,0:15:99:214,0,319	0/1:15,0:15:72.19:122,0,72
chr10	47488630	.	T	TGAGAGAGAGA	3929.28	PASS	AB=0.955;AC=30;AF=0.536;AN=56;BaseQRankSum=1.166;DP=518;FS=14.230;HRun=0;HaplotypeScore=197.3077;InbreedingCoeff=-0.2528;MQ=44.14;MQ0=9;MQRankSum=-2.590;QD=8.64;ReadPosRankSum=-3.266;VQSLOD=1.2095;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:36.11:0,36,868	1/1:16,0:16:20.37:183,20,0	0/1:7,0:3:0.82:1,0,24	0/0:7,0:5:14.96:0,15,141	0/1:19,0:17:10.49:10,0,19	1/1:24,0:23:8.89:97,9,0	0/0:23,0:21:4.93:0,5,44	0/1:26,0:26:82.65:423,0,83	0/1:23,0:22:2.30:173,0,2	0/1:24,0:24:87.92:179,0,88	0/1:21,0:21:14.76:125,0,15	0/1:16,0:15:10.99:178,0,11	0/1:7,13:23:12.30:199,0,12	1/1:17,0:17:14.31:157,14,0	0/1:20,0:19:46.40:154,0,46	0/1:18,0:18:2.31:156,0,2	0/1:14,0:12:21.30:21,0,36	0/1:10,0:9:4.67:92,0,5	0/1:8,6:16:69.67:505,0,70	0/1:23,0:21:41.25:61,0,41	0/0:12,0:10:0.47:0,0,1	0/1:27,0:27:1:29,0,1	1/1:11,0:9:0.20:17,0,0	1/1:29,0:28:6.59:170,7,0	0/1:16,0:16:13.39:13,0,41	0/1:24,0:22:74.79:448,0,75	0/1:14,0:14:17.82:374,0,18	1/1:15,0:15:11.01:162,11,0
chr10	47488642	.	A	AGAGAGAGA	4813.05	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-0.824;DP=640;FS=4.944;HRun=0;HaplotypeScore=213.9644;InbreedingCoeff=0.4542;MQ=44.39;MQ0=11;MQRankSum=-1.720;QD=7.98;ReadPosRankSum=-1.230;VQSLOD=3.4851;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:17.69:0,18,422	1/1:18,0:18:14.35:171,14,0	0/0:6,0:1:0:0,0,0	0/0:11,0:6:3.01:0,3,57	1/1:35,0:33:1.47:4,1,0	1/1:29,0:28:8.73:105,9,0	1/1:21,0:19:9.48:98,9,0	1/1:40,0:39:8.33:35,8,0	1/1:27,0:26:9.01:252,9,0	1/1:31,0:31:41.63:615,42,0	1/1:20,0:20:16.67:193,17,0	1/1:13,7:20:8.05:170,8,0	1/1:24,0:24:16.44:250,16,0	1/1:16,0:16:3.01:78,3,0	1/1:32,0:31:6.51:232,7,0	1/1:21,0:21:10.32:250,10,0	1/1:17,0:16:1.32:121,1,0	1/1:10,0:9:12.14:241,12,0	1/1:17,0:16:16.87:479,17,0	1/1:28,0:26:6.02:139,6,0	1/1:24,0:22:0.94:2,1,0	1/1:32,0:32:5.10:56,5,0	1/1:17,0:14:1.82:5,2,0	1/1:30,0:29:15.79:294,16,0	1/1:26,0:26:5.77:34,6,0	1/1:33,0:31:25.24:509,25,0	1/1:21,0:20:12.93:333,13,0	1/1:12,0:11:8.52:146,9,0
chr10	47488694	.	A	AGT	9452.20	PASS	AB=0.522;AC=15;AF=0.268;AN=56;BaseQRankSum=-12.774;DP=800;FS=4.121;HRun=0;HaplotypeScore=141.6085;InbreedingCoeff=0.9545;MQ=61.98;MQ0=1;MQRankSum=-1.724;QD=45.23;ReadPosRankSum=3.838;VQSLOD=5.8399;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:17:42.99:0,43,596	0/0:14,0:14:42.10:0,42,557	0/0:34,0:30:75.18:0,75,974	0/0:45,0:43:99:0,110,1399	1/1:3,30:34:87.26:1524,87,0	0/0:26,0:26:72.20:0,72,966	0/0:25,0:25:72.24:0,72,988	0/0:48,0:48:99:0,129,1727	0/0:24,0:24:63.21:0,63,865	1/1:2,31:33:96.33:1703,96,0	1/1:2,26:28:78.23:1355,78,0	0/0:35,0:35:90.27:0,90,1203	0/0:34,0:34:90.30:0,90,1234	0/0:25,0:25:68.68:0,69,894	0/0:29,0:29:78.20:0,78,1034	0/0:39,0:39:99:0,108,1481	1/1:2,20:23:54.18:949,54,0	0/1:1,11:12:0.16:498,0,0	0/0:24,0:24:66.16:0,66,830	0/0:24,0:24:66.18:0,66,884	0/0:40,0:40:99:0,99,1338	0/0:26,0:26:78.25:0,78,1055	0/0:17,0:17:45.15:0,45,616	0/0:36,0:36:84.11:0,84,1093	1/1:4,22:27:57.19:1003,57,0	1/1:3,31:35:93.32:1650,93,0	0/0:28,0:28:75.23:0,75,1005	1/1:2,15:17:45.15:770,45,0
chr10	47488777	.	ATG	A	8330.08	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=13.436;DP=956;FS=2.241;HRun=0;HaplotypeScore=195.1857;InbreedingCoeff=0.9999;MQ=60.47;MQ0=3;MQRankSum=-1.054;QD=24.65;ReadPosRankSum=2.706;VQSLOD=5.3482;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,117,1933	1/1:5,0:14:33.78:172,34,0	0/0:32,0:26:36.30:0,36,743	0/0:40,0:36:42.42:0,42,993	1/1:4,18:22:57.17:721,57,0	1/1:4,0:34:73.86:364,74,0	1/1:3,0:32:71.90:352,72,0	0/0:53,0:53:99:0,114,1905	0/0:38,0:38:99:0,105,1771	1/1:7,37:44:99:1560,120,0	1/1:4,21:25:60.18:762,60,0	0/0:38,0:38:88.54:0,89,1474	0/0:35,0:35:87.25:0,87,1432	0/0:30,0:30:54.18:0,54,914	1/1:2,0:43:99:532,108,0	0/0:47,0:47:99:0,123,2080	1/1:9,13:20:39.11:490,39,0	1/1:3,16:18:54.12:667,54,0	0/0:27,0:27:66.23:0,66,1121	0/0:37,0:37:90.25:0,90,1409	0/0:66,0:66:99:0,181,2917	0/0:40,0:40:99:0,111,1800	0/0:21,0:21:47.99:0,48,815	0/0:45,0:45:99:0,102,1694	1/1:5,14:19:51.15:646,51,0	1/1:13,30:42:96.31:1245,96,0	0/0:24,0:24:63.22:0,63,1069	1/1:0,21:21:63.20:818,63,0
chr10	47488819	.	T	TGA	8751.86	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-7.494;DP=1054;FS=0.625;HRun=0;HaplotypeScore=265.2154;InbreedingCoeff=1.0000;MQ=63.85;MQ0=6;MQRankSum=-2.651;QD=36.31;ReadPosRankSum=-0.895;VQSLOD=3.8606;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,99,1267	0/0:17,0:17:45.13:0,45,572	0/0:47,0:32:47.83:0,48,600	0/0:61,0:46:68.10:0,68,885	1/1:7,22:29:66.20:1025,66,0	0/0:35,0:35:60.17:0,60,757	0/0:33,0:32:80.98:0,81,914	0/0:51,0:51:99:0,132,1619	0/0:43,0:43:99:0,105,1384	1/1:23,28:50:99:1951,120,0	1/1:11,18:29:66.08:923,66,0	0/0:48,0:48:99:0,120,1448	0/0:34,0:34:90.17:0,90,1105	0/0:34,0:34:69.18:0,69,859	0/0:50,0:50:99:0,108,1344	0/0:45,0:45:99:0,102,1305	1/1:5,15:20:45.14:740,45,0	1/1:9,10:19:41.64:660,42,0	0/0:29,0:28:75.18:0,75,935	0/0:30,0:30:72.17:0,72,935	0/0:76,0:76:99:0,181,2347	0/0:40,0:40:96.11:0,96,1240	0/0:29,0:28:59.81:0,60,724	0/0:46,0:46:99:0,105,1321	1/1:10,15:24:60.18:912,60,0	1/1:16,20:35:87.06:1328,87,0	0/0:26,0:26:69.21:0,69,918	1/1:12,19:31:74.83:1212,75,0
chr10	47488841	.	TGAGA	T	18403.21	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-2.179;DP=991;FS=3.939;HRun=0;HaplotypeScore=244.2690;InbreedingCoeff=1.0000;MQ=58.68;MQ0=6;MQRankSum=2.631;QD=36.88;ReadPosRankSum=4.762;VQSLOD=4.9357;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:41:98.68:0,99,2263	0/0:14,0:15:35.91:0,36,805	0/0:40,0:24:42.25:0,42,782	0/0:44,0:26:54.58:0,55,902	0/0:27,0:26:54.18:0,54,1335	0/0:30,0:30:63.22:0,63,1557	0/0:39,0:38:69.24:0,69,1552	1/1:27,20:47:99:1915,114,0	1/1:16,27:43:93.32:1631,93,0	0/0:49,0:48:99:0,114,2553	0/0:29,0:29:63.22:0,63,1496	1/1:8,40:48:99:1898,108,0	1/1:6,23:29:68.60:1217,69,0	1/1:2,31:33:66.23:1144,66,0	0/0:57,0:57:99:0,123,2784	1/1:13,34:47:99:1756,102,0	0/0:18,0:18:48.16:0,48,1154	0/0:21,0:21:51.65:0,52,1157	1/1:15,10:22:54.18:909,54,0	1/1:12,16:28:56.87:990,57,0	1/1:22,49:70:99:2549,146,0	1/1:4,27:31:80.93:1399,81,0	1/1:7,18:24:44.94:752,45,0	1/1:18,23:41:72.23:1244,72,0	0/0:24,0:23:57.20:0,57,1412	0/0:31,0:30:75.26:0,75,1770	1/1:13,18:31:57.20:1000,57,0	0/0:27,0:27:59.75:0,60,1507
chr10	47488918	.	ATG	A	18004.62	PASS	AB=0.981;AC=27;AF=0.482;AN=56;BaseQRankSum=12.375;DP=1163;FS=0.752;HRun=0;HaplotypeScore=240.1450;InbreedingCoeff=0.9538;MQ=59.51;MQ0=4;MQRankSum=1.191;QD=28.35;ReadPosRankSum=3.501;VQSLOD=5.3283;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,141,2425	0/0:14,0:14:13.59:0,14,93	0/1:51,1:23:1.83:2,0,645	0/0:46,0:28:49.68:0,50,632	0/0:34,0:34:69.24:0,69,1225	0/0:34,0:34:74:0,74,412	0/0:53,0:53:99:0,116,869	1/1:10,39:46:99:1596,105,0	1/1:3,43:46:99:1382,99,0	0/0:59,0:59:99:0,171,2884	0/0:26,0:26:69.12:0,69,1142	1/1:8,43:51:99:1723,129,0	1/1:7,36:43:99:1492,108,0	1/1:8,28:36:81.27:1125,81,0	0/0:58,0:58:99:0,141,936	1/1:5,47:52:99:1591,114,0	0/0:33,0:32:83.50:0,83,1452	0/0:33,0:32:90.20:0,90,1505	1/1:7,26:32:81.27:1109,81,0	1/1:2,28:30:69.16:919,69,0	1/1:8,75:83:99:2305,130,0	1/1:5,36:41:99:1346,99,0	1/1:4,30:34:69.20:967,69,0	1/1:3,49:52:99:1490,108,0	0/0:26,0:26:72.24:0,72,1237	0/0:45,0:45:99:0,129,2276	1/1:1,32:33:69.23:958,69,0	0/0:15,0:15:42.11:0,42,697
chr10	47488925	.	AGT	A	4891.43	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-3.302;DP=1152;FS=5.217;HRun=0;HaplotypeScore=282.6350;InbreedingCoeff=0.9994;MQ=60.47;MQ0=2;MQRankSum=-1.261;QD=31.56;ReadPosRankSum=-0.225;VQSLOD=4.1418;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:51,1:52:99:0,103,2146	1/1:2,11:13:39.10:471,39,0	0/0:50,1:25:52.27:0,52,633	0/0:51,0:28:25.91:0,26,553	0/0:33,0:33:72.25:0,72,1200	1/1:9,26:35:99:1213,99,0	1/1:27,27:54:99:1593,132,0	0/0:52,0:49:90.85:0,91,642	0/0:46,0:46:76.62:0,77,321	0/0:55,0:55:99:0,144,2361	0/0:23,0:23:48.04:0,48,750	0/0:47,0:47:64.46:0,64,358	0/0:41,0:41:40.06:0,40,304	0/0:36,0:36:40.87:0,41,225	1/1:16,37:53:99:1615,129,0	0/0:49,0:49:97.45:0,97,418	0/0:33,1:33:90.28:0,90,1437	0/0:35,1:35:65.24:0,65,1349	0/0:32,0:32:36.47:0,36,396	0/0:30,0:30:55.25:0,55,245	0/0:83,0:83:70.88:0,71,481	0/0:42,0:42:46.51:0,47,345	0/0:33,0:33:42.26:0,42,224	0/0:53,0:53:77.13:0,77,361	0/0:23,0:23:57.15:0,57,878	0/0:46,0:46:99:0,129,2067	0/0:33,0:33:49.75:0,50,200	0/0:16,0:16:30.10:0,30,492
chr10	47489021	.	ATG	A	4125.78	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-1.197;DP=1022;FS=11.581;HRun=0;HaplotypeScore=188.0615;InbreedingCoeff=0.9998;MQ=62.34;MQ0=5;MQRankSum=1.452;QD=30.56;ReadPosRankSum=0.975;VQSLOD=4.2820;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,1:42:89.91:0,90,1550	1/1:2,13:15:39.13:501,39,0	0/0:41,0:28:44.24:0,44,744	0/0:43,1:33:32.40:0,32,777	0/0:28,0:28:75.26:0,75,1259	1/1:9,18:27:50.36:730,50,0	1/1:4,36:40:84.27:1081,84,0	0/0:37,0:37:78.11:0,78,1440	0/0:38,0:38:99:0,102,1706	0/0:43,0:43:99:0,114,1893	0/0:27,0:27:66.20:0,66,1051	0/0:53,0:53:99:0,138,2300	0/0:43,0:43:99:0,108,1799	0/0:23,0:23:60.21:0,60,1001	1/1:10,43:52:99:1813,141,0	0/0:33,0:33:84.27:0,84,1387	0/0:41,0:40:99:0,101,1734	0/0:32,0:32:84.29:0,84,1381	0/0:15,0:14:33.11:0,33,526	0/0:31,0:30:81.75:0,82,1364	0/0:99,1:100:99:0,271,4477	0/0:42,0:42:74.98:0,75,1767	0/0:23,0:23:63.11:0,63,915	0/0:45,0:45:99:0,117,1954	0/0:19,0:19:51.16:0,51,824	0/0:28,0:28:72.24:0,72,1174	0/0:29,0:29:78.25:0,78,1286	0/0:29,0:29:81.22:0,81,1299
chr10	47492396	.	T	TA	7033.49	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-13.029;DP=598;FS=4.349;HRun=9;HaplotypeScore=56.7025;InbreedingCoeff=0.9883;MQ=71.41;MQ0=0;MQRankSum=0.479;QD=25.48;ReadPosRankSum=-0.918;VQSLOD=5.2752;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:62.82:0,63,531	0/0:6,0:6:18:0,18,156	0/0:15,0:15:18.39:0,18,175	0/0:8,0:8:8.98:0,9,78	0/0:35,0:35:95.95:0,96,827	0/0:22,0:21:53.96:0,54,464	0/0:13,0:13:35.96:0,36,308	1/1:7,33:40:99:1051,99,0	1/1:1,20:21:31.11:564,31,0	0/0:30,0:30:71.94:0,72,619	0/0:22,0:22:53.96:0,54,465	1/1:1,9:10:24.95:267,25,0	1/1:8,19:27:28.11:526,28,0	1/1:2,18:20:51.14:564,51,0	0/0:23,0:23:62.97:0,63,543	1/1:4,15:19:19.07:439,19,0	0/0:27,0:27:74.94:0,75,641	0/0:24,0:24:62.91:0,63,534	1/1:4,13:17:39.11:431,39,0	1/1:2,18:20:54.07:571,54,0	1/1:1,12:13:30.01:311,30,0	1/1:2,19:21:28.09:538,28,0	1/1:1,20:21:54.15:597,54,0	1/1:2,24:26:66.18:729,66,0	0/0:27,0:27:77.98:0,78,677	0/0:30,0:30:83.97:0,84,729	1/1:5,15:21:41.74:445,42,0	0/0:15,0:15:32.97:0,33,281
chr10	47494423	.	A	AG	2590.73	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-9.403;DP=727;FS=4.176;HRun=6;HaplotypeScore=67.5224;InbreedingCoeff=0.9977;MQ=58.33;MQ0=7;MQRankSum=1.008;QD=29.11;ReadPosRankSum=0.156;VQSLOD=4.2881;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:96.22:0,96,979	1/1:1,10:11:24.08:302,24,0	0/0:15,0:7:21.05:0,21,214	0/0:20,0:9:23.91:0,24,222	0/0:32,0:32:75.15:0,75,765	1/1:2,15:17:45.14:565,45,0	1/1:5,30:35:78.25:980,78,0	0/0:26,0:25:69.15:0,69,704	0/0:29,0:29:81.13:0,81,799	0/0:32,0:32:75.15:0,75,761	0/0:16,0:16:48.11:0,48,489	0/0:34,0:34:99:0,102,1040	0/0:23,0:23:69.15:0,69,699	0/0:32,0:32:81.17:0,81,826	1/1:0,26:25:72.23:903,72,0	0/0:25,0:25:63.09:0,63,619	0/0:33,0:33:87.18:0,87,881	0/0:26,0:26:72.12:0,72,723	0/0:29,0:22:51.08:0,51,506	0/0:31,0:31:69.14:0,69,698	0/0:52,0:52:99:0,150,1501	0/0:17,0:17:48.10:0,48,485	0/0:19,0:18:48.11:0,48,490	0/0:26,0:26:69.10:0,69,686	0/0:18,0:18:45.08:0,45,452	0/0:23,0:23:60.11:0,60,602	0/0:29,0:29:84.16:0,84,843	0/0:18,0:18:42.54:0,43,421
chr10	47496869	.	A	ATCCG	12388.39	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-14.855;DP=586;FS=0.729;HRun=0;HaplotypeScore=99.1784;InbreedingCoeff=0.9833;MQ=92.32;MQ0=0;MQRankSum=-4.389;QD=52.49;ReadPosRankSum=4.655;VQSLOD=5.4960;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,117,2138	1/1:0,10:11:26.96:710,27,0	0/0:24,0:24:60.17:0,60,1040	0/0:26,0:26:66.47:0,66,1097	1/1:3,12:17:17.77:415,18,0	1/1:3,22:25:57.20:1500,57,0	1/1:4,21:27:54.17:1390,54,0	0/0:30,0:30:66.23:0,66,1208	0/0:26,0:26:72.23:0,72,1284	1/1:4,18:22:54.17:1362,54,0	1/1:3,4:7:6.02:157,6,0	0/0:18,0:18:51.13:0,51,846	0/0:11,0:11:33.11:0,33,607	0/0:18,0:18:48.13:0,48,821	1/1:2,19:22:48.16:1264,48,0	0/0:19,0:19:54.16:0,54,932	1/1:6,31:36:72.24:1815,72,0	1/1:6,23:29:48.16:1265,48,0	0/0:19,0:19:51.16:0,51,881	0/0:12,0:12:33.10:0,33,575	0/0:39,0:39:99:0,102,1745	0/0:15,0:15:39.09:0,39,653	0/0:12,0:12:30.10:0,30,545	0/0:24,0:24:63.22:0,63,1159	1/1:1,12:13:33.11:869,33,0	1/1:4,15:19:48.11:1093,48,0	0/0:16,0:16:45.15:0,45,828	1/1:0,7:7:21.07:550,21,0
chr10	47497539	.	CA	C	2524.31	PASS	AB=0.841;AC=23;AF=0.411;AN=56;BaseQRankSum=1.985;DP=590;FS=1.942;HRun=13;HaplotypeScore=81.3508;InbreedingCoeff=0.4622;MQ=60.09;MQ0=4;MQRankSum=2.261;QD=8.64;ReadPosRankSum=2.935;VQSLOD=3.2002;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,1:27:47.18:0,47,612	0/0:7,0:7:11.24:0,11,56	0/0:20,0:6:2.89:0,3,22	0/0:14,0:4:2.50:0,2,9	0/1:22,2:23:20.26:20,0,111	0/0:29,0:29:20.28:0,20,144	0/0:20,1:22:3.90:0,4,112	0/1:22,0:22:15.15:25,0,15	0/1:7,7:14:5.94:116,0,6	0/0:31,0:32:21.45:0,21,206	0/0:20,0:20:4.36:0,4,32	1/1:9,18:27:6.35:305,6,0	1/1:7,11:18:15.30:267,15,0	1/1:7,12:19:12.63:254,13,0	0/0:18,0:18:14.20:0,14,70	0/0:18,0:19:29.01:0,29,424	0/0:21,0:21:11.82:0,12,138	0/1:24,0:24:10.28:10,0,75	1/1:5,12:15:8.69:175,9,0	1/1:6,15:22:25.97:273,26,0	1/1:5,13:19:22.66:269,23,0	1/1:13,20:32:15.15:426,15,0	1/1:6,10:16:0.03:152,0,0	0/1:9,9:19:20.24:187,0,20	0/0:22,0:22:6.24:0,6,84	0/0:28,1:29:10.41:0,10,253	1/1:5,11:17:34.22:233,34,0	0/0:17,0:16:8.99:0,9,87
chr10	47497547	.	A	AG	633.34	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-0.446;DP=625;FS=3.388;HRun=0;HaplotypeScore=94.9057;InbreedingCoeff=0.9091;MQ=59.90;MQ0=7;MQRankSum=-2.650;QD=18.63;ReadPosRankSum=-1.909;VQSLOD=5.2802;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:78.16:0,78,995	0/0:8,0:8:11.64:0,12,112	0/0:20,0:6:11.05:0,11,80	0/0:18,0:7:14.72:0,15,129	0/0:24,0:23:63.03:0,63,691	0/0:31,0:31:35.09:0,35,257	0/0:24,0:23:25.61:0,26,183	1/1:6,28:30:78.28:728,78,0	0/0:14,0:14:35.90:0,36,302	0/0:30,0:30:72:0,72,869	0/0:19,0:19:39.35:0,39,385	0/0:25,0:25:63.20:0,63,488	0/0:20,0:20:56.77:0,57,450	0/0:21,0:21:42.83:0,43,412	0/0:20,0:20:17.38:0,17,102	0/0:21,0:21:60.13:0,60,743	0/0:25,0:25:72.05:0,72,755	0/0:25,0:25:60.13:0,60,693	0/0:19,0:17:44.83:0,45,350	0/0:22,0:22:60.90:0,61,445	0/0:21,0:21:59.73:0,60,453	0/0:35,0:34:98.18:0,98,758	0/0:16,0:16:41.85:0,42,343	0/0:19,0:19:50.76:0,51,418	0/0:20,0:20:45.10:0,45,543	0/0:30,0:30:78.07:0,78,868	0/0:16,0:16:41.78:0,42,316	0/0:21,0:20:36.09:0,36,434
chr10	47497550	.	AAAG	A	3218.01	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-3.304;DP=625;FS=3.774;HRun=0;HaplotypeScore=102.2335;InbreedingCoeff=0.9427;MQ=59.26;MQ0=7;MQRankSum=2.591;QD=16.67;ReadPosRankSum=-0.337;VQSLOD=2.9161;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:63.18:0,63,1095	0/0:2,0:7:15.04:0,15,182	0/0:18,0:5:0.47:0,0,1	0/0:15,0:6:9.02:0,9,111	1/1:11,12:22:41.72:455,42,0	0/0:4,0:31:34.30:0,34,425	0/0:8,0:24:18.49:0,18,211	0/0:36,0:31:57.76:0,58,476	0/0:13,0:13:26.90:0,27,248	1/1:12,16:28:56.75:601,57,0	1/1:9,10:19:35.25:318,35,0	0/0:25,0:26:15.60:0,16,318	0/0:18,0:18:38.99:0,39,377	0/0:24,0:24:44.96:0,45,434	0/0:0,0:22:15.05:0,15,195	0/0:22,0:22:36.04:0,36,693	1/1:16,7:23:43.62:467,44,0	1/1:9,16:25:44.48:532,44,0	0/0:20,0:18:33.01:0,33,304	0/0:22,0:22:41.44:0,41,359	0/0:22,0:22:44.53:0,45,415	0/0:34,0:33:59.47:0,59,569	0/0:15,0:15:20.31:0,20,263	0/0:19,0:19:33.25:0,33,405	1/1:5,14:20:29.77:373,30,0	1/1:16,14:30:38.64:395,39,0	0/0:16,0:16:8.59:0,9,256	1/1:7,18:24:21.07:281,21,0
chr10	47497551	.	AAG	A	1703.61	PASS	AB=0.970;AC=10;AF=0.179;AN=56;BaseQRankSum=4.767;DP=596;FS=3.448;HRun=0;HaplotypeScore=94.1615;InbreedingCoeff=0.0389;MQ=58.49;MQ0=7;MQRankSum=1.889;QD=9.01;ReadPosRankSum=0.223;VQSLOD=3.3485;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:71.86:0,72,982	0/1:7,0:7:9.77:10,0,110	0/0:16,0:4:1.08:0,1,17	0/0:15,0:6:14.82:0,15,133	0/1:21,1:21:17.97:222,0,18	0/0:29,0:29:14.55:0,15,241	0/0:22,0:20:20.87:0,21,160	0/0:36,0:31:34.24:0,34,341	0/0:12,0:12:26.14:0,26,177	0/1:27,0:27:17.07:332,0,17	1/1:14,2:16:17.83:224,18,0	0/0:25,0:25:21.84:0,22,222	0/0:18,0:18:45.08:0,45,262	0/0:22,0:22:53.28:0,53,362	0/0:16,0:16:14.95:0,15,117	0/0:22,0:22:49.69:0,50,665	0/1:21,0:21:9.59:268,0,10	0/1:22,3:25:12.21:279,0,12	0/0:20,0:18:37.66:0,38,242	0/0:22,0:22:44.54:0,45,267	0/0:22,0:22:45.59:0,46,288	0/0:34,0:33:68.99:0,69,454	0/0:15,0:15:36.47:0,36,219	0/0:20,0:20:54.15:0,54,378	0/1:18,1:19:21.15:181,0,21	0/1:29,0:29:99:226,0,122	0/0:15,0:15:12.12:0,12,158	0/1:22,1:22:31.89:109,0,32
chr10	47498631	.	ATGGGCGGG	A	588.44	PASS	AB=0.944;AC=8;AF=0.143;AN=56;BaseQRankSum=6.607;DP=568;FS=33.121;HRun=0;HaplotypeScore=153.3343;InbreedingCoeff=-0.1628;MQ=74.52;MQ0=5;MQRankSum=-5.100;QD=4.30;ReadPosRankSum=-3.235;VQSLOD=0.2747;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:87.30:0,87,3672	0/1:15,0:15:13.71:14,0,1462	0/0:32,0:25:37.79:0,38,2675	0/0:40,0:29:83.35:0,83,2952	0/0:18,0:17:7.73:0,8,1227	0/1:18,0:17:45.69:46,0,1402	0/1:12,0:12:44.34:44,0,1274	0/0:23,0:23:67.78:0,68,2765	0/0:12,0:12:36.11:0,36,1472	0/0:20,0:19:23.44:0,23,2094	0/1:14,0:14:4.81:5,0,936	0/0:28,0:28:84.29:0,84,3604	0/0:21,0:21:63.22:0,63,2882	0/0:19,0:19:57.20:0,57,2610	0/1:20,0:20:28.70:29,0,1707	0/0:16,0:16:48.16:0,48,2131	0/0:14,0:14:19.58:0,20,1453	0/0:11,3:14:33.07:0,33,1269	0/0:18,0:18:54.19:0,54,2267	0/0:26,0:26:72.25:0,72,3288	0/0:18,0:18:54.17:0,54,2271	0/0:24,0:24:72.25:0,72,3167	0/0:25,0:25:69.24:0,69,2985	0/0:20,0:20:60.21:0,60,2696	0/1:27,0:27:15.01:15,0,2132	0/1:11,5:16:99:371,0,1050	0/0:13,0:13:39.13:0,39,1774	0/1:11,4:15:99:196,0,1096
chr10	47498639	.	G	GCACACACACACACACA	5868.79	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=1.553;DP=608;FS=10.881;HRun=0;HaplotypeScore=232.9146;InbreedingCoeff=0.8912;MQ=59.77;MQ0=5;MQRankSum=-9.516;QD=25.19;ReadPosRankSum=-5.248;VQSLOD=1.4706;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:30:63.21:0,63,2629	1/1:11,0:14:5.58:337,6,0	0/0:37,0:23:19.46:0,19,645	0/0:35,0:24:20.01:0,20,492	1/1:10,4:20:3.01:228,3,0	1/1:12,0:22:12.04:622,12,0	1/1:11,0:19:9.03:261,9,0	0/0:22,0:24:35.75:0,36,1259	0/0:12,0:14:33.11:0,33,1243	1/1:14,0:23:15.04:660,15,0	1/1:12,0:22:2.80:208,3,0	0/0:23,0:26:66.23:0,66,2673	0/0:21,0:22:42.14:0,42,1757	0/0:20,0:20:42.14:0,42,1776	1/1:10,1:18:18.06:1070,18,0	0/0:15,0:17:36.11:0,36,1375	1/1:14,0:19:12.04:413,12,0	1/1:14,0:14:12.04:659,12,0	0/0:16,0:16:27.09:0,27,1143	0/0:26,0:28:69.20:0,69,2554	0/0:15,0:17:42.14:0,42,1733	0/0:23,0:23:51.17:0,51,2098	0/0:23,0:25:57.18:0,57,2202	0/0:20,0:24:63.22:0,63,2424	1/1:24,0:32:6.02:288,6,0	1/1:14,0:14:24.08:753,24,0	0/0:13,0:14:27.07:0,27,912	1/1:12,0:12:20.99:368,21,0
chr10	47499955	.	G	GCTAT	20015.54	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-16.425;DP=789;FS=2.338;HRun=0;HaplotypeScore=117.1847;InbreedingCoeff=0.9992;MQ=92.19;MQ0=0;MQRankSum=-5.472;QD=68.08;ReadPosRankSum=4.283;VQSLOD=7.3231;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,120,2242	1/1:0,10:10:24.08:648,24,0	0/0:34,0:34:96.29:0,96,1663	0/0:34,0:34:97.76:0,98,1658	1/1:1,15:17:30.10:802,30,0	1/1:2,27:29:69.24:1861,69,0	1/1:1,33:37:93.32:2506,93,0	0/0:25,0:25:63.22:0,63,1162	0/0:27,0:27:78.25:0,78,1438	1/1:1,36:38:99:2935,111,0	1/1:3,13:16:36.12:967,36,0	0/0:34,0:34:99:0,102,1903	0/0:37,0:37:99:0,105,1951	0/0:27,0:27:81.26:0,81,1477	1/1:0,42:45:99:3316,123,0	0/0:32,0:32:96.33:0,96,1804	1/1:0,21:21:48.16:1295,48,0	1/1:1,23:25:63.22:1694,63,0	0/0:25,0:25:72.23:0,72,1321	0/0:22,0:22:66.23:0,66,1235	0/0:45,0:45:99:0,132,2456	0/0:20,0:20:51.17:0,51,960	0/0:13,0:13:27.08:0,27,480	0/0:43,0:43:99:0,129,2430	1/1:1,11:12:24.08:647,24,0	1/1:7,25:33:96.31:2455,96,0	0/0:37,0:37:99:0,108,1975	1/1:0,11:11:33.11:890,33,0
chr10	47502930	.	G	GT	5297.58	PASS	AB=0.526;AC=15;AF=0.268;AN=56;BaseQRankSum=-11.636;DP=553;FS=36.629;HRun=2;HaplotypeScore=52.9290;InbreedingCoeff=0.9182;MQ=88.69;MQ0=0;MQRankSum=-1.936;QD=38.39;ReadPosRankSum=3.446;VQSLOD=2.4019;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,105,1258	0/0:4,0:4:12.02:0,12,134	0/0:22,0:22:60.08:0,60,709	0/0:18,0:18:37.32:0,37,506	1/1:0,18:18:54.02:703,54,0	0/0:17,0:17:48.11:0,48,567	0/0:21,0:21:63.20:0,63,781	0/0:22,0:22:63.06:0,63,726	0/0:19,0:19:57.18:0,57,706	1/1:0,18:18:54.16:759,54,0	1/1:0,11:11:21.54:303,22,0	0/0:32,0:32:90.23:0,90,1065	0/0:18,0:18:54.10:0,54,649	0/0:19,0:19:54.16:0,54,656	0/0:24,0:24:60.18:0,60,733	0/0:20,0:20:57.16:0,57,683	1/1:1,29:30:78.26:1123,78,0	1/1:0,23:23:63.21:903,63,0	0/0:20,0:20:60.16:0,60,712	0/0:12,0:12:36.10:0,36,423	0/0:41,0:41:99:0,123,1487	0/0:14,0:14:41.45:0,41,454	0/0:12,0:12:36.11:0,36,446	0/0:19,0:19:57.16:0,57,693	1/1:0,9:9:27.09:389,27,0	0/1:1,9:10:7.11:340,0,7	0/0:24,0:24:72.15:0,72,850	1/1:0,19:19:54.18:777,54,0
chr10	47503508	.	C	CAA	1537.62	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=0.345;DP=515;FS=11.490;HRun=8;HaplotypeScore=113.0602;InbreedingCoeff=0.6731;MQ=62.86;MQ0=6;MQRankSum=-5.528;QD=15.53;ReadPosRankSum=-2.112;VQSLOD=0.2521;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:81.17:0,81,881	1/1:3,6:9:20.86:271,21,0	0/0:10,0:7:15.02:0,15,122	0/1:9,0:6:1.03:1,0,43	0/0:21,0:21:54:0,54,545	1/1:4,14:19:50.14:643,50,0	1/1:5,7:12:27.72:361,28,0	0/0:21,0:19:45.11:0,45,501	0/0:25,0:25:29.50:0,30,509	0/0:24,0:23:57.11:0,57,616	0/0:13,0:13:36.09:0,36,398	0/0:17,0:17:28.12:0,28,413	0/0:25,0:25:47.16:0,47,698	0/1:15,0:15:6.46:6,0,356	1/1:4,8:12:30.75:410,31,0	0/0:23,0:23:32.69:0,33,592	0/0:26,0:26:44.63:0,45,504	0/0:27,0:27:66.08:0,66,696	0/0:28,0:28:55.27:0,55,692	0/1:22,0:22:9.14:9,0,411	0/0:7,0:7:6.80:0,7,156	0/0:12,0:12:10.77:0,11,287	0/0:13,0:13:24.13:0,24,356	0/0:16,0:16:34.16:0,34,395	0/0:10,0:10:23.78:0,24,233	0/0:20,0:20:38.97:0,39,383	0/0:41,0:40:4.26:0,4,852	0/0:8,0:7:18.03:0,18,186
chr10	47503672	.	T	TAGG	13928.09	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-14.180;DP=646;FS=1.370;HRun=0;HaplotypeScore=82.6547;InbreedingCoeff=0.9992;MQ=85.20;MQ0=0;MQRankSum=-3.252;QD=58.28;ReadPosRankSum=-0.223;VQSLOD=6.4061;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:89.05:0,89,1451	1/1:0,7:7:21.07:484,21,0	0/0:26,0:26:66.22:0,66,1075	0/0:20,0:20:54.05:0,54,879	1/1:2,24:26:69.24:1589,69,0	1/1:0,18:18:54.19:1244,54,0	1/1:3,17:21:39.13:865,39,0	0/0:27,0:27:72.22:0,72,1155	0/0:22,0:22:63.20:0,63,1048	1/1:4,31:37:99:2140,99,0	1/1:5,13:18:42.14:897,42,0	0/0:24,0:24:72.21:0,72,1193	0/0:33,0:33:96.33:0,96,1637	0/0:26,0:26:75.23:0,75,1225	1/1:1,15:16:42.14:968,42,0	0/0:30,0:29:78.26:0,78,1305	1/1:2,20:22:60.20:1345,60,0	1/1:2,18:20:45.15:1037,45,0	0/0:21,0:21:63.22:0,63,1068	0/0:20,0:20:57.19:0,57,965	0/0:41,0:41:99:0,120,1957	0/0:18,0:18:48.10:0,48,785	0/0:14,0:14:36.12:0,36,607	0/0:24,0:24:69.22:0,69,1150	1/1:1,13:14:36.12:795,36,0	1/1:1,27:29:87.28:1941,87,0	0/0:29,0:29:84.24:0,84,1388	1/1:1,9:10:27.09:623,27,0
chr10	47503941	.	CT	C	5038.21	PASS	AB=1.000;AC=22;AF=0.393;AN=56;BaseQRankSum=14.296;DP=595;FS=10.153;HRun=7;HaplotypeScore=67.7895;InbreedingCoeff=0.8469;MQ=73.58;MQ0=0;MQRankSum=0.176;QD=19.91;ReadPosRankSum=2.228;VQSLOD=3.8193;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:84.26:0,84,1043	0/1:14,0:14:16.65:17,0,29	0/0:17,0:15:10.20:0,10,105	0/0:15,0:14:15.98:0,16,123	1/1:2,28:30:83.93:790,84,0	1/1:22,0:22:8.55:52,9,0	0/1:10,0:10:6.21:6,0,37	0/0:30,0:30:75.21:0,75,907	0/0:14,0:14:39.01:0,39,443	1/1:1,28:29:84.08:818,84,0	1/1:0,15:15:39.05:387,39,0	0/0:21,0:21:54.15:0,54,655	0/0:16,0:16:45.13:0,45,544	0/0:32,0:32:84.25:0,84,1033	1/1:13,0:13:17.82:46,18,0	0/0:14,0:14:33.09:0,33,402	1/1:0,28:28:72.16:734,72,0	1/1:4,26:30:69.15:704,69,0	0/0:22,0:22:48.12:0,48,569	0/0:27,0:27:78.21:0,78,941	0/0:11,0:11:30.07:0,30,350	0/0:22,0:22:54.16:0,54,666	0/0:22,0:22:63.20:0,63,789	0/0:17,0:17:42.09:0,42,488	1/1:3,13:16:33.07:336,33,0	1/1:4,23:27:69.13:691,69,0	0/0:31,0:31:93.27:0,93,1143	1/1:4,15:19:45.09:459,45,0
chr10	47503948	.	TA	T	1724.61	PASS	AB=1.000;AC=24;AF=0.429;AN=56;BaseQRankSum=17.180;DP=575;FS=1.612;HRun=7;HaplotypeScore=75.0961;InbreedingCoeff=0.6988;MQ=72.07;MQ0=0;MQRankSum=-1.084;QD=6.53;ReadPosRankSum=4.469;VQSLOD=-0.1006;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:90.21:0,90,1076	1/1:2,11:13:30.07:306,30,0	0/1:13,0:11:9.56:10,0,51	0/1:12,0:10:7.57:8,0,71	1/1:30,0:30:2.14:84,2,0	1/1:1,18:19:51.12:519,51,0	1/1:2,8:10:21.04:214,21,0	0/0:30,0:30:87.19:0,87,999	0/0:14,0:14:39.10:0,39,460	0/1:31,0:31:21.02:38,0,21	1/1:15,0:15:19.81:50,20,0	0/0:22,0:22:60.14:0,60,696	0/0:15,0:15:39.12:0,39,485	0/0:30,0:30:84.23:0,84,1019	1/1:0,12:12:30.07:305,30,0	0/0:14,0:14:39.08:0,39,447	1/1:29,0:29:26.76:119,27,0	0/1:29,0:29:12.47:74,0,12	0/0:18,0:18:51.11:0,51,592	0/0:29,0:29:84.24:0,84,1012	0/0:13,0:13:33.07:0,33,383	0/0:20,0:20:57.16:0,57,686	0/0:26,0:26:75.16:0,75,867	0/0:15,0:15:36.11:0,36,448	1/1:13,0:13:20.57:59,21,0	1/1:23,0:23:29.48:69,29,0	0/0:34,0:34:99:0,99,1161	1/1:15,0:15:29.58:83,30,0
chr10	47505205	.	G	GTCTC	2878.08	PASS	AB=1.000;AC=28;AF=0.500;AN=56;BaseQRankSum=-4.914;DP=753;FS=22.865;HRun=0;HaplotypeScore=217.7062;InbreedingCoeff=0.6547;MQ=51.39;MQ0=9;MQRankSum=-2.240;QD=6.47;ReadPosRankSum=-2.859;VQSLOD=0.8644;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:83.45:0,83,1312	0/0:4,0:5:4.41:0,4,80	0/0:23,0:5:12.01:0,12,165	0/0:20,0:7:11.95:0,12,177	0/0:19,0:22:10.31:0,10,302	0/0:22,0:23:14.82:0,15,357	0/0:24,0:25:16.36:0,16,244	1/1:34,0:32:27.85:124,28,0	1/1:3,22:26:5.75:137,6,0	0/0:28,0:35:49.39:0,49,704	0/0:13,0:19:5.44:0,5,182	1/1:4,25:30:9.03:194,9,0	1/1:4,14:19:0.63:166,1,0	1/1:19,1:20:12.04:266,12,0	0/0:26,0:31:40.80:0,41,567	1/1:38,0:39:60.96:629,61,0	0/1:22,0:24:12.67:13,0,160	0/1:22,0:26:27.25:27,0,347	1/1:23,0:22:22.03:150,22,0	1/1:29,0:28:11.15:238,11,0	1/1:33,1:34:6.02:138,6,0	1/1:1,26:26:9.03:221,9,0	1/1:6,30:37:3.01:45,3,0	1/1:11,41:53:1.09:471,1,0	0/0:13,0:13:18.43:0,18,247	0/0:28,0:37:13.52:0,14,409	1/1:19,0:21:20.10:260,20,0	0/0:11,0:10:11.99:0,12,142
chr10	47505209	.	CTCTCTGTGTG	C	9406.84	PASS	AB=1.000;AC=25;AF=0.446;AN=56;BaseQRankSum=0.137;DP=770;FS=29.486;HRun=0;HaplotypeScore=241.3294;InbreedingCoeff=0.9209;MQ=51.31;MQ0=9;MQRankSum=-1.186;QD=30.54;ReadPosRankSum=1.129;VQSLOD=3.1085;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,103,2757	1/1:6,0:6:14.95:159,15,0	0/0:20,0:4:12.04:0,12,237	0/1:20,0:7:1.73:2,0,226	1/1:22,1:23:29.55:579,30,0	1/1:26,0:24:44.92:721,45,0	1/1:25,0:24:27.04:402,27,0	0/0:32,0:31:89.65:0,90,1109	0/0:27,0:26:12.04:0,12,298	1/1:38,0:38:99:2277,111,0	1/1:20,1:21:33.03:703,33,0	0/0:34,0:33:24.08:0,24,477	0/0:19,0:19:15.51:0,16,300	0/0:21,0:21:18.06:0,18,527	1/1:33,0:33:60.02:873,60,0	0/0:41,0:41:80.19:0,80,1867	1/1:27,0:26:29.90:458,30,0	1/1:30,0:30:36.88:1039,37,0	0/0:24,0:23:68.95:0,69,1074	0/0:29,0:28:16.12:0,16,381	0/0:33,0:33:8.53:0,9,191	0/0:30,0:29:12.01:0,12,182	0/0:35,0:35:11.05:0,11,140	0/0:55,0:54:34.34:0,34,892	1/1:13,0:13:21.02:351,21,0	1/1:10,25:35:89.77:1583,90,0	0/0:22,0:22:30.10:0,30,578	1/1:9,2:10:20.96:260,21,0
chr10	47505213	.	C	CTCTGTG	2352.97	PASS	AB=0.884;AC=16;AF=0.286;AN=56;BaseQRankSum=-7.760;DP=757;FS=22.375;HRun=0;HaplotypeScore=240.8502;InbreedingCoeff=0.2706;MQ=51.03;MQ0=12;MQRankSum=-2.206;QD=6.43;ReadPosRankSum=1.297;VQSLOD=1.1983;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:92.64:0,93,1380	0/0:5,0:5:8.93:0,9,68	0/0:20,0:4:11.97:0,12,117	0/0:18,0:6:11.89:0,12,118	0/0:21,0:21:32.60:0,33,241	0/0:26,0:24:44.24:0,44,345	0/0:25,0:24:5.76:0,6,125	1/1:32,0:28:86.42:803,86,0	0/1:29,0:28:18.50:18,0,105	0/0:39,0:39:99:0,104,757	0/0:22,0:22:28.84:0,29,241	0/1:33,0:32:17.56:18,0,128	0/1:16,0:16:19.49:19,0,61	0/1:5,0:21:12.41:163,0,12	0/0:31,0:31:53.48:0,53,392	0/1:41,0:41:99:114,0,207	0/0:26,0:25:26.54:0,27,224	0/0:28,0:28:24.49:0,24,255	1/1:23,0:22:32.54:437,33,0	1/1:2,0:30:12.04:187,12,0	0/1:5,0:34:7.76:58,0,8	0/1:29,0:28:15.64:51,0,16	0/0:33,0:33:2.80:0,3,13	0/1:51,0:52:93.56:94,0,150	0/0:12,0:12:17.44:0,17,112	0/0:36,0:36:65.26:0,65,531	1/1:5,15:24:19.28:572,19,0	0/0:9,0:8:14.67:0,15,91
chr10	47505223	.	GTGTGTGTGTGTGTGTA	G	1550.96	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=0.521;DP=718;FS=2.403;HRun=0;HaplotypeScore=290.0814;InbreedingCoeff=0.7133;MQ=50.15;MQ0=10;MQRankSum=-4.712;QD=14.91;ReadPosRankSum=-0.639;VQSLOD=2.0524;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:61.15:0,61,3486	1/1:4,1:5:6.02:183,6,0	0/0:16,0:2:5.99:0,6,93	0/0:17,0:4:2.98:0,3,22	0/0:26,0:26:23.24:0,23,527	1/1:22,3:23:18.53:583,19,0	1/1:23,2:24:9.03:239,9,0	1/1:23,0:19:33:212,33,0	0/0:30,0:29:19.55:0,20,1143	0/0:42,0:42:46.20:0,46,1858	0/0:25,0:25:7.55:0,8,508	0/0:32,0:31:30.10:0,30,1626	0/0:17,0:17:24.55:0,25,1156	0/0:18,0:18:15.05:0,15,988	1/1:21,5:26:15.52:492,16,0	0/0:39,0:39:60.02:0,60,2371	0/0:26,0:25:12.04:0,12,159	0/0:27,0:27:4.65:0,5,426	0/0:20,0:19:2.27:0,2,566	0/0:28,0:27:24.64:0,25,1119	0/0:27,0:27:8.53:0,9,427	0/0:25,0:24:14.17:0,14,626	0/0:31,0:31:11.07:0,11,303	0/0:47,0:46:27.43:0,27,2557	0/0:11,0:11:2.50:0,3,78	0/0:39,0:39:56.56:0,57,1385	0/0:26,0:26:42.35:0,42,1990	0/0:8,0:8:3.01:0,3,46
chr10	47505235	.	GTGTA	G	3596.44	PASS	AB=1.000;AC=30;AF=0.536;AN=56;BaseQRankSum=5.917;DP=697;FS=3.125;HRun=0;HaplotypeScore=173.1738;InbreedingCoeff=0.6413;MQ=50.92;MQ0=10;MQRankSum=-5.982;QD=8.44;ReadPosRankSum=-0.677;VQSLOD=2.4771;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:60.29:0,60,1195	1/1:3,0:3:5.95:54,6,0	0/1:17,0:5:10.17:33,0,10	0/0:11,0:2:5.02:0,5,28	1/1:24,3:27:14.74:252,15,0	1/1:25,1:24:18.53:251,19,0	1/1:24,0:23:8.88:70,9,0	1/1:25,0:21:56.78:389,57,0	0/0:33,0:32:15.22:0,15,399	1/1:34,6:39:14.63:821,15,0	1/1:15,8:23:19.28:254,19,0	0/0:32,0:31:41.99:0,42,561	0/0:18,0:18:9.10:0,9,306	0/0:18,0:18:24:0,24,376	1/1:23,0:23:15.45:159,15,0	0/1:41,0:41:12.90:13,0,380	1/1:6,22:28:13.12:173,13,0	1/1:26,2:28:19.22:237,19,0	0/0:20,0:19:13.71:0,14,338	0/0:26,0:25:30.15:0,30,373	0/0:25,0:25:8.06:0,8,122	0/1:21,0:20:6.28:6,0,146	0/0:29,0:29:8.82:0,9,74	0/1:48,0:47:0.55:1,0,922	1/1:9,0:9:3.48:46,3,0	1/1:28,9:37:36.85:788,37,0	0/0:26,0:26:44.39:0,44,614	1/1:6,0:6:3.01:49,3,0
chr10	47505237	.	GTA	G	2584.91	PASS	AB=0.976;AC=28;AF=0.500;AN=56;BaseQRankSum=6.545;DP=687;FS=6.979;HRun=0;HaplotypeScore=159.2603;InbreedingCoeff=0.5642;MQ=51.03;MQ0=8;MQRankSum=-4.204;QD=6.97;ReadPosRankSum=-0.111;VQSLOD=2.5527;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:60.22:0,60,856	1/1:1,2:3:5.93:51,6,0	0/1:18,0:7:27.14:27,0,49	0/0:11,0:2:3.87:0,4,24	1/1:24,1:25:16.45:195,16,0	1/1:6,17:22:18.04:216,18,0	1/1:9,14:22:8.88:70,9,0	1/1:26,0:22:59.78:415,60,0	0/0:33,0:32:12.04:0,12,253	0/1:37,2:38:26.50:493,0,27	1/1:23,1:24:19.18:184,19,0	0/0:32,0:31:39.45:0,39,407	0/0:17,0:17:9.09:0,9,227	0/0:18,0:18:23.96:0,24,257	1/1:6,16:22:14.87:157,15,0	0/1:40,2:42:71.85:72,0,176	1/1:24,1:25:11.86:107,12,0	1/1:29,0:29:13.58:213,14,0	0/0:18,3:20:17.47:0,17,336	0/0:24,0:23:30.13:0,30,280	0/0:24,0:24:8.06:0,8,102	0/1:20,0:19:13.40:13,0,124	0/0:28,0:28:7.89:0,8,72	0/0:49,0:48:5.42:0,5,719	1/1:2,6:8:2.97:20,3,0	1/1:37,0:37:35.52:524,36,0	0/0:28,0:28:47.65:0,48,404	1/1:6,0:6:3:28,3,0
chr10	47505239	.	A	ATG	2588.63	PASS	AB=0.964;AC=19;AF=0.339;AN=56;BaseQRankSum=3.073;DP=687;FS=1.680;HRun=0;HaplotypeScore=157.8661;InbreedingCoeff=0.4926;MQ=51.70;MQ0=8;MQRankSum=-2.267;QD=8.80;ReadPosRankSum=2.387;VQSLOD=3.6873;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:57.78:0,58,603	0/0:3,0:3:2.92:0,3,17	0/0:20,0:8:7.10:0,7,58	0/0:12,0:3:0.89:0,1,2	0/1:22,2:25:2.57:338,0,3	0/0:21,0:21:16.94:0,17,84	0/0:18,0:17:2.90:0,3,16	1/1:23,0:19:1.85:24,2,0	0/0:31,0:31:20.71:0,21,236	0/1:41,0:40:21.93:554,0,22	1/1:24,1:25:3.13:397,3,0	0/0:32,0:31:37.07:0,37,460	0/0:18,0:18:26.57:0,27,279	0/0:18,0:18:22.26:0,22,179	0/0:21,0:21:11.61:0,12,64	1/1:18,26:44:5.82:431,6,0	1/1:27,0:26:2.32:76,2,0	1/1:16,12:28:17.86:166,18,0	0/0:21,0:20:38.89:0,39,397	0/0:24,0:23:21.16:0,21,187	0/0:25,0:25:5.88:0,6,50	0/0:21,0:20:14.70:0,15,152	0/0:27,0:27:14.38:0,14,135	0/0:49,0:49:64.54:0,65,667	1/1:8,0:8:3.01:46,3,0	1/1:36,1:38:4.55:656,5,0	0/1:29,0:29:20.77:21,0,236	1/1:3,3:6:3.01:45,3,0
chr10	47508738	.	AAC	A	1854.86	PASS	AB=0.987;AC=14;AF=0.250;AN=56;BaseQRankSum=-5.782;DP=625;FS=4.556;HRun=0;HaplotypeScore=157.1540;InbreedingCoeff=0.5693;MQ=65.12;MQ0=15;MQRankSum=1.265;QD=9.56;ReadPosRankSum=-5.117;VQSLOD=2.1900;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:40:89.41:0,89,1245	0/0:11,0:11:26.12:0,26,275	0/0:41,1:19:1.48:0,1,161	0/1:43,0:18:9.26:9,0,141	0/0:25,0:24:58.82:0,59,593	0/0:26,0:25:66.25:0,66,592	0/0:17,0:17:30.23:0,30,436	0/0:19,0:19:48.70:0,49,478	0/0:15,0:15:29.03:0,29,180	0/0:29,0:28:68.48:0,68,740	0/0:18,0:18:54.13:0,54,591	0/0:14,0:14:23.70:0,24,146	0/1:15,0:15:35.20:35,0,87	1/1:9,14:23:32.29:369,32,0	0/0:20,0:20:45.47:0,45,428	0/1:15,0:15:21.89:22,0,182	0/0:20,0:17:46.65:0,47,498	0/0:22,0:22:54.28:0,54,545	1/1:23,3:25:63.56:565,64,0	1/1:14,8:22:46.51:608,47,0	1/1:2,7:8:9.03:135,9,0	0/1:17,1:18:30.28:30,0,138	0/0:17,0:17:6.77:0,7,168	0/0:22,0:22:27.80:0,28,222	0/0:25,0:25:72.15:0,72,794	0/0:35,0:34:75.55:0,76,865	1/1:5,18:23:25.37:263,25,0	0/0:12,0:12:31.39:0,31,320
chr10	47508739	.	AC	A	1990.64	PASS	AB=0.974;AC=20;AF=0.357;AN=56;BaseQRankSum=-4.852;DP=625;FS=2.750;HRun=1;HaplotypeScore=150.5584;InbreedingCoeff=0.3286;MQ=62.52;MQ0=16;MQRankSum=-0.257;QD=6.64;ReadPosRankSum=-3.272;VQSLOD=-0.5156;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:39:78.85:0,79,970	0/0:11,0:11:29.60:0,30,220	0/1:42,0:17:22.23:22,0,146	0/1:42,3:18:18.70:19,0,115	0/0:25,0:24:62.78:0,63,433	0/0:26,0:25:70.59:0,71,491	0/0:17,0:17:30.18:0,30,338	0/0:19,0:19:52.65:0,53,408	0/1:13,0:13:33.17:33,0,56	0/0:32,0:31:46.47:0,46,546	0/0:18,0:18:53.56:0,54,391	0/1:13,0:13:32.68:33,0,33	1/1:13,1:14:1.31:99,1,0	1/1:17,6:23:32.90:284,33,0	0/0:20,0:20:50.14:0,50,353	0/1:14,0:14:44.88:45,0,127	0/0:21,0:18:50.39:0,50,359	0/0:23,0:23:39.02:0,39,396	1/1:24,2:25:68.03:592,68,0	1/1:20,2:22:60.75:540,61,0	1/1:8,0:7:9.01:81,9,0	0/1:18,0:18:36.61:59,0,37	0/1:15,2:17:52.67:53,0,77	0/1:21,1:22:77.90:84,0,78	0/0:25,0:25:71.60:0,72,549	0/0:35,0:35:89.97:0,90,687	1/1:21,2:23:25.47:235,25,0	0/0:12,0:12:35.59:0,36,253
chr10	47508740	.	CA	C	1305.02	PASS	AB=0.993;AC=21;AF=0.375;AN=56;BaseQRankSum=-6.762;DP=629;FS=27.406;HRun=12;HaplotypeScore=155.9463;InbreedingCoeff=0.7002;MQ=61.24;MQ0=20;MQRankSum=4.039;QD=5.35;ReadPosRankSum=1.257;VQSLOD=-0.0205;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,4:37:4.26:0,4,726	0/0:11,0:11:24.98:0,25,97	0/1:44,1:16:6.96:16,0,7	0/0:45,1:19:1.52:0,2,106	0/0:25,0:24:56.10:0,56,227	0/0:24,0:23:51.87:0,52,207	0/0:17,0:17:37.19:0,37,147	0/0:19,0:19:29.46:0,29,113	1/1:6,6:12:10.09:143,10,0	0/0:32,0:31:62.96:0,63,242	0/0:18,0:18:45.22:0,45,188	1/1:6,7:13:19.77:177,20,0	1/1:7,8:15:25.31:229,25,0	1/1:23,0:23:13.69:46,14,0	0/0:21,0:21:44.15:0,44,184	0/0:14,0:15:24.13:0,24,153	0/0:21,0:18:43.21:0,43,183	0/0:22,0:22:36.60:0,37,147	0/1:24,0:22:23.47:36,0,23	0/1:23,0:23:24.97:48,0,25	1/1:8,0:7:4.93:12,5,0	1/1:7,10:18:33.43:243,33,0	1/1:10,8:19:34.86:260,35,0	1/1:7,13:20:32.61:256,33,0	0/0:26,0:26:58.81:0,59,245	0/0:38,0:36:73.40:0,73,304	1/1:24,0:24:10.91:43,11,0	0/0:12,0:12:29.56:0,30,116
chr10	47508744	.	A	AC	9663.97	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=1.420;DP=623;FS=10.103;HRun=0;HaplotypeScore=129.7760;InbreedingCoeff=0.8139;MQ=58.15;MQ0=20;MQRankSum=-4.399;QD=24.97;ReadPosRankSum=3.734;VQSLOD=4.9266;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:38:99:0,114,1339	1/1:0,11:11:30.01:394,30,0	0/1:44,0:14:10.23:10,0,109	0/1:43,0:16:7.09:7,0,194	1/1:5,21:25:69.17:861,69,0	1/1:4,20:23:69.20:869,69,0	1/1:4,13:17:47.98:583,48,0	1/1:2,16:18:25.43:524,25,0	0/0:12,0:12:29.95:0,30,264	1/1:3,28:30:85.50:1078,85,0	1/1:2,16:18:54.15:690,54,0	0/0:12,0:12:32.84:0,33,256	0/0:17,0:17:47.85:0,48,384	0/0:22,0:22:30.33:0,30,244	1/1:3,19:22:57:695,57,0	0/1:14,0:14:4.42:4,0,109	1/1:5,18:20:56.94:662,57,0	1/1:5,15:20:44.40:644,44,0	0/0:25,0:23:61.07:0,61,521	0/0:22,0:22:59.73:0,60,499	0/0:8,0:7:8.99:0,9,78	0/0:17,0:17:45.59:0,46,343	0/0:19,0:19:50.65:0,51,393	0/0:19,0:19:53.66:0,54,408	1/1:6,21:27:75.15:924,75,0	1/1:7,30:35:99:1245,103,0	0/0:24,0:24:29.23:0,29,252	1/1:0,12:12:36.12:473,36,0
chr10	47508757	.	AAAAC	A	3660.89	PASS	AB=1.000;AC=25;AF=0.446;AN=56;BaseQRankSum=10.194;DP=595;FS=2.180;HRun=0;HaplotypeScore=171.8376;InbreedingCoeff=0.8914;MQ=51.37;MQ0=20;MQRankSum=-8.201;QD=11.96;ReadPosRankSum=2.450;VQSLOD=3.0169;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:32:84.28:0,84,1927	1/1:6,4:10:20.96:263,21,0	0/1:29,0:6:6.53:7,0,37	0/0:32,0:11:14.99:0,15,237	1/1:30,0:29:48.16:190,48,0	1/1:8,14:22:51.05:772,51,0	1/1:6,10:16:30.08:459,30,0	0/0:18,0:18:36.01:0,36,580	0/0:11,0:11:27.08:0,27,484	1/1:31,0:30:58.88:222,59,0	1/1:18,0:18:28.09:107,28,0	0/0:12,0:12:27.02:0,27,486	0/0:19,0:19:42.12:0,42,794	0/0:21,0:21:20.50:0,21,512	1/1:14,13:27:63.02:927,63,0	0/0:15,0:15:32.98:0,33,615	1/1:23,0:19:32.21:140,32,0	1/1:19,0:19:3.17:99,3,0	0/0:21,0:18:33.08:0,33,676	0/0:22,0:22:48.16:0,48,1013	0/0:8,0:7:9.03:0,9,212	0/0:17,0:17:36.97:0,37,595	0/0:18,0:18:33.09:0,33,597	0/0:21,0:21:32.56:0,33,505	1/1:29,0:29:45.24:164,45,0	1/1:36,0:34:60.31:224,60,0	0/0:21,0:21:8.17:0,8,503	1/1:16,0:16:12.32:87,12,0
chr10	47508769	.	CA	C	5921.11	PASS	AB=0.989;AC=21;AF=0.375;AN=56;BaseQRankSum=10.731;DP=572;FS=8.010;HRun=3;HaplotypeScore=129.7189;InbreedingCoeff=0.7550;MQ=52.73;MQ0=18;MQRankSum=-8.297;QD=21.85;ReadPosRankSum=4.040;VQSLOD=3.7547;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:87.27:0,87,1213	1/1:7,0:7:6.46:16,6,0	0/0:24,0:6:11.92:0,12,90	0/0:24,0:11:20.83:0,21,169	1/1:7,24:31:87.16:921,87,0	0/1:21,0:21:17.24:17,0,57	0/1:15,0:15:6.85:7,0,28	0/0:17,0:17:38.99:0,39,519	0/0:14,0:14:29.69:0,30,388	1/1:5,25:30:84.22:955,84,0	1/1:3,16:19:57.10:598,57,0	0/0:12,0:12:32.69:0,33,409	0/0:19,0:19:52.26:0,52,588	0/0:18,0:19:31.75:0,32,384	0/1:28,0:29:16.56:17,0,129	0/0:14,0:14:33.10:0,33,433	1/1:3,18:18:44.40:502,44,0	1/1:3,14:17:9.94:474,10,0	0/0:21,0:18:48.12:0,48,621	0/0:23,0:23:60.09:0,60,797	0/0:8,0:8:12.04:0,12,170	0/0:13,0:13:36.59:0,37,482	0/0:15,0:15:38.30:0,38,482	0/0:21,0:21:41.60:0,42,496	1/1:4,24:27:78.18:861,78,0	1/1:5,27:30:87.20:967,87,0	0/0:24,0:24:34.13:0,34,515	1/1:3,17:18:51.14:587,51,0
chr10	47508773	.	CA	C	3122.52	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=10.622;DP=551;FS=12.002;HRun=10;HaplotypeScore=135.6854;InbreedingCoeff=0.8898;MQ=54.72;MQ0=13;MQRankSum=-6.059;QD=14.66;ReadPosRankSum=3.472;VQSLOD=2.6091;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,1:30:78.17:0,78,837	1/1:6,0:6:2.19:7,2,0	0/0:19,0:6:11.95:0,12,114	0/0:21,0:11:18:0,18,181	1/1:7,23:30:70.97:518,71,0	0/0:21,0:21:6.01:0,6,67	0/1:12,0:12:0.01:0,0,0	0/0:15,0:15:30.03:0,30,309	0/0:5,0:15:20.01:0,20,95	1/1:5,24:29:80.49:619,80,0	1/1:2,16:18:47.20:328,47,0	0/0:3,0:12:26.27:0,26,136	0/0:7,0:20:42.35:0,42,253	0/0:21,0:21:35.45:0,35,324	0/0:28,0:28:2.69:0,3,142	0/0:3,0:15:31.41:0,31,168	1/1:8,15:19:32.83:252,33,0	1/1:5,11:16:32.65:249,33,0	0/0:22,0:21:25.45:0,25,482	0/0:21,0:21:51.10:0,51,548	0/0:7,0:7:11.98:0,12,112	0/0:3,0:11:25.69:0,26,133	0/0:0,0:14:33.52:0,34,165	0/0:7,0:19:24.16:0,24,113	1/1:3,24:26:55.25:486,55,0	1/1:5,27:30:80.26:608,80,0	0/0:24,0:24:32.99:0,33,357	1/1:7,13:18:26.64:258,27,0
chr10	47508774	.	A	AAC	2161.42	PASS	AB=0.974;AC=13;AF=0.232;AN=56;BaseQRankSum=7.064;DP=550;FS=3.716;HRun=0;HaplotypeScore=147.6765;InbreedingCoeff=0.6917;MQ=54.91;MQ0=12;MQRankSum=-5.629;QD=10.81;ReadPosRankSum=4.374;VQSLOD=3.4019;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:30:90.18:0,90,1211	0/0:6,0:6:17.79:0,18,123	0/0:18,0:6:12:0,12,124	0/0:18,0:10:20.95:0,21,235	1/1:27,2:29:27.14:443,27,0	0/0:20,0:20:53.63:0,54,430	0/0:12,0:12:26.81:0,27,196	0/0:14,0:14:38.93:0,39,454	0/0:14,0:14:21.41:0,21,94	1/1:28,1:29:47.02:354,47,0	1/1:19,0:19:16.74:278,17,0	0/0:12,0:12:26.89:0,27,119	0/0:20,0:20:43.60:0,44,264	0/0:21,0:21:41.92:0,42,467	0/0:28,0:28:77.05:0,77,631	0/0:15,0:15:28.24:0,28,118	0/1:22,2:20:20.29:127,0,20	0/1:18,0:18:20.37:154,0,20	0/0:23,0:21:59.95:0,60,730	0/0:22,0:22:63.03:0,63,826	0/0:7,0:7:11.99:0,12,138	0/0:11,0:11:29.13:0,29,145	0/0:14,0:14:31.33:0,31,126	0/0:19,0:19:27.98:0,28,125	1/1:27,1:27:38.84:402,39,0	1/1:32,0:30:63.01:453,63,0	0/0:24,0:24:44.90:0,45,563	0/1:21,0:19:12.52:135,0,13
chr10	47509365	.	T	TG	15093.60	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=0.816;DP=831;FS=0.259;HRun=0;HaplotypeScore=88.9710;InbreedingCoeff=0.9991;MQ=79.50;MQ0=0;MQRankSum=-2.613;QD=43.50;ReadPosRankSum=0.827;VQSLOD=5.0657;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:93.29:0,93,1282	1/1:0,13:13:30.10:480,30,0	0/0:28,0:28:72.13:0,72,957	0/0:10,0:10:23.93:0,24,313	1/1:0,37:37:99:1726,108,0	1/1:1,39:40:99:1822,114,0	1/1:0,29:29:78.27:1247,78,0	0/0:32,0:32:93.29:0,93,1256	0/0:29,0:29:87.26:0,87,1183	1/1:1,35:36:99:1653,105,0	1/1:1,22:23:60.20:954,60,0	0/0:29,0:29:81.27:0,81,1133	0/0:34,0:34:99:0,99,1351	0/0:31,0:31:93.31:0,93,1301	1/1:0,47:47:99:1871,117,0	0/0:40,0:40:99:0,120,1678	1/1:1,35:36:96.33:1534,96,0	1/1:0,17:17:48.16:767,48,0	0/0:20,0:20:60.20:0,60,838	0/0:25,0:25:75.24:0,75,1033	0/0:38,0:38:99:0,111,1516	0/0:33,0:33:96.31:0,96,1325	0/0:31,0:31:93.25:0,93,1259	0/0:34,0:34:99:0,102,1392	1/1:0,23:23:60.20:959,60,0	1/1:2,37:39:99:1744,114,0	0/0:38,0:38:99:0,114,1595	1/1:0,7:7:21.07:336,21,0
chr10	47510773	.	GTTTATTTTAT	G	5441.78	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=5.554;DP=457;FS=8.275;HRun=0;HaplotypeScore=159.2642;InbreedingCoeff=0.8743;MQ=70.12;MQ0=1;MQRankSum=-9.257;QD=40.61;ReadPosRankSum=4.506;VQSLOD=4.0779;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:75.26:0,75,3360	0/0:4,0:4:12.04:0,12,580	0/0:12,0:9:5.97:0,6,170	0/0:21,0:17:30.08:0,30,1009	1/1:16,8:24:18.06:547,18,0	0/0:21,0:21:30.10:0,30,1351	0/0:19,0:19:33.10:0,33,1230	0/0:42,0:41:69.24:0,69,2791	0/0:4,0:6:9.03:0,9,404	1/1:13,7:20:30.10:803,30,0	1/1:7,7:14:21.07:602,21,0	0/0:6,0:10:21.06:0,21,757	0/0:6,0:8:9.03:0,9,359	0/0:4,0:7:9.03:0,9,353	0/0:22,0:22:33.11:0,33,1446	0/0:8,0:8:12.04:0,12,605	1/1:9,3:11:12.04:328,12,0	1/1:7,7:14:30.09:746,30,0	0/0:23,0:35:69.24:0,69,2678	0/0:9,0:13:30.10:0,30,1031	0/0:14,0:14:9.03:0,9,289	0/0:5,0:5:3.01:0,3,131	0/0:7,0:10:15.05:0,15,599	0/0:7,0:12:6.02:0,6,180	1/1:7,7:14:30:790,30,0	1/1:11,13:23:45.15:1293,45,0	0/0:6,0:20:18.06:0,18,656	1/1:9,3:12:12.04:332,12,0
chr10	47510815	.	TC	T	622.90	PASS	AB=0.852;AC=6;AF=0.107;AN=56;BaseQRankSum=4.925;DP=456;FS=7.684;HRun=1;HaplotypeScore=124.0476;InbreedingCoeff=-0.1219;MQ=64.46;MQ0=0;MQRankSum=-4.634;QD=5.61;ReadPosRankSum=-2.151;VQSLOD=-0.5720;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:94.87:0,95,1491	0/0:6,0:6:17.86:0,18,174	0/0:13,0:10:29.59:0,30,428	0/0:28,1:28:74.47:0,74,1020	0/1:19,3:22:73.40:73,0,482	0/0:18,0:18:32.66:0,33,271	0/0:13,0:13:26.73:0,27,227	0/1:22,13:35:99:424,0,827	0/0:10,0:10:30.10:0,30,480	0/1:15,3:18:57.43:57,0,502	0/0:15,2:17:18.29:0,18,373	0/0:9,0:9:27.08:0,27,409	0/0:14,0:14:39.13:0,39,623	0/0:12,0:12:33.10:0,33,500	0/0:22,0:22:44.05:0,44,361	0/0:14,0:14:42.14:0,42,672	0/1:8,1:9:24.07:24,0,200	0/0:13,3:16:25.44:0,25,479	0/0:21,0:21:63.17:0,63,959	0/0:15,0:15:45.15:0,45,719	0/0:6,0:6:18.04:0,18,264	0/0:6,0:6:18.06:0,18,288	0/0:15,0:15:45.14:0,45,694	0/0:8,0:8:18.02:0,18,260	0/1:16,3:19:63.04:63,0,353	0/0:25,0:25:48.20:0,48,842	0/0:24,0:24:57.19:0,57,907	0/1:6,1:7:99:106,0,124
chr10	47510816	.	C	CTGTTGTTGTTGT	11475.63	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-3.368;DP=494;FS=25.068;HRun=0;HaplotypeScore=200.4242;InbreedingCoeff=0.9637;MQ=63.57;MQ0=0;MQRankSum=-7.978;QD=55.44;ReadPosRankSum=-2.831;VQSLOD=2.8080;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:32:79.79:0,80,2409	0/0:2,0:6:12.04:0,12,335	0/0:12,0:10:9:0,9,186	0/0:30,0:29:47.50:0,48,1144	1/1:15,7:25:21.07:1144,21,0	0/0:2,0:17:24.08:0,24,671	0/0:2,0:13:20.54:0,21,365	1/1:34,0:34:42.13:1097,42,0	0/0:10,0:10:30.10:0,30,994	1/1:13,5:25:42.14:1919,42,0	1/1:12,3:21:21.03:923,21,0	0/0:8,0:8:24.08:0,24,844	0/0:14,0:14:39.13:0,39,1279	0/0:12,0:12:30.09:0,30,891	0/0:4,0:22:39:0,39,969	0/0:15,0:15:42.12:0,42,1215	1/1:8,2:15:8.90:334,9,0	1/1:12,4:18:24.08:1176,24,0	0/0:21,0:21:39.13:0,39,1123	0/0:15,0:15:39.13:0,39,1344	0/0:6,0:6:18.04:0,18,517	0/0:6,0:6:18.06:0,18,604	0/0:15,0:15:42.11:0,42,1097	0/0:8,0:8:18.02:0,18,483	1/1:12,7:23:30.10:1697,30,0	1/1:17,7:37:63.19:2954,63,0	0/0:24,0:24:54.19:0,54,1748	1/1:7,0:7:11.06:232,11,0
chr10	47512689	.	GA	G	4957.84	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=7.520;DP=563;FS=0.000;HRun=9;HaplotypeScore=60.8384;InbreedingCoeff=0.9660;MQ=82.08;MQ0=1;MQRankSum=-2.557;QD=22.85;ReadPosRankSum=4.207;VQSLOD=5.4590;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,1:34:65.81:0,66,1011	1/1:0,6:6:18.01:165,18,0	0/0:24,0:21:47.93:0,48,484	0/0:24,0:20:25.45:0,25,285	1/1:2,16:18:45.02:412,45,0	1/1:0,17:17:42.02:384,42,0	1/1:1,28:29:75.04:687,75,0	0/0:6,0:31:68.24:0,68,358	0/0:23,0:23:63.19:0,63,725	1/1:1,22:23:66.04:603,66,0	1/1:1,11:12:30.01:275,30,0	0/0:24,0:24:63.19:0,63,727	0/0:18,0:18:54.16:0,54,623	0/0:22,0:22:57.16:0,57,651	1/1:1,26:27:78.04:714,78,0	0/0:3,0:10:17.20:0,17,97	1/1:4,15:19:1.40:267,1,0	1/1:1,14:15:30.01:275,30,0	0/0:35,0:35:90.27:0,90,1038	0/0:12,0:12:36.10:0,36,407	0/0:20,0:20:53.83:0,54,600	0/0:19,0:19:54.15:0,54,614	0/0:13,0:13:36.11:0,36,414	0/0:19,1:20:26.69:0,27,561	1/1:2,17:19:39.02:357,39,0	1/1:1,21:22:63.02:573,63,0	0/0:17,0:17:51.15:0,51,588	1/1:0,10:10:27.01:247,27,0
chr10	47512903	.	CCG	C	4536.32	PASS	AB=0.997;AC=28;AF=0.500;AN=56;BaseQRankSum=-4.942;DP=504;FS=37.694;HRun=0;HaplotypeScore=110.5834;InbreedingCoeff=-0.1598;MQ=92.05;MQ0=0;MQRankSum=-0.721;QD=11.60;ReadPosRankSum=-5.545;VQSLOD=2.0433;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:93.22:0,93,1528	0/1:6,0:6:34.49:34,0,40	0/0:28,0:28:71.26:0,71,1188	0/0:16,0:16:30.65:0,31,549	0/1:18,0:18:72.25:113,0,72	0/1:19,1:20:91.53:92,0,155	0/1:25,0:25:35.12:35,0,247	1/1:20,0:20:41.89:274,42,0	0/1:19,0:18:3.68:4,0,32	0/1:18,0:18:68.62:69,0,104	0/0:10,0:10:2.44:0,2,78	0/0:23,0:23:7.22:0,7,70	0/1:18,0:18:22.68:42,0,23	1/1:1,24:25:66.22:1009,66,0	0/1:17,0:17:50.88:51,0,95	0/0:5,0:5:2.72:0,3,57	0/1:26,0:26:52.93:53,0,139	0/1:12,0:12:19.90:20,0,90	1/1:3,9:12:27.53:371,28,0	1/1:1,11:12:30.10:458,30,0	1/1:2,24:26:54.18:826,54,0	0/1:19,0:19:4.78:5,0,64	0/1:18,0:18:50.04:54,0,50	0/1:19,0:19:28.94:29,0,54	0/1:15,0:15:37.87:38,0,117	0/1:13,0:13:32.31:32,0,74	1/1:1,22:23:60.20:917,60,0	0/1:10,0:10:11.21:11,0,129
chr10	47512904	.	CG	C	4885.23	PASS	AB=0.953;AC=43;AF=0.768;AN=56;BaseQRankSum=3.051;DP=503;FS=15.092;HRun=1;HaplotypeScore=100.9943;InbreedingCoeff=0.2462;MQ=92.28;MQ0=0;MQRankSum=-2.463;QD=11.41;ReadPosRankSum=-2.788;VQSLOD=1.4568;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:93.16:0,93,1195	1/1:6,0:6:1.12:64,1,0	0/0:29,0:29:74.24:0,74,960	0/0:15,0:15:35.48:0,35,415	1/1:15,3:18:10.51:293,11,0	0/1:19,2:21:7.24:247,0,7	0/1:23,2:25:23.90:226,0,24	1/1:1,18:19:47.85:431,48,0	1/1:18,0:17:37.55:148,38,0	1/1:17,2:19:9.72:162,10,0	0/1:10,0:10:3.72:61,0,4	1/1:24,0:24:47.82:199,48,0	1/1:18,0:18:41.08:174,41,0	1/1:24,1:25:65.28:436,65,0	0/1:16,0:16:7.54:126,0,8	0/1:4,1:5:11.92:33,0,12	1/1:21,5:26:2.04:360,2,0	1/1:12,0:12:0.68:61,1,0	1/1:9,1:10:27.23:189,27,0	1/1:11,1:12:29.66:198,30,0	1/1:24,2:26:53.41:358,53,0	1/1:19,0:19:20.93:137,21,0	1/1:17,0:17:17.91:148,18,0	1/1:19,0:19:32.12:153,32,0	0/1:15,0:15:11.86:140,0,12	1/1:14,0:14:6.37:98,6,0	1/1:22,1:23:59.34:396,59,0	0/1:11,0:11:10.62:47,0,11
chr10	47514652	.	A	AG	484.29	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.986;DP=649;FS=1.829;HRun=6;HaplotypeScore=115.8148;InbreedingCoeff=0.8405;MQ=70.02;MQ0=5;MQRankSum=-3.373;QD=22.01;ReadPosRankSum=-0.663;VQSLOD=1.9451;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:93.20:0,93,947	0/0:11,0:11:27.53:0,28,277	0/0:25,0:21:45.06:0,45,448	0/0:20,0:14:29.79:0,30,283	0/0:21,0:21:50.59:0,51,492	0/0:22,0:22:39.46:0,39,477	0/0:24,0:23:53.87:0,54,522	0/0:27,0:25:48.09:0,48,488	0/0:20,0:20:27.04:0,27,264	0/0:31,0:30:50.28:0,50,670	0/0:23,0:24:42.40:0,42,553	0/0:24,0:24:29.94:0,30,305	0/0:19,0:19:24.03:0,24,233	0/0:28,0:28:72.15:0,72,734	0/0:27,0:27:63.14:0,63,643	1/1:4,17:22:48.11:579,48,0	0/0:20,0:20:27.06:0,27,274	0/0:15,0:15:42.10:0,42,428	0/0:18,0:18:45.09:0,45,454	0/0:25,0:25:63.13:0,63,641	0/0:26,0:26:72.16:0,72,733	0/0:23,0:23:63.09:0,63,627	0/0:21,0:21:51.11:0,51,520	0/0:26,0:26:29.98:0,30,289	0/0:29,0:29:18.34:0,18,179	0/0:29,0:29:70.39:0,70,705	0/0:37,0:37:99:0,102,1040	0/0:1,0:1:3.01:0,3,31
chr10	47514674	.	G	GAGAA	9549.20	PASS	AB=1.000;AC=44;AF=0.786;AN=56;BaseQRankSum=-2.637;DP=603;FS=2.248;HRun=0;HaplotypeScore=133.8169;InbreedingCoeff=0.5607;MQ=55.58;MQ0=6;MQRankSum=-2.636;QD=18.02;ReadPosRankSum=0.827;VQSLOD=4.8669;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,102,1473	0/0:12,0:12:8.17:0,8,36	0/0:11,0:8:17.87:0,18,140	0/0:15,0:6:7.47:0,7,82	1/1:3,18:24:46.53:472,47,0	1/1:24,0:24:40.54:496,41,0	1/1:23,0:21:40.66:406,41,0	1/1:34,0:31:66.34:593,66,0	1/1:0,15:17:12.04:310,12,0	1/1:26,0:26:62.17:755,62,0	1/1:19,1:21:48.09:574,48,0	1/1:2,18:20:7.59:347,8,0	1/1:3,14:18:6.02:152,6,0	0/1:27,0:27:4.94:400,0,5	0/1:25,0:25:2.36:2,0,28	1/1:19,0:19:52.07:669,52,0	1/1:4,16:23:17.93:344,18,0	1/1:19,0:18:40.80:571,41,0	1/1:12,0:12:28.25:206,28,0	0/1:26,0:26:37.11:201,0,37	1/1:25,0:25:15.48:284,15,0	1/1:1,17:18:39.85:459,40,0	1/1:14,1:15:44.97:541,45,0	1/1:1,22:23:15:247,15,0	1/1:2,23:28:11.13:299,11,0	1/1:22,2:24:61.46:818,61,0	0/1:36,0:36:2.82:373,0,3	1/1:3,0:2:3:27,3,0
chr10	47514676	.	G	GAAA	1036.68	PASS	AB=0.985;AC=16;AF=0.286;AN=56;BaseQRankSum=5.100;DP=590;FS=2.700;HRun=1;HaplotypeScore=150.6698;InbreedingCoeff=-0.2411;MQ=54.20;MQ0=7;MQRankSum=-1.660;QD=3.35;ReadPosRankSum=5.755;VQSLOD=-0.7396;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,105,1826	0/0:14,0:14:20.62:0,21,288	0/0:9,0:6:17.96:0,18,260	0/0:14,0:4:9.03:0,9,142	0/1:24,0:24:8.49:8,0,271	0/0:24,0:24:41.83:0,42,327	0/1:23,0:21:16.69:17,0,142	0/0:33,0:30:77.34:0,77,526	1/1:20,0:20:12.50:132,12,0	0/1:25,0:25:26.92:27,0,291	0/1:21,0:21:77.31:77,0,226	0/1:20,0:20:47.18:125,0,47	0/1:14,0:14:16.92:54,0,17	0/0:28,0:28:46.77:0,47,494	0/0:25,0:25:53.85:0,54,635	0/1:14,5:19:99:174,0,110	0/1:22,0:22:29.60:129,0,30	0/1:17,0:16:34.95:35,0,73	0/0:12,0:12:22.50:0,23,195	0/0:25,0:25:50.49:0,50,483	0/0:25,0:25:48.44:0,48,452	0/1:17,0:17:99:102,0,168	0/1:16,0:16:44.85:45,0,104	0/1:22,0:21:25.58:50,0,26	0/1:26,0:26:30.18:124,0,30	0/1:23,0:23:99:100,0,225	0/0:34,0:34:35.49:0,35,624	0/0:3,0:2:2.92:0,3,17
chr10	47514710	.	AAGGCAGGC	A	5593.25	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=-10.498;DP=629;FS=1.666;HRun=0;HaplotypeScore=212.3637;InbreedingCoeff=0.0261;MQ=59.92;MQ0=6;MQRankSum=4.157;QD=17.37;ReadPosRankSum=-3.604;VQSLOD=3.8671;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,111,3471	1/1:0,11:11:20.93:330,21,0	0/0:12,0:10:30.08:0,30,512	0/0:7,0:5:14.80:0,15,164	0/0:26,0:29:63.10:0,63,1553	0/0:24,0:24:66.08:0,66,1397	0/0:23,0:21:38.90:0,39,716	1/1:40,0:39:61.57:1302,62,0	0/1:22,0:22:99:329,0,187	0/0:28,0:28:77.99:0,78,1637	0/0:15,0:16:45.04:0,45,993	0/1:24,0:24:99:502,0,289	0/1:17,0:17:99:342,0,109	0/1:30,0:30:99:437,0,621	1/1:1,15:16:3.01:72,3,0	0/0:21,0:21:29.46:0,29,753	0/0:22,0:24:51.17:0,51,1167	0/0:21,0:20:56.95:0,57,1145	0/1:19,0:18:99:371,0,187	0/1:25,0:25:99:227,0,626	0/1:26,0:26:99:233,0,532	0/1:16,0:16:99:290,0,175	0/1:16,0:16:96.37:366,0,96	0/1:24,0:23:99:307,0,181	0/0:25,0:28:39.13:0,39,861	0/0:27,0:29:81.28:0,81,2228	0/1:36,0:36:99:485,0,725	0/0:6,0:5:12.04:0,12,170
chr10	47515470	.	G	GGAA	1441.92	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=-7.385;DP=598;FS=1.510;HRun=0;HaplotypeScore=85.5133;InbreedingCoeff=0.6591;MQ=72.24;MQ0=1;MQRankSum=0.385;QD=26.22;ReadPosRankSum=-4.393;VQSLOD=2.8749;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,108,1544	0/0:6,0:6:12.02:0,12,156	0/1:21,0:19:7.89:8,0,161	0/0:22,0:21:38.45:0,38,444	0/0:16,0:16:45.11:0,45,603	0/0:23,0:23:60.20:0,60,887	0/0:16,0:16:39.10:0,39,551	1/1:7,26:34:84.25:1535,84,0	0/0:14,0:14:36.11:0,36,510	0/0:31,0:31:75.25:0,75,1089	0/0:15,0:15:36.12:0,36,530	0/0:23,0:23:54.18:0,54,801	0/0:20,0:20:57.19:0,57,845	0/0:21,0:21:54.18:0,54,798	0/0:30,0:30:84.25:0,84,1182	0/0:19,0:19:42.14:0,42,614	0/0:30,0:30:78.25:0,78,1134	0/0:23,0:23:47.31:0,47,956	0/0:21,0:21:29.91:0,30,415	0/0:26,0:26:60.20:0,60,887	0/0:23,0:23:54.18:0,54,793	0/0:10,0:10:27.08:0,27,381	0/0:11,0:11:33.09:0,33,448	0/0:24,0:24:63.20:0,63,910	0/0:16,0:16:42.13:0,42,600	0/0:31,0:31:75.25:0,75,1090	0/0:24,0:24:48.14:0,48,669	0/0:7,0:7:15.05:0,15,219
chr10	47516131	.	CT	C	839.91	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.048;DP=692;FS=1.651;HRun=2;HaplotypeScore=65.3653;InbreedingCoeff=0.9994;MQ=84.20;MQ0=0;MQRankSum=-1.923;QD=35.00;ReadPosRankSum=2.131;VQSLOD=4.1862;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,129,1907	0/0:10,0:10:30.10:0,30,450	0/0:20,0:20:51.12:0,51,736	0/0:25,0:25:72.20:0,72,1008	0/0:23,0:23:63.21:0,63,930	0/0:19,0:19:57.19:0,57,854	0/0:26,0:26:78.25:0,78,1147	0/0:27,0:27:75.21:0,75,1023	0/0:25,0:25:75.25:0,75,1124	0/0:27,0:27:78.25:0,78,1122	0/0:25,0:25:72.23:0,72,1060	0/0:25,0:25:75.25:0,75,1099	0/0:24,0:24:69.20:0,69,992	0/0:29,0:29:87.26:0,87,1263	0/0:25,0:25:75.23:0,75,1085	1/1:0,24:24:72.23:935,72,0	0/0:27,0:27:81.20:0,81,1133	0/0:23,0:23:69.19:0,69,1003	0/0:20,0:20:57.16:0,57,784	0/0:29,0:29:87.29:0,87,1298	0/0:27,0:27:81.27:0,81,1205	0/0:13,0:13:39.07:0,39,539	0/0:23,0:23:69.23:0,69,1022	0/0:35,0:35:96.26:0,96,1403	0/0:28,0:28:84.28:0,84,1241	0/0:21,0:21:63.21:0,63,944	0/0:30,0:30:90.29:0,90,1327	0/0:18,0:18:48.16:0,48,719
chr10	47516822	.	TACACACAC	T	1152.97	PASS	AB=0.748;AC=20;AF=0.385;AN=52;BaseQRankSum=3.795;DP=595;FS=4.447;HRun=0;HaplotypeScore=143.5700;InbreedingCoeff=0.3649;MQ=59.85;MQ0=17;MQRankSum=-3.800;QD=4.38;ReadPosRankSum=1.139;VQSLOD=2.6186;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:30:45.15:0,45,1138	0/0:8,0:8:2.99:0,3,24	0/0:43,0:20:3.01:0,3,44	./.	0/0:21,0:24:22.96:0,23,481	0/1:15,0:22:0.15:0,0,146	0/1:13,1:21:72.99:73,0,78	0/0:16,0:16:21.05:0,21,312	1/1:12,4:17:12.04:281,12,0	0/0:17,0:17:33.11:0,33,884	0/0:13,0:12:15.05:0,15,516	1/1:11,12:24:11.84:280,12,0	1/1:15,4:21:3.45:40,3,0	1/1:14,2:16:12.04:214,12,0	0/1:8,0:13:0.91:1,0,123	0/1:12,1:15:45.63:91,0,46	0/0:16,0:32:33.56:0,34,949	0/0:14,0:23:24.93:0,25,421	1/1:18,3:19:2.16:74,2,0	0/0:17,3:20:1.55:0,2,4	0/1:22,11:31:41.36:46,0,41	1/1:9,6:14:2.82:73,3,0	./.	0/1:19,11:28:18.55:19,0,66	0/0:13,0:20:18.06:0,18,579	0/0:20,0:20:43.94:0,44,947	1/1:13,1:13:6.49:125,6,0	0/0:4,0:9:6.02:0,6,202
chr10	47517422	.	TG	T	10274.55	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=15.124;DP=728;FS=0.575;HRun=2;HaplotypeScore=71.6592;InbreedingCoeff=0.9993;MQ=91.39;MQ0=0;MQRankSum=-6.147;QD=35.93;ReadPosRankSum=4.355;VQSLOD=5.3576;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:81.27:0,81,1206	0/0:14,0:14:39.13:0,39,585	0/0:26,0:26:69.19:0,69,972	0/0:32,0:32:69.45:0,69,1127	0/0:32,0:32:93.30:0,93,1355	0/0:25,0:25:75.24:0,75,1105	0/0:15,0:15:45.14:0,45,653	0/0:38,0:38:99:0,114,1640	1/1:0,24:24:63.20:818,63,0	0/0:22,0:22:66.21:0,66,966	0/0:23,0:23:69.23:0,69,1028	1/1:0,28:28:75.24:974,75,0	1/1:0,24:24:66.21:854,66,0	1/1:0,24:24:66.21:857,66,0	0/0:34,0:34:99:0,102,1485	0/0:22,1:23:27.26:0,27,905	0/0:41,0:41:99:0,120,1778	0/0:7,0:7:21.07:0,21,315	1/1:1,27:28:81.26:1052,81,0	1/1:0,24:24:69.22:891,69,0	1/1:1,32:33:87.28:1130,87,0	1/1:1,21:22:63.20:818,63,0	1/1:0,24:24:69.22:896,69,0	1/1:0,25:25:69.22:896,69,0	0/0:33,0:33:99:0,99,1483	0/0:31,0:31:90.30:0,90,1346	1/1:0,30:30:84.27:1090,84,0	0/0:19,0:19:57.19:0,57,854
chr10	47518828	.	CACACAA	C	1173.02	PASS	AB=0.995;AC=26;AF=0.464;AN=56;BaseQRankSum=4.272;DP=535;FS=31.354;HRun=0;HaplotypeScore=147.1568;InbreedingCoeff=-0.0314;MQ=44.68;MQ0=25;MQRankSum=-3.652;QD=3.18;ReadPosRankSum=1.455;VQSLOD=1.2159;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:38,0:38:11.34:11,0,1097	0/1:6,0:5:1:10,0,1	0/0:26,0:6:0.80:0,1,64	0/0:31,0:2:5.77:0,6,31	0/0:9,0:9:8.14:0,8,76	0/1:20,0:19:15.77:16,0,552	0/0:32,0:31:34.42:0,34,853	0/0:26,0:25:48.92:0,49,568	1/1:15,0:14:5.59:101,6,0	0/0:15,0:15:29.99:0,30,487	0/1:10,0:10:14.64:15,0,172	1/1:21,1:20:19.23:217,19,0	0/1:23,1:24:37.16:296,0,37	1/1:13,1:11:0.29:15,0,0	1/1:22,0:22:2.13:20,2,0	1/1:21,0:21:12:104,12,0	0/1:19,0:17:60.19:60,0,216	0/1:11,0:9:16.68:17,0,237	0/1:18,0:15:55.58:56,0,132	0/1:14,0:14:5.85:15,0,6	0/1:22,0:21:3.67:4,0,66	0/1:14,0:14:1.94:18,0,2	0/1:14,0:14:11.87:12,0,18	0/1:31,1:32:10.22:34,0,10	0/1:15,0:14:4.60:5,0,143	0/0:19,0:18:25.86:0,26,749	1/1:17,1:18:30.81:311,31,0	0/0:8,0:8:1.60:0,2,352
chr10	47518830	.	CACAA	C	854.59	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=4.373;DP=544;FS=17.657;HRun=0;HaplotypeScore=142.7522;InbreedingCoeff=-0.1343;MQ=45.16;MQ0=24;MQRankSum=-1.591;QD=2.14;ReadPosRankSum=0.854;VQSLOD=1.6647;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:38,0:38:31.32:31,0,823	1/1:5,0:4:5.80:31,6,0	0/0:26,0:6:0.54:0,1,63	0/0:31,0:2:5.80:0,6,32	0/0:9,0:9:8.14:0,8,91	0/1:21,0:20:23.33:23,0,426	0/0:32,0:31:34.56:0,35,722	0/0:28,0:27:51.42:0,51,568	1/1:15,0:14:11.16:56,11,0	0/1:14,0:14:7.76:8,0,253	0/1:9,0:9:14.83:15,0,124	1/1:22,0:20:18.49:118,18,0	0/1:25,0:25:37.81:119,0,38	1/1:15,0:12:2.97:39,3,0	1/1:21,1:22:2.13:20,2,0	1/1:8,13:21:12.05:116,12,0	0/1:21,0:19:68.85:69,0,170	0/1:12,0:10:31.03:31,0,158	0/1:19,0:16:24.39:24,0,202	0/1:14,0:14:5.22:15,0,5	0/1:23,0:22:24.29:24,0,64	0/1:15,0:15:2.12:18,0,2	0/1:14,0:14:11.50:12,0,17	0/1:32,0:32:9.82:34,0,10	0/1:15,0:15:27.55:28,0,91	0/0:19,0:18:25.57:0,26,582	1/1:19,0:19:28.91:175,29,0	0/1:8,0:8:16.30:16,0,230
chr10	47518834	.	AACACAC	A	1570.13	PASS	AB=0.815;AC=24;AF=0.462;AN=52;BaseQRankSum=5.920;DP=536;FS=0.000;HRun=0;HaplotypeScore=147.2459;InbreedingCoeff=0.7233;MQ=45.99;MQ0=27;MQRankSum=-6.923;QD=6.21;ReadPosRankSum=-3.902;VQSLOD=1.2903;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:49.85:0,50,1283	0/0:4,0:3:2.22:0,2,7	./.	./.	0/0:6,0:11:6.46:0,6,78	0/0:20,0:20:23.09:0,23,600	0/0:29,0:28:36.09:0,36,801	0/0:27,0:25:29.95:0,30,327	0/1:7,10:16:5.02:166,0,5	0/0:4,0:12:27:0,27,534	0/0:7,0:9:8.11:0,8,222	1/1:9,13:22:4.68:215,5,0	1/1:10,14:26:23.36:419,23,0	1/1:10,4:12:9.17:71,9,0	0/1:22,0:22:0:0,0,0	1/1:19,0:19:5.51:29,6,0	0/0:20,0:19:11.61:0,12,260	0/0:10,0:8:11.83:0,12,243	1/1:14,1:15:16.75:151,17,0	1/1:5,6:12:11.72:83,12,0	1/1:20,0:19:3.13:52,3,0	1/1:5,10:15:15.37:102,15,0	1/1:6,7:13:7.80:45,8,0	1/1:18,15:33:5.24:40,5,0	0/0:14,0:14:3.99:0,4,155	0/0:17,0:17:38.76:0,39,730	1/1:6,9:18:24.06:384,24,0	0/0:10,0:9:21.03:0,21,405
chr10	47519061	.	CAAT	C	709.70	PASS	AB=1.000;AC=25;AF=0.833;AN=30;BaseQRankSum=-0.835;DP=190;FS=0.000;HRun=0;HaplotypeScore=39.2831;InbreedingCoeff=0.2748;MQ=72.05;MQ0=0;MQRankSum=-0.449;QD=5.77;ReadPosRankSum=-0.064;VQSLOD=0.9970;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	./.	0/0:1,0:2:3.01:0,3,39	./.	0/1:21,0:21:0:0,0,0	1/1:3,0:4:2.98:21,3,0	1/1:5,2:8:9:99,9,0	./.	./.	1/1:4,0:6:5.95:42,6,0	1/1:7,0:9:4.53:25,5,0	1/1:2,0:3:2.98:21,3,0	./.	1/1:18,6:24:18.06:235,18,0	1/1:11,1:12:8.99:98,9,0	0/0:10,0:9:0:0,0,0	1/1:6,0:8:2.92:17,3,0	./.	./.	./.	./.	1/1:8,1:10:5.99:60,6,0	1/1:4,2:6:6.02:78,6,0	1/1:8,0:9:2.98:21,3,0	1/1:1,2:3:6.02:78,6,0
chr10	47519116	.	TA	T	5482.52	PASS	AB=0.667;AC=47;AF=0.870;AN=54;BaseQRankSum=3.902;DP=245;FS=0.000;HRun=7;HaplotypeScore=48.8106;InbreedingCoeff=0.7396;MQ=65.36;MQ0=0;MQRankSum=-4.350;QD=25.27;ReadPosRankSum=3.353;VQSLOD=5.0348;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:30.07:0,30,351	1/1:0,3:3:6.01:61,6,0	0/0:10,0:8:21.06:0,21,258	0/0:6,0:5:6.01:0,6,62	1/1:0,5:5:15.03:153,15,0	1/1:0,6:6:15.03:153,15,0	1/1:0,4:4:6.01:61,6,0	1/1:10,23:33:75.14:757,75,0	1/1:0,6:6:15.03:153,15,0	1/1:1,7:8:21.03:207,21,0	1/1:0,6:6:12.02:122,12,0	1/1:0,4:4:12.03:122,12,0	1/1:0,7:7:18.04:183,18,0	1/1:1,4:5:15.02:146,15,0	1/1:0,5:5:9.02:92,9,0	1/1:0,8:8:24.05:245,24,0	1/1:2,23:25:66.15:673,66,0	1/1:0,10:10:27.06:275,27,0	1/1:5,11:16:36.07:364,36,0	1/1:0,10:10:27.06:275,27,0	0/1:1,1:2:0:0,0,0	1/1:0,2:2:3.01:31,3,0	1/1:0,6:6:12.03:122,12,0	./.	1/1:0,13:13:36.08:367,36,0	1/1:0,4:4:12.03:122,12,0	1/1:0,9:9:27.06:275,27,0	1/1:1,19:20:51.12:520,51,0
chr10	47519132	.	G	GA	3794.39	PASS	AB=1.000;AC=25;AF=0.446;AN=56;BaseQRankSum=4.925;DP=299;FS=6.243;HRun=8;HaplotypeScore=65.9646;InbreedingCoeff=0.8283;MQ=69.80;MQ0=0;MQRankSum=-7.322;QD=28.11;ReadPosRankSum=-3.790;VQSLOD=2.6478;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:39.02:0,39,357	0/0:4,0:4:6:0,6,55	0/1:6,0:8:12.07:12,0,118	0/0:4,0:4:8.84:0,9,66	0/0:10,0:10:30.02:0,30,274	0/0:5,0:5:12:0,12,110	0/0:6,0:6:12.01:0,12,110	1/1:2,28:31:87.16:972,87,0	1/1:1,7:8:21.06:242,21,0	0/0:12,0:12:33.02:0,33,302	0/0:8,0:8:24.01:0,24,220	1/1:0,8:8:21.06:242,21,0	1/1:1,9:10:23.81:277,24,0	1/1:0,6:6:18.05:208,18,0	0/0:7,0:7:17.99:0,18,165	0/0:11,1:12:1.40:0,1,267	0/0:25,0:25:63.03:0,63,577	0/0:12,0:12:27.01:0,27,247	1/1:4,11:15:33.09:372,33,0	1/1:0,14:14:42.12:483,42,0	1/1:0,5:5:11.99:124,12,0	1/1:0,4:4:12.03:136,12,0	1/1:0,7:7:18.05:208,18,0	1/1:0,4:4:3.01:35,3,0	0/0:16,0:16:42.02:0,42,384	0/0:5,0:5:12:0,12,110	1/1:1,14:15:42.12:484,42,0	0/0:25,0:25:69.04:0,69,632
chr10	47519610	.	CT	C	10590.11	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=8.958;DP=668;FS=1.526;HRun=10;HaplotypeScore=70.2375;InbreedingCoeff=0.9917;MQ=71.00;MQ0=0;MQRankSum=0.563;QD=21.97;ReadPosRankSum=2.041;VQSLOD=5.8288;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:78.21:0,78,863	1/1:3,8:11:23.99:208,24,0	0/0:14,0:13:15.78:0,16,174	0/0:10,2:11:11.71:0,12,109	1/1:5,26:31:77.97:677,78,0	1/1:0,21:21:62.99:547,63,0	1/1:2,18:20:47.99:416,48,0	1/1:3,32:35:95.96:830,96,0	1/1:2,16:18:44.99:391,45,0	1/1:5,24:29:54.41:605,54,0	1/1:0,25:25:65.97:573,66,0	1/1:3,19:22:53.98:469,54,0	1/1:2,21:23:56.98:495,57,0	0/0:21,0:22:54.12:0,54,582	1/1:3,21:24:59.98:521,60,0	1/1:2,23:25:68.98:599,69,0	1/1:0,33:33:83.98:729,84,0	1/1:1,20:21:56.99:495,57,0	0/0:27,0:27:69.18:0,69,756	0/0:31,1:34:66.86:0,67,931	0/0:24,0:24:69.17:0,69,754	1/1:2,19:21:53.97:468,54,0	1/1:9,22:31:65.88:562,66,0	1/1:2,10:12:29.99:260,30,0	1/1:1,35:36:92.98:807,93,0	1/1:4,26:31:51.91:625,52,0	0/0:25,0:25:43.48:0,43,693	1/1:1,12:13:35.99:313,36,0
chr10	47519987	.	TC	T	1725.72	PASS	AB=0.725;AC=3;AF=0.058;AN=52;BaseQRankSum=5.424;DP=1074;FS=3.318;HRun=1;HaplotypeScore=59.4211;InbreedingCoeff=0.5282;MQ=32.80;MQ0=293;MQRankSum=3.924;QD=13.38;ReadPosRankSum=3.056;VQSLOD=2.9537;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:10:18.06:0,18,287	0/1:18,11:15:33.04:153,0,33	./.	./.	0/0:37,0:24:32.79:0,33,525	0/0:42,0:24:37.96:0,38,597	0/0:67,0:36:61.72:0,62,1007	0/0:21,0:5:15.05:0,15,234	0/0:36,0:21:42.04:0,42,669	0/0:49,0:21:34.07:0,34,759	0/0:33,0:23:18.85:0,19,289	0/0:31,0:13:27.09:0,27,431	0/0:30,0:16:36.12:0,36,571	0/0:35,0:19:48.16:0,48,766	1/1:27,73:65:99:1678,120,0	0/0:36,0:17:39.12:0,39,595	0/0:71,0:49:72.12:0,72,1226	0/0:45,0:31:21.09:0,21,593	0/0:32,0:8:21.07:0,21,327	0/0:20,0:8:18.05:0,18,264	0/0:46,0:16:12.04:0,12,192	0/0:30,0:14:15.05:0,15,239	0/0:21,0:10:2.62:0,3,48	0/0:40,0:22:57.13:0,57,880	0/0:50,0:22:33.46:0,33,391	0/0:39,0:12:36.10:0,36,546	0/0:22,0:8:21.07:0,21,329	0/0:11,0:7:15.88:0,16,241
chr10	47520046	.	G	GC	372.72	PASS	AB=0.803;AC=10;AF=0.192;AN=52;BaseQRankSum=2.786;DP=656;FS=19.197;HRun=0;HaplotypeScore=49.6056;InbreedingCoeff=0.0777;MQ=37.81;MQ0=127;MQRankSum=-1.731;QD=2.18;ReadPosRankSum=-1.121;VQSLOD=0.5646;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:12:15.05:0,15,210	0/0:13,0:8:18.04:0,18,233	./.	./.	0/1:25,7:24:99:131,0,217	0/0:33,1:24:35.98:0,36,592	0/0:42,0:34:79.36:0,79,1025	0/0:21,0:8:21.05:0,21,274	0/1:15,7:18:23.70:24,0,203	0/0:34,0:23:56.02:0,56,813	1/1:14,1:10:6.01:74,6,0	0/0:13,1:9:12.03:0,12,151	0/1:10,5:11:29.72:30,0,147	0/0:16,6:19:27.01:0,27,334	0/0:61,0:49:99:0,114,1539	1/1:24,0:15:1.71:25,2,0	0/0:39,0:33:51.83:0,52,1022	0/0:37,1:25:9.28:0,9,682	0/0:7,0:1:3.01:0,3,41	0/0:11,0:8:6.02:0,6,84	0/0:25,0:14:11.34:0,11,134	0/0:13,0:9:6.02:0,6,84	0/0:5,0:5:3.01:0,3,42	0/1:14,7:13:26.62:27,0,211	0/0:19,0:11:15.05:0,15,210	0/1:19,8:17:99:192,0,412	0/0:8,3:8:11.94:0,12,108	0/1:13,0:11:3.91:4,0,230
chr10	47520047	.	T	TC	434.11	PASS	AC=2;AF=0.038;AN=52;BaseQRankSum=-0.541;DP=651;FS=5.934;HRun=0;HaplotypeScore=46.4198;InbreedingCoeff=0.3761;MQ=37.91;MQ0=126;MQRankSum=-0.284;QD=18.09;ReadPosRankSum=3.114;VQSLOD=5.4770;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:12:18.02:0,18,230	0/0:13,0:8:18.05:0,18,235	./.	./.	0/0:32,0:23:1.29:0,1,242	0/0:25,11:24:3.35:0,3,579	0/0:37,3:34:33.18:0,33,976	0/0:22,0:8:21.04:0,21,273	0/0:22,0:18:15.84:0,16,240	0/0:31,2:22:12.29:0,12,736	0/0:14,1:10:4.79:0,5,26	0/0:13,0:8:12.03:0,12,151	0/0:15,0:11:2.88:0,3,131	0/0:21,1:19:27.05:0,27,340	0/0:62,0:50:99:0,120,1584	1/1:1,23:15:33.11:527,33,0	0/0:38,1:33:81.17:0,81,1060	0/0:36,1:25:50.25:0,50,725	0/0:7,0:1:3.01:0,3,42	0/0:10,0:7:6.02:0,6,84	0/0:24,1:14:14.95:0,15,165	0/0:14,0:10:6.02:0,6,84	0/0:5,0:5:5.95:0,6,60	0/0:21,0:13:10.83:0,11,220	0/0:19,0:11:18.02:0,18,230	0/0:28,0:17:37.55:0,38,474	0/0:11,0:8:11.96:0,12,111	0/0:13,0:11:23.96:0,24,292
chr10	47520774	.	T	TA	384.03	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-4.163;DP=597;FS=10.845;HRun=9;HaplotypeScore=61.0644;InbreedingCoeff=0.9180;MQ=81.65;MQ0=0;MQRankSum=-1.830;QD=21.34;ReadPosRankSum=0.356;VQSLOD=3.7133;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:28:71:0,71,605	0/0:12,0:12:26.99:0,27,234	0/0:21,0:20:31.02:0,31,243	0/0:15,0:16:6.97:0,7,191	0/0:33,0:33:77.83:0,78,666	0/0:25,0:25:59.98:0,60,521	0/0:17,0:17:44.94:0,45,379	0/0:22,0:23:53:0,53,446	0/0:22,0:22:50.96:0,51,438	0/0:21,0:21:53.97:0,54,465	0/0:20,0:20:50.97:0,51,443	0/0:23,0:23:62.97:0,63,543	0/0:22,0:22:62.98:0,63,547	0/0:14,0:14:38.98:0,39,336	0/0:21,0:21:47.07:0,47,384	1/1:2,15:18:44.95:479,45,0	0/0:22,0:22:56.95:0,57,489	0/0:17,0:17:44.99:0,45,391	0/0:21,0:21:47.94:0,48,411	0/0:28,0:28:71.95:0,72,621	0/0:23,0:23:34.72:0,35,466	0/0:24,0:24:62.94:0,63,535	0/0:27,0:27:65.98:0,66,573	0/0:14,0:14:35.97:0,36,312	0/0:18,0:18:41.97:0,42,365	0/0:22,0:21:53.99:0,54,469	0/0:30,0:30:80.93:0,81,694	0/0:15,0:15:35.94:0,36,307
chr10	47520936	.	TA	T	666.22	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=4.334;DP=573;FS=7.599;HRun=2;HaplotypeScore=58.9347;InbreedingCoeff=0.9420;MQ=84.96;MQ0=0;MQRankSum=-0.380;QD=31.72;ReadPosRankSum=1.348;VQSLOD=2.8995;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,108,1561	1/1:0,2:2:6.02:78,6,0	0/0:20,0:20:51.07:0,51,678	0/0:18,0:18:48.11:0,48,637	0/0:30,0:30:81.19:0,81,1177	0/0:24,0:24:72.24:0,72,1072	0/0:28,0:28:81.27:0,81,1214	0/0:37,0:37:99:0,111,1645	0/0:23,0:23:66.22:0,66,988	0/0:10,0:10:27.09:0,27,405	0/0:13,0:13:33.11:0,33,492	0/0:21,0:21:63.21:0,63,944	0/0:16,0:16:48.13:0,48,660	0/0:15,0:15:45.13:0,45,620	1/1:0,19:19:54.18:700,54,0	0/0:10,0:10:30.10:0,30,449	0/0:27,0:27:78.19:0,78,1101	0/0:14,0:14:39.09:0,39,559	0/0:14,0:14:39.12:0,39,554	0/0:20,0:20:57.18:0,57,831	0/0:10,0:10:27.07:0,27,384	0/0:20,0:20:60.18:0,60,853	0/0:19,0:19:54.05:0,54,716	0/0:33,0:33:99:0,99,1452	0/0:14,0:14:42.07:0,42,601	0/0:23,0:23:69.20:0,69,978	0/0:25,0:25:75.25:0,75,1124	0/0:32,0:32:90.30:0,90,1346
chr10	47521256	.	AAAAAAAAAAAAC	A	2688.97	PASS	AB=0.936;AC=15;AF=0.268;AN=56;BaseQRankSum=0.634;DP=581;FS=13.333;HRun=0;HaplotypeScore=183.3469;InbreedingCoeff=0.2852;MQ=50.01;MQ0=26;MQRankSum=1.794;QD=12.11;ReadPosRankSum=-2.490;VQSLOD=1.5633;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:38:99:0,102,3305	0/0:3,0:2:6.02:0,6,144	0/0:25,0:4:8.75:0,9,91	0/0:22,0:7:6.02:0,6,209	0/0:42,0:40:99:0,100,2250	0/0:18,0:18:54.18:0,54,1080	0/0:16,0:15:11.78:0,12,171	0/0:18,0:14:12.24:0,12,435	0/1:17,0:16:92.77:93,0,142	0/0:23,0:22:31.94:0,32,1161	0/0:19,0:19:48.16:0,48,1055	0/1:13,0:13:43.33:43,0,64	0/1:14,0:14:33.51:92,0,34	1/1:17,3:19:16.66:402,17,0	0/0:3,0:2:6.02:0,6,189	0/0:17,0:17:15.05:0,15,231	0/0:20,0:18:50.23:0,50,941	0/0:14,0:13:33.06:0,33,644	1/1:21,3:17:5.16:429,5,0	1/1:8,14:21:16.44:247,16,0	0/1:4,18:22:11.85:167,0,12	0/1:22,0:21:99:202,0,108	0/1:18,0:17:16.78:199,0,17	0/1:28,0:27:99:372,0,101	0/0:22,0:21:21.52:0,22,1532	0/0:28,0:27:56.38:0,56,1634	1/1:20,2:21:44.53:619,45,0	0/0:28,0:27:61.51:0,62,1130
chr10	47521258	.	AAAAAAAAAACAAC	A	2621.54	PASS	AB=0.932;AC=15;AF=0.268;AN=56;BaseQRankSum=0.595;DP=568;FS=0.000;HRun=0;HaplotypeScore=188.0034;InbreedingCoeff=-0.0992;MQ=47.86;MQ0=25;MQRankSum=1.820;QD=9.57;ReadPosRankSum=-1.862;VQSLOD=2.4427;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:40:99:0,106,3264	0/0:3,0:2:6.02:0,6,117	0/0:23,0:3:8.69:0,9,111	0/0:22,0:7:9.03:0,9,257	0/0:43,0:41:35.76:0,36,1683	0/0:18,0:18:54.08:0,54,873	0/0:16,0:15:9.17:0,9,91	0/1:19,0:15:56.54:57,0,269	0/1:16,0:15:22.86:223,0,23	0/1:24,0:23:90.70:91,0,872	0/0:20,0:20:12.71:0,13,796	0/1:15,0:15:15.32:47,0,15	0/1:3,11:14:27.42:135,0,27	0/1:18,0:17:8.56:182,0,9	0/0:3,0:2:6.02:0,6,170	0/0:17,0:17:14.95:0,15,159	0/0:20,0:18:49.12:0,49,783	0/0:14,0:13:29.53:0,30,498	0/1:20,0:13:31.75:203,0,32	0/1:17,0:16:3.92:99,0,4	0/1:20,0:20:3.11:100,0,3	0/1:8,14:21:27.97:443,0,28	0/1:17,1:17:10.73:230,0,11	1/1:27,2:28:38.66:710,39,0	0/1:22,0:21:18.29:18,0,1293	0/0:28,0:27:36.44:0,36,1328	0/1:20,0:19:11.88:244,0,12	0/0:24,0:24:53.06:0,53,836
chr10	47521259	.	AAAAAAAAACAAC	A	3467.15	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=-1.355;DP=562;FS=0.473;HRun=0;HaplotypeScore=175.4712;InbreedingCoeff=0.3632;MQ=46.56;MQ0=25;MQRankSum=4.118;QD=12.25;ReadPosRankSum=-2.742;VQSLOD=2.1375;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:40:99:0,102,2952	0/0:3,0:2:6.02:0,6,96	0/0:23,0:3:8.37:0,8,85	0/0:21,0:6:9.03:0,9,230	0/0:42,0:41:23.16:0,23,1465	0/0:19,0:19:7.59:0,8,625	0/0:16,0:15:0.93:0,1,88	0/1:19,0:15:61.48:61,0,231	1/1:16,0:15:9.30:316,9,0	0/1:24,0:23:99:103,0,740	0/0:20,0:20:12.61:0,13,672	1/1:4,11:15:2.67:75,3,0	1/1:14,0:14:5.49:154,5,0	1/1:15,0:14:11.36:258,11,0	0/0:3,0:2:5.93:0,6,137	0/0:17,0:17:13.77:0,14,115	0/0:20,0:18:48.39:0,48,614	0/1:14,0:13:12.50:12,0,374	0/1:19,0:12:11.04:258,0,11	1/1:16,0:15:7.38:142,7,0	0/1:19,0:20:4.52:132,0,5	0/1:22,0:21:2.77:438,0,3	1/1:5,13:17:5.56:269,6,0	1/1:27,2:28:39.98:801,40,0	0/1:23,0:22:56.68:57,0,1081	0/0:28,0:27:36.10:0,36,1081	1/1:19,0:18:29.70:389,30,0	0/0:23,0:23:48.11:0,48,704
chr10	47521264	.	A	AC	367.13	PASS	AB=0.976;AC=11;AF=0.196;AN=56;BaseQRankSum=1.376;DP=542;FS=46.939;HRun=0;HaplotypeScore=107.6304;InbreedingCoeff=-0.2731;MQ=48.23;MQ0=24;MQRankSum=-1.653;QD=1.44;ReadPosRankSum=4.333;VQSLOD=0.1840;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:41:97.98:0,98,725	0/0:3,0:2:5.96:0,6,44	0/1:22,0:6:12.93:13,0,43	0/0:19,0:7:8.85:0,9,65	0/1:43,0:41:23.43:23,0,229	0/1:19,0:19:10.09:10,0,193	0/0:16,0:15:9.03:0,9,48	0/0:19,0:15:23.07:0,23,161	0/0:13,0:12:30.89:0,31,240	0/1:27,0:26:22.40:22,0,189	0/1:21,0:21:22.98:23,0,133	0/0:12,0:12:2.96:0,3,19	0/0:13,0:13:4.61:0,5,26	0/0:13,0:12:25.96:0,26,166	0/0:4,0:3:8.97:0,9,73	0/0:17,0:17:8.90:0,9,61	0/1:20,0:18:33.73:34,0,110	0/1:13,0:12:20.07:20,0,85	0/0:18,0:11:26.52:0,27,172	0/0:15,0:14:17.49:0,17,110	0/1:20,0:20:17.51:18,0,19	0/0:19,0:18:26.04:0,26,160	0/0:18,0:17:13.50:0,14,65	0/0:27,0:26:53.13:0,53,388	0/1:25,0:24:61.70:182,0,62	0/1:19,11:29:99:123,0,171	0/0:17,0:16:25.84:0,26,283	0/1:15,0:15:42.48:42,0,94
chr10	47521270	.	AC	A	3075.15	PASS	AB=1.000;AC=37;AF=0.661;AN=56;BaseQRankSum=5.751;DP=515;FS=27.642;HRun=1;HaplotypeScore=99.4875;InbreedingCoeff=0.7378;MQ=50.62;MQ0=21;MQRankSum=-4.159;QD=8.47;ReadPosRankSum=-1.518;VQSLOD=-0.6317;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:30:59.72:0,60,1044	0/1:2,0:1:0:0,0,0	0/0:14,1:8:18.10:0,18,209	0/0:18,0:12:27.08:0,27,385	1/1:42,1:41:60.14:412,60,0	1/1:17,0:17:37.25:191,37,0	1/1:15,0:15:7.39:38,7,0	1/1:17,0:13:20.68:153,21,0	1/1:14,0:13:32.86:263,33,0	1/1:25,2:26:51.06:291,51,0	1/1:20,1:21:37.06:221,37,0	1/1:12,0:12:2.97:20,3,0	0/1:13,0:13:0.44:0,0,44	0/0:14,0:13:2.41:0,2,104	1/1:6,0:5:11.79:82,12,0	1/1:16,0:16:5.90:40,6,0	1/1:19,0:17:35.73:208,36,0	1/1:13,2:14:22.77:130,23,0	0/0:18,1:12:19.28:0,19,148	0/0:15,0:14:13.56:0,14,71	0/0:21,0:21:11.26:0,11,90	1/1:19,0:18:6:177,6,0	0/1:16,0:15:18.42:18,0,35	1/1:25,0:24:26.91:294,27,0	1/1:26,0:25:53.28:287,53,0	1/1:33,0:32:64.45:399,64,0	0/0:17,0:16:25.60:0,26,219	1/1:7,0:7:13.07:44,13,0
chr10	47522109	.	G	GTT	507.94	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-1.829;DP=693;FS=1.977;HRun=9;HaplotypeScore=80.9954;InbreedingCoeff=0.9547;MQ=71.50;MQ0=0;MQRankSum=-0.436;QD=25.40;ReadPosRankSum=0.545;VQSLOD=3.5634;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,120,1260	0/0:15,0:15:36.08:0,36,383	0/0:14,0:15:10.09:0,10,103	0/0:12,0:13:30.06:0,30,318	0/0:30,0:30:75.14:0,75,790	0/0:14,0:14:36.05:0,36,367	0/0:24,0:24:60.14:0,60,639	0/0:30,0:30:75.10:0,75,781	0/0:25,0:26:71.90:0,72,746	0/0:16,0:16:42.10:0,42,447	0/0:19,0:19:42.07:0,42,437	0/0:32,0:32:84.20:0,84,894	0/0:21,0:21:54.09:0,54,566	0/0:32,0:33:92.96:0,93,969	0/0:26,0:26:69.14:0,69,726	1/1:4,14:20:44.37:603,44,0	0/0:20,0:20:57.14:0,57,607	0/0:32,0:32:84.06:0,84,854	0/0:20,0:20:51.10:0,51,543	0/0:34,0:36:69.03:0,69,829	0/0:19,0:20:53.84:0,54,545	0/0:22,0:23:61.92:0,62,624	0/0:17,0:17:48.12:0,48,511	0/0:21,0:21:60.15:0,60,639	0/0:40,0:40:99:0,108,1132	0/0:35,0:35:93.21:0,93,984	0/0:37,0:36:93.18:0,93,989	0/0:13,0:13:36.09:0,36,383
chr10	47524172	.	C	CAGAG	470.67	PASS	AB=0.868;AC=17;AF=0.327;AN=52;BaseQRankSum=-0.866;DP=544;FS=27.785;HRun=0;HaplotypeScore=100.3519;InbreedingCoeff=0.1770;MQ=75.28;MQ0=10;MQRankSum=-1.514;QD=1.99;ReadPosRankSum=-2.322;VQSLOD=-0.0189;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:34:9.01:0,9,84	./.	./.	0/0:50,0:29:0:0,0,0	1/1:20,0:19:2.74:12,3,0	0/0:23,0:23:2.57:0,3,35	0/1:14,0:20:13.38:13,0,81	1/1:30,0:30:9.55:101,10,0	0/0:10,0:13:17.62:0,18,184	0/1:23,0:23:19.44:91,0,19	0/1:11,0:13:3.42:3,0,84	0/0:24,0:23:20.19:0,20,316	0/0:9,0:10:3:0,3,28	0/0:10,0:16:3:0,3,28	0/0:16,0:20:9.48:0,9,85	0/1:14,5:19:37.18:132,0,37	1/1:16,0:21:5.74:37,6,0	0/1:15,0:29:8.43:53,0,8	0/0:9,0:11:6.01:0,6,56	0/0:7,0:10:3:0,3,28	0/0:12,0:12:0.47:0,0,1	0/1:20,0:21:6.41:6,0,40	0/0:20,0:20:12.01:0,12,144	0/0:18,0:19:15.03:0,15,194	0/1:13,0:14:21.91:36,0,22	1/1:18,0:17:8.94:68,9,0	0/0:11,0:15:6.01:0,6,56	1/1:9,0:9:6.02:66,6,0
chr10	47525803	.	C	CAG	409.47	PASS	AB=0.988;AC=26;AF=0.542;AN=48;BaseQRankSum=2.355;DP=449;FS=17.177;HRun=0;HaplotypeScore=100.1683;InbreedingCoeff=0.2357;MQ=75.30;MQ0=9;MQRankSum=-1.665;QD=1.79;ReadPosRankSum=-3.005;VQSLOD=-0.1868;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:26:63.18:0,63,798	./.	0/0:44,0:24:18.57:0,19,269	0/0:67,1:34:42.63:0,43,513	1/1:15,0:14:3.47:26,3,0	1/1:16,0:15:3.01:33,3,0	0/1:12,0:12:5.20:13,0,5	1/1:19,0:18:2.50:11,2,0	1/1:14,0:14:1.18:22,1,0	0/1:16,2:18:24.07:205,0,24	0/0:9,0:8:2.06:0,2,10	0/0:13,0:13:0.29:0,0,1	./.	0/0:18,1:19:1.80:0,2,14	1/1:20,1:21:3:25,3,0	0/1:10,0:10:5.54:6,0,49	./.	1/1:12,1:13:5.78:51,6,0	0/0:7,0:7:0.47:0,0,1	0/1:7,0:7:0:0,0,0	1/1:11,1:12:0.47:1,0,0	./.	1/1:13,0:13:3.88:26,4,0	0/1:19,0:20:12.38:18,0,12	0/1:4,0:4:0:0,0,0	0/1:16,0:14:0.59:26,0,1	1/1:12,0:11:8.98:73,9,0	0/1:5,0:5:0.06:0,0,0
chr10	47525807	.	GAGAGAC	G	1819.67	PASS	AB=1.000;AC=31;AF=0.574;AN=54;BaseQRankSum=-1.634;DP=432;FS=23.864;HRun=0;HaplotypeScore=109.9725;InbreedingCoeff=0.1465;MQ=70.84;MQ0=10;MQRankSum=-2.860;QD=6.89;ReadPosRankSum=-1.314;VQSLOD=-0.1709;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:26:63.16:0,63,1695	./.	0/0:40,0:20:31.59:0,32,273	0/0:64,0:30:34.35:0,34,448	1/1:18,0:17:8.99:75,9,0	0/1:18,0:17:38.15:41,0,38	1/1:12,0:12:15.42:234,15,0	1/1:3,13:15:33.05:521,33,0	1/1:12,0:12:14.82:115,15,0	0/1:18,0:18:99:103,0,230	0/1:10,0:9:60.32:60,0,61	1/1:13,0:13:0.41:42,0,0	1/1:4,0:4:8.99:75,9,0	1/1:22,0:22:15.81:125,16,0	1/1:21,0:20:8.99:75,9,0	0/1:11,0:11:63.45:63,0,69	1/1:13,0:12:2.94:18,3,0	0/1:10,0:10:49.83:64,0,50	0/0:5,0:3:2.59:0,3,24	0/1:7,0:7:0.02:0,0,0	0/0:12,0:12:2.39:0,2,39	0/0:14,0:13:0.40:0,0,1	0/1:11,0:11:30.16:78,0,30	0/1:17,0:16:19.07:54,0,19	0/0:4,0:4:3.01:0,3,64	0/1:15,0:13:23.06:116,0,23	1/1:11,0:10:8.99:75,9,0	1/1:5,0:5:7.40:51,7,0
chr10	47525811	.	GAC	G	2060.18	PASS	AB=0.836;AC=43;AF=0.796;AN=54;BaseQRankSum=0.515;DP=421;FS=33.331;HRun=0;HaplotypeScore=92.2074;InbreedingCoeff=0.4699;MQ=67.92;MQ0=11;MQRankSum=-2.359;QD=7.15;ReadPosRankSum=-2.466;VQSLOD=1.1943;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:26:49.15:0,49,1013	./.	0/0:36,0:16:24.61:0,25,246	0/0:63,0:29:37.63:0,38,357	1/1:14,3:16:11.98:99,12,0	1/1:15,3:17:9.88:77,10,0	1/1:11,4:15:17.93:143,18,0	1/1:15,0:14:30.22:212,30,0	1/1:12,0:12:14.86:115,15,0	0/1:15,0:15:31.25:147,0,31	1/1:11,0:10:3.29:96,3,0	1/1:13,0:13:14.59:123,15,0	1/1:4,0:4:8.99:75,9,0	1/1:20,0:20:18.05:189,18,0	1/1:15,4:18:8.99:75,9,0	0/1:9,1:10:23.79:79,0,24	1/1:4,9:12:2.94:18,3,0	1/1:10,0:10:23.15:171,23,0	1/1:4,0:2:5.93:40,6,0	1/1:7,0:7:2.92:17,3,0	1/1:12,0:11:4.35:29,4,0	0/1:5,10:14:0:0,0,0	1/1:9,0:9:12:71,12,0	1/1:17,1:17:0.53:89,1,0	0/0:5,0:5:2.88:0,3,15	1/1:12,2:12:25.45:207,25,0	1/1:8,2:9:8.98:73,9,0	1/1:7,0:5:11.09:73,11,0
chr10	47525825	.	GAGAC	G	1221.32	PASS	AB=1.000;AC=30;AF=0.556;AN=54;BaseQRankSum=0.055;DP=357;FS=5.604;HRun=0;HaplotypeScore=91.7095;InbreedingCoeff=0.1793;MQ=59.18;MQ0=12;MQRankSum=-0.757;QD=5.22;ReadPosRankSum=-3.881;VQSLOD=0.3279;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:20:54.13:0,54,1161	./.	0/1:19,0:6:2.98:5,0,3	0/0:40,0:16:8.07:0,8,80	1/1:18,0:17:11.97:98,12,0	0/0:13,3:15:2.98:0,3,22	1/1:12,4:16:20.94:205,21,0	1/1:25,0:23:31.94:203,32,0	0/1:8,0:8:0:0,0,0	0/1:11,0:11:51.82:52,0,132	0/1:10,0:8:26.26:42,0,26	1/1:10,0:10:5.29:49,5,0	1/1:3,0:3:3.88:27,4,0	0/1:15,0:15:5.38:43,0,5	1/1:16,0:15:5.99:50,6,0	0/1:8,0:8:43.30:43,0,62	1/1:13,0:12:3:25,3,0	0/1:10,0:10:16.88:114,0,17	0/0:5,0:3:1.18:0,1,15	0/0:8,0:8:0.89:0,1,2	0/0:14,0:13:1.22:0,1,13	0/0:11,0:10:0.47:0,0,1	0/1:7,0:7:10.01:17,0,10	1/1:16,0:15:6.66:70,7,0	0/0:6,0:6:3.48:0,3,38	1/1:13,0:11:7.75:239,8,0	1/1:9,0:8:2.99:23,3,0	1/1:7,0:5:8.95:68,9,0
chr10	47525827	.	GAC	G	1482.48	PASS	AB=0.993;AC=40;AF=0.769;AN=52;BaseQRankSum=1.336;DP=346;FS=8.192;HRun=0;HaplotypeScore=81.7742;InbreedingCoeff=0.1442;MQ=56.44;MQ0=13;MQRankSum=-1.931;QD=5.31;ReadPosRankSum=-2.449;VQSLOD=0.7739;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:20:54.07:0,54,833	./.	0/1:17,0:4:3.75:4,0,5	0/0:34,1:13:7.96:0,8,79	1/1:15,2:16:14.53:120,15,0	1/1:16,0:15:0.89:2,1,0	1/1:16,0:16:20.97:176,21,0	1/1:23,0:21:44.36:302,44,0	./.	0/1:10,0:10:39.91:48,0,40	0/1:10,0:8:2.71:45,0,3	1/1:10,0:10:5.60:49,6,0	1/1:3,0:3:3.88:27,4,0	1/1:15,0:15:6.07:90,6,0	1/1:11,5:15:5.99:50,6,0	0/1:8,0:8:32.11:32,0,52	1/1:12,1:12:3:25,3,0	1/1:10,0:10:7.99:133,8,0	0/1:6,0:4:6.60:30,0,7	1/1:8,0:8:2.92:17,3,0	1/1:13,0:12:5.71:30,6,0	0/1:11,0:10:0:0,0,0	1/1:7,0:7:6.13:22,6,0	0/1:15,0:14:5.31:46,0,5	0/1:6,0:6:9.25:18,0,9	1/1:11,2:11:26.22:217,26,0	1/1:8,2:9:8.97:69,9,0	1/1:5,0:3:8.95:68,9,0
chr10	47525835	.	G	GAGAC	482.34	PASS	AB=1.000;AC=13;AF=0.241;AN=54;BaseQRankSum=-1.140;DP=334;FS=0.000;HRun=0;HaplotypeScore=82.6562;InbreedingCoeff=0.1322;MQ=36.94;MQ0=16;MQRankSum=-2.336;QD=2.84;ReadPosRankSum=-2.107;VQSLOD=1.3270;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:20:51.12:0,51,858	./.	0/0:15,0:2:0.47:0,0,1	0/1:39,0:7:2.18:2,0,33	0/0:16,0:15:11.53:0,12,97	1/1:5,9:15:2.84:40,3,0	1/1:17,0:17:23.82:274,24,0	0/1:23,0:21:18.58:227,0,19	0/1:8,0:8:0:0,0,0	0/0:10,0:10:11.45:0,11,140	0/0:9,0:7:13.15:0,13,91	0/0:9,0:9:2.46:0,2,22	0/0:3,0:3:0:0,0,0	0/0:13,0:13:7.41:0,7,39	0/1:15,0:14:0:0,0,0	0/1:9,0:9:44.18:44,0,140	0/0:11,0:10:2.99:0,3,24	0/0:7,0:7:12.06:0,12,81	0/0:7,0:5:5.21:0,5,63	0/0:8,0:8:2.90:0,3,16	0/0:14,0:13:10.82:0,11,61	0/0:10,0:9:5.98:0,6,46	0/1:7,0:7:9.03:9,0,17	0/1:15,0:14:3.73:4,0,71	0/0:6,0:6:5.94:0,6,42	0/1:12,0:10:0.90:1,0,55	0/1:9,0:8:4.28:4,0,15	0/0:3,0:1:2.96:0,3,19
chr10	47525843	.	GAC	G	55.25	PASS	AB=1.000;AC=9;AF=0.188;AN=48;BaseQRankSum=3.089;DP=325;FS=7.107;HRun=0;HaplotypeScore=78.0207;InbreedingCoeff=-0.1425;MQ=44.31;MQ0=12;MQRankSum=-2.354;QD=0.50;ReadPosRankSum=-4.291;VQSLOD=-0.5091;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:17:45.10:0,45,760	./.	0/1:22,0:7:9.69:10,0,21	0/1:38,0:8:4.53:5,0,115	0/0:13,2:14:14.99:0,15,146	0/0:16,0:15:2.85:0,3,45	0/0:18,0:18:6.88:0,7,157	0/0:22,0:20:47.51:0,48,396	./.	0/0:9,0:9:6.61:0,7,170	0/0:9,0:7:15.04:0,15,196	0/0:9,0:9:6.39:0,6,50	1/1:2,0:2:0.47:1,0,0	0/0:12,0:12:8.37:0,8,59	./.	0/1:9,0:9:9.65:10,0,127	0/0:11,0:10:2.99:0,3,23	0/1:7,0:7:51.11:51,0,62	0/0:6,0:5:12.22:0,12,76	0/0:8,0:8:2.94:0,3,18	0/0:13,0:12:11.65:0,12,113	0/0:10,0:9:6:0,6,73	0/1:8,0:8:2.81:3,0,80	0/1:14,0:13:11.50:13,0,11	0/0:6,0:6:5.99:0,6,79	0/1:11,0:10:72.13:72,0,97	0/0:9,0:8:2.98:0,3,21	./.
chr10	47525849	.	G	GAC	112.87	PASS	AB=0.937;AC=6;AF=0.120;AN=50;BaseQRankSum=1.615;DP=333;FS=0.000;HRun=0;HaplotypeScore=76.5966;InbreedingCoeff=-0.0005;MQ=43.72;MQ0=17;MQRankSum=-0.544;QD=1.36;ReadPosRankSum=-2.645;VQSLOD=0.5425;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:16:39.13:0,39,595	./.	0/1:37,0:9:11.23:11,0,176	0/0:47,0:15:34.22:0,34,385	0/0:14,0:14:15.05:0,15,229	0/0:15,0:14:3.01:0,3,41	0/0:17,0:17:26.69:0,27,361	0/0:22,0:20:51.10:0,51,752	0/1:4,0:4:0:0,0,0	0/0:7,0:7:8.06:0,8,166	0/0:7,0:6:15.05:0,15,226	0/0:9,0:9:5.69:0,6,57	0/0:2,0:2:0:0,0,0	0/1:11,1:12:0.47:0,0,82	./.	0/1:7,0:7:39.49:39,0,77	0/0:10,0:9:3.01:0,3,46	0/0:7,0:7:16.58:0,17,148	0/1:5,3:7:99:148,0,103	0/0:3,5:8:3.01:0,3,45	0/0:9,3:11:12.04:0,12,179	0/0:10,0:9:5.94:0,6,90	0/0:7,0:7:6.48:0,6,73	0/1:14,0:13:6.67:14,0,7	0/0:5,0:5:6.02:0,6,92	0/0:10,0:9:4.24:0,4,213	0/0:8,1:8:6:0,6,70	./.
chr10	47527391	.	T	TC	16024.56	PASS	AB=0.691;AC=25;AF=0.446;AN=56;BaseQRankSum=-8.317;DP=1003;FS=38.907;HRun=1;HaplotypeScore=138.1740;InbreedingCoeff=-0.8065;MQ=70.15;MQ0=2;MQRankSum=-10.482;QD=17.63;ReadPosRankSum=-4.563;VQSLOD=1.6817;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,126,1619	0/1:8,4:12:99:143,0,274	0/0:28,0:28:81.17:0,81,1004	0/0:23,0:23:32.38:0,32,714	0/1:9,17:26:99:582,0,206	0/1:27,24:50:99:980,0,714	0/1:29,34:63:99:1179,0,807	0/1:34,53:87:99:2373,0,702	0/1:26,16:42:99:552,0,851	0/1:17,21:38:99:787,0,546	0/1:14,11:25:99:414,0,398	0/1:21,9:30:99:361,0,616	0/1:15,16:30:99:636,0,347	0/1:12,24:36:99:925,0,361	0/1:19,22:41:99:912,0,541	0/1:14,8:22:99:293,0,470	0/1:19,15:34:99:409,0,577	0/1:19,14:33:99:523,0,621	0/1:16,14:30:99:525,0,434	0/1:18,14:32:99:532,0,604	0/1:26,15:41:99:532,0,603	0/1:22,10:32:99:355,0,723	0/1:29,13:42:99:417,0,968	0/1:18,9:26:99:231,0,392	0/1:19,19:38:99:657,0,593	0/1:18,22:40:99:918,0,470	0/1:19,16:35:99:489,0,607	0/1:13,8:21:99:299,0,405
chr10	47528841	.	AC	A	648.99	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.732;DP=639;FS=1.871;HRun=3;HaplotypeScore=59.9601;InbreedingCoeff=0.9572;MQ=78.15;MQ0=0;MQRankSum=-2.459;QD=30.90;ReadPosRankSum=-0.870;VQSLOD=3.1219;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:87.29:0,87,1252	0/0:8,0:8:24.07:0,24,328	0/0:7,0:7:21.07:0,21,284	0/0:21,0:21:50.60:0,51,694	0/0:25,0:25:75.25:0,75,1069	0/0:6,0:6:18.05:0,18,241	0/0:27,0:27:72.21:0,72,999	0/0:34,0:34:93.31:0,93,1339	0/0:21,0:21:60.20:0,60,863	0/0:32,0:32:96.15:0,96,1334	0/0:31,0:31:90.28:0,90,1259	0/0:24,0:24:69.23:0,69,993	0/0:21,0:21:63.20:0,63,890	0/0:29,0:29:87.27:0,87,1218	0/0:21,0:21:63.21:0,63,906	1/1:1,20:21:60.19:744,60,0	0/0:29,0:29:84.26:0,84,1188	0/0:26,0:26:78.26:0,78,1121	0/0:26,0:26:78.22:0,78,1068	0/0:19,0:19:57.18:0,57,802	0/0:49,0:49:99:0,144,2048	0/0:15,0:15:42.13:0,42,587	0/0:17,0:17:48.15:0,48,674	0/0:23,0:23:60.20:0,60,864	0/0:24,0:24:72.24:0,72,1035	0/0:31,0:31:90.30:0,90,1280	0/0:16,0:15:48.16:0,48,691	0/0:4,0:4:12.04:0,12,173
chr10	47529307	.	ATCTCTCTCTC	A	1344.19	PASS	AB=0.927;AC=28;AF=0.538;AN=52;BaseQRankSum=2.689;DP=549;FS=8.317;HRun=0;HaplotypeScore=158.3600;InbreedingCoeff=0.2843;MQ=65.67;MQ0=31;MQRankSum=-0.271;QD=5.33;ReadPosRankSum=1.927;VQSLOD=2.0871;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,12:30:0.89:2,1,0	0/1:5,0:6:10.29:10,0,42	0/0:46,0:21:2.50:0,2,9	0/0:75,0:28:2.10:0,2,8	1/1:13,0:14:6.02:117,6,0	0/0:28,0:28:15.05:0,15,619	0/0:35,0:34:12.47:0,12,427	0/0:24,0:23:3.90:0,4,63	0/0:10,0:10:5.98:0,6,177	0/1:17,0:17:46.42:200,0,46	1/1:6,0:7:9.03:151,9,0	0/1:18,0:17:42.45:42,0,52	0/1:6,0:5:26.86:27,0,48	./.	1/1:11,0:14:1.91:12,2,0	1/1:20,0:20:10.74:163,11,0	1/1:10,0:13:0.90:64,1,0	0/1:10,0:11:3:165,0,3	1/1:9,0:9:3.01:70,3,0	0/1:11,0:14:0.01:0,0,0	./.	0/0:14,0:12:8.18:0,8,143	0/0:15,0:16:6.01:0,6,59	0/0:19,0:20:9.02:0,9,166	1/1:13,1:18:3.01:60,3,0	1/1:11,1:14:11.96:229,12,0	1/1:22,0:23:5.69:81,6,0	1/1:10,1:11:5.99:105,6,0
chr10	47529368	.	ACACACACACTGT	A	3909.42	PASS	AB=1.000;AC=30;AF=0.577;AN=52;BaseQRankSum=3.166;DP=743;FS=9.199;HRun=0;HaplotypeScore=219.2862;InbreedingCoeff=0.3420;MQ=33.29;MQ0=72;MQRankSum=-0.995;QD=11.07;ReadPosRankSum=-0.548;VQSLOD=1.4646;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:40:40.69:0,41,2155	1/1:7,0:7:3.10:43,3,0	0/0:111,0:17:51.13:0,51,1421	0/0:93,0:23:63.61:0,64,1356	1/1:26,1:27:0.14:0,0,0	0/1:26,0:26:4.10:4,0,2304	0/0:29,0:28:44.85:0,45,1848	1/1:31,0:25:56.98:1012,57,0	0/1:17,0:17:36.05:36,0,363	1/1:23,0:21:46.04:985,46,0	./.	0/1:12,0:11:99:131,0,544	0/1:13,0:12:75.34:75,0,451	1/1:15,0:15:2.19:8,2,0	1/1:24,0:24:2.89:16,3,0	0/1:20,0:19:92.91:104,0,93	1/1:21,0:19:5.99:97,6,0	0/1:16,0:15:3.01:253,0,3	0/0:20,0:18:30.81:0,31,485	1/1:25,0:24:0.47:1,0,0	./.	1/1:21,0:19:1.51:5,2,0	0/0:18,0:15:3.01:0,3,103	0/0:22,0:20:6.47:0,6,142	1/1:22,3:25:2.62:32,3,0	1/1:22,0:22:44.92:804,45,0	0/0:23,0:22:22.94:0,23,473	1/1:8,0:8:12.04:303,12,0
chr10	47529370	.	ACACACACTGT	A	4456.26	PASS	AB=0.931;AC=30;AF=0.577;AN=52;BaseQRankSum=2.370;DP=755;FS=10.153;HRun=0;HaplotypeScore=211.5309;InbreedingCoeff=0.3514;MQ=33.75;MQ0=73;MQRankSum=-1.922;QD=12.48;ReadPosRankSum=-1.040;VQSLOD=2.7127;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:42:50.20:0,50,2032	1/1:7,0:7:3.16:73,3,0	0/0:114,0:17:51.13:0,51,1236	0/0:94,0:23:63.60:0,64,1151	1/1:8,18:26:0.15:0,0,0	0/1:26,0:26:0.83:1,0,2041	0/0:29,0:28:47.73:0,48,1663	1/1:31,0:25:60.20:1109,60,0	0/1:17,0:17:36.09:36,0,302	1/1:9,13:21:46.04:1191,46,0	./.	0/1:12,0:11:99:141,0,443	0/1:13,0:12:62.58:63,0,380	1/1:16,0:16:2.19:8,2,0	1/1:24,0:24:3:29,3,0	0/1:24,0:23:53.39:120,0,53	1/1:7,14:19:5.30:101,5,0	0/1:5,12:16:3.01:335,0,3	0/0:20,0:18:12.15:0,12,400	1/1:26,0:25:0.47:1,0,0	./.	1/1:21,0:19:1.53:5,2,0	0/0:20,0:17:3.89:0,4,81	0/0:22,0:20:5.91:0,6,113	1/1:11,13:24:2.75:32,3,0	1/1:5,17:22:44.98:885,45,0	0/0:23,0:22:22.11:0,22,316	1/1:6,2:8:12.04:325,12,0
chr10	47529376	.	ACTGT	A	3646.38	PASS	AB=0.917;AC=27;AF=0.519;AN=52;BaseQRankSum=5.403;DP=757;FS=1.638;HRun=0;HaplotypeScore=182.6362;InbreedingCoeff=0.2652;MQ=35.74;MQ0=73;MQRankSum=-3.239;QD=9.86;ReadPosRankSum=-0.714;VQSLOD=3.2003;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,1:39:53.64:0,54,1349	1/1:7,0:7:2.99:44,3,0	0/0:121,0:18:54.06:0,54,848	0/0:101,0:28:75.42:0,75,954	0/1:20,6:26:0.27:0,0,0	0/1:26,0:26:0.75:1,0,1252	0/0:26,0:25:51.04:0,51,1182	1/1:9,21:24:63.22:1189,63,0	0/1:12,5:17:35.98:36,0,121	1/1:18,3:20:46.03:668,46,0	./.	0/1:10,2:11:99:152,0,152	0/1:13,0:12:67.92:68,0,241	1/1:16,1:17:2.18:8,2,0	0/0:24,0:24:2.80:0,3,13	1/1:19,3:22:23.14:229,23,0	1/1:15,5:18:4.26:45,4,0	0/1:14,1:14:5.75:154,0,6	0/1:19,0:18:36.16:36,0,337	0/1:26,0:26:0:0,0,0	./.	0/1:19,4:20:1.03:1,0,22	0/0:18,2:17:6.01:0,6,107	0/0:18,5:21:11.18:0,11,114	0/1:19,4:23:0.13:1,0,0	1/1:18,3:21:42.14:713,42,0	0/1:25,0:24:99:137,0,159	1/1:6,1:7:12.04:165,12,0
chr10	47529377	.	CTG	C	1754.05	PASS	AB=0.988;AC=20;AF=0.385;AN=52;BaseQRankSum=7.040;DP=741;FS=4.034;HRun=0;HaplotypeScore=175.3688;InbreedingCoeff=0.5188;MQ=36.16;MQ0=73;MQRankSum=-2.532;QD=7.22;ReadPosRankSum=-0.739;VQSLOD=3.2472;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,1:36:53.51:0,54,919	0/0:7,0:7:1.61:0,2,12	0/0:122,0:19:54.87:0,55,601	0/0:101,0:28:73.33:0,73,576	0/1:26,0:26:0.16:0,0,0	0/0:23,1:24:22.71:0,23,849	0/0:25,0:24:46.10:0,46,788	1/1:28,0:22:63.19:750,63,0	0/1:14,0:14:8.51:9,0,102	1/1:17,0:17:43.80:329,44,0	./.	0/1:12,0:11:99:101,0,126	0/1:12,1:12:17.82:18,0,194	0/0:18,0:18:2.45:0,2,9	0/0:22,2:24:2.98:0,3,21	1/1:16,7:23:18.72:134,19,0	1/1:19,0:17:2.88:15,3,0	1/1:15,0:14:11.53:79,12,0	0/0:19,0:18:33.89:0,34,425	0/1:26,0:26:0:0,0,0	./.	0/0:22,0:19:2.88:0,3,39	0/0:20,0:17:6.02:0,6,88	0/0:20,1:19:11.67:0,12,159	0/1:23,0:23:0.05:0,0,0	1/1:20,0:20:41.58:409,42,0	0/0:26,0:25:35.41:0,35,283	1/1:6,0:6:11.53:78,12,0
chr10	47529380	.	TCACACA	T	2038.75	PASS	AB=0.909;AC=24;AF=0.444;AN=54;BaseQRankSum=5.692;DP=740;FS=4.130;HRun=0;HaplotypeScore=192.1377;InbreedingCoeff=0.5600;MQ=37.06;MQ0=64;MQRankSum=-5.620;QD=7.66;ReadPosRankSum=4.119;VQSLOD=2.6092;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:37:59.76:0,60,1928	1/1:6,0:6:6.02:84,6,0	0/0:124,0:21:48.04:0,48,1129	0/0:99,0:29:54.11:0,54,902	0/1:26,0:26:0.04:0,0,0	0/0:23,0:23:54.19:0,54,1773	0/0:21,0:23:48.16:0,48,1378	0/0:28,0:23:1.42:0,1,68	0/0:8,0:14:9.03:0,9,237	1/1:18,0:17:27.75:334,28,0	0/0:18,0:18:3.01:0,3,64	0/0:7,0:12:18.06:0,18,431	0/0:6,0:13:15.94:0,16,396	1/1:3,15:18:2.52:63,3,0	1/1:25,0:25:3.01:42,3,0	0/1:12,0:23:33.22:150,0,33	1/1:20,0:18:3.48:36,3,0	1/1:13,0:13:8.85:105,9,0	1/1:6,13:18:35.92:555,36,0	1/1:3,21:24:0.47:1,0,0	./.	0/0:10,0:21:5.78:0,6,109	0/0:11,0:17:6.49:0,6,181	0/0:9,0:20:11.51:0,12,280	0/1:22,0:23:0.12:0,0,0	0/1:21,0:21:86.96:87,0,111	1/1:9,15:24:30.10:646,30,0	1/1:6,0:6:9:108,9,0
chr10	47529388	.	A	ACTGT	208.82	PASS	AB=1.000;AC=4;AF=0.071;AN=56;BaseQRankSum=3.438;DP=739;FS=0.000;HRun=0;HaplotypeScore=198.7734;InbreedingCoeff=0.3519;MQ=40.16;MQ0=48;MQRankSum=-3.351;QD=3.03;ReadPosRankSum=-0.984;VQSLOD=2.4880;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:43:72.15:0,72,1433	0/0:6,0:6:5.62:0,6,42	0/0:105,0:20:54.15:0,54,978	0/0:84,0:30:68.70:0,69,1281	0/0:30,0:30:12.04:0,12,237	0/0:25,0:25:63.22:0,63,1241	0/0:23,0:22:51.17:0,51,967	0/0:27,0:24:58.30:0,58,747	0/0:15,0:15:11.83:0,12,116	0/0:19,0:19:47.65:0,48,719	0/0:20,0:20:9.03:0,9,178	0/0:14,0:14:20.79:0,21,352	0/0:16,0:15:9.01:0,9,198	0/1:17,0:17:8.69:9,0,15	0/0:25,0:25:2.73:0,3,40	1/1:19,7:26:5.31:287,5,0	0/0:22,0:20:5.84:0,6,106	0/0:13,0:13:12.03:0,12,177	0/0:16,0:15:19.73:0,20,374	0/1:26,0:26:0.02:0,0,0	0/0:13,0:11:3.01:0,3,46	0/0:26,0:23:11.37:0,11,169	0/0:25,0:22:20.89:0,21,351	0/0:23,0:21:14.87:0,15,160	0/0:29,0:29:15.03:0,15,261	0/0:23,0:23:45.98:0,46,699	0/0:21,0:20:16.45:0,16,314	0/0:6,0:6:9.91:0,10,136
chr10	47529392	.	ACACACACACG	A	517.43	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=6.793;DP=730;FS=5.135;HRun=0;HaplotypeScore=230.8390;InbreedingCoeff=0.4578;MQ=43.05;MQ0=43;MQRankSum=-5.521;QD=4.35;ReadPosRankSum=4.261;VQSLOD=1.9388;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:43:83.39:0,83,3349	1/1:4,3:7:6.02:197,6,0	0/0:97,0:20:57.18:0,57,1731	0/0:77,0:30:39.23:0,39,1485	0/0:32,0:32:17.80:0,18,391	0/0:27,0:27:69.22:0,69,3016	0/0:24,0:23:54.19:0,54,2308	0/0:23,0:22:45.15:0,45,542	0/0:13,0:14:12.04:0,12,485	0/1:21,0:21:99:169,0,222	0/0:21,0:21:12.03:0,12,280	0/0:14,0:14:25.41:0,25,1033	0/0:16,0:15:21.96:0,22,759	0/0:19,0:19:11.78:0,12,134	1/1:4,20:24:3.01:99,3,0	0/1:25,0:25:40.94:41,0,232	0/0:27,0:25:2.17:0,2,228	1/1:13,0:13:8.68:62,9,0	0/0:14,0:13:35.40:0,35,314	0/0:26,0:26:1.80:0,2,56	0/0:14,0:13:11.98:0,12,182	0/0:26,0:23:11.79:0,12,295	0/0:25,0:23:24.92:0,25,730	0/0:19,0:19:14.94:0,15,526	0/0:29,0:29:17.25:0,17,488	0/1:23,0:23:20.94:21,0,443	0/0:20,0:19:27.59:0,28,191	1/1:6,0:6:8.89:80,9,0
chr10	47530970	.	AG	A	717.71	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.443;DP=603;FS=1.840;HRun=1;HaplotypeScore=57.4700;InbreedingCoeff=0.9990;MQ=81.05;MQ0=0;MQRankSum=-4.306;QD=35.89;ReadPosRankSum=2.635;VQSLOD=3.7764;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:54.03:0,54,695	0/0:15,0:15:45.15:0,45,658	0/0:31,0:31:87.25:0,87,1215	0/0:13,0:13:32.56:0,33,396	0/0:34,0:34:99:0,102,1391	0/0:30,0:30:90.29:0,90,1285	0/0:12,0:12:36.11:0,36,507	0/0:28,0:28:81.24:0,81,1121	0/0:22,0:22:66.21:0,66,946	0/0:26,0:26:77.28:0,77,1088	0/0:24,0:24:72.22:0,72,1013	0/0:19,0:19:57.17:0,57,792	0/0:23,0:23:69.22:0,69,986	0/0:25,0:25:72.16:0,72,973	0/0:26,0:26:78.22:0,78,1099	1/1:1,19:20:60.09:813,60,0	0/0:17,0:17:51.06:0,51,660	0/0:12,0:11:36.09:0,36,484	0/0:12,0:12:36.11:0,36,492	0/0:29,0:29:84.24:0,84,1169	0/0:16,0:16:48.13:0,48,662	0/0:21,0:21:63.21:0,63,919	0/0:31,0:31:93.27:0,93,1292	0/0:11,0:11:33.11:0,33,480	0/0:21,0:21:63.21:0,63,922	0/0:26,0:26:78.21:0,78,1037	0/0:24,0:24:72.24:0,72,1052	0/0:16,0:16:48.16:0,48,702
chr10	47531419	.	AG	A	812.05	PASS	AC=4;AF=0.074;AN=54;BaseQRankSum=5.834;DP=480;FS=0.000;HRun=2;HaplotypeScore=47.6328;InbreedingCoeff=0.9374;MQ=54.06;MQ0=13;MQRankSum=-0.351;QD=26.20;ReadPosRankSum=-1.781;VQSLOD=2.8163;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,99,1424	0/0:10,0:10:30.10:0,30,449	0/0:10,0:2:5.85:0,6,45	./.	0/0:30,0:30:84.28:0,84,1247	1/1:1,15:16:42.14:545,42,0	1/1:2,13:13:30.10:388,30,0	0/0:26,0:23:63.15:0,63,873	0/0:18,0:18:54.18:0,54,809	0/0:7,0:7:21.07:0,21,315	0/0:19,0:19:51.16:0,51,743	0/0:18,0:18:54.17:0,54,789	0/0:13,0:13:39.13:0,39,578	0/0:19,0:19:54.17:0,54,786	0/0:21,0:21:63.21:0,63,942	0/0:12,0:12:36.11:0,36,521	0/0:35,0:35:99:0,102,1517	0/0:23,0:23:66.21:0,66,969	0/0:11,0:10:24.04:0,24,321	0/0:26,0:26:75.25:0,75,1116	0/0:22,0:21:60.16:0,60,852	0/0:12,0:12:33.07:0,33,468	0/0:9,0:8:21.07:0,21,315	0/0:17,0:17:48.14:0,48,673	0/0:13,0:13:39.13:0,39,579	0/0:14,0:13:36.11:0,36,522	0/0:19,0:18:54.18:0,54,799	0/0:6,0:6:18:0,18,206
chr10	47531458	.	G	GA	502.06	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=1.128;DP=481;FS=1.898;HRun=9;HaplotypeScore=49.8548;InbreedingCoeff=0.8577;MQ=65.89;MQ0=7;MQRankSum=-0.616;QD=20.08;ReadPosRankSum=-0.298;VQSLOD=3.8338;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:77.88:0,78,664	0/0:5,0:5:15:0,15,130	0/0:28,0:14:23.90:0,24,194	0/0:18,0:8:3.78:0,4,68	0/0:21,0:21:50.95:0,51,434	1/1:2,14:16:39.09:422,39,0	1/1:2,6:8:18.05:199,18,0	0/0:27,0:26:65.96:0,66,566	0/0:15,0:15:41.99:0,42,364	0/0:14,0:14:35.98:0,36,311	0/0:12,0:12:29.99:0,30,260	0/0:16,0:16:47.99:0,48,417	0/0:13,0:13:29.96:0,30,257	0/0:23,0:23:56.94:0,57,487	0/0:25,0:25:59.93:0,60,513	0/0:10,0:10:29.21:0,29,241	0/0:29,0:30:73.93:0,74,618	0/0:24,0:24:56.27:0,56,456	0/0:17,0:17:38.95:0,39,333	0/0:25,0:25:62.94:0,63,540	0/0:18,1:18:50.87:0,51,442	0/0:12,0:12:29.94:0,30,250	0/0:13,0:13:38.83:0,39,326	0/0:15,0:15:39.46:0,39,339	0/0:15,0:15:38.98:0,39,339	0/0:20,0:20:53.98:0,54,468	0/0:12,0:12:29.99:0,30,259	0/1:1,0:1:0:0,0,0
chr10	47533833	.	G	GA	2185.25	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-0.615;DP=609;FS=3.635;HRun=10;HaplotypeScore=69.5244;InbreedingCoeff=0.9429;MQ=70.34;MQ0=0;MQRankSum=0.565;QD=14.57;ReadPosRankSum=0.439;VQSLOD=3.9695;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:76.21:0,76,742	1/1:3,0:7:11.40:57,11,0	0/0:23,0:20:15.44:0,15,175	0/0:14,0:12:17.89:0,18,138	0/0:24,0:26:60.75:0,61,456	0/0:21,0:21:49.71:0,50,393	0/0:14,0:14:32.92:0,33,264	0/0:38,0:38:74.43:0,74,598	0/0:17,0:17:41.93:0,42,342	0/0:25,0:25:62.74:0,63,504	0/0:19,0:19:47.92:0,48,391	0/0:22,0:22:50.90:0,51,415	0/0:16,0:16:38.95:0,39,320	1/1:4,13:18:8.27:278,8,0	1/1:1,1:20:39.84:200,40,0	1/1:2,1:15:35.18:191,35,0	0/0:28,0:28:71.90:0,72,591	0/0:20,0:20:44.92:0,45,369	1/1:7,16:23:4.80:433,5,0	1/1:9,10:19:18.04:187,18,0	1/1:3,14:18:8.27:278,8,0	0/0:23,0:23:60.64:0,61,482	0/0:10,0:11:29.01:0,29,227	0/0:23,1:24:30.93:0,31,458	0/0:25,0:25:68.90:0,69,562	0/0:30,0:30:71.83:0,72,583	1/1:2,28:28:72.16:757,72,0	0/0:21,1:22:29.86:0,30,425
chr10	47534576	.	CA	C	7449.65	PASS	AB=0.900;AC=33;AF=0.589;AN=56;BaseQRankSum=12.834;DP=577;FS=0.000;HRun=9;HaplotypeScore=60.7167;InbreedingCoeff=0.9085;MQ=68.72;MQ0=0;MQRankSum=-2.077;QD=22.17;ReadPosRankSum=1.756;VQSLOD=5.5885;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:39:99:0,108,1215	0/0:12,0:12:27.08:0,27,312	0/1:8,1:7:18.30:18,0,38	0/0:12,0:11:8.36:0,8,160	1/1:6,17:23:41.95:384,42,0	0/0:28,0:28:81.23:0,81,922	0/0:16,0:16:36.11:0,36,415	1/1:3,16:19:48.01:435,48,0	1/1:1,14:15:36.02:330,36,0	1/1:7,22:29:63.01:572,63,0	1/1:2,13:15:36.01:329,36,0	1/1:0,15:15:45.02:412,45,0	1/1:0,20:20:54.03:494,54,0	0/0:16,0:16:45.12:0,45,510	0/0:22,0:21:57.14:0,57,639	1/1:0,21:21:60.03:549,60,0	1/1:2,23:25:66.03:604,66,0	1/1:3,22:25:60.02:549,60,0	0/0:17,1:18:8.69:0,9,353	0/0:31,0:31:81.12:0,81,877	0/0:30,0:30:87.22:0,87,976	1/1:1,16:17:39.02:357,39,0	1/1:3,12:15:30.01:275,30,0	1/1:2,31:33:93.05:851,93,0	1/1:2,13:15:30.02:275,30,0	1/1:2,22:24:66.04:604,66,0	0/0:17,0:17:51.15:0,51,589	1/1:1,15:16:45.02:412,45,0
chr10	47534852	.	C	CTTTT	4149.37	PASS	AB=0.900;AC=44;AF=0.786;AN=56;BaseQRankSum=0.345;DP=466;FS=5.653;HRun=14;HaplotypeScore=82.8652;InbreedingCoeff=0.6094;MQ=60.44;MQ0=5;MQRankSum=-4.802;QD=10.81;ReadPosRankSum=-2.865;VQSLOD=-0.3489;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:29:40.26:0,40,463	0/0:0,0:3:8.97:0,9,69	0/0:12,0:9:3.37:0,3,62	0/1:14,0:9:17.08:17,0,34	1/1:2,10:14:17.94:238,18,0	1/1:1,2:11:14.21:166,14,0	1/1:6,0:23:23.83:277,24,0	0/0:20,0:22:17.44:0,17,226	1/1:9,0:17:21.72:124,22,0	1/1:20,1:21:37.64:345,38,0	1/1:4,8:13:18.41:329,18,0	1/1:17,0:17:2.22:176,2,0	1/1:3,0:17:14.65:88,15,0	1/1:5,0:20:3.01:57,3,0	0/0:6,0:14:16.45:0,16,111	1/1:1,0:10:14.57:90,15,0	1/1:8,11:27:11.19:174,11,0	1/1:7,10:18:21.47:339,21,0	1/1:21,0:22:44.68:376,45,0	1/1:17,0:17:25.11:216,25,0	1/1:12,0:11:15.02:170,15,0	1/1:6,0:16:17.67:123,18,0	0/1:6,0:5:9.42:28,0,9	1/1:5,0:19:14.62:85,15,0	1/1:4,6:15:6.02:120,6,0	1/1:4,0:14:26.67:322,27,0	1/1:4,0:13:3.48:55,3,0	1/1:5,10:17:15.04:237,15,0
chr10	47535149	.	A	AG	652.19	PASS	AB=0.773;AC=5;AF=0.089;AN=56;BaseQRankSum=4.115;DP=670;FS=0.750;HRun=1;HaplotypeScore=123.4163;InbreedingCoeff=-0.0976;MQ=48.49;MQ0=19;MQRankSum=-1.611;QD=5.93;ReadPosRankSum=2.019;VQSLOD=0.6224;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:78.25:0,78,843	0/0:10,0:10:18.53:0,19,222	0/0:32,0:12:24.03:0,24,285	0/0:35,0:11:23.48:0,23,254	0/0:32,0:31:54.10:0,54,653	0/0:22,0:22:18.04:0,18,228	0/0:37,0:35:69.17:0,69,847	0/0:32,0:32:86.30:0,86,1052	0/0:16,0:16:32.81:0,33,380	0/0:34,0:33:76.65:0,77,907	0/0:15,0:15:26.99:0,27,283	0/0:16,0:15:33.09:0,33,404	0/0:26,0:26:59.95:0,60,762	0/1:9,11:18:54.54:190,0,55	0/0:23,0:23:30.06:0,30,332	0/0:31,0:30:44.72:0,45,468	0/0:18,0:18:18.01:0,18,426	0/0:19,0:19:55.69:0,56,663	0/1:23,9:28:99:156,0,495	0/1:13,5:18:99:165,0,115	0/1:17,2:16:23.10:94,0,23	0/0:21,0:20:21.15:0,21,255	0/0:25,0:24:38.70:0,39,464	0/0:30,0:30:39.10:0,39,468	0/0:13,0:13:27.07:0,27,329	0/0:20,0:19:51.10:0,51,629	0/1:14,7:18:99:164,0,298	0/0:12,0:10:21.95:0,22,268
chr10	47535162	.	GAGAGAGAGAT	G	4721.80	PASS	AB=1.000;AC=26;AF=0.464;AN=56;BaseQRankSum=1.622;DP=684;FS=33.983;HRun=0;HaplotypeScore=208.8344;InbreedingCoeff=-0.4440;MQ=54.89;MQ0=16;MQRankSum=4.651;QD=8.55;ReadPosRankSum=-4.032;VQSLOD=1.6167;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:43.11:0,43,2607	0/0:8,0:8:9.50:0,10,242	0/0:29,0:14:32.07:0,32,391	0/0:31,0:16:31.78:0,32,367	0/1:37,0:36:99:366,0,228	1/1:25,0:25:37.90:290,38,0	0/1:36,0:34:99:254,0,456	0/1:37,0:37:99:392,0,914	0/1:19,0:19:84.97:85,0,505	0/1:33,0:32:99:259,0,1229	0/1:21,0:21:99:232,0,250	0/1:18,0:17:99:160,0,206	0/1:30,0:30:99:206,0,578	0/1:22,0:20:85.56:86,0,394	0/0:22,0:22:23.86:0,24,680	1/1:3,20:23:18.48:522,18,0	0/1:21,0:21:99:152,0,456	0/1:17,0:17:63.48:63,0,708	0/1:23,0:19:99:117,0,329	0/1:17,0:17:95.50:96,0,154	0/1:25,0:22:53.52:233,0,54	0/1:23,0:22:99:219,0,174	0/1:21,0:20:99:135,0,294	0/1:31,0:31:89.52:90,0,599	0/1:12,0:12:93.84:172,0,94	0/1:24,0:23:99:251,0,1104	0/1:20,0:18:79.04:79,0,534	1/1:17,0:16:28.81:262,29,0
chr10	47535170	.	GAT	G	7239.46	PASS	AB=1.000;AC=49;AF=0.875;AN=56;BaseQRankSum=3.325;DP=673;FS=0.455;HRun=0;HaplotypeScore=135.6115;InbreedingCoeff=0.7533;MQ=62.38;MQ0=12;MQRankSum=-1.445;QD=12.66;ReadPosRankSum=2.247;VQSLOD=4.8212;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:79.29:0,79,752	1/1:1,5:6:3.01:44,3,0	0/0:29,0:16:41.04:0,41,393	0/0:32,0:21:46.66:0,47,479	1/1:36,0:35:27.46:421,27,0	1/1:29,0:29:48.09:385,48,0	1/1:32,0:31:35.97:368,36,0	1/1:38,0:38:61.74:682,62,0	1/1:18,0:18:10.20:199,10,0	1/1:32,0:31:11.27:411,11,0	1/1:19,0:19:8.41:264,8,0	1/1:16,0:15:32.95:270,33,0	1/1:31,0:31:45.37:366,45,0	1/1:22,0:20:14.31:178,14,0	1/1:3,16:19:12.03:159,12,0	1/1:20,0:19:17.89:146,18,0	1/1:22,0:22:11.22:235,11,0	0/1:18,0:18:4.07:163,0,4	1/1:23,0:19:38.59:303,39,0	1/1:17,0:17:32.84:255,33,0	1/1:29,0:26:46.17:370,46,0	1/1:22,0:22:41.19:344,41,0	1/1:18,0:18:11.67:179,12,0	1/1:26,0:26:13.82:213,14,0	1/1:13,0:13:26.97:223,27,0	1/1:25,0:24:33.79:362,34,0	1/1:20,0:19:37.66:280,38,0	1/1:21,0:21:53.75:420,54,0
chr10	47535921	.	G	GCGCA	5716.41	PASS	AB=0.950;AC=32;AF=0.571;AN=56;BaseQRankSum=-10.975;DP=605;FS=3.421;HRun=0;HaplotypeScore=179.7589;InbreedingCoeff=-0.2813;MQ=52.72;MQ0=11;MQRankSum=6.071;QD=10.93;ReadPosRankSum=0.536;VQSLOD=4.3751;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:32:72.01:0,72,875	0/1:13,0:13:13.87:56,0,14	0/0:19,0:6:15.03:0,15,155	0/0:30,0:14:29.95:0,30,273	0/1:22,0:22:40.30:140,0,40	0/1:16,0:16:45.30:76,0,45	0/1:20,0:20:2.61:206,0,3	1/1:22,0:21:21.48:281,21,0	0/1:5,18:23:7.62:452,0,8	0/1:16,0:16:46.25:117,0,46	0/1:19,0:19:22.68:115,0,23	0/1:5,22:31:5.07:410,0,5	1/1:17,2:19:11.55:422,12,0	0/1:23,0:23:98.63:99,0,153	1/1:20,0:20:16.53:123,17,0	0/1:15,0:15:25.22:102,0,25	0/1:28,0:27:37.80:112,0,38	0/1:23,0:23:38.18:206,0,38	0/1:23,0:21:6.41:179,0,6	0/1:14,0:14:13.52:124,0,14	0/1:35,0:34:99:274,0,101	1/1:15,2:17:6.49:605,6,0	1/1:13,1:14:7.70:474,8,0	1/1:6,28:35:20.80:614,21,0	0/1:27,0:27:72.64:73,0,173	0/1:27,0:27:23.84:244,0,24	0/1:14,0:14:69.20:69,0,81	1/1:7,0:7:20.65:143,21,0
chr10	47535923	.	GCA	G	1943.53	PASS	AB=0.893;AC=33;AF=0.635;AN=52;BaseQRankSum=6.426;DP=606;FS=1.713;HRun=0;HaplotypeScore=171.2850;InbreedingCoeff=0.4030;MQ=52.33;MQ0=13;MQRankSum=-7.549;QD=4.64;ReadPosRankSum=2.026;VQSLOD=3.2243;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:35:4.80:0,5,439	1/1:8,0:13:8.52:42,9,0	./.	./.	1/1:10,11:22:15.03:160,15,0	1/1:7,0:16:16.86:84,17,0	1/1:14,0:19:11.45:59,11,0	1/1:22,0:21:8.78:63,9,0	0/0:24,0:25:27.16:0,27,233	1/1:9,4:15:16.94:164,17,0	0/1:14,5:19:19.16:58,0,19	0/0:30,0:30:21:0,21,197	0/0:17,0:17:23.98:0,24,229	0/1:22,2:24:49.38:49,0,111	1/1:12,0:20:19.46:97,19,0	1/1:10,1:14:14.34:77,14,0	1/1:22,4:26:17.88:157,18,0	1/1:18,5:23:20.89:201,21,0	0/1:21,1:20:25.25:42,0,25	0/1:12,0:14:4.28:4,0,26	0/1:32,4:35:45.03:102,0,45	0/0:16,0:16:32.97:0,33,306	0/0:15,0:15:26.62:0,27,215	0/1:35,1:36:2:2,0,236	1/1:11,9:27:51.64:433,52,0	1/1:18,6:27:29.88:246,30,0	0/1:12,2:15:50.24:70,0,50	1/1:6,0:7:2.92:17,3,0
chr10	47535925	.	A	ACG	5100.13	PASS	AB=0.963;AC=44;AF=0.786;AN=56;BaseQRankSum=-3.523;DP=610;FS=14.949;HRun=0;HaplotypeScore=165.3559;InbreedingCoeff=0.3433;MQ=52.33;MQ0=15;MQRankSum=2.722;QD=9.75;ReadPosRankSum=1.587;VQSLOD=3.8865;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:36:68.79:0,69,940	1/1:13,0:13:11.14:76,11,0	0/0:20,0:5:15.03:0,15,155	0/0:29,0:12:29.95:0,30,273	1/1:21,0:21:17.21:170,17,0	1/1:16,0:16:16.53:114,17,0	1/1:19,0:19:37.30:262,37,0	1/1:22,0:21:45.87:330,46,0	0/1:24,0:24:13.53:178,0,14	1/1:16,0:16:17.17:157,17,0	1/1:20,0:20:13.20:135,13,0	1/1:28,1:29:8.82:226,9,0	0/1:14,3:17:5.76:355,0,6	0/1:23,0:23:67.47:82,0,67	1/1:20,0:20:14.85:102,15,0	1/1:14,0:14:21.42:146,21,0	1/1:27,0:26:20.20:148,20,0	1/1:24,0:24:37.54:243,38,0	1/1:21,0:19:26.94:228,27,0	1/1:14,0:14:6.66:123,7,0	0/1:38,0:37:40.37:167,0,40	1/1:15,1:16:25.42:432,25,0	1/1:14,1:15:19.32:380,19,0	0/1:35,3:37:8.53:271,0,9	1/1:28,0:28:11.19:153,11,0	1/1:27,0:27:57.26:369,57,0	0/1:14,0:14:26.65:112,0,27	1/1:7,0:7:20.69:143,21,0
chr10	47535959	.	A	ATG	735.23	PASS	AB=1.000;AC=6;AF=0.107;AN=56;BaseQRankSum=-3.508;DP=545;FS=80.344;HRun=0;HaplotypeScore=200.8455;InbreedingCoeff=0.1834;MQ=50.31;MQ0=13;MQRankSum=3.032;QD=6.56;ReadPosRankSum=-2.685;VQSLOD=0.1980;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:41:95:0,95,1336	0/0:9,0:9:7.04:0,7,27	0/0:6,0:1:1.25:0,1,3	0/0:11,0:2:2.11:0,2,13	0/0:17,0:17:10.37:0,10,65	0/0:18,0:18:16.48:0,16,70	0/0:15,0:15:5.46:0,5,29	1/1:4,21:25:58.59:822,59,0	0/0:20,0:20:24.95:0,25,251	0/0:20,0:19:1.26:0,1,107	0/1:11,0:11:10.58:11,0,40	0/0:25,0:25:26.56:0,27,275	0/0:15,0:16:6.05:0,6,237	0/0:26,0:26:34.65:0,35,300	0/0:14,0:14:20.94:0,21,98	0/1:12,0:12:4.24:4,0,32	0/1:33,0:33:1.59:2,0,99	0/0:23,0:23:9.21:0,9,90	0/0:19,0:18:1.50:0,2,132	0/0:17,0:16:10.01:0,10,58	0/0:34,0:34:29.25:0,29,277	0/0:19,0:19:26.51:0,27,289	0/0:17,0:18:29.07:0,29,260	0/0:25,0:24:12.56:0,13,319	0/1:30,0:30:4.44:4,0,124	0/0:18,0:18:25.01:0,25,119	0/0:16,0:16:4.51:0,5,118	0/0:4,0:3:2.57:0,3,7
chr10	47535974	.	A	AATAG	445.25	PASS	AB=1.000;AC=13;AF=0.295;AN=44;BaseQRankSum=-0.839;DP=547;FS=6.573;HRun=0;HaplotypeScore=210.0992;InbreedingCoeff=0.2926;MQ=51.50;MQ0=10;MQRankSum=2.351;QD=2.16;ReadPosRankSum=1.557;VQSLOD=1.9437;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:66.14:0,66,887	0/1:7,0:8:0:0,0,0	./.	./.	0/1:21,0:21:9.99:10,0,101	0/0:16,0:18:1.13:0,1,3	./.	0/0:25,0:24:0.88:0,1,2	./.	0/1:22,0:21:9.06:9,0,109	0/0:14,0:14:12.81:0,13,132	./.	0/1:21,0:21:0.04:0,0,0	0/0:26,0:26:30.32:0,30,252	0/1:11,0:14:0.17:0,0,0	./.	0/1:34,0:33:26.48:26,0,328	0/0:22,0:22:17.03:0,17,147	0/0:11,0:11:14.99:0,15,156	0/0:22,0:22:30.69:0,31,204	0/0:26,0:25:0:0,0,0	0/1:14,0:14:0:0,0,0	0/1:17,0:17:0:0,0,0	0/0:21,0:21:3.26:0,3,23	0/1:33,0:33:23.54:24,0,161	1/1:10,8:19:24.01:425,24,0	0/0:18,0:18:9.01:0,9,84	1/1:3,0:3:8.90:68,9,0
chr10	47536012	.	TAGATAGATAGATAGAC	T	1539.56	PASS	AB=1.000;AC=14;AF=0.250;AN=56;BaseQRankSum=-7.284;DP=615;FS=5.413;HRun=0;HaplotypeScore=270.2498;InbreedingCoeff=-0.1546;MQ=54.43;MQ0=9;MQRankSum=3.183;QD=4.78;ReadPosRankSum=-8.176;VQSLOD=0.0775;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,117,6323	0/0:13,0:13:18.58:0,19,128	0/0:11,0:8:17.12:0,17,187	0/0:11,0:10:29.86:0,30,275	0/1:25,0:25:99:111,0,1896	0/0:13,0:13:21.50:0,21,127	0/0:11,0:11:26.79:0,27,210	0/1:26,0:24:99:221,0,290	0/0:19,0:19:10.63:0,11,45	0/1:30,0:30:99:222,0,1643	0/1:20,0:20:99:143,0,1387	0/0:31,0:31:30:0,30,140	0/1:25,0:25:5.45:5,0,48	0/0:24,0:24:39.13:0,39,1471	0/0:13,0:13:29.93:0,30,200	1/1:0,20:20:18.06:351,18,0	0/1:38,0:37:84.56:85,0,3583	0/0:23,0:23:24.08:0,24,942	0/1:19,0:17:99:154,0,709	0/0:26,0:26:10.07:0,10,1552	0/0:20,0:19:3.01:0,3,50	0/0:18,0:18:16.74:0,17,128	0/0:17,0:15:20.16:0,20,117	0/1:25,0:25:99:131,0,380	0/1:37,0:37:99:102,0,3326	0/1:26,0:26:97.28:97,0,1651	0/1:20,0:20:8.31:8,0,530	0/1:11,0:11:67.92:68,0,730
chr10	47536020	.	TAGATAGACAGAC	T	2730.99	PASS	AB=0.681;AC=15;AF=0.278;AN=54;BaseQRankSum=2.046;DP=615;FS=5.585;HRun=0;HaplotypeScore=223.2934;InbreedingCoeff=0.6812;MQ=56.39;MQ0=8;MQRankSum=-5.646;QD=14.01;ReadPosRankSum=1.465;VQSLOD=2.1345;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,114,4988	0/0:10,0:10:21.02:0,21,277	0/0:15,0:13:39.12:0,39,716	0/0:13,0:13:36.12:0,36,659	0/0:29,0:29:37.95:0,38,1435	0/0:13,0:13:27.54:0,28,378	0/0:13,0:13:30.10:0,30,455	0/1:24,0:22:12.50:35,0,12	1/1:0,18:18:12.04:299,12,0	0/0:28,0:28:38.80:0,39,1277	0/0:22,0:22:17.85:0,18,1068	1/1:0,31:31:30.10:753,30,0	1/1:0,27:27:21.07:561,21,0	0/0:26,0:26:33.11:0,33,858	0/0:14,0:14:36.07:0,36,514	1/1:20,0:20:3.24:7,3,0	0/0:39,0:38:61.99:0,62,2748	0/0:23,0:23:24.06:0,24,588	0/0:23,0:21:17.56:0,18,457	0/0:27,0:27:38.97:0,39,1033	./.	0/1:1,16:17:9.95:278,0,10	1/1:2,14:14:17.19:406,17,0	1/1:23,0:23:32.54:492,33,0	0/0:35,0:35:61.49:0,61,2475	0/0:21,0:21:30.94:0,31,1118	0/1:2,0:19:82.02:82,0,141	0/0:11,0:11:7.88:0,8,501
chr10	47536024	.	TAGAC	T	5483.96	PASS	AB=1.000;AC=33;AF=0.611;AN=54;BaseQRankSum=1.035;DP=621;FS=2.138;HRun=0;HaplotypeScore=141.2878;InbreedingCoeff=0.4396;MQ=60.15;MQ0=5;MQRankSum=-2.874;QD=11.45;ReadPosRankSum=0.445;VQSLOD=4.2826;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,114,1953	0/0:11,0:11:23.57:0,24,163	0/0:18,0:16:37.01:0,37,370	0/0:17,0:17:47.72:0,48,419	0/1:29,0:29:99:341,0,225	0/0:10,0:10:26.66:0,27,188	0/0:11,0:11:29.77:0,30,228	1/1:4,16:19:47.55:362,48,0	1/1:18,0:18:11.67:68,12,0	0/1:28,0:28:99:398,0,202	0/1:22,0:22:99:265,0,190	1/1:31,0:31:29.42:179,29,0	1/1:27,0:27:20.58:132,21,0	1/1:3,21:24:24.08:410,24,0	0/0:15,0:15:38.61:0,39,281	1/1:20,0:20:17.65:108,18,0	0/1:40,0:39:99:262,0,627	1/1:4,20:24:15.05:243,15,0	1/1:3,20:22:59.71:548,60,0	1/1:3,26:29:41.95:641,42,0	./.	1/1:17,0:17:11.67:71,12,0	1/1:15,0:14:17.31:104,17,0	1/1:25,0:25:47.73:394,48,0	0/1:35,0:35:99:297,0,396	0/1:23,0:23:99:286,0,167	1/1:18,0:18:26.58:218,27,0	0/1:11,0:11:88.75:160,0,89
chr10	47536316	.	GAGGCC	G	774.90	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.349;DP=737;FS=0.000;HRun=0;HaplotypeScore=139.7211;InbreedingCoeff=0.9999;MQ=81.42;MQ0=0;MQRankSum=-1.687;QD=55.35;ReadPosRankSum=1.041;VQSLOD=4.1868;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,148,4696	0/0:18,0:18:54.19:0,54,1731	0/0:25,0:25:68.82:0,69,1767	0/0:20,0:19:51:0,51,1361	0/0:28,0:28:84.29:0,84,2633	0/0:27,0:27:75.26:0,75,2313	0/0:34,0:34:99:0,102,3236	0/0:18,0:18:54.19:0,54,1729	0/0:33,0:33:93.31:0,93,2877	0/0:30,0:30:81.28:0,81,2575	0/0:14,0:14:42.14:0,42,1342	0/0:27,0:27:81.28:0,81,2613	0/0:24,0:24:72.23:0,72,2163	0/0:27,0:27:81.28:0,81,2425	0/0:30,0:30:90.31:0,90,2804	1/1:1,13:14:39.13:870,39,0	0/0:30,0:30:90.31:0,90,2907	0/0:20,0:20:60.18:0,60,1694	0/0:22,0:22:66.22:0,66,1950	0/0:23,0:23:66.23:0,66,2122	0/0:53,0:53:99:0,154,4833	0/0:18,0:18:51.18:0,51,1647	0/0:18,0:18:48.16:0,48,1547	0/0:34,0:34:99:0,102,3243	0/0:32,0:32:93.31:0,93,2819	0/0:28,0:28:84.29:0,84,2702	0/0:18,0:18:54.19:0,54,1729	0/0:21,0:21:63.22:0,63,2033
chr10	47537169	.	G	GAAA	1325.31	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=2.466;DP=317;FS=1.111;HRun=0;HaplotypeScore=65.5061;InbreedingCoeff=0.7057;MQ=52.45;MQ0=10;MQRankSum=-4.406;QD=8.39;ReadPosRankSum=-3.564;VQSLOD=1.4231;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:84.31:0,84,1944	1/1:6,0:6:9.84:67,10,0	0/0:7,0:5:2.46:0,2,102	0/0:5,0:4:3.01:0,3,40	1/1:2,12:16:14.11:150,14,0	1/1:3,0:3:5.99:51,6,0	1/1:8,0:6:5.36:39,5,0	1/1:10,1:10:12.78:92,13,0	0/0:9,0:7:16.78:0,17,151	1/1:20,1:21:37.82:280,38,0	1/1:5,0:6:10.15:48,10,0	0/0:12,0:12:32.72:0,33,357	0/0:8,0:7:20.41:0,20,153	0/0:16,0:15:20.34:0,20,384	1/1:3,0:3:4.91:57,5,0	1/1:8,0:8:8.45:53,8,0	1/1:16,0:16:27.95:194,28,0	1/1:2,4:6:1.34:41,1,0	0/0:5,0:4:8.99:0,9,103	0/0:17,0:17:12.27:0,12,257	0/0:9,0:9:0.97:0,1,149	0/1:15,0:15:36.45:36,0,176	0/0:8,0:8:9.60:0,10,152	0/0:7,0:7:17.95:0,18,210	1/1:10,0:9:19.27:125,19,0	1/1:14,1:14:18.78:194,19,0	0/0:12,0:12:14.98:0,15,157	1/1:7,1:11:9.14:100,9,0
chr10	47537354	.	CTGTGTGACAGGAA	C	3015.19	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.031;DP=708;FS=2.547;HRun=0;HaplotypeScore=264.2644;InbreedingCoeff=0.9989;MQ=86.81;MQ0=1;MQRankSum=-8.307;QD=91.37;ReadPosRankSum=1.415;VQSLOD=3.0334;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,154,9155	1/1:2,9:11:24.08:930,24,0	0/0:27,0:27:69.24:0,69,3265	0/0:26,0:28:69.20:0,69,3267	0/0:23,0:23:63.22:0,63,3943	0/0:16,0:16:42.14:0,42,2572	0/0:30,0:30:81.25:0,81,4641	0/0:29,0:29:72.23:0,72,3863	0/0:25,0:25:75.26:0,75,4492	0/0:31,0:31:84.29:0,84,5117	0/0:20,0:20:54.19:0,54,3389	0/0:35,0:35:87.30:0,87,5303	0/0:28,0:28:84.29:0,84,5208	0/0:21,0:21:54.19:0,54,3312	1/1:1,21:22:57.20:2206,57,0	0/0:21,0:21:57.18:0,57,3399	0/0:34,0:33:96.29:0,96,5617	0/0:21,0:21:54.19:0,54,3227	0/0:20,0:20:51.17:0,51,2805	0/0:23,0:23:60.16:0,60,3491	0/0:32,0:31:84.29:0,84,5248	0/0:25,0:25:63.21:0,63,3669	0/0:22,0:22:66.21:0,66,3986	0/0:32,0:32:93.32:0,93,5695	0/0:20,0:20:54.19:0,54,3369	0/0:25,0:25:60.20:0,60,3566	0/0:18,0:17:48.16:0,48,2961	0/0:15,0:15:45.15:0,45,2845
chr10	47540783	.	T	TA	618.99	PASS	AB=0.709;AC=5;AF=0.089;AN=56;BaseQRankSum=6.737;DP=677;FS=15.884;HRun=0;HaplotypeScore=75.3331;InbreedingCoeff=-0.0905;MQ=72.20;MQ0=0;MQRankSum=-7.140;QD=4.62;ReadPosRankSum=0.857;VQSLOD=2.1187;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:99:0,99,1345	0/0:18,0:18:54.17:0,54,737	0/0:26,0:24:68.95:0,69,894	0/0:22,0:22:60.09:0,60,735	0/0:16,0:16:45.11:0,45,606	0/0:27,0:27:81.26:0,81,1117	0/0:22,0:22:63.18:0,63,844	0/0:34,0:34:99:0,102,1394	0/0:32,0:32:93.25:0,93,1244	0/0:22,0:22:66.20:0,66,889	0/0:14,0:14:42.13:0,42,568	0/0:24,0:24:72.24:0,72,1005	0/0:28,0:28:84.26:0,84,1156	0/1:14,7:21:2.50:2,0,538	0/0:26,0:26:78.23:0,78,1056	0/0:19,0:19:57.16:0,57,762	0/0:24,0:24:69.21:0,69,945	0/0:25,0:25:72.24:0,72,1006	0/1:13,5:17:99:140,0,492	0/1:19,20:39:72.08:72,0,685	0/1:11,8:19:59.71:60,0,365	0/0:22,0:22:66.22:0,66,916	0/0:15,0:15:42.11:0,42,562	0/0:32,0:32:96.29:0,96,1306	0/0:22,0:21:66.21:0,66,900	0/0:33,0:33:99:0,99,1322	0/1:17,20:37:99:456,0,526	0/0:7,0:7:21.07:0,21,293
chr10	47541506	.	TTGTGTGTGTGTGTGTGTGTGTG	T	197.66	PASS	AB=0.909;AC=13;AF=0.271;AN=48;BaseQRankSum=-1.316;DP=331;FS=4.938;HRun=0;HaplotypeScore=134.7743;InbreedingCoeff=0.4625;MQ=60.58;MQ0=47;MQRankSum=0.917;QD=2.99;ReadPosRankSum=1.804;VQSLOD=2.1631;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:19:15:0,15,460	./.	./.	0/0:27,0:16:2:0,2,31	./.	0/0:6,0:5:3.01:0,3,73	0/0:21,0:19:21.04:0,21,347	0/0:11,0:10:3.93:0,4,12	1/1:13,0:11:12:111,12,0	0/0:8,0:5:6:0,6,54	0/0:10,0:10:8.96:0,9,113	1/1:7,0:5:2.99:25,3,0	1/1:9,0:6:0.99:75,1,0	0/0:5,0:5:2.99:0,3,24	1/1:11,0:9:6.93:51,7,0	0/0:12,0:10:3.01:0,3,76	0/0:16,0:14:17.98:0,18,235	0/0:7,0:5:8.90:0,9,60	0/0:16,0:15:14.04:0,14,135	1/1:7,0:5:1.25:3,1,0	0/0:27,0:21:4.19:0,4,40	./.	0/1:9,0:8:3.33:19,0,3	1/1:9,0:8:5.98:48,6,0	0/0:10,0:9:8.67:0,9,52	0/0:11,0:13:18.05:0,18,426	0/0:6,0:6:2.99:0,3,23	0/0:5,0:2:3.01:0,3,76
chr10	47541560	.	GTA	G	147.69	PASS	AB=1.000;AC=14;AF=0.350;AN=40;BaseQRankSum=2.341;DP=229;FS=3.297;HRun=0;HaplotypeScore=22.7146;InbreedingCoeff=0.4780;MQ=29.54;MQ0=55;MQRankSum=1.150;QD=3.43;ReadPosRankSum=-2.083;VQSLOD=0.6224;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:12:11.44:0,11,104	./.	0/0:34,0:2:5.81:0,6,32	0/0:40,0:8:15.71:0,16,78	0/0:7,0:4:3:0,3,25	0/1:3,0:3:17.96:18,0,18	0/0:15,0:13:14.98:0,15,128	0/0:14,0:14:34.26:0,34,265	0/0:5,0:3:0:0,0,0	0/0:7,0:4:8.69:0,9,54	0/0:5,0:3:2.99:0,3,24	./.	0/0:6,0:3:2.92:0,3,17	1/1:5,0:4:2.90:16,3,0	./.	1/1:2,0:1:2.99:24,3,0	1/1:5,0:3:5.96:43,6,0	./.	1/1:2,7:8:21.13:135,21,0	./.	1/1:14,0:8:2.92:17,3,0	./.	./.	0/1:3,0:2:0.32:0,0,0	0/0:4,0:3:5.85:0,6,35	0/0:8,0:8:14.54:0,15,112	./.	1/1:2,0:1:2.99:24,3,0
chr10	47542433	.	TA	T	3028	PASS	AB=0.690;AC=25;AF=0.446;AN=56;BaseQRankSum=-3.733;DP=676;FS=10.651;HRun=14;HaplotypeScore=92.2639;InbreedingCoeff=0.6502;MQ=73.92;MQ0=3;MQRankSum=-0.109;QD=9.07;ReadPosRankSum=5.670;VQSLOD=1.9791;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,2:48:51.61:0,52,714	0/0:19,0:19:44.99:0,45,404	0/0:24,0:21:20.12:0,20,186	0/1:16,0:15:3.65:4,0,46	0/0:11,0:27:53.38:0,53,312	0/1:9,11:20:25.94:135,0,26	1/1:5,15:21:48.63:320,49,0	0/0:26,1:28:10.16:0,10,283	1/1:11,19:31:46.52:314,47,0	0/0:15,0:27:40.66:0,41,234	0/0:8,0:19:37.37:0,37,202	1/1:9,13:23:0.94:143,1,0	0/1:9,14:25:17.20:175,0,17	1/1:3,18:21:41.62:288,42,0	0/0:23,2:25:33.47:0,33,449	1/1:5,11:17:25.80:170,26,0	0/0:10,0:49:74.60:0,75,413	0/0:6,0:24:34.24:0,34,181	1/1:4,6:11:20.55:131,21,0	0/1:8,18:26:1.93:223,0,2	1/1:10,12:22:29.51:197,30,0	0/1:10,19:29:17.26:254,0,17	1/1:4,23:30:66.46:439,66,0	1/1:8,9:19:35.75:219,36,0	0/0:1,0:20:42.61:0,43,215	0/0:9,0:18:35.04:0,35,222	1/1:12,11:22:32.59:226,33,0	0/0:3,0:12:22.96:0,23,128
chr10	47544118	.	AAACCTATTTCCTCCGTAAGTCTGTGGTCACGGTGTTTTATCAC	A	32252.78	PASS	AC=50;AF=0.926;AN=54;BaseQRankSum=5.706;DP=434;FS=1.754;HRun=0;HaplotypeScore=452.8297;InbreedingCoeff=0.5781;MQ=72.80;MQ0=0;MQRankSum=-8.004;QD=84.43;ReadPosRankSum=5.524;VQSLOD=1.8055;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,13:24:15.05:1647,15,0	1/1:5,4:9:9.03:989,9,0	0/0:17,0:16:42.14:0,42,2928	0/0:13,0:14:39.13:0,39,2203	1/1:14,5:19:15.48:918,15,0	1/1:6,8:13:21.07:2301,21,0	1/1:8,0:8:6:100,6,0	./.	1/1:11,12:23:27.09:2965,27,0	1/1:6,7:13:21.05:1467,21,0	1/1:7,3:10:9.03:922,9,0	1/1:13,8:21:12.04:1318,12,0	1/1:7,7:14:11.64:1317,12,0	1/1:10,8:18:21.07:2305,21,0	1/1:12,8:19:18.06:1973,18,0	1/1:11,7:18:18.06:1977,18,0	1/1:15,9:24:6.49:448,6,0	1/1:8,1:9:3.01:329,3,0	1/1:7,8:15:24.02:902,24,0	1/1:3,10:13:15.01:1337,15,0	1/1:7,6:13:3.01:328,3,0	1/1:14,11:25:27.05:2474,27,0	1/1:9,8:17:14.88:1620,15,0	1/1:4,4:8:6.02:364,6,0	1/1:8,4:12:6.02:659,6,0	1/1:10,11:21:33.09:1947,33,0	1/1:7,5:12:12.04:1314,12,0	1/1:1,1:2:3.01:330,3,0
chr10	47546683	.	ACT	A	1944.49	PASS	AB=0.923;AC=27;AF=0.519;AN=52;BaseQRankSum=0.452;DP=663;FS=6.879;HRun=0;HaplotypeScore=156.2397;InbreedingCoeff=0.6578;MQ=64.48;MQ0=8;MQRankSum=1.848;QD=5.46;ReadPosRankSum=0.409;VQSLOD=2.8382;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:33.55:0,34,392	0/0:9,0:9:8.97:0,9,69	./.	./.	1/1:16,6:22:17.87:182,18,0	0/0:16,0:16:26.94:0,27,230	0/0:26,0:26:14.99:0,15,136	0/0:35,0:33:6.02:0,6,72	0/0:18,1:19:9.03:0,9,101	1/1:16,6:22:25.61:258,26,0	1/1:9,3:12:5.99:56,6,0	0/1:40,3:43:50.26:50,0,252	0/0:27,1:28:14.53:0,15,468	1/1:19,8:28:26.74:256,27,0	0/0:25,0:25:32.94:0,33,287	0/0:21,0:22:23.93:0,24,190	1/1:15,11:25:30.04:312,30,0	1/1:22,5:28:17.88:177,18,0	1/1:20,1:20:3.01:33,3,0	1/1:20,5:25:10.37:101,10,0	0/1:34,6:40:4.10:154,0,4	0/0:23,1:24:23.79:0,24,282	0/0:19,0:19:12.03:0,12,135	0/1:26,1:27:14.46:14,0,163	1/1:10,3:14:6.02:65,6,0	1/1:12,6:19:20.89:209,21,0	1/1:14,6:21:24.02:241,24,0	1/1:7,1:7:3.01:32,3,0
chr10	47546701	.	T	TCA	3453.43	PASS	AB=0.998;AC=29;AF=0.518;AN=56;BaseQRankSum=-6.131;DP=685;FS=7.972;HRun=0;HaplotypeScore=187.5378;InbreedingCoeff=-0.4962;MQ=50.49;MQ0=20;MQRankSum=4.052;QD=5.80;ReadPosRankSum=2.027;VQSLOD=2.7090;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:40,0:39:93.31:164,0,93	0/1:9,0:9:12.21:12,0,89	0/0:25,0:9:23.99:0,24,228	0/0:31,0:9:10.51:0,11,87	1/1:19,0:19:24.34:136,24,0	0/1:17,0:17:38.81:39,0,118	0/1:19,0:19:15.08:15,0,43	0/0:34,0:32:86.42:0,86,753	0/1:18,0:18:27.83:129,0,28	0/1:25,0:25:99:99,0,129	0/1:24,0:24:17.46:125,0,17	0/1:46,0:45:99:228,0,161	0/1:29,0:29:23.13:23,0,326	1/1:24,0:24:12.43:206,12,0	0/1:19,0:20:62.93:63,0,181	1/1:13,7:20:48.87:588,49,0	0/1:26,0:24:14.65:183,0,15	0/1:21,0:21:76.02:76,0,91	0/1:22,0:21:62.64:186,0,63	0/1:32,0:31:40.92:200,0,41	0/1:32,0:32:8.40:300,0,8	0/1:28,0:28:50.79:146,0,51	0/1:26,0:26:56.36:68,0,56	0/1:25,0:25:57.96:58,0,64	1/1:15,0:15:12.91:84,13,0	0/1:22,0:22:74.85:75,0,161	0/1:25,0:25:22.55:196,0,23	0/1:11,0:10:42.49:55,0,42
chr10	47546703	.	T	TCA	1365.35	PASS	AB=0.852;AC=9;AF=0.161;AN=56;BaseQRankSum=-3.955;DP=685;FS=3.227;HRun=0;HaplotypeScore=201.7822;InbreedingCoeff=0.5746;MQ=49.88;MQ0=22;MQRankSum=2.794;QD=12.08;ReadPosRankSum=2.022;VQSLOD=3.6969;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:39:50.01:0,50,254	1/1:6,3:9:3.64:214,4,0	0/0:24,0:9:24.01:0,24,225	0/0:35,0:9:9.75:0,10,68	0/0:19,0:19:28.21:0,28,139	1/1:11,6:17:35.94:481,36,0	0/1:4,15:20:4.83:174,0,5	0/0:33,0:31:83.82:0,84,721	0/0:19,0:19:12.31:0,12,104	0/0:24,0:24:59.03:0,59,371	0/0:24,0:24:24.86:0,25,133	0/0:47,0:46:35.05:0,35,309	0/1:28,0:28:18.22:18,0,270	0/0:21,0:21:48.38:0,48,272	1/1:12,8:20:32.69:572,33,0	0/1:19,0:19:55.57:56,0,75	0/0:26,0:24:59.03:0,59,304	0/0:20,0:20:45.57:0,46,271	0/0:23,0:22:32.02:0,32,236	0/0:32,0:31:50.83:0,51,250	0/0:32,0:32:59.80:0,60,329	0/0:28,0:28:40.48:0,40,195	0/0:26,0:26:24.81:0,25,118	0/0:26,0:26:28.53:0,29,153	0/0:15,0:15:14.02:0,14,67	0/0:21,0:21:59.66:0,60,347	0/0:25,0:25:47.38:0,47,260	0/0:11,0:10:19.85:0,20,104
chr10	47547110	.	TCTTC	T	5818.26	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=0.476;DP=782;FS=1.241;HRun=0;HaplotypeScore=154.0747;InbreedingCoeff=0.9520;MQ=65.41;MQ0=6;MQRankSum=2.930;QD=29.53;ReadPosRankSum=3.164;VQSLOD=5.0289;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:36:36.35:0,36,453	0/0:8,0:17:33.03:0,33,503	0/0:20,0:19:0.46:0,0,205	0/0:23,0:19:11.23:0,11,142	1/1:7,21:28:56.97:801,57,0	0/0:6,0:25:39.13:0,39,683	0/0:10,0:28:51.04:0,51,737	0/0:32,0:32:24.07:0,24,451	0/0:24,0:24:54.16:0,54,1189	1/1:9,18:27:54.15:818,54,0	1/1:4,21:25:54.10:841,54,0	0/0:32,0:32:69.24:0,69,1654	0/0:31,0:31:63.20:0,63,1407	0/0:11,0:30:39.12:0,39,656	0/0:19,0:49:80.82:0,81,1226	0/0:11,0:36:48.12:0,48,758	1/1:5,11:16:24.08:388,24,0	1/1:9,14:23:33.11:533,33,0	0/0:17,0:24:35.98:0,36,605	0/0:6,0:31:72.16:0,72,1170	0/0:8,0:21:27.08:0,27,444	0/0:34,1:34:23.78:0,24,1574	0/0:21,0:21:51.17:0,51,1157	0/0:35,0:35:81.28:0,81,1896	1/1:7,14:21:39.13:630,39,0	1/1:7,20:27:63.14:936,63,0	0/0:10,0:29:45.12:0,45,732	1/1:3,27:30:54.18:872,54,0
chr10	47549056	.	T	TG	914.43	PASS	AB=0.807;AC=27;AF=0.519;AN=52;BaseQRankSum=-1.881;DP=232;FS=3.975;HRun=10;HaplotypeScore=43.3285;InbreedingCoeff=0.5310;MQ=53.15;MQ0=3;MQRankSum=0.453;QD=7.56;ReadPosRankSum=-0.110;VQSLOD=1.0134;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:12,0:12:11.54:63,12,0	./.	0/0:11,0:7:7.85:0,8,80	0/0:16,0:10:11.08:0,11,109	0/0:9,0:10:14.01:0,14,104	1/1:1,6:7:9.02:96,9,0	1/1:6,4:10:11.99:116,12,0	0/1:6,0:6:0:0,0,0	1/1:1,3:4:3.01:32,3,0	0/0:7,0:7:11.97:0,12,98	0/0:9,0:9:23.97:0,24,196	1/1:4,5:9:9.49:97,9,0	1/1:1,7:8:12.03:128,12,0	1/1:2,0:2:0.47:1,0,0	1/1:2,7:9:18.05:191,18,0	0/1:4,0:4:0:0,0,0	0/0:20,0:20:19.69:0,20,354	0/0:13,0:13:23.94:0,24,196	./.	1/1:1,1:3:2.84:14,3,0	1/1:7,2:11:8.48:56,8,0	0/1:4,3:5:18.50:26,0,19	0/1:2,2:3:18.54:26,0,19	0/1:9,9:18:22.04:197,0,22	0/0:8,0:9:22.75:0,23,171	0/0:6,0:8:3.62:0,4,11	1/1:3,1:5:5.85:46,6,0	0/0:5,0:4:8.99:0,9,74
chr10	47552067	.	C	CTT	6282.05	PASS	AB=0.767;AC=38;AF=0.679;AN=56;BaseQRankSum=2.058;DP=502;FS=14.489;HRun=12;HaplotypeScore=125.2165;InbreedingCoeff=0.7468;MQ=52.42;MQ0=9;MQRankSum=-4.567;QD=17.90;ReadPosRankSum=-2.682;VQSLOD=1.6675;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:31:41.22:0,41,419	0/0:10,0:10:26.99:0,27,243	0/0:27,0:9:6.69:0,7,74	0/0:15,0:9:2.23:0,2,8	1/1:14,10:26:39.31:401,39,0	0/0:16,0:16:0.17:0,0,95	0/0:22,0:22:8.86:0,9,152	0/0:22,0:22:35.82:0,36,327	0/1:7,3:10:2.95:208,0,3	1/1:14,9:25:16.27:450,16,0	1/1:21,10:32:63.52:771,64,0	1/1:5,3:8:11.77:111,12,0	1/1:8,2:10:14.99:168,15,0	1/1:15,5:20:18.41:181,18,0	0/0:7,0:7:14.84:0,15,139	0/1:9,0:13:9.55:41,0,10	1/1:10,4:15:24.36:262,24,0	1/1:4,2:6:15.04:197,15,0	1/1:8,4:12:22.70:178,23,0	1/1:20,5:26:35.03:391,35,0	1/1:7,3:10:17.45:169,17,0	1/1:5,8:13:22.31:283,22,0	1/1:12,15:30:53.01:639,53,0	1/1:1,8:12:26.06:311,26,0	1/1:9,6:15:23.87:274,24,0	1/1:11,5:16:27.24:318,27,0	1/1:25,9:35:62.03:713,62,0	1/1:5,5:11:17.55:215,18,0
chr10	47552321	.	T	TC	449.40	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-5.602;DP=514;FS=9.004;HRun=4;HaplotypeScore=70.6683;InbreedingCoeff=0.9721;MQ=73.11;MQ0=0;MQRankSum=0.442;QD=21.40;ReadPosRankSum=-2.232;VQSLOD=1.9749;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:57.07:0,57,609	0/0:6,0:6:15.04:0,15,170	0/0:14,0:13:36.09:0,36,392	0/0:15,0:14:27.73:0,28,381	0/0:23,0:23:69.18:0,69,772	0/0:18,0:18:51.14:0,51,571	0/0:18,0:18:54.15:0,54,612	1/1:7,14:20:42.12:544,42,0	0/0:12,0:12:36.10:0,36,408	0/0:16,0:16:48.12:0,48,526	0/0:23,0:23:57.11:0,57,631	0/0:15,0:15:45.08:0,45,481	0/0:19,0:19:54.15:0,54,612	0/0:13,0:13:33.02:0,33,340	0/0:18,0:18:48.12:0,48,535	0/0:15,0:15:42.11:0,42,468	0/0:18,0:18:51.14:0,51,578	0/0:19,0:18:45.04:0,45,468	0/0:27,0:27:72.16:0,72,780	0/0:18,0:18:21.88:0,22,443	0/0:21,0:21:60.13:0,60,653	0/0:20,0:20:60.12:0,60,645	0/0:32,0:32:90.26:0,90,1020	0/0:16,0:16:48.13:0,48,536	0/0:16,0:16:48.14:0,48,544	0/0:26,0:26:78.19:0,78,860	0/0:26,0:26:72.09:0,72,759	0/0:9,0:9:18.05:0,18,202
chr10	47553935	.	A	AC	2564.13	PASS	AB=0.996;AC=37;AF=0.661;AN=56;BaseQRankSum=-4.462;DP=731;FS=14.156;HRun=0;HaplotypeScore=158.7022;InbreedingCoeff=0.1067;MQ=60.43;MQ0=10;MQRankSum=3.762;QD=4.00;ReadPosRankSum=-2.104;VQSLOD=2.4139;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:37,2:39:15.34:64,0,15	0/1:13,0:13:8.73:37,0,9	0/0:47,0:17:41.74:0,42,322	0/0:21,0:6:14.37:0,14,96	0/1:30,0:30:11.67:57,0,12	1/1:18,0:18:1.75:60,2,0	0/1:24,0:24:2.39:72,0,2	1/1:3,29:31:59.08:821,59,0	0/1:23,0:23:4.31:16,0,4	1/1:32,0:32:23.65:122,24,0	0/1:25,0:25:8.73:26,0,9	1/1:19,0:19:4.88:41,5,0	0/1:26,0:26:0.22:117,0,0	0/0:16,0:15:4.71:0,5,15	0/1:24,0:24:2.33:2,0,22	1/1:24,0:24:7.17:58,7,0	0/1:32,0:31:11.15:56,0,11	1/1:22,0:22:0.91:76,1,0	1/1:28,0:28:23.40:215,23,0	1/1:31,0:31:12.95:182,13,0	1/1:12,0:10:5.52:48,6,0	0/1:33,0:33:1.31:61,0,1	1/1:33,0:33:16.58:159,17,0	1/1:35,0:34:3.64:91,4,0	1/1:24,0:24:7.67:77,8,0	1/1:37,0:37:28.81:201,29,0	0/1:25,0:25:34.43:64,0,34	0/0:6,0:6:5.41:0,5,13
chr10	47554909	.	A	AC	3614.44	PASS	AB=0.656;AC=39;AF=0.696;AN=56;BaseQRankSum=-3.752;DP=303;FS=3.589;HRun=8;HaplotypeScore=41.0412;InbreedingCoeff=0.4242;MQ=86.08;MQ0=0;MQRankSum=-0.782;QD=15.99;ReadPosRankSum=-0.062;VQSLOD=3.0851;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:6,19:25:33.99:402,0,34	0/0:6,0:6:18.01:0,18,165	0/1:8,0:9:8.79:9,0,96	0/0:16,0:16:8.39:0,8,164	1/1:6,1:7:3.37:16,3,0	0/0:17,0:17:41.98:0,42,374	0/0:13,0:14:41.91:0,42,367	0/1:4,8:12:0.30:237,0,0	1/1:2,14:16:30.09:346,30,0	1/1:6,0:6:2.96:19,3,0	1/1:2,0:2:3:25,3,0	1/1:2,13:15:15.46:266,15,0	1/1:1,10:12:23.90:257,24,0	0/1:1,9:10:9.41:155,0,9	0/0:19,0:19:42.01:0,42,382	1/1:2,0:15:28.66:148,29,0	1/1:8,0:8:3.67:21,4,0	1/1:3,0:3:7.14:40,7,0	1/1:1,11:12:30.06:327,30,0	1/1:0,7:7:18.05:208,18,0	1/1:2,12:14:27.08:312,27,0	1/1:1,7:8:18.05:208,18,0	0/1:2,5:7:12.68:123,0,13	1/1:4,7:11:6.02:69,6,0	1/1:5,0:6:3.44:20,3,0	1/1:4,0:4:4.24:18,4,0	1/1:3,14:17:11.71:388,12,0	0/0:5,0:5:2.02:0,2,5
chr10	47554917	.	CAGCCCCCACTGCTT	C	937.05	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=0.753;DP=305;FS=5.985;HRun=0;HaplotypeScore=121.4973;InbreedingCoeff=0.8036;MQ=87.97;MQ0=0;MQRankSum=-1.885;QD=23.43;ReadPosRankSum=-4.621;VQSLOD=0.4843;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:57.20:0,57,3432	0/0:7,0:7:21.07:0,21,1146	0/0:10,0:10:28.89:0,29,1515	0/0:18,0:18:51.17:0,51,2395	1/1:1,3:4:5.98:57,6,0	0/0:16,0:16:48.13:0,48,2666	0/0:19,0:19:57.07:0,57,3137	0/1:11,0:11:3.12:3,0,1051	0/0:15,0:15:28.49:0,28,1663	1/1:0,4:4:6.02:95,6,0	1/1:1,0:1:3:25,3,0	0/0:21,0:21:48.16:0,48,2861	0/0:12,0:12:30.10:0,30,1678	0/0:12,0:12:19.31:0,19,1147	0/0:19,0:19:57.20:0,57,3449	0/0:13,0:13:36.12:0,36,2194	1/1:4,0:6:13.80:139,14,0	1/1:3,0:3:9.03:130,9,0	0/0:13,0:13:13.11:0,13,1360	0/0:7,0:7:21.07:0,21,1303	0/0:15,0:15:36.12:0,36,1872	0/0:8,0:8:21.07:0,21,1252	0/0:9,0:9:24.08:0,24,1481	0/0:10,0:10:14.96:0,15,734	1/1:1,0:5:5.98:92,6,0	1/1:1,1:3:9.03:333,9,0	0/0:16,0:16:42.14:0,42,2323	1/1:1,2:3:6.02:242,6,0
chr10	47557164	.	CAGAGAGAGAGAGAGAGAG	C	6173.17	PASS	AB=0.757;AC=30;AF=0.556;AN=54;BaseQRankSum=7.364;DP=596;FS=73.094;HRun=0;HaplotypeScore=244.5719;InbreedingCoeff=0.2585;MQ=63.56;MQ0=19;MQRankSum=-4.910;QD=18.10;ReadPosRankSum=0.633;VQSLOD=1.2034;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:24:14.41:256,14,0	0/0:4,0:4:6.02:0,6,355	0/0:51,0:21:3.01:0,3,35	0/0:73,0:27:0.30:0,0,0	1/1:18,9:28:12.48:260,12,0	0/0:18,0:18:15.04:0,15,823	0/0:19,0:18:6.02:0,6,326	0/0:24,0:24:33.58:0,34,1342	0/1:7,1:13:43.01:47,0,43	0/1:9,8:17:66.41:513,0,66	1/1:10,9:21:9.50:436,10,0	0/1:13,0:15:70.57:71,0,156	0/1:8,0:17:76.86:124,0,77	1/1:21,5:25:12.93:480,13,0	0/0:14,0:22:20.90:0,21,799	1/1:12,0:17:9.03:377,9,0	0/1:18,10:29:9.14:687,0,9	1/1:11,6:17:9.03:428,9,0	0/1:10,2:11:2.11:140,0,2	1/1:11,4:14:2.27:144,2,0	./.	0/1:10,0:15:8.53:82,0,9	0/1:11,0:14:18.85:39,0,19	0/0:16,0:19:11.56:0,12,139	1/1:8,13:23:18.06:828,18,0	1/1:5,4:9:12.04:549,12,0	1/1:10,7:17:8.63:428,9,0	1/1:10,2:12:6.02:284,6,0
chr10	47557832	.	CTGCTCTGCCAG	C	23482.29	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=5.425;DP=470;FS=5.953;HRun=0;HaplotypeScore=172.6788;InbreedingCoeff=0.8506;MQ=92.42;MQ0=0;MQRankSum=-11.798;QD=58.41;ReadPosRankSum=7.318;VQSLOD=3.8448;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,28:29:39.13:1302,39,0	1/1:1,6:7:12.04:399,12,0	0/0:24,0:24:63.17:0,63,2648	0/0:30,0:30:84.28:0,84,3059	1/1:2,15:17:11.90:232,12,0	1/1:4,17:21:45.15:1552,45,0	1/1:1,29:30:54.19:1776,54,0	0/0:14,0:14:39.13:0,39,1992	1/1:0,14:14:39.13:1353,39,0	1/1:0,11:11:27.06:716,27,0	1/1:5,14:19:9.03:309,9,0	1/1:1,15:16:42.14:1437,42,0	1/1:1,12:13:30.10:1037,30,0	1/1:3,19:22:48.16:1647,48,0	1/1:0,27:27:66.01:2248,66,0	1/1:0,3:3:9.03:312,9,0	1/1:1,18:19:39.13:1348,39,0	1/1:0,16:16:33.11:1106,33,0	1/1:5,9:14:30.10:854,30,0	1/1:1,7:8:6.02:185,6,0	1/1:1,14:15:6.49:209,6,0	1/1:3,13:16:18.06:622,18,0	1/1:4,11:15:15.05:461,15,0	1/1:1,18:19:18.06:621,18,0	1/1:0,13:13:27.09:893,27,0	1/1:0,19:19:54.13:1304,54,0	1/1:1,15:16:36.12:1247,36,0	1/1:0,3:3:9.03:312,9,0
chr10	47558173	.	G	GC	19712.59	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-7.461;DP=529;FS=6.799;HRun=2;HaplotypeScore=45.8840;InbreedingCoeff=0.9971;MQ=86.08;MQ0=0;MQRankSum=-9.601;QD=39.90;ReadPosRankSum=4.053;VQSLOD=4.8677;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,28:28:78.26:1123,78,0	1/1:0,14:14:39.13:561,39,0	0/0:19,0:19:51.14:0,51,609	0/0:16,0:16:48.14:0,48,580	1/1:4,12:16:42.14:604,42,0	1/1:1,17:18:48.15:673,48,0	1/1:1,26:27:72.24:1037,72,0	1/1:3,31:34:93.29:1299,93,0	1/1:0,17:17:45.15:648,45,0	1/1:0,18:18:54.18:777,54,0	1/1:0,13:13:33.11:474,33,0	1/1:0,24:24:72.24:1037,72,0	1/1:1,13:14:39.13:562,39,0	1/1:0,17:17:48.12:667,48,0	1/1:1,15:16:42.14:605,42,0	1/1:1,20:21:57.19:821,57,0	1/1:0,17:17:51.17:734,51,0	1/1:0,19:18:57.19:821,57,0	1/1:2,21:23:69.19:967,69,0	1/1:1,9:10:27.09:389,27,0	1/1:1,17:18:48.16:691,48,0	1/1:1,20:21:60.20:862,60,0	1/1:0,13:13:36.12:517,36,0	1/1:0,23:23:63.21:907,63,0	1/1:0,19:19:54.18:777,54,0	1/1:1,19:20:54.18:777,54,0	1/1:0,26:26:75.25:1080,75,0	1/1:1,7:8:21.07:302,21,0
chr10	47559525	.	T	TGG	15502.42	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=0.884;DP=664;FS=18.383;HRun=2;HaplotypeScore=113.4042;InbreedingCoeff=0.9999;MQ=88.42;MQ0=1;MQRankSum=-5.709;QD=31.38;ReadPosRankSum=3.826;VQSLOD=3.7042;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,108,1565	0/0:10,0:10:30.10:0,30,442	0/0:28,0:28:39.72:0,40,803	0/0:21,0:22:43.84:0,44,670	1/1:20,1:21:60.17:695,60,0	0/0:29,0:29:84.28:0,84,1236	0/0:26,0:26:78.25:0,78,1128	1/1:1,19:20:54.17:981,54,0	1/1:17,0:17:51.14:579,51,0	1/1:26,0:26:78.16:833,78,0	1/1:18,0:18:48.10:537,48,0	1/1:27,0:26:75.21:842,75,0	1/1:26,0:26:69.19:786,69,0	1/1:34,0:33:93.25:1027,93,0	0/0:16,0:16:48.14:0,48,680	1/1:24,0:24:63.17:696,63,0	1/1:28,0:28:81.23:908,81,0	1/1:22,0:22:57.15:628,57,0	1/1:21,0:21:54.13:597,54,0	1/1:19,0:19:54.15:597,54,0	1/1:37,0:37:99:1087,99,0	1/1:26,0:26:69.19:771,69,0	1/1:17,0:17:45.13:508,45,0	1/1:23,0:23:66.18:731,66,0	1/1:20,0:20:48.13:530,48,0	1/1:28,0:28:84.17:879,84,0	1/1:21,0:21:60.18:720,60,0	1/1:19,0:19:51.14:569,51,0
chr10	47559526	.	G	GGA	25684.89	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=-15.254;DP=670;FS=16.944;HRun=0;HaplotypeScore=78.5869;InbreedingCoeff=0.9999;MQ=88.12;MQ0=1;MQRankSum=-5.205;QD=51.47;ReadPosRankSum=4.180;VQSLOD=4.0481;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,108,1626	0/0:10,0:10:30.10:0,30,459	0/0:28,0:28:51.75:0,52,983	0/0:22,0:22:48.56:0,49,707	1/1:2,20:22:60.21:1149,60,0	0/0:30,0:30:87.28:0,87,1305	0/0:26,0:26:78.25:0,78,1172	1/1:19,0:19:51.07:487,51,0	1/1:1,16:18:51.17:980,51,0	1/1:1,24:26:78.27:1488,78,0	1/1:2,16:18:48.16:915,48,0	1/1:1,26:27:75.26:1444,75,0	1/1:1,25:26:69.24:1332,69,0	1/1:1,32:34:93.32:1789,93,0	0/0:16,0:16:48.16:0,48,726	1/1:0,22:22:63.22:1216,63,0	1/1:2,27:29:81.28:1565,81,0	1/1:0,20:20:57.20:1101,57,0	1/1:6,17:23:60.16:1120,60,0	1/1:2,18:20:54.19:1042,54,0	1/1:1,35:36:99:1912,99,0	1/1:0,26:26:69.24:1332,69,0	1/1:0,17:17:45.15:869,45,0	1/1:2,21:23:66.23:1270,66,0	1/1:1,19:21:48.16:927,48,0	1/1:1,28:29:84.29:1609,84,0	1/1:1,21:22:60.21:1155,60,0	1/1:0,19:19:51.17:985,51,0
chr10	47559647	.	TTG	T	1020.52	PASS	AB=0.831;AC=35;AF=0.761;AN=46;BaseQRankSum=4.947;DP=555;FS=10.053;HRun=0;HaplotypeScore=82.7424;InbreedingCoeff=0.2705;MQ=68.30;MQ0=14;MQRankSum=-0.006;QD=2.74;ReadPosRankSum=0.346;VQSLOD=1.0232;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:31,0:39:2.84:14,3,0	1/1:9,0:13:2.77:14,3,0	./.	./.	0/0:14,0:14:3.01:0,3,44	1/1:11,0:19:8.38:39,8,0	1/1:21,0:22:13.50:60,14,0	./.	1/1:11,4:15:11.82:108,12,0	0/1:20,1:20:18.72:19,0,74	0/0:15,0:15:6.01:0,6,69	0/1:8,3:12:35.13:37,0,35	1/1:11,3:15:5.35:45,5,0	1/1:9,0:20:6.57:30,7,0	1/1:10,0:12:2.84:14,3,0	1/1:18,8:28:17.71:156,18,0	1/1:32,5:36:29.47:286,29,0	0/1:11,4:15:42.92:43,0,134	1/1:6,0:7:2.84:14,3,0	1/1:7,0:16:2.69:8,3,0	./.	1/1:10,4:14:6.02:64,6,0	1/1:14,0:14:2.97:20,3,0	1/1:25,11:36:15.04:160,15,0	0/0:10,0:10:2.80:0,3,13	0/0:24,0:24:14.97:0,15,128	1/1:13,0:15:5.68:28,6,0	./.
chr10	47560609	.	TTAAAAA	T	6852.47	PASS	AB=0.761;AC=38;AF=0.679;AN=56;BaseQRankSum=-0.444;DP=283;FS=1.933;HRun=0;HaplotypeScore=64.6360;InbreedingCoeff=0.6828;MQ=59.78;MQ0=0;MQRankSum=-3.789;QD=39.61;ReadPosRankSum=0.052;VQSLOD=4.4691;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:12:30.09:0,30,669	0/0:2,0:2:6.02:0,6,225	0/0:38,0:14:27.46:0,27,566	0/0:27,0:11:25.32:0,25,456	1/1:0,16:16:42.03:667,42,0	0/0:17,0:17:45.15:0,45,1348	0/0:3,0:3:9.02:0,9,244	0/1:11,0:10:99:131,0,182	1/1:0,6:6:15.05:331,15,0	1/1:0,13:13:36.11:825,36,0	1/1:0,10:9:21:424,21,0	1/1:0,6:6:6.02:125,6,0	1/1:3,3:6:16.28:274,16,0	1/1:1,1:1:3.01:73,3,0	0/0:5,0:4:12.01:0,12,344	0/0:5,0:5:12.04:0,12,448	1/1:1,13:14:13.83:466,14,0	0/1:1,11:12:6.38:453,0,6	1/1:0,7:7:21.06:440,21,0	1/1:0,8:7:14.16:223,14,0	1/1:0,2:2:3.01:39,3,0	1/1:0,3:2:3.01:39,3,0	1/1:3,2:4:9.02:136,9,0	1/1:1,3:4:6.02:144,6,0	1/1:1,15:16:36:659,36,0	1/1:0,17:17:45.04:810,45,0	1/1:1,6:6:12.04:291,12,0	1/1:0,6:6:15.05:302,15,0
chr10	47560719	.	C	CAAA	6159.59	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-4.818;DP=310;FS=17.721;HRun=9;HaplotypeScore=65.4635;InbreedingCoeff=0.6197;MQ=61.83;MQ0=9;MQRankSum=-4.019;QD=22.24;ReadPosRankSum=1.949;VQSLOD=1.5748;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,7:11:26.97:390,27,0	1/1:4,0:6:5.98:46,6,0	0/0:17,0:7:9.99:0,10,107	0/0:15,0:9:6.88:0,7,103	1/1:9,8:16:32.92:450,33,0	1/1:1,0:13:31.13:233,31,0	1/1:3,1:14:26.92:243,27,0	1/1:11,0:11:2.11:6,2,0	1/1:6,6:12:24.05:413,24,0	1/1:10,8:20:36.05:566,36,0	1/1:8,4:13:21.03:338,21,0	1/1:5,2:7:11.97:160,12,0	1/1:0,7:7:5.99:80,6,0	1/1:6,7:10:11.99:196,12,0	1/1:4,0:9:13.20:95,13,0	1/1:3,0:7:14.92:112,15,0	1/1:4,3:9:9.01:141,9,0	1/1:0,5:5:9.03:177,9,0	1/1:7,5:9:18.01:280,18,0	1/1:9,3:10:14.97:217,15,0	1/1:1,1:3:7.55:83,8,0	1/1:2,4:6:15.01:256,15,0	1/1:4,4:7:17.98:273,18,0	1/1:2,2:3:8.99:126,9,0	1/1:4,6:9:20.99:330,21,0	1/1:8,8:18:10.97:378,11,0	1/1:5,5:13:24:362,24,0	1/1:0,7:9:12.04:207,12,0
chr10	47560800	.	AACATACAC	A	2169.60	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=3.238;DP=469;FS=0.716;HRun=0;HaplotypeScore=164.0902;InbreedingCoeff=0.8050;MQ=55.12;MQ0=2;MQRankSum=-5.181;QD=31.44;ReadPosRankSum=2.585;VQSLOD=3.1757;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:36.12:0,36,1327	1/1:2,5:7:12.04:315,12,0	0/0:32,0:27:75.10:0,75,2409	0/0:25,0:12:21.32:0,21,600	0/0:25,0:26:41.45:0,41,448	1/1:9,3:14:33.07:767,33,0	1/1:7,9:16:15.05:403,15,0	0/0:24,0:24:66.14:0,66,2457	0/0:21,0:20:45.09:0,45,1607	0/0:11,0:11:29.99:0,30,368	0/0:13,0:13:11.77:0,12,100	0/0:16,0:15:30.10:0,30,1074	0/0:10,0:10:12.04:0,12,414	0/0:14,0:14:21.07:0,21,629	1/1:6,1:7:18.05:437,18,0	1/1:12,0:12:12.10:408,12,0	0/0:9,0:9:23.98:0,24,380	0/0:10,0:10:3:0,3,26	0/0:24,0:24:66.05:0,66,1663	0/0:18,0:18:48.16:0,48,1105	0/0:23,0:23:9:0,9,162	0/0:11,0:11:30.10:0,30,1124	0/0:16,0:16:30.09:0,30,989	0/0:35,0:35:54.16:0,54,1889	0/1:12,0:12:10.11:10,0,144	0/0:18,0:18:50.48:0,50,828	0/0:17,0:15:40.69:0,41,946	0/0:5,0:4:8.96:0,9,68
chr10	47560802	.	CAT	C	605.44	PASS	AB=1.000;AC=14;AF=0.250;AN=56;BaseQRankSum=7.973;DP=474;FS=8.455;HRun=0;HaplotypeScore=131.8433;InbreedingCoeff=0.5427;MQ=54.34;MQ0=3;MQRankSum=-7.165;QD=5.50;ReadPosRankSum=1.296;VQSLOD=2.8360;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:41.93:0,42,382	1/1:5,2:7:11.97:104,12,0	0/0:31,0:25:68.08:0,68,1095	0/0:24,0:12:8.16:0,8,231	0/1:26,0:26:22.42:22,0,67	1/1:8,6:14:32.95:300,33,0	1/1:9,6:15:15.02:143,15,0	0/0:23,0:23:66.12:0,66,983	0/0:22,0:21:26.48:0,26,546	0/0:12,0:12:2.92:0,3,37	0/1:13,0:13:4.13:4,0,16	0/0:16,0:15:30.08:0,30,358	0/0:10,0:10:12.03:0,12,131	0/0:14,0:14:20.55:0,21,242	1/1:5,3:7:18.03:178,18,0	0/0:12,0:12:17.20:0,17,54	0/0:9,0:9:4.97:0,5,44	1/1:10,0:10:1.55:4,2,0	0/0:24,0:24:62.16:0,62,690	0/0:19,0:19:45.42:0,45,419	0/0:23,0:23:9:0,9,89	0/0:11,0:11:30.09:0,30,414	0/0:16,0:16:30.07:0,30,321	0/0:35,0:35:54.13:0,54,618	0/1:12,0:12:11.90:12,0,12	0/0:19,0:19:6.31:0,6,164	0/0:18,0:16:40.29:0,40,407	0/1:5,0:4:1.43:1,0,18
chr10	47560804	.	T	TAC	2691.46	PASS	AB=1.000;AC=13;AF=0.241;AN=54;BaseQRankSum=-4.766;DP=482;FS=5.807;HRun=0;HaplotypeScore=128.6985;InbreedingCoeff=0.7542;MQ=55.22;MQ0=3;MQRankSum=5.272;QD=19.50;ReadPosRankSum=0.811;VQSLOD=3.9038;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:26:19.13:247,0,19	0/0:7,0:7:8.48:0,8,41	0/0:32,0:26:17.43:0,17,265	0/0:27,0:14:0.28:0,0,69	0/0:26,0:26:20.60:0,21,103	0/0:14,0:14:22.70:0,23,124	0/0:15,0:15:14.20:0,14,70	0/0:25,0:25:48.62:0,49,394	1/1:14,7:20:47.98:584,48,0	0/0:12,0:12:24.29:0,24,136	0/0:13,0:13:4.97:0,5,19	1/1:3,14:16:14.08:384,14,0	1/1:1,11:12:12.04:192,12,0	0/0:16,0:16:17.94:0,18,142	0/0:8,0:7:13.85:0,14,91	0/0:12,0:12:25.57:0,26,126	0/0:9,0:9:14.41:0,14,93	0/0:10,0:10:5.84:0,6,40	0/0:22,0:22:35.27:0,35,273	0/0:20,0:20:13.53:0,14,218	./.	1/1:7,4:11:29.90:327,30,0	1/1:2,14:16:27.09:431,27,0	1/1:4,31:35:36.16:708,36,0	0/0:12,0:12:14.13:0,14,72	0/0:18,0:18:26.08:0,26,153	0/0:18,0:16:40.27:0,40,287	0/0:4,0:3:5.68:0,6,29
chr10	47560812	.	CACACACACAGAG	C	3120.82	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=-2.817;DP=522;FS=2.353;HRun=0;HaplotypeScore=193.3190;InbreedingCoeff=0.7686;MQ=56.18;MQ0=11;MQRankSum=-5.804;QD=41.06;ReadPosRankSum=1.124;VQSLOD=3.4709;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:48.16:0,48,2236	1/1:9,0:9:18.01:411,18,0	0/0:45,0:25:69.22:0,69,2348	0/0:42,0:20:44:0,44,1015	0/0:26,0:26:42.09:0,42,504	1/1:15,0:15:30.02:848,30,0	1/1:17,0:17:17.98:525,18,0	0/0:25,0:23:66.23:0,66,2562	0/0:20,0:19:48.16:0,48,2013	0/1:12,0:12:15.68:16,0,301	0/0:13,0:13:12.01:0,12,113	0/0:18,0:17:33.11:0,33,1433	0/0:13,0:13:18.06:0,18,741	0/0:17,0:17:21.07:0,21,573	1/1:11,0:10:23.79:457,24,0	1/1:0,12:12:26.98:1039,27,0	0/0:11,0:11:5.47:0,5,318	0/0:9,0:9:3:0,3,29	0/0:18,0:18:51.15:0,51,1306	0/0:22,0:22:48.09:0,48,1066	0/0:25,0:25:3.01:0,3,99	0/0:11,0:11:30.10:0,30,1218	0/0:15,0:15:27.09:0,27,1288	0/0:37,0:37:57.20:0,57,2558	0/0:12,0:12:19.48:0,19,196	0/0:15,0:15:45.11:0,45,700	0/0:18,0:16:43.70:0,44,1029	0/0:5,0:4:6.01:0,6,59
chr10	47560814	.	CACACACAGAG	C	2333.25	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=0.855;DP=535;FS=0.000;HRun=0;HaplotypeScore=185.7002;InbreedingCoeff=0.5902;MQ=58.76;MQ0=14;MQRankSum=-5.135;QD=21.60;ReadPosRankSum=0.468;VQSLOD=2.7417;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:48.16:0,48,1841	1/1:7,2:9:17.99:297,18,0	0/0:51,0:26:72.02:0,72,1868	0/0:46,0:21:43.55:0,44,818	0/0:26,0:26:26.40:0,26,173	1/1:10,5:16:32.99:652,33,0	1/1:12,6:18:17.98:385,18,0	0/0:25,0:23:66.23:0,66,1992	0/0:21,0:20:48.16:0,48,1628	0/1:12,0:12:48.75:49,0,79	0/0:11,0:11:5.50:0,6,16	0/0:18,0:17:33.11:0,33,1170	0/0:13,0:13:18.06:0,18,592	0/0:18,0:18:21.05:0,21,398	1/1:10,3:12:26.80:361,27,0	1/1:12,0:12:27.09:689,27,0	0/0:11,0:11:3.36:0,3,148	0/0:8,0:8:1.25:0,1,3	0/0:17,0:17:45.09:0,45,871	0/0:22,0:22:44.71:0,45,658	0/0:25,0:25:3.01:0,3,74	0/0:12,0:12:33.09:0,33,989	0/0:14,0:14:27.09:0,27,1062	0/0:38,0:38:57.67:0,58,2081	0/1:12,0:12:23.98:24,0,39	0/1:16,0:16:54.43:54,0,242	0/0:18,0:16:43.38:0,43,649	0/0:5,0:4:2.49:0,2,6
chr10	47560818	.	CACAGAG	C	5807.15	PASS	AB=1.000;AC=30;AF=0.536;AN=56;BaseQRankSum=0.657;DP=551;FS=2.920;HRun=0;HaplotypeScore=148.2512;InbreedingCoeff=0.6371;MQ=63.14;MQ0=14;MQRankSum=-8.702;QD=24.00;ReadPosRankSum=3.495;VQSLOD=4.4784;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:28:48.16:0,48,925	1/1:8,0:8:16.73:222,17,0	0/0:56,0:25:65.52:0,66,791	0/0:53,0:25:37.40:0,37,452	1/1:3,20:24:33.11:705,33,0	1/1:17,0:17:31.98:456,32,0	1/1:16,0:16:21.06:320,21,0	0/0:28,0:26:66.49:0,66,888	0/0:20,0:19:48.07:0,48,836	1/1:0,14:14:35.85:600,36,0	1/1:1,10:11:9.03:211,9,0	0/0:18,0:17:33.08:0,33,629	0/0:15,0:15:17.93:0,18,296	0/1:18,0:18:74.01:89,0,74	1/1:14,0:13:26.58:306,27,0	1/1:12,0:12:27.09:438,27,0	1/1:10,2:12:24.05:368,24,0	1/1:0,8:8:3.01:73,3,0	0/1:15,0:15:99:123,0,180	0/1:23,0:23:56.82:385,0,57	0/0:26,0:26:3:0,3,25	0/0:12,0:12:30.49:0,30,455	0/0:14,0:14:27.09:0,27,593	0/0:39,0:39:57.63:0,58,1103	1/1:0,9:11:18.06:372,18,0	1/1:2,14:16:19:616,19,0	0/1:18,0:16:77.79:376,0,78	1/1:0,5:4:6.02:146,6,0
chr10	47560820	.	CAGAGAG	C	4522.27	PASS	AC=34;AF=0.630;AN=54;BaseQRankSum=-1.384;DP=546;FS=1.824;HRun=0;HaplotypeScore=152.9089;InbreedingCoeff=0.8766;MQ=63.91;MQ0=12;MQRankSum=-8.283;QD=19.49;ReadPosRankSum=2.766;VQSLOD=4.5479;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:48.16:0,48,1295	1/1:8,0:8:9.35:120,9,0	0/0:58,0:27:26.31:0,26,481	0/0:51,0:24:32.56:0,33,436	1/1:23,0:23:33.10:536,33,0	1/1:17,0:17:23.94:303,24,0	1/1:15,0:15:20.50:187,20,0	0/0:31,0:29:42.07:0,42,802	0/0:21,0:20:39.07:0,39,704	1/1:14,0:14:6.32:319,6,0	1/1:11,0:11:9.03:160,9,0	0/0:17,0:17:30.10:0,30,610	0/0:15,0:15:18.06:0,18,331	1/1:5,12:17:6.02:129,6,0	1/1:14,0:13:9.39:139,9,0	1/1:12,0:12:27.06:284,27,0	1/1:11,0:11:17.69:203,18,0	1/1:8,0:8:3.01:51,3,0	1/1:10,3:13:9.03:193,9,0	1/1:4,17:21:27.09:578,27,0	./.	0/0:12,0:12:21.05:0,21,349	0/0:14,0:14:27.09:0,27,597	0/0:40,0:40:63.19:0,63,1219	1/1:11,0:11:18.06:299,18,0	1/1:14,0:14:7.03:332,7,0	1/1:6,12:17:27.09:579,27,0	1/1:5,0:4:6.02:109,6,0
chr10	47560989	.	TGTATACACTTTA	T	1644.51	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.826;DP=610;FS=4.788;HRun=0;HaplotypeScore=238.2018;InbreedingCoeff=0.9927;MQ=81.37;MQ0=0;MQRankSum=-4.243;QD=71.50;ReadPosRankSum=-1.384;VQSLOD=2.7348;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,120,7097	0/0:8,0:8:21.07:0,21,963	0/0:15,0:14:36.12:0,36,1766	0/0:27,0:27:75.25:0,75,3830	0/0:23,0:23:54.17:0,54,2968	0/0:23,0:23:63.19:0,63,3667	0/0:33,0:33:93.28:0,93,4937	1/1:6,17:23:51.16:1739,51,0	0/0:18,0:18:51.16:0,51,2835	0/0:22,0:21:54.09:0,54,2523	0/0:20,0:19:42.14:0,42,2429	0/0:25,0:25:75.26:0,75,4572	0/0:12,0:12:24.08:0,24,1392	0/0:19,0:19:57.20:0,57,3403	0/0:25,0:25:72.25:0,72,3996	0/0:21,0:21:60.21:0,60,3586	0/0:26,0:26:78.27:0,78,4260	0/0:11,0:11:30.10:0,30,1744	0/0:24,0:24:69.24:0,69,3526	0/0:18,0:17:45.15:0,45,2531	0/0:29,0:29:87.28:0,87,4351	0/0:15,0:14:39.13:0,39,2295	0/0:11,0:10:30.10:0,30,1607	0/0:27,0:27:81.24:0,81,4406	0/0:21,0:21:60.18:0,60,3204	0/0:27,0:27:78.26:0,78,4412	0/0:28,0:28:78.27:0,78,4091	0/0:18,0:18:54.19:0,54,3017
chr10	47561112	.	CA	C	11867.45	PASS	AB=0.900;AC=49;AF=0.875;AN=56;BaseQRankSum=-6.378;DP=613;FS=1.485;HRun=9;HaplotypeScore=102.8640;InbreedingCoeff=0.8117;MQ=72.65;MQ0=0;MQRankSum=-2.027;QD=22.14;ReadPosRankSum=3.120;VQSLOD=4.9959;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,144,1651	1/1:0,12:12:33.02:302,33,0	0/1:16,1:18:25.71:26,0,188	0/0:9,1:10:12.43:0,12,101	1/1:1,21:22:57.03:522,57,0	1/1:4,15:19:42.02:384,42,0	1/1:6,19:25:54.02:494,54,0	0/0:16,1:17:17.67:0,18,449	1/1:2,19:21:57.03:522,57,0	1/1:0,22:22:63.03:576,63,0	1/1:5,10:15:30.01:275,30,0	1/1:4,21:25:60.03:549,60,0	1/1:4,20:24:57.03:522,57,0	1/1:1,14:15:39.02:357,39,0	1/1:4,15:20:12.44:356,12,0	1/1:1,22:24:68.07:610,68,0	1/1:1,21:22:60.03:549,60,0	1/1:1,18:19:48.02:439,48,0	1/1:0,20:20:60.03:549,60,0	1/1:0,16:16:36.01:329,36,0	1/1:3,34:37:92.97:840,93,0	1/1:4,24:28:38.46:525,38,0	1/1:4,11:15:30.01:275,30,0	1/1:2,30:32:87.05:796,87,0	1/1:1,18:19:51.03:467,51,0	1/1:1,14:17:46.10:396,46,0	1/1:3,40:43:99:1071,117,0	1/1:0,6:6:15.01:137,15,0
chr10	47562395	.	AACACACACACACACACACACGC	A	3759.90	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=-3.704;DP=516;FS=10.112;HRun=0;HaplotypeScore=247.9600;InbreedingCoeff=-0.0917;MQ=62.24;MQ0=14;MQRankSum=1.253;QD=9.77;ReadPosRankSum=1.061;VQSLOD=1.2940;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:35,0:35:84.62:85,0,1772	0/0:9,0:9:9.03:0,9,267	0/0:40,0:19:4.23:0,4,66	0/1:34,0:20:17.80:18,0,114	0/0:13,0:12:3.01:0,3,35	0/1:17,0:17:60.90:61,0,381	0/1:27,0:26:80.68:81,0,571	1/1:12,0:10:14.95:123,15,0	0/1:12,0:12:9.08:9,0,174	0/1:21,0:21:84.02:84,0,284	1/1:10,0:10:3.01:77,3,0	0/1:13,0:12:49.21:49,0,230	0/0:10,0:10:3.01:0,3,41	1/1:7,11:18:9.03:523,9,0	0/0:33,0:33:11.62:0,12,163	1/1:9,0:22:15.05:776,15,0	0/1:24,0:24:70.86:71,0,97	1/1:16,0:16:9.03:230,9,0	1/1:10,0:10:14.92:116,15,0	1/1:0,7:7:6.02:195,6,0	0/1:25,0:24:3.90:124,0,4	0/0:13,0:13:3.01:0,3,72	0/0:13,0:12:5.59:0,6,118	0/1:20,0:20:43.19:43,0,245	0/1:15,0:15:62.34:317,0,62	0/1:18,0:18:99:204,0,234	1/1:1,20:21:8.77:526,9,0	0/1:8,0:7:50.02:50,0,55
chr10	47562398	.	ACACACACACACACACACG	A	5179.61	PASS	AB=0.959;AC=38;AF=0.679;AN=56;BaseQRankSum=-0.717;DP=526;FS=9.462;HRun=0;HaplotypeScore=213.7045;InbreedingCoeff=-0.1110;MQ=60.61;MQ0=14;MQRankSum=-0.424;QD=11.16;ReadPosRankSum=1.244;VQSLOD=2.9008;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:37,0:37:99:115,0,1239	0/0:9,0:9:9.03:0,9,124	0/0:39,0:18:3.57:0,4,37	0/1:32,0:18:17.83:18,0,91	1/1:4,7:10:3.01:36,3,0	0/1:18,0:18:85.93:169,0,86	0/1:24,1:24:99:141,0,171	0/1:14,0:12:61.18:112,0,61	0/1:10,0:10:26.45:57,0,26	1/1:24,1:25:37.35:481,37,0	1/1:0,10:10:3.01:147,3,0	0/1:13,0:12:17.51:178,0,18	1/1:14,0:14:2.68:11,3,0	1/1:17,0:17:9.03:382,9,0	1/1:36,0:36:10.71:46,11,0	1/1:21,0:21:15.05:637,15,0	0/1:8,17:25:78.12:142,0,78	1/1:6,12:18:9.03:444,9,0	1/1:9,0:9:14.92:116,15,0	1/1:7,0:7:5.98:104,6,0	0/1:25,0:24:3.92:100,0,4	0/0:14,0:14:3.01:0,3,31	0/1:15,0:14:6.14:6,0,22	0/1:20,0:20:60.21:100,0,60	1/1:12,3:15:32.97:648,33,0	0/1:17,1:18:98.82:457,0,99	1/1:21,0:21:8.70:384,9,0	1/1:8,0:7:17.95:148,18,0
chr10	47562400	.	ACACACACACACACACG	A	5546.44	PASS	AB=0.995;AC=42;AF=0.750;AN=56;BaseQRankSum=-1.187;DP=520;FS=0.683;HRun=0;HaplotypeScore=196.0851;InbreedingCoeff=-0.0812;MQ=60.42;MQ0=14;MQRankSum=-0.720;QD=11.20;ReadPosRankSum=1.102;VQSLOD=3.9400;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:38,0:38:99:126,0,1135	0/0:9,0:9:8.86:0,9,57	0/1:38,0:17:23.94:25,0,24	0/1:32,0:18:17.83:18,0,91	1/1:10,0:9:2.94:18,3,0	0/1:18,0:18:1.52:273,0,2	0/1:25,0:24:37.70:200,0,38	0/1:13,0:11:41.47:115,0,41	0/1:9,0:9:3.29:109,0,3	1/1:5,21:26:56.81:630,57,0	1/1:10,0:10:3.01:115,3,0	1/1:13,0:12:10.54:340,11,0	1/1:14,0:14:3.01:37,3,0	1/1:17,0:17:9.03:340,9,0	1/1:35,0:35:12.04:150,12,0	1/1:21,0:21:15.05:567,15,0	0/1:23,0:23:54.56:109,0,55	1/1:18,0:18:9.03:345,9,0	1/1:8,0:8:14.92:116,15,0	1/1:8,0:8:5.80:88,6,0	0/1:24,0:23:3.92:100,0,4	0/0:16,0:16:3:0,3,29	1/1:15,0:14:2.31:36,2,0	1/1:20,0:20:2.32:161,2,0	1/1:14,0:14:32.91:575,33,0	0/1:17,1:18:77.37:470,0,77	1/1:21,0:21:8.71:342,9,0	1/1:7,0:6:17.94:143,18,0
chr10	47562402	.	ACACACACACACACG	A	6074.80	PASS	AB=1.000;AC=49;AF=0.875;AN=56;BaseQRankSum=-2.022;DP=510;FS=3.993;HRun=0;HaplotypeScore=178.1575;InbreedingCoeff=-0.1325;MQ=59.61;MQ0=14;MQRankSum=0.841;QD=11.91;ReadPosRankSum=2.441;VQSLOD=3.7973;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:39,0:39:99:131,0,773	1/1:9,0:9:5.94:43,6,0	0/1:36,0:15:23.94:25,0,24	0/1:31,0:17:17.83:18,0,91	1/1:10,0:9:2.94:18,3,0	1/1:17,1:18:33.43:405,33,0	1/1:23,1:23:35.50:344,36,0	0/1:12,0:10:31.94:117,0,32	1/1:10,0:10:14.07:199,14,0	1/1:24,0:24:56.80:558,57,0	1/1:10,0:10:3.01:101,3,0	1/1:11,2:12:26.12:515,26,0	1/1:14,0:14:3.01:63,3,0	1/1:16,0:16:9.03:298,9,0	1/1:36,0:36:10.17:251,10,0	1/1:19,0:19:15.05:497,15,0	0/1:22,0:22:51.18:95,0,51	1/1:16,0:16:9.03:303,9,0	1/1:7,0:7:14.92:116,15,0	1/1:8,0:8:5.94:74,6,0	0/1:23,0:22:3.92:100,0,4	1/1:17,0:17:0.47:1,0,0	1/1:17,0:16:5.67:88,6,0	1/1:18,1:19:23.93:349,24,0	1/1:14,0:14:32.91:500,33,0	0/1:18,0:18:61.20:423,0,61	1/1:21,0:21:8.70:300,9,0	1/1:7,0:6:17.94:143,18,0
chr10	47562404	.	ACACACACACACG	A	6565.54	PASS	AB=1.000;AC=49;AF=0.875;AN=56;BaseQRankSum=-3.032;DP=497;FS=2.808;HRun=0;HaplotypeScore=159.4673;InbreedingCoeff=-0.1887;MQ=55.23;MQ0=14;MQRankSum=1.596;QD=13.21;ReadPosRankSum=2.304;VQSLOD=3.4020;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:39,0:39:99:158,0,418	1/1:7,0:7:8.94:68,9,0	0/1:34,0:13:23.94:25,0,24	0/1:28,0:14:17.83:18,0,91	1/1:9,0:8:2.94:18,3,0	1/1:17,1:18:35.96:441,36,0	1/1:21,2:22:42.41:547,42,0	0/1:12,0:10:15.31:118,0,15	1/1:9,2:11:17.29:379,17,0	1/1:24,0:24:56.79:530,57,0	1/1:10,0:10:3.01:87,3,0	1/1:12,2:13:30.49:608,30,0	1/1:0,14:14:3.01:108,3,0	1/1:15,0:15:9.03:256,9,0	1/1:4,32:36:10.50:428,10,0	1/1:19,0:19:15.05:427,15,0	0/1:21,0:21:27.74:81,0,28	1/1:16,0:16:9.03:262,9,0	1/1:7,0:7:14.92:116,15,0	1/1:8,0:8:5.94:60,6,0	0/1:21,0:20:3.92:100,0,4	1/1:3,13:16:3.01:37,3,0	1/1:4,12:15:6.05:158,6,0	1/1:20,0:20:8.95:293,9,0	1/1:13,0:13:32.91:448,33,0	0/1:18,0:18:49.36:395,0,49	1/1:21,0:21:8.70:258,9,0	1/1:7,0:6:17.94:143,18,0
chr10	47562414	.	ACG	A	4685.30	PASS	AB=1.000;AC=53;AF=0.946;AN=56;BaseQRankSum=-2.149;DP=484;FS=16.074;HRun=0;HaplotypeScore=114.6751;InbreedingCoeff=-0.0804;MQ=49.10;MQ0=17;MQRankSum=2.915;QD=9.68;ReadPosRankSum=1.348;VQSLOD=3.4194;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:40,0:40:75.25:596,75,0	1/1:6,0:6:11.93:93,12,0	0/1:25,0:7:23.93:25,0,24	0/1:20,0:8:17.83:18,0,91	1/1:9,0:8:2.94:18,3,0	1/1:23,0:23:50.84:406,51,0	1/1:30,0:29:59.82:483,60,0	1/1:9,4:11:13.04:183,13,0	1/1:15,0:15:23.90:186,24,0	1/1:22,0:22:56.71:439,57,0	1/1:10,0:10:2.92:17,3,0	1/1:19,0:18:42.67:322,43,0	1/1:14,0:14:2.97:20,3,0	1/1:11,1:12:8.79:55,9,0	1/1:34,0:33:11.75:78,12,0	1/1:13,0:13:14.51:79,15,0	1/1:18,0:18:5.93:54,6,0	1/1:12,0:12:8.77:52,9,0	1/1:5,0:5:14.92:116,15,0	1/1:8,0:8:5.61:29,6,0	0/1:17,0:14:3.91:100,0,4	1/1:13,0:13:2.92:17,3,0	1/1:14,1:14:5.85:41,6,0	1/1:27,0:27:38.80:305,39,0	1/1:13,0:13:35.64:263,36,0	1/1:24,0:23:59.01:498,59,0	1/1:20,0:20:8.30:49,8,0	1/1:7,0:6:17.94:143,18,0
chr10	47562565	.	CTAGACTGT	C	628.30	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.683;DP=718;FS=0.000;HRun=0;HaplotypeScore=176.3688;InbreedingCoeff=0.9996;MQ=84.05;MQ0=0;MQRankSum=-1.261;QD=31.41;ReadPosRankSum=-3.261;VQSLOD=2.3999;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,129,5416	0/0:15,0:15:45.15:0,45,1705	0/0:19,0:19:43.50:0,43,1929	0/0:26,0:26:48.76:0,49,1904	0/0:26,0:26:72.25:0,72,3085	0/0:32,0:32:87.30:0,87,3567	0/0:24,0:24:69.24:0,69,2776	1/1:8,12:19:33.06:723,33,0	0/0:23,0:23:60.21:0,60,2587	0/0:29,0:29:72.24:0,72,2820	0/0:29,0:29:75.26:0,75,3017	0/0:24,0:24:57.20:0,57,2452	0/0:19,0:19:51.18:0,51,2072	0/0:24,0:24:63.17:0,63,2500	0/0:31,0:31:78.27:0,78,3181	0/0:17,0:17:45.12:0,45,1830	0/0:32,0:32:84.29:0,84,3425	0/0:21,0:21:60.21:0,60,2495	0/0:32,0:32:84.29:0,84,3461	0/0:15,0:15:39.12:0,39,1514	0/0:23,0:23:60.21:0,60,2568	0/0:34,0:34:93.28:0,93,3821	0/0:25,0:25:66.23:0,66,2823	0/0:20,0:20:48.16:0,48,1930	0/0:25,0:25:54.19:0,54,2284	0/0:30,0:30:75.25:0,75,2928	0/0:29,0:29:87.30:0,87,3636	0/0:28,0:28:84.29:0,84,3199
chr10	47563200	.	CGTTTGGTTTTGTTTT	C	4801.98	PASS	AB=1.000;AC=27;AF=0.482;AN=56;BaseQRankSum=-1.620;DP=393;FS=24.362;HRun=0;HaplotypeScore=161.0061;InbreedingCoeff=0.8428;MQ=68.92;MQ0=6;MQRankSum=-3.070;QD=36.94;ReadPosRankSum=1.392;VQSLOD=2.8777;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:63:0,63,1520	0/0:10,0:10:27.04:0,27,572	0/0:45,0:27:58.19:0,58,1072	0/0:55,0:27:32.54:0,33,552	1/1:0,15:15:35.49:391,35,0	0/0:15,0:14:36.06:0,36,795	0/0:9,0:9:24:0,24,615	0/1:28,0:28:99:416,0,144	0/0:17,0:17:36.04:0,36,934	1/1:0,10:10:24.94:666,25,0	1/1:0,2:2:3.01:132,3,0	0/0:18,0:17:47.97:0,48,1148	0/0:10,0:10:30.07:0,30,838	1/1:0,5:5:6.02:265,6,0	0/0:15,0:15:39.09:0,39,907	0/0:9,0:9:24.07:0,24,743	1/1:5,1:6:17.95:338,18,0	1/1:2,5:7:9.03:398,9,0	1/1:2,11:11:27.03:598,27,0	1/1:0,8:8:17.90:356,18,0	1/1:9,1:10:23.89:190,24,0	0/0:9,0:9:24.02:0,24,414	0/0:9,0:9:27.07:0,27,644	0/0:17,0:17:41.93:0,42,1084	1/1:0,9:9:9.03:397,9,0	1/1:1,6:7:14.92:328,15,0	1/1:7,0:7:20.96:196,21,0	1/1:0,3:3:3.01:133,3,0
chr10	47563205	.	GGTTTT	G	4183.29	PASS	AC=48;AF=0.923;AN=52;BaseQRankSum=-0.300;DP=378;FS=0.000;HRun=0;HaplotypeScore=95.9453;InbreedingCoeff=0.4843;MQ=69.92;MQ0=7;MQRankSum=-0.100;QD=16.09;ReadPosRankSum=5.183;VQSLOD=2.8664;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:18,6:24:15.50:485,15,0	1/1:7,3:10:14.97:207,15,0	0/0:43,1:24:6.47:0,6,108	0/0:58,0:28:17.59:0,18,258	1/1:15,0:15:1.97:33,2,0	1/1:8,4:11:15.03:243,15,0	1/1:8,4:12:18:264,18,0	1/1:26,0:26:0.94:2,1,0	1/1:4,11:15:21.07:384,21,0	1/1:10,0:10:12.04:140,12,0	1/1:2,0:2:3.01:35,3,0	1/1:11,6:16:20.99:317,21,0	1/1:5,5:10:15.05:274,15,0	1/1:5,0:5:6.02:70,6,0	1/1:7,6:13:21.02:319,21,0	1/1:1,7:8:21.07:381,21,0	1/1:6,0:6:5.91:51,6,0	1/1:5,0:5:9.03:105,9,0	1/1:11,0:9:9.03:105,9,0	1/1:8,0:8:6.02:70,6,0	./.	1/1:7,0:7:5.93:72,6,0	1/1:6,4:10:14.97:228,15,0	1/1:12,4:16:11.98:189,12,0	1/1:9,0:9:9.03:105,9,0	1/1:6,0:6:5.81:70,6,0	./.	1/1:3,0:3:3.01:35,3,0
chr10	47563271	.	C	CCCT	2864.76	PASS	AB=1.000;AC=42;AF=0.750;AN=56;BaseQRankSum=0.824;DP=241;FS=10.393;HRun=0;HaplotypeScore=79.2579;InbreedingCoeff=0.4576;MQ=80.75;MQ0=2;MQRankSum=-3.543;QD=18.25;ReadPosRankSum=5.562;VQSLOD=2.2858;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:27:53.77:417,54,0	1/1:3,0:3:8.95:68,9,0	0/0:30,0:25:30.85:0,31,744	0/0:30,0:23:32.49:0,32,649	1/1:8,0:8:2.97:21,3,0	1/1:6,0:6:17.92:140,18,0	1/1:12,0:12:17.94:140,18,0	0/0:19,0:19:41.99:0,42,221	1/1:5,2:7:15.05:234,15,0	0/1:4,0:4:16.77:17,0,57	1/1:3,0:3:2.94:18,3,0	1/1:3,6:9:18:338,18,0	1/1:1,3:4:12.04:230,12,0	0/1:3,0:3:0.22:28,0,0	1/1:11,0:11:26.83:212,27,0	1/1:12,0:12:32.49:243,32,0	0/1:5,0:5:15.74:16,0,45	0/0:1,0:1:3.01:0,3,33	0/0:2,0:2:2.22:0,2,7	1/1:2,0:2:2.97:20,3,0	1/1:5,0:5:3:29,3,0	1/1:3,8:10:18.06:379,18,0	1/1:4,2:6:6.02:112,6,0	1/1:4,5:9:15.05:319,15,0	1/1:2,0:2:2.04:6,2,0	1/1:3,0:3:4.65:19,5,0	1/1:4,0:4:4.96:18,5,0	0/1:1,0:1:0:0,0,0
chr10	47563272	.	C	CCT	3521.24	PASS	AB=0.795;AC=44;AF=0.815;AN=54;BaseQRankSum=1.729;DP=252;FS=9.363;HRun=0;HaplotypeScore=75.3211;InbreedingCoeff=0.3018;MQ=79.24;MQ0=2;MQRankSum=-5.780;QD=18.73;ReadPosRankSum=5.769;VQSLOD=2.5503;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,24:29:54.18:934,54,0	1/1:1,2:3:8.99:125,9,0	0/0:31,0:24:60.63:0,61,718	0/0:31,0:23:41.51:0,42,575	1/1:7,0:8:2.90:16,3,0	1/1:1,5:6:18.01:283,18,0	1/1:0,11:11:18.06:313,18,0	0/1:19,0:19:35.11:35,0,111	1/1:6,0:6:13.25:106,13,0	0/1:3,0:5:11.04:11,0,54	1/1:2,0:2:2.60:10,3,0	1/1:9,0:9:17.96:158,18,0	1/1:4,0:4:12.02:123,12,0	0/1:3,0:4:5.05:25,0,5	1/1:4,9:13:26.93:402,27,0	1/1:4,10:14:35.65:539,36,0	0/1:3,0:6:12.22:12,0,53	0/0:1,0:1:3.01:0,3,45	1/1:1,0:1:2.68:11,3,0	1/1:1,0:2:2.60:10,3,0	1/1:0,0:8:2.04:6,2,0	1/1:11,0:10:18.01:163,18,0	1/1:6,0:6:6.01:76,6,0	1/1:9,0:9:15.01:139,15,0	1/1:2,0:3:1.55:4,2,0	1/1:2,0:4:0.11:10,0,0	1/1:1,0:5:2.57:8,3,0	./.
chr10	47563274	.	C	CA	300.46	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=1.998;DP=250;FS=5.395;HRun=0;HaplotypeScore=81.2626;InbreedingCoeff=0.4495;MQ=79.61;MQ0=2;MQRankSum=-3.816;QD=4.93;ReadPosRankSum=-1.037;VQSLOD=2.8363;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:57.13:0,57,331	0/0:3,0:3:8.77:0,9,54	0/0:34,0:25:48.97:0,49,637	0/0:31,0:23:42.71:0,43,523	1/1:8,0:8:2.68:11,3,0	0/0:6,0:6:17.86:0,18,126	0/0:11,0:11:17.24:0,17,106	1/1:9,9:18:32.52:346,33,0	0/0:6,0:6:14.85:0,15,105	1/1:5,0:5:3.53:41,4,0	0/0:2,0:2:0.89:0,1,2	0/0:7,0:7:16.95:0,17,90	0/0:4,0:4:11.64:0,12,70	0/1:4,0:4:0.73:3,0,1	0/0:14,0:14:30.88:0,31,195	0/0:14,0:14:36.39:0,36,241	0/1:7,0:7:1.33:1,0,18	0/0:2,0:2:2.88:0,3,15	0/0:1,0:1:2.88:0,3,15	1/1:2,0:2:2.74:12,3,0	1/1:6,0:6:2.60:10,3,0	0/0:11,0:10:17.06:0,17,94	0/0:5,0:5:8.70:0,9,55	0/0:8,0:8:14.53:0,15,93	0/1:2,0:2:4.67:5,0,21	0/1:4,0:4:0.14:0,0,9	0/1:5,0:5:7.53:8,0,18	0/0:1,0:1:0:0,0,0
chr10	47563279	.	C	CT	228.74	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=2.205;DP=246;FS=5.882;HRun=0;HaplotypeScore=80.4187;InbreedingCoeff=0.4812;MQ=77.22;MQ0=3;MQRankSum=-3.918;QD=9.15;ReadPosRankSum=-1.066;VQSLOD=3.2293;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:41.77:0,42,205	0/0:2,0:2:5.19:0,5,19	0/0:32,0:23:60.72:0,61,690	0/0:27,0:20:40.92:0,41,531	0/0:7,0:7:0.26:0,0,1	0/0:5,0:5:14.03:0,14,71	0/0:8,0:8:16.75:0,17,87	1/1:9,9:19:38.11:321,38,0	0/0:6,0:6:13.81:0,14,75	0/0:6,0:6:16.93:0,17,112	0/0:2,0:2:1.82:0,2,5	0/0:8,0:8:15.44:0,15,82	0/0:4,0:4:9.52:0,10,40	0/0:4,0:4:4.50:0,4,16	0/0:12,0:12:24.23:0,24,133	0/0:16,0:16:35:0,35,197	0/0:8,0:8:17.46:0,17,135	0/0:2,0:2:6:0,6,56	0/0:2,0:2:2.80:0,3,13	0/0:2,0:2:2.04:0,2,6	1/1:6,0:6:0.89:2,1,0	0/0:12,0:11:14.98:0,15,61	0/0:4,0:4:7.14:0,7,31	0/0:10,0:10:16.21:0,16,86	0/0:3,0:3:8.35:0,8,55	0/0:4,0:4:4.04:0,4,16	0/0:6,0:6:6.14:0,6,29	0/0:1,0:1:0:0,0,0
chr10	47563280	.	ACCT	A	281.98	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=1.294;DP=248;FS=3.448;HRun=0;HaplotypeScore=84.8380;InbreedingCoeff=0.4050;MQ=76.91;MQ0=4;MQRankSum=-2.844;QD=14.84;ReadPosRankSum=-2.289;VQSLOD=3.0684;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:72.06:0,72,1056	0/0:2,0:2:6.02:0,6,108	0/0:32,0:22:58.20:0,58,1073	0/0:28,0:20:42.14:0,42,851	0/0:7,0:7:3.01:0,3,47	0/0:5,0:5:15.05:0,15,285	0/0:7,0:7:18.06:0,18,298	1/1:10,9:19:47.71:375,48,0	0/0:6,0:6:14.89:0,15,178	0/0:6,0:6:15.01:0,15,169	0/0:0,0:3:3.01:0,3,43	0/0:8,0:8:21.04:0,21,320	0/0:4,0:4:11.83:0,12,179	0/0:4,0:4:5.81:0,6,49	0/0:13,0:13:33.48:0,33,460	0/0:16,0:16:44.97:0,45,621	0/0:8,0:8:17.89:0,18,154	0/0:2,0:2:5.98:0,6,47	0/0:2,0:2:4.24:0,4,28	0/0:2,0:2:3:0,3,29	0/0:6,0:6:5.89:0,6,39	0/0:11,0:10:15.73:0,16,328	0/0:4,0:4:7.73:0,8,76	0/0:9,0:9:21.02:0,21,287	0/0:3,0:3:9.02:0,9,122	0/0:4,0:4:11.87:0,12,102	0/0:6,0:6:12.03:0,12,158	0/0:1,0:1:0:0,0,0
chr10	47563650	.	A	AAAAT	1718.19	PASS	AB=0.850;AC=28;AF=0.778;AN=36;BaseQRankSum=-0.452;DP=239;FS=14.807;HRun=0;HaplotypeScore=51.1947;InbreedingCoeff=0.3286;MQ=52.39;MQ0=3;MQRankSum=-2.067;QD=10.54;ReadPosRankSum=-0.589;VQSLOD=0.9457;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,0:8:3.90:54,4,0	1/1:3,0:5:9.03:156,9,0	./.	./.	1/1:14,0:16:12.02:164,12,0	./.	1/1:7,0:7:2.92:17,3,0	1/1:27,0:25:23.92:237,24,0	0/0:6,0:6:6.02:0,6,91	./.	1/1:6,0:6:6.02:120,6,0	1/1:9,1:10:3.01:70,3,0	1/1:4,2:6:3.01:70,3,0	0/0:6,0:7:3:0,3,28	1/1:9,0:10:6.02:105,6,0	./.	1/1:20,0:19:16.73:197,17,0	1/1:12,0:13:12:149,12,0	./.	./.	./.	./.	0/0:8,0:8:2.04:0,2,6	./.	1/1:4,1:6:9.03:176,9,0	1/1:14,0:13:3.01:52,3,0	0/1:5,0:7:0.37:0,0,46	0/1:4,3:7:30.85:264,0,31
chr10	47563701	.	T	TA	5581.82	PASS	AB=1.000;AC=31;AF=0.554;AN=56;BaseQRankSum=-7.717;DP=273;FS=1.234;HRun=7;HaplotypeScore=37.0943;InbreedingCoeff=0.8771;MQ=71.99;MQ0=3;MQRankSum=-1.562;QD=30.01;ReadPosRankSum=2.175;VQSLOD=4.8777;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:32.64:0,33,299	0/0:0,0:3:6.11:0,6,18	0/0:9,0:9:24.04:0,24,232	0/1:4,0:3:3.78:4,0,35	1/1:0,11:11:27.08:326,27,0	0/0:1,0:6:10.19:0,10,30	0/0:0,0:5:8.15:0,8,24	1/1:4,20:21:57.16:675,57,0	0/0:13,0:13:39.06:0,39,376	1/1:1,6:7:18.06:217,18,0	1/1:0,5:5:15.05:181,15,0	0/0:6,0:6:18.01:0,18,168	0/0:13,0:13:36.06:0,36,348	1/1:0,5:5:15.05:181,15,0	0/0:0,0:6:10.19:0,10,30	1/1:0,9:9:27.08:326,27,0	1/1:4,19:23:35.97:595,36,0	1/1:2,13:14:32.23:397,32,0	1/1:0,17:17:51.16:616,51,0	1/1:0,8:8:24.04:275,24,0	1/1:0,2:2:6.02:72,6,0	0/0:3,0:3:9:0,9,82	0/0:6,0:6:18.03:0,18,174	0/0:4,0:4:12.01:0,12,112	1/1:1,13:14:30.09:362,30,0	1/1:2,14:15:42.11:485,42,0	1/1:0,13:13:33.10:398,33,0	1/1:0,13:13:39.12:471,39,0
chr10	47564418	.	TC	T	1021.08	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-1.370;DP=781;FS=4.550;HRun=3;HaplotypeScore=162.6858;InbreedingCoeff=0.9920;MQ=87.72;MQ0=1;MQRankSum=-3.213;QD=30.94;ReadPosRankSum=1.343;VQSLOD=2.4654;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,138,1963	0/0:15,0:15:45.15:0,45,641	0/0:27,0:27:81.26:0,81,1118	0/0:30,0:29:75.59:0,76,1037	0/0:27,0:27:78.26:0,78,1123	0/0:28,0:28:84.27:0,84,1190	0/0:34,0:34:96.32:0,96,1381	0/0:38,0:38:99:0,111,1564	0/0:35,0:35:99:0,105,1512	0/0:26,0:26:78.26:0,78,1122	0/0:17,0:17:42.14:0,42,605	0/0:36,0:36:99:0,105,1494	0/0:32,0:32:93.31:0,93,1331	0/0:24,0:24:72.23:0,72,1018	0/0:39,0:39:99:0,108,1522	1/1:0,33:33:90.28:1116,90,0	0/0:37,0:37:99:0,105,1455	0/0:25,0:25:75.25:0,75,1078	0/0:18,0:17:48.16:0,48,689	0/0:20,0:20:60.20:0,60,863	0/0:32,0:32:87.29:0,87,1253	0/0:21,0:21:63.19:0,63,888	0/0:32,0:32:90.30:0,90,1295	0/0:30,0:30:87.28:0,87,1233	0/0:19,0:18:54.18:0,54,778	0/0:25,0:25:72.24:0,72,1031	0/0:24,0:22:72.24:0,72,1019	0/0:8,0:8:18.06:0,18,259
chr10	47564435	.	GAC	G	10950.04	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=13.068;DP=750;FS=9.341;HRun=0;HaplotypeScore=139.7400;InbreedingCoeff=0.9978;MQ=88.96;MQ0=1;MQRankSum=-3.813;QD=39.25;ReadPosRankSum=4.412;VQSLOD=6.4142;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,132,2381	0/0:12,0:12:33.11:0,33,593	0/0:31,0:31:82.47:0,82,1314	0/0:28,0:27:60.80:0,61,942	1/1:0,24:24:63.21:902,63,0	0/0:27,0:27:81.28:0,81,1475	0/0:37,0:37:99:0,105,1893	0/0:33,0:33:96.32:0,96,1725	0/0:35,0:35:99:0,99,1766	1/1:0,25:25:75.22:1022,75,0	1/1:1,14:15:39.13:556,39,0	0/0:40,0:40:99:0,114,2052	0/0:28,0:28:78.23:0,78,1377	1/1:1,20:21:60.20:859,60,0	0/0:33,0:33:93.31:0,93,1658	0/0:37,0:37:99:0,105,1857	1/1:1,34:35:93.31:1331,93,0	1/1:1,18:19:48.16:687,48,0	1/1:1,13:14:39.11:526,39,0	1/1:1,19:20:54.18:773,54,0	1/1:0,34:34:93.31:1332,93,0	0/0:24,0:24:69.22:0,69,1234	0/0:32,0:32:81.26:0,81,1454	0/0:29,0:29:81.28:0,81,1483	1/1:0,18:18:51.17:730,51,0	1/1:0,25:25:72.24:1031,72,0	1/1:1,23:24:69.23:986,69,0	1/1:0,5:5:15.05:214,15,0
chr10	47564974	.	TCACACACACACA	T	1568.12	PASS	AB=0.852;AC=11;AF=0.196;AN=56;BaseQRankSum=6.136;DP=569;FS=29.160;HRun=0;HaplotypeScore=177.5202;InbreedingCoeff=0.5924;MQ=69.54;MQ0=9;MQRankSum=-6.215;QD=13.88;ReadPosRankSum=0.507;VQSLOD=0.8302;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:27.07:0,27,1071	0/0:11,0:11:14.89:0,15,582	0/0:37,0:21:3.01:0,3,42	0/0:28,0:18:3.01:0,3,39	0/0:12,0:11:24.06:0,24,1042	0/0:16,0:23:6.02:0,6,331	0/0:26,0:29:9.79:0,10,327	0/0:18,0:18:0.47:0,0,1	0/1:19,4:23:96.80:97,0,167	0/0:17,0:16:12.03:0,12,534	0/0:10,0:18:21.07:0,21,945	1/1:6,9:17:27.09:886,27,0	1/1:9,6:16:14.72:410,15,0	0/0:16,0:15:9.03:0,9,343	0/0:17,0:23:12.04:0,12,546	0/0:17,0:16:24.08:0,24,1123	0/0:20,0:25:33.11:0,33,1617	0/0:12,0:16:15.05:0,15,628	0/0:15,0:15:10.59:0,11,357	0/0:13,0:15:9.03:0,9,272	0/0:24,0:33:27.07:0,27,746	1/1:17,5:22:3.48:103,3,0	1/1:8,5:13:2.92:17,3,0	1/1:15,7:22:6.02:206,6,0	0/0:14,0:17:18.06:0,18,872	0/0:12,0:16:29.46:0,29,1241	0/0:15,0:23:15.52:0,16,418	0/0:9,0:9:3.01:0,3,113
chr10	47565114	.	CATGT	C	5399.03	PASS	AB=0.942;AC=45;AF=0.804;AN=56;BaseQRankSum=-1.824;DP=554;FS=1.681;HRun=0;HaplotypeScore=111.4306;InbreedingCoeff=0.1149;MQ=69.24;MQ0=21;MQRankSum=-0.479;QD=11.54;ReadPosRankSum=3.702;VQSLOD=4.3637;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:26:43.16:402,43,0	1/1:0,8:8:14.28:156,14,0	0/0:41,0:21:55.59:0,56,590	0/0:45,0:32:59.71:0,60,723	1/1:0,0:19:5.72:25,6,0	1/1:1,16:16:3.01:57,3,0	1/1:1,21:23:2.79:39,3,0	1/1:15,0:14:38.62:275,39,0	1/1:19,0:21:58.34:406,58,0	0/1:23,0:24:16.61:355,0,17	0/1:18,0:18:3.05:249,0,3	1/1:18,0:19:14.07:270,14,0	1/1:7,0:9:13.35:134,13,0	1/1:0,0:15:3.01:39,3,0	1/1:2,14:15:6.02:115,6,0	1/1:0,0:9:2.92:39,3,0	0/1:16,0:18:99:213,0,156	0/1:19,1:21:99:294,0,118	1/1:17,0:17:31.90:279,32,0	1/1:1,0:15:14.42:121,14,0	1/1:35,0:34:61.90:414,62,0	1/1:9,0:11:26.77:202,27,0	1/1:10,0:11:29.73:213,30,0	1/1:25,0:26:29.78:260,30,0	0/1:21,2:23:99:375,0,150	0/1:20,0:20:99:246,0,110	1/1:1,0:13:8.46:111,8,0	0/1:12,0:13:39.11:110,0,39
chr10	47565167	.	GCT	G	86.75	PASS	AB=0.929;AC=5;AF=0.089;AN=56;BaseQRankSum=5.244;DP=576;FS=32.197;HRun=0;HaplotypeScore=125.7389;InbreedingCoeff=-0.1029;MQ=48.19;MQ0=35;MQRankSum=-2.863;QD=0.76;ReadPosRankSum=-2.085;VQSLOD=0.6870;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:39,0:38:34.46:34,0,957	0/0:6,0:6:6.31:0,6,132	0/1:34,2:8:62.47:62,0,193	0/0:47,1:18:2.26:0,2,519	0/0:29,0:29:68.93:0,69,1010	0/0:12,0:12:26.76:0,27,372	0/0:25,0:24:50.99:0,51,698	0/0:17,0:12:31.81:0,32,560	0/0:20,0:20:51:0,51,664	0/1:15,0:15:2.72:3,0,603	0/0:16,0:16:44.74:0,45,738	0/0:15,0:16:18.23:0,18,429	0/1:10,0:10:0.03:0,0,135	0/0:14,0:14:14.89:0,15,500	0/0:12,1:12:20.72:0,21,284	0/0:17,0:17:44.93:0,45,636	0/0:21,1:22:50.93:0,51,821	0/0:26,1:26:28.32:0,28,935	0/0:18,0:16:14.97:0,15,565	0/0:19,0:19:39.01:0,39,521	0/0:34,0:32:23.64:0,24,807	0/0:17,0:16:37.98:0,38,489	0/0:16,0:15:36.12:0,36,583	0/0:25,2:24:37.36:0,37,468	0/0:13,1:14:1.59:0,2,420	0/1:8,5:13:87.77:88,0,402	0/0:22,0:21:27.41:0,27,725	0/0:13,0:12:29.90:0,30,417
chr10	47565173	.	GCA	G	74.47	PASS	AB=0.966;AC=8;AF=0.143;AN=56;BaseQRankSum=9.066;DP=595;FS=16.769;HRun=0;HaplotypeScore=124.7234;InbreedingCoeff=0.0412;MQ=51.26;MQ0=31;MQRankSum=-5.549;QD=0.49;ReadPosRankSum=-2.286;VQSLOD=1.2089;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:42,1:43:20.92:21,0,1667	0/0:6,0:6:3.58:0,4,159	0/0:43,0:15:21.60:0,22,662	0/0:51,1:22:5.80:0,6,881	0/0:27,1:28:72.25:0,72,1410	0/0:13,0:13:30.07:0,30,552	0/0:21,0:20:51.17:0,51,940	0/0:17,0:14:42.14:0,42,825	0/1:23,0:22:9.95:10,0,128	0/0:14,0:14:2.20:0,2,635	0/0:16,0:16:48.16:0,48,952	0/1:16,1:17:27.03:56,0,27	1/1:10,0:10:8.77:58,9,0	0/0:17,0:17:36.87:0,37,761	0/0:14,1:14:26.86:0,27,510	0/0:17,0:17:51.13:0,51,980	0/0:19,1:20:54.61:0,55,1006	0/0:26,0:25:8.43:0,8,1097	0/0:15,0:13:36.12:0,36,669	0/0:22,0:22:56.82:0,57,996	0/0:33,0:31:62.57:0,63,1205	0/1:18,1:18:15.54:16,0,54	0/0:20,0:19:24.28:0,24,123	0/1:28,0:25:8.50:9,0,48	0/0:13,1:14:4.04:0,4,569	0/1:11,1:12:37.97:38,0,493	0/0:23,0:23:58.12:0,58,1120	0/0:10,0:10:10.18:0,10,403
chr10	47565175	.	ATG	A	2485.52	PASS	AB=0.545;AC=11;AF=0.196;AN=56;BaseQRankSum=6.289;DP=605;FS=2.271;HRun=0;HaplotypeScore=118.5018;InbreedingCoeff=0.8853;MQ=51.50;MQ0=29;MQRankSum=0.309;QD=21.06;ReadPosRankSum=0.366;VQSLOD=4.1822;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,100,1584	0/0:6,0:6:15.03:0,15,222	0/0:46,0:17:46.79:0,47,720	0/0:52,0:22:56.07:0,56,821	0/0:29,0:29:75.24:0,75,1221	0/0:13,0:13:30.10:0,30,510	0/0:21,0:20:48.16:0,48,782	0/0:18,0:15:42.14:0,42,702	0/1:4,20:23:2.87:536,0,3	0/0:14,0:14:36.07:0,36,558	0/0:16,0:16:45.15:0,45,765	1/1:4,13:17:28.91:461,29,0	1/1:6,5:11:3.45:179,3,0	0/0:18,0:18:45.61:0,46,727	0/0:14,0:13:27.09:0,27,452	0/0:18,0:18:54.18:0,54,915	0/0:20,0:20:48.14:0,48,767	0/0:26,0:25:60.62:0,61,981	0/0:15,0:14:30.10:0,30,489	0/0:24,0:24:63.10:0,63,981	0/0:31,0:29:63.19:0,63,1007	1/1:1,18:18:35.49:467,35,0	1/1:3,16:19:42.14:546,42,0	1/1:7,21:25:35.93:468,36,0	0/0:14,0:14:32.28:0,32,511	0/0:12,0:12:25.56:0,26,412	0/0:25,0:25:64.14:0,64,1026	0/0:10,0:10:21.07:0,21,357
chr10	47566436	.	T	TA	17513.14	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-9.879;DP=682;FS=0.448;HRun=7;HaplotypeScore=62.1641;InbreedingCoeff=0.9953;MQ=77.51;MQ0=0;MQRankSum=-5.451;QD=29.99;ReadPosRankSum=4.734;VQSLOD=4.9096;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,43:48:99:1448,123,0	1/1:1,6:7:15.05:181,15,0	0/0:23,0:23:57.08:0,57,547	0/0:14,0:14:30.03:0,30,283	1/1:2,24:26:66.20:797,66,0	1/1:0,28:28:72.15:851,72,0	1/1:0,18:18:45.14:544,45,0	0/0:30,0:30:72.09:0,72,691	1/1:3,17:20:48.14:575,48,0	1/1:2,20:22:60.18:724,60,0	1/1:3,25:28:72.22:870,72,0	1/1:2,21:23:57.07:654,57,0	1/1:7,13:20:36.04:416,36,0	1/1:1,17:18:36.11:435,36,0	1/1:1,24:25:63.19:761,63,0	0/0:31,0:31:75.10:0,75,718	1/1:6,26:32:75.08:869,75,0	1/1:4,14:18:39.12:471,39,0	1/1:4,19:23:57.12:642,57,0	1/1:0,17:17:51.16:616,51,0	1/1:0,20:21:57.04:665,57,0	1/1:5,30:35:93.20:1081,93,0	1/1:0,22:22:54.12:636,54,0	1/1:4,25:29:72.22:870,72,0	1/1:0,28:28:81.25:978,81,0	1/1:5,31:36:93.29:1123,93,0	1/1:1,25:26:72.22:870,72,0	1/1:0,14:14:36.11:435,36,0
chr10	47566640	.	C	CAG	2417.07	PASS	AB=0.995;AC=30;AF=0.536;AN=56;BaseQRankSum=7.357;DP=710;FS=1.337;HRun=0;HaplotypeScore=323.6915;InbreedingCoeff=0.3159;MQ=59.08;MQ0=3;MQRankSum=-5.892;QD=5.30;ReadPosRankSum=-0.169;VQSLOD=2.3605;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:28,4:32:32.45:288,32,0	1/1:12,6:18:32.12:419,32,0	0/0:37,0:28:53.60:0,54,733	0/0:45,0:37:61.26:0,61,790	0/0:23,0:23:10.79:0,11,163	1/1:15,4:20:22.78:207,23,0	1/1:22,3:25:25.38:277,25,0	0/0:31,0:31:87.28:0,87,1169	1/1:15,7:22:9.44:223,9,0	0/1:30,0:27:77.28:77,0,335	0/0:29,0:28:20.25:0,20,137	1/1:19,5:23:32.54:206,33,0	1/1:18,4:22:29.16:272,29,0	0/1:28,0:28:38.97:39,0,117	1/1:21,6:27:30.40:243,30,0	0/0:21,0:21:60.20:0,60,824	0/1:28,0:28:20.58:21,0,219	0/1:20,0:19:44.08:44,0,157	0/1:22,0:22:13.94:14,0,258	0/0:20,0:20:8.42:0,8,155	0/0:28,0:27:2.52:0,3,20	1/1:21,7:28:5.59:36,6,0	1/1:18,3:21:3:25,3,0	1/1:8,6:13:3.54:13,4,0	0/0:20,0:20:11.42:0,11,81	0/1:40,0:39:72.26:72,0,458	0/1:21,0:22:79.10:79,0,197	0/1:12,0:10:55.55:56,0,98
chr10	47566642	.	G	GAC	1871.04	PASS	AB=0.933;AC=19;AF=0.339;AN=56;BaseQRankSum=10.084;DP=799;FS=0.394;HRun=0;HaplotypeScore=387.4879;InbreedingCoeff=-0.1085;MQ=54.39;MQ0=6;MQRankSum=-10.478;QD=4.11;ReadPosRankSum=-2.116;VQSLOD=1.3185;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:41,0:42:3.21:119,3,0	1/1:20,0:20:7.70:241,8,0	0/0:40,0:27:58.98:0,59,847	0/0:48,0:38:65.64:0,66,933	0/0:26,0:26:31.64:0,32,396	0/1:28,0:27:10.61:83,0,11	1/1:26,0:25:17.63:119,18,0	0/0:30,0:30:54.73:0,55,1232	0/1:32,2:34:30.79:382,0,31	0/1:31,3:31:99:230,0,568	0/0:27,1:27:27:0,27,332	0/1:31,0:30:32.21:32,0,58	0/1:24,2:26:77.97:109,0,78	0/1:26,4:30:43.16:43,0,250	0/1:36,0:36:9.68:38,0,10	0/0:21,0:21:60.20:0,60,917	0/1:27,2:29:30.52:31,0,376	0/1:17,2:18:99:111,0,295	0/1:26,0:25:87.31:87,0,550	0/0:18,3:20:25.02:0,25,306	0/0:32,0:29:2.60:0,3,42	0/0:29,0:29:5.05:0,5,33	0/0:23,0:23:11.97:0,12,96	0/0:21,0:20:11.88:0,12,65	0/0:23,2:25:12.65:0,13,180	0/1:37,4:40:99:163,0,888	0/1:21,3:24:99:159,0,345	0/1:7,2:7:93.34:93,0,155
chr10	47566644	.	GAC	G	2599.05	PASS	AB=0.847;AC=21;AF=0.375;AN=56;BaseQRankSum=6.143;DP=809;FS=9.610;HRun=0;HaplotypeScore=366.4696;InbreedingCoeff=0.4050;MQ=51.36;MQ0=6;MQRankSum=-5.461;QD=6.73;ReadPosRankSum=0.714;VQSLOD=2.0013;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,23:42:3.43:364,3,0	1/1:9,11:20:10.71:371,11,0	0/0:38,0:24:69.91:0,70,1039	0/0:48,0:37:64.20:0,64,1127	0/0:26,0:26:11.41:0,11,210	0/1:17,9:25:11.87:243,0,12	1/1:12,15:25:19.28:283,19,0	0/0:31,0:31:87.21:0,87,1137	0/1:24,11:35:14.91:262,0,15	0/0:36,0:33:59.61:0,60,612	0/0:28,0:27:21.09:0,21,181	1/1:20,13:32:33.45:431,33,0	0/1:17,8:26:2.62:326,0,3	0/1:30,0:30:15.94:16,0,157	0/1:19,17:36:16.22:338,0,16	0/0:20,0:20:60.21:0,60,1123	0/1:29,0:29:9.05:9,0,250	0/0:20,0:19:13.84:0,14,267	0/0:31,0:30:22.04:0,22,435	0/0:21,0:20:25.18:0,25,235	0/0:33,0:29:2.97:0,3,20	1/1:13,16:29:5.80:60,6,0	1/1:11,12:23:2.86:25,3,0	1/1:17,4:20:8.38:50,8,0	0/0:26,0:26:13.67:0,14,116	0/0:41,0:40:57.10:0,57,714	0/0:24,0:24:15.31:0,15,288	0/1:9,0:7:4.47:4,0,99
chr10	47566649	.	ACAGACAGACAG	A	6630.93	PASS	AB=1.000;AC=34;AF=0.607;AN=56;BaseQRankSum=0.047;DP=828;FS=17.714;HRun=0;HaplotypeScore=429.5890;InbreedingCoeff=-0.1499;MQ=49.33;MQ0=10;MQRankSum=-0.857;QD=9.42;ReadPosRankSum=4.266;VQSLOD=1.4111;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:45,0:44:99:464,0,185	0/1:21,0:21:58.52:215,0,59	0/0:44,0:24:50.30:0,50,698	0/0:58,0:38:38.98:0,39,1155	1/1:25,0:25:8.39:136,8,0	0/1:25,0:24:99:194,0,103	1/1:26,0:24:9.05:247,9,0	1/1:11,19:30:57.19:1151,57,0	0/1:38,0:38:99:130,0,429	0/1:35,0:32:99:480,0,169	1/1:28,0:27:15.78:213,16,0	1/1:32,0:31:0.36:33,0,0	0/1:25,0:25:54.86:55,0,85	1/1:29,0:29:16.35:250,16,0	0/1:34,0:34:25.04:462,0,25	0/0:22,0:22:60.21:0,60,2776	1/1:29,0:29:6.87:300,7,0	0/1:18,0:17:84.33:84,0,191	0/1:33,0:29:99:409,0,274	1/1:23,0:22:3.42:187,3,0	0/1:35,0:31:0.35:0,0,1	0/1:28,0:28:0.20:0,0,1	1/1:22,0:22:0.47:1,0,0	0/1:22,0:21:1.84:15,0,2	0/1:26,0:26:7.06:41,0,7	0/1:39,0:38:99:1027,0,152	0/1:27,0:26:77.99:376,0,78	0/1:9,0:7:57.02:160,0,57
chr10	47566653	.	ACAGACAG	A	6940.73	PASS	AB=0.967;AC=36;AF=0.643;AN=56;BaseQRankSum=2.656;DP=824;FS=9.000;HRun=0;HaplotypeScore=390.0210;InbreedingCoeff=-0.0889;MQ=46.96;MQ0=11;MQRankSum=-2.810;QD=10.04;ReadPosRankSum=4.478;VQSLOD=1.2139;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:43,3:45:99:527,0,120	0/1:18,3:21:51.80:283,0,52	0/0:48,0:23:56.20:0,56,765	0/0:63,0:36:3.21:0,3,967	1/1:25,0:25:8.71:136,9,0	0/1:22,3:23:52.58:227,0,53	1/1:25,0:23:9.21:281,9,0	1/1:25,0:25:57.19:839,57,0	0/1:39,0:39:99:238,0,239	0/1:33,0:30:91.69:449,0,92	1/1:27,0:26:15.86:213,16,0	1/1:30,0:29:20.67:336,21,0	0/1:27,0:27:73.87:264,0,74	1/1:28,0:28:18.74:204,19,0	0/1:29,7:36:51.58:522,0,52	0/0:22,0:22:63.22:0,63,2041	0/1:30,0:30:4.68:252,0,5	0/1:16,0:15:82.27:124,0,82	0/1:32,0:28:99:385,0,186	1/1:23,0:22:6.81:145,7,0	0/1:35,0:31:0.82:1,0,1	1/1:29,0:29:1.74:34,2,0	0/1:20,0:20:0:1,0,0	1/1:21,0:20:1.86:50,2,0	1/1:25,0:25:6.15:71,6,0	0/1:37,0:36:23.46:815,0,23	0/1:26,0:25:44.13:302,0,44	1/1:10,0:8:22.63:241,23,0
chr10	47566657	.	ACAG	A	8124.96	PASS	AB=0.934;AC=41;AF=0.732;AN=56;BaseQRankSum=5.388;DP=817;FS=12.485;HRun=0;HaplotypeScore=355.6713;InbreedingCoeff=0.2307;MQ=44.66;MQ0=10;MQRankSum=-2.299;QD=11.93;ReadPosRankSum=5.330;VQSLOD=2.9597;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:47,0:46:99:310,0,101	0/1:19,0:19:34.55:237,0,35	0/0:49,0:23:53.61:0,54,772	0/0:66,0:39:36.62:0,37,1035	1/1:24,0:24:9.03:137,9,0	0/1:23,0:22:42.48:144,0,42	1/1:25,0:23:6.77:200,7,0	1/1:21,0:21:57.15:811,57,0	0/1:35,4:39:99:288,0,155	1/1:33,0:30:54.93:839,55,0	1/1:25,0:24:16.19:214,16,0	1/1:20,10:29:27.79:437,28,0	0/1:19,7:26:50.15:330,0,50	1/1:31,0:31:18.60:200,19,0	0/1:36,0:36:47.34:299,0,47	0/0:21,0:21:63.21:0,63,1298	1/1:30,0:30:28.08:383,28,0	1/1:16,0:15:15.15:305,15,0	1/1:29,0:25:28.52:603,29,0	1/1:21,0:20:3.60:159,4,0	0/1:36,0:32:0.75:1,0,1	1/1:22,7:29:2.40:44,2,0	0/1:12,8:20:0.58:1,0,1	0/1:22,0:21:7.90:54,0,8	1/1:26,0:26:6.48:75,6,0	1/1:35,0:35:71.26:1189,71,0	1/1:27,0:26:51.18:552,51,0	1/1:10,0:8:24.01:313,24,0
chr10	47566659	.	A	AG	4944.53	PASS	AB=0.929;AC=43;AF=0.768;AN=56;BaseQRankSum=6.566;DP=821;FS=0.442;HRun=1;HaplotypeScore=362.9847;InbreedingCoeff=0.3217;MQ=43.70;MQ0=10;MQRankSum=-2.765;QD=7.23;ReadPosRankSum=1.635;VQSLOD=1.5964;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:41,5:45:24.52:158,25,0	0/1:19,1:20:10.07:144,0,10	0/0:47,1:22:62.53:0,63,696	0/0:66,1:40:51.48:0,51,934	1/1:22,0:22:8.86:72,9,0	0/1:22,2:23:2.37:51,0,2	1/1:28,0:26:16.12:130,16,0	1/1:20,0:20:59.70:456,60,0	0/1:33,6:39:99:155,0,118	1/1:32,0:29:29.22:580,29,0	1/1:25,0:24:11.45:97,11,0	1/1:27,3:29:13.61:96,14,0	0/1:21,5:26:3.72:161,0,4	1/1:30,0:30:15.58:117,16,0	1/1:33,4:37:25.64:124,26,0	0/0:22,0:22:66.20:0,66,843	1/1:29,0:29:33.48:302,33,0	1/1:16,0:15:11.27:266,11,0	0/1:30,0:26:23.10:366,0,23	1/1:21,0:20:12.17:96,12,0	1/1:39,0:35:1.31:19,1,0	1/1:26,3:29:1.54:13,2,0	0/1:21,0:21:0.51:1,0,1	0/1:21,2:22:14.85:28,0,15	1/1:26,0:26:5.18:55,5,0	1/1:35,0:34:71.97:801,72,0	1/1:26,0:25:58.14:448,58,0	1/1:10,0:8:23.97:207,24,0
chr10	47566660	.	G	GA	9236.38	PASS	AB=0.706;AC=43;AF=0.768;AN=56;BaseQRankSum=6.177;DP=818;FS=8.001;HRun=1;HaplotypeScore=346.0893;InbreedingCoeff=0.2799;MQ=43.83;MQ0=9;MQRankSum=-3.342;QD=13.56;ReadPosRankSum=3.993;VQSLOD=3.6071;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:23,21:43:18.87:268,0,19	1/1:8,9:17:5.73:211,6,0	0/0:47,0:22:48.53:0,49,722	0/0:64,0:40:25.77:0,26,935	1/1:1,19:20:9.03:140,9,0	0/1:14,10:23:13.41:113,0,13	0/1:10,18:26:12.43:172,0,12	1/1:23,0:23:66.66:989,67,0	0/1:27,11:38:99:221,0,145	1/1:4,27:28:79.12:1196,79,0	1/1:4,23:26:14.66:215,15,0	1/1:22,8:29:30.31:202,30,0	1/1:20,5:25:6.77:220,7,0	1/1:2,27:29:16.82:223,17,0	0/1:23,14:37:16.86:197,0,17	0/0:22,0:22:66.22:0,66,922	1/1:4,24:28:31.44:465,31,0	1/1:5,12:16:32.52:494,33,0	1/1:6,23:25:56.17:881,56,0	1/1:2,19:20:14.75:209,15,0	1/1:15,27:40:3.23:48,3,0	1/1:13,13:26:2.74:17,3,0	0/1:15,8:23:0.38:1,0,0	0/1:13,9:22:13.76:22,0,14	1/1:2,22:25:5.22:95,5,0	1/1:6,32:37:90.79:1456,91,0	1/1:3,21:24:56.87:804,57,0	1/1:0,10:8:24.08:377,24,0
chr10	47566669	.	CA	C	1931.89	PASS	AB=0.759;AC=12;AF=0.214;AN=56;BaseQRankSum=2.713;DP=851;FS=3.560;HRun=1;HaplotypeScore=363.0427;InbreedingCoeff=-0.1026;MQ=42.26;MQ0=10;MQRankSum=-3.958;QD=6.78;ReadPosRankSum=3.149;VQSLOD=0.8326;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:45:59.36:0,59,755	0/0:17,0:17:23.46:0,23,289	0/0:47,0:21:21.96:0,22,673	0/0:63,0:35:75.15:0,75,1089	0/0:15,9:24:9.43:0,9,142	0/0:26,0:25:32.56:0,33,336	0/0:30,0:28:21.13:0,21,279	0/0:31,0:31:57.12:0,57,680	0/0:39,0:39:68.58:0,69,1005	0/1:22,13:32:99:488,0,674	1/1:9,13:21:1:4,1,0	0/0:33,0:33:55.58:0,56,746	0/0:27,0:27:51.75:0,52,728	0/1:16,12:28:69.25:69,0,163	0/0:39,0:39:65.12:0,65,654	0/0:22,0:22:66.23:0,66,1051	0/1:25,10:35:99:161,0,319	0/1:16,5:20:99:151,0,577	0/1:23,6:24:99:248,0,453	0/1:8,10:17:35.81:41,0,36	0/0:34,12:42:15.14:0,15,240	0/0:24,0:24:5.64:0,6,94	0/1:24,0:24:0.38:0,0,1	0/0:24,0:24:20.86:0,21,213	0/0:15,13:28:8.01:0,8,143	0/1:21,18:38:99:672,0,558	0/1:14,10:23:99:179,0,481	0/1:6,4:8:58.95:59,0,221
chr10	47566680	.	ACAG	A	9397.11	PASS	AB=0.902;AC=38;AF=0.679;AN=56;BaseQRankSum=-2.823;DP=817;FS=1.280;HRun=0;HaplotypeScore=328.4181;InbreedingCoeff=0.0182;MQ=45.37;MQ0=7;MQRankSum=-0.749;QD=13.42;ReadPosRankSum=2.388;VQSLOD=3.8854;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:43,5:47:99:596,0,123	0/1:10,3:13:1.39:175,0,1	0/0:39,0:18:12:0,12,506	0/0:56,0:31:30.22:0,30,773	1/1:22,0:22:11.50:124,12,0	0/1:22,3:24:46.76:212,0,47	0/1:27,2:27:5.87:349,0,6	0/1:32,0:32:99:350,0,278	0/1:30,6:36:84.62:665,0,85	1/1:33,0:30:50.71:825,51,0	1/1:20,0:19:0.96:4,1,0	0/1:31,3:33:99:434,0,269	0/1:22,5:27:99:443,0,164	1/1:29,0:29:22.39:222,22,0	0/1:34,5:39:99:657,0,104	0/0:22,0:22:57.19:0,57,1228	1/1:34,0:34:60.90:764,61,0	1/1:21,0:20:35.45:425,35,0	1/1:25,0:21:55.54:644,56,0	0/1:19,0:18:4:40,0,4	1/1:48,0:46:18.27:231,18,0	0/1:16,3:19:34.12:38,0,34	1/1:21,1:22:2.31:45,2,0	0/1:25,3:28:35.47:167,0,35	1/1:26,0:26:8.02:57,8,0	1/1:37,0:36:72.10:1003,72,0	1/1:24,0:23:55.10:612,55,0	1/1:10,0:8:24.01:313,24,0
chr10	47566682	.	A	AG	6007.63	PASS	AB=0.908;AC=43;AF=0.768;AN=56;BaseQRankSum=3.112;DP=805;FS=4.078;HRun=1;HaplotypeScore=319.7483;InbreedingCoeff=0.2888;MQ=46.11;MQ0=6;MQRankSum=-0.989;QD=8.68;ReadPosRankSum=2.415;VQSLOD=2.6617;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:37,11:47:6.99:334,7,0	1/1:8,4:12:19.19:182,19,0	0/0:37,0:18:39.48:0,39,461	0/0:53,0:31:35.39:0,35,610	1/1:21,0:21:11.79:87,12,0	1/1:20,4:23:7.12:126,7,0	1/1:21,7:26:27.89:197,28,0	0/1:32,0:32:99:114,0,160	0/1:33,4:37:46.37:433,0,46	1/1:33,0:30:51.86:632,52,0	0/1:18,0:17:0.22:0,0,0	0/1:29,5:33:99:201,0,216	0/1:25,2:27:99:213,0,115	1/1:29,0:29:21.28:155,21,0	1/1:33,6:39:37.18:319,37,0	0/0:20,0:20:57.19:0,57,740	1/1:35,0:35:49.72:430,50,0	1/1:21,0:20:11.03:355,11,0	1/1:25,0:21:54.22:401,54,0	1/1:19,0:18:5.38:31,5,0	1/1:44,1:43:24.32:182,24,0	0/1:15,4:19:22.74:23,0,27	1/1:19,3:22:2.45:20,2,0	0/1:22,6:28:37.43:57,0,37	1/1:25,0:25:8.17:76,8,0	1/1:37,0:36:97.60:778,98,0	1/1:24,0:23:56.31:458,56,0	1/1:10,0:8:23.94:202,24,0
chr10	47566683	.	G	GA	11978.58	PASS	AB=0.675;AC=39;AF=0.696;AN=56;BaseQRankSum=-1.570;DP=788;FS=9.465;HRun=1;HaplotypeScore=280.6397;InbreedingCoeff=0.0718;MQ=46.22;MQ0=5;MQRankSum=-0.990;QD=17.77;ReadPosRankSum=4.112;VQSLOD=3.6484;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:21,26:46:66.84:648,0,67	0/1:10,2:12:6.48:208,0,6	0/0:38,0:19:15:0,15,488	0/0:52,0:31:29.77:0,30,667	1/1:0,20:20:12.04:184,12,0	0/1:12,12:23:20.60:226,0,21	1/1:10,16:24:2.03:323,2,0	0/1:16,14:30:99:498,0,155	0/1:15,21:36:23.72:849,0,24	1/1:1,29:28:72:1229,72,0	0/1:0,15:14:0.25:0,0,0	0/1:18,15:33:99:435,0,255	0/1:15,13:28:99:496,0,118	1/1:0,28:28:21.07:307,21,0	0/1:18,19:37:56.67:615,0,57	0/0:20,0:20:57.19:0,57,796	1/1:1,34:35:63.39:853,63,0	1/1:2,20:21:45.68:751,46,0	1/1:4,20:21:60.19:887,60,0	1/1:1,19:19:6.65:70,7,0	1/1:6,38:43:24.55:371,25,0	0/1:15,4:19:32.71:41,0,33	1/1:14,8:22:2.63:44,3,0	0/1:9,19:28:41.12:152,0,41	1/1:0,23:23:8.23:144,8,0	1/1:5,31:35:96.13:1461,96,0	1/1:0,20:21:56.89:821,57,0	1/1:0,10:8:24.08:366,24,0
chr10	47567808	.	C	CT	1400.18	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-4.162;DP=802;FS=0.000;HRun=1;HaplotypeScore=202.0668;InbreedingCoeff=0.9998;MQ=80.62;MQ0=0;MQRankSum=3.142;QD=37.84;ReadPosRankSum=-3.803;VQSLOD=2.2425;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:90.08:0,90,1090	0/0:14,0:14:36.12:0,36,463	0/0:26,0:26:72.17:0,72,873	0/0:22,0:22:62.77:0,63,704	0/0:32,0:32:93.26:0,93,1186	0/0:22,0:22:63.20:0,63,798	0/0:23,0:23:63.07:0,63,769	1/1:1,36:37:99:1495,105,0	0/0:30,0:30:90.22:0,90,1141	0/0:39,0:39:99:0,108,1401	0/0:20,0:20:60.06:0,60,722	0/0:35,0:35:99:0,102,1282	0/0:36,0:36:99:0,99,1256	0/0:37,0:37:99:0,111,1395	0/0:32,0:32:90.21:0,90,1123	0/0:28,0:28:81.26:0,81,1051	0/0:32,0:32:96.31:0,96,1246	0/0:23,0:23:66.21:0,66,856	0/0:24,0:24:72.18:0,72,889	0/0:19,0:19:57.17:0,57,726	0/0:28,0:28:84.22:0,84,1057	0/0:28,0:28:84.27:0,84,1086	0/0:37,0:37:93.30:0,93,1205	0/0:19,0:19:42.02:0,42,496	0/0:26,0:26:75.23:0,75,959	0/0:43,0:43:99:0,126,1575	0/0:31,0:30:90.28:0,90,1155	0/0:22,0:22:66.21:0,66,853
chr10	47567848	.	GGTCAATAACACTGCT	G	25980.83	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=17.159;DP=769;FS=5.157;HRun=0;HaplotypeScore=363.0074;InbreedingCoeff=0.9999;MQ=82.63;MQ0=0;MQRankSum=-19.264;QD=90.84;ReadPosRankSum=4.223;VQSLOD=3.9663;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,22:30:60.21:2653,60,0	1/1:1,13:14:39.13:1697,39,0	0/0:25,0:25:63.21:0,63,3575	0/0:29,0:30:81.80:0,82,4361	0/0:34,0:34:99:0,99,6811	1/1:3,16:19:45.15:2001,45,0	1/1:9,19:28:39.13:1739,39,0	0/0:35,0:35:93.32:0,93,6591	1/1:4,21:25:57.20:2542,57,0	0/0:43,0:43:99:0,129,9241	0/0:26,0:26:78.27:0,78,5484	1/1:7,20:27:54.19:2402,54,0	1/1:6,25:31:72.25:3210,72,0	0/0:28,0:28:75.26:0,75,5077	1/1:4,24:28:63.22:2809,63,0	0/0:29,0:29:84.29:0,84,6161	0/0:30,0:30:90.31:0,90,5821	0/0:16,0:16:48.16:0,48,3365	0/0:27,0:27:75.24:0,75,4345	0/0:27,0:27:78.27:0,78,5703	0/0:36,0:36:99:0,102,6986	1/1:5,22:27:57.20:2542,57,0	1/1:6,27:33:68.58:3058,69,0	1/1:7,17:24:30.10:1330,30,0	0/0:26,0:26:72.25:0,72,4961	0/0:31,0:31:87.30:0,87,6131	0/0:22,0:22:66.23:0,66,4250	0/0:18,0:18:51.18:0,51,3685
chr10	47568203	.	C	CGTGT	799.79	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=0.547;DP=793;FS=2.509;HRun=0;HaplotypeScore=162.9074;InbreedingCoeff=0.9076;MQ=66.01;MQ0=0;MQRankSum=-0.660;QD=34.77;ReadPosRankSum=-4.282;VQSLOD=3.0936;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:67,0:67:99:0,178,3123	0/0:10,0:10:27.09:0,27,495	0/0:24,0:22:30.51:0,31,731	0/0:27,0:26:65.33:0,65,1153	0/0:26,0:26:30.70:0,31,532	0/0:29,0:29:84.03:0,84,1286	0/0:33,0:33:87.20:0,87,1415	0/0:38,0:38:99:0,102,1649	0/0:37,0:37:99:0,102,1756	0/0:31,0:31:48.01:0,48,659	0/0:21,0:21:52.38:0,52,582	0/0:26,0:26:75.26:0,75,1359	0/0:32,0:32:84.29:0,84,1513	0/0:25,0:25:36.54:0,37,559	0/0:31,0:31:90.25:0,90,1580	1/1:3,18:23:35.88:894,36,0	0/0:44,0:43:73.15:0,73,1146	0/0:21,0:21:16.77:0,17,400	0/0:29,0:28:27.47:0,27,613	0/0:20,0:20:42.05:0,42,484	0/0:48,0:48:83.35:0,83,1269	0/0:16,0:16:30.06:0,30,514	0/0:20,0:20:30.10:0,30,539	0/0:38,0:38:99:0,102,1730	0/0:19,0:19:50.99:0,51,523	0/0:27,0:27:7.51:0,8,504	0/0:24,0:24:47.20:0,47,713	0/0:7,0:7:18.05:0,18,196
chr10	47568395	.	AC	A	9009.17	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=9.031;DP=580;FS=0.991;HRun=3;HaplotypeScore=64.8268;InbreedingCoeff=0.9986;MQ=91.91;MQ0=0;MQRankSum=-5.631;QD=33.37;ReadPosRankSum=2.824;VQSLOD=5.3605;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:78.23:0,78,1085	0/0:6,0:6:18.06:0,18,259	0/0:26,0:26:66.20:0,66,913	0/0:26,0:25:69.20:0,69,953	1/1:0,15:15:33.10:409,33,0	0/0:20,0:19:57.19:0,57,820	0/0:21,0:21:60.16:0,60,806	0/0:26,0:26:78.26:0,78,1107	0/0:16,0:16:45.15:0,45,637	1/1:0,29:29:87.26:1065,87,0	1/1:0,14:14:30.09:371,30,0	0/0:18,0:18:54.17:0,54,759	0/0:18,0:18:51.17:0,51,731	1/1:2,20:22:57.13:687,57,0	0/0:26,0:26:72.24:0,72,1035	0/0:22,0:22:66.22:0,66,949	1/1:1,33:34:96.30:1189,96,0	1/1:1,15:16:45.14:558,45,0	1/1:1,22:23:66.19:797,66,0	1/1:0,14:14:36.11:446,36,0	1/1:3,36:39:99:1263,102,0	0/0:11,0:11:33.11:0,33,474	0/0:12,0:12:36.12:0,36,518	0/0:34,0:34:99:0,102,1448	1/1:0,17:17:48.08:575,48,0	1/1:0,14:14:42.11:498,42,0	1/1:2,22:24:66.21:816,66,0	1/1:0,9:9:27.08:335,27,0
chr10	47568606	.	A	AAAAG	11991.07	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-4.529;DP=541;FS=26.560;HRun=0;HaplotypeScore=108.5524;InbreedingCoeff=0.9871;MQ=59.38;MQ0=6;MQRankSum=-8.162;QD=47.21;ReadPosRankSum=1.342;VQSLOD=3.1457;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,135,2229	0/0:11,0:11:24.07:0,24,401	0/0:18,0:8:17.66:0,18,242	0/0:16,0:9:16.43:0,16,215	1/1:5,15:20:45.15:1033,45,0	0/0:20,0:19:51.11:0,51,787	0/0:18,0:18:48.16:0,48,840	0/0:35,0:35:82.79:0,83,575	0/0:14,0:14:35.32:0,35,230	1/1:5,18:24:63.12:1363,63,0	1/1:5,11:17:27.09:635,27,0	0/0:12,0:12:26.74:0,27,221	0/0:17,0:17:30.03:0,30,191	1/1:1,13:15:30.10:744,30,0	0/0:14,0:14:33.10:0,33,564	1/1:7,0:7:12.04:221,12,0	1/1:5,21:26:57.19:1414,57,0	1/1:0,16:17:27.09:670,27,0	1/1:5,12:17:32.90:714,33,0	1/1:5,20:26:45.15:980,45,0	1/1:1,6:7:12.51:298,13,0	0/0:22,0:22:59.22:0,59,396	0/0:21,0:20:50.36:0,50,364	0/0:19,0:19:50.29:0,50,331	1/1:2,18:20:48.16:1141,48,0	1/1:2,15:19:35.23:929,35,0	1/1:4,22:26:57.16:1414,57,0	1/1:2,8:12:18.06:434,18,0
chr10	47568610	.	G	GA	4832.09	PASS	AB=0.934;AC=37;AF=0.661;AN=56;BaseQRankSum=5.281;DP=543;FS=11.033;HRun=10;HaplotypeScore=105.1592;InbreedingCoeff=0.4280;MQ=63.75;MQ0=3;MQRankSum=-4.292;QD=11.70;ReadPosRankSum=2.878;VQSLOD=3.2962;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,123,1009	0/0:10,0:10:20.97:0,21,172	0/1:15,0:8:19.77:20,0,64	0/0:19,0:13:7.30:0,7,123	1/1:20,0:20:24.81:148,25,0	0/0:18,0:17:41.92:0,42,345	0/0:17,0:18:46.96:0,47,372	1/1:7,27:36:59.10:810,59,0	1/1:2,11:13:30.08:320,30,0	0/1:25,0:25:36.69:155,0,37	0/1:16,0:17:50:67,0,50	0/1:6,6:12:0.63:188,0,1	1/1:0,15:16:32.85:334,33,0	1/1:16,0:16:27.77:125,28,0	0/0:13,0:13:32.96:0,33,271	1/1:0,0:5:11.36:56,11,0	1/1:26,0:26:6.76:174,7,0	1/1:18,0:18:3.50:87,4,0	1/1:16,0:17:0.04:82,0,0	0/1:23,0:25:7.71:113,0,8	0/1:9,0:9:10.23:36,0,10	1/1:5,19:24:54.07:560,54,0	1/1:3,18:20:20.48:423,20,0	1/1:1,18:19:48.12:512,48,0	1/1:19,0:19:44.23:198,44,0	0/1:21,0:21:1.87:101,0,2	1/1:25,0:25:53.38:251,53,0	1/1:13,0:12:16.38:72,16,0
chr10	47568761	.	C	CCATTGGACACT	29639	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=2.908;DP=576;FS=3.745;HRun=0;HaplotypeScore=188.6430;InbreedingCoeff=0.9979;MQ=79.56;MQ0=0;MQRankSum=-18.397;QD=104.73;ReadPosRankSum=-5.134;VQSLOD=3.9602;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,157,5229	0/0:7,0:7:21.07:0,21,670	0/0:17,0:17:39.13:0,39,1340	0/0:24,0:24:51.24:0,51,1747	1/1:12,12:27:54.08:1928,54,0	0/0:29,0:29:84.29:0,84,2980	0/0:23,0:23:66.23:0,66,2164	1/1:31,0:48:99:5602,141,0	0/0:17,0:17:51.18:0,51,1789	1/1:14,2:17:45.15:1956,45,0	1/1:8,10:18:30.10:1260,30,0	0/0:23,0:23:69.21:0,69,2221	0/0:14,0:14:42.14:0,42,1465	1/1:9,9:20:54.19:2727,54,0	0/0:27,0:27:78.27:0,78,2710	1/1:6,7:15:33.11:1648,33,0	1/1:7,7:18:39.13:2014,39,0	1/1:6,2:10:21.07:1129,21,0	1/1:8,1:11:24.07:598,24,0	1/1:11,9:22:56.79:2083,57,0	1/1:4,5:12:24.08:1035,24,0	0/0:14,0:14:39.12:0,39,1319	0/0:27,0:27:75.26:0,75,2720	0/0:19,0:19:57.20:0,57,2063	1/1:15,4:20:51.17:1553,51,0	1/1:10,6:17:48.16:2481,48,0	1/1:7,8:18:45.15:2346,45,0	1/1:1,7:10:24.08:1280,24,0
chr10	47568916	.	GT	G	10067.07	PASS	AB=0.900;AC=51;AF=0.911;AN=56;BaseQRankSum=1.996;DP=552;FS=3.897;HRun=10;HaplotypeScore=60.4849;InbreedingCoeff=0.7703;MQ=72.81;MQ0=0;MQRankSum=-3.684;QD=19.74;ReadPosRankSum=7.103;VQSLOD=4.9685;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,29:32:77.98:677,78,0	1/1:1,8:9:18:156,18,0	0/1:16,2:17:21:21,0,243	0/0:7,0:7:15.04:0,15,161	1/1:0,22:22:62.93:540,63,0	1/1:0,20:20:56.99:495,57,0	1/1:2,20:22:53.99:469,54,0	0/0:35,0:35:75.16:0,75,794	1/1:0,22:22:59.99:521,60,0	1/1:7,17:24:50.97:442,51,0	1/1:2,19:21:44.97:390,45,0	1/1:0,24:24:71.99:625,72,0	1/1:4,12:16:35.98:312,36,0	1/1:1,19:20:41.98:364,42,0	1/1:4,20:24:44.68:390,45,0	1/1:2,0:19:32.59:96,33,0	1/1:2,17:19:47.66:402,48,0	1/1:1,19:20:56.99:495,57,0	1/1:3,10:14:32.03:266,32,0	1/1:2,28:31:64.98:552,65,0	1/1:0,10:10:29.99:260,30,0	1/1:0,18:18:41.98:365,42,0	1/1:2,10:12:29.98:260,30,0	1/1:1,11:12:23.99:208,24,0	1/1:2,19:21:44.99:390,45,0	1/1:2,13:15:38.99:338,39,0	1/1:3,20:23:59.91:511,60,0	1/1:0,22:22:59.99:521,60,0
chr10	47569087	.	CAG	C	466.69	PASS	AC=12;AF=0.240;AN=50;BaseQRankSum=3.980;DP=626;FS=7.765;HRun=0;HaplotypeScore=125.7257;InbreedingCoeff=0.6281;MQ=67.54;MQ0=10;MQRankSum=3.063;QD=3.22;ReadPosRankSum=2.797;VQSLOD=1.9213;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:42,1:43:3.64:0,4,278	0/0:5,0:5:5.99:0,6,49	./.	./.	0/0:21,0:21:2.86:0,3,23	0/0:22,0:22:20.74:0,21,209	0/0:18,0:18:6.02:0,6,81	0/0:50,0:49:8.71:0,9,50	1/1:19,2:23:10.20:187,10,0	0/0:26,0:25:29.77:0,30,262	./.	1/1:21,1:22:8.98:78,9,0	1/1:18,2:20:7:47,7,0	0/0:18,0:17:8.92:0,9,63	0/0:25,0:25:15.03:0,15,178	1/1:26,0:26:14.20:70,14,0	0/0:16,0:14:0:0,0,0	0/0:16,0:16:5.98:0,6,61	0/0:19,0:19:15:0,15,161	0/0:15,0:15:0.45:0,0,1	0/0:22,0:21:3.01:0,3,41	1/1:19,3:22:12.03:128,12,0	0/0:20,0:21:2.84:0,3,14	1/1:18,13:32:11.86:110,12,0	0/0:9,0:9:2.99:0,3,24	0/0:18,0:18:20.48:0,20,152	0/0:25,0:24:20.43:0,20,122	0/0:6,0:6:2.97:0,3,20
chr10	47569912	.	C	CAA	4744.89	PASS	AB=0.766;AC=50;AF=0.893;AN=56;BaseQRankSum=-3.713;DP=379;FS=0.000;HRun=12;HaplotypeScore=66.1542;InbreedingCoeff=0.0784;MQ=55.23;MQ0=29;MQRankSum=-3.609;QD=13.22;ReadPosRankSum=1.712;VQSLOD=3.2425;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,4:23:63.09:670,63,0	1/1:2,0:5:9.01:86,9,0	0/0:18,0:12:2.07:0,2,104	0/1:17,0:10:7.60:8,0,34	1/1:10,14:22:45.10:596,45,0	1/1:9,1:18:21.04:219,21,0	1/1:4,0:8:8.95:75,9,0	1/1:13,9:26:34.55:356,35,0	1/1:7,0:9:9.01:86,9,0	1/1:7,3:14:17.53:199,18,0	1/1:2,7:13:26.56:318,27,0	1/1:2,0:3:3:28,3,0	1/1:2,0:9:6.01:57,6,0	0/1:5,0:9:14.54:16,0,15	1/1:8,0:8:6.01:66,6,0	1/1:5,1:12:19.28:193,19,0	1/1:10,15:24:43.69:564,44,0	1/1:10,4:10:18.83:193,19,0	0/1:10,1:15:48.26:104,0,48	1/1:3,0:9:14.97:52,15,0	1/1:10,1:10:11.92:94,12,0	1/1:4,0:3:2.74:12,3,0	1/1:4,0:4:6.01:57,6,0	1/1:3,0:6:5.98:50,6,0	0/1:9,6:13:7.13:165,0,7	1/1:6,7:15:31.53:329,32,0	1/1:3,0:4:5.50:41,6,0	1/1:4,2:7:9.02:113,9,0
chr10	47572094	.	TC	T	106.41	PASS	AC=2;AF=0.038;AN=52;BaseQRankSum=1.109;DP=364;FS=1.799;HRun=2;HaplotypeScore=44.6016;InbreedingCoeff=0.6928;MQ=60.58;MQ0=0;MQRankSum=0.873;QD=17.74;ReadPosRankSum=-2.105;VQSLOD=3.1156;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:54.15:0,54,752	0/0:6,0:6:18.03:0,18,230	./.	./.	0/0:2,0:2:6.01:0,6,65	0/0:5,0:5:15.05:0,15,225	0/0:36,0:36:99:0,105,1499	1/1:0,6:6:15.05:194,15,0	0/0:8,0:8:24.08:0,24,359	0/0:16,0:16:45.15:0,45,647	0/0:7,0:7:18.06:0,18,270	0/0:8,0:8:24.08:0,24,360	0/0:3,0:3:9.03:0,9,135	0/0:7,0:7:21.07:0,21,315	0/0:8,0:8:21.07:0,21,302	0/0:8,0:8:21.07:0,21,315	0/0:29,0:29:84.28:0,84,1248	0/0:38,0:38:99:0,114,1697	0/0:15,0:15:33.10:0,33,462	0/0:5,0:5:15.05:0,15,225	0/0:70,0:70:99:0,202,2967	0/0:3,0:3:9.03:0,9,135	0/0:6,0:6:18.05:0,18,249	0/0:19,0:19:57.19:0,57,854	0/0:14,0:14:42.14:0,42,629	0/0:16,0:16:48.15:0,48,692	0/0:8,0:8:24.08:0,24,358	0/0:2,0:2:6.01:0,6,70
chr10	47572677	.	GA	G	5888.61	PASS	AB=0.779;AC=30;AF=0.536;AN=56;BaseQRankSum=9.297;DP=617;FS=2.893;HRun=11;HaplotypeScore=141.3105;InbreedingCoeff=0.8467;MQ=58.44;MQ0=5;MQRankSum=-0.860;QD=15.92;ReadPosRankSum=2.784;VQSLOD=3.9992;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,1:32:47.10:0,47,644	0/0:9,0:10:26.94:0,27,270	0/0:10,1:4:8.97:0,9,77	0/1:14,0:10:25.41:25,0,57	1/1:7,21:26:24.91:411,25,0	0/0:25,0:25:63.58:0,64,649	0/0:20,2:22:7.81:0,8,473	1/1:8,21:28:53.87:436,54,0	0/0:14,0:15:30.06:0,30,311	1/1:8,16:26:23.52:362,24,0	1/1:5,11:15:32.93:269,33,0	0/0:17,1:18:17.45:0,17,382	0/0:20,1:22:31.64:0,32,563	1/1:4,19:22:53.92:443,54,0	0/0:23,1:25:33.91:0,34,591	0/1:6,21:29:2.97:369,0,3	1/1:0,33:33:89.89:739,90,0	1/1:6,21:27:12.67:421,13,0	1/1:5,11:15:35.69:283,36,0	1/1:2,17:18:14.95:312,15,0	1/1:2,6:8:14.98:123,15,0	0/0:16,1:17:11.49:0,11,327	0/0:21,0:22:54.42:0,54,545	0/0:27,0:27:81.17:0,81,846	1/1:5,20:25:44.93:369,45,0	1/1:10,21:31:27.90:433,28,0	1/1:6,18:23:54.04:427,54,0	1/1:1,19:19:56.91:464,57,0
chr10	47573323	.	CGGAGCTGG	C	9500.35	PASS	AB=0.667;AC=45;AF=0.900;AN=50;BaseQRankSum=1.605;DP=270;FS=9.278;HRun=0;HaplotypeScore=69.6642;InbreedingCoeff=0.5247;MQ=42.58;MQ0=24;MQRankSum=-5.289;QD=44.60;ReadPosRankSum=2.773;VQSLOD=3.7288;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,8:11:18.06:413,18,0	./.	0/0:25,0:4:9.03:0,9,226	./.	1/1:1,8:9:12.04:279,12,0	1/1:0,5:5:15.05:400,15,0	1/1:2,4:6:12.04:320,12,0	1/1:4,12:15:33.11:881,33,0	1/1:1,9:10:6.02:160,6,0	1/1:0,11:12:36.12:931,36,0	1/1:1,10:11:21.07:511,21,0	1/1:2,8:10:18.06:480,18,0	1/1:3,4:7:15.05:400,15,0	1/1:0,14:14:36.12:961,36,0	1/1:1,4:5:12.04:320,12,0	0/0:9,0:9:21.07:0,21,896	1/1:3,10:9:12.04:320,12,0	1/1:3,4:6:9.03:240,9,0	1/1:5,6:10:18.04:422,18,0	1/1:4,8:12:18.06:467,18,0	0/1:3,3:6:74.03:74,0,122	1/1:1,2:3:3.01:80,3,0	1/1:2,8:10:9.03:240,9,0	1/1:2,5:7:5.76:160,6,0	1/1:2,4:6:6.02:160,6,0	1/1:1,8:9:27.09:720,27,0	1/1:3,9:11:21.07:560,21,0	./.
chr10	47573776	.	T	TC	1342.45	PASS	AB=0.782;AC=13;AF=0.232;AN=56;BaseQRankSum=5.299;DP=497;FS=69.491;HRun=0;HaplotypeScore=128.3905;InbreedingCoeff=-0.0880;MQ=59.66;MQ0=10;MQRankSum=-3.176;QD=6.42;ReadPosRankSum=6.796;VQSLOD=0.5758;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:13,6:18:36.84:148,0,37	0/1:8,2:10:32.11:66,0,32	0/0:42,0:11:7.71:0,8,95	0/0:51,1:16:5.29:0,5,146	0/0:16,0:16:41.46:0,41,530	0/1:16,3:19:99:106,0,107	0/1:8,7:15:6.42:171,0,6	0/1:25,0:25:29.34:29,0,97	0/1:7,6:13:18.82:112,0,19	0/0:15,0:15:42.07:0,42,508	0/0:15,0:15:45.12:0,45,581	0/1:15,4:19:91.22:133,0,91	0/1:10,6:16:16.54:175,0,17	0/0:13,0:13:36.86:0,37,441	0/1:18,5:23:99:133,0,99	0/0:12,0:12:33.11:0,33,457	0/0:9,0:9:24.04:0,24,311	0/0:10,0:10:27.06:0,27,355	0/0:9,0:9:27.07:0,27,334	0/0:11,0:11:31.81:0,32,376	0/0:3,0:3:9:0,9,106	0/1:14,4:18:51.57:52,0,77	1/1:14,8:22:25.35:323,25,0	0/1:3,7:10:22.07:53,0,22	0/0:12,0:12:29.64:0,30,365	0/0:14,0:14:42.05:0,42,527	0/0:15,0:15:38.89:0,39,513	0/0:39,0:37:88.95:0,89,966
chr10	47573779	.	T	TTTC	4141.05	PASS	AB=0.790;AC=16;AF=0.286;AN=56;BaseQRankSum=7.847;DP=508;FS=82.039;HRun=0;HaplotypeScore=138.0769;InbreedingCoeff=0.0955;MQ=58.44;MQ0=11;MQRankSum=-7.677;QD=16.77;ReadPosRankSum=6.539;VQSLOD=0.1125;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:12,6:17:99:309,0,99	1/1:8,2:10:8.01:268,8,0	0/0:47,0:12:19.47:0,19,107	0/1:62,0:18:6.61:7,0,183	0/0:17,0:17:45.02:0,45,570	0/1:16,3:19:94.71:379,0,95	0/1:7,7:14:20.34:366,0,20	0/0:23,0:23:68.11:0,68,721	0/1:8,6:14:22.11:324,0,22	0/0:14,0:14:13:0,13,417	0/0:14,0:14:36.12:0,36,523	1/1:14,4:19:7.30:480,7,0	0/1:9,6:15:24.82:386,0,25	0/0:14,0:14:35.96:0,36,433	0/1:19,5:24:48.56:479,0,49	0/0:13,0:13:11.40:0,11,183	0/0:9,0:9:23.97:0,24,304	0/0:9,0:9:24.07:0,24,321	0/0:7,0:7:21.07:0,21,293	0/0:12,0:12:25.14:0,25,355	0/1:3,0:3:13.44:13,0,71	0/1:14,4:18:99:244,0,114	1/1:14,8:22:40.84:718,41,0	0/1:2,7:9:48.53:171,0,49	0/0:12,0:12:29.52:0,30,350	0/0:13,0:13:39:0,39,435	0/0:15,0:15:41.71:0,42,518	0/0:39,0:37:90.86:0,91,911
chr10	47573795	.	CT	C	1755.92	PASS	AB=1.000;AC=25;AF=0.446;AN=56;BaseQRankSum=-10.521;DP=531;FS=31.121;HRun=3;HaplotypeScore=115.8354;InbreedingCoeff=0.8603;MQ=48.58;MQ0=34;MQRankSum=5.195;QD=10.51;ReadPosRankSum=-0.517;VQSLOD=0.1182;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:11:29:0,29,168	0/0:10,0:10:25.59:0,26,144	0/0:80,0:12:14.53:0,15,97	0/0:94,1:18:5.26:0,5,94	1/1:16,0:16:30.93:218,31,0	0/0:17,0:17:43.97:0,44,282	0/0:11,0:11:26.75:0,27,147	0/0:22,0:18:52.81:0,53,469	0/0:12,0:12:35.01:0,35,211	1/1:11,0:11:3.55:138,4,0	1/1:11,0:11:29.32:174,29,0	0/0:19,0:19:49.40:0,49,315	0/0:13,0:13:37.90:0,38,230	1/1:10,0:10:24.24:180,24,0	0/0:20,0:20:58.15:0,58,374	0/0:12,0:12:32.63:0,33,267	1/1:11,0:8:11.59:98,12,0	0/1:8,0:7:7.59:61,0,8	1/1:8,0:7:20.86:165,21,0	1/1:3,7:10:16.10:115,16,0	1/1:2,0:1:3:25,3,0	0/0:12,0:12:32.39:0,32,204	0/0:19,0:19:55.93:0,56,376	0/0:9,0:8:14.65:0,15,87	1/1:10,0:10:17.76:132,18,0	1/1:12,0:12:21.66:120,22,0	1/1:14,0:13:26.03:238,26,0	1/1:44,0:35:23.78:309,24,0
chr10	47574320	.	A	AGT	9978.49	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-14.764;DP=675;FS=1.043;HRun=0;HaplotypeScore=84.9627;InbreedingCoeff=0.9918;MQ=75.46;MQ0=1;MQRankSum=0.289;QD=34.06;ReadPosRankSum=4.350;VQSLOD=6.9719;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,41:53:99:1706,102,0	1/1:1,7:8:12.04:201,12,0	0/0:27,0:25:44.49:0,44,521	0/0:22,0:18:32.93:0,33,364	0/0:18,0:18:48.15:0,48,608	1/1:4,22:26:13.77:765,14,0	1/1:6,34:41:75.26:1253,75,0	0/0:25,0:25:54.16:0,54,674	1/1:1,15:17:27.09:451,27,0	0/0:24,0:24:57.18:0,57,715	0/0:22,0:22:57.16:0,57,702	1/1:4,18:23:48.16:789,48,0	1/1:6,23:29:75.26:1241,75,0	0/0:23,0:23:60.18:0,60,749	1/1:3,12:15:36.12:584,36,0	0/0:24,0:24:66.20:0,66,825	0/0:28,0:28:72.23:0,72,915	0/0:21,0:21:54:0,54,663	0/0:29,0:29:72.22:0,72,896	0/0:17,0:17:45.13:0,45,557	0/0:22,0:22:60.17:0,60,744	1/1:2,21:24:51.17:852,51,0	1/1:2,18:21:39.13:633,39,0	1/1:3,32:35:90.31:1503,90,0	0/0:20,0:20:51.13:0,51,621	0/0:25,0:25:66.21:0,66,838	0/0:28,0:28:69.20:0,69,864	0/0:7,0:7:21.07:0,21,267
chr10	47574652	.	TTTTG	T	1854.65	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=8.010;DP=670;FS=0.616;HRun=0;HaplotypeScore=109.2602;InbreedingCoeff=0.9977;MQ=78.67;MQ0=0;MQRankSum=-6.599;QD=46.37;ReadPosRankSum=-4.512;VQSLOD=2.8094;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:87.30:0,87,2155	0/0:8,0:8:24.08:0,24,623	0/0:29,0:29:37.09:0,37,1369	0/0:19,0:19:51.08:0,51,1074	0/0:32,0:32:87.25:0,87,2126	0/0:18,0:18:48.16:0,48,1189	0/0:23,0:23:69.24:0,69,1768	1/1:3,37:40:99:1950,111,0	0/0:16,0:16:48.16:0,48,1188	0/0:24,0:24:72.25:0,72,1834	0/0:25,0:25:66.21:0,66,1551	0/0:24,0:24:63.22:0,63,1600	0/0:19,0:19:51.18:0,51,1324	0/0:18,0:18:51.17:0,51,1267	0/0:15,0:15:42.14:0,42,1054	0/0:28,0:28:84.29:0,84,2171	0/0:28,0:28:75.26:0,75,1918	0/0:18,0:18:51.15:0,51,1256	0/0:26,0:26:75.25:0,75,1818	0/0:28,0:28:72.25:0,72,1808	0/0:25,0:25:66.21:0,66,1634	0/0:33,0:33:96.33:0,96,2404	0/0:24,0:24:69.22:0,69,1675	0/0:16,0:16:39.13:0,39,991	0/0:21,0:21:51.18:0,51,1303	0/0:31,0:31:78.27:0,78,1990	0/0:33,0:33:99:0,99,2533	0/0:15,0:15:45.15:0,45,1168
chr10	47574900	.	A	AT	1180.25	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-5.450;DP=675;FS=1.426;HRun=2;HaplotypeScore=107.0733;InbreedingCoeff=0.9987;MQ=88.92;MQ0=0;MQRankSum=-0.349;QD=34.71;ReadPosRankSum=-5.068;VQSLOD=1.9556;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,135,1622	0/0:11,0:11:33.10:0,33,409	0/0:27,0:27:74.96:0,75,878	0/0:31,0:31:61.33:0,61,897	0/0:23,0:23:69.22:0,69,854	0/0:27,0:26:81.23:0,81,979	0/0:20,0:20:54.11:0,54,639	1/1:4,30:34:90.04:1275,90,0	0/0:23,0:23:66.19:0,66,795	0/0:26,0:26:69.22:0,69,855	0/0:19,0:19:54.14:0,54,643	0/0:23,0:23:69.22:0,69,855	0/0:20,0:20:54.17:0,54,669	0/0:28,0:28:84.23:0,84,1005	0/0:25,0:25:75.22:0,75,917	0/0:29,0:29:81.24:0,81,992	0/0:30,0:30:84.26:0,84,1041	0/0:17,0:17:51.13:0,51,615	0/0:17,0:17:45.14:0,45,558	0/0:27,0:27:78.24:0,78,956	0/0:18,0:18:51.16:0,51,632	0/0:29,0:29:81.25:0,81,994	0/0:17,0:17:48.11:0,48,556	0/0:22,0:22:63.19:0,63,769	0/0:21,0:21:60.19:0,60,744	0/0:25,0:25:72.23:0,72,893	0/0:30,0:30:81.25:0,81,1004	0/0:10,0:10:27.08:0,27,334
chr10	47577259	.	CTCTTAA	C	827.20	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.000;DP=681;FS=4.230;HRun=0;HaplotypeScore=139.2248;InbreedingCoeff=0.9446;MQ=84.62;MQ0=0;MQRankSum=-5.922;QD=68.93;ReadPosRankSum=0.739;VQSLOD=4.4144;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,123,4569	0/0:14,0:14:39.13:0,39,1468	0/0:23,0:23:69.24:0,69,2473	0/0:19,0:19:54.17:0,54,1761	0/0:22,0:22:66.23:0,66,2368	0/0:19,0:19:57.18:0,57,1944	0/0:19,0:19:57.20:0,57,2130	0/0:30,0:30:90.31:0,90,3297	0/0:21,0:21:63.22:0,63,2286	0/0:28,0:28:84.29:0,84,2863	0/0:20,0:20:60.21:0,60,2223	0/0:29,0:29:87.30:0,87,3104	0/0:33,0:33:99:0,99,3697	0/0:25,0:25:75.24:0,75,2675	0/0:37,0:37:99:0,108,4005	1/1:0,12:12:36.12:922,36,0	0/0:32,0:32:96.29:0,96,3310	0/0:17,0:17:51.18:0,51,1920	0/0:19,0:19:57.20:0,57,2039	0/0:34,0:34:99:0,99,3709	0/0:31,0:31:93.32:0,93,3407	0/0:33,0:33:99:0,99,3722	0/0:20,0:20:60.21:0,60,2215	0/0:27,0:27:81.28:0,81,3050	0/0:15,0:15:45.15:0,45,1692	0/0:27,0:26:78.27:0,78,2849	0/0:31,0:31:93.30:0,93,3392	0/0:3,0:3:8.98:0,9,73
chr10	47578816	.	G	GGT	647.20	PASS	AB=0.844;AC=18;AF=0.321;AN=56;BaseQRankSum=7.815;DP=594;FS=10.024;HRun=0;HaplotypeScore=117.4548;InbreedingCoeff=-0.2642;MQ=71.13;MQ0=2;MQRankSum=-1.520;QD=1.91;ReadPosRankSum=-5.060;VQSLOD=-0.7242;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:25:27.79:134,0,28	1/1:8,0:8:11.56:71,12,0	0/1:18,0:15:14.22:14,0,237	0/1:11,0:11:15.86:16,0,66	0/1:15,0:21:86.25:86,0,196	0/1:14,0:14:45.06:45,0,60	0/0:10,0:13:7.59:0,8,140	0/1:21,0:38:99:249,0,220	0/0:15,0:15:10.96:0,11,155	0/1:9,0:14:12.33:12,0,153	0/1:19,0:21:1.66:2,0,157	0/0:22,0:26:48.19:0,48,444	0/0:20,0:21:31.60:0,32,408	0/1:17,0:17:2.53:3,0,136	0/1:12,0:12:2.56:3,0,66	0/1:13,1:21:41.22:41,0,132	0/0:18,0:39:48.57:0,49,405	0/1:6,1:20:10.81:11,0,111	0/1:15,0:21:10.77:11,0,253	0/1:13,0:31:71.36:71,0,204	0/1:13,0:15:28.26:28,0,111	0/0:21,0:22:36.11:0,36,535	0/0:15,0:19:46.91:0,47,417	0/0:32,0:33:77.40:0,77,758	0/0:16,0:28:10.39:0,10,198	0/1:19,0:31:4.90:5,0,385	0/0:13,0:25:42.46:0,42,315	0/0:6,0:12:11.24:0,11,105
chr10	47579559	.	A	AC	8298.83	PASS	AB=0.962;AC=28;AF=0.500;AN=56;BaseQRankSum=1.401;DP=592;FS=0.000;HRun=7;HaplotypeScore=99.8732;InbreedingCoeff=0.8858;MQ=76.62;MQ0=0;MQRankSum=-1.288;QD=25.38;ReadPosRankSum=3.192;VQSLOD=4.8848;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:75.07:0,75,715	0/1:11,1:12:0.18:0,0,282	0/1:15,0:16:19.84:20,0,251	0/0:17,0:17:41.06:0,41,356	1/1:3,20:24:41.20:536,41,0	0/0:23,0:23:60.09:0,60,579	0/0:20,0:20:57.09:0,57,550	0/0:17,0:17:45.07:0,45,435	0/0:13,0:13:36.06:0,36,347	1/1:3,13:17:41.99:483,42,0	1/1:2,12:15:10.01:384,10,0	0/0:27,0:27:78.12:0,78,752	0/0:19,0:19:42.01:0,42,396	1/1:4,25:29:69.21:833,69,0	0/0:18,0:18:51.07:0,51,487	0/0:17,0:17:45.07:0,45,435	1/1:7,35:42:61.30:1022,61,0	1/1:2,18:20:51.11:600,51,0	1/1:1,9:10:27.08:326,27,0	1/1:0,14:14:42.13:507,42,0	1/1:9,47:56:99:1340,111,0	0/0:15,0:15:39.06:0,39,376	0/0:16,0:16:39.06:0,39,376	0/0:29,0:29:78.12:0,78,753	1/1:2,24:26:43.24:800,43,0	1/1:1,17:18:51.16:616,51,0	1/1:3,14:18:45.14:543,45,0	1/1:0,10:10:24.07:290,24,0
chr10	47581175	.	AAAAC	A	3606.74	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=9.415;DP=657;FS=1.503;HRun=0;HaplotypeScore=149.4336;InbreedingCoeff=0.9954;MQ=65.09;MQ0=2;MQRankSum=-1.496;QD=32.79;ReadPosRankSum=1.485;VQSLOD=3.5290;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:60.19:0,60,1352	0/0:11,0:11:33.11:0,33,701	0/0:31,0:21:42.01:0,42,607	0/0:26,0:19:23.69:0,24,536	0/0:30,0:30:81.24:0,81,1807	0/0:26,0:26:60.20:0,60,1380	0/0:18,0:18:45.15:0,45,992	0/0:32,0:31:75.20:0,75,1389	0/0:28,0:28:75.24:0,75,1665	0/0:26,0:26:63.21:0,63,1313	0/0:22,0:22:57.18:0,57,1186	0/0:18,0:18:39.13:0,39,862	0/0:14,0:14:30.10:0,30,663	1/1:3,17:20:36.12:614,36,0	0/0:21,0:21:48.15:0,48,1052	0/0:25,0:25:66.22:0,66,1412	0/0:49,0:49:99:0,123,2890	0/0:22,0:22:51.11:0,51,1176	1/1:7,12:19:36.11:564,36,0	1/1:1,25:26:75.18:1151,75,0	1/1:2,9:11:15.05:256,15,0	0/0:18,0:18:42.13:0,42,911	0/0:21,0:21:57.19:0,57,1375	0/0:23,0:23:60.20:0,60,1456	0/0:24,0:24:60.20:0,60,1389	0/0:28,0:28:84.21:0,84,1796	1/1:5,29:34:60.68:1023,61,0	0/0:10,0:10:30.10:0,30,664
chr10	47581811	.	T	TA	2174.06	PASS	AB=0.746;AC=28;AF=0.500;AN=56;BaseQRankSum=-5.742;DP=563;FS=2.169;HRun=16;HaplotypeScore=67.0010;InbreedingCoeff=-0.0552;MQ=69.60;MQ0=5;MQRankSum=0.361;QD=4.92;ReadPosRankSum=-1.690;VQSLOD=1.5870;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:22:3:0,3,170	0/1:4,5:10:19.36:70,0,19	0/1:32,0:12:6.94:16,0,7	0/1:21,0:11:1.53:2,0,23	1/1:9,11:20:8.08:147,8,0	1/1:4,9:15:3.35:135,3,0	0/1:5,9:14:29.21:114,0,29	0/0:13,0:17:8.97:0,9,35	0/0:15,3:20:15.22:0,15,170	1/1:11,19:30:22.07:271,22,0	0/1:6,13:19:1.14:86,0,1	0/1:14,1:15:2.78:3,0,70	0/0:15,0:18:18.37:0,18,95	0/0:10,0:25:18.36:0,18,57	0/1:16,14:30:74.49:127,0,74	0/1:11,11:22:9.57:120,0,10	0/1:9,13:23:55.95:151,0,56	0/1:11,9:21:19.32:76,0,19	1/1:11,14:24:38.60:283,39,0	1/1:12,11:26:21.98:215,22,0	0/1:9,6:16:18.71:47,0,19	0/1:9,1:10:9.80:10,0,38	0/1:12,0:13:10.87:11,0,15	0/0:17,0:19:36.04:0,36,195	0/1:4,11:16:19.32:74,0,19	0/1:11,8:19:15.38:69,0,15	0/1:10,19:29:0.76:183,0,1	1/1:5,9:15:17.81:134,18,0
chr10	47582095	.	C	CT	1613.58	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-9.661;DP=677;FS=20.909;HRun=5;HaplotypeScore=78.8189;InbreedingCoeff=0.9908;MQ=87.44;MQ0=0;MQRankSum=0.100;QD=29.34;ReadPosRankSum=-1.780;VQSLOD=1.5671;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,129,1358	0/0:7,0:7:15.04:0,15,161	0/0:31,0:31:75.13:0,75,772	0/0:18,0:18:27.40:0,27,417	0/0:22,0:22:63.14:0,63,668	0/0:32,0:32:90.22:0,90,964	0/0:26,0:26:72.18:0,72,773	1/1:6,27:33:81.26:1064,81,0	0/0:31,0:31:81.20:0,81,870	0/0:20,0:20:51.12:0,51,548	0/0:20,0:20:51.12:0,51,548	0/0:20,0:20:48.09:0,48,500	0/0:25,0:25:66.17:0,66,709	1/1:1,21:22:51.17:671,51,0	0/0:35,0:35:90.20:0,90,957	0/0:24,0:24:63.16:0,63,677	0/0:21,0:21:60.15:0,60,645	0/0:19,0:19:57.14:0,57,611	0/0:17,0:17:45.11:0,45,484	0/0:23,0:23:66.17:0,66,709	0/0:39,0:39:99:0,105,1120	0/0:16,0:16:48.12:0,48,516	0/0:25,0:25:54.13:0,54,580	0/0:28,0:28:81.18:0,81,861	0/0:17,0:17:51.11:0,51,540	0/0:20,0:20:54.13:0,54,575	0/0:33,0:33:96.21:0,96,1015	0/0:9,0:9:27.07:0,27,290
chr10	47582289	.	GAC	G	1469.89	PASS	AB=1.000;AC=40;AF=0.870;AN=46;BaseQRankSum=0.431;DP=320;FS=20.898;HRun=0;HaplotypeScore=49.6016;InbreedingCoeff=0.2186;MQ=37.10;MQ0=74;MQRankSum=1.112;QD=5.55;ReadPosRankSum=2.141;VQSLOD=0.4747;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:15:20.88:165,21,0	./.	./.	./.	1/1:8,0:6:5.52:44,6,0	0/0:17,0:11:5.83:0,6,39	0/0:13,0:9:3.44:0,3,22	1/1:10,0:2:2.96:19,3,0	./.	1/1:10,6:10:12.61:81,13,0	1/1:1,0:1:3:25,3,0	1/1:12,0:9:8.99:76,9,0	1/1:10,0:7:8.98:73,9,0	0/1:11,0:7:16.99:19,0,17	1/1:17,0:9:8.98:72,9,0	1/1:16,0:15:17.98:150,18,0	0/1:20,0:12:10.83:74,0,11	1/1:17,0:15:17.57:113,18,0	1/1:14,0:6:5.98:100,6,0	./.	1/1:18,0:10:3:25,3,0	1/1:12,0:10:14.98:123,15,0	1/1:6,0:5:3:25,3,0	1/1:15,0:10:2.99:24,3,0	1/1:10,0:8:5.58:49,6,0	1/1:3,8:9:25.54:172,26,0	1/1:12,0:9:8.94:67,9,0	1/1:8,0:4:11.93:92,12,0
chr10	47582835	.	ATGG	A	1121.42	PASS	AB=0.846;AC=13;AF=0.232;AN=56;BaseQRankSum=2.630;DP=586;FS=4.180;HRun=0;HaplotypeScore=126.6394;InbreedingCoeff=-0.0476;MQ=65.64;MQ0=7;MQRankSum=-8.634;QD=5.66;ReadPosRankSum=-4.797;VQSLOD=0.5436;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:30:48.88:0,49,1121	1/1:8,0:8:2.68:11,3,0	0/0:42,0:26:63.52:0,64,1637	0/0:36,0:18:47.99:0,48,1104	0/0:14,11:25:17.93:0,18,383	0/0:15,0:15:5.92:0,6,52	0/1:23,0:23:23.74:24,0,26	0/1:22,10:31:99:406,0,1431	0/0:21,0:21:38.52:0,39,689	0/1:7,10:16:99:385,0,428	0/0:7,0:7:6.02:0,6,72	0/0:15,0:15:25.50:0,26,503	0/0:26,1:26:45.99:0,46,1050	0/1:18,0:17:69.82:70,0,534	0/1:17,0:17:24.53:25,0,148	0/0:27,0:27:75.71:0,76,1305	0/0:17,0:18:5.89:0,6,78	0/0:20,0:20:18.01:0,18,213	0/1:20,4:24:84.69:85,0,1273	0/1:17,0:17:29.27:29,0,251	0/0:19,7:26:35.53:0,36,816	0/0:17,0:17:42.03:0,42,810	0/0:14,0:14:21.07:0,21,456	0/0:23,4:27:44.84:0,45,1009	0/0:17,0:17:6.01:0,6,60	0/1:16,8:23:99:160,0,1022	0/1:6,6:10:20.93:21,0,386	1/1:0,5:5:3.01:56,3,0
chr10	47582838	.	G	GCGCGCACACACACACA	8370.38	PASS	AB=0.781;AC=36;AF=0.643;AN=56;BaseQRankSum=3.172;DP=684;FS=1.479;HRun=0;HaplotypeScore=223.4295;InbreedingCoeff=-0.1128;MQ=62.03;MQ0=9;MQRankSum=-8.980;QD=14.48;ReadPosRankSum=-1.167;VQSLOD=3.6417;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:43:76.31:76,0,520	1/1:0,0:10:3.01:48,3,0	0/0:41,0:24:53.15:0,53,1142	0/0:37,0:18:43.33:0,43,767	1/1:24,0:24:14.63:208,15,0	0/1:2,0:27:7.80:95,0,8	1/1:1,0:26:12.04:226,12,0	0/1:31,0:30:99:1002,0,765	0/1:15,0:26:99:179,0,215	1/1:20,0:19:44.70:1008,45,0	1/1:4,0:16:3.01:180,3,0	0/1:9,0:19:50.61:51,0,130	0/1:18,0:30:79.49:79,0,475	0/1:14,0:24:99:492,0,288	0/1:0,0:20:5.72:416,0,6	0/0:9,0:28:74.30:0,74,2305	1/1:3,10:23:11.77:550,12,0	1/1:2,8:22:12.04:633,12,0	0/1:22,0:22:23.45:300,0,23	1/1:1,0:22:3.01:218,3,0	0/1:30,0:30:7.74:43,0,8	0/1:14,0:22:4.61:5,0,342	0/1:12,0:16:16.84:17,0,185	0/1:27,0:28:87.54:88,0,436	1/1:2,10:25:3.48:238,3,0	1/1:26,0:25:57.61:1553,58,0	0/1:13,0:11:1.56:426,0,2	1/1:6,0:6:3.01:239,3,0
chr10	47583071	.	CAT	C	1635.28	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=2.455;DP=749;FS=1.333;HRun=0;HaplotypeScore=108.8978;InbreedingCoeff=0.9986;MQ=86.33;MQ0=0;MQRankSum=0.090;QD=38.94;ReadPosRankSum=-1.961;VQSLOD=4.6270;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:67,0:66:99:0,196,3919	0/0:11,0:11:33.11:0,33,670	0/0:22,0:22:63.14:0,63,1166	0/0:29,0:29:83.85:0,84,1572	0/0:19,0:19:51.14:0,51,950	0/0:18,0:17:42.13:0,42,816	0/0:35,0:35:99:0,102,2022	1/1:0,24:24:72.21:1122,72,0	0/0:29,0:29:84.27:0,84,1618	0/0:12,0:12:36.07:0,36,689	0/0:12,0:12:33.09:0,33,632	0/0:32,0:32:93.29:0,93,1803	0/0:23,0:23:66.21:0,66,1284	1/1:0,18:18:39.13:635,39,0	0/0:37,0:37:99:0,108,2144	0/0:33,0:33:90.30:0,90,1769	0/0:39,0:39:99:0,117,2191	0/0:32,0:32:93.30:0,93,1835	0/0:25,0:25:72.16:0,72,1309	0/0:23,0:23:69.24:0,69,1399	0/0:47,0:47:99:0,135,2671	0/0:24,0:24:65.23:0,65,1203	0/0:22,0:22:57.14:0,57,1046	0/0:39,0:39:99:0,114,2277	0/0:18,0:18:54.19:0,54,1095	0/0:33,0:33:96.32:0,96,1914	0/0:18,0:17:51.16:0,51,984	0/0:8,0:8:24.08:0,24,487
chr10	47583386	.	T	TA	2666.72	PASS	AB=0.841;AC=23;AF=0.411;AN=56;BaseQRankSum=-7.608;DP=552;FS=0.000;HRun=13;HaplotypeScore=78.5097;InbreedingCoeff=0.6938;MQ=80.19;MQ0=1;MQRankSum=-0.464;QD=9.84;ReadPosRankSum=1.819;VQSLOD=3.1655;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,33:44:0.39:549,0,0	0/0:7,0:7:8.88:0,9,62	0/0:19,0:19:18.88:0,19,184	0/1:18,0:17:1.05:1,0,66	0/0:26,1:29:20.70:0,21,271	0/1:11,1:12:1.08:1,0,138	0/0:21,0:24:54.63:0,55,361	0/0:10,0:33:43.88:0,44,138	0/1:4,8:12:40.73:91,0,41	0/0:33,1:36:45.31:0,45,299	0/0:10,1:11:17.78:0,18,123	1/1:8,16:25:21.29:325,21,0	1/1:4,14:18:21.02:195,21,0	0/0:3,0:15:20.83:0,21,59	0/0:18,0:18:26.67:0,27,185	0/0:2,0:18:28.47:0,28,82	0/0:13,0:13:22.74:0,23,149	0/0:13,2:14:7.81:0,8,198	1/1:7,12:21:24.26:342,24,0	1/1:11,16:28:44.85:397,45,0	1/1:4,7:11:0.47:147,0,0	1/1:14,13:28:10.53:220,11,0	1/1:5,7:15:21.64:170,22,0	1/1:7,8:15:18.02:167,18,0	0/0:15,2:17:7.77:0,8,196	0/0:22,0:23:12.82:0,13,203	1/1:6,17:23:12.92:259,13,0	0/0:1,0:1:2.98:0,3,21
chr10	47585245	.	CTGTGTG	C	1673.41	PASS	AB=0.879;AC=24;AF=0.462;AN=52;BaseQRankSum=3.576;DP=621;FS=6.432;HRun=0;HaplotypeScore=142.8998;InbreedingCoeff=0.3872;MQ=61.17;MQ0=19;MQRankSum=-3.176;QD=5.16;ReadPosRankSum=0.542;VQSLOD=2.2312;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:31:4.24:0,4,91	1/1:9,0:10:3.73:16,4,0	./.	./.	0/0:21,0:21:27.07:0,27,612	1/1:15,0:22:6.02:84,6,0	1/1:24,2:27:12.04:204,12,0	0/0:25,0:25:3.93:0,4,24	0/0:13,0:18:9.48:0,9,181	0/1:22,0:20:13.86:14,0,64	0/1:12,0:18:5.72:6,0,44	0/0:24,0:24:21.07:0,21,577	0/0:13,0:19:12.04:0,12,316	0/0:21,0:21:22.91:0,23,249	1/1:23,7:31:24.04:386,24,0	1/1:10,6:18:13.40:221,13,0	0/1:17,0:17:11.91:12,0,30	0/1:18,1:20:16.53:53,0,17	1/1:16,3:18:6.02:116,6,0	1/1:20,5:25:11.99:171,12,0	1/1:29,0:27:14.32:150,14,0	0/0:17,0:20:9.03:0,9,238	0/0:14,0:20:10.23:0,10,300	0/0:26,0:27:23.95:0,24,558	0/1:11,2:14:28.05:109,0,28	0/1:20,0:25:31.76:32,0,36	1/1:19,4:24:15.05:282,15,0	0/0:7,0:9:1.74:0,2,20
chr10	47585917	.	T	TAC	1140.94	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-7.228;DP=758;FS=0.684;HRun=0;HaplotypeScore=91.1260;InbreedingCoeff=0.9496;MQ=65.57;MQ0=2;MQRankSum=-0.210;QD=32.60;ReadPosRankSum=1.485;VQSLOD=5.8476;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:26:60.01:0,60,703	0/0:12,0:12:36.11:0,36,443	0/0:23,0:19:42.13:0,42,508	0/0:22,0:21:15.70:0,16,447	0/0:33,0:33:81.21:0,81,970	0/0:21,0:21:57.18:0,57,698	0/0:19,0:19:18.68:0,19,388	0/0:40,0:40:87.26:0,87,1061	0/0:23,0:23:66.19:0,66,799	0/0:43,0:45:99:0,102,1211	0/0:18,0:18:36.11:0,36,443	0/0:13,0:13:33.09:0,33,393	0/0:22,0:22:57.18:0,57,698	0/0:24,1:25:17.25:0,17,714	0/0:35,0:35:87.26:0,87,1058	1/1:8,26:35:44.34:1236,44,0	0/0:31,0:31:72.21:0,72,872	0/0:13,0:13:33.10:0,33,406	0/0:27,0:27:57.13:0,57,673	0/0:38,0:38:84.26:0,84,1034	0/0:56,0:56:99:0,144,1772	0/0:27,0:27:60.17:0,60,714	0/0:31,0:31:78.23:0,78,946	0/0:29,0:29:43.19:0,43,704	0/0:13,0:14:38.94:0,39,444	0/0:34,0:34:87.27:0,87,1071	0/0:32,0:32:75.23:0,75,923	0/0:14,0:14:13.56:0,14,384
chr10	47586158	.	TTTTG	T	4319.60	PASS	AB=1.000;AC=25;AF=0.446;AN=56;BaseQRankSum=-12.030;DP=585;FS=0.000;HRun=0;HaplotypeScore=168.1513;InbreedingCoeff=0.2312;MQ=59.09;MQ0=8;MQRankSum=1.660;QD=11.19;ReadPosRankSum=-0.798;VQSLOD=3.9134;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:14,15:29:59.63:1025,60,0	0/0:9,0:9:18:0,18,160	0/0:21,0:12:21.05:0,21,424	0/0:14,0:11:18.05:0,18,323	0/1:31,0:31:21.56:22,0,317	0/0:25,0:25:31.24:0,31,347	0/0:21,0:21:3.92:0,4,179	0/1:25,0:25:47.72:48,0,75	1/1:3,15:18:21.07:351,21,0	0/1:44,0:44:43.75:44,0,471	0/1:28,0:28:9.16:9,0,357	1/1:2,13:15:30.10:501,30,0	1/1:7,10:17:48.16:791,48,0	0/1:11,0:11:0.47:0,0,103	0/0:15,0:15:18.01:0,18,218	0/0:22,0:22:48.16:0,48,1094	0/1:20,0:19:17.64:18,0,159	0/0:24,0:24:16.21:0,16,282	0/1:22,0:22:83.86:84,0,194	0/1:29,0:28:45.19:45,0,252	0/1:15,0:15:62.40:62,0,83	1/1:3,17:20:36.04:528,36,0	1/1:6,8:14:33.10:524,33,0	1/1:3,6:9:12.04:201,12,0	0/0:14,0:14:26.99:0,27,236	0/1:26,0:26:62.15:62,0,220	0/0:34,0:34:49.57:0,50,643	0/1:13,0:12:4.99:5,0,183
chr10	47586169	.	T	TG	11854.46	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=0.278;DP=594;FS=5.150;HRun=1;HaplotypeScore=119.3244;InbreedingCoeff=0.9924;MQ=52.52;MQ0=8;MQRankSum=-4.706;QD=29.13;ReadPosRankSum=1.537;VQSLOD=4.5927;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:93.03:0,93,637	1/1:0,8:8:18.06:268,18,0	0/0:23,0:10:20.08:0,20,254	0/0:12,0:9:18.06:0,18,234	1/1:0,35:35:69.08:973,69,0	1/1:0,26:26:45.15:669,45,0	1/1:3,17:20:38.76:496,39,0	1/1:8,0:24:53.29:648,53,0	0/0:16,0:16:22.21:0,22,109	1/1:2,41:43:99:1537,117,0	1/1:2,29:31:65.94:852,66,0	0/0:17,0:17:36.47:0,36,225	0/0:17,0:17:47.72:0,48,243	1/1:5,0:14:36.03:456,36,0	1/1:0,18:18:30.10:445,30,0	0/0:19,0:19:57.08:0,57,701	1/1:3,15:17:21.42:364,21,0	1/1:3,21:24:43.40:577,43,0	1/1:3,17:20:52.85:678,53,0	1/1:3,25:27:53.88:712,54,0	1/1:0,15:15:29.91:383,30,0	0/0:20,0:20:38.81:0,39,231	0/0:19,0:19:52.74:0,53,391	0/0:7,0:7:13.99:0,14,87	1/1:0,15:15:27.09:403,27,0	1/1:1,21:22:55.01:726,55,0	1/1:3,30:33:73.36:1174,73,0	1/1:1,12:12:33.11:491,33,0
chr10	47586173	.	TG	T	3982.11	PASS	AB=1.000;AC=43;AF=0.768;AN=56;BaseQRankSum=10.996;DP=588;FS=2.121;HRun=1;HaplotypeScore=142.5800;InbreedingCoeff=0.3078;MQ=51.82;MQ0=10;MQRankSum=-2.594;QD=7.50;ReadPosRankSum=7.705;VQSLOD=0.6671;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:35,0:35:99:119,0,171	1/1:8,0:8:15.34:63,15,0	0/0:23,0:9:21.04:0,21,263	0/0:13,0:9:18.04:0,18,240	1/1:33,0:33:56.29:229,56,0	1/1:24,0:24:36.99:144,37,0	1/1:19,0:19:33.17:145,33,0	1/1:5,20:25:59.63:533,60,0	0/1:17,0:17:30.34:30,0,51	1/1:39,0:39:84.78:391,85,0	1/1:29,0:29:50.17:240,50,0	0/1:18,0:18:36.94:37,0,122	0/1:18,0:18:14.18:109,0,14	1/1:0,12:12:29.90:245,30,0	1/1:20,0:20:29.42:140,29,0	0/0:21,0:21:57.12:0,57,746	1/1:16,0:15:25.06:110,25,0	1/1:21,0:21:37.47:153,37,0	1/1:18,0:18:15.89:91,16,0	1/1:28,0:27:41.34:215,41,0	1/1:15,0:15:24.93:115,25,0	0/1:20,0:20:59.80:60,0,185	0/1:18,0:18:77.10:77,0,162	0/1:11,0:11:8.81:9,0,83	1/1:15,0:15:26.62:127,27,0	1/1:25,0:25:14.94:214,15,0	1/1:34,0:34:55.50:276,56,0	1/1:13,0:12:27.49:109,27,0
chr10	47586186	.	C	CT	588.15	PASS	AC=4;AF=0.074;AN=54;BaseQRankSum=-0.485;DP=596;FS=7.152;HRun=7;HaplotypeScore=146.5456;InbreedingCoeff=0.9766;MQ=50.72;MQ0=11;MQRankSum=-6.339;QD=16.80;ReadPosRankSum=-1.997;VQSLOD=1.8552;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:76.67:0,77,728	0/0:10,0:10:24.03:0,24,231	./.	0/0:11,0:7:12.01:0,12,112	0/0:33,0:33:54.07:0,54,515	0/0:19,0:19:39.06:0,39,376	0/0:22,0:21:33.04:0,33,318	1/1:8,14:22:36.11:432,36,0	0/0:16,0:16:24.02:0,24,232	0/0:42,0:42:93.09:0,93,888	0/0:32,0:32:60.08:0,60,575	0/0:21,0:21:57.09:0,57,550	0/0:19,0:19:51.08:0,51,492	1/1:2,11:13:26.96:277,27,0	0/0:23,0:23:45.07:0,45,434	0/0:16,0:16:36.05:0,36,348	0/0:17,0:16:42.05:0,42,398	0/0:19,0:19:42.05:0,42,398	0/0:18,0:18:33.02:0,33,314	0/0:32,0:30:50.83:0,51,490	0/0:14,0:14:24.04:0,24,232	0/0:22,0:22:51.08:0,51,492	0/0:23,0:23:54.08:0,54,521	0/0:10,0:10:24.04:0,24,232	0/0:17,0:18:27.32:0,27,356	0/0:26,0:26:60.09:0,60,578	0/0:37,0:37:81.12:0,81,781	0/0:12,0:11:21.03:0,21,203
chr10	47586276	.	G	GT	5203.79	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-14.401;DP=644;FS=1.148;HRun=7;HaplotypeScore=71.6734;InbreedingCoeff=0.9830;MQ=62.60;MQ0=1;MQRankSum=2.863;QD=28.91;ReadPosRankSum=2.233;VQSLOD=5.4526;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,42:42:99:1450,120,0	0/0:9,0:9:24.03:0,24,226	0/0:18,0:15:6.77:0,7,249	0/0:22,0:16:29.68:0,30,263	0/0:22,0:22:54.08:0,54,521	0/0:24,0:24:69.09:0,69,661	0/0:19,0:19:57.09:0,57,547	0/0:26,0:26:51.05:0,51,484	1/1:7,6:13:36.10:422,36,0	0/0:27,0:27:66.10:0,66,637	0/0:18,0:18:48.06:0,48,458	1/1:2,18:20:42.13:507,42,0	1/1:3,26:29:60.02:725,60,0	0/0:24,0:24:72.11:0,72,693	0/0:28,0:28:75.09:0,75,713	0/0:24,0:24:72.12:0,72,695	0/0:27,0:27:69.08:0,69,654	0/0:21,0:21:39.22:0,39,477	0/0:22,0:22:60.09:0,60,579	0/0:30,0:30:78.11:0,78,753	0/0:13,0:13:33.05:0,33,318	1/1:1,28:29:75.23:903,75,0	1/1:4,26:30:57.16:689,57,0	1/1:1,16:17:42.13:507,42,0	0/0:24,0:24:69.09:0,69,661	0/0:25,0:25:57.08:0,57,546	0/0:28,0:27:65.97:0,66,634	0/0:11,0:11:33.05:0,33,319
chr10	47587232	.	G	GAA	13075.85	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-3.209;DP=691;FS=12.186;HRun=10;HaplotypeScore=103.1929;InbreedingCoeff=0.9910;MQ=78.33;MQ0=0;MQRankSum=-0.965;QD=28.36;ReadPosRankSum=-0.458;VQSLOD=3.5321;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:33:59.51:0,60,705	1/1:2,5:8:12.51:180,13,0	0/0:25,0:23:43.81:0,44,384	0/0:24,0:24:42.52:0,43,334	1/1:2,30:34:86.74:1236,87,0	1/1:3,13:19:43.61:563,44,0	1/1:5,11:16:30.10:448,30,0	1/1:15,0:31:16.08:254,16,0	0/0:25,0:25:57.09:0,57,580	1/1:2,20:24:62.11:786,62,0	1/1:1,29:35:91.67:1205,92,0	0/0:24,0:25:59.79:0,60,644	0/0:20,0:20:54.09:0,54,549	1/1:2,1:21:42.94:184,43,0	1/1:1,13:17:40.60:519,41,0	1/1:2,2:23:57.08:573,57,0	1/1:4,27:32:65.71:948,66,0	1/1:5,10:17:34.15:444,34,0	1/1:8,21:31:69.18:941,69,0	1/1:12,19:34:74.07:975,74,0	1/1:1,6:9:15.04:198,15,0	0/0:21,0:21:51.11:0,51,519	0/0:25,0:26:70.42:0,70,687	0/0:28,0:28:66.61:0,67,673	1/1:0,24:30:78.69:1011,79,0	1/1:3,36:42:89.26:1565,89,0	1/1:10,11:22:44.07:557,44,0	1/1:3,11:14:33.11:492,33,0
chr10	47587905	.	G	GA	1290.96	PASS	AB=0.948;AC=6;AF=0.107;AN=56;BaseQRankSum=-0.672;DP=627;FS=6.926;HRun=10;HaplotypeScore=69.0341;InbreedingCoeff=0.6671;MQ=75.59;MQ0=0;MQRankSum=-1.003;QD=12.18;ReadPosRankSum=-4.809;VQSLOD=1.9662;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:76.13:0,76,634	0/0:6,0:6:17.98:0,18,148	0/1:16,1:17:3.48:3,0,138	0/0:16,0:17:27.60:0,28,186	0/0:32,1:33:45.89:0,46,584	0/0:17,0:17:34.95:0,35,274	0/1:18,1:20:11:11,0,322	1/1:5,33:38:48.09:880,48,0	0/0:21,0:21:55.49:0,55,447	0/0:23,0:24:67.95:0,68,546	0/0:22,1:23:15.93:0,16,337	0/0:18,0:18:47.93:0,48,394	0/0:19,0:20:46.96:0,47,375	1/1:7,22:31:28.61:526,29,0	0/0:24,0:24:62.90:0,63,514	0/0:28,0:28:14.40:0,14,441	0/0:22,0:23:55.88:0,56,436	0/0:15,0:15:29.92:0,30,240	0/0:20,0:20:44.88:0,45,364	0/0:30,0:30:68.83:0,69,560	0/0:26,0:25:71.89:0,72,588	0/0:25,0:26:58.96:0,59,474	0/0:21,0:22:55.79:0,56,438	0/0:18,0:18:44.93:0,45,369	0/0:17,0:18:21.23:0,21,325	0/0:21,0:21:53.93:0,54,443	0/0:25,0:24:59.90:0,60,489	0/0:16,0:16:38.93:0,39,320
chr10	47588409	.	G	GTTTA	25550.58	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-6.501;DP=567;FS=29.603;HRun=0;HaplotypeScore=76.0680;InbreedingCoeff=0.9912;MQ=71.09;MQ0=1;MQRankSum=-7.278;QD=48.12;ReadPosRankSum=4.551;VQSLOD=3.4182;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,25:30:60.12:1404,60,0	1/1:3,8:11:24.08:592,24,0	0/0:24,0:24:48.14:0,48,768	0/0:12,0:12:20.20:0,20,321	1/1:10,15:26:45.05:932,45,0	1/1:2,11:13:24.08:600,24,0	1/1:5,18:23:48.16:1157,48,0	1/1:14,18:34:69.19:1416,69,0	1/1:8,15:23:48.16:1194,48,0	1/1:4,21:25:69.23:1605,69,0	1/1:4,15:20:42.10:978,42,0	1/1:2,19:20:51.18:1287,51,0	1/1:4,8:13:27.09:627,27,0	1/1:4,8:14:30.10:740,30,0	1/1:7,12:21:27.09:602,27,0	1/1:4,12:16:36.12:875,36,0	1/1:5,16:21:48.16:1210,48,0	1/1:5,22:28:57.15:1383,57,0	1/1:10,9:19:27.07:612,27,0	1/1:5,12:18:27.09:617,27,0	1/1:2,10:12:24.08:600,24,0	1/1:2,14:17:42.06:996,42,0	1/1:4,19:23:37.37:887,37,0	1/1:1,14:15:30.10:759,30,0	1/1:4,25:30:54.19:1358,54,0	1/1:9,18:27:57.20:1382,57,0	1/1:3,16:19:39.13:981,39,0	1/1:1,11:12:30.10:756,30,0
chr10	47589025	.	AAG	A	15472.74	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-4.129;DP=698;FS=7.612;HRun=0;HaplotypeScore=92.7428;InbreedingCoeff=0.9979;MQ=75.25;MQ0=4;MQRankSum=-3.124;QD=24.60;ReadPosRankSum=5.851;VQSLOD=5.5111;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,33:37:84.26:1018,84,0	1/1:0,11:11:30.07:363,30,0	0/0:33,0:29:47.94:0,48,686	0/0:36,0:27:36.52:0,37,449	1/1:4,20:24:60:660,60,0	1/1:2,19:21:48.15:582,48,0	1/1:3,20:23:54.17:654,54,0	1/1:15,17:32:51.07:540,51,0	1/1:4,29:33:69.21:836,69,0	1/1:8,15:23:41.96:454,42,0	1/1:8,16:24:51.03:568,51,0	1/1:7,34:41:84.26:1018,84,0	1/1:5,15:20:27.08:327,27,0	1/1:7,19:26:51.16:618,51,0	1/1:6,18:25:50.99:596,51,0	1/1:10,16:26:36.11:436,36,0	1/1:2,20:22:51.16:618,51,0	1/1:2,23:25:66.20:800,66,0	1/1:7,19:26:54.16:651,54,0	1/1:3,13:16:39.09:457,39,0	1/1:6,24:30:56.96:667,57,0	1/1:6,13:19:30.01:336,30,0	1/1:6,9:15:27.08:324,27,0	1/1:1,14:15:39.12:473,39,0	1/1:2,13:15:33.10:400,33,0	1/1:5,28:32:81.13:951,81,0	1/1:4,25:29:60.18:727,60,0	1/1:3,14:17:33.10:400,33,0
chr10	47589775	.	A	AGAGAAAATTGGTTTTCTCCAA	639.92	PASS	AB=0.661;AC=2;AF=0.50;AN=4;BaseQRankSum=0.198;DP=8;FS=8.451;HRun=0;HaplotypeScore=45.6804;MQ=237.76;MQ0=0;MQRankSum=-0.198;QD=91.42;ReadPosRankSum=1.495;VQSLOD=1.9240;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/1:1,1:4:22.27:444,0,22	0/1:2,0:3:11.45:261,0,11	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.
chr10	47591270	.	C	CTCAT	2675.88	PASS	AB=0.811;AC=15;AF=0.278;AN=54;BaseQRankSum=8.905;DP=588;FS=33.124;HRun=0;HaplotypeScore=227.9641;InbreedingCoeff=-0.0385;MQ=36.64;MQ0=9;MQRankSum=-7.861;QD=10.17;ReadPosRankSum=2.796;VQSLOD=1.6068;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:13,1:14:8.59:9,0,139	0/0:7,0:7:11.94:0,12,135	0/0:37,0:13:24.05:0,24,435	0/0:23,0:10:17.44:0,17,359	0/0:26,10:37:18.51:0,19,299	0/1:11,4:15:71.02:71,0,137	0/0:20,0:20:27.07:0,27,516	0/1:38,3:39:99:261,0,1529	1/1:10,3:13:3.46:79,3,0	0/1:20,8:28:99:705,0,822	0/0:26,5:31:8.87:0,9,171	1/1:12,6:18:5.03:86,5,0	0/1:6,8:16:56.33:65,0,56	1/1:4,6:10:0.47:2,0,0	0/0:24,11:35:17.69:0,18,295	0/0:9,0:9:2.99:0,3,52	./.	0/1:18,1:19:92.94:93,0,597	0/0:14,0:10:0.08:0,0,320	0/0:23,7:30:24.29:0,24,348	0/0:18,0:18:8.97:0,9,107	0/0:21,1:22:7.99:0,8,187	0/1:20,8:28:0.54:1,0,60	0/0:8,0:8:9.03:0,9,188	0/0:14,7:21:4.55:0,5,107	0/1:19,9:28:99:684,0,686	0/1:23,10:32:99:761,0,540	0/0:5,0:5:6.02:0,6,125
chr10	47591297	.	ACACT	A	1595.91	PASS	AB=0.930;AC=11;AF=0.196;AN=56;BaseQRankSum=11.276;DP=632;FS=86.462;HRun=0;HaplotypeScore=251.6351;InbreedingCoeff=-0.1508;MQ=39.30;MQ0=11;MQRankSum=-8.526;QD=7.98;ReadPosRankSum=3.740;VQSLOD=-0.6189;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:12.26:0,12,348	0/1:6,1:7:16.59:17,0,481	0/0:44,0:19:48.81:0,49,1401	0/0:40,0:19:39.33:0,39,1183	0/0:30,4:34:24.31:0,24,691	0/1:14,1:15:22.81:23,0,482	0/0:24,0:24:48.66:0,49,1160	0/1:35,0:32:99:153,0,1876	0/1:10,1:11:26.29:37,0,26	0/1:23,4:27:99:554,0,948	0/0:27,8:35:27.06:0,27,558	0/1:14,0:14:34.10:34,0,50	0/1:14,1:15:41.94:42,0,156	1/1:10,0:10:0.20:1,0,0	0/0:35,1:36:56.46:0,56,1109	0/0:14,0:14:12.83:0,13,267	0/0:11,0:11:11.96:0,12,211	0/0:29,0:29:17.73:0,18,2073	0/0:9,0:7:21.06:0,21,539	0/0:21,6:27:29.99:0,30,822	0/0:27,0:27:23.75:0,24,688	0/0:23,1:24:11.26:0,11,267	0/0:20,6:26:6.37:0,6,179	0/0:11,0:11:12.04:0,12,347	0/0:18,4:22:17.91:0,18,419	0/1:30,3:33:99:468,0,1463	0/1:30,3:32:99:405,0,1217	0/0:6,0:6:9.03:0,9,260
chr10	47591311	.	T	TCACACACA	3471.10	PASS	AB=0.992;AC=41;AF=0.788;AN=52;BaseQRankSum=-2.783;DP=656;FS=4.578;HRun=0;HaplotypeScore=324.5678;InbreedingCoeff=0.0108;MQ=40.18;MQ0=14;MQRankSum=1.050;QD=6.15;ReadPosRankSum=1.631;VQSLOD=1.6170;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:16:12.93:211,13,0	0/1:7,0:7:21.97:22,0,74	./.	./.	1/1:42,0:42:15.21:170,15,0	0/1:15,0:16:25.48:25,0,93	0/1:25,0:25:6.36:6,0,192	0/0:25,0:23:3:0,3,40	1/1:7,0:15:6.02:153,6,0	1/1:28,0:28:2.67:105,3,0	0/1:33,0:33:7.18:141,0,7	1/1:7,8:19:6.02:181,6,0	1/1:16,0:16:11.78:206,12,0	0/0:11,0:11:1.45:0,1,4	0/1:39,0:38:99:134,0,168	1/1:13,0:16:21.05:360,21,0	1/1:13,0:13:16.07:75,16,0	1/1:35,0:34:18.09:262,18,0	1/1:5,0:5:3.90:49,4,0	0/1:34,0:34:15.68:154,0,16	1/1:29,0:29:16.17:54,16,0	1/1:27,0:26:5.71:124,6,0	1/1:26,0:27:4.38:96,4,0	1/1:13,0:13:12.04:262,12,0	1/1:28,0:28:8.04:120,8,0	1/1:38,0:37:40.70:356,41,0	0/1:33,0:32:2.23:123,0,2	1/1:10,0:10:12.74:80,13,0
chr10	47591338	.	C	CACAA	10290.09	PASS	AB=1.000;AC=38;AF=0.679;AN=56;BaseQRankSum=-1.160;DP=678;FS=6.890;HRun=0;HaplotypeScore=167.2988;InbreedingCoeff=0.3341;MQ=49.78;MQ0=14;MQRankSum=-0.836;QD=18.24;ReadPosRankSum=4.289;VQSLOD=3.8709;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:24:41.66:42,0,111	1/1:0,0:11:11.92:88,12,0	0/0:20,0:7:17.87:0,18,155	0/0:31,0:15:31.97:0,32,335	1/1:30,5:35:54.07:664,54,0	1/1:13,0:19:39.69:311,40,0	1/1:1,0:24:38.63:288,39,0	0/0:30,0:28:62.47:0,62,512	0/1:18,0:18:27.37:27,0,33	1/1:19,3:23:21.12:529,21,0	1/1:29,3:34:65.34:818,65,0	0/0:22,0:22:5.23:0,5,109	0/1:21,0:21:12.23:12,0,168	0/0:11,0:11:11.80:0,12,81	1/1:18,0:35:67.77:579,68,0	0/1:19,0:19:70.37:188,0,70	1/1:2,12:17:15.05:403,15,0	1/1:20,18:39:33.32:1740,33,0	0/1:9,0:9:12.46:162,0,12	1/1:16,9:27:59.77:1063,60,0	1/1:2,36:44:23.44:573,23,0	0/1:28,0:27:1.45:1,0,145	0/1:20,0:20:53.47:53,0,76	0/1:16,0:16:31.52:32,0,84	1/1:20,5:25:18.69:539,19,0	1/1:25,5:30:2.78:896,3,0	1/1:17,9:26:27.11:898,27,0	1/1:2,12:14:15.05:384,15,0
chr10	47591640	.	GGT	G	607.53	PASS	AB=0.873;AC=15;AF=0.288;AN=52;BaseQRankSum=-0.811;DP=562;FS=0.000;HRun=0;HaplotypeScore=96.9590;InbreedingCoeff=0.2508;MQ=65.46;MQ0=11;MQRankSum=0.422;QD=3.04;ReadPosRankSum=2.254;VQSLOD=2.0603;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:26:13.98:14,0,158	0/0:8,0:10:7.39:0,7,36	./.	0/0:35,0:24:0:0,0,0	0/0:15,0:15:5.66:0,6,33	0/1:20,0:30:3.91:4,0,20	0/0:26,0:26:7.57:0,8,86	./.	1/1:16,2:19:7.56:72,8,0	0/1:22,0:22:14.20:14,0,116	0/1:10,3:13:47.22:47,0,121	1/1:15,3:18:14.81:129,15,0	0/1:7,3:10:32.24:56,0,32	0/1:10,5:16:0.91:55,0,1	0/0:17,0:24:2.60:0,3,10	0/0:17,0:19:18.03:0,18,210	0/0:13,0:18:15.01:0,15,149	0/0:14,0:18:8.85:0,9,106	0/0:15,0:16:14.54:0,15,130	0/0:16,0:14:2.99:0,3,24	0/0:38,0:44:11.26:0,11,78	0/1:9,3:12:5.29:83,0,5	1/1:10,2:12:6.01:65,6,0	1/1:15,4:19:25.85:223,26,0	0/0:17,0:17:3.03:0,3,101	0/0:16,0:20:22.18:0,22,181	0/0:6,0:12:6.01:0,6,63	0/0:6,0:7:6:0,6,52
chr10	47591950	.	CAA	C	3832.29	PASS	AB=0.693;AC=29;AF=0.518;AN=56;BaseQRankSum=-5.368;DP=574;FS=0.377;HRun=15;HaplotypeScore=90.8584;InbreedingCoeff=0.6227;MQ=74.86;MQ0=0;MQRankSum=2.734;QD=10.53;ReadPosRankSum=2.802;VQSLOD=2.7021;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,11:21:6.96:259,7,0	0/0:4,0:10:23.93:0,24,136	0/0:32,0:22:20.01:0,20,244	0/1:15,1:17:3.25:3,0,121	0/0:9,0:21:28.42:0,28,138	0/0:9,0:16:26.46:0,26,139	0/0:5,0:8:15.49:0,15,84	1/1:11,15:28:44.52:376,45,0	1/1:10,12:22:40.24:364,40,0	0/1:9,4:28:53.41:53,0,128	0/0:9,1:23:19.48:0,19,239	1/1:19,5:27:23.03:313,23,0	1/1:14,15:29:21.66:339,22,0	1/1:9,6:16:8.82:123,9,0	0/0:6,0:17:28.55:0,29,127	0/0:23,0:24:62.61:0,63,685	0/1:11,3:20:42.21:42,0,91	0/0:2,0:13:30.43:0,30,117	1/1:5,10:18:32.25:300,32,0	0/1:10,12:24:44.75:242,0,45	1/1:2,13:15:15.15:293,15,0	1/1:5,8:14:11.60:192,12,0	1/1:7,15:23:38.38:328,38,0	1/1:2,15:23:19.89:332,20,0	0/1:9,2:19:17.90:18,0,125	0/0:12,0:24:26.48:0,26,246	1/1:7,10:20:26.24:252,26,0	0/0:9,1:21:7.39:0,7,108
chr10	47593231	.	G	GT	1375.53	PASS	AB=0.787;AC=19;AF=0.339;AN=56;BaseQRankSum=-5.130;DP=588;FS=8.622;HRun=14;HaplotypeScore=83.2239;InbreedingCoeff=0.2269;MQ=73.57;MQ0=1;MQRankSum=1.457;QD=4.98;ReadPosRankSum=-3.243;VQSLOD=1.1101;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:8,12:22:8.86:157,0,9	0/0:10,0:13:13.75:0,14,82	0/0:35,1:19:9.77:0,10,100	0/1:19,0:12:1.09:1,0,39	0/0:25,0:31:12.80:0,13,223	0/0:20,1:22:24.62:0,25,282	0/0:16,1:19:11.10:0,11,191	1/1:12,11:25:6.13:177,6,0	1/1:7,9:16:1.41:116,1,0	0/0:22,0:22:19.13:0,19,164	0/0:27,0:27:42.75:0,43,282	0/1:11,6:17:36.22:85,0,36	1/1:5,15:20:17.84:146,18,0	0/1:14,3:17:15.10:104,0,15	0/0:20,1:22:7.27:0,7,170	0/1:10,19:29:37.83:199,0,38	0/1:16,1:21:3.15:3,0,205	0/0:20,0:20:9.47:0,9,181	0/0:16,0:29:12.65:0,13,103	0/0:5,0:18:20.71:0,21,70	0/0:4,0:9:13.13:0,13,49	1/1:2,12:15:23.79:191,24,0	1/1:7,11:18:10.57:206,11,0	0/1:7,13:21:27.94:143,0,28	0/0:13,5:20:0.37:0,0,106	0/1:22,4:27:3.40:3,0,188	0/0:9,0:23:26.88:0,27,89	0/1:5,1:6:12.17:12,0,52
chr10	47593598	.	AACAC	A	10558.44	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=3.653;DP=888;FS=13.888;HRun=0;HaplotypeScore=234.0934;InbreedingCoeff=0.9804;MQ=58.21;MQ0=10;MQRankSum=-3.378;QD=29.49;ReadPosRankSum=2.858;VQSLOD=3.5752;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:80,0:80:99:0,120,2819	1/1:3,8:11:24.08:407,24,0	0/0:45,0:27:43.90:0,44,890	0/0:52,0:31:49.55:0,50,889	1/1:6,21:27:68.93:898,69,0	1/1:4,16:19:45.07:674,45,0	1/1:9,18:26:38.62:505,39,0	0/0:28,0:31:50.03:0,50,805	0/0:36,0:37:56.58:0,57,1294	1/1:10,22:29:81.21:1249,81,0	1/1:4,12:15:29.44:378,29,0	0/0:53,0:52:99:0,117,2695	0/0:31,0:33:56.97:0,57,1285	0/0:16,0:38:62.74:0,63,1095	1/1:9,17:25:45.04:666,45,0	0/0:14,0:36:50.52:0,51,872	1/1:8,19:27:44.90:763,45,0	1/1:5,8:12:11.64:392,12,0	1/1:13,8:19:36.04:513,36,0	1/1:4,15:19:42.11:679,42,0	1/1:16,21:36:37.65:737,38,0	0/0:32,0:32:65.72:0,66,1396	0/0:33,0:33:63.20:0,63,1526	0/0:48,0:49:86.77:0,87,2010	1/1:2,22:25:63.16:1012,63,0	1/1:19,17:33:7.37:934,7,0	1/1:2,8:11:20.67:355,21,0	1/1:0,8:9:14.33:395,14,0
chr10	47593669	.	C	CACACACCT	18440.14	PASS	AB=0.858;AC=47;AF=0.839;AN=56;BaseQRankSum=-3.594;DP=920;FS=24.749;HRun=0;HaplotypeScore=391.3492;InbreedingCoeff=0.2776;MQ=32.67;MQ0=16;MQRankSum=0.076;QD=23.05;ReadPosRankSum=1.764;VQSLOD=3.0950;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:21,28:50:2.04:9,2,0	1/1:7,6:13:11.96:404,12,0	0/0:54,0:12:30.01:0,30,428	0/0:66,0:20:20.05:0,20,933	0/1:19,14:33:0.30:0,0,1	1/1:19,6:24:17.84:442,18,0	1/1:20,4:23:10.93:327,11,0	0/1:30,0:27:10.64:731,0,11	1/1:25,12:36:6.07:574,6,0	1/1:40,30:64:30.17:4904,30,0	1/1:20,8:27:2.90:81,3,0	1/1:24,20:38:23.78:600,24,0	1/1:29,14:43:49.14:980,49,0	1/1:23,0:31:13.51:314,14,0	1/1:25,26:52:46.89:1082,47,0	1/1:25,11:36:39.20:1213,39,0	1/1:13,0:13:2.42:76,2,0	1/1:4,1:4:6.49:200,6,0	0/1:22,9:28:64.58:1276,0,65	1/1:15,16:31:12.84:392,13,0	0/1:23,0:20:5.44:41,0,5	1/1:21,15:36:14.28:362,14,0	0/1:20,6:25:10.85:112,0,11	1/1:24,3:26:2.58:93,3,0	1/1:15,8:23:8.60:129,9,0	1/1:28,16:42:32.89:2755,33,0	1/1:8,10:18:39.08:1216,39,0	1/1:2,1:2:3.01:128,3,0
chr10	47593675	.	C	CCT	4129.19	PASS	AB=0.946;AC=30;AF=0.536;AN=56;BaseQRankSum=-3.233;DP=921;FS=0.000;HRun=0;HaplotypeScore=398.5206;InbreedingCoeff=-0.3438;MQ=31.25;MQ0=17;MQRankSum=-0.503;QD=5.60;ReadPosRankSum=6.592;VQSLOD=1.2689;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:45:4.47:0,4,21	1/1:11,2:13:6.12:33,6,0	0/0:53,0:11:33.03:0,33,457	0/0:64,0:19:20.34:0,20,763	0/1:28,3:31:0:1,0,0	0/1:22,2:23:11.43:95,0,11	0/1:24,0:23:25.60:86,0,26	0/1:25,2:25:99:288,0,304	0/1:39,1:39:16.75:205,0,17	0/1:65,3:63:99:1085,0,407	1/1:26,3:28:1.70:5,2,0	0/1:41,7:43:56.90:176,0,57	0/1:47,1:47:99:173,0,248	1/1:29,0:28:2.09:63,2,0	1/1:51,2:53:10.87:230,11,0	0/1:32,4:36:8.73:198,0,9	0/1:9,1:10:11.98:12,0,32	0/1:6,0:6:16.11:16,0,71	0/1:34,0:29:99:180,0,332	1/1:29,1:30:7.90:50,8,0	0/1:22,2:21:16.87:17,0,26	0/1:36,4:40:13.38:197,0,13	0/1:23,2:24:6.25:47,0,6	0/1:26,1:26:15.77:70,0,16	0/0:21,0:21:4.77:0,5,17	0/1:47,0:45:99:587,0,418	0/1:18,1:19:99:265,0,158	1/1:3,0:2:3.01:51,3,0
chr10	47593681	.	CAT	C	707.71	PASS	AB=0.934;AC=24;AF=0.429;AN=56;BaseQRankSum=1.141;DP=902;FS=5.737;HRun=0;HaplotypeScore=405.6851;InbreedingCoeff=-0.3060;MQ=30.52;MQ0=12;MQRankSum=1.646;QD=1.07;ReadPosRankSum=-3.943;VQSLOD=0.2126;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,9:44:0.25:0,0,5	0/1:13,1:14:3.60:4,0,26	0/0:52,0:8:4.85:0,5,270	0/0:55,1:19:56.50:0,57,790	0/1:29,2:31:0.40:0,0,1	0/1:22,2:23:29.12:29,0,59	0/1:22,0:21:32.94:33,0,34	0/1:19,2:18:99:137,0,391	0/1:35,4:38:22.78:68,0,23	0/1:66,1:65:25.79:26,0,1145	0/0:30,1:30:2.36:0,2,9	0/1:46,4:44:40.89:61,0,41	0/1:44,1:44:32.70:33,0,387	0/1:24,4:27:14.57:15,0,30	0/1:47,7:54:25.81:26,0,153	0/1:31,3:34:46.83:47,0,101	0/1:9,2:11:10.96:11,0,82	0/0:6,0:6:11.82:0,12,151	0/0:33,0:30:41.60:0,42,718	0/1:33,0:33:3.22:3,0,55	0/0:17,2:16:2.72:0,3,13	1/1:36,4:40:8.32:110,8,0	1/1:24,2:25:4.48:49,4,0	0/1:22,3:24:0.03:0,0,2	0/1:20,1:21:9.75:10,0,11	0/1:46,3:48:99:134,0,820	0/1:21,0:21:31.69:32,0,349	1/1:3,0:2:3:28,3,0
chr10	47593683	.	T	TAC	855.62	PASS	AB=0.974;AC=24;AF=0.429;AN=56;BaseQRankSum=3.942;DP=879;FS=4.241;HRun=0;HaplotypeScore=399.5637;InbreedingCoeff=-0.2866;MQ=30.39;MQ0=12;MQRankSum=1.283;QD=1.34;ReadPosRankSum=3.753;VQSLOD=0.9584;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:4.47:0,4,21	0/1:13,0:13:5.37:5,0,13	0/0:50,0:8:2.81:0,3,184	0/0:55,0:19:33.61:0,34,580	0/1:30,0:30:0.11:0,0,1	0/1:21,2:22:20.09:20,0,23	0/1:21,1:21:4.18:4,0,42	0/1:19,0:16:28.19:28,0,294	0/1:36,2:37:10.56:22,0,11	0/1:62,2:61:99:404,0,564	1/1:28,0:27:1.81:5,2,0	0/1:50,1:45:13.91:14,0,18	0/1:44,2:45:3.26:3,0,108	0/0:30,1:30:3.02:0,3,39	0/1:55,0:55:6.54:7,0,78	0/1:32,0:32:39.94:40,0,83	0/1:10,1:11:10.95:11,0,66	0/0:5,0:5:1.36:0,1,75	0/1:31,0:28:7.50:7,0,406	0/0:34,0:34:1.24:0,1,22	0/0:17,2:16:2.83:0,3,15	1/1:39,0:39:10.36:63,10,0	0/1:24,0:23:2.33:2,0,7	0/1:23,0:22:0.03:0,0,0	0/1:17,1:18:8.79:27,0,9	0/1:45,2:45:99:236,0,422	0/1:22,0:22:82.25:82,0,193	1/1:3,0:2:2.60:10,3,0
chr10	47593698	.	ACT	A	1102.32	PASS	AB=0.978;AC=30;AF=0.556;AN=54;BaseQRankSum=0.115;DP=854;FS=9.809;HRun=0;HaplotypeScore=376.3180;InbreedingCoeff=-0.3146;MQ=31.25;MQ0=9;MQRankSum=0.494;QD=1.44;ReadPosRankSum=-6.596;VQSLOD=0.0142;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:40,1:43:25.55:169,26,0	0/1:13,0:13:21.17:53,0,21	0/0:47,0:9:1.07:0,1,183	0/1:48,0:14:7.23:7,0,219	0/1:24,0:24:0.01:0,0,0	0/0:20,0:19:11.88:0,12,52	0/1:28,0:28:13.94:14,0,29	0/1:18,0:16:41.90:62,0,42	0/1:37,4:40:5.09:100,0,5	0/1:64,0:62:99:101,0,144	1/1:22,0:22:1.83:9,2,0	1/1:46,5:46:8.18:124,8,0	0/1:45,4:48:49.48:130,0,49	0/1:33,0:33:16.32:29,0,16	0/1:50,0:50:44.45:44,0,75	0/1:32,0:31:58.59:59,0,64	0/1:9,0:9:2.78:8,0,3	0/1:6,0:6:4.17:13,0,4	0/1:34,0:30:62.80:118,0,63	0/1:34,0:34:20.91:21,0,30	0/1:21,1:19:5.76:15,0,6	0/1:27,5:32:0.08:0,0,1	1/1:22,2:24:2.97:13,3,0	1/1:20,0:19:1.92:18,2,0	1/1:15,0:15:1.98:17,2,0	0/1:50,0:47:27.88:118,0,28	0/0:21,0:21:5.52:0,6,43	./.
chr10	47593700	.	TCACA	T	7390.57	PASS	AB=0.847;AC=43;AF=0.796;AN=54;BaseQRankSum=-3.433;DP=856;FS=3.808;HRun=0;HaplotypeScore=361.9599;InbreedingCoeff=0.2811;MQ=31.29;MQ0=10;MQRankSum=-0.868;QD=10.01;ReadPosRankSum=0.371;VQSLOD=3.0033;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:36,0:42:30.02:182,30,0	1/1:5,7:12:8.50:55,9,0	0/0:47,0:12:18.45:0,18,329	0/0:46,0:12:26.99:0,27,452	0/1:5,19:24:0.43:1,0,0	1/1:8,13:20:7.83:112,8,0	0/1:14,14:29:4.72:16,0,5	1/1:10,9:16:29.28:567,29,0	1/1:35,0:41:1.14:122,1,0	1/1:26,38:62:76.66:2218,77,0	1/1:1,19:21:0.82:2,1,0	0/1:44,0:47:17.41:129,0,17	0/1:28,0:46:99:135,0,114	1/1:13,21:34:5.49:49,5,0	1/1:21,30:51:0.06:122,0,0	1/1:11,22:32:20.90:188,21,0	1/1:4,4:8:9.95:162,10,0	1/1:6,3:9:0.75:148,1,0	1/1:17,16:30:4.18:811,4,0	1/1:7,26:33:5.18:45,5,0	0/0:20,1:19:1.94:0,2,12	0/1:26,0:32:0.15:1,0,0	1/1:16,0:23:2.99:24,3,0	1/1:17,0:20:2.87:20,3,0	1/1:6,10:16:2.29:14,2,0	1/1:18,31:47:98.80:1765,99,0	1/1:4,18:22:29.14:504,29,0	./.
chr10	47593704	.	A	ACACT	2548.62	PASS	AB=0.982;AC=34;AF=0.630;AN=54;BaseQRankSum=2.825;DP=867;FS=31.342;HRun=0;HaplotypeScore=384.0077;InbreedingCoeff=0.0071;MQ=31.20;MQ0=10;MQRankSum=-0.776;QD=3.50;ReadPosRankSum=-3.196;VQSLOD=0.7776;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:38,5:43:17.13:151,17,0	0/1:11,0:11:1.87:12,0,2	0/0:49,0:9:21.04:0,21,295	0/0:45,0:11:26.98:0,27,351	0/1:23,0:23:0.01:0,0,0	1/1:21,0:20:4.21:24,4,0	1/1:28,0:28:1.77:12,2,0	0/1:20,0:17:18.52:106,0,19	1/1:35,6:40:36.78:264,37,0	0/1:65,0:63:99:481,0,284	0/0:21,0:21:1.61:0,2,5	1/1:46,7:50:19.70:224,20,0	1/1:29,19:47:48.09:703,48,0	1/1:35,0:34:5.09:25,5,0	0/1:47,0:47:2.90:3,0,18	0/1:34,0:33:5.90:60,0,6	0/1:9,0:9:28.26:28,0,51	0/1:11,0:11:19.37:19,0,54	0/1:33,0:31:99:135,0,153	1/1:33,0:33:2.71:15,3,0	0/0:22,0:18:3.45:0,3,20	1/1:28,6:34:1.80:6,2,0	0/1:19,6:26:1.03:13,0,1	1/1:18,4:21:2.68:19,3,0	1/1:16,0:16:5.58:29,6,0	0/1:51,0:48:99:315,0,211	0/1:23,0:23:55.01:55,0,106	./.
chr10	47593711	.	CCT	C	62.34	PASS	AB=0.960;AC=10;AF=0.179;AN=56;BaseQRankSum=4.834;DP=830;FS=24.097;HRun=0;HaplotypeScore=350.2869;InbreedingCoeff=-0.1081;MQ=31.65;MQ0=3;MQRankSum=-0.276;QD=0.23;ReadPosRankSum=-3.346;VQSLOD=0.8839;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,5:40:17.86:0,18,426	0/0:11,1:12:10.05:0,10,89	0/0:41,0:11:23.42:0,23,347	0/1:35,3:10:23.89:24,0,312	0/0:24,0:24:0:0,0,0	0/0:16,2:18:5.09:0,5,25	0/1:28,0:27:1.89:2,0,159	0/0:25,0:21:23.95:0,24,514	0/1:36,2:38:13.70:14,0,361	0/0:63,0:61:48.35:0,48,1296	0/0:22,0:22:3.01:0,3,44	0/0:46,0:45:23.93:0,24,414	0/1:44,0:43:31.62:32,0,541	0/1:31,1:32:21.13:21,0,63	0/1:39,1:40:16.63:17,0,39	0/0:34,0:33:0.38:0,0,228	0/0:10,0:10:4.52:0,5,133	0/1:10,2:12:42.34:42,0,152	0/0:32,0:31:45.02:0,45,764	0/0:31,0:31:2.96:0,3,20	1/1:24,1:21:2.80:11,3,0	0/0:32,0:32:2.66:0,3,12	0/0:23,1:24:3.07:0,3,11	0/0:17,6:22:3.01:0,3,34	0/1:16,0:16:27.43:27,0,47	0/0:49,1:46:32.79:0,33,965	0/0:24,0:24:16.52:0,17,277	0/0:1,0:1:3.01:0,3,39
chr10	47593733	.	TACAC	T	2584.32	PASS	AB=0.983;AC=25;AF=0.446;AN=56;BaseQRankSum=1.728;DP=903;FS=14.804;HRun=0;HaplotypeScore=322.7947;InbreedingCoeff=-0.1320;MQ=30.56;MQ0=17;MQRankSum=-0.124;QD=3.83;ReadPosRankSum=4.850;VQSLOD=0.8501;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:29,10:37:36.75:451,37,0	0/0:14,0:13:11.38:0,11,97	0/0:26,0:7:6.90:0,7,103	0/0:25,0:7:6.02:0,6,111	0/0:25,0:24:0:0,0,0	0/1:22,0:18:0:0,0,1	0/1:28,0:25:0.73:32,0,1	0/1:53,0:33:99:210,0,297	0/1:40,5:43:93.73:246,0,94	0/1:59,0:54:99:152,0,590	0/0:23,0:20:2.94:0,3,18	0/1:50,3:49:99:199,0,147	1/1:32,4:37:1.67:509,2,0	0/0:44,0:36:1.78:0,2,51	0/1:42,0:39:35.66:49,0,36	0/1:35,0:33:37.17:37,0,61	0/1:14,0:13:43.58:44,0,48	0/0:19,0:17:21.30:0,21,159	0/1:31,0:24:99:191,0,110	0/0:30,0:29:2.91:0,3,18	1/1:37,0:29:2.90:8,3,0	1/1:31,5:34:1.09:3,1,0	0/1:26,2:28:17.54:28,0,18	1/1:28,1:27:2.43:21,2,0	0/0:22,0:20:1.81:0,2,5	0/1:57,0:44:99:348,0,245	0/1:22,0:21:81.91:197,0,82	1/1:4,0:3:2.80:7,3,0
chr10	47593739	.	C	CAT	105.09	PASS	AB=0.986;AC=17;AF=0.315;AN=54;BaseQRankSum=0.129;DP=965;FS=36.241;HRun=0;HaplotypeScore=332.3506;InbreedingCoeff=0.1754;MQ=29.49;MQ0=24;MQRankSum=-0.460;QD=0.24;ReadPosRankSum=8.696;VQSLOD=0.9149;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:39:30.25:0,30,261	0/0:13,0:12:1.54:0,2,12	0/0:20,0:5:7.23:0,7,70	0/0:20,0:5:9.02:0,9,114	./.	0/0:23,0:19:2.96:0,3,6	0/0:32,0:28:3.07:0,3,80	0/0:60,0:33:38.50:0,39,358	0/1:48,1:47:12.15:12,0,99	0/0:62,0:55:36.92:0,37,333	0/1:24,0:21:0:0,0,0	0/1:57,2:55:12.63:13,0,71	0/0:43,0:43:11.68:0,12,175	1/1:49,0:41:6.32:27,6,0	0/1:42,0:39:6.57:21,0,7	0/1:39,0:36:15.68:16,0,36	0/1:16,0:16:1.79:2,0,25	0/1:20,0:18:9.90:26,0,10	0/0:36,0:26:43.83:0,44,348	0/1:29,0:28:0.12:0,0,0	0/0:37,1:29:0.65:0,1,2	0/0:41,0:39:5.28:0,5,39	0/0:30,0:28:5.77:0,6,31	1/1:33,0:33:1.81:7,2,0	0/0:28,0:26:1.24:0,1,3	0/1:54,0:39:24.44:24,0,85	1/1:23,1:23:14.39:87,14,0	1/1:5,0:4:3.37:9,3,0
chr10	47593741	.	C	CACAT	11604.99	PASS	AB=0.711;AC=37;AF=0.661;AN=56;BaseQRankSum=-4.566;DP=992;FS=15.043;HRun=0;HaplotypeScore=312.8214;InbreedingCoeff=0.1776;MQ=29.51;MQ0=27;MQRankSum=-0.835;QD=13.34;ReadPosRankSum=4.718;VQSLOD=3.1521;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:37,4:38:43.11:495,43,0	0/1:6,6:12:11.91:35,0,12	0/0:17,0:5:7.27:0,7,95	0/0:19,0:5:6.02:0,6,99	0/0:12,17:27:0:0,0,0	0/1:14,11:21:0.01:0,0,0	1/1:27,8:30:12.42:106,12,0	0/1:57,8:36:98.98:1022,0,99	1/1:29,23:50:44.54:794,45,0	1/1:33,28:53:86.46:2205,86,0	0/0:14,12:23:2.62:0,3,18	1/1:28,33:58:21.82:692,22,0	1/1:29,14:44:57.48:1199,57,0	0/1:21,27:41:11.53:151,0,12	0/1:22,22:42:23.56:90,0,24	0/1:18,22:37:34.99:195,0,35	1/1:12,7:18:12.82:259,13,0	1/1:10,10:18:14.25:619,14,0	0/1:27,7:24:11.73:687,0,12	0/0:15,15:30:5.88:0,6,38	1/1:32,7:31:1.29:4,1,0	1/1:20,21:39:6.23:50,6,0	1/1:14,16:28:2.99:24,3,0	0/1:28,8:35:0.87:69,0,1	1/1:11,17:26:2.79:55,3,0	1/1:25,32:41:91.77:2020,92,0	0/1:7,17:23:0.05:674,0,0	1/1:2,3:4:6.02:161,6,0
chr10	47593743	.	C	CAT	3740.41	PASS	AB=0.993;AC=23;AF=0.426;AN=54;BaseQRankSum=-0.393;DP=1020;FS=14.217;HRun=0;HaplotypeScore=337.5491;InbreedingCoeff=-0.0525;MQ=27.26;MQ0=31;MQRankSum=-1.764;QD=5.05;ReadPosRankSum=8.413;VQSLOD=1.1216;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:41,2:38:37.60:226,38,0	0/0:12,0:11:0.88:0,1,11	0/0:16,0:5:6.48:0,6,75	0/0:16,0:2:6.02:0,6,86	./.	0/0:24,0:20:2.96:0,3,6	0/1:38,0:33:5.05:5,0,63	0/1:67,0:36:99:320,0,126	0/1:53,1:51:25.72:221,0,26	0/1:62,0:53:99:605,0,108	0/0:28,0:25:0:0,0,0	1/1:64,0:59:10.52:285,11,0	0/1:44,2:45:67.39:429,0,67	0/1:50,0:42:8.25:48,0,8	0/1:47,0:43:2.51:40,0,3	0/1:46,0:42:21.32:66,0,21	0/1:20,0:19:13.01:91,0,13	0/1:21,0:19:46.81:169,0,47	0/1:32,0:22:65.53:230,0,66	0/0:31,0:30:2.54:0,3,19	0/0:44,0:34:2.15:0,2,9	0/0:45,0:43:11.98:0,12,105	0/0:32,1:31:2.99:0,3,23	0/1:36,1:36:2.30:35,0,2	0/1:29,0:27:0.15:2,0,0	1/1:55,1:40:14.04:645,14,0	1/1:24,0:23:8.24:269,8,0	1/1:5,0:4:6.01:55,6,0
chr10	47593747	.	CAT	C	900.77	PASS	AB=0.973;AC=25;AF=0.446;AN=56;BaseQRankSum=5.130;DP=1056;FS=18.374;HRun=0;HaplotypeScore=347.9113;InbreedingCoeff=-0.1598;MQ=27.54;MQ0=35;MQRankSum=-0.120;QD=1.05;ReadPosRankSum=-6.905;VQSLOD=-0.1266;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:43,3:41:9.39:197,9,0	0/1:10,1:10:4.03:11,0,4	0/1:14,0:4:3.96:4,0,47	0/0:12,0:2:5.98:0,6,54	0/1:30,0:27:0:0,0,0	1/1:22,4:21:5.60:29,6,0	1/1:39,0:34:0.09:61,0,0	0/1:70,0:36:7.66:8,0,496	0/1:57,3:57:57.28:57,0,149	0/1:63,4:57:36.03:36,0,1020	0/0:24,1:22:0:0,0,0	0/1:74,2:70:50.22:50,0,219	0/1:43,1:43:99:121,0,108	0/0:50,4:45:5.30:0,5,72	0/1:45,2:42:7.27:9,0,7	0/1:45,2:43:56.53:89,0,57	0/1:19,0:18:45.21:92,0,45	0/0:20,2:20:18.23:0,18,433	0/1:33,0:22:99:107,0,232	1/1:29,3:31:11.43:74,11,0	0/1:43,2:35:0.31:3,0,0	0/0:43,2:43:15.82:0,16,94	0/0:33,1:32:5.92:0,6,41	0/1:41,1:40:1.77:2,0,2	0/1:29,1:27:9.02:9,0,17	0/1:55,0:40:18.98:19,0,685	0/1:24,1:24:71.02:71,0,155	0/0:5,0:4:5.95:0,6,44
chr10	47593750	.	A	ACT	85.33	PASS	AB=0.985;AC=7;AF=0.130;AN=54;BaseQRankSum=6.408;DP=1097;FS=15.155;HRun=0;HaplotypeScore=367.0495;InbreedingCoeff=0.0127;MQ=27.83;MQ0=40;MQRankSum=-1.219;QD=0.31;ReadPosRankSum=-2.978;VQSLOD=0.7329;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:47,3:45:21.28:0,21,101	0/1:14,0:12:9.76:10,0,10	0/0:13,0:3:9.02:0,9,115	0/0:13,0:2:6.02:0,6,77	./.	1/1:27,0:22:0.09:0,0,0	0/0:37,0:32:5.58:0,6,67	0/0:73,0:40:83.60:0,84,902	0/1:61,1:59:29.11:29,0,131	0/0:72,0:61:99:0,119,1501	0/0:27,0:24:0:0,0,0	0/1:77,0:70:45.54:46,0,143	0/1:46,1:46:84.91:85,0,205	0/0:55,0:46:7.89:0,8,70	0/0:49,0:44:8.49:0,8,63	0/0:48,0:44:26.72:0,27,209	0/0:19,0:18:13.47:0,13,94	0/0:22,0:20:32.93:0,33,495	0/0:33,0:21:51.39:0,51,565	0/0:34,0:33:8.38:0,8,60	0/0:48,0:36:1.56:0,2,8	0/0:44,0:42:17.92:0,18,144	0/0:34,1:33:5.92:0,6,42	0/1:46,1:45:26.42:26,0,28	0/0:34,0:31:3.21:0,3,34	0/0:56,0:40:75.11:0,75,955	0/0:25,0:24:29.53:0,30,260	0/0:5,0:4:6.01:0,6,60
chr10	47593759	.	T	TAC	2676.70	PASS	AB=0.844;AC=17;AF=0.315;AN=54;BaseQRankSum=-3.618;DP=1154;FS=5.631;HRun=0;HaplotypeScore=360.8681;InbreedingCoeff=0.4852;MQ=28.31;MQ0=45;MQRankSum=5.361;QD=5.60;ReadPosRankSum=-0.609;VQSLOD=1.7277;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:50,5:50:5.18:109,5,0	0/1:14,0:12:25.54:26,0,30	0/0:16,0:3:5.69:0,6,51	0/0:25,0:5:9:0,9,90	./.	1/1:23,0:19:0.09:0,0,0	0/0:35,0:30:8.42:0,8,70	0/0:76,0:41:58.98:0,59,751	1/1:49,24:69:50.92:767,51,0	0/0:82,0:68:99:0,147,1671	0/0:28,0:24:0:0,0,0	0/1:51,35:78:9.93:754,0,10	0/1:36,10:45:27.32:521,0,27	0/0:55,0:47:4.21:0,4,59	1/1:49,0:44:0.72:3,1,0	0/0:42,0:39:19.28:0,19,196	0/0:19,0:19:16.80:0,17,146	0/0:23,0:20:31.41:0,31,458	0/0:33,0:19:38.67:0,39,411	0/0:29,0:28:9:0,9,109	0/0:57,0:44:0.56:0,1,31	1/1:24,22:44:19.71:350,20,0	1/1:23,13:34:15.03:216,15,0	1/1:39,11:47:8.07:92,8,0	0/0:37,0:34:3.21:0,3,40	0/0:60,0:45:88.91:0,89,1030	0/0:23,0:22:18.78:0,19,233	0/0:7,0:6:8.95:0,9,81
chr10	47593761	.	C	CCT	542.62	PASS	AB=0.960;AC=10;AF=0.185;AN=54;BaseQRankSum=0.318;DP=1158;FS=7.075;HRun=0;HaplotypeScore=361.0881;InbreedingCoeff=-0.0221;MQ=28.33;MQ0=48;MQRankSum=3.297;QD=1.32;ReadPosRankSum=3.461;VQSLOD=0.8906;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:54,4:53:30.84:31,0,68	0/0:13,0:11:3.35:0,3,46	0/0:18,0:2:6.02:0,6,96	0/0:24,0:5:9.03:0,9,147	./.	1/1:24,0:20:0.09:0,0,0	0/0:37,0:31:14.96:0,15,185	0/0:78,0:44:84.34:0,84,1199	0/1:71,3:70:60.85:158,0,61	0/0:79,0:66:99:0,171,2553	1/1:27,0:23:0.44:1,0,0	0/1:86,0:78:99:171,0,131	0/1:44,3:46:99:241,0,100	0/0:55,0:47:4.73:0,5,89	0/0:49,0:44:2.79:0,3,9	0/0:43,0:40:19.32:0,19,289	0/0:18,0:18:21:0,21,280	0/0:23,0:20:32.97:0,33,658	0/0:35,0:19:48.11:0,48,723	0/0:28,0:27:9:0,9,147	0/0:57,0:43:1.56:0,2,50	0/1:44,1:43:0.16:0,0,35	0/0:35,1:34:2.14:0,2,26	0/1:46,3:47:7.94:52,0,8	0/0:37,0:34:3.21:0,3,49	0/0:58,0:43:99:0,118,1622	0/0:21,0:20:21.79:0,22,309	0/0:7,0:6:9.03:0,9,131
chr10	47593767	.	TATAC	T	59.72	PASS	AB=0.941;AC=6;AF=0.111;AN=54;BaseQRankSum=7.036;DP=1157;FS=5.853;HRun=0;HaplotypeScore=355.5170;InbreedingCoeff=0.0759;MQ=29.15;MQ0=56;MQRankSum=-1.084;QD=0.22;ReadPosRankSum=-5.154;VQSLOD=0.5483;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:48,7:51:42.54:43,0,180	0/0:12,0:10:2.21:0,2,65	0/0:23,0:3:9.03:0,9,189	0/0:38,0:5:15.01:0,15,297	./.	0/0:25,0:21:0.09:0,0,0	0/0:34,0:28:14.93:0,15,346	0/0:74,4:45:45.53:0,46,1311	0/1:71,3:70:4.90:5,0,892	0/0:78,0:63:99:0,156,3044	0/0:23,0:19:0.47:0,0,1	0/0:82,3:77:11.53:0,12,1182	0/1:40,3:42:90.49:90,0,688	0/0:55,0:47:4.85:0,5,99	1/1:45,0:40:1.04:3,1,0	0/0:42,0:39:17.01:0,17,329	0/0:17,0:17:19.80:0,20,440	0/0:26,0:23:31.91:0,32,857	0/0:33,0:17:3.33:0,3,852	0/0:27,0:26:9.03:0,9,234	0/0:59,0:43:2.35:0,2,36	0/0:44,3:44:26.42:0,26,411	0/0:36,2:36:18.05:0,18,260	0/1:50,0:48:20.52:21,0,40	0/0:35,0:32:2.36:0,2,73	0/0:57,0:40:94.87:0,95,1910	0/0:19,0:18:14.17:0,14,358	0/0:8,0:7:8.96:0,9,157
chr10	47593789	.	TACATACACC	T	1801.70	PASS	AB=1.000;AC=22;AF=0.393;AN=56;BaseQRankSum=1.212;DP=1182;FS=0.975;HRun=0;HaplotypeScore=327.8578;InbreedingCoeff=-0.0757;MQ=28.65;MQ0=102;MQRankSum=-6.570;QD=2.70;ReadPosRankSum=-4.165;VQSLOD=1.3723;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:48,0:43:45.35:45,0,707	1/1:10,0:8:2.60:6,3,0	0/0:68,0:6:17.54:0,18,317	0/0:87,0:8:24.08:0,24,495	0/0:25,0:22:0.14:0,0,1	0/0:25,0:21:0.05:0,0,1	0/1:30,0:23:3.85:4,0,260	0/1:84,0:45:99:549,0,325	0/1:65,0:61:3.47:3,0,1555	0/1:67,0:49:99:509,0,269	0/0:20,0:14:0:0,0,0	0/0:79,0:71:37.64:0,38,2035	0/1:43,0:41:6.88:7,0,1159	1/1:44,0:37:7.05:46,7,0	0/1:41,0:36:0.55:1,0,1	1/1:29,8:34:13.95:185,14,0	0/1:16,0:16:20.06:85,0,20	0/1:26,0:23:99:190,0,186	0/1:36,0:12:74.23:74,0,251	0/1:23,0:21:34.88:44,0,35	0/0:77,0:53:3.81:0,4,74	0/0:43,0:41:21.69:0,22,991	0/0:37,0:36:23.74:0,24,928	0/0:53,0:49:18.56:0,19,611	1/1:31,0:27:0.95:2,1,0	0/1:43,0:26:99:148,0,442	0/1:16,0:14:45.81:46,0,64	0/1:7,0:6:3.44:3,0,18
chr10	47593790	.	ACATACAC	A	3792.93	PASS	AB=0.780;AC=19;AF=0.339;AN=56;BaseQRankSum=-2.791;DP=1178;FS=5.337;HRun=0;HaplotypeScore=304.0387;InbreedingCoeff=0.0234;MQ=28.65;MQ0=103;MQRankSum=-5.643;QD=6.86;ReadPosRankSum=-4.746;VQSLOD=1.0594;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:47,0:42:19.46:19,0,617	1/1:5,5:8:0.88:2,1,0	0/0:69,0:6:17.26:0,17,316	0/0:89,0:8:24.08:0,24,479	0/0:9,16:22:0.14:0,0,1	0/1:13,11:20:0.03:0,0,0	0/0:27,3:23:18.80:0,19,324	0/1:59,26:45:99:1343,0,321	0/0:64,0:60:52.44:0,52,1531	0/1:38,26:47:99:1418,0,449	0/0:11,9:14:0:0,0,0	0/0:76,0:68:77.87:0,78,1919	0/0:41,0:39:15.62:0,16,1175	0/1:25,19:37:3.52:15,0,4	0/1:30,11:36:0.38:1,0,0	1/1:37,0:34:13.01:105,13,0	0/1:15,1:16:36.02:36,0,78	0/1:23,4:24:99:242,0,218	0/1:33,4:12:99:141,0,267	0/1:12,11:21:1.68:2,0,104	0/0:65,11:54:3.80:0,4,87	0/0:41,0:39:21.44:0,21,891	0/0:37,0:35:23.74:0,24,814	0/0:55,0:51:28.55:0,29,713	1/1:15,16:27:1.92:5,2,0	0/1:31,13:27:99:380,0,618	0/1:9,7:14:82.62:83,0,89	0/1:3,4:6:1.54:2,0,33
chr10	47593797	.	C	CA	2674.26	PASS	AB=0.803;AC=31;AF=0.554;AN=56;BaseQRankSum=3.461;DP=1154;FS=0.456;HRun=1;HaplotypeScore=258.2043;InbreedingCoeff=-0.0588;MQ=28.95;MQ0=97;MQRankSum=-4.396;QD=3.18;ReadPosRankSum=-0.678;VQSLOD=-0.7001;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:36,6:47:38.63:39,0,303	1/1:7,1:6:3.33:39,3,0	0/0:79,0:7:21.05:0,21,257	0/0:95,0:8:24.06:0,24,301	0/0:17,3:19:0.60:0,1,2	0/1:12,3:18:0.23:0,0,0	0/1:24,5:23:99:100,0,166	0/1:81,0:43:99:439,0,257	0/1:49,2:61:17.86:18,0,624	0/1:48,4:45:99:459,0,188	0/1:16,0:14:0:0,0,0	0/1:55,1:64:5.36:5,0,700	0/1:30,1:42:58.36:58,0,489	1/1:23,5:33:3.52:56,4,0	0/1:17,16:28:0.36:0,0,1	1/1:20,16:33:17.51:158,18,0	1/1:7,4:14:11.15:229,11,0	0/1:12,5:18:11.57:225,0,12	0/1:26,5:11:68.66:213,0,69	1/1:17,4:19:14.78:201,15,0	0/0:58,23:58:4.68:0,5,45	0/1:36,5:42:13.08:13,0,496	0/0:30,4:33:26.79:0,27,374	0/1:37,7:49:23.15:23,0,307	1/1:22,6:26:3.47:36,3,0	0/1:37,6:24:99:296,0,202	1/1:8,5:11:13.81:174,14,0	1/1:5,1:5:3.48:49,3,0
chr10	47593818	.	T	TAC	1067.97	PASS	AB=0.943;AC=21;AF=0.375;AN=56;BaseQRankSum=-5.508;DP=1081;FS=0.000;HRun=0;HaplotypeScore=267.4786;InbreedingCoeff=0.2506;MQ=30.29;MQ0=85;MQRankSum=2.482;QD=2.27;ReadPosRankSum=-6.819;VQSLOD=0.7261;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:55,1:51:11.35:0,11,259	1/1:6,2:8:5.95:97,6,0	0/0:39,0:4:5.97:0,6,59	0/0:53,0:4:12.04:0,12,155	1/1:23,4:24:9.03:145,9,0	0/1:22,1:18:0:0,0,0	0/0:32,0:23:5.62:0,6,70	0/0:66,0:24:12.48:0,12,282	0/0:63,0:57:57.16:0,57,709	0/1:59,2:48:91.33:91,0,822	1/1:16,6:19:5.98:96,6,0	0/0:66,0:61:50.75:0,51,638	0/0:47,0:43:57.30:0,57,609	0/1:44,1:37:35.90:41,0,36	1/1:37,2:35:5.68:67,6,0	0/0:37,0:36:13.96:0,14,162	0/1:14,1:15:4.14:4,0,168	0/1:20,0:18:12.20:12,0,217	0/1:30,1:13:49.27:49,0,229	0/0:20,3:20:15.04:0,15,168	1/1:76,4:57:15.04:216,15,0	0/0:41,0:39:43.24:0,43,541	0/0:31,0:30:29.58:0,30,391	0/0:57,0:53:35.29:0,35,430	1/1:24,3:26:4.25:94,4,0	0/1:46,1:27:99:204,0,371	0/1:14,4:17:80.46:80,0,97	0/1:6,1:6:30.37:45,0,30
chr10	47593838	.	T	TAC	2968.32	PASS	AB=0.881;AC=14;AF=0.269;AN=52;BaseQRankSum=2.405;DP=884;FS=5.784;HRun=0;HaplotypeScore=235.3162;InbreedingCoeff=0.4103;MQ=33.71;MQ0=69;MQRankSum=2.433;QD=7.46;ReadPosRankSum=3.499;VQSLOD=2.6695;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:37,16:48:63.71:257,0,64	0/0:8,0:8:6.85:0,7,59	./.	./.	0/0:24,0:20:6.88:0,7,88	0/0:20,0:18:2.52:0,3,24	0/1:32,0:24:7.47:7,0,109	0/1:52,0:11:36.48:36,0,109	0/1:36,17:47:35.62:457,0,36	0/0:48,0:36:0.58:0,1,415	0/0:20,0:19:7.70:0,8,65	1/1:35,18:49:35.71:510,36,0	1/1:28,19:42:37.49:478,37,0	0/0:34,0:31:3.90:0,4,40	0/0:32,0:30:3.14:0,3,26	0/0:39,0:38:6.38:0,6,191	0/0:14,0:14:13.87:0,14,156	0/0:23,0:21:41.04:0,41,418	0/0:27,0:11:15.02:0,15,180	0/0:18,0:15:9.03:0,9,116	0/0:72,0:55:34.67:0,35,380	1/1:18,18:33:30.05:419,30,0	1/1:12,13:23:27.09:437,27,0	1/1:26,21:45:35.42:536,35,0	0/0:25,0:23:3.24:0,3,165	0/0:37,0:24:31.44:0,31,381	0/0:18,0:18:7.44:0,7,156	0/0:9,0:8:12.01:0,12,137
chr10	47593848	.	T	TAC	2761.53	PASS	AB=0.875;AC=14;AF=0.259;AN=54;BaseQRankSum=3.104;DP=817;FS=3.111;HRun=0;HaplotypeScore=214.2893;InbreedingCoeff=0.5558;MQ=35.26;MQ0=61;MQRankSum=-0.116;QD=7.89;ReadPosRankSum=1.684;VQSLOD=3.4507;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:30,18:42:52.41:240,0,52	0/0:8,0:8:14.95:0,15,194	./.	0/0:1,0:1:0:0,0,0	0/0:24,0:21:26.84:0,27,345	0/0:19,0:17:5.42:0,5,64	0/1:34,0:26:17.06:17,0,215	0/0:48,0:11:6.70:0,7,124	0/1:33,14:42:67.02:210,0,67	0/0:47,0:36:26.10:0,26,508	0/0:15,0:14:17.42:0,17,206	1/1:28,15:41:32.79:470,33,0	1/1:30,16:42:32.69:487,33,0	0/1:32,0:30:9.32:9,0,100	0/0:34,0:30:10.91:0,11,143	0/0:37,0:37:15.29:0,15,295	0/0:15,0:15:18.96:0,19,221	0/0:29,0:26:38.85:0,39,625	0/0:20,0:9:18.06:0,18,236	0/0:15,0:12:15.05:0,15,193	0/0:78,0:60:65.98:0,66,852	1/1:20,15:32:25.39:446,25,0	1/1:12,11:21:21.05:323,21,0	1/1:22,18:39:44.16:736,44,0	0/0:20,0:18:28.33:0,28,355	0/0:35,0:21:40.95:0,41,495	0/0:13,0:13:21.06:0,21,266	0/0:7,0:7:12:0,12,159
chr10	47596400	.	G	GC	5570.19	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-13.541;DP=660;FS=0.714;HRun=5;HaplotypeScore=75.0166;InbreedingCoeff=0.9997;MQ=83.89;MQ0=0;MQRankSum=-1.297;QD=32.77;ReadPosRankSum=4.022;VQSLOD=5.3243;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,42:46:99:1500,114,0	0/0:9,0:9:27.07:0,27,290	0/0:21,0:21:37.42:0,37,489	0/0:28,0:28:55.76:0,56,667	0/0:29,0:29:84.18:0,84,884	0/0:25,0:25:69.16:0,69,733	0/0:29,0:29:81.18:0,81,855	0/0:36,0:36:96.20:0,96,1019	1/1:2,19:21:54.18:711,54,0	0/0:23,0:23:66.16:0,66,707	0/0:18,0:18:51.13:0,51,547	1/1:2,15:17:45.15:592,45,0	1/1:1,18:19:51.17:671,51,0	0/0:18,0:18:54.14:0,54,579	0/0:25,0:25:72.15:0,72,756	0/0:16,0:16:45.11:0,45,483	0/0:28,0:27:81.14:0,81,843	0/0:22,0:22:60.13:0,60,635	0/0:15,0:15:36.07:0,36,372	0/0:25,0:25:72.17:0,72,765	0/0:47,0:47:99:0,132,1389	1/1:2,20:22:47.18:598,47,0	1/1:2,18:20:51.17:671,51,0	1/1:2,23:25:63.20:828,63,0	0/0:29,0:29:72.18:0,72,773	0/0:22,0:22:66.17:0,66,707	0/0:14,0:14:39.10:0,39,419	0/0:11,0:11:33.08:0,33,355
chr10	47597411	.	G	GA	5158.85	PASS	AB=0.692;AC=49;AF=0.875;AN=56;BaseQRankSum=1.195;DP=620;FS=4.137;HRun=12;HaplotypeScore=151.3709;InbreedingCoeff=0.0864;MQ=73.78;MQ0=0;MQRankSum=-3.146;QD=8.54;ReadPosRankSum=-2.026;VQSLOD=2.2477;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:10,36:47:45.68:603,46,0	1/1:10,0:10:14.20:71,14,0	0/1:23,1:24:26.61:27,0,46	0/0:16,0:15:2.54:0,3,33	1/1:24,0:23:20.53:112,21,0	1/1:22,0:22:31.35:160,31,0	1/1:27,0:27:53.80:299,54,0	1/1:26,0:26:38.10:218,38,0	1/1:4,10:14:24.04:234,24,0	1/1:24,0:24:51.18:320,51,0	1/1:20,0:19:34.28:169,34,0	0/1:7,18:25:29.66:227,0,30	1/1:2,15:18:17.12:248,17,0	1/1:24,0:24:43.37:222,43,0	1/1:21,0:21:24.86:119,25,0	1/1:4,20:25:16.31:352,16,0	1/1:31,0:31:28.49:148,28,0	1/1:20,0:20:17.38:96,17,0	1/1:19,0:19:20.14:111,20,0	1/1:33,0:33:31.50:175,32,0	1/1:11,0:10:6.76:34,7,0	0/1:8,16:27:9.60:289,0,10	0/1:12,10:22:21.14:267,0,21	0/1:6,10:16:3.88:128,0,4	1/1:12,0:12:20.06:107,20,0	1/1:33,0:33:50.17:274,50,0	1/1:14,0:13:14.27:73,14,0	1/1:12,0:12:14.31:75,14,0
chr10	47597710	.	AT	A	5452.09	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=14.168;DP=652;FS=0.345;HRun=2;HaplotypeScore=79.3307;InbreedingCoeff=0.9999;MQ=87.02;MQ0=0;MQRankSum=-2.859;QD=36.59;ReadPosRankSum=3.200;VQSLOD=5.4484;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,36:38:99:1324,102,0	0/0:12,0:12:33.11:0,33,491	0/0:29,0:29:82.97:0,83,1173	0/0:17,0:17:48.15:0,48,675	0/0:27,0:27:81.27:0,81,1212	0/0:19,0:19:57.19:0,57,854	0/0:16,0:16:45.15:0,45,671	0/0:29,0:29:84.28:0,84,1237	1/1:0,15:15:42.14:545,42,0	0/0:30,0:30:84.24:0,84,1191	0/0:33,0:32:96.32:0,96,1425	1/1:0,17:17:48.16:623,48,0	1/1:0,16:16:45.15:584,45,0	0/0:31,0:31:93.30:0,93,1372	0/0:21,0:21:63.21:0,63,942	0/0:20,0:20:57.18:0,57,833	0/0:31,0:31:93.30:0,93,1371	0/0:28,0:28:78.26:0,78,1160	0/0:19,0:19:57.19:0,57,852	0/0:24,0:24:72.22:0,72,1039	0/0:27,0:27:78.26:0,78,1167	1/1:0,31:31:90.29:1168,90,0	1/1:0,20:20:57.19:740,57,0	1/1:0,12:12:36.12:467,36,0	0/0:20,0:20:57.19:0,57,850	0/0:26,0:26:78.26:0,78,1149	0/0:25,0:25:72.24:0,72,1078	0/0:19,0:19:57.19:0,57,848
chr10	47598307	.	TTGGAGCTCATAAA	T	14084.37	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=16.462;DP=633;FS=2.690;HRun=0;HaplotypeScore=241.4711;InbreedingCoeff=0.9967;MQ=81.36;MQ0=0;MQRankSum=-16.644;QD=83.34;ReadPosRankSum=4.038;VQSLOD=4.2567;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,38:44:96.33:3711,96,0	0/0:11,0:11:33.11:0,33,2066	0/0:23,0:23:63.19:0,63,3027	0/0:16,0:16:42.95:0,43,2065	0/0:24,0:24:69.24:0,69,4432	0/0:19,0:19:57.20:0,57,3412	0/0:22,0:22:66.23:0,66,3897	0/0:35,0:35:99:0,102,5650	1/1:3,19:22:51.18:2037,51,0	0/0:32,0:32:90.31:0,90,5320	0/0:14,0:14:39.13:0,39,2465	1/1:4,25:29:63.22:2516,63,0	1/1:2,20:22:44.99:1797,45,0	0/0:28,0:28:84.29:0,84,5386	0/0:15,0:15:45.15:0,45,2969	0/0:31,0:31:84.29:0,84,5042	0/0:34,0:34:99:0,99,6068	0/0:10,0:10:30.10:0,30,1857	0/0:26,0:26:75.24:0,75,4199	0/0:19,0:19:54.17:0,54,3251	0/0:36,0:36:99:0,99,5870	1/1:3,19:22:48.16:1917,48,0	1/1:2,10:12:27.09:955,27,0	1/1:3,15:18:30.99:1152,31,0	0/0:23,0:23:69.24:0,69,4453	0/0:20,0:20:60.21:0,60,3866	0/0:21,0:20:63.22:0,63,3876	0/0:5,0:5:15.05:0,15,978
chr10	47599552	.	T	TCTGAGA	14026.05	PASS	AB=0.963;AC=15;AF=0.268;AN=56;BaseQRankSum=9.463;DP=751;FS=1.543;HRun=0;HaplotypeScore=168.1588;InbreedingCoeff=0.9081;MQ=73.36;MQ0=0;MQRankSum=-17.873;QD=57.02;ReadPosRankSum=1.382;VQSLOD=5.2800;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:13,30:45:75.26:2648,75,0	0/0:11,0:11:33.11:0,33,758	0/0:17,0:17:45.15:0,45,1013	0/0:18,0:18:36.09:0,36,729	0/0:17,0:17:51.16:0,51,1159	0/0:19,0:19:57.20:0,57,1295	0/0:35,0:35:99:0,102,2303	0/0:20,0:20:60.21:0,60,1371	1/1:7,27:36:78.22:2605,78,0	0/0:34,0:33:99:0,99,2228	0/0:18,0:18:51.17:0,51,1150	1/1:11,21:33:78.27:2634,78,0	1/1:10,23:33:81.28:2781,81,0	0/1:25,1:26:31.25:31,0,1579	0/0:40,0:40:99:0,120,2667	0/0:27,0:27:78.25:0,78,1718	0/0:31,0:31:78.25:0,78,1721	0/0:27,0:27:75.22:0,75,1677	0/0:31,0:31:84.29:0,84,1853	0/0:28,0:28:84.29:0,84,1895	0/0:33,0:33:99:0,99,2284	1/1:9,13:25:20.84:695,21,0	1/1:6,16:24:33.11:1109,33,0	1/1:8,15:24:44.79:1522,45,0	0/0:24,0:24:63.22:0,63,1438	0/0:23,0:23:69.24:0,69,1632	0/0:36,0:36:99:0,108,2514	0/0:16,0:16:39.13:0,39,922
chr10	47601760	.	A	AG	7025.03	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=16.398;DP=610;FS=11.134;HRun=1;HaplotypeScore=75.6328;InbreedingCoeff=0.9467;MQ=83.00;MQ0=0;MQRankSum=-3.243;QD=41.32;ReadPosRankSum=3.143;VQSLOD=4.8074;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,46:47:99:1998,135,0	0/0:10,0:10:27.04:0,27,332	0/0:14,0:15:16.85:0,17,448	0/0:22,0:22:59.83:0,60,687	0/0:19,0:19:54.17:0,54,701	0/0:21,0:21:60.19:0,60,779	0/0:24,0:24:69.21:0,69,882	0/0:20,0:20:54.16:0,54,687	1/1:0,19:19:54.18:809,54,0	0/0:19,0:19:57.19:0,57,740	0/0:5,0:5:15.05:0,15,195	1/1:1,33:34:93.31:1386,93,0	1/1:1,21:22:60.20:898,60,0	0/0:15,0:15:45.13:0,45,570	0/0:21,0:21:57.19:0,57,740	0/0:16,1:17:0.16:0,0,486	0/0:46,0:46:99:0,138,1775	0/0:34,0:34:90.28:0,90,1152	0/0:20,0:20:60.19:0,60,767	0/0:16,0:16:48.16:0,48,623	0/0:44,0:44:99:0,126,1622	1/1:1,14:15:39.13:584,39,0	1/1:0,13:13:36.12:539,36,0	1/1:0,20:20:54.18:809,54,0	0/0:21,0:21:63.20:0,63,818	0/0:29,0:29:84.25:0,84,1064	0/0:17,0:17:51.15:0,51,647	0/0:5,0:5:15.05:0,15,195
chr10	47602815	.	TGGCTTTAATATCGGA	T	10545.25	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=14.456;DP=617;FS=3.874;HRun=0;HaplotypeScore=257.3976;InbreedingCoeff=0.9863;MQ=76.16;MQ0=0;MQRankSum=-14.481;QD=65.91;ReadPosRankSum=2.617;VQSLOD=4.2721;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,24:33:18.06:651,18,0	0/0:11,0:11:33.11:0,33,2293	0/0:14,0:14:42.14:0,42,2602	0/0:14,0:14:39.13:0,39,2302	0/0:26,0:26:78.27:0,78,5090	0/0:23,0:23:66.23:0,66,4351	0/0:27,0:27:81.26:0,81,5213	0/0:24,0:24:69.24:0,69,4642	1/1:5,22:27:69.24:2847,69,0	0/0:19,0:19:54.19:0,54,3396	0/0:19,0:19:57.20:0,57,3735	1/1:4,23:27:57.20:2349,57,0	1/1:4,22:26:60.21:2648,60,0	0/0:12,0:12:33.11:0,33,2151	0/0:31,0:31:87.28:0,87,6045	0/0:28,0:28:84.29:0,84,5896	0/0:31,0:31:84.29:0,84,5193	0/0:20,0:20:45.15:0,45,3051	0/0:27,0:27:75.24:0,75,4198	0/0:28,0:28:75.26:0,75,5051	0/0:23,0:23:69.22:0,69,4071	1/1:11,12:23:29.97:990,30,0	1/1:4,9:13:17.71:662,18,0	1/1:3,8:11:9.24:399,9,0	0/0:21,0:21:60.21:0,60,4097	0/0:27,0:27:78.26:0,78,4831	0/0:23,0:23:63.22:0,63,4093	0/0:9,0:9:27.09:0,27,1985
chr10	47603072	.	CG	C	1472.72	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=1.168;DP=531;FS=9.498;HRun=1;HaplotypeScore=62.2626;InbreedingCoeff=0.9632;MQ=93.49;MQ0=0;MQRankSum=-4.148;QD=17.96;ReadPosRankSum=-6.246;VQSLOD=1.3411;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,3:18:41.91:352,42,0	0/0:7,0:7:20.28:0,20,232	0/0:22,0:22:62.18:0,62,746	0/0:28,0:28:64.89:0,65,716	0/0:17,0:17:51.10:0,51,622	0/0:28,0:28:80.88:0,81,978	0/0:27,0:27:77.87:0,78,921	0/0:11,0:11:28.46:0,28,159	1/1:11,0:11:26.98:230,27,0	0/0:19,0:19:53.97:0,54,621	0/0:14,0:14:42.11:0,42,525	1/1:7,2:9:26.96:234,27,0	1/1:3,4:7:17.96:152,18,0	0/0:18,0:18:43.26:0,43,236	0/0:24,0:24:69.16:0,69,882	0/0:23,0:23:69.12:0,69,868	0/0:35,0:35:99:0,105,1245	0/0:19,0:19:57.19:0,57,752	0/0:19,0:19:54.05:0,54,627	0/0:25,0:25:69.19:0,69,874	0/0:37,0:37:99:0,111,1356	1/1:0,11:11:17.91:143,18,0	1/1:0,4:4:3.01:30,3,0	1/1:12,10:22:57:524,57,0	0/0:19,0:19:54.14:0,54,682	0/0:25,0:25:62.66:0,63,852	0/0:15,0:15:41.85:0,42,512	0/0:17,0:17:51.06:0,51,630
chr10	47603073	.	G	GC	639.37	PASS	AB=1.000;AC=6;AF=0.107;AN=56;BaseQRankSum=-0.972;DP=542;FS=4.845;HRun=8;HaplotypeScore=72.9747;InbreedingCoeff=0.6166;MQ=92.87;MQ0=0;MQRankSum=-0.198;QD=9.84;ReadPosRankSum=-2.586;VQSLOD=1.7291;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:0.70:0,1,3	0/0:7,0:7:18.01:0,18,164	0/0:22,0:22:39.04:0,39,425	0/0:28,0:28:26.73:0,27,375	0/0:17,0:17:48.01:0,48,434	0/0:28,0:28:75.03:0,75,686	0/0:27,0:27:63:0,63,571	1/1:4,8:12:24.04:263,24,0	0/1:10,0:10:0:0,0,0	0/0:19,0:19:45:0,45,408	0/0:13,0:13:36.01:0,36,325	0/0:9,0:9:3.26:0,3,10	0/0:8,0:8:4.74:0,5,13	1/1:2,18:20:39.12:450,39,0	0/0:24,0:24:66.03:0,66,604	0/0:24,0:24:69.03:0,69,630	0/0:35,0:35:93.04:0,93,850	0/0:19,0:19:57.03:0,57,522	0/0:20,0:20:47.98:0,48,429	0/0:26,0:26:66.01:0,66,598	0/0:37,0:37:99:0,99,905	0/0:13,0:13:6.89:0,7,19	0/0:5,0:5:1.77:0,2,5	0/1:23,0:23:16.36:53,0,16	0/0:19,0:19:51.01:0,51,460	0/0:23,0:24:62.05:0,62,552	0/0:16,0:16:42:0,42,381	0/0:18,0:18:44.99:0,45,406
chr10	47603079	.	CCCA	C	1036.81	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=5.569;DP=550;FS=5.870;HRun=0;HaplotypeScore=86.4878;InbreedingCoeff=0.9324;MQ=96.13;MQ0=0;MQRankSum=-4.431;QD=13.82;ReadPosRankSum=-4.192;VQSLOD=1.9164;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:16,1:17:12.51:127,13,0	0/0:7,0:7:18.06:0,18,426	0/0:27,0:27:80.02:0,80,1438	0/0:30,0:30:83.70:0,84,1530	0/0:19,0:19:57.17:0,57,1239	0/0:26,0:26:78.27:0,78,1845	0/0:28,0:28:81.18:0,81,1659	0/0:16,0:16:45.01:0,45,618	1/1:3,0:3:5.80:45,6,0	0/0:18,0:18:54.18:0,54,1219	0/0:13,0:13:39.12:0,39,875	1/1:7,0:7:8.67:122,9,0	1/1:11,0:11:10.59:202,11,0	0/0:20,0:20:45.10:0,45,691	0/0:24,0:24:72.23:0,72,1658	0/0:24,0:24:72.25:0,72,1704	0/0:35,0:35:99:0,105,2362	0/0:21,0:21:63.18:0,63,1410	0/0:21,0:21:63.17:0,63,1349	0/0:27,0:27:75.24:0,75,1692	0/0:40,0:40:99:0,120,2633	1/1:9,3:12:11.17:205,11,0	1/1:5,0:5:7.89:88,8,0	1/1:17,3:20:37.50:431,38,0	0/0:21,0:21:63.17:0,63,1299	0/0:25,0:25:75.23:0,75,1616	0/0:16,0:16:48.16:0,48,1105	0/0:17,0:17:51.17:0,51,1152
chr10	47603080	.	CCA	C	882.41	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=6.216;DP=549;FS=2.642;HRun=0;HaplotypeScore=75.2861;InbreedingCoeff=0.9525;MQ=96.78;MQ0=0;MQRankSum=-2.885;QD=14.01;ReadPosRankSum=-4.465;VQSLOD=2.7067;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:14:17.64:151,18,0	0/0:6,0:6:18.06:0,18,341	0/0:28,0:28:56.21:0,56,1090	0/0:30,0:30:60.17:0,60,1161	0/0:19,0:19:57.17:0,57,1016	0/0:26,0:26:78.27:0,78,1493	0/0:27,0:27:78.21:0,78,1349	0/0:19,0:19:54.02:0,54,591	1/1:2,0:2:5.96:45,6,0	0/0:20,0:20:60.19:0,60,1063	0/0:13,0:13:39.12:0,39,697	1/1:3,2:5:14.90:111,15,0	1/1:6,4:10:22.20:200,22,0	0/0:22,0:22:48.11:0,48,539	0/0:25,0:25:75.23:0,75,1373	0/0:24,0:24:72.25:0,72,1380	0/0:34,0:34:99:0,102,1887	0/0:22,0:22:66.17:0,66,1167	0/0:21,0:21:63.17:0,63,1108	0/0:27,0:27:78.24:0,78,1403	0/0:39,0:39:99:0,117,2072	1/1:8,3:11:9.99:135,10,0	1/1:3,1:4:8.48:74,8,0	1/1:11,6:17:38.91:355,39,0	0/0:21,0:21:63.17:0,63,1068	0/0:29,0:29:87.13:0,87,1407	0/0:16,0:16:48.16:0,48,906	0/0:18,0:18:54.15:0,54,940
chr10	47603081	.	CA	C	912.08	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=5.201;DP=583;FS=3.277;HRun=1;HaplotypeScore=76.2711;InbreedingCoeff=0.9648;MQ=93.86;MQ0=0;MQRankSum=-1.437;QD=9.70;ReadPosRankSum=-4.640;VQSLOD=-0.4330;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:21,1:23:26.78:197,27,0	0/0:7,0:7:21.03:0,21,276	0/0:28,0:28:56.68:0,57,827	0/0:27,1:28:54.10:0,54,840	0/0:19,0:19:57.13:0,57,755	0/0:26,0:26:78.25:0,78,1118	0/0:28,0:28:84.09:0,84,1063	0/0:19,0:19:53.92:0,54,483	1/1:5,0:5:5.96:45,6,0	0/0:20,0:20:60.19:0,60,832	0/0:13,0:13:39.11:0,39,517	1/1:9,0:9:14.85:103,15,0	1/1:14,0:14:26.87:214,27,0	0/0:21,0:21:47.70:0,48,358	0/0:26,0:26:78.21:0,78,1064	0/0:24,0:24:72.23:0,72,1033	0/0:36,0:36:99:0,108,1454	0/0:24,0:24:69.13:0,69,906	0/0:21,0:21:63.14:0,63,830	0/0:27,0:27:78.22:0,78,1069	0/0:39,0:39:99:0,111,1525	1/1:12,1:13:23.45:151,23,0	1/1:9,0:9:8.96:71,9,0	1/1:20,1:21:38.85:322,39,0	0/0:21,0:21:63.15:0,63,820	0/0:29,0:29:80.73:0,81,1070	0/0:16,0:16:48.16:0,48,695	0/0:17,0:17:51.13:0,51,687
chr10	47605348	.	GGACTGAA	G	2945.99	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=9.621;DP=379;FS=12.829;HRun=0;HaplotypeScore=89.1690;InbreedingCoeff=0.8726;MQ=68.40;MQ0=0;MQRankSum=-10.358;QD=37.29;ReadPosRankSum=1.363;VQSLOD=2.6857;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,16:21:39.13:950,39,0	0/0:3,0:3:3.01:0,3,115	0/0:15,0:15:33.11:0,33,1097	0/0:7,0:6:9.03:0,9,335	0/0:7,0:7:21.07:0,21,764	0/0:14,0:14:36.12:0,36,1382	0/0:30,0:30:78.27:0,78,2906	0/0:21,0:21:51.16:0,51,1848	1/1:4,5:9:12.04:292,12,0	0/0:16,0:15:36.11:0,36,1221	0/0:2,0:2:3.01:0,3,115	1/1:4,9:13:27.09:658,27,0	1/1:1,7:8:18.06:438,18,0	0/0:17,0:17:45.15:0,45,1642	0/0:14,0:14:42.14:0,42,1607	1/1:3,3:6:6.02:146,6,0	0/0:31,0:31:93.32:0,93,3516	0/0:29,0:29:75.26:0,75,2777	0/0:14,0:14:33.11:0,33,1106	0/0:11,0:11:30.10:0,30,1140	0/0:26,0:26:75.12:0,75,2778	1/1:2,4:6:9.03:219,9,0	1/1:4,1:5:6.02:142,6,0	1/1:4,7:11:12.03:292,12,0	0/0:14,0:14:39.13:0,39,1489	0/0:15,0:15:39.13:0,39,1410	0/0:7,0:7:18.06:0,18,690	0/0:6,0:6:18.06:0,18,680
chr10	47606862	.	TACAC	T	1356.42	PASS	AB=0.767;AC=18;AF=0.391;AN=46;BaseQRankSum=-2.499;DP=291;FS=3.380;HRun=0;HaplotypeScore=67.6794;InbreedingCoeff=0.6111;MQ=32.85;MQ0=3;MQRankSum=-0.687;QD=13.30;ReadPosRankSum=0.591;VQSLOD=3.0504;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:17:7.08:0,7,50	1/1:5,0:5:2.68:11,3,0	./.	./.	0/0:4,1:8:5.11:0,5,24	1/1:3,5:8:15.05:227,15,0	1/1:6,5:13:3.95:49,4,0	0/0:10,0:10:15.05:0,15,213	0/0:8,0:8:3.01:0,3,72	0/0:9,0:14:22.76:0,23,125	0/0:1,0:3:2.74:0,3,12	0/0:8,0:16:14.81:0,15,260	0/0:10,0:14:6.02:0,6,124	0/0:7,0:10:5.05:0,5,42	1/1:4,4:12:13.80:144,14,0	1/1:1,10:12:33.09:495,33,0	0/0:9,0:18:13.72:0,14,61	0/0:4,0:10:16.47:0,16,73	1/1:5,8:13:24.04:375,24,0	./.	1/1:8,3:11:3.01:48,3,0	./.	0/1:7,0:10:0:0,0,0	0/0:9,0:14:9.03:0,9,161	0/1:4,2:10:26.30:36,0,26	0/0:11,0:11:9.97:0,10,75	1/1:5,3:8:8.90:133,9,0	./.
chr10	47608352	.	T	TGAGCCTGCGTTATCTAA	27282.82	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-1.103;DP=660;FS=9.328;HRun=0;HaplotypeScore=279.0704;InbreedingCoeff=0.9932;MQ=82.96;MQ0=0;MQRankSum=-17.525;QD=165.35;ReadPosRankSum=0.047;VQSLOD=3.3727;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,11:33:72.25:4767,72,0	0/0:8,0:8:11.24:0,11,511	0/0:26,0:24:66.20:0,66,2443	0/0:30,0:31:74.85:0,75,2576	0/0:19,0:19:54.19:0,54,2684	0/0:23,0:23:69.24:0,69,3296	0/0:20,0:20:60.21:0,60,2652	0/0:28,0:28:78.27:0,78,3303	1/1:10,13:24:72.25:4950,72,0	0/0:30,0:30:90.31:0,90,4056	0/0:23,0:23:57.17:0,57,2475	1/1:13,11:24:69.24:4632,69,0	1/1:12,7:22:60.17:3596,60,0	0/0:15,0:15:45.14:0,45,1879	0/0:27,0:27:78.25:0,78,3452	0/0:23,0:23:63.22:0,63,2630	0/0:24,0:24:69.20:0,69,2882	0/0:31,0:31:93.26:0,93,3916	0/0:25,0:25:69.23:0,69,3246	0/0:23,0:23:54.14:0,54,2295	0/0:26,0:26:75.26:0,75,3510	1/1:13,15:30:72.25:5283,72,0	1/1:5,8:14:36.12:2390,36,0	1/1:12,2:17:30.10:1664,30,0	0/0:17,0:17:48.16:0,48,2335	0/0:31,0:31:93.32:0,93,4167	0/0:34,0:34:99:0,102,4074	0/0:11,0:11:30.10:0,30,1508
chr10	47608827	.	C	CGCGT	3604.73	PASS	AB=0.564;AC=13;AF=0.232;AN=56;BaseQRankSum=-0.986;DP=592;FS=7.418;HRun=0;HaplotypeScore=145.6942;InbreedingCoeff=0.8764;MQ=54.84;MQ0=4;MQRankSum=-1.324;QD=26.90;ReadPosRankSum=2.782;VQSLOD=3.3669;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,13:25:23.78:437,24,0	0/0:7,0:7:18.06:0,18,307	0/0:26,0:13:22.89:0,23,341	0/0:24,0:12:11.07:0,11,157	0/0:20,0:20:47.81:0,48,723	0/0:20,0:20:33.11:0,33,550	0/0:20,0:20:47.53:0,48,765	0/0:31,0:30:63.15:0,63,917	0/1:5,16:22:24.10:565,0,24	0/0:24,0:24:54.06:0,54,849	0/0:18,0:18:47.93:0,48,672	1/1:9,13:22:42.13:1017,42,0	1/1:6,7:13:24.04:517,24,0	0/0:24,0:24:51.14:0,51,816	0/0:27,0:27:75.21:0,75,1195	0/0:16,0:16:36:0,36,561	0/0:32,0:32:66.16:0,66,1065	0/0:23,0:23:44.90:0,45,667	0/0:21,0:18:36.07:0,36,511	0/0:10,0:10:26.91:0,27,460	0/0:48,0:48:98.11:0,98,1615	1/1:6,15:21:13.80:373,14,0	1/1:5,12:16:11.39:299,11,0	1/1:6,8:14:18.03:397,18,0	0/0:16,0:16:36.12:0,36,614	0/0:24,0:24:54.16:0,54,844	0/0:18,0:18:39.10:0,39,595	0/0:8,0:8:21.02:0,21,299
chr10	47608866	.	T	TTG	2785.59	PASS	AB=0.805;AC=20;AF=0.357;AN=56;BaseQRankSum=-6.530;DP=693;FS=3.488;HRun=0;HaplotypeScore=164.6503;InbreedingCoeff=0.1257;MQ=51.39;MQ0=22;MQRankSum=2.559;QD=8.12;ReadPosRankSum=1.557;VQSLOD=3.6172;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:25:0.11:1,0,0	0/0:11,0:11:17.88:0,18,179	0/0:22,0:9:2.98:0,3,21	0/0:42,0:11:8.84:0,9,74	0/1:14,10:24:80.59:245,0,81	0/0:19,0:19:20.71:0,21,173	0/0:38,0:39:75.04:0,75,836	0/0:36,0:36:15.04:0,15,171	0/1:23,0:30:0.60:1,0,3	0/1:14,16:31:46.45:605,0,46	1/1:3,5:7:9.03:139,9,0	1/1:19,0:21:4.49:25,4,0	0/1:18,0:20:16.13:16,0,45	0/0:22,0:22:38.82:0,39,394	0/0:24,0:26:31.69:0,32,427	0/1:8,5:13:56.61:81,0,57	0/1:19,21:42:99:623,0,216	0/1:16,17:35:76.95:548,0,77	0/0:19,0:15:15.03:0,15,156	0/0:10,0:12:20.53:0,21,189	0/0:65,0:80:99:0,131,1344	0/1:12,0:16:0.83:1,0,1	1/1:10,0:10:1.71:11,2,0	0/1:16,0:18:0.08:0,0,0	0/1:6,11:17:13.25:257,0,13	0/1:12,11:26:29.60:339,0,30	0/0:15,0:14:24.01:0,24,248	1/1:0,2:3:3.01:46,3,0
chr10	47608908	.	GTC	G	273.52	PASS	AB=0.901;AC=10;AF=0.179;AN=56;BaseQRankSum=9.383;DP=684;FS=17.183;HRun=0;HaplotypeScore=149.9132;InbreedingCoeff=0.6739;MQ=48.51;MQ0=34;MQRankSum=-6.799;QD=2.28;ReadPosRankSum=-0.612;VQSLOD=1.7803;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:20,3:20:0.15:0,0,6	0/0:9,0:9:24.07:0,24,429	0/0:22,0:6:17.74:0,18,178	0/0:34,1:8:18.02:0,18,240	0/0:19,0:19:42:0,42,619	0/0:17,0:16:33.04:0,33,468	0/0:47,0:46:99:0,113,1797	0/0:29,0:26:78.13:0,78,1239	1/1:22,5:27:21.38:213,21,0	0/0:24,0:23:60.09:0,60,955	0/0:11,0:10:20.47:0,20,234	1/1:23,2:24:1.05:41,1,0	1/1:14,6:18:1.81:109,2,0	0/0:27,0:27:74.13:0,74,1225	0/0:23,0:22:63.12:0,63,1032	0/0:11,0:11:33.09:0,33,570	0/0:43,0:43:99:0,115,2025	0/0:37,0:37:91.86:0,92,1537	0/0:18,0:18:33.79:0,34,723	0/0:14,0:13:35.65:0,36,542	0/0:93,0:90:99:0,170,3178	0/1:10,1:11:1.37:7,0,1	1/1:12,2:12:6.63:37,7,0	0/0:21,2:23:5.20:0,5,16	0/0:19,0:19:23.94:0,24,564	0/0:26,0:25:42.69:0,43,1107	0/0:15,0:14:35.08:0,35,601	0/0:2,0:2:2.92:0,3,17
chr10	47608910	.	CTG	C	399.11	PASS	AB=0.807;AC=7;AF=0.130;AN=54;BaseQRankSum=8.281;DP=686;FS=21.814;HRun=0;HaplotypeScore=145.1424;InbreedingCoeff=0.5989;MQ=48.51;MQ0=34;MQRankSum=-6.969;QD=3.80;ReadPosRankSum=-0.649;VQSLOD=1.3324;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:19,3:20:0.15:0,0,6	0/0:8,0:8:24.08:0,24,411	0/0:24,0:6:18.06:0,18,265	0/0:37,0:9:21.07:0,21,325	0/0:19,0:19:36.12:0,36,569	0/0:19,0:18:35.86:0,36,553	0/0:49,0:48:99:0,108,1752	0/0:31,0:28:78.24:0,78,1269	1/1:20,7:27:29.47:351,29,0	0/0:23,0:22:51.16:0,51,829	0/0:10,0:9:17.92:0,18,286	0/1:22,2:23:9.43:45,0,9	1/1:17,3:18:9.89:125,10,0	0/0:27,0:27:72.16:0,72,1161	0/0:23,0:22:63.14:0,63,950	0/0:11,0:11:27.09:0,27,468	0/0:43,0:43:99:0,108,1927	0/0:35,0:35:87.26:0,87,1429	0/0:18,0:18:49.94:0,50,758	0/0:14,0:13:30.10:0,30,509	0/0:91,0:88:99:0,181,3007	0/1:5,6:11:0.30:0,0,3	0/0:12,1:11:1.55:0,2,21	0/0:20,4:24:5.50:0,6,16	0/0:18,0:18:36.11:0,36,578	0/0:26,0:25:66.09:0,66,1027	0/0:16,0:15:33.11:0,33,562	./.
chr10	47608914	.	G	GTGTC	1396.95	PASS	AB=0.585;AC=11;AF=0.204;AN=54;BaseQRankSum=8.844;DP=692;FS=23.541;HRun=0;HaplotypeScore=160.0354;InbreedingCoeff=0.8855;MQ=48.67;MQ0=32;MQRankSum=-7.075;QD=11.45;ReadPosRankSum=-1.252;VQSLOD=1.6338;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:13,12:23:1.07:0,1,4	0/0:8,0:8:24.08:0,24,455	0/0:25,0:8:21.04:0,21,322	0/0:36,0:8:20.56:0,21,343	0/0:18,0:18:36.12:0,36,641	0/0:18,0:17:36.05:0,36,631	0/0:45,0:44:99:0,114,1918	0/0:36,0:33:90.25:0,90,1471	1/1:23,3:26:36.23:477,36,0	0/0:20,0:19:51.16:0,51,894	0/0:10,0:9:18.06:0,18,312	1/1:9,14:23:16.76:323,17,0	1/1:15,4:17:28.99:433,29,0	0/0:26,0:26:72.23:0,72,1317	0/0:22,0:21:63.14:0,63,1026	0/0:10,0:10:27.09:0,27,512	0/0:42,0:42:99:0,107,2077	0/0:36,0:36:87.26:0,87,1570	0/0:21,0:20:58.95:0,59,908	0/0:13,0:12:30.10:0,30,562	0/0:93,0:89:99:0,201,3491	1/1:9,1:10:5.67:105,6,0	1/1:9,3:11:11.88:222,12,0	0/1:9,21:31:0.21:0,0,0	0/0:20,0:20:36.11:0,36,642	0/0:26,0:26:66.09:0,66,1105	0/0:16,0:15:36.11:0,36,636	./.
chr10	47609748	.	C	CG	7395.87	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-14.558;DP=650;FS=0.671;HRun=4;HaplotypeScore=61.9790;InbreedingCoeff=0.9982;MQ=75.55;MQ0=0;MQRankSum=0.519;QD=36.61;ReadPosRankSum=2.489;VQSLOD=5.0424;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,39:42:99:1584,117,0	0/0:9,0:9:27.06:0,27,297	0/0:9,0:9:18.02:0,18,186	0/0:14,0:14:32.97:0,33,336	0/0:22,0:22:63.18:0,63,713	0/0:17,0:17:51.13:0,51,569	0/0:25,0:25:72.21:0,72,816	0/0:37,0:37:93.26:0,93,1054	1/1:2,17:19:42.14:572,42,0	0/0:28,0:28:78.21:0,78,878	0/0:16,0:16:42.05:0,42,476	1/1:1,32:33:90.30:1231,90,0	1/1:2,12:14:36.12:489,36,0	0/0:28,0:28:81.20:0,81,897	0/0:17,0:17:48.14:0,48,544	0/0:21,0:21:51.14:0,51,578	0/0:43,0:43:99:0,123,1382	0/0:17,0:17:48.14:0,48,544	0/0:23,0:23:48.12:0,48,535	0/0:20,0:20:50.65:0,51,568	0/0:26,0:26:69.18:0,69,772	1/1:0,29:29:81.27:1103,81,0	1/1:2,24:26:65.96:900,66,0	1/1:1,38:39:99:1518,111,0	0/0:12,0:12:36.09:0,36,399	0/0:24,0:24:63.18:0,63,714	0/0:27,0:27:78.21:0,78,874	0/0:13,0:13:36.10:0,36,408
chr10	47610654	.	T	TTGG	590.29	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=1.640;DP=637;FS=1.108;HRun=0;HaplotypeScore=142.8072;InbreedingCoeff=0.8996;MQ=58.74;MQ0=8;MQRankSum=-2.924;QD=28.11;ReadPosRankSum=-0.068;VQSLOD=3.9068;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:60.17:0,60,807	0/0:8,0:8:12.04:0,12,169	0/0:34,0:16:18.04:0,18,230	0/0:27,0:15:17:0,17,253	0/0:21,0:21:44.33:0,44,561	0/0:17,0:17:24.08:0,24,337	0/0:38,0:38:54.11:0,54,721	0/0:30,0:30:54.10:0,54,650	0/0:21,0:21:42.10:0,42,567	0/0:31,0:31:51.17:0,51,716	0/0:24,0:24:45.01:0,45,574	0/0:21,0:21:42.14:0,42,588	0/0:16,0:16:33.11:0,33,460	0/0:20,0:20:48.08:0,48,604	0/0:17,0:17:30.10:0,30,423	1/1:11,10:20:36.10:685,36,0	0/0:26,0:26:62.93:0,63,859	0/0:17,0:17:41.94:0,42,488	0/0:27,0:24:33.10:0,33,461	0/0:14,0:14:33.11:0,33,465	0/0:34,0:33:48.14:0,48,642	0/0:23,0:22:45.15:0,45,628	0/0:17,0:17:36.03:0,36,462	0/0:24,0:24:39.04:0,39,520	0/0:14,0:14:30.10:0,30,423	0/0:29,0:29:54.17:0,54,743	0/0:22,0:22:45.12:0,45,614	0/0:8,0:8:9.03:0,9,127
chr10	47610683	.	GT	G	2567.87	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=12.110;DP=581;FS=18.613;HRun=10;HaplotypeScore=101.7054;InbreedingCoeff=0.9831;MQ=56.55;MQ0=11;MQRankSum=-10.371;QD=17.23;ReadPosRankSum=-0.478;VQSLOD=2.5918;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:9,15:24:31.19:393,31,0	0/0:6,0:6:11.98:0,12,110	0/0:30,1:11:27.07:0,27,291	0/0:29,0:18:28.20:0,28,298	0/0:18,1:19:25.08:0,25,492	0/0:12,0:13:27.03:0,27,285	0/0:25,0:25:66.18:0,66,730	0/0:31,1:32:46.14:0,46,737	1/1:5,9:14:32.90:273,33,0	0/0:27,0:27:54.13:0,54,585	0/0:22,0:22:48.13:0,48,528	1/1:2,14:16:44.99:390,45,0	1/1:4,15:19:44.97:390,45,0	0/0:29,0:29:63.13:0,63,675	0/0:22,0:22:54.15:0,54,597	1/1:5,14:18:41.96:360,42,0	0/0:33,0:33:75.15:0,75,801	0/0:17,0:17:45.10:0,45,488	0/0:24,0:21:56.94:0,57,591	0/0:15,0:17:43.15:0,43,435	0/0:23,0:22:48.11:0,48,513	1/1:5,15:20:41.97:363,42,0	1/1:2,15:17:35.98:312,36,0	1/1:6,14:20:35.76:294,36,0	0/0:15,0:15:33.08:0,33,358	0/0:24,0:24:66.15:0,66,717	0/0:18,1:19:18.92:0,19,419	0/0:4,0:3:9.02:0,9,100
chr10	47610701	.	AT	A	1917.16	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=11.854;DP=535;FS=23.331;HRun=4;HaplotypeScore=92.4383;InbreedingCoeff=0.9638;MQ=54.61;MQ0=3;MQRankSum=-7.874;QD=15.98;ReadPosRankSum=2.542;VQSLOD=2.3033;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,16:18:27.08:320,27,0	0/0:5,0:5:5.71:0,6,83	0/0:17,0:9:21.05:0,21,276	0/0:17,0:15:26.91:0,27,416	0/0:19,0:19:48.13:0,48,625	0/0:12,0:12:30.10:0,30,418	0/0:32,0:31:78.17:0,78,1026	0/0:34,0:32:75.21:0,75,1007	1/1:2,13:14:24.07:287,24,0	0/0:21,0:21:57.19:0,57,790	0/0:18,0:18:54.14:0,54,732	1/1:2,17:17:30.09:359,30,0	1/1:2,15:17:39.12:467,39,0	0/0:26,0:26:66.21:0,66,906	0/0:22,0:22:63.17:0,63,860	0/0:18,0:18:45.14:0,45,607	0/0:29,0:29:72.24:0,72,1001	0/0:19,0:19:48.13:0,48,648	0/0:23,0:22:57.14:0,57,759	0/0:15,0:15:39.13:0,39,545	0/0:19,0:18:48.14:0,48,653	1/1:1,22:23:30.09:357,30,0	1/1:3,8:11:15.04:179,15,0	1/1:2,15:17:11.70:143,12,0	0/0:14,0:14:36.11:0,36,487	0/0:27,0:27:66.21:0,66,907	0/0:19,0:19:51.16:0,51,693	0/0:7,0:5:12.04:0,12,168
chr10	47610876	.	CTTTTTTCTTTTTTT	C	1867.22	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=5.741;DP=501;FS=8.434;HRun=0;HaplotypeScore=167.3954;InbreedingCoeff=0.7260;MQ=53.50;MQ0=16;MQRankSum=-4.663;QD=14.94;ReadPosRankSum=2.735;VQSLOD=1.6155;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:7,18:24:20.99:663,21,0	0/0:11,0:10:21.06:0,21,710	0/0:22,0:12:8.14:0,8,455	0/0:20,0:5:7.24:0,7,189	0/0:22,0:20:48.99:0,49,1709	0/0:18,0:18:42.08:0,42,1659	0/0:12,0:12:21.02:0,21,641	0/0:25,0:23:42.08:0,42,978	1/1:2,10:8:2.87:118,3,0	0/0:19,0:18:39.12:0,39,1277	0/0:20,0:20:44.79:0,45,1267	1/1:1,12:10:6.02:237,6,0	1/1:1,9:10:2.50:118,2,0	0/0:24,0:22:51.15:0,51,1820	0/0:18,0:17:24.21:0,24,864	0/1:10,0:10:30.37:30,0,472	0/0:31,0:29:66.04:0,66,2107	0/0:19,0:17:33.09:0,33,1185	0/0:16,0:16:39.10:0,39,1392	0/0:22,0:21:45.10:0,45,1301	0/0:8,0:8:11.99:0,12,268	1/1:5,15:21:14.95:323,15,0	1/1:4,14:17:12.14:426,12,0	1/1:4,8:11:5.05:125,5,0	0/0:17,0:16:45.13:0,45,1841	0/0:25,0:24:69.24:0,69,2276	0/0:22,0:21:57.11:0,57,1997	0/0:5,0:5:2.99:0,3,152
chr10	47611656	.	G	GC	3636.17	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=12.418;DP=520;FS=11.905;HRun=1;HaplotypeScore=117.7164;InbreedingCoeff=0.9777;MQ=67.08;MQ0=0;MQRankSum=2.518;QD=19.76;ReadPosRankSum=6.083;VQSLOD=2.6973;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,37:49:99:1168,110,0	0/0:7,0:7:21.07:0,21,271	0/0:25,0:22:22.49:0,22,540	0/0:24,0:20:29.62:0,30,384	0/0:24,0:24:50.80:0,51,632	0/0:19,0:19:42.30:0,42,539	0/0:15,0:15:42.13:0,42,532	0/0:15,0:15:36.11:0,36,455	1/1:7,18:25:39.13:401,39,0	0/0:21,0:21:63.19:0,63,803	0/0:14,0:14:23.48:0,23,404	1/1:6,12:18:32.21:344,32,0	1/1:4,21:25:19.79:368,20,0	0/0:15,0:15:40:0,40,490	0/0:20,0:20:54.11:0,54,663	0/0:19,0:19:40.07:0,40,176	0/0:16,0:16:44.47:0,44,522	0/0:13,0:13:33.09:0,33,411	0/0:15,0:15:42.13:0,42,523	0/0:21,0:21:51.15:0,51,642	0/0:9,0:9:26.12:0,26,317	1/1:2,23:25:51.32:578,51,0	1/1:4,17:21:29.03:319,29,0	1/1:1,20:21:41.28:458,41,0	0/0:14,0:14:32.95:0,33,413	0/0:17,0:17:49.14:0,49,598	0/0:11,0:11:30.10:0,30,389	0/0:2,0:2:6.02:0,6,77
chr10	47611675	.	A	AG	181.80	PASS	AB=0.670;AC=2;AF=0.036;AN=56;BaseQRankSum=0.039;DP=658;FS=13.450;HRun=0;HaplotypeScore=145.1866;InbreedingCoeff=-0.0454;MQ=58.89;MQ0=1;MQRankSum=1.906;QD=3.95;ReadPosRankSum=-3.729;VQSLOD=1.9644;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,147,1870	0/0:11,0:11:32.89:0,33,312	0/0:18,0:14:30.94:0,31,293	0/0:19,0:15:1.10:0,1,225	0/0:43,0:42:99:0,109,835	0/0:29,0:29:80.84:0,81,848	0/0:22,0:22:56.56:0,57,581	0/1:14,15:28:99:253,0,391	0/0:22,0:22:60.13:0,60,732	0/0:30,0:29:84.03:0,84,846	0/0:30,0:30:80.30:0,80,617	0/0:13,0:13:36.56:0,37,446	0/0:20,0:20:47.12:0,47,612	0/1:9,8:17:13.53:14,0,216	0/0:29,0:28:75.36:0,75,822	0/0:20,0:20:59.92:0,60,757	0/0:19,0:19:40.23:0,40,391	0/0:18,0:17:38.92:0,39,390	0/0:19,0:19:39.54:0,40,378	0/0:27,0:27:68.34:0,68,551	0/0:11,0:11:22.97:0,23,233	0/0:31,0:31:87.68:0,88,1111	0/0:23,0:23:66.21:0,66,881	0/0:22,0:22:56.41:0,56,708	0/0:31,0:31:83.44:0,83,780	0/0:29,0:29:83.73:0,84,906	0/0:21,0:21:62.61:0,63,531	0/0:5,0:5:14.88:0,15,123
chr10	47612459	.	T	TG	20890.72	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-10.131;DP=722;FS=31.300;HRun=6;HaplotypeScore=64.4616;InbreedingCoeff=0.9968;MQ=84.18;MQ0=1;MQRankSum=-10.527;QD=31.89;ReadPosRankSum=5.745;VQSLOD=2.7962;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,44:48:99:1509,120,0	1/1:0,12:12:36.12:453,36,0	0/0:30,0:29:65.58:0,66,643	0/0:37,0:36:59.21:0,59,770	1/1:2,17:18:48.15:604,48,0	1/1:2,22:24:63.20:792,63,0	1/1:3,16:19:48.15:604,48,0	1/1:3,33:36:99:1206,99,0	1/1:1,21:22:60.19:752,60,0	1/1:3,23:26:69.19:849,69,0	1/1:2,19:22:54.17:679,54,0	1/1:1,26:27:63.20:789,63,0	1/1:1,32:33:84.27:1057,84,0	1/1:2,29:31:72.23:906,72,0	1/1:1,30:31:78.25:981,78,0	1/1:1,28:29:72.23:902,72,0	1/1:2,22:24:66.21:830,66,0	1/1:1,15:16:45.14:566,45,0	1/1:2,7:9:21.07:263,21,0	1/1:0,24:24:69.22:868,69,0	1/1:2,29:31:75.24:944,75,0	1/1:1,29:30:81.26:1017,81,0	1/1:7,17:24:51.16:631,51,0	1/1:2,24:26:66.21:827,66,0	1/1:4,17:20:42.13:528,42,0	1/1:3,28:31:84.27:1051,84,0	1/1:2,27:30:78.25:981,78,0	1/1:0,10:10:24.08:302,24,0
chr10	47613796	.	ATTGCTGGG	A	2623.23	PASS	AB=0.714;AC=9;AF=0.161;AN=56;BaseQRankSum=8.009;DP=517;FS=3.920;HRun=0;HaplotypeScore=130.0418;InbreedingCoeff=0.6294;MQ=81.94;MQ0=1;MQRankSum=-7.473;QD=20.99;ReadPosRankSum=3.956;VQSLOD=2.9613;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:12,24:35:3.25:662,0,3	0/0:4,0:4:6.02:0,6,186	0/0:26,0:24:38.33:0,38,912	0/0:26,0:26:33.27:0,33,510	0/0:8,0:8:18.06:0,18,731	0/0:17,0:17:30.10:0,30,1020	0/0:28,0:28:51.18:0,51,1997	0/0:19,0:19:24.06:0,24,703	1/1:7,3:8:18.01:404,18,0	0/0:17,0:17:45.15:0,45,1851	0/0:8,0:8:15.05:0,15,362	0/1:9,9:17:16.06:564,0,16	1/1:10,12:21:18.06:457,18,0	0/0:16,0:15:42.13:0,42,1432	0/0:13,0:13:33.11:0,33,1195	0/0:7,0:7:18.06:0,18,726	0/0:41,0:41:78.18:0,78,2748	0/0:33,0:33:75.12:0,75,2369	0/0:17,0:17:24.07:0,24,680	0/0:7,0:7:12.04:0,12,420	0/0:40,0:40:87.30:0,87,3017	1/1:7,11:18:12:245,12,0	0/0:6,4:10:2.77:0,3,88	0/1:18,3:19:2.85:444,0,3	0/0:9,0:9:16.30:0,16,615	0/0:18,0:18:36.12:0,36,1264	0/0:21,0:21:42.11:0,42,1208	0/0:7,0:7:18.06:0,18,542
chr10	47614059	.	T	TG	380.64	PASS	AB=0.840;AC=6;AF=0.107;AN=56;BaseQRankSum=8.635;DP=549;FS=2.462;HRun=2;HaplotypeScore=79.6586;InbreedingCoeff=-0.1242;MQ=74.77;MQ0=1;MQRankSum=-7.275;QD=4.09;ReadPosRankSum=0.767;VQSLOD=0.6332;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:18,2:17:89.93:90,0,239	0/0:11,0:11:33.10:0,33,409	0/0:33,0:24:30.23:0,30,573	0/0:29,0:25:60.07:0,60,642	0/0:17,0:17:48.15:0,48,595	0/0:19,0:19:51.12:0,51,615	0/0:37,0:37:99:0,111,1349	0/0:23,0:23:63.20:0,63,781	0/1:8,6:12:99:141,0,109	0/0:14,0:14:38.94:0,39,481	0/0:19,0:19:57.17:0,57,694	0/1:13,6:15:66.80:67,0,226	0/1:7,0:7:24.21:24,0,96	0/0:17,0:17:51.15:0,51,615	0/0:19,0:19:57.17:0,57,694	0/0:17,0:17:45.12:0,45,533	0/0:26,1:26:64.45:0,64,904	0/0:28,0:28:81.24:0,81,991	0/0:14,0:14:33.09:0,33,398	0/0:17,0:17:51.14:0,51,619	0/0:36,1:34:93.25:0,93,1135	0/1:18,2:19:99:141,0,211	0/1:9,4:13:41.62:42,0,165	0/0:15,1:16:6.74:0,7,295	0/0:16,0:16:48.11:0,48,566	0/0:22,0:22:60.17:0,60,723	0/0:18,0:18:51.11:0,51,604	0/0:6,0:6:18.06:0,18,223
chr10	47614060	.	GGTTGCT	G	1527.10	PASS	AB=0.823;AC=7;AF=0.125;AN=56;BaseQRankSum=7.686;DP=557;FS=4.838;HRun=0;HaplotypeScore=127.4791;InbreedingCoeff=-0.1432;MQ=75.24;MQ0=1;MQRankSum=-7.714;QD=14.01;ReadPosRankSum=-0.010;VQSLOD=2.5327;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:15,5:17:99:354,0,482	0/0:11,0:11:33.11:0,33,1086	0/0:35,0:25:52.19:0,52,1256	0/0:30,0:26:36.63:0,37,1338	0/0:17,0:17:48.16:0,48,1608	0/0:19,0:19:57.15:0,57,1556	0/0:38,0:38:99:0,114,3462	0/0:26,0:26:78.26:0,78,1959	0/1:13,1:12:99:367,0,145	0/0:14,0:14:39.12:0,39,1243	0/0:19,0:19:57.19:0,57,1737	0/1:17,2:15:99:169,0,260	0/1:4,3:7:99:172,0,164	0/0:18,0:18:54.17:0,54,1522	0/0:20,0:20:60.20:0,60,1812	0/0:17,0:17:45.15:0,45,1480	0/0:27,0:26:73.65:0,74,2569	0/0:29,0:29:84.29:0,84,2719	0/0:12,0:12:33.10:0,33,740	0/0:17,0:17:51.15:0,51,1470	0/0:37,0:34:66.65:0,67,3026	0/1:12,8:19:99:355,0,231	0/1:9,4:13:99:196,0,230	0/1:15,1:16:45.10:45,0,366	0/0:16,0:16:48.16:0,48,1478	0/0:22,0:22:60.19:0,60,1623	0/0:18,0:18:51.12:0,51,1579	0/0:6,0:6:18.06:0,18,658
chr10	47614066	.	T	TG	1462.50	PASS	AB=0.806;AC=7;AF=0.125;AN=56;BaseQRankSum=7.313;DP=575;FS=9.865;HRun=2;HaplotypeScore=82.0840;InbreedingCoeff=-0.1458;MQ=76.11;MQ0=1;MQRankSum=-5.873;QD=12.83;ReadPosRankSum=-1.325;VQSLOD=1.2155;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:17,7:21:99:359,0,209	0/0:11,0:11:33.10:0,33,409	0/0:35,0:25:9.20:0,9,643	0/0:28,1:26:37.40:0,37,630	0/0:18,0:18:51.15:0,51,620	0/0:21,0:21:57.16:0,57,693	0/0:37,0:37:99:0,108,1338	0/0:23,0:23:66.20:0,66,808	0/1:9,5:12:47.15:266,0,47	0/0:21,0:21:53.99:0,54,669	0/0:19,0:19:54.13:0,54,652	0/1:13,7:16:99:220,0,116	0/1:8,0:8:73.79:105,0,74	0/0:19,0:19:51.16:0,51,632	0/0:22,0:22:63.11:0,63,739	0/0:16,0:16:42.13:0,42,521	0/0:31,1:31:70.59:0,71,1058	0/0:29,0:29:84.26:0,84,1041	0/0:10,0:10:27.06:0,27,312	0/0:19,0:19:54.14:0,54,641	0/0:36,3:36:61.60:0,62,1175	0/1:16,3:18:63.35:334,0,63	0/1:9,4:13:99:131,0,144	0/1:11,5:16:99:177,0,172	0/0:16,0:16:42.13:0,42,521	0/0:21,0:21:51.12:0,51,615	0/0:17,0:17:51.14:0,51,616	0/0:6,0:6:18.06:0,18,223
chr10	47614488	.	T	TA	8843.94	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-13.878;DP=638;FS=0.340;HRun=10;HaplotypeScore=71.0673;InbreedingCoeff=0.9462;MQ=62.87;MQ0=1;MQRankSum=-0.671;QD=22.22;ReadPosRankSum=1.583;VQSLOD=5.7132;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:27:70.91:0,71,563	1/1:0,4:3:6.02:64,6,0	0/0:18,0:17:14.40:0,14,168	0/0:12,0:8:8.95:0,9,74	1/1:3,21:23:51.13:544,51,0	1/1:2,23:25:57.14:608,57,0	1/1:2,17:19:42.05:435,42,0	0/0:34,0:34:88.76:0,89,704	0/0:15,0:15:35.93:0,36,291	1/1:2,21:23:38.32:587,38,0	1/1:7,15:23:20.19:368,20,0	0/0:20,0:21:55.90:0,56,438	0/0:19,0:19:35.89:0,36,290	0/0:29,0:29:68.88:0,69,563	1/1:6,25:30:44.46:665,44,0	1/1:6,10:16:2.43:231,2,0	1/1:2,30:32:81.20:864,81,0	1/1:5,19:23:51.13:544,51,0	1/1:14,14:27:35.46:558,35,0	1/1:6,25:30:66.16:702,66,0	1/1:6,17:24:44.93:454,45,0	0/0:13,0:14:31.94:0,32,245	0/0:19,0:18:41.93:0,42,343	0/0:27,0:29:69.90:0,70,551	1/1:2,13:15:36.09:384,36,0	1/1:6,24:30:72.16:759,72,0	1/1:5,19:23:48.10:503,48,0	1/1:3,21:24:54.14:576,54,0
chr10	47614620	.	A	ACC	20839.18	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-6.704;DP=539;FS=1.467;HRun=2;HaplotypeScore=69.9498;InbreedingCoeff=0.9871;MQ=84.11;MQ0=0;MQRankSum=-9.389;QD=41.60;ReadPosRankSum=5.019;VQSLOD=4.9155;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,16:21:48.13:860,48,0	1/1:1,6:7:20.99:353,21,0	0/0:22,0:22:66.19:0,66,902	0/0:16,0:16:39.11:0,39,536	1/1:1,18:19:41.91:748,42,0	1/1:5,17:22:57.16:972,57,0	1/1:3,17:20:48.11:830,48,0	1/1:3,44:47:99:2083,129,0	1/1:2,8:10:24.08:449,24,0	1/1:0,21:21:63.20:1145,63,0	1/1:0,11:11:18.06:335,18,0	1/1:1,9:10:24.08:447,24,0	1/1:2,14:16:29.97:541,30,0	1/1:1,14:14:29.78:561,30,0	1/1:4,21:24:57.15:1029,57,0	1/1:0,12:12:23.74:448,24,0	1/1:0,37:36:71.81:1346,72,0	1/1:5,11:16:45.08:742,45,0	1/1:3,18:21:57.19:1001,57,0	1/1:0,14:14:33.11:615,33,0	1/1:2,41:43:87.30:1628,87,0	1/1:3,9:12:21.06:361,21,0	1/1:2,9:11:29.89:532,30,0	1/1:5,19:24:42.57:749,43,0	1/1:0,15:15:30.10:561,30,0	1/1:0,20:20:60.16:1046,60,0	1/1:2,13:11:33.11:616,33,0	1/1:0,16:16:45.15:841,45,0
chr10	47614655	.	C	CT	910.88	PASS	AB=0.915;AC=19;AF=0.339;AN=56;BaseQRankSum=0.411;DP=471;FS=3.467;HRun=13;HaplotypeScore=94.2576;InbreedingCoeff=0.4969;MQ=64.90;MQ0=6;MQRankSum=-4.506;QD=5.80;ReadPosRankSum=0.152;VQSLOD=2.7050;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:14,11:23:42.67:351,43,0	0/0:3,0:6:9.75:0,10,28	0/0:14,0:9:0.41:0,0,14	0/1:9,0:8:3.25:7,0,3	0/0:13,1:15:25.66:0,26,170	0/0:11,0:20:24.85:0,25,84	0/0:6,0:13:9.88:0,10,66	0/0:37,0:32:24.73:0,25,267	1/1:5,3:8:11.93:100,12,0	0/0:16,1:18:9.81:0,10,202	0/0:11,0:11:14.79:0,15,101	1/1:4,2:6:11.92:94,12,0	1/1:10,2:13:5.12:68,5,0	0/1:15,0:13:9.46:9,0,32	0/0:7,0:13:13.81:0,14,39	1/1:9,0:10:5.80:34,6,0	0/0:40,1:40:40.39:0,40,424	0/0:19,0:22:48.12:0,48,301	0/0:12,0:11:17.81:0,18,123	0/0:14,1:16:3.90:0,4,162	0/0:27,0:27:33.83:0,34,228	1/1:6,4:11:3.08:138,3,0	1/1:6,5:11:15.02:138,15,0	0/1:10,4:15:40.98:112,0,41	0/1:13,1:15:5.05:5,0,106	0/0:27,0:23:20.19:0,20,232	0/1:13,2:14:33.85:34,0,98	0/0:18,0:20:21.45:0,21,201
chr10	47614747	.	A	AC	3976.78	PASS	AB=0.791;AC=32;AF=0.593;AN=54;BaseQRankSum=-9.897;DP=551;FS=0.510;HRun=8;HaplotypeScore=62.9420;InbreedingCoeff=-0.2599;MQ=35.54;MQ0=67;MQRankSum=3.863;QD=8.52;ReadPosRankSum=4.223;VQSLOD=0.8653;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,1:24:22.17:0,22,79	1/1:3,5:4:6.02:69,6,0	0/0:15,0:3:8.75:0,9,66	./.	0/1:16,12:26:28.10:346,0,28	0/1:18,8:23:29.24:221,0,29	0/1:15,2:11:5.14:42,0,5	0/1:13,7:14:9.39:156,0,9	0/1:6,0:5:3.76:4,0,34	1/1:12,6:17:16.34:221,16,0	0/1:14,2:15:18.96:70,0,19	0/1:15,0:11:32.33:32,0,75	0/1:14,0:15:8.64:9,0,67	1/1:12,5:9:2.03:94,2,0	0/1:9,5:9:33.79:152,0,34	0/0:25,0:20:42.80:0,43,285	0/1:37,18:45:18.45:549,0,18	1/1:14,16:25:18.15:555,18,0	1/1:6,1:4:6.02:69,6,0	0/1:12,4:12:9.07:134,0,9	1/1:5,7:8:9.03:104,9,0	1/1:7,0:6:8.74:51,9,0	0/1:10,0:13:19.53:32,0,20	0/1:13,0:8:15.49:15,0,41	1/1:11,8:18:0.80:243,1,0	0/1:23,7:24:99:288,0,188	0/1:12,18:23:93.04:269,0,93	0/1:13,7:18:45.20:251,0,45
chr10	47616213	.	T	TAAAA	4745.88	PASS	AB=0.843;AC=45;AF=0.833;AN=54;BaseQRankSum=-2.452;DP=421;FS=12.008;HRun=13;HaplotypeScore=89.1771;InbreedingCoeff=0.2604;MQ=64.17;MQ0=5;MQRankSum=-2.335;QD=11.81;ReadPosRankSum=1.426;VQSLOD=0.6731;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,0:18:30.01:484,30,0	1/1:0,0:3:8.94:90,9,0	0/1:18,0:11:1.90:12,0,2	0/1:15,0:8:25.54:26,0,56	1/1:0,0:8:5.42:65,5,0	1/1:7,0:20:22.32:166,22,0	0/0:4,0:8:3.65:0,4,9	0/1:15,0:33:69.45:133,0,69	1/1:1,0:10:21.02:386,21,0	1/1:8,0:15:21.52:155,22,0	1/1:2,0:13:27.26:188,27,0	1/1:0,0:10:12.04:260,12,0	1/1:4,1:16:27.07:480,27,0	0/0:5,0:10:2.65:0,3,11	1/1:0,0:9:15.94:119,16,0	1/1:5,0:14:20.44:139,20,0	1/1:8,0:46:56.58:555,57,0	1/1:4,1:24:32.99:250,33,0	1/1:8,0:20:36.70:281,37,0	1/1:4,1:14:17.55:102,18,0	1/1:7,0:10:9.24:52,9,0	0/1:1,0:1:0:0,0,0	./.	1/1:0,0:8:9.03:146,9,0	1/1:3,0:12:8.81:67,9,0	1/1:5,0:16:29.30:228,29,0	0/1:6,0:16:43.66:121,0,44	1/1:13,0:26:33.57:241,34,0
chr10	47616530	.	A	AC	3951.72	PASS	AB=0.857;AC=54;AF=0.964;AN=56;BaseQRankSum=2.408;DP=386;FS=12.651;HRun=1;HaplotypeScore=229.5463;InbreedingCoeff=-0.0410;MQ=63.45;MQ0=0;MQRankSum=-3.601;QD=10.24;ReadPosRankSum=0.329;VQSLOD=-0.0702;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:24,1:25:25.25:140,25,0	1/1:5,0:5:8.71:61,9,0	0/1:6,4:10:3.97:30,0,4	0/1:8,0:8:11.82:28,0,12	1/1:17,0:17:8.34:68,8,0	1/1:14,0:14:27.92:149,28,0	1/1:20,0:20:33.50:172,33,0	1/1:18,0:18:47.28:356,47,0	1/1:11,3:14:28.05:155,28,0	1/1:13,0:13:35.93:228,36,0	1/1:11,0:11:5.32:22,5,0	1/1:19,0:19:49.11:256,49,0	1/1:17,0:17:36.45:159,36,0	1/1:17,0:17:27.95:172,28,0	1/1:11,0:11:24.24:102,24,0	1/1:16,0:16:41.89:231,42,0	1/1:18,0:18:39.81:230,40,0	1/1:8,0:8:14.25:81,14,0	1/1:9,0:9:13.95:77,14,0	1/1:12,0:12:16.95:91,17,0	1/1:11,0:11:16.28:79,16,0	1/1:11,0:11:13.74:66,14,0	1/1:8,0:8:8.22:36,8,0	1/1:13,0:13:12.90:49,13,0	1/1:18,0:18:36.33:248,36,0	1/1:13,1:14:32.14:231,32,0	1/1:23,0:23:48.49:343,48,0	1/1:6,0:6:17.12:89,17,0
chr10	47616551	.	C	CG	1575.44	PASS	AC=36;AF=1.000;AN=36;DP=113;FS=0.000;HRun=0;HaplotypeScore=195.0058;InbreedingCoeff=-0.0230;MQ=45.17;MQ0=0;QD=16.76;VQSLOD=4.1758;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	./.	1/1:0,6:6:11.35:83,11,0	1/1:0,3:3:8.84:59,9,0	1/1:0,2:2:5.96:44,6,0	1/1:0,9:9:26.45:172,26,0	1/1:0,2:2:5.90:43,6,0	./.	1/1:0,11:11:29.62:202,30,0	1/1:1,9:10:28.70:173,29,0	1/1:0,6:6:17.62:113,18,0	1/1:0,6:6:11.94:90,12,0	1/1:0,11:11:32.68:230,33,0	1/1:1,10:11:20.51:152,21,0	1/1:0,2:2:4.79:26,5,0	./.	./.	1/1:0,1:1:2.88:15,3,0	1/1:0,1:1:2.90:16,3,0	1/1:0,2:2:2.92:17,3,0	1/1:0,4:4:8.92:61,9,0	./.	./.	1/1:0,5:5:14.82:103,15,0	1/1:0,2:2:6:51,6,0
chr10	47616600	.	A	AGG	8234.13	PASS	AB=0.800;AC=53;AF=0.946;AN=56;BaseQRankSum=2.139;DP=378;FS=1.820;HRun=0;HaplotypeScore=236.6440;InbreedingCoeff=0.5360;MQ=54.93;MQ0=0;MQRankSum=-3.577;QD=22.08;ReadPosRankSum=3.378;VQSLOD=5.3089;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,13:22:32.81:257,33,0	1/1:0,7:7:20.94:165,21,0	0/1:6,2:8:0.09:112,0,0	0/0:5,0:5:4.50:0,4,22	1/1:4,14:18:44.77:415,45,0	1/1:0,16:16:44.90:364,45,0	1/1:4,15:19:50.68:428,51,0	1/1:0,16:16:48.08:501,48,0	1/1:0,16:16:41.90:366,42,0	1/1:1,12:14:41.64:414,42,0	1/1:1,11:12:29.76:236,30,0	1/1:0,12:12:35.30:285,35,0	1/1:1,18:19:53.63:432,54,0	1/1:1,14:15:35.88:293,36,0	1/1:1,15:16:41.90:337,42,0	1/1:3,12:15:44.19:423,44,0	1/1:3,15:18:38.45:361,38,0	1/1:0,6:6:12.03:130,12,0	1/1:3,11:14:33.04:345,33,0	1/1:3,16:19:41.03:353,41,0	1/1:1,4:5:2.19:10,2,0	1/1:1,14:16:37.94:284,38,0	1/1:0,9:9:26.35:185,26,0	1/1:1,7:8:17.86:134,18,0	1/1:0,14:14:41.90:334,42,0	1/1:5,10:15:42.05:493,42,0	1/1:1,17:19:51.39:418,51,0	1/1:1,4:5:15.02:159,15,0
chr10	47619453	.	TGG	T	16497.20	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-5.276;DP=608;FS=7.403;HRun=9;HaplotypeScore=89.2655;InbreedingCoeff=0.9610;MQ=72.81;MQ0=2;MQRankSum=-6.972;QD=28.59;ReadPosRankSum=5.658;VQSLOD=4.6272;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,27:31:66.19:769,66,0	1/1:1,12:13:33.10:383,33,0	0/0:18,0:17:41.32:0,41,520	0/0:13,0:11:8.16:0,8,196	1/1:5,23:28:66.17:768,66,0	1/1:0,20:20:51.15:594,51,0	1/1:0,30:30:75.22:874,75,0	1/1:5,13:18:39.08:432,39,0	1/1:3,9:12:24.06:280,24,0	1/1:3,24:27:72.21:839,72,0	1/1:1,24:25:60.17:699,60,0	1/1:0,13:13:33.10:385,33,0	1/1:3,11:14:30.08:350,30,0	1/1:1,15:16:36.11:419,36,0	1/1:1,22:23:62.76:733,63,0	1/1:0,15:15:38.96:454,39,0	1/1:1,42:41:99:1363,117,0	1/1:2,15:17:33.09:383,33,0	1/1:5,13:18:39.09:445,39,0	1/1:6,23:29:66.18:768,66,0	1/1:1,22:23:60.18:699,60,0	1/1:4,15:19:45.12:524,45,0	1/1:0,25:25:72.21:839,72,0	1/1:2,25:28:68.94:781,69,0	1/1:2,17:19:51.15:594,51,0	1/1:4,30:34:90.25:1039,90,0	1/1:6,21:27:63.17:733,63,0	1/1:0,10:10:30.09:350,30,0
chr10	47619461	.	GGT	G	4902.54	PASS	AB=1.000;AC=46;AF=0.821;AN=56;BaseQRankSum=5.963;DP=585;FS=0.508;HRun=0;HaplotypeScore=127.0115;InbreedingCoeff=0.2071;MQ=73.42;MQ0=2;MQRankSum=-4.117;QD=8.83;ReadPosRankSum=11.226;VQSLOD=3.2409;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:31,0:31:24.34:187,0,24	1/1:12,0:12:29.74:131,30,0	0/0:17,0:16:35.88:0,36,493	0/0:13,0:11:12.64:0,13,234	1/1:24,1:25:37.99:263,38,0	1/1:22,0:22:11.78:157,12,0	1/1:32,0:32:25.51:251,26,0	0/1:15,0:15:24.16:71,0,24	0/1:11,0:11:12.15:71,0,12	1/1:25,0:25:32.99:238,33,0	1/1:26,0:26:0.84:195,1,0	1/1:13,0:13:30.28:149,30,0	1/1:12,0:12:5.45:105,5,0	1/1:16,0:16:12.55:154,13,0	1/1:22,0:22:56.72:271,57,0	1/1:16,0:16:17.46:149,17,0	1/1:44,0:42:73.49:431,73,0	0/1:16,0:16:6.32:115,0,6	0/1:15,0:15:17.14:81,0,17	1/1:24,1:25:5.72:234,6,0	1/1:23,0:23:30.85:188,31,0	1/1:15,0:15:40.21:169,40,0	1/1:27,0:27:44.70:256,45,0	0/1:30,0:30:37.31:181,0,37	1/1:17,0:17:45.66:195,46,0	1/1:30,0:30:71.51:288,72,0	1/1:23,2:24:8.88:260,9,0	1/1:10,0:10:26.91:113,27,0
chr10	47623237	.	A	AG	683.62	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.835;DP=605;FS=0.837;HRun=4;HaplotypeScore=77.3873;InbreedingCoeff=0.9966;MQ=77.32;MQ0=0;MQRankSum=-4.659;QD=34.18;ReadPosRankSum=-0.509;VQSLOD=3.8612;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,120,1337	0/0:14,0:14:36.10:0,36,408	0/0:15,0:14:31.42:0,31,332	0/0:16,0:16:35.62:0,36,401	0/0:22,0:22:63.18:0,63,714	0/0:15,0:15:45.13:0,45,511	0/0:24,0:24:63.18:0,63,714	0/0:25,0:25:54.93:0,55,643	0/0:25,0:25:72.21:0,72,816	0/0:29,0:29:81.22:0,81,911	0/0:17,0:17:45.13:0,45,510	0/0:21,0:21:57.16:0,57,647	0/0:31,0:31:84.24:0,84,953	0/0:21,0:21:54.15:0,54,612	0/0:20,0:20:60.17:0,60,681	1/1:0,20:20:57.19:779,57,0	0/0:24,0:24:72.21:0,72,817	0/0:12,0:12:36.10:0,36,408	0/0:9,0:9:24.06:0,24,264	0/0:11,0:11:30.09:0,30,340	0/0:24,0:24:72.19:0,72,805	0/0:20,0:20:60.14:0,60,661	0/0:15,0:15:39.11:0,39,442	0/0:42,0:42:99:0,120,1359	0/0:32,0:32:96.27:0,96,1089	0/0:26,0:26:72.20:0,72,809	0/0:17,0:17:48.14:0,48,544	0/0:15,0:15:45.13:0,45,510
chr10	47623256	.	CA	C	738.97	PASS	AB=0.969;AC=12;AF=0.214;AN=56;BaseQRankSum=16.659;DP=612;FS=3.312;HRun=1;HaplotypeScore=79.0121;InbreedingCoeff=0.6249;MQ=86.07;MQ0=0;MQRankSum=-2.116;QD=3.50;ReadPosRankSum=5.926;VQSLOD=0.3916;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:43,1:44:27.82:192,28,0	0/0:11,0:11:33.11:0,33,459	0/0:18,1:19:47.44:0,47,553	0/0:25,0:25:48.52:0,49,584	0/0:18,0:18:51.11:0,51,644	0/0:17,0:17:51.15:0,51,692	0/0:24,0:24:60.02:0,60,850	0/0:21,0:21:54.15:0,54,682	1/1:24,0:24:16.86:94,17,0	0/0:34,0:34:99:0,99,1267	0/0:18,0:18:51.12:0,51,652	1/1:21,0:21:8.20:64,8,0	0/1:30,1:31:52.97:136,0,53	0/0:17,0:17:51.16:0,51,689	0/0:19,0:19:57.12:0,57,695	1/1:16,0:16:40.81:165,41,0	0/0:34,0:34:99:0,102,1355	0/0:14,0:14:42.14:0,42,584	0/0:9,0:9:27.04:0,27,313	0/0:11,0:11:33.10:0,33,436	0/0:24,0:24:72.17:0,72,917	0/1:20,0:20:14.03:49,0,14	0/1:12,1:13:0.02:61,0,0	0/1:41,1:42:28.82:150,0,29	0/0:29,0:29:87.26:0,87,1164	0/0:26,0:26:75.21:0,75,985	0/0:16,0:16:32.92:0,33,591	0/0:15,0:15:45.13:0,45,607
chr10	47623257	.	AC	A	5043.09	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=11.342;DP=618;FS=2.894;HRun=8;HaplotypeScore=65.7361;InbreedingCoeff=0.9964;MQ=87.56;MQ0=0;MQRankSum=-1.811;QD=24.01;ReadPosRankSum=4.261;VQSLOD=5.6138;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,40:45:85.45:990,85,0	0/0:11,0:11:33.10:0,33,397	0/0:22,0:22:45.06:0,45,483	0/0:25,0:25:51.77:0,52,578	0/0:18,0:18:45.13:0,45,532	0/0:18,0:18:54.15:0,54,640	0/0:22,2:24:34.22:0,34,696	0/0:22,0:22:42.59:0,43,497	1/1:1,23:24:63.10:608,63,0	0/0:34,0:34:84.12:0,84,990	0/0:18,0:18:42.13:0,42,507	1/1:1,20:21:51.08:492,51,0	1/1:5,25:30:75.12:724,75,0	0/0:17,0:17:48.15:0,48,580	0/0:20,0:20:45.11:0,45,521	1/1:1,15:16:48.08:462,48,0	0/0:35,0:35:99:0,101,1188	0/0:14,0:14:42.13:0,42,507	0/0:8,0:8:18.06:0,18,217	0/0:11,0:11:33.09:0,33,385	0/0:24,0:24:60.18:0,60,724	1/1:2,18:20:51.08:492,51,0	1/1:2,11:13:33.05:319,33,0	1/1:6,35:41:99:955,99,0	0/0:29,0:29:84.26:0,84,1013	0/0:26,0:26:66.18:0,66,777	0/0:16,1:17:16.21:0,16,468	0/0:15,0:15:42.13:0,42,507
chr10	47624140	.	AG	A	1715.24	PASS	AB=0.579;AC=23;AF=0.767;AN=30;BaseQRankSum=2.939;DP=525;FS=0.000;HRun=1;HaplotypeScore=51.5703;InbreedingCoeff=0.7092;MQ=13.36;MQ0=391;MQRankSum=-0.287;QD=7.21;ReadPosRankSum=-0.355;VQSLOD=0.3582;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	1/1:1,8:8:14.99:167,15,0	./.	./.	1/1:2,16:15:21.02:268,21,0	1/1:24,1:1:3.01:42,3,0	1/1:15,2:2:2.97:20,3,0	./.	./.	1/1:5,10:8:21.07:291,21,0	1/1:4,11:11:17.93:203,18,0	./.	./.	./.	./.	0/0:22,0:6:9.03:0,9,134	1/1:53,1:1:3.01:42,3,0	./.	./.	1/1:6,11:11:11.99:144,12,0	./.	0/0:15,0:11:18.06:0,18,267	0/0:14,0:12:29.95:0,30,391	./.	1/1:0,12:12:26.96:327,27,0	1/1:19,4:3:9.03:125,9,0	1/1:17,5:5:15.05:208,15,0	0/1:3,8:7:0:0,0,0
chr10	47626077	.	GA	G	7162.75	PASS	AB=0.783;AC=38;AF=0.679;AN=56;BaseQRankSum=10.065;DP=628;FS=0.359;HRun=12;HaplotypeScore=68.5572;InbreedingCoeff=0.8062;MQ=68.28;MQ0=1;MQRankSum=0.260;QD=15.61;ReadPosRankSum=2.733;VQSLOD=5.8169;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,3:29:31.64:0,32,659	1/1:1,9:11:25.94:192,26,0	0/1:18,0:9:14.74:15,0,27	0/0:12,0:10:5.07:0,5,21	1/1:4,26:33:71.30:514,71,0	1/1:4,15:20:39.93:291,40,0	1/1:3,5:8:8.96:70,9,0	1/1:12,22:34:58.70:445,59,0	0/0:19,1:20:30.86:0,31,488	1/1:3,23:28:72.80:543,73,0	1/1:6,21:27:62.75:487,63,0	0/0:27,0:28:65.90:0,66,621	0/0:18,1:19:27.81:0,28,446	1/1:5,20:25:59.75:464,60,0	1/1:0,22:23:61.81:470,62,0	1/1:2,0:29:48.82:141,49,0	1/1:4,22:26:53.78:418,54,0	1/1:2,13:17:42.90:313,43,0	1/1:2,17:20:26.15:363,26,0	1/1:3,27:30:50.22:571,50,0	0/1:4,13:17:46.49:234,0,46	0/0:21,0:21:57.08:0,57,565	0/0:22,0:24:53.93:0,54,520	0/0:15,0:15:16.38:0,16,343	1/1:3,18:21:23.54:364,24,0	1/1:2,28:33:62.34:637,62,0	1/1:3,26:30:40.31:486,40,0	1/1:2,6:9:19.96:145,20,0
chr10	47626631	.	C	CAAA	5137.94	PASS	AB=0.832;AC=50;AF=0.893;AN=56;BaseQRankSum=-0.511;DP=543;FS=4.398;HRun=17;HaplotypeScore=109.0079;InbreedingCoeff=0.0703;MQ=79.98;MQ0=2;MQRankSum=-1.543;QD=9.96;ReadPosRankSum=-0.622;VQSLOD=1.7334;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:29:25.36:279,25,0	1/1:3,0:9:8.34:49,8,0	0/1:45,0:25:23.76:24,0,33	0/0:26,0:18:1.02:0,1,13	1/1:16,1:20:24.99:181,25,0	0/1:8,0:18:14.93:56,0,15	1/1:14,0:13:14.24:92,14,0	1/1:25,0:24:43.93:348,44,0	1/1:8,0:8:17.82:207,18,0	1/1:21,0:20:13.94:306,14,0	0/1:9,0:16:34.09:34,0,39	1/1:14,0:13:20.88:177,21,0	1/1:10,0:11:13.90:105,14,0	0/1:14,0:14:3.67:159,0,4	1/1:12,1:13:18.01:201,18,0	1/1:4,0:20:11.56:89,12,0	1/1:7,8:17:16.53:176,17,0	1/1:9,0:9:6.15:162,6,0	1/1:13,0:21:32.81:285,33,0	1/1:32,0:33:32.10:517,32,0	1/1:10,0:8:15.34:136,15,0	1/1:18,0:19:34.18:355,34,0	1/1:12,0:14:22.64:228,23,0	1/1:5,0:17:6.01:66,6,0	1/1:7,4:16:8.12:74,8,0	1/1:14,18:39:63.63:566,64,0	1/1:9,13:24:12.04:189,12,0	1/1:8,0:14:9.84:74,10,0
chr10	47631736	.	TA	T	6120.82	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=0.395;DP=419;FS=7.249;HRun=10;HaplotypeScore=38.6756;InbreedingCoeff=0.9417;MQ=47.85;MQ0=37;MQRankSum=0.002;QD=18.95;ReadPosRankSum=-0.816;VQSLOD=4.8234;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:10:24.05:0,24,255	1/1:1,5:5:12:104,12,0	0/0:6,0:6:18.04:0,18,187	0/0:2,0:2:2.95:0,3,33	1/1:0,14:15:38.03:319,38,0	1/1:5,21:24:56.98:495,57,0	1/1:2,10:11:29.99:260,30,0	1/1:11,29:34:86.97:755,87,0	0/0:19,1:20:27.89:0,28,501	1/1:2,19:21:56.98:492,57,0	1/1:2,9:11:26.99:234,27,0	0/0:12,0:10:27.07:0,27,299	0/0:18,1:19:28.12:0,28,535	1/1:4,16:17:41.99:365,42,0	1/1:2,21:22:53.98:469,54,0	1/1:1,11:11:24:208,24,0	1/1:4,10:11:23.99:208,24,0	1/1:5,8:11:25.81:214,26,0	1/1:5,11:14:20.58:291,21,0	1/1:0,8:8:18:156,18,0	1/1:2,10:10:26.99:234,27,0	0/0:5,0:5:12.03:0,12,129	0/0:12,0:11:24.02:0,24,252	0/0:5,0:4:12.03:0,12,133	1/1:0,8:8:21:182,21,0	1/1:6,14:16:8.79:301,9,0	1/1:5,19:19:47.99:417,48,0	1/1:4,17:20:47.98:417,48,0
chr10	47633163	.	CTACCAGCCTAGAAGG	C	2064.96	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.790;DP=595;FS=0.000;HRun=0;HaplotypeScore=236.7853;InbreedingCoeff=0.9977;MQ=78.19;MQ0=0;MQRankSum=-6.103;QD=89.78;ReadPosRankSum=0.959;VQSLOD=3.2124;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,135,9080	0/0:12,0:12:36.12:0,36,2700	0/0:27,0:27:72.24:0,72,4255	0/0:20,0:20:50.57:0,51,3042	0/0:13,0:13:39.13:0,39,2567	0/0:14,0:14:42.14:0,42,2387	0/0:25,0:25:75.26:0,75,4873	0/0:34,0:34:99:0,99,5580	0/0:30,0:30:84.29:0,84,5754	0/0:22,0:22:63.22:0,63,4015	0/0:9,0:9:27.09:0,27,1914	0/0:17,0:17:51.18:0,51,3553	0/0:28,0:28:84.29:0,84,6056	0/0:19,0:19:57.20:0,57,3592	0/0:23,0:23:69.22:0,69,4503	1/1:1,22:23:48.64:2160,49,0	0/0:21,0:21:60.18:0,60,3994	0/0:20,0:20:60.21:0,60,4178	0/0:17,0:17:51.17:0,51,2642	0/0:20,0:20:60.17:0,60,3830	0/0:27,0:27:81.28:0,81,5470	0/0:9,0:9:27.09:0,27,1852	0/0:13,0:13:39.13:0,39,2113	0/0:21,0:21:60.21:0,60,3920	0/0:19,0:19:57.20:0,57,4028	0/0:18,0:18:54.18:0,54,3126	0/0:28,0:28:81.28:0,81,5631	0/0:19,0:19:57.20:0,57,4194
chr10	47633623	.	T	TCATATATATATATATA	11932.13	PASS	AB=1.000;AC=43;AF=0.896;AN=48;BaseQRankSum=-0.602;DP=206;FS=6.348;HRun=0;HaplotypeScore=109.8637;InbreedingCoeff=0.4191;MQ=92.73;MQ0=0;MQRankSum=-6.807;QD=68.58;ReadPosRankSum=-1.373;VQSLOD=4.0184;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:4:11.91:87,12,0	./.	0/0:12,0:12:33.03:0,33,904	0/0:12,0:12:33.11:0,33,1113	1/1:7,0:7:3:25,3,0	./.	1/1:3,0:3:5.99:49,6,0	1/1:43,0:43:99:6899,126,0	1/1:6,0:6:11.68:143,12,0	1/1:10,0:10:18.01:511,18,0	1/1:4,0:4:9:96,9,0	1/1:2,0:2:3:25,3,0	1/1:3,0:3:2.98:24,3,0	1/1:4,5:12:24.08:1851,24,0	1/1:3,0:3:8.99:75,9,0	0/1:16,0:16:11.05:11,0,32	1/1:9,0:9:8.91:65,9,0	1/1:11,0:11:20.95:387,21,0	./.	1/1:4,0:4:3:25,3,0	1/1:2,0:2:5.99:49,6,0	./.	1/1:2,0:2:5.90:41,6,0	1/1:4,0:4:8.98:73,9,0	1/1:4,0:4:3:25,3,0	1/1:8,0:8:15.05:510,15,0	1/1:5,0:5:12.02:303,12,0	1/1:12,0:12:24.03:657,24,0
chr10	47634587	.	G	GA	3671.42	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-7.885;DP=602;FS=1.900;HRun=9;HaplotypeScore=69.2836;InbreedingCoeff=0.9637;MQ=76.22;MQ0=5;MQRankSum=-1.613;QD=23.38;ReadPosRankSum=4.319;VQSLOD=4.4467;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,31:35:71.82:796,72,0	0/0:10,0:10:26.99:0,27,234	0/0:67,0:35:2.88:0,3,299	0/0:63,0:38:16.44:0,16,455	0/0:18,0:18:50.98:0,51,442	0/0:20,0:19:47.97:0,48,412	0/0:26,0:26:36.79:0,37,534	0/0:24,0:24:30.57:0,31,419	1/1:3,14:17:47.62:504,48,0	0/0:18,0:18:44.99:0,45,390	0/0:15,0:15:35.96:0,36,306	1/1:3,14:18:39.09:423,39,0	1/1:3,17:21:44.95:479,45,0	0/0:15,0:15:29.98:0,30,260	0/0:20,0:20:50.98:0,51,442	1/1:2,16:18:39.11:431,39,0	0/0:21,0:21:47.98:0,48,416	0/0:18,0:18:47.95:0,48,409	0/0:15,0:15:32.95:0,33,282	0/0:8,0:8:21:0,21,182	0/0:14,0:14:35.96:0,36,308	1/1:7,6:13:29.90:298,30,0	1/1:2,7:9:15.04:163,15,0	1/1:3,22:26:53.98:578,54,0	0/0:12,0:12:20.97:0,21,182	0/0:20,2:22:23.78:0,24,433	0/0:23,0:23:62.95:0,63,543	0/0:15,0:15:32.98:0,33,285
chr10	47634760	.	CCCGCCGCCGCCGCCGCCGCCG	C	3026.21	PASS	AB=0.708;AC=27;AF=0.643;AN=42;BaseQRankSum=0.954;DP=182;FS=4.861;HRun=0;HaplotypeScore=81.6552;InbreedingCoeff=0.3276;MQ=67.54;MQ0=4;MQRankSum=-2.253;QD=25.01;ReadPosRankSum=0.751;VQSLOD=1.0488;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:2,0:2:3.01:0,3,47	./.	./.	./.	./.	0/0:8,0:7:0.89:0,1,2	0/1:10,0:16:28.88:42,0,29	0/0:4,0:4:0.47:0,0,1	0/0:2,0:3:3.01:0,3,33	1/1:2,2:4:3.01:66,3,0	1/1:0,1:1:3.01:60,3,0	./.	0/0:6,0:5:3.01:0,3,50	1/1:4,5:9:15.05:828,15,0	1/1:1,0:3:3:27,3,0	1/1:5,0:10:9.03:436,9,0	1/1:9,9:18:6.02:334,6,0	1/1:7,14:21:15.05:834,15,0	1/1:5,0:4:3.01:80,3,0	./.	1/1:16,1:15:0.89:2,1,0	0/0:3,0:3:2.90:0,3,16	./.	0/0:10,0:17:6.02:0,6,66	1/1:2,2:4:3.01:167,3,0	1/1:2,0:2:3.01:68,3,0	1/1:5,0:5:3.01:39,3,0	1/1:2,3:5:3.01:165,3,0
chr10	47634876	.	T	TG	2653.92	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-7.008;DP=412;FS=8.881;HRun=7;HaplotypeScore=49.1609;InbreedingCoeff=0.9524;MQ=73.18;MQ0=1;MQRankSum=-1.070;QD=27.64;ReadPosRankSum=0.884;VQSLOD=3.9993;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,15:15:42.13:507,42,0	0/0:5,0:5:12.02:0,12,116	0/0:11,0:10:16.81:0,17,142	0/0:12,0:11:23.40:0,23,209	0/0:6,0:6:15.02:0,15,145	0/0:9,0:9:27.04:0,27,261	0/0:23,0:23:57.09:0,57,550	0/0:13,0:13:27.04:0,27,261	1/1:1,15:16:41.72:507,42,0	0/0:8,0:8:21.03:0,21,203	0/0:7,0:7:18.02:0,18,174	1/1:0,15:15:42.13:507,42,0	1/1:4,11:15:36.11:424,36,0	0/0:17,0:17:45.07:0,45,434	0/0:16,0:16:39.51:0,40,372	0/0:12,0:12:36.06:0,36,348	0/0:39,0:39:99:0,105,1006	0/0:22,0:22:57.09:0,57,550	0/0:6,0:6:18.02:0,18,170	0/0:4,0:4:12.02:0,12,116	0/0:46,0:46:99:0,120,1153	1/1:1,5:6:12.04:145,12,0	1/1:2,5:7:15.05:180,15,0	1/1:2,20:22:48.15:580,48,0	0/0:22,0:22:57.09:0,57,550	0/0:21,0:21:51.07:0,51,493	0/0:14,0:14:39.06:0,39,377	0/0:2,0:2:6.01:0,6,58
chr10	47636650	.	C	CT	7166.62	PASS	AB=0.658;AC=43;AF=0.768;AN=56;BaseQRankSum=-2.428;DP=598;FS=3.151;HRun=13;HaplotypeScore=102.3759;InbreedingCoeff=0.0494;MQ=69.89;MQ0=0;MQRankSum=1.516;QD=12.57;ReadPosRankSum=-0.207;VQSLOD=4.5455;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:19,32:51:42.06:469,0,42	1/1:1,7:8:15.49:140,15,0	0/1:17,0:12:24.99:25,0,27	0/0:9,0:8:5.56:0,6,18	0/1:10,19:29:15.60:381,0,16	1/1:2,21:23:37.30:447,37,0	0/1:4,12:16:5.22:208,0,5	1/1:10,9:20:22.75:240,23,0	1/1:3,12:15:21.02:195,21,0	1/1:4,20:25:50.93:446,51,0	1/1:4,15:19:14.68:246,15,0	1/1:8,12:20:8.55:244,9,0	0/1:11,7:18:28.69:175,0,29	1/1:3,20:23:36.04:334,36,0	1/1:7,17:24:15.50:285,16,0	0/0:15,1:19:8.05:0,8,186	0/1:11,20:31:63.40:429,0,63	1/1:7,16:23:9.65:271,10,0	1/1:5,12:18:21.41:328,21,0	1/1:3,15:18:15.55:315,16,0	1/1:3,14:17:24.02:219,24,0	0/1:5,20:25:1.98:146,0,2	1/1:2,16:18:24.02:219,24,0	1/1:5,20:25:51.06:474,51,0	1/1:6,15:23:18.20:282,18,0	0/1:10,14:24:22.68:235,0,23	1/1:15,11:26:6.72:319,7,0	0/1:5,8:13:23.14:93,0,23
chr10	47637140	.	CAAA	C	15018.05	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-9.465;DP=616;FS=3.160;HRun=13;HaplotypeScore=108.9447;InbreedingCoeff=0.9522;MQ=71.12;MQ0=0;MQRankSum=-2.985;QD=26.87;ReadPosRankSum=3.488;VQSLOD=4.2828;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,21:28:41.08:509,41,0	1/1:1,4:5:11.94:126,12,0	0/0:16,0:16:6.72:0,7,292	0/0:18,0:17:24.04:0,24,315	1/1:5,32:38:93.04:1093,93,0	1/1:4,21:26:46.08:681,46,0	1/1:1,16:18:45.07:529,45,0	1/1:4,15:19:43.40:532,43,0	1/1:3,19:22:54.13:657,54,0	1/1:4,24:28:72.13:853,72,0	1/1:3,19:23:48.05:584,48,0	1/1:2,17:19:42.59:543,43,0	1/1:3,20:23:60.15:729,60,0	1/1:6,10:16:30.06:364,30,0	1/1:5,23:29:66.11:784,66,0	0/0:1,0:22:23.67:0,24,55	1/1:1,30:31:75.21:912,75,0	1/1:2,12:15:32.94:363,33,0	1/1:7,13:20:39.92:455,40,0	1/1:3,27:30:78.18:949,78,0	1/1:1,11:12:26.97:309,27,0	1/1:4,18:22:44.93:526,45,0	1/1:6,20:26:48.83:552,49,0	1/1:1,11:14:38.87:416,39,0	1/1:3,14:17:24.01:292,24,0	1/1:6,25:33:67.36:803,67,0	1/1:1,24:25:66.18:802,66,0	1/1:1,17:20:57.03:656,57,0
chr10	47637838	.	G	GAAAC	559.54	PASS	AB=0.948;AC=11;AF=0.212;AN=52;BaseQRankSum=-1.309;DP=436;FS=18.537;HRun=0;HaplotypeScore=167.7949;InbreedingCoeff=-0.0376;MQ=40.49;MQ0=19;MQRankSum=-1.713;QD=3.04;ReadPosRankSum=-0.623;VQSLOD=1.5988;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:35:38.58:0,39,693	0/0:8,0:8:12.30:0,12,178	0/0:2,0:1:3:0,3,28	./.	./.	0/0:11,0:10:8.78:0,9,113	0/0:13,0:12:26.95:0,27,316	0/0:25,0:24:56.91:0,57,831	0/1:11,3:14:90.49:178,0,90	0/0:14,0:12:32.85:0,33,421	0/1:16,0:15:0.03:0,0,0	0/1:19,0:18:99:197,0,155	0/1:9,1:9:92.81:93,0,204	0/1:18,0:18:2.29:2,0,133	0/0:17,0:16:11.69:0,12,134	0/0:18,0:17:11.02:0,11,247	0/1:25,0:25:7.06:7,0,422	0/1:16,0:15:15.34:15,0,203	0/0:19,0:19:40.74:0,41,469	0/0:9,0:9:5.61:0,6,65	0/0:22,0:21:6.42:0,6,77	1/1:16,0:15:7.45:34,7,0	0/0:6,1:5:2.82:0,3,16	0/1:35,5:38:99:144,0,277	0/1:9,1:8:10.82:21,0,11	0/0:20,0:19:34.27:0,34,464	0/0:10,0:10:3.01:0,3,39	0/0:10,0:7:6.54:0,7,159
chr10	47637852	.	GAC	G	2106.35	PASS	AB=1.000;AC=31;AF=0.574;AN=54;BaseQRankSum=5.652;DP=464;FS=15.820;HRun=0;HaplotypeScore=151.2748;InbreedingCoeff=0.0092;MQ=41.22;MQ0=15;MQRankSum=6.384;QD=5.65;ReadPosRankSum=2.246;VQSLOD=2.2524;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:35,0:32:37.32:262,0,37	0/1:7,0:7:7.04:62,0,7	1/1:8,0:2:4.07:12,4,0	0/0:12,0:4:2.06:0,2,31	./.	0/1:7,0:6:0.02:0,0,0	0/1:11,0:11:60.97:77,0,61	0/0:35,0:34:73.41:0,73,529	1/1:17,0:17:14.19:152,14,0	0/1:19,0:16:41.94:174,0,42	1/1:21,0:20:2.92:17,3,0	1/1:15,0:14:20.82:158,21,0	1/1:11,0:10:11.82:168,12,0	0/1:17,0:17:2.86:3,0,113	0/1:17,0:16:0.54:41,0,1	1/1:14,0:14:15.64:149,16,0	0/1:24,0:24:35.37:181,0,35	0/1:15,0:14:27.96:108,0,28	0/1:25,0:25:56.78:57,0,94	0/1:7,0:7:0:0,0,0	0/1:24,0:23:17.88:92,0,18	0/0:18,0:17:0:0,0,0	0/0:6,0:6:2.92:0,3,17	0/1:39,0:37:3.22:129,0,3	1/1:12,0:10:12.05:84,12,0	1/1:21,0:20:5.42:243,5,0	0/0:5,5:10:2.96:0,3,19	1/1:7,0:6:11.90:85,12,0
chr10	47637858	.	AACAGAGACAGAG	A	13165.86	PASS	AB=1.000;AC=47;AF=0.839;AN=56;BaseQRankSum=-3.289;DP=450;FS=14.311;HRun=0;HaplotypeScore=158.8494;InbreedingCoeff=0.7182;MQ=46.96;MQ0=10;MQRankSum=2.371;QD=35.68;ReadPosRankSum=1.691;VQSLOD=3.6482;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:27:73.09:1645,73,0	1/1:9,0:9:17.24:491,17,0	0/0:12,0:4:10.58:0,11,197	0/0:24,0:13:36.86:0,37,691	1/1:0,9:9:11.89:82,12,0	1/1:7,0:6:9.32:58,9,0	1/1:12,0:12:21:500,21,0	0/0:40,0:39:99:0,100,1267	1/1:14,0:14:34.25:626,34,0	1/1:18,0:15:45.07:1184,45,0	1/1:2,19:20:26.63:229,27,0	1/1:13,0:13:24.85:652,25,0	1/1:10,0:10:27.09:737,27,0	0/1:11,0:11:4.96:5,0,137	1/1:17,0:16:23.02:348,23,0	1/1:14,0:14:26.41:652,26,0	1/1:21,0:21:39.43:1007,39,0	1/1:12,0:12:4.77:500,5,0	1/1:7,20:27:63.05:940,63,0	1/1:1,6:7:5.83:42,6,0	1/1:23,0:22:38.57:575,39,0	1/1:2,18:19:26.82:177,27,0	0/0:0,5:5:0.47:0,0,1	1/1:31,0:30:32.01:673,32,0	1/1:10,0:8:15.48:409,15,0	1/1:3,18:20:54.10:1278,54,0	1/1:10,0:10:6.02:101,6,0	1/1:4,0:3:9.03:258,9,0
chr10	47638070	.	CT	C	2310.82	PASS	AB=0.775;AC=32;AF=0.571;AN=56;BaseQRankSum=3.906;DP=521;FS=5.007;HRun=14;HaplotypeScore=71.3600;InbreedingCoeff=0.4403;MQ=70.04;MQ0=2;MQRankSum=3.325;QD=6.44;ReadPosRankSum=5.616;VQSLOD=2.5784;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,3:35:36.33:0,36,533	1/1:4,5:9:14.84:103,15,0	0/0:11,0:9:14.96:0,15,119	0/1:15,1:14:12.88:21,0,13	0/1:9,15:24:8.21:240,0,8	1/1:6,8:20:20.40:212,20,0	1/1:2,14:18:17.86:251,18,0	0/0:34,1:36:27.42:0,27,375	0/0:18,0:18:41.86:0,42,358	0/1:13,12:27:10.49:160,0,10	1/1:10,7:17:21.16:144,21,0	0/1:22,2:25:3.14:3,0,242	0/0:6,0:6:5.96:0,6,48	0/1:15,1:16:5.53:6,0,117	1/1:9,10:21:23.89:141,24,0	0/0:18,0:18:35.02:0,35,323	1/1:7,20:28:46.53:314,47,0	1/1:3,11:15:25.72:170,26,0	1/1:7,6:14:24.62:145,25,0	1/1:5,3:10:12.49:72,12,0	1/1:9,6:15:8.65:61,9,0	0/0:23,0:23:40.10:0,40,324	0/0:12,1:12:7.23:0,7,183	0/1:14,5:21:14.30:14,0,155	0/1:6,7:13:29.88:103,0,30	1/1:10,9:21:27.68:176,28,0	1/1:4,12:16:17.73:123,18,0	0/1:6,3:9:8.37:50,0,8
chr10	47639463	.	CTT	C	3967.98	PASS	AB=0.598;AC=37;AF=0.661;AN=56;BaseQRankSum=-5.553;DP=513;FS=0.988;HRun=14;HaplotypeScore=71.7175;InbreedingCoeff=0.3721;MQ=69.37;MQ0=5;MQRankSum=-0.898;QD=10.12;ReadPosRankSum=4.461;VQSLOD=2.1214;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:11,3:48:25.87:26,0,124	1/1:3,1:4:2.96:28,3,0	0/0:34,0:20:24.45:0,24,244	0/0:10,0:5:6.18:0,6,56	1/1:3,9:12:14.86:186,15,0	1/1:4,11:17:23.42:190,23,0	1/1:1,10:14:26.46:210,26,0	0/0:22,0:24:47.52:0,48,527	0/1:10,3:19:15.74:64,0,16	1/1:7,10:17:29.79:256,30,0	1/1:1,5:6:5.93:55,6,0	0/0:9,0:20:1.76:0,2,29	0/1:3,1:17:7.29:7,0,40	0/0:19,0:20:25.44:0,25,335	1/1:6,17:25:38.36:376,38,0	0/1:8,3:20:39.81:54,0,40	1/1:5,21:27:53.70:484,54,0	1/1:7,17:25:47.72:428,48,0	1/1:7,12:18:33.01:301,33,0	1/1:1,8:8:20.94:186,21,0	0/1:8,9:20:1.75:170,0,2	0/0:1,1:12:3.50:0,4,38	0/1:4,1:12:14.28:14,0,36	0/1:3,1:18:8.92:9,0,56	1/1:4,7:11:20.84:185,21,0	1/1:6,6:12:14.91:139,15,0	1/1:5,11:19:38.20:313,38,0	1/1:7,9:19:35.19:285,35,0
chr10	47639690	.	T	TAATAAATAAATA	1891.16	PASS	AB=1.000;AC=22;AF=0.550;AN=40;BaseQRankSum=-2.400;DP=231;FS=4.722;HRun=0;HaplotypeScore=61.2625;InbreedingCoeff=0.4484;MQ=32.32;MQ0=44;MQRankSum=-4.085;QD=12.52;ReadPosRankSum=-2.283;VQSLOD=0.6396;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:8,0:6:3.86:4,0,25	0/0:4,0:3:3.01:0,3,42	./.	./.	1/1:5,0:10:9.03:173,9,0	0/0:10,0:8:14.74:0,15,444	0/0:2,0:2:2.97:0,3,20	1/1:42,0:27:20.89:184,21,0	0/0:3,0:7:3.01:0,3,84	1/1:6,0:6:6.02:143,6,0	1/1:6,0:5:3.01:71,3,0	0/0:4,0:6:5.91:0,6,39	0/0:2,0:3:3.01:0,3,40	./.	0/0:6,0:5:9.03:0,9,249	1/1:7,0:7:6.02:124,6,0	1/1:7,1:11:9.03:413,9,0	1/1:15,0:7:3.01:162,3,0	./.	./.	./.	./.	./.	0/0:5,0:3:2.34:0,2,83	1/1:7,0:10:6.02:153,6,0	1/1:5,0:7:3.01:76,3,0	0/1:8,0:10:5.57:6,0,49	1/1:4,5:8:9.03:521,9,0
chr10	47639732	.	A	ATAAATAAATAAG	1288.86	PASS	AB=0.954;AC=10;AF=0.179;AN=56;BaseQRankSum=-1.045;DP=250;FS=7.244;HRun=0;HaplotypeScore=91.0701;InbreedingCoeff=-0.2461;MQ=61.09;MQ0=5;MQRankSum=-6.004;QD=9.99;ReadPosRankSum=1.797;VQSLOD=1.0683;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:7:8.06:0,8,132	0/0:3,0:3:8.99:0,9,89	0/0:7,0:7:8.19:0,8,118	0/0:4,0:4:12.03:0,12,134	0/1:8,0:8:62.92:93,0,63	0/0:13,0:13:32.76:0,33,662	0/0:6,0:6:12.02:0,12,122	0/1:38,0:34:67.64:68,0,593	0/0:6,0:6:9:0,9,144	0/1:5,0:5:71.91:78,0,72	0/1:7,0:7:23.08:23,0,145	0/0:4,0:4:11.95:0,12,124	0/0:8,0:8:17.95:0,18,181	0/0:5,0:5:15.01:0,15,138	0/0:6,0:6:18.04:0,18,369	0/1:9,0:9:60.26:60,0,109	0/1:17,0:14:96.87:345,0,97	0/1:2,6:12:20.97:178,0,21	0/0:13,0:10:20.91:0,21,193	0/0:7,0:7:20.75:0,21,174	0/0:4,0:4:9:0,9,78	0/0:6,0:6:18:0,18,161	0/0:4,0:4:12:0,12,106	0/0:10,0:10:29.88:0,30,313	0/1:13,0:13:99:101,0,237	0/1:9,0:9:47.30:47,0,147	0/0:8,0:8:6.44:0,6,151	0/1:10,0:10:99:439,0,129
chr10	47641422	.	TCTCTCTCTCTCTC	T	1537.80	PASS	AB=0.830;AC=5;AF=0.093;AN=54;BaseQRankSum=6.297;DP=439;FS=15.285;HRun=0;HaplotypeScore=144.5437;InbreedingCoeff=-0.0080;MQ=46.17;MQ0=32;MQRankSum=-5.216;QD=21.07;ReadPosRankSum=-0.655;VQSLOD=1.7802;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:65.93:0,66,2906	0/0:4,0:4:12.04:0,12,605	0/0:34,0:5:12.01:0,12,120	0/0:33,0:3:9.02:0,9,104	0/0:13,0:13:11.32:0,11,289	0/1:15,0:14:11.04:11,0,520	0/0:14,0:14:15.04:0,15,748	0/0:23,0:22:53.94:0,54,1003	0/0:12,0:11:13.72:0,14,422	0/0:13,0:13:39.13:0,39,1930	0/0:7,0:6:5.98:0,6,263	0/0:15,0:15:29.64:0,30,1057	0/0:19,0:19:37.27:0,37,845	0/0:21,0:21:10.89:0,11,1021	0/0:9,0:9:12.04:0,12,570	0/0:16,0:16:13.82:0,14,68	0/0:16,0:15:32.67:0,33,852	0/0:11,0:11:14.40:0,14,582	0/1:9,3:11:93.52:260,0,94	0/1:6,2:6:45.64:149,0,46	0/1:15,2:15:66.76:67,0,88	./.	0/0:15,0:15:14.44:0,14,254	0/0:15,0:13:5.62:0,6,617	0/0:16,0:16:8.26:0,8,403	0/0:14,0:14:39.17:0,39,1478	0/1:10,10:21:2.44:1166,0,2	0/0:14,0:11:26.06:0,26,740
chr10	47642130	.	GACAGACAGACAGACACACACAC	G	2770.75	PASS	AB=0.579;AC=13;AF=0.241;AN=54;BaseQRankSum=-0.961;DP=529;FS=37.943;HRun=0;HaplotypeScore=276.4680;InbreedingCoeff=0.9017;MQ=55.24;MQ0=13;MQRankSum=2.198;QD=29.79;ReadPosRankSum=1.877;VQSLOD=1.2037;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:19:35.18:0,35,1118	0/0:5,0:5:6.01:0,6,79	0/0:21,0:12:26.18:0,26,476	0/0:19,0:9:25.65:0,26,379	./.	0/0:16,0:14:18.06:0,18,424	0/0:29,0:27:29.49:0,29,787	0/0:17,0:17:51.10:0,51,1005	0/0:24,0:24:54.17:0,54,2047	1/1:14,0:13:23.01:423,23,0	0/1:3,0:11:0.05:0,0,0	0/0:40,0:39:86.61:0,87,4660	0/0:21,0:20:46.03:0,46,1981	0/0:35,0:34:72.17:0,72,2946	0/0:22,0:22:15.05:0,15,770	0/0:20,0:19:48.11:0,48,2294	1/1:15,0:15:29.88:448,30,0	1/1:18,1:19:44.95:830,45,0	0/0:9,0:9:24.08:0,24,1063	0/0:4,0:4:9.03:0,9,515	0/0:54,0:53:95.86:0,96,4537	0/0:8,0:7:15.05:0,15,798	0/0:11,0:10:24.07:0,24,860	0/0:40,0:38:93.14:0,93,4106	1/1:8,0:8:15.05:310,15,0	1/1:2,21:22:47.98:809,48,0	0/0:12,0:12:27.09:0,27,1376	1/1:3,0:2:6.02:128,6,0
chr10	47642132	.	CAGACAGACAG	C	2878.25	PASS	AB=1.000;AC=13;AF=0.241;AN=54;BaseQRankSum=-1.687;DP=539;FS=51.435;HRun=0;HaplotypeScore=184.2903;InbreedingCoeff=0.9016;MQ=54.51;MQ0=15;MQRankSum=2.068;QD=30.95;ReadPosRankSum=1.403;VQSLOD=1.0298;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:18:35.62:0,36,791	0/0:5,0:5:6.01:0,6,79	0/0:21,0:12:26.18:0,26,476	0/0:19,0:9:25.65:0,26,379	./.	0/0:18,0:16:21.07:0,21,456	0/0:28,0:26:29.26:0,29,699	0/0:19,0:19:51.06:0,51,889	0/0:22,0:21:33.85:0,34,1278	1/1:3,11:13:22.53:422,23,0	0/1:10,0:10:0:0,0,0	0/0:38,0:37:86.92:0,87,2855	0/0:23,0:22:49.12:0,49,1274	0/0:38,0:37:73.03:0,73,1837	0/0:22,0:22:15.05:0,15,493	0/0:22,0:21:44.95:0,45,1184	1/1:16,0:16:28.46:556,28,0	1/1:18,0:18:43.48:870,43,0	0/0:9,0:9:21.07:0,21,683	0/0:4,0:4:9.03:0,9,328	0/0:56,0:55:98.75:0,99,2870	0/0:9,0:7:15.05:0,15,539	0/0:11,0:10:24.07:0,24,643	0/0:42,0:39:96.15:0,96,2878	1/1:8,0:8:15.05:311,15,0	1/1:24,0:23:38.98:769,39,0	0/0:11,0:11:20.42:0,20,682	1/1:3,0:2:6.02:128,6,0
chr10	47642142	.	GAC	G	606.08	PASS	AB=0.906;AC=16;AF=0.444;AN=36;BaseQRankSum=1.099;DP=545;FS=0.000;HRun=0;HaplotypeScore=137.5133;InbreedingCoeff=0.0699;MQ=49.14;MQ0=23;MQRankSum=0.701;QD=2.12;ReadPosRankSum=1.452;VQSLOD=2.4692;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:15,3:15:4.97:0,5,20	./.	./.	./.	./.	0/0:21,0:18:2.31:0,2,9	0/1:27,2:27:0:0,0,0	./.	1/1:17,6:20:12.03:127,12,0	./.	./.	0/1:32,6:37:3.49:199,0,3	0/1:15,2:22:13.36:49,0,13	0/1:31,1:33:14.33:14,0,16	0/0:22,0:22:8.27:0,8,46	0/1:14,2:18:0.24:66,0,0	0/0:23,0:23:8.74:0,9,43	0/1:16,0:16:5.22:5,0,15	0/1:13,0:13:22.85:23,0,46	0/0:4,0:4:2.99:0,3,23	0/0:55,2:54:2.91:0,3,193	./.	1/1:9,1:9:3.01:32,3,0	1/1:32,8:38:11.96:169,12,0	./.	0/1:30,0:29:9.23:9,0,17	1/1:9,1:10:2.84:31,3,0	./.
chr10	47642144	.	C	CAGACAG	6888.17	PASS	AB=0.981;AC=33;AF=0.611;AN=54;BaseQRankSum=-9.277;DP=550;FS=0.508;HRun=0;HaplotypeScore=161.0031;InbreedingCoeff=0.5104;MQ=47.71;MQ0=23;MQRankSum=2.435;QD=16.48;ReadPosRankSum=2.509;VQSLOD=4.4141;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:18,0:16:4.10:40,0,4	1/1:5,0:5:3.01:37,3,0	0/0:10,0:4:5.97:0,6,59	0/1:15,0:7:27.47:27,0,148	./.	1/1:17,1:17:9.96:199,10,0	1/1:30,0:28:20.52:333,21,0	1/1:24,0:21:18.57:279,19,0	1/1:21,0:20:44.66:594,45,0	0/0:17,0:16:11.88:0,12,186	0/0:10,0:10:0:0,0,0	1/1:39,0:39:51.85:1002,52,0	0/1:21,0:21:17.59:417,0,18	0/1:33,0:32:3.62:508,0,4	1/1:3,18:22:9.02:207,9,0	0/1:19,0:18:30.37:30,0,93	0/0:23,0:23:37.39:0,37,463	0/0:19,0:19:43.79:0,44,606	1/1:8,0:14:16.30:238,16,0	1/1:4,0:4:6.02:90,6,0	1/1:55,0:55:22.16:1029,22,0	1/1:9,0:8:9.03:144,9,0	1/1:10,0:9:21.07:327,21,0	1/1:40,0:37:75.69:1119,76,0	0/0:11,0:10:14.88:0,15,195	0/0:30,0:29:25.50:0,26,436	1/1:9,0:9:24.01:268,24,0	0/0:4,0:3:6.02:0,6,92
chr10	47644092	.	G	GA	16636.66	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=-17.375;DP=751;FS=19.848;HRun=1;HaplotypeScore=63.0715;InbreedingCoeff=0.9998;MQ=81.81;MQ0=0;MQRankSum=-4.637;QD=40.48;ReadPosRankSum=1.369;VQSLOD=2.9315;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:63,0:63:99:0,187,2385	1/1:1,14:15:39.13:584,39,0	0/0:19,0:19:54.14:0,54,664	0/0:19,0:19:51.15:0,51,645	1/1:3,27:30:78.17:1109,78,0	1/1:1,14:15:33.11:493,33,0	1/1:1,32:34:81.27:1213,81,0	0/0:27,0:27:78.25:0,78,1001	0/0:25,0:25:75.24:0,75,973	1/1:1,24:25:75.25:1116,75,0	1/1:0,19:19:54.18:808,54,0	0/0:35,0:35:99:0,105,1319	0/0:21,0:21:60.18:0,60,765	0/0:23,0:23:63.19:0,63,797	1/1:1,35:36:96.33:1438,96,0	0/0:30,0:30:90.29:0,90,1166	1/1:0,37:37:99:1618,108,0	1/1:1,22:23:60.20:899,60,0	1/1:1,23:24:69.20:984,69,0	1/1:1,28:29:78.22:1143,78,0	1/1:1,37:38:99:1618,108,0	0/0:33,0:33:99:0,99,1271	0/0:22,0:22:66.21:0,66,857	0/0:23,0:23:69.21:0,69,879	1/1:0,19:19:54.18:809,54,0	1/1:2,27:29:84.22:1231,84,0	1/1:0,28:28:78.26:1168,78,0	1/1:0,9:9:27.09:405,27,0
chr10	47645404	.	CG	C	20346.76	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-2.995;DP=650;FS=2.252;HRun=3;HaplotypeScore=70.6829;InbreedingCoeff=0.9989;MQ=80.08;MQ0=0;MQRankSum=-9.928;QD=33.30;ReadPosRankSum=6.591;VQSLOD=4.7885;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,29:30:81.25:1002,81,0	1/1:1,14:15:39.12:481,39,0	0/0:15,0:15:42.01:0,42,515	0/0:24,0:24:61.86:0,62,778	1/1:0,25:25:66.04:793,66,0	1/1:0,22:22:63.20:779,63,0	1/1:1,23:24:63.20:780,63,0	1/1:3,19:22:57.18:699,57,0	1/1:0,25:25:66.21:817,66,0	1/1:2,16:18:38.99:455,39,0	1/1:1,9:10:27.08:334,27,0	1/1:1,22:23:57.18:701,57,0	1/1:2,19:21:54.17:668,54,0	1/1:1,20:21:51.16:631,51,0	1/1:0,36:36:96.30:1189,96,0	1/1:1,17:18:51.16:631,51,0	1/1:0,27:27:75.19:909,75,0	1/1:0,33:33:99:1209,99,0	1/1:0,18:18:51.16:627,51,0	1/1:2,17:19:48.15:592,48,0	1/1:4,43:47:99:1485,120,0	1/1:0,25:25:75.24:925,75,0	1/1:0,11:11:27.08:333,27,0	1/1:1,33:34:99:1226,99,0	1/1:0,17:17:51.16:632,51,0	1/1:1,21:22:63.20:780,63,0	1/1:1,23:24:69.22:853,69,0	1/1:2,22:24:66.21:817,66,0
chr10	47646300	.	AG	A	2496.95	PASS	AB=0.697;AC=28;AF=0.500;AN=56;BaseQRankSum=-0.733;DP=347;FS=14.434;HRun=11;HaplotypeScore=53.1710;InbreedingCoeff=0.6507;MQ=83.72;MQ0=0;MQRankSum=-0.601;QD=13.87;ReadPosRankSum=4.259;VQSLOD=2.1386;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:18:13.16:0,13,82	1/1:2,2:4:5.99:49,6,0	0/0:20,0:20:17.17:0,17,208	0/0:15,0:13:6.19:0,6,84	1/1:0,4:5:14.02:104,14,0	0/0:15,0:15:24.02:0,24,233	0/0:13,0:15:29.91:0,30,302	0/0:7,0:7:3.01:0,3,32	0/0:4,0:9:2.84:0,3,14	1/1:4,4:8:11.96:95,12,0	1/1:3,0:3:2.98:22,3,0	0/0:11,0:21:6.88:0,7,31	0/0:3,0:8:2.71:0,3,14	1/1:5,8:13:23.91:197,24,0	1/1:4,10:14:32.94:271,33,0	0/0:4,0:9:20.22:0,20,135	1/1:3,17:23:62.08:466,62,0	1/1:10,24:36:69.95:553,70,0	0/1:7,6:14:9.94:113,0,10	1/1:1,1:2:5.99:48,6,0	1/1:2,10:13:26:203,26,0	0/0:3,0:3:2.99:0,3,24	0/0:2,0:2:3.01:0,3,32	0/0:10,0:25:20.34:0,20,130	1/1:3,4:7:11.98:99,12,0	1/1:2,10:13:25.99:202,26,0	0/1:10,6:16:10.93:126,0,11	1/1:1,8:9:17.98:148,18,0
chr10	47646414	.	A	ACTG	8894.42	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=-9.753;DP=497;FS=0.434;HRun=0;HaplotypeScore=77.8754;InbreedingCoeff=0.9031;MQ=75.46;MQ0=0;MQRankSum=-2.166;QD=32.46;ReadPosRankSum=-0.009;VQSLOD=4.7872;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:69.67:0,70,957	1/1:2,1:3:6.02:113,6,0	0/0:15,0:16:21.07:0,21,298	0/0:24,0:24:47.85:0,48,672	1/1:4,6:10:12.04:246,12,0	1/1:7,5:12:12.04:245,12,0	1/1:14,24:40:26.31:1304,26,0	0/0:14,0:14:24.08:0,24,341	0/0:9,0:9:21.07:0,21,304	1/1:10,3:13:9.03:184,9,0	1/1:4,0:4:3.01:47,3,0	0/0:22,0:22:54.18:0,54,777	0/0:16,0:16:42.14:0,42,607	0/0:24,0:24:57.17:0,57,798	1/1:4,12:16:29.93:614,30,0	0/0:11,0:11:30.10:0,30,430	1/1:5,15:20:45.15:914,45,0	1/1:12,19:31:66.23:1351,66,0	1/1:15,9:25:36.02:689,36,0	1/1:4,4:8:8.82:184,9,0	1/1:15,25:40:59.88:1221,60,0	0/0:4,0:4:3:0,3,25	0/0:10,0:10:12.04:0,12,170	0/0:41,0:41:99:0,105,1481	1/1:4,11:15:24.08:490,24,0	1/1:7,8:15:25.33:494,25,0	1/1:3,11:13:24.08:491,24,0	1/1:1,6:7:15.05:307,15,0
chr10	47650618	.	T	TTGGTGTTGGTGC	6702.58	PASS	AB=0.972;AC=32;AF=0.571;AN=56;BaseQRankSum=2.442;DP=690;FS=0.396;HRun=0;HaplotypeScore=217.6053;InbreedingCoeff=-0.1897;MQ=62.68;MQ0=3;MQRankSum=-7.278;QD=12.55;ReadPosRankSum=4.773;VQSLOD=3.4109;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:40,0:40:92.55:1026,93,0	0/1:8,0:8:40.98:70,0,41	0/0:42,0:33:51.13:0,51,789	0/0:38,0:33:47.58:0,48,620	0/0:16,0:15:4.37:0,4,159	0/1:18,0:18:99:233,0,146	0/1:41,0:41:62.28:62,0,221	0/1:25,0:24:81.77:387,0,82	1/1:1,18:24:9.03:454,9,0	0/1:26,0:26:99:242,0,181	0/1:11,0:11:5.08:5,0,76	1/1:4,23:31:8.96:528,9,0	1/1:0,22:26:7.27:277,7,0	0/1:7,0:33:37.74:561,0,38	0/1:26,0:26:76.76:295,0,77	1/1:22,0:22:62.67:565,63,0	0/1:17,0:17:53.15:53,0,61	0/1:20,0:20:88.02:88,0,96	0/1:19,0:19:19.26:280,0,19	0/1:9,0:9:7.04:126,0,7	0/0:58,0:58:29.01:0,29,271	1/1:0,7:13:14.89:216,15,0	1/1:11,0:11:25.10:176,25,0	1/1:8,27:43:9.85:256,10,0	0/1:23,0:23:99:116,0,194	0/1:24,0:24:99:375,0,148	0/1:19,0:19:53.16:252,0,53	0/1:5,0:5:58.51:59,0,118
chr10	47650636	.	C	CTGGTGG	10243.14	PASS	AB=0.920;AC=38;AF=0.679;AN=56;BaseQRankSum=2.629;DP=619;FS=0.501;HRun=0;HaplotypeScore=133.2917;InbreedingCoeff=0.1881;MQ=66.29;MQ0=2;MQRankSum=-5.092;QD=19.70;ReadPosRankSum=5.330;VQSLOD=3.8776;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:35,0:35:94.66:95,0,106	1/1:2,6:10:12.04:373,12,0	0/0:27,0:23:22.73:0,23,624	0/0:27,0:22:35.24:0,35,487	1/1:5,9:13:8.94:76,9,0	1/1:3,12:17:18.06:541,18,0	1/1:10,29:42:21.03:534,21,0	0/0:28,0:27:6.77:0,7,255	0/1:18,0:18:78.93:155,0,79	1/1:3,20:23:56.85:1137,57,0	1/1:5,6:13:8.99:104,9,0	0/1:24,0:24:99:131,0,161	0/1:17,0:17:54.95:90,0,55	0/1:38,0:38:99:992,0,136	1/1:4,20:24:33.11:1076,33,0	0/0:17,0:17:5.86:0,6,50	1/1:5,12:17:14.98:355,15,0	1/1:2,14:19:15.05:426,15,0	1/1:4,20:25:66.02:1100,66,0	1/1:1,9:10:23.99:340,24,0	0/1:7,47:60:0:0,0,0	0/1:9,0:9:30.03:108,0,30	0/1:9,0:9:7.18:7,0,21	0/1:29,0:29:49.18:49,0,92	1/1:1,14:18:14.89:390,15,0	1/1:6,17:26:57.11:1061,57,0	1/1:1,17:19:27.09:905,27,0	0/1:2,2:4:51.84:197,0,52
chr10	47652431	.	ACATATGTGTATGTTTCCCTG	A	10023.10	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=12.492;DP=682;FS=1.034;HRun=0;HaplotypeScore=385.5716;InbreedingCoeff=0.9937;MQ=73.14;MQ0=0;MQRankSum=-12.340;QD=110.14;ReadPosRankSum=3.129;VQSLOD=3.7606;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:64,0:64:99:0,193,15778	1/1:1,7:8:15.05:735,15,0	0/0:15,0:15:36.10:0,36,1855	0/0:10,0:10:23.57:0,24,1322	0/0:32,0:32:90.31:0,90,6610	1/1:1,24:25:54.19:3058,54,0	1/1:2,24:26:42.14:2276,42,0	0/0:35,0:35:99:0,99,7521	0/0:30,0:30:87.28:0,87,7269	0/0:38,0:38:99:0,111,9151	0/0:16,0:16:48.16:0,48,4512	0/0:27,0:27:81.28:0,81,6781	0/0:25,0:25:75.26:0,75,6458	0/0:26,0:26:75.26:0,75,6402	1/1:0,32:32:72.25:3954,72,0	0/0:29,0:29:87.29:0,87,7556	0/0:22,0:22:63.22:0,63,5466	0/0:17,0:17:48.16:0,48,4087	0/0:20,0:20:60.21:0,60,3877	0/0:32,0:32:96.33:0,96,8062	0/0:25,0:25:72.25:0,72,5905	0/0:14,0:14:42.14:0,42,3079	0/0:7,0:7:21.07:0,21,1849	0/0:25,0:25:75.26:0,75,6778	0/0:21,0:21:63.22:0,63,5731	0/0:27,0:27:72.25:0,72,6291	0/0:20,0:20:57.20:0,57,4574	0/0:14,0:14:42.14:0,42,3256
chr10	47654942	.	AAG	A	5289.26	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=10.178;DP=519;FS=2.247;HRun=0;HaplotypeScore=64.4018;InbreedingCoeff=0.9623;MQ=85.12;MQ0=2;MQRankSum=-2.194;QD=36.48;ReadPosRankSum=2.371;VQSLOD=7.1525;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:84.27:0,84,1470	0/0:7,0:7:21.07:0,21,378	0/0:11,0:11:29.31:0,29,455	0/0:21,0:21:57.17:0,57,952	1/1:0,17:16:48.16:672,48,0	0/0:12,0:12:36.12:0,36,638	0/0:25,0:25:57.18:0,57,997	0/0:21,0:21:57.19:0,57,961	0/0:11,0:11:30.10:0,30,524	1/1:3,15:18:48.16:672,48,0	1/1:0,8:8:18.06:252,18,0	0/0:27,0:27:81.25:0,81,1422	0/0:15,0:15:42.14:0,42,750	0/0:23,0:23:69.22:0,69,1213	0/0:16,0:16:48.16:0,48,864	0/0:9,0:9:27.09:0,27,485	1/1:0,30:30:78.26:1092,78,0	1/1:1,33:34:84.28:1176,84,0	0/0:20,0:20:57.12:0,57,916	0/0:5,0:5:15.05:0,15,269	0/0:61,0:61:99:0,172,3079	0/0:8,0:8:24.08:0,24,432	0/0:5,0:5:15.05:0,15,270	0/0:36,0:36:99:0,99,1757	1/1:0,13:13:33.11:461,33,0	1/1:1,23:23:66.22:921,66,0	0/0:11,0:11:33.11:0,33,593	1/1:0,1:1:3.01:42,3,0
chr10	47655463	.	C	CT	7580.41	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-4.505;DP=662;FS=1.427;HRun=1;HaplotypeScore=66.1190;InbreedingCoeff=0.9996;MQ=75.83;MQ0=0;MQRankSum=-4.021;QD=39.28;ReadPosRankSum=1.915;VQSLOD=5.5756;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,24:27:36.85:828,37,0	0/0:15,0:15:45.12:0,45,555	0/0:15,0:15:45.14:0,45,571	0/0:9,0:9:24.06:0,24,295	0/0:26,0:25:75.23:0,75,958	0/0:27,0:27:81.25:0,81,1036	0/0:23,0:23:63.19:0,63,804	0/0:42,0:42:99:0,123,1563	1/1:2,19:21:54.18:809,54,0	0/0:22,0:22:63.20:0,63,807	0/0:23,0:23:66.19:0,66,840	1/1:1,31:32:87.29:1304,87,0	1/1:0,34:34:87.25:1304,87,0	1/1:0,27:27:75.25:1123,75,0	0/0:36,0:36:99:0,108,1402	0/0:31,0:31:90.29:0,90,1168	0/0:33,0:32:96.27:0,96,1203	0/0:15,0:15:45.15:0,45,583	0/0:18,0:18:51.15:0,51,636	0/0:21,0:21:63.20:0,63,818	0/0:20,0:20:57.19:0,57,740	1/1:0,18:18:51.17:764,51,0	1/1:0,18:18:53.77:774,54,0	1/1:0,16:16:45.15:674,45,0	0/0:16,0:16:48.13:0,48,596	0/0:33,0:33:99:0,99,1286	0/0:30,0:29:90.23:0,90,1132	0/0:14,0:14:42.14:0,42,545
chr10	47656056	.	AAAAG	A	3689.14	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=9.427;DP=589;FS=8.712;HRun=0;HaplotypeScore=119.4920;InbreedingCoeff=0.9860;MQ=66.54;MQ0=3;MQRankSum=-2.718;QD=23.06;ReadPosRankSum=0.327;VQSLOD=2.5682;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:74.58:0,75,1512	0/0:15,0:15:42.06:0,42,487	0/0:15,0:6:11.89:0,12,115	0/0:19,0:15:23.15:0,23,202	1/1:25,1:26:51.10:667,51,0	0/0:31,0:31:75.21:0,75,976	0/0:22,0:22:60.09:0,60,715	0/0:29,0:29:57.10:0,57,691	0/0:20,0:20:57.18:0,57,1218	1/1:12,1:13:29.84:344,30,0	1/1:27,1:27:38.93:443,39,0	0/0:20,0:20:51.09:0,51,995	0/0:19,0:19:54.07:0,54,1041	0/0:17,0:17:45.12:0,45,600	0/0:24,0:24:57.09:0,57,677	0/0:26,0:26:63.17:0,63,1296	1/1:17,0:17:30.10:411,30,0	1/1:10,0:10:15.05:207,15,0	0/0:19,0:18:41.61:0,42,304	0/0:32,0:32:71.40:0,71,575	0/0:5,0:5:11.94:0,12,112	0/0:18,0:18:51.15:0,51,984	0/0:27,0:27:69.16:0,69,1342	0/0:16,0:16:45.12:0,45,914	1/1:17,3:20:33.07:453,33,0	1/1:23,0:23:63.05:771,63,0	0/0:28,0:26:75.11:0,75,585	1/1:22,1:23:30.05:393,30,0
chr10	47656064	.	GAAAGA	G	5440.30	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=1.371;DP=614;FS=14.229;HRun=0;HaplotypeScore=130.2112;InbreedingCoeff=0.9096;MQ=62.25;MQ0=4;MQRankSum=-2.555;QD=29.89;ReadPosRankSum=-1.517;VQSLOD=3.7862;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:34:98.43:0,98,2059	0/1:17,0:17:14.59:15,0,588	0/0:14,0:4:11.90:0,12,137	0/0:17,0:13:26.21:0,26,293	1/1:2,24:26:64.56:1035,65,0	0/0:28,0:28:75.23:0,75,1272	0/0:23,0:23:41.30:0,41,934	0/0:36,0:36:32.44:0,32,1013	0/0:20,0:20:60.19:0,60,1563	1/1:4,10:14:31.86:430,32,0	1/1:5,16:22:47.88:689,48,0	0/0:18,0:18:54.16:0,54,1254	0/0:20,0:20:56.91:0,57,1272	0/0:18,0:18:48.12:0,48,788	0/0:25,0:25:41.26:0,41,896	0/0:29,0:29:53.29:0,53,1666	1/1:4,16:21:30.04:614,30,0	1/1:2,9:11:16.56:336,17,0	0/0:18,0:17:38.27:0,38,445	0/0:31,0:31:67.57:0,68,870	0/0:6,0:6:17.90:0,18,184	0/0:17,0:17:51.15:0,51,1201	0/0:27,0:27:80.68:0,81,1727	0/0:18,0:18:51.10:0,51,1153	1/1:4,19:23:33.03:570,33,0	1/1:1,23:25:74.95:1216,75,0	0/0:32,0:29:59.26:0,59,855	1/1:4,18:22:30.04:537,30,0
chr10	47656067	.	AG	A	2182.94	PASS	AB=0.961;AC=20;AF=0.357;AN=56;BaseQRankSum=10.687;DP=603;FS=14.756;HRun=1;HaplotypeScore=94.4939;InbreedingCoeff=0.7145;MQ=62.23;MQ0=4;MQRankSum=-4.016;QD=8.53;ReadPosRankSum=-0.337;VQSLOD=-0.2733;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:74.16:0,74,839	0/0:18,0:18:26.45:0,26,115	0/0:15,0:5:7.44:0,7,71	0/1:16,1:11:0.07:0,0,93	1/1:25,0:25:60.21:424,60,0	0/1:30,0:30:2.02:2,0,112	0/0:24,0:24:3.66:0,4,43	0/1:32,2:34:97.89:98,0,100	0/0:21,0:21:59.94:0,60,623	1/1:13,0:13:25.28:219,25,0	1/1:19,0:18:44.41:301,44,0	0/0:19,0:19:47.80:0,48,465	0/0:21,0:21:31.06:0,31,506	0/0:18,0:18:14.89:0,15,123	0/1:21,1:22:23.63:24,0,80	0/0:26,0:26:69.25:0,69,678	1/1:19,0:19:31.47:239,31,0	1/1:10,0:10:19.50:144,19,0	0/0:20,0:19:37.35:0,37,227	0/0:31,0:31:76.94:0,77,394	0/0:7,0:7:17.30:0,17,100	0/0:17,0:17:50.93:0,51,492	0/0:27,0:27:74.25:0,74,774	0/0:17,0:17:45.11:0,45,476	1/1:22,0:22:32.81:248,33,0	1/1:25,0:25:55.55:462,56,0	0/0:32,0:29:62.61:0,63,342	1/1:20,0:20:29.81:223,30,0
chr10	47656068	.	GA	G	3628.73	PASS	AB=0.850;AC=38;AF=0.679;AN=56;BaseQRankSum=9.754;DP=608;FS=3.908;HRun=13;HaplotypeScore=90.6599;InbreedingCoeff=0.7411;MQ=62.21;MQ0=4;MQRankSum=-0.417;QD=8.50;ReadPosRankSum=1.392;VQSLOD=3.1406;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,1:34:52.12:0,52,624	1/1:2,15:18:37.81:268,38,0	0/0:14,0:5:2.94:0,3,18	0/1:14,2:11:10.33:10,0,31	1/1:25,0:25:51.62:249,52,0	1/1:6,25:31:36.41:430,36,0	1/1:2,21:24:55.70:400,56,0	1/1:9,23:34:39.08:448,39,0	0/0:20,1:21:29.16:0,29,439	1/1:12,0:13:15.89:62,16,0	1/1:19,0:19:10.61:135,11,0	0/0:16,2:20:0.10:0,0,332	0/0:20,0:21:34.72:0,35,397	1/1:4,14:18:9.58:233,10,0	1/1:3,18:22:52.73:378,53,0	0/0:24,1:27:27.95:0,28,557	1/1:19,0:19:26.23:105,26,0	1/1:10,0:10:14.89:75,15,0	1/1:5,0:20:27.83:90,28,0	1/1:3,0:31:42.72:123,43,0	1/1:2,0:7:8.13:23,8,0	0/0:16,0:17:29.88:0,30,273	0/0:24,1:26:41.03:0,41,543	0/1:14,3:17:20.65:21,0,305	1/1:22,0:22:23.20:92,23,0	1/1:26,0:26:57.59:273,58,0	1/1:9,1:29:41.62:133,42,0	1/1:20,0:20:18.92:79,19,0
chr10	47657274	.	AG	A	8506.91	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=4.190;DP=565;FS=0.000;HRun=7;HaplotypeScore=78.2118;InbreedingCoeff=0.9627;MQ=71.46;MQ0=0;MQRankSum=-1.870;QD=20.75;ReadPosRankSum=1.078;VQSLOD=4.2217;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,30:35:75.16:765,75,0	1/1:2,1:3:3:31,3,0	0/0:8,0:8:18.06:0,18,220	0/0:14,0:14:29.62:0,30,394	0/0:23,0:23:57.16:0,57,687	1/1:0,15:15:45.10:459,45,0	1/1:3,25:28:66.15:673,66,0	1/1:2,22:24:63.11:633,63,0	1/1:2,21:23:48.11:490,48,0	0/0:16,0:16:21.06:0,21,252	0/0:8,0:8:12.04:0,12,151	1/1:1,46:47:99:1254,123,0	1/1:2,24:26:65.51:671,66,0	1/1:4,23:27:66.13:666,66,0	1/1:5,26:31:69.15:702,69,0	1/1:2,19:21:60.11:603,60,0	0/0:23,0:23:54.11:0,54,646	0/0:14,0:14:39.12:0,39,489	1/1:1,0:12:13.77:47,14,0	1/1:3,0:11:16.30:47,16,0	1/1:5,0:34:48.89:143,49,0	1/1:3,13:16:39.09:396,39,0	1/1:1,10:11:27.06:275,27,0	1/1:1,18:19:48.11:490,48,0	0/0:15,0:15:42.12:0,42,517	0/0:22,0:22:54.14:0,54,644	1/1:1,0:27:55:162,55,0	0/0:12,0:12:33.06:0,33,374
chr10	47657281	.	GT	G	1637.40	PASS	AB=0.985;AC=21;AF=0.375;AN=56;BaseQRankSum=5.942;DP=557;FS=0.681;HRun=1;HaplotypeScore=94.8958;InbreedingCoeff=0.4193;MQ=73.57;MQ0=0;MQRankSum=-0.069;QD=4.68;ReadPosRankSum=4.463;VQSLOD=0.6503;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:35,0:35:21.35:184,21,0	0/1:2,0:2:0.60:1,0,19	0/0:7,0:7:17.97:0,18,195	0/0:17,0:17:38.18:0,38,441	0/0:21,0:21:53.90:0,54,628	0/1:17,0:17:7.10:58,0,7	0/1:29,0:29:35.51:125,0,36	0/1:29,0:29:32.18:32,0,147	1/1:22,0:22:20:139,20,0	0/0:13,0:13:26.99:0,27,300	0/0:4,0:4:12.04:0,12,153	1/1:50,0:50:10.30:275,10,0	0/1:28,1:29:10.07:164,0,10	0/1:26,2:28:2.97:173,0,3	0/1:30,1:31:11.06:159,0,11	1/1:20,1:21:27.59:174,28,0	0/0:17,0:17:48.11:0,48,596	0/0:13,0:13:39.13:0,39,501	0/0:11,0:11:22.77:0,23,89	0/1:11,0:11:3.28:3,0,28	0/0:33,0:33:63.53:0,64,253	1/1:15,0:15:33.01:164,33,0	0/1:12,0:12:7.97:54,0,8	1/1:19,0:19:19.25:124,19,0	0/0:14,0:14:39.10:0,39,488	0/0:19,0:19:54.05:0,54,649	0/0:27,0:27:19.09:0,19,111	0/0:11,0:11:33.09:0,33,409
chr10	47658630	.	TCTC	T	821.62	PASS	AB=0.978;AC=9;AF=0.167;AN=54;BaseQRankSum=7.016;DP=465;FS=14.657;HRun=0;HaplotypeScore=93.7348;InbreedingCoeff=0.4620;MQ=66.53;MQ0=2;MQRankSum=-5.432;QD=6.52;ReadPosRankSum=-0.722;VQSLOD=1.5202;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,0:21:13.25:85,13,0	0/0:3,0:3:4.26:0,4,54	0/0:19,0:10:5.50:0,6,47	0/0:16,0:14:2.79:0,3,39	0/1:16,0:15:1.72:2,0,144	0/0:16,0:15:18.02:0,18,240	0/0:14,0:14:2.06:0,2,58	0/0:23,0:24:8.24:0,8,135	0/0:12,0:12:14.96:0,15,165	0/0:19,0:19:11.65:0,12,85	0/0:13,0:13:2.97:0,3,20	0/0:20,0:20:30.10:0,30,515	0/0:11,0:11:23.77:0,24,421	1/1:8,21:29:42.11:563,42,0	0/0:16,0:16:24.08:0,24,414	1/1:32,0:32:47.21:293,47,0	0/0:14,0:13:5.95:0,6,63	./.	0/0:15,0:15:15.02:0,15,209	0/1:13,1:14:18.03:18,0,373	0/0:24,0:24:27.14:0,27,654	0/0:14,0:14:15.05:0,15,263	0/0:17,0:17:27.04:0,27,434	0/0:22,0:22:36.09:0,36,578	0/0:13,0:13:13.51:0,14,114	0/0:12,0:12:13.98:0,14,112	0/0:13,0:13:15.03:0,15,262	0/1:14,0:14:4.25:4,0,74
chr10	47658654	.	TCAC	T	4017.63	PASS	AB=1.000;AC=41;AF=0.759;AN=54;BaseQRankSum=-2.889;DP=361;FS=3.313;HRun=0;HaplotypeScore=84.6491;InbreedingCoeff=-0.0463;MQ=52.27;MQ0=9;MQRankSum=-3.185;QD=11.89;ReadPosRankSum=-2.140;VQSLOD=2.5917;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:23:68.61:80,0,69	1/1:6,0:6:14.62:96,15,0	1/1:13,0:2:2.98:21,3,0	0/1:9,0:4:16.42:16,0,17	1/1:10,5:15:35.72:467,36,0	1/1:14,0:13:31.49:284,31,0	1/1:3,9:12:6.79:40,7,0	0/1:18,0:18:38.44:76,0,38	0/0:5,0:7:5.36:0,5,50	1/1:8,3:11:27.12:368,27,0	1/1:1,6:7:8.92:91,9,0	1/1:15,0:15:29.56:218,30,0	0/1:8,0:11:27.10:83,0,27	1/1:21,0:21:33.86:254,34,0	0/1:9,0:9:18.89:104,0,19	1/1:31,0:31:47.50:328,48,0	1/1:10,1:10:16.91:129,17,0	./.	1/1:10,0:10:0.09:170,0,0	0/1:13,0:13:27.48:27,0,171	0/1:18,0:18:91.73:92,0,151	0/1:13,0:14:51.29:93,0,51	0/1:11,0:12:19.65:103,0,20	1/1:14,0:15:2.54:186,3,0	1/1:11,0:9:22.01:190,22,0	1/1:1,10:11:30.05:405,30,0	0/0:4,0:4:6.47:0,6,51	1/1:6,0:6:11.91:96,12,0
chr10	47658657	.	C	CCTT	1210.66	PASS	AB=0.972;AC=24;AF=0.444;AN=54;BaseQRankSum=0.807;DP=374;FS=5.643;HRun=0;HaplotypeScore=107.0239;InbreedingCoeff=0.1401;MQ=51.62;MQ0=10;MQRankSum=2.178;QD=5.50;ReadPosRankSum=-0.882;VQSLOD=2.1709;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:20:38.47:0,38,386	0/0:6,0:6:0.30:0,0,72	0/1:12,0:2:0:0,0,0	0/0:11,0:5:5.91:0,6,64	1/1:14,2:16:22.79:196,23,0	0/1:17,0:16:13.41:13,0,181	0/1:12,0:12:14.25:14,0,30	0/0:19,0:19:20.29:0,20,295	1/1:7,0:7:9.43:81,9,0	1/1:13,0:13:21.59:162,22,0	1/1:7,0:7:7.45:41,7,0	0/1:15,0:16:19.43:19,0,110	0/1:11,0:11:62.99:93,0,63	0/0:19,0:19:44.46:0,44,571	0/1:10,0:10:1.22:1,0,92	0/0:31,0:31:47.49:0,47,336	1/1:14,1:14:5.88:156,6,0	./.	0/1:13,0:11:18.25:18,0,218	0/0:14,0:14:39:0,39,488	0/0:16,0:16:42.09:0,42,549	0/1:13,0:13:60.62:61,0,82	0/1:13,0:13:10.93:157,0,11	0/1:14,0:15:87.15:87,0,131	0/1:12,0:10:2.82:92,0,3	1/1:12,0:12:11.61:94,12,0	0/0:5,0:5:9.43:0,9,116	0/1:4,1:5:5.58:96,0,6
chr10	47659008	.	G	GTT	8430.98	PASS	AB=0.574;AC=21;AF=0.375;AN=56;BaseQRankSum=-11.822;DP=558;FS=5.941;HRun=9;HaplotypeScore=65.3977;InbreedingCoeff=0.9081;MQ=76.62;MQ0=3;MQRankSum=-0.351;QD=31.58;ReadPosRankSum=-0.529;VQSLOD=4.7765;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,22:27:58.44:880,58,0	0/0:7,0:8:8.99:0,9,151	0/0:25,0:23:35.82:0,36,343	0/0:10,0:9:11.99:0,12,121	1/1:7,26:32:69.23:1062,69,0	0/0:15,0:15:39.08:0,39,415	0/0:10,0:10:30.08:0,30,319	0/1:8,1:31:13.80:177,0,14	0/0:18,0:18:39.07:0,39,415	1/1:4,23:29:74.73:1100,75,0	1/1:0,18:17:51.17:767,51,0	0/0:26,0:26:66.12:0,66,695	0/0:20,0:20:48.11:0,48,511	0/0:14,0:14:33.05:0,33,351	0/0:34,0:34:93.19:0,93,973	1/1:1,15:15:42.14:646,42,0	1/1:5,21:27:66.22:1008,66,0	1/1:9,15:25:47.65:696,48,0	0/0:15,0:15:39.10:0,39,414	0/0:21,0:21:60.15:0,60,639	0/0:7,0:7:17.98:0,18,169	0/0:10,0:10:30.08:0,30,319	0/0:25,0:25:72.17:0,72,759	0/0:7,0:7:15.03:0,15,160	1/1:4,15:19:16.23:661,16,0	1/1:6,25:31:76.46:1110,76,0	0/0:26,0:26:69.16:0,69,734	1/1:0,9:9:21.07:323,21,0
chr10	47660185	.	TACAC	T	953.91	PASS	AB=0.947;AC=22;AF=0.458;AN=48;BaseQRankSum=4.328;DP=665;FS=4.714;HRun=0;HaplotypeScore=128.8106;InbreedingCoeff=0.2605;MQ=60.37;MQ0=19;MQRankSum=-2.219;QD=2.68;ReadPosRankSum=1.789;VQSLOD=2.2538;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:37,0:37:0:0,0,0	0/1:8,0:8:40.15:40,0,64	./.	./.	0/0:22,0:23:0:0,0,0	0/0:18,0:16:12.04:0,12,281	0/0:36,0:35:14.49:0,14,401	./.	0/1:22,0:22:21.36:21,0,381	0/1:21,0:19:13.21:14,0,13	0/0:15,0:15:0:0,0,0	0/1:38,0:38:6.76:7,0,822	0/0:29,0:27:42.38:0,42,750	1/1:19,0:26:5.03:34,5,0	0/0:30,0:40:53.03:0,53,725	1/1:17,0:26:11.61:94,12,0	1/1:27,0:27:5.95:46,6,0	0/1:21,0:21:41.91:42,0,63	./.	1/1:18,0:19:14.27:161,14,0	0/1:38,3:41:4.21:307,0,4	0/0:11,4:14:5.75:0,6,52	0/0:17,0:17:23.93:0,24,364	0/0:19,0:21:15.26:0,15,337	1/1:16,0:16:6.01:56,6,0	1/1:16,0:16:3:28,3,0	0/1:12,8:22:7.80:173,0,8	1/1:13,0:10:9.01:84,9,0
chr10	47660227	.	CACACACACGT	C	2910.86	PASS	AB=0.833;AC=18;AF=0.321;AN=56;BaseQRankSum=7.772;DP=747;FS=3.592;HRun=0;HaplotypeScore=184.1414;InbreedingCoeff=0.4236;MQ=55.03;MQ0=28;MQRankSum=2.400;QD=10.90;ReadPosRankSum=-0.810;VQSLOD=2.2756;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:2.71:0,3,40	0/0:8,0:8:24.08:0,24,472	0/0:30,0:1:0.89:0,1,2	0/1:33,0:6:4.53:5,0,37	0/1:14,2:16:19.58:203,0,20	0/0:18,0:18:35.79:0,36,981	0/0:46,0:45:97.74:0,98,2200	1/1:31,0:27:64.08:786,64,0	0/0:30,0:27:69.24:0,69,1738	1/1:5,10:13:18.08:464,18,0	1/1:4,16:19:0.07:0,0,0	0/0:48,0:48:99:0,115,3180	0/0:39,0:37:99:0,99,2604	0/1:21,0:21:37.47:37,0,478	0/0:46,0:46:99:0,102,2875	0/1:25,0:24:99:122,0,369	0/1:2,30:32:8.82:189,0,9	0/1:9,20:28:99:270,0,118	0/0:10,0:10:25.64:0,26,387	0/0:22,0:20:42.87:0,43,745	0/0:62,0:62:99:0,108,2341	0/0:16,0:15:27.56:0,28,632	0/0:14,0:14:33.11:0,33,1118	0/0:29,0:29:75.22:0,75,1845	1/1:3,11:14:6:208,6,0	1/1:1,19:20:21.45:519,21,0	0/0:25,0:25:33.15:0,33,898	1/1:5,6:8:9.02:283,9,0
chr10	47660229	.	CACACACGT	C	2529	PASS	AB=0.941;AC=20;AF=0.357;AN=56;BaseQRankSum=9.574;DP=758;FS=9.678;HRun=0;HaplotypeScore=169.3574;InbreedingCoeff=0.4579;MQ=56.54;MQ0=28;MQRankSum=3.569;QD=7.50;ReadPosRankSum=-1.827;VQSLOD=1.4224;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:4,31:35:0:0,0,0	0/0:8,0:8:21.05:0,21,370	0/0:32,0:3:3.89:0,4,32	0/1:35,0:6:4.35:4,0,37	1/1:16,0:16:23.15:229,23,0	0/0:19,0:19:37.94:0,38,890	0/0:46,0:45:97.25:0,97,1911	1/1:35,0:31:65.84:909,66,0	0/0:29,0:26:69.22:0,69,1517	1/1:15,0:13:14.85:356,15,0	0/1:20,0:19:0.40:0,0,0	0/0:48,0:48:99:0,111,2602	0/0:36,0:34:93.32:0,93,2177	0/1:23,0:23:43.15:43,0,560	0/0:46,0:46:99:0,102,2431	0/1:26,0:25:68.35:68,0,398	0/1:32,0:32:9.06:124,0,9	0/1:29,0:28:90.59:150,0,91	0/0:13,0:13:34.36:0,34,493	0/0:23,0:21:17.77:0,18,606	0/0:62,0:62:89.49:0,89,1940	0/0:16,0:15:27.09:0,27,536	0/0:14,0:14:33.11:0,33,892	0/0:29,0:29:75.26:0,75,1623	1/1:14,0:14:6:142,6,0	1/1:20,0:20:20.44:486,20,0	0/1:25,0:25:12.13:12,0,736	1/1:11,0:8:9.02:187,9,0
chr10	47660235	.	CGT	C	2363.37	PASS	AB=1.000;AC=18;AF=0.321;AN=56;BaseQRankSum=6.500;DP=777;FS=7.037;HRun=0;HaplotypeScore=118.4157;InbreedingCoeff=0.8388;MQ=60.32;MQ0=28;MQRankSum=4.244;QD=10.37;ReadPosRankSum=-1.709;VQSLOD=2.6218;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:34,0:34:0:0,0,0	0/0:9,0:9:27.07:0,27,378	0/0:34,0:5:5.97:0,6,60	0/0:40,0:11:1.86:0,2,88	1/1:20,0:20:33.10:415,33,0	0/0:19,0:19:36.02:0,36,496	0/0:44,0:43:84.13:0,84,1200	1/1:5,31:33:81.21:998,81,0	0/0:35,0:32:80.40:0,80,1169	1/1:14,0:12:30.09:371,30,0	0/1:20,0:19:0:0,0,0	0/0:45,0:45:89.83:0,90,1272	0/0:33,0:31:69.21:0,69,1017	0/0:27,0:27:51.17:0,51,763	0/0:46,0:46:99:0,102,1439	0/0:28,0:27:54.08:0,54,535	1/1:32,0:32:5.51:67,6,0	1/1:27,0:26:10.27:115,10,0	0/0:15,0:15:39.13:0,39,576	0/0:24,0:22:54.16:0,54,774	0/0:59,0:59:98.10:0,98,1805	0/0:16,0:15:26.88:0,27,376	0/0:13,0:13:27.09:0,27,405	0/0:30,0:30:74.41:0,74,987	1/1:14,0:14:6.01:59,6,0	1/1:20,0:20:38.42:465,38,0	0/0:31,0:30:68.84:0,69,892	1/1:11,0:8:6.48:60,6,0
chr10	47661080	.	C	CT	10795	PASS	AB=0.917;AC=37;AF=0.661;AN=56;BaseQRankSum=-11.565;DP=669;FS=0.000;HRun=9;HaplotypeScore=63.5917;InbreedingCoeff=0.9056;MQ=78.48;MQ0=0;MQRankSum=-2.104;QD=23.12;ReadPosRankSum=2.714;VQSLOD=5.6622;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,16:22:28.08:530,28,0	0/0:15,0:15:38.95:0,39,329	0/0:28,0:27:24.08:0,24,456	0/0:8,0:8:14.85:0,15,113	1/1:6,19:26:56.97:602,57,0	0/0:30,0:30:71.97:0,72,625	0/0:20,0:20:47.99:0,48,417	1/1:12,25:37:74.94:781,75,0	1/1:2,19:21:48.13:531,48,0	1/1:3,18:21:51.11:545,51,0	1/1:2,24:27:65.82:667,66,0	1/1:4,19:23:22.03:458,22,0	1/1:4,25:29:63.17:697,63,0	1/1:5,26:31:49.16:768,49,0	0/0:26,0:27:73.99:0,74,627	1/1:1,18:19:48.13:531,48,0	1/1:2,32:34:87.24:962,87,0	1/1:6,18:24:22.07:471,22,0	0/0:23,0:23:53.98:0,54,466	0/0:23,0:23:65.99:0,66,573	0/1:20,2:22:3.29:3,0,432	1/1:6,8:15:0.83:205,1,0	1/1:3,21:25:39.92:638,40,0	1/1:2,16:18:16.06:405,16,0	1/1:1,24:25:63.17:697,63,0	1/1:7,28:36:84.05:904,84,0	0/0:28,0:28:77.96:0,78,677	1/1:0,12:12:36.10:398,36,0
chr10	47661729	.	A	AG	223.49	PASS	AB=0.910;AC=7;AF=0.125;AN=56;BaseQRankSum=9.256;DP=486;FS=46.206;HRun=0;HaplotypeScore=82.2368;InbreedingCoeff=-0.1470;MQ=69.07;MQ0=2;MQRankSum=-7.243;QD=2.87;ReadPosRankSum=-1.383;VQSLOD=0.8862;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:7:15.05:0,15,209	0/0:10,0:10:30.10:0,30,419	0/0:42,0:29:27.63:0,28,801	0/0:41,0:25:57.57:0,58,714	0/1:10,0:12:2.12:2,0,159	0/0:21,0:21:63.19:0,63,850	0/0:16,0:16:48.15:0,48,652	0/1:4,3:7:52.70:53,0,147	0/0:20,0:20:60.20:0,60,833	0/0:8,0:8:11.54:0,12,222	0/0:5,0:6:4.74:0,5,82	0/0:25,0:25:72.24:0,72,1004	0/0:26,0:26:78.24:0,78,1071	0/1:15,4:19:99:170,0,240	0/0:30,0:30:90.29:0,90,1238	0/1:14,1:15:66.06:66,0,356	0/1:8,0:8:13.10:13,0,187	0/0:1,0:1:3.01:0,3,42	0/0:13,0:13:36.10:0,36,470	0/0:27,0:27:75.24:0,75,1032	0/0:26,0:26:75.24:0,75,1033	0/0:18,0:18:54.18:0,54,755	0/0:28,0:28:84.27:0,84,1154	0/0:13,0:13:36.12:0,36,503	0/1:9,1:10:6.31:6,0,226	0/1:7,0:7:33.65:34,0,106	0/0:26,0:26:78.23:0,78,1043	0/0:3,0:3:9.03:0,9,122
chr10	47661736	.	A	AGTC	3500.11	PASS	AB=0.974;AC=15;AF=0.268;AN=56;BaseQRankSum=10.503;DP=542;FS=67.628;HRun=0;HaplotypeScore=258.1092;InbreedingCoeff=0.0805;MQ=62.28;MQ0=2;MQRankSum=-11.700;QD=20.23;ReadPosRankSum=-0.285;VQSLOD=1.0890;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:20,3:23:62.14:506,0,62	0/0:11,0:10:30.10:0,30,555	0/0:32,0:24:65.72:0,66,1143	0/0:35,0:24:26.19:0,26,841	0/1:13,0:14:34.33:116,0,34	0/0:23,0:23:69.22:0,69,1249	0/0:16,0:16:48.15:0,48,842	0/1:11,0:6:39.91:57,0,40	0/0:18,0:18:54.19:0,54,986	0/1:17,1:18:25.05:676,0,25	1/1:13,0:13:0.96:272,1,0	0/0:23,0:23:69.24:0,69,1274	0/0:28,0:28:81.26:0,81,1462	0/1:27,0:27:10.39:577,0,10	0/0:31,0:31:93.32:0,93,1716	0/1:23,0:23:72.66:339,0,73	0/1:7,0:7:11.58:64,0,12	1/1:4,0:4:6.02:103,6,0	0/0:15,0:15:36.08:0,36,618	0/0:26,0:26:72.25:0,72,1336	0/0:26,0:26:78.24:0,78,1420	0/0:17,0:17:51.17:0,51,951	0/0:27,0:27:81.28:0,81,1491	0/0:13,0:13:36.12:0,36,657	0/1:14,0:14:51.67:249,0,52	0/1:17,0:17:8.76:531,0,9	0/0:28,0:28:84.27:0,84,1521	1/1:2,0:2:2.33:9,2,0
chr10	47664366	.	TC	T	340.20	PASS	AC=22;AF=0.611;AN=36;BaseQRankSum=3.204;DP=102;FS=17.868;HRun=2;HaplotypeScore=17.1494;InbreedingCoeff=0.6311;MQ=115.39;MQ0=2;MQRankSum=-1.518;QD=17.91;ReadPosRankSum=-4.315;VQSLOD=1.0902;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	1/1:0,1:1:3.01:37,3,0	0/0:10,0:10:24.04:0,24,311	0/0:9,0:8:18.05:0,18,243	./.	./.	./.	0/0:13,0:13:36.10:0,36,503	1/1:1,0:1:3.01:37,3,0	1/1:1,0:1:3.01:38,3,0	./.	1/1:0,4:3:3.01:37,3,0	./.	./.	1/1:2,0:2:6.01:62,6,0	1/1:2,0:2:3.01:37,3,0	1/1:2,0:2:6.02:74,6,0	1/1:2,0:2:2.99:23,3,0	0/0:8,0:8:24.08:0,24,358	0/0:7,0:7:21.07:0,21,310	0/0:21,0:21:60.01:0,60,866	1/1:1,0:1:3.01:37,3,0	./.	./.	1/1:1,0:1:3.01:37,3,0	1/1:0,2:2:6.01:63,6,0	0/0:6,0:6:18.06:0,18,268	./.
chr10	47664877	.	GAA	G	13576.29	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=18.666;DP=699;FS=9.655;HRun=4;HaplotypeScore=117.5591;InbreedingCoeff=0.9998;MQ=80.93;MQ0=0;MQRankSum=-4.843;QD=37.40;ReadPosRankSum=6.604;VQSLOD=3.3746;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,46:48:99:1633,111,0	1/1:0,13:13:27.09:397,27,0	0/0:20,0:20:52.42:0,52,780	0/0:29,0:29:71.89:0,72,995	1/1:0,29:29:72.24:1058,72,0	1/1:0,27:27:69.23:1015,69,0	1/1:2,20:22:54.18:794,54,0	0/0:27,0:27:81.27:0,81,1489	0/0:22,0:22:60.21:0,60,1117	1/1:1,34:35:99:1418,99,0	1/1:0,16:16:30.10:441,30,0	0/0:33,0:33:93.29:0,93,1669	0/0:25,0:25:72.21:0,72,1244	0/0:18,0:18:54.17:0,54,976	1/1:1,30:31:81.27:1184,81,0	1/1:1,21:22:51.17:750,51,0	1/1:0,37:37:99:1500,102,0	1/1:0,21:21:57.19:834,57,0	0/0:16,0:16:48.11:0,48,777	0/0:19,0:19:48.16:0,48,870	0/0:21,0:21:60.21:0,60,1117	0/0:14,0:14:42.14:0,42,785	0/0:23,0:23:69.24:0,69,1292	0/0:35,0:34:99:0,105,1905	1/1:0,21:21:57.19:838,57,0	1/1:0,22:22:66.22:971,66,0	0/0:33,0:34:88.17:0,88,1689	1/1:0,19:19:51.17:743,51,0
chr10	47666582	.	GC	G	4660.33	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=10.419;DP=636;FS=7.528;HRun=1;HaplotypeScore=67.4825;InbreedingCoeff=0.9978;MQ=82.23;MQ0=0;MQRankSum=-1.980;QD=33.29;ReadPosRankSum=3.995;VQSLOD=4.3626;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,144,2281	0/0:11,0:11:30.10:0,30,479	0/0:22,0:22:55.18:0,55,738	0/0:15,0:15:35.23:0,35,511	0/0:21,0:21:57.19:0,57,906	0/0:15,0:15:45.14:0,45,692	0/0:16,0:16:48.16:0,48,765	0/0:29,0:29:81.26:0,81,1242	1/1:0,26:26:66.22:916,66,0	0/0:14,0:14:39.13:0,39,623	0/0:14,0:14:39.13:0,39,621	1/1:0,34:34:78.26:1086,78,0	1/1:0,25:25:60.20:838,60,0	0/0:31,0:31:93.30:0,93,1455	0/0:32,0:32:96.30:0,96,1481	0/0:32,0:32:96.33:0,96,1531	0/0:27,0:27:81.27:0,81,1269	0/0:17,0:17:51.15:0,51,772	0/0:19,0:19:54.16:0,54,807	0/0:22,0:22:66.22:0,66,1044	0/0:29,0:29:84.22:0,84,1302	1/1:0,17:17:42.07:563,42,0	1/1:1,10:11:24.08:335,24,0	1/1:0,27:27:66.22:922,66,0	0/0:16,0:16:45.15:0,45,716	0/0:30,0:30:90.31:0,90,1435	0/0:30,0:30:90.29:0,90,1408	0/0:6,0:6:18.06:0,18,284
chr10	47667114	.	G	GA	1801.30	PASS	AB=0.960;AC=38;AF=0.679;AN=56;BaseQRankSum=1.194;DP=483;FS=7.842;HRun=15;HaplotypeScore=82.5120;InbreedingCoeff=0.3386;MQ=62.52;MQ0=5;MQRankSum=-4.821;QD=4.82;ReadPosRankSum=0.778;VQSLOD=2.0026;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:19,1:20:17.65:99,18,0	0/1:9,1:11:6.46:6,0,61	0/0:22,0:8:14.53:0,15,69	0/0:22,0:13:5:0,5,32	1/1:17,2:18:21.74:133,22,0	0/0:26,0:26:13.87:0,14,80	0/0:18,0:18:0.09:0,0,80	0/1:16,0:22:2.80:3,0,31	1/1:16,1:16:24.93:200,25,0	1/1:12,0:13:21.85:137,22,0	1/1:14,0:16:14.45:66,14,0	1/1:20,1:20:24.22:175,24,0	1/1:15,0:15:21.60:140,22,0	1/1:12,2:13:11.41:100,11,0	0/0:19,1:20:16.93:0,17,102	1/1:6,0:10:2.84:14,3,0	1/1:14,1:17:25.03:128,25,0	1/1:15,0:16:15.71:94,16,0	0/1:26,1:25:15.47:15,0,144	0/1:15,1:16:15.52:16,0,30	0/1:9,0:10:8.57:9,0,56	0/1:10,1:10:6.49:42,0,6	0/1:14,1:15:1.23:82,0,1	1/1:14,4:17:12.70:195,13,0	1/1:15,2:16:19.15:146,19,0	1/1:15,0:15:20.59:89,21,0	0/1:15,0:15:11.99:12,0,31	1/1:16,0:17:12.99:74,13,0
chr10	47667186	.	TAC	T	811.74	PASS	AB=1.000;AC=20;AF=0.357;AN=56;BaseQRankSum=5.084;DP=380;FS=8.634;HRun=0;HaplotypeScore=100.4980;InbreedingCoeff=0.5602;MQ=70.71;MQ0=0;MQRankSum=-1.517;QD=4.77;ReadPosRankSum=5.390;VQSLOD=1.3451;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:27:10.66:0,11,191	0/1:9,0:9:25.80:26,0,45	0/0:15,0:11:19.20:0,19,177	0/0:10,0:9:15.58:0,16,210	0/0:14,0:14:16.85:0,17,80	1/1:10,0:10:19.02:70,19,0	0/1:21,0:21:19.45:78,0,19	0/0:16,0:16:41.96:0,42,408	1/1:14,0:14:5.48:84,5,0	0/0:10,0:12:7.60:0,8,128	0/0:9,0:9:6.95:0,7,58	1/1:19,0:19:0.57:99,1,0	1/1:17,2:19:14.94:162,15,0	1/1:9,0:9:19.98:82,20,0	0/1:20,0:20:10.08:71,0,10	1/1:16,0:16:36.33:137,36,0	0/0:29,0:29:64.20:0,64,331	0/0:15,0:15:34.89:0,35,167	0/0:6,0:6:12:0,12,159	0/0:8,0:8:4.23:0,4,196	0/0:9,0:9:27.02:0,27,381	0/1:8,0:8:22.63:46,0,23	1/1:7,1:7:13.78:76,14,0	1/1:16,1:16:10.75:73,11,0	0/0:14,0:14:16.05:0,16,99	0/0:8,0:8:15.38:0,15,88	0/0:13,0:14:20.50:0,21,345	0/0:4,0:4:11.04:0,11,51
chr10	47667187	.	ACC	A	5033.35	PASS	AB=0.720;AC=43;AF=0.768;AN=56;BaseQRankSum=3.802;DP=383;FS=19.000;HRun=12;HaplotypeScore=87.8011;InbreedingCoeff=0.6582;MQ=71.75;MQ0=0;MQRankSum=-1.788;QD=15.54;ReadPosRankSum=4.664;VQSLOD=1.9640;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,2:27:35.75:215,36,0	1/1:2,6:8:18.02:183,18,0	0/0:15,0:12:15.44:0,15,165	0/0:9,0:9:15.15:0,15,144	0/1:2,1:15:9.26:20,0,9	1/1:0,10:10:29.96:281,30,0	1/1:3,17:21:51.04:507,51,0	0/0:15,0:16:12.99:0,13,73	1/1:1,12:14:35.73:346,36,0	1/1:6,0:12:21.26:96,21,0	1/1:3,0:9:15.19:81,15,0	1/1:2,17:19:48.08:484,48,0	1/1:3,16:19:50.92:480,51,0	1/1:0,9:9:24.05:244,24,0	1/1:3,16:20:40.31:399,40,0	1/1:0,16:16:48.10:487,48,0	1/1:4,0:29:59.21:241,59,0	1/1:0,0:15:29.40:106,29,0	0/0:7,0:7:9.03:0,9,121	0/1:6,1:8:12.97:13,0,156	0/0:10,0:10:18.03:0,18,228	1/1:3,5:8:14.21:151,14,0	1/1:1,7:7:14.93:136,15,0	1/1:4,13:16:35.79:365,36,0	1/1:2,0:14:18.98:71,19,0	1/1:4,0:8:10.67:60,11,0	0/1:11,2:14:34.03:34,0,213	1/1:1,0:4:7.93:33,8,0
chr10	47667572	.	GAAAAAAAAGA	G	5300.65	PASS	AB=0.548;AC=11;AF=0.196;AN=56;BaseQRankSum=-3.182;DP=466;FS=4.030;HRun=0;HaplotypeScore=177.6727;InbreedingCoeff=0.8731;MQ=52.10;MQ0=12;MQRankSum=-9.444;QD=62.36;ReadPosRankSum=2.335;VQSLOD=4.7747;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:26:63.21:0,63,2966	0/0:8,0:8:24.08:0,24,1077	0/0:5,0:4:12.04:0,12,417	0/0:7,0:5:14.88:0,15,456	0/0:18,0:17:39.13:0,39,1342	0/0:23,0:23:54.18:0,54,2556	0/0:20,0:18:36.12:0,36,1650	0/0:23,0:21:43.38:0,43,1873	1/1:2,9:11:24.08:712,24,0	0/0:27,0:26:72.25:0,72,2655	0/0:15,0:16:39.13:0,39,1363	1/1:1,15:18:45.15:1352,45,0	0/1:3,14:17:69.29:1226,0,69	0/0:14,0:14:27.09:0,27,1222	0/0:23,0:23:50.53:0,51,2334	0/0:18,0:18:39.13:0,39,1453	0/0:18,0:17:42.14:0,42,1461	0/0:26,0:25:57.19:0,57,2147	0/0:13,0:12:30.10:0,30,1371	0/0:14,0:14:33.11:0,33,1612	0/0:12,0:12:33.11:0,33,1645	1/1:3,9:12:27.09:804,27,0	1/1:5,11:15:21.89:728,22,0	1/1:1,8:9:17.98:478,18,0	0/0:19,0:19:51.17:0,51,1878	0/0:17,0:16:39.13:0,39,1452	0/0:16,0:15:32.79:0,33,1445	0/0:16,0:16:39.13:0,39,1447
chr10	47667581	.	GA	G	4135.94	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=12.103;DP=496;FS=0.754;HRun=10;HaplotypeScore=119.6293;InbreedingCoeff=0.9779;MQ=57.83;MQ0=11;MQRankSum=-9.024;QD=16.03;ReadPosRankSum=3.651;VQSLOD=3.2821;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:69.13:0,69,739	0/0:10,0:10:24.06:0,24,259	0/0:8,0:7:17.91:0,18,156	0/0:9,0:6:14.64:0,15,125	1/1:7,13:19:14.84:352,15,0	0/0:20,1:21:28.09:0,28,534	0/0:23,0:22:51.04:0,51,527	0/0:8,0:28:65.57:0,66,337	1/1:11,0:10:17.76:58,18,0	1/1:10,23:32:82.78:706,83,0	1/1:3,14:17:44.98:385,45,0	1/1:16,0:17:33.45:109,33,0	1/1:15,0:15:14.48:78,14,0	0/0:2,0:16:25.96:0,26,153	0/0:24,0:24:51.13:0,51,557	1/1:2,14:16:38.98:338,39,0	1/1:6,11:16:35.96:309,36,0	1/1:12,15:27:20.54:443,21,0	0/0:17,0:16:38.83:0,39,389	0/0:17,0:17:44.29:0,44,457	0/0:16,0:16:19.17:0,19,434	1/1:10,0:10:19.98:65,20,0	1/1:11,0:11:17.65:58,18,0	1/1:8,0:8:11.10:36,11,0	1/1:3,19:22:50.97:439,51,0	1/1:6,12:18:46.80:395,47,0	0/0:18,1:17:13.05:0,13,368	1/1:1,14:15:41.99:365,42,0
chr10	47667594	.	TC	T	10261.84	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=1.060;DP=553;FS=2.308;HRun=2;HaplotypeScore=110.2168;InbreedingCoeff=0.9988;MQ=74.71;MQ0=0;MQRankSum=-0.652;QD=34.44;ReadPosRankSum=6.089;VQSLOD=4.4141;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,29:29:84.27:1087,84,0	1/1:0,8:8:24.08:312,24,0	0/0:23,0:22:48.18:0,48,755	0/0:13,0:11:29.43:0,29,376	1/1:0,21:21:54.18:700,54,0	1/1:0,22:22:66.21:857,66,0	1/1:0,20:20:51.17:662,51,0	0/0:33,0:33:99:0,99,1374	0/0:11,0:11:27.08:0,27,383	1/1:1,32:33:96.31:1246,96,0	1/1:0,19:19:54.18:700,54,0	0/0:25,0:25:68.97:0,69,997	0/0:18,0:18:48.16:0,48,716	0/0:16,0:16:27.09:0,27,399	1/1:1,21:22:60.20:779,60,0	1/1:0,18:18:45.15:584,45,0	1/1:1,16:16:39.13:506,39,0	1/1:2,24:26:39.79:827,40,0	0/0:16,0:16:45.14:0,45,653	0/0:19,0:19:57.19:0,57,854	0/0:21,0:21:60.20:0,60,898	0/0:15,0:15:45.15:0,45,669	0/0:18,0:18:47.56:0,48,652	0/0:11,0:11:21.03:0,21,288	1/1:3,22:25:54.13:679,54,0	1/1:2,20:22:60.19:779,60,0	0/0:16,0:15:42.14:0,42,628	1/1:0,16:16:42.14:545,42,0
chr10	47671353	.	A	AT	4311.98	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-12.581;DP=720;FS=2.145;HRun=7;HaplotypeScore=68.1620;InbreedingCoeff=0.9994;MQ=75.83;MQ0=0;MQRankSum=-1.026;QD=29.33;ReadPosRankSum=2.604;VQSLOD=5.4955;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:56:99:0,156,1499	0/0:8,0:8:24.04:0,24,232	0/0:20,0:20:32.92:0,33,311	0/0:19,0:19:38.35:0,38,318	0/0:35,0:35:99:0,102,985	0/0:28,0:28:81.11:0,81,776	0/0:27,0:27:69.11:0,69,666	0/0:31,0:31:75.08:0,75,713	1/1:2,29:31:81.25:978,81,0	0/0:25,0:25:72.11:0,72,695	0/0:20,0:20:57.05:0,57,535	1/1:0,20:20:60.18:725,60,0	1/1:3,25:28:68.80:833,69,0	0/0:34,0:34:87.12:0,87,840	0/0:40,0:40:99:0,114,1101	0/0:28,0:28:78.10:0,78,748	0/0:29,0:29:72.11:0,72,695	0/0:20,0:20:39.05:0,39,377	0/0:26,0:26:72.11:0,72,695	0/0:25,0:25:69.08:0,69,655	0/0:15,0:15:42.07:0,42,406	1/1:3,17:20:48.15:580,48,0	1/1:7,21:28:51.16:616,51,0	1/1:4,16:20:48.15:580,48,0	0/0:22,0:22:54.08:0,54,522	0/0:25,0:25:66.03:0,66,620	0/0:30,0:30:84.13:0,84,811	0/0:10,0:10:30.05:0,30,290
chr10	47674920	.	TA	T	4146.51	PASS	AB=0.676;AC=30;AF=0.536;AN=56;BaseQRankSum=6.988;DP=476;FS=19.355;HRun=12;HaplotypeScore=52.5540;InbreedingCoeff=0.7575;MQ=70.41;MQ0=0;MQRankSum=-1.574;QD=13.82;ReadPosRankSum=4.660;VQSLOD=2.0418;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,20:29:46.84:354,47,0	0/0:4,0:4:12.02:0,12,122	0/1:25,1:16:6.26:6,0,123	0/0:17,0:16:13.24:0,13,126	0/1:3,17:20:3.65:297,0,4	0/0:16,2:18:0.36:0,0,290	0/0:21,0:21:51.08:0,51,509	0/0:18,0:18:30.54:0,31,298	1/1:1,14:15:35.86:279,36,0	1/1:7,14:22:43.83:328,44,0	1/1:3,11:14:29.78:224,30,0	0/1:5,14:19:0.53:179,0,1	1/1:3,7:10:14.93:116,15,0	0/0:16,0:17:44.77:0,45,413	0/0:19,2:21:21.84:0,22,398	1/1:0,12:13:34.91:261,35,0	1/1:2,15:17:35.86:279,36,0	1/1:1,17:20:39.93:290,40,0	0/0:17,0:17:36.05:0,36,355	0/0:14,0:15:11.83:0,12,256	0/0:11,0:11:26.94:0,27,238	1/1:2,13:15:26.84:208,27,0	1/1:2,19:21:44.76:343,45,0	1/1:2,11:13:26.89:209,27,0	1/1:1,19:20:53.79:418,54,0	1/1:7,14:21:38.78:297,39,0	0/0:17,0:17:48.09:0,48,485	0/1:2,3:5:1.92:58,0,2
chr10	47675052	.	TGGG	T	2355.75	PASS	AB=1.000;AC=37;AF=0.740;AN=50;BaseQRankSum=0.388;DP=271;FS=2.687;HRun=17;HaplotypeScore=66.7673;InbreedingCoeff=0.4405;MQ=38.03;MQ0=22;MQRankSum=0.108;QD=11.27;ReadPosRankSum=4.835;VQSLOD=0.2495;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,7:11:17.99:183,18,0	./.	0/0:24,0:3:3.01:0,3,44	0/1:19,0:4:3.98:4,0,32	1/1:5,10:12:11.91:122,12,0	./.	1/1:9,1:8:0.76:27,1,0	0/0:5,0:1:0:0,0,0	1/1:4,2:6:5.94:61,6,0	1/1:10,11:20:29.77:304,30,0	1/1:4,9:11:22.60:218,23,0	1/1:2,5:7:14.95:139,15,0	1/1:2,4:6:12.03:122,12,0	./.	0/0:4,0:4:0:0,0,0	1/1:2,6:8:18:182,18,0	1/1:7,5:11:14.13:128,14,0	1/1:6,4:10:11.81:107,12,0	0/0:4,0:3:2.98:0,3,22	0/0:4,1:6:0:0,0,0	0/0:7,0:5:0:0,0,0	1/1:4,3:7:8.96:91,9,0	1/1:3,14:14:28.34:301,28,0	1/1:2,5:6:3.50:33,4,0	1/1:7,4:11:14.93:139,15,0	1/1:4,8:10:20.92:213,21,0	1/1:3,0:3:2.97:31,3,0	1/1:4,3:5:5.94:61,6,0
chr10	47675069	.	G	GAAAAA	9109.93	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=4.929;DP=304;FS=2.063;HRun=2;HaplotypeScore=74.7123;InbreedingCoeff=0.9166;MQ=55.87;MQ0=7;MQRankSum=-5.567;QD=47.95;ReadPosRankSum=3.289;VQSLOD=2.8776;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:11,2:12:27.08:528,27,0	0/0:5,0:4:9.03:0,9,157	0/0:31,0:11:28.26:0,28,347	0/0:22,0:5:3.12:0,3,145	1/1:18,2:15:33.11:636,33,0	0/0:3,0:3:9.03:0,9,178	0/0:8,0:8:24.08:0,24,447	0/0:12,0:12:36.11:0,36,668	1/1:2,3:7:12.04:294,12,0	1/1:16,1:13:39.13:831,39,0	1/1:15,1:14:42.13:901,42,0	1/1:8,2:9:27.09:629,27,0	1/1:5,2:7:18.06:403,18,0	0/0:5,0:5:12.04:0,12,220	0/0:8,0:8:21.07:0,21,406	1/1:9,1:10:30.09:592,30,0	1/1:7,7:14:30.10:736,30,0	1/1:11,1:11:21.07:515,21,0	0/0:4,0:4:12.01:0,12,200	0/0:7,0:7:8.59:0,9,178	0/0:3,0:3:9.03:0,9,164	1/1:3,3:5:15.05:324,15,0	1/1:16,0:13:39.13:857,39,0	1/1:7,2:7:14.94:332,15,0	1/1:9,1:9:27.07:526,27,0	1/1:12,2:12:36.12:753,36,0	0/0:6,0:6:12.04:0,12,201	1/1:8,0:7:20.98:256,21,0
chr10	47676096	.	CCCG	C	674.13	PASS	AC=14;AF=0.269;AN=52;BaseQRankSum=-0.018;DP=329;FS=0.764;HRun=0;HaplotypeScore=47.9749;InbreedingCoeff=0.6692;MQ=67.69;MQ0=24;MQRankSum=-1.295;QD=8.32;ReadPosRankSum=0.926;VQSLOD=2.3578;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:14:17.93:0,18,288	./.	0/0:61,0:17:24.18:0,24,480	0/0:70,0:16:10.04:0,10,308	1/1:12,0:12:5.88:43,6,0	0/0:6,0:6:12.04:0,12,214	0/0:8,0:8:5.72:0,6,248	0/0:6,0:5:6.02:0,6,89	0/0:5,0:4:8.86:0,9,136	1/1:9,0:9:1.29:24,1,0	./.	0/0:5,0:5:8.07:0,8,127	0/0:7,0:7:16.93:0,17,202	0/0:7,0:7:11.97:0,12,146	0/0:6,0:6:3.01:0,3,50	0/0:4,0:4:9.03:0,9,133	1/1:20,2:20:28.94:212,29,0	1/1:16,0:15:16.41:89,16,0	0/0:2,0:1:2.99:0,3,23	0/0:3,0:3:9.02:0,9,134	0/0:3,0:3:8.98:0,9,110	0/0:8,0:8:9.03:0,9,148	0/0:6,0:6:3.01:0,3,50	0/0:9,0:8:12.04:0,12,179	1/1:3,0:3:2.97:20,3,0	1/1:4,12:15:22.32:359,22,0	0/0:8,0:8:12.02:0,12,146	1/1:2,1:3:8.94:90,9,0
chr10	47676097	.	CCG	C	1036.76	PASS	AB=1.000;AC=15;AF=0.288;AN=52;BaseQRankSum=-0.980;DP=318;FS=0.000;HRun=0;HaplotypeScore=42.8318;InbreedingCoeff=0.6404;MQ=68.66;MQ0=23;MQRankSum=-1.340;QD=11.65;ReadPosRankSum=0.484;VQSLOD=2.7539;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:13:18.01:0,18,237	./.	0/0:62,0:17:8.77:0,9,360	0/0:68,1:16:4.13:0,4,201	1/1:5,7:12:6.02:90,6,0	0/0:6,0:6:12.03:0,12,160	0/1:8,0:8:2.74:3,0,166	0/0:4,0:3:6.01:0,6,59	0/0:4,0:4:8.86:0,9,111	1/1:3,6:9:8.70:101,9,0	./.	0/0:5,0:5:6.81:0,7,74	0/0:7,0:7:14.70:0,15,136	0/0:6,0:6:11.95:0,12,110	0/0:5,0:5:3.01:0,3,36	0/0:4,0:4:9.02:0,9,89	1/1:5,17:20:29.83:402,30,0	1/1:3,13:15:20.96:290,21,0	0/0:2,0:1:2.99:0,3,23	0/0:3,0:3:9.01:0,9,106	0/0:3,0:3:8.97:0,9,85	0/0:7,0:7:9.02:0,9,107	0/0:5,0:5:3.01:0,3,37	0/0:9,0:8:11.93:0,12,125	1/1:3,0:3:2.97:20,3,0	1/1:16,0:15:24.03:231,24,0	0/0:7,0:7:11.99:0,12,104	1/1:3,0:3:8.93:67,9,0
chr10	47676098	.	CG	C	675.46	PASS	AB=0.970;AC=15;AF=0.288;AN=52;BaseQRankSum=1.057;DP=312;FS=1.609;HRun=1;HaplotypeScore=41.9614;InbreedingCoeff=0.6280;MQ=69.17;MQ0=24;MQRankSum=-1.801;QD=4.89;ReadPosRankSum=0.143;VQSLOD=0.2832;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:17.68:0,18,157	./.	0/1:63,2:17:5.55:6,0,239	0/0:73,1:17:9.88:0,10,145	1/1:7,2:9:5.99:51,6,0	0/0:5,0:5:11.94:0,12,109	0/0:9,0:9:11.39:0,11,131	0/0:4,0:3:5.99:0,6,49	0/0:4,0:4:8.86:0,9,85	1/1:6,2:8:9.01:97,9,0	./.	0/0:5,0:5:6.67:0,7,47	0/0:6,0:6:5.07:0,5,64	0/0:6,0:6:11.46:0,11,70	0/0:4,0:4:2.98:0,3,22	0/0:5,0:5:8.51:0,9,43	1/1:20,2:20:29.61:236,30,0	1/1:13,2:15:20.97:185,21,0	0/0:2,0:1:2.99:0,3,23	0/0:3,0:3:8.80:0,9,76	0/0:3,0:3:8.80:0,9,54	0/0:6,0:6:8.81:0,9,67	0/0:2,0:2:2.92:0,3,17	0/0:9,0:8:10.20:0,10,71	1/1:2,0:2:2.97:20,3,0	1/1:13,1:13:23.88:188,24,0	0/0:7,0:7:11.37:0,11,65	1/1:3,0:3:8.91:61,9,0
chr10	47676099	.	G	GC	447.05	PASS	AB=0.971;AC=28;AF=0.583;AN=48;BaseQRankSum=-5.940;DP=322;FS=7.215;HRun=10;HaplotypeScore=45.9076;InbreedingCoeff=0.4878;MQ=68.25;MQ0=23;MQRankSum=0.776;QD=4.10;ReadPosRankSum=0.070;VQSLOD=-0.2881;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:13,2:14:6.89:52,0,7	0/1:2,0:2:0:0,0,0	0/0:67,0:18:25.56:0,26,179	0/0:80,0:18:23.07:0,23,151	0/0:9,0:9:3.85:0,4,11	1/1:5,0:5:9.91:39,10,0	1/1:8,0:8:16.14:87,16,0	1/1:4,0:3:2.84:14,3,0	0/1:5,0:5:0:0,0,0	0/0:9,0:9:5.74:0,6,17	./.	1/1:5,0:5:6.39:40,6,0	1/1:5,0:6:8.77:54,9,0	1/1:2,4:6:6.01:62,6,0	1/1:2,2:4:2.37:8,2,0	1/1:5,0:5:5.68:28,6,0	0/1:22,0:20:12.08:12,0,27	0/0:16,0:16:12.45:0,12,36	./.	0/0:3,0:3:2.98:0,3,23	1/1:2,1:3:3.01:32,3,0	1/1:5,0:5:5.87:35,6,0	./.	1/1:8,0:8:8.88:57,9,0	./.	0/0:13,0:13:9.34:0,9,31	1/1:1,4:6:8.92:80,9,0	0/0:3,0:3:1.81:0,2,5
chr10	47676109	.	C	CCT	936.83	PASS	AB=0.799;AC=22;AF=0.407;AN=54;BaseQRankSum=-3.404;DP=411;FS=3.157;HRun=0;HaplotypeScore=65.2776;InbreedingCoeff=0.5070;MQ=74.37;MQ0=31;MQRankSum=-0.574;QD=9.18;ReadPosRankSum=3.013;VQSLOD=2.9532;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:7,0:19:1.09:63,0,1	1/1:3,0:3:8.96:70,9,0	0/0:96,0:29:44.07:0,44,345	0/0:103,0:29:36.23:0,36,323	0/0:13,0:12:16.53:0,17,129	1/1:0,0:5:10.71:43,11,0	1/1:2,2:10:17.05:126,17,0	1/1:8,0:8:11.91:88,12,0	0/1:4,0:4:4.77:42,0,5	0/0:8,0:8:0.82:0,1,64	0/0:3,0:3:5.97:0,6,47	0/1:1,5:7:2.32:101,0,2	1/1:4,1:6:17.71:160,18,0	0/0:5,0:5:0.12:0,0,20	1/1:5,0:6:8.68:63,9,0	1/1:0,0:7:6.02:74,6,0	0/0:28,0:26:43.70:0,44,323	0/0:19,0:20:32.82:0,33,269	0/0:1,0:1:3:0,3,25	0/0:3,0:3:2.98:0,3,23	0/0:5,0:5:1.06:0,1,21	1/1:0,4:6:6.02:101,6,0	./.	1/1:1,10:14:9.03:162,9,0	0/0:6,0:6:5.97:0,6,48	0/0:12,0:12:31.18:0,31,249	0/1:6,0:6:14.25:19,0,14	0/0:1,0:1:3:0,3,25
chr10	47676983	.	TG	T	6373.64	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=11.513;DP=612;FS=8.605;HRun=3;HaplotypeScore=72.4952;InbreedingCoeff=0.9911;MQ=78.92;MQ0=0;MQRankSum=1.046;QD=29.37;ReadPosRankSum=0.956;VQSLOD=4.0679;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:26:70.07:407,70,0	0/0:6,0:6:18.06:0,18,259	0/0:14,0:15:11.45:0,11,380	0/0:15,0:14:19.15:0,19,331	1/1:0,7:7:21.07:260,21,0	0/0:20,0:20:60.18:0,60,828	0/0:29,0:29:87.28:0,87,1236	1/1:25,0:25:72.03:386,72,0	0/0:29,0:29:87.29:0,87,1251	1/1:0,14:14:36.11:445,36,0	1/1:0,6:6:18.06:223,18,0	0/0:22,0:22:63.21:0,63,900	0/0:31,0:31:93.30:0,93,1315	0/0:47,0:47:99:0,135,1922	0/0:24,0:24:69.19:0,69,970	1/1:0,34:34:93.29:1153,93,0	1/1:2,28:30:59.99:946,60,0	1/1:2,34:36:93.29:1153,93,0	0/0:24,0:24:72.20:0,72,994	0/0:18,0:18:54.17:0,54,760	0/0:45,0:45:99:0,129,1780	0/0:13,0:13:39.13:0,39,561	0/0:14,0:14:36.11:0,36,500	0/0:29,0:29:84.24:0,84,1186	1/1:0,12:12:36.11:445,36,0	1/1:2,14:16:45.13:545,45,0	0/0:14,0:14:42.14:0,42,605	1/1:0,11:11:33.10:409,33,0
chr10	47676986	.	GC	G	3800.12	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=15.851;DP=615;FS=8.492;HRun=1;HaplotypeScore=81.8612;InbreedingCoeff=0.9813;MQ=76.35;MQ0=0;MQRankSum=-0.654;QD=17.35;ReadPosRankSum=1.645;VQSLOD=3.3928;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,25:25:72.24:1006,72,0	0/0:7,0:7:21.06:0,21,312	0/0:12,0:12:26.37:0,26,404	0/0:14,0:13:23.27:0,23,365	1/1:7,0:7:19.27:86,19,0	0/0:22,0:22:63.18:0,63,943	0/0:31,0:31:93.29:0,93,1430	1/1:0,26:26:78.25:1067,78,0	0/0:30,0:30:90.28:0,90,1390	1/1:14,0:14:11.57:127,12,0	1/1:6,0:6:16.66:79,17,0	0/0:24,0:24:72.15:0,72,1066	0/0:30,0:30:90.28:0,90,1404	0/0:46,0:46:99:0,138,2149	0/0:22,0:22:66.22:0,66,1046	1/1:34,0:34:85.07:379,85,0	1/1:31,0:31:9.39:272,9,0	1/1:37,0:37:26.09:314,26,0	0/0:23,0:23:69.22:0,69,1067	0/0:18,0:18:54.18:0,54,850	0/0:41,0:41:99:0,120,1912	0/0:14,0:14:42.12:0,42,621	0/0:13,0:13:36.12:0,36,573	0/0:32,0:32:93.18:0,93,1382	1/1:12,0:12:33:167,33,0	1/1:15,1:16:15.20:161,15,0	0/0:17,0:17:51.07:0,51,737	1/1:11,0:11:30.54:141,31,0
chr10	47677083	.	T	TC	5330.30	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=6.511;DP=739;FS=3.117;HRun=3;HaplotypeScore=84.2811;InbreedingCoeff=0.9988;MQ=85.24;MQ0=0;MQRankSum=-1.834;QD=34.61;ReadPosRankSum=3.225;VQSLOD=5.5229;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:33:99:0,99,1174	0/0:9,0:9:21.06:0,21,252	0/0:24,0:24:63.07:0,63,699	0/0:25,0:25:54.15:0,54,619	0/0:23,0:23:69.20:0,69,817	0/0:21,0:21:57.17:0,57,684	0/0:42,0:42:99:0,105,1244	0/0:21,0:21:63.18:0,63,739	1/1:2,14:16:42.14:588,42,0	0/0:22,0:22:66.20:0,66,792	0/0:11,0:11:27.08:0,27,324	1/1:2,35:37:99:1380,99,0	1/1:2,26:28:75.21:1018,75,0	0/0:35,0:35:96.29:0,96,1151	0/0:40,0:39:99:0,120,1428	0/0:33,0:33:93.26:0,93,1093	0/0:31,0:31:93.23:0,93,1079	0/0:30,0:30:84.20:0,84,977	0/0:23,0:23:66.19:0,66,780	0/0:19,0:19:54.17:0,54,648	0/0:56,0:56:99:0,159,1908	1/1:1,21:22:54.18:755,54,0	1/1:2,17:19:48.16:666,48,0	1/1:4,28:32:66.02:924,66,0	0/0:21,0:21:57.17:0,57,683	0/0:23,0:23:66.17:0,66,777	0/0:30,0:30:75.20:0,75,876	0/0:12,0:12:27.08:0,27,321
chr10	47677260	.	G	GTCCC	16684.97	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-11.221;DP=710;FS=0.619;HRun=0;HaplotypeScore=111.4520;InbreedingCoeff=0.9998;MQ=80.39;MQ0=0;MQRankSum=-8.930;QD=68.95;ReadPosRankSum=-0.054;VQSLOD=6.5968;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,33:46:99:2548,102,0	0/0:15,0:15:36.12:0,36,695	0/0:21,0:21:60.20:0,60,1137	0/0:22,0:22:58.27:0,58,1130	1/1:1,15:17:51.18:1409,51,0	0/0:28,0:28:78.27:0,78,1558	0/0:28,0:28:84.26:0,84,1595	0/0:24,0:24:69.23:0,69,1344	0/0:20,0:20:51.18:0,51,1018	1/1:3,26:30:90.31:2434,90,0	1/1:1,10:11:33.11:919,33,0	0/0:36,0:36:99:0,105,2048	0/0:31,0:31:90.29:0,90,1761	0/0:20,0:20:60.21:0,60,1198	0/0:39,0:39:99:0,114,2240	1/1:2,39:44:51.46:2958,51,0	1/1:7,16:24:51.18:1420,51,0	1/1:3,12:15:33.11:922,33,0	0/0:27,0:27:78.24:0,78,1487	0/0:17,0:17:48.15:0,48,924	0/0:45,0:45:99:0,132,2552	0/0:26,0:26:78.26:0,78,1504	0/0:10,0:10:30.10:0,30,579	0/0:30,0:30:90.27:0,90,1757	1/1:1,17:18:48.08:1213,48,0	1/1:3,20:25:75.23:1969,75,0	0/0:29,0:29:87.27:0,87,1699	1/1:4,7:12:33.11:892,33,0
chr10	47680499	.	T	TA	718.67	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-3.944;DP=737;FS=1.532;HRun=8;HaplotypeScore=77.4825;InbreedingCoeff=0.9691;MQ=78.11;MQ0=0;MQRankSum=-2.863;QD=24.78;ReadPosRankSum=1.507;VQSLOD=4.4466;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,26:29:72.13:814,72,0	0/0:11,0:11:27:0,27,247	0/0:32,0:30:63.01:0,63,630	0/0:27,0:28:47.58:0,48,417	0/0:31,0:31:81.02:0,81,736	0/0:36,0:36:80.39:0,80,807	0/0:26,0:26:72.02:0,72,654	0/0:34,0:34:80.97:0,81,726	0/0:25,0:25:66.10:0,66,622	0/0:24,0:24:72.02:0,72,652	0/0:24,0:24:63.03:0,63,576	0/0:28,0:28:75.02:0,75,681	0/0:29,0:29:74.94:0,75,677	0/0:34,1:35:67.42:0,67,865	0/0:34,0:34:99:0,99,906	0/0:23,0:23:69.04:0,69,632	0/0:34,0:34:90.02:0,90,818	0/0:20,0:20:56.98:0,57,507	0/0:18,0:18:48.01:0,48,435	0/0:23,0:23:66.02:0,66,599	0/0:24,0:24:66.03:0,66,604	0/0:26,0:26:69.03:0,69,631	0/0:25,0:25:69.01:0,69,624	0/0:36,0:37:99:0,110,990	0/0:16,0:16:48.03:0,48,439	0/0:23,0:23:54.01:0,54,489	0/0:38,0:38:99:0,102,915	0/0:4,0:4:12.01:0,12,110
chr10	47681253	.	T	TAAGACAGAAACAA	16268.65	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=0.964;DP=621;FS=2.945;HRun=0;HaplotypeScore=224.9493;InbreedingCoeff=0.9960;MQ=85.29;MQ0=0;MQRankSum=-14.766;QD=117.89;ReadPosRankSum=-2.924;VQSLOD=4.1894;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,123,4464	0/0:9,0:9:27.05:0,27,801	0/0:25,0:25:54.15:0,54,1418	0/0:28,0:28:39.13:0,39,1349	0/0:25,0:25:66.23:0,66,2469	0/0:19,0:19:54.15:0,54,1766	0/0:16,0:16:30.10:0,30,1120	0/0:21,0:21:57.20:0,57,1837	1/1:15,6:23:48.12:2510,48,0	0/0:25,0:25:66.23:0,66,2424	0/0:14,0:14:27.09:0,27,1030	1/1:15,12:27:60.21:3278,60,0	1/1:16,10:26:63.22:3276,63,0	0/0:26,0:26:63.21:0,63,2252	0/0:22,0:22:54.18:0,54,1967	0/0:23,0:23:45.63:0,46,1677	0/0:21,0:21:33.11:0,33,1194	0/0:15,0:15:36.12:0,36,1294	0/0:15,0:15:30.09:0,30,906	0/0:25,0:25:60.19:0,60,2157	0/0:33,0:32:75.26:0,75,2604	1/1:15,7:23:54.10:2366,54,0	1/1:13,7:21:54.18:2804,54,0	1/1:9,9:18:36.12:2035,36,0	0/0:19,0:19:51.18:0,51,1897	0/0:29,0:29:75.25:0,75,2713	0/0:21,0:21:42.14:0,42,1544	0/0:6,0:6:15.05:0,15,572
chr10	47683206	.	TAC	T	523.92	PASS	AB=0.971;AC=18;AF=0.360;AN=50;BaseQRankSum=-1.498;DP=575;FS=13.530;HRun=0;HaplotypeScore=99.4521;InbreedingCoeff=0.3671;MQ=63.21;MQ0=17;MQRankSum=2.996;QD=2.13;ReadPosRankSum=4.331;VQSLOD=0.9351;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:25,1:23:10.88:80,11,0	0/0:9,0:9:5.34:0,5,68	./.	./.	0/0:21,0:20:4.24:0,4,27	0/1:18,0:17:15.17:15,0,114	0/0:22,0:22:0.26:0,0,115	0/0:23,0:23:7.62:0,8,41	0/0:20,0:18:7.57:0,8,88	0/0:25,0:22:17.66:0,18,120	./.	0/1:18,0:17:22.25:22,0,37	0/0:18,0:18:9:0,9,82	1/1:19,0:18:11.89:97,12,0	0/1:20,3:23:39.65:40,0,212	0/1:41,0:39:3.98:4,0,47	0/0:21,0:21:2.47:0,2,38	0/0:19,0:18:17.63:0,18,161	1/1:18,0:18:3.73:39,4,0	1/1:15,2:17:17.58:132,18,0	1/1:17,0:16:2.92:17,3,0	0/0:19,1:20:10.15:0,10,98	0/0:19,0:19:2.54:0,3,82	0/0:21,0:19:13.99:0,14,179	1/1:22,0:22:1.55:4,2,0	0/0:10,0:9:17.93:0,18,159	1/1:24,3:26:18.69:231,19,0	0/0:3,0:3:2.84:0,3,14
chr10	47683244	.	C	CACACAT	1065.37	PASS	AB=0.989;AC=18;AF=0.321;AN=56;BaseQRankSum=3.326;DP=678;FS=16.117;HRun=0;HaplotypeScore=182.3993;InbreedingCoeff=-0.0026;MQ=48.42;MQ0=28;MQRankSum=0.587;QD=2.80;ReadPosRankSum=0.909;VQSLOD=1.9985;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:34:7.97:0,8,124	0/0:12,0:12:35.98:0,36,361	0/0:13,0:2:2.99:0,3,24	0/0:17,0:7:6.51:0,7,88	1/1:24,0:23:5.07:146,5,0	0/0:33,0:31:48.48:0,48,542	0/1:25,0:25:5.05:5,0,332	0/0:16,0:16:36.76:0,37,236	0/1:25,0:23:4.67:5,0,139	0/1:30,0:26:88.11:156,0,88	1/1:16,0:13:0.47:1,0,0	0/0:26,0:25:31.63:0,32,198	0/1:26,0:26:26.72:27,0,92	0/0:17,0:16:28.21:0,28,232	0/0:29,0:28:53.81:0,54,618	0/1:37,6:42:5.10:344,0,5	0/1:19,0:18:28.24:28,0,35	0/1:24,0:23:55.06:140,0,55	0/0:22,0:19:26.47:0,26,195	0/0:25,0:24:4.63:0,5,127	0/0:24,0:22:29.51:0,30,220	0/1:27,0:26:32.60:33,0,156	0/1:25,0:25:17.55:18,0,91	0/1:30,0:29:1.87:2,0,151	0/1:32,0:30:1.92:2,0,4	0/1:23,0:22:69.31:167,0,69	0/0:27,0:27:61.45:0,61,526	1/1:10,0:10:22.71:146,23,0
chr10	47683250	.	CACAT	C	4272	PASS	AB=0.975;AC=31;AF=0.554;AN=56;BaseQRankSum=3.660;DP=705;FS=17.829;HRun=0;HaplotypeScore=155.7798;InbreedingCoeff=0.0439;MQ=49.48;MQ0=25;MQRankSum=2.886;QD=7.39;ReadPosRankSum=-4.206;VQSLOD=1.5059;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:38,0:35:20.22:155,20,0	0/0:13,0:13:10.90:0,11,377	0/0:16,0:5:10.26:0,10,81	0/0:19,0:10:4.30:0,4,80	0/1:25,0:24:2.90:153,0,3	0/0:34,0:32:26.52:0,27,682	0/1:26,0:26:7.02:7,0,334	1/1:18,0:18:34.90:309,35,0	0/1:25,1:24:39.21:172,0,39	0/1:31,0:27:68.04:232,0,68	0/0:15,0:12:0.47:0,0,1	1/1:25,1:25:14.07:246,14,0	0/1:23,3:26:54.89:201,0,55	1/1:16,0:15:29.31:217,29,0	0/0:30,0:29:44.71:0,45,621	1/1:43,2:43:8.67:408,9,0	0/1:19,0:18:56.05:56,0,82	0/1:25,0:24:24.93:25,0,252	0/1:24,0:21:1.18:222,0,1	1/1:24,0:23:17.01:125,17,0	1/1:24,0:22:29.96:249,30,0	0/1:25,3:27:79.17:244,0,79	0/1:25,1:26:83.55:143,0,84	0/1:31,2:32:99:217,0,157	0/1:33,0:31:8:40,0,8	0/1:24,0:23:99:162,0,196	1/1:31,0:31:75.04:576,75,0	1/1:10,0:10:8.84:112,9,0
chr10	47683252	.	CAT	C	4741.71	PASS	AB=0.988;AC=36;AF=0.643;AN=56;BaseQRankSum=4.592;DP=720;FS=23.472;HRun=0;HaplotypeScore=140.9671;InbreedingCoeff=0.0217;MQ=49.93;MQ0=25;MQRankSum=2.310;QD=7.43;ReadPosRankSum=-2.606;VQSLOD=2.4866;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:40,0:37:20.22:124,20,0	0/0:13,0:13:10.88:0,11,285	0/0:20,0:8:9.41:0,9,97	0/1:22,0:12:12.39:12,0,95	1/1:19,6:24:20.10:173,20,0	0/0:34,0:32:29.01:0,29,483	0/1:26,0:26:7.42:7,0,286	1/1:20,0:20:40.56:361,41,0	0/1:27,0:25:10.58:214,0,11	0/1:26,4:26:13.05:239,0,13	0/0:15,0:12:0.47:0,0,1	1/1:26,0:25:14.48:247,14,0	1/1:28,0:28:5.61:267,6,0	1/1:18,0:17:35.30:266,35,0	0/1:29,0:28:3.77:4,0,403	1/1:44,0:42:44.78:445,45,0	0/1:18,0:18:54.18:74,0,54	0/1:26,0:25:47.06:47,0,169	0/1:26,0:23:4.55:223,0,5	1/1:22,0:21:17.17:116,17,0	1/1:24,0:22:32.87:273,33,0	1/1:28,0:27:2.19:295,2,0	0/1:26,0:26:42.70:164,0,43	0/1:32,1:32:78.22:260,0,78	0/1:34,0:32:8:40,0,8	0/1:24,0:23:65.07:208,0,65	1/1:32,0:32:84.85:582,85,0	1/1:2,8:10:1.47:101,1,0
chr10	47683254	.	T	TAC	2456.53	PASS	AB=0.851;AC=33;AF=0.589;AN=56;BaseQRankSum=7.218;DP=712;FS=37.758;HRun=0;HaplotypeScore=151.2139;InbreedingCoeff=0.6000;MQ=50.49;MQ0=25;MQRankSum=-0.899;QD=5.19;ReadPosRankSum=0.722;VQSLOD=1.6782;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:37:8.13:0,8,33	0/0:13,0:13:33.10:0,33,394	0/0:19,0:8:20.85:0,21,200	0/0:23,0:13:26.91:0,27,279	1/1:21,2:22:15.59:347,16,0	0/0:30,0:28:59.19:0,59,669	0/0:27,0:27:37.51:0,38,421	1/1:18,0:18:7.88:55,8,0	1/1:27,0:25:19.91:122,20,0	0/1:30,0:26:3.55:398,0,4	0/1:5,9:11:0:0,0,0	1/1:26,0:25:4.85:23,5,0	1/1:28,0:28:20.53:111,21,0	1/1:17,0:16:0.01:0,0,0	0/0:29,0:28:51.51:0,52,542	1/1:41,0:41:25.88:140,26,0	1/1:7,11:19:9.03:107,9,0	0/1:11,13:23:84.03:172,0,84	0/1:11,0:23:1.56:3,0,2	0/0:9,0:21:0.47:0,0,1	1/1:24,0:22:4.18:28,4,0	1/1:30,0:29:22.65:153,23,0	1/1:26,0:26:15.56:71,16,0	1/1:32,0:31:25.05:124,25,0	0/0:18,17:33:3.01:0,3,35	1/1:11,13:23:28.73:507,29,0	0/1:30,0:32:13.10:13,0,23	1/1:10,0:10:18.06:268,18,0
chr10	47687142	.	TC	T	835.10	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.586;DP=729;FS=6.530;HRun=3;HaplotypeScore=72.0868;InbreedingCoeff=0.9999;MQ=94.24;MQ0=0;MQRankSum=-3.499;QD=32.12;ReadPosRankSum=0.035;VQSLOD=3.6882;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:81.27:0,81,1165	0/0:17,0:17:51.17:0,51,733	0/0:32,0:32:92.46:0,92,1235	0/0:33,0:33:93.27:0,93,1241	0/0:30,0:30:90.30:0,90,1289	0/0:30,0:30:81.27:0,81,1162	0/0:22,0:22:60.19:0,60,846	0/0:31,0:31:81.26:0,81,1150	0/0:18,0:18:54.18:0,54,778	0/0:39,0:39:99:0,114,1641	0/0:22,0:22:64.77:0,65,910	0/0:23,0:23:69.23:0,69,992	0/0:29,0:29:84.28:0,84,1201	0/0:25,0:25:75.25:0,75,1080	0/0:23,0:23:66.22:0,66,951	1/1:0,26:26:75.24:930,75,0	0/0:22,0:22:60.19:0,60,841	0/0:23,0:23:69.22:0,69,975	0/0:28,0:28:77.48:0,77,1115	0/0:26,0:26:78.26:0,78,1119	0/0:35,0:35:99:0,105,1484	0/0:23,0:23:66.22:0,66,950	0/0:28,0:28:84.23:0,84,1136	0/0:23,0:23:66.22:0,66,944	0/0:26,0:26:78.26:0,78,1123	0/0:26,0:26:78.26:0,78,1120	0/0:30,0:30:87.28:0,87,1231	0/0:12,0:12:36.12:0,36,518
chr10	47688103	.	A	AGAACC	4146.90	PASS	AB=0.671;AC=10;AF=0.179;AN=56;BaseQRankSum=-0.207;DP=555;FS=31.329;HRun=0;HaplotypeScore=111.5923;InbreedingCoeff=-0.2330;MQ=46.21;MQ0=33;MQRankSum=-3.453;QD=18.03;ReadPosRankSum=3.830;VQSLOD=1.1886;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:10,10:19:99:164,0,292	0/0:13,0:12:29.93:0,30,466	0/0:43,0:8:12.71:0,13,206	0/0:33,0:5:3.03:0,3,90	0/1:16,1:35:99:503,0,123	0/0:15,0:17:40.66:0,41,711	0/0:20,0:22:23.03:0,23,571	0/0:27,0:27:65.58:0,66,1009	0/0:4,0:3:9.03:0,9,122	0/1:11,9:22:99:604,0,100	0/1:10,2:28:99:571,0,227	0/0:8,0:7:18.06:0,18,290	0/0:10,0:9:23.97:0,24,253	0/0:13,0:13:33.11:0,33,604	0/0:20,0:19:42.96:0,43,675	0/1:15,1:14:99:476,0,108	0/1:8,8:17:99:388,0,118	0/1:9,4:14:99:226,0,197	0/0:19,0:19:54.18:0,54,988	0/0:28,0:28:76.05:0,76,1161	0/0:10,0:9:24.04:0,24,424	0/0:8,0:7:15.03:0,15,225	0/0:17,0:16:39.12:0,39,597	0/0:9,0:6:9.03:0,9,155	0/1:8,0:25:76.11:273,0,76	0/1:21,12:36:99:877,0,435	0/0:24,0:23:56.59:0,57,816	0/1:3,0:6:19.41:64,0,19
chr10	47689057	.	GAAGTA	G	1086.38	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-0.435;DP=636;FS=9.561;HRun=0;HaplotypeScore=152.5926;InbreedingCoeff=0.9898;MQ=80.35;MQ0=0;MQRankSum=-4.673;QD=37.46;ReadPosRankSum=-2.745;VQSLOD=2.4550;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:93.32:0,93,2879	0/0:11,0:11:33.11:0,33,1030	0/0:11,0:11:27.05:0,27,743	0/0:20,0:20:51.17:0,51,1425	0/0:18,0:18:51.18:0,51,1507	0/0:33,0:33:90.31:0,90,2783	0/0:33,0:33:99:0,99,3060	1/1:7,22:29:60.18:1181,60,0	0/0:14,0:14:33.11:0,33,1023	0/0:20,0:20:57.20:0,57,1760	0/0:8,0:8:24.08:0,24,671	0/0:26,0:26:69.24:0,69,2153	0/0:24,0:24:69.24:0,69,2124	0/0:32,0:32:96.28:0,96,2786	0/0:20,0:20:57.20:0,57,1749	0/0:15,0:15:39.13:0,39,1204	0/0:40,0:40:99:0,120,3643	0/0:35,0:35:96.31:0,96,2815	0/0:20,0:20:57.20:0,57,1688	0/0:10,0:10:30.10:0,30,854	0/0:51,0:50:99:0,138,4165	0/0:15,0:15:36.12:0,36,1083	0/0:7,0:7:21.07:0,21,657	0/0:33,0:33:87.30:0,87,2681	0/0:26,0:26:69.24:0,69,2125	0/0:27,0:27:81.28:0,81,2460	0/0:18,0:17:51.18:0,51,1592	0/0:8,0:8:24.08:0,24,740
chr10	47689071	.	G	GC	13185.12	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=-15.028;DP=649;FS=0.975;HRun=3;HaplotypeScore=68.4321;InbreedingCoeff=0.9910;MQ=78.44;MQ0=0;MQRankSum=1.446;QD=35.93;ReadPosRankSum=3.826;VQSLOD=5.4637;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,28:29:78.26:1092,78,0	0/0:12,0:12:36.07:0,36,416	0/0:11,0:11:13.81:0,14,130	0/0:17,0:17:18.71:0,19,265	1/1:0,19:19:45.15:630,45,0	0/0:31,0:31:84.22:0,84,983	0/0:34,0:34:96.29:0,96,1151	0/0:25,0:25:65.54:0,66,724	1/1:1,12:13:30.10:420,30,0	1/1:0,21:21:63.12:806,63,0	1/1:1,6:7:11.87:140,12,0	1/1:2,30:32:81.27:1132,81,0	1/1:3,22:25:60.20:840,60,0	0/0:32,1:33:42.45:0,42,891	0/0:19,0:19:54.15:0,54,636	1/1:3,14:17:30.10:420,30,0	1/1:4,39:43:99:1596,114,0	1/1:0,34:34:99:1428,102,0	0/0:23,0:23:66.20:0,66,789	0/0:10,0:10:24.06:0,24,276	0/0:50,0:49:99:0,135,1586	1/1:2,14:16:33.11:462,33,0	1/1:0,14:14:39.13:545,39,0	1/1:1,31:32:87.29:1218,87,0	1/1:1,25:26:63.21:881,63,0	1/1:0,30:30:90.24:1204,90,0	0/0:17,0:16:47.51:0,48,548	1/1:0,9:9:27.09:371,27,0
chr10	47690024	.	T	TA	13667.74	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=2.456;DP=655;FS=0.318;HRun=6;HaplotypeScore=79.5770;InbreedingCoeff=0.9953;MQ=76.70;MQ0=0;MQRankSum=-5.215;QD=31.71;ReadPosRankSum=2.445;VQSLOD=5.2244;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,30:30:87.28:1092,87,0	0/0:5,0:5:12.03:0,12,122	0/0:26,0:26:57.06:0,57,553	0/0:20,0:20:45.96:0,46,449	1/1:5,33:38:93.30:1169,93,0	0/0:19,0:19:48.11:0,48,490	0/0:18,0:18:45.09:0,45,452	1/1:5,31:36:93.22:1097,93,0	1/1:3,16:19:39.12:491,39,0	1/1:1,21:22:60.19:755,60,0	1/1:1,22:23:63.09:755,63,0	1/1:0,11:11:30.10:377,30,0	1/1:4,17:21:57.18:707,57,0	0/0:23,0:23:66.14:0,66,667	0/0:19,0:19:54.12:0,54,551	1/1:4,22:26:60.12:755,60,0	1/1:1,30:31:87.28:1094,87,0	1/1:2,11:13:27.09:340,27,0	0/0:22,0:22:63.14:0,63,643	0/0:29,0:29:78.17:0,78,796	0/0:17,0:17:48.09:0,48,481	1/1:0,18:18:54.09:658,54,0	1/1:8,26:34:65.93:811,66,0	1/1:1,24:25:57.18:717,57,0	1/1:1,27:28:66.16:811,66,0	1/1:2,37:39:99:1396,111,0	0/0:26,0:26:69.15:0,69,704	1/1:0,17:17:51.16:642,51,0
chr10	47690378	.	GAAAA	G	2598.76	PASS	AB=1.000;AC=20;AF=0.357;AN=56;BaseQRankSum=6.408;DP=493;FS=0.000;HRun=6;HaplotypeScore=104.7618;InbreedingCoeff=0.6064;MQ=48.69;MQ0=11;MQRankSum=-3.519;QD=13.97;ReadPosRankSum=-0.370;VQSLOD=-0.4991;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:44.76:0,45,620	0/1:11,0:11:78.37:78,0,94	0/0:15,0:4:10.97:0,11,73	0/0:13,0:5:11.99:0,12,104	1/1:14,2:16:31.91:300,32,0	0/1:18,0:18:67.34:67,0,192	0/0:19,0:18:19.98:0,20,215	0/0:28,0:26:54.02:0,54,636	0/0:14,0:14:10.27:0,10,204	1/1:11,1:12:22.65:311,23,0	1/1:12,4:16:18.33:262,18,0	0/0:23,0:21:8.81:0,9,170	0/0:15,0:14:0.36:0,0,160	0/0:13,0:13:37.32:0,37,681	0/1:19,0:18:98.21:98,0,124	0/1:19,0:19:30.97:31,0,152	1/1:16,0:16:36.71:243,37,0	1/1:14,1:14:5.81:192,6,0	0/0:18,0:17:39.08:0,39,535	0/0:25,0:25:71.99:0,72,925	0/0:11,0:11:23.97:0,24,194	0/0:22,0:21:33.86:0,34,338	0/0:20,0:20:28.57:0,29,282	0/0:22,0:22:36.33:0,36,350	1/1:11,2:13:11.93:203,12,0	1/1:13,5:18:53.77:574,54,0	0/0:19,0:17:47.92:0,48,557	1/1:5,8:12:33.03:439,33,0
chr10	47690381	.	AAAAG	A	1976.20	PASS	AB=1.000;AC=30;AF=0.600;AN=50;BaseQRankSum=2.150;DP=499;FS=1.397;HRun=0;HaplotypeScore=115.4863;InbreedingCoeff=0.5293;MQ=49.34;MQ0=12;MQRankSum=-2.124;QD=6.98;ReadPosRankSum=3.213;VQSLOD=2.6256;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:33.09:0,33,424	1/1:6,5:11:18.06:272,18,0	./.	./.	1/1:16,0:16:9.87:79,10,0	1/1:9,9:18:18.06:272,18,0	1/1:9,0:15:8.35:58,8,0	./.	1/1:14,0:14:9.01:84,9,0	0/1:12,0:12:20.83:21,0,21	0/1:15,0:15:21.75:22,0,23	1/1:23,0:21:9.01:82,9,0	1/1:14,0:13:12.01:110,12,0	0/0:13,0:13:24.08:0,24,514	1/1:7,11:17:24.08:363,24,0	1/1:19,0:19:23.98:228,24,0	0/0:16,0:17:8.87:0,9,57	0/1:16,0:15:18.87:19,0,20	0/0:16,0:21:30.08:0,30,425	0/0:16,0:24:30.10:0,30,519	0/0:11,0:11:5.98:0,6,54	1/1:21,0:20:8.98:73,9,0	1/1:18,0:18:5.99:50,6,0	0/0:21,0:22:0:0,0,0	0/1:17,0:17:33.80:34,0,103	1/1:19,0:19:7.95:136,8,0	0/0:12,0:21:18.06:0,18,282	1/1:16,0:15:32.21:256,32,0
chr10	47690387	.	A	AT	695.83	PASS	AB=0.795;AC=5;AF=0.089;AN=56;BaseQRankSum=6.134;DP=492;FS=0.000;HRun=0;HaplotypeScore=99.8818;InbreedingCoeff=-0.1125;MQ=50.16;MQ0=11;MQRankSum=-1.194;QD=9.16;ReadPosRankSum=-4.042;VQSLOD=2.6228;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:79.99:0,80,1076	0/0:10,0:10:26.58:0,27,229	0/0:15,0:4:8.39:0,8,92	0/0:12,0:5:12.04:0,12,165	0/0:15,0:15:45.09:0,45,563	0/0:17,0:17:41.63:0,42,439	0/0:16,0:15:32.63:0,33,400	0/0:32,0:22:66.21:0,66,906	0/0:15,0:15:11.77:0,12,306	0/1:11,1:12:14.82:15,0,360	0/1:13,2:15:99:101,0,361	0/0:21,0:21:6.05:0,6,323	0/0:13,0:12:25.72:0,26,367	0/0:14,0:14:39.13:0,39,544	0/0:18,0:18:44.46:0,44,416	0/0:21,0:21:42.06:0,42,488	0/1:10,7:17:99:177,0,289	0/1:12,3:14:94.70:95,0,330	0/0:21,0:19:53.86:0,54,647	0/0:23,0:23:69.12:0,69,835	0/0:12,0:12:30.09:0,30,403	0/0:19,0:19:17.99:0,18,546	0/0:15,0:15:5.35:0,5,389	0/0:20,0:20:46.58:0,47,603	0/1:7,10:17:99:424,0,178	0/0:22,0:22:57.30:0,57,691	0/0:19,0:18:38.32:0,38,430	0/0:17,0:16:42.59:0,43,400
chr10	47690426	.	AAAGAAAGAAAGAAAAT	A	7593.96	PASS	AB=1.000;AC=24;AF=0.429;AN=56;BaseQRankSum=-1.348;DP=518;FS=2.721;HRun=0;HaplotypeScore=225.4565;InbreedingCoeff=0.2617;MQ=54.13;MQ0=17;MQRankSum=2.371;QD=22.80;ReadPosRankSum=-2.481;VQSLOD=3.3198;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:28:99:448,0,1400	0/0:11,0:11:33.11:0,33,1229	0/1:6,0:2:3.11:3,0,39	0/0:5,0:3:9.03:0,9,225	0/1:16,0:16:99:277,0,479	0/0:19,0:19:45.15:0,45,1455	0/0:18,0:17:36.59:0,37,645	1/1:43,0:30:40.87:1181,41,0	0/1:15,0:15:99:116,0,117	0/1:15,0:15:99:241,0,158	0/1:14,0:14:99:359,0,212	1/1:3,16:19:9.03:423,9,0	1/1:0,14:14:12.04:565,12,0	0/0:13,0:13:39.13:0,39,2160	0/0:19,0:19:45.15:0,45,1572	0/0:19,0:19:27.53:0,28,391	0/1:20,0:20:99:458,0,294	1/1:15,0:15:36.82:481,37,0	0/0:26,0:22:57.19:0,57,2254	0/0:19,0:19:57.20:0,57,2796	0/0:15,0:15:42.10:0,42,1187	1/1:3,9:12:21.02:536,21,0	1/1:2,12:14:9.32:342,9,0	1/1:20,0:20:32.20:571,32,0	0/1:26,0:26:99:832,0,121	0/1:27,0:27:99:451,0,496	0/0:21,0:20:44.80:0,45,1757	0/1:28,0:27:99:310,0,800
chr10	47690430	.	AAAGAAAGAAAAT	A	10407.58	PASS	AB=1.000;AC=31;AF=0.554;AN=56;BaseQRankSum=2.703;DP=518;FS=3.373;HRun=0;HaplotypeScore=182.3515;InbreedingCoeff=0.4980;MQ=55.88;MQ0=17;MQRankSum=-0.716;QD=28.36;ReadPosRankSum=0.344;VQSLOD=4.3874;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:29:99:495,0,771	0/0:11,0:11:30.10:0,30,797	0/1:8,0:4:0.25:0,0,91	0/0:5,0:3:9.03:0,9,225	0/1:16,0:16:99:341,0,151	0/0:20,0:20:48.16:0,48,1080	0/1:17,0:16:17.50:17,0,379	1/1:43,0:30:78.01:1270,78,0	1/1:2,15:17:9:341,9,0	1/1:15,0:15:36.06:600,36,0	1/1:15,0:15:36.04:696,36,0	1/1:16,0:16:9.03:285,9,0	1/1:14,0:14:12.04:381,12,0	0/0:15,0:15:45.15:0,45,1794	0/0:19,0:19:48.16:0,48,1192	0/1:19,0:19:41.76:94,0,42	1/1:21,0:21:45.12:827,45,0	1/1:13,0:13:39.13:799,39,0	0/0:26,0:22:57.19:0,57,1836	0/0:19,0:19:54.18:0,54,2047	0/0:15,0:15:39.09:0,39,878	1/1:9,0:9:21.02:398,21,0	1/1:12,0:12:9.93:252,10,0	1/1:18,0:18:35.84:574,36,0	1/1:26,0:26:66.22:1588,66,0	0/1:27,0:27:20.51:776,0,21	0/0:21,0:20:45.08:0,45,1368	0/1:31,0:30:82.43:673,0,82
chr10	47690434	.	AAAGAAAAT	A	12079.30	PASS	AB=1.000;AC=34;AF=0.607;AN=56;BaseQRankSum=3.140;DP=517;FS=0.000;HRun=0;HaplotypeScore=145.4916;InbreedingCoeff=0.8114;MQ=61.63;MQ0=14;MQRankSum=-1.368;QD=34.51;ReadPosRankSum=1.774;VQSLOD=4.6265;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:31,0:30:99:605,0,331	0/0:11,0:11:33.10:0,33,478	0/0:11,0:7:8.27:0,8,209	0/0:7,0:5:15.05:0,15,308	1/1:17,0:17:40.36:668,40,0	0/0:20,0:20:48.16:0,48,715	0/1:15,0:15:41.87:42,0,357	1/1:39,0:31:81.13:1322,81,0	1/1:15,0:15:8.78:204,9,0	1/1:14,1:15:42.14:762,42,0	1/1:9,4:13:30.10:496,30,0	1/1:16,0:16:9.03:201,9,0	1/1:14,0:14:12.04:269,12,0	0/0:17,0:17:51.17:0,51,1476	0/0:19,0:19:48.15:0,48,719	1/1:1,18:19:23.75:675,24,0	1/1:19,0:19:48.16:764,48,0	1/1:14,1:15:45.15:726,45,0	0/0:28,0:25:66.23:0,66,1596	0/0:18,0:18:51.17:0,51,1445	0/0:15,0:15:42.10:0,42,766	1/1:9,0:9:21.02:314,21,0	1/1:12,0:12:11.49:197,11,0	1/1:20,0:20:41.10:658,41,0	1/1:23,2:25:72.24:1231,72,0	1/1:26,0:26:75.25:1385,75,0	0/0:21,0:20:45.15:0,45,1059	1/1:30,0:29:38.29:1559,38,0
chr10	47690438	.	AAAAT	A	10805.31	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=4.591;DP=526;FS=0.000;HRun=0;HaplotypeScore=120.6871;InbreedingCoeff=0.9672;MQ=64.91;MQ0=8;MQRankSum=-1.469;QD=32.06;ReadPosRankSum=2.334;VQSLOD=4.8072;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:30:31.48:774,31,0	0/0:11,0:11:21.83:0,22,272	0/0:12,0:8:11.28:0,11,259	0/0:9,0:7:21.07:0,21,402	1/1:14,2:16:39.09:566,39,0	0/0:21,0:21:47.83:0,48,639	0/0:15,0:15:29.30:0,29,423	1/1:7,30:34:90.30:1469,90,0	1/1:15,0:15:8.95:121,9,0	1/1:17,0:17:47.90:812,48,0	1/1:14,0:14:31.92:490,32,0	1/1:16,0:16:9.03:119,9,0	1/1:14,0:14:12.04:158,12,0	0/0:18,0:18:51.17:0,51,1048	0/0:19,0:19:40.94:0,41,456	1/1:18,0:18:23.91:318,24,0	1/1:20,0:20:51.14:716,51,0	1/1:16,0:16:48.15:687,48,0	0/0:30,0:29:72.25:0,72,1333	0/0:17,0:17:48.16:0,48,923	0/0:16,0:16:45.11:0,45,733	1/1:9,0:9:21.02:232,21,0	1/1:12,0:12:12.02:145,12,0	1/1:21,0:21:48.16:714,48,0	1/1:24,1:25:71.42:976,71,0	1/1:1,26:27:81.26:1282,81,0	0/0:21,0:20:42.14:0,42,736	1/1:21,8:28:62.16:1226,62,0
chr10	47694091	.	AC	A	2536.90	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=8.668;DP=490;FS=8.301;HRun=8;HaplotypeScore=48.6079;InbreedingCoeff=0.9367;MQ=81.13;MQ0=0;MQRankSum=-0.653;QD=21.50;ReadPosRankSum=-0.323;VQSLOD=3.2652;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:75.22:0,75,895	0/0:1,0:1:3.01:0,3,36	0/0:14,0:14:33.08:0,33,383	0/0:16,0:16:45.14:0,45,538	0/0:5,0:5:12.04:0,12,145	0/0:10,0:10:21.06:0,21,254	0/0:33,1:34:46.31:0,46,812	1/1:4,22:28:63.06:591,63,0	1/1:1,14:15:42.06:405,42,0	0/0:13,0:13:30.08:0,30,353	0/0:5,0:5:15.05:0,15,180	1/1:2,21:23:60.10:579,60,0	1/1:3,8:11:24.04:232,24,0	0/0:17,0:17:48.13:0,48,557	0/0:20,0:20:54.15:0,54,638	0/0:23,0:23:51.16:0,51,616	0/0:30,0:30:84.24:0,84,993	0/0:24,0:24:66.20:0,66,796	0/0:15,0:16:35.97:0,36,402	0/0:7,0:7:21.05:0,21,241	0/0:65,1:67:99:0,160,2107	1/1:0,6:6:18.03:174,18,0	1/1:3,6:9:18.02:173,18,0	1/1:2,24:26:60.09:579,60,0	0/0:11,0:11:30.09:0,30,360	0/0:9,0:9:21.06:0,21,254	0/0:14,0:14:39.12:0,39,471	0/0:3,0:3:6.02:0,6,72
chr10	47694230	.	GGGGGT	G	697.93	PASS	AB=1.000;AC=22;AF=0.478;AN=46;BaseQRankSum=1.630;DP=120;FS=0.000;HRun=0;HaplotypeScore=27.9850;InbreedingCoeff=0.1268;MQ=92.72;MQ0=1;MQRankSum=-1.304;QD=10.42;ReadPosRankSum=1.317;VQSLOD=1.0139;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,4:6:3.01:41,3,0	./.	0/1:6,0:5:25.21:25,0,88	0/0:15,0:11:1.44:0,1,181	0/1:3,0:3:41.24:46,0,41	0/0:4,0:4:9.03:0,9,102	0/0:6,0:6:12.02:0,12,125	0/1:8,0:8:13.87:14,0,121	1/1:2,5:7:9.03:174,9,0	./.	./.	1/1:4,0:4:6.02:82,6,0	1/1:3,3:6:3.01:59,3,0	0/0:2,0:2:6.02:0,6,68	0/0:2,0:2:3.01:0,3,34	0/1:7,0:7:5.55:127,0,6	0/1:6,0:6:15.20:15,0,34	0/1:7,0:7:30.27:105,0,30	0/0:3,0:3:3.01:0,3,34	0/0:1,0:1:3.01:0,3,89	0/0:12,0:12:17.98:0,18,188	1/1:3,0:3:3.01:40,3,0	1/1:2,0:2:6.02:81,6,0	./.	./.	1/1:1,0:1:2.96:19,3,0	0/0:3,0:3:3.01:0,3,33	1/1:1,0:1:2.80:13,3,0
chr10	47694235	.	TGGGGTG	T	369.23	PASS	AB=1.000;AC=11;AF=0.423;AN=26;BaseQRankSum=0.000;DP=107;FS=0.000;HRun=0;HaplotypeScore=29.8054;InbreedingCoeff=0.4334;MQ=89.90;MQ0=1;MQRankSum=-2.264;QD=8.21;ReadPosRankSum=1.177;VQSLOD=1.0603;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:6:0:0,0,0	./.	1/1:6,0:5:2.97:20,3,0	0/1:13,0:9:0.01:0,0,0	0/0:3,0:3:3.01:0,3,63	./.	./.	1/1:7,0:7:3.01:63,3,0	1/1:6,0:6:8.75:52,9,0	./.	./.	0/0:1,0:3:1.82:0,2,5	1/1:6,0:6:2.96:19,3,0	./.	./.	1/1:1,6:7:15.05:315,15,0	0/0:5,0:5:3.01:0,3,52	0/0:7,0:7:6.01:0,6,78	0/0:4,0:4:3.01:0,3,41	0/0:1,0:1:3.01:0,3,99	./.	./.	./.	./.	./.	./.	./.	./.
chr10	47696086	.	G	GA	11883.90	PASS	AB=0.625;AC=41;AF=0.732;AN=56;BaseQRankSum=-13.224;DP=585;FS=10.025;HRun=8;HaplotypeScore=56.4696;InbreedingCoeff=0.9052;MQ=81.44;MQ0=1;MQRankSum=-2.607;QD=28.36;ReadPosRankSum=4.360;VQSLOD=4.6793;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,18:19:54.16:623,54,0	1/1:1,3:4:9.03:104,9,0	0/0:27,1:25:30.17:0,30,301	0/0:31,0:27:58.96:0,59,503	1/1:6,22:28:69.04:732,69,0	1/1:0,23:23:66.20:759,66,0	0/1:4,6:10:9.41:155,0,9	1/1:7,28:35:84.19:928,84,0	1/1:0,16:16:39.12:450,39,0	1/1:1,20:21:60.02:661,60,0	1/1:2,20:22:51.15:588,51,0	1/1:0,13:13:33.10:381,33,0	1/1:4,18:22:51.15:589,51,0	0/0:27,0:27:71.97:0,72,646	1/1:2,19:21:51.15:589,51,0	1/1:2,12:15:14.64:403,15,0	1/1:4,16:20:45.13:519,45,0	1/1:0,19:19:54.16:622,54,0	0/0:23,0:24:59.05:0,59,524	0/0:20,0:20:50.99:0,51,457	0/0:21,0:21:45.02:0,45,412	1/1:2,18:20:54.12:608,54,0	1/1:0,17:17:45.13:520,45,0	1/1:1,19:19:57.17:658,57,0	1/1:5,24:29:63.19:727,63,0	1/1:5,22:27:66.18:750,66,0	0/0:15,0:15:45.02:0,45,412	1/1:1,17:18:45.13:519,45,0
chr10	47699144	.	T	TA	3185.32	PASS	AB=0.824;AC=23;AF=0.411;AN=56;BaseQRankSum=-4.633;DP=599;FS=5.357;HRun=13;HaplotypeScore=81.4940;InbreedingCoeff=0.3877;MQ=72.78;MQ0=1;MQRankSum=-2.766;QD=9.23;ReadPosRankSum=-1.191;VQSLOD=2.7715;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:13,33:49:51.38:559,51,0	0/0:13,2:15:1.85:0,2,157	0/0:19,0:17:19.64:0,20,125	0/0:14,0:12:9:0,9,51	1/1:6,17:24:40.08:342,40,0	0/0:23,0:23:53.43:0,53,370	0/1:8,4:12:74.43:74,0,111	0/1:20,1:22:34.97:35,0,83	0/0:16,0:18:31.58:0,32,205	0/1:17,6:26:27.96:152,0,28	1/1:4,10:16:15.09:251,15,0	0/0:15,1:19:3.79:0,4,163	0/0:20,2:23:24.06:0,24,306	0/1:21,3:25:54.73:55,0,232	0/0:24,1:27:27.64:0,28,326	0/1:6,9:16:14.30:154,0,14	1/1:11,20:34:12.57:377,13,0	1/1:2,14:16:27.03:251,27,0	0/1:23,2:25:23.96:24,0,236	0/0:10,0:10:11.79:0,12,78	0/0:16,0:17:34.72:0,35,232	0/0:15,0:16:24.77:0,25,155	0/1:13,2:15:34.64:35,0,98	0/0:16,1:20:0.26:0,0,195	1/1:5,19:24:41.86:366,42,0	1/1:5,17:23:27.31:384,27,0	0/0:30,1:32:26:0,26,386	1/1:8,9:17:21.50:324,21,0
chr10	47700521	.	T	TG	1480.03	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-10.301;DP=811;FS=3.701;HRun=5;HaplotypeScore=75.9160;InbreedingCoeff=0.9844;MQ=78.29;MQ0=0;MQRankSum=0.122;QD=34.42;ReadPosRankSum=-5.253;VQSLOD=1.4135;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,132,1408	0/0:16,0:16:48.07:0,48,490	0/0:22,0:22:51.05:0,51,510	0/0:19,0:19:44.47:0,44,453	0/0:33,0:33:93.23:0,93,998	0/0:35,0:35:90.17:0,90,942	0/0:30,0:30:90.19:0,90,944	1/1:2,41:42:99:1575,123,0	0/0:20,0:20:57.14:0,57,612	0/0:40,0:40:99:0,114,1215	0/0:28,0:28:81.17:0,81,848	0/0:32,0:32:93.23:0,93,999	0/0:35,0:35:96.18:0,96,1004	0/0:24,0:24:69.17:0,69,741	0/0:35,0:35:93.20:0,93,982	0/0:33,0:33:87.20:0,87,926	0/0:25,0:25:72.17:0,72,766	0/0:29,0:28:87.22:0,87,935	0/0:25,0:25:63.14:0,63,665	0/0:39,0:39:99:0,111,1181	0/0:30,0:30:84.12:0,84,863	0/0:37,0:36:99:0,102,1086	0/0:27,0:27:81.19:0,81,860	0/0:23,0:23:69.17:0,69,741	0/0:26,0:26:72.18:0,72,771	0/0:29,0:29:84.20:0,84,896	0/0:25,0:25:69.17:0,69,741	0/0:5,0:5:15.04:0,15,161
chr10	47703079	.	A	AT	471.30	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-5.125;DP=736;FS=4.990;HRun=6;HaplotypeScore=68.1871;InbreedingCoeff=0.9989;MQ=82.16;MQ0=0;MQRankSum=-2.387;QD=24.81;ReadPosRankSum=0.816;VQSLOD=3.8217;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,18:19:45.14:566,45,0	0/0:11,0:11:33.08:0,33,337	0/0:24,0:23:36.12:0,36,427	0/0:17,0:17:29.07:0,29,281	0/0:49,0:49:99:0,123,1254	0/0:26,0:26:75.17:0,75,765	0/0:16,0:16:39.08:0,39,397	0/0:40,0:40:99:0,99,1005	0/0:20,0:20:60.14:0,60,612	0/0:37,0:37:99:0,102,1041	0/0:23,0:23:66.11:0,66,658	0/0:28,0:28:81.18:0,81,825	0/0:29,0:29:87.20:0,87,887	0/0:30,0:30:72.09:0,72,706	0/0:35,0:35:99:0,102,1041	0/0:33,0:33:90.16:0,90,902	0/0:26,0:26:72.16:0,72,733	0/0:19,0:19:54.12:0,54,550	0/0:20,0:20:57.12:0,57,576	0/0:32,0:32:96.20:0,96,973	0/0:17,0:17:51.11:0,51,520	0/0:32,0:32:93.20:0,93,942	0/0:27,0:27:75.17:0,75,763	0/0:19,0:19:54.12:0,54,549	0/0:24,0:24:69.16:0,69,704	0/0:27,0:27:78.17:0,78,796	0/0:40,0:38:99:0,102,1041	0/0:16,0:16:45.10:0,45,459
chr10	47708986	.	A	AG	200.15	PASS	AC=6;AF=0.120;AN=50;BaseQRankSum=3.280;DP=503;FS=48.498;HRun=0;HaplotypeScore=72.2114;InbreedingCoeff=0.9003;MQ=50.09;MQ0=40;MQRankSum=-3.398;QD=8.01;ReadPosRankSum=1.959;VQSLOD=1.5414;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:41:59.92:0,60,550	0/0:4,0:4:11.97:0,12,103	0/0:44,0:6:10.81:0,11,95	0/0:45,0:7:7.83:0,8,62	0/0:25,0:24:50.51:0,51,337	0/0:16,0:16:26.98:0,27,233	0/0:19,0:18:50.73:0,51,432	0/0:24,0:21:37.06:0,37,263	1/1:3,4:6:17.96:161,18,0	0/0:22,0:20:56.25:0,56,412	0/0:16,0:16:43.13:0,43,314	./.	1/1:6,3:9:14.90:120,15,0	0/0:18,0:17:23.63:0,24,182	0/0:19,0:19:32.88:0,33,273	0/0:21,0:19:44.21:0,44,326	0/0:25,0:24:50.97:0,51,298	0/0:7,0:5:14.94:0,15,117	0/0:20,0:16:41.69:0,42,356	0/0:16,0:15:43.18:0,43,317	0/0:12,0:11:13.86:0,14,100	./.	./.	1/1:1,8:9:8.61:50,9,0	0/0:17,0:16:35.67:0,36,194	0/0:24,0:24:62.67:0,63,514	0/0:25,0:23:41.63:0,42,344	0/0:12,0:8:17.44:0,17,97
chr10	47708999	.	GA	G	2588.40	PASS	AB=0.703;AC=35;AF=0.795;AN=44;BaseQRankSum=-3.699;DP=519;FS=0.000;HRun=14;HaplotypeScore=71.1498;InbreedingCoeff=0.3614;MQ=59.23;MQ0=39;MQRankSum=-0.844;QD=6.64;ReadPosRankSum=2.434;VQSLOD=2.6450;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:14,26:39:35.12:74,0,35	0/0:3,1:4:1.25:0,1,3	0/0:60,1:15:13.22:0,13,120	0/0:57,1:14:19.33:0,19,110	1/1:20,6:25:36.05:224,36,0	1/1:15,3:18:28.58:187,29,0	1/1:19,2:21:25.97:246,26,0	1/1:18,0:22:10.25:44,10,0	./.	1/1:19,2:19:29.58:203,30,0	0/1:13,3:17:7.86:137,0,8	./.	./.	1/1:8,10:17:2.94:21,3,0	0/1:10,8:18:31.70:32,0,40	1/1:19,2:19:34.07:211,34,0	1/1:22,5:26:39.52:273,40,0	1/1:9,0:7:14.84:102,15,0	1/1:18,1:15:13.74:129,14,0	1/1:8,9:17:18.21:151,18,0	1/1:6,6:11:2.67:20,3,0	./.	./.	./.	1/1:14,2:16:0.75:136,1,0	1/1:24,1:25:39.45:316,39,0	1/1:10,14:22:5.62:40,6,0	1/1:10,2:10:26.65:177,27,0
chr10	47709367	.	AAGAAACCTACCCTGGTTAT	A	26369.59	PASS	AB=0.905;AC=42;AF=0.955;AN=44;BaseQRankSum=-3.972;DP=334;FS=1.380;HRun=0;HaplotypeScore=234.0895;InbreedingCoeff=-0.0641;MQ=70.95;MQ0=0;MQRankSum=-3.465;QD=78.95;ReadPosRankSum=3.581;VQSLOD=4.5119;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,9:14:21.07:1071,21,0	1/1:4,6:10:12.04:637,12,0	0/1:8,1:9:95.19:166,0,95	0/1:9,1:10:67.10:198,0,67	1/1:8,12:20:32.58:1673,33,0	1/1:10,22:32:51.18:2709,51,0	1/1:9,9:18:12.04:615,12,0	1/1:11,12:23:36.12:1500,36,0	./.	1/1:8,9:17:27.09:1366,27,0	1/1:3,11:14:24.08:1230,24,0	./.	./.	1/1:2,12:14:33.11:1753,33,0	1/1:5,20:25:45.15:2386,45,0	1/1:2,10:12:24.08:1274,24,0	1/1:4,9:13:12.04:636,12,0	1/1:1,5:5:9.03:478,9,0	1/1:6,6:12:18.06:727,18,0	1/1:3,12:15:33.11:1710,33,0	1/1:3,5:8:9.03:478,9,0	./.	./.	./.	1/1:8,10:17:18.06:957,18,0	1/1:5,15:20:45.14:2257,45,0	1/1:2,17:19:41.99:2231,42,0	1/1:3,2:5:6.02:319,6,0
chr10	47709534	.	CA	C	2012.76	PASS	AB=0.685;AC=20;AF=0.455;AN=44;BaseQRankSum=1.637;DP=433;FS=2.889;HRun=16;HaplotypeScore=71.2368;InbreedingCoeff=0.0029;MQ=77.81;MQ0=4;MQRankSum=0.531;QD=6.64;ReadPosRankSum=2.124;VQSLOD=3.0077;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:10,12:21:42.72:125,0,43	0/0:5,0:7:7.45:0,7,59	0/0:39,0:18:17.47:0,17,117	0/0:23,0:16:4.46:0,4,68	0/1:7,18:26:1.47:208,0,1	0/0:18,1:23:44.27:0,44,432	0/0:15,0:16:38.76:0,39,307	0/1:14,12:28:4.41:175,0,4	./.	0/1:6,14:21:36.70:198,0,37	0/1:12,9:22:13.28:147,0,13	./.	./.	0/1:14,3:17:27.68:66,0,28	0/0:18,2:20:8.56:0,9,260	1/1:7,12:21:19.96:220,20,0	1/1:8,8:17:40.23:238,40,0	0/1:7,9:18:5.79:120,0,6	1/1:6,10:16:11.96:176,12,0	0/1:8,8:18:25.96:77,0,26	0/1:4,3:7:32.43:39,0,32	./.	./.	./.	0/1:11,9:20:62.70:108,0,63	1/1:12,5:19:18.55:101,19,0	0/1:12,11:24:3.97:163,0,4	0/1:5,0:6:0.85:1,0,17
chr10	47711466	.	C	CAA	2354.57	PASS	AB=0.890;AC=27;AF=0.482;AN=56;BaseQRankSum=1.377;DP=597;FS=0.000;HRun=16;HaplotypeScore=101.1353;InbreedingCoeff=0.4030;MQ=60.47;MQ0=13;MQRankSum=-2.450;QD=5.29;ReadPosRankSum=-0.174;VQSLOD=-0.0000;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:11,1:23:14.12:98,0,14	0/0:6,0:8:19.33:0,19,115	0/1:57,0:17:2.61:3,0,19	0/1:46,0:19:3.58:4,0,36	1/1:11,14:26:24.64:237,25,0	0/0:17,0:19:8.68:0,9,184	0/0:18,0:19:29.90:0,30,211	0/1:13,0:23:3.31:110,0,3	0/0:10,0:10:18.64:0,19,110	1/1:8,16:24:37.13:334,37,0	1/1:10,14:26:38.47:377,38,0	0/1:14,0:14:13.84:14,0,155	0/1:14,0:16:15.16:15,0,41	0/1:11,0:13:25.44:78,0,25	0/0:13,0:13:29.70:0,30,214	1/1:16,0:16:19.16:186,19,0	1/1:14,0:20:15.75:99,16,0	1/1:18,0:18:38.13:307,38,0	0/0:16,0:13:24.32:0,24,169	0/0:23,0:26:7.01:0,7,154	0/0:11,0:13:7.88:0,8,109	0/0:12,0:14:14.68:0,15,175	0/1:18,0:21:9.64:10,0,157	0/0:13,0:13:11.75:0,12,83	1/1:13,0:19:23.93:230,24,0	1/1:22,3:26:14.87:361,15,0	0/1:38,0:42:5.30:5,0,282	1/1:8,2:10:8.39:82,8,0
chr10	47711840	.	G	GA	498.92	PASS	AB=0.990;AC=4;AF=0.071;AN=56;BaseQRankSum=-2.319;DP=699;FS=0.000;HRun=10;HaplotypeScore=72.5403;InbreedingCoeff=0.4687;MQ=71.28;MQ0=11;MQRankSum=0.289;QD=6.01;ReadPosRankSum=0.493;VQSLOD=1.1740;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,24:27:54.14:576,54,0	0/0:13,0:13:31.95:0,32,245	0/1:45,1:26:26.85:27,0,132	0/0:42,0:19:12.42:0,12,89	0/0:38,1:40:71.93:0,72,787	0/0:22,0:22:59.93:0,60,493	0/0:15,0:15:39.82:0,40,319	0/0:31,0:30:45.18:0,45,565	0/0:20,0:20:56.92:0,57,467	0/0:40,0:40:73.10:0,73,768	0/0:22,0:21:45.03:0,45,429	0/0:22,0:22:56.91:0,57,465	0/0:19,0:19:41.92:0,42,344	0/0:30,0:30:70.15:0,70,557	0/0:32,0:32:85.94:0,86,695	0/0:22,0:22:56.92:0,57,467	0/0:30,4:34:25.76:0,26,612	0/0:17,0:17:47.93:0,48,393	0/0:18,0:18:53.28:0,53,420	0/0:25,0:25:43.90:0,44,534	0/1:9,0:9:7.68:8,0,148	0/0:18,0:18:50.94:0,51,419	0/0:26,0:26:56.91:0,57,468	0/0:16,0:16:47.93:0,48,392	0/0:21,1:21:24.88:0,25,403	0/0:32,0:32:83.84:0,84,687	0/0:31,1:31:53.38:0,53,633	0/0:6,0:6:14.02:0,14,105
chr10	47718869	.	C	CCCAT	11762.66	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-12.843;DP=687;FS=1.090;HRun=0;HaplotypeScore=107.0134;InbreedingCoeff=0.9980;MQ=76.60;MQ0=0;MQRankSum=-5.044;QD=68.79;ReadPosRankSum=-0.254;VQSLOD=6.8661;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,108,2041	0/0:8,0:8:24.07:0,24,422	0/0:21,0:21:57.19:0,57,1029	0/0:23,0:23:57.16:0,57,963	0/0:25,0:25:66.22:0,66,1242	0/0:23,0:23:60.19:0,60,1100	0/0:26,0:26:69.23:0,69,1252	1/1:16,17:34:87.26:2156,87,0	1/1:2,22:24:63.22:1699,63,0	0/0:34,0:34:99:0,99,1880	0/0:20,0:20:57.18:0,57,1050	1/1:2,25:28:75.26:1965,75,0	1/1:2,33:35:99:2747,102,0	0/0:40,0:40:99:0,114,2114	0/0:26,0:26:75.23:0,75,1345	0/0:31,0:31:90.29:0,90,1672	0/0:22,0:22:66.20:0,66,1210	0/0:25,0:25:75.26:0,75,1421	0/0:9,0:9:27.09:0,27,513	0/0:20,0:20:51.16:0,51,934	0/0:49,0:49:99:0,132,2494	1/1:0,8:8:21.07:565,21,0	1/1:3,8:12:24.08:647,24,0	1/1:1,27:29:74.85:1982,75,0	0/0:21,0:21:54.17:0,54,982	0/0:28,0:28:81.22:0,81,1437	0/0:17,0:17:42.14:0,42,796	0/0:9,0:9:24.08:0,24,454
chr10	47719092	.	GA	G	1987.74	PASS	AB=0.764;AC=34;AF=0.654;AN=52;BaseQRankSum=-2.741;DP=386;FS=14.930;HRun=12;HaplotypeScore=93.8011;InbreedingCoeff=0.4071;MQ=36.75;MQ0=13;MQRankSum=-1.735;QD=7.25;ReadPosRankSum=2.282;VQSLOD=0.8944;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:19:37.24:0,37,200	1/1:4,0:4:1.44:8,1,0	./.	./.	1/1:11,5:18:1.30:41,1,0	1/1:10,5:15:5.90:87,6,0	0/1:12,0:11:0.02:0,0,0	1/1:8,5:13:14.31:112,14,0	1/1:8,4:12:23.32:177,23,0	1/1:10,10:20:31.51:234,32,0	1/1:3,7:12:22.36:152,22,0	1/1:5,15:20:34.84:254,35,0	1/1:11,11:21:33.64:247,34,0	0/0:21,0:21:26.80:0,27,238	1/1:5,5:11:19.75:140,20,0	0/1:7,7:14:32.78:95,0,33	1/1:12,3:16:11.82:82,12,0	0/1:9,2:8:25.12:32,0,25	0/0:10,0:9:17.88:0,18,159	0/0:24,1:22:7.14:0,7,224	0/0:15,0:15:11.86:0,12,122	0/1:4,6:10:15.42:76,0,15	1/1:8,2:11:4.98:29,5,0	1/1:2,6:7:14.89:113,15,0	0/1:8,4:13:11.03:54,0,11	0/1:8,5:13:9.52:116,0,10	0/0:15,1:16:3.34:0,3,153	1/1:13,4:15:14.69:110,15,0
chr10	47719108	.	CCAAAA	C	1481.69	PASS	AB=0.939;AC=23;AF=0.426;AN=54;BaseQRankSum=8.307;DP=405;FS=52.101;HRun=0;HaplotypeScore=115.6315;InbreedingCoeff=-0.2536;MQ=31.44;MQ0=7;MQRankSum=-1.109;QD=4.83;ReadPosRankSum=2.361;VQSLOD=-0.3399;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:21,1:20:8.12:8,0,168	0/1:2,1:4:1.87:96,0,2	./.	0/0:3,0:1:0.89:0,1,2	0/1:20,2:24:37.24:125,0,37	0/1:16,0:17:55.08:55,0,87	0/1:6,0:6:8.43:8,0,31	0/1:17,0:17:47.76:48,0,207	0/1:11,0:11:1.18:119,0,1	0/1:18,2:19:52.62:111,0,53	0/1:19,0:19:34.89:35,0,65	1/1:18,0:18:9.20:87,9,0	1/1:23,0:23:10.96:254,11,0	0/0:19,0:18:46:0,46,504	0/1:18,0:18:14.68:15,0,206	0/1:14,0:14:9.62:59,0,10	0/1:14,1:16:21.81:172,0,22	0/1:14,0:12:47.68:48,0,70	0/0:14,0:14:35.76:0,36,332	0/0:20,0:19:15.97:0,16,477	0/0:14,0:14:20.97:0,21,328	0/1:10,0:10:19.13:29,0,19	0/0:6,0:6:8.96:0,9,50	1/1:12,0:11:3.39:62,3,0	0/1:11,0:11:43.13:61,0,43	0/1:12,0:14:29.14:132,0,29	0/0:18,0:18:49.73:0,50,536	0/1:14,0:14:39.36:118,0,39
chr10	47720002	.	AAAACAAACAAACAAAC	A	13212.20	PASS	AB=0.639;AC=25;AF=0.446;AN=56;BaseQRankSum=-4.111;DP=669;FS=1.353;HRun=0;HaplotypeScore=303.7346;InbreedingCoeff=0.8814;MQ=62.69;MQ0=3;MQRankSum=-3.891;QD=42.90;ReadPosRankSum=2.513;VQSLOD=3.3576;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:27:33.11:0,33,606	1/1:4,9:13:8.50:355,9,0	0/0:23,0:20:12.04:0,12,412	0/0:21,0:15:11.96:0,12,266	1/1:7,24:31:56.70:1087,57,0	1/1:7,18:25:18.06:678,18,0	0/1:10,13:23:33.40:512,0,33	0/0:21,0:37:46.92:0,47,602	0/0:12,0:25:30.53:0,31,408	1/1:7,20:27:56.78:1385,57,0	1/1:7,17:24:39.05:1490,39,0	0/0:11,0:25:45.10:0,45,677	0/0:7,0:26:42.13:0,42,665	0/0:6,0:20:39.12:0,39,599	1/1:14,24:38:45.15:1938,45,0	1/1:35,0:35:44.48:1776,44,0	1/1:8,13:21:12.04:431,12,0	1/1:18,2:19:23.82:394,24,0	0/0:13,0:21:30.09:0,30,617	0/0:6,0:22:42.14:0,42,815	0/0:15,0:19:8.98:0,9,110	0/0:7,0:17:33.03:0,33,778	0/0:9,0:28:61.07:0,61,1031	0/0:14,0:23:25.17:0,25,369	1/1:6,19:25:45.11:1865,45,0	1/1:7,17:24:41.97:1038,42,0	0/0:10,0:26:54.64:0,55,921	1/1:0,2:2:6.02:264,6,0
chr10	47720026	.	CAAACAAACAAACAAACA	C	9871.71	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=4.427;DP=623;FS=1.242;HRun=0;HaplotypeScore=297.0451;InbreedingCoeff=-0.0017;MQ=48.84;MQ0=8;MQRankSum=-7.819;QD=35.51;ReadPosRankSum=8.940;VQSLOD=2.6658;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:42.14:0,42,983	0/1:9,0:9:57.89:232,0,58	0/0:21,0:14:33.10:0,33,717	0/0:23,0:12:30.02:0,30,678	0/1:28,0:28:99:684,0,107	0/1:24,0:24:99:424,0,181	0/1:17,0:17:76.21:361,0,76	0/0:34,0:32:93.08:0,93,1479	0/0:24,0:24:45.58:0,46,901	0/1:24,0:24:99:807,0,168	0/1:21,0:21:93.45:1042,0,93	0/0:22,0:22:51.11:0,51,979	0/0:26,0:26:57.18:0,57,1086	0/0:25,0:25:63.18:0,63,1286	1/1:26,0:26:45.15:1396,45,0	1/1:1,37:38:44.12:2210,44,0	0/1:18,0:19:99:259,0,153	0/1:18,0:17:66.54:286,0,67	0/0:17,0:17:45.07:0,45,954	0/0:21,0:21:54.18:0,54,1246	0/0:16,0:16:33.06:0,33,503	0/0:14,0:14:42.06:0,42,1105	0/0:31,0:31:79.46:0,79,1496	0/0:23,0:23:46.35:0,46,877	0/1:25,0:25:51.36:1357,0,51	0/1:21,0:21:99:645,0,113	0/0:25,0:25:66.67:0,67,1301	0/1:8,0:7:99:170,0,159
chr10	47720747	.	G	GA	1526.77	PASS	AB=0.928;AC=29;AF=0.518;AN=56;BaseQRankSum=2.060;DP=634;FS=9.399;HRun=17;HaplotypeScore=76.3913;InbreedingCoeff=0.2741;MQ=58.66;MQ0=21;MQRankSum=-1.385;QD=3.86;ReadPosRankSum=-1.898;VQSLOD=-0.3119;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:38:24.31:0,24,184	0/0:6,0:6:2.72:0,3,14	0/0:43,0:9:8.75:0,9,78	0/0:36,0:8:0.96:0,1,19	1/1:25,0:30:23.31:168,23,0	0/1:22,2:25:7.66:141,0,8	1/1:18,1:17:9.72:110,10,0	1/1:22,0:23:19.32:113,19,0	0/1:11,2:15:17.36:17,0,54	1/1:14,10:25:9.77:189,10,0	1/1:6,10:16:17.70:113,18,0	0/0:12,0:18:17.66:0,18,70	0/0:22,0:23:22.53:0,23,176	0/0:9,0:11:11.90:0,12,42	0/1:28,5:33:5.96:183,0,6	0/1:17,2:21:44.60:86,0,45	1/1:29,2:31:34.78:229,35,0	1/1:12,1:13:3.96:83,4,0	0/1:20,0:17:15.95:16,0,43	0/1:22,1:21:30.45:56,0,30	0/1:10,0:10:8.78:16,0,9	0/1:13,0:15:0.63:1,0,83	0/1:17,1:21:6.48:6,0,98	0/0:21,0:30:18.70:0,19,131	1/1:13,1:16:8.77:92,9,0	1/1:11,9:21:2.27:65,2,0	0/0:23,0:24:38.53:0,39,166	1/1:5,2:6:2.99:23,3,0
chr10	47720761	.	A	AG	685.33	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-6.159;DP=651;FS=4.400;HRun=0;HaplotypeScore=78.9854;InbreedingCoeff=0.8037;MQ=62.58;MQ0=10;MQRankSum=2.902;QD=18.04;ReadPosRankSum=-1.119;VQSLOD=5.4943;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:40:95.55:0,96,935	0/0:7,0:6:12:0,12,117	0/0:44,0:14:35.51:0,36,307	0/0:34,0:11:5.30:0,5,92	0/0:29,0:28:66.25:0,66,459	0/0:24,0:24:53.20:0,53,411	0/0:17,0:16:39.34:0,39,284	1/1:8,29:38:85.18:780,85,0	0/0:18,0:18:43.84:0,44,409	0/0:30,0:30:70.62:0,71,517	0/0:21,0:20:16.90:0,17,111	0/0:15,0:15:32.92:0,33,307	0/0:23,0:23:51.97:0,52,625	0/0:13,0:13:29.86:0,30,261	0/0:32,0:31:64.38:0,64,443	0/0:20,0:20:47.54:0,48,417	0/0:36,0:32:70.16:0,70,445	0/0:15,0:13:27.58:0,28,192	0/0:28,0:26:70.28:0,70,641	0/0:19,0:18:47.45:0,47,384	0/0:11,0:11:31.91:0,32,249	0/0:13,0:13:37.27:0,37,393	0/0:22,0:22:56.96:0,57,584	0/0:28,0:27:56.21:0,56,561	0/0:18,0:18:42.66:0,43,310	0/0:20,0:20:47.33:0,47,338	0/0:28,0:27:74.67:0,75,732	0/0:4,0:4:7.53:0,8,51
chr10	47720874	.	CATTGG	C	1459.86	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=7.593;DP=576;FS=0.000;HRun=0;HaplotypeScore=110.4194;InbreedingCoeff=0.6415;MQ=73.76;MQ0=3;MQRankSum=-3.271;QD=21.16;ReadPosRankSum=0.883;VQSLOD=2.8042;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,32:33:69.24:1536,69,0	0/0:9,0:9:27.09:0,27,824	0/1:33,0:27:29.49:29,0,1600	0/0:30,0:22:16.72:0,17,974	0/0:15,0:15:42.14:0,42,1286	0/0:21,0:21:63.22:0,63,2011	0/0:17,0:17:51.18:0,51,1576	0/0:37,0:37:99:0,108,3419	0/0:13,0:13:33.11:0,33,1002	0/0:26,0:26:78.26:0,78,2425	0/0:11,0:11:27.09:0,27,815	0/0:18,0:18:51.18:0,51,1597	0/0:20,0:20:51.18:0,51,1640	0/0:17,0:17:42.14:0,42,1353	0/0:17,0:17:51.18:0,51,1624	0/0:15,0:15:45.15:0,45,1346	0/0:28,0:28:81.26:0,81,2436	0/0:20,0:20:60.21:0,60,1911	0/0:26,0:26:69.24:0,69,2198	0/0:17,0:17:51.18:0,51,1648	0/0:19,0:19:54.12:0,54,1568	0/0:9,0:9:27.09:0,27,870	0/0:14,0:14:42.13:0,42,1214	0/0:19,0:18:51.15:0,51,1556	0/0:22,0:22:57.20:0,57,1842	0/0:28,0:28:78.27:0,78,2518	0/0:23,0:23:66.23:0,66,2105	0/0:14,0:14:42.14:0,42,1340
chr10	47721148	.	AC	A	1228.63	PASS	AB=0.962;AC=13;AF=0.232;AN=56;BaseQRankSum=-1.345;DP=556;FS=0.502;HRun=5;HaplotypeScore=68.3797;InbreedingCoeff=0.0811;MQ=51.01;MQ0=37;MQRankSum=0.155;QD=5.37;ReadPosRankSum=-0.398;VQSLOD=-0.6560;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,23:27:47.86:629,48,0	0/0:12,0:11:28.24:0,28,305	0/0:54,0:4:4.87:0,5,79	0/0:53,0:9:0.13:0,0,50	0/1:24,0:22:13.04:78,0,13	0/0:16,0:15:38.88:0,39,449	0/0:14,0:11:23.45:0,23,303	0/0:9,0:17:38.43:0,38,280	0/0:19,0:17:27.12:0,27,334	1/1:8,2:10:2.76:63,3,0	0/1:18,0:16:10.50:41,0,11	0/1:10,0:10:3.49:3,0,177	0/0:10,0:9:20.90:0,21,204	0/0:10,0:10:24.05:0,24,290	0/0:18,0:17:48.13:0,48,601	0/1:11,1:11:9.55:45,0,10	0/1:47,3:50:63.39:243,0,63	0/1:25,1:23:25.26:83,0,25	0/0:19,0:19:45.01:0,45,512	0/0:19,0:17:48.02:0,48,585	0/0:6,0:6:5.61:0,6,100	0/0:13,0:13:30.37:0,30,361	0/0:17,0:16:38.77:0,39,451	0/0:6,0:6:12.02:0,12,132	0/1:19,3:22:19.86:120,0,20	0/1:16,1:17:19.80:55,0,20	0/0:22,0:21:31.50:0,31,483	0/1:10,0:5:5.18:22,0,5
chr10	47721175	.	A	AAAAAAC	2142.68	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-5.572;DP=581;FS=0.000;HRun=0;HaplotypeScore=128.6382;InbreedingCoeff=0.9043;MQ=56.03;MQ0=25;MQRankSum=-5.327;QD=25.82;ReadPosRankSum=1.090;VQSLOD=3.3386;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:57.12:0,57,1024	0/0:12,0:12:27.08:0,27,502	0/0:39,0:9:17.38:0,17,220	0/0:46,0:11:14.84:0,15,126	0/0:24,0:23:48.11:0,48,838	0/0:14,0:14:27.09:0,27,548	0/0:14,0:13:24.06:0,24,428	0/0:25,0:25:54.17:0,54,917	1/1:7,7:14:15.05:484,15,0	0/0:23,0:23:51.18:0,51,1036	0/0:18,0:18:22.78:0,23,446	1/1:8,4:12:3.01:96,3,0	1/1:4,10:14:15.05:484,15,0	0/0:13,0:13:24.07:0,24,438	0/0:24,0:24:51.17:0,51,967	0/0:18,0:18:24.08:0,24,454	0/0:49,0:48:88.11:0,88,1614	0/0:23,0:20:48.12:0,48,847	0/0:24,0:20:36.06:0,36,692	0/0:17,0:16:30.06:0,30,555	0/0:9,0:8:15.05:0,15,296	1/1:6,12:17:27.09:729,27,0	1/1:7,9:15:15.52:422,16,0	1/1:2,2:6:3.01:97,3,0	0/0:28,0:28:57.18:0,57,1084	0/0:24,0:23:48.16:0,48,920	0/0:16,0:16:24.08:0,24,479	0/0:10,0:9:24.06:0,24,431
chr10	47721207	.	TC	T	1566.71	PASS	AB=0.955;AC=3;AF=0.054;AN=56;BaseQRankSum=1.891;DP=532;FS=1.972;HRun=3;HaplotypeScore=73.4154;InbreedingCoeff=0.7158;MQ=66.03;MQ0=2;MQRankSum=-0.597;QD=25.27;ReadPosRankSum=-4.756;VQSLOD=1.8055;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:84.22:0,84,1242	0/0:11,0:11:33.11:0,33,527	0/0:24,0:21:63.14:0,63,925	0/1:20,0:16:2.81:3,0,522	0/0:24,0:24:72.22:0,72,1108	0/0:14,0:14:42.10:0,42,616	0/0:14,0:14:42.14:0,42,671	1/1:0,41:41:99:1661,123,0	0/0:13,0:13:27.98:0,28,432	0/0:23,0:23:69.24:0,69,1103	0/0:11,0:11:30.10:0,30,479	0/0:13,0:13:25.90:0,26,386	0/0:17,0:17:35.63:0,36,573	0/0:14,0:14:42.10:0,42,643	0/0:22,0:22:66.20:0,66,1006	0/0:14,0:14:39.13:0,39,621	0/0:41,0:41:99:0,120,1904	0/0:23,0:23:69.19:0,69,1072	0/0:26,0:26:75.23:0,75,1167	0/0:18,0:18:54.18:0,54,862	0/0:14,0:13:39.08:0,39,549	0/0:14,0:13:36.12:0,36,572	0/0:11,0:11:13.15:0,13,233	0/0:8,0:8:15.05:0,15,226	0/0:24,0:24:72.21:0,72,1090	0/0:25,0:25:72.19:0,72,1099	0/0:11,0:11:33.11:0,33,523	0/0:11,0:11:33.11:0,33,521
chr10	47721272	.	A	AGG	363.86	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=-4.329;DP=477;FS=4.735;HRun=6;HaplotypeScore=57.0137;InbreedingCoeff=0.6804;MQ=73.97;MQ0=0;MQRankSum=0.890;QD=18.19;ReadPosRankSum=0.776;VQSLOD=0.3694;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:84.23:0,84,1001	0/0:9,0:9:24.05:0,24,278	0/0:12,0:11:19.12:0,19,202	0/1:8,0:9:6.82:7,0,189	0/0:24,0:24:63.14:0,63,748	0/0:21,0:21:63.19:0,63,757	0/0:19,0:19:54.11:0,54,619	0/0:24,0:24:66.20:0,66,796	0/0:9,0:9:18.05:0,18,219	0/0:13,0:13:36.11:0,36,436	0/0:11,0:11:27.08:0,27,329	0/0:17,0:17:45.10:0,45,532	0/0:20,0:20:57.18:0,57,695	0/0:14,0:14:33.10:0,33,402	0/0:19,0:19:54.17:0,54,659	1/1:0,11:11:27.09:457,27,0	0/0:34,0:34:90.27:0,90,1096	0/0:25,0:25:69.17:0,69,825	0/0:14,0:14:39.08:0,39,447	0/0:14,0:14:36.10:0,36,425	0/0:30,0:30:87.26:0,87,1046	0/0:9,0:9:27.08:0,27,328	0/0:11,0:11:30.06:0,30,350	0/0:14,0:14:30.09:0,30,366	0/0:14,0:14:39.12:0,39,475	0/0:20,0:20:57.16:0,57,677	0/0:17,0:17:48.15:0,48,584	0/0:11,0:11:33.10:0,33,402
chr10	47721878	.	G	GGATGGATGGATA	4832.14	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=5.284;DP=680;FS=3.852;HRun=0;HaplotypeScore=236.5071;InbreedingCoeff=-0.1197;MQ=60.80;MQ0=2;MQRankSum=-8.525;QD=18.80;ReadPosRankSum=-2.519;VQSLOD=3.2900;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:9,23:37:7.54:1209,8,0	0/0:6,0:6:6.86:0,7,34	0/0:24,0:16:38.23:0,38,489	0/0:34,0:22:54.09:0,54,695	0/1:12,0:12:80.92:171,0,81	0/0:25,0:25:44.33:0,44,304	0/0:33,0:33:57.90:0,58,431	0/1:33,0:31:99:447,0,419	0/1:18,0:17:79:79,0,119	0/1:16,0:16:99:386,0,106	0/1:17,0:17:84.85:358,0,85	0/1:25,0:24:0.31:0,0,249	0/0:36,0:35:70.30:0,70,484	0/0:26,0:26:78.17:0,78,2156	0/0:25,0:25:42.54:0,43,309	0/0:32,0:31:51.39:0,51,462	0/1:27,0:27:99:490,0,209	0/1:19,0:19:99:238,0,208	0/0:19,0:18:42.41:0,42,787	0/0:24,0:24:63.12:0,63,1602	0/0:41,0:41:99:0,114,2370	0/0:24,0:24:6.46:0,6,230	0/0:20,0:20:36.96:0,37,271	0/0:30,0:29:69.15:0,69,460	0/1:19,0:19:99:472,0,119	0/1:27,0:27:99:742,0,168	0/0:24,0:24:68.19:0,68,1677	0/1:7,0:7:20.94:239,0,21
chr10	47722010	.	T	TAC	1306.99	PASS	AB=1.000;AC=37;AF=0.712;AN=52;BaseQRankSum=-1.826;DP=680;FS=19.930;HRun=0;HaplotypeScore=118.9385;InbreedingCoeff=0.4362;MQ=55.88;MQ0=24;MQRankSum=1.080;QD=2.73;ReadPosRankSum=-0.962;VQSLOD=1.0813;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:46,0:44:28.91:138,0,29	0/0:5,0:5:0.89:0,1,2	./.	./.	1/1:27,0:26:6:55,6,0	1/1:34,0:34:11.29:86,11,0	1/1:34,0:33:6.30:51,6,0	1/1:26,0:24:12.95:49,13,0	1/1:17,0:17:6:51,6,0	1/1:14,4:16:15.35:123,15,0	0/0:9,0:9:0.47:0,0,1	1/1:25,0:23:4.88:48,5,0	1/1:33,0:32:16.71:152,17,0	0/0:30,0:31:8.44:0,8,40	1/1:21,0:20:3.90:39,4,0	1/1:24,6:33:6.01:70,6,0	1/1:32,0:30:12.48:125,12,0	1/1:22,1:22:14.52:87,15,0	0/0:9,0:10:2.69:0,3,14	0/0:18,0:17:0.42:0,0,1	0/0:28,0:28:2.80:0,3,13	1/1:11,0:11:8.80:75,9,0	1/1:18,0:17:6.09:56,6,0	1/1:16,0:27:3:25,3,0	1/1:17,0:17:5.92:48,6,0	1/1:26,0:25:16.01:137,16,0	0/0:15,0:16:6.58:0,7,29	1/1:3,0:10:3:26,3,0
chr10	47722058	.	C	CACAC	2362.38	PASS	AB=1.000;AC=43;AF=0.768;AN=56;BaseQRankSum=-2.317;DP=623;FS=18.205;HRun=0;HaplotypeScore=123.5552;InbreedingCoeff=0.2749;MQ=59.48;MQ0=24;MQRankSum=1.670;QD=4.61;ReadPosRankSum=-1.969;VQSLOD=1.1115;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:35,0:33:45.54:130,0,46	0/0:4,0:4:0.83:0,1,2	0/1:31,0:11:0:0,0,0	0/0:46,0:28:2.74:0,3,24	1/1:19,5:25:9.01:138,9,0	1/1:28,0:28:14.53:145,15,0	1/1:30,0:30:8.87:112,9,0	1/1:28,0:26:20.77:80,21,0	1/1:10,0:10:6.01:95,6,0	1/1:19,0:18:11.25:159,11,0	0/1:6,0:6:0:1,0,0	1/1:15,0:12:4.12:110,4,0	1/1:31,0:27:19.32:255,19,0	0/0:21,0:21:9:0,9,80	1/1:25,0:24:3.48:61,3,0	1/1:27,0:27:10.56:111,11,0	1/1:35,0:33:12.97:215,13,0	1/1:19,0:19:13.71:166,14,0	0/1:22,0:22:21.85:22,0,22	1/1:9,0:8:2.89:25,3,0	0/0:39,0:39:2.64:0,3,25	1/1:16,0:15:6.36:86,6,0	1/1:11,0:10:6.41:82,6,0	1/1:23,0:23:3.01:68,3,0	1/1:12,0:12:5.50:97,6,0	1/1:30,0:29:20.35:275,20,0	0/1:12,0:12:14.27:14,0,46	1/1:13,0:12:3.01:52,3,0
chr10	47722352	.	G	GGA	481.10	PASS	AB=0.990;AC=6;AF=0.107;AN=56;BaseQRankSum=-0.610;DP=462;FS=9.070;HRun=0;HaplotypeScore=79.6589;InbreedingCoeff=0.2538;MQ=61.95;MQ0=21;MQRankSum=4.342;QD=4.15;ReadPosRankSum=-4.488;VQSLOD=-0.5025;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:23:51.12:0,51,431	0/0:6,0:6:17.98:0,18,157	0/1:51,0:14:4.71:5,0,119	0/0:50,0:15:5.10:0,5,93	0/0:16,0:18:18.86:0,19,280	0/1:23,0:24:5.87:6,0,313	0/0:8,1:14:20.27:0,20,178	1/1:8,16:30:60.20:570,60,0	0/0:17,0:17:5.21:0,5,182	0/0:9,0:12:28.58:0,29,261	0/0:7,0:8:24:0,24,213	0/0:15,0:15:29.19:0,29,285	0/0:17,0:17:42.12:0,42,355	0/0:5,0:5:5.66:0,6,52	0/0:6,0:6:17.28:0,17,126	0/0:7,0:10:16.57:0,17,167	0/0:7,0:10:23.91:0,24,203	0/0:16,0:17:39.78:0,40,389	0/0:18,0:19:18.68:0,19,361	0/0:13,0:13:30.94:0,31,248	0/0:13,0:12:13.60:0,14,140	0/1:4,0:4:3.31:3,0,19	0/1:5,0:5:9.82:10,0,48	0/0:20,0:19:37.50:0,37,298	0/0:13,0:17:24.19:0,24,237	0/0:13,0:12:29.46:0,29,246	0/0:13,0:14:31.84:0,32,268	0/0:7,0:5:11.93:0,12,89
chr10	47722503	.	C	CTATT	1249.06	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-6.360;DP=442;FS=3.280;HRun=0;HaplotypeScore=68.1762;InbreedingCoeff=0.9299;MQ=68.95;MQ0=0;MQRankSum=-2.210;QD=44.61;ReadPosRankSum=2.879;VQSLOD=4.1354;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,20:28:54.19:1344,54,0	0/0:9,0:9:18.06:0,18,304	0/0:8,0:8:24.08:0,24,392	0/0:8,0:8:12.02:0,12,176	0/0:19,0:19:51.13:0,51,801	0/0:22,0:22:51.16:0,51,830	0/0:15,0:15:45.15:0,45,759	0/0:30,0:30:54.16:0,54,861	0/0:18,0:18:45.14:0,45,733	0/0:10,0:10:24.08:0,24,405	0/0:15,0:15:36.11:0,36,580	0/0:15,0:15:33.11:0,33,542	0/0:11,0:11:30.10:0,30,503	0/0:11,0:11:18.03:0,18,250	0/0:11,0:11:21.07:0,21,349	0/0:9,0:9:24.07:0,24,372	0/0:25,0:25:66.21:0,66,1081	0/0:15,0:15:39.11:0,39,631	0/0:19,0:19:33.10:0,33,533	0/0:14,0:14:30.10:0,30,503	0/0:21,0:21:51.15:0,51,828	0/0:6,0:6:15.05:0,15,253	0/0:17,0:17:42.14:0,42,709	0/0:22,0:22:51.17:0,51,856	0/0:15,0:15:36.12:0,36,608	0/0:13,0:13:36.12:0,36,605	0/0:24,0:24:57.18:0,57,921	0/0:12,0:12:30.10:0,30,506
chr10	47729110	.	TA	T	1890.08	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.985;DP=819;FS=1.128;HRun=2;HaplotypeScore=116.3065;InbreedingCoeff=0.9959;MQ=85.51;MQ0=0;MQRankSum=-4.059;QD=35.00;ReadPosRankSum=0.668;VQSLOD=3.3452;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,54:54:99:1985,153,0	0/0:16,0:16:48.16:0,48,719	0/0:30,0:30:84.24:0,84,1140	0/0:23,0:23:60.08:0,60,720	0/0:32,0:32:96.30:0,96,1400	0/0:19,0:19:57.18:0,57,818	0/0:26,0:26:78.23:0,78,1092	0/0:35,0:35:99:0,102,1461	0/0:34,0:34:99:0,102,1529	0/0:21,0:21:63.19:0,63,877	0/0:27,0:27:81.25:0,81,1170	0/0:34,0:34:99:0,102,1471	0/0:31,0:31:93.29:0,93,1348	0/0:23,0:23:66.22:0,66,989	0/0:37,0:37:99:0,111,1663	0/0:31,0:31:93.31:0,93,1366	0/0:33,0:33:99:0,99,1445	0/0:28,0:28:77.98:0,78,1071	0/0:12,0:12:36.11:0,36,521	0/0:22,0:22:66.20:0,66,952	0/0:49,0:49:99:0,147,2154	0/0:43,0:43:99:0,123,1818	0/0:29,0:29:87.28:0,87,1278	0/0:34,0:34:99:0,102,1479	0/0:23,0:23:69.21:0,69,995	0/0:35,0:35:99:0,105,1556	0/0:31,0:31:93.29:0,93,1353	0/0:7,0:7:21.07:0,21,315
chr10	47731448	.	A	AT	1871.54	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=-7.054;DP=516;FS=3.523;HRun=12;HaplotypeScore=58.8580;InbreedingCoeff=0.8817;MQ=79.47;MQ0=2;MQRankSum=1.246;QD=15.34;ReadPosRankSum=-1.544;VQSLOD=4.0751;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:62.62:0,63,460	0/0:6,0:7:16.94:0,17,115	0/0:18,0:13:10.15:0,10,59	0/1:19,0:15:19.81:20,0,29	0/0:16,0:16:35.76:0,36,263	0/0:26,0:28:72.65:0,73,512	0/0:17,0:19:45.79:0,46,314	0/0:27,0:29:67.53:0,68,479	1/1:7,17:24:32.13:465,32,0	0/0:24,1:25:27.47:0,27,363	0/0:12,0:13:31.86:0,32,225	1/1:1,12:13:30.04:287,30,0	1/1:6,12:18:29.88:290,30,0	0/0:15,0:15:29.79:0,30,219	0/0:17,0:17:44.71:0,45,326	0/0:18,0:18:47.69:0,48,348	0/0:25,0:25:53.59:0,54,391	0/0:17,0:18:40.78:0,41,288	0/0:16,0:16:12.24:0,12,216	0/0:20,0:23:52.72:0,53,378	0/0:8,0:8:17.88:0,18,129	1/1:2,13:15:33.05:321,33,0	1/1:2,13:15:33.05:321,33,0	1/1:3,15:18:20.16:358,20,0	0/0:13,0:13:29.82:0,30,219	0/0:20,0:22:36.78:0,37,249	0/0:23,0:23:50.24:0,50,358	0/0:14,0:15:23.70:0,24,161
chr10	47733328	.	TTCTCTCTC	T	175.77	PASS	AB=0.989;AC=9;AF=0.161;AN=56;BaseQRankSum=2.209;DP=629;FS=1.598;HRun=0;HaplotypeScore=163.4638;InbreedingCoeff=0.2807;MQ=65.89;MQ0=22;MQRankSum=2.429;QD=1.38;ReadPosRankSum=0.852;VQSLOD=2.9154;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:37:39.13:0,39,1155	0/0:10,0:10:7.84:0,8,209	0/0:34,0:24:0:0,0,0	0/0:43,0:25:0.94:0,1,2	0/0:20,0:20:12.04:0,12,307	0/0:12,0:11:14.93:0,15,398	1/1:15,0:15:1.68:62,2,0	0/0:29,0:29:6.64:0,7,49	0/0:18,0:17:4.81:0,5,30	0/0:16,0:14:24.05:0,24,489	0/0:18,0:18:6.28:0,6,122	0/1:28,1:27:64.35:92,0,64	0/1:15,0:14:0.67:1,0,57	0/0:22,0:21:22.78:0,23,561	0/0:20,0:20:18.02:0,18,362	0/0:20,0:19:17.29:0,17,407	0/0:28,0:28:1.64:0,2,622	0/0:20,0:19:16.96:0,17,247	0/0:23,0:22:15.05:0,15,453	0/0:20,0:20:0.89:0,1,2	0/0:29,0:26:18.06:0,18,462	1/1:16,5:20:0.88:2,1,0	1/1:8,0:12:0.85:1,1,0	0/1:34,0:33:99:119,0,136	0/0:24,0:24:21.07:0,21,565	0/0:23,0:22:25.90:0,26,679	0/0:22,0:22:33.58:0,34,971	0/0:12,0:10:6.02:0,6,161
chr10	47733373	.	TCACA	T	2782.80	PASS	AB=0.952;AC=33;AF=0.660;AN=50;BaseQRankSum=-2.989;DP=595;FS=4.190;HRun=0;HaplotypeScore=146.4437;InbreedingCoeff=0.4864;MQ=46.68;MQ0=33;MQRankSum=1.157;QD=6.27;ReadPosRankSum=1.027;VQSLOD=2.5412;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:32,0:32:12.51:377,13,0	0/0:9,0:9:11.33:0,11,203	./.	./.	./.	0/0:20,0:19:26.95:0,27,448	0/0:20,0:18:21.07:0,21,333	0/0:29,0:26:10.75:0,11,130	1/1:25,0:24:8.86:95,9,0	1/1:17,3:17:5.88:80,6,0	0/1:17,8:23:0.09:0,0,0	0/0:31,0:28:1.57:0,2,19	0/1:18,0:17:33.83:96,0,34	1/1:21,0:20:27.07:394,27,0	0/0:30,0:30:35.79:0,36,587	0/1:33,0:31:2.45:2,0,609	1/1:25,0:35:2.08:35,2,0	1/1:20,0:18:21.50:270,21,0	0/1:18,0:17:2.21:139,0,2	1/1:6,7:12:3.48:39,3,0	1/1:32,0:27:24.07:340,24,0	1/1:15,0:13:5.05:74,5,0	1/1:14,0:13:5.47:42,5,0	0/1:35,0:33:31.86:55,0,32	1/1:29,0:29:30.10:437,30,0	1/1:19,6:24:17.93:218,18,0	1/1:21,0:22:9.03:131,9,0	1/1:8,0:6:8.96:125,9,0
chr10	47734799	.	CT	C	5094.88	PASS	AB=1.000;AC=39;AF=0.696;AN=56;BaseQRankSum=10.697;DP=630;FS=1.127;HRun=11;HaplotypeScore=98.2712;InbreedingCoeff=0.8462;MQ=71.62;MQ0=0;MQRankSum=-0.809;QD=11.58;ReadPosRankSum=5.237;VQSLOD=4.5363;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:24:51.83:272,52,0	1/1:2,15:17:44.94:369,45,0	0/0:23,0:19:4.10:0,4,191	0/0:15,0:12:14.14:0,14,164	1/1:39,0:39:29.89:371,30,0	1/1:4,17:22:49.96:400,50,0	1/1:4,17:21:47.93:394,48,0	0/0:35,0:35:48.66:0,49,726	1/1:13,0:13:25.15:131,25,0	1/1:20,0:20:42.96:197,43,0	1/1:18,0:18:13.85:175,14,0	1/1:25,0:25:31.48:240,31,0	1/1:21,0:21:40.03:200,40,0	0/0:14,0:15:41.92:0,42,418	1/1:3,20:24:61.95:499,62,0	1/1:28,0:28:74.10:362,74,0	1/1:35,0:35:29.76:297,30,0	1/1:18,0:18:21.86:194,22,0	0/0:22,2:28:19.38:0,19,569	0/0:22,1:23:38.48:0,38,590	0/0:17,0:17:44.48:0,44,455	1/1:18,0:18:11.51:137,12,0	1/1:25,0:25:4.66:209,5,0	1/1:20,0:20:8.47:156,8,0	1/1:24,0:24:54.09:266,54,0	0/1:19,0:19:42.80:111,0,43	0/0:32,0:32:84.68:0,85,897	1/1:9,0:9:23.03:118,23,0
chr10	47734809	.	TTC	T	4039.60	PASS	AB=1.000;AC=33;AF=0.589;AN=56;BaseQRankSum=12.173;DP=665;FS=0.000;HRun=0;HaplotypeScore=121.2496;InbreedingCoeff=0.9229;MQ=72.05;MQ0=0;MQRankSum=-0.407;QD=9.62;ReadPosRankSum=2.054;VQSLOD=3.4439;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:25:51.10:218,51,0	0/0:15,0:15:41.19:0,41,221	0/0:22,0:17:21.16:0,21,323	0/0:18,0:15:16.23:0,16,267	1/1:41,1:42:87.95:526,88,0	0/0:21,0:21:43.86:0,44,277	0/0:21,0:21:55.45:0,55,333	0/1:36,0:35:63.93:64,0,271	1/1:15,0:15:40.01:249,40,0	1/1:20,2:22:56.56:346,57,0	1/1:23,0:23:45.22:305,45,0	1/1:27,0:27:50.89:212,51,0	1/1:19,0:19:37.19:154,37,0	0/0:17,0:17:51.13:0,51,748	0/0:25,0:25:65.35:0,65,431	1/1:31,0:31:69.64:290,70,0	1/1:37,1:38:66.61:281,67,0	1/1:21,0:21:37.41:154,37,0	0/0:28,0:28:80.97:0,81,1116	0/0:27,0:27:72.08:0,72,1052	0/0:16,0:16:48.15:0,48,769	1/1:18,0:18:38.24:179,38,0	1/1:25,1:26:27.03:256,27,0	1/1:16,0:16:24:154,24,0	1/1:29,0:29:50.67:211,51,0	1/1:23,1:24:43.79:351,44,0	0/0:35,0:35:99:0,99,1551	1/1:8,0:8:21.43:89,21,0
chr10	47734810	.	TC	T	12584.17	PASS	AB=0.977;AC=38;AF=0.679;AN=56;BaseQRankSum=2.650;DP=655;FS=1.149;HRun=1;HaplotypeScore=78.1043;InbreedingCoeff=0.8391;MQ=71.76;MQ0=0;MQRankSum=0.041;QD=26.95;ReadPosRankSum=2.328;VQSLOD=4.8071;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,25:25:57.15:766,57,0	1/1:15,0:15:12.80:72,13,0	0/1:17,0:15:3.79:4,0,230	0/0:18,0:15:13.11:0,13,204	1/1:12,28:40:99:1453,116,0	0/1:20,1:21:37.95:38,0,50	0/0:21,0:21:10.87:0,11,82	1/1:33,1:34:18.44:295,18,0	1/1:8,8:16:48.04:550,48,0	1/1:2,20:22:66:778,66,0	1/1:10,14:24:68.38:826,68,0	1/1:0,26:26:57.19:791,57,0	1/1:0,19:19:42.14:581,42,0	0/0:17,0:17:51.06:0,51,591	0/0:25,0:25:10.70:0,11,114	1/1:0,31:31:78.26:1082,78,0	1/1:2,35:37:72.15:959,72,0	1/1:0,20:20:42.14:580,42,0	0/0:28,0:28:76.31:0,76,848	0/0:28,0:28:74.92:0,75,867	0/0:16,0:16:48.13:0,48,606	1/1:0,17:17:42.03:519,42,0	1/1:8,18:26:54.62:870,55,0	1/1:4,12:16:40.81:549,41,0	1/1:0,29:29:56.82:790,57,0	1/1:12,12:24:65.46:752,65,0	0/0:35,0:35:80.51:0,81,1226	1/1:0,8:8:24.08:332,24,0
chr10	47735609	.	TG	T	10206.08	PASS	AB=1.000;AC=55;AF=0.982;AN=56;BaseQRankSum=2.610;DP=705;FS=0.000;HRun=6;HaplotypeScore=129.1521;InbreedingCoeff=-0.0251;MQ=69.15;MQ0=3;MQRankSum=-3.011;QD=14.48;ReadPosRankSum=5.645;VQSLOD=3.3515;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:43,0:43:69.12:593,69,0	1/1:8,0:8:23.28:135,23,0	1/1:19,0:19:36.35:162,36,0	0/1:22,0:21:56.96:106,0,57	1/1:27,0:27:61.82:412,62,0	1/1:29,0:29:79.31:442,79,0	1/1:24,0:24:64.19:389,64,0	1/1:37,0:37:99:541,103,0	1/1:29,0:29:81.85:496,82,0	1/1:26,0:26:46.89:365,47,0	1/1:31,0:30:63.23:424,63,0	1/1:27,0:27:73.07:443,73,0	1/1:23,0:23:61.35:368,61,0	1/1:1,20:21:4.56:43,5,0	1/1:26,0:26:69.75:397,70,0	1/1:23,0:23:58.55:358,59,0	1/1:20,0:20:58.41:345,58,0	1/1:10,0:10:23.54:158,24,0	1/1:31,0:31:9.33:368,9,0	1/1:31,0:29:56.27:429,56,0	1/1:39,0:39:99:593,107,0	1/1:26,0:26:62.05:448,62,0	1/1:25,0:25:58.55:375,59,0	1/1:25,0:25:67.30:414,67,0	1/1:16,0:15:41.15:286,41,0	1/1:29,0:29:83.48:454,83,0	1/1:19,0:19:56.24:398,56,0	1/1:16,0:16:38.44:263,38,0
chr10	47735901	.	AC	A	9195.89	PASS	AC=52;AF=1.000;AN=52;DP=396;FS=0.000;HRun=3;HaplotypeScore=129.8283;InbreedingCoeff=-0.0143;MQ=27.28;MQ0=8;QD=23.82;VQSLOD=3.9452;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,17:18:27.04:301,27,0	1/1:1,5:6:9.03:107,9,0	./.	./.	1/1:0,24:23:53.94:580,54,0	1/1:1,16:15:39.12:464,39,0	1/1:2,9:10:24.07:284,24,0	1/1:5,17:21:51.16:623,51,0	1/1:1,16:16:39.12:463,39,0	1/1:0,29:27:81.21:967,81,0	1/1:4,15:18:26.95:281,27,0	1/1:2,13:14:33.10:391,33,0	1/1:1,17:18:48.14:569,48,0	1/1:1,14:14:27.08:319,27,0	1/1:2,13:15:30.09:353,30,0	1/1:1,16:16:27.08:321,27,0	1/1:1,5:4:9.03:108,9,0	1/1:0,3:3:6.02:74,6,0	1/1:2,12:12:29.95:331,30,0	1/1:1,21:20:36.01:393,36,0	1/1:2,5:5:12.02:130,12,0	1/1:1,12:13:32.88:336,33,0	1/1:1,13:14:29.98:315,30,0	1/1:0,4:4:5.98:55,6,0	1/1:0,16:14:33.10:392,33,0	1/1:1,17:16:48.11:561,48,0	1/1:2,15:17:26.44:294,26,0	1/1:0,7:7:15.05:181,15,0
chr10	47735906	.	TC	T	10254.70	PASS	AC=52;AF=1.000;AN=52;DP=377;FS=0.000;HRun=2;HaplotypeScore=126.3561;InbreedingCoeff=-0.0152;MQ=26.63;MQ0=2;QD=27.64;VQSLOD=4.2748;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,18:15:27.08:335,27,0	1/1:0,5:5:9.03:113,9,0	./.	./.	1/1:0,25:24:54.17:672,54,0	1/1:0,16:14:39.12:487,39,0	1/1:0,10:9:24.08:298,24,0	1/1:1,19:19:57.18:732,57,0	1/1:0,16:15:39.12:487,39,0	1/1:0,30:27:81.23:1015,81,0	1/1:0,16:15:27.08:336,27,0	1/1:0,13:12:33.10:411,33,0	1/1:0,17:17:48.15:598,48,0	1/1:0,14:13:27.09:336,27,0	1/1:1,13:14:30.09:371,30,0	1/1:1,17:17:30.10:376,30,0	1/1:0,5:4:9.03:113,9,0	1/1:0,3:3:6.02:77,6,0	1/1:0,14:12:33.08:405,33,0	1/1:0,21:19:36.11:450,36,0	1/1:1,5:4:9.03:111,9,0	1/1:0,13:13:36.11:454,36,0	1/1:0,14:14:30.09:370,30,0	1/1:0,4:4:6.02:76,6,0	1/1:0,16:14:33.10:412,33,0	1/1:0,19:18:54.17:685,54,0	1/1:1,16:17:29.31:347,29,0	1/1:0,7:7:15.05:190,15,0
chr10	47735925	.	GCC	G	10262.43	PASS	AC=52;AF=0.963;AN=54;BaseQRankSum=-1.679;DP=376;FS=0.000;HRun=5;HaplotypeScore=124.7014;InbreedingCoeff=0.3859;MQ=32.06;MQ0=1;MQRankSum=-1.732;QD=27.51;ReadPosRankSum=1.719;VQSLOD=3.3214;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,19:17:33.04:437,33,0	1/1:0,6:6:12.04:168,12,0	0/0:1,0:1:0.47:0,0,1	./.	1/1:1,26:26:56.88:690,57,0	1/1:1,14:12:30.03:395,30,0	1/1:4,4:7:9.03:126,9,0	1/1:3,23:25:69.19:943,69,0	1/1:0,15:14:36.01:457,36,0	1/1:4,28:27:72.17:979,72,0	1/1:0,17:16:30.03:395,30,0	1/1:2,9:10:23.96:288,24,0	1/1:3,16:19:48.09:647,48,0	1/1:2,11:12:21:269,21,0	1/1:0,13:13:30.03:395,30,0	1/1:0,16:16:27.09:377,27,0	1/1:1,4:4:6.02:84,6,0	1/1:0,2:2:6.02:84,6,0	1/1:3,15:16:42.08:547,42,0	1/1:2,19:19:30.10:419,30,0	1/1:0,6:5:12.04:168,12,0	1/1:0,11:11:33.11:461,33,0	1/1:2,10:12:17.97:226,18,0	1/1:0,6:6:12.04:168,12,0	1/1:1,14:13:27.02:353,27,0	1/1:2,18:19:54.05:705,54,0	1/1:0,12:12:21.07:293,21,0	1/1:0,7:7:15:187,15,0
chr10	47736881	.	AAATAAT	A	1132.51	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.023;DP=454;FS=9.995;HRun=0;HaplotypeScore=92.6361;InbreedingCoeff=0.6371;MQ=70.12;MQ0=0;MQRankSum=-6.614;QD=41.94;ReadPosRankSum=1.617;VQSLOD=2.6583;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:57.18:0,57,1835	0/0:12,0:12:30.10:0,30,1007	0/0:12,0:13:10.82:0,11,553	0/0:4,0:4:3.01:0,3,90	0/0:31,0:33:84.23:0,84,2597	0/0:17,0:17:42.13:0,42,1333	0/0:9,0:9:24.08:0,24,797	0/0:26,0:26:54.18:0,54,1738	0/0:11,0:11:27.08:0,27,799	0/0:26,0:26:69.24:0,69,2316	0/0:20,0:20:51.18:0,51,1711	0/0:11,0:11:27.09:0,27,906	0/0:20,0:20:45.15:0,45,1499	0/0:11,0:12:30.05:0,30,923	0/0:8,0:8:21.06:0,21,629	1/1:8,19:27:57.20:1227,57,0	0/0:28,0:28:75.26:0,75,2424	0/0:17,0:18:51.17:0,51,1640	0/0:23,0:23:51.18:0,51,1662	0/0:34,0:34:87.28:0,87,2841	0/0:4,0:4:9.03:0,9,302	0/0:2,0:2:3.01:0,3,101	0/0:8,0:8:15.05:0,15,503	0/0:3,0:3:9.03:0,9,302	0/0:15,0:15:30.10:0,30,1007	0/0:22,0:23:60.15:0,60,1880	0/0:16,0:16:39.13:0,39,1256	0/0:7,0:7:15.05:0,15,503
chr10	47740414	.	G	GA	566.57	PASS	AB=0.705;AC=10;AF=0.185;AN=54;BaseQRankSum=-0.944;DP=479;FS=2.369;HRun=14;HaplotypeScore=71.0154;InbreedingCoeff=0.3980;MQ=50.94;MQ0=21;MQRankSum=-3.637;QD=4.93;ReadPosRankSum=0.513;VQSLOD=2.1940;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:38:46.33:0,46,282	0/0:6,0:7:7.92:0,8,44	0/0:11,0:1:0.47:0,0,1	./.	0/0:15,0:16:21.42:0,21,124	0/0:14,0:15:13.29:0,13,82	0/0:23,1:27:3.97:0,4,137	0/0:21,0:22:31.27:0,31,197	1/1:8,10:17:21:184,21,0	0/1:19,1:20:7.10:7,0,162	0/0:12,0:12:16.54:0,17,99	0/1:7,14:22:43.55:59,0,44	1/1:1,5:6:9:79,9,0	0/0:12,0:12:17.61:0,18,115	0/0:17,0:18:28.20:0,28,168	0/0:10,0:10:14.75:0,15,96	0/0:20,0:21:6.01:0,6,111	0/0:13,0:13:27.29:0,27,174	0/0:15,0:19:36.47:0,36,201	0/0:8,0:8:16.80:0,17,101	0/0:7,0:7:5.86:0,6,38	0/1:8,10:18:31.92:108,0,32	1/1:2,11:15:12.42:149,12,0	0/1:5,10:16:34.50:129,0,35	0/0:18,0:17:23.45:0,23,150	0/0:25,0:28:33.63:0,34,192	0/0:21,0:22:5.21:0,5,150	0/0:16,0:15:24.68:0,25,146
chr10	47741073	.	C	CAA	1607.61	PASS	AB=0.993;AC=37;AF=0.661;AN=56;BaseQRankSum=1.923;DP=595;FS=0.000;HRun=16;HaplotypeScore=123.3862;InbreedingCoeff=0.2844;MQ=49.03;MQ0=16;MQRankSum=-4.029;QD=3.68;ReadPosRankSum=-1.888;VQSLOD=-0.3061;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:24:33.79:241,34,0	1/1:6,0:8:1.79:17,2,0	0/0:45,0:8:11.22:0,11,61	0/0:31,0:8:2.54:0,3,19	1/1:27,0:27:30.12:204,30,0	1/1:16,0:16:3.48:94,3,0	1/1:14,0:13:2.65:38,3,0	1/1:26,0:26:28.88:196,29,0	0/0:20,0:20:8.88:0,9,74	1/1:22,0:21:24.13:137,24,0	1/1:24,0:26:10.42:104,10,0	0/1:16,0:15:11.52:12,0,18	0/1:17,0:17:4.41:4,0,29	0/1:16,0:16:8.61:9,0,72	1/1:12,9:21:5.86:60,6,0	1/1:15,0:17:9.23:118,9,0	1/1:18,0:17:15.06:64,15,0	1/1:3,1:16:0.66:57,1,0	0/1:18,0:18:7.11:7,0,98	0/0:26,0:26:7.12:0,7,175	0/0:12,0:14:14.03:0,14,91	0/1:24,0:24:22.59:23,0,47	0/1:17,0:18:5.96:6,0,20	0/1:21,0:21:23.97:32,0,24	1/1:17,1:18:18.84:122,19,0	1/1:24,0:22:20.08:123,20,0	0/0:18,0:19:1.06:0,1,107	1/1:9,0:24:17.22:111,17,0
chr10	47741085	.	AAAAAG	A	2274.90	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=-4.866;DP=567;FS=0.968;HRun=0;HaplotypeScore=137.9885;InbreedingCoeff=0.1116;MQ=49.45;MQ0=16;MQRankSum=2.892;QD=7.27;ReadPosRankSum=-4.353;VQSLOD=0.6250;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:27:22.31:0,22,163	0/1:6,0:6:11.26:11,0,131	0/0:42,0:9:11.78:0,12,92	0/0:25,0:6:2.56:0,3,29	0/0:25,0:24:2.52:0,3,153	0/1:16,0:16:22.44:22,0,232	0/1:12,0:11:52.29:52,0,61	0/1:24,0:24:15.39:51,0,15	1/1:19,0:19:37.68:401,38,0	0/1:22,0:21:3.01:3,0,165	0/1:25,0:24:30.32:30,0,174	1/1:15,0:14:29.74:366,30,0	1/1:15,2:17:35.65:360,36,0	0/0:18,0:18:35.88:0,36,590	0/1:21,0:21:34.78:35,0,180	0/0:16,0:16:0.92:0,1,304	0/0:17,0:15:0.76:0,1,168	0/1:14,0:14:33.23:33,0,120	0/0:19,0:18:31.12:0,31,519	0/0:28,0:28:56.93:0,57,892	0/0:17,0:17:30.07:0,30,524	1/1:9,12:21:35.10:343,35,0	1/1:6,14:20:2.59:181,3,0	1/1:22,1:23:46.55:499,47,0	0/1:16,0:16:3.17:3,0,179	0/1:23,0:22:51.23:51,0,103	0/0:19,0:19:49.02:0,49,950	0/1:19,0:18:6.80:7,0,132
chr10	47741089	.	AG	A	4994.07	PASS	AB=1.000;AC=43;AF=0.768;AN=56;BaseQRankSum=5.548;DP=538;FS=8.757;HRun=1;HaplotypeScore=98.0514;InbreedingCoeff=0.8249;MQ=48.25;MQ0=13;MQRankSum=-4.463;QD=12.27;ReadPosRankSum=-2.490;VQSLOD=2.0547;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:27,1:28:45.97:315,46,0	1/1:6,0:6:15.28:89,15,0	0/0:32,2:9:8.67:0,9,93	0/0:19,2:4:1.01:0,1,7	1/1:25,1:25:55.06:347,55,0	1/1:16,0:16:32.56:217,33,0	1/1:12,0:11:26.29:178,26,0	1/1:22,2:24:61.78:415,62,0	1/1:20,0:20:35.09:274,35,0	1/1:20,0:19:36.42:244,36,0	1/1:23,2:24:41.14:257,41,0	1/1:9,3:11:32.83:277,33,0	1/1:16,0:16:39.33:265,39,0	0/0:15,1:16:34.38:0,34,282	1/1:24,0:24:32.77:224,33,0	1/1:16,0:16:41.01:229,41,0	1/1:16,0:15:31.09:166,31,0	1/1:13,1:14:18.68:112,19,0	0/1:20,0:19:12.57:13,0,280	0/0:27,0:27:42.24:0,42,484	0/0:14,0:14:27.72:0,28,238	1/1:18,1:19:7.34:202,7,0	1/1:19,1:20:20.97:120,21,0	1/1:17,3:20:50.68:413,51,0	1/1:16,2:18:41.43:239,41,0	1/1:22,1:22:50.76:319,51,0	0/0:18,1:19:28.36:0,28,322	1/1:12,0:12:16.03:79,16,0
chr10	47741090	.	GA	G	462.34	PASS	AB=0.976;AC=12;AF=0.214;AN=56;BaseQRankSum=2.421;DP=536;FS=12.623;HRun=16;HaplotypeScore=114.1961;InbreedingCoeff=0.5406;MQ=48.43;MQ0=13;MQRankSum=-0.242;QD=3.15;ReadPosRankSum=1.278;VQSLOD=-0.4609;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:22,5:27:4.54:193,5,0	0/0:6,0:6:11.05:0,11,66	0/0:33,0:9:11.81:0,12,110	0/0:20,0:4:8.66:0,9,60	0/0:26,0:25:19.74:0,20,99	0/0:18,0:18:27.29:0,27,173	0/0:12,0:11:2.59:0,3,37	0/0:25,0:25:9.06:0,9,53	0/1:19,1:20:14.07:85,0,14	0/0:20,0:19:15.63:0,16,121	0/0:26,0:25:5.72:0,6,91	1/1:12,0:11:8.91:51,9,0	0/1:15,0:15:6.26:54,0,6	0/0:16,0:16:35.99:0,36,443	0/0:23,0:24:12.30:0,12,94	0/0:16,0:16:21.27:0,21,142	0/1:16,0:15:0.33:0,0,95	0/0:14,0:14:10.51:0,11,51	0/0:20,0:19:35.22:0,35,527	0/0:28,0:28:61.08:0,61,735	0/0:12,0:12:30.09:0,30,397	1/1:17,1:18:14.31:64,14,0	0/1:19,1:20:1.21:28,0,1	1/1:17,2:19:20.18:144,20,0	0/0:18,0:18:20.70:0,21,118	0/0:23,0:22:6.86:0,7,105	0/0:19,0:19:48.56:0,49,602	0/0:12,0:12:14.50:0,15,85
chr10	47741091	.	A	AG	114.08	PASS	AB=0.683;AC=1;AF=0.018;AN=56;BaseQRankSum=1.619;DP=541;FS=10.024;HRun=1;HaplotypeScore=119.2419;InbreedingCoeff=-0.0245;MQ=48.79;MQ0=13;MQRankSum=-0.645;QD=4.07;ReadPosRankSum=2.620;VQSLOD=-0.2259;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:15,12:28:71.73:188,0,72	0/0:6,0:6:9.81:0,10,83	0/0:31,0:9:13.80:0,14,129	0/0:21,0:4:7.88:0,8,54	0/0:26,0:25:50.13:0,50,286	0/0:18,0:18:41.30:0,41,279	0/0:13,0:12:23.64:0,24,147	0/0:26,0:26:48.10:0,48,298	0/0:20,0:20:43.98:0,44,253	0/0:20,0:19:42.94:0,43,281	0/0:26,0:25:30.44:0,30,201	0/0:11,0:11:29.52:0,30,161	0/0:16,0:16:34.79:0,35,199	0/0:16,0:16:32.22:0,32,452	0/0:25,0:25:37.98:0,38,240	0/0:16,0:16:31.97:0,32,243	0/0:16,0:15:33.75:0,34,189	0/0:14,0:14:19.75:0,20,123	0/0:20,0:19:43.14:0,43,602	0/0:28,0:28:63.98:0,64,785	0/0:12,0:12:30.10:0,30,419	0/0:19,0:19:23.34:0,23,164	0/0:20,0:20:15.69:0,16,84	0/0:19,0:19:38.79:0,39,217	0/0:18,0:18:38.05:0,38,199	0/0:23,0:22:49.12:0,49,303	0/0:20,0:20:47.78:0,48,594	0/0:12,0:12:18.25:0,18,106
chr10	47742504	.	T	TAA	509.53	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-0.844;DP=486;FS=1.938;HRun=11;HaplotypeScore=61.9599;InbreedingCoeff=0.7493;MQ=61.56;MQ0=1;MQRankSum=0.084;QD=21.23;ReadPosRankSum=-4.972;VQSLOD=1.7363;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:57.03:0,57,553	0/0:6,0:7:5.94:0,6,108	0/0:14,0:9:11.98:0,12,116	0/0:6,0:5:2.84:0,3,15	0/0:29,0:30:77.75:0,78,725	0/0:15,0:15:39.05:0,39,378	0/0:16,0:16:39.13:0,39,402	1/1:8,14:24:43.69:604,44,0	0/0:17,0:19:47.76:0,48,448	0/0:24,0:24:42.81:0,43,429	0/0:17,0:17:38.60:0,39,338	0/0:14,0:14:36.04:0,36,349	0/0:13,0:13:33.04:0,33,320	0/0:18,0:18:29.92:0,30,291	0/0:17,0:17:42.04:0,42,401	0/0:15,0:15:42.05:0,42,407	0/0:21,0:23:59.83:0,60,564	0/0:13,0:13:33:0,33,319	0/0:15,0:15:39.02:0,39,378	0/0:39,0:39:95.34:0,95,920	0/0:12,0:12:27.02:0,27,262	0/0:16,0:16:34.18:0,34,386	0/0:11,0:12:32.77:0,33,303	0/0:6,0:6:14.96:0,15,135	0/0:10,0:10:24:0,24,233	0/0:27,0:27:72.07:0,72,695	0/0:15,0:15:38.98:0,39,355	0/0:19,0:19:41.98:0,42,407
chr10	47742573	.	C	CT	747.69	PASS	AB=0.885;AC=7;AF=0.125;AN=56;BaseQRankSum=-0.159;DP=500;FS=1.231;HRun=10;HaplotypeScore=56.2254;InbreedingCoeff=0.4428;MQ=75.62;MQ0=2;MQRankSum=-1.880;QD=9.59;ReadPosRankSum=-2.634;VQSLOD=1.6687;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,2:29:48.70:278,49,0	0/1:5,1:6:17:17,0,84	0/0:20,0:18:11.67:0,12,163	0/0:15,0:12:14.90:0,15,109	0/0:27,0:27:56.87:0,57,468	0/0:15,0:15:32.91:0,33,267	0/1:7,1:8:20:20,0,62	1/1:5,20:25:54.10:563,54,0	0/0:13,1:14:3.98:0,4,239	0/0:21,0:21:47.91:0,48,392	0/0:20,1:21:18.86:0,19,362	0/0:15,0:15:32.93:0,33,271	0/1:9,1:10:8.09:8,0,141	0/0:15,1:16:17.06:0,17,295	0/0:16,1:17:18.96:0,19,362	0/0:13,0:13:32.17:0,32,253	0/0:30,0:30:74.86:0,75,611	0/0:21,0:21:47.89:0,48,389	0/0:20,1:21:25.39:0,25,407	0/0:33,0:34:69.42:0,69,547	0/0:2,0:4:1.25:0,1,28	0/0:9,0:10:26:0,26,203	0/0:19,0:19:50.94:0,51,419	0/0:11,0:11:32.93:0,33,266	0/0:12,0:12:35.96:0,36,296	0/0:26,0:26:62.88:0,63,517	0/0:26,0:26:65.88:0,66,541	0/0:13,0:13:23.94:0,24,197
chr10	47743076	.	CG	C	4413.59	PASS	AC=42;AF=0.778;AN=54;BaseQRankSum=-2.833;DP=455;FS=1.048;HRun=3;HaplotypeScore=61.2705;InbreedingCoeff=0.8833;MQ=48.22;MQ0=8;MQRankSum=0.817;QD=12.98;ReadPosRankSum=0.514;VQSLOD=3.2634;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:28,2:27:20.85:194,21,0	1/1:3,0:3:5.93:46,6,0	0/0:9,0:1:2.37:0,2,8	./.	1/1:14,3:17:31.04:246,31,0	1/1:12,3:14:32.98:283,33,0	1/1:8,8:16:12.02:130,12,0	1/1:24,1:25:59.12:457,59,0	1/1:13,2:15:27.70:207,28,0	1/1:4,17:21:33.77:295,34,0	1/1:2,13:15:24.61:197,25,0	1/1:6,0:6:11.84:80,12,0	1/1:13,5:18:26.66:221,27,0	0/0:15,0:15:29.19:0,29,273	1/1:3,10:13:5.07:71,5,0	1/1:10,1:10:22.35:165,22,0	1/1:19,5:22:42.65:373,43,0	1/1:4,15:18:21.02:213,21,0	0/0:26,0:26:63.65:0,64,545	0/0:20,0:20:41.41:0,41,365	0/0:27,0:27:53.91:0,54,437	1/1:5,7:10:14.87:135,15,0	1/1:12,4:15:29.49:237,29,0	1/1:17,4:20:41.35:333,41,0	1/1:3,10:13:10.22:94,10,0	1/1:3,17:20:40.86:318,41,0	0/0:18,0:18:42.01:0,42,341	1/1:5,5:9:12.02:120,12,0
chr10	47743078	.	GGA	G	2731.54	PASS	AB=0.897;AC=23;AF=0.426;AN=54;BaseQRankSum=2.002;DP=498;FS=35.909;HRun=0;HaplotypeScore=70.9880;InbreedingCoeff=-0.3614;MQ=49.70;MQ0=8;MQRankSum=0.808;QD=7.28;ReadPosRankSum=6.362;VQSLOD=1.2195;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:5,26:29:0.84:236,0,1	0/1:1,3:4:12.85:54,0,13	0/0:10,0:1:2.84:0,3,14	./.	0/1:14,2:17:32.68:157,0,33	0/1:17,0:17:29.86:207,0,30	0/1:14,2:17:16.02:99,0,16	1/1:19,4:24:30.15:379,30,0	0/1:16,0:16:63.78:110,0,64	1/1:20,1:21:0.47:201,0,0	0/1:18,0:18:2.81:114,0,3	0/1:8,0:8:28.74:46,0,29	0/1:20,0:20:60.85:116,0,61	0/0:15,0:15:29.99:0,30,337	0/1:14,1:15:7.14:7,0,61	0/1:13,1:13:58.04:128,0,58	0/1:22,4:25:64.18:213,0,64	0/1:19,1:20:15.53:132,0,16	0/0:28,0:28:76.21:0,76,782	0/0:21,0:21:52.24:0,52,503	0/0:27,0:27:61.35:0,61,619	0/1:13,1:12:27.42:71,0,27	0/1:16,1:16:5.26:111,0,5	0/1:25,1:25:99:161,0,103	0/1:15,0:15:5.87:6,0,58	0/1:21,0:21:28.35:229,0,28	0/0:22,0:22:56.93:0,57,542	0/1:8,1:10:6.62:109,0,7
chr10	47744966	.	TTTTGG	T	5767.84	PASS	AB=0.750;AC=33;AF=0.589;AN=56;BaseQRankSum=10.798;DP=725;FS=9.555;HRun=0;HaplotypeScore=125.0750;InbreedingCoeff=0.8262;MQ=59.73;MQ0=13;MQRankSum=-1.527;QD=14.07;ReadPosRankSum=-1.511;VQSLOD=3.6183;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:14,26:40:27.09:487,27,0	0/0:12,0:12:18.05:0,18,448	0/0:44,0:22:0.47:0,0,1	0/0:64,0:23:5.97:0,6,45	1/1:10,18:27:36.01:517,36,0	0/0:20,0:20:24.06:0,24,484	0/0:37,0:37:45.13:0,45,1002	1/1:37,0:36:24.03:230,24,0	1/1:18,9:27:15.05:268,15,0	1/1:8,10:18:29.95:367,30,0	1/1:7,16:23:33:435,33,0	1/1:8,14:22:21.07:376,21,0	1/1:6,8:14:8.61:162,9,0	0/0:22,0:22:42.11:0,42,857	0/0:32,0:32:42.08:0,42,970	1/1:12,10:22:14.78:271,15,0	1/1:11,22:33:24.08:419,24,0	0/1:20,10:30:5.90:202,0,6	0/0:19,0:17:18.05:0,18,371	0/0:17,0:17:18.01:0,18,339	0/0:18,0:17:39.13:0,39,945	1/1:7,9:16:24.04:331,24,0	1/1:12,6:18:2.52:53,3,0	1/1:7,27:34:32.76:595,33,0	1/1:4,4:8:6.02:108,6,0	1/1:15,21:36:57.09:838,57,0	0/0:30,0:30:51.12:0,51,1237	1/1:0,4:4:6.02:108,6,0
chr10	47745221	.	TA	T	2322.32	PASS	AB=0.823;AC=41;AF=0.732;AN=56;BaseQRankSum=2.355;DP=484;FS=2.485;HRun=15;HaplotypeScore=60.7099;InbreedingCoeff=0.4708;MQ=73.10;MQ0=3;MQRankSum=3.098;QD=5.79;ReadPosRankSum=3.616;VQSLOD=2.5507;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:24,3:27:22.22:22,0,296	1/1:2,6:8:14.76:94,15,0	0/1:24,0:10:5.31:5,0,37	0/1:28,0:19:15.42:16,0,15	1/1:9,11:21:19.45:117,19,0	1/1:6,4:10:4.14:87,4,0	1/1:6,11:17:2.59:135,3,0	1/1:10,14:24:35.08:229,35,0	1/1:4,5:9:5.85:38,6,0	1/1:10,9:19:22.57:140,23,0	0/1:5,13:18:0.94:124,0,1	1/1:6,11:17:26.52:172,27,0	1/1:5,4:8:11.67:77,12,0	0/0:11,0:11:10.19:0,10,71	1/1:9,9:18:11.20:89,11,0	1/1:3,7:10:11.77:77,12,0	1/1:8,17:25:41.03:271,41,0	1/1:7,16:23:12.06:203,12,0	0/0:17,0:16:29.96:0,30,251	0/0:14,0:14:31.77:0,32,255	0/0:17,3:20:3.18:0,3,125	1/1:5,5:10:10.84:63,11,0	0/1:8,10:19:6.88:82,0,7	1/1:9,2:13:23.99:131,24,0	1/1:4,9:13:17.68:115,18,0	1/1:13,12:25:26.48:170,26,0	0/0:17,0:21:38.63:0,39,306	1/1:5,5:10:5.75:38,6,0
chr10	47745407	.	AAC	A	1010.83	PASS	AB=0.792;AC=28;AF=0.538;AN=52;BaseQRankSum=-0.642;DP=447;FS=15.222;HRun=0;HaplotypeScore=62.8057;InbreedingCoeff=0.5605;MQ=73.60;MQ0=6;MQRankSum=-0.179;QD=4.84;ReadPosRankSum=0.826;VQSLOD=1.1743;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:26,1:24:17.82:149,18,0	0/0:5,0:5:8.99:0,9,87	./.	./.	1/1:7,5:12:12.03:129,12,0	0/0:25,0:25:17.99:0,18,175	0/0:9,0:17:9.01:0,9,97	0/0:30,0:30:2.98:0,3,21	0/0:10,0:13:3.01:0,3,42	1/1:11,5:16:14.97:133,15,0	1/1:16,0:16:7.53:50,8,0	0/0:18,0:18:5.95:0,6,59	0/0:9,0:12:6:0,6,68	1/1:5,2:7:3.01:32,3,0	0/0:13,0:23:12.01:0,12,123	1/1:3,1:14:17.21:102,17,0	1/1:16,1:18:6.45:66,6,0	0/1:8,2:10:23.47:23,0,25	1/1:12,0:16:8.80:57,9,0	1/1:11,4:16:8.86:79,9,0	1/1:17,0:17:17.91:146,18,0	0/0:11,0:11:3:0,3,25	0/0:20,0:19:8.98:0,9,72	0/0:13,0:21:5.99:0,6,50	0/1:8,4:12:15.92:56,0,16	1/1:13,3:16:9.45:80,9,0	1/1:4,3:7:5.81:64,6,0	1/1:4,0:4:2.99:24,3,0
chr10	47745426	.	A	ACA	337.20	PASS	AB=1.000;AC=13;AF=0.260;AN=50;BaseQRankSum=-3.453;DP=502;FS=8.315;HRun=0;HaplotypeScore=75.8353;InbreedingCoeff=0.2160;MQ=52.66;MQ0=12;MQRankSum=-1.223;QD=2.13;ReadPosRankSum=-1.127;VQSLOD=0.2757;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:36:17.58:0,18,115	0/1:6,0:6:11.36:24,0,11	./.	./.	0/0:18,0:18:11.36:0,11,56	0/1:23,0:23:26.30:52,0,26	0/1:20,0:20:23.13:79,0,23	0/0:22,0:22:2.92:0,3,17	./.	0/0:18,0:18:11.29:0,11,65	0/0:14,0:14:5.94:0,6,41	1/1:9,5:16:3.01:39,3,0	0/0:10,0:9:2.99:0,3,23	0/0:12,0:12:2.84:0,3,14	0/1:28,0:28:11.32:120,0,11	0/0:20,0:20:17.04:0,17,84	0/0:27,0:27:6.46:0,6,45	0/1:11,0:11:4.78:5,0,8	0/0:21,0:21:7.99:0,8,49	0/0:24,0:23:8.52:0,9,42	0/0:25,0:24:17.72:0,18,119	1/1:11,0:11:3:27,3,0	1/1:18,0:17:8.99:88,9,0	1/1:25,0:25:3.01:41,3,0	0/0:10,0:10:5.68:0,6,28	0/0:22,0:22:8.77:0,9,54	0/0:12,0:12:5.52:0,6,28	0/0:6,0:6:0.47:0,0,1
chr10	47745987	.	CT	C	748.55	PASS	AB=0.759;AC=18;AF=0.321;AN=56;BaseQRankSum=-2.561;DP=516;FS=1.114;HRun=17;HaplotypeScore=80.8622;InbreedingCoeff=0.5452;MQ=63.30;MQ0=15;MQRankSum=1.960;QD=3.20;ReadPosRankSum=3.052;VQSLOD=-0.0856;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:36:52.50:0,52,271	0/0:4,0:9:14.61:0,15,93	1/1:18,0:11:2.67:16,3,0	0/0:16,0:9:2.87:0,3,16	1/1:12,8:21:20.40:100,20,0	0/0:14,0:22:23.39:0,23,121	0/0:7,0:16:21.49:0,21,110	1/1:18,14:29:28.72:166,29,0	0/0:14,0:14:15.36:0,15,113	0/1:12,8:21:12.77:92,0,13	1/1:6,6:12:17.41:100,17,0	0/0:14,0:13:26.07:0,26,187	0/0:10,2:11:10.03:0,10,135	0/0:12,0:12:14.86:0,15,110	0/0:8,0:11:11.63:0,12,61	0/0:15,1:16:16.09:0,16,215	1/1:27,8:35:14.51:184,15,0	1/1:2,10:14:0.64:88,1,0	0/1:22,1:22:1.58:2,0,161	0/0:8,0:9:12.71:0,13,88	0/0:14,1:15:7.92:0,8,138	0/0:15,0:14:22.97:0,23,142	0/0:22,0:21:15.73:0,16,109	0/0:19,0:22:18.35:0,18,136	0/1:6,7:17:40.43:47,0,40	0/1:19,5:27:16.99:84,0,17	0/0:15,0:14:8.10:0,8,84	1/1:2,7:7:8.73:50,9,0
chr10	47746096	.	CT	C	1912.04	PASS	AC=16;AF=0.296;AN=54;BaseQRankSum=5.908;DP=453;FS=4.118;HRun=12;HaplotypeScore=47.4248;InbreedingCoeff=0.9337;MQ=59.62;MQ0=16;MQRankSum=1.683;QD=13.86;ReadPosRankSum=2.148;VQSLOD=3.9569;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,1:36:81.59:0,82,810	0/0:4,0:4:6:0,6,56	0/0:21,0:7:5.97:0,6,51	0/0:11,0:4:5.98:0,6,52	1/1:1,9:10:20.92:163,21,0	0/0:19,1:20:48.06:0,48,477	0/0:16,0:17:41.92:0,42,410	0/0:24,0:23:48.08:0,48,477	0/0:13,0:12:19.55:0,20,176	1/1:4,8:12:13.91:173,14,0	1/1:2,11:13:26.87:209,27,0	0/0:19,0:19:40.90:0,41,401	0/0:9,0:9:19.84:0,20,181	0/0:15,0:14:21.04:0,21,213	0/0:21,0:20:39.04:0,39,375	1/1:6,11:17:24.60:205,25,0	1/1:10,32:41:52.07:578,52,0	1/1:3,14:16:38.84:302,39,0	0/0:19,1:19:24.86:0,25,434	0/0:18,0:19:41.99:0,42,408	0/0:17,1:18:21.84:0,22,398	0/0:7,0:6:12.02:0,12,122	0/0:12,0:12:27.04:0,27,267	0/0:11,0:10:30.05:0,30,298	1/1:2,8:10:23.89:186,24,0	1/1:3,14:15:38.81:298,39,0	0/0:13,0:14:26.87:0,27,249	./.
chr10	47746281	.	CCT	C	2569.34	PASS	AB=1.000;AC=45;AF=0.804;AN=56;BaseQRankSum=-4.834;DP=393;FS=26.670;HRun=0;HaplotypeScore=55.4634;InbreedingCoeff=0.0592;MQ=62.47;MQ0=14;MQRankSum=-0.191;QD=7.56;ReadPosRankSum=-2.230;VQSLOD=1.2219;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:15,5:20:26.06:239,26,0	1/1:6,0:6:8.15:46,8,0	0/1:70,0:21:5.45:5,0,231	0/0:47,0:13:6.28:0,6,79	1/1:21,0:18:1.97:140,2,0	1/1:5,7:12:17.80:162,18,0	1/1:6,9:16:20.85:210,21,0	1/1:19,0:19:32.37:340,32,0	1/1:6,1:6:8.10:48,8,0	0/1:12,0:11:17.93:33,0,18	0/1:10,0:10:19.16:30,0,19	1/1:9,0:7:11.74:90,12,0	1/1:4,1:4:8.96:72,9,0	0/1:7,0:7:30.23:30,0,44	1/1:1,12:13:15.03:207,15,0	1/1:3,12:15:15.01:163,15,0	0/1:11,0:10:11.42:97,0,11	1/1:5,1:6:1.93:64,2,0	0/1:12,0:11:4.25:72,0,4	0/0:6,0:6:2.90:0,3,16	1/1:6,0:6:0.89:86,1,0	1/1:6,0:5:10.56:76,11,0	1/1:8,0:7:12.77:129,13,0	1/1:10,0:10:5.74:39,6,0	1/1:11,0:9:2.74:12,3,0	1/1:14,1:13:20.27:185,20,0	0/1:8,0:8:4.27:57,0,4	1/1:5,0:5:9:77,9,0
chr10	47746542	.	A	AT	1492.69	PASS	AC=26;AF=0.684;AN=38;BaseQRankSum=-2.063;DP=296;FS=0.000;HRun=8;HaplotypeScore=30.4204;InbreedingCoeff=0.6352;MQ=22.64;MQ0=145;MQRankSum=0.384;QD=9.63;ReadPosRankSum=2.063;VQSLOD=0.1816;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,16:3:3.01:35,3,0	0/0:6,0:6:12:0,12,109	./.	./.	1/1:1,14:12:11.99:120,12,0	0/0:16,0:10:11.93:0,12,97	0/0:8,0:1:3:0,3,27	./.	./.	1/1:2,14:13:33.10:380,33,0	1/1:0,7:4:2.97:20,3,0	1/1:1,6:3:3.01:34,3,0	1/1:0,5:3:2.80:34,3,0	0/0:8,0:5:3:0,3,27	./.	1/1:0,5:4:6.02:69,6,0	1/1:5,14:4:3.01:35,3,0	1/1:0,8:4:6.02:69,6,0	./.	0/0:12,0:11:17.96:0,18,155	./.	1/1:2,11:8:12.04:137,12,0	1/1:1,7:8:8.73:83,9,0	./.	1/1:1,16:14:15.04:170,15,0	1/1:1,16:13:39.12:450,39,0	0/0:16,0:13:15.01:0,15,137	./.
chr10	47746734	.	C	CG	747.94	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-0.650;DP=524;FS=5.683;HRun=3;HaplotypeScore=74.7336;InbreedingCoeff=0.8997;MQ=52.16;MQ0=23;MQRankSum=0.291;QD=29.92;ReadPosRankSum=-4.602;VQSLOD=1.3426;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:34:90.27:0,90,1072	0/0:3,0:3:6.02:0,6,72	0/0:17,0:12:30.09:0,30,357	0/0:15,0:14:28.37:0,28,417	0/0:13,0:11:33.10:0,33,395	0/0:25,0:23:66.20:0,66,790	0/0:21,0:19:54.17:0,54,646	1/1:1,24:21:63.17:843,63,0	0/0:14,0:13:36.11:0,36,431	0/0:25,0:25:72.22:0,72,863	0/0:9,0:9:24.06:0,24,276	0/0:18,0:17:48.15:0,48,574	0/0:14,0:14:42.13:0,42,499	0/0:22,0:22:63.19:0,63,754	0/0:27,0:27:63.19:0,63,754	0/0:14,0:14:36.11:0,36,430	0/0:29,0:28:75.23:0,75,894	0/0:17,0:17:48.12:0,48,561	0/0:14,0:10:30.09:0,30,356	0/0:12,0:12:33.10:0,33,395	0/0:38,0:37:99:0,99,1187	0/0:11,0:10:30.09:0,30,352	0/0:13,0:13:30.09:0,30,359	0/0:13,0:12:27.08:0,27,323	0/0:18,0:13:39.12:0,39,468	0/0:20,0:19:54.17:0,54,647	0/0:30,0:30:78.24:0,78,934	0/0:12,0:12:36.11:0,36,432
chr10	47748994	.	TTCTCTCTC	T	363.36	PASS	AB=0.961;AC=11;AF=0.212;AN=52;BaseQRankSum=3.565;DP=513;FS=12.086;HRun=0;HaplotypeScore=119.0917;InbreedingCoeff=0.1887;MQ=65.22;MQ0=11;MQRankSum=-2.962;QD=3.00;ReadPosRankSum=0.678;VQSLOD=1.8639;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:14.80:0,15,160	0/1:7,0:7:0:0,0,0	./.	./.	0/0:22,0:22:10.85:0,11,355	0/1:14,0:15:31.95:99,0,32	1/1:9,3:11:6.02:148,6,0	0/0:25,0:25:3.92:0,4,22	0/0:11,0:12:2.88:0,3,15	0/0:24,0:24:18.52:0,19,561	0/0:12,0:12:0:0,0,0	0/1:7,0:7:5.22:6,0,5	0/0:11,0:13:3.79:0,4,17	0/0:15,0:15:9:0,9,78	1/1:15,5:20:9.02:168,9,0	0/0:21,0:21:3.01:0,3,122	0/0:26,0:30:21.04:0,21,617	0/0:15,0:13:7.23:0,7,88	0/0:20,0:19:16.83:0,17,241	0/1:16,0:15:4.98:5,0,87	0/0:17,0:17:9.02:0,9,161	0/1:11,0:12:6.75:7,0,42	0/1:13,0:13:6.79:7,0,83	0/0:23,0:24:14.96:0,15,122	0/0:15,0:15:18.05:0,18,449	0/0:18,0:20:15.13:0,15,329	0/1:16,1:19:52.66:53,0,130	0/0:15,0:15:11.97:0,12,244
chr10	47749477	.	T	TTTGTTGTTG	6796.44	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=1.663;DP=670;FS=2.858;HRun=0;HaplotypeScore=177.7612;InbreedingCoeff=0.8627;MQ=66.00;MQ0=1;MQRankSum=-9.586;QD=43.85;ReadPosRankSum=-0.866;VQSLOD=4.6235;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:45:69.18:0,69,1667	0/0:11,0:11:15.02:0,15,351	0/1:36,0:23:19.24:19,0,71	0/0:22,0:13:3:0,3,27	0/0:27,0:27:51.12:0,51,1092	0/0:19,0:19:30.09:0,30,759	0/0:20,0:20:30.02:0,30,587	0/0:36,0:36:21.06:0,21,315	1/1:19,0:23:41.71:999,42,0	0/0:33,0:33:48.11:0,48,986	0/0:20,0:20:30.10:0,30,773	1/1:7,5:12:29.93:1005,30,0	1/1:15,9:24:54.03:1909,54,0	0/0:19,0:19:33.05:0,33,668	0/0:19,0:19:36.10:0,36,869	0/0:11,0:19:30.10:0,30,585	0/0:39,0:39:67.72:0,68,1538	0/0:22,0:22:42.09:0,42,968	0/0:20,0:20:21.07:0,21,521	0/0:20,0:20:36.12:0,36,932	0/0:14,0:14:24.02:0,24,539	1/1:17,7:24:56.54:1590,57,0	1/1:13,0:15:18.06:607,18,0	1/1:19,2:20:26.93:667,27,0	0/0:21,0:21:27.08:0,27,625	0/0:36,0:36:56.18:0,56,1403	0/0:32,0:33:78.14:0,78,1551	0/0:20,0:20:51.18:0,51,1397
chr10	47749558	.	GA	G	1980.46	PASS	AB=0.612;AC=16;AF=0.286;AN=56;BaseQRankSum=-0.616;DP=576;FS=7.970;HRun=14;HaplotypeScore=84.5932;InbreedingCoeff=0.8023;MQ=71.42;MQ0=4;MQRankSum=0.247;QD=10.10;ReadPosRankSum=2.662;VQSLOD=2.9882;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:12,28:41:44.15:395,0,44	0/0:9,0:11:26.82:0,27,228	0/0:21,0:15:19.39:0,19,124	0/0:25,0:14:11.67:0,12,79	0/0:7,0:28:60.77:0,61,363	0/0:14,0:14:30.02:0,30,275	0/0:17,0:18:39.33:0,39,340	0/1:13,16:30:32.10:209,0,32	1/1:1,12:13:29.71:205,30,0	0/0:4,0:21:46.20:0,46,247	0/0:14,0:22:38.76:0,39,207	1/1:3,10:13:26.67:182,27,0	1/1:7,14:23:24.45:275,24,0	0/0:13,1:14:9.54:0,10,298	0/0:17,0:17:39.02:0,39,355	1/1:3,10:14:31.74:209,32,0	0/0:8,0:27:39.19:0,39,264	0/0:9,0:18:40.35:0,40,256	0/0:15,0:16:29.70:0,30,272	0/0:17,1:21:33.08:0,33,410	0/0:10,0:13:26.81:0,27,225	1/1:2,14:17:34.71:232,35,0	1/1:9,11:21:18.73:264,19,0	1/1:5,17:24:11.85:210,12,0	0/0:5,0:23:29.96:0,30,168	0/0:7,0:21:33.79:0,34,194	0/0:30,0:31:33.40:0,33,431	0/0:8,0:16:25.88:0,26,151
chr10	47750731	.	CGTGT	C	972.48	PASS	AB=0.882;AC=18;AF=0.375;AN=48;BaseQRankSum=2.915;DP=529;FS=0.000;HRun=0;HaplotypeScore=105.2743;InbreedingCoeff=0.1758;MQ=59.07;MQ0=27;MQRankSum=0.912;QD=3.86;ReadPosRankSum=0.680;VQSLOD=1.6686;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:24:30.07:0,30,462	./.	./.	./.	1/1:15,2:18:12.03:159,12,0	0/1:14,0:18:21.71:22,0,57	0/0:15,0:20:5.49:0,5,24	0/0:27,0:24:20.39:0,20,133	0/1:15,0:17:18.37:18,0,28	0/0:20,0:20:8.37:0,8,97	0/0:8,0:9:8.54:0,9,50	1/1:15,1:18:16.79:151,17,0	1/1:9,0:11:3:28,3,0	0/0:13,0:14:8.77:0,9,153	0/0:14,0:20:8.50:0,8,75	0/0:11,0:13:3.48:0,3,31	1/1:21,12:32:10.08:291,10,0	0/1:29,3:31:15.19:295,0,15	0/0:16,0:14:2.98:0,3,21	0/1:10,0:10:4.02:4,0,130	0/0:22,0:22:26.96:0,27,448	0/1:12,0:17:16.95:22,0,17	0/1:8,0:11:17.96:22,0,18	0/1:22,0:24:11.45:38,0,11	1/1:14,6:19:2.45:45,2,0	0/1:18,0:18:1.22:32,0,1	0/0:16,0:15:10.38:0,10,167	./.
chr10	47751206	.	G	GT	9789.42	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-16.706;DP=724;FS=2.057;HRun=2;HaplotypeScore=73.5089;InbreedingCoeff=1.0000;MQ=93.71;MQ0=0;MQRankSum=-8.570;QD=38.39;ReadPosRankSum=1.180;VQSLOD=5.5088;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,55:57:99:2197,154,0	0/0:13,0:13:39.12:0,39,483	0/0:36,0:36:93.26:0,93,1118	0/0:29,0:29:66.19:0,66,806	0/0:25,0:25:75.24:0,75,929	0/0:29,0:29:87.27:0,87,1078	0/0:20,0:20:57.16:0,57,693	1/1:2,32:34:90.30:1295,90,0	1/1:0,27:27:78.26:1123,78,0	0/0:31,0:31:87.27:0,87,1078	0/0:15,0:15:45.13:0,45,544	1/1:1,19:20:48.10:660,48,0	1/1:0,21:22:57.12:815,57,0	0/0:26,0:26:72.23:0,72,892	0/0:30,0:30:84.25:0,84,1028	1/1:0,22:22:60.19:864,60,0	0/0:32,0:32:96.29:0,96,1176	0/0:19,0:19:57.18:0,57,706	0/0:22,0:22:60.19:0,60,743	0/0:18,0:18:42.11:0,42,500	0/0:41,0:41:99:0,115,1446	1/1:3,17:20:51.16:718,51,0	1/1:1,13:14:39.13:562,39,0	1/1:0,39:39:99:1555,108,0	0/0:22,0:22:63.20:0,63,781	0/0:32,0:32:90.27:0,90,1102	0/0:16,0:16:48.12:0,48,578	0/0:13,0:13:39.03:0,39,434
chr10	47755121	.	G	GT	682.37	PASS	AB=0.862;AC=5;AF=0.089;AN=56;BaseQRankSum=-3.638;DP=578;FS=0.000;HRun=11;HaplotypeScore=61.2748;InbreedingCoeff=0.4578;MQ=67.53;MQ0=1;MQRankSum=0.263;QD=8.32;ReadPosRankSum=-1.366;VQSLOD=1.7872;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:11,25:36:4.21:496,0,4	0/0:10,0:10:29.89:0,30,232	0/1:12,0:11:3.92:4,0,27	0/1:12,0:10:9:23,0,9	0/0:27,0:27:22.49:0,22,297	0/0:16,0:19:50.94:0,51,366	0/0:14,1:15:5.41:0,5,225	0/0:33,2:35:41.19:0,41,496	0/0:22,0:22:47.79:0,48,371	0/0:18,0:18:12.19:0,12,251	0/0:15,0:15:32.79:0,33,248	0/0:19,0:19:44.79:0,45,348	0/0:15,0:15:38.85:0,39,302	0/0:18,0:18:53.73:0,54,412	0/0:18,0:18:14.41:0,14,290	1/1:8,12:20:28.30:277,28,0	0/0:18,0:18:47.78:0,48,369	0/0:27,0:29:72.72:0,73,542	0/0:16,0:16:29.86:0,30,232	0/0:20,0:20:36.45:0,36,398	0/0:28,1:29:26.81:0,27,405	0/0:20,0:21:52.82:0,53,399	0/0:20,0:21:28.20:0,28,353	0/0:25,0:25:71.72:0,72,557	0/0:19,0:21:51.81:0,52,375	0/0:26,1:27:19.76:0,20,340	0/0:22,0:22:59.65:0,60,456	0/0:16,0:16:35.80:0,36,279
chr10	47757172	.	G	GC	255.96	PASS	AB=0.952;AC=5;AF=0.089;AN=56;BaseQRankSum=6.127;DP=784;FS=2.438;HRun=1;HaplotypeScore=83.9865;InbreedingCoeff=0.7178;MQ=58.23;MQ0=10;MQRankSum=-4.318;QD=6.09;ReadPosRankSum=-2.969;VQSLOD=-0.3692;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,8:13:11.73:159,12,0	0/0:13,0:11:27.07:0,27,335	0/0:18,0:6:15.03:0,15,171	0/1:19,0:3:22.11:22,0,62	0/0:21,0:20:54.18:0,54,701	0/0:22,0:22:63.20:0,63,818	0/0:51,0:51:99:0,150,1914	0/0:14,0:12:0.89:0,1,2	0/0:49,0:49:99:0,141,1829	0/0:34,0:28:78.25:0,78,1012	0/0:13,0:12:30.10:0,30,390	0/0:44,0:44:99:0,132,1699	0/0:43,0:43:99:0,123,1567	0/0:41,0:39:99:0,111,1425	0/0:23,0:23:69.21:0,69,881	1/1:4,4:8:17.97:197,18,0	0/0:25,0:25:72.23:0,72,932	0/0:31,0:31:90.29:0,90,1168	0/0:18,0:17:51.16:0,51,649	0/0:21,0:17:48.12:0,48,618	0/0:114,0:112:99:0,316,4026	0/0:24,0:24:69.21:0,69,881	0/0:9,0:9:27.09:0,27,351	0/0:41,0:41:99:0,117,1515	0/0:21,0:18:39.11:0,39,492	0/0:21,0:18:54.17:0,54,690	0/0:23,0:23:66.21:0,66,845	0/0:8,0:8:15.04:0,15,186
chr10	47757174	.	ATCACCCCCCAGCTGTGCTC	A	1277.01	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=7.237;DP=781;FS=1.724;HRun=0;HaplotypeScore=352.2825;InbreedingCoeff=0.6950;MQ=58.44;MQ0=8;MQRankSum=-1.574;QD=34.51;ReadPosRankSum=-5.063;VQSLOD=1.1147;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:15,0:14:36.26:424,0,36	0/0:11,0:9:27.09:0,27,1036	0/0:17,0:6:18.04:0,18,340	0/0:19,0:4:2.65:0,3,213	0/0:20,0:20:51.18:0,51,1642	0/0:22,0:22:60.18:0,60,2052	0/0:51,0:51:99:0,138,3661	1/1:2,12:12:30.10:607,30,0	0/0:50,0:50:99:0,141,4818	0/0:34,0:28:77.31:0,77,2478	0/0:13,0:12:27.04:0,27,709	0/0:43,0:43:99:0,126,4395	0/0:43,0:43:99:0,120,3778	0/0:37,0:36:99:0,102,3572	0/0:23,0:23:57.18:0,57,1866	1/1:8,0:8:10.54:370,11,0	0/0:25,0:25:75.24:0,75,2913	0/0:31,0:31:84.21:0,84,2842	0/0:19,0:18:54.14:0,54,1706	0/0:20,0:18:48.02:0,48,1593	0/0:113,0:112:99:0,302,9768	0/0:25,0:25:72.21:0,72,2114	0/0:9,0:9:27.09:0,27,1025	0/0:41,0:41:99:0,117,3780	0/0:21,0:18:48.15:0,48,1536	0/0:22,0:20:54.09:0,54,1474	0/0:24,0:24:68.02:0,68,2148	0/0:8,0:8:21.07:0,21,676
chr10	47757191	.	CT	C	1091.12	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.490;DP=796;FS=1.391;HRun=1;HaplotypeScore=89.3505;InbreedingCoeff=0.9969;MQ=62.61;MQ0=1;MQRankSum=-0.973;QD=23.72;ReadPosRankSum=-3.180;VQSLOD=2.7983;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,21:21:20.35:490,20,0	0/0:12,0:12:36.01:0,36,519	0/0:19,0:13:36.10:0,36,512	0/0:22,0:11:26.95:0,27,383	0/0:23,0:23:66.21:0,66,1025	0/0:20,0:20:54.17:0,54,829	0/0:44,0:44:99:0,132,2043	1/1:13,0:12:30.05:355,30,0	0/0:47,0:47:99:0,132,2106	0/0:38,0:38:99:0,108,1714	0/0:12,0:11:30.10:0,30,465	0/0:43,0:43:99:0,129,2036	0/0:40,0:40:99:0,117,1864	0/0:38,0:38:99:0,114,1799	0/0:23,0:23:63.19:0,63,960	1/1:0,12:12:30.10:389,30,0	0/0:32,0:32:96.31:0,96,1511	0/0:26,0:26:75.19:0,75,1148	0/0:23,0:22:66.22:0,66,1041	0/0:19,0:19:54.13:0,54,774	0/0:99,0:97:99:0,286,4539	0/0:29,0:29:84.28:0,84,1320	0/0:15,0:15:45.15:0,45,699	0/0:37,0:37:99:0,108,1694	0/0:23,0:23:66.15:0,66,963	0/0:31,0:31:90.21:0,90,1365	0/0:26,0:26:78.27:0,78,1244	0/0:9,0:9:27.09:0,27,431
chr10	47758762	.	GGTCC	G	2202.18	PASS	AB=0.989;AC=28;AF=0.519;AN=54;BaseQRankSum=-3.210;DP=400;FS=32.640;HRun=0;HaplotypeScore=73.5707;InbreedingCoeff=-0.4984;MQ=39.47;MQ0=37;MQRankSum=-1.131;QD=7.41;ReadPosRankSum=-0.824;VQSLOD=0.5956;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:7,0:5:0.91:56,0,1	0/0:8,0:7:3.10:0,3,80	0/0:49,0:10:24.95:0,25,286	0/0:45,0:4:2.83:0,3,16	0/1:24,0:23:99:179,0,173	0/1:15,0:14:68.25:149,0,68	0/1:13,0:12:16.63:83,0,17	0/1:11,0:11:25.94:91,0,26	0/1:6,0:6:46.53:54,0,47	0/1:19,0:19:45.62:46,0,49	0/1:17,1:18:35.46:127,0,35	1/1:5,0:3:2.90:16,3,0	1/1:6,1:5:12.03:139,12,0	0/1:8,1:9:46.16:46,0,83	0/1:11,0:11:1.36:35,0,1	0/1:13,0:12:57.85:58,0,69	0/1:17,0:16:11.55:159,0,12	0/1:15,0:13:44.52:45,0,105	0/1:15,1:16:62.71:246,0,63	0/1:15,0:15:30.77:31,0,96	0/1:6,0:5:7.89:65,0,8	0/1:6,0:5:49.13:49,0,51	0/1:9,0:6:19.18:74,0,19	./.	0/1:7,0:7:40.89:74,0,41	0/1:26,0:25:99:181,0,113	1/1:13,0:11:29.27:284,29,0	1/1:9,0:8:7.94:70,8,0
chr10	47759816	.	TTATA	T	1511.81	PASS	AB=0.875;AC=17;AF=0.447;AN=38;BaseQRankSum=-1.311;DP=171;FS=5.656;HRun=0;HaplotypeScore=33.0583;InbreedingCoeff=0.5164;MQ=71.65;MQ0=1;MQRankSum=-0.421;QD=16.99;ReadPosRankSum=2.233;VQSLOD=2.3167;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:6:6.02:0,6,126	./.	./.	0/0:15,0:5:3.01:0,3,57	1/1:6,3:9:6.02:98,6,0	0/1:6,1:4:18.43:41,0,18	0/0:2,0:3:2.74:0,3,12	0/0:10,0:9:9.03:0,9,168	./.	1/1:6,4:10:12.04:196,12,0	1/1:2,1:3:3.01:49,3,0	./.	0/0:1,0:1:3.01:0,3,40	./.	0/0:2,0:3:3.01:0,3,53	./.	1/1:8,9:18:30.55:447,31,0	1/1:7,5:13:21.87:314,22,0	0/0:4,0:4:6.02:0,6,134	0/0:2,0:2:3.01:0,3,73	0/0:2,0:2:3.01:0,3,73	./.	./.	./.	1/1:9,1:10:2.51:37,3,0	1/1:6,2:9:9.02:126,9,0	0/0:6,0:8:17.84:0,18,356	1/1:2,8:10:21.07:344,21,0
chr10	47759847	.	ATGTG	A	607.32	PASS	AB=0.843;AC=19;AF=0.500;AN=38;BaseQRankSum=-1.902;DP=253;FS=1.447;HRun=0;HaplotypeScore=46.1313;InbreedingCoeff=0.2499;MQ=43.94;MQ0=33;MQRankSum=1.261;QD=4.64;ReadPosRankSum=-0.661;VQSLOD=1.1154;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	1/1:2,0:2:3:27,3,0	./.	./.	./.	0/1:14,2:10:0.23:37,0,0	1/1:6,2:7:3.48:47,3,0	0/1:10,0:9:0:0,0,0	./.	0/1:11,1:11:33.54:38,0,34	1/1:4,3:7:6.02:93,6,0	0/0:1,0:1:0:0,0,0	0/1:2,0:5:0:0,0,0	./.	0/0:3,0:3:3:0,3,25	./.	1/1:16,4:20:12.04:178,12,0	0/1:14,0:13:30.49:49,0,30	0/0:12,0:6:3.01:0,3,67	0/0:6,0:4:2.57:0,3,59	0/0:15,0:10:0.47:0,0,1	0/0:2,0:3:0:0,0,0	./.	./.	1/1:3,5:8:6.02:89,6,0	1/1:12,2:11:7.35:115,7,0	0/0:8,0:7:7.56:0,8,98	1/1:11,0:10:3.01:44,3,0
chr10	47761893	.	TACACACAC	T	935.14	PASS	AB=0.912;AC=16;AF=0.400;AN=40;BaseQRankSum=-0.021;DP=428;FS=2.897;HRun=0;HaplotypeScore=95.3388;InbreedingCoeff=0.5497;MQ=51.29;MQ0=31;MQRankSum=1.475;QD=6.54;ReadPosRankSum=2.367;VQSLOD=1.7105;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	1/1:3,0:5:2.51:54,3,0	./.	./.	./.	./.	./.	1/1:17,0:20:2.84:9,3,0	0/0:7,0:7:3.01:0,3,72	1/1:11,4:15:12.47:195,12,0	0/0:9,2:9:0:0,0,0	0/0:10,0:10:15.92:0,16,332	0/0:12,0:12:21:0,21,512	0/0:7,0:7:4.37:0,4,43	0/1:11,0:11:0.28:0,0,0	1/1:9,0:12:2.76:17,3,0	1/1:16,2:15:9:168,9,0	1/1:14,0:13:6.02:133,6,0	0/0:15,0:14:9.50:0,9,116	0/0:9,0:8:3.01:0,3,51	0/1:27,0:26:15.21:15,0,138	0/0:16,0:16:9.03:0,9,286	0/0:14,0:14:15.05:0,15,434	0/0:17,0:15:12.04:0,12,330	./.	1/1:7,9:16:24.06:482,24,0	0/0:14,0:14:11.83:0,12,153	./.
chr10	47761937	.	CAGAGAGAG	C	483.88	PASS	AB=0.949;AC=13;AF=0.271;AN=48;BaseQRankSum=0.319;DP=432;FS=21.105;HRun=0;HaplotypeScore=95.2596;InbreedingCoeff=0.2277;MQ=38.24;MQ0=41;MQRankSum=3.142;QD=3.10;ReadPosRankSum=0.714;VQSLOD=0.0596;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:16,10:20:0.89:0,1,2	1/1:5,0:8:2.25:66,2,0	./.	./.	0/1:16,0:14:0.05:0,0,0	./.	0/0:11,0:14:0.47:0,0,1	0/0:14,0:12:3.01:0,3,34	1/1:11,0:10:0.34:1,0,0	0/0:20,0:16:14.29:0,14,220	0/0:11,0:9:3.01:0,3,57	0/0:17,0:16:3.01:0,3,72	0/0:15,0:14:12.04:0,12,284	0/0:10,0:9:2.13:0,2,5	0/0:15,0:12:0:0,0,0	0/1:14,1:13:28:28,0,97	0/0:20,0:17:8.93:0,9,78	0/1:18,0:15:47.80:48,0,260	0/1:13,0:16:34.82:35,0,139	0/0:11,0:8:0:0,0,0	1/1:37,0:33:11.91:170,12,0	./.	0/0:18,0:18:3.01:0,3,91	0/0:25,0:22:9.03:0,9,222	0/0:8,0:7:1.55:0,2,4	0/1:24,0:21:6.69:125,0,7	0/0:19,0:19:26.68:0,27,314	1/1:9,0:8:7.04:133,7,0
chr10	47764479	.	A	AAAAGAAAG	2125.06	PASS	AB=0.997;AC=27;AF=0.519;AN=52;BaseQRankSum=4.699;DP=570;FS=2.062;HRun=0;HaplotypeScore=174.1007;InbreedingCoeff=0.0684;MQ=68.18;MQ0=5;MQRankSum=-1.589;QD=5.41;ReadPosRankSum=-6.053;VQSLOD=0.1139;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:32,0:32:11.63:12,0,278	1/1:7,0:7:9.03:282,9,0	./.	./.	0/1:22,0:22:7.45:7,0,135	1/1:27,0:26:42.13:821,42,0	1/1:11,0:11:6.02:100,6,0	1/1:29,0:28:0.47:1,0,0	0/1:25,0:25:44.18:49,0,44	0/0:11,0:11:9.03:0,9,175	0/1:24,0:25:65.80:66,0,306	0/1:18,0:18:25.50:79,0,25	0/1:19,0:19:55.91:69,0,56	0/0:19,0:19:6.23:0,6,144	1/1:12,9:22:6.02:219,6,0	0/0:31,0:31:31.56:0,32,405	1/1:16,0:16:17.42:332,17,0	1/1:20,0:20:12.46:90,12,0	0/0:17,0:17:11.96:0,12,207	0/0:20,0:20:24.08:0,24,535	0/0:20,0:20:12.04:0,12,172	0/1:13,0:13:7.62:8,0,19	0/1:20,0:20:36.89:37,0,58	0/1:29,0:29:38.11:64,0,38	0/1:19,0:19:30.25:30,0,39	0/1:27,0:27:12.73:13,0,41	0/0:20,0:20:36.12:0,36,821	1/1:12,0:12:6.08:18,6,0
chr10	47764515	.	GAAA	G	241.57	PASS	AB=0.743;AC=1;AF=0.019;AN=54;BaseQRankSum=4.948;DP=539;FS=5.307;HRun=3;HaplotypeScore=133.4057;InbreedingCoeff=0.2035;MQ=54.45;MQ0=9;MQRankSum=-4.042;QD=9.29;ReadPosRankSum=1.302;VQSLOD=0.3088;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:93.35:0,93,1193	0/0:11,0:11:29.99:0,30,513	0/0:9,0:3:1.25:0,1,3	./.	0/0:22,0:22:66.23:0,66,1330	0/0:24,0:23:69.22:0,69,1354	0/0:18,0:17:51.17:0,51,750	0/0:37,0:28:73.31:0,73,872	0/0:28,0:28:84.08:0,84,1307	0/0:22,0:21:63.19:0,63,924	0/0:21,0:21:62.24:0,62,1210	0/0:18,0:18:54.16:0,54,855	0/0:16,0:16:47.56:0,48,656	0/0:13,0:13:39.13:0,39,713	0/0:18,0:18:30.09:0,30,517	0/1:17,9:26:99:316,0,308	0/0:18,0:18:54.10:0,54,936	0/0:14,0:14:42.14:0,42,765	0/0:12,0:10:29.66:0,30,414	0/0:21,0:21:62.56:0,63,933	0/0:13,0:13:32.81:0,33,452	0/0:14,0:14:38.86:0,39,554	0/0:12,0:12:35.64:0,36,538	0/0:21,0:21:32.74:0,33,776	0/0:25,0:25:39.12:0,39,760	0/0:30,0:29:86.31:0,86,1620	0/0:24,0:24:71.94:0,72,1268	0/0:7,0:7:9.03:0,9,216
chr10	47764519	.	GAAAGA	G	212.46	PASS	AB=0.750;AC=1;AF=0.019;AN=54;BaseQRankSum=5.223;DP=539;FS=1.238;HRun=0;HaplotypeScore=146.4932;InbreedingCoeff=-0.0250;MQ=52.97;MQ0=9;MQRankSum=-4.238;QD=7.87;ReadPosRankSum=2.716;VQSLOD=2.1840;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:80.94:0,81,1234	0/0:11,0:11:28.34:0,28,583	0/0:12,0:2:6.02:0,6,81	./.	0/0:24,0:24:72.24:0,72,1463	0/0:24,0:23:66.22:0,66,1501	0/0:19,0:18:54.18:0,54,874	0/0:35,0:26:55.22:0,55,750	0/0:25,0:25:75.17:0,75,1341	0/0:22,0:21:63.21:0,63,1040	0/0:21,0:21:62.24:0,62,1317	0/0:19,0:19:54.17:0,54,919	0/0:16,0:16:44.97:0,45,639	0/0:13,0:13:39.13:0,39,827	0/0:17,0:17:27.09:0,27,576	0/1:18,9:27:99:287,0,292	0/0:18,0:18:54.18:0,54,1105	0/0:14,0:14:42.14:0,42,895	0/0:11,0:9:26.92:0,27,457	0/0:20,0:20:56.92:0,57,980	0/0:14,0:14:33.02:0,33,562	0/0:15,0:15:42.03:0,42,641	0/0:13,0:13:38.94:0,39,639	0/0:22,0:22:54.50:0,55,913	0/0:25,0:25:30.10:0,30,828	0/0:30,0:29:84.27:0,84,1698	0/0:23,0:23:69.11:0,69,1444	0/0:7,0:7:9.03:0,9,278
chr10	47764530	.	A	AG	469.54	PASS	AB=0.845;AC=7;AF=0.125;AN=56;BaseQRankSum=2.752;DP=555;FS=3.646;HRun=1;HaplotypeScore=119.8352;InbreedingCoeff=-0.1502;MQ=52.01;MQ0=16;MQRankSum=1.831;QD=3.33;ReadPosRankSum=0.783;VQSLOD=0.2513;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:33:2.36:2,0,280	0/0:11,0:11:27.20:0,27,262	0/0:21,0:7:20.91:0,21,197	0/0:19,1:4:5.20:0,5,110	0/0:26,0:26:76.56:0,77,556	0/0:23,0:22:63.09:0,63,715	0/0:23,0:22:66.19:0,66,822	0/0:33,0:26:56.40:0,56,396	0/1:17,8:25:99:159,0,154	0/0:23,0:22:55.39:0,55,233	0/0:21,0:21:61.26:0,61,553	0/1:16,4:20:79.64:80,0,116	0/1:10,2:12:41.48:41,0,68	0/0:15,0:15:35.97:0,36,237	0/0:18,0:18:28.63:0,29,339	0/0:22,1:23:32.58:0,33,270	0/0:19,0:18:50.55:0,51,320	0/0:12,0:12:34.07:0,34,195	0/0:12,0:9:20.94:0,21,87	0/0:19,0:19:48.85:0,49,244	0/0:14,0:14:3.45:0,3,109	0/1:11,3:14:49.16:49,0,81	0/1:11,3:14:38.86:118,0,39	0/1:18,5:23:43.87:144,0,44	0/0:22,0:22:23.83:0,24,184	0/0:26,0:25:71.28:0,71,466	0/0:25,0:24:41.66:0,42,256	0/0:7,0:7:8.90:0,9,59
chr10	47764532	.	A	AAAGG	9590.85	PASS	AB=0.995;AC=42;AF=0.750;AN=56;BaseQRankSum=0.486;DP=564;FS=7.539;HRun=0;HaplotypeScore=120.6130;InbreedingCoeff=0.2449;MQ=51.94;MQ0=16;MQRankSum=2.737;QD=19.38;ReadPosRankSum=2.490;VQSLOD=4.1371;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:33,0:33:21.25:380,21,0	0/1:11,0:11:45.40:45,0,93	0/0:25,0:8:23.80:0,24,186	0/0:20,0:4:11.99:0,12,104	1/1:5,22:27:65.28:752,65,0	0/1:23,0:22:99:109,0,156	0/0:24,0:23:59.79:0,60,494	1/1:30,0:24:34.03:247,34,0	1/1:17,0:25:51.07:933,51,0	1/1:23,0:22:22.35:465,22,0	1/1:8,13:21:38.65:488,39,0	1/1:17,0:21:53.96:682,54,0	1/1:11,0:13:30.02:399,30,0	1/1:14,0:14:30:310,30,0	0/1:17,0:17:29.23:29,0,153	0/1:21,0:22:2.18:260,0,2	1/1:19,0:18:35.73:330,36,0	1/1:8,4:12:33.04:515,33,0	0/1:13,0:10:19.53:87,0,20	0/1:20,0:20:84:175,0,84	0/1:15,0:15:23.98:80,0,24	1/1:11,0:14:35.94:443,36,0	1/1:12,0:15:30.05:469,30,0	1/1:18,0:23:38.76:587,39,0	1/1:3,19:22:21.07:522,21,0	1/1:5,21:28:68.96:874,69,0	0/1:25,0:24:99:185,0,166	1/1:0,7:8:9.03:224,9,0
chr10	47764548	.	GGGA	G	278	PASS	AB=0.942;AC=7;AF=0.125;AN=56;BaseQRankSum=4.067;DP=551;FS=0.713;HRun=0;HaplotypeScore=135.6548;InbreedingCoeff=-0.1464;MQ=58.42;MQ0=18;MQRankSum=-3.509;QD=2.21;ReadPosRankSum=-6.534;VQSLOD=0.3237;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:24:48.24:0,48,1342	0/1:5,4:9:99:100,0,345	0/0:39,0:13:36.12:0,36,877	0/1:39,0:15:5.33:5,0,598	0/0:25,0:25:49.79:0,50,1339	0/1:15,2:17:99:134,0,976	0/0:24,0:23:69.18:0,69,1607	0/0:28,0:25:60.09:0,60,1240	0/0:23,0:23:19.85:0,20,1085	0/0:24,0:23:69.24:0,69,1641	0/0:15,0:15:2.95:0,3,634	0/0:22,0:22:61.05:0,61,1324	0/0:16,0:16:45.01:0,45,957	0/0:12,1:13:31.92:0,32,742	0/1:13,0:13:11.84:12,0,680	0/0:21,0:21:63.10:0,63,1289	0/1:12,0:12:36.53:37,0,555	0/0:12,0:12:26.23:0,26,624	0/0:13,0:10:24:0,24,587	0/0:17,0:17:51.17:0,51,1184	0/0:14,0:14:17.10:0,17,671	0/0:13,0:13:32.46:0,32,714	0/1:13,0:13:31.95:32,0,552	0/1:20,0:19:83.88:84,0,438	0/0:21,0:21:22.23:0,22,262	0/0:27,0:26:77.71:0,78,1661	0/0:28,0:27:50.55:0,51,1530	0/0:5,0:5:12.03:0,12,185
chr10	47764804	.	TA	T	679.30	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=6.995;DP=550;FS=2.351;HRun=13;HaplotypeScore=54.5830;InbreedingCoeff=0.6989;MQ=59.88;MQ0=15;MQRankSum=-1.568;QD=5.19;ReadPosRankSum=1.627;VQSLOD=1.7289;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,33:35:65:467,65,0	0/0:16,0:15:30.05:0,30,291	0/0:42,0:7:3.33:0,3,20	0/1:39,0:10:8.83:9,0,73	0/0:16,0:18:41.74:0,42,378	0/0:13,0:13:35.21:0,35,311	0/0:14,0:14:30:0,30,281	1/1:18,0:36:9.80:104,10,0	0/0:6,0:6:12.02:0,12,117	0/0:23,1:22:35.09:0,35,477	0/0:17,2:19:10.28:0,10,407	0/0:12,0:12:3.62:0,4,179	0/0:13,0:13:29.94:0,30,277	0/0:10,0:10:24.03:0,24,227	0/0:11,0:11:24.03:0,24,228	1/1:4,13:17:32.77:241,33,0	0/0:33,1:33:44.57:0,45,560	0/0:27,2:29:30.89:0,31,587	0/0:28,1:27:37.95:0,38,514	0/0:25,0:26:65.83:0,66,589	0/0:11,0:11:21.03:0,21,204	0/0:6,0:5:9.01:0,9,88	0/0:8,0:7:8.39:0,8,137	0/0:6,0:6:15.02:0,15,146	0/0:19,0:20:32.32:0,32,330	0/0:15,0:15:41.99:0,42,388	0/0:22,0:23:41.71:0,42,367	0/0:11,0:11:27.03:0,27,257
chr10	47770529	.	AT	A	1355.37	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=10.413;DP=736;FS=5.648;HRun=9;HaplotypeScore=75.8393;InbreedingCoeff=0.9105;MQ=73.92;MQ0=0;MQRankSum=0.323;QD=20.54;ReadPosRankSum=-5.271;VQSLOD=1.8223;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:87.25:0,87,994	0/0:13,0:13:36.11:0,36,416	0/0:27,0:25:27.95:0,28,382	0/0:14,0:11:2.54:0,3,126	0/0:33,0:33:87.26:0,87,1003	0/0:31,0:31:81.24:0,81,935	0/0:17,0:17:51.15:0,51,589	1/1:5,39:44:99:1010,111,0	0/0:29,0:29:84.06:0,84,930	0/0:26,0:26:60.18:0,60,693	0/0:31,0:32:96.09:0,96,1062	0/0:22,0:22:66.16:0,66,747	0/0:24,0:24:69.20:0,69,796	0/0:26,0:26:63.15:0,63,699	0/0:22,0:22:60.18:0,60,692	1/1:1,21:22:51.03:467,51,0	0/0:20,0:20:57.13:0,57,643	0/0:22,0:22:51.15:0,51,589	0/0:19,0:20:57:0,57,628	0/0:31,0:32:93.11:0,93,1053	0/0:18,0:18:48.14:0,48,553	0/0:29,0:29:81.23:0,81,927	0/0:36,0:36:99:0,99,1137	0/0:22,1:23:35.72:0,36,665	0/0:32,0:32:87.24:0,87,986	0/0:36,0:36:99:0,99,1143	0/0:39,0:39:99:0,111,1270	0/0:12,0:12:36.10:0,36,407
chr10	47772503	.	T	TC	3651.63	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-8.044;DP=644;FS=0.795;HRun=9;HaplotypeScore=79.6192;InbreedingCoeff=0.9450;MQ=65.92;MQ0=2;MQRankSum=-3.017;QD=17.56;ReadPosRankSum=-0.198;VQSLOD=3.6450;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,127,1119	1/1:5,0:5:5.95:41,6,0	0/0:24,0:19:20.15:0,20,272	0/0:18,0:16:43.75:0,44,348	0/0:21,0:21:56.97:0,57,491	0/0:14,0:15:1.54:0,2,4	1/1:16,0:22:12.64:61,13,0	0/0:22,0:21:38.96:0,39,334	1/1:3,19:22:48.13:531,48,0	0/0:32,0:32:95.94:0,96,821	0/0:16,0:16:32.99:0,33,286	1/1:2,22:24:54.15:597,54,0	1/1:4,19:23:22.08:472,22,0	0/0:23,0:23:65.96:0,66,569	1/1:11,0:19:11.31:57,11,0	1/1:8,1:21:14.34:72,14,0	0/0:30,0:30:78.41:0,78,666	0/0:24,0:24:62.94:0,63,539	0/0:26,1:27:35.74:0,36,532	0/0:23,0:23:53.94:0,54,459	0/0:23,0:23:53.97:0,54,469	1/1:5,27:32:69.19:763,69,0	1/1:5,16:21:28.06:525,28,0	1/1:3,16:19:49.02:533,49,0	0/0:16,0:16:44.99:0,45,390	0/0:31,0:31:77.93:0,78,669	0/0:27,0:27:68.45:0,68,578	0/0:8,0:8:23.98:0,24,204
chr10	47773195	.	A	AT	2389.64	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=1.303;DP=422;FS=33.654;HRun=7;HaplotypeScore=43.7513;InbreedingCoeff=0.8786;MQ=61.86;MQ0=1;MQRankSum=1.065;QD=19.43;ReadPosRankSum=0.447;VQSLOD=1.5605;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:46:99:0,122,1149	1/1:2,11:13:24.07:290,24,0	0/0:5,0:1:2.99:0,3,24	0/1:9,0:6:12.47:12,0,23	0/0:24,0:24:63.08:0,63,602	1/1:1,19:20:57.17:688,57,0	1/1:0,9:9:24.07:290,24,0	0/0:28,0:28:72.08:0,72,685	1/1:7,0:7:17.62:110,18,0	0/0:13,0:13:39.06:0,39,377	0/0:10,0:10:27.04:0,27,261	1/1:14,0:15:34.34:235,34,0	1/1:15,0:15:35.24:221,35,0	0/0:14,0:14:42.06:0,42,400	1/1:1,8:9:21.06:250,21,0	1/1:2,11:13:24.07:290,24,0	0/0:19,0:19:51.08:0,51,492	0/0:27,0:27:78.13:0,78,753	0/0:20,0:19:48.03:0,48,455	0/0:19,0:19:54.09:0,54,521	0/0:8,0:8:15.02:0,15,145	1/1:2,0:2:5.87:41,6,0	1/1:6,0:6:11.84:84,12,0	1/1:5,0:5:14.80:99,15,0	0/0:15,0:15:45.06:0,45,429	0/0:16,0:16:42.07:0,42,406	0/0:16,0:16:39.06:0,39,377	0/0:19,0:19:45.07:0,45,435
chr10	47773198	.	T	TA	1999.60	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=3.333;DP=423;FS=36.940;HRun=0;HaplotypeScore=45.3124;InbreedingCoeff=0.7027;MQ=61.97;MQ0=1;MQRankSum=0.091;QD=16.53;ReadPosRankSum=2.310;VQSLOD=2.4135;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,133,1761	0/1:13,0:13:24.26:68,0,24	0/0:5,0:1:3.01:0,3,41	0/0:7,0:5:10.55:0,11,80	0/0:23,0:23:69.04:0,69,897	1/1:20,0:20:26:156,26,0	1/1:10,0:10:19.34:69,19,0	0/0:29,0:29:81.25:0,81,1089	1/1:0,9:9:18.06:260,18,0	0/0:13,0:13:39.13:0,39,545	0/0:11,0:11:30.09:0,30,405	1/1:2,15:17:37.23:562,37,0	1/1:0,15:15:35.95:520,36,0	0/0:14,0:14:42.14:0,42,583	0/1:11,0:11:27.95:47,0,28	0/1:13,0:13:30.60:41,0,31	0/0:20,0:20:60.15:0,60,785	0/0:26,0:26:78.26:0,78,1090	0/0:19,0:18:54.16:0,54,713	0/0:18,0:18:54.18:0,54,754	0/0:6,0:6:18.05:0,18,236	1/1:0,2:2:6.02:85,6,0	1/1:0,6:6:12.04:174,12,0	1/1:0,5:5:15.05:220,15,0	0/0:15,0:15:45.15:0,45,629	0/0:17,0:17:45.14:0,45,615	0/0:15,0:15:45.13:0,45,597	0/0:16,0:16:48.15:0,48,654
chr10	47773710	.	ACG	A	187.96	PASS	AB=0.868;AC=7;AF=0.130;AN=54;BaseQRankSum=2.392;DP=678;FS=0.000;HRun=0;HaplotypeScore=131.7944;InbreedingCoeff=-0.1487;MQ=52.01;MQ0=13;MQRankSum=-1.108;QD=1.33;ReadPosRankSum=-1.163;VQSLOD=1.9253;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,1:36:2.29:0,2,485	0/0:5,0:5:4.52:0,5,144	./.	0/1:10,1:5:6.70:7,0,17	0/1:9,5:13:28.30:152,0,28	0/0:20,0:20:47.95:0,48,624	0/0:38,0:38:77.73:0,78,833	0/0:20,0:20:24.02:0,24,108	0/0:26,0:26:38.39:0,38,658	0/1:16,3:18:22.23:22,0,240	0/0:13,0:12:17.97:0,18,149	0/0:36,0:35:60.34:0,60,795	0/0:30,0:29:68.76:0,69,763	0/0:44,0:43:99:0,101,1310	0/0:26,0:24:15.86:0,16,519	0/0:20,0:20:25.56:0,26,588	0/1:44,0:41:23.88:24,0,240	0/0:35,2:34:23.15:0,23,555	0/1:24,0:24:1.89:2,0,333	0/0:10,0:10:27.07:0,27,315	0/0:61,0:59:2.27:0,2,1082	0/0:8,0:8:8.44:0,8,188	0/0:8,0:8:12.76:0,13,134	0/0:65,0:64:69.65:0,70,1766	0/0:16,0:14:23.97:0,24,254	0/1:22,1:19:1.86:2,0,319	0/0:14,0:14:35.91:0,36,471	0/1:2,4:5:21.97:92,0,22
chr10	47774999	.	CT	C	847.54	PASS	AB=0.883;AC=7;AF=0.125;AN=56;BaseQRankSum=-1.054;DP=636;FS=10.258;HRun=13;HaplotypeScore=91.1543;InbreedingCoeff=0.5443;MQ=72.38;MQ0=9;MQRankSum=1.068;QD=6.23;ReadPosRankSum=1.167;VQSLOD=1.7474;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,40:53:58.46:644,58,0	0/0:2,0:10:16.98:0,17,100	0/0:49,1:21:36.07:0,36,258	0/1:26,0:14:1.27:1,0,62	0/0:23,2:24:19.21:0,19,491	0/0:3,0:16:24.60:0,25,165	0/0:5,0:23:35.76:0,36,207	1/1:5,18:24:44.20:317,44,0	0/0:11,0:28:38.44:0,38,196	0/0:15,0:15:21.03:0,21,204	0/0:12,1:13:11.15:0,11,269	0/0:6,0:19:25.60:0,26,129	0/0:8,0:14:17:0,17,85	0/0:23,0:23:48.94:0,49,443	0/0:6,0:15:23.11:0,23,144	0/0:1,0:15:28.74:0,29,172	0/0:46,4:52:52.25:0,52,927	0/0:31,0:33:80.93:0,81,759	0/0:24,1:30:14.34:0,14,377	0/0:18,0:18:39.01:0,39,370	0/1:15,4:19:4.80:5,0,265	0/0:10,0:16:26.05:0,26,151	0/0:5,0:16:28.70:0,29,152	0/0:8,0:22:31.85:0,32,163	0/0:11,0:11:21.03:0,21,204	0/0:25,0:25:23.59:0,24,360	0/1:11,3:14:10.77:11,0,229	0/0:8,1:10:5.01:0,5,197
chr10	47776035	.	T	TGG	477.03	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.945;DP=528;FS=9.754;HRun=0;HaplotypeScore=90.4283;InbreedingCoeff=0.7840;MQ=65.30;MQ0=8;MQRankSum=-4.553;QD=23.85;ReadPosRankSum=0.494;VQSLOD=4.0705;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,16:20:4.06:555,4,0	0/0:7,0:7:18.02:0,18,223	0/0:25,0:10:11.22:0,11,164	0/0:21,0:11:26.75:0,27,284	0/0:16,0:16:48.15:0,48,712	0/0:21,0:21:47.25:0,47,597	0/0:27,0:25:50.96:0,51,669	0/0:37,0:37:99:0,108,1585	0/0:17,0:17:45.15:0,45,657	0/0:14,0:14:42.14:0,42,646	0/0:18,0:18:48.14:0,48,718	0/0:14,0:14:42.14:0,42,641	0/0:9,0:9:24.96:0,25,367	0/0:16,0:16:45.14:0,45,695	0/0:13,0:13:29.69:0,30,311	0/0:15,0:14:32.98:0,33,418	0/0:23,0:22:66.23:0,66,1064	0/0:26,0:26:75.26:0,75,1208	0/0:38,0:36:99:0,108,1617	0/0:25,0:25:72.25:0,72,1150	0/0:12,0:12:36.12:0,36,534	0/0:8,0:8:24.06:0,24,316	0/0:21,0:21:54.17:0,54,782	0/0:17,0:17:33.99:0,34,464	0/0:18,0:18:51.14:0,51,791	0/0:17,0:17:51.17:0,51,793	0/0:16,0:16:42.12:0,42,615	0/0:17,0:16:42.14:0,42,640
chr10	47776040	.	TTTC	T	2042.08	PASS	AB=0.949;AC=17;AF=0.304;AN=56;BaseQRankSum=7.219;DP=516;FS=5.083;HRun=0;HaplotypeScore=87.9231;InbreedingCoeff=0.3979;MQ=64.35;MQ0=10;MQRankSum=-2.493;QD=10.75;ReadPosRankSum=0.451;VQSLOD=2.9595;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:19:5.03:382,5,0	1/1:0,6:6:12.01:154,12,0	0/1:26,0:10:14.77:15,0,33	0/0:21,0:10:17.07:0,17,136	0/0:18,0:18:47.55:0,48,674	1/1:4,16:20:44.80:570,45,0	1/1:2,23:23:39.13:577,39,0	0/0:38,0:38:49.34:0,49,1168	0/0:14,0:14:17.85:0,18,170	0/0:12,0:12:33.08:0,33,582	0/0:16,0:16:35.41:0,35,547	0/1:15,0:15:6.44:6,0,182	0/1:7,0:7:21.06:21,0,83	0/0:17,0:17:48.10:0,48,739	1/1:2,11:13:21.50:281,21,0	0/1:7,9:15:10.22:169,0,10	0/0:23,0:21:63.22:0,63,1166	0/0:29,0:29:77.39:0,77,1224	0/0:34,0:32:91.52:0,92,1289	0/0:23,0:23:54.10:0,54,999	0/0:13,0:12:33:0,33,519	0/1:7,0:7:17.81:18,0,58	0/1:21,0:21:11.96:12,0,163	0/1:15,0:15:20.99:21,0,83	0/0:18,0:18:48.14:0,48,834	0/0:18,0:18:45.06:0,45,723	0/0:16,0:16:39.15:0,39,501	0/0:16,0:15:10.38:0,10,491
chr10	47776042	.	TC	T	2042.40	PASS	AB=0.922;AC=25;AF=0.446;AN=56;BaseQRankSum=12.291;DP=500;FS=0.391;HRun=1;HaplotypeScore=68.6247;InbreedingCoeff=0.7382;MQ=62.63;MQ0=10;MQRankSum=-2.626;QD=8.65;ReadPosRankSum=0.375;VQSLOD=0.8923;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,4:20:35.07:455,35,0	1/1:6,0:6:11.84:79,12,0	0/1:23,1:9:29.99:34,0,30	0/0:20,0:9:6.53:0,7,36	0/0:17,0:17:25.13:0,25,367	1/1:20,0:20:44.18:284,44,0	1/1:23,1:22:38.44:251,38,0	0/1:35,1:36:16.28:16,0,677	1/1:13,2:15:7.63:230,8,0	0/0:11,0:11:32.99:0,33,373	0/0:16,0:16:28.85:0,29,349	1/1:14,1:15:23.87:172,24,0	1/1:7,0:7:10.96:54,11,0	0/0:17,0:17:43.83:0,44,463	1/1:11,2:13:23.64:171,24,0	0/1:12,3:14:23.45:97,0,23	0/0:24,0:22:66.10:0,66,712	0/0:28,0:27:77.07:0,77,820	0/0:34,0:32:31.84:0,32,812	0/0:21,0:21:32.18:0,32,594	0/0:12,0:11:30.84:0,31,323	1/1:7,0:7:11.29:49,11,0	1/1:18,1:19:29.80:191,30,0	1/1:13,2:15:22.68:177,23,0	0/0:18,0:18:47.41:0,47,512	0/0:16,0:16:44.62:0,45,463	0/0:16,0:16:35.40:0,35,310	0/0:14,0:13:9.87:0,10,279
chr10	47776146	.	T	TTTTTTG	3606.60	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-0.252;DP=460;FS=0.588;HRun=0;HaplotypeScore=113.7297;InbreedingCoeff=0.9294;MQ=65.62;MQ0=3;MQRankSum=-6.655;QD=64.40;ReadPosRankSum=-0.593;VQSLOD=3.5318;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:42.12:0,42,807	1/1:3,3:6:12.04:336,12,0	0/0:25,0:17:18.06:0,18,304	0/0:23,0:13:0.94:0,1,184	0/0:19,0:19:39.13:0,39,805	1/1:4,5:9:21.07:653,21,0	1/1:14,3:17:36.12:991,36,0	0/0:31,0:31:45.15:0,45,885	0/0:11,0:11:29.93:0,30,244	0/0:16,0:16:33.11:0,33,682	0/0:17,0:17:42.14:0,42,863	0/0:10,0:10:14.97:0,15,122	0/0:12,0:12:32.91:0,33,265	0/0:8,0:8:18.06:0,18,370	1/1:6,4:10:21.05:497,21,0	1/1:9,5:14:42.13:1131,42,0	0/0:19,0:19:30.09:0,30,582	0/0:19,0:19:25.01:0,25,783	0/0:26,0:26:36.11:0,36,679	0/0:19,0:19:45.12:0,45,793	0/0:19,0:19:48.16:0,48,992	0/0:13,0:13:29.90:0,30,244	0/0:18,0:18:32.89:0,33,268	0/0:18,0:18:50.54:0,51,411	0/0:8,0:7:21.07:0,21,411	0/0:16,0:16:36.10:0,36,682	0/0:22,0:22:54.18:0,54,1055	0/0:14,0:14:30.10:0,30,620
chr10	47776164	.	G	GT	3027.19	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=-4.346;DP=527;FS=3.690;HRun=6;HaplotypeScore=73.2718;InbreedingCoeff=0.7328;MQ=66.17;MQ0=9;MQRankSum=-0.004;QD=22.42;ReadPosRankSum=4.167;VQSLOD=3.0094;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:60.12:0,60,611	0/1:5,0:5:9.51:10,0,47	0/0:36,0:17:32.26:0,32,302	0/0:26,0:14:7.69:0,8,174	0/0:23,0:23:65.80:0,66,645	0/1:13,0:13:15.37:15,0,90	0/0:16,0:19:14.71:0,15,249	0/0:27,0:27:66.14:0,66,671	1/1:0,18:18:45.14:566,45,0	0/0:17,0:17:48.11:0,48,489	0/0:18,0:17:42.09:0,42,428	1/1:0,12:12:24.08:302,24,0	1/1:1,10:11:33.11:412,33,0	0/0:7,0:7:18.04:0,18,183	0/1:11,0:12:0.13:0,0,172	0/0:16,0:20:2.79:0,3,248	0/0:18,0:18:48.10:0,48,489	0/0:19,0:19:36.94:0,37,421	0/0:28,0:28:66.13:0,66,668	0/0:24,0:24:66.13:0,66,666	0/0:22,0:19:54.12:0,54,551	1/1:2,15:16:42.13:528,42,0	1/1:0,24:24:57.18:702,57,0	1/1:1,22:23:54.17:679,54,0	0/0:12,0:11:33.03:0,33,320	0/0:18,0:18:48.11:0,48,489	0/0:22,0:22:60.13:0,60,611	0/0:10,0:10:30.07:0,30,306
chr10	47776179	.	GT	G	1390.58	PASS	AB=0.926;AC=13;AF=0.232;AN=56;BaseQRankSum=4.245;DP=541;FS=1.036;HRun=11;HaplotypeScore=80.1900;InbreedingCoeff=0.8765;MQ=69.05;MQ0=9;MQRankSum=-2.981;QD=11.31;ReadPosRankSum=0.850;VQSLOD=3.3765;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,23:26:57.39:467,57,0	1/1:0,7:7:14.97:123,15,0	0/0:32,0:15:23.98:0,24,211	0/1:23,2:13:12.52:13,0,46	0/0:23,2:26:19.38:0,19,562	1/1:5,9:14:23.90:193,24,0	1/1:5,13:17:6.91:263,7,0	0/0:9,0:20:31.43:0,31,182	0/0:17,0:18:39.05:0,39,397	0/0:16,0:18:47.81:0,48,468	0/0:18,1:18:20.32:0,20,378	0/0:13,0:13:27.03:0,27,275	0/0:12,0:12:33.06:0,33,338	0/0:10,0:10:27.04:0,27,276	1/1:2,9:11:26.91:222,27,0	1/1:7,15:22:35.81:295,36,0	0/0:21,0:21:57.14:0,57,608	0/0:16,0:19:53.83:0,54,528	0/0:18,1:21:26.08:0,26,419	0/0:23,0:25:68.84:0,69,700	0/0:23,0:20:54.14:0,54,575	0/0:23,1:23:66.16:0,66,702	0/0:22,1:23:14.89:0,15,347	0/0:25,0:25:54.14:0,54,576	0/0:12,0:13:32.95:0,33,334	0/0:19,0:19:39.08:0,39,398	0/0:23,1:24:48.06:0,48,470	0/0:11,0:12:26.89:0,27,248
chr10	47777180	.	CG	C	4279.41	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=4.430;DP=669;FS=7.073;HRun=1;HaplotypeScore=74.7546;InbreedingCoeff=0.9999;MQ=88.01;MQ0=0;MQRankSum=-2.883;QD=40.37;ReadPosRankSum=4.406;VQSLOD=5.3814;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,111,1748	1/1:0,10:10:30.10:419,30,0	0/0:20,0:20:60.19:0,60,905	0/0:28,0:28:78.18:0,78,1138	0/0:27,0:27:81.24:0,81,1229	1/1:0,20:20:60.20:839,60,0	1/1:0,23:23:66.22:923,66,0	0/0:22,0:22:66.21:0,66,1013	0/0:21,0:21:63.21:0,63,1000	0/0:24,0:24:72.25:0,72,1148	0/0:20,0:20:54.15:0,54,783	0/0:31,0:31:90.31:0,90,1438	0/0:15,0:15:45.14:0,45,685	0/0:22,0:22:66.21:0,66,1023	1/1:0,26:26:69.23:965,69,0	1/1:0,27:27:81.27:1133,81,0	0/0:29,0:29:87.26:0,87,1342	0/0:23,0:23:63.20:0,63,983	0/0:16,0:16:48.10:0,48,672	0/0:21,0:21:63.15:0,63,950	0/0:40,0:40:99:0,120,1892	0/0:28,0:28:84.27:0,84,1309	0/0:28,0:28:84.29:0,84,1341	0/0:24,0:24:69.23:0,69,1085	0/0:26,0:26:75.22:0,75,1166	0/0:23,0:23:66.22:0,66,1033	0/0:24,0:24:72.21:0,72,1094	0/0:14,0:14:42.11:0,42,624
chr10	47777864	.	TATCTATCC	T	564.58	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.986;DP=396;FS=5.915;HRun=0;HaplotypeScore=95.5922;InbreedingCoeff=0.9231;MQ=62.69;MQ0=1;MQRankSum=-4.192;QD=26.88;ReadPosRankSum=-0.386;VQSLOD=2.8070;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:15,6:21:33.97:659,34,0	0/0:13,0:13:36.12:0,36,1466	0/0:18,0:12:25.32:0,25,743	0/0:15,0:10:24.06:0,24,651	0/0:12,0:12:30.10:0,30,1269	0/0:13,0:13:27.09:0,27,1006	0/0:14,0:14:27.08:0,27,935	0/0:35,0:35:69.21:0,69,2113	0/0:9,0:9:18.06:0,18,762	0/0:13,0:13:39.13:0,39,1528	0/0:11,0:11:21.06:0,21,786	0/0:9,0:9:15.05:0,15,550	0/0:8,0:8:21.06:0,21,771	0/0:5,0:5:15.05:0,15,566	0/0:7,0:7:18.06:0,18,760	0/0:10,0:10:21.06:0,21,783	0/0:19,0:19:45.14:0,45,1723	0/0:15,0:15:45.15:0,45,1859	0/0:15,0:15:36.12:0,36,1455	0/0:14,0:14:36.12:0,36,1501	0/0:6,0:6:15.05:0,15,584	0/0:16,0:16:39.13:0,39,1637	0/0:17,0:17:48.16:0,48,1704	0/0:16,0:16:39.12:0,39,1417	0/0:20,0:20:48.16:0,48,1925	0/0:19,0:19:45.15:0,45,1777	0/0:12,0:12:30.10:0,30,1256	0/0:13,0:13:36.12:0,36,1308
chr10	47777917	.	AT	A	602.60	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=4.716;DP=344;FS=2.576;HRun=9;HaplotypeScore=38.4662;InbreedingCoeff=0.9059;MQ=60.54;MQ0=0;MQRankSum=1.625;QD=16.74;ReadPosRankSum=1.832;VQSLOD=3.3182;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:45.08:0,45,495	1/1:2,7:9:21.01:192,21,0	0/0:12,0:9:18.05:0,18,208	0/0:9,0:5:9.48:0,9,90	0/0:15,0:15:45.13:0,45,519	1/1:1,5:6:12.01:110,12,0	1/1:2,5:7:15.01:137,15,0	0/0:21,0:21:39.12:0,39,450	0/0:7,0:7:21.06:0,21,242	0/0:22,0:22:57.16:0,57,650	0/0:11,0:11:27.08:0,27,312	0/0:3,0:3:6.02:0,6,69	0/0:10,0:10:27.08:0,27,310	0/0:4,0:4:12.02:0,12,128	1/1:0,8:8:21.01:192,21,0	1/1:0,6:6:15.01:140,15,0	0/0:17,0:17:42.07:0,42,460	0/0:23,0:23:66.18:0,66,750	0/0:9,0:9:24.02:0,24,253	0/0:15,0:15:36.07:0,36,401	0/0:8,0:8:15.04:0,15,173	0/0:15,0:15:36.11:0,36,415	0/0:16,0:16:45.13:0,45,519	0/0:6,0:6:15.03:0,15,163	0/0:11,0:11:30.03:0,30,320	0/0:28,0:28:81.22:0,81,919	0/0:13,1:14:5.63:0,6,318	0/0:16,0:16:48.10:0,48,530
chr10	47777951	.	A	AT	1117.02	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-7.252;DP=229;FS=2.386;HRun=8;HaplotypeScore=32.8108;InbreedingCoeff=0.5059;MQ=61.75;MQ0=0;MQRankSum=1.370;QD=27.24;ReadPosRankSum=-3.531;VQSLOD=2.4646;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,12:14:30.09:346,30,0	0/0:5,0:5:6:0,6,55	0/0:7,0:7:14.94:0,15,123	0/0:4,0:3:2.98:0,3,27	0/0:11,0:11:24.01:0,24,220	0/0:6,0:6:2.45:0,2,98	0/0:4,0:4:6:0,6,55	1/1:1,26:27:78.22:889,78,0	0/0:4,0:4:9:0,9,82	0/0:13,0:13:38.97:0,39,345	0/0:5,0:5:12.01:0,12,110	0/0:1,0:1:3:0,3,27	0/0:8,0:8:21.01:0,21,192	0/0:1,0:1:3:0,3,27	0/0:5,0:5:15.01:0,15,137	0/0:3,0:3:6:0,6,55	0/0:13,0:13:33:0,33,301	0/0:16,0:16:42.02:0,42,384	0/0:8,0:8:18.01:0,18,165	0/0:7,0:7:15:0,15,137	0/0:4,0:4:12.01:0,12,110	0/0:4,0:4:12.01:0,12,110	0/0:11,0:11:27.01:0,27,247	0/0:1,0:1:3:0,3,27	0/0:1,0:1:3:0,3,27	0/0:22,0:23:62.07:0,62,555	0/0:9,0:9:27.01:0,27,247	0/0:14,0:14:42.02:0,42,384
chr10	47777967	.	CATTT	C	249.81	PASS	AC=8;AF=0.200;AN=40;BaseQRankSum=2.069;DP=185;FS=0.000;HRun=0;HaplotypeScore=37.4185;InbreedingCoeff=0.5760;MQ=54.26;MQ0=2;MQRankSum=-1.242;QD=19.22;ReadPosRankSum=-1.949;VQSLOD=2.5802;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:3.01:0,3,74	1/1:0,2:2:6.02:99,6,0	0/0:8,0:7:11.25:0,11,199	./.	0/0:10,0:10:18.06:0,18,441	1/1:2,3:5:12.03:174,12,0	./.	0/0:27,0:27:42.13:0,42,879	./.	0/0:10,0:10:12.04:0,12,294	./.	./.	0/0:6,0:6:12.04:0,12,294	./.	1/1:3,1:4:3.01:50,3,0	1/1:2,0:2:3.01:47,3,0	0/0:12,0:12:24.08:0,24,481	0/0:13,0:13:24.08:0,24,587	0/0:7,0:6:9.03:0,9,221	0/0:5,0:5:6.02:0,6,147	./.	./.	0/0:4,0:4:3.01:0,3,74	0/0:1,0:1:3.01:0,3,63	0/0:1,0:1:3.01:0,3,73	0/0:17,0:17:33.11:0,33,735	0/0:7,0:7:6.02:0,6,147	0/0:14,0:14:21.07:0,21,515
chr10	47778321	.	AG	A	1777.05	PASS	AB=0.788;AC=46;AF=0.920;AN=50;BaseQRankSum=-2.771;DP=100;FS=0.000;HRun=3;HaplotypeScore=27.1401;InbreedingCoeff=-0.0255;MQ=55.63;MQ0=0;MQRankSum=-1.259;QD=18.13;ReadPosRankSum=-1.793;VQSLOD=2.2394;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:3,0:2:0.19:3,0,0	0/1:1,1:2:25.81:31,0,26	1/1:6,2:2:1.82:5,2,0	0/1:6,1:4:15.58:54,0,16	1/1:0,2:2:6.02:74,6,0	0/1:1,1:2:1.43:32,0,1	1/1:2,2:4:3.01:37,3,0	1/1:1,2:3:6.02:74,6,0	1/1:0,2:2:6.02:74,6,0	1/1:1,4:5:12.04:149,12,0	1/1:1,1:2:3.01:37,3,0	1/1:2,3:5:9.03:111,9,0	1/1:0,3:3:9.03:112,9,0	1/1:0,4:4:6.02:74,6,0	1/1:5,1:5:5.02:43,5,0	1/1:1,3:4:6.02:74,6,0	1/1:0,4:4:9.03:111,9,0	1/1:0,4:4:9.03:112,9,0	1/1:0,3:3:9.01:97,9,0	./.	1/1:0,3:3:9.03:111,9,0	1/1:0,5:5:12.04:148,12,0	1/1:0,3:3:5.89:74,6,0	1/1:1,0:1:2.04:6,2,0	1/1:0,4:4:9.03:112,9,0	1/1:2,4:4:11.07:117,11,0	./.	./.
chr10	47778369	.	A	AGAG	504.54	PASS	AB=0.929;AC=12;AF=0.222;AN=54;BaseQRankSum=1.958;DP=300;FS=4.606;HRun=0;HaplotypeScore=51.8018;InbreedingCoeff=0.1924;MQ=33.68;MQ0=58;MQRankSum=-3.791;QD=5.05;ReadPosRankSum=-1.410;VQSLOD=0.9846;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:5:6.01:0,6,65	./.	0/0:13,0:2:4.26:0,4,49	0/0:28,0:6:9.50:0,10,136	0/0:11,0:10:16.68:0,17,236	0/0:9,0:3:2.16:0,2,37	0/0:21,0:10:2.16:0,2,35	1/1:8,2:4:9.02:154,9,0	0/1:12,1:8:25.73:81,0,26	0/1:15,0:11:3.75:4,0,229	0/0:9,0:7:4.49:0,4,64	0/1:8,3:8:17.21:169,0,17	0/1:10,2:6:13.87:147,0,14	0/0:7,0:5:6.02:0,6,93	1/1:8,0:4:1.25:3,1,0	0/1:6,0:4:0.06:0,0,0	0/0:8,0:4:9.03:0,9,123	0/0:13,0:11:30.08:0,30,424	0/0:10,0:6:9.03:0,9,131	0/0:4,0:3:5.91:0,6,93	0/0:12,0:7:17.85:0,18,235	1/1:11,1:7:5.95:56,6,0	0/1:10,0:6:4.31:22,0,4	0/0:10,0:3:3.01:0,3,32	0/0:6,0:5:15.01:0,15,198	0/0:16,0:14:41.97:0,42,590	0/0:1,0:1:3.01:0,3,46	0/0:11,0:9:17.36:0,17,261
chr10	47779981	.	TTTGGTTGC	T	1921.38	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=8.190;DP=543;FS=1.571;HRun=0;HaplotypeScore=129.0884;InbreedingCoeff=0.9932;MQ=58.65;MQ0=6;MQRankSum=-5.938;QD=66.25;ReadPosRankSum=-3.226;VQSLOD=3.2989;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,102,4464	0/0:9,0:9:27.09:0,27,1223	0/0:23,0:9:27.09:0,27,870	0/0:19,0:9:24.06:0,24,962	0/0:21,0:21:63.19:0,63,2607	0/0:16,0:16:48.15:0,48,1891	0/0:23,0:23:66.20:0,66,2754	1/1:1,28:29:84.12:2016,84,0	0/0:18,0:18:54.19:0,54,2363	0/0:23,0:23:66.18:0,66,2649	0/0:20,0:20:60.20:0,60,2576	0/0:11,0:11:33.11:0,33,1367	0/0:8,0:8:24.08:0,24,1087	0/0:12,0:12:36.12:0,36,1594	0/0:12,0:12:36.12:0,36,1629	0/0:14,0:14:42.14:0,42,1903	0/0:23,0:23:66.23:0,66,2986	0/0:23,0:23:68.69:0,69,2773	0/0:22,0:22:63.20:0,63,2524	0/0:20,0:20:60.18:0,60,2463	0/0:25,0:25:75.26:0,75,3398	0/0:13,0:13:36.11:0,36,1519	0/0:18,0:18:51.18:0,51,2199	0/0:19,0:19:57.20:0,57,2557	0/0:26,0:26:75.26:0,75,3131	0/0:28,0:27:81.27:0,81,3448	0/0:21,0:21:63.21:0,63,2655	0/0:12,0:12:36.12:0,36,1629
chr10	47780199	.	C	CACAG	8385.22	PASS	AB=0.635;AC=41;AF=0.732;AN=56;BaseQRankSum=-0.155;DP=662;FS=10.464;HRun=0;HaplotypeScore=203.8351;InbreedingCoeff=0.7668;MQ=56.74;MQ0=3;MQRankSum=-4.343;QD=16.94;ReadPosRankSum=-0.342;VQSLOD=3.4219;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:30:17.99:185,18,0	1/1:9,0:10:15.05:247,15,0	0/0:23,0:15:12.04:0,12,181	0/0:10,0:8:18.06:0,18,275	1/1:6,10:17:24.08:566,24,0	1/1:23,0:23:6.02:100,6,0	1/1:52,0:52:30.50:344,31,0	1/1:20,0:18:36.46:474,36,0	1/1:30,0:30:17.97:219,18,0	1/1:14,14:28:3.27:1043,3,0	1/1:5,11:16:18.06:426,18,0	1/1:27,0:27:15.05:231,15,0	1/1:20,0:20:17.95:239,18,0	0/0:34,0:34:66.22:0,66,1049	1/1:32,0:32:6.02:109,6,0	1/1:26,1:29:18.05:292,18,0	0/1:14,18:33:56.58:752,0,57	1/1:6,17:25:48.16:1143,48,0	0/0:22,0:21:30.07:0,30,456	0/0:14,0:14:36.12:0,36,568	0/0:42,0:43:87.06:0,87,1276	1/1:14,0:13:2.97:67,3,0	1/1:13,0:13:6.01:80,6,0	1/1:24,0:25:18.05:250,18,0	1/1:6,8:15:15.05:360,15,0	1/1:11,14:25:48.16:1125,48,0	0/0:21,0:21:42.13:0,42,648	1/1:7,2:9:6.02:134,6,0
chr10	47780230	.	A	AG	846.58	PASS	AB=0.837;AC=12;AF=0.214;AN=56;BaseQRankSum=7.413;DP=680;FS=18.819;HRun=0;HaplotypeScore=148.8276;InbreedingCoeff=-0.2854;MQ=59.55;MQ0=3;MQRankSum=-3.552;QD=3.00;ReadPosRankSum=-3.714;VQSLOD=1.0396;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:25:17.88:18,0,342	0/1:8,0:8:25.95:26,0,123	0/0:25,0:22:63.18:0,63,843	0/0:20,0:17:51.16:0,51,696	0/1:13,0:13:41.20:41,0,125	0/0:15,8:23:24.01:0,24,293	0/1:29,14:43:99:128,0,472	0/1:20,8:26:99:282,0,633	0/1:20,12:32:99:139,0,386	0/0:26,0:26:34.53:0,35,508	0/1:16,0:16:26.95:27,0,177	0/1:21,10:31:30.31:30,0,463	0/1:16,6:22:94.25:94,0,420	0/0:25,0:25:75.25:0,75,1049	0/0:31,7:38:59.77:0,60,700	0/1:18,10:27:54.89:55,0,264	0/0:28,0:28:21.53:0,22,348	0/0:25,0:25:12.51:0,13,243	0/0:31,0:30:84.63:0,85,1119	0/0:19,0:19:48.16:0,48,670	0/0:51,0:51:99:0,150,2030	0/0:13,3:15:25.40:0,25,317	0/1:9,8:16:35.15:35,0,93	0/1:15,4:19:47.42:122,0,47	0/0:13,0:13:7.66:0,8,110	0/0:27,0:27:29.30:0,29,460	0/0:26,0:26:78.26:0,78,1090	0/0:5,0:5:4.99:0,5,50
chr10	47780560	.	G	GGTGT	8919.27	PASS	AB=0.727;AC=41;AF=0.759;AN=54;BaseQRankSum=3.498;DP=591;FS=2.246;HRun=0;HaplotypeScore=135.1384;InbreedingCoeff=0.8102;MQ=54.54;MQ0=4;MQRankSum=-6.535;QD=19.60;ReadPosRankSum=-1.942;VQSLOD=4.4020;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:24:7.29:106,7,0	1/1:6,1:11:18.95:310,19,0	0/0:16,0:9:24.06:0,24,298	./.	1/1:11,0:21:15.73:309,16,0	1/1:15,1:29:12.04:209,12,0	1/1:17,1:29:8.55:155,9,0	1/1:35,0:35:32.91:407,33,0	0/1:15,8:23:6.83:647,0,7	1/1:14,0:29:61.78:962,62,0	1/1:19,0:31:12.58:254,13,0	1/1:4,9:15:32.62:726,33,0	1/1:4,15:19:33.11:799,33,0	0/0:14,0:14:30.10:0,30,473	1/1:6,0:21:27.09:470,27,0	1/1:7,0:14:18.06:295,18,0	1/1:15,0:27:15.05:261,15,0	1/1:9,0:21:15.05:261,15,0	0/0:17,0:19:1.10:0,1,203	0/0:28,0:30:69.19:0,69,1031	0/0:13,0:13:24.01:0,24,358	1/1:6,10:22:32.35:678,32,0	1/1:2,8:13:23.55:460,24,0	1/1:7,8:17:20.54:388,21,0	1/1:8,0:23:18.06:314,18,0	1/1:7,0:21:45.07:677,45,0	0/0:33,0:35:65.62:0,66,1130	1/1:0,1:8:12.04:230,12,0
chr10	47782014	.	G	GTT	2578.48	PASS	AB=0.935;AC=28;AF=0.500;AN=56;BaseQRankSum=2.867;DP=589;FS=10.737;HRun=12;HaplotypeScore=96.4913;InbreedingCoeff=0.8686;MQ=64.47;MQ0=5;MQRankSum=-2.761;QD=8.98;ReadPosRankSum=-1.414;VQSLOD=0.6917;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:35,0:35:19.39:113,19,0	1/1:3,1:10:18.51:200,19,0	0/0:19,0:13:10.89:0,11,75	0/1:21,0:17:6.51:7,0,84	0/0:26,1:27:10.30:0,10,339	1/1:13,0:16:27.86:206,28,0	1/1:13,0:15:12.83:123,13,0	1/1:13,2:38:52.58:331,53,0	1/1:4,14:19:18.06:252,18,0	0/0:27,0:27:26.35:0,26,386	0/0:23,0:23:12.69:0,13,205	1/1:4,6:11:10.03:74,10,0	1/1:12,5:17:30.11:316,30,0	0/0:16,0:16:26.82:0,27,226	1/1:10,1:14:19.50:132,20,0	1/1:3,1:11:18.03:172,18,0	0/0:28,0:28:38.85:0,39,355	0/0:21,0:22:32.61:0,33,289	0/0:23,0:25:44.67:0,45,423	0/0:16,0:16:30.61:0,31,278	0/0:22,0:22:41.49:0,41,349	1/1:5,10:16:29.46:370,29,0	1/1:4,7:11:12.68:157,13,0	1/1:4,21:28:26.58:345,27,0	0/1:17,0:20:0.21:0,0,158	0/0:20,0:21:35.47:0,35,303	0/0:32,0:33:61.22:0,61,665	0/0:18,0:19:15.58:0,16,329
chr10	47782034	.	C	CT	2275.47	PASS	AB=0.783;AC=18;AF=0.321;AN=56;BaseQRankSum=-4.155;DP=566;FS=18.322;HRun=9;HaplotypeScore=76.1577;InbreedingCoeff=0.8179;MQ=54.06;MQ0=10;MQRankSum=-0.968;QD=10.11;ReadPosRankSum=0.143;VQSLOD=0.8583;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:21,13:32:9.02:101,9,0	0/0:10,0:9:8.88:0,9,75	0/0:9,0:4:8.80:0,9,59	0/1:10,0:8:6.81:7,0,20	1/1:11,14:26:29.75:268,30,0	0/0:13,0:13:22.92:0,23,187	0/0:17,0:15:20.89:0,21,181	0/0:33,0:31:22.49:0,22,334	0/0:15,0:15:14.86:0,15,116	1/1:12,15:26:45.06:466,45,0	0/1:4,13:17:8.03:133,0,8	0/0:11,0:11:11.99:0,12,104	0/0:19,0:17:23.90:0,24,208	0/0:24,0:24:35.93:0,36,308	0/0:14,0:14:23.65:0,24,207	0/0:13,0:13:14.96:0,15,128	1/1:6,22:27:39.08:417,39,0	1/1:1,17:18:26.65:298,27,0	0/0:26,0:24:53.79:0,54,466	0/0:25,0:24:38.86:0,39,326	0/0:19,0:17:35.96:0,36,308	0/0:13,0:13:20.95:0,21,177	0/0:11,0:11:18:0,18,156	0/0:28,0:28:32.97:0,33,286	1/1:6,13:19:15.04:166,15,0	1/1:6,15:22:32.11:358,32,0	0/0:40,0:39:62.78:0,63,532	1/1:13,10:23:24.06:265,24,0
chr10	47783060	.	G	GA	1716.40	PASS	AB=0.909;AC=13;AF=0.232;AN=56;BaseQRankSum=-2.053;DP=503;FS=0.498;HRun=9;HaplotypeScore=56.1345;InbreedingCoeff=0.8656;MQ=73.03;MQ0=0;MQRankSum=-3.171;QD=20.19;ReadPosRankSum=-3.161;VQSLOD=2.7463;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:50.99:0,51,443	1/1:2,6:8:18.05:199,18,0	0/0:9,0:8:10.10:0,10,101	0/0:11,0:12:8.94:0,9,98	0/0:26,0:26:59.97:0,60,521	1/1:4,14:19:47.94:502,48,0	1/1:4,4:8:12.03:133,12,0	1/1:4,20:23:34.11:604,34,0	0/0:17,0:17:50.97:0,51,439	0/0:25,0:25:59.97:0,60,517	0/0:23,0:23:62.98:0,63,547	0/1:9,1:10:6.19:6,0,181	0/0:20,0:20:44.96:0,45,385	0/0:13,0:13:4.79:0,5,209	1/1:2,7:9:24.06:258,24,0	1/1:1,6:7:18.05:199,18,0	0/0:36,0:36:99:0,102,886	0/0:23,0:23:62.98:0,63,547	0/0:19,0:19:53.99:0,54,469	0/0:30,0:30:68.98:0,69,599	0/0:13,0:13:32.99:0,33,287	0/0:22,0:22:59.98:0,60,521	0/0:21,0:21:53.98:0,54,469	0/0:12,0:12:35.99:0,36,313	0/0:19,0:19:50.97:0,51,443	0/0:35,0:35:92.66:0,93,804	0/0:14,0:14:38.99:0,39,339	0/0:12,0:12:32.99:0,33,287
chr10	47783092	.	A	AT	1320.78	PASS	AB=0.939;AC=13;AF=0.232;AN=56;BaseQRankSum=10.444;DP=460;FS=3.422;HRun=9;HaplotypeScore=51.4125;InbreedingCoeff=0.7543;MQ=66.93;MQ0=0;MQRankSum=-3.246;QD=15.54;ReadPosRankSum=-2.033;VQSLOD=3.2493;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,1:21:53.96:0,54,465	1/1:1,6:7:21.04:222,21,0	0/1:9,0:8:0.83:1,0,79	0/0:5,0:6:11.96:0,12,103	0/0:26,0:26:71.98:0,72,625	1/1:7,18:25:65.98:674,66,0	1/1:0,5:5:15.04:165,15,0	0/0:31,0:31:64.99:0,65,553	0/0:17,0:17:41.98:0,42,365	0/0:21,0:21:50.96:0,51,443	0/0:19,0:19:41.98:0,42,365	0/0:11,0:11:26.98:0,27,234	0/0:17,0:17:44.99:0,45,390	0/0:9,0:9:23.99:0,24,206	1/1:5,8:13:7.09:284,7,0	1/1:1,4:5:12.03:132,12,0	0/0:33,0:33:89.98:0,90,781	0/0:20,0:20:47.98:0,48,417	0/0:16,0:16:38.99:0,39,338	0/0:22,0:22:56.98:0,57,495	0/1:7,1:8:9.18:9,0,158	0/0:15,0:15:44.99:0,45,391	0/0:16,0:16:41.98:0,42,365	0/0:13,0:13:35.99:0,36,313	0/0:23,0:23:62.99:0,63,547	0/0:28,0:28:77.96:0,78,673	0/1:12,1:13:0.20:0,0,222	0/0:10,0:10:23.99:0,24,208
chr10	47783659	.	ATTGG	A	4533.97	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=5.481;DP=662;FS=74.708;HRun=0;HaplotypeScore=124.1900;InbreedingCoeff=0.9958;MQ=79.15;MQ0=0;MQRankSum=-3.095;QD=45.34;ReadPosRankSum=1.703;VQSLOD=2.4370;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,129,3500	0/0:16,0:16:45.15:0,45,1227	0/0:24,0:24:66.20:0,66,1593	0/0:20,0:20:15.64:0,16,1069	0/0:24,0:24:66.23:0,66,1775	0/0:19,0:19:57.20:0,57,1555	0/0:25,0:25:75.26:0,75,2055	0/0:22,0:22:63.21:0,63,1670	1/1:2,15:16:33.11:639,33,0	0/0:38,0:38:99:0,111,3042	0/0:19,0:19:57.20:0,57,1561	1/1:0,14:14:30.10:581,30,0	1/1:0,11:11:27.09:523,27,0	0/0:24,0:24:69.24:0,69,1890	0/0:28,0:28:81.28:0,81,2192	0/0:18,0:18:54.17:0,54,1422	0/0:34,0:34:96.33:0,96,2612	0/0:27,0:27:75.26:0,75,1976	0/0:28,0:28:81.28:0,81,2213	0/0:17,0:17:51.18:0,51,1385	0/0:49,0:49:99:0,141,3713	1/1:1,23:24:66.23:1279,66,0	1/1:1,9:10:27.09:523,27,0	1/1:1,23:24:51.17:988,51,0	0/0:22,0:22:66.23:0,66,1809	0/0:29,0:29:84.28:0,84,2201	0/0:25,0:25:72.25:0,72,1963	0/0:9,0:9:21.07:0,21,575
chr10	47784751	.	A	AAAC	10940.43	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=18.453;DP=649;FS=8.020;HRun=0;HaplotypeScore=183.0198;InbreedingCoeff=0.9997;MQ=75.62;MQ0=0;MQRankSum=-6.547;QD=28.20;ReadPosRankSum=4.909;VQSLOD=4.1216;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:32,2:37:88.76:1006,89,0	0/0:14,0:14:39.12:0,39,645	0/0:27,0:27:68.93:0,69,1059	0/0:26,0:25:66.87:0,67,997	1/1:24,0:24:66.97:617,67,0	0/0:21,0:21:57.18:0,57,957	0/0:19,0:19:57.20:0,57,978	1/1:26,4:32:87.34:907,87,0	1/1:28,2:30:85.44:914,85,0	1/1:23,0:23:58.66:721,59,0	1/1:17,0:17:44.90:523,45,0	1/1:31,1:32:86.77:857,87,0	1/1:23,4:27:71.33:677,71,0	0/0:23,0:23:69.24:0,69,1194	0/0:29,0:29:84.27:0,84,1402	1/1:25,1:26:68.83:731,69,0	1/1:18,1:19:51.10:588,51,0	1/1:10,4:13:31.53:332,32,0	0/0:21,0:21:60.21:0,60,1038	0/0:26,0:26:78.23:0,78,1265	0/0:25,0:25:72.20:0,72,1141	1/1:19,1:21:53.16:535,53,0	1/1:11,0:11:31.17:291,31,0	1/1:18,0:18:48.12:521,48,0	1/1:21,0:21:53.97:622,54,0	1/1:26,0:26:77.97:828,78,0	0/0:30,0:29:87.29:0,87,1465	1/1:9,0:9:27.03:270,27,0
chr10	47784752	.	AG	A	9539.87	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=20.560;DP=626;FS=10.048;HRun=1;HaplotypeScore=157.0185;InbreedingCoeff=0.9982;MQ=76.23;MQ0=0;MQRankSum=-4.558;QD=26.14;ReadPosRankSum=5.819;VQSLOD=3.5957;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,32:35:91.25:834,91,0	0/0:14,0:14:42.11:0,42,607	0/0:27,0:27:75.06:0,75,1067	0/0:25,1:25:16.94:0,17,855	1/1:0,24:24:68.91:636,69,0	0/0:19,0:19:57.18:0,57,865	0/0:19,0:19:57.19:0,57,889	1/1:2,22:24:61.49:567,61,0	1/1:2,27:29:79.36:751,79,0	1/1:2,18:21:59.33:600,59,0	1/1:1,15:16:47.35:424,47,0	1/1:3,28:30:87.05:826,87,0	1/1:3,23:26:71.67:641,72,0	0/0:23,0:23:69.23:0,69,1079	0/0:30,0:30:90.25:0,90,1320	1/1:4,21:25:68.97:664,69,0	1/1:2,16:18:47.60:484,48,0	1/1:3,10:12:27.25:267,27,0	0/0:21,0:21:63.21:0,63,966	0/0:26,0:26:78.21:0,78,1147	0/0:26,0:26:78.18:0,78,1094	1/1:1,18:20:58.71:512,59,0	1/1:1,10:11:32.90:299,33,0	1/1:2,15:17:48.09:484,48,0	1/1:0,20:20:53.90:525,54,0	1/1:2,24:26:77.60:762,78,0	0/0:30,0:29:90.28:0,90,1355	1/1:1,8:9:27.04:265,27,0
chr10	47784754	.	AGG	A	11062.46	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=20.208;DP=624;FS=8.610;HRun=3;HaplotypeScore=163.4693;InbreedingCoeff=0.9996;MQ=77.49;MQ0=0;MQRankSum=-7.413;QD=30.73;ReadPosRankSum=5.686;VQSLOD=3.8642;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,32:35:95.55:1022,96,0	0/0:13,0:13:36.11:0,36,648	0/0:29,0:29:80.91:0,81,1370	0/0:26,0:25:55.78:0,56,1034	1/1:1,22:23:66.15:719,66,0	0/0:18,0:18:51.17:0,51,953	0/0:18,0:18:54.19:0,54,1043	1/1:2,22:24:69.74:668,70,0	1/1:1,27:28:83.87:892,84,0	1/1:1,19:20:56.99:652,57,0	1/1:1,15:16:47.33:474,47,0	1/1:3,28:30:87.21:961,87,0	1/1:2,23:25:71.77:732,72,0	0/0:25,0:25:75.23:0,75,1383	0/0:31,0:31:93.30:0,93,1705	1/1:2,23:25:67.02:741,67,0	1/1:1,17:18:53.79:581,54,0	1/1:2,10:11:32.67:336,33,0	0/0:24,0:24:72.20:0,72,1209	0/0:25,0:25:72.24:0,72,1356	0/0:25,0:25:75.17:0,75,1261	1/1:3,18:21:59.69:597,60,0	1/1:1,10:11:33.09:373,33,0	1/1:2,15:17:48.14:565,48,0	1/1:3,17:20:52.02:581,52,0	1/1:2,24:26:78.21:896,78,0	0/0:30,0:29:87.29:0,87,1613	1/1:0,8:8:24.07:273,24,0
chr10	47785297	.	A	AT	975.98	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-9.203;DP=608;FS=0.693;HRun=7;HaplotypeScore=71.9609;InbreedingCoeff=0.9813;MQ=68.73;MQ0=2;MQRankSum=-3.831;QD=25.03;ReadPosRankSum=-1.867;VQSLOD=3.4410;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,105,1004	0/0:7,0:7:18.03:0,18,174	0/0:19,0:17:35.97:0,36,325	0/0:12,0:12:27.01:0,27,252	0/0:29,0:29:84.13:0,84,811	0/0:28,0:28:81.09:0,81,770	0/0:16,0:16:39.04:0,39,370	1/1:8,31:39:90.23:1071,90,0	0/0:26,0:26:60.08:0,60,575	0/0:31,0:31:84.07:0,84,796	0/0:19,0:19:57.08:0,57,543	0/0:13,0:13:39.06:0,39,377	0/0:19,0:19:48.04:0,48,456	0/0:9,0:9:27.04:0,27,261	0/0:22,0:22:63.08:0,63,602	0/0:13,0:13:30:0,30,278	0/0:26,0:26:60.08:0,60,579	0/0:7,0:7:18.02:0,18,169	0/0:28,0:28:66.10:0,66,637	0/0:33,0:33:87.11:0,87,834	0/0:24,0:24:51.04:0,51,481	0/0:17,0:17:45.07:0,45,434	0/0:20,0:20:57.07:0,57,543	0/0:16,0:16:42.06:0,42,401	0/0:16,0:16:48.08:0,48,464	0/0:30,0:29:81.13:0,81,782	0/0:27,0:27:69.11:0,69,666	0/0:20,0:20:60.10:0,60,579
chr10	47785740	.	T	TACAC	12635.29	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-9.430;DP=802;FS=18.149;HRun=0;HaplotypeScore=152.3938;InbreedingCoeff=0.9997;MQ=60.56;MQ0=3;MQRankSum=-2.022;QD=36.84;ReadPosRankSum=-0.269;VQSLOD=3.9515;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:12,25:38:66.22:1590,66,0	0/0:1,0:12:33.04:0,33,307	0/0:33,0:25:35.89:0,36,558	0/0:20,0:17:36.09:0,36,528	1/1:9,23:34:54.19:1352,54,0	0/0:2,0:24:57.07:0,57,531	0/0:2,0:17:33.04:0,33,307	1/1:15,0:42:57.62:368,58,0	0/0:37,0:37:87.28:0,87,1456	1/1:7,29:37:90.97:2162,91,0	1/1:6,12:18:33.11:804,33,0	0/0:39,0:39:99:0,108,1751	0/0:30,0:30:84.23:0,84,1330	0/0:25,0:25:63.22:0,63,1073	0/0:5,0:30:72.08:0,72,671	1/1:9,0:40:69.89:315,70,0	1/1:6,23:30:51.17:1246,51,0	1/1:7,12:19:33.10:780,33,0	0/0:17,0:17:45.14:0,45,737	0/0:34,0:34:84.24:0,84,1356	0/0:44,0:44:99:0,99,1662	0/0:22,0:22:51:0,51,834	0/0:15,0:15:35.89:0,36,590	0/0:29,0:29:57.12:0,57,966	1/1:8,27:35:54.19:1358,54,0	1/1:7,29:37:87.19:1969,87,0	0/0:31,0:30:90.29:0,90,1499	1/1:2,9:12:29.89:692,30,0
chr10	47786638	.	TA	T	3146.14	PASS	AB=1.000;AC=25;AF=0.463;AN=54;BaseQRankSum=4.098;DP=285;FS=1.220;HRun=8;HaplotypeScore=52.2926;InbreedingCoeff=0.6887;MQ=79.59;MQ0=3;MQRankSum=-2.902;QD=19.54;ReadPosRankSum=-2.197;VQSLOD=2.7897;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,10:11:26.96:245,27,0	0/0:3,0:3:7.73:0,8,31	0/0:20,1:11:12.01:0,12,119	0/0:22,0:13:17.16:0,17,125	1/1:1,4:5:9:84,9,0	0/0:14,0:14:10.83:0,11,103	0/0:5,0:5:13.39:0,13,56	1/1:3,32:35:93.51:856,94,0	0/1:7,0:7:8.72:9,0,37	1/1:4,10:14:30.05:296,30,0	1/1:2,7:9:24.02:225,24,0	0/1:5,0:5:19.72:36,0,20	0/0:2,0:2:2.37:0,2,8	0/0:6,0:6:15.05:0,15,180	0/1:7,0:7:4.62:5,0,40	1/1:3,4:7:15.01:139,15,0	1/1:4,10:14:36.02:334,36,0	1/1:3,11:14:33.02:315,33,0	0/0:13,0:13:33.09:0,33,385	0/0:15,0:15:27.08:0,27,323	0/0:3,0:3:3.01:0,3,36	0/0:3,0:3:5.36:0,5,22	./.	0/0:4,0:4:8.17:0,8,36	1/1:3,11:14:35.92:321,36,0	1/1:2,12:14:36.05:344,36,0	0/0:11,0:11:27.07:0,27,309	1/1:0,5:5:15.02:141,15,0
chr10	47786647	.	GTATT	G	1888.87	PASS	AC=20;AF=0.435;AN=46;BaseQRankSum=8.243;DP=259;FS=3.439;HRun=0;HaplotypeScore=66.4565;InbreedingCoeff=0.7874;MQ=66.72;MQ0=2;MQRankSum=-5.279;QD=19.88;ReadPosRankSum=1.958;VQSLOD=3.1829;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,5:11:15.05:229,15,0	0/0:3,0:3:6.02:0,6,145	./.	0/0:16,0:9:0:0,0,0	1/1:2,2:4:9.02:118,9,0	0/0:15,0:15:42.13:0,42,902	0/0:5,0:5:3.01:0,3,73	0/0:43,0:42:75.70:0,76,1583	0/0:6,0:6:9.03:0,9,218	1/1:8,2:10:18.05:246,18,0	1/1:7,1:8:3.01:49,3,0	0/0:5,0:5:9.03:0,9,198	0/0:1,0:1:3.01:0,3,73	0/0:6,0:6:9.03:0,9,215	0/0:7,0:7:15.05:0,15,363	1/1:2,3:5:9.03:131,9,0	1/1:5,9:14:24.08:363,24,0	1/1:8,5:13:17.93:264,18,0	0/0:16,0:14:30.08:0,30,676	0/0:9,0:9:12.03:0,12,222	./.	./.	./.	./.	1/1:6,6:12:21.07:331,21,0	1/1:9,3:12:9.03:143,9,0	0/0:11,0:11:21.05:0,21,414	1/1:3,3:6:12.04:191,12,0
chr10	47790571	.	AAATAATAAT	A	1688.44	PASS	AB=0.733;AC=25;AF=0.595;AN=42;BaseQRankSum=1.387;DP=254;FS=2.660;HRun=0;HaplotypeScore=75.6763;InbreedingCoeff=0.4657;MQ=68.96;MQ0=3;MQRankSum=-4.304;QD=13.09;ReadPosRankSum=-0.628;VQSLOD=1.6880;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	1/1:0,0:1:3.01:41,3,0	./.	./.	1/1:3,3:6:3.01:53,3,0	1/1:12,0:24:18:276,18,0	./.	./.	./.	1/1:6,2:8:6:106,6,0	1/1:2,1:3:3.01:82,3,0	1/1:5,1:6:3.01:82,3,0	1/1:3,3:6:9.03:245,9,0	0/0:4,0:4:3.01:0,3,136	1/1:9,0:14:12:147,12,0	0/0:9,0:9:3.01:0,3,84	1/1:13,6:19:6.02:158,6,0	1/1:7,5:11:6.02:163,6,0	0/0:6,0:6:9.03:0,9,373	0/0:5,0:5:3.01:0,3,118	0/0:6,0:8:3.01:0,3,118	./.	0/0:5,0:6:6.01:0,6,84	0/0:3,0:4:6.01:0,6,83	0/1:7,3:11:48.58:154,0,49	1/1:8,0:8:3.01:82,3,0	0/0:3,0:6:12.04:0,12,489	1/1:7,4:11:9.03:245,9,0
chr10	47790597	.	AT	A	359.78	PASS	AB=1.000;AC=6;AF=0.120;AN=50;BaseQRankSum=2.132;DP=152;FS=0.961;HRun=1;HaplotypeScore=41.0153;InbreedingCoeff=0.3626;MQ=51.28;MQ0=4;MQRankSum=1.457;QD=12.85;ReadPosRankSum=-2.535;VQSLOD=1.4041;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:8:22.90:0,23,224	0/0:1,0:1:2.50:0,2,9	0/0:1,0:1:3.01:0,3,41	./.	0/0:4,0:4:6.01:0,6,70	0/0:17,0:17:8.71:0,9,175	1/1:2,0:2:5.01:27,5,0	1/1:2,13:13:39.06:434,39,0	./.	0/0:8,0:8:20.60:0,21,282	0/0:3,0:3:5.97:0,6,85	0/0:3,0:3:5.59:0,6,85	0/1:4,0:4:0:1,0,0	0/0:2,0:2:6.02:0,6,91	0/1:7,0:7:9.60:10,0,86	0/0:2,0:2:6.01:0,6,73	0/0:22,0:22:52.58:0,53,702	0/0:11,0:10:14.26:0,14,191	0/0:7,0:7:18.06:0,18,241	0/0:1,0:1:3.01:0,3,30	0/0:5,0:5:12.04:0,12,157	./.	0/0:3,0:3:7.84:0,8,90	0/0:3,0:3:7.84:0,8,90	0/0:7,0:7:10.08:0,10,132	0/0:3,0:3:5.71:0,6,69	0/0:6,0:6:18.03:0,18,205	0/0:6,0:6:1.82:0,2,40
chr10	47792160	.	G	GTT	6523.78	PASS	AB=0.561;AC=39;AF=0.696;AN=56;BaseQRankSum=5.427;DP=639;FS=4.774;HRun=10;HaplotypeScore=96.3642;InbreedingCoeff=0.7913;MQ=66.53;MQ0=0;MQRankSum=-3.435;QD=13.26;ReadPosRankSum=1.923;VQSLOD=3.1919;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:37:64.88:228,65,0	0/1:2,0:10:12.54:35,0,13	0/0:15,0:15:33.04:0,33,331	0/0:12,0:12:20.52:0,21,166	0/1:7,0:30:0.12:132,0,0	1/1:2,0:24:17.42:127,17,0	1/1:5,0:20:32.44:114,32,0	1/1:10,19:28:57.13:802,57,0	1/1:3,14:18:42.14:610,42,0	1/1:12,0:35:20.25:137,20,0	1/1:2,1:22:51.87:250,52,0	1/1:5,10:16:26.58:365,27,0	1/1:5,15:23:51.14:707,51,0	0/0:20,0:21:50.82:0,51,493	1/1:3,0:21:37.77:141,38,0	1/1:2,0:22:47.41:167,47,0	1/1:3,0:37:77.23:272,77,0	0/1:6,1:26:9.71:142,0,10	0/0:14,0:14:39.08:0,39,397	0/0:27,0:27:63.10:0,63,641	0/0:26,0:26:54.04:0,54,549	1/1:4,19:25:57.14:800,57,0	1/1:1,17:21:39.09:526,39,0	1/1:3,13:17:36.12:537,36,0	1/1:5,0:21:16.43:108,16,0	1/1:4,0:23:48:181,48,0	0/0:31,0:31:71.95:0,72,698	1/1:0,1:14:30.46:141,30,0
chr10	47792373	.	GAGGCGTTGTT	G	5495.14	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=11.463;DP=640;FS=1.705;HRun=0;HaplotypeScore=189.5592;InbreedingCoeff=0.9835;MQ=86.90;MQ0=0;MQRankSum=-11.831;QD=80.81;ReadPosRankSum=2.681;VQSLOD=4.7899;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,120,5947	1/1:1,5:5:9.03:300,9,0	0/0:16,0:16:42.14:0,42,1984	0/0:32,0:32:83.47:0,83,3808	0/0:25,0:25:72.23:0,72,3557	1/1:2,15:17:42.14:1396,42,0	1/1:5,20:25:57.20:1899,57,0	0/0:25,0:25:75.24:0,75,3410	0/0:20,0:20:60.21:0,60,2952	0/0:28,0:28:81.28:0,81,4217	0/0:22,0:22:60.21:0,60,3141	0/0:27,0:27:78.24:0,78,3752	0/0:20,0:20:57.18:0,57,2874	0/0:23,0:23:69.24:0,69,3553	1/1:0,20:20:57.20:1900,57,0	0/0:16,0:16:42.13:0,42,2008	0/0:36,0:36:99:0,102,5127	0/0:12,0:12:36.12:0,36,1922	0/0:31,0:31:81.27:0,81,3848	0/0:28,0:28:81.28:0,81,4032	0/0:22,0:22:66.23:0,66,3319	0/0:21,0:21:60.21:0,60,2990	0/0:24,0:24:72.20:0,72,3623	0/0:19,0:19:51.18:0,51,2628	0/0:17,0:17:51.18:0,51,2589	0/0:24,0:24:69.23:0,69,3486	0/0:31,0:31:90.30:0,90,4568	0/0:12,0:12:36.12:0,36,1817
chr10	47796451	.	TG	T	5772.96	PASS	AB=1.000;AC=27;AF=0.482;AN=56;BaseQRankSum=13.782;DP=617;FS=5.888;HRun=1;HaplotypeScore=100.7524;InbreedingCoeff=0.9396;MQ=57.82;MQ0=8;MQRankSum=-2.789;QD=17.28;ReadPosRankSum=2.282;VQSLOD=5.1806;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,26:33:72.82:946,73,0	1/1:3,8:11:33.01:300,33,0	0/0:36,0:17:12.31:0,12,463	0/1:46,0:24:4.89:5,0,381	1/1:1,24:25:56.47:423,56,0	1/1:3,9:11:28.30:278,28,0	1/1:7,14:20:42.25:328,42,0	0/0:29,0:26:54.16:0,54,739	0/0:11,0:11:33.09:0,33,460	1/1:2,29:31:81.56:679,82,0	1/1:0,17:17:25.23:221,25,0	0/0:15,0:15:45.04:0,45,628	0/0:7,0:7:18.06:0,18,263	0/0:19,0:19:57.18:0,57,811	1/1:2,14:16:44.98:410,45,0	0/0:15,0:14:21.07:0,21,292	1/1:1,35:36:68.14:638,68,0	1/1:9,17:25:65.46:544,65,0	0/0:25,0:24:71.44:0,71,987	0/0:25,0:25:66.20:0,66,943	0/0:16,0:16:32.05:0,32,458	0/0:24,0:23:69.22:0,69,985	0/0:15,0:15:37.11:0,37,584	0/0:24,0:24:69.19:0,69,963	1/1:0,21:20:29.89:267,30,0	1/1:2,23:24:63.31:520,63,0	0/0:22,0:22:66.21:0,66,944	1/1:7,6:12:25.80:214,26,0
chr10	47796455	.	TTG	T	6409.48	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=13.699;DP=608;FS=2.016;HRun=0;HaplotypeScore=106.7786;InbreedingCoeff=0.9976;MQ=56.85;MQ0=8;MQRankSum=-4.169;QD=22.49;ReadPosRankSum=3.718;VQSLOD=5.5174;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:37,0:36:25.26:116,25,0	1/1:1,8:9:27.03:260,27,0	0/0:36,0:16:36.91:0,37,456	0/0:46,0:22:36.83:0,37,463	1/1:25,0:25:48.93:600,49,0	1/1:2,9:10:26.74:274,27,0	1/1:9,13:21:41.75:341,42,0	0/0:32,0:29:48.94:0,49,630	0/0:10,0:10:30.10:0,30,530	1/1:29,1:30:79.72:1018,80,0	1/1:16,0:16:28.40:313,28,0	0/0:15,0:15:45.14:0,45,741	0/0:7,0:7:21.07:0,21,349	0/0:18,0:18:51.17:0,51,894	1/1:4,13:17:41.62:407,42,0	0/0:15,0:14:21.06:0,21,269	1/1:35,0:35:72.29:972,72,0	1/1:25,0:24:52.94:696,53,0	0/0:25,0:24:69.66:0,70,1067	0/0:23,0:23:63.19:0,63,1079	0/0:12,0:12:30.10:0,30,523	0/0:25,0:24:72.22:0,72,1210	0/0:15,0:15:42.14:0,42,748	0/0:22,0:22:63.13:0,63,1071	1/1:19,0:18:29.81:375,30,0	1/1:25,0:24:57.16:789,57,0	0/0:22,0:22:66.21:0,66,1126	1/1:13,1:13:21.93:249,22,0
chr10	47796456	.	TG	T	5444.16	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=14.209;DP=602;FS=3.010;HRun=1;HaplotypeScore=99.5984;InbreedingCoeff=0.9971;MQ=55.79;MQ0=8;MQRankSum=-4.558;QD=19.44;ReadPosRankSum=3.262;VQSLOD=5.3564;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:37,0:36:73.65:942,74,0	1/1:9,0:9:26.94:227,27,0	0/0:32,0:13:21.61:0,22,363	0/0:47,0:22:32.11:0,32,353	1/1:13,12:25:50.54:382,51,0	1/1:11,0:10:20.85:227,21,0	1/1:20,1:20:41.62:302,42,0	0/0:33,0:30:65.90:0,66,672	0/0:10,0:10:30.10:0,30,435	1/1:7,23:30:79.24:657,79,0	1/1:8,8:16:27.29:226,27,0	0/0:15,0:15:45.14:0,45,637	0/0:7,0:7:21.07:0,21,301	0/0:18,0:18:51.17:0,51,745	1/1:16,1:17:44.55:372,45,0	0/0:15,0:14:20.87:0,21,189	1/1:12,23:35:71.54:644,72,0	1/1:10,15:24:56.82:497,57,0	0/0:26,0:25:75.05:0,75,950	0/0:23,0:23:63.19:0,63,882	0/0:12,0:12:30.09:0,30,419	0/0:26,0:25:72.13:0,72,975	0/0:14,0:14:42.12:0,42,581	0/0:22,0:22:58.65:0,59,873	1/1:8,11:18:29.95:271,30,0	1/1:7,17:23:56.85:469,57,0	0/0:22,0:22:66.07:0,66,890	1/1:7,4:10:26.94:228,27,0
chr10	47796457	.	G	GTTTTC	474.83	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=-0.875;DP=602;FS=3.929;HRun=0;HaplotypeScore=159.0847;InbreedingCoeff=0.5624;MQ=55.40;MQ0=9;MQRankSum=-0.815;QD=9.69;ReadPosRankSum=-0.391;VQSLOD=2.5154;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:36:60.06:0,60,665	0/0:9,0:9:24.05:0,24,257	0/0:32,0:13:14.69:0,15,166	0/0:46,0:21:13.36:0,13,102	0/0:25,0:25:30.68:0,31,263	0/0:11,0:10:27.01:0,27,290	0/0:21,0:20:29.98:0,30,347	0/1:32,0:29:99:219,0,170	0/0:10,0:10:26.74:0,27,410	0/0:31,0:30:63.99:0,64,566	0/0:16,0:16:17.75:0,18,169	0/0:16,0:16:36.06:0,36,538	0/0:7,0:7:14.97:0,15,221	0/0:17,0:17:45.09:0,45,717	0/0:17,0:17:36.08:0,36,389	1/1:4,11:16:12.04:356,12,0	0/0:34,0:35:73.39:0,73,785	0/0:24,0:23:38.79:0,39,398	0/0:20,0:22:56.89:0,57,697	0/0:21,0:21:53.75:0,54,951	0/0:12,0:12:26.77:0,27,465	0/0:25,0:24:48.04:0,48,799	0/0:14,0:14:42.12:0,42,682	0/0:23,0:23:57.49:0,57,986	0/0:20,0:19:20.93:0,21,224	0/0:24,0:23:41.93:0,42,427	0/0:25,0:25:51.08:0,51,878	0/0:12,0:11:8.74:0,9,116
chr10	47796758	.	A	AT	4012.46	PASS	AB=0.923;AC=27;AF=0.482;AN=56;BaseQRankSum=-7.721;DP=464;FS=5.921;HRun=11;HaplotypeScore=49.9075;InbreedingCoeff=0.8625;MQ=63.52;MQ0=0;MQRankSum=-0.805;QD=16.31;ReadPosRankSum=2.796;VQSLOD=4.4182;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,20:27:22.74:405,23,0	1/1:0,6:6:12.02:122,12,0	0/1:10,1:11:14.82:15,0,53	0/0:8,0:7:14.62:0,15,90	1/1:6,19:26:44.73:394,45,0	1/1:5,12:18:15.67:326,16,0	1/1:2,14:16:33.07:335,33,0	0/0:23,0:23:41.78:0,42,325	0/0:18,0:19:37.86:0,38,284	1/1:7,18:25:42.02:460,42,0	1/1:7,10:17:9.82:276,10,0	0/0:7,0:7:11.93:0,12,93	0/0:8,0:8:23.71:0,24,174	0/0:15,0:15:29.82:0,30,227	1/1:4,8:12:18.04:182,18,0	0/0:15,0:15:23.83:0,24,185	1/1:3,18:21:27.87:464,28,0	1/1:2,17:19:39.08:396,39,0	0/0:21,1:24:24.03:0,24,337	0/0:20,0:21:46.83:0,47,354	0/0:17,0:17:47.80:0,48,369	0/0:12,0:12:20.88:0,21,162	0/0:7,0:7:14.91:0,15,116	0/0:19,0:20:46.85:0,47,354	1/1:4,10:14:20.88:197,21,0	1/1:7,17:24:1.90:380,2,0	0/0:21,0:22:55.76:0,56,416	1/1:3,5:8:6.01:61,6,0
chr10	47797876	.	GCT	G	297.37	PASS	AB=0.994;AC=21;AF=0.457;AN=46;BaseQRankSum=-2.477;DP=334;FS=0.000;HRun=0;HaplotypeScore=61.2181;InbreedingCoeff=0.3319;MQ=42.73;MQ0=66;MQRankSum=2.537;QD=1.91;ReadPosRankSum=2.385;VQSLOD=1.0579;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:12:0.31:0,0,1	0/0:2,0:1:1.25:0,1,3	0/0:35,0:3:2.88:0,3,15	0/1:52,0:9:8.12:8,0,11	0/0:14,0:11:8.05:0,8,25	./.	0/0:5,0:4:0.47:0,0,1	1/1:12,8:17:1.41:179,1,0	1/1:6,7:13:5.60:42,6,0	0/0:10,0:6:4.50:0,4,22	0/0:11,0:9:0.77:0,1,3	1/1:5,5:9:3.01:35,3,0	1/1:6,0:6:9.03:104,9,0	./.	./.	1/1:10,0:10:2.79:13,3,0	0/0:7,0:5:1.25:0,1,3	./.	0/0:18,0:8:3.48:0,3,30	0/0:14,0:13:2.48:0,2,46	0/0:10,0:15:3:0,3,27	1/1:10,0:10:2.47:23,2,0	./.	1/1:7,5:10:0.47:1,0,0	1/1:7,0:7:0.29:0,0,0	0/1:5,0:5:0:0,0,0	0/1:5,0:2:0:0,0,0	1/1:5,0:3:1.24:3,1,0
chr10	47799348	.	A	AGTGTGT	4206.02	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-0.253;DP=966;FS=5.876;HRun=0;HaplotypeScore=220.1455;InbreedingCoeff=0.8958;MQ=54.32;MQ0=16;MQRankSum=-6.596;QD=11.28;ReadPosRankSum=-0.820;VQSLOD=1.9820;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:52:1.77:0,2,18	1/1:11,1:12:11.22:216,11,0	0/0:43,0:18:15.01:0,15,230	0/0:53,0:23:18.03:0,18,262	0/0:25,0:27:51.14:0,51,949	1/1:14,1:29:5.99:134,6,0	1/1:25,1:43:4.79:86,5,0	1/1:31,0:35:15.94:113,16,0	1/1:24,16:44:23.52:532,24,0	0/0:23,0:24:42.03:0,42,678	0/0:18,0:18:36.08:0,36,622	1/1:15,23:42:35.82:962,36,0	1/1:15,16:34:30.10:855,30,0	0/0:31,0:35:63.09:0,63,1205	1/1:12,26:44:20.98:566,21,0	0/0:15,0:33:15.01:0,15,289	0/0:32,0:31:57.17:0,57,1123	0/0:26,0:27:52.06:0,52,1026	0/0:28,0:28:32.48:0,32,463	0/0:26,0:28:43.36:0,43,814	0/0:70,0:77:99:0,119,2156	1/1:12,13:27:15.01:430,15,0	1/1:5,7:16:5.82:77,6,0	1/1:23,17:46:9.03:235,9,0	0/0:20,0:22:29.21:0,29,961	0/0:34,0:35:56.92:0,57,1057	0/0:29,0:34:75.13:0,75,1344	0/0:19,0:20:47.84:0,48,923
chr10	47799924	.	T	TTTTC	7433.14	PASS	AB=0.714;AC=39;AF=0.813;AN=48;BaseQRankSum=-6.442;DP=612;FS=3.072;HRun=0;HaplotypeScore=107.9858;InbreedingCoeff=0.7697;MQ=62.18;MQ0=9;MQRankSum=3.671;QD=15.23;ReadPosRankSum=-1.870;VQSLOD=4.4466;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:20,15:34:30.10:673,30,0	0/0:5,0:13:11.97:0,12,112	./.	./.	1/1:13,12:25:27.09:624,27,0	0/0:9,0:20:27.03:0,27,251	0/0:9,0:18:12.01:0,12,112	1/1:26,0:25:3.74:9,4,0	1/1:9,0:15:15.04:240,15,0	1/1:20,9:29:24.07:479,24,0	1/1:21,9:29:23.99:436,24,0	1/1:8,0:15:12.04:208,12,0	1/1:11,0:10:14.91:180,15,0	1/1:15,0:20:9.03:156,9,0	0/0:10,0:18:6.01:0,6,56	1/1:10,0:12:23.75:233,24,0	0/1:21,13:34:0.66:793,0,1	1/1:13,7:19:15.52:347,16,0	1/1:26,0:23:23.94:331,24,0	1/1:33,0:33:35.57:341,36,0	./.	1/1:9,8:18:20.87:330,21,0	1/1:17,0:26:6.02:104,6,0	./.	1/1:14,13:26:30.10:680,30,0	1/1:12,14:26:20.04:743,20,0	1/1:23,0:33:15.03:248,15,0	1/1:17,4:23:12.04:277,12,0
chr10	47801329	.	AGAGGAG	A	7563.61	PASS	AB=0.835;AC=28;AF=0.500;AN=56;BaseQRankSum=5.098;DP=583;FS=10.861;HRun=0;HaplotypeScore=156.4345;InbreedingCoeff=0.7830;MQ=41.80;MQ0=64;MQRankSum=-4.540;QD=22.85;ReadPosRankSum=-2.826;VQSLOD=3.3700;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:31,7:34:21.66:699,22,0	1/1:2,4:5:12.04:266,12,0	0/0:27,0:4:5.96:0,6,44	0/0:38,0:8:9:0,9,144	1/1:11,8:18:35.03:374,35,0	1/1:20,8:27:52.37:974,52,0	0/1:26,6:30:7.91:857,0,8	0/1:23,0:23:81.97:82,0,88	0/0:14,0:12:24.02:0,24,346	1/1:17,5:17:10.99:449,11,0	1/1:14,7:21:51.68:697,52,0	0/0:9,0:6:17.83:0,18,143	0/0:7,0:5:11.89:0,12,155	0/0:21,0:20:47.35:0,47,947	1/1:15,3:15:25.78:479,26,0	1/1:7,0:4:3.48:54,3,0	1/1:24,3:28:57.81:723,58,0	1/1:17,1:16:24.07:403,24,0	0/0:17,0:12:26.85:0,27,610	0/0:17,0:17:39.03:0,39,823	0/0:48,0:42:90.14:0,90,2036	0/0:11,0:11:27.01:0,27,292	0/0:16,0:14:32.62:0,33,384	0/0:19,0:18:42.46:0,42,536	1/1:21,5:22:57.46:826,57,0	1/1:23,8:29:20.31:630,20,0	0/0:7,0:4:9.01:0,9,145	1/1:7,0:3:5.99:51,6,0
chr10	47801335	.	G	GGAA	8349.74	PASS	AB=1.000;AC=28;AF=0.500;AN=56;BaseQRankSum=8.505;DP=581;FS=0.000;HRun=0;HaplotypeScore=141.9035;InbreedingCoeff=0.7996;MQ=40.78;MQ0=65;MQRankSum=-6.247;QD=25.00;ReadPosRankSum=1.026;VQSLOD=4.9492;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:34,1:32:74.98:900,75,0	1/1:5,0:4:12.04:187,12,0	0/0:27,0:3:5.96:0,6,44	0/0:36,0:5:9:0,9,124	1/1:21,0:20:41.85:417,42,0	1/1:28,0:26:74.93:1096,75,0	1/1:29,4:31:8.82:862,9,0	0/1:31,0:25:43.94:44,0,184	0/0:12,0:10:23.07:0,23,263	1/1:20,0:15:42.87:494,43,0	1/1:21,0:20:53.99:705,54,0	0/0:9,0:6:14.12:0,14,249	0/0:7,0:5:11.91:0,12,165	0/0:22,0:20:51.14:0,51,741	1/1:19,0:16:42.05:584,42,0	0/1:7,0:4:10.04:47,0,10	1/1:29,1:28:51.11:816,51,0	1/1:20,0:18:15.62:407,16,0	0/0:15,0:10:30:0,30,412	0/0:15,0:15:39.12:0,39,628	0/0:50,0:44:90.04:0,90,1353	0/0:12,0:11:30.08:0,30,451	0/0:14,0:12:32.27:0,32,446	0/0:18,0:17:41.61:0,42,589	1/1:28,0:24:62.81:872,63,0	1/1:27,1:26:45.74:853,46,0	0/0:10,0:7:10.97:0,11,147	1/1:8,0:3:5.99:67,6,0
chr10	47801350	.	GGAA	G	5029.07	PASS	AB=0.976;AC=35;AF=0.625;AN=56;BaseQRankSum=5.062;DP=543;FS=6.744;HRun=0;HaplotypeScore=138.8681;InbreedingCoeff=0.1723;MQ=40.49;MQ0=64;MQRankSum=-2.414;QD=11.59;ReadPosRankSum=-0.786;VQSLOD=4.0808;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:32,5:34:74.21:659,74,0	1/1:5,0:4:10.27:39,10,0	0/0:16,0:2:3.01:0,3,32	0/0:17,0:2:2.98:0,3,21	0/1:19,2:21:6.46:241,0,6	1/1:23,1:22:44.57:370,45,0	1/1:27,4:28:15.94:436,16,0	0/1:28,0:21:96.97:97,0,124	0/1:9,0:7:3.70:48,0,4	1/1:18,4:17:40.47:377,40,0	1/1:19,1:19:14.47:171,14,0	1/1:13,0:10:8.95:199,9,0	0/1:7,0:5:3.28:40,0,3	0/1:22,0:20:1.79:2,0,443	1/1:17,1:15:33.78:305,34,0	1/1:9,0:5:12.70:81,13,0	0/1:27,3:27:10.49:508,0,10	0/1:20,2:19:7.87:220,0,8	0/0:17,0:11:16.38:0,16,257	0/0:12,0:12:0.21:0,0,213	0/0:47,0:41:65.35:0,65,650	0/1:13,0:10:0.93:133,0,1	0/1:15,0:11:74.35:74,0,77	0/1:12,0:11:15.36:107,0,15	1/1:24,4:23:37.50:456,37,0	1/1:25,2:24:57.20:401,57,0	0/1:10,0:7:4.16:4,0,48	1/1:5,6:7:5.69:62,6,0
chr10	47802080	.	ATGTGTGTG	A	1932.34	PASS	AB=0.924;AC=35;AF=0.673;AN=52;BaseQRankSum=4.401;DP=573;FS=23.127;HRun=0;HaplotypeScore=182.2659;InbreedingCoeff=-0.0401;MQ=60.09;MQ0=15;MQRankSum=-2.164;QD=4.29;ReadPosRankSum=-1.324;VQSLOD=1.1940;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:1.62:0,2,22	0/1:11,0:12:15.47:74,0,15	1/1:50,0:20:0.68:3,1,0	0/0:56,0:15:6.02:0,6,78	0/1:29,0:29:2.44:2,0,46	1/1:22,0:23:18.03:226,18,0	0/1:24,0:25:13.54:38,0,14	0/1:17,0:25:61.67:62,0,67	1/1:15,2:17:12.04:210,12,0	0/1:25,0:26:8.62:168,0,9	0/0:7,0:7:0.43:0,0,1	1/1:7,0:13:2.34:8,2,0	1/1:4,0:8:8.15:191,8,0	1/1:7,2:10:2.97:20,3,0	0/1:30,0:32:29.52:160,0,30	1/1:19,0:22:9.03:167,9,0	0/1:16,0:16:4.03:4,0,154	0/1:11,0:12:43.31:43,0,76	1/1:17,0:17:0.17:0,0,0	1/1:10,1:12:6.01:65,6,0	./.	1/1:10,4:15:0.47:1,0,0	0/1:3,0:4:0:0,0,0	1/1:8,0:9:5.49:34,5,0	0/1:20,0:20:12.51:24,0,13	0/1:30,1:31:99:263,0,200	1/1:9,4:18:23.37:302,23,0	./.
chr10	47802100	.	GTGTGTGTGTGTGTGTA	G	471.47	PASS	AB=0.963;AC=10;AF=0.185;AN=54;BaseQRankSum=7.316;DP=503;FS=1.583;HRun=0;HaplotypeScore=239.5101;InbreedingCoeff=-0.2695;MQ=41.57;MQ0=18;MQRankSum=-6.307;QD=1.94;ReadPosRankSum=-0.780;VQSLOD=2.6325;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:3.41:0,3,156	0/1:13,0:13:14.28:14,0,190	0/1:26,0:5:6.53:7,0,71	0/0:36,0:3:9.03:0,9,242	0/0:20,0:20:19.81:0,20,623	0/1:24,0:23:55.54:56,0,246	0/1:23,0:23:6.88:7,0,320	0/1:18,0:17:6.23:6,0,568	0/0:14,0:13:22.27:0,22,363	0/1:33,0:32:42.94:43,0,826	0/0:7,0:7:1.74:0,2,70	0/0:12,0:12:6.49:0,6,155	0/0:10,0:10:26.38:0,26,524	0/0:4,0:4:6:0,6,97	0/1:35,0:35:61.21:61,0,426	0/1:11,12:23:32.89:345,0,33	0/0:19,0:19:11.71:0,12,660	0/1:10,0:10:7.05:7,0,388	0/0:11,0:10:27.53:0,28,420	0/0:8,0:8:8.67:0,9,167	0/0:21,0:20:36.07:0,36,637	0/0:13,0:12:1.96:0,2,23	0/0:5,0:5:5.36:0,5,96	0/0:7,0:7:12:0,12,243	0/0:21,0:21:7.90:0,8,108	0/1:36,0:36:56.10:56,0,1313	0/0:19,0:19:24.39:0,24,782	./.
chr10	47802108	.	GTGTGTGTATATATA	G	5578.09	PASS	AB=0.976;AC=30;AF=0.536;AN=56;BaseQRankSum=1.884;DP=423;FS=0.000;HRun=0;HaplotypeScore=186.0919;InbreedingCoeff=0.0203;MQ=47.00;MQ0=16;MQRankSum=-2.974;QD=15.54;ReadPosRankSum=1.329;VQSLOD=3.8280;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:13,15:28:0.47:3,0,0	1/1:9,4:13:8.94:215,9,0	0/1:17,0:4:1.64:2,0,43	0/0:25,0:3:5.92:0,6,40	0/1:17,0:17:7.64:87,0,8	1/1:12,9:20:18.06:603,18,0	1/1:13,7:20:13.21:250,13,0	0/1:17,0:14:13.64:14,0,544	0/1:9,0:8:86.36:86,0,124	1/1:33,0:32:62:1476,62,0	1/1:7,0:7:2.97:21,3,0	0/0:7,0:7:3.48:0,3,96	0/1:10,0:10:65.46:65,0,573	0/0:4,0:4:2.88:0,3,100	0/1:19,12:32:6.21:277,0,6	0/1:19,0:19:99:141,0,185	0/1:18,0:18:65.04:203,0,65	0/1:9,0:9:22.03:364,0,22	0/0:9,0:8:10.74:0,11,340	0/1:6,0:6:51.98:52,0,193	0/0:12,0:11:12.04:0,12,451	0/1:6,0:5:0:1,0,0	0/0:4,0:4:2.64:0,3,99	0/0:3,0:3:6.02:0,6,182	1/1:19,2:21:2.93:70,3,0	1/1:35,1:36:15.87:1536,16,0	0/1:16,0:16:42.72:43,0,804	1/1:2,0:1:3.01:68,3,0
chr10	47802110	.	GTGTGTATATATA	G	6577.28	PASS	AB=0.961;AC=30;AF=0.536;AN=56;BaseQRankSum=0.002;DP=400;FS=2.166;HRun=0;HaplotypeScore=168.6523;InbreedingCoeff=0.2652;MQ=47.00;MQ0=13;MQRankSum=-3.515;QD=21.22;ReadPosRankSum=0.110;VQSLOD=4.0075;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:28:0.46:3,0,0	1/1:12,0:12:6.49:132,6,0	0/1:16,0:4:1.81:2,0,42	0/0:19,0:2:2.94:0,3,18	1/1:11,6:17:15.05:224,15,0	1/1:20,1:20:17.93:489,18,0	1/1:17,0:17:9.05:167,9,0	0/0:17,0:14:4.88:0,5,546	0/1:8,0:7:23.82:24,0,137	1/1:25,8:32:86.30:2210,86,0	1/1:5,2:7:3.01:46,3,0	0/0:7,0:7:3.48:0,3,95	0/1:9,0:9:3.10:3,0,520	0/0:4,0:4:3:0,3,100	1/1:31,0:31:11.71:182,12,0	0/1:19,0:19:79.38:79,0,185	0/1:16,1:17:26.91:340,0,27	0/1:6,2:8:0.76:439,0,1	0/0:9,0:8:11.93:0,12,350	0/1:5,0:5:29.13:29,0,192	0/0:12,0:11:12.04:0,12,445	0/1:6,0:5:0:0,0,0	0/0:3,0:3:2.81:0,3,99	0/0:3,0:3:6.02:0,6,203	1/1:7,14:21:3.01:116,3,0	1/1:26,6:32:83.20:2024,83,0	0/0:15,0:15:1.12:0,1,783	1/1:2,0:1:3.01:68,3,0
chr10	47802114	.	GTATATATA	G	4139.41	PASS	AB=0.860;AC=25;AF=0.446;AN=56;BaseQRankSum=5.062;DP=387;FS=0.667;HRun=0;HaplotypeScore=159.0495;InbreedingCoeff=0.5558;MQ=46.82;MQ0=10;MQRankSum=-5.880;QD=16.04;ReadPosRankSum=3.657;VQSLOD=2.5311;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:21,6:28:0.62:1,0,1	1/1:5,6:11:3.01:67,3,0	0/0:14,0:4:3.47:0,3,48	0/0:16,0:4:4.19:0,4,21	0/1:12,4:16:0:0,0,0	1/1:14,6:19:14.93:305,15,0	1/1:9,6:15:4.61:111,5,0	0/0:22,0:19:45.07:0,45,995	0/0:7,0:6:6.02:0,6,179	1/1:17,12:30:75.09:1550,75,0	0/1:4,3:7:0.13:0,0,0	0/0:7,0:7:3.48:0,3,92	0/0:9,0:9:23.75:0,24,548	0/0:5,0:5:6.02:0,6,200	1/1:20,7:27:3.01:67,3,0	0/1:19,0:19:10.54:11,0,200	1/1:9,5:14:8.71:199,9,0	1/1:6,2:8:15.05:325,15,0	0/0:8,0:7:12.04:0,12,348	0/0:6,0:6:9.03:0,9,296	0/0:12,0:11:12.04:0,12,435	0/1:6,0:5:0:0,0,0	0/0:3,0:3:3.01:0,3,99	0/0:3,0:3:6.02:0,6,207	1/1:16,5:21:2.84:67,3,0	1/1:22,9:31:66.16:1368,66,0	0/0:15,0:15:26.48:0,26,755	1/1:3,1:1:3.01:68,3,0
chr10	47802149	.	T	TAC	4573.16	PASS	AB=0.559;AC=23;AF=0.411;AN=56;BaseQRankSum=12.250;DP=515;FS=44.469;HRun=0;HaplotypeScore=200.5697;InbreedingCoeff=0.8114;MQ=58.30;MQ0=3;MQRankSum=-12.250;QD=16.22;ReadPosRankSum=2.374;VQSLOD=2.9913;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:6,26:32:0.50:1,0,1	1/1:4,9:13:2.92:39,3,0	0/0:22,0:17:36.05:0,36,409	0/0:33,0:18:12.41:0,12,214	0/1:4,19:23:0:0,0,0	1/1:5,13:18:11.89:203,12,0	1/1:8,22:30:20.71:321,21,0	0/0:21,0:20:39.13:0,39,503	0/0:12,0:12:30.10:0,30,389	1/1:11,30:40:99:1707,108,0	0/1:3,8:11:0.20:0,0,0	0/0:8,0:8:12.04:0,12,156	0/0:15,0:15:14.71:0,15,414	0/0:9,0:9:27.05:0,27,308	1/1:10,19:29:8.62:116,9,0	0/0:14,0:14:24.06:0,24,297	1/1:4,9:13:6.02:96,6,0	1/1:1,11:12:29.69:467,30,0	0/0:9,0:8:24.08:0,24,311	0/0:16,0:16:41.96:0,42,531	0/0:14,0:14:36.10:0,36,452	0/0:8,0:8:15.03:0,15,181	0/0:18,0:18:48.09:0,48,568	0/0:7,0:7:21.07:0,21,273	1/1:6,17:23:2.92:51,3,0	1/1:8,26:34:90.24:1471,90,0	0/0:27,0:27:67.94:0,68,798	1/1:1,2:3:6.02:102,6,0
chr10	47802167	.	GAGACAGAGAC	G	6132.08	PASS	AB=0.593;AC=24;AF=0.429;AN=56;BaseQRankSum=11.738;DP=574;FS=40.470;HRun=0;HaplotypeScore=239.6720;InbreedingCoeff=0.8718;MQ=65.60;MQ0=11;MQRankSum=-10.241;QD=22.14;ReadPosRankSum=-1.528;VQSLOD=2.2220;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,14:27:17.18:223,17,0	1/1:5,7:12:14.67:88,15,0	0/0:36,0:27:34.25:0,34,940	0/0:57,0:30:27.90:0,28,692	0/1:5,15:20:0.03:0,0,1	1/1:8,12:20:11.64:91,12,0	1/1:14,14:28:8.27:499,8,0	0/0:18,0:18:30.08:0,30,896	0/0:14,0:14:42.14:0,42,2131	1/1:15,27:41:99:2330,103,0	0/1:6,10:16:0.23:0,0,1	0/0:12,0:12:24.08:0,24,1046	0/0:14,0:14:36.12:0,36,1579	0/0:10,0:10:30.10:0,30,1489	1/1:8,22:30:17.64:222,18,0	0/0:18,0:18:33.11:0,33,1534	1/1:7,7:14:0.47:1,0,0	1/1:7,4:11:20.96:403,21,0	0/0:9,0:8:21.07:0,21,684	0/0:18,0:18:52.42:0,52,2306	0/0:23,0:23:57.20:0,57,2812	0/0:9,0:9:27.09:0,27,1281	0/0:21,0:21:60.18:0,60,2366	0/0:9,0:9:27.05:0,27,1137	1/1:8,11:20:11.85:112,12,0	1/1:11,23:34:84.14:2069,84,0	0/0:27,0:27:75.26:0,75,3392	1/1:2,1:3:3.01:93,3,0
chr10	47802179	.	GAC	G	1113.66	PASS	AB=0.785;AC=11;AF=0.196;AN=56;BaseQRankSum=11.351;DP=605;FS=28.834;HRun=0;HaplotypeScore=184.7440;InbreedingCoeff=0.2826;MQ=69.42;MQ0=18;MQRankSum=-9.424;QD=7.52;ReadPosRankSum=3.795;VQSLOD=1.6177;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,5:29:20.05:0,20,192	0/1:9,2:11:0.53:1,0,131	0/0:50,0:31:57.48:0,57,1053	0/0:73,0:44:27.25:0,27,805	0/0:18,3:21:2.82:0,3,40	0/0:12,2:14:9.48:0,9,105	0/1:22,8:30:58.48:58,0,201	0/0:17,1:18:0.24:0,0,600	0/0:15,0:15:45.15:0,45,851	0/1:32,6:38:74.90:543,0,75	0/1:10,5:15:0.06:0,0,0	0/0:11,0:11:27.08:0,27,471	0/0:15,0:15:42.13:0,42,776	0/0:12,0:12:33.11:0,33,619	0/0:28,2:30:8.52:0,9,223	0/0:18,0:18:42.14:0,42,801	1/1:12,2:14:0.47:1,0,0	0/1:5,4:9:62.92:145,0,63	0/0:13,0:12:39.13:0,39,692	0/0:19,0:19:55.43:0,55,1024	0/0:28,0:28:72.25:0,72,1371	0/0:11,0:11:33.11:0,33,619	0/0:23,0:23:66.20:0,66,1222	0/0:11,0:12:30.99:0,31,564	0/0:16,3:19:20.71:0,21,198	1/1:23,6:29:3.99:470,4,0	0/0:25,0:25:75.26:0,75,1444	1/1:1,0:1:2.90:16,3,0
chr10	47802553	.	G	GA	3484.35	PASS	AB=0.962;AC=18;AF=0.321;AN=56;BaseQRankSum=7.107;DP=579;FS=3.222;HRun=7;HaplotypeScore=79.4300;InbreedingCoeff=0.8324;MQ=51.55;MQ0=15;MQRankSum=-10.475;QD=18.63;ReadPosRankSum=1.031;VQSLOD=3.5161;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:38:93.14:0,93,897	0/1:11,1:12:12.18:12,0,179	0/1:13,0:5:20.91:22,0,21	0/0:22,0:13:27.01:0,27,245	1/1:11,22:32:39.12:463,39,0	0/0:18,0:18:39.05:0,39,377	0/0:22,0:22:54.07:0,54,515	0/0:35,0:33:75.10:0,75,716	0/0:21,0:21:48.05:0,48,457	1/1:10,20:28:60.18:719,60,0	1/1:8,10:18:38.99:418,39,0	0/0:30,0:29:72.11:0,72,695	0/0:15,0:15:39.06:0,39,376	0/0:9,0:9:18.02:0,18,174	0/0:14,0:14:36.05:0,36,348	0/0:16,0:16:45.06:0,45,428	1/1:5,18:23:48.10:559,48,0	1/1:5,3:7:12.02:131,12,0	0/0:17,0:14:27.02:0,27,257	0/0:26,0:25:51.04:0,51,493	0/0:13,0:13:36.06:0,36,347	0/0:19,0:19:42.04:0,42,398	0/0:24,0:23:60.10:0,60,579	0/0:24,0:21:66.11:0,66,637	1/1:8,15:23:39.59:462,40,0	1/1:7,15:22:45.14:542,45,0	0/0:28,0:27:71.93:0,72,674	1/1:2,3:5:14.83:157,15,0
chr10	47802581	.	GA	G	4798.96	PASS	AB=0.635;AC=24;AF=0.429;AN=56;BaseQRankSum=13.740;DP=515;FS=12.358;HRun=8;HaplotypeScore=89.1074;InbreedingCoeff=0.8545;MQ=65.36;MQ0=3;MQRankSum=-10.458;QD=22.53;ReadPosRankSum=0.376;VQSLOD=4.2614;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,24:29:66.10:637,66,0	1/1:4,10:14:30.04:292,30,0	0/0:29,1:16:8.83:0,9,299	0/0:27,0:21:39.31:0,39,414	1/1:3,20:23:51.08:492,51,0	1/1:4,10:14:33.04:314,33,0	1/1:0,17:17:42.06:406,42,0	0/0:37,0:37:99:0,99,1152	0/0:17,0:17:48.15:0,48,578	1/1:5,14:18:45.06:435,45,0	1/1:2,14:16:39.06:376,39,0	0/0:23,0:23:63.19:0,63,751	0/0:10,0:10:30.09:0,30,362	0/0:11,0:11:30.09:0,30,361	1/1:1,9:10:27.04:261,27,0	0/0:17,0:17:51.14:0,51,604	1/1:3,17:20:42.07:410,42,0	0/1:3,2:5:9.34:52,0,9	0/0:14,0:14:39.12:0,39,470	0/0:20,0:20:57.17:0,57,688	0/0:15,0:15:39.12:0,39,469	0/0:14,0:14:39.10:0,39,457	0/0:21,0:21:63.18:0,63,745	0/0:22,0:21:54.12:0,54,636	1/1:4,13:17:42.05:400,42,0	1/1:3,21:24:63.11:620,63,0	0/0:23,0:23:54.17:0,54,651	0/1:1,4:5:17.39:103,0,17
chr10	47802630	.	G	GC	5002.96	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=9.130;DP=515;FS=35.426;HRun=0;HaplotypeScore=97.6070;InbreedingCoeff=0.9654;MQ=69.21;MQ0=11;MQRankSum=-2.907;QD=29.60;ReadPosRankSum=2.312;VQSLOD=2.9685;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,17:21:32.41:444,32,0	1/1:0,6:6:18.06:277,18,0	0/0:49,0:20:58.51:0,59,682	0/0:62,0:23:14.81:0,15,527	1/1:1,13:13:6.02:94,6,0	1/1:1,6:7:15.05:232,15,0	1/1:4,12:16:7.47:388,7,0	0/0:22,0:20:57.18:0,57,783	0/0:18,0:18:48.11:0,48,670	1/1:0,17:17:51.15:765,51,0	1/1:0,14:15:23.91:347,24,0	0/0:20,0:20:59.56:0,60,800	0/0:15,0:15:39.13:0,39,543	0/0:18,0:18:46.51:0,47,577	1/1:0,11:10:18.06:284,18,0	0/0:14,0:14:41.17:0,41,551	1/1:1,14:16:35.93:498,36,0	1/1:2,7:8:19.62:288,20,0	0/0:20,0:19:57.19:0,57,793	0/0:16,0:16:48.16:0,48,670	0/0:19,0:19:45.02:0,45,599	0/0:20,0:20:51.17:0,51,713	0/0:18,0:18:50.83:0,51,678	0/0:14,0:14:23.76:0,24,335	1/1:0,11:11:21.07:322,21,0	1/1:1,15:16:48.16:732,48,0	0/0:21,0:21:57.17:0,57,775	1/1:0,8:8:21.07:331,21,0
chr10	47802634	.	AAG	A	160.43	PASS	AB=0.960;AC=25;AF=0.568;AN=44;BaseQRankSum=2.802;DP=530;FS=4.330;HRun=0;HaplotypeScore=116.4459;InbreedingCoeff=0.3295;MQ=65.40;MQ0=12;MQRankSum=0.137;QD=0.69;ReadPosRankSum=-0.871;VQSLOD=1.8165;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:23:5.88:6,0,26	./.	./.	./.	./.	1/1:8,0:8:2.02:14,2,0	0/1:18,0:17:10.57:11,0,36	0/0:25,0:22:2.74:0,3,12	1/1:14,4:18:9.02:96,9,0	1/1:18,0:18:2.96:19,3,0	1/1:15,0:15:2.84:14,3,0	0/1:19,0:22:8.13:8,0,19	1/1:14,1:15:2.03:31,2,0	1/1:17,0:18:2.83:14,3,0	0/0:13,0:12:11.97:0,12,95	0/0:16,0:16:15.03:0,15,198	1/1:21,0:19:1.18:11,1,0	0/0:9,0:8:2.84:0,3,14	0/0:19,0:18:12.04:0,12,166	0/0:16,0:16:3.01:0,3,41	0/0:20,0:20:20.77:0,21,179	1/1:19,3:22:2.96:32,3,0	./.	1/1:12,0:15:2.42:14,2,0	1/1:12,0:12:3:25,3,0	./.	0/0:18,0:18:25.58:0,26,248	1/1:9,0:9:1.82:5,2,0
chr10	47803181	.	G	GTCTC	5000.40	PASS	AB=1.000;AC=34;AF=0.607;AN=56;BaseQRankSum=2.193;DP=618;FS=0.436;HRun=0;HaplotypeScore=115.3558;InbreedingCoeff=0.6319;MQ=52.84;MQ0=16;MQRankSum=-1.087;QD=14.45;ReadPosRankSum=-1.853;VQSLOD=4.3067;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,21:24:8.98:119,9,0	1/1:11,0:10:14.72:206,15,0	0/0:32,0:10:14.55:0,15,160	0/0:51,0:19:31.89:0,32,389	1/1:3,8:11:11.97:133,12,0	1/1:10,7:17:32.47:449,32,0	1/1:19,0:14:11.97:133,12,0	1/1:34,0:33:50.60:430,51,0	0/1:22,0:22:44.87:45,0,203	1/1:2,21:23:54.03:1029,54,0	1/1:1,9:11:17.97:202,18,0	0/0:25,0:25:19.88:0,20,357	0/1:17,0:17:6.41:6,0,160	0/0:18,0:18:25.73:0,26,532	1/1:21,3:24:44.80:502,45,0	1/1:22,0:21:15.99:128,16,0	1/1:3,18:22:5.95:92,6,0	1/1:7,0:7:18:254,18,0	0/0:21,0:19:38.20:0,38,394	0/0:27,0:27:75.90:0,76,1014	0/0:38,0:37:27.27:0,27,999	0/1:15,0:15:43.45:43,0,243	0/1:14,0:14:13.23:13,0,82	0/0:37,0:37:21.49:0,21,471	1/1:2,13:16:2.90:16,3,0	1/1:1,20:21:56.94:1123,57,0	0/0:23,0:23:46.42:0,46,699	1/1:1,13:14:3.01:76,3,0
chr10	47803191	.	T	TTC	1068.26	PASS	AB=0.943;AC=29;AF=0.580;AN=50;BaseQRankSum=4.540;DP=589;FS=4.647;HRun=0;HaplotypeScore=119.7928;InbreedingCoeff=0.2848;MQ=50.38;MQ0=14;MQRankSum=-0.872;QD=2.91;ReadPosRankSum=-1.118;VQSLOD=1.9698;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:20:2.96:19,3,0	1/1:6,0:10:2.60:12,3,0	0/1:21,0:6:0.65:1,0,20	0/0:39,0:11:5.73:0,6,43	./.	1/1:18,0:18:5.95:44,6,0	0/0:18,0:13:0.01:0,0,1	0/1:26,0:25:15.37:15,0,40	0/1:23,0:24:19.71:94,0,20	1/1:21,0:20:23.45:225,23,0	./.	0/1:26,0:26:15.18:76,0,15	0/1:8,10:18:21.50:98,0,22	0/0:24,0:24:27.55:0,28,367	0/1:25,0:25:2.51:3,0,6	1/1:24,0:23:6.15:33,6,0	1/1:21,0:21:5.18:26,5,0	1/1:6,0:6:3.31:15,3,0	0/0:18,0:16:29.68:0,30,259	0/0:28,0:30:61.89:0,62,533	0/0:36,0:38:34.65:0,35,552	1/1:17,0:17:19.69:148,20,0	1/1:15,0:15:2.99:26,3,0	0/1:38,0:38:53.65:76,0,54	./.	1/1:21,0:21:35.93:294,36,0	0/0:24,0:24:34.28:0,34,349	1/1:12,0:12:2.99:23,3,0
chr10	47803210	.	T	TCTCA	3503.96	PASS	AB=0.871;AC=40;AF=0.714;AN=56;BaseQRankSum=3.008;DP=609;FS=13.013;HRun=0;HaplotypeScore=144.8386;InbreedingCoeff=0.1351;MQ=48.89;MQ0=11;MQRankSum=-1.803;QD=6.27;ReadPosRankSum=-4.492;VQSLOD=0.4278;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:24:11.89:87,12,0	1/1:11,0:10:8.62:55,9,0	0/1:16,0:3:0.65:1,0,20	0/0:25,0:6:5.95:0,6,43	0/0:11,0:11:0:0,0,0	1/1:12,0:24:8.88:61,9,0	1/1:23,0:18:16.89:150,17,0	0/1:27,0:26:0.54:294,0,1	0/1:9,1:25:0.76:253,0,1	1/1:23,0:19:31.06:273,31,0	1/1:9,0:8:2.99:24,3,0	0/1:4,21:27:35.96:85,0,36	1/1:22,0:22:9.92:317,10,0	0/1:20,0:20:19.64:20,0,253	1/1:16,0:29:8.15:75,8,0	1/1:26,0:25:26.96:205,27,0	1/1:23,0:23:21.37:193,21,0	1/1:6,0:6:15.11:170,15,0	0/0:14,0:13:21.78:0,22,180	0/1:37,0:37:96.67:97,0,416	0/1:47,0:46:99:218,0,509	1/1:18,0:18:15.71:267,16,0	1/1:2,1:18:0.03:1,0,0	0/1:8,26:39:67.82:214,0,68	0/1:12,0:12:0:0,0,0	1/1:25,0:24:51.21:404,51,0	0/1:22,0:22:17.61:18,0,289	1/1:3,0:3:2.99:23,3,0
chr10	47804069	.	CAA	C	2207.65	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-4.927;DP=546;FS=7.903;HRun=14;HaplotypeScore=124.2362;InbreedingCoeff=0.9294;MQ=56.25;MQ0=4;MQRankSum=5.394;QD=16.35;ReadPosRankSum=7.044;VQSLOD=1.8350;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:36.50:0,37,481	0/0:10,0:11:24:0,24,214	0/0:16,0:6:7.92:0,8,56	0/0:21,0:5:7.25:0,7,37	0/0:30,0:32:39.36:0,39,319	0/0:16,0:18:28.85:0,29,330	0/0:17,0:18:25.95:0,26,220	1/1:4,12:17:26.41:290,26,0	1/1:6,14:20:34.68:353,35,0	0/0:28,0:29:59.30:0,59,478	0/0:19,0:19:8.64:0,9,128	1/1:2,11:12:36.04:333,36,0	1/1:2,7:9:14.97:139,15,0	0/0:13,1:16:13.38:0,13,425	0/0:12,0:12:23.42:0,23,205	1/1:4,10:16:31.57:319,32,0	0/0:21,0:20:33.81:0,34,253	0/0:10,0:10:12.62:0,13,140	0/0:11,0:11:10.99:0,11,83	0/0:22,1:27:43.48:0,43,762	0/0:19,0:22:38.08:0,38,447	1/1:5,11:16:6.57:225,7,0	1/1:6,12:22:44.21:367,44,0	1/1:2,19:22:44.45:384,44,0	0/0:25,0:24:34.90:0,35,347	0/0:26,0:25:59.32:0,59,544	0/0:15,0:16:41.55:0,42,505	0/0:18,0:17:26.87:0,27,197
chr10	47804078	.	A	AAAAAAAG	6360.84	PASS	AB=0.917;AC=25;AF=0.446;AN=56;BaseQRankSum=4.670;DP=583;FS=8.885;HRun=0;HaplotypeScore=188.5672;InbreedingCoeff=0.9118;MQ=55.11;MQ0=8;MQRankSum=-12.073;QD=23.56;ReadPosRankSum=-1.512;VQSLOD=3.2412;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:38,1:43:84.40:1105,84,0	1/1:10,1:11:14.94:334,15,0	0/0:25,0:5:8.40:0,8,51	0/0:34,0:6:4.17:0,4,18	1/1:33,0:32:27.57:425,28,0	1/1:13,4:17:44.33:694,44,0	1/1:15,0:15:29.67:372,30,0	0/0:21,0:21:26.09:0,26,510	0/0:20,0:20:52.98:0,53,706	1/1:26,0:26:69.05:658,69,0	1/1:17,0:17:23.45:282,23,0	0/0:19,0:18:51.11:0,51,702	0/0:10,0:10:23.98:0,24,317	0/0:18,0:18:48.01:0,48,580	1/1:7,2:10:26.92:511,27,0	0/0:17,0:17:51.15:0,51,787	1/1:20,0:20:30.13:371,30,0	1/1:10,0:10:21.96:258,22,0	0/0:11,0:10:24.03:0,24,347	0/0:32,0:32:86.88:0,87,1241	0/0:20,0:20:50.88:0,51,834	0/0:17,0:17:31.50:0,31,498	0/0:25,0:25:62.59:0,63,862	0/0:24,0:24:50.94:0,51,806	0/1:20,0:21:5.07:466,0,5	1/1:26,0:25:24.17:285,24,0	0/0:20,0:20:53.87:0,54,719	1/1:19,0:18:30.87:600,31,0
chr10	47804104	.	G	GGA	911.68	PASS	AB=0.945;AC=13;AF=0.232;AN=56;BaseQRankSum=9.606;DP=594;FS=21.019;HRun=0;HaplotypeScore=149.4432;InbreedingCoeff=-0.2176;MQ=49.61;MQ0=14;MQRankSum=-8.598;QD=3.17;ReadPosRankSum=-1.731;VQSLOD=1.3329;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:33,1:34:77.90:78,0,394	0/1:8,1:9:48.71:83,0,49	0/1:33,0:6:8.33:8,0,79	0/1:38,0:6:12.10:12,0,66	0/1:25,1:26:68.12:68,0,107	0/0:16,0:16:15.05:0,15,183	0/1:17,2:19:78.47:78,0,113	0/0:28,0:26:68.73:0,69,1020	0/0:20,0:20:54.17:0,54,845	0/1:25,1:26:99:114,0,310	0/1:17,1:19:99:113,0,106	0/0:16,0:16:48.16:0,48,769	0/0:11,0:11:27.09:0,27,438	0/0:18,0:18:51.14:0,51,781	0/1:10,1:11:3.57:47,0,4	0/0:19,0:19:57.19:0,57,903	0/1:26,0:25:41.78:42,0,253	0/1:12,0:12:33.89:34,0,111	0/0:14,0:11:30.10:0,30,465	0/0:34,0:34:99:0,102,1504	0/0:16,0:16:45.11:0,45,703	0/0:16,0:16:48.15:0,48,748	0/0:29,0:29:84.20:0,84,1254	0/0:21,0:21:54.14:0,54,826	0/1:19,1:19:99:126,0,130	0/0:32,0:30:2.13:0,2,418	0/0:16,0:16:48.16:0,48,761	0/1:9,4:13:4.48:260,0,4
chr10	47804119	.	AAAGAAAAAAGAAAAG	A	11564.92	PASS	AB=0.611;AC=23;AF=0.411;AN=56;BaseQRankSum=12.240;DP=587;FS=0.406;HRun=0;HaplotypeScore=219.0453;InbreedingCoeff=0.7760;MQ=52.20;MQ0=11;MQRankSum=-8.845;QD=42.52;ReadPosRankSum=1.820;VQSLOD=4.2256;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,29:35:38.10:1359,38,0	1/1:5,10:14:17.60:542,18,0	0/0:27,0:9:24.55:0,25,521	0/0:38,0:9:16.82:0,17,530	1/1:6,23:29:26.32:862,26,0	1/1:1,13:14:21.07:920,21,0	1/1:3,16:19:17.10:1036,17,0	0/0:28,0:26:67.67:0,68,2332	0/0:17,0:17:45.14:0,45,2708	1/1:4,21:25:57.65:1744,58,0	1/1:5,12:17:9.80:860,10,0	0/0:15,0:15:45.15:0,45,2546	0/0:14,0:14:39.13:0,39,2089	0/0:19,0:19:48.16:0,48,2700	1/1:4,7:11:17.64:478,18,0	0/0:19,0:19:57.19:0,57,2663	0/1:13,15:27:92.87:378,0,93	0/1:4,8:12:55.33:391,0,55	0/0:16,0:12:33.11:0,33,1514	0/0:30,0:30:90.26:0,90,5207	0/0:12,0:12:33.11:0,33,1976	0/0:19,0:19:57.19:0,57,3440	0/0:28,0:28:81.27:0,81,4456	0/0:18,0:18:42.14:0,42,2767	0/1:6,15:21:2.60:687,0,3	1/1:7,27:32:47.38:1993,47,0	0/0:14,0:14:42.14:0,42,2677	1/1:5,7:12:5.80:316,6,0
chr10	47804125	.	A	AG	301.07	PASS	AB=0.901;AC=5;AF=0.089;AN=56;BaseQRankSum=2.454;DP=566;FS=44.375;HRun=0;HaplotypeScore=133.4589;InbreedingCoeff=0.2845;MQ=58.77;MQ0=9;MQRankSum=-1.864;QD=3.20;ReadPosRankSum=-2.405;VQSLOD=1.3279;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:35.06:0,35,158	0/0:15,0:14:12.93:0,13,61	0/0:23,0:11:10.35:0,10,288	0/1:37,0:13:4.62:5,0,168	0/0:28,1:29:3.67:0,4,60	0/0:13,0:13:16:0,16,54	0/0:17,0:17:21.28:0,21,74	0/0:29,0:27:69.15:0,69,919	0/0:18,0:18:51.14:0,51,664	0/0:23,0:23:10.81:0,11,105	0/1:12,2:14:57.81:64,0,58	0/0:17,0:17:51.12:0,51,675	0/0:15,0:15:39.13:0,39,545	0/0:16,0:16:48.15:0,48,656	0/0:10,1:11:15.59:0,16,84	1/1:19,0:18:12.37:194,12,0	0/1:19,5:23:22.69:152,0,23	0/0:10,1:11:12.68:0,13,89	0/0:19,0:15:42.12:0,42,545	0/0:31,0:31:93.25:0,93,1233	0/0:13,0:13:36.11:0,36,488	0/0:20,0:20:54.18:0,54,754	0/0:29,0:29:87.28:0,87,1185	0/0:18,0:18:45.14:0,45,612	0/0:18,0:18:18.02:0,18,84	0/0:28,0:27:47.25:0,47,190	0/0:14,0:14:42.14:0,42,586	0/0:12,0:12:12.70:0,13,66
chr10	47804259	.	ATG	A	1436.04	PASS	AB=0.868;AC=20;AF=0.385;AN=52;BaseQRankSum=-0.369;DP=678;FS=0.000;HRun=0;HaplotypeScore=118.2752;InbreedingCoeff=0.4877;MQ=59.67;MQ0=14;MQRankSum=1.121;QD=4.56;ReadPosRankSum=1.609;VQSLOD=2.6783;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:36,1:37:14.97:15,0,515	1/1:8,2:10:17.98:167,18,0	./.	0/0:46,0:30:1.82:0,2,5	0/0:23,0:28:31.04:0,31,246	0/1:18,0:19:2.21:2,0,122	1/1:21,3:23:9.27:105,9,0	./.	0/1:12,12:25:13.58:230,0,14	0/0:26,0:28:26.87:0,27,246	0/0:16,0:19:21.02:0,21,225	0/1:14,9:23:5.01:146,0,5	1/1:16,6:22:12.03:131,12,0	0/0:14,0:14:15.05:0,15,207	1/1:17,5:23:23.87:226,24,0	0/0:12,0:12:24.07:0,24,325	0/0:19,0:23:38.91:0,39,358	0/0:9,0:12:14.90:0,15,117	0/1:17,2:19:17.07:17,0,162	0/0:12,2:13:18.04:0,18,247	0/1:49,0:49:9.80:10,0,389	1/1:12,8:22:17.88:178,18,0	1/1:12,4:15:18.03:187,18,0	1/1:14,10:26:6.78:204,7,0	0/0:9,0:18:17.03:0,17,137	0/0:27,0:29:37.13:0,37,332	0/0:21,0:21:27.05:0,27,356	0/0:4,0:7:3:0,3,26
chr10	47804378	.	ATG	A	10969.44	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=15.909;DP=913;FS=9.733;HRun=0;HaplotypeScore=128.0558;InbreedingCoeff=0.9999;MQ=58.86;MQ0=1;MQRankSum=0.715;QD=30.64;ReadPosRankSum=3.895;VQSLOD=6.7903;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,35:42:84.04:1091,84,0	1/1:1,12:13:36.12:468,36,0	0/0:54,1:43:35.45:0,35,1022	0/0:50,0:39:70.92:0,71,1085	1/1:1,25:26:63.16:800,63,0	1/1:2,35:37:84.27:1092,84,0	1/1:5,19:24:51.17:663,51,0	0/0:54,0:54:99:0,135,2223	0/0:31,0:31:87.28:0,87,1439	1/1:4,39:43:99:1507,117,0	1/1:2,16:18:48.16:623,48,0	0/0:36,0:36:99:0,102,1734	0/0:30,0:30:78.27:0,78,1310	0/0:29,0:29:75.26:0,75,1272	1/1:1,28:29:57.19:741,57,0	0/0:31,0:31:90.29:0,90,1483	1/1:2,34:36:84.27:1092,84,0	1/1:1,20:21:51.17:663,51,0	0/0:21,0:21:54.18:0,54,898	0/0:35,0:35:93.23:0,93,1492	0/0:73,0:73:99:0,178,2837	0/0:23,0:23:63.22:0,63,1062	0/0:26,0:26:69.23:0,69,1151	0/0:41,0:41:99:0,108,1768	1/1:2,14:16:39.13:507,39,0	1/1:4,33:37:96.28:1214,96,0	0/0:19,0:19:45.15:0,45,754	1/1:0,16:16:39.13:507,39,0
chr10	47805055	.	CAGAGCT	C	1056.78	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.669;DP=645;FS=2.048;HRun=0;HaplotypeScore=127.1248;InbreedingCoeff=0.9737;MQ=77.10;MQ0=0;MQRankSum=-6.201;QD=35.23;ReadPosRankSum=-0.309;VQSLOD=3.3211;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,27:30:48.16:1152,48,0	0/0:14,0:14:42.14:0,42,1492	0/0:15,0:15:36.12:0,36,1274	0/0:15,0:15:13.38:0,13,1256	0/0:30,0:30:90.31:0,90,3017	0/0:32,0:32:93.32:0,93,3283	0/0:20,0:20:54.19:0,54,1881	0/0:23,0:23:63.22:0,63,2215	0/0:16,0:16:48.16:0,48,1717	0/0:25,0:25:72.24:0,72,2459	0/0:15,0:15:42.14:0,42,1490	0/0:23,0:23:69.20:0,69,2226	0/0:27,0:27:78.27:0,78,2753	0/0:21,0:21:60.21:0,60,2163	0/0:22,0:22:66.23:0,66,2363	0/0:25,0:25:69.24:0,69,2406	0/0:47,0:47:99:0,132,4626	0/0:24,0:24:72.25:0,72,2574	0/0:29,0:29:85.17:0,85,2943	0/0:23,0:23:66.23:0,66,2324	0/0:31,0:31:87.30:0,87,3025	0/0:25,0:25:72.25:0,72,2595	0/0:23,0:23:63.22:0,63,2271	0/0:20,0:20:57.20:0,57,1981	0/0:16,0:16:48.16:0,48,1637	0/0:22,0:22:66.22:0,66,2234	0/0:25,0:25:75.26:0,75,2670	0/0:7,0:7:21.07:0,21,757
chr10	47805989	.	T	TG	4028.59	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=16.426;DP=461;FS=0.391;HRun=2;HaplotypeScore=100.6494;InbreedingCoeff=0.9393;MQ=76.80;MQ0=0;MQRankSum=-15.326;QD=23.70;ReadPosRankSum=0.199;VQSLOD=3.3617;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,11:16:33.02:301,33,0	1/1:1,2:3:6.01:55,6,0	0/0:16,0:16:32.68:0,33,368	0/0:11,0:11:0.69:0,1,245	1/1:3,13:16:41.03:367,41,0	1/1:0,11:11:33.04:313,33,0	1/1:3,16:19:45.05:422,45,0	0/0:31,0:31:81.25:0,81,995	0/0:18,0:18:48.13:0,48,582	1/1:5,17:22:53.80:557,54,0	1/1:1,8:9:26.68:221,27,0	0/0:13,0:13:33.10:0,33,408	0/0:11,0:11:33.10:0,33,409	0/0:18,0:18:51.15:0,51,620	1/1:3,14:17:39.01:350,39,0	0/0:19,0:19:54.16:0,54,657	1/1:0,5:5:12.02:126,12,0	1/1:3,3:5:12.03:129,12,0	0/0:25,0:25:72.23:0,72,893	0/0:23,0:23:66.21:0,66,818	0/0:16,0:16:42.13:0,42,520	0/0:14,0:14:42.13:0,42,521	0/0:29,0:29:81.25:0,81,1004	0/0:25,0:25:72.23:0,72,893	1/1:1,15:16:47.99:441,48,0	1/1:2,21:23:60.16:640,60,0	0/0:22,0:22:57.18:0,57,707	1/1:4,3:7:11.86:106,12,0
chr10	47805994	.	ACATCCC	A	8145.21	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=16.014;DP=424;FS=0.000;HRun=0;HaplotypeScore=124.0837;InbreedingCoeff=0.9647;MQ=75.97;MQ0=0;MQRankSum=-15.844;QD=56.56;ReadPosRankSum=1.130;VQSLOD=5.0844;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,11:11:30.10:596,30,0	1/1:0,2:2:6.02:120,6,0	0/0:14,0:14:39.08:0,39,1238	0/0:11,0:10:30.09:0,30,871	1/1:1,13:14:36.11:690,36,0	1/1:0,11:11:33.11:674,33,0	1/1:1,14:15:45.15:885,45,0	0/0:29,0:29:87.25:0,87,2853	0/0:17,0:17:48.16:0,48,1707	1/1:1,17:18:54.17:1100,54,0	1/1:1,8:9:27.09:508,27,0	0/0:10,0:10:27.09:0,27,990	0/0:11,0:11:33.11:0,33,1182	0/0:17,0:17:48.16:0,48,1758	1/1:1,13:14:39.13:777,39,0	0/0:17,0:17:51.18:0,51,1866	1/1:1,3:4:8.96:182,9,0	1/1:2,3:4:9.01:189,9,0	0/0:26,0:26:75.26:0,75,2673	0/0:24,0:24:72.25:0,72,2627	0/0:13,0:13:39.13:0,39,1429	0/0:17,0:17:48.14:0,48,1516	0/0:27,0:27:75.26:0,75,2743	0/0:25,0:25:72.20:0,72,2534	1/1:1,14:15:45.14:860,45,0	1/1:1,19:22:66.22:1312,66,0	0/0:22,0:22:60.21:0,60,2197	1/1:0,4:4:12.04:253,12,0
chr10	47806069	.	CTT	C	2593.13	PASS	AB=0.625;AC=25;AF=0.446;AN=56;BaseQRankSum=1.399;DP=449;FS=19.276;HRun=14;HaplotypeScore=85.1131;InbreedingCoeff=0.8505;MQ=64.41;MQ0=4;MQRankSum=-1.617;QD=14.41;ReadPosRankSum=3.906;VQSLOD=0.9564;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:25:45.21:0,45,208	1/1:1,6:7:11.79:131,12,0	0/0:15,0:4:3:0,3,27	0/0:12,0:8:4.82:0,5,31	1/1:7,10:17:16.41:164,16,0	1/1:1,15:16:47.73:427,48,0	1/1:1,12:14:20.61:178,21,0	0/0:9,0:32:68.18:0,68,626	0/0:4,0:16:27.93:0,28,107	1/1:3,11:15:32.55:289,33,0	1/1:3,14:19:23.56:253,24,0	0/0:5,0:17:25.92:0,26,114	0/1:4,1:10:7.42:7,0,40	0/0:13,0:13:33.05:0,33,414	1/1:4,6:10:14.95:139,15,0	0/0:6,0:14:17.78:0,18,160	1/1:1,10:12:29.71:277,30,0	1/1:2,9:12:1.45:131,1,0	0/0:17,0:19:47.27:0,47,534	0/0:26,0:31:74.55:0,75,874	0/0:9,0:10:18.05:0,18,224	0/0:3,0:17:33.29:0,33,156	0/0:6,0:15:26.84:0,27,103	0/0:7,0:14:17.87:0,18,67	1/1:2,12:15:26.71:295,27,0	1/1:7,15:24:26.57:343,27,0	0/0:15,0:16:38.59:0,39,465	1/1:1,7:9:14.76:176,15,0
chr10	47806283	.	TAC	T	2575.30	PASS	AB=1.000;AC=14;AF=0.259;AN=54;BaseQRankSum=0.532;DP=641;FS=0.000;HRun=0;HaplotypeScore=111.6950;InbreedingCoeff=0.7374;MQ=57.68;MQ0=12;MQRankSum=3.795;QD=14.55;ReadPosRankSum=4.883;VQSLOD=3.5369;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:39:44.99:0,45,393	0/0:3,0:6:5.98:0,6,48	0/0:22,0:10:6.02:0,6,91	./.	0/0:12,0:16:5.88:0,6,36	0/0:8,0:23:6.74:0,7,75	0/0:12,0:24:17.36:0,17,150	0/0:21,0:25:35.84:0,36,331	1/1:5,18:24:50.78:547,51,0	0/1:10,0:18:4.14:4,0,213	0/0:8,0:10:4.86:0,5,33	1/1:5,14:20:38.95:429,39,0	1/1:9,19:31:62.64:650,63,0	0/0:21,2:23:13.36:0,13,630	0/0:10,0:31:28.97:0,29,255	0/0:8,0:34:50.82:0,51,447	0/0:25,0:31:16.52:0,17,215	0/0:18,0:22:8.87:0,9,67	0/0:15,0:14:29.21:0,29,391	0/0:21,0:21:53.82:0,54,779	0/0:32,3:33:25.67:0,26,841	1/1:3,15:18:44.99:486,45,0	1/1:7,12:19:18.05:208,18,0	1/1:6,19:26:38.95:430,39,0	0/0:9,0:23:11.59:0,12,79	0/1:21,0:20:1.51:2,0,144	0/0:21,0:21:35.61:0,36,439	0/0:4,0:8:6:0,6,52
chr10	47806694	.	GAC	G	6480.89	PASS	AB=0.907;AC=32;AF=0.571;AN=56;BaseQRankSum=7.781;DP=548;FS=0.000;HRun=0;HaplotypeScore=94.1751;InbreedingCoeff=0.5398;MQ=60.17;MQ0=5;MQRankSum=-1.818;QD=17.52;ReadPosRankSum=2.478;VQSLOD=4.3845;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,14:22:35.14:404,35,0	1/1:1,9:12:32.72:337,33,0	0/0:37,0:19:32.82:0,33,411	0/0:27,0:10:16.08:0,16,201	1/1:6,21:27:50.74:589,51,0	1/1:3,16:19:42.04:472,42,0	1/1:10,17:27:0.73:461,1,0	0/0:25,0:25:45.14:0,45,681	0/1:9,1:10:12.11:12,0,313	1/1:2,23:24:60.16:724,60,0	1/1:3,15:18:30.09:362,30,0	0/0:8,0:8:21.07:0,21,337	0/0:11,0:11:27.07:0,27,408	0/0:17,0:17:36.12:0,36,578	1/1:5,16:22:50.99:593,51,0	0/0:4,0:21:41.99:0,42,369	1/1:6,11:17:30.09:362,30,0	1/1:6,12:18:33.10:398,33,0	0/1:17,1:18:9.11:9,0,337	0/1:17,2:19:24.26:24,0,598	0/1:20,2:22:27.22:27,0,557	0/0:10,0:10:21.07:0,21,337	0/1:16,2:18:21.15:21,0,672	0/0:22,0:20:25.26:0,25,655	1/1:2,23:25:66.12:763,66,0	1/1:11,12:23:16.48:522,16,0	0/1:11,2:13:39.28:39,0,401	1/1:4,10:14:30.09:362,30,0
chr10	47806741	.	A	AT	7719.06	PASS	AB=0.976;AC=43;AF=0.768;AN=56;BaseQRankSum=1.386;DP=528;FS=16.469;HRun=8;HaplotypeScore=93.0490;InbreedingCoeff=0.8209;MQ=65.79;MQ0=16;MQRankSum=-4.583;QD=20.05;ReadPosRankSum=1.210;VQSLOD=3.5978;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,8:16:35.58:353,36,0	1/1:1,11:12:30.09:344,30,0	0/1:78,2:28:19.33:19,0,141	0/0:69,0:20:8.63:0,9,76	1/1:8,14:22:43.67:481,44,0	1/1:6,13:18:23.38:498,23,0	1/1:2,11:14:39.10:437,39,0	1/1:9,36:44:99:1109,99,0	1/1:2,5:7:15.04:173,15,0	1/1:2,10:12:33.10:377,33,0	1/1:7,12:19:46.68:511,47,0	1/1:2,4:7:17.99:190,18,0	1/1:3,5:8:15.04:173,15,0	0/0:8,0:8:12:0,12,109	1/1:4,5:9:15.03:161,15,0	1/1:6,5:11:22.88:247,23,0	1/1:4,9:13:33.08:362,33,0	1/1:5,8:12:30.09:345,30,0	0/0:22,0:21:51.34:0,51,454	0/0:17,0:17:35.93:0,36,312	0/0:14,0:12:21.48:0,21,192	1/1:2,2:4:3.01:35,3,0	1/1:4,9:13:27.08:311,27,0	1/1:1,4:5:6.02:69,6,0	1/1:6,13:18:47.73:523,48,0	1/1:3,17:19:51.15:587,51,0	0/0:11,0:11:28.26:0,28,250	1/1:4,10:14:38.77:413,39,0
chr10	47806764	.	CTT	C	980.81	PASS	AB=0.743;AC=26;AF=0.464;AN=56;BaseQRankSum=3.314;DP=473;FS=0.651;HRun=16;HaplotypeScore=91.6809;InbreedingCoeff=0.6280;MQ=49.09;MQ0=37;MQRankSum=-4.259;QD=4.76;ReadPosRankSum=2.494;VQSLOD=-0.2598;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:14,5:18:23.73:160,24,0	1/1:6,5:11:8.81:75,9,0	0/0:72,0:17:19.12:0,19,145	0/0:63,0:14:6.88:0,7,64	1/1:13,4:19:6.59:78,7,0	1/1:6,5:12:14.50:112,14,0	0/1:4,3:10:17.79:35,0,18	0/0:29,1:33:3.76:0,4,109	0/0:9,0:10:14.88:0,15,168	1/1:9,2:11:5.67:50,6,0	1/1:11,2:13:10.22:79,10,0	0/0:6,0:5:6.01:0,6,66	0/0:6,0:5:3.01:0,3,39	0/0:9,0:9:8.97:0,9,94	1/1:5,4:8:8.96:72,9,0	0/0:8,0:9:14.86:0,15,129	1/1:10,9:19:17.91:163,18,0	1/1:9,3:8:11.44:85,11,0	0/0:14,0:14:8.33:0,8,139	0/1:12,0:13:3.45:3,0,153	0/0:9,0:7:12.01:0,12,129	0/0:3,0:2:3.01:0,3,35	0/0:9,0:7:6:0,6,63	0/0:6,0:4:0:0,0,0	1/1:11,3:14:4.10:34,4,0	1/1:17,5:22:9:107,9,0	0/0:7,0:9:14.40:0,14,145	1/1:10,3:11:14.91:120,15,0
chr10	47806868	.	TA	T	4080.32	PASS	AC=30;AF=0.577;AN=52;BaseQRankSum=6.631;DP=455;FS=7.971;HRun=11;HaplotypeScore=59.9917;InbreedingCoeff=0.8945;MQ=67.17;MQ0=11;MQRankSum=0.438;QD=15.94;ReadPosRankSum=4.218;VQSLOD=4.1706;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,16:20:29.95:246,30,0	1/1:3,10:13:26.87:209,27,0	0/0:56,1:18:1.83:0,2,105	0/0:52,0:15:9.13:0,9,82	1/1:3,15:18:41.85:337,42,0	1/1:6,11:17:23.96:197,24,0	1/1:2,8:10:17.98:148,18,0	1/1:3,28:31:80.83:655,81,0	0/0:7,0:7:15.02:0,15,151	1/1:2,13:15:35.93:291,36,0	1/1:2,11:13:29.87:233,30,0	0/0:12,0:12:24.01:0,24,231	./.	0/0:6,0:6:9.02:0,9,95	1/1:7,2:9:2.96:25,3,0	1/1:5,6:11:17.96:148,18,0	1/1:5,24:29:47.91:390,48,0	1/1:0,17:17:32.95:270,33,0	0/0:9,0:9:20.88:0,21,183	0/0:14,1:15:5.45:0,5,255	0/0:5,0:5:15.03:0,15,152	./.	0/0:7,0:7:21.02:0,21,201	0/0:5,0:5:15.04:0,15,157	1/1:4,12:16:35.94:295,36,0	1/1:7,19:27:56.63:441,57,0	0/0:18,0:18:39.10:0,39,413	1/1:2,8:10:23.97:197,24,0
chr10	47808663	.	A	AGG	8196.28	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-8.794;DP=648;FS=3.423;HRun=8;HaplotypeScore=91.2184;InbreedingCoeff=0.9895;MQ=82.88;MQ0=1;MQRankSum=-2.746;QD=25.53;ReadPosRankSum=0.014;VQSLOD=4.5058;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:14,19:33:36.12:564,36,0	1/1:1,5:8:17.55:246,18,0	0/0:20,0:20:38.92:0,39,415	0/0:17,0:17:36.05:0,36,431	1/1:13,16:29:42.10:638,42,0	1/1:4,12:18:32.60:485,33,0	1/1:6,22:30:68.21:1017,68,0	1/1:9,3:21:33.04:375,33,0	0/0:29,0:29:75.12:0,75,798	1/1:6,10:17:32.60:483,33,0	1/1:6,9:15:18.06:286,18,0	0/0:40,0:40:99:0,105,1170	0/0:18,0:18:45.11:0,45,501	0/0:27,0:27:78.19:0,78,860	1/1:2,25:27:69.24:1095,69,0	1/1:7,0:23:9.49:104,9,0	1/1:5,27:32:60.20:951,60,0	1/1:2,17:19:42.14:667,42,0	0/0:20,0:20:51.11:0,51,560	0/0:17,0:17:42.08:0,42,465	0/0:28,0:28:69.14:0,69,756	0/0:32,0:33:86.95:0,87,939	0/0:20,0:20:44.98:0,45,475	0/0:25,0:25:72.18:0,72,802	1/1:2,14:16:30.10:476,30,0	1/1:12,11:23:30.10:476,30,0	0/0:33,0:33:93.21:0,93,1025	1/1:1,8:9:21.07:333,21,0
chr10	47809001	.	CTG	C	788.77	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.962;DP=731;FS=2.950;HRun=0;HaplotypeScore=85.7573;InbreedingCoeff=0.9978;MQ=90.71;MQ0=0;MQRankSum=-2.838;QD=34.29;ReadPosRankSum=-0.226;VQSLOD=5.7198;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,102,1899	0/0:9,0:9:24.08:0,24,449	0/0:27,0:27:73.71:0,74,1355	0/0:33,1:33:93.20:0,93,1665	0/0:25,0:25:69.22:0,69,1252	0/0:22,0:22:63.22:0,63,1180	0/0:36,0:36:99:0,105,1956	0/0:27,0:27:75.26:0,75,1405	0/0:31,0:31:93.31:0,93,1710	0/0:28,0:28:84.27:0,84,1490	0/0:16,0:16:48.16:0,48,898	0/0:29,0:29:84.29:0,84,1553	0/0:25,0:25:75.26:0,75,1405	0/0:32,0:32:90.28:0,90,1621	0/0:35,0:35:99:0,105,1935	1/1:1,22:23:60.20:884,60,0	0/0:31,0:31:84.29:0,84,1573	0/0:38,0:38:99:0,108,1991	0/0:22,0:22:66.22:0,66,1192	0/0:12,0:12:36.12:0,36,671	0/0:37,0:37:99:0,108,2021	0/0:22,0:22:63.20:0,63,1139	0/0:18,0:18:51.17:0,51,955	0/0:27,0:27:81.28:0,81,1516	0/0:17,0:17:51.16:0,51,924	0/0:31,0:31:90.31:0,90,1681	0/0:27,0:27:75.26:0,75,1404	0/0:15,0:15:45.15:0,45,843
chr10	47809498	.	GTGTGTGTA	G	723.46	PASS	AB=1.000;AC=15;AF=0.313;AN=48;BaseQRankSum=2.382;DP=487;FS=5.124;HRun=0;HaplotypeScore=106.6789;InbreedingCoeff=0.2993;MQ=45.95;MQ0=26;MQRankSum=-4.590;QD=4.33;ReadPosRankSum=-4.557;VQSLOD=0.4044;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	./.	0/1:6,0:6:8.73:9,0,75	./.	0/1:21,0:7:8.49:8,0,30	0/0:13,0:13:0.98:0,1,2	0/0:19,0:18:18:0,18,509	0/1:21,0:20:28.73:29,0,292	0/1:19,0:16:10.87:11,0,302	0/0:13,0:13:12.02:0,12,236	1/1:16,1:16:34.26:327,34,0	./.	0/1:16,0:16:5.44:5,0,288	0/0:11,0:9:12.01:0,12,319	0/0:13,0:12:33.09:0,33,1046	0/0:9,0:9:3.45:0,3,235	0/1:15,0:15:7.80:8,0,205	1/1:16,0:14:10.49:55,10,0	0/1:11,0:10:33.98:57,0,34	0/0:18,0:17:43.96:0,44,795	0/0:15,0:15:35.82:0,36,813	0/0:62,0:58:74.75:0,75,2984	0/0:23,0:22:35.44:0,35,883	0/0:23,0:23:26.70:0,27,574	0/0:33,0:30:12.99:0,13,1087	./.	1/1:17,1:16:22.28:217,22,0	0/0:11,0:11:18.94:0,19,646	1/1:6,1:7:9.03:156,9,0
chr10	47809500	.	GTGTGTA	G	903.83	PASS	AB=0.951;AC=16;AF=0.333;AN=48;BaseQRankSum=2.619;DP=479;FS=4.819;HRun=0;HaplotypeScore=97.0920;InbreedingCoeff=0.2820;MQ=45.45;MQ0=27;MQRankSum=-4.298;QD=5.25;ReadPosRankSum=-4.649;VQSLOD=-0.3077;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/1:6,0:6:9:9,0,51	./.	0/1:20,0:6:8.56:9,0,9	0/0:4,9:13:0.41:0,0,2	0/0:18,0:17:17.71:0,18,338	0/1:21,0:20:56.98:57,0,164	0/1:19,0:16:29.68:30,0,172	0/0:14,0:14:9.48:0,9,156	1/1:16,1:16:33.18:343,33,0	./.	0/1:16,0:16:5.44:5,0,213	0/0:12,0:10:12.01:0,12,246	0/0:13,0:12:33.06:0,33,827	0/1:9,0:9:0.40:0,0,172	0/1:15,0:15:9.36:9,0,139	1/1:5,10:13:10.88:76,11,0	0/1:4,7:10:26.91:77,0,27	0/0:18,0:17:27.28:0,27,586	0/0:15,0:15:35.66:0,36,596	0/0:59,0:55:64.17:0,64,2281	0/0:23,0:22:35.43:0,35,655	0/0:22,0:22:22.74:0,23,379	0/0:33,0:30:12.96:0,13,845	./.	1/1:6,11:15:23.29:268,23,0	0/0:11,0:11:18.82:0,19,502	1/1:6,0:6:9.03:178,9,0
chr10	47809506	.	A	ATG	658.84	PASS	AB=0.906;AC=16;AF=0.333;AN=48;BaseQRankSum=1.483;DP=457;FS=3.598;HRun=0;HaplotypeScore=74.6385;InbreedingCoeff=0.2630;MQ=45.05;MQ0=29;MQRankSum=0.843;QD=3.28;ReadPosRankSum=-0.120;VQSLOD=1.8925;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:6,0:6:2.02:0,2,7	./.	0/0:22,0:5:0:0,0,0	1/1:12,0:12:0.26:0,0,0	0/1:16,0:15:4.43:68,0,4	0/1:18,0:16:1.11:59,0,1	0/0:17,0:15:12.40:0,12,122	1/1:4,9:13:6.02:93,6,0	0/0:15,0:14:12.77:0,13,65	./.	0/1:6,10:16:4.55:35,0,5	1/1:6,5:9:3.01:49,3,0	0/0:13,0:12:23.98:0,24,231	0/1:9,0:9:9.36:9,0,29	0/1:13,0:13:13:49,0,13	0/1:16,0:13:6.84:7,0,22	0/0:10,0:9:2.80:0,3,13	0/0:21,0:19:29.59:0,30,236	0/0:14,0:14:32.93:0,33,311	0/0:56,0:52:41.07:0,41,587	0/1:24,0:23:0.74:106,0,1	0/1:9,12:21:2.18:2,0,30	1/1:32,0:28:29.85:318,30,0	./.	0/0:14,0:12:11.58:0,12,53	0/0:8,0:8:12.97:0,13,149	0/0:6,0:6:4.56:0,5,20
chr10	47809536	.	GAGA	G	282.33	PASS	AB=1.000;AC=3;AF=0.063;AN=48;BaseQRankSum=3.620;DP=427;FS=12.241;HRun=0;HaplotypeScore=64.0193;InbreedingCoeff=0.3191;MQ=39.16;MQ0=65;MQRankSum=-2.897;QD=8.82;ReadPosRankSum=0.333;VQSLOD=1.6450;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:18:1.36:0,1,2	0/0:6,0:6:5.95:0,6,66	./.	0/0:24,0:1:1.25:0,1,3	./.	0/0:13,0:12:9.02:0,9,129	0/0:12,0:9:6.01:0,6,103	1/1:6,14:16:4.29:359,4,0	0/0:16,0:14:18.06:0,18,290	0/0:15,0:12:5.87:0,6,170	./.	0/0:17,0:16:15.05:0,15,300	0/0:9,0:7:3.01:0,3,72	0/0:11,0:9:18.06:0,18,345	0/0:8,0:7:10.27:0,10,146	0/1:12,0:12:6.66:7,0,45	0/0:13,0:10:9.03:0,9,138	0/0:7,0:5:6.02:0,6,89	0/0:16,0:15:42.08:0,42,668	0/0:18,0:14:27.05:0,27,535	0/0:31,0:23:50.89:0,51,1048	0/0:22,0:18:17.96:0,18,313	0/0:21,0:18:6.02:0,6,140	0/0:30,0:22:24:0,24,485	./.	0/0:15,0:11:23.10:0,23,329	0/0:11,0:9:23.81:0,24,373	0/0:10,0:5:12.04:0,12,191
chr10	47809537	.	AGAGAGGGG	A	490.18	PASS	AB=0.944;AC=18;AF=0.360;AN=50;BaseQRankSum=4.315;DP=430;FS=4.013;HRun=0;HaplotypeScore=76.1735;InbreedingCoeff=0.3301;MQ=38.65;MQ0=72;MQRankSum=-4.403;QD=3.04;ReadPosRankSum=1.173;VQSLOD=1.3877;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:18:0.94:0,1,2	1/1:1,5:6:3.01:47,3,0	./.	0/0:24,0:1:0.47:0,0,1	./.	0/1:6,6:11:0:0,0,0	1/1:13,0:9:3:37,3,0	0/0:20,0:16:29.51:0,30,169	0/0:17,0:15:18.06:0,18,304	1/1:16,0:13:24.10:161,24,0	0/0:7,0:7:0:0,0,0	0/1:18,0:16:5.79:6,0,165	0/0:9,0:7:3:0,3,28	0/0:11,0:9:9.03:0,9,187	1/1:7,0:6:1.97:60,2,0	0/0:12,0:12:2.57:0,3,185	1/1:13,0:10:8.34:56,8,0	1/1:7,0:5:5.71:32,6,0	0/0:15,0:13:29.87:0,30,477	0/0:18,0:14:26.87:0,27,512	0/0:29,0:21:47.99:0,48,954	0/0:22,0:18:17.73:0,18,333	0/0:22,0:18:3.01:0,3,86	0/1:31,0:23:25.50:25,0,111	./.	0/1:15,0:10:6.83:134,0,7	0/1:11,0:9:0.05:0,0,197	0/1:12,0:5:72.81:73,0,106
chr10	47809539	.	AGAGGGG	A	497.09	PASS	AB=0.980;AC=19;AF=0.380;AN=50;BaseQRankSum=4.073;DP=419;FS=2.794;HRun=0;HaplotypeScore=66.5393;InbreedingCoeff=0.3652;MQ=37.79;MQ0=75;MQRankSum=-3.692;QD=3.17;ReadPosRankSum=1.450;VQSLOD=1.5019;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,1:17:0.47:0,0,2	1/1:6,0:6:3.01:39,3,0	./.	0/0:24,0:1:0.47:0,0,1	./.	0/1:8,1:8:0:0,0,0	1/1:9,5:9:3:37,3,0	0/0:20,0:16:40.10:0,40,234	0/0:17,0:15:18.06:0,18,295	1/1:15,0:12:23.76:171,24,0	0/0:7,0:6:0:0,0,0	0/1:18,0:16:5.79:6,0,161	0/0:11,0:9:6.90:0,7,60	0/0:10,0:8:9.03:0,9,165	1/1:4,3:6:0.92:37,1,0	0/1:11,0:11:17.06:17,0,163	1/1:13,0:10:8.34:56,8,0	1/1:7,0:5:5.89:37,6,0	0/0:13,0:12:30.06:0,30,482	0/0:17,0:13:26.30:0,26,499	0/0:28,0:19:47.99:0,48,959	0/0:19,0:15:17.73:0,18,331	0/0:23,0:19:3.01:0,3,86	0/1:30,0:22:25.50:25,0,122	./.	1/1:15,0:10:12.20:143,12,0	0/0:10,0:8:0.74:0,1,170	0/1:12,0:5:77.41:77,0,87
chr10	47809561	.	GGAGA	G	95.18	PASS	AB=1.000;AC=10;AF=0.313;AN=32;BaseQRankSum=0.208;DP=361;FS=11.290;HRun=0;HaplotypeScore=60.4664;InbreedingCoeff=0.3915;MQ=31.46;MQ0=68;MQRankSum=1.090;QD=0.92;ReadPosRankSum=0.000;VQSLOD=0.4305;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:14:2.84:0,3,14	./.	./.	./.	./.	0/0:8,0:6:0:0,0,0	./.	0/0:22,0:17:0:0,0,0	1/1:16,0:13:2.60:19,3,0	0/0:17,0:15:4.61:0,5,38	./.	./.	1/1:10,0:9:5.81:81,6,0	0/0:7,0:5:0:0,0,0	0/1:13,0:11:3.50:3,0,4	1/1:11,4:14:2.79:44,3,0	0/0:7,0:5:0.47:0,0,1	./.	0/0:15,0:14:11.97:0,12,137	./.	0/1:25,0:16:0:0,0,0	./.	./.	1/1:24,0:21:7.41:45,7,0	./.	0/0:17,0:12:5.29:0,5,34	0/0:8,0:7:3.01:0,3,54	0/0:18,0:5:2.90:0,3,16
chr10	47811653	.	A	AT	3845.76	PASS	AB=0.889;AC=13;AF=0.232;AN=56;BaseQRankSum=-3.058;DP=531;FS=2.267;HRun=9;HaplotypeScore=63.6049;InbreedingCoeff=0.8843;MQ=70.73;MQ0=0;MQRankSum=-1.188;QD=25.47;ReadPosRankSum=-0.369;VQSLOD=4.2370;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:89.97:0,90,781	0/0:4,0:4:12:0,12,104	0/0:9,0:8:8.03:0,8,58	0/0:16,0:15:18.86:0,19,156	0/0:17,0:17:41.96:0,42,361	0/0:20,0:20:56.99:0,57,495	0/0:20,0:20:50.97:0,51,439	0/0:18,0:18:44.80:0,45,374	1/1:6,22:28:49.10:741,49,0	0/0:32,0:32:83.94:0,84,725	0/0:16,0:16:38.97:0,39,339	1/1:5,21:26:63:654,63,0	1/1:2,17:19:51.14:563,51,0	0/0:11,0:11:29.99:0,30,260	0/0:14,0:14:41.99:0,42,364	0/0:17,0:17:44.96:0,45,387	0/0:24,0:24:62.95:0,63,542	0/1:7,1:8:12.18:12,0,135	0/0:21,0:21:56.95:0,57,490	0/0:24,0:24:59.98:0,60,521	0/0:24,0:24:62.96:0,63,547	1/1:2,21:23:60.07:636,60,0	1/1:2,26:28:72.14:775,72,0	1/1:3,16:19:42.11:464,42,0	0/0:8,0:8:20.99:0,21,182	0/0:26,0:26:59.92:0,60,513	0/0:10,0:10:23.87:0,24,208	0/0:13,0:13:35.99:0,36,313
chr10	47811723	.	A	AG	449.11	PASS	AB=1.000;AC=19;AF=0.352;AN=54;BaseQRankSum=6.510;DP=352;FS=17.380;HRun=3;HaplotypeScore=124.0348;InbreedingCoeff=0.6277;MQ=74.96;MQ0=12;MQRankSum=-7.152;QD=4.01;ReadPosRankSum=3.497;VQSLOD=-0.5773;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:75.23:0,75,900	0/0:8,0:8:21.06:0,21,252	0/0:16,0:14:33.56:0,34,384	0/0:21,0:19:25.35:0,25,480	0/0:7,0:7:3.38:0,3,8	0/0:14,0:13:39.09:0,39,443	0/0:23,0:23:54.16:0,54,648	1/1:2,11:13:30.03:396,30,0	1/1:9,0:9:1.21:11,1,0	0/0:12,0:11:11.04:0,11,30	0/0:3,0:3:1.25:0,1,3	1/1:12,0:12:5.21:26,5,0	1/1:10,0:10:6.37:35,6,0	0/0:11,0:11:30.09:0,30,360	0/0:14,0:14:39.12:0,39,468	1/1:7,0:7:6.02:37,6,0	0/1:13,0:12:8.31:20,0,8	1/1:5,0:5:10.35:41,10,0	0/0:21,0:20:54.12:0,54,620	0/0:18,0:17:42.13:0,42,504	0/0:24,0:24:69.20:0,69,816	1/1:13,0:13:5.13:31,5,0	0/1:11,0:11:0.26:0,0,7	1/1:10,0:8:3.32:16,3,0	0/0:4,0:4:1.04:0,1,2	0/1:9,0:8:1.05:1,0,10	0/0:14,0:14:39.10:0,39,456	./.
chr10	47811855	.	TGGG	T	1929.53	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=-4.026;DP=310;FS=5.517;HRun=11;HaplotypeScore=64.6028;InbreedingCoeff=0.7456;MQ=76.46;MQ0=1;MQRankSum=-4.772;QD=21.20;ReadPosRankSum=6.489;VQSLOD=1.4887;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:15:34.13:0,34,259	0/0:1,0:3:3.01:0,3,43	0/1:23,0:18:15.11:15,0,278	0/0:8,0:6:10.85:0,11,164	0/0:2,0:2:2.99:0,3,24	0/0:10,0:11:19.29:0,19,233	0/0:17,0:18:36.10:0,36,498	0/0:5,0:18:41.88:0,42,379	1/1:0,14:14:33.11:433,33,0	0/0:4,0:5:5.92:0,6,43	0/0:3,0:4:11.99:0,12,136	1/1:1,17:18:48.16:629,48,0	1/1:0,7:7:21.07:275,21,0	0/0:2,0:6:16.23:0,16,161	0/0:6,0:6:6.01:0,6,67	0/0:8,0:12:33.04:0,33,404	0/0:23,0:26:60.08:0,60,656	0/0:10,0:10:29.98:0,30,383	0/0:8,0:20:46.12:0,46,375	0/0:4,0:11:29.88:0,30,230	0/0:4,0:11:26.93:0,27,248	1/1:0,10:10:21.07:275,21,0	1/1:0,11:11:20.92:253,21,0	1/1:1,7:8:18.06:232,18,0	0/0:6,0:8:11.13:0,11,148	0/0:6,0:7:9.81:0,10,90	0/0:3,0:16:38.86:0,39,301	0/0:2,0:2:3.01:0,3,61
chr10	47815302	.	G	GC	3905.47	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=6.731;DP=496;FS=0.410;HRun=5;HaplotypeScore=70.7989;InbreedingCoeff=0.9985;MQ=77.31;MQ0=0;MQRankSum=-4.102;QD=32.28;ReadPosRankSum=2.500;VQSLOD=4.2999;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:66.04:0,66,673	0/0:8,0:8:24.06:0,24,264	0/0:24,0:22:48.56:0,49,453	0/0:15,0:14:31.69:0,32,302	0/0:31,0:31:90.22:0,90,964	0/0:20,0:20:48.10:0,48,511	0/0:13,0:13:35.95:0,36,351	0/0:21,0:21:54.10:0,54,564	1/1:2,19:21:51.12:651,51,0	0/0:14,0:14:36.08:0,36,381	0/0:12,0:12:36.09:0,36,387	1/1:4,19:23:51.11:648,51,0	1/1:2,15:17:48.15:620,48,0	0/0:13,0:13:36.06:0,36,371	0/0:15,0:15:42.05:0,42,430	0/0:15,0:15:41.47:0,41,427	0/0:21,0:21:57.14:0,57,611	0/0:24,0:23:69.06:0,69,713	0/0:10,0:10:27.03:0,27,267	0/0:20,0:20:60.15:0,60,644	0/0:11,0:11:27.07:0,27,290	1/1:1,17:18:51.17:671,51,0	1/1:1,18:19:54.18:708,54,0	1/1:2,21:22:48.05:607,48,0	0/0:17,0:17:48.12:0,48,516	0/0:21,0:21:57.14:0,57,614	0/0:16,0:15:48.10:0,48,505	0/0:8,0:8:24.06:0,24,258
chr10	47815349	.	C	CT	1908.70	PASS	AB=0.949;AC=18;AF=0.321;AN=56;BaseQRankSum=-3.199;DP=478;FS=2.456;HRun=10;HaplotypeScore=120.9181;InbreedingCoeff=0.7364;MQ=57.75;MQ0=11;MQRankSum=1.188;QD=10.05;ReadPosRankSum=-2.612;VQSLOD=2.1476;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:53.86:0,54,455	0/0:6,0:6:14.99:0,15,129	0/0:24,0:11:14.94:0,15,120	0/0:19,0:6:10.74:0,11,62	1/1:16,17:34:50.93:511,51,0	0/0:14,0:14:4.88:0,5,152	0/0:17,0:17:20.86:0,21,172	0/0:33,0:34:59.43:0,59,492	0/0:2,0:10:18:0,18,54	1/1:19,5:23:10.35:258,10,0	1/1:2,5:6:8.96:82,9,0	0/0:8,0:13:16.29:0,16,47	0/0:3,0:10:14.26:0,14,41	0/0:14,0:13:20.53:0,21,164	0/0:13,0:13:23.93:0,24,197	0/0:12,0:13:29:0,29,230	1/1:14,10:24:14.97:298,15,0	1/1:8,7:15:19.09:161,19,0	0/1:13,1:13:16.95:17,0,84	0/1:26,1:26:11.32:11,0,210	0/0:5,0:4:2.95:0,3,22	0/0:5,0:17:20.53:0,21,60	0/0:3,0:14:23.21:0,23,68	0/0:3,0:13:10.18:0,10,30	1/1:5,9:13:30.48:298,30,0	1/1:14,8:21:7.99:246,8,0	0/0:17,0:14:12.70:0,13,161	1/1:2,7:9:21.05:224,21,0
chr10	47816215	.	GGTGT	G	1656.42	PASS	AB=0.806;AC=22;AF=0.423;AN=52;BaseQRankSum=0.290;DP=577;FS=5.579;HRun=0;HaplotypeScore=102.6596;InbreedingCoeff=0.3830;MQ=63.67;MQ0=19;MQRankSum=-0.348;QD=5.71;ReadPosRankSum=1.673;VQSLOD=1.5095;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:37:5.37:46,5,0	0/0:7,0:8:12.02:0,12,217	./.	./.	1/1:17,4:21:9.46:113,9,0	0/0:17,0:17:21.05:0,21,349	0/0:25,0:26:6:0,6,74	0/0:23,0:22:3.01:0,3,66	0/1:11,2:17:32.14:76,0,32	0/1:22,1:24:15.88:90,0,16	1/1:12,3:17:14.76:192,15,0	0/0:12,0:17:13.57:0,14,59	0/1:7,1:15:41.40:52,0,41	0/1:9,2:11:77.93:78,0,151	0/0:9,0:14:24.08:0,24,401	0/0:5,0:19:15.52:0,16,252	1/1:23,3:26:4.20:222,4,0	1/1:12,10:24:24.07:353,24,0	0/0:19,0:19:12.04:0,12,247	0/0:22,0:21:5.75:0,6,56	0/0:24,0:23:16.55:0,17,319	0/1:15,1:16:8.60:105,0,9	0/0:12,0:18:13.97:0,14,72	0/1:18,1:25:32.50:33,0,34	1/1:13,1:17:5.55:140,6,0	1/1:15,5:19:16.33:216,16,0	0/0:14,0:17:35.80:0,36,664	1/1:8,5:14:9.02:121,9,0
chr10	47817262	.	C	CG	675.77	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=-1.669;DP=595;FS=7.837;HRun=0;HaplotypeScore=151.3802;InbreedingCoeff=0.6314;MQ=63.97;MQ0=5;MQRankSum=-0.179;QD=13.00;ReadPosRankSum=-1.889;VQSLOD=4.2202;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:81.07:0,81,1066	0/0:8,0:8:24.08:0,24,335	0/1:31,0:16:15.78:16,0,245	0/0:37,0:14:30.07:0,30,359	0/0:16,0:16:45.08:0,45,556	0/0:17,0:17:51.14:0,51,669	0/0:23,0:23:54.13:0,54,731	1/1:2,18:21:48.16:765,48,0	0/0:26,0:26:75.25:0,75,1033	0/0:25,0:25:66.20:0,66,881	0/0:17,0:17:42.14:0,42,586	0/0:27,0:27:78.24:0,78,1060	0/0:12,0:12:33.11:0,33,459	0/0:20,0:20:60.16:0,60,793	0/0:24,0:24:66.06:0,66,861	0/0:23,0:23:63.21:0,63,880	0/0:20,0:20:49.38:0,49,649	0/0:7,0:7:15.02:0,15,190	0/0:19,0:19:57.16:0,57,759	0/0:16,0:16:48.15:0,48,649	0/0:49,0:49:99:0,105,1424	0/0:19,0:19:57.17:0,57,773	0/0:16,0:16:45.12:0,45,590	0/0:24,0:24:58.04:0,58,811	0/0:18,0:18:54.18:0,54,752	0/0:23,0:23:63.21:0,63,879	0/0:12,0:12:36.12:0,36,497	0/0:4,0:4:12.04:0,12,168
chr10	47817334	.	T	TAC	1049.18	PASS	AB=0.972;AC=18;AF=0.321;AN=56;BaseQRankSum=1.690;DP=712;FS=5.424;HRun=0;HaplotypeScore=160.9771;InbreedingCoeff=-0.1217;MQ=52.11;MQ0=17;MQRankSum=1.196;QD=2.61;ReadPosRankSum=-0.593;VQSLOD=2.0387;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:32,4:37:41.19:446,41,0	1/1:6,7:13:14.22:240,14,0	0/1:32,0:11:14.19:14,0,16	0/0:32,0:11:5.57:0,6,31	0/0:16,0:16:0.16:0,0,100	0/1:9,2:11:28.49:40,0,28	0/1:16,5:20:18.19:188,0,18	0/1:16,0:11:1.83:38,0,2	0/0:32,0:31:14.36:0,14,275	0/1:25,0:22:13.92:14,0,51	0/0:18,0:18:20.28:0,20,125	0/1:30,0:29:23.52:24,0,121	0/1:30,0:30:26.48:26,0,163	0/0:24,0:23:51.14:0,51,610	0/1:31,0:31:2.40:2,0,200	0/1:27,0:27:62.48:62,0,113	0/0:39,0:39:5.99:0,6,301	0/1:17,0:17:13.17:13,0,84	0/1:17,1:18:21.62:22,0,249	0/0:17,0:18:32.93:0,33,376	0/0:69,0:70:99:0,123,1523	0/1:26,0:25:51.44:54,0,51	0/0:19,0:19:6.38:0,6,138	0/1:42,0:40:4.99:5,0,126	0/0:19,0:19:28.05:0,28,166	0/1:25,0:25:22.65:23,0,125	0/0:12,0:13:24.99:0,25,324	0/0:8,0:8:19.94:0,20,119
chr10	47817349	.	A	ACG	3210.97	PASS	AB=1.000;AC=30;AF=0.536;AN=56;BaseQRankSum=9.853;DP=702;FS=13.812;HRun=0;HaplotypeScore=163.1553;InbreedingCoeff=0.2795;MQ=50.69;MQ0=21;MQRankSum=5.156;QD=6.59;ReadPosRankSum=5.618;VQSLOD=2.3548;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:36,0:40:16.67:182,17,0	1/1:9,0:10:17.98:151,18,0	0/0:19,0:5:8.89:0,9,85	0/0:26,0:4:5.91:0,6,52	1/1:18,0:18:23.36:151,23,0	0/1:7,0:7:15.32:15,0,19	0/1:25,0:23:8.08:82,0,8	0/0:22,0:17:25.46:0,25,183	0/1:31,0:29:99:121,0,178	1/1:27,1:25:38.09:318,38,0	1/1:19,1:20:16.86:118,17,0	0/1:29,0:28:94.49:156,0,94	0/1:30,0:29:99:286,0,113	0/0:24,0:23:62.91:0,63,786	0/1:29,0:29:99:180,0,142	1/1:27,1:28:14.97:280,15,0	1/1:40,2:42:47.36:285,47,0	1/1:21,0:20:37.27:171,37,0	0/0:17,0:15:16.13:0,16,332	0/0:19,0:17:44.99:0,45,483	0/0:76,0:73:99:0,174,2022	0/1:21,0:20:28.85:243,0,29	0/1:16,0:16:84.43:107,0,84	0/1:41,0:39:76.45:209,0,76	1/1:18,0:18:21.49:88,21,0	0/1:25,0:23:0.65:238,0,1	0/0:12,0:12:35.85:0,36,401	1/1:8,0:8:6.22:25,6,0
chr10	47817351	.	G	GCA	3785.81	PASS	AB=0.857;AC=25;AF=0.463;AN=54;BaseQRankSum=-3.486;DP=706;FS=6.617;HRun=0;HaplotypeScore=159.7630;InbreedingCoeff=-0.1692;MQ=50.64;MQ0=21;MQRankSum=0.739;QD=7.59;ReadPosRankSum=-0.254;VQSLOD=3.0334;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:39,0:39:28.32:73,0,28	1/1:6,4:10:13.29:196,13,0	0/0:18,0:5:2.99:0,3,34	./.	0/1:19,0:19:8.35:8,0,80	1/1:2,4:7:2.96:19,3,0	1/1:11,14:25:3.01:48,3,0	0/1:21,0:16:23.58:49,0,24	0/1:11,20:29:7.96:319,0,8	0/1:28,0:26:0.74:197,0,1	0/1:20,0:20:16.09:16,0,34	0/1:6,24:29:9.58:351,0,10	1/1:10,21:30:0.55:644,1,0	0/0:25,0:24:63.73:0,64,722	0/1:10,19:31:22.81:405,0,23	0/1:27,0:27:81.50:81,0,88	0/1:40,0:40:46.34:46,0,230	0/1:20,0:20:16.37:16,0,63	0/0:17,0:16:15.07:0,15,248	0/0:19,0:18:44.84:0,45,475	0/0:77,0:74:99:0,150,1770	0/1:2,19:20:0.34:499,0,0	0/1:6,10:16:15.58:266,0,16	1/1:10,29:38:1.22:467,1,0	0/1:16,0:16:19.51:20,0,83	0/1:24,0:22:64.13:64,0,74	0/0:12,0:13:27.81:0,28,310	0/0:8,0:8:9.10:0,9,86
chr10	47817366	.	CAT	C	4877.79	PASS	AB=1.000;AC=24;AF=0.429;AN=56;BaseQRankSum=12.114;DP=740;FS=12.120;HRun=0;HaplotypeScore=163.1460;InbreedingCoeff=0.8763;MQ=51.82;MQ0=17;MQRankSum=-0.822;QD=16.15;ReadPosRankSum=0.265;VQSLOD=4.1566;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:34,6:40:33.31:239,33,0	0/1:10,0:10:5.72:6,0,251	0/1:18,0:9:1.07:1,0,170	0/0:24,0:10:6.29:0,6,152	1/1:14,4:18:29.53:242,30,0	0/0:9,0:9:10.05:0,10,75	0/0:24,0:22:15.49:0,15,181	1/1:16,6:20:47.10:414,47,0	0/0:27,0:25:33.02:0,33,392	1/1:24,5:28:73.53:707,74,0	1/1:15,3:18:25.40:252,25,0	0/0:33,0:32:50.55:0,51,486	0/0:36,0:35:67.20:0,67,596	0/0:28,0:27:65.77:0,66,1195	0/0:28,0:28:35.76:0,36,343	1/1:25,3:27:60.95:508,61,0	1/1:37,2:39:87.76:720,88,0	1/1:19,5:23:55.63:534,56,0	0/0:23,0:20:42.14:0,42,599	0/0:20,1:20:38.65:0,39,750	0/0:85,0:83:99:0,187,3109	0/0:26,0:25:46.67:0,47,420	0/0:16,0:16:26.74:0,27,269	0/0:40,0:38:50.98:0,51,579	1/1:12,5:17:38.03:379,38,0	1/1:24,4:26:61.36:620,61,0	0/0:17,1:18:16.08:0,16,596	1/1:8,3:11:31.98:256,32,0
chr10	47817370	.	CACAT	C	4261	PASS	AB=0.940;AC=18;AF=0.321;AN=56;BaseQRankSum=8.223;DP=737;FS=12.588;HRun=0;HaplotypeScore=186.4257;InbreedingCoeff=0.6816;MQ=52.43;MQ0=14;MQRankSum=-3.032;QD=15.27;ReadPosRankSum=-0.052;VQSLOD=3.8629;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:39,3:42:99:296,0,109	0/0:11,0:11:27.02:0,27,498	0/0:20,0:12:36.01:0,36,638	0/0:23,0:11:10.04:0,10,366	1/1:15,2:17:18.93:115,19,0	0/0:9,0:9:10.27:0,10,191	0/0:22,0:21:18.06:0,18,424	1/1:9,14:22:28.15:606,28,0	0/0:25,0:23:33.02:0,33,748	1/1:22,6:27:32.26:662,32,0	1/1:17,1:18:19.67:216,20,0	0/0:32,0:31:51.15:0,51,1084	0/0:36,0:35:67.96:0,68,1283	0/0:28,0:27:69.02:0,69,1452	0/0:27,0:27:39.09:0,39,905	1/1:24,3:27:33.35:341,33,0	0/1:38,2:40:21.03:472,0,21	1/1:23,1:23:46.59:464,47,0	0/0:23,0:20:46.35:0,46,908	0/0:18,0:17:48.07:0,48,980	0/0:87,0:85:99:0,216,4444	0/0:26,0:25:53.56:0,54,1039	0/0:18,0:18:39:0,39,663	0/0:37,0:35:53.94:0,54,1211	0/1:18,0:18:4.18:253,0,4	0/1:24,4:26:31.65:489,0,32	0/0:16,0:16:37.77:0,38,914	1/1:14,0:14:25.28:347,25,0
chr10	47817872	.	GTA	G	1124.75	PASS	AB=0.980;AC=20;AF=0.357;AN=56;BaseQRankSum=0.744;DP=813;FS=6.152;HRun=0;HaplotypeScore=161.8597;InbreedingCoeff=0.4404;MQ=53.07;MQ0=23;MQRankSum=-2.671;QD=3.64;ReadPosRankSum=-5.646;VQSLOD=0.4384;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:34,0:32:17.95:143,18,0	0/0:9,0:9:23.37:0,23,259	0/0:23,0:10:10.79:0,11,87	0/0:39,0:13:19.68:0,20,164	1/1:20,1:20:4.90:30,5,0	0/0:20,0:20:30.37:0,30,655	0/0:28,0:28:63.43:0,63,825	1/1:26,0:25:28.87:287,29,0	0/0:48,0:47:10.03:0,10,458	0/1:32,1:30:65.91:136,0,66	1/1:12,0:11:1.96:22,2,0	0/0:48,0:47:56.51:0,57,576	0/0:34,0:34:9.30:0,9,333	0/0:39,0:39:99:0,104,1378	0/0:48,0:48:99:0,128,1856	0/1:25,0:25:15.68:108,0,16	1/1:26,1:27:35.50:257,36,0	1/1:11,0:9:0.91:59,1,0	0/1:18,0:15:9.23:9,0,334	0/0:28,0:28:37.74:0,38,829	0/0:49,0:46:99:0,111,1573	0/0:38,0:36:33.08:0,33,381	0/0:29,0:29:33.06:0,33,367	0/1:48,0:47:32:32,0,863	0/1:20,1:21:4.41:19,0,4	0/1:21,1:19:61.27:135,0,61	0/0:22,1:23:29.37:0,29,675	1/1:10,0:9:10.02:72,10,0
chr10	47817874	.	A	ATG	3444.83	PASS	AB=0.871;AC=32;AF=0.593;AN=54;BaseQRankSum=-0.620;DP=822;FS=4.553;HRun=0;HaplotypeScore=159.3998;InbreedingCoeff=0.3583;MQ=52.95;MQ0=23;MQRankSum=-1.210;QD=6.75;ReadPosRankSum=1.343;VQSLOD=3.4414;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/1:10,0:10:23.07:48,0,23	0/0:23,0:10:8.87:0,9,92	0/0:41,0:14:3.01:0,3,36	1/1:21,0:20:2.96:23,3,0	0/1:20,0:20:21.30:21,0,79	0/1:29,0:29:3.15:3,0,154	1/1:26,0:24:4.21:21,4,0	0/1:15,35:48:35.03:410,0,35	1/1:34,0:31:20.94:188,21,0	1/1:12,0:11:2.60:10,3,0	0/1:20,26:45:10.62:203,0,11	1/1:7,26:33:18.46:405,18,0	0/0:40,0:40:96.20:0,96,1075	0/0:50,0:50:0.85:0,1,359	1/1:25,0:25:0.02:111,0,0	1/1:26,0:26:5.99:24,6,0	1/1:11,0:9:5.61:32,6,0	0/0:18,0:15:32.84:0,33,349	0/0:29,0:29:61.67:0,62,657	0/0:50,0:48:90.05:0,90,1010	1/1:8,29:36:24.08:382,24,0	1/1:4,23:28:18.05:371,18,0	1/1:37,14:50:50.92:1082,51,0	1/1:19,0:19:2.21:10,2,0	0/1:22,0:19:1.57:84,0,2	0/0:23,0:24:53.43:0,53,513	1/1:9,0:8:5.50:14,6,0
chr10	47817893	.	TGA	T	2164.93	PASS	AB=0.947;AC=23;AF=0.411;AN=56;BaseQRankSum=6.529;DP=866;FS=2.346;HRun=0;HaplotypeScore=169.6262;InbreedingCoeff=0.5546;MQ=52.54;MQ0=29;MQRankSum=-3.610;QD=6.72;ReadPosRankSum=-5.851;VQSLOD=1.4750;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:25,1:33:11.93:88,12,0	0/1:9,0:9:29.60:51,0,30	0/0:44,0:11:11.27:0,11,187	0/0:59,0:12:2.64:0,3,124	1/1:7,10:19:2.99:23,3,0	0/1:20,0:20:57.90:58,0,149	0/1:32,1:33:99:213,0,262	0/0:30,0:29:53.80:0,54,446	0/0:52,1:52:69.01:0,69,747	1/1:30,6:36:59.61:542,60,0	1/1:7,7:13:11.98:107,12,0	0/0:43,0:45:44.75:0,45,451	0/0:34,0:34:45.89:0,46,492	0/0:41,0:41:79.04:0,79,1433	0/1:48,0:48:89.62:90,0,574	0/1:16,0:23:19.65:76,0,20	1/1:12,9:21:29.86:270,30,0	1/1:6,2:6:11.99:118,12,0	0/0:22,0:16:23.40:0,23,392	0/0:32,0:32:67.84:0,68,895	0/0:48,0:46:89.90:0,90,1563	0/0:38,0:36:33.06:0,33,360	0/0:30,0:30:36.06:0,36,387	0/0:45,0:44:65.58:0,66,971	1/1:12,7:21:14.97:132,15,0	1/1:16,7:21:44.98:463,45,0	0/0:22,0:22:30.81:0,31,618	1/1:5,4:8:11.80:137,12,0
chr10	47817934	.	CTG	C	3203.28	PASS	AB=0.625;AC=19;AF=0.339;AN=56;BaseQRankSum=8.718;DP=937;FS=1.277;HRun=0;HaplotypeScore=154.7318;InbreedingCoeff=0.9103;MQ=52.35;MQ0=29;MQRankSum=-3.058;QD=14.49;ReadPosRankSum=1.556;VQSLOD=3.8042;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:30,20:43:15.59:431,16,0	0/0:11,0:11:27.09:0,27,442	0/0:61,0:9:14.99:0,15,143	0/0:63,0:13:15.72:0,16,204	1/1:5,9:14:9.03:113,9,0	0/0:30,1:30:65.65:0,66,936	0/0:29,0:29:19.41:0,19,686	0/0:60,0:55:99:0,131,1899	0/0:67,0:67:99:0,129,1955	1/1:15,16:29:63.57:736,64,0	1/1:5,11:16:15.05:189,15,0	0/0:44,0:44:68.79:0,69,1205	0/0:32,0:32:62.22:0,62,1033	0/0:45,0:45:99:0,106,1700	0/0:39,0:39:90.28:0,90,1388	1/1:5,17:22:19.72:251,20,0	1/1:17,15:32:53.39:614,53,0	0/1:4,6:10:4.39:203,0,4	0/0:18,0:18:45.15:0,45,738	0/0:31,0:30:66.10:0,66,1014	0/0:69,3:69:99:0,150,2284	0/0:24,0:24:8.44:0,8,520	0/0:28,0:28:45:0,45,655	0/0:40,0:38:80.98:0,81,1234	1/1:10,10:18:21.52:253,22,0	1/1:12,7:18:26.95:417,27,0	0/0:20,1:21:32.13:0,32,773	1/1:2,5:7:18.01:208,18,0
chr10	47818053	.	AGT	A	4202.49	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=2.935;DP=1172;FS=0.753;HRun=0;HaplotypeScore=240.0418;InbreedingCoeff=0.9923;MQ=56.46;MQ0=15;MQRankSum=5.533;QD=15.80;ReadPosRankSum=7.199;VQSLOD=3.1961;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:133,0:127:99:0,183,2667	0/0:12,0:12:33.06:0,33,466	0/0:29,0:13:14.65:0,15,175	0/0:45,0:22:21.99:0,22,258	0/0:8,0:35:36.02:0,36,334	0/0:33,0:33:66.15:0,66,1007	0/0:39,0:39:99:0,108,1513	0/0:45,0:42:57.66:0,58,1027	1/1:5,58:63:71.33:845,71,0	0/0:36,0:52:99:0,129,1230	0/0:7,0:25:51.03:0,51,458	1/1:13,47:58:74.89:936,75,0	1/1:9,35:44:29.94:509,30,0	0/0:46,0:46:99:0,126,1881	0/0:52,0:52:99:0,120,1656	0/0:30,0:29:56.91:0,57,740	0/0:14,0:32:30.79:0,31,492	0/0:13,0:19:47.90:0,48,417	0/0:23,0:18:38.32:0,38,539	0/0:27,2:29:34.72:0,35,960	0/0:131,0:131:99:0,324,4622	1/1:4,22:26:36.06:447,36,0	1/1:5,23:28:49.66:603,50,0	1/1:8,35:44:69.22:861,69,0	0/0:12,0:25:54.01:0,54,491	0/0:26,0:41:99:0,111,1031	0/0:16,0:16:42.03:0,42,530	0/0:5,0:5:15.02:0,15,151
chr10	47818089	.	C	CTG	7860.24	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=1.344;DP=1143;FS=0.661;HRun=0;HaplotypeScore=227.0614;InbreedingCoeff=0.9806;MQ=56.27;MQ0=19;MQRankSum=-0.326;QD=22.14;ReadPosRankSum=1.864;VQSLOD=4.5500;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:72,50:114:99:1824,130,0	0/0:14,0:14:33.10:0,33,405	0/0:49,0:18:17.50:0,17,359	0/0:59,0:25:34.54:0,35,294	1/1:12,13:25:36.08:521,36,0	0/0:34,0:34:69.18:0,69,850	0/0:45,0:45:99:0,111,1304	0/0:25,0:19:5.44:0,5,31	0/0:65,0:64:99:0,102,1190	1/1:23,16:39:89.18:1199,89,0	1/1:13,7:20:24.08:378,24,0	0/0:57,0:56:96.97:0,97,1125	0/0:29,0:29:44.97:0,45,499	0/0:40,0:40:93.15:0,93,1109	0/0:52,0:51:99:0,111,1269	1/1:14,12:25:33.11:548,33,0	1/1:15,10:26:30.59:617,31,0	1/1:10,11:21:34.02:699,34,0	0/0:34,0:31:48.14:0,48,583	0/0:31,0:31:78.96:0,79,936	0/0:135,1:131:99:0,315,3800	0/0:31,0:31:36.71:0,37,625	0/0:28,0:28:50.92:0,51,628	0/0:44,0:44:91.99:0,92,1062	1/1:10,17:27:48.09:709,48,0	1/1:15,24:38:62.42:929,62,0	0/0:14,0:14:27.04:0,27,322	1/1:0,10:10:27.09:436,27,0
chr10	47818093	.	G	GTA	3048.18	PASS	AB=0.989;AC=13;AF=0.232;AN=56;BaseQRankSum=11.685;DP=1157;FS=1.067;HRun=0;HaplotypeScore=240.9679;InbreedingCoeff=0.2411;MQ=56.12;MQ0=19;MQRankSum=2.586;QD=8.37;ReadPosRankSum=8.058;VQSLOD=2.8213;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:123,4:121:99:710,0,226	0/0:14,0:14:36.11:0,36,527	0/0:50,0:17:45.84:0,46,571	0/0:62,0:27:40.71:0,41,508	0/1:25,0:25:13.52:197,0,14	0/0:32,0:32:79.07:0,79,1112	0/0:45,0:45:99:0,123,1771	0/0:20,0:14:32.97:0,33,308	0/0:66,0:65:99:0,117,1660	0/1:40,0:40:79.28:374,0,79	0/1:21,0:21:99:135,0,146	0/0:59,0:58:99:0,112,1572	0/0:27,0:27:54.12:0,54,739	0/0:44,0:44:99:0,129,1684	0/0:59,0:58:99:0,129,1798	1/1:24,0:23:1.05:259,1,0	0/1:26,0:26:71.60:287,0,72	0/1:23,1:24:31.28:373,0,31	0/0:29,0:26:75.02:0,75,954	0/0:32,0:32:96.20:0,96,1338	0/0:136,0:131:99:0,358,5113	0/0:31,0:31:69.40:0,69,951	0/0:26,0:26:56.93:0,57,825	0/0:47,0:47:99:0,105,1475	1/1:29,0:28:20.62:295,21,0	0/1:37,0:37:99:333,0,130	0/0:14,0:14:33.06:0,33,445	1/1:10,0:10:27:248,27,0
chr10	47818138	.	AGT	A	145.88	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.771;DP=1081;FS=2.968;HRun=0;HaplotypeScore=206.5278;InbreedingCoeff=0.9730;MQ=52.12;MQ0=26;MQRankSum=0.324;QD=11.22;ReadPosRankSum=-0.238;VQSLOD=3.2759;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:71,0:70:71.92:0,72,1203	1/1:1,12:13:18.06:236,18,0	0/0:42,0:15:23.29:0,23,212	0/0:59,0:19:25.93:0,26,376	0/0:25,0:25:21.07:0,21,353	0/0:27,0:26:59.44:0,59,958	0/0:48,0:48:99:0,117,1827	0/0:66,0:53:99:0,150,2381	0/0:58,0:56:99:0,114,1847	0/0:47,0:44:99:0,123,1870	0/0:12,0:12:24.07:0,24,367	0/0:59,0:57:99:0,138,2301	0/0:23,0:23:50.39:0,50,685	0/0:41,1:42:97.88:0,98,1539	0/0:54,0:53:99:0,132,2112	0/0:27,0:26:38.96:0,39,608	0/0:22,0:22:34.24:0,34,703	0/0:27,0:25:57.08:0,57,824	0/0:22,0:21:54.17:0,54,894	0/0:26,0:26:78.18:0,78,1260	0/0:115,0:111:99:0,261,4316	0/0:29,0:30:78.22:0,78,1239	0/0:28,0:28:78.19:0,78,1173	0/0:45,0:44:99:0,99,1547	0/0:26,0:26:26.68:0,27,462	0/0:37,0:37:93.18:0,93,1479	0/0:18,0:18:51.17:0,51,833	0/0:10,0:9:18:0,18,246
chr10	47818162	.	TGAGA	T	5592.55	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=14.499;DP=991;FS=28.445;HRun=0;HaplotypeScore=192.9114;InbreedingCoeff=0.9673;MQ=55.23;MQ0=26;MQRankSum=-6.220;QD=21.18;ReadPosRankSum=2.289;VQSLOD=3.0873;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:16,37:57:30.50:487,31,0	0/0:11,0:11:24.07:0,24,581	0/0:43,0:16:15.93:0,16,463	0/0:50,0:18:10.29:0,10,335	1/1:8,13:20:9.03:149,9,0	0/0:30,0:29:66.23:0,66,1643	0/0:44,0:45:99:0,106,2374	0/0:47,0:38:30.29:0,30,258	0/0:50,0:48:99:0,129,2953	1/1:17,28:41:97.21:1625,97,0	1/1:1,8:9:9.03:159,9,0	0/0:59,0:59:99:0,129,2991	0/0:26,0:26:54.09:0,54,1193	0/0:43,0:44:98.80:0,99,2268	0/0:58,0:57:99:0,117,2915	1/1:8,22:29:23:360,23,0	1/1:4,14:18:38.98:604,39,0	1/1:3,17:19:19.49:516,19,0	0/0:19,0:17:30.10:0,30,741	0/0:28,0:28:69.24:0,69,1692	0/0:88,0:85:99:0,189,4504	0/0:36,0:36:81.23:0,81,1825	0/0:26,0:26:75.26:0,75,1744	0/0:45,0:43:81.23:0,81,1892	1/1:8,16:24:14.76:264,15,0	1/1:12,20:32:75.24:1240,75,0	0/0:19,0:19:54.10:0,54,1257	1/1:4,3:6:14.99:187,15,0
chr10	47818212	.	AGT	A	2837.41	PASS	AB=0.842;AC=19;AF=0.339;AN=56;BaseQRankSum=11.089;DP=942;FS=10.853;HRun=0;HaplotypeScore=181.2889;InbreedingCoeff=0.6917;MQ=53.60;MQ0=23;MQRankSum=-5.537;QD=9.92;ReadPosRankSum=0.805;VQSLOD=2.8227;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:32,18:49:14.99:186,15,0	0/0:10,0:10:18.06:0,18,277	0/0:51,1:17:12.65:0,13,184	0/0:59,0:17:19.46:0,19,190	1/1:10,6:16:2.50:68,3,0	0/0:28,0:27:53.71:0,54,766	0/0:39,0:39:57.12:0,57,845	0/0:34,0:30:65.97:0,66,676	0/0:41,0:41:85.57:0,86,1397	1/1:28,32:55:66.46:1195,66,0	1/1:11,9:20:8.74:98,9,0	0/0:54,0:52:59.74:0,60,820	0/0:32,0:32:50.79:0,51,711	0/0:37,0:37:52.61:0,53,1311	0/0:48,0:48:47.32:0,47,1082	1/1:12,20:32:12.07:239,12,0	0/1:16,4:20:9.21:70,0,9	1/1:11,3:13:20.23:189,20,0	0/1:15,1:11:13.43:13,0,273	0/0:22,0:22:54.16:0,54,834	0/0:71,0:69:99:0,132,1933	0/0:39,1:41:90.23:0,90,1353	0/0:28,0:28:48.03:0,48,655	0/0:34,0:30:45.15:0,45,733	0/1:12,6:18:13.47:112,0,13	1/1:19,19:37:58.13:842,58,0	0/0:22,0:22:51.14:0,51,771	1/1:2,0:2:2.96:19,3,0
chr10	47818240	.	A	AGT	9970.14	PASS	AB=0.686;AC=35;AF=0.648;AN=54;BaseQRankSum=3.506;DP=928;FS=6.235;HRun=0;HaplotypeScore=172.8256;InbreedingCoeff=0.7807;MQ=49.61;MQ0=18;MQRankSum=1.550;QD=16.24;ReadPosRankSum=2.161;VQSLOD=4.5798;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:31,19:48:6.73:180,0,7	1/1:3,11:14:26.67:349,27,0	0/0:56,0:18:39.48:0,39,383	0/0:63,0:14:24.95:0,25,280	1/1:12,8:19:12.02:171,12,0	1/1:10,19:29:36.10:571,36,0	1/1:11,20:31:21.07:349,21,0	0/0:40,0:34:35.58:0,36,621	1/1:29,10:39:59.29:917,59,0	1/1:38,24:57:55.14:1299,55,0	1/1:9,12:21:11.96:199,12,0	0/1:10,36:45:1.95:461,0,2	1/1:6,27:33:38.73:589,39,0	0/0:40,0:40:67.52:0,68,826	1/1:10,34:45:50.89:786,51,0	1/1:14,17:30:35.90:485,36,0	0/1:12,5:16:16.60:237,0,17	1/1:5,4:8:15.05:223,15,0	0/0:16,0:12:26.26:0,26,251	0/0:18,0:18:42.06:0,42,503	0/0:54,0:53:99:0,99,1229	1/1:23,14:36:66.21:1057,66,0	1/1:2,18:19:27.09:448,27,0	1/1:33,6:34:30.10:491,30,0	1/1:14,6:20:14.41:197,14,0	1/1:39,11:48:11.91:962,12,0	0/0:24,0:24:53.95:0,54,639	./.
chr10	47818255	.	C	CTG	2162.02	PASS	AB=0.975;AC=29;AF=0.518;AN=56;BaseQRankSum=8.096;DP=888;FS=1.750;HRun=0;HaplotypeScore=202.1813;InbreedingCoeff=0.4488;MQ=46.16;MQ0=30;MQRankSum=-1.553;QD=4.03;ReadPosRankSum=-2.042;VQSLOD=2.6379;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:38,0:41:0.04:0,0,1	0/1:16,0:16:6.91:98,0,7	0/0:45,0:15:5.02:0,5,52	0/0:51,0:9:0.88:0,1,2	1/1:25,0:22:5.99:50,6,0	1/1:27,2:28:39.77:350,40,0	0/1:27,3:29:2.44:99,0,2	0/1:29,0:27:16.82:17,0,19	0/0:35,0:33:23.39:0,23,145	1/1:56,0:49:44.81:324,45,0	1/1:22,0:22:9.77:73,10,0	0/1:49,0:46:16.44:16,0,23	0/0:32,0:31:2.50:0,2,50	0/0:35,0:35:27.04:0,27,262	1/1:39,6:45:30.19:360,30,0	1/1:31,0:30:18.60:128,19,0	1/1:15,0:16:11.52:82,12,0	1/1:8,0:7:8.95:67,9,0	0/0:20,0:16:15.73:0,16,128	0/0:25,0:24:23.90:0,24,192	0/0:48,0:47:42.09:0,42,342	0/0:35,0:33:0.05:0,0,135	0/1:21,0:20:3.45:3,0,54	0/1:36,0:31:6.41:6,0,76	1/1:20,0:20:8.98:74,9,0	1/1:48,0:49:79.73:575,80,0	0/0:24,0:24:20.74:0,21,157	1/1:3,0:3:2.96:19,3,0
chr10	47818278	.	T	TGAGAGA	4799.65	PASS	AB=1.000;AC=41;AF=0.788;AN=52;BaseQRankSum=-3.648;DP=758;FS=7.965;HRun=0;HaplotypeScore=214.3328;InbreedingCoeff=0.5968;MQ=42.34;MQ0=27;MQRankSum=-2.765;QD=8.25;ReadPosRankSum=-0.186;VQSLOD=2.8771;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:2.23:0,2,20	0/0:15,0:15:11.79:0,12,176	./.	./.	1/1:33,0:31:28.19:483,28,0	0/0:29,0:28:15.13:0,15,470	0/0:33,0:32:22.98:0,23,281	1/1:38,0:29:22.16:260,22,0	1/1:30,0:27:14.84:239,15,0	1/1:47,0:46:55.89:1123,56,0	1/1:20,0:20:9.49:156,9,0	1/1:47,0:44:20.51:319,21,0	1/1:31,0:30:23.22:433,23,0	1/1:20,9:33:7.82:80,8,0	0/0:42,0:43:44.48:0,44,686	1/1:25,0:23:17.98:272,18,0	1/1:15,0:14:19.29:273,19,0	1/1:8,0:7:11.95:136,12,0	1/1:17,0:13:14.82:181,15,0	1/1:14,14:29:3.01:38,3,0	1/1:40,1:37:14.01:198,14,0	1/1:27,0:24:2.94:52,3,0	1/1:17,0:17:9.47:126,9,0	1/1:33,0:30:2.95:33,3,0	1/1:14,0:14:5.94:77,6,0	0/1:42,0:40:93.57:176,0,94	1/1:8,0:20:2.51:88,3,0	1/1:1,0:3:3.01:58,3,0
chr10	47818659	.	G	GA	1082.43	PASS	AB=0.931;AC=3;AF=0.054;AN=56;BaseQRankSum=-6.000;DP=672;FS=12.259;HRun=3;HaplotypeScore=66.3935;InbreedingCoeff=0.7010;MQ=84.03;MQ0=0;MQRankSum=-3.878;QD=18.99;ReadPosRankSum=0.078;VQSLOD=2.2193;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,117,1390	0/0:11,0:11:30.09:0,30,360	0/0:27,0:27:63.19:0,63,752	0/0:19,0:19:48.04:0,48,532	0/0:27,0:27:63.19:0,63,755	0/0:22,0:22:66.20:0,66,792	0/0:30,0:30:87.25:0,87,1033	0/0:30,0:30:81.25:0,81,972	0/0:28,0:28:72.22:0,72,864	1/1:1,29:30:84.28:1176,84,0	0/0:17,0:17:39.11:0,39,455	0/0:23,0:23:60.17:0,60,709	0/0:35,0:35:90.26:0,90,1068	0/0:21,0:21:60.18:0,60,720	0/0:19,0:19:57.16:0,57,673	0/0:22,0:22:63.18:0,63,745	0/0:32,0:32:87.27:0,87,1044	0/0:17,0:17:51.16:0,51,611	0/0:21,0:21:63.19:0,63,756	0/0:29,0:29:78.24:0,78,936	0/0:26,0:26:75.21:0,75,887	0/0:19,0:19:54.15:0,54,636	0/0:14,0:14:36.09:0,36,432	0/0:26,0:26:78.22:0,78,924	0/0:18,0:18:51.16:0,51,612	0/1:25,2:27:5.81:6,0,786	0/0:29,0:29:84.26:0,84,1008	0/0:13,0:13:39.12:0,39,468
chr10	47819454	.	C	CTGAGGGCCTCCA	18237.54	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=11.987;DP=569;FS=0.000;HRun=0;HaplotypeScore=198.3073;InbreedingCoeff=0.9865;MQ=84.86;MQ0=0;MQRankSum=-15.103;QD=135.09;ReadPosRankSum=2.781;VQSLOD=5.0805;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,17:22:48.16:2846,48,0	0/0:11,0:11:33.11:0,33,1248	0/0:16,0:16:42.04:0,42,1123	0/0:24,0:24:58.37:0,58,1875	1/1:1,16:22:32.97:1894,33,0	0/0:18,0:18:54.17:0,54,1961	0/0:29,0:29:87.30:0,87,3170	1/1:1,0:5:15.04:689,15,0	0/0:23,0:23:69.21:0,69,2404	1/1:0,15:15:45.15:2808,45,0	1/1:0,9:9:24:948,24,0	0/0:24,0:24:69.22:0,69,2560	0/0:22,0:22:66.20:0,66,2353	0/0:23,0:23:66.21:0,66,2417	0/0:37,0:37:99:0,111,4188	1/1:0,12:14:36.12:2238,36,0	1/1:1,14:18:36.12:2248,36,0	1/1:0,5:6:15.05:907,15,0	0/0:24,0:24:72.21:0,72,2511	0/0:28,0:28:84.29:0,84,3203	0/0:46,0:45:99:0,138,5111	0/0:31,0:31:90.28:0,90,3300	0/0:30,0:30:87.30:0,87,3323	0/0:28,0:28:84.29:0,84,3092	1/1:0,9:10:27.09:1589,27,0	1/1:1,8:11:30.04:1596,30,0	0/0:20,0:20:60.21:0,60,2314	1/1:0,3:3:9.03:474,9,0
chr10	47820771	.	T	TAGGAGG	264.35	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-0.851;DP=436;FS=17.884;HRun=0;HaplotypeScore=119.5204;InbreedingCoeff=0.9044;MQ=64.62;MQ0=0;MQRankSum=-0.194;QD=26.44;ReadPosRankSum=-1.931;VQSLOD=2.0256;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:51.17:0,51,1070	0/0:7,0:7:15.05:0,15,323	0/0:16,0:13:20.74:0,21,473	0/0:23,0:21:16.84:0,17,644	0/0:16,0:16:36.12:0,36,775	0/0:12,0:12:30.03:0,30,580	0/0:28,0:28:48.15:0,48,956	1/1:6,3:10:12.04:350,12,0	0/0:16,0:16:45.15:0,45,942	0/0:16,0:16:45.15:0,45,969	0/0:7,0:7:15.05:0,15,323	0/0:20,0:20:45.15:0,45,946	0/0:9,0:9:24.08:0,24,498	0/0:14,0:14:36.09:0,36,675	0/0:7,0:7:18.06:0,18,368	0/0:8,0:8:24.07:0,24,458	0/0:22,0:22:57.19:0,57,1167	0/0:19,0:19:45.15:0,45,962	0/0:10,0:10:24.08:0,24,512	0/0:14,0:14:36.07:0,36,730	0/0:36,0:36:81.25:0,81,1648	0/0:16,0:16:42.13:0,42,864	0/0:10,0:10:24.05:0,24,474	0/0:27,0:27:60.17:0,60,1232	0/0:19,0:19:45.15:0,45,967	0/0:16,0:16:39.12:0,39,770	0/0:10,0:10:27.09:0,27,581	0/0:8,0:8:21.05:0,21,411
chr10	47821980	.	ACTGT	A	10180.70	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=15.617;DP=585;FS=10.698;HRun=0;HaplotypeScore=105.8043;InbreedingCoeff=0.9894;MQ=85.38;MQ0=0;MQRankSum=-5.680;QD=45.65;ReadPosRankSum=3.545;VQSLOD=5.3687;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,23:26:63.22:1159,63,0	0/0:6,0:6:15.05:0,15,394	0/0:22,0:22:51.17:0,51,1246	0/0:22,0:22:66.16:0,66,1536	1/1:0,14:14:42.14:734,42,0	0/0:22,0:22:63.22:0,63,1663	0/0:33,0:33:99:0,99,2528	1/1:2,21:23:63.19:1086,63,0	0/0:15,0:15:42.14:0,42,1105	1/1:0,20:20:60.19:1067,60,0	1/1:1,18:19:51.17:938,51,0	0/0:25,0:25:69.24:0,69,1820	0/0:17,0:17:51.16:0,51,1260	0/0:13,0:13:39.13:0,39,969	0/0:23,0:23:63.22:0,63,1633	1/1:4,16:20:45.15:828,45,0	1/1:4,36:40:87.04:1600,87,0	1/1:0,16:16:45.15:828,45,0	0/0:23,0:23:69.24:0,69,1797	0/0:15,0:15:42.13:0,42,1024	0/0:50,0:50:99:0,151,3921	0/0:20,0:20:57.18:0,57,1409	0/0:15,0:15:45.14:0,45,1133	0/0:22,0:22:66.23:0,66,1743	1/1:2,16:18:51.17:934,51,0	1/1:2,16:18:48.14:839,48,0	0/0:19,0:19:51.13:0,51,1278	1/1:1,8:9:9.03:166,9,0
chr10	47823199	.	AAG	A	2829.05	PASS	AB=0.978;AC=35;AF=0.625;AN=56;BaseQRankSum=-2.562;DP=461;FS=14.327;HRun=0;HaplotypeScore=63.2168;InbreedingCoeff=0.4528;MQ=65.73;MQ0=3;MQRankSum=1.229;QD=8.39;ReadPosRankSum=-1.684;VQSLOD=1.6637;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:23:12.27:200,0,12	0/1:7,1:8:20.89:47,0,21	0/0:16,0:9:26.87:0,27,212	0/0:13,0:10:12.48:0,12,153	0/1:12,0:12:12.70:41,0,13	1/1:10,1:10:5.27:76,5,0	1/1:20,2:22:4.33:229,4,0	0/1:24,0:24:8.74:170,0,9	1/1:13,1:14:5.16:25,5,0	1/1:22,0:22:16.97:246,17,0	1/1:14,0:14:3.56:135,4,0	1/1:17,2:18:21.75:239,22,0	1/1:20,1:21:42.80:360,43,0	0/0:16,0:16:30.01:0,30,331	1/1:14,1:15:3.24:138,3,0	1/1:16,0:16:2.91:138,3,0	1/1:17,0:17:8.41:112,8,0	0/1:16,0:16:6.47:62,0,6	0/0:19,0:19:34.74:0,35,370	0/0:9,0:9:14.98:0,15,149	0/0:23,0:22:42:0,42,456	1/1:16,1:15:14.69:97,15,0	1/1:8,1:9:3.27:68,3,0	1/1:17,1:18:22.79:188,23,0	1/1:18,0:18:28.30:246,28,0	1/1:21,0:21:4.88:202,5,0	0/0:19,0:19:33.74:0,34,284	0/0:9,0:8:4.55:0,5,22
chr10	47823200	.	AG	A	4493.53	PASS	AB=1.000;AC=43;AF=0.768;AN=56;BaseQRankSum=1.306;DP=397;FS=11.143;HRun=1;HaplotypeScore=45.3798;InbreedingCoeff=0.8862;MQ=70.13;MQ0=3;MQRankSum=-3.674;QD=15.23;ReadPosRankSum=1.023;VQSLOD=3.2040;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:20:44.93:313,45,0	1/1:6,0:6:11.38:60,11,0	0/0:16,0:9:26.87:0,27,210	0/0:13,0:10:22.30:0,22,161	1/1:8,0:8:17.52:109,18,0	1/1:5,2:7:14.20:120,14,0	1/1:19,2:21:55.23:379,55,0	1/1:21,0:21:35.92:289,36,0	1/1:2,11:13:5.61:49,6,0	1/1:15,2:17:45.87:353,46,0	1/1:10,0:10:22.25:168,22,0	1/1:16,0:15:40.24:327,40,0	1/1:15,4:19:50.62:398,51,0	0/0:15,0:15:32.32:0,32,296	1/1:13,0:13:36.24:240,36,0	1/1:13,0:13:24.57:224,25,0	1/1:11,0:11:23.30:163,23,0	1/1:14,0:14:32.95:208,33,0	0/0:17,0:17:18.41:0,18,304	0/1:9,0:9:0.83:1,0,105	0/0:23,0:22:47.12:0,47,406	1/1:3,10:12:19.17:119,19,0	1/1:6,1:7:14.21:107,14,0	1/1:16,0:16:23.93:194,24,0	1/1:16,0:16:38.28:317,38,0	1/1:17,1:18:41.23:333,41,0	0/0:18,0:18:21.81:0,22,277	1/1:6,0:5:5.58:23,6,0
chr10	47824500	.	C	CA	9890.13	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-16.074;DP=688;FS=10.871;HRun=1;HaplotypeScore=66.4808;InbreedingCoeff=0.9953;MQ=92.66;MQ0=0;MQRankSum=-2.928;QD=40.87;ReadPosRankSum=3.751;VQSLOD=4.8107;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,41:42:99:1754,117,0	0/0:11,0:11:33.11:0,33,428	0/0:29,0:29:84.27:0,84,1080	0/0:28,0:28:81.18:0,81,999	1/1:0,16:16:39.13:582,39,0	0/0:20,0:20:60.18:0,60,763	0/0:32,0:32:96.31:0,96,1246	0/0:22,0:22:60.19:0,60,777	0/0:30,0:30:90.29:0,90,1167	1/1:1,24:25:75.21:1099,75,0	1/1:0,6:6:12.04:180,12,0	0/0:40,0:40:99:0,111,1426	0/0:17,0:17:51.17:0,51,661	0/0:23,0:23:63.20:0,63,818	0/0:27,0:27:72.23:0,72,935	1/1:0,19:19:57.19:855,57,0	1/1:0,43:42:99:1709,114,0	1/1:1,34:35:96.33:1438,96,0	0/0:25,0:25:66.21:0,66,857	0/0:15,0:15:42.14:0,42,545	0/0:50,0:50:99:0,147,1891	0/0:16,0:16:45.15:0,45,584	0/0:10,0:10:30.08:0,30,374	0/0:27,0:27:81.22:0,81,1031	1/1:2,21:23:60.20:899,60,0	1/1:2,18:20:54.17:789,54,0	0/0:24,0:24:72.23:0,72,933	1/1:0,13:13:39.13:585,39,0
chr10	47826289	.	GGA	G	416.66	PASS	AB=0.925;AC=9;AF=0.161;AN=56;BaseQRankSum=3.714;DP=270;FS=68.659;HRun=0;HaplotypeScore=47.3699;InbreedingCoeff=-0.0216;MQ=88.00;MQ0=2;MQRankSum=0.499;QD=5.08;ReadPosRankSum=7.544;VQSLOD=-0.2165;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:3,0:3:2.99:0,3,24	0/0:3,0:3:2.34:0,2,39	0/0:17,0:13:1.76:0,2,222	0/0:19,0:17:26.37:0,26,256	0/0:3,0:3:5.98:0,6,47	0/1:8,0:8:5.96:6,0,97	0/0:24,0:24:60.82:0,61,653	0/0:11,0:11:25.10:0,25,213	0/0:12,0:12:29.65:0,30,322	0/1:9,1:9:49.87:50,0,66	0/0:2,0:2:3:0,3,25	0/0:12,0:12:32.68:0,33,349	0/0:6,0:6:11.58:0,12,63	0/0:6,0:6:11.97:0,12,139	0/0:12,0:12:35.51:0,36,317	0/0:9,0:9:5.03:0,5,30	0/1:22,2:24:61.50:217,0,62	0/1:16,3:19:46.37:131,0,46	0/1:7,0:7:3.13:3,0,55	0/0:1,0:1:3:0,3,26	0/0:15,0:15:35.84:0,36,335	0/0:3,0:3:3:0,3,25	0/0:3,0:3:9.02:0,9,112	0/0:16,0:16:19.72:0,20,298	0/1:5,0:5:13.02:23,0,13	0/1:5,2:7:3.15:91,0,3	0/0:11,0:11:33.03:0,33,383	1/1:2,0:2:2.98:21,3,0
chr10	47829583	.	GGTGTGTGTGTGTGT	G	1001.94	PASS	AB=0.826;AC=16;AF=0.364;AN=44;BaseQRankSum=4.069;DP=562;FS=6.910;HRun=0;HaplotypeScore=182.2880;InbreedingCoeff=0.3855;MQ=69.65;MQ0=18;MQRankSum=-4.143;QD=5.54;ReadPosRankSum=1.307;VQSLOD=2.0528;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:25:2.99:0,3,24	0/0:11,0:12:15.05:0,15,470	./.	./.	./.	0/0:16,0:16:15.52:0,16,594	0/0:35,0:35:15.05:0,15,483	0/0:31,0:30:3:0,3,29	./.	1/1:16,0:17:4.19:113,4,0	1/1:5,2:7:3.01:116,3,0	1/1:25,5:28:3.01:116,3,0	0/1:12,2:14:44:223,0,44	0/0:20,0:20:9.03:0,9,389	0/0:17,0:17:9.02:0,9,206	0/1:15,0:21:11.20:11,0,19	1/1:24,0:24:0.12:114,0,0	1/1:16,11:28:8.23:328,8,0	0/0:6,0:6:1.25:0,1,3	0/0:11,0:11:8.98:0,9,227	0/0:53,0:48:8.99:0,9,278	./.	./.	1/1:23,0:20:3.01:104,3,0	1/1:15,0:15:2.74:12,3,0	0/0:15,0:14:0.89:0,1,2	0/0:12,0:13:12.04:0,12,499	0/0:7,0:6:2.92:0,3,17
chr10	47831310	.	A	AAGAC	1211.58	PASS	AB=0.700;AC=5;AF=0.089;AN=56;BaseQRankSum=0.185;DP=763;FS=0.000;HRun=0;HaplotypeScore=131.1846;InbreedingCoeff=0.7722;MQ=70.89;MQ0=1;MQRankSum=-0.079;QD=15.94;ReadPosRankSum=-3.595;VQSLOD=2.6904;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:90.25:0,90,1017	0/0:14,0:14:24.08:0,24,383	0/0:34,0:30:15.05:0,15,234	0/0:23,0:23:25.83:0,26,351	0/0:23,0:23:30.10:0,30,473	1/1:7,15:22:27.09:646,27,0	0/1:12,8:21:39.42:136,0,39	1/1:33,0:33:39.09:559,39,0	0/0:24,0:23:54.18:0,54,859	0/0:36,0:36:69.24:0,69,1113	0/0:15,0:16:30.08:0,30,439	0/0:34,0:34:66.21:0,66,1040	0/0:21,0:21:45.12:0,45,663	0/0:24,0:24:66.21:0,66,1016	0/0:24,0:24:48.15:0,48,745	0/0:16,0:16:27.09:0,27,419	0/0:38,0:40:84.25:0,84,1274	0/0:31,0:30:58.96:0,59,871	0/0:28,0:29:53.37:0,53,786	0/0:28,0:28:50.89:0,51,754	0/0:32,0:33:60.18:0,60,903	0/0:21,0:21:36.11:0,36,557	0/0:23,0:23:36.04:0,36,527	0/0:39,0:40:84.24:0,84,1300	0/0:26,0:26:57.18:0,57,868	0/0:28,0:28:51.17:0,51,800	0/0:28,0:29:57.19:0,57,899	0/0:14,0:14:27.09:0,27,436
chr10	47831334	.	CAGAGAAAGAAAGAG	C	180.02	PASS	AB=0.744;AC=1;AF=0.018;AN=56;BaseQRankSum=5.413;DP=744;FS=2.512;HRun=0;HaplotypeScore=276.3878;InbreedingCoeff=-0.0182;MQ=68.35;MQ0=3;MQRankSum=1.841;QD=6.21;ReadPosRankSum=-4.602;VQSLOD=1.0642;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:93.32:0,93,3002	0/0:11,0:11:33.11:0,33,1827	0/0:30,0:22:42.65:0,43,1718	0/0:49,0:38:76.77:0,77,3205	0/0:18,0:18:48.16:0,48,2673	0/0:28,0:28:57.20:0,57,3117	0/0:20,0:20:39.13:0,39,1927	0/1:19,10:29:99:254,0,2742	0/0:25,0:24:72.16:0,72,4028	0/0:34,0:34:96.33:0,96,5631	0/0:16,0:16:42.14:0,42,2392	0/0:33,0:33:90.30:0,90,5127	0/0:21,0:21:63.19:0,63,3142	0/0:24,0:24:69.24:0,69,3905	0/0:22,0:22:66.21:0,66,3516	0/0:15,0:15:39.13:0,39,2091	0/0:39,0:39:99:0,108,6091	0/0:31,0:31:88.99:0,89,4659	0/0:36,0:34:98.46:0,98,4888	0/0:23,0:23:65.95:0,66,3737	0/0:23,0:23:66.23:0,66,3797	0/0:24,0:24:69.24:0,69,3824	0/0:17,0:17:51.11:0,51,3117	0/0:37,0:37:99:0,102,6107	0/0:28,0:28:84.29:0,84,4987	0/0:24,0:24:72.24:0,72,3975	0/0:26,0:26:75.26:0,75,4503	0/0:11,0:11:33.11:0,33,2106
chr10	47831336	.	GAGAA	G	1376.57	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.895;DP=740;FS=1.424;HRun=0;HaplotypeScore=126.0670;InbreedingCoeff=0.9990;MQ=68.48;MQ0=3;MQRankSum=-1.096;QD=29.29;ReadPosRankSum=3.526;VQSLOD=3.8548;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,45:47:84.29:1471,84,0	0/0:11,0:11:30.10:0,30,676	0/0:29,0:21:51.56:0,52,786	0/0:50,0:38:48.35:0,48,1348	0/0:16,0:16:48.13:0,48,1003	0/0:28,0:28:57.20:0,57,1138	0/0:20,0:20:39.13:0,39,689	0/0:27,0:27:62.82:0,63,1156	0/0:25,0:24:62.70:0,63,1428	0/0:34,0:34:96.31:0,96,2166	0/0:15,0:15:40.67:0,41,830	0/0:31,0:31:84.28:0,84,1895	0/0:22,0:22:54.14:0,54,1154	0/0:24,0:24:63.14:0,63,1417	0/0:23,0:23:63.20:0,63,1341	0/0:15,0:15:36.11:0,36,767	0/0:40,0:40:95.81:0,96,2142	0/0:32,0:31:62.81:0,63,1663	0/0:37,0:35:92.51:0,93,1867	0/0:23,0:23:63.07:0,63,1389	0/0:24,0:24:64.39:0,64,1395	0/0:23,0:23:69.22:0,69,1399	0/0:17,0:17:48.16:0,48,1117	0/0:38,0:38:99:0,104,2273	0/0:28,0:28:78.68:0,79,1752	0/0:24,0:24:63.22:0,63,1446	0/0:26,0:26:68.52:0,69,1569	0/0:11,0:11:33.11:0,33,760
chr10	47833402	.	TGG	T	2437.93	PASS	AB=0.721;AC=40;AF=0.714;AN=56;BaseQRankSum=-2.012;DP=261;FS=4.326;HRun=10;HaplotypeScore=43.3148;InbreedingCoeff=0.6455;MQ=68.04;MQ0=4;MQRankSum=-1.330;QD=12.83;ReadPosRankSum=2.645;VQSLOD=0.5450;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,0:13:13.72:60,14,0	1/1:0,1:1:3.01:33,3,0	0/1:11,0:8:6.99:7,0,71	0/0:12,0:5:7.87:0,8,99	1/1:1,0:9:11.17:55,11,0	1/1:2,15:17:36.09:401,36,0	1/1:2,9:11:24.06:267,24,0	0/1:4,0:8:1.86:8,0,2	1/1:2,9:11:21.05:234,21,0	1/1:1,0:14:32.78:137,33,0	1/1:0,0:3:5.49:24,5,0	1/1:5,14:18:36.08:393,36,0	1/1:0,9:9:24.06:267,24,0	0/0:2,0:14:20.46:0,20,84	1/1:2,6:8:12.03:134,12,0	1/1:2,0:5:7.30:29,7,0	0/1:2,0:11:5.27:53,0,5	1/1:0,0:3:5.49:24,5,0	0/0:4,0:9:12.66:0,13,46	0/0:0,0:7:14.70:0,15,50	0/0:8,0:20:25.71:0,26,110	1/1:0,3:3:9.02:100,9,0	1/1:2,5:7:12.03:133,12,0	1/1:4,7:11:12.02:134,12,0	0/1:1,0:2:0:0,0,0	1/1:2,0:8:11.59:52,12,0	0/0:3,0:9:23.46:0,23,110	1/1:0,0:6:16.47:72,16,0
chr10	47834465	.	C	CACA	921.64	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-2.676;DP=668;FS=0.000;HRun=0;HaplotypeScore=120.2977;InbreedingCoeff=0.9964;MQ=81.53;MQ0=0;MQRankSum=-3.135;QD=51.20;ReadPosRankSum=-0.892;VQSLOD=5.1716;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,129,2093	0/0:11,0:11:27.09:0,27,450	0/0:26,0:26:74.96:0,75,1101	0/0:22,0:21:38.79:0,39,784	0/0:16,0:16:34.55:0,35,597	0/0:28,0:28:69.22:0,69,1123	0/0:29,0:29:63.22:0,63,1047	0/0:31,0:31:78.27:0,78,1298	0/0:27,0:27:78.23:0,78,1243	0/0:21,0:21:57.19:0,57,933	0/0:15,0:15:39.13:0,39,650	0/0:26,0:26:75.26:0,75,1249	0/0:20,0:20:54.17:0,54,874	0/0:36,0:36:99:0,105,1740	0/0:19,0:19:51.17:0,51,842	1/1:4,14:18:51.09:1017,51,0	0/0:20,0:20:54.18:0,54,899	0/0:17,0:17:48.16:0,48,799	0/0:22,0:22:57.19:0,57,950	0/0:20,0:20:54.18:0,54,896	0/0:48,0:48:99:0,138,2244	0/0:19,0:19:54.18:0,54,898	0/0:12,0:12:33.11:0,33,546	0/0:46,0:46:99:0,135,2190	0/0:19,0:19:51.16:0,51,805	0/0:29,0:29:84.21:0,84,1333	0/0:16,0:16:42.14:0,42,695	0/0:11,0:11:24.08:0,24,400
chr10	47834518	.	G	GAAGGGCTGAGT	37980.89	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-5.695;DP=656;FS=3.467;HRun=0;HaplotypeScore=195.2619;InbreedingCoeff=0.9888;MQ=77.07;MQ0=0;MQRankSum=-18.362;QD=119.81;ReadPosRankSum=-1.217;VQSLOD=4.5881;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,117,4025	1/1:4,1:5:15.05:609,15,0	0/0:19,0:19:51.13:0,51,1635	0/0:20,0:20:51.11:0,51,1601	1/1:8,2:13:12.03:582,12,0	1/1:7,15:23:60.16:3167,60,0	1/1:21,11:36:87.26:4268,87,0	1/1:34,10:51:99:6062,141,0	0/0:26,0:26:78.27:0,78,2752	1/1:15,9:28:81.23:3851,81,0	1/1:5,4:11:21.07:1006,21,0	0/0:28,0:28:78.24:0,78,2477	0/0:15,0:15:45.15:0,45,1506	0/0:30,0:30:84.25:0,84,2784	1/1:8,15:28:60.21:3232,60,0	1/1:8,11:22:57.20:2906,57,0	1/1:6,9:16:42.14:2308,42,0	1/1:11,11:25:57.11:2696,57,0	0/0:23,0:23:63.21:0,63,2104	0/0:13,0:13:36.12:0,36,1271	0/0:39,0:39:99:0,111,3539	0/0:19,0:19:54.17:0,54,1808	0/0:16,0:16:48.16:0,48,1694	0/0:33,0:33:87.28:0,87,2974	1/1:9,7:21:36.08:1835,36,0	1/1:7,22:33:96.30:4772,96,0	0/0:16,0:16:45.12:0,45,1425	1/1:1,3:5:12.04:686,12,0
chr10	47836534	.	AT	A	775.90	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.717;DP=693;FS=2.547;HRun=6;HaplotypeScore=67.1544;InbreedingCoeff=0.9997;MQ=85.14;MQ0=0;MQRankSum=-0.687;QD=25.86;ReadPosRankSum=-4.029;VQSLOD=2.0197;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:57:99:0,159,2041	0/0:13,0:13:36.12:0,36,473	0/0:27,0:27:65.77:0,66,788	0/0:17,0:17:39.12:0,39,476	0/0:22,0:22:66.19:0,66,839	0/0:24,0:24:69.22:0,69,907	0/0:26,0:26:69.22:0,69,908	1/1:3,27:30:81.20:871,81,0	0/0:30,0:30:84.27:0,84,1105	0/0:18,0:18:51.17:0,51,671	0/0:15,0:15:45.13:0,45,577	0/0:38,0:38:99:0,102,1342	0/0:24,0:24:63.19:0,63,809	0/0:24,0:24:69.22:0,69,905	0/0:21,0:21:57.19:0,57,750	0/0:29,0:29:84.27:0,84,1105	0/0:30,0:30:87.28:0,87,1145	0/0:16,0:16:45.15:0,45,591	0/0:27,0:27:75.24:0,75,983	0/0:23,0:23:69.22:0,69,906	0/0:29,0:29:84.26:0,84,1089	0/0:25,0:25:60.18:0,60,776	0/0:15,0:15:45.15:0,45,592	0/0:31,0:31:87.23:0,87,1111	0/0:16,0:16:45.15:0,45,591	0/0:18,0:18:51.17:0,51,671	0/0:31,0:31:75.24:0,75,986	0/0:17,0:17:45.15:0,45,592
chr10	47837143	.	CCA	C	5431.65	PASS	AB=0.904;AC=32;AF=0.571;AN=56;BaseQRankSum=11.297;DP=750;FS=24.820;HRun=0;HaplotypeScore=89.1384;InbreedingCoeff=0.4687;MQ=64.36;MQ0=23;MQRankSum=1.256;QD=9.98;ReadPosRankSum=1.617;VQSLOD=2.8557;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:39,2:41:18.45:0,18,1400	1/1:0,5:5:15.05:178,15,0	0/0:49,0:23:17.72:0,18,159	0/1:54,0:24:1.36:1,0,140	0/0:15,0:15:36.04:0,36,527	1/1:4,15:19:32.42:365,32,0	1/1:8,26:34:48.15:569,48,0	1/1:16,11:27:34.82:363,35,0	1/1:13,18:32:54.14:626,54,0	0/0:22,0:22:12.70:0,13,646	0/1:7,1:8:17.50:17,0,203	1/1:15,21:36:52.01:776,52,0	1/1:8,16:22:21.06:249,21,0	0/0:33,0:32:63.21:0,63,967	1/1:9,17:26:47.63:542,48,0	1/1:2,22:25:44.97:512,45,0	0/1:21,5:25:49.45:49,0,694	0/1:37,4:42:42.91:43,0,1231	0/0:17,0:16:24.08:0,24,353	0/1:15,2:17:2.45:2,0,435	0/1:61,0:59:40.73:41,0,1680	1/1:4,7:11:18.53:214,19,0	1/1:2,6:9:23.73:235,24,0	1/1:7,25:32:47.63:542,48,0	0/1:18,4:22:25.95:26,0,566	0/0:17,0:17:36.07:0,36,522	0/1:24,4:29:81.02:81,0,866	0/0:12,0:11:27.09:0,27,414
chr10	47839633	.	T	TC	13026.97	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=19.577;DP=680;FS=9.593;HRun=0;HaplotypeScore=225.2783;InbreedingCoeff=0.9930;MQ=88.00;MQ0=0;MQRankSum=-19.264;QD=29.01;ReadPosRankSum=1.428;VQSLOD=3.0841;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,24:24:63.12:637,63,0	1/1:1,7:9:25.64:231,26,0	0/0:29,0:29:63.40:0,63,1097	0/0:38,0:38:94.76:0,95,1223	1/1:0,26:30:60.05:571,60,0	1/1:1,14:15:45.10:471,45,0	1/1:2,11:13:39.07:405,39,0	1/1:3,28:31:93.24:1095,93,0	1/1:3,16:19:54.12:578,54,0	1/1:1,23:24:72.22:884,72,0	1/1:1,15:16:42.06:421,42,0	1/1:2,26:28:84.14:857,84,0	1/1:0,23:23:69.13:699,69,0	0/0:29,0:29:81.25:0,81,1099	1/1:2,27:29:84.16:858,84,0	1/1:0,22:22:66.14:678,66,0	1/1:6,24:30:70.33:712,70,0	1/1:1,6:7:21.04:224,21,0	0/0:21,0:21:60.20:0,60,839	0/0:28,0:28:84.28:0,84,1169	0/0:56,0:56:99:0,160,2220	1/1:1,25:28:73.14:728,73,0	1/1:4,25:29:81.13:824,81,0	1/1:2,9:11:11.71:115,12,0	1/1:1,21:22:66.13:667,66,0	1/1:3,24:27:81.24:971,81,0	0/0:30,0:30:87.26:0,87,1179	1/1:0,12:12:36.10:402,36,0
chr10	47839636	.	TTA	T	10779.71	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=20.553;DP=666;FS=3.952;HRun=0;HaplotypeScore=243.7109;InbreedingCoeff=0.9739;MQ=87.37;MQ0=0;MQRankSum=-20.145;QD=24.56;ReadPosRankSum=2.895;VQSLOD=4.9048;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,21:23:63.07:580,63,0	1/1:2,7:9:27.02:246,27,0	0/0:27,0:27:68.10:0,68,1400	0/0:38,0:38:99:0,108,1989	1/1:4,26:30:60.05:560,60,0	1/1:0,14:14:42.05:388,42,0	1/1:0,11:11:33.04:306,33,0	1/1:2,28:30:86.40:738,86,0	1/1:3,17:20:56.58:493,57,0	1/1:1,23:24:62.07:604,62,0	1/1:2,15:17:39.18:371,39,0	1/1:1,27:28:84.05:758,84,0	1/1:1,23:24:71.67:649,72,0	0/0:30,0:30:90.31:0,90,1743	1/1:1,27:28:76.77:713,77,0	1/1:0,23:23:69.06:629,69,0	1/1:3,24:27:59.85:544,60,0	1/1:0,6:6:18:157,18,0	0/0:21,0:21:63.22:0,63,1258	0/0:26,0:26:78.27:0,78,1582	0/0:56,0:56:99:0,169,3315	1/1:1,25:26:78.09:722,78,0	1/1:2,25:27:74.73:678,75,0	1/1:3,9:12:4.57:46,5,0	1/1:1,21:22:66.07:606,66,0	1/1:2,24:26:77.95:669,78,0	0/0:29,0:29:84.27:0,84,1653	1/1:0,12:12:36.01:322,36,0
chr10	47839637	.	TA	T	9963.52	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=20.512;DP=667;FS=2.969;HRun=1;HaplotypeScore=235.4421;InbreedingCoeff=0.9784;MQ=87.38;MQ0=1;MQRankSum=-19.855;QD=22.64;ReadPosRankSum=2.510;VQSLOD=4.7291;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:23:62.92:517,63,0	1/1:8,1:9:26.97:221,27,0	0/0:28,0:28:77.54:0,78,1210	0/0:36,0:36:99:0,105,1573	1/1:30,0:30:59.89:484,60,0	1/1:14,0:14:41.95:345,42,0	1/1:11,0:11:32.96:272,33,0	1/1:31,0:31:92.39:786,92,0	1/1:20,0:20:56.48:448,56,0	1/1:23,1:24:71.88:626,72,0	1/1:15,1:16:41.93:353,42,0	1/1:28,0:28:83.89:689,84,0	1/1:24,0:24:68.88:561,69,0	0/0:30,0:30:90.29:0,90,1404	1/1:27,0:27:77.89:635,78,0	1/1:24,0:24:71.44:582,71,0	1/1:25,1:26:62.17:504,62,0	1/1:6,0:6:18:160,18,0	0/0:22,0:22:66.22:0,66,1031	0/0:26,0:26:78.27:0,78,1246	0/0:57,0:57:99:0,172,2672	1/1:26,1:27:80.39:631,80,0	1/1:27,0:27:71.81:571,72,0	1/1:11,0:11:5.74:54,6,0	1/1:22,0:22:65.92:540,66,0	1/1:27,0:27:80.61:677,81,0	0/0:28,0:28:84.27:0,84,1316	1/1:12,0:12:35.99:310,36,0
chr10	47839639	.	CA	C	10034.79	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=20.282;DP=663;FS=0.301;HRun=2;HaplotypeScore=233.2483;InbreedingCoeff=0.9782;MQ=86.33;MQ0=1;MQRankSum=-19.820;QD=22.86;ReadPosRankSum=2.084;VQSLOD=4.4475;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,21:22:62.90:515,63,0	1/1:0,9:9:26.94:217,27,0	0/0:26,0:26:72.24:0,72,1066	0/0:35,0:35:99:0,99,1405	1/1:3,26:29:59.82:474,60,0	1/1:0,14:14:41.95:347,42,0	1/1:0,11:11:32.97:275,33,0	1/1:4,28:33:98.82:865,99,0	1/1:3,16:19:56.55:444,57,0	1/1:1,23:24:68:615,68,0	1/1:1,15:16:41.87:332,42,0	1/1:1,26:27:80.72:652,81,0	1/1:2,23:25:71.66:576,72,0	0/0:30,0:30:90.30:0,90,1349	1/1:0,27:27:77.86:634,78,0	1/1:4,22:26:77.80:638,78,0	1/1:2,24:26:63.73:510,64,0	1/1:0,6:6:18:160,18,0	0/0:23,0:23:69.22:0,69,997	0/0:26,0:26:78.25:0,78,1148	0/0:57,0:57:99:0,169,2494	1/1:2,26:28:83.70:657,84,0	1/1:1,25:26:71.64:567,72,0	1/1:2,9:11:5.69:43,6,0	1/1:1,21:22:65.93:547,66,0	1/1:1,24:25:75:654,75,0	0/0:27,0:27:81.26:0,81,1191	1/1:0,12:12:35.99:313,36,0
chr10	47839640	.	A	AGTC	23749.59	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=19.892;DP=740;FS=0.000;HRun=0;HaplotypeScore=242.8303;InbreedingCoeff=0.9931;MQ=82.47;MQ0=1;MQRankSum=-19.892;QD=46.12;ReadPosRankSum=0.477;VQSLOD=4.8580;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:26,1:26:69.23:1125,69,0	1/1:15,0:15:39.06:635,39,0	0/0:27,0:27:72.20:0,72,1299	0/0:34,0:34:99:0,99,1692	1/1:32,0:32:66.22:1035,66,0	1/1:15,0:15:45.15:729,45,0	1/1:16,0:16:45.15:793,45,0	1/1:37,0:37:99:2055,108,0	1/1:20,1:21:63.21:1091,63,0	1/1:28,1:29:87.30:1749,87,0	1/1:18,1:19:45.15:717,45,0	1/1:31,1:32:93.32:1559,93,0	1/1:29,0:29:84.28:1380,84,0	0/0:30,0:30:90.31:0,90,1678	1/1:30,0:30:87.30:1400,87,0	1/1:29,1:30:84.27:1409,84,0	1/1:30,1:31:74.94:1261,75,0	1/1:7,0:7:21.07:394,21,0	0/0:23,0:23:69.22:0,69,1228	0/0:27,0:27:78.25:0,78,1422	0/0:56,0:56:99:0,169,3075	1/1:34,0:34:90.28:1389,90,0	1/1:30,0:30:84.28:1347,84,0	1/1:13,0:13:11.63:191,12,0	1/1:25,1:26:75.26:1248,75,0	1/1:29,0:29:84.29:1544,84,0	0/0:28,0:28:81.26:0,81,1465	1/1:13,0:13:39.13:699,39,0
chr10	47841232	.	GCACACACA	G	929.23	PASS	AB=1.000;AC=15;AF=0.357;AN=42;BaseQRankSum=5.962;DP=581;FS=3.405;HRun=0;HaplotypeScore=170.2303;InbreedingCoeff=0.7012;MQ=66.96;MQ0=13;MQRankSum=-5.920;QD=6.19;ReadPosRankSum=0.366;VQSLOD=2.8078;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:28:3.43:3,0,241	./.	./.	./.	0/0:21,0:21:18.03:0,18,561	0/0:18,0:19:21.07:0,21,583	0/0:32,0:32:27.08:0,27,942	0/0:29,0:29:4.37:0,4,72	1/1:18,1:18:2.79:72,3,0	0/0:18,0:18:24.08:0,24,890	0/0:15,0:16:3.48:0,3,42	1/1:5,6:13:9.03:205,9,0	1/1:12,2:14:3.01:64,3,0	1/1:15,0:23:17.55:277,18,0	0/0:13,0:18:27.09:0,27,945	0/0:11,0:17:8.07:0,8,280	0/0:17,0:24:12.04:0,12,368	0/0:19,0:23:33.95:0,34,988	./.	1/1:6,0:15:8.92:110,9,0	./.	1/1:15,4:21:2.99:72,3,0	./.	./.	0/0:18,0:18:24.08:0,24,876	0/0:23,0:22:24.08:0,24,818	1/1:10,0:17:15.05:279,15,0	0/0:6,0:6:15.05:0,15,456
chr10	47841789	.	AAGG	A	15375.08	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=16.907;DP=789;FS=12.714;HRun=0;HaplotypeScore=119.8623;InbreedingCoeff=0.9994;MQ=81.28;MQ0=0;MQRankSum=-4.236;QD=41.67;ReadPosRankSum=5.970;VQSLOD=5.6367;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,120,2690	0/0:14,0:14:39.13:0,39,844	0/0:24,0:24:66.21:0,66,1420	0/0:20,0:20:54.18:0,54,1138	1/1:2,15:17:42.14:699,42,0	0/0:13,0:13:36.12:0,36,810	0/0:50,0:50:99:0,148,3331	0/0:24,0:24:63.19:0,63,1331	1/1:1,26:27:78.27:1299,78,0	1/1:2,27:29:75.21:1169,75,0	1/1:3,7:10:21.07:350,21,0	1/1:1,50:51:99:2099,126,0	1/1:3,30:33:93.32:1545,93,0	0/0:31,0:31:90.31:0,90,2030	0/0:48,0:48:99:0,138,3103	0/0:32,0:32:93.32:0,93,2071	1/1:2,39:41:99:1699,102,0	1/1:4,21:25:57.19:950,57,0	0/0:23,0:23:66.23:0,66,1402	0/0:24,0:24:63.22:0,63,1410	0/0:52,0:52:99:0,151,3378	1/1:4,20:24:48.16:799,48,0	1/1:0,16:16:45.15:749,45,0	1/1:1,39:40:99:1749,105,0	1/1:4,16:20:39.13:649,39,0	1/1:3,22:25:66.21:1071,66,0	0/0:23,0:23:69.24:0,69,1544	1/1:1,10:11:33.11:548,33,0
chr10	47848923	.	CT	C	1502.92	PASS	AB=0.846;AC=20;AF=0.357;AN=56;BaseQRankSum=-0.942;DP=576;FS=0.000;HRun=15;HaplotypeScore=69.9551;InbreedingCoeff=0.4043;MQ=69.90;MQ0=8;MQRankSum=2.026;QD=5.20;ReadPosRankSum=4.709;VQSLOD=2.1328;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,1:33:35.24:0,35,424	0/1:5,3:8:9.22:67,0,9	0/1:40,0:20:3.65:4,0,64	0/0:21,1:11:5.32:0,5,19	1/1:15,6:23:23.18:142,23,0	0/1:21,1:24:15.99:16,0,133	0/0:21,1:23:28.01:0,28,354	0/0:29,2:34:19.08:0,19,391	0/0:17,0:17:33.28:0,33,255	1/1:12,13:26:39.95:249,40,0	0/1:7,3:10:7.26:51,0,7	0/0:15,1:16:13.46:0,13,209	0/0:7,0:7:8.90:0,9,63	0/0:20,0:20:1.36:0,1,3	0/1:10,16:26:6.87:207,0,7	0/0:19,0:20:34.43:0,34,282	1/1:25,21:47:16.07:320,16,0	1/1:10,12:20:34.75:226,35,0	0/0:19,0:18:1.32:0,1,41	0/1:13,0:13:5.78:6,0,38	0/0:9,0:9:2.63:0,3,9	0/0:15,0:15:6.57:0,7,145	0/0:14,1:15:23.87:0,24,191	0/0:7,1:9:1.32:0,1,112	1/1:6,11:16:0.05:111,0,0	1/1:8,10:18:27.05:180,27,0	0/0:25,0:24:2.70:0,3,19	1/1:4,10:13:16.81:102,17,0
chr10	47848937	.	TTC	T	862.66	PASS	AB=0.993;AC=14;AF=0.250;AN=56;BaseQRankSum=2.960;DP=563;FS=52.989;HRun=0;HaplotypeScore=77.3734;InbreedingCoeff=0.5272;MQ=59.72;MQ0=15;MQRankSum=-2.348;QD=5.39;ReadPosRankSum=-3.852;VQSLOD=-0.2078;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:33:36:0,36,631	0/1:10,0:10:6.70:7,0,109	0/1:35,1:11:13.46:13,0,97	0/0:26,0:11:11.30:0,11,65	0/0:19,1:20:21.31:0,21,133	0/1:22,0:22:29.76:30,0,241	0/0:21,0:21:56.52:0,57,635	0/0:36,0:35:53.44:0,53,761	0/0:13,0:13:17.76:0,18,350	0/0:21,0:21:25.61:0,26,237	0/1:11,0:11:39.44:39,0,55	0/0:18,0:18:13.85:0,14,267	0/0:9,0:9:14.03:0,14,159	1/1:3,12:15:5.80:32,6,0	0/0:23,0:23:31.73:0,32,228	0/0:18,0:18:20.17:0,20,422	0/0:45,0:44:24.59:0,25,252	0/0:28,0:25:8.82:0,9,157	1/1:4,10:12:27.15:183,27,0	1/1:16,3:19:48.52:349,49,0	1/1:5,4:9:23.48:231,23,0	0/0:13,0:13:31.33:0,31,306	0/0:16,0:16:27.78:0,28,303	0/0:11,0:9:6.85:0,7,174	0/0:19,0:18:0.33:0,0,101	0/0:14,0:14:8.25:0,8,165	1/1:8,16:22:17.95:156,18,0	0/0:17,0:14:17.47:0,17,100
chr10	47848938	.	TC	T	1352.64	PASS	AB=0.938;AC=22;AF=0.393;AN=56;BaseQRankSum=1.784;DP=557;FS=157.207;HRun=1;HaplotypeScore=67.6950;InbreedingCoeff=0.0494;MQ=59.59;MQ0=15;MQRankSum=-1.870;QD=4.04;ReadPosRankSum=-2.713;VQSLOD=-0.6391;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:33:22.84:0,23,420	0/1:9,1:10:47.39:47,0,56	0/1:36,1:11:36.94:37,0,56	0/0:24,1:11:10.59:0,11,46	0/1:17,1:18:22.27:22,0,77	0/1:22,0:22:77.13:77,0,147	0/0:19,0:19:52.59:0,53,430	0/0:37,0:36:36.26:0,36,563	0/0:13,0:13:14.21:0,14,252	0/1:20,1:21:51.03:51,0,149	0/1:13,1:14:22.74:87,0,23	0/0:18,0:18:7.34:0,7,167	0/1:9,0:9:6.41:6,0,127	1/1:13,2:15:5.88:36,6,0	0/1:23,1:24:22.99:23,0,70	0/0:18,0:18:14.85:0,15,296	0/1:35,7:41:99:104,0,108	0/1:24,4:25:55.19:90,0,55	1/1:11,1:10:27.98:209,28,0	1/1:17,2:19:47.49:335,47,0	1/1:9,0:9:23.75:173,24,0	0/0:11,2:13:15.65:0,16,223	0/0:15,0:15:10.21:0,10,201	0/0:11,0:9:5.11:0,5,117	0/1:18,2:19:49.09:49,0,49	0/1:13,1:14:51.89:52,0,92	1/1:18,3:19:19.82:136,20,0	0/0:17,0:14:10.33:0,10,67
chr10	47849893	.	T	TGG	3172.97	PASS	AB=0.712;AC=39;AF=0.696;AN=56;BaseQRankSum=9.188;DP=612;FS=4.220;HRun=9;HaplotypeScore=121.0973;InbreedingCoeff=0.4109;MQ=69.60;MQ0=0;MQRankSum=-1.025;QD=6.45;ReadPosRankSum=0.415;VQSLOD=0.4864;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:63.11:0,63,656	0/0:15,0:15:36.08:0,36,383	0/1:15,0:14:6.46:6,0,177	0/1:12,0:11:33.15:33,0,93	0/1:10,0:30:24.92:83,0,25	0/0:23,0:23:54.04:0,54,558	0/0:25,0:26:60.06:0,60,686	1/1:13,7:21:0.57:192,1,0	1/1:9,0:18:17.75:66,18,0	1/1:10,0:29:33.45:150,33,0	1/1:9,1:27:37.49:160,37,0	0/1:7,0:20:3.61:58,0,4	1/1:8,0:27:16.49:132,16,0	1/1:5,10:15:18.06:277,18,0	0/0:30,0:30:80.88:0,81,836	0/1:6,0:21:33.64:54,0,34	1/1:6,0:38:72.24:248,72,0	1/1:2,0:16:29.94:103,30,0	1/1:9,11:23:39.93:453,40,0	1/1:7,9:16:18.06:266,18,0	1/1:5,1:10:2.49:9,2,0	0/1:11,0:26:39.49:39,0,67	1/1:6,0:23:29.18:102,29,0	0/1:7,0:18:4.09:58,0,4	1/1:9,0:27:32.44:112,32,0	1/1:11,0:22:26.08:89,26,0	1/1:7,14:26:47.08:609,47,0	1/1:3,0:10:17.47:60,17,0
chr10	47850901	.	G	GTTT	11246.10	PASS	AB=1.000;AC=44;AF=0.786;AN=56;BaseQRankSum=-2.515;DP=712;FS=2.414;HRun=12;HaplotypeScore=124.1072;InbreedingCoeff=0.8267;MQ=70.47;MQ0=13;MQRankSum=-1.978;QD=18.87;ReadPosRankSum=0.772;VQSLOD=3.4297;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:89.70:0,90,396	0/0:13,0:13:29.95:0,30,311	0/1:32,0:20:1.50:1,0,28	0/1:37,0:23:16.16:16,0,115	1/1:20,0:20:44.22:448,44,0	0/0:13,0:13:24.53:0,25,268	0/0:20,0:23:43.75:0,44,445	1/1:29,0:27:44.92:444,45,0	1/1:20,0:19:30.10:405,30,0	1/1:29,0:27:44.87:426,45,0	1/1:27,0:26:56.84:663,57,0	1/1:20,1:22:35.95:492,36,0	1/1:23,0:23:42.14:568,42,0	1/1:12,4:15:29.99:410,30,0	0/0:17,0:20:48.03:0,48,533	1/1:1,9:12:12.04:208,12,0	1/1:41,0:42:39.79:854,40,0	1/1:27,0:26:29.83:687,30,0	1/1:12,12:27:49.97:524,50,0	1/1:12,14:26:36.65:420,37,0	1/1:8,7:16:12.03:180,12,0	1/1:28,0:26:38.24:537,38,0	1/1:26,0:25:51.47:635,51,0	1/1:19,0:18:36.12:503,36,0	1/1:33,1:34:69.22:889,69,0	1/1:25,0:25:42.62:489,43,0	1/1:29,6:34:56.42:964,56,0	1/1:17,0:17:39.12:482,39,0
chr10	47850902	.	T	TC	1211.24	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-7.735;DP=703;FS=6.130;HRun=0;HaplotypeScore=136.3985;InbreedingCoeff=0.8336;MQ=69.34;MQ0=14;MQRankSum=1.375;QD=25.77;ReadPosRankSum=2.086;VQSLOD=3.8942;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,42:47:98.27:1306,98,0	0/0:13,0:13:39.10:0,39,494	0/0:30,1:18:3.91:0,4,221	0/0:37,0:23:41.25:0,41,346	0/0:20,0:20:52.42:0,52,329	0/0:12,0:11:31.62:0,32,385	0/0:23,0:23:61.62:0,62,724	0/0:28,0:26:42.46:0,42,352	0/0:22,0:20:45.92:0,46,300	0/0:29,0:27:73.50:0,74,536	0/0:27,0:26:63.14:0,63,386	0/0:22,0:22:41.71:0,42,243	0/0:22,0:22:52.33:0,52,332	0/0:17,0:16:35.74:0,36,245	0/0:20,0:20:50.27:0,50,664	0/0:11,0:11:10.49:0,10,47	0/0:42,0:42:93.35:0,93,594	0/0:27,0:26:66.54:0,67,418	0/0:27,0:25:52.98:0,53,361	0/0:25,0:25:58.54:0,59,402	0/0:15,0:15:22.26:0,22,144	0/0:27,0:24:65.08:0,65,397	0/0:26,0:25:47.47:0,47,242	0/0:20,0:18:33.97:0,34,181	0/0:35,0:34:86.51:0,87,526	0/0:25,1:26:35.33:0,35,462	0/0:35,0:34:95.04:0,95,678	0/0:17,0:17:39.86:0,40,213
chr10	47850909	.	T	TTTG	13698.93	PASS	AB=0.926;AC=33;AF=0.589;AN=56;BaseQRankSum=-10.552;DP=726;FS=1.517;HRun=0;HaplotypeScore=113.2200;InbreedingCoeff=0.4774;MQ=64.39;MQ0=19;MQRankSum=-1.134;QD=27.07;ReadPosRankSum=7.561;VQSLOD=4.5993;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:50:99:0,129,1128	0/0:14,0:14:36.10:0,36,502	0/0:30,0:15:30.22:0,30,199	0/0:33,0:19:23.87:0,24,232	1/1:2,19:24:53.81:772,54,0	0/0:13,0:12:35.52:0,36,446	0/0:26,0:26:60.18:0,60,779	0/0:30,0:28:12.41:0,12,231	1/1:2,19:19:30.09:607,30,0	1/1:7,21:27:38.25:859,38,0	1/1:3,22:27:60.10:1078,60,0	1/1:4,18:22:38.67:682,39,0	1/1:1,19:21:42.12:843,42,0	0/1:17,0:16:79.40:133,0,79	0/0:23,0:22:62.86:0,63,830	0/1:15,0:14:35.41:88,0,35	1/1:7,36:49:5.44:1270,5,0	0/1:6,22:28:7.22:1012,0,7	0/1:25,0:23:89.31:89,0,95	0/1:22,0:22:13.28:132,0,13	0/1:12,0:13:29.73:82,0,30	1/1:7,20:24:47.41:925,47,0	1/1:1,25:28:51.89:999,52,0	1/1:5,19:20:36.59:717,37,0	1/1:3,27:29:69.21:1325,69,0	1/1:3,21:26:26.85:1015,27,0	0/1:36,0:35:94.53:303,0,95	1/1:2,15:17:39.12:767,39,0
chr10	47850911	.	T	TTTTG	1517.42	PASS	AB=1.000;AC=18;AF=0.321;AN=56;BaseQRankSum=-0.056;DP=709;FS=17.611;HRun=0;HaplotypeScore=162.8782;InbreedingCoeff=-0.0026;MQ=61.79;MQ0=21;MQRankSum=-4.875;QD=4.10;ReadPosRankSum=-0.525;VQSLOD=1.5420;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:49:99:0,128,1161	0/0:13,0:13:33.01:0,33,456	0/0:26,0:12:18.58:0,19,116	0/0:31,0:18:6.50:0,6,165	0/0:22,0:22:26.12:0,26,189	0/0:13,0:12:31.60:0,32,444	0/0:25,0:25:64.16:0,64,806	1/1:7,21:29:69.20:988,69,0	0/1:21,0:19:5.05:5,0,29	0/0:30,0:27:42.09:0,42,307	0/0:27,0:26:7.77:0,8,109	0/1:20,0:20:7.61:40,0,8	0/1:20,0:20:10.67:11,0,12	0/1:17,0:16:56.75:65,0,57	0/0:24,0:23:62.93:0,63,881	0/1:16,0:15:34.48:74,0,34	0/1:50,0:50:45.78:46,0,138	0/1:29,0:27:26.37:26,0,84	0/1:25,0:23:50.32:128,0,50	0/1:21,0:21:29.01:29,0,115	1/1:13,0:13:8.18:63,8,0	0/0:25,0:22:30.79:0,31,141	0/0:28,0:27:6.98:0,7,32	1/1:26,0:22:2.30:24,2,0	0/1:30,0:28:26.70:39,0,27	0/0:24,0:24:48.26:0,48,327	0/1:35,0:34:64.09:144,0,64	0/1:16,0:16:0.91:1,0,21
chr10	47854455	.	GA	G	5471.95	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=13.416;DP=910;FS=5.529;HRun=3;HaplotypeScore=86.0589;InbreedingCoeff=0.9999;MQ=82.15;MQ0=0;MQRankSum=-2.540;QD=33.16;ReadPosRankSum=1.369;VQSLOD=5.2416;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,126,1776	0/0:17,0:17:51.16:0,51,712	0/0:30,0:30:90.26:0,90,1249	0/0:25,0:25:67.43:0,67,900	0/0:29,0:29:87.26:0,87,1202	0/0:23,0:23:69.21:0,69,973	0/0:36,0:36:99:0,105,1434	0/0:37,0:37:99:0,105,1451	0/0:33,0:33:93.30:0,93,1306	0/0:37,0:37:99:0,99,1372	0/0:25,0:25:72.23:0,72,1007	0/0:46,0:46:99:0,138,1965	0/0:35,0:35:99:0,105,1479	1/1:1,32:33:96.30:1190,96,0	0/0:33,0:33:99:0,99,1371	0/0:38,0:38:99:0,114,1607	0/0:44,0:44:99:0,129,1756	0/0:32,0:32:90.30:0,90,1289	1/1:2,15:17:45.09:507,45,0	1/1:0,26:26:69.17:838,69,0	1/1:1,59:60:99:1896,153,0	0/0:34,0:34:96.32:0,96,1380	0/0:28,0:28:81.27:0,81,1164	0/0:44,0:44:99:0,126,1774	0/0:34,0:34:99:0,99,1409	0/0:31,0:31:90.30:0,90,1293	1/1:0,29:29:84.26:1041,84,0	0/0:11,0:11:30.10:0,30,432
chr10	47856245	.	AT	A	2295.62	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=10.988;DP=593;FS=0.882;HRun=9;HaplotypeScore=56.6749;InbreedingCoeff=0.9964;MQ=67.36;MQ0=1;MQRankSum=-0.258;QD=21.06;ReadPosRankSum=1.248;VQSLOD=4.3277;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:93.26:0,93,1063	0/0:7,0:7:18.05:0,18,208	0/0:13,0:10:27.07:0,27,300	0/0:16,0:10:23.24:0,23,220	0/0:29,0:29:84.23:0,84,950	0/0:20,0:20:60.14:0,60,661	0/0:22,0:22:54.16:0,54,623	0/0:34,0:34:84.23:0,84,959	0/0:22,0:22:56.83:0,57,626	0/0:27,0:27:66.19:0,66,753	0/0:15,0:15:42.12:0,42,484	0/0:28,0:28:69.20:0,69,796	0/0:22,0:22:53.52:0,54,595	1/1:2,9:11:27.01:247,27,0	0/0:22,0:22:63.18:0,63,719	0/0:20,0:20:51.15:0,51,589	0/0:16,0:16:36.08:0,36,403	0/0:25,0:25:62.52:0,63,726	1/1:1,24:25:66.02:604,66,0	1/1:5,21:26:60.01:549,60,0	1/1:3,26:29:69.03:632,69,0	0/0:13,0:13:33.09:0,33,371	0/0:16,0:16:33.10:0,33,381	0/0:11,0:11:24.04:0,24,255	0/0:23,0:23:66.20:0,66,762	0/0:24,1:25:35.80:0,36,665	1/1:2,16:18:48.02:439,48,0	0/0:21,0:21:63.19:0,63,726
chr10	47857059	.	A	AC	23326.22	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-13.234;DP=706;FS=0.732;HRun=1;HaplotypeScore=65.6086;InbreedingCoeff=0.9995;MQ=83.02;MQ0=0;MQRankSum=-5.248;QD=40.92;ReadPosRankSum=2.839;VQSLOD=5.4372;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,36:36:99:1573,105,0	0/0:8,0:8:23.98:0,24,260	0/0:21,0:21:56.96:0,57,679	0/0:17,0:17:51.13:0,51,627	1/1:1,23:24:66.22:989,66,0	0/0:25,0:25:72.22:0,72,914	0/0:40,0:40:99:0,111,1426	1/1:2,34:36:99:1323,99,0	1/1:1,16:17:45.15:674,45,0	1/1:0,24:24:72.21:1054,72,0	1/1:1,19:20:54.18:801,54,0	1/1:2,32:34:90.30:1340,90,0	1/1:0,23:23:60.20:899,60,0	1/1:1,28:29:78.26:1167,78,0	0/0:25,0:25:75.24:0,75,974	1/1:1,21:22:57.19:854,57,0	1/1:0,35:35:99:1528,102,0	1/1:1,25:26:72.24:1079,72,0	1/1:1,20:21:63.10:898,63,0	1/1:0,16:17:45.15:665,45,0	1/1:1,49:50:99:1978,132,0	1/1:2,20:22:60.20:875,60,0	1/1:0,18:18:54.18:806,54,0	1/1:1,28:29:81.27:1212,81,0	1/1:0,20:20:60.20:899,60,0	1/1:0,35:35:99:1501,102,0	1/1:1,19:20:48.16:719,48,0	1/1:1,11:12:33.11:493,33,0
chr10	47861724	.	T	TATGAGG	1543.30	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-3.777;DP=693;FS=0.000;HRun=0;HaplotypeScore=144.5953;InbreedingCoeff=0.9715;MQ=80.21;MQ0=1;MQRankSum=-4.640;QD=44.09;ReadPosRankSum=-4.833;VQSLOD=2.2765;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:87.15:0,87,1593	0/0:11,0:11:24.02:0,24,401	0/0:21,0:21:23.83:0,24,351	0/0:27,0:27:38.52:0,39,628	0/0:10,0:10:24.06:0,24,428	0/0:35,0:35:75.16:0,75,1401	0/0:30,0:30:69.16:0,69,1243	1/1:18,17:35:72.16:1638,72,0	0/0:25,0:25:57.17:0,57,1162	0/0:29,0:29:41.17:0,41,820	0/0:11,0:11:30.10:0,30,633	0/0:34,0:34:81.28:0,81,1661	0/0:26,0:26:57.10:0,57,1115	0/0:26,0:26:60.21:0,60,1250	0/0:26,0:26:54.17:0,54,1087	0/0:22,0:22:42.14:0,42,848	0/0:24,0:24:51.13:0,51,996	0/0:29,0:29:60.16:0,60,1165	0/0:35,0:35:57.11:0,57,963	0/0:13,0:13:21.07:0,21,427	0/0:64,0:63:99:0,132,2544	0/0:12,0:12:21.05:0,21,363	0/0:17,0:17:24.08:0,24,506	0/0:35,0:35:72.23:0,72,1478	0/0:8,0:8:21.05:0,21,402	0/0:22,0:22:45.08:0,45,848	0/0:16,0:16:36.10:0,36,719	0/0:9,0:9:17.99:0,18,291
chr10	47862974	.	GACAC	G	651.17	PASS	AB=0.909;AC=19;AF=0.413;AN=46;BaseQRankSum=0.563;DP=583;FS=2.157;HRun=0;HaplotypeScore=99.7633;InbreedingCoeff=0.1477;MQ=56.88;MQ0=23;MQRankSum=0.427;QD=2.00;ReadPosRankSum=0.440;VQSLOD=2.0304;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:9.03:0,9,175	0/0:6,0:7:2.74:0,3,12	./.	./.	0/0:8,0:7:2.50:0,2,21	0/0:24,0:23:15.05:0,15,317	0/0:35,0:34:23.31:0,23,356	0/0:18,0:18:0:0,0,0	1/1:15,3:17:5.89:91,6,0	1/1:13,0:13:1.71:5,2,0	0/0:10,0:10:8.58:0,9,97	0/1:27,0:29:28.04:28,0,121	1/1:20,12:33:13.01:207,13,0	1/1:22,0:25:3:28,3,0	0/1:18,0:18:19.79:20,0,56	0/1:19,2:22:10.69:73,0,11	0/1:34,7:42:12.78:120,0,13	0/0:21,0:26:5.89:0,6,24	./.	./.	0/1:46,0:45:60.51:61,0,61	./.	1/1:13,0:13:4.56:48,5,0	0/1:33,9:41:16:83,0,16	0/1:9,0:9:0:0,0,0	0/0:16,0:15:9.17:0,9,61	1/1:11,0:12:3:28,3,0	0/0:7,0:7:2.98:0,3,21
chr10	47864779	.	GCT	G	876.15	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.204;DP=702;FS=2.811;HRun=0;HaplotypeScore=81.2546;InbreedingCoeff=0.9841;MQ=78.44;MQ0=0;MQRankSum=0.479;QD=35.05;ReadPosRankSum=-2.969;VQSLOD=5.0942;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,163,2953	0/0:12,0:12:36.12:0,36,674	0/0:15,0:15:39.13:0,39,664	0/0:17,0:18:35.10:0,35,637	0/0:18,0:18:54.16:0,54,964	0/0:22,0:22:63.22:0,63,1180	0/0:33,0:33:99:0,99,1837	1/1:2,23:25:66.22:971,66,0	0/0:20,0:20:60.19:0,60,1091	0/0:27,0:27:78.26:0,78,1416	0/0:14,0:14:39.13:0,39,730	0/0:38,0:38:99:0,114,2135	0/0:35,0:35:99:0,105,1887	0/0:24,0:24:69.24:0,69,1280	0/0:35,0:35:99:0,105,1904	0/0:28,0:28:84.29:0,84,1554	0/0:26,0:26:78.27:0,78,1461	0/0:18,0:18:54.19:0,54,1011	0/0:31,0:32:93.31:0,93,1653	0/0:14,0:14:42.14:0,42,786	0/0:45,0:45:99:0,129,2336	0/0:21,0:21:63.17:0,63,1077	0/0:21,0:21:63.22:0,63,1176	0/0:28,0:28:78.27:0,78,1449	0/0:23,0:23:69.24:0,69,1280	0/0:26,0:26:78.27:0,78,1457	0/0:25,0:25:75.26:0,75,1404	0/0:5,0:5:15.05:0,15,280
chr10	47869164	.	AAGAGGGAGGG	A	1456.20	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.772;DP=750;FS=0.930;HRun=0;HaplotypeScore=216.3153;InbreedingCoeff=0.9974;MQ=70.54;MQ0=0;MQRankSum=-6.907;QD=44.13;ReadPosRankSum=-0.402;VQSLOD=3.0188;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,26:33:51.17:1551,51,0	0/0:13,0:13:39.13:0,39,2007	0/0:18,0:18:40.02:0,40,1637	0/0:15,0:15:36.02:0,36,1280	0/0:28,0:28:78.27:0,78,3731	0/0:23,0:23:69.24:0,69,3341	0/0:32,0:32:96.31:0,96,4548	0/0:19,0:19:54.18:0,54,2583	0/0:35,0:35:90.19:0,90,4416	0/0:26,0:26:78.27:0,78,3910	0/0:12,0:12:33.11:0,33,1661	0/0:33,0:33:96.33:0,96,4709	0/0:20,0:20:57.20:0,57,2905	0/0:42,0:42:99:0,120,6031	0/0:29,0:29:84.29:0,84,4199	0/0:41,0:41:99:0,114,5953	0/0:31,0:31:87.26:0,87,3682	0/0:24,0:24:69.17:0,69,3171	0/0:27,0:27:75.26:0,75,3593	0/0:15,0:15:45.15:0,45,2251	0/0:84,0:84:99:0,244,12064	0/0:20,0:20:60.21:0,60,2832	0/0:16,0:16:45.15:0,45,2217	0/0:33,0:33:90.31:0,90,4516	0/0:26,0:26:75.23:0,75,3591	0/0:27,0:27:75.26:0,75,3819	0/0:20,0:20:57.20:0,57,2927	0/0:8,0:8:24.06:0,24,1065
chr10	47870025	.	GGGGA	G	872.61	PASS	AB=1.000;AC=12;AF=0.214;AN=56;BaseQRankSum=5.282;DP=324;FS=0.000;HRun=0;HaplotypeScore=61.0743;InbreedingCoeff=0.7101;MQ=68.83;MQ0=5;MQRankSum=-1.140;QD=12.65;ReadPosRankSum=-1.230;VQSLOD=2.1261;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:4:5.98:0,6,88	0/0:4,0:4:12.02:0,12,185	0/0:32,0:13:12.88:0,13,259	0/0:25,0:10:11.64:0,12,224	0/0:8,0:8:24.07:0,24,483	0/0:12,0:12:27.07:0,27,539	0/0:15,0:15:42.07:0,42,797	0/1:6,0:6:29.90:38,0,30	0/0:16,0:16:36.09:0,36,783	0/0:11,0:11:24.55:0,25,520	0/0:8,0:8:21.07:0,21,531	0/0:10,0:10:24.01:0,24,468	0/0:4,0:4:5.99:0,6,49	1/1:8,0:8:16.22:142,16,0	0/0:15,0:15:42.60:0,43,983	0/1:14,0:13:26.90:27,0,207	0/0:17,0:17:42.13:0,42,960	0/0:16,0:16:42.05:0,42,921	1/1:7,0:7:14.91:138,15,0	1/1:7,3:10:20.87:179,21,0	1/1:9,1:10:9.46:103,9,0	0/0:12,0:12:24.49:0,24,579	0/0:12,0:11:27.09:0,27,681	0/0:6,0:6:14.95:0,15,241	0/0:8,0:8:20.97:0,21,355	0/0:10,0:10:27.05:0,27,568	1/1:14,0:13:39.01:421,39,0	0/0:8,0:8:21.02:0,21,396
chr10	47870034	.	GA	G	474.52	PASS	AB=1.000;AC=12;AF=0.214;AN=56;BaseQRankSum=6.291;DP=329;FS=9.125;HRun=1;HaplotypeScore=64.2993;InbreedingCoeff=0.6793;MQ=61.87;MQ0=8;MQRankSum=0.204;QD=7.41;ReadPosRankSum=0.166;VQSLOD=-0.0345;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:6,1:4:2.56:0,3,22	0/0:4,0:4:6.29:0,6,51	0/0:37,0:12:13.18:0,13,149	0/0:25,0:9:13.28:0,13,121	0/1:9,0:9:2.98:3,0,207	0/0:10,0:10:17.04:0,17,192	0/0:12,0:12:17.97:0,18,267	0/0:6,0:5:5.94:0,6,41	0/0:14,0:14:26.80:0,27,298	0/0:9,0:9:18.05:0,18,220	0/0:9,0:9:18:0,18,212	0/0:11,0:11:18.01:0,18,203	1/1:7,0:7:2.23:22,2,0	1/1:8,0:8:14.90:148,15,0	0/0:20,0:20:40.37:0,40,443	0/0:10,0:9:6.13:0,6,110	0/0:16,0:16:32.93:0,33,363	0/0:13,0:13:33.07:0,33,412	1/1:5,0:4:6.01:66,6,0	0/1:7,0:6:0.87:1,0,2	1/1:11,0:11:12.16:75,12,0	0/0:11,0:11:23.68:0,24,328	0/0:17,0:16:30.05:0,30,374	0/0:7,0:7:8.97:0,9,89	0/0:10,0:10:11.97:0,12,135	0/0:10,0:10:20.96:0,21,245	1/1:14,3:16:24.30:313,24,0	0/0:6,0:6:14.85:0,15,181
chr10	47870043	.	G	GA	944.96	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=4.119;DP=362;FS=8.293;HRun=0;HaplotypeScore=70.9072;InbreedingCoeff=0.9220;MQ=59.80;MQ0=7;MQRankSum=-2.399;QD=11.12;ReadPosRankSum=0.566;VQSLOD=3.5171;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:9:8.35:0,8,56	0/0:3,0:3:9.02:0,9,103	0/0:38,0:14:30.57:0,31,256	0/0:27,0:11:7.99:0,8,91	0/0:10,0:10:21.52:0,22,257	0/0:9,0:9:22.29:0,22,249	0/0:12,0:12:29.90:0,30,342	1/1:14,0:13:20.94:178,21,0	0/0:13,0:13:27.48:0,27,337	0/0:8,0:8:18:0,18,206	0/0:10,0:10:20.96:0,21,231	0/0:11,0:11:27.02:0,27,306	0/0:9,0:9:13.31:0,13,96	1/1:2,9:11:17.94:189,18,0	0/0:16,0:16:42.54:0,43,478	1/1:2,0:10:17.40:98,17,0	0/0:14,0:14:41.96:0,42,439	0/0:14,0:14:39.05:0,39,483	1/1:5,2:6:12.02:131,12,0	1/1:6,0:5:6.34:30,6,0	1/1:12,1:13:15.10:125,15,0	0/0:14,0:14:24.08:0,24,335	0/0:16,0:15:33.05:0,33,409	0/0:6,0:6:14.96:0,15,136	0/0:12,0:12:32.67:0,33,301	0/0:14,0:14:38.92:0,39,387	1/1:15,7:22:42.26:384,42,0	0/0:7,0:7:21:0,21,249
chr10	47870080	.	G	GTTTTTTTGT	12067.15	PASS	AB=1.000;AC=36;AF=0.643;AN=56;BaseQRankSum=-0.314;DP=414;FS=0.000;HRun=0;HaplotypeScore=159.7227;InbreedingCoeff=0.7144;MQ=50.75;MQ0=3;MQRankSum=-4.488;QD=42.05;ReadPosRankSum=-1.264;VQSLOD=4.0410;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:16:30.07:843,30,0	0/0:4,0:4:6.02:0,6,149	0/0:21,0:9:8.97:0,9,91	0/0:20,0:6:0.09:0,0,14	1/1:23,0:22:51.14:1090,51,0	0/0:9,0:9:27.08:0,27,630	0/0:10,0:10:8.81:0,9,207	0/0:22,0:20:24.73:0,25,160	1/1:12,1:13:15.05:520,15,0	1/1:14,0:11:24.06:695,24,0	1/1:21,0:21:51.16:1498,51,0	1/1:6,0:6:12.03:228,12,0	1/1:9,0:9:15.05:406,15,0	0/0:16,0:16:23.49:0,23,169	0/0:18,0:16:36.11:0,36,787	1/1:10,0:8:21.03:318,21,0	1/1:14,0:14:17.81:769,18,0	1/1:18,0:16:18.06:413,18,0	0/1:17,0:16:40.71:41,0,117	0/0:6,0:6:11.40:0,11,77	1/1:5,0:5:0.43:1,0,0	1/1:20,0:20:30.10:902,30,0	1/1:20,0:20:45.13:1268,45,0	1/1:5,0:5:6.02:148,6,0	1/1:16,2:18:36.12:931,36,0	1/1:21,1:20:51.04:1197,51,0	0/1:21,0:21:32.54:33,0,86	1/1:12,0:12:24.07:766,24,0
chr10	47870091	.	TTTTTTG	T	2916.49	PASS	AB=0.936;AC=25;AF=0.446;AN=56;BaseQRankSum=-1.305;DP=469;FS=2.738;HRun=0;HaplotypeScore=154.8308;InbreedingCoeff=-0.3258;MQ=41.27;MQ0=16;MQRankSum=-0.986;QD=8.60;ReadPosRankSum=4.861;VQSLOD=2.6420;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:20,1:17:99:174,0,228	0/0:6,0:6:12.04:0,12,265	0/0:24,0:5:2.13:0,2,68	0/0:35,0:5:5.54:0,6,41	0/1:25,2:26:99:233,0,660	0/0:11,0:10:30.08:0,30,680	0/0:9,0:8:9.48:0,9,197	0/0:29,0:25:49.36:0,49,411	0/1:10,0:10:56.42:67,0,56	0/1:19,1:15:69.44:69,0,422	0/1:18,4:21:99:244,0,461	0/1:7,1:7:57.24:78,0,57	0/1:8,1:9:86.53:87,0,130	0/1:17,0:17:80.77:81,0,95	0/0:16,0:14:36.09:0,36,840	0/1:12,0:8:13.15:13,0,227	0/1:11,1:12:99:132,0,147	0/1:19,1:18:99:151,0,170	1/1:17,0:14:38.90:457,39,0	1/1:9,0:6:17.63:212,18,0	1/1:5,0:3:5.97:48,6,0	0/1:15,3:18:99:147,0,366	0/1:21,2:22:99:224,0,337	1/1:7,0:6:1.08:10,1,0	0/1:17,2:19:99:104,0,776	0/1:21,3:21:99:228,0,324	0/1:26,0:24:25.35:235,0,25	0/1:13,0:13:87.10:87,0,227
chr10	47870097	.	G	GTTT	4208.93	PASS	AB=0.890;AC=25;AF=0.446;AN=56;BaseQRankSum=0.714;DP=494;FS=9.147;HRun=8;HaplotypeScore=141.8003;InbreedingCoeff=-0.3620;MQ=36.17;MQ0=23;MQRankSum=-1.263;QD=11.66;ReadPosRankSum=2.172;VQSLOD=0.2218;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:11,11:19:52.20:260,0,52	0/0:6,0:6:12.04:0,12,175	0/0:28,0:4:11.61:0,12,89	0/0:35,0:5:5.77:0,6,47	0/1:25,7:31:99:381,0,213	0/0:12,0:10:30.08:0,30,398	0/0:8,0:7:8.83:0,9,124	0/0:28,0:23:49.68:0,50,470	0/1:3,6:10:16.32:209,0,16	0/1:20,1:15:99:159,0,171	0/1:19,3:20:99:471,0,138	1/1:9,0:8:1.26:134,1,0	0/1:6,4:10:15.62:123,0,16	0/1:15,0:17:19.46:19,0,136	0/0:15,0:13:36.01:0,36,461	0/1:12,0:8:25.47:91,0,25	0/1:11,2:12:58.18:222,0,58	0/1:20,1:19:76.16:253,0,76	0/1:10,0:15:39.28:122,0,39	0/1:10,0:10:19.56:20,0,42	1/1:3,0:3:4.72:32,5,0	0/1:14,3:17:99:289,0,118	0/1:20,3:22:65.67:455,0,66	1/1:7,0:6:1.76:54,2,0	0/1:17,1:18:99:257,0,310	0/1:26,0:23:59.02:333,0,59	0/1:27,0:26:7.09:7,0,119	1/1:10,4:14:2.46:319,2,0
chr10	47870103	.	G	GT	1937.21	PASS	AB=0.958;AC=35;AF=0.625;AN=56;BaseQRankSum=2.319;DP=506;FS=5.357;HRun=14;HaplotypeScore=137.3712;InbreedingCoeff=0.1295;MQ=34.00;MQ0=31;MQRankSum=-4.007;QD=4.94;ReadPosRankSum=-0.337;VQSLOD=1.8435;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:17,2:17:21.36:166,21,0	0/0:5,0:5:11.82:0,12,77	0/0:30,0:4:2.79:0,3,18	0/0:39,0:5:4.98:0,5,25	1/1:20,8:30:7.43:266,7,0	0/1:13,1:11:27.20:27,0,84	0/0:8,0:7:2.90:0,3,19	1/1:29,0:23:5.64:50,6,0	1/1:10,1:9:8.59:44,9,0	1/1:14,6:15:29.80:210,30,0	1/1:17,5:21:32.88:293,33,0	1/1:7,1:7:12.40:51,12,0	0/1:9,0:10:4.06:32,0,4	0/1:20,0:19:19.05:19,0,67	0/0:14,0:12:11.33:0,11,107	0/1:13,0:9:7.15:17,0,7	1/1:13,1:13:0.02:69,0,0	1/1:16,3:18:14.41:133,14,0	0/1:20,0:15:16.86:17,0,34	0/1:14,0:11:14.45:39,0,14	1/1:5,0:3:3.85:22,4,0	0/1:13,3:16:12.81:120,0,13	1/1:17,3:20:10.62:169,11,0	1/1:6,2:6:3.94:29,4,0	0/0:17,0:17:1.24:0,1,134	1/1:24,4:25:36.51:263,37,0	0/1:27,0:26:11.64:12,0,85	0/1:15,1:15:4.80:57,0,5
chr10	47870105	.	T	TG	1218.85	PASS	AB=0.956;AC=20;AF=0.357;AN=56;BaseQRankSum=5.242;DP=514;FS=35.973;HRun=0;HaplotypeScore=140.7361;InbreedingCoeff=-0.3869;MQ=33.66;MQ0=35;MQRankSum=-4.346;QD=3.67;ReadPosRankSum=3.970;VQSLOD=1.4286;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:17:2.18:98,0,2	0/0:5,0:5:15.04:0,15,190	0/0:32,0:4:11.94:0,12,113	0/0:40,0:5:12.41:0,12,111	0/1:32,0:31:94.08:151,0,94	0/0:13,0:10:25.76:0,26,288	0/0:8,0:7:8.98:0,9,88	0/0:29,0:23:50.02:0,50,335	1/1:10,0:9:13.52:67,14,0	0/1:20,0:14:29.64:40,0,30	0/1:23,0:21:16.19:192,0,16	0/1:8,0:7:20.69:25,0,21	0/1:11,0:10:27.64:28,0,41	0/1:18,2:19:73.99:74,0,257	0/0:14,0:12:32.97:0,33,367	0/0:13,0:9:0.38:0,0,65	0/1:15,1:14:74.55:77,0,75	0/1:20,0:18:27.98:63,0,28	0/1:18,2:15:54.93:55,0,68	0/1:11,4:12:27.04:27,0,82	0/1:4,1:3:16.77:29,0,17	0/1:16,0:16:85.33:85,0,86	0/1:20,1:20:82.68:134,0,83	0/1:6,1:5:10.65:15,0,11	0/1:17,0:17:57.21:57,0,342	0/1:28,0:25:99:124,0,102	0/0:27,1:26:13.94:0,14,419	0/1:20,0:17:40.62:41,0,107
chr10	47870108	.	T	TG	319.62	PASS	AB=0.960;AC=13;AF=0.232;AN=56;BaseQRankSum=4.336;DP=519;FS=16.864;HRun=0;HaplotypeScore=142.0067;InbreedingCoeff=-0.1377;MQ=31.10;MQ0=39;MQRankSum=-4.069;QD=1.29;ReadPosRankSum=2.863;VQSLOD=1.8338;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:17:9.37:9,0,42	0/0:5,0:5:15.04:0,15,191	0/0:30,0:3:8.91:0,9,84	0/0:39,0:4:2.24:0,2,62	0/1:33,0:32:30.58:31,0,157	0/0:13,0:10:25.78:0,26,297	0/0:8,0:7:8.98:0,9,89	0/1:19,10:23:3.63:226,0,4	1/1:11,0:9:5.12:32,5,0	0/1:21,0:15:10.71:11,0,53	0/1:22,0:20:38.16:48,0,38	0/0:8,0:7:5.96:0,6,34	0/0:10,0:9:3.98:0,4,68	0/0:20,0:19:49.73:0,50,387	0/0:14,0:12:32.94:0,33,369	0/1:11,2:9:31.93:32,0,49	0/0:16,0:14:13.97:0,14,136	0/1:21,0:19:29.52:30,0,52	0/0:21,0:16:34.61:0,35,226	0/0:17,0:14:22.09:0,22,152	0/0:5,0:3:1.85:0,2,12	0/1:16,0:16:6.52:7,0,116	0/1:20,1:20:27.16:27,0,115	0/1:9,0:6:4.12:4,0,12	0/0:15,1:16:4.35:0,4,363	0/1:28,0:25:4.85:5,0,170	0/0:28,0:26:58.34:0,58,486	0/0:21,0:18:1.15:0,1,147
chr10	47870113	.	T	TG	80.62	PASS	AB=0.901;AC=4;AF=0.071;AN=56;BaseQRankSum=2.063;DP=519;FS=1.891;HRun=0;HaplotypeScore=144.3434;InbreedingCoeff=-0.0854;MQ=29.88;MQ0=43;MQRankSum=-3.090;QD=0.93;ReadPosRankSum=3.276;VQSLOD=2.7236;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:16:1.75:2,0,42	0/0:6,0:6:15.01:0,15,183	0/0:27,0:2:5.90:0,6,42	0/0:37,0:4:8.95:0,9,84	0/0:34,0:33:15.64:0,16,239	0/0:12,0:9:23.19:0,23,272	0/0:8,0:7:8.94:0,9,82	0/1:18,10:22:25.15:143,0,25	0/0:11,0:9:8.63:0,9,77	0/0:21,0:15:12.87:0,13,117	0/1:23,0:21:3.10:3,0,97	0/0:10,0:9:13.11:0,13,56	0/0:9,0:8:15.67:0,16,87	0/0:20,0:18:35.92:0,36,253	0/0:13,0:11:29.95:0,30,336	0/1:11,2:9:24.17:24,0,89	0/0:19,0:17:27.50:0,27,188	0/0:21,0:19:10.90:0,11,122	0/0:22,0:17:27.29:0,27,265	0/0:18,0:15:17.62:0,18,103	0/0:7,0:3:1.27:0,1,14	0/0:17,0:17:14.05:0,14,178	0/0:19,0:18:12.06:0,12,151	0/0:10,0:7:4.29:0,4,43	0/0:17,0:17:46.11:0,46,469	0/0:27,0:24:20.07:0,20,229	0/0:27,0:25:35.26:0,35,313	0/0:20,0:17:29.30:0,29,244
chr10	47870116	.	TTG	T	961.08	PASS	AB=0.983;AC=22;AF=0.393;AN=56;BaseQRankSum=4.588;DP=513;FS=0.460;HRun=0;HaplotypeScore=140.1432;InbreedingCoeff=-0.4690;MQ=29.64;MQ0=41;MQRankSum=-2.860;QD=2.30;ReadPosRankSum=-4.102;VQSLOD=1.3440;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:16:50.59:85,0,51	0/0:6,0:6:17.92:0,18,213	0/1:26,0:2:1.13:1,0,21	0/0:34,0:3:8.98:0,9,94	0/1:34,2:35:98.85:99,0,131	0/0:12,0:9:16.16:0,16,207	0/0:9,0:8:7.94:0,8,70	1/1:27,0:22:18.31:252,18,0	0/1:12,0:10:17.91:18,0,34	0/1:21,0:15:3.46:3,0,84	0/1:22,1:21:42.86:43,0,70	0/1:11,0:10:45.63:52,0,46	0/1:9,0:8:25.21:25,0,29	0/1:19,1:18:99:107,0,111	0/0:11,0:9:22.44:0,22,188	0/1:12,0:8:8.47:24,0,8	0/1:19,0:17:29.54:30,0,90	0/1:19,1:18:41.71:42,0,59	0/1:21,0:17:29:82,0,29	0/1:17,1:15:19.16:19,0,20	0/0:7,0:3:4.43:0,4,20	0/1:19,0:19:20.55:21,0,170	0/1:18,1:18:60.04:60,0,147	0/1:10,0:7:0.05:0,0,27	0/0:17,0:17:1.29:0,1,337	0/1:25,0:22:59.20:59,0,139	0/1:26,0:24:50.57:51,0,118	0/1:19,1:17:42.10:42,0,87
chr10	47870119	.	TTTG	T	784.65	PASS	AB=0.995;AC=17;AF=0.304;AN=56;BaseQRankSum=4.160;DP=509;FS=2.222;HRun=0;HaplotypeScore=145.4235;InbreedingCoeff=-0.3261;MQ=29.39;MQ0=43;MQRankSum=-2.606;QD=2.49;ReadPosRankSum=-4.772;VQSLOD=1.0066;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:18:61.69:62,0,193	0/0:6,0:6:18.06:0,18,347	0/0:25,0:2:2.93:0,3,65	0/0:30,0:3:9.03:0,9,143	0/0:36,0:35:1.57:0,2,412	0/0:12,0:9:25.40:0,25,344	0/0:8,0:7:8.92:0,9,128	1/1:16,8:18:29.21:373,29,0	0/0:10,0:8:7.99:0,8,63	0/0:19,0:15:22.05:0,22,322	0/1:22,0:20:48.92:49,0,202	0/1:11,1:11:36.11:36,0,118	0/1:10,0:9:29.32:29,0,85	0/1:21,0:18:74.16:74,0,96	0/0:13,0:11:29.06:0,29,428	0/1:13,0:9:36.67:41,0,37	0/1:18,0:16:14.60:15,0,210	0/1:20,0:18:22.27:22,0,143	0/1:20,0:16:63.21:63,0,144	0/1:20,0:16:10.90:11,0,116	0/0:7,0:3:4.83:0,5,40	0/1:19,0:19:46.54:47,0,322	0/1:20,0:19:21.44:21,0,289	0/0:10,0:7:7.11:0,7,31	0/0:17,0:17:4.19:0,4,428	0/1:25,0:22:49.19:49,0,369	0/1:26,0:24:45.01:45,0,139	0/1:20,0:17:3.03:3,0,286
chr10	47870120	.	TTG	T	704.19	PASS	AB=0.985;AC=19;AF=0.339;AN=56;BaseQRankSum=5.888;DP=515;FS=2.833;HRun=0;HaplotypeScore=140.4849;InbreedingCoeff=-0.3676;MQ=29.34;MQ0=44;MQRankSum=-3.676;QD=1.92;ReadPosRankSum=-3.486;VQSLOD=1.8601;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:24,1:18:66.21:66,0,182	0/0:6,0:6:18.06:0,18,318	0/0:25,0:2:2.79:0,3,54	0/0:31,0:3:9.03:0,9,143	0/1:37,0:36:33.53:34,0,387	0/0:12,0:9:9.41:0,9,290	0/0:7,0:7:8.87:0,9,139	1/1:24,0:18:28.20:153,28,0	0/1:10,0:8:10.23:10,0,99	0/0:19,0:15:23.39:0,23,389	0/1:22,0:20:21.95:22,0,307	0/1:13,0:12:41.23:41,0,127	0/1:10,0:9:34.10:34,0,54	0/1:21,0:18:38.29:93,0,38	0/0:13,0:11:24.16:0,24,339	0/1:12,1:9:4.88:88,0,5	0/1:17,1:16:16.96:17,0,263	0/1:20,1:19:43.68:44,0,248	0/1:20,1:16:71.09:71,0,134	0/1:20,0:16:2.65:3,0,122	0/0:7,0:3:5.05:0,5,50	0/1:21,0:21:22.03:22,0,394	0/1:20,0:19:31.14:31,0,335	0/0:10,0:7:8.82:0,9,65	0/0:17,0:17:3.46:0,3,443	0/1:25,0:22:55.21:55,0,431	0/1:26,0:24:60:60,0,124	0/1:20,0:17:17.77:18,0,197
chr10	47870124	.	TTG	T	738.46	PASS	AB=0.990;AC=19;AF=0.339;AN=56;BaseQRankSum=3.728;DP=514;FS=0.473;HRun=0;HaplotypeScore=139.8949;InbreedingCoeff=-0.3628;MQ=29.12;MQ0=46;MQRankSum=-3.539;QD=1.95;ReadPosRankSum=-4.117;VQSLOD=0.5349;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:18:53.25:73,0,53	0/0:7,0:7:16.31:0,16,118	0/0:19,0:1:3:0,3,25	0/0:30,0:3:8.68:0,9,50	0/1:37,0:36:42.16:42,0,99	0/0:12,0:8:5.27:0,5,133	0/0:7,0:6:7.86:0,8,51	1/1:23,0:17:28.20:126,28,0	0/0:11,0:9:1.71:0,2,59	0/0:20,0:16:16.83:0,17,155	0/1:22,1:20:28.68:29,0,112	0/1:12,0:11:33.56:34,0,79	0/1:11,0:10:31.77:41,0,32	0/1:22,0:19:17.94:103,0,18	0/0:13,0:11:11.34:0,11,152	0/1:13,0:9:19.93:41,0,20	0/1:18,0:16:18.02:18,0,105	0/1:21,0:19:18.97:19,0,102	0/1:21,0:17:1.56:156,0,2	0/1:22,1:18:23.61:36,0,24	0/0:7,0:3:4.15:0,4,19	0/1:19,2:21:21.14:21,0,183	0/1:19,0:19:40.98:41,0,167	0/0:10,0:7:8.87:0,9,63	0/1:17,0:17:1.24:1,0,142	0/1:23,0:21:32.99:33,0,138	0/1:27,0:24:28.56:65,0,29	0/1:21,0:17:13.58:14,0,97
chr10	47872157	.	CG	C	848.26	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=1.416;DP=713;FS=0.734;HRun=4;HaplotypeScore=85.1622;InbreedingCoeff=0.9964;MQ=87.36;MQ0=0;MQRankSum=-1.154;QD=26.51;ReadPosRankSum=-0.640;VQSLOD=2.2757;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,114,1585	0/0:7,0:7:21.05:0,21,276	0/0:22,0:22:60.20:0,60,817	0/0:29,0:29:62.96:0,63,749	0/0:13,0:13:39.12:0,39,524	0/0:28,0:28:81.13:0,81,1058	0/0:43,0:43:99:0,114,1555	1/1:1,16:17:48.15:574,48,0	0/0:23,0:23:66.19:0,66,871	0/0:27,0:27:72.24:0,72,997	0/0:13,0:13:36.11:0,36,476	0/0:42,0:42:99:0,120,1627	0/0:27,0:27:69.17:0,69,904	0/0:39,0:39:99:0,114,1525	0/0:37,0:36:99:0,99,1351	1/1:1,14:15:33.10:396,33,0	0/0:37,0:37:99:0,108,1512	0/0:30,0:30:84.27:0,84,1159	0/0:19,0:19:57.18:0,57,779	0/0:12,0:12:36.11:0,36,485	0/0:68,0:68:99:0,199,2732	0/0:15,0:15:36.11:0,36,486	0/0:9,0:9:27.08:0,27,361	0/0:32,0:32:90.22:0,90,1211	0/0:25,0:25:75.21:0,75,994	0/0:20,0:20:57.19:0,57,797	0/0:14,0:14:36.12:0,36,504	0/0:9,0:9:27.07:0,27,355
chr10	47872431	.	T	TC	4882.24	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-12.739;DP=640;FS=1.204;HRun=5;HaplotypeScore=61.6878;InbreedingCoeff=0.9955;MQ=76.92;MQ0=0;MQRankSum=-1.292;QD=32.55;ReadPosRankSum=3.168;VQSLOD=5.4580;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,135,1422	0/0:6,0:6:15.04:0,15,161	0/0:14,0:14:34.79:0,35,342	0/0:15,0:15:38.89:0,39,400	0/0:18,0:18:51.13:0,51,547	0/0:23,0:23:60.15:0,60,645	0/0:27,0:27:75.16:0,75,796	0/0:32,0:32:78.19:0,78,833	0/0:19,0:19:54.14:0,54,580	0/0:22,0:22:60.14:0,60,639	0/0:12,0:12:33.08:0,33,355	0/0:23,0:23:60.14:0,60,637	0/0:24,0:24:57.13:0,57,604	1/1:2,24:26:63.20:829,63,0	0/0:24,0:24:72.18:0,72,774	0/0:25,0:25:69.16:0,69,734	0/0:29,0:29:84.20:0,84,895	0/0:26,0:25:72.18:0,72,774	1/1:1,19:20:57.16:720,57,0	1/1:2,12:14:33.06:415,33,0	1/1:2,56:58:99:1934,147,0	0/0:12,0:12:33.08:0,33,355	0/0:10,0:10:24.06:0,24,258	0/0:24,0:24:63.16:0,63,677	0/0:17,0:17:51.10:0,51,538	0/0:24,0:24:69.17:0,69,735	1/1:3,29:32:75.24:985,75,0	0/0:16,0:16:30.07:0,30,322
chr10	47873984	.	TACACAC	T	944.85	PASS	AB=0.954;AC=29;AF=0.659;AN=44;BaseQRankSum=4.614;DP=669;FS=8.059;HRun=0;HaplotypeScore=137.8898;InbreedingCoeff=0.2979;MQ=49.04;MQ0=21;MQRankSum=-2.650;QD=2.89;ReadPosRankSum=2.588;VQSLOD=1.8941;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:41,1:43:2.60:41,3,0	0/1:6,0:6:27.77:28,0,150	./.	0/0:60,0:23:0.47:0,0,1	1/1:10,0:11:3.01:44,3,0	0/0:17,0:17:12.04:0,12,206	0/0:22,1:24:12.04:0,12,278	./.	1/1:11,3:14:6.02:100,6,0	0/1:16,2:18:32.21:109,0,32	1/1:6,1:7:0.47:2,0,0	1/1:18,5:22:6.40:78,6,0	1/1:13,5:18:6.02:120,6,0	1/1:25,0:32:6.02:84,6,0	0/0:25,0:25:35.90:0,36,603	1/1:19,0:21:4.43:47,4,0	1/1:18,5:22:3:60,3,0	0/1:25,1:25:4.23:54,0,4	1/1:18,0:18:3.01:42,3,0	./.	./.	./.	0/0:13,0:13:0:0,0,0	1/1:27,4:33:3.64:29,4,0	1/1:11,1:13:6.02:102,6,0	0/0:28,0:28:2.82:0,3,6	1/1:13,0:19:10.07:138,10,0	./.
chr10	47874536	.	GGA	G	4254.50	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=10.840;DP=634;FS=0.415;HRun=0;HaplotypeScore=71.0563;InbreedingCoeff=0.9996;MQ=71.19;MQ0=2;MQRankSum=-1.186;QD=39.76;ReadPosRankSum=1.265;VQSLOD=6.8163;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,114,2307	0/0:12,0:12:36.12:0,36,732	0/0:27,0:27:78.25:0,78,1513	0/0:17,0:16:40.52:0,41,705	0/0:24,0:24:72.25:0,72,1418	0/0:23,0:23:66.23:0,66,1340	0/0:23,0:23:69.22:0,69,1363	0/0:39,0:39:99:0,117,2359	0/0:12,0:12:33.10:0,33,635	0/0:19,0:19:57.20:0,57,1147	0/0:15,0:15:42.14:0,42,851	0/0:16,0:16:48.16:0,48,973	0/0:25,0:25:75.25:0,75,1451	1/1:0,20:20:51.17:832,51,0	0/0:38,0:38:99:0,114,2315	0/0:22,0:22:66.23:0,66,1340	0/0:26,0:26:72.25:0,72,1457	0/0:23,0:23:69.24:0,69,1356	1/1:0,25:25:69.16:1025,69,0	1/1:0,20:19:51.17:832,51,0	1/1:0,23:22:57.19:930,57,0	0/0:24,0:24:72.25:0,72,1454	0/0:24,0:24:72.24:0,72,1424	0/0:23,0:23:66.23:0,66,1309	0/0:20,0:20:60.18:0,60,1180	0/0:28,0:28:81.27:0,81,1610	1/1:0,19:19:39.13:636,39,0	0/0:9,0:9:27.09:0,27,545
chr10	47877002	.	CATG	C	1299.79	PASS	AB=0.990;AC=21;AF=0.375;AN=56;BaseQRankSum=7.207;DP=560;FS=18.705;HRun=0;HaplotypeScore=177.7232;InbreedingCoeff=-0.0009;MQ=30.49;MQ0=18;MQRankSum=-3.532;QD=4.66;ReadPosRankSum=1.438;VQSLOD=1.2025;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:14,2:16:7.97:56,8,0	0/1:12,0:12:6.67:7,0,212	0/0:31,0:3:5.97:0,6,46	0/0:33,0:7:7.17:0,7,73	0/1:24,0:24:0:0,0,0	0/0:11,0:11:7.35:0,7,105	0/1:12,0:11:7.91:8,0,210	0/0:13,0:13:36.08:0,36,761	0/0:11,0:11:4.02:0,4,61	0/1:28,1:30:99:462,0,539	1/1:19,1:20:1.08:4,1,0	0/0:27,1:28:2.20:0,2,107	0/1:18,0:18:66.81:67,0,136	0/1:20,0:20:4.98:5,0,69	0/0:21,0:20:9.18:0,9,157	0/1:17,0:17:52.20:52,0,120	0/1:7,0:6:40.14:40,0,65	0/0:11,0:11:21.52:0,22,481	0/1:12,0:10:99:102,0,341	1/1:22,1:24:3.05:11,3,0	0/0:39,0:31:16.19:0,16,223	0/0:25,1:23:2.73:0,3,82	0/0:24,0:23:5.41:0,5,32	0/0:32,0:32:8.58:0,9,211	1/1:26,0:26:0.94:20,1,0	0/1:19,0:19:99:372,0,227	1/1:10,0:12:16.84:188,17,0	0/1:9,0:9:49.22:60,0,49
chr10	47877003	.	ATG	A	415.78	PASS	AB=0.839;AC=19;AF=0.339;AN=56;BaseQRankSum=5.525;DP=566;FS=8.752;HRun=0;HaplotypeScore=179.2782;InbreedingCoeff=0.0491;MQ=30.50;MQ0=18;MQRankSum=-2.038;QD=1.47;ReadPosRankSum=2.203;VQSLOD=2.1137;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:15,1:16:4.24:28,4,0	0/1:8,4:12:0.20:0,0,172	0/0:32,0:3:4.53:0,5,15	0/0:34,0:7:8.91:0,9,84	0/1:17,7:24:0.07:0,0,0	0/0:9,1:11:10.78:0,11,112	0/1:9,3:11:12.10:12,0,169	0/0:14,0:14:27.78:0,28,391	0/0:11,0:11:3.51:0,4,27	0/1:22,8:30:99:166,0,467	0/1:16,3:20:0.09:0,0,0	0/0:25,4:29:7.81:0,8,136	0/1:16,2:18:56.11:56,0,104	0/0:20,1:20:4.22:0,4,69	0/0:17,3:20:6.11:0,6,123	0/0:16,1:17:2.26:0,2,100	0/1:6,1:6:11.50:12,0,53	0/0:9,2:11:8.02:0,8,369	0/1:9,3:10:33.07:33,0,259	1/1:17,7:24:4.73:23,5,0	0/1:40,1:32:7.10:7,0,160	0/0:21,5:23:3.01:0,3,65	0/0:19,5:23:5.18:0,5,17	0/0:25,4:32:9.06:0,9,183	1/1:23,3:26:4.50:19,5,0	0/1:16,4:20:99:101,0,244	1/1:11,1:12:6.95:70,7,0	0/1:8,1:9:6.97:35,0,7
chr10	47877013	.	A	ACTG	108.98	PASS	AB=0.984;AC=19;AF=0.339;AN=56;BaseQRankSum=6.646;DP=665;FS=25.389;HRun=0;HaplotypeScore=244.8241;InbreedingCoeff=-0.0118;MQ=30.96;MQ0=24;MQRankSum=-1.884;QD=0.31;ReadPosRankSum=-1.555;VQSLOD=0.8018;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:17,0:17:9.80:42,0,10	0/0:15,0:15:16.27:0,16,205	0/0:32,0:3:9.03:0,9,158	0/0:34,0:7:21.07:0,21,360	0/1:28,0:28:0:0,0,0	0/1:12,0:11:23.94:24,0,107	0/0:16,0:15:17.48:0,17,277	0/0:18,0:17:30.54:0,31,529	0/0:13,0:12:2.35:0,2,14	0/0:39,0:39:46.95:0,47,699	1/1:21,1:22:1.08:4,1,0	0/0:33,0:33:6.90:0,7,216	0/1:23,0:22:1.74:2,0,214	0/1:24,0:22:24.96:25,0,91	0/1:23,0:21:12.13:12,0,146	0/1:23,0:24:4.13:4,0,226	0/1:9,1:9:36.60:37,0,131	0/0:12,0:12:29.35:0,29,460	0/1:18,0:17:43.41:43,0,402	0/1:30,0:29:4.76:5,0,5	0/0:44,0:34:13.29:0,13,203	0/1:33,1:31:4.76:5,0,47	1/1:26,2:27:3.13:13,3,0	0/0:33,0:34:9.95:0,10,202	1/1:32,1:32:6.85:27,7,0	0/0:26,0:25:12.25:0,12,405	0/1:13,0:13:5.48:5,0,37	0/1:9,0:9:3.61:4,0,49
chr10	47877019	.	T	TCA	1958.19	PASS	AB=0.973;AC=39;AF=0.696;AN=56;BaseQRankSum=2.052;DP=674;FS=78.906;HRun=0;HaplotypeScore=227.1722;InbreedingCoeff=0.1930;MQ=31.34;MQ0=27;MQRankSum=-1.981;QD=3.41;ReadPosRankSum=1.054;VQSLOD=-0.0705;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:11,7:18:0.79:2,1,0	0/1:15,0:15:25.20:25,0,46	0/0:31,0:3:5.33:0,5,27	0/0:34,0:7:21.06:0,21,251	1/1:27,2:29:2.79:47,3,0	0/1:10,0:10:2.96:3,0,14	0/0:19,0:18:14.51:0,15,181	1/1:16,0:14:19.27:104,19,0	0/0:14,0:13:1.62:0,2,6	1/1:39,1:41:63.33:500,63,0	0/1:22,1:22:0.03:0,0,0	1/1:32,0:32:7.33:57,7,0	0/1:21,0:20:3.33:60,0,3	1/1:21,0:22:6.95:51,7,0	0/1:24,0:23:3.12:3,0,122	0/1:19,0:19:23.91:24,0,41	0/1:14,0:12:5.37:77,0,5	1/1:9,3:12:7.97:271,8,0	1/1:16,0:16:23.65:256,24,0	1/1:29,0:29:3.91:27,4,0	1/1:42,5:38:2.14:73,2,0	0/1:33,0:31:8.51:71,0,9	1/1:26,0:26:4.62:17,5,0	0/1:29,2:32:10.93:33,0,11	1/1:23,9:32:5.29:18,5,0	1/1:19,7:27:28.48:296,28,0	1/1:14,0:15:8.51:42,9,0	1/1:3,8:11:5.50:56,6,0
chr10	47877030	.	C	CT	859.19	PASS	AB=0.914;AC=19;AF=0.339;AN=56;BaseQRankSum=11.442;DP=720;FS=68.000;HRun=0;HaplotypeScore=246.6982;InbreedingCoeff=-0.0948;MQ=32.67;MQ0=27;MQRankSum=-4.577;QD=1.98;ReadPosRankSum=-0.513;VQSLOD=0.5999;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:16,1:20:7.75:72,8,0	0/1:10,5:15:61.80:103,0,62	0/0:27,0:3:6.02:0,6,79	0/0:34,0:7:21.07:0,21,284	0/0:27,3:32:5.70:0,6,64	0/0:10,0:10:4.58:0,5,36	0/1:20,0:20:0.96:1,0,188	0/0:17,0:14:34.80:0,35,403	0/1:12,0:14:6.39:6,0,35	0/1:32,6:42:99:256,0,295	0/1:19,2:23:0.46:0,0,39	0/0:33,1:35:2.46:0,2,221	0/1:16,3:21:57.41:57,0,169	0/1:7,1:24:1.16:79,0,1	0/0:22,1:23:4.34:0,4,202	0/1:22,0:22:88.04:88,0,285	0/0:18,0:16:17.58:0,18,303	0/0:12,1:14:29.57:0,30,372	0/0:20,0:22:19.94:0,20,425	0/1:18,7:30:4:15,0,4	0/0:43,0:41:8.96:0,9,117	0/1:25,7:34:68.83:69,0,116	1/1:14,8:26:5.64:35,6,0	0/1:32,1:36:4.68:5,0,237	0/1:22,8:31:2.72:3,0,8	0/1:23,4:30:99:201,0,287	0/1:4,0:18:4.98:11,0,5	0/1:14,0:14:5.69:6,0,130
chr10	47877033	.	A	AC	1600.57	PASS	AB=0.980;AC=24;AF=0.429;AN=56;BaseQRankSum=13.234;DP=725;FS=93.161;HRun=1;HaplotypeScore=240.7854;InbreedingCoeff=-0.3348;MQ=32.70;MQ0=28;MQRankSum=-6.542;QD=2.98;ReadPosRankSum=-1.288;VQSLOD=-0.2850;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:20,0:20:7.98:56,0,8	0/1:15,0:15:19.55:135,0,20	0/0:27,0:3:3.01:0,3,34	0/0:34,0:7:18.06:0,18,229	0/0:30,2:32:4.85:0,5,75	0/1:14,0:11:19.54:43,0,20	0/1:21,1:21:12.73:13,0,172	0/0:17,0:13:30.07:0,30,350	0/1:15,0:14:25.79:39,0,26	0/1:42,3:44:99:422,0,370	0/1:24,0:23:27.15:28,0,27	0/1:31,3:34:19.95:20,0,183	0/1:21,1:21:93.49:93,0,145	0/1:28,0:25:5.77:45,0,6	0/1:24,0:22:40.82:41,0,168	0/1:21,1:22:65.91:66,0,248	0/0:17,0:15:7.92:0,8,262	0/0:15,0:15:33.09:0,33,436	0/1:26,0:24:9.80:10,0,366	1/1:28,2:29:3.37:51,3,0	0/0:45,0:39:10.50:0,11,126	0/1:35,2:34:99:116,0,125	1/1:26,1:27:11.99:94,12,0	0/1:34,1:35:11.86:12,0,181	1/1:35,0:33:7.52:91,8,0	0/1:32,0:31:99:340,0,295	0/1:17,0:17:3.67:31,0,4	0/1:14,0:14:17.65:18,0,135
chr10	47877034	.	CA	C	1496.90	PASS	AB=0.901;AC=22;AF=0.393;AN=56;BaseQRankSum=13.026;DP=733;FS=93.408;HRun=1;HaplotypeScore=239.3568;InbreedingCoeff=-0.3683;MQ=32.82;MQ0=29;MQRankSum=-6.783;QD=2.88;ReadPosRankSum=-0.720;VQSLOD=-0.2718;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:20,1:21:50.97:53,0,51	0/1:12,3:15:20.48:135,0,20	0/0:27,0:3:3.01:0,3,34	0/0:34,0:6:18.06:0,18,229	0/0:23,9:32:4.77:0,5,94	0/1:14,1:12:20.97:36,0,21	0/1:20,3:22:9.72:10,0,216	0/0:17,0:13:29.35:0,29,339	0/1:13,2:14:29.62:38,0,30	0/1:34,11:44:99:398,0,486	0/1:16,8:23:28.32:28,0,36	0/1:32,2:34:21.03:21,0,175	0/1:22,0:21:90.98:91,0,136	0/1:29,0:26:33.95:34,0,53	0/1:21,4:23:40.82:41,0,195	0/1:20,2:22:60.41:60,0,251	0/0:17,0:15:7.48:0,7,293	0/0:15,0:15:32.33:0,32,514	0/0:24,2:24:7.52:0,8,394	0/1:27,3:29:2.80:47,0,3	0/0:45,0:39:19.12:0,19,157	0/1:26,12:35:99:110,0,187	1/1:24,3:27:11.44:92,11,0	0/1:36,0:36:9.85:10,0,187	1/1:32,3:33:5.86:87,6,0	0/1:27,6:32:99:324,0,318	0/1:17,0:17:10.17:28,0,10	0/1:13,1:14:16.37:16,0,162
chr10	47877035	.	A	AC	1125.97	PASS	AB=0.984;AC=22;AF=0.393;AN=56;BaseQRankSum=13.514;DP=737;FS=94.370;HRun=1;HaplotypeScore=248.0466;InbreedingCoeff=-0.2970;MQ=32.87;MQ0=29;MQRankSum=-7.244;QD=2.16;ReadPosRankSum=-1.267;VQSLOD=-0.3572;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:21,0:21:40.46:43,0,40	0/1:14,1:15:18.79:141,0,19	0/0:28,0:4:3.48:0,3,39	0/0:34,0:6:18.06:0,18,229	0/1:31,1:32:0.83:1,0,69	0/1:15,0:12:5.91:6,0,23	0/0:24,0:23:12.37:0,12,205	0/0:15,0:11:27.02:0,27,321	0/1:15,0:14:6.58:7,0,30	0/1:44,1:44:99:354,0,411	0/1:25,1:25:11.28:11,0,32	0/1:33,1:34:6.84:7,0,185	0/1:22,0:21:61.15:61,0,159	0/1:29,0:26:36.50:37,0,78	0/1:25,0:23:13.72:14,0,170	0/1:22,0:22:73.81:74,0,252	0/0:17,0:15:24.12:0,24,287	0/0:15,0:15:37.68:0,38,470	0/1:26,0:24:1.23:1,0,409	0/1:30,0:29:15.26:53,0,15	0/0:46,0:40:11.51:0,12,190	0/1:36,2:35:69.43:69,0,173	1/1:23,4:27:9.70:48,10,0	0/0:36,1:37:5.84:0,6,213	1/1:30,4:33:7.58:43,8,0	0/1:31,2:32:99:290,0,309	0/1:17,0:17:20.44:22,0,20	0/1:14,0:14:0.88:1,0,137
chr10	47877036	.	CA	C	1071.82	PASS	AB=0.935;AC=20;AF=0.357;AN=56;BaseQRankSum=13.178;DP=737;FS=98.110;HRun=1;HaplotypeScore=243.9660;InbreedingCoeff=-0.2601;MQ=32.89;MQ0=29;MQRankSum=-6.908;QD=2.22;ReadPosRankSum=-0.804;VQSLOD=-0.5355;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:20,1:21:42.45:42,0,68	0/1:11,4:15:19.77:140,0,20	0/0:27,0:4:3.90:0,4,40	0/0:33,0:7:21.07:0,21,265	0/1:30,2:32:0.77:1,0,87	0/1:15,0:12:5.85:6,0,23	0/0:24,0:23:15.46:0,15,287	0/0:14,0:10:26.30:0,26,311	0/1:15,0:14:5.88:6,0,31	0/1:39,6:44:99:335,0,511	0/1:25,1:25:11.25:11,0,41	0/1:35,0:35:7.90:8,0,179	0/1:21,3:23:54.73:55,0,142	0/1:28,0:25:37.04:37,0,72	0/1:24,1:23:13.59:14,0,198	0/1:22,0:22:67.69:68,0,269	0/0:17,0:15:24.01:0,24,318	0/0:14,1:15:36.86:0,37,537	0/0:26,0:24:1.77:0,2,411	0/1:23,7:29:4.36:52,0,4	0/0:46,0:40:22.13:0,22,206	0/1:33,5:35:65.86:66,0,212	1/1:23,3:26:7.34:42,7,0	0/0:38,0:38:4.78:0,5,198	1/1:31,3:33:5.78:40,6,0	0/1:29,4:32:99:283,0,367	0/1:17,0:17:9.99:21,0,10	0/0:14,0:14:0.51:0,1,162
chr10	47877037	.	A	AC	1317.22	PASS	AB=0.959;AC=22;AF=0.393;AN=56;BaseQRankSum=13.320;DP=738;FS=105.657;HRun=1;HaplotypeScore=247.8856;InbreedingCoeff=-0.3234;MQ=33.21;MQ0=28;MQRankSum=-6.487;QD=2.51;ReadPosRankSum=-1.764;VQSLOD=-0.4152;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:21,1:22:19.21:19,0,61	0/1:14,0:14:19.29:92,0,19	0/0:26,0:4:3.90:0,4,40	0/0:32,0:7:21.02:0,21,246	0/1:31,0:32:5.10:5,0,69	0/1:13,2:12:15.15:38,0,15	0/0:24,0:23:10.96:0,11,253	0/0:14,0:10:26.88:0,27,323	0/1:14,1:14:0.14:0,0,32	0/1:42,3:44:99:350,0,422	0/1:26,0:25:13.41:13,0,30	0/1:35,0:35:8.42:8,0,186	0/1:22,2:23:74.46:74,0,163	0/1:27,1:25:99:104,0,102	0/1:23,2:23:14.20:14,0,170	0/1:22,0:22:69.21:69,0,255	0/0:17,0:15:24.59:0,25,289	0/0:16,0:16:21.84:0,22,453	0/1:25,0:23:65.48:65,0,415	0/1:29,2:30:13.16:69,0,13	0/0:45,1:40:13.50:0,13,225	0/1:37,1:35:47.30:47,0,189	1/1:24,1:26:9.57:46,10,0	0/0:38,1:39:12.45:0,12,233	1/1:35,0:33:14.11:90,14,0	0/1:29,4:32:99:316,0,346	0/1:18,1:19:18.75:47,0,19	0/1:14,0:14:12.04:12,0,137
chr10	47877038	.	CA	C	1211.70	PASS	AB=0.977;AC=21;AF=0.375;AN=56;BaseQRankSum=13.417;DP=740;FS=109.476;HRun=1;HaplotypeScore=245.2881;InbreedingCoeff=-0.2717;MQ=33.38;MQ0=28;MQRankSum=-8.033;QD=2.38;ReadPosRankSum=-1.056;VQSLOD=-0.5194;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:21,1:22:16.16:16,0,99	0/1:14,0:14:19.83:91,0,20	0/0:26,0:5:7.44:0,7,57	0/0:31,0:7:21.02:0,21,247	0/1:32,1:33:5.08:5,0,87	0/1:15,0:12:15.15:38,0,15	0/0:24,1:24:17:0,17,344	0/0:13,1:10:26.16:0,26,312	0/0:13,2:14:0.79:0,1,33	0/1:44,1:44:99:334,0,511	0/1:26,0:25:13.28:13,0,39	0/1:35,0:35:6.51:7,0,196	0/1:24,0:23:67.52:68,0,177	0/1:28,1:26:70.55:102,0,71	0/1:26,0:24:11.16:11,0,220	0/1:22,0:22:69.26:69,0,269	0/0:18,0:16:27.48:0,27,343	0/0:16,0:16:23.92:0,24,553	0/1:22,3:23:65.47:65,0,416	0/1:30,1:30:2.68:68,0,3	0/0:44,2:40:18.35:0,18,203	0/1:35,3:35:44.28:44,0,216	1/1:24,2:26:6.78:39,7,0	0/0:38,1:39:14.68:0,15,241	1/1:32,1:31:10.06:76,10,0	0/1:33,0:32:99:270,0,376	0/1:18,1:19:8.81:46,0,9	0/1:14,0:14:8.85:9,0,162
chr10	47877039	.	A	ACTG	841.27	PASS	AB=0.993;AC=21;AF=0.375;AN=56;BaseQRankSum=11.070;DP=741;FS=64.126;HRun=0;HaplotypeScore=264.0671;InbreedingCoeff=-0.3291;MQ=33.54;MQ0=27;MQRankSum=-6.151;QD=1.64;ReadPosRankSum=-2.148;VQSLOD=-0.1730;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:22:61.71:62,0,123	0/1:14,0:14:43.56:47,0,44	0/0:26,0:6:6.60:0,7,60	0/0:29,0:7:15.01:0,15,220	0/0:32,1:33:5.62:0,6,105	0/1:15,0:12:13.46:18,0,13	0/0:26,0:25:27.69:0,28,440	0/1:14,0:10:1.03:1,0,417	0/0:14,0:13:1.87:0,2,55	0/1:43,2:44:99:186,0,738	0/0:26,0:25:1.61:0,2,53	0/1:35,0:35:16.13:16,0,284	0/1:24,0:23:65.28:65,0,301	0/1:30,0:27:99:128,0,161	0/1:26,0:24:14.30:14,0,293	0/1:22,1:23:45.78:46,0,376	0/0:18,0:16:28.05:0,28,425	0/0:16,0:16:47.83:0,48,712	0/1:26,0:24:16.72:17,0,618	0/1:30,1:30:38.62:58,0,39	0/1:46,0:40:2.11:2,0,312	0/1:38,0:36:14.14:14,0,272	1/1:25,0:26:6.38:22,6,0	0/0:39,0:39:12.54:0,13,386	1/1:33,0:32:9.05:115,9,0	0/1:33,0:32:85.32:85,0,574	0/1:18,0:18:31.80:94,0,32	0/1:14,0:14:6.70:7,0,205
chr10	47877040	.	CA	C	1054.09	PASS	AB=0.976;AC=22;AF=0.393;AN=56;BaseQRankSum=13.282;DP=742;FS=114.088;HRun=1;HaplotypeScore=246.1632;InbreedingCoeff=-0.3224;MQ=33.77;MQ0=27;MQRankSum=-6.771;QD=1.99;ReadPosRankSum=-2.244;VQSLOD=-0.4167;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:21,1:22:26.29:26,0,102	0/1:14,0:14:17.67:106,0,18	0/0:23,0:4:11.24:0,11,107	0/0:26,0:7:15.01:0,15,171	0/1:33,0:33:2.40:2,0,87	0/1:15,0:12:12.01:29,0,12	0/0:26,1:26:24.21:0,24,421	0/0:16,0:12:32.27:0,32,366	0/1:14,0:13:13.35:13,0,38	0/1:44,2:45:99:244,0,532	0/1:24,1:25:10.70:11,0,38	0/1:35,0:35:8.86:9,0,246	0/1:24,0:23:46.52:47,0,231	0/1:27,3:27:48.20:48,0,71	0/1:27,0:25:12.23:12,0,231	0/1:22,0:23:52.05:52,0,269	0/0:18,0:16:25.07:0,25,385	0/0:16,0:16:2.68:0,3,531	0/1:24,2:24:61.88:62,0,415	0/1:28,2:30:5.94:40,0,6	0/0:47,0:41:13.53:0,14,198	0/1:37,1:36:60.93:61,0,245	1/1:26,0:26:9.66:63,10,0	0/0:39,0:39:7.92:0,8,236	1/1:32,2:32:15.33:109,15,0	0/1:33,0:32:99:225,0,421	0/1:17,1:18:10.87:44,0,11	0/1:14,0:14:14.10:14,0,162
chr10	47877043	.	A	AC	1653.38	PASS	AB=0.988;AC=24;AF=0.429;AN=56;BaseQRankSum=13.489;DP=744;FS=123.028;HRun=1;HaplotypeScore=250.7077;InbreedingCoeff=-0.3225;MQ=34.51;MQ0=26;MQRankSum=-7.378;QD=2.95;ReadPosRankSum=-3.437;VQSLOD=0.2279;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:24:64.09:64,0,91	0/1:13,1:14:51.40:171,0,51	0/0:20,0:5:11.98:0,12,118	0/0:24,0:9:18.05:0,18,208	0/1:33,0:33:21.65:22,0,69	1/1:15,0:12:8.58:71,9,0	0/1:27,0:26:1.90:2,0,406	0/0:17,0:13:32.87:0,33,399	0/1:15,0:14:33.17:33,0,63	0/1:45,0:44:99:445,0,472	0/1:24,0:24:26.70:40,0,27	0/1:34,1:35:26.50:27,0,289	0/1:26,0:25:35.27:35,0,310	0/1:30,0:27:49.77:50,0,103	0/1:28,0:26:9.08:9,0,205	0/1:23,1:24:71.17:71,0,255	0/0:19,0:17:20.56:0,21,367	0/0:16,0:16:20.04:0,20,476	0/1:25,0:23:37.95:38,0,482	0/1:30,2:31:43.09:60,0,43	0/0:49,0:43:12.93:0,13,252	0/1:36,0:34:99:129,0,220	1/1:23,2:25:10.74:62,11,0	0/0:38,1:39:2.73:0,3,257	1/1:34,1:33:19.07:201,19,0	0/1:33,1:33:99:267,0,444	0/1:19,0:19:16.82:17,0,32	0/1:13,0:13:9.63:10,0,137
chr10	47877044	.	CA	C	1483.66	PASS	AB=0.934;AC=22;AF=0.393;AN=56;BaseQRankSum=13.512;DP=750;FS=125.175;HRun=1;HaplotypeScore=246.4505;InbreedingCoeff=-0.3851;MQ=34.73;MQ0=26;MQRankSum=-8.699;QD=2.78;ReadPosRankSum=-2.737;VQSLOD=0.0798;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:24:61.04:61,0,121	0/1:12,3:15:52.26:166,0,52	0/0:20,0:5:14.26:0,14,155	0/0:26,0:10:24.06:0,24,270	0/1:24,9:33:21.65:22,0,87	1/1:15,0:12:3.47:39,3,0	0/0:26,1:26:1.14:0,1,467	0/0:17,0:13:35.16:0,35,423	0/1:13,2:14:32.05:32,0,65	0/1:41,4:45:99:421,0,578	0/1:22,2:23:35.78:40,0,36	0/1:34,0:34:24.65:25,0,281	0/1:27,0:26:30.37:30,0,320	0/1:30,0:27:32.28:32,0,73	0/1:24,4:26:5.72:6,0,249	0/1:25,0:25:65.57:66,0,269	0/0:20,0:18:22.68:0,23,435	0/0:17,0:17:22.20:0,22,560	0/1:24,1:23:39.70:40,0,470	0/1:31,1:31:56.28:56,0,70	0/0:50,1:45:23.87:0,24,322	0/1:29,6:33:99:116,0,246	0/1:21,5:26:12.15:46,0,12	0/0:37,1:38:5.72:0,6,233	1/1:27,8:33:17.99:197,18,0	0/1:32,1:32:99:234,0,536	0/1:19,0:19:13.48:13,0,56	0/1:13,0:13:5.56:6,0,162
chr10	47877045	.	A	AC	1745.93	PASS	AB=0.993;AC=23;AF=0.411;AN=56;BaseQRankSum=13.657;DP=747;FS=129.466;HRun=1;HaplotypeScore=251.7220;InbreedingCoeff=-0.3989;MQ=34.92;MQ0=23;MQRankSum=-8.272;QD=3.05;ReadPosRankSum=-3.572;VQSLOD=0.1164;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:25:82.92:83,0,112	0/1:15,0:15:49.51:176,0,50	0/0:18,0:5:14.08:0,14,157	0/0:24,0:9:21.05:0,21,238	0/1:34,0:34:21.65:22,0,69	1/1:14,0:11:4.54:28,5,0	0/0:27,0:26:12.91:0,13,453	0/0:17,0:13:33.51:0,34,396	0/1:15,0:14:30.29:30,0,61	0/1:46,0:45:99:481,0,489	0/1:24,0:23:25.55:54,0,26	0/1:33,1:34:21.83:22,0,289	0/1:28,1:28:75.36:75,0,340	0/1:30,0:27:61.05:61,0,103	0/1:28,0:26:22.32:22,0,220	0/1:25,0:25:70.97:71,0,254	0/0:20,0:18:30.01:0,30,413	0/0:17,0:17:31.57:0,32,484	0/1:25,0:23:26.46:26,0,494	0/1:32,0:32:80.32:80,0,82	0/0:52,0:46:22.36:0,22,353	0/1:33,1:33:99:114,0,221	0/1:23,1:24:13.50:74,0,14	0/1:39,0:39:1.01:1,0,256	1/1:33,0:31:19.04:190,19,0	0/1:34,0:33:99:271,0,521	0/1:19,0:19:14.37:14,0,53	0/1:13,0:13:12.78:13,0,137
chr10	47877046	.	CA	C	1524.95	PASS	AB=0.920;AC=22;AF=0.393;AN=56;BaseQRankSum=13.560;DP=746;FS=130.343;HRun=1;HaplotypeScore=244.7143;InbreedingCoeff=-0.3969;MQ=35.19;MQ0=22;MQRankSum=-8.976;QD=2.87;ReadPosRankSum=-2.871;VQSLOD=-0.2022;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:23,2:25:79.89:80,0,169	0/1:11,3:14:69.20:146,0,69	0/0:17,0:5:14.53:0,15,160	0/0:21,0:8:21.06:0,21,255	0/1:28,5:33:21.65:22,0,87	1/1:14,0:11:2.98:24,3,0	0/0:26,1:26:12.96:0,13,491	0/0:17,0:13:32.79:0,33,387	0/1:15,0:14:20.50:21,0,65	0/1:40,7:46:99:461,0,627	0/1:21,4:24:34.63:54,0,35	0/1:34,0:34:17.35:17,0,282	0/1:26,2:27:48.81:49,0,364	0/1:30,0:27:42.72:43,0,71	0/1:25,2:26:21.91:22,0,266	0/1:27,0:27:63.14:63,0,290	0/0:20,0:18:32.18:0,32,495	0/0:17,1:18:29.23:0,29,563	0/1:26,0:24:25.22:25,0,500	0/1:23,8:31:56.76:57,0,74	0/0:54,0:47:24.18:0,24,370	0/1:23,10:32:99:99,0,247	0/1:21,1:23:30.16:41,0,30	0/0:40,0:40:1.20:0,1,263	1/1:32,1:31:17.94:184,18,0	0/1:27,7:33:99:260,0,565	0/1:20,0:20:14.13:14,0,60	0/1:13,0:13:7.35:7,0,162
chr10	47877048	.	CA	C	1357.13	PASS	AB=0.965;AC=21;AF=0.375;AN=56;BaseQRankSum=13.460;DP=740;FS=126.214;HRun=1;HaplotypeScore=243.4263;InbreedingCoeff=-0.4143;MQ=36.83;MQ0=19;MQRankSum=-9.239;QD=2.58;ReadPosRankSum=-2.880;VQSLOD=-0.4677;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:25:70.43:70,0,169	0/1:14,0:14:87.04:140,0,87	0/0:17,0:7:12.65:0,13,186	0/0:19,0:9:24.08:0,24,299	0/1:31,2:33:21.65:22,0,87	0/1:14,0:11:0:0,0,0	0/0:26,0:26:19.38:0,19,498	0/0:16,0:12:32.27:0,32,375	0/1:14,1:14:30.41:30,0,64	0/1:42,5:47:99:376,0,677	0/1:22,4:25:38.96:39,0,54	0/1:33,0:33:13.75:14,0,298	0/1:28,0:27:29.65:30,0,396	0/1:27,1:25:49.36:49,0,71	0/1:28,0:27:26.97:27,0,301	0/1:25,1:26:69.46:69,0,303	0/0:20,0:18:30.85:0,31,529	0/0:19,0:19:47.41:0,47,666	0/1:22,2:22:26.89:27,0,465	0/1:28,2:30:43.28:43,0,124	0/0:54,0:47:24.56:0,25,381	0/1:32,0:32:91.45:91,0,243	0/1:23,0:23:32:48,0,32	0/0:41,0:41:2.29:0,2,299	1/1:27,5:31:17.96:184,18,0	0/1:32,2:33:99:228,0,587	0/1:19,1:20:16.04:16,0,76	0/1:13,0:13:13.08:13,0,162
chr10	47878010	.	GA	G	1174.76	PASS	AB=0.786;AC=13;AF=0.232;AN=56;BaseQRankSum=-0.147;DP=621;FS=0.000;HRun=14;HaplotypeScore=80.1534;InbreedingCoeff=0.6161;MQ=59.26;MQ0=5;MQRankSum=1.704;QD=7.12;ReadPosRankSum=3.010;VQSLOD=2.8097;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,1:49:99:0,101,916	0/0:9,0:9:15.07:0,15,163	0/0:18,0:6:9.28:0,9,33	0/0:11,1:8:8.73:0,9,71	0/0:26,0:27:40.62:0,41,488	0/1:17,3:20:19.70:20,0,252	0/0:17,4:21:14.84:0,15,269	0/0:35,0:39:15.90:0,16,229	0/1:7,16:23:3.32:209,0,3	0/0:24,2:26:11.44:0,11,368	0/0:17,0:17:15.65:0,16,259	1/1:2,5:7:14.48:92,14,0	1/1:9,14:23:7.03:185,7,0	0/0:6,0:15:5.68:0,6,29	0/1:16,2:18:2.11:2,0,263	0/0:24,0:24:56.60:0,57,477	0/0:43,2:47:56.42:0,56,730	0/0:26,1:32:32.51:0,33,435	0/0:9,0:12:25:0,25,151	0/0:5,0:13:25.83:0,26,142	0/0:4,0:14:5.18:0,5,94	1/1:8,14:22:46.33:311,46,0	1/1:3,16:20:28.75:191,29,0	1/1:9,22:32:0.77:330,1,0	0/0:18,1:18:24.32:0,24,350	0/0:28,1:31:51.69:0,52,592	0/0:5,0:16:14.11:0,14,69	0/0:9,0:9:15.49:0,15,141
chr10	47880981	.	G	GT	20591.13	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-13.343;DP=670;FS=4.319;HRun=2;HaplotypeScore=59.6324;InbreedingCoeff=0.9934;MQ=91.09;MQ0=0;MQRankSum=-7.671;QD=38.85;ReadPosRankSum=4.436;VQSLOD=5.3570;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,35:37:93.31:1337,93,0	0/0:7,0:7:15.05:0,15,186	0/0:34,0:35:93.08:0,93,1094	0/0:21,0:21:57.17:0,57,688	1/1:0,34:33:99:1400,99,0	0/0:22,0:22:54.15:0,54,656	0/0:22,0:22:66.21:0,66,818	1/1:0,33:33:99:1355,99,0	1/1:1,17:18:48.16:683,48,0	1/1:2,21:23:66.20:924,66,0	1/1:0,16:16:42.14:605,42,0	1/1:2,24:26:66.22:950,66,0	1/1:0,24:24:66.22:950,66,0	1/1:1,26:27:60.20:864,60,0	0/0:33,0:33:96.25:0,96,1140	1/1:1,23:24:29.03:869,29,0	1/1:2,25:27:69.23:993,69,0	1/1:0,16:16:45.15:648,45,0	1/1:1,23:24:72.24:1024,72,0	1/1:0,28:28:78.26:1122,78,0	1/1:0,24:24:69.23:994,69,0	1/1:1,31:32:84.24:1186,84,0	1/1:0,18:18:48.14:691,48,0	1/1:1,16:17:39.13:562,39,0	1/1:0,21:21:60.20:864,60,0	1/1:1,31:32:93.30:1318,93,0	1/1:0,24:24:72.24:1037,72,0	1/1:0,5:5:15.05:216,15,0
chr10	47881118	.	GGCACC	G	3166.26	PASS	AB=0.511;AC=3;AF=0.054;AN=56;BaseQRankSum=9.151;DP=748;FS=5.229;HRun=0;HaplotypeScore=138.6817;InbreedingCoeff=0.6340;MQ=84.47;MQ0=0;MQRankSum=-7.102;QD=55.55;ReadPosRankSum=1.639;VQSLOD=4.3931;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,33:34:84.29:1885,84,0	0/0:16,0:16:48.15:0,48,1520	0/0:22,0:22:63.20:0,63,1769	0/0:24,0:24:63.18:0,63,1705	0/0:30,0:30:87.28:0,87,2754	0/0:24,0:24:72.25:0,72,2342	0/0:43,0:43:99:0,129,4086	0/0:30,0:30:90.31:0,90,2701	0/0:21,0:21:60.21:0,60,1994	0/0:23,0:23:69.24:0,69,2103	0/0:21,0:21:63.22:0,63,1974	0/0:32,0:32:96.33:0,96,2994	0/0:20,0:20:60.19:0,60,1921	0/0:36,0:36:99:0,108,3480	0/0:32,0:32:96.32:0,96,3031	0/1:1,22:23:33.73:1388,0,34	0/0:32,0:32:96.33:0,96,3140	0/0:40,0:40:99:0,120,3843	0/0:27,0:27:81.28:0,81,2446	0/0:14,0:14:42.14:0,42,1372	0/0:52,0:52:99:0,157,4949	0/0:17,0:17:51.17:0,51,1585	0/0:18,0:18:51.18:0,51,1669	0/0:31,0:31:93.32:0,93,2942	0/0:31,0:31:93.32:0,93,3009	0/0:32,0:32:96.33:0,96,3171	0/0:19,0:19:57.20:0,57,1843	0/0:4,0:4:12.04:0,12,400
chr10	47881877	.	G	GCAGA	28750.85	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=-13.698;DP=775;FS=4.527;HRun=0;HaplotypeScore=109.1066;InbreedingCoeff=0.9940;MQ=71.17;MQ0=5;MQRankSum=-4.189;QD=47.60;ReadPosRankSum=8.476;VQSLOD=4.9905;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:12,46:58:99:2674,108,0	0/0:7,0:7:12.04:0,12,205	0/0:24,0:24:39.10:0,39,579	0/0:16,0:15:35.78:0,36,521	1/1:8,30:39:72.18:1743,72,0	0/0:24,0:24:66.14:0,66,968	0/0:34,0:34:78.16:0,78,1118	0/0:51,0:51:93.29:0,93,1486	1/1:3,21:24:53.96:1353,54,0	1/1:8,27:35:78.23:1790,78,0	1/1:4,18:22:42.14:1048,42,0	1/1:10,23:33:32.15:1328,32,0	1/1:4,16:20:36.59:901,37,0	1/1:5,16:21:39.61:977,40,0	0/0:15,0:15:39.13:0,39,665	1/1:8,18:26:37.07:903,37,0	1/1:5,33:38:87.30:2180,87,0	1/1:5,20:26:42.14:1053,42,0	1/1:9,15:23:63.01:1207,63,0	1/1:2,16:19:45.10:1066,45,0	1/1:10,24:34:60.21:1496,60,0	1/1:5,16:21:36.12:901,36,0	1/1:3,19:23:51.17:1277,51,0	1/1:7,34:40:69.24:1729,69,0	1/1:4,24:27:60.21:1501,60,0	1/1:7,23:30:72.23:1746,72,0	1/1:5,18:23:48.16:1201,48,0	1/1:0,11:14:27.09:676,27,0
chr10	47882571	.	T	TGATA	30433.52	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=-13.252;DP=804;FS=3.000;HRun=0;HaplotypeScore=132.3761;InbreedingCoeff=0.9986;MQ=76.34;MQ0=11;MQRankSum=-6.916;QD=49.41;ReadPosRankSum=7.115;VQSLOD=5.2795;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,22:26:39.13:993,39,0	0/0:8,0:8:24.08:0,24,410	0/0:25,0:24:56.83:0,57,910	0/0:37,0:37:73.36:0,73,1047	1/1:6,15:21:27.06:689,27,0	0/0:17,0:17:42.06:0,42,661	0/0:24,0:24:51.16:0,51,842	0/0:38,0:38:90.29:0,90,1469	1/1:10,32:41:69.24:1750,69,0	1/1:12,42:54:99:3140,132,0	1/1:1,10:13:21.07:536,21,0	1/1:4,23:27:72.24:1748,72,0	1/1:4,29:33:69.24:1759,69,0	1/1:3,21:27:63.22:1602,63,0	0/0:39,0:39:99:0,108,1824	1/1:3,44:42:99:2598,102,0	1/1:6,24:32:54.08:1378,54,0	1/1:2,24:25:45.15:1145,45,0	1/1:3,15:18:45.15:1113,45,0	1/1:1,19:19:42.14:1073,42,0	1/1:5,32:38:75.26:1915,75,0	1/1:8,19:26:48.16:1220,48,0	1/1:1,19:19:39.13:957,39,0	1/1:7,23:30:60.21:1515,60,0	1/1:4,18:20:33.11:830,33,0	1/1:10,27:37:90.29:2042,90,0	1/1:5,27:33:63.22:1597,63,0	1/1:4,11:15:33.11:837,33,0
chr10	47882612	.	G	GTGGGTGGA	809.65	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=0.789;DP=806;FS=2.211;HRun=0;HaplotypeScore=262.6764;InbreedingCoeff=0.9972;MQ=59.77;MQ0=20;MQRankSum=-2.760;QD=31.14;ReadPosRankSum=-3.929;VQSLOD=2.6417;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:20,6:26:42.21:905,42,0	0/0:9,0:9:24.05:0,24,483	0/0:36,0:27:44.19:0,44,786	0/0:36,0:26:36:0,36,674	0/0:20,0:19:36.08:0,36,818	0/0:15,0:15:41.79:0,42,938	0/0:20,0:20:54.10:0,54,1187	0/0:32,0:32:62.91:0,63,1231	0/0:38,0:37:81.25:0,81,1996	0/0:50,0:49:99:0,99,2051	0/0:24,0:23:39.12:0,39,948	0/0:30,0:29:63.20:0,63,1550	0/0:32,0:31:69.19:0,69,1534	0/0:32,0:32:81.24:0,81,1913	0/0:34,0:34:72.25:0,72,1861	0/0:41,0:36:74.36:0,74,1753	0/0:25,0:25:48.08:0,48,1061	0/0:27,0:26:51.11:0,51,1047	0/0:23,0:21:38.99:0,39,730	0/0:26,0:25:57.12:0,57,1263	0/0:36,0:36:57.04:0,57,1260	0/0:38,0:37:75.11:0,75,1708	0/0:14,0:13:33.01:0,33,714	0/0:27,0:26:53.65:0,54,1148	0/0:28,0:26:54.15:0,54,1265	0/0:38,0:36:75.21:0,75,1706	0/0:30,0:30:66.66:0,67,1593	0/0:19,0:19:51.08:0,51,1156
chr10	47883979	.	TGACAACGTAGCCCA	T	2605.59	PASS	AB=0.538;AC=1;AF=0.018;AN=56;BaseQRankSum=7.796;DP=784;FS=7.154;HRun=0;HaplotypeScore=293.9968;InbreedingCoeff=-0.0182;MQ=89.15;MQ0=0;MQRankSum=-7.923;QD=93.06;ReadPosRankSum=3.342;VQSLOD=2.5649;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:53:99:0,150,9719	0/0:16,0:16:45.15:0,45,3046	0/0:33,0:33:84.27:0,84,4865	0/0:29,0:29:78.10:0,78,3901	0/0:17,0:17:48.16:0,48,3299	0/0:37,0:37:99:0,105,7003	0/0:36,0:36:93.26:0,93,5756	0/0:26,0:26:60.20:0,60,3628	0/0:32,0:32:90.31:0,90,6143	0/0:29,0:29:78.26:0,78,4671	0/0:21,0:21:60.21:0,60,3778	0/0:23,0:23:66.23:0,66,4556	0/0:30,0:30:78.25:0,78,4910	0/0:23,0:23:66.23:0,66,4366	0/0:25,0:25:75.21:0,75,4677	0/1:4,24:28:99:2680,0,140	0/0:20,0:20:60.11:0,60,3497	0/0:24,0:24:63.22:0,63,4072	0/0:16,0:16:48.13:0,48,2559	0/0:27,0:27:66.23:0,66,4342	0/0:48,0:48:99:0,141,9173	0/0:19,0:19:54.19:0,54,3665	0/0:17,0:17:45.15:0,45,2765	0/0:32,0:32:90.31:0,90,5857	0/0:23,0:23:69.24:0,69,4716	0/0:30,0:30:81.28:0,81,5349	0/0:51,0:51:99:0,144,8926	0/0:18,0:18:54.19:0,54,3762
chr10	47884378	.	TTGGAAGGCAGAGGG	T	752.92	PASS	AC=12;AF=0.429;AN=28;BaseQRankSum=4.519;DP=158;FS=5.630;HRun=0;HaplotypeScore=60.6131;InbreedingCoeff=0.6188;MQ=45.86;MQ0=34;MQRankSum=-2.598;QD=37.65;ReadPosRankSum=-1.065;VQSLOD=1.6592;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/0:3,0:3:9.03:0,9,532	0/0:24,0:4:8.82:0,9,294	0/0:40,0:16:26.55:0,27,1435	./.	0/0:11,0:9:15.89:0,16,836	0/0:25,0:25:71.73:0,72,4058	./.	1/1:1,2:3:3.01:36,3,0	./.	./.	1/1:1,2:2:3.01:48,3,0	./.	./.	0/0:11,0:11:26.92:0,27,1504	./.	1/1:3,2:5:6.02:254,6,0	1/1:0,4:4:9.02:279,9,0	0/0:4,0:1:2.99:0,3,23	./.	0/0:3,0:1:3.01:0,3,69	./.	./.	./.	./.	1/1:2,1:2:3.01:127,3,0	./.	1/1:0,1:1:3.01:127,3,0
chr10	47884396	.	TG	T	292.59	PASS	AB=1.000;AC=16;AF=0.400;AN=40;BaseQRankSum=3.435;DP=222;FS=8.457;HRun=2;HaplotypeScore=32.5850;InbreedingCoeff=0.5521;MQ=44.32;MQ0=37;MQRankSum=-4.371;QD=4.96;ReadPosRankSum=0.432;VQSLOD=0.0421;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:7:10.16:0,10,37	0/0:3,0:3:6.02:0,6,80	0/0:19,0:3:8.76:0,9,92	0/0:38,0:14:30.01:0,30,347	./.	0/0:10,0:9:11:0,11,126	0/0:36,0:33:83.73:0,84,1057	0/0:6,0:3:8.68:0,9,50	0/0:2,2:4:0:0,0,0	1/1:2,0:2:4.81:30,5,0	./.	1/1:2,2:4:5.88:53,6,0	./.	0/0:2,0:2:2.37:0,2,8	0/0:12,0:11:24.18:0,24,175	./.	1/1:5,2:6:9.02:101,9,0	1/1:1,3:4:9.02:104,9,0	1/1:1,2:2:3.01:38,3,0	./.	0/1:28,0:16:11.95:12,0,16	./.	./.	0/0:4,3:4:0:0,0,0	./.	1/1:1,4:3:6.01:59,6,0	0/1:3,0:2:0:0,0,0	1/1:2,1:1:3.01:31,3,0
chr10	47884397	.	G	GT	447.17	PASS	AB=0.599;AC=21;AF=0.525;AN=40;BaseQRankSum=3.490;DP=228;FS=7.717;HRun=1;HaplotypeScore=32.9696;InbreedingCoeff=0.5773;MQ=44.44;MQ0=37;MQRankSum=-4.139;QD=5.81;ReadPosRankSum=0.162;VQSLOD=0.0764;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:8:11.56:0,12,79	0/0:4,0:4:6.02:0,6,80	0/0:19,0:3:8.76:0,9,92	0/0:37,0:14:30.01:0,30,347	./.	0/0:10,0:9:11.54:0,12,140	0/0:33,0:32:84.13:0,84,1057	0/0:6,0:3:8.60:0,9,45	1/1:2,2:4:1.25:3,1,0	1/1:0,2:2:6.02:88,6,0	./.	1/1:2,2:4:6.02:85,6,0	./.	1/1:3,1:4:2.88:15,3,0	0/0:5,0:11:26.94:0,27,256	./.	1/1:3,4:6:9.03:121,9,0	1/1:3,1:4:9.02:103,9,0	1/1:3,0:2:3.01:38,3,0	./.	0/1:15,14:18:6.38:23,0,6	./.	./.	0/1:3,4:4:0:0,0,0	./.	1/1:4,1:3:6.02:79,6,0	0/1:0,3:2:0:0,0,0	1/1:3,0:1:3.01:32,3,0
chr10	47884542	.	GT	G	778.28	PASS	AB=0.824;AC=28;AF=0.583;AN=48;BaseQRankSum=4.182;DP=235;FS=16.266;HRun=13;HaplotypeScore=42.0207;InbreedingCoeff=0.3553;MQ=77.75;MQ0=0;MQRankSum=-1.101;QD=4.86;ReadPosRankSum=1.207;VQSLOD=0.4325;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,1:29:39.38:127,39,0	0/0:5,0:5:12.02:0,12,117	0/0:9,1:10:4.39:0,4,129	0/1:8,1:9:15.56:16,0,24	1/1:1,4:5:11.93:87,12,0	0/1:9,2:13:7.82:8,0,112	0/1:14,2:15:4.79:5,0,264	0/0:6,0:16:25.91:0,26,151	./.	1/1:1,4:5:8.92:66,9,0	./.	1/1:1,3:4:5.90:40,6,0	./.	0/0:9,0:9:11.17:0,11,135	0/0:6,1:7:12.01:0,12,112	1/1:2,6:8:8.94:66,9,0	1/1:2,3:7:13.02:77,13,0	1/1:1,1:2:2.98:22,3,0	0/1:16,2:19:4.94:5,0,257	0/0:9,1:11:0.21:0,0,141	0/1:9,5:16:70.72:71,0,162	1/1:0,5:5:14.91:109,15,0	1/1:0,5:5:14.90:107,15,0	1/1:3,4:7:5.60:43,6,0	0/1:3,3:6:17.27:54,0,17	1/1:1,2:3:5.96:44,6,0	0/0:15,0:15:27.03:0,27,257	./.
chr10	47884583	.	TACAACCTGG	T	729.31	PASS	AB=0.811;AC=9;AF=0.161;AN=56;BaseQRankSum=5.544;DP=271;FS=32.334;HRun=0;HaplotypeScore=90.6337;InbreedingCoeff=-0.0477;MQ=72.85;MQ0=4;MQRankSum=-3.879;QD=13.76;ReadPosRankSum=3.235;VQSLOD=-0.3531;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:93.32:0,93,4629	0/0:6,0:6:18.06:0,18,795	0/0:12,0:9:24.08:0,24,1124	0/0:16,0:13:16.96:0,17,1229	0/0:4,0:4:5.91:0,6,303	0/0:12,0:12:36.12:0,36,1763	0/0:15,0:13:39.13:0,39,1817	0/0:17,0:17:48.09:0,48,1882	0/0:3,0:3:6.02:0,6,303	0/0:2,0:2:6.02:0,6,303	0/0:1,0:1:3.01:0,3,152	0/1:4,1:5:88.74:89,0,295	0/0:4,0:4:9.03:0,9,419	0/0:7,0:7:21.07:0,21,1019	0/0:12,0:12:36.12:0,36,1671	0/0:11,0:11:30.10:0,30,1484	0/1:8,4:12:73.71:74,0,1022	0/0:8,0:7:15.05:0,15,726	0/0:11,0:11:33.11:0,33,1534	0/0:11,0:11:33.11:0,33,1542	0/0:23,0:23:66.23:0,66,3272	0/1:11,2:13:99:168,0,1031	0/1:2,1:3:88.69:89,0,263	0/1:5,1:6:86.10:86,0,398	0/1:3,1:3:91.75:92,0,118	0/1:7,2:8:99:171,0,751	0/0:7,0:7:17.64:0,18,873	1/1:0,1:1:3.01:98,3,0
chr10	47885329	.	GT	G	796.55	PASS	AB=0.853;AC=22;AF=0.393;AN=56;BaseQRankSum=1.708;DP=486;FS=7.953;HRun=16;HaplotypeScore=81.0884;InbreedingCoeff=-0.0558;MQ=74.91;MQ0=3;MQRankSum=-0.171;QD=2.62;ReadPosRankSum=3.892;VQSLOD=-0.5351;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:13,0:22:2.38:35,0,2	0/1:6,2:8:19.96:20,0,57	0/0:28,0:14:3.14:0,3,51	0/0:28,0:16:9.08:0,9,37	0/0:23,1:25:14.74:0,15,319	0/1:12,2:14:25.04:25,0,124	0/1:16,2:19:0.24:0,0,200	0/1:23,3:26:26.71:57,0,27	0/1:10,2:13:11.71:12,0,111	0/1:14,2:18:16.07:16,0,108	0/1:12,2:16:6.50:6,0,139	0/1:10,2:12:13.24:13,0,105	0/0:8,0:8:21.27:0,21,146	1/1:11,7:18:23.60:157,24,0	0/0:16,0:17:13.06:0,13,198	0/0:15,0:16:10.06:0,10,173	0/1:22,2:25:20.50:20,0,278	0/1:9,2:13:12.39:12,0,102	1/1:11,10:24:1.52:175,2,0	1/1:9,12:22:27.22:168,27,0	0/1:10,4:15:6.51:101,0,7	0/0:6,0:6:3:0,3,25	0/1:5,0:5:4.88:5,0,21	0/0:11,0:10:15.42:0,15,118	0/0:20,1:22:21.16:0,21,298	0/0:19,0:20:10.74:0,11,177	1/1:7,8:15:4.52:107,5,0	0/1:12,5:17:29.68:30,0,180
chr10	47885456	.	TTTTTTTTTTTTTTTTTTTTTTGG	T	5149.04	PASS	AB=0.725;AC=7;AF=0.125;AN=56;BaseQRankSum=7.635;DP=578;FS=36.472;HRun=0;HaplotypeScore=271.4799;InbreedingCoeff=0.4377;MQ=52.47;MQ0=38;MQRankSum=-4.877;QD=44.01;ReadPosRankSum=6.744;VQSLOD=2.4033;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:75.25:0,75,2999	0/0:3,0:2:6.02:0,6,551	0/0:58,0:12:27.89:0,28,657	0/0:53,0:10:20.85:0,21,531	0/0:20,0:19:53.97:0,54,2048	0/0:14,0:14:33.11:0,33,2262	0/0:13,0:10:27.09:0,27,1888	0/0:25,0:21:42.06:0,42,1802	0/0:12,0:12:36.12:0,36,1716	0/0:22,0:22:60.19:0,60,3012	0/0:18,0:16:45.15:0,45,2218	0/0:14,0:14:42.14:0,42,2155	0/0:10,0:8:24.08:0,24,1353	0/1:17,1:16:73.81:620,0,74	0/0:16,0:14:42.14:0,42,2766	0/1:4,18:22:76:950,0,76	0/0:23,0:20:56:0,56,2690	0/0:21,0:19:51.16:0,51,2544	0/1:11,10:16:26.80:1388,0,27	1/1:9,23:31:35.30:1427,35,0	0/0:5,0:5:8.61:0,9,123	0/0:18,0:17:38.91:0,39,1846	0/0:16,0:15:36.12:0,36,1534	0/0:17,0:15:28.12:0,28,1304	0/0:17,0:16:45.15:0,45,2434	0/0:17,0:16:48.16:0,48,2223	1/1:22,2:23:6.72:764,7,0	0/0:19,0:15:30.08:0,30,1111
chr10	47885457	.	TTTTTTTTTTTTTTTTTTTTTGG	T	4668	PASS	AB=0.902;AC=7;AF=0.125;AN=56;BaseQRankSum=8.535;DP=580;FS=30.018;HRun=0;HaplotypeScore=263.7268;InbreedingCoeff=0.4493;MQ=52.21;MQ0=39;MQRankSum=-4.221;QD=39.90;ReadPosRankSum=6.667;VQSLOD=2.5316;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:75.26:0,75,2815	0/0:3,0:2:6.02:0,6,522	0/0:61,0:13:22.34:0,22,590	0/0:54,0:10:20.66:0,21,501	0/0:21,0:20:56.97:0,57,1959	0/0:14,0:14:33.11:0,33,2107	0/0:13,0:10:27.09:0,27,1807	0/0:23,0:19:36.09:0,36,1624	0/0:12,0:12:36.11:0,36,1527	0/0:21,0:21:57.20:0,57,2751	0/0:19,0:17:48.16:0,48,2159	0/0:14,0:14:42.14:0,42,1979	0/0:10,0:8:24.08:0,24,1273	0/1:18,0:16:43.17:566,0,43	0/0:16,0:14:42.14:0,42,2605	0/1:21,1:22:61.72:875,0,62	0/0:23,0:20:55.99:0,56,2461	0/0:20,0:18:51.15:0,51,2311	1/1:21,1:16:8.88:1223,9,0	1/1:29,2:30:35.49:1354,35,0	0/0:5,0:5:7.42:0,7,113	0/0:18,0:17:38.71:0,39,1687	0/0:16,0:15:36.11:0,36,1386	0/0:17,0:15:27.67:0,28,1193	0/0:17,0:16:45.15:0,45,2225	0/0:17,0:16:48.16:0,48,2044	0/1:16,8:23:20.91:651,0,21	0/0:19,0:15:30.05:0,30,978
chr10	47886532	.	C	CT	2350.55	PASS	AB=0.963;AC=14;AF=0.250;AN=56;BaseQRankSum=3.184;DP=560;FS=5.448;HRun=10;HaplotypeScore=62.3479;InbreedingCoeff=0.7895;MQ=71.99;MQ0=0;MQRankSum=-0.081;QD=15.67;ReadPosRankSum=-2.298;VQSLOD=3.3629;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:37:93.12:0,93,741	0/0:10,0:10:26.94:0,27,218	0/0:13,1:13:20.54:0,21,170	0/1:9,0:10:18.84:19,0,20	0/0:24,0:25:67.94:0,68,545	0/0:13,0:14:37.99:0,38,301	0/0:20,0:20:50.91:0,51,416	0/0:18,0:18:31.48:0,31,247	0/0:22,0:23:17.95:0,18,340	0/0:26,0:26:59.90:0,60,491	0/0:19,0:20:46.97:0,47,375	0/0:25,0:25:29.02:0,29,393	0/0:15,0:15:26.93:0,27,222	1/1:2,22:24:60.12:628,60,0	0/0:19,0:20:55.97:0,56,449	1/1:1,19:20:45.11:480,45,0	0/0:26,0:26:65.89:0,66,542	0/1:23,2:25:7.09:7,0,357	1/1:6,19:25:59.94:599,60,0	1/1:5,14:19:20.47:423,20,0	1/1:5,10:15:21.05:224,21,0	0/0:17,0:19:34.02:0,34,258	0/0:14,1:15:6.97:0,7,264	0/0:20,0:20:47.91:0,48,394	0/0:19,0:19:47.21:0,47,393	0/0:26,0:27:58.93:0,59,474	1/1:3,9:11:15.02:160,15,0	0/0:15,1:16:6.97:0,7,264
chr10	47887001	.	CT	C	743.97	PASS	AB=0.808;AC=19;AF=0.339;AN=56;BaseQRankSum=-2.867;DP=511;FS=0.489;HRun=17;HaplotypeScore=95.9548;InbreedingCoeff=0.0211;MQ=65.09;MQ0=7;MQRankSum=4.518;QD=2.84;ReadPosRankSum=5.590;VQSLOD=-0.1995;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,3:40:27.91:0,28,359	1/1:4,2:6:5.82:33,6,0	0/0:16,0:9:6.61:0,7,47	0/0:22,0:16:14.67:0,15,102	0/1:16,1:17:25.84:26,0,93	0/0:20,1:22:13.24:0,13,190	0/0:23,0:23:37.82:0,38,267	0/0:34,1:35:16.76:0,17,282	1/1:6,8:14:11.48:66,11,0	0/1:12,10:22:2.57:76,0,3	0/1:6,8:14:2.30:72,0,2	0/1:9,1:10:28.76:41,0,29	0/1:17,0:17:5.52:59,0,6	0/0:13,0:12:21.19:0,21,115	0/0:16,0:16:27.87:0,28,192	0/0:3,0:10:8.17:0,8,41	0/1:26,4:29:2.92:179,0,3	1/1:9,1:11:1.61:34,2,0	0/1:15,0:15:14.25:14,0,93	0/0:21,0:21:42.22:0,42,226	0/0:17,0:16:7.76:0,8,46	0/1:2,3:5:10.77:11,0,18	0/1:12,2:14:10.75:11,0,19	0/1:20,6:28:31.48:112,0,31	0/1:5,7:12:10.23:42,0,10	0/1:15,9:22:6.81:65,0,7	0/0:8,0:7:4.99:0,5,24	0/1:16,4:19:50.85:65,0,51
chr10	47896504	.	T	TA	1782.40	PASS	AB=0.929;AC=13;AF=0.232;AN=56;BaseQRankSum=-6.848;DP=420;FS=2.324;HRun=10;HaplotypeScore=43.7873;InbreedingCoeff=0.8765;MQ=75.30;MQ0=2;MQRankSum=-0.842;QD=19.17;ReadPosRankSum=0.520;VQSLOD=4.2846;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:74.87:0,75,613	0/0:8,0:8:23.94:0,24,193	0/0:17,0:17:13.19:0,13,139	0/0:8,0:6:8.64:0,9,56	0/0:26,0:26:62.91:0,63,517	0/0:15,1:16:4.19:0,4,239	0/0:16,0:16:44.95:0,45,369	0/0:16,0:16:29.93:0,30,244	0/0:13,0:13:35.94:0,36,296	0/0:8,0:8:17.97:0,18,148	0/0:19,0:19:50.93:0,51,416	0/0:15,0:15:41.95:0,42,345	0/0:8,0:8:14.96:0,15,123	1/1:2,9:11:24.01:243,24,0	0/0:16,0:16:47.93:0,48,391	1/1:0,10:10:27.07:288,27,0	0/0:23,3:26:33.82:0,34,471	0/0:15,0:15:23.93:0,24,280	1/1:3,13:16:20.47:421,20,0	1/1:4,13:16:39.10:416,39,0	1/1:1,12:13:33.08:352,33,0	0/0:16,0:16:38.90:0,39,316	0/0:17,0:17:41.93:0,42,342	0/0:14,0:14:35.94:0,36,296	0/0:16,0:16:41.92:0,42,342	0/1:12,1:13:2.04:2,0,192	1/1:5,8:12:24.03:245,24,0	0/0:5,0:5:8.97:0,9,74
chr10	47896606	.	G	GA	1471.75	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=4.671;DP=459;FS=11.961;HRun=10;HaplotypeScore=51.8140;InbreedingCoeff=0.8818;MQ=69.15;MQ0=6;MQRankSum=1.555;QD=14.72;ReadPosRankSum=0.454;VQSLOD=2.3631;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:80.84:0,81,661	0/0:12,0:12:26.94:0,27,221	0/0:20,0:12:5.16:0,5,181	0/1:16,0:8:2.78:3,0,71	0/0:17,0:17:38.92:0,39,317	0/0:14,0:14:32.87:0,33,264	0/0:16,0:17:46.98:0,47,375	0/0:29,0:28:77.81:0,78,628	0/0:11,0:11:32.73:0,33,254	0/0:14,0:14:32.94:0,33,271	0/0:14,0:14:35.94:0,36,295	0/0:11,0:11:26.96:0,27,221	0/0:13,0:13:28.96:0,29,245	1/1:2,8:10:7.83:203,8,0	0/0:12,0:12:32.81:0,33,261	1/1:3,8:9:12.03:128,12,0	0/0:34,0:33:95.80:0,96,775	0/0:22,0:21:16.98:0,17,332	1/1:1,15:16:45.08:462,45,0	1/1:3,15:19:44.88:441,45,0	1/1:3,9:12:23.91:226,24,0	0/0:11,0:11:23.95:0,24,193	0/0:11,0:11:23:0,23,178	0/0:13,0:13:29.95:0,30,246	0/0:13,0:12:26.96:0,27,221	0/0:16,1:17:20.39:0,20,293	1/1:4,12:16:18.04:189,18,0	0/0:11,0:12:22.97:0,23,175
chr10	47896990	.	ATATAATAAT	A	1287.08	PASS	AC=12;AF=0.222;AN=54;BaseQRankSum=3.348;DP=240;FS=0.879;HRun=0;HaplotypeScore=82.4890;InbreedingCoeff=0.7523;MQ=65.19;MQ0=1;MQRankSum=-4.691;QD=24.75;ReadPosRankSum=2.156;VQSLOD=2.6119;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:11.04:0,11,368	0/0:4,0:4:12.01:0,12,348	0/0:4,0:4:3.01:0,3,31	0/0:3,0:1:2.68:0,3,11	0/0:11,0:11:30.01:0,30,557	0/0:15,0:15:45.09:0,45,1671	0/0:4,0:4:12:0,12,224	0/0:26,0:26:78.11:0,78,1324	0/0:4,0:4:12.01:0,12,279	0/0:5,0:5:15.03:0,15,260	0/0:11,0:11:32.99:0,33,609	0/0:7,0:7:21.01:0,21,406	0/0:4,0:4:12.01:0,12,163	1/1:3,3:6:3.01:83,3,0	0/0:9,0:9:26.98:0,27,349	1/1:6,2:8:6.02:138,6,0	0/0:23,0:23:56.91:0,57,1269	0/0:26,0:26:66.11:0,66,2372	1/1:7,4:12:21.03:442,21,0	1/1:2,8:10:21:437,21,0	1/1:1,3:4:6.02:137,6,0	0/0:6,0:6:17.98:0,18,151	0/0:3,0:3:5.99:0,6,50	0/0:2,0:2:5.99:0,6,50	0/0:8,0:8:21.05:0,21,512	0/0:3,0:3:9.01:0,9,183	1/1:5,7:12:9.03:212,9,0	./.
chr10	47896991	.	T	TATA	1807.54	PASS	AC=22;AF=0.478;AN=46;BaseQRankSum=-1.005;DP=241;FS=20.165;HRun=0;HaplotypeScore=54.2812;InbreedingCoeff=0.6323;MQ=62.97;MQ0=1;MQRankSum=-2.763;QD=16.28;ReadPosRankSum=-1.434;VQSLOD=1.4387;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:8:8.93:0,9,63	0/0:4,0:4:6.02:0,6,81	./.	./.	1/1:10,0:10:5.22:32,5,0	0/0:15,0:15:9.13:0,9,379	0/0:2,0:2:3.01:0,3,40	0/0:15,0:26:29.19:0,29,192	1/1:5,0:5:2.99:23,3,0	1/1:4,0:7:12:141,12,0	1/1:9,0:11:6.91:80,7,0	1/1:8,0:7:5.97:62,6,0	1/1:3,0:5:9.01:88,9,0	0/0:6,0:6:2.98:0,3,21	0/0:8,0:8:3.01:0,3,40	0/0:8,0:8:2.98:0,3,21	1/1:13,0:25:27.09:347,27,0	1/1:5,21:27:51.17:993,51,0	0/0:12,0:12:14.85:0,15,102	0/0:10,0:10:9.06:0,9,45	0/0:4,0:4:2.98:0,3,21	./.	./.	./.	1/1:4,0:8:9.03:105,9,0	1/1:3,0:4:6.01:68,6,0	0/0:11,0:11:4.97:0,5,40	1/1:1,0:1:3.01:32,3,0
chr10	47897487	.	A	AAAAC	700.28	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-3.647;DP=589;FS=2.353;HRun=0;HaplotypeScore=109.7293;InbreedingCoeff=0.9712;MQ=64.53;MQ0=0;MQRankSum=-1.247;QD=41.19;ReadPosRankSum=0.919;VQSLOD=4.2016;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:69.22:0,69,1104	0/0:11,0:11:30.10:0,30,493	0/0:23,0:19:18.05:0,18,249	0/0:24,0:24:38.29:0,38,651	0/0:18,0:18:45.14:0,45,710	0/0:22,0:22:51.16:0,51,818	0/0:11,0:11:27.01:0,27,389	0/0:20,0:20:36.12:0,36,594	0/0:28,0:28:63.20:0,63,1013	0/0:20,0:20:48.15:0,48,724	0/0:16,0:16:36.12:0,36,588	0/0:24,0:24:51.17:0,51,840	0/0:20,0:20:45.15:0,45,736	0/0:27,0:27:63.18:0,63,989	0/0:31,0:31:78.25:0,78,1262	1/1:4,11:17:33.11:795,33,0	0/0:31,0:31:72.23:0,72,1157	0/0:18,0:18:39.09:0,39,615	0/0:19,0:19:30.08:0,30,461	0/0:19,0:19:45.15:0,45,738	0/0:25,0:26:63.20:0,63,1001	0/0:11,0:11:27.08:0,27,423	0/0:8,0:8:24.06:0,24,346	0/0:29,0:29:61.80:0,62,1059	0/0:21,0:21:54.18:0,54,867	0/0:26,0:26:69.23:0,69,1116	0/0:30,0:30:78.24:0,78,1258	0/0:7,0:7:15.05:0,15,247
chr10	47899352	.	G	GT	7070.40	PASS	AB=0.655;AC=40;AF=0.714;AN=56;BaseQRankSum=-4.180;DP=541;FS=10.219;HRun=11;HaplotypeScore=55.3356;InbreedingCoeff=0.7636;MQ=68.76;MQ0=2;MQRankSum=0.315;QD=17.20;ReadPosRankSum=1.245;VQSLOD=5.4300;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,29:28:63.12:638,63,0	0/0:6,0:6:11.95:0,12,93	0/0:15,0:15:13.48:0,13,85	0/0:6,0:4:3.13:0,3,26	1/1:6,32:39:70.09:848,70,0	0/0:27,0:27:62.72:0,63,485	0/0:13,0:13:29.82:0,30,226	0/0:37,1:38:30.60:0,31,528	1/1:1,15:16:39.08:396,39,0	1/1:9,20:29:39.80:552,40,0	1/1:7,15:22:17.83:373,18,0	1/1:5,16:21:36.07:365,36,0	1/1:1,19:22:44.87:429,45,0	1/1:5,2:21:28.57:167,29,0	0/0:22,0:22:53.76:0,54,416	0/1:4,5:10:11.30:63,0,11	1/1:2,14:16:36.07:363,36,0	1/1:3,22:25:47.26:512,47,0	1/1:4,2:24:60.03:346,60,0	1/1:7,0:23:34.50:188,35,0	0/1:7,0:12:7.36:43,0,7	1/1:3,5:7:12.02:122,12,0	1/1:3,17:21:27.70:445,28,0	1/1:4,2:6:3.01:30,3,0	1/1:4,18:21:27.86:464,28,0	1/1:2,18:20:48.06:475,48,0	1/1:5,0:17:25.57:128,26,0	1/1:0,6:6:12.02:122,12,0
chr10	47901515	.	AT	A	377.94	PASS	AB=0.909;AC=3;AF=0.054;AN=56;BaseQRankSum=3.867;DP=612;FS=4.960;HRun=10;HaplotypeScore=68.8771;InbreedingCoeff=0.6341;MQ=63.38;MQ0=1;MQRankSum=0.321;QD=8.59;ReadPosRankSum=0.170;VQSLOD=2.2416;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:58:99:0,144,1567	0/0:13,0:13:36.09:0,36,390	0/0:9,0:8:14.81:0,15,130	0/0:10,0:7:15.01:0,15,148	0/0:25,0:25:64.85:0,65,665	0/0:19,1:20:28.09:0,28,538	0/0:20,0:21:50.97:0,51,545	0/0:29,0:29:81.19:0,81,884	0/0:17,0:17:48.12:0,48,523	0/0:26,0:26:72.19:0,72,795	0/0:17,0:17:35.88:0,36,398	0/0:18,0:18:41.69:0,42,435	0/0:18,1:19:28.05:0,28,518	0/0:24,0:24:22.08:0,22,471	0/0:21,0:23:56.95:0,57,598	1/1:4,20:24:53.97:469,54,0	0/0:30,0:30:78.21:0,78,863	0/0:21,0:21:56.81:0,57,635	0/0:35,0:33:65.98:0,66,694	0/0:24,0:24:54.35:0,54,653	0/1:18,2:20:13:13,0,326	0/0:16,0:16:45.04:0,45,470	0/0:12,0:12:30.08:0,30,332	0/0:28,0:28:70.64:0,71,778	0/0:15,0:15:36.10:0,36,397	0/0:23,1:25:42.96:0,43,685	0/0:27,0:28:75.03:0,75,807	0/0:4,0:5:14.87:0,15,147
chr10	47903085	.	CT	C	448.90	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=0.582;DP=294;FS=8.926;HRun=2;HaplotypeScore=57.0340;InbreedingCoeff=0.7433;MQ=76.46;MQ0=7;MQRankSum=0.717;QD=8.80;ReadPosRankSum=0.504;VQSLOD=0.4297;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:29.98:0,30,375	0/0:6,0:6:18.03:0,18,244	0/0:22,0:17:50.96:0,51,722	0/0:26,0:16:38.57:0,39,552	0/0:14,0:14:20.97:0,21,245	0/0:10,0:9:27.06:0,27,379	0/0:14,0:12:33.50:0,33,446	0/0:12,0:12:33.58:0,34,495	0/0:13,0:13:12:0,12,137	0/0:8,0:8:24.06:0,24,333	0/0:10,0:10:20.96:0,21,227	0/1:7,0:7:23.43:23,0,138	0/0:7,0:7:18:0,18,223	1/1:1,6:7:9.01:102,9,0	0/0:11,0:10:30.08:0,30,422	1/1:0,7:4:12.04:154,12,0	0/0:11,0:11:12.04:0,12,180	0/0:5,0:5:9.01:0,9,114	1/1:4,4:6:12.02:140,12,0	1/1:7,2:9:3:39,3,0	1/1:1,7:6:6.02:78,6,0	0/0:8,0:8:17.97:0,18,220	0/0:10,0:10:17.78:0,18,246	0/0:8,0:8:5.94:0,6,65	0/0:8,0:8:17.91:0,18,172	0/0:19,0:19:56.64:0,57,772	1/1:0,5:4:6.02:78,6,0	0/0:8,0:8:21.07:0,21,311
chr10	47903086	.	T	TACACA	229.23	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=3.076;DP=291;FS=8.926;HRun=0;HaplotypeScore=72.3953;InbreedingCoeff=0.7378;MQ=76.35;MQ0=10;MQRankSum=0.678;QD=4.68;ReadPosRankSum=0.582;VQSLOD=0.7547;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:29.98:0,30,480	0/0:6,0:6:18.03:0,18,320	0/0:22,0:17:51.05:0,51,946	0/0:26,0:16:38.16:0,38,801	0/0:14,0:14:20.97:0,21,306	0/0:10,0:9:27.06:0,27,544	0/0:14,0:12:33.91:0,34,608	0/0:12,0:12:33.36:0,33,617	0/0:12,0:12:12.04:0,12,261	0/0:8,0:8:24.08:0,24,531	0/0:10,0:10:20.96:0,21,316	0/1:6,0:7:23.40:23,0,241	0/0:7,0:7:18.02:0,18,344	1/1:6,0:7:8.69:116,9,0	0/0:11,0:10:30.10:0,30,651	1/1:7,0:4:11.53:116,12,0	0/0:9,0:9:12.04:0,12,243	0/0:5,0:5:9.03:0,9,198	1/1:4,0:4:11.35:63,11,0	1/1:2,5:7:2.90:16,3,0	1/1:10,0:6:5.72:29,6,0	0/0:9,0:8:17.98:0,18,285	0/0:10,0:10:17.78:0,18,352	0/0:9,0:8:5.98:0,6,86	0/0:8,0:8:17.93:0,18,213	0/0:19,0:19:57.19:0,57,1114	1/1:5,0:4:5.75:30,6,0	0/0:8,0:8:21.07:0,21,415
chr10	47903087	.	TACACACACACACACACAC	T	1703.52	PASS	AB=0.625;AC=15;AF=0.341;AN=44;BaseQRankSum=4.517;DP=313;FS=11.895;HRun=0;HaplotypeScore=126.5032;InbreedingCoeff=0.5824;MQ=72.36;MQ0=12;MQRankSum=-1.932;QD=22.41;ReadPosRankSum=2.014;VQSLOD=1.9681;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:13:1.23:0,1,45	0/0:7,0:7:12.04:0,12,697	0/0:22,0:17:15.05:0,15,446	0/0:25,0:15:11.77:0,12,175	./.	0/0:10,0:9:15.05:0,15,1080	0/0:14,0:12:18.04:0,18,919	0/0:20,0:20:39.13:0,39,1814	1/1:10,1:12:6.02:261,6,0	1/1:7,0:8:9.02:217,9,0	./.	1/1:4,3:7:6.02:271,6,0	1/1:5,1:7:6.02:174,6,0	0/0:9,0:9:6.02:0,6,283	0/0:11,0:10:18.06:0,18,1141	0/0:8,0:5:9.03:0,9,557	./.	0/1:2,1:5:99:236,0,173	0/0:8,0:6:9.03:0,9,408	0/0:7,0:7:3.48:0,3,140	./.	./.	1/1:9,1:10:3.01:49,3,0	./.	1/1:4,3:8:3.01:126,3,0	1/1:13,5:19:15.05:521,15,0	0/0:12,0:11:12.04:0,12,612	0/0:7,1:8:3.01:0,3,171
chr10	47903105	.	CACACACACACACACACACAG	C	1526.34	PASS	AB=1.000;AC=13;AF=0.271;AN=48;BaseQRankSum=4.824;DP=277;FS=13.972;HRun=0;HaplotypeScore=97.1342;InbreedingCoeff=0.3936;MQ=39.93;MQ0=32;MQRankSum=-1.279;QD=24.62;ReadPosRankSum=2.107;VQSLOD=0.9389;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:12:1.16:0,1,45	0/0:6,0:6:12.04:0,12,721	0/0:9,0:5:15.05:0,15,445	0/0:18,0:8:11.77:0,12,175	./.	0/0:12,0:10:18.06:0,18,1356	0/0:18,0:13:19.28:0,19,924	0/0:18,0:18:54.14:0,54,2272	1/1:4,6:10:6.02:258,6,0	0/1:11,0:9:5.14:184,0,5	./.	1/1:7,0:6:6.02:233,6,0	1/1:7,0:6:5.99:147,6,0	0/0:9,0:6:6.02:0,6,286	0/0:10,0:9:18.06:0,18,1165	0/0:6,0:5:10.85:0,11,571	0/0:13,0:12:5.98:0,6,26	0/1:5,0:5:99:201,0,173	0/0:6,0:5:15:0,15,471	0/0:7,0:7:3.48:0,3,140	./.	./.	1/1:6,0:6:3.01:49,3,0	0/0:9,0:7:0:0,0,0	1/1:6,0:6:3.01:115,3,0	0/1:10,0:9:43.87:479,0,44	0/0:12,0:10:12.04:0,12,615	0/0:9,0:6:3.01:0,3,171
chr10	47903168	.	GGGGA	G	334.96	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=3.777;DP=243;FS=13.771;HRun=0;HaplotypeScore=35.5271;InbreedingCoeff=0.6864;MQ=59.08;MQ0=21;MQRankSum=-3.433;QD=6.70;ReadPosRankSum=1.296;VQSLOD=0.1814;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:10:27.09:0,27,567	0/0:4,0:4:9.02:0,9,146	0/0:14,0:7:18.05:0,18,403	0/0:20,0:10:30.10:0,30,610	0/0:5,0:4:6.02:0,6,153	0/0:6,0:5:9.03:0,9,191	0/0:15,0:14:22.19:0,22,481	0/0:23,0:22:57.16:0,57,1268	0/0:5,0:5:6.02:0,6,136	0/0:8,0:8:15.04:0,15,264	0/0:4,0:4:9.03:0,9,205	0/0:7,0:5:10.85:0,11,251	0/0:7,0:6:14.97:0,15,267	1/1:0,11:11:3.01:43,3,0	0/0:9,0:8:15.05:0,15,385	1/1:0,6:5:5.84:35,6,0	0/0:11,0:11:15.05:0,15,352	0/0:4,0:4:11.96:0,12,181	1/1:3,3:5:9.01:107,9,0	1/1:3,4:7:12.92:133,13,0	1/1:6,7:10:2.94:20,3,0	0/0:2,0:2:6.02:0,6,137	0/0:7,0:6:9.03:0,9,146	0/0:10,0:8:15.05:0,15,265	0/0:11,0:8:12.04:0,12,286	0/0:3,0:3:3.01:0,3,43	1/1:0,7:7:9.03:151,9,0	0/0:7,0:5:6.02:0,6,83
chr10	47903979	.	AAAAAC	A	192.99	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.247;DP=441;FS=10.775;HRun=0;HaplotypeScore=80.2320;InbreedingCoeff=0.8691;MQ=65.86;MQ0=2;MQRankSum=-1.414;QD=27.57;ReadPosRankSum=-0.578;VQSLOD=2.4916;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:54.16:0,54,1381	0/0:9,0:9:27.09:0,27,676	0/0:14,0:9:9.03:0,9,236	0/0:16,0:10:23.69:0,24,441	0/0:16,0:16:45.15:0,45,1163	0/0:21,0:21:57.18:0,57,1482	0/0:17,0:17:45.15:0,45,1226	0/0:28,0:28:57.19:0,57,1408	0/0:8,0:8:18.06:0,18,518	0/0:16,0:16:36.12:0,36,872	0/0:15,0:15:36.12:0,36,1001	0/0:16,0:16:39.11:0,39,1039	0/0:4,0:4:12.04:0,12,313	0/0:12,0:12:24.05:0,24,574	0/0:15,0:15:39.13:0,39,976	1/1:0,7:7:15.05:281,15,0	0/0:34,0:34:87.30:0,87,2366	0/0:18,0:18:45.11:0,45,1174	0/0:15,0:15:36.12:0,36,811	0/0:15,0:15:39.13:0,39,1029	0/0:11,0:11:24.08:0,24,628	0/0:7,0:7:15.05:0,15,437	0/0:12,0:12:27.09:0,27,766	0/0:15,0:15:39.13:0,39,1088	0/0:16,0:16:36.12:0,36,986	0/0:20,0:20:54.18:0,54,1491	0/0:27,0:27:66.21:0,66,1726	0/0:13,0:13:18.06:0,18,524
chr10	47904753	.	CTCTCTCTCTCTCTCTCTCTCTCTCTCTCT	C	10938.09	PASS	AB=0.860;AC=22;AF=0.393;AN=56;BaseQRankSum=10.325;DP=458;FS=1.514;HRun=0;HaplotypeScore=322.1384;InbreedingCoeff=0.3866;MQ=43.96;MQ0=21;MQRankSum=-4.219;QD=54.15;ReadPosRankSum=4.357;VQSLOD=3.1844;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:11,2:11:12.30:396,0,12	0/0:11,0:11:28.50:0,28,2042	0/0:14,0:4:9.02:0,9,140	0/0:15,0:8:21.07:0,21,485	0/1:15,1:16:44.09:433,0,44	0/0:20,0:20:43.55:0,44,3069	0/0:25,0:25:65.27:0,65,5282	0/0:26,0:24:69.23:0,69,3000	1/1:7,6:13:11.92:1242,12,0	0/1:19,4:21:99:834,0,129	1/1:10,3:13:10.02:689,10,0	1/1:10,9:19:34.04:2162,34,0	1/1:8,4:12:11.20:1102,11,0	0/0:15,0:14:31.47:0,31,2563	0/0:33,0:32:74.12:0,74,5688	0/0:16,0:16:32.65:0,33,2171	0/1:9,2:11:7.40:408,0,7	0/1:10,1:9:12.22:205,0,12	0/0:21,0:19:54.18:0,54,3268	0/0:24,0:24:37.36:0,37,1647	0/0:19,0:18:31.49:0,31,1965	1/1:7,2:9:19.90:534,20,0	0/1:8,3:11:6.65:560,0,7	0/1:8,1:9:6.65:241,0,7	1/1:9,2:11:8.05:432,8,0	0/1:19,8:26:11.59:1698,0,12	0/0:17,0:17:48.13:0,48,2959	1/1:4,0:2:0.89:2,1,0
chr10	47904776	.	TCTCTCTCTCC	T	2319.55	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=10.374;DP=462;FS=13.770;HRun=0;HaplotypeScore=190.4565;InbreedingCoeff=-0.2796;MQ=49.95;MQ0=19;MQRankSum=-7.269;QD=8.99;ReadPosRankSum=9.659;VQSLOD=0.4564;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:22:22.51:23,0,308	0/0:8,0:8:22.26:0,22,485	0/0:20,0:7:5.90:0,6,103	0/1:27,0:8:26.41:26,0,85	0/1:17,0:17:19.89:20,0,210	0/0:17,0:16:31.28:0,31,547	0/0:27,0:27:64.34:0,64,916	0/0:18,0:16:39.75:0,40,390	0/1:19,0:19:99:256,0,216	0/1:20,0:19:99:150,0,320	0/1:11,0:11:99:127,0,134	0/1:21,0:21:99:460,0,175	0/1:19,0:19:99:221,0,232	0/0:15,0:14:34.27:0,34,748	0/0:32,0:31:61.30:0,61,1078	1/1:5,13:18:15.05:475,15,0	0/1:13,0:13:67.14:67,0,185	0/1:8,0:6:32.52:33,0,97	0/0:13,0:12:32.74:0,33,643	0/0:17,0:17:32.94:0,33,573	0/0:14,0:14:22.08:0,22,377	0/1:12,0:12:90.32:90,0,135	0/1:12,0:12:69.36:69,0,187	0/1:7,0:7:36.20:36,0,80	0/1:11,0:11:71.37:71,0,165	0/1:19,0:18:99:361,0,178	0/0:13,0:13:27.50:0,27,444	0/0:10,0:8:21.76:0,22,159
chr10	47906905	.	TCCACCCAC	T	2215.66	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=-2.449;DP=578;FS=1.002;HRun=0;HaplotypeScore=179.9082;InbreedingCoeff=0.0364;MQ=52.34;MQ0=51;MQRankSum=3.479;QD=5.48;ReadPosRankSum=-3.989;VQSLOD=1.4362;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,15:27:30.08:430,30,0	0/0:9,0:8:18.03:0,18,245	0/0:27,0:10:14.87:0,15,131	0/1:13,0:6:3.92:4,0,80	0/1:30,0:29:78.91:79,0,444	0/0:7,0:5:8.80:0,9,141	0/0:15,0:12:29.31:0,29,268	0/0:31,0:24:53.82:0,54,623	0/0:26,0:23:6.37:0,6,610	0/1:26,0:22:99:115,0,307	0/1:15,0:15:8.12:53,0,8	0/0:17,0:16:21.24:0,21,333	0/1:17,0:16:11.59:12,0,219	1/1:20,0:19:16.29:208,16,0	0/0:8,0:5:15.05:0,15,364	0/1:19,0:19:6.30:119,0,6	0/1:12,0:12:31.17:31,0,340	0/1:16,0:16:54.55:58,0,55	1/1:26,0:20:28.30:413,28,0	1/1:22,0:21:22.57:179,23,0	1/1:45,0:43:12.71:383,13,0	0/1:25,0:25:32.82:33,0,134	0/1:21,0:20:6.69:7,0,44	0/1:17,0:17:73:73,0,109	0/1:24,0:24:98.04:98,0,128	0/1:28,0:26:99:99,0,456	0/0:23,0:22:2.12:0,2,5	0/0:11,0:10:4.08:0,4,170
chr10	47906959	.	CATCCATCT	C	5082.49	PASS	AB=1.000;AC=28;AF=0.500;AN=56;BaseQRankSum=-5.953;DP=582;FS=2.853;HRun=0;HaplotypeScore=170.9079;InbreedingCoeff=0.1214;MQ=61.73;MQ0=15;MQRankSum=5.731;QD=10.93;ReadPosRankSum=1.390;VQSLOD=3.7562;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:38,0:38:16.46:375,16,0	0/0:1,0:1:3.01:0,3,100	0/0:22,0:19:50.25:0,50,558	0/0:13,0:10:29.84:0,30,287	0/1:26,0:24:72.87:73,0,503	0/0:11,0:11:29.99:0,30,509	0/0:21,0:20:49.70:0,50,619	0/1:27,0:24:60.96:249,0,61	0/1:23,0:24:99:137,0,402	0/1:16,0:14:99:162,0,311	1/1:16,0:16:21.05:162,21,0	0/0:15,0:15:20.45:0,20,247	0/1:18,0:17:1.58:2,0,113	1/1:1,22:23:11.05:294,11,0	0/0:14,0:12:36.04:0,36,752	1/1:1,19:20:5.60:146,6,0	0/1:24,0:24:99:134,0,333	0/1:19,0:19:99:127,0,147	1/1:2,21:22:63.10:894,63,0	1/1:1,24:24:62.43:564,62,0	1/1:37,0:37:92.87:1234,93,0	0/1:21,0:21:51.37:51,0,121	0/0:20,0:19:17.82:0,18,112	0/1:23,0:23:4.69:5,0,61	0/1:26,0:26:99:216,0,162	0/1:27,0:27:99:179,0,502	1/1:0,25:25:4.26:28,4,0	0/1:7,0:7:50.03:50,0,143
chr10	47906963	.	CATCT	C	4575.67	PASS	AB=0.892;AC=31;AF=0.554;AN=56;BaseQRankSum=-3.499;DP=574;FS=9.449;HRun=0;HaplotypeScore=137.3880;InbreedingCoeff=0.0317;MQ=62.72;MQ0=9;MQRankSum=-0.422;QD=9.43;ReadPosRankSum=-0.354;VQSLOD=3.6864;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:38,0:38:65.55:519,66,0	0/0:1,0:1:3.01:0,3,80	0/0:25,0:20:53.26:0,53,594	0/0:14,0:11:32.85:0,33,323	0/1:22,0:20:55.02:55,0,398	0/0:13,0:13:32.95:0,33,345	0/0:21,0:20:41.92:0,42,408	1/1:16,8:22:44.45:346,44,0	0/1:20,3:23:33.31:455,0,33	0/1:16,0:15:99:187,0,182	0/1:15,0:15:5.96:152,0,6	0/1:4,12:16:26.07:153,0,26	1/1:5,11:16:14.80:222,15,0	0/1:23,0:23:9.77:72,0,10	0/0:15,0:14:42.03:0,42,578	1/1:19,0:19:5.58:54,6,0	0/1:25,0:25:99:202,0,120	0/1:19,0:19:99:129,0,192	1/1:21,0:21:37.14:364,37,0	1/1:24,0:24:18.01:244,18,0	1/1:37,0:37:68.19:593,68,0	1/1:7,14:21:5.10:71,5,0	0/1:6,13:19:4.55:14,0,5	0/1:4,19:23:10.75:208,0,11	0/1:27,0:27:99:251,0,155	0/1:25,0:25:99:190,0,303	1/1:25,0:25:4.87:29,5,0	0/1:7,0:7:12.83:64,0,13
chr10	47909254	.	G	GAAAC	5700.05	PASS	AB=0.837;AC=11;AF=0.196;AN=56;BaseQRankSum=-3.533;DP=665;FS=5.685;HRun=0;HaplotypeScore=153.1044;InbreedingCoeff=0.6461;MQ=53.53;MQ0=3;MQRankSum=2.081;QD=32.39;ReadPosRankSum=1.977;VQSLOD=4.8581;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:21.60:0,22,343	0/0:10,0:10:12.04:0,12,188	0/0:33,0:22:20.28:0,20,288	0/0:24,0:13:9:0,9,116	0/0:20,0:20:33.03:0,33,477	0/0:22,0:22:42.13:0,42,642	0/0:23,0:23:45.12:0,45,662	0/0:29,0:29:24.07:0,24,340	1/1:12,12:24:36.12:825,36,0	0/0:33,0:33:69.06:0,69,957	0/0:20,0:21:39.05:0,39,566	0/1:14,10:24:40.79:1083,0,41	0/1:28,9:37:9.26:1227,0,9	0/0:15,0:19:35.63:0,36,365	0/0:19,0:19:36.11:0,36,544	0/1:4,0:16:11.82:12,0,102	0/0:25,0:25:18.38:0,18,423	0/0:25,0:25:42.04:0,42,566	0/0:16,0:17:12.03:0,12,170	0/0:24,0:33:53.56:0,54,563	0/0:17,0:18:8.93:0,9,67	1/1:15,6:21:39.13:876,39,0	1/1:21,7:29:39.12:841,39,0	1/1:16,9:25:39.11:836,39,0	0/0:30,0:30:54.16:0,54,810	0/0:25,0:25:50.64:0,51,761	0/0:20,0:26:53.95:0,54,593	0/0:9,0:9:21.07:0,21,332
chr10	47909298	.	CAA	C	762.99	PASS	AB=0.832;AC=5;AF=0.089;AN=56;BaseQRankSum=8.311;DP=688;FS=3.924;HRun=3;HaplotypeScore=188.8678;InbreedingCoeff=-0.0123;MQ=58.47;MQ0=1;MQRankSum=-7.963;QD=6.36;ReadPosRankSum=3.122;VQSLOD=0.4586;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:16:29.47:0,29,267	0/0:9,0:9:24.08:0,24,463	0/0:40,0:32:84.24:0,84,1489	0/0:21,0:17:48.15:0,48,859	0/1:26,0:26:4.98:5,0,892	0/0:26,0:26:78.27:0,78,1504	0/0:25,0:25:75.19:0,75,1367	0/0:29,0:29:87.03:0,87,1206	0/0:18,0:18:45.90:0,46,717	0/0:32,0:31:89.60:0,90,1232	0/0:27,0:27:77.53:0,78,911	0/0:32,0:32:88.66:0,89,1215	0/0:27,0:27:69.01:0,69,952	0/1:11,7:18:10.58:223,0,11	0/0:25,0:25:75.26:0,75,1432	0/0:22,1:23:6.69:0,7,571	0/0:23,0:23:57.14:0,57,747	0/0:25,0:25:71.89:0,72,948	0/1:19,1:20:5.30:5,0,594	0/1:23,10:33:9.38:338,0,9	0/0:11,0:11:21.04:0,21,134	0/0:27,0:27:69.74:0,70,920	0/0:25,0:25:69.32:0,69,911	0/0:29,0:29:78.51:0,79,1051	0/0:39,0:39:99:0,99,1317	0/0:26,0:26:75.07:0,75,1024	0/1:14,9:23:24.27:300,0,24	0/0:13,0:13:38.37:0,38,437
chr10	47909300	.	A	AATC	16566.22	PASS	AB=0.587;AC=41;AF=0.732;AN=56;BaseQRankSum=-5.096;DP=706;FS=4.444;HRun=0;HaplotypeScore=152.4410;InbreedingCoeff=0.8901;MQ=58.44;MQ0=1;MQRankSum=-3.150;QD=31.20;ReadPosRankSum=4.599;VQSLOD=4.9905;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:23:23.64:266,24,0	0/0:8,0:8:21.07:0,21,290	0/0:39,0:31:27.04:0,27,328	0/0:21,0:17:24.07:0,24,320	1/1:8,19:27:15.71:1015,16,0	0/0:26,0:26:60.20:0,60,830	0/0:25,0:26:51.11:0,51,650	0/0:15,0:28:35.65:0,36,236	1/1:9,9:18:33.11:643,33,0	1/1:11,23:35:69.18:1290,69,0	1/1:5,21:26:24.74:1208,25,0	1/1:12,21:33:66.21:1250,66,0	1/1:12,14:27:42.14:832,42,0	1/1:18,0:18:34.26:351,34,0	0/0:27,0:27:66.21:0,66,900	1/1:22,0:22:44.94:599,45,0	1/1:6,17:23:42.14:832,42,0	1/1:8,18:27:51.18:1012,51,0	1/1:21,0:21:31.17:350,31,0	1/1:33,0:33:58.40:606,58,0	1/1:12,0:12:6.70:112,7,0	1/1:15,11:27:36.12:708,36,0	1/1:9,17:26:51.16:976,51,0	1/1:11,16:27:51.18:1009,51,0	1/1:10,29:39:36.78:1444,37,0	0/1:8,17:27:19.71:1030,0,20	1/1:23,0:23:42.05:378,42,0	1/1:2,14:16:33.11:654,33,0
chr10	47909326	.	T	TCATCATCCC	10443.11	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=-1.312;DP=703;FS=7.324;HRun=0;HaplotypeScore=240.2543;InbreedingCoeff=0.8928;MQ=66.17;MQ0=0;MQRankSum=-10.294;QD=59.67;ReadPosRankSum=-3.635;VQSLOD=3.0177;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:28:99:353,0,332	0/0:9,0:9:27.09:0,27,750	0/0:30,0:26:60.64:0,61,1244	0/0:21,0:21:42.17:0,42,1123	0/0:24,0:24:24.81:0,25,436	0/0:25,0:25:75.26:0,75,2115	0/0:28,0:28:75.24:0,75,1828	0/0:28,0:28:81.17:0,81,1403	0/0:14,0:14:33.66:0,34,239	0/0:31,0:30:51.21:0,51,550	0/0:30,0:30:82.45:0,82,673	0/0:29,0:29:50.01:0,50,473	0/0:24,0:24:44.25:0,44,464	1/1:4,7:18:39.13:1472,39,0	0/0:27,0:27:78.27:0,78,2239	1/1:5,0:24:49.95:1050,50,0	0/0:20,0:20:29:0,29,286	0/0:22,0:22:37.99:0,38,332	1/1:6,13:23:63.16:1744,63,0	1/1:7,22:39:93.05:3303,93,0	1/1:2,10:14:12.03:593,12,0	0/0:22,0:22:31.96:0,32,397	0/0:35,0:35:45.92:0,46,729	0/0:24,0:24:60.37:0,60,395	0/0:35,0:35:86.13:0,86,630	0/0:29,0:29:45.67:0,46,752	1/1:4,15:29:48.03:1928,48,0	0/0:21,0:21:52.32:0,52,464
chr10	47909494	.	C	CA	7391.33	PASS	AB=0.618;AC=26;AF=0.464;AN=56;BaseQRankSum=-11.452;DP=645;FS=0.000;HRun=9;HaplotypeScore=64.8382;InbreedingCoeff=0.7544;MQ=82.07;MQ0=0;MQRankSum=-1.393;QD=22.74;ReadPosRankSum=0.880;VQSLOD=5.6244;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,26:29:69.19:763,69,0	0/0:13,0:13:35.99:0,36,313	0/0:21,0:22:33.58:0,34,310	0/0:16,0:16:23.89:0,24,226	1/1:5,29:34:38.07:862,38,0	0/0:31,0:31:89.97:0,90,777	0/0:29,0:29:68.69:0,69,584	0/0:34,0:34:80.72:0,81,696	1/1:2,11:13:24:250,24,0	1/1:5,34:39:79.23:1087,79,0	1/1:3,15:18:3.07:420,3,0	1/1:6,15:21:36.10:398,36,0	1/1:4,18:23:44.95:479,45,0	0/0:12,0:12:35.99:0,36,312	0/0:37,0:37:92.91:0,93,796	0/0:30,0:30:71.96:0,72,622	1/1:2,18:20:48.13:531,48,0	0/1:7,13:20:24.12:263,0,24	0/0:21,0:22:56.01:0,56,475	0/0:29,0:29:68.87:0,69,589	0/0:17,0:17:44.98:0,45,388	0/1:5,16:21:0.97:447,0,1	0/1:10,7:17:0.03:259,0,0	0/1:3,7:10:48.07:202,0,48	1/1:5,16:21:22.07:472,22,0	1/1:4,27:32:75.01:793,75,0	0/0:28,0:28:71.96:0,72,625	1/1:1,6:7:15.04:166,15,0
chr10	47911625	.	GT	G	1541.06	PASS	AB=0.909;AC=13;AF=0.232;AN=56;BaseQRankSum=9.278;DP=372;FS=0.501;HRun=9;HaplotypeScore=36.1340;InbreedingCoeff=0.8764;MQ=67.45;MQ0=0;MQRankSum=1.294;QD=17.92;ReadPosRankSum=1.265;VQSLOD=3.1239;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:32.96:0,33,361	0/0:6,0:6:15.04:0,15,173	0/0:11,0:10:22.11:0,22,200	0/0:10,0:5:7.68:0,8,66	0/0:32,0:32:84.24:0,84,959	0/0:17,0:17:51.14:0,51,578	0/0:6,0:6:15.03:0,15,162	0/0:27,0:27:69.17:0,69,771	0/0:7,0:7:21.05:0,21,232	0/0:25,0:24:72.21:0,72,827	0/0:18,0:18:51.15:0,51,588	0/0:13,0:13:39.10:0,39,440	0/1:9,1:10:3.41:3,0,208	1/1:1,11:12:27.01:247,27,0	0/0:6,0:6:18.05:0,18,208	1/1:0,8:8:21.01:192,21,0	0/0:15,0:15:36.99:0,37,417	0/0:13,0:13:33.10:0,33,380	1/1:5,11:16:32.95:285,33,0	1/1:1,19:20:53.91:471,54,0	1/1:1,3:4:11.04:88,11,0	0/0:3,0:3:9.03:0,9,104	0/0:8,0:8:21.02:0,21,214	0/0:3,0:3:9.03:0,9,104	0/0:19,0:19:51.13:0,51,570	0/0:23,0:23:63.18:0,63,719	1/1:0,16:16:48.03:439,48,0	0/0:11,0:11:29.98:0,30,346
chr10	47912863	.	CT	C	4509.29	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=12.406;DP=749;FS=4.956;HRun=2;HaplotypeScore=80.1453;InbreedingCoeff=0.9932;MQ=93.09;MQ0=0;MQRankSum=-1.388;QD=35.23;ReadPosRankSum=3.159;VQSLOD=5.4885;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,166,2405	0/0:15,0:15:45.15:0,45,673	0/0:33,0:33:86.43:0,86,1292	0/0:31,0:31:83.16:0,83,1170	0/0:21,0:21:63.16:0,63,878	0/0:31,0:31:93.31:0,93,1374	0/0:25,0:25:75.21:0,75,1060	0/0:36,0:36:99:0,108,1570	0/0:28,0:28:75.25:0,75,1105	0/0:34,0:34:99:0,99,1415	0/0:15,0:15:45.11:0,45,613	0/0:31,0:31:90.25:0,90,1301	0/0:24,0:24:72.23:0,72,1058	1/1:1,21:22:60.19:771,60,0	0/0:27,0:27:81.25:0,81,1174	0/0:27,0:27:81.25:0,81,1173	0/0:26,0:26:78.24:0,78,1145	0/0:22,0:22:66.15:0,66,919	1/1:0,18:18:54.12:655,54,0	1/1:0,20:20:51.10:634,51,0	1/1:2,37:39:99:1360,105,0	0/0:17,1:18:12.25:0,12,679	0/0:15,0:15:45.15:0,45,668	0/0:30,0:30:87.28:0,87,1282	0/0:24,0:24:72.22:0,72,1038	0/0:33,0:33:93.30:0,93,1375	1/1:1,28:29:84.27:1088,84,0	0/0:20,0:20:60.20:0,60,899
chr10	47913275	.	A	AT	18069.34	PASS	AC=36;AF=0.667;AN=54;BaseQRankSum=-15.282;DP=693;FS=0.612;HRun=2;HaplotypeScore=61.5478;InbreedingCoeff=1.0000;MQ=87.81;MQ0=0;MQRankSum=-5.184;QD=39.54;ReadPosRankSum=5.956;VQSLOD=4.7891;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,107,1279	0/0:13,0:13:36.11:0,36,446	0/0:23,0:23:53.24:0,53,690	0/0:27,0:27:75.23:0,75,918	1/1:2,23:25:72.15:979,72,0	0/0:29,0:29:87.22:0,87,1051	0/0:21,0:21:60.18:0,60,731	0/0:26,0:26:69.22:0,69,855	1/1:0,17:17:48.16:691,48,0	1/1:1,19:20:57.18:803,57,0	1/1:1,21:22:60.20:864,60,0	1/1:0,26:26:72.24:1037,72,0	1/1:2,19:21:54.18:778,54,0	1/1:0,24:24:69.23:992,69,0	0/0:33,0:33:96.29:0,96,1177	0/0:28,0:28:84.24:0,84,1027	1/1:1,33:34:96.32:1383,96,0	1/1:2,27:29:74.94:1080,75,0	1/1:2,24:25:72.21:1000,72,0	1/1:0,25:25:72.24:1036,72,0	1/1:3,28:31:87.29:1253,87,0	1/1:2,17:19:51.09:688,51,0	1/1:0,21:21:63.21:907,63,0	1/1:1,27:28:75.25:1080,75,0	1/1:1,26:27:75.25:1080,75,0	1/1:1,22:23:63.21:908,63,0	1/1:2,37:39:99:1512,105,0	./.
chr10	47913686	.	TCA	T	4844.78	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=12.093;DP=709;FS=0.000;HRun=0;HaplotypeScore=86.2583;InbreedingCoeff=0.9998;MQ=89.77;MQ0=0;MQRankSum=-1.107;QD=36.70;ReadPosRankSum=2.767;VQSLOD=7.0909;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:60,0:60:99:0,172,3094	0/0:9,0:9:27.09:0,27,495	0/0:29,0:29:72.29:0,72,1380	0/0:32,0:32:90.30:0,90,1562	0/0:23,0:23:66.19:0,66,1113	0/0:16,0:16:45.15:0,45,825	0/0:32,0:32:87.27:0,87,1509	0/0:27,0:27:81.27:0,81,1450	0/0:23,0:23:66.23:0,66,1210	0/0:30,0:30:84.29:0,84,1537	0/0:18,0:18:51.17:0,51,922	0/0:30,0:30:90.29:0,90,1618	0/0:20,0:20:57.18:0,57,1005	1/1:3,24:27:66.22:937,66,0	0/0:38,0:38:99:0,111,1983	1/1:2,17:19:48.16:688,48,0	0/0:28,0:28:81.28:0,81,1474	0/0:25,0:25:72.22:0,72,1286	1/1:1,13:14:39.13:559,39,0	1/1:2,17:19:54.18:770,54,0	1/1:1,35:36:90.30:1290,90,0	0/0:25,0:25:69.22:0,69,1228	0/0:19,0:19:57.18:0,57,1000	0/0:36,0:36:99:0,105,1884	0/0:22,0:22:66.21:0,66,1179	0/0:18,0:18:45.15:0,45,794	1/1:2,15:17:42.14:602,42,0	0/0:17,0:17:51.17:0,51,934
chr10	47915574	.	GA	G	9776.29	PASS	AB=0.536;AC=39;AF=0.696;AN=56;BaseQRankSum=8.850;DP=626;FS=1.840;HRun=10;HaplotypeScore=66.4954;InbreedingCoeff=0.8333;MQ=62.83;MQ0=3;MQRankSum=-0.295;QD=19.47;ReadPosRankSum=5.362;VQSLOD=5.4703;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,49:53:68.61:1053,69,0	0/0:8,1:9:1.02:0,1,239	0/0:16,0:9:12.18:0,12,161	0/0:9,0:8:14.97:0,15,142	1/1:5,28:33:74.82:647,75,0	0/0:16,0:16:36.08:0,36,389	0/0:19,0:19:51.11:0,51,551	0/0:34,1:35:61.15:0,61,883	1/1:1,17:18:35.99:313,36,0	1/1:4,29:33:86.96:752,87,0	1/1:3,20:22:50.97:440,51,0	1/1:3,17:20:13.16:287,13,0	1/1:2,18:19:41.99:365,42,0	1/1:6,14:20:11.80:330,12,0	0/0:18,0:18:45.12:0,45,498	1/1:2,14:15:29.98:260,30,0	1/1:6,33:39:77.57:789,78,0	1/1:3,25:28:57.36:631,57,0	1/1:4,21:24:59.93:509,60,0	1/1:5,12:17:32.98:286,33,0	0/1:2,13:15:9.18:158,0,9	1/1:2,15:17:44.97:386,45,0	1/1:0,25:24:65.88:573,66,0	1/1:6,25:31:32.74:514,33,0	1/1:3,20:22:53.99:469,54,0	1/1:2,19:21:56.99:494,57,0	1/1:1,24:25:59.98:521,60,0	0/0:2,0:2:0:0,0,0
chr10	47917357	.	GA	G	4205.96	PASS	AB=0.950;AC=17;AF=0.304;AN=56;BaseQRankSum=12.189;DP=678;FS=15.513;HRun=11;HaplotypeScore=66.2586;InbreedingCoeff=0.8903;MQ=73.59;MQ0=1;MQRankSum=0.569;QD=16.05;ReadPosRankSum=1.272;VQSLOD=3.0573;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,28:36:52.27:571,52,0	0/0:10,0:11:23.89:0,24,238	0/1:18,1:17:3.60:4,0,162	0/0:14,0:14:3.05:0,3,225	0/0:26,0:26:66.16:0,66,697	0/0:28,0:29:75:0,75,773	0/0:13,0:13:36.04:0,36,365	1/1:8,19:27:21.90:387,22,0	0/0:23,0:23:48.10:0,48,497	0/0:26,0:26:48.27:0,48,705	0/0:25,0:25:51.12:0,51,538	0/0:22,0:22:53.32:0,53,536	0/0:13,0:13:36.07:0,36,375	1/1:6,17:24:46.97:375,47,0	0/0:24,0:24:57.10:0,57,595	1/1:4,24:28:4.95:453,5,0	0/0:33,0:34:80.97:0,81,819	0/0:18,0:17:54.10:0,54,565	1/1:10,21:31:39.77:517,40,0	1/1:2,26:28:42.91:559,43,0	1/1:5,21:26:30.92:461,31,0	0/0:28,1:30:44.36:0,44,661	0/0:29,0:30:84.03:0,84,865	0/0:24,0:24:63.16:0,63,672	0/0:17,0:17:39.09:0,39,410	0/0:28,0:28:72.16:0,72,753	1/1:5,38:43:81.87:879,82,0	0/0:9,0:9:21.05:0,21,224
chr10	47919938	.	T	TCATAC	10144.92	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-11.928;DP=619;FS=0.381;HRun=0;HaplotypeScore=102.5474;InbreedingCoeff=0.9998;MQ=85.18;MQ0=0;MQRankSum=-4.560;QD=68.09;ReadPosRankSum=-0.236;VQSLOD=5.6663;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,105,2134	0/0:11,0:11:30.09:0,30,579	0/0:22,0:22:57.19:0,57,1116	0/0:19,0:19:45.13:0,45,861	0/0:21,0:21:54.19:0,54,1108	0/0:30,0:30:84.27:0,84,1687	0/0:13,0:13:36.12:0,36,735	0/0:40,0:40:96.32:0,96,1915	0/0:22,0:22:66.22:0,66,1301	0/0:21,0:21:51.18:0,51,1046	0/0:15,0:15:42.14:0,42,861	0/0:18,0:18:45.15:0,45,923	0/0:23,0:23:63.22:0,63,1282	1/1:3,12:16:36.12:1078,36,0	0/0:20,0:20:57.20:0,57,1164	1/1:4,21:25:57.20:1720,57,0	0/0:25,0:25:75.26:0,75,1505	0/0:15,0:15:45.15:0,45,908	1/1:11,11:24:48.15:1359,48,0	1/1:4,18:23:60.21:1753,60,0	1/1:2,23:26:63.69:1898,64,0	0/0:11,0:11:33.11:0,33,670	0/0:19,0:19:48.16:0,48,969	0/0:18,0:18:54.17:0,54,1016	0/0:15,0:15:45.15:0,45,888	0/0:41,0:41:99:0,111,2278	1/1:6,27:35:78.27:2335,78,0	0/0:14,0:14:42.14:0,42,862
chr10	47920278	.	GTCAGGGCACACCTT	G	2229.09	PASS	AB=0.745;AC=2;AF=0.036;AN=56;BaseQRankSum=6.795;DP=630;FS=4.538;HRun=0;HaplotypeScore=246.4988;InbreedingCoeff=-0.0377;MQ=76.54;MQ0=0;MQRankSum=-6.934;QD=45.49;ReadPosRankSum=1.667;VQSLOD=3.1588;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:84.29:0,84,4943	0/0:6,0:6:18.06:0,18,1004	0/0:14,0:14:42.14:0,42,2431	0/0:29,0:27:75.26:0,75,4312	0/0:16,0:16:47.89:0,48,2872	0/0:23,0:23:69.22:0,69,4043	0/0:19,0:19:57.20:0,57,3700	0/0:24,0:23:66.22:0,66,3735	0/1:27,1:28:48.44:48,0,4995	0/0:27,0:27:75.24:0,75,4982	0/0:7,0:7:21.07:0,21,1417	0/0:26,0:26:78.27:0,78,5269	0/0:25,0:25:69.24:0,69,4418	0/0:26,0:26:66.21:0,66,4268	0/0:27,0:27:81.28:0,81,5310	0/1:2,19:21:99:2270,0,157	0/0:37,0:37:99:0,108,6638	0/0:17,0:17:51.17:0,51,3077	0/0:10,0:10:30.09:0,30,1905	0/0:18,0:18:54.16:0,54,3221	0/0:58,0:58:99:0,163,10864	0/0:27,0:27:75.23:0,75,4599	0/0:13,0:13:39.13:0,39,2313	0/0:38,0:38:97.25:0,97,6142	0/0:17,0:17:51.16:0,51,3303	0/0:23,0:23:66.22:0,66,4382	0/0:18,0:18:51.18:0,51,3547	0/0:7,0:7:21.07:0,21,1405
chr10	47920314	.	CAGAGGCAG	C	410.16	PASS	AB=0.893;AC=17;AF=0.567;AN=30;BaseQRankSum=3.718;DP=572;FS=7.147;HRun=0;HaplotypeScore=151.4536;InbreedingCoeff=0.5066;MQ=54.82;MQ0=20;MQRankSum=-3.234;QD=2.04;ReadPosRankSum=0.330;VQSLOD=2.1054;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/0:6,0:5:3.01:0,3,121	./.	./.	./.	0/0:23,0:21:15.04:0,15,443	0/0:25,0:25:15.05:0,15,267	./.	0/0:22,0:22:3.01:0,3,39	./.	1/1:10,0:9:3.01:36,3,0	./.	1/1:21,0:21:3.01:56,3,0	1/1:12,9:21:5.98:81,6,0	0/0:23,0:23:12.04:0,12,346	0/0:23,0:23:9.03:0,9,208	./.	1/1:18,0:17:3.01:56,3,0	./.	1/1:15,0:15:2.13:40,2,0	0/1:43,6:49:0:0,0,0	./.	./.	1/1:36,0:35:2.69:55,3,0	./.	./.	1/1:19,3:21:6.02:146,6,0	1/1:8,0:8:3.01:56,3,0
chr10	47920338	.	GAGAGGCAGAGAGGCAGAGAGGCAGAGAGGCAGAGAGGC	G	875.12	PASS	AB=1.000;AC=14;AF=0.280;AN=50;BaseQRankSum=3.250;DP=464;FS=0.000;HRun=0;HaplotypeScore=300.6848;InbreedingCoeff=0.3329;MQ=50.14;MQ0=40;MQRankSum=-0.628;QD=5.54;ReadPosRankSum=0.902;VQSLOD=2.0561;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	0/0:6,0:5:15.05:0,15,1308	./.	0/0:14,0:9:5.99:0,6,62	0/0:7,0:7:9.03:0,9,152	0/0:23,0:17:39.13:0,39,3725	0/0:26,0:25:48.64:0,49,4508	0/0:25,0:13:21.07:0,21,1151	0/1:19,0:18:31.86:32,0,718	0/0:10,0:9:15.05:0,15,455	0/1:8,0:7:47.55:85,0,48	1/1:4,0:4:6.01:67,6,0	1/1:9,13:22:3.01:290,3,0	0/0:19,0:19:27.09:0,27,2014	0/0:24,0:23:54.19:0,54,5448	0/0:22,0:22:48.16:0,48,4328	0/1:24,0:23:26.41:26,0,462	0/1:22,0:21:83.01:83,0,732	0/0:10,0:4:6.02:0,6,504	0/0:11,0:11:13.60:0,14,520	0/0:45,0:44:69.15:0,69,4345	1/1:14,0:13:3.01:41,3,0	./.	1/1:11,23:31:0.97:286,1,0	0/0:10,0:7:9.03:0,9,245	0/0:16,0:14:27.09:0,27,742	0/0:15,0:14:36.12:0,36,2622	1/1:11,0:11:2.06:109,2,0
chr10	47920344	.	CAG	C	192.65	PASS	AB=0.893;AC=16;AF=0.296;AN=54;BaseQRankSum=4.826;DP=445;FS=8.642;HRun=0;HaplotypeScore=65.4358;InbreedingCoeff=0.3381;MQ=49.21;MQ0=43;MQRankSum=-1.915;QD=1.37;ReadPosRankSum=0.521;VQSLOD=0.5135;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:6,1:5:3.01:35,3,0	0/0:7,0:6:18.06:0,18,315	0/0:8,0:2:3.01:0,3,32	0/0:11,0:5:5.98:0,6,61	0/0:5,1:6:9.03:0,9,150	0/0:23,0:17:45.15:0,45,801	0/0:26,0:25:57.20:0,57,1026	0/0:22,0:11:27.09:0,27,485	0/1:16,0:15:31.86:32,0,99	0/1:10,1:9:23.92:24,0,228	0/0:9,0:7:5.75:0,6,65	1/1:2,1:3:6.01:67,6,0	1/1:22,0:22:2.87:15,3,0	0/0:19,0:19:28.91:0,29,482	0/0:22,0:21:54.19:0,54,972	0/0:21,0:21:54.18:0,54,958	0/0:23,0:22:24.07:0,24,371	0/0:24,0:23:4.71:0,5,375	0/0:8,0:3:6.02:0,6,108	0/0:11,0:11:18.05:0,18,292	0/0:45,0:43:78.27:0,78,1404	1/1:8,0:7:3.01:41,3,0	./.	1/1:33,0:30:2.40:15,2,0	0/1:9,4:10:29.14:29,0,140	0/1:14,2:14:76.65:77,0,405	0/0:17,0:16:27.22:0,27,605	1/1:12,0:12:2.50:9,2,0
chr10	47920346	.	GAGAGGCAGAGAGGCAGAGAGGCAGAGAGGC	G	1872.59	PASS	AB=0.816;AC=18;AF=0.360;AN=50;BaseQRankSum=1.540;DP=439;FS=3.396;HRun=0;HaplotypeScore=216.6716;InbreedingCoeff=0.6098;MQ=47.58;MQ0=43;MQRankSum=-3.404;QD=11.02;ReadPosRankSum=-1.614;VQSLOD=2.6620;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:5:0.47:0,0,1	0/0:7,0:6:12.04:0,12,852	0/0:8,0:2:3.01:0,3,73	0/0:10,0:4:3.01:0,3,42	0/1:5,0:5:0:0,0,0	0/0:23,0:17:36.11:0,36,2658	0/0:27,0:26:57.67:0,58,3337	0/0:22,0:11:27.04:0,27,683	0/0:13,0:12:6.02:0,6,526	1/1:11,0:9:6.02:149,6,0	1/1:4,4:6:3.01:214,3,0	./.	1/1:22,0:22:3.01:215,3,0	0/0:19,0:19:30.08:0,30,1288	0/0:20,0:19:48.16:0,48,3708	0/0:21,0:21:48.16:0,48,3033	0/1:10,14:23:0.92:48,0,1	1/1:12,13:24:0.63:230,1,0	0/0:7,0:2:6.02:0,6,313	0/0:11,0:11:13.29:0,13,431	0/0:46,0:44:68.69:0,69,2701	./.	./.	1/1:33,0:30:1.49:212,1,0	1/1:14,0:11:12.04:255,12,0	1/1:16,0:14:17.13:468,17,0	0/0:17,0:16:39.12:0,39,1699	1/1:1,11:12:3.01:234,3,0
chr10	47920352	.	CAG	C	572.21	PASS	AB=0.874;AC=16;AF=0.296;AN=54;BaseQRankSum=5.501;DP=410;FS=7.357;HRun=0;HaplotypeScore=60.3168;InbreedingCoeff=0.4387;MQ=47.75;MQ0=44;MQRankSum=-3.495;QD=4.77;ReadPosRankSum=1.058;VQSLOD=1.2442;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:7,2:7:14.91:132,0,15	0/0:7,0:6:12.04:0,12,206	0/0:10,0:2:5.95:0,6,64	0/0:10,0:4:3.95:0,4,55	./.	0/0:20,0:15:39.12:0,39,673	0/0:27,0:25:63.22:0,63,1134	0/0:23,0:12:36.10:0,36,617	0/1:4,2:5:92.71:97,0,93	0/0:9,0:7:9.03:0,9,149	1/1:6,0:4:3.01:35,3,0	1/1:2,7:9:20.95:278,21,0	1/1:13,0:13:2.84:14,3,0	0/0:19,0:19:34.90:0,35,559	0/0:21,0:20:54.19:0,54,972	0/0:20,0:20:51.17:0,51,914	0/0:20,0:19:1.25:0,1,3	0/1:25,0:24:0.08:10,0,0	0/0:11,0:5:15.04:0,15,242	0/0:12,0:12:18.03:0,18,265	0/0:47,0:45:78.27:0,78,1392	0/0:1,1:1:0:0,0,0	1/1:0,2:2:3.01:41,3,0	1/1:26,0:23:2.84:14,3,0	0/0:13,0:9:12.04:0,12,191	0/1:12,1:11:88.42:88,0,157	0/0:17,0:16:27.19:0,27,600	1/1:11,0:11:2.88:15,3,0
chr10	47920376	.	C	CAG	3997.46	PASS	AB=0.849;AC=23;AF=0.411;AN=56;BaseQRankSum=-1.761;DP=455;FS=4.651;HRun=0;HaplotypeScore=62.5828;InbreedingCoeff=0.6803;MQ=58.64;MQ0=16;MQRankSum=0.879;QD=21.26;ReadPosRankSum=-1.562;VQSLOD=3.1594;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,14:19:28.34:477,28,0	0/0:7,0:7:21.07:0,21,294	0/0:26,0:15:44.87:0,45,570	0/0:27,0:17:38.23:0,38,549	1/1:0,6:6:12.04:215,12,0	0/0:13,0:13:31.34:0,31,459	0/0:30,0:29:63:0,63,838	0/0:18,0:16:45:0,45,503	0/1:4,8:11:48.49:386,0,48	1/1:3,6:8:15.04:232,15,0	0/0:5,0:4:0:0,0,0	1/1:0,20:21:50.73:903,51,0	0/1:15,0:15:3.55:46,0,4	0/0:18,0:18:30.10:0,30,413	0/0:26,0:24:72.20:0,72,956	0/1:17,1:18:62.63:63,0,500	1/1:14,1:15:6.02:106,6,0	0/0:13,0:13:2.37:0,2,8	0/0:12,0:9:27.01:0,27,320	0/0:11,0:11:27.02:0,27,354	0/0:38,0:37:72.04:0,72,985	1/1:2,9:11:18.06:323,18,0	1/1:2,6:8:12.04:215,12,0	1/1:24,0:23:2.88:15,3,0	1/1:2,12:12:30.10:539,30,0	1/1:3,9:12:30.07:476,30,0	0/0:12,0:12:33.08:0,33,427	0/0:11,0:11:2.37:0,2,8
chr10	47920963	.	T	TA	5994.27	PASS	AB=0.762;AC=40;AF=0.714;AN=56;BaseQRankSum=-9.065;DP=337;FS=9.180;HRun=10;HaplotypeScore=31.4336;InbreedingCoeff=0.7258;MQ=64.44;MQ0=4;MQRankSum=0.440;QD=23.23;ReadPosRankSum=1.042;VQSLOD=4.8977;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,20:24:35.51:583,36,0	0/0:2,0:2:3:0,3,25	0/1:5,0:3:0.01:0,0,0	0/0:6,0:5:11.77:0,12,89	1/1:2,15:16:39.10:416,39,0	0/0:20,0:20:53.92:0,54,440	0/0:11,0:11:32.94:0,33,267	0/0:27,1:21:40.06:0,40,324	1/1:2,9:11:27.07:288,27,0	1/1:2,16:18:45.11:479,45,0	1/1:0,7:7:18.05:192,18,0	1/1:6,13:19:20.32:394,20,0	1/1:3,11:14:27.07:288,27,0	1/1:0,9:9:24.06:256,24,0	0/0:12,0:12:32.96:0,33,271	0/1:9,1:10:2.02:2,0,192	1/1:7,23:30:44.53:679,45,0	1/1:0,8:8:21.05:222,21,0	1/1:2,12:15:38.92:391,39,0	1/1:1,12:13:36.09:384,36,0	1/1:0,1:1:3.01:32,3,0	1/1:0,4:4:12.03:128,12,0	1/1:0,4:4:12.03:128,12,0	1/1:1,5:6:15.04:160,15,0	0/1:4,8:12:0.58:200,0,1	1/1:0,11:12:29.14:346,29,0	1/1:2,10:12:24.06:256,24,0	0/1:1,6:7:3.59:171,0,4
chr10	47921992	.	GC	G	4929.41	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=12.476;DP=566;FS=3.893;HRun=1;HaplotypeScore=55.7199;InbreedingCoeff=0.9997;MQ=84.88;MQ0=0;MQRankSum=-3.350;QD=39.12;ReadPosRankSum=1.452;VQSLOD=5.4959;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:90.24:0,90,1364	0/0:9,0:9:27.09:0,27,431	0/0:24,0:24:69.22:0,69,1038	0/0:17,0:17:44.65:0,45,681	0/0:25,0:25:75.23:0,75,1172	0/0:22,0:22:63.21:0,63,1001	0/0:18,0:18:54.06:0,54,757	0/0:32,0:32:96.28:0,96,1504	0/0:18,0:18:54.13:0,54,833	0/0:22,0:22:66.23:0,66,1054	0/0:18,0:18:54.18:0,54,858	0/0:17,0:17:51.17:0,51,807	0/0:25,0:25:75.24:0,75,1158	1/1:0,17:17:45.15:629,45,0	0/0:24,0:24:72.25:0,72,1145	1/1:0,21:21:60.20:839,60,0	0/0:23,0:23:69.19:0,69,1074	0/0:16,0:16:48.16:0,48,766	1/1:0,16:16:48.14:652,48,0	1/1:0,25:25:72.24:1007,72,0	1/1:0,17:17:45.15:629,45,0	0/0:15,0:15:45.14:0,45,692	0/0:15,0:15:42.13:0,42,646	0/0:14,0:14:42.06:0,42,615	0/0:20,0:20:60.16:0,60,887	0/0:22,0:22:66.21:0,66,1030	1/1:0,30:30:84.28:1173,84,0	0/0:13,0:13:36.12:0,36,569
chr10	47926166	.	CT	C	2252.44	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=10.156;DP=500;FS=9.378;HRun=11;HaplotypeScore=49.1688;InbreedingCoeff=0.9609;MQ=65.77;MQ0=1;MQRankSum=-0.613;QD=15.97;ReadPosRankSum=-0.211;VQSLOD=3.6801;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:40,1:40:84.03:0,84,1043	0/0:3,0:3:9.02:0,9,96	0/0:8,1:8:14.91:0,15,132	0/0:7,0:5:9:0,9,85	0/0:27,0:27:69.17:0,69,730	0/0:24,1:25:41.52:0,42,647	0/0:11,0:11:33.08:0,33,352	1/1:10,25:35:13.94:524,14,0	0/0:20,0:19:42.10:0,42,442	0/0:18,0:19:50.96:0,51,520	0/0:17,1:17:33.08:0,33,352	0/0:19,0:19:23.12:0,23,414	0/0:12,0:12:33.07:0,33,344	1/1:3,11:14:35.95:295,36,0	0/0:19,0:19:42.09:0,42,441	1/1:5,15:19:12.96:313,13,0	0/0:19,0:19:45.10:0,45,472	0/0:29,1:29:56.80:0,57,806	1/1:4,10:13:26.87:208,27,0	1/1:5,22:27:62.89:517,63,0	1/1:3,13:16:35.94:296,36,0	0/0:5,0:4:12.02:0,12,121	0/0:11,0:11:30.06:0,30,311	0/0:15,0:15:39.10:0,39,416	0/0:19,0:19:48.12:0,48,512	0/0:17,0:17:42.09:0,42,437	1/1:1,14:15:35.95:295,36,0	0/0:13,0:13:24.05:0,24,248
chr10	47926977	.	G	GT	2206.09	PASS	AB=0.794;AC=12;AF=0.214;AN=56;BaseQRankSum=-1.279;DP=667;FS=3.919;HRun=9;HaplotypeScore=79.0574;InbreedingCoeff=0.8143;MQ=63.59;MQ0=16;MQRankSum=2.867;QD=12.19;ReadPosRankSum=-1.423;VQSLOD=3.1066;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:35:72.38:0,72,664	0/0:14,0:14:29.90:0,30,251	0/0:41,0:13:25.89:0,26,178	0/1:42,0:16:13.53:14,0,77	0/0:37,0:36:30.72:0,31,562	0/0:18,0:18:41.76:0,42,349	0/0:22,0:22:62.65:0,63,513	0/0:41,0:40:77.88:0,78,638	0/0:11,0:11:23.83:0,24,191	0/0:23,0:23:45.01:0,45,425	0/0:27,0:27:56.87:0,57,484	0/0:9,0:8:17.03:0,17,136	0/0:21,0:21:38.74:0,39,289	1/1:12,4:15:10.25:233,10,0	0/0:17,0:17:44.01:0,44,369	0/1:6,14:20:1.99:197,0,2	0/0:38,0:37:77.31:0,77,650	0/0:20,0:19:45.43:0,45,409	1/1:11,23:34:66.19:734,66,0	1/1:7,18:25:47.97:484,48,0	1/1:3,9:12:10.27:99,10,0	0/0:20,0:20:39.06:0,39,317	0/0:18,0:17:35.02:0,35,288	0/0:16,0:15:32.94:0,33,279	0/0:31,0:31:80.31:0,80,660	0/0:15,0:15:38.05:0,38,318	1/1:24,8:30:48.11:621,48,0	0/0:11,0:11:32.93:0,33,274
chr10	47928298	.	CT	C	6475.08	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=13.497;DP=784;FS=4.089;HRun=3;HaplotypeScore=75.7269;InbreedingCoeff=0.9998;MQ=86.24;MQ0=0;MQRankSum=-5.250;QD=32.87;ReadPosRankSum=2.228;VQSLOD=5.4363;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,102,1467	0/0:13,0:13:39.12:0,39,542	0/0:31,0:31:71.25:0,71,1121	0/0:24,0:24:68.98:0,69,927	0/0:33,0:33:93.29:0,93,1303	0/0:24,0:24:66.22:0,66,950	0/0:22,0:22:66.22:0,66,950	0/0:28,0:28:78.25:0,78,1092	0/0:31,0:31:90.29:0,90,1278	0/0:27,0:27:81.24:0,81,1092	0/0:12,0:12:36.12:0,36,518	0/0:32,0:32:93.29:0,93,1290	0/0:32,0:32:93.31:0,93,1338	1/1:0,36:36:99:1299,105,0	0/0:40,0:40:99:0,120,1692	1/1:1,28:29:69.22:855,69,0	0/0:35,0:35:99:0,102,1446	0/0:26,0:26:78.23:0,78,1100	1/1:1,17:18:51.12:585,51,0	1/1:0,36:36:99:1283,105,0	1/1:0,42:42:99:1375,111,0	0/0:33,0:33:96.31:0,96,1365	0/0:17,0:17:51.16:0,51,716	0/0:22,0:22:60.19:0,60,845	0/0:34,0:34:99:0,102,1414	0/0:26,0:26:78.26:0,78,1123	1/1:1,35:36:87.27:1077,87,0	0/0:10,0:10:27.09:0,27,384
chr10	47928704	.	AT	A	7713.88	PASS	AB=0.960;AC=32;AF=0.571;AN=56;BaseQRankSum=-4.459;DP=676;FS=2.216;HRun=10;HaplotypeScore=108.2466;InbreedingCoeff=0.8699;MQ=71.83;MQ0=0;MQRankSum=1.291;QD=18.91;ReadPosRankSum=5.020;VQSLOD=4.6962;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,32:38:83.95:729,84,0	0/0:11,1:12:10.04:0,10,339	0/1:21,2:21:9.30:9,0,283	0/1:19,0:18:4.93:5,0,128	1/1:1,36:37:87.19:891,87,0	0/0:27,0:27:72.16:0,72,784	0/0:18,1:19:22.07:0,22,472	0/0:7,0:34:72.49:0,72,375	1/1:2,9:11:20.98:182,21,0	1/1:9,22:31:65.97:573,66,0	1/1:6,18:24:53.96:469,54,0	1/1:2,20:22:59.98:521,60,0	1/1:3,21:24:29.91:488,30,0	0/0:5,0:28:54.84:0,55,298	0/0:27,0:27:69.17:0,69,754	0/0:4,0:32:66.17:0,66,350	1/1:4,26:30:77.98:677,78,0	1/1:4,16:20:44.97:391,45,0	0/0:4,0:12:31.97:0,32,193	0/0:3,0:29:72.92:0,73,406	0/0:2,0:14:32.06:0,32,160	1/1:2,20:22:59.99:521,60,0	1/1:2,20:22:53.97:469,54,0	1/1:1,18:19:44.99:391,45,0	1/1:3,25:28:68.98:599,69,0	1/1:4,26:30:77.95:669,78,0	0/0:5,0:34:65.65:0,66,336	1/1:0,8:8:15:130,15,0
chr10	47928953	.	CTTTG	C	15844.72	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=13.229;DP=624;FS=0.649;HRun=0;HaplotypeScore=110.7220;InbreedingCoeff=0.9933;MQ=66.87;MQ0=0;MQRankSum=-3.911;QD=45.66;ReadPosRankSum=4.910;VQSLOD=4.9095;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,35:36:87.30:1623,87,0	0/0:6,0:6:18.06:0,18,481	0/0:12,0:11:33.09:0,33,683	0/0:16,0:16:39.13:0,39,916	1/1:1,31:33:87.30:1596,87,0	0/0:23,0:23:60.21:0,60,1594	0/0:7,0:7:18.06:0,18,480	0/0:36,0:36:99:0,108,2776	1/1:2,17:20:42.14:764,42,0	1/1:2,25:27:75.25:1369,75,0	1/1:0,15:15:36.12:671,36,0	1/1:1,22:23:63.22:1176,63,0	1/1:1,25:27:75.25:1334,75,0	0/0:20,0:20:54.19:0,54,1437	0/0:25,0:25:75.26:0,75,1987	0/0:27,0:27:75.26:0,75,2001	1/1:0,15:15:36.12:671,36,0	1/1:0,10:10:27.09:504,27,0	0/0:16,0:16:42.13:0,42,1064	0/0:24,0:24:72.23:0,72,1837	0/0:29,0:29:84.29:0,84,2182	1/1:2,27:29:69.24:1267,69,0	1/1:0,24:24:66.03:1231,66,0	1/1:1,17:18:36.12:672,36,0	1/1:0,28:28:72.24:1286,72,0	1/1:3,26:29:78.27:1456,78,0	0/0:36,0:36:99:0,102,2594	1/1:5,8:13:12.04:224,12,0
chr10	47932378	.	TA	T	1032.75	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-4.722;DP=640;FS=7.904;HRun=5;HaplotypeScore=88.2704;InbreedingCoeff=0.9949;MQ=87.15;MQ0=0;MQRankSum=-2.209;QD=26.48;ReadPosRankSum=-4.142;VQSLOD=1.4361;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:84.28:0,84,1148	0/0:7,0:7:21.07:0,21,287	0/0:25,0:25:60.20:0,60,819	0/0:18,0:18:48.15:0,48,643	0/0:41,0:41:99:0,120,1579	0/0:23,0:23:69.23:0,69,943	0/0:20,0:20:54.18:0,54,738	1/1:4,35:39:99:1128,102,0	0/0:23,0:23:60.20:0,60,820	0/0:32,0:32:93.30:0,93,1257	0/0:29,0:29:84.24:0,84,1088	0/0:20,0:20:60.19:0,60,806	0/0:28,0:28:81.26:0,81,1090	0/0:21,0:21:57.17:0,57,749	0/0:26,0:26:72.23:0,72,969	0/0:20,0:20:57.17:0,57,749	0/0:19,0:19:54.15:0,54,719	0/0:20,0:20:51.17:0,51,692	0/0:17,0:17:48.16:0,48,654	0/0:21,0:21:60.20:0,60,819	0/0:20,0:20:60.20:0,60,820	0/0:17,0:17:48.16:0,48,656	0/0:20,0:20:60.13:0,60,797	0/0:10,0:10:30.09:0,30,395	0/0:18,0:18:48.16:0,48,651	0/0:23,0:23:69.23:0,69,944	0/0:43,0:43:99:0,126,1660	0/0:11,0:11:30.10:0,30,410
chr10	47932891	.	TA	T	9029.98	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=9.206;DP=472;FS=1.706;HRun=2;HaplotypeScore=44.7558;InbreedingCoeff=0.9870;MQ=63.57;MQ0=14;MQRankSum=0.227;QD=32.48;ReadPosRankSum=3.984;VQSLOD=4.4444;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,22:22:45.15:584,45,0	0/0:8,0:8:24.08:0,24,350	0/0:18,0:17:48.16:0,48,700	0/0:12,0:7:18.06:0,18,250	1/1:0,22:22:48.16:621,48,0	0/0:10,0:10:24.08:0,24,353	0/0:14,0:12:36.04:0,36,490	0/0:24,0:22:57.16:0,57,825	1/1:0,12:12:36.07:448,36,0	1/1:0,12:12:33.05:384,33,0	1/1:0,24:24:63.20:818,63,0	1/1:0,6:6:15.05:194,15,0	1/1:0,20:19:48.16:623,48,0	0/0:18,0:18:48.16:0,48,713	0/0:20,0:20:51.09:0,51,714	1/1:0,23:23:63.20:817,63,0	1/1:1,12:13:30.10:388,30,0	1/1:0,13:12:36.12:465,36,0	0/0:17,0:17:48.15:0,48,694	0/0:18,0:18:53.91:0,54,694	0/0:12,0:10:30.07:0,30,425	1/1:0,17:17:42.05:507,42,0	1/1:1,16:17:8.93:509,9,0	1/1:1,18:18:51.17:661,51,0	1/1:0,9:9:21.07:273,21,0	1/1:1,19:20:54.16:687,54,0	0/0:23,0:23:66.22:0,66,979	1/1:2,27:29:81.26:1051,81,0
chr10	47934333	.	ACACACACTG	A	762.92	PASS	AB=0.890;AC=10;AF=0.185;AN=54;BaseQRankSum=6.346;DP=721;FS=1.535;HRun=0;HaplotypeScore=205.6148;InbreedingCoeff=0.3994;MQ=50.45;MQ0=49;MQRankSum=-3.752;QD=6.69;ReadPosRankSum=-1.797;VQSLOD=2.5253;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:25:8.35:0,8,215	0/0:14,0:14:39.09:0,39,1016	0/0:72,0:13:23.66:0,24,477	0/0:84,0:20:44.74:0,45,816	0/0:20,0:20:27.09:0,27,500	0/0:28,0:27:61.22:0,61,2177	0/0:16,0:16:36.04:0,36,1139	0/0:28,0:26:69.33:0,69,1352	0/0:20,0:20:9.76:0,10,459	0/0:29,0:29:75.04:0,75,1308	0/0:21,0:21:18.95:0,19,365	0/0:24,0:24:32.63:0,33,618	0/1:22,0:22:30.42:30,0,567	1/1:4,15:19:8.92:99,9,0	0/0:26,0:25:72.25:0,72,2596	0/0:31,0:31:42.61:0,43,831	0/0:33,0:33:65.06:0,65,1284	0/1:13,0:13:10.99:11,0,532	1/1:3,7:10:17.06:347,17,0	1/1:3,9:11:2.37:70,2,0	./.	0/0:22,0:22:25.01:0,25,488	0/0:17,0:17:6.01:0,6,134	0/1:19,0:19:13.41:13,0,373	0/0:16,0:16:31.88:0,32,531	0/0:33,0:31:77.68:0,78,1499	0/1:4,15:19:39.97:338,0,40	0/0:13,0:13:39.06:0,39,585
chr10	47934339	.	ACTG	A	324.29	PASS	AB=0.967;AC=8;AF=0.143;AN=56;BaseQRankSum=6.046;DP=705;FS=0.796;HRun=0;HaplotypeScore=159.1629;InbreedingCoeff=0.3789;MQ=48.97;MQ0=51;MQRankSum=-3.343;QD=3.21;ReadPosRankSum=-0.708;VQSLOD=2.5835;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,1:25:16.60:0,17,329	0/0:14,0:14:39.09:0,39,786	0/0:70,0:11:24.01:0,24,480	0/0:80,0:16:44.73:0,45,811	0/0:19,0:19:26.98:0,27,448	0/0:25,2:26:24.77:0,25,1301	0/0:16,1:17:44.80:0,45,905	0/0:30,0:26:78.27:0,78,1575	0/0:21,0:21:36.55:0,37,646	0/0:29,0:29:7.71:0,8,1087	0/0:21,0:21:22.92:0,23,336	0/0:22,0:22:33.54:0,34,685	0/0:22,0:22:44.37:0,44,846	1/1:17,1:18:8.79:82,9,0	0/0:25,0:25:72.25:0,72,1584	0/0:28,0:28:51.17:0,51,1027	0/0:32,0:33:41.36:0,41,1161	0/1:11,2:13:10.48:10,0,520	0/1:11,0:9:50.25:205,0,50	1/1:10,0:9:2.06:51,2,0	0/1:32,0:29:0.24:0,0,0	0/0:20,0:20:24.48:0,24,522	0/0:18,0:18:5.53:0,6,134	0/0:18,0:18:23.64:0,24,436	0/0:16,0:16:31.25:0,31,359	0/0:32,0:30:80.54:0,81,1442	0/1:17,0:17:79.63:100,0,80	0/0:14,0:14:38.91:0,39,523
chr10	47934342	.	GCACA	G	2950.13	PASS	AB=0.790;AC=30;AF=0.577;AN=52;BaseQRankSum=5.265;DP=694;FS=7.133;HRun=0;HaplotypeScore=157.8832;InbreedingCoeff=0.3762;MQ=49.30;MQ0=51;MQRankSum=-1.382;QD=7.78;ReadPosRankSum=0.485;VQSLOD=2.3356;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:26:4.47:15,4,0	0/0:14,0:16:23.82:0,24,467	./.	./.	1/1:8,13:21:14.74:236,15,0	0/0:23,0:24:46.22:0,46,784	0/0:16,0:16:26.83:0,27,553	0/0:29,0:25:17.76:0,18,213	0/1:6,0:21:18.47:46,0,18	1/1:16,14:29:47.75:648,48,0	1/1:7,14:22:19.27:287,19,0	0/0:10,0:21:0.64:0,1,37	1/1:6,0:23:14.49:124,14,0	0/0:18,0:18:5.53:0,6,60	0/0:26,0:27:65.69:0,66,1367	0/1:11,0:28:20.93:27,0,21	1/1:17,12:29:5.32:342,5,0	0/1:10,4:14:22.33:238,0,22	1/1:11,0:9:5.77:49,6,0	1/1:10,0:9:1.88:8,2,0	0/1:30,0:27:0:0,0,0	1/1:12,0:19:0.39:1,0,0	1/1:3,0:19:0.17:1,0,0	0/0:10,0:18:4.79:0,5,27	1/1:1,13:16:18.49:415,18,0	0/1:21,6:27:16.39:304,0,16	0/1:17,0:17:66.28:81,0,66	1/1:2,8:11:20.81:295,21,0
chr10	47934650	.	G	GA	738.66	PASS	AB=0.851;AC=18;AF=0.321;AN=56;BaseQRankSum=-0.094;DP=507;FS=1.207;HRun=12;HaplotypeScore=69.6653;InbreedingCoeff=0.2801;MQ=56.00;MQ0=37;MQRankSum=-0.355;QD=4.10;ReadPosRankSum=0.249;VQSLOD=0.8403;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:22:21.93:0,22,63	0/0:7,0:7:17.89:0,18,131	0/0:37,0:7:0.66:0,1,52	0/0:48,0:12:5.65:0,6,52	0/0:13,0:13:19.57:0,20,97	0/1:14,2:15:23.51:24,0,168	0/0:11,0:9:22.90:0,23,158	0/0:26,0:23:14.60:0,15,84	1/1:5,1:4:3:29,3,0	0/0:14,0:13:17.06:0,17,101	0/1:21,0:20:2.13:2,0,97	1/1:7,8:13:17.38:148,17,0	1/1:0,10:10:18.03:175,18,0	0/1:11,1:12:19.53:20,0,148	0/0:16,0:14:31.84:0,32,224	1/1:11,0:11:21.43:88,21,0	0/0:37,0:33:33.50:0,34,181	0/1:27,1:27:20.79:21,0,125	0/0:22,1:22:14.08:0,14,267	0/0:13,0:14:29.28:0,29,190	0/1:8,1:8:8.31:8,0,110	1/1:2,5:7:9.01:86,9,0	0/1:4,9:13:16.77:177,0,17	0/1:3,5:8:6.61:102,0,7	0/0:15,0:15:5.23:0,5,71	0/1:20,2:21:34.37:34,0,118	0/0:26,0:24:28.88:0,29,301	0/0:10,0:8:10.92:0,11,53
chr10	47934653	.	AAAAAAAAAAC	A	689.97	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=1.114;DP=533;FS=9.478;HRun=0;HaplotypeScore=130.2101;InbreedingCoeff=0.7815;MQ=56.63;MQ0=38;MQRankSum=-0.860;QD=25.55;ReadPosRankSum=-3.442;VQSLOD=1.5938;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:22:36.12:0,36,1247	0/0:7,0:7:15.05:0,15,731	0/0:50,0:8:21:0,21,334	0/0:55,0:14:27.85:0,28,436	0/0:13,0:13:27.09:0,27,1081	0/0:17,0:15:39.13:0,39,1714	0/0:12,0:9:24.08:0,24,1135	1/1:13,14:25:48.06:785,48,0	0/0:4,0:2:6.02:0,6,147	0/0:13,0:12:18.06:0,18,610	0/0:21,0:20:37.54:0,38,1372	0/0:16,0:14:21.07:0,21,812	0/0:11,0:11:21.07:0,21,846	0/0:12,0:12:33.11:0,33,1495	0/0:17,0:15:33.11:0,33,1358	0/0:13,0:13:27.55:0,28,589	0/0:38,0:34:45.09:0,45,1668	0/0:29,0:27:48.16:0,48,1889	0/0:25,0:23:54.18:0,54,1998	0/0:14,0:14:30.10:0,30,1033	0/0:10,0:9:27.09:0,27,1058	0/0:7,0:7:9.03:0,9,314	0/0:14,0:14:36.12:0,36,1318	0/0:9,0:9:12.04:0,12,521	0/0:16,0:16:18.06:0,18,748	0/0:22,0:21:54.18:0,54,1942	0/0:26,0:23:57.14:0,57,2053	0/0:10,0:8:12.04:0,12,492
chr10	47934657	.	A	AAC	350.63	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=4.660;DP=547;FS=0.906;HRun=0;HaplotypeScore=81.8015;InbreedingCoeff=0.5734;MQ=58.32;MQ0=35;MQRankSum=-1.454;QD=4.68;ReadPosRankSum=-1.251;VQSLOD=2.5439;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:23:44.76:0,45,359	0/0:8,0:8:21.06:0,21,281	0/0:53,0:10:8.39:0,8,150	0/1:62,0:17:6.68:7,0,123	0/0:13,0:13:33.01:0,33,382	0/0:17,0:15:41.64:0,42,485	0/0:12,0:9:27.03:0,27,348	0/0:28,0:26:47.64:0,48,394	0/0:6,0:4:7.74:0,8,56	0/0:15,0:14:24:0,24,280	0/0:22,0:21:46.02:0,46,509	0/0:13,0:11:19.70:0,20,118	0/0:14,0:14:25.73:0,26,151	0/0:13,0:13:38.83:0,39,469	0/0:15,0:15:39.06:0,39,490	1/1:5,8:13:32.89:444,33,0	0/0:35,0:31:48.15:0,48,649	0/0:30,0:29:52.71:0,53,634	0/0:25,0:23:59.83:0,60,720	0/0:14,0:14:42.02:0,42,496	0/0:10,0:9:26.85:0,27,324	0/0:7,0:7:10.10:0,10,57	0/0:14,0:14:37.21:0,37,268	0/0:10,0:10:14.13:0,14,68	0/0:16,0:16:15.17:0,15,231	0/0:22,0:21:50.01:0,50,618	0/0:24,0:22:40.27:0,40,717	0/0:11,0:9:12.04:0,12,159
chr10	47934663	.	C	CA	2482.62	PASS	AB=0.913;AC=20;AF=0.357;AN=56;BaseQRankSum=-1.806;DP=543;FS=11.276;HRun=12;HaplotypeScore=62.5294;InbreedingCoeff=0.6084;MQ=63.55;MQ0=25;MQRankSum=-0.585;QD=7.59;ReadPosRankSum=2.808;VQSLOD=1.1880;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:25:47.96:0,48,407	0/0:7,0:7:18:0,18,156	0/1:56,0:14:11.22:11,0,106	0/1:64,0:18:1.54:2,0,67	1/1:6,6:13:29.91:306,30,0	0/0:15,0:14:41.92:0,42,351	0/0:9,0:8:23.99:0,24,207	0/1:25,1:24:9.36:14,0,9	0/0:5,0:5:14.32:0,14,104	0/1:5,10:14:1.99:199,0,2	1/1:8,12:19:35.11:354,35,0	0/1:13,1:13:5.18:5,0,134	0/0:16,0:16:32.92:0,33,235	0/0:13,0:13:31.66:0,32,302	0/0:14,0:14:35.99:0,36,311	0/0:5,0:13:4.30:0,4,38	1/1:11,23:32:38.89:405,39,0	1/1:3,27:30:45.12:497,45,0	0/0:27,0:26:60.76:0,61,527	0/0:13,0:13:26.20:0,26,215	0/0:9,0:9:26.92:0,27,225	0/1:8,0:8:5.76:6,0,53	0/0:16,0:16:32.59:0,33,252	0/0:10,0:10:12.56:0,13,82	1/1:0,15:15:18.04:191,18,0	1/1:4,17:20:54.11:574,54,0	0/0:23,0:22:34.18:0,34,378	1/1:3,5:9:11.87:114,12,0
chr10	47934676	.	A	AC	263.29	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.855;DP=535;FS=8.449;HRun=7;HaplotypeScore=74.9229;InbreedingCoeff=0.9196;MQ=71.98;MQ0=10;MQRankSum=-0.736;QD=20.25;ReadPosRankSum=0.535;VQSLOD=2.6915;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:26:54.03:0,54,506	0/0:7,0:7:21.02:0,21,197	0/0:41,0:17:24.93:0,25,245	0/0:51,0:16:17.93:0,18,157	0/0:14,0:14:35.91:0,36,316	0/0:20,0:20:54.06:0,54,510	0/0:13,0:13:30.01:0,30,279	0/0:27,0:27:68.93:0,69,624	0/0:10,0:10:27.03:0,27,256	0/0:18,0:18:36.02:0,36,333	0/0:19,0:19:39.03:0,39,363	0/0:15,0:15:30.03:0,30,284	0/0:14,0:14:39.06:0,39,376	0/0:15,0:15:30.03:0,30,285	0/0:13,0:13:39.05:0,39,372	1/1:1,12:13:32.88:358,33,0	0/0:32,0:32:46.77:0,47,385	0/0:28,0:28:41.95:0,42,366	0/0:31,0:30:72.09:0,72,688	0/0:12,0:12:27.02:0,27,255	0/0:15,0:15:42.06:0,42,405	0/0:6,0:6:14.05:0,14,143	0/0:16,0:16:42.06:0,42,404	0/0:8,0:8:14.96:0,15,128	0/0:16,0:16:24.03:0,24,226	0/0:22,0:22:50.97:0,51,457	0/0:20,0:19:44.29:0,44,426	0/0:8,0:8:12.02:0,12,115
chr10	47938629	.	C	CA	4743.15	PASS	AB=0.661;AC=28;AF=0.500;AN=56;BaseQRankSum=-5.895;DP=569;FS=3.349;HRun=12;HaplotypeScore=62.9811;InbreedingCoeff=0.5505;MQ=62.37;MQ0=8;MQRankSum=0.854;QD=13.67;ReadPosRankSum=2.033;VQSLOD=5.3891;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,24:36:50.35:620,50,0	0/0:5,0:6:10.98:0,11,72	0/1:11,0:8:5.60:6,0,59	0/0:13,0:11:6.31:0,6,68	1/1:4,12:16:8.14:229,8,0	0/0:17,0:19:36.88:0,37,252	0/0:18,0:17:38.73:0,39,283	0/0:28,0:27:29.49:0,29,370	1/1:3,15:18:8.04:227,8,0	1/1:8,14:23:41.04:406,41,0	1/1:9,12:20:8.14:240,8,0	0/1:5,14:20:11.09:200,0,11	1/1:7,14:22:17.10:319,17,0	0/0:18,0:19:31.83:0,32,224	0/0:22,0:26:64.76:0,65,437	0/1:6,12:18:7.76:256,0,8	1/1:5,23:29:37.35:556,37,0	0/1:6,13:19:45.19:250,0,45	0/0:25,0:24:23.39:0,23,320	0/0:21,0:21:31.79:0,32,224	0/0:20,2:22:20.48:0,20,303	1/1:8,9:17:17.22:198,17,0	1/1:6,13:19:4.81:212,5,0	0/1:6,13:19:9.64:280,0,10	0/1:6,13:20:6.59:254,0,7	1/1:9,14:23:17.10:316,17,0	0/0:19,0:21:51.79:0,52,362	1/1:5,10:15:18.03:175,18,0
chr10	47939296	.	GA	G	1056.79	PASS	AB=0.782;AC=25;AF=0.446;AN=56;BaseQRankSum=-2.976;DP=517;FS=4.138;HRun=15;HaplotypeScore=60.6990;InbreedingCoeff=0.3984;MQ=47.73;MQ0=41;MQRankSum=3.528;QD=3.45;ReadPosRankSum=1.143;VQSLOD=0.0481;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:30:54.62:0,55,450	0/0:2,0:2:2.97:0,3,20	0/1:28,2:6:14.44:15,0,14	0/0:20,1:5:9.18:0,9,50	0/1:13,7:20:28.82:93,0,29	0/1:19,2:20:10.10:10,0,173	0/0:18,0:14:27.14:0,27,221	0/0:35,1:32:28.84:0,29,328	1/1:15,5:20:13.29:71,13,0	1/1:8,12:19:2.97:145,3,0	1/1:9,9:18:23.45:167,23,0	1/1:8,1:8:5.80:38,6,0	0/1:16,4:18:23.65:90,0,24	0/0:13,0:15:22.47:0,22,119	0/0:5,0:8:4.25:0,4,29	0/0:13,0:13:29.14:0,29,190	1/1:29,6:28:26.95:185,27,0	1/1:14,6:17:16.74:102,17,0	0/0:9,0:17:40.04:0,40,241	0/0:6,0:16:21.20:0,21,110	0/0:5,0:7:5.84:0,6,40	1/1:7,6:13:11.76:77,12,0	1/1:8,5:12:8.74:57,9,0	0/1:7,4:9:0.90:46,0,1	0/1:6,7:12:13.69:46,0,14	1/1:6,2:8:4.70:34,5,0	0/0:15,0:15:28.34:0,28,173	0/1:17,14:25:53.72:72,0,54
chr10	47940427	.	C	CA	1814.48	PASS	AB=0.834;AC=28;AF=0.500;AN=56;BaseQRankSum=-2.458;DP=486;FS=8.429;HRun=15;HaplotypeScore=63.5218;InbreedingCoeff=-0.0335;MQ=58.05;MQ0=35;MQRankSum=-1.492;QD=4.57;ReadPosRankSum=-1.103;VQSLOD=0.9466;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:17,15:32:0.22:206,0,0	0/0:9,0:9:14.66:0,15,90	0/1:11,0:7:6.20:6,0,39	0/1:12,0:10:11.52:16,0,12	0/1:23,4:27:2.52:199,0,3	0/1:14,2:17:15.95:16,0,133	0/1:10,1:11:13.93:14,0,35	0/1:11,4:15:0.21:94,0,0	1/1:3,4:7:5.16:68,5,0	1/1:14,4:18:5.56:127,6,0	1/1:4,9:12:26.87:210,27,0	0/1:8,7:14:19.54:62,0,20	0/1:7,7:14:3.01:85,0,3	0/0:14,0:13:25.47:0,25,149	0/0:16,0:18:28.33:0,28,167	0/0:7,0:14:20.34:0,20,59	0/1:19,11:28:42.59:140,0,43	1/1:8,7:14:7.10:155,7,0	0/1:21,0:20:14.39:14,0,118	0/0:14,0:14:17.53:0,18,108	0/0:14,0:13:16.61:0,17,93	1/1:9,4:14:12.72:91,13,0	0/1:12,5:17:41.47:111,0,41	1/1:12,11:20:6.33:137,6,0	0/1:14,1:14:3.76:4,0,79	0/1:16,7:21:21.10:163,0,21	0/1:17,3:19:23.36:23,0,185	0/1:14,3:8:9.02:41,0,9
chr10	47940769	.	GGTGT	G	1605.24	PASS	AB=0.812;AC=25;AF=0.500;AN=50;BaseQRankSum=0.951;DP=547;FS=8.318;HRun=0;HaplotypeScore=101.2921;InbreedingCoeff=0.4907;MQ=68.73;MQ0=11;MQRankSum=1.038;QD=6.30;ReadPosRankSum=2.984;VQSLOD=1.6117;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:30:21.05:0,21,394	0/0:6,0:6:2.98:0,3,21	./.	./.	0/0:13,2:15:2.74:0,3,12	0/1:10,1:12:22.62:23,0,301	0/0:25,0:24:20.66:0,21,405	0/0:23,0:21:4.26:0,4,59	1/1:16,5:21:5.66:92,6,0	1/1:13,3:16:4.73:68,5,0	1/1:7,5:12:6.02:93,6,0	1/1:16,5:21:12.30:186,12,0	0/1:9,7:16:25.30:273,0,25	0/0:20,0:27:11.90:0,12,204	0/0:14,0:19:12.03:0,12,182	1/1:10,1:13:9.02:96,9,0	1/1:20,5:25:8.74:139,9,0	0/1:20,3:23:19.21:127,0,19	0/0:12,0:12:6.02:0,6,114	0/0:13,0:14:3.01:0,3,52	0/0:32,0:31:21.54:0,22,368	1/1:14,6:21:17.38:206,17,0	1/1:11,5:16:3.01:47,3,0	1/1:13,7:22:21.06:288,21,0	1/1:12,4:16:3.01:46,3,0	1/1:18,3:21:9.46:93,9,0	0/0:20,0:29:15.86:0,16,186	./.
chr10	47940820	.	G	GA	458.97	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-1.674;DP=476;FS=3.470;HRun=3;HaplotypeScore=69.5749;InbreedingCoeff=0.9824;MQ=61.24;MQ0=16;MQRankSum=-0.569;QD=27.00;ReadPosRankSum=0.952;VQSLOD=2.8293;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:23:40.78:0,41,620	0/0:7,0:7:21.07:0,21,285	0/0:25,0:12:21.11:0,21,354	0/0:28,0:16:26.86:0,27,494	0/0:12,0:12:24.08:0,24,326	0/0:14,0:14:39.10:0,39,515	0/0:15,0:14:39.42:0,39,490	0/0:18,0:16:42.06:0,42,517	0/0:13,0:13:30.09:0,30,393	0/0:15,0:14:29.73:0,30,440	0/0:14,0:14:33.10:0,33,425	0/0:19,0:18:42.08:0,42,533	0/0:16,0:16:41.62:0,42,485	0/0:21,0:21:54.11:0,54,712	0/0:22,0:22:50.85:0,51,607	1/1:3,14:17:40.69:554,41,0	0/0:20,0:20:51.06:0,51,647	0/0:14,0:14:42.13:0,42,554	0/0:14,0:14:30.06:0,30,397	0/0:16,0:14:26.94:0,27,344	0/0:35,0:34:75.55:0,76,1005	0/0:12,0:11:30.09:0,30,381	0/0:14,0:13:27.08:0,27,355	0/0:14,0:14:32.99:0,33,390	0/0:11,0:11:27.07:0,27,336	0/0:13,0:13:33.05:0,33,421	0/0:23,0:22:51.09:0,51,651	0/0:10,0:10:30.06:0,30,395
chr10	47941979	.	G	GAAA	641.89	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.012;DP=535;FS=3.545;HRun=10;HaplotypeScore=79.3699;InbreedingCoeff=0.9765;MQ=65.25;MQ0=5;MQRankSum=-1.004;QD=25.68;ReadPosRankSum=2.841;VQSLOD=2.3897;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:66.08:0,66,760	0/0:13,0:13:33.06:0,33,375	0/0:17,0:14:19.57:0,20,289	0/0:13,0:8:17.94:0,18,179	0/0:24,0:25:57.03:0,57,651	0/0:17,0:17:36.05:0,36,423	0/0:17,0:17:38.85:0,39,441	0/0:30,0:31:67.01:0,67,790	0/0:19,0:19:48.11:0,48,579	0/0:25,0:26:58.27:0,58,692	0/0:18,0:18:51.14:0,51,609	0/0:13,0:12:27.04:0,27,315	0/0:11,0:11:33.10:0,33,401	0/0:18,0:18:45.11:0,45,547	0/0:16,0:17:46.43:0,46,551	1/1:8,13:25:41.75:737,42,0	0/0:27,0:28:68.73:0,69,788	0/0:21,0:21:37.65:0,38,537	0/0:10,0:10:27.06:0,27,316	0/0:24,0:24:54.09:0,54,656	0/0:8,0:8:24.07:0,24,291	0/0:8,0:8:21.02:0,21,242	0/0:18,0:20:40.07:0,40,488	0/0:14,0:16:26.72:0,27,356	0/0:15,0:19:46.28:0,46,524	0/0:25,0:26:64.47:0,64,778	0/0:27,0:27:73.71:0,74,835	0/0:19,0:17:51.12:0,51,590
chr10	47942911	.	A	AT	225.08	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=-3.417;DP=475;FS=1.077;HRun=9;HaplotypeScore=48.1681;InbreedingCoeff=0.6644;MQ=69.85;MQ0=0;MQRankSum=0.759;QD=13.24;ReadPosRankSum=-1.144;VQSLOD=2.7586;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,1:24:32.76:0,33,505	0/0:8,0:8:20.99:0,21,182	0/1:6,0:5:3.35:5,0,3	0/0:8,0:8:4.58:0,5,70	0/0:31,0:31:77.95:0,78,677	0/0:17,0:17:44.97:0,45,391	0/0:11,0:11:32.99:0,33,286	0/0:24,0:24:62.97:0,63,544	0/0:19,0:19:47.97:0,48,413	0/0:18,0:18:41.97:0,42,361	0/0:27,0:27:71.97:0,72,625	0/0:10,0:10:23.97:0,24,205	0/0:14,0:14:35.99:0,36,313	0/0:13,0:13:32.98:0,33,286	0/0:12,0:12:32.99:0,33,287	1/1:1,10:11:7.03:306,7,0	0/0:21,0:21:50.96:0,51,438	0/0:35,0:35:92.93:0,93,803	0/0:16,0:16:41.99:0,42,365	0/0:14,0:14:35.99:0,36,313	0/0:8,0:8:20.99:0,21,182	0/0:10,0:10:26.99:0,27,234	0/0:16,0:16:47.99:0,48,416	0/0:7,0:7:21:0,21,182	0/0:23,0:23:59.98:0,60,521	0/0:23,0:23:56.97:0,57,495	0/0:32,0:32:83.97:0,84,729	0/0:17,0:17:50.99:0,51,443
chr10	47943021	.	AT	A	4031.62	PASS	AB=0.816;AC=30;AF=0.536;AN=56;BaseQRankSum=-0.640;DP=510;FS=10.553;HRun=13;HaplotypeScore=65.6104;InbreedingCoeff=0.8071;MQ=75.98;MQ0=0;MQRankSum=-0.803;QD=13.01;ReadPosRankSum=4.289;VQSLOD=3.1686;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,17:22:18.48:299,18,0	0/0:5,0:6:11.86:0,12,102	0/1:25,0:21:3.61:4,0,76	0/0:13,0:10:1.52:0,2,86	1/1:6,25:31:19.17:467,19,0	0/0:17,0:17:42.35:0,42,384	0/0:7,0:7:17.88:0,18,149	0/0:37,2:40:46.15:0,46,751	1/1:3,10:15:7.70:201,8,0	1/1:3,17:21:54.77:384,55,0	1/1:9,17:27:46.70:334,47,0	1/1:1,9:10:20.88:153,21,0	1/1:2,7:10:22.88:159,23,0	0/0:1,0:13:20.05:0,20,115	0/0:15,0:16:35.89:0,36,331	0/0:4,0:15:34.25:0,34,186	1/1:8,14:22:6.26:173,6,0	1/1:3,12:17:30.91:209,31,0	0/0:4,0:10:20.25:0,20,118	0/0:5,0:19:47.52:0,48,278	0/0:2,0:10:17.04:0,17,85	1/1:0,11:11:32.81:241,33,0	1/1:8,15:23:9.17:233,9,0	1/1:0,6:7:16.94:115,17,0	1/1:1,20:23:60.53:427,61,0	1/1:3,19:22:53.68:394,54,0	0/0:6,0:34:57.57:0,58,304	0/1:9,14:24:13.63:240,0,14
chr10	47943453	.	GGAGGGAGAGAGAGA	G	1671.37	PASS	AB=0.889;AC=39;AF=0.722;AN=54;BaseQRankSum=-0.350;DP=196;FS=3.985;HRun=0;HaplotypeScore=56.7369;InbreedingCoeff=0.4626;MQ=40.32;MQ0=36;MQRankSum=2.667;QD=12.02;ReadPosRankSum=3.730;VQSLOD=1.2075;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:12,0:11:35.28:60,0,35	0/0:4,0:4:6.01:0,6,149	./.	0/0:9,0:4:5.38:0,5,35	1/1:1,4:4:5.95:57,6,0	0/0:6,0:4:9.02:0,9,110	0/0:9,0:7:15.96:0,16,183	0/0:13,0:8:17.70:0,18,130	1/1:8,1:8:17.68:291,18,0	1/1:8,0:6:12.86:131,13,0	1/1:6,0:5:15:227,15,0	1/1:6,0:5:14.71:135,15,0	1/1:9,0:7:14.62:156,15,0	1/1:7,0:6:3.78:47,4,0	0/0:7,0:6:9.27:0,9,68	0/1:9,0:5:15.28:34,0,15	1/1:5,0:3:2.69:59,3,0	1/1:3,0:1:3.01:48,3,0	1/1:4,0:1:2.99:24,3,0	1/1:7,0:6:9.47:79,9,0	1/1:13,0:11:5.38:40,5,0	0/1:3,3:4:0:0,0,0	1/1:4,1:5:8.03:56,8,0	1/1:6,0:4:5.93:65,6,0	1/1:3,0:3:3:26,3,0	1/1:5,0:5:15.04:253,15,0	1/1:5,0:4:2.58:22,3,0	1/1:5,0:3:2.78:26,3,0
chr10	47943526	.	GGAAGAAGAAGAA	G	40.92	PASS	AC=4;AF=0.100;AN=40;BaseQRankSum=1.236;DP=256;FS=3.247;HRun=0;HaplotypeScore=47.9694;InbreedingCoeff=0.3073;MQ=22.12;MQ0=96;MQRankSum=0.768;QD=2.73;ReadPosRankSum=1.102;VQSLOD=1.3524;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:6:4.74:0,5,24	0/0:3,0:1:3.01:0,3,68	./.	./.	0/0:5,2:4:0.94:0,1,2	./.	0/0:9,0:6:0:0,0,0	./.	1/1:5,0:4:3.01:32,3,0	1/1:7,3:8:5.99:97,6,0	0/0:5,0:3:2.97:0,3,21	0/0:7,0:3:2.96:0,3,19	0/0:7,0:3:3.01:0,3,80	0/0:15,0:9:6.49:0,6,153	./.	./.	0/0:17,0:5:0:0,0,0	0/0:9,0:3:2.97:0,3,20	./.	0/0:12,0:9:9.03:0,9,187	0/0:14,0:9:5.98:0,6,56	0/0:5,0:2:1.55:0,2,4	0/0:7,0:4:4.24:0,4,27	0/0:27,0:7:6.02:0,6,103	0/0:7,0:5:2.98:0,3,21	./.	0/0:12,0:7:12.01:0,12,227	0/0:16,0:5:2.37:0,2,8
chr10	47943808	.	A	ATTTGT	854.14	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-3.445;DP=438;FS=1.208;HRun=0;HaplotypeScore=95.1732;InbreedingCoeff=0.8996;MQ=71.05;MQ0=1;MQRankSum=-1.980;QD=77.65;ReadPosRankSum=1.639;VQSLOD=5.3350;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:45.15:0,45,844	0/0:6,0:6:12:0,12,189	0/0:23,0:19:17.98:0,18,267	0/0:28,0:24:38.51:0,39,554	0/0:19,0:19:57.16:0,57,988	0/0:21,0:21:48.16:0,48,901	0/0:17,0:17:24.07:0,24,419	0/0:23,0:23:39.13:0,39,719	0/0:10,0:10:21.07:0,21,394	0/0:12,0:12:27.09:0,27,507	0/0:9,0:9:24.08:0,24,451	0/0:12,0:12:36.08:0,36,639	0/0:13,0:13:33.11:0,33,619	0/0:21,0:21:54.18:0,54,995	0/0:13,0:13:36.11:0,36,643	1/1:1,10:11:33.11:949,33,0	0/0:13,0:12:9.14:0,9,486	0/0:19,0:19:51.17:0,51,957	0/0:16,0:16:27.04:0,27,441	0/0:14,0:14:30.10:0,30,563	0/0:20,0:20:33.10:0,33,587	0/0:8,0:8:24.08:0,24,450	0/0:14,0:14:36.08:0,36,639	0/0:14,0:14:33.11:0,33,619	0/0:11,0:11:30.10:0,30,563	0/0:13,0:13:39.13:0,39,732	0/0:18,0:18:29.84:0,30,563	0/0:22,0:22:63.17:0,63,1088
chr10	47944491	.	GGTGTGTGTGT	G	5370.40	PASS	AC=26;AF=0.481;AN=54;BaseQRankSum=3.305;DP=517;FS=7.134;HRun=0;HaplotypeScore=166.8831;InbreedingCoeff=0.8325;MQ=59.78;MQ0=11;MQRankSum=-6.827;QD=24.41;ReadPosRankSum=1.078;VQSLOD=3.8189;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:27:17.62:0,18,190	0/0:6,0:7:6.02:0,6,201	0/0:28,0:17:3.01:0,3,42	0/0:27,0:12:2.88:0,3,15	1/1:11,8:20:15:350,15,0	0/0:18,0:18:33.11:0,33,1296	0/0:23,0:23:27.07:0,27,863	0/0:25,0:25:24.08:0,24,765	1/1:4,8:13:15.01:359,15,0	1/1:6,9:17:33.11:842,33,0	./.	1/1:11,10:23:26.59:539,27,0	1/1:6,5:13:18.06:499,18,0	0/0:9,0:14:6.02:0,6,262	0/0:14,0:15:33.11:0,33,1331	0/0:15,0:15:18.06:0,18,581	1/1:10,7:17:12:290,12,0	1/1:6,8:14:17.95:365,18,0	0/0:9,0:12:12.04:0,12,507	0/0:14,0:22:8.53:0,9,333	0/0:38,0:38:20.72:0,21,384	1/1:7,9:17:9.03:218,9,0	1/1:7,7:14:9.50:270,10,0	1/1:13,6:19:4.67:94,5,0	1/1:9,12:23:26.92:653,27,0	1/1:6,6:16:32.90:802,33,0	0/0:8,0:14:21.07:0,21,873	1/1:6,6:12:3.01:90,3,0
chr10	47948710	.	GT	G	4322.20	PASS	AB=0.833;AC=33;AF=0.611;AN=54;BaseQRankSum=7.996;DP=394;FS=7.165;HRun=10;HaplotypeScore=44.2178;InbreedingCoeff=0.8252;MQ=57.54;MQ0=17;MQRankSum=3.279;QD=17.50;ReadPosRankSum=2.492;VQSLOD=5.2178;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,0:21:32.35:96,32,0	0/0:5,0:5:12.03:0,12,133	1/1:13,0:3:2.90:16,3,0	0/0:10,0:6:2:0,2,56	1/1:1,19:20:47.98:417,48,0	0/0:21,0:21:54.15:0,54,597	0/0:4,0:4:9.02:0,9,100	0/0:38,1:38:47.68:0,48,878	1/1:1,6:7:17.97:156,18,0	1/1:2,12:13:32.99:286,33,0	1/1:4,16:20:41.95:364,42,0	1/1:0,10:10:24:208,24,0	1/1:2,9:11:23.99:208,24,0	0/0:7,0:7:21.06:0,21,230	0/1:4,1:5:14.02:14,0,88	1/1:2,12:12:29.99:260,30,0	1/1:3,18:19:47.94:410,48,0	1/1:5,9:14:29.01:240,29,0	0/0:11,0:22:55.09:0,55,380	0/0:8,0:10:20.66:0,21,166	0/0:9,0:9:27.05:0,27,288	1/1:0,0:1:2.04:6,2,0	1/1:0,5:5:15:130,15,0	./.	1/1:3,23:25:62.98:547,63,0	1/1:1,16:17:47.99:416,48,0	0/0:18,0:17:48.11:0,48,522	1/1:2,23:25:62.98:547,63,0
chr10	47953507	.	TG	T	4211.26	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=11.828;DP=555;FS=4.077;HRun=4;HaplotypeScore=51.3734;InbreedingCoeff=0.9927;MQ=78.45;MQ0=0;MQRankSum=-0.688;QD=36.30;ReadPosRankSum=1.865;VQSLOD=5.2847;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:66.22:0,66,985	0/0:15,0:15:45.15:0,45,672	0/0:12,0:12:33.11:0,33,495	0/0:15,0:15:45.15:0,45,647	0/0:25,0:25:69.21:0,69,995	0/0:29,0:29:87.29:0,87,1298	0/0:16,0:16:45.15:0,45,673	0/0:28,0:28:84.28:0,84,1258	0/0:15,0:15:45.15:0,45,673	0/0:29,0:29:87.29:0,87,1284	0/0:16,0:16:48.16:0,48,718	0/0:24,0:24:72.24:0,72,1068	0/0:16,0:16:45.15:0,45,669	1/1:0,16:16:45.15:584,45,0	0/0:17,0:17:51.17:0,51,763	0/0:19,0:19:57.19:0,57,853	0/0:22,0:22:66.20:0,66,962	0/0:17,0:17:48.16:0,48,710	1/1:0,24:24:72.20:901,72,0	1/1:0,37:37:99:1402,108,0	1/1:0,12:12:33.11:429,33,0	0/0:20,0:20:60.19:0,60,878	0/0:18,0:18:54.18:0,54,806	0/0:17,0:17:51.17:0,51,764	0/0:30,0:30:90.30:0,90,1349	0/0:13,0:13:36.12:0,36,539	1/1:0,27:27:69.22:896,69,0	0/0:4,0:4:12.04:0,12,180
chr10	47954628	.	CT	C	696.96	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.934;DP=636;FS=1.718;HRun=4;HaplotypeScore=58.3147;InbreedingCoeff=0.9924;MQ=81.51;MQ0=0;MQRankSum=-3.049;QD=30.30;ReadPosRankSum=0.176;VQSLOD=3.6435;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,23:23:66.20:792,66,0	0/0:11,0:11:33.11:0,33,462	0/0:15,0:15:18.80:0,19,429	0/0:21,0:21:54.10:0,54,686	0/0:34,0:34:99:0,99,1335	0/0:26,0:26:78.25:0,78,1074	0/0:13,0:13:39.13:0,39,546	0/0:31,0:31:81.26:0,81,1105	0/0:25,0:25:72.23:0,72,987	0/0:23,0:23:66.22:0,66,924	0/0:22,0:22:66.21:0,66,905	0/0:24,0:24:69.23:0,69,966	0/0:19,0:19:54.13:0,54,717	0/0:16,0:16:45.15:0,45,630	0/0:27,0:27:75.25:0,75,1050	0/0:26,0:26:75.24:0,75,1034	0/0:25,0:25:75.22:0,75,1010	0/0:15,0:15:45.11:0,45,608	0/0:22,0:22:54.17:0,54,729	0/0:33,0:33:96.31:0,96,1324	0/0:18,0:18:48.14:0,48,654	0/0:29,0:29:87.28:0,87,1202	0/0:20,0:20:60.19:0,60,823	0/0:22,0:22:63.19:0,63,863	0/0:26,0:26:78.26:0,78,1091	0/0:26,0:26:78.24:0,78,1062	0/0:31,0:31:93.30:0,93,1284	0/0:13,0:13:30.10:0,30,420
chr10	47955089	.	ATGTGTGTGTGTG	A	10995.03	PASS	AB=0.668;AC=28;AF=0.500;AN=56;BaseQRankSum=11.712;DP=752;FS=2.023;HRun=0;HaplotypeScore=243.2376;InbreedingCoeff=0.8102;MQ=54.46;MQ0=10;MQRankSum=-11.002;QD=27.28;ReadPosRankSum=1.995;VQSLOD=4.1649;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:14,1:46:0.28:323,0,0	0/0:10,0:10:18.06:0,18,891	0/0:42,0:15:12.04:0,12,418	0/0:42,0:11:5.99:0,6,166	1/1:8,14:23:6.02:210,6,0	0/0:16,0:17:39.13:0,39,2091	0/0:19,0:19:36.12:0,36,1662	0/0:25,0:32:57.17:0,57,1598	1/1:6,24:32:42.14:1318,42,0	1/1:14,17:31:41.11:1407,41,0	1/1:4,16:20:3.01:105,3,0	1/1:6,22:29:42.14:1448,42,0	1/1:6,19:26:33.11:1133,33,0	0/0:26,0:31:57.18:0,57,2926	0/0:28,0:30:78.27:0,78,4164	0/0:10,0:26:26.57:0,27,398	0/1:15,15:31:2.93:591,0,3	1/1:13,5:17:5.53:188,6,0	0/0:24,0:25:37.54:0,38,1282	0/0:16,0:16:27.09:0,27,1300	0/0:35,0:38:78.27:0,78,3806	1/1:3,15:22:18.06:609,18,0	0/1:11,10:21:0:0,0,0	1/1:13,22:36:9.03:311,9,0	1/1:7,18:26:39.13:1186,39,0	1/1:11,18:30:54.18:1538,54,0	0/0:18,0:18:38.49:0,38,2074	1/1:3,8:11:18.06:630,18,0
chr10	47955763	.	AAAAC	A	8551.82	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=0.938;DP=617;FS=1.752;HRun=0;HaplotypeScore=117.7337;InbreedingCoeff=0.9795;MQ=70.11;MQ0=5;MQRankSum=-0.017;QD=27.86;ReadPosRankSum=3.708;VQSLOD=4.7766;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,12:22:21.93:561,22,0	0/0:7,0:7:18.05:0,18,356	0/0:32,0:19:18.46:0,18,378	0/0:32,0:23:9.50:0,10,178	1/1:7,14:21:36.12:563,36,0	0/0:28,0:28:63.19:0,63,1412	0/0:12,0:12:24.07:0,24,528	0/0:29,0:39:57.18:0,57,1031	1/1:3,11:14:21.07:335,21,0	1/1:9,15:24:45.14:695,45,0	1/1:5,20:25:62.97:889,63,0	1/1:6,12:18:30.10:479,30,0	1/1:5,9:14:21.07:336,21,0	0/0:9,0:26:51.14:0,51,836	0/0:24,0:24:54.19:0,54,1267	0/0:13,0:13:33.10:0,33,730	1/1:14,22:37:53.74:831,54,0	1/1:13,10:23:9.90:377,10,0	0/0:13,0:25:42.14:0,42,723	0/0:9,0:26:54.18:0,54,891	0/0:5,0:13:15.05:0,15,264	1/1:4,11:15:27.09:431,27,0	1/1:13,13:26:45.15:706,45,0	1/1:4,12:16:27.09:431,27,0	1/1:3,12:15:33.11:527,33,0	1/1:5,11:16:33.11:527,33,0	0/0:14,0:31:57.19:0,57,950	1/1:5,16:21:54.18:862,54,0
chr10	47956678	.	AAC	A	3098.75	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=11.319;DP=487;FS=2.012;HRun=0;HaplotypeScore=56.9030;InbreedingCoeff=0.9742;MQ=74.82;MQ0=0;MQRankSum=-0.827;QD=31.62;ReadPosRankSum=1.811;VQSLOD=5.5316;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:60.21:0,60,1021	0/0:3,0:3:6.02:0,6,102	0/0:18,0:18:42.14:0,42,685	0/0:12,0:12:30.10:0,30,492	0/0:15,0:15:39.13:0,39,650	0/0:16,0:16:42.12:0,42,663	0/0:18,0:18:54.18:0,54,919	0/0:38,0:38:93.32:0,93,1576	0/0:18,0:18:54.18:0,54,918	0/0:23,0:23:66.22:0,66,1100	0/0:21,0:21:54.18:0,54,919	0/0:9,0:9:27.09:0,27,459	0/0:11,0:11:33.11:0,33,537	1/1:1,13:14:39.13:507,39,0	0/0:19,0:19:54.18:0,54,905	0/0:11,0:11:24.07:0,24,382	0/0:23,0:23:60.21:0,60,1020	0/0:18,0:18:45.15:0,45,765	1/1:5,16:21:48.15:623,48,0	1/1:1,18:19:48.07:584,48,0	1/1:2,13:15:36.12:468,36,0	0/0:9,0:9:27.09:0,27,459	0/0:16,0:16:45.15:0,45,759	0/0:11,0:11:27.09:0,27,452	0/0:24,0:24:69.24:0,69,1174	0/0:21,0:21:63.19:0,63,1021	1/1:2,27:29:84.27:1091,84,0	0/0:8,0:8:24.08:0,24,381
chr10	47960079	.	C	CT	652.28	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.431;DP=476;FS=10.206;HRun=10;HaplotypeScore=74.7710;InbreedingCoeff=0.5838;MQ=63.04;MQ0=5;MQRankSum=-1.549;QD=18.64;ReadPosRankSum=1.003;VQSLOD=3.9679;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:27,8:35:59.58:747,60,0	0/0:11,0:11:26.95:0,27,221	0/0:20,0:9:0.82:0,1,45	0/0:16,0:6:4.14:0,4,84	0/0:26,0:28:69.38:0,69,518	0/0:15,1:16:12.96:0,13,313	0/0:13,0:13:35.66:0,36,275	0/0:32,0:32:52.09:0,52,485	0/0:7,0:7:8.99:0,9,74	0/0:17,0:17:32.83:0,33,260	0/0:19,0:19:35.90:0,36,290	0/0:11,0:11:11.96:0,12,95	0/0:11,0:11:14.97:0,15,122	0/0:15,0:15:41.94:0,42,344	0/0:11,0:11:14.95:0,15,120	0/0:15,0:13:26.75:0,27,209	0/0:19,0:20:20.42:0,20,211	0/0:8,0:8:5.99:0,6,49	0/0:18,0:19:29.86:0,30,232	0/0:18,0:18:53.92:0,54,440	0/0:7,0:7:17.97:0,18,147	0/0:10,0:10:17.79:0,18,137	0/0:19,0:19:33.27:0,33,256	0/0:16,0:16:32.93:0,33,265	0/0:14,0:14:17.77:0,18,147	0/0:18,0:18:20.50:0,20,275	0/0:27,0:27:56.88:0,57,468	0/0:23,0:22:35.95:0,36,295
chr10	47960094	.	TTC	T	2567.89	PASS	AB=0.821;AC=32;AF=0.571;AN=56;BaseQRankSum=11.178;DP=436;FS=10.907;HRun=0;HaplotypeScore=66.5142;InbreedingCoeff=0.7483;MQ=55.59;MQ0=9;MQRankSum=-0.016;QD=9.44;ReadPosRankSum=-0.231;VQSLOD=1.5585;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:28,4:31:31.14:347,31,0	0/0:9,0:9:24.06:0,24,372	1/1:13,0:4:5.52:40,6,0	0/0:15,0:5:3.93:0,4,51	1/1:26,1:27:64.39:404,64,0	0/0:17,0:17:51.14:0,51,785	0/0:12,0:12:32.28:0,32,453	0/0:25,0:23:43.48:0,43,703	1/1:3,3:6:3.01:45,3,0	1/1:13,2:15:38.66:283,39,0	1/1:15,2:17:32.79:240,33,0	1/1:11,0:11:11.19:50,11,0	1/1:8,0:8:5.60:25,6,0	0/0:19,0:19:51.10:0,51,779	0/0:7,0:7:21.05:0,21,320	0/1:15,0:13:51.88:55,0,52	1/1:17,1:18:32.82:182,33,0	1/1:0,8:8:3.01:45,3,0	0/0:13,0:11:30.07:0,30,401	0/0:18,0:18:54.08:0,54,784	0/0:7,0:7:20.99:0,21,310	1/1:9,0:9:17.64:92,18,0	0/1:8,10:18:14.24:207,0,14	1/1:18,0:18:34.04:182,34,0	1/1:17,0:17:19.53:88,20,0	1/1:18,1:19:23.24:280,23,0	0/0:22,0:22:57.10:0,57,826	1/1:19,2:20:33.95:216,34,0
chr10	47960095	.	TC	T	5483.12	PASS	AB=0.938;AC=35;AF=0.625;AN=56;BaseQRankSum=9.940;DP=426;FS=18.232;HRun=1;HaplotypeScore=49.4831;InbreedingCoeff=0.8299;MQ=55.39;MQ0=9;MQRankSum=-0.254;QD=19.37;ReadPosRankSum=-0.896;VQSLOD=3.4405;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:31,1:31:76.15:797,76,0	0/0:8,0:8:24.06:0,24,295	1/1:12,0:3:5.51:35,6,0	0/1:14,1:5:4.26:4,0,19	1/1:2,25:27:71.53:654,72,0	0/0:17,0:17:51.12:0,51,616	0/0:12,0:12:20.01:0,20,338	0/0:24,0:22:40.01:0,40,563	1/1:4,1:5:2.99:23,3,0	1/1:7,8:15:42.08:493,42,0	1/1:2,15:17:41.72:369,42,0	1/1:0,11:11:12.04:167,12,0	1/1:0,8:8:6.02:84,6,0	0/0:17,0:17:50.94:0,51,596	0/0:7,0:7:21.05:0,21,254	1/1:12,2:12:17.31:170,17,0	1/1:3,15:18:35.08:423,35,0	1/1:8,0:8:2.99:23,3,0	0/0:13,0:11:30.06:0,30,335	0/0:18,0:18:54.07:0,54,633	0/0:7,0:7:20.98:0,21,245	1/1:0,8:8:20.81:209,21,0	1/1:11,7:18:2.35:309,2,0	1/1:1,16:17:36.09:478,36,0	1/1:0,17:17:21.07:291,21,0	1/1:18,2:20:45.79:489,46,0	0/0:20,0:20:57.02:0,57,636	1/1:3,18:20:36.08:464,36,0
chr10	47960577	.	TA	T	506.62	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.837;DP=641;FS=0.000;HRun=2;HaplotypeScore=83.3763;InbreedingCoeff=0.9976;MQ=76.48;MQ0=0;MQRankSum=-1.407;QD=29.80;ReadPosRankSum=1.034;VQSLOD=3.1415;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,102,1566	0/0:14,0:14:42.14:0,42,671	0/0:15,0:15:39.13:0,39,618	0/0:21,0:21:23.51:0,24,737	0/0:28,0:28:84.29:0,84,1340	0/0:26,0:25:75.24:0,75,1170	0/0:18,0:18:54.18:0,54,860	0/0:30,0:30:84.29:0,84,1341	0/0:20,0:20:60.19:0,60,928	0/0:28,0:28:81.27:0,81,1272	0/0:22,0:22:66.21:0,66,1030	0/0:19,0:19:57.18:0,57,880	0/0:23,0:23:63.20:0,63,963	0/0:21,0:21:63.20:0,63,982	0/0:31,0:31:93.29:0,93,1423	1/1:0,17:17:45.10:601,45,0	0/0:18,0:18:54.16:0,54,838	0/0:15,0:15:45.15:0,45,719	0/0:20,0:20:60.20:0,60,935	0/0:22,0:22:66.20:0,66,999	0/0:21,0:21:63.18:0,63,960	0/0:28,0:28:78.23:0,78,1198	0/0:26,0:26:78.25:0,78,1212	0/0:21,0:21:63.20:0,63,980	0/0:17,0:17:51.17:0,51,815	0/0:33,0:33:99:0,99,1561	0/0:21,0:21:60.19:0,60,934	0/0:29,0:29:87.30:0,87,1386
chr10	47960733	.	C	CT	1285.84	PASS	AB=0.747;AC=11;AF=0.196;AN=56;BaseQRankSum=1.548;DP=526;FS=7.497;HRun=13;HaplotypeScore=70.4068;InbreedingCoeff=0.6810;MQ=66.66;MQ0=6;MQRankSum=0.790;QD=9.32;ReadPosRankSum=0.313;VQSLOD=2.5965;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:22:33.38:0,33,217	0/0:10,0:11:22.82:0,23,150	0/0:12,0:10:3.30:0,3,27	0/0:11,0:11:8.53:0,9,48	0/0:19,1:23:17.81:0,18,251	0/0:17,0:18:6.63:0,7,174	0/0:18,0:17:27.50:0,28,173	0/0:14,0:16:28.75:0,29,191	0/0:18,0:18:31.84:0,32,211	0/0:12,0:12:17.77:0,18,123	0/0:13,0:13:11.10:0,11,131	0/0:15,0:15:31.99:0,32,208	0/0:16,1:17:26.57:0,27,182	1/1:10,7:19:35.33:291,35,0	0/0:16,0:17:37.71:0,38,252	1/1:4,10:14:9.45:230,9,0	0/0:37,0:39:57.29:0,57,451	0/0:22,0:22:50.35:0,50,340	0/1:9,9:19:0.68:214,0,1	1/1:9,22:32:9.64:314,10,0	1/1:2,7:10:20.86:182,21,0	0/0:15,4:20:6.63:0,7,175	0/1:13,0:13:2.17:2,0,71	0/0:24,1:26:21.76:0,22,286	0/0:28,0:27:26.98:0,27,256	0/0:19,0:19:29.60:0,30,205	0/1:9,20:29:4.10:212,0,4	0/0:7,0:7:19.89:0,20,129
chr10	47960970	.	T	TCTC	998.73	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-6.836;DP=672;FS=20.500;HRun=0;HaplotypeScore=91.5213;InbreedingCoeff=0.9992;MQ=82.61;MQ0=0;MQRankSum=-1.357;QD=49.94;ReadPosRankSum=2.064;VQSLOD=3.8504;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:66.23:0,66,1125	0/0:13,0:13:39.12:0,39,641	0/0:25,0:25:66.23:0,66,1108	0/0:14,0:15:35.44:0,35,534	0/0:32,0:32:93.30:0,93,1557	0/0:31,0:31:90.29:0,90,1502	0/0:23,0:23:60.19:0,60,1023	0/0:37,0:37:99:0,102,1715	0/0:25,0:25:72.24:0,72,1199	0/0:27,0:27:75.25:0,75,1255	0/0:18,0:18:51.17:0,51,870	0/0:24,0:24:72.23:0,72,1199	0/0:19,0:19:57.20:0,57,969	0/0:15,0:15:45.15:0,45,767	0/0:33,0:33:96.30:0,96,1581	1/1:0,20:20:48.16:1094,48,0	0/0:24,0:24:72.25:0,72,1222	0/0:11,0:11:30.10:0,30,512	0/0:17,0:17:42.14:0,42,716	0/0:34,0:34:99:0,99,1688	0/0:28,0:28:81.28:0,81,1376	0/0:28,0:28:84.29:0,84,1415	0/0:32,0:32:93.32:0,93,1558	0/0:19,0:19:45.14:0,45,727	0/0:21,0:21:63.19:0,63,1021	0/0:30,0:30:90.30:0,90,1512	0/0:30,0:29:87.30:0,87,1464	0/0:18,0:18:51.17:0,51,869
chr10	47961929	.	G	GA	6535.63	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=-0.498;DP=388;FS=0.546;HRun=10;HaplotypeScore=53.2950;InbreedingCoeff=0.9446;MQ=62.91;MQ0=4;MQRankSum=0.357;QD=21.01;ReadPosRankSum=-0.496;VQSLOD=5.4050;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,3:27:51.37:274,51,0	0/0:2,0:2:5.99:0,6,49	0/0:11,0:7:17.93:0,18,140	0/0:10,0:7:11.94:0,12,94	1/1:2,7:9:20.85:193,21,0	0/0:13,0:13:32.94:0,33,268	0/0:16,0:13:38.96:0,39,320	1/1:7,15:21:45.58:480,46,0	1/1:4,9:13:21.01:211,21,0	1/1:1,10:11:30.08:320,30,0	1/1:1,10:11:27.07:288,27,0	1/1:2,11:13:27.07:288,27,0	1/1:2,7:10:20.92:205,21,0	1/1:2,12:13:24.06:256,24,0	0/0:12,0:12:26.93:0,27,216	0/0:13,0:13:32.91:0,33,271	1/1:6,28:35:53.39:754,53,0	1/1:3,14:17:39.10:415,39,0	1/1:2,12:14:36.07:371,36,0	1/1:4,7:11:26.81:267,27,0	1/1:3,6:9:9.02:96,9,0	1/1:2,8:9:24.06:254,24,0	1/1:5,5:10:22.23:213,22,0	1/1:3,10:14:32.92:334,33,0	1/1:4,11:14:8.44:295,8,0	1/1:5,18:23:54.13:574,54,0	1/1:4,11:15:24.06:255,24,0	1/1:0,6:6:18.05:192,18,0
chr10	47962121	.	T	TC	1835.19	PASS	AB=0.929;AC=15;AF=0.268;AN=56;BaseQRankSum=-1.748;DP=475;FS=6.053;HRun=1;HaplotypeScore=93.9168;InbreedingCoeff=0.8629;MQ=51.89;MQ0=9;MQRankSum=2.972;QD=12.23;ReadPosRankSum=0.912;VQSLOD=2.1629;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:42.23:0,42,278	0/0:5,0:5:14.17:0,14,100	0/0:43,0:15:21.05:0,21,248	0/0:45,0:20:16.49:0,16,178	1/1:9,16:25:11.78:282,12,0	0/0:12,0:12:34.10:0,34,284	0/0:19,0:19:41.69:0,42,335	0/0:33,0:33:61.86:0,62,449	0/0:10,0:10:25.09:0,25,158	1/1:19,0:18:41.22:375,41,0	1/1:13,1:14:26.47:249,26,0	0/0:15,0:15:30.94:0,31,193	0/0:13,0:12:26.88:0,27,148	0/0:8,0:8:20.85:0,21,160	0/0:10,0:10:20.68:0,21,157	0/0:9,0:9:14.85:0,15,111	1/1:17,0:14:23.70:218,24,0	1/1:19,0:16:8.38:166,8,0	0/0:19,0:18:44.54:0,45,324	0/0:16,0:16:39.92:0,40,246	0/0:4,0:4:11.96:0,12,96	0/0:6,0:6:13.77:0,14,71	0/0:15,0:15:29.20:0,29,135	0/0:9,0:9:17.30:0,17,119	1/1:21,0:19:11.36:128,11,0	1/1:22,0:22:55.91:482,56,0	0/0:13,0:13:32.21:0,32,228	0/1:12,1:13:28.45:129,0,28
chr10	47962768	.	TCAA	T	6948.84	PASS	AB=0.944;AC=46;AF=0.885;AN=52;BaseQRankSum=10.146;DP=711;FS=7.284;HRun=0;HaplotypeScore=120.1969;InbreedingCoeff=0.5934;MQ=65.60;MQ0=5;MQRankSum=-1.583;QD=11.30;ReadPosRankSum=3.170;VQSLOD=3.6717;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:24:11.90:84,12,0	0/1:12,1:13:15.05:15,0,363	./.	./.	1/1:11,11:23:24.04:295,24,0	0/0:20,0:20:33.10:0,33,584	0/1:23,1:24:5.99:6,0,499	1/1:28,0:28:2.37:8,2,0	1/1:12,9:21:21.05:260,21,0	1/1:23,12:35:39.09:478,39,0	1/1:13,6:19:15.05:196,15,0	1/1:3,16:19:45.15:587,45,0	1/1:19,19:38:63.20:822,63,0	1/1:16,0:29:29.56:200,30,0	0/0:25,0:25:12:0,12,777	1/1:10,14:24:38.96:509,39,0	1/1:15,18:33:45.15:587,45,0	1/1:15,10:25:22.31:310,22,0	1/1:22,0:30:17.86:125,18,0	1/1:13,0:28:32.14:206,32,0	1/1:19,0:19:0.47:1,0,0	1/1:14,8:22:18.06:228,18,0	1/1:11,7:18:14.79:196,15,0	1/1:22,11:33:33.11:430,33,0	1/1:15,12:26:27.09:352,27,0	1/1:18,11:30:36.06:430,36,0	1/1:19,0:36:38.69:272,39,0	1/1:8,8:16:27.09:352,27,0
chr10	47963131	.	GT	G	4501.54	PASS	AB=0.784;AC=29;AF=0.518;AN=56;BaseQRankSum=-6.407;DP=576;FS=9.043;HRun=13;HaplotypeScore=78.1828;InbreedingCoeff=0.7267;MQ=73.41;MQ0=3;MQRankSum=-1.543;QD=13.60;ReadPosRankSum=1.204;VQSLOD=4.9055;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:43:97.10:0,97,538	0/0:13,1:14:14.16:0,14,299	0/1:24,0:16:3.98:4,0,108	0/0:18,0:14:6.47:0,6,54	1/1:14,16:30:59.12:427,59,0	0/0:15,0:14:29.93:0,30,342	0/0:9,0:9:0.05:0,0,154	1/1:7,18:27:1.87:302,2,0	1/1:3,10:14:34.53:236,35,0	1/1:12,14:26:28.92:351,29,0	1/1:8,8:18:48.68:329,49,0	1/1:7,7:14:31.84:215,32,0	1/1:7,9:16:35.59:254,36,0	0/0:2,0:14:22.81:0,23,118	0/0:13,0:13:9.09:0,9,216	0/0:15,0:15:22.29:0,22,156	0/1:7,4:11:26.42:123,0,26	1/1:6,10:16:35.73:259,36,0	0/0:3,0:15:34.33:0,34,182	0/0:5,0:33:60.07:0,60,309	0/0:5,0:21:22.73:0,23,114	1/1:8,11:19:44.27:315,44,0	1/1:5,15:20:47.65:346,48,0	0/1:8,13:21:7.79:266,0,8	1/1:3,21:25:24.95:311,25,0	1/1:7,19:26:39.80:418,40,0	0/0:12,0:33:34.33:0,34,185	1/1:6,17:24:26.50:347,27,0
chr10	47963208	.	TA	T	6593.83	PASS	AB=0.917;AC=31;AF=0.554;AN=56;BaseQRankSum=9.572;DP=507;FS=1.611;HRun=9;HaplotypeScore=60.1258;InbreedingCoeff=0.9094;MQ=73.29;MQ0=1;MQRankSum=0.734;QD=21.98;ReadPosRankSum=2.389;VQSLOD=5.7386;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,35:39:96.04:879,96,0	0/0:11,0:11:27.07:0,27,302	0/0:8,0:8:15.03:0,15,158	0/1:10,1:11:28.95:29,0,133	1/1:6,14:20:42.02:384,42,0	0/0:18,0:18:51.15:0,51,588	0/0:26,1:27:38.73:0,39,698	0/0:21,0:21:57.11:0,57,622	1/1:0,12:12:36.02:329,36,0	1/1:3,26:29:81:733,81,0	1/1:4,12:16:39.01:355,39,0	1/1:2,20:22:57.03:522,57,0	1/1:1,14:15:42.02:384,42,0	0/0:10,0:10:27.03:0,27,296	0/0:10,0:10:27.08:0,27,309	0/0:16,0:16:42.12:0,42,485	1/1:1,22:23:63.03:577,63,0	1/1:2,13:15:39.02:357,39,0	0/0:18,0:18:42.12:0,42,485	0/0:17,0:17:30.09:0,30,345	0/0:29,0:28:78.23:0,78,900	1/1:1,17:18:44.90:411,45,0	1/1:1,14:15:35.84:329,36,0	1/1:5,21:26:56.57:513,57,0	1/1:7,10:17:30.01:274,30,0	1/1:4,16:20:51.02:463,51,0	0/0:21,1:22:17.67:0,18,457	1/1:0,2:2:6:55,6,0
chr10	47963392	.	CACAG	C	2689.34	PASS	AB=0.971;AC=32;AF=0.615;AN=52;BaseQRankSum=-3.779;DP=531;FS=31.846;HRun=0;HaplotypeScore=108.0076;InbreedingCoeff=-0.1646;MQ=43.54;MQ0=69;MQRankSum=1.658;QD=5.77;ReadPosRankSum=-0.594;VQSLOD=0.5786;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:38,0:30:21.41:295,21,0	0/1:12,0:10:11.89:12,0,39	./.	./.	0/1:8,18:24:7.03:12,0,7	0/0:29,0:23:9.73:0,10,223	0/0:19,0:15:8.99:0,9,75	0/0:17,0:14:2.92:0,3,17	0/1:15,0:14:41.48:41,0,56	1/1:30,0:29:50.74:417,51,0	1/1:15,0:12:5.84:38,6,0	0/1:20,0:18:5.32:162,0,5	0/1:11,0:10:26.95:56,0,27	0/1:10,0:8:29.51:56,0,30	0/1:21,0:21:26.01:26,0,161	1/1:9,0:9:14.72:112,15,0	1/1:25,0:22:41.15:316,41,0	1/1:21,0:17:19.74:209,20,0	0/1:23,0:19:72.30:72,0,154	0/1:11,0:11:19.52:57,0,20	0/1:46,0:33:99:171,0,135	0/1:18,0:15:69.36:69,0,79	0/1:16,0:15:16.41:148,0,16	0/1:25,0:22:48.59:81,0,49	1/1:21,0:20:5.83:36,6,0	1/1:22,0:19:30.38:251,30,0	0/1:14,0:11:6.13:6,0,70	1/1:17,0:13:26.36:205,26,0
chr10	47963394	.	CAG	C	2445.56	PASS	AB=0.917;AC=41;AF=0.788;AN=52;BaseQRankSum=1.841;DP=537;FS=0.000;HRun=0;HaplotypeScore=99.1334;InbreedingCoeff=0.5080;MQ=43.60;MQ0=67;MQRankSum=2.404;QD=5.29;ReadPosRankSum=0.078;VQSLOD=2.7247;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:41,0:33:9.38:204,9,0	0/0:11,0:10:6.42:0,6,49	./.	./.	1/1:26,0:24:2.94:18,3,0	0/0:28,0:22:17.33:0,17,139	0/0:18,0:14:3:0,3,25	0/0:17,0:14:2.92:0,3,17	1/1:15,0:14:8.88:62,9,0	1/1:30,0:29:29.89:257,30,0	0/1:10,5:12:0:0,0,0	1/1:20,0:18:26.81:192,27,0	1/1:11,1:11:14.79:100,15,0	1/1:10,0:8:6.75:68,7,0	0/1:21,0:21:0.83:1,0,150	1/1:9,0:9:8.97:72,9,0	1/1:24,0:22:32.30:250,32,0	1/1:23,0:18:10.80:142,11,0	1/1:23,0:19:0.01:90,0,0	1/1:12,0:12:14.93:115,15,0	1/1:46,0:34:25.73:235,26,0	1/1:18,0:15:17.84:127,18,0	1/1:17,0:16:29.62:205,30,0	1/1:25,0:22:14.20:105,14,0	1/1:14,8:21:2.90:16,3,0	1/1:21,0:18:21.84:206,22,0	0/1:15,0:12:15.98:35,0,16	1/1:17,0:13:11.92:90,12,0
chr10	47963447	.	AAGAGAATG	A	606.04	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.978;DP=454;FS=2.828;HRun=0;HaplotypeScore=136.9987;InbreedingCoeff=0.9535;MQ=75.01;MQ0=3;MQRankSum=-4.150;QD=60.60;ReadPosRankSum=-3.040;VQSLOD=2.7887;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:48.16:0,48,1825	0/0:5,0:5:15.05:0,15,641	0/0:30,0:22:35.05:0,35,961	0/0:41,0:22:48.12:0,48,1490	0/0:20,0:20:54.19:0,54,2258	0/0:15,0:15:39.13:0,39,1531	0/0:13,0:13:36.11:0,36,1436	0/0:26,0:24:69.20:0,69,2767	0/0:11,0:11:15.05:0,15,581	0/0:17,0:17:42.14:0,42,1591	0/0:10,0:10:27.09:0,27,1031	0/0:18,0:18:36.12:0,36,1330	0/0:15,0:15:39.12:0,39,1549	0/0:11,0:11:27.09:0,27,987	0/0:16,0:16:45.14:0,45,1761	1/1:1,9:10:27.09:700,27,0	0/0:22,0:22:54.17:0,54,1951	0/0:10,0:10:21.07:0,21,859	0/0:16,0:16:42.13:0,42,1347	0/0:11,0:11:30.10:0,30,1033	0/0:23,0:23:54.02:0,54,2001	0/0:12,0:12:33.11:0,33,1248	0/0:15,0:15:39.09:0,39,1431	0/0:17,0:16:39.56:0,40,1508	0/0:9,0:9:18.06:0,18,771	0/0:13,0:13:36.12:0,36,1465	0/0:12,0:12:36.12:0,36,1423	0/0:14,0:14:33.11:0,33,1405
chr10	47963495	.	T	TAA	4014.65	PASS	AB=0.566;AC=30;AF=0.536;AN=56;BaseQRankSum=0.795;DP=532;FS=2.116;HRun=14;HaplotypeScore=97.2675;InbreedingCoeff=0.7986;MQ=64.16;MQ0=2;MQRankSum=1.322;QD=13.16;ReadPosRankSum=-3.108;VQSLOD=2.2338;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,16:20:12.04:156,12,0	0/0:15,0:16:29.47:0,29,237	0/0:21,0:15:0.83:0,1,8	0/0:11,0:9:5.72:0,6,85	1/1:5,11:21:28.66:268,29,0	0/0:17,0:20:9:0,9,201	0/0:12,0:14:14.44:0,14,154	0/0:26,0:28:22.68:0,23,369	1/1:3,12:17:17.20:204,17,0	1/1:10,14:29:41.39:435,41,0	0/1:5,11:19:20.38:168,0,20	1/1:8,12:22:19.24:158,19,0	1/1:7,14:22:17.92:196,18,0	0/0:15,0:15:20.55:0,21,175	0/0:25,0:25:47.63:0,48,401	1/1:5,1:13:27.05:284,27,0	1/1:6,9:18:16.69:134,17,0	0/1:2,6:10:7.05:167,0,7	0/0:23,0:27:31.11:0,31,376	0/0:15,0:17:26.44:0,26,206	0/0:18,0:18:17.90:0,18,192	1/1:16,5:21:36.55:324,37,0	1/1:6,9:19:19.78:203,20,0	1/1:14,0:14:21:212,21,0	1/1:10,3:14:25.17:237,25,0	1/1:5,12:21:39.59:397,40,0	0/0:14,0:14:26.83:0,27,226	1/1:5,19:25:36.12:472,36,0
chr10	47964561	.	C	CT	2797	PASS	AB=0.977;AC=32;AF=0.571;AN=56;BaseQRankSum=2.334;DP=372;FS=3.218;HRun=10;HaplotypeScore=83.7305;InbreedingCoeff=0.6854;MQ=69.15;MQ0=6;MQRankSum=-4.683;QD=11.95;ReadPosRankSum=-0.942;VQSLOD=3.3703;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,12:18:36.36:349,36,0	0/0:3,0:3:8.99:0,9,74	0/0:46,0:25:17.27:0,17,163	0/1:34,0:16:11.18:11,0,87	1/1:13,9:23:20.02:362,20,0	0/0:10,0:10:14.90:0,15,116	0/0:5,0:5:14.98:0,15,123	0/1:20,1:21:48.11:48,0,150	1/1:2,2:4:6.01:59,6,0	1/1:8,11:17:16.60:346,17,0	1/1:1,8:9:2.41:208,2,0	1/1:4,3:7:10.27:96,10,0	1/1:11,1:10:11.43:85,11,0	0/0:5,0:4:9.93:0,10,49	0/0:13,0:13:23.79:0,24,227	0/0:6,0:6:6.66:0,7,21	1/1:6,7:13:26.18:239,26,0	1/1:9,7:15:24.91:244,25,0	0/0:22,0:21:45.90:0,46,348	0/0:7,0:7:16.43:0,16,113	0/0:11,0:11:5.99:0,6,49	1/1:0,1:1:3.01:32,3,0	1/1:2,7:9:25.09:234,25,0	1/1:2,5:7:12.02:115,12,0	1/1:13,6:19:37.12:327,37,0	1/1:12,4:13:26.42:215,26,0	0/0:10,0:10:5.11:0,5,100	1/1:2,1:3:3.01:30,3,0
chr10	47964572	.	C	CTTTTTCTTTT	8214.18	PASS	AB=1.000;AC=43;AF=0.768;AN=56;BaseQRankSum=2.397;DP=371;FS=4.518;HRun=0;HaplotypeScore=100.4118;InbreedingCoeff=0.7396;MQ=59.97;MQ0=6;MQRankSum=-5.607;QD=29.98;ReadPosRankSum=-0.574;VQSLOD=4.2021;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:22,2:22:18.53:580,19,0	0/0:4,0:4:6.02:0,6,179	0/0:34,0:14:6.47:0,6,175	0/0:29,0:13:17.40:0,17,268	1/1:20,3:23:36.06:751,36,0	0/0:8,0:8:15.05:0,15,400	0/0:7,0:7:14.99:0,15,391	1/1:21,0:19:12.88:177,13,0	1/1:5,1:6:9.03:330,9,0	1/1:17,2:17:15.05:460,15,0	1/1:6,3:9:9.03:443,9,0	1/1:7,1:8:6.02:186,6,0	1/1:10,0:8:9.03:128,9,0	1/1:3,3:5:9.03:449,9,0	0/0:13,0:13:33.08:0,33,884	1/1:0,5:6:9.03:453,9,0	1/1:9,4:13:18.06:559,18,0	1/1:18,1:18:12.51:476,13,0	1/1:14,5:18:15.05:565,15,0	1/1:4,6:14:15.02:401,15,0	1/1:2,5:8:3.01:150,3,0	0/1:2,0:2:0:0,0,0	1/1:9,2:11:15.05:408,15,0	1/1:5,3:7:9.03:444,9,0	1/1:18,3:21:27.07:661,27,0	1/1:13,1:12:18.53:383,19,0	1/1:10,0:10:6.01:63,6,0	1/1:2,1:3:3.01:148,3,0
chr10	47964578	.	C	CTTTTTTTTTT	12658.83	PASS	AB=0.982;AC=37;AF=0.661;AN=56;BaseQRankSum=5.953;DP=343;FS=0.652;HRun=7;HaplotypeScore=109.4236;InbreedingCoeff=0.3808;MQ=50.96;MQ0=8;MQRankSum=-7.576;QD=48.88;ReadPosRankSum=2.947;VQSLOD=1.1931;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:22,1:21:29.98:846,30,0	0/0:5,0:5:8.93:0,9,188	0/0:26,0:9:6.30:0,6,156	0/0:21,0:10:17.98:0,18,275	1/1:23,0:22:48.66:988,49,0	0/0:8,0:8:15.04:0,15,397	0/0:9,0:8:16.01:0,16,406	1/1:21,0:18:8.18:677,8,0	1/1:4,1:5:8.99:299,9,0	1/1:18,0:16:42.08:1324,42,0	0/1:9,0:9:3.41:588,0,3	0/1:9,0:9:30.96:290,0,31	0/1:12,0:10:6.97:238,0,7	1/1:5,1:5:12.04:550,12,0	0/0:14,0:14:36:0,36,887	1/1:6,0:6:9.03:400,9,0	0/1:12,1:13:13.62:707,0,14	0/1:16,1:16:40.87:452,0,41	1/1:15,0:14:27.09:1097,27,0	0/1:13,0:13:2.69:545,0,3	1/1:2,0:2:3.01:133,3,0	0/1:6,0:6:39.95:121,0,40	1/1:9,0:9:10.18:670,10,0	1/1:7,0:6:15.05:645,15,0	1/1:18,0:18:11.94:774,12,0	1/1:14,0:12:30.42:675,30,0	1/1:10,0:10:17.99:499,18,0	1/1:3,0:3:3.01:143,3,0
chr10	47965149	.	G	GA	1677.72	PASS	AB=0.804;AC=18;AF=0.321;AN=56;BaseQRankSum=-5.012;DP=556;FS=4.114;HRun=15;HaplotypeScore=68.2579;InbreedingCoeff=0.6048;MQ=61.74;MQ0=14;MQRankSum=-0.415;QD=7.02;ReadPosRankSum=-0.639;VQSLOD=2.5861;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,18:25:24.83:312,25,0	0/0:12,0:15:21.17:0,21,133	0/0:16,0:6:8.65:0,9,50	0/0:16,0:3:5.84:0,6,35	1/1:23,4:30:2.14:159,2,0	0/0:17,0:24:52.43:0,52,274	0/0:17,0:18:31.33:0,31,184	0/0:22,0:24:51.05:0,51,295	0/0:16,0:18:27.28:0,27,154	1/1:10,14:24:14.95:233,15,0	1/1:8,15:23:25.22:304,25,0	0/0:13,0:13:29.31:0,29,179	0/0:17,1:20:12.02:0,12,177	0/0:12,0:13:25.37:0,25,148	0/0:16,1:21:6.25:0,6,124	0/0:20,0:24:44.21:0,44,251	1/1:7,16:23:12.68:200,13,0	1/1:3,10:13:14.90:126,15,0	0/0:11,1:13:0.36:0,0,105	0/0:23,2:26:8.89:0,9,160	0/0:15,0:16:23.38:0,23,133	0/0:16,1:19:10.75:0,11,131	0/1:22,1:25:3.19:3,0,166	0/0:18,1:21:19.98:0,20,220	0/1:4,4:9:33.07:69,0,33	1/1:13,12:27:27.64:313,28,0	0/1:22,2:25:38.36:38,0,129	0/1:7,6:13:0.03:108,0,0
chr10	47965674	.	AT	A	1655.02	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=10.240;DP=487;FS=13.370;HRun=9;HaplotypeScore=48.2378;InbreedingCoeff=0.9643;MQ=72.95;MQ0=1;MQRankSum=-0.414;QD=18.39;ReadPosRankSum=1.413;VQSLOD=2.5045;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:57.16:0,57,648	0/0:6,0:6:15.04:0,15,173	0/0:16,0:14:23.79:0,24,226	0/0:9,0:8:9.02:0,9,99	0/0:22,0:22:66.17:0,66,743	0/0:21,0:21:60.16:0,60,674	0/0:7,0:7:18.05:0,18,205	0/0:32,1:33:78.23:0,78,894	0/0:13,0:13:33.10:0,33,381	0/0:27,0:27:69.20:0,69,794	0/0:29,0:29:87.23:0,87,983	0/0:21,0:21:57.15:0,57,647	0/0:11,0:11:33.10:0,33,381	1/1:5,13:18:33.01:302,33,0	0/0:11,0:11:27.08:0,27,312	0/0:11,0:11:33.10:0,33,381	0/0:30,0:30:81.24:0,81,935	0/0:22,0:22:63.17:0,63,714	1/1:3,13:16:39.02:357,39,0	1/1:2,13:15:38.96:347,39,0	1/1:3,7:10:18:165,18,0	0/0:9,0:9:27.08:0,27,312	0/0:18,1:19:23.66:0,24,506	0/0:5,0:5:9.03:0,9,104	0/0:24,0:24:69.19:0,69,787	0/0:18,0:18:48.12:0,48,537	1/1:2,29:31:72.03:659,72,0	0/0:12,0:12:33.07:0,33,360
chr10	47967043	.	A	ATG	10825.55	PASS	AB=0.609;AC=23;AF=0.411;AN=56;BaseQRankSum=-15.784;DP=904;FS=8.086;HRun=0;HaplotypeScore=121.8192;InbreedingCoeff=0.4561;MQ=57.41;MQ0=32;MQRankSum=4.381;QD=23.53;ReadPosRankSum=1.683;VQSLOD=5.6957;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,31:49:41.99:953,42,0	0/0:5,0:5:12.04:0,12,139	0/0:66,0:22:19.25:0,19,185	0/0:78,0:27:8.76:0,9,82	1/1:8,14:22:33.11:512,33,0	0/0:28,0:29:63.02:0,63,707	0/0:31,0:35:12.22:0,12,511	0/0:14,0:25:22.13:0,22,121	0/1:10,20:30:17.50:734,0,18	0/1:17,23:38:25.17:944,0,25	1/1:3,7:10:12.04:187,12,0	1/1:11,31:43:40.59:1085,41,0	1/1:8,19:30:29.06:893,29,0	0/0:23,0:23:45.45:0,45,223	0/0:19,0:22:41.60:0,42,410	0/0:9,0:27:42.61:0,43,210	0/1:12,30:41:18.70:1030,0,19	1/1:8,18:27:22.99:755,23,0	0/0:25,0:25:26:0,26,127	0/0:26,0:26:26.62:0,27,215	0/0:60,0:59:99:0,99,488	1/1:7,15:22:42.14:652,42,0	0/1:3,12:15:33.21:431,0,33	0/1:19,31:49:22.67:1038,0,23	0/1:11,18:29:21.17:605,0,21	0/1:19,20:40:31.78:866,0,32	0/0:23,0:23:39.77:0,40,195	1/1:3,5:8:9.03:140,9,0
chr10	47967068	.	TGG	T	4612.09	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=-0.979;DP=845;FS=0.000;HRun=2;HaplotypeScore=135.3457;InbreedingCoeff=0.8357;MQ=65.47;MQ0=17;MQRankSum=0.852;QD=24.80;ReadPosRankSum=1.829;VQSLOD=3.6374;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:45:77.61:0,78,1030	0/0:7,0:7:21.04:0,21,313	0/0:54,0:27:60.42:0,60,788	0/0:63,0:30:39.13:0,39,692	0/0:23,0:23:64.08:0,64,593	0/0:28,0:28:72.81:0,73,1334	0/0:33,0:33:75.09:0,75,1275	0/0:23,0:23:2.09:0,2,265	0/0:30,0:30:77.86:0,78,898	0/0:34,0:32:95.20:0,95,1159	0/0:10,0:10:18.01:0,18,191	0/0:42,0:42:92.17:0,92,1079	0/0:30,0:30:78.15:0,78,922	1/1:0,26:26:51.13:799,51,0	0/0:22,0:22:18.04:0,18,793	0/1:28,0:28:70.40:70,0,198	0/0:40,0:39:99:0,102,1256	0/0:29,0:29:51.28:0,51,732	1/1:0,19:19:57.03:698,57,0	1/1:2,20:22:17.57:719,18,0	1/1:4,62:66:99:1644,105,0	0/0:18,0:18:49.94:0,50,597	0/0:17,0:17:45.10:0,45,568	0/0:48,0:47:99:0,120,1546	0/0:22,0:22:54.14:0,54,696	0/0:32,0:32:96.23:0,96,1229	1/1:1,24:25:41.74:681,42,0	0/0:8,0:7:12.03:0,12,140
chr10	47970202	.	C	CA	674.04	PASS	AB=0.975;AC=9;AF=0.161;AN=56;BaseQRankSum=-0.290;DP=577;FS=0.701;HRun=10;HaplotypeScore=63.9101;InbreedingCoeff=0.6031;MQ=58.89;MQ0=12;MQRankSum=-0.864;QD=3.64;ReadPosRankSum=-2.333;VQSLOD=-0.7471;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,13:25:32.84:313,33,0	0/0:6,0:6:14.95:0,15,119	0/1:55,1:17:30.34:30,0,86	0/1:58,0:17:7.64:8,0,44	0/0:16,0:14:20.91:0,21,166	0/1:15,1:16:1.99:2,0,191	0/0:21,0:21:32.95:0,33,270	1/1:8,14:19:20.47:423,20,0	0/0:6,0:5:8.98:0,9,74	0/0:21,0:21:41.92:0,42,343	0/0:17,0:16:28.87:0,29,218	0/0:12,0:11:23:0,23,178	0/0:14,0:16:37.88:0,38,286	0/0:16,0:14:26.75:0,27,221	0/0:27,0:24:41.89:0,42,338	1/1:7,0:7:10.83:46,11,0	0/0:25,0:23:11.94:0,12,98	0/0:13,0:13:20.78:0,21,165	0/0:26,0:24:61.74:0,62,479	0/0:21,0:21:55.96:0,56,449	0/0:16,0:15:23.93:0,24,194	0/0:8,0:8:14.96:0,15,123	0/0:15,0:15:26.64:0,27,215	0/0:20,0:19:23.95:0,24,195	0/0:19,1:18:38.92:0,39,317	0/0:32,0:30:71.30:0,71,590	0/0:25,0:23:38.69:0,39,314	0/0:7,0:7:8.97:0,9,74
chr10	47970204	.	A	AAC	117.63	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=3.168;DP=575;FS=0.000;HRun=0;HaplotypeScore=73.5148;InbreedingCoeff=0.6489;MQ=60.03;MQ0=10;MQRankSum=-0.980;QD=3.68;ReadPosRankSum=0.363;VQSLOD=1.8617;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:24:2.44:2,0,160	0/0:6,0:6:18.02:0,18,246	0/0:54,0:19:9.66:0,10,364	0/0:57,0:17:18.13:0,18,199	0/0:16,0:14:27.04:0,27,361	0/0:16,0:16:32.55:0,33,436	0/0:22,0:21:39.55:0,40,549	0/0:20,0:19:51.23:0,51,281	0/0:6,0:5:12:0,12,155	0/0:20,0:20:51.09:0,51,707	0/0:19,0:16:33.06:0,33,454	0/0:13,0:11:27.07:0,27,369	0/0:16,0:16:48.03:0,48,616	0/0:17,0:15:36.03:0,36,476	0/0:27,0:24:51.07:0,51,694	1/1:0,7:8:12.04:203,12,0	0/0:25,0:23:20.94:0,21,243	0/0:13,0:13:24.07:0,24,344	0/0:27,0:25:69.17:0,69,974	0/0:22,0:21:63.18:0,63,899	0/0:16,0:14:30.05:0,30,412	0/0:8,0:8:21.05:0,21,281	0/0:16,0:16:36.09:0,36,485	0/0:23,0:22:30.08:0,30,418	0/0:20,0:18:42.10:0,42,610	0/0:32,0:31:87.15:0,87,1209	0/0:25,0:23:58.65:0,59,707	0/0:7,0:7:15.03:0,15,189
chr10	47972724	.	A	ACTCATACATGAAGAGAGAATG	18459.57	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-6.200;DP=749;FS=2.035;HRun=0;HaplotypeScore=288.5836;InbreedingCoeff=0.9019;MQ=78.17;MQ0=3;MQRankSum=-11.519;QD=43.23;ReadPosRankSum=-3.273;VQSLOD=3.2156;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,19:36:6.02:562,6,0	0/0:11,0:11:9.02:0,9,360	0/0:24,0:24:33.04:0,33,632	0/0:26,0:26:27:0,27,529	1/1:8,15:35:6.02:168,6,0	0/0:22,0:22:45.11:0,45,1797	0/0:17,0:17:30.07:0,30,1136	0/0:42,0:42:72.13:0,72,1454	1/1:3,20:39:15.05:1461,15,0	1/1:12,12:43:91.45:4297,91,0	1/1:35,0:35:25.31:621,25,0	1/1:2,17:32:15.05:1463,15,0	1/1:6,15:25:11.67:1005,12,0	0/0:19,0:19:42.14:0,42,2209	0/0:18,0:18:42.14:0,42,1981	0/0:31,0:31:63.17:0,63,2746	1/1:21,0:21:23.97:1372,24,0	1/1:3,3:10:3.01:293,3,0	0/0:29,0:29:48.16:0,48,2485	0/0:28,0:28:57.18:0,57,2250	0/0:21,0:21:39.11:0,39,1505	1/1:11,9:26:12.04:603,12,0	1/1:8,9:24:6.02:244,6,0	1/1:10,8:21:12.04:740,12,0	1/1:8,14:30:12.04:1171,12,0	1/1:13,17:38:55.20:3847,55,0	0/0:34,0:34:66.21:0,66,3208	1/1:9,0:9:18:614,18,0
chr10	47974069	.	CCT	C	8721.11	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=15.688;DP=807;FS=0.994;HRun=0;HaplotypeScore=87.6188;InbreedingCoeff=0.9868;MQ=54.75;MQ0=28;MQRankSum=1.415;QD=41.73;ReadPosRankSum=0.743;VQSLOD=6.5351;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,117,2296	0/0:9,0:9:27.09:0,27,547	0/0:24,0:4:12.04:0,12,217	0/0:37,0:5:12.02:0,12,172	1/1:0,23:22:51.17:826,51,0	0/0:27,0:27:72.25:0,72,1463	0/0:22,0:20:54.19:0,54,1078	0/0:33,0:31:96.31:0,96,1857	0/0:29,0:29:87.30:0,87,1757	1/1:0,34:34:99:1588,99,0	1/1:0,12:12:30.10:484,30,0	0/0:34,0:34:99:0,102,2036	0/0:40,0:40:99:0,117,2323	0/0:24,0:24:72.23:0,72,1426	0/0:20,0:20:60.21:0,60,1219	0/0:25,0:25:62.94:0,63,1184	1/1:1,41:41:99:1809,111,0	1/1:7,39:40:74.03:1723,74,0	0/0:27,0:23:66.18:0,66,1234	0/0:22,0:22:66.23:0,66,1310	0/0:57,0:56:99:0,160,3166	0/0:25,0:25:72.25:0,72,1437	0/0:22,0:22:66.23:0,66,1319	0/0:46,0:45:99:0,135,2684	1/1:0,14:14:36.12:587,36,0	1/1:0,31:31:90.31:1460,90,0	0/0:35,0:35:99:0,102,2033	1/1:0,7:7:15.05:244,15,0
chr10	47974750	.	A	AAAAAC	3067.85	PASS	AB=1.000;AC=15;AF=0.278;AN=54;BaseQRankSum=-8.487;DP=627;FS=0.643;HRun=0;HaplotypeScore=115.9900;InbreedingCoeff=0.9013;MQ=68.04;MQ0=2;MQRankSum=0.258;QD=18.59;ReadPosRankSum=0.036;VQSLOD=3.4224;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:45.11:0,45,718	0/0:12,0:12:27.08:0,27,435	0/1:24,0:18:0:0,0,0	./.	0/0:22,0:22:27.08:0,27,435	0/0:31,0:31:63.15:0,63,975	0/0:21,0:21:21.06:0,21,342	0/0:37,0:35:0:0,0,0	1/1:4,15:19:21.07:579,21,0	0/0:30,0:30:39.11:0,39,582	0/0:25,0:25:24.07:0,24,388	1/1:10,6:16:6.02:165,6,0	1/1:11,9:20:24.08:655,24,0	0/0:17,0:17:24.01:0,24,333	0/0:26,0:26:39.13:0,39,686	1/1:10,9:20:15.05:414,15,0	0/0:27,0:28:17.89:0,18,316	0/0:17,0:17:26.92:0,27,375	0/0:21,0:21:18.05:0,18,292	0/0:20,0:20:18.06:0,18,317	0/0:23,0:23:21.07:0,21,361	1/1:11,6:18:12.04:304,12,0	1/1:13,15:28:27.56:746,28,0	1/1:14,6:20:15.05:388,15,0	0/0:16,0:16:33.11:0,33,578	0/0:38,0:38:54.16:0,54,854	0/0:18,0:18:39.12:0,39,658	0/0:8,0:8:18.03:0,18,261
chr10	47975407	.	T	TACAC	3179.55	PASS	AB=0.795;AC=30;AF=0.577;AN=52;BaseQRankSum=-6.253;DP=492;FS=16.127;HRun=0;HaplotypeScore=134.9942;InbreedingCoeff=0.4310;MQ=64.79;MQ0=6;MQRankSum=5.857;QD=9.41;ReadPosRankSum=-2.373;VQSLOD=1.7076;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:23,1:23:10.93:209,11,0	0/0:7,0:7:9.47:0,9,122	1/1:25,0:18:0.47:1,0,0	./.	1/1:22,13:36:21:449,21,0	0/0:20,0:20:17.99:0,18,250	0/0:10,0:10:6.02:0,6,94	1/1:25,0:23:10.24:54,10,0	0/1:7,0:15:27.25:54,0,27	1/1:14,0:14:8.89:64,9,0	1/1:12,2:17:6.02:102,6,0	0/1:7,0:13:25.29:25,0,36	0/1:9,0:13:71.36:88,0,71	0/0:6,0:12:21.02:0,21,195	0/0:12,0:12:15.05:0,15,234	0/1:13,0:13:23.79:130,0,24	1/1:10,7:16:21.07:454,21,0	0/1:9,7:16:31.74:265,0,32	0/0:8,0:18:18.02:0,18,167	0/0:9,0:25:33.04:0,33,307	./.	1/1:8,1:21:13.06:112,13,0	1/1:9,0:18:13.52:61,14,0	0/1:10,0:10:18.55:19,0,38	1/1:9,13:21:15.05:354,15,0	1/1:14,6:25:32.76:500,33,0	0/0:8,0:23:36.37:0,36,383	1/1:6,6:12:18.53:426,19,0
chr10	47975424	.	A	ACACACGCACGCACGCACG	783.98	PASS	AB=0.788;AC=2;AF=0.036;AN=56;BaseQRankSum=1.066;DP=521;FS=1.277;HRun=0;HaplotypeScore=275.2045;InbreedingCoeff=-0.0467;MQ=53.15;MQ0=12;MQRankSum=-3.794;QD=16.68;ReadPosRankSum=1.196;VQSLOD=1.9528;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:32,0:28:91.28:91,0,416	0/0:9,0:8:15.05:0,15,637	0/0:28,0:13:27.09:0,27,510	0/0:25,0:10:9.15:0,9,310	0/0:40,0:39:59.01:0,59,1069	0/0:16,0:16:45.11:0,45,1394	0/0:15,0:15:39.09:0,39,976	0/0:24,0:21:57.18:0,57,1289	0/0:14,0:14:33.57:0,34,1002	0/0:14,0:14:36.04:0,36,924	0/0:11,0:11:24.07:0,24,481	0/0:13,0:13:21.07:0,21,715	0/0:16,0:15:36.11:0,36,1086	0/0:15,0:14:27.43:0,27,922	0/0:14,0:14:28.32:0,28,1041	0/1:4,6:15:99:781,0,118	0/0:19,0:18:4.57:0,5,575	0/0:18,0:18:33.01:0,33,729	0/0:14,0:14:29.22:0,29,1174	0/0:26,0:26:59.12:0,59,1592	0/0:7,0:7:10.72:0,11,262	0/0:25,0:25:36.10:0,36,984	0/0:23,0:23:45.59:0,46,1171	0/0:13,0:13:27.50:0,28,808	0/0:20,0:19:30.09:0,30,646	0/0:21,0:21:60.18:0,60,1342	0/0:22,0:22:28.38:0,28,1933	0/0:12,0:12:32.84:0,33,779
chr10	47975841	.	ATGTGTTCCTTTTGTTTTTGTTATTTAAAGGAAGATGTGGTT	A	1365.34	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.800;DP=669;FS=1.720;HRun=0;HaplotypeScore=635.2455;InbreedingCoeff=0.9760;MQ=78.63;MQ0=0;MQRankSum=-4.125;QD=113.78;ReadPosRankSum=1.034;VQSLOD=-0.2033;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,6:12:15.05:1454,15,0	0/0:6,0:6:18.06:0,18,2943	0/0:25,0:24:60.21:0,60,4132	0/0:18,0:18:47.75:0,48,3152	0/0:41,0:41:99:0,108,15945	0/0:35,0:35:99:0,105,15537	0/0:18,0:18:42.14:0,42,5031	0/0:28,0:28:57.19:0,57,4634	0/0:20,0:20:51.17:0,51,8099	0/0:29,0:29:81.28:0,81,11042	0/0:23,0:23:66.23:0,66,9931	0/0:20,0:20:57.20:0,57,6864	0/0:27,0:27:81.28:0,81,11195	0/0:24,0:24:72.25:0,72,11632	0/0:26,0:26:78.27:0,78,12345	0/0:23,0:23:66.21:0,66,9474	0/0:17,0:17:44.53:0,45,6481	0/0:19,0:19:51.18:0,51,7530	0/0:32,0:32:87.30:0,87,7157	0/0:26,0:26:72.25:0,72,10308	0/0:23,0:23:60.21:0,60,8063	0/0:26,0:26:72.25:0,72,10465	0/0:25,0:25:75.26:0,75,10608	0/0:17,0:17:51.18:0,51,7573	0/0:27,0:27:75.26:0,75,12677	0/0:26,0:26:75.25:0,75,10722	0/0:43,0:43:99:0,129,20497	0/0:13,0:13:39.13:0,39,5699
chr10	47976237	.	A	ATG	12238.19	PASS	AB=0.628;AC=26;AF=0.464;AN=56;BaseQRankSum=-13.163;DP=753;FS=11.391;HRun=0;HaplotypeScore=91.2403;InbreedingCoeff=0.8693;MQ=67.65;MQ0=4;MQRankSum=-1.217;QD=30.22;ReadPosRankSum=2.700;VQSLOD=6.5503;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:51.15:0,51,612	0/0:12,0:12:27.08:0,27,326	0/0:39,0:30:29.26:0,29,368	0/0:35,0:28:34.06:0,34,402	1/1:11,35:46:51.12:1311,51,0	0/0:17,0:18:47.98:0,48,557	0/0:21,0:21:54.12:0,54,613	0/0:39,0:40:65.74:0,66,795	1/1:4,26:29:33.05:1021,33,0	1/1:10,28:38:48.04:1195,48,0	1/1:6,18:24:5.80:590,6,0	1/1:3,20:23:17.99:781,18,0	1/1:1,18:19:42.14:674,42,0	0/0:22,0:22:54.16:0,54,649	0/0:25,0:25:66.20:0,66,796	0/0:17,0:17:35.94:0,36,412	1/1:9,19:27:18.01:781,18,0	0/1:12,20:32:99:797,0,108	0/0:16,0:16:18.03:0,18,191	0/0:18,0:18:33.10:0,33,398	0/0:30,0:32:84.04:0,84,953	1/1:6,20:26:51.17:819,51,0	1/1:6,21:27:41.22:806,41,0	1/1:1,18:18:12:686,12,0	0/1:11,14:25:0.06:493,0,0	1/1:8,27:35:48.05:1201,48,0	0/0:23,0:24:56.99:0,57,654	1/1:7,25:32:49.45:1084,49,0
chr10	47976417	.	GCCTCTC	G	4550.72	PASS	AB=0.922;AC=32;AF=0.571;AN=56;BaseQRankSum=5.365;DP=584;FS=2.741;HRun=0;HaplotypeScore=121.1213;InbreedingCoeff=0.6384;MQ=65.91;MQ0=14;MQRankSum=-5.107;QD=13.38;ReadPosRankSum=4.261;VQSLOD=3.5947;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,21:35:14.95:188,15,0	0/0:7,0:7:12.04:0,12,337	0/0:34,0:19:12.43:0,12,188	0/0:35,0:24:4.63:0,5,93	1/1:4,11:15:9.03:136,9,0	0/0:10,0:10:18.03:0,18,392	0/0:34,0:33:45.12:0,45,1042	0/1:20,0:17:4.76:5,0,180	1/1:8,17:25:21.07:411,21,0	1/1:7,21:27:57.12:987,57,0	1/1:3,4:7:6.02:124,6,0	1/1:6,12:18:15.05:306,15,0	1/1:8,9:17:15.05:303,15,0	0/0:16,0:21:12.04:0,12,231	0/0:29,0:28:57.20:0,57,1619	0/0:12,0:11:11.63:0,12,151	1/1:8,17:24:12.04:249,12,0	1/1:7,7:13:3.01:62,3,0	0/1:12,0:14:33.74:34,0,36	0/0:21,0:21:5.91:0,6,38	0/0:40,0:39:21.52:0,22,303	1/1:2,11:12:18.02:331,18,0	0/1:6,5:11:0:0,0,0	1/1:9,17:23:5.98:124,6,0	1/1:6,11:16:12.04:249,12,0	1/1:8,17:25:47.21:801,47,0	0/1:20,0:20:53.39:53,0,146	1/1:2,6:8:9.03:187,9,0
chr10	47976447	.	CCCTCAA	C	1354.89	PASS	AB=0.978;AC=18;AF=0.321;AN=56;BaseQRankSum=9.545;DP=522;FS=2.219;HRun=0;HaplotypeScore=114.8355;InbreedingCoeff=-0.4686;MQ=58.79;MQ0=19;MQRankSum=-8.684;QD=4.34;ReadPosRankSum=4.340;VQSLOD=2.0840;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:31,0:30:17.50:17,0,412	0/0:8,0:8:24.08:0,24,538	0/0:32,0:14:23.07:0,23,331	0/0:19,0:9:5.75:0,6,174	0/0:20,0:20:14.69:0,15,529	0/0:12,0:10:21.07:0,21,537	0/0:35,0:33:90.18:0,90,1848	0/1:21,0:21:99:102,0,517	0/1:19,0:18:44.54:120,0,45	0/1:29,0:27:99:171,0,391	0/1:11,0:11:22.56:23,0,349	0/1:16,0:16:88.56:89,0,168	0/1:11,0:11:80.96:103,0,81	0/0:11,0:11:22.63:0,23,383	0/0:27,0:26:74.98:0,75,1840	0/1:8,0:8:83.85:84,0,287	0/1:25,0:24:64.45:64,0,366	0/1:16,0:13:2.26:2,0,180	0/1:13,0:12:97.70:98,0,330	0/1:8,1:9:32.86:33,0,283	0/0:21,9:29:50.68:0,51,1094	0/1:17,0:16:92.87:93,0,229	0/0:16,0:16:37.30:0,37,562	0/1:22,0:20:37.83:38,0,115	0/1:15,0:14:70.32:70,0,198	0/1:22,0:23:99:163,0,312	0/1:12,6:18:99:190,0,556	0/1:8,0:7:33:53,0,33
chr10	47976604	.	AAAG	A	587.42	PASS	AB=0.969;AC=16;AF=0.286;AN=56;BaseQRankSum=1.003;DP=565;FS=27.846;HRun=0;HaplotypeScore=79.2239;InbreedingCoeff=-0.2390;MQ=55.68;MQ0=9;MQRankSum=-4.513;QD=1.72;ReadPosRankSum=-2.975;VQSLOD=-0.6043;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:43,2:44:46.26:46,0,412	0/0:7,0:7:17.90:0,18,260	1/1:11,0:2:2.04:6,2,0	0/0:17,0:5:3.63:0,4,47	0/0:35,0:33:19.70:0,20,574	0/0:22,0:22:24.13:0,24,478	0/0:22,0:21:60.05:0,60,835	0/0:21,0:18:38.06:0,38,378	0/1:12,0:12:34.38:34,0,188	0/1:30,0:30:69.72:70,0,615	0/1:25,0:25:44.10:44,0,433	0/1:16,0:16:44.61:45,0,149	0/0:15,0:15:29.82:0,30,323	0/0:14,0:14:20.09:0,20,302	0/1:18,0:18:1.12:1,0,423	0/1:19,0:19:2.54:33,0,3	0/1:33,0:33:45.38:45,0,348	0/1:22,2:23:14.59:15,0,179	0/0:22,0:19:17.49:0,17,500	0/0:14,0:14:10.25:0,10,248	0/0:8,0:8:20.61:0,21,191	0/1:13,2:15:30.59:31,0,229	0/1:20,0:20:96.69:97,0,210	0/0:15,0:12:8.99:0,9,79	0/1:21,4:23:59.51:60,0,192	0/1:30,2:32:99:202,0,322	0/1:17,0:17:9.61:10,0,92	0/0:11,0:11:8.76:0,9,78
chr10	47976605	.	AAG	A	595.52	PASS	AB=0.984;AC=16;AF=0.286;AN=56;BaseQRankSum=1.899;DP=557;FS=25.708;HRun=0;HaplotypeScore=71.3028;InbreedingCoeff=-0.1626;MQ=55.64;MQ0=9;MQRankSum=-4.505;QD=1.87;ReadPosRankSum=-3.409;VQSLOD=-0.6452;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:42,1:42:18.92:19,0,316	0/0:7,0:7:17.71:0,18,201	1/1:11,0:2:2.04:6,2,0	0/0:16,0:5:1.97:0,2,29	0/0:34,1:33:16.83:0,17,426	0/0:22,0:22:2.38:0,2,382	0/0:22,0:21:59.46:0,59,687	0/0:21,0:18:43.49:0,43,345	0/1:11,1:12:35.91:36,0,138	0/1:29,0:29:46.60:47,0,461	0/1:25,0:25:33.58:34,0,337	0/1:15,1:16:44.34:44,0,104	0/0:15,0:15:29.22:0,29,246	0/0:14,0:14:19.67:0,20,233	0/0:18,0:18:12.01:0,12,341	1/1:19,0:19:9.94:93,10,0	0/1:33,0:33:67.27:67,0,283	0/1:24,0:23:30.79:31,0,129	0/0:22,0:19:22.60:0,23,385	0/0:14,0:14:9.19:0,9,166	0/0:8,0:8:19.16:0,19,153	0/1:15,0:15:18.39:18,0,162	0/1:20,0:20:99:114,0,152	0/0:15,0:12:8.85:0,9,61	0/1:23,0:21:44.79:45,0,128	0/1:30,1:31:99:190,0,267	0/1:17,0:17:6.96:7,0,67	0/0:10,0:10:8.71:0,9,65
chr10	47977370	.	C	CTT	3782.64	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-0.245;DP=480;FS=1.496;HRun=15;HaplotypeScore=102.1692;InbreedingCoeff=0.8326;MQ=59.13;MQ0=10;MQRankSum=-3.510;QD=15.25;ReadPosRankSum=-4.792;VQSLOD=1.5472;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:25:28.26:0,28,227	0/0:2,0:2:2.95:0,3,24	0/0:8,0:5:5.36:0,5,35	0/0:10,0:7:1.90:0,2,6	1/1:12,6:23:21:350,21,0	0/0:23,0:25:41.03:0,41,395	0/0:17,0:23:9.34:0,9,173	0/0:5,0:25:50.97:0,51,211	1/1:8,6:14:23.91:238,24,0	1/1:14,6:21:17.55:357,18,0	1/1:12,11:25:43.81:427,44,0	1/1:5,3:8:14.24:140,14,0	1/1:9,6:16:31.70:296,32,0	0/0:5,0:11:16.27:0,16,69	0/0:8,0:9:7.64:0,8,56	0/0:11,0:11:14.74:0,15,118	1/1:13,3:19:5.79:204,6,0	1/1:15,4:17:35.72:291,36,0	0/0:10,0:23:5.74:0,6,85	0/0:9,0:25:39.95:0,40,181	0/0:5,0:12:8.16:0,8,35	1/1:7,5:13:17.59:201,18,0	1/1:11,8:19:27.06:284,27,0	1/1:5,4:12:5.10:110,5,0	1/1:7,4:14:25.29:248,25,0	1/1:14,9:23:35.96:381,36,0	0/0:5,0:19:19.06:0,19,81	1/1:2,8:13:5.05:256,5,0
chr10	47977715	.	GTTAT	G	472.65	PASS	AB=0.625;AC=1;AF=0.018;AN=56;BaseQRankSum=5.447;DP=622;FS=2.619;HRun=0;HaplotypeScore=99.3882;InbreedingCoeff=-0.0193;MQ=70.99;MQ0=0;MQRankSum=-4.590;QD=31.51;ReadPosRankSum=1.133;VQSLOD=3.8172;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:63.10:0,63,1336	0/0:4,0:4:12.04:0,12,305	0/0:19,0:15:40.14:0,40,571	0/0:14,0:10:23.89:0,24,468	0/0:44,0:44:99:0,126,3343	0/0:15,0:15:42.12:0,42,1055	0/0:15,0:15:45.10:0,45,1058	0/0:28,0:28:72.21:0,72,1693	0/0:23,0:23:69.18:0,69,1638	0/0:26,0:26:78.25:0,78,1921	0/0:31,0:31:87.22:0,87,2240	0/0:16,0:16:48.15:0,48,1198	0/0:25,0:25:75.24:0,75,1984	0/0:24,0:24:69.24:0,69,1815	0/0:33,0:33:96.25:0,96,2249	0/1:6,9:15:46.06:547,0,46	0/0:15,0:15:45.07:0,45,1103	0/0:13,0:13:39.11:0,39,944	0/0:21,0:20:63.18:0,63,1377	0/0:27,0:27:75.26:0,75,2051	0/0:29,0:29:84.20:0,84,1848	0/0:20,0:20:60.11:0,60,1424	0/0:29,0:29:81.18:0,81,1929	0/0:27,0:27:81.24:0,81,2058	0/0:18,0:18:51.09:0,51,1213	0/0:20,0:20:54.18:0,54,1320	0/0:31,0:31:93.30:0,93,2442	0/0:17,0:17:48.14:0,48,1199
chr10	47977734	.	A	AT	263.33	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=3.708;DP=585;FS=5.550;HRun=7;HaplotypeScore=58.8911;InbreedingCoeff=0.5489;MQ=69.22;MQ0=0;MQRankSum=-2.980;QD=9.40;ReadPosRankSum=-0.959;VQSLOD=0.8744;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:48.10:0,48,489	0/0:5,0:5:15.03:0,15,153	0/0:19,0:13:27.76:0,28,256	0/1:14,0:11:1.29:1,0,137	0/0:43,0:43:99:0,114,1161	0/0:14,0:14:42.10:0,42,428	0/0:14,0:14:33.07:0,33,336	0/0:22,0:22:63.11:0,63,629	0/0:23,0:23:66.15:0,66,673	0/0:27,0:27:63.13:0,63,642	0/0:35,0:35:96.20:0,96,973	0/0:17,0:17:42.09:0,42,429	0/0:28,0:28:72.16:0,72,734	0/0:24,0:24:69.14:0,69,697	0/0:27,0:27:61.19:0,61,740	1/1:2,11:13:2.49:340,2,0	0/0:18,0:18:45.09:0,45,456	0/0:11,0:11:20.92:0,21,261	0/0:16,0:16:36.05:0,36,354	0/0:31,0:31:87.18:0,87,881	0/0:20,0:20:54.12:0,54,551	0/0:16,0:16:45.10:0,45,459	0/0:25,0:25:63.13:0,63,638	0/0:29,0:29:81.18:0,81,826	0/0:14,0:14:39.08:0,39,396	0/0:18,0:18:48.10:0,48,485	0/0:31,0:31:81.13:0,81,809	0/0:13,0:13:30.06:0,30,306
chr10	47977927	.	GAAGGT	G	722.25	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.620;DP=682;FS=2.367;HRun=0;HaplotypeScore=122.4524;InbreedingCoeff=0.9959;MQ=86.18;MQ0=0;MQRankSum=-4.342;QD=40.13;ReadPosRankSum=-0.758;VQSLOD=3.7127;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:90.31:0,90,2673	0/0:15,0:15:45.15:0,45,1365	0/0:20,0:20:48.16:0,48,1200	0/0:24,0:24:69.06:0,69,1819	0/0:32,0:32:96.33:0,96,2908	0/0:26,0:26:72.25:0,72,2111	0/0:25,0:25:72.25:0,72,2091	0/0:36,0:36:93.32:0,93,2679	0/0:23,0:23:69.24:0,69,2113	0/0:31,0:31:93.32:0,93,2777	0/0:24,0:24:72.25:0,72,2138	0/0:18,0:18:51.17:0,51,1592	0/0:30,0:30:84.27:0,84,2425	0/0:18,0:18:54.19:0,54,1653	0/0:24,0:24:72.24:0,72,2165	1/1:0,18:18:39.13:817,39,0	0/0:24,0:24:66.23:0,66,2021	0/0:14,0:13:42.14:0,42,1194	0/0:24,0:24:69.22:0,69,1917	0/0:29,0:29:84.27:0,84,2461	0/0:17,0:17:51.18:0,51,1554	0/0:24,0:24:72.25:0,72,2228	0/0:32,0:32:93.32:0,93,2834	0/0:25,0:25:71.05:0,71,2049	0/0:26,0:26:75.26:0,75,2325	0/0:31,0:31:90.31:0,90,2685	0/0:35,0:35:99:0,105,3212	0/0:7,0:7:21.07:0,21,657
chr10	47978034	.	TA	T	956.43	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.125;DP=657;FS=3.480;HRun=2;HaplotypeScore=64.2143;InbreedingCoeff=0.9951;MQ=89.06;MQ0=0;MQRankSum=-2.652;QD=30.85;ReadPosRankSum=0.037;VQSLOD=3.1339;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:69.23:0,69,1031	0/0:8,0:8:24.08:0,24,360	0/0:28,0:28:71.49:0,71,1009	0/0:23,0:23:23.81:0,24,706	0/0:37,0:37:99:0,108,1610	0/0:20,0:20:54.18:0,54,807	0/0:20,0:20:60.20:0,60,894	0/0:44,0:44:99:0,132,1917	0/0:19,0:19:57.19:0,57,851	0/0:23,0:23:63.21:0,63,941	0/0:24,0:24:72.23:0,72,1060	0/0:16,0:16:48.16:0,48,719	0/0:15,0:15:45.11:0,45,650	0/0:23,0:23:69.23:0,69,1026	0/0:26,0:26:72.24:0,72,1059	1/1:1,30:31:81.26:1051,81,0	0/0:31,0:31:93.29:0,93,1371	0/0:17,0:17:51.17:0,51,753	0/0:21,0:21:63.20:0,63,916	0/0:30,0:30:87.25:0,87,1247	0/0:33,0:33:99:0,99,1479	0/0:24,0:24:35.07:0,35,988	0/0:21,0:21:63.21:0,63,944	0/0:16,0:16:48.16:0,48,716	0/0:22,0:22:66.22:0,66,989	0/0:22,0:22:66.22:0,66,989	0/0:30,0:30:90.30:0,90,1349	0/0:10,0:10:30.10:0,30,450
chr10	47978518	.	A	AT	3135.31	PASS	AB=0.560;AC=9;AF=0.161;AN=56;BaseQRankSum=-10.044;DP=738;FS=27.459;HRun=9;HaplotypeScore=70.3132;InbreedingCoeff=0.9138;MQ=78.70;MQ0=0;MQRankSum=-1.535;QD=23.57;ReadPosRankSum=0.844;VQSLOD=2.2450;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:36:99:0,104,891	0/0:13,0:13:35.99:0,36,313	0/0:17,0:18:30.61:0,31,219	0/0:24,0:22:35.07:0,35,258	0/0:29,0:29:80.98:0,81,703	0/0:33,1:34:59.79:0,60,740	0/0:12,0:14:37.05:0,37,294	0/0:39,0:39:83.94:0,84,722	0/0:20,0:21:53.01:0,53,449	0/0:40,0:40:99:0,108,938	0/0:26,0:26:62.97:0,63,547	0/0:22,0:23:62.01:0,62,522	0/0:29,0:29:77.94:0,78,668	1/1:5,25:30:60.16:663,60,0	0/0:20,0:20:56.98:0,57,495	0/0:26,0:26:62.95:0,63,543	0/0:26,1:27:41.80:0,42,592	0/0:20,0:20:50.97:0,51,443	1/1:3,16:19:48.12:524,48,0	0/1:6,22:28:3.01:640,0,3	1/1:3,10:13:27.07:299,27,0	0/0:30,0:31:80.01:0,80,683	0/0:23,0:24:71.02:0,71,604	0/0:23,0:25:70.04:0,70,581	0/0:26,0:27:64.96:0,65,543	0/0:41,0:43:99:0,106,895	1/1:7,35:43:99:1174,108,0	0/0:15,0:15:35.98:0,36,313
chr10	47979338	.	A	AT	4698.78	PASS	AB=1.000;AC=33;AF=0.589;AN=56;BaseQRankSum=-5.729;DP=431;FS=4.553;HRun=10;HaplotypeScore=44.8491;InbreedingCoeff=0.8764;MQ=60.90;MQ0=2;MQRankSum=-3.584;QD=19.18;ReadPosRankSum=2.056;VQSLOD=5.4924;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,28:31:41.52:646,42,0	0/0:7,0:7:17.98:0,18,148	0/0:11,0:7:8.50:0,8,52	0/1:17,0:11:36.57:37,0,51	1/1:7,10:18:35.71:347,36,0	0/0:18,1:19:18.95:0,19,362	0/0:9,0:10:23.01:0,23,178	0/0:29,1:30:23.15:0,23,384	1/1:1,11:12:27.07:287,27,0	1/1:3,12:14:33.08:352,33,0	1/1:3,14:16:29.18:374,29,0	1/1:1,9:11:29.94:302,30,0	1/1:1,11:12:24.06:252,24,0	0/0:6,0:6:14.98:0,15,123	0/0:20,0:20:50.93:0,51,418	1/1:8,0:10:16.50:79,17,0	1/1:5,19:24:42.11:447,42,0	1/1:3,16:17:24.06:256,24,0	0/0:25,0:26:58.95:0,59,473	0/0:20,0:20:41.91:0,42,342	0/0:12,1:13:29.95:0,30,244	1/1:0,3:3:6.02:64,6,0	1/1:1,4:5:9.02:96,9,0	1/1:0,4:4:9.02:96,9,0	1/1:3,12:16:38.89:386,39,0	1/1:2,16:19:50.95:518,51,0	0/0:23,1:24:24.90:0,25,409	1/1:3,5:8:15.51:161,16,0
chr10	47979476	.	CT	C	6377.42	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=10.847;DP=470;FS=1.622;HRun=8;HaplotypeScore=45.9883;InbreedingCoeff=0.9531;MQ=63.42;MQ0=0;MQRankSum=-2.314;QD=25.31;ReadPosRankSum=3.975;VQSLOD=5.3391;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,33:34:66.43:816,66,0	0/0:8,0:8:18.06:0,18,217	0/0:16,0:12:24.07:0,24,286	0/0:12,0:11:0.36:0,0,258	1/1:0,28:28:78.12:753,78,0	0/0:18,0:18:51.16:0,51,615	0/0:16,0:16:48.01:0,48,557	0/0:23,0:23:54.15:0,54,639	1/1:0,8:8:24.04:232,24,0	1/1:3,20:23:60.09:579,60,0	1/1:3,13:16:39.06:377,39,0	1/1:0,10:10:27.04:261,27,0	1/1:1,11:12:30.04:290,30,0	0/0:5,0:5:15.05:0,15,181	0/0:21,0:21:60.16:0,60,701	0/0:10,0:10:27.08:0,27,326	1/1:2,26:28:75.12:724,75,0	1/1:2,16:18:42.07:406,42,0	0/0:26,0:26:63.19:0,63,759	0/0:20,0:20:57.17:0,57,687	0/0:22,0:22:48.15:0,48,580	1/1:0,16:16:45.07:435,45,0	1/1:0,16:16:42.07:406,42,0	1/1:2,12:14:30.05:290,30,0	1/1:0,10:10:30.05:289,30,0	1/1:1,15:16:45.07:434,45,0	0/0:19,0:19:54.14:0,54,628	1/1:0,3:3:9.01:87,9,0
chr10	47980609	.	G	GA	24499.96	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-5.042;DP=777;FS=3.356;HRun=2;HaplotypeScore=82.9033;InbreedingCoeff=1.0000;MQ=92.42;MQ0=0;MQRankSum=-10.565;QD=39.64;ReadPosRankSum=5.578;VQSLOD=4.8809;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,63:65:99:2463,172,0	0/0:14,0:14:39.12:0,39,484	0/0:29,0:29:78.22:0,78,948	0/0:38,0:38:99:0,105,1225	1/1:0,35:34:99:1486,105,0	0/0:26,0:26:75.21:0,75,914	0/0:27,0:27:78.20:0,78,928	1/1:0,26:26:78.26:1121,78,0	1/1:1,19:20:57.19:806,57,0	1/1:3,29:32:87.29:1239,87,0	1/1:2,21:23:60.20:864,60,0	1/1:0,30:30:84.28:1210,84,0	1/1:2,24:26:63.18:881,63,0	1/1:1,22:23:66.22:951,66,0	0/0:25,0:25:72.23:0,72,893	1/1:1,28:29:84.28:1210,84,0	1/1:1,27:28:75.25:1080,75,0	1/1:0,18:18:45.15:648,45,0	1/1:1,13:14:39.12:543,39,0	1/1:0,36:36:99:1532,108,0	1/1:2,31:33:87.29:1253,87,0	1/1:1,23:24:60.20:864,60,0	1/1:0,16:16:48.16:691,48,0	1/1:0,30:30:81.27:1167,81,0	1/1:0,26:26:72.24:1037,72,0	1/1:2,28:30:84.28:1208,84,0	1/1:0,26:26:72.03:1037,72,0	1/1:0,28:28:84.28:1209,84,0
chr10	47981328	.	C	CGGA	6607.20	PASS	AB=0.754;AC=18;AF=0.321;AN=56;BaseQRankSum=12.935;DP=835;FS=25.291;HRun=0;HaplotypeScore=254.8386;InbreedingCoeff=-0.4795;MQ=47.87;MQ0=64;MQRankSum=-12.245;QD=12.56;ReadPosRankSum=0.605;VQSLOD=3.2393;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:30,6:35:99:125,0,770	0/0:6,0:6:18.06:0,18,336	0/0:59,0:24:54.10:0,54,918	0/0:65,0:25:66.01:0,66,1084	0/0:17,8:24:17.88:0,18,331	0/0:18,0:18:54.19:0,54,1005	0/0:21,0:21:57.15:0,57,1015	0/1:31,4:31:99:174,0,1301	0/1:19,7:25:99:292,0,688	0/1:26,14:35:99:1058,0,787	0/0:17,6:22:9:0,9,471	0/1:17,10:29:99:534,0,700	0/1:25,10:35:99:561,0,1065	0/1:27,8:37:99:401,0,802	0/0:28,0:28:81.25:0,81,1447	0/1:15,8:22:99:404,0,621	0/1:16,5:21:99:158,0,653	0/1:10,5:17:99:295,0,461	0/1:26,1:23:99:131,0,959	0/1:17,12:29:99:195,0,426	0/0:44,4:37:71.88:0,72,1081	0/1:13,5:20:52.04:52,0,209	0/0:11,3:13:22.90:0,23,406	0/1:23,7:29:88.40:88,0,434	0/1:12,9:22:99:455,0,413	0/1:40,11:48:99:722,0,1746	0/1:10,13:22:99:768,0,299	0/1:3,3:5:88.24:194,0,88
chr10	47981333	.	C	CAT	1872.12	PASS	AB=0.861;AC=15;AF=0.268;AN=56;BaseQRankSum=14.844;DP=855;FS=12.605;HRun=0;HaplotypeScore=269.2707;InbreedingCoeff=-0.3696;MQ=47.52;MQ0=64;MQRankSum=-11.934;QD=4.28;ReadPosRankSum=-0.706;VQSLOD=0.9948;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,2:37:9.02:0,9,793	0/0:6,0:6:18.06:0,18,275	0/0:57,0:23:58.41:0,58,717	0/0:70,0:27:42.07:0,42,645	0/0:22,3:24:17.82:0,18,275	0/0:20,0:20:57.14:0,57,806	0/0:19,0:19:51.14:0,51,726	0/0:37,0:33:43.73:0,44,1162	0/1:23,5:26:99:104,0,641	0/1:34,9:36:99:344,0,712	0/0:19,4:22:26.86:0,27,403	0/1:23,7:29:99:207,0,526	0/1:30,6:35:99:202,0,870	0/1:33,4:37:99:131,0,712	0/0:27,0:26:72.24:0,72,1100	0/1:18,5:21:99:112,0,514	0/1:18,4:21:24.75:25,0,557	0/1:16,2:18:72.57:73,0,410	0/0:30,0:24:48.52:0,49,832	0/1:22,10:31:61.64:62,0,386	0/0:50,1:40:78.23:0,78,1096	0/1:18,3:21:15.73:16,0,184	0/0:12,2:13:24.04:0,24,330	0/1:34,1:32:20.56:21,0,472	0/1:18,4:22:99:156,0,401	0/1:53,4:51:99:188,0,1453	0/1:14,10:23:99:320,0,284	0/1:9,0:9:70.25:70,0,118
chr10	47981342	.	CCA	C	7472.89	PASS	AB=0.634;AC=27;AF=0.482;AN=56;BaseQRankSum=3.311;DP=796;FS=2.929;HRun=0;HaplotypeScore=209.0910;InbreedingCoeff=0.7659;MQ=49.86;MQ0=56;MQRankSum=-0.743;QD=18.50;ReadPosRankSum=5.586;VQSLOD=5.0237;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,31:36:63.16:783,63,0	0/0:6,0:6:12.04:0,12,201	0/0:47,0:21:34.61:0,35,459	0/0:58,0:23:28.35:0,28,566	1/1:9,17:26:24.02:305,24,0	0/0:19,0:19:45.15:0,45,746	0/0:16,0:16:45.15:0,45,736	0/0:29,1:28:22:0,22,900	1/1:8,19:25:35.45:630,35,0	0/1:24,16:33:46.25:512,0,46	0/1:7,14:20:7:279,0,7	0/1:9,21:29:11.29:499,0,11	1/1:8,27:34:16.65:838,17,0	0/0:32,0:33:72.94:0,73,1094	0/0:28,1:28:34.04:0,34,1088	0/0:9,0:22:42.36:0,42,347	1/1:7,14:21:4.93:421,5,0	1/1:4,10:15:9.08:333,9,0	0/0:30,0:24:60.20:0,60,924	0/0:29,1:29:33.56:0,34,534	0/0:47,1:39:43.06:0,43,1232	1/1:8,12:20:16.80:199,17,0	1/1:6,9:14:18.06:229,18,0	1/1:7,25:31:41.28:555,41,0	1/1:7,15:22:18.89:403,19,0	1/1:16,37:47:49.89:1253,50,0	0/0:22,0:21:48.53:0,49,644	1/1:2,6:8:18.89:233,19,0
chr10	47981721	.	AAC	A	1457.89	PASS	AB=0.993;AC=25;AF=0.446;AN=56;BaseQRankSum=5.121;DP=629;FS=0.498;HRun=0;HaplotypeScore=170.2903;InbreedingCoeff=0.1101;MQ=52.29;MQ0=16;MQRankSum=-1.077;QD=3.69;ReadPosRankSum=1.269;VQSLOD=2.7814;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:24.85:0,25,109	0/0:7,0:7:15.05:0,15,219	0/0:53,0:17:8.94:0,9,71	0/0:58,0:21:8.51:0,9,78	0/0:15,0:15:5.44:0,5,28	0/0:19,3:23:1.13:0,1,572	0/0:22,1:23:3.94:0,4,459	0/1:45,0:42:22.05:22,0,418	0/1:25,0:25:10.34:32,0,10	0/1:18,0:18:12.59:27,0,13	0/1:16,0:16:5.76:6,0,28	0/1:20,0:20:6.27:6,0,11	0/1:24,0:24:36.77:37,0,39	1/1:25,0:26:32.90:280,33,0	0/1:26,3:29:13.81:14,0,883	0/0:22,0:24:34.94:0,35,247	0/1:18,0:18:0.84:38,0,1	1/1:7,0:7:2.04:6,2,0	0/1:13,0:13:7.21:164,0,7	1/1:18,0:18:26.69:201,27,0	1/1:57,0:56:36.55:450,37,0	0/0:7,0:6:5.34:0,5,22	0/1:9,0:9:5.59:15,0,6	0/1:15,0:15:0:0,0,0	0/1:16,0:16:20.02:35,0,20	1/1:23,0:23:16.77:91,17,0	1/1:11,0:11:23.90:193,24,0	0/1:5,0:5:7.90:8,0,9
chr10	47981741	.	CACACACCACACACACACACACAT	C	8145.78	PASS	AB=1.000;AC=27;AF=0.482;AN=56;BaseQRankSum=9.028;DP=674;FS=4.856;HRun=0;HaplotypeScore=318.1041;InbreedingCoeff=0.6257;MQ=46.09;MQ0=27;MQRankSum=-10.068;QD=34.08;ReadPosRankSum=2.527;VQSLOD=3.0497;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:21,0:21:63.21:300,0,63	0/0:9,0:9:27.09:0,27,1652	0/0:79,0:16:46.04:0,46,1308	0/0:82,0:18:38.67:0,39,1396	1/1:2,11:13:6.02:191,6,0	0/0:27,0:27:75.26:0,75,4230	0/0:24,0:24:61.91:0,62,3789	0/0:41,0:37:99:0,106,3743	1/1:22,0:22:22.58:485,23,0	1/1:3,8:12:26.42:1075,26,0	1/1:3,13:16:15.94:600,16,0	1/1:19,0:19:24.76:400,25,0	0/1:21,0:21:30.32:739,0,30	0/0:29,0:29:32.52:0,33,1809	0/0:30,0:30:87.30:0,87,5883	0/1:28,0:28:26.73:27,0,673	1/1:5,13:18:12.16:871,12,0	1/1:1,0:2:3.01:162,3,0	0/0:13,0:17:48.15:0,48,1488	0/0:20,0:19:35.99:0,36,1450	0/0:62,0:60:57.27:0,57,3420	1/1:8,0:7:6.79:73,7,0	0/1:9,0:9:98.08:198,0,98	0/1:15,0:15:0.09:1,0,0	1/1:3,9:12:24.08:1146,24,0	1/1:4,12:16:27.09:1544,27,0	0/0:13,0:13:27.47:0,27,1424	1/1:4,1:5:12.01:335,12,0
chr10	47981745	.	CACCA	C	4506.10	PASS	AB=0.869;AC=24;AF=0.429;AN=56;BaseQRankSum=4.381;DP=654;FS=3.147;HRun=0;HaplotypeScore=174.7821;InbreedingCoeff=0.1335;MQ=46.34;MQ0=30;MQRankSum=0.748;QD=12.91;ReadPosRankSum=5.304;VQSLOD=4.5469;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:20:22.05:0,22,109	0/0:9,0:9:27.09:0,27,596	0/0:82,0:18:48.09:0,48,492	0/0:87,0:20:45.64:0,46,607	0/0:12,0:12:5.65:0,6,28	0/0:30,0:30:83.66:0,84,1524	0/0:22,0:22:62.65:0,63,1295	0/1:41,0:37:99:562,0,360	0/1:8,0:20:9.25:87,0,9	0/1:10,0:10:40.86:68,0,41	0/1:15,0:15:18.46:18,0,36	0/1:7,0:18:22.07:37,0,22	0/1:6,0:19:35.59:118,0,36	1/1:3,25:28:33.58:686,34,0	0/0:30,0:31:89.33:0,89,2033	0/1:25,0:25:1.24:1,0,455	0/1:15,0:15:4.49:92,0,4	0/0:1,0:1:2.84:0,3,14	0/1:17,0:16:11.44:345,0,11	1/1:3,15:17:32.98:528,33,0	1/1:7,57:62:58.40:1147,58,0	0/0:3,0:7:5.34:0,5,22	0/1:2,0:7:5.04:42,0,5	1/1:14,0:14:0.47:1,0,0	0/1:9,0:9:22.56:88,0,23	1/1:14,0:14:13.11:174,13,0	1/1:0,13:13:24.02:490,24,0	0/1:2,0:2:8.72:22,0,9
chr10	47981746	.	AC	A	1767.95	PASS	AB=0.816;AC=38;AF=0.679;AN=56;BaseQRankSum=13.449;DP=635;FS=0.000;HRun=2;HaplotypeScore=160.5239;InbreedingCoeff=0.7883;MQ=46.62;MQ0=29;MQRankSum=-7.212;QD=5.56;ReadPosRankSum=6.833;VQSLOD=0.3776;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:13,3:18:22.78:145,23,0	0/0:9,0:9:27.09:0,27,378	0/0:82,1:18:47.03:0,47,581	0/0:86,0:20:45.71:0,46,567	1/1:11,1:12:2.44:17,2,0	0/0:29,0:30:81.92:0,82,1027	0/0:21,0:21:59.41:0,59,820	0/0:39,0:36:61.36:0,61,406	1/1:13,5:18:30.04:252,30,0	1/1:9,1:10:17.34:141,17,0	1/1:14,1:15:11.31:96,11,0	1/1:11,3:14:15.81:110,16,0	1/1:15,1:16:30.88:197,31,0	1/1:28,0:28:24.01:71,24,0	0/0:31,0:31:87.53:0,88,1191	0/1:23,2:25:8.28:202,0,8	1/1:13,2:15:14.98:82,15,0	1/1:1,0:1:2.94:18,3,0	0/0:17,0:16:24.50:0,25,155	1/1:18,0:17:14.62:44,15,0	1/1:62,0:61:41.02:122,41,0	1/1:6,1:6:11.91:117,12,0	1/1:5,0:5:7.49:31,7,0	0/1:3,5:12:0:0,0,0	1/1:9,0:9:19.28:115,19,0	1/1:13,1:14:23.10:149,23,0	1/1:13,0:13:15.76:46,16,0	1/1:1,1:2:2.84:14,3,0
chr10	47981747	.	CCA	C	2507.64	PASS	AB=0.965;AC=31;AF=0.574;AN=54;BaseQRankSum=6.612;DP=669;FS=5.826;HRun=0;HaplotypeScore=178.8838;InbreedingCoeff=0.4339;MQ=45.75;MQ0=28;MQRankSum=-0.529;QD=6.70;ReadPosRankSum=5.235;VQSLOD=2.7644;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:18:4.48:0,4,20	0/0:9,0:9:27.02:0,27,403	0/0:83,0:17:38.68:0,39,408	0/0:88,0:19:39.61:0,40,484	0/1:13,0:13:0:0,0,0	0/0:29,1:30:5.34:0,5,890	0/0:21,0:21:56.94:0,57,851	1/1:14,25:36:56.49:834,56,0	1/1:21,0:21:11.34:56,11,0	0/1:12,0:13:21.14:21,0,62	0/1:19,0:20:4.46:12,0,4	0/1:15,0:15:9.39:13,0,9	1/1:16,0:16:16.02:75,16,0	1/1:28,0:28:32.95:300,33,0	0/0:31,0:31:46.85:0,47,1205	0/1:6,0:27:9.40:9,0,192	1/1:19,0:19:7.65:49,8,0	0/0:5,0:5:14.99:0,15,160	0/1:14,0:14:27.10:165,0,27	1/1:17,0:17:29.95:265,30,0	1/1:61,1:61:57.02:518,57,0	./.	1/1:6,0:6:5.68:28,6,0	1/1:14,0:14:0.47:1,0,0	1/1:11,0:11:8:50,8,0	0/1:20,0:20:55.42:55,0,85	1/1:13,0:13:23.69:225,24,0	1/1:3,0:3:2.84:14,3,0
chr10	47981751	.	A	ACACACAC	1116.19	PASS	AB=1.000;AC=4;AF=0.074;AN=54;BaseQRankSum=1.580;DP=678;FS=12.429;HRun=0;HaplotypeScore=235.8237;InbreedingCoeff=0.4292;MQ=45.36;MQ0=28;MQRankSum=-5.642;QD=18.60;ReadPosRankSum=-2.135;VQSLOD=1.2671;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:17:9.38:0,9,72	0/0:10,0:10:30.10:0,30,667	0/0:82,0:17:45.07:0,45,781	0/0:93,0:19:45.02:0,45,893	./.	0/0:29,0:29:72.20:0,72,1666	0/0:22,0:22:60.18:0,60,1405	0/0:40,0:37:92.07:0,92,1163	0/0:23,0:23:28.82:0,29,231	0/0:14,0:14:12.82:0,13,119	0/0:20,0:20:4.69:0,5,21	0/0:16,0:16:11.84:0,12,87	0/0:17,0:17:25.87:0,26,181	0/0:28,0:28:33.11:0,33,655	0/0:33,0:33:96.31:0,96,2201	1/1:13,9:28:29.16:1207,29,0	0/0:19,0:19:1.40:0,1,7	0/0:5,0:5:6.16:0,6,34	0/0:14,0:13:29.27:0,29,349	0/0:19,0:18:32.88:0,33,514	0/0:57,0:54:56.73:0,57,1117	0/0:6,0:6:5.91:0,6,38	0/0:7,0:7:6.01:0,6,55	0/1:12,0:12:0.09:0,0,0	0/0:12,0:12:12.26:0,12,73	0/1:20,0:20:8.56:9,0,150	0/0:13,0:13:24.55:0,25,460	0/0:3,0:3:3.07:0,3,11
chr10	47981804	.	AAC	A	7879.36	PASS	AB=1.000;AC=33;AF=0.589;AN=56;BaseQRankSum=15.985;DP=663;FS=13.526;HRun=0;HaplotypeScore=217.4132;InbreedingCoeff=0.8602;MQ=47.77;MQ0=14;MQRankSum=-12.783;QD=23.04;ReadPosRankSum=-1.375;VQSLOD=3.8683;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,36:40:93.05:1058,93,0	0/0:8,0:8:18.06:0,18,289	0/0:41,0:12:23.27:0,23,222	0/0:50,0:13:32.62:0,33,402	1/1:3,18:21:47.54:398,48,0	0/0:22,0:22:60.20:0,60,982	0/0:21,1:22:16.66:0,17,795	0/0:36,0:36:90.21:0,90,1376	1/1:2,30:32:92.74:909,93,0	1/1:5,28:33:92.83:1101,93,0	1/1:1,13:14:30.21:233,30,0	1/1:6,16:22:31.76:518,32,0	1/1:6,18:24:50.04:530,50,0	0/0:16,1:17:3.25:0,3,170	0/0:20,0:20:54.15:0,54,837	1/1:3,22:25:65.79:637,66,0	1/1:8,7:15:17.96:185,18,0	1/1:1,10:11:26.94:277,27,0	0/1:15,0:14:9.41:9,0,112	0/0:23,0:23:30.13:0,30,434	0/0:59,0:59:88.87:0,89,819	1/1:2,5:7:14.92:134,15,0	1/1:5,7:12:23.87:212,24,0	1/1:5,11:16:21.32:190,21,0	1/1:2,25:27:74.25:637,74,0	1/1:3,21:24:63.20:777,63,0	0/0:23,0:23:2.46:0,2,332	1/1:0,2:2:6.02:75,6,0
chr10	47981826	.	ACACACACG	A	13974.29	PASS	AB=0.962;AC=30;AF=0.536;AN=56;BaseQRankSum=15.317;DP=663;FS=3.804;HRun=0;HaplotypeScore=239.9431;InbreedingCoeff=0.8382;MQ=48.45;MQ0=15;MQRankSum=-14.948;QD=42.73;ReadPosRankSum=0.650;VQSLOD=4.5706;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,105,3809	0/0:5,0:5:12.03:0,12,319	0/1:55,0:12:8.01:8,0,400	0/0:54,0:21:47.20:0,47,971	1/1:2,19:21:57.19:1421,57,0	0/0:23,0:23:51.17:0,51,1757	0/0:18,0:18:36.12:0,36,1301	0/0:36,0:36:81.27:0,81,2574	1/1:10,22:32:66.23:1663,66,0	1/1:5,26:32:81.28:2138,81,0	1/1:7,9:16:24.51:489,25,0	1/1:7,15:22:48.16:1202,48,0	1/1:3,18:21:18.94:1307,19,0	0/1:15,1:16:43.44:43,0,1266	0/0:21,0:21:51.17:0,51,1960	0/0:24,0:24:45.15:0,45,1608	1/1:4,4:8:9.03:220,9,0	1/1:3,7:10:11.57:622,12,0	0/0:13,0:12:33.11:0,33,1034	0/0:23,0:23:60.21:0,60,2151	0/0:53,0:53:99:0,108,4098	1/1:1,4:5:12.04:317,12,0	1/1:4,9:13:36.12:905,36,0	1/1:12,7:18:15.99:329,16,0	1/1:7,19:26:63.22:1620,63,0	1/1:7,17:24:54.19:1412,54,0	0/0:21,0:21:54.19:0,54,2137	1/1:1,5:6:12.04:280,12,0
chr10	47981988	.	GA	G	11135.56	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=15.163;DP=480;FS=1.113;HRun=2;HaplotypeScore=57.3842;InbreedingCoeff=0.9841;MQ=70.51;MQ0=0;MQRankSum=-3.291;QD=37.00;ReadPosRankSum=3.214;VQSLOD=5.4238;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,19:19:51.17:661,51,0	0/0:3,0:3:9.03:0,9,135	0/0:10,0:10:30.08:0,30,413	0/0:6,0:6:12.04:0,12,167	1/1:0,30:30:87.28:1129,87,0	0/0:16,0:16:48.16:0,48,719	0/0:14,0:14:42.14:0,42,629	0/0:26,0:25:78.23:0,78,1093	1/1:1,17:17:45.15:584,45,0	1/1:0,24:24:72.23:933,72,0	1/1:0,18:18:51.17:662,51,0	1/1:0,12:12:36.12:465,36,0	1/1:0,15:15:42.14:545,42,0	0/0:7,0:7:21.07:0,21,313	0/0:8,0:8:24.08:0,24,358	0/0:16,0:16:23.33:0,23,649	1/1:1,27:28:81.26:1051,81,0	1/1:1,9:10:27.09:350,27,0	0/0:11,0:11:33.11:0,33,477	0/0:33,0:33:93.32:0,93,1392	0/0:6,0:6:18.06:0,18,270	1/1:0,12:12:33.11:428,33,0	1/1:0,21:21:63.20:818,63,0	1/1:0,6:6:18.06:234,18,0	1/1:0,29:29:87.28:1129,87,0	1/1:2,37:39:99:1406,111,0	0/0:23,0:23:69.23:0,69,1033	1/1:0,20:20:57.19:740,57,0
chr10	47982982	.	TAACA	T	8173.11	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=13.714;DP=518;FS=68.770;HRun=0;HaplotypeScore=109.0245;InbreedingCoeff=0.9830;MQ=100.60;MQ0=0;MQRankSum=-10.273;QD=46.97;ReadPosRankSum=2.981;VQSLOD=2.1651;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,138,3490	0/0:9,0:9:27.08:0,27,670	0/0:38,0:38:98.51:0,99,2571	0/0:23,0:23:63.22:0,63,1674	1/1:5,12:17:30.10:554,30,0	0/0:17,0:17:48.16:0,48,1296	0/0:18,0:18:51.16:0,51,1320	0/0:32,0:32:90.30:0,90,2351	1/1:0,9:9:27.09:506,27,0	1/1:2,8:10:27.09:497,27,0	1/1:0,8:8:23.95:344,24,0	1/1:2,18:20:51.17:954,51,0	1/1:3,14:17:42.14:796,42,0	0/0:21,0:21:60.21:0,60,1617	0/0:27,0:27:75.26:0,75,2020	0/0:19,0:19:57.20:0,57,1532	1/1:2,14:16:45.13:819,45,0	1/1:1,3:4:9.01:138,9,0	0/0:20,0:20:57.20:0,57,1497	0/0:23,0:23:63.22:0,63,1700	0/0:25,0:25:75.26:0,75,2026	1/1:1,12:13:36.08:641,36,0	1/1:1,8:9:26.96:401,27,0	1/1:1,23:24:57.09:1074,57,0	1/1:0,9:9:27.09:512,27,0	1/1:3,12:15:42.14:766,42,0	0/0:22,0:21:66.16:0,66,1658	1/1:0,3:3:9.03:171,9,0
chr10	47983029	.	A	ATC	15347.32	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-5.941;DP=645;FS=8.873;HRun=0;HaplotypeScore=99.2842;InbreedingCoeff=0.9951;MQ=88.40;MQ0=3;MQRankSum=-9.666;QD=46.51;ReadPosRankSum=2.544;VQSLOD=5.3546;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,60:60:99:2861,160,0	0/0:7,0:7:21.07:0,21,294	0/0:23,0:23:63.21:0,63,878	0/0:30,0:30:78.22:0,78,1051	1/1:1,29:30:75.08:1348,75,0	0/0:19,0:19:54.18:0,54,756	0/0:18,0:18:51.17:0,51,713	0/0:38,0:38:99:0,105,1426	1/1:2,12:15:36.12:648,36,0	1/1:1,22:23:66.23:1188,66,0	1/1:0,19:19:54.19:966,54,0	1/1:2,20:23:60.21:1079,60,0	1/1:2,23:24:60.21:1078,60,0	0/0:22,0:22:51.17:0,51,714	0/0:22,0:22:60.17:0,60,805	0/0:17,0:17:51.17:0,51,713	1/1:6,14:19:48.16:863,48,0	1/1:1,4:5:12.04:216,12,0	0/0:31,0:31:90.29:0,90,1244	0/0:24,0:24:72.24:0,72,1008	0/0:40,0:40:99:0,117,1636	1/1:2,14:16:42.14:755,42,0	1/1:1,11:12:30.10:539,30,0	1/1:3,27:30:69.24:1241,69,0	1/1:2,13:15:39.13:701,39,0	1/1:2,23:25:72.24:1270,72,0	0/0:24,0:24:66.21:0,66,907	1/1:0,11:11:33.11:594,33,0
chr10	47983579	.	T	TG	13018.45	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-11.550;DP=613;FS=1.711;HRun=2;HaplotypeScore=60.1625;InbreedingCoeff=0.9977;MQ=70.46;MQ0=1;MQRankSum=-1.582;QD=39.93;ReadPosRankSum=4.348;VQSLOD=5.1448;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,43:43:99:1768,123,0	0/0:5,0:5:15.05:0,15,186	0/0:13,0:13:36.10:0,36,430	0/0:22,0:20:44.80:0,45,495	1/1:0,23:23:63.21:907,63,0	0/0:20,0:20:60.19:0,60,744	0/0:20,0:20:57.18:0,57,706	0/0:41,0:41:99:0,105,1278	1/1:1,23:24:69.23:992,69,0	1/1:0,18:17:48.13:663,48,0	1/1:0,14:14:39.09:538,39,0	1/1:0,23:23:66.22:951,66,0	1/1:1,17:18:54.18:762,54,0	0/0:21,0:21:63.19:0,63,769	0/0:26,0:26:78.23:0,78,954	0/0:19,0:19:54.15:0,54,656	1/1:0,25:25:75.25:1080,75,0	1/1:1,17:18:51.16:714,51,0	0/0:22,0:22:66.19:0,66,804	0/0:28,0:28:81.25:0,81,1004	0/0:29,0:29:87.24:0,87,1050	1/1:0,12:12:33.11:472,33,0	1/1:1,17:18:42.01:603,42,0	1/1:1,20:21:57.19:817,57,0	1/1:2,21:23:66.22:939,66,0	1/1:1,29:30:90.26:1251,90,0	0/0:21,0:21:60.19:0,60,743	1/1:3,13:16:39.13:561,39,0
chr10	47984136	.	C	CCTCT	15978.94	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=12.383;DP=565;FS=4.621;HRun=0;HaplotypeScore=106.5607;InbreedingCoeff=0.9825;MQ=85.03;MQ0=0;MQRankSum=-4.931;QD=56.66;ReadPosRankSum=3.416;VQSLOD=6.6326;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,27:29:66.23:1758,66,0	0/0:5,0:5:15.04:0,15,251	0/0:19,0:19:57.19:0,57,1004	0/0:21,0:21:46.56:0,47,866	1/1:3,11:14:21.07:559,21,0	0/0:20,0:20:48.16:0,48,885	0/0:16,0:16:36.11:0,36,629	0/0:32,0:32:81.28:0,81,1496	1/1:3,15:19:45.15:1200,45,0	1/1:9,15:24:63.15:1505,63,0	1/1:4,17:21:36.12:959,36,0	1/1:3,15:18:39.13:1039,39,0	1/1:2,16:19:39.13:1040,39,0	0/0:16,0:16:45.12:0,45,775	0/0:27,0:27:81.26:0,81,1472	0/0:17,0:17:45.15:0,45,838	1/1:4,19:22:56.56:1455,57,0	1/1:3,9:12:27.09:720,27,0	0/0:22,0:22:60.21:0,60,1110	0/0:22,0:22:63.20:0,63,1143	0/0:34,0:34:93.31:0,93,1690	1/1:4,12:16:30.10:799,30,0	1/1:1,13:15:33.11:879,33,0	1/1:2,23:26:51.18:1359,51,0	1/1:6,9:16:27.09:702,27,0	1/1:5,19:26:75.24:1846,75,0	0/0:32,0:31:75.26:0,75,1390	1/1:2,2:4:6.02:160,6,0
chr10	47984689	.	T	TA	3929.44	PASS	AB=0.617;AC=30;AF=0.536;AN=56;BaseQRankSum=5.721;DP=527;FS=1.434;HRun=13;HaplotypeScore=71.8055;InbreedingCoeff=0.7665;MQ=69.13;MQ0=0;MQRankSum=-1.145;QD=11.46;ReadPosRankSum=-1.512;VQSLOD=3.0794;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,11:20:18.02:167,18,0	0/0:7,0:7:8.78:0,9,62	0/0:9,0:8:2.64:0,3,13	0/0:10,0:9:3.24:0,3,9	1/1:13,26:42:10.12:412,10,0	0/0:20,0:22:50.95:0,51,339	0/0:10,0:11:28.81:0,29,191	0/0:31,0:34:54.43:0,54,358	1/1:2,11:13:24.03:223,24,0	1/1:10,18:29:27.26:372,27,0	1/1:7,18:25:36.42:318,36,0	1/1:5,11:16:10.70:233,11,0	1/1:6,14:20:3.40:166,3,0	0/0:11,0:11:26.75:0,27,185	0/0:19,0:20:46.60:0,47,314	0/1:6,11:18:3.43:136,0,3	1/1:7,23:30:24.45:362,24,0	1/1:4,18:24:26.98:240,27,0	0/0:14,0:14:20.74:0,21,144	0/0:17,0:19:36.73:0,37,238	0/0:4,0:4:2.95:0,3,20	0/1:7,11:19:2.72:108,0,3	1/1:14,12:26:10.25:355,10,0	1/1:3,6:9:12.01:111,12,0	1/1:6,11:17:42.02:381,42,0	1/1:8,13:21:27:240,27,0	0/0:20,0:23:45.62:0,46,297	1/1:4,9:14:8.18:106,8,0
chr10	47985671	.	T	TA	6598.64	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=15.547;DP=544;FS=9.456;HRun=3;HaplotypeScore=109.7708;InbreedingCoeff=0.9920;MQ=76.08;MQ0=0;MQRankSum=-2.723;QD=23.48;ReadPosRankSum=3.144;VQSLOD=3.5519;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,25:32:59.80:674,60,0	0/0:5,0:5:12.04:0,12,167	0/0:11,0:11:25.56:0,26,298	0/0:20,0:20:29.57:0,30,529	1/1:3,19:22:33.41:438,33,0	0/0:21,0:21:63.20:0,63,865	0/0:8,0:8:24.08:0,24,335	0/0:51,0:51:99:0,153,2108	1/1:4,7:11:26.36:288,26,0	1/1:3,24:26:75.90:811,76,0	1/1:5,15:21:37.41:522,37,0	1/1:2,13:15:26.60:291,27,0	1/1:1,22:24:62.13:669,62,0	0/0:15,0:15:44.46:0,44,567	0/0:20,0:20:60.19:0,60,823	0/0:13,0:13:35.39:0,35,228	1/1:7,17:24:25.45:528,25,0	1/1:0,10:10:21.06:233,21,0	0/0:25,0:25:68.25:0,68,851	0/0:30,0:30:90.02:0,90,1146	0/0:18,0:18:54.04:0,54,684	1/1:12,8:20:21.43:306,21,0	1/1:1,14:14:30.03:329,30,0	1/1:2,5:7:18.48:188,18,0	1/1:3,13:16:25.31:258,25,0	1/1:1,22:23:61.43:682,61,0	0/0:26,0:26:74.65:0,75,899	1/1:1,13:14:24.15:383,24,0
chr10	47985672	.	T	TA	7196.55	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=15.108;DP=538;FS=9.451;HRun=0;HaplotypeScore=107.1508;InbreedingCoeff=0.9922;MQ=74.71;MQ0=0;MQRankSum=-4.330;QD=24.56;ReadPosRankSum=3.510;VQSLOD=5.5709;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:32,0:32:62.41:710,62,0	0/0:5,0:5:15.04:0,15,194	0/0:10,0:10:24.24:0,24,287	0/0:19,0:19:46.52:0,47,575	1/1:22,0:22:35.79:473,36,0	0/0:21,0:21:63.20:0,63,864	0/0:8,0:8:24.08:0,24,335	0/0:50,0:50:99:0,150,2082	1/1:10,0:10:23.33:292,23,0	1/1:27,0:26:72.78:844,73,0	1/1:21,0:21:42:543,42,0	1/1:17,0:17:26.01:306,26,0	1/1:24,0:24:60.32:703,60,0	0/0:15,0:15:41.57:0,42,232	0/0:20,0:20:60.19:0,60,822	1/1:2,11:13:26.60:302,27,0	1/1:24,0:24:29.48:563,29,0	1/1:10,0:10:21.06:238,21,0	0/0:24,0:24:55.09:0,55,259	0/0:30,0:30:53.89:0,54,394	0/0:18,0:18:44.33:0,44,237	1/1:19,0:19:15:326,15,0	1/1:15,0:14:33.04:363,33,0	1/1:7,0:7:17.99:190,18,0	1/1:15,0:15:27.24:286,27,0	1/1:22,0:22:53.84:663,54,0	0/0:25,0:25:62.18:0,62,329	1/1:15,0:15:26.98:395,27,0
chr10	47986255	.	CA	C	7068.06	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=10.788;DP=529;FS=15.763;HRun=8;HaplotypeScore=53.0393;InbreedingCoeff=0.9676;MQ=87.13;MQ0=0;MQRankSum=-3.887;QD=24.37;ReadPosRankSum=5.106;VQSLOD=3.7247;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,16:19:45.07:435,45,0	0/0:10,0:10:30.09:0,30,362	0/0:21,0:21:51.03:0,51,548	0/0:15,1:17:1.12:0,1,284	1/1:3,26:29:66.09:637,66,0	0/0:20,0:20:57.16:0,57,677	0/0:15,0:15:33.10:0,33,399	0/0:34,0:34:93.26:0,93,1095	1/1:2,16:18:48.07:464,48,0	1/1:3,20:23:60.09:579,60,0	1/1:2,17:19:48.07:463,48,0	1/1:2,12:14:33.05:319,33,0	1/1:1,17:18:51.08:492,51,0	0/0:17,0:17:42.10:0,42,474	0/0:24,0:24:60.18:0,60,725	1/1:2,14:16:42.07:406,42,0	1/1:1,18:19:48.08:464,48,0	1/1:0,16:16:42.06:406,42,0	0/0:14,0:14:39.12:0,39,471	0/0:28,0:28:75.23:0,75,906	0/0:14,0:14:39.12:0,39,471	1/1:0,18:18:51.08:492,51,0	1/1:2,9:11:27.04:261,27,0	1/1:1,11:12:30:290,30,0	1/1:3,14:17:42.06:405,42,0	1/1:1,22:23:66.10:637,66,0	0/0:25,0:25:63.19:0,63,759	1/1:5,13:18:33.05:319,33,0
chr10	47987071	.	T	TG	18157.30	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-0.604;DP=502;FS=0.000;HRun=1;HaplotypeScore=61.1531;InbreedingCoeff=0.9666;MQ=75.55;MQ0=0;MQRankSum=-3.589;QD=41.27;ReadPosRankSum=2.007;VQSLOD=5.3410;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,8:9:21.07:315,21,0	0/0:4,0:4:9.03:0,9,117	0/0:13,0:13:39.13:0,39,502	0/0:5,0:5:11.55:0,12,148	1/1:0,33:34:99:1463,99,0	0/0:16,0:16:48.15:0,48,609	0/0:6,0:6:18.06:0,18,233	1/1:0,37:37:99:1642,111,0	1/1:1,15:16:42.14:629,42,0	1/1:2,25:27:75.25:1124,75,0	1/1:0,30:30:90.29:1329,90,0	1/1:0,16:16:42.14:630,42,0	1/1:0,15:15:42.14:630,42,0	1/1:0,17:17:42.14:630,42,0	0/0:18,0:18:51.17:0,51,662	1/1:1,12:13:30.10:450,30,0	1/1:0,17:17:51.17:764,51,0	1/1:1,17:19:54.18:797,54,0	1/1:2,23:25:53.15:973,53,0	1/1:1,31:32:90.26:1324,90,0	1/1:0,4:4:9.03:135,9,0	1/1:0,14:14:39.13:585,39,0	1/1:1,18:19:51.17:764,51,0	1/1:0,12:12:36.12:540,36,0	1/1:1,11:12:33.11:495,33,0	1/1:2,30:32:93.25:1347,93,0	1/1:1,27:28:78.09:1169,78,0	1/1:2,10:12:30.06:425,30,0
chr10	47987683	.	C	CA	509.03	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-4.657;DP=700;FS=1.998;HRun=6;HaplotypeScore=68.3952;InbreedingCoeff=0.9989;MQ=85.96;MQ0=0;MQRankSum=-1.814;QD=25.45;ReadPosRankSum=0.322;VQSLOD=3.8532;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:96.19:0,96,973	0/0:15,0:15:42.10:0,42,429	0/0:32,0:32:79.64:0,80,773	0/0:25,0:25:40.16:0,40,474	0/0:34,0:34:96.15:0,96,967	0/0:38,0:38:99:0,102,1031	0/0:28,0:28:75.17:0,75,765	0/0:31,0:31:81.11:0,81,809	0/0:19,0:19:57.13:0,57,582	0/0:27,0:27:72.15:0,72,730	0/0:26,0:26:66.14:0,66,673	0/0:20,0:20:60.14:0,60,611	0/0:23,0:23:63.14:0,63,643	0/0:24,0:24:66.15:0,66,673	0/0:26,0:26:72.16:0,72,735	1/1:1,19:20:48.15:604,48,0	0/0:12,0:12:30.04:0,30,298	0/0:18,0:18:48.11:0,48,490	0/0:13,0:13:30.06:0,30,306	0/0:32,0:32:87.19:0,87,888	0/0:36,0:36:90.18:0,90,911	0/0:24,0:24:63.12:0,63,636	0/0:25,0:25:75.17:0,75,765	0/0:20,0:20:57.09:0,57,571	0/0:21,0:21:57.13:0,57,581	0/0:27,0:27:78.18:0,78,796	0/0:30,0:29:87.20:0,87,887	0/0:16,0:16:48.11:0,48,489
chr10	47988119	.	A	AGATT	783.61	PASS	AB=0.786;AC=14;AF=0.250;AN=56;BaseQRankSum=-1.189;DP=299;FS=0.886;HRun=0;HaplotypeScore=53.2689;InbreedingCoeff=0.7352;MQ=67.35;MQ0=1;MQRankSum=2.030;QD=15.36;ReadPosRankSum=0.315;VQSLOD=2.7016;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:41.87:0,42,334	0/0:5,0:5:14.93:0,15,120	0/0:7,0:7:11.95:0,12,114	0/1:3,0:3:0.81:1,0,30	0/0:13,0:13:26.98:0,27,235	0/0:14,0:14:42.08:0,42,604	0/0:1,0:1:2.99:0,3,24	0/0:29,0:27:62.93:0,63,545	1/1:0,4:4:3.01:80,3,0	0/0:12,0:12:30.05:0,30,301	0/0:12,0:12:29.75:0,30,252	1/1:6,0:6:14.99:149,15,0	1/1:4,6:10:9.03:240,9,0	0/0:10,0:10:24.01:0,24,264	0/0:10,0:10:24.02:0,24,245	0/1:2,6:7:20.97:74,0,21	0/0:18,0:17:32.30:0,32,253	0/0:14,0:14:35.94:0,36,317	0/0:14,0:13:35.97:0,36,313	0/0:7,0:7:21:0,21,235	0/0:11,0:11:26.97:0,27,280	1/1:9,0:9:20.99:214,21,0	1/1:8,0:8:17.98:149,18,0	1/1:3,0:3:5.99:49,6,0	0/0:13,0:13:35.90:0,36,318	0/0:11,0:11:32.98:0,33,301	0/0:12,0:12:32.90:0,33,356	0/0:18,0:18:44.77:0,45,391
chr10	47988120	.	GATTTATTT	G	1075.72	PASS	AB=0.824;AC=17;AF=0.370;AN=46;BaseQRankSum=3.424;DP=289;FS=1.128;HRun=0;HaplotypeScore=72.2533;InbreedingCoeff=0.5231;MQ=67.64;MQ0=1;MQRankSum=-5.728;QD=8.61;ReadPosRankSum=-0.773;VQSLOD=1.6490;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:17:3.01:39,3,0	0/0:5,0:5:6.02:0,6,78	./.	./.	1/1:10,2:12:3.01:75,3,0	0/0:14,0:14:33.11:0,33,1254	./.	0/0:27,0:25:15.05:0,15,260	0/0:4,0:4:3.01:0,3,105	1/1:10,2:12:6.02:150,6,0	1/1:7,4:11:5.95:150,6,0	0/0:6,0:6:3.01:0,3,95	0/0:8,0:8:9.03:0,9,315	0/0:8,0:8:9.03:0,9,320	0/0:6,0:10:8.98:0,9,73	0/0:8,0:7:3.01:0,3,105	1/1:11,6:16:6.02:150,6,0	0/1:11,3:14:13.89:141,0,14	0/0:14,0:13:9.02:0,9,156	0/0:7,0:7:6.02:0,6,246	0/0:10,0:10:9.03:0,9,312	0/0:9,0:9:3.01:0,3,101	./.	./.	1/1:9,4:13:6.02:150,6,0	1/1:10,1:11:3.01:75,3,0	0/0:12,0:12:15.05:0,15,527	1/1:8,10:18:12.04:299,12,0
chr10	47988374	.	A	AT	383.17	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=-2.842;DP=430;FS=8.410;HRun=10;HaplotypeScore=45.4366;InbreedingCoeff=0.5978;MQ=81.41;MQ0=0;MQRankSum=0.016;QD=10.08;ReadPosRankSum=-0.162;VQSLOD=1.3896;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,20:25:26.73:475,27,0	0/0:5,0:5:14.98:0,15,123	0/1:11,0:13:8.76:9,0,91	0/0:13,0:14:26.61:0,27,219	0/0:8,0:8:23.97:0,24,197	0/0:15,0:14:44.93:0,45,366	0/0:21,0:21:59.88:0,60,483	0/0:21,0:21:50.91:0,51,419	0/0:26,0:26:62.91:0,63,517	0/0:6,0:6:11.97:0,12,99	0/0:14,0:14:41.94:0,42,342	0/0:15,1:16:9.91:0,10,284	0/0:14,0:14:19.23:0,19,276	0/0:22,0:22:53.89:0,54,440	0/0:15,0:16:37.99:0,38,301	0/0:9,0:9:20.93:0,21,167	0/0:26,0:26:71.90:0,72,591	0/0:20,0:20:50.93:0,51,418	0/0:10,0:12:33.82:0,34,257	0/0:13,0:13:32.94:0,33,268	0/0:16,0:16:41.94:0,42,345	0/0:4,0:5:11.02:0,11,80	0/0:9,0:9:17.96:0,18,148	0/0:27,0:27:65.88:0,66,542	0/0:10,0:10:23.96:0,24,197	0/0:17,0:17:47.93:0,48,394	0/0:23,0:23:62.86:0,63,510	0/0:7,0:7:14.98:0,15,123
chr10	47989073	.	TA	T	8079.57	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=13.812;DP=545;FS=5.161;HRun=8;HaplotypeScore=52.4552;InbreedingCoeff=0.9752;MQ=70.01;MQ0=0;MQRankSum=-1.195;QD=24.86;ReadPosRankSum=1.649;VQSLOD=5.7082;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,27:31:75.12:724,75,0	0/0:6,0:6:18.06:0,18,217	0/0:8,0:8:18.03:0,18,189	0/0:4,0:4:6.01:0,6,61	1/1:2,36:38:99:985,102,0	0/0:23,1:24:43.24:0,43,804	0/0:7,0:7:18.05:0,18,208	0/0:21,0:21:51.13:0,51,587	1/1:1,12:13:36.05:345,36,0	1/1:2,24:26:66.10:637,66,0	1/1:2,19:21:54.08:522,54,0	1/1:2,19:21:51.08:492,51,0	1/1:0,15:15:42.07:406,42,0	0/0:21,0:21:51.16:0,51,616	0/0:25,0:25:72.22:0,72,870	0/0:20,0:20:57.17:0,57,688	1/1:4,27:31:81.12:782,81,0	1/1:1,12:13:36.06:348,36,0	0/0:12,1:14:10.01:0,10,384	0/0:39,0:39:99:0,102,1232	0/0:10,0:10:27.08:0,27,316	1/1:2,20:22:54.08:521,54,0	1/1:1,19:20:54.09:522,54,0	1/1:0,13:13:33.05:319,33,0	1/1:1,19:20:54.09:522,54,0	1/1:1,27:28:75.11:724,75,0	0/0:21,0:21:60.18:0,60,725	1/1:2,11:13:24.03:232,24,0
chr10	47989770	.	C	CACA	365.17	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-1.682;DP=610;FS=2.695;HRun=0;HaplotypeScore=87.2562;InbreedingCoeff=0.9899;MQ=61.82;MQ0=4;MQRankSum=-0.194;QD=21.48;ReadPosRankSum=0.890;VQSLOD=3.3472;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,105,1204	0/0:12,0:12:30.07:0,30,389	0/0:30,0:24:24.05:0,24,296	0/0:29,0:24:41.92:0,42,442	0/0:26,0:26:63.05:0,63,755	0/0:16,0:16:36.09:0,36,478	0/0:18,0:18:39.06:0,39,463	0/0:23,0:22:45.04:0,45,415	0/0:22,0:22:60.15:0,60,811	0/0:21,0:21:54.12:0,54,610	0/0:27,0:27:59.78:0,60,689	0/0:20,0:20:36.02:0,36,449	0/0:21,0:21:57.17:0,57,806	0/0:26,0:26:72.13:0,72,925	0/0:24,0:24:66.17:0,66,897	1/1:2,15:17:24.05:458,24,0	0/0:24,0:23:56.82:0,57,741	0/0:24,0:24:65.91:0,66,765	0/0:12,0:12:27:0,27,303	0/0:27,0:27:68.78:0,69,673	0/0:22,0:22:50.99:0,51,605	0/0:16,0:16:45.01:0,45,458	0/0:19,0:19:54.02:0,54,615	0/0:18,0:18:48.14:0,48,674	0/0:23,0:23:57.14:0,57,752	0/0:24,0:24:54.08:0,54,582	0/0:22,0:22:60.09:0,60,751	0/0:7,0:7:20.99:0,21,211
chr10	47990213	.	T	TAAAA	9552.72	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=4.957;DP=386;FS=9.403;HRun=3;HaplotypeScore=110.7070;InbreedingCoeff=0.9528;MQ=47.25;MQ0=15;MQRankSum=-11.081;QD=47.53;ReadPosRankSum=1.863;VQSLOD=2.5982;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:22,2:22:60.18:1081,60,0	0/0:9,0:9:27.09:0,27,466	0/0:27,0:5:11.96:0,12,121	0/0:18,0:6:12.49:0,12,155	1/1:13,1:14:42.14:767,42,0	0/0:13,0:13:30.10:0,30,491	0/0:9,0:9:21.07:0,21,346	0/0:29,0:26:54.18:0,54,914	1/1:6,1:7:21.07:377,21,0	1/1:19,1:19:49.75:906,50,0	1/1:21,1:21:57.19:996,57,0	1/1:4,1:4:9.03:169,9,0	1/1:5,0:5:15.05:243,15,0	0/0:5,0:5:14.90:0,15,113	0/0:12,0:11:24.01:0,24,361	0/0:6,0:6:12.04:0,12,192	1/1:17,3:20:54.18:1022,54,0	1/1:8,5:12:33.11:711,33,0	0/0:23,0:20:53.04:0,53,370	0/0:14,0:14:26.32:0,26,201	0/0:5,0:5:11.98:0,12,99	1/1:8,0:8:24.08:415,24,0	1/1:8,2:9:21.07:400,21,0	1/1:6,0:5:6.02:100,6,0	1/1:21,5:25:72.25:1377,72,0	1/1:7,1:7:18.06:331,18,0	0/0:15,0:14:40.12:0,40,330	1/1:9,3:12:36.07:657,36,0
chr10	47990216	.	ATTT	A	4259.67	PASS	AB=0.638;AC=40;AF=0.714;AN=56;BaseQRankSum=8.393;DP=365;FS=0.000;HRun=17;HaplotypeScore=116.4132;InbreedingCoeff=0.5864;MQ=46.57;MQ0=21;MQRankSum=-7.172;QD=15.16;ReadPosRankSum=4.064;VQSLOD=3.2017;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,14:20:39.78:390,40,0	0/0:7,0:9:22.27:0,22,309	0/0:27,0:5:5.19:0,5,62	0/0:18,0:6:7.56:0,8,65	1/1:2,11:13:32.32:337,32,0	0/0:3,0:12:20.94:0,21,178	0/0:2,0:8:20.96:0,21,202	0/1:13,1:23:12.81:13,0,47	1/1:2,5:7:14.57:153,15,0	1/1:6,14:18:44.05:458,44,0	1/1:2,17:18:47.69:491,48,0	1/1:2,2:3:5.66:61,6,0	1/1:0,5:5:15.03:154,15,0	0/1:1,0:5:7.09:9,0,7	0/0:8,0:9:18.03:0,18,252	1/1:0,6:6:12.03:123,12,0	1/1:5,13:18:37.68:414,38,0	1/1:8,4:11:16.05:194,16,0	1/1:10,2:20:18.72:137,19,0	0/1:9,0:14:9.52:10,0,61	1/1:1,0:4:5.75:17,6,0	1/1:0,6:6:18.04:184,18,0	1/1:2,6:7:14.27:152,14,0	1/1:1,4:4:6.01:62,6,0	1/1:9,16:24:48.63:517,49,0	1/1:3,4:5:11.60:122,12,0	0/1:6,1:15:8.64:50,0,9	1/1:6,7:12:19.78:212,20,0
chr10	47992008	.	CA	C	629.18	PASS	AB=0.861;AC=12;AF=0.214;AN=56;BaseQRankSum=-7.087;DP=479;FS=17.360;HRun=13;HaplotypeScore=120.4023;InbreedingCoeff=0.4806;MQ=73.59;MQ0=5;MQRankSum=3.972;QD=3.86;ReadPosRankSum=3.483;VQSLOD=0.3738;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:13:19.36:0,19,89	1/1:4,5:9:14.89:107,15,0	0/1:31,2:14:27.17:27,0,53	0/1:37,1:15:5.47:5,0,66	0/0:17,0:20:22.76:0,23,115	1/1:5,13:19:34.76:246,35,0	0/1:4,6:10:8.30:110,0,8	0/1:16,2:18:10.53:11,0,226	0/0:8,0:8:10.74:0,11,49	0/0:23,0:26:41.35:0,41,211	0/0:27,0:28:46.63:0,47,247	0/0:6,0:7:7.03:0,7,35	0/0:4,0:5:8.68:0,9,49	0/0:10,0:16:34.71:0,35,203	1/1:8,8:16:16.81:115,17,0	1/1:14,6:20:0.51:167,1,0	0/0:8,0:9:14.35:0,14,77	0/0:9,1:11:22.62:0,23,116	0/0:13,0:14:22.85:0,23,150	0/0:23,0:30:59.22:0,59,348	0/0:5,0:7:12.13:0,12,69	0/0:18,0:19:16.35:0,16,71	0/0:15,0:16:15.28:0,15,74	0/0:4,0:4:2.84:0,3,14	0/0:16,0:16:22.95:0,23,124	0/0:18,0:22:33.72:0,34,161	0/0:15,0:27:68:0,68,371	0/0:10,0:12:29.64:0,30,167
chr10	47992016	.	A	AAAAAAAC	9600.85	PASS	AB=0.997;AC=37;AF=0.661;AN=56;BaseQRankSum=-5.135;DP=605;FS=1.347;HRun=0;HaplotypeScore=161.9881;InbreedingCoeff=0.4146;MQ=66.28;MQ0=8;MQRankSum=-3.915;QD=19.09;ReadPosRankSum=3.171;VQSLOD=4.3994;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:13:22.39:117,22,0	0/0:7,0:7:14.06:0,14,188	0/1:40,0:14:8.17:8,0,104	0/1:48,0:20:2.43:2,0,96	1/1:6,24:34:38.46:764,38,0	0/0:23,0:23:55.37:0,55,753	0/0:8,0:8:17.56:0,18,261	0/0:28,0:28:58.59:0,59,734	1/1:4,9:14:12.03:343,12,0	1/1:8,18:36:66.80:1223,67,0	1/1:7,26:33:46.43:1317,46,0	1/1:3,12:15:8.98:179,9,0	1/1:2,13:19:6.47:173,6,0	0/1:15,0:14:21.42:127,0,21	0/0:18,0:18:40.77:0,41,460	0/0:18,0:18:50.06:0,50,592	1/1:5,6:14:2.77:408,3,0	1/1:13,1:13:30.41:592,30,0	0/1:14,0:13:23.90:24,0,94	0/1:28,0:28:63.05:63,0,210	0/1:7,0:7:28.42:28,0,53	1/1:4,19:27:21.23:488,21,0	1/1:4,23:28:23.96:658,24,0	1/1:0,6:6:3.01:108,3,0	1/1:2,11:19:21.07:689,21,0	1/1:8,16:27:38.15:1266,38,0	0/1:31,0:29:99:212,0,104	1/1:17,0:17:36.03:811,36,0
chr10	47992017	.	A	AAAAC	1794.48	PASS	AB=0.996;AC=20;AF=0.357;AN=56;BaseQRankSum=3.900;DP=607;FS=4.252;HRun=0;HaplotypeScore=145.6646;InbreedingCoeff=-0.0865;MQ=66.81;MQ0=8;MQRankSum=-5.573;QD=4.50;ReadPosRankSum=7.119;VQSLOD=1.9167;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:4,9:13:3.96:414,4,0	0/0:6,0:6:14.71:0,15,129	0/1:41,0:15:21.47:21,0,105	0/1:50,0:21:1.47:1,0,105	0/1:30,0:31:65.47:139,0,65	0/0:23,0:23:50.20:0,50,506	0/1:9,0:9:0.98:1,0,160	0/0:28,0:28:71.05:0,71,771	0/1:14,0:14:30.74:47,0,31	0/1:33,0:33:99:219,0,170	0/1:34,0:34:66.63:261,0,67	1/1:15,0:15:3.35:29,3,0	0/1:19,0:19:11.24:58,0,11	0/0:15,0:14:36.25:0,36,205	0/0:19,0:19:34.85:0,35,365	0/0:19,0:19:29.14:0,29,460	0/1:13,0:13:12.44:100,0,12	0/1:17,0:15:24.25:24,0,112	0/0:14,0:13:30.75:0,31,222	0/0:29,0:29:65.30:0,65,410	0/0:7,0:7:14.24:0,14,96	0/1:28,0:27:53.30:93,0,53	0/1:29,0:28:43.33:87,0,43	1/1:6,0:6:3:29,3,0	0/1:19,0:19:1.14:171,0,1	0/1:27,0:27:99:260,0,162	0/0:31,0:29:75.44:0,75,486	0/0:16,0:17:35.71:0,36,243
chr10	47992033	.	C	CAA	2905.40	PASS	AB=0.942;AC=16;AF=0.286;AN=56;BaseQRankSum=3.674;DP=629;FS=4.267;HRun=10;HaplotypeScore=122.5450;InbreedingCoeff=0.6786;MQ=63.09;MQ0=10;MQRankSum=-4.917;QD=15.05;ReadPosRankSum=0.730;VQSLOD=1.9783;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:24:0,24,233	0/0:6,0:6:15.03:0,15,153	0/0:34,0:14:17.28:0,17,123	0/0:53,0:21:21.18:0,21,172	0/0:32,0:32:17.15:0,17,357	0/0:22,0:22:48.08:0,48,488	0/0:10,0:10:21.03:0,21,210	1/1:14,0:33:26.91:201,27,0	0/0:16,0:16:11.04:0,11,153	0/0:29,0:30:35.61:0,36,460	0/0:32,0:32:53.98:0,54,432	0/1:14,0:14:12.15:12,0,24	0/0:23,0:23:6.08:0,6,132	1/1:12,5:16:45:578,45,0	0/0:23,0:24:44.79:0,45,499	0/0:18,0:18:24.36:0,24,134	0/1:17,0:18:2:2,0,164	0/0:17,0:16:9.05:0,9,252	1/1:11,6:17:33.98:434,34,0	1/1:16,15:32:73.84:871,74,0	1/1:1,5:6:12.04:178,12,0	0/0:28,0:27:36.32:0,36,362	0/0:29,0:31:20.03:0,20,320	0/1:6,0:7:0.27:0,0,42	0/0:19,0:20:27.58:0,28,245	0/0:23,0:23:36.58:0,37,360	1/1:23,6:29:74.13:797,74,0	0/1:15,0:17:18.64:19,0,182
chr10	47992042	.	AAC	A	552.81	PASS	AB=0.968;AC=7;AF=0.125;AN=56;BaseQRankSum=1.153;DP=615;FS=0.531;HRun=0;HaplotypeScore=125.3292;InbreedingCoeff=0.2857;MQ=64.41;MQ0=8;MQRankSum=0.223;QD=4.32;ReadPosRankSum=-4.958;VQSLOD=1.0644;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:30.08:0,30,493	0/0:5,0:5:15.05:0,15,279	0/0:32,0:15:11.81:0,12,282	0/0:47,0:20:42.48:0,42,446	0/0:28,0:28:42.37:0,42,799	0/0:21,0:21:57.16:0,57,966	0/0:9,0:9:24.07:0,24,396	0/0:31,0:31:81.84:0,82,885	0/0:14,0:14:26.08:0,26,386	0/0:33,0:33:75.56:0,76,1210	0/0:29,0:29:65.99:0,66,1108	0/0:13,0:13:6.47:0,6,81	0/0:22,0:22:20.59:0,21,378	0/1:18,0:17:27.92:42,0,28	0/0:26,0:26:66.14:0,66,1061	1/1:16,1:17:25.94:127,26,0	0/0:21,0:21:45.67:0,46,608	0/0:16,0:14:42.10:0,42,661	0/1:17,3:19:13.79:154,0,14	0/1:30,1:31:55.36:147,0,55	0/1:7,0:7:0.50:38,0,1	0/0:25,0:24:38.55:0,39,723	0/0:32,0:31:47.07:0,47,794	0/0:9,0:9:14.99:0,15,191	0/0:21,0:21:45.14:0,45,782	0/0:24,0:24:59.43:0,59,914	0/1:35,0:34:92.43:180,0,92	0/0:14,0:15:34.40:0,34,524
chr10	47992043	.	AC	A	1752.20	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=5.535;DP=598;FS=1.280;HRun=2;HaplotypeScore=110.3019;InbreedingCoeff=0.9509;MQ=65.92;MQ0=7;MQRankSum=-4.621;QD=14.13;ReadPosRankSum=-0.537;VQSLOD=2.8948;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:27.95:0,28,338	0/0:5,0:5:15.05:0,15,204	0/0:31,0:16:10.57:0,11,280	0/0:47,0:20:27.53:0,28,332	0/0:27,0:27:32.75:0,33,548	0/0:21,0:21:57.14:0,57,704	0/0:9,0:9:22.88:0,23,275	0/0:27,0:27:77.62:0,78,607	0/0:11,0:11:24.05:0,24,291	0/0:32,0:32:68.56:0,69,891	0/0:29,0:29:63.11:0,63,796	0/0:12,0:12:4.19:0,4,62	0/0:20,0:20:21.06:0,21,273	1/1:17,0:17:36.70:185,37,0	0/0:25,0:25:62.80:0,63,756	1/1:5,12:17:50.41:567,50,0	0/0:21,0:21:47:0,47,484	0/0:16,0:14:39.04:0,39,459	1/1:16,1:18:47.31:297,47,0	1/1:29,1:30:67.87:351,68,0	1/1:7,0:7:16.14:88,16,0	0/0:25,0:24:36.31:0,36,524	0/0:33,0:32:46.71:0,47,602	0/0:9,0:9:14.96:0,15,147	0/0:20,0:20:48.11:0,48,595	0/0:24,0:24:59.28:0,59,667	1/1:31,1:32:71.06:449,71,0	0/0:15,0:15:19.28:0,19,361
chr10	47992713	.	AC	A	4560.48	PASS	AB=0.859;AC=26;AF=0.464;AN=56;BaseQRankSum=5.745;DP=472;FS=9.869;HRun=2;HaplotypeScore=65.7107;InbreedingCoeff=0.6862;MQ=51.41;MQ0=18;MQRankSum=1.164;QD=16.29;ReadPosRankSum=-0.453;VQSLOD=3.6006;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:26,2:26:22.18:208,22,0	0/0:12,0:12:35.99:0,36,415	0/0:4,0:1:1.55:0,2,4	0/1:4,1:2:0.51:14,0,1	1/1:28,0:27:15.80:331,16,0	0/0:17,0:15:42.04:0,42,546	0/0:14,0:12:35.10:0,35,456	0/0:20,0:19:46.34:0,46,432	1/1:0,8:9:15.05:189,15,0	1/1:18,2:19:51.76:441,52,0	0/1:16,0:15:5.55:179,0,6	1/1:16,3:19:46.65:447,47,0	1/1:9,2:12:24.93:246,25,0	0/0:17,0:16:30.91:0,31,317	0/0:17,0:16:29.89:0,30,338	0/0:15,0:15:19.37:0,19,68	1/1:22,1:23:49.58:469,50,0	0/1:11,1:13:1.66:176,0,2	0/0:22,0:21:17.78:0,18,366	0/0:29,0:28:64.39:0,64,623	0/0:8,0:7:17.96:0,18,193	1/1:5,18:22:41:427,41,0	0/1:2,16:17:4.52:284,0,5	0/1:11,1:12:1.08:186,0,1	1/1:17,0:16:44.69:357,45,0	0/1:15,0:14:4.70:266,0,5	0/0:17,0:17:45.06:0,45,470	1/1:17,1:15:36.02:340,36,0
chr10	47992715	.	C	CA	1020.34	PASS	AB=0.832;AC=12;AF=0.214;AN=56;BaseQRankSum=-7.438;DP=480;FS=6.975;HRun=14;HaplotypeScore=80.9070;InbreedingCoeff=0.2907;MQ=51.88;MQ0=18;MQRankSum=0.954;QD=6.22;ReadPosRankSum=-2.018;VQSLOD=2.0934;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:28:11.50:0,11,92	0/1:11,1:12:21.07:21,0,92	0/0:5,0:2:0.86:0,1,2	0/0:5,0:2:5.88:0,6,35	0/0:28,0:26:8.38:0,8,78	0/1:17,2:17:14.33:14,0,169	0/0:13,0:12:28.58:0,29,179	1/1:13,8:20:14.43:171,14,0	0/0:9,0:9:12.08:0,12,41	0/0:20,0:19:22.07:0,22,74	0/0:16,0:15:17.06:0,17,61	0/1:22,0:22:41.39:41,0,60	0/0:16,0:15:9.61:0,10,54	0/1:9,7:15:13.56:131,0,14	0/0:15,0:16:27.61:0,28,165	0/0:1,0:14:24.44:0,24,70	0/0:23,0:23:32.94:0,33,103	0/0:13,0:13:12.68:0,13,39	0/1:13,7:19:21.20:214,0,21	1/1:13,14:28:25.35:312,25,0	0/1:5,3:7:26.53:41,0,27	0/0:24,0:23:32.36:0,32,114	0/0:19,0:18:23.55:0,24,89	0/0:12,0:12:0.22:0,0,24	0/0:18,0:16:19.88:0,20,66	0/0:14,0:13:22.73:0,23,78	1/1:6,10:17:29.63:238,30,0	0/0:18,0:15:25.24:0,25,80
chr10	47993295	.	AG	A	6643.74	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=5.028;DP=510;FS=33.038;HRun=9;HaplotypeScore=58.5468;InbreedingCoeff=0.9274;MQ=81.02;MQ0=5;MQRankSum=-1.012;QD=19.26;ReadPosRankSum=5.046;VQSLOD=3.2575;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,19:19:42.02:384,42,0	0/0:2,0:2:6.02:0,6,69	0/0:46,0:22:23.18:0,23,219	0/0:30,0:21:12.51:0,13,181	1/1:3,12:15:33.02:302,33,0	0/0:17,0:17:33.10:0,33,381	0/0:23,0:23:60.16:0,60,680	0/0:17,0:17:27.05:0,27,291	1/1:1,14:15:36.02:329,36,0	1/1:2,15:17:42.01:384,42,0	1/1:2,11:14:26.05:225,26,0	1/1:3,10:13:24.01:220,24,0	1/1:4,19:23:48.01:437,48,0	1/1:1,14:15:42.02:384,42,0	0/0:27,0:27:66.17:0,66,750	1/1:3,15:18:33.01:302,33,0	1/1:2,22:24:54.03:494,54,0	1/1:1,7:8:18.01:165,18,0	1/1:1,6:7:18.01:165,18,0	1/1:4,13:17:36.01:329,36,0	1/1:4,15:19:32.04:280,32,0	1/1:3,14:16:33.02:302,33,0	1/1:5,15:20:36.01:329,36,0	1/1:3,18:21:45.02:412,45,0	1/1:4,17:21:48.02:439,48,0	1/1:4,12:16:4.34:295,4,0	1/1:1,18:19:45.02:412,45,0	1/1:1,6:7:6:55,6,0
chr10	47993983	.	ACACACACACACACACGCACGCG	A	1984.47	PASS	AB=1.000;AC=25;AF=0.481;AN=52;BaseQRankSum=3.144;DP=467;FS=0.000;HRun=0;HaplotypeScore=173.1399;InbreedingCoeff=0.3873;MQ=40.46;MQ0=61;MQRankSum=-0.437;QD=6.84;ReadPosRankSum=-1.463;VQSLOD=2.4556;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:32,0:29:11:101,11,0	0/0:4,0:4:6.02:0,6,285	./.	./.	0/1:16,0:15:12.49:105,0,12	0/0:28,0:25:15.50:0,15,705	0/0:28,0:23:17.80:0,18,585	0/0:13,0:6:11.52:0,12,142	0/1:12,0:11:5.04:146,0,5	1/1:10,13:22:30.35:327,30,0	0/1:21,0:16:0.07:0,0,0	1/1:12,0:11:3.48:41,3,0	1/1:13,0:12:12.01:219,12,0	0/0:13,0:10:6.02:0,6,94	0/0:9,0:9:11.25:0,11,379	0/1:10,0:10:15.76:16,0,66	0/1:23,0:20:48.13:317,0,48	1/1:23,0:17:9.38:87,9,0	0/0:10,0:8:18.36:0,18,256	0/0:13,0:11:2.90:0,3,72	0/0:46,0:37:8.84:0,9,193	0/1:11,0:8:0:0,0,0	1/1:13,0:12:3.35:23,3,0	0/1:36,0:32:9.06:67,0,9	1/1:15,0:13:8.48:56,8,0	1/1:26,0:23:42.13:602,42,0	0/0:7,0:6:2.57:0,3,16	1/1:3,0:2:3.01:47,3,0
chr10	47993993	.	ACACACGCACGCG	A	2244.87	PASS	AB=0.960;AC=26;AF=0.500;AN=52;BaseQRankSum=4.467;DP=459;FS=2.118;HRun=0;HaplotypeScore=127.9372;InbreedingCoeff=0.3816;MQ=40.52;MQ0=60;MQRankSum=-1.607;QD=7.66;ReadPosRankSum=1.068;VQSLOD=1.8518;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:25:11:125,11,0	0/0:4,0:4:6.02:0,6,158	./.	./.	0/1:12,0:12:9.96:144,0,10	0/0:28,0:27:29.22:0,29,625	0/0:26,0:21:26.44:0,26,685	0/0:16,0:8:20.93:0,21,306	0/1:12,0:11:1.96:190,0,2	1/1:23,0:21:33.32:339,33,0	0/1:10,9:14:0.03:0,0,0	0/1:16,0:14:0.92:36,0,1	1/1:12,0:11:12.04:231,12,0	0/0:13,0:10:9.01:0,9,96	0/0:12,0:12:0.06:0,0,282	0/1:9,0:9:16:16,0,27	0/1:23,0:20:14.08:296,0,14	1/1:26,0:20:10.15:69,10,0	0/1:10,0:8:11.41:11,0,122	0/0:11,0:8:2.67:0,3,22	0/0:48,0:40:21.05:0,21,185	0/1:11,0:8:0:0,0,0	1/1:12,0:11:2.76:22,3,0	1/1:35,0:31:11.60:125,12,0	1/1:15,0:12:12.45:105,12,0	1/1:27,0:22:41.72:655,42,0	0/0:8,0:7:5.59:0,6,44	1/1:3,0:2:3.01:47,3,0
chr10	47993995	.	ACACGCACGCG	A	2372.12	PASS	AB=0.990;AC=26;AF=0.500;AN=52;BaseQRankSum=4.493;DP=461;FS=3.823;HRun=0;HaplotypeScore=119.8457;InbreedingCoeff=0.3911;MQ=40.59;MQ0=61;MQRankSum=-0.074;QD=7.96;ReadPosRankSum=1.213;VQSLOD=1.6406;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:25:11:125,11,0	0/0:5,0:5:9.03:0,9,208	./.	./.	0/1:12,0:12:9.96:144,0,10	0/0:28,0:27:31.95:0,32,620	0/0:26,0:21:29.31:0,29,756	0/0:18,0:9:23.94:0,24,349	0/1:11,1:11:1.96:190,0,2	1/1:23,0:21:33.80:339,34,0	0/1:17,0:12:0.05:0,0,0	0/1:16,0:14:1.21:35,0,1	1/1:12,1:12:12.04:205,12,0	0/0:13,0:10:9.01:0,9,96	0/0:11,0:11:0.06:0,0,282	0/1:9,0:9:16:16,0,27	0/1:25,0:21:11.11:314,0,11	1/1:12,14:20:10.15:69,10,0	0/1:11,0:9:18.19:18,0,152	0/0:10,0:8:2.67:0,3,22	0/0:46,0:38:21.17:0,21,194	0/1:11,0:8:0:0,0,0	1/1:13,0:12:2.65:22,3,0	1/1:35,1:32:14.74:153,15,0	1/1:17,0:14:18.89:189,19,0	1/1:25,1:21:35.48:673,35,0	0/0:6,0:5:5.60:0,6,45	1/1:3,0:2:3.01:47,3,0
chr10	47993997	.	ACGCACGCG	A	2429.71	PASS	AB=0.900;AC=26;AF=0.500;AN=52;BaseQRankSum=5.065;DP=463;FS=4.722;HRun=0;HaplotypeScore=110.9292;InbreedingCoeff=0.3936;MQ=40.49;MQ0=62;MQRankSum=-1.012;QD=8.21;ReadPosRankSum=2.028;VQSLOD=1.9499;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:25:11:125,11,0	0/0:5,0:5:9.03:0,9,206	./.	./.	0/1:13,0:13:9.96:144,0,10	0/0:27,0:26:16.95:0,17,630	0/0:28,0:23:35.33:0,35,867	0/0:21,0:12:29.98:0,30,463	0/1:12,0:11:1.96:190,0,2	1/1:22,0:21:33.80:339,34,0	0/1:16,0:11:0.04:0,0,0	0/1:5,11:14:1.82:35,0,2	1/1:3,10:12:12.04:256,12,0	0/0:13,0:10:9.01:0,9,96	0/0:11,0:11:0.06:0,0,282	0/1:8,0:8:16.11:16,0,27	0/1:25,0:21:11.11:314,0,11	1/1:26,0:20:10.15:69,10,0	0/1:11,0:9:43.33:43,0,153	0/0:11,0:8:2.57:0,3,22	0/0:43,0:36:20.69:0,21,164	0/1:4,7:8:0:0,0,0	1/1:5,8:12:2.64:22,3,0	1/1:36,0:32:15:154,15,0	1/1:14,0:13:18.89:191,19,0	1/1:26,0:21:35.12:647,35,0	0/0:7,0:5:5.58:0,6,42	1/1:3,0:2:5.23:53,5,0
chr10	47994001	.	ACG	A	1130.17	PASS	AB=0.948;AC=32;AF=0.640;AN=50;BaseQRankSum=5.259;DP=467;FS=7.496;HRun=0;HaplotypeScore=96.2209;InbreedingCoeff=-0.0018;MQ=41.33;MQ0=63;MQRankSum=-0.609;QD=2.94;ReadPosRankSum=0.930;VQSLOD=1.1605;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:24:13.71:14,0,36	0/1:5,0:5:8.96:9,0,100	./.	./.	0/1:10,3:13:11.10:62,0,11	0/1:26,0:25:4.14:4,0,466	0/0:28,0:23:41.75:0,42,610	0/0:23,0:14:32.69:0,33,460	0/1:14,0:13:35.97:36,0,66	1/1:22,0:20:1.61:161,2,0	1/1:17,0:12:2.74:14,3,0	1/1:14,1:13:3.01:42,3,0	1/1:13,0:12:11.82:76,12,0	0/1:13,0:10:16.25:20,0,16	0/1:12,0:12:1.19:1,0,278	0/0:11,0:11:5.60:0,6,35	0/1:13,13:22:21.19:142,0,21	1/1:23,0:18:7.17:41,7,0	0/1:13,0:10:15.76:105,0,16	0/0:11,0:8:2.82:0,3,18	1/1:42,0:35:18.93:98,19,0	./.	1/1:12,0:11:1.70:5,2,0	0/1:35,0:31:24.91:25,0,72	1/1:16,0:13:5.18:57,5,0	1/1:26,1:22:7.26:306,7,0	1/1:9,0:7:2.94:19,3,0	1/1:2,1:2:3.48:43,3,0
chr10	47994005	.	GCA	G	685.73	PASS	AB=0.984;AC=23;AF=0.479;AN=48;BaseQRankSum=2.686;DP=459;FS=1.479;HRun=0;HaplotypeScore=96.9147;InbreedingCoeff=0.1460;MQ=42.05;MQ0=60;MQRankSum=-1.296;QD=2.42;ReadPosRankSum=2.217;VQSLOD=1.9251;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,1:24:14.97:0,15,156	0/0:6,0:6:9.02:0,9,119	./.	./.	0/1:11,0:11:9.55:10,0,51	0/1:23,1:24:28.73:29,0,388	0/0:25,1:21:33.11:0,33,496	0/0:25,0:16:36.07:0,36,496	0/0:16,0:15:21.73:0,22,243	0/1:25,0:23:76.49:76,0,110	1/1:16,1:12:2.90:35,3,0	1/1:15,0:13:2.92:17,3,0	0/1:13,0:12:0:0,0,0	1/1:5,7:11:6.02:70,6,0	0/1:14,0:14:8.08:8,0,304	0/0:11,0:11:3:0,3,25	0/1:25,0:21:43.37:48,0,43	0/1:23,0:18:10.85:42,0,11	1/1:8,4:9:17.98:175,18,0	./.	1/1:20,19:32:14.28:175,14,0	./.	0/0:12,0:11:5.74:0,6,36	0/0:33,0:29:4.60:0,5,211	0/1:13,1:12:1.56:2,0,75	0/1:27,0:22:96.59:97,0,109	1/1:1,6:5:3.01:35,3,0	1/1:3,0:2:2.87:17,3,0
chr10	47994029	.	ACG	A	506.53	PASS	AB=0.944;AC=15;AF=0.268;AN=56;BaseQRankSum=5.584;DP=478;FS=0.000;HRun=0;HaplotypeScore=90.4447;InbreedingCoeff=-0.0776;MQ=48.06;MQ0=29;MQRankSum=-3.622;QD=2.37;ReadPosRankSum=0.693;VQSLOD=1.4712;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,1:24:23.98:0,24,296	0/0:6,0:6:14.77:0,15,187	0/1:13,0:7:28.37:28,0,32	0/1:6,0:4:11.99:19,0,12	0/0:8,3:11:10.98:0,11,125	0/0:19,1:20:11.42:0,11,539	0/0:25,0:23:56.86:0,57,772	0/0:26,0:24:60.44:0,60,638	0/0:26,0:25:28.58:0,29,515	0/1:19,4:23:99:137,0,239	0/1:11,2:13:8.31:8,0,15	0/0:15,0:13:14.20:0,14,108	0/0:10,0:10:2.65:0,3,20	0/1:13,0:11:14.88:15,0,33	0/0:13,0:13:22.49:0,22,464	1/1:9,0:9:9.46:76,9,0	0/1:17,3:20:16.24:16,0,90	0/1:22,2:23:61.46:61,0,143	0/1:16,0:14:26.48:89,0,26	0/0:10,0:8:8.88:0,9,74	0/1:40,1:37:88.08:88,0,147	0/0:11,0:9:5.99:0,6,50	0/0:10,0:10:8.94:0,9,100	0/0:35,2:35:37.87:0,38,443	0/0:17,2:17:25.59:0,26,258	0/1:22,3:21:99:101,0,287	0/1:8,0:6:12.59:13,0,14	1/1:2,1:2:3.59:10,4,0
chr10	47994133	.	GA	G	4028.93	PASS	AB=0.726;AC=30;AF=0.536;AN=56;BaseQRankSum=1.177;DP=531;FS=1.697;HRun=13;HaplotypeScore=66.2961;InbreedingCoeff=0.6856;MQ=69.83;MQ0=2;MQRankSum=-0.997;QD=12.32;ReadPosRankSum=2.995;VQSLOD=3.8838;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,1:23:41.15:0,41,541	0/0:8,0:8:21.03:0,21,200	0/0:16,0:15:20.13:0,20,139	0/0:8,0:7:3:0,3,29	1/1:9,12:22:37.78:266,38,0	0/0:20,2:22:13.21:0,13,425	0/0:18,1:20:22.31:0,22,404	0/0:11,0:27:54.70:0,55,326	1/1:4,13:18:37.78:265,38,0	1/1:3,16:19:47.68:348,48,0	0/1:3,10:14:19.21:168,0,19	1/1:4,10:16:1.69:155,2,0	1/1:5,8:15:21.86:143,22,0	0/0:2,0:12:25.73:0,26,143	0/1:19,5:24:39.57:40,0,297	1/1:2,15:21:49.90:330,50,0	1/1:5,15:23:50.60:338,51,0	1/1:0,13:13:38.78:285,39,0	0/0:7,0:24:47.70:0,48,282	0/0:7,2:28:28.60:0,29,356	0/1:12,3:21:24.65:25,0,190	1/1:3,10:13:29.82:219,30,0	1/1:5,13:19:37.54:268,38,0	1/1:4,18:24:22.58:288,23,0	0/1:6,8:14:0.37:152,0,0	1/1:11,17:28:49.73:356,50,0	0/0:6,0:15:14.20:0,14,71	1/1:0,19:21:54.78:384,55,0
chr10	47994600	.	CCTCTCTCT	C	1329.68	PASS	AC=26;AF=0.565;AN=46;BaseQRankSum=2.146;DP=370;FS=2.866;HRun=0;HaplotypeScore=90.3126;InbreedingCoeff=0.7189;MQ=60.10;MQ0=12;MQRankSum=-0.037;QD=8.69;ReadPosRankSum=3.861;VQSLOD=1.6245;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:25:10.14:244,10,0	./.	./.	0/0:20,0:11:2.98:0,3,21	1/1:10,0:10:6.47:53,6,0	0/0:19,0:19:14.92:0,15,175	0/0:19,0:19:18.03:0,18,347	0/0:31,0:29:24.92:0,25,256	1/1:9,0:8:5.94:41,6,0	1/1:7,0:7:9.03:167,9,0	1/1:9,4:12:2.96:20,3,0	1/1:10,0:10:9.02:99,9,0	1/1:10,0:10:11.98:149,12,0	0/0:13,0:13:0.35:0,0,2	0/0:10,0:9:11.89:0,12,200	1/1:7,0:7:8.94:114,9,0	1/1:15,0:16:20.95:277,21,0	1/1:6,0:6:1.25:3,1,0	0/0:13,0:13:16.32:0,16,134	0/0:22,0:21:8.15:0,8,57	0/0:18,0:18:5.87:0,6,76	./.	./.	1/1:11,0:11:14.84:136,15,0	./.	1/1:9,0:9:11.99:148,12,0	0/0:18,0:17:11.55:0,12,92	1/1:19,0:17:3.01:49,3,0
chr10	47994637	.	TTC	T	450.99	PASS	AB=1.000;AC=28;AF=0.519;AN=54;BaseQRankSum=3.293;DP=370;FS=0.000;HRun=0;HaplotypeScore=80.3457;InbreedingCoeff=0.2507;MQ=48.52;MQ0=18;MQRankSum=0.085;QD=2.09;ReadPosRankSum=-0.074;VQSLOD=0.8459;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:30:24.25:0,24,203	1/1:2,0:2:0.98:3,1,0	./.	0/0:12,0:4:8.61:0,9,67	0/0:13,0:13:22.41:0,22,342	0/1:15,0:15:33.89:34,0,263	0/1:12,0:12:60.34:60,0,121	1/1:14,8:21:19.86:211,20,0	1/1:14,0:13:12.06:52,12,0	0/0:18,0:17:17.60:0,18,287	0/0:16,0:15:19.69:0,20,223	1/1:6,0:6:4.33:17,4,0	1/1:14,0:14:3.29:18,3,0	0/1:9,0:9:0:0,0,1	0/0:14,0:13:10.05:0,10,117	1/1:6,0:6:1.73:12,2,0	0/1:27,0:25:41.28:41,0,270	0/1:8,0:8:26.05:26,0,107	0/0:11,0:11:5.37:0,5,49	0/0:14,0:13:2.92:0,3,24	0/1:16,0:15:0.02:0,0,0	1/1:1,0:4:0.47:1,0,0	1/1:8,0:7:7.94:36,8,0	1/1:10,0:10:2.48:8,2,0	0/1:10,0:9:47.91:48,0,148	0/1:17,0:16:37.55:38,0,329	1/1:16,0:14:0.96:3,1,0	0/0:17,1:16:20.84:0,21,333
chr10	47994699	.	CTGTA	C	2025.44	PASS	AC=10;AF=0.185;AN=54;BaseQRankSum=-0.958;DP=409;FS=22.841;HRun=0;HaplotypeScore=107.2873;InbreedingCoeff=0.7941;MQ=57.83;MQ0=2;MQRankSum=2.654;QD=28.53;ReadPosRankSum=0.159;VQSLOD=1.6056;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:8.58:0,9,155	0/0:4,0:4:12.01:0,12,194	./.	0/0:8,0:5:2.92:0,3,17	0/0:26,0:26:23.68:0,24,247	0/0:29,0:29:66.18:0,66,1456	0/0:12,0:12:27.06:0,27,556	0/0:35,0:35:71.67:0,72,744	0/0:12,0:12:21.05:0,21,392	0/0:21,0:21:41.84:0,42,519	0/0:9,0:9:11.92:0,12,101	0/0:5,0:5:9.01:0,9,127	0/0:11,0:11:6.02:0,6,104	1/1:1,12:13:30.10:488,30,0	0/0:21,0:21:54.11:0,54,1069	0/0:10,0:10:18.03:0,18,299	0/0:22,0:22:26.41:0,26,278	0/0:6,0:6:5.98:0,6,67	1/1:6,10:16:30.06:398,30,0	1/1:5,17:22:51.11:774,51,0	1/1:1,8:9:18.06:293,18,0	0/0:4,0:4:6:0,6,92	0/0:9,0:9:8.92:0,9,119	0/0:3,0:3:2.42:0,2,23	0/0:21,0:20:12.02:0,12,179	0/0:15,0:15:38.81:0,39,411	1/1:2,9:11:15.05:241,15,0	0/0:26,0:26:59.76:0,60,772
chr10	47994725	.	G	GTATGTATGTATTTATTTATT	10614.51	PASS	AC=32;AF=0.615;AN=52;BaseQRankSum=0.469;DP=425;FS=35.824;HRun=0;HaplotypeScore=183.5248;InbreedingCoeff=0.9242;MQ=55.68;MQ0=3;MQRankSum=-5.963;QD=44.60;ReadPosRankSum=-2.560;VQSLOD=2.6309;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,0:24:17.81:120,18,0	0/0:8,0:8:24.07:0,24,664	./.	./.	1/1:0,21:30:26.99:798,27,0	0/0:22,0:22:65.89:0,66,3122	0/0:13,0:13:39.13:0,39,1429	0/0:37,0:36:99:0,105,1816	1/1:10,0:10:30.07:426,30,0	1/1:1,12:18:42.61:1983,43,0	1/1:7,0:7:21.07:363,21,0	1/1:2,0:9:9.03:417,9,0	1/1:1,0:15:6.02:375,6,0	0/0:12,0:12:30.10:0,30,1475	0/0:21,0:21:60.20:0,60,2501	1/1:10,0:10:5.06:224,5,0	1/1:23,0:23:60.06:1230,60,0	1/1:6,0:6:15.05:273,15,0	0/0:17,0:17:48.03:0,48,1385	0/0:23,0:23:66.23:0,66,2581	0/0:13,0:13:33.10:0,33,1118	1/1:5,0:5:12.03:142,12,0	1/1:0,0:10:9.57:408,10,0	1/1:4,0:4:12.02:127,12,0	1/1:2,18:23:9.03:762,9,0	1/1:1,9:17:41.86:1999,42,0	0/0:11,0:11:21.07:0,21,791	1/1:26,0:26:66.13:967,66,0
chr10	47995136	.	TA	T	12845.51	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=7.261;DP=564;FS=0.958;HRun=7;HaplotypeScore=56.1419;InbreedingCoeff=0.9952;MQ=81.11;MQ0=0;MQRankSum=-4.537;QD=27.10;ReadPosRankSum=3.401;VQSLOD=5.4936;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,28:30:69.15:704,69,0	0/0:7,0:7:21.07:0,21,264	0/0:18,0:18:36.62:0,37,545	0/0:13,0:13:29.92:0,30,346	1/1:5,26:31:78.17:796,78,0	0/0:23,0:23:57.17:0,57,703	0/0:9,0:9:15.04:0,15,176	1/1:0,26:26:75.16:762,75,0	1/1:0,20:20:57.13:582,57,0	1/1:1,29:31:87.18:880,87,0	1/1:3,19:22:54.11:551,54,0	1/1:1,14:15:39.09:398,39,0	1/1:0,21:21:51.12:520,51,0	1/1:2,20:22:60.13:612,60,0	0/0:20,0:20:57.18:0,57,717	1/1:0,19:19:48.11:490,48,0	1/1:0,12:12:36.08:367,36,0	1/1:1,10:11:30.07:306,30,0	1/1:2,16:18:48.11:490,48,0	1/1:2,32:34:96.22:980,96,0	1/1:1,15:16:36.08:367,36,0	1/1:2,16:18:48.11:490,48,0	1/1:0,24:24:66.15:673,66,0	1/1:0,12:11:33.08:337,33,0	1/1:1,8:9:24.05:245,24,0	1/1:2,20:22:60.14:612,60,0	1/1:2,32:34:87.20:888,87,0	1/1:0,27:27:78.18:796,78,0
chr10	47996208	.	CAT	C	12739.47	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=16.484;DP=713;FS=2.057;HRun=0;HaplotypeScore=87.8099;InbreedingCoeff=0.9998;MQ=54.98;MQ0=15;MQRankSum=3.183;QD=34.90;ReadPosRankSum=4.014;VQSLOD=7.3745;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,26:25:57.19:816,57,0	0/0:12,0:12:33.11:0,33,605	0/0:30,0:19:48.16:0,48,841	0/0:22,0:18:45.15:0,45,764	1/1:1,30:31:78.21:1080,78,0	0/0:27,0:27:75.26:0,75,1367	0/0:17,0:16:39.13:0,39,714	0/0:41,0:41:99:0,120,2036	1/1:2,41:42:99:1457,102,0	1/1:1,31:32:93.31:1331,93,0	1/1:2,15:17:38.93:504,39,0	1/1:2,29:30:72.24:1031,72,0	1/1:0,25:25:72.07:1019,72,0	0/0:32,0:32:90.31:0,90,1649	0/0:26,0:26:75.26:0,75,1375	0/0:24,1:25:29.27:0,29,1221	1/1:1,27:25:60.20:859,60,0	1/1:1,18:18:48.08:661,48,0	0/0:22,0:19:57.19:0,57,1021	0/0:33,0:33:81.27:0,81,1459	0/0:31,0:28:60.21:0,60,1096	1/1:3,14:16:39.13:558,39,0	1/1:0,18:18:48.16:674,48,0	1/1:0,17:17:42.14:601,42,0	1/1:2,14:16:39.13:558,39,0	1/1:2,25:26:69.23:988,69,0	0/0:30,0:30:90.31:0,90,1623	1/1:2,14:14:42.14:601,42,0
chr10	47996490	.	ACAGCTGCATATGTAG	A	21357.76	PASS	AB=0.969;AC=31;AF=0.554;AN=56;BaseQRankSum=16.168;DP=607;FS=0.718;HRun=0;HaplotypeScore=254.4819;InbreedingCoeff=0.8891;MQ=56.82;MQ0=4;MQRankSum=-16.965;QD=74.94;ReadPosRankSum=4.562;VQSLOD=4.0732;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:14,14:28:36.10:1473,36,0	0/0:8,0:8:24.08:0,24,1735	0/0:30,0:22:60.16:0,60,2740	0/0:25,0:19:54.15:0,54,2695	1/1:6,16:22:42.14:1789,42,0	0/0:30,0:30:87.30:0,87,6125	0/0:19,0:19:51.17:0,51,3057	0/0:44,0:44:99:0,126,8389	1/1:1,23:24:51.18:2274,51,0	1/1:4,19:23:57.18:2433,57,0	1/1:1,15:16:39.13:1736,39,0	1/1:3,22:25:51.13:2160,51,0	1/1:4,19:23:45.15:2006,45,0	0/0:26,0:26:72.25:0,72,5058	0/0:19,0:19:57.20:0,57,4077	0/1:30,1:31:43.49:43,0,5650	1/1:7,9:16:18.06:803,18,0	1/1:2,4:6:9.03:401,9,0	0/0:27,0:25:72.25:0,72,4790	0/0:27,0:27:78.27:0,78,4837	0/0:43,0:43:99:0,126,9228	1/1:0,14:14:27.09:1204,27,0	1/1:3,9:12:24.08:1007,24,0	1/1:4,7:11:6.02:259,6,0	1/1:1,8:9:24.08:1070,24,0	1/1:4,19:23:57.17:2431,57,0	0/0:24,0:23:54.19:0,54,3776	1/1:0,2:2:6.02:268,6,0
chr10	47998831	.	TACACATGG	T	13860.58	PASS	AB=0.595;AC=29;AF=0.518;AN=56;BaseQRankSum=16.570;DP=561;FS=3.768;HRun=0;HaplotypeScore=155.8103;InbreedingCoeff=0.8978;MQ=73.91;MQ0=0;MQRankSum=-16.730;QD=53.72;ReadPosRankSum=6.571;VQSLOD=4.4325;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,14:17:21.07:587,21,0	0/0:13,0:13:36.11:0,36,1476	0/0:23,0:23:57.19:0,57,2032	0/0:22,0:22:60.20:0,60,2183	1/1:4,14:18:24.55:672,25,0	0/0:32,0:32:90.29:0,90,3610	0/0:20,0:20:48.15:0,48,1915	0/0:30,0:30:84.25:0,84,3478	0/1:7,15:22:98.90:806,0,99	1/1:2,20:22:63.19:1694,63,0	1/1:3,16:19:36.05:1004,36,0	1/1:6,16:22:39.13:1090,39,0	1/1:2,12:14:33.11:923,33,0	0/0:25,0:25:72.25:0,72,3063	0/0:27,0:27:75.24:0,75,3147	0/0:16,0:16:42.14:0,42,1809	1/1:1,14:15:27.09:755,27,0	1/1:5,7:12:18.06:504,18,0	0/0:15,0:15:39.13:0,39,1657	0/0:21,0:21:63.22:0,63,2673	0/0:37,0:37:99:0,105,4268	1/1:2,14:16:39.13:1090,39,0	1/1:2,19:21:54.19:1510,54,0	1/1:1,5:6:6.02:168,6,0	1/1:5,20:25:39.13:1091,39,0	1/1:4,22:26:66.23:1800,66,0	0/0:22,0:20:66.23:0,66,2862	1/1:0,3:3:6.02:167,6,0
chr10	47999206	.	C	CAAAAACAAA	13008.72	PASS	AB=0.989;AC=34;AF=0.607;AN=56;BaseQRankSum=-6.999;DP=485;FS=1.586;HRun=0;HaplotypeScore=115.2323;InbreedingCoeff=0.7733;MQ=73.94;MQ0=7;MQRankSum=-9.243;QD=40.03;ReadPosRankSum=1.168;VQSLOD=4.8089;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,9:14:15.05:656,15,0	0/0:4,0:4:9.03:0,9,245	0/1:49,0:25:6.53:7,0,183	0/1:42,0:21:6.73:7,0,63	1/1:5,15:24:39.10:1257,39,0	0/0:14,0:14:42.13:0,42,928	0/0:8,0:8:21.05:0,21,506	0/0:34,0:34:51.16:0,51,1016	1/1:2,10:13:18.06:819,18,0	1/1:3,15:19:33.05:1196,33,0	1/1:3,9:12:21.03:838,21,0	1/1:2,5:8:15.05:682,15,0	1/1:2,9:13:12.04:541,12,0	0/0:16,0:16:42.10:0,42,925	0/0:23,0:23:69.18:0,69,1606	1/1:15,0:16:20.43:591,20,0	1/1:7,7:20:18.06:764,18,0	1/1:5,8:14:6.02:273,6,0	0/0:20,0:20:54.10:0,54,1088	0/0:17,0:17:39.12:0,39,901	0/0:4,0:4:9.03:0,9,191	1/1:0,4:4:6.02:273,6,0	1/1:0,5:7:3.01:136,3,0	1/1:3,5:10:9.03:409,9,0	1/1:4,20:24:45.15:2047,45,0	1/1:4,19:26:66.21:2241,66,0	0/0:20,0:20:48.15:0,48,1222	1/1:2,5:7:6.02:273,6,0
chr10	47999212	.	C	CAAAAAAAAACAAA	7092.12	PASS	AB=1.000;AC=26;AF=0.464;AN=56;BaseQRankSum=10.650;DP=481;FS=2.759;HRun=0;HaplotypeScore=164.0095;InbreedingCoeff=0.2404;MQ=74.36;MQ0=6;MQRankSum=-10.437;QD=23.48;ReadPosRankSum=5.652;VQSLOD=3.5716;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:13,0:13:30.13:310,0,30	0/0:4,0:4:12.03:0,12,361	0/0:50,0:25:4.58:0,5,253	0/1:44,0:21:35.29:35,0,135	0/1:25,0:25:68.48:578,0,68	0/0:14,0:14:42.14:0,42,1293	0/0:8,0:8:21.07:0,21,695	0/1:29,0:29:1.72:2,0,1478	0/1:13,0:13:5.71:409,0,6	0/1:18,0:18:17.84:526,0,18	1/1:11,0:11:8.82:420,9,0	1/1:9,0:9:15.05:358,15,0	0/1:12,0:12:12.25:267,0,12	0/0:16,0:16:25.23:0,25,1251	0/0:24,0:24:72.25:0,72,2269	1/1:3,11:18:21.07:1166,21,0	0/1:19,0:19:33.77:282,0,34	1/1:11,0:11:9.03:213,9,0	0/0:20,0:20:60.19:0,60,1624	0/0:18,0:19:44.68:0,45,1244	0/0:4,0:4:9.03:0,9,258	0/1:5,0:5:27.49:135,0,27	1/1:8,0:8:3.01:72,3,0	0/1:12,0:12:71.71:198,0,72	1/1:23,0:23:24.38:1050,24,0	1/1:26,0:27:46.98:930,47,0	0/0:20,0:20:59.37:0,59,1748	1/1:5,0:5:6.02:142,6,0
chr10	48000626	.	CT	C	1848.57	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-3.092;DP=593;FS=2.058;HRun=7;HaplotypeScore=113.2685;InbreedingCoeff=0.9882;MQ=68.56;MQ0=1;MQRankSum=-1.305;QD=15.03;ReadPosRankSum=-2.567;VQSLOD=2.8932;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:52.52:0,53,227	0/0:5,0:5:15.05:0,15,189	0/0:20,0:21:34.79:0,35,471	0/0:22,0:20:30.89:0,31,382	0/0:33,0:33:66.46:0,66,327	0/0:17,0:17:48.15:0,48,604	0/0:29,0:29:78.25:0,78,981	1/1:8,15:22:33.25:305,33,0	0/0:14,0:13:28.16:0,28,108	0/0:25,0:25:36.65:0,37,293	0/0:23,0:23:22.51:0,23,171	0/0:19,0:19:18.90:0,19,181	0/0:22,1:23:14.72:0,15,151	1/1:2,15:17:30.01:290,30,0	0/0:31,0:31:87.20:0,87,1036	0/0:3,0:18:31.44:0,31,167	0/0:23,1:24:25.17:0,25,155	0/0:19,0:19:32.90:0,33,150	1/1:10,7:17:33.74:298,34,0	1/1:2,19:21:36.01:347,36,0	1/1:5,15:20:26.99:254,27,0	0/0:27,0:26:59.78:0,60,296	0/0:22,0:22:30.54:0,31,169	0/0:20,0:20:37.06:0,37,151	0/0:24,0:24:33.90:0,34,138	0/0:22,0:22:54.86:0,55,347	1/1:5,20:25:54:543,54,0	0/0:8,0:8:17.40:0,17,63
chr10	48000639	.	GT	G	12399.11	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=7.775;DP=569;FS=0.000;HRun=1;HaplotypeScore=74.2196;InbreedingCoeff=0.9966;MQ=63.99;MQ0=4;MQRankSum=-0.224;QD=28.05;ReadPosRankSum=3.167;VQSLOD=4.6505;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,24:24:57.19:795,57,0	0/0:6,0:6:18.06:0,18,246	0/0:24,0:19:28.21:0,28,602	0/0:20,1:16:47.86:0,48,530	1/1:0,31:31:72.24:998,72,0	0/0:20,0:20:60.20:0,60,850	0/0:29,0:29:87.15:0,87,1138	1/1:23,0:20:43.85:351,44,0	1/1:0,14:13:33.11:461,33,0	1/1:1,20:20:51.12:712,51,0	1/1:0,15:15:42.14:581,42,0	1/1:3,12:15:42.08:537,42,0	1/1:1,17:18:48.05:643,48,0	1/1:23,1:24:41.30:371,41,0	0/0:27,0:27:75.23:0,75,1047	1/1:14,1:15:20.15:114,20,0	1/1:0,28:28:57.19:787,57,0	1/1:1,15:16:42.05:557,42,0	1/1:19,0:19:40:312,40,0	1/1:17,1:18:42.70:365,43,0	1/1:18,1:19:34.77:323,35,0	1/1:1,24:24:66.13:895,66,0	1/1:1,22:22:48.16:661,48,0	1/1:0,19:19:42.13:585,42,0	1/1:0,23:23:54.18:748,54,0	1/1:1,19:20:38.18:675,38,0	1/1:24,0:23:59.90:598,60,0	1/1:1,7:8:24.08:330,24,0
chr10	48000768	.	C	CT	5907.82	PASS	AB=0.680;AC=28;AF=0.500;AN=56;BaseQRankSum=4.270;DP=589;FS=0.000;HRun=11;HaplotypeScore=75.4600;InbreedingCoeff=0.6263;MQ=60.97;MQ0=12;MQRankSum=-0.641;QD=15.51;ReadPosRankSum=0.830;VQSLOD=5.3671;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,29:37:50.69:638,51,0	0/0:13,1:14:29.87:0,30,232	0/1:16,0:11:13.81:14,0,33	0/0:7,0:7:13.85:0,14,86	1/1:9,24:32:22.58:553,23,0	0/0:18,0:18:35.84:0,36,279	0/0:24,0:23:34.10:0,34,276	1/1:12,14:21:7.29:251,7,0	0/1:5,4:8:13.95:52,0,14	1/1:12,19:30:16.45:507,16,0	1/1:7,19:25:30.83:483,31,0	1/1:4,19:22:33.02:319,33,0	1/1:3,8:11:27:263,27,0	0/0:17,0:16:35.83:0,36,278	0/0:20,0:18:50.79:0,51,395	0/0:12,1:13:5.42:0,5,224	1/1:5,23:27:69.07:662,69,0	0/1:6,19:24:1.13:351,0,1	0/0:24,1:22:28.42:0,28,392	0/0:29,0:29:61.76:0,62,470	0/0:19,0:19:33.70:0,34,258	0/1:5,8:12:1.97:162,0,2	0/1:4,7:11:3.92:159,0,4	1/1:4,15:19:35.91:349,36,0	1/1:6,19:25:39.03:385,39,0	1/1:12,15:27:38.84:537,39,0	0/0:19,0:19:35.51:0,36,278	0/1:4,12:16:13.50:225,0,13
chr10	48001439	.	CTAGTAA	C	6207.81	PASS	AC=30;AF=0.556;AN=54;BaseQRankSum=10.816;DP=479;FS=8.171;HRun=0;HaplotypeScore=69.2869;InbreedingCoeff=0.8747;MQ=42.57;MQ0=8;MQRankSum=-8.369;QD=26.64;ReadPosRankSum=2.345;VQSLOD=3.2439;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,24:20:12.04:262,12,0	0/0:8,0:5:9.03:0,9,313	./.	0/0:11,0:1:3.01:0,3,43	1/1:1,21:14:27.09:538,27,0	0/0:19,0:19:39.09:0,39,1216	0/0:5,0:5:6.02:0,6,155	0/0:29,0:26:72.24:0,72,2198	1/1:1,16:12:15.05:332,15,0	1/1:0,21:18:51.17:1083,51,0	1/1:1,16:10:21.07:453,21,0	1/1:2,10:10:12.04:253,12,0	1/1:1,8:9:18.06:408,18,0	0/0:15,0:14:33.11:0,33,977	0/0:25,0:25:45.14:0,45,1487	0/0:25,0:21:51.18:0,51,1668	1/1:3,23:23:27.09:614,27,0	1/1:1,9:6:6.02:137,6,0	0/0:29,0:24:69.24:0,69,2278	0/0:19,0:16:36.12:0,36,1154	0/0:19,0:19:36.12:0,36,1229	1/1:0,6:5:9.03:205,9,0	1/1:0,10:10:21.07:466,21,0	1/1:2,13:11:6.02:109,6,0	1/1:0,24:19:33.11:730,33,0	1/1:1,14:10:27.09:550,27,0	0/0:36,0:36:69.22:0,69,2235	1/1:0,3:2:3.01:68,3,0
chr10	48001455	.	GA	G	389.45	PASS	AC=2;AF=0.037;AN=54;BaseQRankSum=1.087;DP=494;FS=0.000;HRun=6;HaplotypeScore=63.6142;InbreedingCoeff=0.6145;MQ=43.35;MQ0=6;MQRankSum=3.341;QD=15.58;ReadPosRankSum=3.893;VQSLOD=2.9785;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:22:17.62:0,18,173	0/0:9,0:6:12.04:0,12,155	./.	0/0:11,0:1:2.97:0,3,20	0/0:21,0:13:24.05:0,24,242	0/0:24,0:24:60.19:0,60,785	0/0:7,0:7:12.04:0,12,155	0/0:26,0:24:72.23:0,72,933	0/0:19,0:15:21.05:0,21,227	0/0:26,0:23:56.51:0,57,619	0/0:17,0:10:23.94:0,24,227	0/0:11,0:9:6.01:0,6,63	0/0:9,0:9:23.40:0,23,213	0/0:13,0:12:33.11:0,33,428	0/0:29,0:29:57.17:0,57,732	1/1:1,24:22:45.11:483,45,0	0/0:25,0:21:29.65:0,30,289	0/0:12,0:8:12.04:0,12,140	0/0:27,0:23:63.20:0,63,829	0/0:18,0:15:39.13:0,39,513	0/0:16,0:16:36.12:0,36,472	0/0:9,0:8:18.04:0,18,197	0/0:10,0:10:17.87:0,18,165	0/0:12,0:8:3.01:0,3,30	0/0:24,0:19:27.06:0,27,276	0/0:18,0:14:33.09:0,33,376	0/0:33,0:33:75.23:0,75,972	0/0:7,0:6:14.97:0,15,149
chr10	48001794	.	CT	C	1015.71	PASS	AB=0.748;AC=26;AF=0.520;AN=50;BaseQRankSum=1.082;DP=382;FS=5.726;HRun=8;HaplotypeScore=44.4707;InbreedingCoeff=0.5998;MQ=38.52;MQ0=59;MQRankSum=-2.584;QD=5.71;ReadPosRankSum=0.463;VQSLOD=-0.2251;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:12,6:8:2.88:28,3,0	0/0:9,0:7:16.85:0,17,175	./.	./.	1/1:5,8:12:8.95:87,9,0	0/0:20,0:18:33.48:0,33,367	0/0:13,0:7:8.38:0,8,66	0/0:28,0:21:33.52:0,34,381	0/1:7,4:7:7.68:49,0,8	1/1:6,4:10:9.01:87,9,0	1/1:4,9:10:18.01:171,18,0	0/0:6,4:6:5.30:0,5,25	1/1:2,5:4:3:29,3,0	0/0:15,0:13:23.99:0,24,221	0/0:19,0:15:22.41:0,22,243	1/1:4,3:5:2.68:78,3,0	1/1:9,14:18:8.81:186,9,0	1/1:11,5:7:1.07:50,1,0	0/0:19,0:17:33.05:0,33,370	0/0:25,0:23:35.49:0,35,385	0/0:15,0:9:9.47:0,9,94	1/1:2,2:4:2.97:29,3,0	1/1:11,9:19:4.92:181,5,0	./.	1/1:6,3:9:5.90:58,6,0	1/1:7,4:8:8.97:87,9,0	0/0:16,0:14:15.90:0,16,150	0/1:11,5:11:10.22:75,0,10
chr10	48001936	.	C	CAA	6265.19	PASS	AB=0.771;AC=32;AF=0.571;AN=56;BaseQRankSum=1.522;DP=481;FS=8.400;HRun=9;HaplotypeScore=59.4388;InbreedingCoeff=0.8954;MQ=64.15;MQ0=3;MQRankSum=2.233;QD=20.47;ReadPosRankSum=3.082;VQSLOD=2.9292;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,0:30:61.25:211,61,0	0/0:7,0:7:21.05:0,21,223	0/0:11,0:9:17.53:0,18,168	0/1:7,0:6:2.10:2,0,24	1/1:4,25:29:65.71:958,66,0	0/0:21,0:21:45.07:0,45,478	0/0:10,0:10:30.07:0,30,318	0/0:18,0:18:51.10:0,51,532	1/1:0,0:16:35.06:123,35,0	1/1:3,17:21:26.50:699,26,0	1/1:1,12:15:33:413,33,0	1/1:1,1:11:17.98:98,18,0	1/1:1,0:13:27.70:97,28,0	0/0:17,0:17:45.08:0,45,471	0/0:20,0:20:57.14:0,57,606	1/1:1,0:18:39.93:137,40,0	1/1:0,26:30:70.19:957,70,0	1/1:1,18:20:45.14:667,45,0	0/0:21,0:21:51.12:0,51,542	0/0:19,0:20:45.01:0,45,522	0/0:10,0:10:24.05:0,24,255	1/1:0,1:16:38.42:178,38,0	0/1:2,0:13:4.92:52,0,5	1/1:2,1:20:40.44:175,40,0	1/1:0,11:11:24.08:369,24,0	1/1:5,21:26:57.13:807,57,0	0/0:20,0:19:48.06:0,48,497	1/1:1,7:8:21.07:323,21,0
chr10	48002253	.	C	CTTTTT	4733.29	PASS	AB=0.788;AC=36;AF=0.643;AN=56;BaseQRankSum=-0.247;DP=537;FS=1.660;HRun=14;HaplotypeScore=113.0368;InbreedingCoeff=0.3611;MQ=58.46;MQ0=11;MQRankSum=-6.908;QD=11.49;ReadPosRankSum=-5.989;VQSLOD=0.0817;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:7,1:37:27.05:457,27,0	0/0:10,0:10:10.97:0,11,242	0/0:11,0:7:1.15:0,1,24	0/1:15,0:14:7.30:7,0,92	1/1:21,1:27:55.76:680,56,0	0/0:20,0:24:20.20:0,20,491	0/0:17,0:18:14.44:0,14,366	0/1:20,0:31:43.72:44,0,151	1/1:6,6:21:11:153,11,0	1/1:4,0:19:23.09:336,23,0	1/1:5,7:18:16.30:295,16,0	1/1:20,0:21:40.86:536,41,0	1/1:4,0:12:3.48:52,3,0	0/1:10,0:13:44.68:45,0,46	0/0:25,0:24:27.35:0,27,531	0/0:10,0:21:0.57:0,1,69	1/1:3,2:10:2.96:19,3,0	1/1:9,0:10:18.08:201,18,0	0/1:19,0:29:77.94:78,0,108	0/1:11,0:26:48.65:73,0,49	0/0:9,0:11:8.75:0,9,31	1/1:3,8:24:22.89:447,23,0	1/1:4,8:17:5.81:88,6,0	1/1:14,0:15:19.73:310,20,0	1/1:2,1:10:6.02:129,6,0	1/1:4,7:14:31.61:533,32,0	0/1:20,0:27:24.03:24,0,77	1/1:2,2:5:9.03:227,9,0
chr10	48005168	.	CA	C	11887.21	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=7.232;DP=610;FS=0.404;HRun=8;HaplotypeScore=59.7453;InbreedingCoeff=0.9761;MQ=81.88;MQ0=0;MQRankSum=-5.033;QD=24.01;ReadPosRankSum=3.674;VQSLOD=5.4171;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,22:23:54.08:522,54,0	0/0:15,0:15:42.13:0,42,507	0/0:20,1:20:51.15:0,51,595	0/0:19,0:19:5.68:0,6,386	1/1:2,28:30:75.10:724,75,0	0/0:17,0:17:51.16:0,51,616	0/0:19,0:19:48.14:0,48,571	1/1:5,29:34:84.08:792,84,0	1/1:1,17:18:42.07:406,42,0	1/1:6,24:30:72.11:695,72,0	1/1:2,28:30:84.13:811,84,0	1/1:2,20:22:60.10:579,60,0	1/1:2,15:17:42.07:406,42,0	1/1:2,14:16:33.05:319,33,0	0/0:24,0:24:69.21:0,69,834	1/1:3,24:27:69.11:666,69,0	1/1:2,12:14:30.05:290,30,0	1/1:5,17:22:44.74:434,45,0	1/1:4,19:23:57.08:550,57,0	1/1:2,29:31:78.11:753,78,0	1/1:2,17:19:45.07:435,45,0	1/1:0,25:25:72.11:695,72,0	1/1:2,14:16:39.06:377,39,0	1/1:0,12:13:32.88:318,33,0	1/1:2,21:23:54.08:522,54,0	1/1:2,21:23:63.10:608,63,0	1/1:0,28:28:81.13:782,81,0	1/1:0,11:11:21.03:203,21,0
chr10	48005955	.	C	CT	402.70	PASS	AB=0.929;AC=4;AF=0.071;AN=56;BaseQRankSum=-3.040;DP=376;FS=10.389;HRun=14;HaplotypeScore=47.1023;InbreedingCoeff=0.2669;MQ=66.41;MQ0=4;MQRankSum=-0.919;QD=8.57;ReadPosRankSum=-4.068;VQSLOD=0.3202;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:43.89:0,44,284	0/0:5,0:5:11.78:0,12,75	0/0:13,0:6:0.96:0,1,4	0/0:7,0:6:1.98:0,2,14	0/0:12,1:16:0.38:0,0,106	0/0:15,0:15:31.46:0,31,198	0/0:11,0:11:14.68:0,15,96	1/1:13,22:36:57.27:482,57,0	0/0:8,0:9:22.72:0,23,140	0/0:11,0:11:17.58:0,18,115	0/0:21,0:21:29.76:0,30,201	0/0:16,0:16:3.15:0,3,145	0/0:5,0:5:11.78:0,12,77	0/0:9,0:9:11.77:0,12,77	0/0:8,0:8:17.68:0,18,115	0/0:5,0:12:10.16:0,10,29	0/0:31,0:30:55.97:0,56,365	0/0:12,0:11:23.61:0,24,151	0/0:14,0:14:18.75:0,19,187	0/0:16,0:16:20.52:0,21,134	0/1:5,0:5:14.16:14,0,30	0/0:2,0:2:5.91:0,6,38	0/1:5,1:6:17.64:18,0,29	0/0:5,0:5:5.88:0,6,38	0/0:15,0:15:29.48:0,29,191	0/0:19,0:19:40.66:0,41,260	0/0:17,0:17:31.78:0,32,210	0/0:16,1:17:11.16:0,11,191
chr10	48006655	.	GA	G	9444.56	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=12.898;DP=613;FS=7.851;HRun=8;HaplotypeScore=62.5696;InbreedingCoeff=0.9955;MQ=86.73;MQ0=0;MQRankSum=-2.250;QD=26.09;ReadPosRankSum=3.746;VQSLOD=5.5273;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,12:15:36.06:348,36,0	0/0:10,0:10:30.09:0,30,362	0/0:19,0:18:47.97:0,48,532	0/0:22,0:22:43.34:0,43,463	1/1:2,27:29:81.13:782,81,0	0/0:28,0:28:78.24:0,78,940	0/0:15,0:15:39.08:0,39,455	0/0:32,0:32:87.23:0,87,1010	1/1:0,17:17:48.08:464,48,0	1/1:3,24:27:69.10:666,69,0	1/1:2,33:35:96.15:927,96,0	1/1:2,24:26:69.11:666,69,0	1/1:1,19:20:51.08:493,51,0	0/0:12,0:12:33.08:0,33,384	0/0:20,0:20:57.17:0,57,689	1/1:1,30:31:90.14:869,90,0	1/1:0,14:14:39.06:377,39,0	1/1:2,17:19:51.08:493,51,0	0/0:24,0:24:66.20:0,66,788	0/0:27,0:27:75.23:0,75,906	0/0:13,0:13:36.10:0,36,423	1/1:2,30:32:84.13:811,84,0	1/1:3,25:28:75.11:724,75,0	1/1:0,13:13:36.06:348,36,0	1/1:1,17:18:45.07:435,45,0	1/1:2,32:34:96.15:927,96,0	0/0:29,0:29:72.22:0,72,866	1/1:0,4:4:12.02:116,12,0
chr10	48007299	.	C	CGGG	941.43	PASS	AB=0.546;AC=28;AF=0.500;AN=56;BaseQRankSum=12.298;DP=532;FS=19.330;HRun=8;HaplotypeScore=105.1942;InbreedingCoeff=0.5591;MQ=80.25;MQ0=0;MQRankSum=-3.271;QD=2.85;ReadPosRankSum=1.543;VQSLOD=-0.5520;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:9,12:23:27.04:469,27,0	0/0:13,0:13:36.10:0,36,466	0/0:26,0:27:53.49:0,53,707	0/0:14,0:13:7.94:0,8,225	1/1:4,0:20:16.67:51,17,0	0/0:21,0:22:52.71:0,53,706	0/0:22,0:22:57.15:0,57,740	1/1:11,0:19:16.85:75,17,0	0/1:2,0:19:17.47:17,0,20	1/1:4,0:23:26.81:93,27,0	1/1:2,0:11:9.97:23,10,0	1/1:2,0:23:22.90:50,23,0	1/1:2,0:23:25.42:72,25,0	0/0:17,0:18:48:0,48,572	0/0:18,0:18:39.09:0,39,511	0/0:16,0:16:42.11:0,42,542	0/1:8,0:29:11.85:27,0,12	1/1:1,0:24:30.21:72,30,0	0/1:6,0:22:15.08:41,0,15	0/0:22,0:22:48.06:0,48,572	0/0:6,0:6:9:0,9,117	1/1:0,0:9:8.72:19,9,0	0/1:1,0:12:6.52:7,0,28	1/1:3,0:18:16.20:35,16,0	0/1:2,0:17:19.14:34,0,19	1/1:4,0:23:23.67:51,24,0	0/0:24,0:24:60.11:0,60,756	0/1:2,0:14:13.09:13,0,23
chr10	48007338	.	T	TA	699.11	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-5.661;DP=552;FS=1.905;HRun=1;HaplotypeScore=72.4877;InbreedingCoeff=0.9826;MQ=92.72;MQ0=0;MQRankSum=-1.536;QD=36.80;ReadPosRankSum=-1.908;VQSLOD=3.2773;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:45.15:0,45,584	0/0:7,0:7:18.06:0,18,234	0/0:26,0:26:60.41:0,60,724	0/0:21,0:21:60.19:0,60,762	0/0:25,0:25:66.21:0,66,854	0/0:27,0:27:78.25:0,78,1012	0/0:24,0:24:69.22:0,69,896	1/1:1,18:19:57.15:794,57,0	0/0:26,0:26:69.21:0,69,879	0/0:26,0:26:75.24:0,75,963	0/0:9,0:9:27.09:0,27,350	0/0:21,0:21:57.17:0,57,725	0/0:28,0:28:81.23:0,81,1008	0/0:20,0:20:54.18:0,54,701	0/0:20,0:20:57.19:0,57,740	0/0:20,0:20:57.19:0,57,740	0/0:26,0:26:75.24:0,75,971	0/0:25,0:25:69.20:0,69,878	0/0:21,0:21:63.19:0,63,804	0/0:18,0:18:48.14:0,48,608	0/0:11,0:11:33.07:0,33,398	0/0:12,0:12:33.06:0,33,409	0/0:9,0:9:21.05:0,21,256	0/0:16,0:16:45.10:0,45,564	0/0:17,0:17:45.15:0,45,584	0/0:19,0:18:57.19:0,57,739	0/0:27,0:27:81.26:0,81,1051	0/0:13,0:13:21.07:0,21,273
chr10	48007666	.	A	AGTGGTGGTGGTGGTGGTG	24845.47	PASS	AC=30;AF=0.556;AN=54;BaseQRankSum=4.038;DP=552;FS=18.866;HRun=0;HaplotypeScore=254.7186;InbreedingCoeff=0.9617;MQ=68.38;MQ0=3;MQRankSum=-14.660;QD=103.09;ReadPosRankSum=0.092;VQSLOD=3.1802;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:22,6:28:30.10:1819,30,0	0/0:10,0:10:27.09:0,27,1228	0/0:27,0:29:21.56:0,22,1866	0/0:23,0:23:57.18:0,57,1867	1/1:14,2:16:12.04:1017,12,0	0/0:18,0:18:42.14:0,42,1788	0/0:20,0:20:48.16:0,48,2190	0/0:34,0:34:45.15:0,45,2050	1/1:12,4:15:36.12:2565,36,0	1/1:17,1:18:30.10:1883,30,0	1/1:11,2:13:6.96:512,7,0	1/1:13,4:17:42.14:2928,42,0	1/1:15,2:18:45.11:2973,45,0	0/0:16,0:16:45.15:0,45,2220	0/0:30,0:30:69.22:0,69,3005	1/1:10,0:10:30.10:1856,30,0	1/1:11,1:12:24.08:1806,24,0	1/1:7,5:11:15.02:847,15,0	0/0:31,0:30:50.33:0,50,2045	0/0:28,0:28:66.23:0,66,2947	0/0:35,0:37:69.24:0,69,3210	1/1:15,4:18:24.08:1721,24,0	1/1:9,0:8:6.02:381,6,0	1/1:14,4:18:22.63:1503,23,0	1/1:12,0:12:15.05:1052,15,0	1/1:16,5:22:33.07:1984,33,0	0/0:31,0:31:81.23:0,81,3548	./.
chr10	48007845	.	GATACATAC	G	2539.68	PASS	AB=0.701;AC=32;AF=0.727;AN=44;BaseQRankSum=4.282;DP=648;FS=11.143;HRun=0;HaplotypeScore=183.1329;InbreedingCoeff=0.6356;MQ=52.65;MQ0=8;MQRankSum=-2.961;QD=6.32;ReadPosRankSum=1.779;VQSLOD=1.8768;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:3,0:10:20.95:0,21,170	./.	./.	0/1:14,0:30:0:0,0,0	0/0:9,0:22:30.10:0,30,999	0/0:19,0:18:6:0,6,124	./.	1/1:10,18:28:3.01:74,3,0	1/1:16,0:29:8.12:73,8,0	1/1:8,0:18:4.21:23,4,0	1/1:8,9:17:12.04:297,12,0	./.	1/1:14,6:20:3.01:74,3,0	0/0:40,0:40:78.27:0,78,2676	0/0:16,0:16:27.09:0,27,969	1/1:17,0:17:5.05:44,5,0	1/1:11,0:11:2.98:21,3,0	1/1:20,6:24:18.05:365,18,0	1/1:20,19:39:17.87:296,18,0	1/1:32,0:32:33.09:656,33,0	1/1:7,9:16:3:71,3,0	1/1:8,8:16:2.80:71,3,0	0/1:14,7:21:0:0,0,0	1/1:10,0:24:16.30:276,16,0	1/1:15,0:28:16.78:198,17,0	1/1:15,15:30:6.02:148,6,0	./.
chr10	48007934	.	A	ATC	754.75	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-6.208;DP=507;FS=2.036;HRun=0;HaplotypeScore=76.2678;InbreedingCoeff=0.8412;MQ=67.35;MQ0=0;MQRankSum=-0.509;QD=39.72;ReadPosRankSum=2.055;VQSLOD=5.6088;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:57.19:0,57,809	0/0:7,0:7:15.05:0,15,214	0/0:13,0:12:30.09:0,30,419	0/0:18,0:17:47.79:0,48,590	0/0:10,0:10:18.06:0,18,256	0/0:23,0:23:69.23:0,69,989	0/0:27,0:27:78.26:0,78,1117	0/0:25,0:25:54.98:0,55,782	0/0:28,0:28:63.19:0,63,882	0/0:16,0:16:42.14:0,42,601	0/0:8,0:8:21.07:0,21,301	0/0:22,0:22:66.22:0,66,946	0/0:18,0:18:45.15:0,45,644	0/0:18,0:18:48.16:0,48,680	0/0:23,0:23:66.22:0,66,944	1/1:1,18:19:7.99:837,8,0	0/0:26,0:26:72.24:0,72,1026	0/0:14,0:14:33.11:0,33,473	0/0:14,0:14:42.12:0,42,580	0/0:16,0:16:36.12:0,36,515	0/0:31,0:31:75.25:0,75,1075	0/0:12,0:11:24.08:0,24,338	0/0:6,0:6:9.03:0,9,129	0/0:28,0:28:72.24:0,72,1032	0/0:11,0:11:24.08:0,24,343	0/0:14,0:14:36.11:0,36,499	0/0:23,0:23:60.18:0,60,841	0/0:12,0:12:36.12:0,36,516
chr10	48008150	.	GGAT	G	43.19	PASS	AB=0.757;AC=1;AF=0.018;AN=56;BaseQRankSum=4.179;DP=578;FS=1.623;HRun=0;HaplotypeScore=78.8791;InbreedingCoeff=-0.0220;MQ=87.21;MQ0=0;MQRankSum=1.239;QD=1.54;ReadPosRankSum=-2.840;VQSLOD=1.2216;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:48.16:0,48,1134	0/0:9,0:9:27.09:0,27,638	0/1:19,9:23:99:118,0,1067	0/0:19,6:20:6.02:0,6,1163	0/0:28,0:27:78.27:0,78,1817	0/0:35,0:35:99:0,105,2411	0/0:12,0:12:36.12:0,36,828	0/0:34,0:34:99:0,102,2294	0/0:20,0:20:60.18:0,60,1326	0/0:33,0:33:99:0,99,2282	0/0:17,0:17:51.16:0,51,1159	0/0:13,0:13:39.12:0,39,862	0/0:20,0:20:54.17:0,54,1220	0/0:12,0:12:36.12:0,36,809	0/0:16,0:16:48.16:0,48,1135	0/0:35,0:35:99:0,105,2481	0/0:11,0:11:33.05:0,33,681	0/0:15,0:15:42.14:0,42,967	0/0:20,0:20:60.18:0,60,1326	0/0:27,0:27:81.28:0,81,1896	0/0:19,0:19:57.18:0,57,1278	0/0:22,0:22:66.23:0,66,1559	0/0:18,0:18:51.18:0,51,1184	0/0:19,0:19:57.20:0,57,1347	0/0:16,0:16:45.15:0,45,1062	0/0:25,0:25:75.26:0,75,1753	0/0:21,0:21:63.22:0,63,1449	0/0:10,0:10:30.10:0,30,709
chr10	48008635	.	A	AT	6886.96	PASS	AB=1.000;AC=31;AF=0.554;AN=56;BaseQRankSum=-13.067;DP=449;FS=1.690;HRun=7;HaplotypeScore=42.3533;InbreedingCoeff=0.9268;MQ=74.63;MQ0=0;MQRankSum=0.204;QD=29.18;ReadPosRankSum=3.230;VQSLOD=5.1817;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,15:16:33.10:399,33,0	0/0:6,0:6:18.03:0,18,174	0/1:4,0:4:11.81:12,0,70	0/0:11,0:11:21.50:0,22,202	1/1:4,22:27:69.16:808,69,0	0/0:25,0:25:60.07:0,60,572	0/0:11,0:11:30.05:0,30,290	0/0:31,0:31:75.08:0,75,712	1/1:3,12:15:39.12:470,39,0	1/1:4,21:25:60.17:713,60,0	1/1:2,14:16:16.28:467,16,0	1/1:0,12:12:33.10:399,33,0	1/1:2,7:9:17.96:217,18,0	0/0:9,0:9:27.04:0,27,260	0/0:12,0:12:33.05:0,33,319	0/0:17,0:17:48.02:0,48,442	1/1:0,10:10:27.08:326,27,0	1/1:1,21:22:58.73:692,59,0	0/0:24,0:24:63.09:0,63,604	0/0:25,0:25:66.10:0,66,637	0/0:11,0:10:30.05:0,30,290	1/1:2,12:14:30.06:347,30,0	1/1:2,15:17:42.13:505,42,0	1/1:0,8:8:24.07:290,24,0	1/1:0,13:13:36.11:435,36,0	1/1:4,14:18:42.09:480,42,0	0/0:31,0:28:84.13:0,84,811	1/1:0,10:10:27.08:326,27,0
chr10	48008725	.	CT	C	187.95	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=5.027;DP=502;FS=3.544;HRun=10;HaplotypeScore=53.9178;InbreedingCoeff=0.6284;MQ=78.46;MQ0=1;MQRankSum=1.554;QD=6.71;ReadPosRankSum=0.026;VQSLOD=1.1290;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:63.16:0,63,689	0/0:10,0:10:27.06:0,27,291	0/1:15,0:14:59.25:59,0,121	0/0:20,0:17:29.05:0,29,272	0/0:21,0:21:54.12:0,54,577	0/0:21,0:21:60.14:0,60,647	0/0:6,0:6:15.04:0,15,166	0/0:33,0:33:75.19:0,75,823	0/0:13,0:13:39.08:0,39,414	0/0:16,0:16:39.11:0,39,431	0/0:19,1:20:25.08:0,25,505	0/0:9,0:9:27.07:0,27,299	0/0:12,0:12:27.05:0,27,289	0/0:15,0:15:42.11:0,42,457	0/0:24,0:24:47.31:0,47,700	1/1:2,11:13:26.97:234,27,0	0/0:15,0:15:30.04:0,30,318	0/0:24,0:25:59.99:0,60,640	0/0:19,0:19:45.12:0,45,497	0/0:35,1:36:67.16:0,67,944	0/0:6,0:6:15.04:0,15,166	0/0:24,0:24:69.19:0,69,762	0/0:21,0:21:54.01:0,54,595	0/0:11,0:11:27.07:0,27,299	0/0:11,0:11:24.06:0,24,266	0/0:20,0:20:57.15:0,57,631	0/0:21,0:21:57.14:0,57,623	0/0:19,0:20:59.96:0,60,625
chr10	48010658	.	CGTCCGTCCGTCCGTCCGCCCGCCCGCCCGCCT	C	4780.45	PASS	AB=1.000;AC=21;AF=0.389;AN=54;BaseQRankSum=7.143;DP=388;FS=4.017;HRun=0;HaplotypeScore=305.9141;InbreedingCoeff=0.2420;MQ=45.85;MQ0=3;MQRankSum=-6.956;QD=23.21;ReadPosRankSum=0.936;VQSLOD=3.1506;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:9,14:23:17.95:305,18,0	0/0:4,0:4:11.25:0,11,610	0/0:6,0:3:6.02:0,6,101	0/0:7,0:2:3.01:0,3,43	./.	0/0:16,0:16:45.11:0,45,2621	0/0:22,0:22:57.18:0,57,3055	0/0:14,0:14:32.98:0,33,526	0/1:13,0:13:99:277,0,232	0/1:11,0:11:99:471,0,182	0/1:4,0:4:1.68:31,0,2	0/1:17,0:17:99:491,0,304	1/1:8,0:8:9.02:254,9,0	0/0:14,0:14:42.14:0,42,3181	0/0:9,0:9:21.07:0,21,2084	1/1:12,0:12:24.07:618,24,0	0/1:24,0:24:23.20:473,0,23	0/1:26,0:26:99:806,0,196	0/0:17,0:14:36.05:0,36,1092	0/0:6,0:6:18.06:0,18,1045	0/0:34,0:32:87.15:0,87,4024	1/1:11,0:11:9.03:122,9,0	0/1:9,0:9:57.11:75,0,57	0/1:25,0:25:87.77:88,0,411	0/1:10,0:10:99:236,0,113	1/1:12,0:12:21.06:419,21,0	0/0:22,0:22:66.14:0,66,4118	1/1:1,0:1:3.01:115,3,0
chr10	48010661	.	CCG	C	819.27	PASS	AB=0.752;AC=16;AF=0.296;AN=54;BaseQRankSum=7.900;DP=329;FS=8.342;HRun=0;HaplotypeScore=110.3713;InbreedingCoeff=-0.0405;MQ=47.31;MQ0=3;MQRankSum=-4.447;QD=7.12;ReadPosRankSum=1.845;VQSLOD=2.7972;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:14,4:18:5.15:0,5,11	0/0:4,0:4:12.04:0,12,219	0/1:6,0:3:9.69:10,0,88	0/0:8,0:4:9.03:0,9,132	./.	0/0:18,0:18:47.19:0,47,800	0/0:23,0:23:54.18:0,54,990	0/0:13,0:13:33.07:0,33,519	0/1:6,2:8:47.61:48,0,95	0/1:5,3:8:69.24:94,0,69	0/0:3,1:4:3.45:0,3,22	0/1:8,4:12:87.30:87,0,93	1/1:2,1:3:9:77,9,0	0/0:14,0:14:33.70:0,34,696	0/0:7,0:7:21.07:0,21,391	0/1:4,5:9:25.26:127,0,25	0/1:8,7:15:99:119,0,124	0/1:13,9:22:99:246,0,154	0/0:16,0:13:36.11:0,36,537	0/0:6,0:6:18.06:0,18,309	0/0:33,0:31:81.80:0,82,1408	1/1:3,6:9:0.80:4,1,0	0/1:5,2:7:17.84:18,0,37	0/0:10,8:18:5.83:0,6,203	0/1:5,3:8:39.13:39,0,79	0/1:4,3:7:17.55:77,0,18	0/0:22,0:22:62.69:0,63,1123	1/1:0,1:1:3:27,3,0
chr10	48010664	.	TCCGTCCGTCCGCCCGCCC	T	4442.51	PASS	AB=0.747;AC=21;AF=0.389;AN=54;BaseQRankSum=10.997;DP=310;FS=8.749;HRun=0;HaplotypeScore=175.3031;InbreedingCoeff=0.5366;MQ=46.53;MQ0=3;MQRankSum=-8.482;QD=38.97;ReadPosRankSum=4.252;VQSLOD=3.3440;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:14,4:18:0.47:77,0,0	0/0:4,0:4:11.25:0,11,622	0/0:5,0:4:12:0,12,252	0/0:8,0:3:9.03:0,9,314	./.	0/0:19,0:19:54.09:0,54,2560	0/0:24,0:24:63.18:0,63,3088	0/0:10,0:10:27.05:0,27,655	1/1:4,2:6:0.46:109,0,0	1/1:4,3:7:9.25:426,9,0	0/1:3,0:4:0.80:1,0,1	0/1:9,3:13:99:441,0,166	1/1:0,2:2:6.02:275,6,0	0/0:14,0:14:42.14:0,42,2620	0/0:7,0:7:21.07:0,21,1309	1/1:3,5:8:11.64:389,12,0	0/1:6,2:13:16.41:727,0,16	1/1:11,4:20:47.44:1238,47,0	0/0:14,0:11:33.10:0,33,1000	0/0:6,0:6:18.06:0,18,874	0/0:30,0:28:75.07:0,75,3382	1/1:3,4:9:5.68:33,6,0	0/0:3,2:5:3.07:0,3,45	0/0:11,5:19:16.45:0,16,105	0/1:4,2:7:53.57:130,0,54	1/1:3,2:6:17.20:459,17,0	0/0:22,0:22:66.18:0,66,3299	1/1:0,1:1:3.01:138,3,0
chr10	48010688	.	CCTGT	C	184.42	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-0.810;DP=434;FS=26.835;HRun=0;HaplotypeScore=162.4008;InbreedingCoeff=0.6051;MQ=45.61;MQ0=11;MQRankSum=-0.700;QD=2.53;ReadPosRankSum=1.552;VQSLOD=1.1360;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:19:3.81:19,4,0	0/0:8,0:8:24.08:0,24,385	0/0:8,0:3:3.01:0,3,52	0/0:7,0:4:3.01:0,3,42	0/0:16,0:16:2.87:0,3,17	1/1:12,10:21:6.02:93,6,0	1/1:12,19:30:12.04:189,12,0	0/0:16,0:12:4.74:0,5,13	0/0:8,0:8:11.90:0,12,106	0/0:13,0:13:26.99:0,27,372	0/0:12,0:12:9.02:0,9,123	0/0:21,0:21:36.12:0,36,576	0/0:12,0:12:23.24:0,23,329	0/0:16,0:16:21.65:0,22,409	0/0:9,0:9:27.08:0,27,523	0/0:8,0:8:1.27:0,1,4	0/0:22,0:22:31.17:0,31,352	0/0:22,0:22:34.16:0,34,309	0/0:13,0:10:12.04:0,12,268	0/0:5,0:5:11.07:0,11,195	0/0:30,0:28:39.98:0,40,696	0/0:19,0:19:24.08:0,24,385	0/0:9,0:9:5.72:0,6,53	0/0:28,0:28:38.54:0,39,384	0/0:17,0:17:17.99:0,18,269	0/0:19,0:19:40.97:0,41,475	0/0:16,0:15:36.12:0,36,740	0/0:7,0:6:15:0,15,196
chr10	48010736	.	T	TC	4176.16	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-4.483;DP=540;FS=34.128;HRun=7;HaplotypeScore=101.2637;InbreedingCoeff=0.9898;MQ=72.25;MQ0=4;MQRankSum=-3.407;QD=27.30;ReadPosRankSum=1.125;VQSLOD=1.5935;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:45.05:0,45,434	0/0:10,0:10:27.04:0,27,259	0/0:33,0:18:22.43:0,22,237	0/0:29,0:21:33.07:0,33,328	1/1:5,18:23:48.15:574,48,0	0/0:18,0:18:33.01:0,33,307	0/0:31,0:31:45:0,45,421	0/0:22,1:23:39.02:0,39,368	0/0:11,0:11:27.04:0,27,260	1/1:2,10:12:30.09:362,30,0	1/1:1,12:13:36.02:412,36,0	0/0:33,0:33:77.18:0,77,736	0/0:11,0:11:27.04:0,27,261	0/0:9,0:9:20.98:0,21,193	0/0:11,0:11:27.04:0,27,260	1/1:3,0:9:9.84:55,10,0	1/1:3,17:20:48.15:577,48,0	1/1:5,24:29:69.21:833,69,0	0/0:15,0:15:36.05:0,36,347	0/0:17,0:17:42.04:0,42,397	0/0:23,0:23:54.08:0,54,521	0/0:20,0:20:57.09:0,57,549	0/0:13,0:13:30.03:0,30,289	0/0:25,0:25:59.86:0,60,569	1/1:2,13:15:32.99:364,33,0	1/1:3,20:23:60.16:710,60,0	0/0:19,0:19:39.05:0,39,376	1/1:0,9:9:24.07:290,24,0
chr10	48011579	.	CT	C	8164.02	PASS	AB=0.962;AC=33;AF=0.611;AN=54;BaseQRankSum=11.552;DP=747;FS=12.496;HRun=11;HaplotypeScore=77.1819;InbreedingCoeff=0.9213;MQ=70.28;MQ0=2;MQRankSum=-0.004;QD=17.26;ReadPosRankSum=5.401;VQSLOD=4.7449;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:9,36:45:98.87:813,99,0	./.	0/0:31,1:21:43.45:0,43,350	0/1:24,1:17:24.71:25,0,164	1/1:5,29:34:83.80:678,84,0	0/0:26,0:26:68.84:0,69,714	0/0:23,0:23:50.48:0,50,512	0/0:38,1:39:65.52:0,66,874	1/1:5,25:30:64.09:513,64,0	1/1:8,25:33:71.86:586,72,0	1/1:3,20:24:61.96:498,62,0	1/1:7,24:31:44.85:517,45,0	1/1:2,27:28:77.91:640,78,0	0/0:15,0:15:39.10:0,39,413	0/0:28,0:28:72.14:0,72,743	1/1:6,26:32:74.88:615,75,0	1/1:4,18:23:21.02:368,21,0	1/1:5,15:20:32.95:271,33,0	0/0:26,1:26:38.51:0,39,608	0/0:24,2:26:34.60:0,35,631	0/0:15,0:15:33.04:0,33,333	1/1:7,28:35:48.83:603,49,0	1/1:5,16:21:48.81:395,49,0	1/1:2,12:14:26.96:222,27,0	1/1:3,24:27:65.92:542,66,0	1/1:11,28:39:80.79:658,81,0	0/0:40,1:42:83.38:0,83,1052	1/1:2,9:11:26.97:222,27,0
chr10	48013948	.	TTTTG	T	297.49	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.617;DP=588;FS=22.756;HRun=0;HaplotypeScore=101.5072;InbreedingCoeff=0.8673;MQ=84.39;MQ0=46;MQRankSum=-1.081;QD=15.66;ReadPosRankSum=1.894;VQSLOD=1.5977;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,17:19:24.04:391,24,0	0/0:6,0:6:18.03:0,18,341	0/0:40,0:34:71.66:0,72,1512	0/0:43,0:39:88.70:0,89,1679	0/0:16,0:13:27.05:0,27,482	0/0:16,0:16:42.13:0,42,964	0/0:23,0:23:66.15:0,66,1519	0/0:36,0:36:90.30:0,90,2024	0/0:23,0:18:19.88:0,20,378	0/0:19,0:18:30.13:0,30,280	0/0:15,0:14:15.05:0,15,261	0/0:20,0:18:23.89:0,24,373	0/0:19,0:16:20.64:0,21,352	0/0:15,0:15:43.39:0,43,998	0/0:23,0:23:60.21:0,60,1464	0/0:28,0:21:26.10:0,26,444	0/0:23,0:17:26.30:0,26,500	0/0:13,0:11:14.24:0,14,216	0/0:21,0:21:45.15:0,45,1046	0/0:15,0:15:30.10:0,30,730	0/0:30,0:30:78.27:0,78,1800	0/0:13,0:11:20.97:0,21,286	0/0:17,0:15:12.88:0,13,174	0/0:25,0:19:11.63:0,12,215	0/0:9,0:5:14.45:0,14,214	0/0:20,0:19:31.34:0,31,385	0/0:19,0:19:45.15:0,45,1123	0/0:18,0:13:17.79:0,18,215
chr10	48013970	.	GGTATGGTGT	G	1830.21	PASS	AB=1.000;AC=25;AF=0.446;AN=56;BaseQRankSum=3.901;DP=618;FS=32.195;HRun=0;HaplotypeScore=129.9908;InbreedingCoeff=0.6207;MQ=71.84;MQ0=72;MQRankSum=-2.349;QD=8.28;ReadPosRankSum=0.169;VQSLOD=1.0958;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:34.78:0,35,392	0/0:4,0:4:8.71:0,9,331	0/0:81,0:38:88.81:0,89,1644	0/0:80,0:41:88.77:0,89,1552	0/0:17,0:14:6.90:0,7,26	0/0:16,0:16:36.12:0,36,988	0/0:26,0:25:63.18:0,63,1400	0/0:34,0:32:77.21:0,77,1394	1/1:20,0:15:3:51,3,0	0/1:15,0:12:21.74:234,0,22	1/1:7,0:15:6:70,6,0	1/1:4,9:10:6.02:176,6,0	1/1:3,12:12:3.01:93,3,0	0/0:16,0:16:30.99:0,31,548	0/0:21,0:21:61.08:0,61,1725	1/1:10,9:13:9.03:224,9,0	0/1:20,0:13:16.99:42,0,17	0/1:11,0:9:3.20:132,0,3	0/0:23,0:21:50.84:0,51,953	0/0:13,0:13:39.13:0,39,971	0/0:26,0:24:53.26:0,53,997	1/1:11,0:7:4.20:60,4,0	1/1:3,14:15:5.97:176,6,0	1/1:22,0:16:3.01:46,3,0	1/1:10,0:6:6.02:107,6,0	1/1:3,16:17:29.98:392,30,0	0/0:18,0:18:48.16:0,48,1169	1/1:10,0:5:14.08:218,14,0
chr10	48013972	.	TATG	T	1155.18	PASS	AB=0.840;AC=24;AF=0.429;AN=56;BaseQRankSum=5.221;DP=617;FS=47.997;HRun=0;HaplotypeScore=93.0913;InbreedingCoeff=0.4717;MQ=69.46;MQ0=72;MQRankSum=-2.335;QD=5.00;ReadPosRankSum=-0.331;VQSLOD=0.1348;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:34.78:0,35,299	0/0:5,0:5:8.98:0,9,178	0/0:78,0:35:88.03:0,88,1643	0/0:79,0:40:94.25:0,94,1548	0/0:8,10:15:11.02:0,11,51	0/0:17,0:17:35.92:0,36,774	0/0:26,0:25:63.09:0,63,1197	0/0:35,0:33:77.68:0,78,1395	1/1:6,12:13:3.01:51,3,0	1/1:3,13:13:15.85:255,16,0	0/1:15,0:13:10.10:17,0,10	1/1:12,0:9:6:56,6,0	1/1:15,0:12:3.01:32,3,0	0/0:16,0:16:9.27:0,9,482	0/1:22,0:22:0.97:1,0,1047	1/1:21,0:13:8.99:81,9,0	0/1:11,9:13:20.86:42,0,21	0/1:5,6:9:5.03:72,0,5	0/0:26,0:23:50.87:0,51,867	0/1:13,0:13:17.15:17,0,543	0/0:24,0:22:17.95:0,18,725	0/1:7,5:8:8.86:9,0,28	1/1:16,1:15:6:55,6,0	0/0:8,14:16:2.90:0,3,17	1/1:10,0:6:6.02:107,6,0	1/1:19,0:17:29.98:332,30,0	0/0:20,0:20:47.89:0,48,963	1/1:10,0:5:13.60:216,14,0
chr10	48013975	.	G	GGT	401.29	PASS	AB=0.877;AC=26;AF=0.481;AN=54;BaseQRankSum=-1.190;DP=654;FS=1.128;HRun=0;HaplotypeScore=111.7362;InbreedingCoeff=0.4074;MQ=64.71;MQ0=75;MQRankSum=1.290;QD=1.04;ReadPosRankSum=-1.150;VQSLOD=2.0883;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:24:0:0,0,0	1/1:6,0:6:3.31:42,3,0	0/1:76,0:33:0:0,0,0	./.	0/0:15,0:16:11.02:0,11,51	0/1:14,0:20:19.63:20,0,20	0/1:24,5:28:26.05:39,0,26	1/1:37,0:35:1.25:4,1,0	0/1:14,0:14:0:0,0,0	1/1:17,0:15:0.47:1,0,0	0/0:14,0:13:5.64:0,6,27	0/0:10,0:9:5.68:0,6,28	0/0:12,0:12:2.84:0,3,14	1/1:19,0:20:2.98:22,3,0	1/1:25,1:26:14.98:158,15,0	0/0:14,0:13:8.52:0,9,42	0/0:16,0:14:5.68:0,6,28	0/0:7,0:9:5.53:0,6,27	1/1:25,0:22:5.97:47,6,0	1/1:10,0:13:14.64:105,15,0	1/1:22,0:24:8.49:60,8,0	0/0:11,0:8:5.68:0,6,28	0/0:18,0:17:5.51:0,6,28	0/0:20,0:18:5.54:0,6,26	0/1:9,0:6:0:0,0,0	0/0:20,0:19:2.46:0,2,13	1/1:22,0:24:6.67:47,7,0	1/1:10,0:6:0.47:1,0,0
chr10	48016071	.	CT	C	2027.74	PASS	AB=0.765;AC=26;AF=0.464;AN=56;BaseQRankSum=1.336;DP=541;FS=4.524;HRun=15;HaplotypeScore=69.5173;InbreedingCoeff=0.4553;MQ=61.13;MQ0=10;MQRankSum=1.477;QD=6.80;ReadPosRankSum=1.568;VQSLOD=2.8941;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:17:17.85:0,18,97	0/1:9,2:11:12.09:12,0,108	0/0:17,0:9:5.92:0,6,29	0/1:12,1:10:2.28:29,0,2	0/1:25,6:31:41.52:224,0,42	0/1:13,3:16:14.51:15,0,134	0/0:18,1:19:12.96:0,13,202	0/0:25,1:25:8.30:0,8,164	1/1:7,5:11:23.75:121,24,0	1/1:7,5:13:19.05:105,19,0	0/1:4,11:16:32.02:120,0,32	0/1:9,14:24:13.54:150,0,14	1/1:9,7:15:13.51:157,14,0	0/0:24,0:24:21.15:0,21,302	0/0:12,1:13:3.68:0,4,129	0/0:28,2:31:19.53:0,20,355	0/1:14,11:26:0.98:213,0,1	1/1:8,5:13:35.44:228,35,0	0/0:20,0:20:46.32:0,46,359	0/0:28,1:29:36.22:0,36,404	0/0:14,1:17:8.02:0,8,206	1/1:4,8:12:20.54:130,21,0	1/1:3,6:9:17.57:114,18,0	1/1:19,7:24:12.46:191,12,0	1/1:12,9:21:31.83:209,32,0	0/1:20,4:24:1.07:105,0,1	0/0:21,1:24:25.42:0,25,290	1/1:2,5:7:16.64:101,17,0
chr10	48016170	.	ACC	A	2453.49	PASS	AB=0.709;AC=30;AF=0.536;AN=56;BaseQRankSum=-0.945;DP=407;FS=14.882;HRun=12;HaplotypeScore=57.4181;InbreedingCoeff=0.6359;MQ=60.96;MQ0=28;MQRankSum=0.564;QD=9.89;ReadPosRankSum=5.314;VQSLOD=0.2928;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:8:14.98:0,15,158	0/0:3,0:4:5.51:0,6,53	0/0:25,0:9:21.01:0,21,223	0/0:30,0:5:13.34:0,13,143	1/1:16,9:25:17.97:184,18,0	0/0:11,0:11:6.45:0,6,66	0/0:16,0:16:21.08:0,21,267	0/0:11,1:10:12.91:0,13,68	0/1:2,1:6:22.02:22,0,25	1/1:4,6:11:20.20:193,20,0	1/1:7,9:19:16.87:125,17,0	0/0:10,1:12:8.49:0,8,61	0/1:7,1:12:23.23:38,0,23	1/1:7,8:17:17.75:164,18,0	0/0:15,0:15:29.16:0,29,343	0/0:9,0:17:16.48:0,16,102	1/1:9,19:30:53.28:493,53,0	1/1:2,6:8:9.02:92,9,0	1/1:6,9:16:29.49:260,29,0	1/1:7,5:12:5.97:61,6,0	1/1:9,13:24:29.48:267,29,0	0/0:5,0:7:5.42:0,5,26	0/1:8,0:9:3.59:7,0,4	0/1:5,2:12:21.08:44,0,21	1/1:7,7:14:18.01:183,18,0	1/1:2,10:11:21.01:213,21,0	1/1:4,9:14:16:242,16,0	1/1:1,2:3:8.51:70,9,0
chr10	48016994	.	T	TC	7278.33	PASS	AB=0.625;AC=41;AF=0.732;AN=56;BaseQRankSum=8.400;DP=495;FS=7.831;HRun=8;HaplotypeScore=79.6316;InbreedingCoeff=0.8544;MQ=89.86;MQ0=0;MQRankSum=-3.422;QD=20.80;ReadPosRankSum=5.891;VQSLOD=4.6945;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:12,16:28:20.68:492,21,0	0/0:8,0:8:21.01:0,21,192	0/0:23,0:23:53.69:0,54,479	0/0:23,0:23:35.61:0,36,327	1/1:4,13:17:8.64:353,9,0	0/0:9,0:9:24.01:0,24,219	0/0:24,0:24:44.98:0,45,401	0/0:27,0:27:62.92:0,63,561	1/1:9,13:22:51.14:577,51,0	1/1:3,7:10:21.06:242,21,0	1/1:3,11:15:27.05:294,27,0	1/1:5,12:17:45.12:508,45,0	1/1:3,17:20:45.13:515,45,0	1/1:5,0:16:21.30:124,21,0	0/0:31,0:31:86.78:0,87,777	1/1:4,19:23:20.68:492,21,0	1/1:0,19:20:50.98:568,51,0	1/1:0,11:11:30.09:346,30,0	1/1:3,3:11:23.23:176,23,0	1/1:2,2:16:29.08:186,29,0	1/1:8,1:16:25.61:170,26,0	1/1:1,17:19:45.12:509,45,0	0/1:2,3:5:15.43:92,0,15	1/1:4,21:25:56.84:634,57,0	1/1:2,11:13:21.06:242,21,0	1/1:4,12:16:8.64:353,9,0	1/1:2,1:18:19.89:121,20,0	1/1:2,10:12:2.62:284,3,0
chr10	48017701	.	TGAGAGAGAGAGAGAGAGAGAGAGAGAGGGGA	T	233.64	PASS	AB=1.000;AC=5;AF=0.100;AN=50;BaseQRankSum=0.441;DP=413;FS=0.000;HRun=0;HaplotypeScore=161.2578;InbreedingCoeff=0.3167;MQ=30.76;MQ0=59;MQRankSum=-0.282;QD=4.41;ReadPosRankSum=1.120;VQSLOD=2.7364;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:7:0.89:0,1,2	0/0:4,0:2:3.01:0,3,83	0/0:18,0:1:3.01:0,3,45	0/0:22,0:3:6.02:0,6,120	./.	0/0:14,0:14:8.92:0,9,183	0/0:18,0:12:7.68:0,8,58	0/1:20,0:15:22.86:23,0,52	0/0:14,0:11:8.36:0,8,67	0/0:17,0:13:12.77:0,13,619	0/0:12,0:10:0.89:0,1,2	0/0:12,0:10:0.47:0,0,1	0/0:9,0:9:3.85:0,4,90	0/0:16,0:12:0.94:0,1,2	0/0:15,0:12:12:0,12,250	0/0:7,0:7:7.99:0,8,99	0/0:15,0:10:2.80:0,3,99	0/0:11,0:6:2.74:0,3,12	1/1:8,2:7:6.93:145,7,0	0/0:7,8:13:0.47:0,0,1	./.	0/0:15,0:13:5.34:0,5,18	./.	0/0:22,0:17:0.47:0,0,1	0/0:12,0:11:5.21:0,5,17	0/0:24,0:22:35.22:0,35,688	1/1:22,0:20:4.64:167,5,0	0/0:7,0:5:3.76:0,4,416
chr10	48017755	.	GAGGAGA	G	1782.40	PASS	AB=0.962;AC=22;AF=0.393;AN=56;BaseQRankSum=4.269;DP=558;FS=0.000;HRun=0;HaplotypeScore=114.1898;InbreedingCoeff=0.4690;MQ=58.26;MQ0=41;MQRankSum=-0.453;QD=7.68;ReadPosRankSum=3.461;VQSLOD=2.1446;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:18:15.05:0,15,401	0/0:9,0:7:19.62:0,20,493	0/0:43,0:15:24.74:0,25,250	0/0:73,0:26:35.06:0,35,752	1/1:16,0:14:2.37:8,2,0	0/0:13,0:11:21.02:0,21,567	0/0:18,0:17:33.07:0,33,946	0/0:15,0:13:32.81:0,33,646	1/1:16,0:14:3.64:198,4,0	0/1:17,0:15:50.77:417,0,51	0/1:14,0:13:29.74:35,0,30	1/1:23,0:19:14.19:163,14,0	1/1:9,0:9:9.91:142,10,0	0/0:14,0:13:24.08:0,24,599	0/0:21,0:21:42.14:0,42,1177	0/0:18,0:17:27.08:0,27,575	0/1:19,0:16:10.54:115,0,11	1/1:7,0:7:9.03:158,9,0	0/0:8,0:7:17.98:0,18,359	0/0:21,0:21:29.94:0,30,740	0/0:29,0:26:57.19:0,57,1423	1/1:23,0:20:8.45:111,8,0	1/1:6,11:15:3.01:51,3,0	1/1:13,0:11:5.38:61,5,0	0/1:21,0:21:0:0,0,0	0/1:27,0:26:99:444,0,181	0/0:19,0:15:36.51:0,37,699	0/1:7,3:8:37.55:61,0,38
chr10	48017757	.	GGAGA	G	2521.08	PASS	AB=1.000;AC=25;AF=0.463;AN=54;BaseQRankSum=4.355;DP=534;FS=0.000;HRun=0;HaplotypeScore=94.2332;InbreedingCoeff=0.7906;MQ=60.61;MQ0=39;MQRankSum=-0.418;QD=13.06;ReadPosRankSum=3.415;VQSLOD=2.7505;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:19:15.05:0,15,378	0/0:9,0:7:18.06:0,18,452	0/0:43,0:16:24.37:0,24,247	0/0:74,0:27:34.02:0,34,725	1/1:4,11:13:3.01:53,3,0	0/0:13,0:11:18.06:0,18,439	0/0:18,0:17:36.12:0,36,828	0/0:16,0:14:35.82:0,36,672	1/1:14,0:13:5.62:279,6,0	1/1:8,8:14:7.50:436,8,0	1/1:5,9:13:6.02:88,6,0	1/1:7,15:18:14.95:264,15,0	1/1:2,6:8:11.98:186,12,0	0/0:11,0:11:24.08:0,24,596	0/0:22,0:20:39.13:0,39,951	0/0:16,0:16:29.99:0,30,615	1/1:6,13:16:7.13:254,7,0	1/1:0,6:6:9.03:158,9,0	0/0:8,0:7:15.05:0,15,323	0/0:21,0:21:30.10:0,30,739	0/0:29,0:26:57.19:0,57,1401	1/1:8,13:19:8.77:157,9,0	1/1:14,0:13:3.01:51,3,0	1/1:4,8:10:5.96:106,6,0	./.	1/1:10,13:22:36.90:614,37,0	0/0:15,0:13:33.05:0,33,667	0/1:7,0:6:4.97:74,0,5
chr10	48018722	.	AGCGTGC	A	5830.52	PASS	AB=0.805;AC=35;AF=0.648;AN=54;BaseQRankSum=2.327;DP=447;FS=7.691;HRun=0;HaplotypeScore=116.3812;InbreedingCoeff=0.5693;MQ=70.34;MQ0=2;MQRankSum=-0.116;QD=17.78;ReadPosRankSum=1.384;VQSLOD=3.9236;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:2,0:31:6.02:110,6,0	0/0:7,0:7:20.99:0,21,300	0/1:10,0:8:3.39:3,0,81	0/0:7,0:6:8.81:0,9,73	0/0:1,17:18:0.47:0,0,1	0/0:14,0:14:33.47:0,33,744	0/0:14,0:14:42.08:0,42,851	0/1:23,0:23:19.72:274,0,20	1/1:2,17:19:3.01:65,3,0	1/1:2,10:10:26.73:326,27,0	1/1:6,1:7:18.02:325,18,0	1/1:14,2:15:35.91:550,36,0	1/1:3,11:13:5.89:127,6,0	1/1:10,0:15:23.94:323,24,0	0/0:17,0:17:48.04:0,48,752	0/1:11,0:11:79.47:79,0,92	1/1:5,18:23:12.04:270,12,0	1/1:5,17:22:18.06:400,18,0	1/1:3,0:14:29.96:319,30,0	1/1:9,0:13:20.96:263,21,0	0/0:1,0:22:0.47:0,0,1	./.	0/1:1,16:17:0.41:1,0,0	0/1:1,21:22:0:0,0,0	1/1:10,1:11:27.01:479,27,0	1/1:2,26:28:77.59:1417,78,0	1/1:9,0:12:26.94:361,27,0	1/1:1,7:8:6.02:137,6,0
chr10	48018724	.	CGT	C	3183.34	PASS	AB=1.000;AC=35;AF=0.648;AN=54;BaseQRankSum=4.514;DP=429;FS=6.900;HRun=0;HaplotypeScore=104.3254;InbreedingCoeff=0.7755;MQ=67.66;MQ0=2;MQRankSum=-1.088;QD=10.98;ReadPosRankSum=1.483;VQSLOD=3.1382;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:29,1:30:5.86:38,6,0	0/0:7,0:7:20.87:0,21,206	0/0:9,0:7:9.85:0,10,93	0/0:5,0:4:8.85:0,9,62	0/0:17,0:17:0.47:0,0,1	0/0:13,0:13:29.95:0,30,356	0/0:14,0:14:41.87:0,42,435	1/1:23,0:23:54.52:401,55,0	1/1:17,1:18:2.99:24,3,0	1/1:12,0:10:26.66:184,27,0	1/1:7,0:7:18.01:175,18,0	1/1:15,0:14:35.89:324,36,0	1/1:12,1:13:5.83:51,6,0	1/1:13,2:15:23.92:209,24,0	0/0:17,0:17:47.73:0,48,440	1/1:11,0:11:23.36:176,23,0	1/1:19,4:23:12:108,12,0	1/1:17,4:21:18.02:170,18,0	1/1:12,0:12:29.44:201,29,0	1/1:11,2:13:20.94:179,21,0	0/0:22,0:21:0.47:0,0,1	./.	0/0:16,0:16:0.21:0,0,1	0/1:21,0:20:0:0,0,0	1/1:10,0:10:26.99:259,27,0	1/1:26,1:27:77.06:598,77,0	1/1:7,3:10:25.45:201,25,0	1/1:7,1:8:6.01:58,6,0
chr10	48018737	.	GCGCGCGCACACACACA	G	3905.57	PASS	AB=1.000;AC=31;AF=0.574;AN=54;BaseQRankSum=7.886;DP=474;FS=27.692;HRun=0;HaplotypeScore=168.3897;InbreedingCoeff=0.4685;MQ=53.73;MQ0=15;MQRankSum=-1.159;QD=11.80;ReadPosRankSum=6.140;VQSLOD=0.8879;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:38,0:37:8.71:149,9,0	0/0:7,0:6:12.02:0,12,290	1/1:3,0:1:2.94:18,3,0	0/0:3,0:2:2.97:0,3,20	1/1:19,0:19:0.25:1,0,0	0/0:19,0:17:40.02:0,40,1715	0/0:19,0:16:39.04:0,39,999	0/0:12,0:12:18.44:0,18,205	0/1:19,0:19:34.37:34,0,57	0/1:13,0:11:32.90:79,0,33	1/1:14,0:14:11.81:141,12,0	1/1:18,0:17:15.15:233,15,0	1/1:17,0:16:7.84:83,8,0	1/1:14,1:16:12.04:239,12,0	0/0:10,0:10:21.03:0,21,636	0/0:11,0:11:20.76:0,21,561	0/1:27,0:26:8.67:373,0,9	1/1:18,0:19:18.06:400,18,0	0/1:16,0:16:2.73:128,0,3	1/1:13,2:15:9.03:204,9,0	./.	0/0:18,0:18:3.01:0,3,36	0/0:20,0:19:3.11:0,3,36	0/1:31,0:28:25.47:25,0,46	1/1:16,0:14:19.31:271,19,0	1/1:29,0:28:40.92:910,41,0	1/1:8,2:11:20.10:488,20,0	1/1:10,0:9:6.02:129,6,0
chr10	48018739	.	GCGCGCACACACA	G	3803.82	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=7.610;DP=480;FS=17.237;HRun=0;HaplotypeScore=152.5200;InbreedingCoeff=0.7113;MQ=53.07;MQ0=17;MQRankSum=-1.556;QD=9.53;ReadPosRankSum=3.896;VQSLOD=0.9220;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:38,0:37:8.72:105,9,0	0/0:7,0:6:11.97:0,12,209	1/1:3,0:1:2.68:11,3,0	0/0:3,0:2:2.84:0,3,14	1/1:20,0:20:3.06:75,3,0	0/0:20,0:18:42.92:0,43,1221	0/0:19,0:16:34.99:0,35,652	0/0:11,0:11:11.47:0,11,96	1/1:18,0:19:7.88:119,8,0	1/1:13,0:11:5.94:73,6,0	1/1:13,0:13:12.76:108,13,0	1/1:18,0:17:17.25:158,17,0	1/1:16,0:16:9.03:173,9,0	1/1:16,0:16:11.80:168,12,0	0/0:10,0:10:18.03:0,18,411	0/0:11,0:11:16.03:0,16,368	1/1:24,4:27:11.40:453,11,0	1/1:15,2:18:18.06:447,18,0	1/1:14,0:14:9.94:91,10,0	1/1:15,0:15:8.61:141,9,0	1/1:28,0:25:3.01:74,3,0	1/1:16,0:18:2.04:6,2,0	1/1:19,0:18:5.81:57,6,0	1/1:31,0:28:8.88:109,9,0	1/1:19,0:17:18.89:160,19,0	1/1:31,1:31:62.92:796,63,0	1/1:10,0:10:18.05:352,18,0	1/1:9,1:9:6.02:129,6,0
chr10	48018743	.	GCACACACACA	G	1805.75	PASS	AB=0.949;AC=27;AF=0.519;AN=52;BaseQRankSum=4.521;DP=460;FS=6.268;HRun=0;HaplotypeScore=146.0474;InbreedingCoeff=0.4112;MQ=49.36;MQ0=18;MQRankSum=-2.733;QD=5.90;ReadPosRankSum=0.364;VQSLOD=2.1345;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:35,0:34:3.21:69,3,0	0/0:6,0:5:3.01:0,3,111	./.	./.	1/1:16,1:19:3.25:51,3,0	0/0:21,0:19:27.56:0,28,891	0/0:17,0:14:12.04:0,12,368	0/0:13,0:13:0.47:0,0,1	0/1:16,0:17:7.17:44,0,7	0/0:9,0:6:8.09:0,8,41	0/0:8,1:15:2.55:0,3,11	0/0:14,0:21:2.52:0,3,11	1/1:16,0:15:5.41:62,5,0	1/1:13,3:17:3.48:77,3,0	0/0:5,0:8:6.02:0,6,187	0/0:8,0:8:7.84:0,8,291	0/1:25,1:24:1.53:435,0,2	1/1:20,0:19:11.74:268,12,0	0/0:16,0:16:2.50:0,2,6	1/1:12,4:16:2.68:83,3,0	1/1:31,0:29:3.01:57,3,0	0/0:15,0:16:3.48:0,3,30	1/1:14,0:14:5.16:25,5,0	1/1:28,0:25:8.37:76,8,0	1/1:14,5:17:0.47:1,0,0	0/1:29,0:30:2.95:342,0,3	1/1:7,3:10:12.04:299,12,0	1/1:4,0:3:3:67,3,0
chr10	48019437	.	TC	T	894.51	PASS	AB=0.893;AC=25;AF=0.446;AN=56;BaseQRankSum=0.088;DP=547;FS=2.233;HRun=12;HaplotypeScore=73.8511;InbreedingCoeff=0.3804;MQ=70.90;MQ0=3;MQRankSum=1.663;QD=3.24;ReadPosRankSum=3.779;VQSLOD=-0.1566;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:18,1:19:10.73:11,0,67	0/0:8,0:8:3.48:0,3,31	0/0:48,1:22:16.13:0,16,116	0/0:50,1:26:6.98:0,7,208	1/1:12,1:15:13.47:80,13,0	0/0:14,0:15:8.99:0,9,74	0/0:20,1:22:8.52:0,9,201	0/1:14,0:14:0.18:0,0,1	0/1:16,7:23:15.82:37,0,16	0/0:18,4:22:0:0,0,0	1/1:11,6:17:7.97:52,8,0	1/1:10,4:14:5.95:46,6,0	1/1:7,7:15:13.80:98,14,0	0/0:20,0:16:9.40:0,9,66	0/1:23,0:23:63.87:64,0,98	0/0:25,0:25:53.40:0,53,261	1/1:12,7:22:29.99:203,30,0	1/1:4,3:7:5.96:46,6,0	0/0:16,0:15:14.91:0,15,119	0/0:13,0:13:3.87:0,4,46	0/1:19,2:21:30.32:30,0,80	0/1:18,3:25:24.28:66,0,24	0/1:13,3:16:4.99:57,0,5	1/1:18,5:24:16.35:121,16,0	1/1:13,0:13:11.89:90,12,0	0/0:9,3:12:0:0,0,0	0/0:17,0:17:15.85:0,16,127	1/1:6,2:8:10.17:71,10,0
chr10	48019444	.	C	CA	189.85	PASS	AB=0.615;AC=1;AF=0.018;AN=56;BaseQRankSum=6.002;DP=503;FS=30.985;HRun=0;HaplotypeScore=74.1747;InbreedingCoeff=0.1174;MQ=71.32;MQ0=3;MQRankSum=-2.735;QD=7.91;ReadPosRankSum=5.280;VQSLOD=1.4918;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:34.19:0,34,287	0/0:6,0:6:12.01:0,12,119	0/0:40,0:18:40.13:0,40,342	0/0:46,0:22:44.60:0,45,458	0/0:13,0:13:27.68:0,28,201	0/0:15,0:15:29.59:0,30,255	0/0:26,0:26:59.27:0,59,494	0/0:13,0:13:16.02:0,16,110	0/0:22,0:22:47.85:0,48,387	0/0:14,0:14:21.02:0,21,195	0/0:12,0:12:20.84:0,21,156	0/0:14,0:14:23.95:0,24,199	0/0:12,0:12:22.38:0,22,173	0/0:19,0:14:32.39:0,32,240	0/0:23,0:23:49.14:0,49,403	0/1:9,15:24:10.21:264,0,10	0/0:22,0:22:47.65:0,48,354	0/0:7,0:7:17.92:0,18,140	0/0:14,0:13:14.98:0,15,131	0/0:12,0:12:21.56:0,22,181	0/0:21,0:21:45.82:0,46,378	0/0:21,0:21:46.55:0,47,342	0/0:13,0:13:29.72:0,30,232	0/0:21,0:21:53.81:0,54,432	0/0:12,0:12:29.88:0,30,238	0/0:13,0:13:20.99:0,21,179	0/0:18,0:18:37.65:0,38,307	0/0:10,0:10:25.19:0,25,197
chr10	48019448	.	C	CCCA	998.78	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=2.185;DP=460;FS=3.183;HRun=0;HaplotypeScore=105.8826;InbreedingCoeff=0.0862;MQ=74.63;MQ0=2;MQRankSum=-1.441;QD=6.09;ReadPosRankSum=-0.441;VQSLOD=2.7494;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:18,0:18:7.81:8,0,98	0/0:6,0:6:5.81:0,6,63	0/0:39,0:17:26.25:0,26,255	0/0:40,0:22:4.47:0,4,249	0/0:10,0:10:21:0,21,184	0/0:14,0:14:5.71:0,6,50	0/1:29,0:29:12.38:12,0,239	0/1:14,0:14:68.75:69,0,83	0/0:17,0:17:12.81:0,13,125	0/0:14,0:14:2.96:0,3,27	0/0:11,0:11:11.99:0,12,107	0/0:9,0:9:15:0,15,132	0/0:13,0:13:19.09:0,19,179	0/0:16,0:12:5.83:0,6,49	0/1:19,0:19:9.74:10,0,92	1/1:11,15:26:65.29:970,65,0	0/0:19,0:19:36.02:0,36,325	0/0:4,0:4:8.97:0,9,73	0/0:15,0:14:13.77:0,14,82	1/1:7,0:7:2.98:24,3,0	0/1:24,0:24:8.22:8,0,222	0/0:17,0:17:25.91:0,26,234	0/0:11,0:11:2.06:0,2,67	0/0:19,0:19:23.95:0,24,216	0/0:11,0:11:10.23:0,10,123	0/0:10,0:10:14.99:0,15,132	0/1:15,0:15:35.75:36,0,57	0/1:12,0:12:1.74:2,0,135
chr10	48019816	.	TG	T	5087.41	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=12.090;DP=729;FS=0.773;HRun=1;HaplotypeScore=70.7615;InbreedingCoeff=0.9963;MQ=74.18;MQ0=0;MQRankSum=-2.252;QD=38.54;ReadPosRankSum=1.665;VQSLOD=5.5153;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,114,1719	0/0:12,0:12:36.10:0,36,545	0/0:29,0:29:87.28:0,87,1363	0/0:23,0:23:49.11:0,49,980	0/0:34,0:34:93.32:0,93,1476	0/0:26,0:26:78.27:0,78,1242	0/0:18,0:18:51.17:0,51,809	0/0:40,0:40:99:0,117,1806	0/0:22,0:22:66.21:0,66,1032	0/0:35,0:35:99:0,105,1654	0/0:28,0:28:81.28:0,81,1291	0/0:24,0:24:72.20:0,72,1080	0/0:28,0:28:84.29:0,84,1339	1/1:0,24:24:66.22:923,66,0	0/0:36,0:36:99:0,108,1659	0/0:31,0:31:93.30:0,93,1433	0/0:22,0:22:63.21:0,63,995	0/0:16,0:16:48.16:0,48,758	1/1:0,22:22:63.17:859,63,0	1/1:1,28:29:78.26:1083,78,0	1/1:0,28:28:78.26:1091,78,0	0/0:37,0:37:99:0,111,1767	0/0:30,0:30:87.30:0,87,1363	0/0:13,0:13:39.13:0,39,620	0/0:25,0:25:75.24:0,75,1177	0/0:24,0:24:69.22:0,69,1061	1/1:0,29:29:81.27:1132,81,0	0/0:5,0:5:15.05:0,15,240
chr10	48020222	.	CAT	C	18125.58	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=11.393;DP=1180;FS=5.144;HRun=0;HaplotypeScore=252.1941;InbreedingCoeff=1.0000;MQ=58.45;MQ0=10;MQRankSum=-6.500;QD=32.14;ReadPosRankSum=4.218;VQSLOD=4.9540;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:94.63:0,95,1491	0/0:18,0:18:54.14:0,54,866	0/0:49,0:40:98.35:0,98,1604	0/0:36,0:32:71.45:0,71,1127	1/1:12,17:29:78.23:1071,78,0	0/0:36,0:36:96.31:0,96,1718	0/0:23,0:23:56.97:0,57,922	0/0:51,0:50:99:0,138,2302	1/1:11,45:55:99:1692,126,0	1/1:21,47:67:99:2644,196,0	1/1:6,21:26:59.91:795,60,0	1/1:19,34:52:99:1860,141,0	1/1:15,35:49:99:1669,120,0	0/0:54,1:55:99:0,114,2505	0/0:48,0:48:99:0,129,2217	0/0:53,1:54:99:0,117,2608	1/1:3,22:25:53.97:661,54,0	1/1:7,15:22:40.67:708,41,0	0/0:21,0:20:57.20:0,57,1029	0/0:53,0:53:99:0,150,2471	0/0:80,0:80:99:0,184,3266	1/1:12,32:41:87.20:1145,87,0	1/1:14,29:43:81.16:1035,81,0	1/1:17,22:38:69.65:942,70,0	1/1:11,27:38:96.24:1263,96,0	1/1:9,42:50:99:2074,147,0	0/0:44,0:43:99:0,120,2065	1/1:5,14:19:43.35:565,43,0
chr10	48020264	.	GCA	G	21359.09	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=16.916;DP=1197;FS=0.252;HRun=0;HaplotypeScore=251.7241;InbreedingCoeff=0.9996;MQ=56.65;MQ0=2;MQRankSum=0.451;QD=27.00;ReadPosRankSum=6.598;VQSLOD=5.2972;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:86.26:0,86,1387	0/0:13,0:13:39.12:0,39,632	0/0:47,0:39:83.40:0,83,1241	0/0:55,0:44:91.79:0,92,1192	1/1:6,27:33:83.39:1064,83,0	0/0:37,0:37:93.26:0,93,1465	0/0:30,0:30:81.17:0,81,1299	0/0:66,0:66:99:0,159,2564	1/1:8,45:53:99:1751,141,0	1/1:13,41:54:99:1745,138,0	1/1:2,18:20:35.88:463,36,0	1/1:8,50:58:99:1849,103,0	1/1:10,36:46:99:1280,105,0	1/1:6,51:57:99:1737,135,0	0/0:62,1:63:99:0,124,2605	0/0:48,0:48:99:0,126,2078	1/1:11,14:26:25.76:512,26,0	1/1:8,15:23:42.14:540,42,0	1/1:6,17:21:39.09:471,39,0	1/1:4,45:49:99:1428,111,0	1/1:9,61:70:99:1930,150,0	1/1:10,33:43:72.21:909,72,0	1/1:6,37:43:78.24:989,78,0	1/1:8,37:45:60.80:861,61,0	1/1:10,30:40:75.24:965,75,0	1/1:12,32:44:99:1302,105,0	1/1:9,39:48:96.31:1235,96,0	1/1:8,8:16:27.03:328,27,0
chr10	48021675	.	T	TA	2966.94	PASS	AB=0.821;AC=33;AF=0.589;AN=56;BaseQRankSum=-7.227;DP=514;FS=4.434;HRun=13;HaplotypeScore=83.2540;InbreedingCoeff=0.2800;MQ=72.25;MQ0=3;MQRankSum=-0.748;QD=8.20;ReadPosRankSum=0.788;VQSLOD=2.9955;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:35,3:39:28.88:29,0,359	0/1:7,1:8:3.98:4,0,120	0/0:38,0:23:6.94:0,7,67	0/1:26,0:20:5.81:6,0,50	1/1:8,12:22:31.69:253,32,0	0/0:17,0:19:40.64:0,41,272	0/0:11,1:13:6.89:0,7,181	0/0:10,0:35:36.40:0,36,143	1/1:4,8:13:0.28:133,0,0	0/1:4,11:15:11.15:189,0,11	0/1:8,8:17:1.80:254,0,2	1/1:2,4:6:9.01:84,9,0	1/1:4,8:12:12.01:111,12,0	0/1:18,0:18:4.57:5,0,135	0/1:9,1:10:1.09:1,0,135	1/1:4,1:12:20.08:114,20,0	1/1:4,12:16:21.44:333,21,0	0/1:4,13:17:2.39:240,0,2	0/1:21,2:22:59.06:59,0,86	0/0:20,0:20:29.48:0,29,134	0/1:9,0:9:10.61:11,0,43	1/1:2,8:10:20.98:186,21,0	1/1:6,15:21:12.49:258,12,0	1/1:5,5:10:15:133,15,0	1/1:4,16:21:12.30:245,12,0	1/1:5,18:23:30.44:416,30,0	0/0:23,0:24:29.62:0,30,173	0/1:4,8:13:5.73:83,0,6
chr10	48021688	.	AC	A	538.59	PASS	AB=0.932;AC=10;AF=0.179;AN=56;BaseQRankSum=1.256;DP=522;FS=1.305;HRun=2;HaplotypeScore=84.7901;InbreedingCoeff=0.7326;MQ=71.13;MQ0=3;MQRankSum=-0.848;QD=5.03;ReadPosRankSum=-3.290;VQSLOD=-0.5632;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:91.30:0,91,1099	0/0:9,0:9:27.05:0,27,316	0/0:40,0:24:25.40:0,25,225	0/0:23,0:16:23.10:0,23,243	0/0:20,0:20:47.82:0,48,416	0/0:18,0:18:43.75:0,44,497	0/0:15,0:15:43.86:0,44,457	0/0:39,0:38:56.32:0,56,382	0/0:13,0:13:29.88:0,30,256	0/0:15,0:15:41.97:0,42,387	0/0:20,0:20:51.63:0,52,450	0/0:5,0:5:11.97:0,12,94	0/0:10,0:10:17.74:0,18,147	0/1:18,2:20:20.28:113,0,20	0/0:13,0:13:39.04:0,39,417	1/1:9,0:10:23.11:117,23,0	0/0:14,0:14:41.54:0,42,338	0/0:19,0:19:44.65:0,45,372	1/1:24,2:25:14.40:160,14,0	1/1:19,1:20:5.03:83,5,0	1/1:10,0:10:13.29:108,13,0	0/0:12,0:12:32.63:0,33,258	0/0:18,0:18:41.90:0,42,359	0/0:11,0:11:26.94:0,27,222	0/0:24,0:24:50.94:0,51,432	0/0:25,0:25:70.70:0,71,605	0/1:20,1:21:5.60:117,0,6	0/0:11,0:11:20.97:0,21,183
chr10	48022045	.	T	TA	7479.60	PASS	AB=0.581;AC=35;AF=0.625;AN=56;BaseQRankSum=-9.042;DP=614;FS=3.752;HRun=11;HaplotypeScore=70.1415;InbreedingCoeff=0.7395;MQ=76.37;MQ0=0;MQRankSum=-0.827;QD=17.77;ReadPosRankSum=0.325;VQSLOD=5.9235;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:5,1:41:38.46:0,38,174	0/0:8,0:8:23.88:0,24,182	0/0:21,1:21:20.60:0,21,181	0/0:14,0:11:1.94:0,2,57	1/1:9,15:24:15.84:342,16,0	0/0:16,0:16:32.74:0,33,255	0/0:23,1:25:37.34:0,37,463	0/0:23,0:26:47.92:0,48,342	1/1:5,22:28:30.03:519,30,0	1/1:3,18:24:6.40:410,6,0	1/1:4,14:18:35.47:331,35,0	1/1:8,21:29:45.90:465,46,0	1/1:5,22:27:33.88:525,34,0	1/1:2,17:20:27.70:446,28,0	0/0:24,0:25:52.76:0,53,397	0/0:15,0:15:35.86:0,36,278	0/1:5,20:26:3.87:481,0,4	1/1:1,7:8:18.04:183,18,0	1/1:7,10:17:18.31:343,18,0	1/1:6,19:26:30.66:461,31,0	0/1:7,14:22:53.92:219,0,54	1/1:3,18:22:41.91:400,42,0	1/1:5,19:25:24.50:417,25,0	0/1:6,13:19:7.39:296,0,7	1/1:5,15:20:21.85:403,22,0	1/1:10,27:37:43.59:760,44,0	1/1:7,11:18:6.82:251,7,0	1/1:2,8:11:24.35:228,24,0
chr10	48022653	.	TA	T	5946.66	PASS	AB=0.729;AC=30;AF=0.536;AN=56;BaseQRankSum=9.915;DP=558;FS=0.716;HRun=11;HaplotypeScore=61.6669;InbreedingCoeff=0.7819;MQ=72.60;MQ0=0;MQRankSum=-0.431;QD=18.88;ReadPosRankSum=3.109;VQSLOD=5.9079;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,1:27:45.87:0,46,668	0/0:14,1:15:11.45:0,11,327	0/0:21,0:18:6.25:0,6,216	0/0:23,0:17:1.31:0,1,151	1/1:5,27:32:80.89:664,81,0	0/0:12,0:12:36.01:0,36,349	0/0:16,1:17:17.32:0,17,364	0/0:32,2:34:10.93:0,11,520	1/1:0,14:14:41.95:345,42,0	1/1:2,26:28:77.64:617,78,0	1/1:2,15:17:44.95:369,45,0	1/1:2,12:14:4.08:239,4,0	1/1:1,10:11:23.97:197,24,0	0/0:12,0:12:36.09:0,36,384	0/0:18,0:18:39.07:0,39,401	1/1:2,17:19:38.93:320,39,0	1/1:3,16:19:44.17:352,44,0	1/1:2,14:17:37.95:295,38,0	0/1:16,3:19:10.21:10,0,302	0/0:23,0:23:60.15:0,60,640	0/0:17,0:17:17.51:0,18,391	1/1:2,26:28:80.84:655,81,0	0/1:6,13:19:53.53:229,0,54	1/1:1,15:18:14.04:300,14,0	1/1:1,14:15:38.95:320,39,0	1/1:0,30:29:86.89:714,87,0	0/0:24,0:24:41.62:0,42,577	1/1:1,14:15:38.90:320,39,0
chr10	48022786	.	CGTGTGTGTGTGTGTGTGTGTGTGT	C	1088.18	PASS	AB=1.000;AC=26;AF=0.591;AN=44;BaseQRankSum=3.002;DP=547;FS=9.023;HRun=0;HaplotypeScore=285.8276;InbreedingCoeff=0.3777;MQ=73.51;MQ0=26;MQRankSum=-1.174;QD=3.86;ReadPosRankSum=0.581;VQSLOD=1.0013;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:33:51.15:0,51,1346	0/0:8,0:8:18.06:0,18,886	./.	./.	0/0:11,0:11:0.47:0,0,1	0/0:17,0:15:21.07:0,21,1101	0/0:25,0:24:21.07:0,21,932	0/1:25,0:25:36.85:63,0,37	1/1:15,1:16:3.01:186,3,0	0/0:20,0:19:2.98:0,3,21	./.	1/1:25,0:23:3.01:51,3,0	./.	./.	0/0:19,0:19:33.11:0,33,1714	1/1:12,0:18:1.48:165,1,0	1/1:18,5:19:3.01:186,3,0	0/1:19,0:19:18.82:19,0,39	0/0:17,0:17:5.19:0,5,14	1/1:18,0:22:3.01:167,3,0	1/1:51,0:49:2.03:7,2,0	1/1:14,0:13:3:33,3,0	1/1:8,4:11:2.94:18,3,0	1/1:24,0:23:3.89:46,4,0	1/1:8,1:9:3.01:187,3,0	1/1:18,0:18:6.02:93,6,0	./.	1/1:6,0:4:2.22:7,2,0
chr10	48023212	.	CCT	C	920.66	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.821;DP=705;FS=8.507;HRun=0;HaplotypeScore=84.1179;InbreedingCoeff=0.9694;MQ=89.55;MQ0=0;MQRankSum=-3.728;QD=31.75;ReadPosRankSum=1.907;VQSLOD=5.1942;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,105,1890	0/0:9,0:9:27.09:0,27,506	0/0:27,0:27:68.68:0,69,1033	0/0:28,0:28:69.11:0,69,1140	0/0:27,0:27:81.25:0,81,1464	1/1:1,28:29:69.18:1016,69,0	0/0:22,0:22:66.23:0,66,1218	0/0:28,0:28:78.27:0,78,1454	0/0:23,0:23:66.21:0,66,1192	0/0:36,0:36:99:0,105,1920	0/0:20,0:20:60.21:0,60,1115	0/0:16,0:16:48.15:0,48,860	0/0:30,0:30:87.28:0,87,1592	0/0:21,0:21:60.21:0,60,1124	0/0:37,0:37:99:0,105,1950	0/0:29,0:28:87.28:0,87,1587	0/0:27,0:27:81.22:0,81,1396	0/0:25,0:25:75.21:0,75,1343	0/0:21,0:21:60.16:0,60,1012	0/0:34,0:34:99:0,99,1815	0/0:37,0:37:99:0,111,2025	0/0:27,0:27:81.25:0,81,1420	0/0:26,0:26:69.22:0,69,1259	0/0:20,0:20:60.19:0,60,1092	0/0:15,0:15:45.14:0,45,811	0/0:27,0:27:81.24:0,81,1401	0/0:22,0:22:63.19:0,63,1116	0/0:6,0:6:12.04:0,12,225
chr10	48023875	.	T	TAGGC	14687.72	PASS	AB=0.552;AC=27;AF=0.482;AN=56;BaseQRankSum=-16.125;DP=596;FS=8.026;HRun=0;HaplotypeScore=94.4426;InbreedingCoeff=0.9166;MQ=87.65;MQ0=3;MQRankSum=-5.481;QD=55.85;ReadPosRankSum=3.525;VQSLOD=5.8955;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,102,1757	0/0:14,0:14:42.14:0,42,764	0/0:24,0:24:57.20:0,57,1029	0/0:21,0:21:10.56:0,11,612	1/1:0,12:13:27.07:644,27,0	0/0:29,0:29:78.21:0,78,1341	0/0:24,0:24:63.22:0,63,1159	0/0:36,0:36:99:0,99,1783	1/1:0,16:16:45.15:1188,45,0	1/1:2,13:15:39.12:972,39,0	1/1:3,9:12:21.07:553,21,0	1/1:2,21:25:63.15:1600,63,0	1/1:1,19:23:57.13:1497,57,0	0/0:18,0:18:51.17:0,51,938	0/0:28,0:28:81.25:0,81,1430	0/0:27,0:27:75.26:0,75,1380	1/1:1,18:19:44.97:1187,45,0	1/1:1,16:17:48.16:1262,48,0	0/0:6,0:6:17.55:0,18,285	0/0:17,0:17:48.16:0,48,883	0/0:29,0:29:72.23:0,72,1294	1/1:2,11:13:27.09:710,27,0	0/1:3,13:16:25.26:683,0,25	1/1:6,30:38:69.08:1761,69,0	1/1:5,16:21:39:906,39,0	1/1:6,17:24:57.19:1407,57,0	0/0:21,0:21:60.21:0,60,1097	1/1:3,8:8:12.04:317,12,0
chr10	48024250	.	A	AT	7501.08	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-8.909;DP=406;FS=2.613;HRun=8;HaplotypeScore=39.6749;InbreedingCoeff=0.9495;MQ=68.88;MQ0=8;MQRankSum=-1.987;QD=28.09;ReadPosRankSum=3.017;VQSLOD=5.1401;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:74.90:0,75,663	0/0:5,0:5:15.01:0,15,137	0/0:11,0:4:2:0,2,47	0/0:21,1:12:23.80:0,24,165	1/1:3,16:19:45.07:503,45,0	0/0:20,0:20:59.98:0,60,533	0/0:15,0:14:42.02:0,42,384	0/0:30,0:27:75.01:0,75,672	1/1:2,9:11:24.07:277,24,0	1/1:0,11:11:33.10:381,33,0	1/1:2,11:13:33.10:381,33,0	1/1:1,9:10:24.07:277,24,0	1/1:4,10:14:27.08:311,27,0	1/1:1,10:11:30.09:346,30,0	0/0:10,0:10:24.01:0,24,219	1/1:1,11:12:27.08:312,27,0	1/1:4,16:20:48.14:554,48,0	1/1:3,16:18:43.94:489,44,0	1/1:3,11:14:36.07:402,36,0	1/1:1,15:16:44.91:467,45,0	1/1:1,12:13:36.07:401,36,0	1/1:0,6:6:18.05:208,18,0	1/1:1,3:4:9.03:104,9,0	1/1:1,14:15:33.10:381,33,0	1/1:1,12:13:36.11:416,36,0	1/1:0,17:17:51.12:568,51,0	1/1:2,18:19:39.11:449,39,0	1/1:0,8:8:24.07:277,24,0
chr10	48025439	.	TGAG	T	1519.58	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.290;DP=702;FS=1.422;HRun=0;HaplotypeScore=111.7041;InbreedingCoeff=0.9986;MQ=85.18;MQ0=0;MQRankSum=-3.921;QD=38.96;ReadPosRankSum=1.957;VQSLOD=4.7988;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,38:39:99:1614,99,0	0/0:11,0:11:33.11:0,33,748	0/0:27,0:27:75.26:0,75,1648	0/0:19,0:19:54.18:0,54,1149	0/0:26,0:26:75.26:0,75,1671	0/0:35,0:35:99:0,102,2268	0/0:29,0:29:84.29:0,84,1904	0/0:48,0:48:99:0,138,3060	0/0:25,0:25:72.25:0,72,1631	0/0:30,0:30:90.30:0,90,1992	0/0:24,0:24:66.23:0,66,1495	0/0:27,0:27:78.27:0,78,1766	0/0:29,0:29:87.30:0,87,1963	0/0:21,0:21:63.22:0,63,1403	0/0:35,0:35:99:0,105,2350	0/0:25,0:25:72.25:0,72,1632	0/0:27,0:27:78.27:0,78,1704	0/0:20,0:20:57.20:0,57,1292	0/0:30,0:30:90.30:0,90,1944	0/0:21,0:21:63.22:0,63,1426	0/0:15,0:15:45.15:0,45,1020	0/0:19,0:19:54.18:0,54,1193	0/0:13,0:13:27.09:0,27,612	0/0:15,0:15:42.14:0,42,949	0/0:18,0:18:48.16:0,48,1063	0/0:29,0:29:87.29:0,87,1924	0/0:29,0:29:87.30:0,87,1949	0/0:16,0:16:42.14:0,42,952
chr10	48028005	.	A	AG	3089.09	PASS	AB=0.874;AC=24;AF=0.429;AN=56;BaseQRankSum=-4.208;DP=612;FS=33.000;HRun=0;HaplotypeScore=91.6831;InbreedingCoeff=0.7243;MQ=63.07;MQ0=17;MQRankSum=4.921;QD=10.76;ReadPosRankSum=3.723;VQSLOD=1.8263;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:21:57.79:0,58,427	0/0:13,0:12:35.07:0,35,383	0/0:66,0:22:28.93:0,29,276	0/0:60,0:23:16.84:0,17,183	1/1:33,3:35:56.91:380,57,0	0/0:23,0:23:59.27:0,59,547	0/0:9,0:8:21.01:0,21,222	0/0:25,0:23:38.63:0,39,308	1/1:10,6:16:20.14:308,20,0	1/1:29,0:29:45.38:401,45,0	1/1:27,2:29:25.36:279,25,0	0/1:3,14:18:0.07:207,0,0	1/1:1,12:14:19.30:203,19,0	0/0:6,0:6:16.56:0,17,123	0/0:14,0:14:34.97:0,35,338	0/0:14,0:13:37.55:0,38,257	0/1:18,0:16:28.42:52,0,28	0/1:19,1:20:11.19:108,0,11	0/0:12,0:11:28.63:0,29,184	0/0:25,0:25:54.65:0,55,403	0/0:7,0:7:11.86:0,12,86	1/1:2,11:13:33.95:272,34,0	1/1:4,16:22:6.58:198,7,0	1/1:0,7:7:18.05:194,18,0	1/1:19,2:20:6.64:175,7,0	1/1:29,1:30:44.18:434,44,0	0/0:28,0:28:50.22:0,50,396	0/1:14,0:14:7.58:89,0,8
chr10	48030284	.	TAAC	T	3100.67	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=10.449;DP=804;FS=6.334;HRun=0;HaplotypeScore=111.8519;InbreedingCoeff=0.9997;MQ=89.47;MQ0=0;MQRankSum=-4.538;QD=45.60;ReadPosRankSum=2.741;VQSLOD=5.5003;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,66:68:99:3196,184,0	0/0:13,0:13:36.12:0,36,822	0/0:36,0:36:99:0,99,2193	0/0:27,0:27:75.26:0,75,1662	0/0:21,0:21:60.21:0,60,1351	0/0:25,0:25:69.24:0,69,1632	0/0:28,0:28:84.29:0,84,1988	0/0:30,0:30:87.30:0,87,2013	0/0:34,0:34:99:0,99,2343	0/0:22,0:22:66.23:0,66,1504	0/0:12,0:12:36.12:0,36,851	0/0:30,0:30:87.25:0,87,1961	0/0:18,0:18:51.18:0,51,1207	0/0:26,0:26:78.25:0,78,1768	0/0:47,0:47:99:0,138,3264	0/0:38,0:38:99:0,111,2449	0/0:35,0:35:99:0,105,2454	0/0:17,0:17:48.16:0,48,1091	0/0:23,0:23:63.22:0,63,1486	0/0:31,0:31:90.30:0,90,2081	0/0:58,0:58:99:0,172,3987	0/0:23,0:23:69.24:0,69,1628	0/0:17,0:17:48.16:0,48,1105	0/0:33,0:33:96.33:0,96,2270	0/0:18,0:18:54.19:0,54,1277	0/0:38,0:38:99:0,111,2628	0/0:20,0:20:60.21:0,60,1419	0/0:16,0:16:48.16:0,48,1135
chr10	48031331	.	TTATA	T	2900	PASS	AC=30;AF=0.556;AN=54;BaseQRankSum=-2.996;DP=238;FS=2.120;HRun=0;HaplotypeScore=47.0059;InbreedingCoeff=0.7539;MQ=75.34;MQ0=2;MQRankSum=-3.972;QD=25.22;ReadPosRankSum=2.657;VQSLOD=2.9660;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:3,0:7:19.35:0,19,95	0/0:1,0:1:3.01:0,3,70	0/0:9,0:2:2.99:0,3,24	0/0:18,0:9:13.83:0,14,150	1/1:4,11:15:18.02:266,18,0	0/0:15,0:15:45.14:0,45,1030	./.	0/0:8,0:29:64.61:0,65,350	1/1:1,4:5:9.03:157,9,0	1/1:2,8:10:24.07:385,24,0	1/1:0,7:7:12.04:172,12,0	1/1:0,4:4:6.02:104,6,0	1/1:0,2:2:6.02:104,6,0	0/0:2,0:2:3:0,3,25	0/0:9,0:9:27.08:0,27,546	1/1:3,3:6:6.02:104,6,0	1/1:1,14:15:21.07:365,21,0	1/1:2,15:17:30.10:506,30,0	0/0:4,0:12:24:0,24,101	0/0:1,0:4:8.61:0,9,62	0/0:3,0:8:11.19:0,11,51	1/1:1,0:1:3.01:52,3,0	1/1:0,3:3:9.03:156,9,0	1/1:1,2:3:3.01:51,3,0	1/1:1,6:7:6.02:104,6,0	1/1:2,2:4:6.02:101,6,0	0/0:1,0:8:11.19:0,11,51	1/1:1,15:16:27.09:469,27,0
chr10	48033816	.	AGGGTG	A	899.93	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.240;DP=541;FS=12.742;HRun=0;HaplotypeScore=98.3967;InbreedingCoeff=0.9908;MQ=83.33;MQ0=0;MQRankSum=-2.423;QD=45.00;ReadPosRankSum=-3.914;VQSLOD=1.9056;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,108,3258	0/0:6,0:6:18.06:0,18,569	0/0:18,0:18:51.18:0,51,1574	0/0:20,0:20:54.86:0,55,1620	0/0:26,0:26:78.27:0,78,2389	0/0:15,0:15:36.12:0,36,1136	0/0:16,0:16:48.16:0,48,1501	1/1:3,17:20:51.15:995,51,0	0/0:14,0:14:39.13:0,39,1234	0/0:20,0:20:60.21:0,60,1902	0/0:16,0:16:48.16:0,48,1448	0/0:19,0:19:54.17:0,54,1642	0/0:20,0:20:57.20:0,57,1807	0/0:23,0:23:69.20:0,69,1969	0/0:25,0:25:75.24:0,75,2262	0/0:17,0:17:51.13:0,51,1517	0/0:23,0:22:66.23:0,66,2088	0/0:17,0:17:51.17:0,51,1499	0/0:15,0:15:45.15:0,45,1328	0/0:24,0:24:69.23:0,69,2064	0/0:26,0:26:72.23:0,72,2153	0/0:24,0:24:69.22:0,69,1976	0/0:19,0:19:48.16:0,48,1499	0/0:18,0:18:48.16:0,48,1508	0/0:14,0:14:39.13:0,39,1236	0/0:19,0:19:54:0,54,1700	0/0:22,0:22:66.22:0,66,2023	0/0:9,0:9:27.09:0,27,857
chr10	48033900	.	TACACACAC	T	2166.89	PASS	AB=0.895;AC=34;AF=0.680;AN=50;BaseQRankSum=5.175;DP=455;FS=16.741;HRun=0;HaplotypeScore=128.9157;InbreedingCoeff=0.3084;MQ=56.31;MQ0=11;MQRankSum=-6.021;QD=6.90;ReadPosRankSum=-0.635;VQSLOD=1.6278;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:18.06:0,18,694	0/0:5,0:5:3.01:0,3,120	./.	0/1:25,0:20:0:0,0,0	1/1:8,2:10:2.84:16,3,0	0/0:15,0:17:12.03:0,12,394	0/0:22,0:21:22.01:0,22,673	./.	1/1:8,5:13:5.23:289,5,0	1/1:15,0:14:6.45:77,6,0	1/1:10,1:11:3:26,3,0	1/1:10,3:12:3.01:71,3,0	1/1:10,5:16:15.05:355,15,0	1/1:6,1:13:8.92:146,9,0	0/0:18,0:20:45.14:0,45,1495	0/1:13,1:17:26.39:137,0,26	1/1:15,3:16:9.03:224,9,0	0/1:16,3:19:25.72:65,0,26	./.	1/1:13,0:13:2.83:14,3,0	0/1:23,0:22:17.09:17,0,18	1/1:14,5:18:6.02:149,6,0	0/1:12,0:13:6.56:7,0,12	0/1:16,0:23:20.24:20,0,94	1/1:3,7:12:14.78:246,15,0	1/1:12,3:16:8.23:178,8,0	1/1:9,0:14:11.61:64,12,0	1/1:3,5:8:9.03:224,9,0
chr10	48034126	.	GT	G	3674.84	PASS	AB=0.739;AC=30;AF=0.536;AN=56;BaseQRankSum=-0.333;DP=480;FS=5.379;HRun=12;HaplotypeScore=64.5434;InbreedingCoeff=0.5186;MQ=71.74;MQ0=1;MQRankSum=0.546;QD=11.78;ReadPosRankSum=3.413;VQSLOD=3.4969;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,30:38:53.10:567,53,0	0/0:5,0:5:12.01:0,12,110	0/0:21,0:16:1.89:0,2,152	0/1:15,2:12:13.60:14,0,83	1/1:4,9:13:20.64:162,21,0	0/0:9,0:9:18.04:0,18,183	0/1:19,3:23:3.01:3,0,302	0/0:34,1:37:13.32:0,13,621	1/1:2,14:16:32.84:255,33,0	1/1:4,10:14:32.85:255,33,0	0/1:5,9:14:3.69:155,0,4	0/1:3,9:13:1.44:163,0,1	1/1:3,8:11:10.26:90,10,0	0/0:5,0:12:17.04:0,17,86	0/1:14,1:15:3.06:3,0,296	0/1:12,2:14:10.39:10,0,267	1/1:4,21:26:47.56:355,48,0	1/1:1,14:15:38.85:302,39,0	0/0:10,0:24:45.13:0,45,248	0/0:6,0:12:11.49:0,11,62	0/0:6,0:26:30.40:0,30,181	0/1:4,7:14:0.30:150,0,0	1/1:1,12:13:32.84:251,33,0	1/1:2,16:18:38.84:302,39,0	1/1:3,11:14:29.88:232,30,0	1/1:1,14:15:41.84:325,42,0	0/0:9,0:21:37.72:0,38,247	0/1:2,6:9:13.45:82,0,13
chr10	48034997	.	C	CA	759.02	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.865;DP=546;FS=1.891;HRun=1;HaplotypeScore=53.2283;InbreedingCoeff=0.9983;MQ=86.93;MQ0=0;MQRankSum=-4.049;QD=33.00;ReadPosRankSum=1.012;VQSLOD=3.3424;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,21:23:57.19:854,57,0	0/0:12,0:12:27.09:0,27,350	0/0:20,0:20:54.14:0,54,652	0/0:20,0:20:46.32:0,46,599	0/0:23,0:23:66.20:0,66,841	0/0:28,0:28:84.26:0,84,1077	0/0:14,0:14:42.11:0,42,516	0/0:33,0:33:93.29:0,93,1182	0/0:13,0:13:39.13:0,39,506	0/0:18,0:17:54.17:0,54,688	0/0:26,0:26:78.25:0,78,1010	0/0:16,0:16:48.12:0,48,581	0/0:21,0:21:63.20:0,63,818	0/0:19,0:19:54.17:0,54,688	0/0:24,0:24:69.22:0,69,896	0/0:18,0:18:54.16:0,54,686	0/0:17,0:17:51.17:0,51,662	0/0:14,0:14:36.07:0,36,448	0/0:18,0:18:54.17:0,54,687	0/0:21,0:21:63.20:0,63,816	0/0:28,0:28:78.24:0,78,997	0/0:12,0:12:36.12:0,36,467	0/0:17,0:17:51.17:0,51,661	0/0:21,0:21:57.18:0,57,739	0/0:19,0:19:57.16:0,57,723	0/0:15,0:15:45.15:0,45,584	0/0:25,0:25:72.20:0,72,904	0/0:11,0:11:33.11:0,33,428
chr10	48035787	.	T	TGCA	22805.05	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=-10.289;DP=515;FS=3.544;HRun=0;HaplotypeScore=65.4855;InbreedingCoeff=0.9963;MQ=71.18;MQ0=0;MQRankSum=-5.244;QD=58.32;ReadPosRankSum=4.939;VQSLOD=6.7851;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,14:15:30.10:706,30,0	0/0:11,0:11:33.11:0,33,582	0/0:15,0:15:44.85:0,45,654	0/0:16,0:15:30.26:0,30,403	1/1:1,25:27:69.24:1624,69,0	0/0:23,0:23:63.22:0,63,1098	0/0:11,0:11:30.10:0,30,529	0/0:31,0:31:90.29:0,90,1507	1/1:0,9:9:27.09:638,27,0	1/1:4,24:29:84.23:1813,84,0	1/1:0,24:23:60.21:1412,60,0	1/1:0,12:12:36.12:850,36,0	1/1:1,12:15:33.11:770,33,0	1/1:1,14:15:36.12:850,36,0	0/0:17,0:17:48.16:0,48,847	1/1:0,16:16:45.15:1063,45,0	1/1:0,17:18:45.15:1063,45,0	1/1:0,13:12:33.11:780,33,0	1/1:1,19:21:63.17:1341,63,0	1/1:4,29:34:75.26:1672,75,0	1/1:0,12:12:30.10:704,30,0	1/1:1,6:7:18.06:425,18,0	1/1:2,14:16:39.13:920,39,0	1/1:0,6:7:18.06:425,18,0	1/1:4,19:23:54.19:1276,54,0	1/1:3,25:30:84.23:1782,84,0	1/1:0,20:19:57.20:1342,57,0	1/1:0,23:25:57.20:1347,57,0
chr10	48038374	.	G	GA	1807.99	PASS	AB=0.856;AC=18;AF=0.321;AN=56;BaseQRankSum=-3.149;DP=473;FS=6.935;HRun=12;HaplotypeScore=63.4577;InbreedingCoeff=0.4109;MQ=62.23;MQ0=1;MQRankSum=0.880;QD=8.78;ReadPosRankSum=-1.805;VQSLOD=2.0329;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,18:34:60.18:682,60,0	0/0:10,1:11:0.65:0,1,168	0/0:11,0:4:2.98:0,3,22	0/0:10,0:5:0.16:0,0,15	0/0:27,0:28:55.20:0,55,394	0/0:15,0:16:40.79:0,41,290	0/0:13,0:13:35.79:0,36,263	0/0:25,0:25:50.61:0,51,370	1/1:4,12:17:18.34:161,18,0	0/1:23,0:23:10.28:10,0,240	0/0:10,0:11:19.83:0,20,132	1/1:4,14:18:21.03:204,21,0	1/1:1,7:8:12.02:117,12,0	0/1:12,0:12:23.44:48,0,23	0/0:17,0:18:35.76:0,36,263	0/0:18,1:19:12.53:0,13,255	0/0:17,0:18:34.82:0,35,247	0/0:14,0:15:22.86:0,23,159	0/1:19,2:21:55.62:56,0,65	0/0:23,0:24:24.03:0,24,174	1/1:5,0:5:6.68:40,7,0	1/1:1,18:21:48.59:429,49,0	0/1:5,12:18:20.13:136,0,20	0/1:4,5:9:9.89:76,0,10	0/0:9,0:11:27.93:0,28,187	0/0:25,0:26:49.69:0,50,354	0/1:20,0:20:33.43:33,0,100	0/0:10,0:11:21.75:0,22,193
chr10	48038931	.	A	AAAAC	9570.76	PASS	AB=0.702;AC=28;AF=0.500;AN=56;BaseQRankSum=-6.766;DP=640;FS=4.030;HRun=0;HaplotypeScore=124.3062;InbreedingCoeff=0.7987;MQ=59.92;MQ0=4;MQRankSum=-1.744;QD=25.32;ReadPosRankSum=-1.258;VQSLOD=4.0326;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,22:39:55.03:1374,55,0	0/0:5,0:5:3.01:0,3,47	0/0:12,0:11:9.02:0,9,108	0/0:13,0:10:6.02:0,6,90	1/1:14,0:24:21.07:390,21,0	0/0:18,0:18:36.10:0,36,515	0/0:16,0:16:27.09:0,27,420	0/0:28,0:28:12.03:0,12,166	0/1:14,9:24:22.56:470,0,23	1/1:11,3:24:33.09:547,33,0	1/1:13,0:30:39.05:629,39,0	1/1:6,12:17:33.11:777,33,0	1/1:9,17:28:47.88:1121,48,0	0/0:7,0:26:51.04:0,51,468	0/0:36,0:36:63.21:0,63,978	0/0:10,0:26:26.93:0,27,239	0/1:17,0:30:2.80:292,0,3	1/1:15,0:17:8.24:113,8,0	0/0:13,0:13:5.05:0,5,44	0/0:4,0:15:30.03:0,30,280	0/0:4,0:23:48.52:0,49,446	1/1:10,20:30:57.19:1268,57,0	1/1:7,7:15:18.06:424,18,0	1/1:8,15:25:27.09:636,27,0	1/1:13,0:31:36.12:636,36,0	1/1:17,0:35:42.04:687,42,0	0/0:12,0:27:39.04:0,39,363	1/1:2,0:5:12.04:208,12,0
chr10	48040418	.	CGTGT	C	361.95	PASS	AB=0.947;AC=5;AF=0.093;AN=54;BaseQRankSum=1.153;DP=531;FS=0.000;HRun=0;HaplotypeScore=109.1230;InbreedingCoeff=0.3078;MQ=55.82;MQ0=10;MQRankSum=0.683;QD=4.07;ReadPosRankSum=1.424;VQSLOD=1.3076;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:35:8.94:0,9,170	0/0:12,0:13:23.80:0,24,460	./.	0/1:37,0:16:0.23:0,0,0	0/0:14,0:14:6.02:0,6,97	0/0:20,0:23:32.30:0,32,529	0/1:13,1:16:23.89:24,0,229	0/0:24,0:24:15.05:0,15,315	0/0:16,0:16:8.51:0,9,177	0/0:14,0:14:21.07:0,21,446	0/0:9,0:9:3.01:0,3,71	0/0:21,0:21:12.04:0,12,229	0/0:14,0:14:2.53:0,3,29	0/0:14,0:13:6.02:0,6,116	0/0:18,0:18:17.80:0,18,366	1/1:11,8:20:30.09:440,30,0	0/0:25,0:27:9.03:0,9,192	0/0:14,0:17:27.05:0,27,477	0/0:13,0:17:21.54:0,22,407	0/0:8,0:10:3.01:0,3,52	0/0:49,0:49:36.55:0,37,625	0/0:5,0:6:3.01:0,3,52	0/0:8,0:8:6.01:0,6,69	0/1:16,0:15:0:0,0,0	0/0:15,0:15:6.01:0,6,78	0/0:33,0:33:57.14:0,57,1037	0/0:5,0:9:6.02:0,6,105	0/0:12,0:12:5.98:0,6,58
chr10	48042507	.	CTAGA	C	967.49	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.259;DP=731;FS=0.000;HRun=0;HaplotypeScore=115.0348;InbreedingCoeff=0.9977;MQ=71.52;MQ0=0;MQRankSum=-1.216;QD=35.83;ReadPosRankSum=1.214;VQSLOD=3.7500;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,153,3809	0/0:11,0:11:33.11:0,33,785	0/0:31,0:30:68.47:0,68,1684	0/0:31,0:30:75.18:0,75,1665	0/0:23,0:23:66.23:0,66,1729	0/0:24,0:24:72.25:0,72,1852	0/0:19,0:19:57.20:0,57,1520	0/0:42,0:41:99:0,111,2837	0/0:25,0:25:72.25:0,72,1857	0/0:27,0:26:78.27:0,78,2008	0/0:25,0:25:69.23:0,69,1785	0/0:31,0:31:90.31:0,90,2301	0/0:22,0:22:66.19:0,66,1614	0/0:20,0:20:54.19:0,54,1396	0/0:30,0:30:87.30:0,87,2228	1/1:0,27:27:57.20:1062,57,0	0/0:36,0:36:96.33:0,96,2533	0/0:34,0:34:90.31:0,90,2321	0/0:16,0:16:45.15:0,45,1117	0/0:29,0:29:84.29:0,84,2188	0/0:43,0:43:99:0,120,3095	0/0:19,0:19:54.19:0,54,1390	0/0:18,0:18:51.17:0,51,1356	0/0:20,0:20:54.19:0,54,1332	0/0:24,0:24:66.23:0,66,1755	0/0:15,0:15:42.14:0,42,1074	0/0:28,0:28:78.27:0,78,2047	0/0:8,0:8:24.08:0,24,640
chr10	48043135	.	AGC	A	2103.66	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=8.703;DP=838;FS=0.551;HRun=0;HaplotypeScore=97.8080;InbreedingCoeff=0.9995;MQ=70.10;MQ0=0;MQRankSum=-2.754;QD=41.25;ReadPosRankSum=2.955;VQSLOD=5.6583;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,51:51:99:2199,135,0	0/0:17,0:17:51.18:0,51,1036	0/0:28,0:28:84.27:0,84,1635	0/0:27,0:26:51.89:0,52,1305	0/0:36,0:36:99:0,108,2134	0/0:27,0:27:78.27:0,78,1584	0/0:36,0:36:99:0,108,2135	0/0:40,0:40:99:0,117,2208	0/0:28,0:28:84.29:0,84,1693	0/0:26,0:26:78.27:0,78,1581	0/0:25,0:25:72.22:0,72,1390	0/0:31,0:31:93.32:0,93,1889	0/0:37,0:37:99:0,108,2187	0/0:30,0:30:90.28:0,90,1742	0/0:36,0:36:99:0,108,2109	0/0:30,0:30:90.29:0,90,1746	0/0:27,0:27:78.27:0,78,1561	0/0:29,0:29:84.24:0,84,1622	0/0:22,0:22:66.23:0,66,1304	0/0:27,0:27:81.28:0,81,1635	0/0:37,0:37:99:0,111,2225	0/0:24,0:24:72.25:0,72,1462	0/0:28,0:28:81.24:0,81,1551	0/0:38,0:38:99:0,114,2249	0/0:23,0:23:69.24:0,69,1391	0/0:38,0:38:99:0,114,2216	0/0:30,0:30:90.29:0,90,1791	0/0:10,0:10:30.10:0,30,609
chr10	48046669	.	C	CTCTGTCTGTCTG	13841.07	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=6.695;DP=664;FS=6.279;HRun=0;HaplotypeScore=230.3838;InbreedingCoeff=0.8662;MQ=61.67;MQ0=0;MQRankSum=-11.036;QD=29.70;ReadPosRankSum=-0.915;VQSLOD=3.1740;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:37,0:37:30:615,30,0	0/0:21,0:21:42.14:0,42,1205	0/0:25,0:20:26.22:0,26,581	0/0:37,0:37:42.11:0,42,1025	1/1:26,0:26:18.24:312,18,0	0/0:21,0:21:33.11:0,33,1042	0/0:27,0:27:57.17:0,57,1655	0/0:30,0:30:42.06:0,42,952	1/1:22,0:22:23.11:1054,23,0	1/1:36,0:36:49.94:1822,50,0	1/1:16,0:16:6.11:18,6,0	1/1:29,0:29:31.26:1079,31,0	1/1:23,0:23:22.14:911,22,0	1/1:19,10:32:18.06:1053,18,0	0/0:36,0:36:81.26:0,81,2592	1/1:12,0:17:17.09:748,17,0	1/1:16,0:16:13.11:359,13,0	1/1:12,0:12:6.02:215,6,0	1/1:22,0:22:18.05:436,18,0	1/1:17,10:29:12.04:702,12,0	1/1:17,3:22:3.01:172,3,0	1/1:22,0:22:2.04:6,2,0	1/1:16,0:16:13.11:461,13,0	1/1:15,0:15:11.72:188,12,0	1/1:16,0:16:13.11:452,13,0	1/1:22,0:22:24.08:998,24,0	1/1:18,11:30:33.11:1791,33,0	1/1:6,0:6:9.03:450,9,0
chr10	48046673	.	G	GTCTGTCTGTCTGTCTA	19662.76	PASS	AB=1.000;AC=31;AF=0.596;AN=52;BaseQRankSum=-3.590;DP=777;FS=4.469;HRun=0;HaplotypeScore=267.4288;InbreedingCoeff=0.3850;MQ=59.06;MQ0=2;MQRankSum=-10.029;QD=38.48;ReadPosRankSum=4.373;VQSLOD=3.7564;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:36,0:36:16.92:348,0,17	0/0:21,0:21:57.11:0,57,1709	0/0:32,0:23:20.02:0,20,814	0/0:38,0:38:54.88:0,55,1515	1/1:5,21:32:8.95:472,9,0	0/0:21,0:21:45.08:0,45,1451	0/0:28,0:28:69.18:0,69,2303	0/0:30,0:30:65.89:0,66,1528	1/1:1,21:29:21.07:1609,21,0	1/1:11,24:49:94.95:4549,95,0	./.	1/1:4,27:40:24.08:1684,24,0	1/1:1,21:34:18.06:1379,18,0	0/1:31,0:31:66.89:686,0,67	0/0:37,0:37:99:0,99,3521	0/1:17,0:17:6.93:984,0,7	1/1:5,10:22:11.99:529,12,0	1/1:5,6:14:6.91:322,7,0	0/1:19,0:19:72.83:278,0,73	0/1:30,0:30:89.89:450,0,90	0/1:23,0:23:82.95:101,0,83	./.	1/1:1,13:24:9.03:689,9,0	1/1:8,6:22:4.51:233,5,0	1/1:1,15:22:9.03:678,9,0	1/1:6,16:32:72.08:2758,72,0	0/1:27,0:27:26.85:1224,0,27	1/1:0,6:8:9.03:690,9,0
chr10	48046697	.	G	GTCT	1095.77	PASS	AB=0.986;AC=17;AF=0.304;AN=56;BaseQRankSum=15.719;DP=674;FS=17.676;HRun=0;HaplotypeScore=171.9906;InbreedingCoeff=-0.4570;MQ=77.90;MQ0=2;MQRankSum=-13.789;QD=3.18;ReadPosRankSum=-0.209;VQSLOD=1.6867;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:24,11:35:56.52:235,0,57	0/0:20,0:20:57.19:0,57,989	0/0:39,0:30:80.33:0,80,1207	0/0:45,0:45:99:0,116,1786	0/1:25,0:25:57.68:58,0,457	0/0:19,0:19:51.17:0,51,884	0/0:31,0:31:93.28:0,93,1525	0/0:36,0:36:99:0,108,1766	0/1:25,0:25:63.39:63,0,333	0/0:37,0:37:32.06:0,32,1250	0/1:21,0:21:14.36:14,0,203	0/1:26,0:26:90.76:143,0,91	0/1:23,0:23:83.46:83,0,101	0/1:26,0:26:99:145,0,392	0/0:38,0:38:99:0,108,1913	0/1:13,0:13:73.50:74,0,174	0/1:20,0:20:10.73:11,0,317	0/1:9,0:9:11.69:12,0,120	0/0:11,0:11:0.54:0,1,415	0/1:27,0:27:82.07:82,0,485	0/0:26,0:26:36.04:0,36,517	0/1:13,0:13:8.92:9,0,81	0/1:18,0:18:55.26:55,0,111	0/1:22,0:22:29.33:29,0,201	0/1:15,0:15:38.19:38,0,196	0/0:27,0:27:1.94:0,2,783	0/1:20,0:20:99:174,0,349	0/1:7,0:7:25.30:25,0,75
chr10	48046698	.	G	GTCTGT	1737.13	PASS	AB=0.987;AC=18;AF=0.321;AN=56;BaseQRankSum=15.527;DP=680;FS=22.724;HRun=0;HaplotypeScore=189.9170;InbreedingCoeff=-0.4548;MQ=79.45;MQ0=2;MQRankSum=-14.049;QD=4.64;ReadPosRankSum=-0.048;VQSLOD=1.3216;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:24,11:35:16.84:374,0,17	0/0:19,0:19:57.13:0,57,1142	0/0:41,0:32:81.07:0,81,1403	0/0:45,0:45:99:0,125,2133	0/1:26,0:26:99:134,0,643	0/0:19,0:19:51.64:0,52,1088	0/0:30,0:30:90.27:0,90,1893	0/0:36,0:36:99:0,108,2217	0/1:25,0:25:76.54:77,0,391	0/0:38,0:38:28.32:0,28,1609	0/1:21,0:21:44.71:45,0,254	0/1:26,0:26:99:211,0,186	0/1:23,0:23:99:128,0,106	0/1:26,0:26:99:184,0,433	0/0:38,0:38:99:0,114,2434	0/1:13,0:13:93.08:93,0,267	0/1:20,0:20:39.73:40,0,352	0/1:9,0:9:15.84:16,0,162	0/0:12,0:12:15.33:0,15,564	0/1:27,0:27:99:109,0,652	0/0:28,0:28:38.87:0,39,678	0/1:13,0:13:20.69:21,0,112	0/1:18,0:18:90.85:91,0,128	0/1:22,0:22:61.35:61,0,314	0/1:16,0:16:71.92:72,0,290	0/1:27,0:27:1.42:1,0,1062	0/1:20,0:20:99:211,0,514	0/1:7,0:7:30.13:30,0,70
chr10	48050006	.	TAACAACAACAACAAC	T	6382.21	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=4.458;DP=591;FS=2.538;HRun=0;HaplotypeScore=258.4005;InbreedingCoeff=0.9151;MQ=57.52;MQ0=3;MQRankSum=-8.806;QD=46.59;ReadPosRankSum=1.066;VQSLOD=4.2935;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:40:63.22:0,63,2529	0/0:6,0:6:12.04:0,12,669	0/0:17,0:14:10.59:0,11,264	0/0:14,0:10:18.06:0,18,591	0/0:11,0:21:48.16:0,48,2521	0/0:31,0:31:66.23:0,66,4051	0/0:15,0:15:30.10:0,30,1680	0/0:22,0:29:42.14:0,42,1457	1/1:2,14:16:30.10:1183,30,0	0/0:11,0:22:42.14:0,42,2476	0/0:4,0:10:15.05:0,15,802	1/1:7,21:28:30.10:1158,30,0	1/1:7,23:30:39.60:1566,40,0	0/0:3,0:8:14.51:0,15,78	0/0:40,0:40:87.28:0,87,5744	0/0:10,0:25:42.14:0,42,2245	0/0:5,0:14:30.10:0,30,1656	0/0:15,0:24:38.18:0,38,1426	0/0:10,0:18:29.56:0,30,362	0/0:10,0:29:61.35:0,61,861	0/0:6,0:13:5.97:0,6,90	1/1:7,16:23:39.09:1266,39,0	1/1:11,13:24:30.02:1084,30,0	1/1:8,8:16:3:126,3,0	0/0:7,0:13:18.06:0,18,883	0/0:8,0:27:72.23:0,72,3944	0/0:9,0:32:55.42:0,55,430	0/0:6,0:6:15.05:0,15,907
chr10	48050236	.	A	ATGCC	6354.36	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-10.435;DP=612;FS=5.086;HRun=0;HaplotypeScore=99.2705;InbreedingCoeff=0.9956;MQ=75.36;MQ0=0;MQRankSum=-4.157;QD=49.26;ReadPosRankSum=-0.049;VQSLOD=5.3044;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:48.15:0,48,777	0/0:10,0:10:30.10:0,30,502	0/0:41,0:41:74.30:0,74,1239	0/0:28,0:28:48.16:0,48,721	0/0:21,0:21:54.18:0,54,897	0/0:23,0:23:63.22:0,63,1054	0/0:11,0:11:33.11:0,33,547	0/0:38,0:38:54.17:0,54,852	0/0:22,0:22:57.15:0,57,900	0/0:22,0:22:45.15:0,45,753	0/0:18,0:18:39.12:0,39,626	0/0:19,0:19:51.16:0,51,828	0/0:16,0:16:42.14:0,42,702	1/1:3,17:21:48.16:1179,48,0	0/0:28,0:28:75.26:0,75,1250	0/0:30,0:30:66.23:0,66,1102	0/0:18,0:18:45.15:0,45,749	0/0:8,0:8:18.06:0,18,301	1/1:8,5:13:21.05:462,21,0	1/1:8,14:24:39.09:871,39,0	1/1:7,27:36:78.27:1929,78,0	0/0:28,0:28:72.24:0,72,1170	0/0:14,0:14:30.09:0,30,473	0/0:10,0:10:21.07:0,21,351	0/0:32,0:32:69.22:0,69,1118	0/0:15,0:15:33.11:0,33,552	1/1:10,25:35:78.27:1914,78,0	0/0:11,0:11:27.09:0,27,451
chr10	48051105	.	G	GA	756.80	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-2.541;DP=483;FS=11.383;HRun=8;HaplotypeScore=67.8822;InbreedingCoeff=0.9741;MQ=92.73;MQ0=4;MQRankSum=-2.090;QD=21.02;ReadPosRankSum=-1.238;VQSLOD=2.7676;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,18:21:48.14:550,48,0	0/0:9,0:9:24.01:0,24,220	0/0:50,0:33:48.14:0,48,399	0/0:50,0:33:41.21:0,41,312	0/0:24,1:26:33.41:0,33,585	0/0:14,0:14:36:0,36,323	0/0:17,0:17:38.82:0,39,357	0/0:16,0:15:29.81:0,30,274	0/0:9,0:9:24.01:0,24,220	0/0:21,0:21:60.03:0,60,549	0/0:13,0:13:39.01:0,39,353	0/0:16,0:16:33:0,33,297	0/0:13,0:13:36.02:0,36,330	0/0:16,0:15:30.01:0,30,273	0/0:16,0:16:26.50:0,27,341	1/1:4,11:15:29.98:328,30,0	0/0:21,0:21:48.02:0,48,439	0/0:18,0:18:51.03:0,51,467	0/0:10,0:10:21.93:0,22,186	0/0:12,0:12:33.02:0,33,302	0/0:6,0:6:15:0,15,137	0/0:15,0:15:39.02:0,39,357	0/0:13,0:13:36.02:0,36,330	0/0:16,0:16:45.02:0,45,411	0/0:9,0:9:21.01:0,21,192	0/0:19,0:19:37.47:0,37,354	0/0:11,0:10:26.75:0,27,247	0/0:7,0:7:14.35:0,14,113
chr10	48051357	.	CCG	C	303.55	PASS	AB=0.983;AC=17;AF=0.327;AN=52;BaseQRankSum=2.003;DP=125;FS=8.293;HRun=0;HaplotypeScore=29.8596;InbreedingCoeff=0.2511;MQ=63.93;MQ0=0;MQRankSum=-1.129;QD=6.90;ReadPosRankSum=4.002;VQSLOD=1.1976;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:6:11.81:0,12,86	0/0:2,0:2:6:0,6,52	0/0:3,0:2:3.01:0,3,57	0/0:12,0:9:9.64:0,10,116	0/1:3,0:3:13.47:14,0,13	0/0:4,0:4:11.98:0,12,100	0/0:8,0:7:17.74:0,18,131	0/0:7,0:7:17.67:0,18,139	0/0:3,0:3:2.96:0,3,19	1/1:1,0:1:3:26,3,0	1/1:2,0:2:2.98:21,3,0	1/1:1,1:2:1.52:39,2,0	0/1:4,0:4:9.04:9,0,30	0/0:3,0:3:1.56:0,2,18	0/0:6,0:6:14.55:0,15,112	0/0:2,0:2:3:0,3,27	0/1:10,1:11:18.39:130,0,18	0/1:5,0:5:27.85:42,0,28	0/0:5,0:4:7.60:0,8,64	0/0:4,0:4:12:0,12,104	0/0:10,0:10:19.69:0,20,165	1/1:2,1:3:5.51:57,6,0	1/1:1,1:2:3.01:46,3,0	0/0:6,0:6:5.91:0,6,39	./.	0/1:5,0:5:10.50:30,0,11	1/1:6,0:6:11.53:43,12,0	./.
chr10	48051441	.	CTT	C	1028.18	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-3.810;DP=329;FS=1.539;HRun=13;HaplotypeScore=73.0009;InbreedingCoeff=0.9312;MQ=69.94;MQ0=7;MQRankSum=0.275;QD=16.58;ReadPosRankSum=-0.703;VQSLOD=2.6827;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:19:33.86:0,34,281	0/0:4,0:4:9.03:0,9,124	0/0:17,0:11:22.51:0,23,190	0/0:15,0:11:8.95:0,9,86	0/0:13,0:13:33.12:0,33,242	0/0:10,0:10:21.02:0,21,247	0/0:13,0:13:32.10:0,32,393	0/0:17,0:20:36.24:0,36,316	0/0:7,0:7:20.92:0,21,163	0/0:10,0:10:26.90:0,27,208	0/0:10,0:10:12.21:0,12,135	0/0:6,0:7:20.88:0,21,163	0/0:6,0:6:17.94:0,18,142	1/1:8,6:14:26.93:260,27,0	0/0:8,0:10:23.05:0,23,263	0/0:6,0:13:29.81:0,30,277	0/0:16,0:16:32.89:0,33,257	0/0:8,0:8:11.96:0,12,95	1/1:10,8:18:46.21:400,46,0	1/1:1,8:9:23.95:220,24,0	1/1:3,5:7:15.01:145,15,0	0/0:5,0:3:8.97:0,9,70	0/0:8,0:8:20.93:0,21,164	0/0:14,0:14:35.78:0,36,285	0/0:7,0:7:17.93:0,18,142	0/0:12,0:12:29.50:0,30,231	1/1:7,6:11:18.01:175,18,0	0/0:17,0:16:38.77:0,39,294
chr10	48051451	.	T	TC	4269.46	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=-8.113;DP=356;FS=1.182;HRun=0;HaplotypeScore=53.8513;InbreedingCoeff=0.9109;MQ=64.45;MQ0=19;MQRankSum=-1.268;QD=23.46;ReadPosRankSum=4.241;VQSLOD=6.3280;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:19:6.23:0,6,73	0/0:4,0:4:9.03:0,9,123	0/0:18,0:10:25.83:0,26,188	0/0:14,0:9:11.97:0,12,114	1/1:1,11:13:35.69:420,36,0	0/0:9,0:9:21.49:0,21,254	0/0:15,0:13:29.70:0,30,376	0/0:18,0:17:20.59:0,21,217	1/1:2,7:7:21.07:270,21,0	1/1:0,10:10:30.04:367,30,0	1/1:4,9:11:17.47:225,17,0	1/1:1,9:10:21.06:256,21,0	1/1:2,6:7:18.05:229,18,0	0/0:14,0:14:36.52:0,37,220	0/0:12,0:8:15.50:0,15,240	0/1:18,0:14:0.64:1,0,109	1/1:2,15:16:14.21:402,14,0	1/1:7,4:10:15.04:178,15,0	0/0:22,0:21:54.31:0,54,346	0/0:8,0:8:23.44:0,23,140	0/0:8,0:5:14.62:0,15,86	1/1:5,3:6:12.02:140,12,0	1/1:1,8:9:21.06:269,21,0	1/1:5,12:15:22.65:407,23,0	1/1:3,7:8:12.44:167,12,0	1/1:0,13:13:36.08:438,36,0	0/0:12,0:8:17.55:0,18,102	1/1:2,14:15:39.13:501,39,0
chr10	48052807	.	T	TG	1373.54	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-6.377;DP=599;FS=1.419;HRun=2;HaplotypeScore=56.9910;InbreedingCoeff=0.9680;MQ=83.93;MQ0=0;MQRankSum=-4.027;QD=37.12;ReadPosRankSum=1.922;VQSLOD=4.2840;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,36:37:99:1468,102,0	0/0:4,0:4:12.04:0,12,149	0/0:17,0:17:42.13:0,42,507	0/0:21,0:21:47.23:0,47,527	0/0:22,0:22:63.17:0,63,756	0/0:24,0:24:72.21:0,72,880	0/0:20,0:20:60.19:0,60,743	0/0:32,0:32:96.29:0,96,1170	0/0:23,0:23:69.22:0,69,854	0/0:17,0:17:51.16:0,51,633	0/0:11,0:11:33.10:0,33,409	0/0:13,0:13:36.11:0,36,446	0/0:27,0:27:78.25:0,78,967	0/0:20,0:20:57.18:0,57,706	0/0:21,0:21:60.19:0,60,743	0/0:22,0:22:66.19:0,66,806	0/0:32,0:32:93.29:0,93,1152	0/0:25,0:25:75.24:0,75,927	0/0:22,0:22:57.16:0,57,692	0/0:17,0:17:48.15:0,48,595	0/0:27,0:27:75.24:0,75,930	0/0:9,0:9:27.08:0,27,335	0/0:21,0:21:60.19:0,60,741	0/0:20,0:20:60.19:0,60,744	0/0:31,0:31:78.24:0,78,967	0/0:24,0:24:66.21:0,66,818	0/0:31,0:31:90.28:0,90,1116	0/0:9,0:9:27.08:0,27,325
chr10	48053627	.	A	ATTTGT	48812.55	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-11.331;DP=713;FS=5.127;HRun=0;HaplotypeScore=108.9329;InbreedingCoeff=0.9988;MQ=85.89;MQ0=0;MQRankSum=-9.541;QD=84.16;ReadPosRankSum=1.416;VQSLOD=6.8726;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,19:23:57.20:1761,57,0	0/0:10,0:10:27.09:0,27,586	0/0:25,0:24:60.17:0,60,1176	0/0:31,0:31:78.23:0,78,1623	1/1:1,30:34:90.27:2540,90,0	0/0:26,0:26:75.26:0,75,1629	0/0:9,0:9:21.07:0,21,456	1/1:15,23:42:99:3603,126,0	1/1:2,20:24:66.23:2092,66,0	1/1:7,27:36:99:3068,102,0	1/1:4,22:28:69.24:2121,69,0	1/1:8,19:28:78.27:2390,78,0	1/1:4,22:28:78.27:2446,78,0	1/1:0,23:25:69.24:2187,69,0	0/0:32,0:32:93.30:0,93,1980	1/1:4,33:41:99:3500,111,0	1/1:3,19:22:63.22:1953,63,0	1/1:1,9:10:30.10:951,30,0	1/1:2,14:16:48.16:1520,48,0	1/1:7,25:33:96.29:2891,96,0	1/1:2,11:14:36.12:1120,36,0	1/1:1,23:27:72.20:2163,72,0	1/1:3,20:25:63.22:1910,63,0	1/1:2,11:13:36.12:1141,36,0	1/1:8,19:27:75.26:2264,75,0	1/1:5,24:32:90.27:2643,90,0	1/1:6,21:28:72.25:2263,72,0	1/1:0,24:24:72.25:2284,72,0
chr10	48054214	.	TA	T	8691.32	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-0.129;DP=543;FS=2.875;HRun=11;HaplotypeScore=68.2289;InbreedingCoeff=0.9661;MQ=81.59;MQ0=0;MQRankSum=-3.072;QD=18.69;ReadPosRankSum=3.520;VQSLOD=5.9918;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,0:32:52.94:153,53,0	0/0:7,0:7:21.05:0,21,224	0/0:30,0:19:33.99:0,34,294	0/0:23,0:19:15.82:0,16,83	1/1:3,33:36:98.89:813,99,0	1/1:2,13:15:29.95:246,30,0	1/1:1,7:8:17.98:148,18,0	1/1:5,18:23:53.90:439,54,0	1/1:4,9:13:23.95:197,24,0	1/1:2,11:13:32.96:271,33,0	1/1:1,26:27:71.90:591,72,0	1/1:1,18:19:53.94:443,54,0	1/1:1,10:11:23.97:197,24,0	1/1:2,21:23:50.94:419,51,0	0/0:18,0:18:45.11:0,45,479	1/1:2,7:9:14.93:123,15,0	1/1:1,14:15:38.96:320,39,0	1/1:2,21:23:56.93:468,57,0	1/1:3,11:15:13.75:250,14,0	1/1:3,36:39:98.63:803,99,0	1/1:0,6:6:14.98:123,15,0	1/1:1,15:17:43.99:351,44,0	1/1:1,26:27:71.62:591,72,0	1/1:0,4:4:11.99:99,12,0	1/1:7,18:25:50.93:419,51,0	1/1:2,17:20:49.96:400,50,0	1/1:2,34:36:57.55:681,58,0	1/1:0,9:9:17.98:148,18,0
chr10	48057307	.	A	AGAT	26119.20	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=-11.577;DP=632;FS=2.305;HRun=0;HaplotypeScore=80.5220;InbreedingCoeff=0.9953;MQ=61.18;MQ0=0;MQRankSum=-5.096;QD=50.91;ReadPosRankSum=6.805;VQSLOD=6.5725;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,28:30:60.21:1359,60,0	0/0:9,0:9:24.08:0,24,394	0/0:11,0:11:28.91:0,29,445	0/0:7,0:7:15.04:0,15,207	1/1:3,29:32:72.25:1610,72,0	0/0:21,0:21:60.20:0,60,988	0/0:11,0:11:30.10:0,30,500	0/0:30,0:30:84.26:0,84,1305	1/1:4,9:13:21.07:475,21,0	1/1:6,20:28:78.27:1678,78,0	1/1:1,16:18:39.13:867,39,0	1/1:3,18:21:48.16:1087,48,0	1/1:3,24:27:66.23:1494,66,0	1/1:2,20:23:54.19:1222,54,0	0/0:30,0:30:84.24:0,84,1297	1/1:5,25:30:69.24:1539,69,0	1/1:2,20:23:51.17:1138,51,0	1/1:2,24:27:66.23:1496,66,0	1/1:4,13:18:54.17:1129,54,0	1/1:4,25:30:66.23:1494,66,0	1/1:3,14:18:27.09:611,27,0	1/1:2,22:25:54.19:1187,54,0	1/1:3,25:28:63.22:1410,63,0	1/1:4,10:14:30.10:674,30,0	1/1:5,26:31:69.24:1561,69,0	1/1:1,28:30:87.27:1834,87,0	1/1:7,29:37:75.04:1642,75,0	1/1:1,9:10:27.09:612,27,0
chr10	48058739	.	TG	T	1729.15	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=14.300;DP=673;FS=2.605;HRun=2;HaplotypeScore=94.3929;InbreedingCoeff=0.9582;MQ=86.94;MQ0=0;MQRankSum=-12.963;QD=16.95;ReadPosRankSum=0.855;VQSLOD=3.9077;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,117,1745	0/0:9,0:9:27.09:0,27,405	0/0:23,0:23:66.22:0,66,964	0/0:28,0:28:81.25:0,81,1133	0/0:47,0:47:99:0,138,2032	0/0:26,0:26:78.26:0,78,1165	0/0:25,0:25:75.25:0,75,1124	0/0:24,0:24:72.24:0,72,1069	0/0:16,0:16:48.16:0,48,719	0/0:41,0:41:99:0,120,1767	0/0:23,0:23:69.22:0,69,1015	0/0:21,0:21:60.20:0,60,886	0/0:25,0:25:75.25:0,75,1121	1/1:2,23:25:68.58:511,69,0	0/0:29,0:29:84.28:0,84,1236	0/0:21,0:21:63.21:0,63,928	0/0:28,0:28:84.26:0,84,1229	0/0:24,0:24:72.24:0,72,1079	1/1:7,11:18:32.95:282,33,0	1/1:3,22:25:65.61:478,66,0	1/1:2,9:11:17.92:147,18,0	0/0:20,0:20:60.20:0,60,884	0/0:27,0:27:78.25:0,78,1140	0/0:27,0:27:78.26:0,78,1169	0/0:19,0:18:57.18:0,57,830	0/0:27,0:27:81.27:0,81,1209	1/1:7,16:23:59.82:485,60,0	0/0:1,0:1:3.01:0,3,45
chr10	48058742	.	AGAGCTCTG	A	5755.57	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=14.414;DP=651;FS=4.776;HRun=0;HaplotypeScore=174.9059;InbreedingCoeff=0.9593;MQ=87.43;MQ0=0;MQRankSum=-13.272;QD=70.19;ReadPosRankSum=1.241;VQSLOD=4.8686;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,123,5182	0/0:10,0:10:30.10:0,30,1332	0/0:21,0:21:63.21:0,63,2505	0/0:28,0:28:80.64:0,81,2903	0/0:44,0:44:99:0,132,5757	0/0:27,0:27:81.26:0,81,3601	0/0:25,0:25:75.26:0,75,3255	0/0:25,0:25:75.25:0,75,3300	0/0:16,0:16:48.16:0,48,2029	0/0:40,0:40:99:0,120,5319	0/0:26,0:26:78.25:0,78,3395	0/0:20,0:20:60.21:0,60,2735	0/0:26,0:26:78.27:0,78,3589	1/1:1,22:23:69.22:1636,69,0	0/0:29,0:29:87.28:0,87,3872	0/0:22,0:22:66.21:0,66,2927	0/0:28,0:28:84.27:0,84,3630	0/0:24,0:24:72.25:0,72,3079	1/1:1,9:10:30.10:774,30,0	1/1:0,22:22:66.23:1618,66,0	1/1:3,6:9:21.07:446,21,0	0/0:20,0:20:60.21:0,60,2746	0/0:24,0:24:72.25:0,72,3231	0/0:27,0:27:78.25:0,78,3265	0/0:17,0:16:51.18:0,51,2281	0/0:28,0:28:84.28:0,84,3725	1/1:2,16:18:54.19:1282,54,0	0/0:1,0:1:3.01:0,3,92
chr10	48060855	.	C	CA	1602.53	PASS	AB=0.943;AC=18;AF=0.321;AN=56;BaseQRankSum=4.980;DP=571;FS=0.000;HRun=9;HaplotypeScore=146.3249;InbreedingCoeff=0.5281;MQ=65.82;MQ0=1;MQRankSum=-3.467;QD=6.44;ReadPosRankSum=-4.341;VQSLOD=-0.1527;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,0:16:23.24:127,23,0	0/1:7,1:8:12.18:12,0,135	0/0:26,0:22:35.20:0,35,264	0/0:26,0:22:32.18:0,32,280	0/1:30,4:34:40.13:40,0,189	0/0:19,0:19:50.98:0,51,443	0/0:17,0:17:41.99:0,42,364	0/0:24,0:24:47.96:0,48,411	0/0:22,0:22:44.98:0,45,395	0/1:24,0:24:19.30:19,0,106	0/1:19,2:21:41.32:41,0,82	0/0:28,0:28:35.98:0,36,312	0/0:14,0:14:16.24:0,16,273	1/1:15,1:17:20.88:146,21,0	0/0:21,0:22:50:0,50,418	0/1:18,0:18:0.26:0,0,1	0/0:27,1:28:4.70:0,5,194	0/0:19,0:19:8.96:0,9,148	1/1:10,6:17:27.81:259,28,0	1/1:7,20:27:56.79:508,57,0	1/1:10,6:16:18.32:197,18,0	0/0:11,0:11:23.99:0,24,209	0/0:15,0:15:35.97:0,36,313	0/0:19,0:19:35.94:0,36,305	0/0:24,1:24:11.96:0,12,227	0/1:23,1:24:25.39:25,0,109	1/1:18,8:25:39.71:419,40,0	0/0:6,0:6:14.65:0,15,89
chr10	48060881	.	A	AAAAG	11287.71	PASS	AB=0.938;AC=30;AF=0.536;AN=56;BaseQRankSum=2.337;DP=522;FS=0.856;HRun=0;HaplotypeScore=151.6292;InbreedingCoeff=0.8146;MQ=50.67;MQ0=3;MQRankSum=-9.422;QD=38.13;ReadPosRankSum=0.614;VQSLOD=5.1982;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:18,0:20:98.19:118,0,98	0/0:9,0:9:21.06:0,21,330	0/0:26,0:14:17.14:0,17,157	0/0:26,0:15:7.82:0,8,94	1/1:16,11:27:66.21:1398,66,0	0/0:18,0:18:48.14:0,48,750	0/0:13,0:13:24.07:0,24,380	0/0:18,0:18:31.61:0,32,455	1/1:12,6:18:36.08:843,36,0	1/1:17,9:26:66.22:1461,66,0	1/1:11,5:16:42.09:817,42,0	1/1:6,19:25:24.08:592,24,0	1/1:9,5:14:36.12:802,36,0	0/1:11,0:11:8.41:8,0,97	0/0:20,0:20:42.13:0,42,675	0/0:20,0:20:44.74:0,45,523	1/1:22,4:26:39.06:759,39,0	1/1:16,7:23:42.27:702,42,0	0/0:13,0:13:26.28:0,26,341	0/0:23,0:23:43.78:0,44,491	0/0:15,0:15:32.88:0,33,340	1/1:6,5:10:27.08:532,27,0	1/1:6,6:12:21.07:494,21,0	1/1:6,8:15:0.73:141,1,0	1/1:20,9:28:69.04:1366,69,0	1/1:8,10:18:39.61:962,40,0	0/0:25,0:24:21.88:0,22,302	1/1:2,2:4:12.04:292,12,0
chr10	48060894	.	AAAGG	A	4594.07	PASS	AB=0.916;AC=16;AF=0.286;AN=56;BaseQRankSum=3.741;DP=501;FS=1.680;HRun=0;HaplotypeScore=161.2435;InbreedingCoeff=-0.2230;MQ=50.24;MQ0=2;MQRankSum=-8.234;QD=16.77;ReadPosRankSum=3.019;VQSLOD=4.8501;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:22:6.47:6,0,285	0/0:8,0:8:24.07:0,24,573	0/0:18,0:7:14.65:0,15,174	0/0:17,0:6:7.82:0,8,131	0/1:24,5:29:88.20:702,0,88	0/0:18,0:18:54.12:0,54,1225	0/0:13,0:13:30.07:0,30,609	0/0:23,0:23:63.15:0,63,1075	0/1:14,3:17:99:313,0,104	0/1:20,6:26:99:570,0,225	0/1:11,4:15:71.71:431,0,72	0/1:19,0:19:71.08:173,0,71	0/1:12,2:14:36.40:397,0,36	0/0:12,0:12:21.07:0,21,519	0/0:19,0:19:48.15:0,48,1188	0/0:23,0:23:32.20:0,32,1251	0/1:25,3:28:99:237,0,143	0/1:22,1:23:99:335,0,195	0/0:14,0:14:26.76:0,27,777	0/0:22,0:22:27.95:0,28,1149	0/0:16,0:16:32.92:0,33,675	0/1:12,0:11:99:117,0,122	0/1:12,0:12:94.01:247,0,94	0/1:10,0:10:10.82:33,0,11	0/1:20,5:24:99:559,0,108	0/1:16,1:17:57.90:315,0,58	0/0:24,0:24:51.14:0,51,1151	1/1:2,2:4:12.03:161,12,0
chr10	48060906	.	G	GAAGA	14866.76	PASS	AB=1.000;AC=43;AF=0.768;AN=56;BaseQRankSum=6.371;DP=484;FS=2.298;HRun=0;HaplotypeScore=118.4068;InbreedingCoeff=0.9052;MQ=53.82;MQ0=2;MQRankSum=-7.070;QD=38.42;ReadPosRankSum=3.300;VQSLOD=4.8166;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,5:18:23.87:378,24,0	0/0:8,0:8:21.06:0,21,336	0/0:11,0:4:2.98:0,3,51	0/1:13,0:5:2.51:3,0,3	1/1:10,17:28:61.74:1182,62,0	0/0:19,0:19:51.16:0,51,830	0/0:12,0:12:21.04:0,21,306	0/0:30,0:30:66.20:0,66,1040	1/1:7,12:19:28.87:615,29,0	1/1:7,17:25:68.68:1246,69,0	1/1:6,9:15:38.98:690,39,0	1/1:12,6:18:33.10:646,33,0	1/1:11,6:17:42.05:718,42,0	1/1:1,9:10:21.06:480,21,0	0/0:17,0:17:48.16:0,48,823	1/1:12,10:22:54.18:1234,54,0	1/1:7,17:24:29.97:671,30,0	1/1:8,12:23:26.99:587,27,0	1/1:9,5:14:30.10:633,30,0	1/1:11,8:19:45.15:963,45,0	1/1:1,14:15:21.07:454,21,0	1/1:2,9:10:27.09:650,27,0	1/1:4,8:13:24.08:462,24,0	1/1:6,3:9:13.59:150,14,0	1/1:9,14:23:42.03:894,42,0	1/1:13,6:19:49.10:970,49,0	1/1:4,20:24:42.14:964,42,0	1/1:7,0:7:18.04:275,18,0
chr10	48061090	.	TAAAAACTTAAAAAA	T	507.15	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.768;DP=494;FS=1.737;HRun=0;HaplotypeScore=185.0008;InbreedingCoeff=0.9725;MQ=65.94;MQ0=0;MQRankSum=-3.724;QD=36.23;ReadPosRankSum=0.612;VQSLOD=3.3754;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,13:14:15.05:596,15,0	0/0:9,0:9:27.09:0,27,1555	0/0:9,0:9:24.08:0,24,1318	0/0:7,0:7:21.07:0,21,1076	0/0:29,0:29:78.23:0,78,4341	0/0:20,0:20:60.19:0,60,3314	0/0:9,0:9:24.07:0,24,1481	0/0:38,0:38:99:0,102,4553	0/0:12,0:12:36.12:0,36,2153	0/0:23,0:23:63.22:0,63,4081	0/0:30,0:30:90.29:0,90,4485	0/0:16,0:16:48.12:0,48,2657	0/0:19,0:19:54.19:0,54,3339	0/0:16,0:16:45.15:0,45,2723	0/0:27,0:27:78.25:0,78,4997	0/0:11,0:11:30.08:0,30,1238	0/0:17,0:17:51.18:0,51,3137	0/0:12,0:12:36.12:0,36,2365	0/0:19,0:19:51.16:0,51,2428	0/0:27,0:27:78.25:0,78,4067	0/0:9,0:9:27.09:0,27,1818	0/0:11,0:11:33.07:0,33,1808	0/0:11,0:11:33.10:0,33,2028	0/0:11,0:10:33.10:0,33,1995	0/0:21,0:21:54.19:0,54,3513	0/0:20,0:20:57.20:0,57,3769	0/0:29,0:29:72.15:0,72,3455	0/0:18,0:18:54.19:0,54,3419
chr10	48061098	.	T	TA	1056.36	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-7.931;DP=493;FS=3.015;HRun=9;HaplotypeScore=49.4947;InbreedingCoeff=0.9720;MQ=65.17;MQ0=0;MQRankSum=1.505;QD=19.93;ReadPosRankSum=-5.429;VQSLOD=1.7857;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:11.72:0,12,42	0/0:8,0:8:20.99:0,21,182	0/0:8,0:8:23.20:0,23,184	0/0:9,0:8:23.94:0,24,196	0/0:29,0:30:73.99:0,74,625	0/0:19,0:19:47.97:0,48,413	0/0:9,0:9:26.98:0,27,231	1/1:13,30:44:72.96:977,73,0	0/0:15,0:15:41.97:0,42,361	0/0:24,0:24:65.96:0,66,566	0/0:29,0:29:53.95:0,54,465	0/0:15,0:15:41.99:0,42,365	0/0:19,0:19:53.96:0,54,464	0/0:15,0:15:35.99:0,36,313	0/0:26,0:26:77.97:0,78,674	1/1:2,7:9:18.05:199,18,0	0/0:17,0:17:41.99:0,42,365	0/0:14,0:14:38.97:0,39,334	0/0:17,0:17:35.98:0,36,313	0/0:27,0:27:65.87:0,66,557	0/0:8,0:10:25.06:0,25,194	0/0:11,0:11:26.97:0,27,231	0/0:13,0:13:32.94:0,33,279	0/0:10,0:9:26.99:0,27,234	0/0:22,0:22:56.94:0,57,488	0/0:21,0:21:59.99:0,60,521	0/0:21,0:21:56.96:0,57,488	0/0:18,0:18:53.99:0,54,469
chr10	48061415	.	CTT	C	3864.76	PASS	AB=0.660;AC=36;AF=0.643;AN=56;BaseQRankSum=-3.377;DP=534;FS=3.247;HRun=15;HaplotypeScore=73.8281;InbreedingCoeff=0.7671;MQ=62.50;MQ0=4;MQRankSum=3.907;QD=10.86;ReadPosRankSum=5.424;VQSLOD=2.6285;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,1:31:17.42:0,17,294	0/0:9,0:10:11.32:0,11,97	0/0:15,0:9:16.08:0,16,90	0/0:14,0:9:7.32:0,7,78	1/1:5,13:18:20.84:229,21,0	0/0:16,0:17:34.48:0,34,379	0/0:21,0:23:25.02:0,25,245	0/0:34,0:34:52.97:0,53,521	1/1:6,12:20:27.75:231,28,0	1/1:10,4:14:17.68:140,18,0	1/1:9,6:17:5.67:129,6,0	1/1:8,0:8:5.75:49,6,0	1/1:2,10:12:11.93:105,12,0	1/1:9,9:20:6.07:119,6,0	0/0:17,0:19:43.67:0,44,443	0/0:8,0:12:20.35:0,20,101	1/1:10,19:33:23.73:362,24,0	1/1:10,11:20:36.03:320,36,0	1/1:13,9:21:24.77:262,25,0	0/1:13,4:20:23.60:146,0,24	1/1:2,7:9:20.14:183,20,0	1/1:6,9:16:17.59:141,18,0	1/1:8,13:21:22.51:203,23,0	1/1:3,17:20:38.02:322,38,0	1/1:8,14:23:7.52:192,8,0	1/1:13,14:27:34.63:361,35,0	1/1:14,8:21:36.14:245,36,0	0/1:3,7:11:7.52:126,0,8
chr10	48063618	.	C	CA	2012.31	PASS	AB=0.966;AC=20;AF=0.357;AN=56;BaseQRankSum=3.083;DP=561;FS=6.428;HRun=8;HaplotypeScore=146.5457;InbreedingCoeff=0.0943;MQ=40.74;MQ0=32;MQRankSum=-5.082;QD=6.27;ReadPosRankSum=0.351;VQSLOD=0.4207;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:21:22.43:0,22,138	0/0:9,0:8:8.86:0,9,83	0/0:11,0:6:17.97:0,18,154	0/1:7,0:4:4.65:5,0,23	0/1:35,0:34:86.43:86,0,105	0/0:14,0:13:32.18:0,32,300	0/0:14,0:14:30.94:0,31,280	0/0:22,0:19:57.03:0,57,521	0/0:26,0:22:8.16:0,8,93	0/1:27,1:27:45.58:152,0,46	0/1:29,0:27:64.80:96,0,65	0/1:13,0:13:3.07:3,0,40	0/1:27,0:24:44.55:45,0,111	1/1:15,4:18:26.88:231,27,0	0/0:16,0:13:6.05:0,6,146	0/0:30,0:30:47.21:0,47,418	0/0:24,0:22:3.48:0,3,130	0/0:13,0:10:7.25:0,7,38	1/1:7,5:10:15.83:172,16,0	1/1:16,16:30:43.60:565,44,0	0/1:4,2:4:6.55:79,0,7	0/1:11,0:11:13:13,0,47	0/1:15,1:13:29.57:30,0,34	0/1:15,1:13:9.60:18,0,10	0/1:24,0:20:46.47:75,0,46	0/0:38,0:34:17.30:0,17,223	1/1:16,16:30:53.33:568,53,0	0/1:14,0:8:5.59:52,0,6
chr10	48063622	.	A	AC	1261.90	PASS	AB=0.935;AC=18;AF=0.321;AN=56;BaseQRankSum=4.982;DP=543;FS=8.999;HRun=0;HaplotypeScore=143.9240;InbreedingCoeff=-0.2684;MQ=42.98;MQ0=27;MQRankSum=-1.906;QD=3.52;ReadPosRankSum=1.461;VQSLOD=3.0482;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:18:41.66:0,42,445	0/0:9,0:8:23.43:0,23,218	0/0:11,0:6:18.06:0,18,247	0/0:8,0:5:11.34:0,11,130	0/1:26,4:31:50.85:198,0,51	0/0:14,0:13:39.03:0,39,504	0/0:16,0:16:44.94:0,45,528	0/0:24,0:21:63.20:0,63,854	0/0:24,1:22:1.72:0,2,130	0/1:20,5:25:41.39:274,0,41	0/1:21,5:25:3.79:240,0,4	0/1:10,2:12:18.36:18,0,41	0/1:25,1:24:42.07:42,0,145	0/1:19,0:18:5.73:6,0,131	0/0:16,0:13:35.69:0,36,368	0/0:30,0:30:57.64:0,58,739	0/1:20,1:20:1.16:1,0,108	0/0:11,1:10:17.10:0,17,87	0/1:15,0:13:23.92:24,0,72	0/1:34,0:32:86.18:86,0,180	1/1:5,0:4:3.01:18,3,0	0/1:11,1:12:41.06:41,0,55	0/1:12,2:12:35.22:50,0,35	0/1:14,0:12:11.75:12,0,26	0/1:20,3:20:30.11:135,0,30	0/1:30,0:28:41.59:99,0,42	0/1:32,0:30:24.53:95,0,25	0/1:14,1:9:3.61:76,0,4
chr10	48063626	.	AC	A	3042.09	PASS	AB=1.000;AC=39;AF=0.696;AN=56;BaseQRankSum=9.201;DP=495;FS=0.411;HRun=1;HaplotypeScore=126.2166;InbreedingCoeff=0.5918;MQ=45.26;MQ0=21;MQRankSum=-4.842;QD=8.03;ReadPosRankSum=-0.384;VQSLOD=0.5276;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:19:0.48:0,0,85	0/0:7,0:6:0.06:0,0,94	0/0:11,0:6:17.92:0,18,191	0/0:8,0:5:3.55:0,4,68	1/1:26,2:27:30.71:243,31,0	0/0:13,0:12:10.76:0,11,331	0/1:16,0:16:24.12:24,0,356	0/0:28,0:26:78.14:0,78,846	1/1:24,1:23:37.69:291,38,0	1/1:25,1:26:44.04:350,44,0	1/1:25,0:24:29.65:261,30,0	1/1:12,0:12:22.47:113,22,0	1/1:26,1:25:44.70:227,45,0	1/1:12,0:11:24.50:118,25,0	0/1:17,0:14:46.55:47,0,245	0/0:29,0:29:55.76:0,56,597	1/1:18,0:18:8.84:95,9,0	1/1:10,0:9:12.40:61,12,0	1/1:12,0:11:20.03:118,20,0	1/1:24,0:23:37.81:215,38,0	0/1:5,0:4:16.49:21,0,16	1/1:14,0:14:12.70:145,13,0	1/1:11,0:10:19.82:96,20,0	1/1:12,0:11:15.27:84,15,0	1/1:18,0:16:25.18:134,25,0	1/1:29,0:28:47.86:228,48,0	1/1:25,0:25:48.86:225,49,0	1/1:12,1:8:14.29:129,14,0
chr10	48063627	.	C	CA	2291.63	PASS	AB=0.983;AC=21;AF=0.375;AN=56;BaseQRankSum=0.398;DP=493;FS=1.479;HRun=8;HaplotypeScore=129.5070;InbreedingCoeff=0.2808;MQ=45.81;MQ0=16;MQRankSum=-1.529;QD=8.85;ReadPosRankSum=-2.434;VQSLOD=1.0744;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,15:18:39.11:447,39,0	0/0:7,0:6:7.56:0,8,80	0/0:11,0:6:17.93:0,18,152	0/0:8,0:5:8.52:0,9,73	0/0:27,0:27:24.04:0,24,179	0/0:13,0:12:25.72:0,26,225	0/0:16,0:16:32.13:0,32,323	0/0:28,0:26:71.99:0,72,645	0/1:24,0:22:20.47:20,0,83	0/1:26,0:26:41.26:41,0,52	0/1:24,0:25:11.80:12,0,108	0/1:12,0:12:23.04:26,0,23	0/1:27,0:25:29.71:30,0,113	1/1:8,4:11:26.40:263,26,0	0/0:17,0:14:13.94:0,14,223	0/0:30,0:30:56.88:0,57,505	0/0:19,0:19:16.39:0,16,141	0/0:10,0:9:7.38:0,7,39	1/1:3,9:12:27.08:310,27,0	1/1:10,15:24:60.12:652,60,0	1/1:1,3:4:4.46:93,4,0	0/1:14,0:14:10.39:10,0,54	0/1:10,0:10:18.82:19,0,45	0/1:12,0:11:10.78:11,0,22	0/0:17,0:17:1.42:0,1,60	0/0:29,0:28:37.34:0,37,297	1/1:2,23:25:47.84:542,48,0	0/1:11,0:8:0.46:0,0,10
chr10	48064120	.	ATATAT	A	418.79	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=4.994;DP=298;FS=0.000;HRun=0;HaplotypeScore=54.6032;InbreedingCoeff=0.5436;MQ=79.23;MQ0=0;MQRankSum=-2.387;QD=19.04;ReadPosRankSum=0.727;VQSLOD=2.8488;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:39.13:0,39,1169	0/0:7,0:7:21.07:0,21,619	0/1:10,0:9:8.44:8,0,68	0/0:14,0:11:17.66:0,18,263	0/0:17,0:17:48.16:0,48,1452	0/0:19,0:19:54.19:0,54,1575	0/0:5,0:5:15.04:0,15,341	0/0:44,0:44:99:0,129,3567	0/0:4,0:4:12.04:0,12,331	0/0:16,0:16:39.12:0,39,1133	0/0:5,0:5:12.04:0,12,369	0/0:7,0:7:18.06:0,18,506	0/0:5,0:5:12.04:0,12,368	0/0:9,0:9:21.07:0,21,615	0/0:10,0:10:27.07:0,27,649	1/1:1,11:12:27.09:511,27,0	0/0:9,0:9:27.09:0,27,793	0/0:9,0:9:24.08:0,24,738	0/0:9,0:9:27.09:0,27,762	0/0:9,0:9:21.06:0,21,516	0/0:6,0:6:18.06:0,18,552	0/0:2,0:2:6.02:0,6,152	0/0:9,0:9:21.07:0,21,552	0/0:3,0:3:9.02:0,9,209	0/0:8,0:8:21.07:0,21,646	0/0:11,0:11:30.09:0,30,824	0/0:16,0:15:45.13:0,45,1232	0/0:10,0:10:30.10:0,30,809
chr10	48064187	.	TATAC	T	1247.51	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.512;DP=379;FS=0.765;HRun=0;HaplotypeScore=64.0496;InbreedingCoeff=0.8196;MQ=76.44;MQ0=1;MQRankSum=-1.709;QD=29.01;ReadPosRankSum=-3.946;VQSLOD=2.2799;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:60.15:0,60,1354	0/0:7,0:7:18.06:0,18,457	0/0:16,0:12:25.87:0,26,383	0/0:19,0:16:25.90:0,26,449	0/0:22,0:22:63.18:0,63,1429	0/0:16,0:16:45.15:0,45,1137	0/0:10,0:10:27.08:0,27,587	1/1:14,29:43:87.23:1342,87,0	0/0:6,0:6:18.06:0,18,457	0/0:19,0:19:57.19:0,57,1314	0/0:13,0:13:36.12:0,36,914	0/0:8,0:8:24.08:0,24,583	0/0:11,0:11:33.11:0,33,837	0/0:9,0:9:21.07:0,21,533	0/0:12,0:12:36.12:0,36,908	0/0:8,0:8:18.06:0,18,457	0/0:21,0:21:60.21:0,60,1485	0/0:9,0:9:15.05:0,15,345	0/0:16,0:15:36.12:0,36,888	0/0:12,0:12:36.12:0,36,867	0/0:10,0:10:30.10:0,30,742	0/0:2,0:2:6.02:0,6,152	0/0:4,0:4:12.04:0,12,299	0/0:6,0:6:15.05:0,15,381	0/0:15,0:15:45.15:0,45,1143	0/0:17,0:17:45.14:0,45,1061	0/0:22,0:21:63.20:0,63,1541	0/0:5,0:5:15.05:0,15,381
chr10	48066655	.	TA	T	10141.24	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=8.685;DP=587;FS=0.412;HRun=10;HaplotypeScore=65.2819;InbreedingCoeff=0.9963;MQ=69.90;MQ0=0;MQRankSum=-3.793;QD=21.49;ReadPosRankSum=1.162;VQSLOD=5.7521;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,17:17:44.99:391,45,0	0/0:12,0:12:30.08:0,30,331	0/0:15,1:16:16.65:0,17,267	0/0:17,0:18:27.63:0,28,324	1/1:3,39:42:99:900,110,0	0/0:23,0:23:63.12:0,63,677	0/0:13,0:13:39.07:0,39,420	1/1:4,35:39:99:887,105,0	1/1:1,21:22:53.65:468,54,0	1/1:1,18:19:53.97:466,54,0	1/1:3,18:21:50.74:416,51,0	1/1:3,17:21:44.02:371,44,0	1/1:2,22:24:65.98:573,66,0	1/1:2,9:11:20.99:182,21,0	0/0:33,0:33:90.24:0,90,996	1/1:4,20:24:47.99:417,48,0	1/1:4,27:31:83.96:725,84,0	1/1:0,12:12:35.99:312,36,0	1/1:3,25:28:74.91:633,75,0	1/1:2,25:27:71.78:601,72,0	1/1:1,10:11:29.99:260,30,0	1/1:1,11:12:29.79:247,30,0	1/1:1,20:21:59.98:521,60,0	1/1:2,14:16:35.98:312,36,0	1/1:2,22:24:44.99:391,45,0	1/1:1,16:17:47.99:417,48,0	1/1:4,16:20:41.99:365,42,0	1/1:2,11:13:32.98:286,33,0
chr10	48067660	.	TACACAC	T	555.02	PASS	AB=0.946;AC=22;AF=0.647;AN=34;BaseQRankSum=3.587;DP=468;FS=3.310;HRun=0;HaplotypeScore=101.7315;InbreedingCoeff=0.2438;MQ=54.78;MQ0=39;MQRankSum=-3.512;QD=3.34;ReadPosRankSum=-1.095;VQSLOD=1.8657;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/0:10,0:10:3.01:0,3,65	./.	./.	./.	0/0:22,0:22:12.02:0,12,261	0/0:18,0:18:6.94:0,7,120	./.	1/1:17,0:17:2.52:20,3,0	./.	1/1:11,0:11:3.01:44,3,0	1/1:9,0:10:2.90:42,3,0	1/1:13,0:14:6.01:70,6,0	1/1:9,0:9:0.05:0,0,0	0/1:22,0:24:52.63:53,0,243	0/1:17,0:17:15.18:15,0,23	1/1:11,1:10:6.02:100,6,0	1/1:10,1:9:3.01:60,3,0	1/1:14,2:16:9.03:161,9,0	1/1:9,0:10:3.01:42,3,0	./.	0/0:9,0:10:0:0,0,0	./.	./.	./.	0/0:13,0:11:0:0,0,0	1/1:6,2:8:3.01:59,3,0	./.
chr10	48067734	.	G	GTCTCTCTCTCTCTC	5422.30	PASS	AB=0.821;AC=37;AF=0.712;AN=52;BaseQRankSum=3.225;DP=818;FS=16.649;HRun=0;HaplotypeScore=208.6751;InbreedingCoeff=0.4501;MQ=54.61;MQ0=39;MQRankSum=-4.461;QD=7.90;ReadPosRankSum=-3.253;VQSLOD=2.2582;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:8,0:36:6.02:282,6,0	0/0:4,0:4:6.02:0,6,239	0/1:129,0:27:1.80:2,0,52	0/1:148,0:39:17.37:17,0,456	0/0:4,0:18:0.47:0,0,1	0/0:25,0:25:37.19:0,37,1070	0/0:25,0:26:25.91:0,26,1315	0/1:36,0:36:17.23:17,0,884	1/1:3,0:21:3.01:183,3,0	1/1:5,0:21:36.99:873,37,0	1/1:3,0:20:0.28:0,0,0	./.	1/1:6,0:21:9.03:538,9,0	./.	0/0:21,0:22:32.74:0,33,1171	1/1:19,0:19:18.02:433,18,0	1/1:7,0:17:14.02:335,14,0	1/1:6,0:6:0.47:1,0,0	1/1:30,0:28:41.24:1012,41,0	1/1:3,1:23:2.32:143,2,0	1/1:13,19:41:6.42:59,6,0	1/1:15,0:15:6.39:66,6,0	0/1:3,0:18:0:0,0,0	1/1:24,0:24:24.33:323,24,0	0/1:3,0:14:0:0,0,0	1/1:1,0:22:51.44:1037,51,0	1/1:7,7:16:4.26:79,4,0	1/1:3,0:5:2.47:21,2,0
chr10	48068116	.	TA	T	1816.94	PASS	AB=0.882;AC=17;AF=0.304;AN=56;BaseQRankSum=9.772;DP=399;FS=2.661;HRun=11;HaplotypeScore=48.0298;InbreedingCoeff=0.5634;MQ=65.55;MQ0=0;MQRankSum=1.007;QD=11.65;ReadPosRankSum=3.475;VQSLOD=3.0215;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,15:19:21.86:278,22,0	0/0:3,0:3:3.01:0,3,32	0/1:8,0:7:2.22:2,0,26	0/0:7,0:7:8.97:0,9,80	0/0:23,1:24:38.50:0,38,593	0/0:7,0:7:12.03:0,12,128	0/0:15,0:15:42.11:0,42,448	0/0:32,0:32:72.16:0,72,750	0/1:13,2:15:4.18:4,0,370	0/0:21,1:22:23.46:0,23,445	0/0:21,2:23:1.80:0,2,418	0/0:6,0:6:18.03:0,18,185	0/0:10,0:10:30.08:0,30,320	1/1:0,12:13:35.95:296,36,0	0/0:7,0:7:15.01:0,15,145	0/0:15,0:15:42.07:0,42,426	0/0:21,1:22:41.47:0,41,620	0/1:8,2:9:25.23:25,0,157	1/1:4,17:21:47.91:394,48,0	1/1:1,15:17:43.99:351,44,0	1/1:1,7:8:20.97:172,21,0	0/0:8,0:8:21.05:0,21,224	0/0:16,1:17:20.46:0,20,415	0/1:4,2:6:31.04:31,0,110	0/0:20,0:20:51.13:0,51,544	0/1:16,1:17:7.12:7,0,342	1/1:2,20:22:53.93:443,54,0	0/0:5,0:5:15.04:0,15,160
chr10	48069880	.	C	CAAG	8010.41	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-13.515;DP=673;FS=2.187;HRun=0;HaplotypeScore=85.0926;InbreedingCoeff=0.9959;MQ=85.82;MQ0=0;MQRankSum=-3.391;QD=50.07;ReadPosRankSum=3.405;VQSLOD=6.8075;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,29:36:60.12:1248,60,0	0/0:13,0:13:39.10:0,39,587	0/0:26,0:26:69.10:0,69,1080	0/0:20,0:20:51.17:0,51,785	0/0:36,0:36:99:0,99,1586	0/0:26,0:26:75.23:0,75,1196	0/0:24,0:24:69.22:0,69,1092	0/0:41,0:41:99:0,111,1718	0/0:22,0:22:60.20:0,60,977	0/0:26,0:26:78.25:0,78,1225	0/0:29,0:29:78.24:0,78,1220	0/0:19,0:19:48.16:0,48,781	0/0:24,0:24:66.23:0,66,1074	1/1:2,21:23:51.18:1126,51,0	0/0:31,0:31:93.29:0,93,1467	0/0:30,0:30:87.29:0,87,1390	0/0:27,0:27:81.28:0,81,1319	0/0:5,0:5:15.05:0,15,245	1/1:1,19:20:57.15:1216,57,0	1/1:2,23:25:63.22:1405,63,0	1/1:2,22:25:59.87:1223,60,0	0/0:28,0:28:81.28:0,81,1318	0/0:25,0:25:69.19:0,69,1050	0/0:19,0:19:51.17:0,51,826	0/0:12,0:12:33.06:0,33,484	0/0:23,0:23:63.21:0,63,1003	1/1:0,31:31:81.28:1794,81,0	0/0:7,0:7:21.05:0,21,313
chr10	48070521	.	T	TAA	5476.64	PASS	AB=0.950;AC=43;AF=0.768;AN=56;BaseQRankSum=11.607;DP=304;FS=23.908;HRun=2;HaplotypeScore=137.0438;InbreedingCoeff=0.8175;MQ=71.24;MQ0=9;MQRankSum=-11.047;QD=29.13;ReadPosRankSum=1.959;VQSLOD=3.2520;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,0:6:18.01:258,18,0	0/0:8,0:8:24.08:0,24,353	0/1:18,1:17:12.31:12,0,468	0/0:16,0:10:27.08:0,27,355	1/1:12,4:16:39:499,39,0	0/0:21,0:21:63.21:0,63,926	0/0:19,0:18:45.15:0,45,663	0/0:29,0:29:78.26:0,78,1149	1/1:8,2:10:27.09:407,27,0	1/1:8,1:9:27.08:376,27,0	1/1:13,0:12:29.96:328,30,0	1/1:6,0:6:14.25:151,14,0	1/1:8,0:8:21.04:273,21,0	1/1:8,0:8:24.01:303,24,0	0/0:23,0:23:69.20:0,69,963	1/1:9,0:8:18.06:260,18,0	1/1:6,0:5:11.99:145,12,0	1/1:6,0:4:4.81:80,5,0	1/1:7,0:6:15.05:217,15,0	1/1:11,0:11:33.01:375,33,0	1/1:2,1:3:9.03:139,9,0	1/1:7,0:7:8.26:226,8,0	1/1:9,0:9:20.93:208,21,0	1/1:6,0:4:11.77:142,12,0	1/1:9,0:9:27.04:361,27,0	1/1:12,0:12:33.06:425,33,0	1/1:6,0:6:15.04:207,15,0	1/1:2,0:2:6.02:86,6,0
chr10	48070621	.	A	AGT	5891.53	PASS	AB=1.000;AC=41;AF=0.732;AN=56;BaseQRankSum=10.000;DP=315;FS=8.426;HRun=0;HaplotypeScore=121.3610;InbreedingCoeff=0.8311;MQ=54.98;MQ0=15;MQRankSum=-8.832;QD=27.92;ReadPosRankSum=-1.364;VQSLOD=5.6788;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,3:9:21.02:229,21,0	0/0:8,0:7:21.07:0,21,317	0/0:11,0:4:9.03:0,9,129	0/0:15,0:9:17.44:0,17,259	1/1:17,0:17:38.26:479,38,0	0/0:18,0:18:51.17:0,51,801	0/0:15,0:14:42.10:0,42,620	0/0:22,0:21:63.19:0,63,917	1/1:10,0:9:27.02:301,27,0	0/1:17,0:15:15.92:312,0,16	1/1:17,0:16:42.04:474,42,0	1/1:5,0:5:12:134,12,0	1/1:17,0:16:47.98:513,48,0	1/1:6,0:6:18.05:237,18,0	0/0:15,0:15:45.15:0,45,694	1/1:9,0:9:22.62:242,23,0	1/1:7,2:7:18.03:191,18,0	1/1:2,0:2:6.01:71,6,0	1/1:10,0:10:30.08:393,30,0	1/1:11,0:11:33.05:369,33,0	1/1:4,0:4:6:84,6,0	1/1:8,0:8:21.02:248,21,0	1/1:6,0:6:15.02:175,15,0	1/1:5,2:5:6.48:69,6,0	1/1:11,0:10:30:344,30,0	1/1:12,0:12:36.08:463,36,0	1/1:13,2:15:36.01:411,36,0	1/1:8,0:5:12.03:154,12,0
chr10	48071779	.	AGGTCTT	A	570.40	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.740;DP=453;FS=6.496;HRun=0;HaplotypeScore=91.5843;InbreedingCoeff=0.9306;MQ=81.66;MQ0=0;MQRankSum=-5.345;QD=51.85;ReadPosRankSum=1.724;VQSLOD=3.4529;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:60.21:0,60,2191	0/0:3,0:3:9.03:0,9,330	0/0:19,0:18:54.19:0,54,1686	0/0:8,0:8:18.83:0,19,749	0/0:19,0:19:54.19:0,54,1979	0/0:22,0:22:63.22:0,63,2291	0/0:7,0:7:21.07:0,21,770	0/0:26,0:25:69.24:0,69,2507	0/0:13,0:13:39.13:0,39,1429	0/0:21,0:21:63.22:0,63,2283	0/0:16,0:16:42.14:0,42,1536	0/0:13,0:13:36.12:0,36,1317	0/0:11,0:11:33.11:0,33,1166	0/0:17,0:17:51.18:0,51,1796	0/0:14,0:14:42.14:0,42,1539	1/1:1,10:11:27.09:664,27,0	0/0:21,0:21:60.21:0,60,2176	0/0:20,0:20:60.21:0,60,2166	0/0:15,0:15:42.14:0,42,1512	0/0:26,0:26:72.25:0,72,2636	0/0:18,0:18:54.19:0,54,1979	0/0:14,0:14:42.14:0,42,1538	0/0:15,0:15:45.15:0,45,1646	0/0:14,0:14:42.14:0,42,1539	0/0:15,0:15:42.14:0,42,1517	0/0:17,0:17:51.18:0,51,1862	0/0:29,0:29:87.30:0,87,3166	0/0:7,0:7:21.07:0,21,769
chr10	48072235	.	CAAAGAAAG	C	3211.69	PASS	AC=16;AF=0.308;AN=52;BaseQRankSum=-2.597;DP=582;FS=1.139;HRun=0;HaplotypeScore=175.0390;InbreedingCoeff=0.9398;MQ=54.91;MQ0=4;MQRankSum=-5.351;QD=16.64;ReadPosRankSum=-1.662;VQSLOD=2.8777;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:36,0:36:10.83:157,11,0	0/0:12,0:12:18.06:0,18,429	./.	./.	0/0:25,0:25:54.17:0,54,1057	0/0:25,0:25:39.12:0,39,1125	0/0:17,0:17:39.06:0,39,844	1/1:28,0:22:26.93:299,27,0	0/0:6,0:14:15.04:0,15,390	0/0:30,0:30:53.30:0,53,1102	0/0:26,0:25:61.06:0,61,1248	0/0:10,0:19:6.02:0,6,210	0/0:21,0:21:9.03:0,9,123	1/1:5,19:24:45.15:1126,45,0	0/0:25,0:25:23.65:0,24,481	1/1:11,0:11:8.96:90,9,0	0/0:27,0:27:38.88:0,39,642	0/0:16,0:16:29.50:0,29,366	1/1:9,5:14:15.05:335,15,0	1/1:17,19:36:45.14:756,45,0	1/1:9,0:9:12.04:203,12,0	0/0:3,0:10:22.12:0,22,345	0/0:21,0:21:24.53:0,25,502	0/0:22,0:24:51.60:0,52,1137	0/0:20,0:20:42.14:0,42,1014	0/0:22,0:22:48.62:0,49,1407	1/1:12,23:35:18.06:443,18,0	0/0:15,0:15:29.97:0,30,843
chr10	48072251	.	GAAAGAAAGAAAGAAAGAAAGAAAC	G	765.07	PASS	AB=1.000;AC=4;AF=0.071;AN=56;BaseQRankSum=0.670;DP=585;FS=1.278;HRun=0;HaplotypeScore=343.7230;InbreedingCoeff=0.4428;MQ=53.62;MQ0=6;MQRankSum=-3.617;QD=12.34;ReadPosRankSum=1.193;VQSLOD=1.6389;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,30:34:15.05:742,15,0	0/0:12,0:12:30.10:0,30,1762	0/0:7,0:3:6.02:0,6,86	0/0:5,0:4:3.89:0,4,35	0/0:30,0:30:84.25:0,84,3565	0/0:22,0:22:60.18:0,60,3641	0/0:18,0:18:48.16:0,48,2730	0/0:36,0:25:57:0,57,874	0/0:18,0:18:36.12:0,36,1836	0/0:28,0:28:81.27:0,81,3715	0/0:32,0:30:90.30:0,90,4356	0/0:17,0:17:27.08:0,27,1151	0/0:22,0:22:21.04:0,21,731	0/0:23,0:23:54.15:0,54,1799	0/0:28,0:28:33.10:0,33,1893	0/1:13,0:13:99:124,0,378	0/0:23,0:23:69.08:0,69,3010	0/0:15,0:15:42.14:0,42,1972	0/0:10,0:9:24.07:0,24,751	0/0:31,0:31:81.22:0,81,2129	0/0:13,0:13:31.35:0,31,760	0/0:11,0:11:27.09:0,27,1359	0/0:19,0:19:40.88:0,41,1848	0/0:23,0:23:61.45:0,61,3860	0/0:19,0:19:57.18:0,57,2830	0/0:28,0:28:75.26:0,75,4592	0/0:33,0:33:45.02:0,45,962	0/1:15,0:15:0.70:1,0,2149
chr10	48072253	.	A	AAGAAAGAA	5419.83	PASS	AB=0.998;AC=36;AF=0.692;AN=52;BaseQRankSum=-4.778;DP=575;FS=10.487;HRun=0;HaplotypeScore=173.2227;InbreedingCoeff=-0.0412;MQ=53.55;MQ0=6;MQRankSum=-0.161;QD=10.17;ReadPosRankSum=-0.821;VQSLOD=3.2260;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:31,0:31:17:29,0,17	1/1:11,0:11:6.96:113,7,0	./.	./.	1/1:30,0:30:45.11:601,45,0	1/1:23,0:23:14.60:136,15,0	0/1:17,0:17:0.55:1,0,43	0/1:35,0:25:0.12:0,0,0	1/1:18,0:18:8.98:73,9,0	1/1:27,0:27:45.14:696,45,0	1/1:33,0:31:48.35:577,48,0	1/1:16,0:16:5.99:49,6,0	1/1:6,14:21:3.01:122,3,0	0/1:22,0:22:99:136,0,253	1/1:28,0:28:18.95:623,19,0	0/0:13,0:13:6.02:0,6,72	1/1:23,0:23:23.63:233,24,0	1/1:15,0:15:22.40:228,22,0	0/1:9,0:8:61.64:93,0,62	0/1:32,0:32:52.41:52,0,298	0/1:14,0:14:29.77:30,0,84	0/1:10,0:10:33.42:85,0,33	0/0:19,0:19:9.86:0,10,164	0/1:23,0:23:18.94:175,0,19	1/1:19,0:19:33.57:512,34,0	0/1:28,0:28:8.53:503,0,9	0/1:32,0:32:87.15:94,0,87	0/1:15,0:15:14.93:260,0,15
chr10	48072271	.	G	GAAAGAAAC	6661.56	PASS	AB=0.979;AC=32;AF=0.571;AN=56;BaseQRankSum=0.462;DP=594;FS=5.078;HRun=0;HaplotypeScore=182.5678;InbreedingCoeff=-0.4153;MQ=52.66;MQ0=7;MQRankSum=-2.046;QD=11.53;ReadPosRankSum=0.434;VQSLOD=3.6764;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:30:2.01:2,0,80	1/1:7,0:7:21:269,21,0	0/0:9,0:7:12.53:0,13,99	0/0:7,0:6:12:0,12,112	0/1:30,0:30:99:246,0,189	1/1:26,0:26:74.61:695,75,0	1/1:23,0:23:38.67:438,39,0	1/1:39,0:28:72.07:571,72,0	0/1:19,0:19:31.11:31,0,211	0/1:27,0:27:99:288,0,179	0/1:34,0:32:99:215,0,288	0/1:16,0:16:18.16:18,0,138	0/1:22,0:22:82.73:83,0,126	0/1:24,0:24:99:365,0,133	1/1:1,23:27:20.95:753,21,0	0/1:11,0:11:12.14:110,0,12	0/1:20,0:20:99:161,0,178	1/1:17,0:17:35.88:336,36,0	0/1:19,0:16:4.88:293,0,5	0/1:31,0:31:99:409,0,120	0/1:15,0:15:20.09:223,0,20	0/1:13,0:12:82.47:82,0,140	0/1:5,0:13:24.26:24,0,72	0/1:22,0:23:95.66:301,0,96	0/1:25,0:25:99:240,0,197	0/1:28,0:28:99:174,0,360	0/1:26,0:26:39.03:220,0,39	0/1:13,0:13:40.67:113,0,41
chr10	48072442	.	CCACAATCACA	C	1092.80	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.609;DP=657;FS=11.089;HRun=0;HaplotypeScore=187.7108;InbreedingCoeff=0.9699;MQ=82.76;MQ0=0;MQRankSum=-5.832;QD=64.28;ReadPosRankSum=0.516;VQSLOD=2.7792;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,117,5738	0/0:16,0:16:48.16:0,48,2334	0/0:22,0:22:66.22:0,66,2906	0/0:18,0:18:51.13:0,51,2080	0/0:35,0:35:99:0,102,5157	0/0:22,0:22:63.22:0,63,3184	0/0:23,0:23:63.22:0,63,3199	0/0:28,0:28:84.28:0,84,4032	0/0:13,0:13:39.13:0,39,2081	0/0:20,0:20:60.21:0,60,2977	0/0:23,0:23:69.24:0,69,3573	0/0:21,0:21:63.22:0,63,3106	0/0:19,0:19:54.19:0,54,2726	0/0:26,0:26:75.26:0,75,3667	0/0:31,0:31:93.32:0,93,4889	1/1:2,15:17:36.12:1188,36,0	0/0:18,0:18:54.19:0,54,2714	0/0:14,0:14:39.13:0,39,2080	0/0:16,0:16:48.16:0,48,2132	0/0:36,0:36:99:0,102,5194	0/0:42,0:42:99:0,126,6500	0/0:12,0:12:36.12:0,36,1906	0/0:19,0:19:57.18:0,57,2602	0/0:38,0:38:99:0,108,5539	0/0:17,0:17:51.13:0,51,2574	0/0:31,0:31:90.31:0,90,4706	0/0:36,0:36:99:0,108,5493	0/0:4,0:4:12.04:0,12,640
chr10	48074527	.	GA	G	5768.53	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=0.636;DP=515;FS=5.858;HRun=10;HaplotypeScore=63.3024;InbreedingCoeff=0.9575;MQ=83.69;MQ0=0;MQRankSum=0.974;QD=21.36;ReadPosRankSum=4.344;VQSLOD=5.7761;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:33.09:0,33,365	0/0:11,0:11:27.06:0,27,292	0/0:27,0:24:1.22:0,1,202	0/0:10,0:10:12.63:0,13,136	1/1:1,17:18:47.87:407,48,0	0/0:21,0:21:51.13:0,51,557	0/0:19,0:19:45.11:0,45,490	0/0:23,0:23:60.12:0,60,638	1/1:4,18:22:38.99:339,39,0	1/1:1,18:19:53.98:466,54,0	1/1:4,18:22:50.60:400,51,0	1/1:2,15:17:38.82:338,39,0	1/1:2,11:13:32.99:287,33,0	0/0:18,0:17:41.52:0,42,197	0/0:21,0:21:57.13:0,57,615	0/0:18,0:18:48.13:0,48,531	1/1:5,19:24:50.98:442,51,0	1/1:3,29:32:74.98:651,75,0	0/0:15,0:15:11.74:0,12,129	0/0:18,0:18:24.04:0,24,201	0/0:9,0:9:19.70:0,20,97	1/1:1,9:10:26.99:234,27,0	1/1:1,16:17:44.99:391,45,0	1/1:0,16:16:47.99:417,48,0	1/1:2,28:30:71.07:623,71,0	1/1:0,25:25:74.95:645,75,0	0/0:21,0:21:56.23:0,56,280	1/1:0,5:5:15:130,15,0
chr10	48075479	.	G	GA	1224.37	PASS	AB=0.857;AC=29;AF=0.518;AN=56;BaseQRankSum=-0.103;DP=466;FS=4.733;HRun=11;HaplotypeScore=83.5781;InbreedingCoeff=0.6604;MQ=82.70;MQ0=14;MQRankSum=-0.164;QD=6.65;ReadPosRankSum=3.522;VQSLOD=2.2601;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:6,16:23:21.72:311,0,22	0/0:5,0:5:4.32:0,4,74	0/0:80,0:28:14.86:0,15,165	0/0:61,0:29:12.28:0,12,122	1/1:11,0:11:5.28:63,5,0	0/0:11,0:12:34.88:0,35,257	0/0:11,0:11:23.86:0,24,181	0/0:6,0:28:49.88:0,50,164	1/1:4,0:4:11.07:52,11,0	1/1:11,0:10:21.24:73,21,0	1/1:13,0:13:24.60:98,25,0	1/1:10,0:10:1.31:48,1,0	1/1:5,0:5:8.39:40,8,0	0/0:4,0:4:5.96:0,6,44	0/0:15,0:15:38.83:0,39,299	1/1:4,11:15:23.78:244,24,0	0/1:22,0:22:4.89:79,0,5	1/1:15,0:14:4.91:66,5,0	0/0:21,0:21:45.69:0,46,331	0/0:15,0:15:40.09:0,40,287	0/0:10,0:10:28.93:0,29,212	1/1:8,0:8:19.01:88,19,0	1/1:7,0:7:10.63:45,11,0	1/1:6,0:6:13.59:61,14,0	1/1:10,0:10:17.65:76,18,0	0/1:19,0:19:12.89:61,0,13	0/0:18,0:18:41.70:0,42,309	1/1:4,0:4:5.34:23,5,0
chr10	48075489	.	A	AT	2628.42	PASS	AB=1.000;AC=24;AF=0.429;AN=56;BaseQRankSum=0.464;DP=468;FS=1.955;HRun=0;HaplotypeScore=84.5509;InbreedingCoeff=0.6362;MQ=84.43;MQ0=11;MQRankSum=-0.577;QD=12.58;ReadPosRankSum=1.232;VQSLOD=4.3261;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:26:10.60:11,0,207	0/0:5,0:5:14.98:0,15,179	0/0:71,0:26:35.71:0,36,487	0/0:58,0:31:37.12:0,37,381	1/1:2,12:14:37.72:365,38,0	0/0:14,0:14:42.03:0,42,524	0/0:11,0:11:33.05:0,33,405	0/0:27,0:26:76.35:0,76,493	0/0:7,0:7:11.16:0,11,50	1/1:0,18:17:53.63:497,54,0	1/1:0,15:15:41.70:404,42,0	0/0:10,0:10:16.99:0,17,95	0/0:8,0:8:7.91:0,8,36	1/1:3,0:3:0.87:2,1,0	0/0:13,0:13:39.13:0,39,541	0/1:15,0:15:2.18:2,0,85	1/1:3,17:20:35.23:428,35,0	1/1:5,9:14:10.14:261,10,0	1/1:21,1:22:2.58:86,3,0	0/1:16,0:16:7.02:41,0,7	0/0:10,0:10:3.52:0,4,24	0/0:8,0:8:20.10:0,20,109	0/0:9,0:9:15.73:0,16,82	0/0:7,0:7:13.63:0,14,60	1/1:0,9:9:21.06:244,21,0	1/1:3,13:16:1.54:359,2,0	0/1:16,0:16:1.71:28,0,2	1/1:1,2:4:9:93,9,0
chr10	48075490	.	A	AT	4425.85	PASS	AB=0.983;AC=41;AF=0.732;AN=56;BaseQRankSum=2.682;DP=471;FS=4.052;HRun=5;HaplotypeScore=79.1146;InbreedingCoeff=0.6292;MQ=84.47;MQ0=11;MQRankSum=-2.373;QD=13.02;ReadPosRankSum=3.966;VQSLOD=3.3257;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:26,1:26:32.63:33,0,192	0/0:5,0:5:14.87:0,15,131	0/1:68,0:26:11.18:11,0,166	0/0:60,0:32:2.89:0,3,183	1/1:13,0:14:39.43:397,39,0	0/0:15,0:15:41.98:0,42,410	0/0:11,0:11:29.99:0,30,292	0/0:27,0:26:73.52:0,74,470	1/1:0,7:7:12.04:149,12,0	1/1:18,0:17:53.95:520,54,0	1/1:16,0:16:42.43:427,42,0	1/1:1,9:10:15.05:187,15,0	1/1:1,8:9:9.03:113,9,0	1/1:2,0:2:3.28:10,3,0	0/0:13,0:13:39.09:0,39,411	0/1:15,0:15:13.66:14,0,78	1/1:20,0:20:39.95:451,40,0	1/1:11,0:13:32.75:339,33,0	1/1:22,0:22:29.82:184,30,0	1/1:16,0:16:17.79:80,18,0	1/1:11,0:11:4.40:15,4,0	1/1:1,7:9:23.92:259,24,0	1/1:0,9:9:17.89:183,18,0	1/1:0,7:7:15.05:187,15,0	1/1:9,0:9:21.05:241,21,0	1/1:16,0:16:42.06:451,42,0	1/1:17,0:17:18.93:82,19,0	1/1:4,0:4:9.01:94,9,0
chr10	48077238	.	GA	G	2823.23	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=9.800;DP=513;FS=6.348;HRun=10;HaplotypeScore=51.7746;InbreedingCoeff=0.9546;MQ=69.19;MQ0=8;MQRankSum=-1.440;QD=19.88;ReadPosRankSum=2.181;VQSLOD=4.5287;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,37:43:99:886,102,0	0/0:9,0:9:27.06:0,27,289	0/0:15,0:13:30.04:0,30,305	0/0:12,0:12:1.40:0,1,53	0/0:31,0:31:75.19:0,75,814	0/0:25,1:25:40.11:0,40,663	0/0:13,0:11:24.06:0,24,265	0/0:32,0:27:74.24:0,74,767	0/0:14,0:14:37.65:0,38,402	0/0:20,0:19:45.12:0,45,497	0/0:22,0:22:60.16:0,60,664	0/0:12,0:12:33.09:0,33,364	0/0:11,0:10:30.07:0,30,324	1/1:1,7:7:21:182,21,0	0/0:18,0:18:45.12:0,45,498	1/1:3,17:19:44.99:391,45,0	0/0:23,0:23:57.15:0,57,630	0/0:17,0:17:45.12:0,45,498	1/1:2,14:16:41.99:364,42,0	1/1:0,16:16:44.98:390,45,0	1/1:0,13:13:35.99:312,36,0	0/0:16,0:16:36.10:0,36,398	0/0:15,0:15:13.15:0,13,372	0/0:13,0:13:24.06:0,24,265	0/0:17,0:17:42.11:0,42,458	0/0:21,0:21:57.14:0,57,620	1/1:3,23:26:56.99:495,57,0	0/0:13,0:13:39.09:0,39,421
chr10	48077548	.	C	CT	4516.83	PASS	AB=0.779;AC=29;AF=0.518;AN=56;BaseQRankSum=-4.661;DP=549;FS=0.839;HRun=11;HaplotypeScore=59.0499;InbreedingCoeff=0.6853;MQ=63.34;MQ0=21;MQRankSum=-0.669;QD=13.65;ReadPosRankSum=1.580;VQSLOD=4.9510;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,20:27:24.87:433,25,0	0/0:7,0:7:17.91:0,18,139	0/1:26,0:14:22.23:22,0,79	0/0:31,0:13:14.84:0,15,107	1/1:11,25:35:62.80:645,63,0	0/0:26,0:26:34.18:0,34,376	0/0:10,0:10:11.72:0,12,110	0/0:29,0:28:41.77:0,42,321	1/1:4,13:16:18.04:183,18,0	1/1:10,17:25:58.26:591,58,0	1/1:7,10:17:28.01:272,28,0	0/1:6,6:13:2.54:129,0,3	1/1:1,4:5:12.02:122,12,0	0/0:10,0:10:26.89:0,27,209	0/1:23,0:24:2.97:3,0,254	0/0:16,0:15:32.85:0,33,255	0/1:5,8:12:19.34:183,0,19	1/1:10,12:22:15.98:309,16,0	0/0:24,0:21:16.74:0,17,298	0/0:25,0:25:51.17:0,51,380	0/0:16,0:15:32.86:0,33,253	1/1:7,12:19:9.60:264,10,0	1/1:8,7:15:18:170,18,0	0/1:4,6:10:1.30:162,0,1	1/1:5,16:21:11.28:283,11,0	1/1:8,21:30:66.08:654,66,0	0/0:20,0:20:52.60:0,53,388	1/1:1,3:3:9.02:91,9,0
chr10	48078217	.	A	AAG	135.13	PASS	AB=0.873;AC=3;AF=0.054;AN=56;BaseQRankSum=3.554;DP=494;FS=0.740;HRun=0;HaplotypeScore=69.1666;InbreedingCoeff=0.1092;MQ=48.21;MQ0=21;MQRankSum=0.050;QD=1.83;ReadPosRankSum=5.481;VQSLOD=1.1317;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:15,19:39:48.66:209,0,49	0/0:7,0:7:8.43:0,8,102	0/0:33,0:4:8.78:0,9,56	0/1:31,0:10:2.13:2,0,71	0/0:28,0:28:64.46:0,64,439	0/0:16,0:16:41.33:0,41,353	0/0:12,0:12:5.38:0,5,96	0/0:26,0:26:55.96:0,56,517	0/0:11,0:9:13.17:0,13,99	0/0:15,0:15:42.87:0,43,280	0/0:20,0:20:24.22:0,24,246	0/0:13,0:11:11.17:0,11,119	0/0:16,0:14:22.10:0,22,163	0/0:11,0:11:23.88:0,24,193	0/0:16,0:16:35.86:0,36,321	0/0:12,0:12:23.88:0,24,199	0/0:27,0:27:30.87:0,31,233	0/0:21,0:21:40.15:0,40,302	0/0:17,0:17:47.13:0,47,355	0/0:18,0:18:44.87:0,45,350	0/0:8,0:7:6.82:0,7,42	0/0:9,0:9:14.78:0,15,100	0/0:9,0:8:6.98:0,7,67	0/1:4,0:4:0.06:0,0,1	0/0:24,0:24:54.22:0,54,422	0/0:15,0:15:38.37:0,38,257	0/0:15,0:14:28.16:0,28,294	0/0:21,0:16:25.91:0,26,182
chr10	48078273	.	TC	T	318.49	PASS	AB=0.538;AC=1;AF=0.018;AN=56;BaseQRankSum=2.844;DP=486;FS=6.395;HRun=4;HaplotypeScore=52.1962;InbreedingCoeff=0.4512;MQ=83.16;MQ0=0;MQRankSum=0.067;QD=22.75;ReadPosRankSum=1.549;VQSLOD=2.4528;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:93.29:0,93,1283	0/0:7,0:7:18.06:0,18,252	0/0:16,0:16:42.11:0,42,556	0/0:16,0:15:42.10:0,42,542	0/0:27,0:27:81.27:0,81,1133	0/0:13,0:13:36.12:0,36,504	0/0:21,0:21:57.15:0,57,775	0/0:26,0:26:69.22:0,69,938	0/0:13,0:13:36.12:0,36,504	0/0:16,0:16:48.16:0,48,672	0/0:16,0:16:42.14:0,42,588	0/0:27,0:27:78.18:0,78,1018	0/0:9,0:9:27.09:0,27,377	0/0:11,0:11:33.11:0,33,462	0/0:16,0:16:45.14:0,45,612	0/1:2,12:14:2.78:393,0,3	0/0:26,0:26:60.16:0,60,817	0/0:21,0:21:57.16:0,57,763	0/0:12,0:12:36.11:0,36,486	0/0:24,0:24:72.23:0,72,983	0/0:16,0:16:45.12:0,45,609	0/0:7,0:7:21.07:0,21,294	0/0:22,0:22:66.21:0,66,907	0/0:12,0:12:36.12:0,36,504	0/0:20,0:20:54.18:0,54,756	0/0:16,0:16:48.16:0,48,671	0/0:18,0:18:54.16:0,54,737	0/0:5,0:5:9.03:0,9,126
chr10	48078982	.	C	CTTT	6252.41	PASS	AB=1.000;AC=43;AF=0.768;AN=56;BaseQRankSum=4.384;DP=518;FS=22.514;HRun=15;HaplotypeScore=140.4047;InbreedingCoeff=0.8483;MQ=66.70;MQ0=13;MQRankSum=-7.923;QD=15.79;ReadPosRankSum=-3.146;VQSLOD=0.9226;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,4:26:20.67:340,21,0	0/0:5,0:7:16.57:0,17,162	0/0:26,0:18:14.68:0,15,110	0/1:23,0:13:1.74:2,0,93	1/1:21,3:27:53.85:617,54,0	0/0:18,0:19:26.51:0,27,250	0/0:18,0:17:22.95:0,23,233	0/0:14,0:30:54.90:0,55,343	1/1:9,6:17:32.95:442,33,0	1/1:17,1:28:37.44:503,37,0	1/1:10,1:15:19.28:239,19,0	1/1:6,0:10:6.91:87,7,0	1/1:4,5:9:13.59:176,14,0	1/1:9,0:15:30.04:219,30,0	0/0:15,0:19:19.44:0,19,170	1/1:13,2:16:29.60:292,30,0	1/1:20,1:26:39.60:513,40,0	1/1:7,5:12:15.05:212,15,0	1/1:10,0:16:26.36:219,26,0	1/1:13,1:19:23.73:187,24,0	1/1:8,0:11:14.91:110,15,0	1/1:9,6:16:27.04:370,27,0	1/1:11,4:16:24:312,24,0	1/1:4,2:5:2.98:49,3,0	1/1:20,1:22:39.04:466,39,0	1/1:8,3:20:40.27:500,40,0	1/1:14,1:23:4.14:203,4,0	1/1:11,0:11:17:196,17,0
chr10	48079565	.	G	GT	2990.64	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-11.865;DP=605;FS=3.241;HRun=7;HaplotypeScore=55.6598;InbreedingCoeff=0.9979;MQ=73.82;MQ0=0;MQRankSum=-0.383;QD=29.91;ReadPosRankSum=-0.028;VQSLOD=4.1223;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:66.07:0,66,629	0/0:8,0:8:24.04:0,24,232	0/0:12,0:12:33:0,33,299	0/0:17,0:17:36.04:0,36,348	0/0:33,0:33:84.12:0,84,806	0/0:17,0:17:39.06:0,39,376	0/0:15,0:15:42.05:0,42,400	0/0:44,0:44:99:0,108,1039	0/0:20,0:20:51.08:0,51,493	0/0:29,0:29:81.12:0,81,778	0/0:25,0:25:66.10:0,66,637	0/0:21,0:21:54.05:0,54,513	0/0:19,0:19:45.07:0,45,435	1/1:1,18:19:54.17:652,54,0	0/0:26,0:26:75.12:0,75,724	0/0:22,0:23:53.11:0,53,498	0/0:41,0:41:99:0,108,1037	0/0:22,0:22:51.08:0,51,492	1/1:2,18:22:59.87:665,60,0	1/1:1,27:28:78.24:942,78,0	1/1:2,9:11:24.07:290,24,0	0/0:18,0:18:48.07:0,48,464	0/0:14,0:14:39.06:0,39,376	0/0:25,0:25:69.09:0,69,660	0/0:26,0:26:78.10:0,78,746	0/0:18,0:18:42.07:0,42,406	1/1:3,17:20:51.16:616,51,0	0/0:7,0:7:21.03:0,21,203
chr10	48080627	.	ATAG	A	2815.41	PASS	AB=0.908;AC=37;AF=0.661;AN=56;BaseQRankSum=4.640;DP=324;FS=0.000;HRun=0;HaplotypeScore=63.6753;InbreedingCoeff=0.4936;MQ=66.85;MQ0=1;MQRankSum=-2.289;QD=10.66;ReadPosRankSum=0.115;VQSLOD=2.8336;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:26.80:0,27,219	0/0:9,0:9:24.05:0,24,416	0/0:8,0:7:5.12:0,5,70	0/0:5,0:5:6.02:0,6,66	1/1:22,0:22:39.35:268,39,0	0/0:13,0:13:27.02:0,27,368	0/0:4,0:4:9:0,9,110	1/1:32,0:31:45.02:411,45,0	1/1:16,0:16:15.01:139,15,0	1/1:12,0:12:29.98:262,30,0	1/1:9,0:9:14.66:100,15,0	1/1:17,0:17:18.02:171,18,0	1/1:13,0:13:9.01:86,9,0	0/1:10,0:10:78.59:79,0,106	0/0:7,0:7:4.65:0,5,199	0/1:9,0:9:61.07:61,0,70	1/1:10,0:10:5.88:45,6,0	1/1:8,0:8:3.01:33,3,0	1/1:10,0:10:8.71:84,9,0	0/1:13,0:13:94.62:98,0,95	1/1:3,0:3:8.96:69,9,0	1/1:10,0:10:11.90:96,12,0	0/1:1,6:7:0:0,0,0	1/1:2,0:2:5.97:45,6,0	1/1:18,0:18:26.92:254,27,0	1/1:20,0:20:48:442,48,0	0/1:19,0:19:99:156,0,112	1/1:4,0:4:11.99:103,12,0
chr10	48080642	.	GTAGTAA	G	4572.41	PASS	AB=0.925;AC=34;AF=0.607;AN=56;BaseQRankSum=0.695;DP=283;FS=1.761;HRun=0;HaplotypeScore=67.0945;InbreedingCoeff=0.3380;MQ=58.07;MQ0=1;MQRankSum=-0.637;QD=19.46;ReadPosRankSum=0.408;VQSLOD=3.9037;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:27.35:0,27,313	0/0:9,0:9:27.04:0,27,719	0/0:5,0:4:5.12:0,5,70	0/0:2,0:2:6.02:0,6,66	1/1:0,17:17:44.60:461,45,0	0/0:11,0:11:9.13:0,9,560	0/0:3,0:3:9:0,9,155	0/1:28,0:27:99:304,0,320	1/1:1,0:16:15.05:244,15,0	1/1:0,11:11:33.01:433,33,0	1/1:0,14:14:17.80:199,18,0	1/1:1,0:13:18.06:297,18,0	1/1:0,0:12:9.03:149,9,0	0/1:8,0:8:53.66:54,0,290	0/0:7,0:7:18.03:0,18,402	0/1:6,0:7:79:79,0,220	0/1:1,9:10:16.97:118,0,17	1/1:0,7:7:3.01:71,3,0	0/1:5,0:5:16.01:73,0,16	0/1:9,0:9:72.64:73,0,286	1/1:3,0:3:8.96:69,9,0	1/1:0,0:6:11.91:138,12,0	0/1:7,0:7:0:0,0,0	1/1:2,0:2:5.97:45,6,0	1/1:0,20:20:27.09:622,27,0	1/1:0,17:18:54.05:846,54,0	0/1:16,0:16:99:150,0,406	1/1:6,0:6:17.98:149,18,0
chr10	48081541	.	AT	A	469.43	PASS	AB=0.881;AC=17;AF=0.304;AN=56;BaseQRankSum=1.247;DP=542;FS=1.648;HRun=16;HaplotypeScore=85.5749;InbreedingCoeff=0.0346;MQ=64.48;MQ0=21;MQRankSum=2.541;QD=1.81;ReadPosRankSum=3.057;VQSLOD=-0.5937;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:24:35.72:0,36,190	0/1:5,1:6:9.02:9,0,41	0/0:12,0:8:2.60:0,3,10	0/1:10,0:7:5.70:6,0,7	0/0:20,0:22:9.37:0,9,163	0/0:22,1:24:1.89:0,2,227	0/1:11,1:10:3:3,0,86	0/0:29,5:35:7.14:0,7,309	0/0:11,0:10:17.82:0,18,128	0/0:18,0:20:30.27:0,30,239	0/0:12,0:11:2.87:0,3,118	0/0:15,0:15:26.70:0,27,196	0/1:18,0:18:14.35:14,0,83	1/1:6,5:10:5.58:35,6,0	0/0:19,0:19:25.90:0,26,189	0/1:26,3:32:28.51:29,0,244	0/0:32,0:32:15.52:0,16,313	0/1:12,0:12:2.61:3,0,69	0/1:15,7:21:24.20:102,0,24	0/1:10,14:28:1.44:190,0,1	1/1:4,4:10:9.86:48,10,0	0/0:22,0:23:4.10:0,4,224	0/1:15,2:17:12.90:13,0,151	0/1:22,2:24:11.27:11,0,146	0/0:14,1:17:4.95:0,5,163	0/1:22,5:29:35.37:35,0,252	1/1:10,12:22:8.17:126,8,0	0/0:9,1:9:5.88:0,6,143
chr10	48082316	.	A	AGCCTGCCTCT	29037.79	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=-9.699;DP=505;FS=10.315;HRun=0;HaplotypeScore=107.1849;InbreedingCoeff=0.9081;MQ=61.23;MQ0=0;MQRankSum=-12.588;QD=74.46;ReadPosRankSum=4.479;VQSLOD=4.1663;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,12:24:27.09:1210,27,0	0/0:5,0:5:12.04:0,12,392	0/0:25,0:24:49.18:0,49,1590	0/0:15,0:15:38.19:0,38,837	1/1:1,12:33:36.12:1682,36,0	0/0:13,0:13:39.12:0,39,1082	0/0:12,0:12:33.10:0,33,932	0/0:22,0:22:57.18:0,57,1620	1/1:0,20:24:54.19:2831,54,0	1/1:0,6:16:48.10:1561,48,0	1/1:1,10:29:27.09:1401,27,0	1/1:0,11:16:33.11:1730,33,0	1/1:2,17:23:48.16:2509,48,0	1/1:1,8:13:27.09:1401,27,0	0/0:23,0:23:63.22:0,63,1979	1/1:0,15:21:39.13:2021,39,0	1/1:0,4:8:6.02:315,6,0	1/1:1,5:12:15.05:543,15,0	1/1:5,6:20:45.14:1650,45,0	1/1:1,14:23:39.13:2045,39,0	1/1:1,1:6:3.01:133,3,0	1/1:1,6:13:18.06:942,18,0	1/1:2,2:14:5.75:249,6,0	1/1:1,11:15:14.66:785,15,0	1/1:2,9:27:24.08:1246,24,0	1/1:1,12:23:63.15:2426,63,0	1/1:3,13:24:36.12:1888,36,0	1/1:0,3:5:9.03:473,9,0
chr10	48082789	.	TGTGTGTGTGTGC	T	6332.30	PASS	AB=0.992;AC=21;AF=0.375;AN=56;BaseQRankSum=15.927;DP=680;FS=12.924;HRun=0;HaplotypeScore=272.4592;InbreedingCoeff=-0.4963;MQ=54.26;MQ0=6;MQRankSum=-14.011;QD=13.77;ReadPosRankSum=6.434;VQSLOD=2.0264;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:19:0.66:195,1,0	0/0:10,0:10:24.08:0,24,1358	0/0:37,0:21:48.08:0,48,1347	0/0:34,0:15:40.85:0,41,1399	0/1:35,0:35:99:222,0,160	0/0:25,0:25:69.22:0,69,2952	0/0:29,0:29:31.62:0,32,3392	0/0:32,0:32:75.18:0,75,2561	0/1:17,0:17:66.01:227,0,66	0/1:35,0:34:99:615,0,202	0/1:20,1:21:73.84:271,0,74	0/1:30,0:30:74.92:378,0,75	0/1:23,2:25:38.92:615,0,39	0/1:21,0:21:58.95:434,0,59	0/0:28,0:28:78.27:0,78,4090	0/0:25,0:25:57.18:0,57,1973	0/1:21,0:21:82.76:185,0,83	0/1:14,0:14:30.55:251,0,31	0/1:25,0:25:99:297,0,232	0/1:21,0:21:38.78:305,0,39	0/1:26,0:26:61.24:61,0,190	0/1:23,1:24:64.08:372,0,64	0/1:23,0:23:66:266,0,66	0/1:23,0:23:94.84:108,0,95	0/1:18,0:18:26.65:191,0,27	0/1:30,0:30:99:714,0,138	0/1:26,0:26:42.51:514,0,43	0/1:6,0:6:73.64:110,0,74
chr10	48082791	.	TGTGTGTGTGC	T	15247.87	PASS	AB=0.585;AC=39;AF=0.696;AN=56;BaseQRankSum=8.326;DP=683;FS=4.459;HRun=0;HaplotypeScore=225.1639;InbreedingCoeff=0.8525;MQ=54.09;MQ0=6;MQRankSum=-11.282;QD=33.37;ReadPosRankSum=4.419;VQSLOD=4.0287;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:9,10:19:11.98:369,12,0	0/0:10,0:10:24.08:0,24,1110	0/0:39,0:21:29.66:0,30,853	0/0:35,0:16:28.38:0,28,896	1/1:7,27:34:18.06:553,18,0	0/0:27,0:27:60.17:0,60,2414	0/0:30,0:30:60.21:0,60,2843	0/0:31,0:31:66.21:0,66,1630	1/1:4,13:17:18.06:554,18,0	1/1:9,26:34:69.50:1741,70,0	1/1:6,16:22:18.06:507,18,0	1/1:7,23:30:30.10:907,30,0	1/1:4,21:25:41.88:1134,42,0	1/1:3,17:20:35.71:1025,36,0	0/0:29,0:29:72.25:0,72,3330	0/0:25,0:25:48.16:0,48,1362	1/1:7,13:20:15.05:461,15,0	1/1:3,11:14:3.95:611,4,0	1/1:9,14:23:42.05:944,42,0	1/1:2,19:21:24.08:738,24,0	1/1:9,16:25:6.02:185,6,0	1/1:6,18:24:24.08:716,24,0	1/1:3,20:23:21.07:646,21,0	0/1:7,17:24:64.91:265,0,65	1/1:2,17:19:15.05:461,15,0	1/1:5,25:30:69.22:1900,69,0	1/1:2,24:26:42.14:1255,42,0	1/1:3,3:6:8.98:277,9,0
chr10	48082801	.	CGT	C	3159.36	PASS	AB=1.000;AC=40;AF=0.714;AN=56;BaseQRankSum=13.838;DP=649;FS=8.413;HRun=0;HaplotypeScore=191.7754;InbreedingCoeff=0.8088;MQ=53.62;MQ0=7;MQRankSum=-11.565;QD=7.02;ReadPosRankSum=5.593;VQSLOD=2.4009;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:23,2:25:11.33:61,11,0	0/0:11,0:11:30.10:0,30,501	0/0:41,1:22:43.54:0,44,576	0/0:39,0:19:36.79:0,37,542	1/1:31,0:31:17.25:91,17,0	0/0:27,0:27:66.19:0,66,1039	0/0:24,0:24:63.22:0,63,1077	0/0:27,0:27:69.19:0,69,1055	0/1:15,0:15:4.70:71,0,5	1/1:32,0:31:57.08:397,57,0	1/1:22,0:22:14.30:74,14,0	1/1:24,0:25:27.12:140,27,0	1/1:24,0:24:29.83:175,30,0	1/1:19,0:20:16.46:149,16,0	0/0:29,0:29:84.29:0,84,1404	1/1:1,21:22:48.16:638,48,0	1/1:17,0:17:14.38:76,14,0	0/1:14,0:14:5.44:103,0,5	1/1:17,0:17:35.26:277,35,0	1/1:20,0:20:23:122,23,0	1/1:22,0:22:6.12:31,6,0	1/1:21,0:21:22.92:120,23,0	1/1:22,0:22:20.13:107,20,0	1/1:22,0:22:8.62:46,9,0	1/1:18,0:18:14.38:76,14,0	1/1:29,0:29:38.70:358,39,0	1/1:26,0:26:38.31:202,38,0	1/1:6,0:6:8.62:45,9,0
chr10	48082811	.	C	CGT	386.73	PASS	AB=0.659;AC=1;AF=0.018;AN=56;BaseQRankSum=-3.180;DP=672;FS=5.107;HRun=0;HaplotypeScore=203.5313;InbreedingCoeff=-0.0231;MQ=54.02;MQ0=7;MQRankSum=1.079;QD=14.32;ReadPosRankSum=-2.190;VQSLOD=2.9597;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:20.16:0,20,170	0/0:12,0:12:27.09:0,27,359	0/0:44,0:24:49.52:0,50,576	0/0:42,0:23:47.55:0,48,555	0/0:30,0:30:23.64:0,24,182	0/0:23,0:23:57.19:0,57,756	0/0:26,0:26:72.24:0,72,954	0/1:13,14:27:99:461,0,202	0/0:15,0:15:23.58:0,24,182	0/0:33,0:32:65.56:0,66,518	0/0:21,0:21:29.62:0,30,274	0/0:25,0:26:32.34:0,32,224	0/0:26,0:26:37.54:0,38,268	0/0:21,0:21:41.19:0,41,310	0/0:35,0:35:99:0,102,1334	0/0:24,0:24:57.17:0,57,683	0/0:17,0:17:14.62:0,15,87	0/0:17,0:17:15.79:0,16,196	0/0:19,0:19:19.38:0,19,276	0/0:22,0:22:32.43:0,32,257	0/0:22,0:22:14.73:0,15,144	0/0:23,0:23:32.52:0,33,238	0/0:22,0:22:26.48:0,26,186	0/0:22,0:22:17.86:0,18,170	0/0:20,0:20:23.65:0,24,203	0/0:26,0:26:58.28:0,58,393	0/0:27,0:27:45:0,45,316	0/0:3,0:3:8.77:0,9,52
chr10	48083306	.	GAC	G	118.57	PASS	AB=0.948;AC=8;AF=0.154;AN=52;BaseQRankSum=2.860;DP=607;FS=1.874;HRun=0;HaplotypeScore=149.8088;InbreedingCoeff=0.0349;MQ=54.27;MQ0=16;MQRankSum=-0.783;QD=0.76;ReadPosRankSum=0.705;VQSLOD=2.8674;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:52,1:53:20.83:0,21,657	0/0:3,1:4:6.02:0,6,89	./.	./.	0/0:22,0:21:3.30:0,3,58	0/0:18,1:19:0.89:0,1,145	0/1:27,1:28:14.36:14,0,177	0/0:23,0:21:11.90:0,12,84	0/0:15,0:18:38.26:0,38,348	0/0:17,0:15:14.59:0,15,100	0/0:15,0:14:11.91:0,12,110	0/0:19,0:21:29.08:0,29,244	0/0:16,0:18:35.43:0,35,342	0/1:16,1:17:14.42:14,0,156	0/1:23,2:25:31.86:32,0,320	1/1:20,0:29:25.57:126,26,0	0/0:29,0:32:44.02:0,44,350	0/0:16,0:16:21.03:0,21,221	0/0:18,0:18:3.01:0,3,44	0/1:17,1:18:17.47:17,0,115	0/0:34,0:32:20.84:0,21,211	0/1:17,1:18:14.54:15,0,156	0/0:14,0:15:12.01:0,12,119	0/0:34,0:36:33.30:0,33,338	0/0:14,0:16:20.89:0,21,179	0/0:16,0:15:26.86:0,27,256	0/1:20,1:21:34.83:35,0,282	0/0:6,0:6:13.42:0,13,86
chr10	48083925	.	G	GT	282.11	PASS	AB=1.000;AC=21;AF=0.875;AN=24;DP=48;FS=0.000;HRun=1;HaplotypeScore=14.1737;InbreedingCoeff=0.1327;MQ=53.11;MQ0=0;QD=9.73;VQSLOD=0.8915;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	0/0:2,0:1:0:0,0,0	./.	1/1:2,1:3:2.99:23,3,0	./.	./.	./.	0/1:1,0:1:0:0,0,0	./.	1/1:3,0:3:2.99:23,3,0	1/1:2,0:2:2.99:24,3,0	1/1:3,0:3:2.99:24,3,0	./.	./.	./.	./.	1/1:2,0:2:5.97:45,6,0	1/1:1,1:2:5.89:37,6,0	./.	1/1:1,2:3:2.92:17,3,0	1/1:0,2:2:5.85:34,6,0	./.	1/1:2,1:3:4.55:29,5,0	1/1:4,1:5:14.16:98,14,0	./.	./.
chr10	48084354	.	CT	C	137.57	PASS	AC=20;AF=0.833;AN=24;BaseQRankSum=-2.208;DP=60;FS=0.000;HRun=1;HaplotypeScore=9.6215;InbreedingCoeff=0.2471;MQ=68.43;MQ0=4;MQRankSum=0.962;QD=4.91;ReadPosRankSum=-0.849;VQSLOD=-0.1454;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	./.	1/1:3,1:3:5.12:31,5,0	./.	./.	1/1:0,6:6:3.85:11,4,0	./.	1/1:1,0:1:3:27,3,0	1/1:0,3:3:1.31:5,1,0	1/1:0,3:3:5.04:33,5,0	./.	./.	1/1:0,2:2:0.47:1,0,0	./.	./.	./.	./.	1/1:2,0:2:3:25,3,0	0/0:0,1:1:2.74:0,3,12	./.	./.	./.	1/1:2,0:2:3.01:41,3,0	./.	1/1:1,0:1:2.99:23,3,0	1/1:2,0:2:2.99:24,3,0	0/0:0,4:4:1.75:0,2,8	./.
chr10	48085604	.	AT	A	1431.86	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.622;DP=754;FS=2.951;HRun=1;HaplotypeScore=72.7768;InbreedingCoeff=0.9998;MQ=79.67;MQ0=0;MQRankSum=-0.022;QD=37.68;ReadPosRankSum=-4.601;VQSLOD=2.2377;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:76.55:0,77,1375	0/0:12,0:12:36.12:0,36,575	0/0:24,0:24:69.20:0,69,1027	0/0:21,0:21:58.74:0,59,746	0/0:27,0:27:81.28:0,81,1294	0/0:29,0:29:84.24:0,84,1266	0/0:19,0:19:57.18:0,57,885	1/1:0,38:38:99:1527,111,0	0/0:30,0:30:90.17:0,90,1330	0/0:36,0:36:99:0,108,1705	0/0:22,0:22:66.17:0,66,983	0/0:25,0:25:75.24:0,75,1175	0/0:37,0:37:99:0,111,1725	0/0:26,0:26:78.20:0,78,1146	0/0:33,0:33:99:0,99,1552	0/0:27,0:27:81.28:0,81,1292	0/0:34,0:34:99:0,99,1556	0/0:14,0:14:39.10:0,39,596	0/0:17,0:17:51.17:0,51,812	0/0:36,0:36:99:0,108,1718	0/0:27,0:27:81.28:0,81,1291	0/0:32,0:32:96.15:0,96,1432	0/0:33,0:33:99:0,99,1531	0/0:22,0:22:66.20:0,66,1029	0/0:25,0:25:75.26:0,75,1198	0/0:27,0:27:81.25:0,81,1231	0/0:35,0:34:99:0,105,1598	0/0:14,0:13:42.07:0,42,617
chr10	48086602	.	AC	A	2144.02	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=7.094;DP=627;FS=5.283;HRun=9;HaplotypeScore=68.0869;InbreedingCoeff=0.9994;MQ=76.74;MQ0=0;MQRankSum=-0.017;QD=19.67;ReadPosRankSum=2.073;VQSLOD=4.2074;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:29:45.73:0,46,246	0/0:12,0:12:33.07:0,33,368	0/0:11,0:11:26.78:0,27,273	0/0:23,0:22:42.63:0,43,381	0/0:26,0:26:72.18:0,72,808	0/0:30,0:30:66.16:0,66,734	0/0:19,0:19:51.09:0,51,563	0/0:30,0:30:72.16:0,72,790	0/0:29,0:29:53.65:0,54,777	0/0:15,0:15:39.10:0,39,441	0/0:21,0:21:57.17:0,57,657	0/0:21,0:21:51.12:0,51,575	0/0:27,0:27:81.24:0,81,935	1/1:2,20:22:57.03:521,57,0	0/0:30,0:30:84.25:0,84,969	0/0:28,0:28:81.23:0,81,925	0/0:31,1:32:62.79:0,63,965	0/0:11,0:11:30.06:0,30,332	1/1:7,12:19:36.01:329,36,0	1/1:9,19:28:62.91:563,63,0	1/1:7,5:12:32.80:282,33,0	0/0:20,0:20:42.11:0,42,473	0/0:23,0:23:54.14:0,54,603	0/0:21,0:21:51.10:0,51,564	0/0:15,0:15:39.10:0,39,441	0/0:24,0:24:66.20:0,66,761	1/1:2,26:28:69:624,69,0	0/0:21,0:21:45.12:0,45,510
chr10	48087635	.	GC	G	62.94	PASS	AC=2;AF=0.037;AN=54;BaseQRankSum=1.118;DP=263;FS=0.000;HRun=3;HaplotypeScore=30.9041;InbreedingCoeff=0.5391;MQ=80.37;MQ0=0;MQRankSum=0.307;QD=10.49;ReadPosRankSum=-1.739;VQSLOD=0.6549;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:11:36.08:0,36,475	0/0:5,0:5:15.05:0,15,216	0/0:7,0:7:17.92:0,18,199	0/0:7,0:7:18.04:0,18,215	0/0:4,0:4:12.04:0,12,170	0/0:1,0:1:3.01:0,3,43	0/0:20,0:20:60.20:0,60,862	1/1:1,5:6:12.04:148,12,0	0/0:6,0:6:18.06:0,18,250	0/0:7,0:7:15.05:0,15,214	./.	0/0:4,0:4:12.04:0,12,173	0/0:4,0:4:12.04:0,12,172	0/0:9,0:9:27.09:0,27,381	0/0:6,0:6:18.06:0,18,259	0/0:4,0:4:12.04:0,12,173	0/0:23,0:23:69.19:0,69,947	0/0:21,0:21:60.04:0,60,784	0/0:13,0:13:30.09:0,30,409	0/0:2,0:2:6.01:0,6,68	0/0:44,0:44:99:0,126,1811	0/0:7,0:7:18.06:0,18,254	0/0:8,0:8:24.08:0,24,337	0/0:21,0:21:63.16:0,63,878	0/0:7,0:7:18.06:0,18,258	0/0:11,0:11:27.07:0,27,356	0/0:3,0:3:9.03:0,9,129	0/0:1,0:1:3.01:0,3,43
chr10	48088371	.	A	AT	3003.30	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-11.080;DP=548;FS=5.036;HRun=10;HaplotypeScore=60.7703;InbreedingCoeff=0.9923;MQ=78.84;MQ0=0;MQRankSum=-0.669;QD=19.76;ReadPosRankSum=-1.196;VQSLOD=4.2606;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:44:99:0,126,1014	0/0:10,0:12:26:0,26,203	0/0:21,0:21:23.12:0,23,205	0/0:14,0:14:13.31:0,13,150	0/0:16,0:16:38.92:0,39,318	0/0:15,0:15:44.94:0,45,367	0/0:18,0:18:44.94:0,45,369	1/1:8,30:37:74.33:896,74,0	1/1:2,15:17:20.43:411,20,0	0/0:21,0:21:56.92:0,57,467	0/0:18,0:18:50.91:0,51,415	1/1:2,16:18:29.68:320,30,0	1/1:2,11:15:26.80:253,27,0	0/0:18,0:18:47.89:0,48,388	0/0:19,0:19:53.89:0,54,437	1/1:3,11:14:26.78:288,27,0	0/0:15,0:14:38.87:0,39,311	0/0:23,0:24:52.95:0,53,424	0/0:21,0:21:55.95:0,56,447	0/0:20,0:20:47.56:0,48,386	0/0:18,0:18:50.93:0,51,416	1/1:1,16:17:33.03:333,33,0	1/1:4,18:22:17.27:391,17,0	1/1:0,11:11:30.07:319,30,0	0/0:25,0:25:68.86:0,69,559	0/0:20,0:20:56.93:0,57,468	0/0:24,0:24:62.87:0,63,511	0/0:11,0:11:26.93:0,27,217
chr10	48089887	.	TG	T	2664.32	PASS	AB=0.863;AC=32;AF=0.571;AN=56;BaseQRankSum=1.309;DP=442;FS=2.867;HRun=11;HaplotypeScore=60.4700;InbreedingCoeff=0.1196;MQ=79.48;MQ0=1;MQRankSum=-1.507;QD=7.81;ReadPosRankSum=4.549;VQSLOD=2.0488;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:19:17.97:0,18,159	0/1:6,4:10:53.14:53,0,78	0/0:18,0:15:19.02:0,19,187	0/0:21,0:18:6.07:0,6,228	0/1:17,0:17:9.54:10,0,78	0/1:15,0:15:2.52:3,0,156	0/1:16,2:19:18.78:19,0,292	0/1:20,1:21:2.73:3,0,155	1/1:9,4:15:30.97:230,31,0	0/0:13,0:13:11.92:0,12,111	0/1:12,1:14:21.58:22,0,137	1/1:4,10:14:35.94:293,36,0	1/1:6,10:16:3.96:239,4,0	1/1:4,8:12:32.92:264,33,0	0/1:12,5:17:50.92:51,0,87	0/0:11,0:16:29.64:0,30,256	0/0:11,1:12:2.30:0,2,204	0/1:10,1:11:21.41:21,0,125	1/1:9,6:16:25.96:200,26,0	1/1:9,12:22:37.18:274,37,0	1/1:6,9:15:20.93:172,21,0	0/1:11,2:13:28.26:28,0,120	1/1:8,6:14:20.96:172,21,0	1/1:5,8:13:29.94:244,30,0	0/1:19,3:22:45.95:73,0,46	0/1:14,4:18:71.51:72,0,121	1/1:13,6:20:45.76:347,46,0	0/1:4,3:7:48.99:59,0,49
chr10	48089990	.	T	TAAAA	5486.97	PASS	AB=0.884;AC=32;AF=0.571;AN=56;BaseQRankSum=0.066;DP=527;FS=10.276;HRun=15;HaplotypeScore=120.5916;InbreedingCoeff=0.6825;MQ=72.91;MQ0=0;MQRankSum=-1.720;QD=16.14;ReadPosRankSum=-4.175;VQSLOD=0.5834;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:19:35.60:0,36,273	0/0:4,0:5:8.63:0,9,92	0/1:23,0:14:6.33:6,0,96	0/1:13,0:10:15.06:20,0,15	1/1:18,14:39:82.39:1315,82,0	0/0:10,0:15:20.61:0,21,220	0/0:16,0:16:32.57:0,33,361	0/1:21,0:21:24.22:24,0,105	1/1:2,0:14:23.14:157,23,0	1/1:12,0:20:25.79:339,26,0	1/1:8,11:21:51.06:844,51,0	1/1:7,0:12:25.26:150,25,0	1/1:8,0:13:25.26:190,25,0	0/0:13,0:15:32.63:0,33,359	0/0:19,0:22:40.79:0,41,447	0/1:5,0:19:16.02:16,0,67	1/1:4,0:12:9:153,9,0	1/1:7,9:18:5.31:311,5,0	0/0:18,0:18:14.64:0,15,346	0/0:29,0:30:46.26:0,46,533	0/0:15,0:15:29.59:0,30,325	1/1:9,0:19:21.92:152,22,0	1/1:14,0:22:34.49:224,34,0	1/1:2,0:7:11.78:107,12,0	1/1:8,0:21:15.05:211,15,0	1/1:10,14:28:58.95:914,59,0	0/0:30,0:32:53.88:0,54,587	1/1:13,2:15:18.06:354,18,0
chr10	48090169	.	TCA	T	3902.31	PASS	AB=0.913;AC=16;AF=0.286;AN=56;BaseQRankSum=9.587;DP=638;FS=4.085;HRun=0;HaplotypeScore=79.8183;InbreedingCoeff=0.7085;MQ=68.33;MQ0=4;MQRankSum=1.613;QD=19.71;ReadPosRankSum=-1.064;VQSLOD=3.4997;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,24:27:63.19:756,63,0	0/0:12,1:13:30.10:0,30,480	0/0:39,0:24:22.86:0,23,364	0/0:34,0:22:36.11:0,36,532	0/0:16,2:18:0.15:0,0,492	0/0:13,0:14:33.10:0,33,506	0/0:21,2:23:12.18:0,12,684	1/1:18,15:34:24.01:504,24,0	0/0:17,0:17:45.15:0,45,720	0/0:21,1:22:9.17:0,9,632	0/0:19,0:19:51.17:0,51,815	0/0:27,1:27:27.23:0,27,913	0/0:28,1:29:39.26:0,39,1088	1/1:6,16:22:48.15:576,48,0	0/0:29,1:31:45.28:0,45,1186	0/0:27,2:29:3.79:0,4,1001	0/0:16,0:16:42.14:0,42,664	0/0:17,0:17:33.11:0,33,527	1/1:8,11:19:33.10:396,33,0	1/1:4,16:20:0.15:492,0,0	1/1:5,8:13:24.07:288,24,0	0/0:18,0:18:48.16:0,48,764	0/1:13,1:15:16.57:17,0,377	0/0:14,0:14:39.13:0,39,613	0/0:24,0:24:54.18:0,54,846	0/0:33,1:34:45.28:0,45,1191	1/1:10,30:40:72.22:864,72,0	0/1:7,1:8:11.90:12,0,306
chr10	48090892	.	CT	C	4419.62	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=10.924;DP=710;FS=1.047;HRun=9;HaplotypeScore=75.9593;InbreedingCoeff=0.9909;MQ=76.29;MQ0=0;MQRankSum=-2.272;QD=22.32;ReadPosRankSum=-1.850;VQSLOD=4.9396;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,17:22:48.02:439,48,0	0/0:15,0:15:42.12:0,42,485	0/0:20,0:20:36.93:0,37,444	0/0:15,0:14:24.07:0,24,274	0/0:33,0:33:93.23:0,93,1050	0/0:33,0:33:90.17:0,90,1001	0/0:24,0:24:63.17:0,63,716	1/1:4,29:33:87.01:787,87,0	0/0:19,0:19:48.14:0,48,554	0/0:28,0:28:75.22:0,75,866	0/0:33,0:33:87.25:0,87,996	0/0:24,0:24:72.21:0,72,831	0/0:33,0:33:90.26:0,90,1029	1/1:3,14:17:10.41:350,10,0	0/0:30,0:30:87.24:0,87,988	0/0:40,0:39:99:0,111,1260	0/0:14,0:15:38.93:0,39,419	0/0:9,0:9:21.06:0,21,242	1/1:6,31:37:93.01:840,93,0	1/1:4,36:40:99:988,108,0	1/1:3,20:23:51.02:467,51,0	0/0:20,0:20:57.15:0,57,641	0/0:34,1:35:65.80:0,66,999	0/0:24,0:24:72.19:0,72,811	0/0:19,0:19:54.16:0,54,623	0/0:29,0:29:87.24:0,87,988	1/1:2,24:26:60.02:549,60,0	0/0:14,0:14:42.07:0,42,460
chr10	48092019	.	TC	T	5548.43	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=9.739;DP=765;FS=2.395;HRun=3;HaplotypeScore=69.0808;InbreedingCoeff=1.0000;MQ=59.71;MQ0=13;MQRankSum=1.868;QD=29.67;ReadPosRankSum=-0.321;VQSLOD=4.2325;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,35:41:90.28:1116,90,0	0/0:17,0:17:48.16:0,48,691	0/0:25,0:18:54.13:0,54,725	0/0:28,0:23:68.98:0,69,884	0/0:31,0:31:81.27:0,81,1163	0/0:19,0:18:41.99:0,42,586	0/0:22,0:19:39.12:0,39,544	0/0:30,0:26:72.23:0,72,1021	0/0:20,0:20:60.19:0,60,847	0/0:31,0:31:87.29:0,87,1250	0/0:25,0:25:63.21:0,63,907	0/0:27,0:27:78.26:0,78,1115	0/0:36,0:36:84.28:0,84,1204	1/1:6,14:20:39.12:483,39,0	0/0:20,0:20:60.20:0,60,860	0/0:28,0:27:78.26:0,78,1123	0/0:29,0:29:81.27:0,81,1162	0/0:30,0:30:87.28:0,87,1235	1/1:0,32:31:93.25:1125,93,0	1/1:5,21:25:60.19:744,60,0	1/1:4,30:34:84.26:1041,84,0	0/0:23,0:23:57.18:0,57,797	0/0:25,0:25:63.21:0,63,906	0/0:34,0:34:93.27:0,93,1316	0/0:27,0:27:78.26:0,78,1123	0/0:37,0:37:96.32:0,96,1383	1/1:4,30:34:84.26:1040,84,0	0/0:14,0:13:39.13:0,39,561
chr10	48092687	.	GAA	G	5967.78	PASS	AB=0.633;AC=40;AF=0.714;AN=56;BaseQRankSum=2.092;DP=540;FS=0.000;HRun=15;HaplotypeScore=85.6315;InbreedingCoeff=0.7790;MQ=55.23;MQ0=8;MQRankSum=2.545;QD=13.81;ReadPosRankSum=6.689;VQSLOD=3.8820;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:36:67.63:288,68,0	0/0:8,0:11:22.88:0,23,276	0/0:9,0:2:3.01:0,3,41	0/0:9,0:7:10.65:0,11,96	1/1:8,16:23:34.84:315,35,0	0/0:19,0:22:59.55:0,60,705	0/0:13,0:15:32.02:0,32,350	0/1:7,5:20:64.56:65,0,147	1/1:2,11:14:29.69:250,30,0	1/1:4,24:27:65.81:574,66,0	1/1:4,10:15:15.79:185,16,0	1/1:5,14:20:35.69:301,36,0	1/1:6,16:22:43.46:373,43,0	1/1:8,17:25:38.54:328,39,0	0/0:20,0:23:53.58:0,54,638	0/0:18,0:18:36:0,36,313	1/1:5,20:29:41.55:462,42,0	1/1:5,11:16:26.88:238,27,0	0/1:9,8:17:13.17:164,0,13	1/1:6,15:23:20.52:273,21,0	1/1:2,8:12:23.68:196,24,0	1/1:2,12:14:12.30:266,12,0	1/1:11,12:24:26.60:223,27,0	1/1:3,22:27:44.74:485,45,0	1/1:3,16:20:35.63:349,36,0	1/1:4,10:16:32.34:252,32,0	1/1:5,8:13:17.88:158,18,0	1/1:2,9:11:26.72:223,27,0
chr10	48093318	.	CAA	C	1832.73	PASS	AB=0.946;AC=15;AF=0.268;AN=56;BaseQRankSum=1.925;DP=546;FS=9.699;HRun=15;HaplotypeScore=74.4879;InbreedingCoeff=0.7613;MQ=61.81;MQ0=9;MQRankSum=1.773;QD=11.11;ReadPosRankSum=3.548;VQSLOD=1.9829;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,27:36:42.76:500,43,0	0/0:16,0:16:18.17:0,18,471	0/1:8,0:5:11.67:12,0,31	0/1:3,0:2:8.69:9,0,27	0/0:16,0:19:42.91:0,43,481	0/0:21,0:24:65.69:0,66,832	0/0:16,0:20:46.43:0,46,516	0/0:19,0:28:50.99:0,51,508	0/0:13,1:18:32.51:0,33,365	0/0:16,0:17:18:0,18,196	0/0:15,1:16:6.65:0,7,351	0/0:19,0:19:44.99:0,45,519	0/0:13,0:15:29.53:0,30,350	1/1:6,9:14:18.39:160,18,0	0/0:19,0:20:35.11:0,35,420	0/0:7,0:21:33.06:0,33,350	0/0:29,0:30:65.46:0,65,781	0/0:10,0:10:23.56:0,24,288	1/1:5,15:21:33.20:335,33,0	1/1:4,15:23:53.16:428,53,0	1/1:4,10:14:20.94:185,21,0	0/0:17,0:16:24.08:0,24,318	0/0:16,0:20:34.04:0,34,332	0/0:23,0:24:47.59:0,48,599	0/0:18,0:21:45.02:0,45,491	0/0:16,0:18:33.10:0,33,423	1/1:11,16:29:46.74:393,47,0	0/1:14,1:14:0.18:0,0,246
chr10	48094619	.	GA	G	4935.41	PASS	AB=0.566;AC=42;AF=0.750;AN=56;BaseQRankSum=5.725;DP=341;FS=0.724;HRun=11;HaplotypeScore=47.0939;InbreedingCoeff=0.7456;MQ=57.72;MQ0=7;MQRankSum=-2.763;QD=17.02;ReadPosRankSum=2.359;VQSLOD=5.5961;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,0:22:30.56:88,31,0	0/0:8,0:8:21.05:0,21,224	0/0:11,0:6:15.87:0,16,139	0/0:5,0:1:2.68:0,3,11	1/1:4,12:16:35.95:296,36,0	0/0:9,0:9:21.05:0,21,224	0/0:12,0:12:33.05:0,33,340	1/1:5,0:25:39.92:121,40,0	1/1:2,3:4:8.99:74,9,0	0/1:5,14:19:17.84:275,0,18	1/1:2,15:17:49.92:387,50,0	1/1:1,7:8:20.98:172,21,0	1/1:1,4:5:11.99:99,12,0	1/1:1,8:9:26.01:203,26,0	0/0:6,0:6:18.05:0,18,192	1/1:3,7:10:23.95:193,24,0	1/1:4,15:18:44.31:352,44,0	1/1:4,12:16:41.89:338,42,0	1/1:6,4:9:23.89:186,24,0	0/1:2,8:10:14.02:105,0,14	1/1:0,4:4:11.99:98,12,0	1/1:2,14:16:41.95:345,42,0	1/1:1,12:13:32.95:271,33,0	1/1:3,5:9:14.02:104,14,0	1/1:2,14:16:44.94:369,45,0	1/1:1,17:18:21.95:387,22,0	1/1:1,12:14:37.98:301,38,0	1/1:0,7:7:20.97:172,21,0
chr10	48094669	.	T	TA	4039.57	PASS	AB=0.879;AC=32;AF=0.571;AN=56;BaseQRankSum=-0.494;DP=475;FS=3.670;HRun=12;HaplotypeScore=67.9459;InbreedingCoeff=0.6767;MQ=67.41;MQ0=4;MQRankSum=-1.721;QD=14.08;ReadPosRankSum=1.659;VQSLOD=4.3424;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,1:29:23.16:0,23,321	0/0:7,0:7:17.89:0,18,131	0/0:26,0:15:18.93:0,19,102	0/1:22,0:9:20.12:24,0,20	1/1:11,8:19:9.95:246,10,0	0/0:11,0:11:6.56:0,7,172	0/0:14,0:14:32.79:0,33,241	0/0:31,0:30:39.24:0,39,452	1/1:3,7:10:21.03:204,21,0	1/1:9,7:18:10.81:240,11,0	0/1:14,10:24:9.06:368,0,9	1/1:9,6:15:18.12:268,18,0	1/1:3,10:13:22.28:207,22,0	0/0:14,0:14:17.54:0,18,206	0/0:15,0:15:30.71:0,31,221	1/1:0,11:11:33.05:321,33,0	1/1:6,16:22:22.53:366,23,0	1/1:4,12:17:36.78:337,37,0	0/0:18,0:20:4.70:0,5,170	0/0:21,0:21:42.57:0,43,305	0/1:9,1:10:5.37:5,0,126	1/1:7,9:16:11.43:244,11,0	1/1:6,5:12:14.19:168,14,0	1/1:2,5:7:17.70:165,18,0	1/1:8,12:21:41.85:383,42,0	1/1:19,6:25:38.93:351,39,0	0/1:16,2:18:12.09:12,0,258	1/1:2,4:7:14.86:131,15,0
chr10	48095914	.	C	CA	13987.32	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=-12.052;DP=619;FS=6.026;HRun=7;HaplotypeScore=59.6117;InbreedingCoeff=0.9982;MQ=79.94;MQ0=0;MQRankSum=-2.266;QD=30.74;ReadPosRankSum=3.204;VQSLOD=5.2814;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,11:15:29.96:341,30,0	0/0:7,0:7:18:0,18,166	0/0:29,0:23:35.14:0,35,293	0/0:34,0:27:49.49:0,49,415	1/1:0,28:28:72.09:820,72,0	0/0:22,0:22:57.06:0,57,543	0/0:21,0:21:54.08:0,54,521	1/1:2,37:39:82.66:1248,83,0	1/1:1,17:18:51.16:615,51,0	1/1:1,16:17:48.15:580,48,0	1/1:1,19:20:54.12:636,54,0	1/1:3,24:27:66.20:797,66,0	1/1:4,24:28:72.22:870,72,0	1/1:1,14:15:39.12:471,39,0	0/0:24,0:24:66.09:0,66,632	0/0:26,0:26:69.11:0,69,666	1/1:5,10:15:36.11:431,36,0	1/1:0,20:20:57.17:688,57,0	1/1:2,20:22:60.18:725,60,0	1/1:5,22:27:31.17:640,31,0	1/1:4,18:24:54.07:619,54,0	1/1:2,14:16:42.04:475,42,0	1/1:2,15:17:36.11:435,36,0	1/1:0,15:15:42.13:507,42,0	1/1:0,19:19:54.16:649,54,0	1/1:1,26:27:78.22:928,78,0	1/1:3,25:28:75.23:906,75,0	1/1:0,18:18:51.14:605,51,0
chr10	48096881	.	T	TA	8829.94	PASS	AB=0.701;AC=43;AF=0.768;AN=56;BaseQRankSum=-7.515;DP=480;FS=3.206;HRun=10;HaplotypeScore=54.7184;InbreedingCoeff=0.6939;MQ=74.60;MQ0=7;MQRankSum=-0.482;QD=21.80;ReadPosRankSum=-1.079;VQSLOD=5.4587;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,28:30:66.17:704,66,0	0/0:4,0:4:8.99:0,9,74	0/1:21,0:12:31.85:32,0,54	0/0:23,0:14:19.17:0,19,118	1/1:4,15:19:45.05:465,45,0	0/0:18,1:19:18.95:0,19,362	0/0:10,0:10:29.97:0,30,246	1/1:12,24:32:75.13:767,75,0	1/1:0,13:14:38.94:399,39,0	1/1:4,16:20:45.11:479,45,0	1/1:2,18:20:51.12:538,51,0	1/1:0,11:11:33.08:352,33,0	1/1:3,14:17:26.87:284,27,0	1/1:4,8:12:5.42:255,5,0	0/0:17,0:17:43.75:0,44,347	0/1:2,9:11:0.57:200,0,1	1/1:1,23:23:57.14:608,57,0	0/1:4,17:20:6.84:425,0,7	1/1:6,16:21:45.05:449,45,0	1/1:1,13:14:38.92:377,39,0	1/1:1,5:6:9.02:96,9,0	1/1:1,4:5:9.02:96,9,0	1/1:1,10:11:24.02:244,24,0	1/1:1,4:5:12.03:128,12,0	1/1:3,16:19:42.10:446,42,0	1/1:2,16:18:26.49:487,26,0	1/1:4,19:24:40.24:498,40,0	1/1:7,18:25:42.08:504,42,0
chr10	48097162	.	GA	G	4791.98	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=14.104;DP=614;FS=5.913;HRun=7;HaplotypeScore=58.4090;InbreedingCoeff=0.9970;MQ=65.73;MQ0=1;MQRankSum=0.085;QD=26.48;ReadPosRankSum=-0.416;VQSLOD=5.3585;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,36:37:99:1010,99,0	0/0:5,0:5:15.03:0,15,175	0/0:21,0:20:60.18:0,60,724	0/0:12,0:12:30.06:0,30,348	0/0:26,0:26:78.24:0,78,969	0/0:29,0:29:78.22:0,78,954	0/0:13,0:13:39.11:0,39,478	1/1:4,28:32:84.13:828,84,0	0/0:20,0:20:54.16:0,54,663	0/0:24,0:24:60.19:0,60,755	0/0:25,0:25:72.23:0,72,906	0/0:24,0:24:66.21:0,66,826	0/0:17,0:17:51.15:0,51,630	1/1:2,16:18:48.11:489,48,0	0/0:27,0:27:66.21:0,66,830	0/0:25,0:25:72.23:0,72,905	0/0:21,0:21:63.20:0,63,792	0/0:22,0:22:63.20:0,63,792	1/1:5,14:18:42.09:428,42,0	1/1:0,21:21:60.05:598,60,0	1/1:1,21:22:60.14:612,60,0	0/0:16,0:16:45.14:0,45,566	0/0:26,0:26:75.22:0,75,930	0/0:22,0:22:63.20:0,63,789	0/0:16,0:16:45.14:0,45,566	0/0:29,1:30:53.63:0,54,964	1/1:5,27:32:81.17:826,81,0	0/0:12,0:12:36.12:0,36,453
chr10	48099026	.	G	GC	8859.69	PASS	AC=40;AF=0.741;AN=54;BaseQRankSum=17.303;DP=584;FS=8.020;HRun=1;HaplotypeScore=199.7355;InbreedingCoeff=0.9881;MQ=81.53;MQ0=3;MQRankSum=-17.974;QD=22.04;ReadPosRankSum=-0.194;VQSLOD=3.8710;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,18:20:47.93:409,48,0	0/0:4,0:4:12.04:0,12,156	0/0:19,0:19:55.99:0,56,687	0/0:31,0:30:75.11:0,75,910	1/1:2,11:13:15.24:117,15,0	0/0:26,0:26:78.24:0,78,997	0/0:34,0:34:93.30:0,93,1208	1/1:3,25:28:84.15:848,84,0	1/1:6,23:29:80.87:708,81,0	1/1:5,15:20:60.05:591,60,0	1/1:2,15:16:35.89:287,36,0	1/1:3,23:25:62.82:522,63,0	1/1:8,23:31:86.82:754,87,0	1/1:3,19:22:62.84:506,63,0	0/0:41,0:41:99:0,117,1504	0/0:27,0:27:81.26:0,81,1050	1/1:4,13:17:38.92:354,39,0	1/1:1,6:7:21.03:210,21,0	1/1:4,4:8:21.01:193,21,0	1/1:5,14:19:49.81:421,50,0	1/1:10,12:22:41.24:314,41,0	1/1:0,10:11:26.93:217,27,0	1/1:5,13:18:32.87:254,33,0	1/1:1,13:14:17.75:142,18,0	1/1:2,21:23:65.90:555,66,0	1/1:2,19:21:62.65:577,63,0	1/1:6,28:34:99:880,102,0	./.
chr10	48099028	.	AGAGTGT	A	16774.90	PASS	AC=40;AF=0.741;AN=54;BaseQRankSum=16.379;DP=523;FS=7.381;HRun=0;HaplotypeScore=191.1703;InbreedingCoeff=0.9803;MQ=86.59;MQ0=3;MQRankSum=-17.739;QD=49.19;ReadPosRankSum=1.532;VQSLOD=4.3119;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,15:16:45.15:788,45,0	0/0:5,0:5:15.05:0,15,540	0/0:20,0:20:60.14:0,60,2001	0/0:32,0:31:81.28:0,81,2569	1/1:0,11:11:11.74:221,12,0	0/0:25,0:25:75.24:0,75,2733	0/0:32,0:32:96.33:0,96,3535	1/1:2,25:27:81.24:1570,81,0	1/1:1,23:24:70.08:1259,70,0	1/1:1,15:16:48.16:949,48,0	1/1:1,15:15:33.11:612,33,0	1/1:4,18:21:54.19:1017,54,0	1/1:3,23:26:76.14:1403,76,0	1/1:1,19:20:60.21:1132,60,0	0/0:40,0:40:99:0,120,4274	0/0:28,0:28:84.24:0,84,2748	1/1:1,13:14:31.78:546,32,0	1/1:0,6:6:18.06:363,18,0	1/1:0,4:4:12.04:248,12,0	1/1:1,14:16:48.16:871,48,0	1/1:0,12:12:27.56:480,28,0	1/1:1,10:11:27.09:504,27,0	1/1:0,13:13:27.09:500,27,0	1/1:0,13:13:14.84:279,15,0	1/1:1,21:22:63.22:1203,63,0	1/1:3,18:20:60.18:1136,60,0	1/1:2,28:30:90.31:1694,90,0	./.
chr10	48099033	.	G	GCC	2556.17	PASS	AC=40;AF=0.741;AN=54;BaseQRankSum=17.166;DP=529;FS=3.018;HRun=0;HaplotypeScore=207.3811;InbreedingCoeff=0.9534;MQ=86.41;MQ0=1;MQRankSum=-17.027;QD=7.24;ReadPosRankSum=1.014;VQSLOD=3.2643;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:20:42.67:286,43,0	0/0:5,0:5:15.05:0,15,245	0/0:21,0:21:62:0,62,915	0/0:31,0:30:63.63:0,64,1062	1/1:12,0:12:7.02:22,7,0	0/0:25,0:25:75.24:0,75,1196	0/0:33,0:33:90.31:0,90,1463	1/1:27,0:27:60.45:243,60,0	1/1:25,0:25:45.64:152,46,0	1/1:17,0:17:38.29:162,38,0	1/1:16,0:15:20.04:59,20,0	1/1:19,0:19:33.17:100,33,0	1/1:25,0:25:52.18:222,52,0	1/1:19,1:20:40.10:168,40,0	0/0:37,0:37:99:0,111,1756	0/0:24,0:24:72.22:0,72,1126	1/1:15,0:15:19.22:88,19,0	1/1:6,0:6:13.59:45,14,0	1/1:4,0:4:9.71:33,10,0	1/1:16,0:16:22.53:152,23,0	1/1:12,4:17:19.88:136,20,0	1/1:12,0:12:19.71:74,20,0	1/1:14,0:14:19.38:91,19,0	1/1:13,0:13:9.55:30,10,0	1/1:21,2:23:42.50:169,42,0	1/1:20,3:24:53.88:314,54,0	1/1:28,0:28:59.56:210,60,0	./.
chr10	48099703	.	AT	A	8690.83	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=8.084;DP=701;FS=7.009;HRun=8;HaplotypeScore=77.2440;InbreedingCoeff=0.9973;MQ=73.41;MQ0=0;MQRankSum=-0.533;QD=25.05;ReadPosRankSum=4.491;VQSLOD=5.4847;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,114,1350	0/0:6,0:6:15.05:0,15,181	0/0:16,0:16:27.08:0,27,313	0/0:16,0:16:42.11:0,42,487	1/1:1,23:24:69.06:657,69,0	0/0:29,0:29:81.25:0,81,978	0/0:32,0:32:90.24:0,90,1044	0/0:34,0:34:84.25:0,84,1006	1/1:1,18:19:45.07:435,45,0	1/1:3,32:35:93.13:892,93,0	1/1:2,10:12:27.04:261,27,0	1/1:6,27:33:78.11:753,78,0	1/1:2,23:25:54.08:522,54,0	0/0:27,0:28:84.12:0,84,990	0/0:22,1:23:62.99:0,63,725	0/0:32,0:32:61.56:0,62,1000	1/1:3,41:44:99:1130,117,0	1/1:0,10:10:30.05:290,30,0	0/0:23,1:24:31.17:0,31,633	0/0:22,0:22:66.20:0,66,797	0/0:23,0:23:60.18:0,60,725	1/1:2,19:21:57.09:550,57,0	1/1:3,21:24:56.92:536,57,0	1/1:2,34:36:96.15:927,96,0	1/1:2,23:25:66.10:637,66,0	1/1:1,29:30:87.14:840,87,0	0/0:31,0:31:84.24:0,84,1002	1/1:0,9:9:27.04:261,27,0
chr10	48101413	.	C	CAG	3746.42	PASS	AB=0.963;AC=34;AF=0.630;AN=54;BaseQRankSum=5.430;DP=697;FS=5.704;HRun=0;HaplotypeScore=122.9840;InbreedingCoeff=0.3236;MQ=53.24;MQ0=25;MQRankSum=-0.327;QD=7.03;ReadPosRankSum=0.866;VQSLOD=3.1560;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:22,1:22:8.33:52,8,0	0/0:14,0:14:24.07:0,24,293	0/1:24,0:12:0:0,0,0	0/1:33,0:17:0.59:1,0,66	./.	0/0:29,0:29:66.09:0,66,754	0/0:16,0:15:27.06:0,27,316	0/0:44,0:39:6.65:0,7,389	1/1:28,1:28:23.12:339,23,0	1/1:44,2:43:72.90:846,73,0	0/1:42,0:36:0:0,0,0	0/1:18,1:18:9.40:90,0,9	1/1:8,8:13:12.04:164,12,0	1/1:14,1:15:14.24:176,14,0	0/1:24,0:25:0.61:1,0,505	0/0:24,0:24:36.02:0,36,429	0/1:21,0:19:12.31:39,0,12	1/1:12,0:9:8.99:113,9,0	0/1:15,4:17:5.43:341,0,5	0/1:25,2:26:3.73:227,0,4	1/1:15,1:16:3.46:42,3,0	1/1:22,0:21:3.01:38,3,0	0/1:29,0:26:14.09:256,0,14	1/1:24,0:21:6.02:92,6,0	0/1:21,2:22:12.58:290,0,13	1/1:29,0:31:31.99:401,32,0	1/1:10,17:27:15.05:229,15,0	1/1:9,0:5:0.96:9,1,0
chr10	48101417	.	GAGAGAGAGAGAC	G	3804.74	PASS	AB=0.976;AC=26;AF=0.500;AN=52;BaseQRankSum=2.370;DP=711;FS=1.517;HRun=0;HaplotypeScore=199.6932;InbreedingCoeff=0.0501;MQ=51.11;MQ0=28;MQRankSum=1.060;QD=7.73;ReadPosRankSum=2.390;VQSLOD=2.6659;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:22:12.56:104,13,0	0/0:13,0:13:24.97:0,25,536	./.	0/0:30,0:15:6.97:0,7,78	./.	0/0:31,0:30:72.24:0,72,1663	0/0:18,0:17:30.07:0,30,610	0/1:42,0:37:2.01:2,0,245	0/1:31,0:29:15.45:317,0,15	0/1:49,0:45:99:979,0,145	0/1:27,18:38:0.01:0,0,0	0/1:22,0:21:27.96:28,0,88	0/1:18,0:14:99:132,0,128	1/1:15,0:15:9.40:144,9,0	0/0:25,0:25:48.09:0,48,1413	0/0:21,0:21:36.11:0,36,544	0/1:22,0:20:49.80:59,0,50	0/1:12,0:9:7.40:102,0,7	0/1:19,0:17:65.59:229,0,66	1/1:30,0:28:9.01:237,9,0	1/1:14,0:14:4.26:45,4,0	0/0:16,9:24:3.01:0,3,65	0/1:30,0:27:99:281,0,148	0/1:23,0:20:38.42:131,0,38	1/1:28,0:26:11.98:328,12,0	0/1:35,0:35:99:501,0,193	1/1:24,0:24:15.03:169,15,0	1/1:10,0:6:1:17,1,0
chr10	48101427	.	GAC	G	1590.59	PASS	AB=0.924;AC=24;AF=0.444;AN=54;BaseQRankSum=7.341;DP=683;FS=2.010;HRun=0;HaplotypeScore=128.0427;InbreedingCoeff=-0.0331;MQ=44.92;MQ0=28;MQRankSum=1.123;QD=3.91;ReadPosRankSum=0.709;VQSLOD=2.5234;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,2:20:12.29:94,12,0	0/0:13,0:13:23.47:0,23,439	1/1:5,0:1:0.47:1,0,0	0/0:15,0:6:0.01:0,0,39	./.	0/0:34,0:33:47.55:0,48,1034	0/0:24,0:22:41.99:0,42,552	0/0:34,0:28:44.51:0,45,420	0/1:34,0:31:20.49:167,0,20	0/1:46,3:45:80.38:360,0,80	0/0:45,4:41:0.89:0,1,2	0/1:20,0:19:33.96:34,0,73	0/1:18,0:14:5.14:5,0,87	1/1:14,0:14:9.68:77,10,0	0/0:25,0:25:62.69:0,63,885	0/0:21,0:21:36.05:0,36,541	0/1:8,12:18:7.25:7,0,69	1/1:10,1:8:7.02:62,7,0	0/1:21,0:17:28.83:100,0,29	0/1:24,1:23:9.46:69,0,9	1/1:14,0:14:4.81:29,5,0	0/0:24,1:23:3.01:0,3,38	0/1:29,2:28:61.50:86,0,61	0/1:8,13:18:29.92:30,0,59	1/1:27,2:27:2.85:151,3,0	0/1:42,0:40:45.71:440,0,46	0/1:21,0:21:20.98:27,0,21	0/1:10,0:5:9.59:10,0,10
chr10	48101439	.	GAGAC	G	2094.34	PASS	AB=0.975;AC=26;AF=0.520;AN=50;BaseQRankSum=7.293;DP=668;FS=2.812;HRun=0;HaplotypeScore=145.2956;InbreedingCoeff=0.0583;MQ=40.01;MQ0=26;MQRankSum=-3.646;QD=4.52;ReadPosRankSum=-0.505;VQSLOD=2.6676;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:22:12.29:93,12,0	0/0:13,0:13:24.08:0,24,224	./.	./.	./.	0/0:29,0:28:62.88:0,63,1102	0/0:24,0:22:36:0,36,641	0/1:37,0:29:8.32:121,0,8	0/1:30,0:26:99:101,0,105	0/1:48,1:45:31.68:546,0,32	0/0:50,3:45:0.89:0,1,2	0/1:21,1:21:84.96:85,0,166	0/1:18,0:14:12.17:12,0,235	1/1:16,0:15:4.59:50,5,0	0/0:24,0:24:57.08:0,57,1001	0/0:17,1:17:20.17:0,20,215	0/1:18,1:17:12.64:56,0,13	1/1:10,0:7:0.41:23,0,0	0/1:25,0:20:19.09:169,0,19	1/1:27,0:25:7.11:40,7,0	1/1:16,0:15:1.55:4,2,0	0/1:27,0:25:12.97:13,0,49	0/1:31,3:31:99:104,0,142	0/1:15,1:13:35.93:36,0,130	1/1:24,1:23:14.99:127,15,0	1/1:45,0:43:12.56:529,13,0	1/1:23,0:23:23.98:147,24,0	0/0:10,0:5:2.19:0,2,8
chr10	48101441	.	GAC	G	2053.14	PASS	AB=0.941;AC=25;AF=0.500;AN=50;BaseQRankSum=5.510;DP=667;FS=4.927;HRun=0;HaplotypeScore=130.2737;InbreedingCoeff=0.0121;MQ=39.73;MQ0=28;MQRankSum=-1.150;QD=4.51;ReadPosRankSum=-1.156;VQSLOD=2.7106;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:21,2:21:12.29:94,12,0	0/0:12,0:12:23.92:0,24,201	./.	./.	./.	0/0:29,0:28:62.86:0,63,813	0/0:27,0:25:38.98:0,39,543	0/1:37,0:27:99:108,0,99	0/1:28,2:26:51.94:124,0,52	0/1:46,1:43:65.28:467,0,65	0/0:51,2:45:0.89:0,1,2	0/1:21,1:21:91.51:92,0,150	0/0:16,0:12:6.16:0,6,221	1/1:18,0:17:4.34:47,4,0	0/0:24,0:24:47.16:0,47,797	0/0:18,0:17:8.87:0,9,182	0/1:20,0:18:30.58:69,0,31	1/1:9,1:7:2.45:37,2,0	0/1:25,0:20:34.37:111,0,34	1/1:27,0:25:8.99:44,9,0	1/1:16,0:14:1.82:5,2,0	0/1:25,3:26:10:10,0,65	0/1:34,0:31:99:104,0,105	0/1:15,0:12:35.93:36,0,86	1/1:23,2:23:17.98:152,18,0	0/1:12,32:42:14.19:625,0,14	1/1:23,0:23:12.05:87,12,0	0/1:10,0:5:2.55:3,0,13
chr10	48101443	.	CAGAG	C	564.22	PASS	AB=0.944;AC=13;AF=0.271;AN=48;BaseQRankSum=4.554;DP=669;FS=5.989;HRun=0;HaplotypeScore=149.2507;InbreedingCoeff=0.2044;MQ=39.97;MQ0=29;MQRankSum=-2.454;QD=2.15;ReadPosRankSum=2.034;VQSLOD=1.9846;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:21,1:22:0.34:1,0,0	0/0:10,0:11:6.02:0,6,95	./.	./.	1/1:31,0:29:0.47:1,0,0	0/0:28,0:29:42.13:0,42,924	0/0:24,0:26:24.08:0,24,504	0/0:34,0:24:38.62:0,39,274	0/1:29,0:26:3.98:4,0,160	0/1:44,0:41:99:120,0,186	./.	0/0:22,0:21:18.14:0,18,257	0/0:16,0:12:15.15:0,15,316	1/1:6,12:17:5.84:93,6,0	0/0:23,0:24:41.91:0,42,790	0/0:17,0:16:14.70:0,15,112	1/1:19,0:17:4.93:32,5,0	0/0:10,0:8:8.03:0,8,57	0/1:22,4:20:61.75:155,0,62	0/0:22,5:25:1.39:0,1,4	./.	0/0:29,0:27:11.07:0,11,154	0/0:35,0:32:12:0,12,189	0/0:16,0:13:9.02:0,9,167	0/0:24,0:23:3.47:0,3,25	0/1:43,0:42:79.34:121,0,79	0/1:20,3:23:13.24:164,0,13	0/0:12,0:7:5.70:0,6,30
chr10	48101459	.	G	GAC	80.44	PASS	AB=0.989;AC=10;AF=0.192;AN=52;BaseQRankSum=6.477;DP=662;FS=4.473;HRun=0;HaplotypeScore=130.1628;InbreedingCoeff=0.0500;MQ=40.49;MQ0=32;MQRankSum=-6.781;QD=0.38;ReadPosRankSum=1.381;VQSLOD=2.0324;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:15:0.28:1,0,0	0/0:7,0:7:12.01:0,12,142	./.	./.	0/0:31,1:28:11.97:0,12,96	0/0:26,0:25:54.11:0,54,716	0/0:23,0:21:26.90:0,27,388	0/0:34,0:23:65.55:0,66,684	0/0:28,0:25:9.26:0,9,231	0/1:41,1:39:82.49:82,0,360	0/0:46,0:38:8.98:0,9,74	0/0:21,1:21:17.28:0,17,262	0/0:16,0:13:23.35:0,23,284	0/0:20,0:18:7.54:0,8,63	0/0:31,0:31:66.06:0,66,790	0/0:24,0:22:41.32:0,41,328	0/0:18,0:16:13.50:0,13,89	0/1:13,0:10:10.48:10,0,55	0/1:28,0:24:48.46:48,0,202	1/1:23,0:21:2.73:16,3,0	0/0:18,0:18:8.98:0,9,73	0/0:31,0:29:15.03:0,15,188	0/0:28,2:27:15:0,15,177	0/0:16,1:14:18.01:0,18,191	0/0:25,0:23:19.52:0,20,150	0/1:47,1:46:9.07:9,0,452	0/1:25,0:25:25.21:25,0,151	0/1:12,0:8:12.30:12,0,34
chr10	48101491	.	GAGAC	G	1367.96	PASS	AB=0.641;AC=3;AF=0.054;AN=56;BaseQRankSum=8.282;DP=728;FS=3.298;HRun=0;HaplotypeScore=123.7934;InbreedingCoeff=0.4396;MQ=56.74;MQ0=31;MQRankSum=-3.533;QD=18.74;ReadPosRankSum=-2.678;VQSLOD=3.1957;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:25:33.38:0,33,637	0/0:8,0:8:6.85:0,7,367	0/0:52,0:11:18.40:0,18,227	0/0:53,0:18:0.53:0,1,76	0/0:22,0:20:33.11:0,33,664	0/0:29,0:28:72.08:0,72,1291	0/0:26,0:25:51.07:0,51,969	0/1:22,28:44:99:1166,0,194	0/0:29,0:26:21.57:0,22,863	0/0:33,0:31:2.95:0,3,1076	0/0:28,0:23:18.06:0,18,414	0/0:19,0:18:32.94:0,33,717	0/0:18,0:15:36.99:0,37,710	0/0:24,0:23:29.96:0,30,511	0/0:30,0:30:78.17:0,78,1739	1/1:23,0:21:32.99:307,33,0	0/0:20,0:18:38.58:0,39,795	0/0:10,0:7:9.10:0,9,344	0/0:27,0:26:62.40:0,62,855	0/0:30,0:30:23.84:0,24,905	0/0:28,0:26:45.15:0,45,949	0/0:23,0:21:27.05:0,27,576	0/0:17,0:15:29.12:0,29,544	0/0:14,0:11:23.97:0,24,498	0/0:13,0:11:18.06:0,18,479	0/0:39,0:37:61.06:0,61,1444	0/0:24,0:24:60.21:0,60,1377	0/0:13,0:11:27.09:0,27,540
chr10	48101495	.	CAGAG	C	1115.52	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=6.441;DP=718;FS=2.183;HRun=0;HaplotypeScore=124.7879;InbreedingCoeff=0.5246;MQ=58.77;MQ0=27;MQRankSum=-2.272;QD=16.17;ReadPosRankSum=-0.734;VQSLOD=3.0584;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:27:42.39:0,42,820	0/0:9,0:9:21.96:0,22,450	0/0:54,0:13:5.88:0,6,340	0/0:59,0:21:26.26:0,26,194	0/0:19,0:18:36.10:0,36,732	0/0:30,0:29:54.15:0,54,1145	0/0:26,0:26:42.09:0,42,919	0/1:47,0:44:99:633,0,195	0/0:24,0:24:45.67:0,46,885	0/0:32,0:30:60.42:0,60,1168	0/0:25,0:20:18.06:0,18,422	0/0:17,0:16:30.09:0,30,651	0/0:15,0:13:34.36:0,34,718	0/0:22,0:22:26.88:0,27,536	0/0:30,0:31:78.04:0,78,1736	1/1:5,17:20:36.11:588,36,0	0/0:21,0:20:42.14:0,42,919	0/0:10,0:9:21:0,21,389	0/0:27,0:28:62.43:0,62,990	0/0:26,0:26:2.98:0,3,1013	0/0:29,0:27:45.15:0,45,1020	0/0:23,0:21:33.05:0,33,653	0/0:17,0:15:24.08:0,24,548	0/0:12,0:10:24.08:0,24,506	0/0:11,0:9:18.06:0,18,451	0/0:39,0:38:78.25:0,78,1621	0/0:21,0:21:60.21:0,60,1402	0/0:13,0:11:27.09:0,27,607
chr10	48101780	.	A	AGAG	27025.51	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=14.857;DP=678;FS=0.000;HRun=0;HaplotypeScore=125.3556;InbreedingCoeff=0.9901;MQ=83.07;MQ0=0;MQRankSum=-9.005;QD=57.62;ReadPosRankSum=4.888;VQSLOD=6.5470;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,25:27:69.24:1590,69,0	0/0:3,0:3:9.03:0,9,155	0/0:18,0:18:45.12:0,45,711	0/0:29,0:29:77.05:0,77,1338	1/1:2,19:23:57.15:1262,57,0	0/0:30,0:30:90.31:0,90,1588	0/0:28,0:28:81.28:0,81,1409	0/0:46,0:46:99:0,135,2350	1/1:2,27:32:84.29:1921,84,0	1/1:2,25:27:78.27:1763,78,0	1/1:0,15:16:33.11:751,33,0	1/1:2,28:32:84.29:1908,84,0	1/1:2,19:23:57.20:1314,57,0	1/1:2,22:26:63.22:1446,63,0	0/0:28,0:28:81.28:0,81,1429	0/0:27,0:27:81.26:0,81,1371	1/1:1,19:20:51.18:1174,51,0	1/1:2,16:18:45.15:1035,45,0	1/1:4,10:17:51.14:1021,51,0	1/1:2,21:24:57.20:1288,57,0	1/1:1,36:37:89.87:2080,90,0	1/1:2,14:17:45.15:994,45,0	1/1:1,14:15:39.13:901,39,0	1/1:0,22:23:48.16:1104,48,0	1/1:1,14:17:39.13:881,39,0	1/1:0,30:30:90.31:2068,90,0	1/1:4,26:35:81.28:1835,81,0	1/1:0,10:10:30.10:690,30,0
chr10	48102727	.	G	GT	3814.61	PASS	AB=0.604;AC=21;AF=0.375;AN=56;BaseQRankSum=-1.923;DP=672;FS=0.000;HRun=13;HaplotypeScore=83.7102;InbreedingCoeff=0.6492;MQ=75.18;MQ0=1;MQRankSum=-2.448;QD=11.39;ReadPosRankSum=-2.836;VQSLOD=2.6302;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,37:49:95.91:833,96,0	0/0:6,0:8:15.41:0,15,92	0/0:15,0:16:12.79:0,13,104	0/0:16,0:14:4.91:0,5,26	0/0:33,1:36:36.49:0,36,388	0/0:23,3:27:30.69:0,31,347	0/0:16,0:17:43.64:0,44,293	0/1:10,14:24:13.74:302,0,14	1/1:4,12:19:36.47:296,36,0	0/0:23,0:24:44.53:0,45,308	0/0:16,0:18:33.48:0,33,217	0/1:11,14:25:11.12:193,0,11	0/1:7,14:24:14.35:311,0,14	0/1:4,1:17:6.10:47,0,6	0/0:24,0:24:59.40:0,59,410	0/0:21,0:22:46.58:0,47,314	0/0:34,1:37:33.86:0,34,464	0/0:18,0:21:48.68:0,49,320	1/1:5,4:20:39.30:245,39,0	1/1:10,3:33:53.41:328,53,0	1/1:8,2:18:11.53:71,12,0	1/1:8,17:27:37.63:343,38,0	0/1:6,16:22:2.13:268,0,2	1/1:1,13:17:25.20:281,25,0	0/0:27,0:27:41.82:0,42,275	0/0:30,2:32:32.96:0,33,410	1/1:7,3:38:52.41:298,52,0	0/0:9,0:9:17.82:0,18,123
chr10	48105018	.	ACACT	A	1135.57	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.379;DP=625;FS=6.870;HRun=0;HaplotypeScore=110.8760;InbreedingCoeff=0.9843;MQ=83.59;MQ0=0;MQRankSum=-3.943;QD=40.56;ReadPosRankSum=2.562;VQSLOD=4.0715;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,28:28:66.23:1230,66,0	0/0:13,0:13:39.13:0,39,913	0/0:25,0:23:51.72:0,52,1230	0/0:25,0:25:59.75:0,60,1062	0/0:36,0:36:99:0,105,2729	0/0:20,0:20:54.19:0,54,1358	0/0:20,0:20:54.19:0,54,1415	0/0:31,0:31:84.29:0,84,2168	0/0:21,0:21:63.20:0,63,1562	0/0:23,0:23:69.24:0,69,1760	0/0:19,0:19:54.17:0,54,1222	0/0:21,0:21:63.22:0,63,1634	0/0:25,0:25:75.24:0,75,1873	0/0:15,0:15:45.15:0,45,1195	0/0:28,0:28:84.29:0,84,2099	0/0:17,0:17:48.16:0,48,1219	0/0:21,0:21:63.20:0,63,1534	0/0:19,0:19:51.18:0,51,1291	0/0:21,0:21:54.18:0,54,1323	0/0:29,0:29:72.25:0,72,1892	0/0:14,0:14:39.13:0,39,1001	0/0:18,0:18:51.18:0,51,1354	0/0:25,0:25:75.24:0,75,1850	0/0:19,0:19:57.18:0,57,1392	0/0:30,0:30:87.28:0,87,2109	0/0:25,0:25:75.25:0,75,1900	0/0:30,0:30:87.30:0,87,2201	0/0:7,0:7:15.05:0,15,273
chr10	48105031	.	AT	A	514.83	PASS	AC=2;AF=0.037;AN=54;BaseQRankSum=2.990;DP=595;FS=5.010;HRun=9;HaplotypeScore=75.5706;InbreedingCoeff=0.9947;MQ=81.55;MQ0=0;MQRankSum=0.369;QD=18.39;ReadPosRankSum=-4.091;VQSLOD=2.6170;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:69.21:0,69,796	0/0:13,0:13:36.11:0,36,415	0/0:21,0:18:23.72:0,24,247	0/0:22,0:20:23.76:0,24,216	0/0:38,0:38:99:0,104,1176	0/0:20,1:21:35.71:0,36,657	0/0:17,0:18:44.18:0,44,538	1/1:4,24:28:68.95:609,69,0	0/0:19,0:19:34.94:0,35,593	0/0:24,0:24:66.12:0,66,737	0/0:16,0:16:45.12:0,45,509	0/0:21,0:21:51.14:0,51,580	0/0:23,0:23:51.14:0,51,578	0/0:15,0:15:42.12:0,42,485	0/0:32,0:32:90.27:0,90,1039	0/0:15,0:15:36.09:0,36,405	0/0:20,0:20:60.15:0,60,680	0/0:15,0:15:33.06:0,33,366	0/0:19,0:19:48.10:0,48,530	0/0:24,0:24:63.11:0,63,689	0/0:14,0:14:38.92:0,39,415	0/0:17,0:17:51.14:0,51,578	0/0:24,0:24:63.17:0,63,717	0/0:19,0:19:51.14:0,51,579	0/0:27,0:27:81.23:0,81,927	0/0:26,0:26:66.18:0,66,745	0/0:33,0:33:93.19:0,93,1011	./.
chr10	48108869	.	C	CA	2918.62	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=-6.858;DP=493;FS=8.822;HRun=8;HaplotypeScore=48.8526;InbreedingCoeff=0.8892;MQ=62.48;MQ0=3;MQRankSum=-0.667;QD=20.85;ReadPosRankSum=-1.172;VQSLOD=2.8814;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,30:34:78.23:900,78,0	0/0:9,0:9:24.01:0,24,220	0/1:6,0:5:11.11:11,0,69	0/0:6,0:5:14.98:0,15,127	0/0:21,0:21:57.02:0,57,517	0/0:22,0:22:63.02:0,63,570	0/0:16,0:16:38.96:0,39,347	1/1:6,2:25:51.49:289,51,0	0/0:11,0:11:29.98:0,30,264	0/0:22,0:21:48.02:0,48,437	0/0:23,0:23:63.01:0,63,572	0/0:12,0:12:36.02:0,36,329	0/0:19,0:19:41.97:0,42,373	0/0:9,0:9:27:0,27,242	0/0:14,0:14:42.01:0,42,380	0/0:12,0:12:29.99:0,30,265	0/0:26,0:26:72.04:0,72,659	0/0:25,0:24:54.02:0,54,494	1/1:4,8:11:24.04:260,24,0	1/1:4,18:23:57:635,57,0	1/1:1,23:24:57.17:658,57,0	0/0:10,0:10:27:0,27,244	0/0:32,0:32:78.02:0,78,713	0/0:21,0:21:59.98:0,60,541	0/0:16,0:16:33:0,33,302	0/0:17,0:17:45.02:0,45,409	1/1:2,14:15:8.62:353,9,0	0/0:10,0:10:27.01:0,27,247
chr10	48110170	.	CTTTTTTTTT	C	7484.03	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=4.073;DP=459;FS=14.272;HRun=18;HaplotypeScore=146.4122;InbreedingCoeff=0.8980;MQ=53.32;MQ0=3;MQRankSum=-4.098;QD=31.05;ReadPosRankSum=7.091;VQSLOD=-0.0590;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:22:37.94:0,38,806	0/0:6,0:6:15.05:0,15,608	1/1:15,0:7:2.54:17,3,0	0/0:9,0:4:0.89:0,1,2	1/1:5,20:25:32.66:605,33,0	0/0:17,0:18:45.15:0,45,1620	0/0:10,0:10:30.10:0,30,933	0/0:24,0:39:86.07:0,86,1741	0/0:12,0:12:27.09:0,27,805	1/1:2,17:19:49.90:960,50,0	1/1:7,14:20:29.56:580,30,0	1/1:5,14:20:23.83:539,24,0	1/1:2,9:12:24.01:491,24,0	1/1:5,11:16:17.92:381,18,0	0/0:18,0:18:39.12:0,39,1072	0/0:18,0:18:39.13:0,39,1055	1/1:2,8:10:14.89:363,15,0	1/1:4,0:4:5.79:62,6,0	0/0:14,0:14:33.11:0,33,723	0/0:14,0:19:45.15:0,45,879	0/0:8,0:8:12.04:0,12,214	1/1:3,12:14:26.99:534,27,0	1/1:2,13:16:27.39:556,27,0	1/1:4,6:9:17.99:397,18,0	1/1:0,16:16:30.10:659,30,0	1/1:4,23:27:65.86:1268,66,0	0/0:18,0:21:48.16:0,48,940	1/1:3,12:15:2.62:72,3,0
chr10	48110173	.	T	TC	507.40	PASS	AB=0.880;AC=3;AF=0.054;AN=56;BaseQRankSum=-3.891;DP=459;FS=0.000;HRun=0;HaplotypeScore=119.6009;InbreedingCoeff=0.5202;MQ=50.82;MQ0=3;MQRankSum=-0.181;QD=7.93;ReadPosRankSum=-4.442;VQSLOD=2.6176;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,1:22:39.64:0,40,300	0/0:6,0:6:17.90:0,18,179	0/0:14,0:6:11.10:0,11,93	0/0:9,0:4:5.98:0,6,46	0/0:25,0:25:29.49:0,29,245	0/0:17,0:17:47.38:0,47,494	0/0:11,0:11:26.89:0,27,277	1/1:41,1:40:90.65:598,91,0	0/0:12,0:12:35:0,35,324	0/0:19,0:19:50.55:0,51,395	0/0:20,0:19:44.50:0,45,327	0/0:20,0:20:28.42:0,28,261	0/0:12,0:12:26.42:0,26,180	0/0:14,0:14:16.20:0,16,147	0/0:17,0:17:42.82:0,43,359	0/0:17,0:16:30.56:0,31,230	0/0:9,0:9:17.97:0,18,148	0/0:10,0:10:23.09:0,23,153	0/0:17,0:17:29.16:0,29,291	0/0:21,1:22:9.86:0,10,255	0/0:7,0:7:8.96:0,9,69	0/0:15,0:14:24.59:0,25,229	0/0:15,0:15:23.25:0,23,211	0/0:10,0:9:20.89:0,21,161	0/0:16,0:16:21.41:0,21,197	0/0:25,0:25:67.79:0,68,532	0/1:19,3:21:12.20:12,0,285	0/0:14,0:14:8.99:0,9,77
chr10	48110179	.	T	TGG	727.24	PASS	AB=0.958;AC=13;AF=0.232;AN=56;BaseQRankSum=-2.212;DP=425;FS=0.000;HRun=0;HaplotypeScore=117.9058;InbreedingCoeff=-0.1606;MQ=44.94;MQ0=3;MQRankSum=3.615;QD=3.97;ReadPosRankSum=-0.620;VQSLOD=2.4826;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:49.01:0,49,589	0/0:6,0:6:18.06:0,18,279	1/1:10,0:2:2.66:11,3,0	0/0:6,0:3:2.22:0,2,7	0/1:23,0:23:71.02:109,0,71	0/0:16,0:16:48.12:0,48,678	0/0:12,0:12:33.03:0,33,453	0/0:39,0:37:99:0,103,1149	0/0:9,0:9:27.09:0,27,392	0/1:18,0:18:78.08:78,0,113	0/1:15,1:15:44.63:131,0,45	0/0:17,0:17:22.28:0,22,114	0/1:10,1:11:17.44:84,0,17	0/1:14,1:15:24.30:24,0,56	0/0:16,0:16:42.11:0,42,573	0/0:16,0:15:38.76:0,39,425	0/0:8,0:8:13.87:0,14,62	0/1:9,0:9:56.23:56,0,65	0/0:16,0:16:48.15:0,48,655	0/0:23,0:23:63.19:0,63,802	0/0:7,0:7:18.03:0,18,209	0/1:12,1:12:62.71:101,0,63	0/1:17,0:17:10.50:10,0,94	0/1:7,2:8:18.47:18,0,41	0/1:18,0:18:53.25:53,0,84	0/1:24,0:24:99:199,0,125	0/0:19,0:18:51.12:0,51,593	0/0:12,0:12:2.37:0,2,8
chr10	48110420	.	GAAAA	G	2359.87	PASS	AB=0.605;AC=11;AF=0.196;AN=56;BaseQRankSum=6.940;DP=491;FS=2.141;HRun=15;HaplotypeScore=85.1715;InbreedingCoeff=0.8471;MQ=72.71;MQ0=0;MQRankSum=0.424;QD=18.29;ReadPosRankSum=5.220;VQSLOD=1.8782;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:9,1:25:34.39:50,0,34	0/0:4,0:5:15.05:0,15,268	0/0:13,0:9:7.97:0,8,46	0/0:17,0:15:8.22:0,8,109	0/0:25,0:28:72.17:0,72,1088	0/0:18,0:20:45.14:0,45,883	0/0:6,0:8:21.07:0,21,417	1/1:5,14:20:41.96:554,42,0	0/0:21,0:23:60.12:0,60,1023	0/0:19,0:20:39.11:0,39,676	0/0:24,0:24:60.18:0,60,1131	0/0:18,0:21:51.15:0,51,936	0/0:13,0:13:33.10:0,33,656	0/0:11,0:11:23.66:0,24,380	0/0:14,0:16:30.09:0,30,579	0/0:5,0:13:15.04:0,15,262	0/0:19,0:24:58.09:0,58,1079	0/0:18,0:19:39.01:0,39,671	1/1:3,8:13:28.15:302,28,0	1/1:5,23:28:47.96:709,48,0	1/1:6,16:22:20.96:473,21,0	0/0:13,0:13:30.10:0,30,618	0/0:18,0:19:31.15:0,31,683	0/0:8,0:8:15.05:0,15,345	0/0:11,0:14:33.09:0,33,560	0/0:12,0:17:36.10:0,36,666	1/1:3,16:19:36.10:449,36,0	0/0:13,0:13:36.04:0,36,624
chr10	48111106	.	A	ATTTCT	2492.62	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=9.174;DP=559;FS=2.157;HRun=0;HaplotypeScore=113.5172;InbreedingCoeff=0.9638;MQ=85.54;MQ0=0;MQRankSum=-9.489;QD=67.37;ReadPosRankSum=2.699;VQSLOD=5.0903;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,120,2658	0/0:8,0:8:24.08:0,24,559	0/0:21,0:21:57.20:0,57,1253	0/0:30,0:30:81.21:0,81,1731	0/0:36,0:36:99:0,108,2446	0/0:20,0:20:60.19:0,60,1332	0/0:19,0:19:57.20:0,57,1313	0/0:39,0:39:99:0,111,2430	0/0:19,0:19:57.18:0,57,1263	0/0:24,0:24:69.23:0,69,1550	0/0:18,0:18:54.16:0,54,1210	0/0:12,0:12:33.11:0,33,769	0/0:15,0:15:42.13:0,42,913	0/0:21,0:21:63.22:0,63,1468	0/0:15,0:15:45.15:0,45,1049	0/0:21,0:21:60.21:0,60,1398	0/0:23,0:23:66.21:0,66,1492	0/0:18,0:18:54.19:0,54,1235	1/1:1,4:5:15.05:433,15,0	1/1:1,12:13:39.13:926,39,0	1/1:1,2:3:6.02:116,6,0	0/0:31,0:31:93.28:0,93,2011	0/0:24,0:24:72.25:0,72,1675	0/0:20,0:20:60.21:0,60,1395	0/0:18,0:18:54.19:0,54,1258	0/0:23,0:23:69.24:0,69,1608	1/1:0,16:16:48.16:1170,48,0	0/0:7,0:7:21.07:0,21,489
chr10	48111107	.	GAAAGCC	G	1360.38	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=10.114;DP=558;FS=1.358;HRun=0;HaplotypeScore=128.4277;InbreedingCoeff=0.9595;MQ=84.94;MQ0=0;MQRankSum=-8.810;QD=36.77;ReadPosRankSum=2.984;VQSLOD=3.7175;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,117,4241	0/0:9,0:9:27.09:0,27,988	0/0:21,0:21:63.14:0,63,2078	0/0:29,0:29:72.92:0,73,2731	0/0:36,0:36:99:0,108,3969	0/0:20,0:20:60.19:0,60,2136	0/0:19,0:19:57.14:0,57,1932	0/0:37,0:37:99:0,108,4016	0/0:20,0:20:60.21:0,60,2230	0/0:24,0:24:72.24:0,72,2537	0/0:17,0:17:51.18:0,51,1887	0/0:13,0:13:39.13:0,39,1434	0/0:16,0:16:48.16:0,48,1710	0/0:21,0:21:63.22:0,63,2369	0/0:15,0:15:45.15:0,45,1694	0/0:21,0:21:63.22:0,63,2285	0/0:24,0:24:69.24:0,69,2567	0/0:18,0:18:54.19:0,54,2011	1/1:1,4:5:12.04:223,12,0	1/1:1,12:13:37.90:494,38,0	1/1:1,2:3:5.98:63,6,0	0/0:30,0:30:90.30:0,90,3298	0/0:24,0:24:72.25:0,72,2706	0/0:20,0:20:60.19:0,60,2157	0/0:18,0:18:54.19:0,54,2033	0/0:23,0:23:69.24:0,69,2598	1/1:0,16:16:48.16:731,48,0	0/0:7,0:7:21.07:0,21,790
chr10	48111254	.	TA	T	696.10	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.529;DP=628;FS=2.251;HRun=9;HaplotypeScore=61.3592;InbreedingCoeff=0.9924;MQ=78.55;MQ0=0;MQRankSum=0.383;QD=21.75;ReadPosRankSum=-4.351;VQSLOD=2.4990;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:87.20:0,87,977	0/0:12,0:12:36.11:0,36,415	0/0:23,0:22:37.23:0,37,486	0/0:18,0:18:50.36:0,50,524	0/0:36,0:37:99:0,105,1161	0/0:22,0:22:66.15:0,66,738	0/0:28,0:28:60.14:0,60,664	1/1:2,30:32:89.93:791,90,0	0/0:11,0:11:27.08:0,27,311	0/0:32,0:32:81.22:0,81,919	0/0:23,1:24:35.69:0,36,635	0/0:18,0:18:48.13:0,48,546	0/0:17,0:17:45.08:0,45,504	0/0:16,0:16:39.12:0,39,450	0/0:17,1:18:20.69:0,21,492	0/0:19,0:19:54.16:0,54,623	0/0:27,0:26:78.17:0,78,873	0/0:11,0:11:30.09:0,30,346	0/0:26,0:26:32.96:0,33,573	0/0:39,0:39:99:0,102,1176	0/0:19,0:19:51.14:0,51,578	0/0:20,0:20:57.17:0,57,658	0/0:20,0:21:53.98:0,54,594	0/0:18,0:18:45.12:0,45,508	0/0:22,0:22:63.17:0,63,715	0/0:27,0:27:75.20:0,75,849	0/0:29,0:29:84.23:0,84,955	0/0:9,0:9:27.05:0,27,299
chr10	48111780	.	CAT	C	8856.07	PASS	AB=0.833;AC=41;AF=0.732;AN=56;BaseQRankSum=7.807;DP=418;FS=1.722;HRun=0;HaplotypeScore=58.7302;InbreedingCoeff=0.8146;MQ=73.22;MQ0=0;MQRankSum=-0.820;QD=27.94;ReadPosRankSum=2.972;VQSLOD=5.8383;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,23:29:63.20:802,63,0	0/0:4,0:4:12.04:0,12,201	0/0:9,0:4:9.03:0,9,133	0/0:22,0:13:5.09:0,5,61	1/1:4,17:21:45.14:573,45,0	0/0:16,0:16:48.16:0,48,803	0/0:8,0:8:15.05:0,15,245	0/0:32,0:32:72.25:0,72,1195	0/0:10,0:10:24.08:0,24,402	1/1:4,12:16:36.12:458,36,0	1/1:1,17:18:45.14:572,45,0	1/1:1,5:6:15.05:191,15,0	1/1:3,14:17:39.12:497,39,0	1/1:1,10:11:24.08:306,24,0	0/1:4,1:5:26.15:26,0,139	1/1:1,8:9:24.08:306,24,0	1/1:1,27:28:69.22:878,69,0	1/1:3,8:11:24.08:306,24,0	1/1:8,16:24:48.15:611,48,0	1/1:4,17:21:47.94:568,48,0	1/1:4,4:8:12.04:153,12,0	1/1:2,2:4:3.01:38,3,0	1/1:2,7:9:21.07:267,21,0	1/1:2,5:7:12.04:153,12,0	1/1:1,22:23:51.16:649,51,0	1/1:4,19:23:35.42:701,35,0	1/1:2,21:23:54.17:687,54,0	1/1:0,4:4:9.03:114,9,0
chr10	48112304	.	ATTGTG	A	906.38	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=1.197;DP=432;FS=3.304;HRun=0;HaplotypeScore=91.1528;InbreedingCoeff=0.8915;MQ=77.34;MQ0=0;MQRankSum=-5.181;QD=47.70;ReadPosRankSum=-2.476;VQSLOD=3.2707;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:48.16:0,48,1455	0/0:7,0:7:18.06:0,18,531	0/0:13,0:13:35.78:0,36,786	0/0:11,0:10:26.12:0,26,620	0/0:28,0:28:72.25:0,72,2156	0/0:24,0:24:72.23:0,72,2006	0/0:11,0:11:27.09:0,27,818	1/1:2,17:19:51.17:1001,51,0	0/0:10,0:10:30.10:0,30,908	0/0:14,0:14:30.10:0,30,898	0/0:17,0:17:48.16:0,48,1308	0/0:13,0:13:36.12:0,36,1090	0/0:15,0:15:42.14:0,42,1173	0/0:13,0:13:39.13:0,39,1138	0/0:17,0:17:48.16:0,48,1381	0/0:15,0:15:39.13:0,39,1114	0/0:25,0:25:75.26:0,75,2185	0/0:18,0:18:48.15:0,48,1367	0/0:17,0:17:42.14:0,42,1115	0/0:26,0:26:63.22:0,63,1884	0/0:3,0:3:6.02:0,6,182	0/0:9,0:9:27.09:0,27,818	0/0:14,0:14:42.14:0,42,1273	0/0:8,0:8:24.06:0,24,659	0/0:19,0:19:54.19:0,54,1635	0/0:19,0:19:57.20:0,57,1685	0/0:20,0:20:54.17:0,54,1526	0/0:9,0:9:24.08:0,24,727
chr10	48112718	.	A	AGT	565.32	PASS	AB=1.000;AC=27;AF=0.794;AN=34;BaseQRankSum=-1.394;DP=319;FS=5.686;HRun=0;HaplotypeScore=62.4517;InbreedingCoeff=0.3431;MQ=59.24;MQ0=21;MQRankSum=1.247;QD=3.41;ReadPosRankSum=-0.709;VQSLOD=1.3404;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:17,6:21:5.73:34,6,0	0/0:3,0:2:3.01:0,3,32	./.	./.	./.	./.	1/1:11,0:9:4.21:23,4,0	./.	./.	1/1:8,0:8:3.84:13,4,0	./.	1/1:11,0:10:6:63,6,0	1/1:15,0:12:17.97:157,18,0	1/1:12,0:11:8.66:50,9,0	0/1:8,0:8:0:0,0,0	0/0:4,0:5:2.84:0,3,14	1/1:10,0:8:5.27:34,5,0	1/1:12,0:10:8.80:98,9,0	1/1:15,0:14:3.22:13,3,0	./.	./.	./.	./.	1/1:19,0:18:8.02:54,8,0	0/0:4,0:4:0.07:0,0,1	1/1:11,0:10:11:77,11,0	1/1:6,0:6:0.92:22,1,0	1/1:4,0:4:2.98:21,3,0
chr10	48113051	.	TA	T	1199.21	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=3.729;DP=400;FS=2.632;HRun=10;HaplotypeScore=57.2703;InbreedingCoeff=0.8105;MQ=67.48;MQ0=4;MQRankSum=-0.701;QD=16.89;ReadPosRankSum=2.133;VQSLOD=4.2023;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,11:16:32.98:286,33,0	0/0:2,0:2:6.02:0,6,66	0/0:24,1:6:6.01:0,6,59	0/0:18,2:11:5.54:0,6,104	0/0:16,0:16:27.06:0,27,290	0/0:22,0:22:48.02:0,48,507	0/0:13,0:14:36.07:0,36,380	0/0:5,0:33:91.44:0,91,483	0/0:9,0:9:24.06:0,24,266	0/0:25,0:25:54.13:0,54,585	0/0:11,0:11:30.07:0,30,323	0/0:6,0:6:18.04:0,18,193	0/0:11,0:10:24.06:0,24,265	0/0:13,0:13:23.98:0,24,233	0/0:14,0:14:33.07:0,33,356	0/0:13,0:13:30.02:0,30,316	0/0:14,0:13:27.04:0,27,280	0/0:19,0:19:39.09:0,39,422	1/1:3,13:16:38.98:338,39,0	1/1:4,9:13:20.93:176,21,0	1/1:0,2:2:6:52,6,0	0/0:2,0:2:3.01:0,3,33	0/0:5,0:5:6.02:0,6,66	0/0:8,0:8:0:0,0,0	0/0:14,0:14:36.07:0,36,374	0/0:26,0:25:47.33:0,47,523	1/1:5,18:23:59.94:512,60,0	0/0:5,0:5:12.03:0,12,133
chr10	48113712	.	GAAA	G	3615.06	PASS	AB=0.642;AC=39;AF=0.696;AN=56;BaseQRankSum=1.894;DP=386;FS=0.000;HRun=16;HaplotypeScore=67.2279;InbreedingCoeff=0.7246;MQ=54.75;MQ0=3;MQRankSum=0.966;QD=12.60;ReadPosRankSum=5.218;VQSLOD=0.5932;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:15,3:34:60.87:61,0,79	0/0:10,0:11:27.01:0,27,348	0/0:5,0:2:3.01:0,3,31	0/0:5,0:3:6.49:0,6,97	1/1:4,6:12:16.57:176,17,0	0/0:11,0:13:26.50:0,27,349	0/0:19,0:19:20.98:0,21,261	0/0:16,0:19:50.95:0,51,671	0/0:11,1:13:3.83:0,4,451	1/1:7,12:21:9.71:242,10,0	1/1:3,1:4:8.80:76,9,0	1/1:6,5:11:1.89:145,2,0	1/1:8,3:11:16.87:152,17,0	1/1:5,5:11:17.80:179,18,0	0/0:12,0:13:27.01:0,27,343	1/1:2,7:11:13.42:144,13,0	1/1:8,15:25:38.70:415,39,0	1/1:3,11:12:23.74:258,24,0	1/1:4,6:12:19.16:179,19,0	1/1:4,9:13:23.82:258,24,0	1/1:5,13:19:16.74:219,17,0	1/1:4,2:6:2.82:32,3,0	1/1:3,4:7:5.92:65,6,0	1/1:4,13:18:35.88:358,36,0	1/1:6,6:13:7.32:94,7,0	1/1:2,6:9:16.44:181,16,0	1/1:5,10:22:19.91:191,20,0	1/1:3,6:10:16.12:191,16,0
chr10	48114457	.	AT	A	1857.09	PASS	AB=0.815;AC=39;AF=0.722;AN=54;BaseQRankSum=4.003;DP=286;FS=8.250;HRun=14;HaplotypeScore=44.7323;InbreedingCoeff=0.6161;MQ=64.74;MQ0=1;MQRankSum=1.939;QD=9.29;ReadPosRankSum=2.527;VQSLOD=2.3161;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,1:33:42.89:0,43,520	./.	0/0:14,0:4:0:0,0,0	0/1:11,0:5:0:0,0,0	1/1:3,3:5:5.90:41,6,0	0/1:5,5:10:10.01:85,0,10	1/1:5,3:8:8.91:62,9,0	1/1:15,0:27:22.09:64,22,0	1/1:0,1:1:2.98:21,3,0	1/1:1,2:3:8.90:61,9,0	1/1:2,3:5:5.88:41,6,0	0/1:5,2:7:9.38:30,0,9	1/1:1,4:6:13.94:88,14,0	1/1:1,4:5:11.90:82,12,0	1/1:4,6:9:17.84:123,18,0	1/1:1,0:12:16.28:47,16,0	1/1:6,25:31:51.27:417,51,0	1/1:5,12:17:27.77:236,28,0	0/0:15,0:15:18.56:0,19,83	0/0:8,0:8:14.53:0,15,86	0/0:6,0:6:14.49:0,14,81	1/1:1,2:3:5.94:41,6,0	1/1:0,3:3:5.95:41,6,0	1/1:1,6:7:17.85:123,18,0	1/1:3,3:5:8.76:59,9,0	1/1:0,8:8:23.73:160,24,0	0/0:9,0:9:22.71:0,23,112	1/1:2,10:12:29.68:205,30,0
chr10	48114545	.	AATT	A	152.53	PASS	AB=1.000;AC=12;AF=0.375;AN=32;BaseQRankSum=0.679;DP=176;FS=0.000;HRun=0;HaplotypeScore=34.6960;InbreedingCoeff=0.2966;MQ=52.97;MQ0=2;MQRankSum=-0.815;QD=2.77;ReadPosRankSum=0.543;VQSLOD=1.1860;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:9,0:9:9:80,9,0	./.	./.	./.	./.	0/1:8,0:8:29.78:30,0,75	./.	0/0:32,0:30:3.48:0,3,40	./.	./.	./.	1/1:3,1:4:3.01:39,3,0	1/1:1,0:1:3.01:35,3,0	0/0:1,0:1:3.01:0,3,40	0/0:2,0:2:2.97:0,3,20	0/0:5,0:5:3.01:0,3,49	0/1:24,0:24:1.14:1,0,206	0/0:7,0:7:6.02:0,6,93	./.	./.	./.	./.	0/0:2,0:2:0:0,0,0	1/1:0,3:3:3.01:39,3,0	0/0:10,0:8:6.02:0,6,91	0/0:8,0:8:6.02:0,6,95	1/1:6,0:6:3.01:39,3,0	0/0:12,0:12:6.02:0,6,91
chr10	48114590	.	TATTATGGTGGTG	T	1064.42	PASS	AB=0.956;AC=17;AF=0.405;AN=42;BaseQRankSum=0.177;DP=107;FS=7.461;HRun=0;HaplotypeScore=32.2886;InbreedingCoeff=0.0131;MQ=41.16;MQ0=26;MQRankSum=-0.887;QD=14.19;ReadPosRankSum=-0.069;VQSLOD=-0.3052;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:5,0:4:78.31:121,0,78	./.	./.	./.	./.	0/1:4,0:4:5.93:6,0,235	0/0:1,0:1:3.01:0,3,75	0/1:21,0:10:31.64:32,0,165	0/0:2,0:1:3.01:0,3,122	0/0:3,0:1:3:0,3,28	1/1:2,0:2:6.02:173,6,0	1/1:3,0:3:9.03:224,9,0	1/1:0,0:1:3.01:53,3,0	0/0:1,0:1:3.01:0,3,52	0/0:2,0:2:6.02:0,6,159	0/1:2,0:2:4.40:4,0,64	0/1:10,8:17:91.58:92,0,354	0/1:8,0:7:83.13:83,0,132	0/0:2,0:1:2.98:0,3,22	./.	0/0:2,0:1:2.88:0,3,15	./.	./.	1/1:6,0:6:12.04:308,12,0	0/0:4,0:2:6.02:0,6,139	0/1:4,0:4:87.04:87,0,117	1/1:1,0:1:2.88:15,3,0	0/0:3,0:3:6.02:0,6,123
chr10	48114593	.	TATGGTGGTGGTG	T	589.81	PASS	AB=0.964;AC=17;AF=0.425;AN=40;BaseQRankSum=1.370;DP=105;FS=7.686;HRun=0;HaplotypeScore=34.5173;InbreedingCoeff=0.0124;MQ=40.02;MQ0=26;MQRankSum=-0.850;QD=8.43;ReadPosRankSum=0.191;VQSLOD=-0.3309;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:5,0:4:52.89:53,0,115	./.	./.	./.	./.	0/1:4,0:4:4.03:4,0,190	0/0:1,0:1:3.01:0,3,64	0/1:12,6:7:23.99:116,0,24	0/0:2,0:1:3.01:0,3,162	./.	1/1:2,0:2:6.02:73,6,0	1/1:3,0:3:9.01:113,9,0	1/1:1,0:1:2.92:17,3,0	0/0:1,0:1:2.80:0,3,13	0/0:2,0:2:5.95:0,6,180	0/1:2,0:2:4.42:4,0,19	0/1:17,0:16:82.63:83,0,108	0/1:7,0:6:43.55:44,0,60	0/0:2,0:1:2.98:0,3,22	./.	0/0:3,0:2:2.88:0,3,15	./.	./.	1/1:6,0:6:12.02:153,12,0	0/0:4,0:2:5.99:0,6,50	0/1:4,0:4:47.18:47,0,90	1/1:1,0:1:2.80:13,3,0	0/0:3,0:3:5.94:0,6,41
chr10	48114598	.	TGGTG	T	236.01	PASS	AB=0.782;AC=7;AF=0.175;AN=40;BaseQRankSum=1.988;DP=106;FS=1.303;HRun=0;HaplotypeScore=22.1237;InbreedingCoeff=-0.1036;MQ=38.51;MQ0=25;MQRankSum=-1.369;QD=6.74;ReadPosRankSum=3.107;VQSLOD=0.9466;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:3:8.77:0,9,135	0/0:2,0:2:6.02:0,6,121	./.	./.	./.	0/0:5,0:5:11.25:0,11,201	0/0:2,0:2:6.02:0,6,109	0/0:16,0:5:5.88:0,6,45	0/0:2,0:1:3.01:0,3,84	./.	1/1:2,0:2:6.02:75,6,0	0/1:1,2:3:15.99:55,0,16	0/0:1,0:1:3.01:0,3,34	0/0:1,0:1:2.50:0,2,9	0/0:2,0:2:6.02:0,6,124	0/0:2,0:2:6:0,6,60	0/1:14,1:14:47.14:47,0,71	0/1:5,1:5:25.49:58,0,25	0/0:2,0:2:3.01:0,3,76	./.	0/0:4,0:3:3.48:0,3,42	./.	./.	0/1:3,2:5:12.75:87,0,13	./.	0/1:3,1:4:24.68:25,0,36	0/0:1,0:1:3.01:0,3,41	0/0:3,0:3:5.78:0,6,32
chr10	48114897	.	GCTTTC	G	2613.71	PASS	AC=34;AF=0.680;AN=50;BaseQRankSum=-2.095;DP=258;FS=1.900;HRun=0;HaplotypeScore=58.0427;InbreedingCoeff=0.8678;MQ=84.60;MQ0=4;MQRankSum=-7.176;QD=16.34;ReadPosRankSum=2.075;VQSLOD=2.9737;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:26:68.06:466,68,0	0/0:3,0:3:9.01:0,9,155	0/0:25,0:13:1.24:0,1,349	0/0:23,0:18:26.29:0,26,316	1/1:2,0:2:5.92:41,6,0	0/0:13,0:13:36.11:0,36,722	0/0:9,0:9:20.99:0,21,327	0/0:13,0:11:15.94:0,16,285	0/0:7,0:7:21:0,21,379	1/1:4,0:4:11.84:78,12,0	./.	1/1:11,0:11:29.69:201,30,0	1/1:6,0:6:17.79:119,18,0	1/1:8,0:8:23.70:164,24,0	0/0:5,0:5:14.73:0,15,186	1/1:9,0:9:26.70:179,27,0	1/1:14,0:14:38.60:281,39,0	1/1:13,0:13:13.28:186,13,0	1/1:3,9:10:29.81:219,30,0	1/1:3,0:3:8.88:61,9,0	1/1:8,0:8:23.81:174,24,0	1/1:2,0:1:2.92:17,3,0	./.	1/1:21,0:21:29.33:197,29,0	1/1:6,0:5:14.71:90,15,0	1/1:7,0:7:20.83:149,21,0	1/1:8,0:8:23.85:179,24,0	./.
chr10	48115104	.	C	CA	1833.01	PASS	AB=0.558;AC=33;AF=0.635;AN=52;BaseQRankSum=8.138;DP=310;FS=1.951;HRun=0;HaplotypeScore=48.7246;InbreedingCoeff=0.6920;MQ=68.44;MQ0=5;MQRankSum=-9.497;QD=12.39;ReadPosRankSum=1.665;VQSLOD=4.2032;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:5,19:23:49.10:330,0,49	0/0:5,0:5:12.04:0,12,168	0/0:22,0:19:57.17:0,57,756	0/0:12,0:11:32.12:0,32,407	./.	0/0:16,0:16:36.12:0,36,496	0/0:23,0:23:57.19:0,57,793	0/0:31,0:29:84.28:0,84,1167	0/0:11,0:11:24.08:0,24,332	1/1:0,4:4:12.04:183,12,0	./.	1/1:0,3:3:5.90:37,6,0	1/1:0,8:8:12.04:162,12,0	1/1:0,6:6:5.88:36,6,0	0/0:25,0:25:69.23:0,69,962	1/1:0,7:7:8.83:54,9,0	1/1:2,17:20:17.99:206,18,0	1/1:1,12:13:29.90:355,30,0	1/1:0,2:2:6.02:95,6,0	1/1:0,9:9:2.94:18,3,0	0/0:0,3:3:0:0,0,0	1/1:0,7:7:5.88:36,6,0	1/1:0,9:9:9.26:53,9,0	1/1:0,14:14:7.26:79,7,0	1/1:0,5:5:5.88:36,6,0	1/1:2,6:6:18.04:261,18,0	1/1:0,8:8:5.91:38,6,0	1/1:0,1:1:3.01:41,3,0
chr10	48115933	.	CGA	C	17531.19	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=13.303;DP=652;FS=1.146;HRun=0;HaplotypeScore=86.1040;InbreedingCoeff=0.9929;MQ=77.91;MQ0=0;MQRankSum=-0.312;QD=35.78;ReadPosRankSum=3.898;VQSLOD=6.8036;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,42:44:99:1524,111,0	0/0:12,0:12:30.10:0,30,532	0/0:17,0:17:38.92:0,39,621	0/0:16,0:16:10.65:0,11,468	1/1:0,20:20:57.19:783,57,0	0/0:23,0:23:69.24:0,69,1220	0/0:25,0:25:66.23:0,66,1166	0/0:28,0:28:81.27:0,81,1411	0/0:18,0:18:39.13:0,39,691	1/1:1,26:27:75.24:1015,75,0	1/1:1,17:18:48.16:653,48,0	1/1:2,35:37:99:1359,99,0	1/1:5,14:18:42.14:576,42,0	1/1:1,23:24:63.21:865,63,0	0/0:23,0:23:69.24:0,69,1224	1/1:0,24:24:66.22:907,66,0	1/1:4,44:48:99:1769,129,0	1/1:1,21:22:60.20:824,60,0	1/1:7,15:22:45.15:615,45,0	1/1:2,17:19:51.17:700,51,0	1/1:1,30:31:84.28:1141,84,0	1/1:2,13:15:39.13:536,39,0	1/1:1,17:18:45.15:618,45,0	1/1:3,23:26:63.21:860,63,0	1/1:0,14:14:42.14:577,42,0	1/1:4,26:30:78.24:1054,78,0	1/1:1,18:19:48.16:659,48,0	1/1:0,13:13:36.12:494,36,0
chr10	48116020	.	A	ACT	4695.74	PASS	AB=1.000;AC=42;AF=0.750;AN=56;BaseQRankSum=7.851;DP=617;FS=4.607;HRun=0;HaplotypeScore=165.1038;InbreedingCoeff=0.7218;MQ=62.52;MQ0=12;MQRankSum=-4.330;QD=9.52;ReadPosRankSum=-3.871;VQSLOD=3.7027;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:31,14:44:6.55:899,7,0	0/0:7,0:8:14.86:0,15,143	1/1:27,1:16:3.48:48,3,0	0/0:39,0:19:4.54:0,5,37	0/1:9,0:9:11.57:62,0,12	0/0:19,0:19:39.04:0,39,420	0/0:29,0:32:65.77:0,66,672	1/1:26,0:24:21.34:180,21,0	0/0:15,0:15:18.05:0,18,206	1/1:20,0:20:33.03:296,33,0	1/1:17,0:17:14.82:145,15,0	1/1:25,0:24:11.95:104,12,0	1/1:19,0:18:20.23:177,20,0	1/1:29,0:29:36.99:374,37,0	0/0:11,0:10:12.03:0,12,137	1/1:15,0:15:9.01:84,9,0	1/1:34,0:34:23.07:423,23,0	1/1:25,0:25:24.02:247,24,0	1/1:24,0:22:26.89:252,27,0	1/1:20,0:20:9.38:65,9,0	1/1:22,0:22:6.01:69,6,0	0/1:12,0:10:0.14:0,0,0	1/1:23,0:22:11.95:100,12,0	1/1:18,0:15:3.47:26,3,0	1/1:21,0:21:30.26:264,30,0	1/1:28,0:27:48.02:509,48,0	1/1:17,0:21:23.11:176,23,0	1/1:11,0:11:22.23:194,22,0
chr10	48116048	.	T	TC	869.15	PASS	AB=0.880;AC=14;AF=0.250;AN=56;BaseQRankSum=9.175;DP=598;FS=7.253;HRun=1;HaplotypeScore=122.5091;InbreedingCoeff=-0.3324;MQ=60.21;MQ0=14;MQRankSum=1.684;QD=2.93;ReadPosRankSum=4.217;VQSLOD=-0.0445;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:40,1:40:61.43:61,0,445	0/0:8,0:8:24.04:0,24,292	0/0:40,0:20:26.58:0,27,394	0/0:50,0:21:44.85:0,45,407	0/1:17,2:18:17.50:17,0,86	0/0:19,0:19:54.11:0,54,699	0/0:28,0:28:81.11:0,81,993	0/0:27,0:25:15.37:0,15,642	0/0:10,0:10:30.10:0,30,409	0/1:17,3:20:64.09:64,0,82	0/1:9,2:11:16.71:64,0,17	0/0:23,0:22:1.93:0,2,81	0/1:16,0:15:2.98:3,0,101	0/1:21,6:27:26.47:168,0,26	0/0:5,0:5:15.05:0,15,207	0/1:10,2:12:11.40:11,0,67	0/1:26,6:32:99:170,0,108	0/1:19,5:24:56.90:57,0,150	0/0:19,0:18:20.23:0,20,406	0/0:23,0:21:32.78:0,33,355	0/0:20,0:20:34.02:0,34,324	0/0:13,0:11:3.41:0,3,14	0/1:18,0:17:32.08:72,0,32	0/1:22,0:19:13.78:14,0,29	0/1:18,6:24:56.32:133,0,56	0/1:19,3:21:94.54:95,0,130	0/0:16,0:16:8.98:0,9,170	0/1:5,4:9:12.71:91,0,13
chr10	48116049	.	T	TCTC	2418.54	PASS	AB=0.882;AC=14;AF=0.250;AN=56;BaseQRankSum=8.606;DP=597;FS=10.854;HRun=0;HaplotypeScore=141.0779;InbreedingCoeff=-0.2290;MQ=60.31;MQ0=12;MQRankSum=-1.003;QD=8.92;ReadPosRankSum=1.678;VQSLOD=2.7370;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,100,1104	0/0:9,0:9:24.07:0,24,408	0/0:39,0:20:15.76:0,16,496	0/0:50,0:21:45.49:0,45,517	0/1:17,1:18:6.66:7,0,97	0/0:18,0:18:51.16:0,51,900	0/0:27,0:27:75.19:0,75,1291	0/0:27,0:25:11.07:0,11,869	0/0:11,0:11:30.10:0,30,540	0/1:17,3:20:57.50:248,0,57	0/1:9,2:11:2.76:184,0,3	0/1:23,0:22:1.96:2,0,82	0/1:16,0:15:61.09:86,0,61	0/1:21,6:27:19.31:366,0,19	0/0:5,0:5:15.05:0,15,273	0/1:10,0:12:39.84:111,0,40	0/1:26,4:32:96.35:451,0,96	0/1:19,1:24:99:212,0,135	0/0:19,0:18:39.90:0,40,601	0/0:22,0:21:17.32:0,17,481	0/0:19,0:20:36.67:0,37,423	0/1:13,0:11:4.40:42,0,4	0/1:18,0:17:29.57:30,0,61	0/0:22,0:19:11.13:0,11,54	0/1:18,6:24:46.93:373,0,47	0/1:20,2:22:99:231,0,129	0/0:16,0:16:6.30:0,6,233	0/1:5,4:9:16.82:226,0,17
chr10	48116697	.	AGTGTGTGT	A	7736.73	PASS	AB=0.697;AC=30;AF=0.536;AN=56;BaseQRankSum=9.739;DP=634;FS=4.901;HRun=0;HaplotypeScore=172.9080;InbreedingCoeff=0.3499;MQ=62.60;MQ0=5;MQRankSum=-9.604;QD=19.15;ReadPosRankSum=5.776;VQSLOD=3.5671;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:38:48.16:0,48,1788	0/0:10,0:12:27.08:0,27,780	0/0:32,0:19:3.01:0,3,73	0/0:31,0:19:18.06:0,18,438	1/1:6,11:20:9.03:208,9,0	0/0:18,0:20:36.59:0,37,1392	0/0:23,0:25:45.13:0,45,1552	0/1:21,0:26:13.82:14,0,145	0/0:17,0:17:27.09:0,27,1014	1/1:12,14:28:39.11:843,39,0	1/1:10,10:20:0.47:1,0,0	0/1:12,7:21:38.23:469,0,38	1/1:17,10:26:24.08:609,24,0	1/1:13,5:19:17.95:397,18,0	0/0:18,0:21:45.15:0,45,1703	0/1:10,8:19:99:453,0,100	1/1:13,8:21:12.84:378,13,0	1/1:14,7:23:20.75:492,21,0	0/1:11,0:17:26.97:27,0,58	0/1:7,1:19:10.44:230,0,10	0/0:20,0:33:0.66:0,1,2	1/1:4,14:19:36.12:894,36,0	1/1:4,10:14:14.77:381,15,0	0/1:14,14:29:9.56:270,0,10	1/1:7,11:19:18.06:436,18,0	0/1:14,14:30:46.71:1135,0,47	1/1:5,1:17:24.77:211,25,0	0/1:8,5:13:48:290,0,48
chr10	48116847	.	A	AGTTGTGTTGTGTGT	6682.06	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-5.978;DP=623;FS=17.466;HRun=0;HaplotypeScore=246.6028;InbreedingCoeff=0.9968;MQ=68.23;MQ0=8;MQRankSum=-5.733;QD=77.70;ReadPosRankSum=-2.358;VQSLOD=3.0213;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:25.84:0,26,1433	0/0:9,0:9:24.07:0,24,845	0/0:36,0:24:26.33:0,26,687	0/0:40,0:20:32.56:0,33,730	0/0:24,0:24:72.16:0,72,2160	0/0:21,0:21:63.20:0,63,2460	0/0:20,0:20:57.15:0,57,1610	0/0:24,0:24:60.08:0,60,1403	0/0:16,0:16:48.12:0,48,1284	0/0:18,0:18:54.17:0,54,1761	0/0:16,0:16:45.08:0,45,1093	0/0:17,0:17:41.64:0,42,1299	0/0:30,0:30:87.23:0,87,2717	0/0:13,0:13:33.11:0,33,1182	0/0:17,0:17:51.12:0,51,1610	0/0:20,0:20:57.13:0,57,1533	0/0:23,0:23:60.14:0,60,1761	0/0:24,0:24:63.20:0,63,1900	1/1:6,6:13:21.88:717,22,0	1/1:6,22:33:58.02:3096,58,0	1/1:21,0:21:23.97:874,24,0	0/0:18,0:18:51.17:0,51,1616	0/0:27,0:27:72.17:0,72,2090	0/0:35,0:35:84.20:0,84,2695	0/0:15,0:14:42.10:0,42,1044	0/0:28,0:28:78.18:0,78,2370	1/1:9,8:19:29.42:1995,29,0	0/0:11,0:11:33.04:0,33,870
chr10	48116952	.	C	CCA	1094.67	PASS	AB=0.712;AC=15;AF=0.268;AN=56;BaseQRankSum=5.880;DP=557;FS=12.107;HRun=0;HaplotypeScore=134.8362;InbreedingCoeff=-0.0688;MQ=61.24;MQ0=11;MQRankSum=-2.667;QD=3.70;ReadPosRankSum=-4.534;VQSLOD=0.3011;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:11,0:26:50.75:234,0,51	0/0:10,0:12:34.47:0,34,412	0/1:27,0:11:2.65:3,0,124	0/0:28,0:16:5.40:0,5,195	0/0:10,0:28:24.88:0,25,216	0/0:20,0:16:18.17:0,18,528	0/0:21,0:21:33.23:0,33,719	0/1:25,0:28:41.69:42,0,237	0/0:15,0:15:14.43:0,14,498	0/1:8,0:24:35.06:35,0,101	0/1:9,0:26:41.25:41,0,158	0/1:6,0:8:2.89:29,0,3	0/1:8,0:17:30.91:31,0,108	0/1:10,0:13:76.42:82,0,76	0/0:24,0:24:57.09:0,57,843	0/0:1,0:10:27.04:0,27,267	0/0:7,0:22:0.80:0,1,134	0/0:6,0:28:17.15:0,17,209	1/1:8,1:18:36.15:248,36,0	0/1:5,1:27:29.79:270,0,30	0/1:4,0:5:1.43:13,0,1	0/0:7,0:15:13.38:0,13,199	0/0:8,0:16:7.49:0,7,206	0/0:6,0:14:4.43:0,4,55	0/1:8,0:31:1.58:2,0,247	0/1:11,0:20:1.62:2,0,148	0/1:12,0:20:8.73:212,0,9	0/0:4,0:7:17.15:0,17,103
chr10	48116996	.	CA	C	7890.64	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=8.485;DP=603;FS=0.000;HRun=8;HaplotypeScore=107.5390;InbreedingCoeff=0.9569;MQ=49.86;MQ0=24;MQRankSum=-3.593;QD=23.62;ReadPosRankSum=2.412;VQSLOD=4.5677;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:24,7:30:71.59:670,72,0	0/0:13,0:13:36.08:0,36,420	0/0:44,1:12:29.10:0,29,245	0/0:59,0:9:15:0,15,160	1/1:12,13:26:71.46:662,71,0	0/0:17,0:17:48.15:0,48,579	0/0:13,0:13:33.08:0,33,385	1/1:5,14:18:31.75:372,32,0	0/0:15,1:16:19.03:0,19,482	1/1:19,13:29:51.13:760,51,0	1/1:19,12:31:75.07:702,75,0	1/1:9,2:11:24.02:226,24,0	1/1:12,8:20:56.40:511,56,0	1/1:5,8:13:33.04:313,33,0	0/0:20,0:20:54.16:0,54,643	0/0:10,0:10:15.56:0,16,244	1/1:14,10:24:60.03:570,60,0	1/1:18,9:27:69.10:663,69,0	0/0:17,0:15:6.67:0,7,264	0/0:29,0:29:66.49:0,66,924	0/0:5,0:5:11.81:0,12,131	1/1:5,5:10:4.39:208,4,0	1/1:13,8:21:60.07:567,60,0	1/1:7,6:13:30.05:289,30,0	1/1:13,11:23:63.08:594,63,0	1/1:12,5:17:21.34:379,21,0	0/0:23,0:22:54.10:0,54,690	1/1:11,4:14:42.07:405,42,0
chr10	48117014	.	C	CA	10276.24	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=6.641;DP=661;FS=1.922;HRun=7;HaplotypeScore=104.8771;InbreedingCoeff=0.9929;MQ=50.50;MQ0=25;MQRankSum=1.978;QD=29.96;ReadPosRankSum=2.697;VQSLOD=4.3817;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:23,10:33:72.10:1010,72,0	0/0:15,0:15:42.06:0,42,405	0/0:48,0:13:15.05:0,15,180	0/0:69,0:10:13.08:0,13,167	1/1:15,12:27:69.20:809,69,0	0/0:21,0:21:63.10:0,63,608	0/0:13,0:13:39.03:0,39,367	0/0:20,0:19:48.06:0,48,460	0/0:18,0:18:51.02:0,51,476	1/1:27,6:30:41.27:783,41,0	1/1:20,12:32:87.23:1005,87,0	1/1:7,4:11:30.09:362,30,0	1/1:14,7:21:60.06:688,60,0	1/1:7,7:13:36.03:400,36,0	0/0:19,0:19:54:0,54,505	0/0:12,0:12:30.03:0,30,284	1/1:19,10:29:71.96:844,72,0	1/1:14,9:23:45.53:708,46,0	0/0:17,0:14:36.04:0,36,340	0/0:28,0:29:71.99:0,72,653	0/0:10,0:10:18.03:0,18,174	1/1:6,5:11:25.65:305,26,0	1/1:17,9:26:75.20:874,75,0	1/1:6,8:14:36.11:425,36,0	1/1:14,9:22:54.16:641,54,0	1/1:13,10:23:65.79:769,66,0	0/0:25,0:25:68.99:0,69,642	1/1:19,4:23:54.17:652,54,0
chr10	48117548	.	CCAGCACTTGGCCACTTGATTTTAATCT	C	1699.30	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=3.323;DP=744;FS=0.000;HRun=0;HaplotypeScore=498.9102;InbreedingCoeff=0.9113;MQ=68.95;MQ0=0;MQRankSum=-4.006;QD=34.68;ReadPosRankSum=2.214;VQSLOD=0.4746;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,146,14332	0/0:11,0:11:21.07:0,21,2610	0/0:28,0:26:69.24:0,69,4712	0/0:22,0:22:57.20:0,57,4105	0/0:25,0:25:63.22:0,63,5831	0/0:19,0:19:57.20:0,57,5878	0/0:32,0:32:87.30:0,87,7923	1/1:17,0:17:6.02:105,6,0	0/0:21,0:21:54.19:0,54,5577	0/0:24,0:24:60.21:0,60,6699	0/0:19,0:19:51.18:0,51,5973	0/0:25,0:25:57.18:0,57,5918	0/0:31,0:31:75.26:0,75,7942	0/0:33,0:33:84.27:0,84,8335	0/0:37,0:37:99:0,99,9872	1/1:15,17:32:24.08:1705,24,0	0/0:36,0:36:96.33:0,96,10280	0/0:25,0:25:66.11:0,66,6106	0/0:28,0:28:66.23:0,66,4377	0/0:25,0:25:60.21:0,60,6576	0/0:42,0:42:99:0,108,12136	0/0:16,0:16:45.15:0,45,5193	0/0:18,0:18:51.18:0,51,4787	0/0:38,0:37:99:0,99,10181	0/0:21,0:21:60.20:0,60,6456	0/0:35,0:35:84.27:0,84,8590	0/0:30,0:30:72.25:0,72,7652	0/0:3,0:3:9.03:0,9,640
chr10	48117774	.	G	GTGGTGGGCT	38473.32	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-5.574;DP=536;FS=11.856;HRun=0;HaplotypeScore=147.7356;InbreedingCoeff=0.9981;MQ=63.77;MQ0=0;MQRankSum=-15.643;QD=109.30;ReadPosRankSum=0.143;VQSLOD=5.4134;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,15:29:63.20:2841,63,0	0/0:7,0:7:18.05:0,18,501	0/0:21,0:19:48.16:0,48,1219	0/0:23,0:23:62.17:0,62,1410	1/1:9,13:28:63.09:2608,63,0	0/0:13,0:13:39.13:0,39,1137	0/0:22,0:22:66.23:0,66,2035	0/0:22,0:22:60.21:0,60,1763	0/0:26,0:26:78.25:0,78,2346	1/1:10,7:19:51.17:2082,51,0	1/1:1,12:16:42.06:1796,42,0	1/1:4,9:15:39.13:1919,39,0	1/1:6,14:23:66.23:3211,66,0	1/1:7,6:17:45.12:2027,45,0	0/0:21,0:21:60.21:0,60,1865	0/0:27,0:27:81.28:0,81,2474	1/1:8,10:22:43.03:2054,43,0	1/1:6,7:18:33.11:1592,33,0	1/1:8,3:17:48.15:1710,48,0	1/1:9,6:17:39.09:1764,39,0	1/1:11,9:21:42.14:1824,42,0	1/1:6,11:20:45.15:2093,45,0	1/1:4,7:11:27.09:1294,27,0	1/1:4,10:15:39.13:1896,39,0	1/1:6,6:14:33.07:1475,33,0	1/1:2,15:21:60.21:2756,60,0	1/1:4,10:20:51.18:2371,51,0	1/1:1,6:8:24.08:1158,24,0
chr10	48118772	.	GTT	G	2195.65	PASS	AB=0.707;AC=34;AF=0.607;AN=56;BaseQRankSum=0.105;DP=344;FS=11.499;HRun=16;HaplotypeScore=61.1179;InbreedingCoeff=0.7395;MQ=76.18;MQ0=2;MQRankSum=-0.947;QD=10.71;ReadPosRankSum=4.679;VQSLOD=1.3223;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,16:28:6.71:262,7,0	0/0:6,0:6:8.98:0,9,86	0/0:30,0:16:1.19:0,1,166	0/0:15,0:11:10.38:0,10,57	1/1:4,7:12:26.41:199,26,0	0/0:11,0:13:21.60:0,22,192	0/0:15,0:17:29.99:0,30,293	1/1:8,5:15:11.56:129,12,0	0/0:11,0:12:29.91:0,30,305	1/1:3,12:16:32.41:298,32,0	1/1:1,5:7:8.93:117,9,0	0/0:3,0:8:13.67:0,14,47	1/1:1,1:3:1.03:22,1,0	1/1:1,5:6:14.98:125,15,0	0/0:9,0:9:21.01:0,21,227	0/0:11,0:12:23.39:0,23,237	1/1:8,14:23:41.50:337,42,0	1/1:2,7:11:20.43:149,20,0	1/1:4,0:10:16.28:70,16,0	1/1:2,0:6:8.13:35,8,0	1/1:3,0:15:30.15:129,30,0	0/1:4,1:7:2.93:3,0,30	0/1:6,1:10:6.56:7,0,55	0/0:9,0:17:23.71:0,24,84	1/1:0,9:10:14.99:172,15,0	1/1:5,4:11:26.25:183,26,0	1/1:2,0:13:30.39:139,30,0	1/1:1,1:2:2.96:25,3,0
chr10	48118894	.	CGG	C	804.89	PASS	AB=0.817;AC=34;AF=0.680;AN=50;BaseQRankSum=-0.174;DP=149;FS=20.901;HRun=12;HaplotypeScore=38.8719;InbreedingCoeff=0.2730;MQ=83.29;MQ0=1;MQRankSum=-0.998;QD=7.32;ReadPosRankSum=4.268;VQSLOD=-0.4245;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:6:0:0,0,0	./.	0/1:18,0:8:15.36:15,0,87	0/0:14,0:8:7.76:0,8,75	./.	0/0:1,0:2:3:0,3,28	0/0:2,0:2:5.38:0,5,39	1/1:6,0:7:2.56:11,3,0	0/0:5,0:6:10.28:0,10,64	1/1:3,1:4:2.59:29,3,0	./.	0/1:1,1:2:18.48:23,0,18	1/1:3,4:7:11.99:116,12,0	1/1:3,1:4:8.82:66,9,0	0/0:3,0:3:5.98:0,6,59	1/1:3,2:6:8.68:69,9,0	1/1:7,5:12:14.63:119,15,0	1/1:3,2:5:3.82:57,4,0	1/1:1,0:2:2.68:11,3,0	1/1:1,0:4:5.36:22,5,0	1/1:3,0:4:5.17:19,5,0	1/1:0,2:2:5.98:47,6,0	1/1:3,2:5:9:82,9,0	1/1:3,0:4:5.66:33,6,0	1/1:1,1:2:3.01:30,3,0	0/1:7,1:8:11.89:79,0,12	1/1:1,1:9:18.41:81,18,0	0/1:3,2:5:30.18:45,0,30
chr10	48118907	.	CG	C	1675.84	PASS	AC=38;AF=0.760;AN=50;BaseQRankSum=-0.917;DP=174;FS=2.098;HRun=12;HaplotypeScore=33.8597;InbreedingCoeff=0.6598;MQ=85.20;MQ0=1;MQRankSum=-2.449;QD=14.32;ReadPosRankSum=2.539;VQSLOD=3.6144;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,8:8:2.92:17,3,0	./.	0/0:22,0:9:5.87:0,6,97	0/0:18,0:10:16.40:0,16,150	./.	0/0:4,0:4:5.97:0,6,55	0/0:2,0:2:2.94:0,3,18	1/1:1,5:6:8.94:78,9,0	0/0:5,0:5:2.51:0,3,8	1/1:1,3:4:9.01:84,9,0	./.	1/1:3,1:4:6.47:57,6,0	1/1:1,4:5:15.01:138,15,0	1/1:7,1:8:9.52:52,10,0	0/0:4,0:4:11.96:0,12,104	1/1:5,3:8:14.94:127,15,0	1/1:11,3:14:26.65:206,27,0	1/1:2,2:4:8.52:85,9,0	1/1:5,1:6:15.02:142,15,0	1/1:2,3:5:12:105,12,0	1/1:2,8:10:6:55,6,0	1/1:1,3:4:8.94:69,9,0	1/1:2,2:4:8.95:74,9,0	1/1:0,2:2:6:54,6,0	1/1:2,1:3:6:55,6,0	1/1:5,0:5:8.85:60,9,0	1/1:5,6:11:26.63:222,27,0	1/1:4,2:6:17.80:150,18,0
chr10	48119758	.	ATT	A	3953.82	PASS	AB=0.603;AC=32;AF=0.571;AN=56;BaseQRankSum=2.676;DP=590;FS=6.472;HRun=16;HaplotypeScore=84.0247;InbreedingCoeff=0.8050;MQ=66.73;MQ0=1;MQRankSum=-0.735;QD=9.55;ReadPosRankSum=6.514;VQSLOD=1.8248;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:14,20:42:36.35:349,36,0	0/0:7,0:7:15.03:0,15,174	0/0:10,0:7:12.39:0,12,68	0/0:14,0:10:3.80:0,4,99	1/1:5,12:21:32.89:299,33,0	0/0:10,0:14:16.76:0,17,158	0/0:20,0:24:53.45:0,53,609	0/1:10,4:34:33.10:33,0,238	0/0:9,0:12:30.02:0,30,312	1/1:13,13:28:41.07:320,41,0	1/1:2,10:12:14.83:189,15,0	0/0:4,0:10:17.84:0,18,90	0/0:10,0:26:23.79:0,24,146	1/1:12,11:23:19.36:173,19,0	0/0:16,0:17:50.40:0,50,538	1/1:3,12:19:14.29:182,14,0	1/1:12,23:38:58.85:482,59,0	1/1:8,6:18:7.43:163,7,0	1/1:8,3:25:44.49:228,44,0	1/1:5,0:19:35.79:166,36,0	1/1:1,0:8:19.19:82,19,0	0/0:4,0:19:36.61:0,37,186	0/1:7,2:18:24.59:25,0,57	0/0:7,0:22:36.65:0,37,196	1/1:5,17:25:22.06:323,22,0	1/1:13,18:34:35.42:425,35,0	1/1:8,0:32:46.42:199,46,0	1/1:4,13:18:38.72:315,39,0
chr10	48120813	.	TTGCTGC	T	3818.13	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=10.235;DP=652;FS=2.343;HRun=0;HaplotypeScore=135.6550;InbreedingCoeff=0.9851;MQ=71.38;MQ0=0;MQRankSum=-9.267;QD=33.20;ReadPosRankSum=0.010;VQSLOD=3.5361;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:84.27:0,84,2656	0/0:9,0:9:27.09:0,27,870	0/0:18,0:15:30.06:0,30,849	0/0:35,0:33:69:0,69,1848	0/0:17,0:17:21.07:0,21,675	0/0:22,0:23:48.11:0,48,1439	0/0:40,0:42:96.17:0,96,2762	1/1:12,13:25:36.11:718,36,0	0/0:18,0:18:48.16:0,48,1540	0/0:25,0:25:36.11:0,36,928	0/0:12,0:12:12.04:0,12,399	0/0:12,0:12:24.07:0,24,713	0/0:31,0:31:72.25:0,72,2321	0/0:24,0:24:60.21:0,60,2001	0/0:31,0:31:72.25:0,72,2363	0/0:8,0:22:42.14:0,42,1059	0/0:29,0:29:75.26:0,75,2444	0/0:23,0:23:54.19:0,54,1807	1/1:5,11:16:33.10:646,33,0	1/1:5,12:17:42.14:848,42,0	1/1:18,11:29:13.77:319,14,0	0/0:17,0:17:30.10:0,30,893	0/0:13,0:13:24.08:0,24,707	0/0:44,0:44:99:0,102,3326	0/0:13,0:13:30.10:0,30,899	0/0:23,0:23:45.15:0,45,1355	1/1:6,22:28:60.21:1286,60,0	0/0:12,0:12:27.09:0,27,848
chr10	48121177	.	G	GGT	421.16	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=0.740;DP=712;FS=7.207;HRun=0;HaplotypeScore=150.0974;InbreedingCoeff=0.9169;MQ=58.41;MQ0=3;MQRankSum=-0.857;QD=14.52;ReadPosRankSum=0.945;VQSLOD=3.2668;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:18,11:29:33.10:516,33,0	0/0:5,0:5:12.04:0,12,151	0/0:43,0:30:66.20:0,66,815	0/0:32,0:19:45.57:0,46,534	0/0:28,0:28:45.13:0,45,555	0/0:17,0:17:36.12:0,36,454	0/0:21,0:20:28.14:0,28,533	0/0:34,0:34:78.14:0,78,964	0/0:28,0:28:63.19:0,63,782	0/0:28,0:27:71.98:0,72,866	0/0:19,0:19:30.10:0,30,379	0/0:18,0:17:27:0,27,341	0/0:18,0:15:21.07:0,21,272	0/0:16,0:15:15.05:0,15,189	0/0:37,0:37:90.27:0,90,1121	0/0:21,0:21:33.10:0,33,406	0/0:31,0:31:39.58:0,40,556	0/0:21,0:21:21.49:0,21,333	0/0:23,0:22:48.12:0,48,567	0/0:24,0:24:54.15:0,54,655	0/0:55,0:53:99:0,113,1399	0/0:22,0:22:36.11:0,36,450	0/0:27,0:27:33.11:0,33,416	0/0:32,0:32:12.04:0,12,152	0/0:25,0:25:48.61:0,49,593	0/0:28,0:28:52.07:0,52,824	0/0:20,0:20:48.09:0,48,581	0/0:10,0:10:24.08:0,24,303
chr10	48121204	.	A	ATG	295.57	PASS	AB=0.992;AC=8;AF=0.143;AN=56;BaseQRankSum=7.074;DP=835;FS=6.198;HRun=0;HaplotypeScore=168.4675;InbreedingCoeff=0.0641;MQ=45.23;MQ0=52;MQRankSum=-7.552;QD=1.33;ReadPosRankSum=-4.965;VQSLOD=0.1194;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,1:30:31.19:0,31,410	0/0:7,0:6:12.04:0,12,160	0/0:16,0:8:5.84:0,6,53	0/0:16,1:9:13.02:0,13,97	0/0:34,0:32:24.08:0,24,314	0/0:21,0:20:39.21:0,39,624	0/0:38,0:32:55.49:0,55,721	1/1:52,0:25:11.23:68,11,0	0/0:38,0:38:84.24:0,84,1080	0/1:37,0:30:68.02:68,0,524	0/0:25,0:24:18.06:0,18,240	0/0:27,0:26:10.25:0,10,265	0/1:25,0:25:17.36:17,0,146	0/0:22,0:21:6.02:0,6,80	0/0:38,1:37:99:0,99,1284	0/0:31,0:31:51.17:0,51,676	0/1:31,0:31:60.08:60,0,198	0/1:20,0:18:51:51,0,129	0/1:20,1:14:54.99:55,0,283	0/0:23,0:22:54.18:0,54,717	0/0:86,3:79:99:0,144,1863	0/0:26,0:24:24.08:0,24,318	0/0:32,0:31:15.05:0,15,197	0/0:37,1:37:6.02:0,6,74	0/0:25,0:24:21.07:0,21,276	0/1:37,0:32:99:114,0,610	0/0:23,0:20:42.10:0,42,536	0/0:10,0:10:15.04:0,15,182
chr10	48121208	.	GTGTA	G	383.83	PASS	AB=1.000;AC=4;AF=0.071;AN=56;BaseQRankSum=1.204;DP=830;FS=0.854;HRun=0;HaplotypeScore=186.6555;InbreedingCoeff=0.3860;MQ=44.31;MQ0=54;MQRankSum=-4.993;QD=4.26;ReadPosRankSum=-3.663;VQSLOD=1.5545;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:30:22.54:0,23,580	0/0:5,0:4:12.04:0,12,314	0/1:9,0:4:5.03:5,0,39	0/0:14,0:7:9.69:0,10,86	0/0:34,0:32:23.98:0,24,434	0/0:22,0:22:56.26:0,56,1300	0/0:34,0:28:62.57:0,63,1509	1/1:48,3:23:33.61:474,34,0	0/0:37,0:37:84.13:0,84,2013	0/0:40,0:33:83.33:0,83,890	0/0:27,0:25:17.92:0,18,313	0/0:26,1:26:26.74:0,27,411	0/0:25,0:25:20.51:0,21,218	0/0:21,0:20:7.58:0,8,154	0/0:39,0:37:99:0,102,2535	0/0:34,0:34:50.91:0,51,707	0/1:30,0:30:10.76:11,0,196	0/0:20,0:18:4.24:0,4,157	0/0:19,0:11:27.48:0,27,507	0/0:25,0:24:57.18:0,57,1354	0/0:91,0:79:99:0,151,3291	0/0:25,0:23:23.66:0,24,354	0/0:31,0:30:15.03:0,15,267	0/0:40,0:39:5.38:0,5,86	0/0:27,0:26:21.02:0,21,291	0/0:40,0:35:84.84:0,85,1092	0/0:21,0:18:39.60:0,40,911	0/0:10,0:10:17.79:0,18,198
chr10	48121210	.	GTA	G	392.33	PASS	AB=0.969;AC=6;AF=0.107;AN=56;BaseQRankSum=3.133;DP=831;FS=3.292;HRun=0;HaplotypeScore=169.7856;InbreedingCoeff=0.2205;MQ=44.06;MQ0=57;MQRankSum=-6.574;QD=2.67;ReadPosRankSum=-3.660;VQSLOD=1.1976;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:30:25.95:0,26,559	0/0:5,0:4:12.04:0,12,231	0/1:7,0:4:4.99:5,0,51	0/0:12,0:7:6.66:0,7,85	0/0:34,0:32:23.96:0,24,343	0/0:23,0:22:46.25:0,46,929	0/0:34,0:28:55.77:0,56,1089	1/1:45,4:18:42.53:399,43,0	0/0:37,0:37:87.13:0,87,1496	0/0:41,0:33:54.47:0,54,1004	0/0:29,0:27:18.06:0,18,325	0/0:27,0:26:22.83:0,23,353	0/0:25,0:25:20.65:0,21,263	0/0:20,0:19:8.96:0,9,132	0/0:40,0:38:99:0,108,1912	0/0:34,0:34:50.97:0,51,897	0/1:29,1:30:38.85:39,0,194	0/1:18,2:18:48.17:48,0,149	0/0:20,0:12:13.32:0,13,372	0/0:28,0:26:60.16:0,60,929	0/0:93,1:82:99:0,152,2381	0/0:25,0:23:24.08:0,24,411	0/0:30,0:29:14.98:0,15,207	0/0:40,0:39:6.02:0,6,102	0/0:22,1:22:21.02:0,21,273	0/1:41,0:35:27.63:28,0,895	0/0:22,0:19:41.96:0,42,649	0/0:10,0:10:17.74:0,18,190
chr10	48121222	.	A	ATG	2233.82	PASS	AB=0.905;AC=25;AF=0.521;AN=48;BaseQRankSum=5.291;DP=825;FS=17.438;HRun=0;HaplotypeScore=172.9417;InbreedingCoeff=0.3458;MQ=42.13;MQ0=66;MQRankSum=-7.358;QD=4.81;ReadPosRankSum=-2.631;VQSLOD=1.7107;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:32:12.08:12,0,24	0/0:4,0:3:9.03:0,9,120	./.	./.	./.	0/0:30,0:29:62.57:0,63,930	0/0:38,0:32:66.70:0,67,856	1/1:57,0:18:6.54:117,7,0	0/0:31,0:31:60.31:0,60,1018	0/1:33,8:30:41.76:655,0,42	1/1:16,11:25:9.03:134,9,0	1/1:16,8:24:14.99:170,15,0	1/1:16,12:28:17.54:214,18,0	1/1:13,5:18:3.01:37,3,0	0/0:40,0:38:93.29:0,93,1220	0/0:34,0:33:36.93:0,37,162	1/1:23,5:28:12.25:111,12,0	0/1:20,2:20:2.69:55,0,3	0/1:20,0:12:17.85:18,0,94	0/0:28,0:26:45.53:0,46,188	0/0:94,0:82:54.69:0,55,370	1/1:13,13:24:14.80:239,15,0	./.	1/1:19,25:41:2.96:52,3,0	1/1:15,7:20:3.01:52,3,0	0/1:35,7:35:43.55:486,0,44	0/1:20,0:16:13.56:14,0,62	0/1:5,3:8:5.43:40,0,5
chr10	48121226	.	GTGTA	G	3675.57	PASS	AB=0.879;AC=26;AF=0.542;AN=48;BaseQRankSum=6.928;DP=821;FS=13.645;HRun=0;HaplotypeScore=185.5403;InbreedingCoeff=0.3337;MQ=42.31;MQ0=67;MQRankSum=-4.003;QD=6.73;ReadPosRankSum=-3.631;VQSLOD=1.1306;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:21,12:32:36.76:475,37,0	0/0:5,0:3:9.03:0,9,243	./.	./.	./.	0/0:29,0:28:54.77:0,55,1815	0/0:38,0:32:70.99:0,71,1792	0/1:58,1:20:79.13:79,0,190	0/0:32,0:32:66.25:0,66,1851	0/1:31,10:30:99:646,0,113	1/1:18,8:24:3.26:59,3,0	1/1:20,6:25:14.44:140,14,0	1/1:16,17:29:10.76:95,11,0	1/1:9,10:19:2.37:8,2,0	0/0:42,0:39:99:0,99,2463	1/1:7,27:34:42.04:792,42,0	1/1:11,15:26:4.89:119,5,0	1/1:9,12:19:12.50:139,13,0	0/0:17,0:12:4.76:0,5,181	0/0:30,0:28:25.35:0,25,60	0/1:90,1:79:48.93:150,0,49	1/1:21,5:23:16.15:158,16,0	./.	1/1:41,0:38:3:25,3,0	0/0:12,12:22:2.22:0,2,7	0/1:23,18:34:99:697,0,117	0/1:20,0:16:7.36:44,0,7	0/1:6,2:8:47.69:48,0,63
chr10	48121228	.	GTA	G	5051.23	PASS	AB=0.963;AC=26;AF=0.542;AN=48;BaseQRankSum=8.607;DP=818;FS=0.000;HRun=0;HaplotypeScore=164.5900;InbreedingCoeff=0.3746;MQ=42.09;MQ0=67;MQRankSum=-1.079;QD=9.79;ReadPosRankSum=-0.672;VQSLOD=4.4029;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:32,1:32:35.82:226,36,0	0/0:5,0:3:9.03:0,9,173	./.	./.	./.	0/0:29,0:28:57.52:0,58,1357	0/0:37,1:32:67.55:0,68,1301	0/0:61,0:21:2.24:0,2,218	0/0:32,0:32:66.02:0,66,1371	0/1:41,1:31:58.88:340,0,59	1/1:27,0:25:8.91:61,9,0	1/1:24,0:23:12.17:127,12,0	0/1:34,0:29:14.37:14,0,29	0/0:19,0:18:2.49:0,2,9	0/0:38,0:35:99:0,99,1787	1/1:34,0:33:40.91:270,41,0	1/1:25,0:25:13.17:73,13,0	0/1:21,0:19:6.90:95,0,7	0/1:12,4:12:99:256,0,119	1/1:4,26:28:51.17:779,51,0	1/1:42,53:83:99:1917,141,0	1/1:25,0:22:11.45:81,11,0	./.	1/1:42,0:39:4.98:30,5,0	0/0:22,0:20:2.90:0,3,16	0/1:39,0:32:99:283,0,156	1/1:9,12:18:38.96:487,39,0	0/1:8,0:8:11.10:11,0,45
chr10	48121230	.	A	ATGTG	2757.23	PASS	AB=0.945;AC=23;AF=0.479;AN=48;BaseQRankSum=7.901;DP=810;FS=24.456;HRun=0;HaplotypeScore=189.9320;InbreedingCoeff=0.4519;MQ=41.99;MQ0=64;MQRankSum=-5.972;QD=7.41;ReadPosRankSum=-4.027;VQSLOD=0.8244;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:33:38.64:174,0,39	0/0:5,0:3:9.03:0,9,159	./.	./.	./.	0/0:28,0:27:45.20:0,45,1154	0/0:38,0:32:62.03:0,62,1175	0/0:61,0:21:24.80:0,25,439	0/0:32,0:31:69.09:0,69,1077	0/1:39,3:31:34.91:729,0,35	1/1:21,5:24:3.01:64,3,0	1/1:15,8:22:11:176,11,0	1/1:23,11:29:15.70:251,16,0	1/1:12,5:16:3.01:62,3,0	0/0:37,0:34:90.31:0,90,1571	0/0:34,0:33:26.34:0,26,251	1/1:23,2:25:14.79:158,15,0	1/1:20,0:19:13.13:127,13,0	0/1:16,0:13:31.89:32,0,174	0/0:30,0:28:50.79:0,51,393	0/0:92,0:80:62.47:0,62,771	1/1:17,9:23:17.49:243,17,0	./.	1/1:40,2:39:6:86,6,0	1/1:19,4:21:3:27,3,0	0/1:33,4:30:60.72:725,0,61	0/0:22,0:18:22.32:0,22,180	0/1:7,1:8:37.68:81,0,38
chr10	48121282	.	ATG	A	174.75	PASS	AB=0.941;AC=11;AF=0.196;AN=56;BaseQRankSum=2.708;DP=848;FS=1.652;HRun=0;HaplotypeScore=156.3081;InbreedingCoeff=-0.0296;MQ=39.72;MQ0=80;MQRankSum=-3.223;QD=0.74;ReadPosRankSum=-2.816;VQSLOD=2.0063;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,1:37:2.24:0,2,117	0/0:8,0:6:15.02:0,15,225	0/0:41,0:3:8.92:0,9,100	0/0:47,0:8:8.86:0,9,84	0/0:25,2:27:5.50:0,6,39	0/0:22,0:22:15.59:0,16,754	0/0:35,0:27:63.60:0,64,957	0/0:45,0:38:22.62:0,23,151	0/0:28,0:26:35.20:0,35,683	0/1:34,2:31:35.62:36,0,240	1/1:14,1:16:0.27:3,0,0	0/1:25,4:28:12.32:21,0,12	0/1:23,2:22:30.03:30,0,33	0/0:16,2:18:8.47:0,8,66	0/0:38,0:33:90.29:0,90,1412	0/0:25,4:31:13.17:0,13,128	0/0:13,1:14:15.02:0,15,112	0/1:14,0:13:13.50:13,0,48	0/1:19,0:17:24.14:24,0,64	0/0:38,3:39:0.83:0,1,74	0/0:79,3:73:34.06:0,34,201	0/0:22,2:23:13.03:0,13,90	1/1:26,2:28:1.79:36,2,0	0/0:37,0:34:6.74:0,7,63	0/0:19,0:16:1.84:0,2,5	0/1:29,3:29:88.34:88,0,171	0/1:26,3:24:55.34:55,0,57	0/0:6,0:6:6.48:0,6,74
chr10	48121292	.	GTA	G	2147.44	PASS	AB=0.989;AC=26;AF=0.464;AN=56;BaseQRankSum=6.573;DP=881;FS=2.380;HRun=0;HaplotypeScore=155.2462;InbreedingCoeff=-0.3936;MQ=37.97;MQ0=83;MQRankSum=-1.395;QD=2.92;ReadPosRankSum=0.208;VQSLOD=2.9310;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:41,1:41:78.47:170,0,78	0/0:8,0:7:13.29:0,13,209	0/0:33,0:3:1.85:0,2,37	0/1:32,0:3:4.76:5,0,9	0/1:33,0:31:10.62:30,0,11	0/0:26,0:26:9.67:0,10,417	0/0:35,0:27:55.21:0,55,532	1/1:43,0:32:21.85:360,22,0	0/1:24,1:23:12.39:12,0,397	0/1:39,2:35:89.22:221,0,89	0/1:17,0:17:3.04:17,0,3	0/1:34,0:33:14.96:90,0,15	0/1:30,0:25:6.25:50,0,6	0/1:24,0:22:12.64:41,0,13	0/0:44,0:38:69.44:0,69,895	0/1:27,0:27:30.60:107,0,31	0/1:20,0:18:46.77:63,0,47	0/1:16,0:15:28.81:29,0,37	0/1:30,0:24:82.73:121,0,83	0/1:42,0:39:19.03:172,0,19	1/1:86,1:75:20.35:285,20,0	0/1:25,0:23:7.67:18,0,8	1/1:26,1:27:5.86:37,6,0	0/1:41,0:36:26.18:26,0,30	0/1:24,0:21:17.01:36,0,17	0/1:34,0:30:79.74:279,0,80	0/1:31,2:26:31.36:99,0,31	0/1:6,0:6:19.50:43,0,20
chr10	48121302	.	G	GTA	1658.20	PASS	AB=0.989;AC=21;AF=0.375;AN=56;BaseQRankSum=7.439;DP=869;FS=30.719;HRun=0;HaplotypeScore=156.4040;InbreedingCoeff=-0.1928;MQ=38.27;MQ0=77;MQRankSum=0.597;QD=2.92;ReadPosRankSum=2.598;VQSLOD=1.3207;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:40,3:42:7.68:369,8,0	0/0:8,0:7:14.98:0,15,200	0/0:27,0:4:11.86:0,12,117	0/0:33,0:6:14.96:0,15,137	0/0:31,0:29:8.92:0,9,91	0/0:26,0:26:53.41:0,53,490	0/0:36,0:28:59.83:0,60,504	0/1:44,0:31:11.20:11,0,340	0/0:27,0:25:50.83:0,51,482	0/1:40,0:34:99:136,0,215	1/1:17,0:17:2.56:20,3,0	0/1:35,0:34:22.57:23,0,83	0/0:27,0:22:9.66:0,10,84	0/1:24,0:22:44.07:44,0,48	0/0:45,0:38:98.91:0,99,959	0/1:24,1:24:23.52:57,0,24	0/1:25,0:23:43.76:44,0,71	0/1:13,0:12:13.69:14,0,123	0/1:29,0:23:82.27:185,0,82	0/1:39,2:39:48.41:247,0,48	1/1:78,1:68:26.63:254,27,0	0/1:25,0:23:6.78:7,0,82	0/1:26,0:26:13.63:14,0,40	0/0:41,0:35:0.52:0,1,107	0/1:26,0:23:29.40:29,0,58	0/1:36,0:32:99:201,0,204	0/1:30,3:26:79.53:167,0,80	0/1:6,0:6:0.53:1,0,28
chr10	48124663	.	TCACACACACACACACACACACACACA	T	7534.88	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=9.627;DP=696;FS=0.619;HRun=0;HaplotypeScore=359.6566;InbreedingCoeff=0.8497;MQ=54.17;MQ0=30;MQRankSum=-6.231;QD=58.87;ReadPosRankSum=0.882;VQSLOD=2.4305;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:33:60.19:0,60,4165	0/0:11,0:10:21.07:0,21,2461	0/0:52,0:13:0.88:0,1,2	0/0:66,0:22:9.01:0,9,160	0/0:12,0:14:21.07:0,21,2044	0/0:17,0:21:18.06:0,18,1768	0/0:27,0:34:27.22:0,27,2354	1/1:24,8:29:21:326,21,0	0/0:14,0:18:15.05:0,15,1017	0/0:24,0:24:57.20:0,57,5802	0/0:17,0:17:23.80:0,24,2094	0/0:12,0:13:24.06:0,24,2232	0/0:11,0:15:30.10:0,30,2923	0/0:19,0:23:55.40:0,55,5173	0/0:30,0:33:72.70:0,73,5930	1/1:8,9:17:18.06:1224,18,0	0/0:30,0:34:75.24:0,75,7235	0/0:23,0:26:48.16:0,48,3722	1/1:10,5:15:9.03:353,9,0	1/1:14,11:25:24.08:1552,24,0	0/0:16,5:21:3.01:0,3,322	0/0:14,0:14:24.08:0,24,2218	0/0:11,0:11:2.22:0,2,221	0/0:29,0:31:46.96:0,47,4805	0/0:24,0:23:36.11:0,36,3340	0/0:19,0:19:39.13:0,39,3845	1/1:15,24:39:60.21:4080,60,0	0/0:6,0:7:18.04:0,18,1739
chr10	48126725	.	A	AGG	13675.65	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-9.902;DP=650;FS=5.234;HRun=1;HaplotypeScore=78.1980;InbreedingCoeff=0.9955;MQ=96.19;MQ0=1;MQRankSum=-2.622;QD=48.32;ReadPosRankSum=5.163;VQSLOD=4.8601;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,123,1770	0/0:8,0:8:24.08:0,24,367	0/0:28,0:28:78.05:0,78,1146	0/0:35,0:35:99:0,102,1441	1/1:1,17:19:51.17:982,51,0	0/0:23,0:23:66.21:0,66,983	0/0:15,0:15:45.14:0,45,664	0/0:37,0:37:99:0,105,1590	0/0:25,0:25:75.22:0,75,1105	1/1:1,23:24:72.20:1312,72,0	1/1:1,24:25:54.14:1005,54,0	1/1:1,15:16:48.16:926,48,0	1/1:1,23:24:69.24:1321,69,0	1/1:1,12:13:33.11:637,33,0	0/0:30,0:30:90.28:0,90,1332	0/0:19,0:19:51.17:0,51,781	1/1:1,25:27:66.23:1275,66,0	1/1:3,20:24:45.11:865,45,0	0/0:20,0:20:60.18:0,60,895	0/0:24,0:24:69.22:0,69,1032	0/0:24,0:24:66.21:0,66,987	1/1:2,21:23:53.86:1042,54,0	1/1:0,20:20:54.02:1043,54,0	1/1:0,16:17:39.13:753,39,0	1/1:1,18:20:51.17:960,51,0	1/1:0,24:24:72.22:1322,72,0	0/0:37,0:37:99:0,108,1634	1/1:0,5:6:12.04:232,12,0
chr10	48128581	.	C	CT	6578.10	PASS	AB=0.788;AC=30;AF=0.536;AN=56;BaseQRankSum=-6.669;DP=644;FS=14.261;HRun=11;HaplotypeScore=74.2993;InbreedingCoeff=0.8390;MQ=71.16;MQ0=1;MQRankSum=2.169;QD=17.59;ReadPosRankSum=-1.500;VQSLOD=4.0265;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:65.65:0,66,511	0/0:7,0:7:17.91:0,18,139	0/0:37,0:23:26.67:0,27,149	0/1:28,0:18:23.34:23,0,58	1/1:4,32:36:56.95:723,57,0	0/0:23,0:23:59.76:0,60,464	0/0:18,0:18:20.14:0,20,320	1/1:9,22:30:53.86:501,54,0	0/0:27,2:29:4.82:0,5,402	1/1:2,23:25:59.15:582,59,0	1/1:6,21:28:53.09:549,53,0	1/1:4,11:15:27.05:274,27,0	0/1:5,14:19:3.75:234,0,4	1/1:1,16:20:24.37:383,24,0	0/0:18,0:19:46.85:0,47,354	0/0:20,0:20:53.76:0,54,416	1/1:7,25:32:43.12:562,43,0	1/1:2,20:23:56.95:562,57,0	0/0:17,0:17:41.82:0,42,325	0/0:31,0:31:62.35:0,62,475	0/0:13,0:13:8.54:0,9,187	1/1:3,6:10:20.77:170,21,0	1/1:4,13:17:9.83:282,10,0	1/1:6,13:19:15.83:335,16,0	1/1:3,20:23:42.08:425,42,0	1/1:8,25:33:25.50:607,26,0	0/0:23,1:24:27.17:0,27,383	1/1:2,12:14:36.07:365,36,0
chr10	48128594	.	A	AT	433.84	PASS	AB=1.000;AC=4;AF=0.071;AN=56;BaseQRankSum=2.951;DP=659;FS=2.448;HRun=8;HaplotypeScore=95.0020;InbreedingCoeff=0.4712;MQ=72.30;MQ0=1;MQRankSum=-2.123;QD=4.62;ReadPosRankSum=-3.484;VQSLOD=-0.0863;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:74.47:0,74,674	0/0:10,0:10:24:0,24,219	0/1:43,0:26:12.47:12,0,127	0/1:25,0:17:8.02:8,0,106	0/0:37,0:37:94.19:0,94,654	0/0:26,0:26:75.02:0,75,680	0/0:19,0:19:31.34:0,31,413	1/1:12,13:23:48.58:523,49,0	0/0:27,0:27:77.87:0,78,692	0/0:24,0:24:56.03:0,56,443	0/0:29,0:29:66.95:0,67,465	0/0:15,0:15:23.52:0,24,222	0/0:22,0:22:41.57:0,42,311	0/0:22,0:22:39.99:0,40,312	0/0:21,0:21:60.02:0,60,544	0/0:23,0:23:63.01:0,63,572	0/0:30,0:30:57.54:0,58,381	0/0:25,0:25:63.21:0,63,425	0/0:19,0:19:47.94:0,48,421	0/0:30,0:30:89.79:0,90,806	0/0:12,0:12:32.95:0,33,290	0/0:11,0:11:20.78:0,21,162	0/0:17,0:17:37.37:0,37,296	0/0:16,0:16:9.29:0,9,227	0/0:30,0:30:65.54:0,66,505	0/0:29,0:29:71.14:0,71,534	0/0:27,0:27:74.01:0,74,649	0/0:13,0:13:36.98:0,37,234
chr10	48128896	.	G	GA	14169.15	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-10.569;DP=746;FS=0.880;HRun=0;HaplotypeScore=73.4075;InbreedingCoeff=0.9978;MQ=70.94;MQ0=8;MQRankSum=-1.531;QD=42.42;ReadPosRankSum=5.183;VQSLOD=5.1876;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:58:99:0,166,2286	0/0:13,0:13:36.11:0,36,488	0/0:21,0:13:36.12:0,36,503	0/0:34,0:26:78.10:0,78,1009	1/1:0,28:28:75.26:1197,75,0	0/0:31,0:31:93.30:0,93,1284	0/0:32,0:32:96.27:0,96,1273	0/0:22,0:21:63.19:0,63,848	0/0:23,0:24:70.44:0,70,919	1/1:1,22:22:63.21:1003,63,0	1/1:0,22:22:57.19:910,57,0	1/1:1,23:24:66.22:1055,66,0	1/1:0,19:18:48.16:767,48,0	1/1:0,21:21:60.20:959,60,0	0/0:26,0:25:75.25:0,75,1047	0/0:22,0:22:63.20:0,63,866	1/1:2,42:44:99:1917,120,0	1/1:0,21:21:51.17:814,51,0	0/0:21,0:17:48.14:0,48,651	0/0:26,0:26:78.26:0,78,1090	0/0:50,0:50:99:0,150,2054	1/1:0,25:24:69.24:1101,69,0	1/1:0,19:19:51.11:784,51,0	1/1:0,47:47:99:1819,114,0	1/1:0,15:15:42.14:667,42,0	1/1:0,20:20:60.19:936,60,0	0/0:32,0:32:96.28:0,96,1282	1/1:0,6:6:15.05:239,15,0
chr10	48129246	.	AAGTCAC	A	13379.12	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=17.744;DP=657;FS=17.022;HRun=0;HaplotypeScore=159.4343;InbreedingCoeff=0.9927;MQ=83.54;MQ0=0;MQRankSum=-18.408;QD=52.67;ReadPosRankSum=-0.727;VQSLOD=3.9502;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,135,4683	0/0:11,0:11:33.11:0,33,1174	0/0:27,0:27:81.28:0,81,2593	0/0:25,0:25:63.31:0,63,2006	1/1:3,11:14:32.96:491,33,0	0/0:20,0:20:60.21:0,60,2126	0/0:39,0:39:99:0,111,3956	0/0:29,0:28:84.29:0,84,2933	0/0:30,0:30:90.29:0,90,3120	1/1:2,30:32:84.27:1936,84,0	1/1:0,16:16:45.06:893,45,0	1/1:2,12:14:33.11:746,33,0	1/1:0,22:22:66.23:1556,66,0	1/1:2,22:24:63.22:1474,63,0	0/0:33,0:33:96.32:0,96,3329	0/0:26,0:26:75.26:0,75,2672	1/1:3,18:21:36.12:850,36,0	1/1:4,12:16:24.08:567,24,0	0/0:26,0:26:72.24:0,72,2468	0/0:27,0:27:78.27:0,78,2780	0/0:41,0:41:99:0,120,4079	1/1:0,11:11:27.09:573,27,0	1/1:1,12:13:30.03:524,30,0	1/1:4,11:15:11.71:232,12,0	1/1:0,20:20:57.19:1179,57,0	1/1:0,29:29:87.28:2005,87,0	0/0:23,0:23:69.24:0,69,2417	1/1:1,6:7:15.05:354,15,0
chr10	48129351	.	CGT	C	562.47	PASS	AB=0.966;AC=20;AF=0.385;AN=52;BaseQRankSum=8.913;DP=633;FS=5.543;HRun=0;HaplotypeScore=119.2300;InbreedingCoeff=-0.2092;MQ=67.11;MQ0=11;MQRankSum=-3.437;QD=1.55;ReadPosRankSum=-0.814;VQSLOD=1.9316;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:30,8:37:99:113,0,535	0/1:14,1:14:12.97:13,0,238	0/0:30,0:25:11.89:0,12,114	./.	1/1:17,0:17:2.37:8,2,0	0/0:19,1:20:14.14:0,14,622	0/0:29,2:31:1.74:0,2,651	0/0:43,0:42:31.15:0,31,387	0/0:35,1:37:35.83:0,36,953	0/1:21,0:21:72.13:72,0,134	0/1:16,0:15:0:0,0,0	0/1:16,0:16:4.82:5,0,92	0/1:18,0:18:26.68:27,0,139	0/1:15,1:16:19.14:60,0,19	0/1:25,2:27:44.89:45,0,653	0/0:12,0:17:27:0,27,267	0/1:24,0:22:18.69:19,0,36	0/0:22,0:22:0.23:0,0,21	0/0:17,0:17:3.08:0,3,79	0/0:14,0:13:10.93:0,11,168	0/1:38,1:39:94.71:95,0,217	1/1:10,0:10:2.04:6,2,0	./.	0/1:23,0:23:0.66:1,0,67	0/1:19,1:17:24.68:30,0,25	0/1:28,0:27:78.95:143,0,79	0/1:27,1:27:37.04:37,0,142	1/1:7,0:6:9.11:32,9,0
chr10	48129380	.	GTGTC	G	1944.17	PASS	AB=1.000;AC=36;AF=0.692;AN=52;BaseQRankSum=10.436;DP=636;FS=1.083;HRun=0;HaplotypeScore=146.0119;InbreedingCoeff=0.7456;MQ=51.75;MQ0=18;MQRankSum=-5.481;QD=4.66;ReadPosRankSum=-0.371;VQSLOD=2.6201;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:49:99:0,108,1444	0/0:15,0:14:21.04:0,21,375	./.	./.	1/1:17,0:18:2.92:28,3,0	0/0:26,0:26:60.10:0,60,1079	0/0:40,0:40:69.05:0,69,928	1/1:31,0:29:17.56:116,18,0	0/0:33,0:33:22.15:0,22,1106	1/1:22,0:22:32.50:234,32,0	0/1:15,0:13:0.02:0,0,0	1/1:16,0:15:2.92:21,3,0	1/1:16,0:16:14.73:108,15,0	1/1:21,0:21:8.80:68,9,0	0/0:23,0:23:41.27:0,41,693	0/0:20,0:20:47.76:0,48,668	1/1:31,0:29:4.17:20,4,0	1/1:24,0:24:2.58:27,3,0	1/1:11,10:21:26.83:253,27,0	1/1:4,13:17:5.76:92,6,0	1/1:20,31:50:9.02:123,9,0	1/1:13,0:12:3:28,3,0	0/1:19,0:18:0.01:0,0,0	1/1:18,0:18:10.11:83,10,0	1/1:15,0:11:9.01:90,9,0	1/1:28,0:27:35.06:245,35,0	1/1:9,18:26:24.44:366,24,0	1/1:11,0:11:26.92:222,27,0
chr10	48129382	.	GTCTGTCTGTC	G	4685.81	PASS	AB=0.686;AC=23;AF=0.426;AN=54;BaseQRankSum=9.313;DP=643;FS=0.927;HRun=0;HaplotypeScore=186.1029;InbreedingCoeff=0.6111;MQ=51.89;MQ0=18;MQRankSum=-3.908;QD=18.82;ReadPosRankSum=-0.631;VQSLOD=3.9796;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:50:99:0,126,4315	0/0:12,0:11:19.72:0,20,1005	0/0:9,0:4:5.03:0,5,72	./.	1/1:2,16:18:2.90:102,3,0	0/0:30,0:30:84.28:0,84,3215	0/0:39,0:41:39.28:0,39,2958	0/0:34,0:33:0.27:0,0,485	0/0:35,0:35:93.31:0,93,3435	1/1:4,19:23:26.17:1060,26,0	0/1:1,13:13:0.08:1,0,0	0/1:15,0:15:20.38:114,0,20	1/1:5,0:16:7.58:419,8,0	1/1:2,19:21:14.54:300,15,0	0/0:22,0:22:66.20:0,66,2074	0/0:20,0:20:54.12:0,54,1855	1/1:5,25:29:6.12:98,6,0	1/1:4,19:23:6.02:139,6,0	0/0:18,0:18:47.82:0,48,591	0/0:18,0:17:17.78:0,18,263	0/0:49,0:47:5.83:0,6,370	1/1:1,0:13:3.01:77,3,0	0/0:3,0:18:0:0,0,0	1/1:13,0:17:11.86:227,12,0	0/1:5,4:11:3.81:332,0,4	1/1:3,24:27:0.01:1138,0,0	0/0:27,0:26:35.89:0,36,586	1/1:8,2:11:30.07:678,30,0
chr10	48129386	.	GTCTGTCTGTC	G	2497.96	PASS	AB=1.000;AC=21;AF=0.389;AN=54;BaseQRankSum=11.282;DP=638;FS=13.823;HRun=0;HaplotypeScore=192.4498;InbreedingCoeff=0.4577;MQ=51.81;MQ0=18;MQRankSum=-5.610;QD=10.15;ReadPosRankSum=1.729;VQSLOD=1.6272;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:50:99:0,129,5197	0/0:12,0:11:27.05:0,27,1081	0/0:9,0:4:11.99:0,12,245	./.	1/1:18,0:18:2.90:69,3,0	0/0:32,0:32:90.30:0,90,3672	0/0:41,0:41:72.08:0,72,3421	0/0:33,0:31:1.42:0,1,983	0/0:33,0:33:93.32:0,93,3632	0/1:22,0:22:37.23:445,0,37	0/1:15,0:13:0.08:1,0,0	0/1:16,0:15:27.97:93,0,28	1/1:13,3:16:5.03:387,5,0	0/1:21,0:21:7.20:172,0,7	0/0:24,0:24:69.20:0,69,2458	0/0:21,0:21:57.16:0,57,2351	1/1:30,0:28:0.83:51,1,0	1/1:22,0:22:5.95:77,6,0	0/0:17,0:17:51.17:0,51,1075	0/0:17,0:16:14.81:0,15,310	0/0:45,0:43:27.04:0,27,498	1/1:14,0:13:3.01:73,3,0	0/0:19,0:18:0:0,0,0	1/1:17,2:19:14.87:268,15,0	1/1:15,0:11:3.81:163,4,0	0/1:27,0:26:69.66:450,0,70	0/0:26,0:25:35.93:0,36,623	1/1:10,1:10:27.05:417,27,0
chr10	48129394	.	GTC	G	669.67	PASS	AB=0.984;AC=18;AF=0.321;AN=56;BaseQRankSum=9.550;DP=635;FS=26.345;HRun=0;HaplotypeScore=130.7805;InbreedingCoeff=0.2701;MQ=54.99;MQ0=17;MQRankSum=-4.018;QD=2.52;ReadPosRankSum=2.813;VQSLOD=1.0299;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:52:99:0,141,2529	0/0:11,0:10:24.08:0,24,447	0/0:14,0:8:15.05:0,15,206	0/0:15,1:4:6.91:0,7,87	0/0:19,0:19:5.30:0,5,33	0/0:30,0:30:84.27:0,84,1538	0/0:37,0:37:82.37:0,82,1505	0/0:28,0:27:56.37:0,56,716	0/0:32,0:32:88.18:0,88,1563	0/1:19,0:19:99:119,0,136	0/1:14,0:13:0:0,0,0	1/1:3,12:14:2.90:36,3,0	1/1:15,0:15:19.79:181,20,0	0/1:20,0:20:5.05:26,0,5	0/0:22,0:22:66.21:0,66,1123	0/0:21,0:21:57.20:0,57,1069	0/1:31,0:29:11.39:56,0,11	0/1:21,0:20:0.39:14,0,0	0/0:19,0:19:40.78:0,41,459	0/0:20,0:19:10.63:0,11,188	0/0:47,0:45:21.80:0,22,313	1/1:14,0:13:2.92:17,3,0	0/1:17,2:18:0:0,0,0	1/1:23,0:23:18.75:146,19,0	0/1:13,1:11:35.09:35,0,43	0/1:26,0:25:99:143,0,214	0/1:24,0:23:13.28:13,0,57	0/1:11,0:10:37.91:45,0,38
chr10	48129950	.	T	TA	3163.50	PASS	AB=0.859;AC=34;AF=0.607;AN=56;BaseQRankSum=6.755;DP=651;FS=3.789;HRun=14;HaplotypeScore=114.8006;InbreedingCoeff=0.4543;MQ=67.98;MQ0=4;MQRankSum=-2.476;QD=6.48;ReadPosRankSum=-1.918;VQSLOD=2.3328;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:26:19.53:0,20,275	0/1:4,1:6:15.43:15,0,33	0/1:28,0:13:7.08:7,0,26	0/0:18,0:12:12.89:0,13,77	1/1:11,2:30:48.66:266,49,0	0/1:14,4:19:66.73:67,0,148	0/1:12,4:16:23.14:23,0,121	0/0:33,0:34:47.87:0,48,335	0/0:26,0:27:45.37:0,45,341	1/1:8,3:26:40.77:234,41,0	1/1:8,3:28:56.29:310,56,0	1/1:5,16:21:4.33:165,4,0	0/1:4,21:27:1.64:374,0,2	1/1:18,2:22:32.11:202,32,0	0/0:21,2:23:9.79:0,10,309	0/0:25,0:25:64.85:0,65,419	1/1:18,1:24:34.10:190,34,0	1/1:6,1:18:10.45:55,10,0	0/1:23,2:26:1.60:2,0,228	0/1:22,1:24:10.64:11,0,188	0/0:8,0:10:13.81:0,14,82	1/1:5,17:23:39.89:394,40,0	1/1:4,19:26:28.01:339,28,0	1/1:8,10:20:19.43:273,19,0	1/1:11,2:22:16.94:91,17,0	1/1:21,1:34:44.51:278,45,0	0/1:33,2:35:5.82:6,0,376	1/1:4,1:12:9.93:58,10,0
chr10	48131841	.	TTTC	T	445.46	PASS	AB=0.986;AC=21;AF=0.389;AN=54;BaseQRankSum=3.586;DP=354;FS=14.977;HRun=0;HaplotypeScore=44.5787;InbreedingCoeff=0.0451;MQ=34.62;MQ0=35;MQRankSum=-2.962;QD=1.80;ReadPosRankSum=2.155;VQSLOD=-0.5426;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:30,1:15:6.17:6,0,293	0/1:7,0:5:5.54:6,0,86	0/0:6,0:2:3:0,3,26	./.	0/1:11,1:12:6.71:24,0,7	0/0:19,0:15:15.60:0,16,380	0/0:13,0:8:14.61:0,15,154	0/1:27,0:15:12.42:55,0,12	0/1:5,0:4:10.96:11,0,47	1/1:20,1:15:29.94:152,30,0	0/1:12,1:12:24.62:25,0,28	0/0:16,0:12:15.11:0,15,146	0/0:7,0:6:14.90:0,15,191	1/1:6,1:6:8.94:73,9,0	0/0:13,0:12:20.21:0,20,277	1/1:7,0:3:2.37:8,2,0	1/1:13,0:10:9.85:55,10,0	0/1:11,0:7:5.75:6,0,31	0/1:20,0:10:7.47:29,0,7	0/0:11,0:9:6.77:0,7,96	0/1:10,0:6:0:0,0,0	0/0:2,0:2:4.55:0,5,29	0/0:5,0:5:5.90:0,6,55	0/1:15,0:9:3.97:4,0,110	0/1:18,0:17:21.69:46,0,22	0/1:16,0:12:6.04:100,0,6	0/1:15,0:11:1.93:2,0,43	0/0:10,0:7:5.91:0,6,47
chr10	48132066	.	AAC	A	2165.71	PASS	AB=0.868;AC=31;AF=0.574;AN=54;BaseQRankSum=4.410;DP=542;FS=0.654;HRun=0;HaplotypeScore=84.1161;InbreedingCoeff=0.2952;MQ=59.93;MQ0=9;MQRankSum=-0.690;QD=5.87;ReadPosRankSum=-0.745;VQSLOD=2.9535;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:33:47.62:48,0,330	0/1:10,3:12:45.43:45,0,165	0/1:21,0:12:0:0,0,0	0/0:35,0:21:9.93:0,10,104	1/1:14,12:25:17.90:200,18,0	0/1:16,0:18:10.24:10,0,136	0/0:16,0:16:32.82:0,33,395	0/0:15,0:21:2.76:0,3,36	0/1:13,3:16:36.65:37,0,332	1/1:6,7:13:21.06:232,21,0	1/1:11,15:25:15.04:166,15,0	0/0:13,0:15:18.15:0,18,156	0/0:4,0:10:11.99:0,12,125	1/1:8,13:21:24.06:266,24,0	0/1:18,0:18:39.45:39,0,255	0/1:11,0:11:12.51:65,0,13	1/1:11,20:30:41.94:448,42,0	0/1:5,9:14:17.27:94,0,17	1/1:11,0:16:5.68:28,6,0	1/1:5,0:16:13.08:58,13,0	./.	1/1:10,0:15:0.47:1,0,0	0/0:10,0:20:11.16:0,11,86	0/0:10,0:28:15:0,15,131	0/1:10,9:19:6.88:149,0,7	1/1:12,10:22:24.78:243,25,0	1/1:1,0:7:17.04:84,17,0	1/1:4,4:8:12.03:133,12,0
chr10	48132102	.	CAT	C	519.23	PASS	AB=0.994;AC=16;AF=0.286;AN=56;BaseQRankSum=9.822;DP=607;FS=11.245;HRun=0;HaplotypeScore=98.4153;InbreedingCoeff=-0.2240;MQ=54.72;MQ0=19;MQRankSum=1.632;QD=1.59;ReadPosRankSum=4.463;VQSLOD=0.6460;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:39,0:39:41.39:41,0,588	0/1:13,0:12:26.72:27,0,135	0/0:21,0:10:29.92:0,30,276	0/0:24,0:8:20.25:0,20,144	0/1:26,0:26:28.88:29,0,193	0/0:16,0:16:34.40:0,34,336	0/0:21,0:21:45.56:0,46,497	0/1:28,0:22:20.65:21,0,304	0/0:21,0:21:37.62:0,38,619	0/1:29,0:29:1.11:1,0,332	0/1:24,1:23:54.66:55,0,55	0/0:14,0:13:7.25:0,7,206	0/0:16,0:16:27.58:0,28,300	0/1:23,1:23:72.07:72,0,144	0/0:21,0:21:21.49:0,21,509	1/1:1,9:10:14.90:175,15,0	0/1:35,0:34:70.55:71,0,187	0/1:23,0:23:24.69:25,0,243	0/1:14,0:14:23.23:23,0,128	0/0:25,0:25:11.01:0,11,200	0/0:39,0:38:50.34:0,50,387	0/1:17,0:17:5.09:5,0,92	0/0:17,0:16:4.95:0,5,151	0/0:27,0:27:33.01:0,33,311	0/1:17,0:16:19.93:20,0,74	0/1:19,0:19:83.40:83,0,149	0/0:17,0:16:10.32:0,10,131	0/1:8,0:8:29.77:30,0,52
chr10	48133848	.	A	AGG	5421.13	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=2.593;DP=497;FS=23.752;HRun=7;HaplotypeScore=67.0061;InbreedingCoeff=0.9931;MQ=85.00;MQ0=0;MQRankSum=-2.136;QD=40.16;ReadPosRankSum=1.176;VQSLOD=3.3140;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,99,1135	0/0:9,0:9:24.07:0,24,279	0/0:23,0:24:62.51:0,63,627	0/0:13,0:13:32.91:0,33,354	1/1:0,12:12:33.11:537,33,0	0/0:17,0:17:48.13:0,48,547	0/0:20,0:20:54.15:0,54,619	0/0:29,0:29:66.13:0,66,747	0/0:22,0:21:60.15:0,60,678	1/1:2,14:16:39.13:639,39,0	1/1:0,16:16:45.15:738,45,0	0/0:16,0:16:42.11:0,42,489	0/0:19,0:19:51.10:0,51,579	1/1:1,12:13:33.11:539,33,0	0/0:18,0:18:51.15:0,51,594	0/0:15,0:15:42.11:0,42,477	1/1:2,11:13:33.11:539,33,0	1/1:2,14:17:45.15:736,45,0	0/0:23,0:23:57.12:0,57,640	0/0:6,0:6:18.05:0,18,210	0/0:20,0:20:60.13:0,60,664	0/0:13,0:13:30.06:0,30,337	0/0:13,0:13:27.07:0,27,314	0/0:25,0:25:63.14:0,63,719	1/1:1,15:16:33.11:540,33,0	1/1:7,20:28:63.19:984,63,0	0/0:24,0:24:66.19:0,66,769	1/1:1,3:4:12.01:169,12,0
chr10	48133990	.	CTCTTCCTCCTCCTCCTCCTCT	C	3102.25	PASS	AB=0.778;AC=28;AF=0.500;AN=56;BaseQRankSum=3.713;DP=435;FS=8.427;HRun=0;HaplotypeScore=211.3089;InbreedingCoeff=0.8211;MQ=68.04;MQ0=25;MQRankSum=-1.517;QD=18.47;ReadPosRankSum=-2.067;VQSLOD=1.4643;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:38:99:0,102,2926	0/0:5,0:5:15.02:0,15,201	0/0:17,0:10:14.21:0,14,179	0/0:28,0:22:49.32:0,49,533	1/1:9,0:7:15.02:235,15,0	0/0:18,0:17:50.94:0,51,1261	0/0:22,0:21:59.95:0,60,1775	0/1:17,0:16:65.92:127,0,66	0/0:19,0:18:42.73:0,43,926	1/1:8,0:7:21.03:228,21,0	1/1:6,0:6:18.01:209,18,0	0/0:12,0:11:29.69:0,30,1115	0/0:13,0:13:36.03:0,36,989	1/1:6,0:6:17.98:178,18,0	0/0:16,0:16:37.57:0,38,1063	0/1:1,0:5:24.33:43,0,24	1/1:8,0:7:16.95:190,17,0	1/1:8,0:6:14.47:148,14,0	1/1:15,0:14:23.80:228,24,0	1/1:11,0:12:32.76:255,33,0	1/1:42,0:38:16.81:438,17,0	0/0:19,0:17:38.80:0,39,957	0/0:17,0:16:44.76:0,45,1496	0/0:40,0:40:93.44:0,93,3408	1/1:3,8:10:6.02:256,6,0	1/1:8,0:8:18.03:221,18,0	1/1:7,0:5:12:226,12,0	1/1:6,0:6:18:343,18,0
chr10	48134008	.	CTCT	C	1484.07	PASS	AB=0.968;AC=32;AF=0.593;AN=54;BaseQRankSum=9.237;DP=395;FS=32.287;HRun=0;HaplotypeScore=75.7395;InbreedingCoeff=0.1839;MQ=48.63;MQ0=45;MQRankSum=1.800;QD=5.40;ReadPosRankSum=1.796;VQSLOD=0.5864;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:29:47.28:0,47,728	0/0:6,0:6:11.92:0,12,101	./.	0/1:7,0:2:7.30:7,0,26	1/1:11,0:5:1.07:64,1,0	0/0:17,0:15:32.95:0,33,449	0/0:24,0:20:45.81:0,46,578	0/1:24,0:18:34.11:34,0,154	0/0:18,0:17:33.19:0,33,361	1/1:6,0:5:11.86:86,12,0	1/1:2,0:2:5.99:50,6,0	0/1:14,0:13:37.03:54,0,37	0/1:18,0:18:34.51:35,0,48	1/1:4,0:3:8.93:67,9,0	0/0:18,0:17:22.55:0,23,470	1/1:12,0:11:17.99:182,18,0	1/1:8,0:6:8.80:53,9,0	0/1:9,0:6:11.02:52,0,11	0/1:15,0:14:50.18:70,0,50	1/1:6,3:9:8.78:51,9,0	1/1:38,0:34:37.17:333,37,0	0/1:20,1:17:5.23:84,0,5	0/1:11,0:10:40.43:40,0,113	0/1:36,0:36:99:124,0,243	1/1:9,0:8:5.25:23,5,0	1/1:8,0:8:17.93:146,18,0	0/1:5,3:6:4.73:33,0,5	1/1:4,1:3:8.99:77,9,0
chr10	48134011	.	TTCC	T	940.58	PASS	AB=1.000;AC=19;AF=0.380;AN=50;BaseQRankSum=3.825;DP=383;FS=9.315;HRun=0;HaplotypeScore=75.4932;InbreedingCoeff=0.5368;MQ=47.74;MQ0=47;MQRankSum=1.392;QD=5.37;ReadPosRankSum=4.454;VQSLOD=0.7402;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:21:42.14:0,42,750	0/0:4,0:4:6.02:0,6,79	./.	./.	0/0:11,0:5:2.45:0,2,26	0/0:15,0:13:21.07:0,21,381	0/0:25,0:21:26.32:0,26,469	0/0:26,0:20:18.43:0,18,199	0/0:16,0:15:18.68:0,19,284	0/0:7,0:6:2.97:0,3,29	./.	1/1:9,7:14:12.04:166,12,0	1/1:4,10:14:8.89:125,9,0	0/0:5,0:4:0.86:0,1,2	0/0:19,0:18:30:0,30,466	0/1:13,0:12:0.69:1,0,7	1/1:7,0:4:2.34:17,2,0	0/0:8,0:5:3.86:0,4,25	0/0:15,0:14:3.01:0,3,34	0/0:7,0:7:2.50:0,2,9	0/1:38,0:34:8.05:8,0,32	1/1:9,10:15:15.01:184,15,0	1/1:6,6:11:12.04:167,12,0	1/1:18,17:35:17.16:400,17,0	0/0:10,0:9:6.84:0,7,38	1/1:8,0:8:1.72:4,2,0	0/1:8,0:6:0.45:15,0,0	1/1:5,0:3:2.68:11,3,0
chr10	48134038	.	CTCT	C	1560.56	PASS	AB=1.000;AC=25;AF=0.446;AN=56;BaseQRankSum=3.038;DP=454;FS=8.659;HRun=0;HaplotypeScore=74.2024;InbreedingCoeff=0.4533;MQ=56.85;MQ0=44;MQRankSum=1.271;QD=6.94;ReadPosRankSum=-0.042;VQSLOD=1.2773;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:75.11:0,75,1276	0/0:4,0:4:11.77:0,12,121	0/0:29,0:7:11.99:0,12,108	0/0:29,0:12:16.90:0,17,159	1/1:18,0:12:1.22:185,1,0	0/0:12,0:10:30.02:0,30,540	0/0:25,0:22:50.05:0,50,834	0/1:25,0:18:4.57:5,0,327	0/0:15,0:15:41.62:0,42,558	1/1:10,0:9:15.49:143,15,0	1/1:0,3:3:2.97:20,3,0	0/1:19,0:18:18.12:18,0,191	0/1:18,0:18:13.30:13,0,146	1/1:11,0:10:23.43:180,23,0	0/0:15,0:14:36.09:0,36,640	0/0:15,0:13:33.60:0,34,278	1/1:13,0:10:29.33:221,29,0	1/1:10,0:8:16.20:125,16,0	0/0:13,0:10:23.84:0,24,233	0/0:9,0:9:18:0,18,161	0/0:36,0:29:38.19:0,38,429	0/1:17,0:15:39.29:39,0,118	0/1:10,0:9:38.06:38,0,55	0/1:25,0:25:99:118,0,107	1/1:16,0:15:35.72:288,36,0	1/1:2,13:14:32.85:264,33,0	0/1:8,0:7:5.10:5,0,91	1/1:5,1:5:13.17:95,13,0
chr10	48134139	.	TG	T	2984.96	PASS	AC=12;AF=0.222;AN=54;BaseQRankSum=9.960;DP=487;FS=7.857;HRun=7;HaplotypeScore=52.8068;InbreedingCoeff=0.9878;MQ=81.39;MQ0=0;MQRankSum=-3.383;QD=24.27;ReadPosRankSum=-0.816;VQSLOD=3.4475;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:81.22:0,81,990	0/0:8,0:8:21.07:0,21,264	0/0:16,0:16:25.80:0,26,334	0/0:17,0:16:18.91:0,19,208	0/0:17,0:17:45.14:0,45,557	0/0:13,0:13:30.09:0,30,364	0/0:20,0:20:60.18:0,60,744	1/1:1,19:20:54.12:551,54,0	0/0:25,0:25:72.23:0,72,903	0/0:11,0:11:30.04:0,30,359	0/0:7,0:7:21.07:0,21,264	0/0:19,0:19:54.16:0,54,665	0/0:12,0:12:24.08:0,24,302	0/0:7,0:7:21.07:0,21,264	0/0:15,0:14:39.12:0,39,479	1/1:1,13:14:33.07:337,33,0	0/0:34,0:34:99:0,99,1214	0/0:21,0:21:63.20:0,63,792	1/1:2,19:22:50.11:487,50,0	1/1:0,4:4:12.03:122,12,0	1/1:4,45:49:99:1244,123,0	0/0:13,0:13:27.09:0,27,340	0/0:7,0:7:21.05:0,21,251	0/0:29,0:29:84.24:0,84,1028	0/0:24,0:24:66.19:0,66,796	0/0:20,0:20:57.17:0,57,703	1/1:0,14:14:42.10:428,42,0	./.
chr10	48135180	.	ACCACCACCACCGCCGCCGCCGCCGCCG	A	5338.92	PASS	AB=0.833;AC=18;AF=0.346;AN=52;BaseQRankSum=4.401;DP=240;FS=14.569;HRun=0;HaplotypeScore=175.5580;InbreedingCoeff=0.6116;MQ=61.88;MQ0=1;MQRankSum=-6.843;QD=64.32;ReadPosRankSum=0.299;VQSLOD=3.3569;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:8:12.04:0,12,1129	0/0:1,0:1:3.01:0,3,75	0/1:9,0:9:20.06:20,0,69	0/0:16,0:15:10.24:0,10,170	1/1:4,3:7:12.93:458,13,0	0/0:13,0:13:26.88:0,27,1477	0/0:12,0:12:24.08:0,24,1845	0/0:8,0:8:3.01:0,3,60	0/0:9,0:9:18.04:0,18,571	1/1:6,2:8:18.06:658,18,0	1/1:2,1:3:3.01:172,3,0	0/0:7,0:7:18.03:0,18,894	0/0:17,0:17:40.88:0,41,1874	1/1:10,6:16:33.06:1398,33,0	0/0:6,0:6:13.29:0,13,709	0/0:6,0:6:12.04:0,12,287	1/1:15,3:18:4.17:819,4,0	1/1:7,1:8:18.03:520,18,0	./.	./.	0/0:10,0:10:5.87:0,6,39	0/0:4,0:4:3.01:0,3,370	0/0:8,0:8:3.01:0,3,35	0/0:26,0:25:66.23:0,66,5838	1/1:4,0:4:8.95:118,9,0	1/1:4,4:8:18.06:971,18,0	0/0:5,0:5:12.02:0,12,211	0/1:1,1:2:24.79:206,0,25
chr10	48135207	.	GCCACCA	G	596.79	PASS	AB=1.000;AC=14;AF=0.280;AN=50;BaseQRankSum=6.922;DP=210;FS=21.469;HRun=0;HaplotypeScore=81.4383;InbreedingCoeff=0.1052;MQ=50.84;MQ0=7;MQRankSum=-2.947;QD=6.63;ReadPosRankSum=0.132;VQSLOD=0.2039;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:20.95:0,21,424	0/0:3,0:3:3.01:0,3,50	0/0:3,0:1:3.01:0,3,56	0/0:8,0:2:3.01:0,3,44	0/1:6,0:6:5.89:6,0,25	0/0:12,0:11:18.06:0,18,501	0/0:21,0:21:57.11:0,57,1287	./.	0/0:3,0:3:9.03:0,9,241	0/1:9,0:9:19.80:20,0,242	0/1:5,0:5:0.60:1,0,45	0/0:7,0:7:17.97:0,18,317	0/0:9,0:9:21:0,21,466	0/1:10,0:10:66.05:66,0,79	0/0:6,0:5:9.02:0,9,164	0/0:3,0:3:5.69:0,6,52	0/1:14,0:13:15.61:16,0,280	0/1:9,0:9:7.04:7,0,236	1/1:3,3:4:8.97:116,9,0	./.	1/1:7,7:12:23.98:261,24,0	0/0:3,0:3:6.02:0,6,190	0/0:2,0:2:3.01:0,3,50	0/0:28,0:28:68.97:0,69,1575	./.	0/1:7,0:7:92.91:136,0,93	1/1:2,2:4:8.93:96,9,0	0/1:6,0:6:20.93:21,0,159
chr10	48135238	.	T	TCTC	8172.55	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=1.040;DP=360;FS=8.155;HRun=0;HaplotypeScore=78.6010;InbreedingCoeff=0.9591;MQ=63.76;MQ0=4;MQRankSum=-7.635;QD=39.67;ReadPosRankSum=-0.547;VQSLOD=5.2415;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:16:39.13:0,39,595	0/0:3,0:3:9:0,9,113	0/0:16,0:12:26.92:0,27,354	0/0:16,0:10:30.07:0,30,436	1/1:0,17:17:30.10:525,30,0	0/0:8,0:8:18.06:0,18,276	0/0:25,0:25:63.20:0,63,936	1/1:0,8:9:24.03:441,24,0	0/0:5,0:5:15.05:0,15,226	1/1:3,18:21:54.18:1120,54,0	1/1:1,9:10:15.05:292,15,0	0/0:10,0:10:30.10:0,30,458	0/0:10,0:10:30.10:0,30,456	1/1:1,21:25:45.47:904,45,0	0/0:7,0:7:21.07:0,21,320	1/1:0,8:8:11.89:255,12,0	1/1:2,25:27:56.98:1111,57,0	1/1:1,11:12:24.08:472,24,0	1/1:0,6:6:18.04:343,18,0	1/1:0,3:3:6.02:127,6,0	1/1:2,18:20:36.55:725,37,0	0/0:8,0:8:21.07:0,21,316	0/0:9,0:9:21.06:0,21,302	0/0:20,0:20:57.19:0,57,871	1/1:2,11:13:15.05:216,15,0	1/1:4,14:18:45.15:885,45,0	1/1:1,5:6:15.05:311,15,0	1/1:1,8:9:21.07:446,21,0
chr10	48135685	.	C	CTGTG	6157.01	PASS	AB=1.000;AC=36;AF=0.667;AN=54;BaseQRankSum=-0.952;DP=657;FS=2.732;HRun=0;HaplotypeScore=146.8483;InbreedingCoeff=0.6995;MQ=66.08;MQ0=8;MQRankSum=-0.604;QD=15.20;ReadPosRankSum=-1.497;VQSLOD=4.3442;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:63.21:0,63,1011	0/0:8,0:10:27.07:0,27,371	0/0:33,0:20:3.47:0,3,26	0/0:29,0:16:6.02:0,6,87	0/1:14,0:14:0:0,0,0	0/0:20,0:24:23.52:0,24,430	0/0:19,0:20:33.11:0,33,510	1/1:33,0:27:15.05:293,15,0	0/0:30,0:32:53.65:0,54,978	1/1:21,0:21:6.49:103,6,0	./.	1/1:6,17:26:47.90:1094,48,0	1/1:11,11:26:35.87:853,36,0	1/1:15,0:15:2.68:50,3,0	0/0:36,0:38:44.76:0,45,833	1/1:15,0:23:12.04:209,12,0	0/1:22,0:22:2.28:179,0,2	1/1:8,0:8:3.01:51,3,0	1/1:16,0:17:18.04:316,18,0	1/1:22,0:22:3.01:32,3,0	1/1:26,0:26:6.02:135,6,0	1/1:12,11:27:26.56:530,27,0	1/1:10,11:24:21.54:506,22,0	1/1:13,16:33:44.89:1023,45,0	1/1:12,0:12:3.01:51,3,0	1/1:26,0:25:33.11:535,33,0	1/1:17,0:17:5.98:97,6,0	1/1:11,0:11:6.02:102,6,0
chr10	48135691	.	G	GTGTGTGTGTGTGTGTGTA	8051.86	PASS	AB=0.903;AC=19;AF=0.352;AN=54;BaseQRankSum=-0.778;DP=696;FS=8.485;HRun=0;HaplotypeScore=290.6545;InbreedingCoeff=0.2889;MQ=60.32;MQ0=9;MQRankSum=-7.148;QD=26.40;ReadPosRankSum=-3.361;VQSLOD=1.9347;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:78.18:0,78,3045	0/0:12,0:12:33.09:0,33,1224	0/0:35,0:18:13.25:0,13,174	0/0:27,0:12:12.75:0,13,150	0/1:8,7:24:0.33:0,0,0	0/0:24,0:24:41.67:0,42,1277	0/0:21,0:21:39.10:0,39,1557	0/1:28,0:22:99:403,0,110	0/0:34,0:34:84.18:0,84,3115	1/1:12,10:39:51.12:1744,51,0	./.	0/0:26,0:26:11.57:0,12,714	0/0:27,0:27:36.59:0,37,603	1/1:3,10:23:2.35:251,2,0	0/0:41,0:41:65.79:0,66,2624	0/1:22,0:22:1.99:405,0,2	0/1:21,1:22:43.97:1446,0,44	1/1:3,5:12:3.01:256,3,0	0/1:15,0:14:15.64:338,0,16	0/1:22,0:22:1.01:1,0,35	0/1:26,0:26:24.46:98,0,24	0/0:24,0:23:25.95:0,26,419	0/0:24,0:24:32.99:0,33,426	0/0:31,0:31:53.85:0,54,772	1/1:5,6:20:3.01:255,3,0	1/1:25,0:24:41.87:2144,42,0	0/1:14,0:14:14.64:209,0,15	0/1:3,7:12:10.97:502,0,11
chr10	48135860	.	ACTACAT	A	5537.28	PASS	AB=1.000;AC=45;AF=0.865;AN=52;BaseQRankSum=-1.119;DP=511;FS=7.116;HRun=0;HaplotypeScore=121.4804;InbreedingCoeff=0.4988;MQ=40.49;MQ0=35;MQRankSum=1.244;QD=17.30;ReadPosRankSum=1.363;VQSLOD=3.7308;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:17:2.29:62,2,0	1/1:6,0:6:6.02:105,6,0	0/0:85,0:11:29.77:0,30,682	0/0:80,0:10:21.92:0,22,386	0/1:5,0:5:0.01:0,0,0	1/1:12,0:12:3.01:68,3,0	1/1:22,0:21:7.92:177,8,0	1/1:4,18:22:60.21:1416,60,0	1/1:15,0:15:21.04:439,21,0	1/1:6,8:14:29.83:463,30,0	0/1:8,0:8:0:0,0,0	1/1:16,0:16:14.64:315,15,0	1/1:10,0:10:20.50:397,21,0	1/1:9,0:9:2.80:13,3,0	1/1:10,19:29:13.48:96,13,0	0/1:13,0:13:0:0,0,0	1/1:12,0:12:10.37:302,10,0	1/1:1,10:11:6:97,6,0	1/1:7,0:7:17.88:292,18,0	./.	1/1:24,0:23:5.80:130,6,0	1/1:3,14:17:3.01:33,3,0	./.	1/1:15,0:15:2.83:39,3,0	1/1:7,0:6:6:89,6,0	1/1:13,0:13:36.06:571,36,0	1/1:10,0:10:15.05:301,15,0	1/1:6,0:5:6.18:132,6,0
chr10	48135861	.	CT	C	3364.89	PASS	AB=0.500;AC=45;AF=0.900;AN=50;BaseQRankSum=2.163;DP=490;FS=5.215;HRun=1;HaplotypeScore=110.1853;InbreedingCoeff=0.5338;MQ=40.55;MQ0=36;MQRankSum=1.358;QD=11.72;ReadPosRankSum=1.475;VQSLOD=2.1772;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,12:15:8.51:71,9,0	1/1:0,4:5:6:62,6,0	0/0:87,1:11:30.10:0,30,448	0/0:73,6:10:23.99:0,24,313	0/1:0,5:5:0:0,0,0	1/1:2,8:10:3:28,3,0	1/1:0,20:20:9.36:102,9,0	1/1:18,2:20:60.15:639,60,0	1/1:1,13:14:21.76:214,22,0	1/1:8,6:14:30.08:365,30,0	1/1:0,5:5:0.46:1,0,0	1/1:6,10:16:15.51:173,16,0	1/1:1,9:9:17.75:178,18,0	1/1:0,8:8:3.01:41,3,0	1/1:19,10:29:14.79:203,15,0	./.	1/1:3,9:12:13.92:138,14,0	1/1:10,1:11:5.95:59,6,0	1/1:1,6:7:18.04:217,18,0	./.	1/1:2,19:21:6.14:68,6,0	1/1:14,1:15:3:27,3,0	./.	1/1:3,9:12:2.90:36,3,0	1/1:0,6:6:6.01:67,6,0	1/1:1,12:13:35.78:428,36,0	1/1:1,9:10:15.03:159,15,0	1/1:0,5:5:8.84:89,9,0
chr10	48135863	.	ACAT	A	2711.43	PASS	AB=1.000;AC=45;AF=0.865;AN=52;BaseQRankSum=1.879;DP=494;FS=2.176;HRun=0;HaplotypeScore=114.8903;InbreedingCoeff=0.5347;MQ=37.30;MQ0=37;MQRankSum=1.619;QD=9.35;ReadPosRankSum=1.379;VQSLOD=2.8063;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:16:8.52:60,9,0	1/1:4,1:5:6.01:68,6,0	0/0:88,0:10:29.94:0,30,357	0/0:81,0:11:25.76:0,26,308	0/1:5,0:5:0:0,0,0	1/1:11,0:11:2.99:26,3,0	1/1:21,1:21:11.14:117,11,0	1/1:20,0:20:60.14:632,60,0	1/1:14,0:14:21.25:187,21,0	1/1:14,0:14:29.94:266,30,0	1/1:5,0:5:0.46:1,0,0	1/1:15,0:15:12.49:117,12,0	1/1:10,0:9:17.49:174,17,0	1/1:8,0:8:2.97:20,3,0	1/1:29,0:29:14.82:116,15,0	0/0:12,0:12:0:0,0,0	1/1:12,0:12:16.02:138,16,0	1/1:11,0:11:5.81:47,6,0	1/1:7,0:7:17.85:157,18,0	./.	1/1:24,0:23:5.87:48,6,0	1/1:14,1:15:3.01:36,3,0	./.	1/1:11,0:11:2.90:38,3,0	1/1:7,0:6:6:51,6,0	1/1:12,1:13:35.97:341,36,0	1/1:9,0:9:12.02:121,12,0	1/1:7,0:6:10.56:76,11,0
chr10	48135865	.	AT	A	3514.52	PASS	AB=0.732;AC=46;AF=0.920;AN=50;BaseQRankSum=1.332;DP=500;FS=2.131;HRun=1;HaplotypeScore=108.5229;InbreedingCoeff=0.3384;MQ=37.51;MQ0=37;MQRankSum=1.752;QD=9.35;ReadPosRankSum=1.165;VQSLOD=1.3581;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,10:17:11.98:113,12,0	1/1:3,3:6:6:60,6,0	0/0:85,4:10:29.76:0,30,313	0/1:79,3:12:10.76:11,0,254	0/1:0,5:5:0:0,0,0	1/1:0,10:10:3:29,3,0	1/1:3,19:21:12.37:140,12,0	1/1:18,2:20:60.14:638,60,0	1/1:1,13:14:21.83:218,22,0	1/1:8,6:14:30.08:362,30,0	1/1:0,5:5:0.46:1,0,0	1/1:6,9:15:12.51:148,13,0	1/1:1,9:9:17.75:178,18,0	1/1:0,8:8:3.01:41,3,0	1/1:19,10:29:14.79:203,15,0	./.	1/1:4,9:14:25.87:277,26,0	1/1:10,1:11:5.95:59,6,0	1/1:1,6:7:17.97:217,18,0	./.	1/1:0,25:24:3.13:30,3,0	1/1:15,0:15:3:26,3,0	./.	1/1:3,9:12:2.90:36,3,0	1/1:0,6:5:3.01:41,3,0	1/1:2,11:13:36.06:436,36,0	1/1:0,9:9:12.02:121,12,0	1/1:2,4:6:11.87:127,12,0
chr10	48138045	.	CTCTCTGTGTGTGTGTGTG	C	2752.32	PASS	AB=1.000;AC=10;AF=0.179;AN=56;BaseQRankSum=6.423;DP=512;FS=23.017;HRun=0;HaplotypeScore=237.8865;InbreedingCoeff=-0.0374;MQ=43.89;MQ0=19;MQRankSum=-6.892;QD=15.55;ReadPosRankSum=0.609;VQSLOD=1.2360;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:30:59.39:0,59,3601	0/0:6,0:5:9.03:0,9,650	0/0:1,0:1:3.01:0,3,44	0/0:6,0:3:9.03:0,9,119	0/0:21,0:21:27.09:0,27,544	0/0:16,0:16:27.09:0,27,1244	0/0:18,0:17:36.12:0,36,1139	0/0:26,0:26:35.71:0,36,388	0/0:19,0:16:39.13:0,39,1778	0/1:19,0:18:99:197,0,437	0/0:17,0:17:7.89:0,8,78	0/1:21,0:21:13.52:14,0,610	0/0:24,0:22:48.97:0,49,1682	0/1:16,0:15:67.60:68,0,203	0/0:21,0:21:42.14:0,42,1872	1/1:8,13:20:10.55:506,11,0	0/0:10,0:9:8.82:0,9,179	0/1:15,0:13:99:113,0,262	0/1:12,0:12:99:404,0,151	0/1:24,0:24:66.16:66,0,467	0/0:21,0:19:9.49:0,9,360	0/0:21,0:21:28.82:0,29,941	0/0:24,0:22:27.39:0,27,1118	0/0:28,0:27:47.70:0,48,1696	0/0:17,0:17:15.99:0,16,340	0/1:27,0:24:99:564,0,472	0/1:22,0:21:99:966,0,151	0/0:3,0:2:6.02:0,6,96
chr10	48138049	.	CTGTGTGTGTGTG	C	3670.99	PASS	AB=0.767;AC=16;AF=0.320;AN=50;BaseQRankSum=4.042;DP=509;FS=18.827;HRun=0;HaplotypeScore=209.6386;InbreedingCoeff=0.1993;MQ=44.35;MQ0=22;MQRankSum=-6.622;QD=15.49;ReadPosRankSum=-1.183;VQSLOD=1.2836;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:29:51.65:0,52,2560	0/0:4,0:3:9.03:0,9,442	./.	./.	0/0:16,0:20:11.84:0,12,78	0/0:17,0:17:24.08:0,24,863	0/0:22,0:21:38.92:0,39,1140	0/0:25,0:24:5.14:0,5,115	0/0:21,0:18:35.71:0,36,1159	0/1:9,10:20:6.25:606,0,6	0/0:10,4:15:0.94:0,1,2	0/1:19,0:21:99:108,0,164	0/0:25,0:23:13.36:0,13,717	0/1:9,8:17:8.65:95,0,9	0/0:20,0:20:27.56:0,28,1161	1/1:19,1:20:11.47:368,11,0	0/0:9,3:11:4.56:0,5,35	1/1:12,3:13:5.97:204,6,0	0/1:7,0:12:91.65:334,0,92	1/1:13,0:22:3.01:88,3,0	0/0:18,0:18:6.49:0,6,268	0/1:18,0:21:6.79:7,0,284	0/1:23,0:23:2.19:2,0,437	0/0:28,0:28:10.42:0,10,692	0/1:11,3:17:34.63:35,0,55	0/1:12,7:20:12.50:1003,0,12	1/1:9,0:20:30.10:821,30,0	./.
chr10	48140512	.	TTA	T	1425.35	PASS	AC=8;AF=0.174;AN=46;BaseQRankSum=0.726;DP=177;FS=4.629;HRun=0;HaplotypeScore=33.0855;InbreedingCoeff=0.7031;MQ=93.69;MQ0=3;MQRankSum=1.457;QD=29.69;ReadPosRankSum=-3.112;VQSLOD=3.5524;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:2,0:2:6.02:0,6,105	0/0:1,0:1:3.01:0,3,53	0/0:13,0:10:16.29:0,16,175	0/0:18,0:10:4.73:0,5,42	0/0:3,0:3:9.03:0,9,158	0/0:7,0:7:18.06:0,18,315	0/0:4,0:4:9.01:0,9,129	1/1:3,26:29:75.21:963,75,0	./.	0/0:4,0:4:12.04:0,12,210	0/0:5,0:5:12.04:0,12,196	0/0:4,0:4:12.03:0,12,169	0/0:4,0:4:12.03:0,12,172	0/0:2,0:2:6.02:0,6,105	0/0:3,0:3:9.03:0,9,158	1/1:0,2:2:3.01:41,3,0	0/0:15,0:15:45.15:0,45,789	0/0:20,0:20:54.17:0,54,908	1/1:0,7:7:21.07:279,21,0	./.	./.	./.	0/0:4,0:4:6.02:0,6,105	./.	0/0:5,0:5:15.05:0,15,249	0/0:4,0:4:12.04:0,12,196	1/1:1,9:10:21.07:283,21,0	0/0:8,0:8:18.06:0,18,315
chr10	48141935	.	CG	C	7778.89	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=14.629;DP=667;FS=15.490;HRun=3;HaplotypeScore=64.2978;InbreedingCoeff=0.9997;MQ=74.64;MQ0=0;MQRankSum=-0.929;QD=34.12;ReadPosRankSum=3.335;VQSLOD=3.8216;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,141,1989	0/0:9,0:9:27.09:0,27,388	0/0:21,0:21:60.13:0,60,772	0/0:18,0:17:45.01:0,45,588	1/1:0,32:32:87.27:1077,87,0	0/0:18,0:18:51.16:0,51,716	0/0:24,0:24:72.24:0,72,1034	0/0:29,0:29:84.27:0,84,1192	0/0:23,0:23:66.22:0,66,937	1/1:1,26:27:78.24:955,78,0	1/1:0,23:23:69.22:855,69,0	0/0:21,0:21:63.19:0,63,884	0/0:25,0:25:75.22:0,75,1025	1/1:0,31:31:84.26:1041,84,0	0/0:14,0:14:39.12:0,39,542	0/0:22,0:22:66.20:0,66,914	1/1:1,32:33:87.27:1078,87,0	1/1:1,18:19:51.16:632,51,0	0/0:21,0:21:63.21:0,63,904	0/0:15,0:15:45.13:0,45,627	0/0:36,0:36:99:0,108,1495	0/0:20,0:20:57.14:0,57,779	0/0:24,0:24:66.16:0,66,876	0/0:21,0:21:63.21:0,63,900	1/1:1,29:30:75.24:929,75,0	1/1:0,23:23:69.20:841,69,0	0/0:29,0:29:87.29:0,87,1250	1/1:0,10:10:30.09:372,30,0
chr10	48142873	.	TGG	T	2417.47	PASS	AB=0.778;AC=29;AF=0.518;AN=56;BaseQRankSum=9.385;DP=571;FS=158.369;HRun=2;HaplotypeScore=108.7847;InbreedingCoeff=0.8256;MQ=57.85;MQ0=17;MQRankSum=-4.100;QD=7.95;ReadPosRankSum=-0.598;VQSLOD=-0.6176;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:17:36.44:0,36,556	0/0:11,0:11:26.29:0,26,363	0/0:35,1:11:14.84:0,15,285	0/0:37,0:11:14.29:0,14,139	1/1:22,1:23:5.31:275,5,0	0/0:15,0:14:37.92:0,38,498	0/0:16,0:16:45.05:0,45,584	1/1:26,3:27:17.67:223,18,0	0/0:18,1:19:51.93:0,52,699	1/1:25,4:28:21.67:131,22,0	1/1:21,0:21:14.09:105,14,0	0/0:18,1:18:27.07:0,27,495	0/0:16,0:14:25.17:0,25,413	1/1:12,2:15:11.74:146,12,0	0/0:13,0:13:37.62:0,38,406	1/1:18,1:18:38.59:227,39,0	1/1:23,2:26:1.68:199,2,0	0/1:15,4:20:20.22:220,0,20	1/1:17,0:16:16.85:73,17,0	1/1:18,0:18:1.77:104,2,0	1/1:7,0:6:7.92:45,8,0	0/0:18,2:18:36.73:0,37,525	0/0:23,0:23:56.51:0,57,743	0/0:22,0:22:45.77:0,46,583	1/1:16,1:17:20.94:202,21,0	1/1:24,1:25:14.25:143,14,0	1/1:12,2:16:24.24:260,24,0	1/1:12,6:19:18.86:281,19,0
chr10	48142874	.	GGT	G	6130.02	PASS	AB=0.974;AC=31;AF=0.554;AN=56;BaseQRankSum=2.875;DP=575;FS=12.935;HRun=0;HaplotypeScore=96.2172;InbreedingCoeff=0.9127;MQ=56.87;MQ0=17;MQRankSum=-2.353;QD=17.72;ReadPosRankSum=-1.397;VQSLOD=3.8749;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:17:37.33:0,37,511	0/0:11,0:11:25.52:0,26,270	0/0:36,0:10:17.04:0,17,178	0/1:37,1:11:7.87:8,0,49	1/1:13,3:22:50.54:515,51,0	0/0:15,0:14:38.06:0,38,426	0/0:17,0:17:44.66:0,45,453	1/1:25,0:27:65.15:529,65,0	0/0:19,0:19:53.83:0,54,592	1/1:26,2:29:66.45:633,66,0	1/1:6,13:22:40.13:353,40,0	0/0:19,0:18:21.97:0,22,340	0/0:16,1:15:4.56:0,5,287	1/1:14,1:15:30.20:270,30,0	0/0:13,0:13:23.25:0,23,335	1/1:11,1:18:53.83:480,54,0	1/1:26,0:27:48.58:462,49,0	1/1:18,0:18:33.09:298,33,0	1/1:2,0:16:44.86:371,45,0	1/1:17,1:19:26.13:376,26,0	1/1:5,0:6:14.79:127,15,0	0/0:20,0:18:19.80:0,20,328	0/0:22,0:22:57.38:0,57,482	0/0:22,0:22:32.91:0,33,408	1/1:16,0:19:21.65:337,22,0	1/1:5,21:26:62.61:531,63,0	1/1:12,0:16:46.58:410,47,0	1/1:16,1:19:30.59:430,31,0
chr10	48144876	.	C	CACAGTTGT	6922.87	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=0.153;DP=432;FS=24.519;HRun=0;HaplotypeScore=140.1128;InbreedingCoeff=0.9170;MQ=65.78;MQ0=5;MQRankSum=-8.287;QD=51.28;ReadPosRankSum=-2.269;VQSLOD=2.7865;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:72.18:0,72,1761	0/0:8,0:8:21.07:0,21,535	0/0:20,0:13:22.79:0,23,413	0/0:19,0:11:10.18:0,10,254	0/0:16,0:16:9.03:0,9,244	0/0:9,0:9:16.29:0,16,325	0/0:15,0:15:36.11:0,36,905	1/1:22,10:31:63.11:1706,63,0	0/0:14,0:13:27.04:0,27,563	0/0:16,0:16:30.10:0,30,801	0/0:11,0:11:27.09:0,27,629	0/0:11,0:11:18.06:0,18,473	0/0:7,0:7:12.04:0,12,329	0/0:8,0:8:11.97:0,12,143	0/0:13,0:12:33.07:0,33,824	1/1:7,4:11:24.08:825,24,0	0/0:21,0:21:45.05:0,45,988	0/0:11,0:10:21.07:0,21,559	1/1:19,10:29:66.04:1921,66,0	1/1:18,7:25:36.12:942,36,0	1/1:16,1:16:12.04:219,12,0	0/0:6,0:6:15.05:0,15,399	0/0:12,0:12:15.05:0,15,399	0/0:8,0:8:9.50:0,10,231	0/0:12,0:12:21.06:0,21,508	0/0:25,0:25:51.18:0,51,1345	1/1:20,1:21:45.15:1310,45,0	0/0:2,0:2:6.02:0,6,162
chr10	48145056	.	AACAC	A	1889.17	PASS	AB=0.684;AC=23;AF=0.442;AN=52;BaseQRankSum=-1.997;DP=507;FS=1.357;HRun=0;HaplotypeScore=116.8435;InbreedingCoeff=0.3774;MQ=64.66;MQ0=11;MQRankSum=-0.872;QD=7.84;ReadPosRankSum=1.375;VQSLOD=2.7163;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:21:26.99:0,27,327	0/0:2,0:6:6.02:0,6,123	./.	./.	1/1:11,3:16:11.51:129,12,0	0/0:11,0:12:8.80:0,9,105	0/0:23,0:33:38.69:0,39,683	1/1:12,0:11:3:26,3,0	0/0:13,0:22:15.05:0,15,300	1/1:11,11:22:20:352,20,0	0/1:8,3:12:28.34:82,0,28	0/0:7,1:11:13.20:0,13,56	0/1:10,1:16:24.85:25,0,65	1/1:5,5:11:6.01:77,6,0	0/0:13,0:23:31.96:0,32,598	1/1:8,9:18:8.54:226,9,0	1/1:17,12:28:35.14:501,35,0	1/1:14,3:16:14.99:207,15,0	0/0:15,0:16:12.02:0,12,173	0/0:12,0:16:11.81:0,12,156	0/0:27,0:36:21.05:0,21,333	0/1:4,4:10:22.98:36,0,23	0/1:6,2:14:60.37:69,0,60	0/1:9,0:19:1.87:2,0,73	0/1:7,0:19:11.95:47,0,12	0/1:11,2:14:21.76:152,0,22	0/0:9,0:21:23.89:0,24,320	1/1:2,5:7:9.03:141,9,0
chr10	48145462	.	T	TA	3884.59	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-10.789;DP=669;FS=1.950;HRun=3;HaplotypeScore=69.3324;InbreedingCoeff=0.9985;MQ=88.21;MQ0=0;MQRankSum=1.834;QD=38.85;ReadPosRankSum=0.226;VQSLOD=3.6569;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,126,1561	0/0:7,0:7:21.07:0,21,260	0/0:34,0:34:86.45:0,86,1032	0/0:21,0:21:54.16:0,54,657	0/0:27,0:27:78.25:0,78,966	0/0:21,0:21:57.18:0,57,706	0/0:20,0:20:60.17:0,60,730	0/0:32,0:32:90.25:0,90,1098	0/0:25,0:25:72.21:0,72,880	0/0:22,0:21:60.19:0,60,744	0/0:21,0:21:54.17:0,54,669	0/0:16,0:16:42.12:0,42,508	0/0:27,0:27:78.25:0,78,966	0/0:26,0:26:75.24:0,75,929	0/0:26,0:26:75.24:0,75,928	0/0:19,0:19:48.13:0,48,594	0/0:27,0:27:75.22:0,75,916	0/0:10,0:10:27.08:0,27,334	1/1:1,22:23:66.22:948,66,0	1/1:0,14:14:39.13:561,39,0	1/1:0,41:41:99:1512,105,0	0/0:29,0:29:87.25:0,87,1054	0/0:25,0:25:72.23:0,72,890	0/0:28,0:28:81.25:0,81,997	0/0:14,0:14:42.13:0,42,520	0/0:35,0:35:99:0,102,1261	1/1:1,21:22:60.01:864,60,0	0/0:13,0:13:39.12:0,39,483
chr10	48145701	.	CTCTT	C	2796.17	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=3.091;DP=384;FS=6.211;HRun=0;HaplotypeScore=70.3366;InbreedingCoeff=0.8556;MQ=36.01;MQ0=26;MQRankSum=-2.767;QD=21.34;ReadPosRankSum=-0.490;VQSLOD=2.5385;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:50.89:0,51,972	0/0:5,0:5:15.05:0,15,301	0/0:64,0:11:1.89:0,2,208	0/0:65,0:17:23.18:0,23,383	1/1:7,2:9:8.91:66,9,0	0/0:12,0:12:30.10:0,30,599	0/0:13,0:13:33.03:0,33,595	1/1:16,0:13:29.81:273,30,0	0/0:10,0:10:30.06:0,30,654	1/1:7,5:10:27.05:424,27,0	1/1:7,2:9:15.02:234,15,0	0/0:6,0:6:12.03:0,12,222	0/0:13,0:13:33.10:0,33,651	1/1:1,1:1:3.01:57,3,0	0/0:11,0:11:30.02:0,30,635	1/1:1,7:8:14.92:242,15,0	1/1:1,6:7:6.02:114,6,0	0/0:2,0:2:1.55:0,2,4	1/1:10,0:10:24.46:278,24,0	1/1:5,2:6:11.70:159,12,0	1/1:11,2:11:11.44:134,11,0	0/0:9,0:8:23.98:0,24,315	0/0:9,0:9:21.03:0,21,366	0/0:10,0:10:27.04:0,27,512	1/1:0,8:8:15.05:260,15,0	1/1:10,6:15:40.63:526,41,0	1/1:2,3:5:8.98:131,9,0	1/1:1,8:8:6.02:114,6,0
chr10	48145703	.	CTT	C	1353.94	PASS	AB=0.984;AC=30;AF=0.536;AN=56;BaseQRankSum=6.682;DP=381;FS=7.285;HRun=3;HaplotypeScore=68.4471;InbreedingCoeff=0.7962;MQ=38.69;MQ0=26;MQRankSum=-4.094;QD=6.94;ReadPosRankSum=-1.265;VQSLOD=-0.6590;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:50.89:0,51,780	0/0:5,0:5:15.03:0,15,243	0/1:60,2:11:44.75:45,0,203	0/0:63,0:17:12.24:0,12,308	1/1:8,0:8:8.68:66,9,0	0/0:13,0:13:33.10:0,33,597	0/0:14,0:14:33.04:0,33,558	1/1:15,1:13:29.70:217,30,0	0/0:10,0:10:30.04:0,30,477	1/1:13,0:11:28.33:202,28,0	1/1:9,0:9:14.78:96,15,0	0/0:7,0:7:15.03:0,15,226	0/0:13,0:13:33.10:0,33,601	1/1:2,0:1:2.98:21,3,0	0/0:10,0:10:30.01:0,30,471	1/1:7,1:8:14.91:119,15,0	1/1:7,0:7:5.95:42,6,0	0/1:2,0:2:0:0,0,0	1/1:8,2:10:21.78:165,22,0	1/1:7,0:6:11.52:87,12,0	1/1:13,0:11:5.93:47,6,0	0/0:9,0:8:23.98:0,24,325	0/0:9,0:9:21.02:0,21,326	0/0:10,0:10:27:0,27,405	1/1:8,0:8:12.34:82,12,0	1/1:16,0:15:24.83:275,25,0	1/1:5,0:5:8.89:59,9,0	1/1:9,0:8:5.95:42,6,0
chr10	48147882	.	C	CACCAA	19405.23	PASS	AB=0.933;AC=31;AF=0.554;AN=56;BaseQRankSum=-0.296;DP=745;FS=1.908;HRun=0;HaplotypeScore=141.2126;InbreedingCoeff=0.9252;MQ=70.17;MQ0=3;MQRankSum=-6.931;QD=43.32;ReadPosRankSum=-2.440;VQSLOD=4.7147;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:63.20:0,63,1163	0/0:19,0:19:48.07:0,48,838	0/0:27,0:25:44.06:0,44,717	0/0:32,0:25:29.15:0,29,500	1/1:6,36:49:99:2189,108,0	0/0:21,0:21:54.14:0,54,934	0/0:24,0:24:48.13:0,48,814	1/1:11,11:32:51.84:1355,52,0	0/0:32,0:32:66.22:0,66,1222	1/1:9,22:33:72.18:1630,72,0	1/1:6,20:28:50.97:1236,51,0	0/0:22,0:22:54.12:0,54,930	0/1:13,1:14:63.32:63,0,377	1/1:6,13:19:36.08:976,36,0	0/0:17,0:17:39.12:0,39,711	1/1:5,13:18:30.10:874,30,0	1/1:5,16:22:32.98:822,33,0	1/1:10,16:25:30.06:792,30,0	1/1:9,11:21:39.09:918,39,0	1/1:5,32:37:93.04:2267,93,0	1/1:9,24:36:51.13:1418,51,0	0/0:27,0:27:69.20:0,69,1238	0/0:21,0:21:40.37:0,40,766	0/0:30,0:30:69.21:0,69,1283	1/1:7,23:33:39:932,39,0	1/1:6,26:36:87.22:2059,87,0	1/1:3,20:24:50.98:1438,51,0	1/1:6,9:17:15.05:436,15,0
chr10	48148772	.	CAGAGAG	C	484.41	PASS	AC=6;AF=0.115;AN=52;BaseQRankSum=-0.814;DP=602;FS=14.529;HRun=0;HaplotypeScore=160.0049;InbreedingCoeff=0.6646;MQ=65.42;MQ0=25;MQRankSum=-3.106;QD=12.75;ReadPosRankSum=0.227;VQSLOD=2.2010;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:28:15.05:0,15,369	1/1:8,2:10:2.84:14,3,0	./.	./.	0/0:24,0:23:21.07:0,21,457	0/0:18,0:18:23.22:0,23,632	0/0:19,0:19:12.04:0,12,361	0/0:18,0:18:3.01:0,3,36	1/1:9,4:14:15.52:289,16,0	0/0:21,0:20:36.12:0,36,750	0/0:13,0:12:11.64:0,12,298	0/0:7,0:7:2.04:0,2,6	0/0:14,0:15:13.90:0,14,360	0/0:9,0:9:9.03:0,9,208	1/1:10,3:14:18.06:305,18,0	0/0:16,0:17:12.04:0,12,324	0/0:29,0:30:27.09:0,27,730	0/0:17,0:16:15.05:0,15,368	0/0:18,0:16:15.05:0,15,371	0/0:14,0:13:3.01:0,3,82	0/0:17,0:14:9.01:0,9,113	0/0:13,0:13:9.03:0,9,166	0/0:20,0:20:12.04:0,12,281	0/0:22,0:22:14.72:0,15,323	0/0:20,0:21:26.48:0,26,689	0/0:21,0:21:33.08:0,33,718	0/0:25,0:23:36.58:0,37,752	0/0:12,0:12:12.03:0,12,264
chr10	48148821	.	A	AGT	301.12	PASS	AB=0.957;AC=8;AF=0.148;AN=54;BaseQRankSum=6.365;DP=493;FS=8.648;HRun=0;HaplotypeScore=101.9391;InbreedingCoeff=0.5775;MQ=64.44;MQ0=9;MQRankSum=0.159;QD=4.63;ReadPosRankSum=-0.022;VQSLOD=1.4932;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:27:53.95:0,54,487	0/0:8,0:8:17.93:0,18,144	0/0:18,0:13:35.92:0,36,357	0/0:21,0:12:12.50:0,12,291	0/0:20,0:19:16.85:0,17,172	0/0:25,0:24:54:0,54,550	0/0:15,0:15:39.47:0,39,371	0/0:11,0:11:32.51:0,33,209	0/0:16,0:16:38.87:0,39,311	0/0:27,0:27:25.04:0,25,337	0/0:13,0:13:25.79:0,26,168	./.	1/1:14,1:15:12.85:128,13,0	0/0:12,0:12:22.99:0,23,165	0/0:16,0:16:44.46:0,44,376	0/0:12,0:12:23.50:0,23,179	0/0:37,0:36:11.84:0,12,330	0/0:15,0:14:29.37:0,29,191	0/0:17,0:17:32.37:0,32,184	0/0:15,0:14:26.71:0,27,182	0/0:15,0:13:20.69:0,21,135	1/1:2,7:10:2.92:114,3,0	1/1:12,1:13:6.20:68,6,0	0/1:19,2:21:30.66:99,0,31	0/0:31,0:31:47.36:0,47,375	0/0:23,0:23:26.39:0,26,260	0/0:23,0:23:40.62:0,41,310	0/1:6,0:6:26.41:26,0,42
chr10	48148823	.	A	AGTGT	2114.08	PASS	AB=0.871;AC=30;AF=0.536;AN=56;BaseQRankSum=3.986;DP=498;FS=7.125;HRun=0;HaplotypeScore=123.2197;InbreedingCoeff=0.3098;MQ=65.71;MQ0=7;MQRankSum=-2.621;QD=6.02;ReadPosRankSum=-0.755;VQSLOD=1.6549;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:41.90:0,42,873	0/0:8,0:8:17.96:0,18,285	0/0:19,0:14:35.99:0,36,581	0/0:22,0:13:35.48:0,35,583	0/1:18,0:19:2.88:96,0,3	0/0:23,0:22:57.16:0,57,904	0/0:14,0:14:33.11:0,33,571	0/1:12,0:12:5.05:18,0,5	0/0:16,0:16:39.12:0,39,573	0/1:22,0:23:65.60:78,0,66	0/1:13,0:14:17.62:18,0,55	0/1:2,9:11:0:0,0,0	1/1:2,12:14:16.34:360,16,0	1/1:11,0:12:7.42:59,7,0	0/0:16,0:16:45.14:0,45,708	0/1:10,0:11:6.04:6,0,19	0/1:32,0:36:7.34:300,0,7	1/1:17,0:17:9.97:120,10,0	0/1:4,0:21:3.77:295,0,4	1/1:15,0:14:3.12:13,3,0	1/1:15,0:13:1.14:7,1,0	1/1:11,0:11:10.75:164,11,0	1/1:4,9:14:5.72:122,6,0	1/1:4,0:20:6.02:94,6,0	0/1:32,0:34:52.77:148,0,53	1/1:20,0:22:9.38:208,9,0	1/1:22,0:23:6.04:120,6,0	0/1:6,0:6:5.78:67,0,6
chr10	48148904	.	AT	A	3759.06	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=10.555;DP=403;FS=4.401;HRun=8;HaplotypeScore=51.9304;InbreedingCoeff=0.9287;MQ=61.41;MQ0=2;MQRankSum=0.333;QD=21.60;ReadPosRankSum=4.208;VQSLOD=3.7984;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:36:99:0,102,1229	0/0:10,0:10:24.07:0,24,289	0/0:8,0:5:11.61:0,12,104	0/0:6,0:4:12.02:0,12,125	1/1:1,27:26:60.10:579,60,0	0/0:11,0:11:33.08:0,33,374	0/0:14,0:14:42.13:0,42,506	0/0:22,0:22:45.10:0,45,527	0/0:8,0:8:21.01:0,21,227	1/1:3,24:26:69.09:660,69,0	1/1:1,7:8:15.02:145,15,0	0/0:5,0:5:9.03:0,9,108	0/0:7,0:7:18.06:0,18,217	1/1:1,3:4:3:29,3,0	0/0:9,0:9:21.06:0,21,253	0/0:9,0:9:24.07:0,24,288	1/1:2,25:27:54.09:521,54,0	1/1:3,14:17:42.06:405,42,0	0/0:22,0:20:57.13:0,57,670	0/0:13,0:13:33.10:0,33,399	0/0:10,0:9:21.06:0,21,253	0/0:3,0:3:6.02:0,6,72	0/0:10,0:10:24.07:0,24,290	0/0:8,0:8:18.06:0,18,217	1/1:3,33:36:81.13:782,81,0	1/1:3,15:18:45.07:435,45,0	0/0:17,0:16:45.14:0,45,542	1/1:0,9:7:21.03:203,21,0
chr10	48150122	.	G	GT	7588.52	PASS	AB=0.824;AC=29;AF=0.518;AN=56;BaseQRankSum=-13.387;DP=659;FS=0.325;HRun=10;HaplotypeScore=81.7299;InbreedingCoeff=0.5064;MQ=67.97;MQ0=2;MQRankSum=-1.243;QD=17.90;ReadPosRankSum=1.379;VQSLOD=5.4375;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:92.31:0,92,739	0/0:9,0:9:26.97:0,27,222	0/1:18,0:14:12.36:12,0,52	0/0:19,0:13:2.93:0,3,54	1/1:5,36:40:99:1030,99,0	0/0:31,0:31:80.89:0,81,665	0/0:19,0:19:44.93:0,45,369	0/0:32,0:32:56.98:0,57,277	0/0:14,0:14:31.49:0,31,268	1/1:7,24:31:66.15:694,66,0	1/1:1,25:27:66.83:702,67,0	1/1:1,17:18:48.12:511,48,0	1/1:4,11:16:35.92:366,36,0	1/1:2,17:19:48.12:511,48,0	0/0:23,0:23:65.89:0,66,538	0/0:21,0:21:24.88:0,25,64	1/1:6,17:23:22.14:508,22,0	0/1:9,19:28:13.81:471,0,14	0/1:35,0:34:27.42:27,0,161	0/1:25,0:25:11.96:12,0,176	0/1:12,0:12:9.78:10,0,85	1/1:10,22:32:14.45:559,14,0	0/1:6,18:24:10.78:508,0,11	1/1:5,11:16:8.44:295,8,0	1/1:4,20:24:17.67:562,18,0	1/1:4,20:24:60.15:639,60,0	0/0:30,0:30:65:0,65,342	0/1:3,6:9:3.59:171,0,4
chr10	48151539	.	C	CCTGCATCT	17369.82	PASS	AB=0.575;AC=29;AF=0.518;AN=56;BaseQRankSum=-8.420;DP=609;FS=2.600;HRun=0;HaplotypeScore=158.0545;InbreedingCoeff=0.8992;MQ=79.65;MQ0=0;MQRankSum=-14.787;QD=56.03;ReadPosRankSum=-3.118;VQSLOD=4.2639;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:84.29:0,84,2116	0/0:8,0:8:18.06:0,18,479	0/0:21,0:21:42.04:0,42,939	0/0:20,0:20:21.60:0,22,589	1/1:15,0:15:5.21:233,5,0	0/0:16,0:16:42.14:0,42,1079	0/0:39,0:39:99:0,99,2458	1/1:14,13:29:66.22:1961,66,0	0/0:25,0:25:72.24:0,72,1836	1/1:15,0:15:39:1288,39,0	1/1:14,0:14:9.03:341,9,0	0/0:29,0:29:75.26:0,75,1881	0/0:26,0:26:66.23:0,66,1720	1/1:32,0:32:63.22:2212,63,0	0/0:19,0:19:51.17:0,51,1245	0/1:6,17:23:34.64:1579,0,35	1/1:23,0:23:24.08:857,24,0	1/1:19,0:19:33.11:1231,33,0	1/1:11,7:19:30.10:846,30,0	1/1:6,12:18:21.07:854,21,0	1/1:13,13:29:18.06:637,18,0	0/0:12,0:12:30.10:0,30,748	0/0:19,0:19:42.14:0,42,1088	0/0:30,0:30:78.27:0,78,1999	1/1:20,0:20:48.16:1608,48,0	1/1:24,0:24:48.06:1618,48,0	1/1:7,13:21:36.12:1433,36,0	1/1:9,0:9:18.06:673,18,0
chr10	48151544	.	A	ATCTCTGCG	19027.05	PASS	AB=1.000;AC=27;AF=0.482;AN=56;BaseQRankSum=-7.432;DP=655;FS=2.957;HRun=0;HaplotypeScore=166.7456;InbreedingCoeff=0.7936;MQ=76.20;MQ0=0;MQRankSum=-15.057;QD=54.36;ReadPosRankSum=-1.532;VQSLOD=4.6054;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,102,2335	0/0:7,0:7:18.06:0,18,491	0/0:20,0:20:42.06:0,42,1036	0/0:18,0:18:24.41:0,24,601	1/1:2,12:19:5.41:257,5,0	0/0:16,0:16:45.14:0,45,1162	0/0:42,0:42:99:0,111,2612	1/1:27,0:27:25.08:1680,25,0	0/0:27,0:27:78.24:0,78,1948	1/1:0,15:24:57.04:1946,57,0	1/1:4,9:18:9.03:388,9,0	0/0:30,0:30:81.25:0,81,1974	0/0:26,0:26:69.22:0,69,1779	1/1:9,24:38:63.22:2520,63,0	0/0:19,0:19:54.17:0,54,1297	0/1:21,0:21:77.65:1394,0,78	1/1:5,13:24:30.10:1240,30,0	1/1:4,15:26:33.11:1423,33,0	0/1:19,0:19:12.98:627,0,13	1/1:16,0:16:21.07:727,21,0	0/1:29,0:29:0.92:612,0,1	0/0:14,0:14:38.83:0,39,861	0/0:17,0:17:42.14:0,42,1126	0/0:29,0:29:78.27:0,78,2061	1/1:1,20:23:48.16:1830,48,0	1/1:4,18:31:65.96:2371,66,0	1/1:22,0:23:36.12:1236,36,0	1/1:0,8:12:18.06:777,18,0
chr10	48153202	.	T	TGCGCGC	863.25	PASS	AB=1.000;AC=8;AF=0.148;AN=54;BaseQRankSum=-1.787;DP=507;FS=0.000;HRun=0;HaplotypeScore=151.5757;InbreedingCoeff=0.5803;MQ=62.09;MQ0=8;MQRankSum=-3.618;QD=9.70;ReadPosRankSum=-3.108;VQSLOD=2.1256;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:87.26:0,87,1798	0/0:4,0:4:12.04:0,12,229	0/0:20,0:9:8.59:0,9,52	0/0:16,0:10:5.97:0,6,70	0/0:15,0:15:16.80:0,17,186	0/0:20,0:20:54.17:0,54,1146	0/0:29,0:29:69.17:0,69,1347	0/0:12,0:12:24.04:0,24,248	0/0:17,0:17:48.16:0,48,1050	0/0:20,0:20:41.48:0,41,693	0/0:18,0:18:32.97:0,33,570	0/0:18,0:18:27.07:0,27,350	0/0:17,0:17:18.06:0,18,245	0/0:18,0:18:26.61:0,27,407	0/0:15,0:15:42.14:0,42,953	0/1:17,0:17:20.90:21,0,278	0/0:29,0:29:34.21:0,34,584	0/0:29,0:29:68.30:0,68,829	1/1:4,12:16:45.10:903,45,0	1/1:16,0:16:2.64:55,3,0	1/1:3,20:24:0.47:1,0,0	0/0:19,0:19:21.07:0,21,283	0/0:13,0:12:15.05:0,15,202	./.	0/0:16,0:16:24.75:0,25,421	0/0:18,0:18:41.23:0,41,625	0/1:15,0:15:0:0,0,0	0/0:9,0:9:6.41:0,6,226
chr10	48153205	.	GCGCACACACACACACACACACA	G	5004.91	PASS	AB=1.000;AC=11;AF=0.204;AN=54;BaseQRankSum=8.574;DP=507;FS=13.980;HRun=0;HaplotypeScore=248.0341;InbreedingCoeff=0.8014;MQ=59.67;MQ0=9;MQRankSum=-7.109;QD=51.07;ReadPosRankSum=3.852;VQSLOD=2.1954;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:93:0,93,6411	0/0:4,0:4:12.04:0,12,1040	1/1:18,0:7:5.74:37,6,0	0/1:15,0:9:10.94:11,0,50	0/0:15,0:15:30.12:0,30,1494	0/0:19,0:19:54.15:0,54,4083	0/0:30,0:30:75.64:0,76,5502	0/0:15,0:15:36:0,36,1785	0/0:17,0:17:51.15:0,51,4275	0/0:23,0:22:60.13:0,60,4050	0/0:17,0:17:33.03:0,33,1900	1/1:0,17:17:27.09:1633,27,0	1/1:2,15:17:17.93:1108,18,0	0/0:18,0:18:37.96:0,38,1925	0/0:16,0:16:45.12:0,45,3967	0/0:17,0:17:32.63:0,33,1417	0/0:29,0:29:69.14:0,69,5618	0/0:29,0:30:49.07:0,49,5269	0/0:17,0:16:47.35:0,47,1474	0/0:15,0:16:8.60:0,9,64	0/0:23,0:23:6.48:0,6,307	1/1:1,17:18:21.07:1292,21,0	1/1:1,12:12:15.05:924,15,0	./.	0/0:15,0:15:27.06:0,27,2089	0/0:18,0:18:48.16:0,48,4015	0/0:14,0:14:5.96:0,6,49	0/0:9,0:9:24.01:0,24,2110
chr10	48154360	.	AC	A	6421.02	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=11.556;DP=588;FS=8.444;HRun=3;HaplotypeScore=69.1963;InbreedingCoeff=0.9985;MQ=82.42;MQ0=0;MQRankSum=-7.284;QD=35.09;ReadPosRankSum=3.012;VQSLOD=5.3835;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:93.26:0,93,1294	0/0:8,0:8:18.06:0,18,259	0/0:18,0:18:54.18:0,54,758	0/0:21,0:21:63.17:0,63,833	1/1:2,31:33:87.25:1055,87,0	0/0:21,0:21:63.20:0,63,888	0/0:18,0:18:51.17:0,51,729	0/0:28,0:28:78.25:0,78,1090	0/0:18,0:18:54.18:0,54,778	1/1:3,21:24:66.19:799,66,0	1/1:0,14:14:42.13:516,42,0	0/0:22,0:22:66.22:0,66,936	0/0:24,0:24:72.24:0,72,1034	1/1:1,19:20:60.19:743,60,0	0/0:20,0:20:57.19:0,57,821	0/0:21,0:21:60.19:0,60,845	1/1:0,18:18:48.62:595,49,0	1/1:1,10:11:33.10:409,33,0	0/0:17,0:17:48.16:0,48,691	0/0:24,0:24:66.21:0,66,923	0/0:13,0:13:27.09:0,27,388	0/0:19,0:19:54.14:0,54,744	0/0:28,0:28:81.27:0,81,1144	0/0:22,0:22:63.18:0,63,866	1/1:1,22:23:66.21:818,66,0	1/1:3,25:28:84.26:1041,84,0	0/0:27,0:27:75.17:0,75,1006	1/1:0,12:12:36.11:446,36,0
chr10	48154408	.	GA	G	6553.17	PASS	AB=0.839;AC=32;AF=0.571;AN=56;BaseQRankSum=13.039;DP=552;FS=11.297;HRun=10;HaplotypeScore=69.5430;InbreedingCoeff=0.8459;MQ=63.13;MQ0=0;MQRankSum=-3.769;QD=20.54;ReadPosRankSum=0.355;VQSLOD=5.1174;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:96.19:0,96,1024	0/0:9,0:9:21.06:0,21,232	0/1:8,1:9:15.08:15,0,57	0/1:5,2:7:38.14:57,0,38	1/1:1,31:32:71.96:625,72,0	0/0:25,0:26:72.02:0,72,771	0/0:21,0:21:54.11:0,54,573	1/1:5,20:25:59.98:520,60,0	0/0:22,0:22:57.15:0,57,631	1/1:3,18:21:53.99:469,54,0	1/1:4,17:21:20.78:405,21,0	0/0:18,0:18:45.12:0,45,498	0/0:19,0:19:48.11:0,48,518	1/1:6,20:26:65.94:564,66,0	0/0:16,0:15:45.12:0,45,498	1/1:0,13:13:35.99:312,36,0	1/1:1,12:13:32.99:286,33,0	1/1:2,8:10:20.99:182,21,0	1/1:2,23:25:65.89:561,66,0	1/1:3,23:26:62.97:547,63,0	1/1:1,15:16:35.99:313,36,0	0/0:20,0:21:44.94:0,45,470	0/0:26,0:26:60.16:0,60,663	0/0:17,0:17:48.13:0,48,531	1/1:2,14:16:20.33:317,20,0	1/1:3,22:25:68.98:599,69,0	1/1:0,28:28:80.98:703,81,0	1/1:3,3:6:8.98:78,9,0
chr10	48154561	.	A	AGGAACATGTGCCC	9223.64	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-7.843;DP=653;FS=37.277;HRun=0;HaplotypeScore=239.1400;InbreedingCoeff=0.9913;MQ=86.28;MQ0=0;MQRankSum=-9.337;QD=124.64;ReadPosRankSum=-0.888;VQSLOD=3.5114;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,144,5466	0/0:15,0:15:39.13:0,39,1432	0/0:21,0:21:54.18:0,54,1969	0/0:33,0:33:96.26:0,96,3433	0/0:30,0:30:81.28:0,81,3253	0/0:24,0:24:72.23:0,72,2816	0/0:23,0:23:63.22:0,63,2384	1/1:12,4:19:54.17:2689,54,0	0/0:24,0:24:69.24:0,69,2843	0/0:28,0:28:84.23:0,84,3386	0/0:22,0:22:60.21:0,60,2201	0/0:28,0:28:78.27:0,78,3102	0/0:32,0:32:96.33:0,96,3860	0/0:26,0:26:75.24:0,75,2762	0/0:28,0:28:81.28:0,81,3241	1/1:3,5:10:24.08:1625,24,0	0/0:25,0:25:63.19:0,63,2396	0/0:26,0:26:78.27:0,78,2974	1/1:4,4:11:27.06:1388,27,0	1/1:3,2:9:12.04:540,12,0	1/1:5,5:13:18.06:1001,18,0	0/0:17,0:17:48.16:0,48,1919	0/0:29,0:29:81.28:0,81,3305	0/0:24,0:23:66.23:0,66,2625	0/0:27,0:27:75.26:0,75,3004	0/0:32,0:32:93.31:0,93,3722	1/1:3,7:12:30.10:1981,30,0	0/0:12,0:12:36.12:0,36,1339
chr10	48154721	.	T	TCAGCTTATGTCATAGAGGT	2263.15	PASS	AB=0.778;AC=23;AF=0.958;AN=24;BaseQRankSum=-2.659;DP=40;FS=8.783;HRun=0;HaplotypeScore=29.4300;InbreedingCoeff=-0.2197;MQ=156.89;MQ0=0;MQRankSum=-2.199;QD=73.00;ReadPosRankSum=-0.492;VQSLOD=1.3693;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,0:1:3.01:50,3,0	1/1:1,0:1:3.01:131,3,0	1/1:6,0:9:1.91:884,2,0	0/1:5,1:7:38.61:707,0,39	1/1:1,0:1:3.01:48,3,0	1/1:1,0:1:3.01:102,3,0	./.	./.	1/1:2,0:2:3.01:104,3,0	./.	./.	./.	1/1:1,0:1:2.98:21,3,0	1/1:2,0:2:6.01:63,6,0	./.	./.	./.	./.	./.	./.	./.	1/1:3,0:3:9.03:151,9,0	./.	./.	./.	1/1:2,0:2:3:27,3,0	./.	1/1:1,0:1:3.01:55,3,0
chr10	48154805	.	GTA	G	385.01	PASS	AB=0.976;AC=15;AF=0.268;AN=56;BaseQRankSum=-2.810;DP=428;FS=1.706;HRun=0;HaplotypeScore=106.1235;InbreedingCoeff=0.0640;MQ=41.44;MQ0=3;MQRankSum=-2.629;QD=2.26;ReadPosRankSum=-0.892;VQSLOD=2.2395;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:17.42:0,17,131	0/0:14,0:14:5.94:0,6,126	0/0:15,0:5:7.51:0,8,42	0/0:14,0:4:5.13:0,5,80	1/1:19,3:22:8.69:62,9,0	0/0:17,0:17:5.95:0,6,49	0/0:23,0:23:17.78:0,18,123	0/0:19,0:18:38.61:0,39,597	0/1:15,0:15:17.73:18,0,41	0/1:18,2:20:80.75:121,0,81	1/1:8,2:10:5.93:50,6,0	0/0:15,0:15:4.79:0,5,81	0/0:20,0:20:23.53:0,24,276	1/1:11,0:11:2.94:18,3,0	0/0:19,0:19:11.39:0,11,89	0/0:13,0:13:8.93:0,9,107	0/0:5,0:5:2.80:0,3,13	0/1:10,0:9:33.82:54,0,34	0/1:5,0:5:10.32:10,0,58	0/0:19,0:19:17.61:0,18,198	0/0:8,0:8:17.91:0,18,135	0/0:20,0:18:5.73:0,6,49	0/0:14,0:14:5.92:0,6,50	0/1:7,0:7:0.07:0,0,0	0/1:26,0:26:12.97:19,0,13	0/1:12,2:14:49.83:84,0,50	0/1:19,0:18:11.55:12,0,187	0/1:11,0:11:28.47:88,0,28
chr10	48154816	.	T	TA	338.33	PASS	AB=0.960;AC=25;AF=0.446;AN=56;BaseQRankSum=1.868;DP=413;FS=5.476;HRun=0;HaplotypeScore=133.9995;InbreedingCoeff=0.2094;MQ=55.45;MQ0=3;MQRankSum=-8.886;QD=1.37;ReadPosRankSum=3.477;VQSLOD=1.8938;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:27:9.02:48,9,0	0/1:13,0:13:4.51:11,0,5	0/0:23,0:13:5.91:0,6,137	0/0:18,0:8:19.46:0,19,147	0/0:25,1:25:1.10:0,1,5	1/1:15,0:15:3.31:27,3,0	1/1:22,0:22:11.74:41,12,0	0/1:19,0:18:3.22:3,0,39	0/1:14,0:14:6.18:6,0,37	0/1:14,1:15:18.44:32,0,18	0/0:7,0:7:1.77:0,2,5	0/1:12,1:13:2.50:2,0,20	0/1:14,0:14:21.21:49,0,21	1/1:11,0:11:1.27:8,1,0	0/0:18,0:18:7.58:0,8,21	0/0:12,0:12:3.54:0,4,8	1/1:6,0:6:7.10:29,7,0	1/1:13,0:13:11.87:38,12,0	0/0:3,0:3:4.91:0,5,15	0/0:12,0:12:7.39:0,7,17	0/0:14,0:14:4.38:0,4,12	1/1:14,0:13:0.37:14,0,0	0/0:11,0:11:2.24:0,2,6	0/1:8,0:9:0:0,0,1	0/0:21,0:22:5.69:0,6,14	0/1:16,0:16:9.18:45,0,9	0/1:12,1:14:9.99:62,0,10	1/1:12,0:12:22.59:77,23,0
chr10	48154818	.	C	CA	10777.94	PASS	AB=0.770;AC=53;AF=0.946;AN=56;BaseQRankSum=-4.249;DP=409;FS=35.219;HRun=0;HaplotypeScore=79.7213;InbreedingCoeff=0.1436;MQ=57.29;MQ0=3;MQRankSum=-2.121;QD=26.35;ReadPosRankSum=2.613;VQSLOD=3.1611;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,25:25:48:659,48,0	1/1:0,11:11:30.03:414,30,0	0/1:22,1:14:85.22:85,0,100	0/1:15,3:8:99:134,0,99	1/1:3,22:24:29.59:455,30,0	1/1:0,13:13:26.65:399,27,0	1/1:0,20:20:35.54:513,36,0	1/1:1,19:19:54.18:861,54,0	1/1:1,11:12:20.95:257,21,0	1/1:3,13:16:45.13:687,45,0	1/1:1,5:6:5.53:95,6,0	1/1:1,9:10:24.04:315,24,0	1/1:0,12:12:33.11:504,33,0	1/1:1,13:14:14.57:168,15,0	1/1:1,18:19:29.54:410,30,0	1/1:0,11:11:21.96:308,22,0	1/1:1,6:7:12.04:191,12,0	1/1:1,13:14:27.09:431,27,0	1/1:0,3:3:9.03:144,9,0	1/1:0,13:13:24.08:384,24,0	1/1:1,16:17:35.63:575,36,0	1/1:0,15:14:26.85:385,27,0	1/1:1,10:11:11.55:182,12,0	0/1:1,8:9:0.02:0,0,1	1/1:1,20:21:36.81:497,37,0	1/1:2,13:15:45.10:685,45,0	1/1:2,11:13:36.05:515,36,0	1/1:4,11:15:33.11:526,33,0
chr10	48155771	.	AGCAC	A	5936.06	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=12.834;DP=604;FS=0.400;HRun=0;HaplotypeScore=100.1575;InbreedingCoeff=0.9964;MQ=70.76;MQ0=1;MQRankSum=-3.066;QD=55.48;ReadPosRankSum=2.480;VQSLOD=6.3042;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,117,3326	0/0:8,0:8:24.08:0,24,695	0/0:24,0:24:72.25:0,72,1968	0/0:34,0:33:99:0,99,2742	0/0:21,0:21:57.20:0,57,1623	0/0:12,0:12:36.12:0,36,1043	0/0:23,0:23:69.24:0,69,1984	0/0:32,0:32:96.32:0,96,2715	0/0:19,0:19:57.20:0,57,1637	0/0:20,0:20:60.21:0,60,1731	0/0:28,0:28:78.27:0,78,2257	1/1:0,26:26:78.27:1490,78,0	1/1:0,28:29:78.27:1609,78,0	0/0:24,0:24:69.24:0,69,1997	0/0:20,0:20:60.21:0,60,1733	0/0:25,0:25:75.26:0,75,2171	0/0:15,0:15:45.15:0,45,1285	0/0:7,0:7:21.07:0,21,607	0/0:29,0:28:84.23:0,84,2233	0/0:18,0:18:54.19:0,54,1539	0/0:31,0:31:90.31:0,90,2597	1/1:0,13:13:39.13:786,39,0	1/1:0,16:16:45.07:858,45,0	1/1:0,23:23:56.37:1194,56,0	0/0:9,0:9:27.09:0,27,781	0/0:24,0:24:72.25:0,72,2083	0/0:27,0:27:81.28:0,81,2341	0/0:7,0:7:18.06:0,18,521
chr10	48155885	.	G	GACACACACAC	4796.30	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=1.297;DP=691;FS=8.903;HRun=0;HaplotypeScore=205.6376;InbreedingCoeff=0.8200;MQ=72.18;MQ0=2;MQRankSum=-7.014;QD=27.10;ReadPosRankSum=-4.933;VQSLOD=2.3976;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:35:87.27:0,87,2376	0/0:11,0:12:18:0,18,322	0/0:38,0:25:20.68:0,21,239	0/0:39,0:27:18.04:0,18,335	0/0:23,0:25:51.14:0,51,1308	0/0:22,0:23:51.16:0,51,1336	0/0:20,0:23:54.06:0,54,1250	1/1:21,0:35:65.85:1097,66,0	0/0:14,0:15:27.09:0,27,771	0/0:30,0:31:64.06:0,64,1575	0/0:16,0:17:39.07:0,39,1136	0/0:20,0:22:54.16:0,54,1468	0/0:21,0:22:51.18:0,51,1432	0/0:23,0:25:57.07:0,57,1520	0/0:23,0:24:42.10:0,42,1168	1/1:5,0:14:21.43:86,21,0	0/0:25,0:27:57.17:0,57,1657	0/1:30,0:33:99:194,0,1676	1/1:11,7:17:33.10:1117,33,0	1/1:8,8:19:4.71:821,5,0	1/1:18,5:28:2.91:121,3,0	0/0:17,0:18:44.95:0,45,1131	0/0:21,0:24:42.09:0,42,1039	0/0:39,0:46:96.26:0,96,2655	0/0:13,0:15:38.79:0,39,946	0/0:26,0:27:49.21:0,49,1311	1/1:17,7:29:30.10:1362,30,0	0/0:5,0:6:9.03:0,9,252
chr10	48157902	.	AGT	A	2460.88	PASS	AB=0.951;AC=13;AF=0.232;AN=56;BaseQRankSum=9.166;DP=562;FS=31.282;HRun=0;HaplotypeScore=81.9607;InbreedingCoeff=0.7594;MQ=58.54;MQ0=1;MQRankSum=2.881;QD=16.41;ReadPosRankSum=5.835;VQSLOD=1.7462;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,1:33:32.57:0,33,996	0/0:7,0:7:18.02:0,18,241	0/0:29,0:16:12.39:0,12,302	0/0:24,0:15:33.08:0,33,476	0/0:25,0:25:72.22:0,72,1120	0/0:24,0:24:60.17:0,60,909	0/0:25,1:26:20.53:0,21,814	0/0:31,0:31:71.51:0,72,655	0/1:13,1:14:3.53:4,0,451	0/0:25,0:25:54.18:0,54,876	0/0:25,0:25:57.18:0,57,895	1/1:5,15:20:45.14:550,45,0	1/1:4,8:12:24.07:293,24,0	0/0:13,0:13:27.09:0,27,438	0/0:17,0:17:48.15:0,48,755	0/0:8,0:13:11.83:0,12,87	0/0:23,0:23:48.16:0,48,767	0/0:17,0:17:42.13:0,42,648	0/0:9,0:10:17.98:0,18,168	0/0:15,0:17:5.49:0,5,24	0/1:19,0:19:0:0,0,0	1/1:1,12:13:36.11:439,36,0	1/1:8,24:32:66.20:803,66,0	1/1:2,14:17:44.97:527,45,0	0/0:19,0:19:48.15:0,48,750	0/1:21,2:23:22.17:22,0,657	0/0:21,0:22:23.89:0,24,195	0/0:8,0:8:24.08:0,24,378
chr10	48158061	.	CCTCTCT	C	377.07	PASS	AB=1.000;AC=11;AF=0.250;AN=44;BaseQRankSum=4.785;DP=427;FS=2.401;HRun=0;HaplotypeScore=82.0153;InbreedingCoeff=0.5080;MQ=67.89;MQ0=15;MQRankSum=-2.874;QD=3.70;ReadPosRankSum=-1.600;VQSLOD=1.5352;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:17.96:0,18,234	1/1:3,0:3:2.97:20,3,0	./.	./.	0/0:15,0:15:3:0,3,25	0/0:17,0:16:5.99:0,6,50	0/0:7,0:7:3.01:0,3,91	1/1:30,0:28:0.47:1,0,0	0/0:6,0:8:3.01:0,3,38	0/0:13,0:12:3.01:0,3,94	./.	0/0:23,0:23:15.04:0,15,279	0/0:8,0:9:5.10:0,5,49	0/0:16,0:15:6.02:0,6,154	1/1:8,7:16:12.04:222,12,0	0/0:8,0:8:2.97:0,3,20	0/0:32,0:31:24.06:0,24,429	0/0:16,0:15:15.02:0,15,332	0/1:21,0:18:0:0,0,0	./.	1/1:16,0:16:5.05:48,5,0	./.	0/0:3,0:3:3.01:0,3,50	0/0:24,0:25:35.19:0,35,861	0/0:15,0:15:3.01:0,3,67	0/0:14,0:14:15.51:0,16,305	1/1:7,0:15:15.05:209,15,0	./.
chr10	48158200	.	CAGCCCCCTCAGCCTT	C	6680.42	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=11.337;DP=370;FS=6.277;HRun=0;HaplotypeScore=142.2144;InbreedingCoeff=0.8508;MQ=78.85;MQ0=0;MQRankSum=-7.529;QD=35.53;ReadPosRankSum=0.174;VQSLOD=3.9507;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:72.20:0,72,4379	0/0:4,0:4:9.02:0,9,453	0/0:11,0:11:16.75:0,17,873	0/0:12,0:12:27.05:0,27,1198	1/1:0,5:5:2.94:18,3,0	0/0:14,0:14:39.13:0,39,2508	0/0:14,0:14:36.12:0,36,2573	1/1:8,11:19:29.90:481,30,0	0/0:10,0:10:27.09:0,27,1752	1/1:2,4:6:11.96:296,12,0	1/1:0,5:5:6.02:239,6,0	0/0:20,0:20:51.16:0,51,3488	0/0:17,0:17:39.13:0,39,2508	1/1:6,4:10:12.04:510,12,0	0/0:15,0:15:36.12:0,36,2445	1/1:1,8:9:21.07:892,21,0	1/1:7,18:25:12.04:509,12,0	1/1:0,7:7:9.03:382,9,0	1/1:10,10:19:27.05:662,27,0	1/1:2,3:5:3.01:127,3,0	1/1:22,12:34:8.21:379,8,0	0/0:1,0:1:3.01:0,3,123	0/0:3,0:3:9.03:0,9,441	0/0:27,0:27:57.11:0,57,3439	1/1:2,8:10:9.03:382,9,0	1/1:5,7:12:21.05:757,21,0	1/1:1,11:12:12.04:509,12,0	1/1:2,7:9:15.05:538,15,0
chr10	48158658	.	T	TCTC	587.37	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=-1.496;DP=276;FS=1.091;HRun=0;HaplotypeScore=62.8771;InbreedingCoeff=0.6166;MQ=34.27;MQ0=38;MQRankSum=-3.290;QD=11.30;ReadPosRankSum=-0.385;VQSLOD=2.9718;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:8:18.13:0,18,352	0/0:5,0:5:15.05:0,15,255	0/0:22,0:5:15.03:0,15,204	0/0:19,0:3:9.03:0,9,133	0/0:8,0:8:15.32:0,15,78	0/0:18,0:17:36.12:0,36,602	0/0:9,0:6:18.06:0,18,305	0/0:17,0:14:35.75:0,36,256	0/0:3,0:3:8.90:0,9,117	0/0:9,0:8:20.54:0,21,139	0/0:6,0:4:8.60:0,9,46	1/1:1,6:6:11.97:224,12,0	1/1:5,4:7:12.02:229,12,0	0/0:14,0:12:20.68:0,21,122	0/0:4,0:4:9.03:0,9,153	0/0:9,0:9:26.62:0,27,173	0/0:8,0:5:12.19:0,12,63	0/0:7,0:3:8.76:0,9,61	0/0:4,0:3:8.92:0,9,62	0/0:4,0:3:8.68:0,9,52	0/0:2,0:2:5.90:0,6,37	1/1:14,1:11:2.88:15,3,0	1/1:9,3:10:9.03:206,9,0	0/1:8,0:6:56.95:57,0,114	0/0:9,0:9:20.90:0,21,124	0/0:9,0:9:25:0,25,164	0/0:17,0:17:2.96:0,3,19	0/0:10,0:7:14.87:0,15,104
chr10	48158666	.	TCCTCCTCTTCCTCCTCCTCCTCCTCCA	T	1291.63	PASS	AB=1.000;AC=20;AF=0.357;AN=56;BaseQRankSum=-1.504;DP=262;FS=2.357;HRun=0;HaplotypeScore=145.0060;InbreedingCoeff=0.3248;MQ=35.42;MQ0=21;MQRankSum=-4.629;QD=10.76;ReadPosRankSum=-1.720;VQSLOD=2.3864;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:24.06:0,24,987	0/0:5,0:5:11.99:0,12,340	0/0:23,0:5:8.07:0,8,135	0/0:19,0:3:9.01:0,9,90	1/1:8,0:8:3.81:19,4,0	0/0:18,0:18:30.05:0,30,1355	0/0:8,0:7:16.12:0,16,250	1/1:17,0:14:32.66:223,33,0	0/0:3,0:3:6.02:0,6,135	0/1:10,0:8:47.94:48,0,116	0/1:6,0:5:7.36:7,0,176	0/0:7,0:7:8.54:0,9,117	0/0:8,0:6:9.03:0,9,386	0/1:14,0:13:5.89:6,0,481	0/0:4,0:4:6:0,6,52	1/1:11,0:11:26.68:393,27,0	0/1:7,0:5:8.98:9,0,130	0/0:3,0:3:1.06:0,1,75	1/1:5,0:4:5.99:200,6,0	1/1:3,0:3:8.92:218,9,0	1/1:3,0:2:5.90:37,6,0	0/0:12,0:11:6.02:0,6,155	0/0:10,0:9:11.87:0,12,145	0/0:4,0:4:2.94:0,3,18	0/1:11,0:11:43.51:44,0,157	0/0:9,0:9:4.09:0,4,484	1/1:0,17:17:5.93:211,6,0	0/1:8,0:7:52:52,0,88
chr10	48158671	.	CTCT	C	1280.16	PASS	AB=0.917;AC=31;AF=0.554;AN=56;BaseQRankSum=2.619;DP=260;FS=0.000;HRun=0;HaplotypeScore=70.4095;InbreedingCoeff=0.5373;MQ=35.15;MQ0=16;MQRankSum=-4.166;QD=7.95;ReadPosRankSum=-0.566;VQSLOD=2.5222;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:28.56:0,29,277	0/0:5,0:5:11.93:0,12,105	0/0:19,0:5:8.06:0,8,100	0/0:16,0:3:9.02:0,9,115	1/1:9,0:9:2.47:16,2,0	0/0:17,0:17:30.02:0,30,293	0/0:7,0:7:14.66:0,15,146	1/1:15,0:13:29.69:202,30,0	0/0:3,0:3:8.69:0,9,85	1/1:8,3:9:16.73:127,17,0	1/1:4,2:5:11.55:101,12,0	0/0:6,0:6:8.45:0,8,50	0/0:7,0:5:8.99:0,9,94	1/1:8,7:14:29.72:252,30,0	0/0:5,0:5:0.59:0,1,44	1/1:10,0:10:8.84:76,9,0	1/1:3,3:5:10.46:75,10,0	0/1:2,1:3:21.53:45,0,22	0/1:7,0:6:9.93:10,0,28	1/1:4,0:4:0.05:33,0,0	1/1:3,0:2:1.83:17,2,0	1/1:13,0:12:2.53:13,3,0	0/1:14,0:13:8.39:8,0,45	0/0:4,0:4:2.94:0,3,18	1/1:9,2:11:20.46:166,20,0	1/1:6,2:8:23.79:188,24,0	1/1:17,0:17:4.74:22,5,0	1/1:8,1:8:14.92:119,15,0
chr10	48158680	.	C	CTCT	108.42	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=4.654;DP=270;FS=0.885;HRun=0;HaplotypeScore=85.1402;InbreedingCoeff=0.1068;MQ=34.71;MQ0=20;MQRankSum=-2.032;QD=0.88;ReadPosRankSum=-0.550;VQSLOD=0.9006;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:16.85:0,17,170	0/0:5,0:5:14.92:0,15,117	0/0:16,0:2:0.47:0,0,1	0/0:14,0:3:9:0,9,85	0/0:9,0:9:4.17:0,4,20	0/0:19,0:19:29.87:0,30,257	0/0:6,0:6:7.73:0,8,80	0/0:15,0:12:26.74:0,27,185	0/0:4,0:3:1.38:0,1,42	0/1:10,0:8:13.42:13,0,74	0/1:7,0:6:6.10:6,0,27	0/1:5,0:5:8.83:29,0,9	1/1:7,0:5:5.68:38,6,0	0/1:18,0:17:6.59:7,0,121	0/0:5,0:5:11.82:0,12,86	0/1:9,0:9:7.13:7,0,85	0/0:5,0:4:7.92:0,8,42	0/0:3,0:3:5.36:0,5,31	0/1:7,0:5:7.16:23,0,7	0/1:5,0:5:15.02:15,0,26	0/0:3,0:2:5.90:0,6,37	0/1:17,0:15:2.03:28,0,2	1/1:7,9:15:5.93:54,6,0	1/1:5,0:5:2.96:20,3,0	0/0:12,0:12:3.85:0,4,59	0/0:13,0:12:33.76:0,34,221	0/1:17,0:17:11.01:15,0,11	0/0:7,0:6:14.38:0,14,112
chr10	48158690	.	TCCA	T	1833.42	PASS	AB=0.988;AC=47;AF=0.870;AN=54;BaseQRankSum=1.092;DP=234;FS=0.000;HRun=0;HaplotypeScore=81.3945;InbreedingCoeff=-0.0913;MQ=41.42;MQ0=19;MQRankSum=-2.744;QD=7.90;ReadPosRankSum=-0.487;VQSLOD=2.6287;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:10,0:10:44.87:72,0,45	1/1:3,0:3:2.47:24,2,0	1/1:15,0:4:5.29:42,5,0	0/1:10,0:5:15.19:33,0,15	0/1:4,0:4:0:0,0,0	0/1:16,0:16:14.47:94,0,14	0/1:4,0:4:9.55:36,0,10	1/1:4,0:1:2.98:21,3,0	0/1:4,0:3:4.96:19,0,5	1/1:6,3:7:17.83:141,18,0	1/1:7,1:7:8.96:85,9,0	1/1:8,0:7:11.82:76,12,0	0/1:7,0:5:11.14:11,0,15	1/1:11,7:17:24.33:216,24,0	1/1:3,0:3:2.29:5,2,0	1/1:1,0:2:6.02:68,6,0	1/1:2,3:4:7.51:56,8,0	1/1:2,1:3:5.96:52,6,0	1/1:8,0:5:14.59:98,15,0	1/1:5,0:5:14.89:119,15,0	./.	1/1:18,0:16:4.37:66,4,0	1/1:16,0:15:5.92:39,6,0	1/1:5,0:5:5.85:34,6,0	1/1:5,2:7:14.87:124,15,0	1/1:13,2:14:41.65:315,42,0	1/1:17,0:17:3:26,3,0	1/1:6,1:6:11.85:81,12,0
chr10	48158698	.	C	CTCT	928.40	PASS	AB=0.944;AC=13;AF=0.250;AN=52;BaseQRankSum=2.694;DP=246;FS=3.346;HRun=0;HaplotypeScore=105.5880;InbreedingCoeff=0.3136;MQ=44.06;MQ0=12;MQRankSum=-3.012;QD=9.57;ReadPosRankSum=2.293;VQSLOD=3.2695;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:17.06:0,17,156	0/0:2,0:2:5.95:0,6,44	0/1:20,0:10:1.40:1,0,58	0/0:10,0:5:4.92:0,5,101	0/1:3,0:3:0:0,0,0	0/0:15,0:15:24.31:0,24,203	0/0:4,0:4:2.20:0,2,7	0/0:8,0:6:17.80:0,18,120	./.	1/1:11,1:10:29.78:287,30,0	0/1:8,0:7:2.03:117,0,2	0/0:7,0:6:14.60:0,15,91	0/0:6,0:4:6.34:0,6,36	0/1:12,5:16:9.89:176,0,10	0/0:3,0:3:2.96:0,3,19	0/0:6,0:6:14.81:0,15,104	0/1:4,1:4:4.02:56,0,4	1/1:2,0:2:3.01:33,3,0	0/0:10,0:8:14.92:0,15,135	0/0:5,0:5:14.71:0,15,96	./.	0/0:14,0:13:13.50:0,13,80	0/0:15,0:14:2.97:0,3,20	0/0:5,0:5:5.91:0,6,38	0/1:6,0:6:8:84,0,8	0/1:18,0:17:37.58:170,0,38	0/0:23,0:23:14.70:0,15,90	1/1:6,0:6:17.19:149,17,0
chr10	48160150	.	T	TAGAC	10735.97	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-14.582;DP=694;FS=3.007;HRun=0;HaplotypeScore=110.6826;InbreedingCoeff=0.9992;MQ=87.45;MQ0=0;MQRankSum=-6.046;QD=65.86;ReadPosRankSum=-0.467;VQSLOD=6.8528;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,108,1950	0/0:13,0:13:39.10:0,39,656	0/0:30,0:30:75.72:0,76,1310	0/0:23,0:22:51.63:0,52,897	0/0:25,0:25:75.24:0,75,1331	0/0:17,0:17:48.16:0,48,874	0/0:25,0:25:72.25:0,72,1325	1/1:15,22:38:84.01:2084,84,0	0/0:20,0:20:60.21:0,60,1094	0/0:31,0:31:90.30:0,90,1621	0/0:28,0:28:84.29:0,84,1546	0/0:22,0:22:66.23:0,66,1189	0/0:24,0:24:57.20:0,57,1049	0/0:25,0:25:66.20:0,66,1182	0/0:21,0:21:57.18:0,57,1019	1/1:3,25:28:75.26:1980,75,0	0/0:28,0:28:75.26:0,75,1370	0/0:27,0:27:62.36:0,62,1344	1/1:3,11:15:42.13:1052,42,0	1/1:1,20:22:54.19:1426,54,0	1/1:1,23:26:66.23:1742,66,0	0/0:34,0:34:96.32:0,96,1736	0/0:19,0:19:51.16:0,51,900	0/0:23,0:23:66.23:0,66,1190	0/0:21,0:21:54.17:0,54,964	0/0:29,0:29:81.27:0,81,1437	1/1:3,30:34:93.32:2451,93,0	0/0:7,0:7:21.07:0,21,386
chr10	48160725	.	T	TGAAA	25527.65	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-12.416;DP=646;FS=0.000;HRun=0;HaplotypeScore=90.9354;InbreedingCoeff=0.9918;MQ=72.91;MQ0=0;MQRankSum=-7.573;QD=68.26;ReadPosRankSum=1.185;VQSLOD=7.1290;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:90.28:0,90,1792	0/0:3,0:3:9.02:0,9,135	0/0:17,0:17:41.32:0,41,899	0/0:18,0:18:44.79:0,45,682	1/1:1,32:38:96.23:2475,96,0	0/0:30,0:30:90.27:0,90,1790	0/0:19,0:19:57.15:0,57,1034	1/1:0,23:34:93.24:2161,93,0	0/0:20,0:20:60.18:0,60,1183	1/1:0,17:24:69.17:1621,69,0	1/1:0,18:25:54.19:1507,54,0	0/0:17,0:17:51.18:0,51,1068	0/0:32,0:32:96.33:0,96,1991	1/1:0,15:24:39.13:1126,39,0	0/0:29,0:29:81.25:0,81,1622	1/1:0,28:32:78.27:2258,78,0	1/1:1,19:23:48.10:1321,48,0	1/1:0,20:21:54.19:1561,54,0	1/1:0,8:11:33.09:833,33,0	1/1:0,18:25:63.08:1620,63,0	1/1:0,32:33:93.28:2625,93,0	0/0:16,0:16:48.16:0,48,982	0/0:23,0:23:69.22:0,69,1381	0/0:18,0:18:51.18:0,51,1056	1/1:0,22:22:63.16:1754,63,0	1/1:0,22:28:81.03:1917,81,0	1/1:1,23:25:69.24:1965,69,0	1/1:0,9:9:27.09:782,27,0
chr10	48163028	.	C	CA	4606.49	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-10.492;DP=496;FS=21.901;HRun=7;HaplotypeScore=51.8490;InbreedingCoeff=0.9297;MQ=60.25;MQ0=3;MQRankSum=0.534;QD=29.91;ReadPosRankSum=2.179;VQSLOD=3.1715;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,126,1197	0/0:3,0:3:9.01:0,9,87	0/0:15,1:9:23.71:0,24,213	0/0:27,0:19:51.02:0,51,474	1/1:1,7:8:20.98:221,21,0	0/0:18,0:18:51.08:0,51,492	0/0:13,0:13:36.06:0,36,348	0/0:34,0:33:93.13:0,93,891	0/0:15,0:15:39.05:0,39,371	1/1:3,14:17:42.13:507,42,0	1/1:1,4:5:12.04:145,12,0	0/0:16,0:16:42.05:0,42,400	0/0:18,0:18:42.07:0,42,405	1/1:1,16:17:42.06:489,42,0	0/0:21,0:21:54.08:0,54,521	0/0:19,0:18:51.08:0,51,492	1/1:1,33:36:94.57:1084,95,0	1/1:6,29:35:87.27:1051,87,0	0/0:23,0:23:57.08:0,57,546	0/0:6,0:6:15.02:0,15,145	0/0:23,0:23:60.10:0,60,579	0/0:5,0:5:6:0,6,58	0/0:3,0:3:9.01:0,9,87	0/0:15,0:15:42.07:0,42,406	1/1:2,15:17:39.12:471,39,0	1/1:1,17:18:51.14:603,51,0	0/0:22,0:21:54.08:0,54,521	1/1:0,1:1:3.01:36,3,0
chr10	48163219	.	C	CT	3617.36	PASS	AB=0.983;AC=32;AF=0.571;AN=56;BaseQRankSum=4.824;DP=371;FS=1.627;HRun=10;HaplotypeScore=61.9721;InbreedingCoeff=0.7763;MQ=74.78;MQ0=8;MQRankSum=-5.230;QD=15.20;ReadPosRankSum=-2.374;VQSLOD=3.3975;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,3:28:8.33:0,8,474	0/0:2,0:2:5.99:0,6,49	0/0:43,0:19:9.72:0,10,192	0/1:27,0:10:3.81:4,0,69	1/1:4,13:17:35.85:337,36,0	0/1:12,0:12:2.74:3,0,174	0/0:9,0:8:20.97:0,21,172	1/1:21,10:27:45.77:466,46,0	0/0:8,0:8:20.98:0,21,172	1/1:3,5:8:17.88:163,18,0	1/1:7,5:12:11.14:237,11,0	0/0:13,0:13:29.94:0,30,246	0/0:3,0:3:5.98:0,6,49	1/1:4,3:7:19.43:176,19,0	0/0:5,0:5:11.97:0,12,96	1/1:3,3:5:12.03:123,12,0	1/1:12,11:21:26.62:396,27,0	1/1:11,10:20:29.61:420,30,0	1/1:6,4:9:12.03:125,12,0	1/1:5,6:10:20.89:189,21,0	1/1:4,2:5:9.02:95,9,0	0/0:5,0:5:8.98:0,9,74	0/0:9,0:9:23.97:0,24,197	0/0:7,0:7:14.97:0,15,123	1/1:8,2:10:1.06:124,1,0	1/1:4,14:18:32.14:379,32,0	1/1:7,4:10:20.99:202,21,0	1/1:5,2:7:10.03:179,10,0
chr10	48163230	.	C	CTT	2235.43	PASS	AB=1.000;AC=31;AF=0.554;AN=56;BaseQRankSum=9.386;DP=382;FS=0.000;HRun=10;HaplotypeScore=71.5875;InbreedingCoeff=0.8380;MQ=76.01;MQ0=9;MQRankSum=-5.499;QD=9.12;ReadPosRankSum=0.502;VQSLOD=0.7313;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:75.16:0,75,786	0/0:2,0:2:6:0,6,56	0/1:46,0:20:8.37:8,0,137	0/0:29,0:11:4.69:0,5,73	1/1:12,0:18:25.63:210,26,0	0/0:11,0:11:26.23:0,26,285	0/0:8,0:7:21.05:0,21,223	1/1:11,1:21:28.60:243,29,0	0/0:7,0:7:18.04:0,18,192	1/1:4,0:7:10.36:102,10,0	1/1:4,0:12:26.77:212,27,0	0/0:15,0:15:33.04:0,33,342	0/0:8,0:8:24.04:0,24,244	1/1:6,0:8:5.37:65,5,0	0/0:7,0:7:15.03:0,15,160	1/1:1,0:7:9.01:83,9,0	1/1:7,1:24:30.84:263,31,0	1/1:9,0:23:17.27:182,17,0	1/1:4,0:6:14.96:114,15,0	1/1:1,0:8:24.03:227,24,0	1/1:3,1:4:8.99:98,9,0	0/0:4,0:4:12.02:0,12,120	0/0:8,0:8:18.02:0,18,192	0/0:8,0:8:18.04:0,18,191	1/1:4,1:9:15.28:154,15,0	1/1:9,0:16:26.86:250,27,0	1/1:3,2:16:14.90:173,15,0	1/1:4,0:9:8.92:68,9,0
chr10	48164309	.	G	GT	275.97	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.074;DP=562;FS=6.772;HRun=0;HaplotypeScore=70.9473;InbreedingCoeff=0.9892;MQ=73.90;MQ0=0;MQRankSum=-0.212;QD=18.40;ReadPosRankSum=1.659;VQSLOD=5.6367;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:69.19:0,69,935	0/0:11,0:11:33.11:0,33,461	0/0:12,0:11:25.87:0,26,317	0/0:22,0:19:31.77:0,32,506	0/0:18,0:18:51.17:0,51,709	0/0:26,0:26:64.98:0,65,838	0/0:24,0:24:72.17:0,72,960	0/0:32,0:31:83.08:0,83,754	0/0:15,0:15:45.15:0,45,627	0/0:33,0:33:96.31:0,96,1306	0/0:12,0:12:30.10:0,30,417	0/0:15,0:15:45:0,45,563	0/0:24,0:24:72.16:0,72,928	0/0:8,0:8:18.06:0,18,251	0/0:13,0:13:39.13:0,39,530	1/1:2,13:15:36.83:371,37,0	0/0:17,0:17:45.15:0,45,622	0/0:12,0:12:36.08:0,36,479	0/0:27,0:27:76.40:0,76,685	0/0:29,0:29:72.77:0,73,543	0/0:20,0:20:45.82:0,46,350	0/0:29,0:29:86.84:0,87,1117	0/0:19,0:19:57.19:0,57,790	0/0:27,0:27:78.26:0,78,1088	0/0:21,0:21:57.14:0,57,725	0/0:17,0:17:48.15:0,48,652	0/0:28,0:28:70.24:0,70,506	0/0:12,0:12:35.93:0,36,441
chr10	48164310	.	A	AT	3105.67	PASS	AB=0.929;AC=14;AF=0.250;AN=56;BaseQRankSum=-7.015;DP=568;FS=1.747;HRun=11;HaplotypeScore=62.8705;InbreedingCoeff=0.7981;MQ=72.24;MQ0=0;MQRankSum=0.161;QD=16.88;ReadPosRankSum=-1.801;VQSLOD=4.0052;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:59.73:0,60,465	0/0:11,0:11:29.88:0,30,232	0/0:12,0:12:1.81:0,2,60	0/1:20,0:18:4.01:4,0,133	0/0:18,0:18:38.82:0,39,302	0/0:23,3:27:25.57:0,26,371	0/0:25,1:26:32.28:0,32,434	1/1:9,22:32:45.71:615,46,0	0/0:16,0:16:44.82:0,45,348	0/0:30,0:33:80.81:0,81,597	0/0:12,0:12:20.88:0,21,162	0/0:15,0:15:29.82:0,30,227	0/0:24,0:24:53.76:0,54,418	0/0:8,0:8:14.90:0,15,116	0/0:13,0:13:26.87:0,27,209	1/1:16,0:16:39.08:394,39,0	0/0:17,0:17:32.80:0,33,253	0/0:12,0:12:26.88:0,27,209	1/1:6,17:25:29.86:498,30,0	1/1:3,28:31:75.02:720,75,0	1/1:3,16:19:39.08:396,39,0	0/0:27,2:29:35.26:0,35,457	0/0:20,0:20:53.76:0,54,415	0/0:28,0:28:71.71:0,72,557	0/0:19,0:21:43.84:0,44,326	0/0:17,0:17:44.78:0,45,343	1/1:6,21:28:66.03:652,66,0	0/1:10,1:12:14.96:15,0,156
chr10	48164710	.	G	GAACC	8648	PASS	AB=0.576;AC=11;AF=0.196;AN=56;BaseQRankSum=3.654;DP=695;FS=2.182;HRun=0;HaplotypeScore=124.3915;InbreedingCoeff=0.8882;MQ=79.04;MQ0=0;MQRankSum=-7.404;QD=54.05;ReadPosRankSum=-1.395;VQSLOD=5.8117;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,144,2599	0/0:14,0:14:36.12:0,36,653	0/0:16,0:16:42.13:0,42,731	0/0:21,0:21:48.80:0,49,833	0/0:29,0:29:84.29:0,84,1534	0/0:27,0:27:81.28:0,81,1482	0/0:37,0:37:99:0,99,1724	1/1:10,19:32:72.19:1681,72,0	0/0:18,0:18:54.16:0,54,961	0/0:22,0:22:63.21:0,63,1131	0/0:13,0:13:35.78:0,36,662	0/0:31,0:31:90.25:0,90,1561	0/0:20,0:20:60.21:0,60,1088	0/0:25,0:25:72.21:0,72,1255	0/0:22,0:22:66.18:0,66,1150	0/1:5,12:19:19.07:835,0,19	0/0:39,0:39:99:0,111,1990	0/0:25,0:25:69.21:0,69,1237	1/1:6,13:18:42.14:1107,42,0	1/1:2,13:15:33.11:865,33,0	1/1:6,38:43:99:2590,105,0	0/0:23,0:23:60.20:0,60,1069	0/0:21,0:21:63.22:0,63,1156	0/0:25,0:25:69.24:0,69,1270	0/0:15,0:15:42.14:0,42,771	0/0:30,0:30:78.27:0,78,1436	1/1:6,22:30:60.21:1571,60,0	0/0:14,0:14:42.14:0,42,773
chr10	48166109	.	TTG	T	1656.77	PASS	AB=0.981;AC=17;AF=0.304;AN=56;BaseQRankSum=0.648;DP=584;FS=1.052;HRun=0;HaplotypeScore=135.5036;InbreedingCoeff=0.5330;MQ=52.70;MQ0=8;MQRankSum=2.221;QD=6.79;ReadPosRankSum=-0.493;VQSLOD=3.3109;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:59.27:0,59,920	0/0:7,0:6:12.01:0,12,129	0/0:19,0:9:6:0,6,58	0/0:10,0:5:6.01:0,6,59	0/0:28,0:29:3:0,3,26	0/0:21,0:21:16.30:0,16,401	0/0:25,0:25:54.13:0,54,753	0/1:27,0:24:4.34:87,0,4	0/1:26,1:27:25.09:25,0,643	0/0:38,0:38:73.07:0,73,546	0/0:15,0:15:17.95:0,18,149	1/1:19,0:19:3.08:48,3,0	0/1:16,0:16:36.64:82,0,37	0/0:19,0:20:29.74:0,30,245	0/1:29,2:31:7.45:7,0,901	0/0:7,0:21:20.70:0,21,161	0/0:18,0:17:4.81:0,5,69	0/0:14,0:15:32.85:0,33,296	1/1:11,9:18:26.99:275,27,0	1/1:20,8:29:54.41:502,54,0	1/1:11,4:16:29.82:275,30,0	1/1:20,0:20:8.60:54,9,0	0/0:13,0:13:7.52:0,8,29	0/1:9,0:9:0.01:0,0,0	0/0:21,0:22:14.54:0,15,103	0/0:18,0:18:35.61:0,36,276	1/1:5,25:30:42.02:478,42,0	0/0:12,0:12:11.95:0,12,97
chr10	48166132	.	T	TGAGAGAGAGA	1662.74	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=5.491;DP=614;FS=4.815;HRun=0;HaplotypeScore=226.0591;InbreedingCoeff=0.2803;MQ=51.69;MQ0=9;MQRankSum=-7.203;QD=6.02;ReadPosRankSum=2.470;VQSLOD=2.4776;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:78.94:0,79,2165	0/0:5,0:4:12.02:0,12,238	0/0:21,0:7:15.03:0,15,338	0/0:21,0:8:13.95:0,14,298	0/1:31,0:31:11.20:11,0,94	0/0:17,0:17:25.34:0,25,1085	0/0:29,0:29:78.19:0,78,2064	0/1:35,0:31:17.48:17,0,261	0/0:32,0:32:81.09:0,81,2177	0/0:38,0:37:83.28:0,83,1086	0/0:18,0:18:6.17:0,6,246	1/1:11,1:12:14.94:390,15,0	1/1:12,1:13:19.79:438,20,0	0/1:22,0:22:99:105,0,127	0/0:28,0:28:84.26:0,84,2470	0/1:23,0:23:55.15:55,0,409	0/1:20,0:19:31.95:32,0,87	0/0:19,0:19:44.43:0,44,644	0/1:17,0:13:18.34:18,0,473	0/1:27,0:27:5.40:5,0,851	0/0:23,0:23:9.05:0,9,964	1/1:5,9:18:6.45:285,6,0	1/1:13,0:13:18.03:407,18,0	0/1:9,0:9:0.17:0,0,0	0/1:27,0:27:26.97:27,0,92	0/0:22,0:22:4.17:0,4,657	0/0:31,0:30:55.09:0,55,1171	1/1:7,0:8:10.58:49,11,0
chr10	48166134	.	T	TGTGTGTGA	8610.86	PASS	AB=0.881;AC=27;AF=0.482;AN=56;BaseQRankSum=-1.855;DP=641;FS=13.273;HRun=0;HaplotypeScore=195.4319;InbreedingCoeff=0.0455;MQ=51.81;MQ0=9;MQRankSum=-5.598;QD=19.22;ReadPosRankSum=-1.833;VQSLOD=3.1311;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:35:81.10:0,81,1901	0/0:5,0:4:12.04:0,12,283	0/0:22,0:7:15.02:0,15,199	0/0:22,0:8:12.97:0,13,164	0/1:3,25:32:17.27:102,0,17	0/0:18,0:18:42.07:0,42,869	0/0:28,0:28:78.15:0,78,1555	0/1:35,0:30:99:224,0,217	0/0:34,0:34:93.14:0,93,1696	1/1:2,30:40:99:1944,103,0	1/1:16,2:18:27.04:536,27,0	0/1:14,0:14:64.37:73,0,64	0/1:13,0:14:99:113,0,230	1/1:5,14:24:8.33:1061,8,0	0/0:28,0:29:87.24:0,87,2008	0/1:25,0:25:55.31:548,0,55	0/1:7,13:23:6.14:583,0,6	1/1:19,0:19:15.74:675,16,0	0/1:19,0:14:9.51:10,0,240	0/1:26,0:26:11.27:11,0,624	0/1:23,0:23:99:161,0,273	0/1:16,0:17:40.48:80,0,40	0/1:13,0:13:22.27:232,0,22	1/1:11,0:11:0.24:1,0,0	0/1:3,21:29:28.27:481,0,28	1/1:4,14:24:28.46:1183,28,0	0/1:31,0:30:99:127,0,252	1/1:1,5:8:12.04:466,12,0
chr10	48166214	.	T	TGTGA	2812.90	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=0.621;DP=762;FS=0.000;HRun=0;HaplotypeScore=178.4972;InbreedingCoeff=0.7759;MQ=60.72;MQ0=16;MQRankSum=-3.036;QD=19.40;ReadPosRankSum=-1.772;VQSLOD=3.1060;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:53:99:0,135,2241	0/0:10,0:10:29.94:0,30,404	0/0:42,0:14:22.73:0,23,209	0/0:41,0:24:3.46:0,3,94	0/0:25,0:24:42.62:0,43,913	0/0:25,0:25:66.08:0,66,1080	0/0:29,0:29:72:0,72,1120	0/1:30,0:18:40.30:40,0,92	0/0:32,0:32:96.21:0,96,1583	0/0:39,0:39:99:0,111,1661	0/0:19,0:20:33.07:0,33,803	1/1:2,17:19:23.83:600,24,0	1/1:6,23:30:0.40:1058,0,0	0/0:33,0:32:69.05:0,69,1206	0/0:30,0:30:78.15:0,78,1312	0/0:30,0:30:78.08:0,78,1331	0/0:25,0:25:43.64:0,44,783	0/0:18,0:19:53.79:0,54,780	0/0:17,0:15:36.07:0,36,556	0/0:20,0:20:44.93:0,45,705	0/0:41,0:39:90.18:0,90,1514	1/1:10,6:16:26.46:492,26,0	1/1:18,6:24:17.20:548,17,0	1/1:3,21:24:8.74:238,9,0	0/0:23,0:22:51.12:0,51,904	0/0:31,0:31:89.95:0,90,1306	0/0:20,0:18:46.37:0,46,763	0/0:9,0:9:26.97:0,27,419
chr10	48166239	.	GAT	G	833.35	PASS	AB=0.964;AC=7;AF=0.125;AN=56;BaseQRankSum=6.559;DP=784;FS=1.830;HRun=0;HaplotypeScore=183.1703;InbreedingCoeff=0.1612;MQ=63.51;MQ0=11;MQRankSum=1.141;QD=5.31;ReadPosRankSum=-0.426;VQSLOD=2.8356;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,141,2339	0/0:9,0:9:27.09:0,27,496	0/0:46,1:29:19.60:0,20,667	0/0:54,0:26:41.67:0,42,598	0/0:24,0:25:55.04:0,55,732	0/0:31,0:31:69.22:0,69,1287	0/0:35,0:35:93.21:0,93,1572	0/0:35,0:32:75.08:0,75,1405	0/0:28,0:28:81.03:0,81,1293	0/0:34,0:34:70.35:0,70,1018	0/0:22,0:22:22.24:0,22,595	0/0:17,0:17:25.39:0,25,327	0/1:25,1:26:18.27:18,0,344	0/0:32,0:31:31.79:0,32,633	0/0:30,0:30:71.89:0,72,1326	0/0:28,0:28:68.97:0,69,1180	0/0:22,1:23:24.49:0,24,650	0/0:19,0:19:15.24:0,15,452	0/1:15,0:12:55.76:56,0,74	0/1:20,0:20:33.54:157,0,34	0/1:55,0:54:26.49:422,0,26	0/0:16,3:19:9.48:0,9,358	0/1:15,3:18:9.82:10,0,454	0/0:22,1:23:5.93:0,6,100	0/0:21,0:20:18.86:0,19,533	0/0:28,0:27:53.64:0,54,789	1/1:21,2:21:15.68:304,16,0	0/0:12,0:12:27.06:0,27,398
chr10	48166241	.	TAG	T	2865.31	PASS	AB=0.989;AC=15;AF=0.268;AN=56;BaseQRankSum=-0.029;DP=793;FS=0.000;HRun=0;HaplotypeScore=176.5225;InbreedingCoeff=0.3391;MQ=64.43;MQ0=11;MQRankSum=2.268;QD=10.31;ReadPosRankSum=-1.776;VQSLOD=2.7433;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,126,2007	0/0:9,0:9:27.09:0,27,456	0/0:50,0:31:20.52:0,21,468	0/0:61,1:29:56.97:0,57,607	0/1:23,0:24:7.83:8,0,300	0/0:32,0:32:69.18:0,69,1096	0/0:33,0:33:84.28:0,84,1386	0/0:39,0:35:90.12:0,90,1398	0/0:28,0:28:75.04:0,75,1051	0/1:37,0:37:74.06:74,0,366	0/0:21,0:21:8.09:0,8,310	0/1:17,0:17:3.34:3,0,132	0/1:25,0:26:55.39:55,0,158	0/1:32,0:31:72.41:72,0,330	0/0:30,0:30:72:0,72,1102	0/0:28,0:28:49.49:0,49,956	0/0:23,0:23:7.29:0,7,331	0/1:18,0:18:39.74:40,0,166	1/1:9,5:11:24.05:288,24,0	1/1:9,11:20:39.12:511,39,0	1/1:31,23:53:99:1373,111,0	0/0:17,0:17:11.62:0,12,175	0/0:18,0:18:5.19:0,5,227	0/0:23,0:23:5.93:0,6,52	0/0:19,0:18:30.14:0,30,223	0/0:28,0:27:17.33:0,17,362	1/1:14,9:21:47.98:588,48,0	0/1:13,0:13:29.68:30,0,218
chr10	48166284	.	TGA	T	4983.02	PASS	AB=0.856;AC=27;AF=0.482;AN=56;BaseQRankSum=7.438;DP=903;FS=11.001;HRun=0;HaplotypeScore=188.5212;InbreedingCoeff=0.6203;MQ=54.85;MQ0=38;MQRankSum=-0.135;QD=10.67;ReadPosRankSum=0.721;VQSLOD=3.9996;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:48:99:0,114,1654	0/0:10,0:10:27.06:0,27,398	0/1:69,0:21:24.22:24,0,213	0/0:92,0:21:7.38:0,7,180	1/1:12,13:23:56.87:671,57,0	0/0:25,1:26:22.32:0,22,884	0/0:37,0:35:64.95:0,65,924	0/1:71,0:56:21:21,0,1013	0/0:36,0:36:87.18:0,87,1261	1/1:15,27:41:31.74:801,32,0	1/1:7,18:23:35.98:454,36,0	1/1:7,11:18:15.63:225,16,0	1/1:18,8:26:25.75:272,26,0	1/1:5,33:37:17.99:209,18,0	0/0:32,0:32:40.33:0,40,1021	0/0:28,0:28:57.14:0,57,815	0/1:10,9:17:0.25:361,0,0	1/1:9,4:12:27.07:326,27,0	0/1:12,1:8:28.47:28,0,90	0/0:23,0:23:60.15:0,60,887	0/0:66,1:64:99:0,99,1943	1/1:9,14:22:5.59:236,6,0	0/1:14,13:27:20.95:138,0,21	0/0:11,3:14:2.73:0,3,12	1/1:0,16:16:30.10:379,30,0	1/1:15,12:27:42.28:689,42,0	0/0:22,0:22:28.62:0,29,662	1/1:7,7:14:12.04:149,12,0
chr10	48166306	.	TGTGAGA	T	972.11	PASS	AB=0.858;AC=9;AF=0.161;AN=56;BaseQRankSum=7.724;DP=897;FS=7.093;HRun=0;HaplotypeScore=265.0491;InbreedingCoeff=0.0023;MQ=51.52;MQ0=45;MQRankSum=-4.917;QD=3.55;ReadPosRankSum=-4.651;VQSLOD=0.7052;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:49:99:0,126,4319	0/0:15,0:15:45.11:0,45,1230	0/1:34,0:6:32.08:32,0,105	0/1:49,0:8:1.34:1,0,38	0/0:32,0:30:83.98:0,84,2510	0/0:31,0:31:87.30:0,87,2801	0/0:37,0:35:93.15:0,93,2830	0/1:73,0:51:86.54:87,0,1446	0/0:45,0:45:99:0,126,4226	0/0:41,0:39:99:0,102,3113	0/0:23,0:21:57.04:0,57,1667	0/1:18,8:25:99:204,0,396	0/1:16,6:21:99:309,0,534	0/0:44,0:43:53.21:0,53,1660	0/0:37,0:37:99:0,111,3861	0/0:25,0:25:66.14:0,66,1979	0/0:20,0:17:46.02:0,46,1275	0/0:11,0:10:30.10:0,30,1082	0/0:18,0:7:9.03:0,9,266	0/0:27,0:27:78.71:0,79,2419	0/0:74,0:71:99:0,160,5132	0/1:13,12:24:99:283,0,144	0/1:18,7:25:99:161,0,137	1/1:18,2:20:2.23:27,2,0	0/0:20,0:20:45.13:0,45,1251	0/0:27,0:27:78.16:0,78,2197	0/0:28,0:28:71.99:0,72,2484	0/0:18,0:17:39.13:0,39,1306
chr10	48166321	.	ATGTG	A	197.77	PASS	AB=0.856;AC=6;AF=0.107;AN=56;BaseQRankSum=7.319;DP=870;FS=2.893;HRun=0;HaplotypeScore=227.2281;InbreedingCoeff=0.0140;MQ=48.73;MQ0=48;MQRankSum=-6.809;QD=1.17;ReadPosRankSum=-1.462;VQSLOD=2.2544;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,111,2588	0/0:14,0:14:39.13:0,39,963	0/0:30,0:1:3.01:0,3,73	0/0:35,0:4:12.04:0,12,257	0/0:26,0:25:66.23:0,66,1601	0/0:28,0:28:60.20:0,60,1471	0/0:37,0:35:87.15:0,87,1978	0/1:64,0:43:11.58:12,0,1941	0/0:46,0:46:99:0,114,2842	0/0:41,0:40:99:0,99,2256	0/0:22,0:21:39.08:0,39,860	0/1:20,4:23:35.48:35,0,469	0/1:15,6:20:99:192,0,507	0/0:37,0:37:56.06:0,56,1350	0/0:41,0:41:99:0,108,2632	0/0:29,0:29:68.19:0,68,1629	0/0:22,0:19:29.93:0,30,959	0/0:17,0:16:42.14:0,42,969	0/0:24,0:13:29.60:0,30,638	0/0:28,0:28:69.24:0,69,1689	0/0:73,0:71:99:0,138,3217	0/1:16,7:22:64.19:64,0,186	0/1:13,5:18:1.68:2,0,147	0/1:18,1:19:0.01:1,0,0	0/0:19,0:19:36.05:0,36,838	0/0:28,0:28:74.91:0,75,1772	0/0:28,0:28:65.90:0,66,1581	0/0:20,0:19:45.08:0,45,1002
chr10	48166344	.	A	AGT	4310.38	PASS	AB=0.762;AC=9;AF=0.161;AN=56;BaseQRankSum=-3.621;DP=811;FS=9.080;HRun=0;HaplotypeScore=171.5348;InbreedingCoeff=0.7562;MQ=49.49;MQ0=15;MQRankSum=1.340;QD=19.59;ReadPosRankSum=0.290;VQSLOD=4.6834;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:15,38:54:3.70:774,0,4	0/0:14,0:14:36.08:0,36,417	0/0:29,0:6:8.10:0,8,98	0/0:37,0:12:20.57:0,21,244	0/0:21,0:20:47.89:0,48,538	0/0:25,0:25:60.08:0,60,668	0/0:34,0:32:44.39:0,44,635	0/0:42,0:36:45.37:0,45,498	0/0:42,0:42:99:0,108,1181	0/0:40,0:38:47.49:0,47,1006	0/0:15,0:15:33.03:0,33,382	0/0:20,0:20:24.02:0,24,176	0/0:17,0:20:25.93:0,26,222	0/0:41,0:41:62.88:0,63,726	0/0:38,0:38:90.20:0,90,1029	0/0:35,0:35:87.13:0,87,976	0/0:21,0:18:23.79:0,24,450	0/0:13,0:12:34.66:0,35,409	0/1:14,10:20:0.95:381,0,1	1/1:12,14:26:65.81:944,66,0	1/1:53,19:67:53.08:1264,53,0	0/0:17,0:18:12.13:0,12,99	0/0:14,0:14:5.67:0,6,33	0/1:17,0:18:0:0,0,0	0/0:21,0:21:29.29:0,29,326	0/0:30,0:29:60.11:0,60,682	1/1:11,15:26:63:947,63,0	0/0:16,0:16:33.10:0,33,405
chr10	48166383	.	GAGAGAGAA	G	161.75	PASS	AB=0.948;AC=5;AF=0.089;AN=56;BaseQRankSum=3.913;DP=741;FS=3.096;HRun=0;HaplotypeScore=219.8747;InbreedingCoeff=0.4071;MQ=47.91;MQ0=25;MQRankSum=-3.630;QD=3.37;ReadPosRankSum=-1.709;VQSLOD=2.6121;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:43,1:43:72.25:0,72,2948	0/0:15,0:15:45.15:0,45,1891	0/0:53,0:17:39.20:0,39,1715	0/0:55,0:16:38.16:0,38,1203	0/0:21,0:21:42.60:0,43,1395	0/0:23,0:23:66.23:0,66,2697	0/0:31,0:30:78.73:0,79,2956	0/0:14,0:11:32.14:0,32,769	0/0:41,0:41:99:0,123,4630	0/0:33,0:33:90.27:0,90,3147	0/0:17,0:17:27.56:0,28,887	1/1:8,5:12:2.59:139,3,0	0/1:10,1:11:55.74:106,0,56	0/0:40,0:39:99:0,106,3866	0/0:41,0:41:99:0,111,4272	0/0:31,0:31:85.09:0,85,2729	0/0:22,1:21:52.93:0,53,1919	0/0:14,0:13:39.13:0,39,1423	0/0:21,0:19:48.16:0,48,1531	0/0:23,0:23:66.21:0,66,2203	0/0:51,0:50:99:0,105,3176	0/1:11,0:10:10.51:17,0,11	0/0:9,1:9:1.41:0,1,2	0/1:12,1:13:0.02:0,0,1	0/0:20,0:19:25.02:0,25,975	0/0:25,0:24:61.25:0,61,2225	0/0:29,0:28:71.04:0,71,2060	0/0:17,0:17:41.88:0,42,1487
chr10	48166390	.	AAT	A	969.52	PASS	AB=0.929;AC=16;AF=0.286;AN=56;BaseQRankSum=8.417;DP=675;FS=13.168;HRun=0;HaplotypeScore=143.5629;InbreedingCoeff=0.1191;MQ=47.12;MQ0=25;MQRankSum=1.047;QD=3.47;ReadPosRankSum=2.875;VQSLOD=1.6764;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:46:33.49:0,33,871	0/0:14,0:14:41.01:0,41,650	0/0:48,0:18:50.51:0,51,579	0/0:46,0:12:32.24:0,32,345	0/0:14,3:17:17.36:0,17,308	0/0:24,0:24:58.83:0,59,856	0/1:24,1:24:2.26:2,0,897	1/1:17,0:14:19.28:155,19,0	0/0:37,0:36:56.38:0,56,1403	0/0:27,1:28:65.20:0,65,952	0/0:13,1:14:18:0,18,269	1/1:11,0:10:2.68:11,3,0	0/1:11,1:12:25.39:27,0,25	0/0:35,1:35:57.70:0,58,1022	0/0:35,1:36:93.08:0,93,1425	0/1:28,3:31:36.28:280,0,36	0/1:18,1:18:0.54:1,0,569	0/0:15,0:14:29.95:0,30,525	0/1:14,3:15:74.43:74,0,99	0/1:21,0:21:77.78:130,0,78	0/1:49,1:47:33.15:231,0,33	0/1:8,2:9:0.02:0,0,0	0/1:10,0:9:0.05:0,0,0	0/1:8,0:8:0.12:0,0,0	0/0:16,1:16:21.05:0,21,324	0/1:21,3:23:36.88:37,0,691	0/1:20,3:22:41.37:165,0,41	0/0:16,0:16:29.10:0,29,367
chr10	48166391	.	ATG	A	3224.61	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=2.431;DP=674;FS=11.758;HRun=0;HaplotypeScore=137.3100;InbreedingCoeff=0.7370;MQ=46.93;MQ0=26;MQRankSum=0.581;QD=14.27;ReadPosRankSum=-0.858;VQSLOD=3.0318;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:45:5.51:0,6,546	0/0:14,0:14:30.06:0,30,429	0/0:48,0:17:16.30:0,16,301	0/0:45,0:12:6.12:0,6,137	0/1:17,0:17:21.26:21,0,135	0/0:25,0:25:43.66:0,44,612	0/0:26,0:25:29.46:0,29,694	1/1:6,11:14:36.11:428,36,0	0/0:37,0:36:44.08:0,44,1004	0/0:28,0:28:53.60:0,54,548	0/0:14,0:14:11.96:0,12,154	0/1:11,0:10:0.26:0,0,0	1/1:12,0:12:13.99:65,14,0	0/0:36,0:35:46.93:0,47,462	0/0:36,0:36:72.20:0,72,1044	1/1:23,7:30:32.11:825,32,0	0/0:21,0:19:7.62:0,8,319	0/0:15,0:14:34.55:0,35,327	1/1:18,1:16:18.85:233,19,0	1/1:16,4:20:42.09:488,42,0	1/1:44,6:46:75.08:857,75,0	0/1:10,0:9:0:1,0,0	0/1:10,0:9:0:1,0,0	0/1:8,0:8:0:0,0,0	0/0:17,0:16:15.03:0,15,190	0/0:24,0:23:10.33:0,10,348	1/1:19,3:21:42.08:491,42,0	0/0:16,0:16:6.60:0,7,97
chr10	48166401	.	GTGTGTGTA	G	2030.26	PASS	AB=1.000;AC=25;AF=0.446;AN=56;BaseQRankSum=6.707;DP=714;FS=1.792;HRun=0;HaplotypeScore=204.4498;InbreedingCoeff=-0.0496;MQ=45.24;MQ0=35;MQRankSum=-2.454;QD=4.50;ReadPosRankSum=-3.540;VQSLOD=2.2138;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:48:51.25:0,51,1434	0/0:14,0:14:12.04:0,12,757	0/0:39,0:14:13.04:0,13,334	0/1:39,0:9:26.99:27,0,42	0/1:18,0:18:38.23:38,0,77	0/0:24,0:24:28.22:0,28,1362	0/0:29,0:28:51.68:0,52,1420	1/1:29,0:26:5.88:280,6,0	0/0:38,0:37:95.35:0,95,2576	0/1:30,0:29:99:130,0,234	0/0:16,0:15:3.41:0,3,66	1/1:11,3:11:6:62,6,0	1/1:5,6:11:24.82:454,25,0	0/1:37,0:36:99:320,0,115	0/0:32,0:32:69.64:0,70,2185	0/1:36,0:34:54.50:55,0,419	0/1:20,0:18:84.16:192,0,84	0/1:17,0:15:72.76:107,0,73	0/1:21,0:16:44.83:45,0,133	0/1:29,0:29:18.61:19,0,656	0/1:50,0:43:11.68:12,0,739	1/1:10,2:11:3.81:25,4,0	1/1:8,4:10:1.41:2,1,0	1/1:11,2:12:3.01:44,3,0	0/0:20,0:19:18.01:0,18,116	0/1:26,0:25:87.63:206,0,88	0/1:23,0:22:70.28:70,0,456	0/1:14,0:14:2.97:112,0,3
chr10	48166403	.	GTGTGTA	G	3737.50	PASS	AB=0.985;AC=25;AF=0.446;AN=56;BaseQRankSum=6.968;DP=705;FS=0.775;HRun=0;HaplotypeScore=182.1363;InbreedingCoeff=-0.0345;MQ=45.09;MQ0=34;MQRankSum=-3.587;QD=8.46;ReadPosRankSum=-3.253;VQSLOD=1.6094;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:49:39.09:0,39,1067	0/0:13,0:13:12.04:0,12,610	0/0:36,0:14:13:0,13,256	0/1:38,0:8:26.99:27,0,42	0/1:18,1:19:53.84:63,0,54	0/0:24,0:24:11.52:0,12,1067	0/0:30,0:30:51.67:0,52,1104	1/1:28,0:26:47.57:491,48,0	0/0:39,0:38:67.92:0,68,1936	0/1:29,0:28:99:323,0,174	0/0:15,1:15:3.41:0,3,66	1/1:14,0:11:5.71:46,6,0	1/1:12,1:13:27.25:346,27,0	0/1:34,1:34:38.23:682,0,38	0/0:32,0:32:49.37:0,49,1693	0/1:36,0:34:99:232,0,157	0/1:19,0:17:41.75:364,0,42	0/1:17,0:15:68.98:211,0,69	0/1:18,0:14:54.44:54,0,69	0/1:28,0:28:32.50:33,0,374	0/1:51,0:44:85.68:86,0,345	1/1:10,2:11:3.50:25,3,0	1/1:12,0:10:0.47:2,0,0	1/1:13,0:12:2.99:24,3,0	0/0:20,0:19:14.47:0,14,89	0/1:24,1:24:49.21:416,0,49	0/1:23,0:22:96.47:96,0,213	0/1:11,1:12:0.12:216,0,0
chr10	48166405	.	GTGTA	G	2804.59	PASS	AB=0.986;AC=25;AF=0.446;AN=56;BaseQRankSum=8.281;DP=698;FS=3.270;HRun=0;HaplotypeScore=164.3112;InbreedingCoeff=-0.0980;MQ=44.96;MQ0=34;MQRankSum=-5.523;QD=6.16;ReadPosRankSum=-3.602;VQSLOD=1.8961;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:50:30.29:0,30,715	0/0:12,0:12:12.04:0,12,468	0/0:31,0:12:12.94:0,13,193	0/1:35,0:8:26.99:27,0,42	0/1:19,1:20:33.85:42,0,34	0/0:25,0:25:11.07:0,11,773	0/0:30,0:30:51.13:0,51,812	1/1:27,0:25:47.63:410,48,0	0/0:41,0:40:15.90:0,16,1225	0/1:28,0:27:99:130,0,180	0/0:15,1:15:2.94:0,3,66	1/1:14,0:11:5.65:42,6,0	1/1:13,0:13:26.78:263,27,0	0/1:33,1:33:43.69:343,0,44	0/0:33,0:33:28.73:0,29,1180	0/1:36,0:34:31.83:497,0,32	0/1:18,1:17:66.93:179,0,67	0/1:17,0:15:72.84:85,0,73	0/1:17,0:13:19.34:71,0,19	0/1:27,0:27:71.68:72,0,101	0/1:50,0:42:46.37:179,0,46	1/1:12,0:11:2.71:24,3,0	0/1:12,0:10:0.21:1,0,0	1/1:14,0:13:1.74:22,2,0	0/1:19,1:19:7.26:7,0,74	0/1:25,1:25:47.78:278,0,48	0/1:25,0:24:16.01:183,0,16	0/1:9,0:9:0.45:116,0,0
chr10	48166407	.	GTA	G	2329.81	PASS	AB=0.990;AC=32;AF=0.571;AN=56;BaseQRankSum=8.248;DP=690;FS=10.407;HRun=0;HaplotypeScore=150.4293;InbreedingCoeff=0.0694;MQ=45.15;MQ0=34;MQRankSum=-3.101;QD=4.28;ReadPosRankSum=-3.246;VQSLOD=1.4125;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:55,0:51:59.76:60,0,412	0/0:11,0:11:12.04:0,12,323	0/0:29,0:11:12.87:0,13,161	0/1:31,0:8:26.99:27,0,42	0/1:19,1:20:24.22:24,0,61	0/0:24,0:24:4.74:0,5,471	0/0:33,0:32:44.26:0,44,526	1/1:27,0:25:46.67:331,47,0	0/1:40,0:39:35.99:36,0,701	0/1:26,1:26:44.76:45,0,214	0/0:16,0:15:2.94:0,3,66	1/1:14,0:11:8.79:66,9,0	1/1:14,0:14:26.65:184,27,0	0/1:34,0:33:99:100,0,113	0/0:33,0:33:28.45:0,28,783	1/1:36,1:35:28.14:339,28,0	0/1:17,0:16:60.67:61,0,125	0/1:17,0:15:17.20:17,0,100	1/1:17,0:13:1.10:80,1,0	1/1:27,0:27:12.35:158,12,0	1/1:47,0:40:74.77:402,75,0	1/1:13,0:12:5.84:46,6,0	0/1:11,0:9:0.03:0,0,0	1/1:14,0:13:2.12:23,2,0	0/1:19,0:18:7.27:7,0,73	0/1:25,1:25:84.81:117,0,85	1/1:24,1:24:51.58:301,52,0	0/1:10,0:10:5.25:81,0,5
chr10	48166409	.	ATGTGTG	A	3873.90	PASS	AB=0.903;AC=21;AF=0.389;AN=54;BaseQRankSum=-1.666;DP=680;FS=9.119;HRun=0;HaplotypeScore=176.1977;InbreedingCoeff=0.7461;MQ=45.12;MQ0=36;MQRankSum=-3.537;QD=18.10;ReadPosRankSum=-1.217;VQSLOD=2.5684;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:51:43.03:0,43,935	0/0:11,0:10:20.56:0,21,473	0/0:24,0:9:8.99:0,9,112	./.	1/1:17,2:20:4.37:66,4,0	0/0:26,0:26:44.10:0,44,956	0/0:35,0:33:36.51:0,37,743	1/1:26,1:25:12.08:291,12,0	0/0:39,0:38:85.60:0,86,1812	0/1:25,1:27:1.93:528,0,2	0/0:11,5:15:0.46:0,0,1	1/1:12,0:9:1.76:6,2,0	1/1:14,0:14:14.97:209,15,0	1/1:27,3:33:61.62:1027,62,0	0/0:33,0:33:59.48:0,59,1450	0/0:36,0:34:45.77:0,46,459	1/1:17,1:16:33.04:511,33,0	1/1:15,2:15:24:392,24,0	0/0:18,0:13:14.38:0,14,174	0/0:27,0:27:39.18:0,39,718	0/0:46,0:39:61.43:0,61,843	0/0:12,0:10:0.02:0,0,1	1/1:9,0:7:0.94:2,1,0	0/0:15,0:14:5.52:0,6,50	0/0:18,0:17:3.93:0,4,24	1/1:13,11:24:27.26:606,27,0	0/0:24,0:23:3.70:0,4,455	1/1:9,0:9:12.50:236,13,0
chr10	48166426	.	TGTGTGTGA	T	3680.79	PASS	AB=0.998;AC=15;AF=0.278;AN=54;BaseQRankSum=-1.168;DP=667;FS=5.041;HRun=0;HaplotypeScore=194.3160;InbreedingCoeff=-0.2654;MQ=45.19;MQ0=30;MQRankSum=-1.495;QD=11.15;ReadPosRankSum=0.722;VQSLOD=2.5908;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:45:57.52:0,58,1190	0/0:9,0:8:17.41:0,17,485	0/0:9,0:4:8.99:0,9,112	./.	0/1:20,0:20:51.86:52,0,59	0/0:25,0:25:56.56:0,57,1146	0/0:41,0:37:35.09:0,35,816	0/1:30,0:29:66.77:266,0,67	0/0:40,0:40:99:0,100,2264	0/1:29,0:27:26.47:594,0,26	1/1:12,0:11:5.66:37,6,0	0/0:14,0:11:8.24:0,8,118	0/1:20,0:20:99:191,0,160	0/1:42,0:41:99:944,0,109	0/0:34,0:33:7.23:0,7,1598	0/0:32,0:30:32.09:0,32,604	0/1:20,0:18:43.22:423,0,43	0/1:13,0:11:41.91:364,0,42	0/1:15,0:12:63.85:64,0,138	0/0:27,0:27:22.62:0,23,874	0/1:55,0:47:34.89:35,0,751	0/0:17,0:15:15.09:0,15,123	0/0:13,0:10:2.13:0,2,21	0/1:18,0:17:4.67:5,0,113	0/0:6,12:18:4.20:0,4,67	0/1:24,0:23:99:520,0,142	0/1:22,0:20:38.18:38,0,528	0/1:9,0:8:44.52:147,0,45
chr10	48166432	.	TGA	T	684.44	PASS	AB=0.986;AC=17;AF=0.327;AN=52;BaseQRankSum=0.376;DP=652;FS=14.489;HRun=0;HaplotypeScore=151.6464;InbreedingCoeff=-0.0228;MQ=45.26;MQ0=29;MQRankSum=0.999;QD=1.80;ReadPosRankSum=-0.269;VQSLOD=1.9167;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:47,0:43:6.13:6,0,175	0/0:9,0:8:1.01:0,1,19	./.	./.	0/1:20,0:20:11.48:11,0,61	0/0:24,0:24:3.84:0,4,226	0/0:37,3:36:1.46:0,1,98	0/0:31,0:29:14.88:0,15,105	0/0:39,0:39:12.91:0,13,407	0/1:30,0:27:36.85:90,0,37	1/1:12,0:11:8.67:62,9,0	0/0:14,0:11:12:0,12,119	0/0:21,0:21:26.53:0,27,181	0/1:40,0:38:19.86:20,0,160	0/1:34,0:33:79.11:79,0,230	0/1:27,0:25:3.05:3,0,165	0/1:18,0:16:27:27,0,68	0/1:13,0:11:30.86:31,0,56	1/1:15,0:14:17.30:125,17,0	0/1:27,0:27:51.97:52,0,175	1/1:52,0:44:34.92:234,35,0	0/0:22,0:20:20.92:0,21,163	0/0:13,0:10:2.99:0,3,23	0/1:20,1:20:42.71:43,0,103	0/0:19,0:18:8.64:0,9,64	0/0:26,0:26:11.02:0,11,227	0/1:21,2:22:4.60:58,0,5	0/0:9,0:8:11.28:0,11,71
chr10	48166537	.	CG	C	5414.93	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=7.846;DP=815;FS=11.448;HRun=1;HaplotypeScore=104.8404;InbreedingCoeff=0.9998;MQ=85.98;MQ0=0;MQRankSum=1.958;QD=39.24;ReadPosRankSum=2.181;VQSLOD=4.1515;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,147,2314	0/0:14,0:14:42.14:0,42,671	0/0:27,1:28:68.21:0,68,1080	0/0:32,0:32:85.18:0,85,1249	0/0:28,0:27:81.28:0,81,1291	0/0:18,0:18:51.17:0,51,814	0/0:25,0:25:72.20:0,72,1117	0/0:46,0:46:99:0,132,2105	0/0:34,0:34:99:0,102,1574	0/0:38,0:38:99:0,114,1774	0/0:25,0:25:75.24:0,75,1170	0/0:27,0:26:72.24:0,72,1130	0/0:21,0:21:57.18:0,57,885	0/0:31,0:31:87.30:0,87,1383	0/0:31,0:31:93.32:0,93,1485	1/1:1,24:25:27.28:887,27,0	0/0:32,0:32:96.29:0,96,1464	0/0:21,0:21:57.19:0,57,909	1/1:0,20:20:57.06:796,57,0	1/1:0,21:21:60.20:839,60,0	1/1:1,45:46:99:1844,132,0	0/0:31,0:31:90.30:0,90,1411	0/0:30,0:30:72.25:0,72,1148	0/0:37,0:37:93.32:0,93,1479	0/0:30,0:30:87.30:0,87,1389	0/0:30,0:30:87.28:0,87,1367	1/1:0,26:26:75.25:1049,75,0	0/0:15,0:15:45.15:0,45,707
chr10	48166621	.	GC	G	782.89	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.364;DP=761;FS=2.733;HRun=2;HaplotypeScore=83.9726;InbreedingCoeff=0.9994;MQ=81.98;MQ0=0;MQRankSum=-0.971;QD=26.10;ReadPosRankSum=1.227;VQSLOD=3.5349;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:61,0:61:99:0,180,2584	0/0:13,0:13:36.11:0,36,520	0/0:22,0:22:63.13:0,63,862	0/0:24,0:24:66.19:0,66,946	0/0:19,0:19:54.16:0,54,759	0/0:20,0:20:60.06:0,60,826	0/0:28,0:28:78.24:0,78,1124	0/0:35,0:35:99:0,105,1515	0/0:26,0:26:78.19:0,78,1102	0/0:29,0:29:87.28:0,87,1268	0/0:26,0:26:78.23:0,78,1111	0/0:20,0:19:54.09:0,54,758	0/0:22,0:22:66.15:0,66,927	0/0:29,0:29:81.19:0,81,1160	0/0:38,0:38:99:0,108,1562	1/1:2,28:29:30.28:877,30,0	0/0:43,0:43:99:0,126,1841	0/0:21,0:21:63.21:0,63,937	0/0:22,0:22:63.18:0,63,882	0/0:18,0:18:51.17:0,51,757	0/0:36,0:36:99:0,99,1413	0/0:20,0:20:57.15:0,57,826	0/0:32,0:32:87.09:0,87,1190	0/0:31,0:31:81.26:0,81,1192	0/0:26,0:26:78.26:0,78,1163	0/0:26,0:26:78.25:0,78,1144	0/0:28,0:28:71.92:0,72,1064	0/0:16,0:16:48.15:0,48,698
chr10	48166948	.	A	AAT	5179.27	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=13.747;DP=703;FS=4.390;HRun=0;HaplotypeScore=86.9128;InbreedingCoeff=1.0000;MQ=87.70;MQ0=0;MQRankSum=-3.064;QD=44.65;ReadPosRankSum=4.390;VQSLOD=6.4808;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,117,1871	0/0:15,0:15:45.15:0,45,734	0/0:25,0:25:69.23:0,69,1097	0/0:24,0:24:72.22:0,72,1140	0/0:21,0:21:63.21:0,63,1019	0/0:21,0:21:60.19:0,60,953	0/0:21,0:21:63.20:0,63,998	0/0:38,0:38:99:0,105,1631	0/0:32,0:32:96.33:0,96,1557	0/0:21,0:21:63.21:0,63,1007	0/0:22,0:22:66.21:0,66,1049	1/1:0,26:27:69.24:1337,69,0	1/1:0,18:18:51.17:983,51,0	0/0:21,0:21:63.22:0,63,1027	0/0:38,0:38:99:0,114,1807	0/0:42,0:42:99:0,120,1923	0/0:31,0:31:93.32:0,93,1510	0/0:13,0:13:39.13:0,39,636	0/0:20,0:20:60.19:0,60,928	0/0:18,0:18:54.17:0,54,853	0/0:30,0:30:90.29:0,90,1441	1/1:0,22:22:54.18:1001,54,0	1/1:0,21:21:41.81:812,42,0	1/1:0,28:28:54.19:1046,54,0	0/0:16,0:16:48.16:0,48,783	0/0:32,0:32:96.30:0,96,1517	0/0:29,0:29:87.28:0,87,1381	0/0:15,0:15:45.10:0,45,644
chr10	48167444	.	TTGTG	T	1845.38	PASS	AB=0.883;AC=11;AF=0.196;AN=56;BaseQRankSum=2.431;DP=791;FS=12.486;HRun=0;HaplotypeScore=156.3461;InbreedingCoeff=0.5546;MQ=72.07;MQ0=8;MQRankSum=2.736;QD=8.83;ReadPosRankSum=1.809;VQSLOD=2.4325;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:30:16.58:0,17,676	0/0:11,0:11:15.02:0,15,310	0/0:56,0:30:0.89:0,1,2	0/1:57,0:31:8.60:9,0,49	0/0:27,0:27:5.61:0,6,48	0/0:18,0:19:34.07:0,34,639	0/0:26,0:29:44.61:0,45,865	0/1:20,0:20:18.05:18,0,81	0/0:27,0:32:70.96:0,71,1174	0/0:32,0:30:35.95:0,36,568	0/0:14,0:13:5.99:0,6,50	1/1:12,14:26:29.66:458,30,0	1/1:5,14:21:26.82:390,27,0	0/0:36,0:36:21.70:0,22,183	0/0:28,0:31:50.87:0,51,1039	0/0:16,0:27:8.62:0,9,99	0/0:35,0:36:35.29:0,35,506	0/0:12,0:16:17.88:0,18,195	0/0:15,0:17:13.26:0,13,166	0/0:14,0:24:10.41:0,10,139	0/0:30,0:47:20.96:0,21,195	1/1:11,12:23:23.99:363,24,0	1/1:12,10:22:4.30:268,4,0	0/1:18,20:39:12.02:500,0,12	0/0:19,0:19:9:0,9,80	0/0:29,0:35:60.15:0,60,976	0/0:23,0:23:24.90:0,25,348	0/0:17,0:16:22.59:0,23,252
chr10	48169001	.	TGACCCTGCAGAAGGC	T	5110.23	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=9.971;DP=541;FS=10.099;HRun=0;HaplotypeScore=223.1212;InbreedingCoeff=0.9907;MQ=87.60;MQ0=0;MQRankSum=-10.359;QD=60.12;ReadPosRankSum=3.879;VQSLOD=3.4435;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:90.30:0,90,5907	0/0:7,0:7:18.06:0,18,1122	0/0:20,0:20:39.13:0,39,1851	0/0:20,0:20:48.15:0,48,2245	0/0:16,0:16:27.09:0,27,1627	0/0:17,0:17:42.14:0,42,2660	0/0:20,0:20:51.14:0,51,2791	0/0:21,0:21:42.14:0,42,2680	0/0:15,0:15:33.11:0,33,2110	0/0:20,0:20:45.11:0,45,2626	0/0:10,0:10:27.09:0,27,1696	1/1:6,15:21:36.12:1533,36,0	1/1:7,11:18:30.10:1277,30,0	0/0:22,0:22:60.21:0,60,3949	0/0:24,0:24:54.19:0,54,3595	0/0:13,0:13:30.10:0,30,2074	0/0:23,0:22:66.23:0,66,4323	0/0:24,0:24:63.22:0,63,4214	0/0:26,0:26:48.16:0,48,2867	0/0:25,0:25:54.19:0,54,3467	0/0:24,0:24:66.23:0,66,4493	1/1:5,10:15:21.07:894,21,0	1/1:3,9:12:15.05:639,15,0	1/1:7,12:19:18.06:767,18,0	0/0:17,0:17:51.18:0,51,3501	0/0:20,0:20:42.14:0,42,2821	0/0:21,0:21:57.20:0,57,3724	0/0:14,0:14:39.13:0,39,2653
chr10	48169956	.	T	TAGAGCGC	229.15	PASS	AB=0.847;AC=3;AF=0.054;AN=56;BaseQRankSum=3.438;DP=397;FS=4.517;HRun=0;HaplotypeScore=97.8224;InbreedingCoeff=-0.0706;MQ=63.66;MQ0=2;MQRankSum=-3.179;QD=8.18;ReadPosRankSum=2.992;VQSLOD=1.5395;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,99,2643	0/0:1,0:1:3.01:0,3,84	0/0:21,0:15:39.13:0,39,982	0/0:15,0:15:42.14:0,42,1052	0/0:13,0:13:39.12:0,39,1026	0/0:19,0:19:54.17:0,54,1451	0/0:19,0:19:57.20:0,57,1501	0/0:38,0:38:99:0,108,2894	0/0:13,0:13:39.12:0,39,1030	0/0:12,0:12:36.10:0,36,813	0/0:10,0:10:30.10:0,30,835	0/0:8,0:8:9.03:0,9,251	0/0:13,0:13:39.13:0,39,1090	0/0:11,0:11:27.09:0,27,755	0/0:12,0:12:36.12:0,36,976	0/0:14,0:14:42.14:0,42,1154	0/0:26,0:26:72.25:0,72,1976	0/0:26,0:26:60.19:0,60,1578	0/1:13,2:14:99:163,0,912	0/1:2,1:3:92.32:92,0,158	0/0:3,0:3:9.03:0,9,252	0/0:5,0:5:12.04:0,12,336	0/0:6,0:6:18.06:0,18,503	0/0:5,0:5:12:0,12,268	0/0:14,0:14:42.14:0,42,1175	0/0:19,0:19:57.19:0,57,1495	0/1:9,1:10:73.73:74,0,725	0/0:11,0:11:27.09:0,27,755
chr10	48169957	.	T	TCGCCTAGGAAGC	486.99	PASS	AB=0.854;AC=3;AF=0.054;AN=56;BaseQRankSum=3.400;DP=396;FS=4.533;HRun=0;HaplotypeScore=137.1493;InbreedingCoeff=-0.0705;MQ=63.53;MQ0=2;MQRankSum=-3.217;QD=15.71;ReadPosRankSum=2.221;VQSLOD=2.5537;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,102,3740	0/0:1,0:1:3.01:0,3,119	0/0:19,0:14:39.13:0,39,1278	0/0:14,0:14:39.13:0,39,1355	0/0:12,0:12:36.12:0,36,1395	0/0:19,0:19:57.17:0,57,2033	0/0:19,0:19:57.20:0,57,2096	0/0:39,0:39:99:0,111,4050	0/0:13,0:13:39.12:0,39,1415	0/0:12,0:12:33.11:0,33,1105	0/0:10,0:10:30.10:0,30,1177	0/0:8,0:8:9.03:0,9,356	0/0:13,0:13:39.13:0,39,1542	0/0:11,0:11:27.09:0,27,1058	0/0:12,0:12:36.12:0,36,1385	0/0:14,0:14:42.14:0,42,1599	0/0:26,0:26:72.25:0,72,2688	0/0:26,0:26:60.21:0,60,2158	0/1:15,2:15:99:291,0,1299	0/1:2,1:3:99:156,0,228	0/0:3,0:3:9.03:0,9,356	0/0:5,0:5:12.04:0,12,464	0/0:6,0:6:18.06:0,18,691	0/0:5,0:5:12.51:0,13,369	0/0:14,0:14:42.14:0,42,1621	0/0:18,0:18:54.18:0,54,1956	0/1:10,1:11:99:139,0,1039	0/0:11,0:11:27.09:0,27,1068
chr10	48169993	.	G	GA	1434.09	PASS	AB=0.840;AC=27;AF=0.500;AN=54;BaseQRankSum=1.706;DP=398;FS=27.288;HRun=13;HaplotypeScore=69.7243;InbreedingCoeff=0.5664;MQ=70.63;MQ0=0;MQRankSum=-0.775;QD=6.58;ReadPosRankSum=-2.749;VQSLOD=-0.1815;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:43:32.04:0,32,431	0/0:1,0:2:2.04:0,2,6	0/0:14,0:10:8.68:0,9,60	0/0:17,0:13:13.52:0,14,78	1/1:9,3:13:4.12:159,4,0	0/0:15,1:18:2.95:0,3,148	0/0:14,0:14:28.75:0,29,191	0/0:25,1:29:5.96:0,6,168	0/1:16,0:16:1.70:2,0,102	0/1:5,6:12:21.10:123,0,21	1/1:7,5:12:8.96:75,9,0	1/1:6,0:13:12.77:64,13,0	1/1:18,0:19:32.40:206,32,0	1/1:6,5:11:4.36:31,4,0	0/0:9,0:10:10.85:0,11,67	0/0:10,0:13:30.71:0,31,189	1/1:8,16:27:6.17:236,6,0	1/1:9,21:33:17.30:309,17,0	0/1:13,1:16:2.97:3,0,96	0/1:2,0:2:0:0,0,0	0/0:5,0:6:16.91:0,17,109	./.	1/1:5,0:6:13.82:71,14,0	1/1:2,0:6:7.72:35,8,0	1/1:0,7:8:11.08:133,11,0	1/1:6,6:13:5.16:73,5,0	0/0:12,0:12:17.71:0,18,123	0/1:3,7:10:3.78:96,0,4
chr10	48170175	.	T	TG	965.45	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=0.596;DP=299;FS=13.634;HRun=2;HaplotypeScore=38.9161;InbreedingCoeff=0.9534;MQ=94.48;MQ0=1;MQRankSum=-2.439;QD=29.26;ReadPosRankSum=0.402;VQSLOD=1.7121;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:72.19:0,72,855	0/0:4,0:4:12.04:0,12,149	0/0:22,0:20:26.33:0,26,316	0/0:15,0:15:28.20:0,28,299	0/0:12,0:12:33.06:0,33,356	0/0:13,0:13:39.12:0,39,483	0/0:15,0:15:45.13:0,45,536	0/0:16,0:16:45.09:0,45,513	0/0:9,0:9:27.08:0,27,323	0/0:6,0:6:18.06:0,18,223	0/0:13,0:13:36.09:0,36,415	1/1:0,8:8:18.06:258,18,0	1/1:1,6:7:15.05:215,15,0	0/0:7,0:7:21.07:0,21,260	0/0:6,0:6:18.05:0,18,212	0/0:9,0:9:24.06:0,24,285	0/0:13,0:13:39.04:0,39,439	0/0:12,0:12:36.08:0,36,419	0/0:12,0:12:33.08:0,33,394	0/0:5,0:5:15.02:0,15,161	0/0:17,0:17:51.07:0,51,600	1/1:0,3:3:8.94:103,9,0	1/1:0,5:5:15.05:214,15,0	1/1:1,9:10:24.08:344,24,0	0/0:5,0:5:15.05:0,15,186	0/0:13,0:13:36.11:0,36,446	0/0:10,0:10:24.08:0,24,297	0/0:6,0:6:18.06:0,18,223
chr10	48170252	.	CCCA	C	223.23	PASS	AC=10;AF=0.192;AN=52;BaseQRankSum=2.598;DP=107;FS=4.285;HRun=0;HaplotypeScore=28.7634;InbreedingCoeff=0.4364;MQ=93.60;MQ0=1;MQRankSum=-3.191;QD=13.13;ReadPosRankSum=-0.608;VQSLOD=2.6707;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:21.05:0,21,326	./.	0/0:11,0:9:20.95:0,21,251	0/0:8,1:7:9.03:0,9,142	0/0:3,0:1:3.01:0,3,65	0/0:2,0:2:6.02:0,6,107	0/0:7,0:6:14.60:0,15,278	0/0:8,0:8:18.05:0,18,353	0/0:4,0:4:12.02:0,12,218	0/0:3,0:3:6.02:0,6,128	0/0:3,0:3:3.48:0,3,63	1/1:3,1:4:1.59:82,2,0	1/1:1,2:3:7.58:106,8,0	0/0:1,0:1:3.01:0,3,65	0/0:1,0:1:2.99:0,3,23	0/0:4,0:4:10.59:0,11,198	0/0:2,0:2:5.61:0,6,75	0/0:1,0:1:3.01:0,3,64	0/0:1,0:1:2.96:0,3,19	1/1:2,0:2:0.89:2,1,0	0/0:5,0:5:6.01:0,6,90	./.	1/1:2,0:2:4.83:53,5,0	1/1:3,3:6:5.51:101,6,0	0/0:1,0:1:3.01:0,3,65	0/0:4,0:4:12.03:0,12,210	0/0:2,0:2:3.48:0,3,66	0/0:5,0:5:15.05:0,15,325
chr10	48171691	.	AGTGT	A	2430.22	PASS	AB=0.719;AC=7;AF=0.130;AN=54;BaseQRankSum=4.916;DP=531;FS=9.990;HRun=0;HaplotypeScore=102.5881;InbreedingCoeff=0.7657;MQ=60.51;MQ0=8;MQRankSum=2.886;QD=26.71;ReadPosRankSum=2.384;VQSLOD=3.0915;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:41.33:0,41,963	0/0:11,0:11:15.05:0,15,367	0/0:25,0:13:13.59:0,14,237	0/0:12,0:7:11.77:0,12,227	0/0:19,0:19:36.12:0,36,870	0/0:17,0:17:36.11:0,36,833	0/0:15,0:15:27.05:0,27,576	0/0:20,0:25:37.90:0,38,505	0/0:10,0:12:29.57:0,30,576	0/0:32,0:32:72.25:0,72,1662	0/0:23,0:23:48.16:0,48,1116	0/0:7,0:20:36.12:0,36,623	0/0:8,0:17:18.06:0,18,314	0/0:16,0:16:32.32:0,32,708	0/0:11,0:11:24.08:0,24,561	0/0:4,0:23:49.42:0,49,281	0/0:27,0:28:51.13:0,51,1129	0/0:25,0:27:62.68:0,63,1357	0/1:14,9:22:14.94:415,0,15	1/1:4,13:16:39.07:588,39,0	1/1:5,17:22:42.14:694,42,0	./.	0/0:4,0:4:3:0,3,44	0/0:6,0:12:11.46:0,11,152	0/0:14,0:14:38.87:0,39,878	0/0:20,0:22:53.75:0,54,1178	1/1:10,19:29:54.18:881,54,0	0/0:27,0:27:68.72:0,69,1627
chr10	48171970	.	A	AATAT	1081.04	PASS	AC=8;AF=0.148;AN=54;BaseQRankSum=-5.350;DP=479;FS=0.000;HRun=0;HaplotypeScore=75.9301;InbreedingCoeff=0.9194;MQ=72.94;MQ0=0;MQRankSum=-0.816;QD=43.24;ReadPosRankSum=1.914;VQSLOD=3.4578;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:51.17:0,51,871	0/0:18,0:18:48.16:0,48,817	0/0:16,0:16:17.53:0,18,443	0/0:9,0:9:18.06:0,18,314	0/0:23,0:23:63.19:0,63,1032	0/0:29,0:29:81.28:0,81,1407	0/0:5,0:5:15.05:0,15,259	0/0:48,0:48:99:0,123,2002	0/0:14,0:14:42.14:0,42,736	0/0:19,0:19:51.16:0,51,841	0/0:32,0:32:84.27:0,84,1434	1/1:4,8:12:21.07:535,21,0	1/1:2,5:7:12.04:306,12,0	0/0:11,0:11:33.11:0,33,573	0/0:21,0:21:45.15:0,45,786	0/0:16,0:16:42.13:0,42,706	0/0:13,0:13:30.10:0,30,526	0/0:13,0:13:27.09:0,27,467	0/0:18,0:18:42.14:0,42,707	0/0:33,0:33:78.25:0,78,1324	0/0:17,0:17:42.14:0,42,736	1/1:0,1:1:3.01:77,3,0	1/1:1,4:5:12.04:306,12,0	./.	0/0:10,0:10:30.10:0,30,526	0/0:24,0:24:69.23:0,69,1168	0/0:33,0:33:84.28:0,84,1419	0/0:12,0:12:33.11:0,33,565
chr10	48172398	.	CAA	C	6586.27	PASS	AB=0.690;AC=31;AF=0.554;AN=56;BaseQRankSum=-0.302;DP=681;FS=28.476;HRun=12;HaplotypeScore=101.8332;InbreedingCoeff=0.7851;MQ=71.99;MQ0=6;MQRankSum=-0.362;QD=16.22;ReadPosRankSum=7.663;VQSLOD=1.2583;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:31:88.13:0,88,1025	0/0:15,0:17:44.11:0,44,578	0/0:23,0:17:31.53:0,32,230	0/1:19,1:15:21.70:22,0,153	1/1:6,17:25:26.81:404,27,0	0/0:23,1:24:26.56:0,27,602	0/0:14,0:16:41.11:0,41,534	0/0:18,0:26:33.01:0,33,160	0/0:29,0:29:39.97:0,40,597	1/1:7,26:33:69.03:701,69,0	0/1:8,20:29:1.64:331,0,2	1/1:2,17:20:41.83:409,42,0	1/1:8,15:24:38.69:376,39,0	1/1:7,25:31:45.01:458,45,0	0/0:31,0:32:86.73:0,87,1156	1/1:4,16:19:30.03:303,30,0	1/1:2,27:28:63.14:641,63,0	1/1:2,19:22:38.80:449,39,0	0/0:4,1:17:8.33:0,8,144	0/0:12,0:29:59.93:0,60,381	0/0:11,1:27:5.25:0,5,112	1/1:9,11:20:26.13:270,26,0	1/1:5,14:19:19.82:238,20,0	1/1:3,21:26:41.54:532,42,0	1/1:8,14:22:11.09:338,11,0	1/1:4,22:28:52.09:626,52,0	0/1:4,1:15:10.78:11,0,53	1/1:3,17:21:41.79:479,42,0
chr10	48173663	.	C	CATT	601.18	PASS	AB=1.000;AC=20;AF=0.357;AN=56;BaseQRankSum=4.314;DP=247;FS=14.576;HRun=0;HaplotypeScore=47.6708;InbreedingCoeff=0.6420;MQ=70.54;MQ0=1;MQRankSum=-1.723;QD=6.26;ReadPosRankSum=-3.266;VQSLOD=-0.3080;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:33.11:0,33,503	0/0:7,0:7:21.07:0,21,334	0/0:4,0:4:6.02:0,6,99	0/0:8,0:8:24.02:0,24,300	0/0:12,0:12:1.41:0,1,3	0/0:6,0:6:15.05:0,15,242	0/0:5,0:5:15.05:0,15,239	0/0:33,0:32:90.28:0,90,1320	0/0:9,0:9:24.02:0,24,289	1/1:9,0:9:6.73:93,7,0	0/1:4,0:4:0:0,0,0	0/1:5,0:5:0.05:0,0,0	0/1:6,0:8:17.19:17,0,27	0/1:2,0:2:0.01:0,0,0	0/0:10,0:10:30.09:0,30,454	1/1:5,7:12:5.95:113,6,0	1/1:7,7:13:2.92:56,3,0	1/1:12,0:13:15.41:153,15,0	0/0:14,0:14:42.14:0,42,672	0/0:11,0:11:24.08:0,24,369	0/0:4,0:4:12.04:0,12,192	1/1:4,0:4:6.46:51,6,0	0/0:4,0:4:0.45:0,0,1	0/0:2,0:2:0:0,0,0	1/1:6,0:6:12.47:118,12,0	1/1:9,0:11:9.59:127,10,0	0/0:8,0:8:18.06:0,18,274	1/1:5,0:7:2.93:38,3,0
chr10	48173666	.	CATT	C	499.46	PASS	AC=20;AF=0.500;AN=40;BaseQRankSum=-3.428;DP=236;FS=13.716;HRun=0;HaplotypeScore=43.7416;InbreedingCoeff=0.5432;MQ=68.98;MQ0=1;MQRankSum=2.614;QD=6.32;ReadPosRankSum=1.878;VQSLOD=0.3251;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:10,2:12:3.01:39,3,0	1/1:6,1:7:3.01:39,3,0	./.	./.	0/0:13,0:13:5.99:0,6,51	1/1:2,4:6:9.03:118,9,0	./.	./.	1/1:6,1:7:3.01:39,3,0	0/0:9,0:9:3.01:0,3,41	0/0:4,0:4:3.01:0,3,37	./.	1/1:5,0:7:5.95:42,6,0	0/0:3,0:3:6.01:0,6,82	1/1:9,1:10:3.01:39,3,0	0/0:9,0:9:12.03:0,12,153	0/0:14,0:13:3.01:0,3,39	0/0:14,0:13:17.95:0,18,184	1/1:10,4:14:12.04:157,12,0	./.	1/1:2,2:4:6.02:78,6,0	./.	1/1:4,0:4:2.68:11,3,0	./.	0/0:5,0:5:2.97:0,3,20	0/0:10,0:10:9.03:0,9,117	1/1:4,4:8:6.02:78,6,0	0/0:8,0:8:5.85:0,6,53
chr10	48173862	.	AAAAC	A	1424.39	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.555;DP=504;FS=5.176;HRun=0;HaplotypeScore=80.9837;InbreedingCoeff=0.9899;MQ=68.79;MQ0=0;MQRankSum=-3.796;QD=35.61;ReadPosRankSum=-3.914;VQSLOD=2.3791;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,108,2659	0/0:6,0:6:18.06:0,18,423	0/0:22,0:22:61.45:0,61,1362	0/0:17,0:17:45.63:0,46,1138	0/0:10,0:10:27.09:0,27,683	0/0:14,0:14:42.14:0,42,1026	0/0:18,0:18:45.15:0,45,1070	1/1:10,30:40:90.31:1519,90,0	0/0:13,0:13:33.11:0,33,743	0/0:16,0:16:42.14:0,42,1053	0/0:11,0:11:33.11:0,33,784	0/0:19,0:19:45.15:0,45,1142	0/0:15,0:15:39.13:0,39,990	0/0:12,0:12:36.12:0,36,850	0/0:19,0:19:54.19:0,54,1350	0/0:18,0:18:51.17:0,51,1222	0/0:17,0:17:45.15:0,45,1075	0/0:28,0:28:75.26:0,75,1829	0/0:18,0:18:42.13:0,42,877	0/0:12,0:12:36.12:0,36,878	0/0:25,0:25:75.26:0,75,1743	0/0:14,0:14:42.13:0,42,1014	0/0:13,0:13:39.13:0,39,990	0/0:24,0:24:69.24:0,69,1667	0/0:13,0:13:39.13:0,39,946	0/0:24,0:24:69.24:0,69,1633	0/0:16,0:16:42.14:0,42,990	0/0:13,0:13:39.13:0,39,939
chr10	48179393	.	A	ATC	1937.01	PASS	AB=0.893;AC=39;AF=0.750;AN=52;BaseQRankSum=4.846;DP=784;FS=6.013;HRun=0;HaplotypeScore=132.3443;InbreedingCoeff=0.4547;MQ=65.31;MQ0=30;MQRankSum=-2.740;QD=3.74;ReadPosRankSum=-0.146;VQSLOD=2.3431;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:19,14:35:9.82:256,0,10	0/1:17,0:17:48.51:102,0,49	0/0:83,0:30:3:0,3,29	0/0:96,0:28:2.76:0,3,15	1/1:20,0:19:2.81:41,3,0	0/0:27,0:27:18.05:0,18,199	0/0:9,0:9:12.03:0,12,133	1/1:45,0:45:17.14:110,17,0	0/0:14,0:15:20.21:0,20,165	1/1:26,0:21:22.80:196,23,0	1/1:25,0:18:7.08:42,7,0	1/1:25,0:24:11.63:56,12,0	1/1:23,0:22:12.85:78,13,0	1/1:16,0:16:9.61:55,10,0	1/1:29,0:29:29.64:266,30,0	0/1:25,0:23:21.42:52,0,21	1/1:25,0:21:24.65:138,25,0	1/1:14,0:13:12.04:170,12,0	1/1:21,0:21:13.98:120,14,0	./.	./.	1/1:32,0:28:3.87:25,4,0	1/1:31,0:30:2.75:7,3,0	1/1:19,0:19:5.59:37,6,0	1/1:29,0:27:12.70:61,13,0	1/1:22,0:21:26.40:186,26,0	1/1:19,0:18:8.70:74,9,0	1/1:19,0:17:6.53:27,7,0
chr10	48179428	.	TC	T	1443.37	PASS	AB=0.939;AC=25;AF=0.446;AN=56;BaseQRankSum=6.550;DP=620;FS=1.001;HRun=1;HaplotypeScore=120.2106;InbreedingCoeff=-0.1465;MQ=40.22;MQ0=61;MQRankSum=-0.668;QD=3.19;ReadPosRankSum=-0.603;VQSLOD=-0.2861;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:32,0:31:86.70:87,0,188	0/0:13,0:13:15.41:0,15,195	0/0:29,0:3:3.01:0,3,48	0/0:42,0:7:13.57:0,14,150	0/0:13,0:9:3.60:0,4,11	0/1:12,8:18:55.95:56,0,242	0/0:14,4:17:24.04:0,24,298	0/1:26,0:12:56.72:60,0,57	0/1:14,6:18:53.99:54,0,226	0/1:26,0:17:51.60:131,0,52	1/1:31,0:22:21.76:110,22,0	1/1:23,0:22:17.06:108,17,0	0/1:23,0:22:56:99,0,56	0/1:16,0:16:38.46:38,0,42	0/1:22,0:22:6.88:7,0,22	0/1:19,9:26:25.06:224,0,25	0/1:28,0:24:54.42:139,0,54	0/1:9,1:9:2.20:65,0,2	0/1:18,0:18:8.88:9,0,426	0/0:18,0:15:2.82:0,3,17	0/0:9,1:8:6.02:0,6,81	1/1:21,0:18:8.60:41,9,0	0/1:31,0:30:26.09:26,0,183	0/1:13,1:14:31.07:32,0,31	1/1:27,0:24:22.83:166,23,0	0/1:23,0:21:47.07:97,0,47	0/0:23,0:22:6.84:0,7,562	1/1:14,0:12:8.93:65,9,0
chr10	48179432	.	CTA	C	76.26	PASS	AB=0.988;AC=16;AF=0.286;AN=56;BaseQRankSum=7.426;DP=593;FS=0.612;HRun=0;HaplotypeScore=129.7431;InbreedingCoeff=-0.0328;MQ=39.44;MQ0=62;MQRankSum=-3.902;QD=0.28;ReadPosRankSum=-1.446;VQSLOD=2.3553;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:30:36.08:0,36,405	0/0:11,2:13:23.27:0,23,277	0/0:23,0:3:2.98:0,3,21	0/1:28,2:5:26.42:26,0,69	0/0:16,0:12:15.83:0,16,125	0/0:18,0:16:21.07:0,21,324	0/0:19,0:18:27.08:0,27,393	0/1:22,0:8:13.41:13,0,27	0/0:21,0:19:29.89:0,30,419	0/0:26,0:17:0.62:0,1,484	0/0:28,0:19:5.50:0,6,327	1/1:21,0:20:7.67:47,8,0	0/1:25,0:24:9.27:9,0,47	0/1:15,0:16:16.27:16,0,52	0/0:16,2:19:18.22:0,18,124	0/1:28,0:26:12.80:13,0,216	0/1:26,0:22:14.17:21,0,14	0/1:11,0:10:21.94:22,0,184	0/0:18,0:18:21.96:0,22,517	1/1:18,0:14:1.67:4,2,0	0/0:10,0:8:6.02:0,6,116	0/1:25,0:21:9.15:9,0,181	0/0:30,0:29:10.76:0,11,244	0/1:13,0:13:14.32:14,0,44	0/0:28,0:25:12.98:0,13,591	0/1:21,0:18:22.52:23,0,90	0/0:22,0:21:23.55:0,24,842	1/1:14,0:12:4.06:10,4,0
chr10	48179475	.	TCTAC	T	727.48	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=6.681;DP=601;FS=0.563;HRun=0;HaplotypeScore=131.1372;InbreedingCoeff=0.4682;MQ=64.57;MQ0=16;MQRankSum=-0.858;QD=6.67;ReadPosRankSum=0.485;VQSLOD=2.7692;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:74.79:0,75,767	0/0:14,0:14:26.99:0,27,313	0/0:30,0:25:47.88:0,48,579	0/0:13,0:10:16.36:0,16,243	0/0:20,0:19:48:0,48,500	0/0:21,0:20:45.28:0,45,388	0/0:28,0:27:25.86:0,26,408	0/0:24,0:24:71.92:0,72,624	0/0:26,0:24:31.66:0,32,438	0/0:26,0:25:50.46:0,50,870	0/0:21,0:16:30.05:0,30,552	1/1:0,16:16:2.87:18,3,0	1/1:4,20:24:12.56:217,13,0	0/0:20,0:20:34.69:0,35,482	0/0:33,0:33:74.85:0,75,658	0/0:34,0:34:59.37:0,59,542	0/0:30,0:28:64.09:0,64,549	0/1:12,0:11:1.65:2,0,263	0/0:13,0:12:29.98:0,30,361	0/0:20,0:20:28.07:0,28,342	0/0:10,0:8:17.99:0,18,257	0/1:18,0:17:77.83:134,0,78	0/1:25,0:25:64.53:318,0,65	1/1:13,1:14:0.09:168,0,0	0/0:24,0:23:66.08:0,66,1094	0/0:22,0:22:63.03:0,63,621	0/0:24,0:24:72.09:0,72,1367	0/0:9,0:8:14.96:0,15,120
chr10	48179729	.	AT	A	1393.90	PASS	AB=0.867;AC=15;AF=0.268;AN=56;BaseQRankSum=6.545;DP=724;FS=7.231;HRun=14;HaplotypeScore=102.2934;InbreedingCoeff=0.4026;MQ=71.33;MQ0=1;MQRankSum=-0.014;QD=5.24;ReadPosRankSum=4.168;VQSLOD=2.4582;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,3:39:40.28:0,40,601	0/0:5,0:7:14.68:0,15,109	0/1:20,1:20:30.13:30,0,132	0/1:17,0:16:11.66:12,0,37	0/0:25,0:25:48.04:0,48,442	0/1:20,3:23:10.74:11,0,317	0/0:28,2:32:21.86:0,22,474	0/1:25,4:32:7.14:7,0,470	0/0:27,0:27:54.81:0,55,457	0/0:16,1:19:30.23:0,30,393	0/0:17,2:19:4.59:0,5,293	0/1:14,15:32:1.04:177,0,1	1/1:12,12:25:6.94:184,7,0	0/0:18,1:19:18.36:0,18,288	0/0:29,0:29:42.02:0,42,380	0/0:11,0:44:39.87:0,40,203	0/0:34,0:34:84.04:0,84,758	0/0:21,0:21:41.99:0,42,372	0/0:6,0:17:37.73:0,38,231	0/0:5,0:23:54.80:0,55,305	0/0:12,0:37:60.23:0,60,343	1/1:4,19:24:27.67:327,28,0	1/1:3,13:17:37.68:252,38,0	1/1:6,28:36:78.42:526,78,0	0/1:24,3:28:7.90:8,0,334	0/0:36,2:39:27.61:0,28,504	0/0:10,0:25:34.90:0,35,224	0/1:7,3:11:34.89:35,0,123
chr10	48180440	.	T	TCCT	14433.86	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=7.448;DP=713;FS=29.889;HRun=0;HaplotypeScore=180.5384;InbreedingCoeff=0.9988;MQ=58.13;MQ0=10;MQRankSum=-5.800;QD=41.24;ReadPosRankSum=0.859;VQSLOD=3.9252;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:95.11:0,95,1820	0/0:10,0:10:27.09:0,27,434	0/0:43,0:24:35.35:0,35,758	0/0:62,0:37:82.47:0,82,1122	1/1:22,4:27:72.05:1235,72,0	0/0:18,0:18:47.34:0,47,716	0/0:26,0:26:75.20:0,75,1151	1/1:32,0:33:46.11:904,46,0	0/0:26,0:26:66.20:0,66,1012	1/1:27,0:27:68.67:1315,69,0	1/1:29,0:28:71.82:1147,72,0	0/0:23,0:23:55.90:0,56,343	0/0:19,0:19:46.91:0,47,289	1/1:21,0:21:54.13:1015,54,0	0/0:28,0:28:84.23:0,84,1254	1/1:22,0:22:59.91:1095,60,0	1/1:21,0:21:54.36:785,54,0	1/1:19,0:19:43.40:704,43,0	1/1:19,0:19:33.82:446,34,0	1/1:26,0:26:66.11:1140,66,0	1/1:18,0:18:47.96:818,48,0	0/0:15,0:15:37.70:0,38,234	0/0:14,0:14:32.32:0,32,197	0/0:31,0:31:58.82:0,59,363	1/1:30,0:30:51.45:1227,51,0	1/1:22,0:22:55.07:1067,55,0	1/1:24,0:24:66.02:1177,66,0	1/1:12,0:12:18.53:359,19,0
chr10	48180442	.	CTCT	C	4302.53	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=-2.588;DP=716;FS=5.586;HRun=0;HaplotypeScore=214.7934;InbreedingCoeff=0.4191;MQ=58.08;MQ0=10;MQRankSum=1.774;QD=17.28;ReadPosRankSum=-2.441;VQSLOD=3.7462;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,117,2674	0/0:11,0:11:16.12:0,16,658	0/0:43,0:24:65.98:0,66,1255	0/0:65,0:39:89.99:0,90,1565	0/0:27,0:27:18.23:0,18,380	0/0:18,0:18:53.21:0,53,1043	0/0:27,0:27:81.21:0,81,1676	0/1:34,0:34:56.32:56,0,402	0/0:25,0:25:72.23:0,72,1500	0/0:27,0:27:12.95:0,13,374	0/0:28,0:27:19.85:0,20,407	1/1:0,24:24:57.20:968,57,0	1/1:0,19:19:48.04:816,48,0	0/0:21,0:21:6.71:0,7,262	0/0:29,0:29:87.25:0,87,1770	0/0:22,0:22:26.37:0,26,284	0/1:22,0:22:15.38:15,0,262	0/1:19,0:19:19.86:20,0,176	0/1:19,0:19:72.22:72,0,119	0/0:25,0:25:60.51:0,61,436	0/1:20,0:20:2.04:2,0,229	1/1:0,15:15:45.08:716,45,0	1/1:0,14:14:33.11:558,33,0	1/1:1,28:29:59.99:1016,60,0	0/0:29,0:29:20.72:0,21,394	0/1:22,0:22:16.70:17,0,275	0/0:25,0:25:59.03:0,59,387	0/1:12,0:12:47.15:47,0,93
chr10	48180443	.	T	TC	3929.95	PASS	AB=0.646;AC=19;AF=0.339;AN=56;BaseQRankSum=9.744;DP=713;FS=6.770;HRun=2;HaplotypeScore=193.7221;InbreedingCoeff=0.1006;MQ=59.60;MQ0=9;MQRankSum=-6.875;QD=11.16;ReadPosRankSum=8.081;VQSLOD=1.7074;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,115,1618	0/0:11,0:11:30.07:0,30,389	0/0:42,0:26:63.55:0,64,774	0/0:60,1:37:70.29:0,70,1070	0/1:9,18:27:18.12:336,0,18	0/0:19,0:19:52.41:0,52,665	0/0:27,0:27:81.19:0,81,1004	0/1:23,12:35:99:154,0,129	0/0:25,0:25:72.23:0,72,922	1/1:10,18:28:15.20:404,15,0	0/1:12,16:27:67.71:265,0,68	0/0:24,0:24:34.48:0,34,93	0/0:19,0:19:28.94:0,29,79	1/1:7,14:21:21.99:348,22,0	0/0:29,0:29:87.26:0,87,1101	1/1:6,16:22:3.71:329,4,0	0/1:10,12:22:63.48:191,0,63	0/1:10,9:19:50.52:174,0,51	0/1:12,7:19:80.84:118,0,81	0/1:8,17:25:10.37:326,0,10	0/1:6,14:20:58.53:217,0,59	0/0:15,0:15:28.95:0,29,98	0/0:14,0:14:20.39:0,20,56	0/0:29,0:29:35.55:0,36,95	0/1:12,18:30:48.07:294,0,48	1/1:3,15:21:22.85:352,23,0	0/1:8,17:25:28.91:338,0,29	0/1:5,5:10:16.75:85,0,17
chr10	48180445	.	T	TCC	8026.03	PASS	AB=0.677;AC=23;AF=0.411;AN=56;BaseQRankSum=8.433;DP=712;FS=12.483;HRun=1;HaplotypeScore=196.8450;InbreedingCoeff=0.5078;MQ=59.54;MQ0=8;MQRankSum=-4.003;QD=22.80;ReadPosRankSum=4.096;VQSLOD=2.0229;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,114,2009	0/0:12,0:12:16.12:0,16,472	0/0:43,0:27:62.50:0,63,939	0/0:59,0:35:90.13:0,90,1306	1/1:9,18:27:19.95:651,20,0	0/0:19,0:19:56.54:0,57,857	0/0:27,0:27:81.17:0,81,1228	0/1:22,12:34:60.65:456,0,61	0/0:24,0:24:72.23:0,72,1134	1/1:9,18:27:29.66:736,30,0	0/1:12,16:27:6.24:565,0,6	0/0:24,0:24:50.65:0,51,210	0/0:20,0:20:42.69:0,43,178	1/1:7,14:21:51.61:671,52,0	0/0:29,0:29:84.25:0,84,1294	1/1:6,16:22:53.71:691,54,0	0/1:11,12:23:10.87:359,0,11	0/1:9,9:18:18.13:344,0,18	0/1:14,7:21:39.68:235,0,40	1/1:8,17:25:39.42:632,39,0	1/1:6,14:20:18.33:490,18,0	0/0:15,0:15:39.66:0,40,171	0/0:14,0:14:29.40:0,29,123	0/0:28,0:28:53.02:0,53,216	0/1:12,18:30:12.34:605,0,12	1/1:6,15:21:34.81:676,35,0	1/1:8,17:25:50.25:720,50,0	0/1:5,5:10:18.91:196,0,19
chr10	48182375	.	GGT	G	661.31	PASS	AB=0.890;AC=13;AF=0.241;AN=54;BaseQRankSum=8.519;DP=678;FS=1.180;HRun=0;HaplotypeScore=145.0517;InbreedingCoeff=0.5295;MQ=59.78;MQ0=12;MQRankSum=-4.553;QD=4.03;ReadPosRankSum=4.010;VQSLOD=2.6016;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,2:49:40.73:0,41,976	0/1:5,1:6:22.15:22,0,117	0/0:40,0:22:8.95:0,9,81	0/0:36,0:14:3.48:0,3,34	0/0:19,0:17:5.99:0,6,50	0/0:23,0:23:31.34:0,31,450	0/1:29,4:33:51.44:51,0,551	0/0:35,0:31:33.59:0,34,300	0/1:20,1:23:7.45:7,0,417	0/0:25,0:25:44.85:0,45,424	0/0:9,0:9:5.67:0,6,58	1/1:27,0:27:48.29:239,48,0	1/1:27,0:27:57.14:299,57,0	0/0:32,0:30:12.01:0,12,109	0/0:19,3:22:1.93:0,2,470	0/0:22,0:27:9.01:0,9,94	0/0:27,0:28:15.47:0,15,158	0/0:11,0:11:9.82:0,10,68	0/0:22,0:21:35.92:0,36,377	0/0:12,0:10:3.01:0,3,45	0/0:51,0:51:13.70:0,14,102	1/1:15,0:15:22.26:107,22,0	1/1:10,0:10:8.52:42,9,0	1/1:23,0:23:13.44:64,13,0	0/0:16,0:16:8.98:0,9,74	0/0:21,0:22:41.52:0,42,398	0/0:19,0:24:20.88:0,21,177	./.
chr10	48182377	.	TGTGTG	T	1972.68	PASS	AB=0.729;AC=8;AF=0.143;AN=56;BaseQRankSum=10.324;DP=685;FS=5.792;HRun=0;HaplotypeScore=171.4193;InbreedingCoeff=0.5230;MQ=57.99;MQ0=12;MQRankSum=-8.680;QD=19.53;ReadPosRankSum=6.893;VQSLOD=2.5960;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,129,3246	0/0:6,0:6:18.06:0,18,404	0/0:38,0:20:55.99:0,56,766	0/0:38,0:16:37.60:0,38,551	0/0:19,0:17:22.73:0,23,292	0/0:23,0:23:69.23:0,69,1730	0/0:35,0:35:99:0,99,2281	0/0:32,0:28:79.12:0,79,1431	0/0:23,0:23:61.05:0,61,1449	0/0:23,0:23:67.39:0,67,1414	0/0:9,0:9:11.44:0,11,185	1/1:9,17:26:3.38:700,3,0	1/1:9,17:27:1.63:792,2,0	0/0:31,0:29:43.23:0,43,595	0/0:26,0:26:69.70:0,70,1660	0/0:29,0:29:38.08:0,38,703	0/0:27,0:27:51.80:0,52,671	0/0:12,0:11:26.67:0,27,423	0/0:22,0:21:63.21:0,63,1406	0/0:12,0:10:15.05:0,15,252	0/0:53,0:53:66.40:0,66,1183	0/1:6,8:15:12.61:321,0,13	0/1:8,2:10:39:96,0,39	1/1:14,9:23:6.17:190,6,0	0/0:17,0:16:14.59:0,15,296	0/0:28,0:28:70.44:0,70,1558	0/0:24,0:24:48.60:0,49,939	0/0:8,0:8:19.83:0,20,98
chr10	48182405	.	T	TGA	1760.03	PASS	AB=1.000;AC=20;AF=0.357;AN=56;BaseQRankSum=6.192;DP=657;FS=0.000;HRun=0;HaplotypeScore=186.2896;InbreedingCoeff=0.7388;MQ=59.08;MQ0=7;MQRankSum=-4.806;QD=8.46;ReadPosRankSum=-1.162;VQSLOD=3.2218;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,126,1330	0/0:6,0:6:14.99:0,15,142	0/0:30,0:17:46.57:0,47,487	0/0:32,0:15:33.01:0,33,357	1/1:13,0:11:1.24:3,1,0	0/0:19,0:19:54.04:0,54,639	0/0:32,0:32:87.03:0,87,921	0/0:28,0:25:10.96:0,11,303	0/0:26,0:26:55.58:0,56,743	1/1:24,0:24:48.51:335,49,0	1/1:9,0:9:15.02:170,15,0	0/0:28,0:28:71.70:0,72,570	0/0:29,0:29:83.17:0,83,633	1/1:25,0:23:19.24:169,19,0	0/0:34,0:34:89.81:0,90,935	0/1:27,0:27:7.60:8,0,114	1/1:24,0:25:32.35:239,32,0	1/1:13,1:14:31.18:227,31,0	0/0:20,0:20:3.09:0,3,240	0/0:10,0:8:5.96:0,6,43	0/0:47,0:46:2.34:0,2,223	0/0:20,0:19:39.32:0,39,309	0/0:6,0:6:17.82:0,18,137	0/0:27,0:27:30.78:0,31,241	1/1:17,1:17:20.77:236,21,0	1/1:12,16:29:64.11:471,64,0	0/1:21,0:21:15.76:16,0,46	1/1:3,0:3:8.98:86,9,0
chr10	48182667	.	GAGC	G	4314.88	PASS	AB=0.685;AC=23;AF=0.426;AN=54;BaseQRankSum=4.512;DP=608;FS=19.338;HRun=0;HaplotypeScore=125.7158;InbreedingCoeff=0.2775;MQ=72.91;MQ0=3;MQRankSum=-6.575;QD=14.98;ReadPosRankSum=1.133;VQSLOD=3.4151;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:81.26:0,81,1685	0/0:6,0:6:12.04:0,12,257	0/0:29,0:29:45.81:0,46,939	0/0:40,0:40:70.62:0,71,1594	1/1:3,5:8:12.04:181,12,0	0/0:19,0:19:45.15:0,45,966	0/0:30,0:30:75.26:0,75,1611	0/1:3,0:13:42.66:55,0,43	0/0:21,0:21:57.20:0,57,1205	1/1:5,22:24:57.17:857,57,0	0/1:3,4:7:37.32:37,0,101	0/0:47,2:47:87.67:0,88,2012	0/1:27,0:26:62.46:62,0,1049	0/1:14,15:26:99:408,0,152	0/0:16,0:16:36.11:0,36,733	1/1:3,10:13:18.06:278,18,0	0/1:9,18:30:66.96:665,0,67	0/1:7,25:26:44.89:602,0,45	1/1:3,4:6:12:159,12,0	1/1:3,1:4:6.02:93,6,0	1/1:10,15:21:13.44:130,13,0	0/1:13,0:13:28.27:28,0,304	0/0:14,0:14:24.07:0,24,465	0/0:43,3:50:30.88:0,31,1726	0/1:6,16:22:99:257,0,198	0/1:5,8:12:88:318,0,88	1/1:1,4:5:12.04:185,12,0	./.
chr10	48182675	.	GCA	G	597.57	PASS	AB=0.961;AC=19;AF=0.352;AN=54;BaseQRankSum=7.504;DP=626;FS=15.054;HRun=0;HaplotypeScore=133.6953;InbreedingCoeff=0.2727;MQ=65.84;MQ0=19;MQRankSum=-4.861;QD=2.29;ReadPosRankSum=1.680;VQSLOD=1.9545;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:90.29:0,90,1733	0/0:7,0:7:15.05:0,15,281	0/0:30,0:22:8.45:0,8,916	0/0:40,0:36:63.49:0,63,1421	1/1:8,0:7:10.41:45,10,0	0/0:16,0:16:45.15:0,45,911	0/0:26,0:26:78.27:0,78,1561	0/0:15,0:11:28.26:0,28,287	0/0:19,0:19:57.20:0,57,1154	1/1:24,2:21:47.90:188,48,0	0/1:6,1:7:0.69:1,0,113	0/0:55,2:50:99:0,115,2122	0/0:28,4:29:21.24:0,21,1084	0/1:36,0:28:76.51:77,0,322	0/0:14,0:14:42.13:0,42,790	1/1:10,0:10:14.97:56,15,0	0/1:45,0:34:99:124,0,115	0/1:38,2:31:76.14:76,0,183	0/1:8,0:6:23.61:34,0,24	1/1:2,0:2:4.99:18,5,0	0/1:23,1:15:6.11:22,0,6	0/1:14,1:15:7.83:8,0,285	0/0:12,0:12:23.74:0,24,472	0/0:62,2:52:77.23:0,77,1763	0/1:23,0:21:25.58:26,0,239	0/1:11,1:10:61.56:62,0,95	1/1:5,0:5:10.18:39,10,0	./.
chr10	48182685	.	A	AGG	278.26	PASS	AB=0.700;AC=5;AF=0.093;AN=54;BaseQRankSum=3.194;DP=679;FS=6.582;HRun=3;HaplotypeScore=150.3802;InbreedingCoeff=0.5696;MQ=54.64;MQ0=43;MQRankSum=-4.691;QD=5.15;ReadPosRankSum=-1.694;VQSLOD=-0.6731;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:66.20:0,66,897	0/0:4,0:4:12.04:0,12,168	0/0:26,0:16:36.11:0,36,480	0/0:32,0:25:31.62:0,32,683	0/0:7,0:6:3.01:0,3,42	0/0:12,0:12:33.10:0,33,445	0/0:29,0:29:81.19:0,81,1075	0/0:20,0:13:33.06:0,33,423	0/0:20,0:20:57.18:0,57,779	0/0:24,0:18:30.08:0,30,405	0/0:8,0:7:9.02:0,9,110	0/0:69,0:57:88.11:0,88,1406	0/0:42,0:38:53.84:0,54,943	0/0:37,0:27:21.26:0,21,460	0/0:12,0:12:33.11:0,33,461	0/0:9,0:9:18.06:0,18,251	0/0:52,0:41:53.97:0,54,906	0/0:52,0:41:78.19:0,78,1029	0/1:4,3:4:10.40:111,0,10	./.	1/1:32,11:23:4.25:61,4,0	0/0:15,0:13:12.02:0,12,168	0/0:14,0:12:16.96:0,17,197	0/0:71,3:60:28.08:0,28,1130	0/0:19,1:18:26.91:0,27,360	0/0:15,0:10:30.09:0,30,390	1/1:0,4:4:12.04:219,12,0	0/0:4,0:2:3:0,3,25
chr10	48183080	.	A	AGTGT	1513.93	PASS	AB=0.739;AC=31;AF=0.646;AN=48;BaseQRankSum=-2.256;DP=681;FS=0.000;HRun=0;HaplotypeScore=126.1941;InbreedingCoeff=0.0902;MQ=70.59;MQ0=22;MQRankSum=0.310;QD=3.27;ReadPosRankSum=-2.164;VQSLOD=1.9588;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:33,9:44:36.21:201,0,36	./.	./.	./.	1/1:12,0:11:5.49:24,5,0	1/1:14,3:18:0.61:66,1,0	0/1:23,0:28:13.21:46,0,13	1/1:30,0:30:2.29:6,2,0	0/1:8,7:17:34.61:141,0,35	1/1:18,1:23:14.10:130,14,0	1/1:12,0:15:2.74:12,3,0	0/0:14,0:21:6.11:0,6,75	0/0:17,0:28:14.98:0,15,132	1/1:20,0:26:8.47:104,8,0	0/1:12,10:22:10.11:199,0,10	0/1:14,6:21:11.96:92,0,12	0/1:13,1:26:34.70:88,0,35	0/1:20,0:24:22.40:22,0,165	1/1:19,0:19:12.91:160,13,0	./.	1/1:26,0:43:2.74:13,3,0	0/0:13,0:15:5.84:0,6,56	0/0:15,0:14:0.47:0,0,1	0/0:22,0:32:26.82:0,27,251	1/1:6,0:10:8.23:37,8,0	1/1:37,0:37:0.65:137,1,0	1/1:19,5:28:8.77:153,9,0	1/1:10,0:10:5.35:29,5,0
chr10	48183339	.	T	TA	1171.23	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-8.152;DP=563;FS=0.000;HRun=3;HaplotypeScore=64.3644;InbreedingCoeff=0.9895;MQ=63.17;MQ0=1;MQRankSum=-0.346;QD=35.49;ReadPosRankSum=-4.806;VQSLOD=1.9126;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:36:96.29:0,96,1151	0/0:11,0:11:33.10:0,33,396	0/0:23,0:21:57.14:0,57,661	0/0:22,0:20:52.97:0,53,588	0/0:17,0:17:42.09:0,42,479	0/0:18,0:18:54.17:0,54,648	0/0:18,0:18:54.17:0,54,648	1/1:2,31:33:93.29:1266,93,0	0/0:10,0:10:27.08:0,27,324	0/0:19,0:19:57.17:0,57,676	0/0:7,0:7:21.06:0,21,252	0/0:25,0:25:66.19:0,66,780	0/0:12,0:12:27.08:0,27,324	0/0:16,0:16:42.13:0,42,504	0/0:20,0:20:57.16:0,57,672	0/0:17,0:17:48.15:0,48,576	0/0:33,0:33:99:0,99,1174	0/0:28,0:28:84.20:0,84,979	0/0:21,0:21:54.15:0,54,637	0/0:17,0:17:42.13:0,42,504	0/0:38,0:38:99:0,108,1285	0/0:19,0:19:57.16:0,57,672	0/0:14,0:14:39.12:0,39,468	0/0:18,0:18:51.16:0,51,612	0/0:11,0:11:24.07:0,24,286	0/0:15,0:15:42.13:0,42,504	0/0:36,0:35:99:0,105,1258	0/0:8,0:8:24.07:0,24,288
chr10	48183440	.	G	GCCA	4062.07	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=12.655;DP=544;FS=1.024;HRun=0;HaplotypeScore=97.2602;InbreedingCoeff=0.9962;MQ=65.66;MQ0=0;MQRankSum=-11.918;QD=49.54;ReadPosRankSum=0.772;VQSLOD=5.7929;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:63.20:0,63,1125	0/0:12,0:12:33.11:0,33,614	0/0:15,0:11:33.09:0,33,579	0/0:18,0:17:41.57:0,42,730	0/0:12,0:12:21.07:0,21,389	0/0:22,0:22:66.21:0,66,1198	0/0:24,0:24:72.25:0,72,1311	0/0:18,0:18:51.16:0,51,888	0/0:17,0:17:48.16:0,48,895	0/0:25,0:25:60.21:0,60,1103	0/0:13,0:13:33.11:0,33,612	1/1:2,19:21:61.09:1345,61,0	1/1:0,14:15:39.13:867,39,0	0/0:19,0:19:57.20:0,57,1044	0/0:21,0:21:63.22:0,63,1166	0/0:18,0:18:48.16:0,48,888	0/0:27,0:27:81.28:0,81,1476	0/0:24,0:24:72.25:0,72,1342	0/0:25,0:25:75.21:0,75,1327	0/0:10,0:10:24.08:0,24,444	0/0:38,0:37:97.54:0,98,1919	1/1:1,14:15:36.12:699,36,0	1/1:1,9:12:17.75:343,18,0	1/1:0,17:19:36.12:808,36,0	0/0:14,0:14:36.12:0,36,643	0/0:28,0:28:78.27:0,78,1446	0/0:26,0:26:78.27:0,78,1454	0/0:12,0:12:36.10:0,36,630
chr10	48184929	.	AC	A	4573.55	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=10.134;DP=586;FS=11.558;HRun=7;HaplotypeScore=62.3043;InbreedingCoeff=0.9887;MQ=78.49;MQ0=0;MQRankSum=-3.326;QD=27.22;ReadPosRankSum=3.159;VQSLOD=5.0246;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,108,1422	0/0:6,0:6:15.05:0,15,204	0/0:16,0:16:42.10:0,42,518	0/0:18,0:18:45.03:0,45,523	1/1:2,15:17:38.85:417,39,0	0/0:20,0:20:54.13:0,54,673	0/0:33,0:33:96.29:0,96,1273	0/0:19,0:19:39.06:0,39,481	0/0:22,0:22:63.20:0,63,842	1/1:3,17:20:48.13:535,48,0	1/1:1,14:15:33.09:374,33,0	0/0:25,0:25:72.24:0,72,974	0/0:19,0:19:54.16:0,54,714	1/1:3,22:25:10.09:497,10,0	0/0:16,0:16:42.14:0,42,574	0/0:19,0:19:57.19:0,57,777	1/1:0,33:33:90.26:1021,90,0	1/1:0,23:23:60.17:681,60,0	0/0:19,0:19:45.14:0,45,595	0/0:15,0:15:42.07:0,42,544	0/0:58,0:58:99:0,144,1880	0/0:15,0:15:30.09:0,30,394	0/0:13,0:13:36.10:0,36,472	0/0:27,0:27:72.23:0,72,965	1/1:0,12:12:36.10:408,36,0	1/1:2,13:15:39.11:436,39,0	0/0:19,0:19:57.19:0,57,774	1/1:1,7:8:18.05:204,18,0
chr10	48188809	.	GAGA	G	3676.09	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=10.752;DP=552;FS=0.000;HRun=0;HaplotypeScore=81.1911;InbreedingCoeff=0.9991;MQ=87.57;MQ0=0;MQRankSum=-2.657;QD=42.25;ReadPosRankSum=2.600;VQSLOD=4.7389;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:34:99:0,102,2302	0/0:14,0:14:42.14:0,42,961	0/0:21,0:21:60.18:0,60,1262	0/0:22,0:22:66.16:0,66,1374	0/0:27,0:27:78.27:0,78,1772	0/0:22,0:22:63.22:0,63,1445	0/0:16,0:16:48.12:0,48,1016	0/0:30,0:30:75.25:0,75,1673	0/0:14,0:14:42.14:0,42,952	0/0:22,0:22:62.96:0,63,1448	0/0:15,0:15:45.15:0,45,1037	1/1:1,14:16:42.14:714,42,0	1/1:2,16:18:51.17:866,51,0	0/0:13,0:13:39.13:0,39,895	0/0:23,0:23:69.24:0,69,1561	0/0:29,0:29:87.30:0,87,1953	0/0:24,0:24:72.22:0,72,1613	0/0:28,0:28:84.29:0,84,1917	0/0:12,0:12:36.11:0,36,788	0/0:9,0:9:27.09:0,27,623	0/0:31,0:31:93.32:0,93,2107	1/1:2,13:15:39.13:664,39,0	1/1:0,15:15:33.11:562,33,0	1/1:0,23:23:51.17:869,51,0	0/0:12,0:12:36.12:0,36,800	0/0:17,0:17:48.16:0,48,1106	0/0:21,0:21:60.21:0,60,1351	0/0:8,0:8:24.08:0,24,553
chr10	48188906	.	AT	A	10314.76	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=9.416;DP=510;FS=0.798;HRun=7;HaplotypeScore=49.5246;InbreedingCoeff=0.9889;MQ=79.91;MQ0=0;MQRankSum=-3.446;QD=27.29;ReadPosRankSum=1.398;VQSLOD=5.4071;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:81.24:0,81,1004	0/0:11,0:11:30.10:0,30,377	0/0:19,0:19:54.07:0,54,627	0/0:5,0:5:13.28:0,13,152	1/1:0,30:30:90.21:918,90,0	0/0:26,0:25:78.25:0,78,981	0/0:10,0:10:27.09:0,27,339	1/1:5,31:36:90.20:918,90,0	0/0:14,0:14:36.12:0,36,453	1/1:2,29:31:87.20:888,87,0	1/1:2,18:20:54.12:551,54,0	1/1:1,15:16:45.10:459,45,0	1/1:1,12:13:33.07:337,33,0	1/1:2,13:15:36.08:367,36,0	0/0:16,0:16:45.14:0,45,556	1/1:1,10:11:30.07:306,30,0	1/1:0,21:21:60.14:612,60,0	1/1:0,19:19:54.12:551,54,0	1/1:3,9:12:27.06:276,27,0	1/1:2,15:17:45.10:459,45,0	1/1:4,7:11:12.02:122,12,0	1/1:2,17:19:48.11:490,48,0	1/1:0,25:25:72.16:735,72,0	1/1:2,10:12:30.07:306,30,0	1/1:2,21:23:60.14:612,60,0	1/1:0,17:17:51.12:520,51,0	1/1:1,23:24:69.16:703,69,0	1/1:0,6:6:18.04:184,18,0
chr10	48189535	.	TGACTTCAA	T	12282.78	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=17.352;DP=645;FS=2.938;HRun=0;HaplotypeScore=170.9848;InbreedingCoeff=0.9175;MQ=70.24;MQ0=0;MQRankSum=-16.205;QD=59.92;ReadPosRankSum=0.866;VQSLOD=4.4041;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,117,5077	0/0:14,0:14:39.13:0,39,1700	0/0:9,0:9:13.88:0,14,511	0/1:15,0:15:15.43:15,0,518	1/1:1,18:19:48.13:1247,48,0	0/0:27,0:27:78.27:0,78,3429	0/0:16,0:16:45.15:0,45,1899	0/0:36,0:36:99:0,108,4441	0/0:19,0:19:57.17:0,57,2420	1/1:4,27:31:78.27:2204,78,0	1/1:0,16:16:45.15:1264,45,0	0/0:29,0:29:81.26:0,81,3388	0/0:22,0:22:63.22:0,63,2703	1/1:5,22:27:54.19:1537,54,0	0/0:32,0:32:93.32:0,93,4033	0/0:19,0:19:54.19:0,54,2315	1/1:4,22:26:51.13:1302,51,0	1/1:3,9:12:21.07:482,21,0	0/0:19,0:19:54.19:0,54,2331	0/0:15,0:15:45.15:0,45,1837	0/0:34,0:34:99:0,99,4065	0/0:15,0:15:42.13:0,42,1740	0/0:28,0:28:84.29:0,84,3507	0/0:34,0:34:96.33:0,96,4159	1/1:0,25:25:72.25:2065,72,0	1/1:3,20:23:60.21:1649,60,0	0/0:31,0:31:87.30:0,87,3755	1/1:2,9:11:18.06:516,18,0
chr10	48190311	.	CTTTGTTTTGT	C	10862.79	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=14.496;DP=770;FS=6.537;HRun=0;HaplotypeScore=227.1876;InbreedingCoeff=0.9784;MQ=60.96;MQ0=4;MQRankSum=-12.479;QD=49.38;ReadPosRankSum=1.032;VQSLOD=3.6824;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:54.18:0,54,2453	0/0:16,0:16:42.14:0,42,1853	0/0:35,0:25:39.09:0,39,1687	0/0:34,0:20:20.27:0,20,713	1/1:9,22:32:51.09:1340,51,0	0/0:26,0:26:60.19:0,60,2843	0/0:28,0:28:66.23:0,66,3155	0/0:33,0:33:69.23:0,69,2649	0/0:20,0:20:54.19:0,54,2647	1/1:7,27:34:81.28:2303,81,0	1/1:10,9:19:21.03:481,21,0	0/0:23,0:23:54.15:0,54,2373	0/0:28,0:28:57.20:0,57,2791	1/1:7,19:26:42.62:1289,43,0	0/0:29,0:29:66.21:0,66,2847	0/0:11,0:33:50.94:0,51,586	1/1:8,19:26:33.11:1013,33,0	1/1:5,15:20:21.07:644,21,0	0/0:21,0:20:33.08:0,33,1398	0/0:27,0:27:72.25:0,72,3377	0/0:27,0:27:57.20:0,57,2734	0/0:45,0:45:99:0,108,4757	0/0:31,0:31:72.25:0,72,3310	0/0:38,0:38:81.28:0,81,3580	1/1:3,15:18:36.12:1105,36,0	1/1:7,23:31:72.24:1973,72,0	0/0:30,0:30:66.23:0,66,3121	1/1:3,10:13:5.10:715,5,0
chr10	48194884	.	G	GGAAT	29877.39	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-11.699;DP=758;FS=1.389;HRun=0;HaplotypeScore=121.1357;InbreedingCoeff=0.9993;MQ=66.92;MQ0=3;MQRankSum=-5.502;QD=56.37;ReadPosRankSum=1.653;VQSLOD=6.3388;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,123,2253	0/0:11,0:11:30.10:0,30,552	0/0:26,0:25:54.16:0,54,948	0/0:21,0:21:51.17:0,51,927	1/1:9,18:27:51.06:1117,51,0	0/0:29,0:29:72.24:0,72,1295	0/0:34,0:34:87.28:0,87,1570	1/1:13,25:40:93.29:2311,93,0	0/0:17,0:17:51.17:0,51,933	1/1:8,27:36:84.28:2121,84,0	1/1:8,18:26:51.08:1063,51,0	1/1:4,29:35:81.28:2127,81,0	1/1:5,30:37:96.33:2530,96,0	1/1:7,27:39:93.32:2395,93,0	0/0:46,0:46:99:0,126,2290	1/1:2,19:23:57.20:1495,57,0	1/1:5,36:39:84.29:2218,84,0	1/1:1,11:13:33.07:812,33,0	1/1:9,12:21:42.13:1023,42,0	1/1:3,11:16:30.10:789,30,0	1/1:6,26:32:69.11:1601,69,0	1/1:2,23:26:66:1479,66,0	1/1:2,19:21:42.10:1049,42,0	1/1:4,22:29:66.09:1673,66,0	1/1:3,8:11:24.08:634,24,0	1/1:5,15:21:51.16:1284,51,0	1/1:1,19:20:57.15:1444,57,0	1/1:2,10:13:27.09:713,27,0
chr10	48195198	.	GAAA	G	4506.75	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=4.519;DP=556;FS=17.909;HRun=14;HaplotypeScore=104.8974;InbreedingCoeff=0.9921;MQ=69.57;MQ0=1;MQRankSum=-3.197;QD=22.65;ReadPosRankSum=6.569;VQSLOD=1.9610;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:31:81.70:0,82,1351	0/0:8,0:9:24.07:0,24,392	0/0:31,0:21:39.35:0,39,530	0/0:22,0:17:34.31:0,34,347	1/1:1,28:29:62.44:639,62,0	0/0:22,0:23:64.40:0,64,990	0/0:15,0:16:42.08:0,42,680	0/0:32,0:35:82.03:0,82,1238	0/0:18,0:18:48.09:0,48,763	1/1:6,11:17:36.05:420,36,0	1/1:3,17:20:44.86:473,45,0	0/0:14,0:14:39.12:0,39,676	0/0:14,0:17:45.10:0,45,752	1/1:5,14:21:31.60:383,32,0	0/0:14,0:14:30.07:0,30,479	1/1:3,12:15:33.03:386,33,0	1/1:5,35:40:69.23:837,69,0	1/1:2,14:17:45.02:502,45,0	0/0:18,0:20:54.11:0,54,798	0/0:14,0:15:31.77:0,32,446	0/0:11,0:12:28.21:0,28,437	0/0:13,0:13:30.06:0,30,487	0/0:20,0:21:46.67:0,47,716	0/0:17,0:18:48.10:0,48,726	1/1:2,7:9:15.01:175,15,0	1/1:4,18:25:46.63:571,47,0	0/0:20,0:28:63.05:0,63,979	1/1:2,3:6:11.94:122,12,0
chr10	48195744	.	G	GT	10764.32	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-12.842;DP=492;FS=11.919;HRun=7;HaplotypeScore=40.9264;InbreedingCoeff=0.9885;MQ=76.28;MQ0=0;MQRankSum=-3.837;QD=29.82;ReadPosRankSum=0.160;VQSLOD=4.2253;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:48.07:0,48,464	0/0:7,0:7:18.03:0,18,174	0/0:16,0:16:39.04:0,39,363	0/0:9,0:9:20.82:0,21,202	1/1:7,21:28:60.18:725,60,0	0/0:25,0:25:69.04:0,69,651	0/0:23,0:23:66.11:0,66,637	1/1:9,35:44:99:1302,108,0	0/0:13,0:13:36.06:0,36,348	1/1:3,12:15:36.11:434,36,0	1/1:0,18:18:54.12:636,54,0	1/1:3,13:16:33.10:399,33,0	1/1:1,13:14:36.11:435,36,0	1/1:2,9:11:24.07:290,24,0	0/0:21,0:21:60.10:0,60,579	1/1:2,14:16:42.13:507,42,0	1/1:3,21:24:16.01:675,16,0	1/1:0,14:14:33.10:398,33,0	1/1:5,14:19:42.13:507,42,0	1/1:0,24:24:69.21:833,69,0	1/1:0,6:6:18.06:217,18,0	1/1:1,5:6:15.05:181,15,0	1/1:1,12:13:33.10:399,33,0	1/1:0,11:11:30.09:362,30,0	1/1:2,19:21:51.16:616,51,0	1/1:1,24:25:72.22:870,72,0	1/1:2,23:24:66.20:797,66,0	1/1:5,6:11:15.05:181,15,0
chr10	48195868	.	TACAC	T	1219.74	PASS	AB=0.859;AC=18;AF=0.360;AN=50;BaseQRankSum=3.489;DP=520;FS=0.775;HRun=0;HaplotypeScore=91.5601;InbreedingCoeff=0.7012;MQ=58.78;MQ0=10;MQRankSum=0.583;QD=7.05;ReadPosRankSum=1.218;VQSLOD=2.2866;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:24:33.30:0,33,654	./.	./.	./.	1/1:10,6:16:14.91:178,15,0	0/0:16,0:15:20.02:0,20,330	0/0:16,0:16:18.03:0,18,283	0/0:26,0:26:9.03:0,9,136	0/0:13,0:13:6.02:0,6,85	1/1:18,2:20:4.32:91,4,0	1/1:8,12:20:21.03:301,21,0	0/0:12,0:12:24.08:0,24,567	0/0:11,0:11:15.05:0,15,321	1/1:9,1:11:6.01:75,6,0	0/0:17,0:17:12.04:0,12,245	0/0:9,0:22:38.87:0,39,673	0/1:15,6:22:13.55:217,0,14	1/1:13,2:15:11.94:138,12,0	0/0:19,0:19:27.56:0,28,508	0/0:21,0:27:8.53:0,9,111	0/0:30,0:29:50.87:0,51,892	0/0:17,0:17:21.05:0,21,419	0/0:16,0:16:18.01:0,18,240	0/1:23,1:24:7.80:8,0,810	1/1:5,7:11:9.03:141,9,0	1/1:21,4:25:8.94:111,9,0	0/0:17,0:21:8.76:0,9,100	1/1:5,3:8:9.03:141,9,0
chr10	48197079	.	AGTT	A	2705.28	PASS	AB=0.982;AC=23;AF=0.411;AN=56;BaseQRankSum=9.031;DP=517;FS=27.203;HRun=0;HaplotypeScore=106.5833;InbreedingCoeff=0.1857;MQ=65.26;MQ0=0;MQRankSum=-3.600;QD=7.93;ReadPosRankSum=4.552;VQSLOD=1.1915;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:61.70:0,62,886	0/0:10,0:10:23.98:0,24,364	0/0:12,0:11:15.69:0,16,191	0/0:15,0:14:20.40:0,20,298	0/1:23,1:24:40.16:137,0,40	0/0:11,0:11:33.01:0,33,512	0/0:18,0:18:48.14:0,48,803	0/1:32,1:33:77.15:77,0,177	0/0:21,0:21:54.03:0,54,832	0/1:21,0:21:5.27:155,0,5	1/1:12,0:12:18.92:114,19,0	0/0:11,0:11:4.22:0,4,12	0/1:20,0:20:20.91:21,0,56	0/1:16,1:17:99:123,0,102	0/0:21,0:21:57.07:0,57,836	0/0:15,1:16:32.34:0,32,167	0/1:32,0:32:47.52:152,0,48	0/1:12,0:12:12.55:58,0,13	1/1:9,0:9:24.03:269,24,0	1/1:28,0:28:62.88:656,63,0	1/1:7,0:7:9.02:95,9,0	0/1:24,0:24:22.05:22,0,99	0/1:23,0:23:11.79:65,0,12	0/0:12,0:12:13.88:0,14,83	0/1:22,1:23:65.44:193,0,65	0/1:29,1:30:63.19:198,0,63	1/1:17,0:17:42.07:473,42,0	1/1:9,0:9:20.53:89,21,0
chr10	48197080	.	GTTGTT	G	2313.01	PASS	AB=0.987;AC=13;AF=0.232;AN=56;BaseQRankSum=6.278;DP=519;FS=6.800;HRun=0;HaplotypeScore=128.9945;InbreedingCoeff=0.6785;MQ=65.42;MQ0=0;MQRankSum=-1.008;QD=17.26;ReadPosRankSum=3.285;VQSLOD=2.5286;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:30:75.11:0,75,1521	0/0:9,0:10:24.06:0,24,559	0/0:12,0:11:18.71:0,19,262	0/0:14,0:13:21.31:0,21,370	0/0:26,0:26:54.65:0,55,428	0/0:11,0:11:33.01:0,33,731	0/0:18,0:18:48.15:0,48,1206	0/0:33,0:33:72.95:0,73,582	0/0:21,0:21:54.16:0,54,1243	0/0:21,0:21:57.64:0,58,341	0/0:12,0:12:34.53:0,35,211	1/1:11,0:11:6.64:34,7,0	0/1:19,0:19:13.67:14,0,80	0/0:18,0:18:44.24:0,44,321	0/0:21,0:21:57.09:0,57,1192	0/0:16,0:16:36.08:0,36,415	0/0:33,0:33:75.34:0,75,475	0/0:12,0:12:31.82:0,32,178	1/1:0,7:8:24.06:418,24,0	1/1:1,25:27:61.03:1035,61,0	1/1:0,7:7:9.01:174,9,0	0/1:23,0:24:46.77:47,0,102	0/1:21,0:21:0.87:80,0,1	0/0:12,0:12:0.46:0,0,56	0/0:24,0:24:52.74:0,53,344	0/0:31,0:31:79.38:0,79,505	1/1:5,10:17:42.01:687,42,0	0/0:9,0:9:18.79:0,19,103
chr10	48197083	.	GTTT	G	6333.99	PASS	AB=1.000;AC=37;AF=0.661;AN=56;BaseQRankSum=7.027;DP=513;FS=2.613;HRun=15;HaplotypeScore=94.6050;InbreedingCoeff=0.8695;MQ=66.32;MQ0=0;MQRankSum=-3.628;QD=17.79;ReadPosRankSum=5.308;VQSLOD=4.1826;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:29:60.04:0,60,878	0/0:8,0:10:24.05:0,24,369	0/0:15,0:12:15.19:0,15,137	0/0:11,0:11:19.06:0,19,235	1/1:3,20:24:52.78:493,53,0	0/0:13,0:13:30.08:0,30,465	0/0:14,0:17:45.12:0,45,723	1/1:12,21:33:47.27:471,47,0	0/0:19,0:20:48.11:0,48,703	1/1:3,20:23:60.02:642,60,0	1/1:0,11:12:31.49:350,31,0	1/1:0,0:10:20.45:120,20,0	1/1:3,0:19:35:203,35,0	1/1:5,10:15:29.96:334,30,0	0/0:23,0:24:54.11:0,54,771	0/0:3,0:16:14.20:0,14,48	1/1:5,28:34:58.54:670,59,0	1/1:1,12:13:27.04:303,27,0	1/1:9,0:9:0.04:89,0,0	0/1:26,0:26:10.73:202,0,11	1/1:7,0:7:8.33:41,8,0	1/1:6,0:21:36.78:235,37,0	1/1:3,1:21:52.99:334,53,0	1/1:3,0:12:20.28:123,20,0	1/1:6,17:24:47.98:519,48,0	1/1:4,24:28:71.79:767,72,0	1/1:16,0:16:29.22:184,29,0	1/1:0,8:9:24:253,24,0
chr10	48198775	.	CAG	C	16848.69	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=12.675;DP=683;FS=0.672;HRun=0;HaplotypeScore=89.7198;InbreedingCoeff=0.9996;MQ=87.09;MQ0=1;MQRankSum=-3.087;QD=34.32;ReadPosRankSum=4.529;VQSLOD=7.2732;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,105,1783	0/0:9,0:9:27.09:0,27,473	0/0:19,0:19:48.14:0,48,779	0/0:27,0:27:66.21:0,66,1086	1/1:1,11:12:30.10:406,30,0	0/0:24,0:24:72.12:0,72,1166	0/0:24,0:24:63.15:0,63,1016	1/1:4,24:28:72.19:909,72,0	0/0:25,0:25:66.16:0,66,1040	1/1:3,19:22:57.19:771,57,0	1/1:2,15:17:34.17:594,34,0	1/1:0,31:31:87.29:1172,87,0	1/1:1,29:30:84.28:1136,84,0	1/1:0,19:18:48.16:648,48,0	0/0:26,0:26:72.25:0,72,1262	1/1:2,22:24:60.15:812,60,0	1/1:2,27:29:78.26:1055,78,0	1/1:4,32:36:93.31:1257,93,0	1/1:5,22:27:69.21:902,69,0	1/1:4,11:15:33.11:446,33,0	1/1:4,38:42:99:1502,111,0	1/1:2,19:21:48.16:649,48,0	1/1:1,21:22:50.67:669,51,0	1/1:3,38:41:99:1461,108,0	1/1:0,17:17:33.11:446,33,0	1/1:2,12:14:36.11:471,36,0	1/1:0,23:23:57.11:771,57,0	1/1:0,21:21:57.19:771,57,0
chr10	48198850	.	G	GC	750.03	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.939;DP=804;FS=7.446;HRun=2;HaplotypeScore=97.4824;InbreedingCoeff=0.9979;MQ=83.40;MQ0=0;MQRankSum=-0.361;QD=32.61;ReadPosRankSum=-2.652;VQSLOD=2.0955;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:67,0:67:99:0,199,2455	0/0:8,0:8:24.05:0,24,282	0/0:22,0:22:64.69:0,65,736	0/0:24,0:24:69.51:0,70,781	0/0:30,0:30:81.15:0,81,976	0/0:29,0:29:84.26:0,84,1041	0/0:34,0:34:99:0,99,1201	1/1:2,21:23:60.18:845,60,0	0/0:18,0:18:54.17:0,54,669	0/0:28,0:28:78.24:0,78,967	0/0:14,0:14:42.13:0,42,520	0/0:33,0:33:99:0,99,1214	0/0:36,0:36:99:0,102,1252	0/0:26,0:26:78.25:0,78,967	0/0:28,0:28:81.25:0,81,1004	0/0:18,0:18:48.15:0,48,595	0/0:25,0:25:75.22:0,75,916	0/0:31,0:31:81.24:0,81,991	0/0:38,0:38:99:0,102,1253	0/0:23,0:23:66.19:0,66,806	0/0:37,0:37:99:0,105,1301	0/0:30,0:30:81.23:0,81,1004	0/0:19,0:19:51.16:0,51,632	0/0:39,0:39:99:0,102,1265	0/0:21,0:21:60.19:0,60,744	0/0:30,0:30:90.28:0,90,1116	0/0:50,0:50:99:0,138,1709	0/0:23,0:23:69.22:0,69,855
chr10	48199414	.	GA	G	16827.21	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=11.464;DP=696;FS=3.188;HRun=3;HaplotypeScore=73.9076;InbreedingCoeff=0.9900;MQ=84.51;MQ0=0;MQRankSum=-4.054;QD=33.32;ReadPosRankSum=3.557;VQSLOD=5.4946;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,117,1652	0/0:17,0:17:48.16:0,48,690	0/0:25,0:25:55.15:0,55,807	0/0:16,0:16:41.99:0,42,525	1/1:1,19:20:60.19:741,60,0	0/0:17,0:17:51.17:0,51,734	0/0:33,0:33:93.31:0,93,1337	1/1:1,20:21:60.17:731,60,0	0/0:11,0:11:33.11:0,33,475	1/1:3,18:21:60.19:743,60,0	1/1:3,10:13:30.09:372,30,0	1/1:2,35:37:84.26:1041,84,0	1/1:0,30:30:90.28:1113,90,0	1/1:4,21:25:72.21:877,72,0	0/0:32,0:32:96.30:0,96,1348	1/1:0,21:21:63.20:781,63,0	1/1:0,34:34:99:1263,102,0	1/1:4,30:34:90.28:1112,90,0	1/1:1,16:17:45.14:556,45,0	1/1:2,18:20:45.07:536,45,0	1/1:1,53:54:99:1636,132,0	1/1:1,27:28:72.23:892,72,0	1/1:0,20:20:51.16:632,51,0	1/1:0,45:45:99:1561,126,0	1/1:1,8:9:27.07:322,27,0	1/1:5,21:26:75.22:916,75,0	1/1:1,25:26:72.23:892,72,0	1/1:1,3:4:9.03:112,9,0
chr10	48199492	.	GA	G	4500.78	PASS	AB=0.533;AC=17;AF=0.304;AN=56;BaseQRankSum=9.179;DP=652;FS=15.595;HRun=10;HaplotypeScore=83.8269;InbreedingCoeff=0.9011;MQ=80.37;MQ0=1;MQRankSum=-2.072;QD=22.73;ReadPosRankSum=2.231;VQSLOD=4.1944;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,104,1124	0/0:11,0:11:24.06:0,24,265	0/0:45,1:30:6.26:0,6,354	0/0:31,0:23:37.01:0,37,357	1/1:5,21:26:68.95:592,69,0	0/0:15,0:14:42.11:0,42,464	0/0:15,0:15:42.10:0,42,457	0/0:32,0:35:83.83:0,84,871	0/0:14,0:16:47.80:0,48,493	1/1:3,32:35:98.98:858,99,0	1/1:2,11:13:32.99:286,33,0	0/0:29,1:30:46.13:0,46,729	0/0:17,0:17:38.52:0,39,422	1/1:2,13:15:41.99:364,42,0	0/0:25,0:26:69.02:0,69,742	0/0:21,1:22:31.43:0,31,572	1/1:10,22:32:77.89:658,78,0	1/1:2,23:25:68.98:599,69,0	0/0:16,0:16:42.11:0,42,461	0/0:16,0:16:42.10:0,42,454	0/0:23,0:24:38.05:0,38,569	0/0:20,1:22:18.92:0,19,409	0/0:20,0:21:53.96:0,54,567	0/0:27,0:27:66.16:0,66,720	1/1:1,14:15:41.99:365,42,0	1/1:3,26:29:50.79:667,51,0	0/0:25,1:26:42.95:0,43,675	0/1:1,7:8:15.18:112,0,15
chr10	48200468	.	TTGTGTGTG	T	12760.94	PASS	AB=0.576;AC=17;AF=0.304;AN=56;BaseQRankSum=11.001;DP=573;FS=2.476;HRun=0;HaplotypeScore=185.8311;InbreedingCoeff=0.9107;MQ=75.27;MQ0=1;MQRankSum=-15.774;QD=68.24;ReadPosRankSum=-0.948;VQSLOD=4.9287;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,102,4279	0/0:13,0:13:33.11:0,33,1385	0/0:29,0:26:69.10:0,69,2249	0/0:31,0:29:78.74:0,79,2725	1/1:6,20:26:63.17:1521,63,0	0/0:18,0:18:48.16:0,48,1993	0/0:18,0:18:54.19:0,54,2224	0/0:24,0:24:66.09:0,66,2606	0/0:26,0:26:75.26:0,75,3195	1/1:6,25:31:81.28:2243,81,0	1/1:6,16:22:57.20:1452,57,0	0/0:23,0:23:56.83:0,57,2480	0/0:17,0:17:48.16:0,48,1901	1/1:3,21:24:66.23:1816,66,0	0/0:19,0:19:54.19:0,54,2240	0/0:8,0:8:15.05:0,15,569	1/1:7,8:15:21.03:506,21,0	1/1:2,6:8:18.06:499,18,0	0/0:14,0:13:30.10:0,30,1311	0/0:15,0:15:42.13:0,42,1603	0/0:15,0:15:36.12:0,36,1301	0/0:30,0:30:81.26:0,81,3281	0/0:18,0:18:51.16:0,51,1931	0/0:17,0:17:51.18:0,51,2167	1/1:3,30:33:99:2638,99,0	0/1:5,14:19:45.87:1359,0,46	0/0:14,0:14:42.13:0,42,1511	1/1:0,9:9:27.09:728,27,0
chr10	48200473	.	T	TTC	2015.40	PASS	AB=0.983;AC=9;AF=0.161;AN=56;BaseQRankSum=7.613;DP=564;FS=0.450;HRun=0;HaplotypeScore=162.1923;InbreedingCoeff=0.0822;MQ=72.77;MQ0=1;MQRankSum=-7.543;QD=11.52;ReadPosRankSum=-7.939;VQSLOD=1.6353;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,102,1644	0/0:13,0:13:39.09:0,39,579	0/0:29,0:26:68.49:0,68,1070	0/0:30,0:28:79.13:0,79,1198	1/1:24,1:25:32.83:652,33,0	0/0:18,0:18:51.17:0,51,820	0/0:18,0:18:54.18:0,54,868	0/0:25,0:25:66.23:0,66,1066	0/0:25,0:25:75.26:0,75,1218	0/1:29,0:29:99:155,0,132	0/1:20,1:21:16.06:423,0,16	0/0:27,0:27:69.22:0,69,1089	0/0:16,0:16:48.16:0,48,767	0/1:22,0:22:64.68:65,0,150	0/0:19,0:19:57.18:0,57,897	0/0:6,0:6:15.05:0,15,239	0/1:12,0:12:13.71:118,0,14	0/0:7,0:7:11.09:0,11,57	0/0:15,0:14:33.11:0,33,529	0/0:15,0:15:42.13:0,42,655	0/0:14,0:14:36.12:0,36,567	0/0:27,0:27:81.26:0,81,1286	0/0:18,0:18:54.17:0,54,840	0/0:18,0:18:54.18:0,54,872	0/1:33,1:33:99:416,0,123	0/1:19,1:20:99:162,0,159	0/0:14,0:14:42.13:0,42,645	0/1:12,0:12:28.92:171,0,29
chr10	48200489	.	T	TGGG	986.58	PASS	AB=0.645;AC=35;AF=0.625;AN=56;BaseQRankSum=12.148;DP=601;FS=3.388;HRun=8;HaplotypeScore=191.4615;InbreedingCoeff=0.5461;MQ=71.33;MQ0=1;MQRankSum=-9.021;QD=2.33;ReadPosRankSum=0.713;VQSLOD=-0.1646;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:78.18:0,78,995	0/0:13,0:13:33.06:0,33,418	0/0:34,0:33:28.45:0,28,623	0/1:32,0:30:5.78:6,0,481	1/1:0,0:32:15.26:33,15,0	0/0:17,0:17:42.11:0,42,536	0/0:16,0:16:39.11:0,39,513	1/1:11,0:19:22.93:157,23,0	0/0:23,0:24:61.73:0,62,810	1/1:9,0:31:28.43:77,28,0	1/1:5,0:18:9.97:21,10,0	0/1:4,0:31:25.93:26,0,31	1/1:2,0:19:18.50:41,18,0	1/1:4,0:28:31.87:104,32,0	0/0:21,0:21:54.14:0,54,695	1/1:0,7:9:12:146,12,0	1/1:2,0:17:15.57:35,16,0	1/1:1,0:7:6.23:13,6,0	1/1:8,1:10:6:83,6,0	0/0:9,4:16:0.26:0,0,1	1/1:2,0:9:5.98:46,6,0	0/1:4,0:27:10.25:28,0,10	1/1:5,0:16:13.71:30,14,0	0/1:5,0:20:14.50:15,0,21	1/1:5,0:40:35.59:118,36,0	0/1:7,0:26:10.52:39,0,11	1/1:7,9:18:8.61:144,9,0	1/1:4,0:12:9.97:22,10,0
chr10	48200902	.	A	ATTCTTTGTTTCT	17674.35	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-9.885;DP=841;FS=2.276;HRun=0;HaplotypeScore=264.0480;InbreedingCoeff=0.9854;MQ=59.23;MQ0=4;MQRankSum=-12.601;QD=54.38;ReadPosRankSum=-3.789;VQSLOD=3.8925;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:75.24:0,75,2422	0/0:13,0:13:27.09:0,27,932	0/0:28,0:26:30.10:0,30,718	0/0:22,0:20:20.96:0,21,563	0/0:27,0:27:63.12:0,63,1720	0/0:24,0:24:48.12:0,48,1317	0/0:34,0:34:69.20:0,69,2013	1/1:42,0:42:33.10:1397,33,0	0/0:32,0:32:69.21:0,69,2134	0/0:28,0:28:57:0,57,1650	0/0:25,0:25:66.18:0,66,2124	1/1:13,10:31:30.10:1755,30,0	1/1:15,11:31:33.01:1940,33,0	0/0:31,0:31:62.83:0,63,1992	0/0:35,0:35:69.18:0,69,2113	0/0:31,0:31:72.18:0,72,2120	0/0:43,0:43:99:0,99,2895	0/0:29,0:29:69.17:0,69,2179	1/1:13,6:29:57.13:1925,57,0	1/1:10,10:29:42:1984,42,0	1/1:14,0:14:9.03:340,9,0	1/1:16,23:49:61.05:3256,61,0	1/1:20,11:35:34.83:1897,35,0	1/1:19,11:40:25.33:1250,25,0	0/0:23,0:23:60.14:0,60,1716	0/0:41,0:41:84.28:0,84,2795	1/1:14,10:24:28.53:1929,29,0	0/0:8,0:8:12.04:0,12,420
chr10	48202999	.	T	TA	2318.92	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-8.434;DP=679;FS=10.624;HRun=9;HaplotypeScore=68.4244;InbreedingCoeff=0.9935;MQ=75.85;MQ0=0;MQRankSum=1.286;QD=24.67;ReadPosRankSum=-0.113;VQSLOD=3.8463;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,105,905	0/0:14,0:14:41.97:0,42,359	0/0:18,0:18:19.77:0,20,215	0/0:14,0:13:14.04:0,14,146	0/0:29,0:29:74.95:0,75,644	0/0:25,0:25:62.97:0,63,544	0/0:28,0:29:77.02:0,77,657	0/0:24,0:24:53.96:0,54,466	0/0:20,0:20:50.98:0,51,443	0/0:32,0:32:74.97:0,75,649	0/0:20,0:22:57.72:0,58,462	1/1:3,23:26:37.12:631,37,0	1/1:2,19:21:60.11:650,60,0	0/0:20,0:20:47.96:0,48,417	0/0:24,0:24:56.95:0,57,487	0/0:29,0:29:65.97:0,66,573	0/0:40,0:40:99:0,102,878	0/0:30,1:31:86.97:0,87,755	0/0:17,0:18:44.01:0,44,366	0/0:20,0:20:53.98:0,54,468	0/0:35,0:34:95.90:0,96,821	1/1:2,20:22:53.85:584,54,0	1/1:2,9:11:23.85:265,24,0	1/1:1,13:14:33.09:365,33,0	0/0:20,0:19:47.97:0,48,417	0/0:30,0:30:77.96:0,78,673	0/0:35,0:35:92.86:0,93,789	0/0:17,0:17:50.94:0,51,432
chr10	48204066	.	C	CAG	1234.49	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=2.725;DP=570;FS=6.323;HRun=0;HaplotypeScore=105.2967;InbreedingCoeff=0.9174;MQ=76.28;MQ0=5;MQRankSum=-5.778;QD=18.70;ReadPosRankSum=-5.053;VQSLOD=1.9513;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,123,1927	0/0:9,0:9:24.07:0,24,354	0/0:37,0:30:81.24:0,81,1161	0/0:38,0:31:85.80:0,86,1041	0/0:20,0:19:30.50:0,30,393	0/0:33,0:33:96.28:0,96,1471	0/0:33,0:33:90.26:0,90,1377	0/0:26,0:26:67.90:0,68,916	0/0:35,0:35:99:0,105,1575	0/0:12,0:11:33.09:0,33,412	0/0:9,0:9:11.22:0,11,113	1/1:0,17:18:24.06:284,24,0	1/1:6,9:15:27.96:420,28,0	0/0:20,0:20:8.27:0,8,408	0/0:22,0:22:63.17:0,63,979	0/0:16,0:15:32.67:0,33,246	0/0:17,0:16:35.88:0,36,384	0/0:21,0:21:41.70:0,42,555	0/0:22,0:22:56.01:0,56,740	0/0:14,0:14:14.38:0,14,177	0/0:22,0:21:5.98:0,6,81	1/1:3,7:10:18.05:233,18,0	1/1:1,8:10:9.03:107,9,0	1/1:9,3:13:23.81:359,24,0	0/0:15,0:14:30.02:0,30,336	0/0:21,0:20:48.25:0,48,570	0/0:13,0:13:11.76:0,12,98	0/0:5,0:5:12.04:0,12,187
chr10	48204426	.	AAATT	A	3642.30	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=11.803;DP=545;FS=5.237;HRun=0;HaplotypeScore=87.0705;InbreedingCoeff=0.8586;MQ=68.97;MQ0=0;MQRankSum=-0.417;QD=33.11;ReadPosRankSum=3.947;VQSLOD=3.1779;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:45.15:0,45,1149	0/0:16,0:16:48.16:0,48,1151	0/0:5,0:5:6.02:0,6,102	0/1:13,0:13:13.69:14,0,287	0/0:26,0:26:66.23:0,66,1682	0/0:20,0:20:54.19:0,54,1323	0/0:14,0:14:36.11:0,36,864	0/0:35,0:35:78.24:0,78,1778	0/0:18,0:18:48.15:0,48,1148	0/0:32,0:32:78.27:0,78,1928	0/0:18,0:18:54.14:0,54,1256	1/1:2,21:23:54.18:931,54,0	1/1:2,22:24:48.16:841,48,0	0/0:13,0:13:36.10:0,36,837	0/0:18,0:18:51.18:0,51,1299	0/0:17,0:17:48.16:0,48,1226	0/0:31,0:31:81.27:0,81,1923	0/0:26,0:26:69.24:0,69,1746	0/0:22,0:22:60.20:0,60,1408	0/0:19,0:19:43.35:0,43,970	0/0:5,0:5:9.03:0,9,230	1/1:4,15:19:45.15:785,45,0	1/1:3,12:15:30.06:493,30,0	1/1:3,13:16:33.11:578,33,0	0/0:24,0:24:54.19:0,54,1329	0/0:28,0:28:66.23:0,66,1663	0/0:19,0:19:57.20:0,57,1428	0/0:11,0:11:33.11:0,33,814
chr10	48205200	.	GA	G	90.22	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.684;DP=593;FS=1.387;HRun=10;HaplotypeScore=57.2599;InbreedingCoeff=0.9107;MQ=75.94;MQ0=1;MQRankSum=0.230;QD=8.20;ReadPosRankSum=1.399;VQSLOD=1.7587;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:87.24:0,87,962	0/0:12,0:12:30.08:0,30,330	0/0:14,0:14:6.83:0,7,209	0/0:17,0:15:23.05:0,23,209	0/0:25,0:25:54.09:0,54,575	0/0:30,0:30:81.19:0,81,884	0/0:18,0:18:45.12:0,45,497	0/0:31,0:31:66.16:0,66,710	1/1:2,9:11:20.99:182,21,0	0/0:19,0:19:48.13:0,48,531	0/0:19,0:19:51.13:0,51,557	0/0:25,0:25:60.16:0,60,664	0/0:14,0:14:39.11:0,39,431	0/0:22,0:22:54.05:0,54,563	0/0:29,0:29:78.21:0,78,863	0/0:24,0:24:66.01:0,66,687	0/0:17,0:17:45.12:0,45,498	0/0:20,0:20:48.13:0,48,531	0/0:21,0:21:51.14:0,51,564	0/0:31,0:31:78.21:0,78,863	0/0:16,0:16:39.11:0,39,431	0/0:19,0:19:42.11:0,42,457	0/0:17,0:17:45.12:0,45,498	0/0:19,0:19:48.13:0,48,531	0/0:26,0:26:74.76:0,75,779	0/0:22,0:22:54.15:0,54,597	0/0:25,0:25:72.14:0,72,774	0/0:15,0:15:42.11:0,42,457
chr10	48206422	.	TCACG	T	20834.35	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=16.538;DP=860;FS=1.787;HRun=0;HaplotypeScore=165.5826;InbreedingCoeff=0.9963;MQ=64.62;MQ0=4;MQRankSum=-2.593;QD=33.55;ReadPosRankSum=5.665;VQSLOD=4.6780;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:57:99:0,141,3223	0/0:11,0:11:32.90:0,33,742	0/0:16,0:15:30.10:0,30,709	0/0:14,0:13:20.96:0,21,469	1/1:1,19:19:24.08:403,24,0	0/0:18,0:18:48.16:0,48,1172	0/0:51,0:51:99:0,111,2573	1/1:7,18:25:57.14:878,57,0	0/0:31,0:31:84.29:0,84,2067	1/1:5,28:33:81.24:1321,81,0	1/1:5,9:14:18.06:313,18,0	1/1:6,31:37:75.26:1304,75,0	1/1:8,28:36:69.17:1151,69,0	1/1:5,36:41:69.22:1200,69,0	0/0:27,0:27:72.25:0,72,1822	0/0:14,0:14:42.03:0,42,837	1/1:1,31:32:72.25:1238,72,0	1/1:5,28:32:69.24:1199,69,0	1/1:11,24:35:75.22:1236,75,0	1/1:3,18:21:39.13:678,39,0	1/1:22,97:118:99:3878,226,0	1/1:2,24:26:54.05:870,54,0	1/1:2,18:19:39.05:643,39,0	1/1:5,43:48:93.32:1617,93,0	1/1:1,22:23:48.03:766,48,0	1/1:5,27:32:84.20:1319,84,0	1/1:3,14:17:30.10:522,30,0	1/1:1,8:9:18.06:299,18,0
chr10	48206805	.	AT	A	1259.05	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=7.574;DP=520;FS=1.819;HRun=9;HaplotypeScore=52.7879;InbreedingCoeff=0.9248;MQ=65.02;MQ0=0;MQRankSum=1.615;QD=20.98;ReadPosRankSum=-0.083;VQSLOD=4.0510;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:57.17:0,57,658	0/0:15,0:15:42.12:0,42,485	0/0:6,0:6:12.03:0,12,134	0/0:5,0:4:2.59:0,3,34	0/0:27,0:28:78.09:0,78,871	0/0:12,0:12:33.07:0,33,368	0/0:7,0:7:21.06:0,21,242	0/0:35,0:35:77.87:0,78,322	0/0:20,0:20:54.11:0,54,598	0/0:18,0:18:48.14:0,48,554	0/0:24,0:24:72.21:0,72,830	1/1:1,14:15:42.02:384,42,0	1/1:0,15:15:45.02:412,45,0	0/0:19,0:19:48.12:0,48,534	0/0:15,0:15:42.12:0,42,485	0/0:14,0:14:42.12:0,42,485	0/0:31,0:31:84.24:0,84,959	0/0:20,0:20:57.17:0,57,658	0/0:23,0:23:66.19:0,66,754	0/0:17,0:17:45.13:0,45,519	0/0:10,0:10:24.07:0,24,277	1/1:0,4:4:6:55,6,0	1/1:3,11:14:33.02:302,33,0	1/1:2,10:12:30.01:275,30,0	0/0:26,0:26:63.19:0,63,727	0/0:31,0:31:84.25:0,84,969	0/0:34,1:35:74.80:0,75,1087	0/0:28,0:28:75.22:0,75,865
chr10	48206812	.	T	TG	1194.20	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-8.387;DP=528;FS=0.000;HRun=0;HaplotypeScore=54.7961;InbreedingCoeff=0.9230;MQ=68.35;MQ0=0;MQRankSum=1.843;QD=37.32;ReadPosRankSum=-2.706;VQSLOD=2.3443;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:60.18:0,60,818	0/0:15,0:15:45.14:0,45,613	0/0:9,0:9:24.03:0,24,271	0/0:7,0:5:8.96:0,9,95	0/0:28,0:28:77.16:0,77,1077	0/0:12,0:12:34.35:0,34,449	0/0:7,0:7:21.07:0,21,293	1/1:1,31:32:93.28:1289,93,0	0/0:18,0:18:54.13:0,54,716	0/0:21,0:21:60.18:0,60,780	0/0:29,0:29:81.21:0,81,1068	0/0:15,0:15:40.94:0,41,234	0/0:16,0:16:46.24:0,46,259	0/0:19,0:19:57.11:0,57,710	0/0:15,0:15:45.14:0,45,613	0/0:16,0:16:48.15:0,48,641	0/0:30,0:30:87.25:0,87,1178	0/0:21,0:21:57.19:0,57,795	0/0:24,0:24:72.21:0,72,958	0/0:17,0:17:51.15:0,51,677	0/0:9,0:9:27.08:0,27,360	0/0:6,0:6:14.82:0,15,108	0/0:11,0:11:32.17:0,32,184	0/0:12,0:12:35.21:0,35,213	0/0:26,0:26:78.22:0,78,1014	0/0:30,0:30:90.29:0,90,1226	0/0:35,0:35:99:0,105,1379	0/0:28,0:28:84.15:0,84,1110
chr10	48209996	.	TG	T	4545.18	PASS	AB=0.992;AC=46;AF=0.821;AN=56;BaseQRankSum=-1.967;DP=536;FS=5.980;HRun=1;HaplotypeScore=56.3667;InbreedingCoeff=0.0824;MQ=42.88;MQ0=102;MQRankSum=-1.869;QD=9.29;ReadPosRankSum=-1.524;VQSLOD=1.6698;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:34,0:32:99:115,0,220	0/1:8,0:5:7.76:8,0,8	0/0:47,0:6:7.52:0,8,63	0/1:54,1:8:4.89:5,0,60	1/1:19,0:17:42.45:319,42,0	0/1:14,0:11:52.16:52,0,115	0/1:9,0:9:11.11:11,0,128	1/1:14,0:10:26.21:214,26,0	0/1:20,1:21:95.65:96,0,134	1/1:20,0:12:35.96:317,36,0	1/1:10,0:8:17.79:129,18,0	1/1:12,0:12:20.90:100,21,0	1/1:10,0:9:25.84:192,26,0	1/1:10,0:9:25.93:177,26,0	0/1:25,0:21:68.15:118,0,68	0/1:21,0:20:29.05:29,0,223	1/1:17,0:14:37.15:248,37,0	1/1:21,0:17:30.44:206,30,0	1/1:36,1:8:20.92:167,21,0	1/1:1,13:13:23.77:164,24,0	1/1:11,0:6:11.90:87,12,0	1/1:10,0:8:21.81:184,22,0	1/1:13,0:11:25.34:180,25,0	1/1:16,0:14:34.09:222,34,0	1/1:14,0:14:40.15:310,40,0	1/1:9,12:15:38.12:292,38,0	1/1:20,1:20:53.85:438,54,0	1/1:12,0:7:20.89:165,21,0
chr10	48210026	.	TG	T	4184.73	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-3.509;DP=402;FS=2.031;HRun=3;HaplotypeScore=46.6694;InbreedingCoeff=0.7511;MQ=32.17;MQ0=58;MQRankSum=3.379;QD=11.59;ReadPosRankSum=1.985;VQSLOD=1.8003;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:30:58.51:340,59,0	1/1:9,0:6:13.19:79,13,0	0/0:16,0:3:5.79:0,6,38	0/0:24,0:3:5.30:0,5,53	1/1:12,0:10:23.39:135,23,0	1/1:12,0:10:17.25:89,17,0	1/1:7,0:5:12.05:62,12,0	1/1:23,0:21:59.43:403,59,0	1/1:13,2:15:33.17:214,33,0	1/1:13,0:9:26.70:177,27,0	1/1:12,0:10:23.54:148,24,0	1/1:13,0:13:23.70:164,24,0	1/1:10,0:9:17.75:116,18,0	1/1:13,0:11:23.72:166,24,0	1/1:17,0:19:40.04:244,40,0	1/1:7,0:9:12.04:52,12,0	1/1:11,0:9:14.65:90,15,0	1/1:19,0:13:32.71:232,33,0	1/1:2,13:14:41.36:282,41,0	1/1:9,0:9:17.65:106,18,0	1/1:9,0:9:17.56:102,18,0	1/1:14,0:11:26.46:160,26,0	1/1:6,2:7:8.82:53,9,0	1/1:14,0:12:14.80:99,15,0	1/1:14,0:12:32.34:195,32,0	1/1:18,0:14:35.48:228,35,0	1/1:13,0:10:26.46:165,26,0	1/1:12,0:7:11.76:85,12,0
chr10	48213242	.	G	GGC	5827.03	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-10.788;DP=687;FS=2.317;HRun=0;HaplotypeScore=80.8776;InbreedingCoeff=0.9993;MQ=57.32;MQ0=6;MQRankSum=5.739;QD=45.88;ReadPosRankSum=2.717;VQSLOD=6.5238;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:90.31:0,90,1378	0/0:8,0:8:24.07:0,24,346	0/0:29,0:16:39.10:0,39,538	0/0:24,0:20:57.18:0,57,816	0/0:26,0:26:78.23:0,78,1148	0/0:17,0:17:51.16:0,51,760	0/0:36,0:36:99:0,105,1543	0/0:25,0:24:64.45:0,64,950	0/0:29,0:29:87.28:0,87,1309	0/0:20,0:20:57.18:0,57,851	0/0:12,0:12:30.10:0,30,456	1/1:1,23:24:51.17:984,51,0	1/1:0,30:31:84.29:1616,84,0	0/0:27,0:27:75.24:0,75,1127	0/0:27,0:27:75.24:0,75,1123	0/0:33,0:33:96.30:0,96,1426	0/0:29,0:29:87.27:0,87,1309	0/0:22,0:22:63.18:0,63,939	0/0:26,0:25:75.22:0,75,1087	0/0:24,0:24:63.20:0,63,943	0/0:38,0:38:99:0,114,1696	1/1:2,14:18:39.13:742,39,0	1/1:2,16:19:42.14:808,42,0	1/1:1,34:33:87.30:1677,87,0	0/0:22,0:22:63.21:0,63,962	0/0:18,0:18:51.17:0,51,781	0/0:22,0:22:63.20:0,63,934	0/0:12,0:12:36.12:0,36,551
chr10	48213564	.	C	CTA	1306.87	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-2.847;DP=694;FS=0.000;HRun=0;HaplotypeScore=104.8994;InbreedingCoeff=0.9913;MQ=84.12;MQ0=0;MQRankSum=-4.208;QD=42.16;ReadPosRankSum=-4.030;VQSLOD=3.9354;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:87.25:0,87,1159	0/0:12,0:12:33.10:0,33,436	0/0:29,0:30:71.93:0,72,1004	0/0:13,0:13:33.06:0,33,410	0/0:30,0:30:75.25:0,75,1030	0/0:28,0:28:81.25:0,81,1094	0/0:22,0:22:60.19:0,60,808	1/1:9,22:31:81.27:1402,81,0	0/0:24,0:24:72.22:0,72,969	0/0:28,0:27:75.24:0,75,1008	0/0:16,0:16:42.14:0,42,576	0/0:15,0:15:42.14:0,42,577	0/0:24,0:24:60.20:0,60,823	0/0:16,0:16:33.11:0,33,453	0/0:24,0:24:66.19:0,66,872	0/0:29,0:29:81.26:0,81,1097	0/0:27,0:27:75.23:0,75,1010	0/0:31,0:31:81.27:0,81,1111	0/0:24,0:24:63.20:0,63,850	0/0:38,0:38:99:0,102,1378	0/0:25,0:25:72.24:0,72,989	0/0:30,0:30:78.23:0,78,1036	0/0:31,0:31:87.26:0,87,1162	0/0:17,0:17:51.15:0,51,681	0/0:34,0:34:87.24:0,87,1144	0/0:25,0:25:69.23:0,69,948	0/0:32,0:32:90.30:0,90,1236	0/0:7,0:7:18.06:0,18,247
chr10	48213578	.	G	GA	8991.90	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-11.510;DP=713;FS=0.970;HRun=10;HaplotypeScore=75.9389;InbreedingCoeff=0.9946;MQ=81.10;MQ0=0;MQRankSum=-2.037;QD=23.48;ReadPosRankSum=0.550;VQSLOD=5.4571;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:77.89:0,78,640	0/0:12,0:12:35.96:0,36,296	0/0:25,0:25:26.93:0,27,219	0/0:13,0:14:14.76:0,15,167	1/1:7,28:35:75.99:777,76,0	0/0:26,0:26:62.90:0,63,514	0/0:23,0:23:59.87:0,60,486	1/1:11,19:31:59.98:621,60,0	0/0:25,1:26:33.92:0,34,485	1/1:7,26:34:78.01:804,78,0	1/1:3,17:20:51.08:528,51,0	1/1:5,10:15:27.07:288,27,0	1/1:5,18:23:57.10:589,57,0	1/1:7,13:21:16.95:365,17,0	0/0:20,0:20:47.16:0,47,377	0/0:30,0:30:80.90:0,81,665	1/1:2,28:31:75.02:782,75,0	1/1:5,28:33:25.90:686,26,0	0/0:26,0:26:59.04:0,59,489	0/0:35,1:38:67.87:0,68,736	0/0:24,0:24:62.92:0,63,517	1/1:5,24:29:72.18:768,72,0	1/1:5,27:33:78.17:820,78,0	1/1:1,15:16:45.11:480,45,0	1/1:5,23:28:60.15:640,60,0	1/1:3,22:25:63.16:672,63,0	0/0:35,0:36:88.91:0,89,720	1/1:3,5:9:17.88:174,18,0
chr10	48214144	.	AT	A	1479.71	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.174;DP=445;FS=14.491;HRun=4;HaplotypeScore=44.7865;InbreedingCoeff=0.6937;MQ=71.27;MQ0=1;MQRankSum=-1.483;QD=33.63;ReadPosRankSum=-2.401;VQSLOD=1.6573;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:66.21:0,66,930	0/0:7,0:7:21.07:0,21,302	0/0:14,0:10:26.79:0,27,261	0/0:13,0:8:16.57:0,17,169	0/0:36,0:36:99:0,105,1489	0/0:23,0:23:69.23:0,69,989	0/0:5,0:5:15.03:0,15,197	1/1:1,43:44:99:1574,129,0	0/0:10,0:10:30.10:0,30,430	0/0:14,0:14:42.14:0,42,604	0/0:17,0:17:51.17:0,51,732	0/0:6,0:6:18.05:0,18,239	0/0:14,0:14:42.14:0,42,602	0/0:13,0:13:39.12:0,39,535	0/0:8,0:8:21.07:0,21,301	0/0:15,0:15:45.15:0,45,646	0/0:39,0:39:99:0,117,1683	0/0:16,0:16:42.14:0,42,598	0/0:19,0:19:57.18:0,57,803	0/0:13,0:13:36.12:0,36,517	0/0:2,0:2:6.02:0,6,86	0/0:2,0:2:6.02:0,6,86	0/0:9,0:9:27.09:0,27,385	0/0:1,0:1:3:0,3,25	0/0:23,0:23:69.23:0,69,993	0/0:22,0:22:66.20:0,66,918	0/0:21,0:21:60.20:0,60,864	0/0:15,0:15:45.15:0,45,648
chr10	48215317	.	A	ACC	52.43	PASS	AB=0.830;AC=4;AF=0.071;AN=56;BaseQRankSum=1.011;DP=490;FS=18.472;HRun=0;HaplotypeScore=79.1607;InbreedingCoeff=-0.0871;MQ=45.28;MQ0=30;MQRankSum=-0.637;QD=1.05;ReadPosRankSum=-0.600;VQSLOD=0.1681;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:36:87.20:0,87,1109	0/0:4,0:4:11.63:0,12,127	0/0:12,0:3:8.77:0,9,63	0/0:10,0:5:4.26:0,4,50	0/0:30,0:28:77.23:0,77,969	0/0:25,0:23:57.12:0,57,768	0/0:14,0:13:39.13:0,39,530	0/0:31,0:31:80.91:0,81,1083	0/0:10,0:10:30.07:0,30,370	0/0:21,0:21:63.19:0,63,823	0/0:16,0:14:41.65:0,42,469	0/0:18,3:21:14.45:0,14,476	0/1:8,2:11:56.96:57,0,173	0/0:11,0:10:30.09:0,30,397	0/0:20,0:20:50.12:0,50,591	0/0:17,0:16:45.07:0,45,579	0/0:24,0:21:51.63:0,52,634	0/0:17,0:12:26.13:0,26,278	0/0:26,0:26:66.22:0,66,916	0/0:17,0:17:42.13:0,42,560	0/0:4,0:4:12.04:0,12,160	0/1:7,1:8:27.90:28,0,162	0/1:15,0:14:11.60:12,0,158	0/1:8,5:15:63.04:63,0,84	0/0:17,0:15:42.09:0,42,527	0/0:21,0:21:56.19:0,56,697	0/0:15,0:14:36.12:0,36,525	0/0:18,0:14:36.10:0,36,450
chr10	48216743	.	T	TACAC	511.15	PASS	AB=0.909;AC=13;AF=0.250;AN=52;BaseQRankSum=-0.086;DP=462;FS=24.949;HRun=0;HaplotypeScore=91.0475;InbreedingCoeff=0.2491;MQ=64.47;MQ0=26;MQRankSum=-2.109;QD=3.53;ReadPosRankSum=-2.746;VQSLOD=-0.1288;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:39.08:0,39,505	0/0:5,0:5:6.02:0,6,89	./.	./.	0/0:17,0:17:11.38:0,11,123	0/0:18,0:18:21.05:0,21,277	0/0:23,0:22:8.62:0,9,118	0/0:19,0:19:3.66:0,4,74	0/0:6,0:5:12.03:0,12,162	0/1:14,0:15:45.60:46,0,57	0/1:13,0:12:12.10:12,0,94	1/1:4,4:10:3.01:71,3,0	1/1:8,0:8:8.95:129,9,0	0/0:9,0:9:5.84:0,6,69	0/0:19,0:19:30.57:0,31,460	0/0:4,0:4:6.01:0,6,69	0/1:29,0:26:4.81:5,0,303	0/0:13,0:13:5.75:0,6,219	0/0:11,0:11:9.03:0,9,117	0/0:9,0:9:14.26:0,14,168	0/0:30,0:30:24.55:0,25,356	1/1:14,0:14:3.01:43,3,0	1/1:8,1:8:2.75:70,3,0	0/1:21,10:37:6.70:268,0,7	0/0:9,0:9:6.62:0,7,59	0/1:9,0:9:7.64:8,0,109	0/0:11,0:11:15.03:0,15,193	0/0:5,0:4:3.01:0,3,34
chr10	48216787	.	CAT	C	1773.51	PASS	AB=0.983;AC=13;AF=0.232;AN=56;BaseQRankSum=-2.737;DP=525;FS=11.648;HRun=0;HaplotypeScore=69.8486;InbreedingCoeff=0.3418;MQ=59.63;MQ0=14;MQRankSum=0.629;QD=10.31;ReadPosRankSum=0.522;VQSLOD=2.0628;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,102,1012	0/0:10,0:10:20.96:0,21,172	0/0:13,0:4:12:0,12,120	0/0:11,0:5:14.99:0,15,139	0/1:16,1:16:23.90:198,0,24	0/0:21,0:21:45.45:0,45,472	0/0:10,0:9:3.63:0,4,93	0/0:21,0:21:41.97:0,42,367	0/0:14,0:13:29.93:0,30,293	1/1:18,0:18:2.07:241,2,0	0/1:20,0:19:33.70:253,0,34	0/0:15,0:15:23.75:0,24,281	0/0:12,0:12:30.01:0,30,296	0/1:18,0:18:14.03:229,0,14	0/0:21,0:21:50.55:0,51,607	0/0:12,0:12:32.97:0,33,293	0/1:31,1:29:99:209,0,109	0/1:18,0:18:48.94:146,0,49	0/0:22,0:22:57.47:0,57,506	0/0:12,0:13:21.92:0,22,176	0/0:27,0:27:53.98:0,54,571	0/0:21,0:21:50.90:0,51,500	0/0:17,0:16:29.51:0,30,235	0/0:30,0:29:47.04:0,47,450	1/1:21,0:21:4:287,4,0	1/1:23,0:22:28.76:328,29,0	0/0:18,0:18:40.95:0,41,441	1/1:1,4:4:3.01:39,3,0
chr10	48217344	.	TACC	T	1758.63	PASS	AB=0.876;AC=17;AF=0.304;AN=56;BaseQRankSum=10.284;DP=390;FS=44.792;HRun=0;HaplotypeScore=75.9881;InbreedingCoeff=-0.0858;MQ=65.06;MQ0=0;MQRankSum=-1.927;QD=7.78;ReadPosRankSum=8.382;VQSLOD=0.5050;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:46.02:0,46,682	0/0:3,0:3:5.88:0,6,36	0/0:11,0:9:18.72:0,19,169	0/0:11,0:7:8.59:0,9,84	0/1:7,2:9:3.36:155,0,3	0/0:14,0:14:14.12:0,14,453	0/0:20,0:20:53.36:0,53,747	0/0:11,0:11:29.94:0,30,311	0/0:5,0:5:15.04:0,15,309	0/1:13,7:20:99:182,0,131	0/1:8,0:8:22.22:22,0,54	0/1:11,2:13:52.27:132,0,52	0/1:13,2:15:40.86:207,0,41	0/1:16,0:16:65.07:99,0,65	0/0:11,0:11:27.04:0,27,398	0/0:18,0:18:54.12:0,54,988	0/1:12,2:14:54.83:94,0,55	1/1:10,0:10:26.06:157,26,0	0/0:9,0:11:9.97:0,10,261	0/0:10,0:12:26.25:0,26,254	0/1:23,0:29:7.82:8,0,342	0/1:19,0:19:99:109,0,153	0/1:7,2:10:68.34:97,0,68	0/1:15,1:16:73.44:73,0,123	0/1:16,3:19:62.16:188,0,62	0/1:18,6:24:99:330,0,116	0/0:10,0:12:24.78:0,25,347	1/1:4,0:4:11.76:75,12,0
chr10	48217345	.	ACCC	A	3839.17	PASS	AB=0.958;AC=31;AF=0.554;AN=56;BaseQRankSum=4.388;DP=385;FS=22.870;HRun=13;HaplotypeScore=70.8224;InbreedingCoeff=0.7678;MQ=64.76;MQ0=0;MQRankSum=-0.998;QD=15.80;ReadPosRankSum=7.583;VQSLOD=0.0717;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:43.29:0,43,633	0/0:2,0:2:0:0,0,0	0/1:13,0:10:26.14:26,0,127	0/1:10,0:6:0.02:0,0,0	1/1:6,3:9:18.01:206,18,0	0/0:14,0:14:24.04:0,24,363	0/0:20,0:20:38.26:0,38,507	0/0:11,0:11:8.99:0,9,113	0/0:5,0:5:12.04:0,12,216	1/1:14,5:19:30.02:362,30,0	1/1:2,4:6:2.99:32,3,0	1/1:5,6:12:26.97:309,27,0	1/1:7,8:15:33.04:400,33,0	1/1:5,11:16:20.98:242,21,0	0/0:10,0:10:18.04:0,18,225	0/0:19,0:19:48.16:0,48,774	1/1:5,9:14:18.01:219,18,0	1/1:0,10:10:27.08:328,27,0	0/0:12,0:12:17.98:0,18,208	0/0:11,0:12:23.96:0,24,228	0/1:24,0:28:6.24:6,0,91	1/1:12,7:19:26.87:327,27,0	1/1:8,2:10:14.87:163,15,0	1/1:9,7:16:14.98:182,15,0	1/1:8,10:19:29.94:345,30,0	1/1:12,11:23:45.01:546,45,0	0/0:10,0:12:26.94:0,27,284	1/1:0,4:4:12.04:146,12,0
chr10	48217688	.	T	TTGTC	625.47	PASS	AB=0.910;AC=4;AF=0.074;AN=54;BaseQRankSum=-4.550;DP=605;FS=2.975;HRun=0;HaplotypeScore=137.0937;InbreedingCoeff=-0.0984;MQ=59.58;MQ0=3;MQRankSum=2.082;QD=7.36;ReadPosRankSum=3.408;VQSLOD=2.8604;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:69.12:0,69,914	0/0:5,0:5:9:0,9,114	./.	0/0:19,0:17:4.74:0,5,22	0/0:31,0:31:27:0,27,248	0/1:10,11:23:16.72:552,0,17	0/0:29,0:29:42.09:0,42,523	0/0:36,0:36:11.56:0,12,92	0/0:22,0:22:45.03:0,45,542	0/0:25,0:25:33.01:0,33,294	0/0:15,0:15:18.02:0,18,168	0/1:16,0:16:22.98:23,0,157	0/0:22,0:22:26.98:0,27,248	0/0:19,0:19:23.93:0,24,207	0/0:32,0:32:63.11:0,63,826	0/0:17,0:17:39.09:0,39,542	0/0:25,0:25:11.95:0,12,101	0/0:16,0:16:6:0,6,52	0/0:28,0:28:26.95:0,27,235	0/0:23,0:22:18:0,18,160	0/0:14,0:14:3:0,3,25	0/1:20,0:20:23.93:24,0,337	0/0:14,0:14:18.01:0,18,168	0/1:26,0:26:99:134,0,191	0/0:26,0:26:14.66:0,15,111	0/0:17,0:18:27.02:0,27,248	0/0:20,0:20:27.03:0,27,251	0/0:6,0:6:5.99:0,6,51
chr10	48217718	.	GTCTGTCTGTC	G	3789.82	PASS	AB=0.617;AC=15;AF=0.268;AN=56;BaseQRankSum=8.560;DP=684;FS=22.257;HRun=0;HaplotypeScore=196.9857;InbreedingCoeff=0.7196;MQ=54.43;MQ0=44;MQRankSum=-0.791;QD=17.96;ReadPosRankSum=-1.510;VQSLOD=1.3680;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:71.67:0,72,3730	0/0:8,0:8:4.99:0,5,602	0/0:15,0:12:30.37:0,30,337	0/0:28,0:12:1.52:0,2,273	1/1:41,0:33:1.01:21,1,0	0/0:25,0:25:48.16:0,48,1693	0/0:27,0:26:72.20:0,72,2801	0/1:11,18:25:4.48:526,0,4	0/0:26,0:26:78.20:0,78,2307	1/1:29,0:26:18.56:344,19,0	0/0:20,0:19:3.77:0,4,6	0/0:14,0:14:41.55:0,42,1357	0/0:22,0:22:56.26:0,56,1624	0/0:19,0:19:8.64:0,9,61	0/0:35,0:35:99:0,102,3635	0/0:22,0:22:66.23:0,66,2567	0/0:29,0:25:3.18:0,3,17	0/0:17,0:17:6.49:0,6,89	1/1:3,23:26:57.08:1097,57,0	1/1:6,19:21:18.06:589,18,0	1/1:19,0:11:12.02:152,12,0	0/0:30,0:30:80.42:0,80,2376	0/0:28,0:27:58.92:0,59,1437	0/0:29,0:29:75.21:0,75,2389	0/0:26,0:24:2.36:0,2,4	1/1:17,0:16:19.27:176,19,0	1/1:0,24:25:26.70:884,27,0	0/0:7,0:3:0.94:0,1,2
chr10	48217720	.	CTGTCTG	C	6484.66	PASS	AB=0.762;AC=26;AF=0.464;AN=56;BaseQRankSum=8.601;DP=687;FS=20.731;HRun=0;HaplotypeScore=149.4718;InbreedingCoeff=0.6675;MQ=55.93;MQ0=47;MQRankSum=-5.991;QD=18.96;ReadPosRankSum=1.320;VQSLOD=3.2990;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:90.18:0,90,2670	0/1:9,0:9:16.94:17,0,465	0/0:16,0:12:29.41:0,29,270	0/0:31,0:13:1.49:0,1,212	1/1:9,33:34:30.06:701,30,0	0/0:23,0:23:51.17:0,51,1182	0/0:26,0:25:72.20:0,72,1983	0/1:28,0:24:32.33:362,0,32	0/0:26,0:26:78.20:0,78,1758	1/1:3,26:26:60.07:1099,60,0	1/1:1,19:19:24.08:567,24,0	0/0:15,0:15:45.15:0,45,1152	0/0:21,0:21:60.17:0,60,1405	0/1:1,18:19:9.05:543,0,9	0/0:34,0:34:99:0,102,2643	0/0:22,0:22:66.22:0,66,1796	1/1:7,22:25:14.30:316,14,0	0/1:2,14:16:29.24:68,0,29	1/1:26,0:26:55.80:593,56,0	1/1:26,0:20:18.06:286,18,0	1/1:18,0:10:11.76:127,12,0	0/0:30,0:30:81.26:0,81,1922	0/0:30,0:29:60.20:0,60,1308	0/0:28,0:28:73.22:0,73,1932	1/1:2,25:25:15.05:367,15,0	1/1:2,18:19:51.10:858,51,0	1/1:26,0:25:27.06:432,27,0	1/1:4,3:3:6.02:147,6,0
chr10	48217726	.	GTC	G	1360.04	PASS	AB=0.923;AC=21;AF=0.375;AN=56;BaseQRankSum=13.445;DP=687;FS=29.734;HRun=0;HaplotypeScore=129.6021;InbreedingCoeff=0.5877;MQ=57.08;MQ0=47;MQRankSum=-9.708;QD=4.25;ReadPosRankSum=3.362;VQSLOD=1.4327;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,2:41:48.28:0,48,1278	0/0:8,0:8:5.01:0,5,304	0/0:16,0:12:27.53:0,28,352	0/0:33,0:16:27.55:0,28,356	1/1:41,0:35:21.16:80,21,0	0/0:27,0:27:57.19:0,57,774	0/0:25,0:24:63.20:0,63,963	1/1:27,0:23:14.38:247,14,0	0/0:22,0:22:45.15:0,45,701	0/1:30,0:27:9.62:104,0,10	1/1:20,0:19:21.27:107,21,0	0/0:18,0:18:43.60:0,44,361	0/0:17,0:17:49.82:0,50,453	0/1:19,0:19:22.53:51,0,23	0/0:32,0:32:72.24:0,72,1131	0/0:22,0:22:57.19:0,57,893	1/1:27,0:24:10.34:49,10,0	0/0:17,0:17:1.58:0,2,56	1/1:25,0:25:41.94:418,42,0	1/1:25,1:20:17.93:136,18,0	0/1:7,12:11:7.12:31,0,7	0/0:31,0:32:58.76:0,59,591	0/0:30,0:29:57.65:0,58,432	0/0:27,0:27:56.66:0,57,510	0/1:28,0:27:36.85:37,0,49	1/1:20,0:19:21.19:83,21,0	1/1:26,0:25:26.88:205,27,0	0/1:7,0:4:14.09:14,0,16
chr10	48218719	.	C	CGT	8185.65	PASS	AB=0.642;AC=22;AF=0.393;AN=56;BaseQRankSum=-12.980;DP=748;FS=1.122;HRun=0;HaplotypeScore=100.0889;InbreedingCoeff=0.4136;MQ=65.79;MQ0=3;MQRankSum=0.578;QD=22.18;ReadPosRankSum=1.830;VQSLOD=5.2250;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:52:99:0,102,1122	0/0:11,0:12:20.90:0,21,227	0/0:30,0:19:14.79:0,15,158	0/0:23,0:20:33.22:0,33,314	1/1:7,14:21:30.07:474,30,0	0/0:26,0:28:62.81:0,63,686	0/0:24,0:26:56.84:0,57,632	0/1:17,14:31:7.28:564,0,7	0/0:23,0:27:68.52:0,69,719	1/1:8,12:20:39.59:576,40,0	0/1:10,9:20:43.97:306,0,44	0/1:10,12:22:31.91:483,0,32	0/1:10,21:31:4.90:883,0,5	0/1:18,27:47:94.14:1007,0,94	0/0:28,0:28:66.02:0,66,748	0/0:28,0:29:59.99:0,60,667	0/1:11,20:32:79.31:745,0,79	1/1:7,16:24:40.02:620,40,0	0/0:18,0:20:23.72:0,24,238	0/0:8,0:9:17.89:0,18,192	0/0:64,0:67:95.94:0,96,1468	1/1:8,17:27:45.14:692,45,0	0/1:11,8:19:17.01:220,0,17	1/1:9,19:28:22.27:598,22,0	0/1:5,8:14:7.22:355,0,7	1/1:12,13:26:6.64:568,7,0	0/0:26,0:27:38.95:0,39,439	1/1:1,5:6:6.02:95,6,0
chr10	48218739	.	T	TGG	3468.43	PASS	AB=0.989;AC=16;AF=0.286;AN=56;BaseQRankSum=14.401;DP=721;FS=7.268;HRun=2;HaplotypeScore=103.3437;InbreedingCoeff=-0.2513;MQ=70.80;MQ0=2;MQRankSum=-0.969;QD=10.42;ReadPosRankSum=6.518;VQSLOD=0.5019;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,123,1581	0/0:8,0:8:23.09:0,23,293	0/0:36,0:25:43.09:0,43,664	0/0:29,0:25:66.13:0,66,777	0/1:22,0:21:99:186,0,119	0/0:28,0:28:84.11:0,84,1011	0/0:31,0:31:90.10:0,90,1065	0/1:27,0:27:99:170,0,267	0/0:31,0:31:87.13:0,87,1058	0/1:20,1:21:97.44:231,0,97	0/1:17,0:17:99:116,0,167	0/1:22,0:22:99:195,0,177	0/1:28,1:29:65.73:422,0,66	0/1:40,1:41:99:484,0,202	0/0:33,0:32:89.91:0,90,1111	0/0:28,0:28:84.16:0,84,1055	0/1:34,0:34:99:330,0,283	0/1:22,0:22:39.94:261,0,40	0/0:23,0:23:65.14:0,65,650	0/0:12,0:12:33.03:0,33,368	0/0:68,0:68:99:0,170,2252	0/1:22,0:22:21.59:273,0,22	0/1:14,0:14:88.93:89,0,91	0/1:26,0:26:99:266,0,104	0/1:13,0:13:38.95:157,0,39	0/1:18,1:19:99:240,0,114	0/0:16,0:16:48.09:0,48,620	1/1:4,0:4:6:50,6,0
chr10	48219046	.	T	TCC	3469.01	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-6.281;DP=532;FS=4.030;HRun=8;HaplotypeScore=89.0382;InbreedingCoeff=0.9058;MQ=77.44;MQ0=3;MQRankSum=2.067;QD=17.88;ReadPosRankSum=-3.314;VQSLOD=1.5625;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:81.18:0,81,902	0/0:12,0:12:24.05:0,24,265	0/0:24,1:20:22.24:0,22,211	0/0:31,0:21:7.81:0,8,99	1/1:2,12:16:21.07:322,21,0	0/0:19,0:19:48.12:0,48,535	0/0:20,0:20:48.12:0,48,533	1/1:10,1:25:34.80:156,35,0	0/0:28,0:28:72.15:0,72,792	1/1:2,12:15:33.02:495,33,0	1/1:2,7:9:9.03:143,9,0	0/0:33,0:33:84.50:0,84,944	0/0:26,0:27:32.19:0,32,577	1/1:6,15:20:30.10:470,30,0	0/0:28,0:28:81.21:0,81,897	0/0:20,0:20:34.86:0,35,608	1/1:1,18:22:34.88:493,35,0	1/1:2,9:10:15.05:238,15,0	1/1:6,0:6:6.01:71,6,0	1/1:5,0:5:3:25,3,0	1/1:3,1:10:6.01:59,6,0	0/0:21,0:21:45.05:0,45,486	0/0:15,0:15:33.04:0,33,346	0/0:19,0:19:48.08:0,48,522	1/1:1,9:10:17.77:264,18,0	1/1:4,15:21:33.07:497,33,0	1/1:6,1:17:11.84:140,12,0	1/1:0,6:6:6.02:95,6,0
chr10	48220896	.	TTC	T	1539.96	PASS	AB=0.736;AC=23;AF=0.460;AN=50;BaseQRankSum=0.092;DP=152;FS=6.010;HRun=0;HaplotypeScore=31.3440;InbreedingCoeff=0.4742;MQ=73.23;MQ0=1;MQRankSum=-0.469;QD=23.69;ReadPosRankSum=0.045;VQSLOD=3.2292;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:9:23.90:0,24,277	0/0:1,0:1:3.01:0,3,57	0/0:4,0:4:0.04:0,0,136	0/0:4,0:4:12.04:0,12,203	./.	0/0:9,0:8:18.15:0,18,280	0/0:7,0:6:14.79:0,15,164	0/0:33,0:31:80.12:0,80,1287	0/0:7,0:7:18.06:0,18,284	1/1:1,0:1:3.01:47,3,0	./.	1/1:5,0:5:14.94:196,15,0	1/1:7,1:8:21.05:277,21,0	1/1:3,0:3:9.01:112,9,0	0/0:7,0:6:18.03:0,18,252	0/0:3,0:3:6.02:0,6,100	0/1:6,1:7:2.74:212,0,3	0/1:2,8:10:23.43:129,0,23	0/1:4,0:4:5.91:95,0,6	1/1:1,0:1:3.01:45,3,0	1/1:3,0:3:9.03:132,9,0	./.	1/1:2,0:2:6.02:90,6,0	1/1:1,0:1:3.01:45,3,0	0/0:1,1:2:1.25:0,1,3	1/1:1,5:6:15.04:203,15,0	0/1:0,8:8:0:0,0,0	0/1:4,2:6:5.80:120,0,6
chr10	48220898	.	CAT	C	260.11	PASS	AB=0.875;AC=12;AF=0.429;AN=28;BaseQRankSum=0.032;DP=147;FS=0.000;HRun=0;HaplotypeScore=35.8035;InbreedingCoeff=0.2195;MQ=72.57;MQ0=2;MQRankSum=-0.064;QD=3.17;ReadPosRankSum=1.380;VQSLOD=1.2056;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:7,2:8:3.01:34,3,0	0/0:1,0:1:3.01:0,3,44	./.	./.	./.	0/1:6,3:8:17.18:95,0,17	1/1:3,3:5:3.01:34,3,0	1/1:32,0:30:3.67:121,4,0	1/1:6,0:7:2.84:14,3,0	./.	./.	0/0:5,0:5:2.84:0,3,14	0/1:6,0:6:7.14:7,0,11	./.	./.	./.	0/0:9,0:9:5.81:0,6,50	1/1:13,0:12:12.90:58,13,0	0/0:2,0:2:2.94:0,3,18	./.	./.	./.	./.	./.	./.	0/0:6,0:6:3.01:0,3,44	0/0:8,0:8:0:0,0,0	0/0:8,0:8:0.59:0,1,123
chr10	48220918	.	TATATATATATATAC	T	907.47	PASS	AB=1.000;AC=7;AF=0.194;AN=36;BaseQRankSum=-1.575;DP=126;FS=4.170;HRun=0;HaplotypeScore=64.7353;InbreedingCoeff=0.1446;MQ=56.12;MQ0=4;MQRankSum=1.455;QD=14.18;ReadPosRankSum=-3.481;VQSLOD=0.6473;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:9:14.95:0,15,194	0/0:1,0:1:3.01:0,3,178	./.	./.	0/1:2,0:2:12.12:19,0,12	0/0:10,0:9:21.41:0,21,750	0/0:4,0:3:6.02:0,6,124	1/1:9,26:31:80.30:891,80,0	0/0:3,0:3:6:0,6,134	0/0:2,0:1:3.01:0,3,117	./.	0/0:4,0:4:10.82:0,11,215	0/0:4,0:4:5.38:0,5,171	./.	0/0:2,0:1:2.99:0,3,24	./.	0/1:10,0:10:26.33:26,0,532	0/1:14,0:13:60.53:61,0,243	0/0:2,0:2:5.98:0,6,140	./.	./.	./.	0/0:2,0:2:5.99:0,6,48	./.	./.	0/0:1,0:1:3.01:0,3,170	1/1:3,0:3:2.99:24,3,0	0/0:10,0:10:6.14:0,6,957
chr10	48220924	.	T	TAC	237.82	PASS	AB=1.000;AC=7;AF=0.175;AN=40;BaseQRankSum=2.142;DP=145;FS=5.695;HRun=0;HaplotypeScore=39.6995;InbreedingCoeff=0.4385;MQ=56.04;MQ0=4;MQRankSum=-0.036;QD=5.28;ReadPosRankSum=-0.381;VQSLOD=1.5936;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:11:17.90:0,18,137	0/0:1,0:1:2.98:0,3,21	./.	./.	0/0:4,0:4:11.97:0,12,96	0/0:11,0:10:20.63:0,21,166	0/0:4,0:3:5.87:0,6,40	0/1:32,0:28:99:141,0,136	0/0:4,0:4:8.97:0,9,71	0/0:3,0:2:6.01:0,6,55	0/0:2,0:2:3:0,3,25	1/1:4,0:4:11.98:99,12,0	1/1:1,5:7:5.93:69,6,0	./.	0/0:2,0:1:3:0,3,25	./.	0/0:12,0:12:22.68:0,23,190	0/0:14,0:13:27.55:0,28,276	0/0:2,0:2:5.97:0,6,62	./.	./.	./.	1/1:2,0:2:5.99:48,6,0	./.	0/0:4,0:4:6:0,6,51	0/0:3,0:3:9.01:0,9,96	0/0:3,0:3:2.98:0,3,22	0/0:10,0:10:29.99:0,30,320
chr10	48221641	.	CA	C	803.94	PASS	AB=0.885;AC=20;AF=0.357;AN=56;BaseQRankSum=1.510;DP=606;FS=4.168;HRun=17;HaplotypeScore=92.3607;InbreedingCoeff=0.1134;MQ=72.86;MQ0=3;MQRankSum=-0.199;QD=2.22;ReadPosRankSum=4.957;VQSLOD=-0.3666;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:18,5:27:29.43:29,0,150	0/1:5,0:5:4.74:5,0,56	0/1:28,0:11:3.66:4,0,34	0/1:30,0:24:6.24:48,0,6	0/0:21,0:22:38.67:0,39,228	0/1:23,2:26:0.83:1,0,160	0/0:16,2:18:13.01:0,13,183	0/0:23,0:37:50.06:0,50,275	0/0:15,0:16:17.07:0,17,200	0/0:13,2:18:0.05:0,0,104	0/0:15,0:26:39.42:0,39,234	0/1:15,2:17:27.59:28,0,57	1/1:8,5:13:19.61:105,20,0	0/0:16,0:17:38.20:0,38,208	0/1:26,2:27:32.03:32,0,217	0/1:22,3:26:6.90:7,0,205	0/0:11,0:24:8.83:0,9,62	0/0:12,0:14:28.17:0,28,160	0/1:16,8:23:43.42:104,0,43	1/1:9,9:21:26.11:134,26,0	0/1:16,3:20:13.43:30,0,13	1/1:6,9:16:22.11:119,22,0	1/1:7,11:19:19.03:105,19,0	0/1:13,1:16:23.62:55,0,24	0/0:13,0:16:31.99:0,32,190	0/0:17,0:22:20.71:0,21,143	0/1:29,15:45:35.49:174,0,35	0/0:7,0:9:14.63:0,15,96
chr10	48223991	.	AGAG	A	285.32	PASS	AB=0.835;AC=4;AF=0.074;AN=54;BaseQRankSum=5.070;DP=876;FS=7.976;HRun=0;HaplotypeScore=88.4640;InbreedingCoeff=-0.0629;MQ=42.74;MQ0=246;MQRankSum=-3.843;QD=5.10;ReadPosRankSum=-2.311;VQSLOD=1.0800;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:29:84.27:0,84,1914	0/0:8,0:5:15.05:0,15,370	./.	0/0:101,0:1:3:0,3,28	0/0:26,0:21:60.19:0,60,1361	0/0:26,0:20:53.97:0,54,1250	0/0:34,0:29:70.47:0,70,1542	0/0:38,0:8:21.05:0,21,440	0/0:27,0:22:63.21:0,63,1485	0/0:40,0:23:69.23:0,69,1568	0/0:13,0:7:21.07:0,21,514	0/0:31,0:29:81.25:0,81,1759	0/0:25,0:21:62.70:0,63,1443	0/0:33,0:28:81.28:0,81,1933	0/0:32,0:28:82.83:0,83,1947	0/0:33,0:32:96.33:0,96,2305	0/0:44,0:43:99:0,113,2881	0/0:26,0:24:72.24:0,72,1554	0/1:20,1:4:34.57:49,0,35	0/1:6,1:4:29.72:145,0,30	0/1:16,1:7:13.13:19,0,13	0/0:19,0:8:24.08:0,24,579	0/0:12,0:9:25.31:0,25,544	0/0:54,0:53:99:0,137,3103	0/0:19,0:9:24.02:0,24,488	0/0:31,0:24:67.41:0,67,1325	0/1:5,4:9:22.28:180,0,22	0/0:12,0:10:30.10:0,30,739
chr10	48223994	.	G	GAC	92.57	PASS	AB=0.906;AC=6;AF=0.115;AN=52;BaseQRankSum=5.171;DP=888;FS=6.297;HRun=0;HaplotypeScore=86.1190;InbreedingCoeff=0.4657;MQ=42.05;MQ0=265;MQRankSum=-2.597;QD=1.54;ReadPosRankSum=-2.448;VQSLOD=0.8061;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:27:78.23:0,78,1147	0/0:9,0:5:15.05:0,15,229	./.	./.	0/0:25,0:19:54.17:0,54,802	0/0:27,0:20:51.61:0,52,727	0/0:34,0:29:70.41:0,70,949	0/0:44,0:8:20.42:0,20,264	0/0:28,0:23:60.17:0,60,872	0/0:39,0:21:63.20:0,63,926	0/0:14,0:7:21.06:0,21,300	0/0:28,0:26:72.17:0,72,982	0/0:24,0:20:60.11:0,60,848	0/0:35,0:29:81.23:0,81,1172	0/0:32,0:28:81.69:0,82,1172	0/0:33,0:32:96.26:0,96,1378	0/0:44,0:43:99:0,122,1719	0/0:25,1:24:6.60:0,7,805	0/1:20,1:4:7.86:52,0,8	0/1:10,0:7:8.03:62,0,8	1/1:13,5:7:0.42:1,0,0	0/0:19,0:8:24.02:0,24,282	0/0:11,0:8:22.32:0,22,324	0/0:51,0:50:99:0,132,1869	0/0:20,0:8:14.51:0,15,249	0/0:35,0:25:70.80:0,71,866	1/1:8,1:9:4.92:82,5,0	0/0:12,0:10:30.10:0,30,450
chr10	48225089	.	T	TAA	4534.62	PASS	AB=0.808;AC=26;AF=0.481;AN=54;BaseQRankSum=-1.249;DP=422;FS=5.436;HRun=11;HaplotypeScore=56.8019;InbreedingCoeff=0.8308;MQ=61.19;MQ0=11;MQRankSum=1.352;QD=21.59;ReadPosRankSum=0.448;VQSLOD=3.9314;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:18:29.92:0,30,284	0/0:8,0:8:18.02:0,18,175	0/1:23,0:12:0.26:0,0,110	0/0:21,0:9:4.25:0,4,73	1/1:4,13:21:41.24:455,41,0	0/0:13,0:13:33.05:0,33,320	0/0:14,0:14:33.04:0,33,320	0/0:27,0:21:24.78:0,25,448	0/0:5,0:5:15.02:0,15,145	1/1:3,11:14:33.11:476,33,0	1/1:0,10:10:24.08:347,24,0	1/1:2,0:10:17.47:60,17,0	1/1:3,0:7:4.99:17,5,0	1/1:3,6:10:17.55:224,18,0	0/0:14,0:15:41.80:0,42,390	0/0:13,0:13:26.99:0,27,255	1/1:5,27:35:65.71:921,66,0	1/1:3,22:25:57.19:824,57,0	0/0:22,0:20:44.92:0,45,414	0/0:27,0:27:78.11:0,78,750	0/0:8,0:10:17.62:0,18,207	1/1:0,0:3:7.49:26,7,0	0/1:3,0:8:15.46:15,0,18	1/1:2,0:6:14.97:51,15,0	1/1:1,11:14:41.07:515,41,0	1/1:2,19:21:45.07:602,45,0	0/0:13,0:13:36.02:0,36,336	./.
chr10	48225211	.	CA	C	72.70	PASS	AB=0.824;AC=5;AF=0.089;AN=56;BaseQRankSum=-1.450;DP=507;FS=6.194;HRun=11;HaplotypeScore=84.7219;InbreedingCoeff=0.2347;MQ=72.59;MQ0=10;MQRankSum=-1.219;QD=2.42;ReadPosRankSum=-2.347;VQSLOD=-0.6818;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:33:59.97:0,60,613	0/1:2,2:4:37.25:37,0,52	0/0:43,0:18:10.64:0,11,178	0/0:32,1:14:9.96:0,10,76	0/0:27,0:27:1.77:0,2,201	0/1:7,1:7:3.60:4,0,165	0/0:12,0:12:33.03:0,33,337	0/0:25,1:22:32.44:0,32,528	0/0:9,0:8:15.04:0,15,160	0/0:22,1:23:10.46:0,10,213	0/0:16,0:16:12.28:0,12,114	0/0:10,0:10:6.99:0,7,180	1/1:0,7:7:14.98:123,15,0	0/1:10,1:11:21.94:22,0,80	0/0:12,0:12:33.08:0,33,346	0/0:10,0:12:26.89:0,27,261	0/0:37,1:38:2.60:0,3,299	0/0:24,0:24:35.60:0,36,239	0/0:20,1:20:23.28:0,23,399	0/0:10,0:10:14.99:0,15,147	0/0:19,0:18:44.81:0,45,446	0/0:7,0:7:17.84:0,18,163	0/0:8,0:8:21.04:0,21,218	0/0:33,0:33:56.17:0,56,735	0/0:17,1:18:13.42:0,13,152	0/0:21,1:22:35.47:0,35,295	0/0:10,0:10:17.95:0,18,160	0/0:8,0:7:12.50:0,13,62
chr10	48225230	.	G	GGT	1007.07	PASS	AB=0.814;AC=7;AF=0.125;AN=56;BaseQRankSum=-1.530;DP=514;FS=1.463;HRun=0;HaplotypeScore=105.4628;InbreedingCoeff=0.3947;MQ=69.19;MQ0=11;MQRankSum=1.380;QD=14.18;ReadPosRankSum=-1.202;VQSLOD=3.5298;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:60.15:0,60,686	0/0:4,0:4:6.02:0,6,71	0/0:53,0:22:23.55:0,24,255	0/0:53,0:24:13.77:0,14,172	0/0:18,0:18:36.10:0,36,414	0/0:6,0:8:20.73:0,21,203	0/0:16,0:16:12.15:0,12,317	0/0:18,0:19:20.89:0,21,226	0/0:6,0:5:12.04:0,12,140	0/0:25,0:25:54.14:0,54,620	0/0:16,0:16:33.10:0,33,391	0/1:11,1:12:17.44:17,0,290	0/0:7,0:7:12.04:0,12,142	0/0:14,0:14:24.07:0,24,282	0/0:11,0:12:23.90:0,24,262	0/0:11,0:11:15:0,15,161	0/0:34,0:34:53.14:0,53,902	0/0:24,0:24:36.19:0,36,638	0/1:14,3:18:17.97:176,0,18	1/1:0,7:7:18.06:285,18,0	0/1:16,12:28:99:549,0,123	0/0:8,0:8:12.04:0,12,142	0/0:6,0:7:8.86:0,9,85	0/0:23,0:26:7.52:0,8,565	0/0:17,0:17:45.14:0,45,533	0/0:25,0:25:57.16:0,57,665	1/1:2,3:6:8.99:115,9,0	0/0:2,0:2:6.02:0,6,71
chr10	48225425	.	TCACACACACACACACACA	T	4604.50	PASS	AB=0.857;AC=17;AF=0.304;AN=56;BaseQRankSum=8.728;DP=559;FS=46.610;HRun=0;HaplotypeScore=240.3708;InbreedingCoeff=0.6999;MQ=73.38;MQ0=11;MQRankSum=-4.555;QD=32.43;ReadPosRankSum=-1.067;VQSLOD=2.4166;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:51.18:0,51,3510	0/0:9,0:8:12.04:0,12,784	0/0:34,0:22:5.35:0,5,122	0/0:42,0:32:12.04:0,12,309	1/1:11,6:17:15.05:534,15,0	0/0:10,0:10:12.04:0,12,776	0/0:23,0:27:26.51:0,27,1730	0/0:18,0:18:18.06:0,18,1249	0/0:20,0:22:48.16:0,48,3474	1/1:14,8:23:24.05:807,24,0	1/1:11,1:13:3.01:106,3,0	0/0:22,0:22:6.02:0,6,459	0/0:9,0:9:0:0,0,0	1/1:10,12:25:33.11:1542,33,0	0/0:17,0:20:9.03:0,9,509	0/0:24,0:26:48.14:0,48,3214	1/1:19,0:22:2.59:125,3,0	0/1:10,2:10:99:140,0,156	0/0:18,0:21:30.10:0,30,963	0/0:14,0:12:9.03:0,9,332	0/0:28,0:32:41.71:0,42,1444	0/0:11,0:11:6.02:0,6,343	0/0:11,0:11:18.06:0,18,1238	0/0:32,0:36:7.33:0,7,524	1/1:3,6:9:12.04:549,12,0	1/1:9,7:18:24.05:782,24,0	0/0:15,0:20:33.11:0,33,1132	1/1:3,0:3:2.97:20,3,0
chr10	48225751	.	T	TC	1528.38	PASS	AB=0.754;AC=11;AF=0.196;AN=56;BaseQRankSum=9.884;DP=798;FS=81.710;HRun=0;HaplotypeScore=151.4060;InbreedingCoeff=-0.2503;MQ=70.51;MQ0=19;MQRankSum=-6.752;QD=5.56;ReadPosRankSum=-5.302;VQSLOD=-0.1073;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:35:99:0,99,1262	0/0:11,0:11:33.11:0,33,450	0/0:61,0:31:86.19:0,86,1000	0/0:73,0:34:81.33:0,81,941	0/0:21,6:27:44.91:0,45,578	0/0:25,0:26:72.09:0,72,893	0/0:33,0:34:99:0,102,1347	0/0:45,4:45:63.50:0,64,1362	0/0:14,0:18:45.07:0,45,564	0/1:25,6:30:99:239,0,711	0/1:15,5:20:44.25:44,0,271	0/1:11,15:25:82.40:82,0,242	0/1:13,14:26:99:265,0,307	0/0:17,12:29:11.47:0,11,385	0/0:29,0:29:84.21:0,84,1123	0/0:29,0:32:92.45:0,92,1235	0/1:13,6:18:44.32:44,0,270	0/1:8,4:12:99:148,0,248	0/1:23,3:24:99:185,0,559	0/0:16,7:19:41.94:0,42,480	0/0:15,6:20:5.81:0,6,367	0/0:13,6:19:26.73:0,27,278	0/0:14,10:23:32.38:0,32,304	0/1:24,8:32:16.98:17,0,411	0/1:16,5:20:11.58:12,0,348	0/1:21,18:35:99:511,0,674	0/1:11,11:20:99:129,0,339	0/0:7,3:9:17.40:0,17,208
chr10	48226494	.	C	CTG	350.46	PASS	AB=1.000;AC=12;AF=0.333;AN=36;BaseQRankSum=-2.668;DP=501;FS=1.560;HRun=0;HaplotypeScore=88.5406;InbreedingCoeff=0.1684;MQ=62.29;MQ0=17;MQRankSum=2.424;QD=2.19;ReadPosRankSum=2.469;VQSLOD=1.6852;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:27:8.37:0,8,61	./.	./.	./.	0/0:18,0:18:0:0,0,2	./.	0/0:21,0:22:6.32:0,6,46	./.	0/1:20,0:20:34.81:105,0,35	0/0:19,0:19:8.11:0,8,41	1/1:15,0:15:0.79:2,1,0	0/1:22,0:21:47.65:73,0,48	1/1:9,4:14:6.02:84,6,0	./.	0/0:11,0:11:2.92:0,3,17	0/1:18,0:18:7.57:8,0,30	0/0:22,0:20:5.68:0,6,28	0/0:5,0:5:2.84:0,3,14	./.	./.	0/1:37,0:36:15.87:16,0,32	0/0:10,0:10:3:0,3,29	1/1:13,0:13:2.99:24,3,0	1/1:20,0:18:14.93:158,15,0	./.	0/0:21,0:21:8.07:0,8,41	0/0:19,0:19:11.88:0,12,94	./.
chr10	48226534	.	GTGTGTGTGTGTA	G	1144.04	PASS	AB=0.964;AC=17;AF=0.327;AN=52;BaseQRankSum=5.219;DP=431;FS=7.344;HRun=0;HaplotypeScore=141.1361;InbreedingCoeff=0.3688;MQ=39.27;MQ0=59;MQRankSum=-5.249;QD=7.20;ReadPosRankSum=-1.759;VQSLOD=1.9251;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:26:27.10:0,27,662	0/0:5,0:5:5.54:0,6,143	./.	./.	1/1:14,1:14:3.19:7,3,0	0/0:12,0:11:14.97:0,15,189	0/0:24,0:23:14.85:0,15,630	0/0:13,0:11:6.63:0,7,142	0/1:13,0:12:0.05:0,0,822	1/1:19,2:19:13.80:426,14,0	1/1:15,1:12:3.17:108,3,0	0/0:15,0:15:25.98:0,26,718	0/0:13,0:12:4.36:0,4,406	0/1:15,0:14:28.92:61,0,29	0/0:13,0:11:14.94:0,15,224	0/0:21,0:19:25.07:0,25,412	0/1:17,1:14:8.13:190,0,8	1/1:3,0:2:5.97:126,6,0	0/0:9,0:8:7.66:0,8,237	0/0:14,0:14:5.74:0,6,41	0/0:26,0:19:12.19:0,12,529	0/0:10,0:8:6.91:0,7,222	0/0:13,0:13:8.98:0,9,198	0/1:28,0:23:10.17:10,0,952	1/1:10,2:10:2.87:20,3,0	0/1:12,2:14:84.85:301,0,85	0/0:20,0:19:11.79:0,12,887	1/1:4,0:4:8.74:51,9,0
chr10	48226536	.	GTGTGTGTGTA	G	1099.26	PASS	AB=0.985;AC=20;AF=0.385;AN=52;BaseQRankSum=5.131;DP=416;FS=18.249;HRun=0;HaplotypeScore=129.1991;InbreedingCoeff=0.3565;MQ=38.73;MQ0=60;MQRankSum=-5.682;QD=5.88;ReadPosRankSum=-1.153;VQSLOD=1.0221;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:26:23.58:0,24,497	0/0:5,0:5:5.54:0,6,113	./.	./.	1/1:4,8:12:3.19:6,3,0	0/0:11,0:10:8.78:0,9,56	0/1:24,0:23:2.47:2,0,485	0/0:11,0:9:6.63:0,7,142	0/1:13,0:12:0.05:0,0,674	1/1:18,1:17:43.01:472,43,0	1/1:16,0:12:2.91:78,3,0	0/0:16,0:16:25.22:0,25,563	0/0:13,0:12:1.35:0,1,299	1/1:14,0:14:2.49:33,2,0	0/0:14,0:12:14.92:0,15,158	0/0:21,0:19:1.65:0,2,214	1/1:16,1:13:9.25:209,9,0	1/1:3,0:2:5.97:115,6,0	0/0:9,0:8:7.63:0,8,181	0/0:15,0:15:4.95:0,5,18	0/0:25,0:18:9.33:0,9,395	0/0:10,0:8:6.91:0,7,171	0/1:14,0:14:8.92:9,0,139	0/1:28,0:23:13.18:13,0,740	0/1:11,0:9:0.10:0,0,0	0/1:9,0:10:46.30:264,0,46	0/0:18,0:17:11.79:0,12,739	1/1:4,0:4:8.74:51,9,0
chr10	48226544	.	GTA	G	717.43	PASS	AB=0.993;AC=25;AF=0.481;AN=52;BaseQRankSum=3.456;DP=388;FS=0.000;HRun=0;HaplotypeScore=97.6453;InbreedingCoeff=-0.1066;MQ=36.54;MQ0=62;MQRankSum=-2.543;QD=2.46;ReadPosRankSum=-0.421;VQSLOD=1.9585;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:23:32.05:32,0,38	0/0:4,0:4:5.72:0,6,33	./.	./.	0/1:12,0:11:0.07:0,0,0	0/0:5,4:8:2.74:0,3,17	0/1:16,0:15:22.49:22,0,29	0/0:15,0:12:15.52:0,16,200	0/1:13,0:12:5.66:6,0,89	1/1:17,0:15:42.95:277,43,0	0/1:14,0:10:0.36:0,0,0	0/1:18,0:18:41.72:42,0,70	0/1:10,0:9:2.48:2,0,64	1/1:11,0:10:2.78:18,3,0	0/1:13,0:11:27.64:28,0,52	0/1:16,0:16:28.91:48,0,29	1/1:14,0:10:13.92:91,14,0	1/1:4,0:3:5.54:42,6,0	0/0:9,0:8:7.61:0,8,105	0/0:16,0:16:4.48:0,4,17	0/1:25,0:19:30.03:30,0,43	0/0:7,1:6:3.05:0,3,10	0/1:12,0:12:10.02:36,0,10	0/1:26,0:21:21.10:21,0,86	0/1:10,0:9:0:0,0,0	0/1:9,0:9:46.36:75,0,46	0/1:21,0:18:41.90:42,0,145	1/1:4,0:4:8.74:51,9,0
chr10	48226550	.	G	GGAGA	350.04	PASS	AB=0.959;AC=17;AF=0.340;AN=50;BaseQRankSum=-2.545;DP=399;FS=2.084;HRun=0;HaplotypeScore=116.8729;InbreedingCoeff=0.1795;MQ=35.57;MQ0=63;MQRankSum=1.373;QD=1.89;ReadPosRankSum=-2.767;VQSLOD=1.8918;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:23:5.53:46,0,6	0/1:5,0:5:14.29:14,0,22	./.	./.	0/0:12,0:11:0:0,0,0	1/1:9,0:8:3.22:13,3,0	0/0:17,0:16:8.61:0,9,84	0/1:20,0:16:4.29:7,0,4	0/0:13,0:12:2.92:0,3,42	0/0:17,0:15:21.02:0,21,195	0/1:14,0:10:0:1,0,0	1/1:8,6:16:8.77:152,9,0	0/1:10,0:9:30.88:36,0,31	0/1:8,0:10:0:1,0,0	0/0:8,0:12:6.02:0,6,92	0/1:8,5:14:40.11:64,0,40	1/1:13,0:11:0.47:1,0,0	0/1:4,0:3:0:0,0,0	0/0:12,0:11:6.01:0,6,56	0/0:13,0:13:5.94:0,6,56	0/0:20,0:17:6.26:0,6,56	1/1:13,0:11:6.01:87,6,0	0/0:11,0:11:2.99:0,3,24	0/1:27,0:23:13.96:57,0,14	./.	0/0:12,0:11:5.55:0,6,55	0/0:21,0:20:16.87:0,17,147	0/0:4,0:4:9.01:0,9,83
chr10	48226582	.	AGAGAGAGAGAGAGAG	A	1171.89	PASS	AB=0.814;AC=4;AF=0.071;AN=56;BaseQRankSum=6.300;DP=567;FS=19.593;HRun=0;HaplotypeScore=167.8596;InbreedingCoeff=0.1234;MQ=49.01;MQ0=45;MQRankSum=-4.852;QD=26.04;ReadPosRankSum=2.791;VQSLOD=1.7343;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:33:54.61:0,55,1934	0/0:8,0:8:15.94:0,16,615	0/0:53,0:10:26.76:0,27,318	0/0:90,0:17:28.64:0,29,346	0/1:13,0:13:0.01:0,0,72	0/0:11,0:10:10.85:0,11,298	0/0:13,0:13:20.28:0,20,995	0/0:33,0:31:88.83:0,89,1864	0/0:13,0:13:27.09:0,27,669	0/1:8,3:11:5.55:706,0,6	0/0:8,2:10:6.30:0,6,57	0/0:21,0:21:36.12:0,36,1292	0/0:11,0:10:21.54:0,22,834	0/0:9,2:11:19.92:0,20,129	0/0:18,0:18:21.07:0,21,735	0/0:19,0:19:39.10:0,39,1428	0/0:12,2:11:9.44:0,9,148	0/0:5,0:5:14.78:0,15,104	0/0:15,0:15:44.74:0,45,1188	0/0:16,0:16:26.37:0,26,756	0/0:30,0:27:45.35:0,45,1284	0/0:19,0:18:30.10:0,30,805	0/0:12,0:12:15.05:0,15,397	0/0:29,0:25:36.12:0,36,948	0/0:7,3:9:20.58:0,21,119	0/1:9,2:10:99:186,0,417	0/0:25,0:19:39.60:0,40,1387	0/1:5,3:7:5.76:379,0,6
chr10	48228110	.	TC	T	4172.72	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=14.305;DP=424;FS=2.982;HRun=3;HaplotypeScore=53.6880;InbreedingCoeff=0.9596;MQ=68.02;MQ0=2;MQRankSum=-0.763;QD=33.65;ReadPosRankSum=1.433;VQSLOD=4.1308;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:87.23:0,87,1189	0/0:3,0:3:9.03:0,9,130	0/0:19,0:19:51.16:0,51,709	0/0:24,0:21:51.51:0,52,707	1/1:0,15:15:42.06:521,42,0	0/0:15,0:15:42.14:0,42,605	0/0:13,0:13:39.13:0,39,562	0/0:32,0:32:90.28:0,90,1247	0/0:14,0:14:42.14:0,42,604	1/1:0,13:13:39.08:457,39,0	1/1:1,21:22:63.20:780,63,0	0/0:11,0:11:33.11:0,33,475	0/0:11,0:11:33.11:0,33,475	1/1:0,7:7:15.05:186,15,0	0/0:13,0:13:39.13:0,39,562	0/0:15,0:15:45.13:0,45,613	1/1:0,25:25:66.21:818,66,0	1/1:0,8:8:21.07:259,21,0	0/0:17,0:17:45.13:0,45,610	0/0:8,0:8:24.07:0,24,327	0/0:12,0:12:36.12:0,36,517	0/0:10,0:10:30.10:0,30,432	0/0:16,0:16:45.15:0,45,647	0/0:18,0:18:54.18:0,54,777	1/1:0,12:12:33.10:409,33,0	1/1:2,19:21:57.18:706,57,0	0/0:20,0:20:60.15:0,60,806	1/1:0,1:1:3.01:37,3,0
chr10	48229885	.	ATATG	A	1100.01	PASS	AB=1.000;AC=10;AF=0.179;AN=56;BaseQRankSum=3.826;DP=374;FS=1.213;HRun=0;HaplotypeScore=88.4276;InbreedingCoeff=0.6581;MQ=75.51;MQ0=6;MQRankSum=-5.479;QD=10.78;ReadPosRankSum=-1.220;VQSLOD=2.7771;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:24:62.27:0,62,805	0/0:11,0:11:30.01:0,30,527	0/0:31,0:22:46.13:0,46,540	0/0:24,0:16:22.27:0,22,243	0/0:11,0:11:8.96:0,9,69	0/0:18,0:18:27.04:0,27,442	0/0:11,0:11:24.02:0,24,350	0/1:39,0:39:80.17:80,0,601	0/0:11,0:11:21.03:0,21,349	0/1:7,0:7:2.95:3,0,149	0/0:13,0:13:17.95:0,18,143	0/0:4,0:4:10.56:0,11,91	0/0:10,0:10:18.02:0,18,275	0/0:8,0:8:9:0,9,130	0/0:13,0:12:32.98:0,33,401	0/0:19,0:19:54:0,54,905	0/0:14,0:14:26.65:0,27,258	0/0:8,0:8:17.90:0,18,206	1/1:10,7:17:50.94:587,51,0	1/1:16,2:18:20.93:184,21,0	1/1:6,0:6:8.98:72,9,0	0/0:7,0:6:9:0,9,79	0/0:6,0:6:4.15:0,4,89	0/0:5,0:5:6:0,6,71	0/0:13,0:13:24.01:0,24,344	0/0:8,0:7:20.98:0,21,277	1/1:9,5:15:32.79:334,33,0	0/0:2,0:2:5.99:0,6,48
chr10	48229887	.	A	ATG	718.77	PASS	AB=0.833;AC=22;AF=0.478;AN=46;BaseQRankSum=0.886;DP=396;FS=0.000;HRun=0;HaplotypeScore=97.6657;InbreedingCoeff=0.4553;MQ=66.64;MQ0=7;MQRankSum=-2.201;QD=4.76;ReadPosRankSum=-1.760;VQSLOD=2.5691;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:24:20.99:0,21,199	0/0:11,0:11:15:0,15,147	./.	./.	./.	0/1:5,13:18:17.89:165,0,18	1/1:6,7:13:12.03:163,12,0	0/0:36,0:38:14:0,14,124	0/1:8,4:12:23.79:79,0,24	1/1:11,0:10:8.97:72,9,0	1/1:10,0:13:2.04:6,2,0	0/1:5,0:5:4.42:4,0,9	0/1:11,0:11:3.15:3,0,40	1/1:8,0:8:2.99:24,3,0	0/0:13,0:13:14.83:0,15,120	0/0:17,0:20:32.55:0,33,287	1/1:15,0:15:2.98:22,3,0	1/1:11,0:12:12.59:81,13,0	0/0:17,0:17:20.22:0,20,110	0/0:16,0:16:2.92:0,3,17	./.	0/0:7,0:6:2.90:0,3,16	0/0:5,0:6:2.84:0,3,14	./.	1/1:13,0:16:8.99:75,9,0	1/1:10,0:11:17.92:147,18,0	0/0:15,0:15:11.61:0,12,65	1/1:4,0:4:2.85:35,3,0
chr10	48229920	.	T	TACATATATATATAC	1045.75	PASS	AB=0.916;AC=14;AF=0.259;AN=54;BaseQRankSum=7.126;DP=294;FS=8.836;HRun=0;HaplotypeScore=129.8650;InbreedingCoeff=0.1054;MQ=46.81;MQ0=11;MQRankSum=-5.440;QD=9.68;ReadPosRankSum=-0.125;VQSLOD=1.8591;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:11.36:0,11,1295	0/0:8,0:8:24.07:0,24,884	0/0:15,0:9:27.09:0,27,928	0/0:12,0:7:18.06:0,18,767	0/0:13,0:12:0:0,0,0	0/0:19,0:19:30.10:0,30,1259	0/0:17,0:16:33.11:0,33,1217	0/1:25,0:25:99:443,0,337	0/0:11,0:11:21.07:0,21,771	0/1:7,2:8:99:191,0,400	0/1:6,0:7:0:0,0,0	0/1:3,0:5:8.74:9,0,142	0/0:8,0:9:12.03:0,12,288	0/0:4,1:5:2.73:0,3,95	0/0:18,0:17:45.14:0,45,1615	0/0:19,0:19:57.20:0,57,2313	0/1:15,0:13:28.52:29,0,260	0/1:8,0:7:34.95:35,0,311	1/1:13,0:12:12.46:184,12,0	1/1:3,0:3:2.22:7,2,0	./.	0/1:5,0:4:18.92:19,0,51	0/0:1,0:1:3.01:0,3,49	0/0:4,0:4:3.01:0,3,69	0/0:11,0:11:7.17:0,7,269	0/1:10,1:10:99:180,0,634	1/1:7,0:7:3.29:92,3,0	0/0:2,0:2:2.82:0,3,59
chr10	48229932	.	C	CAT	583.69	PASS	AB=1.000;AC=12;AF=0.240;AN=50;BaseQRankSum=6.901;DP=352;FS=3.254;HRun=0;HaplotypeScore=77.6999;InbreedingCoeff=0.3710;MQ=56.35;MQ0=8;MQRankSum=-6.349;QD=5.78;ReadPosRankSum=0.814;VQSLOD=2.9310;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:20.35:0,20,397	0/0:6,0:6:18.06:0,18,234	0/0:12,0:11:33.11:0,33,420	0/0:12,0:10:23.97:0,24,285	0/0:15,0:14:12.02:0,12,139	0/0:17,0:17:25.39:0,25,291	0/0:16,0:15:29.87:0,30,339	0/0:51,0:51:28.05:0,28,1037	0/0:11,0:11:21.01:0,21,241	0/1:13,0:12:3.05:3,0,176	0/0:12,0:12:4.93:0,5,65	0/1:6,0:6:3.14:3,0,68	0/1:10,0:10:3.14:3,0,53	0/0:7,0:7:5.99:0,6,61	0/0:19,0:18:42.12:0,42,531	0/0:20,0:20:57.18:0,57,740	0/0:13,0:12:5.52:0,6,59	0/1:10,0:9:7.05:7,0,45	1/1:8,10:17:30.06:408,30,0	1/1:1,6:7:3.01:36,3,0	./.	0/0:8,0:8:11.99:0,12,110	0/0:4,0:4:6.01:0,6,63	./.	0/1:10,0:10:0:0,0,0	0/1:16,0:15:62.79:63,0,176	1/1:4,5:11:15.05:197,15,0	./.
chr10	48229941	.	A	AT	370.62	PASS	AB=0.773;AC=3;AF=0.054;AN=56;BaseQRankSum=5.028;DP=329;FS=5.745;HRun=1;HaplotypeScore=57.1715;InbreedingCoeff=-0.0951;MQ=65.65;MQ0=3;MQRankSum=-5.073;QD=5.37;ReadPosRankSum=-1.300;VQSLOD=0.0416;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:45.02:0,45,560	0/0:6,0:6:18.06:0,18,252	0/0:14,0:13:39.10:0,39,506	0/0:14,0:12:33.07:0,33,436	0/0:10,3:12:18.06:0,18,248	0/0:15,0:15:35.24:0,35,494	0/0:13,0:13:36.08:0,36,479	0/1:39,8:47:99:242,0,1481	0/0:11,0:11:24.08:0,24,334	0/0:10,1:10:21.40:0,21,329	0/0:8,1:9:8.13:0,8,146	0/0:6,0:6:5.10:0,5,101	0/0:8,2:10:5.12:0,5,118	0/0:8,0:8:20.76:0,21,223	0/0:17,0:17:45.15:0,45,628	0/0:23,0:23:69.23:0,69,957	0/0:10,1:11:15.02:0,15,185	0/1:5,3:8:74.69:75,0,164	0/0:15,0:15:12.30:0,12,169	0/0:9,0:9:17.34:0,17,169	0/0:2,0:2:6.01:0,6,65	0/0:5,0:5:12.04:0,12,168	0/0:4,0:4:11.98:0,12,129	0/0:2,1:3:3.01:0,3,40	0/0:5,2:7:11.94:0,12,106	0/1:9,5:13:99:153,0,297	0/0:11,0:11:12.07:0,12,108	0/0:3,1:4:3.01:0,3,40
chr10	48231306	.	A	AATT	1416.60	PASS	AB=0.877;AC=20;AF=0.417;AN=48;BaseQRankSum=-4.700;DP=227;FS=3.335;HRun=0;HaplotypeScore=42.6947;InbreedingCoeff=0.3599;MQ=64.23;MQ0=0;MQRankSum=1.161;QD=10.57;ReadPosRankSum=-1.812;VQSLOD=2.2337;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:11:8.93:0,9,63	0/0:1,0:4:2.98:0,3,21	./.	./.	1/1:8,0:8:6.01:76,6,0	0/0:3,0:10:17.68:0,18,118	0/0:3,0:4:2.98:0,3,21	0/1:33,0:33:27.25:130,0,27	0/0:4,0:7:8.93:0,9,63	1/1:6,3:10:12.04:229,12,0	1/1:2,1:3:3.01:58,3,0	0/0:4,0:8:11.90:0,12,84	0/0:1,0:5:11.90:0,12,84	0/0:7,0:7:12.04:0,12,160	0/0:3,0:5:5.95:0,6,42	0/0:3,0:5:5.95:0,6,42	0/1:10,4:14:28.02:162,0,28	1/1:9,0:17:15.05:196,15,0	0/1:12,1:13:31.01:98,0,31	1/1:5,1:6:3.01:58,3,0	./.	0/0:1,0:2:2.98:0,3,21	0/0:4,0:6:2.98:0,3,21	./.	1/1:3,0:5:5.95:57,6,0	0/1:6,2:8:30.20:107,0,30	1/1:4,2:6:6.02:116,6,0	1/1:4,7:11:15.05:290,15,0
chr10	48232784	.	A	AT	1701.80	PASS	AB=0.855;AC=15;AF=0.268;AN=56;BaseQRankSum=14.682;DP=826;FS=3.322;HRun=3;HaplotypeScore=144.3397;InbreedingCoeff=-0.3635;MQ=62.38;MQ0=0;MQRankSum=-13.980;QD=3.31;ReadPosRankSum=-0.884;VQSLOD=-0.0231;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:38,6:44:52.14:52,0,1109	0/0:10,0:10:21.06:0,21,252	0/0:9,0:9:13.53:0,14,165	0/0:6,0:6:8.98:0,9,107	0/0:30,0:30:90.26:0,90,1067	0/1:31,4:35:70.90:71,0,912	0/1:24,7:31:99:131,0,677	0/1:54,20:74:99:867,0,1264	0/1:23,6:29:50.21:50,0,715	0/0:29,0:29:84.26:0,84,1008	0/0:21,0:21:63.19:0,63,756	0/1:26,5:31:99:116,0,843	0/1:21,4:25:58.75:59,0,617	0/1:25,6:31:86.11:86,0,747	0/1:42,4:46:28.79:29,0,1362	0/1:24,17:41:99:212,0,638	0/1:18,2:20:29.58:30,0,521	0/1:26,3:29:5.43:5,0,757	0/1:29,4:33:53.44:53,0,665	0/0:28,0:28:72.22:0,72,864	0/0:30,1:31:84.24:0,84,995	0/0:25,0:25:63.19:0,63,756	0/0:24,0:24:69.19:0,69,815	0/0:34,1:35:96.29:0,96,1152	0/0:11,0:11:30.09:0,30,360	0/1:28,8:36:77.09:77,0,845	0/0:50,3:50:54.93:0,55,1497	0/1:8,1:9:20.73:21,0,194
chr10	48232803	.	A	ATT	1633.08	PASS	AB=0.871;AC=14;AF=0.250;AN=56;BaseQRankSum=13.926;DP=752;FS=4.982;HRun=2;HaplotypeScore=154.8410;InbreedingCoeff=-0.2812;MQ=60.70;MQ0=0;MQRankSum=-13.120;QD=3.94;ReadPosRankSum=-0.462;VQSLOD=-0.7277;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:29,7:36:86.13:86,0,1103	0/0:9,0:9:27.08:0,27,378	0/1:2,0:3:1.50:4,0,2	0/0:11,0:11:17.99:0,18,192	0/0:32,0:32:90.26:0,90,1267	0/1:33,2:35:39.28:39,0,1227	0/1:26,2:28:99:102,0,750	0/1:55,14:69:99:904,0,1518	0/1:28,4:32:94.52:95,0,975	0/0:32,0:32:93.31:0,93,1368	0/0:24,0:24:69.23:0,69,1016	0/1:22,4:26:45.20:45,0,812	0/1:17,3:20:18.58:19,0,634	0/1:23,5:28:48.74:49,0,814	0/1:42,3:45:83.28:83,0,1529	0/1:23,14:37:99:173,0,845	0/1:14,2:16:99:108,0,526	0/0:23,2:25:44.77:0,45,845	0/0:28,0:28:6.06:0,6,806	0/0:28,0:28:84.28:0,84,1237	0/0:24,2:26:28.78:0,29,1014	0/0:23,0:23:66.21:0,66,953	0/0:20,0:20:60.20:0,60,880	0/0:27,1:28:78.26:0,78,1148	0/0:10,0:10:30.09:0,30,422	0/1:28,5:33:50.06:50,0,1061	0/0:38,4:40:29.40:0,29,1441	0/1:6,0:6:29.56:30,0,203
chr10	48232815	.	CT	C	402.68	PASS	AB=0.794;AC=5;AF=0.089;AN=56;BaseQRankSum=12.811;DP=720;FS=2.272;HRun=5;HaplotypeScore=119.0723;InbreedingCoeff=-0.1089;MQ=68.92;MQ0=0;MQRankSum=-12.129;QD=2.38;ReadPosRankSum=-0.625;VQSLOD=-0.5862;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:27,10:37:79.44:79,0,931	0/0:10,0:10:30.10:0,30,410	0/0:9,0:9:17.48:0,17,274	0/0:18,0:17:45:0,45,491	0/0:26,0:26:66.19:0,66,858	0/0:30,3:33:14.98:0,15,1112	0/0:21,2:23:16.94:0,17,717	0/1:37,19:56:99:352,0,1123	0/0:24,4:28:24.30:0,24,893	0/0:27,0:27:81.23:0,81,1074	0/0:25,0:25:72.24:0,72,983	0/0:21,4:25:8.28:0,8,755	0/0:22,4:26:8.35:0,8,797	0/1:18,5:23:3.43:3,0,675	0/0:36,4:40:20.94:0,21,1184	0/1:23,14:37:60.97:61,0,841	0/1:14,2:16:16.74:17,0,488	0/0:18,2:20:19.36:0,19,622	0/0:31,1:32:48.37:0,48,989	0/0:26,0:26:69.22:0,69,927	0/0:23,3:25:11.92:0,12,839	0/0:20,0:20:54.18:0,54,739	0/0:24,0:24:66.17:0,66,828	0/0:24,2:26:66.22:0,66,902	0/0:10,0:10:30.10:0,30,410	0/0:27,5:32:1.89:0,2,944	0/0:36,4:39:78.73:0,79,1327	0/0:5,0:5:15.05:0,15,205
chr10	48232898	.	G	GT	5074.12	PASS	AB=0.803;AC=26;AF=0.464;AN=56;BaseQRankSum=19.229;DP=805;FS=3.068;HRun=5;HaplotypeScore=114.8950;InbreedingCoeff=-0.8373;MQ=87.33;MQ0=0;MQRankSum=-14.771;QD=6.58;ReadPosRankSum=4.641;VQSLOD=1.0202;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:24,6:30:99:149,0,654	0/1:13,2:15:0.34:0,0,347	0/1:27,7:34:99:175,0,651	0/1:22,8:30:99:199,0,462	0/1:41,10:51:99:217,0,1055	0/1:28,10:38:99:289,0,701	0/1:14,8:22:99:213,0,388	0/1:35,29:64:99:913,0,758	0/1:11,2:13:39.77:40,0,315	0/1:26,12:38:99:356,0,578	0/1:18,8:26:99:243,0,424	0/1:14,8:22:99:222,0,301	0/1:20,6:27:99:192,0,534	0/0:12,0:12:36.09:0,36,387	0/1:24,5:29:99:110,0,687	0/1:16,6:22:99:176,0,391	0/1:26,4:30:34.11:34,0,722	0/1:15,5:20:99:140,0,394	0/1:22,6:28:99:145,0,507	0/1:28,6:34:99:101,0,766	0/1:17,7:24:99:210,0,417	0/1:17,6:23:99:131,0,482	0/1:29,10:39:99:219,0,678	0/0:21,1:22:26.74:0,27,638	0/1:25,4:29:66.91:67,0,631	0/1:19,9:28:99:289,0,353	0/1:32,6:38:91.99:92,0,853	0/1:10,7:17:99:152,0,277
chr10	48233017	.	A	AAAGAAG	7734.94	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-4.900;DP=567;FS=21.017;HRun=0;HaplotypeScore=108.7458;InbreedingCoeff=0.9943;MQ=63.47;MQ0=0;MQRankSum=-12.212;QD=71.62;ReadPosRankSum=-2.493;VQSLOD=3.1822;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:63.22:0,63,1443	0/0:8,0:8:24.08:0,24,553	0/0:11,0:9:24.08:0,24,525	0/0:11,0:12:23.75:0,24,545	0/0:23,0:23:54.19:0,54,1242	0/0:23,0:23:66.21:0,66,1449	0/0:15,0:15:42.14:0,42,924	1/1:13,14:22:54.17:1627,54,0	0/0:25,0:25:69.22:0,69,1546	0/0:25,0:25:72.24:0,72,1617	0/0:26,0:26:66.20:0,66,1433	0/0:14,0:14:36.12:0,36,806	0/0:16,0:16:45.15:0,45,1006	0/0:25,0:25:72.25:0,72,1636	0/0:31,0:31:90.31:0,90,2047	0/0:22,0:22:66.23:0,66,1474	0/0:28,0:28:75.21:0,75,1678	0/0:24,0:24:60.20:0,60,1318	1/1:10,5:15:45.14:1259,45,0	1/1:6,22:29:74.28:2375,74,0	1/1:7,4:10:15.05:467,15,0	0/0:15,0:15:42.13:0,42,924	0/0:27,0:27:69.24:0,69,1520	0/0:22,0:22:63.21:0,63,1407	0/0:14,0:14:36.08:0,36,738	0/0:22,0:22:66.23:0,66,1511	1/1:7,18:25:60.21:2007,60,0	0/0:8,0:8:24.08:0,24,550
chr10	48233299	.	GACAC	G	614.73	PASS	AB=0.857;AC=16;AF=0.348;AN=46;BaseQRankSum=0.547;DP=530;FS=1.154;HRun=0;HaplotypeScore=95.0849;InbreedingCoeff=0.3386;MQ=59.83;MQ0=10;MQRankSum=0.153;QD=3.29;ReadPosRankSum=-0.416;VQSLOD=1.8743;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:24,1:25:3.01:46,3,0	1/1:4,3:7:3.01:45,3,0	./.	./.	0/1:11,0:14:17.94:37,0,18	./.	1/1:17,3:19:2.66:45,3,0	./.	1/1:12,4:16:9.50:139,9,0	./.	0/0:4,0:5:5.73:0,6,35	0/0:15,0:15:9.03:0,9,156	0/0:15,0:15:24.03:0,24,368	0/1:14,2:16:36.85:40,0,37	0/0:19,0:23:11.24:0,11,78	1/1:15,3:18:6.02:92,6,0	1/1:9,4:15:18.16:239,18,0	0/0:12,0:16:11.24:0,11,99	0/0:25,0:25:6.01:0,6,68	0/0:8,0:8:5.98:0,6,90	0/0:35,0:36:33.08:0,33,520	0/0:7,0:7:11.76:0,12,206	0/0:17,0:17:8.98:0,9,157	0/1:28,1:32:45.08:45,0,337	0/1:19,2:24:15.88:37,0,16	0/0:21,0:21:5.30:0,5,76	0/0:7,0:8:8.77:0,9,149	0/0:2,0:3:3.22:0,3,13
chr10	48233596	.	AT	A	12770.65	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=15.220;DP=699;FS=2.321;HRun=1;HaplotypeScore=73.0106;InbreedingCoeff=0.9966;MQ=85.47;MQ0=0;MQRankSum=-3.280;QD=37.90;ReadPosRankSum=5.407;VQSLOD=5.2870;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,138,2174	0/0:5,0:5:15.05:0,15,240	0/0:20,0:20:60.02:0,60,855	0/0:24,0:24:66.36:0,66,976	1/1:0,22:22:63.21:880,63,0	0/0:18,0:18:54.17:0,54,840	0/0:27,0:27:81.28:0,81,1295	0/0:30,0:30:90.28:0,90,1393	0/0:28,0:28:81.28:0,81,1294	1/1:0,28:28:84.26:1153,84,0	1/1:0,8:8:18.06:252,18,0	1/1:0,26:26:69.23:964,69,0	1/1:0,24:24:63.21:881,63,0	1/1:0,35:35:87.29:1217,87,0	0/0:31,0:31:93.30:0,93,1462	0/0:28,0:28:84.27:0,84,1316	1/1:0,43:43:99:1762,126,0	1/1:0,20:20:60.20:839,60,0	0/0:28,0:28:84.28:0,84,1319	0/0:13,0:13:36.12:0,36,576	0/0:38,0:38:99:0,114,1792	1/1:0,24:24:57.19:797,57,0	1/1:0,14:14:33.11:461,33,0	1/1:0,36:36:93.31:1301,93,0	1/1:0,25:25:66.22:923,66,0	1/1:0,22:22:66.22:923,66,0	0/0:24,0:24:72.23:0,72,1128	1/1:0,10:10:30.10:418,30,0
chr10	48234603	.	TTTTTTTTTTTTTTTTTTTGGTTC	T	960.21	PASS	AB=0.909;AC=8;AF=0.143;AN=56;BaseQRankSum=2.892;DP=458;FS=1.135;HRun=0;HaplotypeScore=233.2097;InbreedingCoeff=0.2734;MQ=52.87;MQ0=15;MQRankSum=1.442;QD=8.14;ReadPosRankSum=3.596;VQSLOD=2.6600;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:61.06:0,61,4708	0/0:4,0:4:12.04:0,12,977	0/0:17,0:6:8.86:0,9,58	0/0:14,0:9:3.90:0,4,85	1/1:15,6:21:1.33:28,1,0	0/0:17,0:17:42.13:0,42,2472	0/0:21,0:21:43.65:0,44,2776	0/0:37,0:34:68.39:0,68,3358	0/0:11,0:11:27.06:0,27,1620	0/1:13,1:13:33.56:154,0,34	0/0:14,0:12:6.86:0,7,57	0/0:19,0:19:33.01:0,33,2008	0/0:11,0:11:20.03:0,20,1019	0/0:11,0:11:10.89:0,11,64	0/0:14,0:14:24.08:0,24,1793	0/0:11,0:11:25.29:0,25,1867	0/1:18,13:31:6.25:637,0,6	0/1:26,0:25:99:233,0,102	0/0:19,0:16:21.54:0,22,1212	0/0:11,0:11:26.12:0,26,1560	0/0:15,0:14:27.09:0,27,1752	0/0:10,0:9:15.05:0,15,648	0/0:11,0:11:24.90:0,25,1081	0/0:17,0:15:15:0,15,1044	1/1:7,0:6:2.72:24,3,0	0/1:19,0:18:4.40:4,0,62	0/0:25,0:24:52.06:0,52,3995	0/0:3,0:2:0:0,0,0
chr10	48237934	.	CT	C	3053.44	PASS	AB=0.863;AC=22;AF=0.393;AN=56;BaseQRankSum=10.524;DP=539;FS=0.368;HRun=12;HaplotypeScore=64.6456;InbreedingCoeff=0.8259;MQ=71.46;MQ0=2;MQRankSum=0.475;QD=11.79;ReadPosRankSum=1.795;VQSLOD=3.4238;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,1:20:21.63:0,22,365	0/1:6,1:7:5:5,0,134	0/0:10,0:8:5.88:0,6,75	0/0:15,1:14:7.51:0,8,50	1/1:9,24:34:18.80:497,19,0	0/0:21,3:24:30.86:0,31,489	0/0:13,0:14:24.02:0,24,229	1/1:7,0:28:42.16:124,42,0	0/0:11,0:11:27.05:0,27,274	1/1:3,17:22:24.42:350,24,0	1/1:4,22:29:65.78:477,66,0	0/0:12,0:12:33.04:0,33,321	0/0:19,0:19:48.08:0,48,477	1/1:4,13:18:7.39:227,7,0	0/0:20,1:21:24.84:0,25,425	0/1:18,4:23:3.83:4,0,464	1/1:3,20:24:52.83:401,53,0	1/1:6,14:21:13.42:277,13,0	0/0:21,0:21:30.04:0,30,294	0/0:23,2:26:8.52:0,9,437	0/0:16,1:17:18.83:0,19,358	0/0:18,0:18:23.03:0,23,369	0/0:21,4:25:33.85:0,34,509	0/0:4,1:6:8.84:0,9,68	1/1:3,16:21:42.92:314,43,0	1/1:3,19:22:53.57:405,54,0	0/0:16,1:19:24.51:0,25,394	1/1:2,8:10:23.90:186,24,0
chr10	48238564	.	GA	G	12731.34	PASS	AC=52;AF=0.963;AN=54;BaseQRankSum=0.309;DP=388;FS=0.000;HRun=2;HaplotypeScore=285.9907;InbreedingCoeff=0.6014;MQ=31.54;MQ0=0;MQRankSum=-1.732;QD=32.90;ReadPosRankSum=0.907;VQSLOD=3.7406;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,19:19:51.17:658,51,0	1/1:0,9:9:26.97:308,27,0	./.	0/0:1,0:1:2.90:0,3,16	1/1:2,24:26:53.67:677,54,0	1/1:0,15:15:45.08:545,45,0	1/1:2,11:13:33.05:406,33,0	1/1:3,17:20:48.16:621,48,0	1/1:0,10:10:24.03:310,24,0	1/1:2,24:26:72.23:923,72,0	1/1:1,19:20:51.16:641,51,0	1/1:1,12:13:39.12:496,39,0	1/1:0,15:15:42.13:533,42,0	1/1:0,8:8:24.08:301,24,0	1/1:0,11:11:27.09:338,27,0	1/1:0,10:10:30.10:383,30,0	1/1:0,9:9:24.08:310,24,0	1/1:0,1:1:3.01:39,3,0	1/1:0,5:5:15.05:194,15,0	1/1:3,33:36:90.29:1141,90,0	1/1:0,11:11:30.10:387,30,0	1/1:1,21:22:60.18:750,60,0	1/1:0,14:14:36.12:461,36,0	1/1:1,7:8:15.04:186,15,0	1/1:2,20:22:54.17:693,54,0	1/1:2,11:11:27.09:349,27,0	1/1:0,26:26:72.23:931,72,0	1/1:0,5:5:12.04:149,12,0
chr10	48238577	.	CA	C	11724.32	PASS	AC=52;AF=0.963;AN=54;BaseQRankSum=0.563;DP=406;FS=0.000;HRun=3;HaplotypeScore=298.7483;InbreedingCoeff=0.6469;MQ=36.13;MQ0=0;MQRankSum=-1.732;QD=29.09;ReadPosRankSum=0.792;VQSLOD=3.0286;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,21:21:48.15:594,48,0	1/1:0,10:10:30.09:371,30,0	./.	0/0:1,0:2:2.88:0,3,15	1/1:1,24:25:57.18:704,57,0	1/1:0,16:16:42.13:520,42,0	1/1:0,11:11:27.08:334,27,0	1/1:3,14:17:42.13:520,42,0	1/1:1,12:13:33.06:408,33,0	1/1:0,22:22:66.21:816,66,0	1/1:1,18:19:30.09:371,30,0	1/1:1,13:14:36.11:445,36,0	1/1:1,18:19:48.15:594,48,0	1/1:0,8:8:18.06:223,18,0	1/1:0,13:13:36.11:445,36,0	1/1:0,10:10:30.09:371,30,0	1/1:1,8:9:15.05:186,15,0	1/1:0,2:2:6.02:74,6,0	1/1:1,7:8:21.07:260,21,0	1/1:1,31:33:78.24:964,78,0	1/1:2,10:12:21.07:260,21,0	1/1:0,24:24:57.18:704,57,0	1/1:1,14:15:24:296,24,0	1/1:2,9:11:15.05:185,15,0	1/1:2,22:24:54.17:668,54,0	1/1:2,13:12:30.09:371,30,0	1/1:2,25:27:69.22:854,69,0	1/1:0,5:5:15.05:186,15,0
chr10	48238667	.	AAC	A	6325.95	PASS	AB=0.989;AC=45;AF=0.833;AN=54;BaseQRankSum=-1.345;DP=476;FS=1.731;HRun=0;HaplotypeScore=303.2159;InbreedingCoeff=-0.1639;MQ=60.87;MQ0=1;MQRankSum=-5.001;QD=13.32;ReadPosRankSum=10.184;VQSLOD=3.5362;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:6,0:6:6.15:43,0,6	1/1:10,0:10:5.70:136,6,0	0/1:14,1:13:4.47:4,0,142	0/1:25,1:26:54.15:54,0,201	1/1:32,1:33:88.71:600,89,0	1/1:16,0:16:27.13:255,27,0	1/1:10,0:10:10.61:158,11,0	1/1:21,0:21:10.12:247,10,0	0/1:8,0:8:38.14:53,0,38	1/1:27,0:27:21.35:376,21,0	1/1:23,1:24:50.27:448,50,0	1/1:14,0:14:41.22:259,41,0	1/1:23,0:22:4.01:275,4,0	1/1:14,1:15:5.38:214,5,0	0/1:24,0:24:6.96:302,0,7	1/1:20,0:20:1.16:239,1,0	0/1:10,0:10:11.33:123,0,11	./.	0/1:7,0:7:6.62:80,0,7	1/1:27,1:28:58.88:479,59,0	1/1:1,0:1:2.97:20,3,0	0/1:27,0:27:3.91:340,0,4	1/1:18,0:18:50.24:330,50,0	0/1:8,0:8:38.77:39,0,39	1/1:33,0:33:68.63:536,69,0	1/1:22,0:22:23.81:322,24,0	1/1:16,0:16:16.28:195,16,0	1/1:13,0:13:18.30:198,18,0
chr10	48239127	.	CT	C	793.19	PASS	AB=0.938;AC=11;AF=0.212;AN=52;BaseQRankSum=-4.185;DP=467;FS=15.105;HRun=11;HaplotypeScore=77.7625;InbreedingCoeff=0.7263;MQ=37.00;MQ0=42;MQRankSum=-4.299;QD=6.56;ReadPosRankSum=0.360;VQSLOD=0.5492;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:28:38.40:0,38,344	0/0:7,0:8:1.08:0,1,56	./.	./.	0/0:30,1:32:7.63:0,8,144	0/0:12,0:11:14.99:0,15,147	0/0:11,1:10:1.99:0,2,188	1/1:11,19:28:50.50:417,50,0	0/1:14,1:15:4.62:5,0,119	0/0:23,0:17:26.18:0,26,158	0/0:15,0:13:18.36:0,18,113	0/0:10,0:10:16.33:0,16,144	0/0:13,0:13:20.97:0,21,173	0/0:10,0:8:18.13:0,18,87	0/0:16,0:14:17.99:0,18,166	0/0:15,1:15:5.41:0,5,236	0/0:22,0:19:28.83:0,29,171	0/0:17,0:10:15.26:0,15,75	1/1:12,7:17:25.36:195,25,0	1/1:8,13:19:23.91:196,24,0	1/1:5,4:4:5.99:49,6,0	0/0:10,0:11:17.67:0,18,155	0/0:17,1:18:14.07:0,14,287	0/0:18,0:14:17.87:0,18,162	0/0:21,0:17:26.02:0,26,148	0/0:17,0:16:29.29:0,29,153	1/1:14,13:24:8.11:91,8,0	0/0:13,0:11:23.35:0,23,160
chr10	48239138	.	T	TC	2103.18	PASS	AB=0.667;AC=17;AF=0.327;AN=52;BaseQRankSum=-2.435;DP=388;FS=7.510;HRun=1;HaplotypeScore=60.0597;InbreedingCoeff=0.8799;MQ=36.63;MQ0=49;MQRankSum=-2.314;QD=14.41;ReadPosRankSum=3.181;VQSLOD=2.9192;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:20:27.06:0,27,316	0/0:5,0:5:11.91:0,12,111	./.	./.	1/1:10,15:25:32.10:337,32,0	0/0:12,0:10:20.98:0,21,222	0/0:13,0:10:23.91:0,24,245	0/0:27,0:27:70.54:0,71,433	0/0:7,0:7:14.91:0,15,138	0/1:10,10:14:0.62:245,0,1	1/1:6,10:13:12.04:158,12,0	0/0:6,0:6:15.04:0,15,176	0/0:11,0:10:18.04:0,18,203	1/1:3,5:6:15.03:178,15,0	0/0:14,0:12:18.03:0,18,196	0/0:19,0:17:33:0,33,364	1/1:6,13:16:21.07:273,21,0	1/1:6,9:9:7.76:189,8,0	0/0:13,0:12:35.01:0,35,218	0/0:16,0:14:22.99:0,23,123	0/0:12,0:6:11.79:0,12,78	0/0:7,0:7:2.30:0,2,141	0/0:18,0:17:32.93:0,33,344	0/0:16,0:13:23.99:0,24,243	1/1:6,10:13:21.07:275,21,0	1/1:5,9:13:30.20:395,30,0	0/0:19,0:15:26.65:0,27,189	1/1:5,6:9:21.04:248,21,0
chr10	48240393	.	T	TA	2923.42	PASS	AB=0.676;AC=30;AF=0.536;AN=56;BaseQRankSum=-3.133;DP=436;FS=6.957;HRun=14;HaplotypeScore=48.8824;InbreedingCoeff=0.2605;MQ=75.25;MQ0=2;MQRankSum=1.431;QD=9.25;ReadPosRankSum=-1.957;VQSLOD=1.8770;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,1:24:19.86:0,20,248	0/0:5,0:5:8.86:0,9,58	0/1:21,0:15:7.35:7,0,24	0/0:16,0:8:5.70:0,6,33	1/1:7,8:16:26.72:209,27,0	0/0:15,1:19:12.20:0,12,182	0/0:9,1:11:2.29:0,2,132	1/1:16,2:24:28.18:163,28,0	0/0:15,0:15:25.61:0,26,160	1/1:1,7:9:23.71:187,24,0	1/1:5,13:18:23.50:264,24,0	0/1:4,11:15:11.47:158,0,11	1/1:4,7:11:9.36:101,9,0	0/1:7,7:15:4.28:86,0,4	0/0:18,0:18:41.25:0,41,268	0/0:11,0:11:20.62:0,21,132	0/1:9,11:20:2.55:221,0,3	0/1:6,6:12:37.93:38,0,40	0/1:7,3:10:36.88:74,0,37	0/1:10,16:27:4.23:285,0,4	1/1:5,7:12:11.45:126,11,0	1/1:4,13:18:38.74:321,39,0	1/1:2,2:4:6:53,6,0	0/1:6,7:13:39.80:61,0,40	0/1:6,16:22:46.42:219,0,46	1/1:7,12:20:33.37:273,33,0	0/1:8,13:21:33.07:211,0,33	1/1:2,3:5:6:53,6,0
chr10	48243668	.	T	TG	3142.31	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-11.789;DP=559;FS=0.469;HRun=2;HaplotypeScore=50.9537;InbreedingCoeff=0.9981;MQ=80.50;MQ0=0;MQRankSum=-1.991;QD=36.12;ReadPosRankSum=1.296;VQSLOD=3.9080;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,126,1547	0/0:7,0:7:21.07:0,21,257	0/0:19,0:19:48.09:0,48,553	0/0:10,0:10:27.01:0,27,308	0/0:23,0:23:66.18:0,66,793	0/0:13,0:13:39.11:0,39,473	0/0:33,0:33:93.29:0,93,1152	0/0:19,0:19:48.14:0,48,584	0/0:23,0:23:69.22:0,69,855	0/0:17,0:17:51.15:0,51,620	0/0:10,0:10:30.08:0,30,360	0/0:16,0:16:48.15:0,48,595	0/0:15,0:15:45.08:0,45,509	0/0:22,0:22:63.20:0,63,781	0/0:21,0:21:63.18:0,63,758	0/0:24,0:24:69.21:0,69,843	0/0:26,0:26:75.24:0,75,929	0/0:23,0:23:63.20:0,63,777	1/1:2,19:21:57.17:799,57,0	1/1:0,14:14:39.13:561,39,0	1/1:1,38:39:99:1425,99,0	0/0:14,0:14:36.11:0,36,446	0/0:17,0:17:48.15:0,48,595	0/0:35,0:35:99:0,102,1250	0/0:13,0:13:36.08:0,36,419	0/0:19,0:19:54.17:0,54,669	1/1:1,12:13:36.12:518,36,0	0/0:10,0:10:30.09:0,30,372
chr10	48244980	.	CT	C	6061.15	PASS	AB=0.893;AC=37;AF=0.661;AN=56;BaseQRankSum=8.027;DP=583;FS=9.611;HRun=10;HaplotypeScore=58.8637;InbreedingCoeff=0.9067;MQ=66.31;MQ0=3;MQRankSum=1.769;QD=15.34;ReadPosRankSum=3.893;VQSLOD=4.5858;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:35:69.52:0,70,777	0/0:10,0:10:24.06:0,24,264	0/0:19,0:10:5.89:0,6,38	0/1:22,2:14:7.37:7,0,49	1/1:4,12:16:32.98:286,33,0	0/0:23,1:25:15.30:0,15,502	0/0:23,0:23:27.07:0,27,298	0/0:28,0:27:51.61:0,52,566	0/0:8,0:9:23.90:0,24,244	1/1:6,17:22:50.97:439,51,0	1/1:7,8:15:17.99:155,18,0	1/1:3,14:17:35.99:313,36,0	1/1:3,12:15:32.99:286,33,0	1/1:5,7:12:11.98:104,12,0	0/0:24,0:24:45.06:0,45,470	0/0:12,0:12:26.90:0,27,272	1/1:5,22:26:59.97:521,60,0	1/1:2,16:18:38.99:339,39,0	1/1:9,13:20:35.93:303,36,0	1/1:3,16:19:38.98:338,39,0	1/1:1,12:13:26.99:234,27,0	1/1:5,17:22:32.97:285,33,0	1/1:5,14:19:38.98:338,39,0	1/1:7,19:26:68.87:583,69,0	1/1:4,21:25:41.99:365,42,0	1/1:10,11:20:32.94:281,33,0	1/1:7,22:29:47.98:416,48,0	1/1:9,22:31:53.97:469,54,0
chr10	48245211	.	T	TGCCCCTAACATTTTAAAGCTTTC	30355.51	PASS	AB=0.625;AC=52;AF=0.963;AN=54;BaseQRankSum=-3.650;DP=229;FS=15.295;HRun=0;HaplotypeScore=330.4285;InbreedingCoeff=-0.0751;MQ=69.91;MQ0=0;MQRankSum=-1.364;QD=132.56;ReadPosRankSum=2.402;VQSLOD=3.5015;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,0:6:18.06:705,18,0	1/1:4,0:4:12.04:717,12,0	0/1:4,1:8:32.03:1071,0,32	0/1:2,0:7:8.25:958,0,8	1/1:14,0:14:33.10:1794,33,0	1/1:7,0:7:4.41:370,4,0	1/1:5,0:5:15.05:933,15,0	1/1:8,0:8:18.06:1273,18,0	1/1:7,0:7:10.28:351,10,0	1/1:13,0:13:28.06:1971,28,0	1/1:15,0:15:19.59:1867,20,0	1/1:6,0:6:16.30:897,16,0	1/1:7,0:7:21.07:1231,21,0	1/1:4,0:4:0.70:851,1,0	1/1:10,0:10:4.50:1067,5,0	1/1:8,0:8:24.08:1363,24,0	1/1:8,0:8:13.60:973,14,0	1/1:7,0:7:8.34:689,8,0	1/1:4,0:4:12.04:488,12,0	1/1:5,0:5:15.05:929,15,0	./.	1/1:9,0:9:5.23:1347,5,0	1/1:15,0:15:19.25:1631,19,0	1/1:3,0:3:8.99:360,9,0	1/1:7,0:7:14.60:1031,15,0	1/1:11,0:11:31.67:2014,32,0	1/1:20,0:20:41.09:2868,41,0	1/1:11,0:10:18.82:606,19,0
chr10	48245748	.	CA	C	3136.39	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=14.418;DP=692;FS=2.930;HRun=4;HaplotypeScore=77.1413;InbreedingCoeff=0.9996;MQ=87.16;MQ0=0;MQRankSum=-1.815;QD=30.16;ReadPosRankSum=1.367;VQSLOD=3.9460;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:40:99:0,117,1567	0/0:13,0:13:39.13:0,39,546	0/0:20,0:20:54.05:0,54,710	0/0:27,0:27:27.40:0,27,755	0/0:36,0:36:99:0,99,1385	0/0:36,0:36:99:0,108,1476	0/0:19,0:19:57.17:0,57,780	0/0:29,0:29:87.28:0,87,1203	0/0:14,0:14:39.13:0,39,546	0/0:31,0:31:93.28:0,93,1256	0/0:27,0:27:78.26:0,78,1092	0/0:26,0:26:78.24:0,78,1059	0/0:22,0:22:63.21:0,63,881	0/0:21,0:21:60.18:0,60,822	0/0:30,0:30:84.26:0,84,1144	0/0:30,0:30:87.29:0,87,1218	0/0:19,0:19:57.18:0,57,781	0/0:13,0:13:39.11:0,39,526	1/1:3,26:29:78.23:910,78,0	1/1:1,20:21:51.08:578,51,0	1/1:1,21:22:63.19:736,63,0	0/0:31,0:30:90.29:0,90,1243	0/0:19,0:19:54.18:0,54,756	0/0:16,0:16:45.15:0,45,630	0/0:26,0:26:78.26:0,78,1092	0/0:31,0:31:90.30:0,90,1261	1/1:3,29:32:93.26:1073,93,0	0/0:11,0:11:33.07:0,33,425
chr10	48247092	.	G	GA	906.32	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-8.876;DP=549;FS=0.000;HRun=7;HaplotypeScore=52.2978;InbreedingCoeff=0.9867;MQ=72.93;MQ0=0;MQRankSum=-0.902;QD=28.32;ReadPosRankSum=-4.927;VQSLOD=1.8675;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:57.09:0,57,550	0/0:10,0:10:24.03:0,24,232	0/0:17,0:17:35.59:0,36,322	0/0:10,0:10:24.03:0,24,227	0/0:29,0:29:81.10:0,81,770	0/0:22,0:22:54.08:0,54,521	0/0:9,0:9:27.04:0,27,261	1/1:4,28:32:84.24:1001,84,0	0/0:11,0:11:30.05:0,30,290	0/0:23,0:23:60.08:0,60,575	0/0:23,0:23:69.09:0,69,660	0/0:14,0:14:42.07:0,42,406	0/0:10,0:10:24.04:0,24,232	0/0:16,0:16:45.06:0,45,428	0/0:28,0:28:84.14:0,84,810	0/0:19,0:19:51.08:0,51,493	0/0:10,0:10:24.04:0,24,231	0/0:10,0:10:27.04:0,27,261	0/0:9,0:9:24.03:0,24,227	0/0:35,0:35:99:0,99,956	0/0:23,0:23:66.05:0,66,623	0/0:20,0:20:60.08:0,60,574	0/0:17,0:17:48.07:0,48,464	0/0:19,0:19:54.04:0,54,512	0/0:27,0:27:81.13:0,81,782	0/0:30,0:30:87.14:0,87,840	0/0:46,0:46:99:0,135,1298	0/0:10,0:10:30.05:0,30,289
chr10	48247901	.	TA	T	829.26	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.416;DP=635;FS=0.000;HRun=4;HaplotypeScore=56.7795;InbreedingCoeff=0.9970;MQ=81.23;MQ0=0;MQRankSum=-2.913;QD=29.62;ReadPosRankSum=-3.268;VQSLOD=1.9936;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:90.27:0,90,1223	0/0:8,0:8:24.08:0,24,336	0/0:19,0:19:57.02:0,57,699	0/0:13,0:13:38.94:0,39,473	0/0:22,0:22:66.21:0,66,907	0/0:33,0:33:93.28:0,93,1266	0/0:15,0:15:39.13:0,39,545	1/1:1,27:28:81.19:924,81,0	0/0:21,0:21:60.19:0,60,825	0/0:34,0:34:99:0,99,1373	0/0:23,0:23:69.22:0,69,949	0/0:11,0:11:33.10:0,33,446	0/0:22,0:22:66.21:0,66,907	0/0:17,0:17:48.15:0,48,656	0/0:19,0:19:57.17:0,57,765	0/0:19,0:19:57.19:0,57,797	0/0:31,0:31:90.29:0,90,1242	0/0:23,0:23:63.21:0,63,881	0/0:13,0:13:36.11:0,36,486	0/0:39,0:39:99:0,108,1497	0/0:11,0:11:33.11:0,33,462	0/0:36,0:36:99:0,105,1421	0/0:28,0:28:81.27:0,81,1122	0/0:16,0:16:48.16:0,48,672	0/0:29,0:29:84.26:0,84,1157	0/0:26,0:26:75.23:0,75,1005	0/0:34,0:33:99:0,99,1329	0/0:13,0:13:33.11:0,33,462
chr10	48248487	.	ATATC	A	4361.17	PASS	AB=0.987;AC=36;AF=0.692;AN=52;BaseQRankSum=1.808;DP=589;FS=7.429;HRun=0;HaplotypeScore=157.8475;InbreedingCoeff=0.2406;MQ=62.33;MQ0=3;MQRankSum=-2.665;QD=9.56;ReadPosRankSum=1.259;VQSLOD=3.7984;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:22,2:24:9.52:613,0,10	1/1:3,2:5:3.01:49,3,0	0/0:31,0:24:12.04:0,12,210	0/0:14,0:12:9.03:0,9,185	./.	1/1:7,10:17:6.02:98,6,0	1/1:11,15:26:9.03:147,9,0	0/0:31,0:30:3.48:0,3,60	1/1:4,13:17:6.02:98,6,0	1/1:19,0:19:0.46:208,0,0	0/0:16,0:16:2.97:0,3,20	0/1:29,0:29:6.03:144,0,6	1/1:32,0:32:21.01:238,21,0	1/1:22,0:21:9.01:85,9,0	1/1:23,4:27:50.17:754,50,0	1/1:20,1:21:45.15:736,45,0	1/1:22,0:22:24.34:236,24,0	0/0:4,0:3:2.84:0,3,14	1/1:17,0:17:9.93:203,10,0	0/1:23,0:23:7.15:69,0,7	1/1:8,0:7:0.89:2,1,0	./.	0/1:21,0:21:13:22,0,13	1/1:23,0:22:5.46:29,5,0	1/1:23,0:23:6.01:60,6,0	0/1:28,0:28:1.99:220,0,2	0/1:29,0:28:21.62:260,0,22	1/1:23,0:23:9.02:89,9,0
chr10	48248504	.	T	TATC	3180.38	PASS	AB=0.972;AC=23;AF=0.442;AN=52;BaseQRankSum=2.854;DP=566;FS=1.674;HRun=0;HaplotypeScore=166.0536;InbreedingCoeff=0.1573;MQ=43.96;MQ0=8;MQRankSum=-5.437;QD=9.41;ReadPosRankSum=1.353;VQSLOD=3.5392;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:47.19:0,47,543	0/0:8,0:8:8.92:0,9,109	0/0:17,0:10:24.02:0,24,307	0/0:6,0:5:12.04:0,12,192	./.	0/0:17,0:16:15.03:0,15,189	0/0:21,0:19:13.27:0,13,110	0/0:32,0:31:82.47:0,82,1136	0/0:20,0:20:14.89:0,15,188	0/1:20,0:20:73.21:467,0,73	1/1:16,0:16:3.01:43,3,0	0/1:29,0:29:25.61:197,0,26	0/1:25,7:31:41.97:321,0,42	1/1:16,0:15:4.66:13,5,0	0/0:24,0:24:54.31:0,54,567	0/0:21,0:21:53.94:0,54,582	1/1:19,1:17:30:436,30,0	1/1:3,1:3:3.01:42,3,0	0/1:17,0:17:11.24:363,0,11	0/1:26,1:27:65.27:274,0,65	1/1:12,0:10:3.01:65,3,0	./.	0/1:25,0:25:48.36:48,0,72	0/1:27,1:27:9.71:59,0,10	1/1:21,0:21:6:64,6,0	0/1:24,0:24:36.01:463,0,36	0/1:27,0:26:56.44:391,0,56	1/1:20,0:19:9.02:104,9,0
chr10	48248506	.	TC	T	1203.85	PASS	AB=0.974;AC=28;AF=0.538;AN=52;BaseQRankSum=6.519;DP=567;FS=4.637;HRun=1;HaplotypeScore=163.0045;InbreedingCoeff=-0.1796;MQ=43.17;MQ0=8;MQRankSum=-1.068;QD=2.72;ReadPosRankSum=7.317;VQSLOD=-0.2666;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:30:21.90:22,0,97	0/1:6,2:8:2.80:3,0,59	0/0:16,0:9:27.07:0,27,391	0/0:6,0:5:15.05:0,15,237	./.	0/0:16,0:15:9.97:0,10,134	0/0:23,0:21:6.61:0,7,57	0/0:32,0:31:93.15:0,93,1323	0/1:18,3:21:39.47:39,0,94	0/1:20,0:20:97.94:175,0,98	1/1:16,0:16:2.92:17,3,0	0/1:29,0:29:56.49:99,0,56	0/1:31,0:30:85:118,0,85	1/1:16,0:15:5.59:16,6,0	0/1:23,0:23:16.37:16,0,88	0/1:20,1:21:28.39:28,0,66	1/1:21,0:18:25.24:178,25,0	1/1:4,0:3:2.98:21,3,0	0/1:16,0:16:90.57:133,0,91	0/1:25,0:25:62.59:63,0,98	1/1:13,0:11:2.51:14,3,0	./.	0/1:26,0:26:17.47:17,0,75	0/1:30,0:29:8.97:10,0,9	1/1:22,0:22:5.19:29,5,0	0/1:24,0:24:71.18:152,0,71	0/1:27,0:26:74.61:162,0,75	1/1:19,0:18:8:50,8,0
chr10	48248507	.	CTATCTATT	C	8078.55	PASS	AB=1.000;AC=33;AF=0.611;AN=54;BaseQRankSum=-5.700;DP=564;FS=0.477;HRun=0;HaplotypeScore=176.8029;InbreedingCoeff=0.7380;MQ=42.57;MQ0=8;MQRankSum=-5.409;QD=22.13;ReadPosRankSum=0.334;VQSLOD=4.1409;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:52.38:0,52,580	0/0:8,0:8:11.61:0,12,108	0/0:16,0:9:24.02:0,24,344	0/0:5,0:4:12.04:0,12,267	./.	0/0:16,0:15:20.86:0,21,211	0/0:23,0:21:16.85:0,17,119	0/1:30,0:30:99:104,0,394	0/0:21,0:21:25.87:0,26,237	1/1:2,18:20:6.06:882,6,0	1/1:2,2:16:3.01:42,3,0	1/1:5,4:29:32.92:803,33,0	1/1:12,0:28:33.07:692,33,0	1/1:1,15:15:9.03:268,9,0	0/0:24,0:24:58.60:0,59,583	0/0:23,0:23:54.53:0,55,569	1/1:9,1:18:28.74:771,29,0	1/1:1,1:3:3.90:44,4,0	1/1:0,16:16:48.01:948,48,0	1/1:8,2:24:23.95:432,24,0	1/1:9,0:11:2.41:64,2,0	0/0:2,0:13:0:0,0,0	1/1:8,4:26:12.04:246,12,0	1/1:12,3:29:5.84:154,6,0	1/1:2,20:22:6.02:175,6,0	1/1:1,22:23:39.96:1029,40,0	1/1:11,7:25:44.15:1167,44,0	1/1:3,17:19:8.05:259,8,0
chr10	48248511	.	CTAT	C	4062.16	PASS	AB=0.987;AC=37;AF=0.685;AN=54;BaseQRankSum=3.569;DP=570;FS=3.664;HRun=0;HaplotypeScore=167.4418;InbreedingCoeff=0.1160;MQ=41.50;MQ0=10;MQRankSum=1.174;QD=8.06;ReadPosRankSum=5.976;VQSLOD=2.5132;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:29:3.18:117,0,3	0/1:7,0:7:15.90:45,0,16	0/0:12,0:5:3.01:0,3,42	0/0:4,0:3:6.02:0,6,84	./.	0/0:17,0:16:2.05:0,2,153	0/1:25,0:22:6.46:6,0,54	0/1:31,0:31:99:430,0,212	0/1:19,3:22:48.62:105,0,49	0/1:20,0:20:90.75:322,0,91	0/1:18,0:17:0.01:0,0,0	1/1:29,1:30:21.63:237,22,0	1/1:20,6:25:8.49:338,8,0	1/1:16,0:15:9.02:90,9,0	1/1:25,0:24:12.74:184,13,0	1/1:25,0:25:16.61:264,17,0	1/1:21,0:18:26.39:348,26,0	0/1:4,0:3:0.01:0,0,0	0/1:17,0:17:21.75:332,0,22	1/1:24,0:24:3.60:127,4,0	1/1:14,0:12:2.79:22,3,0	0/0:13,0:13:0:0,0,0	1/1:26,0:26:7.43:46,7,0	1/1:29,1:29:4.84:54,5,0	1/1:23,0:23:6.01:72,6,0	1/1:23,0:23:13.72:339,14,0	1/1:28,0:27:6.74:421,7,0	1/1:20,0:19:12.04:162,12,0
chr10	48248514	.	T	TC	4325.22	PASS	AB=0.810;AC=35;AF=0.648;AN=54;BaseQRankSum=1.968;DP=571;FS=5.496;HRun=0;HaplotypeScore=158.6928;InbreedingCoeff=0.0573;MQ=41.05;MQ0=12;MQRankSum=1.165;QD=8.33;ReadPosRankSum=3.626;VQSLOD=4.4640;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:23,6:29:20.99:258,21,0	0/1:5,2:7:1.75:38,0,2	0/0:8,0:2:3.01:0,3,42	0/0:3,0:2:6.02:0,6,84	./.	0/0:17,0:16:1.98:0,2,153	0/1:26,0:23:7.38:7,0,52	0/1:25,9:33:99:478,0,201	0/1:23,1:24:26:163,0,26	0/1:20,0:20:75.63:323,0,76	0/1:5,10:14:0:0,0,0	0/1:12,17:29:8.89:146,0,9	1/1:14,11:24:14.61:259,15,0	1/1:17,0:16:7.95:32,8,0	1/1:20,4:23:32.80:386,33,0	1/1:18,7:25:48.72:444,49,0	1/1:9,12:19:25.70:334,26,0	0/0:3,1:3:1.82:0,2,5	0/1:19,1:20:37.78:347,0,38	1/1:11,13:24:1.61:158,2,0	1/1:12,3:12:2.83:22,3,0	0/1:11,2:13:0:0,0,0	1/1:13,10:23:5.19:58,5,0	0/1:11,17:27:3.75:34,0,4	1/1:23,2:24:6:71,6,0	1/1:24,0:24:10.53:280,11,0	0/1:18,10:27:8.54:324,0,9	1/1:19,1:19:12.04:160,12,0
chr10	48248567	.	TATCC	T	823.01	PASS	AB=0.944;AC=8;AF=0.143;AN=56;BaseQRankSum=-0.442;DP=645;FS=3.720;HRun=0;HaplotypeScore=181.9363;InbreedingCoeff=0.7131;MQ=45.46;MQ0=15;MQRankSum=4.074;QD=7.69;ReadPosRankSum=0.213;VQSLOD=2.8940;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:38:48.35:0,48,418	0/0:10,0:10:19.24:0,19,160	0/0:10,0:9:17.66:0,18,197	0/1:7,0:7:1.19:1,0,42	0/0:13,0:13:6:0,6,52	0/0:24,0:23:51.01:0,51,571	0/0:20,0:18:16.79:0,17,127	0/0:47,0:43:41.58:0,42,305	0/0:30,0:30:68.96:0,69,701	0/0:18,0:18:33.40:0,33,362	0/0:26,0:25:24.28:0,24,230	0/0:9,20:29:0:0,0,0	0/1:29,0:28:8.20:322,0,8	0/0:22,0:20:26.01:0,26,184	0/0:34,0:33:62.98:0,63,567	0/0:33,0:33:68.95:0,69,656	0/0:16,0:13:12.48:0,12,134	0/0:9,0:8:20.63:0,21,141	0/0:26,0:22:35.37:0,35,307	0/0:18,0:18:24.39:0,24,197	0/0:18,0:15:15.38:0,15,123	1/1:23,0:23:36.90:302,37,0	1/1:22,0:22:30:195,30,0	1/1:25,0:24:18.23:149,18,0	0/0:21,0:20:20.91:0,21,292	0/0:24,0:24:35.73:0,36,344	0/0:40,0:39:60.78:0,61,516	0/0:11,0:11:14.93:0,15,118
chr10	48248749	.	TA	T	2568.92	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=13.793;DP=597;FS=30.908;HRun=1;HaplotypeScore=124.6826;InbreedingCoeff=0.9634;MQ=76.13;MQ0=1;MQRankSum=-12.871;QD=31.72;ReadPosRankSum=6.791;VQSLOD=1.4150;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,117,1846	0/0:11,0:11:33.11:0,33,527	0/0:31,0:23:66.68:0,67,993	0/0:29,0:25:61.51:0,62,865	1/1:0,9:12:30.05:351,30,0	0/0:15,0:15:45.15:0,45,719	0/0:20,0:20:60.19:0,60,932	0/0:23,0:23:69.24:0,69,1104	0/0:30,0:30:87.28:0,87,1364	1/1:1,6:7:18.06:232,18,0	1/1:1,10:11:30.09:367,30,0	0/0:26,0:26:69.23:0,69,1091	0/0:22,0:22:63.21:0,63,999	1/1:0,14:14:36.11:451,36,0	0/0:36,0:36:99:0,105,1662	0/0:35,0:35:99:0,105,1651	1/1:0,3:3:9.03:114,9,0	1/1:0,3:3:9.03:117,9,0	0/0:23,0:23:69.23:0,69,1095	0/0:39,0:38:99:0,114,1823	0/0:35,0:35:99:0,105,1676	0/0:19,0:19:51.17:0,51,815	0/0:18,0:18:48.15:0,48,736	0/0:29,0:29:87.30:0,87,1391	1/1:0,16:16:48.15:606,48,0	1/1:0,12:13:36.12:462,36,0	0/0:35,0:34:87.30:0,87,1390	1/1:0,2:2:6.02:77,6,0
chr10	48248766	.	T	TG	3069.41	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=13.964;DP=606;FS=25.934;HRun=0;HaplotypeScore=123.0888;InbreedingCoeff=0.9707;MQ=80.71;MQ0=1;MQRankSum=-13.055;QD=34.88;ReadPosRankSum=5.452;VQSLOD=1.7735;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,114,1594	0/0:10,0:10:30.10:0,30,419	0/0:30,0:24:62.36:0,62,868	0/0:28,0:24:55.90:0,56,758	1/1:4,9:13:27.09:382,27,0	0/0:14,0:14:42.12:0,42,555	0/0:16,0:16:48.12:0,48,649	0/0:27,0:27:81.26:0,81,1118	0/0:30,0:30:84.28:0,84,1174	1/1:0,6:6:18.06:265,18,0	1/1:0,11:11:30.10:425,30,0	0/0:28,0:28:81.27:0,81,1131	0/0:23,0:23:66.22:0,66,922	1/1:1,14:15:39.11:543,39,0	0/0:32,0:32:90.29:0,90,1241	0/0:32,0:32:96.32:0,96,1342	1/1:1,3:4:8.98:131,9,0	1/1:1,3:4:9.03:135,9,0	0/0:26,0:26:78.25:0,78,1076	0/0:38,0:37:99:0,111,1476	0/0:30,0:30:90.28:0,90,1241	0/0:23,0:23:66.10:0,66,860	0/0:21,0:21:57.05:0,57,747	0/0:29,0:29:87.29:0,87,1216	1/1:0,18:18:51.17:732,51,0	1/1:2,12:14:36.12:532,36,0	0/0:42,0:41:99:0,111,1528	1/1:0,3:3:9.03:133,9,0
chr10	48248959	.	G	GAGAAA	1627.70	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-5.364;DP=519;FS=2.797;HRun=0;HaplotypeScore=97.4136;InbreedingCoeff=0.9664;MQ=79.42;MQ0=0;MQRankSum=-3.921;QD=67.82;ReadPosRankSum=-4.137;VQSLOD=3.5691;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:30.10:0,30,597	0/0:4,0:4:12.04:0,12,248	0/0:20,0:20:42.40:0,42,623	0/0:24,0:22:23.58:0,24,622	0/0:23,0:23:66.19:0,66,1279	0/0:17,0:17:42.13:0,42,815	0/0:20,0:20:57.18:0,57,1122	1/1:2,21:24:66.20:1723,66,0	0/0:18,0:18:45.14:0,45,871	0/0:18,0:18:45.01:0,45,750	0/0:24,0:24:63.21:0,63,1243	0/0:13,0:13:36.12:0,36,734	0/0:21,0:21:60.19:0,60,1161	0/0:16,0:16:45.09:0,45,815	0/0:21,0:21:54.18:0,54,1076	0/0:16,0:16:45.14:0,45,881	0/0:15,0:15:45.08:0,45,800	0/0:16,0:16:42.14:0,42,869	0/0:27,0:27:74.02:0,74,1403	0/0:22,0:22:54.11:0,54,981	0/0:14,0:14:42.10:0,42,828	0/0:12,0:12:27.09:0,27,559	0/0:23,0:23:66.20:0,66,1256	0/0:20,0:20:57.18:0,57,1142	0/0:16,0:16:42.12:0,42,762	0/0:28,0:28:69.23:0,69,1363	0/0:15,0:15:45.06:0,45,775	0/0:18,0:18:54.09:0,54,892
chr10	48250721	.	G	GA	720.40	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-7.076;DP=577;FS=2.483;HRun=9;HaplotypeScore=54.5053;InbreedingCoeff=0.8700;MQ=75.20;MQ0=1;MQRankSum=1.702;QD=21.83;ReadPosRankSum=-5.017;VQSLOD=2.1606;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:22:50.01:0,50,423	0/0:8,0:8:17.99:0,18,156	0/0:22,0:21:34.93:0,35,330	0/0:12,0:11:10.89:0,11,105	0/0:35,0:35:92.94:0,93,801	0/0:16,0:16:44.97:0,45,387	0/0:11,0:11:29.96:0,30,255	1/1:7,26:33:75.18:815,75,0	0/0:17,0:17:41.99:0,42,364	0/0:24,0:24:68.99:0,69,599	0/0:24,0:24:44.50:0,45,548	0/0:11,0:11:23.99:0,24,208	0/0:18,0:18:47.99:0,48,417	0/0:18,0:18:47.97:0,48,411	0/0:25,0:25:62.96:0,63,543	0/0:26,0:26:62.95:0,63,543	0/0:23,0:23:62.96:0,63,542	0/0:23,0:23:62.98:0,63,547	0/0:21,0:21:47.98:0,48,417	0/0:31,0:32:89.02:0,89,761	0/0:10,0:10:6.42:0,6,211	0/0:24,0:24:65.97:0,66,569	0/0:20,0:20:47.99:0,48,416	0/0:11,0:12:32.03:0,32,266	0/0:17,0:16:50.99:0,51,443	0/0:22,0:22:59.99:0,60,521	0/0:41,0:40:99:0,111,956	0/0:10,0:10:26.99:0,27,234
chr10	48254002	.	C	CT	607.41	PASS	AB=0.932;AC=14;AF=0.259;AN=54;BaseQRankSum=-0.330;DP=423;FS=2.197;HRun=14;HaplotypeScore=49.1745;InbreedingCoeff=0.5596;MQ=59.62;MQ0=8;MQRankSum=-3.353;QD=3.87;ReadPosRankSum=-2.801;VQSLOD=-0.2668;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:35:25.93:0,26,231	0/1:7,1:8:8.56:9,0,66	0/1:11,0:3:0:0,0,0	0/1:7,1:4:0.01:0,0,0	0/0:16,0:17:28.47:0,28,176	0/0:13,0:13:14.67:0,15,96	0/0:11,0:10:14.70:0,15,96	0/1:29,2:29:3.21:3,0,225	0/0:13,0:14:21.59:0,22,126	0/0:16,0:16:26.35:0,26,169	0/0:21,0:22:24.10:0,24,143	0/0:13,0:13:26.42:0,26,170	0/0:12,0:12:23.47:0,23,147	0/0:9,0:9:15.11:0,15,95	0/1:10,1:11:11.70:12,0,62	0/0:11,0:12:34.52:0,35,215	0/1:21,1:21:4.03:4,0,155	0/0:24,0:24:53.05:0,53,343	1/1:11,13:25:16.48:240,16,0	1/1:8,4:12:20.83:166,21,0	1/1:2,7:9:9.88:81,10,0	./.	0/0:9,0:8:17.72:0,18,115	0/0:1,0:1:2.96:0,3,19	0/0:23,1:24:35.67:0,36,291	0/0:19,0:19:29.30:0,29,189	1/1:5,12:20:32.51:250,33,0	0/0:10,0:9:22.73:0,23,141
chr10	48259121	.	C	CAAAAA	5409.40	PASS	AB=0.838;AC=38;AF=0.679;AN=56;BaseQRankSum=7.687;DP=623;FS=3.169;HRun=13;HaplotypeScore=121.4448;InbreedingCoeff=0.7441;MQ=44.92;MQ0=22;MQRankSum=-8.829;QD=12.58;ReadPosRankSum=-8.344;VQSLOD=-0.6982;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:47:99:0,101,1404	0/0:7,0:7:17.92:0,18,190	0/0:7,0:3:1.10:0,1,3	0/1:12,0:5:2.49:32,0,2	1/1:11,4:35:24.04:364,24,0	0/0:34,0:33:62.28:0,62,902	0/0:18,0:21:47.04:0,47,544	1/1:28,1:27:46.30:419,46,0	0/0:17,0:17:32.89:0,33,447	1/1:14,0:29:50.91:648,51,0	1/1:10,11:23:17.98:274,18,0	1/1:22,0:19:35.38:288,35,0	1/1:27,0:23:29.34:230,29,0	1/1:12,0:25:1.82:6,2,0	0/0:26,0:29:34.16:0,34,736	0/0:20,0:23:49.09:0,49,590	1/1:8,11:17:14.97:225,15,0	1/1:13,0:6:11.96:116,12,0	1/1:24,0:23:52.66:533,53,0	0/1:14,0:26:16.63:241,0,17	1/1:9,0:9:14.94:134,15,0	1/1:21,0:17:20.74:174,21,0	1/1:18,0:17:14.91:86,15,0	1/1:11,0:9:3.89:30,4,0	1/1:3,1:20:21.07:477,21,0	1/1:12,2:29:57.79:882,58,0	1/1:19,0:15:17.77:177,18,0	1/1:7,0:7:3.01:72,3,0
chr10	48259153	.	A	AAG	1294.65	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-7.243;DP=541;FS=13.330;HRun=0;HaplotypeScore=96.1405;InbreedingCoeff=0.8738;MQ=62.80;MQ0=0;MQRankSum=0.781;QD=40.46;ReadPosRankSum=-3.442;VQSLOD=3.7835;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,132,1854	0/0:3,0:3:6.02:0,6,88	0/0:23,0:20:57.11:0,57,777	0/0:24,0:21:48.12:0,48,622	0/0:14,0:14:33.10:0,33,466	0/0:28,0:28:72.22:0,72,1022	0/0:19,0:19:48.15:0,48,681	1/1:4,26:32:82.13:1389,82,0	0/0:25,0:25:69.22:0,69,974	0/0:29,0:29:78.25:0,78,1104	0/0:9,0:9:27.09:0,27,392	0/0:17,0:17:48.10:0,48,651	0/0:16,0:16:48.08:0,48,634	0/0:18,0:18:36.12:0,36,523	0/0:25,0:25:63.20:0,63,894	0/0:20,0:20:57.18:0,57,809	0/0:14,0:14:30.10:0,30,439	0/0:5,0:5:12.04:0,12,170	0/0:18,0:18:51.15:0,51,693	0/0:18,0:18:48.16:0,48,702	0/0:13,0:13:33.11:0,33,482	0/0:16,0:16:48.16:0,48,701	0/0:20,0:20:54.11:0,54,712	0/0:12,0:11:24.08:0,24,350	0/0:17,0:17:33.09:0,33,432	0/0:26,0:26:75.25:0,75,1094	0/0:24,0:24:60.05:0,60,833	0/0:8,0:8:20.98:0,21,241
chr10	48259485	.	GT	G	993.92	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-4.266;DP=582;FS=2.353;HRun=13;HaplotypeScore=95.4528;InbreedingCoeff=0.8150;MQ=64.73;MQ0=7;MQRankSum=0.635;QD=10.69;ReadPosRankSum=4.584;VQSLOD=3.5008;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,1:33:64.12:0,64,717	0/0:6,0:6:15.02:0,15,146	0/0:32,1:14:0.92:0,1,124	0/0:29,0:18:17.88:0,18,139	0/0:4,0:18:31.80:0,32,181	0/0:25,2:29:6.05:0,6,475	0/0:13,0:13:21.03:0,21,204	0/0:17,0:42:64.05:0,64,339	0/0:19,0:18:41.87:0,42,369	0/0:9,0:21:34.69:0,35,189	0/0:5,0:22:23.56:0,24,129	1/1:4,14:18:35.68:255,36,0	1/1:5,16:21:29.77:219,30,0	0/0:4,0:18:22.88:0,23,118	0/0:16,0:16:14.38:0,14,262	0/0:19,1:21:1.08:0,1,186	0/0:4,0:15:19.24:0,19,92	0/0:4,0:9:8.65:0,9,49	0/0:7,0:22:43.69:0,44,226	0/0:10,0:27:23.41:0,23,138	0/0:6,0:12:17.04:0,17,89	1/1:2,16:18:40.80:290,41,0	1/1:2,11:14:16.15:150,16,0	1/1:5,17:22:7.59:247,8,0	0/0:3,0:9:14.27:0,14,72	0/0:12,0:30:49.58:0,50,285	0/0:4,0:32:51.53:0,52,273	0/0:1,0:9:8.58:0,9,45
chr10	48259921	.	CTT	C	1460.63	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=6.074;DP=336;FS=11.459;HRun=2;HaplotypeScore=45.3095;InbreedingCoeff=0.9721;MQ=74.77;MQ0=0;MQRankSum=-0.027;QD=37.45;ReadPosRankSum=1.303;VQSLOD=2.3212;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:39.13:0,39,791	0/0:6,0:6:18.06:0,18,365	0/0:7,0:7:17.99:0,18,290	0/0:6,0:6:15.05:0,15,265	0/0:16,0:16:41.96:0,42,714	0/0:23,0:23:69.24:0,69,1401	0/0:4,0:4:12.04:0,12,244	0/0:35,0:35:99:0,102,1926	0/0:8,0:8:24.07:0,24,453	0/0:11,0:11:33.10:0,33,604	0/0:16,0:16:42.14:0,42,833	0/0:7,0:7:21.07:0,21,426	0/0:10,0:10:30.03:0,30,565	0/0:11,0:11:32.98:0,33,584	0/0:14,0:14:42.13:0,42,817	0/0:17,0:17:51.13:0,51,895	0/0:14,0:14:36.12:0,36,730	0/0:14,0:14:30.09:0,30,572	1/1:0,5:5:15.05:245,15,0	1/1:1,10:11:30.05:458,30,0	1/1:0,13:13:27.09:440,27,0	0/0:11,0:11:33.11:0,33,669	0/0:7,0:7:21.07:0,21,426	0/0:7,0:7:21.07:0,21,426	0/0:12,0:12:36.12:0,36,730	0/0:18,0:18:51.03:0,51,878	1/1:0,10:10:30.10:477,30,0	0/0:8,0:8:21.07:0,21,426
chr10	48259992	.	ATATG	A	1030.99	PASS	AC=2;AF=0.037;AN=54;BaseQRankSum=2.227;DP=260;FS=15.769;HRun=0;HaplotypeScore=78.5201;InbreedingCoeff=0.4026;MQ=57.78;MQ0=3;MQRankSum=-2.894;QD=31.24;ReadPosRankSum=-3.340;VQSLOD=1.7148;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:36.10:0,36,871	0/0:5,0:5:15.04:0,15,281	0/0:17,0:9:22.22:0,22,521	0/0:3,0:2:6:0,6,56	0/0:12,0:12:7.73:0,8,72	0/0:16,0:16:39.09:0,39,910	0/0:3,0:3:8.24:0,8,162	1/1:3,30:33:89.60:1124,90,0	0/0:2,0:2:6.01:0,6,109	0/0:11,0:11:4.17:0,4,127	0/0:13,0:13:11.96:0,12,142	0/0:6,0:6:17.97:0,18,245	0/0:7,0:7:15.04:0,15,260	0/0:5,0:5:8.98:0,9,72	0/0:8,0:8:24.08:0,24,655	0/0:12,0:12:33.09:0,33,790	0/0:15,0:15:12.45:0,12,121	0/0:14,0:13:2.92:0,3,122	0/0:1,0:1:2.84:0,3,14	0/0:5,0:5:11.78:0,12,89	0/0:4,0:4:8.99:0,9,75	0/0:3,0:3:5.98:0,6,47	0/0:5,0:5:15.05:0,15,363	0/0:4,0:4:12.01:0,12,197	0/0:11,0:11:17.58:0,18,130	0/0:20,0:20:28.62:0,29,441	0/0:4,0:4:11.70:0,12,144	./.
chr10	48259998	.	GTGTGTGTGTATATA	G	2250.72	PASS	AB=0.931;AC=22;AF=0.407;AN=54;BaseQRankSum=4.294;DP=246;FS=5.284;HRun=0;HaplotypeScore=109.3888;InbreedingCoeff=0.3673;MQ=57.01;MQ0=3;MQRankSum=-2.931;QD=15.42;ReadPosRankSum=-0.061;VQSLOD=1.8201;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:20:36.94:0,37,1241	0/0:4,0:4:12.02:0,12,430	0/0:18,0:10:21.72:0,22,382	0/0:3,0:1:2.37:0,2,8	1/1:11,0:11:12.01:197,12,0	0/0:15,0:15:36.06:0,36,1399	0/0:3,0:3:9.01:0,9,297	0/1:33,0:33:99:154,0,281	0/0:2,0:2:3.01:0,3,100	1/1:11,0:11:27.08:511,27,0	1/1:12,0:12:2.97:20,3,0	0/0:4,0:4:11.97:0,12,295	0/0:5,0:5:12.02:0,12,396	1/1:5,0:5:6:73,6,0	0/0:8,0:8:24.07:0,24,680	0/0:11,0:11:27.08:0,27,962	1/1:15,0:15:11.95:141,12,0	0/1:4,10:13:57.20:192,0,57	0/0:1,0:1:3.01:0,3,33	0/1:5,0:5:35.36:51,0,35	0/1:4,0:4:16.84:17,0,41	1/1:1,0:1:3:25,3,0	0/0:5,0:5:15.05:0,15,264	0/1:4,0:4:35.62:36,0,196	1/1:9,0:9:15.02:277,15,0	1/1:18,0:18:42.43:726,42,0	0/1:4,0:4:14.80:15,0,212	./.
chr10	48260014	.	GTGTGTATATATA	G	2642.18	PASS	AB=0.979;AC=17;AF=0.327;AN=52;BaseQRankSum=5.136;DP=210;FS=13.614;HRun=0;HaplotypeScore=89.2309;InbreedingCoeff=0.5143;MQ=56.71;MQ0=6;MQRankSum=-3.513;QD=21.84;ReadPosRankSum=0.356;VQSLOD=1.4255;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:27.96:0,28,837	0/0:3,0:3:9.03:0,9,301	0/0:10,0:6:9.03:0,9,129	0/1:4,0:2:0.51:1,0,53	1/1:5,7:12:9.03:262,9,0	0/0:14,0:13:27.09:0,27,1118	0/0:2,0:2:6.02:0,6,218	0/1:26,0:26:99:124,0,151	0/0:2,0:2:6.02:0,6,122	1/1:0,11:12:29.96:693,30,0	1/1:2,10:12:3.01:54,3,0	0/0:4,0:4:11.97:0,12,274	0/0:5,0:5:12.02:0,12,398	1/1:4,0:4:6:73,6,0	0/0:6,0:6:18.03:0,18,324	0/0:9,0:9:24.07:0,24,563	1/1:1,12:13:6.02:166,6,0	0/1:14,1:14:38.22:208,0,38	0/0:1,0:1:3.01:0,3,36	0/0:2,0:2:3.01:0,3,48	0/0:1,0:1:3.01:0,3,48	./.	0/0:5,0:5:15.05:0,15,261	0/0:2,0:2:6.02:0,6,198	1/1:0,7:7:9.03:345,9,0	1/1:5,11:16:33.08:886,33,0	0/0:2,0:2:6.02:0,6,186	./.
chr10	48260018	.	GTA	G	608.96	PASS	AB=0.934;AC=18;AF=0.500;AN=36;BaseQRankSum=0.735;DP=189;FS=1.035;HRun=0;HaplotypeScore=64.2701;InbreedingCoeff=0.1176;MQ=55.21;MQ0=4;MQRankSum=-0.164;QD=4.35;ReadPosRankSum=4.661;VQSLOD=1.6089;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,8:17:17.67:189,18,0	1/1:3,0:3:6.02:70,6,0	./.	0/0:3,0:1:0.89:0,1,2	0/1:8,0:8:14.78:18,0,15	0/1:6,8:13:49.99:154,0,50	0/0:2,0:2:2.96:0,3,19	0/1:27,0:28:11.02:11,0,126	0/0:2,0:2:3.01:0,3,41	0/1:12,0:12:4.27:46,0,4	./.	0/0:2,0:5:5.74:0,6,38	0/0:4,0:4:6.02:0,6,93	0/0:2,0:2:3:0,3,29	1/1:4,0:4:3.01:35,3,0	1/1:5,2:8:8.86:84,9,0	1/1:12,0:12:2.80:13,3,0	0/1:15,0:14:5.96:6,0,45	./.	./.	./.	./.	./.	./.	1/1:7,0:7:8.44:40,8,0	0/1:12,0:12:2.09:65,0,2	./.	./.
chr10	48260026	.	A	ATGTG	894.18	PASS	AB=0.945;AC=8;AF=0.167;AN=48;BaseQRankSum=-3.375;DP=169;FS=0.899;HRun=0;HaplotypeScore=66.4208;InbreedingCoeff=-0.1397;MQ=55.95;MQ0=3;MQRankSum=-1.528;QD=11.61;ReadPosRankSum=-2.935;VQSLOD=2.0922;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:20.25:0,20,256	0/0:2,0:2:6.02:0,6,72	0/0:4,0:2:5.17:0,5,21	0/0:3,0:2:3.01:0,3,36	0/1:7,0:8:6.37:6,0,39	0/0:14,0:13:30.06:0,30,386	0/0:1,0:1:3.01:0,3,60	0/1:24,4:28:99:918,0,244	0/0:1,0:1:3.01:0,3,60	0/1:13,0:13:33.68:34,0,125	0/0:10,0:10:3.01:0,3,35	0/1:5,0:5:11.25:11,0,44	0/0:3,0:3:6.02:0,6,104	1/1:1,0:1:2.22:7,2,0	0/0:2,0:2:6.01:0,6,61	0/0:6,0:6:15.03:0,15,180	0/0:12,0:12:6:0,6,53	0/1:9,0:10:21.62:22,0,46	./.	./.	0/0:1,0:1:3:0,3,25	./.	0/0:2,0:2:6.01:0,6,74	0/0:3,0:3:9.01:0,9,119	0/0:7,0:7:8.97:0,9,70	0/1:12,0:12:9.16:9,0,125	0/0:2,0:2:6.02:0,6,77	./.
chr10	48260213	.	GGAAAAAAAAAAAAAA	G	1272.81	PASS	AB=1.000;AC=7;AF=0.130;AN=54;BaseQRankSum=8.627;DP=328;FS=19.878;HRun=0;HaplotypeScore=106.4307;InbreedingCoeff=0.3531;MQ=46.78;MQ0=42;MQRankSum=-2.856;QD=14.97;ReadPosRankSum=3.566;VQSLOD=0.7036;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:63.17:0,63,2711	./.	0/1:33,0:2:0.80:1,0,37	0/0:26,0:3:3.90:0,4,58	0/0:14,0:14:33.96:0,34,912	0/0:11,0:10:30.09:0,30,1561	0/0:15,0:12:36.10:0,36,1720	1/1:3,27:29:67.29:1317,67,0	0/0:11,0:11:30.08:0,30,1558	0/0:17,0:15:45.03:0,45,1784	0/0:5,0:5:8.91:0,9,196	0/1:11,0:11:35.03:35,0,246	0/1:9,0:9:23.68:24,0,153	0/0:2,0:2:6.02:0,6,324	0/0:6,0:6:18.05:0,18,922	0/0:2,0:2:6.02:0,6,384	0/0:15,0:15:40.29:0,40,1578	0/0:8,0:8:3.38:0,3,578	0/0:15,0:14:41.69:0,42,1670	0/0:10,0:10:24.05:0,24,867	0/0:8,0:7:21.06:0,21,1059	0/0:2,0:1:3.01:0,3,38	1/1:2,0:2:2.94:18,3,0	0/0:11,0:10:18.75:0,19,160	0/0:10,0:9:27.07:0,27,1165	0/0:15,0:12:36.06:0,36,1438	0/0:9,0:9:24.07:0,24,1263	0/0:7,0:3:0:0,0,0
chr10	48263614	.	C	CT	4764.86	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-13.654;DP=497;FS=0.381;HRun=8;HaplotypeScore=47.3882;InbreedingCoeff=0.9692;MQ=72.45;MQ0=0;MQRankSum=-0.112;QD=27.38;ReadPosRankSum=1.925;VQSLOD=5.2305;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:72.04:0,72,659	0/0:13,0:13:36.02:0,36,329	0/0:8,0:9:11.56:0,12,92	0/0:11,0:9:17.37:0,17,143	1/1:2,30:32:35.33:915,35,0	0/0:19,0:19:54.01:0,54,490	0/0:9,0:9:27.01:0,27,247	0/0:28,0:28:69.02:0,69,632	0/0:14,0:14:26.98:0,27,240	1/1:1,24:25:72.21:831,72,0	1/1:2,14:16:42.12:485,42,0	0/0:11,0:11:27.01:0,27,247	0/0:20,0:20:36:0,36,329	1/1:2,13:15:30.09:346,30,0	0/0:31,0:31:78.04:0,78,714	0/0:16,0:16:42.02:0,42,384	1/1:0,6:6:18.05:208,18,0	1/1:5,11:16:8.65:353,9,0	0/0:18,0:18:48.01:0,48,435	0/0:34,0:34:96.04:0,96,874	0/0:4,0:4:12.01:0,12,110	0/0:5,0:5:15.01:0,15,137	0/0:12,0:12:13.33:0,13,230	0/0:6,0:6:18.01:0,18,165	1/1:3,17:20:48.14:554,48,0	1/1:3,21:24:63.19:727,63,0	0/0:38,0:38:96.02:0,96,872	1/1:7,13:20:30.09:346,30,0
chr10	48264295	.	T	TA	3653.24	PASS	AB=0.926;AC=22;AF=0.393;AN=56;BaseQRankSum=-7.992;DP=504;FS=12.318;HRun=12;HaplotypeScore=62.4751;InbreedingCoeff=0.7814;MQ=69.59;MQ0=13;MQRankSum=0.665;QD=15.03;ReadPosRankSum=-2.347;VQSLOD=2.6850;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:19:46.60:0,47,326	0/0:15,0:15:38.71:0,39,279	0/1:39,2:17:6.13:6,0,98	0/0:29,1:14:3.70:0,4,25	1/1:4,18:21:35.11:471,35,0	0/0:13,0:16:35.85:0,36,230	0/0:10,0:8:20.86:0,21,151	1/1:8,21:30:38.85:500,39,0	0/0:13,0:13:29.76:0,30,219	1/1:5,17:23:50.95:481,51,0	1/1:4,12:16:17.15:326,17,0	0/0:14,0:16:36.87:0,37,251	0/0:7,0:7:17.90:0,18,131	1/1:2,9:11:24.04:233,24,0	0/0:22,0:24:49.23:0,49,340	0/1:10,1:11:5.26:5,0,129	1/1:1,22:24:57.71:565,58,0	1/1:9,10:16:4.78:192,5,0	0/0:19,0:22:46.27:0,46,319	0/0:20,0:20:44.70:0,45,328	0/0:5,0:3:5.96:0,6,44	0/0:5,0:5:11.90:0,12,86	0/0:14,0:14:38.77:0,39,284	0/0:16,0:16:44.69:0,45,323	1/1:3,9:12:0.86:155,1,0	1/1:4,19:25:56.50:514,57,0	0/0:21,0:20:47.64:0,48,347	1/1:0,7:7:21.03:204,21,0
chr10	48268906	.	C	CA	5939.03	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-14.075;DP=691;FS=0.694;HRun=6;HaplotypeScore=65.8381;InbreedingCoeff=0.9722;MQ=74.09;MQ0=1;MQRankSum=0.365;QD=31.93;ReadPosRankSum=1.234;VQSLOD=5.2521;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:61,0:61:99:0,159,1621	0/0:8,0:8:24.05:0,24,245	0/0:31,1:25:51.01:0,51,491	0/0:23,0:19:3.22:0,3,214	1/1:1,25:26:69.22:865,69,0	0/0:30,0:30:90.19:0,90,910	0/0:18,0:18:48.11:0,48,490	0/0:25,0:25:48.10:0,48,490	0/0:18,0:18:54.12:0,54,551	1/1:2,21:23:63.20:792,63,0	1/1:4,24:28:69.22:867,69,0	0/0:24,0:24:66.15:0,66,673	0/0:38,0:38:99:0,111,1122	1/1:1,22:23:63.20:793,63,0	0/0:32,0:32:78.10:0,78,783	0/0:29,0:29:75.15:0,75,757	1/1:1,18:19:51.16:642,51,0	1/1:2,15:17:36.11:451,36,0	0/0:28,0:28:69.15:0,69,704	0/0:30,0:30:84.17:0,84,849	0/0:22,0:22:54.12:0,54,551	0/0:19,0:19:51.10:0,51,514	0/0:19,0:19:48.10:0,48,490	0/0:28,0:28:75.13:0,75,754	1/1:2,17:19:36.12:453,36,0	1/1:2,23:25:69.20:851,69,0	0/0:20,0:20:54.11:0,54,544	1/1:0,6:6:18.06:226,18,0
chr10	48271474	.	GA	G	3979.39	PASS	AB=0.917;AC=19;AF=0.339;AN=56;BaseQRankSum=-3.331;DP=584;FS=6.873;HRun=11;HaplotypeScore=79.6214;InbreedingCoeff=0.8900;MQ=76.57;MQ0=0;MQRankSum=-0.925;QD=18.09;ReadPosRankSum=2.749;VQSLOD=4.7121;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,3:26:16.85:0,17,574	0/0:7,0:7:15.04:0,15,160	0/0:24,0:23:11.02:0,11,326	0/0:15,0:13:17.78:0,18,141	0/0:7,0:24:58.09:0,58,381	0/0:21,0:21:51.10:0,51,523	0/0:19,0:19:32.31:0,32,479	0/0:8,0:21:48.66:0,49,287	0/1:9,1:11:0.96:1,0,163	0/0:5,0:21:49.78:0,50,264	0/0:8,0:25:51.29:0,51,261	1/1:1,20:21:56.93:468,57,0	1/1:3,22:25:53.82:443,54,0	0/0:3,0:20:39.97:0,40,217	0/0:32,0:32:78.18:0,78,820	0/0:18,0:20:56.84:0,57,567	0/0:1,0:18:37.17:0,37,193	0/0:1,0:5:11.36:0,11,57	1/1:3,15:18:44.93:367,45,0	1/1:4,26:31:59.31:576,59,0	1/1:2,14:16:9.97:288,10,0	1/1:4,22:26:56.91:468,57,0	1/1:3,28:31:86.87:710,87,0	1/1:5,13:18:35.95:296,36,0	0/0:6,0:21:39.94:0,40,217	0/0:12,1:35:56.21:0,56,446	1/1:2,21:23:0.19:362,0,0	0/0:0,0:9:22.76:0,23,114
chr10	48271937	.	C	CTG	11640.47	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-2.316;DP=462;FS=11.224;HRun=0;HaplotypeScore=125.9504;InbreedingCoeff=0.9989;MQ=81.16;MQ0=0;MQRankSum=-6.993;QD=49.53;ReadPosRankSum=-2.488;VQSLOD=3.8759;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:42.13:0,42,598	0/0:10,0:10:27.08:0,27,378	0/0:17,0:17:48.15:0,48,663	0/0:17,0:17:42.08:0,42,567	1/1:2,11:13:33.10:580,33,0	0/0:25,0:25:63.21:0,63,926	0/0:14,0:14:33.11:0,33,484	1/1:8,24:32:84.29:1519,84,0	0/0:20,0:20:60.20:0,60,882	1/1:3,10:14:42.14:763,42,0	1/1:2,14:15:42.14:774,42,0	0/0:14,0:14:30.10:0,30,439	0/0:13,0:13:36.12:0,36,527	1/1:3,18:21:54.19:1007,54,0	0/0:19,0:19:48.12:0,48,682	0/0:23,0:23:60.20:0,60,882	1/1:4,12:16:45.13:802,45,0	1/1:3,7:10:27.09:489,27,0	1/1:1,18:19:54.19:1011,54,0	1/1:1,10:11:30.10:560,30,0	1/1:1,10:11:24.08:448,24,0	0/0:10,0:10:30.10:0,30,441	0/0:18,0:18:54.18:0,54,794	0/0:12,0:12:30.10:0,30,441	1/1:0,10:10:30.10:560,30,0	1/1:2,17:19:54.19:1009,54,0	1/1:7,26:33:87.28:1559,87,0	1/1:0,10:10:30.10:561,30,0
chr10	48273163	.	T	TA	913.19	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=-7.456;DP=607;FS=8.809;HRun=7;HaplotypeScore=55.9528;InbreedingCoeff=0.7426;MQ=64.98;MQ0=0;MQRankSum=1.205;QD=23.42;ReadPosRankSum=-4.610;VQSLOD=1.3382;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:57.09:0,57,550	0/0:12,0:12:30.04:0,30,290	0/0:6,0:6:5.98:0,6,51	0/1:4,0:4:0.39:18,0,0	0/0:26,0:26:75.12:0,75,724	0/0:25,0:25:75.12:0,75,724	0/0:13,0:13:27.01:0,27,254	1/1:6,29:35:87.18:1000,87,0	0/0:18,0:18:54.09:0,54,521	0/0:21,0:21:60.10:0,60,579	0/0:34,0:34:96.15:0,96,927	0/0:23,0:23:60.09:0,60,579	0/0:24,0:24:66.07:0,66,626	0/0:23,0:23:57.06:0,57,538	0/0:19,0:19:48.05:0,48,457	0/0:25,0:25:72.07:0,72,681	0/0:28,0:28:81.05:0,81,765	0/0:18,0:18:51.01:0,51,475	0/0:21,0:21:54.07:0,54,516	0/0:44,0:44:99:0,123,1169	0/0:12,0:12:24.03:0,24,232	0/0:20,0:20:60.10:0,60,579	0/0:22,0:22:57.08:0,57,550	0/0:10,0:10:30.05:0,30,290	0/0:30,0:30:84.12:0,84,806	0/0:30,0:30:81.11:0,81,778	0/0:37,0:37:93.11:0,93,886	0/0:4,0:4:6:0,6,58
chr10	48274663	.	C	CT	2046.52	PASS	AB=0.733;AC=17;AF=0.304;AN=56;BaseQRankSum=-7.128;DP=624;FS=14.493;HRun=12;HaplotypeScore=82.5205;InbreedingCoeff=0.6021;MQ=70.31;MQ0=1;MQRankSum=-0.004;QD=9.79;ReadPosRankSum=-1.026;VQSLOD=0.9741;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:53,1:56:65.45:0,65,734	0/0:16,0:17:35.43:0,35,250	0/0:19,0:16:10.88:0,11,102	0/1:13,0:11:0.26:0,0,39	1/1:11,10:21:12.26:114,12,0	0/1:12,1:14:22.20:22,0,146	0/0:18,0:19:43.71:0,44,308	0/0:22,0:25:46.62:0,47,325	0/0:25,0:26:55.62:0,56,394	1/1:3,13:16:11.12:260,11,0	1/1:5,20:25:47.85:424,48,0	0/0:20,2:22:21.68:0,22,318	0/0:19,1:23:35.80:0,36,265	0/1:5,21:26:1.83:296,0,2	0/0:29,0:29:65.49:0,65,477	0/0:17,0:18:40.73:0,41,287	0/1:12,21:33:30.55:381,0,31	1/1:3,4:7:9.01:88,9,0	0/0:6,0:18:21.45:0,21,64	0/0:3,0:31:52.50:0,53,155	0/0:4,0:14:20.36:0,20,59	0/0:23,0:23:41.64:0,42,302	0/0:26,0:26:50.38:0,50,360	0/0:14,1:15:6.56:0,7,206	0/1:10,13:24:39.58:183,0,40	1/1:7,14:21:39.02:362,39,0	0/0:7,0:33:46.83:0,47,136	1/1:2,5:8:11.86:102,12,0
chr10	48276439	.	CT	C	1247.09	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-0.144;DP=741;FS=5.471;HRun=1;HaplotypeScore=95.2503;InbreedingCoeff=0.9961;MQ=78.39;MQ0=0;MQRankSum=-0.457;QD=33.71;ReadPosRankSum=-3.467;VQSLOD=2.2226;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,114,1823	0/0:14,0:14:39.13:0,39,618	0/0:27,0:27:74.66:0,75,966	0/0:13,0:12:23.55:0,24,289	0/0:37,0:37:99:0,111,1754	0/0:23,0:23:69.20:0,69,1049	0/0:18,0:18:54.17:0,54,840	1/1:0,37:37:96.32:1342,96,0	0/0:32,0:32:96.33:0,96,1535	0/0:24,0:24:72.25:0,72,1152	0/0:19,0:19:57.19:0,57,911	0/0:22,0:22:66.21:0,66,1029	0/0:29,0:29:84.29:0,84,1334	0/0:27,0:27:81.26:0,81,1272	0/0:38,0:38:99:0,114,1799	0/0:28,0:28:84.28:0,84,1321	0/0:25,0:25:75.26:0,75,1192	0/0:10,0:10:27.09:0,27,420	0/0:21,0:21:63.21:0,63,985	0/0:25,0:25:75.24:0,75,1171	0/0:37,0:37:99:0,111,1748	0/0:36,0:36:99:0,108,1675	0/0:23,0:23:69.22:0,69,1077	0/0:32,0:32:96.33:0,96,1531	0/0:30,0:30:90.26:0,90,1366	0/0:31,0:31:90.30:0,90,1417	0/0:35,0:35:99:0,105,1650	0/0:10,0:10:30.03:0,30,403
chr10	48278082	.	A	AT	7076.64	PASS	AB=0.714;AC=28;AF=0.500;AN=56;BaseQRankSum=-10.761;DP=570;FS=1.560;HRun=10;HaplotypeScore=60.9365;InbreedingCoeff=0.8241;MQ=71.94;MQ0=0;MQRankSum=-1.336;QD=22.25;ReadPosRankSum=-0.025;VQSLOD=5.6536;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:40.08:0,40,427	0/1:5,1:6:14.01:14,0,105	0/0:8,0:8:20.95:0,21,168	0/0:16,0:15:10.32:0,10,113	1/1:10,27:37:59.53:827,60,0	0/0:21,0:21:50.91:0,51,416	0/0:16,0:16:35.94:0,36,296	0/0:26,0:26:59.90:0,60,491	0/0:18,1:19:3.94:0,4,239	1/1:7,23:30:66.13:683,66,0	1/1:5,13:19:38.93:398,39,0	1/1:1,15:16:38.79:415,39,0	1/1:2,24:27:44.32:649,44,0	1/1:6,20:26:46.36:483,46,0	0/0:21,0:23:43.97:0,44,350	0/0:23,0:23:62.93:0,63,517	1/1:4,20:25:29.33:500,29,0	0/1:3,9:12:22.21:197,0,22	0/0:14,1:15:9.96:0,10,288	0/0:25,1:26:27.92:0,28,435	0/0:15,0:15:38.90:0,39,316	1/1:5,17:22:32.49:547,32,0	1/1:4,15:21:23.62:421,24,0	1/1:2,17:19:48.12:512,48,0	1/1:4,22:26:54.14:576,54,0	1/1:3,18:21:51.11:536,51,0	0/0:19,0:20:15.93:0,16,273	1/1:0,11:11:30.08:320,30,0
chr10	48278251	.	AACACAC	A	432.20	PASS	AB=0.897;AC=13;AF=0.271;AN=48;BaseQRankSum=4.868;DP=448;FS=2.323;HRun=0;HaplotypeScore=108.8340;InbreedingCoeff=0.3510;MQ=61.61;MQ0=20;MQRankSum=-4.291;QD=3.23;ReadPosRankSum=-1.274;VQSLOD=1.8261;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:18:12.04:0,12,289	0/0:7,0:7:6.91:0,7,184	./.	./.	0/0:14,0:14:14.99:0,15,196	0/0:11,0:11:15.05:0,15,352	0/0:21,0:20:18.04:0,18,383	0/1:16,0:15:12.78:14,0,13	0/1:9,0:9:7.82:8,0,91	0/0:10,0:10:18.05:0,18,305	0/0:15,0:16:17.13:0,17,336	0/1:10,0:10:0.02:131,0,0	1/1:10,5:14:0.99:107,1,0	0/0:18,0:19:24:0,24,410	0/0:16,0:16:24.04:0,24,567	0/0:17,0:16:24.08:0,24,647	0/0:24,0:22:20.87:0,21,503	0/0:18,0:15:15.91:0,16,250	./.	1/1:13,0:13:3.01:42,3,0	0/0:29,0:23:2.99:0,3,23	0/1:12,5:17:16.24:53,0,16	1/1:3,4:8:2.96:37,3,0	0/1:16,10:26:1.96:93,0,2	0/0:11,0:11:11.15:0,11,237	0/0:13,0:13:18.04:0,18,365	1/1:19,0:17:1.81:83,2,0	./.
chr10	48278288	.	ACACACACACACATACACACC	A	1178.90	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=2.150;DP=610;FS=1.713;HRun=0;HaplotypeScore=256.2182;InbreedingCoeff=0.9360;MQ=55.74;MQ0=26;MQRankSum=-1.373;QD=15.31;ReadPosRankSum=-2.161;VQSLOD=2.0091;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:32:69.40:0,69,2176	0/0:7,0:7:14.08:0,14,816	0/0:36,0:13:29.66:0,30,458	0/0:30,0:6:17.73:0,18,320	0/0:19,0:19:38.90:0,39,1048	0/0:20,0:19:48.99:0,49,2573	0/0:23,0:22:46.02:0,46,1940	0/0:21,0:19:51.10:0,51,1015	0/0:14,0:14:30.08:0,30,1104	0/0:17,0:16:46.71:0,47,1505	0/0:21,0:21:48.15:0,48,2213	0/0:27,0:27:55.95:0,56,1630	0/0:26,0:25:62.56:0,63,1955	0/0:29,0:28:70.04:0,70,2837	0/0:23,0:23:56.54:0,57,2923	0/0:18,0:17:48.16:0,48,2790	0/0:31,0:29:66.70:0,67,2853	0/0:23,0:19:41.82:0,42,1808	1/1:6,0:4:9.03:139,9,0	1/1:2,19:21:7.82:296,8,0	1/1:32,0:26:16.81:472,17,0	0/0:18,0:18:36.11:0,36,1025	0/0:18,0:18:33.85:0,34,857	0/0:36,0:35:55.07:0,55,1815	0/0:19,0:19:42.14:0,42,1883	0/0:19,0:19:54.18:0,54,1348	1/1:18,0:16:13.75:418,14,0	0/0:4,0:4:12.04:0,12,591
chr10	48278290	.	ACACACACACATACACACC	A	1094.74	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=2.993;DP=610;FS=2.837;HRun=0;HaplotypeScore=238.7428;InbreedingCoeff=0.9419;MQ=55.73;MQ0=27;MQRankSum=-2.349;QD=14.79;ReadPosRankSum=-1.611;VQSLOD=2.3143;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:33:66.08:0,66,1880	0/0:7,0:7:13.60:0,14,763	0/0:36,0:13:29.59:0,30,459	0/0:31,0:6:17.99:0,18,285	0/0:18,0:18:38.90:0,39,982	0/0:21,0:20:48.99:0,49,2339	0/0:24,0:23:48.45:0,48,1836	0/0:22,0:20:54.07:0,54,1011	0/0:14,0:14:27.09:0,27,987	0/0:18,0:17:49.05:0,49,1434	0/0:21,0:21:45.15:0,45,1935	0/0:27,0:27:55.91:0,56,1388	0/0:27,0:26:62.02:0,62,1734	0/0:28,0:27:70.04:0,70,2576	0/0:23,0:23:56.54:0,57,2659	0/0:18,0:17:48.16:0,48,2551	0/0:30,0:28:66.68:0,67,2589	0/0:22,0:18:41.13:0,41,1620	1/1:6,0:4:12.04:177,12,0	1/1:20,0:20:7.82:210,8,0	1/1:29,0:24:28.54:418,29,0	0/0:18,0:18:38.47:0,38,938	0/0:18,0:18:30.87:0,31,757	0/0:36,0:35:55.07:0,55,1574	0/0:19,0:19:42.09:0,42,1713	0/0:19,0:19:51.15:0,51,1161	1/1:5,13:16:11.28:438,11,0	0/0:4,0:4:12.04:0,12,517
chr10	48278295	.	CACACAT	C	501.89	PASS	AB=0.968;AC=12;AF=0.214;AN=56;BaseQRankSum=8.291;DP=614;FS=24.182;HRun=0;HaplotypeScore=137.5785;InbreedingCoeff=0.4962;MQ=56.84;MQ0=25;MQRankSum=-3.688;QD=2.82;ReadPosRankSum=-0.761;VQSLOD=0.8705;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:32:65.62:0,66,741	0/0:7,0:7:12.50:0,12,302	0/0:40,0:16:39.76:0,40,337	0/0:38,0:11:20.27:0,20,217	0/0:19,0:19:31.46:0,31,319	0/0:20,0:19:45.31:0,45,716	0/0:25,0:24:46.89:0,47,676	0/0:20,0:18:29.82:0,30,331	0/0:16,0:16:30.64:0,31,368	0/0:20,0:19:29.60:0,30,452	0/0:20,0:20:38.36:0,38,532	0/1:23,4:27:97.03:97,0,260	0/1:24,0:24:30.39:30,0,324	0/0:27,0:26:58.63:0,59,710	0/0:25,0:25:59.62:0,60,952	0/0:18,0:17:47.07:0,47,968	0/0:29,0:27:54.81:0,55,941	0/0:20,0:17:29.60:0,30,464	1/1:7,0:5:14.90:112,15,0	1/1:19,0:19:8.78:77,9,0	1/1:29,0:23:26.79:215,27,0	0/1:19,0:19:14.16:14,0,226	0/0:17,1:18:1.30:0,1,190	0/1:36,0:35:29.26:29,0,277	0/0:19,0:19:34.94:0,35,554	0/0:17,0:17:25.48:0,25,456	1/1:17,0:15:7.80:92,8,0	0/0:4,0:4:11.54:0,12,73
chr10	48278299	.	CAT	C	291.54	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=8.226;DP=612;FS=36.604;HRun=0;HaplotypeScore=104.0759;InbreedingCoeff=0.4668;MQ=58.82;MQ0=23;MQRankSum=-1.776;QD=2.58;ReadPosRankSum=-1.765;VQSLOD=0.3664;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,2:35:29.15:0,29,580	0/0:7,0:7:11.97:0,12,160	0/0:44,0:20:49.74:0,50,464	0/0:40,0:13:22.33:0,22,251	0/0:18,0:18:16.92:0,17,272	0/0:20,0:20:42.09:0,42,364	0/0:25,0:24:32.29:0,32,448	0/0:21,0:19:35.64:0,36,377	0/0:16,0:16:27.60:0,28,213	0/0:20,0:19:1.12:0,1,286	0/0:19,0:19:33.31:0,33,333	0/1:26,0:26:7.55:8,0,282	0/0:24,0:24:33.83:0,34,359	0/0:27,0:26:18.55:0,19,432	0/0:24,0:24:61.96:0,62,638	0/1:18,0:17:7.47:7,0,484	0/0:25,1:25:43.21:0,43,615	0/0:15,4:16:0.34:0,0,212	1/1:7,0:5:14.90:112,15,0	1/1:19,0:19:8.74:50,9,0	1/1:27,0:22:29.92:240,30,0	0/0:20,0:20:25.42:0,25,277	0/0:18,0:18:1.21:0,1,190	0/0:35,0:34:42.32:0,42,344	0/0:18,0:18:29.79:0,30,341	0/0:16,0:16:0.34:0,0,285	0/1:16,0:14:5.70:20,0,6	0/0:4,0:4:11.54:0,12,73
chr10	48281633	.	CTTTTGTTTTGTTTTG	C	11541.10	PASS	AB=0.700;AC=28;AF=0.500;AN=56;BaseQRankSum=11.780;DP=594;FS=0.000;HRun=0;HaplotypeScore=255.8022;InbreedingCoeff=0.6456;MQ=71.89;MQ0=4;MQRankSum=-10.089;QD=34.76;ReadPosRankSum=5.274;VQSLOD=3.6766;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:57.20:0,57,3713	0/0:9,0:9:24.08:0,24,1556	0/0:36,0:25:6.02:0,6,176	0/0:41,0:25:6.90:0,7,251	1/1:6,20:26:31.61:1162,32,0	0/0:16,0:16:36.12:0,36,2573	0/0:15,0:15:33.11:0,33,2040	0/0:33,0:32:48.16:0,48,2666	0/0:22,0:23:51.15:0,51,2822	1/1:15,15:30:42.13:1634,42,0	1/1:11,6:17:6.02:250,6,0	0/1:12,0:26:19.82:20,0,216	0/1:12,0:20:6.02:6,0,223	1/1:13,7:20:18.06:750,18,0	0/0:21,0:21:48.16:0,48,3175	0/0:9,0:19:42.14:0,42,1273	1/1:20,6:26:11.12:619,11,0	1/1:7,1:8:6.02:235,6,0	1/1:17,5:22:11.08:514,11,0	1/1:9,14:23:39.13:1625,39,0	0/0:11,0:11:2.04:0,2,6	0/0:8,0:14:9.72:0,10,355	0/1:10,0:17:5.20:5,0,138	0/1:10,1:16:76.60:123,0,77	1/1:8,5:15:21.07:835,21,0	1/1:12,17:30:51.13:1908,51,0	1/1:8,11:20:30.10:1230,30,0	1/1:10,6:16:15.05:625,15,0
chr10	48283693	.	AC	A	1302.77	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=1.957;DP=699;FS=7.897;HRun=1;HaplotypeScore=88.4003;InbreedingCoeff=0.9998;MQ=83.69;MQ0=0;MQRankSum=-0.416;QD=36.19;ReadPosRankSum=-4.211;VQSLOD=1.6684;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,138,2110	0/0:16,0:16:48.16:0,48,767	0/0:19,0:19:54.16:0,54,818	0/0:22,0:22:62.58:0,63,958	0/0:29,0:29:81.18:0,81,1199	0/0:27,0:27:81.26:0,81,1265	0/0:24,0:24:72.23:0,72,1128	1/1:0,36:36:99:1398,105,0	0/0:17,0:17:51.15:0,51,790	0/0:26,0:26:72.21:0,72,1053	0/0:16,0:16:42.12:0,42,641	0/0:32,0:32:96.33:0,96,1532	0/0:29,0:29:87.30:0,87,1386	0/0:27,0:27:81.28:0,81,1293	0/0:40,0:40:99:0,120,1918	0/0:23,0:23:69.24:0,69,1100	0/0:22,0:21:63.21:0,63,1007	0/0:18,0:18:51.17:0,51,815	0/0:21,0:21:60.20:0,60,957	0/0:25,0:25:66.18:0,66,985	0/0:23,0:23:66.22:0,66,1054	0/0:22,0:22:63.16:0,63,915	0/0:29,0:29:84.27:0,84,1299	0/0:19,0:19:57.19:0,57,903	0/0:26,0:26:75.23:0,75,1150	0/0:24,0:24:66.21:0,66,1011	0/0:28,0:28:84.24:0,84,1268	0/0:12,0:12:36.12:0,36,566
chr10	48285543	.	T	TA	834.94	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-7.758;DP=611;FS=4.806;HRun=8;HaplotypeScore=58.3831;InbreedingCoeff=0.9570;MQ=80.98;MQ0=0;MQRankSum=-1.515;QD=23.19;ReadPosRankSum=-4.790;VQSLOD=2.1002;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:63.03:0,63,577	0/0:11,0:11:33.02:0,33,302	0/0:13,0:13:29.60:0,30,254	0/0:16,0:18:18.56:0,19,146	0/0:23,0:23:60.01:0,60,545	0/0:17,0:17:45.01:0,45,407	0/0:14,0:14:33.01:0,33,302	1/1:9,27:35:81.24:930,81,0	0/0:16,0:16:39.01:0,39,357	0/0:31,0:31:84.04:0,84,769	0/0:21,0:21:60.03:0,60,549	0/0:25,0:25:60.03:0,60,549	0/0:24,0:24:66.02:0,66,599	0/0:21,0:21:63.03:0,63,577	0/0:27,0:27:72.02:0,72,654	0/0:22,0:22:56.99:0,57,512	0/0:20,0:20:57.03:0,57,522	0/0:26,0:26:69:0,69,625	0/0:30,0:30:72.01:0,72,656	0/0:47,0:47:99:0,129,1181	0/0:16,0:16:45.02:0,45,412	0/0:18,0:19:53.06:0,53,473	0/0:20,0:20:53.99:0,54,487	0/0:14,0:14:42.02:0,42,384	0/0:19,0:19:19.55:0,20,432	0/0:24,0:24:66.03:0,66,604	0/0:30,0:30:84.04:0,84,769	0/0:4,0:4:12.01:0,12,110
chr10	48290953	.	T	TA	2549.60	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-0.649;DP=652;FS=4.626;HRun=8;HaplotypeScore=67.5919;InbreedingCoeff=0.9798;MQ=68.70;MQ0=1;MQRankSum=0.785;QD=26.28;ReadPosRankSum=-0.710;VQSLOD=4.2124;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:52.33:0,52,625	0/0:10,0:10:27.01:0,27,247	0/0:34,0:14:9.42:0,9,175	0/0:25,0:17:24.98:0,25,230	0/0:30,0:30:72.01:0,72,653	0/0:20,0:20:54.02:0,54,494	0/0:19,0:19:54.01:0,54,488	0/0:29,0:29:81.03:0,81,738	0/0:18,0:19:56.07:0,56,500	0/0:28,0:28:67.17:0,67,651	0/0:21,0:21:63.03:0,63,576	0/0:25,0:25:69.02:0,69,627	0/0:24,0:24:40.27:0,40,405	0/0:21,0:21:57.02:0,57,522	0/0:30,0:30:75.01:0,75,681	0/0:29,0:29:84.04:0,84,769	0/0:28,0:28:77.97:0,78,691	0/0:17,0:17:45.02:0,45,412	1/1:4,19:23:33.99:631,34,0	1/1:2,18:21:56.97:624,57,0	1/1:1,9:10:18.05:208,18,0	0/0:22,0:22:63.03:0,63,576	0/0:16,0:16:39.02:0,39,357	0/0:15,0:15:36.02:0,36,329	0/0:29,0:29:81.02:0,81,737	0/0:28,0:28:75.04:0,75,686	1/1:2,41:42:99:1246,108,0	0/0:9,0:9:17.95:0,18,152
chr10	48291372	.	C	CT	1844.04	PASS	AB=0.762;AC=18;AF=0.321;AN=56;BaseQRankSum=9.994;DP=473;FS=0.863;HRun=11;HaplotypeScore=66.9068;InbreedingCoeff=0.6842;MQ=83.42;MQ0=0;MQRankSum=-0.970;QD=9.71;ReadPosRankSum=2.341;VQSLOD=2.8058;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:65.69:0,66,511	0/0:3,0:4:8.01:0,8,52	0/0:20,0:21:9.48:0,9,88	0/0:20,0:14:20.29:0,20,112	0/0:21,0:21:56.77:0,57,441	0/0:18,0:18:47.82:0,48,371	0/0:11,0:11:29.87:0,30,232	0/1:28,0:27:0.11:92,0,0	0/0:11,0:11:26.88:0,27,208	0/1:23,4:27:28.61:29,0,354	0/0:19,0:19:50.80:0,51,395	1/1:17,0:17:40.24:165,40,0	1/1:14,0:14:29.53:122,30,0	0/0:10,0:10:26.49:0,26,194	0/0:10,0:11:28.93:0,29,215	0/0:15,1:17:19.42:0,19,323	0/0:26,0:27:70.75:0,71,539	0/0:15,1:16:13.44:0,13,277	0/1:4,13:18:1.58:320,0,2	1/1:2,20:23:50.85:478,51,0	0/1:3,5:8:25.43:131,0,25	1/1:10,0:10:24.11:99,24,0	1/1:6,0:6:16.07:66,16,0	1/1:19,0:19:42.85:175,43,0	0/0:21,0:23:60.83:0,61,452	0/0:18,1:19:3.58:0,4,206	1/1:7,11:19:6.20:363,6,0	0/0:3,0:4:11:0,11,75
chr10	48291380	.	T	TTG	3041.76	PASS	AB=0.547;AC=11;AF=0.196;AN=56;BaseQRankSum=-7.749;DP=500;FS=5.967;HRun=0;HaplotypeScore=74.5528;InbreedingCoeff=0.8620;MQ=81.22;MQ0=0;MQRankSum=-1.680;QD=29.53;ReadPosRankSum=5.010;VQSLOD=5.2904;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:96.13:0,96,1176	0/0:3,0:3:9.01:0,9,108	0/0:22,0:21:22.30:0,22,270	0/0:20,0:14:15.33:0,15,277	0/0:23,0:23:69.16:0,69,908	0/0:17,0:17:51.16:0,51,707	0/0:14,0:14:42.11:0,42,531	0/1:5,0:27:27.77:348,0,28	0/0:12,0:12:36.02:0,36,452	0/0:26,0:26:77.21:0,77,925	0/0:20,0:20:60.16:0,60,799	1/1:1,19:21:45.15:761,45,0	1/1:2,14:17:33.08:537,33,0	0/0:12,0:12:36.08:0,36,456	0/0:13,0:13:39.08:0,39,487	0/0:19,0:19:53.82:0,54,700	0/0:29,0:29:82.41:0,82,1071	0/0:19,0:18:53.78:0,54,659	0/0:17,0:17:28.25:0,28,229	0/0:22,0:22:40.31:0,40,234	0/0:7,0:7:19.41:0,19,142	1/1:2,9:11:27.07:457,27,0	1/1:0,7:7:18.06:305,18,0	1/1:0,18:17:48.16:812,48,0	0/0:26,0:26:78.12:0,78,978	0/0:21,0:21:62.33:0,62,670	0/0:19,0:19:26.66:0,27,246	0/0:4,0:4:12.02:0,12,149
chr10	48292385	.	GCAGAGGGGCTGC	G	13797.45	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=16.068;DP=651;FS=0.360;HRun=0;HaplotypeScore=227.2017;InbreedingCoeff=0.9894;MQ=87.83;MQ0=0;MQRankSum=-15.375;QD=71.86;ReadPosRankSum=3.498;VQSLOD=4.6156;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:90.29:0,90,4444	0/0:12,0:12:36.12:0,36,1842	0/0:29,0:29:84.24:0,84,3720	0/0:23,0:23:66.16:0,66,2737	1/1:4,16:20:30.10:1016,30,0	0/0:19,0:19:54.19:0,54,3234	0/0:37,0:37:99:0,107,5881	0/0:42,0:42:99:0,108,5741	0/0:28,0:28:81.28:0,81,4758	1/1:5,24:29:69.21:2191,69,0	1/1:4,17:21:42.14:1541,42,0	0/0:16,0:16:48.16:0,48,2862	0/0:32,0:32:96.33:0,96,5774	1/1:4,30:34:87.30:3242,87,0	0/0:34,0:34:93.32:0,93,5551	0/0:24,0:24:72.25:0,72,4200	1/1:5,16:21:30.10:1053,30,0	1/1:2,13:15:18.06:561,18,0	0/0:18,0:18:51.17:0,51,2614	0/0:20,0:20:54.19:0,54,3000	0/0:22,0:22:66.23:0,66,3853	0/0:15,0:15:39.13:0,39,2099	0/0:13,0:13:39.13:0,39,1931	0/0:27,0:27:75.26:0,75,4332	1/1:1,22:23:57.20:2095,57,0	1/1:5,18:23:54.18:1759,54,0	0/0:17,0:17:51.17:0,51,2933	1/1:3,3:6:9.03:338,9,0
chr10	48293154	.	GA	G	1894.02	PASS	AB=0.731;AC=18;AF=0.321;AN=56;BaseQRankSum=2.767;DP=614;FS=3.839;HRun=13;HaplotypeScore=82.4132;InbreedingCoeff=0.3907;MQ=76.89;MQ0=1;MQRankSum=-3.058;QD=7.31;ReadPosRankSum=3.043;VQSLOD=2.9929;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,1:22:37.85:0,38,486	0/1:9,1:10:0.89:1,0,148	0/1:31,1:24:9.95:10,0,185	0/0:19,0:17:17.47:0,17,102	1/1:5,17:24:31.19:334,31,0	0/0:19,1:22:23:0,23,371	0/0:24,1:25:40.92:0,41,506	0/0:10,0:32:75.41:0,75,468	0/0:17,0:17:22.16:0,22,341	1/1:4,17:21:24.09:321,24,0	0/1:5,10:16:0.32:152,0,0	0/0:20,3:24:0.35:0,0,343	0/0:27,1:29:48.20:0,48,582	0/1:8,16:24:13.67:237,0,14	0/0:25,3:31:55.68:0,56,635	0/1:16,6:23:56.79:57,0,285	1/1:6,16:25:46.71:334,47,0	1/1:5,12:20:18.37:197,18,0	0/0:19,0:19:40.13:0,40,299	0/0:25,0:27:53.50:0,54,368	0/0:12,0:14:29.21:0,29,185	0/1:11,4:16:38.10:38,0,156	0/0:24,0:24:17.89:0,18,461	0/0:24,3:27:19.28:0,19,501	0/1:5,14:20:21.58:149,0,22	1/1:3,10:16:21.04:181,21,0	0/0:21,1:22:11.38:0,11,239	0/1:5,6:11:66.54:67,0,67
chr10	48293904	.	C	CTTAT	20331.85	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-7.309;DP=651;FS=1.973;HRun=0;HaplotypeScore=103.8452;InbreedingCoeff=0.9911;MQ=70.73;MQ0=0;MQRankSum=-6.347;QD=47.50;ReadPosRankSum=-0.515;VQSLOD=5.2866;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:45.13:0,45,764	0/0:7,0:7:15.05:0,15,263	0/0:21,0:21:40.80:0,41,643	0/0:25,0:23:35.29:0,35,629	1/1:3,14:19:49.32:1004,49,0	0/0:31,0:31:93.23:0,93,1606	0/0:25,0:25:66.21:0,66,1138	1/1:10,19:31:69.18:1601,69,0	0/0:31,0:31:84.29:0,84,1471	1/1:3,27:30:81.26:1878,81,0	1/1:2,21:23:48.08:945,48,0	1/1:4,13:18:36.12:901,36,0	1/1:5,27:34:63.15:1536,63,0	1/1:2,24:26:54.10:1320,54,0	0/0:28,0:27:72.22:0,72,1210	0/0:31,0:31:72.22:0,72,1215	1/1:5,21:26:48.16:1225,48,0	1/1:7,10:17:41.03:890,41,0	1/1:3,14:17:48.14:1084,48,0	1/1:8,29:37:75.03:1423,75,0	1/1:2,6:8:11.97:169,12,0	1/1:4,16:22:44.96:967,45,0	1/1:5,17:23:29.82:497,30,0	1/1:2,18:20:42.14:1035,42,0	1/1:4,20:25:48.10:1173,48,0	1/1:4,20:24:66.21:1524,66,0	1/1:4,11:16:29.57:708,30,0	1/1:2,7:9:18.06:454,18,0
chr10	48294952	.	G	GT	12696.28	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-4.495;DP=638;FS=9.187;HRun=1;HaplotypeScore=68.4743;InbreedingCoeff=0.9917;MQ=73.41;MQ0=0;MQRankSum=-3.220;QD=40.43;ReadPosRankSum=4.073;VQSLOD=5.1667;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,108,1398	0/0:3,0:3:9.03:0,9,117	0/0:31,0:31:90.27:0,90,1131	0/0:27,0:27:54.49:0,54,884	1/1:2,22:24:63.08:860,63,0	0/0:19,0:19:57.19:0,57,740	0/0:16,0:16:45.15:0,45,584	0/0:31,0:31:90.28:0,90,1156	0/0:15,0:15:45.15:0,45,583	1/1:0,23:23:69.23:1030,69,0	1/1:0,20:20:57.19:854,57,0	0/0:12,0:12:30.10:0,30,389	0/0:16,0:16:48.16:0,48,619	1/1:2,21:23:63.21:944,63,0	0/0:30,0:30:90.29:0,90,1168	0/0:22,0:22:66.21:0,66,857	1/1:3,31:34:87.29:1304,87,0	1/1:0,21:21:57.19:854,57,0	1/1:1,18:19:54.18:806,54,0	1/1:1,27:28:75.25:1121,75,0	1/1:1,37:38:99:1664,111,0	0/0:21,0:21:63.20:0,63,815	0/0:20,0:20:60.17:0,60,763	0/0:23,0:23:69.20:0,69,878	1/1:1,23:24:66.22:989,66,0	1/1:0,18:18:54.16:786,54,0	1/1:2,32:34:74.97:1124,75,0	1/1:0,8:8:24.08:360,24,0
chr10	48295690	.	CTCTG	C	11324.65	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=17.534;DP=635;FS=11.947;HRun=0;HaplotypeScore=138.6267;InbreedingCoeff=0.9854;MQ=79.74;MQ0=0;MQRankSum=-9.986;QD=44.06;ReadPosRankSum=4.028;VQSLOD=4.8698;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,117,3108	0/0:13,0:13:39.13:0,39,1028	0/0:25,0:24:59.73:0,60,1611	0/0:14,0:14:39.13:0,39,989	1/1:1,32:33:53.93:970,54,0	0/0:14,0:14:39.13:0,39,1026	0/0:25,0:25:72.25:0,72,1919	0/0:40,0:40:99:0,111,2876	0/0:17,0:17:48.16:0,48,1280	1/1:1,26:27:78.25:1423,78,0	1/1:2,19:21:48.16:895,48,0	0/0:29,0:29:87.30:0,87,2312	0/0:24,0:24:66.23:0,66,1746	1/1:0,22:22:66.23:1232,66,0	0/0:29,0:29:84.29:0,84,2232	0/0:33,0:33:96.33:0,96,2560	1/1:2,19:21:51.17:952,51,0	1/1:1,14:15:39.09:674,39,0	1/1:1,13:14:39.11:666,39,0	1/1:2,18:20:42.14:783,42,0	1/1:1,18:19:27.05:503,27,0	0/0:17,0:17:45.15:0,45,1185	0/0:22,0:22:63.22:0,63,1617	0/0:32,0:32:93.32:0,93,2478	1/1:1,19:20:51.17:948,51,0	1/1:1,23:24:69.24:1288,69,0	1/1:1,18:19:48.16:878,48,0	1/1:0,2:2:6.02:112,6,0
chr10	48296268	.	TA	T	2289.40	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=8.834;DP=629;FS=0.399;HRun=10;HaplotypeScore=94.6824;InbreedingCoeff=0.9756;MQ=71.81;MQ0=1;MQRankSum=0.319;QD=19.08;ReadPosRankSum=-0.260;VQSLOD=3.7719;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,1:23:25.59:0,26,580	0/0:11,0:11:29.97:0,30,296	0/0:20,0:15:30.01:0,30,309	0/0:14,0:12:20.66:0,21,185	0/0:30,0:30:76.05:0,76,446	0/0:28,0:28:78.20:0,78,854	0/0:12,0:12:33.09:0,33,365	0/0:43,0:43:99:0,100,538	0/0:20,0:20:54.01:0,54,579	0/0:22,0:22:56.76:0,57,281	0/0:13,0:13:8.80:0,9,125	0/0:19,0:19:43.56:0,44,245	0/0:21,2:23:26.69:0,27,268	0/0:24,0:24:55.20:0,55,305	0/0:28,0:28:72.18:0,72,786	0/0:28,0:28:75.19:0,75,815	0/0:19,0:19:49.78:0,50,303	0/0:14,0:14:32.02:0,32,184	1/1:6,20:26:62.89:530,63,0	1/1:4,28:32:84.41:723,84,0	1/1:4,11:15:29.99:260,30,0	0/0:14,0:14:32:0,32,185	0/0:21,0:21:46.80:0,47,286	0/0:14,0:14:17.28:0,17,170	0/0:32,0:32:75.28:0,75,418	0/0:30,0:30:61.16:0,61,403	1/1:7,40:47:99:937,108,0	0/0:7,0:7:17.60:0,18,104
chr10	48297037	.	A	ATTACAACAGG	41405.14	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=4.547;DP=737;FS=0.000;HRun=0;HaplotypeScore=233.8876;InbreedingCoeff=0.9963;MQ=72.19;MQ0=0;MQRankSum=-19.632;QD=118.98;ReadPosRankSum=-2.113;VQSLOD=4.5350;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:57.20:0,57,1814	0/0:14,0:14:42.12:0,42,1285	0/0:21,0:21:57.20:0,57,1753	0/0:15,0:15:39.09:0,39,1174	1/1:15,26:41:99:4316,108,0	0/0:29,0:29:78.25:0,78,2469	0/0:18,0:18:54.17:0,54,1627	0/0:56,0:56:99:0,163,5115	0/0:19,0:19:54.19:0,54,1780	1/1:18,20:38:93.29:3912,93,0	1/1:12,17:29:84.28:3663,84,0	0/0:25,0:25:69.24:0,69,2221	0/0:39,0:39:99:0,114,3524	1/1:14,16:30:90.31:4077,90,0	0/0:31,0:31:93.32:0,93,2962	0/0:36,0:36:96.33:0,96,2967	1/1:4,5:9:18.53:805,19,0	1/1:5,1:6:15.05:546,15,0	1/1:6,9:17:51.17:2138,51,0	1/1:12,21:33:96.32:4426,96,0	1/1:8,3:11:21.07:757,21,0	0/0:23,0:23:69.22:0,69,2136	0/0:27,0:27:78.27:0,78,2397	0/0:15,0:15:42.10:0,42,1282	1/1:15,13:29:81.26:3168,81,0	1/1:13,20:33:90.30:4180,90,0	1/1:20,30:52:99:6996,153,0	1/1:7,12:19:48.16:2422,48,0
chr10	48297085	.	G	GT	13742.77	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=21.174;DP=778;FS=5.090;HRun=0;HaplotypeScore=144.3115;InbreedingCoeff=0.9996;MQ=82.72;MQ0=0;MQRankSum=-12.807;QD=41.77;ReadPosRankSum=3.768;VQSLOD=3.9506;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:96.24:0,96,1282	0/0:12,0:12:36.12:0,36,503	0/0:27,0:27:78.22:0,78,1027	0/0:36,0:36:95.67:0,96,1289	1/1:0,32:32:78.26:1188,78,0	0/0:31,0:31:87.21:0,87,1159	0/0:23,0:23:69.22:0,69,946	0/0:35,0:35:99:0,102,1412	0/0:26,0:26:78.24:0,78,1058	1/1:1,27:28:81.28:1286,81,0	1/1:1,26:27:69.23:1090,69,0	0/0:31,0:31:93.31:0,93,1299	0/0:41,0:41:99:0,123,1701	1/1:0,25:25:69.17:1059,69,0	0/0:42,0:42:99:0,123,1679	0/0:37,0:37:99:0,111,1535	1/1:0,9:9:24.08:382,24,0	1/1:0,10:10:30.10:478,30,0	1/1:4,9:13:33.10:493,33,0	1/1:3,33:36:93.25:1413,93,0	1/1:1,27:28:69.24:1101,69,0	0/0:24,0:24:72.24:0,72,1006	0/0:31,0:31:93.27:0,93,1263	0/0:21,0:21:54.17:0,54,740	1/1:0,29:29:87.30:1368,87,0	1/1:0,32:32:93.30:1461,93,0	1/1:2,45:47:99:1908,126,0	1/1:2,11:13:33.11:516,33,0
chr10	48299371	.	ATACCTGTGCCCCCTACCTGTGTTCC	A	4653.36	PASS	AB=1.000;AC=13;AF=0.250;AN=52;BaseQRankSum=2.196;DP=628;FS=6.950;HRun=0;HaplotypeScore=377.9166;InbreedingCoeff=0.8654;MQ=79.68;MQ0=3;MQRankSum=-5.671;QD=37.83;ReadPosRankSum=2.434;VQSLOD=2.2111;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:78.27:0,78,2607	0/0:7,0:7:15.05:0,15,535	0/0:37,0:35:54.14:0,54,1463	0/0:30,0:25:27.05:0,27,843	1/1:16,0:16:9.03:294,9,0	0/0:21,0:20:33.11:0,33,951	0/0:33,0:32:75.26:0,75,2439	0/0:23,0:21:33.11:0,33,999	0/0:28,0:28:57.17:0,57,1924	1/1:11,0:11:15.05:543,15,0	./.	0/0:28,0:28:60.14:0,60,2167	0/0:31,0:28:54.07:0,54,1641	1/1:20,4:24:24.08:1243,24,0	0/0:26,0:26:57.20:0,57,2099	0/0:20,0:20:39.12:0,39,1372	1/1:20,0:19:19.22:810,19,0	1/1:13,0:13:11.98:288,12,0	0/0:15,0:14:24.07:0,24,626	0/0:19,0:19:36.12:0,36,1263	0/0:50,0:50:99:0,108,3858	0/0:25,0:25:39.13:0,39,1243	0/0:16,0:16:27.09:0,27,846	0/0:17,0:16:17.23:0,17,679	0/1:19,0:19:93.56:621,0,94	1/1:8,12:20:15.86:854,16,0	0/0:26,0:26:63.22:0,63,2346	./.
chr10	48299392	.	G	GC	1046.89	PASS	AB=0.811;AC=7;AF=0.135;AN=52;BaseQRankSum=8.359;DP=615;FS=17.123;HRun=0;HaplotypeScore=97.6135;InbreedingCoeff=-0.1313;MQ=52.37;MQ0=52;MQRankSum=-5.550;QD=9.35;ReadPosRankSum=-0.454;VQSLOD=2.6883;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:28:78.26:0,78,1077	0/0:6,0:6:18.06:0,18,252	0/0:34,0:19:54.04:0,54,695	0/0:25,0:10:30.08:0,30,391	0/1:5,4:8:10.76:112,0,11	0/0:20,0:17:35.97:0,36,452	0/0:45,0:37:93.31:0,93,1286	0/0:17,0:12:36.08:0,36,481	0/0:26,0:25:60.43:0,60,787	0/1:9,4:12:99:136,0,182	./.	0/0:34,0:30:69.23:0,69,957	0/0:41,0:33:57.60:0,58,756	0/1:17,4:12:32.77:200,0,33	0/0:23,0:22:59.78:0,60,838	0/0:18,0:18:51.11:0,51,674	0/1:18,7:22:54.15:266,0,54	0/1:12,2:10:97.35:104,0,97	0/0:16,0:11:27.08:0,27,362	0/0:18,0:17:39.04:0,39,544	0/0:57,0:51:99:0,117,1572	0/0:17,0:17:42.14:0,42,586	0/0:15,0:15:33.10:0,33,446	0/0:31,1:22:35.92:0,36,477	0/1:8,5:13:96.67:172,0,97	0/1:17,0:16:23.35:185,0,23	0/0:24,0:23:69.22:0,69,940	./.
chr10	48299394	.	TCCTACCTGTGCCC	T	1264.81	PASS	AB=0.973;AC=9;AF=0.180;AN=50;BaseQRankSum=6.483;DP=630;FS=2.046;HRun=0;HaplotypeScore=203.0629;InbreedingCoeff=-0.0753;MQ=48.63;MQ0=57;MQRankSum=-5.740;QD=7.76;ReadPosRankSum=-1.084;VQSLOD=2.7504;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:28:24.08:0,24,881	0/0:6,0:6:6.02:0,6,169	0/0:31,0:16:2.98:0,3,21	./.	0/0:10,0:9:2.67:0,3,86	0/0:21,0:18:21.07:0,21,700	0/0:46,0:38:60.20:0,60,1876	0/1:16,0:11:38.96:39,0,51	0/0:29,0:28:34.35:0,34,1378	0/1:15,0:13:78.41:78,0,369	./.	0/1:35,1:31:85.71:86,0,1812	0/0:42,0:33:26.44:0,26,751	0/1:23,0:13:99:412,0,109	0/0:23,0:22:33.10:0,33,1509	0/0:19,0:19:48.16:0,48,1858	0/1:22,3:21:83.91:368,0,84	1/1:13,0:8:3.01:50,3,0	0/0:16,0:11:10.25:0,10,143	0/0:18,0:17:21.07:0,21,590	0/0:57,2:51:66.82:0,67,2296	0/0:18,0:18:12.04:0,12,527	0/0:14,0:14:12.04:0,12,480	0/0:32,0:21:11.97:0,12,218	0/1:17,0:17:74.68:88,0,75	0/1:17,1:17:99:276,0,128	0/0:23,0:22:38.42:0,38,1354	./.
chr10	48299432	.	TCCTACCTGTGCCC	T	1248.38	PASS	AB=0.964;AC=14;AF=0.259;AN=54;BaseQRankSum=4.117;DP=571;FS=14.858;HRun=0;HaplotypeScore=133.4035;InbreedingCoeff=0.0120;MQ=40.98;MQ0=104;MQRankSum=-5.457;QD=4.30;ReadPosRankSum=0.303;VQSLOD=1.9956;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:13:15:0,15,395	0/0:3,0:2:3.01:0,3,62	0/0:24,0:2:3.01:0,3,64	0/0:21,0:1:3.01:0,3,39	0/0:10,0:7:9.03:0,9,238	0/0:16,0:11:9.03:0,9,222	0/0:35,0:29:20.99:0,21,462	0/0:21,0:11:7.24:0,7,121	0/0:21,0:16:25.31:0,25,663	0/0:15,0:9:6.02:0,6,99	./.	1/1:28,2:22:6.78:358,7,0	0/1:31,17:31:99:118,0,188	0/0:27,0:21:33.92:0,34,841	0/0:15,0:13:21.07:0,21,636	0/0:16,0:16:27.09:0,27,935	0/1:23,0:16:99:348,0,232	0/1:16,0:9:2.15:2,0,282	0/1:13,0:5:10.96:11,0,85	0/0:13,0:8:9.03:0,9,154	0/1:62,0:41:46:46,0,367	1/1:13,0:9:5.94:45,6,0	1/1:12,0:7:0.47:1,0,0	0/1:35,1:16:99:130,0,124	0/0:17,0:13:8.82:0,9,104	0/1:20,0:15:61.28:133,0,61	0/1:17,0:14:99:198,0,178	0/0:5,0:2:3.01:0,3,61
chr10	48299468	.	G	GC	840.40	PASS	AB=0.904;AC=12;AF=0.222;AN=54;BaseQRankSum=4.772;DP=510;FS=6.318;HRun=0;HaplotypeScore=82.3010;InbreedingCoeff=-0.3184;MQ=51.54;MQ0=45;MQRankSum=-2.517;QD=3.47;ReadPosRankSum=0.538;VQSLOD=2.1883;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:21:17.97:0,18,219	0/0:4,0:3:6.02:0,6,70	0/0:20,0:8:24.07:0,24,299	0/0:14,0:3:8.68:0,9,70	0/0:9,1:7:5.72:0,6,52	0/0:11,0:7:15.03:0,15,176	0/0:28,0:16:23.81:0,24,326	0/1:21,1:10:47:47,0,169	0/0:13,0:10:18.53:0,19,248	0/1:17,0:12:99:115,0,214	0/0:11,0:6:3.01:0,3,42	0/1:29,2:27:0.78:1,0,500	0/1:35,5:29:99:139,0,144	0/1:20,6:20:99:144,0,286	0/0:12,0:11:27.09:0,27,366	0/0:17,0:13:33.11:0,33,437	0/1:13,2:14:82.68:83,0,100	0/1:15,1:10:43.01:43,0,196	0/0:10,0:7:18.03:0,18,221	0/0:10,1:6:8.93:0,9,75	0/0:40,1:30:27.91:0,28,393	0/1:16,1:17:32.11:32,0,75	0/1:19,1:20:23.62:24,0,146	0/0:37,2:23:1.08:0,1,200	0/1:9,1:8:31.73:32,0,54	0/1:11,5:16:99:179,0,242	0/1:10,2:10:95.42:145,0,95	./.
chr10	48299520	.	C	CCCCTACCTGTGT	732.41	PASS	AB=0.978;AC=13;AF=0.232;AN=56;BaseQRankSum=6.305;DP=762;FS=51.032;HRun=0;HaplotypeScore=221.6265;InbreedingCoeff=-0.1393;MQ=50.27;MQ0=64;MQRankSum=-3.538;QD=2.13;ReadPosRankSum=-1.878;VQSLOD=1.1084;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:31:72.25:0,72,2154	0/0:10,0:8:24.05:0,24,570	0/0:42,0:14:41.98:0,42,838	0/0:32,0:16:34.88:0,35,918	0/0:21,0:16:27.21:0,27,803	0/0:14,0:11:33.07:0,33,996	0/0:33,0:26:54.14:0,54,1643	0/1:32,0:29:99:174,0,710	0/0:18,0:14:30:0,30,736	0/1:33,0:25:2.19:2,0,1301	0/0:18,0:16:32.60:0,33,641	0/0:36,0:26:33.94:0,34,1417	0/0:22,0:19:32.06:0,32,1078	0/1:27,0:23:99:106,0,786	0/0:15,0:13:24.08:0,24,757	0/0:20,0:17:48.15:0,48,1339	0/1:37,0:35:16.70:17,0,1852	0/0:31,0:20:27.33:0,27,1084	0/1:20,0:15:83.47:83,0,264	0/0:20,0:19:31.11:0,31,1367	0/1:58,0:48:99:149,0,1610	0/1:37,0:28:69.70:70,0,665	0/1:19,8:24:99:142,0,822	0/0:50,0:38:17.23:0,17,1895	0/1:28,0:23:85.78:86,0,847	0/1:22,0:16:23.90:24,0,958	0/1:21,0:20:9.08:9,0,1465	1/1:1,0:1:2.97:20,3,0
chr10	48301045	.	G	GA	13508.26	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-17.118;DP=749;FS=6.628;HRun=5;HaplotypeScore=64.5025;InbreedingCoeff=0.9999;MQ=81.55;MQ0=0;MQRankSum=-3.150;QD=34.20;ReadPosRankSum=1.227;VQSLOD=5.1371;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:84.21:0,84,902	0/0:13,0:13:36.09:0,36,387	0/0:21,0:21:51.07:0,51,520	0/0:18,0:18:45.07:0,45,462	1/1:2,37:39:99:1379,108,0	0/0:32,0:32:87.22:0,87,935	0/0:24,0:24:69.17:0,69,742	1/1:1,33:34:99:1272,99,0	0/0:19,0:19:48.12:0,48,516	1/1:5,35:40:99:1366,105,0	1/1:3,28:31:75.24:985,75,0	0/0:21,0:21:60.12:0,60,629	0/0:27,0:27:81.20:0,81,870	1/1:3,13:16:33.11:434,33,0	0/0:32,0:32:93.19:0,93,982	0/0:28,0:28:78.20:0,78,838	1/1:0,16:16:48.16:632,48,0	1/1:0,17:17:48.16:632,48,0	1/1:3,18:21:54.17:697,54,0	1/1:5,38:43:99:1389,108,0	1/1:2,16:18:45.15:592,45,0	0/0:30,0:30:81.03:0,81,852	0/0:35,0:35:99:0,102,1096	0/0:25,0:25:69.17:0,69,742	1/1:3,26:29:78.25:1026,78,0	1/1:8,30:38:90.28:1169,90,0	1/1:2,39:40:99:1461,111,0	1/1:0,12:12:36.12:474,36,0
chr10	48301420	.	C	CTGTTTCCAA	38205.26	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-13.396;DP=671;FS=4.191;HRun=0;HaplotypeScore=167.8761;InbreedingCoeff=0.9951;MQ=81.44;MQ0=0;MQRankSum=-19.545;QD=126.09;ReadPosRankSum=1.843;VQSLOD=6.2669;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:90.31:0,90,2875	0/0:10,0:10:30.10:0,30,974	0/0:25,0:25:72.24:0,72,2139	0/0:22,0:22:58.07:0,58,1614	1/1:4,29:34:90.31:4270,90,0	0/0:30,0:30:90.31:0,90,2826	0/0:25,0:25:75.26:0,75,2359	1/1:13,19:36:99:4443,102,0	0/0:34,0:34:99:0,99,3000	1/1:5,16:25:72.24:3231,72,0	1/1:2,13:19:48.16:2142,48,0	0/0:29,0:29:87.30:0,87,2796	0/0:31,0:31:93.31:0,93,2938	1/1:3,15:20:54.19:2599,54,0	0/0:36,0:36:99:0,108,3283	0/0:26,0:26:78.25:0,78,2471	1/1:2,19:24:60.21:3029,60,0	1/1:2,8:11:30.10:1453,30,0	1/1:6,9:16:48.13:2163,48,0	1/1:10,17:28:81.15:3148,81,0	1/1:2,3:5:12.04:464,12,0	0/0:18,0:18:54.19:0,54,1715	0/0:23,0:23:69.24:0,69,2211	0/0:29,0:29:87.30:0,87,2722	1/1:2,24:28:78.27:3874,78,0	1/1:5,14:23:69.24:3138,69,0	1/1:1,20:22:66.23:3227,66,0	1/1:1,6:11:21.07:1025,21,0
chr10	48304865	.	G	GGTT	4313.44	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=0.365;DP=701;FS=4.794;HRun=0;HaplotypeScore=114.5050;InbreedingCoeff=0.9751;MQ=72.18;MQ0=1;MQRankSum=-0.827;QD=36.55;ReadPosRankSum=0.680;VQSLOD=5.4241;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:93.23:0,93,1241	0/0:2,0:3:9:0,9,107	0/0:30,0:28:35.95:0,36,583	0/0:27,0:26:27.11:0,27,485	0/0:31,0:31:75.21:0,75,1022	0/0:20,0:20:51.09:0,51,656	0/0:17,0:17:45.13:0,45,612	0/0:27,0:27:54.18:0,54,762	0/0:18,0:18:36.12:0,36,517	0/0:30,0:30:60.18:0,60,829	0/0:29,0:29:60.18:0,60,826	0/0:29,0:29:63.21:0,63,905	0/0:23,0:23:51.17:0,51,733	0/0:25,0:25:66.18:0,66,909	0/0:32,0:33:72.17:0,72,954	0/0:34,0:34:87.28:0,87,1233	0/0:24,0:24:60.17:0,60,824	0/0:16,0:16:39.10:0,39,538	1/1:11,10:21:32.99:450,33,0	1/1:8,23:31:66.05:1218,66,0	1/1:9,25:34:63.20:1238,63,0	0/0:19,0:19:45.14:0,45,630	0/0:22,0:22:54.17:0,54,758	0/0:36,0:36:81.20:0,81,1087	0/0:27,0:27:63.18:0,63,853	0/0:25,0:25:58.26:0,58,938	1/1:4,28:32:69.24:1407,69,0	0/0:5,0:5:12.04:0,12,172
chr10	48305932	.	G	GT	1580.10	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=4.446;DP=665;FS=6.710;HRun=12;HaplotypeScore=75.7117;InbreedingCoeff=0.9877;MQ=69.21;MQ0=2;MQRankSum=0.877;QD=11.79;ReadPosRankSum=-1.900;VQSLOD=2.8253;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:27:55.67:0,56,400	0/0:11,0:11:31.85:0,32,223	0/0:18,0:14:16.44:0,16,103	0/0:10,0:11:10.79:0,11,84	0/0:38,0:41:76.18:0,76,695	0/0:25,0:25:53.60:0,54,394	0/0:21,0:21:47.66:0,48,346	1/1:13,26:40:43.13:638,43,0	0/0:21,0:21:44.69:0,45,325	0/0:24,0:25:67.64:0,68,487	0/0:22,0:22:56.64:0,57,416	0/0:19,0:19:47.68:0,48,350	0/0:32,1:33:60.22:0,60,598	0/0:21,0:21:47.64:0,48,346	0/0:27,0:28:61.61:0,62,440	0/0:29,0:30:79.55:0,80,575	0/0:19,0:19:47.48:0,47,350	0/0:19,0:19:35.76:0,36,263	1/1:6,3:22:46.25:292,46,0	1/1:3,2:27:60.43:347,60,0	1/1:5,0:16:28.88:143,29,0	0/0:17,0:17:38.69:0,39,283	0/0:28,1:29:42.39:0,42,472	0/0:19,0:19:38.73:0,39,284	0/0:24,0:25:58.60:0,59,420	0/0:35,0:35:80.32:0,80,582	1/1:6,2:28:60.16:336,60,0	0/0:15,0:15:38.71:0,39,280
chr10	48306092	.	T	TTAA	91.50	PASS	AB=0.762;AC=1;AF=0.018;AN=56;BaseQRankSum=3.779;DP=670;FS=17.702;HRun=0;HaplotypeScore=94.0522;InbreedingCoeff=-0.0182;MQ=87.02;MQ0=0;MQRankSum=-3.637;QD=5.72;ReadPosRankSum=-3.216;VQSLOD=0.0780;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,105,1893	0/0:10,0:10:30.10:0,30,559	0/0:20,0:20:54.15:0,54,912	0/0:25,0:25:69.48:0,69,1127	0/0:31,0:31:90.28:0,90,1596	0/0:16,0:16:48.16:0,48,884	0/0:12,0:12:36.11:0,36,637	0/0:40,0:40:99:0,114,2058	0/0:23,0:23:66.23:0,66,1210	0/0:22,0:22:63.21:0,63,1147	0/0:27,0:27:78.27:0,78,1432	0/0:14,0:14:42.13:0,42,750	0/0:31,0:31:90.31:0,90,1675	0/0:27,0:27:81.26:0,81,1472	0/0:26,0:26:75.24:0,75,1367	0/0:17,0:17:48.15:0,48,846	0/0:21,0:21:60.19:0,60,1067	0/0:19,0:19:51.17:0,51,925	0/0:22,0:22:60.17:0,60,1028	0/0:23,0:23:69.20:0,69,1250	0/0:23,0:23:63.19:0,63,1119	0/0:35,0:35:99:0,102,1863	0/0:19,0:19:57.16:0,57,983	0/0:23,0:23:69.24:0,69,1273	0/0:31,0:31:90.28:0,90,1590	0/0:27,0:27:78.27:0,78,1452	0/0:34,0:33:99:0,99,1783	0/1:11,5:16:99:166,0,535
chr10	48308614	.	G	GTGC	18813.02	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-15.016;DP=635;FS=21.434;HRun=0;HaplotypeScore=84.9783;InbreedingCoeff=0.9855;MQ=83.61;MQ0=0;MQRankSum=-6.780;QD=60.11;ReadPosRankSum=0.544;VQSLOD=4.3559;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:66.20:0,66,1132	0/0:11,0:11:33.10:0,33,542	0/0:25,0:25:72.23:0,72,1179	0/0:16,0:16:42.06:0,42,662	1/1:5,25:30:72.25:1661,72,0	0/0:36,0:36:99:0,108,1881	0/0:22,0:22:63.20:0,63,1083	1/1:6,23:31:87.29:1916,87,0	0/0:21,0:21:63.20:0,63,1083	1/1:0,15:15:42.01:993,42,0	1/1:3,12:15:36.12:839,36,0	0/0:25,0:25:72.25:0,72,1270	0/0:20,0:20:57.20:0,57,1004	1/1:0,19:20:54.19:1268,54,0	0/0:25,0:25:75.21:0,75,1249	0/0:29,0:29:84.29:0,84,1481	1/1:2,22:25:60.21:1398,60,0	1/1:1,21:22:63.22:1478,63,0	1/1:1,16:17:51.17:1172,51,0	1/1:5,27:32:63.22:1484,63,0	1/1:0,31:32:80.94:1911,81,0	0/0:12,0:12:36.11:0,36,607	0/0:28,0:28:78.27:0,78,1354	0/0:30,0:30:90.31:0,90,1577	1/1:0,11:11:27.09:639,27,0	1/1:3,16:19:57.20:1315,57,0	1/1:5,37:42:99:2597,111,0	1/1:0,2:2:6.02:142,6,0
chr10	48308824	.	C	CCT	20325.80	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-18.368;DP=687;FS=5.682;HRun=0;HaplotypeScore=73.3388;InbreedingCoeff=0.9978;MQ=88.25;MQ0=0;MQRankSum=-3.896;QD=55.23;ReadPosRankSum=2.287;VQSLOD=5.4231;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:63.18:0,63,979	0/0:14,0:14:39.13:0,39,626	0/0:21,0:21:60.19:0,60,926	0/0:27,0:27:78.26:0,78,1210	1/1:0,26:27:72.25:1463,72,0	0/0:31,0:31:90.31:0,90,1468	0/0:25,0:25:72.22:0,72,1125	1/1:2,41:43:99:2438,120,0	0/0:28,0:28:84.27:0,84,1338	1/1:1,26:30:87.22:1619,87,0	1/1:0,18:19:51.18:1036,51,0	0/0:19,0:19:57.19:0,57,914	0/0:26,0:26:78.24:0,78,1215	1/1:0,17:17:48.16:975,48,0	0/0:23,0:23:66.23:0,66,1077	0/0:24,0:24:72.22:0,72,1128	1/1:0,23:24:63.22:1280,63,0	1/1:1,18:20:48.16:975,48,0	1/1:0,22:22:63.22:1260,63,0	1/1:1,39:42:99:2129,108,0	1/1:0,32:32:93.32:1890,93,0	0/0:21,0:21:63.20:0,63,1004	0/0:23,0:23:66.19:0,66,1022	0/0:15,0:15:42.14:0,42,685	1/1:0,22:22:57.20:1158,57,0	1/1:0,29:30:90.30:1790,90,0	1/1:0,35:35:99:2007,99,0	1/1:0,5:5:15.05:305,15,0
chr10	48309429	.	T	TTCCC	717.93	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=-2.745;DP=654;FS=18.634;HRun=0;HaplotypeScore=108.3614;InbreedingCoeff=0.5862;MQ=58.45;MQ0=12;MQRankSum=2.245;QD=12.60;ReadPosRankSum=-6.638;VQSLOD=-0.3103;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:93.24:0,93,1435	0/0:7,0:7:12.04:0,12,197	0/1:30,0:12:10.52:11,0,241	0/0:34,0:16:6.49:0,6,341	0/0:26,0:26:37.34:0,37,1116	0/0:34,0:34:90.23:0,90,1382	0/0:18,0:18:39.12:0,39,643	1/1:8,17:26:51.11:810,51,0	0/0:18,0:18:48.14:0,48,770	0/0:25,0:24:66.19:0,66,1031	0/0:21,0:21:54.15:0,54,847	0/0:15,0:15:36.04:0,36,550	0/0:22,0:22:51.17:0,51,871	0/0:27,0:27:63.13:0,63,1046	0/0:25,0:24:54.16:0,54,871	0/0:23,0:23:63.20:0,63,1055	0/0:25,0:25:54.18:0,54,912	0/0:13,0:12:27.05:0,27,406	0/0:14,0:11:27.09:0,27,462	0/0:28,0:28:81.26:0,81,1362	0/0:23,0:22:54.13:0,54,813	0/0:23,0:23:60.20:0,60,996	0/0:18,0:18:40.20:0,40,596	0/0:21,0:21:48.15:0,48,778	0/0:23,0:23:63.20:0,63,1026	0/0:39,0:39:99:0,102,1681	0/0:29,0:29:72.08:0,72,1083	0/0:6,0:4:9.03:0,9,154
chr10	48310051	.	A	ATATATGTG	18582.53	PASS	AB=0.522;AC=25;AF=0.463;AN=54;BaseQRankSum=-4.569;DP=660;FS=1.079;HRun=0;HaplotypeScore=150.3560;InbreedingCoeff=0.9157;MQ=67.03;MQ0=0;MQRankSum=-13.296;QD=60.93;ReadPosRankSum=-0.418;VQSLOD=4.4166;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:56:99:0,153,3680	0/0:7,0:7:21.07:0,21,571	0/0:24,0:23:18.05:0,18,1364	0/0:32,0:31:63.71:0,64,1569	1/1:1,39:46:54.04:2359,54,0	0/0:26,0:26:78.22:0,78,2087	0/0:26,0:26:78.24:0,78,1828	1/1:0,0:34:83.29:1644,83,0	0/0:24,0:24:72.25:0,72,1892	1/1:1,23:27:70.48:2726,70,0	1/1:2,17:23:39.13:1670,39,0	0/0:24,0:24:72.21:0,72,1865	0/0:24,0:24:69.20:0,69,1752	1/1:3,11:18:27.09:1146,27,0	0/0:29,0:29:84.27:0,84,2143	0/0:19,0:19:51.11:0,51,1449	1/1:0,13:20:27.09:1051,27,0	1/1:2,14:21:27.09:1114,27,0	1/1:5,0:21:46.51:1106,47,0	1/1:1,0:19:24.08:896,24,0	./.	0/0:16,0:16:48.16:0,48,1323	0/0:25,0:25:75.26:0,75,2011	0/0:12,0:12:36.09:0,36,803	1/1:1,17:20:42.14:1822,42,0	1/1:1,23:26:65.03:2044,65,0	0/1:2,0:24:5.11:869,0,5	1/1:0,5:6:3.01:135,3,0
chr10	48310426	.	G	GAA	18809.46	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-14.377;DP=553;FS=1.505;HRun=1;HaplotypeScore=60.0312;InbreedingCoeff=0.9957;MQ=89.13;MQ0=9;MQRankSum=-4.443;QD=49.76;ReadPosRankSum=1.765;VQSLOD=4.8702;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:72.24:0,72,1102	0/0:7,0:7:18.06:0,18,274	0/0:17,0:17:51.13:0,51,739	0/0:26,0:26:70.75:0,71,972	1/1:0,24:25:72.12:1255,72,0	0/0:34,0:34:99:0,99,1512	0/0:18,0:18:51.16:0,51,758	1/1:2,20:22:36.44:1041,36,0	0/0:17,0:17:48.13:0,48,692	1/1:0,31:31:90.31:1720,90,0	1/1:1,17:19:51.17:977,51,0	1/1:0,20:20:45.15:869,45,0	1/1:0,16:16:39.13:746,39,0	1/1:0,13:14:27.09:522,27,0	0/0:16,0:16:48.16:0,48,735	0/0:16,0:16:48.15:0,48,714	1/1:0,20:20:54.19:1042,54,0	1/1:0,13:14:39.13:753,39,0	1/1:0,22:23:69.22:1284,69,0	1/1:2,20:22:54.13:1000,54,0	1/1:0,6:6:15.05:290,15,0	1/1:0,10:10:30.02:504,30,0	1/1:1,25:25:68.94:1318,69,0	1/1:0,16:16:48.16:927,48,0	1/1:2,20:21:52.32:1039,52,0	1/1:0,24:24:72.23:1357,72,0	1/1:0,33:32:90.31:1737,90,0	1/1:2,12:9:24.07:429,24,0
chr10	48310562	.	A	AT	2160.69	PASS	AB=0.929;AC=9;AF=0.161;AN=56;BaseQRankSum=3.908;DP=491;FS=1.527;HRun=0;HaplotypeScore=78.1826;InbreedingCoeff=0.8475;MQ=72.12;MQ0=0;MQRankSum=0.256;QD=20.98;ReadPosRankSum=0.894;VQSLOD=5.4055;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:45.15:0,45,620	0/0:9,0:9:27.09:0,27,378	0/0:12,0:12:26.82:0,27,323	0/0:7,0:6:9.22:0,9,60	0/0:18,0:18:47.51:0,48,266	0/0:23,0:23:69.23:0,69,964	0/0:13,0:13:39.13:0,39,543	0/0:29,0:29:78.15:0,78,405	0/0:13,0:13:36.12:0,36,503	0/0:20,0:20:41.33:0,41,210	0/0:20,0:20:27.52:0,28,234	0/0:17,0:17:51.17:0,51,712	0/0:16,0:16:45.15:0,45,628	0/0:26,0:26:63.95:0,64,357	0/0:14,0:14:39.13:0,39,545	0/0:13,0:13:39.12:0,39,530	0/0:12,0:12:29.08:0,29,164	0/0:15,0:15:33.29:0,33,188	1/1:10,8:19:31.55:326,32,0	1/1:7,27:34:82.68:941,83,0	1/1:2,4:6:13.24:145,13,0	0/0:16,0:16:48.16:0,48,671	0/0:19,0:19:57.16:0,57,759	0/0:18,0:18:54.18:0,54,755	0/0:21,0:21:50.02:0,50,270	0/0:21,0:21:57.35:0,57,294	1/1:4,27:31:79.84:886,80,0	0/1:12,1:13:25.85:26,0,104
chr10	48310635	.	A	AT	14299.16	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-10.292;DP=559;FS=2.219;HRun=1;HaplotypeScore=54.3744;InbreedingCoeff=0.9995;MQ=84.33;MQ0=0;MQRankSum=-4.720;QD=44.41;ReadPosRankSum=0.854;VQSLOD=4.6853;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:48.16:0,48,670	0/0:9,0:9:27.09:0,27,378	0/0:21,0:21:57.11:0,57,731	0/0:16,0:16:35.52:0,36,524	1/1:1,25:26:72.25:1151,72,0	0/0:19,0:19:51.17:0,51,713	0/0:13,0:13:39.13:0,39,546	1/1:2,37:39:99:1727,114,0	0/0:9,0:9:27.09:0,27,378	1/1:1,39:40:99:1912,120,0	1/1:1,26:27:78.27:1247,78,0	0/0:18,0:18:54.18:0,54,755	0/0:23,0:23:69.22:0,69,948	1/1:3,24:27:30.31:1049,30,0	0/0:22,0:22:66.22:0,66,923	0/0:18,0:18:54.18:0,54,755	1/1:1,16:17:42.14:671,42,0	1/1:0,16:16:48.16:767,48,0	1/1:0,11:11:33.11:526,33,0	1/1:1,20:21:51.17:815,51,0	1/1:1,11:12:33.11:528,33,0	0/0:17,0:17:51.17:0,51,713	0/0:20,0:20:60.20:0,60,839	0/0:15,0:15:45.14:0,45,612	1/1:1,22:23:63.21:1007,63,0	1/1:0,18:18:54.18:864,54,0	1/1:1,30:31:87.28:1364,87,0	1/1:0,14:14:42.14:671,42,0
chr10	48311066	.	CT	C	4924.79	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=12.683;DP=632;FS=16.906;HRun=8;HaplotypeScore=62.2422;InbreedingCoeff=0.9998;MQ=86.40;MQ0=0;MQRankSum=-2.306;QD=24.14;ReadPosRankSum=0.980;VQSLOD=3.6767;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:72.22:0,72,870	0/0:13,0:13:36.11:0,36,435	0/0:23,0:23:60.10:0,60,662	0/0:20,0:20:44.21:0,44,493	1/1:0,16:16:42.06:406,42,0	0/0:32,0:32:90.27:0,90,1077	0/0:23,0:23:63.17:0,63,740	1/1:5,21:26:63.10:609,63,0	0/0:25,0:25:69.18:0,69,799	1/1:3,15:18:39.05:377,39,0	1/1:4,15:19:33.04:319,33,0	0/0:14,0:14:42.13:0,42,506	0/0:29,0:29:81.19:0,81,944	1/1:0,11:11:30.05:290,30,0	0/0:29,0:29:69.20:0,69,819	0/0:26,0:26:72.22:0,72,864	1/1:2,26:28:75.12:724,75,0	1/1:0,15:15:42.07:406,42,0	0/0:19,0:19:45.14:0,45,543	0/0:29,0:29:81.24:0,81,965	0/0:24,0:24:66.17:0,66,765	0/0:25,0:25:60.17:0,60,709	0/0:20,0:20:57.14:0,57,648	0/0:17,0:17:45.11:0,45,519	1/1:2,22:24:66.10:637,66,0	1/1:5,29:34:84.13:811,84,0	0/0:31,0:31:81.24:0,81,966	1/1:0,13:13:36.06:348,36,0
chr10	48311268	.	CAT	C	3162.68	PASS	AB=0.970;AC=33;AF=0.589;AN=56;BaseQRankSum=10.634;DP=504;FS=1.923;HRun=0;HaplotypeScore=91.3793;InbreedingCoeff=0.6663;MQ=74.10;MQ0=15;MQRankSum=-1.530;QD=11.63;ReadPosRankSum=2.684;VQSLOD=3.6539;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:20:18.88:0,19,226	0/0:7,0:7:7.52:0,8,138	0/0:30,0:20:51.52:0,52,506	0/0:47,0:25:58:0,58,600	1/1:11,0:12:26.89:217,27,0	0/0:25,0:25:65.93:0,66,666	0/0:22,0:21:41.82:0,42,388	1/1:1,0:13:32.83:254,33,0	0/0:17,0:17:26.60:0,27,366	1/1:0,0:13:29.87:228,30,0	1/1:10,1:11:12.46:160,12,0	1/1:1,13:14:2.91:44,3,0	1/1:15,1:16:38.60:301,39,0	1/1:18,0:17:19.24:264,19,0	0/0:21,0:21:62.84:0,63,605	0/0:19,0:19:46.27:0,46,477	0/1:15,0:15:15.07:195,0,15	0/1:8,1:9:14.59:133,0,15	1/1:0,0:10:29.80:232,30,0	1/1:1,0:22:8.78:55,9,0	0/0:0,0:23:0:0,0,0	1/1:3,16:18:6.02:88,6,0	1/1:1,7:8:5.72:61,6,0	1/1:3,34:37:32.88:465,33,0	1/1:15,0:14:12:220,12,0	1/1:15,0:15:25.62:309,26,0	1/1:0,0:15:10.67:67,11,0	0/1:7,0:7:32.38:74,0,32
chr10	48311269	.	ATATG	A	2571.86	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=9.790;DP=516;FS=0.000;HRun=0;HaplotypeScore=110.7836;InbreedingCoeff=0.3931;MQ=72.52;MQ0=16;MQRankSum=-2.095;QD=9.19;ReadPosRankSum=3.134;VQSLOD=2.3390;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:20:19.85:0,20,309	0/0:8,0:8:23.97:0,24,313	0/0:30,0:20:51.52:0,52,506	0/0:46,0:24:58:0,58,600	1/1:13,0:13:26.89:217,27,0	0/0:25,0:25:65.96:0,66,804	0/0:24,0:23:23.40:0,23,468	1/1:14,0:13:32.83:254,33,0	0/0:17,0:17:41.08:0,41,508	1/1:14,0:14:9.18:204,9,0	0/1:11,0:11:20.72:125,0,21	1/1:14,0:14:0.68:2,1,0	1/1:12,2:15:31.63:331,32,0	0/1:18,0:17:46.94:221,0,47	0/0:21,0:21:62.84:0,63,688	0/0:20,0:20:56.98:0,57,631	0/1:17,0:17:99:167,0,142	0/1:12,0:11:86.10:86,0,132	1/1:10,0:10:29.93:246,30,0	1/1:24,0:22:8.90:83,9,0	0/0:23,0:23:0:0,0,0	1/1:17,0:18:4.31:16,4,0	1/1:7,0:7:4.53:22,5,0	1/1:35,2:37:26.98:142,27,0	0/1:16,0:15:44.34:172,0,44	0/1:17,0:17:75.23:301,0,75	1/1:15,0:15:11.65:122,12,0	0/1:7,0:7:53.76:54,0,76
chr10	48311271	.	ATG	A	611.60	PASS	AB=0.969;AC=21;AF=0.420;AN=50;BaseQRankSum=3.722;DP=561;FS=11.241;HRun=0;HaplotypeScore=106.9916;InbreedingCoeff=0.1270;MQ=68.60;MQ0=19;MQRankSum=-0.358;QD=2.14;ReadPosRankSum=2.426;VQSLOD=1.2980;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:23,1:23:17.83:152,18,0	0/1:9,0:9:65.34:65,0,91	./.	./.	0/0:18,0:18:2.99:0,3,24	0/1:23,0:23:5.34:5,0,145	0/1:22,1:24:33.97:34,0,73	./.	0/1:16,2:18:46.57:47,0,116	0/0:18,0:18:3.41:0,3,19	0/0:13,0:13:6:0,6,59	0/1:15,0:15:13.04:13,0,18	0/1:17,0:17:11.80:30,0,12	0/0:19,0:18:14.98:0,15,141	0/0:23,0:22:7.27:0,7,126	0/1:18,1:19:16.92:17,0,106	0/0:17,0:17:9.43:0,9,145	0/1:14,0:12:2.07:2,0,115	1/1:11,0:11:2.75:14,3,0	1/1:24,0:22:5.63:28,6,0	0/0:23,0:23:0:0,0,0	0/1:23,0:22:7.89:71,0,8	1/1:9,0:9:2.96:19,3,0	1/1:37,0:37:32.32:215,32,0	0/0:24,0:23:12.24:0,12,154	0/0:18,0:18:17.17:0,17,141	1/1:16,0:16:11.03:56,11,0	0/0:10,0:10:9.03:0,9,125
chr10	48312625	.	TCTGTATGCTAGTA	T	21850.89	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=18.275;DP=632;FS=0.665;HRun=0;HaplotypeScore=248.7118;InbreedingCoeff=0.9585;MQ=69.01;MQ0=0;MQRankSum=-16.190;QD=72.35;ReadPosRankSum=1.023;VQSLOD=4.5284;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:66.23:0,66,4155	0/0:11,0:11:33.10:0,33,2000	0/0:17,0:17:48.16:0,48,2186	0/0:12,0:12:4.91:0,5,1310	1/1:5,29:34:75.15:2707,75,0	0/0:27,0:26:78.25:0,78,4136	0/0:18,0:18:51.18:0,51,3181	1/1:7,9:16:27.08:674,27,0	0/0:18,0:18:51.18:0,51,3126	1/1:7,33:40:96.19:3326,96,0	1/1:4,16:20:36.08:1257,36,0	0/0:32,0:32:96.30:0,96,5847	0/0:34,0:34:96.33:0,96,5625	1/1:3,20:23:42.14:1676,42,0	0/0:32,0:32:96.32:0,96,5796	0/0:33,0:32:96.32:0,96,5899	1/1:1,12:13:18.06:717,18,0	1/1:2,11:13:27.09:1069,27,0	1/1:3,8:11:24.06:619,24,0	1/1:4,21:25:63.15:2329,63,0	1/1:5,9:14:8.99:259,9,0	0/0:32,0:32:93.31:0,93,5581	0/0:24,0:24:69.24:0,69,4284	0/0:18,0:18:48.12:0,48,2820	1/1:5,23:28:54.19:2147,54,0	1/1:8,23:31:65.92:1960,66,0	1/1:2,30:32:72.25:2873,72,0	1/1:0,2:2:6.02:239,6,0
chr10	48312998	.	G	GA	12516.80	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=16.423;DP=656;FS=9.532;HRun=4;HaplotypeScore=88.2855;InbreedingCoeff=0.9995;MQ=83.31;MQ0=0;MQRankSum=-1.761;QD=36.07;ReadPosRankSum=1.832;VQSLOD=4.4939;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,126,1429	0/0:10,0:10:30.09:0,30,340	0/0:23,0:23:53.99:0,54,573	0/0:16,0:16:27.08:0,27,305	1/1:0,31:31:87.29:1189,87,0	0/0:17,0:17:48.06:0,48,543	0/0:23,0:23:63.18:0,63,715	1/1:4,19:23:60.20:814,60,0	0/0:22,0:22:54.15:0,54,613	1/1:2,32:34:96.31:1294,96,0	1/1:1,18:19:48.16:656,48,0	0/0:28,0:28:78.21:0,78,875	0/0:16,0:16:42.10:0,42,466	1/1:1,25:26:69.06:943,69,0	0/0:30,0:30:87.25:0,87,986	0/0:18,0:18:51.13:0,51,569	1/1:0,31:31:87.29:1190,87,0	1/1:1,20:22:60.20:817,60,0	1/1:1,20:21:60.20:821,60,0	1/1:2,17:19:54.13:706,54,0	1/1:4,31:35:87.29:1190,87,0	0/0:19,0:19:57.16:0,57,646	0/0:19,0:19:54.11:0,54,591	0/0:20,0:20:60.17:0,60,680	1/1:4,23:27:54.18:738,54,0	1/1:3,20:23:60.19:805,60,0	1/1:0,27:27:75.25:1026,75,0	1/1:1,8:9:24.08:328,24,0
chr10	48313339	.	C	CT	3124.09	PASS	AB=0.735;AC=24;AF=0.429;AN=56;BaseQRankSum=-4.383;DP=462;FS=0.922;HRun=13;HaplotypeScore=52.9701;InbreedingCoeff=0.5389;MQ=64.19;MQ0=0;MQRankSum=0.797;QD=12.75;ReadPosRankSum=-0.032;VQSLOD=3.5316;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,1:33:33.42:0,33,368	0/0:8,0:8:14.61:0,15,94	0/0:9,0:4:2.76:0,3,19	0/0:4,0:4:2.80:0,3,6	1/1:9,7:16:21.49:195,21,0	0/1:10,1:11:7.07:7,0,102	0/0:13,0:13:23.73:0,24,163	0/0:35,0:37:46.38:0,46,312	0/0:20,0:21:46.57:0,47,314	1/1:7,19:26:56.95:500,57,0	1/1:3,15:19:35.10:353,35,0	0/0:22,0:22:38.51:0,39,266	0/0:23,0:23:56.42:0,56,390	0/1:3,10:13:14.13:168,0,14	0/0:18,0:18:35.61:0,36,247	0/0:9,0:10:16.89:0,17,109	1/1:5,18:23:19.45:315,19,0	0/1:6,9:15:8.13:218,0,8	0/1:10,12:23:11.21:182,0,11	1/1:2,6:8:15.02:139,15,0	1/1:7,10:19:12.21:233,12,0	0/0:5,0:5:8.88:0,9,62	0/0:14,0:14:25.74:0,26,170	0/1:8,0:8:6.89:7,0,102	1/1:5,18:23:42.05:390,42,0	0/1:8,8:16:27.91:188,0,28	1/1:3,10:13:15.02:139,15,0	1/1:0,11:12:32.87:293,33,0
chr10	48313414	.	AG	A	1863.83	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=-2.212;DP=438;FS=0.000;HRun=1;HaplotypeScore=60.3099;InbreedingCoeff=0.7535;MQ=55.06;MQ0=5;MQRankSum=2.523;QD=27.01;ReadPosRankSum=-0.853;VQSLOD=3.1247;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:96.33:0,96,1527	0/0:2,0:2:6.02:0,6,96	0/0:4,0:2:6.02:0,6,76	0/1:12,0:6:19.28:19,0,170	0/0:17,0:17:39.12:0,39,600	1/1:0,27:27:69.23:965,69,0	1/1:0,21:21:48.16:650,48,0	0/0:29,0:26:75.26:0,75,1188	1/1:0,9:9:27.09:377,27,0	0/0:13,0:13:39.13:0,39,623	0/0:10,0:10:27.07:0,27,393	0/0:8,0:7:21.07:0,21,332	0/0:19,0:19:57.19:0,57,911	0/0:8,0:8:21.07:0,21,335	0/0:11,0:11:33.11:0,33,527	0/0:8,0:8:24.08:0,24,384	0/0:36,0:36:96.26:0,96,1428	0/0:11,0:8:21:0,21,282	0/0:15,0:12:36.12:0,36,553	0/0:17,0:17:48.15:0,48,744	0/0:36,0:35:96.10:0,96,1492	0/0:2,0:2:6.02:0,6,96	0/0:11,0:11:33.11:0,33,527	0/0:17,0:17:48.16:0,48,767	0/0:16,0:16:45.07:0,45,666	0/0:16,0:16:48.16:0,48,766	0/0:12,0:11:30.10:0,30,479	0/0:17,0:17:51.17:0,51,815
chr10	48313604	.	T	TAC	13236.11	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=5.679;DP=417;FS=6.152;HRun=0;HaplotypeScore=59.0676;InbreedingCoeff=0.9924;MQ=74.52;MQ0=0;MQRankSum=-2.908;QD=51.91;ReadPosRankSum=1.221;VQSLOD=5.6247;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:69.23:0,69,1054	0/0:9,0:9:27.08:0,27,390	0/0:10,0:10:30.05:0,30,413	0/0:6,0:6:18.06:0,18,270	1/1:3,16:20:42.14:810,42,0	0/0:27,0:27:81.24:0,81,1192	0/0:11,0:11:33.11:0,33,505	1/1:4,25:29:75.18:1280,75,0	0/0:9,0:9:27.09:0,27,413	1/1:1,22:23:66.23:1275,66,0	1/1:0,17:17:51.17:983,51,0	0/0:11,0:11:33.09:0,33,479	0/0:8,0:8:24.08:0,24,367	1/1:1,14:15:42.14:811,42,0	0/0:12,0:12:36.12:0,36,551	0/0:11,0:11:30.10:0,30,459	1/1:0,13:13:36.12:695,36,0	1/1:0,17:17:51.17:985,51,0	1/1:0,13:13:39.13:747,39,0	1/1:0,7:7:21.07:405,21,0	1/1:0,7:7:21.07:406,21,0	0/0:11,0:11:33.11:0,33,504	0/0:8,0:8:24.08:0,24,367	0/0:5,0:5:12.04:0,12,184	1/1:0,29:30:78.27:1505,78,0	1/1:0,23:24:72.25:1367,72,0	1/1:2,25:27:69.24:1332,69,0	1/1:0,13:13:33.11:637,33,0
chr10	48313956	.	T	TCC	12261.65	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=19.495;DP=682;FS=3.303;HRun=2;HaplotypeScore=132.9954;InbreedingCoeff=0.9992;MQ=82.98;MQ0=1;MQRankSum=-12.100;QD=37.50;ReadPosRankSum=1.710;VQSLOD=5.0454;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,108,1625	0/0:13,0:13:39.09:0,39,528	0/0:31,0:31:81.71:0,82,1138	0/0:18,0:18:40.95:0,41,584	1/1:5,27:33:51.13:746,51,0	0/0:25,0:25:75.25:0,75,1148	0/0:27,0:27:81.24:0,81,1177	1/1:8,26:34:96.15:1368,96,0	0/0:30,0:30:90.29:0,90,1350	1/1:5,26:31:90.26:1351,90,0	1/1:5,25:30:67.04:968,67,0	0/0:26,0:26:78.26:0,78,1193	0/0:25,0:25:66.17:0,66,915	1/1:1,35:36:99:1576,108,0	0/0:29,0:29:84.29:0,84,1285	0/0:31,0:31:93.32:0,93,1424	1/1:2,27:29:72.24:1127,72,0	1/1:2,16:17:51.17:783,51,0	1/1:2,6:8:21.07:310,21,0	1/1:2,14:16:36.12:501,36,0	1/1:1,15:16:32.85:476,33,0	0/0:25,0:25:75.25:0,75,1144	0/0:22,0:22:63.21:0,63,961	0/0:17,0:17:48.15:0,48,713	1/1:6,12:18:48.09:621,48,0	1/1:5,29:34:99:1494,99,0	1/1:0,12:12:36.12:520,36,0	1/1:3,9:12:27.02:420,27,0
chr10	48313958	.	T	TA	9733.07	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=19.696;DP=680;FS=1.622;HRun=0;HaplotypeScore=131.5148;InbreedingCoeff=0.9987;MQ=84.72;MQ0=1;MQRankSum=-13.134;QD=29.86;ReadPosRankSum=1.701;VQSLOD=4.6569;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,105,1448	0/0:12,0:12:36.12:0,36,504	0/0:32,0:32:84.25:0,84,1100	0/0:18,0:18:48.14:0,48,634	1/1:11,24:35:51.01:589,51,0	0/0:26,0:26:78.24:0,78,1072	0/0:28,0:28:84.25:0,84,1139	1/1:9,26:35:99:1129,102,0	0/0:30,0:30:90.29:0,90,1241	1/1:5,26:31:92.98:1098,93,0	1/1:3,25:28:72.20:840,72,0	0/0:26,0:26:78.25:0,78,1076	0/0:22,0:22:66.21:0,66,905	1/1:2,35:37:99:1294,111,0	0/0:29,0:29:87.28:0,87,1200	0/0:31,0:31:93.31:0,93,1301	1/1:3,27:30:75.07:881,75,0	1/1:0,16:15:45.14:550,45,0	1/1:1,6:7:18.04:197,18,0	1/1:2,14:16:36.08:388,36,0	1/1:1,15:16:32.87:366,33,0	0/0:25,0:25:75.24:0,75,1022	0/0:23,0:23:63.21:0,63,879	0/0:16,0:16:48.16:0,48,671	1/1:5,12:17:42.04:447,42,0	1/1:5,29:34:96.14:1152,96,0	1/1:1,12:13:39.10:432,39,0	1/1:2,9:11:30.09:370,30,0
chr10	48314532	.	AGTGTGTGT	A	1483.15	PASS	AB=0.816;AC=15;AF=0.441;AN=34;BaseQRankSum=5.005;DP=430;FS=1.129;HRun=0;HaplotypeScore=169.5511;InbreedingCoeff=0.4643;MQ=58.30;MQ0=9;MQRankSum=-5.124;QD=9.89;ReadPosRankSum=2.901;VQSLOD=2.7836;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:13:3.01:0,3,43	0/0:7,0:7:9.03:0,9,268	./.	./.	./.	0/0:19,0:19:15.05:0,15,474	0/0:18,0:17:24.54:0,25,853	0/0:35,0:33:18.02:0,18,404	0/0:17,0:18:12.04:0,12,359	1/1:22,0:22:9.03:168,9,0	./.	0/1:9,6:15:5.74:69,0,6	1/1:11,7:19:14.69:319,15,0	./.	0/0:12,0:12:6.02:0,6,111	0/0:7,0:17:0.47:0,0,1	./.	1/1:7,0:7:3.01:78,3,0	1/1:11,0:10:6.02:134,6,0	1/1:17,0:17:6.02:128,6,0	./.	./.	./.	0/1:7,3:9:0:0,0,0	./.	1/1:20,0:20:1.12:315,1,0	0/1:27,0:28:70.45:399,0,70	./.
chr10	48314557	.	GTGTGTGTGTGTGTGTGTGTGAC	G	2111.25	PASS	AB=0.924;AC=16;AF=0.296;AN=54;BaseQRankSum=0.704;DP=418;FS=12.549;HRun=0;HaplotypeScore=221.7324;InbreedingCoeff=0.3969;MQ=39.82;MQ0=14;MQRankSum=-2.160;QD=17.59;ReadPosRankSum=-0.664;VQSLOD=1.2908;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:18:9.85:0,10,421	0/0:7,0:7:18.46:0,18,1042	0/0:2,0:1:2.98:0,3,22	0/0:5,0:2:6.02:0,6,177	1/1:15,3:16:5.92:73,6,0	0/0:19,0:18:25.01:0,25,1544	0/0:16,0:15:32.23:0,32,2219	0/0:25,0:23:8.64:0,9,2079	0/0:18,0:18:28.36:0,28,1361	0/1:17,1:17:26.78:588,0,27	1/1:10,2:11:7.16:77,7,0	0/0:17,0:17:21.53:0,22,518	0/0:24,0:23:20.99:0,21,1376	1/1:9,1:10:2.18:23,2,0	0/0:16,0:15:21.42:0,21,802	0/0:18,0:18:10.86:0,11,250	0/1:6,0:6:33.86:46,0,34	1/1:6,0:5:1.94:137,2,0	0/1:13,0:10:28.57:29,0,626	0/0:23,0:22:6.86:0,7,87	./.	0/0:21,0:21:12.04:0,12,450	0/0:18,0:18:20.33:0,20,510	0/0:14,0:13:5.50:0,5,78	1/1:13,1:14:6.01:96,6,0	0/1:12,6:18:99:1066,0,219	0/0:29,0:29:35.55:0,36,1150	1/1:5,0:4:9.03:138,9,0
chr10	48314569	.	GTGTGTGTGAC	G	2356.59	PASS	AB=0.976;AC=23;AF=0.479;AN=48;BaseQRankSum=-0.559;DP=400;FS=3.285;HRun=0;HaplotypeScore=174.6189;InbreedingCoeff=0.1642;MQ=36.64;MQ0=15;MQRankSum=-4.230;QD=9.74;ReadPosRankSum=2.368;VQSLOD=2.7110;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:13:6.58:0,7,41	0/0:6,0:6:12.51:0,13,314	./.	./.	0/1:19,0:17:0.04:0,0,0	0/0:17,0:16:16.55:0,17,424	0/0:16,0:15:25.89:0,26,771	0/1:23,0:19:99:228,0,311	0/1:20,0:20:33.82:34,0,360	1/1:20,0:19:25.84:383,26,0	1/1:12,0:11:1.15:3,1,0	0/1:16,0:16:55.29:90,0,55	0/1:21,0:20:62.29:231,0,62	1/1:13,0:13:0.14:2,0,0	0/0:18,0:17:14.82:0,15,202	0/0:16,0:16:2.25:0,2,5	1/1:5,0:5:3.42:36,3,0	1/1:6,0:5:4.15:102,4,0	0/1:12,0:9:10.16:207,0,10	1/1:16,9:24:4.81:162,5,0	./.	0/0:22,0:22:1.91:0,2,54	0/0:17,0:16:11.28:0,11,84	0/0:13,0:11:2.78:0,3,28	./.	1/1:18,0:18:2.95:468,3,0	0/1:24,6:30:48.87:548,0,49	1/1:2,0:1:0.89:2,1,0
chr10	48314577	.	GAC	G	1039.52	PASS	AB=1.000;AC=30;AF=0.600;AN=50;BaseQRankSum=-1.153;DP=451;FS=27.637;HRun=0;HaplotypeScore=171.5653;InbreedingCoeff=0.3079;MQ=37.01;MQ0=13;MQRankSum=-3.304;QD=3.10;ReadPosRankSum=0.079;VQSLOD=0.9777;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:14:0.10:0,0,0	0/1:7,0:7:4.64:5,0,42	./.	./.	0/1:23,0:21:0:0,0,0	0/1:27,0:26:18.57:19,0,30	0/0:20,0:19:14.25:0,14,84	1/1:3,15:15:43.44:329,43,0	0/1:23,0:23:19.41:19,0,29	1/1:22,0:21:28.66:235,29,0	1/1:11,0:10:1.15:3,1,0	0/1:19,0:19:62.04:62,0,115	0/1:24,0:23:7.84:8,0,123	1/1:14,0:14:1.78:5,2,0	0/0:18,0:17:11.29:0,11,79	0/1:22,0:22:0.11:0,0,1	1/1:7,0:7:8.35:43,8,0	1/1:6,0:5:4.14:36,4,0	1/1:14,0:11:12.44:91,12,0	1/1:27,0:26:4.18:21,4,0	./.	0/0:24,0:24:4.88:0,5,81	0/0:18,0:17:8.79:0,9,80	0/0:15,0:13:2.96:0,3,28	0/0:13,0:13:0:0,0,0	1/1:21,0:21:18.91:152,19,0	1/1:30,0:30:25.34:154,25,0	0/1:4,0:3:0.25:0,0,1
chr10	48314579	.	C	CGAGAG	1265.98	PASS	AB=0.972;AC=25;AF=0.500;AN=50;BaseQRankSum=4.265;DP=467;FS=61.305;HRun=0;HaplotypeScore=197.2332;InbreedingCoeff=-0.1497;MQ=37.33;MQ0=12;MQRankSum=-3.499;QD=3.75;ReadPosRankSum=-4.168;VQSLOD=-0.7246;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:16:6.46:63,6,0	0/1:7,0:7:5.32:169,0,5	./.	./.	0/0:23,0:21:1.25:0,1,3	0/1:27,0:26:78.32:78,0,144	0/1:19,0:18:31.93:32,0,184	0/0:17,0:14:39.12:0,39,296	0/1:22,0:22:25.56:26,0,64	0/1:24,0:23:41.04:41,0,191	1/1:12,0:11:5.81:49,6,0	0/0:18,0:20:1.23:0,1,164	0/1:24,0:24:7.37:7,0,341	1/1:14,0:14:5.14:37,5,0	0/1:11,1:20:26.83:27,0,105	1/1:22,0:22:9.05:90,9,0	0/1:7,0:7:2.26:80,0,2	0/1:6,0:5:28.87:34,0,29	0/1:14,0:12:67.27:126,0,67	0/1:28,0:27:1.70:95,0,2	./.	0/0:23,0:25:13.87:0,14,120	0/0:18,0:18:14.32:0,14,151	0/0:15,0:14:1.59:0,2,9	1/1:14,0:14:3.01:43,3,0	0/1:23,0:23:84.49:176,0,84	0/1:30,0:30:84.13:192,0,84	1/1:5,0:4:5.88:49,6,0
chr10	48314612	.	A	AAT	6566.99	PASS	AB=0.588;AC=23;AF=0.411;AN=56;BaseQRankSum=5.300;DP=600;FS=13.832;HRun=0;HaplotypeScore=152.5290;InbreedingCoeff=0.5606;MQ=59.66;MQ0=3;MQRankSum=0.548;QD=21.53;ReadPosRankSum=-2.051;VQSLOD=4.2481;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:23:40.19:0,40,554	0/0:12,0:12:26.55:0,27,333	0/0:13,0:11:30.08:0,30,444	0/0:24,0:17:0.59:0,1,467	1/1:13,16:28:32.96:392,33,0	0/0:28,0:27:41.37:0,41,603	0/0:19,0:19:30.07:0,30,440	1/1:25,0:23:60.14:952,60,0	0/0:26,0:26:21.78:0,22,304	0/1:9,18:27:64.88:799,0,65	1/1:4,9:13:21.07:288,21,0	0/0:25,0:25:50.13:0,50,588	0/0:21,0:21:36.74:0,37,398	1/1:8,13:23:18.02:224,18,0	0/0:26,0:25:29.76:0,30,409	0/0:22,0:22:28.26:0,28,371	0/1:2,9:11:9.25:76,0,9	0/1:2,5:7:10.80:99,0,11	0/1:8,13:21:52.93:602,0,53	1/1:9,22:31:57.75:804,58,0	1/1:5,4:7:6.02:80,6,0	0/0:28,0:28:34.58:0,35,457	0/0:15,0:15:33.50:0,33,399	0/0:12,0:11:7.82:0,8,98	1/1:11,12:23:3.48:51,3,0	0/1:9,21:30:73.78:822,0,74	1/1:10,24:34:25.93:602,26,0	1/1:18,2:18:48.16:777,48,0
chr10	48316077	.	C	CA	9038.79	PASS	AB=0.863;AC=29;AF=0.518;AN=56;BaseQRankSum=-8.015;DP=526;FS=4.110;HRun=7;HaplotypeScore=52.4837;InbreedingCoeff=0.8256;MQ=81.64;MQ0=0;MQRankSum=-0.802;QD=26.28;ReadPosRankSum=0.739;VQSLOD=5.4131;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:42.06:0,42,405	0/0:5,0:5:15.02:0,15,144	0/1:18,0:17:0.86:1,0,221	0/1:15,0:15:16.45:16,0,205	1/1:1,24:25:72.22:870,72,0	0/0:23,0:23:66.08:0,66,626	0/0:9,0:9:21.03:0,21,203	1/1:8,32:40:96.29:1157,96,0	0/0:17,0:17:51.07:0,51,487	1/1:3,20:24:63.06:739,63,0	1/1:2,21:23:57.17:688,57,0	0/0:19,0:19:54.09:0,54,521	0/0:18,0:18:54.03:0,54,506	1/1:2,5:7:15.05:181,15,0	0/0:22,0:22:60.09:0,60,579	0/0:20,0:20:51.08:0,51,493	1/1:0,17:17:39.12:471,39,0	1/1:2,13:15:36.11:435,36,0	0/1:6,14:20:6.86:464,0,7	1/1:4,25:29:75.16:875,75,0	1/1:2,11:13:21.06:254,21,0	0/0:10,0:10:24.04:0,24,232	0/0:11,0:11:27.03:0,27,261	0/0:11,0:11:33.05:0,33,319	1/1:2,16:18:39.12:471,39,0	1/1:5,21:26:37.20:717,37,0	1/1:5,24:30:75.23:906,75,0	1/1:2,22:24:66.20:793,66,0
chr10	48316925	.	A	AT	9270.87	PASS	AB=1.000;AC=27;AF=0.482;AN=56;BaseQRankSum=-16.541;DP=593;FS=1.056;HRun=6;HaplotypeScore=51.1724;InbreedingCoeff=0.8892;MQ=81.18;MQ0=0;MQRankSum=-1.125;QD=28.09;ReadPosRankSum=0.362;VQSLOD=5.0998;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:84.19:0,84,857	0/0:15,0:15:42.10:0,42,429	0/0:22,0:22:53.74:0,54,517	0/0:10,0:10:27.06:0,27,275	1/1:3,34:37:96.31:1207,96,0	0/0:11,0:11:30.07:0,30,306	0/0:23,0:23:66.15:0,66,673	1/1:6,36:42:99:1331,108,0	0/0:19,0:19:54.10:0,54,542	1/1:1,33:34:96.20:1147,96,0	1/1:1,27:28:78.25:981,78,0	0/0:14,0:14:39.08:0,39,398	0/0:18,0:18:48.10:0,48,490	1/1:0,15:15:45.14:565,45,0	0/0:28,0:28:84.19:0,84,857	0/0:23,0:23:69.16:0,69,704	1/1:0,19:19:57.18:717,57,0	1/1:2,24:26:72.23:906,72,0	1/1:10,1:11:3.01:38,3,0	1/1:19,0:19:3.01:38,3,0	1/1:7,1:8:3.01:38,3,0	0/0:21,0:21:54.12:0,54,551	0/0:22,0:22:60.12:0,60,605	0/0:8,0:8:24.05:0,24,245	1/1:3,34:37:96.31:1208,96,0	1/1:2,28:30:81.26:1019,81,0	0/1:18,0:18:0:0,0,0	1/1:2,4:6:6.02:75,6,0
chr10	48322309	.	C	CAAAAACAAA	13843.19	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-10.357;DP=635;FS=4.238;HRun=0;HaplotypeScore=148.7855;InbreedingCoeff=0.9923;MQ=61.63;MQ0=1;MQRankSum=-11.127;QD=67.20;ReadPosRankSum=-0.256;VQSLOD=4.8079;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:93.25:0,93,2297	0/0:4,0:4:12.04:0,12,316	0/0:14,0:13:30.43:0,30,533	0/0:16,0:15:38.45:0,38,874	1/1:1,18:22:33.03:1113,33,0	0/0:21,0:21:57.18:0,57,1527	0/0:24,0:24:69.22:0,69,1503	0/0:34,0:34:87.17:0,87,1708	0/0:11,0:11:33.10:0,33,903	1/1:4,17:26:66.16:2136,66,0	1/1:0,23:23:51.05:2010,51,0	0/0:19,0:19:51.18:0,51,1454	0/0:30,0:30:84.24:0,84,2111	1/1:0,16:21:30.10:1403,30,0	0/0:25,0:25:75.23:0,75,1894	0/0:29,0:29:78.27:0,78,2068	1/1:4,18:28:35.86:1668,36,0	1/1:4,19:27:28.91:1191,29,0	0/0:24,0:23:65.91:0,66,1489	0/0:27,0:27:75.20:0,75,1957	0/0:16,0:16:48.14:0,48,1244	0/0:15,0:15:42.14:0,42,1217	0/0:32,0:32:96.32:0,96,2581	0/0:21,0:21:54.15:0,54,1440	1/1:0,23:26:33.11:1568,33,0	1/1:1,19:23:63.62:2041,64,0	0/0:31,0:31:84.23:0,84,2216	1/1:1,8:8:15.05:713,15,0
chr10	48322910	.	A	AAAT	613.73	PASS	AC=14;AF=0.292;AN=48;BaseQRankSum=-2.730;DP=214;FS=1.173;HRun=0;HaplotypeScore=31.7984;InbreedingCoeff=0.5597;MQ=83.78;MQ0=1;MQRankSum=0.621;QD=16.15;ReadPosRankSum=-0.499;VQSLOD=3.0600;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:2,0:3:2.98:0,3,21	0/0:2,0:2:6.02:0,6,83	./.	0/0:21,0:10:1.46:0,1,14	0/0:7,0:7:3.01:0,3,41	0/0:9,0:9:15.04:0,15,189	./.	0/0:30,0:30:27.09:0,27,371	0/0:6,0:6:12.04:0,12,165	0/0:9,0:9:18.06:0,18,248	0/0:4,0:4:9.03:0,9,124	1/1:2,1:3:6.02:116,6,0	1/1:3,2:5:3.01:59,3,0	0/0:4,0:4:3.01:0,3,41	0/0:7,0:7:15.04:0,15,191	0/0:8,0:8:3.01:0,3,41	0/0:17,0:17:33.11:0,33,453	0/0:12,0:12:1.33:0,1,266	1/1:8,3:11:9.03:178,9,0	1/1:4,1:5:3.01:59,3,0	./.	1/1:3,0:3:3.01:49,3,0	1/1:2,0:2:3.01:59,3,0	./.	0/0:7,0:7:12.04:0,12,165	0/0:6,0:6:6.01:0,6,68	1/1:4,5:9:12.04:237,12,0	0/0:14,0:14:30.10:0,30,413
chr10	48323249	.	T	TA	6678.16	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-14.271;DP=508;FS=0.732;HRun=4;HaplotypeScore=45.3197;InbreedingCoeff=0.9933;MQ=82.18;MQ0=0;MQRankSum=-1.328;QD=38.16;ReadPosRankSum=2.489;VQSLOD=4.4369;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:66.19:0,66,749	0/0:4,0:4:12.03:0,12,136	0/0:15,0:15:27.68:0,28,374	0/0:14,0:14:24.99:0,25,279	1/1:0,20:20:60.20:821,60,0	0/0:23,0:23:66.17:0,66,737	0/0:14,0:14:36.10:0,36,408	0/0:31,0:31:78.20:0,78,869	0/0:21,0:21:60.17:0,60,681	1/1:1,29:30:87.28:1163,87,0	1/1:0,17:17:51.13:673,51,0	0/0:15,0:15:42.12:0,42,476	0/0:19,0:19:57.13:0,57,627	1/1:0,13:13:30.10:410,30,0	0/0:25,0:25:72.21:0,72,817	0/0:17,0:17:51.13:0,51,569	1/1:0,23:23:66.22:903,66,0	1/1:1,28:29:81.27:1108,81,0	0/0:15,0:15:42.09:0,42,463	0/0:14,0:14:42.10:0,42,466	0/0:9,0:9:21.06:0,21,238	0/0:18,0:18:51.14:0,51,578	0/0:15,0:15:42.09:0,42,455	0/0:8,0:8:21.06:0,21,238	1/1:1,11:12:30.10:410,30,0	1/1:1,18:19:54.18:739,54,0	0/0:33,0:32:96.24:0,96,1069	1/1:0,12:12:33.11:451,33,0
chr10	48324343	.	TTCTCTCTCTC	T	4882.51	PASS	AC=24;AF=0.480;AN=50;BaseQRankSum=4.755;DP=526;FS=0.636;HRun=0;HaplotypeScore=172.7261;InbreedingCoeff=0.8990;MQ=61.75;MQ0=9;MQRankSum=-6.753;QD=20.95;ReadPosRankSum=1.679;VQSLOD=4.1404;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:36.12:0,36,1570	0/0:9,0:9:6.02:0,6,174	./.	./.	1/1:21,0:32:18.95:404,19,0	0/0:15,0:14:6.02:0,6,180	0/0:21,0:21:21.05:0,21,811	0/0:29,0:29:15.66:0,16,290	0/0:12,0:12:21.07:0,21,1005	1/1:13,4:16:8.70:184,9,0	1/1:14,8:22:21.07:614,21,0	1/1:12,6:18:9.03:267,9,0	1/1:10,6:16:18.06:529,18,0	0/0:11,0:18:17.23:0,17,223	0/0:12,0:13:18.06:0,18,835	0/0:18,0:19:30.10:0,30,1254	0/0:16,0:25:43.28:0,43,693	0/0:14,0:19:41.91:0,42,762	./.	1/1:12,0:19:20.27:333,20,0	1/1:14,0:17:9.03:128,9,0	1/1:15,4:19:12.04:335,12,0	1/1:9,3:12:6.02:174,6,0	1/1:4,7:11:18.06:517,18,0	1/1:18,7:24:27.56:768,28,0	0/0:20,0:22:21.05:0,21,404	1/1:11,0:22:27.09:628,27,0	0/0:17,0:18:9.03:0,9,204
chr10	48325430	.	TGC	T	1200.36	PASS	AB=0.989;AC=20;AF=0.370;AN=54;BaseQRankSum=10.152;DP=642;FS=0.928;HRun=0;HaplotypeScore=157.5517;InbreedingCoeff=0.5652;MQ=47.94;MQ0=11;MQRankSum=-6.520;QD=5.11;ReadPosRankSum=-2.641;VQSLOD=2.3970;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:41.97:0,42,712	0/0:6,0:6:14.94:0,15,212	0/1:20,0:8:16.97:20,0,17	0/0:25,0:6:11.49:0,11,73	./.	0/0:34,0:34:30.88:0,31,847	0/0:24,0:24:6.57:0,7,577	0/1:38,0:37:97.36:97,0,490	0/0:27,0:27:72.07:0,72,1059	1/1:28,0:27:51.91:383,52,0	1/1:14,0:14:11.96:99,12,0	0/0:22,0:23:34.23:0,34,291	0/0:26,0:26:26.60:0,27,411	1/1:20,3:23:12.87:105,13,0	0/0:30,0:30:70.23:0,70,1136	0/0:23,0:23:59.65:0,60,878	1/1:10,0:9:5.99:48,6,0	1/1:8,0:8:12.39:88,12,0	0/1:18,0:17:30.62:31,0,159	0/0:25,0:24:2.77:0,3,97	0/0:40,0:36:21.90:0,22,128	0/0:29,0:29:9.56:0,10,159	0/0:25,0:25:23.98:0,24,266	0/0:21,1:22:13.04:0,13,272	1/1:21,0:21:2.99:25,3,0	1/1:25,0:25:50.92:346,51,0	0/1:23,0:23:31.08:31,0,138	1/1:6,0:5:14.96:120,15,0
chr10	48325432	.	CGTGT	C	1489.79	PASS	AB=1.000;AC=14;AF=0.280;AN=50;BaseQRankSum=3.518;DP=641;FS=0.000;HRun=0;HaplotypeScore=173.9460;InbreedingCoeff=0.5124;MQ=47.30;MQ0=14;MQRankSum=-3.736;QD=6.80;ReadPosRankSum=-0.642;VQSLOD=1.8813;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:26:44.86:0,45,880	0/0:6,0:6:12.04:0,12,276	./.	./.	0/0:18,0:17:0:0,0,0	0/0:32,0:34:53.80:0,54,965	0/0:22,0:24:43.38:0,43,695	1/1:15,21:35:59.43:539,59,0	0/0:27,0:27:60.12:0,60,1124	0/1:27,0:26:14.69:15,0,112	0/0:15,0:15:0:0,0,1	0/0:23,0:26:18.84:0,19,189	0/0:21,0:26:49.68:0,50,608	0/1:22,0:22:15.11:26,0,15	0/0:30,0:31:56.66:0,57,1089	0/0:24,0:24:20.14:0,20,895	./.	0/0:8,0:8:5.17:0,5,33	1/1:14,2:15:29.99:329,30,0	1/1:17,6:22:14.36:199,14,0	1/1:15,24:35:15.05:249,15,0	0/0:20,0:29:10.55:0,11,100	0/0:19,0:25:18.02:0,18,233	0/0:18,0:22:23.97:0,24,279	0/0:22,0:22:0:0,0,0	0/1:26,0:26:24.62:25,0,118	1/1:15,7:23:7.26:262,7,0	0/1:6,0:5:9.72:10,0,15
chr10	48325447	.	G	GTA	96.60	PASS	AB=0.974;AC=10;AF=0.179;AN=56;BaseQRankSum=6.129;DP=632;FS=6.697;HRun=0;HaplotypeScore=165.0828;InbreedingCoeff=0.2015;MQ=43.14;MQ0=16;MQRankSum=-2.078;QD=0.52;ReadPosRankSum=3.422;VQSLOD=1.9140;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:24:48.08:0,48,640	0/0:7,0:7:17.07:0,17,198	0/0:24,0:3:5.99:0,6,48	0/0:34,0:4:9.56:0,10,65	0/1:17,1:17:0:0,0,0	0/0:26,0:26:59.91:0,60,743	0/0:24,0:24:59.84:0,60,673	0/0:34,0:33:78.97:0,79,749	0/0:29,0:29:65.64:0,66,899	0/1:26,1:26:84.04:84,0,179	0/1:11,1:12:0.03:0,0,0	0/1:21,0:21:1.54:2,0,51	0/1:28,0:28:15.12:15,0,200	0/0:23,0:23:8.54:0,9,56	0/0:25,0:25:63.14:0,63,866	0/0:23,0:23:53.88:0,54,747	1/1:12,0:11:8.05:49,8,0	0/0:4,5:9:8.75:0,9,55	0/0:17,0:14:35.93:0,36,361	0/0:22,0:20:14.70:0,15,165	0/0:36,0:31:17.77:0,18,120	0/0:32,0:32:13.60:0,14,135	0/1:23,0:23:33.50:33,0,38	0/1:21,0:21:33.73:34,0,35	0/1:22,1:23:0:0,0,0	0/0:24,0:24:1.16:0,1,168	0/0:21,0:21:35.48:0,35,235	0/0:11,0:10:10.37:0,10,96
chr10	48325455	.	GTATGTATGTGTA	G	2130.88	PASS	AB=0.819;AC=13;AF=0.232;AN=56;BaseQRankSum=6.598;DP=615;FS=6.423;HRun=0;HaplotypeScore=218.9801;InbreedingCoeff=0.3226;MQ=42.65;MQ0=13;MQRankSum=-3.140;QD=12.91;ReadPosRankSum=-3.349;VQSLOD=1.4960;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:26:45.04:0,45,2076	0/0:7,0:7:4.60:0,5,765	0/0:22,0:4:5.59:0,6,212	0/0:35,0:9:26.96:0,27,549	0/0:5,15:19:0.47:0,0,1	0/0:23,0:23:37.76:0,38,2397	0/0:24,0:24:55.17:0,55,2217	0/0:37,0:36:74.69:0,75,1420	0/0:28,0:28:36.20:0,36,2292	0/1:7,15:22:56.54:623,0,57	0/0:3,7:10:0.94:0,1,2	0/1:23,0:23:22.25:22,0,329	0/0:26,0:27:23.75:0,24,1011	1/1:3,16:20:4.84:205,5,0	0/0:25,0:25:69.20:0,69,2476	0/0:25,0:25:60.17:0,60,2488	1/1:11,0:11:1.34:47,1,0	1/1:9,0:9:13.55:205,14,0	0/0:17,0:13:39.04:0,39,714	0/0:22,0:21:7.81:0,8,328	0/0:34,0:30:14.64:0,15,371	0/1:26,0:28:62.61:63,0,162	0/0:22,0:23:11.63:0,12,465	0/1:20,0:20:49.71:50,0,506	0/0:2,20:22:0.47:0,0,1	0/1:6,19:25:32.78:909,0,33	0/0:20,0:20:32.61:0,33,763	1/1:6,1:6:5.99:160,6,0
chr10	48325459	.	GTA	G	446.30	PASS	AB=0.979;AC=18;AF=0.321;AN=56;BaseQRankSum=7.666;DP=598;FS=0.000;HRun=0;HaplotypeScore=159.7483;InbreedingCoeff=0.2156;MQ=42.18;MQ0=12;MQRankSum=-3.881;QD=1.83;ReadPosRankSum=-0.963;VQSLOD=2.2731;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:23:43.20:0,43,744	0/0:7,0:7:11.86:0,12,275	0/0:22,0:4:8.06:0,8,121	0/0:37,0:10:29.77:0,30,468	0/1:20,0:19:0:0,0,0	0/0:23,0:23:50.58:0,51,899	0/0:23,0:23:54.18:0,54,966	0/0:37,1:37:12.95:0,13,728	0/0:25,0:25:47.06:0,47,821	0/1:18,2:20:64.68:93,0,65	0/0:10,0:10:0:0,0,0	0/1:21,0:21:31.69:32,0,54	0/1:26,0:26:37.17:37,0,303	1/1:19,0:19:5.46:34,5,0	0/0:27,0:27:54.07:0,54,973	0/0:25,0:25:57.14:0,57,1002	1/1:12,0:12:2.88:24,3,0	1/1:9,0:9:12.59:74,13,0	0/1:15,0:11:60.80:61,0,210	1/1:21,1:20:0.11:33,0,0	0/0:34,0:31:11.01:0,11,60	0/1:28,1:29:15.46:15,0,52	0/1:23,0:23:4.07:4,0,117	0/0:16,0:16:10.28:0,10,163	0/0:22,0:22:0:0,0,0	0/1:20,1:21:40.49:165,0,40	0/0:20,0:20:0.57:0,1,241	1/1:7,0:6:5.68:29,6,0
chr10	48325461	.	ATG	A	85.92	PASS	AB=0.971;AC=10;AF=0.179;AN=56;BaseQRankSum=5.005;DP=594;FS=5.032;HRun=0;HaplotypeScore=160.7052;InbreedingCoeff=0.1982;MQ=41.91;MQ0=12;MQRankSum=-2.051;QD=0.54;ReadPosRankSum=-0.510;VQSLOD=2.5905;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:25:42.60:0,43,714	0/0:7,0:7:14.04:0,14,248	0/0:22,0:4:7.27:0,7,113	0/0:37,0:10:29.80:0,30,457	0/1:20,0:19:0:0,0,0	0/0:22,0:22:47.80:0,48,828	0/0:22,0:22:54.14:0,54,936	0/0:36,0:35:61.48:0,61,1024	0/0:25,0:26:46.86:0,47,750	0/1:20,0:20:11.39:11,0,187	0/0:10,0:10:0:0,0,0	0/1:20,0:20:0.42:0,0,66	0/1:24,3:27:83.77:84,0,221	1/1:18,0:19:5.18:25,5,0	0/0:25,0:25:49.11:0,49,850	0/0:26,0:26:60.10:0,60,961	0/0:12,0:12:9.17:0,9,51	0/0:8,0:8:6.14:0,6,28	0/0:15,0:11:6.95:0,7,250	0/0:22,0:20:4.34:0,4,39	0/0:33,0:30:14.62:0,15,101	0/0:28,0:28:2.55:0,3,54	0/1:22,2:24:30.44:30,0,102	0/0:16,0:16:11.80:0,12,136	0/0:22,0:22:0:0,0,0	0/1:21,0:21:45.10:45,0,102	0/0:20,0:20:21.89:0,22,296	1/1:7,0:6:0.15:10,0,0
chr10	48325465	.	GTA	G	454.71	PASS	AB=0.987;AC=18;AF=0.321;AN=56;BaseQRankSum=7.651;DP=585;FS=0.000;HRun=0;HaplotypeScore=156.1665;InbreedingCoeff=0.1672;MQ=41.79;MQ0=10;MQRankSum=-2.588;QD=1.78;ReadPosRankSum=-1.623;VQSLOD=2.4087;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:25:25.71:0,26,576	0/0:7,0:7:7.97:0,8,185	0/1:22,0:4:3.10:3,0,98	0/0:37,0:10:29.99:0,30,430	0/1:19,0:19:0:0,0,0	0/0:25,0:25:47.70:0,48,628	0/0:23,0:23:56.63:0,57,818	0/0:32,0:31:41.24:0,41,717	0/0:22,1:23:25.15:0,25,515	0/1:20,0:20:34.48:91,0,34	0/0:10,0:10:0:0,0,0	0/1:20,1:21:24.36:24,0,48	0/1:26,0:26:26.59:27,0,186	1/1:18,1:19:5.55:43,6,0	0/0:24,0:24:19.84:0,20,568	0/0:28,0:28:57.55:0,58,794	1/1:13,0:13:2.89:25,3,0	1/1:7,0:7:6.20:31,6,0	0/1:15,0:12:76.68:77,0,119	0/1:22,0:20:2.28:26,0,2	0/0:30,0:27:10.85:0,11,78	0/0:26,0:26:2.55:0,3,45	0/1:21,2:23:4.89:5,0,78	0/0:16,0:16:3.50:0,3,110	0/0:22,0:22:0:0,0,0	0/1:21,0:21:7.98:212,0,8	0/1:20,0:20:7.45:7,0,152	1/1:7,0:6:5.81:34,6,0
chr10	48325476	.	TGAGAGAGA	T	638.85	PASS	AB=0.931;AC=18;AF=0.375;AN=48;BaseQRankSum=5.580;DP=555;FS=16.326;HRun=0;HaplotypeScore=179.1621;InbreedingCoeff=0.2664;MQ=41.87;MQ0=8;MQRankSum=-5.344;QD=2.88;ReadPosRankSum=0.554;VQSLOD=1.6647;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:29:10.28:0,10,270	0/0:7,0:7:9.01:0,9,162	./.	./.	0/1:23,0:23:29.88:52,0,30	0/0:19,0:22:17.29:0,17,342	0/0:23,0:25:27.06:0,27,650	0/0:30,0:30:0:0,0,0	0/0:23,1:25:32.41:0,32,903	0/1:20,0:20:36.16:50,0,36	./.	1/1:13,3:23:2.88:56,3,0	1/1:15,5:21:6.73:149,7,0	1/1:16,0:17:0.47:1,0,0	0/0:20,0:21:21.05:0,21,594	0/0:24,0:28:30.09:0,30,851	0/1:12,0:12:36.67:37,0,60	0/0:6,0:6:5.98:0,6,66	1/1:9,0:12:6.02:112,6,0	0/0:17,0:21:0.25:0,0,0	0/1:20,0:21:0:0,0,0	1/1:16,6:24:1.37:3,1,0	0/0:18,3:22:0:0,0,0	./.	0/0:19,0:20:5.24:0,5,20	0/1:20,0:20:32.21:32,0,159	1/1:11,0:19:11.37:222,11,0	0/1:4,4:7:34.30:63,0,34
chr10	48326648	.	A	AG	3588.41	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-9.070;DP=640;FS=2.941;HRun=7;HaplotypeScore=89.7245;InbreedingCoeff=0.9983;MQ=81.69;MQ0=0;MQRankSum=-1.171;QD=29.17;ReadPosRankSum=-1.679;VQSLOD=3.3120;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:43:99:0,111,1064	0/0:10,0:10:24:0,24,223	0/0:21,0:21:51.04:0,51,480	0/0:15,0:15:30.04:0,30,289	0/0:15,0:15:33.05:0,33,318	0/0:23,0:23:57.08:0,57,550	0/0:26,0:26:69.07:0,69,654	1/1:2,23:25:69.17:806,69,0	0/0:23,0:23:66.11:0,66,637	0/0:17,0:17:36.05:0,36,347	0/0:19,0:19:48.05:0,48,463	0/0:28,0:28:78.12:0,78,753	0/0:26,0:26:66.10:0,66,637	0/0:24,0:24:48.08:0,48,463	0/0:31,0:31:90.14:0,90,869	0/0:21,0:21:60.10:0,60,579	0/0:24,0:24:54.08:0,54,521	0/0:20,0:20:39.06:0,39,376	1/1:5,15:20:54.15:630,54,0	1/1:1,8:9:24.07:287,24,0	1/1:5,39:44:99:1178,99,0	0/0:22,0:23:62.13:0,62,585	0/0:24,0:24:63.10:0,63,608	0/0:31,0:31:78.12:0,78,753	0/0:17,0:17:42.07:0,42,405	0/0:25,0:25:69.11:0,69,666	1/1:3,22:25:57.17:687,57,0	0/0:10,0:10:24.04:0,24,232
chr10	48326711	.	GTGCTGAC	G	6443.20	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=6.918;DP=624;FS=8.710;HRun=0;HaplotypeScore=154.1257;InbreedingCoeff=0.5655;MQ=84.50;MQ0=0;MQRankSum=-8.120;QD=24.31;ReadPosRankSum=-1.364;VQSLOD=3.7478;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,108,3248	0/0:4,0:4:12.04:0,12,362	0/0:28,0:28:69.23:0,69,1368	0/0:20,0:20:21.50:0,22,959	1/1:2,11:12:11.79:191,12,0	0/0:18,0:18:36.12:0,36,1085	0/0:36,0:36:99:0,99,3130	0/1:20,0:20:31.89:418,0,32	0/0:25,0:25:75.26:0,75,2434	1/1:4,21:25:51.14:1158,51,0	1/1:2,6:8:2.54:74,3,0	0/0:33,0:33:93.32:0,93,3352	0/0:24,0:24:60.21:0,60,2061	1/1:3,29:32:50.92:1257,51,0	0/0:32,0:32:93.30:0,93,2744	0/0:24,0:24:66.21:0,66,2043	1/1:3,22:25:24.08:584,24,0	1/1:0,15:15:15.05:360,15,0	0/1:17,0:13:57.25:354,0,57	0/1:10,0:10:99:152,0,131	0/1:38,0:37:99:138,0,699	0/0:18,0:18:48.15:0,48,1415	0/0:13,0:13:33.11:0,33,748	0/0:44,0:44:99:0,117,4051	1/1:3,8:11:6.02:135,6,0	1/1:5,21:26:57.09:1210,57,0	0/1:18,0:17:99:189,0,412	1/1:1,6:7:9.03:225,9,0
chr10	48326718	.	C	CGG	6014.80	PASS	AB=1.000;AC=20;AF=0.357;AN=56;BaseQRankSum=-1.745;DP=576;FS=0.803;HRun=0;HaplotypeScore=93.2553;InbreedingCoeff=0.6594;MQ=85.05;MQ0=0;MQRankSum=-2.488;QD=26.97;ReadPosRankSum=-4.313;VQSLOD=4.1101;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,108,1734	0/0:4,0:4:12.04:0,12,196	0/0:24,0:24:72.23:0,72,1091	0/0:22,0:22:27.54:0,28,811	1/1:12,0:11:4.15:109,4,0	0/0:13,0:13:36.12:0,36,584	0/0:36,0:36:99:0,108,1735	1/1:0,17:18:54.09:980,54,0	0/0:26,0:26:75.26:0,75,1221	1/1:21,0:21:0.52:510,1,0	0/0:6,0:6:2.22:0,2,7	0/0:31,0:31:93.32:0,93,1517	0/0:23,0:23:63.22:0,63,1027	0/1:29,0:29:59.23:62,0,59	0/0:31,0:31:93.30:0,93,1490	0/0:23,0:23:69.22:0,69,1097	0/1:22,0:22:20.06:47,0,20	0/1:15,0:15:0.63:97,0,1	1/1:1,14:11:30.10:582,30,0	1/1:2,8:10:24.07:440,24,0	1/1:9,28:36:90.14:1623,90,0	0/0:16,0:16:48.15:0,48,758	0/0:13,0:13:39.13:0,39,633	0/0:42,0:42:99:0,126,2029	0/1:8,0:8:1.84:55,0,2	1/1:21,0:22:20.93:658,21,0	1/1:0,14:13:42.14:851,42,0	0/0:6,0:6:6.66:0,7,21
chr10	48330236	.	C	CATGT	10067.63	PASS	AB=0.778;AC=29;AF=0.558;AN=52;BaseQRankSum=-8.313;DP=832;FS=9.027;HRun=0;HaplotypeScore=145.9714;InbreedingCoeff=0.7304;MQ=67.60;MQ0=4;MQRankSum=-2.199;QD=20.63;ReadPosRankSum=-1.348;VQSLOD=4.0628;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:51.11:0,51,720	0/0:10,0:10:21.05:0,21,302	./.	./.	1/1:13,16:29:33.11:775,33,0	0/0:31,0:31:54.15:0,54,790	0/1:24,0:24:6.76:7,0,471	1/1:56,0:56:18.02:262,18,0	0/0:27,0:27:54.15:0,54,781	1/1:14,23:37:75.26:1651,75,0	1/1:7,15:22:39.13:915,39,0	0/0:24,0:24:42.14:0,42,649	0/0:44,0:44:93.30:0,93,1415	0/1:15,11:29:8.36:588,0,8	0/0:35,0:36:9.63:0,10,1091	1/1:14,24:38:56.96:1338,57,0	1/1:12,12:23:21.07:471,21,0	1/1:10,15:25:6.22:570,6,0	1/1:17,0:20:5.69:64,6,0	0/1:17,0:35:10.27:515,0,10	1/1:22,0:22:6.02:67,6,0	0/0:20,0:20:36.11:0,36,530	0/0:26,0:26:42.14:0,42,649	0/0:26,0:26:30.08:0,30,440	1/1:13,11:24:21.07:493,21,0	1/1:17,25:43:78.27:1800,78,0	1/1:35,1:46:21.07:342,21,0	1/1:6,4:11:9.03:211,9,0
chr10	48330279	.	G	GTA	1106.26	PASS	AB=0.980;AC=12;AF=0.214;AN=56;BaseQRankSum=18.129;DP=830;FS=13.637;HRun=0;HaplotypeScore=132.5671;InbreedingCoeff=-0.2769;MQ=68.16;MQ0=2;MQRankSum=-0.908;QD=3.08;ReadPosRankSum=2.977;VQSLOD=1.9288;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:96.78:0,97,1431	0/0:12,0:12:36.11:0,36,528	0/0:20,0:18:54.16:0,54,782	0/0:25,0:21:60.20:0,60,908	0/1:35,0:34:68.08:68,0,776	0/0:33,0:33:96.33:0,96,1467	0/0:24,0:24:72.24:0,72,1089	0/0:43,0:43:43.91:0,44,1629	0/0:32,0:32:90.29:0,90,1351	0/1:46,0:46:99:223,0,832	0/1:27,0:27:99:112,0,476	0/0:25,0:25:72.24:0,72,1101	0/0:39,0:39:99:0,114,1742	0/1:24,0:24:59.89:60,0,397	0/0:37,0:37:92.46:0,92,1546	0/1:36,0:36:99:187,0,372	0/1:24,0:23:37.81:38,0,366	0/1:26,0:26:67.31:67,0,421	0/1:17,0:15:44.34:44,0,524	0/1:36,0:36:99:138,0,630	0/1:20,9:29:28.37:28,0,512	0/0:31,0:31:87.27:0,87,1304	0/0:28,0:28:78.26:0,78,1172	0/0:25,0:25:59.86:0,60,891	0/1:21,0:21:52.67:53,0,363	0/1:38,0:38:99:240,0,399	0/0:38,0:38:9.27:0,9,955	0/0:21,0:21:13.99:0,14,689
chr10	48331253	.	TACACACACACACACACACACAC	T	2818.37	PASS	AC=16;AF=0.296;AN=54;BaseQRankSum=3.787;DP=447;FS=13.748;HRun=0;HaplotypeScore=216.8800;InbreedingCoeff=0.7734;MQ=53.76;MQ0=15;MQRankSum=-2.267;QD=22.73;ReadPosRankSum=-1.750;VQSLOD=1.0797;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:33:51.15:0,51,2322	0/0:3,0:4:4.57:0,5,191	0/0:47,0:20:6.02:0,6,257	0/0:47,0:18:12.93:0,13,555	1/1:16,7:21:15.48:541,15,0	0/0:8,0:10:18.06:0,18,1377	0/0:18,0:18:21.54:0,22,1234	0/0:20,0:20:15.04:0,15,414	0/0:4,0:4:3.01:0,3,297	1/1:12,2:14:18.04:486,18,0	1/1:9,2:11:6.02:347,6,0	0/0:9,0:11:15.05:0,15,434	0/0:3,0:3:9.03:0,9,313	1/1:10,2:12:9.03:411,9,0	0/0:15,0:15:21.07:0,21,1287	0/0:8,0:8:9.02:0,9,596	1/1:17,1:18:6.02:237,6,0	1/1:18,2:20:9.08:364,9,0	0/0:13,0:13:21.07:0,21,1472	0/0:9,0:11:18.05:0,18,398	0/0:26,0:25:15.04:0,15,969	0/0:6,0:6:9.03:0,9,187	0/0:10,0:9:8.59:0,9,421	0/0:17,0:20:18.05:0,18,475	1/1:9,3:12:9.03:514,9,0	1/1:13,1:11:3:96,3,0	0/0:11,0:10:17.07:0,17,959	./.
chr10	48331319	.	TG	T	4694.82	PASS	AB=1.000;AC=20;AF=0.357;AN=56;BaseQRankSum=6.251;DP=429;FS=6.792;HRun=1;HaplotypeScore=76.3228;InbreedingCoeff=0.8329;MQ=63.83;MQ0=2;MQRankSum=-3.940;QD=24.71;ReadPosRankSum=-1.181;VQSLOD=4.0535;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:93.26:0,93,1187	0/0:5,0:5:15.01:0,15,159	0/1:30,0:17:11.89:12,0,273	0/0:18,0:11:8.45:0,8,183	1/1:5,15:18:37.87:557,38,0	0/0:11,0:11:30.07:0,30,390	0/0:13,0:13:39.11:0,39,502	0/0:18,0:18:54.12:0,54,667	0/0:10,0:10:25.21:0,25,314	1/1:1,20:21:57.08:725,57,0	1/1:1,12:13:36.09:474,36,0	0/0:10,0:10:27.27:0,27,179	0/1:7,0:6:26.06:26,0,50	1/1:0,13:13:30.10:401,30,0	0/0:15,0:15:42.04:0,42,518	0/0:12,0:12:33.07:0,33,413	1/1:1,24:25:54.16:720,54,0	1/1:1,20:21:48.06:618,48,0	0/0:16,0:15:39.39:0,39,459	0/0:14,0:14:41.86:0,42,457	0/0:13,0:13:26.45:0,26,322	0/0:10,0:10:26.43:0,26,159	0/0:13,0:13:29.23:0,29,179	0/0:24,0:24:38.51:0,39,280	1/1:5,12:17:44.29:538,44,0	1/1:0,15:14:36.07:459,36,0	0/0:6,0:6:18.06:0,18,238	1/1:2,6:5:14.99:167,15,0
chr10	48331320	.	G	GT	1143.16	PASS	AB=0.870;AC=11;AF=0.196;AN=56;BaseQRankSum=-6.339;DP=437;FS=0.000;HRun=10;HaplotypeScore=92.1112;InbreedingCoeff=0.7197;MQ=63.84;MQ0=2;MQRankSum=1.098;QD=10.78;ReadPosRankSum=0.678;VQSLOD=2.9874;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:86.86:0,87,709	0/0:5,0:5:8.97:0,9,74	0/1:28,0:16:10.17:10,0,95	0/0:16,0:9:16.22:0,16,101	0/0:20,0:18:24.46:0,24,80	0/0:12,0:12:23.92:0,24,197	0/0:14,0:14:35.94:0,36,296	0/0:18,0:18:44.92:0,45,366	0/0:9,0:10:25.95:0,26,194	0/0:22,0:22:25.50:0,26,68	0/0:12,0:13:18.92:0,19,51	0/1:4,7:11:3.55:171,0,4	1/1:2,5:6:17.99:171,18,0	0/0:13,0:13:17.81:0,18,51	0/0:17,0:17:35.94:0,36,295	0/0:12,0:12:29.91:0,30,240	0/0:26,0:26:28.90:0,29,79	0/0:21,0:21:21.77:0,22,59	0/0:16,0:15:32.93:0,33,267	0/0:14,0:14:35.94:0,36,295	0/0:11,0:12:23.01:0,23,178	1/1:0,10:10:27.07:288,27,0	1/1:2,11:13:27.07:288,27,0	1/1:5,19:24:36.01:369,36,0	0/0:17,0:17:23.70:0,24,69	0/0:15,0:14:15.53:0,16,42	0/0:6,0:6:17.98:0,18,148	0/1:13,0:10:4.47:16,0,4
chr10	48331438	.	G	GA	791.07	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-1.350;DP=509;FS=10.827;HRun=10;HaplotypeScore=79.1984;InbreedingCoeff=0.8311;MQ=52.63;MQ0=28;MQRankSum=0.181;QD=14.93;ReadPosRankSum=0.303;VQSLOD=2.8757;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:28:74.73:0,75,603	0/0:6,0:6:16.95:0,17,120	0/0:48,0:13:3.88:0,4,64	0/0:63,0:8:4.54:0,5,30	0/0:29,0:29:29.03:0,29,232	0/0:14,0:13:38.55:0,39,306	0/0:8,0:8:14.28:0,14,142	0/0:14,0:10:23.96:0,24,194	0/0:5,0:5:8.64:0,9,74	0/0:19,0:19:37.47:0,37,225	0/0:22,0:22:35.41:0,35,215	1/1:5,3:8:16.85:161,17,0	1/1:7,2:8:14.75:131,15,0	0/0:6,0:6:8.82:0,9,54	0/0:19,0:19:41.93:0,42,343	0/0:16,0:16:29.69:0,30,224	0/0:24,0:24:27.43:0,27,213	0/0:12,0:10:5.84:0,6,40	0/0:18,0:11:26.95:0,27,221	0/0:14,1:15:9.96:0,10,288	0/0:8,0:7:14.98:0,15,123	1/1:2,2:4:6.01:59,6,0	1/1:11,9:17:42.10:445,42,0	1/1:9,2:10:15.04:160,15,0	0/0:18,0:18:25.48:0,25,164	0/0:19,0:17:23.83:0,24,204	0/0:27,0:25:59.87:0,60,482	0/0:15,0:14:19.27:0,19,108
chr10	48331448	.	ACAAAAAAC	A	4653.17	PASS	AB=0.979;AC=16;AF=0.286;AN=56;BaseQRankSum=11.116;DP=490;FS=0.925;HRun=0;HaplotypeScore=111.0600;InbreedingCoeff=0.4684;MQ=52.79;MQ0=24;MQRankSum=-8.311;QD=22.26;ReadPosRankSum=1.323;VQSLOD=3.8558;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:30:86.73:0,87,2831	0/0:6,0:6:5.57:0,6,371	0/0:41,0:11:8.35:0,8,119	0/1:52,0:10:15.21:15,0,137	1/1:25,1:26:34.27:1069,34,0	0/0:14,0:13:39.13:0,39,1472	0/0:7,0:7:14.14:0,14,615	0/0:20,0:17:46.54:0,47,1174	0/0:6,0:6:15.52:0,16,523	0/1:17,1:18:0.03:712,0,0	0/1:19,0:19:6.23:576,0,6	0/0:9,0:9:23.66:0,24,503	0/0:11,0:9:21:0,21,409	1/1:4,0:4:9.03:195,9,0	0/0:18,0:18:47.99:0,48,1587	0/0:15,0:15:27.22:0,27,994	0/1:25,0:26:26.36:616,0,26	1/1:11,0:9:5.97:80,6,0	0/0:21,0:16:45.15:0,45,1457	0/0:17,0:17:51.07:0,51,1595	0/0:9,0:8:18.06:0,18,629	0/1:4,0:4:4.24:4,0,185	0/0:17,0:15:34.41:0,34,1302	0/0:9,0:8:15.05:0,15,453	1/1:14,1:15:3.04:472,3,0	0/1:19,0:17:26.36:456,0,26	0/0:25,0:25:65.31:0,65,1981	1/1:10,1:10:22.32:457,22,0
chr10	48331449	.	CAAAAAACA	C	6189.07	PASS	AB=0.966;AC=19;AF=0.339;AN=56;BaseQRankSum=7.696;DP=487;FS=7.803;HRun=0;HaplotypeScore=106.4622;InbreedingCoeff=0.8812;MQ=52.94;MQ0=24;MQRankSum=-7.812;QD=30.34;ReadPosRankSum=0.992;VQSLOD=4.1230;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:29:82.83:0,83,2916	0/0:6,0:6:13.28:0,13,405	0/0:42,0:11:11.43:0,11,184	0/1:53,0:10:4.78:5,0,158	1/1:6,20:26:54.15:1310,54,0	0/0:14,0:13:39.13:0,39,1563	0/0:7,0:7:15.05:0,15,633	0/0:19,0:17:42.12:0,42,1259	0/0:7,0:7:18.53:0,19,606	1/1:2,15:17:48.15:1021,48,0	1/1:4,15:19:33.11:768,33,0	0/0:9,0:9:24.07:0,24,644	0/0:12,0:10:24.08:0,24,583	1/1:0,4:4:9.03:241,9,0	0/0:18,0:18:45.15:0,45,1679	0/0:15,0:15:30.03:0,30,1056	1/1:5,21:26:36.08:851,36,0	1/1:0,11:9:5.93:118,6,0	0/0:21,0:16:45.15:0,45,1565	0/0:18,0:18:51.17:0,51,1694	0/0:9,0:8:18.06:0,18,635	0/0:4,0:4:6.02:0,6,233	0/0:17,0:15:45.14:0,45,1640	0/0:9,0:8:15.05:0,15,546	1/1:2,13:15:24.08:618,24,0	1/1:7,12:17:34.87:673,35,0	0/0:23,0:23:54.18:0,54,2043	1/1:3,8:10:24.07:583,24,0
chr10	48331456	.	CA	C	1027.04	PASS	AB=0.971;AC=19;AF=0.339;AN=56;BaseQRankSum=12.360;DP=457;FS=7.329;HRun=9;HaplotypeScore=74.7304;InbreedingCoeff=0.8654;MQ=53.21;MQ0=17;MQRankSum=-7.709;QD=6.26;ReadPosRankSum=2.100;VQSLOD=0.9154;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:35:90.25:0,90,1028	0/0:5,0:5:9.03:0,9,103	0/1:32,0:10:1.71:2,0,66	0/0:49,0:11:6.44:0,6,58	1/1:21,2:23:47.88:271,48,0	0/0:13,0:13:36.11:0,36,415	0/0:7,0:7:21.06:0,21,240	0/0:21,0:20:54.13:0,54,611	0/0:7,0:7:17.72:0,18,207	1/1:16,0:16:32.91:240,33,0	1/1:16,0:16:22.69:133,23,0	0/0:8,0:9:17.92:0,18,188	0/0:13,0:12:26.88:0,27,266	1/1:4,0:4:8.23:37,8,0	0/0:18,0:18:44.49:0,44,490	0/0:13,0:13:27.08:0,27,312	1/1:21,1:22:31.05:165,31,0	1/1:11,0:9:2.74:12,3,0	0/0:23,0:19:57.15:0,57,644	0/0:19,0:19:51.14:0,51,580	0/0:10,0:9:21.05:0,21,232	0/0:3,0:3:6.02:0,6,69	0/0:18,0:17:48.13:0,48,544	0/0:8,0:7:15.04:0,15,170	1/1:14,0:14:19.20:86,19,0	1/1:13,1:13:28.43:175,28,0	0/0:20,0:20:51.15:0,51,587	1/1:11,0:10:19.69:108,20,0
chr10	48332484	.	GC	G	6760.64	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=8.125;DP=653;FS=7.220;HRun=4;HaplotypeScore=75.9027;InbreedingCoeff=0.9854;MQ=89.43;MQ0=0;MQRankSum=-3.237;QD=31.74;ReadPosRankSum=2.349;VQSLOD=5.4687;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,132,1802	0/0:8,0:8:24.08:0,24,336	0/0:34,0:34:90.46:0,90,1271	0/0:23,0:23:66.19:0,66,864	1/1:2,30:32:87.27:1042,87,0	0/0:21,0:21:51.17:0,51,714	0/0:23,0:23:66.18:0,66,872	1/1:2,15:17:45.10:507,45,0	0/0:20,0:20:60.20:0,60,840	1/1:1,21:22:63.19:756,63,0	1/1:0,19:19:51.16:609,51,0	0/0:20,0:20:60.20:0,60,838	0/0:28,0:28:84.28:0,84,1175	1/1:2,16:18:6.51:498,7,0	0/0:35,0:35:96.26:0,96,1272	0/0:19,0:19:57.19:0,57,798	1/1:0,28:28:81.25:972,81,0	1/1:1,17:18:45.14:540,45,0	0/0:16,0:16:48.14:0,48,631	0/0:36,0:36:99:0,102,1428	0/0:23,0:23:60.16:0,60,818	0/0:15,0:15:42.12:0,42,555	0/0:20,0:20:60.20:0,60,839	0/0:25,0:25:75.24:0,75,1033	1/1:1,22:23:57.17:684,57,0	1/1:3,19:22:54.16:648,54,0	0/0:27,0:27:81.27:0,81,1133	1/1:0,14:14:42.13:504,42,0
chr10	48334589	.	AG	A	9503.42	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=13.871;DP=630;FS=2.104;HRun=1;HaplotypeScore=63.6469;InbreedingCoeff=0.9986;MQ=89.85;MQ0=0;MQRankSum=-7.566;QD=38.48;ReadPosRankSum=2.838;VQSLOD=5.5809;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,99,1556	0/0:6,0:6:18.06:0,18,288	0/0:23,0:23:69.17:0,69,1028	0/0:25,0:25:72.24:0,72,1122	0/0:19,0:19:54.18:0,54,863	0/0:13,0:13:36.12:0,36,575	0/0:23,0:23:69.24:0,69,1092	1/1:0,28:28:84.27:1158,84,0	0/0:22,0:22:63.21:0,63,1007	0/0:12,0:12:36.12:0,36,555	0/0:17,0:17:48.13:0,48,720	1/1:0,26:26:69.21:964,69,0	1/1:0,24:24:66.21:923,66,0	0/0:27,0:27:78.27:0,78,1244	0/0:22,0:22:66.19:0,66,1008	0/0:34,0:34:99:0,99,1580	0/0:34,0:34:99:0,102,1630	0/0:18,0:18:54.18:0,54,859	1/1:0,21:21:63.16:829,63,0	1/1:0,28:28:80.90:1078,81,0	1/1:1,34:35:99:1362,99,0	1/1:0,28:28:78.26:1091,78,0	1/1:0,10:10:30.10:420,30,0	1/1:0,27:27:78.26:1091,78,0	0/0:15,0:15:45.15:0,45,719	0/0:28,0:28:81.26:0,81,1254	1/1:0,20:20:42.14:587,42,0	0/0:11,0:11:30.09:0,30,456
chr10	48335681	.	TA	T	10083.63	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=9.170;DP=680;FS=3.526;HRun=11;HaplotypeScore=75.5214;InbreedingCoeff=0.9646;MQ=74.61;MQ0=0;MQRankSum=0.088;QD=18.92;ReadPosRankSum=2.783;VQSLOD=6.0259;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:60.09:0,60,618	0/0:12,0:12:30.08:0,30,320	0/0:14,0:14:17.87:0,18,166	0/0:18,1:18:17.74:0,18,151	1/1:0,46:47:99:933,116,0	1/1:2,20:22:50.94:419,51,0	1/1:3,19:22:47.94:394,48,0	1/1:3,25:29:47.94:587,48,0	0/0:20,1:21:20.45:0,20,409	1/1:6,22:29:67.92:541,68,0	1/1:3,20:23:47.87:388,48,0	1/1:3,28:31:62.91:517,63,0	1/1:2,29:31:68.92:567,69,0	1/1:2,19:21:50.80:419,51,0	0/0:31,1:32:59.51:0,60,814	0/0:22,0:22:62.98:0,63,643	1/1:6,26:33:73.93:597,74,0	1/1:2,20:22:53.92:443,54,0	1/1:0,20:21:61.91:487,62,0	1/1:4,15:20:37.90:293,38,0	1/1:3,12:15:32.96:271,33,0	1/1:0,18:18:47.92:394,48,0	1/1:7,29:38:84.57:676,85,0	1/1:0,20:21:58.97:474,59,0	1/1:2,20:22:50.94:419,51,0	1/1:2,20:24:63.98:501,64,0	1/1:4,36:40:89.89:739,90,0	1/1:4,0:4:2.98:25,3,0
chr10	48336009	.	G	GAAACA	12387.47	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=-12.333;DP=737;FS=0.727;HRun=0;HaplotypeScore=126.0280;InbreedingCoeff=0.9480;MQ=66.20;MQ0=0;MQRankSum=-2.186;QD=47.64;ReadPosRankSum=0.535;VQSLOD=4.8840;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:57:99:0,123,2214	0/0:12,0:12:24.07:0,24,393	0/1:25,0:21:1.38:1,0,549	0/0:26,0:18:18.08:0,18,292	1/1:8,27:36:87.29:2380,87,0	0/0:23,0:23:48.15:0,48,861	0/0:21,0:21:42.12:0,42,766	0/0:39,0:39:81.24:0,81,1406	0/0:22,0:22:36.10:0,36,636	1/1:14,14:31:66.11:1606,66,0	1/1:4,15:21:48.16:1333,48,0	0/0:22,0:22:51.17:0,51,964	0/0:25,0:25:66.21:0,66,1207	1/1:7,20:27:42.14:1214,42,0	0/0:26,0:26:63.22:0,63,1188	0/0:23,0:23:48.16:0,48,872	1/1:8,26:35:66.23:1906,66,0	1/1:5,10:16:27.09:779,27,0	0/0:13,0:13:15.05:0,15,286	0/0:27,0:27:57.16:0,57,982	0/0:23,0:23:63.20:0,63,1153	0/0:25,0:25:60.21:0,60,1115	0/0:22,0:22:60.19:0,60,1097	0/0:36,0:36:84.29:0,84,1600	1/1:9,22:35:51.17:1473,51,0	1/1:8,13:21:45.12:1175,45,0	0/0:35,0:35:66.22:0,66,1217	1/1:6,6:11:18.06:520,18,0
chr10	48337487	.	T	TGACA	11473.98	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-14.943;DP=557;FS=8.034;HRun=0;HaplotypeScore=87.0309;InbreedingCoeff=0.9966;MQ=85.66;MQ0=3;MQRankSum=-5.475;QD=61.69;ReadPosRankSum=3.442;VQSLOD=6.6290;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:93.32:0,93,1735	0/0:6,0:6:18.05:0,18,306	0/0:29,0:29:59.37:0,59,1094	0/0:15,0:15:32.28:0,32,605	1/1:2,22:25:54.19:1434,54,0	0/0:20,0:20:57.18:0,57,1031	0/0:17,0:17:51.17:0,51,945	0/0:23,0:23:60.20:0,60,1084	0/0:18,0:18:45.14:0,45,807	1/1:1,17:18:54.19:1433,54,0	1/1:4,16:21:39.13:1026,39,0	0/0:21,0:21:60.21:0,60,1119	0/0:22,0:22:63.20:0,63,1144	1/1:2,12:15:39.13:1032,39,0	0/0:23,0:23:69.21:0,69,1226	0/0:17,0:17:48.16:0,48,874	1/1:5,33:40:87.30:2319,87,0	1/1:1,11:10:27.09:720,27,0	0/0:14,0:14:36.11:0,36,642	0/0:21,0:21:60.21:0,60,1113	0/0:23,0:23:69.22:0,69,1255	0/0:7,0:7:18.06:0,18,329	0/0:21,0:21:60.21:0,60,1120	0/0:23,0:23:66.23:0,66,1232	1/1:3,24:26:60.21:1591,60,0	1/1:2,16:19:51.18:1358,51,0	0/0:20,0:19:54.17:0,54,976	1/1:2,7:9:21.07:560,21,0
chr10	48337647	.	C	CA	1841.02	PASS	AB=0.710;AC=31;AF=0.554;AN=56;BaseQRankSum=-2.193;DP=439;FS=1.823;HRun=15;HaplotypeScore=70.1305;InbreedingCoeff=0.0900;MQ=78.12;MQ0=2;MQRankSum=-0.109;QD=5.65;ReadPosRankSum=-1.179;VQSLOD=2.3239;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,1:23:18.31:0,18,181	0/1:5,1:6:10.44:10,0,57	0/0:31,0:17:3.07:0,3,35	0/1:19,0:10:0.79:9,0,1	0/1:9,8:16:12.16:113,0,12	0/0:13,0:13:14.42:0,14,88	0/0:6,0:7:10.76:0,11,60	0/1:11,12:23:19.45:234,0,19	0/0:7,0:8:13.62:0,14,77	1/1:8,7:15:14.89:116,15,0	0/1:10,12:23:21.69:128,0,22	1/1:6,8:15:12.58:71,13,0	1/1:3,1:10:4.09:17,4,0	0/1:4,5:9:24.03:39,0,24	0/0:13,1:19:0.39:0,0,87	0/0:12,0:12:17.39:0,17,106	0/1:12,17:30:42.24:107,0,42	1/1:6,2:9:14.78:104,15,0	1/1:8,12:20:23.22:244,23,0	1/1:9,17:27:29.79:225,30,0	1/1:0,4:4:5.99:50,6,0	1/1:2,0:2:2.99:23,3,0	1/1:4,1:8:5.58:39,6,0	1/1:1,1:7:5.82:37,6,0	0/1:9,11:20:18.50:50,0,18	0/1:15,5:23:27.24:100,0,27	0/1:10,6:16:42.65:75,0,43	0/1:8,10:20:9.56:225,0,10
chr10	48341896	.	G	GGCATAACAGGGCCTAATGCCGCTTA	29466.29	PASS	AB=0.742;AC=52;AF=0.963;AN=54;BaseQRankSum=1.059;DP=264;FS=41.308;HRun=0;HaplotypeScore=360.3607;InbreedingCoeff=-0.0641;MQ=68.00;MQ0=0;MQRankSum=-3.138;QD=111.61;ReadPosRankSum=2.776;VQSLOD=3.4137;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:11:18.06:1184,18,0	1/1:5,0:5:3.01:217,3,0	0/1:7,1:10:29.02:1811,0,29	0/1:3,0:5:38.91:490,0,39	1/1:11,0:11:21.07:1184,21,0	1/1:7,0:7:18.06:1021,18,0	1/1:4,0:4:9.03:559,9,0	1/1:9,0:9:18.06:1021,18,0	1/1:10,0:10:24.08:1296,24,0	1/1:14,0:14:33.09:1758,33,0	1/1:11,0:11:24.08:1227,24,0	1/1:10,0:10:18.05:965,18,0	1/1:13,0:13:21.07:1048,21,0	1/1:9,0:9:12.04:696,12,0	1/1:16,0:16:30.10:1768,30,0	1/1:14,0:14:27.09:1341,27,0	1/1:6,0:6:12.04:694,12,0	1/1:8,0:8:18.06:1088,18,0	1/1:3,0:3:9.03:440,9,0	1/1:21,0:21:43.70:2258,44,0	1/1:2,0:2:3.01:71,3,0	1/1:10,0:10:9.03:483,9,0	1/1:11,0:11:21.07:1040,21,0	1/1:7,0:7:18.06:1095,18,0	1/1:10,0:10:21.04:1072,21,0	1/1:10,0:10:27.09:1680,27,0	1/1:17,0:17:33.11:1960,33,0	./.
chr10	48345806	.	G	GA	7084.29	PASS	AB=0.967;AC=41;AF=0.732;AN=56;BaseQRankSum=-2.658;DP=594;FS=0.000;HRun=11;HaplotypeScore=76.0820;InbreedingCoeff=0.6560;MQ=79.69;MQ0=5;MQRankSum=-1.097;QD=14.08;ReadPosRankSum=1.007;VQSLOD=5.1487;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:14,1:15:1:0,1,183	0/0:5,0:5:11.95:0,12,92	0/1:46,0:28:2.60:3,0,193	0/1:26,0:17:19.76:20,0,109	1/1:7,30:38:89.86:856,90,0	0/0:27,0:27:65.73:0,66,511	0/0:14,0:14:2.47:0,2,202	1/1:6,2:21:37.66:205,38,0	0/1:16,2:18:14.80:15,0,259	1/1:6,19:25:60.09:597,60,0	1/1:9,21:30:13.57:480,14,0	1/1:3,12:16:9.66:265,10,0	1/1:4,10:14:21.04:213,21,0	1/1:1,18:20:38.91:380,39,0	0/0:17,0:17:12.10:0,12,188	0/0:13,0:13:32.85:0,33,255	1/1:2,21:24:39.72:570,40,0	1/1:4,15:20:47.97:438,48,0	1/1:3,2:19:36.48:215,36,0	1/1:9,2:40:79.83:448,80,0	1/1:1,0:16:25.73:143,26,0	1/1:2,9:12:20.88:196,21,0	1/1:3,13:16:33.07:335,33,0	1/1:2,3:6:14.70:120,15,0	1/1:4,15:19:21.85:403,22,0	1/1:9,15:28:62.45:564,62,0	1/1:6,1:36:56.68:301,57,0	1/1:2,10:13:32.90:319,33,0
chr10	48346937	.	T	TA	9547.83	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-15.222;DP=639;FS=0.967;HRun=1;HaplotypeScore=57.1936;InbreedingCoeff=0.9990;MQ=92.94;MQ0=1;MQRankSum=-2.175;QD=42.43;ReadPosRankSum=-0.124;VQSLOD=4.9849;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,144,1852	0/0:8,0:8:24.08:0,24,312	0/0:33,0:33:96.26:0,96,1214	0/0:21,0:21:63.17:0,63,789	0/0:29,0:29:87.28:0,87,1128	0/0:25,0:25:75.23:0,75,960	0/0:21,0:21:63.19:0,63,803	1/1:0,45:45:99:1977,132,0	0/0:13,0:13:36.12:0,36,467	0/0:21,0:21:63.20:0,63,818	0/0:16,0:16:48.16:0,48,623	1/1:1,18:19:54.18:809,54,0	1/1:0,23:23:69.23:1034,69,0	0/0:15,0:15:45.15:0,45,584	0/0:29,0:29:84.27:0,84,1091	0/0:14,0:14:42.14:0,42,545	0/0:33,0:33:96.28:0,96,1229	0/0:23,0:22:66.17:0,66,838	1/1:2,23:25:72.20:1033,72,0	1/1:1,21:22:60.20:899,60,0	1/1:0,25:25:69.23:1034,69,0	1/1:1,21:22:57.15:829,57,0	1/1:0,16:16:48.16:719,48,0	1/1:0,15:15:42.14:630,42,0	0/0:29,0:29:87.28:0,87,1129	0/0:26,0:26:75.24:0,75,974	1/1:0,13:13:39.13:584,39,0	0/0:8,0:8:21.02:0,21,228
chr10	48347476	.	T	TA	8415.97	PASS	AB=0.574;AC=37;AF=0.661;AN=56;BaseQRankSum=-7.267;DP=546;FS=2.186;HRun=9;HaplotypeScore=68.4890;InbreedingCoeff=0.8692;MQ=90.23;MQ0=2;MQRankSum=-1.321;QD=24.68;ReadPosRankSum=1.901;VQSLOD=5.7836;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:65.96:0,66,569	0/0:8,0:8:21:0,21,182	0/0:44,0:35:2.54:0,3,299	0/0:38,0:31:9:0,9,297	1/1:1,22:24:54.91:606,55,0	0/0:19,0:20:50.02:0,50,423	0/0:11,0:11:23.96:0,24,202	1/1:4,19:23:49.31:610,49,0	0/0:17,0:18:20.93:0,21,340	1/1:3,23:26:66.18:728,66,0	1/1:1,11:12:6.99:292,7,0	1/1:0,10:12:29.75:294,30,0	1/1:0,18:19:44.95:479,45,0	1/1:1,11:12:27.07:299,27,0	0/0:21,0:21:59.93:0,60,511	0/0:18,0:18:44.99:0,45,391	1/1:1,13:14:27.07:299,27,0	1/1:6,15:21:39.05:418,39,0	0/1:7,20:27:9.01:570,0,9	1/1:4,17:21:48:500,48,0	1/1:2,15:17:16.06:405,16,0	1/1:1,8:9:24.06:264,24,0	1/1:3,16:19:22.08:472,22,0	1/1:0,7:7:21.06:232,21,0	1/1:2,30:32:72.19:796,72,0	1/1:4,15:19:23.02:473,23,0	1/1:3,15:19:47.96:512,48,0	1/1:2,6:8:15.04:166,15,0
chr10	48348489	.	GCCCGTCAGT	G	11919.12	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=17.059;DP=695;FS=51.575;HRun=0;HaplotypeScore=197.2627;InbreedingCoeff=0.9994;MQ=81.48;MQ0=0;MQRankSum=-15.978;QD=69.30;ReadPosRankSum=2.297;VQSLOD=3.0420;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,120,5624	0/0:13,0:13:39.13:0,39,1892	0/0:21,0:22:60.67:0,61,2585	0/0:25,0:25:66.23:0,66,2978	1/1:3,28:31:75.25:2096,75,0	0/0:26,0:26:75.26:0,75,3581	0/0:25,0:25:75.24:0,75,3298	0/0:22,0:22:66.22:0,66,2991	0/0:35,0:35:99:0,99,4467	1/1:2,20:22:60.20:1802,60,0	1/1:3,17:20:45.15:1234,45,0	0/0:28,0:28:78.26:0,78,3321	0/0:36,0:36:99:0,105,4896	1/1:3,17:20:42.14:1293,42,0	0/0:35,0:35:99:0,99,4607	0/0:29,0:29:84.29:0,84,3927	1/1:3,11:14:27.09:778,27,0	1/1:3,10:13:24.08:744,24,0	0/0:24,0:24:72.25:0,72,3361	0/0:18,0:18:51.13:0,51,2226	0/0:39,0:39:99:0,102,4503	0/0:17,0:17:51.13:0,51,2308	0/0:23,0:23:66.23:0,66,3117	0/0:28,0:28:84.29:0,84,3967	1/1:3,18:21:48.16:1449,48,0	1/1:1,18:19:54.19:1655,54,0	0/0:37,0:37:99:0,108,5176	1/1:2,10:12:30.10:868,30,0
chr10	48348653	.	TCAAAAA	T	4922.25	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=8.228;DP=648;FS=20.135;HRun=0;HaplotypeScore=138.4106;InbreedingCoeff=0.9429;MQ=64.56;MQ0=3;MQRankSum=-9.789;QD=30.96;ReadPosRankSum=2.947;VQSLOD=3.1786;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:93.30:0,93,2637	0/0:15,0:15:27.09:0,27,885	0/0:25,0:15:5.26:0,5,160	0/0:21,0:14:29.76:0,30,658	1/1:14,12:26:30.06:557,30,0	0/0:16,0:16:39.13:0,39,1288	0/0:22,0:22:54.17:0,54,1450	0/0:19,0:19:48.16:0,48,1463	0/0:20,0:20:42.14:0,42,1306	1/1:7,16:23:45.12:856,45,0	1/1:0,17:17:36.12:696,36,0	0/0:20,0:20:51.13:0,51,1317	0/0:28,0:28:69.23:0,69,2131	1/1:4,9:13:15.05:317,15,0	0/0:36,0:36:84.28:0,84,2558	0/0:29,0:29:60.18:0,60,1759	1/1:6,15:21:15.05:317,15,0	1/1:3,13:16:21.07:443,21,0	0/0:11,0:11:12.04:0,12,397	0/0:37,0:37:81.27:0,81,2532	0/0:27,0:27:60.16:0,60,1749	0/0:32,0:32:57.18:0,57,1616	0/0:17,0:17:45.15:0,45,1389	0/0:33,0:33:81.27:0,81,2544	1/1:3,18:21:45.15:949,45,0	1/1:7,13:20:39.13:724,39,0	0/0:36,0:36:75.25:0,75,2268	1/1:0,2:2:3.01:63,3,0
chr10	48352700	.	TTTC	T	33.35	PASS	AB=0.935;AC=9;AF=0.173;AN=52;BaseQRankSum=5.013;DP=285;FS=9.090;HRun=0;HaplotypeScore=46.0462;InbreedingCoeff=-0.2268;MQ=66.47;MQ0=20;MQRankSum=-2.367;QD=0.20;ReadPosRankSum=-2.241;VQSLOD=-0.2378;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:39.08:0,39,869	./.	0/1:61,0:15:18.89:19,0,467	0/1:56,0:16:20.38:20,0,368	0/0:6,0:6:11.77:0,12,287	0/0:2,0:2:6.02:0,6,148	0/0:14,0:14:42.14:0,42,1010	0/0:5,0:3:6.01:0,6,144	0/0:7,0:7:21.01:0,21,370	0/0:4,0:4:12.04:0,12,290	0/0:9,0:8:24.04:0,24,490	0/1:10,0:10:3.26:3,0,390	0/1:4,1:4:15.81:16,0,78	0/0:5,0:5:14.64:0,15,300	0/0:10,0:10:30.10:0,30,672	0/0:3,0:3:9.03:0,9,222	0/1:10,1:11:22.99:23,0,574	0/0:9,0:9:27.09:0,27,576	0/0:6,0:5:14.92:0,15,250	0/1:3,0:3:14.89:15,0,56	0/1:5,0:5:20.41:20,0,74	0/0:1,0:1:2.97:0,3,20	0/0:5,0:5:14.95:0,15,218	0/1:3,3:6:26.88:27,0,29	0/0:8,0:8:21.07:0,21,480	0/0:7,0:7:21.07:0,21,485	0/1:10,0:8:20.76:21,0,245	./.
chr10	48353939	.	AATTATT	A	252.53	PASS	AC=10;AF=0.278;AN=36;BaseQRankSum=2.195;DP=216;FS=0.000;HRun=0;HaplotypeScore=46.4226;InbreedingCoeff=0.5202;MQ=71.14;MQ0=3;MQRankSum=-1.558;QD=3.89;ReadPosRankSum=-1.285;VQSLOD=1.0094;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,3:9:3.01:60,3,0	1/1:3,0:5:3.01:42,3,0	./.	./.	0/0:6,0:6:3.01:0,3,77	1/1:7,3:10:3.01:60,3,0	./.	1/1:33,0:31:5.68:33,6,0	0/0:2,0:5:8.83:0,9,55	0/0:6,0:6:6.01:0,6,119	0/0:3,0:4:3.01:0,3,78	0/0:3,0:3:3.01:0,3,94	0/0:5,0:8:6.02:0,6,157	./.	./.	1/1:4,4:8:9.03:177,9,0	0/0:26,0:26:45.11:0,45,1365	0/0:14,0:20:21.07:0,21,515	./.	./.	0/0:1,0:2:2.94:0,3,18	./.	./.	./.	0/0:7,0:7:6.02:0,6,149	0/0:5,0:5:6.02:0,6,160	0/0:2,0:7:11.77:0,12,73	0/0:5,0:5:15.05:0,15,438
chr10	48354036	.	TA	T	500.17	PASS	AB=0.873;AC=11;AF=0.196;AN=56;BaseQRankSum=7.864;DP=258;FS=3.499;HRun=11;HaplotypeScore=31.4928;InbreedingCoeff=0.5265;MQ=84.54;MQ0=2;MQRankSum=0.539;QD=9.26;ReadPosRankSum=0.170;VQSLOD=1.2462;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:27.07:0,27,288	0/1:3,1:4:12.61:13,0,84	0/0:16,0:12:12.84:0,13,117	0/1:17,0:10:11.68:47,0,12	0/0:8,0:8:24.04:0,24,241	0/0:9,0:9:27.07:0,27,288	0/0:9,0:9:27.07:0,27,288	0/0:18,0:18:44.94:0,45,456	0/0:6,1:7:15.02:0,15,151	0/0:7,0:7:21.05:0,21,224	0/0:12,0:12:33.08:0,33,352	0/0:6,0:6:12.02:0,12,120	0/0:8,0:8:24.06:0,24,256	0/0:8,0:8:24.06:0,24,256	0/0:10,0:10:30.07:0,30,313	0/0:8,0:9:23.89:0,24,238	0/0:12,0:12:30.08:0,30,320	0/0:16,0:16:48.12:0,48,512	1/1:0,1:1:3:25,3,0	1/1:0,9:9:26.97:222,27,0	1/1:1,2:3:5.98:49,6,0	0/0:6,0:6:15.04:0,15,160	0/0:6,0:6:15.04:0,15,160	0/0:2,0:2:2.97:0,3,20	0/0:14,0:14:24.36:0,24,363	0/1:7,2:9:31.25:31,0,110	1/1:0,11:11:32.96:271,33,0	0/0:10,0:11:3.81:0,4,203
chr10	48354111	.	G	GA	687.07	PASS	AB=0.858;AC=16;AF=0.286;AN=56;BaseQRankSum=4.363;DP=401;FS=4.327;HRun=12;HaplotypeScore=45.0505;InbreedingCoeff=0.0422;MQ=67.95;MQ0=9;MQRankSum=-1.497;QD=3.73;ReadPosRankSum=-2.815;VQSLOD=-0.6190;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:19,2:22:2.62:3,0,300	0/1:4,1:5:20.22:20,0,35	0/1:25,0:11:4.47:4,0,49	0/1:27,0:10:11.21:11,0,12	0/0:16,1:17:12.49:0,12,249	0/0:18,0:18:32.74:0,33,241	0/0:13,0:14:31.74:0,32,216	1/1:10,0:25:45.87:242,46,0	0/0:15,0:15:41.71:0,42,302	0/1:3,1:4:20.23:20,0,35	0/0:12,0:13:19.89:0,20,137	0/1:9,1:12:7.26:7,0,97	0/0:10,0:10:11.84:0,12,87	0/0:13,1:15:2.59:0,3,170	0/0:12,0:12:26.82:0,27,197	0/0:16,0:16:41.73:0,42,305	0/0:28,1:29:46.17:0,46,457	0/0:27,0:28:61.63:0,62,443	1/1:2,3:5:5.97:50,6,0	0/1:9,6:15:1.04:139,0,1	0/1:3,8:11:19.76:151,0,20	0/1:4,0:4:12.46:12,0,35	0/1:7,0:7:17.12:17,0,54	0/0:5,0:5:11.91:0,12,86	0/0:14,0:13:20.82:0,21,153	0/1:8,2:10:40.49:40,0,70	0/1:6,4:10:3.88:128,0,4	0/0:10,0:7:16.94:0,17,115
chr10	48354328	.	ATGT	A	3483.19	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=11.720;DP=609;FS=2.164;HRun=0;HaplotypeScore=84.2176;InbreedingCoeff=0.9988;MQ=74.69;MQ0=0;MQRankSum=-2.846;QD=40.50;ReadPosRankSum=2.240;VQSLOD=4.9438;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,111,2493	0/0:7,0:7:21.07:0,21,453	0/0:12,0:12:30:0,30,602	0/0:20,0:18:51.16:0,51,1023	0/0:13,0:13:39.13:0,39,884	0/0:24,0:24:66.23:0,66,1496	0/0:20,0:20:51.18:0,51,1156	0/0:40,0:40:99:0,114,2571	0/0:19,0:19:57.20:0,57,1291	0/0:21,0:21:63.22:0,63,1417	0/0:35,0:35:99:0,105,2374	1/1:1,13:14:33.11:537,33,0	1/1:0,16:16:39.13:650,39,0	0/0:26,0:26:75.26:0,75,1694	0/0:26,0:26:78.27:0,78,1766	0/0:27,0:27:78.27:0,78,1768	0/0:24,0:24:69.24:0,69,1564	0/0:29,0:29:72.21:0,72,1585	0/0:31,0:31:87.30:0,87,1972	0/0:20,0:20:57.20:0,57,1292	0/0:16,0:16:48.16:0,48,1083	1/1:1,14:15:36.12:598,36,0	1/1:0,18:18:51.17:849,51,0	1/1:3,20:23:51.17:849,51,0	0/0:18,0:18:54.19:0,54,1223	0/0:21,0:21:63.20:0,63,1345	0/0:21,0:21:60.21:0,60,1340	0/0:15,0:15:42.11:0,42,901
chr10	48355855	.	G	GGT	4328.04	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-8.815;DP=523;FS=1.524;HRun=0;HaplotypeScore=74.2629;InbreedingCoeff=0.9865;MQ=58.40;MQ0=3;MQRankSum=1.791;QD=48.09;ReadPosRankSum=-2.055;VQSLOD=5.0860;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:78.15:0,78,1173	0/0:6,0:6:15.04:0,15,237	0/0:24,0:17:40.49:0,40,479	0/0:16,0:6:11.34:0,11,128	0/0:36,0:36:99:0,105,1582	0/0:16,0:16:45.08:0,45,685	0/0:16,0:16:48.16:0,48,757	1/1:1,15:17:48.05:721,48,0	0/0:17,0:17:48.08:0,48,707	0/0:23,0:23:63.20:0,63,995	0/0:16,0:16:48.16:0,48,767	0/0:19,0:19:54.12:0,54,828	0/0:20,0:20:57.13:0,57,875	0/0:20,0:20:57.05:0,57,829	0/0:13,0:13:39.06:0,39,596	0/0:22,0:22:63.16:0,63,976	0/0:24,0:24:72.18:0,72,1081	0/0:8,0:8:21.07:0,21,326	1/1:8,10:17:51.09:810,51,0	1/1:1,24:27:72.24:1375,72,0	1/1:1,9:11:24.08:464,24,0	0/0:18,0:19:54.02:0,54,774	0/0:20,0:20:57.19:0,57,913	0/0:18,0:18:51.17:0,51,818	0/0:20,0:21:58.91:0,59,847	0/0:18,0:18:54.14:0,54,818	1/1:1,16:17:51.11:958,51,0	0/0:10,0:11:32.14:0,32,487
chr10	48356227	.	C	CA	3143.37	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-11.980;DP=791;FS=3.585;HRun=7;HaplotypeScore=73.8227;InbreedingCoeff=0.9996;MQ=76.21;MQ0=0;MQRankSum=-0.826;QD=26.64;ReadPosRankSum=-0.185;VQSLOD=4.2547;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,108,1036	0/0:9,0:9:27.04:0,27,261	0/0:19,0:19:41.25:0,41,374	0/0:14,0:14:32.79:0,33,302	0/0:27,0:27:78.11:0,78,748	0/0:31,0:30:72.10:0,72,695	0/0:26,0:26:66.08:0,66,631	0/0:31,0:31:84.13:0,84,811	0/0:30,0:30:81.11:0,81,776	0/0:41,0:41:99:0,102,985	0/0:18,0:18:48.08:0,48,464	0/0:44,0:44:99:0,126,1211	0/0:45,0:45:99:0,129,1246	0/0:40,0:40:99:0,108,1037	0/0:35,0:35:99:0,99,956	0/0:33,0:33:84.13:0,84,811	0/0:24,0:25:54.75:0,55,623	0/0:12,0:12:36.01:0,36,334	1/1:6,16:23:51.01:583,51,0	1/1:5,29:34:84.18:983,84,0	1/1:4,23:27:57.17:689,57,0	0/0:23,0:23:66.10:0,66,637	0/0:28,0:28:75.11:0,75,724	0/0:26,0:26:63.09:0,63,608	0/0:28,0:28:78.12:0,78,753	0/0:34,0:33:87.12:0,87,840	1/1:4,30:34:87.27:1049,87,0	0/0:13,0:13:39.06:0,39,376
chr10	48357065	.	TGGG	T	2542.69	PASS	AB=0.509;AC=9;AF=0.161;AN=56;BaseQRankSum=2.076;DP=522;FS=11.092;HRun=11;HaplotypeScore=88.7368;InbreedingCoeff=0.8829;MQ=78.52;MQ0=0;MQRankSum=0.591;QD=24.22;ReadPosRankSum=6.038;VQSLOD=1.1074;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:31:48.11:0,48,767	0/0:6,0:6:15.05:0,15,273	0/0:19,0:20:34.09:0,34,483	0/0:19,0:20:39.66:0,40,580	0/0:16,0:16:21.07:0,21,381	0/0:21,0:23:45.11:0,45,804	0/0:15,0:18:39.05:0,39,637	0/0:7,0:17:32.62:0,33,305	0/0:16,0:16:27.08:0,27,526	0/0:10,0:11:15.03:0,15,222	0/0:12,0:12:15.04:0,15,239	1/1:0,15:15:39.13:512,39,0	1/1:7,20:28:32.57:685,33,0	0/0:16,0:16:24.08:0,24,442	0/0:23,0:25:33.52:0,34,588	0/0:27,0:27:48.15:0,48,906	0/0:18,0:21:33.07:0,33,571	0/0:10,0:10:24.07:0,24,431	0/0:8,0:16:32.91:0,33,280	0/0:12,0:24:44.90:0,45,418	0/0:3,0:27:59.79:0,60,483	1/1:2,17:19:36.09:472,36,0	1/1:4,12:16:30.09:385,30,0	0/1:1,26:27:3.44:652,0,3	0/0:18,0:19:20.98:0,21,373	0/0:14,0:14:12.02:0,12,191	0/0:8,0:21:44.86:0,45,372	0/0:6,0:6:12.04:0,12,242
chr10	48357926	.	AGT	A	4281.79	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=13.184;DP=492;FS=9.177;HRun=0;HaplotypeScore=66.9881;InbreedingCoeff=0.9924;MQ=88.61;MQ0=0;MQRankSum=-7.334;QD=43.25;ReadPosRankSum=-2.221;VQSLOD=5.3941;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,129,2477	0/0:7,0:7:21.07:0,21,405	0/0:21,0:21:53.67:0,54,945	0/0:17,0:17:48.16:0,48,912	0/0:17,0:17:44.89:0,45,835	0/0:18,0:18:54.19:0,54,1043	0/0:16,0:16:48.16:0,48,927	1/1:1,27:28:81.26:1216,81,0	0/0:10,0:10:27.09:0,27,522	0/0:25,0:25:75.26:0,75,1449	0/0:21,0:21:63.22:0,63,1207	0/0:9,0:9:27.09:0,27,522	0/0:15,0:15:45.15:0,45,869	0/0:5,0:5:15.05:0,15,290	0/0:19,0:19:57.20:0,57,1101	0/0:15,0:15:45.15:0,45,868	0/0:38,0:38:99:0,114,2130	0/0:23,0:23:66.23:0,66,1275	1/1:1,15:16:45.15:675,45,0	1/1:0,20:20:60.20:918,60,0	1/1:0,10:10:24.08:350,24,0	0/0:6,0:6:18.06:0,18,347	0/0:14,0:14:42.13:0,42,777	0/0:10,0:10:30.10:0,30,579	0/0:13,0:13:39.13:0,39,754	0/0:19,0:19:54.14:0,54,1006	1/1:2,23:25:75.24:1123,75,0	0/0:11,0:11:33.11:0,33,632
chr10	48357949	.	GT	G	814.15	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=11.609;DP=466;FS=1.142;HRun=1;HaplotypeScore=64.3520;InbreedingCoeff=0.9570;MQ=90.52;MQ0=0;MQRankSum=-10.913;QD=12.53;ReadPosRankSum=0.988;VQSLOD=2.2690;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,123,1728	0/0:8,0:8:21.06:0,21,287	0/0:26,0:26:75.07:0,75,972	0/0:14,0:14:42.13:0,42,597	0/0:14,0:14:35.79:0,36,495	0/0:20,0:20:60.11:0,60,808	0/0:12,0:12:36.10:0,36,507	0/0:37,0:37:99:0,108,1452	0/0:9,0:9:27.09:0,27,392	0/0:25,0:25:75.25:0,75,1082	0/0:17,0:17:48.14:0,48,681	0/0:8,0:8:24.08:0,24,347	0/0:12,0:12:36.11:0,36,507	0/0:5,0:5:15.04:0,15,199	0/0:19,0:19:57.19:0,57,832	0/0:14,0:14:42.11:0,42,571	0/0:38,0:38:99:0,111,1537	0/0:19,0:19:57.19:0,57,832	1/1:19,0:19:52.36:260,52,0	1/1:15,3:18:25.51:334,26,0	1/1:8,0:8:14.76:95,15,0	0/0:4,0:4:12.04:0,12,163	0/0:12,0:12:27.08:0,27,392	0/0:9,0:9:27.06:0,27,371	0/0:12,0:12:33.11:0,33,483	0/0:14,0:14:42.12:0,42,566	1/1:19,1:20:7.57:279,8,0	0/0:12,0:12:36.12:0,36,526
chr10	48357950	.	TG	T	1963.08	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=11.056;DP=458;FS=2.506;HRun=5;HaplotypeScore=59.5799;InbreedingCoeff=0.9795;MQ=90.22;MQ0=0;MQRankSum=-10.796;QD=30.20;ReadPosRankSum=0.334;VQSLOD=4.2019;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,120,1706	0/0:8,0:8:21.07:0,21,301	0/0:25,0:25:71.92:0,72,958	0/0:14,0:14:42.14:0,42,602	0/0:13,0:13:32.80:0,33,473	0/0:21,0:21:60.17:0,60,821	0/0:11,0:11:33.11:0,33,474	0/0:36,0:36:96.29:0,96,1316	0/0:9,0:9:27.09:0,27,389	0/0:25,0:25:75.12:0,75,1051	0/0:16,0:16:48.16:0,48,690	0/0:8,0:8:24.08:0,24,341	0/0:11,0:11:33.11:0,33,474	0/0:5,0:5:15.03:0,15,196	0/0:19,0:19:57.19:0,57,819	0/0:14,0:14:39.13:0,39,561	0/0:38,0:38:99:0,108,1522	0/0:19,0:19:57.19:0,57,813	1/1:0,19:19:57.18:701,57,0	1/1:4,14:18:47.98:587,48,0	1/1:0,8:8:15.05:183,15,0	0/0:4,0:4:12.04:0,12,166	0/0:10,0:10:27.09:0,27,389	0/0:9,0:9:24.08:0,24,340	0/0:11,0:11:33.11:0,33,475	0/0:14,0:14:39.13:0,39,559	1/1:4,16:20:54.15:650,54,0	0/0:12,0:12:36.12:0,36,518
chr10	48358699	.	G	GCTGTTAGCTCCTTT	27016.56	PASS	AC=38;AF=0.731;AN=52;BaseQRankSum=10.531;DP=911;FS=2.191;HRun=0;HaplotypeScore=414.6582;InbreedingCoeff=0.9162;MQ=65.75;MQ0=0;MQRankSum=-9.950;QD=40.75;ReadPosRankSum=-4.269;VQSLOD=2.0651;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:51.17:0,51,1725	0/0:11,0:11:9.02:0,9,255	./.	./.	1/1:42,0:42:45.03:1606,45,0	0/0:21,0:21:30.08:0,30,973	0/0:28,0:28:15.05:0,15,455	1/1:45,0:45:24.78:288,25,0	0/0:34,0:34:42.12:0,42,1199	1/1:45,0:45:48.16:2315,48,0	1/1:34,0:34:27.45:926,27,0	1/1:50,0:50:72.23:3252,72,0	1/1:46,0:45:84.21:3093,84,0	1/1:37,0:37:39.13:1829,39,0	0/0:34,0:34:54.17:0,54,1736	0/0:31,0:31:39.12:0,39,1295	1/1:22,0:22:21.07:792,21,0	1/1:22,0:22:12.04:656,12,0	1/1:27,0:27:12.04:662,12,0	1/1:20,3:32:5.96:218,6,0	1/1:38,0:38:21.03:841,21,0	1/1:42,0:42:46.04:2496,46,0	1/1:36,0:36:66.16:2664,66,0	1/1:30,0:30:24.08:843,24,0	1/1:34,0:34:33.11:1382,33,0	1/1:36,0:36:54.14:2430,54,0	1/1:22,5:32:3.01:199,3,0	1/1:13,0:13:12.04:524,12,0
chr10	48360727	.	CTCTT	C	9271.52	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=14.874;DP=663;FS=0.331;HRun=0;HaplotypeScore=112.2556;InbreedingCoeff=0.9909;MQ=78.01;MQ0=0;MQRankSum=-8.273;QD=44.79;ReadPosRankSum=4.462;VQSLOD=5.2547;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,117,3019	0/0:15,0:15:42.14:0,42,1094	0/0:20,0:20:51.18:0,51,1239	0/0:18,0:18:45.15:0,45,1060	1/1:0,22:22:54.19:1005,54,0	0/0:32,0:32:90.29:0,90,2270	0/0:19,0:19:54.19:0,54,1399	0/0:25,0:25:72.23:0,72,1791	0/0:23,0:23:63.22:0,63,1651	1/1:0,22:22:66.23:1231,66,0	1/1:5,22:27:60.20:1100,60,0	0/0:26,0:26:75.26:0,75,1993	0/0:20,0:20:57.20:0,57,1515	1/1:2,24:26:57.19:1045,57,0	0/0:29,0:29:78.27:0,78,2032	0/0:24,0:24:63.22:0,63,1659	1/1:0,26:25:48.16:895,48,0	1/1:1,20:21:54.18:988,54,0	0/0:17,0:17:42.14:0,42,1088	0/0:32,0:32:96.30:0,96,2398	0/0:23,0:23:63.20:0,63,1555	0/0:24,0:24:72.23:0,72,1837	0/0:21,0:21:63.22:0,63,1680	0/0:25,0:25:72.25:0,72,1921	1/1:1,30:31:75.26:1362,75,0	1/1:0,27:27:81.28:1476,81,0	0/0:24,0:24:72.25:0,72,1878	1/1:0,5:5:9.03:168,9,0
chr10	48361408	.	G	GT	6523.65	PASS	AB=0.953;AC=28;AF=0.500;AN=56;BaseQRankSum=-6.005;DP=596;FS=2.636;HRun=8;HaplotypeScore=107.3134;InbreedingCoeff=0.7467;MQ=64.15;MQ0=3;MQRankSum=-0.337;QD=18.32;ReadPosRankSum=1.542;VQSLOD=4.3494;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:62.06:0,62,554	0/0:12,0:12:23.99:0,24,215	0/0:18,0:13:17.95:0,18,159	0/1:18,0:10:23.07:23,0,50	1/1:1,19:20:54.12:607,54,0	0/0:18,0:18:41.98:0,42,379	0/0:11,0:11:27.01:0,27,247	0/0:28,0:28:66.01:0,66,599	0/0:18,0:18:47.75:0,48,417	1/1:3,34:37:99:1110,99,0	1/1:3,22:25:69.03:771,69,0	0/1:19,2:21:24.81:25,0,150	0/0:26,0:26:52.20:0,52,297	1/1:4,13:17:36.10:406,36,0	0/0:26,0:26:69.02:0,69,628	0/0:16,0:16:42.02:0,42,384	1/1:4,22:26:35.78:661,36,0	1/1:5,14:19:17.89:438,18,0	1/1:17,0:15:21.51:229,22,0	1/1:26,0:26:22.78:211,23,0	0/1:9,0:9:0.45:2,0,0	0/0:20,0:20:38.88:0,39,200	0/0:21,0:20:27.72:0,28,169	0/1:8,1:9:8.83:28,0,9	1/1:2,31:32:84.25:964,84,0	1/1:5,18:23:35.20:637,35,0	1/1:40,0:40:5.06:17,5,0	1/1:7,9:16:36.08:394,36,0
chr10	48361415	.	TTG	T	3656.81	PASS	AB=1.000;AC=18;AF=0.321;AN=56;BaseQRankSum=0.398;DP=576;FS=9.667;HRun=0;HaplotypeScore=118.3943;InbreedingCoeff=0.1544;MQ=59.61;MQ0=3;MQRankSum=1.360;QD=11.15;ReadPosRankSum=-4.489;VQSLOD=1.6581;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:53.06:0,53,1022	0/0:12,0:12:30.09:0,30,496	0/0:17,0:10:9.33:0,9,198	0/1:18,0:8:11.40:11,0,99	0/1:21,0:21:70.13:70,0,295	0/0:17,0:17:48.12:0,48,740	0/0:11,0:11:33.02:0,33,504	0/0:26,0:26:50.86:0,51,957	0/0:19,0:19:55.61:0,56,766	0/1:36,0:36:90.95:91,0,603	0/1:25,0:24:99:133,0,286	0/0:19,0:19:30.72:0,31,218	0/0:22,0:22:51.51:0,52,327	0/1:17,0:17:56.95:57,0,195	0/0:28,0:28:81.15:0,81,1208	0/0:15,0:15:44.92:0,45,695	0/1:23,0:23:95.83:96,0,297	0/1:19,0:19:48.97:49,0,220	1/1:2,15:15:45.04:510,45,0	1/1:1,25:26:72.19:971,72,0	1/1:1,8:9:17.65:226,18,0	0/0:18,0:18:16.92:0,17,233	0/1:19,0:18:34.28:34,0,167	0/0:9,0:9:1.87:0,2,17	0/1:34,0:32:99:138,0,407	0/1:25,0:25:12.65:13,0,469	1/1:2,37:39:87.29:1257,87,0	0/0:13,0:13:12.96:0,13,255
chr10	48361438	.	TTTC	T	2086.85	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=3.390;DP=612;FS=35.905;HRun=0;HaplotypeScore=140.6816;InbreedingCoeff=0.4770;MQ=55.45;MQ0=8;MQRankSum=-2.694;QD=8.62;ReadPosRankSum=-7.250;VQSLOD=-0.7645;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:44.48:0,44,777	0/0:13,0:13:33.05:0,33,476	0/0:30,0:10:18.02:0,18,221	0/0:24,0:11:11.04:0,11,125	0/0:23,0:23:14.15:0,14,528	0/0:16,0:16:48.03:0,48,619	0/0:13,0:13:37.30:0,37,469	1/1:24,2:25:63.62:516,64,0	0/0:22,0:22:62.52:0,63,782	0/0:38,0:37:1.31:0,1,1040	0/1:25,0:24:10.09:10,0,410	0/1:17,0:16:34.65:93,0,35	0/1:21,0:21:29.92:159,0,30	0/0:14,0:14:2.02:0,2,365	0/0:24,0:24:72.06:0,72,1175	0/0:21,0:21:53.46:0,53,814	0/0:28,0:26:6.83:0,7,499	0/0:15,0:15:27.07:0,27,401	1/1:17,0:15:18.95:180,19,0	1/1:29,0:28:34.72:340,35,0	1/1:16,0:16:27.69:150,28,0	0/1:18,0:18:59:133,0,59	1/1:24,2:25:29.36:342,29,0	1/1:11,0:11:3:26,3,0	0/0:23,0:21:45.80:0,46,654	0/0:31,0:29:2.32:0,2,770	0/1:36,0:36:3.87:323,0,4	0/0:12,0:12:35.81:0,36,410
chr10	48361439	.	TTC	T	3663.91	PASS	AB=0.965;AC=25;AF=0.446;AN=56;BaseQRankSum=3.679;DP=614;FS=27.948;HRun=0;HaplotypeScore=125.5878;InbreedingCoeff=0.5488;MQ=55.43;MQ0=8;MQRankSum=-2.804;QD=10.09;ReadPosRankSum=-7.473;VQSLOD=0.7319;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:34.69:0,35,565	0/0:13,0:13:32.89:0,33,382	0/0:30,0:10:5.84:0,6,176	0/0:24,0:11:0.07:0,0,90	0/1:23,0:23:18.72:19,0,368	0/0:16,0:16:47.58:0,48,478	0/0:13,0:13:21.02:0,21,362	1/1:28,0:27:69.62:560,70,0	0/0:22,0:22:58.58:0,59,629	0/1:37,1:37:34.33:34,0,787	0/1:25,0:24:29.49:29,0,305	1/1:15,2:16:14.75:158,15,0	1/1:21,0:21:30.31:278,30,0	0/0:14,0:14:11.36:0,11,260	0/0:24,0:24:70.70:0,71,896	0/0:21,0:21:46.76:0,47,623	0/1:27,1:26:29.87:30,0,352	0/0:15,0:15:14.51:0,15,280	1/1:17,0:15:32.47:247,32,0	1/1:27,2:28:68.31:537,68,0	1/1:16,0:16:38.63:269,39,0	1/1:19,0:19:13.22:239,13,0	1/1:25,1:25:48.10:495,48,0	1/1:11,0:11:3:26,3,0	0/0:23,0:21:27.20:0,27,498	0/1:27,4:29:99:102,0,545	1/1:31,3:34:69.82:641,70,0	0/0:13,0:13:12.65:0,13,260
chr10	48361440	.	TC	T	4472.26	PASS	AB=0.979;AC=27;AF=0.482;AN=56;BaseQRankSum=3.881;DP=607;FS=46.464;HRun=1;HaplotypeScore=111.8742;InbreedingCoeff=0.4698;MQ=55.46;MQ0=8;MQRankSum=-3.665;QD=11.68;ReadPosRankSum=-6.155;VQSLOD=0.0728;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:27.41:0,27,404	0/0:13,0:13:31.84:0,32,302	0/0:28,2:11:3.20:0,3,130	0/0:24,0:11:14.26:0,14,78	0/1:22,1:23:9.27:9,0,233	0/0:16,0:16:41.48:0,41,347	0/0:13,0:13:32.69:0,33,276	1/1:26,0:25:69.51:548,70,0	0/0:21,2:23:38.42:0,38,462	0/1:37,0:36:33.21:33,0,588	0/1:24,1:24:73.24:73,0,205	1/1:15,1:15:30.23:239,30,0	1/1:20,0:20:53.65:467,54,0	0/1:14,0:14:10.13:10,0,152	0/0:24,0:24:70.35:0,70,658	0/0:21,0:21:48.70:0,49,464	0/1:27,1:26:42.18:42,0,234	0/0:15,0:15:6.16:0,6,184	1/1:17,0:15:37.13:302,37,0	1/1:26,3:28:73.18:648,73,0	1/1:12,4:16:39.64:350,40,0	1/1:16,3:19:41.98:349,42,0	1/1:21,4:24:58.22:520,58,0	1/1:1,10:11:3:26,3,0	0/0:23,0:21:26.09:0,26,374	0/1:30,1:29:92.04:92,0,343	1/1:29,4:33:87.78:759,88,0	0/1:13,0:13:3.83:4,0,126
chr10	48364363	.	T	TATC	8053.80	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-13.099;DP=639;FS=1.184;HRun=0;HaplotypeScore=83.5217;InbreedingCoeff=0.9800;MQ=62.14;MQ0=0;MQRankSum=0.485;QD=41.30;ReadPosRankSum=2.163;VQSLOD=5.6909;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:46.85:0,47,1023	0/0:11,0:11:27.09:0,27,387	0/0:10,0:10:18.05:0,18,230	0/0:6,0:5:6.02:0,6,86	1/1:13,21:35:63.22:1269,63,0	0/0:27,0:27:69.23:0,69,987	0/0:15,0:15:36.07:0,36,473	0/0:34,0:34:45.14:0,45,628	0/0:20,0:20:39.13:0,39,558	1/1:4,19:24:60.19:1110,60,0	1/1:5,14:20:21.28:810,21,0	0/0:23,0:23:63.21:0,63,902	0/0:27,0:27:69.22:0,69,960	1/1:3,14:19:33.11:662,33,0	0/0:30,0:30:81.27:0,81,1157	0/0:21,0:21:48.15:0,48,669	1/1:4,13:17:33.11:671,33,0	1/1:1,7:8:21.07:420,21,0	0/0:19,0:19:36.09:0,36,493	0/0:39,0:39:93.30:0,93,1311	0/0:25,0:25:63.20:0,63,882	0/0:23,0:23:48.16:0,48,687	0/0:26,0:26:60.20:0,60,859	0/0:11,0:11:24.08:0,24,344	1/1:5,20:25:48.16:976,48,0	1/1:11,28:40:50.67:1710,51,0	0/0:42,0:42:90.30:0,90,1289	1/1:0,7:7:21.07:427,21,0
chr10	48368903	.	AAAAG	A	1515.13	PASS	AB=0.688;AC=19;AF=0.352;AN=54;BaseQRankSum=2.764;DP=333;FS=17.611;HRun=0;HaplotypeScore=68.3536;InbreedingCoeff=0.7305;MQ=49.89;MQ0=8;MQRankSum=4.555;QD=12.32;ReadPosRankSum=-0.022;VQSLOD=1.5001;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:32:84.22:0,84,1858	0/0:3,0:3:6.02:0,6,141	1/1:28,0:6:0.47:1,0,0	0/0:38,0:7:13.59:0,14,137	1/1:7,8:15:20.81:167,21,0	0/0:5,0:5:12.04:0,12,252	0/0:11,0:11:23.95:0,24,510	0/0:24,0:24:39.96:0,40,695	0/0:6,0:6:11.95:0,12,134	1/1:7,1:8:14.88:144,15,0	1/1:6,11:17:29.84:289,30,0	0/0:7,0:7:11.97:0,12,146	0/0:15,0:15:33.45:0,33,399	1/1:2,0:2:3:27,3,0	0/0:2,0:2:6.02:0,6,142	0/0:5,0:5:9.03:0,9,212	1/1:11,12:23:30.10:472,30,0	0/1:6,5:11:45.45:198,0,45	0/0:14,0:13:17.42:0,17,244	0/0:10,0:10:24.08:0,24,371	0/0:7,0:6:11.05:0,11,146	./.	0/0:7,0:7:8.94:0,9,99	0/0:8,0:8:3.90:0,4,59	1/1:4,2:6:6.02:79,6,0	1/1:5,4:9:14.98:183,15,0	0/0:15,0:15:26.92:0,27,329	1/1:1,3:4:9.03:142,9,0
chr10	48368904	.	AAAG	A	856.20	PASS	AB=0.946;AC=9;AF=0.167;AN=54;BaseQRankSum=6.116;DP=335;FS=16.333;HRun=0;HaplotypeScore=64.3680;InbreedingCoeff=-0.2216;MQ=49.72;MQ0=8;MQRankSum=4.189;QD=8.00;ReadPosRankSum=0.925;VQSLOD=1.3296;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:32:90.18:0,90,1653	0/0:3,0:3:9.01:0,9,145	0/0:30,0:6:2.92:0,3,23	0/0:39,0:7:11.38:0,11,101	0/1:15,0:15:99:102,0,120	0/0:5,0:5:15.02:0,15,231	0/0:11,0:11:14.34:0,14,458	0/0:24,0:24:60.84:0,61,857	0/0:6,0:6:14.99:0,15,206	0/1:4,4:8:23.69:124,0,24	0/1:17,0:17:30.88:181,0,31	0/0:7,0:7:20.94:0,21,256	0/0:15,0:15:39.03:0,39,586	0/0:2,0:2:0.81:0,1,20	0/0:2,0:2:6.02:0,6,122	0/0:5,0:5:12.03:0,12,208	0/1:23,0:23:69.79:210,0,70	0/1:9,2:11:80.30:159,0,80	0/1:14,0:13:25.37:25,0,300	0/0:10,0:10:30.03:0,30,436	0/0:7,0:6:14.04:0,14,168	./.	0/0:7,0:7:18.38:0,18,189	0/0:8,0:8:12.85:0,13,123	0/1:6,0:6:34.46:38,0,34	0/1:9,0:9:25.44:93,0,25	0/0:14,0:14:41.93:0,42,489	0/1:4,0:4:11.25:60,0,11
chr10	48369036	.	AAAAAAAAAATATATATATATAT	A	561.63	PASS	AB=1.000;AC=12;AF=0.250;AN=48;BaseQRankSum=0.123;DP=100;FS=14.430;HRun=0;HaplotypeScore=57.4639;InbreedingCoeff=0.3699;MQ=77.16;MQ0=4;MQRankSum=0.123;QD=15.18;ReadPosRankSum=-1.807;VQSLOD=-0.5586;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:4:12.04:0,12,412	0/0:1,0:1:3.01:0,3,124	0/0:8,0:5:12.02:0,12,215	0/0:6,0:1:2.94:0,3,18	./.	0/0:2,0:2:6.02:0,6,195	0/0:3,0:3:9.03:0,9,392	0/0:12,0:10:22.87:0,23,169	0/0:3,0:3:6:0,6,52	0/0:2,0:2:3.01:0,3,80	1/1:2,0:2:2.99:25,3,0	0/0:1,0:1:0:0,0,0	0/0:3,0:2:6.02:0,6,92	0/0:1,0:1:0:0,0,0	./.	./.	0/1:12,0:12:30.69:31,0,552	0/0:10,0:9:15.05:0,15,952	1/1:1,7:8:17.87:357,18,0	1/1:3,0:3:6.01:122,6,0	0/0:3,0:3:0:0,0,0	./.	0/0:1,0:1:3.01:0,3,57	0/0:2,0:2:6.01:0,6,86	0/0:1,0:1:0:0,0,0	1/1:3,0:3:2.98:26,3,0	1/1:5,0:5:3:70,3,0	0/1:4,0:3:61.36:61,0,165
chr10	48369045	.	ATATATATATATATATATAT	A	225.66	PASS	AB=0.917;AC=3;AF=0.094;AN=32;BaseQRankSum=0.636;DP=88;FS=0.000;HRun=0;HaplotypeScore=54.6556;InbreedingCoeff=-0.0008;MQ=66.06;MQ0=5;MQRankSum=1.973;QD=9.03;ReadPosRankSum=-1.386;VQSLOD=0.4243;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:4:5.90:0,6,41	0/0:1,0:1:2.97:0,3,20	0/0:5,0:2:2.97:0,3,21	0/0:5,0:1:3.01:0,3,43	./.	0/0:1,0:2:5.98:0,6,93	0/0:3,0:3:8.94:0,9,161	0/1:10,5:13:35.61:241,0,36	./.	0/0:1,0:1:3.01:0,3,136	./.	./.	0/0:2,0:1:1.82:0,2,5	./.	./.	./.	0/0:11,0:10:12.04:0,12,821	0/0:11,0:10:18.06:0,18,1365	0/1:7,0:7:64.17:64,0,85	0/0:2,0:2:2.03:0,2,6	./.	./.	./.	./.	./.	0/1:3,0:3:0:0,0,0	0/0:4,0:4:2.22:0,2,7	0/0:5,0:4:8.61:0,9,467
chr10	48372169	.	CT	C	3021.17	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=12.978;DP=571;FS=2.570;HRun=3;HaplotypeScore=66.4601;InbreedingCoeff=0.9961;MQ=68.87;MQ0=0;MQRankSum=-1.384;QD=33.20;ReadPosRankSum=1.194;VQSLOD=4.2097;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,117,1645	0/0:8,0:8:24.06:0,24,311	0/0:20,0:18:49.02:0,49,653	0/0:20,0:20:47.79:0,48,576	0/0:16,0:16:45.15:0,45,647	0/0:18,0:18:54.18:0,54,776	0/0:21,0:21:63.18:0,63,885	0/0:28,0:28:84.27:0,84,1178	0/0:23,0:23:66.20:0,66,914	0/0:12,0:12:30.10:0,30,432	0/0:15,0:15:42.13:0,42,587	0/0:27,0:27:78.24:0,78,1088	0/0:20,0:20:60.17:0,60,824	0/0:24,0:24:66.22:0,66,949	0/0:27,0:26:81.25:0,81,1129	0/0:30,0:30:87.25:0,87,1215	0/0:27,0:27:81.27:0,81,1166	0/0:11,0:11:30.08:0,30,412	1/1:0,14:14:42.12:508,42,0	1/1:0,10:10:30.09:372,30,0	1/1:0,40:40:99:1376,111,0	0/0:8,0:8:24.08:0,24,346	0/0:16,0:16:45.14:0,45,631	0/0:33,0:33:99:0,99,1425	0/0:6,0:6:18.04:0,18,239	0/0:17,0:17:51.17:0,51,734	1/1:1,26:27:75.23:925,75,0	0/0:14,0:14:42.13:0,42,586
chr10	48372366	.	T	TAAAAAAA	11569.69	PASS	AB=1.000;AC=39;AF=0.696;AN=56;BaseQRankSum=2.750;DP=459;FS=20.824;HRun=7;HaplotypeScore=102.9429;InbreedingCoeff=0.8364;MQ=69.36;MQ0=0;MQRankSum=-7.210;QD=37.44;ReadPosRankSum=-5.473;VQSLOD=-0.1157;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:60.12:0,60,1129	0/0:2,0:2:5.99:0,6,50	0/1:18,0:15:13.81:14,0,269	0/0:25,0:23:35.51:0,36,604	1/1:9,10:23:44.96:867,45,0	0/0:17,0:17:51.14:0,51,1018	0/0:25,0:25:72.16:0,72,1350	1/1:9,1:28:64.06:954,64,0	0/0:18,0:18:51.14:0,51,984	1/1:4,17:21:54.42:830,54,0	1/1:6,4:11:18.06:552,18,0	1/1:8,0:22:32.85:967,33,0	1/1:2,0:12:12.04:338,12,0	1/1:4,10:16:29.91:872,30,0	0/0:27,0:27:69.08:0,69,1262	0/0:15,0:15:36:0,36,617	1/1:4,9:16:12.04:376,12,0	1/1:2,12:15:18.06:683,18,0	1/1:22,0:22:52.73:874,53,0	1/1:11,0:11:20.94:596,21,0	1/1:5,0:5:3.01:95,3,0	1/1:6,0:10:18:240,18,0	1/1:12,0:14:14.80:583,15,0	1/1:3,1:13:12.04:309,12,0	1/1:7,5:13:18.53:591,19,0	1/1:5,11:18:47.99:859,48,0	1/1:17,0:16:23.68:772,24,0	1/1:1,3:4:6.02:197,6,0
chr10	48372368	.	A	AAAAAAAC	9426.21	PASS	AB=1.000;AC=37;AF=0.661;AN=56;BaseQRankSum=4.975;DP=461;FS=15.081;HRun=0;HaplotypeScore=112.1618;InbreedingCoeff=0.6501;MQ=69.74;MQ0=0;MQRankSum=-8.801;QD=30.51;ReadPosRankSum=-3.677;VQSLOD=2.7930;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:60.20:0,60,1329	0/0:2,0:2:6.02:0,6,104	0/1:19,0:16:3.98:4,0,405	0/0:26,0:23:31.73:0,32,797	1/1:21,0:21:10.64:547,11,0	0/0:18,0:18:51.17:0,51,1182	0/0:24,0:24:72.24:0,72,1600	1/1:28,0:28:27.56:505,28,0	0/0:17,0:17:51.17:0,51,1153	1/1:20,0:20:14.36:386,14,0	0/1:12,0:12:7.99:399,0,8	1/1:20,0:20:1.11:693,1,0	1/1:13,0:13:7.55:237,8,0	1/1:16,0:16:22.86:676,23,0	0/0:27,0:27:69.23:0,69,1532	0/0:17,0:17:39.12:0,39,810	1/1:15,0:15:12.04:294,12,0	1/1:15,0:15:18.06:555,18,0	1/1:5,18:24:60.20:1384,60,0	1/1:3,10:13:27.09:925,27,0	1/1:1,5:7:3.01:112,3,0	1/1:8,0:8:3.36:74,3,0	0/1:11,0:11:3.42:357,0,3	1/1:13,0:13:11.98:224,12,0	1/1:12,0:12:15.52:431,16,0	1/1:19,0:19:2.09:483,2,0	1/1:2,16:18:26.69:982,27,0	1/1:4,0:4:6.02:156,6,0
chr10	48372997	.	C	CT	6070.84	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-14.484;DP=786;FS=0.709;HRun=1;HaplotypeScore=69.2901;InbreedingCoeff=0.9981;MQ=71.29;MQ0=0;MQRankSum=-2.438;QD=39.68;ReadPosRankSum=1.369;VQSLOD=5.4840;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,111,1424	0/0:6,0:6:18.06:0,18,234	0/0:15,0:15:42.11:0,42,514	0/0:19,0:19:50.81:0,51,683	0/0:41,0:40:99:0,117,1519	0/0:26,0:26:75.23:0,75,953	0/0:29,0:29:87.28:0,87,1127	0/0:40,0:40:99:0,114,1443	0/0:17,0:17:48.16:0,48,623	0/0:32,0:32:96.31:0,96,1246	0/0:20,0:20:54.17:0,54,700	1/1:0,29:29:72.24:1079,72,0	1/1:0,37:37:99:1484,99,0	0/0:33,0:33:96.31:0,96,1245	0/0:41,0:41:99:0,120,1558	0/0:33,0:33:99:0,99,1285	0/0:25,0:25:75.24:0,75,973	0/0:19,0:19:54.17:0,54,696	0/0:19,0:19:57.19:0,57,740	0/0:32,0:32:96.31:0,96,1244	0/0:40,0:40:99:0,120,1542	1/1:0,28:28:75.25:1124,75,0	1/1:1,22:23:63.21:944,63,0	1/1:2,34:35:96.33:1439,96,0	0/0:28,0:28:84.26:0,84,1074	0/0:32,0:32:96.30:0,96,1234	0/0:28,0:27:81.24:0,81,1035	0/0:19,0:19:54.18:0,54,699
chr10	48375239	.	GCACACACACATA	G	2510.32	PASS	AB=0.543;AC=17;AF=0.304;AN=56;BaseQRankSum=4.157;DP=526;FS=1.995;HRun=0;HaplotypeScore=158.0545;InbreedingCoeff=0.8695;MQ=72.08;MQ0=15;MQRankSum=-0.833;QD=17.55;ReadPosRankSum=0.276;VQSLOD=2.7927;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:36:19.47:0,19,2016	0/0:4,0:4:8.98:0,9,73	0/0:26,0:15:16.22:0,16,216	0/0:38,0:19:8.57:0,9,158	1/1:14,1:15:32.99:437,33,0	0/0:11,0:11:18.03:0,18,671	0/0:14,0:14:27.03:0,27,539	0/0:19,0:19:50.98:0,51,612	0/0:15,0:15:42.04:0,42,946	1/1:16,0:16:41.88:358,42,0	1/1:1,16:17:3.01:93,3,0	0/0:22,0:21:51.12:0,51,1657	0/0:26,0:26:48.08:0,48,1311	1/1:0,7:7:3.01:102,3,0	0/0:17,0:17:41.98:0,42,726	0/0:23,0:22:57.03:0,57,1200	1/1:13,0:13:20.83:153,21,0	1/1:18,0:18:34.81:265,35,0	0/0:19,0:18:48.04:0,48,818	0/0:20,0:20:38.76:0,39,999	0/0:30,0:29:33:0,33,654	0/0:10,0:9:18.51:0,19,547	0/0:10,0:10:29.85:0,30,681	0/0:25,0:25:63.02:0,63,1752	0/1:4,19:25:0.94:481,0,1	1/1:5,20:25:59.72:623,60,0	0/0:17,0:16:32.72:0,33,747	1/1:5,0:6:17.95:194,18,0
chr10	48375250	.	T	TACAC	587.62	PASS	AB=0.876;AC=17;AF=0.354;AN=48;BaseQRankSum=-1.494;DP=551;FS=1.193;HRun=0;HaplotypeScore=105.8039;InbreedingCoeff=0.1459;MQ=59.28;MQ0=17;MQRankSum=3.432;QD=2.07;ReadPosRankSum=0.888;VQSLOD=1.7523;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:44,0:44:55.84:56,0,105	0/1:7,0:7:0.13:0,0,34	./.	./.	0/0:13,0:13:2.99:0,3,24	0/0:14,0:14:8:0,8,128	0/0:14,0:13:3.01:0,3,46	1/1:22,0:22:0.57:1,1,0	0/0:16,0:16:6.38:0,6,94	./.	0/0:18,0:17:0:0,0,0	0/1:23,0:23:7.78:80,0,8	0/1:21,0:27:20.30:20,0,43	0/0:8,0:8:0.47:0,0,1	0/0:16,0:17:9.89:0,10,81	0/0:24,0:23:9.01:0,9,118	0/0:14,0:14:2.96:0,3,19	./.	1/1:18,0:17:6.49:105,6,0	1/1:21,0:21:14.80:159,15,0	0/1:16,23:41:19.79:64,0,20	0/1:12,0:11:27.26:27,0,36	1/1:12,0:12:5.99:50,6,0	0/1:18,0:32:42.67:60,0,43	0/0:22,0:22:13.24:0,13,108	0/0:21,0:21:6:0,6,56	1/1:11,9:21:10.20:101,10,0	0/0:6,0:6:0.47:0,0,1
chr10	48379734	.	ACGCGCG	A	3529.66	PASS	AB=0.956;AC=25;AF=0.446;AN=56;BaseQRankSum=-0.058;DP=486;FS=9.461;HRun=0;HaplotypeScore=147.1600;InbreedingCoeff=0.1312;MQ=71.52;MQ0=0;MQRankSum=-6.244;QD=10.93;ReadPosRankSum=0.247;VQSLOD=2.2485;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:77.56:0,78,1143	0/0:5,0:5:8.82:0,9,99	0/0:7,0:5:5.67:0,6,34	0/0:16,0:13:8.48:0,8,66	0/1:25,0:25:13.16:44,0,13	0/0:12,0:15:41.77:0,42,631	0/0:18,0:19:44.98:0,45,733	1/1:7,16:22:45.09:865,45,0	0/0:14,0:14:14.80:0,15,614	0/1:23,0:23:21.60:22,0,184	0/1:20,0:20:25.99:85,0,26	0/1:15,2:17:94.84:245,0,95	0/1:17,1:18:10.43:360,0,10	0/1:15,0:15:12.50:13,0,19	0/0:13,0:13:32.74:0,33,557	0/0:16,0:17:41.72:0,42,622	0/1:31,0:31:69.70:70,0,71	1/1:22,0:22:8.34:51,8,0	1/1:5,1:15:26.72:429,27,0	1/1:4,2:12:5.98:53,6,0	1/1:4,0:14:2.99:23,3,0	0/1:11,0:11:2.71:356,0,3	0/1:11,1:16:29.16:352,0,29	0/1:20,0:22:99:436,0,99	0/1:19,0:19:0.37:73,0,0	0/0:20,0:20:2.18:0,2,120	1/1:2,10:13:1.25:3,1,0	1/1:7,0:7:6:50,6,0
chr10	48379744	.	GCGCACACACA	G	4513.81	PASS	AB=1.000;AC=31;AF=0.554;AN=56;BaseQRankSum=-2.847;DP=471;FS=4.212;HRun=0;HaplotypeScore=162.7113;InbreedingCoeff=-0.0858;MQ=60.81;MQ0=1;MQRankSum=0.038;QD=11.17;ReadPosRankSum=-0.342;VQSLOD=3.6987;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:38,0:38:99:207,0,1623	0/1:4,0:5:11.79:12,0,252	0/0:3,0:1:0:0,0,0	0/0:8,0:5:2.54:0,3,12	1/1:2,23:25:8.88:301,9,0	0/1:17,0:16:29.27:29,0,1131	0/1:18,0:18:80.83:81,0,996	0/1:20,0:19:99:187,0,371	0/1:19,0:19:44.86:45,0,1127	1/1:0,21:22:62.65:846,63,0	1/1:3,18:22:11.84:381,12,0	0/1:16,0:16:20.07:20,0,925	0/1:17,0:17:29.48:29,0,907	1/1:7,0:16:6.02:156,6,0	0/1:11,0:11:43.30:43,0,739	0/1:13,0:13:99:109,0,796	1/1:4,24:28:12.12:427,12,0	1/1:0,18:19:9.03:283,9,0	0/0:12,0:12:12.14:0,12,572	0/0:10,0:10:3.01:0,3,69	0/0:16,0:16:15.05:0,15,483	0/1:10,0:10:51.35:51,0,358	0/1:18,0:18:15.65:16,0,785	0/1:24,0:24:45.56:46,0,1101	1/1:2,17:20:15.04:407,15,0	1/1:1,19:20:47.72:638,48,0	0/0:18,0:18:9.30:0,9,387	1/1:0,5:5:6.02:201,6,0
chr10	48381117	.	G	GA	4812.63	PASS	AB=0.895;AC=19;AF=0.339;AN=56;BaseQRankSum=-11.477;DP=592;FS=0.000;HRun=10;HaplotypeScore=66.0681;InbreedingCoeff=0.8591;MQ=66.66;MQ0=7;MQRankSum=-1.071;QD=20.48;ReadPosRankSum=1.920;VQSLOD=5.7333;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,1:35:57.89:0,58,682	0/0:10,1:11:0.99:0,1,212	0/0:26,0:14:31.48:0,31,233	0/0:21,0:12:12.50:0,12,121	1/1:5,24:29:44.45:654,44,0	0/0:16,0:14:38.96:0,39,320	0/0:13,0:13:32.94:0,33,271	0/0:6,0:30:50.92:0,51,147	0/0:14,0:14:35.92:0,36,292	1/1:8,20:28:38.54:614,39,0	1/1:5,20:24:20.44:409,20,0	0/0:19,0:19:43.97:0,44,351	0/0:20,0:22:54.97:0,55,425	1/1:2,13:16:35.96:364,36,0	0/0:14,0:14:29.95:0,30,246	0/0:17,1:18:12.94:0,13,313	1/1:5,23:27:47.54:711,48,0	1/1:8,30:38:60.80:849,61,0	0/1:15,2:17:30.41:30,0,230	0/0:33,1:34:62.91:0,63,710	0/0:16,0:16:35.96:0,36,296	0/0:12,0:12:32.96:0,33,271	0/0:12,0:12:29.95:0,30,246	0/0:14,0:11:26.94:0,27,222	1/1:6,12:18:9.01:296,9,0	1/1:5,25:31:56.39:789,56,0	0/0:25,0:26:57.77:0,58,455	1/1:2,3:4:9.02:96,9,0
chr10	48384818	.	A	AT	10883.44	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-12.623;DP=615;FS=1.126;HRun=9;HaplotypeScore=58.9511;InbreedingCoeff=0.9946;MQ=72.41;MQ0=0;MQRankSum=-0.668;QD=24.96;ReadPosRankSum=1.029;VQSLOD=5.6203;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,1:29:44.54:0,45,604	0/0:9,0:9:20.99:0,21,182	0/0:16,0:15:17.93:0,18,151	0/0:11,0:11:24.44:0,24,226	1/1:4,34:38:67.07:929,67,0	0/0:18,0:18:53.99:0,54,469	0/0:19,0:19:50.98:0,51,443	1/1:9,27:37:83.97:869,84,0	0/0:31,0:31:86.96:0,87,751	1/1:7,22:29:48.93:728,49,0	1/1:5,16:21:45.09:485,45,0	1/1:5,20:25:57.15:630,57,0	1/1:4,21:25:37.11:638,37,0	1/1:2,17:19:51.14:563,51,0	0/0:28,0:28:71.98:0,72,625	0/0:18,0:18:50.97:0,51,439	1/1:3,18:21:51.14:564,51,0	1/1:2,13:15:35.46:373,35,0	1/1:3,14:17:20.16:430,20,0	1/1:8,21:29:60.12:650,60,0	1/1:1,17:18:45.12:498,45,0	1/1:1,17:18:48.13:531,48,0	1/1:1,19:20:54.15:597,54,0	1/1:3,8:11:18.05:199,18,0	1/1:5,15:20:42.11:465,42,0	1/1:3,23:26:57.12:611,57,0	1/1:4,20:24:25.08:505,25,0	1/1:3,20:23:19.92:617,20,0
chr10	48385866	.	AACACACACACACACACACACAC	A	2225.85	PASS	AB=0.822;AC=8;AF=0.154;AN=52;BaseQRankSum=4.881;DP=572;FS=19.434;HRun=0;HaplotypeScore=278.0289;InbreedingCoeff=0.3330;MQ=66.29;MQ0=11;MQRankSum=-5.406;QD=17.25;ReadPosRankSum=0.446;VQSLOD=1.0199;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:38:29.31:0,29,2795	0/0:2,0:2:6.02:0,6,520	0/0:32,0:23:3.01:0,3,44	0/0:30,0:23:6.02:0,6,213	0/0:7,0:13:18.06:0,18,705	0/0:18,0:18:30.10:0,30,2433	0/0:26,0:26:29.69:0,30,2403	0/1:26,0:26:82.70:83,0,349	0/0:16,0:16:27.09:0,27,1878	0/0:18,0:20:36.12:0,36,1447	0/0:10,0:14:18.06:0,18,689	1/1:12,10:21:15.01:715,15,0	1/1:12,11:23:24.08:1390,24,0	0/0:13,0:19:15.03:0,15,438	0/0:28,0:28:27.09:0,27,2147	0/0:17,0:29:27.07:0,27,1769	0/0:9,0:9:8.90:0,9,409	0/0:15,0:16:31.89:0,32,1436	0/1:13,0:17:15.11:15,0,198	0/1:6,0:14:48.57:49,0,267	0/0:17,0:27:18.06:0,18,430	./.	./.	0/0:24,4:29:0.47:0,0,1	0/0:8,0:11:16.66:0,17,884	0/0:16,0:22:47.36:0,47,1980	0/1:22,0:25:99:116,0,269	0/0:12,0:15:15.05:0,15,677
chr10	48386959	.	T	TTGA	500.30	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-4.088;DP=253;FS=0.000;HRun=0;HaplotypeScore=38.6634;InbreedingCoeff=0.8328;MQ=85.42;MQ0=0;MQRankSum=-2.244;QD=45.48;ReadPosRankSum=-3.961;VQSLOD=2.8809;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:5:15.05:0,15,245	0/0:6,0:6:15.05:0,15,240	0/0:9,0:9:21.07:0,21,338	0/0:7,0:7:14.78:0,15,177	0/0:13,0:13:39.13:0,39,632	0/0:6,0:6:18.05:0,18,270	0/0:7,0:7:21.07:0,21,343	1/1:3,8:11:27.09:594,27,0	0/0:4,0:4:12.04:0,12,196	0/0:17,0:17:48.16:0,48,764	0/0:8,0:8:21.06:0,21,319	0/0:10,0:10:30.10:0,30,484	0/0:8,0:8:21.07:0,21,343	0/0:5,0:5:15.05:0,15,245	0/0:13,0:13:39.13:0,39,637	0/0:4,0:4:12.04:0,12,196	0/0:14,0:14:21.07:0,21,343	0/0:7,0:7:21.07:0,21,343	0/0:13,0:13:39.13:0,39,631	0/0:14,0:14:36.12:0,36,582	0/0:10,0:10:30.10:0,30,490	0/0:5,0:5:15.05:0,15,245	0/0:12,0:12:36.12:0,36,583	0/0:5,0:5:15.05:0,15,245	0/0:8,0:8:24.08:0,24,392	0/0:8,0:8:21.07:0,21,343	0/0:13,0:13:36.12:0,36,588	0/0:11,0:11:33.10:0,33,515
chr10	48387011	.	T	TGTGT	777.95	PASS	AC=16;AF=0.348;AN=46;BaseQRankSum=0.645;DP=134;FS=4.350;HRun=0;HaplotypeScore=26.3181;InbreedingCoeff=0.6630;MQ=74.52;MQ0=1;MQRankSum=0.819;QD=18.97;ReadPosRankSum=0.738;VQSLOD=2.6407;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	0/0:2,0:2:6.01:0,6,74	0/0:6,0:4:6.02:0,6,101	0/0:15,0:6:6.20:0,6,35	1/1:6,0:6:12.04:192,12,0	0/0:2,0:2:5.99:0,6,49	0/0:4,0:4:9.03:0,9,144	0/0:17,0:17:39.08:0,39,621	./.	1/1:4,0:4:9.03:160,9,0	1/1:1,0:1:3.01:48,3,0	0/0:5,0:5:12.04:0,12,193	0/0:5,0:5:6.02:0,6,89	./.	0/0:3,0:3:6.02:0,6,97	0/0:2,0:2:6.02:0,6,97	1/1:2,10:13:2.94:18,3,0	1/1:5,0:4:9.03:134,9,0	0/0:8,0:8:18.05:0,18,260	0/0:6,0:6:18.06:0,18,256	0/0:2,0:2:3.01:0,3,47	./.	0/0:5,0:5:9.03:0,9,146	./.	1/1:3,0:3:3.01:49,3,0	1/1:4,0:4:6.02:104,6,0	0/0:8,0:8:17.88:0,18,258	1/1:5,0:5:15.05:232,15,0
chr10	48387014	.	GTATATATATATATATATATA	G	886.03	PASS	AC=6;AF=0.300;AN=20;BaseQRankSum=2.774;DP=120;FS=2.098;HRun=0;HaplotypeScore=59.8990;InbreedingCoeff=0.5177;MQ=76.08;MQ0=1;MQRankSum=-0.792;QD=42.19;ReadPosRankSum=1.030;VQSLOD=2.1949;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	0/0:15,0:6:0.89:0,1,2	0/0:5,0:5:3.01:0,3,62	./.	./.	0/0:16,0:16:15.05:0,15,711	./.	./.	./.	0/0:4,0:4:3.01:0,3,163	0/0:2,0:3:6.02:0,6,456	./.	./.	./.	./.	0/0:5,0:4:6.02:0,6,357	1/1:5,2:7:6.02:265,6,0	1/1:4,2:6:6.02:233,6,0	./.	./.	./.	./.	./.	./.	1/1:3,5:8:8.65:483,9,0	0/0:5,0:5:3.01:0,3,123
chr10	48387997	.	T	TA	6035.20	PASS	AB=0.677;AC=26;AF=0.464;AN=56;BaseQRankSum=-3.981;DP=586;FS=0.721;HRun=10;HaplotypeScore=72.9515;InbreedingCoeff=0.8005;MQ=69.27;MQ0=0;MQRankSum=-0.703;QD=18.74;ReadPosRankSum=-1.801;VQSLOD=4.8463;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:29.95:0,30,246	0/0:13,0:13:38.93:0,39,316	0/0:7,0:7:8.98:0,9,73	0/0:13,0:13:24.69:0,25,163	1/1:13,23:36:22.77:637,23,0	0/0:19,0:19:50.93:0,51,416	0/0:19,0:20:55.95:0,56,446	1/1:10,17:28:32.31:525,32,0	0/0:12,0:12:26.94:0,27,222	1/1:2,28:30:78.15:807,78,0	1/1:1,13:14:33.04:339,33,0	0/0:26,0:27:58.93:0,59,474	0/0:28,0:30:69.98:0,70,553	1/1:1,9:10:2.43:231,2,0	0/0:23,0:26:51.99:0,52,403	0/0:16,0:17:43.97:0,44,351	0/1:9,17:26:15.90:456,0,16	0/1:6,3:9:55.89:78,0,56	1/1:6,11:17:33.08:351,33,0	1/1:7,16:23:14.45:359,14,0	1/1:6,21:27:20.47:423,20,0	0/0:26,0:26:65.89:0,66,542	0/0:31,0:31:68.91:0,69,567	0/0:10,0:10:29.97:0,30,246	1/1:2,21:23:48.12:512,48,0	1/1:10,18:28:4.87:463,5,0	1/1:16,25:42:44.36:662,44,0	1/1:3,6:9:18.05:192,18,0
chr10	48389465	.	CT	C	536.56	PASS	AB=0.779;AC=8;AF=0.160;AN=50;BaseQRankSum=-0.344;DP=389;FS=5.054;HRun=2;HaplotypeScore=50.1902;InbreedingCoeff=-0.2430;MQ=29.28;MQ0=125;MQRankSum=-4.872;QD=4.10;ReadPosRankSum=4.525;VQSLOD=0.8151;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:10:23.95:0,24,282	0/0:2,0:2:3.01:0,3,41	./.	./.	0/1:14,7:17:49.12:49,0,296	0/0:19,0:11:18.01:0,18,208	0/0:16,0:6:15.03:0,15,187	./.	0/0:15,0:7:17.96:0,18,205	0/1:2,4:5:25.83:140,0,26	0/1:11,6:8:62.29:62,0,96	0/0:8,0:5:6.02:0,6,85	0/0:18,0:12:27.09:0,27,386	0/1:14,4:13:65.41:65,0,313	0/0:18,0:14:38.91:0,39,449	0/0:13,0:11:23.49:0,23,337	0/1:16,3:10:56.27:56,0,189	0/1:8,1:5:29.74:30,0,53	0/0:9,0:3:9.03:0,9,124	0/0:11,0:6:14.78:0,15,158	0/0:9,0:3:5.98:0,6,54	0/0:12,0:4:6.02:0,6,80	0/0:13,0:6:12.04:0,12,168	0/0:20,0:6:9.03:0,9,129	0/1:14,7:12:88.08:169,0,88	0/1:15,4:12:92.92:93,0,190	0/0:22,0:17:44.90:0,45,582	0/0:18,1:14:0.42:0,0,474
chr10	48389514	.	C	CTCT	447.64	PASS	AB=1.000;AC=18;AF=0.409;AN=44;BaseQRankSum=1.648;DP=271;FS=0.000;HRun=0;HaplotypeScore=57.3663;InbreedingCoeff=-0.2806;MQ=19.09;MQ0=81;MQRankSum=1.733;QD=3.47;ReadPosRankSum=0.037;VQSLOD=0.6896;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:5:8.69:0,9,56	0/0:3,0:3:6:0,6,55	0/0:45,0:3:5.14:0,5,37	./.	0/1:15,0:11:17.16:34,0,17	0/1:11,0:9:7.71:8,0,9	./.	./.	0/1:5,0:3:6.12:6,0,12	0/1:18,0:14:99:108,0,137	0/0:7,0:5:2.60:0,3,37	./.	./.	0/1:8,0:6:38.03:38,0,56	0/1:6,0:5:19.48:39,0,19	0/1:5,0:5:37.94:44,0,38	0/0:7,0:3:3.01:0,3,30	0/0:3,0:2:2.48:0,2,24	1/1:5,0:1:2.99:23,3,0	1/1:3,4:5:5.51:146,6,0	1/1:5,0:1:2.97:20,3,0	0/0:5,0:3:5.88:0,6,36	0/1:5,0:4:26.36:26,0,31	./.	0/1:11,0:7:4.32:4,0,12	0/1:9,0:7:54.37:54,0,55	0/1:7,0:5:6.15:6,0,104	0/1:7,0:4:20.03:20,0,84
chr10	48389523	.	C	CTCT	846.30	PASS	AB=0.971;AC=27;AF=0.587;AN=46;BaseQRankSum=1.379;DP=252;FS=0.000;HRun=0;HaplotypeScore=51.9364;InbreedingCoeff=-0.2040;MQ=18.16;MQ0=80;MQRankSum=2.060;QD=4.86;ReadPosRankSum=0.892;VQSLOD=1.5977;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:4:5.80:0,6,32	1/1:2,0:2:3.84:13,4,0	0/1:45,0:3:28.43:28,0,45	./.	0/1:13,1:10:29.92:100,0,30	1/1:11,0:7:4.91:16,5,0	0/0:5,0:1:2.92:0,3,17	1/1:6,0:1:0.47:1,0,0	1/1:5,0:3:5.75:32,6,0	0/1:16,1:13:16.69:183,0,17	0/0:6,0:4:1.20:0,1,11	./.	./.	0/1:7,1:5:16.02:92,0,16	0/1:4,0:3:20.31:20,0,41	0/1:6,0:5:9.24:84,0,9	1/1:4,0:2:2.50:9,2,0	1/1:3,0:2:3.86:23,4,0	./.	1/1:6,0:4:10.28:155,10,0	1/1:6,0:1:2.97:20,3,0	0/0:5,0:3:5.83:0,6,33	0/1:5,0:4:26.49:26,0,28	./.	0/1:8,0:4:4.07:38,0,4	0/1:9,1:7:36.86:108,0,37	0/1:8,0:5:8.87:9,0,18	0/1:6,0:3:13.85:22,0,14
chr10	48389544	.	CTCT	C	169.66	PASS	AB=0.952;AC=15;AF=0.357;AN=42;BaseQRankSum=1.703;DP=171;FS=0.000;HRun=0;HaplotypeScore=46.9631;InbreedingCoeff=-0.1867;MQ=19.61;MQ0=47;MQRankSum=-0.361;QD=2.32;ReadPosRankSum=-0.847;VQSLOD=1.3122;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:5,2:3:2.96:0,3,19	0/0:2,0:2:5.69:0,6,50	0/0:17,0:2:5.04:0,5,38	./.	0/1:9,0:6:14.96:63,0,15	0/0:9,0:5:3.14:0,3,20	0/0:4,0:1:3.01:0,3,41	0/0:8,0:1:3.01:0,3,54	1/1:3,0:2:2.98:21,3,0	0/1:10,3:9:56.39:94,0,56	0/0:4,0:4:6.36:0,6,56	./.	./.	0/0:5,0:4:8.48:0,8,96	0/1:4,0:3:8.89:9,0,14	1/1:6,0:5:2.65:20,3,0	0/0:3,0:2:3.01:0,3,42	1/1:2,0:1:0.89:2,1,0	./.	0/1:6,0:3:11.16:30,0,11	./.	./.	0/1:4,0:3:9.58:10,0,15	./.	0/1:7,0:5:5.62:6,0,14	0/1:8,1:7:13.75:14,0,54	0/1:5,1:4:14.68:15,0,134	0/1:4,0:3:6.87:7,0,54
chr10	48390033	.	CA	C	6987.99	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-3.384;DP=253;FS=43.505;HRun=1;HaplotypeScore=63.9880;InbreedingCoeff=0.6481;MQ=45.27;MQ0=6;MQRankSum=-1.543;QD=30.92;ReadPosRankSum=1.961;VQSLOD=2.1565;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,14:14:33.11:460,33,0	1/1:0,4:4:12.04:167,12,0	0/0:14,1:0:3.01:0,3,42	0/0:9,1:4:14.83:0,15,168	1/1:0,5:4:12.04:167,12,0	1/1:0,13:11:32.78:430,33,0	1/1:1,21:22:65.85:869,66,0	1/1:2,5:7:18.40:164,18,0	1/1:0,12:12:30.10:408,30,0	1/1:0,10:9:27.09:366,27,0	1/1:0,4:4:12.04:158,12,0	1/1:1,4:5:11.04:107,11,0	1/1:1,8:9:23.80:279,24,0	1/1:1,7:8:24.08:327,24,0	1/1:0,12:12:27.09:376,27,0	1/1:0,13:13:29.83:389,30,0	1/1:0,6:6:11.99:144,12,0	1/1:0,9:9:21.05:273,21,0	1/1:0,11:11:30.10:420,30,0	1/1:0,2:1:3.01:42,3,0	1/1:2,6:6:7.57:87,8,0	1/1:0,8:8:24.03:296,24,0	1/1:0,6:6:18.06:251,18,0	1/1:0,13:14:2.04:6,2,0	1/1:0,11:11:27.09:361,27,0	1/1:0,9:9:27.05:357,27,0	1/1:0,4:4:6.02:83,6,0	0/0:1,0:1:2.37:0,2,8
chr10	48393078	.	G	GGTTT	7847.16	PASS	AB=0.809;AC=24;AF=0.429;AN=56;BaseQRankSum=-10.713;DP=586;FS=16.439;HRun=0;HaplotypeScore=95.6424;InbreedingCoeff=0.7034;MQ=68.82;MQ0=1;MQRankSum=1.062;QD=27.53;ReadPosRankSum=0.151;VQSLOD=3.3708;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:63.19:0,63,957	0/0:11,0:11:21.07:0,21,334	0/1:36,0:28:10.85:11,0,175	0/0:37,0:26:20.69:0,21,261	1/1:7,10:19:33.07:724,33,0	0/0:23,0:23:48.15:0,48,742	0/0:24,0:24:39.13:0,39,621	0/0:25,0:26:30.06:0,30,414	0/0:14,0:14:42.12:0,42,644	0/1:12,6:19:20.70:484,0,21	1/1:7,7:16:30.10:677,30,0	0/0:12,0:12:15.05:0,15,239	0/0:22,0:22:42.14:0,42,668	1/1:6,17:24:45.15:1058,45,0	0/0:24,0:24:39.13:0,39,609	0/0:24,0:24:54.18:0,54,860	1/1:12,13:26:36.12:819,36,0	1/1:6,12:18:30.10:718,30,0	0/1:17,1:19:15.94:145,0,16	1/1:5,7:14:30.06:601,30,0	1/1:8,14:24:21.07:500,21,0	0/0:17,0:17:27.09:0,27,415	0/0:16,0:16:30.10:0,30,477	0/0:21,0:21:45.14:0,45,693	0/1:6,14:21:17.74:532,0,18	1/1:7,13:20:39.60:934,40,0	1/1:8,7:17:18.06:430,18,0	1/1:8,3:11:9.03:215,9,0
chr10	48395092	.	T	TC	4463.92	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-4.838;DP=770;FS=3.820;HRun=5;HaplotypeScore=106.4612;InbreedingCoeff=0.9983;MQ=80.43;MQ0=0;MQRankSum=-1.517;QD=34.34;ReadPosRankSum=1.356;VQSLOD=4.1819;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,132,1399	0/0:7,0:7:21.05:0,21,226	0/0:16,0:16:24.88:0,25,295	0/0:25,0:25:33.74:0,34,375	0/0:36,0:36:99:0,105,1085	0/0:25,0:25:69.17:0,69,741	0/0:28,0:28:75.14:0,75,782	0/0:36,0:36:93.22:0,93,993	0/0:28,0:28:84.21:0,84,903	0/0:38,0:38:86.37:0,86,876	0/0:19,0:19:57.14:0,57,599	1/1:4,28:32:52.20:1034,52,0	1/1:0,28:28:72.23:947,72,0	0/0:32,0:32:86.25:0,86,900	0/0:38,0:38:99:0,105,1112	0/0:45,0:45:99:0,135,1451	0/0:26,0:26:72.16:0,72,753	0/0:24,0:24:63.63:0,64,669	0/0:14,0:14:33.07:0,33,348	0/0:13,0:13:39.10:0,39,419	0/0:33,0:33:93.21:0,93,990	1/1:1,23:24:69.22:907,69,0	1/1:1,21:22:60.03:787,60,0	1/1:2,22:24:60.20:790,60,0	0/0:34,0:33:96.22:0,96,1007	0/0:38,0:38:99:0,99,1037	0/0:23,0:23:63.13:0,63,661	0/0:9,0:9:27.07:0,27,284
chr10	48395341	.	C	CA	2510.53	PASS	AB=0.678;AC=16;AF=0.286;AN=56;BaseQRankSum=7.415;DP=605;FS=26.191;HRun=0;HaplotypeScore=92.3231;InbreedingCoeff=0.8046;MQ=79.70;MQ0=0;MQRankSum=-1.474;QD=11.36;ReadPosRankSum=-0.295;VQSLOD=1.9515;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:90.23:0,90,1227	0/0:8,0:8:24.04:0,24,300	0/0:17,0:16:31.86:0,32,432	0/0:16,0:14:11.51:0,12,127	0/1:26,15:42:50.97:408,0,51	0/0:23,0:23:66.18:0,66,878	0/0:23,0:23:69.23:0,69,962	0/0:27,0:27:74.40:0,74,748	0/0:22,0:22:46.09:0,46,758	1/1:13,12:25:38.20:344,38,0	1/1:6,11:18:2.24:218,2,0	0/0:22,0:22:40.85:0,41,333	0/0:20,0:20:26.63:0,27,269	1/1:6,20:27:10.33:214,10,0	0/0:30,0:30:75.19:0,75,1004	0/0:28,0:28:78.21:0,78,1029	1/1:5,20:25:36.14:356,36,0	1/1:4,19:23:11.50:308,12,0	0/0:11,0:11:29.21:0,29,278	0/0:15,0:15:41.73:0,42,374	0/0:14,0:14:35.96:0,36,354	0/0:19,0:19:50.81:0,51,479	0/0:26,0:26:59.05:0,59,537	0/0:23,0:23:52.40:0,52,493	1/1:3,13:17:30.36:252,30,0	1/1:7,25:32:16.21:442,16,0	0/0:9,0:8:27.02:0,27,328	0/1:5,7:12:1.78:161,0,2
chr10	48395342	.	C	CA	5725.46	PASS	AB=0.727;AC=35;AF=0.625;AN=56;BaseQRankSum=2.006;DP=612;FS=8.401;HRun=12;HaplotypeScore=79.0613;InbreedingCoeff=0.5364;MQ=80.14;MQ0=0;MQRankSum=-0.568;QD=12.92;ReadPosRankSum=-4.853;VQSLOD=2.9470;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:31:41.75:0,42,421	0/0:8,0:8:23.84:0,24,172	0/0:15,0:16:2.91:0,3,26	0/0:17,0:15:2.40:0,2,21	0/1:41,0:42:3.43:485,0,3	0/0:19,1:22:19.61:0,20,289	0/0:23,0:23:50.65:0,51,368	1/1:7,20:29:18.86:449,19,0	0/0:21,1:23:5.62:0,6,300	1/1:25,0:25:45.92:415,46,0	1/1:18,0:18:17.71:284,18,0	1/1:4,21:25:33:311,33,0	0/1:4,16:20:19.98:142,0,20	1/1:28,0:28:23.26:265,23,0	0/1:27,4:31:1.85:2,0,312	0/0:26,1:28:38.39:0,38,430	1/1:26,0:26:47.95:441,48,0	1/1:23,0:23:20.63:328,21,0	1/1:3,8:11:15.87:190,16,0	1/1:3,11:15:29.85:268,30,0	0/1:5,6:13:18.39:122,0,18	1/1:6,14:20:25.18:369,25,0	1/1:7,19:26:4.75:366,5,0	0/1:8,16:24:23.57:279,0,24	1/1:17,0:17:32.76:283,33,0	1/1:29,0:29:33.24:497,33,0	1/1:7,1:8:2.17:53,2,0	1/1:12,0:12:6.40:178,6,0
chr10	48400159	.	TC	T	4303.15	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=14.735;DP=514;FS=19.255;HRun=8;HaplotypeScore=69.7306;InbreedingCoeff=0.9528;MQ=70.43;MQ0=0;MQRankSum=-2.311;QD=24.18;ReadPosRankSum=3.038;VQSLOD=3.5534;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:43:99:0,117,1377	0/0:4,0:4:12.04:0,12,145	0/0:14,0:13:0.83:0,1,223	0/0:12,0:12:16.39:0,16,243	1/1:3,22:25:60.09:579,60,0	0/0:16,0:16:36.11:0,36,435	0/0:27,0:28:65.91:0,66,741	0/0:21,0:21:36.11:0,36,435	0/0:7,0:7:18.04:0,18,206	1/1:2,15:17:39.06:376,39,0	1/1:3,24:27:65.14:614,65,0	0/0:21,0:21:60.17:0,60,715	0/0:13,0:13:36.03:0,36,394	1/1:1,15:16:42.07:405,42,0	0/0:22,0:22:60.18:0,60,725	0/0:19,0:19:51.10:0,51,599	1/1:2,25:27:66.06:628,66,0	1/1:1,21:22:54.08:521,54,0	0/0:16,0:16:39.10:0,39,448	0/0:11,0:11:30.09:0,30,357	0/0:24,1:25:32.04:0,32,624	0/0:10,0:10:27.08:0,27,326	0/0:14,0:14:33.10:0,33,398	0/0:18,0:18:48.13:0,48,567	1/1:1,15:16:42.07:405,42,0	1/1:0,22:22:66.09:630,66,0	0/0:21,0:21:63.05:0,63,705	1/1:1,5:6:15.02:145,15,0
chr10	48401038	.	C	CTGTTTTT	14732.07	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-7.015;DP=815;FS=8.030;HRun=0;HaplotypeScore=180.2347;InbreedingCoeff=0.9962;MQ=66.02;MQ0=0;MQRankSum=-15.243;QD=56.66;ReadPosRankSum=-2.520;VQSLOD=3.7693;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:78.22:0,78,1703	0/0:19,0:19:51.16:0,51,1123	0/0:17,0:17:21.54:0,22,443	0/0:15,0:14:15.05:0,15,327	1/1:17,15:34:51.12:1346,51,0	0/0:32,0:32:72.23:0,72,1612	0/0:23,0:23:54.14:0,54,1171	0/0:29,0:29:60.20:0,60,1326	0/0:29,0:29:60.19:0,60,1358	1/1:21,18:41:69.17:2137,69,0	1/1:12,24:36:72.20:2191,72,0	0/0:39,0:39:99:0,99,2281	0/0:41,0:41:99:0,105,2365	1/1:14,8:25:33.11:1110,33,0	0/0:45,0:45:99:0,120,2646	0/0:31,0:31:78.24:0,78,1698	1/1:14,7:23:30.10:1039,30,0	1/1:11,4:17:24.08:776,24,0	0/0:30,0:30:66.20:0,66,1416	0/0:29,0:29:59.96:0,60,1365	0/0:28,0:28:66.23:0,66,1466	0/0:24,0:24:60.19:0,60,1323	0/0:30,0:30:75.26:0,75,1712	0/0:24,0:24:63.19:0,63,1381	1/1:11,23:35:75.26:2659,75,0	1/1:13,21:36:78.21:2646,78,0	0/0:33,0:33:81.28:0,81,1878	1/1:5,8:13:24.08:827,24,0
chr10	48401783	.	AGGG	A	3900.61	PASS	AB=0.742;AC=16;AF=0.286;AN=56;BaseQRankSum=12.788;DP=511;FS=1.880;HRun=5;HaplotypeScore=113.4193;InbreedingCoeff=0.8549;MQ=67.07;MQ0=7;MQRankSum=-9.575;QD=26.53;ReadPosRankSum=0.519;VQSLOD=0.5471;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:66.22:0,66,1463	0/0:6,0:6:18.06:0,18,392	0/0:29,0:18:37.39:0,37,619	0/0:36,0:25:42.73:0,43,523	1/1:3,25:27:44.94:544,45,0	0/0:15,0:15:42.12:0,42,835	0/0:36,0:36:99:0,99,2006	0/0:17,0:16:42.03:0,42,714	0/0:16,0:16:45.08:0,45,841	1/1:2,17:19:45.02:571,45,0	1/1:0,11:11:21:286,21,0	0/0:11,0:11:5.84:0,6,484	0/0:16,0:16:45.15:0,45,989	1/1:0,14:14:30.10:460,30,0	0/0:14,0:14:35.69:0,36,759	0/0:14,0:14:42.12:0,42,820	0/1:6,15:20:6.47:320,0,6	0/1:8,0:9:2.19:67,0,2	0/0:17,0:17:44.79:0,45,834	0/0:11,0:11:30.09:0,30,645	0/0:35,1:36:81.76:0,82,1917	0/0:17,0:17:51.16:0,51,1009	0/0:14,0:14:42.12:0,42,788	0/0:19,0:19:41.51:0,42,765	1/1:2,11:13:33.11:534,33,0	1/1:2,25:27:37.16:882,37,0	0/0:14,0:14:39.11:0,39,793	1/1:1,4:5:15.05:235,15,0
chr10	48402781	.	GA	G	7032.69	PASS	AB=0.749;AC=38;AF=0.679;AN=56;BaseQRankSum=8.496;DP=555;FS=5.436;HRun=11;HaplotypeScore=67.2904;InbreedingCoeff=0.7742;MQ=73.19;MQ0=0;MQRankSum=-2.154;QD=18.13;ReadPosRankSum=-0.574;VQSLOD=5.6842;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,1:33:29.95:0,30,675	0/0:11,1:12:11.44:0,11,321	0/1:16,2:15:19.32:19,0,200	0/0:26,0:24:1.07:0,1,211	1/1:3,24:28:70.95:572,71,0	0/0:28,0:30:68.82:0,69,692	0/0:15,1:16:8.44:0,8,295	1/1:3,22:25:65.90:537,66,0	0/0:13,0:14:35.92:0,36,365	1/1:3,17:20:50.91:419,51,0	1/1:3,17:20:50.93:419,51,0	1/1:1,9:11:29:228,29,0	1/1:1,20:21:47.93:394,48,0	1/1:3,10:13:20.97:172,21,0	0/0:14,1:17:11.11:0,11,292	0/0:17,1:18:26.48:0,26,487	1/1:2,19:21:44.94:370,45,0	1/1:3,18:21:21.95:387,22,0	0/1:6,12:19:13.47:240,0,13	1/1:3,20:23:56.92:468,57,0	1/1:1,9:11:26.01:203,26,0	1/1:3,21:25:58.79:464,59,0	1/1:2,14:17:37.99:302,38,0	1/1:1,14:15:38.95:320,39,0	1/1:8,17:26:52.97:425,53,0	1/1:1,18:20:55.97:449,56,0	1/1:2,25:28:64.94:523,65,0	1/1:0,5:5:14.98:123,15,0
chr10	48403949	.	CA	C	2181.70	PASS	AB=0.774;AC=20;AF=0.357;AN=56;BaseQRankSum=9.259;DP=542;FS=19.684;HRun=13;HaplotypeScore=66.7902;InbreedingCoeff=0.6486;MQ=75.25;MQ0=0;MQRankSum=0.171;QD=9.24;ReadPosRankSum=2.900;VQSLOD=1.0375;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,2:37:49.26:0,49,773	0/0:8,0:9:23.87:0,24,219	0/1:17,1:16:7.18:7,0,135	0/0:11,0:11:9.06:0,9,86	0/0:30,3:32:34.07:0,34,620	0/0:16,2:19:19.99:0,20,342	0/0:17,1:18:23.11:0,23,365	1/1:8,8:18:6.07:160,6,0	0/0:9,0:9:18.01:0,18,166	0/0:24,0:28:58.42:0,58,547	0/0:20,3:23:13.23:0,13,435	1/1:2,12:14:32.81:241,33,0	1/1:5,13:18:2.44:173,2,0	0/0:13,0:13:23.97:0,24,216	0/0:21,0:22:56.93:0,57,540	0/0:22,0:22:63.10:0,63,613	0/0:20,1:22:25.90:0,26,379	0/1:22,3:24:5.67:6,0,418	1/1:3,13:16:38.76:284,39,0	1/1:9,17:27:26.14:332,26,0	0/1:7,6:13:60.78:100,0,61	1/1:8,17:26:43.29:312,43,0	0/1:6,17:24:28.91:241,0,29	1/1:2,16:18:38.75:285,39,0	0/0:12,0:15:32.86:0,33,294	0/0:17,0:20:39.30:0,39,333	1/1:6,13:19:32.69:241,33,0	0/0:5,0:5:12.02:0,12,117
chr10	48404392	.	T	TCA	8599.36	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=13.365;DP=783;FS=17.376;HRun=0;HaplotypeScore=148.1851;InbreedingCoeff=0.9997;MQ=76.19;MQ0=4;MQRankSum=-2.025;QD=40.37;ReadPosRankSum=4.781;VQSLOD=5.0028;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,108,1603	0/0:15,0:15:42.14:0,42,643	0/0:42,0:38:92.92:0,93,1268	0/0:41,0:29:75.39:0,75,1015	1/1:3,32:35:80.85:1367,81,0	0/0:30,0:30:84.29:0,84,1278	0/0:31,0:31:90.31:0,90,1367	0/0:32,0:32:93.32:0,93,1418	0/0:24,0:24:69.23:0,69,1056	1/1:1,17:19:51.14:807,51,0	1/1:2,18:20:45.10:761,45,0	0/0:26,0:26:60.20:0,60,915	0/0:23,0:23:60.16:0,60,853	1/1:3,20:23:63.17:1046,63,0	0/0:30,0:30:87.26:0,87,1287	0/0:31,0:31:90.29:0,90,1354	1/1:1,27:28:69.24:1166,69,0	1/1:1,16:19:45.63:759,46,0	0/0:21,0:21:63.20:0,63,918	0/0:28,0:28:81.27:0,81,1235	0/0:34,0:34:96.33:0,96,1464	0/0:26,0:26:72.23:0,72,1078	0/0:30,0:30:75.21:0,75,1101	0/0:26,0:26:60.19:0,60,894	1/1:4,27:33:65.65:1110,66,0	1/1:1,25:28:73.41:1183,73,0	0/0:41,0:40:99:0,123,1874	1/1:0,8:8:24.08:401,24,0
chr10	48404414	.	G	GCACA	5641.47	PASS	AB=1.000;AC=14;AF=0.250;AN=56;BaseQRankSum=-7.119;DP=861;FS=18.783;HRun=0;HaplotypeScore=200.2876;InbreedingCoeff=0.6226;MQ=61.27;MQ0=10;MQRankSum=0.795;QD=19.86;ReadPosRankSum=3.027;VQSLOD=3.3003;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:42:99:0,99,1543	0/0:13,0:13:36.11:0,36,572	0/1:50,0:28:21.24:21,0,249	0/0:35,0:14:6.07:0,6,197	0/1:40,0:40:17.57:18,0,437	0/0:21,0:24:54.17:0,54,852	0/0:33,0:34:53.15:0,53,886	0/0:17,0:36:48.44:0,48,451	0/0:23,0:24:48.14:0,48,746	0/1:21,0:21:50.14:50,0,223	0/0:19,0:19:48.02:0,48,481	1/1:6,19:28:41.88:976,42,0	1/1:6,14:27:47.49:882,47,0	0/0:29,0:29:72.15:0,72,779	0/0:36,0:37:99:0,102,1648	0/0:32,0:34:84.25:0,84,1305	0/0:37,0:37:27.88:0,28,640	0/1:25,0:25:3.22:3,0,321	0/0:12,0:12:22.26:0,22,323	0/0:29,0:31:72.24:0,72,1161	0/0:41,0:45:88.07:0,88,1554	1/1:6,21:29:41.85:1000,42,0	1/1:8,22:33:59.43:1418,59,0	1/1:3,25:31:53.92:1274,54,0	0/0:39,0:39:62.65:0,63,636	0/0:34,0:33:41.32:0,41,613	0/0:41,0:40:93.29:0,93,1467	0/0:10,0:10:9.82:0,10,119
chr10	48405759	.	T	TGG	2333.13	PASS	AB=0.759;AC=19;AF=0.339;AN=56;BaseQRankSum=-4.631;DP=409;FS=6.934;HRun=8;HaplotypeScore=76.8192;InbreedingCoeff=0.7639;MQ=84.76;MQ0=0;MQRankSum=-0.750;QD=15.25;ReadPosRankSum=-4.217;VQSLOD=0.3330;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:30:69.17:0,69,765	0/0:6,0:6:15.03:0,15,167	0/1:16,0:16:0.73:1,0,229	0/0:10,0:10:17.03:0,17,156	0/0:12,0:12:24:0,24,253	0/0:17,0:17:42.08:0,42,450	0/0:22,0:22:54.10:0,54,581	1/1:10,13:25:36.09:524,36,0	0/0:18,0:18:45.09:0,45,492	0/0:16,0:16:33.05:0,33,353	0/0:9,0:9:17.60:0,18,199	1/1:4,5:10:17.95:256,18,0	0/1:6,5:11:15.30:211,0,15	0/0:10,0:10:21.03:0,21,234	0/0:22,0:22:51:0,51,596	0/0:9,0:10:20.77:0,21,210	0/0:32,0:32:66.08:0,66,780	0/0:15,0:15:30.06:0,30,334	1/1:2,3:5:9.02:121,9,0	0/1:4,8:13:5.63:253,0,6	1/1:8,8:17:11.80:141,12,0	1/1:3,6:10:12.04:190,12,0	1/1:6,12:19:29.59:435,30,0	1/1:3,12:15:21.03:304,21,0	0/0:8,0:8:24.06:0,24,267	0/0:15,0:15:30.06:0,30,333	1/1:2,10:12:5.67:95,6,0	0/0:4,0:4:11.99:0,12,120
chr10	48405772	.	AG	A	3879.03	PASS	AB=0.889;AC=19;AF=0.339;AN=56;BaseQRankSum=2.191;DP=381;FS=3.269;HRun=2;HaplotypeScore=53.5920;InbreedingCoeff=0.8958;MQ=84.90;MQ0=0;MQRankSum=-1.287;QD=31.28;ReadPosRankSum=2.782;VQSLOD=3.3325;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:87.28:0,87,1276	0/0:6,0:6:18.06:0,18,266	0/0:15,0:15:42.09:0,42,553	0/0:11,0:11:31.28:0,31,386	1/1:0,13:13:33.11:428,33,0	0/0:16,0:16:48.15:0,48,697	0/0:18,0:18:51.17:0,51,763	0/0:24,0:24:66.21:0,66,962	0/0:15,0:15:45.14:0,45,654	1/1:0,11:11:33.11:429,33,0	1/1:0,12:12:20.71:272,21,0	0/0:11,0:11:24.05:0,24,315	0/1:7,1:8:17.88:18,0,247	1/1:1,10:11:27.09:350,27,0	0/0:21,0:21:60.19:0,60,879	0/0:12,0:12:33.11:0,33,493	1/1:3,28:31:81.26:1051,81,0	1/1:1,14:15:39.13:506,39,0	0/0:8,0:8:24.08:0,24,358	0/0:9,0:9:21.07:0,21,315	0/0:14,0:14:23.75:0,24,352	0/0:9,0:9:15.04:0,15,205	0/0:14,0:14:30.09:0,30,425	0/0:13,0:13:21.07:0,21,314	1/1:0,10:10:27.09:351,27,0	1/1:0,11:11:33.06:396,33,0	0/0:11,0:11:15.04:0,15,190	1/1:0,2:2:6.02:78,6,0
chr10	48406716	.	ACATGTGTGTGCATG	A	7169.87	PASS	AB=0.619;AC=15;AF=0.278;AN=54;BaseQRankSum=12.516;DP=810;FS=15.904;HRun=0;HaplotypeScore=324.8142;InbreedingCoeff=0.8894;MQ=57.43;MQ0=6;MQRankSum=-9.977;QD=44.81;ReadPosRankSum=1.216;VQSLOD=3.2357;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,117,6326	0/0:11,0:11:30.09:0,30,1717	0/0:29,0:19:30.05:0,30,1082	0/0:25,0:17:20.91:0,21,588	1/1:6,17:23:21.07:696,21,0	0/0:22,0:21:54.19:0,54,2837	0/0:29,0:29:66.17:0,66,3755	0/0:41,0:41:78.27:0,78,3304	0/0:30,0:30:75.23:0,75,3669	1/1:10,19:28:36.12:1190,36,0	1/1:3,9:12:9.03:290,9,0	0/0:32,0:32:78.27:0,78,3728	0/0:44,0:44:99:0,108,4961	1/1:3,22:25:36.12:1337,36,0	0/0:39,0:39:93.32:0,93,5062	0/0:41,0:41:96.32:0,96,4660	./.	0/1:5,8:13:85.22:234,0,85	0/0:25,0:25:57.17:0,57,2300	0/0:25,0:25:57.18:0,57,2597	0/0:68,0:68:99:0,170,8815	0/0:33,0:33:68.99:0,69,3564	0/0:30,0:30:72.25:0,72,3467	0/0:24,0:24:60.16:0,60,3209	1/1:5,14:19:27.09:972,27,0	1/1:6,20:26:54.19:1965,54,0	0/0:31,0:31:69.24:0,69,3540	1/1:5,8:13:12.04:485,12,0
chr10	48406895	.	A	ATT	6050.04	PASS	AB=0.626;AC=24;AF=0.429;AN=56;BaseQRankSum=-5.190;DP=588;FS=1.213;HRun=12;HaplotypeScore=85.6865;InbreedingCoeff=0.8054;MQ=61.04;MQ0=15;MQRankSum=-3.878;QD=19.71;ReadPosRankSum=-0.527;VQSLOD=4.2149;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:37:77.70:0,78,698	0/0:4,0:4:12.01:0,12,110	0/0:11,0:10:2.78:0,3,51	0/0:14,0:13:12.62:0,13,111	1/1:6,18:25:41.62:537,42,0	1/1:4,1:16:3.55:106,4,0	1/1:10,0:24:16.12:134,16,0	1/1:21,5:43:71.22:728,71,0	0/1:9,0:21:7.52:40,0,8	1/1:13,21:35:80.19:1042,80,0	1/1:9,12:21:29.34:659,29,0	0/0:2,0:22:49.40:0,49,215	0/0:4,0:20:38.27:0,38,164	1/1:6,13:20:36.07:465,36,0	0/0:22,0:23:53.43:0,53,463	0/0:25,0:24:41.90:0,42,374	1/1:8,24:28:68.72:934,69,0	1/1:3,13:16:40.38:549,40,0	0/0:21,0:21:47.11:0,47,439	0/0:18,0:19:50.77:0,51,456	0/0:10,0:12:20.45:0,20,162	0/0:1,0:12:30.18:0,30,130	0/0:2,0:19:49.39:0,49,215	0/0:1,0:12:30.18:0,30,131	1/1:5,1:20:30.07:328,30,0	0/1:6,10:16:19.19:384,0,19	0/0:24,0:24:38.80:0,39,386	1/1:2,3:7:14.02:144,14,0
chr10	48407032	.	TTGTG	T	2002.78	PASS	AB=0.962;AC=27;AF=0.482;AN=56;BaseQRankSum=3.893;DP=464;FS=1.288;HRun=0;HaplotypeScore=104.0690;InbreedingCoeff=0.3415;MQ=65.09;MQ0=8;MQRankSum=-4.474;QD=7.15;ReadPosRankSum=0.302;VQSLOD=2.5709;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:63.07:0,63,1013	0/0:3,0:3:9.02:0,9,124	0/0:27,0:17:31.94:0,32,424	0/0:26,0:14:9.43:0,9,292	1/1:20,0:19:3:26,3,0	0/0:15,0:14:30.06:0,30,642	0/0:19,0:19:33.11:0,33,578	1/1:25,0:23:28.60:424,29,0	0/0:17,0:17:39.13:0,39,748	0/1:13,0:12:11.60:45,0,12	1/1:16,0:16:3:26,3,0	1/1:6,5:11:15.05:225,15,0	1/1:13,3:16:9.03:137,9,0	0/1:17,0:17:15.95:44,0,16	0/0:12,0:13:38.90:0,39,789	0/0:16,0:16:39.13:0,39,641	0/1:21,0:21:18.16:41,0,18	1/1:11,0:11:3:26,3,0	0/1:14,8:19:65.45:226,0,65	0/0:15,0:15:4.24:0,4,27	1/1:18,0:15:17.60:264,18,0	1/1:8,0:8:2.75:25,3,0	1/1:11,4:15:11.66:171,12,0	1/1:9,2:11:12.04:181,12,0	0/1:18,0:18:11.96:67,0,12	0/1:23,0:23:19.04:19,0,43	0/1:15,0:15:10.30:242,0,10	0/0:3,0:3:2.99:0,3,24
chr10	48407034	.	G	GTGTGTGTGTGTA	1593.23	PASS	AB=0.859;AC=15;AF=0.268;AN=56;BaseQRankSum=1.058;DP=469;FS=8.018;HRun=0;HaplotypeScore=171.4253;InbreedingCoeff=0.5492;MQ=62.66;MQ0=8;MQRankSum=-1.618;QD=11.22;ReadPosRankSum=-1.905;VQSLOD=1.6667;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:31.98:0,32,1093	0/0:4,0:4:9.02:0,9,173	0/0:25,0:15:32.50:0,32,510	0/0:26,0:14:10.91:0,11,296	0/0:21,0:20:5.89:0,6,37	0/0:16,0:15:32.99:0,33,831	0/0:23,0:23:23.92:0,24,760	1/1:23,0:21:17.82:333,18,0	0/0:16,0:16:39.13:0,39,896	0/0:13,0:12:23.82:0,24,264	0/0:16,0:16:3.01:0,3,71	0/1:10,0:10:11.52:12,0,136	0/0:15,0:15:3.32:0,3,130	0/0:17,0:17:9.02:0,9,196	0/0:13,0:13:39.11:0,39,1141	0/0:16,0:16:38.86:0,39,1038	0/0:21,0:21:33.42:0,33,420	0/0:11,0:11:3.01:0,3,69	1/1:20,0:17:32.78:395,33,0	0/1:5,11:19:10.99:172,0,11	1/1:19,0:15:18.63:198,19,0	1/1:7,0:7:4.55:29,5,0	0/1:15,0:15:6.90:7,0,82	1/1:12,0:12:1.52:88,2,0	0/0:18,0:18:17.89:0,18,256	0/0:24,0:24:17.91:0,18,129	1/1:16,1:17:30.49:532,30,0	0/0:3,0:3:5.99:0,6,48
chr10	48407038	.	GTGTGTGTGTGTA	G	3787.17	PASS	AB=0.991;AC=31;AF=0.554;AN=56;BaseQRankSum=5.826;DP=468;FS=2.530;HRun=0;HaplotypeScore=151.0252;InbreedingCoeff=0.5508;MQ=62.05;MQ0=10;MQRankSum=-4.292;QD=13.57;ReadPosRankSum=0.805;VQSLOD=2.7494;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:30:66.56:0,67,2276	0/0:5,0:5:12.04:0,12,347	0/0:25,0:15:19.81:0,20,180	0/0:26,0:14:11.91:0,12,131	1/1:3,16:18:6.02:153,6,0	0/0:16,0:15:30.10:0,30,1448	0/0:21,0:21:42.51:0,43,1137	0/1:21,0:19:93.82:169,0,94	0/0:15,0:15:39.09:0,39,1533	1/1:12,1:12:28.59:399,29,0	1/1:3,12:15:3.01:108,3,0	1/1:10,0:10:15.05:423,15,0	1/1:14,0:14:8.76:257,9,0	1/1:5,13:18:6.49:216,6,0	0/0:13,0:13:36.11:0,36,1777	0/0:17,0:17:39.07:0,39,943	1/1:19,1:20:25.38:414,25,0	1/1:0,11:11:3.01:108,3,0	0/1:24,0:21:30.20:30,0,389	0/0:20,0:19:9.03:0,9,313	0/1:20,0:15:31.59:86,0,32	0/1:8,0:8:0:0,0,0	1/1:15,0:15:11.13:274,11,0	1/1:11,0:11:12.37:216,12,0	1/1:5,12:17:14.97:394,15,0	1/1:3,19:22:47.71:466,48,0	0/1:17,0:17:42.22:42,0,379	1/1:3,0:3:3.01:33,3,0
chr10	48407048	.	GTA	G	2259.95	PASS	AB=1.000;AC=39;AF=0.696;AN=56;BaseQRankSum=8.411;DP=476;FS=8.930;HRun=0;HaplotypeScore=97.9551;InbreedingCoeff=0.4967;MQ=50.80;MQ0=13;MQRankSum=-4.439;QD=6.33;ReadPosRankSum=-2.243;VQSLOD=1.8816;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:3.18:0,3,431	0/1:5,0:5:33.94:34,0,38	0/0:19,0:10:12.49:0,12,135	0/0:20,0:9:9.55:0,10,126	1/1:17,0:16:5.88:36,6,0	0/1:15,0:13:2.34:2,0,313	0/0:18,0:18:34.19:0,34,388	1/1:20,0:16:5.75:211,6,0	0/0:17,0:17:41.20:0,41,527	1/1:17,0:15:40.78:314,41,0	1/1:12,0:12:2.96:19,3,0	1/1:5,14:19:20.54:131,21,0	1/1:3,16:19:14.69:97,15,0	1/1:17,0:17:8.88:59,9,0	0/0:13,0:13:26.87:0,27,547	0/1:20,0:20:3.24:3,0,165	1/1:21,0:21:47.46:329,47,0	1/1:12,0:12:3.43:21,3,0	0/1:26,0:21:59.29:91,0,59	1/1:17,0:16:5.91:69,6,0	1/1:20,0:15:17.57:128,18,0	1/1:1,11:12:2.69:24,3,0	1/1:7,15:22:17.79:114,18,0	1/1:13,0:13:17.74:110,18,0	1/1:15,1:16:14.75:94,15,0	1/1:19,0:19:47.71:357,48,0	0/1:13,0:13:1.78:86,0,2	1/1:5,0:5:14.91:111,15,0
chr10	48407050	.	ATGTGTGTGTGTG	A	2850.32	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=7.535;DP=485;FS=1.446;HRun=0;HaplotypeScore=153.5288;InbreedingCoeff=0.4676;MQ=50.48;MQ0=15;MQRankSum=-4.417;QD=12.50;ReadPosRankSum=0.392;VQSLOD=2.3044;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:63.60:0,64,2270	0/0:4,0:4:12.04:0,12,346	0/0:18,0:10:3.01:0,3,47	0/0:22,0:8:3.01:0,3,61	1/1:17,0:16:6.02:119,6,0	0/0:15,0:13:33.11:0,33,1450	0/0:17,0:18:33.57:0,34,1104	0/0:19,0:14:14.91:0,15,239	0/0:17,0:18:36.58:0,37,1546	0/1:18,0:16:27.94:226,0,28	0/1:14,0:13:18.94:84,0,19	1/1:16,5:21:15.48:583,15,0	1/1:16,3:19:14.78:392,15,0	0/1:16,0:16:7.86:171,0,8	0/0:14,0:14:39.12:0,39,1827	0/0:11,0:20:24.05:0,24,762	0/1:22,0:22:35.39:185,0,35	0/1:13,0:13:21.10:81,0,21	0/0:29,0:24:41.96:0,42,714	0/0:16,0:15:9.92:0,10,377	0/0:19,0:14:4.26:0,4,76	1/1:13,0:13:3.34:50,3,0	1/1:18,4:23:20.83:431,21,0	1/1:12,2:14:12.03:260,12,0	1/1:14,0:14:11.48:306,11,0	1/1:19,0:19:3.57:111,4,0	0/0:14,0:14:18.48:0,18,504	1/1:5,0:5:5.29:41,5,0
chr10	48407771	.	CTGGG	C	6237.56	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=17.827;DP=799;FS=9.207;HRun=0;HaplotypeScore=162.6842;InbreedingCoeff=0.9906;MQ=86.19;MQ0=1;MQRankSum=-17.655;QD=36.06;ReadPosRankSum=-0.071;VQSLOD=4.6785;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,148,4231	0/0:14,0:14:42.14:0,42,1169	0/0:34,0:34:99:0,100,2558	0/0:35,0:35:99:0,105,2685	1/1:2,26:28:72.24:1006,72,0	0/0:42,0:42:99:0,126,3571	0/0:34,0:34:99:0,102,2893	0/0:31,0:31:93.30:0,93,2410	0/0:33,0:33:99:0,99,2868	1/1:6,10:16:47.95:585,48,0	1/1:4,9:13:32.37:403,32,0	0/0:39,0:39:99:0,114,3156	0/0:32,0:32:93.32:0,93,2654	1/1:1,20:20:57.19:810,57,0	0/0:42,0:42:99:0,126,3516	0/0:41,0:41:99:0,123,3353	1/1:3,25:28:62.09:885,62,0	1/1:2,10:12:27.08:379,27,0	0/0:14,0:14:42.12:0,42,1095	0/0:21,0:21:63.21:0,63,1726	0/0:60,0:60:99:0,181,4976	0/0:27,0:27:78.24:0,78,2148	0/0:18,0:18:51.17:0,51,1402	0/0:36,0:36:99:0,108,3021	1/1:2,16:18:51.78:695,52,0	1/1:4,30:34:93.33:1361,93,0	0/0:23,0:23:69.24:0,69,1999	1/1:1,2:3:9.02:114,9,0
chr10	48407777	.	GT	G	3479.16	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=18.627;DP=787;FS=14.757;HRun=1;HaplotypeScore=124.4301;InbreedingCoeff=0.9971;MQ=88.21;MQ0=2;MQRankSum=-17.460;QD=21.34;ReadPosRankSum=0.039;VQSLOD=2.4586;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,153,2410	0/0:13,0:13:39.13:0,39,623	0/0:31,0:31:93.29:0,93,1434	0/0:35,0:35:99:0,102,1507	1/1:1,26:27:71.42:522,71,0	0/0:39,0:39:99:0,114,1798	0/0:37,0:37:99:0,108,1692	0/0:29,0:29:87.29:0,87,1362	0/0:37,0:37:99:0,111,1693	1/1:1,10:11:32.91:276,33,0	1/1:1,9:10:26.63:182,27,0	0/0:39,0:39:99:0,111,1736	0/0:33,0:33:96.31:0,96,1508	1/1:3,21:23:65.71:544,66,0	0/0:44,0:44:99:0,132,2095	0/0:38,0:38:99:0,114,1804	1/1:2,25:27:65.66:506,66,0	1/1:1,11:11:26.93:227,27,0	0/0:14,0:14:42.13:0,42,640	0/0:23,0:23:69.21:0,69,1040	0/0:57,0:57:99:0,172,2731	0/0:25,0:25:72.25:0,72,1142	0/0:18,0:18:51.17:0,51,813	0/0:35,0:35:99:0,105,1655	1/1:0,16:16:47.75:359,48,0	1/1:1,30:31:89.69:713,90,0	0/0:26,0:26:78.25:0,78,1211	1/1:3,2:5:14.99:149,15,0
chr10	48408652	.	T	TTG	1763.24	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=2.065;DP=676;FS=4.966;HRun=0;HaplotypeScore=104.1891;InbreedingCoeff=0.8830;MQ=76.75;MQ0=1;MQRankSum=-0.860;QD=13.36;ReadPosRankSum=-2.562;VQSLOD=2.8304;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:58.96:0,59,1105	0/0:12,0:12:21.98:0,22,362	0/0:33,0:24:20.99:0,21,348	0/1:21,0:16:10.09:10,0,124	0/0:19,0:19:27.51:0,28,407	0/0:36,0:36:96.76:0,97,910	0/0:22,0:22:59.53:0,60,614	0/0:26,0:26:10.21:0,10,292	0/0:28,0:29:70.89:0,71,692	0/0:26,0:26:71.55:0,72,725	0/0:17,0:17:43.92:0,44,423	1/1:4,17:28:20.95:290,21,0	1/1:1,13:19:23.85:262,24,0	0/0:32,0:32:84.96:0,85,804	0/0:25,0:25:46.86:0,47,579	0/0:21,0:21:39.78:0,40,432	0/0:20,0:20:59.55:0,60,578	0/0:15,0:15:44.71:0,45,452	0/0:18,0:18:25.16:0,25,373	0/0:17,0:17:48.03:0,48,491	0/0:27,0:27:59.51:0,60,626	1/1:1,17:22:44.58:507,45,0	1/1:1,11:19:42.35:475,42,0	1/1:3,17:23:29.78:397,30,0	0/0:32,0:32:69.21:0,69,877	0/0:29,0:30:82.57:0,83,830	0/0:36,0:35:33.34:0,33,650	0/0:8,0:8:23.75:0,24,276
chr10	48410141	.	TCTCTCTCACACACACACACA	T	1956.64	PASS	AB=0.996;AC=17;AF=0.327;AN=52;BaseQRankSum=5.281;DP=341;FS=0.911;HRun=0;HaplotypeScore=138.8561;InbreedingCoeff=0.2323;MQ=30.54;MQ0=54;MQRankSum=-1.398;QD=12.79;ReadPosRankSum=2.466;VQSLOD=2.6007;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:22:27.56:0,28,1558	0/1:7,0:6:0.17:0,0,0	./.	./.	0/0:12,0:10:0.53:0,1,1	0/0:11,0:10:6.02:0,6,343	0/0:18,0:14:13.13:0,13,736	0/0:24,0:20:34.96:0,35,243	0/0:8,0:7:10.39:0,10,415	0/1:23,1:22:99:975,0,142	1/1:13,1:12:0.78:2,1,0	1/1:18,0:11:1.40:73,1,0	1/1:6,0:5:5.34:224,5,0	1/1:10,0:9:3.31:110,3,0	0/0:13,0:13:18.52:0,19,911	0/0:10,0:7:6.08:0,6,58	0/1:19,0:13:0.06:112,0,0	0/1:12,0:7:99:147,0,113	0/0:12,0:11:17.99:0,18,229	0/1:10,0:8:0.06:0,0,0	0/0:9,0:6:0:0,0,0	0/0:12,0:11:0:0,0,1	0/1:8,0:8:0.08:1,0,0	0/0:17,0:14:1.41:0,1,3	0/0:8,4:11:1.25:0,1,3	0/1:12,0:11:99:355,0,241	0/1:7,0:6:53.51:67,0,54	0/1:6,0:5:0.70:14,0,1
chr10	48410147	.	TCACACACACACACA	T	1969.23	PASS	AB=0.821;AC=27;AF=0.540;AN=50;BaseQRankSum=6.527;DP=335;FS=8.298;HRun=0;HaplotypeScore=117.5218;InbreedingCoeff=0.4401;MQ=32.81;MQ0=54;MQRankSum=-2.517;QD=11.25;ReadPosRankSum=0.439;VQSLOD=1.8622;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:21:30.57:0,31,1670	0/0:8,0:7:2.99:0,3,125	./.	./.	1/1:10,1:9:0.47:1,0,0	0/0:11,0:10:9.03:0,9,503	0/0:21,0:17:26.58:0,27,1397	0/0:21,0:17:23.69:0,24,131	0/0:9,0:8:10.80:0,11,403	1/1:16,9:24:29.80:948,30,0	1/1:8,3:9:0.94:3,1,0	1/1:11,0:9:1.40:97,1,0	1/1:3,0:4:6.02:225,6,0	1/1:5,4:9:4.37:112,4,0	0/0:13,0:13:17.65:0,18,881	0/0:10,0:7:2.77:0,3,124	1/1:16,5:14:2.72:116,3,0	0/1:7,5:9:99:171,0,111	0/0:11,0:11:14.98:0,15,169	1/1:7,0:8:0.47:1,0,0	0/1:10,0:7:0:0,0,0	./.	1/1:4,0:6:0.47:1,0,0	0/0:15,0:13:0.47:0,0,1	1/1:10,0:9:0.47:1,0,0	1/1:8,3:10:8.97:347,9,0	0/1:5,0:6:51.38:68,0,51	1/1:4,4:7:2.97:20,3,0
chr10	48411325	.	GA	G	19489.26	PASS	AB=0.730;AC=54;AF=0.964;AN=56;BaseQRankSum=-4.947;DP=663;FS=7.942;HRun=3;HaplotypeScore=87.2764;InbreedingCoeff=-0.0363;MQ=81.57;MQ0=0;MQRankSum=-4.267;QD=29.40;ReadPosRankSum=3.387;VQSLOD=4.1539;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,31:31:87.23:1061,87,0	1/1:0,8:8:18.06:223,18,0	0/1:10,9:18:8.75:294,0,9	0/1:18,7:25:69.36:123,0,69	1/1:0,13:13:24.03:280,24,0	1/1:0,22:22:63.16:763,63,0	1/1:1,42:43:99:1376,111,0	1/1:1,24:25:72.12:823,72,0	1/1:2,19:20:42.08:502,42,0	1/1:1,15:16:42.13:520,42,0	1/1:1,16:17:39.12:483,39,0	1/1:0,21:21:54.10:650,54,0	1/1:0,23:23:48.15:595,48,0	1/1:2,29:31:60.19:743,60,0	1/1:1,30:31:84.26:1041,84,0	1/1:2,22:24:57.11:687,57,0	1/1:0,30:30:84.26:1040,84,0	1/1:0,27:27:81.25:1003,81,0	1/1:0,18:18:51.07:565,51,0	1/1:0,16:16:33.04:409,33,0	1/1:3,62:65:99:2006,166,0	1/1:0,13:13:27.03:316,27,0	1/1:1,14:15:39.08:483,39,0	1/1:0,23:23:57.18:706,57,0	1/1:1,20:21:60.12:723,60,0	1/1:1,32:33:90.25:1089,90,0	1/1:0,26:26:69.17:837,69,0	1/1:0,6:6:12.04:149,12,0
chr10	48411368	.	TACACACAC	T	1218.72	PASS	AB=0.934;AC=13;AF=0.260;AN=50;BaseQRankSum=-2.560;DP=678;FS=12.510;HRun=0;HaplotypeScore=211.7339;InbreedingCoeff=0.5233;MQ=50.47;MQ0=21;MQRankSum=-0.559;QD=6.25;ReadPosRankSum=-2.662;VQSLOD=0.8746;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:36.12:0,36,1178	0/0:7,0:7:9.03:0,9,292	./.	./.	1/1:13,0:12:3.01:48,3,0	0/0:24,0:24:21.94:0,22,545	0/0:40,0:39:16.12:0,16,426	0/0:21,0:20:0:0,0,0	0/0:29,0:26:36.11:0,36,954	0/1:16,0:16:9.93:142,0,10	./.	0/0:23,0:24:27.52:0,28,367	0/0:17,0:18:28.61:0,29,333	1/1:35,3:40:23.71:421,24,0	0/0:42,0:42:48.47:0,48,1453	0/0:25,0:27:36.12:0,36,1199	0/1:28,3:32:22.70:325,0,23	0/1:29,1:31:7.02:207,0,7	0/0:18,0:18:9.88:0,10,86	0/0:16,0:16:4.56:0,5,44	0/0:68,0:66:35.29:0,35,326	0/0:11,0:11:6.02:0,6,143	0/0:12,0:13:6.02:0,6,110	0/0:25,0:31:38.77:0,39,521	1/1:18,3:21:6.02:81,6,0	1/1:30,0:27:5.95:58,6,0	0/0:22,0:24:8.06:0,8,55	1/1:10,0:8:11.89:93,12,0
chr10	48411418	.	C	CAG	4098.74	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=4.932;DP=707;FS=1.490;HRun=0;HaplotypeScore=129.4896;InbreedingCoeff=0.8971;MQ=66.26;MQ0=11;MQRankSum=-2.070;QD=15.07;ReadPosRankSum=-0.908;VQSLOD=3.5508;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:27.94:0,28,336	0/0:12,0:12:14.09:0,14,194	0/0:34,0:21:50.98:0,51,469	0/0:38,0:22:56.93:0,57,535	0/0:20,0:20:38.84:0,39,307	0/0:23,0:23:36.34:0,36,345	0/0:39,0:38:80.68:0,81,645	1/1:29,0:26:77.02:522,77,0	0/0:28,0:28:27.59:0,28,330	0/0:25,0:23:59.76:0,60,514	0/0:12,0:11:14.97:0,15,121	1/1:17,0:17:40.04:325,40,0	1/1:31,0:31:82.21:616,82,0	0/0:34,0:34:80.64:0,81,638	0/0:40,0:40:70.65:0,71,745	0/1:31,0:31:21.03:21,0,441	0/0:28,0:28:64.83:0,65,489	0/0:25,0:25:52.54:0,53,452	1/1:17,0:17:44.45:345,44,0	1/1:18,0:18:29.88:254,30,0	1/1:54,0:52:99:1033,128,0	1/1:6,15:20:5.61:66,6,0	1/1:11,0:11:20.96:171,21,0	1/1:33,0:32:86.77:623,87,0	0/0:15,0:15:23.97:0,24,200	0/0:27,0:26:68.73:0,69,578	1/1:10,0:10:16.61:123,17,0	0/0:5,0:5:14.84:0,15,103
chr10	48412099	.	A	AG	5380.67	PASS	AC=38;AF=0.704;AN=54;BaseQRankSum=-0.370;DP=247;FS=2.592;HRun=3;HaplotypeScore=50.0036;InbreedingCoeff=0.8860;MQ=88.39;MQ0=0;MQRankSum=-2.812;QD=34.71;ReadPosRankSum=2.344;VQSLOD=5.3422;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:27.08:0,27,323	./.	0/0:21,0:19:30.71:0,31,330	0/0:30,0:20:15.37:0,15,276	1/1:2,9:11:15.22:238,15,0	0/0:5,0:5:15.03:0,15,168	0/0:11,0:11:33.10:0,33,394	1/1:0,12:12:36.11:487,36,0	0/0:2,0:2:6.02:0,6,72	1/1:3,10:13:39.04:504,39,0	1/1:0,4:4:12.04:167,12,0	1/1:0,5:5:15.05:210,15,0	1/1:0,5:5:12.04:168,12,0	1/1:4,7:11:30.07:370,30,0	0/0:9,0:9:24.05:0,24,267	0/0:3,0:3:9.03:0,9,108	1/1:1,8:9:15.05:210,15,0	1/1:1,5:6:17.55:217,18,0	1/1:0,4:4:12.01:143,12,0	1/1:1,2:3:6.02:84,6,0	1/1:1,21:22:51.17:714,51,0	1/1:0,6:6:18.06:252,18,0	1/1:1,3:4:12.04:165,12,0	1/1:2,2:4:6.02:84,6,0	1/1:2,8:10:27.08:360,27,0	1/1:0,17:17:51.17:712,51,0	1/1:0,5:5:12.04:168,12,0	1/1:0,4:4:9.03:126,9,0
chr10	48412480	.	A	AACACACAC	17318.22	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=3.433;DP=696;FS=10.747;HRun=0;HaplotypeScore=177.7871;InbreedingCoeff=0.9863;MQ=62.13;MQ0=2;MQRankSum=-10.637;QD=41.73;ReadPosRankSum=-0.645;VQSLOD=3.9783;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:34:83.30:0,83,2053	0/0:7,0:7:18.06:0,18,473	0/0:32,0:27:36.56:0,37,791	0/0:31,0:29:47.98:0,48,946	1/1:11,15:27:21.07:862,21,0	0/0:24,0:24:54.19:0,54,1387	0/0:29,0:29:60.07:0,60,1172	0/0:33,0:32:48.43:0,48,1328	0/0:22,0:22:49.75:0,50,1374	1/1:9,17:29:63.09:2081,63,0	1/1:4,8:12:15.05:576,15,0	1/1:3,0:22:38.87:323,39,0	1/1:2,0:16:26.97:225,27,0	1/1:9,18:30:54.19:2142,54,0	0/0:37,0:37:99:0,99,2432	0/0:32,0:32:90.27:0,90,2199	1/1:8,20:33:51.18:1957,51,0	1/1:8,14:25:27.08:985,27,0	1/1:11,0:17:18.70:414,19,0	1/1:2,0:11:12.04:260,12,0	1/1:12,0:29:18.06:401,18,0	1/1:3,0:19:41.95:351,42,0	1/1:9,0:19:33.17:257,33,0	1/1:5,0:31:63.40:527,63,0	1/1:7,11:23:36.12:1440,36,0	1/1:17,23:41:90.10:3050,90,0	1/1:8,0:21:42.14:898,42,0	1/1:6,2:8:15.05:571,15,0
chr10	48412887	.	C	CATAA	2563.97	PASS	AC=38;AF=0.760;AN=50;BaseQRankSum=3.375;DP=287;FS=10.244;HRun=0;HaplotypeScore=54.4586;InbreedingCoeff=0.5637;MQ=67.88;MQ0=0;MQRankSum=-4.287;QD=12.09;ReadPosRankSum=-4.297;VQSLOD=0.1004;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:27.08:0,27,399	0/0:11,0:12:6.01:0,6,75	./.	./.	1/1:8,0:8:3.01:38,3,0	0/0:13,0:13:27.09:0,27,420	0/0:2,0:2:3.01:0,3,47	1/1:39,0:39:36.03:495,36,0	0/0:10,0:10:15.04:0,15,212	1/1:8,0:8:3.01:52,3,0	1/1:3,0:3:3.01:58,3,0	1/1:8,2:10:6.02:141,6,0	1/1:8,1:9:3.01:71,3,0	1/1:7,0:7:3.01:48,3,0	0/0:6,0:6:9.03:0,9,140	1/1:6,4:10:12.04:283,12,0	1/1:19,0:19:20.10:314,20,0	1/1:20,0:20:11.07:164,11,0	1/1:13,0:13:6.02:89,6,0	./.	1/1:10,0:10:3:25,3,0	1/1:6,1:7:3.01:71,3,0	1/1:3,3:6:9.03:212,9,0	1/1:3,3:5:6.02:141,6,0	1/1:16,0:16:15.05:259,15,0	1/1:6,0:6:3.01:52,3,0	1/1:7,0:8:6.02:104,6,0	1/1:7,0:7:6.02:105,6,0
chr10	48412921	.	T	TAAATAAATAAA	4323.29	PASS	AB=0.925;AC=22;AF=0.393;AN=56;BaseQRankSum=8.428;DP=303;FS=11.508;HRun=0;HaplotypeScore=87.8960;InbreedingCoeff=0.4086;MQ=60.06;MQ0=3;MQRankSum=-5.648;QD=21.51;ReadPosRankSum=0.819;VQSLOD=2.5502;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:45.14:0,45,1094	0/0:5,0:5:12.04:0,12,273	0/0:4,0:4:9.03:0,9,120	0/0:3,0:1:3.01:0,3,44	1/1:2,0:6:9.79:109,10,0	0/0:16,0:16:48.14:0,48,1203	0/0:6,0:6:15.05:0,15,278	0/1:40,0:40:99:384,0,787	0/0:8,0:8:18.05:0,18,479	1/1:0,0:7:8.33:150,8,0	1/1:1,0:6:7.71:86,8,0	0/0:7,0:7:10.78:0,11,113	0/0:3,0:3:6.91:0,7,90	1/1:1,0:6:9.56:176,10,0	0/0:8,0:8:21.05:0,21,463	0/0:7,0:7:7.63:0,8,73	0/1:5,0:29:26.31:682,0,26	1/1:4,0:21:18.95:613,19,0	0/1:25,0:20:99:192,0,587	0/1:5,0:5:99:214,0,114	0/0:10,0:10:18:0,18,227	0/0:5,0:5:9.77:0,10,113	0/1:4,0:4:37.90:38,0,40	0/0:5,0:4:7.79:0,8,92	1/1:3,1:17:24.08:1013,24,0	1/1:1,0:10:11.33:140,11,0	0/1:9,0:9:99:320,0,236	1/1:1,0:16:6.02:204,6,0
chr10	48414270	.	CA	C	2868.97	PASS	AB=0.903;AC=11;AF=0.196;AN=56;BaseQRankSum=9.111;DP=707;FS=1.157;HRun=10;HaplotypeScore=78.3002;InbreedingCoeff=0.8873;MQ=71.06;MQ0=1;MQRankSum=-0.316;QD=16.21;ReadPosRankSum=-0.933;VQSLOD=3.7853;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:37:83.86:0,84,872	0/0:12,0:12:27.99:0,28,290	0/0:34,2:29:20.98:0,21,399	0/0:23,0:19:20.65:0,21,293	0/0:31,1:32:63.19:0,63,890	0/0:26,0:26:57.15:0,57,630	0/0:14,2:16:13.05:0,13,372	1/1:9,37:46:74.81:876,75,0	0/0:20,0:21:53.94:0,54,558	0/0:33,0:33:81.22:0,81,895	0/0:21,0:21:63.15:0,63,685	0/0:12,1:13:13:0,13,351	0/0:24,1:25:72.18:0,72,788	0/0:20,0:20:51.22:0,51,532	0/0:21,0:22:56.99:0,57,611	0/0:27,0:27:55.43:0,55,836	0/0:27,0:28:78.03:0,78,835	0/1:25,3:28:6.35:6,0,612	1/1:4,16:19:47.95:407,48,0	1/1:4,26:30:43.08:591,43,0	1/1:1,24:25:65.99:573,66,0	0/0:14,2:16:13.04:0,13,365	0/0:18,0:18:48.13:0,48,531	0/0:30,0:30:78.21:0,78,863	0/0:24,2:28:16.17:0,16,573	0/0:31,0:31:73.07:0,73,791	1/1:6,22:28:68.94:592,69,0	0/0:14,0:15:38.91:0,39,401
chr10	48415088	.	C	CT	18417.42	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-6.171;DP=686;FS=11.194;HRun=1;HaplotypeScore=75.7545;InbreedingCoeff=0.9997;MQ=88.32;MQ0=0;MQRankSum=-5.422;QD=39.61;ReadPosRankSum=3.054;VQSLOD=4.9068;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,117,1451	0/0:14,0:14:42.14:0,42,543	0/0:29,0:29:77.99:0,78,915	0/0:17,0:18:49.34:0,49,643	1/1:0,23:23:69.23:1033,69,0	0/0:23,0:23:66.20:0,66,841	0/0:20,0:20:57.17:0,57,724	1/1:0,20:20:60.15:820,60,0	0/0:24,0:24:66.19:0,66,828	1/1:1,21:22:60.13:816,60,0	1/1:0,20:20:54.14:783,54,0	1/1:1,30:31:81.27:1213,81,0	1/1:0,18:18:48.16:719,48,0	1/1:1,32:33:93.32:1393,93,0	0/0:28,0:28:84.26:0,84,1076	0/0:25,0:25:72.23:0,72,934	1/1:0,24:24:57.19:854,57,0	1/1:1,22:23:66.22:989,66,0	1/1:1,19:20:57.10:767,57,0	1/1:0,28:28:75.25:1124,75,0	1/1:1,50:51:99:2157,144,0	1/1:1,17:18:39.13:584,39,0	1/1:1,28:29:72.24:1079,72,0	1/1:1,23:24:63.21:944,63,0	1/1:1,26:27:72.24:1079,72,0	1/1:1,21:22:63.21:940,63,0	1/1:0,23:23:51.17:764,51,0	1/1:0,9:9:24.08:359,24,0
chr10	48418079	.	G	GCTCTCTCTCT	7485.74	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-3.067;DP=639;FS=9.291;HRun=0;HaplotypeScore=192.3412;InbreedingCoeff=0.8674;MQ=71.27;MQ0=8;MQRankSum=-8.399;QD=37.62;ReadPosRankSum=-4.430;VQSLOD=2.6793;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:32:87.23:0,87,2041	0/0:8,0:8:24.07:0,24,631	0/0:33,0:16:0.58:0,1,53	0/0:46,0:25:1.40:0,1,93	1/1:12,18:31:18.06:359,18,0	0/0:23,0:23:60.13:0,60,1425	0/0:24,0:25:60.15:0,60,1349	0/0:29,0:29:35.53:0,36,632	0/0:19,0:19:51.10:0,51,1136	1/1:12,8:21:45.02:1430,45,0	1/1:7,7:15:8.93:279,9,0	0/0:7,0:25:45.02:0,45,493	0/0:1,0:23:50.83:0,51,497	1/1:8,12:21:12.04:608,12,0	0/0:33,0:34:87.25:0,87,2211	0/0:25,0:25:69.19:0,69,1716	1/1:5,9:18:6.02:243,6,0	1/1:6,15:21:15.05:700,15,0	0/0:11,0:11:30.08:0,30,656	0/0:14,0:14:36.11:0,36,833	0/0:19,0:19:37.29:0,37,739	0/0:6,0:22:8.65:0,9,266	0/0:3,0:6:6:0,6,122	0/0:2,0:20:39.07:0,39,446	1/1:9,16:25:21.07:1040,21,0	1/1:17,13:30:54.16:1960,54,0	0/0:25,0:25:57.14:0,57,1393	1/1:6,9:16:18.06:866,18,0
chr10	48418134	.	T	TTC	1120.55	PASS	AB=1.000;AC=4;AF=0.071;AN=56;BaseQRankSum=1.459;DP=579;FS=4.239;HRun=0;HaplotypeScore=123.8975;InbreedingCoeff=0.4497;MQ=81.67;MQ0=1;MQRankSum=-0.252;QD=16.98;ReadPosRankSum=-3.812;VQSLOD=2.8368;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:63.14:0,63,812	0/0:9,0:9:27.09:0,27,371	0/0:38,0:33:65.60:0,66,815	0/0:33,0:23:31.78:0,32,316	0/0:24,0:24:69.13:0,69,886	0/0:28,0:28:81.26:0,81,1096	0/0:14,0:14:36.11:0,36,479	1/1:5,26:31:78.19:1181,78,0	0/0:10,0:10:30.09:0,30,397	0/0:21,0:21:63.16:0,63,827	0/0:22,0:22:59.99:0,60,714	0/0:18,0:18:44.44:0,44,520	0/0:19,0:19:45.53:0,46,548	0/0:16,0:16:39.13:0,39,534	0/0:23,0:23:54.14:0,54,669	0/0:17,0:17:51.14:0,51,643	0/0:18,0:18:39.09:0,39,512	0/0:17,0:16:11.44:0,11,387	0/1:19,0:19:44.39:44,0,46	0/0:16,0:16:3.48:0,3,43	0/1:16,0:16:3.56:4,0,102	0/0:16,0:16:38.62:0,39,431	0/0:21,0:21:63.02:0,63,752	0/0:24,0:24:69.02:0,69,852	0/0:25,0:25:68.93:0,69,797	0/0:20,0:20:54.06:0,54,678	0/0:24,0:24:22.38:0,22,126	0/0:11,0:11:27:0,27,328
chr10	48418138	.	C	CT	1982.69	PASS	AB=1.000;AC=12;AF=0.214;AN=56;BaseQRankSum=7.739;DP=571;FS=2.508;HRun=8;HaplotypeScore=104.9771;InbreedingCoeff=0.7183;MQ=79.39;MQ0=1;MQRankSum=-1.010;QD=13.67;ReadPosRankSum=-2.332;VQSLOD=3.0990;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:63.02:0,63,576	0/0:10,0:10:30.02:0,30,274	0/0:36,0:31:39.37:0,39,482	0/0:27,0:19:6.07:0,6,87	0/0:25,0:25:72.04:0,72,658	0/0:27,0:27:78.01:0,78,704	0/0:13,0:13:36:0,36,324	1/1:33,0:33:10.45:131,10,0	0/0:12,0:12:30.01:0,30,274	0/0:21,0:21:59.99:0,60,541	0/0:22,0:22:44.96:0,45,403	0/1:18,0:18:39.72:40,0,104	0/0:19,0:19:15.41:0,15,118	0/0:15,0:15:42.02:0,42,384	0/0:19,0:19:45.01:0,45,407	0/0:18,0:18:42.01:0,42,384	0/0:18,0:18:38.96:0,39,347	0/0:17,0:16:2.78:0,3,209	1/1:3,15:19:48.06:513,48,0	1/1:0,17:17:39.11:448,39,0	1/1:3,14:18:20.57:381,21,0	0/1:15,0:15:39.22:39,0,94	0/0:21,0:21:25.09:0,25,160	0/0:26,0:26:11.35:0,11,182	0/0:24,0:24:48.01:0,48,439	0/0:22,0:22:48.01:0,48,439	1/1:7,18:25:54.15:610,54,0	0/0:9,0:9:20.95:0,21,183
chr10	48418268	.	AAAAAC	A	7880.39	PASS	AB=0.765;AC=18;AF=0.321;AN=56;BaseQRankSum=7.351;DP=547;FS=0.764;HRun=0;HaplotypeScore=121.0676;InbreedingCoeff=0.8535;MQ=66.54;MQ0=0;MQRankSum=-2.807;QD=39.40;ReadPosRankSum=3.475;VQSLOD=4.8330;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:87.30:0,87,2467	0/0:12,0:12:24.08:0,24,680	0/0:15,0:14:36.08:0,36,772	0/1:21,0:17:6.21:6,0,610	1/1:2,21:23:57.11:1025,57,0	0/0:23,0:23:66.22:0,66,1842	0/0:17,0:17:39.09:0,39,1018	0/0:26,0:26:66.22:0,66,1786	0/0:18,0:18:51.18:0,51,1500	1/1:2,21:23:60.13:1170,60,0	1/1:1,12:13:32.94:569,33,0	0/0:21,0:21:57.20:0,57,1700	0/0:16,0:16:42.14:0,42,1150	1/1:1,13:14:27.09:532,27,0	0/0:20,0:20:54.17:0,54,1399	0/0:13,0:13:33.10:0,33,901	1/1:3,20:23:54.19:1077,54,0	0/1:4,32:36:11.40:1368,0,11	0/0:23,0:23:54.18:0,54,1423	0/0:23,0:23:63.17:0,63,1757	0/0:12,0:12:27.09:0,27,803	0/0:16,0:16:39.13:0,39,1101	0/0:11,0:11:30.10:0,30,840	0/0:26,0:26:72.25:0,72,1961	1/1:2,13:15:30.10:598,30,0	1/1:2,24:26:63.22:1236,63,0	0/0:24,0:23:60.20:0,60,1591	1/1:0,6:6:15.05:299,15,0
chr10	48418328	.	C	CCAT	9453.47	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=0.200;DP=508;FS=9.259;HRun=0;HaplotypeScore=124.2040;InbreedingCoeff=0.9922;MQ=61.75;MQ0=0;MQRankSum=-13.045;QD=59.46;ReadPosRankSum=0.573;VQSLOD=6.3470;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:90.29:0,90,1637	0/0:6,0:6:18.06:0,18,334	0/0:8,0:8:24.08:0,24,438	0/0:11,0:11:30.07:0,30,509	0/0:13,0:13:29.93:0,30,558	0/0:23,0:23:66.21:0,66,1195	0/0:16,0:16:48.15:0,48,841	0/0:26,0:26:78.27:0,78,1439	0/0:21,0:21:60.19:0,60,1086	0/0:21,0:21:60.19:0,60,1095	0/0:9,0:9:27.09:0,27,503	1/1:7,20:27:78.26:1833,78,0	1/1:2,19:21:63.21:1502,63,0	0/0:27,0:27:69.21:0,69,1214	0/0:16,0:16:48.16:0,48,891	0/0:21,0:21:63.22:0,63,1167	0/0:25,0:25:75.26:0,75,1373	0/0:30,0:30:75.17:0,75,1281	1/1:3,19:23:63.22:1515,63,0	1/1:3,5:7:15.04:321,15,0	1/1:5,12:17:24.08:571,24,0	1/1:2,7:10:24.08:582,24,0	1/1:3,6:10:24.06:536,24,0	1/1:2,24:26:57.20:1357,57,0	0/0:21,0:21:57.17:0,57,1029	0/0:19,0:19:57.20:0,57,1063	1/1:1,15:17:51.18:1236,51,0	0/0:6,0:6:15.05:0,15,279
chr10	48418353	.	GC	G	4939.91	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=6.564;DP=536;FS=2.124;HRun=5;HaplotypeScore=116.7447;InbreedingCoeff=0.9863;MQ=73.32;MQ0=0;MQRankSum=-7.225;QD=24.45;ReadPosRankSum=-2.668;VQSLOD=2.6196;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:81.27:0,81,1106	0/0:6,0:6:15.05:0,15,205	0/0:20,0:20:57.15:0,57,731	0/0:14,0:14:39.12:0,39,504	0/0:13,0:13:27.07:0,27,351	0/0:20,0:20:60.20:0,60,821	0/0:26,0:26:78.26:0,78,1067	1/1:6,18:24:54.15:607,54,0	0/0:20,0:20:60.20:0,60,820	0/0:15,0:15:42.14:0,42,571	0/0:14,0:14:33.10:0,33,435	1/1:2,24:26:72.21:816,72,0	1/1:2,16:18:48.10:530,48,0	0/0:26,0:26:69.17:0,69,906	0/0:15,0:15:45.15:0,45,615	0/0:22,0:22:66.22:0,66,903	0/0:19,0:19:57.13:0,57,741	0/0:28,0:28:69.19:0,69,924	1/1:6,21:27:63.17:706,63,0	1/1:2,13:14:33.05:360,33,0	1/1:3,21:24:39.11:442,39,0	1/1:1,11:12:30.08:340,30,0	1/1:0,9:9:15.04:170,15,0	1/1:3,23:26:35.99:394,36,0	0/0:24,0:24:54.18:0,54,738	0/0:20,0:20:54.18:0,54,738	1/1:3,18:21:51.14:577,51,0	0/0:4,0:4:9.03:0,9,123
chr10	48418597	.	TG	T	1458.08	PASS	AB=0.943;AC=15;AF=0.268;AN=56;BaseQRankSum=2.000;DP=628;FS=0.000;HRun=2;HaplotypeScore=87.8012;InbreedingCoeff=-0.0267;MQ=49.83;MQ0=33;MQRankSum=-3.896;QD=5.83;ReadPosRankSum=-2.531;VQSLOD=-0.3657;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:43:99:0,104,1306	0/0:10,0:10:27.07:0,27,358	0/0:28,0:5:8.94:0,9,112	0/0:31,0:8:18.01:0,18,187	0/1:12,0:12:11.14:11,0,97	0/0:22,0:22:57.64:0,58,743	0/0:44,1:45:99:0,121,1579	1/1:2,15:14:38.58:433,39,0	0/0:29,0:29:81:0,81,1127	0/1:18,1:17:99:192,0,304	0/1:13,0:12:44.84:45,0,95	0/1:27,4:29:7.42:184,0,7	0/1:13,0:13:18.31:118,0,18	0/0:23,0:20:30.01:0,30,348	0/0:27,0:27:81.23:0,81,1125	0/0:22,0:22:58.62:0,59,784	0/1:26,4:26:99:156,0,258	0/1:15,0:15:69.43:69,0,168	0/1:16,1:16:35.90:36,0,265	0/0:13,1:14:8.05:0,8,86	0/0:50,2:47:37.18:0,37,508	0/0:12,0:11:3.74:0,4,8	1/1:14,1:14:3.36:58,3,0	0/1:31,1:29:5.27:16,0,5	0/0:15,0:14:6.95:0,7,82	0/1:28,1:27:99:273,0,514	0/1:5,2:7:26.26:26,0,62	0/0:3,0:2:4.56:0,5,44
chr10	48418598	.	G	GT	1916.23	PASS	AB=0.744;AC=17;AF=0.304;AN=56;BaseQRankSum=1.735;DP=619;FS=0.000;HRun=1;HaplotypeScore=86.2071;InbreedingCoeff=0.0044;MQ=49.99;MQ0=33;MQRankSum=-2.764;QD=7.34;ReadPosRankSum=-1.896;VQSLOD=-0.1961;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:43:99:0,108,1340	0/0:10,0:10:27.09:0,27,358	0/0:29,0:5:8.44:0,8,113	0/0:29,0:7:18.01:0,18,186	0/1:8,4:12:50.16:50,0,92	0/0:22,0:22:62.54:0,63,761	0/0:43,0:43:99:0,122,1528	1/1:16,0:13:38.58:424,39,0	0/0:30,0:30:81.21:0,81,1065	0/1:11,8:17:99:284,0,280	0/1:5,8:12:68.78:69,0,88	1/1:20,11:29:7.12:238,7,0	0/1:11,3:14:18.87:138,0,19	0/0:15,8:20:24.84:0,25,328	0/0:28,0:28:81.23:0,81,1074	0/0:21,0:21:60.13:0,60,774	0/1:20,8:24:99:153,0,255	0/1:7,8:15:99:134,0,142	0/1:12,2:13:67.90:68,0,233	0/0:11,2:13:2.10:0,2,74	0/0:48,2:46:37.07:0,37,508	0/0:6,6:11:3.74:0,4,9	1/1:9,5:14:2.12:57,2,0	0/1:22,11:30:0.86:56,0,1	0/1:7,7:14:18.31:18,0,74	0/1:15,14:27:99:349,0,446	0/1:6,1:7:29.42:42,0,29	0/0:2,1:2:2:0,2,39
chr10	48418881	.	GC	G	4337.09	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=15.054;DP=700;FS=0.734;HRun=5;HaplotypeScore=91.5910;InbreedingCoeff=0.9792;MQ=85.59;MQ0=0;MQRankSum=-2.991;QD=29.50;ReadPosRankSum=2.237;VQSLOD=5.1824;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,117,1582	0/0:7,0:7:18.06:0,18,246	0/0:26,0:26:66.14:0,66,833	0/0:24,0:23:66.17:0,66,814	0/0:15,0:15:33.11:0,33,451	0/0:19,0:19:57.19:0,57,779	0/0:32,0:32:93.30:0,93,1257	0/0:26,0:26:72.24:0,72,984	0/0:31,0:31:93.29:0,93,1242	0/0:22,0:22:60.19:0,60,793	0/0:6,0:6:9.03:0,9,123	0/0:48,0:48:99:0,135,1843	0/0:31,0:31:87.28:0,87,1173	0/0:32,0:32:93.28:0,93,1239	0/0:20,0:20:60.20:0,60,820	0/0:21,0:21:60.20:0,60,821	0/0:39,0:39:99:0,111,1503	0/0:19,0:19:54.18:0,54,738	1/1:4,22:26:66.17:732,66,0	1/1:1,14:15:33.08:367,33,0	1/1:1,80:81:99:2505,226,0	0/0:16,0:15:30.10:0,30,410	0/0:11,0:11:30.10:0,30,408	0/0:21,0:21:63.21:0,63,862	0/0:13,0:13:39.09:0,39,499	0/0:26,0:26:72.23:0,72,970	1/1:3,22:25:66.18:733,66,0	0/0:7,0:7:18.06:0,18,246
chr10	48419360	.	CT	C	4904.21	PASS	AB=0.927;AC=33;AF=0.589;AN=56;BaseQRankSum=11.948;DP=596;FS=6.289;HRun=10;HaplotypeScore=91.3598;InbreedingCoeff=0.6193;MQ=70.68;MQ0=1;MQRankSum=-0.646;QD=11.49;ReadPosRankSum=3.567;VQSLOD=4.3820;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:54.11:0,54,577	0/0:12,0:12:33.08:0,33,358	0/0:18,0:12:18:0,18,176	0/0:18,0:12:19.94:0,20,158	1/1:25,0:25:18.99:159,19,0	0/0:19,0:19:54.09:0,54,582	0/0:18,0:18:51.13:0,51,559	1/1:8,8:16:29.98:258,30,0	0/0:23,1:24:46.11:0,46,713	0/1:24,0:24:11.23:75,0,11	1/1:19,0:19:16.36:105,16,0	1/1:2,22:24:38.87:338,39,0	0/1:6,8:14:6.19:181,0,6	0/1:19,0:19:10.13:74,0,10	0/0:25,1:26:43.13:0,43,704	0/0:13,0:13:39.11:0,39,431	1/1:48,0:48:15.10:220,15,0	0/1:25,0:25:6.25:91,0,6	1/1:7,18:25:53.91:455,54,0	1/1:3,25:28:71.98:625,72,0	1/1:2,7:9:17.99:156,18,0	1/1:2,21:23:62.98:546,63,0	1/1:0,24:24:59.89:521,60,0	1/1:3,16:19:32.98:286,33,0	1/1:20,0:20:4.04:77,4,0	0/1:28,0:28:68.09:75,0,68	1/1:4,28:32:74.97:651,75,0	1/1:5,0:5:2.50:9,2,0
chr10	48419370	.	TA	T	5504.87	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=9.924;DP=597;FS=4.552;HRun=5;HaplotypeScore=93.8827;InbreedingCoeff=0.6714;MQ=68.09;MQ0=2;MQRankSum=0.721;QD=17.42;ReadPosRankSum=4.076;VQSLOD=4.3560;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:54.10:0,54,651	0/0:12,0:12:36.11:0,36,455	0/0:17,0:11:15.02:0,15,177	0/0:13,0:7:20.20:0,20,179	1/1:2,27:29:74.98:793,75,0	0/0:21,0:21:60.17:0,60,740	0/0:19,0:19:57.17:0,57,714	0/1:18,0:18:2.40:2,0,149	0/0:27,0:27:71.54:0,72,861	1/1:2,19:21:60.14:652,60,0	1/1:0,18:20:53.34:543,53,0	0/0:26,0:26:15.17:0,15,110	0/0:13,0:13:12.91:0,13,138	1/1:2,15:17:42.12:470,42,0	0/0:24,0:24:70.10:0,70,885	0/0:17,0:17:44.29:0,44,576	1/1:3,44:47:96.27:1080,96,0	1/1:3,24:27:41.45:561,41,0	0/0:20,0:20:4.38:0,4,66	0/1:27,0:27:2.44:2,0,57	0/1:7,0:7:0.12:0,0,0	0/1:22,0:22:7.49:7,0,23	0/1:27,0:27:4.26:4,0,65	0/0:17,0:17:3.81:0,4,23	1/1:7,13:20:53.82:581,54,0	1/1:3,24:27:72.07:773,72,0	0/0:36,0:36:5.61:0,6,168	1/1:0,7:7:3.01:34,3,0
chr10	48419375	.	AC	A	1100.21	PASS	AB=0.985;AC=15;AF=0.268;AN=56;BaseQRankSum=12.662;DP=584;FS=2.470;HRun=1;HaplotypeScore=105.0437;InbreedingCoeff=0.7763;MQ=68.13;MQ0=2;MQRankSum=1.380;QD=5.24;ReadPosRankSum=4.511;VQSLOD=0.8627;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:57.13:0,57,792	0/0:12,0:12:36.12:0,36,550	0/0:17,0:12:1.16:0,1,159	0/0:11,0:6:15.87:0,16,134	0/1:29,0:29:0.45:154,0,0	0/0:21,0:21:63.20:0,63,938	0/0:20,0:20:60.17:0,60,868	0/0:17,0:17:49.83:0,50,483	0/0:25,0:25:75.20:0,75,1065	1/1:19,1:20:37.06:154,37,0	1/1:20,0:20:23.39:123,23,0	0/0:21,0:21:54:0,54,532	0/0:15,0:15:44.94:0,45,460	1/1:15,1:16:37.23:188,37,0	0/0:25,0:25:75.22:0,75,1104	0/0:17,0:17:51.12:0,51,749	1/1:45,0:45:60.83:282,61,0	1/1:25,1:26:28.83:150,29,0	0/0:18,0:18:53.51:0,54,516	0/0:30,0:30:89.61:0,90,759	0/0:6,0:6:17.96:0,18,148	0/0:24,0:24:70.42:0,70,559	0/0:26,0:26:73.93:0,74,643	0/0:16,0:16:38.92:0,39,334	0/1:20,1:21:4.26:105,0,4	0/1:26,0:26:0.21:119,0,0	0/0:34,0:34:98.28:0,98,902	1/1:7,0:7:2.50:9,2,0
chr10	48419381	.	TTA	T	705.21	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=2.308;DP=583;FS=0.845;HRun=0;HaplotypeScore=117.1918;InbreedingCoeff=0.5472;MQ=68.16;MQ0=1;MQRankSum=-3.353;QD=25.19;ReadPosRankSum=-3.425;VQSLOD=3.5776;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:54.18:0,54,1043	0/0:13,0:13:39.13:0,39,747	0/0:11,0:9:10.33:0,10,111	0/1:11,0:6:30.60:31,0,77	0/0:27,0:27:81.28:0,81,1563	0/0:20,0:20:57.18:0,57,1065	0/0:18,0:18:54.19:0,54,1031	1/1:0,17:17:51.17:780,51,0	0/0:25,0:25:75.24:0,75,1401	0/0:19,0:19:51.16:0,51,946	0/0:20,0:20:57.20:0,57,1088	0/0:21,0:21:54.19:0,54,1031	0/0:17,0:17:51.17:0,51,959	0/0:18,0:18:51.15:0,51,924	0/0:26,0:26:78.27:0,78,1493	0/0:19,0:19:54.18:0,54,1042	0/0:42,0:42:99:0,102,1933	0/0:25,0:25:51.09:0,51,985	0/0:22,0:22:63.19:0,63,1181	0/0:35,0:35:99:0,102,1944	0/0:4,0:4:12.04:0,12,232	0/0:23,0:23:66.23:0,66,1262	0/0:27,0:27:78.27:0,78,1506	0/0:17,0:17:45.15:0,45,856	0/0:23,0:23:69.24:0,69,1319	0/0:26,0:26:78.27:0,78,1506	0/0:31,0:31:90.31:0,90,1735	0/0:7,0:7:3.01:0,3,58
chr10	48421342	.	TCAGTTC	T	4830.64	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=11.687;DP=368;FS=5.762;HRun=0;HaplotypeScore=99.0651;InbreedingCoeff=0.9343;MQ=86.03;MQ0=0;MQRankSum=-11.427;QD=59.64;ReadPosRankSum=2.213;VQSLOD=4.9988;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:66.23:0,66,2484	0/0:6,0:6:18.01:0,18,496	0/0:13,0:13:39.13:0,39,1261	0/0:16,0:16:46.97:0,47,1589	1/1:0,2:2:2.69:76,3,0	0/0:10,0:10:30.10:0,30,1129	0/0:29,0:29:87.30:0,87,3249	0/0:14,0:14:42.14:0,42,1423	0/0:11,0:11:33.11:0,33,1172	1/1:0,13:13:39.07:887,39,0	1/1:0,8:8:5.68:152,6,0	0/0:16,0:16:48.16:0,48,1616	0/0:10,0:10:30.10:0,30,1124	1/1:0,9:9:24.08:612,24,0	0/0:9,0:9:27.09:0,27,1016	0/0:6,0:6:18.06:0,18,678	1/1:0,10:10:24.08:613,24,0	1/1:0,17:17:36.12:921,36,0	0/0:17,0:17:51.18:0,51,1897	0/0:8,0:8:21.07:0,21,741	0/0:51,0:51:99:0,154,5511	0/0:11,0:11:30.10:0,30,1070	0/0:4,0:4:9.03:0,9,339	0/0:22,0:22:66.23:0,66,2458	1/1:1,9:10:27.09:685,27,0	1/1:0,8:8:24.08:577,24,0	0/0:12,0:12:36.12:0,36,1278	1/1:0,4:4:12.04:307,12,0
chr10	48424832	.	CATACAT	C	1713.72	PASS	AB=0.976;AC=13;AF=0.232;AN=56;BaseQRankSum=6.935;DP=650;FS=0.499;HRun=0;HaplotypeScore=194.1961;InbreedingCoeff=0.4369;MQ=46.70;MQ0=12;MQRankSum=-9.478;QD=8.16;ReadPosRankSum=-3.957;VQSLOD=1.8729;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:37:33.34:0,33,1752	0/0:10,0:10:17.65:0,18,440	0/0:20,0:6:17.90:0,18,156	0/0:21,0:8:19.30:0,19,234	0/0:33,0:33:32.56:0,33,707	0/0:25,0:26:6.44:0,6,1350	0/0:25,0:25:66.19:0,66,1167	0/1:35,0:31:99:396,0,544	0/1:16,1:17:21.41:21,0,1272	0/1:33,0:33:56.59:57,0,1211	0/0:26,0:26:23.73:0,24,531	0/0:32,0:31:78.20:0,78,1686	0/0:18,0:17:21.06:0,21,427	0/0:27,0:25:2.18:0,2,159	0/0:27,0:27:56.82:0,57,1412	0/0:26,0:26:54.15:0,54,1406	0/1:13,0:13:1.61:2,0,80	0/0:12,0:12:7.23:0,7,446	1/1:20,5:22:38.76:585,39,0	1/1:8,5:13:11.90:148,12,0	1/1:20,4:24:5.84:89,6,0	0/0:14,0:12:21.04:0,21,370	0/0:30,0:26:48.07:0,48,727	0/0:26,0:26:38.52:0,39,605	0/0:21,0:21:42.12:0,42,943	0/1:29,0:26:14.61:15,0,774	1/1:13,5:19:33.44:567,33,0	0/0:8,0:8:12.60:0,13,187
chr10	48424836	.	CAT	C	1110.39	PASS	AB=0.945;AC=13;AF=0.232;AN=56;BaseQRankSum=7.724;DP=643;FS=0.000;HRun=0;HaplotypeScore=163.5582;InbreedingCoeff=0.3709;MQ=45.54;MQ0=15;MQRankSum=-9.126;QD=5.14;ReadPosRankSum=-2.699;VQSLOD=2.5088;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:35:44.02:0,44,920	0/0:10,0:10:5.16:0,5,211	0/0:20,0:5:14.96:0,15,145	0/0:20,0:6:15.89:0,16,167	0/0:33,0:33:26.72:0,27,324	0/1:29,0:28:23.24:23,0,620	0/0:23,0:22:59.83:0,60,656	0/1:20,12:28:99:414,0,167	0/0:24,0:24:31.31:0,31,706	0/1:33,0:33:90.86:91,0,473	0/0:24,0:24:20.75:0,21,255	0/0:30,0:29:68.72:0,69,911	0/0:20,0:19:14.88:0,15,222	0/0:26,0:24:4.36:0,4,108	0/0:23,0:23:37.12:0,37,697	0/0:24,0:24:51.13:0,51,788	0/1:13,0:12:4.68:5,0,36	0/0:13,0:13:3.61:0,4,173	1/1:20,5:21:38.68:331,39,0	1/1:12,0:12:8.54:50,9,0	1/1:21,2:23:1.42:19,1,0	0/0:15,0:13:23.60:0,24,246	0/0:31,0:27:39.02:0,39,448	0/0:25,0:25:38.55:0,39,434	0/0:20,0:20:39.05:0,39,457	0/1:29,0:26:31.72:32,0,321	1/1:18,2:18:32.86:308,33,0	0/0:9,0:9:6.45:0,6,83
chr10	48424838	.	TAC	T	1000.98	PASS	AB=0.870;AC=13;AF=0.232;AN=56;BaseQRankSum=7.269;DP=640;FS=1.827;HRun=0;HaplotypeScore=164.9158;InbreedingCoeff=0.2268;MQ=44.97;MQ0=15;MQRankSum=-10.584;QD=4.74;ReadPosRankSum=-2.387;VQSLOD=3.0442;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:34:48.05:0,48,631	0/0:10,0:10:8.31:0,8,145	0/0:20,0:5:15.05:0,15,206	0/0:19,0:6:12.04:0,12,177	0/0:20,12:32:15.04:0,15,108	0/0:28,0:27:28.83:0,29,438	0/0:23,0:22:30.10:0,30,457	0/1:34,0:30:37.43:179,0,37	0/0:25,0:25:44.37:0,44,618	0/1:18,13:31:90.93:366,0,91	0/0:14,10:24:11.62:0,12,85	0/0:31,0:30:56.30:0,56,662	0/0:18,0:17:20.55:0,21,250	1/1:17,8:23:2.77:9,3,0	0/0:26,0:26:34.62:0,35,535	0/0:25,0:25:45.62:0,46,686	1/1:9,3:11:5.81:46,6,0	0/1:11,2:13:43.82:44,0,45	0/1:27,0:23:21.44:114,0,21	0/1:12,0:12:7.41:11,0,7	0/0:23,0:23:0.47:0,0,1	0/0:15,0:13:18.06:0,18,258	0/0:30,0:26:30.03:0,30,422	0/0:24,0:24:32.17:0,32,486	0/0:16,4:20:21.19:0,21,141	0/1:19,10:26:50.32:249,0,50	1/1:21,0:19:21.33:122,21,0	0/1:5,2:7:16.14:16,0,26
chr10	48424854	.	CAT	C	2210.91	PASS	AB=0.978;AC=28;AF=0.500;AN=56;BaseQRankSum=10.337;DP=621;FS=0.000;HRun=0;HaplotypeScore=171.0855;InbreedingCoeff=0.3056;MQ=43.32;MQ0=14;MQRankSum=-4.895;QD=5.02;ReadPosRankSum=-2.861;VQSLOD=2.7680;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:36,0:33:32.73:33,0,356	0/0:9,0:9:9.49:0,9,151	0/0:9,0:5:14.98:0,15,199	0/0:9,0:4:12.04:0,12,217	1/1:32,0:32:6.67:33,7,0	0/1:26,0:25:47.69:48,0,294	0/0:20,0:18:18.97:0,19,490	0/1:28,0:27:41.18:41,0,57	0/1:24,0:24:8.62:9,0,429	1/1:31,3:33:84.98:739,85,0	1/1:19,4:23:4.62:12,5,0	0/1:33,0:32:28.18:28,0,645	0/0:18,0:16:25.29:0,25,330	1/1:23,2:23:5.65:47,6,0	0/0:30,0:30:38.14:0,38,537	0/1:31,0:31:9.76:10,0,547	1/1:4,4:7:8.67:48,9,0	1/1:14,0:14:7.67:111,8,0	1/1:24,5:26:19.17:346,19,0	0/1:12,2:14:6.27:27,0,6	0/0:12,7:19:0.42:0,0,1	0/0:16,0:14:1.83:0,2,263	0/0:27,0:23:7.89:0,8,442	0/0:23,1:24:13.49:0,13,587	0/1:18,1:19:17.14:56,0,17	1/1:27,4:28:68.27:572,68,0	1/1:17,2:17:20.98:174,21,0	1/1:13,1:14:9.34:65,9,0
chr10	48424860	.	CACACAG	C	2461.77	PASS	AB=0.879;AC=18;AF=0.321;AN=56;BaseQRankSum=8.182;DP=598;FS=11.505;HRun=0;HaplotypeScore=192.5589;InbreedingCoeff=0.4247;MQ=42.48;MQ0=16;MQRankSum=-6.634;QD=9.85;ReadPosRankSum=0.853;VQSLOD=1.8270;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:27:38.90:0,39,609	0/0:8,0:8:15.05:0,15,237	0/0:9,0:5:15.05:0,15,235	0/0:9,0:4:12.04:0,12,247	1/1:17,6:30:7.88:28,8,0	0/0:23,0:22:32.15:0,32,476	0/0:19,0:17:35.48:0,35,586	0/0:32,0:30:69.23:0,69,618	0/0:20,0:20:41.48:0,41,721	1/1:27,5:33:34.57:819,35,0	1/1:15,5:23:7.57:30,8,0	0/0:32,0:31:65.20:0,65,1407	0/0:18,0:16:33.10:0,33,682	1/1:17,5:22:2.25:9,2,0	0/0:30,0:30:38.86:0,39,622	0/0:30,0:30:57.11:0,57,1043	1/1:8,2:9:6:82,6,0	1/1:13,1:14:1.12:155,1,0	0/1:24,0:21:99:340,0,119	0/1:10,0:10:3.12:3,0,17	0/0:19,0:19:0.39:0,0,1	0/0:17,0:15:26.92:0,27,601	0/0:29,0:24:14.65:0,15,745	0/0:23,0:23:38.20:0,38,1123	0/1:13,3:18:0.82:53,0,1	0/1:21,7:26:43.43:789,0,43	0/1:17,0:15:54.07:104,0,54	0/1:10,7:17:28.35:218,0,28
chr10	48424881	.	A	AGAGA	1437.63	PASS	AB=1.000;AC=21;AF=0.457;AN=46;BaseQRankSum=-2.338;DP=590;FS=0.000;HRun=0;HaplotypeScore=176.1353;InbreedingCoeff=0.6060;MQ=43.36;MQ0=17;MQRankSum=1.532;QD=5.66;ReadPosRankSum=-1.287;VQSLOD=2.1392;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:27:5.23:99,5,0	1/1:7,0:7:3.01:71,3,0	./.	./.	0/1:23,0:23:0:0,0,0	1/1:24,0:23:12.02:209,12,0	1/1:23,0:21:6.01:95,6,0	0/0:34,0:32:0.77:0,1,103	1/1:21,0:21:27.09:494,27,0	0/0:30,0:29:26.46:0,26,228	./.	0/0:30,0:29:35.90:0,36,488	0/0:17,0:15:15.05:0,15,217	0/0:24,0:23:2.92:0,3,22	1/1:18,13:32:6:89,6,0	0/1:31,0:31:64.95:286,0,65	0/1:8,0:7:0.80:1,0,29	0/0:15,0:14:5.52:0,6,49	1/1:18,0:15:17.43:153,17,0	1/1:16,0:15:1.82:5,2,0	./.	0/0:17,0:15:20.99:0,21,303	0/0:28,0:23:11.86:0,12,170	0/0:23,0:23:21.06:0,21,300	./.	0/0:32,0:30:27.24:0,27,213	1/1:21,0:20:12.38:97,12,0	0/0:20,0:20:20.23:0,20,148
chr10	48424901	.	A	ATT	6623.45	PASS	AB=0.638;AC=26;AF=0.464;AN=56;BaseQRankSum=10.319;DP=560;FS=15.288;HRun=0;HaplotypeScore=144.9169;InbreedingCoeff=0.8464;MQ=48.28;MQ0=15;MQRankSum=-8.043;QD=23.74;ReadPosRankSum=-4.644;VQSLOD=3.4676;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:23:39.04:0,39,469	0/0:9,0:9:15:0,15,178	0/0:11,0:8:24.08:0,24,364	0/0:11,0:9:27.09:0,27,402	1/1:24,0:24:45.63:583,46,0	0/0:28,0:27:41.44:0,41,562	0/0:23,0:22:41.46:0,41,587	1/1:23,8:28:45.56:582,46,0	0/0:21,0:21:45.99:0,46,535	1/1:28,0:27:74.62:921,75,0	1/1:14,0:14:25.84:318,26,0	0/0:25,0:25:28.94:0,29,697	0/0:19,0:17:33.10:0,33,484	1/1:20,0:20:48.97:610,49,0	0/0:29,0:29:23.92:0,24,343	0/0:31,0:31:53.82:0,54,622	1/1:8,0:8:17.42:206,17,0	1/1:14,0:13:24.65:334,25,0	0/1:9,2:21:7.82:661,0,8	1/1:5,10:14:22.55:222,23,0	1/1:4,6:11:5.71:72,6,0	0/0:11,0:11:27.01:0,27,384	0/0:15,0:14:33.50:0,34,463	0/0:24,0:24:64.30:0,64,895	1/1:17,0:17:40.37:560,40,0	1/1:26,0:26:71.78:838,72,0	0/1:12,12:23:22.53:73,0,23	1/1:21,0:21:56.62:642,57,0
chr10	48426111	.	GA	G	1199.70	PASS	AB=0.807;AC=15;AF=0.268;AN=56;BaseQRankSum=4.566;DP=486;FS=0.458;HRun=14;HaplotypeScore=125.0610;InbreedingCoeff=0.4279;MQ=81.31;MQ0=0;MQRankSum=-6.550;QD=6.89;ReadPosRankSum=2.039;VQSLOD=2.4552;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,1:37:83.87:0,84,717	0/0:8,0:9:21.01:0,21,190	0/0:26,0:23:17.83:0,18,157	0/0:20,0:15:0.22:0,0,24	0/1:15,2:19:14.17:14,0,42	0/0:10,0:10:24.03:0,24,223	0/0:16,1:18:38.80:0,39,328	0/0:25,1:27:22.74:0,23,338	0/1:10,2:12:20.09:20,0,118	0/1:13,11:25:12.15:209,0,12	1/1:4,8:14:24.60:154,25,0	0/0:16,0:16:38.80:0,39,341	0/0:8,1:10:3.75:0,4,158	1/1:6,9:17:3.57:162,4,0	0/0:15,1:18:18.13:0,18,283	0/0:9,1:10:2.66:0,3,165	1/1:9,12:22:12.77:224,13,0	1/1:12,9:22:11.73:205,12,0	0/0:9,0:18:46.77:0,47,298	0/0:11,0:16:31.58:0,32,194	0/0:8,0:11:20.58:0,21,144	0/0:14,1:16:12.31:0,12,234	0/0:9,1:11:22.10:0,22,181	0/0:23,0:24:44.89:0,45,398	1/1:9,9:18:26.60:185,27,0	0/1:10,9:19:17.02:168,0,17	0/0:10,0:15:29.06:0,29,176	0/1:6,0:6:13.73:34,0,14
chr10	48427009	.	AT	A	576.46	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.102;DP=621;FS=1.985;HRun=1;HaplotypeScore=60.1306;InbreedingCoeff=0.9993;MQ=68.66;MQ0=1;MQRankSum=-0.134;QD=33.91;ReadPosRankSum=1.021;VQSLOD=3.4720;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,102,1630	0/0:12,0:12:36.12:0,36,569	0/0:23,0:23:57.45:0,57,998	0/0:25,0:25:55.66:0,56,988	0/0:19,0:19:57.19:0,57,911	0/0:17,0:17:51.17:0,51,815	0/0:22,0:22:66.23:0,66,1055	0/0:25,0:25:75.26:0,75,1199	0/0:20,0:20:60.20:0,60,956	0/0:22,0:22:66.18:0,66,1013	0/0:10,0:10:30.10:0,30,478	1/1:0,17:17:48.16:671,48,0	0/0:26,0:26:78.23:0,78,1194	0/0:18,0:18:54.18:0,54,858	0/0:23,0:23:69.24:0,69,1101	0/0:32,0:32:96.33:0,96,1532	0/0:21,0:21:63.21:0,63,1002	0/0:25,0:25:75.24:0,75,1175	0/0:20,0:20:60.20:0,60,953	0/0:17,0:17:51.16:0,51,790	0/0:42,0:42:99:0,123,1919	0/0:21,0:21:63.20:0,63,983	0/0:20,0:20:57.18:0,57,886	0/0:25,0:25:72.25:0,72,1151	0/0:16,0:16:48.16:0,48,766	0/0:22,0:22:66.23:0,66,1056	0/0:22,0:22:66.20:0,66,1027	0/0:20,0:20:60.19:0,60,936
chr10	48428877	.	GC	G	743.67	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.145;DP=657;FS=0.000;HRun=5;HaplotypeScore=65.8050;InbreedingCoeff=0.9964;MQ=94.09;MQ0=0;MQRankSum=-2.141;QD=24.79;ReadPosRankSum=-3.019;VQSLOD=1.6933;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,105,1384	0/0:10,0:10:27.09:0,27,368	0/0:22,0:22:48.11:0,48,603	0/0:37,0:37:92.81:0,93,1143	0/0:18,0:18:54.14:0,54,689	0/0:15,0:15:45.15:0,45,615	0/0:26,0:26:75.24:0,75,1010	1/1:4,26:30:75.19:839,75,0	0/0:21,0:21:63.21:0,63,850	0/0:12,0:12:30.10:0,30,410	0/0:11,0:11:27.09:0,27,368	0/0:31,0:31:87.29:0,87,1189	0/0:32,0:32:93.29:0,93,1251	0/0:18,0:18:48.14:0,48,639	0/0:30,0:30:87.28:0,87,1175	0/0:25,0:25:72.24:0,72,984	0/0:37,0:36:99:0,108,1476	0/0:23,0:23:66.21:0,66,886	0/0:23,0:23:63.20:0,63,843	0/0:19,0:19:54.15:0,54,705	0/0:32,0:32:87.27:0,87,1185	0/0:9,0:9:27.08:0,27,353	0/0:17,0:17:51.17:0,51,686	0/0:38,0:38:99:0,111,1500	0/0:22,0:22:63.20:0,63,846	0/0:22,0:22:60.19:0,60,804	0/0:23,0:23:66.22:0,66,900	0/0:14,0:14:42.11:0,42,542
chr10	48430299	.	A	AG	845.09	PASS	AB=0.823;AC=10;AF=0.179;AN=56;BaseQRankSum=-2.810;DP=523;FS=12.796;HRun=0;HaplotypeScore=104.6129;InbreedingCoeff=0.5652;MQ=48.27;MQ0=23;MQRankSum=4.893;QD=5.49;ReadPosRankSum=3.397;VQSLOD=2.4058;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:70.08:0,70,585	0/0:5,0:5:11.93:0,12,92	0/1:31,0:9:5.26:5,0,28	0/1:25,0:9:11.84:12,0,64	0/0:17,0:15:32.96:0,33,173	0/0:24,0:23:59.11:0,59,554	0/0:19,0:19:51.65:0,52,462	0/0:22,0:22:53.65:0,54,358	0/0:11,0:11:32.63:0,33,254	0/0:28,0:27:72.73:0,73,511	0/0:17,0:16:31.05:0,31,182	1/1:3,10:14:5.39:82,5,0	0/1:4,19:25:1.87:112,0,2	0/0:11,0:11:29.67:0,30,193	0/0:12,0:12:26.40:0,26,244	0/0:16,0:16:36.93:0,37,244	0/0:21,0:19:44.85:0,45,263	0/0:17,0:15:25.24:0,25,153	0/0:15,0:14:37.55:0,38,263	0/0:19,0:18:51.99:0,52,401	0/0:11,0:10:26.74:0,27,185	1/1:2,18:20:38.35:329,38,0	1/1:3,14:18:16.19:214,16,0	0/1:14,7:21:11.66:243,0,12	0/0:19,0:18:41.10:0,41,288	0/0:20,0:20:51.35:0,51,368	0/0:19,0:18:50.16:0,50,399	0/0:18,0:18:38.51:0,39,252
chr10	48431711	.	A	AAAC	3503.24	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-8.946;DP=740;FS=8.496;HRun=0;HaplotypeScore=105.8359;InbreedingCoeff=0.9944;MQ=65.45;MQ0=5;MQRankSum=1.850;QD=32.74;ReadPosRankSum=-1.285;VQSLOD=3.6767;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,102,1397	0/0:14,0:14:27.09:0,27,382	0/0:30,0:21:24.51:0,25,296	0/0:36,0:34:44.17:0,44,680	0/0:22,0:22:42.12:0,42,547	0/0:26,0:26:69.20:0,69,928	0/0:21,0:21:36.10:0,36,510	0/0:37,0:36:62.93:0,63,544	0/0:21,0:21:54.11:0,54,706	0/0:27,0:27:66.20:0,66,890	0/0:21,0:21:51.17:0,51,723	0/0:35,0:35:78.22:0,78,1037	0/0:15,0:15:33.09:0,33,435	0/0:32,0:32:69.21:0,69,929	0/0:37,0:37:87.26:0,87,1194	0/0:28,0:28:69.22:0,69,957	0/0:28,0:28:75.19:0,75,983	0/0:26,0:26:67.03:0,67,862	1/1:14,13:29:48.08:776,48,0	1/1:4,23:27:60.20:1162,60,0	1/1:6,18:25:27.09:543,27,0	0/0:18,0:18:48.13:0,48,633	0/0:22,0:22:48.13:0,48,629	0/0:34,0:34:84.24:0,84,1125	0/0:18,0:18:45.14:0,45,608	0/0:31,0:30:66.21:0,66,902	1/1:3,22:25:51.17:1021,51,0	0/0:10,0:10:15.05:0,15,213
chr10	48431729	.	CA	C	955.19	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.419;DP=740;FS=0.000;HRun=6;HaplotypeScore=84.3926;InbreedingCoeff=0.9919;MQ=69.16;MQ0=5;MQRankSum=-0.530;QD=22.74;ReadPosRankSum=-4.057;VQSLOD=1.5446;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,120,1576	0/0:13,0:13:39.13:0,39,510	0/0:30,0:21:51.54:0,52,612	0/0:39,0:36:92.53:0,93,1114	0/0:23,0:23:57.19:0,57,747	0/0:30,0:30:81.24:0,81,1036	0/0:18,0:18:54.18:0,54,706	1/1:9,33:41:99:1050,99,0	0/0:22,0:22:63.16:0,63,803	0/0:33,0:33:96.30:0,96,1241	0/0:20,0:20:54.18:0,54,707	0/0:29,0:29:78.25:0,78,1025	0/0:15,0:15:42.13:0,42,537	0/0:31,0:31:87.26:0,87,1111	0/0:34,0:34:99:0,102,1321	0/0:25,0:25:75.24:0,75,985	0/0:31,0:31:81.26:0,81,1051	0/0:32,0:32:87.14:0,87,1065	0/0:27,0:26:70.95:0,71,713	0/0:26,0:26:72.10:0,72,613	0/0:23,0:23:38.81:0,39,334	0/0:18,0:18:51.15:0,51,654	0/0:21,0:21:51.17:0,51,670	0/0:32,0:32:87.28:0,87,1143	0/0:20,0:20:57.17:0,57,734	0/0:27,0:26:78.25:0,78,1012	0/0:29,0:29:68.32:0,68,598	0/0:7,0:7:18.06:0,18,236
chr10	48436199	.	G	GGTTTT	17710.94	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=4.957;DP=726;FS=9.291;HRun=0;HaplotypeScore=163.1197;InbreedingCoeff=0.9707;MQ=58.51;MQ0=10;MQRankSum=-11.962;QD=46.61;ReadPosRankSum=0.117;VQSLOD=4.6288;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:46:75.48:0,75,1757	0/0:13,0:13:27.01:0,27,430	0/0:33,0:14:17.48:0,17,230	0/0:28,0:13:3.29:0,3,109	1/1:21,19:41:99:2517,108,0	0/0:19,0:19:48.15:0,48,833	0/0:18,0:18:27.08:0,27,460	1/1:13,19:34:50.78:961,51,0	0/0:33,0:33:75.16:0,75,1252	1/1:17,16:33:84.28:2020,84,0	1/1:9,13:22:57.17:1430,57,0	0/0:17,0:17:36.11:0,36,649	0/0:20,0:20:48.04:0,48,739	1/1:15,9:24:63.14:1353,63,0	0/0:26,0:26:45.14:0,45,795	0/0:17,0:17:42.14:0,42,797	1/1:18,11:29:46.94:1184,47,0	1/1:17,4:21:30.04:635,30,0	1/1:17,9:27:39.10:736,39,0	1/1:12,26:38:69.23:1858,69,0	1/1:11,1:11:12.04:277,12,0	0/0:30,0:30:63.19:0,63,1145	0/0:24,0:24:51.05:0,51,807	0/0:22,0:21:46.02:0,46,798	1/1:10,10:20:45.08:1073,45,0	1/1:20,16:36:99:2406,99,0	1/1:14,17:33:30.05:752,30,0	1/1:4,3:7:21.07:509,21,0
chr10	48436217	.	G	GT	2371.38	PASS	AB=0.967;AC=31;AF=0.554;AN=56;BaseQRankSum=11.307;DP=691;FS=6.471;HRun=15;HaplotypeScore=159.2394;InbreedingCoeff=0.7582;MQ=52.63;MQ0=15;MQRankSum=-10.444;QD=5.34;ReadPosRankSum=-1.507;VQSLOD=0.7344;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:47:53.11:0,53,339	0/0:9,1:11:19.51:0,20,113	0/0:34,0:11:16.35:0,16,92	0/1:25,0:7:0.24:0,0,1	1/1:40,0:40:66.51:294,67,0	0/0:18,0:17:3.89:0,4,129	0/0:15,0:15:24.48:0,24,146	1/1:34,1:33:10.70:108,11,0	0/1:25,1:32:48.99:49,0,148	1/1:40,0:41:70.09:311,70,0	1/1:17,0:20:36.55:158,37,0	0/0:13,0:13:2.43:0,2,17	0/0:17,0:19:23.15:0,23,143	1/1:26,0:26:38.26:167,38,0	0/0:23,1:26:15.95:0,16,195	0/0:19,0:19:37.03:0,37,217	1/1:27,0:27:35.78:186,36,0	1/1:15,0:15:15.47:66,15,0	1/1:16,3:20:16.55:200,17,0	1/1:22,12:34:8.90:311,9,0	1/1:10,1:11:14.58:90,15,0	0/1:24,2:27:7.35:7,0,175	0/0:19,1:21:8.49:0,8,118	0/0:20,1:22:30.83:0,31,180	1/1:17,0:17:39:173,39,0	1/1:41,0:41:47.68:211,48,0	1/1:17,4:21:21.38:163,21,0	1/1:8,0:8:19.20:85,19,0
chr10	48436221	.	T	TTTG	8417.46	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=11.988;DP=682;FS=0.000;HRun=0;HaplotypeScore=153.6330;InbreedingCoeff=0.7378;MQ=52.55;MQ0=15;MQRankSum=-10.410;QD=26.72;ReadPosRankSum=1.722;VQSLOD=4.5981;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,118,1457	0/0:11,0:11:33:0,33,423	0/0:33,0:11:13.12:0,13,247	0/0:26,0:7:1.85:0,2,39	1/1:21,19:40:99:1318,111,0	0/0:19,0:18:54.05:0,54,664	0/0:14,0:14:41.96:0,42,533	0/1:33,0:30:99:105,0,100	0/0:32,0:32:76.53:0,77,898	1/1:14,24:40:99:1534,108,0	1/1:10,9:20:55.69:721,56,0	0/0:13,0:13:36.02:0,36,342	0/0:18,0:18:53.96:0,54,636	1/1:8,18:26:59.47:865,59,0	0/0:26,0:25:68.90:0,69,856	0/0:19,0:19:54.14:0,54,756	1/1:6,19:26:41.85:908,42,0	1/1:6,9:16:20.98:300,21,0	0/0:20,0:19:27.85:0,28,257	0/1:34,0:34:42.34:42,0,201	0/1:12,0:11:26.41:26,0,63	0/0:27,0:27:78:0,78,950	0/0:19,0:19:48.50:0,49,594	0/0:21,0:20:48.52:0,49,625	1/1:4,14:18:47.98:808,48,0	1/1:21,21:42:99:1402,118,0	0/0:22,0:21:17.96:0,18,68	1/1:2,6:8:24.03:387,24,0
chr10	48436222	.	T	TTG	4614.77	PASS	AB=1.000;AC=20;AF=0.357;AN=56;BaseQRankSum=15.256;DP=679;FS=0.649;HRun=0;HaplotypeScore=154.6062;InbreedingCoeff=0.7780;MQ=52.64;MQ0=15;MQRankSum=-9.775;QD=16.42;ReadPosRankSum=2.237;VQSLOD=5.0604;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,124,1402	0/0:11,0:11:32.99:0,33,389	0/0:31,0:11:13.09:0,13,207	0/0:26,0:7:2.50:0,3,38	1/1:36,3:40:99:897,111,0	0/0:19,0:18:54:0,54,622	0/0:14,0:14:41.96:0,42,496	0/1:33,0:30:19.41:19,0,186	0/0:31,0:31:76.38:0,76,819	1/1:39,0:39:84.79:772,85,0	1/1:19,1:20:24.39:368,24,0	0/0:14,0:14:36.02:0,36,338	0/0:18,0:18:53.96:0,54,598	1/1:27,0:27:59.23:458,59,0	0/0:27,0:26:68.85:0,69,786	0/0:18,0:18:54.13:0,54,697	1/1:25,1:26:38.99:461,39,0	1/1:16,1:17:20.95:197,21,0	0/0:20,0:19:7.88:0,8,235	0/0:33,0:33:2.79:0,3,314	0/1:12,0:11:30.51:31,0,65	0/0:27,0:27:77.89:0,78,880	0/0:19,0:19:48.50:0,48,549	0/0:21,0:20:48.95:0,49,600	1/1:18,0:18:25.22:365,25,0	1/1:41,1:42:99:847,115,0	0/0:22,0:21:24.62:0,25,125	1/1:6,1:7:21:199,21,0
chr10	48438193	.	TGG	T	2020.52	PASS	AB=0.775;AC=14;AF=0.250;AN=56;BaseQRankSum=-0.117;DP=493;FS=12.719;HRun=12;HaplotypeScore=73.2206;InbreedingCoeff=0.6095;MQ=69.92;MQ0=2;MQRankSum=0.737;QD=9.58;ReadPosRankSum=6.619;VQSLOD=0.2282;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:23,1:25:0.09:0,0,276	0/0:7,0:7:8.51:0,9,75	0/0:14,0:14:20.58:0,21,212	0/1:17,0:15:23.51:24,0,92	0/0:12,0:13:15:0,15,145	0/0:9,0:9:17.55:0,18,233	0/0:17,0:20:40.51:0,41,433	1/1:14,14:29:26.65:249,27,0	0/0:16,0:18:35.55:0,36,391	0/0:11,0:12:8.97:0,9,76	0/0:9,0:9:18:0,18,186	0/0:8,1:24:8.60:0,9,125	0/0:6,0:21:30.42:0,30,116	0/0:16,0:16:17.73:0,18,155	0/0:15,0:19:30.98:0,31,232	0/0:17,0:21:41.57:0,42,378	0/0:21,0:25:56.53:0,57,525	0/0:12,0:13:20.98:0,21,193	1/1:6,9:16:26.74:256,27,0	1/1:11,8:20:32.76:315,33,0	1/1:13,25:40:74.33:706,74,0	0/1:6,1:15:7.05:7,0,63	0/0:6,0:9:4.99:0,5,18	0/1:8,5:24:62.64:112,0,63	0/0:11,0:11:20.99:0,21,181	0/0:10,0:10:11.98:0,12,117	1/1:4,18:22:53.83:530,54,0	0/0:10,0:10:15.47:0,15,156
chr10	48440190	.	T	TGA	3926.17	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-11.295;DP=727;FS=2.645;HRun=0;HaplotypeScore=84.4571;InbreedingCoeff=0.9893;MQ=79.03;MQ0=0;MQRankSum=-0.822;QD=40.06;ReadPosRankSum=-0.812;VQSLOD=5.3444;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:75.24:0,75,975	0/0:10,0:10:24.08:0,24,311	0/0:17,0:17:45.14:0,45,571	0/0:21,0:21:34.36:0,34,455	0/0:21,0:21:57.14:0,57,741	0/0:27,0:27:69.21:0,69,883	0/0:33,0:33:90.25:0,90,1139	0/0:37,0:37:90.27:0,90,1134	0/0:30,0:30:84.22:0,84,1059	0/0:19,0:19:54.18:0,54,702	0/0:7,0:7:15.05:0,15,195	0/0:43,0:43:99:0,117,1505	0/0:29,0:29:84.26:0,84,1076	0/0:50,0:51:99:0,135,1700	0/0:43,0:43:99:0,123,1555	0/0:31,0:31:84.27:0,84,1092	0/0:45,0:45:99:0,117,1488	0/0:32,0:32:78.25:0,78,1012	1/1:5,13:18:39.13:663,39,0	1/1:3,9:12:24.08:408,24,0	1/1:3,36:40:92.82:1581,93,0	0/0:6,0:6:15.05:0,15,195	0/0:12,0:12:30.10:0,30,390	0/0:47,0:47:99:0,126,1619	0/0:11,0:11:27:0,27,329	0/0:22,0:22:60.18:0,60,765	1/1:2,26:28:75.26:1274,75,0	0/0:10,0:10:27.09:0,27,351
chr10	48440724	.	T	TGAA	18520.86	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-14.565;DP=708;FS=7.815;HRun=0;HaplotypeScore=94.0249;InbreedingCoeff=0.9977;MQ=78.22;MQ0=0;MQRankSum=-10.940;QD=54.31;ReadPosRankSum=1.545;VQSLOD=7.1727;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:58:99:0,166,2660	0/0:11,0:11:33.11:0,33,549	0/0:17,0:17:45.04:0,45,645	0/0:26,0:26:62.84:0,63,881	1/1:1,14:16:36.04:718,36,0	0/0:22,0:22:60.19:0,60,970	0/0:41,0:41:99:0,120,1943	1/1:2,13:17:45.12:893,45,0	0/0:17,0:17:51.14:0,51,798	1/1:1,32:33:93.32:2085,93,0	1/1:2,18:20:47.97:938,48,0	0/0:25,0:25:75.24:0,75,1223	0/0:31,0:31:90.28:0,90,1448	1/1:4,28:32:81.28:1817,81,0	0/0:39,0:39:99:0,105,1690	0/0:24,0:24:72.25:0,72,1199	1/1:0,36:36:93.79:2106,94,0	1/1:3,19:24:57.20:1287,57,0	1/1:1,15:16:36.12:804,36,0	1/1:1,14:15:39.09:793,39,0	1/1:1,37:39:84.13:1740,84,0	0/0:10,0:10:30.10:0,30,499	0/0:9,0:9:15.05:0,15,250	0/0:37,0:37:99:0,102,1655	1/1:2,16:19:48.16:1054,48,0	1/1:0,22:23:69.20:1515,69,0	1/1:3,32:36:84.29:1886,84,0	1/1:0,15:15:39.13:883,39,0
chr10	48441044	.	TTA	T	4798.77	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=12.521;DP=836;FS=4.726;HRun=0;HaplotypeScore=97.6596;InbreedingCoeff=0.9994;MQ=83.19;MQ0=0;MQRankSum=-2.425;QD=44.03;ReadPosRankSum=2.356;VQSLOD=6.5386;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:60,0:60:99:0,181,3564	0/0:13,0:13:39.11:0,39,704	0/0:29,0:29:87.19:0,87,1586	0/0:26,0:26:69.70:0,70,1253	0/0:16,0:16:48.12:0,48,934	0/0:21,0:21:57.20:0,57,1142	0/0:34,0:34:99:0,102,2061	0/0:29,0:29:87.29:0,87,1729	0/0:27,0:27:81.28:0,81,1633	0/0:35,0:35:99:0,105,2048	0/0:15,0:15:39.13:0,39,745	0/0:37,0:37:99:0,111,2233	0/0:34,0:34:99:0,102,2069	0/0:24,0:24:72.25:0,72,1451	0/0:38,0:38:99:0,114,2254	0/0:40,0:40:99:0,120,2410	0/0:49,0:47:99:0,147,2910	0/0:24,0:24:69.24:0,69,1398	1/1:0,23:23:66.19:1018,66,0	1/1:0,25:25:75.25:1193,75,0	1/1:0,36:36:96.33:1565,96,0	0/0:20,0:20:60.21:0,60,1193	0/0:20,0:20:60.20:0,60,1179	0/0:52,0:52:99:0,156,3016	0/0:40,0:40:99:0,120,2420	0/0:36,0:36:99:0,105,1976	1/1:0,25:25:63.21:1023,63,0	0/0:8,0:8:24.08:0,24,487
chr10	48442257	.	TA	T	7065.34	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=12.974;DP=641;FS=7.192;HRun=3;HaplotypeScore=64.0008;InbreedingCoeff=0.9999;MQ=81.47;MQ0=0;MQRankSum=-2.773;QD=33.97;ReadPosRankSum=2.432;VQSLOD=5.4394;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,154,2185	0/0:12,0:12:36.10:0,36,499	0/0:22,0:22:60.20:0,60,842	0/0:21,0:21:54.16:0,54,750	1/1:1,21:22:63.20:781,63,0	0/0:16,0:16:45.14:0,45,630	0/0:23,0:23:69.20:0,69,955	1/1:2,36:38:99:1214,99,0	0/0:18,0:18:51.14:0,51,698	1/1:1,17:18:54.06:609,54,0	1/1:0,14:14:39.12:482,39,0	0/0:25,0:25:72.24:0,72,1033	0/0:25,0:25:72.24:0,72,1031	1/1:0,22:22:63.20:780,63,0	0/0:29,0:29:84.28:0,84,1210	0/0:31,0:31:90.29:0,90,1278	1/1:0,25:25:66.21:818,66,0	1/1:0,12:12:30.09:372,30,0	0/0:25,0:25:50.22:0,50,891	0/0:18,0:18:51.16:0,51,716	0/0:18,0:18:54.17:0,54,760	0/0:26,0:26:78.23:0,78,1072	0/0:16,0:16:45.15:0,45,646	0/0:23,0:23:66.22:0,66,945	1/1:1,17:18:51.16:632,51,0	1/1:2,24:26:72.23:893,72,0	0/0:34,0:34:99:0,102,1460	1/1:0,13:13:39.12:484,39,0
chr10	48442999	.	TA	T	4468.66	PASS	AB=0.875;AC=30;AF=0.536;AN=56;BaseQRankSum=9.674;DP=480;FS=1.789;HRun=12;HaplotypeScore=53.3187;InbreedingCoeff=0.7591;MQ=74.62;MQ0=3;MQRankSum=1.202;QD=15.15;ReadPosRankSum=0.187;VQSLOD=5.4860;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:75.06:0,75,721	0/0:8,0:8:9.02:0,9,91	0/1:17,0:11:5.34:5,0,85	0/0:20,0:10:3.74:0,4,33	1/1:2,21:23:53.63:404,54,0	0/0:18,0:18:45.07:0,45,444	0/0:13,0:14:32.37:0,32,319	1/1:8,14:23:16.54:295,17,0	0/0:14,1:15:15.86:0,16,340	1/1:4,14:18:41.78:315,42,0	1/1:2,13:15:38.80:297,39,0	0/0:6,0:6:12.02:0,12,121	0/0:14,0:14:15.45:0,15,305	1/1:2,17:19:38.85:301,39,0	0/0:13,0:13:39.06:0,39,388	0/0:27,0:28:44.86:0,45,593	1/1:3,25:29:64.79:493,65,0	1/1:3,21:24:50.79:394,51,0	1/1:5,11:17:4.59:201,5,0	1/1:4,14:18:13.85:265,14,0	1/1:1,3:4:5.97:46,6,0	0/1:6,2:8:17.41:17,0,131	0/0:12,0:12:33.05:0,33,327	0/0:7,0:7:2.74:0,3,129	1/1:3,26:29:41.42:503,41,0	1/1:1,19:20:56.44:413,56,0	1/1:3,22:25:61.98:471,62,0	1/1:1,3:4:5.75:46,6,0
chr10	48445689	.	TA	T	5022.55	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=13.744;DP=483;FS=2.064;HRun=7;HaplotypeScore=73.9694;InbreedingCoeff=0.9889;MQ=69.20;MQ0=0;MQRankSum=-11.892;QD=25.76;ReadPosRankSum=-1.630;VQSLOD=4.9077;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:78.23:0,78,966	0/0:4,0:4:12.04:0,12,151	0/0:18,0:16:41.91:0,42,476	0/0:11,0:11:14.16:0,14,285	1/1:2,28:30:65.79:661,66,0	0/0:30,0:30:90.27:0,90,1118	0/0:12,0:12:33.10:0,33,403	1/1:5,23:28:72.15:724,72,0	0/0:13,0:13:36.12:0,36,453	1/1:3,17:20:60.09:595,60,0	1/1:2,13:15:41.93:395,42,0	0/0:19,0:19:51.16:0,51,630	0/0:14,0:14:42.13:0,42,525	1/1:3,13:16:47.90:441,48,0	0/0:18,0:18:54.15:0,54,655	0/0:16,0:16:45.14:0,45,566	1/1:5,14:19:45.10:458,45,0	1/1:4,11:15:36.02:348,36,0	0/0:16,0:16:36.12:0,36,453	0/0:17,0:17:48.15:0,48,604	0/0:20,0:20:57.18:0,57,716	0/0:15,0:15:39.12:0,39,491	0/0:13,0:14:38.96:0,39,467	0/0:7,0:7:15.05:0,15,189	1/1:3,16:19:48.10:483,48,0	1/1:4,23:27:72.16:734,72,0	0/0:14,0:14:39.11:0,39,479	1/1:0,6:6:18.04:184,18,0
chr10	48445711	.	T	TGG	8627.86	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=13.593;DP=452;FS=2.672;HRun=2;HaplotypeScore=75.7617;InbreedingCoeff=0.9698;MQ=60.07;MQ0=3;MQRankSum=-15.263;QD=47.67;ReadPosRankSum=-3.632;VQSLOD=3.7420;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:66.22:0,66,972	0/0:5,0:5:15.05:0,15,221	0/0:17,0:11:30.10:0,30,442	0/0:14,0:10:30.10:0,30,420	1/1:1,31:32:77.94:1443,78,0	0/0:27,0:27:78.23:0,78,1126	0/0:12,0:12:33.10:0,33,466	1/1:13,22:33:84.28:1471,84,0	0/0:10,0:10:27.09:0,27,392	1/1:1,12:13:39.13:729,39,0	1/1:1,12:12:36.12:669,36,0	0/0:16,0:16:45.15:0,45,663	0/0:15,0:15:39.13:0,39,574	1/1:3,14:17:45.15:839,45,0	0/0:19,0:19:51.16:0,51,732	0/0:16,0:16:48.16:0,48,707	1/1:4,15:19:45.15:818,45,0	1/1:2,5:7:18.06:337,18,0	0/0:15,0:15:42.14:0,42,619	0/0:15,0:15:39.10:0,39,551	0/0:20,1:21:4.13:0,4,783	0/0:13,0:13:39.13:0,39,574	0/0:12,0:12:36.12:0,36,530	0/0:6,0:6:15.05:0,15,221	1/1:4,12:16:42.12:723,42,0	1/1:2,21:24:72.25:1320,72,0	0/0:14,0:14:42.13:0,42,598	1/1:3,2:5:15.05:280,15,0
chr10	48447317	.	A	AC	2248.02	PASS	AB=0.801;AC=27;AF=0.482;AN=56;BaseQRankSum=2.939;DP=512;FS=9.589;HRun=9;HaplotypeScore=67.6895;InbreedingCoeff=0.7253;MQ=77.85;MQ0=0;MQRankSum=-1.731;QD=9.49;ReadPosRankSum=-2.067;VQSLOD=1.0747;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:75.40:0,75,644	0/0:8,0:8:20.99:0,21,182	0/0:20,0:17:21.74:0,22,226	0/1:23,0:18:0.45:0,0,78	1/1:1,12:17:14.87:145,15,0	0/0:20,1:21:23.80:0,24,436	0/0:19,0:19:47.98:0,48,417	1/1:8,1:13:9.57:57,10,0	0/0:21,0:21:56.97:0,57,490	1/1:6,0:13:17.17:91,17,0	1/1:2,2:16:37.30:223,37,0	0/0:26,1:27:36.29:0,36,539	0/0:19,1:20:23.79:0,24,431	1/1:5,2:17:1.78:109,2,0	0/0:37,0:37:99:0,101,862	0/0:21,1:21:20.78:0,21,406	1/1:4,4:19:37.60:261,38,0	1/1:3,1:10:20.05:118,20,0	1/1:3,6:9:20.89:201,21,0	0/1:12,4:17:50.46:132,0,50	1/1:3,12:14:1.06:239,1,0	0/0:8,0:8:14.98:0,15,130	0/0:16,0:16:41.95:0,42,361	0/0:22,0:22:56.98:0,57,494	1/1:10,2:15:23.37:178,23,0	1/1:13,10:26:41.30:349,41,0	0/1:10,14:24:36.18:323,0,36	1/1:0,0:3:5.68:28,6,0
chr10	48451890	.	CT	C	6763.68	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=17.987;DP=599;FS=3.738;HRun=5;HaplotypeScore=103.7038;InbreedingCoeff=0.9993;MQ=76.87;MQ0=0;MQRankSum=-6.413;QD=30.06;ReadPosRankSum=-0.012;VQSLOD=4.5760;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,114,1536	0/0:8,0:8:24.08:0,24,327	0/0:18,0:18:33.09:0,33,404	0/0:23,0:22:24.64:0,25,425	1/1:5,30:35:96.25:1072,96,0	0/0:14,0:14:42.14:0,42,572	0/0:16,0:16:39.11:0,39,516	1/1:8,31:38:99:1124,102,0	0/0:20,0:20:54.18:0,54,736	1/1:2,25:27:75.21:850,75,0	1/1:0,18:18:54.15:612,54,0	0/0:16,0:16:45.15:0,45,613	0/0:18,0:18:48.15:0,48,640	1/1:2,14:16:45.11:500,45,0	0/0:24,0:24:63.21:0,63,852	0/0:23,0:23:60.19:0,60,805	1/1:2,13:14:36.10:406,36,0	1/1:4,11:15:33.09:374,33,0	0/0:23,0:23:66.21:0,66,889	0/0:28,0:28:78.23:0,78,1030	0/0:13,0:13:33.09:0,33,434	0/0:19,0:19:51.17:0,51,694	0/0:27,0:27:81.27:0,81,1106	0/0:14,0:14:42.14:0,42,574	1/1:1,14:15:36.10:406,36,0	1/1:3,24:27:78.21:874,78,0	0/0:31,0:31:90.25:0,90,1180	1/1:3,15:18:48.14:543,48,0
chr10	48451916	.	T	TA	4581.25	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=16.226;DP=602;FS=0.726;HRun=10;HaplotypeScore=125.2867;InbreedingCoeff=0.8976;MQ=74.38;MQ0=1;MQRankSum=-9.421;QD=16.84;ReadPosRankSum=-4.443;VQSLOD=2.9830;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:69.37:0,69,693	0/0:6,0:6:17.98:0,18,148	0/0:19,0:18:10.13:0,10,119	0/1:20,0:20:20.17:20,0,50	1/1:11,29:41:78.02:807,78,0	0/0:18,0:18:47.93:0,48,394	0/0:13,0:13:32.96:0,33,271	1/1:16,3:41:77.31:429,77,0	0/0:18,0:19:49.93:0,50,395	1/1:8,16:25:44.98:461,45,0	1/1:9,12:22:17.24:347,17,0	0/0:16,0:16:38.16:0,38,299	0/0:15,0:15:9.58:0,10,219	1/1:7,9:16:11.44:319,11,0	0/0:26,0:26:68.90:0,69,566	0/0:16,0:17:46.99:0,47,375	1/1:8,13:20:17.46:384,17,0	1/1:5,9:14:27.02:287,27,0	0/0:19,0:19:41.92:0,42,340	0/0:22,0:22:53.88:0,54,433	0/0:13,0:13:32.93:0,33,271	0/0:15,0:15:43.99:0,44,351	0/0:27,0:28:70.89:0,71,562	0/0:19,0:19:38.93:0,39,320	1/1:5,16:22:20.31:405,20,0	1/1:6,25:31:75.01:775,75,0	0/0:31,0:31:68.75:0,69,544	1/1:6,11:17:14.42:347,14,0
chr10	48452035	.	G	GA	1987.09	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-10.991;DP=658;FS=2.145;HRun=9;HaplotypeScore=101.9464;InbreedingCoeff=0.9828;MQ=73.92;MQ0=2;MQRankSum=0.081;QD=22.08;ReadPosRankSum=-0.752;VQSLOD=3.4104;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:83.84:0,84,708	0/0:6,0:6:15:0,15,130	0/0:37,0:26:16.08:0,16,341	0/0:26,0:20:38.39:0,38,295	0/0:29,0:29:51.50:0,52,195	0/0:18,0:18:41.97:0,42,364	0/0:20,0:21:56.01:0,56,472	0/0:39,0:38:60.89:0,61,203	0/0:22,0:22:53.98:0,54,469	0/0:25,0:25:43.44:0,43,133	0/0:24,0:24:30.53:0,31,89	0/0:11,0:11:32.99:0,33,286	0/0:22,0:22:56.99:0,57,495	0/0:16,0:16:24.44:0,24,71	0/0:22,0:22:59.98:0,60,521	0/0:32,0:32:77.95:0,78,673	0/0:31,0:31:48.69:0,49,165	0/0:24,0:24:34.62:0,35,101	1/1:2,15:17:45.12:497,45,0	1/1:6,26:34:71.24:747,71,0	1/1:3,13:16:33.09:365,33,0	0/0:22,0:22:56.92:0,57,483	0/0:24,0:24:68.97:0,69,596	0/0:25,0:25:71.97:0,72,619	0/0:23,0:23:33.54:0,34,112	0/0:29,0:29:57.97:0,58,198	1/1:2,21:23:28.09:538,28,0	0/0:10,0:10:12.21:0,12,36
chr10	48452044	.	AG	A	7038.52	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=7.857;DP=659;FS=0.311;HRun=3;HaplotypeScore=81.8170;InbreedingCoeff=0.9956;MQ=77.44;MQ0=2;MQRankSum=-0.919;QD=28.85;ReadPosRankSum=0.495;VQSLOD=4.1061;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:84.13:0,84,1042	0/0:5,0:5:13.82:0,14,135	0/0:32,0:23:33.58:0,34,480	0/0:28,0:23:45.31:0,45,499	1/1:1,25:26:64.36:769,64,0	0/0:20,0:20:57.07:0,57,672	0/0:20,0:20:53.17:0,53,717	1/1:2,35:36:99:1182,105,0	0/0:22,0:22:66.18:0,66,842	1/1:0,27:27:81.16:914,81,0	1/1:1,21:22:56.93:621,57,0	0/0:12,0:12:36.11:0,36,473	0/0:19,0:19:57.18:0,57,757	1/1:0,19:19:36.11:439,36,0	0/0:23,0:23:69.19:0,69,878	0/0:29,0:29:87.24:0,87,1118	1/1:2,28:30:63.20:773,63,0	1/1:1,18:19:51.16:627,51,0	0/0:20,0:20:59.84:0,60,474	0/0:34,0:34:98.38:0,98,801	0/0:16,0:16:41.88:0,42,339	0/0:22,0:22:63.15:0,63,785	0/0:26,0:26:78.21:0,78,997	0/0:25,0:25:72.23:0,72,959	1/1:1,22:23:45.14:554,45,0	1/1:1,29:30:77.80:938,78,0	0/0:29,0:29:74.19:0,74,568	1/1:0,11:11:18.06:221,18,0
chr10	48452872	.	C	CT	11897.24	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=1.606;DP=848;FS=1.826;HRun=1;HaplotypeScore=119.4498;InbreedingCoeff=0.9996;MQ=70.23;MQ0=0;MQRankSum=-8.722;QD=42.49;ReadPosRankSum=-1.560;VQSLOD=4.1728;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:57:99:0,169,2179	0/0:15,0:15:42.14:0,42,545	0/0:15,0:15:36.01:0,36,408	0/0:11,0:11:24.04:0,24,270	1/1:2,31:33:98.23:1359,98,0	0/0:35,0:35:99:0,105,1359	0/0:28,0:28:78.22:0,78,982	1/1:1,37:38:99:1622,111,0	0/0:33,0:33:96.31:0,96,1246	1/1:1,25:26:78.22:1138,78,0	1/1:0,32:32:90.26:1310,90,0	0/0:36,0:36:99:0,108,1374	0/0:38,0:38:99:0,114,1437	1/1:1,34:35:99:1547,105,0	0/0:46,0:46:99:0,138,1750	0/0:36,0:36:99:0,108,1388	1/1:3,19:22:60.20:898,60,0	1/1:0,20:20:60.20:899,60,0	0/0:16,0:16:48.16:0,48,623	0/0:30,0:30:90.29:0,90,1168	0/0:45,0:45:99:0,135,1753	0/0:37,0:37:99:0,108,1402	0/0:36,0:36:99:0,99,1284	0/0:30,0:30:87.28:0,87,1129	1/1:5,25:30:84.27:1218,84,0	1/1:3,29:32:93.27:1367,93,0	0/0:24,0:24:69.22:0,69,895	1/1:0,12:12:36.12:539,36,0
chr10	48452925	.	A	ATACACGG	25767.23	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=15.517;DP=886;FS=15.032;HRun=0;HaplotypeScore=251.1791;InbreedingCoeff=0.9998;MQ=86.48;MQ0=0;MQRankSum=-21.338;QD=91.70;ReadPosRankSum=-4.696;VQSLOD=3.4223;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,153,3991	0/0:16,0:16:45.13:0,45,1154	0/0:38,0:38:99:0,104,2457	0/0:31,0:31:81.20:0,81,1813	1/1:12,20:33:54.19:1947,54,0	0/0:22,0:22:66.21:0,66,1715	0/0:31,0:31:84.29:0,84,2200	1/1:27,16:46:99:4457,132,0	0/0:36,0:36:99:0,105,2671	1/1:9,14:23:66.23:2354,66,0	1/1:13,20:34:69.22:2491,69,0	0/0:44,0:44:99:0,132,3453	0/0:37,0:37:99:0,105,2678	1/1:10,22:32:90.26:3253,90,0	0/0:45,0:45:99:0,135,3628	0/0:38,0:38:99:0,111,2797	1/1:7,8:15:36.10:1219,36,0	1/1:7,6:13:27.09:1078,27,0	0/0:20,0:20:54.19:0,54,1423	0/0:25,0:25:75.24:0,75,1931	0/0:42,0:42:99:0,123,3242	0/0:27,0:27:81.28:0,81,2106	0/0:35,0:35:99:0,105,2657	0/0:36,0:36:99:0,108,2859	1/1:7,25:32:93.30:3570,93,0	1/1:10,24:35:99:3702,102,0	0/0:30,0:29:81.28:0,81,2154	1/1:6,11:18:45.11:1696,45,0
chr10	48453456	.	A	AT	4570.44	PASS	AB=0.858;AC=22;AF=0.393;AN=56;BaseQRankSum=-8.367;DP=656;FS=0.335;HRun=12;HaplotypeScore=67.2171;InbreedingCoeff=0.7041;MQ=76.43;MQ0=1;MQRankSum=-2.481;QD=15.34;ReadPosRankSum=-0.799;VQSLOD=5.3647;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:32:76.38:0,76,540	0/1:3,1:4:17.23:17,0,54	0/1:25,0:19:36.67:54,0,37	0/1:18,0:16:12.94:13,0,43	1/1:8,27:36:68.75:618,69,0	0/0:21,0:21:53.59:0,54,386	0/0:19,0:20:52.45:0,52,362	1/1:6,18:26:57.09:487,57,0	0/0:24,0:24:56.57:0,57,410	1/1:8,17:25:44.17:444,44,0	0/1:10,14:24:48.47:264,0,48	0/0:22,0:22:56.64:0,57,416	0/0:14,0:14:29.73:0,30,215	1/1:4,17:21:50.94:476,51,0	0/0:30,0:30:54.18:0,54,504	0/0:19,0:20:55.69:0,56,398	1/1:3,37:40:75.12:729,75,0	1/1:3,14:17:30.05:292,30,0	0/0:21,0:21:53.62:0,54,388	0/0:37,0:39:66.48:0,66,610	0/0:15,1:16:31.91:0,32,242	0/0:18,0:18:44.69:0,45,323	0/0:24,0:24:55.66:0,56,400	0/0:20,0:20:21.67:0,22,320	1/1:2,23:26:35.02:489,35,0	1/1:5,14:19:23.06:367,23,0	0/0:37,0:37:86.32:0,86,623	1/1:3,14:17:33.05:321,33,0
chr10	48455196	.	CT	C	10465.40	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=21.396;DP=734;FS=1.231;HRun=1;HaplotypeScore=134.0669;InbreedingCoeff=1.0000;MQ=89.19;MQ0=0;MQRankSum=-4.112;QD=39.79;ReadPosRankSum=2.611;VQSLOD=4.4867;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,144,2161	0/0:12,0:12:36.12:0,36,576	0/0:30,0:30:83.47:0,83,1348	0/0:27,0:27:70.22:0,70,1124	1/1:1,40:41:99:1487,108,0	0/0:29,0:29:87.30:0,87,1390	0/0:29,0:29:87.28:0,87,1368	1/1:0,29:29:87.28:1199,87,0	0/0:20,0:20:60.20:0,60,959	1/1:0,24:24:72.23:990,72,0	1/1:0,27:27:72.24:1007,72,0	0/0:24,0:24:72.25:0,72,1151	0/0:24,0:24:72.25:0,72,1149	1/1:0,25:25:69.23:964,69,0	0/0:33,0:33:99:0,99,1488	0/0:25,0:25:75.24:0,75,1162	1/1:0,33:33:96.32:1343,96,0	1/1:0,14:14:42.14:587,42,0	0/0:24,0:24:72.25:0,72,1149	0/0:37,0:37:99:0,108,1704	0/0:26,0:26:75.26:0,75,1199	0/0:12,0:12:36.11:0,36,551	0/0:23,0:23:69.24:0,69,1103	0/0:25,0:25:75.26:0,75,1198	1/1:0,25:25:72.24:1002,72,0	1/1:0,30:30:90.30:1257,90,0	0/0:23,0:23:69.24:0,69,1097	1/1:0,15:15:45.15:629,45,0
chr10	48455679	.	A	AGCTCACTGCTCC	19016.02	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-11.140;DP=542;FS=0.810;HRun=0;HaplotypeScore=161.2250;InbreedingCoeff=0.9680;MQ=67.98;MQ0=0;MQRankSum=-13.143;QD=102.24;ReadPosRankSum=-2.371;VQSLOD=4.4233;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:75.26:0,75,2601	0/0:7,0:7:21.07:0,21,777	0/0:10,0:10:15.01:0,15,316	0/0:16,0:15:10.91:0,11,210	1/1:0,10:16:21.07:1273,21,0	0/0:12,0:12:33.11:0,33,1075	0/0:26,0:26:66.21:0,66,2145	1/1:2,4:36:99:4675,102,0	0/0:24,0:24:63.20:0,63,2106	1/1:0,14:25:68.96:3526,69,0	1/1:0,3:9:9.03:546,9,0	0/0:24,0:24:69.22:0,69,2297	0/0:28,0:28:81.28:0,81,2875	1/1:0,16:28:51.18:3063,51,0	0/0:23,0:23:63.22:0,63,2333	0/0:25,0:25:69.24:0,69,2349	1/1:5,4:23:21.07:1277,21,0	1/1:1,5:16:15.05:914,15,0	0/0:13,0:13:33.10:0,33,963	0/0:9,0:9:24.08:0,24,889	0/0:33,0:33:99:0,99,3505	0/0:10,0:10:24.07:0,24,737	0/0:9,0:9:24.08:0,24,828	0/0:32,0:32:96.29:0,96,3332	1/1:1,6:10:18.06:1092,18,0	1/1:1,7:15:39.13:2101,39,0	0/0:28,0:27:84.25:0,84,2643	1/1:0,3:8:9.03:548,9,0
chr10	48456081	.	TG	T	5101.35	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=15.946;DP=657;FS=3.356;HRun=6;HaplotypeScore=80.5351;InbreedingCoeff=0.9946;MQ=81.91;MQ0=0;MQRankSum=-2.537;QD=26.99;ReadPosRankSum=-0.085;VQSLOD=5.1512;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,114,1480	0/0:5,0:5:15.05:0,15,197	0/0:28,0:28:50.01:0,50,647	0/0:29,0:28:54.28:0,54,795	1/1:1,23:24:62.76:640,63,0	0/0:31,0:31:90.29:0,90,1183	0/0:33,0:33:93.24:0,93,1176	1/1:4,26:28:69.13:729,69,0	0/0:20,0:20:60.18:0,60,775	1/1:0,19:19:57.10:599,57,0	1/1:0,7:7:21.05:225,21,0	0/0:34,0:34:90.27:0,90,1155	0/0:22,0:22:63.13:0,63,779	1/1:0,19:19:54.14:580,54,0	0/0:27,0:27:75.23:0,75,972	0/0:19,0:19:54.12:0,54,689	1/1:3,27:30:75.19:806,75,0	1/1:5,19:24:54.13:580,54,0	0/0:18,0:18:45.13:0,45,575	0/0:25,0:25:72.22:0,72,931	0/0:21,0:21:63.19:0,63,814	0/0:18,0:18:54.16:0,54,695	0/0:16,0:16:45.15:0,45,592	0/0:49,0:49:99:0,141,1825	1/1:1,13:14:33.04:342,33,0	1/1:0,14:14:42.07:439,42,0	0/0:31,0:31:90.26:0,90,1153	1/1:0,8:8:15.04:161,15,0
chr10	48456186	.	C	CACACA	1780.29	PASS	AB=0.779;AC=12;AF=0.214;AN=56;BaseQRankSum=5.538;DP=564;FS=3.203;HRun=0;HaplotypeScore=153.7171;InbreedingCoeff=-0.2696;MQ=63.61;MQ0=14;MQRankSum=-7.823;QD=7.88;ReadPosRankSum=-4.917;VQSLOD=1.1609;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:30:84.28:0,84,1562	0/0:11,0:11:33.10:0,33,526	0/0:31,0:17:48.10:0,48,641	0/0:37,0:22:63.21:0,63,1019	0/0:10,0:14:11.04:0,11,158	0/0:18,0:18:54.18:0,54,1008	0/0:19,0:21:54.16:0,54,1004	0/1:23,0:28:99:594,0,326	0/0:14,0:14:39.13:0,39,789	0/1:11,6:20:99:315,0,204	0/0:3,0:6:3.01:0,3,40	0/1:22,0:24:52.21:52,0,201	0/1:14,0:16:99:104,0,119	0/1:13,0:17:31.62:32,0,242	0/0:24,0:24:66.20:0,66,1224	0/0:15,0:15:45.14:0,45,881	0/1:11,0:15:99:177,0,260	0/0:6,0:6:15.05:0,15,200	0/0:23,0:22:39.08:0,39,542	0/0:14,0:14:20.82:0,21,196	0/0:52,0:52:99:0,124,1466	0/1:15,0:17:37.34:37,0,175	0/1:9,0:8:9.92:10,0,24	0/1:12,0:30:99:138,0,162	0/1:4,4:14:1.07:1,0,105	0/1:9,7:19:99:343,0,161	0/0:18,0:18:50.41:0,50,529	0/1:7,0:7:99:122,0,99
chr10	48456212	.	A	ACACACT	2862.53	PASS	AB=0.875;AC=26;AF=0.464;AN=56;BaseQRankSum=4.745;DP=629;FS=2.693;HRun=0;HaplotypeScore=179.0232;InbreedingCoeff=0.5038;MQ=48.09;MQ0=19;MQRankSum=-6.478;QD=8.65;ReadPosRankSum=-1.964;VQSLOD=2.4185;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:40:64.56:0,65,1039	0/0:6,0:6:18:0,18,207	0/0:19,0:7:11.96:0,12,127	0/0:29,0:13:23.86:0,24,323	1/1:23,0:21:2.72:24,3,0	0/0:20,0:22:63.03:0,63,786	0/0:19,0:20:50.99:0,51,701	1/1:36,0:33:44.92:462,45,0	0/0:15,0:16:45.07:0,45,706	1/1:22,0:21:31.39:372,31,0	0/1:13,0:11:0:1,0,0	0/1:7,15:26:14.63:173,0,15	0/1:15,9:23:51.94:351,0,52	1/1:21,0:21:6.20:43,6,0	0/0:25,0:27:62.73:0,63,863	0/0:17,0:18:53.85:0,54,756	1/1:13,0:14:17.30:162,17,0	1/1:7,0:6:8.99:85,9,0	0/1:23,0:22:10.25:10,0,31	0/0:21,0:22:5.10:0,5,212	0/0:51,0:51:19.42:0,19,593	1/1:19,0:18:2.63:224,3,0	0/1:17,0:15:12.47:238,0,12	0/1:33,2:35:30.70:356,0,31	1/1:21,0:21:4.37:39,4,0	1/1:22,0:20:31.55:313,32,0	0/0:22,0:23:12.94:0,13,291	1/1:7,0:5:15.05:204,15,0
chr10	48460474	.	GA	G	9987.79	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=16.053;DP=796;FS=0.565;HRun=2;HaplotypeScore=76.8686;InbreedingCoeff=0.9998;MQ=77.81;MQ0=0;MQRankSum=-1.853;QD=36.45;ReadPosRankSum=-1.313;VQSLOD=4.8060;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,117,1752	0/0:9,0:9:27.09:0,27,405	0/0:21,0:21:60.14:0,60,789	0/0:26,0:26:66.14:0,66,895	1/1:0,36:36:96.31:1246,96,0	0/0:22,0:22:63.21:0,63,944	0/0:40,0:40:99:0,120,1761	1/1:1,35:36:99:1309,102,0	0/0:28,0:28:84.27:0,84,1239	1/1:0,26:26:78.25:1013,78,0	1/1:0,10:10:30.10:383,30,0	0/0:33,0:33:96.32:0,96,1435	0/0:24,0:24:69.23:0,69,1030	1/1:0,32:32:93.30:1207,93,0	0/0:40,0:40:99:0,120,1778	0/0:37,0:37:99:0,105,1573	1/1:0,29:29:78.25:1013,78,0	1/1:0,16:16:45.15:584,45,0	0/0:22,0:22:66.22:0,66,971	0/0:31,0:31:93.31:0,93,1371	0/0:40,0:40:99:0,117,1704	0/0:24,0:24:69.23:0,69,1033	0/0:17,0:17:51.16:0,51,740	0/0:32,0:32:96.27:0,96,1395	1/1:2,28:30:78.25:1013,78,0	1/1:0,32:32:96.31:1246,96,0	0/0:37,0:36:99:0,108,1576	1/1:0,27:27:75.24:974,75,0
chr10	48462760	.	A	AG	7824.85	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-12.874;DP=737;FS=1.758;HRun=3;HaplotypeScore=71.2021;InbreedingCoeff=0.9989;MQ=88.73;MQ0=0;MQRankSum=-5.731;QD=35.57;ReadPosRankSum=0.749;VQSLOD=5.4579;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,114,1342	0/0:7,0:7:21.06:0,21,252	0/0:26,0:26:52:0,52,736	0/0:31,0:31:78.23:0,78,930	1/1:4,21:25:57.18:774,57,0	0/0:19,0:19:57.17:0,57,684	0/0:38,0:38:99:0,108,1283	1/1:6,18:24:54.17:737,54,0	0/0:36,0:36:99:0,105,1256	1/1:2,22:24:66.22:922,66,0	1/1:0,9:9:27.05:355,27,0	0/0:36,0:36:99:0,105,1246	0/0:34,0:34:99:0,99,1176	1/1:2,31:33:87.29:1218,87,0	0/0:39,0:39:99:0,111,1332	0/0:35,0:35:93.27:0,93,1104	1/1:2,30:32:78.26:1091,78,0	1/1:0,25:25:72.24:1008,72,0	0/0:19,0:19:54.12:0,54,632	0/0:15,0:15:39.12:0,39,468	0/0:42,0:42:99:0,120,1405	0/0:19,0:19:57.17:0,57,680	0/0:19,0:19:48.12:0,48,553	0/0:27,0:27:81.25:0,81,972	1/1:2,15:17:39.13:543,39,0	1/1:1,20:22:63.17:840,63,0	0/0:34,0:34:87.26:0,87,1043	1/1:0,9:9:24.08:336,24,0
chr10	48463161	.	CT	C	569.05	PASS	AB=0.760;AC=9;AF=0.167;AN=54;BaseQRankSum=4.875;DP=346;FS=3.776;HRun=1;HaplotypeScore=58.4795;InbreedingCoeff=0.0318;MQ=72.65;MQ0=29;MQRankSum=-2.887;QD=9.33;ReadPosRankSum=0.127;VQSLOD=1.0593;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:78.25:0,78,1206	0/0:4,0:4:9.03:0,9,144	0/0:34,0:15:19.11:0,19,329	0/0:55,0:21:31.50:0,31,453	0/1:5,3:6:32.67:75,0,33	0/0:4,0:4:12.03:0,12,168	0/0:24,0:22:47.99:0,48,879	0/1:8,4:10:71.25:87,0,71	0/0:3,0:3:6.02:0,6,96	0/0:1,0:1:3.01:0,3,45	./.	0/0:10,0:9:18.06:0,18,285	0/0:13,0:13:36.12:0,36,560	0/1:2,4:6:7.09:160,0,7	0/0:9,0:8:24.07:0,24,360	0/0:8,0:8:21.02:0,21,306	0/1:4,0:3:6.14:6,0,34	1/1:0,3:3:6.02:84,6,0	0/0:14,0:7:21.07:0,21,329	0/0:7,0:7:18.04:0,18,242	0/0:25,0:25:69:0,69,1038	0/0:13,0:12:24.08:0,24,371	0/0:14,0:14:36.12:0,36,565	0/0:14,0:14:42.10:0,42,640	0/1:5,3:7:29.84:30,0,67	0/1:10,3:11:19.65:192,0,20	0/0:5,0:5:15.04:0,15,200	0/1:4,3:6:43.03:71,0,43
chr10	48463162	.	T	TCCTC	1197.31	PASS	AB=0.933;AC=17;AF=0.315;AN=54;BaseQRankSum=4.078;DP=347;FS=1.516;HRun=0;HaplotypeScore=75.3216;InbreedingCoeff=0.7463;MQ=72.50;MQ0=29;MQRankSum=-4.899;QD=18.71;ReadPosRankSum=-1.873;VQSLOD=2.8678;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:72.22:0,72,1247	0/0:4,0:4:9.03:0,9,159	0/0:35,0:16:13.24:0,13,210	0/0:54,0:21:27.72:0,28,309	1/1:7,1:6:6.02:83,6,0	0/0:4,0:4:6.01:0,6,81	0/0:25,0:23:57.65:0,58,947	0/1:13,1:12:10.98:293,0,11	0/0:3,0:3:6.02:0,6,111	1/1:1,0:1:2.97:20,3,0	./.	0/0:9,0:8:18.06:0,18,326	0/0:12,0:12:33.11:0,33,562	1/1:6,1:7:17.88:220,18,0	0/0:10,0:9:24.07:0,24,398	0/0:9,0:9:21.07:0,21,391	1/1:2,2:3:3.01:80,3,0	1/1:3,0:3:5.95:42,6,0	0/0:14,0:7:18.06:0,18,291	0/0:6,0:6:12.04:0,12,206	0/0:25,0:25:60.15:0,60,927	0/0:12,0:11:24.08:0,24,393	0/0:13,0:13:33.11:0,33,606	0/0:14,0:14:36.12:0,36,653	1/1:8,0:7:9.01:107,9,0	1/1:11,1:10:23.77:371,24,0	0/0:5,0:5:12.04:0,12,182	1/1:7,0:6:12.04:163,12,0
chr10	48463458	.	AT	A	991.88	PASS	AB=0.851;AC=24;AF=0.429;AN=56;BaseQRankSum=-2.299;DP=481;FS=1.628;HRun=16;HaplotypeScore=88.1606;InbreedingCoeff=0.4033;MQ=65.36;MQ0=20;MQRankSum=0.788;QD=3.81;ReadPosRankSum=1.384;VQSLOD=1.0128;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,1:27:34.56:0,35,410	0/1:1,2:3:16.30:27,0,16	0/0:11,0:7:2.68:0,3,29	0/1:13,0:12:12.24:12,0,15	0/0:16,0:15:22.66:0,23,129	0/0:13,0:15:29.87:0,30,233	0/1:14,1:14:0.35:0,0,91	1/1:13,14:23:36.45:234,36,0	0/0:13,1:14:6.11:0,6,138	0/0:12,2:14:8.67:0,9,138	0/0:15,0:13:13.07:0,13,68	0/1:12,5:17:4.80:84,0,5	1/1:8,11:21:7.14:108,7,0	1/1:17,1:18:0.74:41,1,0	0/0:17,2:19:1.75:0,2,209	0/0:23,1:23:23.86:0,24,183	0/0:22,2:22:21.88:0,22,127	0/1:22,3:25:28.52:29,0,104	1/1:11,16:30:11.55:268,12,0	1/1:5,4:8:5.08:35,5,0	0/0:6,4:8:0:0,0,0	1/1:3,6:10:15.48:75,15,0	1/1:7,5:10:3.13:19,3,0	1/1:9,12:21:23.71:125,24,0	0/0:14,0:14:13.90:0,14,69	0/0:13,1:14:1.52:0,2,62	1/1:12,14:24:4.85:105,5,0	0/1:8,1:8:2.01:2,0,39
chr10	48463479	.	C	CTT	2978.55	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=8.044;DP=492;FS=4.682;HRun=7;HaplotypeScore=87.0135;InbreedingCoeff=0.8635;MQ=46.53;MQ0=30;MQRankSum=-4.132;QD=15.76;ReadPosRankSum=-0.542;VQSLOD=0.8550;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:33:69.03:0,69,738	0/0:2,0:2:6.02:0,6,70	0/0:5,0:2:2.68:0,3,11	0/1:2,0:2:0:0,0,0	1/1:5,11:14:17.98:263,18,0	0/0:12,0:12:27.04:0,27,291	0/0:17,0:16:33.06:0,33,364	1/1:15,0:26:39.19:145,39,0	0/0:18,0:18:26.74:0,27,304	1/1:8,15:22:41.26:640,41,0	1/1:5,7:11:20.73:240,21,0	0/0:22,0:22:47.81:0,48,550	0/0:23,0:23:37.33:0,37,446	1/1:7,8:14:9.03:147,9,0	0/0:21,0:20:29.92:0,30,328	0/0:20,0:19:45.07:0,45,497	1/1:9,17:22:33.11:540,33,0	1/1:12,12:24:2.65:440,3,0	0/0:31,0:29:54.06:0,54,596	0/0:7,0:6:9:0,9,105	0/0:8,0:6:6.01:0,6,70	0/0:13,0:12:18.03:0,18,209	0/0:15,0:12:23.59:0,24,275	0/0:27,0:24:39.04:0,39,419	1/1:3,9:12:18.90:268,19,0	1/1:6,7:13:24.07:371,24,0	0/0:24,0:21:29.53:0,30,337	1/1:6,5:11:9.91:129,10,0
chr10	48463775	.	GGT	G	10635.10	PASS	AB=0.917;AC=29;AF=0.518;AN=56;BaseQRankSum=15.314;DP=724;FS=2.223;HRun=0;HaplotypeScore=100.8655;InbreedingCoeff=0.9277;MQ=64.31;MQ0=7;MQRankSum=-1.757;QD=26.32;ReadPosRankSum=2.620;VQSLOD=5.9246;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,1:24:17.24:0,17,795	0/0:15,0:15:39.13:0,39,633	0/0:49,0:24:36.02:0,36,539	0/0:32,1:18:20.57:0,21,260	1/1:4,29:34:81.09:974,81,0	0/0:25,0:25:72.25:0,72,1175	0/0:12,0:12:30.10:0,30,489	1/1:11,28:39:52.68:998,53,0	0/1:20,2:22:13.56:14,0,821	1/1:3,24:27:72.18:858,72,0	1/1:3,15:17:42.13:517,42,0	0/0:22,0:22:60.20:0,60,975	0/0:18,1:19:17.23:0,17,770	1/1:5,20:26:50.99:605,51,0	0/0:20,1:21:23.27:0,23,893	0/0:22,0:22:63.20:0,63,1004	1/1:4,23:29:65.87:767,66,0	1/1:7,21:28:29.95:669,30,0	1/1:3,12:15:36.11:442,36,0	1/1:2,20:22:54.17:665,54,0	1/1:3,24:28:57.01:679,57,0	0/0:33,0:33:90.31:0,90,1452	0/0:27,0:27:72.22:0,72,1113	0/0:18,0:18:48.16:0,48,777	1/1:6,24:30:57.18:702,57,0	1/1:3,32:35:96.30:1182,96,0	1/1:3,23:26:66.21:812,66,0	1/1:2,22:25:63.03:753,63,0
chr10	48464291	.	G	GA	253.59	PASS	AC=14;AF=0.280;AN=50;BaseQRankSum=3.750;DP=339;FS=8.768;HRun=0;HaplotypeScore=38.6328;InbreedingCoeff=0.8179;MQ=67.81;MQ0=5;MQRankSum=0.322;QD=13.35;ReadPosRankSum=-5.067;VQSLOD=2.1631;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:81.27:0,81,1132	0/0:6,0:6:18.06:0,18,249	0/0:9,0:7:21.07:0,21,292	0/0:16,0:11:33.10:0,33,439	1/1:3,0:3:6.02:76,6,0	0/0:18,0:18:51.17:0,51,711	0/0:28,0:28:78.07:0,78,981	1/1:2,0:2:6:54,6,0	0/0:16,0:16:45.12:0,45,607	1/1:0,3:3:6.01:69,6,0	./.	0/0:15,0:15:45.14:0,45,611	0/0:27,0:27:81.26:0,81,1111	1/1:0,3:3:6.02:72,6,0	0/0:24,0:24:69.23:0,69,965	0/0:18,0:18:54.18:0,54,753	1/1:1,3:3:3.01:46,3,0	./.	0/0:17,0:16:48.16:0,48,670	0/0:12,0:12:33.11:0,33,461	0/0:29,0:29:87.28:0,87,1200	0/0:11,0:11:33.11:0,33,453	0/0:11,0:10:30.08:0,30,389	0/0:13,0:13:39.13:0,39,545	1/1:2,0:2:3:29,3,0	1/1:2,0:2:6.01:62,6,0	0/0:20,0:20:51.17:0,51,713	./.
chr10	48465194	.	A	AT	8649.71	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=8.472;DP=604;FS=4.258;HRun=6;HaplotypeScore=85.0365;InbreedingCoeff=0.9940;MQ=70.72;MQ0=1;MQRankSum=-2.146;QD=32.28;ReadPosRankSum=1.435;VQSLOD=5.0190;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:57.10:0,57,571	0/0:13,0:13:36.07:0,36,362	0/0:23,0:22:60.13:0,60,610	0/0:7,0:7:14.32:0,14,110	1/1:6,27:34:90.27:1118,90,0	0/0:24,0:24:63.13:0,63,638	0/0:12,0:12:27.06:0,27,275	1/1:6,40:47:99:1453,123,0	0/0:7,0:7:21.05:0,21,214	1/1:3,23:26:69.21:854,69,0	1/1:4,20:24:60.19:755,60,0	0/0:20,0:20:57.09:0,57,570	0/0:19,0:19:45.10:0,45,459	1/1:3,18:21:51.16:641,51,0	0/0:21,0:21:54.12:0,54,551	0/0:17,0:16:45.10:0,45,459	1/1:1,30:31:78.25:981,78,0	1/1:1,21:22:63.20:790,63,0	0/0:24,0:24:57.11:0,57,576	0/0:32,0:31:93.13:0,93,935	0/0:5,0:5:15.03:0,15,153	0/0:18,0:18:54.12:0,54,551	0/0:23,0:23:66.13:0,66,666	0/0:13,0:13:36.08:0,36,367	1/1:1,29:29:84.23:1039,84,0	1/1:5,17:22:51.16:642,51,0	0/0:34,0:34:99:0,99,1010	1/1:1,10:11:30.10:377,30,0
chr10	48466253	.	G	GTTTTTTTT	8512.41	PASS	AB=0.618;AC=21;AF=0.375;AN=56;BaseQRankSum=7.214;DP=585;FS=0.000;HRun=10;HaplotypeScore=158.5797;InbreedingCoeff=0.8754;MQ=68.26;MQ0=1;MQRankSum=-8.257;QD=35.03;ReadPosRankSum=-6.389;VQSLOD=0.0407;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,118,2476	0/0:7,0:7:18.01:0,18,392	0/0:20,0:13:2.24:0,2,212	0/0:19,0:16:20.89:0,21,305	1/1:13,2:33:60.05:1373,60,0	0/0:16,0:17:28.47:0,28,756	0/0:20,0:21:54.05:0,54,1158	1/1:7,0:23:56.82:658,57,0	0/0:23,0:25:63.03:0,63,1222	1/1:8,16:26:54.10:1264,54,0	1/1:11,2:29:57.08:1344,57,0	0/0:17,0:17:38.87:0,39,809	0/0:14,0:14:29.81:0,30,590	1/1:5,12:18:12.04:443,12,0	0/0:13,0:14:39.03:0,39,690	0/0:29,0:29:74.94:0,75,1560	1/1:12,1:26:23.77:853,24,0	1/1:5,10:15:9.03:368,9,0	0/1:8,0:21:35.75:36,0,200	0/0:4,0:25:26.72:0,27,490	0/0:3,0:16:31.85:0,32,253	0/0:14,0:15:23.58:0,24,397	0/0:16,0:16:45.04:0,45,939	0/0:21,0:21:57.05:0,57,1181	1/1:16,2:21:48.05:974,48,0	1/1:11,0:22:54.15:956,54,0	0/0:3,0:17:37.80:0,38,307	1/1:6,0:6:12.04:244,12,0
chr10	48467149	.	GA	G	3742.27	PASS	AB=0.712;AC=10;AF=0.179;AN=56;BaseQRankSum=3.927;DP=642;FS=3.969;HRun=1;HaplotypeScore=83.5245;InbreedingCoeff=-0.2183;MQ=75.82;MQ0=0;MQRankSum=-10.667;QD=12.43;ReadPosRankSum=-1.076;VQSLOD=1.9578;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:45.15:0,45,719	0/0:10,0:10:30.10:0,30,480	0/0:17,0:17:50.75:0,51,737	0/0:19,0:19:30.63:0,31,665	0/1:30,17:47:99:522,0,1224	0/0:28,0:28:84.29:0,84,1337	0/0:13,0:13:39.12:0,39,599	0/1:37,18:55:99:570,0,1572	0/0:18,0:18:54.17:0,54,839	0/1:14,12:25:99:359,0,549	0/1:23,10:33:99:319,0,955	0/0:19,0:19:57.19:0,57,908	0/0:17,0:17:51.17:0,51,815	0/1:11,13:24:99:424,0,456	0/0:21,0:21:63.21:0,63,1007	0/0:34,0:34:99:0,99,1578	0/1:9,3:12:53.39:53,0,350	0/1:11,10:21:99:219,0,428	0/0:21,0:21:63.21:0,63,985	0/0:22,0:22:63.21:0,63,1007	0/0:19,0:19:57.17:0,57,884	0/0:13,0:13:39.13:0,39,623	0/0:19,0:19:57.19:0,57,909	0/0:5,0:5:15.05:0,15,235	0/1:7,20:27:99:667,0,260	0/1:30,15:45:99:476,0,1299	0/0:31,0:30:93.32:0,93,1478	0/1:7,4:11:99:134,0,302
chr10	48467567	.	G	GT	10449.19	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-6.238;DP=598;FS=3.119;HRun=6;HaplotypeScore=60.8548;InbreedingCoeff=0.9995;MQ=78.40;MQ0=0;MQRankSum=-4.878;QD=32.05;ReadPosRankSum=0.996;VQSLOD=5.3254;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:30.01:0,30,288	0/0:10,0:10:30.07:0,30,306	0/0:18,0:18:46.90:0,47,456	0/0:19,0:19:48.02:0,48,472	1/1:4,25:29:69.22:868,69,0	0/0:36,0:36:99:0,108,1094	0/0:22,0:22:57.13:0,57,581	1/1:2,25:27:75.21:914,75,0	0/0:23,0:23:69.16:0,69,704	1/1:1,30:31:87.28:1095,87,0	1/1:5,26:31:72.23:906,72,0	0/0:23,0:23:63.08:0,63,630	0/0:15,0:15:42.10:0,42,429	1/1:3,15:18:42.13:528,42,0	0/0:23,0:23:66.15:0,66,673	0/0:19,0:19:54.10:0,54,542	1/1:1,16:17:45.14:566,45,0	1/1:1,14:15:39.12:491,39,0	1/1:1,14:15:42.13:528,42,0	1/1:4,27:31:78.25:981,78,0	1/1:0,17:17:39.12:491,39,0	0/0:14,0:14:42.08:0,42,421	0/0:23,0:23:66.15:0,66,672	0/0:13,0:13:39.09:0,39,398	1/1:3,21:24:54.17:679,54,0	1/1:1,30:31:90.28:1120,90,0	1/1:2,29:31:78.25:981,78,0	1/1:0,9:9:24.08:302,24,0
chr10	48467836	.	CT	C	477.60	PASS	AB=0.814;AC=11;AF=0.196;AN=56;BaseQRankSum=0.331;DP=560;FS=7.526;HRun=15;HaplotypeScore=90.5748;InbreedingCoeff=0.4134;MQ=71.55;MQ0=3;MQRankSum=-1.868;QD=3.41;ReadPosRankSum=3.220;VQSLOD=0.5757;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:11,0:12:2.01:2,0,108	0/0:7,0:7:18:0,18,158	0/0:25,1:14:9.37:0,9,110	0/0:12,0:9:9.56:0,10,57	0/0:12,0:28:53.33:0,53,320	0/0:26,3:29:11.51:0,12,207	0/1:7,3:10:15.21:15,0,102	0/0:15,0:24:43.64:0,44,259	0/1:17,2:19:0.86:1,0,106	0/0:22,0:28:53.98:0,54,323	0/0:10,0:24:46.59:0,47,273	0/0:16,1:17:4.63:0,5,155	0/0:18,0:18:38.64:0,39,310	0/0:10,0:25:22.36:0,22,117	0/0:27,1:28:1.18:0,1,329	0/0:20,2:24:47.73:0,48,394	0/0:8,0:19:15.59:0,16,105	0/0:9,0:21:10.32:0,10,82	1/1:18,6:29:45.54:256,46,0	1/1:6,13:20:15.99:87,16,0	1/1:6,6:12:14.70:96,15,0	0/0:16,2:18:16.52:0,17,231	0/0:14,0:14:8.70:0,9,73	0/1:10,2:12:5.06:5,0,189	0/0:3,0:11:9.55:0,10,52	0/0:18,0:35:61.38:0,61,391	0/1:9,14:25:13.21:164,0,13	0/0:7,0:11:14.69:0,15,95
chr10	48468537	.	GTT	G	5486.62	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=5.908;DP=511;FS=5.659;HRun=13;HaplotypeScore=71.8597;InbreedingCoeff=0.9862;MQ=78.07;MQ0=6;MQRankSum=0.456;QD=21.10;ReadPosRankSum=2.198;VQSLOD=4.5160;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:24:62.13:0,62,765	0/0:8,0:9:21.07:0,21,289	0/0:29,0:18:17.09:0,17,126	0/0:33,0:20:11.82:0,12,169	1/1:3,20:22:60.08:578,60,0	0/0:14,0:14:42.12:0,42,574	0/0:15,0:15:42.13:0,42,580	1/1:3,15:19:35.92:399,36,0	0/0:15,0:16:44.61:0,45,571	1/1:5,15:20:48:454,48,0	1/1:2,9:11:21.05:225,21,0	0/0:8,0:8:24.08:0,24,347	0/0:22,0:22:63.13:0,63,852	1/1:2,15:17:45.06:436,45,0	0/0:18,0:19:45.10:0,45,578	0/0:18,0:18:42.12:0,42,586	1/1:2,15:17:39.05:378,39,0	1/1:1,13:13:27.03:262,27,0	1/1:5,8:16:11.43:198,11,0	1/1:5,14:21:35.96:380,36,0	1/1:2,13:15:33.04:320,33,0	0/0:13,0:14:17.85:0,18,355	0/0:18,0:18:48.14:0,48,676	0/0:8,0:10:23.57:0,24,306	1/1:1,16:17:42.04:407,42,0	1/1:6,24:29:69.05:662,69,0	1/1:0,20:21:50.40:477,50,0	1/1:4,14:19:26.97:310,27,0
chr10	48468549	.	TTA	T	441.61	PASS	AB=0.986;AC=16;AF=0.286;AN=56;BaseQRankSum=13.896;DP=504;FS=2.376;HRun=0;HaplotypeScore=86.0321;InbreedingCoeff=0.1975;MQ=66.83;MQ0=8;MQRankSum=1.831;QD=1.80;ReadPosRankSum=6.280;VQSLOD=1.2161;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:68.63:0,69,871	0/0:7,0:7:21.07:0,21,304	0/0:23,0:9:13.97:0,14,103	0/0:29,0:16:20.98:0,21,214	0/1:26,0:25:64.99:78,0,65	0/0:14,0:14:39.08:0,39,595	0/0:16,0:16:45.01:0,45,629	0/0:25,0:25:2.41:0,2,203	0/0:17,0:17:47.94:0,48,586	0/1:18,0:18:5.79:24,0,6	0/1:12,0:12:12.80:13,0,35	0/0:9,0:9:27.06:0,27,372	0/0:23,0:23:69.15:0,69,1002	1/1:16,1:17:6.78:80,7,0	0/0:17,0:18:50.71:0,51,648	0/0:14,0:14:42.13:0,42,635	1/1:18,0:18:5.05:58,5,0	1/1:13,0:12:16.71:50,17,0	0/1:15,0:14:6.24:6,0,105	0/1:17,1:18:26.62:61,0,27	0/1:14,0:14:0.95:45,0,1	0/0:10,0:10:27.30:0,27,380	0/0:18,0:18:51.11:0,51,762	0/0:12,0:12:32.90:0,33,393	0/1:19,1:20:38.44:66,0,38	0/1:25,0:24:0.21:32,0,0	0/1:27,0:27:39.40:39,0,62	0/1:22,1:23:53.60:54,0,96
chr10	48468805	.	A	ATTT	6780.56	PASS	AB=0.556;AC=25;AF=0.446;AN=56;BaseQRankSum=0.786;DP=501;FS=9.384;HRun=11;HaplotypeScore=83.8906;InbreedingCoeff=0.7448;MQ=67.74;MQ0=2;MQRankSum=-1.642;QD=24.39;ReadPosRankSum=-3.586;VQSLOD=2.3353;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:81.18:0,81,946	0/0:4,0:4:12.04:0,12,140	0/0:10,0:10:23.43:0,23,211	0/0:16,0:14:16.36:0,16,177	1/1:8,12:21:45.09:699,45,0	0/0:28,0:28:75.19:0,75,877	0/0:18,0:19:1.52:0,2,355	1/1:27,3:36:60.19:924,60,0	0/0:14,0:15:42:0,42,462	1/1:6,13:19:45.12:756,45,0	1/1:4,12:17:39.09:653,39,0	0/0:7,0:7:18.04:0,18,210	0/0:25,0:25:69.20:0,69,806	1/1:5,5:12:18.06:307,18,0	0/0:18,0:18:39.05:0,39,456	0/0:11,0:12:23.94:0,24,253	1/1:11,11:24:69.20:1109,69,0	1/1:2,17:21:36.08:610,36,0	0/1:4,0:16:16.29:31,0,16	0/1:4,0:17:42.66:63,0,43	1/1:2,0:19:13.67:33,14,0	0/0:7,0:7:15.01:0,15,175	0/0:13,0:13:27:0,27,315	0/0:16,0:18:50.99:0,51,561	1/1:4,7:12:21.05:343,21,0	1/1:4,15:21:48.12:787,48,0	0/1:2,0:17:14.31:14,0,17	1/1:4,13:21:24.08:452,24,0
chr10	48468977	.	C	CT	5062.62	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-1.380;DP=500;FS=18.257;HRun=9;HaplotypeScore=68.3016;InbreedingCoeff=0.9887;MQ=77.72;MQ0=1;MQRankSum=-0.593;QD=25.44;ReadPosRankSum=-1.371;VQSLOD=3.3359;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:80.91:0,81,699	0/0:8,0:8:17.99:0,18,156	0/0:9,0:9:14.98:0,15,130	0/0:14,0:15:20.02:0,20,162	1/1:1,13:14:39.06:418,39,0	0/0:24,0:24:59.96:0,60,521	0/0:13,0:13:32.82:0,33,274	1/1:6,33:39:53.17:1043,53,0	0/0:19,0:20:53.02:0,53,449	1/1:2,22:24:60.14:647,60,0	1/1:0,8:8:24.06:265,24,0	0/0:12,0:12:32.98:0,33,286	0/0:16,0:16:35.98:0,36,313	1/1:3,13:17:44.95:470,45,0	0/0:21,0:21:56.97:0,57,491	0/0:19,0:19:53.99:0,54,469	1/1:2,15:17:13.05:372,13,0	1/1:2,16:18:22.11:472,22,0	0/0:4,0:24:35.56:0,36,112	0/0:0,0:13:26.48:0,26,77	0/0:1,0:11:20.37:0,20,60	0/0:14,0:14:38.99:0,39,339	0/0:15,0:15:35.96:0,36,308	0/0:6,0:8:20.03:0,20,162	1/1:4,17:21:22.10:472,22,0	1/1:1,19:20:31.10:571,31,0	0/0:1,0:22:38.70:0,39,114	1/1:8,13:21:30.08:332,30,0
chr10	48469416	.	A	ACC	2378.05	PASS	AB=0.568;AC=30;AF=0.556;AN=54;BaseQRankSum=1.742;DP=430;FS=11.716;HRun=9;HaplotypeScore=71.5391;InbreedingCoeff=0.5953;MQ=73.77;MQ0=1;MQRankSum=-0.471;QD=10.66;ReadPosRankSum=0.508;VQSLOD=0.2976;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:84.16:0,84,892	0/0:3,0:3:9.02:0,9,93	0/0:17,0:15:28.73:0,29,271	0/0:20,0:16:27.82:0,28,332	1/1:4,5:10:2.49:9,2,0	0/0:11,0:11:33:0,33,336	0/0:35,0:35:93.20:0,93,989	0/0:15,0:16:23.83:0,24,255	0/0:18,0:18:48.09:0,48,511	1/1:6,10:17:35.59:485,36,0	1/1:4,8:13:14.54:193,15,0	1/1:2,7:10:9.03:138,9,0	1/1:6,7:14:17.53:211,18,0	1/1:2,3:5:3.90:48,4,0	0/0:26,0:26:63.11:0,63,669	0/0:28,0:28:73.70:0,74,763	0/1:5,0:13:24.58:25,0,45	1/1:4,11:16:17.55:239,18,0	0/1:2,0:11:6.47:52,0,6	1/1:1,0:6:9.98:34,10,0	0/1:4,0:20:10.99:50,0,11	1/1:6,13:20:32.49:439,32,0	1/1:1,0:6:2.12:8,2,0	1/1:2,15:22:28.04:312,28,0	1/1:1,5:7:3:26,3,0	1/1:7,7:15:17.55:240,18,0	0/1:3,0:18:27.96:67,0,28	./.
chr10	48469908	.	T	TG	14712.17	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=4.478;DP=686;FS=1.237;HRun=2;HaplotypeScore=84.6973;InbreedingCoeff=0.9998;MQ=85.07;MQ0=0;MQRankSum=-3.375;QD=40.09;ReadPosRankSum=0.062;VQSLOD=4.9871;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:96.30:0,96,1190	0/0:15,0:15:39.12:0,39,484	0/0:20,0:20:60.18:0,60,735	0/0:22,0:22:54.16:0,54,653	1/1:0,22:22:60.20:863,60,0	0/0:13,0:13:39.12:0,39,484	0/0:15,0:15:45.14:0,45,558	1/1:0,34:34:99:1451,102,0	0/0:21,0:21:63.20:0,63,781	1/1:4,37:41:99:1599,111,0	1/1:1,24:25:69.19:968,69,0	0/0:28,0:28:81.25:0,81,1004	0/0:26,0:26:75.24:0,75,929	1/1:0,25:25:72.24:1037,72,0	0/0:34,0:34:96.30:0,96,1190	0/0:28,0:28:84.26:0,84,1042	1/1:0,24:24:69.23:994,69,0	1/1:3,24:27:75.21:1057,75,0	1/1:2,14:17:45.13:628,45,0	1/1:0,22:23:63.21:892,63,0	1/1:1,39:40:99:1641,114,0	0/0:18,0:18:54.15:0,54,656	0/0:23,0:23:63.20:0,63,781	0/0:21,0:21:63.18:0,63,768	1/1:3,22:25:63.21:907,63,0	1/1:1,26:27:78.26:1121,78,0	1/1:1,26:28:81.27:1165,81,0	1/1:0,9:9:27.09:389,27,0
chr10	48470524	.	GT	G	367.43	PASS	AB=0.856;AC=9;AF=0.161;AN=56;BaseQRankSum=2.569;DP=332;FS=1.803;HRun=15;HaplotypeScore=40.5214;InbreedingCoeff=0.4709;MQ=60.97;MQ0=4;MQRankSum=1.485;QD=4.90;ReadPosRankSum=0.932;VQSLOD=1.0830;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,2:27:25.78:0,26,317	0/0:6,0:6:9:0,9,79	0/0:7,0:5:0:0,0,0	0/0:5,0:4:3.47:0,3,28	0/0:14,0:14:0.47:0,0,1	0/0:17,2:19:16.65:0,17,256	0/0:8,0:8:9:0,9,79	0/0:13,0:12:0:0,0,0	0/0:9,0:9:17.92:0,18,142	0/0:28,0:28:0.47:0,0,2	0/0:7,0:7:0.47:0,0,1	0/0:13,0:11:14.57:0,15,97	0/0:14,1:15:10.46:0,10,184	0/0:18,0:18:0.47:0,0,1	0/1:12,1:15:6.80:7,0,135	0/0:14,0:13:30:0,30,264	0/1:16,0:15:0:0,0,0	0/0:7,0:6:0:0,0,0	1/1:7,8:15:21.61:124,22,0	1/1:2,11:13:32.44:207,32,0	1/1:0,4:4:8.87:58,9,0	0/0:5,0:6:6:0,6,53	0/0:9,1:10:2.14:0,2,129	0/0:4,0:3:6:0,6,53	0/0:8,0:8:0:0,0,0	0/0:14,0:14:0:0,0,0	0/1:5,6:12:3.63:98,0,4	0/0:5,0:5:0:0,0,0
chr10	48471837	.	TC	T	7260.10	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=11.113;DP=457;FS=26.120;HRun=3;HaplotypeScore=44.7494;InbreedingCoeff=0.9905;MQ=79.18;MQ0=0;MQRankSum=-2.714;QD=34.41;ReadPosRankSum=0.684;VQSLOD=2.7099;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:39.13:0,39,562	0/0:3,0:3:9.03:0,9,130	0/0:12,0:11:30.06:0,30,398	0/0:13,0:13:39.09:0,39,527	1/1:1,29:30:78.24:967,78,0	0/0:18,0:18:54.18:0,54,778	0/0:9,0:9:27.09:0,27,389	1/1:2,26:28:78.25:967,78,0	0/0:11,0:11:33.10:0,33,452	1/1:0,18:18:54.17:669,54,0	1/1:0,22:22:63.20:781,63,0	0/0:13,0:13:39.13:0,39,561	0/0:14,0:14:42.14:0,42,605	1/1:0,18:18:48.15:595,48,0	0/0:14,0:14:42.14:0,42,604	0/0:12,0:12:36.12:0,36,518	1/1:0,11:11:33.10:409,33,0	1/1:2,19:21:51.16:632,51,0	0/0:15,0:15:45.14:0,45,631	0/0:19,0:19:57.18:0,57,797	0/0:10,0:10:30.10:0,30,432	0/0:10,0:10:30.10:0,30,432	0/0:13,0:13:39.13:0,39,561	0/0:9,0:9:23.88:0,24,345	1/1:0,19:19:57.18:707,57,0	1/1:1,20:21:57.14:679,57,0	0/0:37,0:37:99:0,111,1592	1/1:0,23:23:69.22:855,69,0
chr10	48472168	.	T	TACAC	2634.20	PASS	AB=0.535;AC=19;AF=0.339;AN=56;BaseQRankSum=14.447;DP=725;FS=4.355;HRun=0;HaplotypeScore=161.2256;InbreedingCoeff=0.9046;MQ=60.14;MQ0=1;MQRankSum=2.069;QD=10.33;ReadPosRankSum=-0.687;VQSLOD=3.0990;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,100,1655	0/0:12,0:12:30.10:0,30,517	0/0:40,0:28:38.31:0,38,559	0/0:34,0:27:43.33:0,43,564	1/1:3,0:28:3.37:234,3,0	0/0:30,0:31:75.15:0,75,1120	0/0:22,0:22:39.13:0,39,673	1/1:8,19:26:53.99:822,54,0	0/0:21,0:21:57.53:0,58,890	1/1:4,0:24:55.61:273,56,0	0/1:3,0:23:7.40:145,0,7	0/0:25,0:25:66.17:0,66,1104	0/0:29,0:29:72.16:0,72,1075	1/1:3,0:23:52.91:238,53,0	0/0:26,0:26:69.17:0,69,1123	0/0:22,0:22:60.20:0,60,1022	1/1:2,0:30:61.80:288,62,0	1/1:4,0:32:35.06:230,35,0	0/0:18,0:18:42.10:0,42,640	0/0:22,0:22:57.15:0,57,951	0/0:33,0:33:75.19:0,75,1171	0/0:21,0:21:54.17:0,54,896	0/0:23,0:23:66.20:0,66,1076	0/0:33,0:33:73.28:0,73,1502	1/1:3,0:23:49.12:220,49,0	1/1:6,0:32:63.98:322,64,0	0/0:18,0:18:45.10:0,45,683	1/1:2,0:12:15.33:74,15,0
chr10	48472835	.	C	CAATT	9784.67	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-10.475;DP=422;FS=1.907;HRun=0;HaplotypeScore=61.2004;InbreedingCoeff=0.9868;MQ=78.20;MQ0=0;MQRankSum=-3.093;QD=64.37;ReadPosRankSum=-0.831;VQSLOD=5.9026;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:90.27:0,90,1604	0/0:5,0:5:15.05:0,15,280	0/0:19,0:19:9.37:0,9,797	0/0:11,0:11:30:0,30,508	1/1:3,10:13:27.09:645,27,0	0/0:16,0:16:48.16:0,48,896	0/0:20,0:20:60.21:0,60,1112	1/1:6,14:22:63.19:1499,63,0	0/0:9,0:9:24.08:0,24,448	1/1:1,13:14:42.12:1054,42,0	1/1:4,18:22:51.05:1156,51,0	0/0:12,0:12:30.08:0,30,490	0/0:14,0:14:42.14:0,42,777	1/1:3,12:15:36.12:931,36,0	0/0:18,0:18:51.16:0,51,921	0/0:12,0:12:33.11:0,33,610	1/1:0,12:11:30.10:799,30,0	1/1:1,17:18:42.14:1120,42,0	0/0:24,0:24:66.23:0,66,1232	0/0:16,0:16:45.11:0,45,743	0/0:15,0:15:42.13:0,42,752	0/0:9,0:9:24.08:0,24,441	0/0:11,0:11:30.10:0,30,560	0/0:8,0:8:18.05:0,18,305	1/1:0,10:10:27.09:720,27,0	1/1:2,15:17:48.12:1220,48,0	0/0:18,0:18:48.15:0,48,865	1/1:1,7:8:24.08:640,24,0
chr10	48473000	.	G	GTT	1638.30	PASS	AB=1.000;AC=24;AF=0.429;AN=56;BaseQRankSum=5.702;DP=591;FS=6.358;HRun=14;HaplotypeScore=97.2902;InbreedingCoeff=0.6270;MQ=67.50;MQ0=15;MQRankSum=-1.881;QD=7.00;ReadPosRankSum=-0.133;VQSLOD=1.0787;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:35:62.79:0,63,514	0/0:3,0:4:8.69:0,9,55	0/0:48,0:13:7.79:0,8,41	0/0:56,0:25:1.44:0,1,67	1/1:15,0:15:16.66:98,17,0	0/0:20,0:22:29.21:0,29,295	0/0:17,0:17:38.52:0,39,300	0/0:20,0:32:40.99:0,41,181	0/0:16,0:16:22.04:0,22,187	1/1:13,0:15:0.10:27,0,0	0/1:12,0:14:11.57:39,0,12	0/0:15,0:15:24.96:0,25,168	0/0:28,0:30:34.91:0,35,354	1/1:11,0:14:10.48:126,10,0	0/0:21,0:24:25.63:0,26,387	0/0:30,0:30:40.99:0,41,428	1/1:17,0:19:12.47:147,12,0	0/1:16,0:18:16.22:40,0,16	1/1:18,11:30:41.23:427,41,0	1/1:6,15:22:34.46:324,34,0	1/1:3,6:9:10.07:91,10,0	0/1:8,0:8:8.38:8,0,64	0/0:14,0:14:17.31:0,17,134	0/0:10,0:11:20.29:0,20,189	1/1:16,0:17:21.03:150,21,0	1/1:14,0:15:2.29:35,2,0	1/1:12,2:25:30.39:321,30,0	0/1:4,0:9:2.24:2,0,3
chr10	48473011	.	T	TTC	1777.69	PASS	AB=0.965;AC=19;AF=0.339;AN=56;BaseQRankSum=8.000;DP=587;FS=4.433;HRun=0;HaplotypeScore=101.8440;InbreedingCoeff=0.4281;MQ=67.43;MQ0=17;MQRankSum=-1.293;QD=7.90;ReadPosRankSum=1.688;VQSLOD=3.2937;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:92.69:0,93,1054	0/0:4,0:4:12.01:0,12,129	0/0:55,0:15:19.32:0,19,166	0/0:62,0:26:17.07:0,17,238	1/1:10,5:15:33.13:275,33,0	0/0:23,0:23:68.89:0,69,742	0/0:17,0:17:45.12:0,45,560	0/0:32,0:31:53.44:0,53,485	0/0:13,0:13:37.34:0,37,438	1/1:10,1:12:24.39:181,24,0	1/1:13,3:17:1.97:155,2,0	0/0:13,0:13:38.91:0,39,428	0/0:28,0:28:74.76:0,75,841	1/1:13,3:15:23.12:247,23,0	0/0:25,0:25:73.45:0,73,828	0/0:28,0:28:73.93:0,74,861	1/1:23,2:25:28.22:376,28,0	0/1:19,1:20:53.92:116,0,54	0/1:22,0:22:43.77:44,0,116	0/1:22,0:22:40.92:41,0,90	0/1:10,0:10:16.79:17,0,48	0/0:7,0:7:20.05:0,20,202	0/0:11,0:11:24.06:0,24,291	0/0:11,0:11:32.93:0,33,365	0/1:13,3:16:2.15:287,0,2	0/1:12,0:12:23.05:125,0,23	0/1:27,0:26:40.70:41,0,170	1/1:7,0:8:10.74:62,11,0
chr10	48473013	.	TTC	T	613.73	PASS	AB=0.987;AC=17;AF=0.304;AN=56;BaseQRankSum=5.471;DP=580;FS=12.524;HRun=0;HaplotypeScore=100.0786;InbreedingCoeff=0.0992;MQ=67.58;MQ0=16;MQRankSum=0.621;QD=2.24;ReadPosRankSum=-1.985;VQSLOD=1.0878;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:66.78:0,67,972	0/0:4,0:4:11.85:0,12,105	0/1:53,0:15:3.79:4,0,102	0/0:60,0:25:17.16:0,17,169	1/1:16,0:15:27.47:138,27,0	0/0:22,0:22:26.96:0,27,563	0/0:17,0:17:47.14:0,47,543	0/0:30,1:30:13.68:0,14,390	0/0:13,0:13:20.24:0,20,362	0/1:11,0:11:43.56:45,0,44	0/1:17,0:17:38.66:39,0,75	0/0:13,0:13:32.55:0,33,336	0/0:28,0:28:30.09:0,30,669	0/1:17,0:16:6.27:33,0,6	0/0:25,0:25:69.23:0,69,808	0/0:27,0:27:47.63:0,48,793	0/1:26,0:25:26.14:26,0,45	0/1:20,0:19:30.66:31,0,60	0/1:21,1:22:99:155,0,193	0/1:22,0:22:60.65:61,0,198	0/0:9,0:9:16.22:0,16,128	0/1:7,0:7:2.84:3,0,154	0/0:10,0:10:19.93:0,20,202	0/0:12,0:12:34.20:0,34,375	1/1:17,0:17:24.77:154,25,0	0/1:12,0:12:37.82:38,0,63	0/1:24,3:26:30.62:31,0,248	1/1:7,0:7:7.16:29,7,0
chr10	48473017	.	TTC	T	1542.46	PASS	AB=0.843;AC=12;AF=0.214;AN=56;BaseQRankSum=9.046;DP=570;FS=43.671;HRun=0;HaplotypeScore=96.4717;InbreedingCoeff=0.2212;MQ=66.51;MQ0=14;MQRankSum=-1.033;QD=9.46;ReadPosRankSum=-2.760;VQSLOD=0.8419;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:76.13:0,76,1236	0/0:4,0:4:12.04:0,12,199	0/0:48,0:14:22.82:0,23,237	0/0:56,0:23:18.06:0,18,272	1/1:11,4:14:1.73:169,2,0	0/0:23,0:23:27.93:0,28,732	0/0:16,0:16:40.89:0,41,569	0/0:31,0:30:45.56:0,46,557	0/0:14,0:14:17.81:0,18,451	0/1:8,3:11:3.54:156,0,4	0/1:10,7:17:8.14:243,0,8	0/0:15,0:15:20.81:0,21,436	0/0:29,0:29:47.06:0,47,838	0/1:11,9:19:5.72:156,0,6	0/0:26,0:25:67.07:0,67,1130	0/0:25,0:25:68.86:0,69,985	0/1:22,3:24:5.97:312,0,6	0/1:17,3:19:99:141,0,114	0/1:21,0:21:10.95:11,0,441	0/0:21,0:21:7.58:0,8,450	0/0:9,0:9:18.03:0,18,256	0/0:7,0:7:15.92:0,16,242	0/0:8,0:8:17.61:0,18,157	0/0:13,0:13:30.85:0,31,428	1/1:14,3:17:23.80:294,24,0	0/1:13,0:13:37.15:156,0,37	0/0:29,0:28:11.62:0,12,558	0/1:3,1:4:8.21:58,0,8
chr10	48473474	.	AAC	A	440.22	PASS	AB=0.942;AC=29;AF=0.630;AN=46;BaseQRankSum=5.549;DP=700;FS=3.158;HRun=0;HaplotypeScore=155.6801;InbreedingCoeff=0.4036;MQ=53.91;MQ0=24;MQRankSum=-4.140;QD=1.06;ReadPosRankSum=1.863;VQSLOD=2.8445;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:36:13.29:0,13,121	0/0:7,0:7:6.28:0,6,35	./.	./.	1/1:30,0:30:2.70:14,3,0	0/0:17,0:18:15.01:0,15,158	0/1:31,4:36:61.57:62,0,195	./.	0/0:13,0:19:6:0,6,51	1/1:29,0:29:14.68:70,15,0	1/1:28,0:28:5.68:28,6,0	0/1:23,3:26:29.61:69,0,30	0/1:22,0:22:11.90:12,0,80	1/1:28,0:27:17.04:83,17,0	0/0:21,0:34:18.01:0,18,172	0/0:35,0:34:18.41:0,18,137	1/1:17,0:16:2.84:14,3,0	./.	./.	0/1:20,0:20:0.07:1,0,0	1/1:32,0:30:0.47:1,0,0	0/1:19,0:21:0.01:0,0,0	1/1:15,0:15:2.84:14,3,0	1/1:11,7:19:11.86:110,12,0	1/1:31,0:31:2.71:14,3,0	1/1:20,0:20:2.84:14,3,0	1/1:27,0:27:5.68:29,6,0	1/1:12,0:12:11.36:56,11,0
chr10	48473490	.	CACACACACACACACACACACACACACACACACACACGTACGT	C	8534.40	PASS	AB=0.762;AC=17;AF=0.304;AN=56;BaseQRankSum=8.816;DP=690;FS=3.997;HRun=0;HaplotypeScore=507.7825;InbreedingCoeff=0.6793;MQ=50.06;MQ0=36;MQRankSum=-4.348;QD=41.63;ReadPosRankSum=1.546;VQSLOD=1.3467;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:35:75.93:0,76,8019	0/0:8,0:7:21.07:0,21,2842	0/0:34,0:6:4.43:0,4,271	0/0:29,0:5:8.04:0,8,724	0/1:12,19:30:37.33:383,0,37	0/0:22,0:22:45.61:0,46,5132	0/0:43,0:42:98.61:0,99,10638	0/1:4,0:2:0:0,0,0	0/0:20,0:20:25.44:0,25,2616	1/1:12,22:34:48.62:2635,49,0	1/1:14,12:26:9.03:716,9,0	0/0:27,0:27:69.71:0,70,7390	0/0:20,0:20:53.28:0,53,6022	1/1:11,17:27:18.06:1939,18,0	0/0:36,0:36:70.12:0,70,7986	0/0:38,0:36:79.65:0,80,9484	1/1:10,9:17:3.01:323,3,0	1/1:5,0:5:2.98:23,3,0	0/0:11,0:11:27.07:0,27,1762	0/0:18,0:18:27.09:0,27,2242	0/0:40,0:36:28.28:0,28,2216	0/0:26,0:24:61.74:0,62,6833	0/0:21,0:20:48.16:0,48,4987	0/0:24,0:24:46.10:0,46,6472	1/1:10,20:30:8.54:436,9,0	0/1:10,10:20:26.38:786,0,26	0/0:30,0:30:57.67:0,58,4146	1/1:3,5:7:12.04:1293,12,0
chr10	48473518	.	CACACACACGTACGT	C	5663.43	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=11.070;DP=565;FS=9.013;HRun=0;HaplotypeScore=206.8801;InbreedingCoeff=0.7708;MQ=49.82;MQ0=27;MQRankSum=-8.289;QD=23.31;ReadPosRankSum=0.767;VQSLOD=3.0331;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:28:50.33:0,50,1724	0/0:9,0:8:21.07:0,21,994	0/1:11,0:2:17.47:17,0,67	0/0:17,0:2:1.36:0,1,3	1/1:20,0:19:3.01:105,3,0	0/0:21,0:21:45.15:0,45,1910	0/0:43,0:42:99:0,100,4042	1/1:13,0:11:33.11:777,33,0	0/0:21,0:21:33.10:0,33,1009	1/1:23,0:23:45.63:1243,46,0	1/1:12,0:12:6.02:211,6,0	0/0:23,0:23:57.19:0,57,1889	0/0:23,0:23:57.10:0,57,1951	1/1:21,0:20:22.32:703,22,0	0/0:36,0:36:69.69:0,70,2418	0/0:31,0:29:69.24:0,69,2447	1/1:10,0:9:3.01:106,3,0	1/1:2,0:2:3.01:74,3,0	1/1:14,0:14:23.09:561,23,0	1/1:7,5:12:9.03:238,9,0	1/1:41,0:39:7.90:121,8,0	0/0:20,0:18:35.66:0,36,1273	0/0:22,0:21:54.17:0,54,1684	0/0:25,0:25:45.15:0,45,1823	1/1:21,0:20:3.01:105,3,0	1/1:10,0:10:18.06:472,18,0	1/1:9,18:27:17.08:509,17,0	1/1:6,0:5:12.04:422,12,0
chr10	48473526	.	CGTACGT	C	4235.18	PASS	AB=1.000;AC=30;AF=0.536;AN=56;BaseQRankSum=9.936;DP=499;FS=20.850;HRun=0;HaplotypeScore=136.1378;InbreedingCoeff=0.6542;MQ=53.08;MQ0=21;MQRankSum=-7.638;QD=17.01;ReadPosRankSum=0.885;VQSLOD=2.9375;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:20:2.29:0,2,1209	0/0:11,0:11:30.10:0,30,854	0/1:14,0:5:8.44:8,0,298	0/0:19,0:3:2.49:0,2,20	1/1:20,0:19:3.01:57,3,0	0/0:19,0:19:42.14:0,42,1310	0/0:36,0:37:97:0,97,2834	1/1:1,13:13:39.13:895,39,0	0/0:15,0:15:30.10:0,30,875	1/1:22,1:23:45.14:959,45,0	1/1:12,0:12:6.02:99,6,0	0/0:22,0:22:53.39:0,53,1461	0/0:21,0:21:50.39:0,50,1530	1/1:17,2:20:21.54:375,22,0	0/0:27,0:27:60.21:0,60,1821	0/1:20,0:19:31.73:32,0,1295	1/1:10,0:9:3.01:50,3,0	1/1:0,3:3:3.01:74,3,0	1/1:2,10:12:24.55:563,25,0	1/1:6,0:6:6.02:135,6,0	1/1:7,31:36:2.54:76,3,0	0/0:16,0:14:33.07:0,33,1000	0/0:18,0:18:54.17:0,54,1560	0/0:23,0:23:48.16:0,48,1467	1/1:21,0:20:3.01:53,3,0	1/1:10,0:10:18.06:416,18,0	1/1:20,0:20:12.04:244,12,0	1/1:6,0:5:12.04:199,12,0
chr10	48474033	.	AGCT	A	157.65	PASS	AB=0.802;AC=2;AF=0.036;AN=56;BaseQRankSum=5.386;DP=691;FS=7.526;HRun=0;HaplotypeScore=104.9658;InbreedingCoeff=-0.0382;MQ=79.57;MQ0=0;MQRankSum=4.215;QD=3.35;ReadPosRankSum=-0.139;VQSLOD=1.3666;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:90.29:0,90,2167	0/0:9,0:9:27.09:0,27,650	0/1:17,8:23:99:167,0,1033	0/1:18,4:20:79.62:80,0,957	0/0:23,0:23:63.22:0,63,1533	0/0:19,0:19:57.20:0,57,1405	0/0:43,0:43:99:0,129,3115	0/0:26,0:26:78.27:0,78,1906	0/0:23,0:23:69.24:0,69,1676	0/0:18,0:18:54.19:0,54,1331	0/0:18,0:18:54.17:0,54,1275	0/0:29,0:29:87.30:0,87,2141	0/0:28,0:28:84.29:0,84,2056	0/0:30,0:30:90.25:0,90,2162	0/0:23,0:23:69.22:0,69,1650	0/0:29,0:29:87.26:0,87,2092	0/0:38,0:38:99:0,114,2731	0/0:24,0:24:72.25:0,72,1773	0/0:22,0:22:66.23:0,66,1600	0/0:18,0:18:48.16:0,48,1183	0/0:43,0:43:99:0,126,3094	0/0:24,0:24:69.24:0,69,1675	0/0:20,0:20:57.18:0,57,1316	0/0:37,0:37:99:0,111,2655	0/0:22,0:22:63.20:0,63,1500	0/0:25,0:25:75.24:0,75,1754	0/0:19,0:19:54.19:0,54,1329	0/0:4,0:4:12.04:0,12,296
chr10	48474213	.	TG	T	8176	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=20.250;DP=750;FS=0.293;HRun=1;HaplotypeScore=108.8956;InbreedingCoeff=0.9998;MQ=86.43;MQ0=2;MQRankSum=-4.076;QD=36.34;ReadPosRankSum=1.193;VQSLOD=4.6843;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,136,2158	0/0:17,0:17:51.13:0,51,787	0/0:30,0:30:75.70:0,76,1126	0/0:32,0:32:90.01:0,90,1313	1/1:3,18:21:57.11:703,57,0	0/0:16,0:16:48.16:0,48,767	0/0:22,0:22:66.23:0,66,1053	1/1:0,23:22:66.21:856,66,0	0/0:25,0:25:75.26:0,75,1199	1/1:0,25:25:75.24:973,75,0	1/1:0,18:19:57.09:701,57,0	0/0:27,0:27:78.25:0,78,1224	0/0:29,0:29:87.20:0,87,1304	1/1:0,31:31:84.22:1071,84,0	0/0:40,0:40:99:0,120,1918	0/0:35,0:35:99:0,105,1678	1/1:0,22:23:66.21:857,66,0	1/1:0,18:18:48.16:623,48,0	0/0:13,0:13:39.13:0,39,623	0/0:26,0:26:78.25:0,78,1220	0/0:55,0:54:99:0,163,2582	0/0:28,0:28:81.24:0,81,1234	0/0:24,0:24:72.21:0,72,1104	0/0:34,0:34:99:0,102,1582	1/1:3,21:24:66.18:839,66,0	1/1:0,32:32:96.24:1203,96,0	0/0:26,0:26:75.20:0,75,1124	1/1:0,9:9:27.09:351,27,0
chr10	48475496	.	CTT	C	20702.71	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=14.293;DP=770;FS=3.229;HRun=4;HaplotypeScore=100.1403;InbreedingCoeff=0.9987;MQ=80.36;MQ0=5;MQRankSum=-1.724;QD=39.89;ReadPosRankSum=3.370;VQSLOD=4.0127;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:57:99:0,169,3076	0/0:6,0:6:18.06:0,18,337	0/0:18,0:18:48.16:0,48,821	0/0:21,0:21:54.15:0,54,895	1/1:0,29:29:81.23:1161,81,0	0/0:21,0:21:63.22:0,63,1180	0/0:26,0:26:78.27:0,78,1427	1/1:0,38:38:99:1675,114,0	0/0:27,0:27:78.27:0,78,1452	1/1:1,23:24:69.21:994,69,0	1/1:1,17:18:51.17:751,51,0	1/1:1,37:37:96.32:1413,96,0	1/1:1,30:30:81.27:1192,81,0	1/1:0,28:28:74.92:1104,75,0	0/0:46,0:46:99:0,135,2524	0/0:29,0:29:84.29:0,84,1565	1/1:1,30:30:84.25:1214,84,0	1/1:3,14:17:42.14:619,42,0	1/1:2,29:31:48.51:1235,49,0	1/1:2,25:26:69.23:1016,69,0	1/1:0,34:34:90.30:1326,90,0	1/1:1,17:18:45.15:663,45,0	1/1:0,27:26:69.23:1016,69,0	1/1:0,35:35:90.30:1325,90,0	1/1:0,16:16:45.15:663,45,0	1/1:0,36:36:99:1570,108,0	1/1:0,22:22:63.21:928,63,0	1/1:0,19:19:57.19:839,57,0
chr10	48476117	.	CT	C	345.74	PASS	AB=0.830;AC=8;AF=0.143;AN=56;BaseQRankSum=1.015;DP=591;FS=3.962;HRun=16;HaplotypeScore=79.1669;InbreedingCoeff=0.0427;MQ=72.10;MQ0=2;MQRankSum=-0.263;QD=2.32;ReadPosRankSum=3.130;VQSLOD=-0.4160;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:44.11:0,44,322	0/0:12,0:13:33.26:0,33,262	0/0:41,1:19:13.72:0,14,110	0/1:21,1:9:9.11:9,0,19	0/0:11,0:28:28.26:0,28,148	0/0:21,1:22:16.46:0,16,340	0/0:20,3:23:16.91:0,17,338	0/0:20,0:39:57.32:0,57,306	0/1:11,0:11:5.71:6,0,148	0/0:14,0:24:35.88:0,36,212	0/0:6,0:22:27.22:0,27,147	0/0:16,0:17:20.87:0,21,193	0/0:18,0:18:11.30:0,11,191	0/0:0,0:15:9.77:0,10,46	0/0:20,1:21:21.79:0,22,285	0/0:9,1:10:2.82:0,3,119	0/0:9,0:31:28.88:0,29,143	0/0:6,0:19:14.04:0,14,68	0/1:19,9:28:59.09:105,0,59	0/1:18,14:34:68.77:144,0,69	1/1:2,7:9:5.88:36,6,0	0/0:13,0:14:32.70:0,33,246	0/1:17,2:19:23.87:24,0,127	0/0:9,0:9:8.94:0,9,179	0/0:8,0:20:5.11:0,5,55	0/0:21,0:21:25.64:0,26,153	0/1:14,4:25:26.13:152,0,26	0/0:1,0:11:11.36:0,11,57
chr10	48476323	.	GGTGGACCACT	G	8173.17	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=13.686;DP=550;FS=23.456;HRun=0;HaplotypeScore=169.8674;InbreedingCoeff=0.9918;MQ=60.71;MQ0=0;MQRankSum=-12.151;QD=49.24;ReadPosRankSum=-0.037;VQSLOD=2.6904;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:81.22:0,81,3450	0/0:9,0:9:27.09:0,27,1431	0/0:19,0:16:38.62:0,39,1696	0/0:24,0:19:54.18:0,54,2224	1/1:15,15:29:14.45:803,14,0	0/0:19,0:19:45.13:0,45,2109	0/0:20,0:20:57.20:0,57,2952	1/1:3,12:15:38.99:938,39,0	0/0:30,0:30:84.29:0,84,4350	1/1:9,6:15:24.08:791,24,0	1/1:6,9:15:20.91:692,21,0	0/0:20,0:20:60.19:0,60,2985	0/0:27,0:27:72.25:0,72,3663	1/1:10,12:22:48.16:1558,48,0	0/0:25,0:25:72.22:0,72,3466	0/0:22,0:22:60.21:0,60,3168	1/1:4,9:13:21.07:623,21,0	1/1:0,7:7:18.06:593,18,0	0/0:23,0:22:48.15:0,48,2187	0/0:25,0:25:60.18:0,60,2786	0/0:23,0:23:57.16:0,57,2584	0/0:9,0:9:18.04:0,18,544	0/0:17,0:17:29.70:0,30,1181	0/0:14,0:14:42.14:0,42,2225	1/1:12,10:22:30.07:988,30,0	1/1:5,9:14:20.99:495,21,0	0/0:26,0:26:78.25:0,78,3887	1/1:2,11:13:21.07:692,21,0
chr10	48476326	.	GGACCACTGT	G	4731.36	PASS	AB=0.960;AC=19;AF=0.339;AN=56;BaseQRankSum=13.488;DP=494;FS=16.005;HRun=0;HaplotypeScore=156.9267;InbreedingCoeff=0.9445;MQ=61.91;MQ0=0;MQRankSum=-13.359;QD=36.12;ReadPosRankSum=0.761;VQSLOD=3.2982;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:66.20:0,66,3071	0/0:9,0:9:27.09:0,27,1324	0/0:17,0:15:38.34:0,38,1512	0/0:23,0:19:54.18:0,54,2164	0/1:23,1:24:0.92:379,0,1	0/0:18,0:18:39.13:0,39,1912	0/0:20,0:20:60.21:0,60,2861	1/1:12,2:14:14.96:493,15,0	0/0:29,0:29:87.30:0,87,4165	1/1:9,3:12:24.08:481,24,0	1/1:13,1:14:21.07:420,21,0	0/0:20,0:20:57.20:0,57,2711	0/0:26,0:26:75.26:0,75,3531	1/1:12,5:17:48.16:975,48,0	0/0:24,0:24:66.23:0,66,3143	0/0:21,0:21:63.22:0,63,3088	1/1:9,1:10:19.62:354,20,0	1/1:7,0:7:18.06:360,18,0	0/0:19,0:19:45.15:0,45,2130	0/0:25,0:25:60.19:0,60,2820	0/0:23,0:23:54.19:0,54,2642	0/0:8,0:8:15.05:0,15,566	0/0:12,0:12:21.07:0,21,1030	0/0:15,0:15:45.15:0,45,2204	1/1:12,0:12:30.10:600,30,0	1/1:10,0:10:14.72:251,15,0	0/0:26,0:26:75.26:0,75,3541	1/1:11,0:11:21.07:420,21,0
chr10	48481445	.	AT	A	592.57	PASS	AB=0.963;AC=3;AF=0.054;AN=56;BaseQRankSum=5.820;DP=546;FS=0.000;HRun=10;HaplotypeScore=55.6075;InbreedingCoeff=0.5928;MQ=81.82;MQ0=0;MQRankSum=3.156;QD=10.04;ReadPosRankSum=-4.796;VQSLOD=1.1448;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:45.03:0,45,465	0/0:8,0:8:18.01:0,18,172	0/1:24,1:15:6.96:7,0,135	0/0:21,0:20:2.30:0,2,145	0/0:32,0:32:80.29:0,80,953	0/0:28,1:29:58.16:0,58,855	0/0:14,0:14:17.85:0,18,354	1/1:6,27:33:80.87:686,81,0	0/0:12,0:12:36.09:0,36,391	0/0:17,1:18:22.08:0,22,472	0/0:18,0:18:51.11:0,51,548	0/0:18,0:18:48.12:0,48,518	0/0:19,0:19:51.14:0,51,563	0/0:18,0:18:54.12:0,54,580	0/0:24,0:24:69.13:0,69,734	0/0:19,0:19:45.12:0,45,495	0/0:20,0:19:48.06:0,48,515	0/0:16,0:18:44.07:0,44,492	0/0:14,0:14:38.94:0,39,412	0/0:25,0:25:66.16:0,66,720	0/0:10,0:10:29.07:0,29,291	0/0:12,0:12:36.08:0,36,383	0/0:22,0:22:63.12:0,63,663	0/0:10,0:10:27.06:0,27,291	0/0:23,0:23:65.50:0,65,678	0/0:25,0:25:57.09:0,57,592	0/0:24,0:24:72.19:0,72,796	0/0:14,0:14:42.11:0,42,459
chr10	48481553	.	A	ATTTT	5914.92	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=0.553;DP=491;FS=1.396;HRun=12;HaplotypeScore=89.8983;InbreedingCoeff=0.9369;MQ=66.68;MQ0=0;MQRankSum=-2.229;QD=26.06;ReadPosRankSum=-4.854;VQSLOD=2.6938;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:29:74.86:0,75,933	0/0:8,0:8:17.98:0,18,237	0/0:7,0:7:2.62:0,3,14	0/0:4,0:4:1.39:0,1,15	1/1:11,11:27:50.23:832,50,0	0/0:17,0:18:46.29:0,46,577	0/0:14,0:14:29.95:0,30,380	1/1:11,0:25:33.42:219,33,0	0/0:15,0:15:32.95:0,33,418	1/1:15,5:25:42.09:700,42,0	1/1:8,9:19:36.91:571,37,0	0/0:11,0:12:26.93:0,27,339	0/0:15,0:15:23.80:0,24,300	1/1:3,12:18:21.07:404,21,0	0/0:13,0:14:26.82:0,27,337	0/0:10,0:10:20.98:0,21,276	1/1:7,14:21:24.08:544,24,0	1/1:6,19:28:45.15:943,45,0	0/0:16,0:16:35.99:0,36,444	0/0:19,0:20:35.75:0,36,427	0/0:14,0:15:34.29:0,34,436	0/0:13,0:13:20.83:0,21,261	0/0:11,0:11:23.99:0,24,301	0/0:13,0:14:36.01:0,36,457	1/1:9,3:15:20.99:363,21,0	1/1:13,8:28:53.09:823,53,0	0/0:26,0:26:61.29:0,61,776	1/1:10,8:21:27.09:516,27,0
chr10	48481948	.	TA	T	8437.57	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=14.369;DP=703;FS=6.020;HRun=3;HaplotypeScore=64.1029;InbreedingCoeff=0.9999;MQ=83.45;MQ0=0;MQRankSum=-3.502;QD=33.35;ReadPosRankSum=-0.470;VQSLOD=4.9464;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:63.19:0,63,888	0/0:17,0:17:51.17:0,51,734	0/0:18,0:18:54.15:0,54,724	0/0:23,0:23:54.18:0,54,769	1/1:0,12:12:33.10:402,33,0	0/0:27,0:27:72.23:0,72,1017	0/0:29,0:29:87.29:0,87,1253	1/1:1,31:32:90.28:1105,90,0	0/0:30,0:30:81.27:0,81,1166	1/1:3,19:22:57.16:692,57,0	1/1:0,13:13:36.11:446,36,0	0/0:24,0:24:66.22:0,66,950	0/0:39,0:39:99:0,114,1641	1/1:2,34:36:99:1227,99,0	0/0:33,0:33:96.32:0,96,1382	0/0:27,0:27:81.27:0,81,1151	1/1:1,33:34:84.26:1041,84,0	1/1:0,36:36:99:1224,99,0	0/0:24,0:24:69.23:0,69,981	0/0:17,0:17:45.14:0,45,628	0/0:24,0:24:69.22:0,69,973	0/0:24,0:24:69.23:0,69,984	0/0:21,0:21:60.20:0,60,863	0/0:23,0:23:69.22:0,69,975	1/1:1,15:16:42.13:519,42,0	1/1:1,26:27:72.23:892,72,0	0/0:29,0:29:87.27:0,87,1209	1/1:1,24:25:72.23:890,72,0
chr10	48482066	.	GTCATACTAGTGACTT	G	6260	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=11.323;DP=660;FS=0.000;HRun=0;HaplotypeScore=272.3978;InbreedingCoeff=0.9953;MQ=81.51;MQ0=0;MQRankSum=-9.139;QD=79.24;ReadPosRankSum=2.477;VQSLOD=4.2475;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:78.27:0,78,5477	0/0:12,0:12:36.12:0,36,2472	0/0:17,0:17:51.18:0,51,3216	0/0:22,0:22:63.18:0,63,3918	0/0:21,0:20:51.13:0,51,3280	0/0:31,0:31:93.32:0,93,6666	0/0:20,0:20:60.17:0,60,3887	0/0:39,0:39:99:0,117,7347	0/0:22,0:22:60.19:0,60,3954	0/0:20,0:20:57.20:0,57,3680	0/0:17,0:17:45.15:0,45,3073	0/0:34,0:34:99:0,99,6781	0/0:31,0:31:93.31:0,93,6214	0/0:35,0:35:99:0,105,7184	0/0:40,0:40:99:0,120,8492	0/0:29,0:29:78.27:0,78,5813	0/0:14,0:14:42.14:0,42,3151	0/0:10,0:10:30.10:0,30,2186	1/1:2,14:16:42.13:1674,42,0	1/1:4,13:17:36.08:1504,36,0	1/1:8,14:22:15.05:653,15,0	0/0:22,0:22:63.18:0,63,4465	0/0:18,0:18:54.19:0,54,3708	0/0:25,0:25:75.26:0,75,5178	0/0:28,0:28:81.19:0,81,5340	0/0:31,0:31:87.30:0,87,6131	1/1:6,18:24:54.19:2428,54,0	0/0:17,0:17:48.16:0,48,3601
chr10	48482318	.	GAGTGGGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCT	G	3694.11	PASS	AC=6;AF=0.111;AN=54;BaseQRankSum=5.293;DP=439;FS=5.866;HRun=0;HaplotypeScore=416.7267;InbreedingCoeff=0.9293;MQ=66.66;MQ0=0;MQRankSum=-4.934;QD=127.38;ReadPosRankSum=3.195;VQSLOD=1.7592;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,105,11040	0/0:10,0:10:30.10:0,30,4708	0/0:19,0:17:51.18:0,51,3275	0/0:11,0:10:27.09:0,27,1565	0/0:17,0:17:48.16:0,48,5930	0/0:16,0:16:48.16:0,48,5710	0/0:20,0:20:60.21:0,60,7490	0/0:26,0:26:78.27:0,78,5855	0/0:13,0:13:39.13:0,39,6741	0/0:10,0:10:30.09:0,30,3673	0/0:17,0:17:51.17:0,51,4821	0/0:11,0:11:33.11:0,33,4213	0/0:18,0:18:51.18:0,51,6592	0/0:19,0:19:48.16:0,48,6952	0/0:14,0:14:42.13:0,42,4197	0/0:13,0:13:30.10:0,30,4005	0/0:23,0:23:66.23:0,66,7855	0/0:23,0:22:57.16:0,57,7745	1/1:6,1:7:6.02:383,6,0	1/1:9,5:14:18.06:1694,18,0	./.	0/0:13,0:13:36.11:0,36,3061	0/0:20,0:20:60.21:0,60,6491	0/0:8,0:8:21.07:0,21,2468	0/0:20,0:20:51.18:0,51,6054	0/0:23,0:21:57.20:0,57,6112	1/1:3,5:8:15.05:1618,15,0	0/0:4,0:4:9.03:0,9,649
chr10	48482405	.	AAAAAG	A	1937.72	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=4.713;DP=472;FS=0.000;HRun=0;HaplotypeScore=106.9913;InbreedingCoeff=0.9282;MQ=55.32;MQ0=1;MQRankSum=-3.732;QD=25.50;ReadPosRankSum=1.415;VQSLOD=3.3250;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:81.26:0,81,2155	0/0:6,0:6:15.05:0,15,292	0/0:10,0:6:15.05:0,15,311	0/0:10,0:7:3.61:0,4,256	0/0:19,0:18:33.01:0,33,726	0/0:17,0:17:41.71:0,42,1024	0/0:18,0:18:54.17:0,54,1333	0/0:20,0:18:38.03:0,38,777	0/0:16,0:16:45.15:0,45,1128	0/0:16,0:16:45.14:0,45,827	0/0:17,0:16:38.92:0,39,700	0/0:13,0:13:39.13:0,39,1004	0/0:21,0:21:54.17:0,54,1298	0/0:13,0:13:24.08:0,24,473	0/0:17,0:17:51.17:0,51,1175	0/0:16,0:16:45.15:0,45,1166	0/0:20,0:19:36.11:0,36,811	0/0:13,0:12:27:0,27,561	1/1:8,9:17:38.21:568,38,0	1/1:7,12:19:29.72:374,30,0	1/1:5,10:15:14.99:224,15,0	0/0:18,0:18:51.03:0,51,1127	0/0:16,0:16:42.09:0,42,1010	0/0:23,0:23:63.64:0,64,1550	0/0:18,0:17:45.15:0,45,931	0/0:23,0:23:60.16:0,60,1460	1/1:5,20:25:57.06:930,57,0	0/0:3,0:3:8.98:0,9,126
chr10	48482492	.	TATGCTAATGAAC	T	11158.47	PASS	AB=0.900;AC=21;AF=0.375;AN=56;BaseQRankSum=15.138;DP=513;FS=1.314;HRun=0;HaplotypeScore=188.2145;InbreedingCoeff=0.9138;MQ=85.72;MQ0=0;MQRankSum=-12.460;QD=60.64;ReadPosRankSum=0.775;VQSLOD=4.8174;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:75.23:0,75,4032	0/1:8,1:9:83.95:84,0,1237	0/0:26,0:26:31.45:0,31,2371	0/0:14,0:14:27.09:0,27,976	1/1:4,16:20:39.13:1256,39,0	0/0:18,0:18:51.18:0,51,2880	0/0:19,0:19:36.12:0,36,2143	1/1:9,5:14:14.99:369,15,0	0/0:22,0:22:57.20:0,57,3266	1/1:2,14:16:42.12:1411,42,0	1/1:5,16:21:33.11:1118,33,0	0/0:12,0:12:33.11:0,33,1804	0/0:21,0:21:60.21:0,60,3355	1/1:2,18:20:39.13:1336,39,0	0/0:16,0:16:36.12:0,36,2056	0/0:16,0:16:45.15:0,45,2679	1/1:6,5:11:12.04:397,12,0	1/1:5,9:14:18.06:648,18,0	0/0:9,0:9:21.07:0,21,1128	0/0:25,0:25:66.23:0,66,3800	0/0:32,0:32:84.23:0,84,4392	0/0:17,0:17:45.15:0,45,2534	0/0:7,0:7:21.07:0,21,1210	0/0:27,0:27:75.26:0,75,4101	1/1:4,22:26:60.21:2090,60,0	1/1:6,19:24:51.16:1585,51,0	0/0:23,0:22:57.20:0,57,3412	1/1:0,8:8:24.08:864,24,0
chr10	48482996	.	T	TAAAAGCTAAAGCCCA	10256.58	PASS	AB=1.000;AC=18;AF=0.321;AN=56;BaseQRankSum=14.543;DP=701;FS=21.253;HRun=0;HaplotypeScore=332.2893;InbreedingCoeff=0.8130;MQ=81.48;MQ0=0;MQRankSum=-12.679;QD=46.20;ReadPosRankSum=-1.601;VQSLOD=3.1501;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,105,4166	0/0:14,0:14:39.12:0,39,1592	0/0:27,0:27:71.72:0,72,2222	0/0:20,0:20:30.16:0,30,1307	1/1:24,0:24:29.81:711,30,0	0/0:26,0:26:69.22:0,69,2818	0/0:30,0:30:81.26:0,81,2987	0/1:56,0:55:99:1703,0,137	0/0:37,0:37:90.28:0,90,3565	1/1:19,1:41:15.55:2635,16,0	1/1:14,0:14:24:1090,24,0	0/0:31,0:31:87.28:0,87,3436	0/0:25,0:25:75.24:0,75,2946	1/1:15,0:15:21.07:1071,21,0	0/0:24,0:24:60.18:0,60,2269	0/0:24,0:24:72.23:0,72,2766	1/1:10,0:10:6.02:223,6,0	1/1:7,0:7:12.01:210,12,0	0/0:19,0:19:45.12:0,45,1311	0/0:32,0:32:84.27:0,84,3451	0/0:17,0:17:48.16:0,48,2011	0/0:25,0:25:69.24:0,69,2769	0/0:26,0:26:75.26:0,75,2947	0/0:28,0:28:69.24:0,69,2823	1/1:20,0:20:27.09:1370,27,0	0/1:27,0:27:2.31:1095,0,2	0/0:36,0:36:99:0,108,4361	1/1:8,0:8:3.01:150,3,0
chr10	48482999	.	A	AAGCTAAAGACCACAGTCTGTGGAAG	31626.08	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-1.371;DP=770;FS=3.019;HRun=0;HaplotypeScore=396.0992;InbreedingCoeff=0.9546;MQ=78.93;MQ0=0;MQRankSum=-13.250;QD=109.43;ReadPosRankSum=-4.402;VQSLOD=2.6290;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,109,6065	0/0:13,0:13:39.12:0,39,2320	0/0:27,0:27:71.39:0,71,3052	0/0:20,0:20:47.71:0,48,1809	1/1:2,5:41:32.82:1807,33,0	0/0:26,0:26:69.24:0,69,4212	0/0:32,0:32:87.26:0,87,4312	1/1:55,0:54:99:8444,150,0	0/0:35,0:35:96.28:0,96,5290	1/1:22,1:23:66.22:5201,66,0	1/1:2,7:33:29.93:2524,30,0	0/0:32,0:32:93.28:0,93,4878	0/0:26,0:26:78.23:0,78,4273	1/1:0,7:31:21.07:2459,21,0	0/0:24,0:24:66.18:0,66,3427	0/0:24,0:24:72.23:0,72,4089	1/1:0,2:19:6.02:667,6,0	1/1:9,0:9:14.91:647,15,0	0/0:19,0:19:51.14:0,51,1894	0/0:30,0:30:87.28:0,87,5188	0/0:17,0:17:51.17:0,51,3059	0/0:26,0:26:69.24:0,69,4027	0/0:29,0:29:84.24:0,84,4379	0/0:26,0:26:75.24:0,75,4297	1/1:1,9:25:27.09:3163,27,0	1/1:2,4:42:99:6363,99,0	0/0:36,0:36:99:0,108,6316	1/1:0,1:11:3.01:352,3,0
chr10	48483646	.	T	TCCAGGA	13507.79	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-6.836;DP=718;FS=18.207;HRun=0;HaplotypeScore=152.1528;InbreedingCoeff=0.9940;MQ=84.43;MQ0=0;MQRankSum=-16.253;QD=58.73;ReadPosRankSum=-0.937;VQSLOD=3.6996;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:60,0:60:99:0,157,3440	0/0:7,0:7:21.07:0,21,469	0/0:26,0:26:51.17:0,51,1079	0/0:32,0:32:83.54:0,84,1646	1/1:5,17:22:24.06:820,24,0	0/0:27,0:27:78.25:0,78,1662	0/0:29,0:29:78.22:0,78,1624	1/1:20,7:28:45.10:1103,45,0	0/0:18,0:18:51.18:0,51,1128	1/1:12,11:23:45.91:1509,46,0	1/1:5,9:14:24.08:814,24,0	0/0:28,0:28:81.26:0,81,1768	0/0:33,0:33:93.32:0,93,2076	1/1:10,22:37:87.30:2787,87,0	0/0:39,0:39:99:0,102,2246	0/0:29,0:29:75.26:0,75,1646	1/1:11,18:30:51.17:1729,51,0	1/1:6,6:13:27.09:826,27,0	0/0:22,0:22:60.21:0,60,1347	0/0:18,0:18:45.15:0,45,1011	0/0:31,0:31:78.27:0,78,1696	0/0:15,0:15:45.14:0,45,969	0/0:16,0:16:45.15:0,45,992	0/0:22,0:22:66.23:0,66,1482	1/1:8,14:23:36.12:1237,36,0	1/1:13,22:35:72.23:2272,72,0	0/0:36,0:36:99:0,102,2259	1/1:1,4:5:12.04:413,12,0
chr10	48484010	.	G	GAAAC	19261.47	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-12.704;DP=482;FS=0.767;HRun=0;HaplotypeScore=70.1568;InbreedingCoeff=0.9877;MQ=80.17;MQ0=0;MQRankSum=-8.085;QD=68.55;ReadPosRankSum=1.753;VQSLOD=6.9153;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:54.17:0,54,967	0/0:8,0:8:18.06:0,18,329	0/0:16,0:16:48.16:0,48,839	0/0:15,0:15:16.89:0,17,305	1/1:1,27:30:72.25:1917,72,0	0/0:15,0:15:45.15:0,45,840	0/0:6,0:6:18.05:0,18,305	1/1:11,13:24:69.24:1678,69,0	0/0:12,0:12:33.11:0,33,616	1/1:1,21:23:69.23:1778,69,0	1/1:0,17:18:48.16:1210,48,0	0/0:18,0:18:54.19:0,54,1007	0/0:21,0:21:54.19:0,54,999	1/1:2,9:11:30.10:776,30,0	0/0:17,0:17:51.17:0,51,943	0/0:16,0:16:48.14:0,48,827	1/1:3,19:22:57.09:1446,57,0	1/1:4,16:21:48.16:1272,48,0	1/1:5,16:21:60.19:1484,60,0	1/1:3,15:19:45.15:1179,45,0	1/1:0,3:3:9.03:240,9,0	0/0:13,0:13:36.12:0,36,665	0/0:15,0:15:42.14:0,42,784	0/0:8,0:8:21.07:0,21,392	1/1:0,13:13:36.12:959,36,0	1/1:2,19:21:60.21:1592,60,0	1/1:3,31:37:90.31:2371,90,0	1/1:0,18:18:51.18:1360,51,0
chr10	48484486	.	A	ATTTTCTTTTC	6407.78	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-6.074;DP=650;FS=8.878;HRun=0;HaplotypeScore=203.3616;InbreedingCoeff=0.9724;MQ=82.32;MQ0=0;MQRankSum=-8.975;QD=76.28;ReadPosRankSum=-3.364;VQSLOD=2.9344;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,110,3189	0/0:4,0:4:9.03:0,9,282	0/0:21,0:21:22.28:0,22,1330	0/0:24,0:24:33.72:0,34,1084	0/0:16,0:16:45.14:0,45,1238	0/0:34,0:34:78.27:0,78,2384	0/0:20,0:20:48.14:0,48,1367	0/0:33,0:33:69.23:0,69,1882	0/0:16,0:16:45.15:0,45,1367	0/0:34,0:34:87.29:0,87,2586	0/0:22,0:22:57.20:0,57,1755	0/0:24,0:24:57.20:0,57,1734	0/0:36,0:36:93.28:0,93,2733	0/0:35,0:35:87.27:0,87,2591	0/0:27,0:27:72.23:0,72,2156	0/0:25,0:25:60.17:0,60,1656	0/0:26,0:26:60.21:0,60,1782	0/0:17,0:17:45.13:0,45,1318	1/1:18,9:28:54.18:2497,54,0	1/1:5,8:14:27.06:1152,27,0	1/1:3,4:9:12.04:489,12,0	0/0:11,0:11:24.08:0,24,753	0/0:12,0:12:33.11:0,33,1035	0/0:25,0:25:63.22:0,63,1944	0/0:20,0:20:48.15:0,48,1393	0/0:34,0:34:84.29:0,84,2597	1/1:20,12:33:45.15:2270,45,0	0/0:7,0:7:21.07:0,21,659
chr10	48485170	.	TCATG	T	1115.30	PASS	AC=12;AF=0.545;AN=22;BaseQRankSum=3.723;DP=234;FS=0.000;HRun=0;HaplotypeScore=35.9392;InbreedingCoeff=0.7381;MQ=18.10;MQ0=153;MQRankSum=-2.081;QD=20.28;ReadPosRankSum=0.244;VQSLOD=2.6695;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/0:5,0:4:12.04:0,12,319	./.	./.	1/1:0,14:11:18.06:336,18,0	./.	./.	./.	./.	1/1:1,13:8:21.07:392,21,0	1/1:1,7:6:6.02:112,6,0	./.	0/0:7,0:1:3.01:0,3,79	./.	./.	./.	./.	./.	./.	0/0:21,0:21:51.18:0,51,1355	./.	0/0:9,0:8:8.90:0,9,239	0/0:6,0:5:9.03:0,9,239	./.	1/1:4,6:8:12.04:224,12,0	1/1:2,2:1:3.01:56,3,0	./.	1/1:0,5:3:6.02:112,6,0
chr10	48485735	.	TCATG	T	3777.02	PASS	AC=20;AF=0.417;AN=48;BaseQRankSum=8.733;DP=490;FS=35.745;HRun=0;HaplotypeScore=46.5138;InbreedingCoeff=0.8149;MQ=27.25;MQ0=148;MQRankSum=-2.651;QD=28.19;ReadPosRankSum=0.284;VQSLOD=1.3590;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:17:3.01:0,3,80	0/0:9,0:8:24.08:0,24,638	./.	./.	1/1:0,12:11:18.06:336,18,0	0/0:18,0:10:9.03:0,9,240	0/0:15,0:10:12.04:0,12,319	1/1:1,9:1:3.01:45,3,0	0/0:24,0:14:21.07:0,21,559	1/1:1,20:18:51.17:936,51,0	1/1:0,17:16:21.07:391,21,0	0/0:26,0:15:15.05:0,15,399	0/0:21,0:9:9.03:0,9,239	1/1:0,16:15:27.09:503,27,0	0/0:26,0:18:21.07:0,21,559	0/0:29,0:17:18.06:0,18,478	1/1:0,18:11:9.03:167,9,0	1/1:0,12:9:18.06:336,18,0	0/0:14,0:1:3.01:0,3,80	0/0:16,0:15:42.14:0,42,1118	./.	0/0:9,0:6:3.01:0,3,80	0/0:14,0:13:27.09:0,27,718	./.	1/1:0,12:12:33.11:615,33,0	1/1:0,13:7:21.07:392,21,0	0/0:29,0:23:36.12:0,36,955	1/1:0,3:1:3.01:56,3,0
chr10	48488255	.	GT	G	6096.60	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=17.379;DP=670;FS=14.735;HRun=8;HaplotypeScore=97.9017;InbreedingCoeff=0.9981;MQ=70.31;MQ0=0;MQRankSum=-12.003;QD=23.91;ReadPosRankSum=-1.434;VQSLOD=3.3894;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:84.25:0,84,1002	0/0:17,0:17:48.15:0,48,579	0/0:15,0:15:25.05:0,25,315	0/0:18,1:19:16.76:0,17,490	1/1:6,23:29:63.07:602,63,0	0/0:27,0:27:75.19:0,75,889	0/0:21,0:21:60.18:0,60,725	1/1:10,30:40:99:1064,114,0	0/0:24,0:24:69.21:0,69,833	1/1:4,17:21:51.06:486,51,0	1/1:7,22:29:71.91:667,72,0	0/0:20,0:20:57.15:0,57,674	0/0:29,0:29:84.19:0,84,975	1/1:3,25:28:74.99:701,75,0	0/0:18,0:18:51.13:0,51,594	0/0:18,0:18:45.12:0,45,522	1/1:7,12:19:44.98:415,45,0	1/1:4,10:14:30.04:289,30,0	0/0:37,0:37:99:0,99,1164	0/0:31,0:31:87.24:0,87,1024	0/0:22,0:22:48.15:0,48,580	0/0:19,0:19:42.13:0,42,507	0/0:20,0:20:60.10:0,60,671	0/0:19,0:19:54.17:0,54,652	1/1:3,18:21:56.94:520,57,0	1/1:7,27:34:92.98:861,93,0	0/0:25,0:25:72.14:0,72,830	1/1:1,19:20:51.08:492,51,0
chr10	48488271	.	A	ATT	8718.92	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=17.477;DP=675;FS=7.009;HRun=8;HaplotypeScore=115.2443;InbreedingCoeff=0.9982;MQ=72.13;MQ0=0;MQRankSum=-13.725;QD=33.03;ReadPosRankSum=-3.190;VQSLOD=3.4776;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:75.17:0,75,824	0/0:17,0:17:45.10:0,45,492	0/0:16,0:16:17.25:0,17,300	0/0:21,0:21:42.02:0,42,446	1/1:5,32:38:99:1502,102,0	0/0:23,0:23:63.15:0,63,692	0/0:20,0:20:48.12:0,48,535	1/1:14,0:43:70.13:284,70,0	0/0:25,0:25:66.17:0,66,736	1/1:2,20:25:68.71:1035,69,0	1/1:8,19:27:63.21:991,63,0	0/0:22,0:22:60.16:0,60,669	0/0:29,0:29:81.15:0,81,880	1/1:5,23:28:66.23:1046,66,0	0/0:18,0:18:45.12:0,45,502	0/0:20,0:20:57.13:0,57,625	1/1:2,15:17:45.15:712,45,0	1/1:4,10:14:27.09:424,27,0	0/0:41,0:41:99:0,117,1295	0/0:32,0:32:64.74:0,65,945	0/0:16,0:16:39.08:0,39,425	0/0:16,0:16:45.12:0,45,502	0/0:20,0:20:57.12:0,57,616	0/0:21,0:21:57.15:0,57,636	1/1:5,17:21:48.12:733,48,0	1/1:2,34:36:99:1617,102,0	0/0:27,0:27:78.21:0,78,869	1/1:8,6:14:27.06:374,27,0
chr10	48489576	.	CA	C	8763.06	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=11.151;DP=622;FS=3.596;HRun=1;HaplotypeScore=60.7934;InbreedingCoeff=0.9991;MQ=75.80;MQ0=0;MQRankSum=-0.937;QD=38.77;ReadPosRankSum=3.141;VQSLOD=5.5908;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:57.17:0,57,885	0/0:12,0:12:36.12:0,36,576	0/0:17,0:17:51.17:0,51,772	0/0:7,0:7:20.90:0,21,302	1/1:0,46:46:99:1719,123,0	0/0:20,0:20:60.20:0,60,959	0/0:15,0:15:45.14:0,45,696	0/0:45,0:45:95.90:0,96,864	0/0:23,0:23:69.23:0,69,1082	1/1:0,26:26:78.25:1074,78,0	1/1:0,25:25:69.23:964,69,0	0/0:23,0:23:69.24:0,69,1103	0/0:20,0:20:60.19:0,60,934	1/1:0,23:23:63.21:881,63,0	0/0:28,0:28:84.29:0,84,1343	0/0:21,0:21:63.21:0,63,1007	1/1:0,17:17:51.17:712,51,0	1/1:0,16:16:45.15:629,45,0	0/0:10,0:10:27.09:0,27,430	0/0:26,0:26:72.23:0,72,1126	0/0:21,0:21:63.20:0,63,983	0/0:17,0:17:51.17:0,51,813	0/0:22,0:22:66.23:0,66,1055	0/0:17,0:17:48.16:0,48,764	1/1:0,29:29:81.27:1132,81,0	1/1:1,27:28:36.27:1065,36,0	0/0:33,0:33:99:0,99,1513	1/1:0,16:16:42.14:587,42,0
chr10	48490190	.	C	CA	6079.89	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=15.182;DP=636;FS=2.503;HRun=2;HaplotypeScore=96.6192;InbreedingCoeff=0.9984;MQ=81.48;MQ0=0;MQRankSum=-4.817;QD=35.98;ReadPosRankSum=0.687;VQSLOD=5.0638;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:93.24:0,93,1113	0/0:6,0:6:18.06:0,18,223	0/0:20,0:20:54.16:0,54,648	0/0:25,0:25:50.45:0,50,653	1/1:3,18:21:42.10:579,42,0	0/0:14,0:14:42.12:0,42,507	0/0:23,0:23:60.17:0,60,730	0/0:37,0:37:99:0,99,1226	0/0:15,0:15:45.14:0,45,558	1/1:1,21:22:57.19:820,57,0	1/1:0,21:21:60.16:840,60,0	0/0:34,0:34:93.24:0,93,1128	0/0:30,0:30:87.27:0,87,1078	1/1:0,21:21:45.15:647,45,0	0/0:28,0:28:81.25:0,81,1002	0/0:22,0:22:63.20:0,63,780	1/1:1,15:16:45.15:647,45,0	1/1:1,8:9:24.08:346,24,0	0/0:25,0:25:66.21:0,66,818	0/0:28,0:28:81.25:0,81,1003	0/0:37,0:37:99:0,108,1322	0/0:14,0:14:42.13:0,42,520	0/0:17,0:17:45.14:0,45,557	0/0:25,0:25:69.22:0,69,854	1/1:1,18:19:48.16:690,48,0	1/1:1,20:21:60.20:864,60,0	0/0:33,0:33:96.28:0,96,1172	1/1:2,17:19:44.79:648,45,0
chr10	48490369	.	T	TTTTTTTTG	5749.84	PASS	AB=0.906;AC=18;AF=0.321;AN=56;BaseQRankSum=3.232;DP=540;FS=17.707;HRun=0;HaplotypeScore=188.5489;InbreedingCoeff=0.6413;MQ=61.61;MQ0=16;MQRankSum=-5.359;QD=24.89;ReadPosRankSum=1.680;VQSLOD=3.5101;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:47.17:0,47,469	0/0:5,0:5:12.03:0,12,219	0/0:62,0:13:14.16:0,14,140	0/1:38,0:13:7.35:7,0,122	1/1:32,0:31:38.55:1199,39,0	0/0:17,0:16:42.40:0,42,390	0/0:8,0:8:23.84:0,24,263	0/0:23,0:22:43.94:0,44,423	0/0:12,0:12:29.84:0,30,277	1/1:14,8:24:42.38:829,42,0	1/1:15,9:29:4:755,4,0	0/0:19,0:19:41.02:0,41,398	0/0:19,0:19:40.26:0,40,393	1/1:17,0:17:24.21:504,24,0	0/0:15,0:15:35.90:0,36,394	0/0:15,0:14:38.87:0,39,394	1/1:14,0:13:14.90:411,15,0	0/1:2,1:5:12.91:106,0,13	0/0:18,0:16:39.45:0,39,391	0/0:27,0:26:56.80:0,57,655	0/0:7,0:7:10.27:0,10,104	0/0:12,0:12:16.27:0,16,267	0/0:13,0:13:38.90:0,39,400	0/0:11,0:11:29.95:0,30,367	1/1:20,0:21:38.17:939,38,0	1/1:18,0:18:7.65:917,8,0	0/1:23,0:23:7.82:8,0,458	0/1:9,0:9:17.83:75,0,18
chr10	48490370	.	T	TTTTTTTG	5039.61	PASS	AB=1.000;AC=16;AF=0.286;AN=56;BaseQRankSum=4.328;DP=540;FS=24.709;HRun=0;HaplotypeScore=185.0920;InbreedingCoeff=0.6008;MQ=61.37;MQ0=16;MQRankSum=-6.514;QD=24.00;ReadPosRankSum=3.444;VQSLOD=2.9207;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:47.60:0,48,457	0/0:5,0:5:12.03:0,12,207	0/0:64,0:12:15.02:0,15,147	0/1:39,0:14:6.99:7,0,121	1/1:34,0:33:14.54:1093,15,0	0/0:17,0:16:42.62:0,43,382	0/0:8,0:8:23.89:0,24,259	0/0:23,0:22:44.34:0,44,424	0/0:12,0:12:27.40:0,27,252	1/1:24,0:23:36.33:732,36,0	0/1:29,0:29:52.39:625,0,52	0/0:19,0:19:44.43:0,44,407	0/0:19,0:19:41.30:0,41,376	1/1:17,0:17:24.06:489,24,0	0/0:14,0:14:35.92:0,36,380	0/0:15,0:14:38.89:0,39,383	1/1:7,6:13:14.89:358,15,0	0/1:5,0:5:15.79:81,0,16	0/0:19,0:17:36.15:0,36,392	0/0:27,0:26:59.84:0,60,648	0/0:7,0:7:9.91:0,10,104	0/0:11,0:11:16.90:0,17,260	0/0:13,0:13:38.72:0,39,382	0/0:11,0:11:29.95:0,30,351	1/1:21,0:21:36.92:785,37,0	1/1:18,0:18:10.49:818,10,0	0/0:22,0:22:0.71:0,1,469	0/1:9,0:9:25.79:52,0,26
chr10	48491497	.	ACCACTG	A	12173.74	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=16.711;DP=652;FS=8.216;HRun=0;HaplotypeScore=148.5052;InbreedingCoeff=0.9973;MQ=84.26;MQ0=0;MQRankSum=-17.785;QD=55.59;ReadPosRankSum=1.090;VQSLOD=4.9789;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:72.25:0,72,2544	0/0:8,0:8:24.07:0,24,764	0/0:29,0:29:81.26:0,81,2602	0/0:19,0:19:48.16:0,48,1483	1/1:0,32:32:69.15:1476,69,0	0/0:29,0:29:81.28:0,81,2848	0/0:21,0:21:60.21:0,60,2037	1/1:6,26:32:78.25:1709,78,0	0/0:24,0:24:72.23:0,72,2406	1/1:2,21:23:63.20:1414,63,0	1/1:1,27:28:66.17:1488,66,0	0/0:31,0:31:90.31:0,90,2937	0/0:28,0:28:81.28:0,81,2754	1/1:1,30:31:78.27:1818,78,0	0/0:25,0:25:75.26:0,75,2650	0/0:36,0:36:99:0,99,3454	1/1:0,8:8:21.03:439,21,0	1/1:3,7:10:18.03:371,18,0	0/0:16,0:16:42.14:0,42,1347	0/0:26,0:26:78.27:0,78,2652	0/0:30,0:30:90.30:0,90,3008	0/0:15,0:15:45.15:0,45,1590	0/0:22,0:22:63.22:0,63,2127	0/0:13,0:13:39.13:0,39,1377	1/1:1,16:17:45.15:1049,45,0	1/1:2,29:31:84.29:1920,84,0	0/0:33,0:33:93.32:0,93,3207	1/1:0,7:7:21.07:490,21,0
chr10	48491773	.	T	TA	9304.27	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-0.905;DP=732;FS=0.602;HRun=3;HaplotypeScore=79.3177;InbreedingCoeff=0.9998;MQ=77.85;MQ0=0;MQRankSum=-3.741;QD=36.63;ReadPosRankSum=-0.812;VQSLOD=4.9222;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,147,1738	0/0:11,0:11:33.08:0,33,382	0/0:14,0:14:30.07:0,30,332	0/0:21,0:21:45.01:0,45,557	1/1:2,31:33:78.17:1033,78,0	0/0:22,0:22:63.19:0,63,755	0/0:38,0:38:99:0,108,1284	1/1:4,30:34:90.29:1244,90,0	0/0:20,0:20:54.16:0,54,648	1/1:2,29:31:84.28:1175,84,0	1/1:0,29:29:72.11:941,72,0	0/0:26,0:26:69.21:0,69,828	0/0:25,0:25:66.15:0,66,754	1/1:3,27:30:81.27:1131,81,0	0/0:40,0:40:99:0,117,1381	0/0:33,0:33:93.26:0,93,1102	1/1:2,17:19:48.16:672,48,0	1/1:1,13:14:39.13:546,39,0	0/0:14,0:14:39.10:0,39,454	0/0:24,0:24:72.20:0,72,851	0/0:54,0:54:99:0,159,1866	0/0:15,0:15:39.12:0,39,468	0/0:16,0:16:45.14:0,45,539	0/0:26,0:26:72.22:0,72,864	1/1:1,24:25:72.24:1007,72,0	1/1:0,28:28:84.26:1155,84,0	0/0:28,0:26:81.22:0,81,947	1/1:0,11:11:30.07:399,30,0
chr10	48492116	.	G	GTTT	2140.36	PASS	AB=0.948;AC=16;AF=0.286;AN=56;BaseQRankSum=11.041;DP=560;FS=8.331;HRun=4;HaplotypeScore=105.5220;InbreedingCoeff=0.3575;MQ=63.17;MQ0=7;MQRankSum=-7.386;QD=8.43;ReadPosRankSum=0.082;VQSLOD=-0.5379;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:36.10:0,36,498	0/1:4,0:5:0.96:1,0,161	0/0:32,0:5:2.51:0,3,31	0/0:21,0:14:11.14:0,11,278	0/1:28,1:29:22.29:217,0,22	0/0:16,0:17:45.53:0,46,641	0/0:19,0:19:48.12:0,48,693	0/1:45,0:45:2.38:331,0,2	0/0:11,0:11:18.06:0,18,262	1/1:24,0:23:13.48:203,13,0	1/1:22,2:24:1.69:245,2,0	0/0:18,0:18:42.01:0,42,605	0/0:19,0:19:36.11:0,36,537	0/1:13,0:14:25.61:179,0,26	0/0:18,0:18:41.36:0,41,631	0/0:23,0:23:60.11:0,60,819	1/1:30,0:31:38.64:404,39,0	0/1:13,1:14:3.01:163,0,3	0/1:18,0:18:63.35:63,0,234	0/0:22,0:22:27.36:0,27,507	0/0:10,0:10:13.58:0,14,166	0/0:7,0:7:21.02:0,21,238	0/0:22,0:22:54.10:0,54,710	0/0:12,0:12:30.06:0,30,428	0/1:19,0:19:3.88:157,0,4	1/1:20,0:20:23.91:217,24,0	0/0:38,0:38:28.15:0,28,960	0/1:10,1:11:26.26:131,0,26
chr10	48492118	.	T	TTTG	4834.13	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=2.269;DP=580;FS=4.786;HRun=0;HaplotypeScore=105.8244;InbreedingCoeff=0.7255;MQ=63.37;MQ0=7;MQRankSum=-2.466;QD=15.06;ReadPosRankSum=0.081;VQSLOD=4.4534;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:38.85:0,39,388	0/0:5,0:5:13.27:0,13,151	0/0:36,0:6:4.39:0,4,23	0/0:24,0:14:25.65:0,26,241	1/1:29,1:30:25.36:403,25,0	0/0:18,0:18:41.87:0,42,509	0/0:20,0:20:53.93:0,54,635	1/1:49,0:49:94.52:1157,95,0	0/0:11,0:11:21.03:0,21,211	1/1:22,1:22:26.33:454,26,0	1/1:24,1:25:41.55:469,42,0	0/0:17,0:17:41.96:0,42,457	0/0:20,0:20:38.97:0,39,433	1/1:13,1:14:26.97:289,27,0	0/0:18,0:18:41.35:0,41,587	0/0:24,0:24:63.67:0,64,720	1/1:13,19:32:44.21:552,44,0	1/1:14,0:14:18.05:260,18,0	0/1:19,0:19:16.65:17,0,124	0/1:22,0:22:41.02:41,0,223	0/0:10,0:10:2.78:0,3,115	0/0:7,0:7:12.02:0,12,139	0/0:21,0:21:53.20:0,53,656	0/0:13,0:13:33.05:0,33,405	1/1:20,0:20:21.06:329,21,0	1/1:12,10:22:44.44:588,44,0	0/1:38,0:38:33.22:33,0,469	1/1:13,0:13:18.01:243,18,0
chr10	48492121	.	G	GTTGTT	5365.35	PASS	AB=0.890;AC=25;AF=0.446;AN=56;BaseQRankSum=3.055;DP=606;FS=12.440;HRun=0;HaplotypeScore=135.8843;InbreedingCoeff=0.6140;MQ=62.69;MQ0=7;MQRankSum=-2.936;QD=13.94;ReadPosRankSum=-2.845;VQSLOD=3.1703;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:18:43.92:0,44,470	0/0:5,0:5:14.62:0,15,183	0/1:37,0:6:3.93:4,0,18	0/0:26,0:14:23.65:0,24,210	1/1:12,1:37:57.53:506,58,0	0/0:17,0:20:37.47:0,37,621	0/0:16,0:18:52.93:0,53,754	1/1:46,0:46:94.02:890,94,0	0/0:11,0:12:20.94:0,21,251	1/1:8,9:24:39.16:551,39,0	1/1:5,14:24:45.94:631,46,0	0/0:14,0:17:26.66:0,27,497	0/0:20,0:20:45.05:0,45,544	1/1:13,0:13:26.99:272,27,0	0/0:16,0:19:35.86:0,36,755	0/0:20,0:23:62.27:0,62,807	1/1:30,1:35:44.59:621,45,0	1/1:5,0:15:17.95:290,18,0	0/1:15,0:17:99:142,0,112	0/1:12,0:26:66.68:67,0,217	0/1:10,0:10:35.29:35,0,103	0/0:7,0:7:12.03:0,12,163	0/0:17,0:20:52.88:0,53,719	0/0:15,0:16:40.69:0,41,478	1/1:4,0:22:23.02:361,23,0	1/1:17,1:20:50.88:617,51,0	0/1:34,0:38:78.35:78,0,468	1/1:6,1:20:0.40:300,0,0
chr10	48492123	.	T	TG	1641.19	PASS	AB=0.991;AC=11;AF=0.196;AN=56;BaseQRankSum=2.679;DP=598;FS=7.996;HRun=0;HaplotypeScore=87.9112;InbreedingCoeff=0.0096;MQ=61.49;MQ0=8;MQRankSum=-0.702;QD=6.62;ReadPosRankSum=3.126;VQSLOD=3.0569;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:51.39:0,51,425	0/0:5,0:5:14.90:0,15,149	0/0:41,0:5:8.82:0,9,60	0/0:27,0:14:30.71:0,31,243	0/1:35,0:35:99:151,0,130	0/0:18,0:18:48.04:0,48,486	0/0:19,0:19:57.08:0,57,619	1/1:10,38:48:5.37:665,5,0	0/0:12,0:12:24:0,24,225	0/1:23,0:22:66.83:162,0,67	0/1:22,0:22:22.27:143,0,22	0/0:17,0:17:32.88:0,33,385	0/0:20,0:20:53.94:0,54,529	0/1:11,1:12:37.34:86,0,37	0/0:20,0:20:52.29:0,52,572	0/0:22,0:22:65.34:0,65,675	0/1:34,0:34:2.16:123,0,2	0/1:16,0:16:19.57:84,0,20	0/0:18,0:18:46.20:0,46,333	0/0:25,0:25:56.83:0,57,366	0/0:9,0:9:14.93:0,15,138	0/0:5,0:5:12.02:0,12,124	0/0:20,0:20:57.76:0,58,602	0/0:17,0:17:51.06:0,51,542	0/1:20,0:20:13.17:83,0,13	0/1:20,0:20:99:217,0,110	0/0:34,0:35:98.74:0,99,707	0/1:18,0:18:56.17:76,0,56
chr10	48492128	.	T	TTG	279.75	PASS	AB=0.750;AC=1;AF=0.018;AN=56;BaseQRankSum=3.244;DP=579;FS=5.378;HRun=0;HaplotypeScore=96.0378;InbreedingCoeff=-0.0263;MQ=60.80;MQ0=8;MQRankSum=-1.452;QD=7.77;ReadPosRankSum=0.976;VQSLOD=2.9252;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:56.79:0,57,541	0/0:5,0:5:5.96:0,6,133	0/0:45,0:8:17.17:0,17,99	0/0:30,0:14:24.18:0,24,151	0/0:36,0:36:51.68:0,52,406	0/0:19,0:19:35.93:0,36,511	0/0:16,0:16:48.11:0,48,581	0/1:24,11:36:42.73:354,0,43	0/0:13,0:13:24.02:0,24,234	0/0:22,0:21:44.50:0,44,248	0/0:20,0:20:25.82:0,26,155	0/0:15,0:15:36.88:0,37,375	0/0:18,0:18:50.95:0,51,531	0/0:12,0:12:22.16:0,22,169	0/0:19,0:19:36.89:0,37,565	0/0:21,0:21:62.16:0,62,679	0/0:33,0:33:19.35:0,19,110	0/0:14,0:14:19.99:0,20,116	0/0:16,0:16:39.30:0,39,263	0/0:23,0:23:8.71:0,9,211	0/0:9,0:9:17.21:0,17,150	0/0:5,0:5:14.61:0,15,135	0/0:20,0:20:46.16:0,46,586	0/0:16,0:16:48.10:0,48,553	0/0:20,0:20:22.61:0,23,142	0/0:21,0:21:54:0,54,374	0/0:36,0:36:91.63:0,92,664	0/0:19,0:19:22.80:0,23,160
chr10	48492862	.	GTCTGTCTC	G	9113.95	PASS	AB=0.681;AC=18;AF=0.321;AN=56;BaseQRankSum=17.027;DP=736;FS=13.501;HRun=0;HaplotypeScore=188.5518;InbreedingCoeff=0.8738;MQ=62.55;MQ0=3;MQRankSum=-4.674;QD=37.66;ReadPosRankSum=-2.639;VQSLOD=2.8457;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,129,5303	0/0:14,0:14:42.13:0,42,1682	0/0:35,0:24:65.96:0,66,1656	0/0:27,0:19:44.96:0,45,1224	1/1:1,33:34:45.15:1049,45,0	0/0:31,0:31:90.23:0,90,3391	0/0:25,0:25:72.17:0,72,2691	1/1:5,40:45:99:1335,120,0	0/0:21,0:21:63.15:0,63,2103	1/1:0,22:22:65.56:1084,66,0	1/1:5,22:27:33.11:758,33,0	0/0:24,0:24:72.21:0,72,2843	0/0:26,0:26:73.46:0,73,2973	1/1:0,17:17:23.95:682,24,0	0/0:24,0:24:69.14:0,69,2332	0/0:37,0:37:99:0,111,3677	0/1:2,16:18:39.47:333,0,39	0/1:12,3:15:0.97:455,0,1	0/0:26,0:24:72.01:0,72,2019	0/0:32,0:32:96.26:0,96,3419	0/0:32,0:32:93.26:0,93,3594	0/0:19,0:19:51.13:0,51,1815	0/0:21,0:21:63.18:0,63,2350	0/0:23,0:23:66.16:0,66,2520	1/1:0,20:20:39.13:1056,39,0	1/1:1,29:30:86.87:1532,87,0	0/0:30,0:30:84.21:0,84,2950	1/1:0,14:14:30.10:832,30,0
chr10	48494325	.	T	TA	1817	PASS	AB=0.819;AC=25;AF=0.446;AN=56;BaseQRankSum=-3.304;DP=547;FS=4.490;HRun=16;HaplotypeScore=68.6314;InbreedingCoeff=0.0941;MQ=73.70;MQ0=4;MQRankSum=0.570;QD=5.44;ReadPosRankSum=-0.575;VQSLOD=2.3505;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,2:39:19.75:0,20,274	0/0:9,0:9:10.67:0,11,54	0/0:40,0:19:8.42:0,8,60	0/1:18,0:11:6.99:16,0,7	0/1:10,13:23:36.42:140,0,36	0/1:11,1:16:6.75:7,0,85	0/0:10,1:14:3.53:0,4,102	0/0:19,0:23:19.87:0,20,129	0/0:13,0:16:16.31:0,16,83	1/1:6,14:22:15.57:225,16,0	0/1:14,6:21:67.31:91,0,67	0/0:23,2:27:1.23:0,1,171	0/1:13,2:17:13.53:14,0,120	0/1:7,4:12:15.02:57,0,15	0/1:15,2:20:0.57:1,0,169	0/0:12,1:14:5.82:0,6,112	1/1:8,7:23:9.18:207,9,0	1/1:8,8:16:0.15:174,0,0	0/1:13,1:16:4.51:63,0,5	1/1:6,11:17:5.25:203,5,0	1/1:2,5:8:5.99:48,6,0	0/1:15,4:20:58.20:58,0,101	0/0:16,2:18:10.92:0,11,153	0/0:12,0:12:2:0,2,105	0/1:18,6:25:8.83:220,0,9	0/1:11,2:20:15.61:134,0,16	1/1:12,16:31:14.05:275,14,0	1/1:4,1:8:8.67:52,9,0
chr10	48494995	.	A	AGT	10862.40	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-2.297;DP=655;FS=4.142;HRun=0;HaplotypeScore=81.7363;InbreedingCoeff=0.9999;MQ=90.50;MQ0=0;MQRankSum=-7.814;QD=51.24;ReadPosRankSum=-0.661;VQSLOD=4.8803;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,117,1792	0/0:14,0:14:42.13:0,42,620	0/0:33,0:33:89.61:0,90,1278	0/0:26,0:26:72.24:0,72,1042	1/1:2,19:22:57.20:1101,57,0	0/0:22,0:22:66.22:0,66,1011	0/0:24,0:24:69.22:0,69,1035	1/1:6,21:28:81.19:1390,81,0	0/0:25,0:25:75.25:0,75,1145	1/1:6,17:23:63.22:1190,63,0	1/1:1,10:11:30.10:579,30,0	0/0:24,0:24:72.24:0,72,1099	0/0:31,0:31:84.29:0,84,1284	1/1:3,32:36:96.33:1845,96,0	0/0:29,0:29:87.30:0,87,1332	0/0:27,0:27:75.24:0,75,1126	1/1:0,21:21:57.20:1101,57,0	1/1:1,21:23:57.18:1100,57,0	0/0:16,0:16:48.14:0,48,712	0/0:16,0:16:48.16:0,48,733	0/0:28,0:28:81.27:0,81,1236	0/0:15,0:15:45.13:0,45,648	0/0:20,0:20:57.19:0,57,873	0/0:22,0:22:66.22:0,66,1011	1/1:2,20:22:57.20:1101,57,0	1/1:1,14:15:45.13:817,45,0	0/0:30,0:30:90.31:0,90,1377	1/1:0,11:11:33.11:637,33,0
chr10	48499449	.	A	AC	26233.27	PASS	AC=54;AF=0.964;AN=56;BaseQRankSum=-0.534;DP=698;FS=0.000;HRun=1;HaplotypeScore=116.1591;InbreedingCoeff=0.9810;MQ=81.48;MQ0=0;MQRankSum=-8.341;QD=39.04;ReadPosRankSum=5.511;VQSLOD=4.2768;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,34:36:99:1476,102,0	1/1:1,6:7:21.03:279,21,0	1/1:1,9:10:16.80:190,17,0	0/0:26,0:25:75.18:0,75,914	1/1:1,25:26:72.11:958,72,0	1/1:1,19:20:54.18:784,54,0	1/1:1,26:27:75.25:1086,75,0	1/1:1,36:37:99:1482,108,0	1/1:1,12:13:36.12:521,36,0	1/1:0,27:28:84.28:1188,84,0	1/1:1,17:18:45.15:651,45,0	1/1:1,28:29:78.22:1106,78,0	1/1:1,32:33:96.32:1391,96,0	1/1:1,32:33:90.30:1305,90,0	1/1:1,28:29:72.24:1044,72,0	1/1:2,26:28:72.24:1039,72,0	1/1:0,28:28:78.26:1129,78,0	1/1:1,13:14:30.10:433,30,0	1/1:1,27:28:84.22:1151,84,0	1/1:0,18:18:42.14:607,42,0	1/1:0,33:33:93.31:1347,93,0	1/1:0,22:22:57.19:827,57,0	1/1:0,26:26:68.95:975,69,0	1/1:0,24:24:72.24:1045,72,0	1/1:0,30:30:87.28:1228,87,0	1/1:2,35:37:99:1470,105,0	1/1:0,31:31:84.28:1216,84,0	1/1:0,7:7:21.07:305,21,0
chr10	48499715	.	T	TC	9751.78	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-15.307;DP=790;FS=2.370;HRun=3;HaplotypeScore=76.7626;InbreedingCoeff=0.9998;MQ=75.34;MQ0=0;MQRankSum=-4.245;QD=37.22;ReadPosRankSum=0.019;VQSLOD=5.1966;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:87.26:0,87,1044	0/0:10,0:10:27.08:0,27,324	0/0:20,0:20:57.06:0,57,623	0/0:29,0:29:81.20:0,81,932	1/1:0,23:23:63.21:879,63,0	0/0:26,0:26:72.21:0,72,852	0/0:20,0:20:50.59:0,51,631	1/1:7,34:41:99:1384,99,0	0/0:27,0:27:81.22:0,81,958	1/1:0,34:34:99:1428,102,0	1/1:0,19:19:51.17:714,51,0	0/0:30,0:30:81.21:0,81,947	0/0:32,0:32:96.28:0,96,1141	1/1:3,32:35:60.31:1252,60,0	0/0:33,0:33:96.28:0,96,1138	0/0:35,0:35:99:0,99,1188	1/1:1,26:27:69.23:966,69,0	1/1:0,22:22:63.21:878,63,0	0/0:30,0:30:78.23:0,78,926	0/0:21,0:21:56.97:0,57,683	0/0:69,0:69:99:0,193,2303	0/0:25,0:25:75.23:0,75,897	0/0:13,0:13:39.11:0,39,457	0/0:42,0:42:99:0,120,1427	1/1:3,20:23:54.18:756,54,0	1/1:1,22:23:63.19:864,63,0	0/0:31,0:30:90.27:0,90,1077	1/1:0,15:15:45.15:630,45,0
chr10	48500846	.	T	TATAAAAAGAG	21469.54	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-6.906;DP=629;FS=16.844;HRun=0;HaplotypeScore=161.2915;InbreedingCoeff=0.9628;MQ=64.88;MQ0=0;MQRankSum=-13.383;QD=79.52;ReadPosRankSum=-2.292;VQSLOD=3.5184;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:72.21:0,72,1846	0/0:8,0:8:21.06:0,21,596	0/0:14,0:14:1.44:0,1,710	0/0:6,0:6:18.05:0,18,418	1/1:12,26:40:84.11:2991,84,0	0/0:18,0:18:42.06:0,42,954	0/0:13,0:13:36.11:0,36,1027	1/1:22,15:43:99:2842,105,0	0/0:10,0:10:27.08:0,27,784	1/1:8,22:32:75.04:2552,75,0	1/1:10,21:33:60.21:2671,60,0	0/0:26,0:26:66.20:0,66,1862	0/0:23,0:23:60.17:0,60,1685	1/1:5,14:21:39.13:1725,39,0	0/0:20,0:20:57.20:0,57,1735	0/0:24,0:24:69.24:0,69,2018	1/1:9,7:16:17.99:783,18,0	1/1:8,14:23:39.13:1851,39,0	0/0:27,0:27:75.01:0,75,1617	0/0:40,0:40:99:0,108,2833	0/0:12,0:12:30.09:0,30,835	0/0:20,0:20:57.19:0,57,1694	0/0:29,0:29:84.26:0,84,2360	0/0:11,0:11:21.04:0,21,459	1/1:7,22:29:57.20:2686,57,0	1/1:3,17:22:57.18:2518,57,0	0/0:30,0:28:75.22:0,75,2049	1/1:1,8:11:18.06:850,18,0
chr10	48501732	.	C	CTCTT	14659.70	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=19.240;DP=655;FS=20.092;HRun=0;HaplotypeScore=167.9145;InbreedingCoeff=0.9997;MQ=74.62;MQ0=0;MQRankSum=-17.928;QD=70.82;ReadPosRankSum=-0.123;VQSLOD=4.4231;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:90.30:0,90,1746	0/0:16,0:16:45.15:0,45,886	0/0:14,0:14:27.13:0,27,680	0/0:16,0:16:38.83:0,39,656	1/1:12,15:27:72.25:1701,72,0	0/0:19,0:19:57.20:0,57,1102	0/0:25,0:25:72.23:0,72,1402	1/1:9,7:18:54.16:1341,54,0	0/0:26,0:26:78.27:0,78,1540	1/1:8,12:23:63.19:1581,63,0	1/1:4,13:17:48.16:1230,48,0	0/0:37,0:37:99:0,108,2040	0/0:37,0:37:99:0,108,2079	1/1:13,18:31:93.32:2367,93,0	0/0:29,0:28:87.30:0,87,1719	0/0:27,0:27:78.27:0,78,1558	1/1:4,10:14:34.28:817,34,0	1/1:4,7:11:27.89:734,28,0	0/0:20,0:20:60.21:0,60,1148	0/0:28,0:28:81.28:0,81,1581	0/0:25,0:25:75.26:0,75,1451	0/0:25,0:25:72.23:0,72,1403	0/0:18,0:18:54.12:0,54,991	0/0:21,0:21:60.21:0,60,1199	1/1:7,20:27:75.26:1934,75,0	1/1:7,20:27:81.27:2041,81,0	0/0:33,0:32:99:0,99,1944	1/1:2,10:12:36.12:914,36,0
chr10	48501737	.	C	CTAGA	14909.77	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=17.881;DP=656;FS=9.263;HRun=0;HaplotypeScore=161.9580;InbreedingCoeff=0.9998;MQ=74.01;MQ0=0;MQRankSum=-18.301;QD=71.00;ReadPosRankSum=-0.437;VQSLOD=5.9312;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:93.32:0,93,1949	0/0:15,0:15:45.15:0,45,930	0/0:14,0:14:39.13:0,39,767	0/0:15,0:15:42.08:0,42,753	1/1:16,14:31:70.05:1646,70,0	0/0:20,0:20:60.21:0,60,1257	0/0:26,0:26:78.25:0,78,1594	1/1:13,7:20:54.18:1416,54,0	0/0:24,0:24:72.23:0,72,1454	1/1:7,11:18:51.17:1357,51,0	1/1:9,13:22:63.20:1589,63,0	0/0:35,0:35:99:0,105,2164	0/0:36,0:36:99:0,108,2210	1/1:7,18:25:72.25:1831,72,0	0/0:28,0:27:84.29:0,84,1738	0/0:27,0:27:81.28:0,81,1698	1/1:2,10:12:30.99:786,31,0	1/1:4,7:11:33.11:903,33,0	0/0:19,0:19:57.19:0,57,1160	0/0:31,0:31:90.27:0,90,1760	0/0:25,0:25:72.23:0,72,1457	0/0:24,0:24:72.23:0,72,1455	0/0:19,0:19:45.94:0,46,1024	0/0:24,0:24:72.20:0,72,1449	1/1:5,20:25:72.25:1959,72,0	1/1:14,20:34:45.83:2520,46,0	0/0:32,0:31:96.31:0,96,1964	1/1:2,10:12:33.11:904,33,0
chr10	48502047	.	CTCGCGTTCGCGTTCACGT	C	1536.85	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=7.087;DP=715;FS=1.930;HRun=0;HaplotypeScore=320.1584;InbreedingCoeff=0.7431;MQ=66.33;MQ0=0;MQRankSum=-4.224;QD=26.50;ReadPosRankSum=-0.767;VQSLOD=2.0423;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:78.25:0,78,4782	0/0:13,0:13:15.04:0,15,576	0/1:14,0:14:2.80:3,0,31	0/0:10,0:9:2.94:0,3,18	0/0:30,0:29:45.09:0,45,1168	0/0:21,0:21:48.16:0,48,2981	0/0:28,0:28:66.19:0,66,2632	0/0:24,0:24:48.14:0,48,1256	0/0:36,0:36:72.20:0,72,4046	0/0:26,0:26:51.10:0,51,3055	0/0:16,0:16:36.04:0,36,1916	0/0:40,0:39:96.32:0,96,6066	0/0:42,0:42:99:0,102,4773	0/0:47,0:47:99:0,102,5740	0/0:31,0:31:75.24:0,75,4182	0/0:23,0:23:42.14:0,42,2664	0/0:34,0:34:84.23:0,84,5040	0/0:25,0:25:63.18:0,63,3319	1/1:4,7:11:21.01:731,21,0	1/1:7,11:18:24.08:645,24,0	0/0:24,28:52:1.21:0,1,4	0/0:21,0:21:36.11:0,36,1657	0/0:12,0:12:24.08:0,24,1441	0/0:35,0:35:69.19:0,69,4147	0/0:20,0:20:44.77:0,45,2238	0/0:24,0:23:51.17:0,51,3060	1/1:5,10:15:4.04:290,4,0	0/0:9,0:9:21.03:0,21,891
chr10	48502264	.	AC	A	7657.57	PASS	AB=0.966;AC=22;AF=0.393;AN=56;BaseQRankSum=15.490;DP=679;FS=9.237;HRun=1;HaplotypeScore=110.3566;InbreedingCoeff=0.7727;MQ=68.37;MQ0=15;MQRankSum=-3.078;QD=23.86;ReadPosRankSum=2.881;VQSLOD=4.1260;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:59.86:0,60,626	0/0:10,0:10:4.35:0,4,181	0/1:38,3:25:47.90:48,0,157	0/1:41,0:14:11.26:11,0,73	1/1:1,26:27:80.26:950,80,0	0/0:25,0:24:57.97:0,58,627	0/0:20,1:21:32.01:0,32,406	1/1:1,25:26:75.10:854,75,0	0/0:24,0:23:43.93:0,44,454	1/1:2,27:27:74.92:896,75,0	1/1:0,19:19:51.12:648,51,0	0/0:28,0:27:37.47:0,37,412	0/0:18,0:18:13.49:0,13,365	1/1:0,29:29:60.16:795,60,0	0/0:35,0:35:37.45:0,37,651	0/0:24,1:25:61.59:0,62,503	1/1:1,25:26:66.22:884,66,0	1/1:1,18:19:39.13:515,39,0	0/0:19,1:19:2.58:0,3,149	0/0:23,0:22:23.20:0,23,170	0/0:16,0:15:0.41:0,0,61	0/0:18,0:18:26.62:0,27,392	0/0:17,0:17:46.39:0,46,403	0/0:26,0:26:27.96:0,28,389	1/1:0,22:22:39.04:487,39,0	1/1:0,24:24:72.11:896,72,0	0/0:23,0:21:34.28:0,34,191	1/1:0,18:18:51.17:674,51,0
chr10	48502265	.	CA	C	3086.06	PASS	AB=0.736;AC=28;AF=0.500;AN=56;BaseQRankSum=12.169;DP=685;FS=32.335;HRun=14;HaplotypeScore=125.3185;InbreedingCoeff=0.7967;MQ=67.58;MQ0=15;MQRankSum=-0.361;QD=9.27;ReadPosRankSum=5.370;VQSLOD=0.4546;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,3:30:17.54:0,18,466	0/1:8,2:10:27.80:28,0,91	0/0:41,0:24:9.55:0,10,103	0/0:42,0:14:2.77:0,3,34	1/1:27,0:27:46.66:282,47,0	0/0:25,0:24:56.91:0,57,503	0/0:20,0:21:24.32:0,24,380	1/1:27,0:27:33.93:230,34,0	0/0:24,0:23:44.38:0,44,490	1/1:29,0:27:49.91:271,50,0	1/1:19,0:19:45.68:244,46,0	0/0:27,1:27:67.61:0,68,563	0/0:17,0:18:30:0,30,282	1/1:29,0:29:53.56:259,54,0	0/0:33,1:35:14.78:0,15,528	0/0:24,2:26:36.35:0,36,466	1/1:26,0:26:50.15:297,50,0	1/1:20,0:20:23.24:166,23,0	1/1:9,11:19:14.27:217,14,0	1/1:7,15:22:17.87:251,18,0	1/1:4,12:15:23.76:164,24,0	0/0:16,1:18:10.15:0,10,259	0/0:15,1:18:6.12:0,6,175	0/0:26,0:26:61.86:0,62,525	1/1:22,0:22:30.97:151,31,0	1/1:24,0:24:55.76:263,56,0	0/1:10,13:21:28.54:245,0,29	1/1:18,0:18:47.73:237,48,0
chr10	48504057	.	AT	A	8628.84	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=17.067;DP=687;FS=4.836;HRun=4;HaplotypeScore=63.7016;InbreedingCoeff=0.9994;MQ=83.31;MQ0=0;MQRankSum=-2.383;QD=32.81;ReadPosRankSum=-0.180;VQSLOD=5.3195;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:39.08:0,39,493	0/0:14,0:14:42.14:0,42,588	0/0:19,0:19:48.16:0,48,660	0/0:20,0:20:49.71:0,50,663	1/1:3,36:39:99:1224,102,0	0/0:37,0:37:99:0,108,1481	0/0:16,0:16:48.15:0,48,656	1/1:0,29:29:87.24:1022,87,0	0/0:15,0:15:42.13:0,42,571	1/1:0,31:31:90.25:1055,90,0	1/1:2,36:38:99:1224,102,0	0/0:26,0:26:72.20:0,72,951	0/0:25,0:25:72.24:0,72,1007	1/1:2,28:30:78.24:935,78,0	0/0:26,0:26:75.25:0,75,1050	0/0:29,0:29:87.27:0,87,1186	1/1:0,8:8:21.06:252,21,0	1/1:0,18:18:45.14:540,45,0	0/0:35,0:35:99:0,99,1386	0/0:31,0:31:90.29:0,90,1246	0/0:27,0:27:78.26:0,78,1092	0/0:18,0:18:54.15:0,54,712	0/0:28,0:28:84.28:0,84,1175	0/0:17,0:17:42.14:0,42,587	1/1:1,20:21:51.16:612,51,0	1/1:0,29:29:87.27:1044,87,0	0/0:27,0:27:81.27:0,81,1134	1/1:0,20:20:60.18:720,60,0
chr10	48508258	.	T	TG	4337.04	PASS	AB=0.773;AC=20;AF=0.357;AN=56;BaseQRankSum=-6.739;DP=266;FS=2.996;HRun=0;HaplotypeScore=145.9097;InbreedingCoeff=0.7465;MQ=62.20;MQ0=0;MQRankSum=-2.104;QD=40.53;ReadPosRankSum=2.095;VQSLOD=4.3109;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:8:21.02:0,21,248	0/0:6,0:6:18.05:0,18,230	0/0:7,0:7:5.24:0,5,125	0/1:7,0:7:12.30:12,0,77	1/1:0,9:9:21.54:315,22,0	0/0:10,0:10:26.94:0,27,327	0/0:10,0:10:28.12:0,28,341	1/1:0,18:18:54.15:829,54,0	0/0:1,0:1:3.01:0,3,40	1/1:0,10:10:30.10:477,30,0	1/1:0,9:9:26.96:394,27,0	0/0:8,0:8:24.08:0,24,321	0/0:13,0:13:32.20:0,32,436	1/1:0,13:13:39.13:616,39,0	0/0:16,0:16:48.09:0,48,620	0/0:9,0:9:27.09:0,27,365	1/1:0,7:7:15.05:237,15,0	0/1:1,5:6:13.20:130,0,13	0/0:13,0:13:36.10:0,36,484	0/0:14,0:14:34.66:0,35,421	0/0:1,0:1:3.01:0,3,42	0/0:5,0:5:15.05:0,15,201	0/0:13,0:13:27:0,27,431	0/0:5,0:5:11.40:0,11,130	1/1:0,11:11:33.11:518,33,0	1/1:0,16:16:48.16:763,48,0	0/0:20,0:20:56.23:0,56,709	1/1:0,1:1:3.01:48,3,0
chr10	48508272	.	TG	T	2952.55	PASS	AB=1.000;AC=31;AF=0.912;AN=34;BaseQRankSum=0.902;DP=143;FS=53.725;HRun=3;HaplotypeScore=183.8195;InbreedingCoeff=0.3255;MQ=75.74;MQ0=0;MQRankSum=-2.597;QD=23.43;ReadPosRankSum=3.278;VQSLOD=-0.6319;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,5:5:11.24:97,11,0	1/1:1,4:5:14.77:138,15,0	0/1:7,0:8:14.24:14,0,67	0/0:15,0:11:2.37:0,2,9	./.	1/1:0,7:7:18.51:183,19,0	1/1:0,7:7:20.64:193,21,0	./.	1/1:0,1:1:3.01:30,3,0	./.	./.	1/1:0,7:7:21.05:216,21,0	1/1:0,11:11:26.75:251,27,0	./.	1/1:0,12:12:36.08:370,36,0	1/1:0,7:7:21.05:217,21,0	./.	./.	1/1:0,7:7:18.04:183,18,0	1/1:0,12:12:26.53:271,27,0	./.	1/1:0,5:5:15.02:146,15,0	1/1:0,13:13:32.30:338,32,0	1/1:0,4:4:8.36:59,8,0	./.	./.	1/1:0,14:14:29.85:339,30,0	./.
chr10	48508318	.	TTG	T	4512.52	PASS	AB=0.500;AC=49;AF=0.907;AN=54;BaseQRankSum=9.809;DP=379;FS=50.574;HRun=0;HaplotypeScore=273.3589;InbreedingCoeff=0.5590;MQ=106.03;MQ0=10;MQRankSum=-6.808;QD=25.49;ReadPosRankSum=5.866;VQSLOD=3.5556;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,3:3:7.22:65,7,0	1/1:2,5:7:17.42:139,17,0	0/0:90,0:50:86.40:0,86,1457	0/0:107,1:52:2.22:0,2,981	1/1:2,6:8:24:231,24,0	1/1:2,8:10:27.20:229,27,0	1/1:1,2:3:9.02:95,9,0	1/1:4,10:14:41.32:401,41,0	1/1:3,1:4:11.67:82,12,0	1/1:1,10:11:29.57:350,30,0	1/1:2,8:10:29.42:238,29,0	1/1:0,5:5:14.99:160,15,0	1/1:2,7:9:24.48:195,24,0	1/1:1,10:10:30.04:319,30,0	1/1:1,6:7:20.77:203,21,0	1/1:0,4:4:11.86:109,12,0	0/1:0,2:2:0.99:29,0,1	1/1:2,1:3:8.60:58,9,0	1/1:0,3:3:8.94:98,9,0	1/1:4,12:16:42.74:379,43,0	./.	1/1:1,5:6:18.05:193,18,0	1/1:3,10:13:27.80:317,28,0	1/1:0,2:2:3:26,3,0	1/1:3,2:5:14.53:108,15,0	1/1:4,3:7:20.60:173,21,0	1/1:2,9:11:21.91:220,22,0	1/1:1,2:3:9.02:96,9,0
chr10	48508322	.	A	AT	1775.18	PASS	AC=50;AF=0.926;AN=54;BaseQRankSum=9.194;DP=376;FS=67.412;HRun=0;HaplotypeScore=276.0230;InbreedingCoeff=0.6588;MQ=106.39;MQ0=11;MQRankSum=-6.916;QD=10.03;ReadPosRankSum=6.581;VQSLOD=1.1076;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,3:3:3.78:15,4,0	1/1:2,5:7:15.07:67,15,0	0/0:89,0:50:65.18:0,65,835	0/0:107,0:50:74.16:0,74,767	1/1:2,6:8:11.18:61,11,0	1/1:1,9:10:22.22:108,22,0	1/1:1,2:3:8.63:45,9,0	1/1:11,3:14:38.17:181,38,0	1/1:3,1:4:10.44:51,10,0	1/1:1,10:11:24.98:146,25,0	1/1:2,8:10:24.73:111,25,0	1/1:0,5:5:13.01:63,13,0	1/1:2,7:9:18.30:82,18,0	1/1:1,10:10:22.74:106,23,0	1/1:1,6:7:17.94:82,18,0	1/1:0,4:4:10.18:49,10,0	1/1:0,2:2:0.50:1,0,0	1/1:2,1:3:8.85:57,9,0	1/1:2,1:3:5.50:26,5,0	1/1:5,11:16:31.57:146,32,0	./.	1/1:1,5:6:17.10:85,17,0	1/1:3,10:13:21.46:107,21,0	1/1:0,2:2:2.68:11,3,0	1/1:3,2:5:14.38:75,14,0	1/1:4,3:7:14.90:83,15,0	1/1:2,9:11:18.53:96,19,0	1/1:1,2:3:8.75:50,9,0
chr10	48508331	.	CT	C	3899.62	PASS	AC=48;AF=0.923;AN=52;BaseQRankSum=7.975;DP=334;FS=26.213;HRun=4;HaplotypeScore=255.1066;InbreedingCoeff=0.6713;MQ=106.50;MQ0=10;MQRankSum=-6.687;QD=23.78;ReadPosRankSum=7.285;VQSLOD=-0.4811;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,3:3:5.68:41,6,0	1/1:0,6:6:15.14:141,15,0	0/0:70,1:37:13.96:0,14,371	0/0:91,0:48:73.21:0,73,747	1/1:0,8:8:21.26:180,21,0	1/1:0,10:10:23.22:184,23,0	1/1:0,3:3:9.02:99,9,0	1/1:0,7:7:20.90:200,21,0	1/1:0,4:4:12.03:135,12,0	1/1:0,11:11:23.43:228,23,0	1/1:0,10:10:26.77:268,27,0	1/1:0,5:5:14.40:136,14,0	1/1:0,9:9:20.50:185,21,0	1/1:0,10:10:27.56:255,28,0	1/1:0,7:7:20.31:177,20,0	1/1:0,4:4:10.58:102,11,0	1/1:0,2:2:0.81:9,1,0	1/1:0,3:3:9.03:104,9,0	./.	1/1:0,15:15:33.90:313,34,0	./.	1/1:0,6:6:18.05:198,18,0	1/1:0,13:13:30.28:293,30,0	1/1:0,2:2:3:27,3,0	1/1:0,5:5:15.04:163,15,0	1/1:0,7:7:18.41:174,18,0	1/1:0,11:11:17.49:185,17,0	1/1:0,3:3:9.03:102,9,0
chr10	48508351	.	AT	A	4707.44	PASS	AB=0.982;AC=52;AF=0.963;AN=54;BaseQRankSum=2.274;DP=308;FS=33.885;HRun=6;HaplotypeScore=245.3057;InbreedingCoeff=0.0284;MQ=93.92;MQ0=7;MQRankSum=-1.417;QD=15.28;ReadPosRankSum=5.728;VQSLOD=0.8520;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,2:2:1.82:6,2,0	1/1:0,9:9:18.89:163,19,0	0/1:40,0:26:16.99:17,0,235	0/1:50,2:32:16.28:16,0,111	1/1:0,14:14:24.41:196,24,0	1/1:2,8:10:20.21:157,20,0	1/1:0,4:4:12.03:123,12,0	1/1:0,9:9:27.07:288,27,0	1/1:0,4:4:11.92:109,12,0	1/1:0,18:18:44.44:437,44,0	1/1:0,14:14:34.84:303,35,0	1/1:0,4:4:11.62:104,12,0	1/1:1,8:9:20.46:181,20,0	1/1:0,11:11:31.48:256,31,0	1/1:0,6:6:17.57:149,18,0	1/1:0,4:4:11.06:101,11,0	1/1:0,2:2:5.91:45,6,0	1/1:0,4:4:12.03:127,12,0	1/1:0,1:1:3.01:30,3,0	1/1:4,17:21:48.65:417,49,0	./.	1/1:0,11:11:33:320,33,0	1/1:1,17:18:34.83:309,35,0	1/1:1,2:3:2.91:18,3,0	1/1:0,7:7:21.05:215,21,0	1/1:0,8:8:21.90:203,22,0	1/1:1,15:16:25.25:263,25,0	1/1:0,5:5:15.03:156,15,0
chr10	48508730	.	TA	T	2524.36	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=8.956;DP=292;FS=1.061;HRun=9;HaplotypeScore=50.3961;InbreedingCoeff=0.9135;MQ=68.01;MQ0=0;MQRankSum=-4.089;QD=21.21;ReadPosRankSum=0.101;VQSLOD=4.0861;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:23.84:0,24,244	0/0:6,0:6:18.05:0,18,208	0/0:8,0:7:14.72:0,15,183	0/0:9,0:5:11.22:0,11,156	1/1:2,11:13:32.97:293,33,0	0/0:10,0:10:30.05:0,30,331	0/0:11,0:11:30.03:0,30,319	1/1:4,16:20:53.26:460,53,0	0/0:6,0:6:15.03:0,15,163	1/1:0,13:13:39.02:357,39,0	1/1:0,10:10:26.69:220,27,0	0/0:9,0:9:27.03:0,27,296	0/0:8,1:9:6.53:0,7,215	1/1:3,4:7:17.56:139,18,0	0/0:13,0:12:36.05:0,36,390	0/0:14,1:15:14.69:0,15,422	1/1:0,11:11:26.92:235,27,0	1/1:0,4:4:6:55,6,0	0/0:9,0:9:24.07:0,24,277	0/0:15,0:15:30.03:0,30,323	0/0:2,0:2:6.01:0,6,59	0/0:9,0:9:26.97:0,27,271	0/0:12,0:12:30.03:0,30,317	0/0:2,0:2:3.48:0,3,36	1/1:3,15:18:47.99:431,48,0	1/1:3,13:16:42.02:384,42,0	0/0:19,0:19:54.16:0,54,623	1/1:0,7:7:18.01:164,18,0
chr10	48509227	.	TAAA	T	5403.62	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=6.774;DP=438;FS=3.504;HRun=13;HaplotypeScore=73.6585;InbreedingCoeff=0.9504;MQ=60.33;MQ0=2;MQRankSum=-4.742;QD=27.43;ReadPosRankSum=1.844;VQSLOD=4.3663;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:54.17:0,54,968	0/0:7,0:7:15.05:0,15,259	0/0:10,0:4:9:0,9,92	0/0:8,0:7:14.48:0,14,131	1/1:3,21:24:57.05:674,57,0	0/0:14,0:15:39.08:0,39,658	0/0:10,0:10:24.08:0,24,447	1/1:6,26:31:66.06:774,66,0	0/0:12,0:13:33.09:0,33,594	1/1:3,19:21:45.05:547,45,0	1/1:1,15:16:42.09:508,42,0	0/0:13,0:14:42.14:0,42,755	0/0:13,0:14:27.07:0,27,483	1/1:3,19:22:51.13:618,51,0	0/0:17,0:18:48.16:0,48,894	0/0:19,0:20:54.15:0,54,936	1/1:0,16:16:42.13:511,42,0	1/1:3,11:14:30.08:363,30,0	0/0:3,0:15:38.86:0,39,302	0/0:3,0:16:37.71:0,38,318	0/0:1,0:6:11.97:0,12,95	0/0:1,0:1:3.01:0,3,58	0/0:7,0:8:21.06:0,21,358	0/0:13,0:12:36.11:0,36,653	1/1:3,19:22:48.10:584,48,0	1/1:3,20:23:57.11:680,57,0	0/0:5,0:30:65.75:0,66,504	1/1:2,4:6:12.04:146,12,0
chr10	48509655	.	AT	A	4611.37	PASS	AB=0.732;AC=28;AF=0.500;AN=56;BaseQRankSum=10.809;DP=549;FS=2.569;HRun=11;HaplotypeScore=75.4880;InbreedingCoeff=0.8443;MQ=72.23;MQ0=0;MQRankSum=-0.198;QD=15.90;ReadPosRankSum=2.019;VQSLOD=5.8113;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:87.16:0,87,901	0/1:9,1:10:0.60:1,0,187	0/0:15,1:13:15.47:0,15,120	0/0:18,1:16:2.34:0,2,198	1/1:5,18:23:41.38:337,41,0	0/0:32,1:35:60.44:0,60,778	0/0:23,1:24:35.96:0,36,574	1/1:9,26:35:71.87:590,72,0	0/0:10,0:10:27.07:0,27,288	1/1:5,15:21:37.96:301,38,0	1/1:5,13:18:35.15:277,35,0	0/0:13,1:14:16.28:0,16,283	0/0:24,0:27:68.41:0,68,661	1/1:4,15:19:6.94:264,7,0	0/0:24,1:25:41.50:0,42,633	0/0:18,0:19:43.12:0,43,459	1/1:3,18:21:21.95:386,22,0	1/1:2,12:14:32.96:271,33,0	1/1:7,9:17:31.97:252,32,0	1/1:4,18:22:18.98:362,19,0	0/1:3,12:15:28.64:145,0,29	0/0:8,0:8:15.03:0,15,154	0/0:11,0:11:27.03:0,27,266	0/0:15,0:16:41.93:0,42,423	1/1:1,10:11:25.38:219,25,0	1/1:4,23:27:65.89:542,66,0	1/1:2,22:24:50.51:418,51,0	1/1:1,12:13:29.97:246,30,0
chr10	48510262	.	T	TTGGGTTACTAAA	18831.69	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=13.799;DP=592;FS=5.952;HRun=0;HaplotypeScore=212.7245;InbreedingCoeff=0.9591;MQ=91.10;MQ0=0;MQRankSum=-13.934;QD=160.95;ReadPosRankSum=1.584;VQSLOD=5.2205;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,105,3978	0/0:6,0:6:18.06:0,18,713	0/0:25,0:25:65.88:0,66,2417	0/0:27,0:27:71.72:0,72,2174	1/1:1,16:17:51.16:2738,51,0	0/0:26,0:26:78.25:0,78,2867	0/0:23,0:23:63.22:0,63,2273	1/1:6,5:11:33.06:1154,33,0	0/0:26,0:26:78.24:0,78,2877	1/1:3,8:11:33.11:1747,33,0	1/1:1,14:15:45.15:2644,45,0	0/0:34,0:34:99:0,102,3969	0/0:37,0:37:99:0,108,3661	1/1:4,17:21:63.22:3575,63,0	0/0:27,0:27:81.26:0,81,2841	0/0:33,0:33:99:0,99,3870	1/1:1,3:4:12.04:665,12,0	1/1:1,2:3:9.03:494,9,0	0/0:20,0:20:54.19:0,54,2051	0/0:24,0:24:72.25:0,72,2669	0/0:34,0:34:99:0,102,3770	0/0:22,0:22:66.21:0,66,2434	0/0:26,0:26:75.23:0,75,2716	0/0:24,0:24:72.25:0,72,2794	1/1:3,14:17:51.16:2788,51,0	1/1:2,14:17:48.16:2837,48,0	0/0:25,0:25:72.22:0,72,2561	1/1:0,1:1:3.01:190,3,0
chr10	48510265	.	A	AAG	5159.22	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=15.627;DP=592;FS=7.155;HRun=0;HaplotypeScore=147.1124;InbreedingCoeff=0.9268;MQ=88.78;MQ0=0;MQRankSum=-14.545;QD=41.61;ReadPosRankSum=3.474;VQSLOD=6.0152;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,99,1515	0/0:7,0:7:21.05:0,21,298	0/0:27,0:27:74.91:0,75,1081	0/0:21,0:21:55.39:0,55,785	1/1:0,16:16:39.45:723,39,0	0/0:27,0:27:78.25:0,78,1151	0/0:23,0:23:69.21:0,69,1013	1/1:9,5:14:23.90:330,24,0	0/0:24,0:24:72.24:0,72,1102	1/1:5,8:14:35.59:592,36,0	1/1:0,14:14:37.68:674,38,0	0/0:35,0:35:99:0,102,1540	0/0:33,0:33:99:0,99,1489	1/1:2,19:21:50.88:933,51,0	0/0:26,0:26:78.24:0,78,1153	0/0:32,0:32:96.31:0,96,1448	1/1:2,3:5:3.03:149,3,0	1/1:1,2:4:4.92:103,5,0	0/0:20,0:20:54.16:0,54,784	0/0:24,0:24:69.22:0,69,1033	0/0:35,0:35:99:0,99,1453	0/0:23,0:23:69.20:0,69,1031	0/0:25,0:25:71.45:0,71,1063	0/0:24,0:24:72.22:0,72,1079	1/1:2,15:17:48.15:812,48,0	1/1:2,16:18:42.09:790,42,0	0/0:25,0:25:75.25:0,75,1144	1/1:0,1:1:3.01:54,3,0
chr10	48511103	.	GA	G	1160.04	PASS	AB=0.876;AC=12;AF=0.214;AN=56;BaseQRankSum=0.100;DP=527;FS=2.712;HRun=13;HaplotypeScore=137.3415;InbreedingCoeff=0.3918;MQ=68.62;MQ0=1;MQRankSum=4.789;QD=6.20;ReadPosRankSum=1.711;VQSLOD=2.0857;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:25:46.35:0,46,407	0/0:3,0:3:6.01:0,6,58	0/0:24,0:14:16.29:0,16,92	0/0:16,0:12:8.77:0,9,70	0/0:18,0:17:13.69:0,14,91	0/0:17,0:18:20.82:0,21,272	0/0:12,0:13:22.56:0,23,236	0/0:16,0:15:16.48:0,16,94	0/1:15,0:15:11.18:11,0,188	0/0:30,0:30:41.93:0,42,192	0/0:24,0:24:27.39:0,27,136	0/1:14,2:18:22.64:23,0,187	0/0:22,0:22:30.32:0,30,417	0/0:13,0:13:10.73:0,11,97	0/0:22,2:24:22.23:0,22,514	0/1:19,1:23:8.07:8,0,340	0/0:12,0:12:14.23:0,14,74	0/0:10,0:9:18.21:0,18,73	1/1:2,20:23:60.30:398,60,0	1/1:9,24:34:53.68:367,54,0	0/1:5,12:17:10.89:221,0,11	0/0:12,0:13:29.67:0,30,256	0/1:20,4:24:13.15:13,0,333	0/0:14,0:15:38.07:0,38,381	0/0:21,0:21:22.90:0,23,114	0/0:22,0:21:24.56:0,25,133	1/1:4,19:23:21.15:280,21,0	0/1:10,0:10:0.23:0,0,9
chr10	48511113	.	A	AG	338.31	PASS	AB=0.961;AC=7;AF=0.125;AN=56;BaseQRankSum=3.637;DP=537;FS=0.000;HRun=0;HaplotypeScore=71.1496;InbreedingCoeff=-0.1511;MQ=72.04;MQ0=1;MQRankSum=-6.732;QD=2.73;ReadPosRankSum=-1.690;VQSLOD=1.7753;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:58.21:0,58,705	0/0:4,0:4:12.02:0,12,135	0/0:29,0:19:21.50:0,22,271	0/0:15,0:11:11.36:0,11,109	0/0:18,0:17:31.03:0,31,205	0/0:18,0:18:46.24:0,46,512	0/0:14,0:14:42.02:0,42,489	0/0:18,0:17:33.81:0,34,227	0/0:15,0:15:44.92:0,45,463	0/1:25,0:25:50.81:51,0,288	0/1:27,1:28:94.44:94,0,241	0/0:20,0:20:50.93:0,51,534	0/0:26,0:26:78.11:0,78,891	0/1:12,0:12:31.08:31,0,97	0/0:27,0:27:81.14:0,81,989	0/0:23,0:23:59.65:0,60,691	0/0:11,0:11:4.52:0,5,111	0/1:12,0:11:68.33:105,0,68	0/0:21,0:21:62.30:0,62,427	0/0:34,0:34:86.71:0,87,623	0/0:20,0:20:59.63:0,60,481	0/0:12,0:12:30.77:0,31,417	0/0:24,0:24:62.75:0,63,687	0/0:15,0:15:44.95:0,45,550	0/1:19,0:19:72.18:72,0,187	0/1:15,7:21:59.08:59,0,202	0/0:23,0:23:56.49:0,56,420	0/1:6,0:6:24.09:56,0,24
chr10	48512301	.	TA	T	8480.79	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=17.755;DP=698;FS=4.824;HRun=3;HaplotypeScore=71.6052;InbreedingCoeff=0.9996;MQ=78.74;MQ0=0;MQRankSum=-0.559;QD=34.90;ReadPosRankSum=-0.124;VQSLOD=5.3163;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,114,1558	0/0:18,0:18:54.17:0,54,761	0/0:16,0:16:34.95:0,35,448	0/0:14,0:14:39.07:0,39,507	1/1:0,21:21:57.18:707,57,0	0/0:34,0:34:99:0,102,1434	0/0:9,0:9:27.09:0,27,389	1/1:0,23:23:69.20:833,69,0	0/0:35,0:35:99:0,102,1407	1/1:1,34:35:99:1251,102,0	1/1:0,27:27:78.25:967,78,0	0/0:28,1:29:44.08:0,44,1086	0/0:32,0:32:93.30:0,93,1320	1/1:1,26:27:69.22:855,69,0	0/0:35,0:35:99:0,102,1434	0/0:38,0:38:99:0,114,1641	1/1:0,21:21:60.19:744,60,0	1/1:0,16:16:48.15:595,48,0	0/0:17,0:17:51.17:0,51,734	0/0:42,0:42:99:0,120,1673	0/0:17,0:17:51.16:0,51,712	0/0:28,0:28:81.27:0,81,1166	0/0:15,0:15:45.14:0,45,630	0/0:12,0:12:36.12:0,36,518	1/1:0,29:29:78.25:967,78,0	1/1:1,34:35:99:1227,102,0	0/0:24,0:24:72.21:0,72,985	1/1:0,9:9:27.08:335,27,0
chr10	48518370	.	GT	G	1516.91	PASS	AB=0.941;AC=21;AF=0.375;AN=56;BaseQRankSum=8.354;DP=424;FS=9.760;HRun=4;HaplotypeScore=59.0244;InbreedingCoeff=0.7924;MQ=80.05;MQ0=1;MQRankSum=0.829;QD=9.36;ReadPosRankSum=5.282;VQSLOD=-0.0173;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:56.14:0,56,573	0/0:7,0:7:2.92:0,3,137	0/0:25,1:17:2.86:0,3,143	0/1:15,1:15:24.31:24,0,130	1/1:10,0:10:10.93:90,11,0	0/0:13,0:13:29.48:0,29,268	0/0:14,0:14:39.89:0,40,326	1/1:17,2:19:17.95:283,18,0	0/0:12,0:12:36.01:0,36,351	1/1:5,4:9:20.96:181,21,0	1/1:14,1:15:1.39:109,1,0	0/0:19,0:19:46.07:0,46,385	0/0:14,0:14:38.22:0,38,368	1/1:13,0:13:12.01:112,12,0	0/0:17,0:17:31.08:0,31,301	0/0:19,0:19:45.01:0,45,423	1/1:22,1:23:30.01:276,30,0	1/1:10,0:10:12:108,12,0	0/0:22,0:22:50.06:0,50,481	0/0:12,0:12:17.99:0,18,162	0/0:10,0:10:20.49:0,20,183	0/0:5,0:5:15.01:0,15,144	0/0:2,0:2:3:0,3,25	0/0:14,0:14:36.05:0,36,400	1/1:21,1:22:20.92:185,21,0	1/1:14,0:14:29.63:227,30,0	0/0:34,0:33:79.54:0,80,712	1/1:11,0:11:14.98:127,15,0
chr10	48518373	.	TTA	T	2257.49	PASS	AB=0.653;AC=18;AF=0.321;AN=56;BaseQRankSum=5.798;DP=435;FS=15.843;HRun=0;HaplotypeScore=55.8472;InbreedingCoeff=0.8191;MQ=75.63;MQ0=1;MQRankSum=1.856;QD=14.56;ReadPosRankSum=3.079;VQSLOD=1.5739;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:71.63:0,72,841	0/0:8,0:8:20.80:0,21,260	0/0:24,0:15:25.14:0,25,266	0/0:14,0:13:16.39:0,16,155	0/1:9,2:13:21.88:92,0,22	0/0:15,0:15:44.88:0,45,501	0/0:16,0:16:46.66:0,47,475	1/1:5,15:22:45.87:442,46,0	0/0:12,0:12:36.06:0,36,489	1/1:11,2:13:15.33:272,15,0	1/1:1,13:14:17.75:140,18,0	0/0:17,0:17:49.73:0,50,558	0/0:14,0:14:38.63:0,39,480	1/1:2,10:12:11.94:184,12,0	0/0:16,0:16:39.01:0,39,492	0/0:16,0:16:46.35:0,46,631	1/1:2,19:21:7.57:369,8,0	0/1:2,11:13:7.01:178,0,7	0/0:21,0:21:63:0,63,657	0/0:11,0:11:32.92:0,33,301	0/0:12,0:12:21:0,21,237	0/0:8,0:8:23.99:0,24,251	0/0:4,0:4:11.87:0,12,86	0/0:13,0:13:36.09:0,36,557	1/1:3,18:22:23.29:247,23,0	1/1:4,2:14:37.67:304,38,0	0/0:33,0:32:86.89:0,87,1001	1/1:0,11:11:17.95:233,18,0
chr10	48518676	.	T	TGG	4253.23	PASS	AC=20;AF=0.370;AN=54;BaseQRankSum=11.654;DP=291;FS=1.718;HRun=4;HaplotypeScore=47.5929;InbreedingCoeff=0.9043;MQ=60.03;MQ0=8;MQRankSum=-5.512;QD=36.35;ReadPosRankSum=-1.157;VQSLOD=3.8526;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:21:54.17:0,54,720	0/0:2,0:2:3.01:0,3,40	0/0:7,0:3:6.02:0,6,80	0/0:11,0:9:24.08:0,24,319	1/1:3,3:6:9.03:160,9,0	0/0:10,0:10:30.10:0,30,395	0/0:10,0:9:27.09:0,27,360	1/1:7,12:19:45.11:749,45,0	0/0:4,0:4:12.04:0,12,160	1/1:0,3:3:9.03:159,9,0	1/1:3,6:9:15.05:246,15,0	0/0:10,0:10:30.10:0,30,400	0/0:10,0:10:30.10:0,30,400	1/1:1,10:11:27.09:478,27,0	0/0:20,0:20:57.19:0,57,760	0/0:6,0:6:18.06:0,18,240	1/1:4,16:17:36.12:637,36,0	1/1:3,10:12:27.09:476,27,0	0/0:16,0:15:42.14:0,42,560	0/0:12,0:12:30.08:0,30,384	0/0:8,0:8:24.08:0,24,320	./.	0/0:1,0:1:3.01:0,3,40	0/0:11,0:11:30.10:0,30,399	1/1:1,13:14:30.10:532,30,0	1/1:1,8:9:24.08:424,24,0	0/0:13,0:13:33.11:0,33,440	1/1:5,7:11:24.04:392,24,0
chr10	48518775	.	AAAAGAACC	A	1825.64	PASS	AB=1.000;AC=23;AF=0.426;AN=54;BaseQRankSum=0.656;DP=246;FS=20.112;HRun=0;HaplotypeScore=66.5864;InbreedingCoeff=0.4534;MQ=45.06;MQ0=21;MQRankSum=-7.450;QD=13.04;ReadPosRankSum=-2.405;VQSLOD=-0.3739;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:15:32.66:0,33,847	0/0:6,0:6:14.98:0,15,400	0/0:15,0:2:6.02:0,6,85	0/0:16,0:6:6.95:0,7,128	1/1:5,1:5:6.89:32,7,0	0/0:8,0:8:21.07:0,21,673	0/1:8,0:7:7.55:8,0,401	1/1:21,1:21:59.95:717,60,0	0/0:2,0:2:6.02:0,6,121	./.	1/1:2,0:1:3.01:45,3,0	0/0:9,0:9:24.08:0,24,683	0/0:7,0:7:21.07:0,21,583	1/1:3,0:2:6.02:99,6,0	0/0:8,0:6:11.91:0,12,278	0/0:10,0:9:20.89:0,21,726	1/1:17,0:11:24.56:247,25,0	1/1:7,1:7:18.04:273,18,0	0/1:17,0:15:31.65:32,0,641	0/1:11,0:6:16.38:16,0,119	0/1:6,0:4:13.44:13,0,122	0/0:2,0:2:2.83:0,3,66	0/0:4,0:1:3.01:0,3,33	0/0:3,0:2:6.02:0,6,170	1/1:2,0:2:5.98:69,6,0	1/1:7,1:7:18.05:223,18,0	0/1:17,0:13:12.84:13,0,578	1/1:13,0:12:20.99:224,21,0
chr10	48518776	.	AAAGAACC	A	2293.51	PASS	AB=1.000;AC=23;AF=0.426;AN=54;BaseQRankSum=-0.245;DP=246;FS=19.764;HRun=0;HaplotypeScore=61.4587;InbreedingCoeff=0.4376;MQ=45.22;MQ0=20;MQRankSum=-5.630;QD=16.50;ReadPosRankSum=-2.712;VQSLOD=0.1678;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:15:32.66:0,33,777	0/0:6,0:6:14.98:0,15,366	0/0:15,0:2:6.01:0,6,62	0/0:16,0:6:3.59:0,4,114	1/1:6,0:5:6.89:33,7,0	0/0:8,0:8:21.07:0,21,615	0/1:8,0:7:7.53:8,0,368	1/1:17,5:21:60.03:869,60,0	0/0:2,0:2:6.02:0,6,127	./.	1/1:2,0:1:3.01:57,3,0	0/0:10,0:10:27.09:0,27,693	0/0:7,0:7:21.07:0,21,541	1/1:3,0:2:6.02:103,6,0	0/0:8,0:6:11.91:0,12,265	0/0:10,0:9:20.89:0,21,664	1/1:14,1:11:24.57:270,25,0	1/1:7,1:7:18.05:345,18,0	0/1:17,0:15:77.97:78,0,611	0/1:11,0:6:34.59:35,0,114	0/1:6,0:4:18.01:18,0,121	0/0:2,0:2:2.83:0,3,66	0/0:4,0:1:3.01:0,3,36	0/0:3,0:2:6.02:0,6,150	1/1:1,1:2:5.98:89,6,0	1/1:8,0:7:18.05:267,18,0	0/1:17,0:13:20.53:21,0,527	1/1:13,0:12:20.99:288,21,0
chr10	48518777	.	AAGAACC	A	2527.90	PASS	AB=1.000;AC=23;AF=0.426;AN=54;BaseQRankSum=-1.124;DP=248;FS=15.850;HRun=0;HaplotypeScore=58.0595;InbreedingCoeff=0.4529;MQ=45.36;MQ0=20;MQRankSum=-6.784;QD=17.93;ReadPosRankSum=-3.288;VQSLOD=0.5260;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:15:32.66:0,33,716	0/0:6,0:6:14.98:0,15,329	0/0:15,0:2:5.93:0,6,56	0/0:16,0:6:9.90:0,10,111	1/1:6,0:5:7.28:34,7,0	0/0:8,0:8:21.07:0,21,561	0/1:8,0:7:7.54:8,0,334	1/1:21,1:21:60.05:904,60,0	0/0:2,0:2:6.02:0,6,132	./.	1/1:1,1:1:3.01:57,3,0	0/0:10,0:10:27.09:0,27,644	0/0:7,0:7:21.07:0,21,501	1/1:2,1:2:6.02:105,6,0	0/0:8,0:6:11.83:0,12,251	0/0:10,0:9:20.89:0,21,600	1/1:15,1:11:25:296,25,0	1/1:8,0:7:21.06:371,21,0	0/1:18,0:16:99:132,0,652	0/1:11,0:6:34.11:34,0,105	0/1:6,0:4:19.05:19,0,120	0/0:2,0:2:2.83:0,3,66	0/0:4,0:1:3.01:0,3,32	0/0:3,0:2:6.02:0,6,137	1/1:2,0:2:5.98:76,6,0	1/1:8,0:7:18.05:300,18,0	0/1:18,0:14:45.42:45,0,542	1/1:11,2:12:20.99:334,21,0
chr10	48518778	.	AGAACC	A	2654.01	PASS	AB=0.982;AC=23;AF=0.426;AN=54;BaseQRankSum=-0.976;DP=244;FS=13.767;HRun=0;HaplotypeScore=53.0088;InbreedingCoeff=0.4313;MQ=48.64;MQ0=19;MQRankSum=-6.330;QD=19.51;ReadPosRankSum=-3.962;VQSLOD=0.9373;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:15:32.69:0,33,675	0/0:5,0:6:14.98:0,15,310	0/0:16,0:3:5.93:0,6,61	0/0:16,0:6:0.83:0,1,97	1/1:3,2:4:8.83:39,9,0	0/0:9,0:9:24.08:0,24,585	0/1:8,0:7:7.55:8,0,319	1/1:15,6:21:60.05:937,60,0	0/0:2,0:2:6.02:0,6,128	./.	1/1:2,0:1:3.01:57,3,0	0/0:9,0:10:27.09:0,27,615	0/0:7,0:7:21.07:0,21,470	1/1:3,0:2:6.02:106,6,0	0/0:8,0:6:11.89:0,12,244	0/0:9,0:8:21.07:0,21,538	1/1:13,4:12:28.01:349,28,0	1/1:7,1:7:21.06:366,21,0	0/1:18,0:16:99:176,0,621	0/1:9,1:5:50.24:50,0,94	0/1:6,0:4:20.53:21,0,120	0/0:2,0:2:2.83:0,3,66	0/0:4,0:1:3:0,3,29	0/0:3,0:2:6.02:0,6,121	1/1:2,0:2:5.98:80,6,0	1/1:5,3:7:18.05:300,18,0	0/1:18,0:14:56.73:57,0,488	1/1:6,2:9:20.99:292,21,0
chr10	48518781	.	ACC	A	1284.09	PASS	AB=0.851;AC=22;AF=0.407;AN=54;BaseQRankSum=3.084;DP=225;FS=2.196;HRun=2;HaplotypeScore=43.8944;InbreedingCoeff=0.4807;MQ=51.03;MQ0=16;MQRankSum=-6.715;QD=11.57;ReadPosRankSum=-2.838;VQSLOD=-0.2355;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:14:33.04:0,33,529	0/0:6,0:6:12.04:0,12,211	0/0:17,0:4:8.95:0,9,121	0/0:16,0:6:9.01:0,9,106	1/1:4,0:3:0.89:3,1,0	0/0:10,0:10:27.09:0,27,494	0/0:7,0:6:10.61:0,11,253	1/1:15,4:18:45:522,45,0	0/0:2,0:2:6.02:0,6,91	./.	1/1:2,0:1:3.01:37,3,0	0/0:10,0:10:27.09:0,27,486	0/0:8,0:8:24.08:0,24,390	1/1:1,2:2:6.02:69,6,0	0/0:7,0:5:12:0,12,158	0/0:9,0:8:21.07:0,21,365	1/1:12,1:9:16.19:153,16,0	1/1:7,1:7:20.22:180,20,0	0/1:12,3:14:84.97:85,0,485	0/1:7,3:5:29.50:29,0,71	0/1:6,0:4:11.55:12,0,98	0/0:1,0:1:3.01:0,3,55	0/0:4,0:1:3.01:0,3,31	0/0:2,0:2:6.02:0,6,85	1/1:1,0:1:2.98:21,3,0	1/1:8,0:7:16.81:179,17,0	0/1:12,4:12:48.66:49,0,407	1/1:6,0:6:14.94:127,15,0
chr10	48518800	.	TATATA	T	712.31	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=0.615;DP=218;FS=13.819;HRun=0;HaplotypeScore=62.7432;InbreedingCoeff=0.3258;MQ=74.42;MQ0=2;MQRankSum=0.667;QD=17.37;ReadPosRankSum=-4.469;VQSLOD=0.2496;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:30.10:0,30,883	0/0:4,0:4:9.03:0,9,235	0/0:15,0:10:27.07:0,27,425	0/0:17,0:8:10.90:0,11,91	0/0:8,0:8:8.05:0,8,84	0/0:8,0:8:24.08:0,24,761	0/0:4,0:4:12.04:0,12,326	1/1:7,14:20:39.02:551,39,0	0/0:3,0:3:9.03:0,9,226	0/1:4,0:4:26.18:26,0,133	1/1:4,0:4:8.71:68,9,0	0/0:11,0:11:33.11:0,33,849	0/0:7,0:7:21:0,21,496	0/0:3,0:3:3.01:0,3,52	0/0:3,0:3:6.02:0,6,185	0/0:8,0:8:24.08:0,24,687	0/0:14,0:11:14.44:0,14,128	0/0:5,0:5:11.11:0,11,65	0/0:13,0:12:36.12:0,36,785	0/0:7,0:7:18.06:0,18,339	0/0:8,0:8:24.08:0,24,397	0/0:4,0:4:12.04:0,12,206	0/0:3,0:3:6.02:0,6,81	0/0:3,0:3:9.03:0,9,168	0/1:3,0:3:29.45:29,0,44	0/1:9,0:9:26.44:173,0,26	0/0:11,0:11:33.11:0,33,761	0/0:3,0:3:0.48:0,0,8
chr10	48518804	.	TA	T	1361.36	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=4.476;DP=237;FS=0.642;HRun=2;HaplotypeScore=49.0466;InbreedingCoeff=0.8761;MQ=74.48;MQ0=2;MQRankSum=-1.113;QD=17.23;ReadPosRankSum=-2.446;VQSLOD=2.8702;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:33.11:0,33,478	0/0:3,0:3:9.03:0,9,130	0/0:13,0:10:27:0,27,296	0/0:17,0:8:9.88:0,10,89	1/1:10,0:10:8.23:66,8,0	0/0:9,0:9:27.09:0,27,400	0/0:5,0:5:15.01:0,15,195	1/1:17,1:17:38.98:428,39,0	0/0:4,0:4:12.04:0,12,169	1/1:5,0:5:9.48:100,9,0	1/1:0,6:6:15.05:191,15,0	0/0:15,0:15:45.07:0,45,601	0/0:7,0:7:18.06:0,18,262	1/1:5,0:5:0.47:1,0,0	0/0:2,0:2:6.02:0,6,90	0/0:9,0:9:27.07:0,27,371	1/1:7,3:9:14.98:138,15,0	1/1:6,0:6:9.01:89,9,0	0/0:15,0:14:41.95:0,42,537	0/0:9,0:9:26.97:0,27,329	0/0:12,0:12:32.93:0,33,402	0/0:4,0:4:11.77:0,12,114	0/0:3,0:3:8.84:0,9,73	0/0:4,0:4:12.04:0,12,164	1/1:1,4:5:12.01:129,12,0	1/1:1,6:7:18.02:212,18,0	0/0:11,0:11:32.83:0,33,403	1/1:7,0:7:20.89:209,21,0
chr10	48518805	.	A	AT	1824.50	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=3.899;DP=236;FS=2.140;HRun=1;HaplotypeScore=47.5099;InbreedingCoeff=0.8875;MQ=75.16;MQ0=1;MQRankSum=-2.219;QD=23.69;ReadPosRankSum=-2.191;VQSLOD=3.0515;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:33.11:0,33,451	0/0:3,0:3:9.03:0,9,124	0/0:13,0:10:27.01:0,27,292	0/0:16,0:8:11.79:0,12,99	1/1:0,9:9:9.03:142,9,0	0/0:9,0:9:27.09:0,27,376	0/0:5,0:5:15.01:0,15,186	1/1:17,0:17:36.05:355,36,0	0/0:5,0:5:12.04:0,12,164	1/1:0,5:5:15.05:219,15,0	1/1:6,0:6:15.05:191,15,0	0/0:15,0:15:45.13:0,45,592	0/0:7,0:7:18.06:0,18,248	1/1:0,5:5:3.01:48,3,0	0/0:2,0:2:6.02:0,6,84	0/0:9,0:9:27.07:0,27,352	1/1:5,5:9:15.05:229,15,0	1/1:2,3:5:9.03:141,9,0	0/0:15,0:14:42.11:0,42,542	0/0:9,0:9:27.07:0,27,338	0/0:13,0:13:33.10:0,33,425	0/0:5,0:5:12.03:0,12,139	0/0:4,0:4:9.02:0,9,100	0/0:4,0:4:12.04:0,12,162	1/1:4,1:5:12.04:172,12,0	1/1:6,1:7:18.06:239,18,0	0/0:11,0:11:33.10:0,33,424	1/1:4,3:7:21.07:295,21,0
chr10	48520095	.	A	AGGTCCAGGT	24879.06	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-13.237;DP=574;FS=14.787;HRun=0;HaplotypeScore=182.5990;InbreedingCoeff=0.9836;MQ=75.80;MQ0=0;MQRankSum=-17.660;QD=110.08;ReadPosRankSum=-1.683;VQSLOD=4.4410;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:75.26:0,75,2174	0/0:11,0:11:33.11:0,33,956	0/0:18,0:18:45.15:0,45,1277	0/0:20,0:20:54.73:0,55,1662	1/1:6,19:27:48.16:2337,48,0	0/0:21,0:21:63.18:0,63,1752	0/0:21,0:21:63.19:0,63,1810	1/1:28,12:36:96.31:3877,96,0	0/0:18,0:18:51.17:0,51,1602	1/1:7,17:27:81.24:3695,81,0	1/1:3,15:22:44.85:2205,45,0	0/0:26,0:26:75.26:0,75,2245	0/0:21,0:21:60.21:0,60,1761	1/1:10,14:25:72.25:3232,72,0	0/0:25,0:25:69.24:0,69,2099	0/0:27,0:27:81.28:0,81,2371	1/1:2,6:11:21.07:861,21,0	1/1:9,7:18:36.12:1539,36,0	0/0:15,0:15:45.15:0,45,1286	0/0:20,0:20:60.21:0,60,1888	0/0:17,0:17:51.18:0,51,1426	0/0:14,0:14:42.14:0,42,1206	0/0:13,0:13:36.12:0,36,1096	0/0:10,0:10:30.10:0,30,908	1/1:8,18:27:75.26:3610,75,0	1/1:10,14:24:72.25:3226,72,0	0/0:25,0:25:75.26:0,75,2258	1/1:0,2:4:6.02:297,6,0
chr10	48520947	.	T	TAA	9885.84	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=16.960;DP=724;FS=1.695;HRun=9;HaplotypeScore=111.4832;InbreedingCoeff=0.9875;MQ=76.89;MQ0=0;MQRankSum=0.759;QD=34.33;ReadPosRankSum=-1.027;VQSLOD=4.1556;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:24:39.90:0,40,615	0/0:13,0:13:36.07:0,36,375	0/0:20,0:21:8.62:0,9,304	0/0:16,0:16:20.87:0,21,196	1/1:5,35:40:99:1364,105,0	0/0:26,0:26:60.12:0,60,631	0/0:18,0:18:42.06:0,42,439	1/1:20,1:36:77.77:740,78,0	0/0:17,0:17:39.07:0,39,415	1/1:3,30:34:93.23:1329,93,0	1/1:5,19:25:60.16:880,60,0	0/0:28,0:28:75.65:0,76,799	0/0:23,0:23:60.10:0,60,630	1/1:3,25:29:69.23:1062,69,0	0/0:34,0:34:84.15:0,84,878	0/0:30,0:29:87.17:0,87,903	1/1:3,24:31:65.70:961,66,0	1/1:3,21:24:57.19:870,57,0	0/0:16,0:16:36.07:0,36,383	0/0:38,0:38:99:0,102,1085	0/0:20,0:20:57.13:0,57,598	0/0:27,0:27:66.09:0,66,691	0/0:28,0:28:68.85:0,69,698	0/0:16,0:17:33.01:0,33,407	1/1:3,21:25:60.20:924,60,0	1/1:5,33:39:99:1525,102,0	0/0:39,0:38:99:0,108,1121	1/1:0,5:5:15.05:231,15,0
chr10	48521744	.	C	CTT	8131.56	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=2.713;DP=631;FS=0.000;HRun=9;HaplotypeScore=91.7595;InbreedingCoeff=0.9949;MQ=79.01;MQ0=0;MQRankSum=-1.808;QD=32.92;ReadPosRankSum=-0.364;VQSLOD=4.7340;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:63.13:0,63,660	0/0:18,0:18:48.08:0,48,500	0/0:20,0:21:40.41:0,40,411	0/0:9,0:9:14.99:0,15,148	1/1:2,25:28:71.69:1037,72,0	0/0:20,0:20:60.14:0,60,631	0/0:11,0:11:24.02:0,24,255	1/1:12,27:40:77.66:1048,78,0	0/0:17,0:17:48.08:0,48,501	1/1:4,13:18:41.62:590,42,0	1/1:2,22:25:61.94:877,62,0	0/0:26,0:26:66.08:0,66,674	0/0:28,0:28:78.16:0,78,822	1/1:2,30:34:81.18:1210,81,0	0/0:27,0:27:69.13:0,69,718	0/0:23,0:23:66.16:0,66,702	1/1:3,17:22:50.14:703,50,0	1/1:3,6:9:15.05:231,15,0	0/0:23,0:23:63.10:0,63,643	0/0:31,0:31:80.94:0,81,825	0/0:17,0:17:45.10:0,45,479	0/0:25,0:25:61.87:0,62,653	0/0:19,0:19:54.09:0,54,559	0/0:11,0:11:33.06:0,33,341	1/1:5,25:31:65.71:979,66,0	1/1:4,15:20:45.09:626,45,0	0/0:35,0:36:92.88:0,93,944	1/1:0,20:20:54.18:831,54,0
chr10	48522713	.	GTATAA	G	143.90	PASS	AC=6;AF=0.188;AN=32;BaseQRankSum=0.034;DP=246;FS=6.467;HRun=0;HaplotypeScore=52.7379;InbreedingCoeff=0.5334;MQ=91.66;MQ0=5;MQRankSum=1.371;QD=4.50;ReadPosRankSum=0.215;VQSLOD=0.6731;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:3,0:9:9.03:0,9,196	0/0:2,0:2:3.01:0,3,85	./.	0/0:38,0:21:10.97:0,11,97	0/0:9,0:9:6.02:0,6,170	0/0:11,0:11:12.04:0,12,339	./.	0/0:32,0:32:39.13:0,39,1035	./.	./.	./.	./.	0/0:4,0:4:2.94:0,3,18	./.	./.	0/0:8,0:8:9.03:0,9,254	0/0:13,0:13:30.06:0,30,726	0/0:13,0:13:21.04:0,21,530	1/1:7,0:6:3:27,3,0	1/1:7,1:8:3.01:55,3,0	./.	./.	./.	./.	0/0:4,0:6:6.02:0,6,104	0/0:2,0:2:3.01:0,3,85	1/1:10,7:17:9.03:165,9,0	0/0:10,0:10:18.06:0,18,509
chr10	48523808	.	AT	A	1077.49	PASS	AC=20;AF=0.455;AN=44;BaseQRankSum=5.412;DP=101;FS=7.587;HRun=1;HaplotypeScore=53.3721;InbreedingCoeff=0.6196;MQ=41.73;MQ0=5;MQRankSum=-5.447;QD=14.56;ReadPosRankSum=5.423;VQSLOD=2.8282;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	0/0:3,0:1:3.01:0,3,37	1/1:1,9:9:22.59:124,23,0	0/0:1,0:1:3.01:0,3,38	0/0:1,0:1:3.01:0,3,38	1/1:2,13:13:38.75:283,39,0	./.	1/1:0,7:7:20.48:145,20,0	1/1:0,5:5:14.21:71,14,0	0/0:1,0:1:3.01:0,3,38	0/0:2,0:2:6.02:0,6,75	1/1:1,4:5:14.50:81,15,0	0/0:2,0:2:6.02:0,6,75	0/0:2,0:2:6.02:0,6,75	1/1:1,2:2:2.90:16,3,0	1/1:0,2:2:5.91:38,6,0	0/0:2,0:2:6.01:0,6,66	0/0:5,0:5:3.01:0,3,30	0/0:1,0:1:0:0,0,0	0/0:2,0:2:6.02:0,6,75	./.	./.	1/1:0,9:9:20.47:121,20,0	1/1:0,16:16:47.39:314,47,0	0/0:4,0:4:3.01:0,3,31	1/1:0,2:2:5.91:38,6,0
chr10	48523814	.	AT	A	1354.28	PASS	AB=1.000;AC=21;AF=0.404;AN=52;BaseQRankSum=7.059;DP=121;FS=19.610;HRun=1;HaplotypeScore=48.4340;InbreedingCoeff=0.6469;MQ=55.24;MQ0=4;MQRankSum=-6.445;QD=16.32;ReadPosRankSum=5.777;VQSLOD=2.0523;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:1,0:1:2.99:0,3,23	./.	0/0:2,0:2:5.98:0,6,58	0/0:3,0:1:3.01:0,3,35	1/1:2,9:10:26.88:178,27,0	0/0:2,0:2:6.02:0,6,75	0/0:2,0:2:6.02:0,6,75	1/1:4,13:15:38.90:310,39,0	./.	1/1:2,7:9:25.72:204,26,0	1/1:1,5:6:15.07:85,15,0	0/0:1,0:1:3.01:0,3,38	0/0:2,0:2:6.02:0,6,75	1/1:1,4:5:14.71:91,15,0	0/0:2,0:2:6.02:0,6,75	0/0:3,0:3:9.03:0,9,113	1/1:1,2:2:2.94:18,3,0	1/1:0,2:2:5.95:42,6,0	0/0:2,0:2:6.01:0,6,57	0/0:6,0:6:3.01:0,3,36	0/1:2,0:2:0:0,0,0	0/0:2,0:2:6.02:0,6,75	0/0:1,0:1:3.01:0,3,38	0/0:3,0:3:8.94:0,9,78	1/1:0,9:9:26.74:211,27,0	1/1:1,16:17:49.90:348,50,0	0/0:6,0:6:9.01:0,9,84	1/1:0,2:2:5.96:43,6,0
chr10	48523819	.	TAC	T	1751.21	PASS	AC=20;AF=0.385;AN=52;BaseQRankSum=8.122;DP=190;FS=27.300;HRun=0;HaplotypeScore=62.1435;InbreedingCoeff=0.8370;MQ=67.63;MQ0=4;MQRankSum=-6.166;QD=15.36;ReadPosRankSum=6.279;VQSLOD=1.1534;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:2,0:2:5.98:0,6,47	./.	0/0:4,0:4:11.91:0,12,92	0/0:6,0:4:8.93:0,9,64	1/1:10,4:13:28.21:161,28,0	0/0:3,0:3:8.98:0,9,72	0/0:2,0:2:5.99:0,6,48	1/1:15,12:25:74.36:537,74,0	./.	1/1:7,7:14:32.73:236,33,0	1/1:5,3:8:17.05:96,17,0	0/0:3,0:3:8.98:0,9,73	0/0:3,0:3:8.97:0,9,71	1/1:6,0:6:17.61:109,18,0	0/0:4,0:4:11.97:0,12,96	0/0:5,0:5:14.97:0,15,122	1/1:3,0:2:5.87:35,6,0	1/1:5,0:5:11.83:77,12,0	0/0:8,0:8:20.79:0,21,148	0/0:8,0:8:5.99:0,6,48	0/0:6,0:6:11.92:0,12,87	0/0:3,0:3:8.98:0,9,72	0/0:3,0:3:8.98:0,9,72	0/0:6,0:6:17.95:0,18,142	1/1:13,0:13:38.39:253,38,0	1/1:16,6:22:62.15:408,62,0	0/0:10,0:10:17.67:0,18,115	1/1:2,0:2:5.90:37,6,0
chr10	48524243	.	TA	T	4791.11	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=12.379;DP=609;FS=0.324;HRun=11;HaplotypeScore=62.8057;InbreedingCoeff=0.9877;MQ=72.55;MQ0=0;MQRankSum=0.762;QD=19.88;ReadPosRankSum=0.522;VQSLOD=5.7535;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:45.11:0,45,480	0/0:14,0:14:33.08:0,33,352	0/0:14,0:11:23.86:0,24,220	0/0:11,0:12:10.72:0,11,162	1/1:2,29:31:80.85:660,81,0	0/0:26,1:27:47.52:0,48,701	0/0:12,1:14:11.28:0,11,310	1/1:5,24:29:42.90:556,43,0	0/0:18,0:18:48.10:0,48,498	1/1:4,19:23:56.86:460,57,0	1/1:0,30:30:78.37:641,78,0	0/0:27,1:28:56.50:0,57,787	0/0:31,0:32:87.04:0,87,904	1/1:2,12:15:35.93:292,36,0	0/0:20,0:20:51.08:0,51,520	0/0:16,0:16:39.07:0,39,401	1/1:1,20:21:56.93:468,57,0	1/1:3,10:13:32.80:261,33,0	0/0:16,0:16:48.12:0,48,510	0/0:38,0:39:93.05:0,93,965	0/0:14,0:14:36.09:0,36,384	0/0:23,0:23:57.14:0,57,608	0/0:19,0:19:51.13:0,51,544	0/0:10,0:10:24.06:0,24,256	1/1:4,29:33:62.92:517,63,0	1/1:4,29:33:86.88:714,87,0	0/0:36,0:36:99:0,99,1039	1/1:4,9:13:26.96:222,27,0
chr10	48524803	.	GA	G	4878.52	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=11.105;DP=573;FS=3.730;HRun=12;HaplotypeScore=74.1317;InbreedingCoeff=0.8719;MQ=74.95;MQ0=2;MQRankSum=-0.926;QD=15.39;ReadPosRankSum=1.233;VQSLOD=5.8661;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,2:24:6.78:0,7,459	0/0:9,0:10:19.51:0,20,248	0/0:39,0:16:17.54:0,18,141	0/1:34,0:22:10.26:10,0,113	1/1:3,19:22:44.81:348,45,0	0/0:23,1:24:24.79:0,25,419	0/0:14,0:14:33.05:0,33,328	1/1:5,11:16:29.88:232,30,0	0/0:16,0:16:45.08:0,45,451	1/1:3,20:24:61.80:470,62,0	1/1:5,22:28:40.32:486,40,0	0/0:15,0:15:33.06:0,33,330	0/0:14,1:15:15.82:0,16,329	1/1:3,19:23:53.64:410,54,0	0/0:32,2:35:63.73:0,64,786	0/0:18,0:18:39.07:0,39,390	1/1:6,19:25:50.79:395,51,0	1/1:3,9:13:7.25:166,7,0	1/1:2,19:23:60.84:450,61,0	1/1:2,17:20:52.44:388,52,0	1/1:0,13:13:35.86:279,36,0	0/0:6,0:6:12.02:0,12,122	0/0:19,2:22:3.70:0,4,415	0/0:18,0:18:45.07:0,45,449	1/1:7,13:20:35.83:279,36,0	1/1:3,11:14:32.86:255,33,0	1/1:5,22:27:59.76:464,60,0	1/1:3,12:15:8.41:247,8,0
chr10	48526250	.	T	TA	7428.79	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-11.632;DP=551;FS=6.378;HRun=5;HaplotypeScore=50.8993;InbreedingCoeff=0.9902;MQ=71.50;MQ0=1;MQRankSum=-2.412;QD=34.71;ReadPosRankSum=0.823;VQSLOD=4.9479;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:63.12:0,63,659	0/0:6,0:6:18.05:0,18,193	0/0:9,0:9:17.41:0,17,170	0/0:9,0:9:10.42:0,10,96	1/1:2,27:29:81.26:1061,81,0	0/0:23,0:23:66.16:0,66,704	0/0:13,0:13:39.05:0,39,400	1/1:5,30:35:90.26:1142,90,0	0/0:16,0:16:45.11:0,45,484	1/1:3,26:29:78.24:1012,78,0	1/1:1,14:15:36.07:453,36,0	0/0:20,0:20:57.14:0,57,613	0/0:17,0:17:45.11:0,45,483	1/1:2,20:22:57.19:750,57,0	0/0:26,0:26:75.16:0,75,790	0/0:27,0:27:78.14:0,78,812	1/1:3,16:19:42.14:553,42,0	1/1:1,16:17:48.16:631,48,0	0/0:21,0:21:53.92:0,54,561	0/0:24,0:24:69.17:0,69,741	0/0:20,0:20:60.15:0,60,645	0/0:12,0:12:30.08:0,30,322	0/0:17,0:17:48.10:0,48,507	0/0:22,0:22:63.15:0,63,671	1/1:0,19:19:57.19:750,57,0	1/1:2,20:22:63.15:801,63,0	0/0:32,0:31:81.17:0,81,853	1/1:0,7:7:21.07:276,21,0
chr10	48526497	.	A	AT	2145.81	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=3.425;DP=228;FS=0.773;HRun=1;HaplotypeScore=35.1783;InbreedingCoeff=0.8874;MQ=71.79;MQ0=0;MQRankSum=-5.087;QD=20.05;ReadPosRankSum=1.591;VQSLOD=3.7705;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:8:20.86:0,21,159	0/0:6,0:6:17.88:0,18,144	0/0:5,0:5:13.79:0,14,102	0/0:8,0:8:16.60:0,17,147	1/1:1,19:20:38:220,38,0	0/0:12,0:12:35.66:0,36,259	0/0:6,0:6:17.92:0,18,157	1/1:0,16:16:48.09:596,48,0	0/0:5,0:5:14.87:0,15,106	1/1:0,11:11:32.85:453,33,0	1/1:0,8:8:20.48:119,20,0	0/0:7,0:7:20.89:0,21,182	0/0:6,0:6:14.83:0,15,103	1/1:0,8:8:11.73:70,12,0	0/0:4,0:4:11.87:0,12,80	0/0:5,0:5:11.47:0,11,92	1/1:0,8:8:5.90:37,6,0	1/1:1,3:4:6.02:82,6,0	0/0:11,0:11:32.94:0,33,321	0/0:7,0:7:20.77:0,21,139	0/0:2,0:2:5.93:0,6,40	0/0:6,0:6:17.83:0,18,130	0/0:9,0:9:23.74:0,24,164	0/0:2,0:2:2.84:0,3,14	1/1:0,13:13:32.32:197,32,0	1/1:2,14:16:44.12:507,44,0	0/0:12,0:12:26.92:0,27,239	1/1:3,0:3:8.98:73,9,0
chr10	48529602	.	CA	C	6468.58	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=11.448;DP=491;FS=12.535;HRun=4;HaplotypeScore=51.2290;InbreedingCoeff=0.9803;MQ=69.71;MQ0=1;MQRankSum=-1.156;QD=32.84;ReadPosRankSum=0.356;VQSLOD=4.2204;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:48.16:0,48,663	0/0:7,0:7:18.06:0,18,252	0/0:14,0:13:10.58:0,11,295	0/0:9,0:9:26.78:0,27,242	1/1:0,27:27:75.23:900,75,0	0/0:24,0:24:69.22:0,69,947	0/0:8,0:8:24.08:0,24,336	1/1:1,27:28:81.23:958,81,0	0/0:10,0:10:30.09:0,30,404	1/1:1,27:28:81.22:948,81,0	1/1:2,34:36:87.26:1036,87,0	0/0:8,0:8:24.08:0,24,336	0/0:26,0:26:78.25:0,78,1076	1/1:0,3:3:9.03:107,9,0	0/0:22,0:22:66.19:0,66,872	0/0:19,0:19:57.19:0,57,798	1/1:0,17:17:51.16:612,51,0	1/1:1,7:9:15.05:180,15,0	0/0:19,0:19:51.17:0,51,705	0/0:28,0:28:81.25:0,81,1103	0/0:11,0:11:33.09:0,33,426	0/0:13,0:13:36.11:0,36,488	0/0:26,0:26:78.26:0,78,1092	0/0:10,0:10:30.10:0,30,420	1/1:0,11:11:30.09:360,30,0	1/1:0,29:29:87.27:1043,87,0	0/0:24,0:23:72.23:0,72,991	1/1:0,9:9:27.08:324,27,0
chr10	48531488	.	G	GGA	10479.05	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=10.175;DP=658;FS=7.042;HRun=0;HaplotypeScore=119.8991;InbreedingCoeff=0.9991;MQ=72.00;MQ0=0;MQRankSum=-3.615;QD=43.66;ReadPosRankSum=0.700;VQSLOD=6.1252;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:60.12:0,60,744	0/0:10,0:10:27.09:0,27,365	0/0:35,0:33:48.69:0,49,878	0/0:19,0:18:22.88:0,23,257	1/1:25,0:25:65.94:1050,66,0	0/0:22,0:22:66.19:0,66,848	0/0:26,0:26:69.22:0,69,919	1/1:4,26:30:81.26:1376,81,0	0/0:17,0:17:45.15:0,45,609	1/1:32,0:32:78.17:1236,78,0	1/1:29,0:29:78.27:1320,78,0	0/0:16,0:16:48.16:0,48,649	0/0:27,0:27:78.26:0,78,1052	1/1:19,0:19:54.18:917,54,0	0/0:31,0:31:90.25:0,90,1144	0/0:26,0:26:69.21:0,69,902	1/1:25,0:25:72.22:1192,72,0	1/1:18,0:18:32.80:644,33,0	0/0:18,0:18:45.15:0,45,599	0/0:30,0:30:87.28:0,87,1162	0/0:18,0:18:54.18:0,54,730	0/0:16,0:16:45.15:0,45,608	0/0:25,0:25:72.23:0,72,958	0/0:28,0:28:75.24:0,75,998	1/1:26,0:26:72.21:1142,72,0	1/1:25,0:25:72.24:1201,72,0	0/0:32,0:32:81.25:0,81,1080	1/1:10,0:10:24.08:400,24,0
chr10	48531494	.	A	AG	4651.85	PASS	AB=0.701;AC=18;AF=0.321;AN=56;BaseQRankSum=17.268;DP=655;FS=5.083;HRun=1;HaplotypeScore=128.7466;InbreedingCoeff=0.7100;MQ=69.22;MQ0=0;MQRankSum=-4.165;QD=17.69;ReadPosRankSum=1.844;VQSLOD=5.2193;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:69.08:0,69,848	0/0:10,0:10:27.09:0,27,377	0/0:37,0:35:39.91:0,40,956	0/1:20,0:17:1.45:1,0,308	1/1:6,19:25:47.65:509,48,0	0/0:22,0:22:66.20:0,66,892	0/0:26,0:26:77.28:0,77,1032	1/1:29,0:28:58.04:327,58,0	0/0:15,0:15:45.15:0,45,629	0/1:9,22:31:32.62:630,0,33	0/1:7,24:31:0.69:598,0,1	0/0:16,0:16:48.16:0,48,671	0/0:26,0:26:78.26:0,78,1085	1/1:4,17:21:2.88:397,3,0	0/0:32,0:32:93.26:0,93,1221	0/0:25,0:25:72.22:0,72,972	1/1:4,21:25:66.58:606,67,0	0/1:9,10:19:46.46:272,0,46	0/0:15,0:15:45.15:0,45,629	0/0:30,0:30:90.29:0,90,1240	0/0:18,0:18:54.18:0,54,755	0/0:15,0:15:45.15:0,45,628	0/0:25,0:25:72.23:0,72,989	0/0:27,0:27:78.25:0,78,1069	1/1:7,20:27:14.19:550,14,0	1/1:3,21:25:26.70:554,27,0	0/0:29,0:29:87.28:0,87,1195	1/1:3,7:10:23.98:209,24,0
chr10	48531497	.	A	AG	4690.86	PASS	AB=0.803;AC=18;AF=0.321;AN=56;BaseQRankSum=16.984;DP=668;FS=0.000;HRun=0;HaplotypeScore=127.6219;InbreedingCoeff=0.8484;MQ=67.25;MQ0=0;MQRankSum=-5.174;QD=19.71;ReadPosRankSum=1.505;VQSLOD=6.1358;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:63.10:0,63,802	0/0:10,0:10:30.09:0,30,403	0/0:35,1:34:44.47:0,44,931	0/1:18,1:16:7.32:7,0,312	1/1:7,19:26:46.49:512,46,0	0/0:22,0:22:63.20:0,63,865	0/0:26,0:26:78.21:0,78,1055	0/0:30,0:30:87.77:0,88,695	0/0:15,0:15:45.15:0,45,629	1/1:11,22:33:47.82:660,48,0	1/1:7,24:32:70.75:727,71,0	0/0:17,0:17:48.16:0,48,671	0/0:27,0:27:81.26:0,81,1111	1/1:4,17:21:46.04:487,46,0	0/0:31,0:31:90.25:0,90,1193	0/0:24,0:24:72.22:0,72,975	1/1:3,21:24:71.85:610,72,0	0/1:9,10:19:22.42:285,0,22	0/0:17,0:17:51.15:0,51,681	0/0:31,0:31:90.29:0,90,1244	0/0:18,0:18:54.18:0,54,755	0/0:16,0:16:45.14:0,45,612	0/0:27,0:27:78.02:0,78,1027	0/0:26,0:26:75.25:0,75,1047	1/1:7,20:27:49.80:558,50,0	1/1:4,22:27:56.34:637,56,0	0/0:34,0:34:96.28:0,96,1278	1/1:3,7:10:23.98:209,24,0
chr10	48534437	.	TAAAAA	T	3560.22	PASS	AB=0.596;AC=18;AF=0.333;AN=54;BaseQRankSum=8.751;DP=310;FS=10.731;HRun=13;HaplotypeScore=59.5554;InbreedingCoeff=0.7312;MQ=52.78;MQ0=12;MQRankSum=-7.699;QD=28.03;ReadPosRankSum=0.305;VQSLOD=1.0295;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:17:38.61:0,39,939	0/0:3,0:3:9.03:0,9,260	0/0:18,0:5:10.28:0,10,71	0/0:15,0:4:4.57:0,5,61	0/1:2,18:19:38.63:586,0,39	0/0:20,0:22:48.14:0,48,1115	0/0:7,0:4:9.03:0,9,253	1/1:10,10:16:29.84:353,30,0	0/0:7,0:7:21.07:0,21,606	1/1:0,19:19:51.11:771,51,0	1/1:0,2:2:6.02:103,6,0	0/0:8,0:8:18.04:0,18,399	0/0:4,0:4:11.93:0,12,276	1/1:0,8:8:24.08:411,24,0	0/0:9,0:9:24.08:0,24,685	0/0:8,0:8:21.07:0,21,592	1/1:4,11:13:12.02:205,12,0	1/1:2,6:7:9.02:154,9,0	0/0:18,0:15:42.12:0,42,1038	0/0:13,0:13:36.06:0,36,839	./.	0/0:1,0:1:3.01:0,3,87	0/0:2,0:2:6.02:0,6,173	0/0:4,0:5:9.03:0,9,192	1/1:1,14:15:33.05:510,33,0	1/1:2,4:6:12.02:180,12,0	0/0:21,0:20:51.12:0,51,1310	0/1:7,7:12:1.59:287,0,2
chr10	48535166	.	CA	C	7526.64	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=13.679;DP=540;FS=0.329;HRun=5;HaplotypeScore=51.2260;InbreedingCoeff=0.9967;MQ=74.47;MQ0=0;MQRankSum=-2.199;QD=30.60;ReadPosRankSum=-0.082;VQSLOD=4.9491;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:69.19:0,69,922	0/0:6,0:6:15.05:0,15,205	0/0:9,0:9:24.08:0,24,328	0/0:12,0:12:36.12:0,36,477	1/1:1,27:28:72.20:817,72,0	0/0:26,0:26:78.26:0,78,1067	0/0:9,0:9:27.09:0,27,369	1/1:4,37:41:99:1237,111,0	0/0:13,0:13:36.12:0,36,492	1/1:0,23:23:69.20:783,69,0	1/1:1,23:24:69.20:780,69,0	0/0:17,0:17:48.16:0,48,656	0/0:23,0:23:60.18:0,60,786	1/1:0,15:15:45.13:511,45,0	0/0:11,0:11:33.11:0,33,451	0/0:22,0:22:66.21:0,66,887	1/1:0,28:28:78.22:884,78,0	1/1:2,18:20:45.03:510,45,0	0/0:23,0:23:66.20:0,66,876	0/0:29,0:29:87.29:0,87,1187	0/0:13,0:13:33.11:0,33,451	0/0:8,0:8:24.08:0,24,328	0/0:15,0:15:45.14:0,45,599	0/0:10,0:10:30.10:0,30,409	1/1:0,21:21:60.17:681,60,0	1/1:2,27:29:78.22:883,78,0	0/0:24,0:23:69.23:0,69,935	1/1:1,16:17:39.11:442,39,0
chr10	48538339	.	GA	G	6796.83	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=13.832;DP=577;FS=2.856;HRun=4;HaplotypeScore=54.8301;InbreedingCoeff=0.9961;MQ=88.77;MQ0=0;MQRankSum=-1.751;QD=33.32;ReadPosRankSum=0.178;VQSLOD=5.3009;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,111,1533	0/0:6,0:6:18.06:0,18,250	0/0:19,0:18:39.10:0,39,510	0/0:23,0:23:66.09:0,66,842	1/1:0,21:21:54.16:648,54,0	0/0:22,0:22:66.22:0,66,916	0/0:17,0:17:51.16:0,51,698	1/1:4,32:36:96.29:1150,96,0	0/0:14,0:14:39.13:0,39,546	1/1:0,21:21:57.17:683,57,0	1/1:0,17:17:51.15:608,51,0	0/0:18,0:18:51.16:0,51,697	0/0:14,0:14:39.13:0,39,546	1/1:0,30:30:87.27:1044,87,0	0/0:22,0:22:66.21:0,66,907	0/0:23,0:23:69.21:0,69,945	1/1:0,16:16:45.14:540,45,0	1/1:0,10:10:24.07:288,24,0	0/0:16,0:16:45.14:0,45,613	0/0:21,0:21:60.16:0,60,790	0/0:34,0:34:99:0,99,1374	0/0:19,0:19:51.13:0,51,665	0/0:15,0:15:39.13:0,39,546	0/0:20,0:20:57.19:0,57,797	1/1:1,26:27:81.25:971,81,0	1/1:1,19:20:57.17:684,57,0	0/0:29,0:29:87.29:0,87,1217	1/1:0,6:6:15.05:180,15,0
chr10	48538491	.	G	GAA	6081.73	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=-3.436;DP=522;FS=1.203;HRun=12;HaplotypeScore=72.2816;InbreedingCoeff=0.8822;MQ=74.03;MQ0=0;MQRankSum=0.267;QD=24.13;ReadPosRankSum=-3.035;VQSLOD=3.9911;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:63:0,63,583	0/0:7,0:8:8.84:0,9,129	0/0:11,0:10:4.68:0,5,53	0/1:20,0:17:37.72:42,0,38	1/1:7,21:30:61.82:868,62,0	0/0:17,0:19:44.41:0,44,385	0/0:10,0:10:21.02:0,21,194	1/1:9,12:27:52.61:608,53,0	0/0:15,0:15:39.04:0,39,361	1/1:8,8:18:32.49:342,32,0	1/1:2,23:28:67.52:786,68,0	0/0:19,0:19:32.85:0,33,344	0/0:11,0:12:32.76:0,33,289	1/1:2,13:18:32.55:408,33,0	0/0:18,0:18:48.02:0,48,443	0/0:16,0:16:39:0,39,361	1/1:2,22:27:59.68:795,60,0	1/1:3,17:22:45.14:604,45,0	0/0:21,0:22:47.60:0,48,410	0/0:25,0:26:68.56:0,69,622	0/0:5,0:5:8.96:0,9,83	0/0:12,0:13:26.83:0,27,291	0/0:9,0:10:11.83:0,12,158	0/0:15,0:15:38.91:0,39,349	1/1:4,15:22:39.12:520,39,0	1/1:5,19:25:34.40:691,34,0	0/0:26,0:26:47.77:0,48,609	1/1:1,12:15:23.49:417,23,0
chr10	48539468	.	A	AAT	13701.09	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-4.955;DP=714;FS=7.022;HRun=0;HaplotypeScore=82.1086;InbreedingCoeff=0.9998;MQ=83.28;MQ0=3;MQRankSum=-2.056;QD=48.24;ReadPosRankSum=-0.423;VQSLOD=5.6438;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:66.22:0,66,970	0/0:13,0:13:33.10:0,33,469	0/0:28,0:28:81.27:0,81,1185	0/0:12,0:12:29.68:0,30,396	1/1:0,35:34:87.30:1629,87,0	0/0:29,0:29:87.25:0,87,1222	0/0:15,0:15:45.15:0,45,663	1/1:4,43:48:99:2303,132,0	0/0:17,0:17:48.16:0,48,707	1/1:2,19:21:57.20:1066,57,0	1/1:3,30:33:81.28:1512,81,0	0/0:35,0:35:99:0,102,1482	0/0:32,0:32:96.28:0,96,1352	1/1:0,18:19:45.15:843,45,0	0/0:30,0:30:81.27:0,81,1192	0/0:29,0:29:84.27:0,84,1218	1/1:1,21:22:57.20:1068,57,0	1/1:1,20:21:60.21:1120,60,0	0/0:29,0:29:78.26:0,78,1143	0/0:28,0:28:84.28:0,84,1236	0/0:11,0:11:30.10:0,30,442	0/0:23,0:23:69.20:0,69,977	0/0:27,0:27:78.25:0,78,1125	0/0:15,0:15:45.15:0,45,663	1/1:0,28:28:72.25:1349,72,0	1/1:3,39:41:99:2026,111,0	0/0:34,0:34:99:0,102,1502	1/1:0,14:14:42.14:787,42,0
chr10	48540744	.	T	TGAGGAGACTTCTACAGGTGGTACAGG	2849.26	PASS	AB=0.650;AC=22;AF=0.917;AN=24;BaseQRankSum=-1.829;DP=47;FS=2.965;HRun=0;HaplotypeScore=44.1621;InbreedingCoeff=-0.2206;MQ=122.17;MQ0=0;MQRankSum=-1.383;QD=79.15;ReadPosRankSum=0.401;VQSLOD=2.4549;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/1:1,1:3:23.43:587,0,23	0/1:4,0:7:13.53:996,0,14	./.	1/1:3,0:3:2.99:23,3,0	1/1:6,0:6:12.04:240,12,0	1/1:3,0:3:9.02:149,9,0	./.	1/1:3,0:5:12.04:406,12,0	1/1:1,0:1:3.01:74,3,0	./.	1/1:1,0:1:3.01:48,3,0	./.	./.	./.	./.	1/1:2,0:2:3.01:57,3,0	1/1:0,0:1:3.01:132,3,0	1/1:1,0:2:6.02:200,6,0	1/1:2,0:2:2.99:24,3,0	./.	./.	./.	./.	./.	./.	./.
chr10	48542971	.	C	CA	8485.25	PASS	AB=0.875;AC=51;AF=0.944;AN=54;BaseQRankSum=-1.949;DP=234;FS=0.000;HRun=1;HaplotypeScore=128.5305;InbreedingCoeff=0.2757;MQ=57.32;MQ0=0;MQRankSum=-3.425;QD=36.73;ReadPosRankSum=1.550;VQSLOD=4.4788;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,5:6:12.04:179,12,0	1/1:1,1:2:3.01:45,3,0	0/0:2,0:2:3:0,3,28	0/1:6,1:7:30.81:31,0,54	1/1:1,11:12:30.02:398,30,0	1/1:3,11:14:33.08:469,33,0	1/1:4,6:10:24:309,24,0	1/1:4,11:15:42.14:618,42,0	1/1:2,5:7:18.02:244,18,0	1/1:1,9:10:30.10:445,30,0	1/1:1,14:15:42.10:602,42,0	1/1:0,8:8:24.08:359,24,0	1/1:1,8:9:24.05:335,24,0	1/1:1,9:10:27.09:403,27,0	1/1:0,8:8:24.04:334,24,0	1/1:2,6:8:21.04:290,21,0	1/1:1,2:3:3.01:45,3,0	1/1:0,3:3:9.03:135,9,0	1/1:1,5:6:15.05:224,15,0	1/1:1,11:12:33.11:493,33,0	./.	1/1:1,10:11:30.06:423,30,0	1/1:0,12:12:27.09:403,27,0	1/1:0,2:2:3.01:45,3,0	1/1:2,5:7:18.02:244,18,0	1/1:0,12:12:36.12:538,36,0	1/1:5,14:18:51.14:738,51,0	1/1:0,3:3:9.03:135,9,0
chr10	48542980	.	C	CA	7913.51	PASS	AB=0.778;AC=52;AF=0.963;AN=54;BaseQRankSum=-1.933;DP=238;FS=0.000;HRun=2;HaplotypeScore=119.3787;InbreedingCoeff=-0.0613;MQ=58.99;MQ0=0;MQRankSum=-3.772;QD=33.53;ReadPosRankSum=1.424;VQSLOD=4.4406;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,5:6:15.05:210,15,0	1/1:2,2:4:6.02:78,6,0	0/1:2,2:4:10.21:114,0,10	0/1:7,1:8:39.92:77,0,40	1/1:3,8:11:21.07:299,21,0	1/1:2,11:13:30.10:429,30,0	1/1:1,6:7:18.06:249,18,0	1/1:4,14:18:48.15:652,48,0	1/1:0,6:6:18.06:257,18,0	1/1:2,10:12:33.11:468,33,0	1/1:1,13:14:39.13:556,39,0	1/1:1,7:8:21.07:293,21,0	1/1:3,7:10:24.03:311,24,0	1/1:2,9:11:30.07:406,30,0	1/1:2,8:10:25.90:339,26,0	1/1:1,5:6:15.05:210,15,0	1/1:0,4:4:9.03:110,9,0	1/1:3,0:3:5.24:22,5,0	1/1:2,5:7:21.06:283,21,0	1/1:3,11:14:30.06:406,30,0	1/1:1,2:3:3.01:34,3,0	1/1:2,9:11:30.06:401,30,0	1/1:1,11:12:30.06:397,30,0	1/1:0,2:2:3.01:43,3,0	1/1:0,5:5:15.05:214,15,0	1/1:2,10:12:33.10:455,33,0	1/1:1,14:15:42.14:600,42,0	./.
chr10	48544741	.	T	TTTGC	7385.05	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=3.896;DP=576;FS=9.408;HRun=0;HaplotypeScore=105.5678;InbreedingCoeff=0.9904;MQ=72.11;MQ0=0;MQRankSum=-7.081;QD=35.85;ReadPosRankSum=-2.273;VQSLOD=3.6235;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:84.27:0,84,1393	0/0:5,0:5:12.04:0,12,205	0/0:17,0:16:33.09:0,33,522	0/0:12,0:12:36.09:0,36,542	1/1:16,17:33:42.14:849,42,0	0/0:22,0:22:48.16:0,48,819	0/0:17,0:17:45.15:0,45,764	1/1:17,11:28:45.15:998,45,0	0/0:21,0:21:54.18:0,54,921	1/1:14,14:29:45.14:1030,45,0	1/1:12,9:21:30.10:595,30,0	0/0:21,0:21:45.15:0,45,743	0/0:24,0:24:60.17:0,60,970	1/1:10,9:19:27.09:647,27,0	0/0:23,0:23:51.17:0,51,866	0/0:15,0:15:36.12:0,36,614	1/1:5,12:18:27.09:671,27,0	1/1:6,6:12:15.52:376,16,0	0/0:21,0:21:42.14:0,42,705	0/0:30,0:30:72.25:0,72,1214	0/0:19,0:19:51.16:0,51,838	0/0:17,0:17:45.15:0,45,768	0/0:18,0:18:48.15:0,48,788	0/0:24,0:24:60.21:0,60,1024	1/1:4,14:18:33.11:758,33,0	1/1:4,15:19:48.16:1085,48,0	0/0:30,0:30:63.22:0,63,1074	1/1:4,5:9:15.05:375,15,0
chr10	48544755	.	T	TG	962.46	PASS	AB=0.974;AC=12;AF=0.214;AN=56;BaseQRankSum=13.016;DP=501;FS=28.114;HRun=0;HaplotypeScore=85.2220;InbreedingCoeff=0.1915;MQ=75.40;MQ0=0;MQRankSum=-7.416;QD=7.24;ReadPosRankSum=-2.601;VQSLOD=1.3145;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:96.28:0,96,1302	0/0:6,0:6:18.06:0,18,251	0/0:25,0:24:43.85:0,44,809	0/0:20,0:20:60.17:0,60,787	0/1:18,1:19:53.85:203,0,54	0/0:20,0:20:60.19:0,60,824	0/0:16,0:16:48.16:0,48,671	0/1:12,1:13:70.30:70,0,122	0/0:22,0:22:66.21:0,66,907	0/1:15,0:15:42.44:197,0,42	1/1:13,1:14:23.20:240,23,0	0/0:17,0:17:51.14:0,51,692	0/0:25,0:25:72.23:0,72,988	0/1:10,1:11:20.90:42,0,21	0/0:23,0:23:69.23:0,69,964	0/0:16,0:16:45.14:0,45,612	0/1:18,0:18:51.52:52,0,75	0/1:7,0:7:6.89:7,0,108	0/0:19,0:19:54.17:0,54,737	0/0:28,0:28:81.23:0,81,1108	0/0:20,0:20:54.63:0,55,738	0/0:17,0:17:45.15:0,45,629	0/0:17,0:17:48.16:0,48,671	0/0:20,0:20:60.20:0,60,839	0/1:17,0:17:99:103,0,134	0/1:14,0:14:3.98:179,0,4	0/0:25,0:25:72.24:0,72,1001	1/1:5,0:5:10.19:30,10,0
chr10	48547209	.	AAAAAAGAACC	A	2308.92	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=6.008;DP=377;FS=20.106;HRun=0;HaplotypeScore=107.3303;InbreedingCoeff=0.8544;MQ=53.16;MQ0=10;MQRankSum=-3.876;QD=17.10;ReadPosRankSum=-3.740;VQSLOD=-0.1573;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:41:99:0,108,3993	0/0:5,0:5:15.03:0,15,568	0/0:5,0:4:11.99:0,12,216	0/0:9,0:6:7.91:0,8,167	1/1:11,1:11:15.03:205,15,0	0/0:12,0:12:30.07:0,30,1288	0/0:10,0:10:18.05:0,18,805	1/1:18,0:14:17.37:140,17,0	0/0:10,0:10:27.02:0,27,1095	1/1:10,0:10:23.94:336,24,0	1/1:7,12:18:24.08:477,24,0	0/0:8,0:8:12:0,12,500	0/0:14,0:13:17.93:0,18,681	1/1:4,5:9:14.98:232,15,0	0/0:12,0:12:27.05:0,27,975	0/0:9,0:9:27.08:0,27,1013	1/1:14,2:14:25.33:416,25,0	0/1:19,0:17:6.73:92,0,7	0/0:20,0:17:48.11:0,48,1395	0/0:19,0:19:51.12:0,51,1909	0/0:6,0:6:14:0,14,417	0/0:11,0:11:24.08:0,24,843	0/0:13,0:12:23.90:0,24,815	0/0:18,0:17:30.01:0,30,996	1/1:10,0:9:5.99:61,6,0	1/1:16,1:16:33.82:461,34,0	0/0:19,0:18:39.05:0,39,1365	1/1:1,4:4:3.01:92,3,0
chr10	48547210	.	AAAAAGAACC	A	2569.32	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=5.499;DP=378;FS=19.560;HRun=0;HaplotypeScore=101.4092;InbreedingCoeff=0.8613;MQ=53.37;MQ0=10;MQRankSum=-3.447;QD=17.60;ReadPosRankSum=-3.938;VQSLOD=-0.5697;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:41:99:0,108,3601	0/0:5,0:5:15.03:0,15,514	0/0:6,0:5:14.73:0,15,206	0/1:10,0:6:4.44:4,0,133	1/1:2,10:11:15.03:251,15,0	0/0:11,0:11:30.10:0,30,1168	0/0:10,0:10:18.05:0,18,725	1/1:19,0:15:23.81:264,24,0	0/0:11,0:11:30.01:0,30,1069	1/1:1,9:10:23.67:353,24,0	1/1:19,0:18:24.08:472,24,0	0/0:8,0:8:11.99:0,12,446	0/0:14,0:13:17.90:0,18,608	1/1:8,1:9:15.02:235,15,0	0/0:12,0:12:27.04:0,27,878	0/0:9,0:9:27.08:0,27,919	1/1:16,0:14:25.17:437,25,0	1/1:7,12:17:5.30:122,5,0	0/0:19,0:17:48.09:0,48,1277	0/0:19,0:19:51.10:0,51,1704	0/0:6,0:6:13.19:0,13,370	0/0:11,0:11:24.08:0,24,762	0/0:13,0:12:23.87:0,24,726	0/0:18,0:17:29.98:0,30,869	1/1:2,8:9:6.02:80,6,0	1/1:3,14:16:34.42:482,34,0	0/0:18,0:17:39.07:0,39,1235	1/1:5,0:4:3.01:77,3,0
chr10	48547212	.	AAAGAACC	A	2843.99	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=4.592;DP=370;FS=13.802;HRun=0;HaplotypeScore=88.1834;InbreedingCoeff=0.8635;MQ=53.64;MQ0=8;MQRankSum=-3.898;QD=20.17;ReadPosRankSum=-4.861;VQSLOD=0.1525;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:41:99:0,108,2919	0/0:5,0:5:15.03:0,15,413	0/0:6,0:5:7.72:0,8,139	0/1:10,0:6:4.84:5,0,88	1/1:12,0:11:15.04:236,15,0	0/0:11,0:11:30.10:0,30,949	0/0:9,0:9:18.06:0,18,578	1/1:7,11:16:27.07:467,27,0	0/0:12,0:12:32.99:0,33,924	1/1:10,0:10:24.04:371,24,0	1/1:18,0:17:24.08:453,24,0	0/0:9,0:9:18.06:0,18,440	0/0:14,0:13:17.85:0,18,483	1/1:9,0:9:15.03:238,15,0	0/0:11,0:11:27.09:0,27,700	0/0:9,0:9:27.08:0,27,747	1/1:15,0:13:28.72:504,29,0	1/1:18,0:16:9.02:128,9,0	0/0:19,0:17:48.06:0,48,1065	0/0:19,0:19:54.16:0,54,1346	0/0:6,0:6:11.88:0,12,272	0/0:11,0:11:24.08:0,24,613	0/0:12,0:11:23.89:0,24,572	0/0:17,0:16:29.99:0,30,652	1/1:10,0:9:6.02:101,6,0	1/1:16,0:15:34.42:485,34,0	0/0:17,0:16:39.07:0,39,1002	1/1:5,0:4:3.01:65,3,0
chr10	48547214	.	AGAACC	A	2997.26	PASS	AB=0.909;AC=21;AF=0.375;AN=56;BaseQRankSum=4.123;DP=367;FS=7.981;HRun=0;HaplotypeScore=77.8653;InbreedingCoeff=0.8505;MQ=54.05;MQ0=8;MQRankSum=-3.504;QD=22.20;ReadPosRankSum=-5.635;VQSLOD=0.9634;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:42:99:0,108,2404	0/0:5,0:5:15.03:0,15,328	0/0:6,0:5:7.64:0,8,103	0/1:9,0:6:13.19:13,0,52	1/1:11,0:11:15.04:227,15,0	0/0:12,0:12:33.11:0,33,852	0/0:9,0:9:18.06:0,18,466	1/1:12,2:12:27.07:469,27,0	0/0:12,0:12:32.99:0,33,754	1/1:9,1:10:24.06:372,24,0	1/1:15,3:17:24.08:429,24,0	0/0:9,0:9:18.06:0,18,339	0/0:12,0:11:18.05:0,18,375	1/1:7,2:9:15.02:237,15,0	0/0:13,0:13:32.85:0,33,628	0/0:9,0:9:27.08:0,27,616	1/1:13,5:16:38.14:674,38,0	1/1:14,0:13:9.03:145,9,0	0/0:19,0:17:50:0,50,906	0/0:19,0:19:54.12:0,54,1012	0/0:7,0:7:13.93:0,14,219	0/0:11,0:11:24.07:0,24,494	0/0:12,0:11:27.02:0,27,481	0/0:16,0:15:28.89:0,29,444	1/1:10,0:9:6.02:103,6,0	1/1:16,0:15:35.09:488,35,0	0/0:18,0:17:41.96:0,42,829	1/1:5,0:4:3.01:51,3,0
chr10	48547927	.	AAT	A	4153.84	PASS	AB=0.832;AC=32;AF=0.593;AN=54;BaseQRankSum=5.980;DP=319;FS=4.319;HRun=0;HaplotypeScore=55.4506;InbreedingCoeff=0.4811;MQ=82.57;MQ0=2;MQRankSum=1.105;QD=17.53;ReadPosRankSum=4.794;VQSLOD=3.3560;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:3,0:6:9:0,9,79	0/0:6,0:6:12.04:0,12,193	0/0:12,0:11:3.34:0,3,26	0/1:13,0:10:5.91:6,0,36	1/1:4,7:13:23.74:245,24,0	0/1:14,2:15:0.10:0,0,468	./.	0/0:28,0:39:86.72:0,87,1048	0/0:4,0:4:6.02:0,6,96	1/1:1,8:10:26.91:304,27,0	1/1:4,7:12:23.91:267,24,0	0/1:9,1:10:12.12:12,0,313	1/1:3,3:6:9.03:109,9,0	1/1:2,4:6:9.03:109,9,0	0/0:9,0:9:9.03:0,9,144	0/1:5,2:7:57.25:57,0,130	1/1:4,17:22:50.99:593,51,0	1/1:3,10:13:27.05:310,27,0	1/1:5,7:12:21.05:241,21,0	1/1:3,12:15:23.86:251,24,0	1/1:2,5:7:12.04:145,12,0	0/0:2,0:2:3.01:0,3,48	0/1:4,1:5:30.17:30,0,42	0/0:3,0:3:9.03:0,9,139	1/1:5,17:22:39.12:471,39,0	1/1:3,12:15:33.10:397,33,0	0/1:5,11:18:12.53:318,0,13	1/1:5,9:14:24.07:290,24,0
chr10	48548284	.	T	TGG	2725.37	PASS	AB=0.902;AC=22;AF=0.393;AN=56;BaseQRankSum=-0.450;DP=699;FS=8.234;HRun=2;HaplotypeScore=99.8337;InbreedingCoeff=0.6458;MQ=61.30;MQ0=47;MQRankSum=-1.629;QD=12.11;ReadPosRankSum=-2.780;VQSLOD=-0.6630;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:75.34:0,75,809	0/0:2,0:2:5.99:0,6,48	0/0:88,0:16:31.49:0,31,297	0/0:80,0:21:53.96:0,54,512	1/1:13,0:12:14.84:100,15,0	0/0:14,0:13:27.63:0,28,293	0/0:28,0:28:65.65:0,66,645	1/1:34,0:34:92.91:815,93,0	0/0:19,0:19:47.77:0,48,464	1/1:21,0:23:58.61:539,59,0	1/1:12,0:12:23.51:291,24,0	0/1:18,0:17:26.54:27,0,154	0/0:19,0:19:17.97:0,18,285	1/1:13,1:14:6.02:92,6,0	0/0:16,0:16:41.72:0,42,393	0/0:25,0:25:62.98:0,63,629	1/1:1,26:27:7.27:114,7,0	1/1:15,0:16:21.66:347,22,0	0/0:21,0:19:48.36:0,48,410	0/0:9,0:8:23.82:0,24,183	0/0:68,0:66:77.10:0,77,818	0/1:12,0:12:11.10:11,0,100	0/1:9,0:9:7.62:8,0,61	0/0:39,0:39:33.20:0,33,556	1/1:12,0:12:2.10:43,2,0	1/1:17,0:17:47.75:368,48,0	0/0:10,0:9:23.65:0,24,201	0/1:6,11:16:9.04:172,0,9
chr10	48548285	.	G	GGGGT	3014.84	PASS	AB=0.826;AC=18;AF=0.321;AN=56;BaseQRankSum=-1.493;DP=725;FS=4.289;HRun=0;HaplotypeScore=125.8877;InbreedingCoeff=0.6361;MQ=59.66;MQ0=48;MQRankSum=-2.109;QD=14.22;ReadPosRankSum=-2.986;VQSLOD=2.9592;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:74.17:0,74,936	0/0:2,0:2:5.99:0,6,48	0/0:87,0:15:31.16:0,31,295	0/0:79,0:20:53.96:0,54,512	1/1:5,10:16:14.84:100,15,0	0/0:13,0:14:35.90:0,36,356	0/0:27,0:27:68.54:0,69,777	1/1:33,0:33:92.91:815,93,0	0/0:17,0:19:47.90:0,48,547	1/1:25,0:24:61.61:611,62,0	1/1:13,0:13:10.52:300,11,0	0/1:18,0:18:10.91:11,0,186	0/0:14,0:19:11.28:0,11,294	1/1:4,8:14:8.86:163,9,0	0/0:17,0:17:44.94:0,45,476	0/0:23,0:26:41.28:0,41,783	1/1:27,0:27:8.99:93,9,0	0/1:14,2:16:8.37:413,0,8	0/0:17,0:18:48.38:0,48,438	0/0:9,0:8:23.84:0,24,202	0/0:54,0:78:63.45:0,63,804	0/0:11,0:14:17.16:0,17,163	0/0:6,0:9:8.50:0,8,72	0/0:30,0:43:74.42:0,74,662	0/1:3,8:12:10.17:91,0,10	1/1:19,0:19:44.73:417,45,0	0/0:9,0:8:23.35:0,23,213	0/1:15,2:16:66.41:194,0,66
chr10	48548923	.	CTGTATATTATACACTGT	C	1082.27	PASS	AC=10;AF=0.250;AN=40;BaseQRankSum=5.470;DP=446;FS=3.624;HRun=0;HaplotypeScore=173.8629;InbreedingCoeff=0.7757;MQ=52.99;MQ0=19;MQRankSum=3.326;QD=12.30;ReadPosRankSum=-0.136;VQSLOD=2.0120;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:9.01:0,9,199	0/0:17,0:17:33.11:0,33,718	./.	./.	./.	0/0:19,0:19:36.03:0,36,514	0/0:7,0:7:9.03:0,9,144	./.	0/0:29,0:29:42.13:0,42,984	0/0:12,0:7:2.45:0,2,22	0/0:14,0:8:2.94:0,3,18	0/0:31,0:31:60.19:0,60,1376	0/0:27,0:27:44.96:0,45,664	./.	0/0:39,0:39:75.22:0,75,1401	0/0:25,0:25:36.12:0,36,775	./.	./.	1/1:8,5:11:11.95:137,12,0	1/1:9,19:25:23.81:241,24,0	1/1:17,0:16:12.01:173,12,0	0/0:24,0:24:42.11:0,42,778	0/0:18,0:17:30.09:0,30,520	0/0:17,0:17:36.09:0,36,674	./.	0/0:12,0:10:2.97:0,3,20	1/1:28,0:28:45.08:670,45,0	1/1:2,0:1:0.47:1,0,0
chr10	48549219	.	GTATACATTGTTGTATAT	G	4664.05	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=14.640;DP=612;FS=1.619;HRun=0;HaplotypeScore=267.1897;InbreedingCoeff=0.9542;MQ=57.26;MQ0=13;MQRankSum=0.103;QD=21.39;ReadPosRankSum=-1.659;VQSLOD=3.4737;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:7:21.02:0,21,355	0/0:16,0:16:39.04:0,39,665	0/0:4,0:4:5.85:0,6,44	0/0:1,0:1:2.99:0,3,23	1/1:1,18:17:14.60:88,15,0	0/0:31,0:31:78.11:0,78,1386	0/0:11,0:11:30.02:0,30,355	1/1:32,0:20:45.01:400,45,0	0/0:25,0:25:32.07:0,32,804	1/1:10,30:38:86.77:853,87,0	1/1:14,0:9:20.81:154,21,0	0/0:29,0:29:84.14:0,84,1421	0/0:24,0:24:62.97:0,63,1023	1/1:23,0:21:38.81:463,39,0	0/0:28,0:28:78.15:0,78,1316	0/0:32,0:31:84.19:0,84,1621	1/1:18,0:18:44.79:727,45,0	1/1:11,0:11:29.82:323,30,0	0/0:18,0:18:42:0,42,510	0/0:52,0:52:99:0,144,2424	0/0:24,0:24:60.04:0,60,984	0/0:23,0:23:65.93:0,66,1013	0/0:22,0:22:60.08:0,60,1120	0/0:10,0:10:27.07:0,27,572	1/1:16,0:15:35.99:437,36,0	1/1:5,29:33:74.92:770,75,0	0/0:37,0:35:93.03:0,93,1300	1/1:11,0:11:30.03:452,30,0
chr10	48552008	.	G	GTAT	8021.50	PASS	AB=0.800;AC=21;AF=0.375;AN=56;BaseQRankSum=7.244;DP=370;FS=3.914;HRun=0;HaplotypeScore=68.9531;InbreedingCoeff=0.8822;MQ=62.65;MQ0=0;MQRankSum=-3.098;QD=43.83;ReadPosRankSum=0.534;VQSLOD=5.9950;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:30.10:0,30,460	0/0:5,0:5:12.04:0,12,184	0/1:3,0:4:2.85:3,0,29	0/0:3,0:3:9.02:0,9,110	1/1:6,16:23:42.14:887,42,0	0/0:25,0:25:60.18:0,60,882	0/0:5,0:5:12.04:0,12,184	1/1:7,34:42:99:2124,105,0	0/0:10,0:10:30.10:0,30,458	1/1:4,11:17:39.11:753,39,0	1/1:4,10:14:27.05:531,27,0	0/0:11,0:11:21.07:0,21,322	0/0:12,0:12:36.12:0,36,552	1/1:3,8:11:18.06:384,18,0	0/0:17,0:17:45.14:0,45,666	0/0:10,0:10:27.08:0,27,393	1/1:1,14:16:33.11:704,33,0	1/1:1,9:10:24.08:512,24,0	0/0:25,0:25:69.22:0,69,1024	0/0:15,0:15:36.09:0,36,507	0/0:4,0:4:6.02:0,6,92	0/0:3,0:3:6.02:0,6,92	0/0:8,0:8:21.06:0,21,301	0/0:3,0:3:6.02:0,6,92	1/1:1,7:8:15.05:320,15,0	1/1:5,15:20:45.15:917,45,0	0/0:19,0:19:48.13:0,48,688	1/1:3,15:18:42.14:886,42,0
chr10	48552358	.	C	CA	7601.73	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-7.093;DP=597;FS=15.648;HRun=1;HaplotypeScore=58.9413;InbreedingCoeff=0.9996;MQ=88.49;MQ0=0;MQRankSum=-2.419;QD=40.01;ReadPosRankSum=2.863;VQSLOD=3.7314;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,102,1306	0/0:11,0:11:33.11:0,33,429	0/0:26,0:26:72.15:0,72,866	0/0:18,0:18:47.74:0,48,591	1/1:1,27:28:72.24:1079,72,0	0/0:19,0:19:57.19:0,57,739	0/0:9,0:9:27.09:0,27,350	0/0:35,0:35:99:0,102,1322	0/0:16,0:16:45.15:0,45,583	1/1:2,22:24:66.19:942,66,0	1/1:1,16:17:45.11:649,45,0	0/0:27,0:27:78.24:0,78,997	0/0:24,0:24:69.22:0,69,895	1/1:0,21:21:57.19:854,57,0	0/0:34,0:34:99:0,102,1294	0/0:19,0:19:57.17:0,57,726	1/1:2,19:21:45.15:675,45,0	1/1:0,15:15:42.14:630,42,0	0/0:17,0:17:51.12:0,51,629	0/0:20,0:20:60.20:0,60,779	0/0:17,0:17:45.15:0,45,583	0/0:10,0:10:27.09:0,27,350	0/0:25,0:25:75.24:0,75,971	0/0:15,0:15:45.15:0,45,584	1/1:1,17:18:51.17:760,51,0	1/1:0,28:28:84.28:1249,84,0	0/0:30,0:30:87.28:0,87,1127	1/1:0,18:18:51:764,51,0
chr10	48552638	.	GA	G	5195.94	PASS	AB=0.723;AC=20;AF=0.357;AN=56;BaseQRankSum=4.502;DP=627;FS=13.267;HRun=10;HaplotypeScore=73.5429;InbreedingCoeff=0.8761;MQ=70.48;MQ0=0;MQRankSum=-1.519;QD=19.53;ReadPosRankSum=1.416;VQSLOD=4.7741;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:75.20:0,75,828	0/1:8,1:9:1.98:2,0,208	0/0:20,0:18:37.26:0,37,380	0/0:17,0:17:30.75:0,31,348	1/1:5,29:35:82.78:696,83,0	0/0:16,0:16:42.11:0,42,465	0/0:21,0:21:51.12:0,51,555	1/1:7,26:33:77.92:672,78,0	0/0:19,0:19:45.09:0,45,477	1/1:5,22:27:67.54:576,68,0	1/1:5,21:26:16.58:358,17,0	0/0:18,0:18:45.12:0,45,496	0/0:20,0:20:54.15:0,54,597	1/1:2,25:27:65.98:573,66,0	0/0:27,0:27:72.15:0,72,783	0/0:14,0:14:12.56:0,13,348	1/1:0,18:18:41.99:365,42,0	0/1:3,15:18:9.33:294,0,9	0/0:3,0:18:38.52:0,39,192	0/0:6,0:33:69.25:0,69,389	0/0:3,0:19:34.27:0,34,180	0/0:15,0:15:33.07:0,33,350	0/0:26,0:26:70.73:0,71,759	0/0:20,0:20:48.13:0,48,531	1/1:0,17:17:47.99:417,48,0	1/1:3,30:33:83.94:723,84,0	0/0:5,0:30:68.34:0,68,367	1/1:1,22:23:59.99:521,60,0
chr10	48553205	.	CAAAA	C	6396.21	PASS	AB=0.514;AC=27;AF=0.482;AN=56;BaseQRankSum=0.323;DP=439;FS=1.367;HRun=13;HaplotypeScore=93.3676;InbreedingCoeff=0.8571;MQ=76.37;MQ0=4;MQRankSum=-3.300;QD=25.58;ReadPosRankSum=4.097;VQSLOD=3.9909;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:18:51.17:0,51,1128	0/0:0,0:6:15.05:0,15,287	0/0:33,0:16:19.53:0,20,272	0/0:24,0:15:29.59:0,30,295	1/1:3,29:31:81.08:1129,81,0	0/0:16,0:16:48.16:0,48,1088	0/0:12,0:13:36.12:0,36,797	1/1:5,19:25:60.15:807,60,0	0/0:7,0:8:24.07:0,24,488	1/1:3,21:23:60.15:859,60,0	1/1:3,23:26:69.14:983,69,0	0/0:1,0:9:12.03:0,12,197	0/0:4,0:18:21.07:0,21,376	1/1:4,10:15:21.52:308,22,0	0/0:4,0:9:24.08:0,24,491	0/0:0,0:11:27.08:0,27,336	1/1:1,20:21:48.15:702,48,0	1/1:2,5:7:6.02:88,6,0	0/1:1,1:19:12.58:60,0,13	1/1:3,2:22:12.19:119,12,0	1/1:0,0:3:2.49:7,2,0	0/0:2,0:4:9.03:0,9,187	0/0:2,0:13:29.66:0,30,473	0/0:1,0:5:9.03:0,9,172	1/1:1,14:15:33.11:483,33,0	1/1:3,17:20:48.03:636,48,0	1/1:2,1:17:18.84:85,19,0	1/1:1,3:4:9.03:132,9,0
chr10	48553393	.	TTTATTTATTTAC	T	10675.33	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=10.361;DP=428;FS=10.269;HRun=0;HaplotypeScore=144.4431;InbreedingCoeff=0.9048;MQ=56.64;MQ0=3;MQRankSum=-2.912;QD=43.75;ReadPosRankSum=-0.951;VQSLOD=3.8219;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:66.16:0,66,2408	0/0:4,0:4:12.04:0,12,457	0/0:6,0:3:6.49:0,6,124	0/0:8,0:5:12:0,12,179	1/1:3,34:37:89.74:2295,90,0	0/0:15,0:15:45.13:0,45,2267	0/0:2,0:2:6:0,6,72	1/1:3,40:43:99:1354,102,0	0/0:7,0:7:18.04:0,18,670	1/1:0,26:26:72.15:1779,72,0	1/1:0,22:22:53.77:1227,54,0	0/0:7,0:7:18.04:0,18,929	0/0:14,0:14:42.02:0,42,1480	1/1:0,21:21:18.06:674,18,0	0/0:13,0:13:39.13:0,39,2169	0/0:15,0:15:42.08:0,42,1897	1/1:1,16:17:7.25:238,7,0	1/1:0,14:14:6.02:225,6,0	0/0:19,0:19:51.16:0,51,1780	0/0:8,0:8:24.05:0,24,846	0/0:9,0:9:24.08:0,24,825	0/0:5,0:5:12.02:0,12,449	0/0:5,0:5:15.05:0,15,662	0/0:3,0:3:9.01:0,9,321	1/1:1,16:17:9.03:292,9,0	1/1:0,23:23:69.07:1692,69,0	0/0:22,0:22:54.17:0,54,2622	1/1:7,17:22:24.08:899,24,0
chr10	48553401	.	T	TTTAC	1742.37	PASS	AC=8;AF=0.148;AN=54;BaseQRankSum=-8.061;DP=432;FS=3.683;HRun=0;HaplotypeScore=116.7825;InbreedingCoeff=0.7978;MQ=54.39;MQ0=3;MQRankSum=2.620;QD=28.10;ReadPosRankSum=2.246;VQSLOD=3.6718;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:47.94:0,48,584	./.	0/0:9,0:6:5.10:0,5,81	0/0:8,0:5:9.02:0,9,93	0/0:34,0:34:65.87:0,66,532	0/0:15,0:15:36.07:0,36,474	0/0:2,0:2:5.99:0,6,50	0/0:42,0:42:53.72:0,54,413	0/0:7,0:7:8.75:0,9,86	0/0:26,0:26:45.03:0,45,408	0/0:22,0:22:28.66:0,29,228	0/0:6,0:6:18.04:0,18,244	0/0:16,0:16:33.03:0,33,391	0/0:21,0:21:17.70:0,18,151	0/0:18,0:18:51.07:0,51,641	0/0:16,0:16:39.02:0,39,472	0/0:17,0:17:8.17:0,8,72	0/0:14,0:14:6.01:0,6,56	1/1:9,8:17:24.05:487,24,0	1/1:3,5:10:14.88:253,15,0	1/1:5,5:10:9.03:219,9,0	0/0:4,0:4:9.02:0,9,123	0/0:5,0:5:9.03:0,9,147	0/0:5,0:5:14.98:0,15,145	0/0:16,0:16:8.91:0,9,66	0/0:23,0:23:44.95:0,45,397	1/1:5,18:25:39.13:934,39,0	0/0:19,0:17:24.03:0,24,223
chr10	48553823	.	TA	T	5066.29	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=12.540;DP=564;FS=7.913;HRun=9;HaplotypeScore=57.0899;InbreedingCoeff=0.9945;MQ=80.12;MQ0=0;MQRankSum=-4.337;QD=22.42;ReadPosRankSum=-0.324;VQSLOD=5.3711;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,1:20:20.66:0,21,482	0/0:7,0:7:21.06:0,21,242	0/0:14,0:15:33.09:0,33,373	0/0:16,1:17:13.40:0,13,340	1/1:4,25:29:71.99:650,72,0	0/0:24,1:24:38.72:0,39,691	0/0:15,0:15:33.10:0,33,381	1/1:4,35:39:70.39:884,70,0	0/0:15,0:15:39.12:0,39,450	1/1:1,28:29:84.05:769,84,0	1/1:4,17:21:45.01:412,45,0	0/0:20,0:20:54.15:0,54,614	0/0:24,0:24:66.20:0,66,762	1/1:2,14:16:33.01:302,33,0	0/0:25,0:25:66.20:0,66,762	0/0:20,0:20:60.16:0,60,674	1/1:4,17:22:50.03:439,50,0	1/1:3,9:12:20.96:184,21,0	0/0:20,0:20:54.11:0,54,601	0/0:19,0:19:51.14:0,51,580	0/0:19,0:19:51.15:0,51,586	0/0:13,0:13:36.11:0,36,415	0/0:13,0:13:33.10:0,33,381	0/0:23,0:23:60.17:0,60,683	1/1:0,17:17:45.01:412,45,0	1/1:2,22:24:60.03:549,60,0	0/0:28,0:28:69.16:0,69,781	1/1:0,17:17:51.03:467,51,0
chr10	48553988	.	G	GAGAGGC	4902.42	PASS	AC=28;AF=0.519;AN=54;BaseQRankSum=2.678;DP=484;FS=3.482;HRun=0;HaplotypeScore=127.8726;InbreedingCoeff=0.8685;MQ=73.50;MQ0=3;MQRankSum=-9.945;QD=22.70;ReadPosRankSum=-2.168;VQSLOD=4.1702;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:27.09:0,27,549	./.	0/0:21,0:15:3.01:0,3,44	0/0:26,0:23:9.03:0,9,122	1/1:17,0:17:3.01:56,3,0	0/0:14,0:14:21.07:0,21,427	0/0:28,0:28:42.14:0,42,800	1/1:20,0:20:21.06:348,21,0	0/0:10,0:10:21.07:0,21,427	1/1:17,0:17:21.03:319,21,0	1/1:11,0:11:3.48:31,3,0	0/0:20,0:20:45.15:0,45,881	0/0:26,0:26:51.16:0,51,947	1/1:19,0:19:15.05:261,15,0	0/0:17,0:17:30.10:0,30,576	0/0:27,0:27:51.16:0,51,983	1/1:15,0:14:21.07:424,21,0	1/1:7,0:7:6.02:129,6,0	1/1:10,6:16:21.07:678,21,0	1/1:10,6:17:12.04:328,12,0	1/1:12,6:18:12.04:328,12,0	0/0:16,0:16:21.07:0,21,410	0/0:19,0:19:30.09:0,30,572	0/0:16,0:16:18.06:0,18,366	1/1:10,0:10:12.02:220,12,0	1/1:21,0:19:21.54:350,22,0	1/1:8,17:25:39.11:1257,39,0	1/1:3,0:3:6.02:172,6,0
chr10	48554024	.	C	CAG	1175.69	PASS	AB=0.834;AC=11;AF=0.196;AN=56;BaseQRankSum=1.701;DP=427;FS=1.289;HRun=0;HaplotypeScore=90.9584;InbreedingCoeff=-0.2458;MQ=62.58;MQ0=8;MQRankSum=-7.293;QD=8.28;ReadPosRankSum=-2.042;VQSLOD=3.0719;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:69.22:0,69,996	0/0:2,0:2:3.01:0,3,44	0/0:21,0:15:17.06:0,17,317	0/0:28,0:20:30:0,30,446	0/1:11,4:16:38.14:38,0,202	0/0:15,0:15:45.15:0,45,658	0/0:28,0:28:78.25:0,78,1130	0/1:13,6:16:99:324,0,185	0/0:12,0:12:36.12:0,36,530	0/1:11,3:13:99:133,0,361	0/1:10,2:12:43.15:43,0,239	0/0:19,0:19:54.18:0,54,795	0/0:21,0:21:57.18:0,57,817	0/0:10,3:14:27.09:0,27,396	0/0:17,0:17:51.17:0,51,749	0/0:21,0:21:57.19:0,57,839	0/1:4,5:9:99:126,0,155	0/1:2,2:4:35.87:55,0,36	0/1:17,1:16:82.87:83,0,349	0/1:10,0:10:31.28:31,0,197	0/0:15,0:15:11.65:0,12,379	0/0:9,0:8:21.07:0,21,309	0/0:13,0:13:33.11:0,33,486	0/0:17,0:17:12.30:0,12,649	0/0:7,0:6:15.05:0,15,221	0/1:6,3:9:99:235,0,149	0/1:26,0:26:99:250,0,244	0/1:4,0:4:0.67:1,0,121
chr10	48554038	.	AT	A	1357.23	PASS	AB=0.667;AC=19;AF=0.339;AN=56;BaseQRankSum=11.201;DP=405;FS=4.100;HRun=9;HaplotypeScore=75.7609;InbreedingCoeff=0.8471;MQ=67.77;MQ0=2;MQRankSum=-10.621;QD=18.59;ReadPosRankSum=-1.338;VQSLOD=3.6106;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:28:81.03:0,81,883	0/0:2,0:2:6.02:0,6,69	0/0:32,0:16:24.43:0,24,202	0/0:32,0:23:7.26:0,7,287	1/1:1,10:11:17.97:156,18,0	0/0:20,0:20:60.06:0,60,663	0/0:25,0:25:63.17:0,63,717	1/1:2,5:6:15.01:137,15,0	0/0:12,0:12:33.10:0,33,381	1/1:1,12:13:39.02:356,39,0	1/1:0,8:8:23.85:199,24,0	0/0:16,0:16:48.14:0,48,554	0/0:16,0:16:39.11:0,39,442	1/1:1,9:10:24.39:202,24,0	0/0:16,0:16:45.13:0,45,519	0/0:20,0:20:57.17:0,57,658	0/1:2,2:4:22.34:46,0,22	1/1:0,1:1:3:27,3,0	0/0:19,0:20:51.08:0,51,570	0/0:8,0:8:21.06:0,21,239	0/0:13,0:13:30.09:0,30,341	0/0:8,0:8:18.03:0,18,195	0/0:14,0:14:39.12:0,39,450	0/0:21,0:21:63.19:0,63,727	1/1:0,9:9:26.91:221,27,0	1/1:0,5:5:15.01:136,15,0	0/0:28,0:27:69.20:0,69,793	1/1:1,4:5:9:82,9,0
chr10	48554050	.	TTTTTTTC	T	2587.33	PASS	AC=16;AF=0.308;AN=52;BaseQRankSum=9.955;DP=448;FS=0.000;HRun=0;HaplotypeScore=123.0220;InbreedingCoeff=0.9343;MQ=67.74;MQ0=5;MQRankSum=-9.951;QD=35.44;ReadPosRankSum=-1.025;VQSLOD=3.0055;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:81.28:0,81,2729	0/0:3,0:3:9.03:0,9,331	0/0:40,0:15:15.25:0,15,426	0/0:36,0:25:25.29:0,25,846	1/1:8,6:14:21.07:364,21,0	0/0:21,0:21:54.16:0,54,1643	0/0:22,0:22:51.17:0,51,1797	./.	0/0:13,0:13:39.13:0,39,1369	1/1:7,8:15:30.10:677,30,0	1/1:3,5:8:21.03:361,21,0	0/0:18,0:18:39.12:0,39,1209	0/0:16,0:16:45.15:0,45,1474	1/1:3,6:9:22.56:418,23,0	0/0:18,0:18:45.15:0,45,1560	0/0:20,0:20:54.17:0,54,1618	1/1:5,0:5:3.01:60,3,0	./.	0/0:25,0:22:39.11:0,39,1096	0/0:8,0:8:21.06:0,21,554	0/0:12,0:12:21.05:0,21,545	0/0:8,0:8:15.05:0,15,446	0/0:18,0:18:39.12:0,39,1349	0/0:26,0:26:69.24:0,69,2480	1/1:6,5:11:24.08:467,24,0	1/1:3,2:5:9.03:175,9,0	0/0:35,0:34:81.14:0,81,2696	1/1:3,3:6:12.04:257,12,0
chr10	48554057	.	C	CCT	1041.26	PASS	AB=0.773;AC=8;AF=0.148;AN=54;BaseQRankSum=9.410;DP=451;FS=2.796;HRun=0;HaplotypeScore=94.9295;InbreedingCoeff=-0.0884;MQ=65.46;MQ0=5;MQRankSum=-8.706;QD=14.07;ReadPosRankSum=0.758;VQSLOD=3.0216;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:90.24:0,90,1356	0/0:4,0:4:12.04:0,12,195	0/0:38,0:13:23.40:0,23,250	0/0:40,0:24:40.97:0,41,550	0/1:10,5:15:39.74:282,0,40	0/0:19,0:19:57.12:0,57,821	0/0:24,0:24:69.16:0,69,1020	0/0:4,0:4:12:0,12,103	0/0:17,0:17:51.17:0,51,824	0/1:13,2:15:39.02:190,0,39	0/1:7,0:9:10:75,0,10	0/0:16,0:16:48.14:0,48,698	0/0:18,0:18:48.16:0,48,775	0/1:6,0:8:13.36:62,0,13	0/0:17,0:17:51.16:0,51,785	0/0:21,0:21:60.18:0,60,950	0/1:2,1:4:29.83:51,0,30	./.	0/0:21,0:18:50.94:0,51,732	0/0:10,0:10:30.10:0,30,449	0/0:10,0:10:21.07:0,21,335	0/0:9,0:9:24.08:0,24,384	0/0:17,0:17:48.15:0,48,724	0/0:26,0:26:78.24:0,78,1229	0/1:9,2:12:32.99:314,0,33	0/1:3,1:5:11.84:84,0,12	0/0:34,0:33:93.08:0,93,1369	0/1:4,2:6:7.45:117,0,7
chr10	48554153	.	AG	A	13047	PASS	AB=0.790;AC=54;AF=0.964;AN=56;BaseQRankSum=-4.856;DP=452;FS=1.304;HRun=4;HaplotypeScore=56.8207;InbreedingCoeff=-0.0415;MQ=72.11;MQ0=0;MQRankSum=-3.023;QD=28.87;ReadPosRankSum=3.797;VQSLOD=4.5120;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,26:27:66.20:792,66,0	1/1:1,6:7:18.06:216,18,0	0/1:9,4:12:99:102,0,152	0/1:15,5:18:74.97:187,0,75	1/1:3,12:15:24.07:286,24,0	1/1:0,18:18:54.17:648,54,0	1/1:2,21:23:57.17:684,57,0	1/1:1,17:18:48.12:553,48,0	1/1:2,16:18:45.14:539,45,0	1/1:1,10:11:30.09:359,30,0	1/1:0,7:7:21.06:251,21,0	1/1:0,16:16:45.14:540,45,0	1/1:1,19:20:51.16:612,51,0	1/1:1,11:12:30.09:359,30,0	1/1:0,22:22:63.19:755,63,0	1/1:2,17:19:48.15:576,48,0	1/1:1,23:24:54.16:644,54,0	1/1:1,5:6:15.05:180,15,0	1/1:1,17:18:51.14:600,51,0	1/1:2,10:12:30.09:358,30,0	1/1:2,27:29:70.45:861,70,0	1/1:1,11:12:30.09:359,30,0	1/1:2,16:18:42.13:504,42,0	1/1:2,21:23:57.17:683,57,0	1/1:1,5:6:12.04:144,12,0	1/1:1,15:16:45.14:537,45,0	1/1:0,17:17:51.16:612,51,0	1/1:0,3:3:9.03:108,9,0
chr10	48556502	.	G	GAGCCA	12110.19	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-10.835;DP=633;FS=6.079;HRun=0;HaplotypeScore=111.6145;InbreedingCoeff=0.9989;MQ=83.98;MQ0=0;MQRankSum=-5.306;QD=62.10;ReadPosRankSum=-2.033;VQSLOD=5.2948;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:50.66:0,51,993	0/0:10,0:10:30.09:0,30,579	0/0:17,0:17:48.14:0,48,929	0/0:22,0:22:45.10:0,45,773	1/1:4,18:33:65.97:1550,66,0	0/0:29,0:28:78.27:0,78,1601	0/0:10,0:10:30.10:0,30,616	0/0:35,0:35:99:0,99,2016	0/0:11,0:11:27.09:0,27,554	1/1:4,19:25:69.22:1984,69,0	1/1:8,17:29:63:1527,63,0	0/0:12,0:12:33.11:0,33,677	0/0:30,0:30:84.26:0,84,1649	1/1:4,14:18:42.14:1277,42,0	0/0:26,0:26:75.26:0,75,1517	0/0:33,0:33:87.30:0,87,1785	1/1:4,8:13:24.08:730,24,0	1/1:3,13:16:30.10:916,30,0	0/0:19,0:19:57.19:0,57,1110	0/0:36,0:36:99:0,108,2198	0/0:21,0:21:63.20:0,63,1255	0/0:20,0:20:54.19:0,54,1108	0/0:29,0:29:87.30:0,87,1776	0/0:15,0:15:42.14:0,42,862	1/1:5,16:24:51.18:1554,51,0	1/1:4,16:26:69.21:1840,69,0	0/0:42,0:42:99:0,123,2437	1/1:0,9:9:24.08:732,24,0
chr10	48557527	.	GAGACT	G	4141.72	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=14.033;DP=437;FS=30.766;HRun=0;HaplotypeScore=130.7087;InbreedingCoeff=0.9599;MQ=81.41;MQ0=0;MQRankSum=-11.307;QD=44.53;ReadPosRankSum=-0.075;VQSLOD=1.6888;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,117,3807	0/0:3,0:3:9.03:0,9,299	0/0:15,0:15:38.49:0,38,1158	0/0:17,0:17:45.15:0,45,1357	1/1:0,7:7:18.06:289,18,0	0/0:24,0:24:72.25:0,72,2303	0/0:16,0:16:48.14:0,48,1425	1/1:2,9:11:30.09:478,30,0	0/0:21,0:21:63.22:0,63,2020	1/1:0,11:11:33.11:556,33,0	1/1:2,1:3:9.02:104,9,0	0/0:19,0:19:57.20:0,57,1843	0/0:26,0:26:78.25:0,78,2508	1/1:5,16:21:63.11:903,63,0	0/0:18,0:18:54.19:0,54,1794	0/0:24,0:24:72.25:0,72,2338	1/1:1,7:8:21.05:313,21,0	1/1:0,4:4:12.04:202,12,0	0/0:14,0:14:42.13:0,42,1299	0/0:10,0:10:30.09:0,30,924	0/0:22,0:22:66.23:0,66,2172	0/0:13,0:13:39.13:0,39,1293	0/0:12,0:12:36.12:0,36,1170	0/0:15,0:15:45.15:0,45,1499	1/1:0,8:8:24.08:390,24,0	1/1:2,16:18:54.17:858,54,0	0/0:36,0:36:99:0,108,3514	1/1:2,0:2:5.99:49,6,0
chr10	48557534	.	GT	G	1044.34	PASS	AC=18;AF=0.333;AN=54;BaseQRankSum=13.706;DP=428;FS=31.847;HRun=2;HaplotypeScore=104.8942;InbreedingCoeff=0.9653;MQ=82.53;MQ0=0;MQRankSum=-12.591;QD=12.74;ReadPosRankSum=1.732;VQSLOD=1.0178;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,117,1857	0/0:4,0:4:12.04:0,12,192	0/0:15,0:15:42.13:0,42,631	0/0:18,0:18:51.11:0,51,698	1/1:0,7:7:16.99:84,17,0	0/0:24,0:24:72.24:0,72,1136	0/0:13,0:13:39.13:0,39,624	1/1:2,9:11:26.19:153,26,0	0/0:22,0:22:66.22:0,66,1042	1/1:0,11:11:31.91:182,32,0	1/1:1,1:2:4.88:20,5,0	0/0:20,0:20:57.19:0,57,911	0/0:25,0:25:75.24:0,75,1175	1/1:0,16:16:46.32:255,46,0	0/0:20,0:20:60.19:0,60,921	0/0:23,0:23:69.24:0,69,1102	1/1:0,7:7:17.33:95,17,0	1/1:0,4:4:11.77:73,12,0	0/0:13,0:13:39.13:0,39,617	0/0:9,0:9:27.09:0,27,432	0/0:23,0:23:69.24:0,69,1103	0/0:13,0:13:39.13:0,39,622	0/0:12,0:12:36.12:0,36,575	0/0:17,0:17:51.17:0,51,815	1/1:0,8:8:23.03:123,23,0	1/1:0,16:16:46.52:266,47,0	0/0:35,0:35:99:0,105,1650	./.
chr10	48557536	.	GTTTC	G	2614.15	PASS	AC=18;AF=0.333;AN=54;BaseQRankSum=13.718;DP=429;FS=33.820;HRun=0;HaplotypeScore=125.5685;InbreedingCoeff=0.9700;MQ=80.64;MQ0=0;MQRankSum=-12.299;QD=31.88;ReadPosRankSum=1.803;VQSLOD=1.7954;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,117,3253	0/0:4,0:4:12.04:0,12,335	0/0:14,0:14:42.14:0,42,1052	0/0:17,0:17:48.16:0,48,1247	1/1:0,7:7:18.05:209,18,0	0/0:25,0:25:75.26:0,75,2086	0/0:14,0:14:39.13:0,39,1091	1/1:2,9:11:27.09:338,27,0	0/0:22,0:22:66.23:0,66,1845	1/1:0,11:11:33.10:413,33,0	1/1:0,1:2:6.02:68,6,0	0/0:22,0:22:66.23:0,66,1704	0/0:25,0:25:75.26:0,75,1969	1/1:0,16:16:48.14:565,48,0	0/0:19,0:19:57.19:0,57,1537	0/0:23,0:23:69.24:0,69,1929	1/1:0,7:7:18.05:207,18,0	1/1:0,4:4:12.04:152,12,0	0/0:13,0:13:39.12:0,39,1019	0/0:9,0:9:27.09:0,27,724	0/0:23,0:23:69.24:0,69,1899	0/0:13,0:13:39.13:0,39,1045	0/0:13,0:13:39.13:0,39,1047	0/0:18,0:18:54.18:0,54,1435	1/1:0,8:8:24.07:282,24,0	1/1:0,16:16:48.15:587,48,0	0/0:34,0:34:99:0,102,2847	./.
chr10	48557542	.	A	AG	3586.71	PASS	AC=18;AF=0.333;AN=54;BaseQRankSum=14.917;DP=453;FS=22.483;HRun=1;HaplotypeScore=110.1680;InbreedingCoeff=0.9825;MQ=79.97;MQ0=0;MQRankSum=-13.089;QD=34.49;ReadPosRankSum=-0.583;VQSLOD=1.6910;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,120,1535	0/0:4,0:4:12.04:0,12,156	0/0:13,0:13:32.89:0,33,358	0/0:18,0:18:48.11:0,48,573	1/1:2,7:9:18.06:223,18,0	0/0:26,0:26:75.24:0,75,973	0/0:17,0:17:45.15:0,45,584	1/1:11,9:20:56.40:651,56,0	0/0:23,0:23:69.22:0,69,895	1/1:0,11:11:33.11:442,33,0	1/1:2,1:3:9.03:107,9,0	0/0:21,0:21:60.15:0,60,748	0/0:22,0:22:66.21:0,66,857	1/1:0,16:16:48.15:588,48,0	0/0:19,0:19:54.18:0,54,700	0/0:23,0:23:69.22:0,69,895	1/1:4,7:11:26.87:301,27,0	1/1:2,4:6:17.95:203,18,0	0/0:13,0:13:33.10:0,33,415	0/0:8,0:8:24.08:0,24,312	0/0:24,0:24:72.23:0,72,935	0/0:13,0:13:39.13:0,39,506	0/0:13,0:13:39.13:0,39,506	0/0:18,0:18:51.17:0,51,662	1/1:3,8:11:33.11:428,33,0	1/1:1,16:17:51:644,51,0	0/0:34,0:34:99:0,102,1309	./.
chr10	48559157	.	C	CA	6821.97	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=5.596;DP=612;FS=3.322;HRun=7;HaplotypeScore=79.9434;InbreedingCoeff=0.9995;MQ=79.61;MQ0=0;MQRankSum=-1.311;QD=29.28;ReadPosRankSum=1.334;VQSLOD=5.4095;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:84.12:0,84,810	0/0:14,0:14:33.04:0,33,318	0/0:19,0:19:36.36:0,36,306	0/0:20,0:20:25.16:0,25,215	1/1:3,26:29:75.18:873,75,0	0/0:23,0:23:60.08:0,60,573	0/0:24,0:24:66.10:0,66,637	1/1:5,33:38:99:1171,99,0	0/0:15,0:15:39.04:0,39,366	1/1:5,20:25:60.18:725,60,0	1/1:3,22:25:37.22:723,37,0	0/0:18,0:18:54.07:0,54,515	0/0:20,0:20:54.08:0,54,521	1/1:3,16:19:36.11:435,36,0	0/0:27,0:27:75.11:0,75,724	0/0:18,0:18:51.08:0,51,492	1/1:1,19:20:51.16:616,51,0	1/1:2,10:12:27.08:326,27,0	0/0:20,0:20:51.08:0,51,493	0/0:21,0:21:54.08:0,54,521	0/0:23,0:23:57.09:0,57,550	0/0:22,0:22:54.08:0,54,521	0/0:19,0:19:48.07:0,48,462	0/0:14,0:14:36.05:0,36,348	1/1:2,21:23:54.16:648,54,0	1/1:5,24:29:72.22:870,72,0	0/0:30,0:30:81.12:0,81,781	1/1:1,12:13:36.11:435,36,0
chr10	48560057	.	AG	A	2331.87	PASS	AB=0.960;AC=22;AF=0.393;AN=56;BaseQRankSum=6.240;DP=489;FS=7.850;HRun=1;HaplotypeScore=79.3084;InbreedingCoeff=0.8121;MQ=75.90;MQ0=6;MQRankSum=-7.871;QD=10.85;ReadPosRankSum=-3.482;VQSLOD=0.0107;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:56.80:0,57,559	0/0:3,0:3:8.70:0,9,79	0/1:33,0:19:2.58:3,0,222	0/0:33,0:21:3.18:0,3,202	1/1:14,1:15:37.62:257,38,0	0/0:13,0:13:34.50:0,35,345	0/0:17,0:17:45.44:0,45,444	1/1:24,2:26:31.96:238,32,0	0/0:18,0:18:13.20:0,13,389	1/1:6,0:6:12.66:92,13,0	1/1:12,2:14:35.92:297,36,0	0/1:21,2:23:19.40:19,0,365	0/0:15,0:15:38.82:0,39,309	1/1:13,2:15:27.88:224,28,0	0/0:12,1:13:37.85:0,38,346	0/0:21,0:21:47.40:0,47,511	1/1:9,1:10:25.58:201,26,0	1/1:12,1:13:30:224,30,0	0/0:23,0:23:20.46:0,20,551	0/0:26,0:26:60.81:0,61,580	0/0:12,0:12:4.93:0,5,199	0/0:8,0:8:20.88:0,21,186	0/0:14,0:14:41.46:0,41,380	0/0:11,0:11:11.43:0,11,179	1/1:14,0:14:17.96:149,18,0	1/1:21,1:22:52.33:390,52,0	0/0:25,0:25:44.90:0,45,568	1/1:21,2:23:54.33:450,54,0
chr10	48560072	.	ACAAAAAAAAC	A	4391.55	PASS	AB=0.714;AC=19;AF=0.339;AN=56;BaseQRankSum=8.627;DP=468;FS=7.938;HRun=0;HaplotypeScore=142.7554;InbreedingCoeff=0.8856;MQ=64.83;MQ0=7;MQRankSum=-2.694;QD=29.28;ReadPosRankSum=-1.781;VQSLOD=3.6919;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:63.17:0,63,2502	0/0:5,0:5:15.05:0,15,560	0/0:40,0:20:36.72:0,37,1139	0/0:32,0:14:20.71:0,21,326	1/1:13,3:16:15.71:397,16,0	0/0:11,0:11:33.11:0,33,1326	0/0:19,0:19:51.17:0,51,2093	1/1:8,20:28:38.85:578,39,0	0/0:15,0:15:45.15:0,45,1887	1/1:10,2:12:6.60:353,7,0	1/1:1,12:14:32.94:665,33,0	0/0:23,0:23:69.24:0,69,2887	0/0:9,0:9:24.08:0,24,1014	1/1:3,5:10:15.94:423,16,0	0/0:11,0:11:33.11:0,33,1423	0/0:15,0:15:45.15:0,45,1900	0/1:6,3:10:6.04:352,0,6	1/1:8,2:11:11.76:362,12,0	0/0:20,0:20:60.21:0,60,2330	0/0:25,0:25:72.25:0,72,2985	0/0:16,0:16:42.62:0,43,1662	0/0:7,0:7:21.06:0,21,795	0/0:11,0:11:33.11:0,33,1417	0/0:10,0:10:27.09:0,27,1012	1/1:2,14:16:5.67:193,6,0	1/1:20,3:23:40.38:693,40,0	0/0:26,0:26:77.57:0,78,3220	1/1:2,8:10:11.73:375,12,0
chr10	48560075	.	AAAAAAAC	A	2389.61	PASS	AB=0.900;AC=19;AF=0.339;AN=56;BaseQRankSum=10.496;DP=445;FS=9.745;HRun=0;HaplotypeScore=116.8186;InbreedingCoeff=0.8867;MQ=70.02;MQ0=7;MQRankSum=-4.862;QD=20.08;ReadPosRankSum=0.719;VQSLOD=2.6914;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:68.04:0,68,2259	0/0:5,0:5:15.05:0,15,519	0/0:41,0:22:49.85:0,50,1102	0/0:34,0:16:27.18:0,27,403	1/1:11,0:11:15.95:246,16,0	0/0:11,0:11:33.08:0,33,1145	0/0:18,0:18:51.18:0,51,1890	1/1:23,0:23:32.61:302,33,0	0/0:15,0:15:45.15:0,45,1585	1/1:9,0:9:17.36:231,17,0	1/1:12,1:13:25.14:380,25,0	0/0:25,0:25:75.26:0,75,2594	0/0:8,0:8:24.08:0,24,867	1/1:5,2:7:15.05:275,15,0	0/0:11,0:11:33.11:0,33,1224	0/0:15,0:15:45.15:0,45,1596	0/1:8,1:9:6.85:204,0,7	1/1:8,1:9:6.26:197,6,0	0/0:22,0:22:66.22:0,66,2143	0/0:25,0:25:75.24:0,75,2616	0/0:17,0:17:45.63:0,46,1522	0/0:7,0:7:18.06:0,18,680	0/0:10,0:10:30.10:0,30,1143	0/0:11,0:11:27.07:0,27,894	1/1:14,0:14:6.02:111,6,0	1/1:16,0:16:39.79:430,40,0	0/0:26,0:26:74.47:0,74,2762	1/1:8,0:8:12.04:221,12,0
chr10	48560246	.	CT	C	1495.24	PASS	AB=0.994;AC=21;AF=0.375;AN=56;BaseQRankSum=8.346;DP=472;FS=10.312;HRun=11;HaplotypeScore=72.8024;InbreedingCoeff=0.7514;MQ=67.30;MQ0=14;MQRankSum=-5.536;QD=6.59;ReadPosRankSum=-1.439;VQSLOD=0.9386;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:17:44.94:0,45,457	0/1:4,0:4:3.84:4,0,84	0/1:50,1:8:10.58:11,0,21	0/0:32,0:10:11.63:0,12,85	1/1:20,0:20:40.66:221,41,0	0/0:22,1:23:32.49:0,32,543	0/0:13,0:13:36.08:0,36,376	1/1:24,4:27:33.25:254,33,0	0/0:9,0:9:23.26:0,23,224	1/1:26,0:26:19.45:288,19,0	1/1:12,1:13:25.48:147,25,0	0/0:15,0:15:23.18:0,23,316	0/0:10,0:10:22.84:0,23,218	1/1:8,0:8:16.25:101,16,0	0/0:19,0:19:47.87:0,48,468	0/0:12,0:12:33.07:0,33,344	1/1:16,1:17:31.57:189,32,0	1/1:8,0:8:18.51:103,19,0	0/0:15,0:15:5.26:0,5,230	0/0:17,0:17:36.08:0,36,374	0/0:11,0:11:2.41:0,2,202	0/0:5,0:5:12.03:0,12,128	0/0:15,0:15:38.44:0,38,359	0/0:9,0:8:15.04:0,15,160	1/1:20,0:19:25.34:191,25,0	0/1:18,0:18:3.84:158,0,4	0/0:23,0:23:40.15:0,40,508	1/1:14,0:13:7.72:34,8,0
chr10	48560255	.	T	TTC	3776.78	PASS	AB=0.561;AC=19;AF=0.339;AN=56;BaseQRankSum=6.943;DP=500;FS=25.888;HRun=0;HaplotypeScore=76.5848;InbreedingCoeff=0.8326;MQ=59.42;MQ0=20;MQRankSum=-5.181;QD=22.22;ReadPosRankSum=-0.369;VQSLOD=1.9410;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:44.82:0,45,597	0/0:5,0:5:15.04:0,15,181	0/0:68,0:7:3.73:0,4,50	0/0:41,0:7:11.42:0,11,88	1/1:17,4:21:17.85:534,18,0	0/0:22,0:22:66.13:0,66,824	0/0:12,0:12:36.11:0,36,486	1/1:25,1:25:26.40:367,26,0	0/0:10,0:10:30.07:0,30,369	0/1:5,18:23:1.16:636,0,1	1/1:12,2:14:8.66:313,9,0	0/0:15,0:15:42.07:0,42,493	0/0:10,0:10:4.63:0,5,263	1/1:6,2:9:12.05:238,12,0	0/0:19,0:19:55.71:0,56,703	0/0:13,0:13:39.11:0,39,503	1/1:15,3:18:28.69:331,29,0	1/1:9,0:9:1.13:253,1,0	0/0:13,0:13:33.63:0,34,350	0/0:16,0:16:45.08:0,45,547	0/0:11,0:11:8.38:0,8,314	0/0:6,0:6:18.01:0,18,213	0/0:17,0:17:50.56:0,51,570	0/0:11,0:10:24.05:0,24,288	1/1:16,4:19:27.63:564,28,0	1/1:17,1:18:18.46:416,18,0	0/0:25,0:24:66.10:0,66,788	1/1:4,8:11:9.02:126,9,0
chr10	48560256	.	T	TC	2003.79	PASS	AB=0.965;AC=18;AF=0.321;AN=56;BaseQRankSum=9.213;DP=500;FS=39.370;HRun=0;HaplotypeScore=73.8067;InbreedingCoeff=0.6421;MQ=59.25;MQ0=20;MQRankSum=-4.388;QD=8.45;ReadPosRankSum=1.015;VQSLOD=1.7819;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:42.20:0,42,597	0/0:5,0:5:15.02:0,15,175	0/1:69,0:7:29.89:30,0,34	0/0:42,0:7:11.29:0,11,93	1/1:20,1:21:23.01:372,23,0	0/0:22,0:22:66.06:0,66,823	0/0:12,0:12:36.10:0,36,480	1/1:20,4:23:3.57:207,4,0	0/0:10,0:10:30.07:0,30,362	0/1:22,1:23:9.65:344,0,10	1/1:14,0:14:6.56:216,7,0	0/0:15,0:15:44.89:0,45,494	0/0:10,0:10:19.69:0,20,278	0/1:9,0:9:3.10:125,0,3	0/0:19,0:19:55.39:0,55,699	0/0:13,0:13:39.11:0,39,508	1/1:18,0:18:21.98:224,22,0	1/1:7,2:9:8.63:135,9,0	0/0:12,0:12:31.30:0,31,358	0/0:16,0:16:45.08:0,45,549	0/0:11,0:11:8.39:0,8,312	0/0:6,0:6:18:0,18,212	0/0:18,0:18:46.19:0,46,556	0/0:11,0:10:24.03:0,24,282	1/1:18,2:19:8.84:276,9,0	0/1:16,2:18:3.87:187,0,4	0/0:25,0:24:65.98:0,66,764	1/1:12,0:11:8.89:76,9,0
chr10	48560258	.	C	CT	1308.33	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=11.780;DP=498;FS=9.058;HRun=11;HaplotypeScore=76.3291;InbreedingCoeff=0.8847;MQ=56.54;MQ0=22;MQRankSum=-5.979;QD=5.59;ReadPosRankSum=-3.346;VQSLOD=0.6917;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:37.97:0,38,281	0/0:5,0:5:14.91:0,15,117	0/1:70,0:7:3.34:6,0,3	0/0:43,0:5:2.20:0,2,8	1/1:21,1:22:39.49:207,39,0	0/0:22,0:22:51.29:0,51,389	0/0:12,0:12:35.78:0,36,281	1/1:24,1:24:35.30:211,35,0	0/0:10,0:10:25.40:0,25,188	1/1:21,0:22:45.76:239,46,0	1/1:12,1:13:26.26:157,26,0	0/0:15,0:15:33.75:0,34,220	0/0:11,0:11:9.42:0,9,118	1/1:10,0:10:18.90:85,19,0	0/0:19,0:19:24.06:0,24,251	0/0:13,0:13:27.70:0,28,200	1/1:17,0:17:22.32:116,22,0	1/1:8,1:9:5.14:93,5,0	0/0:12,0:12:17.06:0,17,118	0/0:16,0:16:38.31:0,38,276	0/0:10,0:10:20.63:0,21,144	0/0:6,0:6:15.16:0,15,98	0/0:18,0:18:23.97:0,24,241	0/0:11,0:10:21.37:0,21,162	1/1:18,1:18:38.56:190,39,0	1/1:17,1:18:31.24:176,31,0	0/0:25,0:23:42.82:0,43,308	1/1:9,0:8:8.48:41,8,0
chr10	48560281	.	A	ATGTGTGTG	573.35	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=1.191;DP=355;FS=3.634;HRun=0;HaplotypeScore=110.2635;InbreedingCoeff=0.3396;MQ=48.25;MQ0=19;MQRankSum=-3.303;QD=4.62;ReadPosRankSum=-4.337;VQSLOD=0.8164;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:11:12.03:0,12,202	0/0:7,0:7:15.04:0,15,334	0/0:40,0:4:7.65:0,8,61	0/1:35,0:4:0:0,0,0	0/0:17,0:17:8.94:0,9,122	0/0:10,0:10:30.09:0,30,570	0/0:12,0:12:30.07:0,30,529	0/1:22,0:20:40.36:47,0,40	0/0:11,0:11:33.10:0,33,702	0/1:4,0:3:10.96:11,0,74	0/0:8,0:8:9.03:0,9,137	0/0:15,0:15:29.45:0,29,569	0/0:7,0:8:17.53:0,18,476	0/1:6,0:9:8.49:8,0,92	0/0:11,0:11:14.94:0,15,394	0/0:7,0:7:18.05:0,18,451	0/0:7,0:7:7.84:0,8,103	0/0:5,0:5:14.41:0,14,209	1/1:10,0:10:2.87:60,3,0	1/1:10,1:11:9:170,9,0	0/1:14,0:10:29:77,0,29	0/0:5,0:5:15.01:0,15,357	0/0:12,0:12:21.07:0,21,442	0/0:14,0:14:33.05:0,33,856	0/0:11,0:11:9:0,9,128	0/0:11,0:10:12.50:0,12,182	1/1:11,3:15:6.69:339,7,0	0/0:4,0:4:3.01:0,3,50
chr10	48560282	.	TGA	T	1647.90	PASS	AB=0.931;AC=27;AF=0.482;AN=56;BaseQRankSum=4.438;DP=344;FS=1.214;HRun=0;HaplotypeScore=61.7251;InbreedingCoeff=0.4555;MQ=48.22;MQ0=18;MQRankSum=-4.519;QD=7.92;ReadPosRankSum=-1.565;VQSLOD=3.0031;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:10:10.81:0,11,80	0/0:7,0:7:15.03:0,15,203	0/1:37,0:4:0.39:0,0,26	0/0:36,0:3:0:0,0,0	1/1:10,7:17:8.56:136,9,0	0/0:10,0:10:29.96:0,30,324	0/0:12,0:12:29.94:0,30,339	1/1:21,0:19:10.10:271,10,0	0/0:11,0:11:15.56:0,16,299	1/1:1,3:3:8.99:110,9,0	0/1:4,5:7:9.98:61,0,10	0/1:15,0:15:13.21:13,0,370	0/1:8,0:9:26.91:27,0,229	1/1:8,1:9:11.87:105,12,0	0/0:11,0:10:17.72:0,18,267	0/0:7,0:7:8.74:0,9,202	1/1:0,7:7:9.03:123,9,0	1/1:3,2:5:14.81:153,15,0	1/1:10,0:10:6.62:166,7,0	0/1:10,0:10:9.59:61,0,10	0/1:14,0:10:4.41:99,0,4	0/0:5,0:5:14.04:0,14,198	0/0:11,0:11:20.99:0,21,263	0/0:14,0:14:26.72:0,27,477	1/1:5,6:11:8.82:103,9,0	1/1:6,5:10:23.98:279,24,0	0/1:13,0:12:42.58:49,0,43	1/1:3,1:4:8.93:84,9,0
chr10	48560284	.	AGTGT	A	120.42	PASS	AB=0.966;AC=11;AF=0.204;AN=54;BaseQRankSum=3.213;DP=346;FS=11.918;HRun=0;HaplotypeScore=76.0089;InbreedingCoeff=-0.0137;MQ=48.18;MQ0=17;MQRankSum=-4.365;QD=1.32;ReadPosRankSum=1.514;VQSLOD=0.7173;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,6:9:3.01:47,3,0	0/0:6,0:6:12.01:0,12,226	./.	0/0:34,0:3:0.47:0,0,1	0/1:17,0:17:0.55:1,0,25	0/0:10,0:10:9.03:0,9,209	0/0:12,0:12:14.93:0,15,293	0/0:21,0:19:6.02:0,6,108	0/0:10,0:11:17.53:0,18,309	0/1:4,0:3:0.08:8,0,0	0/1:9,0:7:17.94:34,0,18	0/0:16,0:17:24.05:0,24,480	0/0:8,0:9:15.77:0,16,290	0/1:10,0:10:17.88:33,0,18	0/0:10,0:9:12.51:0,13,286	0/0:7,0:7:14.79:0,15,297	0/1:9,0:9:10.87:11,0,19	0/1:5,0:6:50.64:55,0,51	0/0:12,0:12:8.99:0,9,120	0/0:10,0:10:6.02:0,6,119	0/0:17,0:13:3.01:0,3,43	0/1:4,1:5:35.19:35,0,202	0/0:11,0:11:12.04:0,12,280	0/0:14,0:14:29.97:0,30,641	0/1:9,0:9:15.34:15,0,17	0/1:11,0:10:13.21:13,0,84	0/0:14,0:13:18.52:0,19,340	0/0:5,0:5:2.96:0,3,19
chr10	48561482	.	CTAA	C	8617.49	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=17.102;DP=528;FS=11.585;HRun=0;HaplotypeScore=94.8256;InbreedingCoeff=0.9974;MQ=83.41;MQ0=0;MQRankSum=-4.876;QD=40.27;ReadPosRankSum=2.171;VQSLOD=5.9390;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:42.14:0,42,897	0/0:5,0:5:15.05:0,15,334	0/0:12,0:12:33.07:0,33,601	0/0:22,0:22:37.15:0,37,720	1/1:1,28:29:69.24:1126,69,0	0/0:24,0:24:69.22:0,69,1496	0/0:16,0:16:45.15:0,45,1005	1/1:7,22:29:66.21:1036,66,0	0/0:17,0:17:51.18:0,51,1138	1/1:0,20:18:54.17:859,54,0	1/1:5,20:25:54.18:881,54,0	0/0:13,0:13:39.12:0,39,828	0/0:23,0:23:63.19:0,63,1322	1/1:0,17:15:45.15:734,45,0	0/0:15,0:15:42.14:0,42,938	0/0:19,0:19:57.20:0,57,1274	1/1:1,15:16:36.12:587,36,0	1/1:0,14:14:39.05:605,39,0	0/0:22,0:22:57.19:0,57,1219	0/0:19,0:19:51.18:0,51,1139	0/0:17,0:17:48.14:0,48,1006	0/0:15,0:15:39.13:0,39,871	0/0:11,0:11:27.09:0,27,588	0/0:20,0:20:57.15:0,57,1214	1/1:1,18:19:48.16:783,48,0	1/1:1,24:25:72.21:1125,72,0	0/0:29,0:29:81.18:0,81,1697	1/1:2,18:20:54.18:882,54,0
chr10	48561604	.	A	AT	7594.85	PASS	AB=0.947;AC=21;AF=0.375;AN=56;BaseQRankSum=12.854;DP=642;FS=3.207;HRun=7;HaplotypeScore=76.7619;InbreedingCoeff=0.9391;MQ=72.26;MQ0=0;MQRankSum=-4.444;QD=27.92;ReadPosRankSum=0.323;VQSLOD=5.5020;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:78.10:0,78,745	0/0:5,0:5:15.02:0,15,145	0/1:17,1:17:5.09:5,0,229	0/0:14,0:14:30.02:0,30,277	1/1:0,28:28:78.13:907,78,0	0/0:26,0:26:75.12:0,75,724	0/0:22,0:22:60.09:0,60,579	1/1:6,24:30:72.22:870,72,0	0/0:22,0:22:54.08:0,54,521	1/1:1,30:31:90.28:1086,90,0	1/1:2,18:20:48.08:559,48,0	0/0:21,0:21:60.08:0,60,573	0/0:20,0:20:54.08:0,54,521	1/1:2,22:24:51.16:616,51,0	0/0:16,0:16:45.07:0,45,435	0/0:32,0:32:93.12:0,93,887	1/1:4,23:27:60.18:725,60,0	1/1:0,13:13:33.10:399,33,0	0/0:23,0:23:51.06:0,51,488	0/0:33,0:33:96.15:0,96,927	0/0:17,0:17:48.08:0,48,464	0/0:29,0:29:84.11:0,84,800	0/0:16,0:16:45.07:0,45,435	0/0:19,0:19:48.07:0,48,463	1/1:4,26:30:69.21:834,69,0	1/1:1,16:17:48.15:580,48,0	0/0:27,0:27:78.10:0,78,746	1/1:2,32:34:84.26:1015,84,0
chr10	48563250	.	CT	C	4221.29	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=6.865;DP=532;FS=0.000;HRun=14;HaplotypeScore=58.4010;InbreedingCoeff=0.8893;MQ=65.13;MQ0=1;MQRankSum=-0.511;QD=12.75;ReadPosRankSum=2.034;VQSLOD=5.0133;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,22:28:53.46:352,53,0	0/0:6,0:6:9:0,9,80	0/0:23,0:15:23.36:0,23,173	0/0:5,0:5:2.96:0,3,19	1/1:6,23:29:52.89:427,53,0	0/0:23,1:24:33.41:0,33,438	0/0:11,0:11:27.02:0,27,246	1/1:11,28:39:76.08:510,76,0	0/0:12,0:13:32.07:0,32,266	1/1:9,19:28:0.64:289,1,0	1/1:3,13:17:37.69:249,38,0	0/0:12,0:12:24.02:0,24,217	0/0:22,0:22:36.57:0,37,443	1/1:2,16:18:44.55:308,45,0	0/0:25,0:26:39.08:0,39,517	0/0:18,0:18:45.04:0,45,413	1/1:5,11:16:1.94:157,2,0	1/1:5,10:15:22.13:149,22,0	1/1:3,13:16:10.80:217,11,0	1/1:8,22:30:56.40:390,56,0	1/1:6,13:19:26.74:185,27,0	0/0:10,0:10:21.39:0,21,184	0/0:14,0:14:33.01:0,33,298	0/0:16,0:16:41.76:0,42,364	1/1:0,13:13:32.74:226,33,0	1/1:11,18:29:9.05:267,9,0	1/1:3,19:23:15.14:290,15,0	1/1:0,10:10:29.76:206,30,0
chr10	48564062	.	C	CTT	7290.40	PASS	AB=0.588;AC=37;AF=0.661;AN=56;BaseQRankSum=8.251;DP=463;FS=4.521;HRun=8;HaplotypeScore=75.6423;InbreedingCoeff=0.8563;MQ=77.28;MQ0=0;MQRankSum=-2.135;QD=22.23;ReadPosRankSum=1.666;VQSLOD=3.8993;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:21.04:0,21,234	0/0:12,0:12:36.07:0,36,383	0/0:22,0:19:32.65:0,33,406	0/0:10,0:8:0.19:0,0,88	1/1:3,18:22:54.14:823,54,0	0/0:24,0:23:66.16:0,66,726	0/0:10,0:10:18.03:0,18,200	1/1:17,1:38:69.06:689,69,0	0/0:17,0:17:39.09:0,39,435	1/1:0,13:13:39.12:598,39,0	1/1:2,21:23:63.18:973,63,0	0/1:3,0:10:12.65:53,0,13	1/1:3,0:17:27.45:94,27,0	1/1:1,4:5:12.04:190,12,0	0/0:15,0:15:45.11:0,45,492	0/0:16,0:16:48.11:0,48,526	1/1:1,17:18:36.12:571,36,0	1/1:0,12:12:27.09:429,27,0	1/1:7,0:25:46.64:204,47,0	1/1:5,1:29:60.38:260,60,0	1/1:1,0:5:9.98:34,10,0	1/1:3,0:11:16.53:55,17,0	1/1:1,0:15:32.44:112,32,0	1/1:2,0:5:7.49:26,7,0	1/1:2,15:18:45.15:692,45,0	1/1:3,18:21:57.18:884,57,0	1/1:1,0:31:64.88:223,65,0	1/1:2,8:10:24.08:381,24,0
chr10	48565084	.	AG	A	6204.39	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=13.292;DP=578;FS=2.859;HRun=4;HaplotypeScore=56.6462;InbreedingCoeff=0.9986;MQ=87.75;MQ0=0;MQRankSum=-0.359;QD=32.83;ReadPosRankSum=3.076;VQSLOD=5.5443;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:51.17:0,51,714	0/0:6,0:6:18.06:0,18,251	0/0:21,0:21:56.91:0,57,713	0/0:20,0:20:57.12:0,57,748	1/1:0,27:27:78.24:935,78,0	0/0:22,0:22:66.21:0,66,907	0/0:12,0:12:36.12:0,36,503	0/0:39,0:39:99:0,105,1413	0/0:16,0:16:42.13:0,42,571	1/1:0,22:22:66.20:792,66,0	1/1:0,15:15:33.10:392,33,0	0/0:18,0:18:51.14:0,51,680	0/0:28,0:28:81.25:0,81,1102	1/1:1,22:23:57.17:684,57,0	0/0:30,0:30:87.29:0,87,1218	0/0:22,0:22:63.21:0,63,875	1/1:1,26:27:75.19:883,75,0	1/1:2,16:18:45.14:540,45,0	0/0:21,0:21:54.17:0,54,739	0/0:22,0:22:60.16:0,60,803	0/0:20,0:20:60.20:0,60,839	0/0:14,0:14:42.14:0,42,588	0/0:16,0:16:45.14:0,45,613	0/0:14,0:14:33.11:0,33,462	1/1:1,21:22:63.19:756,63,0	1/1:0,15:15:42.13:503,42,0	0/0:31,0:30:90.30:0,90,1259	1/1:0,20:20:60.18:720,60,0
chr10	48565242	.	A	ATC	13195.54	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-7.778;DP=583;FS=3.240;HRun=0;HaplotypeScore=68.3570;InbreedingCoeff=0.9951;MQ=77.00;MQ0=0;MQRankSum=-1.663;QD=48.34;ReadPosRankSum=-1.644;VQSLOD=5.4871;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:60.19:0,60,840	0/0:7,0:7:21.04:0,21,280	0/0:12,0:12:13.57:0,14,237	0/0:11,0:11:24.05:0,24,322	1/1:3,28:33:75.26:1374,75,0	0/0:24,0:24:72.24:0,72,1032	0/0:12,0:12:36.10:0,36,481	1/1:4,36:42:99:2045,117,0	0/0:20,0:20:57.18:0,57,800	1/1:1,26:27:78.27:1430,78,0	1/1:0,32:32:93.32:1686,93,0	0/0:21,0:21:60.13:0,60,834	0/0:20,0:20:60.20:0,60,860	1/1:0,26:26:75.26:1375,75,0	0/0:21,0:21:60.17:0,60,823	0/0:26,0:26:75.25:0,75,1075	1/1:1,26:27:60.21:1099,60,0	1/1:0,19:20:57.20:1028,57,0	0/0:20,0:20:54.18:0,54,773	0/0:25,0:25:72.24:0,72,1031	0/0:12,0:12:33.09:0,33,452	0/0:10,0:10:30.10:0,30,429	0/0:15,0:15:39.13:0,39,558	0/0:15,0:15:42.13:0,42,584	1/1:1,30:32:81.28:1485,81,0	1/1:0,23:24:72.22:1288,72,0	0/0:17,0:16:45.15:0,45,645	1/1:3,7:10:21.07:385,21,0
chr10	48566023	.	A	AT	4006.10	PASS	AB=0.955;AC=22;AF=0.393;AN=56;BaseQRankSum=-8.779;DP=454;FS=13.179;HRun=10;HaplotypeScore=46.2756;InbreedingCoeff=0.8268;MQ=73.28;MQ0=0;MQRankSum=0.966;QD=18.63;ReadPosRankSum=-2.553;VQSLOD=2.3604;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:53.93:0,54,443	0/0:9,0:9:26.97:0,27,222	0/1:9,0:9:13.59:14,0,36	0/0:8,0:9:8.88:0,9,65	1/1:7,15:22:39.02:391,39,0	0/0:20,0:20:47.92:0,48,394	0/0:11,0:11:32:0,32,253	1/1:6,22:28:66.08:667,66,0	0/0:9,0:9:23.97:0,24,197	1/1:3,17:20:51.11:535,51,0	1/1:5,13:18:29.95:283,30,0	0/0:16,0:16:38.94:0,39,320	0/0:10,0:10:23.95:0,24,197	1/1:2,11:14:8.27:278,8,0	0/0:25,0:25:71.90:0,72,591	0/0:13,0:13:35.94:0,36,295	1/1:4,20:24:23.61:455,24,0	1/1:4,15:19:45.11:480,45,0	0/0:13,0:13:26.95:0,27,222	0/0:23,0:23:53.91:0,54,443	0/0:12,0:13:21.57:0,22,257	0/0:11,0:11:20.92:0,21,169	0/1:9,1:10:11.03:11,0,127	0/0:17,0:18:15.29:0,15,233	1/1:6,21:28:26.32:470,26,0	1/1:7,10:18:32.92:334,33,0	0/0:20,0:19:53.91:0,54,440	1/1:3,2:5:9.01:89,9,0
chr10	48567771	.	TTGTGTGTGTGTG	T	2541.36	PASS	AB=0.729;AC=16;AF=0.296;AN=54;BaseQRankSum=6.739;DP=598;FS=0.000;HRun=0;HaplotypeScore=195.3367;InbreedingCoeff=0.6723;MQ=62.72;MQ0=16;MQRankSum=-6.032;QD=14.28;ReadPosRankSum=-1.152;VQSLOD=2.2969;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:27.02:0,27,840	0/0:6,0:6:3.01:0,3,139	./.	0/0:31,0:15:0.89:0,1,2	1/1:10,8:18:9.03:309,9,0	0/0:18,0:19:30.07:0,30,1179	0/0:23,0:23:36.95:0,37,839	0/0:27,0:25:20.40:0,20,298	0/0:12,0:13:18.04:0,18,714	1/1:19,2:24:9.45:475,9,0	0/1:7,4:11:22.33:95,0,22	0/0:18,0:25:9.02:0,9,253	0/0:27,0:27:25.44:0,25,981	0/1:18,11:29:3.49:397,0,3	0/0:19,0:21:24.08:0,24,841	0/0:12,0:15:18:0,18,487	1/1:16,9:26:14.57:484,15,0	1/1:20,0:20:11.95:135,12,0	0/0:16,0:15:11.07:0,11,297	0/0:11,0:15:24.06:0,24,635	0/0:53,0:53:48.05:0,48,1234	0/0:19,0:19:12.01:0,12,343	0/0:13,0:13:9.01:0,9,188	0/0:26,0:25:12.47:0,12,363	1/1:19,7:25:5.27:402,5,0	1/1:16,1:16:6.01:131,6,0	0/0:10,0:13:6.02:0,6,170	1/1:2,4:7:9.03:290,9,0
chr10	48567945	.	CA	C	5401.05	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=8.413;DP=569;FS=13.135;HRun=9;HaplotypeScore=59.1130;InbreedingCoeff=0.9955;MQ=71.63;MQ0=1;MQRankSum=-0.788;QD=21.60;ReadPosRankSum=1.801;VQSLOD=4.7525;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:48.14:0,48,551	0/0:6,0:6:15.04:0,15,173	0/0:22,0:14:28.63:0,29,253	0/0:28,0:19:21.42:0,21,278	1/1:6,31:37:55.42:759,55,0	0/0:19,0:20:57:0,57,637	0/0:17,0:17:48.14:0,48,554	1/1:4,21:25:63.02:576,63,0	0/0:17,0:17:42.12:0,42,485	1/1:5,27:32:81.04:741,81,0	1/1:1,28:29:75.03:685,75,0	0/0:26,0:26:72.20:0,72,818	0/0:14,0:14:36.11:0,36,415	1/1:3,14:17:36.01:329,36,0	0/0:22,0:22:63.18:0,63,718	0/0:19,0:19:51.15:0,51,588	1/1:3,31:34:81.04:741,81,0	1/1:3,21:24:51.02:466,51,0	0/0:11,0:11:29.88:0,30,324	0/0:20,0:20:57.17:0,57,656	0/0:17,0:17:46.38:0,46,520	0/0:21,0:21:57.16:0,57,649	0/0:12,0:12:36.10:0,36,412	0/0:13,0:12:30.09:0,30,343	1/1:3,28:31:69.03:631,69,0	1/1:2,11:14:35.05:308,35,0	0/0:13,0:13:36.11:0,36,415	1/1:0,7:7:18.01:164,18,0
chr10	48568466	.	AAGAC	A	9871.04	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=15.385;DP=551;FS=5.886;HRun=0;HaplotypeScore=92.0752;InbreedingCoeff=0.9985;MQ=75.00;MQ0=0;MQRankSum=-5.347;QD=43.68;ReadPosRankSum=2.528;VQSLOD=5.0289;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:27.09:0,27,675	0/0:8,0:8:21.07:0,21,546	0/0:22,0:22:54.18:0,54,1318	0/0:15,0:15:39.13:0,39,901	1/1:2,22:24:63.21:1069,63,0	0/0:29,0:29:78.27:0,78,1991	0/0:11,0:11:33.11:0,33,858	1/1:5,27:32:66.19:1117,66,0	0/0:17,0:17:48.16:0,48,1221	1/1:7,17:24:51.17:916,51,0	1/1:1,32:33:93.27:1599,93,0	0/0:13,0:13:33.11:0,33,858	0/0:19,0:19:45.15:0,45,1087	1/1:1,16:17:45.15:793,45,0	0/0:22,0:22:63.22:0,63,1611	0/0:28,0:28:75.26:0,75,1923	1/1:0,15:15:45.15:809,45,0	1/1:4,15:19:36.12:647,36,0	0/0:21,0:21:60.21:0,60,1478	0/0:28,0:28:78.27:0,78,1920	0/0:10,0:10:24.08:0,24,590	0/0:12,0:12:24.08:0,24,598	0/0:17,0:17:45.14:0,45,1085	0/0:13,0:13:33.07:0,33,800	1/1:1,23:24:66.22:1142,66,0	1/1:1,21:22:63.22:1132,63,0	0/0:25,0:25:60.21:0,60,1557	1/1:1,15:16:36.12:647,36,0
chr10	48568840	.	TA	T	1423.77	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.014;DP=649;FS=6.266;HRun=1;HaplotypeScore=76.3306;InbreedingCoeff=0.9295;MQ=78.59;MQ0=1;MQRankSum=-0.841;QD=38.48;ReadPosRankSum=-4.755;VQSLOD=1.8660;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,120,1914	0/0:5,0:5:15.05:0,15,240	0/0:20,0:18:52.99:0,53,789	0/0:14,0:14:42.14:0,42,638	0/0:30,0:30:90.31:0,90,1435	0/0:28,0:28:84.29:0,84,1341	0/0:16,0:16:48.16:0,48,767	1/1:0,37:37:99:1519,111,0	0/0:18,0:18:54.18:0,54,859	0/0:34,0:34:99:0,102,1609	0/0:17,0:17:51.17:0,51,814	0/0:30,0:30:90.29:0,90,1414	0/0:33,0:33:99:0,99,1559	0/0:24,0:24:72.23:0,72,1125	0/0:27,0:27:81.23:0,81,1221	0/0:27,0:27:78.24:0,78,1199	0/0:25,0:25:75.23:0,75,1169	0/0:17,0:17:51.17:0,51,810	0/0:21,0:21:63.21:0,63,987	0/0:25,0:25:75.24:0,75,1173	0/0:8,0:8:24.08:0,24,383	0/0:20,0:20:60.19:0,60,933	0/0:16,0:16:45.15:0,45,719	0/0:23,0:23:69.20:0,69,1074	0/0:23,0:23:69.24:0,69,1100	0/0:26,0:26:78.26:0,78,1225	0/0:40,0:40:99:0,120,1918	0/0:4,0:4:9.03:0,9,143
chr10	48569505	.	AT	A	964.71	PASS	AB=0.917;AC=10;AF=0.185;AN=54;BaseQRankSum=0.519;DP=414;FS=1.904;HRun=11;HaplotypeScore=64.4740;InbreedingCoeff=0.6871;MQ=62.31;MQ0=0;MQRankSum=0.839;QD=11.91;ReadPosRankSum=-0.961;VQSLOD=3.1720;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,105,1074	0/0:6,0:6:18.05:0,18,192	0/1:10,0:9:6.68:7,0,79	0/1:12,3:15:41.30:41,0,98	0/0:1,0:7:17.07:0,17,89	0/0:17,0:17:39.10:0,39,416	0/0:12,0:12:27.07:0,27,288	0/0:15,0:33:58.27:0,58,328	0/0:10,1:11:2.21:0,2,212	0/0:5,0:12:18.44:0,18,106	0/0:5,0:13:16.22:0,16,80	0/0:12,0:12:20.44:0,20,301	0/0:10,0:10:27.07:0,27,287	0/0:4,0:17:17.93:0,18,88	0/0:13,0:15:26.02:0,26,284	0/0:13,0:13:30.04:0,30,308	0/0:9,0:32:41.89:0,42,212	0/0:4,0:20:28.49:0,28,144	1/1:2,17:19:44.61:356,45,0	1/1:1,2:3:5.99:49,6,0	1/1:2,17:19:47.94:394,48,0	./.	0/0:8,0:8:12.03:0,12,128	0/0:19,0:19:42.99:0,43,449	0/0:2,0:12:19.69:0,20,100	0/0:4,0:16:22.80:0,23,120	1/1:3,11:15:34.87:277,35,0	0/0:3,0:10:23.16:0,23,140
chr10	48569777	.	ACC	A	1031.74	PASS	AB=0.963;AC=15;AF=0.268;AN=56;BaseQRankSum=9.973;DP=385;FS=1.135;HRun=2;HaplotypeScore=78.3477;InbreedingCoeff=0.1662;MQ=48.99;MQ0=26;MQRankSum=-7.481;QD=6.29;ReadPosRankSum=0.806;VQSLOD=0.0876;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:36:94.90:0,95,1343	0/0:5,0:4:12.04:0,12,167	0/0:9,1:3:5.73:0,6,42	0/1:9,1:6:2.45:2,0,25	1/1:7,0:6:8.91:63,9,0	0/0:21,0:21:63.13:0,63,863	0/0:20,0:19:50.37:0,50,668	0/1:28,2:29:99:216,0,176	0/0:13,0:11:29.77:0,30,342	0/1:19,1:19:99:153,0,161	1/1:5,0:4:2.90:16,3,0	0/0:11,0:10:24.01:0,24,323	0/0:14,0:14:31.68:0,32,343	0/1:11,1:10:14.44:110,0,14	0/0:19,0:17:46.65:0,47,583	0/0:6,0:5:15.05:0,15,209	0/1:18,0:17:41.28:145,0,41	0/1:16,0:15:67.48:90,0,67	0/0:13,0:10:30.03:0,30,380	0/0:7,0:6:15.04:0,15,210	0/0:5,0:4:9.02:0,9,106	0/0:8,0:8:24.07:0,24,305	0/0:10,0:7:18.02:0,18,234	0/0:22,0:21:50.61:0,51,517	0/1:10,0:11:0.66:1,0,67	0/1:17,1:17:5.64:273,0,6	0/1:9,0:8:28.50:29,0,222	1/1:6,1:6:11.81:91,12,0
chr10	48569787	.	A	AC	1089.38	PASS	AB=0.809;AC=14;AF=0.250;AN=56;BaseQRankSum=9.845;DP=444;FS=7.162;HRun=0;HaplotypeScore=84.1977;InbreedingCoeff=0.3816;MQ=57.20;MQ0=17;MQRankSum=-3.901;QD=5.92;ReadPosRankSum=2.008;VQSLOD=2.7798;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:39:99:0,108,1232	0/0:5,0:4:11.95:0,12,108	0/0:16,0:7:20.03:0,20,125	0/0:13,0:7:10.32:0,10,44	0/1:2,0:16:8.10:40,0,8	0/0:22,0:22:60.82:0,61,673	0/0:20,0:19:44.86:0,45,510	0/1:19,19:37:68.51:424,0,69	0/0:16,0:14:40:0,40,365	0/1:18,5:23:56.28:102,0,56	1/1:2,1:11:8.73:54,9,0	0/0:11,0:11:25.30:0,25,178	0/0:15,0:15:24.28:0,24,142	1/1:13,0:12:10.72:118,11,0	0/0:19,0:17:50.97:0,51,574	0/0:5,0:5:14.93:0,15,131	0/1:20,0:19:16.04:125,0,16	1/1:20,0:19:6.73:131,7,0	0/0:15,0:13:34.91:0,35,254	0/0:7,0:6:14.85:0,15,102	0/0:6,0:6:14.86:0,15,103	0/0:7,0:7:14.13:0,14,100	0/0:9,0:7:16.08:0,16,122	0/0:23,0:22:36.53:0,37,343	0/1:13,1:13:18.67:64,0,19	1/1:19,0:19:16.45:144,16,0	0/0:11,0:10:21.18:0,21,146	0/1:8,0:8:17.70:58,0,18
chr10	48569789	.	A	AC	50.32	PASS	AB=0.838;AC=6;AF=0.107;AN=56;BaseQRankSum=7.576;DP=445;FS=1.548;HRun=0;HaplotypeScore=90.1835;InbreedingCoeff=-0.1224;MQ=57.58;MQ0=16;MQRankSum=-4.596;QD=0.45;ReadPosRankSum=4.311;VQSLOD=1.3288;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:39:98.61:0,99,1171	0/0:5,0:4:11.95:0,12,108	0/0:17,0:8:18.22:0,18,126	0/1:12,0:7:15.83:16,0,29	0/0:15,0:15:4.26:0,4,19	0/0:22,0:22:61.18:0,61,674	0/0:23,0:22:47.52:0,48,536	0/0:37,0:36:64.64:0,65,249	0/0:15,0:13:37.11:0,37,346	0/1:18,7:25:37.16:37,0,73	0/0:9,0:9:9.69:0,10,56	0/0:11,0:11:25.29:0,25,180	0/0:15,0:15:21.83:0,22,122	0/1:11,2:12:4.39:4,0,62	0/0:19,0:17:50.97:0,51,568	0/0:5,0:5:14.93:0,15,131	0/1:15,4:18:16.51:17,0,100	0/1:20,3:22:5.53:6,0,80	0/0:15,0:13:35.65:0,36,269	0/0:7,0:6:14.84:0,15,101	0/0:6,0:6:14.87:0,15,105	0/0:7,0:7:14.13:0,14,100	0/0:9,0:7:16.06:0,16,120	0/0:23,0:22:36.55:0,37,347	0/0:14,0:13:11.34:0,11,61	0/1:13,7:19:36.13:85,0,36	0/0:10,0:9:24.17:0,24,171	0/0:8,0:8:9.52:0,10,60
chr10	48569794	.	A	AAC	3087.89	PASS	AB=1.000;AC=27;AF=0.482;AN=56;BaseQRankSum=9.937;DP=446;FS=22.970;HRun=0;HaplotypeScore=114.9356;InbreedingCoeff=0.6022;MQ=61.17;MQ0=15;MQRankSum=-7.777;QD=12.45;ReadPosRankSum=-2.957;VQSLOD=1.2803;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:36:92.94:0,93,999	0/0:5,0:4:6.01:0,6,63	0/0:18,0:9:1.85:0,2,96	0/1:14,0:8:3.47:21,0,3	1/1:17,0:18:14.99:98,15,0	0/0:23,0:23:54.27:0,54,567	0/0:26,0:25:59.83:0,60,583	1/1:38,0:38:81.11:688,81,0	0/0:13,0:11:29.92:0,30,288	1/1:18,6:24:50.71:429,51,0	1/1:10,0:10:9.02:72,9,0	0/1:11,0:11:1.85:2,0,81	0/0:15,0:15:6.57:0,7,91	1/1:12,2:15:34.01:281,34,0	0/0:17,0:15:42.10:0,42,468	0/0:4,0:4:12.02:0,12,125	1/1:12,4:18:41.21:365,41,0	1/1:15,3:22:50.28:452,50,0	0/1:14,0:13:12.68:13,0,81	1/1:7,0:6:6.22:28,6,0	0/0:8,0:8:9.72:0,10,94	0/1:5,0:5:6.17:6,0,19	0/0:8,0:7:5.91:0,6,53	0/0:24,0:23:35.69:0,36,407	1/1:11,0:12:15.49:149,15,0	1/1:12,6:19:53.38:537,53,0	0/1:10,0:9:35.62:36,0,36	1/1:7,0:7:14.79:112,15,0
chr10	48570584	.	TA	T	1126.21	PASS	AB=0.833;AC=9;AF=0.161;AN=56;BaseQRankSum=-0.984;DP=568;FS=3.442;HRun=14;HaplotypeScore=96.2769;InbreedingCoeff=0.7590;MQ=66.55;MQ0=3;MQRankSum=2.031;QD=9.97;ReadPosRankSum=2.385;VQSLOD=3.3842;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:11,3:15:25.73:26,0,189	0/0:12,0:12:32.96:0,33,296	0/0:24,0:17:3.14:0,3,112	0/0:16,0:9:8.88:0,9,70	0/0:7,0:26:50.21:0,50,255	0/0:20,0:20:54.05:0,54,498	0/0:16,0:16:29.81:0,30,293	0/0:15,0:23:42.77:0,43,210	0/0:18,1:20:36.30:0,36,459	0/0:9,0:26:42.77:0,43,244	0/0:7,0:22:30.76:0,31,193	0/0:26,0:27:43.47:0,43,505	0/0:13,0:13:36.04:0,36,334	0/0:7,0:23:31.35:0,31,160	0/0:16,0:18:22.74:0,23,330	0/0:18,2:20:3.77:0,4,305	0/0:5,0:14:20.89:0,21,101	0/0:5,0:11:14.78:0,15,75	1/1:6,17:23:47.49:324,47,0	1/1:9,23:33:8.66:340,9,0	1/1:3,10:13:26.76:185,27,0	0/0:27,2:31:30.51:0,31,524	0/0:19,0:19:48.03:0,48,438	0/0:15,0:15:18.47:0,18,305	0/0:6,0:19:21.01:0,21,127	0/0:8,0:22:49.32:0,49,288	1/1:8,21:29:59.42:411,59,0	0/0:6,0:17:25.99:0,26,153
chr10	48571474	.	C	CT	5446.71	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=8.856;DP=519;FS=0.743;HRun=9;HaplotypeScore=75.8682;InbreedingCoeff=0.9136;MQ=68.95;MQ0=0;MQRankSum=-12.333;QD=24.42;ReadPosRankSum=-1.713;VQSLOD=4.8699;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:38.97:0,39,336	0/0:11,0:11:23.99:0,24,206	0/0:14,0:13:17.55:0,18,134	0/0:6,0:6:5.13:0,5,22	1/1:5,23:28:40.13:670,40,0	0/0:18,0:18:44.98:0,45,388	0/0:12,0:12:29.98:0,30,256	1/1:14,20:34:46.08:716,46,0	0/0:13,0:13:0.89:0,1,178	1/1:9,20:29:61.40:660,61,0	1/1:9,23:32:58.16:853,58,0	0/0:14,0:14:38.03:0,38,319	0/0:24,0:24:65.99:0,66,573	1/1:2,11:13:39.07:414,39,0	0/0:21,0:21:56.94:0,57,487	0/0:16,0:15:44.95:0,45,381	1/1:9,13:22:1.92:429,2,0	1/1:1,9:10:27.07:298,27,0	0/0:20,0:21:41:0,41,340	0/0:13,0:13:32.97:0,33,284	0/0:7,0:7:21:0,21,182	0/0:26,0:26:65.96:0,66,571	0/0:26,0:26:68.96:0,69,592	0/0:10,0:10:23.99:0,24,208	1/1:5,15:21:56.70:557,57,0	1/1:6,16:22:60.12:638,60,0	0/0:29,0:29:68.74:0,69,583	1/1:7,5:12:21.02:213,21,0
chr10	48571493	.	AT	A	4099.09	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=15.256;DP=471;FS=6.682;HRun=10;HaplotypeScore=72.7803;InbreedingCoeff=0.9562;MQ=66.23;MQ0=0;MQRankSum=-9.605;QD=19.61;ReadPosRankSum=0.590;VQSLOD=4.4820;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:33.06:0,33,348	0/0:8,0:8:12.03:0,12,133	0/0:13,0:12:15.48:0,15,151	0/1:3,0:3:0.01:0,0,0	1/1:5,20:25:59.98:521,60,0	0/0:20,0:20:54.13:0,54,582	0/0:10,0:10:30.08:0,30,332	1/1:8,22:30:68.97:596,69,0	0/0:11,0:11:30.08:0,30,332	1/1:5,25:30:71.77:641,72,0	1/1:2,31:33:83.96:729,84,0	0/0:10,0:10:21.06:0,21,232	0/0:24,0:24:57.15:0,57,631	1/1:2,8:10:23.98:208,24,0	0/0:21,0:21:54.15:0,54,597	0/0:13,0:12:36.10:0,36,398	1/1:4,17:21:41.95:364,42,0	1/1:3,6:9:11.99:104,12,0	0/0:19,0:19:54.10:0,54,571	0/0:15,0:15:42.11:0,42,465	0/0:7,0:9:23.73:0,24,228	0/0:19,1:20:28.36:0,28,529	0/0:23,0:23:66.17:0,66,720	0/0:5,0:5:15.04:0,15,166	1/1:1,20:22:19.79:389,20,0	1/1:2,17:19:47.98:416,48,0	0/0:29,0:29:75.11:0,75,789	1/1:2,5:7:15:130,15,0
chr10	48573257	.	G	GT	591.46	PASS	AB=0.900;AC=17;AF=0.304;AN=56;BaseQRankSum=11.278;DP=499;FS=3.679;HRun=11;HaplotypeScore=94.9852;InbreedingCoeff=0.7305;MQ=57.61;MQ0=2;MQRankSum=-8.827;QD=3.38;ReadPosRankSum=-1.859;VQSLOD=0.5147;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:40.86:0,41,705	0/0:2,0:2:6.02:0,6,72	0/0:12,0:10:19.65:0,20,175	0/0:13,0:9:16.12:0,16,170	1/1:25,2:27:14.99:147,15,0	0/0:24,0:24:66.15:0,66,761	0/0:19,0:19:53.83:0,54,622	1/1:26,4:23:25.52:198,26,0	0/0:23,0:23:66.20:0,66,786	1/1:21,0:19:13.82:111,14,0	1/1:21,0:21:6.33:17,6,0	0/0:21,0:21:34.34:0,34,621	0/0:14,0:14:39.11:0,39,455	1/1:10,0:10:5.56:29,6,0	0/0:19,0:19:54.15:0,54,635	0/0:19,0:19:45.14:0,45,540	0/0:10,0:10:0.56:0,1,2	1/1:8,1:9:1.20:34,1,0	0/0:26,0:26:46.11:0,46,557	0/0:16,0:16:46.86:0,47,348	0/0:18,0:17:41.37:0,41,288	0/0:5,0:5:15.04:0,15,172	0/0:10,0:10:27.08:0,27,323	0/0:17,0:18:49.03:0,49,567	1/1:22,3:23:3.90:69,4,0	0/1:24,3:25:38.86:127,0,39	0/0:29,0:29:53.88:0,54,524	1/1:2,1:3:3.01:37,3,0
chr10	48573263	.	TTG	T	1114.27	PASS	AB=0.969;AC=11;AF=0.196;AN=56;BaseQRankSum=10.366;DP=520;FS=13.144;HRun=0;HaplotypeScore=102.6636;InbreedingCoeff=0.0634;MQ=56.59;MQ0=2;MQRankSum=-6.771;QD=5.93;ReadPosRankSum=-4.376;VQSLOD=0.7045;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:27:26.80:0,27,1046	0/0:3,0:3:9.03:0,9,144	0/0:14,0:12:28.40:0,28,362	0/0:12,0:8:14.49:0,14,236	0/1:24,1:23:58.82:153,0,59	0/0:24,0:24:69.16:0,69,1062	0/0:20,0:20:60.16:0,60,965	0/1:30,1:24:44.96:235,0,45	0/0:26,0:26:75.22:0,75,1231	0/1:22,1:21:48.69:202,0,49	0/1:20,0:20:46.70:78,0,47	0/0:22,0:22:60.18:0,60,989	0/0:15,0:15:45.14:0,45,737	0/1:10,0:10:15.13:15,0,54	0/0:22,0:22:63.19:0,63,1033	0/0:20,0:20:54.18:0,54,918	1/1:10,0:10:18.15:100,18,0	0/1:10,0:10:1.75:33,0,2	0/0:29,0:29:65.28:0,65,1219	0/0:17,0:17:51.12:0,51,803	0/0:17,0:16:36.02:0,36,605	0/0:5,0:5:15.02:0,15,225	0/0:9,0:9:27.09:0,27,483	0/0:18,0:18:51.07:0,51,864	0/1:22,4:24:79.34:274,0,79	0/1:29,1:28:99:156,0,147	0/0:31,0:31:72.16:0,72,1172	0/1:3,0:3:8.68:22,0,9
chr10	48573264	.	TG	T	1651.47	PASS	AB=0.841;AC=18;AF=0.321;AN=56;BaseQRankSum=13.165;DP=522;FS=23.579;HRun=1;HaplotypeScore=92.2086;InbreedingCoeff=0.7455;MQ=56.74;MQ0=2;MQRankSum=-9.038;QD=8.74;ReadPosRankSum=-1.948;VQSLOD=-0.5492;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,1:27:5.84:0,6,821	0/0:3,0:3:9.03:0,9,123	0/0:13,0:11:23.50:0,23,292	0/0:12,0:8:16.60:0,17,202	1/1:18,7:23:34.92:316,35,0	0/0:24,0:24:69.16:0,69,890	0/0:20,0:20:60.16:0,60,792	1/1:32,0:25:18.67:148,19,0	0/0:25,0:25:75.22:0,75,1014	1/1:23,0:21:11.02:285,11,0	1/1:14,5:19:15.05:201,15,0	0/0:22,0:22:60.01:0,60,787	0/0:16,0:16:48.07:0,48,614	1/1:10,0:10:7.95:51,8,0	0/0:23,0:23:62.27:0,62,847	0/0:21,0:21:57.17:0,57,777	1/1:5,5:10:27.79:241,28,0	1/1:10,0:10:5.75:32,6,0	0/0:29,0:29:65.15:0,65,984	0/0:17,0:17:51.05:0,51,639	0/0:17,0:16:36.04:0,36,487	0/0:5,0:5:15.02:0,15,191	0/0:10,0:10:30.09:0,30,409	0/0:18,0:18:51.06:0,51,698	0/1:22,4:24:13.48:211,0,13	0/1:24,7:29:44.20:348,0,44	0/0:30,0:30:72.12:0,72,941	1/1:3,0:3:4.05:13,4,0
chr10	48573271	.	TG	T	1736.54	PASS	AB=0.962;AC=20;AF=0.357;AN=56;BaseQRankSum=12.919;DP=509;FS=29.189;HRun=1;HaplotypeScore=86.1873;InbreedingCoeff=0.8179;MQ=59.90;MQ0=2;MQRankSum=-8.622;QD=9.49;ReadPosRankSum=-0.899;VQSLOD=-0.3680;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:32.20:0,32,717	0/0:3,0:3:9.03:0,9,119	0/0:16,0:14:28.26:0,28,343	0/1:11,1:8:0.59:1,0,133	1/1:23,0:22:39.41:292,39,0	0/0:21,0:21:60.17:0,60,763	0/0:18,0:18:54.11:0,54,650	1/1:29,0:22:27.24:182,27,0	0/0:27,0:27:80.78:0,81,974	1/1:13,12:23:2.54:271,3,0	1/1:14,1:15:23.71:231,24,0	0/0:23,0:23:58:0,58,692	0/0:18,0:18:48.10:0,48,600	0/1:10,0:10:7.54:37,0,8	0/0:25,0:25:69.18:0,69,878	0/0:24,0:24:66.14:0,66,822	1/1:6,1:7:20.72:209,21,0	1/1:2,5:7:8.18:63,8,0	0/0:28,0:28:78.02:0,78,869	0/0:15,0:15:45.11:0,45,561	0/0:15,0:14:32.88:0,33,393	0/0:6,0:6:18.02:0,18,194	0/0:11,0:11:33.10:0,33,422	0/0:19,0:19:48.10:0,48,589	1/1:20,2:20:23.84:211,24,0	1/1:29,1:28:40.91:424,41,0	0/0:28,0:28:69.19:0,69,877	1/1:3,0:3:4.35:17,4,0
chr10	48575192	.	A	AT	2551.97	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-11.756;DP=510;FS=3.648;HRun=6;HaplotypeScore=47.4835;InbreedingCoeff=0.9521;MQ=72.89;MQ0=1;MQRankSum=-2.307;QD=30.38;ReadPosRankSum=0.166;VQSLOD=4.0855;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:39.06:0,39,384	0/0:4,0:4:12.03:0,12,122	0/0:13,0:12:20.74:0,21,170	0/0:6,0:6:9.02:0,9,92	0/0:25,0:25:69.11:0,69,684	0/0:22,0:22:60.06:0,60,587	0/0:13,0:13:39.07:0,39,386	0/0:42,0:42:99:0,108,1097	0/0:22,0:22:57.10:0,57,573	0/0:37,0:37:99:0,102,1018	0/0:31,0:31:81.14:0,81,812	0/0:9,0:9:24:0,24,227	0/0:20,0:20:54.11:0,54,544	0/0:23,0:23:63.11:0,63,631	0/0:15,0:15:39.07:0,39,391	0/0:21,0:21:57.09:0,57,562	0/0:13,0:12:30:0,30,286	0/0:9,0:9:23.91:0,24,206	1/1:1,15:16:45.13:554,45,0	1/1:2,25:27:72.15:871,72,0	1/1:0,3:3:9.03:113,9,0	0/0:13,0:13:30.05:0,30,300	0/0:12,0:12:30.07:0,30,306	0/0:5,0:5:15.03:0,15,153	0/0:14,0:14:36.06:0,36,361	0/0:26,0:26:72.14:0,72,723	1/1:4,34:38:93.30:1170,93,0	0/0:17,0:17:39.08:0,39,398
chr10	48575728	.	AT	A	770.58	PASS	AB=0.867;AC=12;AF=0.214;AN=56;BaseQRankSum=5.677;DP=498;FS=2.814;HRun=14;HaplotypeScore=59.2896;InbreedingCoeff=0.4553;MQ=79.83;MQ0=0;MQRankSum=-1.123;QD=5.43;ReadPosRankSum=1.539;VQSLOD=2.2304;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:34.73:0,35,301	0/1:7,2:9:20.14:20,0,118	0/0:19,2:18:21.01:0,21,194	0/0:15,0:13:14.65:0,15,107	0/1:24,4:28:1.62:2,0,444	0/0:14,2:16:3.71:0,4,304	0/0:17,2:19:6.87:0,7,339	0/0:25,1:29:43.27:0,43,492	0/0:10,0:10:6.43:0,6,197	0/0:22,1:24:24.12:0,24,330	0/0:15,2:18:9.68:0,10,348	0/1:8,1:11:20.31:20,0,98	0/0:10,0:10:17.95:0,18,148	0/0:16,2:18:0.87:0,1,284	0/0:12,0:14:35.72:0,36,307	0/0:20,0:20:45.03:0,45,408	0/0:30,2:32:42.83:0,43,663	0/0:12,0:12:30.01:0,30,272	1/1:6,9:17:17.18:176,17,0	1/1:7,22:29:3.76:314,4,0	1/1:2,9:11:23.80:164,24,0	0/0:14,1:16:21.28:0,21,323	0/1:15,3:18:16.73:17,0,279	0/0:13,1:14:6.43:0,6,195	0/0:21,1:22:28.25:0,28,398	0/0:23,1:24:21.42:0,21,328	1/1:5,12:19:33.74:217,34,0	0/0:6,0:8:17.85:0,18,150
chr10	48576556	.	TA	T	1475.13	PASS	AB=1.000;AC=18;AF=0.321;AN=56;BaseQRankSum=14.563;DP=571;FS=10.387;HRun=10;HaplotypeScore=89.8740;InbreedingCoeff=0.7894;MQ=72.24;MQ0=2;MQRankSum=-0.238;QD=6.96;ReadPosRankSum=2.237;VQSLOD=1.0577;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:54.07:0,54,562	0/0:22,0:22:63.16:0,63,690	0/0:25,1:19:7.12:0,7,266	0/0:20,0:17:24.01:0,24,309	1/1:23,0:23:47.46:239,47,0	0/0:28,0:28:81.20:0,81,881	0/0:10,1:11:4.08:0,4,273	0/1:30,0:32:2.47:2,0,15	0/0:14,0:14:36.09:0,36,388	1/1:20,0:20:42.59:198,43,0	1/1:27,0:27:36.13:297,36,0	0/0:17,0:17:48.12:0,48,523	0/0:15,0:15:42.11:0,42,464	1/1:18,0:18:31.57:167,32,0	0/0:30,0:30:75.19:0,75,822	0/0:21,1:22:34.12:0,34,605	1/1:12,0:12:1.02:101,1,0	0/1:10,0:9:11.84:83,0,12	0/0:24,0:24:60.13:0,60,650	0/0:19,0:19:57.04:0,57,605	0/0:13,0:13:33.08:0,33,357	0/0:15,1:16:16.06:0,16,405	0/0:18,1:19:22.47:0,22,472	0/0:12,0:12:27.07:0,27,298	1/1:24,0:24:12.98:173,13,0	1/1:21,0:21:35.49:181,35,0	0/0:29,0:29:75.19:0,75,820	1/1:25,0:24:18.83:232,19,0
chr10	48576565	.	AAC	A	3101.74	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=15.834;DP=556;FS=19.325;HRun=0;HaplotypeScore=94.1476;InbreedingCoeff=0.9739;MQ=68.76;MQ0=3;MQRankSum=0.803;QD=14.91;ReadPosRankSum=-0.465;VQSLOD=1.7157;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:65.94:0,66,903	0/0:21,0:21:63.19:0,63,1016	0/0:24,0:16:33.38:0,33,426	0/0:23,0:19:37.79:0,38,441	1/1:21,0:21:53.49:267,53,0	0/0:27,0:27:81.27:0,81,1303	0/0:11,0:11:32.89:0,33,486	1/1:4,30:34:98.09:1138,98,0	0/0:14,0:14:39.03:0,39,603	1/1:19,1:20:56.71:345,57,0	1/1:26,1:27:59.07:334,59,0	0/0:16,0:16:48.12:0,48,723	0/0:16,0:16:48.12:0,48,723	1/1:15,0:15:30.43:135,30,0	0/0:27,0:27:81.23:0,81,1234	0/0:20,0:20:60.04:0,60,959	1/1:12,0:12:21.89:98,22,0	1/1:10,0:9:3.24:75,3,0	0/0:26,0:25:75.09:0,75,1018	0/0:21,0:21:63.10:0,63,875	0/0:13,0:13:39.01:0,39,583	0/0:14,0:14:41.96:0,42,636	0/0:18,0:18:53.51:0,54,783	0/0:9,0:9:27.07:0,27,421	1/1:23,1:24:33.58:215,34,0	1/1:19,3:22:61.12:405,61,0	0/0:26,0:26:75.25:0,75,1243	1/1:22,1:22:41.41:308,41,0
chr10	48576566	.	AC	A	6384.65	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=14.745;DP=555;FS=18.138;HRun=1;HaplotypeScore=72.2859;InbreedingCoeff=0.9876;MQ=67.17;MQ0=3;MQRankSum=1.234;QD=30.84;ReadPosRankSum=-0.235;VQSLOD=3.2053;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:63.76:0,64,707	0/0:21,0:21:63.18:0,63,798	0/0:23,2:17:36.33:0,36,390	0/0:20,0:17:32.12:0,32,350	1/1:1,20:21:59.99:738,60,0	0/0:27,0:27:81.25:0,81,1027	0/0:11,0:11:24.39:0,24,366	1/1:32,2:34:94.62:666,95,0	0/0:14,0:14:39:0,39,468	1/1:1,19:20:60.08:740,60,0	1/1:2,25:27:78.13:1017,78,0	0/0:16,0:16:48.12:0,48,586	0/0:16,0:16:48.11:0,48,584	1/1:0,15:15:33.11:456,33,0	0/0:27,0:27:81.23:0,81,1004	0/0:20,0:20:56.61:0,57,736	1/1:0,11:11:24.08:331,24,0	1/1:3,6:9:7.62:253,8,0	0/0:26,0:25:75.09:0,75,853	0/0:22,0:22:65.36:0,65,742	0/0:13,0:13:39:0,39,459	0/0:14,0:14:38.53:0,39,490	0/0:19,0:19:37.48:0,37,632	0/0:9,0:9:27.07:0,27,333	1/1:2,22:24:48.12:645,48,0	1/1:3,19:22:65.97:743,66,0	0/0:26,0:26:75.23:0,75,967	1/1:5,18:22:59.29:796,59,0
chr10	48577502	.	C	CATGTATGTATGT	8420.04	PASS	AB=1.000;AC=27;AF=0.500;AN=54;BaseQRankSum=5.669;DP=465;FS=14.691;HRun=0;HaplotypeScore=167.1082;InbreedingCoeff=0.7679;MQ=64.67;MQ0=3;MQRankSum=-6.836;QD=28.16;ReadPosRankSum=-5.125;VQSLOD=1.7832;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:10.85:0,11,283	0/0:4,0:4:3.01:0,3,104	0/0:26,0:12:3.01:0,3,52	0/0:25,0:14:2.28:0,2,19	1/1:33,0:33:57.17:1658,57,0	0/0:15,0:15:21.06:0,21,567	0/0:13,0:13:12.04:0,12,362	1/1:44,0:42:57.18:1365,57,0	0/0:9,0:9:12.04:0,12,416	1/1:23,0:23:30.10:880,30,0	1/1:22,0:22:24.06:575,24,0	0/0:11,0:11:18.06:0,18,544	0/1:12,0:12:4.52:5,0,230	1/1:25,0:25:30.08:684,30,0	0/0:8,0:8:15.04:0,15,440	0/0:7,0:7:15.05:0,15,514	1/1:12,0:12:12.02:276,12,0	./.	1/1:20,0:20:12:199,12,0	1/1:13,1:14:12.03:409,12,0	1/1:13,0:13:6.02:173,6,0	0/0:6,0:6:6.02:0,6,160	0/0:8,0:8:18.06:0,18,477	0/0:5,0:5:3.01:0,3,58	1/1:16,0:16:36.12:933,36,0	1/1:30,0:30:27.30:652,27,0	1/1:12,17:29:15.04:469,15,0	1/1:6,0:6:9.03:142,9,0
chr10	48577530	.	T	TATAA	825.28	PASS	AC=16;AF=0.364;AN=44;BaseQRankSum=-3.444;DP=363;FS=9.152;HRun=0;HaplotypeScore=132.5153;InbreedingCoeff=0.6337;MQ=44.15;MQ0=7;MQRankSum=1.120;QD=10.06;ReadPosRankSum=-0.845;VQSLOD=2.5307;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,8:12:3.01:71,3,0	0/0:2,0:2:3.01:0,3,45	./.	./.	0/0:34,0:34:6.37:0,6,31	0/0:13,0:13:24.06:0,24,345	./.	0/0:40,0:38:11.58:0,12,64	0/0:6,0:6:9.03:0,9,137	0/0:18,0:18:17.02:0,17,127	0/0:22,0:22:2.67:0,3,11	1/1:5,1:6:3.01:71,3,0	1/1:3,2:5:6.02:142,6,0	0/0:18,0:18:7.70:0,8,33	0/0:5,0:5:6.02:0,6,92	0/0:6,0:6:3.01:0,3,46	0/0:12,0:12:3:0,3,28	./.	1/1:12,0:12:9.03:145,9,0	1/1:8,0:11:8.98:92,9,0	./.	./.	1/1:9,0:9:6.02:124,6,0	1/1:0,1:1:3.01:71,3,0	0/0:23,0:23:13.04:0,13,54	0/0:21,0:21:32.06:0,32,256	1/1:23,0:25:20.93:261,21,0	0/0:11,0:11:13.10:0,13,66
chr10	48577540	.	TAAATAAATAAA	T	4015.96	PASS	AB=0.687;AC=12;AF=0.214;AN=56;BaseQRankSum=-2.600;DP=288;FS=0.514;HRun=0;HaplotypeScore=120.8598;InbreedingCoeff=0.0354;MQ=44.56;MQ0=5;MQRankSum=1.810;QD=23.49;ReadPosRankSum=-5.935;VQSLOD=0.5830;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:6.02:0,6,198	0/0:3,0:3:9.03:0,9,286	0/0:13,0:3:9.03:0,9,271	0/0:12,0:1:3.01:0,3,39	0/1:22,11:33:99:194,0,461	0/0:11,0:11:33.11:0,33,1581	0/0:3,0:3:9:0,9,187	1/1:1,26:27:81.19:1225,81,0	0/0:6,0:6:18.04:0,18,650	0/1:9,10:19:99:565,0,107	0/1:8,11:19:99:327,0,112	0/0:4,0:4:12.03:0,12,375	0/0:3,0:3:9.03:0,9,356	0/1:7,1:8:20.36:20,0,175	0/0:4,0:4:12.03:0,12,455	0/0:4,0:4:12.04:0,12,555	0/1:3,8:11:4.07:105,0,4	1/1:1,0:1:3.01:44,3,0	0/0:8,0:7:21.07:0,21,918	0/0:6,0:6:15.05:0,15,476	0/0:3,0:3:6.02:0,6,76	0/0:1,0:1:3.01:0,3,39	0/0:5,0:5:15.05:0,15,633	0/0:1,0:1:3.01:0,3,159	0/1:10,12:22:99:386,0,170	0/1:11,10:21:99:929,0,103	0/0:20,0:19:27.09:0,27,1186	0/1:5,5:10:81.01:220,0,81
chr10	48577551	.	A	AT	4129.69	PASS	AB=0.885;AC=16;AF=0.296;AN=54;BaseQRankSum=7.475;DP=282;FS=5.024;HRun=1;HaplotypeScore=82.2035;InbreedingCoeff=0.6275;MQ=48.84;MQ0=6;MQRankSum=-5.846;QD=24.44;ReadPosRankSum=-2.570;VQSLOD=2.8291;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:10.21:0,10,98	0/0:4,0:4:12.04:0,12,155	0/0:8,0:4:9.02:0,9,98	0/0:10,0:2:3.85:0,4,22	1/1:15,18:33:71.86:948,72,0	0/0:10,0:10:30.10:0,30,389	0/0:2,0:2:6.02:0,6,77	0/1:26,0:26:99:376,0,184	0/0:6,0:6:18.06:0,18,233	1/1:13,5:18:45.10:538,45,0	1/1:11,5:16:38.87:471,39,0	0/0:2,0:2:4.26:0,4,42	0/0:4,0:4:8.51:0,9,84	1/1:4,7:11:21.07:311,21,0	0/0:6,0:6:15.04:0,15,180	0/0:5,0:5:15.05:0,15,195	1/1:11,0:11:2.04:6,2,0	0/0:1,0:1:2.94:0,3,18	0/0:10,0:9:22.29:0,22,221	0/0:7,0:7:17.38:0,17,181	0/0:3,0:3:5.98:0,6,59	./.	0/0:5,0:5:13.23:0,13,128	0/0:1,0:1:1.25:0,1,3	1/1:15,7:22:57.15:814,57,0	1/1:18,4:22:46.64:462,47,0	0/0:17,0:16:26.56:0,27,299	0/1:7,3:10:16.74:204,0,17
chr10	48578518	.	T	TCCCC	2934.94	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=14.337;DP=551;FS=0.349;HRun=7;HaplotypeScore=109.5360;InbreedingCoeff=0.9962;MQ=76.29;MQ0=2;MQRankSum=-0.565;QD=13.53;ReadPosRankSum=1.376;VQSLOD=-0.2789;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:60.19:0,60,915	0/0:15,0:15:42.13:0,42,635	0/0:16,0:16:42.11:0,42,627	0/0:13,0:13:25.18:0,25,346	1/1:4,0:28:65.45:402,65,0	0/0:23,0:23:66.20:0,66,1008	0/0:20,0:20:48.11:0,48,706	1/1:13,11:26:24.05:429,24,0	0/0:21,0:21:57.19:0,57,892	1/1:1,0:14:38.15:236,38,0	1/1:1,0:11:26.31:156,26,0	0/0:15,0:15:39.11:0,39,610	0/0:17,0:17:51.14:0,51,749	1/1:0,0:26:65.35:395,65,0	0/0:22,0:22:60.19:0,60,938	0/0:23,0:23:60.17:0,60,938	1/1:1,0:16:35.09:208,35,0	1/1:2,0:22:49.80:314,50,0	0/0:12,0:12:24.06:0,24,355	0/0:26,0:26:78.27:0,78,1220	0/0:10,0:10:27.08:0,27,400	0/0:15,0:15:42.13:0,42,657	0/0:25,0:25:66.20:0,66,1009	0/0:16,0:16:48.12:0,48,724	1/1:9,0:31:62.57:376,63,0	1/1:3,0:32:85.03:555,85,0	0/0:25,0:25:72.17:0,72,1053	1/1:4,0:9:14.62:87,15,0
chr10	48578872	.	AC	A	6361.58	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=11.632;DP=643;FS=14.235;HRun=3;HaplotypeScore=70.4246;InbreedingCoeff=0.9994;MQ=72.95;MQ0=0;MQRankSum=-2.172;QD=30.44;ReadPosRankSum=2.382;VQSLOD=3.4267;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,105,1427	0/0:14,0:14:42.14:0,42,605	0/0:22,0:22:57.32:0,57,769	0/0:21,0:20:24.25:0,24,605	1/1:2,15:17:36.11:446,36,0	0/0:16,0:16:48.11:0,48,619	0/0:22,0:22:63.18:0,63,869	1/1:2,23:25:51.19:802,51,0	0/0:27,0:27:78.25:0,78,1105	1/1:1,13:14:39.12:480,39,0	1/1:0,12:12:30.08:365,30,0	0/0:25,0:25:72.23:0,72,1018	0/0:27,0:27:75.24:0,75,1049	1/1:1,32:33:87.27:1076,87,0	0/0:34,0:34:99:0,99,1425	0/0:24,0:24:72.22:0,72,1004	1/1:0,41:41:99:1264,102,0	1/1:2,18:20:45.14:558,45,0	0/0:22,0:21:60.14:0,60,775	0/0:19,0:19:54.15:0,54,733	0/0:43,0:43:99:0,117,1610	0/0:11,0:11:30:0,30,385	0/0:13,0:13:33.06:0,33,401	0/0:29,0:29:87.28:0,87,1233	1/1:4,17:21:45.14:556,45,0	1/1:1,12:13:33.10:407,33,0	0/0:27,0:27:81.26:0,81,1141	1/1:0,13:13:33.10:409,33,0
chr10	48579084	.	A	AC	7345.28	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=3.275;DP=608;FS=9.987;HRun=4;HaplotypeScore=74.5562;InbreedingCoeff=0.9989;MQ=78.53;MQ0=1;MQRankSum=0.273;QD=30.10;ReadPosRankSum=-0.073;VQSLOD=4.3866;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,104,1130	0/0:10,0:10:27.03:0,27,278	0/0:25,0:23:45.92:0,46,384	0/0:17,0:16:29.95:0,30,271	1/1:1,26:27:65.73:734,66,0	0/0:21,0:21:57.09:0,57,603	0/0:21,0:21:57.15:0,57,634	1/1:8,29:37:87.22:1125,87,0	0/0:11,0:11:30.07:0,30,330	1/1:2,26:28:77.15:958,77,0	1/1:0,13:13:35.98:442,36,0	0/0:18,0:18:51.11:0,51,550	0/0:27,0:27:78.16:0,78,840	1/1:1,12:13:21.07:283,21,0	0/0:15,0:15:29.99:0,30,316	0/0:23,0:23:55.99:0,56,652	1/1:0,26:26:45.15:614,45,0	1/1:3,28:31:39.41:754,39,0	0/0:19,0:19:48.12:0,48,529	0/0:23,0:23:69.16:0,69,753	0/0:16,0:16:45.11:0,45,494	0/0:20,0:20:48.03:0,48,483	0/0:15,0:15:45.04:0,45,466	0/0:19,0:19:51.09:0,51,538	1/1:0,22:22:51.17:696,51,0	1/1:1,34:35:99:1288,102,0	0/0:25,0:25:72.12:0,72,770	1/1:0,12:12:33.11:450,33,0
chr10	48580050	.	TTAAGGAAC	T	11353.17	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=15.870;DP=512;FS=2.620;HRun=0;HaplotypeScore=135.2165;InbreedingCoeff=0.9826;MQ=75.28;MQ0=0;MQRankSum=-14.551;QD=64.88;ReadPosRankSum=1.225;VQSLOD=4.8363;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:51.18:0,51,2238	0/0:5,0:5:15.05:0,15,617	0/0:10,0:10:27.08:0,27,995	0/0:15,0:15:42.14:0,42,1515	1/1:0,23:23:60.08:1520,60,0	0/0:21,0:21:60.21:0,60,2674	0/0:13,0:13:39.13:0,39,1668	0/0:28,0:28:84.28:0,84,3483	0/0:13,0:13:39.13:0,39,1685	1/1:1,25:26:75.26:2065,75,0	1/1:1,19:20:41.93:923,42,0	0/0:14,0:14:42.14:0,42,1839	0/0:25,0:25:72.25:0,72,3208	1/1:1,15:16:36.12:1030,36,0	0/0:18,0:18:51.18:0,51,2213	0/0:20,0:20:60.21:0,60,2600	1/1:2,13:15:33.03:817,33,0	1/1:1,5:6:9.03:258,9,0	0/0:15,0:15:45.15:0,45,2013	0/0:28,0:28:84.29:0,84,3722	0/0:17,0:17:51.18:0,51,2215	0/0:7,0:7:21.06:0,21,830	0/0:21,0:21:57.20:0,57,2471	0/0:12,0:12:33.11:0,33,1366	1/1:3,25:28:69.24:1974,69,0	1/1:2,32:34:93.27:2422,93,0	0/0:36,0:36:99:0,105,4458	1/1:0,7:7:12.04:344,12,0
chr10	48581471	.	GTTTCTTGCTATTAACTAATATTAATA	G	13893.02	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=11.688;DP=449;FS=2.223;HRun=0;HaplotypeScore=299.4696;InbreedingCoeff=0.9386;MQ=75.22;MQ0=0;MQRankSum=-10.359;QD=112.95;ReadPosRankSum=2.815;VQSLOD=4.3612;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:57.20:0,57,5452	0/0:10,0:10:30.10:0,30,3022	0/0:11,0:11:33.11:0,33,1819	0/0:10,0:10:26.80:0,27,1208	1/1:7,13:22:48.15:2919,48,0	0/0:20,0:19:57.20:0,57,6021	0/0:10,0:9:27.09:0,27,2559	1/1:9,7:15:18.06:598,18,0	0/0:24,0:24:69.24:0,69,7088	1/1:9,8:17:27.09:1735,27,0	1/1:3,6:9:12.04:767,12,0	0/0:17,0:17:51.18:0,51,5540	0/0:23,0:23:41.49:0,41,6186	1/1:2,9:10:24.08:1695,24,0	0/0:15,0:15:45.15:0,45,4688	0/0:25,0:25:75.25:0,75,7738	1/1:0,7:7:9.03:636,9,0	1/1:1,0:1:3.01:121,3,0	0/0:26,0:26:75.23:0,75,7003	0/0:26,0:26:72.25:0,72,7309	0/0:13,0:13:39.13:0,39,4166	0/0:18,0:18:54.19:0,54,5377	0/0:21,0:21:63.22:0,63,6526	0/0:5,0:4:15.05:0,15,1295	1/1:7,18:25:57.19:3881,57,0	1/1:6,5:11:18.06:1127,18,0	0/0:31,0:31:93.32:0,93,9712	1/1:2,2:4:6.02:414,6,0
chr10	48581571	.	AT	A	5581.81	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=13.159;DP=606;FS=27.256;HRun=10;HaplotypeScore=66.0832;InbreedingCoeff=0.9884;MQ=67.81;MQ0=0;MQRankSum=-2.425;QD=21.89;ReadPosRankSum=1.237;VQSLOD=3.6157;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,1:17:15.83:0,16,364	0/0:18,1:19:22.08:0,22,472	0/0:10,0:10:10.52:0,11,91	0/0:8,0:8:15.58:0,16,156	1/1:1,42:44:99:996,116,0	0/0:22,1:23:31.06:0,31,558	0/0:12,0:12:30:0,30,315	1/1:8,26:34:77.95:676,78,0	0/0:20,0:21:59.97:0,60,629	1/1:4,27:31:83.96:727,84,0	1/1:2,30:32:83.97:729,84,0	0/0:19,1:20:34.11:0,34,605	0/0:24,0:24:72.19:0,72,796	1/1:0,23:23:65.99:573,66,0	0/0:27,0:26:75.18:0,75,814	0/0:26,0:26:60.11:0,60,641	1/1:1,10:12:29.03:240,29,0	1/1:0,9:9:26.99:234,27,0	0/0:20,0:22:59.79:0,60,602	0/0:40,1:42:85.02:0,85,1128	0/0:19,0:19:57.15:0,57,630	0/0:8,0:8:24.06:0,24,265	0/0:19,0:19:51.12:0,51,549	0/0:15,0:15:42.11:0,42,465	1/1:7,28:35:77.97:677,78,0	1/1:3,16:19:47.97:417,48,0	0/0:19,0:19:51.14:0,51,564	1/1:4,12:16:35.97:313,36,0
chr10	48582035	.	CA	C	369.64	PASS	AB=0.900;AC=3;AF=0.054;AN=56;BaseQRankSum=3.228;DP=524;FS=3.282;HRun=7;HaplotypeScore=59.3627;InbreedingCoeff=0.6963;MQ=57.85;MQ0=3;MQRankSum=-5.881;QD=12.32;ReadPosRankSum=-4.515;VQSLOD=1.7722;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,1:22:28.23:0,28,650	0/0:7,0:7:18.05:0,18,215	0/1:8,0:8:3.31:3,0,171	0/0:19,0:8:14.98:0,15,178	0/0:36,0:36:99:0,105,1282	0/0:21,0:21:63.09:0,63,733	0/0:6,0:6:12.04:0,12,150	1/1:3,18:20:48.05:464,48,0	0/0:19,0:19:54.17:0,54,679	0/0:11,0:11:30.09:0,30,367	0/0:24,0:24:72.22:0,72,893	0/0:12,0:11:30.10:0,30,377	0/0:13,0:13:39.12:0,39,491	0/0:17,0:17:45.12:0,45,537	0/0:13,0:13:39.12:0,39,491	0/0:17,0:17:48.13:0,48,578	0/0:26,0:26:78.25:0,78,978	0/0:15,0:15:42.13:0,42,527	0/0:32,0:24:69.20:0,69,852	0/0:36,0:36:99:0,102,1271	0/0:10,0:10:24.08:0,24,302	0/0:13,0:13:33.11:0,33,415	0/0:23,0:23:66.18:0,66,792	0/0:15,0:15:42.05:0,42,494	0/0:28,0:28:78.21:0,78,940	0/0:22,0:22:60.18:0,60,744	0/0:31,0:31:78.22:0,78,946	0/0:6,0:6:18.06:0,18,226
chr10	48583837	.	AAAG	A	8170.89	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=16.046;DP=552;FS=3.010;HRun=0;HaplotypeScore=88.2895;InbreedingCoeff=0.9956;MQ=57.20;MQ0=1;MQRankSum=-3.700;QD=45.65;ReadPosRankSum=2.992;VQSLOD=6.9212;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,99,2236	0/0:7,0:7:21.07:0,21,484	0/0:23,0:18:51.17:0,51,1101	0/0:24,0:22:63.22:0,63,1343	1/1:1,10:11:27.05:429,27,0	0/0:16,0:16:48.13:0,48,1017	0/0:20,0:20:60.21:0,60,1352	1/1:0,21:21:63.19:1023,63,0	0/0:16,0:16:45.15:0,45,1037	1/1:0,17:17:51.17:868,51,0	1/1:0,9:9:18.06:307,18,0	0/0:17,0:17:51.16:0,51,1130	0/0:24,0:24:72.25:0,72,1645	1/1:2,21:22:57.20:971,57,0	0/0:30,0:30:87.27:0,87,1918	0/0:17,0:17:51.18:0,51,1176	1/1:0,25:25:72.25:1227,72,0	1/1:3,27:30:51.07:1300,51,0	0/0:15,0:15:42.14:0,42,968	0/0:16,0:16:45.14:0,45,994	0/0:30,0:30:87.28:0,87,1961	0/0:18,0:18:54.17:0,54,1201	0/0:13,0:13:36.12:0,36,830	0/0:25,0:25:69.24:0,69,1591	1/1:0,15:15:39.13:665,39,0	1/1:0,22:22:66.23:1124,66,0	0/0:27,0:27:78.27:0,78,1779	1/1:0,6:6:15.05:256,15,0
chr10	48583987	.	GGGGTGGGTGTA	G	4498.45	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=8.535;DP=237;FS=2.780;HRun=0;HaplotypeScore=78.6355;InbreedingCoeff=0.8611;MQ=57.76;MQ0=2;MQRankSum=-8.749;QD=63.36;ReadPosRankSum=-0.124;VQSLOD=4.0975;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:42.14:0,42,2175	0/0:4,0:4:12.03:0,12,531	0/0:9,0:7:18.06:0,18,778	0/0:16,0:9:27.09:0,27,1203	1/1:2,6:8:18.06:504,18,0	0/0:6,0:6:15.05:0,15,839	0/0:6,0:6:12:0,12,443	1/1:1,4:5:12.04:350,12,0	0/0:7,0:7:15.05:0,15,839	1/1:1,5:6:15.05:452,15,0	1/1:2,2:4:3.01:36,3,0	0/0:7,0:7:18.06:0,18,910	0/0:7,0:7:18.06:0,18,882	1/1:3,15:18:39.09:1328,39,0	0/0:13,0:13:33.11:0,33,1565	0/0:11,0:11:27.09:0,27,1419	1/1:1,7:8:18.06:552,18,0	1/1:4,2:6:9.03:248,9,0	0/0:6,0:5:15.05:0,15,718	0/0:14,0:14:33.11:0,33,1848	0/0:24,0:24:45.14:0,45,2175	0/0:4,0:4:9.03:0,9,391	0/0:8,0:8:18.05:0,18,853	0/0:3,0:3:3.01:0,3,168	1/1:2,5:6:9.03:308,9,0	1/1:3,5:8:18.06:617,18,0	0/0:5,0:5:15.05:0,15,726	1/1:0,1:1:3.01:103,3,0
chr10	48587828	.	TA	T	7587.09	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=14.482;DP=740;FS=3.901;HRun=4;HaplotypeScore=72.3298;InbreedingCoeff=0.9973;MQ=66.12;MQ0=0;MQRankSum=-0.400;QD=30.59;ReadPosRankSum=1.725;VQSLOD=5.2672;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:95.55:0,96,1518	0/0:9,0:9:24.07:0,24,311	0/0:25,0:24:63.07:0,63,829	0/0:21,0:19:51.16:0,51,669	1/1:2,27:29:72.12:826,72,0	0/0:30,0:30:81.26:0,81,1116	0/0:37,0:37:99:0,111,1499	1/1:2,26:28:78.21:910,78,0	0/0:20,0:20:60.19:0,60,822	1/1:3,28:31:87.24:1018,87,0	1/1:2,19:21:51.16:609,51,0	0/0:31,0:31:93.30:0,93,1287	0/0:33,0:33:99:0,99,1386	1/1:1,26:27:69.21:828,69,0	0/0:33,0:33:96.31:0,96,1327	0/0:28,0:28:81.27:0,81,1134	1/1:3,23:26:63.19:756,63,0	1/1:1,18:19:48.15:576,48,0	0/0:20,0:20:60.19:0,60,825	0/0:34,0:33:93.23:0,93,1230	0/0:36,0:36:99:0,105,1469	0/0:19,0:19:54.17:0,54,740	0/0:22,0:22:66.19:0,66,871	0/0:22,0:22:60.20:0,60,840	1/1:1,29:30:66.20:792,66,0	1/1:1,31:32:93.26:1093,93,0	0/0:32,0:32:87.29:0,87,1217	1/1:0,5:5:15.05:180,15,0
chr10	48588563	.	AGAAAAG	A	5460.51	PASS	AB=0.763;AC=20;AF=0.357;AN=56;BaseQRankSum=12.853;DP=430;FS=17.270;HRun=0;HaplotypeScore=90.1401;InbreedingCoeff=0.8382;MQ=56.62;MQ0=12;MQRankSum=-5.257;QD=30.68;ReadPosRankSum=-1.013;VQSLOD=2.8726;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,120,3059	0/0:10,0:10:30.10:0,30,916	0/0:18,0:6:10.74:0,11,175	0/1:17,0:9:1.44:1,0,204	1/1:2,18:20:38.77:460,39,0	0/0:14,0:14:39.08:0,39,974	0/0:11,0:10:30.10:0,30,946	1/1:13,7:19:53.88:851,54,0	0/0:17,0:15:45.14:0,45,1302	1/1:2,22:23:65.99:1049,66,0	1/1:0,11:11:21.07:443,21,0	0/0:15,0:15:42.07:0,42,1141	0/0:8,0:8:24.08:0,24,705	1/1:0,16:16:15.05:378,15,0	0/0:7,0:6:18.05:0,18,476	0/0:9,0:9:27.09:0,27,728	0/1:2,18:20:11.03:448,0,11	1/1:2,12:14:26.46:508,26,0	0/0:24,0:24:72.13:0,72,1805	0/0:13,0:13:39.13:0,39,994	0/0:8,0:7:21.06:0,21,619	0/0:9,0:9:20.92:0,21,445	0/0:5,0:5:15.05:0,15,450	0/0:16,0:15:36.12:0,36,1083	1/1:1,16:17:16.61:371,17,0	1/1:0,16:16:47.90:876,48,0	0/0:25,0:25:64.94:0,65,1669	1/1:0,2:2:3.01:76,3,0
chr10	48588576	.	A	AG	2386.03	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=9.736;DP=472;FS=25.277;HRun=0;HaplotypeScore=73.5259;InbreedingCoeff=0.9375;MQ=65.83;MQ0=8;MQRankSum=-3.820;QD=13.71;ReadPosRankSum=-1.053;VQSLOD=1.7606;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,108,1398	0/0:12,0:12:34.92:0,35,448	0/0:25,0:12:30.19:0,30,190	0/0:24,0:15:27.79:0,28,316	1/1:21,1:22:38.33:284,38,0	0/0:16,0:16:21.98:0,22,353	0/0:11,0:11:33.10:0,33,445	1/1:19,7:26:69.53:615,70,0	0/0:18,0:16:48.10:0,48,617	1/1:29,0:27:67.42:571,67,0	1/1:12,1:13:29.21:209,29,0	0/0:14,0:14:39.12:0,39,515	0/0:11,0:11:33.09:0,33,415	1/1:15,0:15:18.61:128,19,0	0/0:9,0:9:24.07:0,24,306	0/0:9,0:9:24.08:0,24,335	1/1:21,0:21:1.90:132,2,0	1/1:12,0:12:23.35:138,23,0	0/0:25,0:25:67.63:0,68,905	0/0:17,0:17:48.08:0,48,597	0/0:9,0:9:24.06:0,24,304	0/0:9,0:9:18.02:0,18,213	0/0:10,0:10:30.05:0,30,374	0/0:17,0:16:30.04:0,30,478	1/1:16,1:17:23.45:154,23,0	1/1:16,1:17:44.24:349,44,0	0/0:21,0:20:56.85:0,57,699	1/1:2,0:2:2.90:16,3,0
chr10	48588823	.	AAAAAC	A	1105.58	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.253;DP=534;FS=9.209;HRun=0;HaplotypeScore=98.3419;InbreedingCoeff=0.9016;MQ=70.73;MQ0=0;MQRankSum=-4.666;QD=39.48;ReadPosRankSum=-2.912;VQSLOD=2.2736;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:72.23:0,72,2013	0/0:11,0:11:33.11:0,33,970	0/0:15,0:14:30.10:0,30,626	0/0:17,0:13:27.05:0,27,546	0/0:17,0:17:39.13:0,39,977	0/0:20,0:20:60.21:0,60,1764	0/0:26,0:26:63.22:0,63,1821	1/1:6,22:28:63.22:1200,63,0	0/0:17,0:17:45.15:0,45,1287	0/0:22,0:22:60.21:0,60,1712	0/0:18,0:18:33.11:0,33,970	0/0:20,0:20:39.13:0,39,1145	0/0:20,0:20:48.16:0,48,1411	0/0:17,0:17:42.14:0,42,1228	0/0:18,0:18:51.18:0,51,1478	0/0:23,0:23:63.22:0,63,1783	0/0:27,0:27:78.27:0,78,2269	0/0:19,0:19:54.19:0,54,1565	0/0:18,0:18:36.11:0,36,952	0/0:17,0:17:48.16:0,48,1279	0/0:19,0:19:57.19:0,57,1511	0/0:10,0:10:27.09:0,27,793	0/0:12,0:12:27.09:0,27,794	0/0:25,0:25:66.23:0,66,1790	0/0:16,0:16:48.16:0,48,1365	0/0:30,0:30:72.21:0,72,2048	0/0:23,0:23:66.23:0,66,1782	0/0:2,0:2:6.01:0,6,114
chr10	48590199	.	TA	T	1772.98	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=1.640;DP=471;FS=4.083;HRun=15;HaplotypeScore=54.4457;InbreedingCoeff=0.8306;MQ=63.08;MQ0=2;MQRankSum=0.495;QD=8.44;ReadPosRankSum=3.371;VQSLOD=2.9210;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:25.51:0,26,193	0/0:9,0:9:22.24:0,22,184	0/0:20,0:10:10.32:0,10,51	0/0:18,0:7:5.98:0,6,47	1/1:9,18:27:15.25:194,15,0	0/0:23,0:25:53.62:0,54,436	0/0:9,0:9:12:0,12,105	0/1:30,0:28:49.98:50,0,78	0/0:10,1:11:26.95:0,27,230	1/1:10,16:26:41.17:264,41,0	1/1:5,14:19:38.35:250,38,0	0/0:10,0:10:15:0,15,132	0/0:14,0:14:17.97:0,18,150	1/1:4,13:17:26.47:173,26,0	0/0:18,0:18:39.86:0,40,339	0/0:12,1:13:10.70:0,11,208	1/1:2,11:13:6.46:166,6,0	1/1:4,10:14:23.57:154,24,0	0/0:10,0:9:17.97:0,18,149	0/0:21,3:24:14.22:0,14,257	0/0:16,2:18:19.70:0,20,289	0/0:5,0:5:14.99:0,15,128	0/0:13,0:15:14.75:0,15,105	0/0:5,0:5:0.89:0,1,2	1/1:3,17:20:38.37:250,38,0	1/1:8,22:30:26.63:299,27,0	0/0:13,1:20:19.33:0,19,263	1/1:2,12:14:20.73:181,21,0
chr10	48590212	.	A	AAG	768.52	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=-3.799;DP=507;FS=0.557;HRun=0;HaplotypeScore=73.7940;InbreedingCoeff=0.3610;MQ=67.24;MQ0=2;MQRankSum=0.319;QD=8.01;ReadPosRankSum=-3.510;VQSLOD=2.1488;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:40.55:0,41,383	0/0:9,0:9:24.05:0,24,279	0/1:19,0:14:1.15:1,0,165	0/0:17,0:9:14.24:0,14,176	0/0:26,0:27:20.71:0,21,366	0/0:26,0:26:68.84:0,69,712	0/0:11,0:11:27.01:0,27,280	1/1:7,28:35:70.63:861,71,0	0/0:12,0:12:36.02:0,36,393	0/1:24,0:24:1.03:1,0,316	0/0:22,0:22:46.43:0,46,472	0/0:12,0:12:27.05:0,27,298	0/0:13,0:13:36.01:0,36,369	0/0:18,0:18:13.55:0,14,206	0/0:17,0:17:42.99:0,43,503	0/0:15,0:15:42.01:0,42,423	0/0:16,0:16:3.30:0,3,236	0/1:16,0:16:5.70:6,0,161	0/0:14,0:13:38.99:0,39,354	0/0:22,0:22:44.23:0,44,461	0/0:20,0:20:51.04:0,51,534	0/0:5,0:5:15.03:0,15,177	0/0:15,0:15:38.78:0,39,320	0/0:5,0:5:6.72:0,7,53	0/0:21,0:21:9.24:0,9,278	0/0:33,0:33:6.91:0,7,508	0/0:23,0:23:50.74:0,51,468	0/0:17,0:17:38.77:0,39,305
chr10	48591052	.	GGAA	G	5707.78	PASS	AB=0.983;AC=24;AF=0.444;AN=54;BaseQRankSum=9.618;DP=425;FS=8.063;HRun=0;HaplotypeScore=78.0301;InbreedingCoeff=0.6645;MQ=46.44;MQ0=48;MQRankSum=-1.045;QD=22.38;ReadPosRankSum=7.348;VQSLOD=3.4489;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:18:43.25:0,43,391	./.	0/0:10,0:2:5.37:0,5,33	0/0:6,0:5:8.43:0,8,73	1/1:11,13:23:30.11:532,30,0	0/0:17,0:16:35.92:0,36,338	0/0:13,0:11:26.58:0,27,187	1/1:5,17:18:44.14:459,44,0	0/0:13,0:10:26.94:0,27,252	1/1:9,10:18:21.93:530,22,0	1/1:10,5:15:35.50:367,35,0	0/0:14,0:12:36.01:0,36,399	0/0:15,0:15:44.60:0,45,443	1/1:8,6:13:32.83:364,33,0	0/0:14,0:13:30.03:0,30,317	0/0:7,0:5:11.98:0,12,112	1/1:19,19:35:92.72:1172,93,0	1/1:4,11:12:33.10:507,33,0	0/1:11,0:10:65.76:87,0,66	0/1:8,0:7:34.40:56,0,34	0/1:11,0:11:35.19:103,0,35	0/0:7,0:6:12.01:0,12,113	0/0:12,0:10:21.01:0,21,204	0/0:18,0:15:33.40:0,33,331	1/1:1,18:18:26.99:396,27,0	1/1:14,14:24:68.89:881,69,0	0/1:13,0:13:16.67:17,0,99	1/1:12,4:6:18.03:238,18,0
chr10	48591143	.	TAACA	T	7514.65	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=15.632;DP=456;FS=2.749;HRun=0;HaplotypeScore=91.6103;InbreedingCoeff=0.9938;MQ=82.29;MQ0=0;MQRankSum=-6.104;QD=44.47;ReadPosRankSum=1.604;VQSLOD=5.5219;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:54.14:0,54,1326	0/0:5,0:5:15.05:0,15,395	0/0:17,0:17:48.16:0,48,1195	0/0:13,0:13:33.11:0,33,815	1/1:3,25:28:63.21:1137,63,0	0/0:17,0:17:48.16:0,48,1268	0/0:13,0:13:39.13:0,39,1021	0/0:28,0:27:72.24:0,72,1849	0/0:8,0:8:24.08:0,24,635	1/1:6,15:21:48.16:865,48,0	1/1:0,11:11:33.11:585,33,0	0/0:17,0:17:51.18:0,51,1343	0/0:16,0:16:48.16:0,48,1265	1/1:2,17:19:45.15:791,45,0	0/0:9,0:9:21.07:0,21,555	0/0:15,0:15:45.15:0,45,1180	1/1:2,18:20:45.15:828,45,0	1/1:2,15:17:45.15:826,45,0	0/0:13,0:13:36.12:0,36,919	0/0:21,0:21:60.21:0,60,1582	0/0:19,0:19:57.20:0,57,1486	0/0:6,0:6:15.05:0,15,396	0/0:17,0:17:48.16:0,48,1256	0/0:13,0:13:39.13:0,39,1014	1/1:2,22:24:60.21:1104,60,0	1/1:2,16:18:48.16:883,48,0	0/0:19,0:19:51.18:0,51,1345	1/1:0,11:11:27.09:497,27,0
chr10	48591764	.	T	TAAA	4962.25	PASS	AB=0.938;AC=21;AF=0.375;AN=56;BaseQRankSum=8.179;DP=598;FS=0.414;HRun=14;HaplotypeScore=130.0515;InbreedingCoeff=0.8701;MQ=73.44;MQ0=1;MQRankSum=-4.874;QD=19.85;ReadPosRankSum=-4.365;VQSLOD=2.3378;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:30:60.47:0,60,539	0/0:3,0:3:2.88:0,3,31	0/0:28,0:18:13.85:0,14,106	0/0:24,0:19:3.91:0,4,90	1/1:18,14:40:65.82:828,66,0	0/0:20,0:24:41.62:0,42,375	0/1:12,1:15:16.55:17,0,268	1/1:26,5:29:41.60:581,42,0	0/0:11,0:13:23.63:0,24,219	1/1:15,15:35:60.47:891,60,0	1/1:9,4:17:29.77:319,30,0	0/0:15,0:15:32.83:0,33,319	0/0:14,0:16:37.95:0,38,335	1/1:6,5:18:30.06:420,30,0	0/0:27,0:30:48.77:0,49,482	0/0:30,0:30:56.60:0,57,571	1/1:6,10:20:24.03:358,24,0	1/1:5,2:14:15.03:221,15,0	0/0:19,0:22:23.61:0,24,244	0/0:25,0:30:46.37:0,46,476	0/0:12,0:12:23.81:0,24,238	0/0:12,0:15:29.82:0,30,294	0/0:15,0:16:26.68:0,27,264	0/0:9,0:12:20.80:0,21,202	1/1:15,6:25:42.06:563,42,0	1/1:13,7:22:37.60:492,38,0	0/0:23,0:26:38.48:0,38,376	1/1:3,8:13:18.04:274,18,0
chr10	48592843	.	GCACA	G	755.21	PASS	AB=0.823;AC=7;AF=0.125;AN=56;BaseQRankSum=9.117;DP=610;FS=70.356;HRun=0;HaplotypeScore=133.6581;InbreedingCoeff=-0.1431;MQ=67.32;MQ0=8;MQRankSum=-7.280;QD=5.68;ReadPosRankSum=-0.708;VQSLOD=-0.3863;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:40:99:0,108,3067	0/0:5,0:5:15.05:0,15,433	0/0:34,0:18:51.02:0,51,1313	0/0:43,0:29:43.16:0,43,1775	0/0:22,3:24:49.82:0,50,1471	0/0:26,0:26:78.27:0,78,2268	0/0:17,0:17:48.13:0,48,1391	0/0:16,0:16:45.15:0,45,1269	0/0:15,0:15:42.14:0,42,1214	0/1:21,4:25:99:124,0,1666	0/0:13,2:15:35.79:0,36,1029	0/0:19,1:20:54.19:0,54,1549	0/0:24,0:24:72.25:0,72,2030	0/0:13,3:16:36.10:0,36,1025	0/0:20,0:20:60.21:0,60,1710	0/0:17,0:17:51.18:0,51,1478	0/1:12,2:15:15.49:15,0,710	0/1:9,2:11:76.93:77,0,561	0/1:14,3:16:99:120,0,1069	0/0:19,8:26:31.49:0,31,1453	0/0:22,0:22:35.03:0,35,1039	0/0:17,0:17:51.18:0,51,1444	0/0:30,0:29:84.29:0,84,2416	0/0:33,0:33:96.32:0,96,2753	0/0:9,5:13:23.48:0,23,683	0/1:18,9:26:99:391,0,1311	0/1:23,5:27:99:102,0,1631	0/1:7,3:10:56.61:57,0,568
chr10	48595034	.	TAATA	T	1726.79	PASS	AC=8;AF=0.148;AN=54;BaseQRankSum=-0.414;DP=372;FS=1.406;HRun=0;HaplotypeScore=82.9670;InbreedingCoeff=0.8291;MQ=43.39;MQ0=24;MQRankSum=-7.653;QD=30.29;ReadPosRankSum=-0.271;VQSLOD=3.4459;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:24:30.10:0,30,786	0/0:6,0:6:18.03:0,18,410	0/0:2,0:2:6.02:0,6,136	0/0:3,0:1:3.01:0,3,71	0/0:22,0:22:57.20:0,57,1456	0/0:15,0:14:24.08:0,24,611	0/0:10,0:8:15:0,15,314	0/0:32,0:16:39.09:0,39,887	0/0:14,0:12:18.06:0,18,471	0/0:27,0:26:75.20:0,75,1896	0/0:14,0:13:36.12:0,36,920	0/0:8,0:6:12.04:0,12,314	0/0:13,0:12:30.02:0,30,700	0/0:7,0:7:18.06:0,18,464	0/0:11,0:11:12.04:0,12,309	0/0:16,0:15:33.11:0,33,857	0/0:14,0:13:27.09:0,27,651	0/0:20,0:19:54.12:0,54,1287	1/1:5,9:11:30.05:508,30,0	1/1:11,11:21:39:622,39,0	1/1:0,4:3:6.02:104,6,0	./.	0/0:4,0:3:8.95:0,9,143	0/0:4,0:3:6.02:0,6,157	0/0:21,0:21:51.11:0,51,1232	0/0:19,0:18:48.16:0,48,1253	1/1:3,14:15:36.12:644,36,0	0/0:6,0:6:18.06:0,18,471
chr10	48595053	.	T	TA	2235.78	PASS	AB=1.000;AC=26;AF=0.464;AN=56;BaseQRankSum=11.393;DP=372;FS=1.585;HRun=7;HaplotypeScore=77.6478;InbreedingCoeff=0.7365;MQ=54.66;MQ0=10;MQRankSum=-3.600;QD=9.16;ReadPosRankSum=2.140;VQSLOD=1.2937;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:25:42.06:0,42,405	0/0:8,0:8:24.03:0,24,228	0/0:8,0:7:17.49:0,17,138	0/0:6,0:3:2.41:0,2,52	1/1:29,0:29:24.03:133,24,0	0/0:18,0:17:33.05:0,33,319	0/0:8,0:8:9.01:0,9,87	0/1:20,0:15:11.52:12,0,30	0/0:11,0:10:15.02:0,15,145	1/1:30,0:29:21.99:165,22,0	1/1:17,0:17:24.81:87,25,0	0/0:7,0:5:12.02:0,12,116	0/0:11,0:10:27.02:0,27,251	1/1:8,0:8:12.78:45,13,0	0/0:5,0:5:12.02:0,12,116	0/0:12,0:11:27.04:0,27,261	1/1:12,0:11:8.95:33,9,0	1/1:26,0:25:24.15:118,24,0	1/1:5,12:13:36.11:434,36,0	1/1:2,14:15:42.13:507,42,0	1/1:0,2:2:6.02:72,6,0	0/0:1,0:1:3:0,3,29	0/0:2,0:1:3:0,3,29	0/0:5,0:4:12.02:0,12,116	1/1:21,0:21:43.83:157,44,0	0/1:17,0:17:16.70:77,0,17	1/1:5,15:19:45.14:542,45,0	1/1:9,0:9:18.47:65,18,0
chr10	48595060	.	AT	A	4300.27	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=7.757;DP=371;FS=0.000;HRun=1;HaplotypeScore=73.2623;InbreedingCoeff=0.9186;MQ=56.63;MQ0=2;MQRankSum=-1.078;QD=22.40;ReadPosRankSum=1.788;VQSLOD=4.8546;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:24:42.13:0,42,600	0/0:10,0:10:30.07:0,30,393	0/0:8,0:7:11.54:0,12,173	0/0:6,0:3:8.86:0,9,100	1/1:3,23:31:64.93:664,65,0	0/0:15,0:14:33.11:0,33,471	0/0:5,0:5:9.03:0,9,128	1/1:8,11:17:29.10:303,29,0	0/0:10,0:10:21.03:0,21,262	1/1:6,25:30:63.14:734,63,0	1/1:3,12:16:44.89:388,45,0	0/0:8,0:6:15.04:0,15,197	0/0:11,0:10:30.08:0,30,392	1/1:2,6:8:20.97:185,21,0	0/0:4,0:4:12.04:0,12,171	0/0:11,0:10:27.09:0,27,384	1/1:5,7:11:26.91:221,27,0	1/1:5,21:25:54.82:553,55,0	0/0:15,0:14:32.21:0,32,224	0/0:19,0:18:49.76:0,50,304	0/0:4,0:4:11.84:0,12,82	0/0:2,0:2:5.99:0,6,64	0/0:3,0:2:3.01:0,3,43	0/0:5,0:4:12.04:0,12,171	1/1:5,19:24:69.05:649,69,0	1/1:4,13:17:23.51:377,24,0	0/0:18,0:18:40.11:0,40,262	1/1:0,8:8:24.02:226,24,0
chr10	48595062	.	AAT	A	4392.83	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=7.706;DP=371;FS=0.000;HRun=0;HaplotypeScore=81.3018;InbreedingCoeff=0.9243;MQ=59.04;MQ0=1;MQRankSum=-1.032;QD=22.53;ReadPosRankSum=2.175;VQSLOD=5.3414;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:22:42.14:0,42,811	0/0:10,0:10:30.10:0,30,577	0/0:8,0:7:15.93:0,16,260	0/0:6,0:4:7.58:0,8,120	1/1:8,23:31:65.63:728,66,0	0/0:16,0:15:33.11:0,33,638	0/0:4,0:4:9.03:0,9,174	1/1:7,11:17:10.20:278,10,0	0/0:8,0:8:21.07:0,21,402	1/1:7,25:31:49.06:764,49,0	1/1:3,12:15:38.99:362,39,0	0/0:6,0:5:15.05:0,15,288	0/0:10,0:10:27.09:0,27,499	1/1:4,6:10:20.97:190,21,0	0/0:5,0:5:15.05:0,15,269	0/0:11,0:10:27.09:0,27,522	1/1:4,7:11:26.93:228,27,0	1/1:6,21:27:46.05:564,46,0	0/0:16,0:15:43.96:0,44,775	0/0:18,0:18:51.17:0,51,968	0/0:4,0:4:12.04:0,12,222	0/0:5,0:5:15.05:0,15,225	0/0:3,0:3:6.02:0,6,95	0/0:4,0:4:12.04:0,12,232	1/1:6,19:25:70.90:673,71,0	1/1:5,13:18:6.74:373,7,0	0/0:19,0:19:50.46:0,50,902	1/1:0,8:8:24.03:233,24,0
chr10	48596139	.	AT	A	8516.94	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=13.748;DP=528;FS=14.840;HRun=1;HaplotypeScore=51.1432;InbreedingCoeff=0.9969;MQ=83.05;MQ0=0;MQRankSum=-1.352;QD=39.61;ReadPosRankSum=-0.115;VQSLOD=3.4705;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:96.33:0,96,1524	0/0:5,0:5:15.04:0,15,217	0/0:21,0:21:22.33:0,22,844	0/0:11,0:11:33.07:0,33,459	1/1:0,24:24:72.24:1006,72,0	0/0:24,0:24:72.25:0,72,1150	0/0:21,0:21:63.21:0,63,1005	1/1:0,24:24:72.23:989,72,0	0/0:17,0:17:51.17:0,51,815	1/1:0,30:30:90.23:1194,90,0	1/1:0,20:20:54.18:755,54,0	0/0:19,0:19:57.18:0,57,888	0/0:16,0:16:48.15:0,48,741	1/1:0,14:14:39.13:545,39,0	0/0:10,0:10:30.05:0,30,402	0/0:14,0:14:42.14:0,42,670	1/1:0,22:22:63.21:881,63,0	1/1:0,25:25:63.21:881,63,0	0/0:18,0:18:54.17:0,54,842	0/0:21,0:21:63.21:0,63,1005	0/0:14,0:14:39.13:0,39,617	0/0:10,0:10:30.10:0,30,480	0/0:20,0:20:57.17:0,57,886	0/0:11,0:11:33:0,33,495	1/1:0,14:14:39.13:546,39,0	1/1:0,30:30:90.30:1259,90,0	0/0:27,0:27:81.26:0,81,1271	1/1:0,12:12:33.11:461,33,0
chr10	48596803	.	C	CA	6852.96	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-13.014;DP=574;FS=2.867;HRun=6;HaplotypeScore=55.3593;InbreedingCoeff=0.9990;MQ=76.78;MQ0=0;MQRankSum=-1.565;QD=29.54;ReadPosRankSum=0.776;VQSLOD=5.5250;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:60.05:0,60,585	0/0:10,0:10:30.07:0,30,305	0/0:25,0:25:47.69:0,48,466	0/0:23,0:20:31.78:0,32,324	1/1:2,35:37:99:1198,102,0	0/0:30,0:30:81.08:0,81,791	0/0:15,0:15:36.07:0,36,361	1/1:6,18:24:51:535,51,0	0/0:17,0:17:51.08:0,51,510	1/1:3,25:28:74.22:856,74,0	1/1:3,28:31:84.22:1022,84,0	0/0:14,0:14:39.02:0,39,378	0/0:20,0:20:54.12:0,54,549	1/1:2,18:20:48.15:597,48,0	0/0:19,0:20:56.13:0,56,543	0/0:15,0:15:45.04:0,45,438	1/1:1,26:27:63.20:784,63,0	1/1:1,16:17:36.11:448,36,0	0/0:23,0:23:60.16:0,60,565	0/0:21,0:21:54.06:0,54,520	0/0:9,0:9:21.05:0,21,214	0/0:16,0:16:45.06:0,45,443	0/0:13,0:13:36.08:0,36,366	0/0:17,0:17:45.09:0,45,452	1/1:2,11:13:27.08:336,27,0	1/1:3,21:24:60.15:718,60,0	0/0:31,0:31:81.58:0,82,800	1/1:1,10:11:30.07:359,30,0
chr10	48598599	.	GAA	G	2185.35	PASS	AB=0.785;AC=20;AF=0.357;AN=56;BaseQRankSum=5.575;DP=443;FS=25.213;HRun=14;HaplotypeScore=55.2891;InbreedingCoeff=0.7176;MQ=55.32;MQ0=14;MQRankSum=0.558;QD=12.14;ReadPosRankSum=5.727;VQSLOD=0.3918;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,1:31:40.07:0,40,733	0/0:7,0:8:14.54:0,15,176	0/0:8,0:3:5.83:0,6,64	0/0:10,0:6:9.98:0,10,77	1/1:1,12:14:29.71:262,30,0	0/0:19,0:19:32.56:0,33,397	0/0:22,1:22:20.05:0,20,527	1/1:6,14:19:39:358,39,0	0/1:12,1:14:1.20:1,0,249	1/1:8,7:15:14.88:139,15,0	0/1:9,3:13:13.70:116,0,14	0/0:14,0:14:33.09:0,33,422	0/0:6,0:6:15.03:0,15,190	1/1:2,8:13:17.59:198,18,0	0/1:9,1:11:1.22:1,0,239	0/0:14,0:14:26.56:0,27,327	1/1:4,21:26:42.48:519,42,0	1/1:1,17:18:45.05:416,45,0	0/0:13,0:11:24.07:0,24,317	0/0:10,0:12:20.53:0,21,226	0/0:25,0:24:3.12:0,3,362	0/0:12,0:16:44.50:0,45,502	0/0:14,0:16:29.57:0,30,356	0/0:18,0:20:47.55:0,48,551	1/1:6,10:16:11.99:111,12,0	1/1:5,5:10:17.85:209,18,0	0/0:21,0:22:56.50:0,56,705	0/1:2,2:7:3.59:54,0,4
chr10	48598694	.	G	GT	1944.50	PASS	AB=0.825;AC=21;AF=0.375;AN=56;BaseQRankSum=-3.708;DP=422;FS=0.000;HRun=14;HaplotypeScore=59.7104;InbreedingCoeff=0.2181;MQ=74.22;MQ0=7;MQRankSum=0.187;QD=7.72;ReadPosRankSum=-0.351;VQSLOD=2.2453;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,1:27:28.65:0,29,169	0/0:3,0:5:7.01:0,7,31	0/0:24,0:11:8.65:0,9,57	0/0:22,0:11:2.80:0,3,15	1/1:5,9:15:4.53:146,5,0	0/1:11,0:12:0.76:1,0,113	0/0:9,0:9:11.63:0,12,77	0/1:25,6:30:21.26:201,0,21	0/1:7,0:9:17.96:36,0,18	0/1:5,6:11:39.78:61,0,40	0/1:9,9:18:0.06:109,0,0	0/1:10,1:12:28.30:28,0,75	0/0:13,0:14:25.61:0,26,159	1/1:7,6:12:26.88:221,27,0	0/0:11,0:13:23.12:0,23,144	0/0:10,0:10:20.64:0,21,132	1/1:6,17:23:62.82:538,63,0	0/1:9,10:19:3.72:205,0,4	0/0:12,0:14:12.88:0,13,69	0/1:16,0:17:1.80:2,0,96	0/0:8,0:8:11.78:0,12,77	0/0:2,0:2:2.95:0,3,19	0/1:7,3:11:33.81:34,0,62	0/1:3,1:4:14.53:15,0,44	0/1:11,3:14:3.90:73,0,4	1/1:9,13:24:35.70:282,36,0	0/0:22,0:21:38.30:0,38,250	1/1:11,5:18:12.97:169,13,0
chr10	48600775	.	AACACACACAC	A	2595.97	PASS	AB=1.000;AC=9;AF=0.167;AN=54;BaseQRankSum=2.380;DP=449;FS=4.480;HRun=0;HaplotypeScore=157.3318;InbreedingCoeff=0.7148;MQ=62.78;MQ0=2;MQRankSum=-6.090;QD=31.28;ReadPosRankSum=1.312;VQSLOD=3.2750;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:42.06:0,42,1851	0/0:4,0:5:15.05:0,15,640	0/0:20,0:14:21.07:0,21,757	0/0:18,0:16:23.75:0,24,626	0/0:32,0:32:26.30:0,26,218	0/0:9,0:21:27.09:0,27,1091	0/0:7,0:15:24.08:0,24,990	0/0:34,0:34:10.36:0,10,241	0/0:6,0:11:12.04:0,12,545	0/1:13,0:13:29.11:29,0,45	0/0:17,0:17:9.03:0,9,44	0/0:14,0:14:30.10:0,30,1434	0/0:10,0:10:22.89:0,23,909	0/0:8,0:8:7.02:0,7,45	0/0:16,0:17:32.08:0,32,1591	0/0:12,0:14:27.09:0,27,1099	0/0:20,0:20:7.30:0,7,57	0/0:15,0:15:14.71:0,15,355	1/1:3,5:9:18.06:478,18,0	1/1:10,10:22:36.12:1012,36,0	1/1:14,3:17:3.01:91,3,0	0/0:7,0:7:15.05:0,15,701	0/0:16,0:16:36.12:0,36,1769	0/0:12,0:12:24.08:0,24,1085	0/0:13,0:13:7.48:0,7,34	0/0:16,0:15:14.01:0,14,89	1/1:5,15:22:39.13:1139,39,0	./.
chr10	48600803	.	CACACA	C	2836.75	PASS	AB=0.840;AC=15;AF=0.268;AN=56;BaseQRankSum=14.000;DP=486;FS=34.092;HRun=0;HaplotypeScore=128.6935;InbreedingCoeff=-0.0369;MQ=64.31;MQ0=5;MQRankSum=-12.031;QD=11.77;ReadPosRankSum=5.832;VQSLOD=1.0568;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:50.62:0,51,1361	0/0:6,0:6:18.06:0,18,477	0/0:27,0:21:63.20:0,63,966	0/0:23,0:21:29.53:0,30,703	0/1:12,16:28:64.90:455,0,65	0/0:23,0:23:36.10:0,36,769	0/0:15,0:15:36.59:0,37,804	0/1:24,8:32:99:364,0,165	0/0:11,0:11:24.08:0,24,524	0/1:12,6:18:65.13:236,0,65	1/1:3,11:14:27.20:460,27,0	0/0:24,0:24:69.23:0,69,1527	0/0:15,0:15:43.01:0,43,921	0/1:8,5:13:70.77:164,0,71	0/0:15,0:15:41.66:0,42,1192	0/0:13,0:13:39.12:0,39,822	0/1:15,4:19:99:142,0,124	0/1:9,3:12:91.97:92,0,183	0/1:13,0:12:87.64:88,0,187	0/1:25,0:24:99:203,0,272	0/1:12,0:12:3.04:3,0,190	0/0:10,0:10:27.09:0,27,628	0/0:19,0:19:54.18:0,54,1374	0/0:15,0:15:33.11:0,33,879	1/1:3,7:10:2.91:234,3,0	0/1:12,9:20:84.27:304,0,84	0/1:24,0:23:99:254,0,196	0/0:5,0:5:11.19:0,11,51
chr10	48601887	.	C	CAAGTGGCCTTCAAAAAGTTTGTCTCT	15164.26	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=0.919;DP=445;FS=12.083;HRun=0;HaplotypeScore=265.4896;InbreedingCoeff=0.8812;MQ=65.95;MQ0=8;MQRankSum=-10.517;QD=202.19;ReadPosRankSum=-0.419;VQSLOD=3.3993;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:42:99:0,126,7600	0/0:7,0:7:21.07:0,21,1408	0/0:18,0:12:36.12:0,36,1573	0/0:14,0:11:31.92:0,32,1818	1/1:8,4:11:33.11:2959,33,0	0/0:26,0:26:72.23:0,72,4728	0/0:22,0:21:54.16:0,54,2882	1/1:13,0:11:24.06:1609,24,0	0/0:14,0:14:42.14:0,42,2569	1/1:5,2:8:21.05:1698,21,0	1/1:5,1:5:12.04:1005,12,0	0/0:15,0:15:45.15:0,45,2853	0/0:16,0:16:45.15:0,45,2674	1/1:5,1:6:12.04:1168,12,0	0/0:19,0:19:54.66:0,55,3758	0/0:18,0:18:54.19:0,54,3616	1/1:1,3:3:9.03:1113,9,0	0/1:9,0:9:99:1125,0,354	0/0:20,0:20:60.18:0,60,3353	0/0:27,0:27:75.26:0,75,4841	0/0:30,0:30:90.31:0,90,5675	0/0:21,0:21:57.20:0,57,3993	0/0:26,0:26:78.27:0,78,5471	0/0:15,0:15:42.14:0,42,2929	1/1:3,4:7:21.07:2258,21,0	1/1:3,4:7:18.06:1628,18,0	0/0:19,0:19:54.17:0,54,3635	1/1:2,0:2:6.02:601,6,0
chr10	48602374	.	CGG	C	2531.42	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=8.002;DP=447;FS=2.246;HRun=4;HaplotypeScore=83.2855;InbreedingCoeff=0.9625;MQ=78.28;MQ0=8;MQRankSum=-2.398;QD=21.64;ReadPosRankSum=1.453;VQSLOD=1.2578;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:54.09:0,54,858	0/0:5,0:5:12.04:0,12,183	0/0:46,0:35:99:0,102,1726	0/0:20,0:17:44.64:0,45,715	1/1:14,0:14:14.91:215,15,0	0/0:26,0:26:78.16:0,78,1306	0/0:17,0:17:51.14:0,51,836	1/1:26,0:26:34.83:848,35,0	0/0:15,0:15:42.53:0,43,703	1/1:2,11:12:27.02:342,27,0	1/1:11,0:11:11.25:129,11,0	0/0:14,0:14:33:0,33,427	0/0:9,0:9:21.07:0,21,324	1/1:8,1:9:18.04:231,18,0	0/0:21,0:21:63.10:0,63,1031	0/0:17,0:17:50.45:0,50,766	1/1:11,2:12:14.42:118,14,0	1/1:7,0:7:17.78:201,18,0	0/0:8,0:8:21.03:0,21,333	0/0:21,0:20:43.47:0,43,582	0/0:20,0:20:48.11:0,48,700	0/0:16,0:15:40.02:0,40,597	0/0:17,0:17:36.12:0,36,548	0/0:17,0:17:33.58:0,34,511	1/1:6,0:6:6.02:86,6,0	1/1:12,0:12:32.99:397,33,0	0/0:18,0:17:47.37:0,47,663	1/1:6,0:6:14.72:180,15,0
chr10	48602376	.	GGGACAC	G	2272.15	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=5.569;DP=451;FS=2.367;HRun=0;HaplotypeScore=115.9788;InbreedingCoeff=0.2919;MQ=76.43;MQ0=8;MQRankSum=-1.402;QD=19.42;ReadPosRankSum=1.015;VQSLOD=3.2640;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:57.15:0,57,1198	0/0:5,0:5:12.04:0,12,271	0/0:45,0:34:99:0,102,1766	0/0:19,0:16:44.64:0,45,717	0/1:14,0:14:6.42:195,0,6	0/0:27,0:27:80.76:0,81,1954	0/0:18,0:18:54.18:0,54,1281	1/1:2,24:26:6.75:886,7,0	0/0:16,0:16:46.04:0,46,1082	0/1:13,0:12:6.93:298,0,7	0/1:11,0:11:32.63:110,0,33	0/0:15,0:15:36.09:0,36,625	0/0:7,0:7:21.07:0,21,529	1/1:9,0:9:18.04:231,18,0	0/0:21,0:21:63.17:0,63,1873	0/0:17,0:17:51.09:0,51,1341	0/1:12,0:11:60.76:78,0,61	0/1:6,0:6:49.12:147,0,49	0/0:7,0:7:21.07:0,21,502	0/0:20,0:19:44.24:0,44,738	0/0:22,0:22:48.12:0,48,1055	0/0:18,0:17:44.65:0,45,883	0/0:18,0:18:38.16:0,38,1087	0/0:18,0:18:39.60:0,40,979	1/1:6,0:6:6.49:87,6,0	0/1:14,0:14:99:250,0,133	0/0:18,0:17:53.39:0,53,1135	0/1:6,0:6:26.04:154,0,26
chr10	48602378	.	G	GACAC	2766.33	PASS	AB=0.857;AC=33;AF=0.611;AN=54;BaseQRankSum=3.808;DP=525;FS=0.628;HRun=0;HaplotypeScore=138.1925;InbreedingCoeff=0.4561;MQ=70.36;MQ0=9;MQRankSum=-2.522;QD=8.18;ReadPosRankSum=-1.819;VQSLOD=2.4892;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:26:3.99:0,4,158	0/1:4,0:5:6.48:6,0,19	0/1:43,0:31:0:0,0,0	./.	1/1:16,0:16:5.77:25,6,0	0/0:27,0:28:36.04:0,36,434	0/0:17,0:18:24.05:0,24,332	0/0:27,0:26:5.69:0,6,43	0/0:18,0:20:10.62:0,11,316	1/1:19,0:18:18.06:304,18,0	1/1:12,0:12:3.01:55,3,0	1/1:8,5:15:6.12:189,6,0	1/1:4,3:13:8.68:154,9,0	1/1:20,0:20:6.02:68,6,0	0/0:18,0:20:48.13:0,48,690	0/0:17,0:17:33.10:0,33,477	1/1:13,0:12:6.02:102,6,0	1/1:10,0:10:9.03:134,9,0	0/1:11,0:11:6.77:19,0,7	1/1:17,0:22:5.99:49,6,0	0/1:13,0:25:13.84:128,0,14	1/1:14,6:22:12.04:284,12,0	1/1:8,11:23:1.75:365,2,0	1/1:8,10:22:26.41:508,26,0	0/0:12,0:12:1.55:0,2,4	1/1:18,0:18:24.14:330,24,0	0/1:15,0:19:7.87:165,0,8	1/1:6,0:6:3.01:52,3,0
chr10	48602416	.	C	CACACACACAT	2991.22	PASS	AB=0.815;AC=19;AF=0.339;AN=56;BaseQRankSum=1.111;DP=549;FS=15.887;HRun=0;HaplotypeScore=184.7612;InbreedingCoeff=0.5778;MQ=61.32;MQ0=9;MQRankSum=-3.255;QD=12.95;ReadPosRankSum=-2.874;VQSLOD=0.9476;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:41.98:0,42,560	0/0:4,0:4:11.99:0,12,115	0/0:19,0:10:11.55:0,12,255	0/0:16,0:14:32.63:0,33,288	0/1:3,24:36:0:0,0,0	0/0:27,0:27:66.03:0,66,1067	0/0:17,0:17:51.05:0,51,858	0/0:25,0:24:50.54:0,51,524	0/0:16,0:16:42.05:0,42,782	1/1:25,0:24:62.34:938,62,0	1/1:4,0:24:3.01:78,3,0	0/1:12,0:12:15.36:15,0,128	0/0:20,0:20:34.86:0,35,269	1/1:20,0:20:23.56:194,24,0	0/0:23,0:23:63.12:0,63,1622	0/0:22,0:22:57.08:0,57,1113	0/1:3,9:15:6.84:400,0,7	1/1:9,0:11:26.79:319,27,0	0/1:15,0:15:29.20:29,0,213	0/0:19,0:19:35.83:0,36,277	0/0:23,0:23:19.57:0,20,319	0/0:23,0:23:33.62:0,34,250	0/0:26,0:26:3.14:0,3,250	0/1:21,0:21:32.26:32,0,187	1/1:17,0:17:17.96:148,18,0	1/1:10,0:26:58.37:897,58,0	0/0:18,0:17:23.74:0,24,360	1/1:1,0:8:3.01:127,3,0
chr10	48603016	.	G	GA	8053.16	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=14.774;DP=571;FS=30.115;HRun=6;HaplotypeScore=85.5630;InbreedingCoeff=0.9795;MQ=71.26;MQ0=0;MQRankSum=-4.292;QD=33.28;ReadPosRankSum=0.955;VQSLOD=2.8054;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:37.36:0,37,559	0/0:12,0:12:33.07:0,33,336	0/0:11,0:11:24.05:0,24,244	0/0:7,0:7:6.06:0,6,141	1/1:1,25:26:72.19:888,72,0	0/0:22,0:22:57.12:0,57,581	0/0:18,0:18:45.08:0,45,452	1/1:6,32:38:96.31:1203,96,0	0/0:22,0:22:63.14:0,63,643	1/1:0,20:21:63.16:767,63,0	1/1:2,31:33:87.23:1071,87,0	0/0:4,0:4:12.03:0,12,122	0/0:19,0:19:57.11:0,57,574	1/1:1,21:22:57.18:715,57,0	0/0:21,0:21:54.09:0,54,538	0/0:20,0:20:57.13:0,57,581	1/1:1,23:24:63.20:792,63,0	1/1:0,12:13:26.20:350,26,0	0/0:16,0:16:42.09:0,42,429	0/0:32,0:32:93.21:0,93,949	0/0:16,0:16:45.10:0,45,459	0/0:14,0:14:39.09:0,39,398	0/0:28,0:28:81.17:0,81,820	0/0:13,0:13:39.09:0,39,398	1/1:1,20:21:57.18:717,57,0	1/1:2,17:19:51.16:641,51,0	0/0:34,0:34:87.19:0,87,887	1/1:0,25:25:73.48:908,73,0
chr10	48603196	.	AACAC	A	9796.35	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=15.069;DP=535;FS=11.510;HRun=0;HaplotypeScore=92.9923;InbreedingCoeff=0.9935;MQ=78.09;MQ0=1;MQRankSum=-7.562;QD=46.21;ReadPosRankSum=0.770;VQSLOD=5.2055;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:42.14:0,42,1108	0/0:6,0:6:15.05:0,15,387	0/0:20,0:20:60.21:0,60,1481	0/0:20,0:20:57.19:0,57,1322	1/1:5,19:24:54.19:988,54,0	0/0:24,0:24:72.23:0,72,1815	0/0:11,0:11:24.08:0,24,574	1/1:4,34:38:96.30:1658,96,0	0/0:19,0:19:57.20:0,57,1490	1/1:0,35:35:99:1829,105,0	1/1:0,28:28:81.23:1455,81,0	0/0:9,0:9:24.08:0,24,634	0/0:17,0:17:48.15:0,48,1204	1/1:2,18:20:48.12:843,48,0	0/0:15,0:15:39.13:0,39,1018	0/0:23,0:23:66.23:0,66,1731	1/1:2,14:15:33.07:572,33,0	1/1:1,7:8:21.07:386,21,0	0/0:12,0:12:33.11:0,33,852	0/0:20,0:20:51.17:0,51,1302	0/0:13,0:13:39.13:0,39,1030	0/0:14,0:14:39.13:0,39,997	0/0:31,0:31:87.30:0,87,2240	0/0:8,0:8:24.08:0,24,634	1/1:1,7:8:15.05:276,15,0	1/1:1,25:26:72.24:1294,72,0	0/0:46,0:45:99:0,123,3234	1/1:0,9:9:27.09:496,27,0
chr10	48603484	.	A	ATT	6593.63	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=4.933;DP=433;FS=0.000;HRun=9;HaplotypeScore=57.6762;InbreedingCoeff=0.9472;MQ=67.94;MQ0=0;MQRankSum=-1.549;QD=37.68;ReadPosRankSum=-1.496;VQSLOD=4.5102;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:72.15:0,72,764	0/0:7,0:7:21.05:0,21,224	0/0:5,0:5:2.98:0,3,31	0/0:9,0:8:11.91:0,12,98	1/1:2,27:30:84.20:1227,84,0	0/0:14,0:14:42.11:0,42,447	0/0:10,0:10:30.08:0,30,319	1/1:8,21:32:69.19:983,69,0	0/0:12,0:13:30.02:0,30,367	1/1:2,12:16:38.61:545,39,0	1/1:1,18:19:57.15:847,57,0	0/0:12,0:12:30.06:0,30,319	0/0:12,0:12:33.06:0,33,343	1/1:1,6:8:18.06:277,18,0	0/0:6,0:6:15.02:0,15,160	0/0:15,0:16:44.85:0,45,459	1/1:2,17:20:54.18:815,54,0	1/1:4,14:19:19.63:614,20,0	0/0:15,0:15:33.01:0,33,332	0/0:26,0:27:71.88:0,72,739	0/0:10,0:10:18.04:0,18,192	0/0:9,0:9:27.07:0,27,287	0/0:21,0:21:57.12:0,57,606	0/0:13,0:13:33.08:0,33,351	1/1:2,14:16:42.14:639,42,0	1/1:1,12:13:36.12:554,36,0	0/0:31,0:31:78.18:0,78,830	1/1:0,2:2:6.02:92,6,0
chr10	48603673	.	GA	G	4382.06	PASS	AB=0.900;AC=22;AF=0.393;AN=56;BaseQRankSum=16.252;DP=543;FS=5.403;HRun=11;HaplotypeScore=82.2540;InbreedingCoeff=0.8197;MQ=65.58;MQ0=0;MQRankSum=-0.952;QD=16.98;ReadPosRankSum=0.479;VQSLOD=5.6427;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,1:19:29.49:0,29,515	0/0:6,0:6:18.05:0,18,192	0/0:13,1:9:3.48:0,3,33	0/1:13,1:10:16.02:16,0,26	1/1:5,28:35:84.96:675,85,0	0/0:20,2:22:16.84:0,17,574	0/0:14,0:15:41.94:0,42,429	1/1:6,34:40:92.86:760,93,0	0/0:16,0:16:48.11:0,48,505	1/1:1,24:25:68.87:559,69,0	1/1:8,19:27:31.77:438,32,0	0/0:13,0:13:36.09:0,36,383	0/1:11,2:13:10.19:10,0,313	1/1:2,13:15:29.96:246,30,0	0/0:12,0:12:36.08:0,36,377	0/0:30,0:30:87.20:0,87,920	1/1:4,23:27:62.92:517,63,0	1/1:1,7:8:14.96:123,15,0	0/0:26,0:26:56.62:0,57,575	0/0:19,2:21:7.69:0,8,477	0/0:6,0:7:20.89:0,21,206	0/0:19,0:20:50.96:0,51,526	0/0:25,1:26:37.54:0,38,622	0/0:11,0:11:33.08:0,33,352	1/1:2,23:26:64.95:523,65,0	1/1:1,12:13:35.93:293,36,0	0/0:26,1:27:53.54:0,54,767	1/1:3,12:15:26.93:222,27,0
chr10	48604573	.	T	TAA	10441.18	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=18.475;DP=629;FS=2.243;HRun=0;HaplotypeScore=112.6453;InbreedingCoeff=0.9999;MQ=76.76;MQ0=0;MQRankSum=-9.008;QD=51.43;ReadPosRankSum=0.610;VQSLOD=5.3651;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:45.15:0,45,734	0/0:18,0:18:54.18:0,54,881	0/0:21,0:21:60.16:0,60,886	0/0:13,0:13:35.39:0,35,539	1/1:0,29:30:84.29:1481,84,0	0/0:24,0:24:69.24:0,69,1116	0/0:14,0:14:42.14:0,42,685	1/1:0,26:29:84.25:1472,84,0	0/0:21,0:21:63.22:0,63,1025	1/1:1,13:14:41.97:740,42,0	1/1:1,17:20:51.13:911,51,0	0/0:20,0:20:57.19:0,57,923	0/0:28,0:28:84.29:0,84,1355	1/1:0,18:18:54.19:1000,54,0	0/0:36,0:36:99:0,105,1705	0/0:20,0:20:57.19:0,57,928	1/1:1,15:16:45.53:798,46,0	1/1:2,13:15:39.13:724,39,0	0/0:25,0:25:75.24:0,75,1182	0/0:34,0:34:99:0,99,1607	0/0:15,0:15:45.15:0,45,734	0/0:37,0:37:99:0,111,1808	0/0:28,0:28:81.26:0,81,1295	0/0:13,0:13:39.13:0,39,632	1/1:0,24:24:72.25:1348,72,0	1/1:0,23:23:69.23:1240,69,0	0/0:44,0:44:99:0,132,2084	1/1:0,14:14:39.13:727,39,0
chr10	48604865	.	AACTGAT	A	11795.84	PASS	AB=0.667;AC=19;AF=0.339;AN=56;BaseQRankSum=17.255;DP=668;FS=3.263;HRun=0;HaplotypeScore=165.9011;InbreedingCoeff=0.9052;MQ=80.77;MQ0=0;MQRankSum=-16.910;QD=56.17;ReadPosRankSum=-1.342;VQSLOD=4.4995;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:75.26:0,75,2549	0/0:15,0:15:45.13:0,45,1536	0/0:26,0:26:75.26:0,75,2341	0/0:15,0:15:45.14:0,45,1421	1/1:1,24:25:45.15:1074,45,0	0/0:38,0:38:99:0,114,4079	0/0:11,0:11:33.11:0,33,1135	1/1:1,31:32:93.26:1875,93,0	0/0:27,0:27:74.28:0,74,2491	1/1:2,22:24:66.23:1573,66,0	1/1:1,12:13:33.11:792,33,0	0/0:31,0:31:90.30:0,90,3083	0/0:25,0:25:72.25:0,72,2536	1/1:0,25:26:72.25:1729,72,0	0/0:50,0:50:99:0,151,5270	0/0:26,0:26:78.26:0,78,2708	1/1:0,18:18:39.13:937,39,0	0/1:5,5:10:17.63:273,0,18	0/0:13,0:13:39.13:0,39,1353	0/0:23,0:23:66.23:0,66,2323	0/0:21,0:21:57.18:0,57,1851	0/0:18,0:18:54.16:0,54,1848	0/0:28,0:28:84.29:0,84,2996	0/0:25,0:25:75.26:0,75,2691	1/1:0,29:29:60.21:1441,60,0	1/1:3,28:31:84.29:1958,84,0	0/0:40,0:40:99:0,117,3926	1/1:0,2:2:6.02:144,6,0
chr10	48605400	.	ATG	A	2660.74	PASS	AB=0.583;AC=19;AF=0.339;AN=56;BaseQRankSum=6.729;DP=560;FS=20.336;HRun=0;HaplotypeScore=117.8887;InbreedingCoeff=0.8271;MQ=72.10;MQ0=9;MQRankSum=-2.379;QD=13.51;ReadPosRankSum=0.446;VQSLOD=2.1780;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:30.04:0,30,427	0/0:6,0:6:15.05:0,15,241	0/0:28,0:22:44.82:0,45,567	0/0:34,0:24:3.78:0,4,197	1/1:11,11:22:12.04:146,12,0	0/0:26,0:26:60.19:0,60,936	0/0:12,0:12:26.80:0,27,389	1/1:19,26:45:75.15:836,75,0	0/0:22,1:23:26.51:0,27,877	1/1:10,11:21:32.54:431,33,0	1/1:3,8:11:15.03:169,15,0	0/0:15,0:15:36.11:0,36,552	0/0:12,0:12:33.10:0,33,507	1/1:7,7:13:6.02:72,6,0	0/0:21,0:20:39.11:0,39,580	0/0:28,0:28:66.18:0,66,985	0/1:4,10:14:13.31:160,0,13	1/1:7,2:8:6.36:87,6,0	0/0:19,0:19:30.09:0,30,460	0/0:20,1:20:39.09:0,39,553	0/0:29,2:32:8.51:0,9,527	0/0:13,0:13:27.09:0,27,434	0/0:13,0:13:29.81:0,30,430	0/0:18,0:18:39.13:0,39,627	1/1:5,9:14:5.14:71,5,0	1/1:11,22:34:56.61:708,57,0	0/0:21,0:21:33.08:0,33,505	1/1:6,6:9:15.05:181,15,0
chr10	48605427	.	GATATAT	G	1847.85	PASS	AB=0.917;AC=18;AF=0.321;AN=56;BaseQRankSum=7.823;DP=496;FS=0.000;HRun=0;HaplotypeScore=156.0815;InbreedingCoeff=0.7263;MQ=63.60;MQ0=8;MQRankSum=-7.021;QD=10.10;ReadPosRankSum=-0.726;VQSLOD=1.9473;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:17:27.07:0,27,788	0/0:5,0:5:15.05:0,15,479	0/1:18,0:13:4.08:4,0,71	0/0:23,0:12:10.51:0,11,137	1/1:15,4:25:6.02:106,6,0	0/0:22,0:25:60.20:0,60,1737	0/0:10,0:10:21.53:0,22,500	1/1:26,5:25:22.93:373,23,0	0/0:23,0:22:51.18:0,51,1673	1/1:9,4:17:31.59:555,32,0	1/1:15,2:16:3.01:37,3,0	0/0:11,0:12:33.11:0,33,980	0/0:8,0:9:24.06:0,24,645	1/1:9,2:10:4.55:28,5,0	0/0:13,0:13:27.08:0,27,771	0/0:18,0:20:45.15:0,45,1389	1/1:9,1:12:4.49:167,4,0	0/1:4,0:5:7.71:49,0,8	0/0:22,0:21:48.16:0,48,1349	0/0:24,0:23:60.21:0,60,1734	0/0:28,0:28:45.15:0,45,1230	0/0:10,0:10:21.06:0,21,582	0/0:13,0:14:36.12:0,36,1157	0/0:12,0:13:33.10:0,33,920	0/0:11,7:21:0:0,0,0	1/1:25,4:32:55.95:640,56,0	0/0:21,0:21:39.12:0,39,1048	1/1:10,1:8:5.95:71,6,0
chr10	48605442	.	A	ATG	717.63	PASS	AB=0.975;AC=21;AF=0.375;AN=56;BaseQRankSum=7.295;DP=464;FS=6.306;HRun=0;HaplotypeScore=124.8393;InbreedingCoeff=0.4663;MQ=57.47;MQ0=5;MQRankSum=-4.977;QD=2.98;ReadPosRankSum=-0.583;VQSLOD=1.5094;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:21:28.10:0,28,372	0/0:6,0:6:18.05:0,18,247	0/1:5,0:3:1.79:2,0,14	0/1:23,0:9:8.55:9,0,56	0/0:24,0:24:1.04:0,1,3	0/0:27,0:27:75.02:0,75,928	0/0:10,0:10:21.92:0,22,260	0/0:27,0:16:18.72:0,19,110	0/0:21,0:20:60.15:0,60,828	1/1:14,0:14:7.83:79,8,0	1/1:16,0:14:2.99:24,3,0	0/0:12,0:12:36.02:0,36,455	0/0:10,0:10:29.98:0,30,347	0/1:8,0:8:0:0,0,0	0/0:12,0:11:27.04:0,27,341	0/0:19,0:19:50.99:0,51,645	1/1:11,0:11:5.38:26,5,0	0/1:7,0:6:4.34:4,0,5	0/1:22,1:22:99:102,0,230	0/1:26,2:28:99:232,0,138	0/1:25,2:27:78.08:78,0,192	0/0:7,0:7:21.04:0,21,278	0/0:15,0:15:45.04:0,45,594	0/0:11,0:11:30.03:0,30,425	1/1:24,0:23:11.83:93,12,0	1/1:30,0:28:12.93:184,13,0	1/1:19,0:19:10.63:25,11,0	1/1:5,0:5:5.87:35,6,0
chr10	48605444	.	A	ATGTG	5003.74	PASS	AB=0.990;AC=26;AF=0.481;AN=54;BaseQRankSum=1.253;DP=498;FS=0.498;HRun=0;HaplotypeScore=141.1661;InbreedingCoeff=0.6567;MQ=54.89;MQ0=6;MQRankSum=-5.447;QD=16.25;ReadPosRankSum=-1.956;VQSLOD=4.3431;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:23:26.58:27,0,374	0/0:7,0:7:12.04:0,12,198	1/1:7,0:4:2.88:15,3,0	0/0:20,0:7:3.01:0,3,43	./.	0/0:28,0:28:54.05:0,54,816	0/0:10,0:10:9.03:0,9,145	0/1:41,0:23:13.61:273,0,14	0/0:21,0:20:54.18:0,54,884	1/1:22,0:22:41.70:470,42,0	1/1:17,0:15:3.01:48,3,0	0/0:12,0:12:24.07:0,24,359	0/0:9,0:9:27.09:0,27,426	1/1:10,0:10:0.95:3,1,0	0/0:11,0:10:21.05:0,21,318	0/0:17,0:17:45.11:0,45,674	1/1:12,0:12:8.24:73,8,0	0/1:7,0:7:1.39:23,0,1	1/1:8,15:22:44.95:874,45,0	1/1:22,7:29:69.19:1254,69,0	1/1:9,18:27:26.82:527,27,0	0/0:7,0:7:21.07:0,21,345	0/0:15,0:15:45.15:0,45,726	0/0:12,0:12:24.08:0,24,389	1/1:28,0:27:11.05:190,11,0	1/1:33,0:31:52.65:411,53,0	1/1:2,18:22:33.11:818,33,0	0/1:5,0:5:0:0,0,0
chr10	48605540	.	A	ATG	5779.20	PASS	AB=1.000;AC=21;AF=0.389;AN=54;BaseQRankSum=2.047;DP=471;FS=0.000;HRun=0;HaplotypeScore=90.2019;InbreedingCoeff=0.9146;MQ=55.99;MQ0=5;MQRankSum=-2.461;QD=26.27;ReadPosRankSum=0.160;VQSLOD=5.5219;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:33:72.06:0,72,849	0/0:2,0:2:2.99:0,3,24	0/1:9,0:3:0:0,0,0	./.	1/1:27,2:29:75.18:933,75,0	0/0:25,0:25:63.15:0,63,787	0/0:14,0:14:29.97:0,30,306	1/1:29,5:30:22.07:691,22,0	0/0:10,0:10:21.07:0,21,267	1/1:21,2:23:59.99:797,60,0	1/1:20,4:24:60.19:825,60,0	0/0:15,0:15:42.12:0,42,521	0/0:10,0:10:27.09:0,27,343	1/1:6,2:8:14.94:200,15,0	0/0:15,0:15:39.11:0,39,483	0/0:16,0:16:42.10:0,42,517	1/1:23,0:23:36.28:417,36,0	1/1:12,1:13:32.92:341,33,0	0/0:14,0:12:33.10:0,33,408	0/0:35,0:35:89.79:0,90,1072	0/0:9,0:8:18.04:0,18,215	0/0:2,0:2:3.01:0,3,38	0/0:9,0:9:27.03:0,27,290	0/0:7,0:7:18.04:0,18,214	1/1:26,0:26:59.67:671,60,0	1/1:20,3:23:50.91:646,51,0	0/0:31,0:31:72.17:0,72,857	1/1:7,1:8:18.03:259,18,0
chr10	48605695	.	G	GCCAAATT	3912.38	PASS	AB=0.729;AC=13;AF=0.241;AN=54;BaseQRankSum=8.103;DP=417;FS=0.000;HRun=0;HaplotypeScore=116.7451;InbreedingCoeff=0.4987;MQ=79.20;MQ0=0;MQRankSum=-7.890;QD=66.31;ReadPosRankSum=0.610;VQSLOD=3.8332;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,102,2754	0/0:9,0:9:27.09:0,27,755	0/0:19,0:19:50.91:0,51,1309	0/0:16,0:15:36.12:0,36,985	0/1:4,2:6:23.60:248,0,24	0/0:18,0:18:54.15:0,54,1334	0/0:19,0:19:57.18:0,57,1533	0/1:5,0:5:43.29:104,0,43	0/0:18,0:18:51.16:0,51,1306	1/1:2,6:8:21.07:700,21,0	0/1:5,5:10:4.04:531,0,4	0/0:27,0:27:78.25:0,78,2015	0/0:22,0:22:63.19:0,63,1623	0/1:3,5:8:19.46:523,0,19	0/0:23,0:23:69.24:0,69,1901	0/0:27,0:27:78.26:0,78,2123	1/1:1,2:3:6.02:213,6,0	1/1:0,2:2:6.02:216,6,0	0/0:13,0:13:36.12:0,36,1002	0/0:18,0:18:51.16:0,51,1325	0/0:31,0:31:90.31:0,90,2500	0/0:8,0:8:24.08:0,24,671	0/0:10,0:10:30.10:0,30,812	0/0:17,0:17:51.18:0,51,1406	0/1:3,5:8:7.24:635,0,7	1/1:4,5:9:24.08:742,24,0	0/0:28,0:28:84.29:0,84,2349	./.
chr10	48605696	.	G	GAGACCCTACC	9481.73	PASS	AB=0.753;AC=16;AF=0.296;AN=54;BaseQRankSum=10.274;DP=453;FS=16.008;HRun=0;HaplotypeScore=160.6717;InbreedingCoeff=0.8152;MQ=76.39;MQ0=0;MQRankSum=-12.091;QD=98.77;ReadPosRankSum=-0.788;VQSLOD=4.1362;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,105,3445	0/0:9,0:9:27.09:0,27,944	0/0:19,0:19:54.08:0,54,1583	0/0:16,0:15:39.13:0,39,1194	0/1:7,2:9:27.87:462,0,28	0/0:17,0:17:51.18:0,51,1583	0/0:19,0:19:57.20:0,57,1937	1/1:24,0:24:52.85:2588,53,0	0/0:18,0:18:51.17:0,51,1586	1/1:3,6:9:24.05:1045,24,0	0/1:6,4:11:6.10:971,0,6	0/0:26,0:26:72.25:0,72,2353	0/0:20,0:20:60.21:0,60,2003	1/1:7,5:12:33.05:1425,33,0	0/0:23,0:23:69.24:0,69,2338	0/0:27,0:27:75.26:0,75,2621	1/1:4,2:6:12.04:519,12,0	1/1:0,2:2:6.02:293,6,0	0/0:14,0:14:39.13:0,39,1250	0/0:17,0:17:51.14:0,51,1581	0/0:31,0:31:93.30:0,93,3127	0/0:8,0:8:24.08:0,24,836	0/0:11,0:11:30.10:0,30,1044	0/0:18,0:18:51.18:0,51,1740	1/1:4,5:9:23.83:973,24,0	1/1:9,5:14:32.61:1205,33,0	0/0:29,0:29:84.29:0,84,2936	./.
chr10	48605928	.	ATT	A	1071.02	PASS	AB=0.642;AC=18;AF=0.321;AN=56;BaseQRankSum=-1.575;DP=436;FS=24.775;HRun=17;HaplotypeScore=62.5495;InbreedingCoeff=0.6904;MQ=73.78;MQ0=11;MQRankSum=2.004;QD=7.54;ReadPosRankSum=3.988;VQSLOD=-0.5417;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,2:27:8.35:0,8,492	0/0:3,0:5:11.40:0,11,122	0/0:36,0:19:16.71:0,17,120	0/0:15,0:6:8.59:0,9,61	0/0:8,0:18:29.19:0,29,257	0/0:12,0:17:31.16:0,31,305	0/0:10,0:12:16.24:0,16,174	0/1:13,4:25:26.30:52,0,26	0/0:14,0:16:29.38:0,29,313	0/0:8,0:22:50.87:0,51,481	0/0:11,0:19:25.21:0,25,200	1/1:4,6:12:11.43:122,11,0	1/1:4,4:8:2.87:63,3,0	0/0:4,0:6:6.01:0,6,57	0/0:11,1:13:2.10:0,2,220	0/0:8,0:9:15.05:0,15,190	0/0:17,0:20:38.94:0,39,364	0/0:12,0:15:17.77:0,18,170	0/1:5,7:14:32.78:76,0,33	1/1:9,7:18:25.14:171,25,0	1/1:3,8:15:23.26:205,23,0	1/1:3,3:7:4.61:81,5,0	1/1:2,9:13:14.48:146,14,0	1/1:2,9:10:20.93:166,21,0	0/0:8,0:15:27.02:0,27,274	0/0:5,0:13:30.03:0,30,297	1/1:11,8:18:19.84:183,20,0	0/0:6,0:8:9.49:0,9,96
chr10	48606064	.	CAA	C	1279.13	PASS	AB=0.700;AC=18;AF=0.321;AN=56;BaseQRankSum=2.897;DP=384;FS=13.362;HRun=17;HaplotypeScore=71.9762;InbreedingCoeff=0.7437;MQ=72.49;MQ0=0;MQRankSum=-4.066;QD=10.48;ReadPosRankSum=3.761;VQSLOD=1.1376;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:27:56.26:0,56,546	0/0:10,0:11:22.77:0,23,225	0/0:38,0:18:11.03:0,11,104	0/0:36,0:16:10.98:0,11,46	0/1:8,5:13:4.65:138,0,5	0/0:14,0:16:36.77:0,37,356	0/0:9,0:9:20.90:0,21,200	0/1:10,6:19:5.96:126,0,6	0/0:4,0:4:11.39:0,11,109	1/1:4,7:13:32.33:235,32,0	1/1:6,5:13:19.33:191,19,0	0/0:10,0:10:17.82:0,18,154	0/0:9,0:11:19.76:0,20,175	1/1:4,0:4:2.59:11,3,0	0/0:11,0:10:26.63:0,27,243	0/0:12,0:12:22.43:0,22,221	1/1:16,5:21:31.46:249,31,0	1/1:9,1:10:19.24:129,19,0	0/0:20,0:20:22.89:0,23,206	0/0:16,0:16:21.31:0,21,139	0/0:7,0:7:2.97:0,3,20	0/0:6,0:6:14.88:0,15,134	0/0:8,0:8:9.60:0,10,74	0/0:3,0:2:3.01:0,3,36	1/1:9,1:11:18.70:109,19,0	1/1:4,9:13:29.90:237,30,0	0/0:16,0:16:19.58:0,20,176	1/1:4,1:5:5.93:47,6,0
chr10	48606090	.	G	GA	2770.63	PASS	AB=1.000;AC=19;AF=0.352;AN=54;BaseQRankSum=7.189;DP=395;FS=5.424;HRun=6;HaplotypeScore=66.0870;InbreedingCoeff=0.8449;MQ=68.39;MQ0=1;MQRankSum=-4.894;QD=19.38;ReadPosRankSum=0.869;VQSLOD=3.1763;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:62.89:0,63,642	0/0:8,0:8:18.03:0,18,178	0/1:25,0:11:7.63:8,0,109	0/0:23,1:11:9.59:0,10,119	1/1:4,10:14:33.06:383,33,0	0/0:14,0:14:38.98:0,39,375	0/0:10,0:10:18.02:0,18,179	0/0:33,0:33:68.87:0,69,675	0/0:5,0:5:9.01:0,9,92	1/1:2,14:16:42.13:528,42,0	1/1:3,12:15:30.03:357,30,0	0/0:10,0:10:24:0,24,227	0/0:11,0:11:21.02:0,21,214	1/1:1,2:3:3.01:38,3,0	0/0:15,0:14:30:0,30,297	0/0:12,0:12:27.03:0,27,265	1/1:8,19:27:49.40:607,49,0	1/1:7,1:8:14.99:144,15,0	0/0:20,0:20:51.12:0,51,520	0/0:15,0:15:27.05:0,27,274	0/0:11,0:11:24.05:0,24,244	0/0:2,0:2:6.01:0,6,61	0/0:8,0:8:18.04:0,18,183	./.	1/1:2,10:12:26.95:317,27,0	1/1:6,15:21:42.13:528,42,0	0/0:20,0:20:33.05:0,33,329	1/1:1,1:2:6.01:63,6,0
chr10	48606350	.	A	AGCT	516.63	PASS	AC=2;AF=0.038;AN=52;BaseQRankSum=-1.986;DP=434;FS=20.632;HRun=0;HaplotypeScore=74.6044;InbreedingCoeff=0.5962;MQ=68.58;MQ0=0;MQRankSum=-2.636;QD=17.22;ReadPosRankSum=-3.384;VQSLOD=0.7734;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:18.06:0,18,250	0/0:6,0:6:12.03:0,12,150	0/0:25,0:21:24.08:0,24,327	0/0:15,0:15:21.04:0,21,263	0/0:16,0:16:6.02:0,6,84	0/0:20,0:20:27.09:0,27,376	0/0:16,0:16:15.05:0,15,209	1/1:19,10:30:33.10:610,33,0	0/0:20,0:20:42.14:0,42,585	0/0:11,0:11:12.04:0,12,167	./.	0/0:12,0:12:21.07:0,21,293	0/0:24,0:24:54.18:0,54,752	0/0:12,0:12:30.10:0,30,417	0/0:15,0:15:42.14:0,42,585	0/0:13,0:13:24.08:0,24,333	0/0:31,0:31:69.23:0,69,962	0/0:10,0:10:18.06:0,18,251	0/0:6,0:6:9.03:0,9,125	0/0:7,0:7:6.02:0,6,84	0/0:20,0:20:30.10:0,30,417	0/0:11,0:11:9.03:0,9,125	./.	0/0:7,0:7:15.05:0,15,209	0/0:14,0:15:9.50:0,10,127	0/0:18,0:18:12.04:0,12,167	0/0:24,0:24:51.17:0,51,711	0/0:7,0:7:6.02:0,6,79
chr10	48607184	.	GA	G	1911.45	PASS	AC=40;AF=0.833;AN=48;BaseQRankSum=1.044;DP=207;FS=74.821;HRun=2;HaplotypeScore=53.7509;InbreedingCoeff=0.4200;MQ=54.84;MQ0=12;MQRankSum=-2.400;QD=13.46;ReadPosRankSum=-0.911;VQSLOD=-0.0607;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,5:10:13.26:80,13,0	1/1:0,1:1:3.01:38,3,0	0/0:18,1:4:12.04:0,12,149	0/0:33,0:11:14.02:0,14,276	./.	1/1:7,0:7:8.53:72,9,0	1/1:7,7:13:21.01:228,21,0	1/1:12,10:21:50.03:559,50,0	1/1:6,0:5:2.97:37,3,0	1/1:1,1:2:3.01:38,3,0	1/1:4,2:6:2.57:38,3,0	1/1:6,1:5:5.81:71,6,0	1/1:5,1:5:6:62,6,0	0/0:3,1:3:0:0,0,0	1/1:6,3:7:8.54:59,9,0	1/1:8,3:11:14.99:139,15,0	1/1:6,2:7:15.04:172,15,0	1/1:1,3:4:3.01:38,3,0	1/1:4,1:5:9.01:92,9,0	1/1:2,1:3:3.01:38,3,0	./.	./.	./.	0/0:4,2:6:0.47:0,0,1	1/1:4,3:7:2.42:37,2,0	1/1:1,3:4:11.60:99,12,0	1/1:4,2:5:11.61:101,12,0	1/1:4,0:4:3:29,3,0
chr10	48607185	.	A	AC	3233.06	PASS	AC=40;AF=0.833;AN=48;BaseQRankSum=0.696;DP=263;FS=78.390;HRun=0;HaplotypeScore=84.6342;InbreedingCoeff=0.4916;MQ=49.87;MQ0=12;MQRankSum=-2.058;QD=17.29;ReadPosRankSum=-1.240;VQSLOD=0.2007;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,3:12:16.35:195,16,0	1/1:4,0:4:3.48:39,3,0	0/0:20,0:4:12.03:0,12,138	0/0:35,0:11:18.89:0,19,255	./.	1/1:8,4:12:18.14:159,18,0	1/1:10,4:13:21.06:294,21,0	1/1:21,5:25:62.35:781,62,0	1/1:5,5:9:2.99:47,3,0	1/1:3,0:2:6.01:64,6,0	1/1:2,4:6:2.74:38,3,0	1/1:7,5:10:2.64:110,3,0	1/1:3,4:6:8.99:104,9,0	0/0:3,2:4:0:0,0,0	1/1:10,5:13:14.91:186,15,0	1/1:4,6:10:15.05:205,15,0	1/1:3,4:6:15.05:212,15,0	1/1:5,1:6:9.01:94,9,0	1/1:5,2:6:15.03:187,15,0	1/1:2,2:4:3.01:38,3,0	./.	./.	./.	0/0:4,4:8:0.47:0,0,1	1/1:6,3:9:2.77:38,3,0	1/1:8,1:9:24.03:298,24,0	1/1:6,4:9:16.85:214,17,0	1/1:0,4:4:3.01:47,3,0
chr10	48607193	.	C	CA	2533.18	PASS	AB=0.605;AC=38;AF=0.826;AN=46;BaseQRankSum=-0.353;DP=280;FS=58.222;HRun=1;HaplotypeScore=74.2307;InbreedingCoeff=0.5033;MQ=43.66;MQ0=16;MQRankSum=-1.741;QD=13.47;ReadPosRankSum=-0.050;VQSLOD=-0.0848;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,4:10:5.19:19,5,0	1/1:0,4:4:0.47:1,0,0	0/0:30,0:5:15.03:0,15,158	0/0:47,0:9:15.01:0,15,154	./.	1/1:0,8:8:0.47:1,0,0	0/1:8,4:12:6.18:176,0,6	1/1:8,9:16:41.72:542,42,0	1/1:2,10:11:3.01:47,3,0	1/1:1,2:2:6.02:86,6,0	0/1:1,4:5:0:0,0,0	1/1:6,11:15:9.97:127,10,0	1/1:5,4:8:17.96:202,18,0	./.	1/1:5,9:15:6.02:95,6,0	1/1:5,6:11:16.86:196,17,0	1/1:7,1:7:15.52:216,16,0	1/1:3,2:6:9.01:120,9,0	1/1:3,5:6:14.79:201,15,0	./.	./.	./.	1/1:1,0:1:0.89:2,1,0	0/1:2,6:8:0:0,0,0	0/1:2,4:8:0:0,0,0	1/1:4,8:12:32.28:409,32,0	1/1:1,8:9:16.05:153,16,0	1/1:1,1:2:5.69:58,6,0
chr10	48610454	.	AG	A	11618.17	PASS	AC=52;AF=0.963;AN=54;BaseQRankSum=-2.100;DP=384;FS=0.000;HRun=2;HaplotypeScore=101.1448;InbreedingCoeff=0.6898;MQ=44.96;MQ0=1;MQRankSum=-2.441;QD=31.23;ReadPosRankSum=2.011;VQSLOD=4.5166;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,24:24:54.18:698,54,0	1/1:0,9:8:24.08:311,24,0	0/0:7,1:2:6.02:0,6,89	./.	1/1:0,14:14:24.08:311,24,0	1/1:0,21:20:54.18:700,54,0	1/1:0,12:11:24.04:292,24,0	1/1:3,19:19:45.15:584,45,0	1/1:0,17:17:39.13:506,39,0	1/1:0,19:18:54.18:701,54,0	1/1:1,10:11:24.07:311,24,0	1/1:0,9:9:21.07:272,21,0	1/1:0,17:16:48.16:623,48,0	1/1:0,8:8:21.07:272,21,0	1/1:0,24:23:54.18:700,54,0	1/1:0,18:18:45.15:584,45,0	1/1:0,16:16:30.10:389,30,0	1/1:0,4:4:12.04:156,12,0	1/1:2,11:13:32.13:395,32,0	1/1:2,12:14:42.14:544,42,0	1/1:0,18:18:51.15:662,51,0	1/1:0,7:7:15.05:195,15,0	1/1:0,12:12:27.09:350,27,0	1/1:0,11:11:17.67:233,18,0	1/1:0,10:10:27.09:350,27,0	1/1:1,15:16:45.15:584,45,0	1/1:0,25:25:66.21:856,66,0	1/1:0,1:1:3.01:39,3,0
chr10	48611338	.	TTCCCCTCTTGCATAG	T	477.08	PASS	AC=8;AF=0.182;AN=44;BaseQRankSum=7.171;DP=654;FS=15.756;HRun=0;HaplotypeScore=218.8146;InbreedingCoeff=0.8579;MQ=63.35;MQ0=42;MQRankSum=-6.251;QD=5.75;ReadPosRankSum=-2.176;VQSLOD=1.3139;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:96.31:0,96,6538	0/0:10,0:10:27.09:0,27,1774	0/0:27,0:18:54.14:0,54,2873	0/0:31,0:18:46.91:0,47,2715	./.	0/0:27,0:27:78.25:0,78,4622	0/0:26,0:26:78.23:0,78,4413	1/1:17,14:14:0.99:137,1,0	0/0:23,0:23:60.21:0,60,3684	1/1:5,14:11:20.25:149,20,0	./.	0/0:34,0:34:93.31:0,93,5907	0/0:32,0:32:87.30:0,87,5852	./.	0/0:29,0:29:75.24:0,75,5253	0/0:26,0:26:75.24:0,75,4951	./.	1/1:7,6:9:3.01:129,3,0	0/0:24,0:21:54.09:0,54,2756	0/0:20,0:20:54.06:0,54,3281	0/0:47,0:46:99:0,123,8186	0/0:31,0:31:84.24:0,84,5380	0/0:24,0:24:63.17:0,63,3843	0/0:27,0:27:75.24:0,75,4951	./.	1/1:3,17:8:11.71:192,12,0	0/0:24,0:24:66.21:0,66,4352	./.
chr10	48611858	.	T	TCAATTCAGTTAACTGTCC	50501.03	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=8.011;DP=573;FS=2.283;HRun=0;HaplotypeScore=287.8208;InbreedingCoeff=0.9972;MQ=62.36;MQ0=1;MQRankSum=-18.006;QD=163.96;ReadPosRankSum=-1.524;VQSLOD=4.1385;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:69.20:0,69,3107	0/0:11,0:11:33.11:0,33,1461	0/0:16,0:14:31.92:0,32,1210	0/0:19,0:17:38.91:0,39,1068	1/1:20,7:27:69.22:4560,69,0	0/0:28,0:28:78.27:0,78,3422	0/0:21,0:21:63.18:0,63,2724	1/1:37,0:36:96.32:5586,96,0	0/0:19,0:19:51.14:0,51,2036	1/1:16,7:23:63.22:4123,63,0	1/1:16,8:23:63.22:4559,63,0	0/0:16,0:16:42.14:0,42,1966	0/0:15,0:15:42.14:0,42,1982	1/1:21,10:32:93.28:6279,93,0	0/0:25,0:25:69.24:0,69,3262	0/0:18,0:18:45.14:0,45,1992	1/1:12,2:14:27.09:1989,27,0	1/1:8,4:12:27.09:2028,27,0	1/1:16,0:18:44.61:2896,45,0	1/1:16,0:29:66.22:4132,66,0	1/1:15,0:16:23.96:902,24,0	0/0:21,0:21:57.18:0,57,2702	0/0:17,0:17:48.15:0,48,2282	0/0:15,0:15:45.11:0,45,1875	1/1:13,7:20:60.21:3941,60,0	1/1:19,7:26:75.21:4920,75,0	1/1:15,0:22:57.14:3566,57,0	1/1:4,2:6:15.05:1019,15,0
chr10	48611885	.	AAAC	A	7376.12	PASS	AB=0.835;AC=21;AF=0.375;AN=56;BaseQRankSum=8.360;DP=531;FS=4.564;HRun=0;HaplotypeScore=145.5037;InbreedingCoeff=0.7784;MQ=63.12;MQ0=0;MQRankSum=-11.307;QD=33.23;ReadPosRankSum=-0.828;VQSLOD=4.8226;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:72.14:0,72,1395	0/0:11,0:11:33.11:0,33,752	0/0:12,0:11:23.14:0,23,380	0/0:12,0:11:30.03:0,30,514	1/1:1,24:25:68.20:891,68,0	0/0:30,0:30:84.26:0,84,1792	0/0:21,0:21:63.22:0,63,1391	1/1:1,24:24:71.50:997,72,0	0/0:18,0:18:51.12:0,51,938	1/1:1,24:25:75.17:1095,75,0	1/1:2,18:20:53.90:751,54,0	0/0:20,0:20:60.19:0,60,1295	0/0:17,0:17:51.13:0,51,1017	1/1:0,23:23:60.20:952,60,0	0/0:28,0:28:81.23:0,81,1593	0/0:21,0:21:63.10:0,63,1311	1/1:0,8:8:18.06:290,18,0	0/1:2,8:10:6.97:360,0,7	0/1:18,1:19:97.72:98,0,390	0/0:27,0:27:45.83:0,46,832	0/0:10,0:10:0.27:0,0,138	0/0:22,0:22:66.21:0,66,1419	0/0:20,0:20:60.17:0,60,1170	0/0:16,0:16:45.15:0,45,997	1/1:0,20:20:39.13:627,39,0	1/1:3,22:25:74.69:1071,75,0	0/1:17,0:17:0.84:1,0,432	1/1:0,5:5:15.05:243,15,0
chr10	48611886	.	AAC	A	3830.16	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=12.469;DP=531;FS=5.175;HRun=0;HaplotypeScore=148.9843;InbreedingCoeff=0.7965;MQ=65.83;MQ0=0;MQRankSum=-10.693;QD=16.58;ReadPosRankSum=-0.849;VQSLOD=3.5020;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:72.03:0,72,1111	0/0:11,0:11:33.11:0,33,602	0/0:14,0:13:25.63:0,26,315	0/0:13,0:12:32.79:0,33,438	1/1:24,1:25:68.44:508,68,0	0/0:30,0:30:81.26:0,81,1408	0/0:21,0:21:63.21:0,63,1097	1/1:24,1:24:71.68:565,72,0	0/0:18,0:18:51.01:0,51,754	1/1:24,0:25:74.43:548,74,0	1/1:19,0:19:53.50:381,54,0	0/0:20,0:20:60.19:0,60,1028	0/0:16,0:16:45.14:0,45,769	1/1:23,0:23:59.18:432,59,0	0/0:27,0:27:78.01:0,78,1231	0/0:21,0:21:62.12:0,62,1033	1/1:8,0:8:17.90:134,18,0	1/1:10,0:10:9.92:162,10,0	0/1:19,0:19:78.99:79,0,199	0/0:27,0:27:16.42:0,16,495	0/1:10,0:10:2.50:2,0,62	0/0:22,0:22:66.10:0,66,1123	0/0:20,0:20:60.16:0,60,936	0/0:16,0:16:45.15:0,45,786	1/1:20,0:20:38.78:289,39,0	1/1:22,3:25:74.68:606,75,0	0/1:17,0:17:11.33:11,0,233	1/1:5,0:5:14.93:112,15,0
chr10	48612207	.	C	CACT	7093.31	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=8.935;DP=607;FS=14.085;HRun=0;HaplotypeScore=116.8927;InbreedingCoeff=0.9973;MQ=66.86;MQ0=1;MQRankSum=-4.807;QD=31.53;ReadPosRankSum=-0.263;VQSLOD=4.3476;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,99,1631	0/0:9,0:9:27.08:0,27,441	0/0:11,0:10:23.29:0,23,250	0/0:9,0:8:18.01:0,18,194	1/1:7,27:34:78.61:1375,79,0	0/0:29,0:29:84.29:0,84,1475	0/0:19,0:19:57.17:0,57,944	1/1:35,1:36:60.73:603,61,0	0/0:17,0:17:51.16:0,51,851	1/1:10,18:29:39.85:824,40,0	1/1:10,11:21:43.22:698,43,0	0/0:14,0:14:39.13:0,39,674	0/0:23,0:23:69.22:0,69,1165	1/1:4,12:16:23.16:478,23,0	0/0:27,0:27:81.26:0,81,1339	0/0:19,0:19:57.19:0,57,974	1/1:5,12:17:38.32:602,38,0	1/1:6,4:10:23.64:319,24,0	0/0:25,0:25:75.18:0,75,971	0/0:27,0:27:77.93:0,78,913	0/0:15,0:15:42.14:0,42,561	0/0:24,0:24:66.20:0,66,1074	0/0:35,0:35:99:0,99,1660	0/0:9,0:9:27.08:0,27,450	1/1:7,11:18:42.17:685,42,0	1/1:6,18:24:56.12:855,56,0	0/0:34,0:33:84.04:0,84,1042	1/1:5,14:19:30.11:654,30,0
chr10	48612208	.	A	ACTAT	5344.73	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=13.833;DP=609;FS=11.984;HRun=0;HaplotypeScore=133.7418;InbreedingCoeff=0.9962;MQ=66.95;MQ0=1;MQRankSum=-6.567;QD=24.18;ReadPosRankSum=0.049;VQSLOD=4.2516;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,99,1928	0/0:9,0:9:27.08:0,27,506	0/0:11,0:10:17.12:0,17,278	0/0:8,0:8:17.98:0,18,229	1/1:36,0:35:76.62:970,77,0	0/0:30,0:30:87.28:0,87,1761	0/0:19,0:19:57.17:0,57,1096	1/1:36,0:36:58:534,58,0	0/0:18,0:18:51.16:0,51,1003	1/1:26,1:27:46.77:646,47,0	1/1:20,1:21:43.59:545,44,0	0/0:13,0:13:39.13:0,39,807	0/0:23,0:23:69.22:0,69,1375	1/1:15,0:15:23.15:356,23,0	0/0:27,0:27:81.26:0,81,1575	0/0:22,0:22:57.19:0,57,1149	1/1:16,0:16:33.66:417,34,0	1/1:10,1:11:23.57:291,24,0	0/0:26,0:26:73.91:0,74,1058	0/0:26,0:26:78.06:0,78,1044	0/0:15,0:15:42.14:0,42,634	0/0:26,0:26:69.20:0,69,1289	0/0:34,0:35:99:0,102,1987	0/0:9,0:9:27.08:0,27,530	1/1:17,1:18:42.09:513,42,0	1/1:22,0:22:53.53:600,54,0	0/0:35,0:34:86.77:0,87,1178	1/1:19,0:19:35.49:471,35,0
chr10	48612211	.	A	AT	4734.20	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=7.927;DP=629;FS=7.229;HRun=10;HaplotypeScore=97.2726;InbreedingCoeff=0.9408;MQ=66.06;MQ0=1;MQRankSum=-5.114;QD=13.84;ReadPosRankSum=-1.299;VQSLOD=4.3663;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:98.77:0,99,795	0/0:10,0:10:20.95:0,21,172	0/1:10,0:9:4.20:4,0,31	0/0:9,0:8:10.87:0,11,66	1/1:37,0:37:77.13:410,77,0	0/0:31,0:31:86.86:0,87,710	0/0:20,0:20:50.89:0,51,411	1/1:15,4:38:66.13:378,66,0	0/0:18,0:18:47.92:0,48,391	1/1:27,0:28:49.84:259,50,0	1/1:20,0:21:40.65:226,41,0	0/0:16,0:16:41.91:0,42,342	0/0:21,1:23:29.94:0,30,437	1/1:15,0:15:25.60:128,26,0	0/0:27,1:28:36.90:0,37,510	0/0:23,0:23:24.99:0,25,411	1/1:14,0:16:34.27:180,34,0	1/1:7,0:11:22.84:119,23,0	1/1:6,18:25:56.98:590,57,0	1/1:3,23:28:47.15:648,47,0	1/1:1,15:16:39.10:416,39,0	0/0:27,0:27:62.91:0,63,517	0/0:35,0:35:89.84:0,90,734	0/0:9,0:9:26.93:0,27,216	1/1:17,0:19:40.80:209,41,0	1/1:22,0:23:51.81:292,52,0	1/1:6,28:34:69.01:718,69,0	1/1:19,0:19:22.48:159,22,0
chr10	48612389	.	T	TACACAC	6007.88	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=-0.606;DP=697;FS=5.990;HRun=0;HaplotypeScore=166.9075;InbreedingCoeff=0.8839;MQ=57.72;MQ0=33;MQRankSum=-7.470;QD=22.33;ReadPosRankSum=-5.375;VQSLOD=3.2039;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:45.10:0,45,717	0/0:6,0:6:15.04:0,15,263	0/0:72,0:24:32.03:0,32,384	0/1:75,0:24:9.69:10,0,421	1/1:12,5:15:18.05:274,18,0	0/0:25,0:24:29.86:0,30,933	0/0:30,0:30:60.09:0,60,1255	1/1:45,0:45:94.45:1962,94,0	0/0:23,0:23:54.18:0,54,1111	1/1:20,5:23:60.15:1456,60,0	1/1:17,3:20:18.72:172,19,0	0/0:23,0:23:47.95:0,48,941	0/0:21,0:21:48.15:0,48,922	1/1:6,7:13:11.82:160,12,0	0/0:22,0:21:48.12:0,48,774	0/0:19,0:19:54.19:0,54,1111	1/1:9,6:15:12.04:219,12,0	1/1:6,0:4:3.01:97,3,0	0/0:12,0:12:18.06:0,18,284	0/0:20,0:20:37.81:0,38,584	0/0:24,0:25:51.13:0,51,765	0/0:14,0:14:36.08:0,36,630	0/0:21,0:21:51.17:0,51,1071	0/0:32,0:32:78.22:0,78,1598	1/1:18,4:23:12.27:384,12,0	1/1:10,12:20:42.04:900,42,0	0/0:33,0:34:69.16:0,69,976	1/1:6,1:7:18.01:375,18,0
chr10	48612401	.	C	CAG	1184.10	PASS	AB=0.960;AC=17;AF=0.304;AN=56;BaseQRankSum=10.514;DP=692;FS=16.372;HRun=0;HaplotypeScore=140.4763;InbreedingCoeff=0.3451;MQ=55.98;MQ0=33;MQRankSum=-4.573;QD=5.24;ReadPosRankSum=-2.856;VQSLOD=1.5445;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:50.53:0,51,565	0/0:7,0:7:16.27:0,16,191	0/0:65,0:18:33.34:0,33,354	0/0:69,0:21:37.61:0,38,420	1/1:20,0:17:9.58:46,10,0	0/0:21,0:20:55.65:0,56,740	0/0:32,0:32:84.03:0,84,1087	0/0:44,0:43:18.56:0,19,259	0/0:27,0:26:72.13:0,72,941	0/1:25,0:23:19.19:19,0,49	1/1:19,0:19:16.32:71,16,0	0/0:22,0:22:60.11:0,60,807	0/0:22,0:22:60.14:0,60,800	1/1:11,0:11:10.94:52,11,0	0/0:23,0:22:49.25:0,49,574	0/0:22,0:22:63.16:0,63,865	0/1:16,0:16:20.32:20,0,21	0/0:5,0:4:11.46:0,11,67	0/1:9,2:11:10.81:128,0,11	0/1:22,0:22:16.21:178,0,16	0/1:23,4:26:31.44:200,0,31	0/0:16,0:16:48.09:0,48,629	0/0:24,0:24:66.14:0,66,884	0/0:33,0:33:90.24:0,90,1258	0/1:17,0:17:30.87:39,0,31	0/1:21,0:19:24.48:73,0,24	1/1:22,8:30:13.91:528,14,0	1/1:7,0:7:1.29:6,1,0
chr10	48612405	.	C	CAG	2600.68	PASS	AB=0.751;AC=32;AF=0.571;AN=56;BaseQRankSum=10.244;DP=698;FS=2.294;HRun=0;HaplotypeScore=150.9604;InbreedingCoeff=0.6631;MQ=54.74;MQ0=31;MQRankSum=-7.460;QD=6.76;ReadPosRankSum=-3.883;VQSLOD=2.9081;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:15,14:29:44.15:207,0,44	1/1:5,2:7:3.01:46,3,0	0/0:56,0:14:5.95:0,6,42	0/0:62,0:20:7.87:0,8,68	1/1:20,0:17:10.89:48,11,0	0/1:20,1:20:4.54:5,0,316	0/0:28,0:28:48.41:0,48,496	1/1:61,0:60:39.48:252,39,0	0/0:22,0:25:44.54:0,45,402	1/1:26,0:24:24.98:154,25,0	1/1:21,0:20:16.33:72,16,0	0/0:20,0:21:38.87:0,39,389	0/0:19,0:22:23.83:0,24,210	1/1:14,0:14:14.39:87,14,0	0/1:12,9:22:76.90:204,0,77	0/0:23,0:23:39.05:0,39,403	1/1:18,0:18:11.81:79,12,0	1/1:7,0:5:8.71:63,9,0	1/1:11,0:11:17.99:188,18,0	0/1:12,11:23:5.45:146,0,5	1/1:25,0:24:20.93:288,21,0	0/0:16,0:16:21:0,21,200	0/0:23,0:26:47.87:0,48,466	0/0:28,0:33:62.78:0,63,637	1/1:15,0:15:13.84:73,14,0	1/1:25,0:23:36.48:271,36,0	1/1:29,0:29:37.12:549,37,0	1/1:10,0:10:12.48:76,12,0
chr10	48612429	.	G	GATAGAGAGAGAGAA	8099.01	PASS	AB=0.879;AC=19;AF=0.339;AN=56;BaseQRankSum=3.871;DP=661;FS=6.725;HRun=0;HaplotypeScore=269.6430;InbreedingCoeff=0.7039;MQ=64.25;MQ0=14;MQRankSum=-7.017;QD=30.91;ReadPosRankSum=-4.253;VQSLOD=2.3259;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:28:28.73:0,29,938	0/0:6,0:6:9.02:0,9,156	0/0:22,0:13:2.29:0,2,383	0/0:42,0:29:62.57:0,63,996	1/1:12,1:27:14.20:283,14,0	0/0:22,0:21:63.14:0,63,1566	0/0:27,0:27:72.16:0,72,2194	0/1:55,0:54:6.99:1774,0,7	0/0:21,0:20:57.17:0,57,1954	0/1:16,0:35:11.82:1534,0,12	1/1:6,0:28:38.66:523,39,0	0/0:21,0:21:54.11:0,54,1767	0/0:18,0:18:47.99:0,48,1154	1/1:12,0:16:31.27:950,31,0	0/0:18,0:17:36.09:0,36,989	0/0:23,0:23:66.12:0,66,1904	1/1:13,0:14:27.18:644,27,0	1/1:1,0:6:3.01:188,3,0	0/1:19,0:19:33.31:33,0,517	0/0:31,0:31:66.69:0,67,980	0/0:22,0:22:51.94:0,52,940	0/0:11,0:11:30.09:0,30,1020	0/0:28,0:28:75.13:0,75,2248	0/0:30,0:30:78.22:0,78,2810	1/1:7,0:20:9.21:836,9,0	1/1:22,0:24:34.22:1017,34,0	0/0:28,0:28:42.53:0,43,944	1/1:9,0:9:26.51:317,27,0
chr10	48612964	.	CG	C	2971.51	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=10.444;DP=450;FS=15.644;HRun=2;HaplotypeScore=61.6697;InbreedingCoeff=0.9280;MQ=57.27;MQ0=24;MQRankSum=-1.032;QD=13.21;ReadPosRankSum=-1.011;VQSLOD=1.0237;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:59.39:0,59,642	0/0:6,0:6:17.95:0,18,161	0/0:32,1:7:11.71:0,12,82	0/0:25,0:4:7.48:0,7,62	1/1:4,25:29:56.39:518,56,0	0/0:13,0:12:17.46:0,17,228	0/0:11,0:10:23.98:0,24,268	1/1:7,13:19:39.62:351,40,0	0/0:7,0:7:15.02:0,15,165	1/1:2,14:15:17.98:170,18,0	1/1:6,16:21:35.82:331,36,0	0/0:17,0:17:50.24:0,50,465	0/0:11,0:11:17.99:0,18,197	1/1:1,9:10:5.90:40,6,0	0/0:19,0:19:47.70:0,48,573	0/0:21,0:21:56.61:0,57,631	1/1:2,13:15:21.06:237,21,0	1/1:5,5:9:7.56:63,8,0	1/1:15,2:16:31.53:268,32,0	1/1:13,3:16:31.30:248,31,0	1/1:6,0:6:8.96:69,9,0	0/0:6,0:6:15.05:0,15,213	0/0:21,0:21:58.46:0,58,518	0/0:12,0:12:22.63:0,23,302	1/1:4,13:16:7.46:105,7,0	1/1:3,17:20:53.77:446,54,0	1/1:15,2:15:18.57:181,19,0	1/1:8,2:8:17.96:169,18,0
chr10	48612965	.	GGA	G	1771.19	PASS	AB=0.954;AC=18;AF=0.321;AN=56;BaseQRankSum=10.453;DP=472;FS=0.000;HRun=0;HaplotypeScore=68.2666;InbreedingCoeff=0.1185;MQ=57.51;MQ0=23;MQRankSum=-0.006;QD=7.73;ReadPosRankSum=2.594;VQSLOD=2.9257;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:67.14:0,67,913	0/0:7,0:7:20.98:0,21,240	0/0:33,0:7:17.80:0,18,152	0/0:26,0:4:7.83:0,8,78	1/1:27,3:30:41.26:328,41,0	0/0:14,0:13:28.64:0,29,325	0/0:11,0:10:23.99:0,24,359	0/1:18,1:18:17.18:178,0,17	0/0:7,0:7:20.99:0,21,241	0/1:16,0:15:8.59:83,0,9	1/1:18,1:20:0.18:192,0,0	0/0:19,0:19:57.06:0,57,718	0/0:14,0:14:29.68:0,30,322	0/1:11,1:12:30.28:30,0,33	0/0:23,0:23:57.07:0,57,821	0/0:22,0:22:63.02:0,63,905	1/1:13,2:15:19.97:160,20,0	0/1:9,2:11:30.29:77,0,30	0/1:17,1:17:51.99:185,0,52	0/1:16,1:18:50.36:161,0,50	0/1:4,0:4:4.53:58,0,5	0/0:7,0:7:18.03:0,18,310	0/0:22,0:22:65.85:0,66,720	0/0:14,0:14:32.98:0,33,490	0/1:15,0:14:15.24:29,0,15	1/1:21,0:21:1.53:267,2,0	0/1:16,0:15:68.41:80,0,68	0/1:11,0:10:55.60:114,0,56
chr10	48613603	.	GTCCCC	G	280.72	PASS	AC=8;AF=0.182;AN=44;BaseQRankSum=4.084;DP=344;FS=0.000;HRun=0;HaplotypeScore=75.2968;InbreedingCoeff=0.8049;MQ=57.58;MQ0=17;MQRankSum=2.344;QD=20.05;ReadPosRankSum=-4.352;VQSLOD=1.7327;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,99,3282	0/0:5,0:4:9.03:0,9,300	0/0:17,0:10:30.10:0,30,999	0/0:13,0:12:36.12:0,36,990	1/1:1,0:1:3.01:51,3,0	0/0:30,0:30:84.25:0,84,2693	0/0:19,0:19:51.17:0,51,1525	1/1:4,5:5:15.05:253,15,0	0/0:11,0:11:33.11:0,33,1098	./.	1/1:3,0:1:3.01:47,3,0	0/0:16,0:16:48.16:0,48,1593	0/0:13,0:12:36.12:0,36,1198	./.	0/0:12,0:11:30.10:0,30,920	0/0:20,0:20:57.15:0,57,1556	./.	./.	0/0:25,0:24:72.25:0,72,2299	0/0:15,0:15:42.14:0,42,1399	0/0:28,0:24:66.23:0,66,2187	0/0:6,0:6:18.06:0,18,549	0/0:9,0:9:27.09:0,27,886	0/0:32,0:32:90.31:0,90,2851	1/1:1,0:1:3.01:53,3,0	./.	0/0:16,0:16:48.16:0,48,1412	./.
chr10	48614253	.	GGCA	G	1301.66	PASS	AB=0.945;AC=22;AF=0.393;AN=56;BaseQRankSum=12.622;DP=495;FS=2.998;HRun=0;HaplotypeScore=101.4342;InbreedingCoeff=0.8264;MQ=67.02;MQ0=4;MQRankSum=-12.105;QD=6.61;ReadPosRankSum=-0.628;VQSLOD=2.7694;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:37.68:0,38,694	0/0:6,0:6:15.05:0,15,280	0/0:13,0:13:24.07:0,24,415	0/0:25,0:21:1.83:0,2,574	1/1:14,0:14:14.88:104,15,0	0/0:20,0:20:27.08:0,27,513	0/0:25,2:27:14.07:0,14,1046	1/1:34,0:33:44.34:319,44,0	0/0:17,0:17:36.12:0,36,709	1/1:14,0:14:17.84:124,18,0	1/1:7,0:7:8.93:63,9,0	0/0:18,0:18:42.14:0,42,854	0/1:19,1:20:1.04:1,0,708	1/1:11,0:11:17.86:126,18,0	0/0:15,0:15:36.12:0,36,710	0/1:14,1:15:7.06:7,0,609	1/1:21,0:21:29.74:208,30,0	1/1:11,0:11:14.91:116,15,0	0/0:11,0:10:15.04:0,15,272	0/0:17,0:17:15.05:0,15,302	0/0:32,0:32:61.08:0,61,1189	0/0:7,0:7:9.03:0,9,157	0/0:8,0:7:18.05:0,18,319	0/0:30,0:30:81.28:0,81,1579	1/1:16,0:15:17.84:124,18,0	1/1:24,0:24:29.76:210,30,0	0/0:18,0:18:36.12:0,36,708	1/1:10,0:8:14.90:110,15,0
chr10	48614268	.	AGCAG	A	2300.96	PASS	AB=0.634;AC=11;AF=0.196;AN=56;BaseQRankSum=13.225;DP=464;FS=2.775;HRun=0;HaplotypeScore=101.3282;InbreedingCoeff=0.0634;MQ=66.20;MQ0=4;MQRankSum=-12.074;QD=17.84;ReadPosRankSum=3.756;VQSLOD=3.3360;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:90.25:0,90,1777	0/0:5,0:5:15.05:0,15,422	0/0:16,0:15:42.14:0,42,915	0/0:33,0:29:81.20:0,81,1575	0/1:2,8:10:3.87:158,0,4	0/0:18,0:18:51.16:0,51,1111	0/0:26,0:26:73.74:0,74,1806	0/1:9,15:24:98.29:520,0,98	0/0:17,0:17:51.17:0,51,1287	0/1:5,6:11:62.50:183,0,62	0/1:2,4:6:9.88:95,0,10	0/0:19,0:19:54.18:0,54,1386	0/0:18,0:18:49.98:0,50,1259	0/1:4,7:11:18.75:223,0,19	0/0:15,0:15:45.15:0,45,1171	0/0:21,0:21:59.01:0,59,1380	0/1:7,9:16:9.36:380,0,9	0/1:7,4:12:99:154,0,127	0/0:10,0:9:27.09:0,27,631	0/0:8,0:8:18.06:0,18,463	0/0:31,0:31:92.09:0,92,2170	0/0:7,0:7:21.07:0,21,431	0/0:8,0:7:24.08:0,24,587	0/0:32,0:32:96.33:0,96,2555	0/1:5,7:12:20.79:174,0,21	0/1:8,11:19:86.14:384,0,86	0/0:15,0:15:45.15:0,45,1158	1/1:0,5:5:15.05:184,15,0
chr10	48614276	.	ACG	A	1421.57	PASS	AB=0.663;AC=12;AF=0.214;AN=56;BaseQRankSum=11.947;DP=462;FS=7.391;HRun=0;HaplotypeScore=88.1556;InbreedingCoeff=0.1932;MQ=68.08;MQ0=2;MQRankSum=-11.947;QD=9.80;ReadPosRankSum=-0.057;VQSLOD=2.1576;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:81.28:0,81,1616	0/0:4,0:4:12.04:0,12,243	0/0:18,0:16:45.15:0,45,851	0/0:31,0:27:69.23:0,69,1355	0/1:4,8:12:4.18:122,0,4	0/0:13,0:13:39.13:0,39,782	0/0:26,0:26:75.03:0,75,1419	0/1:13,15:28:56.94:335,0,57	0/0:16,0:16:48.16:0,48,948	0/1:6,6:12:42.31:97,0,42	0/1:3,4:7:14.67:49,0,15	0/0:20,0:20:57.03:0,57,1083	0/0:16,0:16:45.12:0,45,827	0/1:7,7:14:22.42:158,0,22	0/0:15,0:15:45.15:0,45,891	0/0:20,0:20:57.11:0,57,1033	1/1:10,9:19:1.50:253,2,0	0/1:10,4:14:68.50:69,0,121	0/0:8,0:8:24.08:0,24,450	0/0:10,0:10:24.07:0,24,445	0/0:30,0:30:90.24:0,90,1694	0/0:6,0:6:18.05:0,18,310	0/0:7,0:6:21.03:0,21,346	0/0:30,0:30:90.31:0,90,1779	0/1:6,7:13:1.15:131,0,1	0/1:10,11:21:65.13:248,0,65	0/0:17,0:17:51.18:0,51,1022	1/1:0,5:5:14.93:114,15,0
chr10	48614693	.	TAC	T	809.90	PASS	AB=0.930;AC=13;AF=0.241;AN=54;BaseQRankSum=4.012;DP=501;FS=4.299;HRun=0;HaplotypeScore=75.0451;InbreedingCoeff=0.4497;MQ=55.41;MQ0=13;MQRankSum=1.731;QD=5.09;ReadPosRankSum=1.755;VQSLOD=2.4244;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:51.01:0,51,761	0/0:12,0:12:19.26:0,19,298	./.	0/0:24,0:7:2.15:0,2,7	0/0:8,0:18:14.71:0,15,108	0/1:18,3:21:7.72:8,0,349	0/0:20,0:20:30.10:0,30,461	0/0:38,0:35:45.74:0,46,430	0/0:15,0:14:8.10:0,8,291	0/0:18,0:24:35.19:0,35,276	0/0:4,0:14:13.98:0,14,74	0/0:15,0:15:33.11:0,33,488	0/0:16,1:18:45.14:0,45,666	0/0:6,0:9:5.74:0,6,38	0/1:17,0:17:2.14:2,0,424	0/0:17,0:17:33.11:0,33,506	0/0:8,0:14:1.25:0,1,3	0/0:15,0:14:16.82:0,17,113	1/1:7,5:13:17.88:185,18,0	1/1:11,8:20:22.67:210,23,0	1/1:3,16:19:0.84:145,1,0	0/1:13,1:14:21.03:21,0,330	0/1:15,2:17:4.10:4,0,382	0/1:17,1:18:0.25:0,0,496	0/0:11,0:19:12.19:0,12,86	0/0:20,0:26:28.93:0,29,228	1/1:3,16:19:33.20:386,33,0	0/0:5,0:5:8.76:0,9,58
chr10	48616983	.	TA	T	3474.34	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=12.865;DP=618;FS=1.309;HRun=4;HaplotypeScore=55.0255;InbreedingCoeff=0.9974;MQ=72.72;MQ0=0;MQRankSum=-1.458;QD=31.30;ReadPosRankSum=2.237;VQSLOD=4.0180;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,111,1545	0/0:10,0:10:27.08:0,27,363	0/0:9,0:9:21.07:0,21,286	0/0:13,0:13:32.70:0,33,430	0/0:31,0:31:93.30:0,93,1283	0/0:28,0:28:84.27:0,84,1153	0/0:20,0:20:60.18:0,60,821	0/0:40,0:40:99:0,117,1579	0/0:16,1:17:30.21:0,30,612	0/0:34,0:34:93.30:0,93,1288	0/0:32,0:32:90.29:0,90,1242	0/0:17,0:17:51.17:0,51,713	0/0:22,0:22:63.20:0,63,865	0/0:12,0:12:33.11:0,33,462	0/0:20,0:20:60.19:0,60,823	0/0:22,0:22:66.22:0,66,924	0/0:24,0:24:69.23:0,69,965	0/0:10,0:10:24.08:0,24,336	1/1:0,17:17:51.15:605,51,0	1/1:2,35:37:99:1215,102,0	1/1:2,19:21:42.13:504,42,0	0/0:18,0:18:54.17:0,54,739	0/0:25,0:25:72.23:0,72,990	0/0:17,0:17:51.16:0,51,698	0/0:19,0:19:57.19:0,57,796	0/0:20,0:20:60.20:0,60,840	1/1:1,35:36:96.29:1151,96,0	0/0:10,0:10:27.09:0,27,378
chr10	48617708	.	A	ATATG	1929.35	PASS	AB=1.000;AC=11;AF=0.212;AN=52;BaseQRankSum=2.872;DP=684;FS=0.667;HRun=0;HaplotypeScore=172.4661;InbreedingCoeff=0.7271;MQ=68.33;MQ0=7;MQRankSum=1.121;QD=10.96;ReadPosRankSum=-3.865;VQSLOD=2.6658;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:40.39:0,40,390	0/0:9,0:10:18.03:0,18,219	0/1:26,0:16:1.09:1,0,7	0/1:25,0:19:2.45:2,0,12	0/0:35,0:35:0.85:0,1,3	0/0:30,0:30:51.09:0,51,670	0/0:13,0:13:24:0,24,243	0/0:14,0:32:23.79:0,24,179	0/0:16,0:16:48.07:0,48,623	0/0:45,0:44:95.37:0,95,816	0/0:17,0:17:2.82:0,3,14	0/0:26,0:26:59.95:0,60,685	0/0:25,0:25:44.99:0,45,481	0/1:22,0:22:0.02:0,0,0	0/0:36,0:36:84.11:0,84,1040	0/0:19,0:19:42.01:0,42,441	0/0:18,0:18:6.01:0,6,57	./.	1/1:9,6:15:20.97:217,21,0	1/1:4,33:38:39.13:912,39,0	1/1:3,9:12:12.04:285,12,0	0/0:17,0:17:24.02:0,24,287	0/0:25,0:25:44.09:0,44,604	0/0:21,0:21:42.01:0,42,481	./.	0/0:22,0:22:35.96:0,36,313	1/1:6,31:37:30.90:661,31,0	0/0:14,0:14:11.97:0,12,96
chr10	48617732	.	GTATGTATC	G	4163.28	PASS	AB=0.917;AC=18;AF=0.333;AN=54;BaseQRankSum=8.880;DP=682;FS=7.421;HRun=0;HaplotypeScore=199.9069;InbreedingCoeff=0.4127;MQ=58.73;MQ0=9;MQRankSum=0.954;QD=13.05;ReadPosRankSum=-2.474;VQSLOD=1.2936;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:47.29:0,47,394	0/0:8,0:8:24.01:0,24,519	0/0:14,0:3:8.86:0,9,60	0/0:13,0:7:6.54:0,7,48	1/1:2,35:37:0.29:2,0,0	0/0:22,0:22:63.09:0,63,1819	0/0:17,0:17:47.41:0,47,878	0/1:27,0:26:99:174,0,139	0/0:24,0:24:69.63:0,70,2352	1/1:0,50:50:99:2268,144,0	1/1:2,16:19:2.84:17,3,0	0/0:32,0:32:82.73:0,83,1931	0/0:19,0:19:13.97:0,14,1356	0/1:0,23:23:0.14:0,0,0	0/0:40,0:40:99:0,120,3382	0/0:25,0:25:75.03:0,75,1330	1/1:0,15:15:6.02:168,6,0	0/0:3,17:20:2.98:0,3,22	0/1:16,0:13:21.46:21,0,343	0/1:41,0:41:16.77:17,0,1169	0/1:14,0:14:52.87:53,0,296	0/0:15,0:15:36.02:0,36,814	0/0:25,0:25:72.06:0,72,1668	0/0:22,0:22:54.06:0,54,1444	./.	1/1:0,25:25:71.18:1136,71,0	0/1:41,0:41:88.48:88,0,872	1/1:11,0:11:26.95:219,27,0
chr10	48617736	.	GTATC	G	2162.22	PASS	AB=0.993;AC=18;AF=0.333;AN=54;BaseQRankSum=7.110;DP=682;FS=10.118;HRun=0;HaplotypeScore=169.1257;InbreedingCoeff=0.4260;MQ=58.88;MQ0=7;MQRankSum=0.546;QD=6.45;ReadPosRankSum=-2.259;VQSLOD=1.5149;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:12,26:38:21.07:339,21,0	0/1:8,0:8:5.46:5,0,243	0/0:14,0:6:6:0,6,54	0/0:12,0:5:2.80:0,3,13	0/1:36,0:36:0.01:0,0,1	0/0:22,0:22:48.09:0,48,962	0/0:18,0:18:23.03:0,23,450	0/0:32,0:31:38.88:0,39,329	0/0:25,0:25:63.13:0,63,1268	1/1:50,0:49:95.81:937,96,0	0/1:16,0:17:0.07:1,0,0	0/0:33,0:33:62.74:0,63,980	0/0:20,0:20:29.84:0,30,572	0/1:23,0:23:0.13:0,0,0	0/0:40,0:40:92.94:0,93,1649	0/0:25,0:25:53.98:0,54,636	1/1:15,0:15:6.02:71,6,0	0/0:18,0:18:2.98:0,3,22	0/1:16,0:13:61.42:61,0,76	0/1:42,0:42:61.83:62,0,351	0/1:15,0:15:80.29:98,0,80	0/0:13,0:13:27.04:0,27,427	0/0:23,0:23:42.06:0,42,729	0/0:24,0:24:48.03:0,48,773	./.	1/1:25,0:25:56.65:538,57,0	0/1:41,0:41:99:120,0,229	1/1:9,0:9:11.98:98,12,0
chr10	48618405	.	AAAAG	A	3824.30	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=12.637;DP=526;FS=3.082;HRun=0;HaplotypeScore=111.3617;InbreedingCoeff=0.9432;MQ=62.82;MQ0=5;MQRankSum=-11.514;QD=20.90;ReadPosRankSum=2.786;VQSLOD=3.5407;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:54.05:0,54,1520	0/0:4,0:4:12.04:0,12,291	0/0:32,0:14:16.59:0,17,388	0/0:25,0:14:11.17:0,11,271	1/1:8,12:20:28.99:403,29,0	0/0:25,0:25:71.69:0,72,1443	0/0:10,0:10:23.27:0,23,436	1/1:26,6:32:44.25:481,44,0	0/0:16,0:15:48.16:0,48,944	1/1:7,10:17:27.35:441,27,0	1/1:6,11:17:35.92:399,36,0	0/0:14,0:14:40.93:0,41,821	0/0:23,0:23:68.26:0,68,1373	1/1:1,14:15:20.82:258,21,0	0/0:18,0:18:52.04:0,52,1000	0/0:20,0:20:42.20:0,42,1142	1/1:5,18:23:30.06:400,30,0	1/1:0,4:4:3.01:42,3,0	0/0:22,0:22:57.04:0,57,916	0/0:17,0:17:48.13:0,48,976	0/0:7,0:7:17.55:0,18,311	0/0:15,0:15:45.14:0,45,1057	0/0:18,0:18:53.65:0,54,867	0/0:20,0:20:29.84:0,30,974	1/1:12,16:28:56.94:631,57,0	1/1:9,16:24:26.31:683,26,0	0/0:26,0:26:30.07:0,30,518	1/1:0,2:2:6.02:87,6,0
chr10	48618413	.	C	CAA	749.08	PASS	AB=0.833;AC=10;AF=0.179;AN=56;BaseQRankSum=-4.630;DP=567;FS=3.698;HRun=14;HaplotypeScore=119.4223;InbreedingCoeff=0.5951;MQ=61.38;MQ0=5;MQRankSum=3.451;QD=7.34;ReadPosRankSum=-1.499;VQSLOD=1.3151;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:31:48.03:0,48,401	0/1:1,0:4:6.33:6,0,26	0/0:33,0:13:5.24:0,5,34	0/1:22,0:11:7.75:8,0,39	0/0:25,0:25:32.21:0,32,171	0/0:24,0:26:43.56:0,44,395	0/0:8,0:9:8.42:0,8,109	0/0:39,0:39:56.87:0,57,388	0/0:17,0:16:26.25:0,26,204	0/0:21,0:22:44.78:0,45,235	0/0:16,0:17:33.44:0,33,184	0/0:15,0:15:2.42:0,2,127	0/0:25,0:25:15.74:0,16,267	0/0:17,0:18:28.40:0,28,171	0/0:25,0:25:52.31:0,52,394	0/0:19,0:21:13.35:0,13,255	0/0:25,0:25:30.41:0,30,146	0/0:4,0:4:2.74:0,3,12	1/1:12,11:27:19.61:402,20,0	1/1:5,8:15:26.93:290,27,0	1/1:4,3:8:7.89:151,8,0	0/0:14,0:14:29.75:0,30,250	0/0:17,0:17:29.28:0,29,225	0/0:15,0:20:12.91:0,13,182	0/0:29,0:30:56.92:0,57,340	0/0:28,0:28:59.47:0,59,318	1/1:8,18:26:3.90:42,4,0	0/0:2,0:2:5.49:0,5,24
chr10	48619220	.	AC	A	5505.30	PASS	AB=0.522;AC=19;AF=0.339;AN=56;BaseQRankSum=11.570;DP=473;FS=1.774;HRun=1;HaplotypeScore=49.7051;InbreedingCoeff=0.9245;MQ=77.32;MQ0=4;MQRankSum=0.428;QD=36.22;ReadPosRankSum=-0.293;VQSLOD=4.6825;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:51.16:0,51,714	0/0:5,0:5:15.05:0,15,218	0/0:19,0:14:24.06:0,24,388	0/0:37,0:23:15.38:0,15,477	1/1:0,15:15:45.03:558,45,0	0/0:29,0:28:87.27:0,87,1249	0/0:13,0:13:39.10:0,39,533	1/1:0,32:32:96.21:1205,96,0	0/0:17,0:17:48.13:0,48,663	1/1:0,22:22:66.22:922,66,0	1/1:0,13:13:33.02:417,33,0	0/0:11,0:11:33.09:0,33,454	0/0:20,0:20:57.12:0,57,754	1/1:0,10:10:27.09:377,27,0	0/0:18,0:18:54.12:0,54,708	0/0:15,0:15:45.11:0,45,633	1/1:1,13:14:19.41:405,19,0	1/1:0,16:16:45.15:628,45,0	0/0:18,0:18:54.16:0,54,763	0/0:15,0:15:45.15:0,45,656	0/0:30,0:30:90.25:0,90,1253	0/0:10,0:10:30.10:0,30,439	0/0:13,0:13:39.12:0,39,551	0/0:15,0:15:45.15:0,45,657	1/1:0,10:10:21.07:294,21,0	0/1:1,11:12:7.85:407,0,8	0/0:17,0:16:51.15:0,51,724	1/1:0,8:8:21.07:293,21,0
chr10	48620443	.	TACAC	T	82.80	PASS	AC=6;AF=0.136;AN=44;BaseQRankSum=1.292;DP=413;FS=1.928;HRun=0;HaplotypeScore=72.6190;InbreedingCoeff=0.4633;MQ=70.78;MQ0=11;MQRankSum=-0.708;QD=1.40;ReadPosRankSum=0.596;VQSLOD=1.5935;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:28,3:31:6:69,6,0	0/0:3,0:3:3.01:0,3,70	./.	./.	0/0:9,0:9:9.03:0,9,182	0/0:17,0:16:2.97:0,3,41	0/0:24,0:23:8.65:0,9,190	./.	0/0:9,0:9:2.67:0,3,43	0/0:21,0:20:33.11:0,33,655	0/0:8,0:8:3.01:0,3,52	1/1:15,0:17:2.99:28,3,0	./.	0/0:15,0:15:8.65:0,9,115	0/0:9,0:10:18.06:0,18,322	0/0:10,0:11:8.77:0,9,153	0/0:21,0:21:12.01:0,12,184	0/0:18,0:18:21.07:0,21,415	0/0:9,0:9:6.02:0,6,139	./.	0/0:35,0:35:12.04:0,12,263	./.	0/0:8,0:8:2.97:0,3,20	1/1:8,2:10:6.02:92,6,0	0/0:19,0:18:6.02:0,6,130	0/0:18,0:16:22.32:0,22,386	0/0:12,0:11:12.04:0,12,231	0/0:6,0:6:0.47:0,0,1
chr10	48621095	.	A	AT	5385.91	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-11.545;DP=500;FS=3.778;HRun=8;HaplotypeScore=47.1162;InbreedingCoeff=0.9740;MQ=74.25;MQ0=1;MQRankSum=0.736;QD=28.80;ReadPosRankSum=-1.552;VQSLOD=4.6488;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:48.01:0,48,435	0/0:9,0:9:24.01:0,24,220	0/0:11,0:11:16.22:0,16,134	0/0:11,0:9:3.86:0,4,51	1/1:2,24:26:71.97:782,72,0	0/0:24,0:23:63.03:0,63,576	0/0:13,0:13:39.02:0,39,357	1/1:6,21:27:63.66:727,64,0	0/0:16,0:16:42.01:0,42,384	1/1:1,18:19:54.13:603,54,0	1/1:3,17:19:45.09:504,45,0	0/0:20,0:20:51.02:0,51,467	0/0:16,0:16:42:0,42,378	1/1:2,16:18:45.13:519,45,0	0/0:17,0:17:48.02:0,48,439	0/0:27,0:27:66.03:0,66,604	1/1:2,15:17:45.13:519,45,0	1/1:0,18:18:45.13:519,45,0	0/0:26,0:26:57:0,57,522	0/0:21,0:21:44.98:0,45,407	0/0:16,0:16:39.01:0,39,357	0/0:9,0:9:21:0,21,192	0/0:12,0:12:26.97:0,27,241	0/0:17,0:17:44.99:0,45,407	1/1:1,16:17:36.11:415,36,0	1/1:1,17:18:51.10:555,51,0	0/0:30,0:30:84.04:0,84,768	1/1:0,7:7:21.06:242,21,0
chr10	48621589	.	GT	G	4154.80	PASS	AB=0.941;AC=21;AF=0.375;AN=56;BaseQRankSum=8.810;DP=369;FS=4.106;HRun=2;HaplotypeScore=39.8567;InbreedingCoeff=0.9010;MQ=60.20;MQ0=4;MQRankSum=-5.196;QD=28.65;ReadPosRankSum=0.789;VQSLOD=3.1149;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:15:42.09:0,42,582	0/0:5,0:5:9.03:0,9,135	0/0:11,0:5:9.17:0,9,143	0/0:9,2:7:18.03:0,18,245	0/0:14,0:14:36.07:0,36,493	0/0:11,0:11:30.10:0,30,449	0/0:21,1:22:27.28:0,27,905	1/1:7,19:24:54.13:681,54,0	0/0:11,0:11:30.10:0,30,450	0/0:16,0:16:45.15:0,45,675	0/0:16,0:16:39.12:0,39,558	1/1:0,6:6:18.06:233,18,0	1/1:0,15:15:45.15:583,45,0	0/0:6,0:6:18.06:0,18,270	0/0:15,0:15:39.13:0,39,585	0/0:8,0:8:24.08:0,24,360	0/0:31,0:29:75.24:0,75,1102	0/1:15,1:14:8.82:9,0,374	1/1:4,15:17:42.12:530,42,0	1/1:1,14:15:36.12:466,36,0	1/1:1,8:9:21.07:272,21,0	1/1:1,6:7:18.02:215,18,0	1/1:0,11:11:27.09:350,27,0	1/1:0,4:4:12.04:156,12,0	0/0:13,0:13:36.12:0,36,539	0/0:13,0:13:33.11:0,33,494	1/1:0,17:17:51.17:660,51,0	0/0:5,0:5:12.04:0,12,180
chr10	48621778	.	GA	G	3915.78	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=10.570;DP=508;FS=1.714;HRun=9;HaplotypeScore=49.3770;InbreedingCoeff=0.9931;MQ=69.69;MQ0=0;MQRankSum=-0.447;QD=21.63;ReadPosRankSum=3.548;VQSLOD=4.3409;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:69.16:0,69,781	0/0:10,0:10:24.07:0,24,277	0/0:11,0:11:22.43:0,22,250	0/0:8,0:8:11.98:0,12,122	1/1:5,15:20:45.02:412,45,0	0/0:12,0:12:36.09:0,36,402	0/0:9,0:9:24.06:0,24,266	0/0:39,0:39:99:0,111,1265	0/0:16,0:16:45.12:0,45,508	1/1:3,19:22:56.99:511,57,0	1/1:3,13:16:33:302,33,0	0/0:18,0:18:54.16:0,54,621	0/0:13,0:13:24.06:0,24,269	1/1:1,10:11:30.02:275,30,0	0/0:15,0:15:36.11:0,36,416	0/0:14,0:15:38.95:0,39,430	1/1:2,29:31:75.04:686,75,0	1/1:2,11:13:33.01:302,33,0	0/0:22,0:22:57.17:0,57,657	0/0:21,0:21:51.15:0,51,589	0/0:8,0:8:24.07:0,24,277	0/0:15,0:15:39.12:0,39,450	0/0:24,0:24:66.18:0,66,752	0/0:15,0:15:39.12:0,39,450	1/1:5,19:24:54.02:494,54,0	1/1:3,23:26:63.03:577,63,0	0/0:27,0:27:81.22:0,81,922	1/1:1,17:18:39.02:357,39,0
chr10	48624000	.	G	GA	613.03	PASS	AB=0.887;AC=13;AF=0.232;AN=56;BaseQRankSum=2.359;DP=507;FS=4.169;HRun=14;HaplotypeScore=75.9355;InbreedingCoeff=0.2238;MQ=73.62;MQ0=1;MQRankSum=-0.639;QD=3.39;ReadPosRankSum=-5.276;VQSLOD=-0.6305;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:39:35.71:0,36,351	0/0:5,0:5:5.79:0,6,37	0/1:20,0:13:1.79:2,0,34	0/1:11,0:11:2.33:2,0,14	0/1:22,4:26:12.77:13,0,175	0/0:14,0:14:26.44:0,26,173	0/0:16,0:16:10.33:0,10,170	0/0:22,2:27:13.03:0,13,197	0/0:13,0:13:18.09:0,18,116	0/0:18,0:19:11.11:0,11,93	0/0:13,0:14:22.14:0,22,139	0/0:22,0:22:12.58:0,13,189	0/0:19,0:19:36.59:0,37,234	0/1:11,1:12:7.96:8,0,157	0/0:14,3:17:9.14:0,9,185	0/0:14,2:15:0.15:0,0,127	0/1:22,1:24:19.58:20,0,222	0/0:24,0:24:27.64:0,28,270	1/1:9,5:15:22.38:209,22,0	0/1:7,10:18:28.09:147,0,28	1/1:1,8:9:11.99:103,12,0	0/1:7,2:9:12.89:13,0,49	0/0:14,1:15:1.77:0,2,130	0/0:15,0:16:17.96:0,18,213	0/0:8,0:9:16.80:0,17,102	0/0:16,0:18:7.92:0,8,129	1/1:11,20:34:5.54:248,6,0	0/0:22,0:23:42.59:0,43,267
chr10	48624315	.	G	GA	236.51	PASS	AB=0.857;AC=2;AF=0.037;AN=54;BaseQRankSum=0.051;DP=400;FS=2.489;HRun=10;HaplotypeScore=81.7977;InbreedingCoeff=0.3026;MQ=54.58;MQ0=15;MQRankSum=-5.263;QD=8.76;ReadPosRankSum=-3.669;VQSLOD=1.9399;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:47.46:0,47,372	0/0:5,0:5:5.86:0,6,48	./.	0/0:11,1:5:1.55:0,2,4	0/0:19,0:20:28.83:0,29,219	0/0:17,0:16:35.91:0,36,288	0/0:14,0:14:17.90:0,18,145	0/1:15,9:23:7.19:310,0,7	0/0:6,0:6:14.96:0,15,120	0/0:20,0:20:41.89:0,42,340	0/0:17,0:14:11.94:0,12,98	0/0:9,0:9:17.61:0,18,147	0/0:10,0:11:10.97:0,11,80	0/0:12,0:11:17.88:0,18,148	0/0:14,0:12:20.90:0,21,169	0/0:8,0:8:11.91:0,12,93	0/0:19,0:19:35.81:0,36,292	0/0:17,0:16:21.68:0,22,193	0/0:14,0:13:23.90:0,24,190	0/0:13,0:11:11.84:0,12,98	0/1:2,0:2:0:0,0,0	0/0:5,0:5:5.99:0,6,49	0/0:15,0:13:8.83:0,9,73	0/0:12,0:12:26.89:0,27,212	0/0:23,0:24:40.60:0,41,309	0/0:27,0:28:34.91:0,35,277	0/0:15,0:15:23.90:0,24,196	0/0:13,0:10:11.89:0,12,94
chr10	48624366	.	AT	A	5747.59	PASS	AB=0.962;AC=19;AF=0.339;AN=56;BaseQRankSum=6.502;DP=415;FS=5.473;HRun=1;HaplotypeScore=55.0808;InbreedingCoeff=0.8852;MQ=78.04;MQ0=1;MQRankSum=-1.360;QD=31.93;ReadPosRankSum=1.926;VQSLOD=4.3584;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:33.08:0,33,459	0/0:9,0:9:27.05:0,27,354	0/1:24,1:14:8.61:9,0,228	0/0:28,1:16:8.44:0,8,179	1/1:2,19:21:60.16:789,60,0	0/0:17,0:17:50.53:0,51,708	0/0:8,0:8:24.07:0,24,332	0/0:30,0:30:84.12:0,84,1117	0/0:10,0:10:30.10:0,30,419	1/1:0,22:22:66.21:904,66,0	1/1:0,13:13:39:496,39,0	0/0:6,0:6:15.02:0,15,181	0/0:8,1:9:27.07:0,27,374	1/1:0,13:13:30.10:418,30,0	0/0:19,0:19:54.16:0,54,765	0/0:12,0:12:36.11:0,36,505	1/1:0,14:14:42.14:578,42,0	1/1:1,14:14:42.03:559,42,0	0/0:20,0:20:60.13:0,60,754	0/0:13,0:13:39.12:0,39,551	0/0:5,0:5:15.05:0,15,218	0/0:1,0:1:3.01:0,3,44	0/0:12,0:12:36:0,36,423	0/0:5,0:5:14.96:0,15,188	1/1:1,23:24:49.71:661,50,0	1/1:0,27:27:81.20:1082,81,0	0/0:12,0:12:35.79:0,36,429	1/1:0,6:6:18.06:251,18,0
chr10	48625360	.	G	GA	1307.79	PASS	AB=0.884;AC=34;AF=0.607;AN=56;BaseQRankSum=4.090;DP=433;FS=2.587;HRun=16;HaplotypeScore=59.4191;InbreedingCoeff=0.1072;MQ=63.26;MQ0=12;MQRankSum=-1.941;QD=3.49;ReadPosRankSum=-0.108;VQSLOD=-0.1293;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:17,3:22:56.37:56,0,89	0/1:7,0:7:6.77:7,0,32	0/1:31,1:7:6.33:23,0,6	0/0:12,0:6:4.39:0,4,21	1/1:10,5:24:17.84:167,18,0	0/1:15,1:20:20.61:21,0,49	0/1:10,2:12:3.46:3,0,78	0/1:26,0:27:20.61:21,0,103	0/1:10,2:12:3.51:4,0,80	1/1:9,7:18:24.26:149,24,0	1/1:3,1:8:5.80:33,6,0	0/0:14,0:15:8.02:0,8,122	0/0:12,2:15:3.52:0,4,105	1/1:6,0:8:16.89:81,17,0	0/0:11,0:12:21.53:0,22,112	0/1:8,1:9:4.29:4,0,70	1/1:11,2:15:26.77:163,27,0	1/1:8,0:12:11.36:57,11,0	1/1:10,7:19:8.38:134,8,0	1/1:12,2:13:7.56:127,8,0	0/1:10,5:15:27.80:28,0,60	0/0:4,0:4:8.74:0,9,50	0/1:9,0:9:4.01:4,0,52	0/1:20,2:24:9.05:9,0,132	1/1:2,1:7:8.71:53,9,0	1/1:11,2:14:18.48:119,18,0	0/1:11,11:21:21.41:36,0,21	1/1:12,2:22:3.95:180,4,0
chr10	48626218	.	A	AT	1533.40	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-11.076;DP=592;FS=0.000;HRun=8;HaplotypeScore=51.6218;InbreedingCoeff=0.9840;MQ=73.96;MQ0=0;MQRankSum=-1.049;QD=25.14;ReadPosRankSum=-5.205;VQSLOD=1.7120;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:66.03:0,66,601	0/0:7,0:7:18:0,18,165	0/0:17,0:16:32.98:0,33,293	0/0:11,0:10:20.95:0,21,179	0/0:27,1:28:43.42:0,43,652	0/0:20,0:20:60.02:0,60,544	0/0:13,0:14:38.03:0,38,326	1/1:11,50:61:99:1628,144,0	0/0:19,0:19:45.01:0,45,412	0/0:20,0:20:54.03:0,54,494	0/0:16,0:17:47.06:0,47,418	0/0:25,0:25:66.01:0,66,595	0/0:19,0:19:54.03:0,54,494	0/0:9,0:9:26.99:0,27,239	0/0:28,0:28:75.04:0,75,686	0/0:34,0:34:99:0,99,897	0/0:22,0:22:59.95:0,60,530	0/0:11,0:11:27.01:0,27,247	0/0:19,0:19:42:0,42,384	0/0:21,0:22:56.06:0,56,500	0/0:19,0:19:54.03:0,54,494	0/0:25,0:25:74.97:0,75,669	0/0:22,0:22:60.03:0,60,549	0/0:12,0:12:27.01:0,27,247	0/0:27,0:27:78.03:0,78,709	0/0:19,0:19:57.02:0,57,518	0/0:30,0:29:89.90:0,90,805	0/0:11,0:11:30.02:0,30,275
chr10	48626782	.	G	GCGCTCTCTCTCT	8197.63	PASS	AB=0.842;AC=25;AF=0.446;AN=56;BaseQRankSum=4.611;DP=667;FS=9.785;HRun=0;HaplotypeScore=230.3051;InbreedingCoeff=0.7678;MQ=68.94;MQ0=12;MQRankSum=-5.418;QD=24.25;ReadPosRankSum=-3.556;VQSLOD=1.6076;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:87.27:0,87,2630	0/0:5,0:5:15.05:0,15,439	0/0:30,0:17:43.95:0,44,853	0/0:39,0:23:33.54:0,34,580	1/1:35,0:35:49.31:431,49,0	0/0:18,0:18:39.07:0,39,1091	0/0:26,0:26:62.89:0,63,1479	0/1:45,0:41:99:963,0,272	0/0:28,0:29:74.05:0,74,2031	1/1:28,0:28:73.89:1528,74,0	0/1:20,0:19:49.61:152,0,50	0/0:16,0:16:48.14:0,48,1208	0/0:22,0:22:57.06:0,57,1488	1/1:5,1:21:9.03:489,9,0	0/0:29,0:29:78.25:0,78,2343	0/0:21,0:21:57.16:0,57,1652	1/1:6,11:24:17.27:751,17,0	1/1:6,0:6:14.94:387,15,0	1/1:7,0:18:52.57:603,53,0	1/1:5,0:27:8.76:75,9,0	0/1:2,0:20:6.83:174,0,7	0/0:18,0:18:51.17:0,51,1412	0/0:20,0:20:60.21:0,60,1782	0/0:17,0:17:48.16:0,48,1357	1/1:17,0:17:21.33:239,21,0	1/1:32,0:31:85.06:1636,85,0	1/1:20,0:20:34.58:419,35,0	1/1:6,13:19:11.56:351,12,0
chr10	48626786	.	GCTCT	G	1323.14	PASS	AB=0.576;AC=7;AF=0.125;AN=56;BaseQRankSum=-1.912;DP=657;FS=19.628;HRun=0;HaplotypeScore=141.5694;InbreedingCoeff=0.6545;MQ=64.44;MQ0=14;MQRankSum=4.544;QD=15.04;ReadPosRankSum=4.253;VQSLOD=1.5055;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:40:47.50:0,48,1365	0/0:5,0:5:9.03:0,9,193	0/0:28,0:13:3.01:0,3,72	0/0:39,0:22:11.99:0,12,166	0/0:40,0:37:19.74:0,20,292	1/1:8,9:17:18.06:289,18,0	1/1:14,8:24:21.06:317,21,0	0/0:47,0:43:64.31:0,64,887	1/1:9,18:28:48.15:727,48,0	0/0:29,0:29:66.19:0,66,1133	0/0:21,0:20:18.06:0,18,323	0/0:16,0:16:4.69:0,5,568	0/0:19,0:20:38.64:0,39,731	0/0:19,0:19:12:0,12,171	0/0:26,0:29:63.19:0,63,1338	0/1:5,3:19:75.76:136,0,76	0/0:15,0:15:14.81:0,15,173	0/0:7,0:7:11.93:0,12,147	0/0:23,0:21:45.14:0,45,738	0/0:24,0:24:5.94:0,6,42	0/0:17,0:17:14.26:0,14,230	0/0:19,0:19:30.08:0,30,626	0/0:19,0:22:50.63:0,51,1008	0/0:17,0:19:32.53:0,33,529	0/0:18,0:18:12.02:0,12,159	0/0:33,0:32:67.72:0,68,1007	0/0:16,0:21:17.95:0,18,219	0/0:18,0:16:6.02:0,6,91
chr10	48630198	.	CT	C	258.09	PASS	AB=0.933;AC=4;AF=0.071;AN=56;BaseQRankSum=4.709;DP=633;FS=0.000;HRun=13;HaplotypeScore=77.5172;InbreedingCoeff=0.4223;MQ=67.35;MQ0=1;MQRankSum=2.586;QD=3.07;ReadPosRankSum=-0.469;VQSLOD=-0.0911;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,2:44:54.18:0,54,900	0/0:8,0:8:15.02:0,15,146	0/0:23,0:17:13.44:0,13,115	0/1:26,2:20:7.87:8,0,158	0/0:23,1:25:29.86:0,30,410	0/0:9,0:9:18.03:0,18,175	0/1:26,2:28:4.64:5,0,426	1/1:9,19:28:27.61:349,28,0	0/0:25,1:26:28.03:0,28,534	0/0:29,0:32:62.89:0,63,576	0/0:23,0:24:54.01:0,54,489	0/0:27,1:28:34.28:0,34,512	0/0:8,0:10:17.79:0,18,142	0/0:19,1:22:28.76:0,29,390	0/0:26,1:27:41.16:0,41,547	0/0:21,2:23:26.14:0,26,409	0/0:26,0:26:73.84:0,74,650	0/0:18,2:21:1.05:0,1,301	0/0:24,0:26:56.67:0,57,490	0/0:23,1:23:9.36:0,9,346	0/0:24,0:24:48.80:0,49,440	0/0:10,0:12:17.80:0,18,142	0/0:19,0:19:42.49:0,42,387	0/0:23,0:24:56.92:0,57,535	0/0:16,0:17:29.85:0,30,261	0/0:19,0:19:42.03:0,42,391	0/0:26,1:26:44.10:0,44,559	0/0:8,0:8:24.03:0,24,228
chr10	48632081	.	CA	C	5319.74	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=13.411;DP=605;FS=6.316;HRun=8;HaplotypeScore=58.9027;InbreedingCoeff=0.9932;MQ=69.95;MQ0=4;MQRankSum=-3.490;QD=23.75;ReadPosRankSum=-1.429;VQSLOD=5.0590;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:37:99:0,102,1196	0/0:6,0:6:15.05:0,15,181	0/0:26,1:21:22.60:0,23,515	0/0:23,0:14:26.33:0,26,280	1/1:1,29:30:87.14:839,87,0	0/0:16,0:16:48.15:0,48,576	0/0:21,0:20:51.11:0,51,599	1/1:3,29:32:87.01:827,87,0	0/0:26,0:26:72.22:0,72,869	1/1:1,21:22:63.08:602,63,0	1/1:2,21:23:63.10:608,63,0	0/0:26,0:26:69.20:0,69,821	0/0:13,0:13:36.09:0,36,421	1/1:3,22:25:56.58:530,57,0	0/0:38,0:38:99:0,105,1255	0/0:24,0:24:72.22:0,72,870	1/1:2,14:16:13.16:269,13,0	1/1:1,16:17:30.05:290,30,0	0/0:17,0:16:42.13:0,42,507	0/0:21,0:21:57.65:0,58,689	0/0:21,0:21:60.18:0,60,725	0/0:13,0:13:36.10:0,36,424	0/0:10,0:10:30.09:0,30,362	0/0:13,0:13:36.10:0,36,423	1/1:3,16:19:42.07:406,42,0	1/1:4,21:25:63.06:601,63,0	0/0:28,0:28:78.24:0,78,941	1/1:0,15:15:36.06:348,36,0
chr10	48632497	.	GAAGCGC	G	1171.61	PASS	AC=2;AF=0.038;AN=52;BaseQRankSum=4.879;DP=357;FS=0.000;HRun=0;HaplotypeScore=77.9877;InbreedingCoeff=0.9587;MQ=49.27;MQ0=14;MQRankSum=-4.884;QD=55.79;ReadPosRankSum=-2.844;VQSLOD=2.5898;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:21:54.19:0,54,1889	0/0:6,0:6:18.06:0,18,635	./.	./.	0/0:15,0:15:36.12:0,36,1180	0/0:15,0:14:39.12:0,39,1291	0/0:14,0:10:30.06:0,30,898	1/1:2,19:20:57.18:1266,57,0	0/0:8,0:8:24.08:0,24,854	0/0:15,0:13:39.13:0,39,1231	0/0:22,0:22:60.21:0,60,1982	0/0:10,0:10:27.09:0,27,942	0/0:10,0:9:27.09:0,27,894	0/0:9,0:8:21.07:0,21,702	0/0:11,0:11:30.09:0,30,972	0/0:19,0:19:54.19:0,54,1821	0/0:18,0:18:42.14:0,42,1493	0/0:13,0:12:24.08:0,24,741	0/0:14,0:13:33.11:0,33,1153	0/0:10,0:10:24.08:0,24,852	0/0:9,0:8:18.04:0,18,558	0/0:7,0:7:18.06:0,18,631	0/0:9,0:9:21.07:0,21,726	0/0:16,0:16:42.14:0,42,1445	0/0:12,0:12:36.12:0,36,1244	0/0:22,0:22:54.17:0,54,1836	0/0:17,0:17:48.16:0,48,1462	0/0:10,0:10:27.03:0,27,632
chr10	48632550	.	AAG	A	249.02	PASS	AB=0.981;AC=20;AF=0.357;AN=56;BaseQRankSum=2.783;DP=525;FS=9.884;HRun=0;HaplotypeScore=76.8684;InbreedingCoeff=-0.3753;MQ=44.59;MQ0=45;MQRankSum=0.679;QD=0.63;ReadPosRankSum=0.739;VQSLOD=0.3415;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:23:13.34:0,13,208	0/1:7,0:6:0.01:0,0,94	0/1:72,0:7:16.30:16,0,73	0/1:68,0:12:0.96:1,0,47	0/1:17,0:17:11.50:12,0,125	0/1:11,1:12:21.07:21,0,65	0/1:16,0:15:19.04:19,0,43	0/1:17,1:15:20.80:21,0,138	0/0:9,0:9:1.81:0,2,89	0/0:20,1:20:6.60:0,7,156	0/0:20,0:20:4.66:0,5,191	0/1:9,1:10:0.78:55,0,1	0/0:13,0:13:11.08:0,11,192	0/0:8,0:7:9.70:0,10,70	0/0:13,0:13:1.65:0,2,100	0/1:17,0:17:7.58:8,0,127	0/1:29,1:27:22.95:23,0,94	0/1:19,2:18:40.03:40,0,161	0/1:21,0:21:82.87:83,0,94	0/1:17,0:17:9.83:10,0,152	1/1:2,0:2:2.92:17,3,0	0/1:10,0:10:7.36:7,0,100	0/1:6,0:6:9.14:9,0,44	0/0:11,0:11:13.46:0,13,80	0/1:17,0:16:20.80:21,0,74	0/1:21,0:20:3.94:4,0,210	0/1:16,0:16:26.74:27,0,56	0/0:5,1:5:8.85:0,9,56
chr10	48632610	.	T	TTG	109.04	PASS	AB=0.750;AC=1;AF=0.018;AN=56;BaseQRankSum=-1.138;DP=424;FS=11.484;HRun=0;HaplotypeScore=67.3438;InbreedingCoeff=-0.0218;MQ=82.41;MQ0=1;MQRankSum=0.118;QD=9.09;ReadPosRankSum=-3.249;VQSLOD=1.0333;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:75.24:0,75,1056	0/0:5,0:5:12.04:0,12,172	0/0:27,0:24:29.75:0,30,630	0/0:14,0:12:24.93:0,25,301	0/0:18,0:18:51.11:0,51,678	0/0:10,0:10:30.10:0,30,427	0/0:16,0:16:39.09:0,39,520	0/0:22,0:22:63.21:0,63,896	0/0:9,0:9:27.09:0,27,387	0/0:25,0:25:60.20:0,60,857	0/0:14,0:14:39.09:0,39,533	0/0:16,0:16:48.16:0,48,688	0/0:13,0:13:39.13:0,39,559	0/0:12,0:12:36.12:0,36,508	0/0:9,0:9:27.09:0,27,387	0/0:17,0:17:51.13:0,51,708	0/0:20,0:20:42.14:0,42,589	0/0:10,0:10:21.07:0,21,301	0/0:31,0:31:81.24:0,81,1105	0/0:10,0:10:30.10:0,30,430	0/0:4,0:4:9.03:0,9,129	0/0:8,0:8:24.08:0,24,344	0/0:15,0:15:45.15:0,45,645	0/0:9,0:9:24.08:0,24,343	0/0:16,0:16:39.13:0,39,540	0/0:21,0:21:63.21:0,63,902	0/0:14,0:14:39.13:0,39,559	0/1:8,4:12:99:183,0,301
chr10	48633620	.	C	CT	2676.71	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=-9.855;DP=626;FS=1.331;HRun=10;HaplotypeScore=69.5272;InbreedingCoeff=0.8793;MQ=77.09;MQ0=1;MQRankSum=-2.025;QD=20.43;ReadPosRankSum=0.045;VQSLOD=4.4457;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:59.90:0,60,493	0/0:10,0:10:13.10:0,13,205	0/0:19,0:19:8.48:0,8,250	0/0:24,0:22:37.42:0,37,270	0/0:32,0:33:73.87:0,74,591	0/0:19,0:19:44.47:0,44,369	0/0:14,0:14:38.92:0,39,315	0/0:37,0:37:94.48:0,94,746	0/0:23,0:23:62.86:0,63,511	0/0:24,0:24:53.91:0,54,443	0/0:16,0:16:41.94:0,42,345	0/0:23,0:23:50.89:0,51,416	0/0:17,0:17:44.91:0,45,366	0/0:14,0:15:40.96:0,41,323	0/0:37,0:38:99:0,104,843	0/0:19,0:19:56.92:0,57,467	0/0:25,0:25:65.90:0,66,541	0/0:18,0:19:52.95:0,53,423	1/1:5,21:26:41.48:630,41,0	1/1:2,26:28:22.91:605,23,0	1/1:3,26:29:66.17:704,66,0	0/1:9,0:9:4.17:4,0,148	0/0:13,0:13:32.91:0,33,264	0/0:21,0:21:61.96:0,62,498	0/0:21,0:21:47.91:0,48,393	0/0:28,1:29:45.90:0,46,581	1/1:7,32:39:84.21:896,84,0	0/0:9,0:9:26.01:0,26,203
chr10	48634571	.	ACACCC	A	8520.35	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=16.226;DP=755;FS=11.028;HRun=0;HaplotypeScore=140.5741;InbreedingCoeff=0.9990;MQ=90.74;MQ0=0;MQRankSum=-8.589;QD=48.69;ReadPosRankSum=1.444;VQSLOD=4.6878;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,160,4887	0/0:12,0:12:36.12:0,36,1140	0/0:26,0:26:75.26:0,75,2302	0/0:34,0:34:71.40:0,71,2292	1/1:3,16:19:35.99:732,36,0	0/0:22,0:22:60.19:0,60,1740	0/0:36,0:36:99:0,105,3253	0/0:49,0:49:99:0,132,4069	0/0:22,0:22:66.23:0,66,2049	1/1:0,29:29:84.29:1799,84,0	1/1:0,17:17:36.12:780,36,0	0/0:35,0:35:99:0,102,3106	0/0:18,0:18:54.19:0,54,1692	1/1:0,24:24:51.11:1060,51,0	0/0:44,0:44:99:0,123,3812	0/0:36,0:36:99:0,108,3363	1/1:4,17:21:36.06:734,36,0	1/1:0,20:20:60.14:1238,60,0	0/0:21,0:21:57.20:0,57,1701	0/0:18,0:18:54.19:0,54,1616	0/0:46,0:46:99:0,138,4002	0/0:26,0:26:72.23:0,72,2097	0/0:16,0:16:45.15:0,45,1426	0/0:38,0:38:99:0,111,3469	1/1:1,9:11:24.08:520,24,0	1/1:2,22:24:63.19:1203,63,0	0/0:27,0:27:81.25:0,81,2459	1/1:0,10:10:21.07:455,21,0
chr10	48636741	.	A	AAG	12372.05	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-3.613;DP=596;FS=6.011;HRun=0;HaplotypeScore=77.5225;InbreedingCoeff=0.9998;MQ=78.32;MQ0=0;MQRankSum=-1.639;QD=55.48;ReadPosRankSum=0.393;VQSLOD=4.6529;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:96.26:0,96,1428	0/0:18,0:18:54.12:0,54,814	0/0:12,0:12:29.93:0,30,455	0/0:17,0:17:39.13:0,39,570	1/1:0,32:33:96.26:1783,96,0	0/0:18,0:18:54.15:0,54,798	0/0:14,0:14:42.08:0,42,607	1/1:0,31:32:96.32:1831,96,0	0/0:19,0:19:54.17:0,54,820	1/1:0,25:26:78.20:1482,78,0	1/1:0,21:24:63.22:1224,63,0	0/0:20,0:20:57.16:0,57,826	0/0:22,0:22:66.19:0,66,964	1/1:0,13:13:39.13:777,39,0	0/0:37,0:37:99:0,111,1692	0/0:36,0:36:99:0,108,1687	1/1:0,26:27:78.27:1555,78,0	1/1:0,14:14:36.12:719,36,0	0/0:15,0:15:42.14:0,42,648	0/0:19,0:19:54.18:0,54,844	0/0:14,0:14:39.12:0,39,590	0/0:15,0:15:45.13:0,45,680	0/0:15,0:15:45.15:0,45,700	0/0:26,0:26:78.20:0,78,1146	1/1:0,17:17:45.15:899,45,0	1/1:0,23:24:72.23:1403,72,0	0/0:24,0:24:72.25:0,72,1124	1/1:0,12:13:36.12:699,36,0
chr10	48637240	.	T	TA	1028.02	PASS	AB=0.842;AC=9;AF=0.161;AN=56;BaseQRankSum=-2.883;DP=502;FS=3.380;HRun=13;HaplotypeScore=59.4282;InbreedingCoeff=0.5156;MQ=62.10;MQ0=8;MQRankSum=1.055;QD=7.24;ReadPosRankSum=-0.819;VQSLOD=2.2162;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:42:99:0,100,659	0/0:9,0:9:21.27:0,21,143	0/1:29,0:10:4.24:4,0,47	0/0:16,0:6:2.67:0,3,11	0/0:16,0:16:41.55:0,42,283	0/0:18,1:20:27.75:0,28,326	0/0:7,0:7:14.88:0,15,103	0/0:36,0:35:58.36:0,58,392	0/0:8,0:8:11.82:0,12,80	0/0:19,1:20:19.64:0,20,273	0/0:25,0:26:66.23:0,66,437	0/0:15,0:17:38.91:0,39,254	0/0:6,0:8:19.85:0,20,128	0/0:6,0:7:10.93:0,11,67	0/0:21,0:21:50.41:0,50,342	0/0:13,0:14:31.73:0,32,210	0/1:21,2:23:5.18:5,0,256	0/0:21,0:20:41.53:0,42,282	0/1:13,15:28:14.57:356,0,15	1/1:8,18:26:28.51:366,29,0	1/1:2,4:5:9:80,9,0	0/0:2,0:2:5.90:0,6,38	0/0:13,0:13:26.60:0,27,179	0/0:7,0:7:17.84:0,18,122	0/0:9,0:11:22.77:0,23,136	0/0:15,0:15:32.41:0,32,211	1/1:6,19:25:10.40:359,10,0	0/0:18,1:19:0.82:0,1,142
chr10	48638416	.	T	TTG	1714.88	PASS	AB=0.898;AC=23;AF=0.442;AN=52;BaseQRankSum=-2.551;DP=671;FS=1.990;HRun=0;HaplotypeScore=106.6080;InbreedingCoeff=-0.1144;MQ=66.05;MQ0=20;MQRankSum=-1.239;QD=4.16;ReadPosRankSum=-1.752;VQSLOD=2.2131;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:44,0:45:22.19:22,0,259	0/1:12,0:13:3.23:3,0,9	./.	./.	0/0:18,0:20:14.85:0,15,133	0/1:13,5:18:46.76:159,0,47	0/1:16,0:16:46.29:133,0,46	1/1:21,0:18:1.72:4,2,0	0/0:14,0:14:9.16:0,9,228	0/0:23,0:22:13.93:0,14,128	0/0:23,0:23:5.90:0,6,105	1/1:10,7:16:18.06:266,18,0	0/1:16,4:21:79.60:111,0,80	0/0:21,0:20:18.04:0,18,194	0/0:24,0:24:20.81:0,21,207	0/1:19,1:22:23.86:24,0,119	0/0:36,0:38:25.84:0,26,297	0/1:22,0:22:33.26:33,0,219	0/1:17,1:17:23.87:96,0,24	0/1:22,2:25:23.49:72,0,23	0/1:43,1:44:64.90:117,0,65	0/1:11,6:19:15.72:79,0,16	1/1:11,1:11:3.01:44,3,0	0/1:18,20:37:99:440,0,109	0/0:22,0:24:16.69:0,17,210	0/1:31,0:33:12.90:13,0,190	1/1:13,6:19:8.57:213,9,0	1/1:3,2:2:3.01:44,3,0
chr10	48638730	.	CA	C	4399.66	PASS	AB=0.940;AC=20;AF=0.370;AN=54;BaseQRankSum=5.796;DP=631;FS=5.132;HRun=11;HaplotypeScore=76.2510;InbreedingCoeff=0.8213;MQ=66.14;MQ0=1;MQRankSum=-1.782;QD=16.79;ReadPosRankSum=-0.061;VQSLOD=5.5954;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:33:81:0,81,828	0/0:8,0:8:24.06:0,24,256	0/1:19,3:19:84.77:85,0,185	0/1:15,0:14:31.05:31,0,32	1/1:3,13:18:43.03:332,43,0	0/0:20,0:20:45.11:0,45,473	0/0:19,1:20:51.12:0,51,536	1/1:5,29:34:80.85:659,81,0	0/0:24,0:24:63.14:0,63,659	1/1:2,25:27:74.88:612,75,0	1/1:6,15:21:38.92:320,39,0	0/0:28,0:28:60.13:0,60,629	0/0:19,0:19:42.09:0,42,441	1/1:3,20:23:56.93:468,57,0	0/0:32,0:32:81.17:0,81,843	0/0:27,0:27:63.15:0,63,665	1/1:3,25:28:62.92:517,63,0	1/1:3,18:21:21.93:386,22,0	0/0:6,0:11:23.13:0,23,135	0/0:6,0:35:85.90:0,86,462	0/0:3,0:19:45.45:0,45,228	0/0:20,0:22:53.96:0,54,552	0/0:21,0:21:54.12:0,54,562	0/0:21,2:23:4.84:0,5,456	1/1:2,24:28:63.99:504,64,0	1/1:3,22:25:33.94:485,34,0	0/0:7,0:23:51.68:0,52,285	./.
chr10	48639356	.	C	CTTTCT	23216.46	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-15.389;DP=808;FS=17.067;HRun=0;HaplotypeScore=131.9406;InbreedingCoeff=0.9975;MQ=70.88;MQ0=0;MQRankSum=-4.139;QD=54.24;ReadPosRankSum=0.687;VQSLOD=4.3276;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:85.78:0,86,1658	0/0:17,0:17:48.16:0,48,934	0/0:21,0:21:45.15:0,45,809	0/0:21,0:21:19.29:0,19,378	1/1:4,26:31:66.22:1806,66,0	0/0:21,0:21:54.17:0,54,1001	0/0:24,0:24:60.18:0,60,1095	1/1:25,12:49:69.11:1588,69,0	0/0:25,0:25:66.15:0,66,1177	1/1:7,29:37:90.31:2516,90,0	1/1:4,19:24:57.19:1568,57,0	0/0:28,0:28:72.22:0,72,1329	0/0:25,0:25:69.22:0,69,1308	1/1:3,28:39:63.22:1851,63,0	0/0:32,0:32:84.27:0,84,1603	0/0:34,0:34:90.29:0,90,1720	1/1:8,21:32:45.15:1323,45,0	1/1:5,7:14:18.06:529,18,0	1/1:6,16:22:57.18:1502,57,0	1/1:4,31:35:90.31:2551,90,0	1/1:4,23:33:60.21:1751,60,0	0/0:34,0:34:84.27:0,84,1573	0/0:31,0:31:63.14:0,63,1057	0/0:32,0:32:75.18:0,75,1388	1/1:10,14:24:39.13:1146,39,0	1/1:4,30:35:93.29:2606,93,0	1/1:8,25:36:66.06:1863,66,0	1/1:6,7:14:21.07:617,21,0
chr10	48639785	.	GA	G	1549.31	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=6.422;DP=611;FS=3.301;HRun=11;HaplotypeScore=67.5136;InbreedingCoeff=0.9342;MQ=74.88;MQ0=1;MQRankSum=1.179;QD=16.14;ReadPosRankSum=3.208;VQSLOD=4.6841;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,2:29:28.88:0,29,703	0/0:9,1:10:5.43:0,5,261	0/0:16,0:16:4.04:0,4,77	0/0:7,1:8:15:0,15,146	0/0:31,1:35:53.33:0,53,732	0/0:28,1:29:50.54:0,51,737	0/0:17,1:19:26.34:0,26,462	0/0:37,0:37:90.19:0,90,947	0/0:22,0:22:63.14:0,63,664	0/0:23,0:23:48.10:0,48,502	0/0:25,1:27:54.12:0,54,563	1/1:2,13:15:38.95:320,39,0	1/1:4,18:22:53.87:437,54,0	0/0:14,0:15:32.92:0,33,334	0/0:43,0:43:99:0,114,1195	0/0:23,1:24:38.52:0,39,596	0/0:28,0:28:46.03:0,46,644	0/0:9,0:9:24.04:0,24,246	0/0:6,0:18:38.81:0,39,207	0/0:2,0:21:54.76:0,55,303	0/0:1,0:14:22.76:0,23,114	1/1:3,15:18:44.93:369,45,0	1/1:11,15:27:18.93:301,19,0	1/1:2,12:14:35.96:296,36,0	0/0:25,1:26:44.52:0,45,673	0/0:21,0:22:47.95:0,48,489	0/0:2,0:22:51.32:0,51,261	0/0:15,0:16:44.88:0,45,433
chr10	48640623	.	G	GCCCCCTGGAAGAGTTTTATACAGT	2334.18	PASS	AB=0.750;AC=15;AF=0.938;AN=16;BaseQRankSum=-1.473;DP=43;FS=3.132;HRun=0;HaplotypeScore=40.7173;MQ=153.30;MQ0=0;MQRankSum=-1.255;QD=75.30;ReadPosRankSum=-0.164;VQSLOD=2.5585;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	./.	1/1:5,1:9:1.44:1157,1,0	0/1:4,0:6:27.28:322,0,27	./.	./.	./.	1/1:4,0:4:6.48:101,6,0	1/1:6,0:6:12.04:273,12,0	./.	./.	1/1:1,0:1:3.01:91,3,0	./.	./.	./.	./.	./.	./.	1/1:2,0:2:6.02:225,6,0	./.	./.	./.	./.	./.	1/1:2,0:2:6.02:150,6,0	./.	1/1:1,0:1:3.01:92,3,0	./.
chr10	48643846	.	C	CA	330.65	PASS	AB=0.982;AC=33;AF=0.589;AN=56;BaseQRankSum=-0.238;DP=422;FS=6.021;HRun=16;HaplotypeScore=118.3887;InbreedingCoeff=0.0552;MQ=52.24;MQ0=11;MQRankSum=-1.679;QD=1.01;ReadPosRankSum=-1.674;VQSLOD=-0.1311;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:21,0:21:18.86:19,0,27	1/1:5,0:4:1.03:19,1,0	0/0:19,0:4:4.89:0,5,23	0/1:30,1:7:3.56:4,0,4	0/1:15,0:14:4.98:12,0,5	1/1:8,1:9:4.60:38,5,0	0/1:16,0:16:11.45:11,0,24	0/1:30,0:28:13.66:29,0,14	0/0:7,0:7:3:0,3,9	1/1:8,0:8:4.35:26,4,0	1/1:18,0:18:1.47:20,1,0	1/1:15,0:15:12.36:85,12,0	0/1:12,1:13:8.23:21,0,8	1/1:15,0:15:0.47:1,0,0	1/1:11,0:11:6.58:18,7,0	0/1:16,1:17:5.49:21,0,5	0/0:15,0:15:0.12:0,0,23	1/1:19,0:18:0.75:19,1,0	1/1:9,0:8:1.72:5,2,0	1/1:15,0:15:1.65:8,2,0	0/0:8,0:8:0.76:0,1,8	1/1:14,1:15:8.16:47,8,0	0/1:17,0:17:5.42:20,0,5	1/1:9,0:9:5.87:38,6,0	0/0:16,1:17:0.75:0,1,19	0/0:14,0:13:3.51:0,4,32	0/0:15,0:15:6.84:0,7,31	0/1:18,0:16:1.22:10,0,1
chr10	48643861	.	AAC	A	4604.43	PASS	AB=1.000;AC=52;AF=0.929;AN=56;BaseQRankSum=-9.352;DP=522;FS=7.771;HRun=0;HaplotypeScore=83.7480;InbreedingCoeff=-0.0811;MQ=67.57;MQ0=8;MQRankSum=-1.469;QD=8.82;ReadPosRankSum=-7.397;VQSLOD=1.4253;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:26:21.04:266,21,0	1/1:8,1:9:23.27:195,23,0	0/1:52,0:14:9.64:10,0,83	0/1:58,0:21:59.69:60,0,132	1/1:19,0:19:26.28:224,26,0	1/1:12,1:13:8.05:136,8,0	1/1:12,2:14:3.21:199,3,0	0/1:30,0:29:5.99:185,0,6	1/1:9,0:9:14.47:192,14,0	1/1:9,0:9:24.10:178,24,0	1/1:6,10:16:24.47:161,24,0	1/1:18,0:18:3.76:107,4,0	1/1:14,0:14:0.37:59,0,0	1/1:16,0:16:7.33:169,7,0	1/1:10,0:10:10.38:102,10,0	1/1:14,1:15:14.53:162,15,0	1/1:22,0:22:27.83:271,28,0	1/1:17,1:17:12.83:106,13,0	1/1:13,0:12:22.89:184,23,0	1/1:17,1:18:15.15:250,15,0	1/1:6,0:6:5.43:43,5,0	1/1:12,0:12:2.98:64,3,0	1/1:15,0:15:19.45:173,19,0	0/1:9,0:9:5.49:37,0,5	1/1:23,0:23:30.45:285,30,0	1/1:23,0:23:28.57:367,29,0	1/1:21,0:21:20.47:275,20,0	1/1:14,0:14:18.67:146,19,0
chr10	48643862	.	AC	A	7163.56	PASS	AB=0.982;AC=54;AF=0.964;AN=56;BaseQRankSum=-6.397;DP=520;FS=14.261;HRun=1;HaplotypeScore=68.9614;InbreedingCoeff=0.0363;MQ=67.83;MQ0=8;MQRankSum=-4.257;QD=13.78;ReadPosRankSum=1.143;VQSLOD=2.6399;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:22,2:24:61.71:439,62,0	1/1:9,0:9:25.15:198,25,0	0/1:51,1:14:10.59:11,0,76	0/1:57,1:21:63.34:63,0,107	1/1:19,1:20:43.41:328,43,0	1/1:13,0:13:32.32:226,32,0	1/1:13,2:15:36.38:255,36,0	1/1:29,2:30:63.89:396,64,0	1/1:8,1:9:25.55:212,26,0	1/1:10,0:10:28.49:232,28,0	1/1:15,0:15:32.40:207,32,0	1/1:18,0:18:38.84:257,39,0	1/1:12,1:13:27.98:169,28,0	1/1:14,2:16:35.09:247,35,0	1/1:7,2:9:21.36:199,21,0	1/1:14,1:15:38.37:275,38,0	1/1:20,2:22:54.52:436,55,0	1/1:14,4:17:29.92:189,30,0	1/1:11,1:11:29.45:215,29,0	1/1:17,2:19:49.79:395,50,0	1/1:7,0:7:12.39:76,12,0	1/1:11,1:12:30:207,30,0	1/1:13,1:14:37.78:232,38,0	1/1:9,0:9:16.69:88,17,0	1/1:20,3:23:56.74:423,57,0	1/1:22,1:23:60.40:483,60,0	1/1:17,3:20:50.23:384,50,0	1/1:12,2:14:39.69:323,40,0
chr10	48644623	.	AG	A	2986.89	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=4.670;DP=490;FS=11.510;HRun=4;HaplotypeScore=68.9795;InbreedingCoeff=0.9848;MQ=68.36;MQ0=9;MQRankSum=-0.135;QD=16.78;ReadPosRankSum=2.733;VQSLOD=2.3152;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:51.55:0,52,661	0/0:10,0:9:20.58:0,21,213	0/0:40,0:16:41.71:0,42,351	0/0:27,0:10:20.49:0,20,129	1/1:24,0:22:50.55:386,51,0	0/0:11,0:11:22.53:0,23,189	0/0:8,0:8:23.97:0,24,232	0/0:39,0:38:82.84:0,83,813	0/0:9,0:9:19.06:0,19,183	1/1:29,1:30:78.72:708,79,0	1/1:11,1:12:28.88:226,29,0	0/0:11,0:11:27.01:0,27,270	0/0:16,0:15:27:0,27,256	1/1:11,0:11:27.01:246,27,0	0/0:18,0:17:44.59:0,45,413	0/0:11,0:11:21.27:0,21,147	1/1:27,0:26:38.99:345,39,0	1/1:13,1:13:33.01:306,33,0	0/0:7,0:7:20.11:0,20,147	0/0:21,0:21:48.21:0,48,307	0/0:14,0:14:11.15:0,11,194	0/0:8,0:7:14.71:0,15,159	0/0:11,0:10:23.61:0,24,260	0/0:10,0:10:21.05:0,21,250	1/1:23,1:23:30.02:283,30,0	1/1:23,1:22:49.85:418,50,0	0/0:15,0:14:24.14:0,24,158	1/1:11,1:11:30.03:284,30,0
chr10	48644626	.	GGT	G	4225.87	PASS	AB=0.933;AC=19;AF=0.339;AN=56;BaseQRankSum=3.248;DP=498;FS=4.933;HRun=0;HaplotypeScore=68.2004;InbreedingCoeff=0.8792;MQ=67.21;MQ0=15;MQRankSum=0.381;QD=21.34;ReadPosRankSum=3.607;VQSLOD=5.0596;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:67.14:0,67,961	0/0:10,0:9:20.80:0,21,307	0/0:41,0:16:42.40:0,42,433	0/0:27,0:10:20.66:0,21,147	1/1:1,21:21:50.38:491,50,0	0/0:11,0:11:14.65:0,15,255	0/0:9,0:9:23.97:0,24,277	0/0:39,0:38:73.86:0,74,1025	0/0:9,0:9:11.43:0,11,262	1/1:18,11:32:82.41:913,82,0	1/1:2,10:12:21.70:329,22,0	0/0:12,0:12:22.84:0,23,337	0/0:15,0:13:27.51:0,28,351	1/1:8,3:12:26.91:279,27,0	0/0:18,0:17:47.94:0,48,560	0/0:11,0:11:29.55:0,30,274	1/1:1,23:25:39.13:549,39,0	1/1:10,3:13:32.10:320,32,0	0/0:7,0:7:5:0,5,80	0/0:21,0:21:12.37:0,12,138	0/1:13,1:14:14.17:14,0,137	0/0:8,0:7:17.98:0,18,256	0/0:10,0:9:27.05:0,27,405	0/0:10,0:10:21.05:0,21,341	1/1:2,20:23:29.76:387,30,0	1/1:5,17:23:32.51:546,33,0	0/0:14,0:13:9.06:0,9,109	1/1:3,9:11:29.77:399,30,0
chr10	48644627	.	GTT	G	1659.15	PASS	AB=1.000;AC=22;AF=0.393;AN=56;BaseQRankSum=7.274;DP=509;FS=2.805;HRun=17;HaplotypeScore=77.2557;InbreedingCoeff=0.6333;MQ=66.31;MQ0=18;MQRankSum=2.155;QD=6.80;ReadPosRankSum=5.889;VQSLOD=0.0971;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:27:59.09:0,59,604	0/0:9,0:9:17.40:0,17,184	0/0:41,0:16:18.26:0,18,154	0/0:27,0:10:11.01:0,11,80	1/1:22,1:21:7.67:122,8,0	0/0:10,0:10:11.73:0,12,134	0/0:9,0:8:12.04:0,12,149	0/0:27,0:40:61.74:0,62,589	0/0:8,2:10:1.37:0,1,194	1/1:31,0:31:9.53:247,10,0	0/1:13,0:12:4.12:123,0,4	0/0:12,0:13:19.26:0,19,202	0/0:16,0:14:18.45:0,18,195	0/1:12,0:12:24.13:35,0,24	0/0:18,0:19:28.09:0,28,291	0/0:8,0:11:22.70:0,23,195	1/1:28,0:27:22.61:242,23,0	0/1:17,0:13:9.74:76,0,10	1/1:3,4:7:11.86:95,12,0	1/1:7,13:21:20.97:248,21,0	1/1:8,5:14:12.03:120,12,0	0/0:9,0:8:20.49:0,20,201	0/0:10,0:9:23.44:0,23,274	0/0:5,0:10:18.04:0,18,199	1/1:24,0:23:14.20:152,14,0	0/1:26,0:23:32.82:164,0,33	1/1:5,9:13:7.48:68,7,0	1/1:13,0:11:14.38:167,14,0
chr10	48646741	.	GGTGTGT	G	2414.05	PASS	AB=0.907;AC=19;AF=0.365;AN=52;BaseQRankSum=4.912;DP=619;FS=6.151;HRun=0;HaplotypeScore=145.9336;InbreedingCoeff=0.5055;MQ=59.97;MQ0=17;MQRankSum=-6.930;QD=8.91;ReadPosRankSum=1.522;VQSLOD=2.4456;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:40:57.18:0,57,1306	0/0:4,0:5:9.03:0,9,204	./.	./.	0/0:20,0:23:17.19:0,17,245	0/0:22,0:20:36.12:0,36,983	0/1:18,0:20:33.82:34,0,561	0/1:27,0:27:27.74:28,0,34	0/0:11,0:11:9.03:0,9,163	0/0:24,0:24:28.73:0,29,381	0/0:24,0:24:18.04:0,18,269	1/1:9,12:22:29.57:588,30,0	1/1:15,5:21:22.56:427,23,0	0/0:16,0:16:24.01:0,24,250	0/0:17,0:19:38.28:0,38,1026	0/0:21,0:25:32.72:0,33,947	0/0:13,0:23:23.67:0,24,348	0/1:11,0:21:39.98:40,0,251	0/1:17,1:18:70.98:126,0,71	1/1:15,9:26:18.53:308,19,0	0/1:24,0:23:47.04:73,0,47	1/1:20,6:28:8.56:163,9,0	1/1:6,7:12:9.03:182,9,0	1/1:12,7:19:6.49:122,6,0	0/0:14,0:16:14.18:0,14,189	0/0:22,0:30:26.23:0,26,381	1/1:21,9:31:27:509,27,0	0/0:6,0:10:5.16:0,5,77
chr10	48646782	.	GTGTGTC	G	1345.81	PASS	AB=0.981;AC=11;AF=0.196;AN=56;BaseQRankSum=8.205;DP=546;FS=1.743;HRun=0;HaplotypeScore=138.8449;InbreedingCoeff=0.1275;MQ=55.96;MQ0=13;MQRankSum=-8.548;QD=8.63;ReadPosRankSum=1.365;VQSLOD=2.6236;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:87.04:0,87,1740	0/0:7,0:7:20.99:0,21,308	0/0:23,0:10:23.63:0,24,194	0/0:27,0:13:24.87:0,25,252	0/0:19,0:18:41.34:0,41,404	0/0:21,0:20:54.11:0,54,1334	0/0:21,0:21:2.22:0,2,816	0/0:26,0:26:40:0,40,493	0/0:8,0:8:12.01:0,12,146	0/0:23,0:23:58.27:0,58,632	0/0:16,0:16:16.94:0,17,284	0/1:18,1:19:58.25:401,0,58	0/1:20,0:20:99:268,0,188	0/0:12,0:12:29.94:0,30,324	0/0:24,0:23:59.16:0,59,1377	0/0:23,0:23:63.41:0,63,1398	0/0:25,0:25:10.71:0,11,589	0/1:19,1:20:6.57:7,0,505	0/1:11,0:11:75.15:75,0,156	1/1:14,0:13:8.43:181,8,0	0/0:22,0:21:6.33:0,6,315	0/1:24,1:25:64.07:64,0,274	0/1:15,0:15:99:100,0,141	1/1:13,1:13:6.96:89,7,0	0/0:21,0:20:52.65:0,53,548	0/0:25,0:24:65.50:0,65,781	0/1:18,0:18:53.31:310,0,53	0/0:12,0:12:26.78:0,27,254
chr10	48648176	.	TAC	T	4717.73	PASS	AB=0.873;AC=30;AF=0.536;AN=56;BaseQRankSum=11.144;DP=690;FS=6.382;HRun=0;HaplotypeScore=91.6851;InbreedingCoeff=0.7723;MQ=61.15;MQ0=5;MQRankSum=0.278;QD=12.16;ReadPosRankSum=2.196;VQSLOD=3.9863;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:54.16:0,54,802	0/0:15,0:15:24.08:0,24,361	0/0:27,0:14:9.50:0,10,138	0/0:34,0:13:3.01:0,3,42	1/1:14,17:31:33.09:374,33,0	0/1:22,4:27:51.43:51,0,548	0/0:34,1:35:23.02:0,23,779	1/1:19,0:35:39.58:192,40,0	0/0:22,0:22:7.43:0,7,494	1/1:13,14:29:41.73:413,42,0	1/1:6,12:18:18.05:205,18,0	0/0:19,0:19:30.09:0,30,438	0/0:22,0:22:53.82:0,54,757	1/1:9,12:22:29.91:322,30,0	0/0:21,1:22:6.39:0,6,686	0/0:39,0:39:55.58:0,56,1095	1/1:15,13:28:24.07:274,24,0	1/1:6,14:20:36.10:410,36,0	1/1:11,2:13:5.15:67,5,0	1/1:7,10:19:29.75:301,30,0	1/1:16,28:45:63.01:698,63,0	0/0:10,0:10:8.96:0,9,108	0/0:20,0:21:39.11:0,39,550	0/1:18,3:21:26.27:26,0,487	1/1:4,20:25:47.97:526,48,0	1/1:10,10:22:32.74:323,33,0	1/1:9,14:24:32.76:336,33,0	1/1:0,6:8:20.72:199,21,0
chr10	48648450	.	TTAA	T	5623.72	PASS	AB=0.932;AC=22;AF=0.407;AN=54;BaseQRankSum=12.882;DP=464;FS=17.217;HRun=0;HaplotypeScore=66.4632;InbreedingCoeff=0.8015;MQ=71.00;MQ0=0;MQRankSum=-0.829;QD=22.41;ReadPosRankSum=1.528;VQSLOD=3.3089;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:57.20:0,57,1158	0/0:9,0:9:27.09:0,27,538	0/0:8,0:7:2.99:0,3,23	./.	1/1:5,22:27:57.19:816,57,0	0/1:25,2:27:10.66:11,0,1292	0/0:14,0:14:30.10:0,30,610	1/1:13,15:28:45.08:554,45,0	0/0:18,0:18:21.06:0,21,379	1/1:5,22:27:66.19:924,66,0	1/1:6,14:20:33.11:473,33,0	0/0:18,0:18:48.16:0,48,956	0/0:24,1:25:20.26:0,20,1153	1/1:4,9:14:24.05:322,24,0	0/0:17,0:17:36.12:0,36,731	0/0:16,0:16:45.15:0,45,908	1/1:5,14:19:36.12:515,36,0	1/1:3,13:17:39.10:536,39,0	0/1:13,1:14:12.88:13,0,452	0/0:14,0:14:39.13:0,39,779	0/0:14,0:14:33.11:0,33,669	0/0:3,0:3:6.02:0,6,122	0/0:13,0:13:30.10:0,30,610	0/0:4,0:4:9.03:0,9,183	1/1:6,12:18:27.09:387,27,0	1/1:11,22:33:66.19:902,66,0	0/0:11,0:10:33.11:0,33,670	1/1:3,4:7:12.04:172,12,0
chr10	48648684	.	G	GAA	5975.28	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=-6.682;DP=593;FS=0.349;HRun=11;HaplotypeScore=75.0564;InbreedingCoeff=0.9123;MQ=73.97;MQ0=2;MQRankSum=1.569;QD=25.43;ReadPosRankSum=-1.187;VQSLOD=4.5312;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:36:44.70:0,45,632	0/0:7,0:7:20.63:0,21,184	0/0:21,0:15:23.67:0,24,223	0/1:21,0:19:40.31:40,0,100	1/1:5,11:18:35.96:398,36,0	0/0:18,0:19:44.69:0,45,413	0/0:19,0:19:48.02:0,48,460	1/1:2,22:24:66.17:885,66,0	0/0:15,0:15:15.79:0,16,326	1/1:12,9:22:43.68:564,44,0	1/1:7,15:24:49.58:605,50,0	0/0:28,0:28:69.03:0,69,669	0/0:18,0:20:11.61:0,12,324	1/1:1,18:20:35.61:487,36,0	0/0:25,0:25:57.84:0,58,569	0/0:28,0:30:56.86:0,57,646	1/1:3,22:27:62.69:862,63,0	1/1:3,18:24:45.84:587,46,0	0/0:21,0:23:38.62:0,39,457	0/0:16,0:17:36:0,36,386	0/0:24,0:24:42.54:0,43,390	0/0:16,0:16:48.08:0,48,465	0/0:11,0:13:17.26:0,17,247	0/0:15,0:16:35.93:0,36,383	1/1:3,17:22:45.15:652,45,0	1/1:9,12:23:55.16:694,55,0	0/0:25,0:27:53.89:0,54,612	1/1:3,5:9:15.05:202,15,0
chr10	48652418	.	A	AC	10214.71	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-15.327;DP=713;FS=5.862;HRun=3;HaplotypeScore=90.0584;InbreedingCoeff=0.9999;MQ=90.83;MQ0=0;MQRankSum=-3.027;QD=38.11;ReadPosRankSum=3.601;VQSLOD=4.7974;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,29:29:87.21:1192,87,0	1/1:1,10:11:33.11:457,33,0	0/0:29,0:29:72.07:0,72,806	0/0:28,0:28:74.49:0,74,754	0/0:25,0:25:75.23:0,75,899	1/1:1,23:24:66.22:924,66,0	1/1:4,26:30:72.24:1008,72,0	0/0:21,0:21:57.10:0,57,650	1/1:0,21:21:63.21:882,63,0	0/0:27,0:27:78.24:0,78,936	0/0:25,0:25:75.22:0,75,888	0/0:30,0:30:90.27:0,90,1070	0/0:27,0:27:81.25:0,81,966	0/0:30,0:30:84.26:0,84,1008	1/1:2,31:33:93.31:1302,93,0	1/1:0,29:29:81.27:1134,81,0	0/0:29,0:29:84.18:0,84,978	0/0:19,0:19:51.12:0,51,587	1/1:2,11:13:33.11:462,33,0	1/1:0,23:23:66.22:923,66,0	1/1:4,27:31:75.25:1050,75,0	0/0:30,0:30:87.25:0,87,1030	0/0:26,0:26:78.24:0,78,936	0/0:42,0:42:99:0,126,1511	0/0:18,0:18:54.17:0,54,648	0/0:26,0:26:78.24:0,78,935	1/1:0,23:23:63.21:882,63,0	0/0:13,0:13:39.12:0,39,468
chr10	48653351	.	T	TTCTC	1915.65	PASS	AB=0.921;AC=42;AF=0.778;AN=54;BaseQRankSum=-2.505;DP=511;FS=0.000;HRun=0;HaplotypeScore=114.6899;InbreedingCoeff=0.2161;MQ=55.71;MQ0=18;MQRankSum=0.068;QD=4.09;ReadPosRankSum=-0.289;VQSLOD=1.4397;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:11,10:23:36.90:71,0,37	1/1:7,0:7:9:100,9,0	0/1:20,0:9:0:0,0,0	0/0:15,0:7:2.39:0,2,13	1/1:20,0:19:5.14:49,5,0	0/1:10,6:16:41.83:66,0,42	1/1:8,6:16:2.74:12,3,0	1/1:36,0:32:24.84:278,25,0	1/1:9,6:18:14.78:228,15,0	1/1:16,0:15:0.99:108,1,0	0/1:17,0:14:0.23:129,0,0	1/1:15,0:14:2.65:6,3,0	1/1:19,0:15:9.75:82,10,0	0/1:15,0:13:0:0,0,0	1/1:9,9:21:5.69:74,6,0	1/1:8,5:19:14.57:217,15,0	1/1:18,0:16:7.50:114,8,0	0/0:8,0:7:5.17:0,5,22	1/1:16,0:14:9.91:98,10,0	0/1:22,0:21:0:0,0,0	0/1:17,0:16:0:0,0,0	1/1:18,0:16:8.96:101,9,0	./.	1/1:17,0:15:3.01:36,3,0	0/1:16,0:13:9.12:22,0,9	1/1:18,0:17:19.10:99,19,0	1/1:21,0:20:14.60:137,15,0	1/1:25,0:21:2.04:6,2,0
chr10	48653381	.	CCCCCT	C	1105.59	PASS	AB=0.906;AC=19;AF=0.339;AN=56;BaseQRankSum=4.835;DP=460;FS=18.151;HRun=0;HaplotypeScore=104.4028;InbreedingCoeff=0.1326;MQ=40.19;MQ0=37;MQRankSum=-4.604;QD=5.29;ReadPosRankSum=0.907;VQSLOD=0.5413;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:14:25.85:0,26,502	0/0:7,0:7:14.86:0,15,293	0/0:21,0:1:0:0,0,0	0/0:25,0:5:2.69:0,3,8	0/1:16,6:20:12.64:13,0,18	0/0:17,0:15:28.80:0,29,631	0/0:15,0:13:15.05:0,15,394	0/0:29,0:24:51.79:0,52,1271	0/0:10,0:10:21.41:0,21,474	0/1:10,4:13:58.67:278,0,59	0/0:15,1:12:6.39:0,6,56	0/1:16,0:14:3.12:31,0,3	0/1:20,0:15:3.01:72,0,3	1/1:8,3:8:4.76:40,5,0	0/0:18,0:18:4.12:0,4,166	0/0:16,0:16:27.43:0,27,617	0/1:13,0:10:67.37:67,0,96	0/1:7,0:5:18.60:19,0,49	0/0:18,0:14:3.46:0,3,127	0/0:23,0:22:10.70:0,11,80	1/1:9,0:6:0.89:2,1,0	1/1:14,0:11:7.28:45,7,0	0/0:17,0:16:3.35:0,3,17	1/1:13,0:8:1.76:19,2,0	0/1:11,5:13:53:57,0,53	0/1:15,4:18:93.20:273,0,93	0/1:23,0:21:24.36:24,0,95	1/1:7,5:9:16.70:324,17,0
chr10	48653383	.	CCCT	C	1344.96	PASS	AB=0.996;AC=26;AF=0.464;AN=56;BaseQRankSum=5.655;DP=461;FS=7.146;HRun=0;HaplotypeScore=102.6136;InbreedingCoeff=0.1627;MQ=39.44;MQ0=32;MQRankSum=-3.584;QD=4.54;ReadPosRankSum=-2.444;VQSLOD=1.1695;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:14:22.42:0,22,311	0/0:5,0:5:13.12:0,13,199	0/1:18,0:2:0:0,0,0	0/0:29,0:4:3.28:0,3,10	0/1:23,0:22:18.80:19,0,33	0/0:14,0:12:27.05:0,27,413	0/0:16,0:14:17.99:0,18,293	0/0:28,0:24:58.40:0,58,945	0/0:9,0:9:20.55:0,21,375	0/1:14,0:13:88.51:194,0,89	0/0:13,0:11:2.93:0,3,41	1/1:14,3:15:13.43:159,13,0	1/1:21,0:16:27.01:304,27,0	1/1:13,0:10:11.37:68,11,0	0/0:16,0:16:14.86:0,15,148	0/0:16,0:16:24.52:0,25,443	0/1:12,0:9:48.70:49,0,92	0/1:7,0:5:12.51:13,0,52	0/1:19,0:14:19.38:82,0,19	0/1:22,0:21:12.94:13,0,16	1/1:9,0:6:0.89:2,1,0	1/1:13,0:10:0.29:10,0,0	1/1:18,1:18:2.94:23,3,0	1/1:12,0:7:2.27:8,2,0	0/1:17,0:14:49.44:76,0,49	0/1:21,0:20:99:169,0,126	0/1:24,0:22:49.59:50,0,50	1/1:14,0:12:19.42:278,19,0
chr10	48653427	.	A	ATC	3170.04	PASS	AB=0.994;AC=28;AF=0.560;AN=50;BaseQRankSum=9.442;DP=480;FS=0.000;HRun=0;HaplotypeScore=89.0099;InbreedingCoeff=0.6308;MQ=42.70;MQ0=29;MQRankSum=-8.046;QD=10.75;ReadPosRankSum=3.145;VQSLOD=3.0703;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:21.05:0,21,272	0/0:8,0:8:21.05:0,21,256	0/1:30,0:5:10.97:11,0,31	0/1:81,0:10:4.16:4,0,36	1/1:7,15:20:3.01:51,3,0	0/0:15,0:15:45.13:0,45,559	0/0:15,0:15:36.12:0,36,468	0/0:49,0:45:80.46:0,80,1022	0/0:5,0:5:1.42:0,1,101	1/1:8,8:15:35.90:536,36,0	0/0:5,6:11:0:0,0,0	1/1:5,9:14:2.94:36,3,0	1/1:10,7:17:27.09:399,27,0	1/1:5,4:7:3.01:51,3,0	0/0:11,0:10:27.08:0,27,342	0/0:21,0:21:48.14:0,48,598	1/1:4,3:7:3.01:37,3,0	1/1:2,3:5:6.02:102,6,0	1/1:8,5:11:23.93:335,24,0	1/1:5,13:18:9.03:153,9,0	./.	./.	1/1:3,11:13:9.03:150,9,0	./.	0/0:4,13:17:0:0,0,0	1/1:6,14:20:42.12:673,42,0	1/1:5,5:10:18.06:257,18,0	1/1:6,12:18:37.04:550,37,0
chr10	48653433	.	CTCTG	C	86.34	PASS	AB=0.960;AC=14;AF=0.259;AN=54;BaseQRankSum=3.354;DP=482;FS=15.119;HRun=0;HaplotypeScore=102.0519;InbreedingCoeff=0.2056;MQ=42.05;MQ0=33;MQRankSum=-1.158;QD=0.33;ReadPosRankSum=-3.543;VQSLOD=0.1565;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:21.07:0,21,531	0/0:7,0:7:21.07:0,21,522	0/1:32,0:4:11.75:12,0,65	0/1:81,0:10:4.66:5,0,131	1/1:25,0:23:3:27,3,0	0/0:17,0:17:51.16:0,51,1179	0/0:15,0:15:39.12:0,39,989	0/0:45,0:40:91.76:0,92,2061	0/0:6,0:6:15.05:0,15,335	0/1:17,1:17:27.07:27,0,381	0/1:11,2:13:0:0,0,0	0/0:12,0:12:2.10:0,2,7	0/1:16,1:17:25.75:26,0,138	0/0:9,0:7:5.64:0,6,38	0/0:14,0:13:21.12:0,21,725	0/0:19,0:19:51.16:0,51,1189	1/1:6,0:6:2.92:37,3,0	0/0:4,0:4:5.16:0,5,53	0/0:11,0:9:0.22:0,0,321	0/1:17,0:17:2.72:13,0,3	./.	0/1:11,0:9:0:0,0,0	0/1:15,0:14:9.93:65,0,10	0/1:5,1:5:0:0,0,0	0/1:15,0:14:0.12:0,0,0	0/0:21,0:21:44.95:0,45,555	0/0:10,1:11:19.85:0,20,241	0/0:18,0:18:15.93:0,16,329
chr10	48653460	.	TGC	T	3013.45	PASS	AB=0.567;AC=20;AF=0.455;AN=44;BaseQRankSum=10.194;DP=504;FS=1.206;HRun=0;HaplotypeScore=79.9636;InbreedingCoeff=0.7469;MQ=47.17;MQ0=37;MQRankSum=-10.285;QD=20.78;ReadPosRankSum=1.037;VQSLOD=3.9724;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:19:39.12:0,39,734	0/0:7,0:7:21.07:0,21,426	0/0:51,0:4:11.14:0,11,141	0/0:81,0:22:11.65:0,12,295	./.	0/0:19,0:19:54.18:0,54,1029	0/0:20,0:20:45:0,45,837	0/0:33,0:26:78.26:0,78,1524	0/0:5,0:5:12.04:0,12,243	1/1:0,15:15:45.15:713,45,0	./.	1/1:0,12:12:2.83:49,3,0	1/1:0,17:15:20.86:327,21,0	1/1:1,8:8:12.04:190,12,0	0/0:16,0:16:41.34:0,41,766	0/0:23,0:23:66.23:0,66,1273	0/0:2,4:4:0:0,0,0	0/1:1,2:3:11.87:43,0,12	1/1:2,7:6:18.06:293,18,0	1/1:0,16:16:3.01:49,3,0	./.	0/1:2,14:14:0:0,0,0	./.	./.	./.	1/1:1,20:21:6.33:737,6,0	1/1:0,12:12:21.07:342,21,0	1/1:0,15:15:27.08:439,27,0
chr10	48653473	.	CTCTCTG	C	992.12	PASS	AB=0.967;AC=15;AF=0.326;AN=46;BaseQRankSum=7.913;DP=548;FS=3.903;HRun=0;HaplotypeScore=109.6053;InbreedingCoeff=0.4438;MQ=44.47;MQ0=42;MQRankSum=-7.441;QD=6.89;ReadPosRankSum=-0.582;VQSLOD=2.0577;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:25:41.81:0,42,1109	0/0:8,0:8:21.07:0,21,565	0/0:41,0:3:2.69:0,3,71	0/0:61,0:18:3.69:0,4,43	./.	0/0:23,0:22:44.88:0,45,1128	0/0:22,0:22:21.05:0,21,486	0/0:28,0:19:26.97:0,27,241	0/0:5,0:5:12.04:0,12,291	1/1:12,4:15:26.82:341,27,0	./.	1/1:10,6:15:3.37:53,3,0	1/1:17,6:18:3.47:36,3,0	1/1:6,5:10:9.03:142,9,0	0/0:19,0:18:38.91:0,39,1075	0/0:23,0:23:60.18:0,60,1571	0/0:7,0:4:0:0,0,0	1/1:5,0:3:2.98:21,3,0	0/1:13,0:9:24.58:25,0,26	0/0:21,0:21:0.39:0,0,1	0/0:7,0:6:0:0,0,0	./.	./.	0/0:8,3:9:0:0,0,0	./.	0/1:24,3:25:47.40:335,0,47	0/1:16,0:15:16.64:17,0,20	1/1:12,5:17:14.87:168,15,0
chr10	48653485	.	GTC	G	329.73	PASS	AB=0.857;AC=15;AF=0.313;AN=48;BaseQRankSum=8.113;DP=518;FS=6.628;HRun=0;HaplotypeScore=87.7552;InbreedingCoeff=0.4119;MQ=43.29;MQ0=36;MQRankSum=-5.826;QD=2.31;ReadPosRankSum=-0.376;VQSLOD=1.2389;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:28:45.13:0,45,784	0/0:8,0:8:22.63:0,23,388	0/0:31,0:3:6.49:0,6,104	0/1:40,0:15:7.46:7,0,43	./.	0/0:23,0:21:45.08:0,45,812	0/0:20,0:20:22.63:0,23,382	0/0:25,0:18:51.12:0,51,796	0/0:10,0:6:12.04:0,12,220	0/0:17,0:16:5.07:0,5,172	./.	1/1:14,0:13:2.39:6,2,0	0/0:25,0:19:1.86:0,2,18	1/1:12,0:10:4.74:13,5,0	0/0:21,0:19:42.08:0,42,746	0/0:25,0:25:66.22:0,66,1162	0/0:9,0:5:2.80:0,3,13	1/1:4,0:2:2.60:10,3,0	0/1:5,6:7:6.91:149,0,7	1/1:0,15:15:0.83:3,1,0	0/1:3,4:5:0:0,0,0	./.	./.	0/1:12,0:10:0:0,0,0	0/0:13,0:11:2.50:0,2,9	0/0:27,0:25:13.86:0,14,274	1/1:2,11:12:20.90:262,21,0	0/1:14,0:13:5.65:6,0,13
chr10	48653501	.	C	CTG	83.16	PASS	AB=0.981;AC=10;AF=0.192;AN=52;BaseQRankSum=3.121;DP=497;FS=1.247;HRun=0;HaplotypeScore=86.7873;InbreedingCoeff=0.1105;MQ=33.66;MQ0=47;MQRankSum=-3.684;QD=0.55;ReadPosRankSum=-2.394;VQSLOD=1.3506;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:29:45.09:0,45,639	0/0:8,0:8:24:0,24,338	0/0:6,0:1:3:0,3,26	0/0:11,0:3:0.90:0,1,7	1/1:26,1:24:2.84:14,3,0	0/0:26,0:21:41.41:0,41,639	0/0:26,0:24:29.81:0,30,361	0/0:26,0:16:21.36:0,21,207	0/0:11,0:7:12.03:0,12,162	0/1:17,2:16:71.20:71,0,203	./.	0/0:13,0:12:9.07:0,9,72	0/0:29,0:20:1.03:0,1,114	0/1:13,0:11:19.56:27,0,20	0/0:23,0:21:45.12:0,45,643	0/0:24,0:24:63.13:0,63,909	0/1:11,0:7:8.56:9,0,18	0/1:4,0:2:7.68:8,0,14	0/0:9,0:4:11.94:0,12,119	0/1:15,0:15:0.16:0,0,0	0/1:10,0:7:0:0,0,0	./.	0/1:21,0:20:0:0,0,0	0/0:17,0:13:3:0,3,25	0/0:9,0:8:5.30:0,5,26	0/1:30,2:27:67.62:68,0,245	0/0:14,0:12:15.41:0,15,101	0/0:13,0:12:15.05:0,15,72
chr10	48653503	.	C	CTG	102	PASS	AB=0.967;AC=12;AF=0.240;AN=50;BaseQRankSum=5.006;DP=498;FS=0.000;HRun=0;HaplotypeScore=87.7897;InbreedingCoeff=0.2368;MQ=33.92;MQ0=47;MQRankSum=-4.400;QD=0.77;ReadPosRankSum=-1.720;VQSLOD=1.3841;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:29:45.07:0,45,638	0/0:9,0:9:24:0,24,337	0/0:4,0:1:3:0,3,25	./.	0/0:26,2:25:2.99:0,3,23	0/0:26,0:21:41.41:0,41,638	0/0:27,0:25:16.20:0,16,327	0/0:25,0:16:44.85:0,45,582	0/0:11,0:7:12.03:0,12,162	0/0:20,0:17:12.69:0,13,247	./.	0/0:14,0:13:8.82:0,9,59	0/0:28,0:19:2.61:0,3,133	0/0:12,0:11:4.87:0,5,32	0/0:24,0:22:45.12:0,45,645	0/0:24,0:24:61.44:0,61,895	1/1:10,1:7:6.08:61,6,0	0/1:4,1:3:14.42:43,0,14	0/1:10,0:4:9.15:9,0,47	1/1:15,0:15:2.92:17,3,0	0/1:10,0:7:0:0,0,0	./.	0/1:21,0:20:0:0,0,0	0/0:17,0:13:3:0,3,25	0/0:9,0:8:5.52:0,6,27	0/1:32,1:28:39.46:39,0,275	1/1:14,0:12:3.54:46,4,0	0/1:13,0:12:12.44:12,0,43
chr10	48653507	.	GTC	G	487.59	PASS	AB=0.917;AC=15;AF=0.313;AN=48;BaseQRankSum=5.953;DP=508;FS=1.934;HRun=0;HaplotypeScore=92.4900;InbreedingCoeff=0.2677;MQ=34.14;MQ0=46;MQRankSum=-4.134;QD=2.36;ReadPosRankSum=0.289;VQSLOD=2.0511;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:29:41.19:0,41,590	0/0:10,0:10:14.83:0,15,164	./.	./.	0/0:28,0:25:0.46:0,0,1	0/0:25,0:21:26.28:0,26,337	1/1:9,19:26:8.39:74,8,0	0/0:25,0:16:33.53:0,34,409	0/0:11,0:7:2.94:0,3,45	0/1:21,0:18:33.96:104,0,34	./.	0/0:16,0:15:3.46:0,3,25	0/0:28,0:19:9:0,9,89	1/1:12,1:11:5.77:38,6,0	0/1:24,0:22:38.45:38,0,349	0/0:24,0:24:43.75:0,44,603	0/1:10,0:6:1.23:21,0,1	0/0:5,0:3:0.96:0,1,2	0/1:7,3:4:27.70:32,0,28	0/1:11,5:16:1.42:12,0,1	0/0:9,4:10:3:0,3,30	./.	0/1:20,2:21:0.01:0,0,0	0/0:18,0:13:4.54:0,5,28	0/0:11,0:10:2.96:0,3,19	0/1:33,1:29:49:49,0,91	1/1:7,8:13:10.25:145,10,0	1/1:14,0:13:10.18:118,10,0
chr10	48653519	.	C	CTG	1285.39	PASS	AB=0.921;AC=16;AF=0.333;AN=48;BaseQRankSum=6.281;DP=516;FS=2.871;HRun=0;HaplotypeScore=101.6304;InbreedingCoeff=0.0144;MQ=34.30;MQ0=48;MQRankSum=-4.884;QD=5.52;ReadPosRankSum=2.893;VQSLOD=2.4826;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:30:44.62:0,45,655	0/0:10,0:10:23.58:0,24,233	./.	./.	1/1:16,11:25:5.41:43,5,0	0/0:24,0:20:26.34:0,26,371	0/1:27,0:25:8.53:9,0,77	0/0:27,0:15:43.13:0,43,525	0/0:12,0:8:6:0,6,71	0/1:14,7:18:18.23:410,0,18	./.	0/0:16,0:14:2.63:0,3,57	0/0:29,0:20:14.70:0,15,154	1/1:8,4:11:9.46:83,9,0	0/0:24,0:21:26.60:0,27,431	0/0:18,0:18:47.95:0,48,657	0/1:11,2:9:26.86:34,0,27	0/1:6,0:4:11.48:28,0,11	0/1:14,0:9:12.55:13,0,63	0/1:15,0:14:8.39:21,0,8	0/1:10,0:16:10.73:37,0,11	./.	0/0:23,0:22:5.78:0,6,49	0/0:19,0:14:6.88:0,7,69	1/1:7,4:10:5.99:54,6,0	0/1:27,7:27:83.47:454,0,83	0/1:17,0:16:4.49:64,0,4	0/1:11,5:15:29.52:188,0,30
chr10	48653523	.	GTCTC	G	228.03	PASS	AB=0.954;AC=8;AF=0.160;AN=50;BaseQRankSum=0.624;DP=531;FS=6.065;HRun=0;HaplotypeScore=113.4179;InbreedingCoeff=0.1722;MQ=34.43;MQ0=53;MQRankSum=1.797;QD=1.75;ReadPosRankSum=0.194;VQSLOD=1.3941;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:30:14.72:0,15,194	0/0:9,0:9:12.03:0,12,107	./.	./.	0/0:28,0:26:4.70:0,5,29	0/0:19,1:18:4.12:0,4,38	0/0:26,0:25:0.68:0,1,143	0/0:28,0:17:12.67:0,13,76	0/0:15,0:10:5.95:0,6,100	0/0:21,0:18:27.77:0,28,310	0/0:16,0:14:5.99:0,6,49	1/1:14,2:14:9.02:112,9,0	0/1:26,2:19:37.40:65,0,37	0/0:13,0:12:2.91:0,3,33	0/1:24,0:22:1.13:1,0,216	0/0:19,0:20:17.79:0,18,271	0/0:17,0:12:9.07:0,9,60	0/0:8,0:5:6.21:0,6,22	0/0:14,0:9:5.21:0,5,39	0/0:13,0:12:7.47:0,7,30	0/0:18,0:16:4.78:0,5,34	./.	0/1:22,2:23:15.41:15,0,16	1/1:15,5:15:8.76:136,9,0	0/0:11,0:10:5.99:0,6,49	0/0:35,0:28:35.12:0,35,328	0/1:17,0:15:19.40:22,0,19	0/0:17,0:14:9.44:0,9,52
chr10	48653553	.	C	CTT	1063.41	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=3.951;DP=611;FS=1.143;HRun=1;HaplotypeScore=108.4745;InbreedingCoeff=0.7734;MQ=42.49;MQ0=45;MQRankSum=-0.068;QD=10.63;ReadPosRankSum=0.127;VQSLOD=0.2205;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:32:50.59:0,51,458	0/0:11,0:11:29.60:0,30,270	0/0:13,0:4:1.79:0,2,29	0/1:27,0:8:0.12:0,0,69	0/0:25,0:22:15.33:0,15,196	0/0:20,0:15:20.87:0,21,181	0/0:26,0:25:36.84:0,37,329	0/0:35,0:29:80.68:0,81,656	0/0:17,0:13:12.92:0,13,159	0/0:23,0:23:38.01:0,38,368	0/0:14,0:11:17.95:0,18,144	0/0:21,0:19:3.13:0,3,79	0/0:26,0:19:26.72:0,27,193	0/0:12,0:11:14.97:0,15,130	0/0:27,0:25:41.80:0,42,389	0/0:23,0:23:45.33:0,45,419	0/0:21,0:17:14.08:0,14,161	0/0:16,0:13:11.66:0,12,165	1/1:10,2:12:11.20:205,11,0	1/1:9,2:11:9.60:154,10,0	1/1:27,1:26:44.85:434,45,0	0/0:23,0:19:11.98:0,12,98	0/0:22,0:21:23.33:0,23,194	0/0:25,0:22:20.90:0,21,159	0/0:13,0:11:11.43:0,11,76	0/0:37,0:32:76.26:0,76,524	1/1:19,3:20:50.34:421,50,0	0/0:20,0:18:38.90:0,39,259
chr10	48653811	.	AT	A	7384.69	PASS	AB=1.000;AC=37;AF=0.661;AN=56;BaseQRankSum=7.692;DP=425;FS=28.709;HRun=4;HaplotypeScore=40.9846;InbreedingCoeff=0.9161;MQ=52.11;MQ0=24;MQRankSum=-1.899;QD=28.08;ReadPosRankSum=2.968;VQSLOD=2.8287;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:25:68.51:0,69,882	0/0:10,0:10:27.09:0,27,378	0/0:7,0:5:15.05:0,15,200	0/1:4,0:3:7.65:8,0,78	1/1:0,22:21:45.14:539,45,0	0/0:28,0:26:69.19:0,69,943	0/0:17,0:16:45.12:0,45,609	0/0:32,0:27:72.21:0,72,959	0/0:12,0:9:27.05:0,27,356	1/1:1,21:21:60.18:719,60,0	1/1:0,16:15:30.09:359,30,0	1/1:1,12:11:30.09:360,30,0	1/1:0,14:13:36.11:432,36,0	1/1:0,10:10:27.08:324,27,0	0/0:13,0:13:36.12:0,36,500	0/0:15,0:14:36.12:0,36,493	1/1:0,15:13:36.11:432,36,0	1/1:1,10:10:24.07:288,24,0	1/1:2,20:22:54.16:648,54,0	1/1:1,26:27:57.17:683,57,0	1/1:0,4:4:12.04:144,12,0	1/1:0,8:8:15.05:180,15,0	1/1:0,16:14:36.11:431,36,0	1/1:0,5:5:12.04:144,12,0	1/1:1,14:15:33.10:396,33,0	1/1:0,16:16:45.05:507,45,0	1/1:0,17:17:48.15:576,48,0	1/1:0,6:6:18.06:216,18,0
chr10	48654716	.	AGTGTGTGTGT	A	1230.39	PASS	AB=0.887;AC=32;AF=0.696;AN=46;BaseQRankSum=-0.993;DP=399;FS=25.087;HRun=0;HaplotypeScore=92.6322;InbreedingCoeff=0.3831;MQ=28.44;MQ0=101;MQRankSum=-0.931;QD=4.79;ReadPosRankSum=0.240;VQSLOD=0.1480;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:15,4:14:2.53:87,3,0	1/1:1,1:2:2.38:87,2,0	./.	./.	1/1:22,0:17:6.49:140,6,0	1/1:16,0:17:3.01:30,3,0	1/1:14,0:10:8.19:36,8,0	./.	1/1:11,0:9:2.69:23,3,0	1/1:13,6:18:3.72:215,4,0	1/1:12,2:12:5.98:108,6,0	./.	0/0:11,0:12:6.02:0,6,100	0/1:13,0:12:0.01:0,0,0	1/1:10,0:6:3.01:32,3,0	0/0:15,0:18:18.06:0,18,274	0/1:17,7:11:19.28:82,0,19	1/1:5,0:2:2.99:23,3,0	./.	1/1:18,0:15:0.89:2,1,0	0/0:13,0:2:0.89:0,1,2	0/0:9,0:11:2.93:0,3,59	0/0:13,0:11:6.02:0,6,108	0/0:15,0:13:10.76:0,11,202	1/1:11,4:14:9.03:216,9,0	1/1:27,0:25:2.96:20,3,0	1/1:10,0:7:2.97:21,3,0	1/1:9,1:9:9.03:245,9,0
chr10	48655253	.	T	TTGTG	1846.99	PASS	AB=0.857;AC=36;AF=0.720;AN=50;BaseQRankSum=-2.518;DP=604;FS=1.070;HRun=0;HaplotypeScore=117.9728;InbreedingCoeff=0.5184;MQ=53.72;MQ0=12;MQRankSum=-1.213;QD=4.59;ReadPosRankSum=1.507;VQSLOD=2.4217;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:34:12.24:0,12,127	0/0:11,0:11:4.89:0,5,90	./.	./.	1/1:12,6:19:4.82:138,5,0	0/0:21,0:21:11.93:0,12,164	0/0:26,0:29:9.02:0,9,118	./.	1/1:11,0:11:2.90:16,3,0	1/1:30,0:29:2.30:153,2,0	1/1:6,10:16:8.17:209,8,0	1/1:22,0:19:5.84:46,6,0	1/1:14,0:11:3.01:39,3,0	1/1:14,1:14:11.99:183,12,0	0/1:21,0:25:14.93:15,0,62	0/0:12,0:13:9.02:0,9,114	1/1:17,8:25:8.99:210,9,0	1/1:20,0:17:6.91:94,7,0	1/1:19,0:18:4.88:69,5,0	0/1:12,7:19:0:0,0,0	0/0:23,0:16:3.11:0,3,9	1/1:17,0:15:7.24:111,7,0	1/1:19,0:36:7.88:171,8,0	1/1:18,7:27:8.82:153,9,0	1/1:9,1:15:5.75:82,6,0	1/1:14,12:23:9.69:37,10,0	1/1:21,2:22:14.50:119,14,0	1/1:12,2:18:10.32:157,10,0
chr10	48656480	.	A	AG	2692.91	PASS	AB=0.991;AC=35;AF=0.625;AN=56;BaseQRankSum=4.775;DP=486;FS=1.802;HRun=0;HaplotypeScore=116.1344;InbreedingCoeff=0.7837;MQ=56.53;MQ0=25;MQRankSum=0.692;QD=8.24;ReadPosRankSum=3.779;VQSLOD=3.4179;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:71.11:0,71,476	0/0:12,0:12:29.43:0,29,206	0/0:19,0:10:10.22:0,10,104	0/1:34,0:13:2.79:3,0,11	1/1:19,0:18:36.67:202,37,0	0/0:10,0:10:26.14:0,26,227	0/0:13,0:13:32.05:0,32,246	0/0:27,0:24:27.44:0,27,357	0/0:21,0:21:43.35:0,43,324	1/1:10,0:10:26.09:182,26,0	1/1:14,0:13:11.28:123,11,0	1/1:21,0:20:5.16:114,5,0	1/1:13,0:12:22.92:134,23,0	1/1:15,1:15:10.56:132,11,0	0/0:9,0:9:20.25:0,20,130	0/0:18,0:15:41.82:0,42,297	1/1:23,3:24:37.68:266,38,0	0/1:11,0:9:0.05:70,0,0	0/1:19,0:17:4.56:185,0,5	1/1:25,0:22:34.85:339,35,0	1/1:9,0:9:17.41:121,17,0	1/1:14,0:14:32.34:170,32,0	1/1:16,0:15:35.70:208,36,0	1/1:14,0:14:10.85:77,11,0	1/1:20,0:19:27.83:173,28,0	1/1:21,0:21:23.49:230,23,0	1/1:23,0:22:11.97:147,12,0	1/1:1,0:1:2.99:24,3,0
chr10	48657708	.	T	TGTAA	23168.56	PASS	AB=0.962;AC=29;AF=0.518;AN=56;BaseQRankSum=-14.180;DP=740;FS=18.749;HRun=0;HaplotypeScore=116.3141;InbreedingCoeff=0.9415;MQ=69.31;MQ0=0;MQRankSum=-1.058;QD=57.63;ReadPosRankSum=0.367;VQSLOD=5.1981;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,117,2051	0/0:8,0:8:18.06:0,18,327	0/0:20,0:20:54.12:0,54,842	0/0:12,0:12:30.10:0,30,520	1/1:6,27:36:81.18:1876,81,0	0/0:13,0:13:39.13:0,39,709	0/0:35,0:35:99:0,99,1685	0/0:26,0:26:63.21:0,63,1113	0/0:35,0:35:99:0,99,1759	1/1:3,23:27:78.26:1982,78,0	1/1:3,14:18:45.11:1115,45,0	1/1:2,17:20:45.15:1178,45,0	1/1:4,26:32:78.27:1995,78,0	1/1:4,16:22:48.03:1201,48,0	0/0:33,0:33:93.32:0,93,1692	0/1:24,1:25:6.08:6,0,1164	1/1:5,41:47:99:2613,102,0	1/1:0,25:26:75.21:1906,75,0	0/0:21,0:21:49.97:0,50,823	0/0:24,0:24:66.23:0,66,1200	0/0:42,0:42:99:0,120,2145	1/1:5,24:29:72.20:1783,72,0	1/1:5,24:30:84.16:1928,84,0	1/1:2,20:23:57.15:1434,57,0	1/1:3,20:23:60.12:1453,60,0	1/1:8,20:30:75.25:1871,75,0	0/0:26,0:24:78.27:0,78,1412	1/1:2,10:14:36.04:826,36,0
chr10	48658350	.	TGC	T	2993.55	PASS	AB=0.996;AC=37;AF=0.661;AN=56;BaseQRankSum=2.621;DP=657;FS=16.081;HRun=0;HaplotypeScore=119.8441;InbreedingCoeff=0.5959;MQ=57.98;MQ0=10;MQRankSum=0.488;QD=5.84;ReadPosRankSum=0.370;VQSLOD=1.9965;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:36:66.52:0,67,679	0/0:7,0:7:20.89:0,21,209	0/1:20,0:9:26.77:27,0,29	0/1:17,0:11:20.23:28,0,20	1/1:15,0:15:4.04:94,4,0	0/0:18,0:18:26.91:0,27,353	0/0:32,0:32:64.09:0,64,722	1/1:25,0:25:31.31:328,31,0	0/0:20,0:20:20.36:0,20,425	1/1:19,0:19:29.48:263,29,0	1/1:12,0:12:16.65:128,17,0	1/1:29,0:29:8.89:59,9,0	1/1:24,0:24:16.20:117,16,0	1/1:18,0:18:23.72:188,24,0	0/0:17,0:17:26.34:0,26,317	0/0:13,0:13:12.57:0,13,180	1/1:51,2:53:1.25:234,1,0	1/1:33,0:33:7.21:277,7,0	1/1:12,0:12:11.09:131,11,0	1/1:15,1:16:15.47:217,15,0	1/1:90,1:91:8.28:474,8,0	0/1:8,0:8:0:0,0,0	1/1:18,1:19:3.01:42,3,0	0/1:44,1:44:0.01:0,0,0	1/1:11,0:10:10.04:66,10,0	1/1:6,14:20:24.70:316,25,0	1/1:16,0:16:19.37:132,19,0	0/1:10,0:9:5.90:59,0,6
chr10	48658353	.	GCGCA	G	2452.79	PASS	AB=0.940;AC=26;AF=0.464;AN=56;BaseQRankSum=-4.004;DP=659;FS=12.872;HRun=0;HaplotypeScore=133.0887;InbreedingCoeff=-0.1306;MQ=56.81;MQ0=10;MQRankSum=-0.847;QD=4.86;ReadPosRankSum=-0.259;VQSLOD=1.8502;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:48:85.89:0,86,1023	0/0:8,0:8:20.89:0,21,256	0/1:15,0:4:26.77:27,0,29	0/1:16,0:10:20.23:28,0,20	0/1:15,0:15:47.88:86,0,48	0/0:18,0:18:18.42:0,18,473	0/0:31,0:31:80.68:0,81,936	1/1:22,0:22:9.42:269,9,0	0/0:20,0:20:31.66:0,32,639	0/1:19,0:19:42.77:230,0,43	0/1:12,0:12:45.31:89,0,45	1/1:8,20:28:8.89:60,9,0	1/1:9,15:24:13.04:193,13,0	1/1:16,0:17:2.95:164,3,0	0/0:15,0:15:13.96:0,14,386	0/0:12,0:12:23.91:0,24,285	0/1:53,0:53:99:103,0,495	0/1:35,0:35:99:243,0,204	0/1:10,0:11:29.91:133,0,30	0/1:14,1:15:51.01:211,0,51	0/1:90,1:92:99:292,0,497	0/1:2,0:8:0.01:0,0,0	1/1:5,13:18:2.74:12,3,0	0/1:8,37:45:0.01:0,0,0	0/1:12,0:11:42.40:48,0,42	0/1:19,0:19:43.07:274,0,43	0/1:18,0:18:25.49:106,0,25	0/1:10,0:9:51.54:52,0,59
chr10	48658355	.	GCA	G	111.88	PASS	AB=0.957;AC=10;AF=0.200;AN=50;BaseQRankSum=-2.997;DP=688;FS=1.696;HRun=0;HaplotypeScore=141.6551;InbreedingCoeff=-0.1015;MQ=55.76;MQ0=10;MQRankSum=1.550;QD=0.49;ReadPosRankSum=0.831;VQSLOD=2.3930;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:48,0:47:48.79:49,0,285	0/0:8,0:8:6.02:0,6,88	./.	./.	0/0:16,0:16:9:0,9,92	0/1:17,0:17:38.70:39,0,125	0/1:28,1:29:38.26:38,0,251	0/0:23,0:23:15.12:0,15,97	0/1:19,0:19:11.58:12,0,217	0/0:21,0:21:7.71:0,8,182	0/0:12,0:12:8.78:0,9,70	0/0:35,0:35:5.22:0,5,38	0/0:32,0:32:3.33:0,3,70	0/0:18,0:18:2.99:0,3,23	0/1:13,1:16:53.16:53,0,96	0/1:9,2:11:20.23:20,0,82	0/0:54,0:54:39.92:0,40,533	0/0:36,0:36:29.93:0,30,247	0/0:13,0:13:1.87:0,2,53	0/0:16,0:16:1.79:0,2,95	0/0:94,0:94:47.02:0,47,602	./.	1/1:20,0:20:2.83:16,3,0	0/1:50,0:49:0.33:0,0,0	0/0:11,0:10:5.99:0,6,48	0/1:18,0:18:8.77:9,0,88	0/0:17,0:17:14.80:0,15,87	0/0:10,0:9:14.97:0,15,137
chr10	48658377	.	A	ACG	247.24	PASS	AB=0.964;AC=10;AF=0.179;AN=56;BaseQRankSum=10.878;DP=738;FS=10.593;HRun=0;HaplotypeScore=144.6266;InbreedingCoeff=0.0849;MQ=53.10;MQ0=18;MQRankSum=1.111;QD=0.76;ReadPosRankSum=10.539;VQSLOD=0.0106;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:51:48.95:0,49,763	0/0:5,0:5:11.94:0,12,133	0/0:16,0:5:11.90:0,12,92	0/0:21,0:4:11.95:0,12,93	0/0:18,0:17:7.04:0,7,104	0/0:20,0:20:44.99:0,45,446	0/0:25,0:25:65.85:0,66,668	0/0:26,0:26:64.90:0,65,472	0/0:17,0:17:42.02:0,42,466	0/0:24,0:24:11.05:0,11,281	0/1:13,0:13:21.97:22,0,36	0/0:29,7:36:21.68:0,22,120	0/1:24,9:33:84.64:107,0,85	0/0:18,0:18:3.25:0,3,46	0/0:18,0:18:35.96:0,36,333	0/0:11,0:11:26.94:0,27,251	0/1:60,0:59:99:127,0,200	0/1:33,0:33:8.40:8,0,166	0/0:20,0:19:4.43:0,4,263	0/0:10,0:10:3.62:0,4,126	0/1:111,0:111:56.38:56,0,394	0/0:13,1:13:2.04:0,2,6	0/0:20,3:22:7.08:0,7,50	1/1:44,1:43:0.18:2,0,0	0/0:11,0:11:2.35:0,2,79	0/0:27,0:26:59.88:0,60,563	1/1:17,0:17:11.90:51,12,0	0/1:13,0:11:1.46:1,0,117
chr10	48658383	.	A	ACG	5143.54	PASS	AB=0.660;AC=29;AF=0.518;AN=56;BaseQRankSum=10.785;DP=767;FS=0.000;HRun=0;HaplotypeScore=133.1981;InbreedingCoeff=0.4806;MQ=53.65;MQ0=20;MQRankSum=3.246;QD=9.37;ReadPosRankSum=5.012;VQSLOD=4.3208;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:51:45.83:0,46,739	0/0:6,0:6:15:0,15,163	0/0:17,0:6:14.92:0,15,142	0/0:21,0:5:11.97:0,12,103	0/1:4,14:17:3.91:63,0,4	0/0:20,0:20:44.97:0,45,441	0/0:24,0:24:65.93:0,66,675	0/0:32,0:32:85.95:0,86,663	0/0:17,0:17:44.80:0,45,471	1/1:6,20:26:29.83:510,30,0	0/1:3,11:14:4.17:142,0,4	1/1:28,7:35:35.88:244,36,0	0/1:23,9:32:15.74:206,0,16	1/1:3,17:21:2.63:54,3,0	0/0:17,0:17:35.96:0,36,334	0/0:11,0:11:26.93:0,27,254	1/1:10,48:59:1.16:1005,1,0	0/1:7,28:35:17.60:408,0,18	0/1:20,2:20:27.47:205,0,27	1/1:8,2:10:22.39:252,22,0	1/1:35,81:118:34.81:1004,35,0	1/1:15,1:15:8.86:70,9,0	1/1:19,3:21:11.19:82,11,0	1/1:42,1:41:5.91:43,6,0	0/1:2,9:11:0.48:50,0,0	1/1:30,1:30:19.50:432,19,0	1/1:0,19:19:15.52:272,16,0	0/1:9,7:14:42.53:99,0,43
chr10	48659081	.	TATATATTC	T	14911.49	PASS	AB=1.000;AC=32;AF=0.571;AN=56;BaseQRankSum=16.795;DP=651;FS=0.328;HRun=0;HaplotypeScore=180.5990;InbreedingCoeff=0.6796;MQ=62.29;MQ0=0;MQRankSum=-10.524;QD=33.89;ReadPosRankSum=0.356;VQSLOD=4.0567;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,132,4600	0/0:13,0:13:39.13:0,39,1550	0/0:10,0:10:30.10:0,30,555	0/0:16,0:17:26.98:0,27,451	1/1:1,38:39:79.38:1536,79,0	0/0:25,0:25:72.25:0,72,2506	0/0:22,0:22:60.21:0,60,1850	0/1:41,0:41:99:377,0,983	0/0:20,0:20:57.20:0,57,1807	1/1:1,32:33:90.30:1936,90,0	1/1:1,17:18:36.08:648,36,0	1/1:1,24:25:45.15:1080,45,0	1/1:1,26:27:11.43:1333,11,0	1/1:1,25:27:54.18:1335,54,0	0/0:20,0:20:60.21:0,60,1954	0/0:21,0:21:54.19:0,54,1970	1/1:2,17:19:23.67:474,24,0	1/1:3,0:3:9.03:157,9,0	0/1:18,0:18:99:188,0,500	0/1:27,0:27:99:477,0,386	0/0:17,0:17:17.28:0,17,297	1/1:0,18:18:51.17:1236,51,0	1/1:2,26:28:42.03:974,42,0	1/1:0,17:17:5.98:59,6,0	1/1:1,19:21:33.11:846,33,0	1/1:3,21:24:57.17:1178,57,0	0/1:26,0:26:99:419,0,345	1/1:0,29:29:24.08:660,24,0
chr10	48659083	.	TATATTCATATTC	T	2970.13	PASS	AB=0.994;AC=13;AF=0.232;AN=56;BaseQRankSum=12.291;DP=650;FS=4.532;HRun=0;HaplotypeScore=265.9715;InbreedingCoeff=0.3261;MQ=62.41;MQ0=0;MQRankSum=-11.272;QD=12.38;ReadPosRankSum=6.206;VQSLOD=1.3330;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,102,5545	0/0:14,0:14:39.13:0,39,2208	0/0:10,0:10:9.03:0,9,298	0/1:17,0:17:3.43:3,0,235	0/0:39,0:39:48.35:0,48,427	0/0:25,0:25:54.19:0,54,3030	0/0:22,0:22:39.13:0,39,2015	0/0:24,0:41:77.67:0,78,1122	0/0:20,0:20:45.15:0,45,2196	0/0:33,0:33:10.51:0,11,175	0/0:18,0:18:22.48:0,22,215	0/1:25,0:25:2.23:2,0,103	0/1:27,0:27:9.47:9,0,56	0/1:27,0:27:77.95:78,0,79	0/0:21,0:21:45.15:0,45,2342	0/0:20,0:20:48.16:0,48,2645	0/0:17,0:17:11.83:0,12,138	0/0:3,0:3:4.26:0,4,41	1/1:12,6:18:18.06:573,18,0	1/1:10,17:27:36.12:1236,36,0	0/0:10,9:19:0.89:0,1,2	0/0:18,0:18:12.33:0,12,153	0/0:27,0:27:21.04:0,21,158	0/0:17,0:17:9.03:0,9,106	0/1:20,0:20:26.71:78,0,27	0/1:22,1:23:93.78:94,0,141	1/1:10,17:27:30.10:1053,30,0	0/1:29,0:29:1.66:2,0,35
chr10	48659457	.	A	AT	10191.43	PASS	AB=1.000;AC=37;AF=0.661;AN=56;BaseQRankSum=-10.688;DP=505;FS=1.798;HRun=8;HaplotypeScore=47.3181;InbreedingCoeff=0.9245;MQ=67.52;MQ0=0;MQRankSum=-0.680;QD=27.92;ReadPosRankSum=3.494;VQSLOD=5.2696;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:66.03:0,66,604	0/0:12,0:12:24:0,24,220	0/1:12,0:11:6.16:6,0,174	0/0:4,0:4:8.91:0,9,66	1/1:6,28:34:78.23:900,78,0	0/0:18,0:18:45.01:0,45,407	0/0:9,0:9:24.01:0,24,220	0/0:28,0:28:69:0,69,624	0/0:11,0:11:23.97:0,24,220	1/1:5,24:29:72.20:821,72,0	1/1:1,12:13:36.11:415,36,0	1/1:0,12:12:30.09:346,30,0	1/1:1,9:10:24.07:277,24,0	1/1:2,14:16:42.12:485,42,0	0/0:17,0:17:42.02:0,42,384	0/0:14,0:14:36.01:0,36,330	1/1:2,23:25:69.21:796,69,0	1/1:2,17:19:48.14:554,48,0	1/1:7,12:19:36.09:404,36,0	1/1:1,25:26:75.22:865,75,0	1/1:0,12:12:36.11:415,36,0	1/1:1,8:9:21.06:242,21,0	1/1:1,24:26:63.02:705,63,0	1/1:0,11:11:24.07:277,24,0	1/1:5,11:16:30.09:346,30,0	1/1:3,31:34:96.26:1094,96,0	1/1:2,19:21:51.15:585,51,0	1/1:0,21:21:57.17:658,57,0
chr10	48659811	.	G	GGT	329.72	PASS	AB=0.867;AC=10;AF=0.192;AN=52;BaseQRankSum=-2.858;DP=593;FS=2.336;HRun=0;HaplotypeScore=90.4888;InbreedingCoeff=0.1087;MQ=57.12;MQ0=16;MQRankSum=-0.523;QD=2.11;ReadPosRankSum=-1.552;VQSLOD=1.9285;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:25:0,25,262	0/0:6,0:6:6.02:0,6,65	./.	./.	0/0:24,0:24:9.01:0,9,90	0/0:16,0:19:8.85:0,9,72	0/0:15,0:17:7.01:0,7,60	0/0:32,0:29:0.47:0,0,1	0/0:19,0:20:14.86:0,15,136	0/0:21,0:21:11.22:0,11,115	0/0:16,0:16:9.02:0,9,98	0/1:14,4:19:26.70:39,0,27	1/1:16,0:16:2.93:42,3,0	0/0:15,0:16:14.87:0,15,143	0/0:18,0:22:23.73:0,24,223	0/0:7,0:12:11.36:0,11,56	0/0:36,0:36:17.87:0,18,169	0/1:19,2:22:41.79:42,0,98	0/1:14,0:14:18.19:18,0,56	0/1:23,0:23:6.71:7,0,108	0/0:25,0:24:24.06:0,24,259	1/1:10,6:17:9.03:134,9,0	0/1:14,5:19:32.79:33,0,58	0/1:14,7:23:99:152,0,108	0/0:11,0:11:6:0,6,57	0/0:21,0:21:5.50:0,6,57	0/0:19,0:18:9.02:0,9,98	0/0:14,0:13:9:0,9,89
chr10	48661382	.	AACACAACACAC	A	1741.30	PASS	AB=0.917;AC=19;AF=0.352;AN=54;BaseQRankSum=8.382;DP=526;FS=28.288;HRun=0;HaplotypeScore=143.7108;InbreedingCoeff=0.4751;MQ=63.86;MQ0=41;MQRankSum=-4.322;QD=8.14;ReadPosRankSum=-0.298;VQSLOD=0.6046;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:13.65:0,14,1249	0/0:7,0:7:21.07:0,21,563	0/0:36,0:18:48.13:0,48,613	0/0:43,0:26:62.41:0,62,796	1/1:7,11:16:11.94:331,12,0	0/0:14,0:14:37.01:0,37,988	0/0:20,0:20:45.14:0,45,932	0/0:15,0:13:33.11:0,33,479	0/0:13,0:12:30.10:0,30,799	1/1:7,8:8:12.04:220,12,0	1/1:2,12:13:3.01:104,3,0	0/1:15,0:15:36.69:37,0,183	0/1:12,0:11:24.77:25,0,153	1/1:6,0:8:3.01:80,3,0	0/0:21,0:21:48.16:0,48,997	0/0:19,0:19:48.63:0,49,1245	0/1:13,18:23:13.80:98,0,14	1/1:3,0:11:3.01:45,3,0	0/0:12,0:12:36.12:0,36,682	0/0:20,0:20:48.14:0,48,1268	0/0:20,0:18:42.10:0,42,1080	0/1:17,0:16:19.90:20,0,291	0/1:18,1:19:99:108,0,404	0/0:17,0:16:35.99:0,36,487	1/1:10,14:20:7.63:325,8,0	1/1:3,14:17:30.07:530,30,0	0/0:15,0:15:43.03:0,43,983	./.
chr10	48661387	.	AAC	A	1601.03	PASS	AB=0.986;AC=43;AF=0.935;AN=46;BaseQRankSum=-0.233;DP=539;FS=5.351;HRun=0;HaplotypeScore=80.1001;InbreedingCoeff=-0.0579;MQ=59.30;MQ0=44;MQRankSum=1.055;QD=3.71;ReadPosRankSum=0.682;VQSLOD=1.4083;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:35,2:38:17.66:145,18,0	1/1:2,4:8:14.64:124,15,0	./.	./.	1/1:18,0:17:7.82:38,8,0	1/1:12,8:20:18.52:196,19,0	1/1:16,3:19:9.50:99,9,0	./.	1/1:10,7:17:8.86:79,9,0	1/1:11,0:10:3.31:15,3,0	1/1:13,0:12:2.84:14,3,0	1/1:6,0:13:8.52:42,9,0	1/1:9,0:11:14.42:85,14,0	1/1:11,0:9:2.50:9,2,0	1/1:23,0:23:5.58:44,6,0	1/1:15,6:21:20.79:207,21,0	1/1:25,0:21:1.50:12,2,0	0/1:14,0:13:8.12:8,0,16	1/1:13,1:14:3.01:33,3,0	1/1:19,2:21:23.73:233,24,0	0/1:22,1:19:32.67:83,0,33	1/1:9,0:16:14.02:68,14,0	1/1:14,0:19:8.27:40,8,0	./.	1/1:18,0:16:8.10:41,8,0	1/1:17,0:17:6.85:38,7,0	0/1:17,0:17:26.72:52,0,27	./.
chr10	48661863	.	TGAAAGAAA	T	1975	PASS	AB=1.000;AC=17;AF=0.340;AN=50;BaseQRankSum=-0.225;DP=640;FS=10.840;HRun=0;HaplotypeScore=189.1011;InbreedingCoeff=0.4281;MQ=59.30;MQ0=4;MQRankSum=-5.980;QD=7.87;ReadPosRankSum=-1.973;VQSLOD=1.5216;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:28:14.98:0,15,155	1/1:3,6:9:11.95:273,12,0	./.	./.	0/0:23,0:23:30.08:0,30,497	1/1:12,5:17:30.09:606,30,0	./.	0/0:33,0:33:0.89:0,1,2	1/1:16,17:33:12.04:294,12,0	0/0:29,0:29:28.69:0,29,526	0/0:27,0:26:36.12:0,36,680	1/1:26,0:26:12.98:50,13,0	0/1:27,0:27:38.67:39,0,57	0/0:18,0:18:15.05:0,15,262	1/1:14,12:26:15.52:307,16,0	1/1:18,0:18:16.71:141,17,0	0/0:25,0:22:18.05:0,18,349	0/0:19,0:18:1.36:0,1,105	0/1:28,0:28:60.73:62,0,61	0/1:31,0:31:99:126,0,113	0/1:8,0:8:20.90:21,0,34	0/0:21,0:21:12.02:0,12,130	0/0:18,0:18:0.62:0,1,22	0/0:21,0:21:7.79:0,8,68	0/0:36,0:35:42.13:0,42,811	0/0:32,0:32:51.17:0,51,1042	0/1:28,0:28:90.30:228,0,90	0/0:15,0:14:21.07:0,21,703
chr10	48661873	.	A	AAAGG	7137.91	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-1.966;DP=620;FS=6.510;HRun=0;HaplotypeScore=123.9148;InbreedingCoeff=0.9762;MQ=56.51;MQ0=13;MQRankSum=3.282;QD=20.57;ReadPosRankSum=1.386;VQSLOD=4.1951;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:61.85:0,62,519	0/0:8,0:8:23.31:0,23,181	0/0:9,0:4:5.98:0,6,50	0/0:9,0:7:11.20:0,11,147	1/1:24,0:24:50.10:384,50,0	0/0:15,0:15:44.50:0,44,347	0/0:14,0:13:20.97:0,21,179	0/0:26,0:23:65.96:0,66,589	0/0:34,0:34:59.86:0,60,527	1/1:28,1:28:80.94:950,81,0	1/1:24,2:25:64.60:671,65,0	1/1:25,0:25:36.73:366,37,0	1/1:25,0:25:38.43:415,38,0	1/1:19,0:19:38.88:404,39,0	0/0:23,0:23:43.92:0,44,328	0/0:16,0:16:38.89:0,39,347	1/1:27,0:24:50.73:470,51,0	1/1:17,0:16:17.55:280,18,0	0/0:22,0:22:50.96:0,51,466	0/0:33,0:32:85.35:0,85,804	0/0:6,0:6:17.86:0,18,161	1/1:20,0:20:32.17:395,32,0	1/1:16,0:16:18.94:270,19,0	1/1:25,0:22:35.52:258,36,0	1/1:37,6:41:96.90:1089,97,0	1/1:31,0:31:60.10:837,60,0	0/0:28,0:28:74.85:0,75,829	1/1:20,0:19:30.05:352,30,0
chr10	48661918	.	AAGAAAG	A	5586.12	PASS	AB=1.000;AC=31;AF=0.554;AN=56;BaseQRankSum=3.443;DP=719;FS=60.996;HRun=0;HaplotypeScore=152.0632;InbreedingCoeff=0.2277;MQ=57.01;MQ0=52;MQRankSum=-1.649;QD=11.49;ReadPosRankSum=-1.058;VQSLOD=2.1841;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:77.02:0,77,1101	0/1:12,0:12:61.16:61,0,244	0/0:28,0:8:6.81:0,7,202	0/0:30,0:13:2.56:0,3,108	1/1:35,0:27:0.76:591,1,0	0/1:21,0:20:99:143,0,404	0/0:23,0:22:51.17:0,51,770	0/0:34,0:31:90.19:0,90,1319	0/1:34,0:34:50.55:51,0,669	0/1:25,0:22:62.31:458,0,62	0/1:27,0:24:34.79:290,0,35	1/1:0,22:22:15.05:339,15,0	1/1:1,21:22:21.04:428,21,0	0/1:19,0:18:3.94:4,0,14	0/1:25,0:25:29.79:30,0,498	0/0:15,0:15:6.35:0,6,333	0/1:27,0:22:39.02:39,0,85	1/1:8,4:8:8.85:103,9,0	1/1:28,0:23:43.57:487,44,0	1/1:22,0:19:32.88:296,33,0	1/1:20,0:15:40:527,40,0	1/1:21,0:14:30.06:406,30,0	1/1:2,13:13:2.71:62,3,0	1/1:9,19:23:0.47:1,0,0	0/0:30,0:27:19.57:0,20,139	0/1:33,0:33:79.38:505,0,79	1/1:37,0:31:12.31:766,12,0	0/0:37,0:35:21.07:0,21,329
chr10	48661922	.	AAG	A	6477.07	PASS	AB=0.696;AC=34;AF=0.607;AN=56;BaseQRankSum=6.604;DP=718;FS=84.333;HRun=0;HaplotypeScore=117.0511;InbreedingCoeff=0.7477;MQ=60.27;MQ0=48;MQRankSum=-1.435;QD=14.43;ReadPosRankSum=1.415;VQSLOD=1.5827;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:73.66:0,74,1090	0/0:13,0:13:15.31:0,15,308	0/0:32,0:12:12.56:0,13,316	0/0:37,0:15:6.31:0,6,143	1/1:6,27:25:72.17:1006,72,0	0/0:21,0:20:16.46:0,16,481	0/0:21,0:20:57.19:0,57,857	0/0:35,0:33:99:0,99,1445	0/0:34,0:34:48.16:0,48,730	1/1:26,0:23:60.90:756,61,0	1/1:26,0:23:52.96:634,53,0	1/1:22,0:22:14.94:116,15,0	1/1:22,0:22:20.92:167,21,0	1/1:18,0:17:11.96:118,12,0	0/0:24,0:24:17.76:0,18,524	0/0:15,0:15:38.91:0,39,492	1/1:22,4:22:18.28:179,18,0	1/1:8,2:7:8.97:81,9,0	1/1:26,1:23:16.68:409,17,0	0/1:12,8:17:99:170,0,134	1/1:3,18:16:14.10:478,14,0	1/1:5,17:15:35.99:446,36,0	1/1:15,0:13:4.26:45,4,0	1/1:22,3:20:0.89:2,1,0	1/1:29,0:26:40.63:426,41,0	1/1:32,0:32:66.92:852,67,0	0/1:20,18:31:99:578,0,190	1/1:37,0:36:5.04:14,5,0
chr10	48661924	.	G	GAA	7859.24	PASS	AB=0.980;AC=31;AF=0.554;AN=56;BaseQRankSum=3.172;DP=736;FS=81.722;HRun=3;HaplotypeScore=114.4189;InbreedingCoeff=0.5578;MQ=61.59;MQ0=47;MQRankSum=-0.101;QD=16.41;ReadPosRankSum=-0.679;VQSLOD=0.1302;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:81.24:0,81,1161	0/0:13,0:13:23.39:0,23,392	0/0:33,0:12:17.52:0,18,329	0/1:42,0:17:11.82:12,0,96	1/1:27,6:25:56.19:755,56,0	0/0:21,0:20:40.41:0,40,655	0/0:23,0:22:60.18:0,60,874	0/0:36,0:35:99:0,99,1443	0/0:34,0:34:60.18:0,60,841	1/1:1,27:26:67.41:999,67,0	1/1:0,26:24:54.18:893,54,0	0/0:22,0:22:5.15:0,5,13	0/1:21,0:21:1.54:46,0,2	1/1:0,16:16:12.04:212,12,0	0/0:25,0:25:22.52:0,23,579	0/0:15,0:15:38.99:0,39,517	1/1:5,23:24:21.07:342,21,0	1/1:7,2:6:3.13:71,3,0	0/1:26,0:24:19.43:349,0,19	0/1:15,1:16:99:169,0,189	1/1:21,2:18:0.49:465,0,0	1/1:17,5:15:35.99:446,36,0	1/1:13,2:13:5.14:47,5,0	1/1:24,2:21:4.26:46,4,0	1/1:0,28:25:42.14:796,42,0	1/1:1,31:32:81.26:1300,81,0	0/1:31,2:31:99:506,0,334	1/1:3,38:42:21.07:406,21,0
chr10	48661926	.	GAAAGAA	G	5025.48	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=5.082;DP=751;FS=65.619;HRun=0;HaplotypeScore=160.2130;InbreedingCoeff=0.2124;MQ=61.48;MQ0=46;MQRankSum=-0.462;QD=14.40;ReadPosRankSum=2.739;VQSLOD=2.1779;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:84.20:0,84,1795	0/0:13,0:13:6.07:0,6,476	0/0:37,0:15:31.19:0,31,589	0/0:41,0:19:26.50:0,27,245	0/1:34,0:26:99:167,0,210	0/0:21,0:20:3.96:0,4,741	0/0:24,0:23:63.21:0,63,1431	0/0:36,0:35:99:0,102,2242	0/0:35,0:35:29.75:0,30,1135	0/1:29,0:26:99:173,0,273	0/1:28,0:25:87.46:87,0,257	0/1:24,0:24:32.92:217,0,33	1/1:21,0:21:18:285,18,0	0/0:17,0:16:11.61:0,12,107	0/0:25,0:25:30.89:0,31,885	0/0:16,0:16:0.39:0,0,627	0/1:28,0:24:15.13:15,0,216	0/1:9,0:6:20.09:38,0,20	1/1:3,23:24:62.95:883,63,0	1/1:18,0:15:39.08:571,39,0	1/1:24,0:19:42.77:870,43,0	0/1:25,0:18:62.43:110,0,62	0/1:15,0:13:14.77:35,0,15	0/0:28,0:23:5.99:0,6,53	0/0:29,0:26:44.92:0,45,505	0/1:30,0:30:99:149,0,310	1/1:37,0:31:86.41:1426,86,0	0/0:43,0:42:30.07:0,30,587
chr10	48662551	.	GCACACACA	G	1619.56	PASS	AB=0.728;AC=17;AF=0.327;AN=52;BaseQRankSum=1.763;DP=424;FS=10.890;HRun=0;HaplotypeScore=108.9338;InbreedingCoeff=0.5042;MQ=65.84;MQ0=13;MQRankSum=-5.774;QD=10.73;ReadPosRankSum=0.643;VQSLOD=1.7571;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:26:24.08:0,24,673	0/0:4,0:5:6.91:0,7,189	0/0:20,0:7:0:0,0,0	./.	0/0:12,0:12:3:0,3,25	0/0:13,0:18:18.06:0,18,473	0/0:11,0:15:13.26:0,13,183	./.	0/0:11,0:15:12.04:0,12,314	1/1:10,5:14:11.96:190,12,0	1/1:13,5:19:11.93:221,12,0	0/0:4,0:9:12.03:0,12,218	0/0:3,0:6:3.01:0,3,65	1/1:6,4:11:9.03:205,9,0	0/0:16,0:18:27.04:0,27,710	0/0:7,0:11:9.03:0,9,252	1/1:12,0:12:8.98:91,9,0	0/1:11,6:17:70.84:137,0,71	0/0:11,0:11:0.94:0,1,1	0/1:15,5:22:16.06:248,0,16	0/0:16,0:17:5.36:0,5,32	0/0:8,0:9:8.64:0,9,157	0/0:10,0:15:9.88:0,10,97	0/0:12,0:20:17.57:0,18,186	1/1:8,5:13:9.03:224,9,0	1/1:9,0:8:3.01:75,3,0	0/1:15,1:26:27.94:118,0,28	1/1:0,4:5:12.04:280,12,0
chr10	48662841	.	G	GCAC	349.71	PASS	AB=0.793;AC=14;AF=0.250;AN=56;BaseQRankSum=10.503;DP=496;FS=17.627;HRun=0;HaplotypeScore=107.0760;InbreedingCoeff=-0.2491;MQ=51.98;MQ0=11;MQRankSum=-5.506;QD=1.49;ReadPosRankSum=-1.670;VQSLOD=0.6103;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:77.22:0,77,1152	0/0:10,0:10:30.09:0,30,403	0/0:25,0:10:30.10:0,30,408	0/0:14,0:8:17.04:0,17,260	0/1:10,0:15:28.17:28,0,110	0/0:10,0:9:21.07:0,21,316	0/0:19,0:19:51.15:0,51,732	0/1:32,0:31:5.54:6,0,753	0/0:15,0:15:42.14:0,42,642	0/1:10,0:14:26.99:27,0,256	0/1:11,1:17:30.13:30,0,106	0/0:14,0:20:7.23:0,7,328	0/1:9,0:11:20.52:21,0,220	0/1:9,0:14:66.97:67,0,139	0/0:20,0:20:54.18:0,54,866	0/0:21,0:21:54.18:0,54,870	0/1:19,0:24:59.95:60,0,468	0/1:23,0:21:15.74:16,0,291	0/0:19,0:18:37.14:0,37,499	0/0:12,0:19:2:0,2,322	0/0:11,0:21:22.12:0,22,373	0/0:6,0:6:6.02:0,6,82	0/0:12,0:12:21.07:0,21,277	0/1:15,1:21:33.16:33,0,314	0/1:10,0:15:76.55:77,0,99	0/1:11,0:18:99:100,0,328	0/1:12,0:20:31.29:31,0,348	1/1:5,0:5:0.47:1,0,0
chr10	48664644	.	AAAAATAATT	A	4598.41	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=5.845;DP=187;FS=2.478;HRun=0;HaplotypeScore=67.4437;InbreedingCoeff=0.7514;MQ=73.21;MQ0=0;MQRankSum=-7.499;QD=45.08;ReadPosRankSum=3.365;VQSLOD=4.5431;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:36.12:0,36,1606	0/0:3,0:3:6.02:0,6,270	0/0:15,0:10:12.04:0,12,353	0/0:16,0:12:12.60:0,13,226	1/1:2,5:7:18.02:384,18,0	0/0:5,0:5:12.04:0,12,547	0/0:5,0:5:9.03:0,9,389	0/0:14,0:14:36.12:0,36,1548	0/0:6,0:6:15.05:0,15,633	1/1:2,5:7:15.05:426,15,0	1/1:3,3:6:9.03:193,9,0	1/1:6,2:8:9.03:256,9,0	1/1:3,4:7:12.04:341,12,0	1/1:1,3:4:9.03:256,9,0	0/0:3,0:3:6.02:0,6,248	0/0:3,0:3:9.03:0,9,297	1/1:7,2:9:12.04:258,12,0	1/1:0,1:1:3.01:85,3,0	1/1:4,3:7:9.03:256,9,0	1/1:5,6:11:24.07:530,24,0	1/1:1,1:2:3.01:58,3,0	1/1:1,1:2:3.01:53,3,0	1/1:2,6:8:21.07:450,21,0	1/1:2,1:3:6.02:128,6,0	1/1:2,6:8:18.06:512,18,0	1/1:3,2:5:9.02:188,9,0	1/1:4,1:5:6.02:171,6,0	1/1:1,1:2:3.01:55,3,0
chr10	48664678	.	TA	T	3596.68	PASS	AB=0.929;AC=37;AF=0.661;AN=56;BaseQRankSum=9.383;DP=286;FS=1.337;HRun=10;HaplotypeScore=72.5868;InbreedingCoeff=0.8772;MQ=72.66;MQ0=0;MQRankSum=-4.796;QD=19.87;ReadPosRankSum=1.394;VQSLOD=4.6545;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:40.19:0,40,631	0/0:7,0:7:21.06:0,21,232	0/1:12,1:8:15.21:15,0,76	0/0:14,0:10:17.76:0,18,163	1/1:1,15:16:41.79:351,42,0	0/0:12,0:12:36.09:0,36,391	0/0:9,0:9:24.06:0,24,266	0/0:8,0:21:43.24:0,43,240	0/0:9,0:9:27.03:0,27,274	1/1:3,11:14:35.94:303,36,0	1/1:0,7:7:17.79:143,18,0	1/1:0,8:8:20.99:181,21,0	1/1:1,7:8:20.99:182,21,0	1/1:1,8:9:23.98:208,24,0	0/0:5,0:5:15:0,15,153	0/0:6,0:6:18.05:0,18,199	1/1:2,6:8:14.98:130,15,0	1/1:0,3:3:6:52,6,0	1/1:3,5:8:14.97:127,15,0	1/1:2,8:10:23.92:196,24,0	1/1:0,6:6:15:130,15,0	1/1:0,4:4:12:104,12,0	1/1:0,11:11:26.99:234,27,0	1/1:0,4:5:9:78,9,0	1/1:2,9:11:26.99:234,27,0	1/1:0,18:18:53.08:435,53,0	1/1:1,12:13:29.99:260,30,0	1/1:0,9:9:26.99:234,27,0
chr10	48666939	.	C	CT	1053.99	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=-2.472;DP=328;FS=0.679;HRun=8;HaplotypeScore=36.1458;InbreedingCoeff=0.8057;MQ=81.54;MQ0=0;MQRankSum=-2.217;QD=18.17;ReadPosRankSum=-1.419;VQSLOD=2.5474;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:51.03:0,51,467	0/0:2,0:2:6:0,6,55	0/1:12,0:13:6.59:7,0,131	0/0:8,0:8:11.74:0,12,83	0/0:12,0:12:30.01:0,30,274	0/0:20,0:20:54.01:0,54,486	0/0:11,0:11:30:0,30,270	0/0:23,1:24:10.35:0,10,340	0/0:9,0:9:21:0,21,192	0/0:12,0:12:32.96:0,33,292	0/0:10,0:10:20.12:0,20,155	0/0:10,0:10:24:0,24,216	0/0:7,0:7:18.01:0,18,165	0/0:9,0:9:24.01:0,24,220	0/0:7,0:7:15.01:0,15,137	0/0:7,0:7:21.01:0,21,192	0/0:20,0:20:47.35:0,47,409	0/0:10,0:10:27:0,27,243	1/1:4,15:19:48.14:554,48,0	1/1:2,6:8:24.02:253,24,0	1/1:0,3:3:9.03:104,9,0	0/0:7,0:7:14.95:0,15,129	0/0:17,0:17:36:0,36,329	0/0:9,0:9:23.99:0,24,215	0/0:13,0:13:26.99:0,27,240	0/0:13,0:13:33.02:0,33,302	1/1:4,10:14:10.87:292,11,0	0/0:15,0:15:45.02:0,45,412
chr10	48666983	.	T	TA	722.13	PASS	AB=0.827;AC=9;AF=0.167;AN=54;BaseQRankSum=0.322;DP=305;FS=7.817;HRun=10;HaplotypeScore=33.1952;InbreedingCoeff=0.5814;MQ=71.61;MQ0=0;MQRankSum=0.632;QD=10.78;ReadPosRankSum=-1.437;VQSLOD=1.0476;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:68.86:0,69,559	0/0:2,0:2:5.99:0,6,49	0/0:8,0:7:0.59:0,1,3	./.	0/0:11,0:11:20.95:0,21,168	0/0:20,0:20:50.91:0,51,415	0/0:14,0:14:35.95:0,36,296	0/0:23,0:23:47.89:0,48,392	0/0:8,0:8:23.96:0,24,195	0/0:11,0:12:31.96:0,32,246	0/0:8,0:8:23.93:0,24,191	0/0:10,0:10:26.95:0,27,219	0/0:3,0:3:5.99:0,6,49	0/0:12,0:12:29.95:0,30,246	0/0:10,0:10:23.97:0,24,197	0/0:8,0:8:23.97:0,24,197	0/0:11,0:11:29.87:0,30,235	0/0:6,0:6:17.95:0,18,143	1/1:4,11:15:33.08:352,33,0	1/1:1,9:10:24.06:256,24,0	0/1:2,3:5:10.73:11,0,40	0/0:5,1:6:14.90:0,15,112	0/0:6,0:6:11.98:0,12,98	0/1:12,1:13:2.05:2,0,189	0/1:12,1:13:8.05:8,0,140	0/0:13,0:14:40.99:0,41,326	1/1:5,6:10:24.04:242,24,0	0/0:16,0:16:17.85:0,18,148
chr10	48667212	.	GAA	G	2663.76	PASS	AB=0.988;AC=19;AF=0.352;AN=54;BaseQRankSum=1.968;DP=478;FS=2.066;HRun=4;HaplotypeScore=81.5535;InbreedingCoeff=0.5552;MQ=68.49;MQ0=12;MQRankSum=-4.361;QD=15.58;ReadPosRankSum=0.985;VQSLOD=0.2313;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:25:23.22:0,23,363	0/0:6,0:6:18.06:0,18,323	0/0:40,0:25:49.68:0,50,627	0/0:33,0:18:27.26:0,27,346	1/1:19,1:20:39.06:529,39,0	0/0:18,0:18:50.95:0,51,766	0/0:25,0:25:60.09:0,60,1031	0/0:20,0:16:47.91:0,48,597	0/0:20,0:20:57.19:0,57,951	0/1:16,0:14:20.53:357,0,21	1/1:9,1:9:17.89:214,18,0	0/1:22,0:19:15.75:16,0,527	0/0:14,0:14:6.86:0,7,482	1/1:6,0:6:18.05:242,18,0	0/0:21,0:21:57.18:0,57,923	0/0:22,0:22:61.09:0,61,1068	1/1:16,1:17:39.08:527,39,0	1/1:11,0:11:18.02:203,18,0	0/0:11,0:11:26:0,26,269	0/1:15,0:14:35.75:36,0,142	0/0:9,0:9:24.07:0,24,332	0/1:14,1:14:42.45:42,0,344	0/0:18,0:17:3.67:0,4,365	0/0:19,0:19:24.30:0,24,709	./.	1/1:12,0:11:29.76:314,30,0	0/1:19,0:17:99:141,0,286	1/1:8,0:8:18.05:239,18,0
chr10	48667214	.	A	AG	3131.36	PASS	AB=0.855;AC=21;AF=0.389;AN=54;BaseQRankSum=1.728;DP=502;FS=2.053;HRun=0;HaplotypeScore=76.2749;InbreedingCoeff=0.4299;MQ=61.88;MQ0=16;MQRankSum=-2.527;QD=14.36;ReadPosRankSum=1.082;VQSLOD=5.1108;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:27:8.43:0,8,241	0/0:6,0:6:18.06:0,18,252	0/0:35,0:20:44.63:0,45,623	0/0:31,0:16:28.31:0,28,349	1/1:4,16:20:39.06:531,39,0	0/0:18,0:18:49.40:0,49,656	0/0:23,0:23:64.79:0,65,880	0/0:23,0:19:30.16:0,30,569	0/0:20,1:21:60.18:0,60,805	0/1:6,12:14:22.45:361,0,22	1/1:4,7:10:17.89:232,18,0	0/1:20,2:19:49.86:50,0,452	0/1:15,1:15:23.55:24,0,443	1/1:0,6:6:18.06:259,18,0	0/0:24,0:22:57.17:0,57,766	0/0:20,0:21:63.19:0,63,861	1/1:4,13:17:35.18:517,35,0	1/1:2,9:12:21.06:281,21,0	0/0:17,0:16:24.23:0,24,243	0/1:14,2:15:76.31:76,0,123	0/0:10,0:9:19.46:0,19,312	0/1:16,1:15:59.32:59,0,303	0/1:18,1:18:15.37:15,0,349	0/0:20,1:19:6.87:0,7,623	./.	1/1:3,9:11:30.06:425,30,0	0/1:13,7:17:99:236,0,274	1/1:4,8:8:18.06:261,18,0
chr10	48667252	.	AGAGGAAGAGGAAGAGGAAGAG	A	3180.59	PASS	AB=0.959;AC=19;AF=0.365;AN=52;BaseQRankSum=2.859;DP=681;FS=18.252;HRun=0;HaplotypeScore=211.8392;InbreedingCoeff=-0.4180;MQ=32.78;MQ0=158;MQRankSum=-0.199;QD=6.49;ReadPosRankSum=1.010;VQSLOD=1.3166;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:39,0:24:57.08:57,0,314	0/0:7,0:7:18.03:0,18,268	./.	./.	0/1:27,0:19:99:318,0,390	0/0:21,0:12:23.74:0,24,566	0/0:28,0:19:54.11:0,54,1254	0/0:29,0:19:54.17:0,54,1105	0/0:25,0:22:60.16:0,60,1654	0/1:38,0:20:99:313,0,592	0/1:18,0:13:31.65:32,0,464	0/1:25,0:19:60.48:412,0,60	0/1:33,0:16:99:430,0,361	0/1:10,0:3:21.30:21,0,60	0/0:30,0:23:44.87:0,45,1152	0/0:33,0:30:87.26:0,87,2152	0/1:34,0:11:99:227,0,174	0/1:16,0:8:63.32:194,0,63	0/1:19,0:11:94.22:94,0,420	0/1:20,7:16:45.71:46,0,235	0/1:10,0:3:50.12:51,0,50	0/1:26,7:19:77.54:78,0,376	0/1:18,10:14:96.62:97,0,111	1/1:36,0:14:18.11:219,18,0	0/0:18,0:8:9.03:0,9,201	0/1:19,0:12:99:126,0,481	0/1:32,0:20:99:378,0,409	0/1:42,0:16:99:247,0,192
chr10	48668935	.	AAAAAAAGAAG	A	8014.20	PASS	AB=0.570;AC=34;AF=0.607;AN=56;BaseQRankSum=10.593;DP=617;FS=22.854;HRun=0;HaplotypeScore=147.1844;InbreedingCoeff=0.6382;MQ=46.52;MQ0=39;MQRankSum=-3.188;QD=19.45;ReadPosRankSum=3.435;VQSLOD=2.5360;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:28:62.84:0,63,1708	0/0:6,0:6:15.05:0,15,655	0/0:40,0:6:12.51:0,13,352	0/0:36,0:3:5.19:0,5,92	1/1:0,26:26:60.03:1119,60,0	0/0:21,0:20:54.04:0,54,1719	0/0:21,0:20:47.92:0,48,1199	0/1:9,0:19:14.11:14,0,95	0/0:17,0:17:49.85:0,50,1695	1/1:3,21:24:65.02:1226,65,0	1/1:1,19:19:30.08:667,30,0	1/1:2,0:18:3.69:53,4,0	1/1:3,0:12:3.62:57,4,0	0/1:4,17:21:7.65:245,0,8	0/0:20,0:20:50.07:0,50,1155	0/0:14,0:14:42.10:0,42,1232	1/1:3,28:30:19.41:674,19,0	1/1:2,18:18:8.98:196,9,0	1/1:3,0:18:40.33:460,40,0	1/1:2,0:20:21.59:175,22,0	0/1:3,0:17:1.41:31,0,1	1/1:0,0:10:1.85:62,2,0	1/1:4,0:22:13.27:114,13,0	0/1:4,0:22:0.28:95,0,0	1/1:2,18:19:9.02:257,9,0	1/1:5,35:38:92.09:1949,92,0	1/1:3,0:28:24.08:531,24,0	1/1:5,6:8:2.93:88,3,0
chr10	48670929	.	T	TA	1500.11	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=0.126;DP=630;FS=3.865;HRun=11;HaplotypeScore=70.2580;InbreedingCoeff=0.9693;MQ=64.62;MQ0=17;MQRankSum=0.432;QD=17.05;ReadPosRankSum=-2.479;VQSLOD=3.7498;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:65.72:0,66,510	0/0:8,0:8:20.92:0,21,162	0/0:74,0:21:17.10:0,17,114	0/0:73,0:19:15.31:0,15,167	0/0:23,0:23:59.75:0,60,460	0/0:16,1:17:14.39:0,14,295	0/0:12,0:12:26.88:0,27,207	0/0:39,0:39:75.66:0,76,616	0/0:14,0:15:40.83:0,41,300	0/0:26,0:26:62.21:0,62,467	0/0:21,1:23:31.35:0,31,414	0/0:18,0:18:41.61:0,42,331	0/0:13,0:13:32.80:0,33,248	0/0:8,0:8:20.87:0,21,158	0/0:21,0:21:56.77:0,57,439	0/0:12,0:12:35.86:0,36,277	0/0:32,0:32:74.67:0,75,574	0/0:17,0:17:41.74:0,42,313	1/1:9,27:35:63.04:609,63,0	1/1:0,19:20:53.84:507,54,0	1/1:1,7:8:18.03:179,18,0	0/0:5,0:5:11.93:0,12,93	0/0:13,0:13:32.87:0,33,255	0/0:8,0:7:14.91:0,15,114	0/0:25,0:25:65.56:0,66,504	0/0:20,0:20:53.78:0,54,416	1/1:6,18:24:35.93:365,36,0	0/0:10,0:10:23.87:0,24,185
chr10	48672604	.	TCTCCC	T	4563.72	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=12.007;DP=593;FS=0.455;HRun=0;HaplotypeScore=116.9706;InbreedingCoeff=0.9967;MQ=92.51;MQ0=0;MQRankSum=-6.727;QD=46.57;ReadPosRankSum=0.935;VQSLOD=5.0867;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,120,3410	0/0:8,0:8:24.08:0,24,738	0/0:37,0:35:74.80:0,75,1985	0/0:24,0:25:54.22:0,54,1568	0/0:19,0:19:54.19:0,54,1578	0/0:18,0:18:54.19:0,54,1522	0/0:20,0:20:54.19:0,54,1552	0/0:22,0:22:57.16:0,57,1546	0/0:19,0:19:57.17:0,57,1549	0/0:15,0:15:36.12:0,36,1072	0/0:9,0:9:18.06:0,18,480	0/0:30,0:30:84.29:0,84,2500	0/0:25,0:25:75.26:0,75,2246	0/0:24,0:24:72.22:0,72,2108	0/0:17,0:17:51.18:0,51,1508	0/0:13,0:13:33.07:0,33,864	0/0:25,0:25:72.22:0,72,2041	0/0:13,0:13:39.13:0,39,1195	1/1:4,13:17:42.14:863,42,0	1/1:4,15:19:39.10:767,39,0	1/1:2,22:24:45.15:882,45,0	0/0:13,0:13:33.11:0,33,973	0/0:17,0:17:42.14:0,42,1249	0/0:32,0:32:87.30:0,87,2629	0/0:21,0:21:54.19:0,54,1583	0/0:21,0:21:63.21:0,63,1853	1/1:4,34:38:99:2051,99,0	0/0:10,0:10:27.08:0,27,760
chr10	48672987	.	AAAGG	A	3905.87	PASS	AB=1.000;AC=19;AF=0.365;AN=52;BaseQRankSum=5.996;DP=640;FS=5.476;HRun=0;HaplotypeScore=124.1123;InbreedingCoeff=0.8013;MQ=58.53;MQ0=1;MQRankSum=-0.022;QD=15.14;ReadPosRankSum=3.219;VQSLOD=3.1062;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:53.34:0,53,1638	0/0:19,0:19:45.12:0,45,929	./.	./.	0/0:11,0:27:23.14:0,23,219	0/0:16,0:16:30.09:0,30,600	0/0:24,0:24:36.11:0,36,766	0/0:35,0:34:21.25:0,21,156	0/0:21,0:21:36.10:0,36,759	0/0:4,0:14:24.02:0,24,350	0/0:8,0:18:18.01:0,18,225	1/1:7,9:16:8.09:357,8,0	1/1:10,19:29:29.98:448,30,0	0/0:15,0:15:27.06:0,27,420	0/0:34,0:34:63.20:0,63,1360	1/1:11,24:35:38.92:611,39,0	0/0:13,0:26:5.98:0,6,72	0/0:8,0:17:3.01:0,3,52	0/1:23,0:23:7.15:132,0,7	1/1:29,0:29:39.67:375,40,0	1/1:29,0:29:0.89:2,1,0	1/1:2,16:18:36.01:508,36,0	1/1:5,16:21:32.91:490,33,0	1/1:11,25:36:48.16:753,48,0	0/0:10,0:24:9.02:0,9,115	0/0:4,0:22:49.62:0,50,755	1/1:22,0:22:6.09:230,6,0	0/0:4,0:7:5.89:0,6,67
chr10	48673026	.	GGAAA	G	2857.60	PASS	AB=1.000;AC=14;AF=0.250;AN=56;BaseQRankSum=13.765;DP=676;FS=6.486;HRun=0;HaplotypeScore=127.8250;InbreedingCoeff=0.4106;MQ=61.19;MQ0=8;MQRankSum=-2.543;QD=10.70;ReadPosRankSum=4.153;VQSLOD=2.1774;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,117,2236	0/0:19,0:19:57.13:0,57,1193	0/0:21,0:13:38.99:0,39,385	0/0:13,0:10:30.02:0,30,326	0/0:20,0:20:47.66:0,48,470	0/0:19,0:19:53.94:0,54,866	0/0:17,0:17:48.09:0,48,910	0/0:41,0:39:10.63:0,11,599	0/0:19,0:19:57.11:0,57,1071	0/0:23,0:22:59.73:0,60,674	0/0:21,0:21:33.50:0,34,521	0/1:20,0:20:99:130,0,162	0/1:29,0:29:99:132,0,204	0/0:21,0:21:38.99:0,39,751	0/0:35,0:35:96.65:0,97,1860	0/1:34,0:34:99:213,0,198	0/0:20,0:20:21.60:0,22,214	0/0:13,0:13:7.28:0,7,187	1/1:4,17:18:50.83:517,51,0	1/1:2,31:33:79.55:825,80,0	1/1:19,0:19:41.91:248,42,0	0/1:24,0:24:99:170,0,179	0/1:25,0:25:99:160,0,171	0/1:36,0:36:99:268,0,198	0/0:30,0:30:50.52:0,51,534	0/0:25,0:25:68.96:0,69,1152	1/1:1,25:26:21.07:374,21,0	0/0:11,0:11:22.16:0,22,239
chr10	48673316	.	T	TA	1955.03	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-8.388;DP=613;FS=8.306;HRun=8;HaplotypeScore=63.3709;InbreedingCoeff=0.9204;MQ=68.97;MQ0=0;MQRankSum=-0.642;QD=24.44;ReadPosRankSum=0.713;VQSLOD=4.2923;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,102,897	0/0:10,0:10:30.01:0,30,271	0/0:19,0:18:4.35:0,4,235	0/0:10,0:7:1.70:0,2,49	0/0:33,0:33:86.96:0,87,772	0/0:16,0:16:47.99:0,48,427	0/0:12,0:12:33.02:0,33,302	0/0:39,0:39:99:0,105,952	0/0:11,0:11:30.02:0,30,274	0/0:32,0:32:81.02:0,81,728	0/0:27,0:27:68.92:0,69,607	1/1:2,10:12:24.07:277,24,0	1/1:1,15:16:39.12:450,39,0	0/0:17,0:17:51:0,51,459	0/0:24,0:24:63:0,63,569	0/0:11,0:11:24.01:0,24,220	0/0:24,0:24:63:0,63,567	0/0:17,0:17:51:0,51,457	0/0:25,0:25:65.97:0,66,580	0/0:35,0:35:83.95:0,84,758	0/0:16,0:16:36.02:0,36,329	1/1:3,9:13:25.83:290,26,0	1/1:3,24:27:69.20:798,69,0	1/1:2,10:12:27.08:313,27,0	0/0:38,0:38:96.03:0,96,875	0/0:24,0:24:63.03:0,63,576	0/0:32,0:32:83.93:0,84,747	0/0:20,0:20:60.01:0,60,544
chr10	48674477	.	T	TGC	2824.72	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=2.426;DP=626;FS=6.765;HRun=0;HaplotypeScore=116.1874;InbreedingCoeff=0.7208;MQ=70.89;MQ0=5;MQRankSum=-1.293;QD=15.03;ReadPosRankSum=-0.288;VQSLOD=2.7593;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:68.94:0,69,718	0/0:11,0:11:30:0,30,282	0/0:15,0:12:1.85:0,2,22	0/0:14,0:12:5.10:0,5,53	0/0:22,0:22:32.35:0,32,288	0/0:20,0:20:56.58:0,57,605	0/0:36,0:36:81.11:0,81,899	0/1:25,0:25:40.06:132,0,40	0/0:15,0:15:33.02:0,33,376	0/0:31,0:31:70.84:0,71,559	0/0:13,0:13:20.89:0,21,164	1/1:20,11:32:8.02:781,8,0	1/1:3,12:15:1.16:268,1,0	0/0:25,0:24:41.60:0,42,320	0/0:27,0:28:56.90:0,57,594	0/0:20,0:20:42.02:0,42,428	0/0:39,0:39:96.98:0,97,760	0/0:21,0:21:44.76:0,45,354	1/1:20,0:20:32.21:265,32,0	1/1:15,0:15:3:26,3,0	0/0:30,0:29:0.47:0,0,1	1/1:4,22:26:42.14:697,42,0	1/1:13,6:19:5.93:351,6,0	1/1:5,20:25:15.98:435,16,0	0/0:18,0:17:38.94:0,39,320	0/0:35,0:35:83.49:0,83,684	1/1:11,0:11:5.53:51,6,0	0/0:11,0:11:20.96:0,21,171
chr10	48674486	.	GCA	G	3812.37	PASS	AB=0.928;AC=28;AF=0.519;AN=54;BaseQRankSum=0.064;DP=633;FS=3.881;HRun=0;HaplotypeScore=112.1087;InbreedingCoeff=0.2470;MQ=60.68;MQ0=7;MQRankSum=-0.379;QD=8.95;ReadPosRankSum=2.258;VQSLOD=3.4958;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:25,1:27:31.29:31,0,610	0/1:8,3:11:83.25:83,0,142	./.	0/0:15,0:9:2.19:0,2,74	1/1:6,13:19:24.07:278,24,0	0/0:24,0:24:25.41:0,25,647	0/1:29,4:33:3.45:3,0,799	0/1:19,1:20:60.55:61,0,107	0/0:14,0:14:16.23:0,16,438	1/1:15,11:29:44.52:419,45,0	1/1:1,10:12:17.89:188,18,0	0/0:31,0:31:11.22:0,11,241	0/1:16,0:16:4.07:4,0,55	1/1:7,16:23:26.91:292,27,0	0/1:21,4:25:30.03:30,0,582	0/1:15,3:18:4.67:5,0,369	1/1:9,27:41:76.41:799,76,0	1/1:5,15:20:33.06:368,33,0	0/0:11,0:29:32.62:0,33,210	0/0:7,0:19:5.90:0,6,42	0/0:12,0:35:5.96:0,6,45	0/1:25,0:25:16.96:17,0,31	0/1:19,0:19:19.60:20,0,64	0/1:26,0:26:35.14:78,0,35	1/1:3,11:16:29.75:307,30,0	1/1:10,20:33:60.39:621,60,0	0/0:10,0:23:9.05:0,9,73	1/1:1,10:11:18.05:209,18,0
chr10	48674716	.	GT	G	319.68	PASS	AB=0.931;AC=6;AF=0.107;AN=56;BaseQRankSum=4.874;DP=479;FS=2.270;HRun=12;HaplotypeScore=52.9584;InbreedingCoeff=0.2370;MQ=66.91;MQ0=1;MQRankSum=0.038;QD=3.90;ReadPosRankSum=-2.428;VQSLOD=-0.1832;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,1:25:42.54:0,43,572	0/0:6,0:4:12.02:0,12,122	0/1:12,0:10:7.33:7,0,69	0/0:12,0:11:11.57:0,12,86	0/0:17,0:16:36.06:0,36,359	0/0:22,0:26:47.93:0,48,471	0/1:13,3:16:27.63:28,0,287	1/1:4,18:22:26.34:388,26,0	0/0:19,0:20:47.91:0,48,455	0/0:20,1:21:18.84:0,19,369	0/0:13,1:15:2.98:0,3,239	0/0:15,1:16:18.83:0,19,355	0/0:16,0:16:36.07:0,36,365	0/0:12,0:15:29.71:0,30,263	0/0:11,0:11:30.06:0,30,305	0/0:16,0:16:45.07:0,45,447	0/0:23,0:23:59.97:0,60,578	0/0:14,1:18:16.92:0,17,329	0/0:17,0:17:41.91:0,42,406	0/0:12,0:7:12.02:0,12,122	0/0:20,1:21:21.81:0,22,387	0/0:10,0:10:27.05:0,27,274	0/0:18,0:16:29.73:0,30,272	0/0:14,0:16:47.76:0,48,455	0/1:10,0:8:6.98:7,0,107	0/0:22,1:25:42.68:0,43,576	0/1:19,3:22:12.66:13,0,401	0/0:13,1:17:21.11:0,21,302
chr10	48675009	.	CCAAAAAAAAAAAAAAAAAAAAAAAAAAA	C	2637.51	PASS	AB=0.969;AC=40;AF=0.800;AN=50;BaseQRankSum=2.561;DP=187;FS=2.298;HRun=0;HaplotypeScore=78.5740;InbreedingCoeff=-0.1397;MQ=36.42;MQ0=65;MQRankSum=4.039;QD=15.33;ReadPosRankSum=5.254;VQSLOD=0.6526;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:6,0:5:43.18:43,0,347	./.	./.	./.	1/1:2,0:1:3:27,3,0	0/1:6,0:5:39.27:39,0,601	0/1:3,0:2:13.84:14,0,285	0/1:8,0:3:16.66:17,0,136	0/1:4,0:3:2.97:43,0,3	1/1:2,0:2:5.99:50,6,0	1/1:9,0:7:20.98:185,21,0	0/1:4,2:4:99:422,0,149	1/1:5,0:2:5.94:41,6,0	1/1:3,0:1:3:25,3,0	1/1:4,0:2:6:54,6,0	0/0:2,0:1:3.01:0,3,281	1/1:14,0:9:9.79:82,10,0	1/1:6,0:4:8.94:65,9,0	1/1:12,0:5:14.97:123,15,0	1/1:8,0:8:23.92:193,24,0	1/1:3,0:2:5.99:49,6,0	1/1:3,0:2:6:52,6,0	1/1:3,8:11:7.94:606,8,0	1/1:13,1:8:14.65:297,15,0	0/1:5,0:4:18.42:18,0,372	1/1:13,0:8:23.91:207,24,0	1/1:2,0:2:6:52,6,0	0/1:21,0:9:69.07:69,0,292
chr10	48676592	.	CTGTGTGTGTGTGTGTGTGTGTGTGTGTG	C	1180.67	PASS	AB=1.000;AC=5;AF=0.093;AN=54;BaseQRankSum=4.375;DP=551;FS=8.701;HRun=0;HaplotypeScore=314.9845;InbreedingCoeff=0.4893;MQ=63.54;MQ0=24;MQRankSum=-3.756;QD=21.08;ReadPosRankSum=0.640;VQSLOD=1.0129;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:23:29.66:0,30,2094	0/0:4,0:4:3.01:0,3,121	0/0:21,0:12:3.85:0,4,22	0/0:28,0:22:0.17:0,0,49	0/0:18,0:19:36.12:0,36,2318	0/0:24,0:24:28.81:0,29,3009	0/0:28,0:25:49:0,49,2437	0/0:29,0:28:28.32:0,28,804	0/0:21,0:18:32.60:0,33,2079	0/0:14,0:14:24.08:0,24,1313	0/0:11,0:15:6.02:0,6,254	0/0:13,0:13:24.08:0,24,2175	0/0:18,0:17:18.06:0,18,1555	0/0:16,0:20:24.07:0,24,952	0/0:19,0:17:17.24:0,17,1251	0/0:13,0:13:12.04:0,12,694	0/0:27,0:31:36.07:0,36,1398	0/0:15,0:20:21.28:0,21,835	0/1:20,0:19:25.74:55,0,26	1/1:10,8:18:9.03:646,9,0	./.	0/0:12,0:19:21.99:0,22,1142	0/0:17,0:17:18.06:0,18,1603	0/0:29,0:28:21.06:0,21,1671	0/0:5,0:5:6.02:0,6,376	0/0:22,0:20:34.65:0,35,1876	1/1:10,7:18:9.03:594,9,0	0/0:14,0:10:14.54:0,15,955
chr10	48678030	.	A	AG	16783.84	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-16.304;DP=673;FS=0.957;HRun=3;HaplotypeScore=60.1568;InbreedingCoeff=0.9987;MQ=91.39;MQ0=0;MQRankSum=-4.088;QD=38.85;ReadPosRankSum=2.578;VQSLOD=5.0794;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:58:99:0,168,1992	0/0:7,0:7:18.06:0,18,216	0/0:31,0:31:84.23:0,84,988	0/0:22,0:22:53.54:0,54,632	1/1:1,31:32:93.29:1282,93,0	0/0:23,0:23:63.19:0,63,756	0/0:23,0:23:66.19:0,66,781	1/1:3,27:30:84.23:1154,84,0	0/0:27,0:27:78.24:0,78,935	1/1:1,24:25:69.18:927,69,0	1/1:0,17:17:42.14:586,42,0	1/1:1,23:24:60.20:840,60,0	1/1:0,24:24:72.24:1007,72,0	1/1:1,24:25:69.23:966,69,0	0/0:28,0:28:78.24:0,78,936	0/0:22,0:22:60.18:0,60,720	1/1:0,20:20:60.20:840,60,0	1/1:0,13:13:39.13:546,39,0	1/1:1,23:24:69.23:965,69,0	1/1:0,15:15:39.13:546,39,0	1/1:1,31:32:90.30:1260,90,0	1/1:0,28:28:78.26:1091,78,0	1/1:0,20:20:60.20:839,60,0	1/1:0,17:17:51.17:714,51,0	1/1:1,14:15:39.13:546,39,0	1/1:0,33:33:96.25:1287,96,0	1/1:0,24:24:63.21:882,63,0	1/1:0,14:14:36.12:504,36,0
chr10	48678853	.	G	GA	4565.67	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=-10.069;DP=624;FS=1.572;HRun=10;HaplotypeScore=71.3319;InbreedingCoeff=0.8744;MQ=60.67;MQ0=14;MQRankSum=2.255;QD=18.41;ReadPosRankSum=-0.112;VQSLOD=5.4540;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:55.93:0,56,478	0/0:10,0:10:29.96:0,30,246	0/1:22,0:9:11.83:16,0,12	0/0:16,0:6:9.45:0,9,74	1/1:4,21:25:10.79:501,11,0	0/0:27,0:28:70.93:0,71,569	0/0:20,0:21:52.94:0,53,421	0/0:33,0:27:47.62:0,48,519	0/0:16,0:17:46.98:0,47,375	1/1:7,22:29:41.49:632,41,0	1/1:7,13:20:5.39:251,5,0	0/0:13,0:13:17.97:0,18,148	0/0:15,0:15:23.97:0,24,197	1/1:5,23:29:59.98:622,60,0	0/0:17,0:18:49.97:0,50,400	0/0:17,1:18:6.90:0,7,257	1/1:8,29:38:43.85:671,44,0	1/1:2,17:19:26.48:487,26,0	0/0:23,0:22:53.93:0,54,442	0/0:21,0:20:50.93:0,51,418	0/0:16,0:15:35.95:0,36,296	0/0:29,0:28:65.88:0,66,542	0/0:24,1:26:51.42:0,51,525	0/0:17,1:18:12.97:0,13,313	1/1:2,21:25:56.84:573,57,0	1/1:10,23:33:41.50:638,41,0	0/0:26,1:28:35.95:0,36,491	1/1:1,5:7:17.88:174,18,0
chr10	48678883	.	AAGAC	A	1125.17	PASS	AB=1.000;AC=14;AF=0.250;AN=56;BaseQRankSum=0.557;DP=639;FS=0.536;HRun=0;HaplotypeScore=137.5703;InbreedingCoeff=0.6629;MQ=62.27;MQ0=5;MQRankSum=2.764;QD=6.70;ReadPosRankSum=-0.074;VQSLOD=2.4326;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:68.83:0,69,1053	0/0:7,0:7:15.01:0,15,161	1/1:27,0:14:1.55:4,2,0	0/0:13,0:10:9.02:0,9,94	0/0:25,0:25:33.16:0,33,295	0/0:26,0:26:41.81:0,42,422	0/0:18,0:18:23.71:0,24,183	0/0:37,0:35:32.62:0,33,247	0/1:22,0:21:3.98:4,0,255	0/0:34,0:34:69.10:0,69,752	0/0:14,0:14:20.99:0,21,228	1/1:3,6:9:3.01:48,3,0	1/1:20,0:20:5.98:51,6,0	0/0:20,0:20:32.97:0,33,354	0/0:18,0:18:36.01:0,36,402	0/0:20,0:20:20.97:0,21,220	0/0:35,0:35:71.63:0,72,649	0/0:31,0:29:11.60:0,12,531	0/0:28,0:26:2.18:0,2,133	0/0:21,0:21:17.86:0,18,133	0/0:12,0:12:5.88:0,6,43	1/1:8,19:26:50.52:393,51,0	1/1:24,1:24:45.04:505,45,0	1/1:19,0:19:25.63:238,26,0	0/0:36,0:36:72.83:0,73,821	0/0:33,0:33:73.32:0,73,918	0/1:19,0:19:47.63:48,0,104	0/0:9,0:9:23.68:0,24,262
chr10	48678907	.	CAGACAGAA	C	1008.76	PASS	AB=1.000;AC=10;AF=0.179;AN=56;BaseQRankSum=-0.224;DP=613;FS=1.092;HRun=0;HaplotypeScore=189.0019;InbreedingCoeff=0.3773;MQ=56.56;MQ0=4;MQRankSum=0.903;QD=8.01;ReadPosRankSum=0.676;VQSLOD=2.4305;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:98.94:0,99,1935	0/0:7,0:7:17.20:0,17,154	1/1:4,0:1:1.82:5,2,0	0/0:5,0:5:9.02:0,9,94	0/0:28,0:28:73.18:0,73,777	0/0:21,0:21:46.42:0,46,469	0/0:18,0:16:39.23:0,39,315	0/0:26,0:24:34.69:0,35,266	0/0:24,0:23:54.89:0,55,682	0/0:29,0:29:71.91:0,72,939	0/0:20,0:19:47.88:0,48,597	0/1:10,0:10:9.01:9,0,83	1/1:3,18:21:5.14:134,5,0	0/0:20,0:20:49.30:0,49,538	0/0:21,0:21:56.25:0,56,578	0/0:17,0:17:21.46:0,21,245	0/0:38,0:38:99:0,104,1110	0/0:31,0:29:40.11:0,40,658	0/0:21,0:19:9.54:0,10,163	0/0:28,0:28:17.86:0,18,133	0/0:9,0:9:6.68:0,7,65	0/1:28,0:27:99:202,0,291	0/1:25,0:24:99:196,0,289	1/1:19,1:20:47.40:546,47,0	0/0:42,0:42:99:0,108,1340	0/0:35,0:35:99:0,104,1178	0/1:18,0:18:58.56:59,0,118	0/0:13,0:13:38.60:0,39,309
chr10	48678911	.	CAGAAAGAAAGAAAGAA	C	1103.82	PASS	AB=1.000;AC=9;AF=0.180;AN=50;BaseQRankSum=5.419;DP=618;FS=6.981;HRun=0;HaplotypeScore=292.6052;InbreedingCoeff=0.7759;MQ=55.70;MQ0=4;MQRankSum=-7.241;QD=12.69;ReadPosRankSum=-2.503;VQSLOD=1.2079;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:87.28:0,87,3182	0/0:6,0:6:9.03:0,9,338	./.	./.	0/0:30,0:30:60.03:0,60,2050	0/0:21,0:21:42.09:0,42,1039	0/0:17,0:15:25.55:0,26,447	1/1:10,0:19:13.71:96,14,0	0/0:24,0:23:63.19:0,63,1718	0/0:32,0:32:72.22:0,72,2169	0/0:19,0:19:51.13:0,51,1736	0/0:12,0:12:21.07:0,21,644	0/0:19,0:19:8.48:0,8,58	0/0:21,0:21:36.12:0,36,1514	0/0:20,0:20:48.15:0,48,1604	0/0:6,0:18:9.49:0,9,187	0/0:41,0:41:78.26:0,78,2620	0/0:33,0:31:75.01:0,75,2031	1/1:8,0:15:9.02:200,9,0	./.	1/1:9,0:9:3.67:32,4,0	0/0:28,0:27:53.32:0,53,1227	0/0:26,0:25:51.14:0,51,1452	0/1:20,0:20:6.33:6,0,459	0/0:42,0:42:89.32:0,89,3115	0/0:37,0:37:93.30:0,93,3077	1/1:20,0:20:36.12:913,36,0	0/0:13,0:13:36.07:0,36,1123
chr10	48679966	.	GT	G	778.36	PASS	AB=0.915;AC=23;AF=0.411;AN=56;BaseQRankSum=7.616;DP=578;FS=7.688;HRun=15;HaplotypeScore=73.4534;InbreedingCoeff=0.5445;MQ=61.80;MQ0=6;MQRankSum=-0.873;QD=2.84;ReadPosRankSum=0.331;VQSLOD=-0.3703;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:41,3:43:2.28:2,0,549	0/0:6,0:6:14.99:0,15,129	0/0:16,0:7:8.98:0,9,74	0/1:14,1:11:4.24:4,0,47	0/1:25,3:29:10.11:10,0,263	0/0:18,1:18:19.72:0,20,294	0/0:22,3:25:12.38:0,12,347	0/1:36,0:35:99:113,0,104	0/0:15,3:19:6:0,6,266	0/0:21,4:25:15.35:0,15,369	0/0:17,3:21:5.52:0,6,270	1/1:3,0:14:12.20:35,12,0	1/1:6,0:18:16.76:50,17,0	0/0:18,1:19:13.67:0,14,225	0/0:28,1:28:37.67:0,38,444	0/0:12,1:12:7.73:0,8,192	0/0:34,3:36:25.93:0,26,560	0/0:27,0:27:62.98:0,63,550	1/1:16,6:22:11.69:152,12,0	1/1:8,11:19:9.95:187,10,0	1/1:3,2:4:2.93:19,3,0	1/1:4,1:9:6.94:31,7,0	1/1:8,0:14:4.49:29,4,0	1/1:3,0:13:14.80:45,15,0	0/0:18,1:20:25.55:0,26,332	0/0:26,1:27:31.25:0,31,369	1/1:5,15:20:23.90:279,24,0	0/1:8,2:11:11.70:12,0,146
chr10	48679981	.	TA	T	667.40	PASS	AB=0.929;AC=3;AF=0.054;AN=56;BaseQRankSum=2.624;DP=563;FS=1.415;HRun=3;HaplotypeScore=72.0155;InbreedingCoeff=0.5819;MQ=57.42;MQ0=10;MQRankSum=-4.210;QD=13.09;ReadPosRankSum=-2.452;VQSLOD=1.5798;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:41:95.90:0,96,974	0/0:8,0:8:24.04:0,24,255	0/0:18,0:5:11.91:0,12,98	0/1:12,0:9:17.91:18,0,43	0/0:24,0:24:58.97:0,59,528	0/0:21,0:20:52.36:0,52,565	0/0:24,0:24:54.51:0,55,659	1/1:24,14:36:78.46:755,78,0	0/0:18,0:18:39.15:0,39,443	0/0:24,0:24:53.78:0,54,578	0/0:22,0:22:57.37:0,57,618	0/0:16,0:15:29.41:0,29,216	0/0:16,0:16:23.17:0,23,187	0/0:16,0:16:38.57:0,39,406	0/0:24,0:24:68.62:0,69,748	0/0:16,0:14:38.51:0,39,379	0/0:41,0:40:97.74:0,98,991	0/0:28,0:28:72.13:0,72,814	0/0:14,0:13:20.54:0,21,117	0/0:22,0:22:27.72:0,28,222	0/0:3,0:2:2.37:0,2,8	0/0:8,0:8:22.83:0,23,159	0/0:14,0:13:35.57:0,36,267	0/0:13,0:12:22.54:0,23,133	0/0:19,0:19:52.74:0,53,543	0/0:23,0:23:62.62:0,63,664	0/0:24,0:23:36.60:0,37,194	0/0:12,0:12:32.72:0,33,317
chr10	48680019	.	T	TC	2297.85	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=9.014;DP=537;FS=10.685;HRun=0;HaplotypeScore=64.3108;InbreedingCoeff=0.9644;MQ=60.63;MQ0=1;MQRankSum=-10.613;QD=36.47;ReadPosRankSum=0.052;VQSLOD=2.4596;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:35:99:0,102,1370	0/0:12,0:12:36.12:0,36,501	0/0:17,0:14:42.14:0,42,587	0/0:8,0:5:15.05:0,15,198	0/0:21,0:21:63.21:0,63,881	0/0:19,0:19:51.16:0,51,696	0/0:28,0:28:81.22:0,81,1096	0/0:26,0:26:75.25:0,75,1049	0/0:14,0:14:42.14:0,42,587	0/0:16,0:16:48.16:0,48,671	0/0:27,0:27:78.21:0,78,1054	0/0:15,0:15:32.98:0,33,461	0/0:19,0:19:54.10:0,54,712	0/0:15,0:15:45.15:0,45,629	0/0:30,0:30:90.29:0,90,1243	0/0:16,0:16:45.14:0,45,614	0/0:31,0:31:78.24:0,78,1072	0/0:31,0:30:84.28:0,84,1174	1/1:4,11:15:42.12:576,42,0	1/1:0,23:23:63.21:940,63,0	1/1:0,3:2:6.02:90,6,0	0/0:21,0:21:63.17:0,63,859	0/0:13,0:13:39.12:0,39,528	0/0:20,0:20:48.15:0,48,654	0/0:12,0:12:30.10:0,30,420	0/0:19,0:19:57.19:0,57,797	1/1:1,21:21:57.19:846,57,0	0/0:8,0:8:21.07:0,21,294
chr10	48680155	.	G	GT	3031.23	PASS	AB=0.719;AC=34;AF=0.607;AN=56;BaseQRankSum=-0.464;DP=589;FS=0.419;HRun=14;HaplotypeScore=75.3937;InbreedingCoeff=0.4282;MQ=60.57;MQ0=16;MQRankSum=-0.045;QD=7.07;ReadPosRankSum=-2.143;VQSLOD=2.2112;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,2:34:11.58:0,12,270	0/0:8,0:8:18.50:0,19,112	0/0:21,0:9:12.72:0,13,75	0/0:8,1:3:4.88:0,5,20	1/1:9,18:27:8.03:291,8,0	0/0:21,2:21:11.09:0,11,188	0/0:22,3:27:24.65:0,25,265	0/1:12,9:20:22:178,0,22	0/0:13,0:13:6.48:0,6,155	0/1:7,16:24:0.41:264,0,0	1/1:7,10:20:7.40:182,7,0	1/1:4,2:16:17.36:108,17,0	1/1:9,7:17:1.09:90,1,0	1/1:9,12:21:4.44:197,4,0	0/1:27,2:28:20.19:20,0,265	0/0:16,0:20:46.50:0,46,270	0/1:14,22:36:29.97:266,0,30	1/1:8,11:19:32.94:282,33,0	1/1:4,4:11:23.49:166,23,0	1/1:6,5:31:46.51:268,47,0	1/1:8,1:10:9.30:65,9,0	1/1:5,3:16:10.85:105,11,0	1/1:6,4:25:26.35:174,26,0	1/1:7,2:15:17.36:109,17,0	0/1:10,13:24:46.86:98,0,47	0/1:24,4:29:26.67:155,0,27	1/1:8,1:23:31.66:178,32,0	1/1:3,2:5:3:26,3,0
chr10	48684242	.	C	CA	1302.03	PASS	AB=0.802;AC=25;AF=0.446;AN=56;BaseQRankSum=-0.268;DP=498;FS=22.868;HRun=16;HaplotypeScore=71.1329;InbreedingCoeff=0.3948;MQ=55.20;MQ0=38;MQRankSum=-1.978;QD=4.47;ReadPosRankSum=-1.497;VQSLOD=-0.2878;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:16,12:28:14.57:249,15,0	0/0:9,0:5:11.69:0,12,67	1/1:11,0:5:6.69:19,7,0	0/0:12,0:8:7.44:0,7,36	0/1:14,5:20:7.47:55,0,7	0/0:21,0:22:31.49:0,31,205	0/0:16,0:14:14.42:0,14,83	0/0:22,1:22:25.01:0,25,138	0/0:13,0:13:18.62:0,19,91	1/1:8,9:18:6.74:158,7,0	0/1:14,4:16:11.84:56,0,12	0/1:10,1:12:10.99:45,0,11	0/0:11,0:7:17.51:0,18,100	1/1:10,4:14:11.92:90,12,0	0/0:18,0:17:20.30:0,20,97	0/0:14,0:16:27.46:0,27,145	0/1:13,15:26:11.25:188,0,11	0/1:17,8:17:19.08:128,0,19	1/1:10,0:12:11.32:56,11,0	1/1:9,0:13:12.64:70,13,0	1/1:4,0:6:5.68:28,6,0	0/0:16,0:13:19.42:0,19,106	0/0:13,0:16:14.79:0,15,67	0/0:24,0:27:37.21:0,37,188	0/1:9,6:16:14.52:165,0,15	1/1:18,8:26:0.53:120,1,0	0/1:20,0:18:6.25:43,0,6	1/1:8,0:5:2.96:19,3,0
chr10	48687699	.	A	ACAGTGACGCCATCTGC	8115.17	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=1.935;DP=627;FS=3.675;HRun=0;HaplotypeScore=261.3490;InbreedingCoeff=0.9853;MQ=82.51;MQ0=2;MQRankSum=-10.418;QD=88.21;ReadPosRankSum=-0.207;VQSLOD=4.1447;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,123,5107	0/0:8,0:8:21.07:0,21,994	0/0:18,0:18:51.13:0,51,1800	0/0:26,0:25:70.76:0,71,2476	0/0:21,0:21:63.22:0,63,2812	0/0:22,0:22:63.22:0,63,2970	0/0:25,0:25:75.24:0,75,2916	0/0:26,0:26:75.25:0,75,3072	0/0:18,0:18:48.16:0,48,2252	0/0:28,0:28:84.29:0,84,3782	0/0:17,0:17:51.16:0,51,2187	0/0:26,0:26:75.24:0,75,3011	0/0:21,0:21:60.19:0,60,2669	0/0:28,0:28:84.29:0,84,3333	0/0:13,0:13:39.12:0,39,1725	0/0:16,0:16:48.16:0,48,2068	0/0:27,0:27:78.27:0,78,3435	0/0:19,0:19:51.16:0,51,1999	1/1:13,4:18:51.17:2856,51,0	1/1:14,7:21:17.74:1202,18,0	1/1:20,5:34:17.38:1150,17,0	0/0:19,0:19:54.19:0,54,2499	0/0:20,0:20:57.20:0,57,2470	0/0:25,0:25:69.22:0,69,3014	0/0:28,0:28:81.28:0,81,3563	0/0:34,0:34:93.30:0,93,3774	1/1:14,4:18:42.14:2906,42,0	0/0:4,0:4:12.04:0,12,568
chr10	48688293	.	AAC	A	1493.19	PASS	AB=0.790;AC=27;AF=0.519;AN=52;BaseQRankSum=6.440;DP=575;FS=6.820;HRun=0;HaplotypeScore=83.7835;InbreedingCoeff=0.4345;MQ=70.64;MQ0=8;MQRankSum=-2.354;QD=4.65;ReadPosRankSum=3.409;VQSLOD=1.6594;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:41.89:0,42,508	0/0:5,0:5:8.69:0,9,80	./.	./.	1/1:6,6:13:5.99:66,6,0	0/1:25,3:28:17.59:18,0,479	0/0:14,3:17:12.02:0,12,156	0/0:14,0:14:5.47:0,5,27	0/0:20,0:20:15.50:0,16,195	1/1:15,7:22:14.99:143,15,0	1/1:8,2:10:1.05:117,1,0	0/1:11,0:20:14.56:30,0,15	1/1:8,0:24:28.40:140,28,0	0/1:17,9:25:32.79:87,0,33	0/0:12,0:13:0.85:0,1,136	0/1:13,2:15:8.84:9,0,237	1/1:16,13:29:33.56:362,34,0	1/1:12,13:25:18.05:197,18,0	0/0:16,0:21:23.87:0,24,222	0/0:6,0:13:15.01:0,15,145	0/0:35,0:39:47.53:0,48,512	1/1:13,0:16:10.27:43,10,0	1/1:6,0:9:2.84:14,3,0	1/1:18,0:33:25.57:126,26,0	1/1:9,1:10:3.01:33,3,0	0/1:17,9:25:18.76:199,0,19	0/0:14,0:20:9:0,9,98	1/1:3,10:14:11.70:94,12,0
chr10	48688531	.	CGGAGCAGG	C	2983.75	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=10.345;DP=665;FS=0.000;HRun=0;HaplotypeScore=167.6497;InbreedingCoeff=0.8514;MQ=71.30;MQ0=1;MQRankSum=-9.395;QD=27.13;ReadPosRankSum=-0.368;VQSLOD=2.8596;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,120,4414	0/0:4,0:4:12.01:0,12,412	0/0:10,0:10:20.86:0,21,676	0/1:13,0:12:22.74:23,0,336	0/0:13,0:13:33.11:0,33,1247	0/0:24,0:23:69.24:0,69,2886	0/0:32,0:32:90.31:0,90,3610	0/0:23,0:23:54.19:0,54,1893	0/0:32,0:32:87.29:0,87,3247	0/0:20,0:20:54.16:0,54,2014	0/0:8,0:8:21.07:0,21,743	0/0:36,0:36:99:0,102,4009	0/0:24,0:24:63.22:0,63,2626	0/0:45,0:45:99:0,126,5043	0/0:28,0:28:72.24:0,72,2752	0/0:25,0:25:69.24:0,69,2600	0/0:32,0:32:84.29:0,84,3376	0/0:40,0:40:96.33:0,96,3887	1/1:6,12:18:36.12:809,36,0	1/1:2,18:20:36.12:858,36,0	1/1:8,29:37:24.90:595,25,0	0/0:15,0:15:39.13:0,39,1406	0/0:9,0:9:27.09:0,27,1091	0/0:39,0:39:99:0,99,3750	0/0:17,0:17:48.16:0,48,1987	0/0:31,0:31:87.30:0,87,3172	1/1:4,18:22:33.11:865,33,0	0/0:4,0:4:12.04:0,12,520
chr10	48688767	.	GTCTT	G	4610	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=12.451;DP=740;FS=0.429;HRun=0;HaplotypeScore=122.4750;InbreedingCoeff=0.9999;MQ=77.27;MQ0=0;MQRankSum=-2.926;QD=45.20;ReadPosRankSum=3.205;VQSLOD=5.1769;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,151,4063	0/0:11,0:11:33.11:0,33,874	0/0:17,0:17:42.12:0,42,1056	0/0:24,0:24:57.56:0,58,1493	0/0:37,0:37:99:0,108,2948	0/0:28,0:28:84.29:0,84,2270	0/0:22,0:22:63.22:0,63,1726	0/0:38,0:38:99:0,108,2875	0/0:30,0:30:87.30:0,87,2366	0/0:33,0:33:99:0,99,2714	0/0:20,0:20:60.21:0,60,1637	0/0:22,0:22:66.23:0,66,1803	0/0:25,0:25:75.26:0,75,2053	0/0:21,0:21:63.22:0,63,1699	0/0:14,0:15:42.14:0,42,1121	0/0:27,0:27:78.23:0,78,1939	0/0:38,0:38:99:0,111,2939	0/0:20,0:20:60.14:0,60,1505	1/1:1,16:17:48.15:868,48,0	1/1:1,26:27:69.19:1299,69,0	1/1:0,35:35:72.25:1396,72,0	0/0:34,0:34:99:0,99,2683	0/0:27,0:27:78.27:0,78,2136	0/0:29,0:29:84.27:0,84,2236	0/0:17,0:17:51.17:0,51,1347	0/0:33,0:33:99:0,99,2700	1/1:3,20:23:54.19:1046,54,0	0/0:20,0:20:60.20:0,60,1593
chr10	48690013	.	CGTGTGT	C	1725.78	PASS	AC=18;AF=0.346;AN=52;BaseQRankSum=5.688;DP=526;FS=1.585;HRun=0;HaplotypeScore=113.9046;InbreedingCoeff=0.8467;MQ=57.48;MQ0=19;MQRankSum=-3.257;QD=8.94;ReadPosRankSum=-0.352;VQSLOD=2.3648;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:41:48.15:0,48,1229	0/0:12,0:12:21.96:0,22,492	./.	./.	1/1:15,9:24:18.06:333,18,0	0/0:18,0:18:18.03:0,18,466	0/0:14,0:15:11.15:0,11,273	0/0:24,0:24:14.97:0,15,172	0/0:20,0:19:24.08:0,24,710	1/1:21,5:25:7.26:149,7,0	1/1:12,6:19:9.03:162,9,0	0/0:9,0:11:5.16:0,5,78	0/0:9,0:11:12.04:0,12,183	1/1:8,3:11:6.02:121,6,0	0/0:16,0:16:24.08:0,24,745	0/0:11,0:11:21.06:0,21,469	1/1:19,12:32:24.02:393,24,0	1/1:16,6:22:3.89:63,4,0	0/0:20,0:18:24.08:0,24,612	0/0:16,0:17:24.08:0,24,619	0/0:13,0:16:6.02:0,6,175	0/0:9,0:13:15.03:0,15,207	0/0:14,0:18:14.20:0,14,197	0/0:11,0:20:24.06:0,24,293	1/1:12,9:24:15.93:268,16,0	1/1:14,7:21:17.09:303,17,0	0/0:12,0:16:12.04:0,12,292	1/1:9,4:13:6.02:122,6,0
chr10	48691540	.	GA	G	2721.39	PASS	AB=0.785;AC=26;AF=0.464;AN=56;BaseQRankSum=7.021;DP=550;FS=1.922;HRun=13;HaplotypeScore=66.0571;InbreedingCoeff=0.3671;MQ=55.31;MQ0=15;MQRankSum=2.263;QD=7.69;ReadPosRankSum=3.667;VQSLOD=2.7208;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,1:35:51.41:0,51,475	0/0:5,0:5:9.89:0,10,85	0/1:16,0:3:1.45:2,0,1	0/1:28,0:4:0:0,0,0	1/1:8,22:32:56.67:382,57,0	0/0:19,0:19:38.90:0,39,364	0/1:11,2:11:4.16:4,0,119	0/0:23,0:22:9.73:0,10,241	0/0:15,1:16:2.13:0,2,183	0/1:8,6:16:7.22:99,0,7	0/1:9,14:23:22.75:145,0,23	0/0:21,0:21:17.94:0,18,323	0/0:11,0:11:20.91:0,21,182	1/1:4,3:9:24.33:149,24,0	0/0:24,2:26:1.24:0,1,327	0/0:16,0:16:17.17:0,17,328	1/1:5,24:32:42.50:448,42,0	1/1:14,12:26:45.59:327,46,0	0/1:12,7:20:2.27:119,0,2	0/1:10,21:29:14.81:216,0,15	1/1:2,10:14:24.73:165,25,0	0/1:14,2:15:13.92:14,0,175	0/0:20,1:23:22.19:0,22,385	0/1:11,1:12:25.80:26,0,87	1/1:2,14:17:37.80:268,38,0	1/1:6,16:22:43.70:306,44,0	1/1:4,10:15:22.91:159,23,0	0/1:4,4:9:11:78,0,11
chr10	48691554	.	G	GA	433.02	PASS	AB=1.000;AC=4;AF=0.071;AN=56;BaseQRankSum=-1.408;DP=581;FS=3.543;HRun=13;HaplotypeScore=77.5864;InbreedingCoeff=0.4670;MQ=63.78;MQ0=15;MQRankSum=-0.737;QD=4.61;ReadPosRankSum=-4.419;VQSLOD=0.9282;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:71.60:0,72,573	0/0:5,0:5:11.98:0,12,97	0/1:31,0:10:8.02:8,0,29	0/1:35,0:11:24.94:25,0,31	0/0:30,0:29:74.68:0,75,592	0/0:19,0:19:50.84:0,51,404	0/0:15,0:14:35.93:0,36,291	1/1:23,5:28:36.51:512,37,0	0/0:12,0:12:29.96:0,30,246	0/0:16,0:16:35.78:0,36,294	0/0:24,0:24:54.29:0,54,427	0/0:16,0:16:37.65:0,38,272	0/0:12,0:12:26.62:0,27,198	0/0:11,0:11:26.92:0,27,214	0/0:22,0:22:50.91:0,51,418	0/0:15,0:15:29.93:0,30,243	0/0:36,0:36:68.89:0,69,700	0/0:23,1:24:41.28:0,41,430	0/0:21,0:19:22.75:0,23,384	0/0:33,0:31:62.15:0,62,484	0/0:16,0:16:38.93:0,39,318	0/0:13,0:12:32.63:0,33,248	0/0:23,0:22:53.74:0,54,438	0/0:9,0:9:14.96:0,15,123	0/0:19,0:19:50.80:0,51,405	0/0:27,0:27:50.40:0,50,396	0/0:22,0:21:47.10:0,47,371	0/0:11,0:11:25.66:0,26,219
chr10	48692685	.	T	TTA	8402.98	PASS	AB=0.563;AC=25;AF=0.446;AN=56;BaseQRankSum=-1.069;DP=488;FS=3.550;HRun=0;HaplotypeScore=72.1389;InbreedingCoeff=0.8715;MQ=56.91;MQ0=6;MQRankSum=0.642;QD=30.56;ReadPosRankSum=1.046;VQSLOD=6.2201;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:69.14:0,69,1053	0/0:9,0:9:27.09:0,27,427	0/0:7,0:6:8.67:0,9,189	0/0:6,0:4:8.98:0,9,113	1/1:0,24:23:54.09:983,54,0	0/0:21,0:21:60:0,60,814	0/0:10,0:10:27.04:0,27,397	0/0:26,0:22:66.21:0,66,1009	0/0:15,0:15:39.08:0,39,546	1/1:0,24:24:69.19:1341,69,0	1/1:0,15:17:41.61:672,42,0	0/0:9,0:9:23.99:0,24,354	0/0:17,0:17:47.68:0,48,656	1/1:0,12:13:27.09:542,27,0	0/0:17,0:17:48.15:0,48,736	0/0:25,0:25:74.27:0,74,1120	1/1:2,19:20:26.88:743,27,0	1/1:3,22:25:21.96:936,22,0	0/1:6,0:25:81.89:118,0,82	1/1:2,0:16:7.07:10,7,0	1/1:0,0:12:6.92:17,7,0	0/0:5,0:5:15.05:0,15,238	0/0:10,0:10:26.94:0,27,367	0/0:9,0:9:27.09:0,27,426	1/1:0,28:29:60.21:1213,60,0	1/1:2,24:27:65.99:1220,66,0	1/1:2,0:26:6.54:10,7,0	1/1:0,11:11:30.10:599,30,0
chr10	48693111	.	AAGTCACG	A	3436.10	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=10.582;DP=652;FS=3.497;HRun=0;HaplotypeScore=129.1511;InbreedingCoeff=0.9652;MQ=55.50;MQ0=37;MQRankSum=-8.864;QD=36.95;ReadPosRankSum=-0.056;VQSLOD=3.4954;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,129,4288	0/0:6,0:6:18.06:0,18,692	0/0:25,0:6:18.06:0,18,615	0/0:20,0:4:12.04:0,12,311	0/0:21,0:21:57.17:0,57,1995	0/0:17,0:17:45.15:0,45,1582	0/0:29,0:29:84.27:0,84,3032	0/0:45,0:21:60.11:0,60,1881	0/0:14,0:14:24.05:0,24,826	0/0:27,0:27:72.20:0,72,2516	0/0:20,0:19:51.18:0,51,1881	0/0:19,0:16:45.15:0,45,1722	0/0:16,0:16:48.16:0,48,1844	0/0:14,0:14:33.11:0,33,1296	0/0:36,0:36:87.25:0,87,3033	0/0:27,0:27:50.77:0,51,1716	0/0:44,0:44:99:0,114,4023	0/0:17,0:17:51.06:0,51,1618	1/1:9,10:9:27.08:609,27,0	1/1:1,23:24:33.04:752,33,0	1/1:1,17:17:8.99:178,9,0	0/0:29,0:28:75.25:0,75,2769	0/0:23,0:23:60.16:0,60,2010	0/0:15,0:14:39.12:0,39,1258	0/0:17,0:17:48.13:0,48,1511	0/0:20,0:19:54.19:0,54,1991	1/1:0,32:31:72.25:1897,72,0	0/0:5,0:5:15.05:0,15,570
chr10	48693264	.	C	CTG	1550.43	PASS	AB=0.525;AC=9;AF=0.173;AN=52;BaseQRankSum=-5.330;DP=666;FS=0.660;HRun=0;HaplotypeScore=86.6161;InbreedingCoeff=0.8925;MQ=50.39;MQ0=36;MQRankSum=3.343;QD=16.32;ReadPosRankSum=-1.176;VQSLOD=3.4470;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:59,0:59:63.19:0,63,782	0/0:11,0:11:12.04:0,12,151	./.	./.	0/0:27,0:25:42.13:0,42,530	0/0:23,0:23:24.08:0,24,303	0/0:20,0:19:39.12:0,39,492	0/0:40,0:27:66.20:0,66,821	0/0:26,0:26:41.94:0,42,490	0/0:35,0:31:78.24:0,78,973	0/0:20,0:17:26.75:0,27,315	0/1:2,19:13:1.74:512,0,2	1/1:3,18:12:21.07:349,21,0	0/0:16,0:16:33.09:0,33,403	0/0:24,0:24:33.09:0,33,403	0/0:23,0:23:18.06:0,18,227	0/0:29,0:29:42.13:0,42,530	0/0:31,0:31:59.75:0,60,753	0/0:23,0:20:51.16:0,51,644	0/0:19,0:17:39.12:0,39,492	0/0:41,0:41:75.22:0,75,932	1/1:4,17:12:17.96:299,18,0	1/1:1,14:6:12.04:199,12,0	1/1:3,13:11:21.07:349,21,0	0/0:16,0:18:26.75:0,27,293	0/0:21,0:19:48.15:0,48,606	0/0:25,0:23:48.15:0,48,602	0/0:6,0:4:12.04:0,12,151
chr10	48693949	.	ATAAT	A	1580.25	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=11.568;DP=464;FS=0.516;HRun=0;HaplotypeScore=87.8048;InbreedingCoeff=0.9738;MQ=61.82;MQ0=0;MQRankSum=-8.767;QD=20.26;ReadPosRankSum=-6.540;VQSLOD=1.7476;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:63.21:0,63,1600	0/0:13,0:13:39.13:0,39,945	0/0:7,0:5:15.05:0,15,260	0/0:10,0:10:24.08:0,24,401	0/0:25,0:25:71.93:0,72,1604	0/0:15,0:15:42.14:0,42,1036	0/0:9,0:9:27.09:0,27,625	0/0:36,0:36:99:0,102,2249	0/0:12,0:12:36.09:0,36,792	0/0:24,0:24:69.22:0,69,1716	0/0:11,0:11:33.10:0,33,773	0/0:14,0:14:42.14:0,42,1019	0/0:7,0:7:18.06:0,18,458	0/0:10,0:10:30.10:0,30,693	0/0:20,0:20:60.20:0,60,1383	0/0:17,0:17:51.16:0,51,1251	0/0:30,0:30:90.28:0,90,2298	0/0:11,0:11:30.10:0,30,789	1/1:9,1:13:21.21:241,21,0	1/1:16,7:26:55.59:515,56,0	1/1:7,3:12:21.72:215,22,0	0/0:3,0:3:9:0,9,188	0/0:9,0:9:27.08:0,27,525	0/0:17,0:17:51.17:0,51,1271	0/0:24,0:24:69.23:0,69,1751	0/0:22,0:22:63.18:0,63,1416	1/1:16,5:25:71.03:768,71,0	0/0:18,0:17:48.14:0,48,1264
chr10	48696018	.	C	CGGG	1608.54	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-3.639;DP=475;FS=0.757;HRun=4;HaplotypeScore=91.8968;InbreedingCoeff=0.8665;MQ=50.14;MQ0=46;MQRankSum=-3.872;QD=31.54;ReadPosRankSum=0.580;VQSLOD=0.9055;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:16:36.55:0,37,524	0/0:9,0:7:18.06:0,18,276	0/0:66,0:11:16.58:0,17,129	0/0:75,0:12:3.26:0,3,31	0/0:25,0:24:33.55:0,34,485	0/0:9,0:6:15.05:0,15,229	0/0:14,0:15:36.02:0,36,486	0/0:17,0:14:30.10:0,30,458	0/0:4,0:4:3.01:0,3,46	0/0:19,0:19:51.14:0,51,754	0/0:12,0:12:21.02:0,21,321	0/0:9,0:10:27.04:0,27,378	0/0:8,0:7:15.05:0,15,230	0/0:11,0:9:12.02:0,12,161	0/0:8,0:8:18.06:0,18,275	0/0:9,0:9:23.99:0,24,315	0/0:15,0:13:27.06:0,27,390	0/0:12,0:10:30.06:0,30,416	1/1:3,9:9:27.09:601,27,0	1/1:1,11:12:15.05:315,15,0	1/1:8,4:12:15.02:260,15,0	0/0:9,0:9:18.06:0,18,276	0/0:18,0:17:39.13:0,39,589	0/0:8,0:6:11.82:0,12,183	0/0:14,0:14:24.07:0,24,368	0/0:12,0:12:27.09:0,27,413	1/1:4,11:15:27.09:588,27,0	0/0:15,0:14:24.07:0,24,367
chr10	48696290	.	A	AAC	3675.60	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-11.578;DP=562;FS=7.513;HRun=0;HaplotypeScore=77.0082;InbreedingCoeff=0.9974;MQ=65.34;MQ0=1;MQRankSum=2.346;QD=40.39;ReadPosRankSum=3.449;VQSLOD=5.1985;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,108,1370	0/0:8,0:8:21.06:0,21,284	0/0:19,0:13:29.22:0,29,253	0/0:16,0:14:25.20:0,25,202	0/0:23,0:22:47.86:0,48,598	0/0:15,0:15:42.12:0,42,574	0/0:13,0:13:39.12:0,39,548	0/0:39,0:38:96.76:0,97,1059	0/0:17,0:17:43.88:0,44,511	0/0:34,0:34:99:0,101,1093	0/0:27,0:27:78.14:0,78,1014	0/0:13,0:13:39.10:0,39,506	0/0:16,0:16:44.78:0,45,538	0/0:22,0:22:61.80:0,62,739	0/0:21,0:21:62.94:0,63,716	0/0:15,0:15:44.76:0,45,538	0/0:23,0:23:63.03:0,63,742	0/0:16,0:16:48.13:0,48,658	1/1:2,26:27:79.06:1181,79,0	1/1:0,20:20:50.97:740,51,0	1/1:2,24:26:63.17:1024,63,0	0/0:11,0:11:30.09:0,30,401	0/0:22,0:22:63.11:0,63,828	0/0:15,0:15:45.09:0,45,539	0/0:8,0:8:24.07:0,24,331	0/0:28,0:28:75.52:0,76,878	1/1:0,17:17:44.89:730,45,0	0/0:11,0:11:33.09:0,33,443
chr10	48696297	.	CA	C	483.77	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=1.556;DP=563;FS=14.260;HRun=13;HaplotypeScore=74.2596;InbreedingCoeff=0.8304;MQ=63.97;MQ0=1;MQRankSum=2.448;QD=13.07;ReadPosRankSum=-2.493;VQSLOD=1.6598;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:96.25:0,96,1212	0/0:7,0:7:21.04:0,21,259	0/0:18,0:15:7.18:0,7,248	0/0:14,0:12:6.30:0,6,246	0/0:25,0:24:57.15:0,57,710	0/0:14,0:14:36.12:0,36,471	0/0:14,0:14:39.13:0,39,510	1/1:12,25:36:17.28:574,17,0	0/0:15,0:15:36.10:0,36,456	0/0:35,0:35:96.30:0,96,1229	0/0:29,0:29:72.23:0,72,922	0/0:13,0:13:33.05:0,33,390	0/0:17,0:17:42.08:0,42,500	0/0:24,0:24:62.85:0,63,770	0/0:19,0:19:51.13:0,51,621	0/0:16,0:16:45.15:0,45,585	0/0:21,0:21:54.17:0,54,689	0/0:16,0:16:48.13:0,48,605	0/0:25,0:24:66.17:0,66,835	0/0:19,0:19:48.14:0,48,608	0/0:26,0:26:69.22:0,69,903	0/0:13,0:13:36.11:0,36,457	0/0:23,0:23:57.64:0,58,720	0/0:15,0:15:38.55:0,39,438	0/0:9,0:9:27.09:0,27,355	0/0:30,0:30:69.22:0,69,890	0/0:17,0:17:45.15:0,45,589	0/0:11,0:11:33.09:0,33,401
chr10	48696470	.	CACCATAA	C	818.40	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.906;DP=644;FS=21.665;HRun=0;HaplotypeScore=141.2872;InbreedingCoeff=0.9987;MQ=79.88;MQ0=0;MQRankSum=-4.565;QD=37.20;ReadPosRankSum=-2.933;VQSLOD=1.4154;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:87.30:0,87,3275	0/0:11,0:11:30.09:0,30,1094	0/0:15,0:15:45.12:0,45,1428	0/0:24,0:24:60.14:0,60,2069	0/0:25,0:25:72.25:0,72,2750	0/0:31,0:31:87.30:0,87,3293	0/0:24,0:24:69.24:0,69,2736	1/1:5,17:20:45.09:913,45,0	0/0:17,0:17:48.15:0,48,1766	0/0:31,0:31:90.30:0,90,3321	0/0:29,0:29:78.17:0,78,2854	0/0:29,0:29:84.19:0,84,3016	0/0:13,0:13:39.11:0,39,1436	0/0:28,0:28:81.28:0,81,3177	0/0:27,0:27:78.27:0,78,2957	0/0:24,0:24:63.22:0,63,2476	0/0:34,0:34:99:0,99,3706	0/0:25,0:25:72.25:0,72,2835	0/0:26,0:26:63.22:0,63,2419	0/0:20,0:20:51.11:0,51,1920	0/0:33,0:33:93.32:0,93,3574	0/0:12,0:12:36.12:0,36,1420	0/0:21,0:21:60.18:0,60,2182	0/0:15,0:15:45.13:0,45,1662	0/0:21,0:20:54.19:0,54,2049	0/0:25,0:25:75.26:0,75,2854	0/0:22,0:22:60.21:0,60,2326	0/0:10,0:10:30.09:0,30,1095
chr10	48696708	.	T	TA	1056.02	PASS	AB=0.552;AC=7;AF=0.125;AN=56;BaseQRankSum=-1.426;DP=492;FS=2.674;HRun=11;HaplotypeScore=59.1702;InbreedingCoeff=0.7552;MQ=77.34;MQ0=3;MQRankSum=-0.008;QD=16.76;ReadPosRankSum=0.852;VQSLOD=4.6883;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:77.75:0,78,640	0/0:9,0:11:24.98:0,25,174	0/0:33,0:22:7.69:0,8,157	0/0:25,0:15:14.32:0,14,88	0/0:31,0:31:71.60:0,72,551	0/0:24,0:24:68.72:0,69,532	0/0:13,0:13:35.83:0,36,274	0/0:21,0:22:49.81:0,50,373	0/0:6,0:6:5.94:0,6,46	0/0:23,1:24:29.30:0,29,410	0/0:22,0:24:42.73:0,43,410	0/0:8,0:8:17.91:0,18,137	0/0:17,0:17:37.88:0,38,282	0/0:9,0:9:23.88:0,24,181	0/0:11,0:11:29.89:0,30,232	0/0:9,0:9:20.91:0,21,163	0/0:26,0:26:67.78:0,68,516	0/0:14,0:14:29.86:0,30,232	1/1:4,9:13:6.81:245,7,0	1/1:5,17:23:53.81:498,54,0	1/1:3,8:11:21.04:213,21,0	0/0:11,0:11:20.85:0,21,154	0/0:10,0:11:22.95:0,23,168	0/0:13,0:13:35.86:0,36,279	0/0:18,1:19:11.34:0,11,268	0/0:20,0:20:50.79:0,51,394	0/1:3,13:16:9.33:241,0,9	0/0:14,0:15:37.86:0,38,280
chr10	48696814	.	GA	G	1433.52	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=8.203;DP=519;FS=3.657;HRun=10;HaplotypeScore=54.4137;InbreedingCoeff=0.9713;MQ=67.43;MQ0=6;MQRankSum=1.038;QD=17.48;ReadPosRankSum=0.385;VQSLOD=4.1164;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,2:36:47.04:0,47,933	0/0:4,0:4:12.03:0,12,133	0/0:27,0:13:29.54:0,30,253	0/0:28,0:15:14.33:0,14,180	0/0:21,1:21:19.07:0,19,439	0/0:18,0:18:48.13:0,48,530	0/0:17,0:16:45.12:0,45,498	0/0:21,0:21:57.15:0,57,627	0/0:8,0:8:18.03:0,18,190	0/0:17,1:16:22.06:0,22,463	0/0:23,1:24:40.54:0,41,655	0/0:9,0:9:24.06:0,24,265	0/0:16,0:15:35.57:0,36,365	0/0:12,0:12:30.06:0,30,322	0/0:14,0:14:37.34:0,37,401	0/0:14,0:14:33.09:0,33,365	0/0:28,0:28:69.19:0,69,763	0/0:22,0:22:62.99:0,63,653	1/1:2,14:15:40.86:344,41,0	1/1:4,20:24:53.97:469,54,0	1/1:1,13:14:35.99:312,36,0	0/0:8,0:8:24.06:0,24,266	0/0:23,0:22:63.16:0,63,688	0/0:13,0:13:36.01:0,36,382	0/0:23,0:23:37.45:0,37,638	0/0:24,1:25:28.09:0,28,538	1/1:7,20:27:53.98:469,54,0	0/0:6,0:6:12.03:0,12,132
chr10	48697932	.	AAC	A	453.15	PASS	AB=0.832;AC=9;AF=0.167;AN=54;BaseQRankSum=5.058;DP=351;FS=0.000;HRun=0;HaplotypeScore=92.1838;InbreedingCoeff=0.2771;MQ=33.09;MQ0=12;MQRankSum=-2.343;QD=5.96;ReadPosRankSum=0.228;VQSLOD=2.4395;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:16.96:0,17,361	0/0:4,0:4:11.93:0,12,118	1/1:9,1:1:1.25:3,1,0	./.	0/0:21,0:20:50.05:0,50,439	0/0:14,0:13:25.12:0,25,227	0/0:10,0:10:18.87:0,19,182	0/1:22,0:22:15.67:16,0,247	0/0:7,0:7:17.05:0,17,146	0/0:22,0:20:36.90:0,37,528	0/0:15,0:15:41.88:0,42,484	0/0:10,0:10:22.97:0,23,249	0/0:11,0:11:18.64:0,19,216	0/0:11,0:11:20.40:0,20,287	0/0:14,0:13:26.35:0,26,281	0/0:7,0:7:17.99:0,18,226	0/0:10,0:9:5.62:0,6,176	0/0:10,0:10:26.43:0,26,254	0/1:9,2:10:30.83:76,0,31	0/1:6,6:12:1.37:234,0,1	1/1:2,2:4:5.97:55,6,0	0/0:17,0:17:49.31:0,49,512	0/0:15,0:14:23.44:0,23,270	0/0:13,0:12:25.25:0,25,232	0/0:20,0:19:39.94:0,40,470	0/0:18,0:15:33.32:0,33,331	0/1:5,6:11:17.61:190,0,18	0/1:6,0:5:5.20:5,0,92
chr10	48697939	.	C	CT	542.54	PASS	AB=0.833;AC=19;AF=0.352;AN=54;BaseQRankSum=8.635;DP=277;FS=26.574;HRun=0;HaplotypeScore=72.4233;InbreedingCoeff=-0.4225;MQ=31.72;MQ0=8;MQRankSum=-1.061;QD=2.61;ReadPosRankSum=0.120;VQSLOD=0.6846;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:36.08:0,36,413	0/0:4,0:4:9.03:0,9,110	1/1:9,0:1:1.25:3,1,0	./.	0/1:11,3:15:44.80:45,0,271	0/1:11,2:12:47.74:48,0,269	0/1:6,1:7:12.02:12,0,176	0/1:7,6:13:23.67:24,0,227	0/1:4,2:6:74.61:75,0,93	0/1:17,2:18:9.96:10,0,536	0/0:13,1:14:13.49:0,13,430	0/0:8,1:9:21.06:0,21,259	0/1:7,2:10:14.96:15,0,163	0/1:8,2:10:36.60:37,0,260	0/1:9,1:9:5.34:5,0,268	0/1:6,1:7:28.57:29,0,167	0/0:8,0:8:18.06:0,18,221	0/0:6,1:7:13.73:0,14,191	0/0:4,0:3:9.01:0,9,95	0/1:7,1:8:4.16:4,0,164	0/0:2,0:2:5.88:0,6,50	0/1:13,4:17:91.18:91,0,413	0/1:10,4:14:99:144,0,223	0/1:7,1:8:14.17:14,0,155	0/1:13,4:16:99:114,0,391	0/1:15,3:15:9.52:10,0,345	0/1:6,1:7:12.22:12,0,181	0/0:5,0:5:12.04:0,12,150
chr10	48698029	.	A	AG	94.04	PASS	AB=0.917;AC=4;AF=0.071;AN=56;BaseQRankSum=-2.009;DP=286;FS=0.000;HRun=0;HaplotypeScore=36.7598;InbreedingCoeff=0.1217;MQ=54.07;MQ0=13;MQRankSum=3.802;QD=2.54;ReadPosRankSum=1.280;VQSLOD=1.9327;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:21.99:0,22,132	0/0:3,0:3:5.92:0,6,43	0/0:28,0:6:11.91:0,12,88	0/0:15,0:6:1.72:0,2,32	0/0:7,0:6:13.74:0,14,82	0/0:10,0:9:17.73:0,18,122	0/0:8,0:8:12.64:0,13,76	0/0:14,0:14:38.53:0,39,292	0/0:8,0:8:16.87:0,17,94	0/0:12,0:12:26.45:0,26,183	0/0:16,0:16:42.06:0,42,319	0/0:9,0:8:14.61:0,15,89	0/0:12,0:12:25.59:0,26,146	0/0:10,0:10:20.06:0,20,136	0/0:9,0:9:19.01:0,19,120	0/0:5,0:5:7.84:0,8,40	0/0:8,0:8:11.77:0,12,65	0/0:3,0:2:3:0,3,25	0/1:4,4:7:12.85:83,0,13	0/1:12,0:10:51.96:69,0,52	0/1:7,0:7:0.97:19,0,1	0/0:7,0:7:12.59:0,13,65	0/0:7,0:7:10.04:0,10,52	0/0:9,0:8:9.74:0,10,51	0/0:13,0:13:23.89:0,24,134	0/0:16,0:16:40.06:0,40,273	0/1:10,0:10:5.68:31,0,6	0/0:9,0:8:15.62:0,16,99
chr10	48698035	.	AAG	A	594	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=2.433;DP=268;FS=2.274;HRun=0;HaplotypeScore=34.6216;InbreedingCoeff=0.8091;MQ=68.86;MQ0=6;MQRankSum=0.248;QD=16.50;ReadPosRankSum=-0.498;VQSLOD=3.0278;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:24.08:0,24,413	0/0:3,0:3:6.02:0,6,112	0/0:24,0:8:24.08:0,24,368	0/0:17,0:9:21.28:0,21,282	0/0:4,0:4:9.01:0,9,102	0/0:9,0:8:12.04:0,12,196	0/0:5,0:5:12.04:0,12,220	0/0:15,0:15:42.14:0,42,747	0/0:8,0:8:15.05:0,15,252	0/0:14,0:14:24.08:0,24,420	0/0:18,0:18:39.11:0,39,676	1/1:8,1:8:11.97:152,12,0	1/1:7,3:10:15.03:219,15,0	0/0:11,0:11:30.05:0,30,461	0/0:8,0:8:15.05:0,15,240	0/0:7,0:7:9.03:0,9,168	0/0:8,0:8:12.04:0,12,197	0/0:5,0:4:12:0,12,170	0/0:11,0:10:24.06:0,24,405	0/0:11,0:10:21.04:0,21,316	0/0:5,0:5:6.02:0,6,92	1/1:4,2:6:12.03:160,12,0	1/1:0,5:5:8.81:132,9,0	1/1:4,2:5:6.02:88,6,0	0/0:6,0:6:6.02:0,6,98	0/0:16,0:16:33.11:0,33,544	0/0:10,0:10:15.05:0,15,274	0/0:7,0:7:21.07:0,21,362
chr10	48699554	.	TA	T	724.11	PASS	AB=0.916;AC=5;AF=0.089;AN=56;BaseQRankSum=3.747;DP=410;FS=28.541;HRun=10;HaplotypeScore=66.1185;InbreedingCoeff=0.2925;MQ=54.65;MQ0=33;MQRankSum=-1.444;QD=9.65;ReadPosRankSum=-2.680;VQSLOD=-0.0395;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:31:93.25:0,93,1028	0/0:3,0:3:9.02:0,9,100	0/0:8,0:6:10.98:0,11,147	0/0:6,0:3:5.69:0,6,44	0/0:19,0:17:30.07:0,30,325	0/0:22,0:24:34.45:0,34,573	0/0:7,0:5:15.04:0,15,166	1/1:9,32:34:95.84:815,96,0	0/0:10,0:9:21.06:0,21,232	0/0:11,0:11:30.07:0,30,318	0/1:9,1:6:8:8,0,148	0/0:8,0:8:23.80:0,24,244	0/0:18,0:18:48.12:0,48,523	0/1:8,1:9:5:5,0,178	0/0:11,1:11:1.02:0,1,239	0/0:15,0:15:39.11:0,39,431	0/0:24,0:22:60.16:0,60,664	0/1:14,1:10:1.97:2,0,208	0/0:30,1:30:62.06:0,62,897	0/0:11,0:9:27.04:0,27,281	0/0:7,0:5:15.02:0,15,156	0/0:2,0:2:6.02:0,6,66	0/0:4,0:4:12.03:0,12,133	0/0:4,0:3:9.02:0,9,100	0/0:16,0:14:42.11:0,42,457	0/0:15,0:13:39.05:0,39,417	0/0:22,0:22:54.10:0,54,569	0/0:25,0:24:63.15:0,63,687
chr10	48702390	.	CTG	C	3902.67	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=13.966;DP=655;FS=0.868;HRun=0;HaplotypeScore=92.6807;InbreedingCoeff=0.9995;MQ=73.86;MQ0=1;MQRankSum=-0.928;QD=37.53;ReadPosRankSum=4.280;VQSLOD=5.8808;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,129,2266	0/0:12,0:12:30.10:0,30,550	0/0:25,0:22:60.20:0,60,1037	0/0:32,0:30:90.31:0,90,1541	0/0:17,0:17:51.17:0,51,926	0/0:24,0:24:69.24:0,69,1231	0/0:23,0:23:69.24:0,69,1234	0/0:38,0:38:99:0,102,1771	0/0:26,0:26:75.23:0,75,1305	0/0:24,0:24:66.22:0,66,1176	0/0:15,0:15:45.15:0,45,785	1/1:0,21:21:60.20:860,60,0	1/1:1,26:27:78.20:1110,78,0	0/0:18,0:18:54.19:0,54,989	0/0:23,0:23:69.24:0,69,1256	0/0:17,0:17:51.17:0,51,935	0/0:13,0:13:39.13:0,39,706	0/0:28,0:28:78.20:0,78,1331	0/0:23,0:23:54.18:0,54,955	0/0:17,0:17:51.17:0,51,915	0/0:44,0:44:99:0,126,2296	1/1:2,13:15:30.08:430,30,0	1/1:0,10:10:27.09:387,27,0	1/1:0,31:31:78.26:1117,78,0	0/0:20,0:20:57.20:0,57,1044	0/0:24,0:24:63.20:0,63,1074	0/0:31,0:31:93.29:0,93,1662	0/0:13,0:13:36.12:0,36,660
chr10	48703099	.	ACTT	A	1253.77	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.680;DP=761;FS=4.515;HRun=0;HaplotypeScore=102.8444;InbreedingCoeff=0.9957;MQ=74.58;MQ0=0;MQRankSum=-1.040;QD=39.18;ReadPosRankSum=-4.150;VQSLOD=3.2158;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,148,3086	0/0:12,0:12:33.11:0,33,721	0/0:14,0:14:39.12:0,39,765	0/0:27,0:25:51.47:0,51,944	0/0:25,0:25:63.22:0,63,1343	0/0:20,0:20:57.20:0,57,1212	0/0:31,0:31:81.26:0,81,1714	1/1:0,32:31:90.27:1349,90,0	0/0:31,0:31:87.30:0,87,1885	0/0:34,0:34:99:0,99,2136	0/0:26,0:26:72.25:0,72,1574	0/0:30,0:30:84.29:0,84,1793	0/0:18,0:18:51.17:0,51,1041	0/0:23,0:23:60.19:0,60,1270	0/0:40,0:40:99:0,114,2375	0/0:27,0:27:72.25:0,72,1558	0/0:23,0:23:66.23:0,66,1424	0/0:31,0:31:84.29:0,84,1814	0/0:27,0:27:66.23:0,66,1386	0/0:35,0:35:96.33:0,96,2062	0/0:25,0:25:69.24:0,69,1462	0/0:27,0:27:75.24:0,75,1564	0/0:21,0:21:60.21:0,60,1281	0/0:33,0:33:99:0,99,2068	0/0:26,0:26:72.25:0,72,1548	0/0:28,0:28:69.24:0,69,1498	0/0:34,0:34:99:0,102,2206	0/0:7,0:7:21.07:0,21,437
chr10	48703807	.	CA	C	1466.29	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=3.691;DP=465;FS=18.994;HRun=7;HaplotypeScore=56.0996;InbreedingCoeff=0.9861;MQ=70.97;MQ0=0;MQRankSum=1.183;QD=21.88;ReadPosRankSum=0.634;VQSLOD=2.0297;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:90.27:0,90,1116	0/0:6,0:6:15.05:0,15,189	0/0:13,0:12:31.23:0,31,322	0/0:10,0:10:14.98:0,15,172	0/0:25,0:25:72.23:0,72,905	0/0:22,0:22:66.20:0,66,818	0/0:18,0:18:54.10:0,54,635	0/0:37,0:37:90.19:0,90,1083	0/0:12,0:12:30.10:0,30,377	0/0:18,0:18:42.13:0,42,528	0/0:19,0:19:54.17:0,54,667	0/0:16,0:16:42.12:0,42,515	0/0:15,0:15:39.12:0,39,490	0/0:10,0:10:24.08:0,24,302	0/0:13,0:13:33.11:0,33,414	0/0:13,0:13:39.11:0,39,477	0/0:27,0:27:72.23:0,72,904	0/0:23,0:23:66.01:0,66,773	1/1:2,16:18:47.32:466,47,0	1/1:2,12:14:30.07:305,30,0	1/1:2,15:17:45.10:458,45,0	0/0:13,0:13:36.12:0,36,452	0/0:10,0:10:21.07:0,21,263	0/0:18,0:18:51.13:0,51,614	0/0:14,0:14:39.12:0,39,490	0/0:9,0:9:24.08:0,24,302	1/1:2,16:18:39.09:398,39,0	0/0:6,0:6:18.06:0,18,222
chr10	48705713	.	GC	G	6098.49	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=13.512;DP=676;FS=2.821;HRun=4;HaplotypeScore=66.3372;InbreedingCoeff=0.9944;MQ=85.08;MQ0=0;MQRankSum=-1.554;QD=32.44;ReadPosRankSum=3.957;VQSLOD=5.4931;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:56:99:0,157,2158	0/0:7,0:7:21.07:0,21,294	0/0:20,0:20:57.17:0,57,768	0/0:22,0:22:46.93:0,47,612	1/1:0,16:16:45.14:539,45,0	0/0:18,0:18:45.08:0,45,595	0/0:31,0:31:87.28:0,87,1198	0/0:25,0:25:63.20:0,63,867	0/0:24,0:24:69.16:0,69,940	1/1:2,21:23:63.17:740,63,0	1/1:1,14:15:39.12:466,39,0	0/0:27,0:27:75.22:0,75,1014	0/0:16,0:16:48.12:0,48,616	1/1:1,22:23:63.19:755,63,0	0/0:39,0:39:99:0,102,1388	0/0:30,0:30:84.28:0,84,1176	1/1:1,35:36:99:1224,102,0	1/1:0,21:21:63.19:756,63,0	0/0:16,0:16:45.15:0,45,629	0/0:11,0:11:30.10:0,30,418	0/0:63,0:63:99:0,177,2332	0/0:11,0:11:30.09:0,30,402	0/0:16,0:16:44.18:0,44,581	0/0:31,0:31:90.30:0,90,1258	1/1:0,25:24:54.17:648,54,0	1/1:1,24:25:69.21:828,69,0	0/0:25,0:25:75.24:0,75,1031	1/1:0,4:4:12.04:144,12,0
chr10	48705945	.	A	AAAAAAAC	2093.95	PASS	AB=1.000;AC=20;AF=0.357;AN=56;BaseQRankSum=2.532;DP=477;FS=21.428;HRun=0;HaplotypeScore=147.7103;InbreedingCoeff=0.0804;MQ=44.29;MQ0=21;MQRankSum=-3.168;QD=7.61;ReadPosRankSum=2.026;VQSLOD=1.0846;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:50.44:0,50,637	0/0:5,0:5:12.03:0,12,198	0/1:25,0:2:13.21:13,0,18	0/1:23,0:6:4.39:22,0,4	0/1:30,0:27:93.10:93,0,157	0/0:30,0:29:70.20:0,70,915	0/0:7,0:7:17.64:0,18,236	0/0:36,0:35:75.95:0,76,681	0/0:14,0:14:39.05:0,39,456	0/1:15,0:14:52.28:99,0,52	0/1:19,0:17:32.58:34,0,33	0/0:5,0:5:8.53:0,9,45	0/0:7,0:6:4.90:0,5,37	0/1:11,0:9:6.74:7,0,47	0/0:14,0:14:26.79:0,27,408	0/0:17,0:17:41.56:0,42,511	0/1:14,0:14:3.13:3,0,64	0/1:23,0:22:27.77:28,0,170	1/1:13,2:16:43.44:668,43,0	1/1:9,1:13:22.30:560,22,0	1/1:8,1:7:8.84:174,9,0	0/1:7,0:6:11.08:11,0,32	0/1:11,0:11:13.09:13,0,82	0/1:7,0:7:8.58:9,0,47	0/1:27,0:25:60.22:60,0,175	0/0:23,0:22:31.33:0,31,285	1/1:10,9:23:5.41:473,5,0	0/0:23,0:22:36.88:0,37,346
chr10	48705955	.	C	CA	1842.05	PASS	AB=0.956;AC=39;AF=0.696;AN=56;BaseQRankSum=4.266;DP=491;FS=2.947;HRun=17;HaplotypeScore=80.2767;InbreedingCoeff=0.4173;MQ=48.75;MQ0=20;MQRankSum=-4.173;QD=5.16;ReadPosRankSum=1.771;VQSLOD=2.4808;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:2.40:0,2,167	0/0:5,0:5:7.92:0,8,47	0/1:28,0:4:0.59:15,0,1	0/0:25,0:8:2.51:0,3,47	1/1:29,3:29:14.19:191,14,0	0/0:29,0:28:25.58:0,26,267	0/1:8,1:9:7.40:7,0,67	0/0:33,0:37:20.01:0,20,70	0/0:15,0:15:3.87:0,4,40	1/1:7,12:18:27.46:204,27,0	1/1:18,2:18:13.05:83,13,0	1/1:5,0:5:0.47:1,0,0	1/1:8,0:7:5.62:22,6,0	1/1:11,0:10:17.76:97,18,0	0/1:16,0:16:17.62:18,0,83	1/1:13,2:15:29.06:205,29,0	0/1:14,1:15:2.01:93,0,2	1/1:21,1:21:20.45:132,20,0	1/1:14,2:20:30.93:229,31,0	1/1:15,2:16:1.05:85,1,0	1/1:3,8:9:5.22:33,5,0	1/1:8,0:7:6.08:26,6,0	1/1:10,0:10:10.98:49,11,0	1/1:7,0:7:5.30:25,5,0	1/1:19,4:21:17.55:141,18,0	1/1:15,11:25:10.60:198,11,0	1/1:17,2:18:17.64:133,18,0	0/1:14,1:15:16.76:21,0,17
chr10	48710450	.	C	CT	1581.44	PASS	AB=0.545;AC=9;AF=0.161;AN=56;BaseQRankSum=-7.726;DP=606;FS=9.315;HRun=11;HaplotypeScore=67.4894;InbreedingCoeff=0.8223;MQ=69.49;MQ0=1;MQRankSum=0.047;QD=17.00;ReadPosRankSum=0.169;VQSLOD=4.1723;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,2:46:36.21:0,36,758	0/0:10,0:11:25.93:0,26,192	0/0:16,0:10:15.50:0,16,99	0/0:16,0:13:8.67:0,9,54	0/0:34,2:36:53.15:0,53,593	0/0:22,0:24:38.51:0,39,383	0/0:21,0:22:46.83:0,47,354	0/0:25,1:26:13.91:0,14,289	0/0:25,0:25:47.25:0,47,370	0/0:23,0:23:44.76:0,45,347	0/0:24,0:24:31.24:0,31,367	1/1:3,16:20:32.23:360,32,0	0/1:2,10:12:15.95:208,0,16	0/0:14,0:14:29.84:0,30,232	0/0:20,0:22:51.86:0,52,379	0/0:22,0:23:58.77:0,59,443	0/0:27,0:27:59.70:0,60,462	0/0:16,1:20:15.46:0,15,281	0/0:9,0:19:21.77:0,22,77	0/0:5,0:24:37.46:0,37,123	0/0:2,0:13:22.39:0,22,65	1/1:3,18:21:48.71:502,49,0	1/1:6,14:21:21.75:367,22,0	1/1:1,17:19:8.99:306,9,0	0/0:20,0:23:53.88:0,54,387	0/0:20,0:21:40.86:0,41,307	0/0:3,0:18:22.38:0,22,65	0/0:17,0:17:14.82:0,15,112
chr10	48711271	.	AACC	A	311.72	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=3.613;DP=385;FS=12.126;HRun=0;HaplotypeScore=62.7133;InbreedingCoeff=0.7460;MQ=73.32;MQ0=5;MQRankSum=-3.354;QD=12.99;ReadPosRankSum=-1.847;VQSLOD=1.7224;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:66.23:0,66,1378	0/0:10,0:10:21.07:0,21,395	0/0:33,0:18:2.46:0,2,460	0/0:36,0:15:8.22:0,8,335	0/0:11,0:11:24.04:0,24,417	0/0:13,0:13:27.09:0,27,554	0/0:15,0:15:36.11:0,36,710	0/0:21,0:20:36.59:0,37,703	0/0:12,0:12:18.06:0,18,351	0/0:12,0:12:23.41:0,23,485	0/0:9,0:9:18.06:0,18,371	0/0:12,0:12:30.09:0,30,595	0/0:9,0:9:12.03:0,12,215	0/0:11,0:11:18.06:0,18,332	0/0:10,0:10:24.08:0,24,494	0/0:12,0:12:24.03:0,24,443	0/0:29,0:29:58.51:0,59,1121	0/0:10,0:10:18.06:0,18,355	1/1:6,6:12:18.02:251,18,0	1/1:2,4:6:5.90:92,6,0	0/0:4,0:4:0:0,0,0	0/0:8,0:8:18.06:0,18,334	0/0:9,0:9:15.05:0,15,270	0/0:15,0:15:36.08:0,36,706	0/0:15,0:15:37.01:0,37,725	0/0:14,0:14:26.91:0,27,528	1/1:1,5:5:6.02:92,6,0	0/0:6,0:6:6.02:0,6,124
chr10	48711602	.	T	TA	1019.72	PASS	AB=0.813;AC=10;AF=0.179;AN=56;BaseQRankSum=-4.739;DP=358;FS=22.221;HRun=10;HaplotypeScore=41.5306;InbreedingCoeff=0.6513;MQ=62.99;MQ0=0;MQRankSum=-4.733;QD=15.22;ReadPosRankSum=-2.319;VQSLOD=1.5901;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:35.95:0,36,295	0/0:9,0:9:20.70:0,21,157	0/0:11,0:7:14.96:0,15,120	0/0:8,0:7:5.06:0,5,18	0/0:15,0:15:30.84:0,31,246	0/0:25,0:25:59.87:0,60,486	0/0:10,0:10:17.96:0,18,148	1/1:13,16:29:48.09:501,48,0	0/0:14,0:14:38.93:0,39,317	0/0:14,0:14:30.82:0,31,262	0/1:7,0:7:9.17:9,0,84	0/0:12,0:12:35.96:0,36,295	0/0:12,0:11:29.95:0,30,246	0/0:11,0:11:29.95:0,30,246	0/0:21,0:21:59.93:0,60,492	0/0:13,0:13:26.94:0,27,220	0/0:25,0:26:61.91:0,62,491	0/0:13,0:13:32.93:0,33,266	0/1:2,3:5:12.58:78,0,13	1/1:3,3:6:14.94:134,15,0	1/1:0,1:1:3.01:32,3,0	0/0:3,0:3:2.99:0,3,25	0/0:4,0:5:10.07:0,10,61	0/0:12,0:12:29.95:0,30,246	0/0:17,0:17:41.90:0,42,341	0/0:13,0:13:35.94:0,36,293	1/1:4,15:19:20.49:422,20,0	0/0:12,0:12:32.93:0,33,266
chr10	48712537	.	C	CT	2418.18	PASS	AB=0.955;AC=11;AF=0.196;AN=56;BaseQRankSum=-11.263;DP=502;FS=4.090;HRun=9;HaplotypeScore=51.6299;InbreedingCoeff=0.8654;MQ=72.96;MQ0=3;MQRankSum=0.108;QD=19.50;ReadPosRankSum=-1.845;VQSLOD=3.4268;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:80.93:0,81,703	0/0:4,0:4:12:0,12,104	0/1:20,1:14:27.76:28,0,108	0/0:17,0:13:15.83:0,16,130	0/0:16,0:16:38.99:0,39,339	0/0:19,0:19:50.99:0,51,443	0/0:15,0:15:35.99:0,36,313	1/1:10,25:35:75.12:789,75,0	0/0:7,0:7:18:0,18,156	0/0:34,1:35:77.93:0,78,677	0/0:24,0:24:59.98:0,60,521	0/0:13,0:13:29.97:0,30,256	0/0:12,0:12:35.95:0,36,305	0/0:12,0:12:32.99:0,33,286	0/0:7,0:7:21:0,21,182	0/0:12,0:12:32.98:0,33,287	0/0:31,0:31:68.91:0,69,592	0/0:19,0:19:33.78:0,34,371	1/1:3,14:17:41.95:446,42,0	1/1:1,16:17:25.08:505,25,0	1/1:1,13:14:36.10:398,36,0	0/0:7,0:7:14.99:0,15,130	0/0:21,0:21:56.97:0,57,491	0/0:17,1:18:11.80:0,12,331	0/0:19,0:19:44.97:0,45,390	0/0:14,0:14:38.97:0,39,336	1/1:2,17:19:39.11:431,39,0	0/0:18,0:18:50.96:0,51,439
chr10	48715868	.	C	CT	2784	PASS	AB=0.779;AC=38;AF=0.679;AN=56;BaseQRankSum=-0.781;DP=446;FS=1.790;HRun=14;HaplotypeScore=58.0672;InbreedingCoeff=0.2381;MQ=73.32;MQ0=2;MQRankSum=-1.918;QD=7.23;ReadPosRankSum=-2.541;VQSLOD=1.8520;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:24:25.30:0,25,159	0/0:4,0:4:2.87:0,3,19	0/1:20,0:14:5.83:6,0,53	0/1:13,0:9:17.88:37,0,18	0/1:4,9:14:5.04:112,0,5	0/0:17,0:17:29.43:0,29,192	0/1:12,1:14:3.73:4,0,98	1/1:12,9:21:12.73:213,13,0	0/0:16,0:16:25.53:0,26,159	1/1:8,5:14:11.82:87,12,0	1/1:16,7:23:14.85:226,15,0	1/1:7,2:9:15.44:122,15,0	0/1:3,8:11:4.26:90,0,4	1/1:1,12:14:26.94:227,27,0	0/1:12,2:14:23.33:23,0,124	0/1:5,1:6:14.98:15,0,45	0/1:10,17:28:0.96:353,0,1	1/1:4,16:20:10.73:218,11,0	1/1:7,9:17:10.35:176,10,0	1/1:6,2:25:29.90:260,30,0	1/1:6,0:18:17.04:85,17,0	1/1:4,3:7:7.24:56,7,0	0/1:7,9:16:6.79:68,0,7	1/1:1,7:8:3:26,3,0	0/1:7,6:13:0.04:83,0,0	1/1:7,12:20:7.37:155,7,0	1/1:9,1:23:17.62:98,18,0	1/1:4,11:16:26.71:213,27,0
chr10	48716061	.	GT	G	485.12	PASS	AB=0.980;AC=7;AF=0.125;AN=56;BaseQRankSum=4.117;DP=399;FS=15.102;HRun=9;HaplotypeScore=68.5931;InbreedingCoeff=0.4425;MQ=71.83;MQ0=6;MQRankSum=0.834;QD=6.65;ReadPosRankSum=-4.543;VQSLOD=-0.6619;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:35.43:0,35,357	0/0:1,0:1:3.01:0,3,35	0/0:34,0:12:20.73:0,21,181	0/0:34,0:14:24.05:0,24,190	0/0:16,0:16:36.07:0,36,388	0/0:22,0:22:59.57:0,60,610	0/0:10,0:10:21.05:0,21,232	1/1:2,19:21:56.62:498,57,0	0/0:11,0:11:27.07:0,27,301	0/0:10,0:10:24.04:0,24,248	0/0:14,0:14:38.88:0,39,408	0/0:10,0:10:23.09:0,23,238	0/0:7,0:7:14.07:0,14,174	0/0:8,0:8:23.95:0,24,241	0/0:14,0:14:39.05:0,39,409	0/0:11,1:12:5.32:0,5,264	0/0:15,0:15:39.04:0,39,405	0/0:11,0:11:33.10:0,33,380	0/1:15,1:16:14.05:39,0,14	1/1:8,1:9:4.61:50,5,0	0/1:6,0:5:3.36:3,0,8	0/0:9,0:9:18.01:0,18,191	0/0:9,0:9:23.55:0,24,242	0/0:5,0:5:15.04:0,15,172	0/0:12,0:12:30.09:0,30,346	0/0:24,0:24:54.09:0,54,584	0/1:21,0:21:22.71:23,0,53	0/0:25,0:25:54.01:0,54,525
chr10	48716108	.	AAGACCC	A	807.88	PASS	AB=0.975;AC=15;AF=0.268;AN=56;BaseQRankSum=9.483;DP=366;FS=41.168;HRun=0;HaplotypeScore=105.9124;InbreedingCoeff=-0.3693;MQ=40.38;MQ0=10;MQRankSum=-7.738;QD=4.06;ReadPosRankSum=4.763;VQSLOD=0.0918;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:31.34:0,31,523	0/0:3,0:3:6.02:0,6,87	0/0:26,0:6:13.21:0,13,134	0/1:33,0:7:38.82:62,0,39	0/1:20,0:20:38.77:39,0,381	0/0:16,0:16:32.53:0,33,629	0/0:6,0:6:13.82:0,14,211	0/0:18,0:18:32.54:0,33,467	0/0:7,0:7:21.07:0,21,357	0/1:4,0:4:63.98:64,0,74	0/0:8,0:8:20.97:0,21,241	0/1:11,0:11:73.63:74,0,106	0/1:12,0:12:99:124,0,197	0/1:4,3:7:58.18:58,0,84	0/0:17,0:17:47.78:0,48,662	0/0:19,0:18:47.11:0,47,753	0/0:17,0:17:6.50:0,7,324	0/0:8,0:8:20.99:0,21,254	0/1:17,0:17:99:103,0,198	0/1:12,0:11:17.28:17,0,135	0/1:6,0:5:1.51:2,0,47	0/1:7,0:7:65.70:66,0,93	0/1:8,0:8:16.53:17,0,129	0/1:7,0:7:37.65:38,0,54	0/1:11,0:11:83.06:83,0,163	0/1:21,1:21:84.66:85,0,478	0/1:21,0:21:99:131,0,240	0/0:9,0:9:11.51:0,12,213
chr10	48716592	.	T	TA	3819.90	PASS	AB=0.713;AC=33;AF=0.589;AN=56;BaseQRankSum=-4.649;DP=535;FS=5.142;HRun=14;HaplotypeScore=61.6368;InbreedingCoeff=0.4510;MQ=73.81;MQ0=2;MQRankSum=0.803;QD=10.70;ReadPosRankSum=-1.575;VQSLOD=2.7722;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,2:24:50.13:0,50,327	0/0:7,0:7:17.73:0,18,115	0/1:20,0:13:10.17:10,0,22	0/0:15,0:12:9.06:0,9,51	1/1:7,11:18:12.08:185,12,0	0/0:28,0:32:65.16:0,65,402	0/0:20,0:24:41.43:0,41,247	0/0:29,0:30:37.36:0,37,236	0/0:20,1:21:17.89:0,18,241	1/1:7,16:24:50.77:421,51,0	1/1:0,12:13:32.75:263,33,0	1/1:2,3:6:8.84:67,9,0	1/1:2,13:16:22.49:294,22,0	1/1:5,10:15:1.73:139,2,0	0/1:17,2:21:19.11:19,0,132	0/0:22,1:25:28.78:0,29,305	1/1:7,19:29:45.40:360,45,0	1/1:4,9:13:12.88:107,13,0	0/1:9,13:24:9.76:249,0,10	0/1:7,15:23:1.53:192,0,2	0/1:7,9:18:11.80:134,0,12	1/1:5,6:12:4.52:146,5,0	1/1:3,7:10:1.73:139,2,0	1/1:5,12:19:26.68:213,27,0	1/1:6,11:17:25.71:215,26,0	1/1:5,17:22:28.69:362,29,0	0/1:9,11:22:16.13:224,0,16	0/1:6,9:15:4.37:81,0,4
chr10	48717061	.	T	TACTGGC	1918.81	PASS	AC=8;AF=0.148;AN=54;BaseQRankSum=4.989;DP=511;FS=1.737;HRun=0;HaplotypeScore=147.2554;InbreedingCoeff=0.9242;MQ=59.10;MQ0=12;MQRankSum=-4.071;QD=73.80;ReadPosRankSum=4.913;VQSLOD=4.5859;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,110,2259	0/0:4,0:4:11.87:0,12,240	0/0:26,0:9:16.26:0,16,297	0/0:25,0:10:13.64:0,14,201	0/0:32,0:31:72.08:0,72,1482	0/0:22,0:21:60.12:0,60,1350	0/0:12,0:12:23.79:0,24,521	./.	0/0:21,0:21:51.09:0,51,1101	0/0:21,0:20:44.35:0,44,978	0/0:25,0:25:48.86:0,49,828	0/0:21,0:20:49.19:0,49,1059	0/0:13,0:13:29.85:0,30,511	0/0:17,0:16:38.89:0,39,792	0/0:28,0:27:64.11:0,64,1164	0/0:21,0:20:48.14:0,48,1027	0/0:20,0:20:40.27:0,40,780	0/0:15,0:15:29.95:0,30,624	1/1:1,1:1:3.01:94,3,0	1/1:2,6:9:27.08:755,27,0	1/1:1,5:5:15.05:442,15,0	0/0:10,0:10:27.09:0,27,565	0/0:19,0:18:42.79:0,43,692	0/0:20,0:18:36.51:0,37,842	0/0:18,0:18:42.84:0,43,764	0/0:33,0:32:69.01:0,69,1401	1/1:2,5:9:27.09:776,27,0	0/0:16,0:15:27.09:0,27,666
chr10	48717073	.	T	TCC	409.11	PASS	AB=1.000;AC=9;AF=0.167;AN=54;BaseQRankSum=7.453;DP=495;FS=5.835;HRun=0;HaplotypeScore=76.5845;InbreedingCoeff=0.7715;MQ=49.17;MQ0=17;MQRankSum=-5.178;QD=10.49;ReadPosRankSum=4.559;VQSLOD=2.5833;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,130,1749	0/0:4,0:4:12.04:0,12,164	0/1:16,0:3:2.81:3,0,51	0/0:21,0:6:10.91:0,11,99	0/0:30,0:28:81.20:0,81,1029	0/0:22,0:21:63.18:0,63,814	0/0:11,0:11:23.75:0,24,294	./.	0/0:20,0:20:48.13:0,48,638	0/0:20,0:19:54.18:0,54,758	0/0:25,0:25:63.18:0,63,815	0/0:20,0:19:51.13:0,51,665	0/0:12,0:12:30.08:0,30,376	0/0:21,0:20:48.16:0,48,648	0/0:29,0:28:75.24:0,75,1004	0/0:25,0:23:57.61:0,58,757	0/0:23,0:22:28.93:0,29,533	0/0:15,0:15:36.09:0,36,476	1/1:1,1:1:2.97:20,3,0	1/1:2,6:7:21.04:224,21,0	1/1:1,5:5:1.73:99,2,0	0/0:7,0:7:18:0,18,212	0/0:16,0:15:36.12:0,36,484	0/0:20,0:18:40.02:0,40,556	0/0:18,0:18:48.13:0,48,639	0/0:30,0:29:87.27:0,87,1156	1/1:2,5:7:20.74:202,21,0	0/0:18,0:16:30.10:0,30,408
chr10	48717713	.	T	TCA	5054.04	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-13.139;DP=673;FS=4.283;HRun=0;HaplotypeScore=78.1686;InbreedingCoeff=0.9997;MQ=86.31;MQ0=1;MQRankSum=-2.528;QD=49.55;ReadPosRankSum=2.087;VQSLOD=5.4450;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:96.30:0,96,1325	0/0:14,0:14:36.12:0,36,504	0/0:21,0:21:44.34:0,44,548	0/0:25,0:25:47.57:0,48,833	0/0:30,0:30:81.27:0,81,1134	0/0:30,0:30:87.26:0,87,1182	0/0:20,0:20:54.18:0,54,754	0/0:31,0:31:87.29:0,87,1217	0/0:25,0:25:69.23:0,69,963	0/0:26,0:26:72.23:0,72,990	0/0:24,0:24:72.24:0,72,1008	0/0:16,0:16:45.13:0,45,612	0/0:17,0:17:45.15:0,45,629	0/0:23,0:23:66.22:0,66,923	0/0:33,0:33:90.30:0,90,1259	0/0:24,0:24:72.10:0,72,965	0/0:44,0:44:99:0,126,1742	0/0:19,0:19:51.14:0,51,692	1/1:3,14:17:45.15:786,45,0	1/1:0,17:17:48.16:865,48,0	1/1:0,42:41:99:2053,114,0	0/0:28,0:28:84.28:0,84,1176	0/0:17,0:17:51.16:0,51,697	0/0:16,0:16:48.16:0,48,672	0/0:21,0:21:60.20:0,60,836	0/0:24,0:24:69.23:0,69,966	1/1:1,25:26:75.26:1350,75,0	0/0:9,0:9:27.09:0,27,375
chr10	48719920	.	C	CATT	2005.70	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-1.366;DP=671;FS=2.238;HRun=0;HaplotypeScore=100.1744;InbreedingCoeff=0.9997;MQ=76.40;MQ0=0;MQRankSum=-6.132;QD=51.43;ReadPosRankSum=-3.582;VQSLOD=4.6401;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,108,1720	0/0:12,0:12:36.12:0,36,614	0/0:18,0:18:48.16:0,48,759	0/0:20,0:20:47.83:0,48,635	0/0:35,0:35:96.31:0,96,1609	0/0:21,0:21:57.19:0,57,968	0/0:20,0:20:60.19:0,60,987	1/1:12,26:39:99:2101,102,0	0/0:19,0:19:57.19:0,57,951	0/0:30,0:30:87.30:0,87,1484	0/0:17,0:17:45.15:0,45,765	0/0:15,0:15:42.13:0,42,673	0/0:22,0:22:63.20:0,63,1047	0/0:15,0:15:45.15:0,45,767	0/0:33,0:33:90.28:0,90,1478	0/0:26,0:26:75.23:0,75,1226	0/0:22,0:22:63.22:0,63,1066	0/0:22,0:22:63.21:0,63,1045	0/0:19,0:19:54.18:0,54,920	0/0:28,0:28:72.25:0,72,1222	0/0:29,0:29:84.26:0,84,1361	0/0:21,0:21:57.20:0,57,972	0/0:24,0:24:63.20:0,63,1030	0/0:24,0:24:66.23:0,66,1120	0/0:24,0:24:69.24:0,69,1173	0/0:31,0:31:84.27:0,84,1378	0/0:32,0:32:93.27:0,93,1491	0/0:15,0:15:36.04:0,36,527
chr10	48720256	.	ACTAT	A	6855.70	PASS	AB=1.000;AC=39;AF=0.750;AN=52;BaseQRankSum=11.517;DP=723;FS=0.491;HRun=0;HaplotypeScore=211.6277;InbreedingCoeff=0.8234;MQ=68.84;MQ0=1;MQRankSum=-6.408;QD=13.58;ReadPosRankSum=0.937;VQSLOD=3.9703;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:39.13:0,39,893	0/0:18,0:18:33.11:0,33,740	./.	0/0:20,0:16:3:0,3,29	1/1:23,0:26:8.80:72,9,0	1/1:11,16:27:27.18:458,27,0	1/1:8,3:11:12.35:220,12,0	0/0:45,0:44:9.02:0,9,112	0/0:26,0:26:39.13:0,39,887	1/1:25,0:27:40.15:310,40,0	1/1:28,0:30:31.53:179,32,0	1/1:13,6:19:21.07:324,21,0	1/1:15,7:22:33.11:509,33,0	1/1:15,0:17:35.01:208,35,0	0/0:36,0:36:78.24:0,78,1622	1/1:20,19:39:54.18:833,54,0	1/1:18,0:18:12.01:112,12,0	0/1:15,0:14:28.03:109,0,28	1/1:24,0:24:17.57:128,18,0	1/1:35,0:35:52.06:332,52,0	./.	1/1:19,7:26:51.32:813,51,0	1/1:21,10:31:36.07:484,36,0	1/1:13,11:24:30.08:455,30,0	1/1:34,0:36:53.49:342,53,0	1/1:31,0:35:52.93:439,53,0	1/1:21,0:21:36.25:302,36,0	1/1:17,0:22:34.93:228,35,0
chr10	48720289	.	CT	C	4177.89	PASS	AB=0.656;AC=13;AF=0.232;AN=56;BaseQRankSum=9.936;DP=677;FS=12.416;HRun=1;HaplotypeScore=215.4562;InbreedingCoeff=-0.0929;MQ=52.60;MQ0=0;MQRankSum=-10.440;QD=15.36;ReadPosRankSum=2.905;VQSLOD=2.0445;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:81.27:0,81,1244	0/0:17,0:17:51.16:0,51,776	0/0:15,0:8:17.66:0,18,248	0/0:12,0:6:12.01:0,12,153	0/0:26,0:26:50.19:0,50,599	0/0:25,0:25:42.64:0,43,432	0/0:15,0:15:32.90:0,33,381	0/0:44,0:43:99:0,126,1925	0/0:25,0:25:75.25:0,75,1163	0/1:12,8:25:99:366,0,321	0/1:9,9:25:32.50:377,0,32	0/0:14,0:14:26.51:0,27,195	0/0:21,0:21:32.21:0,32,270	0/1:6,6:17:10.81:401,0,11	0/0:42,0:42:99:0,126,1960	0/0:30,0:29:61.10:0,61,557	0/1:7,1:15:28.52:29,0,160	0/1:7,7:14:99:202,0,104	0/1:3,4:10:99:190,0,102	0/1:16,12:38:99:614,0,131	0/1:12,3:15:22.93:23,0,61	0/0:32,0:32:55.20:0,55,308	0/0:28,0:28:44.86:0,45,395	0/0:28,0:28:31.97:0,32,324	1/1:6,14:32:31.05:642,31,0	0/1:20,11:38:99:473,0,542	0/1:9,9:24:87.73:469,0,88	0/1:10,7:18:89.33:393,0,89
chr10	48720297	.	CT	C	3636.05	PASS	AB=0.833;AC=15;AF=0.268;AN=56;BaseQRankSum=10.333;DP=690;FS=22.360;HRun=1;HaplotypeScore=221.9376;InbreedingCoeff=-0.1673;MQ=53.93;MQ0=0;MQRankSum=-11.032;QD=10.73;ReadPosRankSum=1.131;VQSLOD=-0.1168;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:84.24:0,84,1243	0/0:17,0:17:51.15:0,51,765	0/1:16,0:8:6.54:7,0,160	0/0:17,0:11:24.08:0,24,346	0/1:21,9:30:99:152,0,352	0/0:25,1:26:0.70:0,1,346	0/0:15,0:15:32.88:0,33,360	0/0:39,0:38:99:0,111,1598	0/0:22,0:22:66.22:0,66,1023	0/1:18,6:24:99:295,0,317	0/1:20,7:27:73.92:337,0,74	0/0:16,0:16:26.51:0,27,190	0/0:22,0:22:32.17:0,32,238	0/1:12,5:17:1.97:395,0,2	0/0:46,0:46:99:0,135,2090	0/0:30,0:29:61.07:0,61,513	0/1:14,1:15:42.44:42,0,58	0/1:9,6:14:96.06:157,0,96	0/1:12,3:15:99:147,0,280	0/1:27,9:36:99:516,0,170	0/0:13,1:14:18.96:0,19,110	0/1:30,1:31:28.49:28,0,173	0/0:26,0:26:38.80:0,39,289	0/0:28,1:29:21.72:0,22,210	1/1:24,9:33:6.65:538,7,0	0/1:33,6:39:99:327,0,601	0/1:18,5:23:99:344,0,126	0/1:12,6:18:99:349,0,112
chr10	48720298	.	T	TATC	1644.37	PASS	AB=0.978;AC=18;AF=0.321;AN=56;BaseQRankSum=6.573;DP=686;FS=6.041;HRun=0;HaplotypeScore=251.1895;InbreedingCoeff=-0.3624;MQ=53.91;MQ0=0;MQRankSum=-7.528;QD=4.25;ReadPosRankSum=-7.501;VQSLOD=0.2522;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:84.24:0,84,1290	0/0:16,0:16:48.16:0,48,773	0/1:17,0:8:14.77:15,0,93	0/0:18,0:13:24.55:0,25,360	0/0:32,0:32:38.87:0,39,280	0/1:27,0:27:99:111,0,443	0/1:14,0:14:98.84:99,0,272	0/0:37,0:36:92.52:0,93,1090	0/0:22,0:22:66.22:0,66,1058	0/1:24,0:24:27.82:28,0,175	0/1:27,0:27:18.85:81,0,19	0/1:16,0:16:85.05:122,0,85	0/1:19,3:22:99:133,0,156	1/1:16,0:16:0.74:90,1,0	0/0:46,0:46:99:0,135,2105	0/0:29,0:28:32.98:0,33,740	0/0:15,0:15:14.64:0,15,78	0/1:15,0:14:35.60:36,0,78	0/1:16,0:16:4.19:4,0,120	0/1:36,0:36:42.87:100,0,43	0/0:15,0:15:5.37:0,5,27	0/1:25,6:31:62.51:397,0,63	0/1:26,0:26:87.20:216,0,87	0/1:27,2:29:99:189,0,109	0/1:32,0:32:31.96:86,0,32	0/0:37,0:37:17.88:0,18,386	0/1:21,0:21:18.39:18,0,85	0/1:18,0:18:76.74:77,0,80
chr10	48720303	.	ATC	A	1022.92	PASS	AB=0.893;AC=12;AF=0.214;AN=56;BaseQRankSum=13.528;DP=680;FS=10.982;HRun=0;HaplotypeScore=232.2619;InbreedingCoeff=-0.2666;MQ=54.98;MQ0=0;MQRankSum=-13.321;QD=3.98;ReadPosRankSum=1.064;VQSLOD=1.6267;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:90.31:0,90,1619	0/0:16,0:16:48.16:0,48,912	0/0:18,0:10:26.57:0,27,393	0/0:18,0:14:36.12:0,36,542	0/0:32,0:32:62.29:0,62,699	0/0:27,0:27:45.17:0,45,533	0/0:14,0:14:23.12:0,23,347	0/0:39,0:38:99:0,108,1678	0/0:25,0:25:75.24:0,75,1349	0/1:19,2:21:94.32:94,0,536	0/1:20,5:25:48.03:48,0,190	0/0:17,0:17:20.14:0,20,219	0/0:22,0:22:27.18:0,27,238	0/1:12,2:14:52.65:77,0,53	0/0:46,0:46:99:0,132,2395	0/0:33,0:32:64.56:0,65,696	0/1:14,0:14:35.34:35,0,125	0/1:9,5:13:99:133,0,163	0/1:17,1:18:44.92:45,0,620	0/1:28,5:33:99:158,0,360	0/1:16,0:16:4.98:5,0,95	0/0:31,0:31:47.41:0,47,282	0/0:23,0:23:20.29:0,20,200	0/0:28,0:28:28.60:0,29,314	0/1:24,3:27:93.43:146,0,93	0/1:35,3:38:99:138,0,1019	0/1:19,2:21:99:128,0,332	0/1:12,4:16:99:165,0,180
chr10	48720310	.	ATC	A	2176.67	PASS	AB=0.841;AC=16;AF=0.286;AN=56;BaseQRankSum=12.265;DP=700;FS=0.000;HRun=0;HaplotypeScore=232.8697;InbreedingCoeff=-0.3677;MQ=55.22;MQ0=1;MQRankSum=-11.768;QD=5.44;ReadPosRankSum=-2.279;VQSLOD=2.3933;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:96.33:0,96,1905	0/0:17,0:17:51.16:0,51,987	0/0:21,0:12:29.99:0,30,455	0/0:19,0:15:42.14:0,42,806	0/1:24,8:32:99:103,0,416	0/0:24,0:24:66.11:0,66,1156	0/0:11,0:11:30.05:0,30,515	0/1:34,0:33:1.09:1,0,1306	0/0:25,0:25:75.24:0,75,1481	0/1:19,5:24:99:202,0,215	0/1:18,7:25:90.42:99,0,90	0/0:16,1:17:17.01:0,17,307	0/1:21,3:24:9.17:9,0,469	0/1:9,5:14:31.64:133,0,32	0/0:45,0:45:99:0,132,2643	0/0:36,0:35:99:0,105,2006	0/1:10,7:17:72.21:128,0,72	0/1:12,1:12:49.30:72,0,49	0/1:16,3:19:98.71:99,0,477	0/1:25,10:35:99:287,0,236	0/1:18,0:18:2.98:3,0,49	0/1:33,5:38:99:135,0,420	0/0:22,0:22:27.66:0,28,369	0/0:26,1:27:22.47:0,22,346	0/1:18,12:30:16.83:374,0,17	0/1:31,7:38:99:265,0,483	0/1:15,7:22:99:328,0,113	0/1:16,1:17:93.73:94,0,100
chr10	48720317	.	A	AATCT	16249.25	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-1.053;DP=727;FS=2.546;HRun=0;HaplotypeScore=197.8810;InbreedingCoeff=0.9644;MQ=58.02;MQ0=2;MQRankSum=-4.167;QD=33.16;ReadPosRankSum=-3.649;VQSLOD=4.3560;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:90.13:0,90,1312	0/0:14,0:14:33.11:0,33,545	0/0:21,0:13:10.43:0,10,185	0/0:22,0:18:31.99:0,32,375	1/1:14,21:37:72.24:1277,72,0	0/0:23,0:23:45.15:0,45,753	0/0:10,0:10:21.07:0,21,351	1/1:17,24:42:75.19:1541,75,0	0/0:25,0:25:63.18:0,63,967	1/1:8,14:23:63.16:1376,63,0	1/1:12,13:25:5.85:673,6,0	1/1:8,11:19:24.05:490,24,0	1/1:10,16:28:24.08:554,24,0	1/1:7,7:14:18.06:309,18,0	0/0:47,0:47:99:0,126,2058	0/0:37,0:36:87.29:0,87,1416	1/1:10,10:20:17.72:372,18,0	1/1:3,10:13:12.04:296,12,0	1/1:8,10:20:48.13:956,48,0	1/1:11,22:34:69.23:1256,69,0	1/1:2,18:21:27.09:539,27,0	1/1:11,30:41:75.08:1406,75,0	1/1:12,14:26:17.88:413,18,0	1/1:12,14:25:20.74:503,21,0	1/1:14,15:29:42.14:841,42,0	1/1:13,22:35:87.25:1986,87,0	1/1:7,15:22:50.86:1085,51,0	1/1:8,6:14:18.06:378,18,0
chr10	48721844	.	G	GCAGGAA	1435.02	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-4.261;DP=587;FS=16.039;HRun=0;HaplotypeScore=119.5755;InbreedingCoeff=0.8499;MQ=78.72;MQ0=0;MQRankSum=-5.002;QD=71.75;ReadPosRankSum=-4.416;VQSLOD=2.0435;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,111,2701	0/0:9,0:9:27.09:0,27,665	0/0:18,0:18:48.15:0,48,1013	0/0:25,0:24:66.22:0,66,1407	0/0:13,0:13:36.12:0,36,864	0/0:25,0:25:72.25:0,72,1759	0/0:23,0:23:69.24:0,69,1674	1/1:8,11:20:51.17:1530,51,0	0/0:22,0:22:63.22:0,63,1551	0/0:17,0:17:51.17:0,51,1210	0/0:21,0:21:63.20:0,63,1478	0/0:21,0:21:63.22:0,63,1500	0/0:17,0:17:42.14:0,42,1020	0/0:26,0:26:69.24:0,69,1665	0/0:24,0:24:69.24:0,69,1622	0/0:25,0:25:66.70:0,67,1626	0/0:31,0:31:93.30:0,93,2169	0/0:26,0:25:72.25:0,72,1761	0/0:18,0:18:54.19:0,54,1298	0/0:17,0:17:51.18:0,51,1234	0/0:35,0:35:99:0,105,2496	0/0:16,0:16:45.15:0,45,1108	0/0:12,0:12:36.12:0,36,878	0/0:13,0:13:39.09:0,39,900	0/0:16,0:16:48.14:0,48,1106	0/0:23,0:23:69.24:0,69,1695	0/0:35,0:35:99:0,99,2308	0/0:1,0:1:3.01:0,3,74
chr10	48722457	.	AAAGAGAAGAG	A	3021.38	PASS	AB=0.734;AC=16;AF=0.308;AN=52;BaseQRankSum=0.885;DP=577;FS=2.142;HRun=0;HaplotypeScore=159.9784;InbreedingCoeff=0.7224;MQ=48.82;MQ0=28;MQRankSum=-1.458;QD=20.01;ReadPosRankSum=-1.435;VQSLOD=3.0126;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:26:27.08:0,27,991	0/0:7,0:7:18.06:0,18,741	./.	./.	1/1:11,9:19:15.05:324,15,0	0/0:7,0:11:18.06:0,18,644	0/0:8,0:10:9.39:0,9,198	0/0:44,0:44:10.55:0,11,75	0/0:15,0:15:19.31:0,19,497	1/1:9,11:20:33.09:639,33,0	1/1:10,0:11:9.03:126,9,0	0/0:16,0:19:7.14:0,7,690	0/0:7,0:11:12.76:0,13,315	1/1:3,16:19:24.08:705,24,0	0/0:28,0:28:42.14:0,42,1981	0/0:23,0:23:42.14:0,42,1704	0/1:14,10:24:4.17:252,0,4	1/1:7,4:11:3.01:88,3,0	0/0:5,0:5:6.01:0,6,64	0/0:18,0:23:32.92:0,33,684	0/0:8,0:8:9.41:0,9,130	0/0:13,0:16:28.04:0,28,928	0/0:13,0:21:21.89:0,22,346	0/0:15,0:15:7.31:0,7,45	1/1:6,10:16:9.03:264,9,0	0/1:11,5:15:9.90:293,0,10	0/0:12,0:18:42.13:0,42,757	1/1:9,5:12:18.06:510,18,0
chr10	48722462	.	G	GAAGA	1178.01	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=4.191;DP=567;FS=10.917;HRun=0;HaplotypeScore=121.9239;InbreedingCoeff=0.0768;MQ=49.44;MQ0=27;MQRankSum=-0.847;QD=8.99;ReadPosRankSum=0.799;VQSLOD=2.4444;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,24:28:32.85:720,33,0	0/0:7,0:7:21.07:0,21,382	0/0:33,0:8:9.03:0,9,138	0/0:51,0:11:14.04:0,14,198	0/0:19,0:18:20.17:0,20,439	0/1:13,0:12:13.37:13,0,263	0/1:8,0:8:3.76:4,0,263	0/0:60,0:53:95.77:0,96,969	0/1:19,0:17:99:108,0,448	0/0:19,0:19:41.21:0,41,486	0/0:10,0:10:25.62:0,26,317	0/0:21,0:19:45.95:0,46,616	0/0:12,0:12:11.90:0,12,318	0/0:18,0:18:30.07:0,30,337	0/0:27,0:27:75.26:0,75,1287	0/0:22,0:22:56.72:0,57,1003	0/0:24,0:24:18.73:0,19,639	0/0:9,0:9:18.06:0,18,271	0/1:6,0:6:42.23:42,0,97	0/1:26,0:26:99:173,0,366	0/1:11,0:9:55.27:55,0,85	0/0:16,0:16:39.95:0,40,608	0/0:22,0:22:57.35:0,57,766	0/0:19,0:17:24.85:0,25,248	0/0:16,0:16:24.07:0,24,328	0/0:15,0:14:35.46:0,35,482	0/1:18,0:18:99:205,0,147	0/0:14,0:12:33.86:0,34,436
chr10	48722466	.	AG	A	603.70	PASS	AB=0.963;AC=8;AF=0.143;AN=56;BaseQRankSum=7.131;DP=559;FS=1.943;HRun=1;HaplotypeScore=97.9864;InbreedingCoeff=-0.1732;MQ=49.92;MQ0=35;MQRankSum=-3.073;QD=4.34;ReadPosRankSum=-1.514;VQSLOD=-0.0910;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:29,1:28:80.97:81,0,222	0/0:7,0:7:21.07:0,21,335	0/0:28,0:6:9.03:0,9,139	0/0:47,1:11:12.77:0,13,200	0/1:18,0:17:99:124,0,386	0/0:14,0:13:27.09:0,27,413	0/0:8,0:8:24.08:0,24,373	0/0:58,0:49:99:0,125,1370	0/0:19,0:17:51.16:0,51,738	0/1:19,0:19:99:251,0,364	0/1:6,4:11:98.51:99,0,259	0/0:20,0:18:54.16:0,54,796	0/0:13,0:13:36.12:0,36,566	0/1:18,0:18:46.73:47,0,52	0/0:27,0:27:75.73:0,76,1198	0/0:22,0:22:62.96:0,63,1006	0/0:23,0:23:30.45:0,30,562	0/0:9,0:9:13.24:0,13,235	0/0:6,0:6:15.05:0,15,203	0/0:29,0:28:66.18:0,66,909	0/0:11,0:10:17.93:0,18,228	0/0:18,0:18:51.16:0,51,754	0/0:22,0:22:60.19:0,60,936	0/0:19,0:17:36.45:0,36,464	0/1:15,0:15:29.20:29,0,214	0/1:14,0:13:52.92:53,0,354	0/0:19,0:19:45.13:0,45,583	0/1:14,0:12:56.54:57,0,254
chr10	48723809	.	GT	G	11127.70	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=10.259;DP=545;FS=0.000;HRun=3;HaplotypeScore=70.8907;InbreedingCoeff=0.9808;MQ=66.17;MQ0=0;MQRankSum=1.188;QD=31.08;ReadPosRankSum=1.189;VQSLOD=4.7315;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,126,1710	0/0:5,0:5:14.96:0,15,189	0/0:10,0:9:24.08:0,24,331	0/0:16,0:13:36.09:0,36,476	1/1:0,20:19:48.08:575,48,0	0/0:16,0:16:42.14:0,42,604	0/0:21,0:21:63.16:0,63,864	1/1:2,13:15:36.10:432,36,0	0/0:19,0:19:57.19:0,57,818	1/1:0,16:16:45.93:523,46,0	1/1:0,22:22:63.20:778,63,0	1/1:0,18:18:45.07:537,45,0	1/1:1,21:22:57.18:703,57,0	1/1:0,16:16:36.05:424,36,0	0/0:23,0:23:66.15:0,66,924	0/0:33,0:33:99:0,99,1402	1/1:1,16:17:45.14:556,45,0	1/1:0,19:18:51.16:631,51,0	1/1:1,18:19:54.12:640,54,0	1/1:3,23:26:47.14:708,47,0	1/1:1,17:18:48.15:593,48,0	1/1:0,19:19:38.95:442,39,0	1/1:0,17:17:38.91:458,39,0	1/1:1,26:27:75.02:870,75,0	1/1:0,16:16:45.06:537,45,0	1/1:0,25:25:72.23:891,72,0	1/1:0,23:22:63.13:757,63,0	1/1:0,3:3:6.02:74,6,0
chr10	48724132	.	A	AT	1887.79	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-7.938;DP=539;FS=4.654;HRun=8;HaplotypeScore=52.1321;InbreedingCoeff=0.9732;MQ=78.80;MQ0=1;MQRankSum=0.349;QD=23.60;ReadPosRankSum=0.019;VQSLOD=4.2344;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:66.03:0,66,604	0/0:5,0:5:9:0,9,82	0/0:22,0:22:41.25:0,41,368	0/0:12,0:12:26.99:0,27,244	0/0:23,0:22:53.98:0,54,480	0/0:27,0:27:69.03:0,69,632	0/0:15,0:15:36.02:0,36,329	0/0:40,0:40:99:0,105,954	0/0:16,0:16:42.02:0,42,384	0/0:19,0:19:23.99:0,24,412	0/0:18,0:18:42.01:0,42,384	0/0:14,0:14:39.01:0,39,352	0/0:23,0:23:60.02:0,60,545	0/0:21,0:20:54.03:0,54,494	0/0:23,0:23:63.03:0,63,577	0/0:28,0:28:75.04:0,75,686	0/0:21,0:21:57.03:0,57,521	0/0:15,0:15:37.24:0,37,346	1/1:3,15:18:42.10:464,42,0	1/1:1,16:18:48.10:538,48,0	1/1:5,14:19:39.12:450,39,0	0/0:10,0:10:24.01:0,24,220	0/0:14,0:14:23.66:0,24,242	0/0:14,0:14:39.02:0,39,357	0/0:18,0:18:54.01:0,54,488	0/0:29,0:29:78.03:0,78,714	1/1:3,22:24:29.70:596,30,0	0/0:7,0:7:12:0,12,110
chr10	48724697	.	A	ATC	6119.31	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=11.723;DP=746;FS=6.665;HRun=0;HaplotypeScore=99.9099;InbreedingCoeff=0.9998;MQ=79.98;MQ0=0;MQRankSum=-4.093;QD=42.20;ReadPosRankSum=-0.711;VQSLOD=6.2304;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:72.24:0,72,989	0/0:15,0:15:45.15:0,45,618	0/0:25,0:25:59.23:0,59,702	0/0:21,0:21:48.12:0,48,627	0/0:28,0:28:66.21:0,66,891	0/0:33,0:33:96.31:0,96,1303	0/0:11,0:11:27.09:0,27,370	1/1:7,27:34:87.30:1521,87,0	0/0:30,0:30:84.26:0,84,1136	0/0:44,0:44:99:0,129,1758	0/0:25,0:25:75.23:0,75,1010	0/0:26,0:26:78.26:0,78,1072	0/0:16,0:16:48.16:0,48,659	0/0:27,0:27:75.23:0,75,1012	0/0:38,0:38:99:0,105,1439	0/0:30,0:30:84.26:0,84,1136	0/0:28,0:28:81.27:0,81,1112	0/0:29,0:29:75.25:0,75,1030	1/1:6,17:23:57.18:974,57,0	1/1:1,29:30:75.26:1320,75,0	1/1:3,26:29:72.25:1267,72,0	0/0:27,0:27:72.15:0,72,964	0/0:24,0:24:66.22:0,66,906	0/0:21,0:21:63.15:0,63,827	0/0:27,0:27:81.27:0,81,1113	0/0:33,0:33:96.31:0,96,1304	1/1:6,22:29:60.20:1037,60,0	0/0:17,0:17:45.15:0,45,615
chr10	48724952	.	GA	G	2561.62	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=7.987;DP=509;FS=9.750;HRun=1;HaplotypeScore=51.0776;InbreedingCoeff=0.9295;MQ=62.94;MQ0=0;MQRankSum=-2.477;QD=35.58;ReadPosRankSum=1.139;VQSLOD=3.0524;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,114,1792	0/0:4,0:4:12.02:0,12,168	0/0:19,0:19:53.39:0,53,802	0/0:18,0:18:48.10:0,48,693	0/0:16,0:16:42.13:0,42,646	0/0:19,0:19:54.18:0,54,863	0/0:22,0:22:66.23:0,66,1055	0/0:32,0:32:93.27:0,93,1458	0/0:25,0:25:72.20:0,72,1123	0/0:16,0:16:48.16:0,48,746	0/0:5,0:5:12.04:0,12,192	0/0:20,0:20:60.20:0,60,958	0/0:27,0:27:75.24:0,75,1168	0/0:13,0:13:39.12:0,39,600	0/0:21,0:21:63.21:0,63,1007	0/0:26,0:26:78.27:0,78,1247	0/0:22,0:22:66.21:0,66,1029	0/0:26,0:26:78.22:0,78,1214	1/1:0,21:21:60.20:836,60,0	1/1:0,5:5:15.05:210,15,0	1/1:0,21:21:57.19:797,57,0	0/0:3,0:3:9.03:0,9,144	0/0:2,0:2:6.02:0,6,96	0/0:34,0:34:99:0,102,1602	0/0:6,0:6:18.06:0,18,288	0/0:16,0:16:48.16:0,48,767	1/1:0,25:25:63.21:877,63,0	0/0:6,0:6:15.05:0,15,240
chr10	48725098	.	C	CAG	485.45	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-2.697;DP=279;FS=1.187;HRun=0;HaplotypeScore=43.5860;InbreedingCoeff=0.5895;MQ=49.43;MQ0=16;MQRankSum=-3.667;QD=26.97;ReadPosRankSum=-1.551;VQSLOD=3.5090;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:24:48.11:0,48,724	0/0:2,0:2:6.01:0,6,76	0/0:6,0:1:2.90:0,3,16	0/0:7,0:2:0.47:0,0,1	0/0:10,0:10:12.47:0,12,167	0/0:10,0:7:15.05:0,15,235	0/0:10,0:6:15.05:0,15,242	1/1:4,13:15:36.04:579,36,0	0/0:2,0:2:6.02:0,6,98	0/0:6,0:6:18.05:0,18,272	0/0:4,0:4:8.99:0,9,118	0/0:11,0:11:30.06:0,30,457	0/0:8,0:8:24.08:0,24,382	0/0:9,0:8:21.04:0,21,288	0/0:6,0:6:12:0,12,164	0/0:7,0:7:21.04:0,21,314	0/0:26,0:26:54.18:0,54,870	0/0:13,0:13:21.07:0,21,341	0/0:16,0:11:24.08:0,24,371	0/0:8,0:8:15.05:0,15,244	0/0:11,0:11:33.11:0,33,534	0/0:7,0:6:15.05:0,15,245	0/0:6,0:6:15.05:0,15,231	0/0:18,0:17:48.16:0,48,777	0/0:6,0:6:15.02:0,15,215	0/0:8,0:8:17.85:0,18,258	0/0:9,0:9:17.85:0,18,278	0/0:9,0:9:12.51:0,13,196
chr10	48725251	.	A	AGCTGGGGT	1330.93	PASS	AC=6;AF=0.111;AN=54;BaseQRankSum=4.438;DP=337;FS=2.253;HRun=0;HaplotypeScore=102.3450;InbreedingCoeff=0.6984;MQ=72.67;MQ0=4;MQRankSum=-5.257;QD=83.18;ReadPosRankSum=1.848;VQSLOD=3.7426;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:22:36.14:0,36,954	0/0:1,0:1:3.01:0,3,58	0/0:57,0:22:30.28:0,30,467	0/0:57,0:15:23.79:0,24,203	0/0:10,0:10:17.85:0,18,359	0/0:8,0:8:21.07:0,21,416	0/0:15,0:15:36.59:0,37,719	0/0:8,0:3:3.01:0,3,60	0/0:3,0:3:9:0,9,136	0/0:9,0:9:20.89:0,21,309	0/0:6,0:6:12.02:0,12,229	0/0:12,0:12:30.02:0,30,500	0/0:3,0:3:9.03:0,9,180	0/0:14,0:13:39.10:0,39,723	0/0:6,0:6:12.04:0,12,219	0/0:7,0:7:18.03:0,18,310	0/0:10,0:10:24.08:0,24,481	0/0:15,0:15:42.09:0,42,766	1/1:3,1:4:6.02:177,6,0	1/1:0,3:3:6.02:259,6,0	./.	0/0:6,0:6:18.06:0,18,345	0/0:3,0:3:6.02:0,6,121	0/0:16,0:16:38.89:0,39,727	0/0:8,0:8:18.92:0,19,354	0/0:11,0:11:10.06:0,10,512	1/1:1,4:8:24.08:1019,24,0	0/0:6,0:5:12.04:0,12,220
chr10	48725267	.	CG	C	914.11	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=0.626;DP=363;FS=15.992;HRun=5;HaplotypeScore=75.7138;InbreedingCoeff=0.8751;MQ=63.07;MQ0=11;MQRankSum=-7.086;QD=16.04;ReadPosRankSum=-2.952;VQSLOD=1.6823;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:66.21:0,66,885	0/0:2,0:2:3.01:0,3,41	0/0:32,1:11:11.55:0,12,137	0/0:41,0:11:4.96:0,5,77	0/0:9,0:9:18.06:0,18,245	0/0:10,0:10:30.10:0,30,409	0/0:20,0:19:54.17:0,54,721	1/1:5,14:10:27.02:277,27,0	0/0:4,0:4:12.04:0,12,162	0/0:8,0:8:21.07:0,21,286	0/0:6,0:6:18.06:0,18,245	0/0:14,0:14:39.13:0,39,531	0/0:5,0:5:15:0,15,182	0/0:20,0:19:54.18:0,54,730	0/0:7,0:7:18.06:0,18,245	0/0:7,0:7:21.06:0,21,272	0/0:15,1:16:11.21:0,11,535	0/0:14,0:14:42.14:0,42,574	1/1:0,7:6:9.50:103,9,0	1/1:0,11:10:27.02:286,27,0	1/1:0,10:9:14.94:149,15,0	0/0:6,0:6:18.06:0,18,245	0/0:4,0:4:12.04:0,12,163	0/0:24,0:24:65.96:0,66,884	0/0:12,0:12:36.11:0,36,473	0/0:9,0:9:21.07:0,21,286	1/1:1,9:10:24.07:267,24,0	0/0:9,0:8:24.08:0,24,327
chr10	48726482	.	CA	C	1272.59	PASS	AB=0.809;AC=11;AF=0.196;AN=56;BaseQRankSum=10.210;DP=505;FS=4.683;HRun=10;HaplotypeScore=57.5375;InbreedingCoeff=0.4653;MQ=64.37;MQ0=18;MQRankSum=-1.772;QD=7.67;ReadPosRankSum=-1.705;VQSLOD=1.3395;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:23:57.63:0,58,631	0/0:9,0:9:24.06:0,24,260	0/1:32,0:13:20.98:21,0,90	0/1:24,1:9:2.61:3,0,54	0/0:22,0:22:38.94:0,39,412	0/0:17,1:19:24.91:0,25,479	0/0:23,0:23:57.11:0,57,604	1/1:8,17:21:44.89:373,45,0	0/0:14,0:14:27.49:0,27,357	0/0:19,0:19:45.08:0,45,478	0/0:20,0:19:27.06:0,27,290	0/0:14,0:15:35.76:0,36,360	0/0:9,0:9:24.06:0,24,265	0/0:16,0:16:39.10:0,39,423	0/0:12,1:13:7.03:0,7,304	0/0:12,0:12:24.06:0,24,258	0/0:29,0:29:72.17:0,72,777	0/0:23,0:23:69.06:0,69,734	0/1:7,9:14:6.37:181,0,6	1/1:7,14:21:38.98:338,39,0	1/1:6,9:15:38.96:332,39,0	0/0:5,0:5:9.02:0,9,100	0/0:12,0:12:30.07:0,30,323	0/0:21,3:24:11.05:0,11,571	0/0:14,0:13:30.06:0,30,315	0/0:15,1:16:10.04:0,10,339	0/1:5,13:18:36.18:178,0,36	0/1:11,1:10:8.01:8,0,148
chr10	48726597	.	CG	C	2582.26	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=9.687;DP=500;FS=4.286;HRun=4;HaplotypeScore=54.0535;InbreedingCoeff=0.9597;MQ=76.93;MQ0=1;MQRankSum=-1.622;QD=25.82;ReadPosRankSum=-0.065;VQSLOD=2.2703;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:57.19:0,57,797	0/0:3,0:3:9.03:0,9,126	0/0:24,0:23:54.15:0,54,731	0/0:18,1:19:42.07:0,42,542	0/0:12,0:12:36.12:0,36,503	0/0:17,0:17:51.16:0,51,697	0/0:28,0:28:84.28:0,84,1175	1/1:1,17:10:24.07:286,24,0	0/0:18,0:18:54.15:0,54,708	0/0:16,0:16:45.11:0,45,608	0/0:11,0:11:27.09:0,27,377	0/0:16,0:16:48.10:0,48,632	0/0:17,0:17:51.13:0,51,661	0/0:17,0:17:51.16:0,51,696	0/0:21,0:21:63.20:0,63,866	0/0:12,0:12:36.12:0,36,502	0/0:26,0:26:78.25:0,78,1075	0/0:41,0:41:99:0,117,1620	1/1:1,8:7:15.02:166,15,0	1/1:0,6:6:18.06:216,18,0	1/1:2,48:50:99:1583,132,0	0/0:9,0:9:24.08:0,24,336	0/0:4,0:4:9.03:0,9,126	0/0:30,0:30:84.20:0,84,1104	0/0:16,0:16:45.15:0,45,626	0/0:17,0:17:51.17:0,51,708	1/1:2,15:17:42.13:503,42,0	0/0:5,0:5:12.04:0,12,168
chr10	48727144	.	CAGATGCG	C	1185.15	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=8.614;DP=732;FS=1.629;HRun=0;HaplotypeScore=183.0227;InbreedingCoeff=0.9647;MQ=69.84;MQ0=0;MQRankSum=-6.315;QD=31.19;ReadPosRankSum=1.300;VQSLOD=3.4394;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,144,5661	0/0:15,0:15:45.15:0,45,1886	0/0:13,0:12:11.83:0,12,1129	0/0:21,0:21:37.09:0,37,1612	0/0:26,0:26:75.26:0,75,3011	0/0:19,0:19:57.18:0,57,2259	0/0:32,0:32:96.30:0,96,3679	0/0:36,0:36:99:0,108,4228	0/0:28,0:28:84.29:0,84,3441	0/0:33,0:33:98.70:0,99,3866	0/0:17,0:17:51.16:0,51,1898	0/0:47,0:47:99:0,141,5433	0/0:34,0:34:99:0,102,4105	0/0:41,0:41:99:0,123,4868	0/0:42,0:41:99:0,126,5134	0/0:30,0:30:90.31:0,90,3549	0/0:23,0:23:69.19:0,69,2570	0/0:17,0:17:45.15:0,45,1838	1/1:0,4:4:12.04:266,12,0	1/1:2,5:7:12.03:186,12,0	1/1:2,9:8:12.01:213,12,0	0/0:35,0:35:99:0,102,4166	0/0:15,0:15:42.14:0,42,1433	0/0:39,0:39:99:0,117,4739	0/0:21,0:21:63.22:0,63,2471	0/0:42,0:42:99:0,120,4875	1/1:2,14:16:33.99:673,34,0	0/0:20,0:20:60.21:0,60,2483
chr10	48727153	.	CACCT	C	458.46	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=7.625;DP=699;FS=1.829;HRun=0;HaplotypeScore=134.4738;InbreedingCoeff=0.9514;MQ=69.14;MQ0=0;MQRankSum=-7.605;QD=14.33;ReadPosRankSum=3.033;VQSLOD=3.4299;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,151,4331	0/0:15,0:15:45.15:0,45,1273	0/0:14,0:13:33.11:0,33,887	0/0:20,0:20:52.53:0,53,1319	0/0:28,0:28:81.28:0,81,2339	0/0:18,0:18:54.19:0,54,1514	0/0:33,0:33:99:0,99,2759	0/0:34,0:34:99:0,99,2715	0/0:30,0:30:90.31:0,90,2595	0/0:33,0:33:99:0,99,2841	0/0:14,0:14:42.14:0,42,1201	0/0:41,0:41:99:0,123,3549	0/0:34,0:34:99:0,102,2900	0/0:41,0:41:99:0,123,3514	0/0:40,0:39:99:0,120,3471	0/0:28,0:28:84.29:0,84,2411	0/0:18,0:18:54.19:0,54,1542	0/0:15,0:15:45.15:0,45,1287	1/1:0,4:4:12.03:129,12,0	1/1:0,5:5:6.01:61,6,0	1/1:0,9:6:11.92:106,12,0	0/0:34,0:34:99:0,102,2884	0/0:11,0:11:30.10:0,30,854	0/0:40,0:40:99:0,120,3374	0/0:20,0:20:60.21:0,60,1688	0/0:37,0:37:99:0,111,3152	1/1:0,14:14:30.54:310,31,0	0/0:19,0:19:57.20:0,57,1652
chr10	48727159	.	AGAGCTTCTTTG	A	1454.35	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=7.805;DP=683;FS=2.885;HRun=0;HaplotypeScore=227.6594;InbreedingCoeff=0.9517;MQ=67.34;MQ0=1;MQRankSum=-7.738;QD=45.45;ReadPosRankSum=2.697;VQSLOD=3.3196;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,163,9073	0/0:13,0:13:39.12:0,39,2133	0/0:12,0:11:33.11:0,33,1425	0/0:18,0:17:45.66:0,46,1947	0/0:28,0:28:84.29:0,84,4901	0/0:16,0:16:48.16:0,48,2823	0/0:29,0:29:87.30:0,87,4885	0/0:32,0:32:96.31:0,96,5079	0/0:29,0:29:87.28:0,87,4681	0/0:34,0:34:99:0,102,5237	0/0:12,0:12:36.12:0,36,2125	0/0:41,0:41:99:0,123,6369	0/0:33,0:33:99:0,99,5371	0/0:42,0:42:99:0,126,6845	0/0:42,0:41:99:0,126,7130	0/0:28,0:28:84.27:0,84,4778	0/0:17,0:17:51.16:0,51,2867	0/0:17,0:17:51.18:0,51,2955	1/1:0,4:4:12.04:330,12,0	1/1:0,5:5:6.02:162,6,0	1/1:0,9:6:12.02:269,12,0	0/0:34,0:34:99:0,99,5499	0/0:10,0:10:30.10:0,30,1772	0/0:36,0:36:99:0,105,5735	0/0:19,0:19:57.20:0,57,3110	0/0:36,0:36:99:0,108,6247	1/1:0,14:14:33.10:841,33,0	0/0:19,0:19:57.20:0,57,3173
chr10	48727715	.	CA	C	2056.88	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=4.784;DP=554;FS=17.631;HRun=5;HaplotypeScore=64.7037;InbreedingCoeff=0.9965;MQ=62.38;MQ0=0;MQRankSum=-2.097;QD=25.71;ReadPosRankSum=2.232;VQSLOD=2.0309;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:23:59.79:0,60,789	0/0:11,0:11:30.09:0,30,394	0/0:14,0:13:32.66:0,33,448	0/0:12,0:11:33.10:0,33,438	0/0:36,0:36:90.23:0,90,1196	0/0:26,0:25:57.19:0,57,778	0/0:13,0:13:36.08:0,36,471	0/0:29,0:29:84.28:0,84,1146	0/0:22,0:22:57.16:0,57,760	0/0:28,0:28:78.25:0,78,1051	0/0:19,0:19:48.09:0,48,602	1/1:2,24:25:66.19:747,66,0	1/1:1,18:19:54.15:611,54,0	0/0:11,0:11:27.02:0,27,346	0/0:21,0:18:39.09:0,39,512	0/0:17,0:16:45.14:0,45,595	0/0:30,0:30:81.27:0,81,1105	0/0:14,0:14:39.13:0,39,533	0/0:17,0:17:45.15:0,45,615	0/0:28,0:28:81.27:0,81,1108	0/0:11,0:11:33.11:0,33,451	1/1:0,10:10:18.05:204,18,0	1/1:3,14:17:39.09:432,39,0	1/1:1,7:7:21.06:237,21,0	0/0:22,0:22:54.15:0,54,718	0/0:18,0:17:45.14:0,45,601	0/0:30,0:29:87.20:0,87,1135	0/0:21,0:21:63.21:0,63,861
chr10	48727759	.	GT	G	784.54	PASS	AB=0.840;AC=11;AF=0.196;AN=56;BaseQRankSum=5.639;DP=477;FS=10.262;HRun=12;HaplotypeScore=59.2449;InbreedingCoeff=0.6401;MQ=57.63;MQ0=2;MQRankSum=-1.426;QD=8.92;ReadPosRankSum=-0.364;VQSLOD=1.4550;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:22:47.92:0,48,464	0/0:6,0:6:14.99:0,15,142	0/1:9,1:8:11.22:11,0,77	0/1:8,0:8:14.94:15,0,63	0/0:30,0:31:68.97:0,69,684	0/0:26,0:25:54.11:0,54,548	0/0:14,1:16:18.69:0,19,355	0/0:12,0:17:31.42:0,31,165	0/0:18,0:18:27.01:0,27,258	0/0:24,0:24:31.88:0,32,489	0/0:16,0:17:41.87:0,42,395	1/1:7,15:22:35.77:272,36,0	1/1:5,8:13:23.90:186,24,0	0/0:5,0:5:6.01:0,6,61	0/0:15,0:13:20.96:0,21,191	0/0:17,0:17:39.01:0,39,383	0/0:28,0:27:63.06:0,63,619	0/0:13,1:14:9.64:0,10,258	0/0:15,0:14:42.07:0,42,416	0/0:25,1:27:42.84:0,43,587	0/0:15,0:15:45.08:0,45,450	0/1:4,7:11:6.56:138,0,7	1/1:2,9:11:26.17:208,26,0	1/1:2,11:11:7.87:121,8,0	0/0:16,0:16:39.06:0,39,385	0/0:18,0:18:42.08:0,42,426	0/0:17,1:18:14.96:0,15,358	0/0:14,0:14:42.07:0,42,419
chr10	48727896	.	GAA	G	3126.33	PASS	AB=1.000;AC=43;AF=0.935;AN=46;BaseQRankSum=2.430;DP=224;FS=0.000;HRun=2;HaplotypeScore=60.3656;InbreedingCoeff=0.2169;MQ=34.59;MQ0=8;MQRankSum=-2.113;QD=14.75;ReadPosRankSum=2.580;VQSLOD=0.9266;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:10:11.86:128,12,0	1/1:9,0:9:14.88:145,15,0	./.	0/0:6,0:2:2.95:0,3,39	1/1:17,0:15:18.04:190,18,0	1/1:19,0:18:24.01:237,24,0	1/1:9,0:8:21.05:216,21,0	0/1:6,0:4:28.01:36,0,28	1/1:8,0:7:5.56:64,6,0	1/1:10,2:12:36.05:375,36,0	1/1:7,0:7:9.02:98,9,0	1/1:13,0:12:15.04:159,15,0	1/1:7,0:7:15.03:148,15,0	1/1:5,0:5:8.98:80,9,0	1/1:16,0:12:9.02:98,9,0	1/1:10,0:7:18.04:183,18,0	1/1:6,0:6:6.01:58,6,0	1/1:5,0:4:9:79,9,0	./.	./.	./.	1/1:6,0:6:9.02:91,9,0	1/1:7,2:9:18.05:224,18,0	1/1:5,0:3:3.01:32,3,0	1/1:15,1:14:24.06:261,24,0	1/1:11,0:10:30.05:295,30,0	./.	1/1:2,0:1:3.01:30,3,0
chr10	48727897	.	AAC	A	5071.60	PASS	AC=44;AF=0.957;AN=46;BaseQRankSum=0.696;DP=214;FS=4.383;HRun=0;HaplotypeScore=51.6745;InbreedingCoeff=0.3020;MQ=35.03;MQ0=7;MQRankSum=-1.732;QD=25.11;ReadPosRankSum=1.344;VQSLOD=5.3029;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,11:9:15.03:218,15,0	1/1:0,9:9:14.94:227,15,0	./.	0/0:6,0:2:2.90:0,3,18	1/1:0,17:15:18.06:292,18,0	1/1:0,17:16:24.08:379,24,0	1/1:0,9:8:21.07:342,21,0	1/1:2,2:2:6.02:89,6,0	1/1:0,8:7:5.82:97,6,0	1/1:2,10:12:36.12:584,36,0	1/1:0,6:6:9.03:146,9,0	1/1:0,13:12:15.05:244,15,0	1/1:0,7:7:15.05:239,15,0	1/1:0,5:5:9.03:135,9,0	1/1:0,16:12:9.03:146,9,0	1/1:0,9:7:18.06:293,18,0	1/1:0,6:6:6.02:98,6,0	1/1:0,5:4:9.03:142,9,0	./.	./.	./.	1/1:1,5:6:9.03:146,9,0	1/1:2,7:9:18.06:288,18,0	1/1:0,5:3:3.01:49,3,0	1/1:1,14:14:24.08:386,24,0	1/1:0,11:10:30.10:483,30,0	./.	1/1:0,2:1:3.01:49,3,0
chr10	48727930	.	G	GC	5279.19	PASS	AB=1.000;AC=47;AF=0.940;AN=50;BaseQRankSum=-3.115;DP=202;FS=0.000;HRun=2;HaplotypeScore=62.8645;InbreedingCoeff=0.2698;MQ=41.62;MQ0=0;MQRankSum=0.335;QD=28.23;ReadPosRankSum=1.926;VQSLOD=4.3986;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,11:11:18.06:287,18,0	1/1:0,4:4:9.03:143,9,0	0/0:14,0:3:4.24:0,4,27	0/1:12,0:4:1.11:12,0,1	1/1:0,10:9:15.05:234,15,0	1/1:0,15:15:27.09:421,27,0	1/1:1,6:6:6.02:96,6,0	1/1:0,4:4:12.04:189,12,0	1/1:1,7:8:6.02:94,6,0	1/1:1,14:15:39.13:618,39,0	1/1:1,5:5:9.03:143,9,0	1/1:0,11:11:18.06:287,18,0	1/1:0,3:3:9.03:143,9,0	1/1:0,4:4:8.88:143,9,0	1/1:0,9:9:15.05:239,15,0	1/1:1,8:9:24.04:354,24,0	1/1:0,9:9:18.06:285,18,0	1/1:2,3:5:2.25:130,2,0	./.	./.	1/1:3,0:3:2.90:16,3,0	1/1:0,5:5:15.05:235,15,0	1/1:1,10:10:27.09:422,27,0	1/1:0,3:3:6.02:95,6,0	1/1:0,7:7:12.04:191,12,0	1/1:1,9:10:27.07:404,27,0	./.	1/1:0,2:2:6.02:96,6,0
chr10	48727950	.	GT	G	794.22	PASS	AB=0.873;AC=27;AF=0.519;AN=52;BaseQRankSum=0.970;DP=317;FS=1.478;HRun=12;HaplotypeScore=77.4704;InbreedingCoeff=0.3261;MQ=59.15;MQ0=11;MQRankSum=0.427;QD=4.03;ReadPosRankSum=2.531;VQSLOD=1.0277;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:14,1:12:5.17:5,0,134	0/0:5,0:5:12.01:0,12,116	0/1:49,1:14:4.90:5,0,94	0/0:33,0:11:12.77:0,13,67	1/1:8,6:13:16.31:107,16,0	0/0:14,2:14:15.03:0,15,149	0/1:10,1:9:10.85:11,0,79	0/0:16,0:13:17.63:0,18,115	0/0:13,0:12:8.64:0,9,77	0/1:14,6:20:23.53:125,0,24	1/1:7,2:8:11.05:63,11,0	1/1:1,6:7:8.97:69,9,0	1/1:1,1:2:2.97:23,3,0	1/1:3,0:3:4.59:21,5,0	0/0:11,0:10:9.02:0,9,91	0/0:16,0:15:30:0,30,285	1/1:7,2:9:12.63:62,13,0	1/1:6,0:6:5.94:42,6,0	0/0:3,0:1:3.01:0,3,30	0/0:1,0:1:0.47:0,0,1	./.	1/1:1,7:7:17.89:135,18,0	0/1:6,5:10:39.70:94,0,40	1/1:2,2:4:5.98:46,6,0	0/1:7,2:9:10.63:32,0,11	1/1:9,5:12:7.25:110,7,0	./.	0/1:4,0:3:11.85:14,0,12
chr10	48727963	.	G	GT	932.62	PASS	AB=0.981;AC=17;AF=0.354;AN=48;BaseQRankSum=-1.214;DP=390;FS=21.028;HRun=12;HaplotypeScore=74.6793;InbreedingCoeff=0.3538;MQ=51.36;MQ0=35;MQRankSum=-0.863;QD=4.44;ReadPosRankSum=-0.797;VQSLOD=0.0348;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:15:29.83:0,30,234	0/0:5,0:5:11.95:0,12,93	0/1:54,0:13:0.04:0,0,46	0/0:33,0:9:7.55:0,8,42	1/1:23,1:22:13.75:178,14,0	0/0:13,0:11:14.65:0,15,108	0/0:15,0:12:19.30:0,19,123	0/1:17,0:14:1.44:1,0,22	0/0:13,0:11:7.60:0,8,104	1/1:22,1:20:41.63:329,42,0	1/1:15,1:15:1.91:109,2,0	0/0:12,0:8:14.14:0,14,95	0/0:4,0:3:5.94:0,6,42	1/1:3,2:5:9.94:51,10,0	0/0:10,0:6:8.98:0,9,73	0/0:18,0:15:0.01:0,0,156	0/1:11,1:11:1.08:100,0,1	0/1:10,0:7:11.59:12,0,15	./.	./.	./.	0/1:12,0:11:3.30:3,0,98	0/0:16,0:15:25.66:0,26,183	0/0:6,0:4:5.91:0,6,45	0/1:10,0:8:11.71:64,0,12	0/1:16,1:13:13.31:124,0,13	./.	1/1:8,2:8:16.49:115,16,0
chr10	48728111	.	G	GT	937.26	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-6.889;DP=532;FS=2.846;HRun=1;HaplotypeScore=57.8614;InbreedingCoeff=0.9929;MQ=70.31;MQ0=0;MQRankSum=-3.552;QD=37.49;ReadPosRankSum=-3.923;VQSLOD=2.4165;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:93.31:0,93,1296	0/0:7,0:7:21.07:0,21,291	0/0:22,0:22:63.07:0,63,806	0/0:16,0:16:43.69:0,44,581	0/0:15,0:14:36.12:0,36,503	0/0:16,0:15:30.10:0,30,420	0/0:22,0:22:57.14:0,57,759	1/1:1,24:25:69.19:1032,69,0	0/0:17,0:17:45.15:0,45,627	0/0:23,0:23:66.21:0,66,906	0/0:22,0:22:57.15:0,57,770	0/0:13,0:13:27.09:0,27,377	0/0:11,0:11:33.07:0,33,439	0/0:20,0:20:51.11:0,51,670	0/0:18,0:18:51.13:0,51,691	0/0:24,0:23:63.09:0,63,800	0/0:38,0:38:99:0,111,1534	0/0:17,0:17:51.13:0,51,691	0/0:17,0:17:51.17:0,51,711	0/0:16,0:16:42.05:0,42,543	0/0:14,0:14:33.11:0,33,461	0/0:19,0:19:57.17:0,57,755	0/0:14,0:14:36.08:0,36,481	0/0:29,0:29:87.28:0,87,1195	0/0:10,0:10:30.10:0,30,420	0/0:26,0:26:78.25:0,78,1074	0/0:16,0:14:41.98:0,42,565	0/0:11,0:11:33.11:0,33,461
chr10	48728197	.	G	GTTCTTT	6701.01	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-6.981;DP=563;FS=14.769;HRun=0;HaplotypeScore=114.8015;InbreedingCoeff=0.9785;MQ=76.39;MQ0=0;MQRankSum=-10.516;QD=78.84;ReadPosRankSum=-4.231;VQSLOD=3.7206;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,123,2871	0/0:6,0:6:12.04:0,12,252	0/0:20,0:19:57.19:0,57,1243	0/0:24,0:23:66.13:0,66,1326	0/0:13,0:13:30.06:0,30,669	0/0:20,0:20:57.19:0,57,1369	0/0:19,0:19:57.17:0,57,1254	1/1:8,25:37:99:3130,102,0	0/0:23,0:23:63.17:0,63,1448	0/0:22,0:22:60.19:0,60,1392	0/0:19,0:19:45.11:0,45,950	0/0:21,0:21:60.20:0,60,1355	0/0:15,0:15:45.15:0,45,1044	0/0:24,0:24:69.09:0,69,1448	0/0:30,0:30:87.21:0,87,1976	0/0:24,0:24:66.21:0,66,1435	0/0:40,0:40:99:0,117,2798	0/0:16,0:16:45.15:0,45,1056	1/1:1,7:8:24.07:776,24,0	1/1:2,13:16:39.08:1266,39,0	1/1:3,3:7:9.03:255,9,0	0/0:22,0:22:66.22:0,66,1519	0/0:14,0:14:36.11:0,36,814	0/0:18,0:18:54.10:0,54,1184	0/0:13,0:12:33.11:0,33,793	0/0:17,0:17:48.16:0,48,1152	1/1:2,11:13:35.99:1274,36,0	0/0:15,0:14:42.14:0,42,1005
chr10	48728604	.	AG	A	6877.50	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-1.968;DP=304;FS=0.000;HRun=3;HaplotypeScore=34.7567;InbreedingCoeff=0.4894;MQ=51.61;MQ0=3;MQRankSum=1.376;QD=24.48;ReadPosRankSum=2.240;VQSLOD=3.9528;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,18:17:33.10:408,33,0	1/1:0,3:3:6.02:74,6,0	0/0:9,2:3:0.89:0,1,21	0/0:10,2:3:2.37:0,2,8	1/1:1,5:6:14.98:165,15,0	1/1:5,5:9:23.96:235,24,0	1/1:0,8:6:6.02:74,6,0	1/1:3,0:3:5.19:20,5,0	1/1:0,12:11:18.06:223,18,0	1/1:4,5:9:24.01:259,24,0	1/1:2,6:8:15.46:169,15,0	1/1:0,6:6:12.04:148,12,0	1/1:0,9:9:18.06:223,18,0	1/1:4,8:11:12.04:149,12,0	1/1:0,14:14:33.10:409,33,0	1/1:1,17:18:36.11:446,36,0	1/1:0,25:25:48.15:589,48,0	1/1:1,11:12:27.08:335,27,0	1/1:2,11:13:32.94:369,33,0	1/1:2,4:5:11.92:111,12,0	1/1:1,13:13:27.08:334,27,0	1/1:0,2:2:6.02:74,6,0	1/1:0,9:9:24.07:290,24,0	1/1:1,10:10:27:303,27,0	1/1:0,13:13:30.09:364,30,0	1/1:1,24:25:66.09:773,66,0	1/1:0,8:7:18.06:223,18,0	1/1:0,5:5:9.03:111,9,0
chr10	48728667	.	AG	A	4293.17	PASS	AB=0.744;AC=50;AF=0.926;AN=54;BaseQRankSum=-2.231;DP=258;FS=2.340;HRun=5;HaplotypeScore=53.4940;InbreedingCoeff=0.0871;MQ=57.87;MQ0=3;MQRankSum=-1.800;QD=18.43;ReadPosRankSum=0.146;VQSLOD=4.2614;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:4,10:13:19.10:183,0,19	1/1:0,4:4:9.03:102,9,0	0/1:17,2:8:35.56:36,0,65	0/0:19,1:9:1.88:0,2,33	1/1:2,12:13:12.03:136,12,0	1/1:1,18:18:36.10:408,36,0	1/1:3,9:12:33.08:363,33,0	1/1:3,10:12:30.09:340,30,0	1/1:1,8:9:21.06:237,21,0	1/1:2,4:4:6.02:68,6,0	1/1:0,3:3:3.01:34,3,0	1/1:1,6:6:15.04:169,15,0	1/1:2,5:7:8.98:88,9,0	1/1:1,4:3:3.01:33,3,0	1/1:3,4:7:12.02:128,12,0	1/1:2,7:9:18.05:204,18,0	1/1:3,8:9:6.02:68,6,0	./.	1/1:0,12:12:33.09:374,33,0	1/1:2,1:2:3.01:34,3,0	1/1:0,6:5:9.03:102,9,0	1/1:1,3:4:6.02:68,6,0	1/1:0,5:4:3.01:34,3,0	1/1:0,7:6:15.04:170,15,0	1/1:1,11:12:27.08:305,27,0	1/1:0,8:7:18.05:204,18,0	1/1:2,12:12:30.08:339,30,0	1/1:0,3:3:6.02:68,6,0
chr10	48728711	.	A	AG	3647.75	PASS	AC=50;AF=0.962;AN=52;BaseQRankSum=-2.506;DP=207;FS=0.000;HRun=0;HaplotypeScore=36.8534;InbreedingCoeff=0.2462;MQ=51.65;MQ0=11;MQRankSum=-2.943;QD=25.51;ReadPosRankSum=2.253;VQSLOD=4.6156;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,9:8:11.96:155,12,0	1/1:0,3:3:6.02:80,6,0	./.	0/0:38,0:6:8.99:0,9,103	1/1:0,13:12:12.04:156,12,0	1/1:0,6:5:3.01:44,3,0	1/1:0,4:4:12.04:180,12,0	1/1:1,6:6:15.05:237,15,0	1/1:1,4:4:11.96:155,12,0	1/1:1,4:5:11.87:153,12,0	1/1:0,5:5:12.04:174,12,0	1/1:0,4:3:9.03:127,9,0	1/1:0,4:4:6.02:92,6,0	./.	1/1:1,5:5:9.03:136,9,0	1/1:1,4:5:9.03:137,9,0	1/1:0,7:5:3.01:48,3,0	1/1:1,2:3:3.01:48,3,0	1/1:0,10:10:30.10:475,30,0	1/1:0,2:2:5.99:65,6,0	1/1:0,5:4:3.01:48,3,0	1/1:0,4:4:9.03:130,9,0	1/1:0,8:7:5.51:51,6,0	1/1:0,2:1:3.01:47,3,0	1/1:0,8:8:18.06:264,18,0	1/1:0,5:5:15.05:234,15,0	1/1:0,9:9:23.44:319,23,0	1/1:0,3:3:6.02:95,6,0
chr10	48728716	.	AG	A	2557.47	PASS	AB=0.571;AC=49;AF=0.942;AN=52;BaseQRankSum=-2.045;DP=222;FS=0.000;HRun=3;HaplotypeScore=41.1988;InbreedingCoeff=0.2654;MQ=49.99;MQ0=19;MQRankSum=-2.900;QD=17.52;ReadPosRankSum=2.180;VQSLOD=3.0080;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,9:8:12.04:143,12,0	1/1:0,2:2:6.01:59,6,0	./.	0/0:46,0:6:0.99:0,1,74	1/1:0,13:12:14.98:143,15,0	1/1:1,5:5:3.01:34,3,0	1/1:1,4:4:12.03:137,12,0	1/1:1,5:5:12.04:146,12,0	1/1:2,3:4:8.51:77,9,0	1/1:0,5:5:11.77:120,12,0	1/1:0,5:5:12.03:131,12,0	1/1:0,4:3:9.02:95,9,0	1/1:0,4:4:5.98:53,6,0	./.	1/1:1,6:6:11.94:105,12,0	1/1:3,2:5:11.95:108,12,0	0/1:2,6:6:0.02:0,0,0	1/1:1,1:2:1.82:5,2,0	1/1:0,10:10:30.09:364,30,0	1/1:1,2:3:8.80:66,9,0	1/1:2,3:4:2.96:19,3,0	1/1:0,4:4:9.02:98,9,0	1/1:0,8:7:4.25:34,4,0	1/1:3,1:3:2.98:21,3,0	1/1:0,8:8:18.05:200,18,0	1/1:0,5:5:15.04:177,15,0	1/1:1,8:9:22.61:239,23,0	1/1:0,3:3:6.02:73,6,0
chr10	48729119	.	C	CTAAA	1818.91	PASS	AC=8;AF=0.154;AN=52;BaseQRankSum=2.167;DP=259;FS=1.998;HRun=0;HaplotypeScore=57.1197;InbreedingCoeff=0.7872;MQ=46.46;MQ0=13;MQRankSum=-3.304;QD=47.87;ReadPosRankSum=0.729;VQSLOD=3.6837;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:75.24:0,75,1347	./.	0/0:6,0:1:3.01:0,3,55	0/0:17,0:9:20.66:0,21,341	./.	0/0:9,0:9:24.07:0,24,410	0/0:12,0:12:30.10:0,30,552	0/0:18,0:15:36.11:0,36,623	0/0:6,0:6:18.06:0,18,329	0/0:8,0:8:21.04:0,21,350	0/0:4,0:4:6.01:0,6,80	0/0:13,0:13:36.12:0,36,662	0/0:7,0:7:18.06:0,18,330	0/0:18,0:18:48.16:0,48,873	0/0:5,0:5:15.05:0,15,259	0/0:8,0:8:18.06:0,18,331	0/0:15,0:15:36.12:0,36,662	0/0:14,0:14:33.11:0,33,583	1/1:5,3:6:12.04:315,12,0	1/1:2,2:4:9.03:120,9,0	1/1:4,14:18:45.14:1058,45,0	0/0:2,0:2:6.02:0,6,110	0/0:1,0:1:3.01:0,3,55	0/0:15,0:15:39.11:0,39,685	0/0:4,0:4:12.04:0,12,214	0/0:7,0:7:21.07:0,21,386	1/1:0,7:8:18.06:474,18,0	0/0:2,0:2:6.02:0,6,110
chr10	48729382	.	C	CG	773.19	PASS	AC=8;AF=0.154;AN=52;BaseQRankSum=-0.690;DP=367;FS=0.000;HRun=2;HaplotypeScore=51.1993;InbreedingCoeff=0.8632;MQ=42.79;MQ0=24;MQRankSum=-1.080;QD=15.46;ReadPosRankSum=-0.393;VQSLOD=3.0780;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:21:42.01:0,42,459	0/0:3,0:2:3.01:0,3,37	./.	./.	0/0:11,0:10:24.01:0,24,253	0/0:12,0:11:33.10:0,33,396	0/0:20,0:14:24.01:0,24,276	0/0:18,0:18:54.11:0,54,630	0/0:12,0:12:33.10:0,33,396	0/0:11,0:11:17.41:0,17,188	0/0:7,0:7:12.04:0,12,148	0/0:23,0:21:50.49:0,50,566	0/0:18,0:18:48.10:0,48,553	0/0:13,0:13:21:0,21,220	0/0:12,0:12:30.02:0,30,311	0/0:8,0:8:15.03:0,15,172	0/0:30,0:27:36.56:0,37,422	0/0:14,0:13:35.84:0,36,380	1/1:5,14:16:36.04:470,36,0	1/1:2,5:6:5.98:63,6,0	1/1:3,7:9:12.03:172,12,0	0/0:8,0:8:21.05:0,21,247	0/0:8,0:6:9.03:0,9,111	0/0:28,0:26:47.99:0,48,507	0/0:8,0:8:14.84:0,15,162	0/0:11,0:10:26.44:0,26,292	1/1:0,14:14:15.05:214,15,0	0/0:11,0:6:12.04:0,12,148
chr10	48729413	.	AAC	A	1859.97	PASS	AB=0.961;AC=20;AF=0.357;AN=56;BaseQRankSum=-4.130;DP=498;FS=15.043;HRun=0;HaplotypeScore=77.0809;InbreedingCoeff=0.1633;MQ=55.72;MQ0=21;MQRankSum=-7.101;QD=6.62;ReadPosRankSum=-6.539;VQSLOD=-0.3036;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:36,0:34:10.92:11,0,344	0/0:4,0:3:6.47:0,6,66	0/1:25,0:9:12.78:13,0,70	0/0:23,1:8:2.43:0,2,28	0/1:14,0:13:24.01:90,0,24	0/1:14,0:13:42.07:42,0,135	0/0:15,0:13:17.47:0,17,223	1/1:28,0:28:49.88:497,50,0	0/0:11,0:11:22.74:0,23,173	0/1:15,0:15:10:78,0,10	0/1:13,0:13:0.56:99,0,1	0/0:25,0:23:20.55:0,21,183	0/0:19,0:19:16.28:0,16,164	0/1:9,16:24:27.58:28,0,29	0/0:21,0:21:11.17:0,11,269	0/0:14,0:13:3.24:0,3,187	0/0:30,0:30:2.77:0,3,79	0/1:24,0:22:22.98:129,0,23	1/1:16,0:13:34.87:259,35,0	1/1:6,0:6:5.93:40,6,0	1/1:10,1:11:23.76:175,24,0	0/0:6,0:6:14.29:0,14,73	0/0:14,0:12:11.56:0,12,108	0/0:29,0:28:49.63:0,50,273	0/1:12,0:12:49.06:49,0,51	0/1:23,0:21:34.19:171,0,34	1/1:19,0:18:49.44:358,49,0	0/0:5,0:2:5.97:0,6,45
chr10	48729720	.	TG	T	668.73	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.003;DP=688;FS=6.782;HRun=5;HaplotypeScore=79.9222;InbreedingCoeff=0.9949;MQ=83.85;MQ0=0;MQRankSum=-1.376;QD=24.77;ReadPosRankSum=-3.268;VQSLOD=1.5453;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,120,1617	0/0:9,0:9:27.09:0,27,369	0/0:25,0:25:67.89:0,68,775	0/0:28,0:28:54.56:0,55,715	0/0:28,0:28:69.20:0,69,904	0/0:24,0:24:69.23:0,69,942	0/0:27,0:27:78.24:0,78,1042	1/1:2,25:25:69.17:764,69,0	0/0:17,0:17:51.17:0,51,698	0/0:36,0:36:90.03:0,90,1188	0/0:22,0:22:60.16:0,60,796	0/0:17,0:17:42.14:0,42,573	0/0:16,0:16:48.15:0,48,641	0/0:19,0:19:57.19:0,57,771	0/0:18,0:18:48.16:0,48,657	0/0:24,0:24:72.23:0,72,967	0/0:37,0:37:99:0,102,1378	0/0:34,0:33:60.58:0,61,1186	0/0:18,0:18:45.15:0,45,606	0/0:29,0:29:72.24:0,72,978	0/0:42,0:42:84.20:0,84,1108	0/0:18,0:18:51.17:0,51,698	0/0:23,0:23:63.21:0,63,859	0/0:37,0:37:96.78:0,97,1287	0/0:23,0:23:66.22:0,66,899	0/0:23,0:23:69.22:0,69,916	0/0:17,0:17:48.16:0,48,653	0/0:7,0:7:21.07:0,21,287
chr10	48729809	.	A	AGGGCTGTGTGG	686	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=2.691;DP=593;FS=1.271;HRun=0;HaplotypeScore=175.4810;InbreedingCoeff=0.7655;MQ=62.36;MQ0=6;MQRankSum=-3.999;QD=9.15;ReadPosRankSum=-1.063;VQSLOD=2.2978;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:57.12:0,57,1497	0/0:5,0:5:9.03:0,9,267	0/0:36,0:20:4.85:0,5,989	0/0:38,0:19:24.41:0,24,657	0/0:15,0:15:27:0,27,559	0/0:13,0:13:12.99:0,13,809	0/0:38,0:36:69.16:0,69,1828	1/1:10,0:8:6:53,6,0	0/0:16,0:16:42.11:0,42,1214	0/0:19,0:19:41.70:0,42,902	0/0:8,0:8:9.03:0,9,298	0/0:25,0:25:57.12:0,57,1427	0/0:13,0:13:30.10:0,30,969	0/0:24,0:23:41.93:0,42,1042	0/0:21,0:21:45.12:0,45,1290	0/0:28,0:28:63.18:0,63,1875	0/0:30,0:30:72.65:0,73,2020	0/0:31,0:30:72.10:0,72,1963	1/1:6,2:6:6.02:327,6,0	1/1:2,5:7:3.01:92,3,0	1/1:13,30:43:5.98:186,6,0	0/0:14,0:14:36.10:0,36,970	0/0:16,0:16:30.06:0,30,774	0/0:60,0:59:99:0,138,4110	0/0:17,0:17:24.03:0,24,477	0/0:14,0:14:27.09:0,27,875	1/1:5,0:5:3.01:166,3,0	0/0:9,0:9:18.04:0,18,525
chr10	48730634	.	G	GTCC	409.02	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.200;DP=730;FS=13.832;HRun=0;HaplotypeScore=106.1939;InbreedingCoeff=0.8184;MQ=62.86;MQ0=3;MQRankSum=-5.069;QD=31.46;ReadPosRankSum=-1.342;VQSLOD=2.9166;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,129,2267	0/0:11,0:11:33.10:0,33,571	0/0:30,0:25:75.09:0,75,1318	0/0:28,0:26:74.98:0,75,1242	0/0:22,0:22:57.20:0,57,1062	0/0:21,0:21:1.64:0,2,964	0/0:37,0:37:99:0,108,1957	1/1:3,10:11:24.06:502,24,0	0/0:27,0:27:78.27:0,78,1454	0/0:19,0:19:51.15:0,51,890	0/0:10,0:10:24.08:0,24,435	0/0:26,0:26:78.27:0,78,1440	0/0:30,0:30:87.28:0,87,1586	0/0:28,0:28:84.29:0,84,1541	0/0:38,0:38:99:0,108,2006	0/0:32,0:32:96.32:0,96,1751	0/0:44,0:44:99:0,126,2315	0/0:29,0:29:87.25:0,87,1555	0/0:25,0:23:62.56:0,63,1089	0/0:18,0:18:42.14:0,42,781	0/0:45,0:45:99:0,126,2295	0/0:25,0:25:69.22:0,69,1232	0/0:18,0:18:36.12:0,36,666	0/0:30,0:30:90.29:0,90,1638	0/0:24,0:24:66.23:0,66,1230	0/0:21,0:21:63.21:0,63,1143	0/0:24,0:24:69.07:0,69,1201	0/0:8,0:8:24.08:0,24,447
chr10	48730709	.	GTCTC	G	1311.69	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.305;DP=748;FS=3.484;HRun=0;HaplotypeScore=128.1408;InbreedingCoeff=0.9977;MQ=76.02;MQ0=1;MQRankSum=-6.050;QD=40.99;ReadPosRankSum=-3.681;VQSLOD=3.2772;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,151,3818	0/0:12,0:12:33.11:0,33,829	0/0:36,0:33:79.42:0,79,1795	0/0:47,0:39:78.56:0,79,1831	0/0:21,0:21:63.21:0,63,1535	0/0:22,0:22:45.15:0,45,1060	0/0:20,0:20:54.19:0,54,1356	1/1:4,28:32:84.26:1407,84,0	0/0:26,0:26:75.23:0,75,1821	0/0:25,0:25:75.26:0,75,1937	0/0:20,0:20:51.18:0,51,1316	0/0:31,0:31:87.30:0,87,2217	0/0:18,0:18:51.18:0,51,1316	0/0:26,0:26:75.26:0,75,1905	0/0:36,0:35:96.31:0,96,2419	0/0:26,0:26:72.25:0,72,1815	0/0:32,0:32:93.32:0,93,2381	0/0:20,0:20:51.18:0,51,1316	0/0:26,0:26:60.20:0,60,1456	0/0:22,0:22:63.21:0,63,1574	0/0:31,0:31:87.30:0,87,2228	0/0:24,0:24:69.22:0,69,1701	0/0:22,0:22:63.22:0,63,1558	0/0:27,0:27:72.20:0,72,1791	0/0:18,0:18:51.18:0,51,1312	0/0:30,0:29:84.29:0,84,2135	0/0:36,0:36:99:0,102,2603	0/0:8,0:8:24.08:0,24,620
chr10	48732254	.	C	CG	4164.57	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-7.942;DP=569;FS=11.368;HRun=2;HaplotypeScore=91.4493;InbreedingCoeff=0.9950;MQ=80.47;MQ0=0;MQRankSum=-1.857;QD=36.53;ReadPosRankSum=-1.812;VQSLOD=2.3721;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:96.29:0,96,1176	0/0:9,0:9:24.07:0,24,297	0/0:25,0:25:69.13:0,69,825	0/0:23,0:23:57.09:0,57,663	0/0:28,0:28:75.24:0,75,927	0/0:21,0:21:54.17:0,54,668	0/0:26,0:26:69.21:0,69,850	1/1:5,31:36:93.28:1283,93,0	0/0:21,0:21:57.18:0,57,705	0/0:23,0:23:66.19:0,66,793	0/0:18,0:18:54.17:0,54,668	0/0:26,0:26:59.75:0,60,741	0/0:15,0:15:38.99:0,39,481	0/0:17,0:17:42.13:0,42,519	0/0:26,0:26:68.62:0,69,852	0/0:18,0:18:32.97:0,33,408	0/0:20,0:20:54.17:0,54,668	0/0:8,0:8:21.02:0,21,243	1/1:0,15:15:39.12:545,39,0	1/1:3,18:21:52.24:700,52,0	1/1:1,28:29:75.25:1077,75,0	0/0:17,0:17:36.11:0,36,446	0/0:19,0:19:29.25:0,29,402	0/0:6,0:6:18.06:0,18,223	0/0:9,0:9:24.07:0,24,297	0/0:29,0:29:87.27:0,87,1077	1/1:0,13:13:39.13:559,39,0	0/0:9,0:9:21.06:0,21,260
chr10	48732935	.	TA	T	4930.82	PASS	AB=0.804;AC=29;AF=0.518;AN=56;BaseQRankSum=3.350;DP=535;FS=5.045;HRun=11;HaplotypeScore=71.0407;InbreedingCoeff=0.8154;MQ=65.19;MQ0=0;MQRankSum=1.273;QD=16.49;ReadPosRankSum=3.873;VQSLOD=5.9077;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:27:65.32:0,65,697	0/1:5,1:7:3.76:4,0,153	0/0:13,0:8:13.70:0,14,108	0/0:14,0:13:7.91:0,8,157	1/1:4,38:43:99:816,101,0	0/0:26,0:26:75.18:0,75,792	0/0:9,0:9:24.02:0,24,244	0/0:30,0:30:60.11:0,60,614	0/0:16,1:18:17.37:0,17,374	1/1:3,21:24:59.88:488,60,0	1/1:8,18:26:24.93:410,25,0	1/1:4,10:15:29:228,29,0	1/1:1,10:11:29.96:246,30,0	1/1:1,16:17:35.96:296,36,0	0/0:27,2:29:47.62:0,48,709	0/0:21,0:22:36.30:0,36,557	0/1:3,17:21:19.98:257,0,20	1/1:2,5:7:14.98:123,15,0	0/0:9,0:9:20.98:0,21,142	0/0:23,0:23:27.67:0,28,182	0/1:9,0:9:1.37:1,0,36	1/1:2,16:19:11.99:294,12,0	1/1:5,17:22:47.94:394,48,0	1/1:3,19:22:44.95:369,45,0	1/1:3,21:24:47.92:394,48,0	1/1:1,15:16:44.90:363,45,0	0/0:15,0:15:25.17:0,25,144	1/1:0,16:16:29.97:246,30,0
chr10	48732941	.	A	AC	162.10	PASS	AB=0.813;AC=4;AF=0.071;AN=56;BaseQRankSum=5.764;DP=550;FS=27.408;HRun=0;HaplotypeScore=91.9634;InbreedingCoeff=-0.0774;MQ=65.63;MQ0=0;MQRankSum=-4.676;QD=2.22;ReadPosRankSum=-1.550;VQSLOD=0.6670;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:69.95:0,70,942	0/0:8,0:8:18.79:0,19,248	0/0:18,0:11:20.65:0,21,228	0/0:16,0:14:28.89:0,29,346	0/0:46,0:46:99:0,128,880	0/0:25,0:25:75.24:0,75,1026	0/0:14,0:14:42.01:0,42,466	0/0:28,0:28:75.12:0,75,900	0/0:15,0:15:40.70:0,41,539	0/0:23,0:23:68.12:0,68,469	0/0:22,0:22:62.37:0,62,450	0/0:12,0:12:32.65:0,33,225	0/0:10,0:10:29.67:0,30,201	0/0:17,0:17:38.61:0,39,268	0/0:27,0:27:78.18:0,78,1026	0/0:21,0:21:58.57:0,59,784	0/0:22,0:22:53.54:0,54,413	0/0:6,0:6:17.81:0,18,121	0/1:13,3:16:18.71:19,0,107	0/1:15,7:21:60.73:149,0,61	0/1:12,2:14:23.19:23,0,65	0/0:20,0:20:53.46:0,53,387	0/0:19,0:19:53.44:0,53,368	0/0:21,0:21:50.51:0,51,354	0/0:25,0:25:59.39:0,59,411	0/0:20,0:20:56.53:0,57,411	0/1:15,6:21:79.71:80,0,94	0/0:16,0:16:29.67:0,30,201
chr10	48732942	.	A	AAAACAAAAC	3860.19	PASS	AB=0.893;AC=7;AF=0.125;AN=56;BaseQRankSum=-0.354;DP=562;FS=30.086;HRun=0;HaplotypeScore=173.4934;InbreedingCoeff=-0.1151;MQ=67.88;MQ0=0;MQRankSum=-3.984;QD=32.99;ReadPosRankSum=-4.902;VQSLOD=0.6299;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:75.09:0,75,1562	0/0:8,0:8:24.05:0,24,503	0/0:21,0:14:12.67:0,13,169	0/0:16,0:14:15.30:0,15,453	0/0:48,0:48:48.46:0,48,2094	0/0:25,0:25:75.24:0,75,1886	0/0:14,0:14:42.12:0,42,783	0/0:27,0:27:69.19:0,69,1368	0/0:16,0:16:41.93:0,42,999	0/0:24,0:24:14.27:0,14,1105	0/1:22,0:22:83.23:83,0,799	0/0:11,0:11:30.10:0,30,645	0/0:10,0:10:5.43:0,5,524	0/0:17,0:17:14.40:0,14,675	0/0:28,0:28:78.25:0,78,1852	0/0:22,0:22:36.52:0,37,1196	0/0:23,0:23:29.48:0,29,997	0/1:6,0:6:6.41:6,0,285	0/1:13,3:16:90.28:717,0,90	0/1:15,7:21:42.90:1042,0,43	0/1:12,2:14:6.68:611,0,7	0/0:21,0:21:1.07:0,1,847	0/0:21,0:21:26.57:0,27,1002	0/0:22,0:22:51.15:0,51,1034	0/0:24,0:24:1.78:0,2,817	0/0:20,0:20:13.66:0,14,893	0/1:15,5:21:15.39:1381,0,15	0/1:16,0:16:19.19:19,0,495
chr10	48734836	.	C	CT	4238.97	PASS	AB=0.592;AC=17;AF=0.304;AN=56;BaseQRankSum=-9.606;DP=632;FS=5.468;HRun=11;HaplotypeScore=59.7483;InbreedingCoeff=0.9317;MQ=63.43;MQ0=3;MQRankSum=0.200;QD=18.84;ReadPosRankSum=1.529;VQSLOD=6.0883;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:59.74:0,60,464	0/0:13,0:13:29.87:0,30,232	0/0:21,0:15:27.05:0,27,178	0/0:11,0:7:9.53:0,10,55	1/1:4,20:24:36.99:476,37,0	0/0:30,0:30:71.69:0,72,557	0/0:14,0:15:40.89:0,41,308	0/0:31,0:33:60.78:0,61,451	0/0:16,0:16:41.83:0,42,325	0/1:9,19:29:0.77:515,0,1	1/1:7,31:38:67.02:854,67,0	0/0:27,0:29:81.75:0,82,612	0/0:16,0:16:41.81:0,42,325	1/1:6,14:20:9.83:281,10,0	0/0:19,0:19:50.79:0,51,393	0/0:26,0:26:62.72:0,63,485	1/1:4,18:22:36.07:365,36,0	1/1:8,14:25:14.53:334,15,0	0/0:20,0:18:38.84:0,39,301	0/0:30,1:32:20.81:0,21,484	0/0:9,0:9:23.91:0,24,186	0/0:15,0:16:43.87:0,44,331	0/0:26,1:30:35.38:0,35,423	0/0:9,0:9:17.90:0,18,139	1/1:3,23:27:36.72:539,37,0	1/1:7,26:34:54.69:692,55,0	0/0:33,0:36:95.62:0,96,697	1/1:0,6:6:18.04:183,18,0
chr10	48736058	.	TCACA	T	1437.64	PASS	AB=0.815;AC=21;AF=0.438;AN=48;BaseQRankSum=0.082;DP=505;FS=5.063;HRun=0;HaplotypeScore=90.6438;InbreedingCoeff=0.7042;MQ=64.36;MQ0=10;MQRankSum=-0.214;QD=7.99;ReadPosRankSum=1.407;VQSLOD=2.1030;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:20:24.08:0,24,435	0/0:8,0:7:12.04:0,12,272	./.	0/0:43,0:27:0:0,0,0	./.	0/0:12,0:12:18.53:0,19,355	0/0:23,0:23:21.07:0,21,422	0/0:22,0:22:3.06:0,3,8	0/0:17,0:23:21.05:0,21,390	1/1:15,0:15:6:56,6,0	1/1:4,1:6:3.01:33,3,0	1/1:14,5:19:20.79:302,21,0	1/1:8,1:11:6.01:74,6,0	1/1:8,7:16:24.08:360,24,0	0/0:24,0:25:17.80:0,18,308	0/0:23,0:23:18.06:0,18,377	1/1:20,3:25:15.04:213,15,0	0/1:17,5:21:2.62:126,0,3	0/0:8,0:9:2.74:0,3,12	0/0:7,0:8:8.77:0,9,110	0/0:33,0:32:20.73:0,21,317	./.	1/1:5,2:7:3.01:46,3,0	1/1:22,9:31:18.48:277,18,0	1/1:12,6:18:6.02:93,6,0	1/1:9,0:10:3:28,3,0	0/0:19,0:21:26.56:0,27,476	./.
chr10	48736111	.	ATCTG	A	893.30	PASS	AB=0.808;AC=2;AF=0.036;AN=56;BaseQRankSum=3.478;DP=597;FS=15.317;HRun=0;HaplotypeScore=121.0555;InbreedingCoeff=-0.0370;MQ=56.04;MQ0=25;MQRankSum=3.861;QD=8.12;ReadPosRankSum=-2.306;VQSLOD=1.6307;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:62.87:0,63,1263	0/0:3,0:3:6.02:0,6,86	0/0:51,0:10:21.07:0,21,350	0/1:73,0:24:2.74:3,0,299	0/0:15,0:15:33.11:0,33,718	0/0:9,0:9:21.54:0,22,456	0/0:25,0:25:66.21:0,66,1459	0/1:14,23:34:99:967,0,110	0/0:18,0:18:36.11:0,36,747	0/0:13,0:13:20.36:0,20,674	0/0:11,0:11:24.07:0,24,548	0/0:25,0:22:53.67:0,54,1079	0/0:7,0:6:9.50:0,10,226	0/0:16,0:16:36.01:0,36,708	0/0:23,0:23:62.88:0,63,1495	0/0:17,0:17:42.13:0,42,959	0/0:32,0:32:81.23:0,81,1845	0/0:20,0:20:51.14:0,51,1122	0/0:15,0:14:38.55:0,39,569	0/0:17,0:17:35.48:0,35,277	0/0:30,0:28:33.04:0,33,511	0/0:8,0:7:21.07:0,21,524	0/0:11,0:11:29.97:0,30,588	0/0:27,0:27:47.89:0,48,1133	0/0:18,0:18:36.12:0,36,825	0/0:10,0:10:27.08:0,27,561	0/0:26,0:26:44.52:0,45,622	0/0:10,0:10:27.09:0,27,615
chr10	48736123	.	G	GTCTGTC	1477.16	PASS	AC=8;AF=0.148;AN=54;BaseQRankSum=0.944;DP=583;FS=4.690;HRun=0;HaplotypeScore=148.6022;InbreedingCoeff=0.8318;MQ=59.31;MQ0=17;MQRankSum=-4.320;QD=17.18;ReadPosRankSum=-2.706;VQSLOD=2.7493;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:31:46.26:0,46,1015	./.	0/0:38,0:10:3.01:0,3,60	0/0:62,0:29:12.47:0,12,172	0/0:16,0:15:30.09:0,30,552	0/0:8,0:8:14.55:0,15,310	0/0:25,0:25:57.17:0,57,1049	0/0:46,0:41:2.04:0,2,284	0/0:15,0:15:27.02:0,27,498	0/0:16,0:16:33.08:0,33,562	0/0:14,0:14:27.06:0,27,481	0/0:25,0:23:39.09:0,39,664	0/0:6,0:6:9.03:0,9,187	0/0:14,0:14:18.04:0,18,335	0/0:22,0:22:57.20:0,57,1185	0/0:16,0:16:36.11:0,36,690	0/0:32,0:32:75.24:0,75,1461	0/0:23,0:23:54.18:0,54,1025	1/1:9,6:15:23:607,23,0	1/1:4,16:20:9.03:202,9,0	1/1:22,3:27:7.69:92,8,0	0/0:7,0:7:21.06:0,21,399	0/0:15,0:15:24.02:0,24,362	0/0:22,0:22:39.11:0,39,772	0/0:17,0:17:36.11:0,36,671	0/0:12,0:12:30.10:0,30,530	1/1:11,10:22:38.77:725,39,0	0/0:10,0:10:18.01:0,18,335
chr10	48736194	.	CT	C	1127.83	PASS	AB=0.878;AC=14;AF=0.250;AN=56;BaseQRankSum=7.156;DP=477;FS=12.775;HRun=14;HaplotypeScore=81.8932;InbreedingCoeff=0.3522;MQ=70.12;MQ0=1;MQRankSum=1.909;QD=5.94;ReadPosRankSum=-0.886;VQSLOD=0.9492;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,2:22:0.73:0,1,260	0/0:3,0:3:6.01:0,6,56	0/1:11,0:6:6.28:10,0,6	0/0:14,0:13:8.14:0,8,60	0/0:31,5:36:10.16:0,10,500	0/0:9,0:11:14.85:0,15,126	0/0:12,0:12:6.32:0,6,189	1/1:9,19:28:53.46:369,53,0	0/0:18,1:19:6.45:0,6,203	0/0:24,1:25:0.44:0,0,147	0/1:6,2:9:23.17:23,0,80	0/0:10,0:17:46.79:0,47,319	0/0:2,0:12:17.20:0,17,96	0/0:9,0:9:9:0,9,80	0/0:20,0:21:38:0,38,354	0/1:17,1:18:8.67:9,0,182	0/1:20,2:23:3.99:4,0,248	0/0:16,1:17:12.44:0,12,254	0/1:9,5:16:7.11:86,0,7	1/1:15,17:34:10.68:327,11,0	1/1:4,6:10:17.48:123,17,0	0/0:7,0:16:30.63:0,31,191	0/0:7,0:17:16.70:0,17,78	0/0:3,0:14:8.52:0,9,43	0/0:15,0:15:30.03:0,30,279	0/1:15,3:18:14.16:14,0,161	1/1:7,14:23:52.25:329,52,0	0/0:6,0:6:15.01:0,15,135
chr10	48736704	.	C	CA	756.94	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=1.920;DP=724;FS=9.703;HRun=6;HaplotypeScore=96.9635;InbreedingCoeff=0.8792;MQ=61.37;MQ0=5;MQRankSum=-0.098;QD=22.26;ReadPosRankSum=-4.365;VQSLOD=1.3028;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:34:93.17:0,93,939	0/0:8,0:8:24.05:0,24,245	0/0:25,0:14:17.11:0,17,206	0/0:29,0:24:5.05:0,5,280	0/0:30,0:30:80.92:0,81,562	0/0:23,0:23:57.24:0,57,590	0/0:23,0:23:57.08:0,57,563	1/1:6,28:32:75.13:852,75,0	0/0:27,0:27:72.16:0,72,734	0/0:31,0:31:77.31:0,77,662	0/0:21,0:21:53.08:0,53,371	0/0:32,0:32:90.20:0,90,915	0/0:18,0:18:48.10:0,48,485	0/0:23,0:23:49.49:0,49,332	0/0:38,0:38:99:0,111,1124	0/0:29,0:29:75.15:0,75,765	0/0:32,0:32:61.99:0,62,418	0/0:19,0:19:42.55:0,43,267	0/0:21,0:21:50.26:0,50,392	0/0:26,0:26:29.53:0,30,409	0/0:30,0:28:59.46:0,59,447	0/0:22,0:22:63.13:0,63,636	0/0:29,0:29:75.10:0,75,740	0/0:29,0:29:75.12:0,75,753	0/0:19,0:19:47.35:0,47,322	0/0:27,0:27:65:0,65,517	0/0:21,0:21:49.50:0,49,315	0/0:21,0:21:52.10:0,52,327
chr10	48736711	.	C	CA	6252.61	PASS	AB=0.591;AC=23;AF=0.411;AN=56;BaseQRankSum=-11.463;DP=729;FS=10.036;HRun=10;HaplotypeScore=74.8537;InbreedingCoeff=0.7584;MQ=64.30;MQ0=4;MQRankSum=0.364;QD=18.89;ReadPosRankSum=0.693;VQSLOD=5.1677;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:32:73.90:0,74,634	0/0:9,0:9:23.96:0,24,197	0/0:23,0:16:10.53:0,11,168	0/0:26,0:20:13.89:0,14,129	1/1:8,22:30:22.93:628,23,0	0/0:23,0:23:53.30:0,53,426	0/0:24,0:26:48.96:0,49,373	0/0:35,0:33:84.53:0,85,492	0/0:28,0:28:74.87:0,75,611	0/1:13,17:32:9.71:468,0,10	1/1:3,20:23:7.76:467,8,0	0/0:31,0:31:71.77:0,72,579	0/0:20,0:20:47.91:0,48,394	1/1:6,17:23:20.58:423,21,0	0/0:38,0:39:97.90:0,98,794	0/0:28,0:28:70.57:0,71,624	0/1:6,21:28:29.59:509,0,30	1/1:4,20:24:48.12:511,48,0	1/1:11,9:21:36.37:352,36,0	1/1:6,19:25:32.50:548,32,0	0/1:10,24:32:2.18:513,0,2	0/0:23,0:23:53.87:0,54,437	0/0:25,0:26:73.91:0,74,589	0/0:24,0:25:64.88:0,65,513	1/1:1,17:20:26.22:453,26,0	1/1:9,19:28:11.21:503,11,0	1/1:4,18:22:42.10:448,42,0	1/1:3,18:21:1.89:431,2,0
chr10	48736902	.	G	GA	3718.73	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-12.008;DP=686;FS=1.692;HRun=9;HaplotypeScore=63.7392;InbreedingCoeff=0.9494;MQ=77.73;MQ0=0;MQRankSum=-0.048;QD=25.82;ReadPosRankSum=-3.595;VQSLOD=2.9375;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,108,934	0/0:10,0:10:17.99:0,18,156	0/0:12,0:12:20.99:0,21,182	0/0:16,0:17:31.79:0,32,254	0/0:34,1:35:65.73:0,66,787	0/0:29,0:29:68.98:0,69,599	0/0:25,0:25:65.98:0,66,573	1/1:12,39:51:94.18:1227,94,0	0/0:29,0:29:80.95:0,81,699	0/0:28,0:28:77.98:0,78,677	0/0:17,0:17:38.97:0,39,339	0/0:41,0:41:99:0,108,937	0/0:13,0:13:29.97:0,30,260	0/0:21,0:21:56.03:0,56,475	0/0:34,0:34:89.94:0,90,773	0/0:31,0:31:83.95:0,84,726	0/0:33,0:32:80.89:0,81,693	0/0:17,0:17:38.94:0,39,332	1/1:5,15:20:22.07:472,22,0	1/1:3,27:30:78.14:837,78,0	1/1:2,14:16:42.11:465,42,0	0/0:14,0:14:32.89:0,33,277	0/0:20,0:21:53:0,53,445	0/0:12,2:15:1.85:0,2,233	0/0:21,0:20:50.95:0,51,440	0/0:27,0:27:71.97:0,72,622	1/1:4,23:27:66.15:719,66,0	0/0:13,0:13:26.99:0,27,234
chr10	48737789	.	C	CT	865.37	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-5.495;DP=586;FS=2.852;HRun=1;HaplotypeScore=85.8268;InbreedingCoeff=0.8934;MQ=80.32;MQ0=0;MQRankSum=-2.694;QD=33.28;ReadPosRankSum=-3.774;VQSLOD=2.4113;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:96.32:0,96,1336	0/0:5,0:5:12.04:0,12,164	0/0:8,0:8:23.97:0,24,266	0/0:23,0:23:52.71:0,53,634	0/0:7,0:7:18.06:0,18,251	0/0:20,0:20:57.18:0,57,778	0/0:31,0:31:93.22:0,93,1241	1/1:2,23:26:66.16:960,66,0	0/0:29,0:29:87.29:0,87,1212	0/0:11,0:11:30.09:0,30,403	0/0:3,0:3:9.02:0,9,108	0/0:34,0:34:93.29:0,93,1270	0/0:12,0:12:33.11:0,33,460	0/0:26,0:26:75.25:0,75,1047	0/0:18,0:18:54.14:0,54,732	0/0:18,0:18:54.18:0,54,750	0/0:30,0:30:87.21:0,87,1188	0/0:34,0:34:96.32:0,96,1340	0/0:19,0:19:57.18:0,57,778	0/0:13,0:13:33.06:0,33,423	0/0:62,0:62:99:0,175,2399	0/0:12,0:12:36.12:0,36,502	0/0:10,0:10:24.08:0,24,335	0/0:48,0:48:99:0,141,1940	0/0:12,0:12:30.09:0,30,404	0/0:27,0:27:78.17:0,78,1027	0/0:10,0:10:30.10:0,30,418	0/0:5,0:5:15.05:0,15,210
chr10	48738830	.	GA	G	548.24	PASS	AC=22;AF=0.917;AN=24;DP=35;FS=0.000;HRun=2;HaplotypeScore=15.3634;InbreedingCoeff=0.0024;MQ=25.91;MQ0=0;QD=24.92;VQSLOD=3.1214;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	./.	./.	1/1:0,3:3:6.02:77,6,0	1/1:0,1:1:3.01:39,3,0	1/1:0,2:2:6.02:77,6,0	./.	./.	1/1:0,1:1:3.01:39,3,0	1/1:0,3:3:6.02:78,6,0	1/1:0,1:1:3.01:39,3,0	./.	1/1:0,4:1:3.01:39,3,0	./.	1/1:0,1:1:3.01:39,3,0	1/1:0,2:2:6.02:77,6,0	./.	./.	./.	./.	./.	0/0:1,1:1:0:0,0,0	1/1:0,3:3:6.02:77,6,0	1/1:0,1:1:3.01:39,3,0	./.
chr10	48738875	.	TG	T	1720.34	PASS	AC=38;AF=0.950;AN=40;DP=108;FS=0.000;HRun=2;HaplotypeScore=16.5879;InbreedingCoeff=0.0309;MQ=35.17;MQ0=3;QD=17.38;VQSLOD=3.4956;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,8:8:21.07:264,21,0	./.	./.	0/0:4,0:1:0:0,0,0	1/1:0,5:3:3.01:39,3,0	./.	1/1:0,6:6:15.05:187,15,0	./.	1/1:0,7:3:6.02:78,6,0	./.	1/1:0,1:1:3.01:35,3,0	1/1:0,8:4:12.04:155,12,0	1/1:0,4:3:9.03:117,9,0	1/1:0,3:3:6.02:78,6,0	1/1:0,5:4:3.01:39,3,0	1/1:0,8:2:6.02:78,6,0	1/1:0,3:3:3.01:39,3,0	1/1:0,6:3:6.02:78,6,0	1/1:0,5:4:12.04:156,12,0	1/1:0,7:4:3.01:39,3,0	1/1:1,8:7:9.03:106,9,0	1/1:0,2:2:6.02:78,6,0	./.	1/1:3,2:5:9.03:114,9,0	1/1:0,3:1:3.01:39,3,0	1/1:0,4:3:6.02:78,6,0	./.	./.
chr10	48739827	.	AC	A	8280.27	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=17.952;DP=558;FS=1.843;HRun=1;HaplotypeScore=83.3108;InbreedingCoeff=0.9919;MQ=86.72;MQ0=0;MQRankSum=-12.342;QD=37.98;ReadPosRankSum=-0.754;VQSLOD=4.9572;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:93.32:0,93,1478	0/0:5,0:5:15.05:0,15,239	0/0:20,0:20:60.20:0,60,930	0/0:22,0:22:63.21:0,63,981	1/1:3,22:25:63.20:861,63,0	0/0:30,0:30:90.20:0,90,1358	0/0:20,0:20:60.20:0,60,959	0/0:26,0:26:75.24:0,75,1175	0/0:30,0:30:90.31:0,90,1436	1/1:0,23:22:66.22:922,66,0	1/1:0,5:4:12.04:167,12,0	0/0:23,0:23:69.24:0,69,1102	0/0:22,0:22:63.20:0,63,979	1/1:0,23:23:60.20:836,60,0	0/0:26,0:26:78.27:0,78,1244	0/0:30,0:30:90.29:0,90,1410	1/1:2,16:17:42.14:583,42,0	1/1:0,14:14:39.13:545,39,0	1/1:0,20:20:60.19:819,60,0	1/1:0,6:6:18.06:247,18,0	1/1:0,11:11:33.02:435,33,0	0/0:16,0:16:45.09:0,45,689	0/0:10,0:9:27.09:0,27,431	0/0:28,0:28:84.26:0,84,1295	1/1:0,9:9:27.09:376,27,0	1/1:1,24:25:72.24:1005,72,0	1/1:1,27:28:84.21:1149,84,0	1/1:3,8:11:24.08:335,24,0
chr10	48739861	.	GA	G	6286.79	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=14.317;DP=561;FS=1.066;HRun=7;HaplotypeScore=79.2152;InbreedingCoeff=0.9933;MQ=79.52;MQ0=0;MQRankSum=-7.493;QD=24.95;ReadPosRankSum=-1.497;VQSLOD=4.6846;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:84.25:0,84,1042	0/0:7,0:7:18.04:0,18,213	0/0:19,0:19:42.03:0,42,471	0/0:15,0:15:33.05:0,33,387	1/1:2,22:24:63.14:642,63,0	0/0:35,0:35:99:0,99,1232	0/0:23,0:23:63.19:0,63,778	1/1:1,32:33:96.19:966,96,0	0/0:25,0:25:66.20:0,66,817	1/1:2,24:25:69.12:694,69,0	1/1:0,6:5:12.03:122,12,0	0/0:25,0:25:75.24:0,75,943	0/0:27,0:27:72.22:0,72,884	1/1:5,12:17:36.08:367,36,0	0/0:19,0:19:54.17:0,54,668	0/0:30,0:30:87.24:0,87,1057	1/1:5,15:20:45.09:457,45,0	1/1:0,14:14:39.09:397,39,0	1/1:8,11:19:42.08:422,42,0	1/1:1,9:10:27.02:264,27,0	1/1:1,14:15:36.08:367,36,0	0/0:19,0:19:48.15:0,48,604	0/0:13,0:12:30.10:0,30,377	0/0:24,0:24:66.20:0,66,816	1/1:1,9:10:21.05:214,21,0	1/1:1,25:26:69.16:703,69,0	1/1:8,15:23:45.09:458,45,0	1/1:2,7:9:21.05:214,21,0
chr10	48740094	.	C	CTT	497.46	PASS	AB=1.000;AC=15;AF=0.278;AN=54;BaseQRankSum=-0.546;DP=262;FS=7.247;HRun=0;HaplotypeScore=48.9792;InbreedingCoeff=0.5139;MQ=79.30;MQ0=1;MQRankSum=-0.417;QD=8.58;ReadPosRankSum=-3.377;VQSLOD=1.4324;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:75.22:0,75,1137	0/0:5,0:5:15.05:0,15,242	0/0:11,0:10:17.58:0,18,255	0/0:12,0:9:21.12:0,21,219	0/0:4,0:4:0.47:0,0,1	0/0:28,0:28:75.21:0,75,1118	0/0:21,0:21:57.15:0,57,843	1/1:4,9:13:3.59:442,4,0	0/0:16,0:16:48.16:0,48,750	0/0:2,0:2:0.45:0,0,1	./.	0/0:11,0:11:14.40:0,14,149	0/0:3,0:3:6:0,6,70	0/0:7,0:7:6.11:0,6,17	0/0:16,0:16:48.07:0,48,659	0/0:21,0:21:54.18:0,54,852	0/0:4,0:4:0.89:0,1,2	0/1:6,0:6:0.05:15,0,0	1/1:1,0:9:12.49:55,12,0	1/1:3,0:3:5.99:50,6,0	0/1:10,0:10:11.55:19,0,12	0/1:4,0:4:4.50:4,0,63	0/0:1,0:1:2.37:0,2,8	0/0:11,0:11:21.42:0,21,223	0/0:1,0:3:0.88:0,1,2	1/1:2,0:2:3:26,3,0	1/1:6,0:6:2.58:7,3,0	1/1:5,0:5:2.99:23,3,0
chr10	48740311	.	C	CT	6525.58	PASS	AB=0.840;AC=39;AF=0.696;AN=56;BaseQRankSum=-8.163;DP=504;FS=19.682;HRun=11;HaplotypeScore=57.7862;InbreedingCoeff=0.7670;MQ=79.45;MQ0=2;MQRankSum=-1.507;QD=17.54;ReadPosRankSum=-0.891;VQSLOD=3.6935;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:56.72:0,57,492	0/0:8,0:8:20.92:0,21,163	0/1:22,0:18:2.54:3,0,38	0/1:17,1:16:5.61:6,0,132	1/1:4,24:28:62.97:596,63,0	0/0:21,0:23:11.39:0,11,307	0/0:10,0:10:20.90:0,21,162	1/1:11,24:35:57.09:563,57,0	0/0:16,0:18:46.81:0,47,347	1/1:5,14:19:19.70:365,20,0	1/1:0,13:14:38.70:361,39,0	1/1:1,9:10:18.04:182,18,0	1/1:3,11:14:15.76:318,16,0	1/1:6,12:18:24:230,24,0	0/0:16,1:18:19.39:0,19,322	0/0:23,0:23:44.78:0,45,347	1/1:4,13:17:48.05:469,48,0	1/1:4,16:20:5.17:356,5,0	1/1:5,7:14:26.75:222,27,0	1/1:6,16:24:36.90:496,37,0	1/1:1,6:9:23.72:211,24,0	1/1:1,10:11:24.05:244,24,0	1/1:0,17:17:32.96:335,33,0	0/1:3,8:12:22.59:143,0,23	1/1:3,13:17:20.05:331,20,0	1/1:1,12:13:36.02:349,36,0	1/1:8,15:23:48.09:486,48,0	1/1:4,11:15:26.97:260,27,0
chr10	48741064	.	C	CA	8757.34	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-8.811;DP=449;FS=4.889;HRun=1;HaplotypeScore=46.8877;InbreedingCoeff=0.9987;MQ=73.30;MQ0=0;MQRankSum=-3.815;QD=39.27;ReadPosRankSum=0.332;VQSLOD=5.0939;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:87.26:0,87,1112	0/0:9,0:9:27.09:0,27,350	0/0:12,0:11:26.66:0,27,293	0/0:17,0:16:44.90:0,45,488	1/1:1,19:20:48.16:719,48,0	0/0:19,0:19:57.16:0,57,723	0/0:15,0:15:42.14:0,42,545	1/1:1,13:14:39.10:509,39,0	0/0:20,0:20:60.19:0,60,778	1/1:0,22:22:66.20:949,66,0	1/1:1,12:13:39.09:552,39,0	0/0:13,0:13:39.13:0,39,506	0/0:11,0:11:33.11:0,33,428	1/1:1,10:11:27.09:403,27,0	0/0:20,0:20:54.16:0,54,686	0/0:20,0:20:60.18:0,60,763	1/1:1,22:23:48.16:720,48,0	1/1:0,9:9:24.08:353,24,0	1/1:0,13:12:36.12:540,36,0	1/1:0,18:18:53.92:776,54,0	1/1:0,23:23:66.22:989,66,0	0/0:14,0:14:39.13:0,39,506	0/0:12,0:12:30.10:0,30,390	0/0:15,0:15:45.15:0,45,583	1/1:1,11:12:27.09:405,27,0	1/1:0,13:13:39.13:584,39,0	1/1:0,22:22:60.20:899,60,0	1/1:0,10:10:24.08:360,24,0
chr10	48741482	.	TA	T	372.17	PASS	AB=1.000;AC=9;AF=0.321;AN=28;BaseQRankSum=3.809;DP=135;FS=2.055;HRun=11;HaplotypeScore=33.9316;InbreedingCoeff=0.7367;MQ=100.71;MQ0=3;MQRankSum=1.625;QD=8.66;ReadPosRankSum=0.568;VQSLOD=1.2597;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:14:39.10:0,39,416	0/0:5,0:5:9.02:0,9,95	0/1:18,0:13:11.54:12,0,44	0/0:16,0:10:15.84:0,16,73	./.	0/0:14,0:14:30.05:0,30,305	0/0:6,0:6:18:0,18,173	./.	0/0:4,0:4:12.03:0,12,128	./.	./.	1/1:0,6:6:11.99:99,12,0	1/1:0,6:6:14.98:123,15,0	./.	0/0:9,0:9:27.07:0,27,288	0/0:14,0:14:36.05:0,36,372	0/0:1,0:1:2.88:0,3,15	./.	./.	./.	./.	./.	1/1:0,8:8:20.96:169,21,0	1/1:0,5:5:11.99:98,12,0	./.	./.	./.	./.
chr10	48741512	.	A	AAGGT	13008.36	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-0.874;DP=366;FS=0.457;HRun=0;HaplotypeScore=77.2481;InbreedingCoeff=0.9817;MQ=87.31;MQ0=0;MQRankSum=-13.727;QD=65.37;ReadPosRankSum=-0.328;VQSLOD=6.1295;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:72.25:0,72,1394	0/0:4,0:4:12.04:0,12,240	0/0:24,0:23:66.22:0,66,1259	0/0:14,0:13:23.98:0,24,395	1/1:0,11:14:39.13:948,39,0	0/0:13,0:13:39.13:0,39,779	0/0:12,0:12:36.12:0,36,692	1/1:3,16:20:54.15:1261,54,0	0/0:6,0:6:18.05:0,18,324	1/1:0,17:18:54.17:1413,54,0	1/1:1,19:21:60.20:1547,60,0	0/0:10,0:10:27.09:0,27,539	0/0:9,0:9:24.08:0,24,479	1/1:5,10:15:40.29:1065,40,0	0/0:12,0:12:36.12:0,36,700	0/0:17,0:17:48.16:0,48,952	1/1:0,8:8:18.06:502,18,0	1/1:1,5:6:12.04:335,12,0	1/1:5,9:16:45.13:1003,45,0	1/1:0,13:14:39.13:1087,39,0	1/1:1,5:9:15.05:380,15,0	0/0:8,0:8:24.07:0,24,415	0/0:7,0:7:21.05:0,21,354	0/0:7,0:7:18.06:0,18,359	1/1:1,4:5:15.05:392,15,0	1/1:2,11:13:30.41:838,30,0	1/1:3,22:27:63.22:1675,63,0	1/1:0,7:13:21.07:563,21,0
chr10	48741898	.	CT	C	5218.42	PASS	AB=0.734;AC=27;AF=0.482;AN=56;BaseQRankSum=10.474;DP=576;FS=2.985;HRun=11;HaplotypeScore=60.6894;InbreedingCoeff=0.7831;MQ=62.69;MQ0=3;MQRankSum=0.351;QD=16.46;ReadPosRankSum=2.388;VQSLOD=5.8760;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:68,3:71:99:0,156,1838	0/0:10,0:10:24.06:0,24,256	0/1:7,0:6:2.51:3,0,55	0/0:11,0:9:0.78:0,1,85	1/1:4,16:20:30.06:329,30,0	0/0:20,0:20:51.11:0,51,527	0/0:14,0:14:32.88:0,33,322	1/1:6,24:29:71.91:591,72,0	0/0:11,0:12:20.92:0,21,206	1/1:2,20:22:53.90:443,54,0	1/1:1,21:22:56.91:466,57,0	0/0:17,0:17:45.11:0,45,480	0/0:16,0:16:39.09:0,39,411	1/1:4,13:16:35.93:295,36,0	0/0:17,0:18:35.25:0,35,410	0/0:15,0:14:29.98:0,30,282	1/1:7,24:31:70.77:559,71,0	1/1:3,32:34:57.31:574,57,0	0/1:3,19:21:10.04:337,0,10	1/1:5,12:18:24.28:281,24,0	1/1:4,16:20:41.93:344,42,0	0/0:9,0:9:24.04:0,24,243	0/0:20,0:20:56.73:0,57,585	0/0:25,0:25:63.15:0,63,667	1/1:1,12:13:23.97:197,24,0	1/1:3,20:23:53.92:443,54,0	1/1:3,20:25:26.88:302,27,0	0/1:4,6:12:42.79:56,0,43
chr10	48742679	.	CTT	C	2894.95	PASS	AB=0.644;AC=26;AF=0.464;AN=56;BaseQRankSum=0.179;DP=562;FS=5.708;HRun=15;HaplotypeScore=64.7448;InbreedingCoeff=0.8115;MQ=61.28;MQ0=16;MQRankSum=2.914;QD=9.98;ReadPosRankSum=3.291;VQSLOD=2.0874;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:31:65.89:0,66,765	0/0:10,0:10:15:0,15,154	0/0:45,0:11:29.17:0,29,235	0/0:37,0:14:19.65:0,20,117	1/1:9,17:23:35.69:310,36,0	0/0:13,1:17:41.52:0,42,455	0/0:11,0:11:22.59:0,23,255	0/1:17,11:30:13.03:244,0,13	0/0:8,0:11:20.54:0,21,232	1/1:11,10:21:26.75:237,27,0	1/1:4,9:15:5.34:126,5,0	0/0:4,0:14:9:0,9,92	0/0:7,0:12:18.04:0,18,205	1/1:5,7:12:23.53:181,24,0	0/0:17,0:19:28.81:0,29,254	0/0:15,0:16:33.05:0,33,372	1/1:7,22:31:32.11:339,32,0	0/1:4,9:12:13.74:183,0,14	1/1:9,18:26:56.57:465,57,0	1/1:7,7:15:11.45:89,11,0	1/1:8,12:19:14.90:132,15,0	0/0:13,0:13:23.22:0,23,222	0/0:7,0:7:12.03:0,12,133	0/0:9,0:23:26.34:0,26,254	1/1:3,8:11:8.99:79,9,0	1/1:7,13:23:26.16:290,26,0	1/1:5,12:17:26.66:214,27,0	1/1:4,21:24:19.31:226,19,0
chr10	48743716	.	T	TC	11839.38	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=17.437;DP=763;FS=6.767;HRun=4;HaplotypeScore=102.3204;InbreedingCoeff=0.9996;MQ=78.39;MQ0=1;MQRankSum=-3.181;QD=32.17;ReadPosRankSum=1.411;VQSLOD=4.8075;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:65,0:65:99:0,177,1980	0/0:9,0:9:24.04:0,24,260	0/0:26,0:26:57.15:0,57,635	0/0:27,0:27:71.78:0,72,777	1/1:5,27:32:60.07:759,60,0	0/0:26,0:26:75.21:0,75,851	0/0:31,0:31:93.25:0,93,1044	1/1:6,22:27:65.77:757,66,0	0/0:26,0:26:75.21:0,75,849	1/1:0,26:25:75.22:966,75,0	1/1:1,22:23:63.21:848,63,0	0/0:23,0:23:66.17:0,66,738	0/0:16,0:16:48.12:0,48,534	1/1:4,21:25:60.20:802,60,0	0/0:40,0:41:99:0,122,1358	0/0:35,0:35:99:0,102,1149	1/1:3,30:33:78.20:1028,78,0	1/1:1,22:23:60.20:802,60,0	1/1:8,32:40:98.92:1220,99,0	1/1:0,21:21:60.20:800,60,0	1/1:5,33:38:78.26:1050,78,0	0/0:17,0:17:51.12:0,51,566	0/0:19,0:19:57.16:0,57,644	0/0:34,0:34:87.20:0,87,972	1/1:2,14:16:30.10:404,30,0	1/1:1,25:26:75.04:954,75,0	1/1:0,26:26:78.26:1047,78,0	1/1:1,10:11:30.10:402,30,0
chr10	48743720	.	CG	C	3738.08	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=20.506;DP=756;FS=6.089;HRun=1;HaplotypeScore=128.0787;InbreedingCoeff=0.9994;MQ=76.52;MQ0=1;MQRankSum=-2.718;QD=10.50;ReadPosRankSum=2.940;VQSLOD=1.8998;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:66,0:66:99:0,195,2896	0/0:9,0:9:27.06:0,27,392	0/0:24,0:24:62.35:0,62,960	0/0:28,0:28:80.19:0,80,1186	1/1:27,1:28:48.73:226,49,0	0/0:28,0:28:81.22:0,81,1215	0/0:33,0:33:99:0,99,1493	1/1:24,1:24:41.66:365,42,0	0/0:25,0:25:75.26:0,75,1164	1/1:26,0:25:62.01:352,62,0	1/1:24,0:24:54.50:213,54,0	0/0:24,0:24:72.20:0,72,1086	0/0:16,0:16:48.15:0,48,727	1/1:24,1:25:36.67:244,37,0	0/0:45,0:45:99:0,124,1952	0/0:35,0:35:99:0,105,1614	1/1:31,1:32:49.88:272,50,0	1/1:22,1:23:52.69:261,53,0	1/1:36,3:39:48.68:503,49,0	1/1:21,0:21:49.86:193,50,0	1/1:32,0:32:69.47:284,69,0	0/0:17,0:17:51.17:0,51,795	0/0:19,0:19:57.19:0,57,874	0/0:31,0:31:93.27:0,93,1416	1/1:15,0:15:24.89:93,25,0	1/1:27,0:27:67.78:379,68,0	1/1:26,0:26:64.38:251,64,0	1/1:13,0:13:26.07:101,26,0
chr10	48744055	.	CA	C	4105.11	PASS	AB=0.613;AC=24;AF=0.429;AN=56;BaseQRankSum=5.587;DP=444;FS=1.956;HRun=9;HaplotypeScore=47.9676;InbreedingCoeff=0.7631;MQ=55.42;MQ0=33;MQRankSum=1.318;QD=17.03;ReadPosRankSum=1.834;VQSLOD=3.6059;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:39:90.16:0,90,990	0/0:9,0:8:24.07:0,24,277	0/0:3,0:2:2.80:0,3,13	0/0:7,0:2:2.90:0,3,16	1/1:6,26:33:65.06:581,65,0	0/0:23,0:21:54.16:0,54,623	0/0:11,0:11:27.07:0,27,301	0/0:25,0:23:55.55:0,56,583	0/0:10,0:10:21.05:0,21,234	0/1:7,14:18:21.18:336,0,21	1/1:3,14:16:30.01:275,30,0	0/0:13,0:12:27.07:0,27,308	0/0:12,0:11:18:0,18,183	1/1:4,7:10:15:137,15,0	0/0:7,0:7:12.04:0,12,138	0/0:15,0:14:27:0,27,293	1/1:9,24:29:31.84:542,32,0	1/1:6,10:15:6.19:174,6,0	1/1:4,16:16:44.98:404,45,0	1/1:4,5:8:9:82,9,0	1/1:2,8:10:24.01:220,24,0	0/0:8,0:7:12.04:0,12,139	0/0:8,0:8:18.05:0,18,207	0/0:10,0:7:9.03:0,9,104	0/1:4,6:9:19.58:95,0,20	1/1:6,21:25:60.02:545,60,0	1/1:3,19:19:54.03:494,54,0	1/1:4,8:8:24.01:220,24,0
chr10	48744516	.	CT	C	4150.30	PASS	AB=0.614;AC=25;AF=0.446;AN=56;BaseQRankSum=0.408;DP=592;FS=5.849;HRun=12;HaplotypeScore=67.1917;InbreedingCoeff=0.7725;MQ=61.33;MQ0=22;MQRankSum=1.576;QD=13.43;ReadPosRankSum=0.570;VQSLOD=3.9358;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,1:33:40.14:0,40,555	0/0:8,0:8:24.05:0,24,244	0/0:24,0:12:11.29:0,11,76	0/0:18,0:13:15.10:0,15,122	1/1:5,20:26:44.38:409,44,0	0/0:19,2:21:4.62:0,5,409	0/0:30,0:31:58.84:0,59,618	1/1:18,15:33:14.28:286,14,0	0/0:18,0:18:39.08:0,39,395	1/1:8,22:28:35.25:455,35,0	0/1:7,10:16:31.02:156,0,31	0/0:8,0:23:23.04:0,23,132	0/0:3,0:7:17.68:0,18,103	0/1:7,14:20:25.02:196,0,25	0/0:19,0:18:44.66:0,45,424	0/0:26,0:26:44.70:0,45,574	1/1:3,22:25:44.98:446,45,0	1/1:6,14:19:35.80:278,36,0	0/1:10,17:26:4.13:338,0,4	1/1:4,7:11:19.95:145,20,0	1/1:5,15:19:30.13:331,30,0	0/0:4,0:15:34.54:0,35,199	0/0:5,0:13:27.31:0,27,143	0/0:9,0:16:25.86:0,26,151	1/1:3,17:20:38.84:302,39,0	1/1:3,13:18:39.92:290,40,0	1/1:10,16:26:22.05:333,22,0	1/1:4,9:13:23.90:186,24,0
chr10	48745453	.	G	GCTGT	3497.89	PASS	AB=0.608;AC=24;AF=0.429;AN=56;BaseQRankSum=-1.913;DP=569;FS=0.533;HRun=0;HaplotypeScore=107.7042;InbreedingCoeff=0.7291;MQ=59.07;MQ0=20;MQRankSum=-2.605;QD=14.45;ReadPosRankSum=-0.831;VQSLOD=3.0181;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:35:75.26:0,75,1356	0/0:7,0:6:15.05:0,15,238	0/0:40,0:21:44.90:0,45,649	0/0:52,0:32:72.03:0,72,1202	1/1:16,0:16:6.02:141,6,0	0/0:12,0:11:27.09:0,27,481	0/0:24,0:24:61.49:0,61,1029	0/0:29,0:29:73.88:0,74,628	0/0:18,0:18:35.95:0,36,594	1/1:23,0:22:36.11:773,36,0	1/1:13,0:14:6.01:97,6,0	0/0:16,0:16:3:0,3,25	0/0:7,0:7:6.01:0,6,55	0/1:2,13:16:0:0,0,0	0/0:22,0:22:54.04:0,54,918	0/0:18,0:18:39.13:0,39,695	1/1:5,20:25:21.05:371,21,0	0/1:6,6:14:25.91:223,0,26	1/1:20,0:20:16.38:665,16,0	1/1:11,1:12:7.20:99,7,0	1/1:12,30:43:9.92:220,10,0	0/0:10,0:11:5.74:0,6,41	0/0:8,0:9:14.40:0,14,110	0/0:25,0:26:8.95:0,9,70	1/1:8,0:9:3.01:68,3,0	1/1:20,0:19:39.08:629,39,0	1/1:4,14:19:10.28:189,10,0	1/1:3,1:3:2.98:21,3,0
chr10	48745456	.	GTC	G	1644.59	PASS	AB=0.959;AC=23;AF=0.411;AN=56;BaseQRankSum=2.119;DP=561;FS=0.000;HRun=0;HaplotypeScore=89.3370;InbreedingCoeff=0.2167;MQ=58.58;MQ0=23;MQRankSum=0.702;QD=5.27;ReadPosRankSum=0.185;VQSLOD=2.5243;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:37:67.14:0,67,662	0/0:7,0:6:6.76:0,7,78	0/0:36,0:17:30.60:0,31,273	0/0:49,0:29:44.43:0,44,502	0/1:19,1:17:2.85:47,0,3	0/0:13,0:12:9.86:0,10,204	0/0:22,0:22:39.93:0,40,460	1/1:29,0:28:77.81:656,78,0	0/0:18,0:18:35.88:0,36,400	0/1:24,0:23:64.77:130,0,65	0/1:11,0:11:15.52:16,0,23	1/1:14,0:14:3:27,3,0	1/1:7,0:7:5.84:45,6,0	0/0:15,0:15:0:0,0,0	0/0:22,0:22:19.34:0,19,308	0/0:18,0:17:35.98:0,36,244	0/1:25,0:24:45.45:63,0,45	0/1:16,0:15:45.67:46,0,71	0/1:11,10:20:65.25:169,0,65	0/1:12,0:12:15.56:16,0,19	0/1:46,0:43:52.58:63,0,53	1/1:11,0:11:5.93:44,6,0	1/1:9,1:10:17.97:163,18,0	1/1:26,0:26:8.97:74,9,0	0/0:8,0:8:5.88:0,6,53	1/1:20,0:19:7.21:204,7,0	0/1:20,0:20:29.10:60,0,29	0/0:3,0:2:2.37:0,2,8
chr10	48745458	.	CTCTG	C	1654.10	PASS	AB=1.000;AC=22;AF=0.393;AN=56;BaseQRankSum=0.473;DP=558;FS=4.346;HRun=0;HaplotypeScore=100.4860;InbreedingCoeff=0.1219;MQ=57.53;MQ0=24;MQRankSum=0.568;QD=5.99;ReadPosRankSum=1.163;VQSLOD=2.1638;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:38:80.89:0,81,969	0/0:7,0:6:14.86:0,15,108	0/0:36,0:17:30.60:0,31,273	0/0:48,0:28:44.43:0,44,502	0/1:19,0:16:29.29:33,0,29	0/0:14,0:13:29.73:0,30,364	0/0:23,0:23:61.86:0,62,658	1/1:29,0:28:77.73:656,78,0	0/0:19,0:19:45.02:0,45,621	0/1:22,0:23:99:127,0,183	0/1:10,0:11:15.51:16,0,42	1/1:0,14:14:3.01:59,3,0	1/1:0,1:7:5.76:91,6,0	0/0:15,0:15:0:0,0,0	0/0:22,0:21:6.89:0,7,341	0/1:18,0:17:60.68:61,0,161	0/1:25,0:24:61.48:61,0,87	0/1:16,0:15:16.17:16,0,183	0/1:19,0:18:99:169,0,103	0/1:2,0:11:8.97:9,0,71	0/0:47,0:44:1.56:0,2,191	1/1:1,10:11:5.74:76,6,0	1/1:8,0:8:14.19:150,14,0	1/1:2,24:26:8.99:139,9,0	0/0:2,0:8:6.02:0,6,87	0/1:18,0:17:51.88:158,0,52	0/1:20,0:20:4.07:4,0,109	0/0:4,0:3:4.83:0,5,44
chr10	48745460	.	C	CTCTC	2022.76	PASS	AB=1.000;AC=22;AF=0.393;AN=56;BaseQRankSum=4.499;DP=561;FS=3.306;HRun=0;HaplotypeScore=108.2732;InbreedingCoeff=0.5953;MQ=56.52;MQ0=25;MQRankSum=-2.057;QD=8.64;ReadPosRankSum=0.166;VQSLOD=2.7904;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:75.15:0,75,1176	0/0:6,0:6:15.01:0,15,186	0/0:34,0:15:38.34:0,38,553	0/0:47,0:27:68.46:0,68,1092	0/1:18,0:15:13.89:85,0,14	0/0:13,0:15:26.60:0,27,411	0/0:22,0:23:46.87:0,47,897	0/0:30,0:29:80.29:0,80,1105	0/0:18,0:19:37.74:0,38,537	1/1:18,0:19:18.92:451,19,0	1/1:7,0:10:5.81:62,6,0	0/0:15,0:15:3:0,3,28	0/0:7,0:7:6.01:0,6,59	0/1:16,0:16:0:0,0,0	0/0:22,0:25:51.15:0,51,751	0/0:10,0:15:39.13:0,39,583	1/1:24,0:24:21.04:259,21,0	0/1:16,0:15:79.18:111,0,79	0/1:18,0:17:35.54:320,0,36	1/1:11,0:11:5.75:71,6,0	1/1:44,0:43:14.94:187,15,0	0/0:11,0:11:5.86:0,6,61	0/0:8,0:8:15.61:0,16,198	0/0:27,0:27:9.02:0,9,95	1/1:7,0:8:2.81:44,3,0	1/1:6,10:20:35.33:427,35,0	1/1:19,0:20:14.89:163,15,0	1/1:3,0:3:3.01:33,3,0
chr10	48746002	.	AGAAGGGGAGGGGAAGGGGACGAGGAC	A	324.64	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.422;DP=473;FS=9.102;HRun=0;HaplotypeScore=299.4269;InbreedingCoeff=0.9403;MQ=61.41;MQ0=1;MQRankSum=0.396;QD=24.97;ReadPosRankSum=-1.551;VQSLOD=0.5571;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,105,8548	0/0:3,0:3:9.03:0,9,859	0/0:22,0:20:50.80:0,51,2026	0/0:24,0:16:38.04:0,38,1587	0/0:13,0:13:36.12:0,36,3015	0/0:17,0:17:51.12:0,51,4284	0/0:22,0:22:60.19:0,60,4333	1/1:2,11:13:33.07:419,33,0	0/0:11,0:11:30.09:0,30,2980	0/0:20,0:20:51.08:0,51,4500	0/0:17,0:17:39.13:0,39,3209	0/0:18,0:18:53.92:0,54,3718	0/0:13,0:13:36.12:0,36,3586	0/0:21,0:21:63.17:0,63,6361	0/0:21,0:21:63.21:0,63,4549	0/0:25,0:25:75.24:0,75,6889	0/0:15,0:15:45.15:0,45,4584	0/0:14,0:14:39.13:0,39,4408	0/0:13,0:13:39.10:0,39,2839	0/0:19,0:19:50.99:0,51,4107	0/0:25,0:25:72.24:0,72,6544	0/0:16,0:16:48.15:0,48,3701	0/0:12,0:12:27.09:0,27,2413	0/0:15,0:15:45.14:0,45,3758	0/0:12,0:12:36.08:0,36,3411	0/0:10,0:10:27.05:0,27,2130	0/0:15,0:15:42.06:0,42,2687	0/0:8,0:8:24:0,24,1848
chr10	48746482	.	GTCCCCAGCTCC	G	9378.31	PASS	AB=0.786;AC=28;AF=0.500;AN=56;BaseQRankSum=11.903;DP=295;FS=3.939;HRun=0;HaplotypeScore=117.2644;InbreedingCoeff=0.7522;MQ=40.75;MQ0=19;MQRankSum=-7.848;QD=78.15;ReadPosRankSum=0.699;VQSLOD=4.4991;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:23:57.20:0,57,3050	0/0:6,0:6:18.06:0,18,939	1/1:5,0:1:3:25,3,0	0/0:8,0:1:1.25:0,1,3	1/1:1,15:16:42.14:1406,42,0	0/0:12,0:7:18.04:0,18,749	0/0:11,0:8:24.06:0,24,970	0/1:4,0:3:99:147,0,165	0/0:15,0:12:36.12:0,36,2015	1/1:0,5:5:12.04:435,12,0	1/1:1,6:6:17.65:560,18,0	0/0:14,0:13:39.13:0,39,1992	0/0:7,0:7:21.07:0,21,1160	1/1:0,3:3:9.03:335,9,0	0/0:11,0:11:33.11:0,33,1952	0/0:13,0:11:30.57:0,31,1686	1/1:3,6:9:24.02:662,24,0	0/1:2,6:8:99:320,0,166	1/1:2,2:2:6.02:223,6,0	1/1:2,10:10:30.10:1050,30,0	1/1:0,2:2:3.01:112,3,0	0/0:15,0:14:27.09:0,27,1521	0/0:10,0:9:24.08:0,24,1229	0/0:23,0:19:54.19:0,54,2902	1/1:1,12:12:36.12:1336,36,0	1/1:3,13:15:39.13:1401,39,0	1/1:0,8:8:24.08:871,24,0	1/1:1,7:7:15.05:497,15,0
chr10	48746506	.	C	CA	1269.78	PASS	AB=0.917;AC=26;AF=0.464;AN=56;BaseQRankSum=7.527;DP=416;FS=21.754;HRun=6;HaplotypeScore=163.8106;InbreedingCoeff=0.7233;MQ=40.73;MQ0=31;MQRankSum=-2.181;QD=6.86;ReadPosRankSum=3.558;VQSLOD=-0.1717;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:21:18.12:0,18,159	0/0:4,0:4:6.01:0,6,58	0/0:31,0:2:3:0,3,28	0/0:27,0:6:13.79:0,14,114	1/1:26,1:27:30.22:127,30,0	0/0:13,0:8:7.74:0,8,54	0/0:12,0:9:16.99:0,17,136	1/1:9,5:12:0.71:118,1,0	0/0:15,0:10:19.59:0,20,185	1/1:13,2:15:35.69:197,36,0	1/1:11,4:14:18.80:107,19,0	0/0:14,0:12:17.68:0,18,145	0/0:10,0:8:11.99:0,12,112	1/1:4,0:4:1.82:12,2,0	0/0:12,0:12:25.79:0,26,189	0/0:18,0:15:24.62:0,25,201	0/1:8,2:9:2.20:17,0,2	1/1:8,0:7:4.87:52,5,0	1/1:4,3:6:12.57:126,13,0	1/1:15,3:16:35.34:183,35,0	1/1:5,0:3:8.20:54,8,0	0/0:13,0:12:12.01:0,12,121	0/0:12,0:11:30:0,30,283	0/0:21,0:17:26.34:0,26,237	1/1:20,2:21:31.65:185,32,0	1/1:15,3:17:24.67:196,25,0	0/1:15,0:15:28.68:29,0,29	1/1:7,0:6:14.04:70,14,0
chr10	48746512	.	AC	A	2695.54	PASS	AB=0.985;AC=33;AF=0.589;AN=56;BaseQRankSum=8.592;DP=403;FS=2.455;HRun=1;HaplotypeScore=145.5720;InbreedingCoeff=0.4854;MQ=39.81;MQ0=33;MQRankSum=-4.164;QD=10.45;ReadPosRankSum=3.668;VQSLOD=1.9917;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:22,2:17:56.02:56,0,110	0/0:4,0:4:4.03:0,4,72	0/0:34,0:2:5.94:0,6,40	0/0:31,0:6:13.34:0,13,130	1/1:23,0:23:60.12:410,60,0	0/1:15,0:8:25.19:25,0,57	0/0:13,0:10:2.37:0,2,202	1/1:13,1:12:7.25:79,7,0	0/0:13,0:9:9.45:0,9,198	1/1:14,0:14:38.68:296,39,0	1/1:16,0:15:38.97:239,39,0	0/1:11,0:10:18.72:19,0,131	0/0:9,0:7:12.76:0,13,117	1/1:4,0:3:8.87:57,9,0	0/1:11,0:11:2.85:3,0,114	0/1:16,0:13:27.43:27,0,178	1/1:5,4:8:17.72:122,18,0	1/1:8,0:7:0.43:79,0,0	1/1:9,0:8:12.73:83,13,0	1/1:19,0:18:44.06:314,44,0	1/1:6,0:4:8.85:57,9,0	0/0:11,0:10:3.12:0,3,156	0/0:11,0:11:32.58:0,33,384	0/0:19,0:15:26.63:0,27,297	1/1:16,2:17:47.04:336,47,0	1/1:19,0:15:39.30:278,39,0	1/1:9,5:14:38.30:284,38,0	1/1:8,0:6:17.77:125,18,0
chr10	48746513	.	CA	C	555.92	PASS	AB=0.917;AC=28;AF=0.500;AN=56;BaseQRankSum=7.867;DP=408;FS=2.635;HRun=6;HaplotypeScore=157.5946;InbreedingCoeff=0.7134;MQ=39.57;MQ0=33;MQRankSum=-2.078;QD=2.91;ReadPosRankSum=4.370;VQSLOD=-0.4359;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:17:2.85:0,3,107	0/1:4,1:5:3.02:3,0,45	0/0:34,0:2:5.80:0,6,40	0/0:30,0:6:13.22:0,13,120	1/1:24,0:23:26.45:77,26,0	0/0:15,0:8:6.92:0,7,58	0/0:13,0:10:16.55:0,17,239	1/1:13,1:12:0.13:25,0,0	0/0:12,0:8:14.63:0,15,154	1/1:14,0:14:21.78:66,22,0	1/1:16,1:16:11.38:52,11,0	0/0:12,0:11:19.50:0,19,182	0/0:9,0:7:11.77:0,12,125	1/1:4,0:3:3.27:8,3,0	0/0:10,0:10:15.85:0,16,126	0/0:16,0:13:7.29:0,7,165	1/1:10,0:9:10.75:31,11,0	0/1:8,0:7:8.29:11,0,8	1/1:9,1:9:11.11:65,11,0	1/1:20,0:18:15.20:54,15,0	1/1:6,0:4:3.37:8,3,0	0/0:11,0:10:15.52:0,16,193	0/0:12,0:12:33.04:0,33,369	0/0:19,0:15:24.03:0,24,280	1/1:18,0:17:29.92:114,30,0	1/1:17,2:15:24.37:93,24,0	1/1:14,0:14:25.72:125,26,0	1/1:7,1:6:9.62:26,10,0
chr10	48746516	.	AAACC	A	2606.04	PASS	AB=0.990;AC=34;AF=0.607;AN=56;BaseQRankSum=4.484;DP=411;FS=8.393;HRun=0;HaplotypeScore=163.9323;InbreedingCoeff=0.5880;MQ=41.21;MQ0=31;MQRankSum=-3.098;QD=10.14;ReadPosRankSum=0.418;VQSLOD=2.4640;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:24,1:18:40.95:125,0,41	0/1:5,0:5:2.48:52,0,2	0/0:36,0:3:8.28:0,8,52	0/0:31,0:7:7.12:0,7,153	1/1:25,0:24:41.46:271,41,0	0/0:15,0:8:3.41:0,3,12	0/1:13,0:10:1.15:1,0,133	1/1:14,0:12:16.07:118,16,0	0/0:11,0:7:0.19:0,0,1	1/1:13,1:14:35.14:263,35,0	1/1:13,3:16:33.01:291,33,0	0/0:11,0:10:4.54:0,5,127	0/0:7,0:5:12.03:0,12,132	1/1:5,0:4:8.95:42,9,0	0/1:9,0:9:42.35:42,0,80	1/1:14,0:11:6.64:32,7,0	1/1:11,0:10:18.31:135,18,0	1/1:8,0:7:10.90:62,11,0	1/1:13,0:10:16.43:124,16,0	1/1:18,1:18:25.77:250,26,0	1/1:6,0:4:2.80:7,3,0	0/0:12,0:11:9.50:0,9,158	0/0:13,0:13:12.17:0,12,154	0/0:18,0:14:21.79:0,22,265	1/1:18,0:17:41.37:388,41,0	1/1:19,1:16:37.35:283,37,0	1/1:14,0:14:31.68:216,32,0	1/1:8,0:6:14.12:88,14,0
chr10	48746517	.	AAC	A	2956.66	PASS	AB=0.984;AC=33;AF=0.589;AN=56;BaseQRankSum=6.979;DP=394;FS=1.752;HRun=0;HaplotypeScore=147.4486;InbreedingCoeff=0.4188;MQ=43.42;MQ0=30;MQRankSum=-4.229;QD=11.73;ReadPosRankSum=2.781;VQSLOD=3.7693;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:17:52.50:59,0,53	0/1:5,0:5:24.76:45,0,25	0/0:37,0:4:6.07:0,6,69	0/0:30,0:7:15.97:0,16,208	1/1:24,0:23:55.64:310,56,0	0/0:15,0:8:4.37:0,4,35	0/0:13,0:10:3.88:0,4,153	1/1:8,0:9:19.28:154,19,0	0/0:10,0:6:7.45:0,7,75	1/1:14,0:14:38.63:303,39,0	1/1:14,0:14:40.96:289,41,0	0/1:11,0:10:8.61:9,0,113	0/0:6,0:4:12.01:0,12,111	1/1:5,0:4:11.84:85,12,0	0/1:7,0:8:35.10:35,0,73	0/1:14,0:11:35.89:36,0,86	1/1:9,0:9:19.34:116,19,0	0/1:8,0:7:1.59:78,0,2	1/1:8,2:7:17.37:158,17,0	1/1:18,0:18:39.70:273,40,0	1/1:6,0:4:5.90:37,6,0	0/1:12,0:11:14.25:14,0,119	0/0:13,0:13:17.26:0,17,208	0/0:18,0:14:23.88:0,24,246	1/1:16,1:16:47.54:384,48,0	1/1:17,1:15:37.84:340,38,0	1/1:10,2:14:37.85:302,38,0	1/1:8,0:6:17.51:124,18,0
chr10	48746519	.	CCAA	C	4199.23	PASS	AB=0.930;AC=33;AF=0.589;AN=56;BaseQRankSum=6.208;DP=393;FS=2.411;HRun=0;HaplotypeScore=146.3301;InbreedingCoeff=0.6211;MQ=43.28;MQ0=29;MQRankSum=-4.813;QD=15.73;ReadPosRankSum=0.932;VQSLOD=3.4306;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:16:35.34:35,0,80	0/1:3,2:5:6.45:56,0,6	0/1:38,1:4:4.05:4,0,22	0/0:30,0:7:11.18:0,11,91	1/1:8,15:24:67.81:642,68,0	0/0:15,0:8:8.30:0,8,38	0/0:13,0:10:14.09:0,14,221	1/1:9,1:9:12.70:133,13,0	0/0:10,0:6:14:0,14,74	1/1:7,7:15:38.98:452,39,0	1/1:10,4:14:40.60:360,41,0	0/0:11,0:10:23.36:0,23,199	0/0:7,0:5:12.03:0,12,134	1/1:4,1:4:11.81:80,12,0	0/1:7,0:7:10.15:10,0,105	0/1:14,0:11:11.08:11,0,62	1/1:8,2:9:20.93:213,21,0	1/1:7,1:7:11.94:110,12,0	1/1:7,2:7:15.06:114,15,0	1/1:11,5:17:44.68:457,45,0	1/1:6,0:4:5.92:39,6,0	0/0:12,0:11:19.12:0,19,203	0/0:13,0:13:34.44:0,34,286	0/0:15,0:11:22.88:0,23,298	1/1:7,8:16:47.72:557,48,0	1/1:12,6:15:44.59:412,45,0	1/1:13,0:14:38.62:318,39,0	1/1:5,3:6:17.93:194,18,0
chr10	48746555	.	AG	A	5210.86	PASS	AB=0.779;AC=50;AF=0.962;AN=52;BaseQRankSum=2.004;DP=296;FS=6.071;HRun=2;HaplotypeScore=153.7895;InbreedingCoeff=-0.0457;MQ=74.15;MQ0=2;MQRankSum=-2.573;QD=17.72;ReadPosRankSum=2.263;VQSLOD=4.8661;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,15:13:32.33:221,32,0	1/1:0,7:7:17.89:140,18,0	0/1:16,7:16:30.37:268,0,30	0/1:11,4:9:16.22:134,0,16	1/1:0,17:17:23.85:178,24,0	1/1:0,10:9:26.58:197,27,0	1/1:0,9:9:26.89:211,27,0	1/1:1,9:10:20.99:183,21,0	1/1:0,10:10:26.86:199,27,0	1/1:0,15:15:44.95:378,45,0	1/1:0,13:13:26.82:194,27,0	1/1:0,10:10:26.86:199,27,0	1/1:0,4:4:11.81:78,12,0	1/1:0,6:6:17.90:131,18,0	1/1:0,10:10:25.86:165,26,0	1/1:0,12:12:35.82:267,36,0	1/1:0,5:5:8.95:66,9,0	./.	1/1:2,13:15:35.97:304,36,0	1/1:1,10:11:26.85:198,27,0	./.	1/1:0,12:12:32.87:260,33,0	1/1:1,16:17:44.44:321,44,0	1/1:0,9:9:17.90:132,18,0	1/1:0,16:16:44.53:323,45,0	1/1:0,8:8:23.97:198,24,0	1/1:0,7:7:20.91:159,21,0	1/1:0,5:5:14.84:108,15,0
chr10	48746641	.	GGC	G	10588.76	PASS	AC=54;AF=1.000;AN=54;BaseQRankSum=1.324;DP=311;FS=0.000;HRun=0;HaplotypeScore=222.6276;InbreedingCoeff=0.0647;MQ=31.84;MQ0=0;MQRankSum=-1.690;QD=34.05;ReadPosRankSum=1.281;VQSLOD=4.8689;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,14:13:26.99:379,27,0	1/1:1,6:7:18.06:292,18,0	1/1:1,0:1:2.60:10,3,0	./.	1/1:3,16:19:24.48:355,24,0	1/1:1,20:16:48.05:719,48,0	1/1:1,10:10:27:369,27,0	1/1:0,5:5:15.05:243,15,0	1/1:2,13:13:38.89:513,39,0	1/1:4,12:16:47.22:618,47,0	1/1:3,13:16:21.07:340,21,0	1/1:0,19:19:57.04:835,57,0	1/1:0,9:9:27.04:408,27,0	1/1:2,5:7:20.95:280,21,0	1/1:0,19:19:57.15:895,57,0	1/1:1,12:12:35.86:427,36,0	1/1:1,8:9:23.97:329,24,0	1/1:0,5:5:15.02:216,15,0	1/1:1,10:11:30.10:485,30,0	1/1:0,13:13:39.09:600,39,0	1/1:0,7:7:3.39:49,3,0	1/1:2,11:13:38.96:566,39,0	1/1:3,12:15:21.39:280,21,0	1/1:0,8:8:9.01:146,9,0	1/1:1,14:15:35.29:513,35,0	1/1:5,11:16:20.04:506,20,0	1/1:0,4:3:9.03:146,9,0	1/1:1,1:2:5.98:68,6,0
chr10	48747635	.	T	TAC	10100.12	PASS	AB=0.725;AC=27;AF=0.482;AN=56;BaseQRankSum=11.311;DP=781;FS=0.680;HRun=0;HaplotypeScore=112.5367;InbreedingCoeff=0.8077;MQ=58.77;MQ0=6;MQRankSum=3.100;QD=23.60;ReadPosRankSum=-0.255;VQSLOD=5.4533;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:59:99:0,155,1721	0/0:11,0:11:30.09:0,30,360	0/0:55,0:32:26.17:0,26,314	0/1:54,0:35:10.57:11,0,348	1/1:10,11:22:33.11:499,33,0	0/0:16,0:16:30.08:0,30,350	0/0:21,0:21:19.57:0,20,429	1/1:27,14:42:45.14:697,45,0	0/0:24,0:25:57.01:0,57,661	1/1:12,24:37:12.09:1114,12,0	1/1:2,6:8:15.05:240,15,0	0/0:23,0:23:54.16:0,54,646	0/0:24,0:24:57.17:0,57,681	1/1:5,16:21:39.13:623,39,0	0/0:39,0:39:90.25:0,90,1055	0/0:24,0:24:48.13:0,48,562	1/1:5,26:32:72.25:1151,72,0	0/1:5,18:23:14.69:758,0,15	1/1:9,10:19:36.11:535,36,0	1/1:4,7:12:15.05:240,15,0	1/1:13,54:70:99:1900,120,0	0/0:14,0:15:26.91:0,27,302	0/0:16,0:16:36.11:0,36,431	0/0:25,0:25:57.63:0,58,673	1/1:6,12:18:20.14:410,20,0	1/1:9,20:29:23.80:852,24,0	1/1:5,16:22:39.13:624,39,0	0/1:7,12:19:2.74:447,0,3
chr10	48747928	.	TTTC	T	213.68	PASS	AB=0.961;AC=10;AF=0.192;AN=52;BaseQRankSum=2.716;DP=254;FS=62.728;HRun=0;HaplotypeScore=30.6832;InbreedingCoeff=-0.0015;MQ=51.38;MQ0=16;MQRankSum=2.193;QD=2.32;ReadPosRankSum=-1.235;VQSLOD=-0.3852;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:11,0:11:10.17:10,0,109	0/0:2,0:2:6.02:0,6,75	0/0:40,0:7:10.15:0,10,52	0/1:27,0:6:11.01:11,0,22	0/0:7,0:7:20.03:0,20,139	0/0:6,0:6:15:0,15,172	0/0:9,0:9:11.31:0,11,161	0/0:20,0:18:13.95:0,14,271	0/0:7,0:6:10.13:0,10,92	0/0:9,0:9:10.69:0,11,68	./.	0/0:7,0:7:3.64:0,4,167	0/0:3,0:3:6.02:0,6,91	0/0:7,0:7:14.05:0,14,70	./.	0/0:8,0:8:22.17:0,22,198	0/1:7,6:12:19.66:123,0,20	1/1:4,5:9:15.86:136,16,0	0/1:9,0:6:5.57:6,0,68	0/0:4,0:4:11.60:0,12,77	0/1:4,0:4:8.72:37,0,9	0/1:8,0:8:13.80:14,0,54	0/1:5,0:5:7.73:8,0,67	0/0:7,0:7:9.62:0,10,88	0/0:8,0:8:15.17:0,15,100	0/0:6,0:6:3.74:0,4,67	0/0:7,0:7:7.44:0,7,44	0/1:6,0:6:2.26:2,0,10
chr10	48750025	.	A	ACC	144.12	PASS	AB=0.921;AC=6;AF=0.107;AN=56;BaseQRankSum=3.993;DP=526;FS=51.882;HRun=0;HaplotypeScore=90.6562;InbreedingCoeff=-0.1341;MQ=49.39;MQ0=28;MQRankSum=0.200;QD=1.35;ReadPosRankSum=1.765;VQSLOD=-0.5925;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:41:99:0,102,1379	0/0:5,0:5:15.05:0,15,202	0/0:23,0:6:3.74:0,4,76	0/0:17,0:5:9.89:0,10,47	0/0:27,0:25:18.86:0,19,493	0/0:20,0:18:54.16:0,54,744	0/0:18,0:16:42.08:0,42,529	0/1:27,0:22:35.50:35,0,308	0/0:18,0:18:51.15:0,51,686	0/0:16,0:14:38.28:0,38,459	0/0:19,0:19:25.41:0,25,432	0/0:11,0:11:9.99:0,10,122	0/1:10,1:10:86.54:96,0,87	0/0:14,0:14:38.13:0,38,458	0/0:18,0:17:39.12:0,39,522	0/0:14,0:14:36.10:0,36,478	0/0:21,0:20:30.40:0,30,483	0/1:28,0:28:11.59:12,0,585	0/0:22,0:20:31.24:0,31,502	0/1:7,0:7:15.14:15,0,103	0/0:12,0:12:6.59:0,7,211	0/1:11,1:12:24.93:25,0,284	0/0:11,0:11:24.02:0,24,285	0/1:12,6:19:82.56:83,0,205	0/0:16,0:15:23.35:0,23,328	0/0:21,0:19:41.01:0,41,495	0/0:24,0:24:46.32:0,46,644	0/0:30,0:22:36.75:0,37,660
chr10	48750501	.	A	AT	3746.63	PASS	AB=0.800;AC=26;AF=0.464;AN=56;BaseQRankSum=-7.904;DP=375;FS=1.069;HRun=11;HaplotypeScore=40.2622;InbreedingCoeff=0.8277;MQ=61.45;MQ0=5;MQRankSum=-1.556;QD=19.51;ReadPosRankSum=1.528;VQSLOD=4.4113;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:41.72:0,42,322	0/0:8,0:8:17.92:0,18,139	0/0:6,0:5:3.45:0,3,23	0/1:6,0:3:13.16:14,0,13	1/1:2,9:11:27.01:263,27,0	0/0:11,0:11:20.90:0,21,162	0/0:17,0:19:34.80:0,35,254	0/0:22,0:17:38.80:0,39,297	0/0:6,0:6:14.94:0,15,116	1/1:6,11:17:9.83:281,10,0	1/1:3,5:8:12.46:113,12,0	0/0:10,0:10:20.89:0,21,162	0/0:15,0:15:38.83:0,39,300	0/1:3,6:9:2.66:134,0,3	0/0:8,0:8:17.93:0,18,139	0/0:15,0:15:41.83:0,42,324	1/1:4,29:33:78.15:792,78,0	1/1:2,16:18:39.08:396,39,0	1/1:2,7:8:21.01:203,21,0	1/1:2,7:9:15.03:152,15,0	1/1:1,19:20:39.08:396,39,0	0/0:12,0:13:34.90:0,35,258	0/0:7,0:7:17.93:0,18,139	0/0:21,0:21:47.76:0,48,368	1/1:0,10:10:21.04:213,21,0	1/1:4,11:15:5.32:221,5,0	1/1:0,12:12:30.03:294,30,0	1/1:4,10:14:27.05:273,27,0
chr10	48751219	.	A	AAAAAAAAAAG	7529.71	PASS	AB=0.838;AC=35;AF=0.625;AN=56;BaseQRankSum=-2.607;DP=363;FS=78.543;HRun=0;HaplotypeScore=169.3467;InbreedingCoeff=0.6369;MQ=59.15;MQ0=1;MQRankSum=-6.057;QD=29.64;ReadPosRankSum=-0.261;VQSLOD=1.2648;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:44.27:0,44,732	0/0:3,0:3:8.99:0,9,130	0/1:16,0:14:8.51:9,0,263	0/0:9,0:5:3.01:0,3,84	1/1:5,4:17:26.94:598,27,0	0/0:15,0:15:24.76:0,25,345	0/0:18,0:18:37.96:0,38,563	1/1:16,0:12:20.72:258,21,0	0/0:13,0:13:18.85:0,19,579	1/1:16,2:18:25.89:475,26,0	1/1:2,2:6:5.70:147,6,0	0/1:12,0:12:1.25:519,0,1	0/1:6,0:6:1.61:188,0,2	0/1:3,2:12:1.89:246,0,2	0/0:16,0:16:31.60:0,32,526	0/0:11,0:11:7.81:0,8,415	1/1:14,1:16:29.51:684,30,0	1/1:4,1:9:17.96:344,18,0	1/1:5,5:19:39.05:965,39,0	0/1:5,5:12:0.82:155,0,1	1/1:8,0:8:14.92:192,15,0	1/1:13,0:13:23.58:307,24,0	1/1:7,0:7:11.79:85,12,0	1/1:13,2:15:27.63:590,28,0	1/1:2,6:8:9.03:322,9,0	1/1:21,2:22:24.11:849,24,0	1/1:2,6:12:13.21:454,13,0	1/1:0,5:6:3.01:144,3,0
chr10	48751616	.	C	CA	548	PASS	AB=0.615;AC=9;AF=0.161;AN=56;BaseQRankSum=3.898;DP=326;FS=33.325;HRun=0;HaplotypeScore=43.0636;InbreedingCoeff=0.7514;MQ=71.62;MQ0=2;MQRankSum=0.066;QD=18.90;ReadPosRankSum=-0.952;VQSLOD=2.0209;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:54.14:0,54,716	0/0:2,0:2:6.01:0,6,67	0/0:20,0:15:37.94:0,38,400	0/0:20,0:12:23.62:0,24,234	0/0:10,0:10:23.64:0,24,312	0/0:11,0:11:19.90:0,20,310	0/0:30,0:30:78.17:0,78,976	0/0:16,0:15:35.75:0,36,447	0/0:12,0:12:27.07:0,27,345	0/0:9,0:9:27.08:0,27,337	0/0:6,0:6:12.03:0,12,150	0/1:3,5:8:1.99:182,0,2	1/1:2,4:4:6.02:84,6,0	0/0:8,0:8:20.97:0,21,233	0/0:11,0:11:30.10:0,30,417	0/0:6,0:6:18.05:0,18,236	0/0:16,0:16:39.02:0,39,483	0/0:12,0:12:36.09:0,36,453	0/0:15,0:14:42.08:0,42,498	0/0:6,0:5:8.82:0,9,109	0/0:32,0:32:80.44:0,80,994	1/1:0,0:1:2.99:23,3,0	1/1:0,3:3:6.02:86,6,0	1/1:8,3:11:30.02:315,30,0	0/0:3,0:3:9.03:0,9,126	0/0:6,0:6:15.05:0,15,208	0/0:11,0:11:27.06:0,27,374	0/0:15,0:15:42.07:0,42,523
chr10	48751709	.	ACG	A	972.82	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=8.398;DP=350;FS=0.775;HRun=0;HaplotypeScore=45.9459;InbreedingCoeff=0.8958;MQ=67.67;MQ0=10;MQRankSum=-7.767;QD=36.03;ReadPosRankSum=1.193;VQSLOD=5.2047;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:25:75.24:0,75,1486	0/0:7,0:7:21.07:0,21,426	0/0:15,0:14:39.13:0,39,771	0/0:9,0:8:24.08:0,24,477	0/0:9,0:9:27.09:0,27,531	0/0:15,0:15:42.14:0,42,852	0/0:21,0:20:63.22:0,63,1261	0/0:27,0:24:69.24:0,69,1340	0/0:7,0:5:11.91:0,12,242	0/0:10,0:10:27.09:0,27,548	0/0:4,0:4:9.03:0,9,183	1/1:0,9:9:27.09:407,27,0	1/1:2,5:8:21.07:295,21,0	0/0:11,0:10:30.10:0,30,608	0/0:9,0:9:27.09:0,27,548	0/0:6,0:5:15.05:0,15,305	0/0:32,0:31:93.28:0,93,1819	0/0:17,0:16:48.16:0,48,955	0/0:18,0:18:54.16:0,54,1018	0/0:6,0:5:15.05:0,15,289	0/0:28,0:28:81.26:0,81,1588	1/1:0,3:3:9.03:134,9,0	1/1:0,4:4:12.04:175,12,0	1/1:0,2:3:9.03:126,9,0	0/0:12,0:11:33.11:0,33,637	0/0:15,0:15:45.15:0,45,879	0/0:18,0:18:54.19:0,54,1085	0/0:1,0:1:3.01:0,3,61
chr10	48751713	.	TAG	T	846.19	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=8.273;DP=344;FS=0.000;HRun=0;HaplotypeScore=46.0076;InbreedingCoeff=0.9376;MQ=68.96;MQ0=0;MQRankSum=-7.437;QD=32.55;ReadPosRankSum=1.333;VQSLOD=5.1480;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:78.25:0,78,1449	0/0:7,0:7:21.07:0,21,406	0/0:13,0:14:39.13:0,39,734	0/0:8,0:8:21.07:0,21,406	0/0:8,0:8:24.08:0,24,464	0/0:15,0:15:45.15:0,45,869	0/0:22,0:21:66.23:0,66,1275	0/0:27,0:26:72.24:0,72,1342	0/0:3,0:3:9.03:0,9,174	0/0:11,0:11:33.11:0,33,608	0/0:6,0:6:15.05:0,15,281	1/1:0,9:9:24.08:336,24,0	1/1:1,6:7:21.06:272,21,0	0/0:11,0:11:33.11:0,33,637	0/0:11,0:11:33.11:0,33,637	0/0:7,0:7:21.07:0,21,406	0/0:30,0:30:90.31:0,90,1706	0/0:15,0:15:45.13:0,45,832	0/0:18,0:18:54.19:0,54,1042	0/0:6,0:6:18.06:0,18,339	0/0:25,0:25:72.25:0,72,1381	1/1:0,3:3:9.03:125,9,0	1/1:0,4:4:12.04:164,12,0	1/1:1,2:3:9.03:114,9,0	0/0:11,0:11:33.10:0,33,605	0/0:14,0:14:42.14:0,42,811	0/0:18,0:18:54.19:0,54,1043	0/0:5,0:5:15.05:0,15,290
chr10	48751783	.	C	CG	828.24	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-6.251;DP=321;FS=10.256;HRun=3;HaplotypeScore=45.5961;InbreedingCoeff=0.5724;MQ=71.15;MQ0=4;MQRankSum=0.577;QD=29.58;ReadPosRankSum=-4.193;VQSLOD=0.9244;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:45.13:0,45,529	0/0:6,0:6:15.04:0,15,170	0/0:24,0:13:4.35:0,4,73	0/0:26,0:12:20.50:0,21,209	0/0:10,0:10:24.07:0,24,287	0/0:18,0:18:45.14:0,45,539	0/0:15,0:15:42.03:0,42,433	1/1:3,25:28:75.12:923,75,0	0/0:6,0:6:18.05:0,18,204	0/0:6,0:6:15.05:0,15,180	0/0:6,0:6:18.06:0,18,216	0/0:4,0:4:3.01:0,3,36	0/0:7,0:7:21.06:0,21,251	0/0:10,0:10:21.05:0,21,241	0/0:8,0:8:21.06:0,21,252	0/0:4,0:4:9.03:0,9,108	0/0:25,0:25:60.13:0,60,689	0/0:11,0:11:26.99:0,27,279	0/0:15,0:15:36.09:0,36,413	0/0:5,0:5:12.03:0,12,134	0/0:14,0:14:36.11:0,36,431	0/0:3,0:3:5.98:0,6,55	0/0:2,0:2:6.02:0,6,72	0/0:5,0:5:15.05:0,15,179	0/0:7,0:7:20.73:0,21,226	0/0:15,0:15:42.13:0,42,503	0/0:10,0:10:27.01:0,27,303	0/0:13,0:13:36.11:0,36,431
chr10	48752549	.	AGCGGTC	A	13888.16	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=14.024;DP=569;FS=1.045;HRun=0;HaplotypeScore=132.3005;InbreedingCoeff=0.9954;MQ=83.73;MQ0=0;MQRankSum=-16.004;QD=53.42;ReadPosRankSum=0.320;VQSLOD=4.9304;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,148,5172	0/0:6,0:6:18.05:0,18,566	0/0:27,0:27:81.28:0,81,2680	0/0:14,0:14:39.13:0,39,1401	1/1:1,26:27:60.12:1121,60,0	0/0:21,0:21:60.21:0,60,2152	0/0:16,0:16:45.14:0,45,1536	0/0:20,0:20:60.21:0,60,2110	0/0:22,0:22:60.21:0,60,2153	1/1:2,19:21:54.19:1278,54,0	1/1:0,19:19:51.17:1158,51,0	0/0:17,0:17:48.12:0,48,1639	0/0:20,0:20:57.20:0,57,2015	1/1:2,23:25:66.23:1536,66,0	0/0:27,0:27:81.26:0,81,2730	0/0:23,0:23:69.22:0,69,2388	1/1:3,14:17:33.07:741,33,0	1/1:1,16:17:42.14:1009,42,0	1/1:3,19:22:60.20:1396,60,0	1/1:1,16:17:48.08:998,48,0	1/1:2,9:11:15.01:240,15,0	0/0:13,0:13:33.11:0,33,1185	0/0:10,0:10:30.10:0,30,1043	0/0:22,0:22:63.22:0,63,2251	1/1:1,17:18:39.13:850,39,0	1/1:1,24:25:72.23:1608,72,0	1/1:2,27:29:66.23:1520,66,0	1/1:3,9:12:18.06:433,18,0
chr10	48753124	.	A	AC	480.05	PASS	AC=2;AF=0.037;AN=54;BaseQRankSum=2.316;DP=441;FS=36.106;HRun=0;HaplotypeScore=56.5718;InbreedingCoeff=0.5163;MQ=45.37;MQ0=61;MQRankSum=1.798;QD=12.00;ReadPosRankSum=-1.642;VQSLOD=1.7579;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:11:21.45:0,21,124	0/0:6,0:4:12.01:0,12,108	0/0:54,0:8:17.27:0,17,122	0/0:54,0:17:8.20:0,8,123	0/0:13,0:11:29.78:0,30,231	0/0:11,0:9:23.86:0,24,193	0/0:11,0:5:11.92:0,12,89	1/1:10,29:36:75.22:574,75,0	0/0:6,0:6:14.97:0,15,135	0/0:9,0:6:17.95:0,18,155	0/0:8,0:8:17.92:0,18,146	0/0:8,0:6:14.80:0,15,130	0/0:7,0:5:15.01:0,15,148	0/0:4,0:4:3:0,3,29	0/0:6,0:5:8.99:0,9,95	0/0:10,0:9:20.88:0,21,170	0/0:28,0:23:35.89:0,36,310	0/0:12,0:7:11.17:0,11,111	0/0:26,0:18:53.81:0,54,438	0/0:13,0:11:29.88:0,30,245	0/0:3,0:1:2.97:0,3,20	./.	0/0:6,0:4:5.97:0,6,46	0/0:13,0:8:11.14:0,11,72	0/0:14,0:10:27.43:0,27,238	0/0:15,0:12:32.94:0,33,286	0/0:10,0:9:8.98:0,9,83	0/0:34,0:20:50.71:0,51,400
chr10	48753134	.	AAAAC	A	1223.69	PASS	AB=0.994;AC=17;AF=0.315;AN=54;BaseQRankSum=-0.729;DP=433;FS=7.126;HRun=0;HaplotypeScore=65.3613;InbreedingCoeff=0.1465;MQ=50.18;MQ0=57;MQRankSum=3.042;QD=5.91;ReadPosRankSum=3.202;VQSLOD=0.7719;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:10:21.46:0,21,318	0/0:6,0:4:12.04:0,12,239	0/0:55,0:8:7.65:0,8,77	0/0:58,0:20:29.50:0,29,350	0/1:14,0:12:5.50:65,0,6	0/0:12,0:10:0.31:0,0,209	0/0:10,0:5:11.94:0,12,123	0/1:42,0:38:99:320,0,143	0/0:6,0:6:15.02:0,15,200	1/1:9,0:6:0.54:90,1,0	1/1:5,1:6:2.75:75,3,0	0/0:8,0:6:13.43:0,13,139	0/1:7,0:5:10.95:11,0,153	0/0:4,0:4:2.37:0,2,8	0/0:6,0:5:9.03:0,9,161	0/0:13,0:12:29.92:0,30,329	0/1:28,0:23:30.14:94,0,30	1/1:11,1:8:3.19:110,3,0	0/1:27,0:19:95.24:134,0,95	0/1:12,0:10:18.07:37,0,18	0/0:1,1:1:0:0,0,0	./.	0/0:6,0:5:8.97:0,9,82	0/0:11,0:7:12.87:0,13,141	1/1:12,1:9:6.34:157,6,0	1/1:13,0:11:3.17:141,3,0	0/0:10,0:9:5.39:0,5,37	0/1:23,1:11:27.89:141,0,28
chr10	48753135	.	AAAC	A	1614.62	PASS	AB=0.931;AC=20;AF=0.370;AN=54;BaseQRankSum=-1.066;DP=424;FS=5.158;HRun=0;HaplotypeScore=58.4712;InbreedingCoeff=0.4455;MQ=50.56;MQ0=56;MQRankSum=2.926;QD=7.84;ReadPosRankSum=3.877;VQSLOD=1.2590;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:10:18.52:0,19,225	0/0:7,0:5:14.72:0,15,201	0/0:55,0:8:1.35:0,1,59	0/0:58,0:20:16.49:0,16,296	0/1:11,1:10:0.06:101,0,0	0/0:11,0:9:15.99:0,16,178	0/0:10,0:5:10.24:0,10,83	0/1:41,0:37:18:366,0,18	0/0:6,0:6:14.53:0,15,138	1/1:3,5:5:14.88:127,15,0	1/1:6,0:6:10.01:75,10,0	0/0:8,0:6:10.96:0,11,92	0/0:7,0:5:0.93:0,1,123	1/1:1,3:4:2.22:7,2,0	0/0:6,0:5:8.92:0,9,122	0/0:12,0:12:28.81:0,29,254	0/1:24,2:22:11.43:154,0,11	1/1:12,0:8:2.78:106,3,0	0/1:25,0:17:5.37:162,0,5	1/1:12,0:10:15.33:114,15,0	0/0:2,0:1:0:0,0,0	./.	0/0:6,0:5:8.94:0,9,71	0/0:10,0:7:9.46:0,9,99	1/1:12,1:9:21.07:216,21,0	1/1:13,0:11:19.22:195,19,0	0/1:9,1:9:0:9,0,0	0/1:19,5:11:13.49:153,0,13
chr10	48753136	.	AAC	A	1861.37	PASS	AB=1.000;AC=27;AF=0.519;AN=52;BaseQRankSum=-1.151;DP=418;FS=2.128;HRun=0;HaplotypeScore=53.2519;InbreedingCoeff=0.7133;MQ=50.94;MQ0=56;MQRankSum=1.741;QD=8.78;ReadPosRankSum=2.121;VQSLOD=3.0815;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:9:18.20:0,18,146	0/0:7,0:5:14.66:0,15,152	0/0:55,0:8:1.22:0,1,52	0/0:58,0:20:16.37:0,16,251	1/1:11,1:10:6.02:111,6,0	0/0:11,0:9:22.12:0,22,148	0/1:10,0:5:0.43:0,0,45	1/1:41,0:37:55.24:506,55,0	0/0:6,0:6:9.64:0,10,77	1/1:8,0:5:14.88:114,15,0	1/1:6,0:6:11.69:87,12,0	0/0:8,0:6:5.75:0,6,62	0/0:7,0:5:7.51:0,8,105	1/1:4,0:4:2.50:9,2,0	0/0:6,0:5:6.02:0,6,81	0/0:13,0:12:21.20:0,21,185	1/1:7,18:21:1.82:151,2,0	1/1:13,0:9:13:126,13,0	1/1:24,0:16:31.51:267,32,0	1/1:11,0:9:17.70:128,18,0	./.	./.	0/0:5,0:4:8.64:0,9,52	0/0:10,0:7:9.34:0,9,76	1/1:12,1:9:26.64:200,27,0	1/1:13,0:11:19.94:196,20,0	1/1:9,0:8:5.38:42,5,0	1/1:23,0:10:0.35:111,0,0
chr10	48753137	.	AC	A	1923.77	PASS	AC=24;AF=0.480;AN=50;BaseQRankSum=-1.744;DP=411;FS=8.894;HRun=4;HaplotypeScore=48.6228;InbreedingCoeff=0.7942;MQ=51.31;MQ0=56;MQRankSum=0.600;QD=9.82;ReadPosRankSum=1.619;VQSLOD=0.1407;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:7:9.46:0,9,62	0/0:7,0:5:14.53:0,15,115	0/0:55,0:8:1.12:0,1,52	0/0:58,0:20:16.12:0,16,200	1/1:12,0:10:16.15:113,16,0	0/0:10,0:8:17.39:0,17,113	0/0:10,0:5:8.86:0,9,58	1/1:42,0:38:92.82:660,93,0	0/0:5,0:5:8.38:0,8,56	1/1:8,0:5:14.84:108,15,0	1/1:6,0:6:11.82:82,12,0	0/0:8,0:6:8.84:0,9,65	0/0:7,0:5:11.86:0,12,94	./.	0/0:6,0:5:6:0,6,56	0/0:12,0:11:15.09:0,15,153	1/1:25,0:21:17.75:118,18,0	1/1:11,0:8:20.77:145,21,0	1/1:23,0:15:32.30:277,32,0	1/1:11,0:9:17.90:147,18,0	./.	./.	0/0:5,0:4:5.86:0,6,39	0/0:10,0:7:9.29:0,9,63	1/1:13,0:9:23.78:168,24,0	1/1:13,0:11:20:197,20,0	1/1:3,6:8:2.99:24,3,0	1/1:23,0:10:0.15:78,0,0
chr10	48753361	.	CAG	C	900.03	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.458;DP=430;FS=9.317;HRun=0;HaplotypeScore=50.7738;InbreedingCoeff=0.7598;MQ=90.37;MQ0=0;MQRankSum=-1.804;QD=39.13;ReadPosRankSum=-4.235;VQSLOD=3.3348;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:87.28:0,87,1598	0/0:3,0:3:9.03:0,9,169	0/0:20,0:20:24.74:0,25,859	0/0:16,0:16:23.59:0,24,712	0/0:7,0:7:21.06:0,21,348	0/0:15,0:15:45.15:0,45,834	0/0:8,0:8:24.08:0,24,440	1/1:0,23:23:69.22:995,69,0	0/0:19,0:19:54.19:0,54,1011	0/0:7,0:7:21.07:0,21,390	0/0:10,0:10:30.10:0,30,562	0/0:15,0:15:42.14:0,42,780	0/0:7,0:7:21.07:0,21,393	0/0:12,0:12:33.11:0,33,618	0/0:17,0:17:51.17:0,51,955	0/0:12,0:12:36.12:0,36,674	0/0:29,0:29:83.82:0,84,1571	0/0:27,0:27:78.27:0,78,1443	0/0:26,0:26:78.26:0,78,1426	0/0:12,0:12:33.11:0,33,599	0/0:30,0:30:90.31:0,90,1686	0/0:2,0:2:3.01:0,3,56	0/0:11,0:11:30.08:0,30,499	0/0:11,0:11:33.11:0,33,618	0/0:16,0:16:48.16:0,48,899	0/0:14,0:14:39.13:0,39,731	0/0:27,0:27:81.26:0,81,1462	0/0:3,0:3:9.03:0,9,168
chr10	48754512	.	A	AATGACTTCCTGTCTTGACCT	1427.36	PASS	AB=0.683;AC=18;AF=0.900;AN=20;BaseQRankSum=-1.759;DP=32;FS=10.447;HRun=0;HaplotypeScore=26.6911;InbreedingCoeff=-0.2575;MQ=152.79;MQ0=4;MQRankSum=-1.658;QD=59.47;ReadPosRankSum=-1.055;VQSLOD=0.4242;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,0:2:5.99:48,6,0	1/1:1,0:1:3.01:60,3,0	0/1:2,0:4:34.35:401,0,34	0/1:4,1:7:10.41:761,0,10	1/1:1,0:1:2.98:21,3,0	./.	./.	./.	./.	1/1:1,0:1:3:25,3,0	./.	./.	./.	1/1:1,0:1:2.97:20,3,0	1/1:2,0:2:5.96:45,6,0	./.	./.	./.	./.	./.	./.	./.	./.	1/1:1,0:1:3:25,3,0	./.	1/1:2,0:2:6.02:105,6,0	./.	./.
chr10	48755271	.	C	CCT	2675.58	PASS	AB=0.786;AC=24;AF=0.429;AN=56;BaseQRankSum=-3.829;DP=288;FS=11.568;HRun=0;HaplotypeScore=55.7119;InbreedingCoeff=0.7452;MQ=75.09;MQ0=14;MQRankSum=-1.473;QD=24.32;ReadPosRankSum=-1.257;VQSLOD=2.7086;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:9.03:0,9,127	0/0:5,0:5:15.04:0,15,180	0/0:24,0:14:24.89:0,25,408	0/0:41,0:20:22.29:0,22,499	1/1:1,6:7:0.47:1,0,0	0/0:14,0:13:18.05:0,18,220	0/0:11,0:11:21.07:0,21,306	1/1:3,14:16:44.11:725,44,0	0/0:7,0:6:9.03:0,9,113	1/1:1,8:9:18.06:293,18,0	1/1:1,3:4:3.01:38,3,0	0/0:9,0:9:18.06:0,18,251	0/0:6,0:6:10.54:0,11,114	1/1:4,0:4:8.94:105,9,0	0/0:11,0:11:21.01:0,21,263	0/0:6,0:6:15.05:0,15,203	1/1:1,18:19:27.86:384,28,0	0/1:1,3:4:0.23:116,0,0	1/1:3,6:9:22.92:324,23,0	1/1:4,5:9:5.91:40,6,0	1/1:10,0:10:24.03:356,24,0	0/0:12,0:11:9.03:0,9,125	0/0:5,0:5:12:0,12,138	0/0:14,0:14:20.98:0,21,272	1/1:5,0:5:9.03:140,9,0	0/1:8,0:6:8.31:185,0,8	1/1:5,0:5:12.04:168,12,0	0/0:3,0:2:3.01:0,3,32
chr10	48757595	.	GGTC	G	2285.59	PASS	AB=0.983;AC=30;AF=0.536;AN=56;BaseQRankSum=-5.052;DP=513;FS=19.412;HRun=0;HaplotypeScore=104.1191;InbreedingCoeff=-0.4539;MQ=54.99;MQ0=12;MQRankSum=-4.421;QD=5.10;ReadPosRankSum=-2.582;VQSLOD=0.6282;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:41,2:43:99:237,0,182	0/0:4,0:4:5.75:0,6,32	0/0:30,0:8:9.73:0,10,186	0/0:31,0:10:7.30:0,7,110	0/1:21,0:14:16.33:69,0,16	0/1:15,0:15:87.84:88,0,114	0/1:17,0:16:41.28:41,0,166	0/1:17,0:11:50.38:50,0,81	0/1:7,1:9:18.49:33,0,18	1/1:20,0:16:4.30:125,4,0	0/1:16,1:14:64.18:97,0,64	0/1:11,0:11:37.85:38,0,54	0/1:10,0:9:2.89:111,0,3	0/1:14,1:15:31.02:130,0,31	0/1:24,0:24:99:109,0,186	0/1:13,0:13:6.99:7,0,122	0/1:39,0:37:93.34:237,0,93	1/1:23,0:23:6.80:141,7,0	1/1:7,0:7:3.37:101,3,0	0/1:22,1:20:21.15:157,0,21	1/1:6,2:8:11.81:52,12,0	0/1:12,0:10:2.92:3,0,48	0/1:26,1:23:99:127,0,125	0/1:16,0:16:36.32:125,0,36	0/1:14,0:10:18.80:56,0,19	1/1:19,1:18:23.95:247,24,0	0/1:20,0:20:47.23:47,0,55	0/1:7,0:5:11.01:16,0,11
chr10	48759626	.	G	GTGTT	16727.90	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-14.731;DP=644;FS=0.699;HRun=0;HaplotypeScore=96.2651;InbreedingCoeff=0.9980;MQ=72.56;MQ0=1;MQRankSum=-4.666;QD=49.93;ReadPosRankSum=2.656;VQSLOD=5.7179;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,108,1807	0/0:7,0:7:21.07:0,21,360	0/0:31,0:30:53.55:0,54,851	0/0:25,0:23:54.17:0,54,861	1/1:5,18:24:57.11:1324,57,0	0/0:23,0:23:60.16:0,60,973	0/0:20,0:20:57.18:0,57,950	1/1:14,17:31:60.20:1434,60,0	0/0:17,0:17:45.14:0,45,741	1/1:4,16:20:48.16:1201,48,0	1/1:3,15:18:42.14:1021,42,0	0/0:25,0:25:66.23:0,66,1132	0/0:25,0:25:69.20:0,69,1118	1/1:6,12:18:39.09:926,39,0	0/0:27,0:27:69.21:0,69,1143	0/0:13,0:13:27.08:0,27,438	1/1:8,24:31:60.21:1510,60,0	1/1:6,16:22:39.13:923,39,0	1/1:15,18:35:63.18:1446,63,0	1/1:5,10:15:33.11:801,33,0	1/1:5,13:19:42.14:1017,42,0	0/0:20,0:20:51.13:0,51,844	0/0:11,0:11:27.08:0,27,436	0/0:22,0:22:63.22:0,63,1080	1/1:7,19:26:36.59:907,37,0	1/1:7,21:29:66.23:1631,66,0	1/1:10,28:37:87.26:2135,87,0	1/1:2,6:8:18.06:453,18,0
chr10	48760100	.	C	CT	861.61	PASS	AB=0.926;AC=11;AF=0.196;AN=56;BaseQRankSum=-1.374;DP=545;FS=6.166;HRun=3;HaplotypeScore=100.4192;InbreedingCoeff=0.5615;MQ=67.07;MQ0=1;MQRankSum=1.040;QD=8.79;ReadPosRankSum=0.463;VQSLOD=0.8295;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,108,1277	0/0:7,0:7:21.06:0,21,252	0/0:39,0:23:35.46:0,35,452	0/0:28,0:17:34.85:0,35,355	0/0:32,0:32:46.03:0,46,121	0/0:17,0:17:51.16:0,51,609	0/0:27,0:27:81.23:0,81,955	0/0:24,0:24:22.27:0,22,58	0/0:19,0:19:54.15:0,54,633	0/0:19,0:19:10.22:0,10,40	0/1:18,0:18:3.20:3,0,26	0/1:5,2:7:11.19:95,0,11	1/1:2,11:13:6.31:212,6,0	0/0:14,0:14:15.55:0,16,41	0/0:18,0:18:54.15:0,54,637	0/0:17,0:17:51.16:0,51,610	0/0:23,0:23:28.25:0,28,74	0/1:14,0:14:0.67:1,0,32	0/0:16,0:15:17.17:0,17,45	0/0:28,0:28:30.63:0,31,81	0/0:7,0:7:9.33:0,9,25	1/1:3,12:16:5.63:286,6,0	1/1:4,16:21:7.56:281,8,0	1/1:5,4:9:2.22:121,2,0	0/0:11,0:11:13.99:0,14,37	0/0:27,0:27:7.20:0,7,55	0/0:23,0:23:23.52:0,24,62	0/0:13,0:13:14.53:0,15,38
chr10	48760102	.	TTC	T	3002.37	PASS	AB=1.000;AC=33;AF=0.589;AN=56;BaseQRankSum=12.078;DP=549;FS=1.569;HRun=0;HaplotypeScore=98.1604;InbreedingCoeff=0.6858;MQ=65.31;MQ0=1;MQRankSum=-0.307;QD=8.91;ReadPosRankSum=0.585;VQSLOD=3.4426;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,114,1735	0/0:7,0:7:21.07:0,21,336	0/0:36,0:21:49.77:0,50,622	0/0:30,0:18:3.93:0,4,347	1/1:32,0:32:83.32:357,83,0	0/0:17,0:17:51.11:0,51,739	0/0:28,0:28:84.22:0,84,1231	1/1:24,0:24:61.32:363,61,0	0/0:19,0:19:57.17:0,57,868	1/1:18,1:19:45.60:211,46,0	1/1:17,0:17:25.96:203,26,0	0/1:7,0:7:0.48:0,0,22	0/1:13,0:13:9.58:11,0,10	1/1:15,0:15:26.78:113,27,0	0/0:18,0:18:54.17:0,54,871	0/0:17,0:17:51.14:0,51,775	1/1:23,0:23:51.10:221,51,0	1/1:14,0:14:17.49:133,17,0	1/1:17,1:17:41.87:217,42,0	1/1:27,1:28:72.04:398,72,0	1/1:7,0:7:16.07:67,16,0	0/1:16,0:16:10.65:34,0,11	0/1:21,0:21:9.19:36,0,9	0/1:8,0:8:4.18:41,0,4	1/1:12,0:12:27.07:122,27,0	1/1:26,1:27:65.67:366,66,0	1/1:23,0:23:39.92:168,40,0	1/1:12,1:13:30.68:150,31,0
chr10	48760103	.	TC	T	9953.03	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=8.725;DP=549;FS=2.032;HRun=1;HaplotypeScore=65.8982;InbreedingCoeff=0.9731;MQ=66.06;MQ0=1;MQRankSum=-1.516;QD=29.53;ReadPosRankSum=-0.320;VQSLOD=4.4605;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,114,1409	0/0:7,0:7:21.07:0,21,272	0/0:37,0:21:43.86:0,44,519	0/0:30,0:18:4.62:0,5,280	1/1:0,32:32:93.27:1271,93,0	0/0:17,0:17:51.10:0,51,607	0/0:28,0:28:84.21:0,84,1024	1/1:7,17:24:65.96:790,66,0	0/0:19,0:19:57.17:0,57,717	1/1:1,18:19:54.12:692,54,0	1/1:1,16:17:46.46:469,46,0	1/1:9,0:9:15.52:134,16,0	1/1:14,0:14:20.49:141,20,0	1/1:0,14:14:30.10:418,30,0	0/0:18,0:18:54.16:0,54,695	0/0:17,0:17:51.14:0,51,633	1/1:1,22:23:57.15:769,57,0	1/1:4,10:14:38.32:468,38,0	1/1:6,11:16:45.96:552,46,0	1/1:1,27:28:83.99:969,84,0	1/1:0,7:7:18.06:250,18,0	1/1:16,0:16:36.22:234,36,0	1/1:19,1:20:35.03:229,35,0	1/1:9,0:9:20.99:150,21,0	1/1:0,12:12:30.06:396,30,0	1/1:9,18:27:76.07:942,76,0	1/1:0,22:22:44.96:624,45,0	1/1:2,11:13:35.89:455,36,0
chr10	48760714	.	ATGTGTG	A	1406.33	PASS	AB=0.808;AC=10;AF=0.179;AN=56;BaseQRankSum=2.630;DP=696;FS=0.738;HRun=0;HaplotypeScore=165.8208;InbreedingCoeff=0.5884;MQ=63.15;MQ0=7;MQRankSum=-7.115;QD=10.82;ReadPosRankSum=1.780;VQSLOD=2.5356;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:42:54.18:0,54,1547	0/1:9,1:10:49.26:49,0,231	0/0:27,0:14:2.04:0,2,6	0/0:40,0:22:3.01:0,3,43	0/0:15,0:27:22.60:0,23,342	0/0:17,0:17:27.08:0,27,768	0/0:19,0:20:33.11:0,33,982	0/0:20,0:20:21.95:0,22,296	0/0:23,0:24:39.12:0,39,1038	0/0:18,0:19:33.11:0,33,829	0/0:20,0:25:23.44:0,23,417	1/1:10,12:23:21.07:410,21,0	1/1:21,7:31:17.66:384,18,0	0/0:27,0:26:30.10:0,30,717	0/0:19,0:26:17.90:0,18,460	0/0:37,0:38:75.24:0,75,2128	0/0:12,0:30:13.60:0,14,276	0/0:14,0:13:24.06:0,24,498	0/0:17,0:15:9.03:0,9,199	0/0:20,0:20:6.49:0,6,173	0/0:39,0:37:37.47:0,37,773	1/1:10,13:23:24.01:448,24,0	1/1:9,5:14:0.46:1,0,0	0/1:17,11:29:76.36:264,0,76	0/0:12,0:23:18.06:0,18,447	0/0:18,0:28:52.73:0,53,1304	0/0:20,0:29:35.98:0,36,691	0/0:9,0:13:10.59:0,11,216
chr10	48760732	.	G	GTGTGTG	3946.42	PASS	AB=1.000;AC=30;AF=0.556;AN=54;BaseQRankSum=-5.105;DP=697;FS=0.000;HRun=0;HaplotypeScore=156.0798;InbreedingCoeff=0.7984;MQ=51.55;MQ0=17;MQRankSum=-0.549;QD=10.44;ReadPosRankSum=-5.287;VQSLOD=0.7359;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:45:39.11:0,39,711	0/0:6,0:6:9.03:0,9,163	1/1:31,0:8:0.47:2,0,0	./.	1/1:24,0:24:12.04:319,12,0	0/0:14,0:14:23.86:0,24,403	0/0:22,0:22:27.09:0,27,526	0/1:24,0:24:1.70:2,0,2	0/0:24,0:24:22.66:0,23,464	1/1:17,5:23:27.94:493,28,0	1/1:23,0:23:6.47:121,6,0	0/0:26,0:26:21.07:0,21,286	0/0:27,0:27:22.69:0,23,273	1/1:24,0:23:27.09:567,27,0	0/0:24,0:24:5.31:0,5,10	0/0:36,0:36:33.38:0,33,1027	1/1:32,0:32:9.92:175,10,0	1/1:13,0:13:14.96:161,15,0	1/1:19,0:15:4.37:74,4,0	1/1:17,0:17:3.48:44,3,0	1/1:45,0:42:21.98:336,22,0	0/0:25,0:25:20.87:0,21,276	0/1:16,0:15:0.01:0,0,0	0/0:30,0:30:14.76:0,15,199	1/1:26,0:25:15.52:416,16,0	1/1:24,0:23:30.10:665,30,0	1/1:25,0:25:16.41:437,16,0	1/1:11,0:11:5.87:135,6,0
chr10	48761157	.	T	TC	723.88	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-5.350;DP=673;FS=0.000;HRun=7;HaplotypeScore=67.5452;InbreedingCoeff=0.9966;MQ=82.04;MQ0=1;MQRankSum=-0.925;QD=24.96;ReadPosRankSum=-3.409;VQSLOD=2.6580;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,135,1276	0/0:9,0:9:27.04:0,27,261	0/0:32,0:31:73.80:0,74,748	0/0:26,0:26:48.39:0,48,561	0/0:22,0:22:60.05:0,60,571	0/0:25,0:25:66.08:0,66,629	0/0:18,0:18:41.76:0,42,400	1/1:6,23:29:69.19:819,69,0	0/0:23,0:23:66.11:0,66,637	0/0:27,0:27:75.12:0,75,724	0/0:15,0:15:36.05:0,36,348	0/0:23,0:23:63.07:0,63,597	0/0:28,0:28:78.12:0,78,748	0/0:25,0:25:69.06:0,69,656	0/0:32,0:32:81.11:0,81,778	0/0:23,0:23:60.06:0,60,569	0/0:22,0:22:66.11:0,66,637	0/0:21,0:21:48.05:0,48,456	0/0:22,0:22:51.08:0,51,492	0/0:28,0:28:69.10:0,69,662	0/0:22,0:22:50.94:0,51,478	0/0:15,0:15:45.02:0,45,425	0/0:29,0:28:65.52:0,66,598	0/0:23,0:23:60.09:0,60,579	0/0:16,0:16:36.69:0,37,324	0/0:29,0:29:63.04:0,63,604	0/0:24,0:24:66.08:0,66,631	0/0:11,0:11:24.04:0,24,232
chr10	48761549	.	T	TC	1691.94	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-5.700;DP=585;FS=9.951;HRun=8;HaplotypeScore=59.0635;InbreedingCoeff=0.9943;MQ=62.99;MQ0=5;MQRankSum=2.947;QD=22.86;ReadPosRankSum=1.656;VQSLOD=3.8192;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:45.02:0,45,412	0/0:9,0:9:24.01:0,24,220	0/0:14,0:8:21.01:0,21,192	0/0:14,0:11:18:0,18,163	0/0:31,0:31:87.01:0,87,789	0/0:23,0:22:60.02:0,60,544	0/0:30,0:30:74.99:0,75,673	0/0:41,0:41:77.99:0,78,708	0/0:25,0:25:60.01:0,60,548	0/0:20,0:20:54.03:0,54,493	0/0:16,0:16:42.02:0,42,384	1/1:2,13:15:39.12:449,39,0	1/1:3,12:15:36.11:415,36,0	0/0:19,0:19:45.02:0,45,412	0/0:28,0:28:62.98:0,63,570	0/0:20,0:20:45:0,45,407	0/0:34,0:33:87.02:0,87,791	0/0:18,0:17:38.95:0,39,343	0/0:21,0:19:42:0,42,384	0/0:30,0:30:74.73:0,75,671	0/0:17,0:17:32.97:0,33,293	1/1:1,15:16:39.11:448,39,0	1/1:2,12:14:26.95:311,27,0	1/1:3,11:14:21.06:242,21,0	0/0:20,0:20:57.03:0,57,522	0/0:23,0:23:54.01:0,54,492	0/0:25,0:25:57.02:0,57,521	0/0:7,0:7:20.95:0,21,180
chr10	48762091	.	T	TA	3817.27	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-10.117;DP=466;FS=7.256;HRun=9;HaplotypeScore=45.3046;InbreedingCoeff=0.9508;MQ=67.96;MQ0=1;MQRankSum=1.318;QD=24.31;ReadPosRankSum=1.164;VQSLOD=4.3021;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:74.81:0,75,646	0/0:5,0:5:12:0,12,104	0/0:9,0:8:12.81:0,13,114	0/0:5,0:4:8.99:0,9,76	1/1:7,21:28:14.03:585,14,0	0/0:22,0:22:50.96:0,51,442	0/0:14,0:14:35.96:0,36,308	0/0:29,0:29:74.97:0,75,651	0/0:10,0:10:23.98:0,24,204	1/1:1,14:15:42.11:464,42,0	1/1:2,11:13:33.09:365,33,0	0/0:12,0:13:26.03:0,26,214	0/0:9,0:9:23.99:0,24,208	1/1:1,9:10:24.06:265,24,0	0/0:14,0:14:41.99:0,42,365	0/0:16,0:16:32.97:0,33,286	1/1:3,17:20:25.08:505,25,0	1/1:5,11:16:12.12:281,12,0	0/0:25,0:24:59.97:0,60,518	0/0:24,0:24:65.99:0,66,573	0/0:26,0:26:74.94:0,75,643	0/0:12,0:12:29.99:0,30,260	0/0:12,0:12:32.98:0,33,286	0/0:10,0:10:29.99:0,30,260	1/1:5,10:15:4.91:274,5,0	1/1:5,28:33:61.11:879,61,0	0/0:26,0:26:33.38:0,33,442	1/1:0,7:7:18.05:199,18,0
chr10	48763189	.	TTGTG	T	12434.66	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=7.322;DP=1066;FS=0.293;HRun=0;HaplotypeScore=208.3756;InbreedingCoeff=0.9953;MQ=58.59;MQ0=11;MQRankSum=1.185;QD=26.57;ReadPosRankSum=3.797;VQSLOD=4.6899;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:46:96.05:0,96,2212	0/0:16,0:17:41.63:0,42,780	0/0:40,0:26:24.51:0,25,395	0/0:31,0:15:12.02:0,12,148	1/1:18,22:40:69.22:1109,69,0	0/0:23,0:25:47.63:0,48,1029	0/0:39,0:39:77.69:0,78,1610	0/0:44,0:40:30.98:0,31,362	0/0:44,0:49:99:0,102,2226	1/1:34,17:51:84.27:1315,84,0	1/1:13,15:28:54.03:788,54,0	0/0:39,0:42:99:0,108,2311	0/0:42,0:41:81.25:0,81,1884	1/1:15,20:36:66.18:1024,66,0	0/0:58,1:61:99:0,104,3044	0/0:46,0:47:99:0,105,2230	1/1:10,15:26:48.56:730,49,0	1/1:12,17:29:37.87:930,38,0	1/1:20,10:27:36.05:586,36,0	1/1:21,16:37:58.16:988,58,0	1/1:36,34:70:99:1436,102,0	0/0:45,0:45:90.28:0,90,2045	0/0:26,0:26:44.87:0,45,968	0/0:38,0:39:50.76:0,51,1163	1/1:14,12:26:42.06:629,42,0	1/1:16,21:36:80.12:1218,80,0	1/1:10,25:36:61.85:1239,62,0	1/1:3,19:22:27.09:442,27,0
chr10	48763213	.	GTGTA	G	6561.57	PASS	AB=0.988;AC=22;AF=0.393;AN=56;BaseQRankSum=15.689;DP=1077;FS=5.444;HRun=0;HaplotypeScore=234.7374;InbreedingCoeff=0.5265;MQ=51.68;MQ0=16;MQRankSum=-0.050;QD=13.10;ReadPosRankSum=4.126;VQSLOD=3.8380;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:56:99:0,132,2718	0/0:16,0:16:44.73:0,45,846	0/0:38,0:16:38.14:0,38,463	0/0:42,0:18:39.42:0,39,461	1/1:41,1:42:6.56:500,7,0	0/0:26,0:26:69.12:0,69,1327	0/0:42,0:39:99:0,102,1891	0/1:43,0:37:8.66:448,0,9	0/0:51,0:51:99:0,133,2647	0/1:49,0:49:99:673,0,128	0/1:27,1:28:49.38:389,0,49	0/0:55,0:55:99:0,104,2420	0/0:35,0:34:82.44:0,82,1984	1/1:35,1:36:51.77:682,52,0	0/0:60,0:59:99:0,116,3098	0/0:46,0:45:99:0,117,2545	1/1:29,0:29:9.91:344,10,0	1/1:29,0:29:59.17:504,59,0	0/1:25,1:21:99:309,0,110	1/1:30,0:30:57.45:492,57,0	1/1:65,0:64:5.77:582,6,0	0/0:43,0:43:89.57:0,90,2161	0/0:23,0:23:54.10:0,54,1157	0/0:42,0:42:50.46:0,50,1245	1/1:17,0:17:37.73:330,38,0	0/1:47,0:46:99:480,0,110	1/1:38,1:36:11.36:622,11,0	0/1:21,0:21:7.98:208,0,8
chr10	48763215	.	GTA	G	553.50	PASS	AB=0.979;AC=5;AF=0.089;AN=56;BaseQRankSum=1.757;DP=1082;FS=26.802;HRun=0;HaplotypeScore=229.5220;InbreedingCoeff=0.3530;MQ=51.41;MQ0=17;MQRankSum=-0.766;QD=3.57;ReadPosRankSum=-3.857;VQSLOD=0.7247;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:56:99:0,124,2022	0/0:17,0:17:21.29:0,21,555	0/0:39,0:16:25.11:0,25,365	0/0:43,0:16:43.14:0,43,425	0/0:42,0:42:61.31:0,61,258	0/0:29,0:29:54.41:0,54,925	0/0:43,1:41:87.79:0,88,1416	1/1:43,0:37:77.37:601,77,0	0/0:52,0:52:71.32:0,71,1875	0/1:48,0:48:32.95:33,0,371	0/1:26,1:27:7.77:8,0,193	0/0:56,1:57:32.83:0,33,1591	0/0:34,1:34:41.31:0,41,1393	0/1:36,1:37:32.07:32,0,81	0/0:59,0:58:99:0,120,2183	0/0:46,0:45:95.01:0,95,1826	0/0:28,0:28:38.18:0,38,155	0/0:28,0:28:34.39:0,34,135	0/0:27,0:23:24.97:0,25,239	0/0:30,0:30:42.86:0,43,177	0/0:63,0:62:37.44:0,37,288	0/0:42,1:43:49.43:0,49,1479	0/0:25,0:25:44.28:0,44,790	0/0:41,0:41:50.60:0,51,880	0/0:17,0:17:24.91:0,25,120	0/0:46,0:45:68.92:0,69,454	0/0:38,0:35:20.97:0,21,231	0/0:21,0:21:25.81:0,26,109
chr10	48763278	.	A	AGTGTGTGTAT	19031.76	PASS	AB=0.516;AC=27;AF=0.500;AN=54;BaseQRankSum=-6.557;DP=1075;FS=2.036;HRun=0;HaplotypeScore=293.8272;InbreedingCoeff=0.8388;MQ=49.35;MQ0=10;MQRankSum=-10.780;QD=40.15;ReadPosRankSum=-2.920;VQSLOD=3.9514;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:56:99:0,144,3954	0/0:13,0:13:36.10:0,36,1001	0/0:34,0:12:9.38:0,9,475	0/0:49,0:29:42.21:0,42,1118	0/1:2,27:33:0.14:0,0,1	0/0:31,0:29:61.56:0,62,1959	0/0:47,0:47:99:0,105,2966	1/1:45,0:34:48.78:1368,49,0	0/0:54,0:54:99:0,144,4258	1/1:9,43:64:99:5255,129,0	1/1:14,6:20:23.58:532,24,0	1/1:3,34:48:22.39:1030,22,0	1/1:6,21:29:18.06:899,18,0	1/1:7,30:45:10.85:549,11,0	0/0:45,0:45:99:0,120,3321	0/0:48,0:48:99:0,117,3277	1/1:6,22:30:21.07:1027,21,0	1/1:6,12:22:18.06:523,18,0	1/1:7,9:23:56.94:1753,57,0	1/1:4,22:30:5.18:308,5,0	./.	0/0:10,25:43:0.46:0,0,2	0/0:3,23:32:0.87:0,1,3	0/0:5,30:46:0.88:0,1,2	0/0:5,22:33:3.54:0,4,7	1/1:5,36:45:99:4171,114,0	1/1:4,19:24:19.95:887,20,0	1/1:5,3:8:18.06:730,18,0
chr10	48763425	.	A	AGT	15056.23	PASS	AB=0.749;AC=26;AF=0.464;AN=56;BaseQRankSum=8.538;DP=1262;FS=1.135;HRun=0;HaplotypeScore=176.0618;InbreedingCoeff=0.8617;MQ=50.19;MQ0=58;MQRankSum=-1.021;QD=25.30;ReadPosRankSum=-0.467;VQSLOD=5.5067;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:79,0:79:99:0,173,2087	0/0:19,0:19:54.17:0,54,671	0/0:49,0:8:17.94:0,18,178	0/0:52,1:10:17.39:0,17,183	1/1:11,13:24:63.16:973,63,0	0/0:26,0:25:59.93:0,60,737	0/0:62,0:58:99:0,101,1312	0/1:64,9:52:80.93:1123,0,81	0/0:62,0:62:99:0,159,1975	1/1:29,28:52:97.41:1786,97,0	1/1:5,24:30:54.18:891,54,0	0/0:45,0:45:87.05:0,87,968	0/0:23,0:22:45.58:0,46,533	1/1:8,35:43:41.87:691,42,0	0/0:59,0:59:99:0,147,1816	0/0:49,0:47:99:0,117,1435	1/1:16,21:34:67.47:1080,67,0	1/1:17,11:27:46.19:692,46,0	1/1:12,8:17:39.13:625,39,0	1/1:18,19:38:75.25:1199,75,0	1/1:57,49:97:99:2603,106,0	0/0:48,0:48:99:0,99,1221	0/0:30,0:30:66.15:0,66,824	0/0:60,0:60:99:0,117,1422	0/1:11,20:31:5.56:510,0,6	1/1:16,37:48:99:1596,105,0	1/1:19,22:38:75.20:1139,75,0	1/1:6,2:7:9.03:148,9,0
chr10	48764127	.	GA	G	511.29	PASS	AB=0.913;AC=3;AF=0.054;AN=56;BaseQRankSum=4.505;DP=511;FS=1.549;HRun=9;HaplotypeScore=57.7534;InbreedingCoeff=0.6497;MQ=72.98;MQ0=9;MQRankSum=2.536;QD=9.65;ReadPosRankSum=-3.270;VQSLOD=1.3921;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,1:29:53.65:0,54,842	0/0:5,0:5:15.04:0,15,172	0/0:28,0:15:11.16:0,11,108	0/0:36,0:22:37.50:0,37,327	0/0:27,0:27:60.17:0,60,680	0/0:15,1:16:17.67:0,18,457	0/0:16,0:16:36.11:0,36,415	1/1:8,24:32:45.89:605,46,0	0/0:13,0:13:30.07:0,30,335	0/0:15,0:15:36.06:0,36,387	0/0:15,0:15:39.09:0,39,433	0/0:15,0:15:45.12:0,45,509	0/0:12,0:12:27.08:0,27,309	0/0:17,0:17:47.97:0,48,533	0/0:17,0:17:48.10:0,48,537	0/0:13,0:13:27.08:0,27,312	0/0:34,0:34:86.45:0,86,965	0/0:21,0:21:57.17:0,57,657	0/1:19,2:21:6.78:7,0,437	0/0:14,0:14:36.10:0,36,408	0/0:11,0:11:33.10:0,33,381	0/0:7,0:7:21.06:0,21,242	0/0:6,0:6:15.04:0,15,173	0/0:16,0:16:38.62:0,39,450	0/0:12,0:12:33.10:0,33,378	0/0:22,0:22:63.17:0,63,717	0/0:29,1:30:50.73:0,51,820	0/0:10,0:10:27.08:0,27,310
chr10	48764484	.	G	GCCTAGGGGGATC	41559.17	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-8.149;DP=593;FS=2.467;HRun=0;HaplotypeScore=177.2649;InbreedingCoeff=0.9974;MQ=81.22;MQ0=0;MQRankSum=-16.359;QD=104.68;ReadPosRankSum=2.006;VQSLOD=4.6675;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,117,4038	0/0:8,0:8:24.07:0,24,814	0/0:29,0:29:84.25:0,84,2732	0/0:15,0:15:32.33:0,32,1072	1/1:5,10:24:27.02:1356,27,0	0/0:14,0:14:42.13:0,42,1406	0/0:31,0:31:90.29:0,90,3001	1/1:16,1:27:75.24:3556,75,0	0/0:14,0:14:42.14:0,42,1566	1/1:2,10:23:57.10:2623,57,0	1/1:4,4:10:18.06:722,18,0	1/1:8,14:34:63.22:3619,63,0	1/1:4,6:16:30.10:1624,30,0	1/1:4,14:24:54.19:3022,54,0	0/0:21,0:21:60.15:0,60,1895	0/0:23,0:23:60.16:0,60,1967	1/1:4,10:25:36.12:1991,36,0	1/1:6,11:22:45.15:2690,45,0	1/1:11,2:19:48.12:1969,48,0	1/1:3,8:16:30.10:1633,30,0	1/1:10,8:23:39.13:1847,39,0	1/1:4,11:18:33.11:1998,33,0	1/1:4,8:14:23.76:1349,24,0	1/1:2,11:19:27.09:1658,27,0	1/1:5,7:17:36.12:1855,36,0	1/1:9,15:30:78.23:3890,78,0	1/1:4,12:24:41.98:2571,42,0	1/1:3,7:12:30.10:1587,30,0
chr10	48765475	.	TG	T	1070.31	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.556;DP=647;FS=4.464;HRun=2;HaplotypeScore=62.8617;InbreedingCoeff=0.9981;MQ=92.15;MQ0=0;MQRankSum=-0.481;QD=31.48;ReadPosRankSum=-4.931;VQSLOD=1.7342;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,108,1615	0/0:12,0:12:36.12:0,36,537	0/0:29,0:29:78.26:0,78,1153	0/0:26,0:26:58.44:0,58,910	0/0:15,0:15:42.10:0,42,605	0/0:29,0:29:87.26:0,87,1260	0/0:27,0:27:75.24:0,75,1105	1/1:3,31:34:90.29:1165,90,0	0/0:30,0:30:90.29:0,90,1326	0/0:28,0:28:84.22:0,84,1206	0/0:9,0:9:27.09:0,27,405	0/0:21,0:21:63.21:0,63,943	0/0:22,0:22:66.22:0,66,988	0/0:23,0:23:69.23:0,69,1034	0/0:26,0:26:78.26:0,78,1168	0/0:18,0:18:54.17:0,54,790	0/0:23,0:23:66.22:0,66,988	0/0:29,0:29:87.27:0,87,1282	0/0:25,0:25:75.25:0,75,1106	0/0:12,0:12:36.12:0,36,538	0/0:32,0:32:81.26:0,81,1192	0/0:26,0:26:78.24:0,78,1127	0/0:15,0:15:39.13:0,39,581	0/0:24,0:24:72.24:0,72,1078	0/0:19,0:19:57.18:0,57,834	0/0:22,0:22:63.21:0,63,944	0/0:24,0:24:72.24:0,72,1079	0/0:10,0:10:30.10:0,30,447
chr10	48770657	.	CA	C	4384.02	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=9.436;DP=390;FS=3.152;HRun=9;HaplotypeScore=59.9411;InbreedingCoeff=0.9355;MQ=63.91;MQ0=1;MQRankSum=-2.798;QD=21.81;ReadPosRankSum=1.535;VQSLOD=5.7982;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:66.15:0,66,745	0/0:8,0:8:21.06:0,21,242	0/0:10,0:7:9:0,9,95	0/0:12,0:7:5.94:0,6,64	1/1:7,21:29:53.03:473,53,0	0/0:15,0:15:42.09:0,42,471	0/0:10,0:10:24.07:0,24,277	0/0:33,0:32:75.22:0,75,862	0/0:11,0:11:33.10:0,33,380	1/1:1,17:18:54.03:494,54,0	1/1:1,11:12:30.01:275,30,0	0/0:8,0:8:12.04:0,12,139	0/0:7,0:7:12.04:0,12,138	1/1:1,9:10:27.01:247,27,0	0/0:7,0:7:21.06:0,21,241	0/0:10,0:10:27.08:0,27,312	1/1:0,18:19:56.07:500,56,0	1/1:7,15:22:44.93:397,45,0	1/1:1,17:18:51.03:466,51,0	1/1:3,7:10:17.99:165,18,0	1/1:2,5:7:14.99:133,15,0	0/0:6,0:6:12.04:0,12,138	0/0:17,0:17:30.09:0,30,346	0/0:11,0:11:27.08:0,27,312	1/1:4,15:19:36:329,36,0	1/1:4,18:22:57.50:522,58,0	1/1:0,13:13:39.02:357,39,0	1/1:0,1:1:3:27,3,0
chr10	48770698	.	G	GA	7451.58	PASS	AB=0.944;AC=38;AF=0.679;AN=56;BaseQRankSum=-3.379;DP=393;FS=1.442;HRun=7;HaplotypeScore=48.2350;InbreedingCoeff=0.8014;MQ=70.60;MQ0=1;MQRankSum=-4.797;QD=27.30;ReadPosRankSum=0.286;VQSLOD=5.2958;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:69.10:0,69,666	0/0:9,0:9:27:0,27,247	0/1:14,0:12:7.83:8,0,149	0/1:7,1:7:16.35:16,0,71	1/1:3,23:26:60.14:708,60,0	0/0:14,1:15:7.45:0,7,311	0/0:6,0:6:15.02:0,15,145	0/0:25,0:25:63.09:0,63,604	0/0:18,0:18:51.08:0,51,492	1/1:4,23:27:72.18:853,72,0	1/1:4,10:14:27.08:326,27,0	1/1:0,18:18:45.14:544,45,0	1/1:1,4:5:9.03:109,9,0	1/1:3,5:8:18.05:214,18,0	0/0:11,0:11:30.04:0,30,284	0/0:10,0:10:24.03:0,24,232	1/1:7,11:18:33.10:398,33,0	1/1:3,17:20:51.16:616,51,0	1/1:1,13:14:39.10:459,39,0	1/1:0,7:7:18.06:217,18,0	1/1:0,4:4:9.03:109,9,0	1/1:1,4:5:12.04:145,12,0	1/1:2,9:11:33.10:392,33,0	1/1:0,9:9:27.08:326,27,0	1/1:0,26:26:72.18:853,72,0	1/1:4,14:18:39.12:471,39,0	1/1:1,17:18:48.15:580,48,0	1/1:0,3:3:9.03:109,9,0
chr10	48770891	.	A	AT	11586	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=13.210;DP=561;FS=2.093;HRun=8;HaplotypeScore=78.7873;InbreedingCoeff=0.9951;MQ=77.50;MQ0=0;MQRankSum=-2.480;QD=30.17;ReadPosRankSum=2.469;VQSLOD=4.7931;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:87.03:0,87,796	0/0:7,0:7:20.97:0,21,182	0/0:18,0:18:36.46:0,36,326	0/0:9,0:8:14.87:0,15,124	1/1:1,12:13:36.11:415,36,0	0/0:18,0:18:45.01:0,45,408	0/0:20,0:20:57.02:0,57,517	1/1:3,26:29:78.20:878,78,0	0/0:21,0:21:57.02:0,57,522	1/1:4,35:39:99:1186,105,0	1/1:3,12:15:33.03:364,33,0	1/1:3,28:31:84.25:966,84,0	1/1:0,10:10:20.96:242,21,0	1/1:1,13:14:39.12:450,39,0	0/0:33,0:33:96.04:0,96,874	0/0:18,0:18:41.98:0,42,373	1/1:2,22:24:60.18:692,60,0	1/1:1,13:14:39.12:450,39,0	1/1:4,15:19:20.68:492,21,0	1/1:1,11:12:33.10:380,33,0	1/1:4,31:35:90.27:1039,90,0	1/1:0,10:10:30.09:346,30,0	1/1:4,11:15:33.04:381,33,0	1/1:1,20:20:54.16:623,54,0	1/1:0,14:14:42.12:485,42,0	1/1:0,26:26:78.20:877,78,0	1/1:2,22:25:69.12:765,69,0	1/1:0,18:18:48.14:554,48,0
chr10	48771289	.	A	AT	558.15	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=3.880;DP=485;FS=1.698;HRun=8;HaplotypeScore=51.3808;InbreedingCoeff=0.9205;MQ=65.53;MQ0=9;MQRankSum=-4.424;QD=15.95;ReadPosRankSum=-1.453;VQSLOD=3.2032;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:72.02:0,72,658	0/0:11,0:11:29.96:0,30,262	0/0:40,0:10:8.26:0,8,91	0/0:48,0:12:14.58:0,15,128	0/0:21,0:21:63:0,63,566	0/0:11,0:11:27.01:0,27,247	0/0:10,0:10:17.99:0,18,165	0/0:37,0:37:83.99:0,84,755	0/0:10,0:10:20.98:0,21,185	0/0:23,0:23:60.02:0,60,547	0/0:18,0:18:46.83:0,47,415	1/1:4,6:11:20.91:226,21,0	1/1:3,3:8:14.01:127,14,0	0/0:9,0:9:17.99:0,18,161	0/0:8,0:8:20.98:0,21,186	0/0:11,0:11:33:0,33,294	0/0:23,0:23:69:0,69,619	0/0:11,0:11:30.02:0,30,274	0/0:25,0:25:66:0,66,596	0/0:17,0:17:41.97:0,42,376	0/0:8,0:8:12:0,12,109	1/1:1,3:4:9.02:97,9,0	1/1:2,7:9:18.05:204,18,0	1/1:0,3:3:6.02:66,6,0	0/0:19,0:19:54.03:0,54,494	0/0:28,0:28:75:0,75,671	0/0:14,0:14:33.01:0,33,302	0/0:18,0:18:54.03:0,54,494
chr10	48771304	.	A	AT	714.26	PASS	AB=0.980;AC=13;AF=0.232;AN=56;BaseQRankSum=-0.225;DP=475;FS=0.597;HRun=12;HaplotypeScore=58.0015;InbreedingCoeff=0.8442;MQ=60.28;MQ0=8;MQRankSum=-2.953;QD=6.00;ReadPosRankSum=-3.343;VQSLOD=1.0228;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:28:67.55:0,68,482	0/0:9,0:9:20.86:0,21,153	0/0:41,0:9:11.91:0,12,86	0/1:47,1:10:0:0,0,0	0/0:23,0:23:53.57:0,54,392	0/0:13,0:13:29.80:0,30,216	0/0:9,0:9:20.86:0,21,151	1/1:12,23:35:28.29:590,28,0	0/0:9,0:9:23.86:0,24,175	0/0:21,0:22:40.78:0,41,288	0/0:16,0:16:28.81:0,29,202	1/1:9,0:13:23.34:112,23,0	1/1:3,0:5:11.36:56,11,0	0/0:5,0:5:11.93:0,12,88	0/0:7,0:7:14.89:0,15,108	0/0:14,0:14:35.79:0,36,263	0/0:26,2:28:0.23:0,0,313	0/0:17,0:17:35.73:0,36,262	0/0:21,0:22:43.76:0,44,312	0/0:15,0:16:31.77:0,32,222	0/0:4,0:4:8.94:0,9,65	1/1:4,0:7:10.47:51,10,0	1/1:5,0:6:12.09:57,12,0	1/1:3,0:4:4.88:20,5,0	0/0:18,0:18:35.75:0,36,261	0/0:21,0:21:38.68:0,39,284	0/0:14,0:14:26.78:0,27,193	0/0:20,0:20:29.77:0,30,219
chr10	48772781	.	ATCTCTCTCTCTCTC	A	2587.31	PASS	AB=0.911;AC=28;AF=0.609;AN=46;BaseQRankSum=4.041;DP=564;FS=0.000;HRun=0;HaplotypeScore=210.0072;InbreedingCoeff=0.2509;MQ=68.95;MQ0=10;MQRankSum=-2.866;QD=7.43;ReadPosRankSum=0.433;VQSLOD=2.5788;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:28:22.90:78,0,23	0/0:12,0:12:9:0,9,121	./.	./.	1/1:21,1:22:3.01:35,3,0	0/0:12,0:13:3.87:0,4,25	0/0:25,0:25:10.25:0,10,126	0/0:27,0:26:3.01:0,3,54	0/0:13,0:12:3.01:0,3,62	1/1:17,1:18:3.48:117,3,0	0/1:9,0:9:0:0,0,0	1/1:29,0:33:17.55:348,18,0	1/1:16,0:16:3.67:104,4,0	1/1:14,7:21:15.05:542,15,0	0/0:22,0:24:17.85:0,18,310	0/1:23,1:25:58.43:125,0,58	1/1:16,3:18:2.46:115,2,0	1/1:13,5:18:6.02:233,6,0	1/1:18,0:21:12.11:150,12,0	./.	./.	0/1:15,3:18:20:108,0,20	1/1:13,0:13:3.48:31,3,0	1/1:15,0:16:9.03:188,9,0	0/1:10,0:15:9.63:10,0,37	0/1:23,0:23:8.14:89,0,8	1/1:24,3:27:15.03:462,15,0	./.
chr10	48772842	.	C	CTTGTTT	1094.46	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=-1.177;DP=596;FS=5.964;HRun=0;HaplotypeScore=171.1476;InbreedingCoeff=0.5778;MQ=63.39;MQ0=14;MQRankSum=-1.459;QD=16.34;ReadPosRankSum=-3.317;VQSLOD=1.9815;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:25:56.21:0,56,994	0/0:9,0:9:17.82:0,18,283	0/1:34,0:18:21.36:21,0,253	0/0:43,0:19:5.48:0,5,319	0/0:18,0:18:39.38:0,39,702	0/0:12,0:11:27.05:0,27,497	0/0:24,0:24:36.77:0,37,570	1/1:22,9:31:51.13:1179,51,0	0/0:13,0:13:33.01:0,33,614	0/0:28,0:27:54.08:0,54,983	0/0:17,0:17:41.74:0,42,836	0/0:25,0:24:53.82:0,54,863	0/0:20,0:20:50.89:0,51,808	0/0:22,0:22:41.94:0,42,666	0/0:21,0:21:47.74:0,48,807	0/0:23,0:23:60.07:0,60,1058	0/0:21,0:19:41.08:0,41,682	0/0:20,0:20:42:0,42,693	0/0:20,0:17:30.06:0,30,522	0/0:21,0:21:48:0,48,914	0/0:17,0:17:41.66:0,42,768	0/0:24,0:24:43.67:0,44,787	0/0:19,0:18:51.04:0,51,909	0/0:24,0:22:50.77:0,51,875	0/0:11,0:11:11.33:0,11,249	0/0:20,0:20:48.14:0,48,969	0/0:24,0:23:57.08:0,57,1015	0/0:7,0:6:18.01:0,18,261
chr10	48772869	.	C	CT	1999.69	PASS	AB=0.845;AC=11;AF=0.196;AN=56;BaseQRankSum=-6.151;DP=625;FS=0.880;HRun=11;HaplotypeScore=91.8756;InbreedingCoeff=0.6271;MQ=69.34;MQ0=6;MQRankSum=-0.574;QD=11.49;ReadPosRankSum=0.609;VQSLOD=3.4324;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:33:77.25:0,77,573	0/0:7,0:7:20.92:0,21,162	0/1:28,0:18:27.48:27,0,76	0/0:36,0:21:20.72:0,21,153	0/0:21,2:23:7.87:0,8,427	0/0:15,0:15:38.85:0,39,302	0/0:20,1:24:5.60:0,6,335	0/0:30,0:31:58.77:0,59,447	0/0:15,0:16:40.87:0,41,308	0/0:24,0:25:32.89:0,33,418	0/0:21,0:21:23.33:0,23,364	1/1:5,17:23:27.70:448,28,0	0/1:7,13:20:24.58:320,0,25	0/0:17,0:17:26.81:0,27,207	0/0:21,1:23:25.36:0,25,368	0/0:26,0:26:55.77:0,56,424	0/0:25,1:26:32.30:0,32,434	0/0:20,0:20:55.82:0,56,421	0/0:20,1:21:29.27:0,29,403	0/1:23,2:26:8.09:8,0,299	0/0:18,0:19:40.87:0,41,308	1/1:6,17:24:13.44:475,13,0	1/1:5,18:24:24.48:417,24,0	1/1:7,21:28:48.05:473,48,0	0/0:11,0:11:22.92:0,23,168	0/0:21,2:24:25.33:0,25,368	0/0:25,0:25:50.74:0,51,395	0/0:1,0:6:12.41:0,12,36
chr10	48774262	.	AT	A	5884.10	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=9.452;DP=525;FS=2.569;HRun=10;HaplotypeScore=53.4009;InbreedingCoeff=0.9892;MQ=69.38;MQ0=8;MQRankSum=1.142;QD=20.72;ReadPosRankSum=1.787;VQSLOD=5.8285;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:78.13:0,78,834	0/0:7,0:6:15.04:0,15,166	0/0:24,0:14:22.68:0,23,183	0/0:18,0:9:17.63:0,18,170	1/1:4,25:29:65.94:566,66,0	0/0:16,0:16:19.08:0,19,430	0/0:10,0:10:24.06:0,24,265	1/1:4,25:29:65.83:556,66,0	0/0:20,0:19:51.13:0,51,553	1/1:4,21:25:56.90:481,57,0	1/1:2,23:25:68.97:599,69,0	0/0:13,0:13:33.06:0,33,348	0/0:17,0:17:48.10:0,48,513	1/1:0,14:14:29.99:261,30,0	0/0:18,0:18:48.09:0,48,518	0/0:11,0:11:30.07:0,30,325	1/1:1,23:25:65.02:553,65,0	1/1:1,22:23:61.99:545,62,0	1/1:5,9:15:29.03:240,29,0	1/1:4,16:19:47.98:416,48,0	1/1:0,4:4:12:104,12,0	0/0:8,0:8:24.06:0,24,265	0/0:25,0:25:69.19:0,69,763	0/0:21,0:20:48.13:0,48,531	1/1:3,18:19:53.99:469,54,0	1/1:1,18:19:50.99:443,51,0	1/1:3,24:27:56.99:495,57,0	1/1:2,6:8:18:156,18,0
chr10	48775045	.	CT	C	5218.46	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=14.035;DP=807;FS=8.076;HRun=2;HaplotypeScore=109.2261;InbreedingCoeff=1.0000;MQ=85.90;MQ0=0;MQRankSum=-2.283;QD=35.02;ReadPosRankSum=3.752;VQSLOD=4.4426;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,153,2212	0/0:14,0:14:39.13:0,39,580	0/0:32,0:32:91.76:0,92,1311	0/0:28,0:28:69.13:0,69,1080	0/0:21,0:21:60.13:0,60,832	0/0:24,0:24:69.23:0,69,1024	0/0:26,0:26:75.25:0,75,1117	0/0:23,0:23:69.23:0,69,1017	0/0:30,0:30:90.30:0,90,1347	0/0:24,0:24:63.21:0,63,940	0/0:34,0:34:84.15:0,84,1146	1/1:0,43:43:99:1519,117,0	1/1:0,30:30:90.29:1169,90,0	0/0:33,0:33:99:0,99,1432	0/0:29,0:29:87.29:0,87,1304	0/0:29,0:29:87.27:0,87,1262	0/0:27,0:26:81.26:0,81,1180	0/0:19,0:19:57.18:0,57,833	0/0:21,0:21:60.20:0,60,889	0/0:38,0:38:99:0,111,1640	0/0:37,0:37:99:0,108,1612	1/1:1,24:24:54.18:701,54,0	1/1:0,17:17:48.16:622,48,0	1/1:1,33:34:93.30:1208,93,0	0/0:28,0:28:78.26:0,78,1164	0/0:33,0:33:99:0,99,1483	0/0:35,0:35:99:0,105,1572	0/0:22,0:22:66.22:0,66,989
chr10	48777890	.	TACACACACAC	T	2931.56	PASS	AB=0.865;AC=20;AF=0.385;AN=52;BaseQRankSum=3.248;DP=675;FS=8.721;HRun=0;HaplotypeScore=234.8946;InbreedingCoeff=0.5799;MQ=63.78;MQ0=12;MQRankSum=-7.007;QD=10.86;ReadPosRankSum=-2.990;VQSLOD=0.9067;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:32.99:0,33,713	0/0:8,0:8:15.05:0,15,346	./.	./.	1/1:10,6:16:3.01:53,3,0	0/0:21,0:20:45.12:0,45,1420	0/0:37,0:38:37.73:0,38,999	0/0:32,0:27:4.57:0,5,14	0/0:9,0:21:8.63:0,9,112	1/1:17,7:25:16.80:899,17,0	0/1:10,6:16:3:16,0,3	0/0:23,0:23:21:0,21,245	0/0:20,0:20:30.55:0,31,329	1/1:21,3:24:11.98:199,12,0	0/0:33,0:33:45.07:0,45,1025	0/0:20,0:21:39.11:0,39,1410	1/1:14,1:15:8.12:62,8,0	1/1:12,0:13:12.04:268,12,0	1/1:11,5:14:12.39:415,12,0	0/1:13,1:14:31.77:134,0,32	0/1:66,3:69:51.66:84,0,52	0/0:27,0:26:32.55:0,33,553	0/0:16,0:15:18.01:0,18,290	0/0:45,0:45:80.98:0,81,1602	1/1:11,7:17:3.01:89,3,0	0/1:22,1:23:6.49:448,0,6	1/1:10,7:16:15.05:447,15,0	0/0:4,0:4:0.89:0,1,2
chr10	48777933	.	ACT	A	3622.01	PASS	AB=0.995;AC=18;AF=0.321;AN=56;BaseQRankSum=-3.571;DP=863;FS=14.843;HRun=0;HaplotypeScore=210.7008;InbreedingCoeff=0.4799;MQ=46.50;MQ0=31;MQRankSum=4.131;QD=10.78;ReadPosRankSum=-0.437;VQSLOD=2.2744;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:30,1:30:4.67:5,0,382	0/1:8,0:8:40.47:40,0,52	0/0:33,0:9:5.08:0,5,129	0/1:31,0:5:11.18:11,0,47	0/0:17,0:16:17.83:0,18,139	0/0:29,1:29:25.25:0,25,661	0/0:39,0:38:4.85:0,5,570	0/0:53,0:31:83.78:0,84,722	0/0:36,1:36:60.09:0,60,485	0/0:37,0:35:31.28:0,31,516	0/0:21,0:21:22.38:0,22,222	1/1:32,0:32:60.40:526,60,0	1/1:30,0:29:63.52:606,64,0	0/0:35,0:34:43.29:0,43,500	1/1:39,1:39:45.52:544,46,0	0/0:33,0:32:60.84:0,61,854	0/0:20,0:20:0.72:0,1,192	0/1:20,0:20:5:5,0,256	0/0:19,0:14:25.82:0,26,178	0/1:23,0:22:14.83:15,0,190	0/0:104,0:93:18.65:0,19,772	1/1:21,3:23:38.60:377,39,0	1/1:18,2:19:35.82:352,36,0	1/1:48,7:55:58.27:1113,58,0	0/0:19,0:18:15.83:0,16,128	0/1:22,0:20:28.94:29,0,259	0/0:19,0:19:17.53:0,18,133	0/0:11,0:11:26.91:0,27,211
chr10	48778096	.	CACGCTCAT	C	4316.14	PASS	AB=0.650;AC=24;AF=0.429;AN=56;BaseQRankSum=12.769;DP=810;FS=0.456;HRun=0;HaplotypeScore=299.4965;InbreedingCoeff=0.8163;MQ=55.58;MQ0=11;MQRankSum=-8.293;QD=22.25;ReadPosRankSum=-1.975;VQSLOD=3.4854;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:56:99:0,129,5129	0/0:16,0:15:39.12:0,39,1489	0/0:40,0:18:18.05:0,18,1273	0/0:35,0:20:44.13:0,44,1157	1/1:3,11:13:3:48,3,0	0/0:33,0:32:71.71:0,72,3289	0/0:39,0:36:95.97:0,96,3638	1/1:9,6:10:17.97:303,18,0	0/0:55,0:54:99:0,132,5529	1/1:8,7:14:31.84:811,32,0	0/1:0,2:2:0:0,0,0	0/0:44,0:44:99:0,117,4737	0/0:37,0:37:86.95:0,87,3533	1/1:5,22:27:14.62:284,15,0	0/0:64,0:64:99:0,162,6205	0/0:63,0:62:99:0,172,7089	1/1:4,3:7:6.91:148,7,0	1/1:11,8:19:1.23:550,1,0	1/1:2,11:12:32.47:683,32,0	0/0:2,13:15:0.08:0,0,0	0/1:30,10:35:0.09:2,0,0	0/0:30,0:30:75.01:0,75,3133	0/0:22,0:22:41.90:0,42,1696	0/0:66,0:66:99:0,168,6890	1/1:3,3:6:2.92:17,3,0	1/1:7,15:20:38.09:821,38,0	1/1:1,6:7:12.04:325,12,0	1/1:4,2:6:12.04:322,12,0
chr10	48778098	.	CGCTCAT	C	2871.24	PASS	AB=0.936;AC=25;AF=0.446;AN=56;BaseQRankSum=13.309;DP=782;FS=4.034;HRun=0;HaplotypeScore=273.5400;InbreedingCoeff=0.8344;MQ=56.04;MQ0=8;MQRankSum=-7.782;QD=15.19;ReadPosRankSum=-2.477;VQSLOD=2.5377;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:49,2:52:99:0,129,4383	0/0:15,0:14:39.11:0,39,1310	0/0:40,0:18:18.01:0,18,1065	0/0:36,0:21:55.78:0,56,1128	1/1:12,1:12:2.99:48,3,0	0/0:34,0:33:71.88:0,72,2788	0/0:35,0:33:94.69:0,95,3050	1/1:10,0:8:22.71:206,23,0	0/0:56,0:55:99:0,138,4771	1/1:12,3:14:35.79:572,36,0	0/1:2,0:2:0:0,0,0	0/0:45,0:45:99:0,120,3995	0/0:36,0:36:96.09:0,96,3259	1/1:25,1:26:16.44:215,16,0	0/0:68,0:68:99:0,180,5663	0/0:60,0:59:99:0,172,6019	1/1:5,1:6:6.02:94,6,0	1/1:16,3:19:7.03:461,7,0	1/1:11,0:11:32.96:427,33,0	0/1:13,1:14:0.26:1,0,0	0/1:30,5:30:0.44:2,0,0	0/0:30,0:30:77.07:0,77,2724	0/0:22,0:22:44.93:0,45,1514	0/0:62,1:63:99:0,168,5804	1/1:5,1:6:3.41:18,3,0	1/1:20,0:18:40.79:561,41,0	1/1:6,0:6:12.04:218,12,0	1/1:2,4:6:12.04:247,12,0
chr10	48778329	.	TCA	T	8199.34	PASS	AB=0.676;AC=25;AF=0.481;AN=52;BaseQRankSum=13.668;DP=997;FS=1.328;HRun=0;HaplotypeScore=190.0333;InbreedingCoeff=0.7606;MQ=48.99;MQ0=44;MQRankSum=-8.120;QD=16.77;ReadPosRankSum=-1.996;VQSLOD=4.6709;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:49:99:0,120,2014	0/0:20,0:20:47.64:0,48,724	./.	./.	1/1:7,17:22:21.07:279,21,0	0/0:30,0:29:67.10:0,67,1127	0/0:45,0:43:93.27:0,93,1496	0/1:38,24:39:99:673,0,155	0/0:54,0:52:99:0,135,2368	0/1:17,37:49:6.44:1440,0,6	1/1:3,9:12:18.06:239,18,0	0/0:40,0:40:95.78:0,96,1556	0/0:38,0:37:88.50:0,89,1387	1/1:12,27:39:39.25:487,39,0	0/0:48,0:48:99:0,126,2033	0/0:57,0:56:99:0,150,2491	1/1:19,10:27:7.33:428,7,0	0/1:12,8:19:79.52:365,0,80	1/1:16,6:10:23.91:293,24,0	1/1:3,19:22:18.97:215,19,0	1/1:60,29:77:99:1439,111,0	0/0:30,0:29:78.25:0,78,1318	0/0:24,0:24:57.16:0,57,939	0/0:61,0:61:99:0,126,2153	1/1:7,22:29:20.35:356,20,0	1/1:8,45:47:89.77:1480,90,0	1/1:9,10:17:21.47:276,21,0	1/1:9,4:12:10.65:230,11,0
chr10	48778348	.	TACACACTC	T	8193.34	PASS	AB=0.920;AC=24;AF=0.444;AN=54;BaseQRankSum=12.830;DP=977;FS=0.000;HRun=0;HaplotypeScore=302.4674;InbreedingCoeff=0.8737;MQ=48.17;MQ0=37;MQRankSum=-6.360;QD=19.60;ReadPosRankSum=-2.777;VQSLOD=3.2357;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:87.13:0,87,3143	0/0:19,0:19:36.59:0,37,1172	./.	0/0:12,0:5:15.05:0,15,387	1/1:15,11:24:9.49:137,9,0	0/0:25,0:24:48.15:0,48,1676	0/0:43,0:41:69.23:0,69,2469	0/0:53,0:39:90.26:0,90,2255	0/0:58,0:56:99:0,127,4668	1/1:37,17:50:54.40:1905,54,0	1/1:10,3:13:9.03:201,9,0	0/0:47,0:47:92.22:0,92,3230	0/0:40,0:39:84.29:0,84,2790	1/1:19,15:34:20.49:426,20,0	0/0:46,0:46:99:0,99,3566	0/0:50,0:49:99:0,114,3789	1/1:29,5:31:13.17:841,13,0	0/1:17,2:19:0.78:458,0,1	0/1:25,2:15:4.93:254,0,5	1/1:16,11:27:26.54:485,27,0	1/1:69,2:64:27.71:373,28,0	0/0:27,0:26:60.21:0,60,2306	0/0:20,0:20:39.13:0,39,1429	0/0:57,0:57:89.35:0,89,3136	1/1:14,11:25:11.74:225,12,0	1/1:42,15:53:61.69:2024,62,0	1/1:4,15:18:20.85:497,21,0	1/1:7,2:8:18.06:368,18,0
chr10	48778431	.	A	ACTCT	9008.79	PASS	AB=0.972;AC=34;AF=0.607;AN=56;BaseQRankSum=1.202;DP=777;FS=12.925;HRun=0;HaplotypeScore=207.5531;InbreedingCoeff=0.6857;MQ=48.19;MQ0=22;MQRankSum=-1.668;QD=18.05;ReadPosRankSum=-2.848;VQSLOD=3.0948;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:33:59.83:0,60,936	0/0:13,0:12:30.03:0,30,469	0/0:43,0:12:21.09:0,21,383	0/0:50,0:16:30.46:0,30,392	1/1:16,0:16:0.94:3,1,0	0/0:19,0:19:49.28:0,49,812	0/0:21,0:20:31.69:0,32,504	1/1:31,0:27:35.99:421,36,0	0/0:36,0:35:67.86:0,68,1022	1/1:41,0:40:64.07:1453,64,0	1/1:14,0:14:6.02:102,6,0	0/1:32,0:33:26.11:223,0,26	0/1:24,0:23:13.87:154,0,14	1/1:7,2:31:17.85:351,18,0	0/0:36,0:36:80.65:0,81,1221	0/0:26,0:26:56.38:0,56,863	1/1:37,2:40:76.07:1286,76,0	1/1:18,1:20:24.97:664,25,0	1/1:19,0:18:33.10:545,33,0	1/1:19,1:20:26.95:411,27,0	1/1:46,1:46:60.86:974,61,0	0/1:19,0:19:2.75:47,0,3	1/1:18,0:17:0.13:1,0,0	0/1:31,0:34:0.72:61,0,1	1/1:19,1:22:33.49:562,33,0	1/1:31,1:31:84.07:1288,84,0	1/1:15,0:14:21.51:310,22,0	1/1:3,17:20:6.02:152,6,0
chr10	48778441	.	T	TCTCTCA	9650.64	PASS	AB=0.934;AC=31;AF=0.554;AN=56;BaseQRankSum=-0.004;DP=777;FS=15.382;HRun=0;HaplotypeScore=213.9272;InbreedingCoeff=0.5445;MQ=47.35;MQ0=24;MQRankSum=-2.917;QD=19.70;ReadPosRankSum=-1.091;VQSLOD=2.6871;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:34:65.89:0,66,1188	0/0:10,0:13:32.78:0,33,583	0/0:41,0:11:23.07:0,23,387	0/0:49,0:13:33.47:0,33,423	1/1:0,17:20:1.89:3,2,0	0/0:19,0:20:55.27:0,55,992	0/0:28,0:28:68.07:0,68,871	1/1:22,0:17:34.77:383,35,0	0/0:34,0:33:75.55:0,76,1299	1/1:38,2:39:73.39:1597,73,0	0/1:4,11:17:11.22:137,0,11	0/1:26,0:28:99:213,0,113	0/1:19,0:18:81.33:239,0,81	0/1:31,0:32:1.29:429,0,1	0/0:35,0:37:91.89:0,92,1550	0/0:27,0:28:65.35:0,65,1043	1/1:39,0:40:82.47:1336,82,0	1/1:20,0:20:16.80:659,17,0	1/1:18,0:17:35.74:571,36,0	1/1:20,0:21:34.44:492,34,0	1/1:48,0:44:45.37:907,45,0	0/1:17,0:18:13.70:47,0,14	0/1:17,0:16:0.30:1,0,0	0/1:26,0:28:20.12:54,0,20	1/1:22,3:25:22.68:654,23,0	1/1:34,2:34:81.41:1423,81,0	1/1:18,0:17:12.22:374,12,0	1/1:19,0:19:9.02:131,9,0
chr10	48778965	.	G	GGC	337.68	PASS	AC=10;AF=0.185;AN=54;BaseQRankSum=1.110;DP=352;FS=6.357;HRun=0;HaplotypeScore=56.4171;InbreedingCoeff=0.8029;MQ=71.11;MQ0=17;MQRankSum=-0.870;QD=17.77;ReadPosRankSum=0.209;VQSLOD=2.7404;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:18:35.94:0,36,407	0/0:7,0:7:14.97:0,15,143	0/0:15,0:11:27.05:0,27,335	0/0:23,0:15:36.07:0,36,485	0/0:7,0:7:9.03:0,9,138	0/0:17,0:16:36.09:0,36,500	0/0:18,0:16:36.11:0,36,528	0/0:12,0:11:6.82:0,7,165	0/0:13,0:12:33.04:0,33,437	0/0:18,0:18:42.03:0,42,520	0/0:8,0:8:12.04:0,12,183	1/1:4,1:5:12.01:152,12,0	1/1:1,4:5:11.97:172,12,0	0/0:17,0:16:44.98:0,45,531	0/0:20,0:20:42.01:0,42,563	0/0:11,0:11:27.09:0,27,413	0/0:27,0:25:68.79:0,69,957	0/0:20,0:20:60.04:0,60,735	0/0:9,0:9:24.01:0,24,282	0/0:16,0:14:32.46:0,32,353	0/0:27,0:27:56.83:0,57,810	1/1:3,2:4:3.48:53,3,0	1/1:1,1:2:3:52,3,0	1/1:0,2:2:3.01:52,3,0	0/0:10,0:9:20.89:0,21,300	0/0:12,0:11:23.77:0,24,297	0/0:7,0:7:15.02:0,15,187	./.
chr10	48779049	.	G	GA	616.63	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=2.968;DP=455;FS=1.522;HRun=9;HaplotypeScore=65.7624;InbreedingCoeff=0.7818;MQ=58.95;MQ0=6;MQRankSum=-5.883;QD=8.81;ReadPosRankSum=-0.275;VQSLOD=1.6961;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,1:32:40.68:0,41,547	0/0:6,0:6:18:0,18,156	0/0:23,0:8:12.02:0,12,57	0/1:28,0:11:3.38:7,0,3	0/0:18,0:17:39.87:0,40,340	0/0:13,0:13:29.59:0,30,245	0/0:16,0:16:34.79:0,35,290	0/0:25,0:26:56.83:0,57,489	0/0:13,0:13:38.99:0,39,338	0/0:22,0:21:47.82:0,48,404	0/0:7,0:7:17.85:0,18,152	1/1:5,9:14:21.05:228,21,0	1/1:7,5:12:27.03:276,27,0	0/0:11,0:11:6.39:0,6,142	0/0:12,0:12:26.96:0,27,234	0/0:8,0:8:14.97:0,15,127	0/0:34,0:34:85.45:0,85,720	0/0:28,0:28:63.94:0,64,591	0/0:19,0:20:52.99:0,53,442	0/0:20,0:18:36.24:0,36,296	0/0:18,0:18:38.21:0,38,318	1/1:5,2:7:12.03:130,12,0	1/1:1,7:7:12.03:130,12,0	0/0:0,3:2:0.47:0,0,1	0/0:21,0:19:53.99:0,54,467	0/0:17,1:18:5.80:0,6,275	0/0:14,0:14:32.95:0,33,286	0/0:1,0:1:3:0,3,26
chr10	48779066	.	G	GA	400.15	PASS	AB=0.960;AC=12;AF=0.214;AN=56;BaseQRankSum=1.733;DP=477;FS=0.774;HRun=9;HaplotypeScore=74.8292;InbreedingCoeff=0.6592;MQ=67.57;MQ0=10;MQRankSum=-3.403;QD=3.88;ReadPosRankSum=-2.981;VQSLOD=-0.5439;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:72.87:0,73,625	0/0:6,0:6:12:0,12,104	0/1:44,0:16:25.18:25,0,81	0/0:48,0:24:6.63:0,7,193	0/0:23,0:23:44.87:0,45,383	0/0:9,0:9:17.36:0,17,138	0/0:20,0:20:44.95:0,45,383	0/0:15,0:15:38.99:0,39,339	0/0:12,0:12:32.99:0,33,286	0/0:17,1:17:5.79:0,6,277	0/0:9,0:9:20.97:0,21,177	1/1:6,8:14:21.89:217,22,0	1/1:6,4:10:11.99:113,12,0	0/0:8,0:8:12.16:0,12,148	0/0:10,0:10:23.97:0,24,205	0/0:8,0:8:18:0,18,156	0/0:34,0:34:74.80:0,75,634	0/0:24,0:24:53.37:0,53,489	0/0:26,0:27:55.13:0,55,457	0/0:12,0:12:29.95:0,30,251	0/0:21,0:21:47.98:0,48,415	1/1:1,5:6:12.03:130,12,0	1/1:4,4:7:6.01:64,6,0	1/1:3,1:3:0.47:1,0,0	0/0:21,0:20:53.98:0,54,469	0/1:15,1:16:0.04:0,0,225	0/0:17,0:17:38.91:0,39,329	0/0:2,0:2:3:0,3,26
chr10	48779080	.	TG	T	3875.24	PASS	AB=0.902;AC=28;AF=0.519;AN=54;BaseQRankSum=1.007;DP=471;FS=6.628;HRun=10;HaplotypeScore=64.6404;InbreedingCoeff=0.7827;MQ=69.81;MQ0=8;MQRankSum=1.287;QD=14.85;ReadPosRankSum=3.995;VQSLOD=3.9050;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:33:25.35:0,25,496	0/0:6,0:6:15.04:0,15,166	0/1:39,2:16:2.73:3,0,112	0/0:46,0:26:34.41:0,34,286	1/1:4,16:20:32.93:280,33,0	0/0:9,0:9:12.03:0,12,133	0/0:25,0:25:57.07:0,57,590	0/0:20,0:20:48.13:0,48,531	0/0:13,0:13:21.04:0,21,223	1/1:6,11:17:29.98:260,30,0	1/1:3,7:11:23.02:186,23,0	0/0:9,0:13:8.51:0,9,43	0/0:6,0:8:8.66:0,9,49	1/1:1,8:9:20.99:182,21,0	0/0:12,1:13:4.02:0,4,273	0/1:7,1:8:1.99:2,0,208	1/1:4,21:25:59.98:520,60,0	1/1:2,19:21:53.99:469,54,0	1/1:6,15:21:47.97:412,48,0	1/1:2,9:11:26.99:234,27,0	1/1:3,20:23:47.98:417,48,0	./.	0/0:5,0:5:2.84:0,3,14	0/0:3,0:8:2.59:0,3,14	1/1:4,15:19:44.99:390,45,0	1/1:4,8:12:23.99:208,24,0	1/1:3,14:17:32.98:286,33,0	1/1:1,3:4:2.99:26,3,0
chr10	48780789	.	T	TTTTTC	9387.80	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=-4.545;DP=620;FS=6.803;HRun=0;HaplotypeScore=133.0113;InbreedingCoeff=0.8809;MQ=67.88;MQ0=10;MQRankSum=-9.662;QD=27.61;ReadPosRankSum=-0.312;VQSLOD=4.0879;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,105,1852	0/0:13,0:13:15.05:0,15,278	0/0:27,0:17:8.89:0,9,104	0/1:38,0:26:29.06:29,0,312	1/1:10,10:19:24.08:614,24,0	0/0:13,0:13:24.08:0,24,445	0/0:27,0:27:57.15:0,57,1020	1/1:35,0:35:46.55:578,47,0	0/0:13,0:13:27.08:0,27,471	1/1:9,15:24:42.55:1053,43,0	1/1:8,8:16:24:603,24,0	0/0:19,0:19:24.01:0,24,371	0/0:19,0:19:41.73:0,42,615	1/1:9,5:15:9.03:254,9,0	0/0:19,0:19:42.11:0,42,653	0/0:14,0:14:33.10:0,33,582	1/1:17,6:24:18.05:508,18,0	1/1:10,10:19:5.39:412,5,0	1/1:11,13:25:44.95:852,45,0	1/1:5,17:22:39.37:1134,39,0	1/1:12,8:19:9.03:235,9,0	0/0:20,0:20:24.08:0,24,419	0/0:28,0:28:47.90:0,48,681	0/0:20,0:20:42.03:0,42,600	1/1:6,9:15:15.05:424,15,0	1/1:15,14:29:51.02:1031,51,0	1/1:14,15:28:38.23:1067,38,0	1/1:0,8:8:21.07:594,21,0
chr10	48781177	.	ATGTG	A	641.92	PASS	AB=0.773;AC=9;AF=0.214;AN=42;BaseQRankSum=2.161;DP=488;FS=24.715;HRun=0;HaplotypeScore=101.1971;InbreedingCoeff=0.6223;MQ=55.22;MQ0=11;MQRankSum=-0.315;QD=6.83;ReadPosRankSum=2.664;VQSLOD=0.3964;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:24.05:0,24,361	./.	./.	./.	0/0:16,0:14:3.01:0,3,52	0/0:21,0:21:21.07:0,21,384	0/0:11,0:13:14.63:0,15,270	0/0:33,0:32:11.48:0,11,101	0/0:16,0:18:25.91:0,26,525	0/0:23,0:23:21.01:0,21,264	./.	1/1:21,2:25:15.03:193,15,0	1/1:9,2:12:4.36:90,4,0	0/0:21,0:20:6.01:0,6,78	0/0:16,0:16:27.07:0,27,493	0/0:11,0:20:18.06:0,18,314	0/0:26,0:26:3.48:0,3,45	0/0:18,0:17:14.99:0,15,173	0/0:20,0:18:12.03:0,12,164	./.	0/0:20,0:19:3.48:0,3,60	1/1:7,8:15:15.05:232,15,0	1/1:5,3:8:3.01:46,3,0	0/1:24,10:34:6.27:214,0,6	./.	0/0:20,0:17:30.09:0,30,431	0/0:24,0:24:20.91:0,21,268	./.
chr10	48786133	.	A	AT	10382.44	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=12.125;DP=497;FS=7.608;HRun=7;HaplotypeScore=80.6859;InbreedingCoeff=0.9804;MQ=76.22;MQ0=0;MQRankSum=-2.304;QD=30.01;ReadPosRankSum=1.809;VQSLOD=5.1557;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,111,1072	0/0:7,0:7:18.03:0,18,174	0/0:13,0:13:7.81:0,8,269	0/0:7,0:7:12.01:0,12,115	1/1:0,17:17:48.11:563,48,0	0/0:16,0:16:48.08:0,48,463	0/0:24,0:24:66.10:0,66,637	1/1:4,25:29:75.11:829,75,0	0/0:13,0:13:36.05:0,36,348	1/1:3,16:19:51.16:614,51,0	1/1:2,14:16:42.09:491,42,0	1/1:2,9:11:33.10:397,33,0	1/1:2,19:22:57.17:687,57,0	1/1:3,11:14:30.07:348,30,0	0/0:13,0:13:30.05:0,30,290	0/0:16,0:16:45.07:0,45,435	1/1:2,33:35:93.29:1123,93,0	1/1:3,18:21:54.17:652,54,0	1/1:6,17:23:54.14:630,54,0	1/1:2,14:16:39.12:468,39,0	1/1:2,11:13:27.08:326,27,0	1/1:0,8:8:21.06:254,21,0	1/1:1,8:9:24.07:290,24,0	1/1:6,26:31:75.23:906,75,0	1/1:0,13:13:39.12:471,39,0	1/1:2,9:11:24.07:290,24,0	1/1:2,22:24:57.17:682,57,0	1/1:0,13:13:30.09:361,30,0
chr10	48786266	.	G	GA	4197.91	PASS	AB=0.803;AC=37;AF=0.661;AN=56;BaseQRankSum=-2.352;DP=571;FS=1.404;HRun=13;HaplotypeScore=64.4822;InbreedingCoeff=0.2336;MQ=54.55;MQ0=26;MQRankSum=0.880;QD=8.75;ReadPosRankSum=-1.442;VQSLOD=2.4286;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:42,4:46:47.01:47,0,343	0/1:6,1:6:13:13,0,67	0/1:17,0:10:26.34:28,0,26	0/0:6,0:7:0.78:0,1,32	1/1:14,6:19:29.22:228,29,0	0/0:21,0:23:50.52:0,51,318	0/0:20,2:24:11.04:0,11,204	1/1:14,17:30:6.60:347,7,0	0/1:12,1:10:4.09:4,0,117	1/1:8,10:17:28.18:236,28,0	1/1:3,8:9:21.02:194,21,0	1/1:10,12:21:3.44:174,3,0	1/1:12,3:15:20.86:181,21,0	1/1:6,8:14:15.02:139,15,0	0/0:14,0:15:26.37:0,26,151	0/0:20,0:21:15.62:0,16,235	1/1:24,7:28:0.47:358,0,0	1/1:17,8:20:19.89:309,20,0	0/1:9,12:22:1.50:205,0,1	0/1:17,5:21:5.37:207,0,5	1/1:4,6:10:8.15:106,8,0	0/1:7,2:9:29.20:35,0,29	1/1:20,6:24:28.93:289,29,0	1/1:19,3:17:6.90:195,7,0	1/1:6,16:21:12.45:249,12,0	0/1:10,11:21:5.55:211,0,6	1/1:21,5:25:32.98:288,33,0	0/1:8,13:21:11.05:155,0,11
chr10	48786964	.	CA	C	16990.08	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=15.582;DP=775;FS=12.650;HRun=4;HaplotypeScore=81.0502;InbreedingCoeff=0.9997;MQ=73.60;MQ0=0;MQRankSum=-2.618;QD=32.18;ReadPosRankSum=3.339;VQSLOD=4.5392;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,114,1594	0/0:8,0:8:24.08:0,24,336	0/0:34,0:34:84.99:0,85,1210	0/0:22,0:22:60.13:0,60,789	1/1:1,31:32:90.23:1063,90,0	0/0:33,0:33:93.31:0,93,1301	0/0:26,0:26:75.22:0,75,1003	1/1:3,24:27:72.22:864,72,0	0/0:28,0:28:81.26:0,81,1119	1/1:2,36:38:99:1171,102,0	1/1:1,18:19:48.15:575,48,0	1/1:1,36:37:99:1224,102,0	1/1:1,28:29:78.24:936,78,0	1/1:1,25:26:72.22:864,72,0	0/0:34,0:34:99:0,99,1370	0/0:22,0:22:63.20:0,63,865	1/1:1,29:30:75.19:884,75,0	1/1:2,21:23:57.17:684,57,0	1/1:2,19:21:57.16:665,57,0	1/1:1,33:34:96.29:1151,96,0	1/1:0,29:29:63.19:756,63,0	1/1:1,22:23:63.19:756,63,0	1/1:0,21:21:60.18:719,60,0	1/1:1,28:29:84.26:1008,84,0	1/1:0,27:27:75.23:900,75,0	1/1:2,31:33:93.29:1116,93,0	1/1:1,37:38:99:1223,102,0	1/1:0,12:12:36.11:432,36,0
chr10	48787771	.	A	ACTT	28614.12	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-12.169;DP=706;FS=4.503;HRun=0;HaplotypeScore=99.1636;InbreedingCoeff=0.9998;MQ=69.84;MQ0=1;MQRankSum=-5.587;QD=59.74;ReadPosRankSum=-0.859;VQSLOD=6.2923;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:62,0:62:99:0,178,3077	0/0:16,0:16:48.15:0,48,813	0/0:16,0:16:42.11:0,42,643	0/0:17,0:18:51.17:0,51,798	1/1:3,17:23:57.15:1254,57,0	0/0:26,0:26:75.20:0,75,1262	0/0:20,0:20:57.18:0,57,971	1/1:9,23:35:99:2309,105,0	0/0:20,0:20:60.21:0,60,1059	1/1:3,26:30:90.28:1946,90,0	1/1:2,20:24:69.19:1540,69,0	1/1:1,10:11:27.09:623,27,0	1/1:1,18:20:57.16:1298,57,0	1/1:2,22:26:63.22:1484,63,0	0/0:28,0:28:81.26:0,81,1401	0/0:21,0:21:63.20:0,63,1084	1/1:0,20:20:51.18:1204,51,0	1/1:2,19:21:54.19:1271,54,0	1/1:9,19:29:84.26:1832,84,0	1/1:5,31:37:99:2211,102,0	1/1:4,26:31:75.69:1702,76,0	1/1:1,18:21:54.19:1240,54,0	1/1:6,21:31:57.15:1261,57,0	1/1:0,29:29:69.71:1633,70,0	1/1:0,20:20:60.21:1402,60,0	1/1:7,23:29:81.28:1898,81,0	1/1:3,25:29:81.20:1797,81,0	1/1:0,10:10:30.10:709,30,0
chr10	48793523	.	AC	A	5596.28	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=8.960;DP=689;FS=6.365;HRun=3;HaplotypeScore=85.8966;InbreedingCoeff=0.9968;MQ=78.33;MQ0=0;MQRankSum=-2.039;QD=33.11;ReadPosRankSum=1.224;VQSLOD=5.2431;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,114,1535	0/0:5,0:5:15.05:0,15,214	0/0:23,0:23:51.69:0,52,790	0/0:25,0:23:63.05:0,63,759	0/0:27,0:27:78.24:0,78,1095	0/0:20,0:20:57.17:0,57,793	0/0:29,0:29:84.20:0,84,1109	1/1:2,36:38:99:1300,108,0	0/0:19,0:19:57.19:0,57,815	0/0:29,0:29:87.27:0,87,1184	0/0:12,0:12:36.12:0,36,514	1/1:1,33:34:90.28:1108,90,0	1/1:1,25:26:66.20:807,66,0	0/0:25,0:25:75.23:0,75,1045	0/0:27,0:27:81.26:0,81,1131	0/0:21,0:21:60.18:0,60,838	0/0:30,0:30:87.28:0,87,1223	0/0:24,0:24:69.23:0,69,974	0/0:21,0:21:60.10:0,60,797	0/0:24,0:24:69.23:0,69,987	0/0:26,0:26:75.23:0,75,1052	1/1:0,21:21:54.13:651,54,0	1/1:0,22:22:66.21:815,66,0	1/1:4,24:28:75.22:915,75,0	0/0:27,0:27:81.26:0,81,1126	0/0:31,0:31:90.29:0,90,1269	0/0:18,0:18:48.15:0,48,670	0/0:18,0:18:51.11:0,51,670
chr10	48795972	.	G	GT	4733.91	PASS	AB=0.706;AC=37;AF=0.661;AN=56;BaseQRankSum=10.115;DP=495;FS=24.390;HRun=7;HaplotypeScore=72.5375;InbreedingCoeff=0.8530;MQ=66.63;MQ0=5;MQRankSum=-1.591;QD=14.35;ReadPosRankSum=1.099;VQSLOD=3.0723;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:96.28:0,96,1175	0/0:11,0:11:33.08:0,33,392	0/0:14,0:9:21.06:0,21,249	0/0:25,0:19:44.24:0,44,464	1/1:5,21:27:43.88:564,44,0	0/0:18,0:18:48.08:0,48,574	0/0:19,0:18:51.06:0,51,598	1/1:25,1:32:26.94:169,27,0	0/0:16,0:16:45.14:0,45,557	1/1:3,12:15:12.52:241,13,0	1/1:3,16:18:21.59:333,22,0	1/1:4,11:15:16.48:195,16,0	0/1:7,5:12:13.78:85,0,14	1/1:3,12:16:23.85:239,24,0	0/0:14,0:14:39.12:0,39,483	0/0:16,0:16:48.15:0,48,593	1/1:3,0:17:7.30:36,7,0	1/1:6,14:20:37.43:395,37,0	1/1:3,16:18:45.76:421,46,0	1/1:5,13:18:5.76:210,6,0	1/1:3,17:20:30.58:358,31,0	1/1:1,8:10:17.92:172,18,0	1/1:4,7:11:15.04:163,15,0	1/1:6,14:20:5.41:295,5,0	1/1:3,6:9:9.02:99,9,0	1/1:3,9:13:15.91:244,16,0	1/1:6,15:21:12.64:219,13,0	1/1:0,13:13:27.07:296,27,0
chr10	48797012	.	TA	T	740.38	PASS	AB=0.819;AC=16;AF=0.286;AN=56;BaseQRankSum=6.515;DP=548;FS=1.379;HRun=15;HaplotypeScore=88.2031;InbreedingCoeff=-0.0664;MQ=66.59;MQ0=2;MQRankSum=-4.622;QD=2.56;ReadPosRankSum=0.172;VQSLOD=0.0020;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,2:26:14.53:0,15,338	0/0:3,0:3:5.97:0,6,44	0/0:24,0:14:0.51:0,1,84	0/0:11,0:8:5.87:0,6,40	0/1:29,5:36:47.40:47,0,329	0/0:18,1:22:18.77:0,19,300	0/1:10,3:14:8.70:9,0,165	1/1:10,0:33:46.61:135,47,0	0/0:14,1:15:10.72:0,11,211	0/0:14,2:17:4.46:0,4,138	0/0:19,2:24:8.97:0,9,284	0/1:6,5:12:26.65:97,0,27	0/1:10,5:16:27.15:94,0,27	0/0:14,1:16:10.50:0,11,190	0/0:18,1:19:11.67:0,12,277	0/1:21,2:23:2.41:2,0,226	0/1:30,3:36:4.02:4,0,402	0/0:19,0:19:37.51:0,38,286	0/1:19,1:24:29.77:30,0,178	0/1:15,1:16:0.06:0,0,154	0/1:8,0:9:28.62:29,0,39	0/1:6,10:17:61.26:133,0,61	1/1:9,9:20:38.70:228,39,0	0/1:6,5:11:22.63:84,0,23	0/1:18,3:21:1.75:2,0,257	0/0:10,1:12:4.66:0,5,147	0/0:31,1:34:59.61:0,60,482	0/0:14,1:15:4.71:0,5,158
chr10	48797050	.	GT	G	9462.62	PASS	AB=0.939;AC=40;AF=0.714;AN=56;BaseQRankSum=9.167;DP=498;FS=1.267;HRun=6;HaplotypeScore=61.3680;InbreedingCoeff=0.8582;MQ=60.40;MQ0=3;MQRankSum=1.388;QD=25.03;ReadPosRankSum=-0.037;VQSLOD=4.4853;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:90.28:0,90,1166	0/0:6,0:6:18.06:0,18,237	0/1:13,1:8:5.49:5,0,98	0/1:15,0:14:4.20:4,0,129	1/1:2,29:31:84.21:901,84,0	0/0:23,0:23:63.20:0,63,829	0/0:19,0:19:54.13:0,54,691	1/1:4,27:31:78.19:835,78,0	0/0:12,0:12:33.11:0,33,434	1/1:2,14:16:45.10:475,45,0	1/1:1,20:21:60.15:643,60,0	1/1:2,14:16:42.11:451,42,0	1/1:0,15:15:42.11:451,42,0	1/1:1,13:14:33.08:355,33,0	0/0:24,0:24:72.23:0,72,947	0/0:6,0:6:12.04:0,12,157	1/1:3,30:33:82.76:873,83,0	1/1:2,11:13:33.08:355,33,0	1/1:8,24:31:66.15:701,66,0	1/1:0,12:12:36.09:386,36,0	1/1:0,10:10:30.07:321,30,0	1/1:0,9:9:21.05:225,21,0	1/1:3,19:22:60.15:644,60,0	1/1:3,12:14:30.07:322,30,0	1/1:1,17:18:51.13:547,51,0	1/1:0,10:10:30.08:322,30,0	1/1:1,21:22:48.12:516,48,0	1/1:0,7:7:12.03:129,12,0
chr10	48797225	.	AT	A	5090.42	PASS	AB=0.923;AC=27;AF=0.482;AN=56;BaseQRankSum=2.744;DP=497;FS=7.257;HRun=11;HaplotypeScore=80.0831;InbreedingCoeff=0.9262;MQ=70.82;MQ0=0;MQRankSum=0.213;QD=18.99;ReadPosRankSum=1.801;VQSLOD=5.8596;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:81.18:0,81,854	0/0:3,0:3:9.01:0,9,90	0/1:11,1:11:7.60:8,0,109	0/0:13,0:11:12.42:0,12,100	1/1:2,17:19:47.21:393,47,0	0/0:19,1:20:32.38:0,32,511	0/0:11,0:11:33.04:0,33,329	0/0:21,0:22:50.89:0,51,501	0/0:11,0:11:27.06:0,27,281	1/1:1,20:21:59.89:486,60,0	1/1:2,10:12:29.91:241,30,0	0/0:18,0:18:36.73:0,37,262	0/0:12,0:12:28.58:0,29,200	1/1:1,16:17:41.94:345,42,0	0/0:26,0:26:69.12:0,69,696	0/0:18,0:18:39.06:0,39,398	1/1:4,27:31:83.84:685,84,0	1/1:5,15:20:38.90:320,39,0	1/1:5,26:31:62.93:569,63,0	1/1:1,14:16:37.99:301,38,0	1/1:5,10:16:31.88:243,32,0	0/0:14,0:14:26.29:0,26,155	0/0:11,0:11:23.43:0,23,148	0/0:20,0:20:44.17:0,44,275	1/1:6,14:20:44.92:368,45,0	1/1:3,12:15:35.93:293,36,0	1/1:1,19:20:50.94:419,51,0	1/1:1,17:18:50.94:419,51,0
chr10	48797831	.	G	GGA	359.52	PASS	AB=0.975;AC=19;AF=0.365;AN=52;BaseQRankSum=0.016;DP=626;FS=31.151;HRun=0;HaplotypeScore=145.3207;InbreedingCoeff=0.4033;MQ=50.37;MQ0=26;MQRankSum=-0.187;QD=1.20;ReadPosRankSum=-0.859;VQSLOD=0.9022;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:33,7:41:25.13:25,0,77	0/0:7,0:6:2.99:0,3,25	./.	./.	0/1:13,0:13:0:0,0,0	0/0:15,0:14:2.46:0,2,11	0/0:24,0:24:29.16:0,29,236	1/1:23,0:20:8.45:47,8,0	0/1:22,0:24:18.15:18,0,167	0/1:20,0:19:0:0,0,0	0/1:10,0:9:0:0,0,0	1/1:31,0:31:14.97:124,15,0	1/1:27,0:28:10.65:57,11,0	0/0:23,0:22:13.04:0,13,64	0/0:26,0:26:14.65:0,15,106	0/0:21,0:22:15.64:0,16,136	0/0:18,0:18:8.56:0,9,42	0/0:13,0:13:7.24:0,7,32	0/1:26,0:24:7.63:8,0,8	0/0:11,0:11:0:0,0,0	0/1:22,0:22:0.17:0,0,0	0/0:25,0:25:0.29:0,0,0	1/1:16,0:16:5.81:46,6,0	1/1:33,0:32:20.93:173,21,0	0/0:15,0:14:1.39:0,1,4	0/0:22,0:22:2.34:0,2,12	0/0:20,0:19:2.49:0,2,6	1/1:10,0:9:0.47:1,0,0
chr10	48797867	.	AGAGAGG	A	2519.54	PASS	AB=1.000;AC=24;AF=0.429;AN=56;BaseQRankSum=6.852;DP=697;FS=3.429;HRun=0;HaplotypeScore=158.2743;InbreedingCoeff=0.7382;MQ=61.33;MQ0=24;MQRankSum=-2.500;QD=9.84;ReadPosRankSum=-0.303;VQSLOD=2.8565;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:39:57.38:0,57,1067	0/0:7,0:7:15.01:0,15,227	0/0:63,0:20:41.59:0,42,393	0/0:78,0:18:17.40:0,17,363	1/1:2,15:17:5.68:37,6,0	0/0:18,0:17:29.96:0,30,321	0/0:35,0:34:54.87:0,55,1146	0/1:28,0:28:99:382,0,173	0/0:17,0:17:41.73:0,42,793	0/1:24,0:24:7.93:191,0,8	0/0:9,0:9:0:0,0,1	0/0:24,0:24:38.90:0,39,575	0/0:30,0:30:63.30:0,63,737	1/1:12,12:23:15.05:340,15,0	0/0:23,0:23:51.08:0,51,764	0/0:23,0:23:8.76:0,9,768	1/1:9,11:19:9.03:189,9,0	1/1:6,7:13:9.03:206,9,0	1/1:16,1:16:26.92:266,27,0	1/1:1,10:11:2.92:53,3,0	1/1:32,0:32:36.34:366,36,0	0/0:20,0:20:26.98:0,27,295	0/0:23,0:22:47.77:0,48,460	0/0:30,0:30:51.08:0,51,846	1/1:4,18:22:5.95:85,6,0	1/1:18,0:18:35.73:287,36,0	1/1:3,14:16:6.02:133,6,0	1/1:13,0:12:23.91:189,24,0
chr10	48797869	.	AGAGG	A	2313.35	PASS	AB=0.750;AC=26;AF=0.464;AN=56;BaseQRankSum=7.327;DP=674;FS=1.462;HRun=0;HaplotypeScore=135.8499;InbreedingCoeff=0.8013;MQ=64.91;MQ0=22;MQRankSum=-5.138;QD=9.64;ReadPosRankSum=-0.502;VQSLOD=3.0019;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:64.69:0,65,913	0/0:7,0:7:15:0,15,181	0/0:66,0:23:48.82:0,49,469	0/0:79,0:19:18.15:0,18,365	1/1:16,0:16:5.69:37,6,0	0/0:18,0:17:7.10:0,7,189	0/0:33,0:32:45.65:0,46,880	0/1:30,0:30:15.57:458,0,16	0/0:17,0:17:15.88:0,16,522	1/1:23,0:23:35.71:310,36,0	0/1:0,8:8:0.03:0,0,0	0/0:24,0:24:38.90:0,39,475	0/0:31,0:31:63.37:0,63,673	1/1:20,0:19:15.04:176,15,0	0/0:23,0:23:51.05:0,51,613	0/0:22,0:22:38.14:0,38,590	1/1:15,0:14:9.03:109,9,0	1/1:10,1:11:9.03:108,9,0	1/1:13,0:12:27.01:252,27,0	1/1:11,0:11:3.01:36,3,0	1/1:30,0:30:47:402,47,0	0/0:21,0:21:29.64:0,30,300	0/0:26,0:25:51.70:0,52,454	0/0:30,0:30:48.04:0,48,637	1/1:20,0:20:5.95:52,6,0	1/1:3,13:16:36.39:325,36,0	1/1:17,0:15:6.02:68,6,0	1/1:10,0:10:23.92:189,24,0
chr10	48798509	.	A	ATG	25434.62	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-18.030;DP=820;FS=0.000;HRun=0;HaplotypeScore=85.5085;InbreedingCoeff=0.9985;MQ=93.95;MQ0=1;MQRankSum=-6.235;QD=47.54;ReadPosRankSum=1.720;VQSLOD=5.6294;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,132,1921	0/0:9,0:9:27.09:0,27,396	0/0:39,0:39:96.02:0,96,1353	0/0:34,0:34:85.53:0,86,1232	1/1:2,15:17:45.15:842,45,0	0/0:15,0:15:42.14:0,42,618	0/0:33,0:33:99:0,99,1437	1/1:2,30:34:93.29:1664,93,0	0/0:30,0:30:90.27:0,90,1294	1/1:4,18:24:60.19:1087,60,0	1/1:0,13:13:33.11:618,33,0	1/1:2,36:38:99:1854,99,0	1/1:1,25:26:78.27:1460,78,0	1/1:1,31:33:93.32:1733,93,0	0/0:40,0:40:99:0,114,1661	0/0:40,0:40:99:0,117,1722	1/1:4,28:33:63.22:1179,63,0	1/1:0,24:24:66.23:1236,66,0	1/1:3,12:15:39.12:700,39,0	1/1:0,15:14:33.11:618,33,0	1/1:6,61:68:99:3091,166,0	1/1:2,14:17:45.15:839,45,0	1/1:4,15:19:43.03:788,43,0	1/1:4,53:57:99:2753,148,0	1/1:2,21:23:57.67:1043,58,0	1/1:2,29:32:84.27:1516,84,0	1/1:1,38:39:99:2074,111,0	1/1:0,8:8:18.06:337,18,0
chr10	48798756	.	TA	T	2331.29	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=9.400;DP=560;FS=2.146;HRun=4;HaplotypeScore=59.1120;InbreedingCoeff=0.9216;MQ=65.22;MQ0=1;MQRankSum=0.991;QD=25.62;ReadPosRankSum=2.705;VQSLOD=2.5518;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:81.24:0,81,1083	0/0:15,0:15:42.13:0,42,557	0/0:5,0:5:10.84:0,11,59	0/0:4,0:3:0.68:0,1,37	0/0:28,0:28:81.25:0,81,1099	0/0:28,0:28:81.27:0,81,1117	0/0:9,0:9:21.07:0,21,289	0/0:40,0:39:99:0,105,1361	0/0:13,0:13:39.10:0,39,504	0/0:26,0:26:72.23:0,72,966	0/0:24,0:24:66.16:0,66,828	1/1:3,30:33:69.21:826,69,0	1/1:1,22:23:54.16:646,54,0	0/0:23,0:23:66.20:0,66,885	0/0:19,0:19:54.15:0,54,712	0/0:28,0:28:84.26:0,84,1127	0/0:26,0:26:72.11:0,72,931	0/0:29,0:29:84.21:0,84,1086	0/0:17,0:17:51.11:0,51,652	0/0:25,0:25:72.22:0,72,961	0/0:11,0:11:27.08:0,27,355	1/1:0,3:3:9.03:106,9,0	1/1:1,17:18:42.12:493,42,0	1/1:0,14:14:36.11:431,36,0	0/0:15,0:15:45.09:0,45,544	0/0:20,0:20:54.16:0,54,716	0/0:28,0:27:84.26:0,84,1138	0/0:7,0:7:21.06:0,21,273
chr10	48800766	.	T	TA	5404.15	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-12.679;DP=768;FS=0.000;HRun=1;HaplotypeScore=73.0719;InbreedingCoeff=0.9998;MQ=86.12;MQ0=0;MQRankSum=-2.945;QD=40.63;ReadPosRankSum=1.607;VQSLOD=5.3667;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,117,1518	0/0:15,0:15:45.15:0,45,584	0/0:24,0:25:70.80:0,71,858	0/0:32,0:32:90.29:0,90,1162	0/0:13,0:13:39.13:0,39,506	0/0:30,0:30:90.29:0,90,1167	0/0:29,0:29:81.26:0,81,1051	0/0:33,0:33:90.25:0,90,1149	0/0:33,0:33:96.31:0,96,1246	0/0:21,0:21:57.18:0,57,736	0/0:12,0:12:33.11:0,33,428	1/1:0,39:39:99:1619,108,0	1/1:0,22:22:63.21:944,63,0	0/0:27,0:27:78.21:0,78,980	0/0:48,0:48:99:0,138,1792	0/0:22,0:22:60.19:0,60,779	0/0:25,0:25:75.19:0,75,939	0/0:42,0:42:99:0,123,1526	0/0:37,0:37:99:0,108,1380	0/0:14,0:14:39.13:0,39,506	0/0:59,0:59:99:0,178,2283	1/1:0,29:29:78.22:1144,78,0	1/1:0,12:12:30.10:450,30,0	1/1:0,31:31:84.28:1248,84,0	0/0:19,0:19:57.19:0,57,740	0/0:27,0:27:78.25:0,78,1000	0/0:19,0:19:57.19:0,57,740	0/0:14,0:14:42.14:0,42,545
chr10	48801126	.	G	GT	14701.19	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-17.677;DP=815;FS=6.080;HRun=1;HaplotypeScore=72.9027;InbreedingCoeff=0.9999;MQ=87.32;MQ0=0;MQRankSum=-4.282;QD=41.65;ReadPosRankSum=5.184;VQSLOD=5.0592;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,166,2125	0/0:12,0:12:36.10:0,36,453	0/0:34,0:34:99:0,102,1260	0/0:20,0:20:54.17:0,54,679	1/1:0,12:12:36.05:512,36,0	0/0:30,0:30:90.29:0,90,1168	0/0:30,0:30:90.26:0,90,1138	0/0:33,0:33:93.27:0,93,1180	0/0:17,0:17:51.14:0,51,633	1/1:0,33:33:99:1443,99,0	1/1:0,21:21:57.11:804,57,0	0/0:39,0:39:99:0,111,1440	0/0:27,0:27:72.23:0,72,934	1/1:2,28:30:84.28:1256,84,0	0/0:40,0:40:99:0,114,1449	0/0:44,0:44:99:0,132,1713	1/1:1,31:32:90.30:1348,90,0	1/1:0,23:23:69.23:1034,69,0	1/1:2,20:22:60.17:859,60,0	1/1:1,21:22:63.17:918,63,0	1/1:2,76:78:99:3088,197,0	0/0:25,0:25:72.22:0,72,920	0/0:25,0:25:69.14:0,69,859	0/0:31,0:31:93.27:0,93,1177	1/1:0,23:23:66.22:989,66,0	1/1:0,27:27:81.26:1191,81,0	1/1:0,19:19:54.18:809,54,0	1/1:1,10:11:30.10:450,30,0
chr10	48801524	.	T	TG	1164.53	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-6.800;DP=563;FS=0.000;HRun=1;HaplotypeScore=54.2034;InbreedingCoeff=0.9982;MQ=79.44;MQ0=0;MQRankSum=-4.697;QD=37.57;ReadPosRankSum=-3.786;VQSLOD=2.4559;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:63.20:0,63,818	0/0:10,0:10:30.10:0,30,389	0/0:23,0:23:57.13:0,57,701	0/0:22,0:22:53.89:0,54,776	0/0:17,0:17:48.14:0,48,606	0/0:14,0:14:39.11:0,39,491	0/0:19,0:19:54.18:0,54,701	1/1:1,30:31:84.28:1259,84,0	0/0:25,0:25:72.23:0,72,931	0/0:18,0:18:48.16:0,48,623	0/0:13,0:13:39.13:0,39,506	0/0:23,0:23:69.19:0,69,866	0/0:25,0:25:72.23:0,72,935	0/0:17,0:17:51.16:0,51,656	0/0:17,0:17:48.16:0,48,623	0/0:26,0:25:78.25:0,78,1013	0/0:24,0:24:66.19:0,66,837	0/0:22,0:22:60.17:0,60,763	0/0:16,0:16:45.15:0,45,584	0/0:25,0:25:75.22:0,75,941	0/0:13,0:13:39.11:0,39,492	0/0:15,0:15:45.15:0,45,584	0/0:22,0:22:63.20:0,63,818	0/0:22,0:22:63.20:0,63,817	0/0:21,0:21:57.19:0,57,740	0/0:24,0:24:69.22:0,69,896	0/0:26,0:26:78.25:0,78,1013	0/0:9,0:9:27.09:0,27,351
chr10	48802841	.	G	GAATTAC	27917.37	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-4.805;DP=694;FS=0.917;HRun=0;HaplotypeScore=166.8983;InbreedingCoeff=0.9850;MQ=77.83;MQ0=0;MQRankSum=-20.047;QD=86.70;ReadPosRankSum=0.215;VQSLOD=6.0811;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:61,0:61:99:0,177,4059	0/0:7,0:7:21.05:0,21,464	0/0:16,0:16:36.11:0,36,752	0/0:27,0:27:76.82:0,77,1545	1/1:8,19:27:63.22:2068,63,0	0/0:11,0:11:30.10:0,30,739	0/0:24,0:24:69.24:0,69,1689	0/0:39,0:39:99:0,108,1753	0/0:15,0:15:45.15:0,45,1084	1/1:10,22:35:99:3343,99,0	1/1:8,19:28:75.25:2304,75,0	1/1:10,21:33:78.27:2695,78,0	1/1:4,15:20:54.19:1894,54,0	1/1:5,17:23:66.23:2386,66,0	0/0:30,0:30:81.28:0,81,1988	0/0:26,0:26:78.26:0,78,1808	1/1:5,16:23:51.18:1848,51,0	1/1:4,11:16:45.15:1592,45,0	0/0:21,0:21:56.48:0,56,924	0/0:25,0:25:75.03:0,75,1231	0/0:38,0:38:99:0,111,1910	1/1:5,15:20:54.18:1741,54,0	1/1:5,20:26:68.92:2173,69,0	1/1:4,14:21:36.12:1282,36,0	1/1:1,18:21:51.18:1842,51,0	1/1:2,20:27:78.23:2605,78,0	0/0:32,0:32:94.20:0,94,1620	1/1:1,1:2:6.02:143,6,0
chr10	48803004	.	GCA	G	2944.31	PASS	AB=0.948;AC=13;AF=0.232;AN=56;BaseQRankSum=16.590;DP=816;FS=1.134;HRun=0;HaplotypeScore=111.6689;InbreedingCoeff=0.7050;MQ=65.09;MQ0=1;MQRankSum=-0.555;QD=16.45;ReadPosRankSum=1.643;VQSLOD=3.8933;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,104,2249	0/1:10,1:11:7.76:8,0,419	0/0:18,0:13:15.04:0,15,202	0/0:17,0:12:17.38:0,17,293	0/0:34,2:36:26.86:0,27,1515	0/0:22,0:21:54.18:0,54,888	0/0:35,1:36:49.43:0,49,1336	0/0:25,0:25:45.15:0,45,741	0/0:23,0:23:66.23:0,66,1092	0/0:40,0:40:87.30:0,87,1445	0/0:23,1:24:19.33:0,19,860	1/1:23,0:23:36.06:505,36,0	1/1:20,0:20:51.06:509,51,0	0/0:32,2:34:2.65:0,3,1106	0/0:34,0:34:96.33:0,96,1582	0/0:38,1:39:64.48:0,64,1599	0/0:36,0:36:78.27:0,78,1297	0/0:26,0:26:69.24:0,69,1141	0/0:19,0:19:45.15:0,45,744	0/0:30,1:31:43.52:0,44,1259	0/0:52,1:53:99:0,104,2243	1/1:23,0:23:60:527,60,0	1/1:29,0:29:68.67:633,69,0	1/1:41,0:40:99:924,105,0	0/0:31,1:31:52.42:0,52,1383	0/1:23,2:25:3.48:3,0,1000	0/0:36,2:38:61.47:0,61,1554	0/1:7,0:7:15.52:16,0,278
chr10	48803017	.	CAT	C	5520.47	PASS	AB=0.909;AC=11;AF=0.196;AN=56;BaseQRankSum=14.917;DP=816;FS=1.113;HRun=0;HaplotypeScore=100.5908;InbreedingCoeff=0.8935;MQ=66.72;MQ0=1;MQRankSum=2.160;QD=38.88;ReadPosRankSum=3.245;VQSLOD=7.0788;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,135,2828	0/0:14,0:14:29:0,29,654	0/0:17,0:14:24.01:0,24,319	0/0:20,0:14:29.48:0,29,433	0/0:38,0:38:69.03:0,69,1961	0/0:24,0:23:69.14:0,69,1179	0/0:36,0:36:95.16:0,95,1814	0/0:29,0:29:84.14:0,84,1282	0/0:25,0:25:75.20:0,75,1375	0/0:34,0:34:99:0,102,1893	0/0:22,0:22:53.11:0,53,1181	1/1:0,21:21:57.19:914,57,0	1/1:0,20:20:54.10:822,54,0	0/0:30,0:30:43.41:0,43,1445	0/0:36,0:36:99:0,108,1997	0/0:39,0:39:99:0,104,2109	0/0:34,0:34:87.23:0,87,1669	0/0:26,0:26:78.19:0,78,1432	0/0:24,0:24:72.18:0,72,1163	0/0:28,0:28:68.30:0,68,1567	0/0:55,0:55:99:0,152,2906	1/1:1,22:23:60.20:960,60,0	1/1:0,28:28:68.87:1113,69,0	1/1:0,40:39:99:1700,105,0	0/0:30,0:30:77.20:0,77,1715	0/0:24,0:24:43.05:0,43,1269	0/0:38,0:38:91.28:0,91,1968	0/1:9,1:10:11.28:11,0,407
chr10	48803105	.	C	CT	4786.36	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=13.691;DP=652;FS=8.879;HRun=8;HaplotypeScore=93.0446;InbreedingCoeff=0.9385;MQ=74.26;MQ0=0;MQRankSum=-0.308;QD=20.28;ReadPosRankSum=-1.224;VQSLOD=3.7618;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:78.04:0,78,714	0/0:6,0:6:9:0,9,82	0/0:24,0:23:41.98:0,42,374	0/0:16,0:16:9.87:0,10,200	0/0:32,0:33:83.06:0,83,742	0/0:23,0:23:60.02:0,60,545	0/0:28,0:28:75:0,75,677	1/1:10,24:34:41.24:573,41,0	0/0:21,0:21:57.01:0,57,517	0/0:27,0:26:74.97:0,75,671	0/0:20,0:21:56.06:0,56,496	1/1:8,15:23:41.14:612,41,0	1/1:2,16:18:47.73:544,48,0	0/0:31,0:31:84.03:0,84,766	0/0:24,0:25:62.05:0,62,551	0/0:29,0:29:72.03:0,72,659	0/0:21,0:21:57.01:0,57,515	0/0:19,0:19:51.02:0,51,467	1/1:9,19:28:0.44:511,0,0	1/1:3,26:30:36.59:639,37,0	1/1:6,13:19:33.09:375,33,0	1/1:5,15:20:23.09:439,23,0	1/1:8,16:25:20.61:473,21,0	1/1:8,11:20:26.28:366,26,0	0/0:18,0:18:51.01:0,51,463	0/0:32,0:32:87.02:0,87,789	1/1:4,14:18:10.25:254,10,0	0/0:14,0:14:36.02:0,36,329
chr10	48803280	.	TA	T	5329.21	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=13.827;DP=615;FS=1.423;HRun=9;HaplotypeScore=68.4595;InbreedingCoeff=0.9842;MQ=76.40;MQ0=1;MQRankSum=0.968;QD=23.17;ReadPosRankSum=2.774;VQSLOD=5.7839;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:87.25:0,87,992	0/0:8,0:8:24.06:0,24,267	0/0:13,1:14:7.14:0,7,251	0/0:20,0:18:17.74:0,18,230	0/0:19,0:19:51.14:0,51,580	0/0:20,0:20:54.15:0,54,614	0/0:17,0:17:42.11:0,42,475	1/1:9,23:32:69:632,69,0	0/0:29,0:29:72.20:0,72,822	0/0:22,0:22:63.17:0,63,713	0/0:14,0:14:39.12:0,39,450	1/1:1,22:23:66.03:604,66,0	1/1:1,21:22:57.03:522,57,0	0/0:30,0:30:84.24:0,84,958	0/0:19,0:19:54.15:0,54,614	0/0:33,0:33:84.25:0,84,970	0/0:22,0:22:57.16:0,57,649	0/0:24,0:24:63.15:0,63,704	1/1:0,18:18:53.98:482,54,0	1/1:1,15:16:39.01:357,39,0	1/1:4,27:31:78.04:714,78,0	1/1:1,15:16:42.01:384,42,0	1/1:1,15:16:22.27:337,22,0	1/1:3,27:30:72.03:659,72,0	0/0:28,0:28:81.21:0,81,913	0/0:26,1:27:53.75:0,54,849	1/1:1,25:26:71.25:639,71,0	0/0:7,0:7:18.05:0,18,208
chr10	48803473	.	TAAA	T	4017.13	PASS	AB=0.545;AC=17;AF=0.304;AN=56;BaseQRankSum=2.155;DP=513;FS=0.000;HRun=16;HaplotypeScore=106.9208;InbreedingCoeff=0.8473;MQ=56.92;MQ0=2;MQRankSum=0.358;QD=19.13;ReadPosRankSum=5.251;VQSLOD=2.7494;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:29:66.09:0,66,927	0/0:5,0:6:15.05:0,15,251	0/0:6,0:2:0:0,0,0	0/0:4,0:3:3:0,3,26	1/1:6,23:34:45.50:550,45,0	0/0:19,0:20:51.13:0,51,770	0/0:6,0:9:19.26:0,19,263	0/0:27,0:28:50.44:0,50,688	0/0:18,0:18:39.12:0,39,633	1/1:5,18:25:42.87:514,43,0	1/1:3,17:22:24.92:431,25,0	0/0:7,0:19:14.70:0,15,66	0/0:2,0:15:9.97:0,10,22	0/1:3,15:18:1.41:297,0,1	0/0:16,0:17:45.06:0,45,653	0/0:14,0:15:36.06:0,36,547	1/1:5,19:24:47.94:516,48,0	1/1:4,19:23:38.84:420,39,0	0/0:18,0:16:31.31:0,31,411	0/0:20,0:25:63.63:0,64,999	0/0:10,0:10:21.01:0,21,273	0/0:3,0:10:2.96:0,3,7	0/0:8,1:14:8.24:0,8,30	0/0:2,0:11:10.46:0,10,39	1/1:0,14:14:36.09:387,36,0	1/1:11,21:33:45.56:634,46,0	0/0:25,0:26:69.11:0,69,1074	1/1:7,10:17:19.75:268,20,0
chr10	48805090	.	T	TA	11769.61	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-12.009;DP=617;FS=1.703;HRun=2;HaplotypeScore=64.6570;InbreedingCoeff=0.9847;MQ=85.61;MQ0=0;MQRankSum=-3.807;QD=38.97;ReadPosRankSum=2.485;VQSLOD=5.5077;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,105,1285	0/0:9,0:9:27.08:0,27,334	0/0:19,0:20:39.51:0,40,579	0/0:24,0:25:48.86:0,49,645	1/1:0,20:21:54.18:769,54,0	0/0:20,0:20:57.15:0,57,679	0/0:36,0:36:99:0,105,1302	1/1:0,24:24:72.20:1013,72,0	0/0:19,0:19:54.17:0,54,670	1/1:2,17:19:51.17:734,51,0	1/1:0,4:4:6.02:86,6,0	0/0:20,0:20:60.19:0,60,743	0/0:21,0:21:57.16:0,57,693	1/1:0,26:26:78.26:1123,78,0	0/0:19,0:19:57.18:0,57,706	0/0:21,0:21:63.19:0,63,768	1/1:0,52:52:99:2074,144,0	1/1:2,28:30:75.25:1080,75,0	1/1:3,14:17:45.15:644,45,0	1/1:1,10:11:30.06:409,30,0	1/1:1,30:31:87.29:1253,87,0	0/0:20,0:20:57.16:0,57,693	0/0:8,0:8:21.07:0,21,260	0/0:41,0:41:99:0,117,1428	1/1:0,16:16:45.15:648,45,0	1/1:0,14:15:45.15:641,45,0	1/1:1,22:23:66.22:950,66,0	1/1:0,13:13:24.08:346,24,0
chr10	48805797	.	TG	T	17669.07	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=17.619;DP=689;FS=2.468;HRun=1;HaplotypeScore=96.0424;InbreedingCoeff=0.9984;MQ=79.54;MQ0=0;MQRankSum=-5.836;QD=39.09;ReadPosRankSum=3.624;VQSLOD=5.3083;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,129,2030	0/0:9,0:9:27.09:0,27,432	0/0:23,0:23:48.14:0,48,986	0/0:14,0:14:36.12:0,36,540	1/1:0,21:21:57.19:797,57,0	0/0:32,0:32:96.31:0,96,1510	0/0:41,0:41:99:0,123,1874	1/1:0,28:28:81.20:1071,81,0	0/0:31,0:31:90.29:0,90,1411	1/1:0,26:26:78.24:1071,78,0	1/1:0,16:16:48.16:663,48,0	1/1:0,34:34:96.32:1342,96,0	1/1:0,24:24:69.23:965,69,0	1/1:1,26:27:78.25:1075,78,0	0/0:21,0:21:63.21:0,63,1007	0/0:23,0:23:69.22:0,69,1079	1/1:0,33:33:96.28:1319,96,0	1/1:1,33:34:90.30:1255,90,0	1/1:0,17:17:51.17:711,51,0	1/1:0,17:17:48.16:671,48,0	1/1:0,30:30:66.22:923,66,0	1/1:0,10:10:27.05:356,27,0	1/1:0,32:32:96.32:1342,96,0	1/1:0,27:27:75.25:1048,75,0	1/1:0,16:16:45.15:629,45,0	1/1:0,30:30:90.30:1259,90,0	1/1:0,24:24:66.22:922,66,0	1/1:0,6:6:18.06:252,18,0
chr10	48805896	.	C	CTGTGTGTG	9385.63	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=0.147;DP=577;FS=9.972;HRun=0;HaplotypeScore=187.4255;InbreedingCoeff=0.8425;MQ=63.57;MQ0=2;MQRankSum=-9.280;QD=33.28;ReadPosRankSum=-4.454;VQSLOD=2.6942;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,117,2812	0/0:13,0:13:30.10:0,30,705	0/0:16,0:14:1.36:0,1,38	0/1:20,0:16:3.49:3,0,100	1/1:18,2:20:4.55:89,5,0	0/0:22,0:22:45.15:0,45,1095	0/0:38,0:38:66.22:0,66,1658	1/1:18,6:25:42.14:941,42,0	0/0:21,0:21:60.18:0,60,1484	1/1:10,3:11:24.08:775,24,0	1/1:20,3:23:18.42:500,18,0	0/0:29,0:29:57.15:0,57,1275	0/0:16,0:15:27.09:0,27,623	1/1:13,5:18:15.05:376,15,0	0/0:19,0:19:51.15:0,51,1195	0/0:17,0:17:39.13:0,39,977	1/1:24,2:25:47.52:1397,48,0	1/1:24,7:32:57.10:1728,57,0	1/1:15,2:16:36.12:992,36,0	1/1:10,0:10:5.89:147,6,0	1/1:18,0:18:6.02:172,6,0	0/0:20,0:20:33.11:0,33,798	0/0:18,0:18:27.08:0,27,550	0/0:15,0:17:17.70:0,18,377	1/1:20,1:19:18.05:444,18,0	1/1:18,5:22:42.08:1116,42,0	1/1:12,1:13:21.07:628,21,0	1/1:2,0:2:3.01:78,3,0
chr10	48805911	.	T	TGTGTGTGTGC	10883.38	PASS	AB=0.933;AC=29;AF=0.518;AN=56;BaseQRankSum=-0.007;DP=566;FS=4.018;HRun=0;HaplotypeScore=202.5385;InbreedingCoeff=0.8268;MQ=57.75;MQ0=2;MQRankSum=-9.926;QD=40.01;ReadPosRankSum=-3.983;VQSLOD=3.7309;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:51:99:0,150,3747	0/0:11,0:11:33.10:0,33,825	0/0:9,0:7:0.90:0,1,38	0/1:13,0:10:15.98:16,0,98	1/1:12,0:14:8.84:128,9,0	0/0:21,0:21:60.12:0,60,1482	0/0:41,0:41:99:0,110,2435	1/1:24,0:24:36.70:731,37,0	0/0:23,0:23:63.18:0,63,1781	1/1:13,0:12:32.67:787,33,0	1/1:18,0:21:17.32:540,17,0	0/0:27,0:27:60.16:0,60,1435	0/0:16,0:14:32.76:0,33,728	1/1:17,0:18:15.05:402,15,0	0/0:18,0:18:54.14:0,54,1519	0/0:23,0:23:60.08:0,60,1418	1/1:22,7:28:77.52:2581,78,0	1/1:22,6:29:71.70:1993,72,0	1/1:14,0:15:40.52:1055,41,0	1/1:14,0:15:4.71:144,5,0	1/1:23,0:23:5.52:171,6,0	0/0:22,0:22:33.11:0,33,896	0/0:13,0:13:27.08:0,27,578	0/0:18,0:18:23.72:0,24,606	1/1:13,0:13:18.05:504,18,0	1/1:24,0:23:54.77:1145,55,0	1/1:8,0:12:21.32:608,21,0	1/1:3,0:3:3.01:78,3,0
chr10	48805927	.	CGT	C	2308.15	PASS	AB=0.921;AC=30;AF=0.536;AN=56;BaseQRankSum=8.690;DP=554;FS=10.885;HRun=0;HaplotypeScore=150.9544;InbreedingCoeff=0.2659;MQ=61.93;MQ0=1;MQRankSum=0.047;QD=6.67;ReadPosRankSum=-5.935;VQSLOD=0.6414;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,128,2311	0/0:15,0:15:39.01:0,39,504	0/1:7,0:6:4.67:5,0,19	0/0:9,0:8:12.38:0,12,92	1/1:10,2:12:0.84:48,1,0	0/0:20,0:20:51.15:0,51,831	0/0:42,0:42:99:0,120,1935	0/1:19,0:19:38.04:141,0,38	0/0:24,0:24:69.12:0,69,999	0/1:18,4:20:39.94:197,0,40	0/1:18,3:21:15.02:42,0,15	1/1:14,4:18:41.69:308,42,0	1/1:16,1:15:37.90:273,38,0	1/1:10,5:15:9.62:116,10,0	0/0:25,0:25:75.10:0,75,1056	0/0:24,0:24:66.17:0,66,1049	0/1:24,4:27:44.34:86,0,44	0/1:28,4:32:99:147,0,107	0/1:11,2:13:23.94:91,0,24	1/1:13,1:14:2.71:72,3,0	1/1:16,5:21:17.76:132,18,0	1/1:16,5:21:38.09:294,38,0	1/1:8,2:10:13.66:98,14,0	1/1:14,4:18:23.69:184,24,0	0/1:11,1:10:5.87:53,0,6	0/1:27,2:28:10.71:188,0,11	0/1:16,0:15:0.11:0,0,37	1/1:1,0:1:2.97:20,3,0
chr10	48805977	.	A	AG	14907.88	PASS	AB=0.929;AC=39;AF=0.696;AN=56;BaseQRankSum=3.592;DP=608;FS=4.116;HRun=1;HaplotypeScore=90.8654;InbreedingCoeff=0.9328;MQ=85.74;MQ0=0;MQRankSum=-3.818;QD=39.13;ReadPosRankSum=2.833;VQSLOD=5.4517;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,132,1695	0/1:12,1:13:5.83:6,0,427	0/0:22,0:22:57.18:0,57,727	0/0:21,0:21:57.93:0,58,686	1/1:0,20:20:57.19:853,57,0	0/0:21,0:21:60.19:0,60,778	0/0:45,0:45:99:0,120,1554	1/1:0,22:22:66.22:985,66,0	0/0:22,0:22:66.21:0,66,857	1/1:3,19:22:66.21:967,66,0	1/1:0,8:8:24.08:359,24,0	1/1:0,26:26:75.25:1123,75,0	1/1:0,21:21:57.19:852,57,0	1/1:1,11:12:36.12:530,36,0	0/0:23,0:23:69.22:0,69,895	0/0:27,0:27:78.25:0,78,1013	1/1:6,24:29:81.27:1206,81,0	1/1:4,28:32:81.21:1186,81,0	1/1:3,14:17:45.11:639,45,0	1/1:0,11:11:32.98:439,33,0	1/1:0,30:30:78.26:1161,78,0	1/1:0,17:17:48.16:719,48,0	1/1:0,16:16:38.94:582,39,0	1/1:1,23:24:48.16:718,48,0	1/1:0,9:9:27.09:405,27,0	1/1:1,22:23:69.19:1009,69,0	1/1:0,19:19:51.17:763,51,0	1/1:0,9:9:27.09:404,27,0
chr10	48806070	.	TG	T	5985.40	PASS	AB=0.792;AC=38;AF=0.679;AN=56;BaseQRankSum=8.705;DP=551;FS=2.177;HRun=10;HaplotypeScore=63.9955;InbreedingCoeff=0.8798;MQ=69.09;MQ0=2;MQRankSum=-0.037;QD=17.10;ReadPosRankSum=0.053;VQSLOD=5.2128;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:92.24:0,92,983	0/0:7,0:8:14.87:0,15,147	0/0:38,0:21:9.62:0,10,162	0/1:25,0:16:4.16:4,0,59	1/1:2,20:22:43.85:429,44,0	0/0:20,2:22:26.42:0,26,472	0/0:20,0:20:51.09:0,51,536	1/1:7,16:23:47.86:396,48,0	0/0:19,0:19:45.07:0,45,469	1/1:4,7:11:26.97:231,27,0	1/1:3,8:11:23.17:171,23,0	1/1:8,10:18:35.95:306,36,0	1/1:6,12:17:38.98:337,39,0	1/1:1,13:14:23.99:208,24,0	0/0:31,1:33:70.02:0,70,954	0/0:23,0:23:63.14:0,63,680	1/1:12,26:37:92.85:785,93,0	1/1:3,12:15:41.97:358,42,0	1/1:4,6:10:20.99:182,21,0	1/1:3,8:11:23.99:208,24,0	1/1:5,17:22:53.97:465,54,0	1/1:2,12:14:29.90:250,30,0	1/1:7,10:17:32.96:281,33,0	1/1:8,16:24:56.90:484,57,0	0/1:6,15:21:1.11:270,0,1	1/1:8,6:14:22.49:211,22,0	1/1:5,6:11:23.97:203,24,0	1/1:4,7:11:23.98:205,24,0
chr10	48806515	.	T	TGC	2293.42	PASS	AB=1.000;AC=18;AF=0.321;AN=56;BaseQRankSum=1.358;DP=744;FS=16.658;HRun=0;HaplotypeScore=203.2950;InbreedingCoeff=0.3319;MQ=62.74;MQ0=7;MQRankSum=-7.167;QD=6.25;ReadPosRankSum=-7.181;VQSLOD=0.3478;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,129,1803	0/0:15,0:15:42.12:0,42,618	0/0:41,0:30:81.10:0,81,1013	0/0:35,0:31:66.02:0,66,917	0/1:22,0:22:5.99:6,0,184	0/0:24,0:23:66.07:0,66,849	0/0:31,0:31:76.08:0,76,1139	0/1:38,0:38:99:148,0,373	0/0:26,0:26:75.10:0,75,969	0/1:23,0:23:42.17:42,0,243	0/1:14,0:14:6.46:6,0,91	1/1:17,20:36:59.68:732,60,0	1/1:9,16:25:23.92:496,24,0	0/1:24,0:23:13.12:13,0,232	0/0:33,0:33:99:0,99,1289	0/0:13,0:13:39.11:0,39,552	0/0:23,0:23:7.87:0,8,230	0/0:25,0:25:6.37:0,6,228	0/1:17,0:17:13.23:13,0,199	0/0:20,0:20:3.67:0,4,190	0/1:71,0:70:41.11:41,0,482	1/1:12,9:21:35.74:346,36,0	1/1:9,7:16:20.78:207,21,0	1/1:17,11:28:35.36:364,35,0	0/0:21,0:21:30.36:0,30,266	0/1:31,0:31:62.47:62,0,220	0/0:14,0:14:17.07:0,17,211	0/0:10,0:10:17.36:0,17,98
chr10	48806518	.	G	GCC	1979.36	PASS	AB=0.680;AC=5;AF=0.089;AN=56;BaseQRankSum=4.838;DP=747;FS=17.358;HRun=0;HaplotypeScore=219.2106;InbreedingCoeff=0.0622;MQ=59.57;MQ0=9;MQRankSum=-8.857;QD=14.04;ReadPosRankSum=1.009;VQSLOD=2.1693;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,126,2005	0/0:15,0:15:45.15:0,45,723	0/0:41,0:29:75.28:0,75,1280	0/0:35,0:30:66.66:0,67,1142	0/0:20,0:20:41.60:0,42,467	0/0:24,0:23:66.15:0,66,985	0/0:32,0:32:76.17:0,76,1312	0/0:38,0:38:71.57:0,72,857	0/0:23,0:23:69.22:0,69,1079	0/0:23,0:23:56.01:0,56,593	0/0:13,0:13:17.64:0,18,215	0/1:19,24:42:79.39:683,0,79	0/1:9,16:25:11.47:521,0,11	0/0:25,0:24:29.52:0,30,561	0/0:33,0:33:99:0,99,1513	0/0:12,0:12:36.12:0,36,584	0/0:22,0:22:57.33:0,57,617	0/0:24,0:24:49.02:0,49,492	0/0:18,0:18:37.91:0,38,356	0/0:20,0:20:26.19:0,26,371	0/0:68,0:67:83.08:0,83,1181	0/1:12,9:22:24.28:304,0,24	0/1:13,7:20:2.77:220,0,3	0/1:19,12:31:24.28:369,0,24	0/0:23,0:23:49.70:0,50,587	0/0:30,0:30:60.48:0,60,566	0/0:14,0:14:35.40:0,35,390	0/0:7,0:7:16.60:0,17,185
chr10	48806967	.	A	ACCCCTCAGGCACGATGCAG	14615.85	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-1.806;DP=832;FS=0.944;HRun=0;HaplotypeScore=399.9820;InbreedingCoeff=0.8905;MQ=78.73;MQ0=0;MQRankSum=-10.939;QD=34.07;ReadPosRankSum=-7.412;VQSLOD=1.4905;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:75.23:0,75,3141	0/0:12,0:12:21.96:0,22,963	0/0:24,0:24:14.97:0,15,202	0/0:25,0:25:14:0,14,444	1/1:20,3:31:6.02:495,6,0	0/0:15,0:15:33.11:0,33,1423	0/0:25,0:25:36.07:0,36,1531	1/1:33,0:33:52.37:2162,52,0	0/0:32,0:32:69.22:0,69,3172	1/1:24,1:38:24.01:956,24,0	1/1:20,0:20:9.03:706,9,0	0/0:40,0:40:96.29:0,96,4078	0/0:35,0:35:66.23:0,66,3009	1/1:16,4:41:11.74:1051,12,0	0/0:38,0:38:84.27:0,84,3869	0/0:30,0:30:51.15:0,51,2271	1/1:26,5:40:18.06:1544,18,0	1/1:20,5:31:21.07:1713,21,0	1/1:29,0:29:32.96:939,33,0	1/1:15,1:20:3.01:266,3,0	1/1:56,0:56:38.26:1131,38,0	0/0:30,0:30:63.21:0,63,2891	0/0:24,0:24:33.11:0,33,1565	0/0:32,0:32:66.14:0,66,2625	1/1:15,3:23:6.02:532,6,0	1/1:33,1:34:30.10:2322,30,0	1/1:16,3:30:6.49:532,6,0	1/1:3,0:3:3.01:266,3,0
chr10	48808056	.	AC	A	9818.32	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=10.010;DP=611;FS=1.894;HRun=8;HaplotypeScore=64.3254;InbreedingCoeff=0.9901;MQ=82.76;MQ0=0;MQRankSum=-4.005;QD=24.42;ReadPosRankSum=3.131;VQSLOD=5.6856;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,117,1379	0/0:5,0:5:12.04:0,12,145	0/0:20,0:20:39.10:0,39,459	0/0:18,0:19:37.81:0,38,406	1/1:0,5:5:12.02:116,12,0	0/0:30,0:30:84.23:0,84,991	0/0:29,0:29:78.22:0,78,928	1/1:7,18:25:54.06:515,54,0	0/0:18,0:18:54.17:0,54,652	1/1:5,16:21:54.05:512,54,0	1/1:0,18:18:48.08:463,48,0	1/1:5,24:29:72.11:695,72,0	1/1:3,13:16:36.06:347,36,0	1/1:3,30:33:78.12:753,78,0	0/0:31,0:31:84.25:0,84,1000	0/0:13,0:13:36.11:0,36,435	1/1:1,35:36:99:1014,105,0	1/1:1,18:19:54.09:521,54,0	1/1:2,12:14:36.02:340,36,0	1/1:1,18:19:42.06:406,42,0	1/1:2,31:33:84.13:811,84,0	1/1:3,16:19:51.08:492,51,0	1/1:4,9:13:30.05:289,30,0	1/1:6,15:21:48.07:463,48,0	1/1:3,21:24:63.10:608,63,0	1/1:1,21:22:60.10:579,60,0	1/1:3,20:23:60.09:579,60,0	1/1:2,10:12:33.05:316,33,0
chr10	48808726	.	CGTGCTGGCCTTGGAGGGGCTGTT	C	34284.87	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=18.081;DP=590;FS=3.467;HRun=0;HaplotypeScore=371.6555;InbreedingCoeff=0.9455;MQ=85.03;MQ0=0;MQRankSum=-16.358;QD=104.85;ReadPosRankSum=3.558;VQSLOD=3.9289;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,132,12949	0/0:16,0:16:48.16:0,48,4468	0/0:26,0:26:56.96:0,57,3387	0/0:22,0:23:44.32:0,44,4070	1/1:2,10:12:21.07:815,21,0	0/0:24,0:24:72.25:0,72,7363	0/0:42,0:42:99:0,126,11982	1/1:11,2:13:6.02:236,6,0	0/0:26,0:26:78.25:0,78,7204	1/1:2,17:19:51.18:2940,51,0	1/1:1,7:8:15.05:663,15,0	1/1:1,26:27:69.24:4320,69,0	1/1:4,11:15:33.11:2118,33,0	1/1:5,25:30:60.21:3851,60,0	0/0:29,0:29:87.30:0,87,8779	0/0:32,0:32:96.33:0,96,9533	1/1:4,14:18:33.11:1850,33,0	1/1:5,6:11:18.06:893,18,0	1/1:7,6:13:18.03:914,18,0	1/1:4,13:17:39.13:2195,39,0	1/1:21,14:35:21.07:1138,21,0	1/1:5,13:18:39.13:2310,39,0	1/1:1,5:6:12.04:330,12,0	1/1:5,12:17:24.08:1435,24,0	1/1:8,9:17:24.08:1530,24,0	1/1:6,23:29:69.24:4156,69,0	1/1:4,15:19:39.13:2398,39,0	1/1:0,3:3:3.01:193,3,0
chr10	48809219	.	TG	T	7772.23	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=8.341;DP=500;FS=8.900;HRun=9;HaplotypeScore=53.9754;InbreedingCoeff=0.9881;MQ=74.29;MQ0=0;MQRankSum=-3.851;QD=22.21;ReadPosRankSum=2.466;VQSLOD=5.5298;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:75.05:0,75,821	0/0:3,0:3:9.03:0,9,104	0/0:19,0:19:32.34:0,32,346	0/0:8,0:9:23.38:0,23,177	1/1:3,15:18:39.02:357,39,0	0/0:24,0:24:57.17:0,57,656	0/0:17,0:17:48.14:0,48,552	1/1:4,24:28:68.93:607,69,0	0/0:14,0:14:30.09:0,30,346	1/1:6,17:23:48.01:439,48,0	1/1:2,12:14:33.02:302,33,0	1/1:3,19:22:54.03:494,54,0	1/1:2,8:10:24.01:220,24,0	1/1:3,20:23:60.03:549,60,0	0/0:18,0:18:51.14:0,51,578	0/0:15,0:15:39.10:0,39,440	1/1:4,22:26:63.02:577,63,0	1/1:2,28:30:81.04:741,81,0	1/1:2,18:20:50.99:458,51,0	1/1:2,10:12:27:243,27,0	1/1:3,19:22:48.02:439,48,0	1/1:3,6:9:21:189,21,0	1/1:0,7:7:21.01:192,21,0	1/1:2,12:14:33.02:302,33,0	1/1:3,15:18:42.02:383,42,0	1/1:2,17:19:50.99:457,51,0	1/1:3,24:27:66:603,66,0	1/1:0,8:8:24.01:220,24,0
chr10	48809664	.	A	AAAAC	7512.19	PASS	AB=0.593;AC=27;AF=0.482;AN=56;BaseQRankSum=11.522;DP=562;FS=5.287;HRun=0;HaplotypeScore=126.5067;InbreedingCoeff=0.9279;MQ=58.10;MQ0=3;MQRankSum=-8.902;QD=29.69;ReadPosRankSum=-3.413;VQSLOD=4.0231;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:66.23:0,66,1069	0/0:5,0:5:15.01:0,15,216	0/0:34,0:30:42.10:0,42,581	0/0:39,0:29:30.56:0,31,417	1/1:9,2:10:21:379,21,0	0/0:26,0:26:63.20:0,63,1004	0/0:26,0:26:48.05:0,48,682	1/1:27,0:27:47.74:857,48,0	0/0:15,0:15:33.08:0,33,490	1/1:16,1:17:36.11:738,36,0	1/1:8,10:18:24.08:574,24,0	0/0:19,0:19:39.12:0,39,606	0/0:12,0:12:21.05:0,21,318	1/1:11,1:12:21.07:478,21,0	0/0:22,0:22:51.16:0,51,808	0/0:16,0:16:39.13:0,39,636	1/1:11,17:28:14.10:412,14,0	1/1:15,10:25:21.07:409,21,0	1/1:16,1:16:27.07:443,27,0	1/1:14,1:12:26.99:478,27,0	1/1:13,0:11:7.68:166,8,0	0/0:16,0:16:27.09:0,27,435	0/0:20,0:20:39.13:0,39,633	0/0:29,0:29:81.23:0,81,1263	1/1:9,0:9:24.08:439,24,0	1/1:20,5:25:48.14:973,48,0	0/1:10,21:31:0.82:1021,0,1	1/1:4,0:4:6.02:146,6,0
chr10	48809688	.	CCA	C	2122.30	PASS	AB=0.743;AC=14;AF=0.250;AN=56;BaseQRankSum=7.171;DP=565;FS=19.754;HRun=0;HaplotypeScore=127.2441;InbreedingCoeff=-0.3314;MQ=52.16;MQ0=9;MQRankSum=-4.402;QD=8.16;ReadPosRankSum=-2.047;VQSLOD=1.4510;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:75.26:0,75,1504	0/0:8,0:8:24.04:0,24,427	0/0:45,0:26:65.47:0,65,1282	0/0:42,0:26:67.81:0,68,1244	0/1:5,5:9:79.63:80,0,151	0/0:25,0:25:72.23:0,72,1424	0/0:24,0:24:69.15:0,69,1243	0/1:19,15:33:99:482,0,484	0/0:13,0:13:36.56:0,37,651	0/1:6,10:16:99:257,0,217	0/1:14,1:15:99:129,0,193	0/0:14,0:14:42.13:0,42,794	0/0:11,0:11:33.10:0,33,622	0/1:6,6:12:99:105,0,223	0/0:19,0:19:57.18:0,57,1119	0/0:16,0:16:48.16:0,48,951	0/1:30,1:30:12.80:13,0,458	0/1:22,2:24:58.74:59,0,530	0/1:12,8:19:99:247,0,368	0/1:3,12:12:24.80:241,0,25	0/1:9,5:12:56.25:56,0,256	0/0:13,0:13:39.13:0,39,772	0/0:16,0:16:45.09:0,45,884	0/0:34,0:33:94.64:0,95,1836	0/1:9,5:14:99:217,0,341	0/1:11,10:21:99:297,0,269	0/1:25,3:27:64.23:64,0,171	0/1:2,4:6:30.96:31,0,49
chr10	48809707	.	C	CA	1566.95	PASS	AB=0.764;AC=14;AF=0.250;AN=56;BaseQRankSum=11.072;DP=546;FS=10.224;HRun=1;HaplotypeScore=128.9669;InbreedingCoeff=-0.2844;MQ=52.96;MQ0=8;MQRankSum=-5.845;QD=6.27;ReadPosRankSum=7.283;VQSLOD=-0.2681;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:66.19:0,66,840	0/0:8,0:8:15.05:0,15,192	0/0:42,0:21:61.43:0,61,751	0/0:34,0:23:55.36:0,55,659	0/1:4,4:7:14.70:63,0,15	0/0:22,0:22:66.19:0,66,828	0/0:22,0:22:54.18:0,54,700	0/1:27,6:32:96.34:96,0,100	0/0:15,0:15:35.98:0,36,432	0/1:12,4:16:70.69:71,0,136	0/1:14,3:17:10.46:10,0,85	0/0:14,0:14:39.59:0,40,471	0/0:14,0:14:36.11:0,36,437	0/1:9,6:15:68.13:129,0,68	0/0:19,0:19:51.09:0,51,612	0/0:16,0:16:48.16:0,48,622	0/1:17,6:20:15.90:244,0,16	0/1:15,9:24:43.63:234,0,44	0/1:15,5:20:99:122,0,144	0/1:10,2:9:30.67:40,0,31	0/1:11,3:12:39.07:39,0,59	0/0:12,0:12:33.07:0,33,397	0/0:18,0:18:42.12:0,42,497	0/0:34,0:33:92.59:0,93,1108	0/1:6,6:12:7.90:187,0,8	0/1:13,11:24:46.50:236,0,46	0/1:16,10:25:99:216,0,103	0/1:4,2:6:9.33:35,0,9
chr10	48809709	.	C	CAA	3539.50	PASS	AB=0.765;AC=15;AF=0.268;AN=56;BaseQRankSum=10.681;DP=544;FS=12.991;HRun=1;HaplotypeScore=132.3793;InbreedingCoeff=-0.1861;MQ=55.14;MQ0=7;MQRankSum=-6.634;QD=14.21;ReadPosRankSum=2.941;VQSLOD=-0.3561;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:63.22:0,63,1026	0/0:7,0:7:21:0,21,282	0/0:42,0:23:64.61:0,65,959	0/0:33,0:23:59.18:0,59,802	0/1:5,4:8:29.20:131,0,29	0/0:22,0:22:66.21:0,66,1049	0/0:21,0:21:54.18:0,54,878	0/1:28,6:33:91.59:243,0,92	0/0:16,0:16:39.10:0,39,582	0/1:12,4:16:99:186,0,162	0/1:14,3:17:24.82:225,0,25	0/0:14,0:14:38.81:0,39,619	0/0:16,0:16:39.12:0,39,631	0/1:8,6:14:45.34:246,0,45	0/0:19,0:19:57.16:0,57,874	0/0:16,0:16:48.16:0,48,759	0/1:17,6:19:38.90:393,0,39	0/1:13,9:22:28.74:366,0,29	0/1:14,5:19:99:169,0,226	0/1:10,2:10:21.32:161,0,21	0/1:13,3:14:65.78:173,0,66	0/0:10,0:10:30.09:0,30,462	0/0:18,0:18:42.07:0,42,617	0/0:34,0:33:90.15:0,90,1392	0/1:5,6:11:38.47:269,0,38	0/1:12,11:23:24.15:438,0,24	0/1:17,10:26:46.22:399,0,46	1/1:4,2:6:14.94:140,15,0
chr10	48809712	.	C	CAA	4318.77	PASS	AB=1.000;AC=20;AF=0.357;AN=56;BaseQRankSum=10.586;DP=555;FS=7.084;HRun=1;HaplotypeScore=132.9414;InbreedingCoeff=0.2676;MQ=64.05;MQ0=6;MQRankSum=-5.670;QD=16.36;ReadPosRankSum=0.287;VQSLOD=1.8983;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:63.20:0,63,976	0/0:7,0:7:21.07:0,21,321	0/0:44,0:28:62.53:0,63,1026	0/0:33,0:25:56.22:0,56,728	0/1:9,0:8:5.99:148,0,6	0/0:21,0:21:63.21:0,63,1021	0/0:26,0:26:63.17:0,63,917	0/1:34,0:33:8.44:329,0,8	0/0:16,0:16:42.10:0,42,596	0/1:16,0:16:87.06:233,0,87	1/1:12,5:17:27.38:423,27,0	0/0:15,0:15:37.21:0,37,209	0/1:16,0:16:32:32,0,167	0/1:14,0:14:18.74:280,0,19	0/0:22,0:22:60.20:0,60,950	0/0:16,0:16:45.15:0,45,727	1/1:24,0:20:11.55:411,12,0	0/1:20,0:20:27.36:381,0,27	0/1:20,0:20:94.38:218,0,94	0/1:10,0:10:10.08:200,0,10	0/1:16,0:14:1.12:260,0,1	0/0:10,0:10:29.38:0,29,192	0/0:20,0:20:40.71:0,41,239	0/0:35,0:34:39.83:0,40,476	0/1:11,0:11:14.18:300,0,14	1/1:24,0:24:14.94:496,15,0	1/1:26,0:25:3.60:440,4,0	1/1:7,0:7:19.49:170,19,0
chr10	48809992	.	AAAAGAAAG	A	3800.69	PASS	AB=0.905;AC=22;AF=0.393;AN=56;BaseQRankSum=2.234;DP=504;FS=33.676;HRun=0;HaplotypeScore=188.8844;InbreedingCoeff=0.6800;MQ=72.29;MQ0=3;MQRankSum=-4.763;QD=18.10;ReadPosRankSum=0.148;VQSLOD=1.1265;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:42.13:0,42,1416	0/0:15,0:15:33.10:0,33,1040	0/0:27,0:20:32.24:0,32,784	0/1:20,0:15:46.21:46,0,386	1/1:1,13:14:14.85:127,15,0	0/0:18,0:18:45.14:0,45,1423	0/0:21,0:21:57.18:0,57,1731	0/0:21,0:21:26.53:0,27,216	0/0:21,0:21:51.18:0,51,1628	1/1:16,0:16:36.06:423,36,0	1/1:10,0:10:24.01:313,24,0	0/0:12,0:12:27.15:0,27,406	0/0:18,0:19:40.01:0,40,565	1/1:11,3:14:36.11:593,36,0	0/0:22,0:22:48.14:0,48,1379	0/0:22,0:22:48.15:0,48,1464	1/1:11,0:11:23.80:312,24,0	1/1:17,1:18:40.02:497,40,0	0/1:19,0:21:24.29:24,0,277	0/1:17,0:18:99:112,0,202	0/0:8,0:9:9.03:0,9,113	0/0:25,0:25:46.88:0,47,501	0/0:21,0:21:29.06:0,29,511	0/0:17,0:16:24.98:0,25,333	1/1:9,1:10:27.03:378,27,0	1/1:13,6:19:50.86:787,51,0	0/1:28,0:33:99:117,0,374	1/1:3,0:3:8.98:73,9,0
chr10	48810014	.	AAGAG	A	6019.53	PASS	AB=0.985;AC=38;AF=0.704;AN=54;BaseQRankSum=5.214;DP=464;FS=13.459;HRun=0;HaplotypeScore=156.9284;InbreedingCoeff=-0.1211;MQ=51.91;MQ0=8;MQRankSum=-4.248;QD=13.53;ReadPosRankSum=0.050;VQSLOD=3.9828;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:26:73.06:205,0,73	0/1:16,0:16:99:107,0,99	0/0:11,0:6:14.89:0,15,142	0/0:7,0:6:3.73:0,4,62	1/1:13,0:13:5.89:37,6,0	0/1:25,0:25:99:203,0,113	0/1:22,0:22:23.46:23,0,244	1/1:27,0:24:50.18:386,50,0	0/1:21,0:21:99:121,0,149	1/1:11,0:11:21.32:159,21,0	1/1:9,0:8:21.74:162,22,0	0/1:8,1:9:35.44:81,0,35	0/1:23,0:23:53.10:456,0,53	1/1:11,3:14:35.58:327,36,0	0/1:19,0:19:36.08:189,0,36	0/1:16,0:16:71.93:72,0,182	1/1:12,0:12:26.50:191,26,0	1/1:17,1:18:31.20:289,31,0	1/1:22,4:23:20.77:429,21,0	1/1:12,6:15:17.04:313,17,0	1/1:6,2:8:12.75:147,13,0	0/1:21,2:23:16.18:475,0,16	0/1:14,0:14:49.97:158,0,50	0/1:18,0:17:47.12:182,0,47	1/1:11,1:12:32.50:239,33,0	1/1:8,6:14:30.88:360,31,0	1/1:20,11:31:59.43:707,59,0	./.
chr10	48810016	.	GAGA	G	395.46	PASS	AB=0.970;AC=13;AF=0.241;AN=54;BaseQRankSum=7.808;DP=461;FS=3.885;HRun=0;HaplotypeScore=167.8238;InbreedingCoeff=-0.1117;MQ=51.98;MQ0=8;MQRankSum=-3.504;QD=2.08;ReadPosRankSum=1.124;VQSLOD=2.5818;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:46.92:0,47,488	0/0:15,0:15:34.82:0,35,419	0/0:11,0:6:15.94:0,16,333	0/0:8,0:5:12.62:0,13,157	1/1:13,0:13:0.94:1,1,0	0/0:25,0:25:52.60:0,53,612	0/0:21,0:21:47.83:0,48,802	0/0:26,0:23:60.83:0,61,390	0/0:22,0:22:18.89:0,19,571	0/1:10,0:10:0.47:25,0,0	0/1:7,1:7:12.96:31,0,13	0/0:9,0:9:16.34:0,16,110	0/1:23,1:24:59.01:59,0,214	0/1:15,0:15:23.76:101,0,24	0/0:19,0:19:38.06:0,38,352	0/0:17,0:17:41.61:0,42,597	0/1:11,1:12:11.77:12,0,123	0/1:16,2:18:33.89:34,0,94	0/0:26,0:23:24.24:0,24,286	0/1:18,0:15:16.94:17,0,103	0/0:8,0:8:16.20:0,16,139	0/0:23,0:23:25.37:0,25,277	0/0:14,0:14:40.53:0,41,238	0/1:17,0:16:30.26:30,0,133	0/1:14,0:14:17.01:42,0,17	0/1:12,0:12:19.08:172,0,19	0/1:29,0:29:17.02:17,0,206	./.
chr10	48810018	.	GAGAA	G	3200.38	PASS	AB=0.995;AC=25;AF=0.500;AN=50;BaseQRankSum=-4.027;DP=451;FS=4.748;HRun=0;HaplotypeScore=160.3833;InbreedingCoeff=0.0012;MQ=50.58;MQ0=8;MQRankSum=1.378;QD=9.64;ReadPosRankSum=0.887;VQSLOD=3.0552;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:6,22:28:33.11:525,33,0	1/1:5,10:15:17.96:286,18,0	./.	./.	./.	1/1:7,17:24:33.11:515,33,0	1/1:13,7:20:9.03:143,9,0	0/0:23,0:20:3:0,3,29	1/1:9,13:22:23.91:348,24,0	0/0:10,0:10:0.47:0,0,1	0/0:9,0:8:5.88:0,6,36	0/1:7,0:7:15.15:15,0,145	0/1:25,0:25:97.02:97,0,237	0/1:18,0:18:54.60:55,0,64	1/1:3,16:19:30.10:478,30,0	1/1:8,8:16:15.05:239,15,0	0/0:12,0:12:9.34:0,9,60	0/0:19,0:19:15.86:0,16,115	0/1:22,0:19:58.25:82,0,58	0/1:16,0:13:61.46:121,0,61	0/1:8,0:8:14.48:14,0,46	0/1:24,0:24:82.85:83,0,180	0/0:15,0:15:18.18:0,18,226	0/1:15,0:15:27.47:27,0,158	0/1:15,0:15:13.55:14,0,35	0/1:12,0:12:16.58:127,0,17	0/1:25,0:25:25.30:191,0,25	0/0:2,0:2:0.33:0,0,1
chr10	48810045	.	AAAGAAAG	A	8642.86	PASS	AB=1.000;AC=35;AF=0.625;AN=56;BaseQRankSum=0.639;DP=454;FS=1.822;HRun=0;HaplotypeScore=170.4518;InbreedingCoeff=0.7013;MQ=56.79;MQ0=3;MQRankSum=-4.013;QD=29.00;ReadPosRankSum=-3.035;VQSLOD=4.3048;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:56.44:0,56,519	0/0:14,0:14:29.69:0,30,259	0/0:14,0:10:26.71:0,27,379	0/0:5,0:2:3.48:0,3,37	1/1:9,0:9:17.92:223,18,0	0/0:19,0:19:38.44:0,38,288	0/0:16,0:16:29.91:0,30,390	1/1:25,0:23:43.56:527,44,0	0/0:16,0:16:29.62:0,30,255	1/1:8,0:8:20.68:213,21,0	1/1:10,0:9:24.51:287,25,0	1/1:10,0:10:0.26:262,0,0	0/1:26,0:26:22.63:674,0,23	1/1:10,3:13:28.74:376,29,0	0/0:22,0:22:47.48:0,47,458	0/0:19,0:19:47.82:0,48,552	1/1:13,0:13:32.84:360,33,0	1/1:18,1:19:42.85:409,43,0	1/1:23,0:22:51.24:752,51,0	1/1:15,0:15:37.22:629,37,0	1/1:11,0:11:24.91:285,25,0	0/1:23,0:23:30.21:601,0,30	0/1:12,0:12:15.11:186,0,15	1/1:17,0:17:7.83:408,8,0	1/1:12,1:13:35.83:415,36,0	1/1:12,6:18:52.55:808,53,0	1/1:25,0:25:42.23:952,42,0	1/1:8,0:8:23.96:276,24,0
chr10	48810049	.	AAAG	A	8764.87	PASS	AB=1.000;AC=44;AF=0.786;AN=56;BaseQRankSum=4.300;DP=456;FS=3.519;HRun=0;HaplotypeScore=136.4629;InbreedingCoeff=0.1766;MQ=58.35;MQ0=2;MQRankSum=-3.002;QD=20.15;ReadPosRankSum=4.678;VQSLOD=4.6906;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:31,0:31:59.63:60,0,277	0/1:16,0:16:29.43:29,0,185	0/0:16,0:12:32.51:0,33,387	0/0:5,0:2:3.01:0,3,37	1/1:8,0:8:18.06:250,18,0	0/1:20,0:20:70.13:70,0,73	0/1:14,0:14:2.56:3,0,231	1/1:21,0:20:47.40:592,47,0	0/1:17,0:17:43.13:43,0,101	1/1:8,0:8:21.07:284,21,0	1/1:11,0:10:27.51:321,28,0	1/1:9,1:10:9.71:250,10,0	1/1:25,0:25:13.21:618,13,0	1/1:13,0:13:38.73:430,39,0	0/1:24,0:24:54.70:55,0,242	0/1:19,0:19:6.29:6,0,362	1/1:13,0:13:33:389,33,0	1/1:21,0:21:53.83:584,54,0	1/1:18,4:21:50.52:642,51,0	1/1:9,6:15:38.16:448,38,0	1/1:10,2:12:28.16:301,28,0	1/1:21,2:23:49.12:694,49,0	0/1:12,0:12:8.55:188,0,9	1/1:16,0:16:9.80:375,10,0	1/1:14,0:14:36.05:440,36,0	1/1:18,0:18:54.02:693,54,0	1/1:13,11:24:43.91:681,44,0	1/1:8,0:8:24.04:316,24,0
chr10	48810052	.	G	GA	10133.55	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=4.398;DP=478;FS=3.595;HRun=3;HaplotypeScore=123.4777;InbreedingCoeff=0.9639;MQ=60.01;MQ0=1;MQRankSum=-4.925;QD=32.38;ReadPosRankSum=-0.339;VQSLOD=3.8647;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:59.01:0,59,518	0/0:15,0:15:35.43:0,35,323	0/0:17,0:13:32.51:0,33,371	0/0:5,0:2:2.81:0,3,37	1/1:1,6:7:18.06:241,18,0	0/0:20,0:20:41.27:0,41,309	0/0:15,0:15:11.80:0,12,287	1/1:3,18:20:51.17:701,51,0	0/0:17,0:17:32.51:0,33,266	1/1:0,9:9:24.08:327,24,0	1/1:2,11:12:30.06:388,30,0	1/1:2,10:12:27.56:367,28,0	1/1:1,23:24:66.30:942,66,0	1/1:3,10:13:38.81:469,39,0	0/0:25,0:25:53.19:0,53,461	0/0:20,0:20:50.74:0,51,532	1/1:2,11:13:39.13:532,39,0	1/1:1,20:21:56.55:762,57,0	1/1:11,15:26:68.95:809,69,0	1/1:8,7:15:43.07:439,43,0	1/1:3,8:11:27.04:333,27,0	1/1:3,21:24:66.69:892,67,0	1/1:0,12:12:33.11:465,33,0	1/1:1,18:19:39.11:522,39,0	1/1:3,12:15:36.01:473,36,0	1/1:8,13:21:53.43:588,53,0	1/1:16,10:26:51.37:555,51,0	1/1:0,11:11:24.08:327,24,0
chr10	48810314	.	T	TGTGTGTGC	2414.08	PASS	AB=0.992;AC=20;AF=0.385;AN=52;BaseQRankSum=-4.909;DP=457;FS=10.913;HRun=0;HaplotypeScore=127.4481;InbreedingCoeff=0.4708;MQ=53.53;MQ0=14;MQRankSum=-3.382;QD=10.59;ReadPosRankSum=-0.573;VQSLOD=1.8721;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:27:59.71:0,60,688	0/0:14,0:14:30.02:0,30,394	./.	./.	0/1:18,0:19:32.91:33,0,51	0/0:20,0:20:50.56:0,51,531	0/0:27,0:23:57.44:0,57,631	0/0:21,0:20:20.03:0,20,169	0/0:7,0:7:11.81:0,12,130	1/1:13,0:12:24.88:278,25,0	0/1:13,0:13:9.76:104,0,10	0/1:28,0:29:27.95:28,0,164	0/1:3,0:3:15.11:15,0,17	1/1:7,8:20:9:238,9,0	0/0:16,0:14:21.01:0,21,244	0/0:11,0:11:16.56:0,17,190	1/1:26,0:25:36.29:297,36,0	1/1:31,0:30:70.78:971,71,0	0/0:15,0:14:25.86:0,26,269	0/0:11,0:11:8.97:0,9,70	0/0:28,0:28:52.15:0,52,449	0/0:14,0:14:10.82:0,11,191	0/1:8,0:8:10.45:10,0,71	0/1:32,0:31:34.47:34,0,320	1/1:12,0:12:8.96:106,9,0	1/1:10,0:16:27.38:402,27,0	0/0:13,0:13:28.85:0,29,367	1/1:6,0:4:5.97:84,6,0
chr10	48810527	.	TCCA	T	16851.68	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=14.702;DP=522;FS=0.721;HRun=0;HaplotypeScore=89.4740;InbreedingCoeff=0.9969;MQ=86.67;MQ0=0;MQRankSum=-7.673;QD=47.47;ReadPosRankSum=2.923;VQSLOD=6.5360;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:90.26:0,90,1971	0/0:8,0:8:24.08:0,24,568	0/0:22,0:22:63.16:0,63,1358	0/0:18,0:18:45.12:0,45,950	1/1:1,18:19:48.16:843,48,0	0/0:26,0:26:75.26:0,75,1745	0/0:17,0:17:51.18:0,51,1201	1/1:1,34:34:96.28:1573,96,0	0/0:15,0:15:45.15:0,45,1064	1/1:1,25:26:75.22:1264,75,0	1/1:0,13:13:36.12:630,36,0	1/1:0,24:24:66.23:1157,66,0	1/1:1,13:14:42.14:722,42,0	1/1:0,13:13:36.12:633,36,0	0/0:17,0:17:51.18:0,51,1205	0/0:14,0:14:42.14:0,42,993	1/1:1,26:27:78.20:1312,78,0	1/1:1,18:19:54.18:952,54,0	1/1:0,23:23:66.19:1081,66,0	1/1:1,17:18:48.10:811,48,0	1/1:2,13:15:36.11:600,36,0	1/1:0,16:16:45.15:791,45,0	1/1:1,9:10:27.09:473,27,0	1/1:0,11:11:33.11:582,33,0	1/1:1,17:18:48.12:813,48,0	1/1:1,27:28:81.24:1344,81,0	1/1:0,21:21:57.20:1005,57,0	1/1:0,5:5:15.05:263,15,0
chr10	48810663	.	G	GA	17456.26	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=17.347;DP=732;FS=0.301;HRun=3;HaplotypeScore=124.5963;InbreedingCoeff=0.9997;MQ=84.40;MQ0=0;MQRankSum=-2.485;QD=35.63;ReadPosRankSum=2.643;VQSLOD=4.0945;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,147,1723	0/0:8,0:8:24.07:0,24,287	0/0:25,0:25:63.08:0,63,684	0/0:37,0:37:70.27:0,70,839	1/1:5,19:24:66.14:842,66,0	0/0:15,0:15:42.11:0,42,491	0/0:20,0:20:51.14:0,51,600	1/1:4,35:39:99:1363,105,0	0/0:26,0:26:78.23:0,78,926	1/1:4,29:33:99:1312,99,0	1/1:1,20:21:63.19:843,63,0	1/1:6,16:22:44.89:746,45,0	1/1:2,18:20:51.17:696,51,0	1/1:0,19:19:54.18:741,54,0	0/0:32,0:32:93.27:0,93,1103	0/0:25,0:25:69.19:0,69,805	1/1:0,33:33:90.30:1234,90,0	1/1:1,23:24:63.21:860,63,0	1/1:1,19:20:57.14:738,57,0	1/1:0,17:17:48.13:637,48,0	1/1:1,38:39:93.31:1267,93,0	1/1:0,21:21:60.20:818,60,0	1/1:3,17:20:54.18:726,54,0	1/1:3,22:25:57.19:781,57,0	1/1:2,21:23:51.17:694,51,0	1/1:9,21:30:78.24:1031,78,0	1/1:3,29:32:78.26:1064,78,0	1/1:2,26:28:78.26:1064,78,0
chr10	48811129	.	C	CA	19074.94	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-16.505;DP=808;FS=1.543;HRun=4;HaplotypeScore=75.0218;InbreedingCoeff=1.0000;MQ=82.77;MQ0=0;MQRankSum=-5.997;QD=36.68;ReadPosRankSum=1.580;VQSLOD=4.9469;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,150,1702	0/0:17,0:17:48.14:0,48,545	0/0:25,0:25:62.94:0,63,678	0/0:19,0:19:54.14:0,54,600	1/1:2,26:28:78.17:1016,78,0	0/0:28,0:28:78.22:0,78,884	0/0:34,0:34:84.22:0,84,942	1/1:0,41:41:99:1607,120,0	0/0:26,0:26:75.21:0,75,846	1/1:1,36:37:99:1436,105,0	1/1:2,16:18:48.16:656,48,0	1/1:2,33:35:96.32:1313,96,0	1/1:3,23:26:66.22:898,66,0	1/1:2,28:30:78.26:1067,78,0	0/0:47,0:47:99:0,132,1487	0/0:38,0:38:99:0,114,1293	1/1:0,23:23:63.21:862,63,0	1/1:2,24:26:66.22:900,66,0	1/1:0,19:19:57.17:748,57,0	1/1:1,22:23:57.15:759,57,0	1/1:1,32:33:96.32:1306,96,0	1/1:2,18:20:51.17:698,51,0	1/1:2,25:27:69.23:943,69,0	1/1:0,35:35:99:1354,99,0	1/1:0,27:27:78.26:1066,78,0	1/1:4,23:26:66.21:886,66,0	1/1:3,27:30:69.11:943,69,0	1/1:0,15:15:45.15:615,45,0
chr10	48814008	.	AT	A	5633.35	PASS	AB=0.744;AC=28;AF=0.500;AN=56;BaseQRankSum=7.899;DP=580;FS=5.191;HRun=10;HaplotypeScore=66.2604;InbreedingCoeff=0.8278;MQ=76.87;MQ0=0;MQRankSum=1.069;QD=18.47;ReadPosRankSum=3.988;VQSLOD=5.6484;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:39:71.22:0,71,374	0/0:9,0:9:27.07:0,27,299	0/0:27,0:20:3.34:0,3,156	0/1:20,1:18:10.77:11,0,167	1/1:3,15:18:25.41:368,25,0	0/0:11,0:11:24.06:0,24,265	0/0:19,0:20:56.97:0,57,602	0/0:32,0:32:72.03:0,72,777	0/0:17,0:17:45.11:0,45,489	1/1:4,16:19:11.79:331,12,0	1/1:3,21:24:32.81:513,33,0	1/1:2,22:24:50.99:443,51,0	1/1:1,15:16:14.88:357,15,0	1/1:3,19:22:23.81:436,24,0	0/0:13,0:13:36.09:0,36,392	0/0:18,1:20:24.92:0,25,486	1/1:4,22:26:65.98:573,66,0	1/1:1,17:18:44.98:391,45,0	0/0:22,0:22:54.15:0,54,597	0/0:26,0:26:72.19:0,72,796	0/0:15,0:15:26.90:0,27,435	1/1:4,16:20:44.99:391,45,0	1/1:2,15:17:38.97:338,39,0	1/1:2,20:22:53.99:469,54,0	0/1:2,6:8:12.18:135,0,12	1/1:5,23:28:65.97:572,66,0	0/0:22,0:23:62.97:0,63,659	1/1:2,18:20:8.81:305,9,0
chr10	48815264	.	GC	G	3526.87	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=6.710;DP=714;FS=2.328;HRun=4;HaplotypeScore=77.1707;InbreedingCoeff=0.9961;MQ=92.11;MQ0=0;MQRankSum=-2.522;QD=31.21;ReadPosRankSum=2.255;VQSLOD=4.2864;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,153,2071	0/0:10,0:10:27.08:0,27,363	0/0:34,0:35:71.91:0,72,1176	0/0:24,0:24:66.10:0,66,823	0/0:16,0:16:48.16:0,48,672	0/0:19,0:19:57.18:0,57,780	0/0:24,0:24:72.23:0,72,989	0/0:24,0:24:63.21:0,63,882	0/0:26,0:26:78.26:0,78,1088	0/0:24,0:24:69.22:0,69,952	0/0:18,0:18:54.16:0,54,723	1/1:1,31:32:72.22:864,72,0	1/1:1,18:19:51.16:612,51,0	0/0:30,0:30:87.28:0,87,1198	0/0:31,0:31:93.31:0,93,1302	0/0:41,0:41:99:0,117,1587	0/0:35,0:35:99:0,99,1369	0/0:31,0:31:93.29:0,93,1282	0/0:19,0:19:57.17:0,57,779	0/0:22,0:22:51.16:0,51,697	0/0:55,0:55:99:0,150,2034	1/1:1,15:16:45.14:540,45,0	1/1:1,20:21:54.17:647,54,0	1/1:1,24:25:72.22:864,72,0	0/0:16,0:16:45.14:0,45,614	0/0:19,0:19:57.17:0,57,766	0/0:24,0:24:69.23:0,69,963	0/0:5,0:5:15.05:0,15,210
chr10	48816073	.	C	CAG	19476.75	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-14.884;DP=753;FS=6.996;HRun=0;HaplotypeScore=85.0687;InbreedingCoeff=0.9996;MQ=91.99;MQ0=1;MQRankSum=-3.817;QD=52.50;ReadPosRankSum=-0.114;VQSLOD=4.6789;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,153,2453	0/0:13,0:13:39.12:0,39,611	0/0:29,0:29:86.92:0,87,1238	0/0:33,0:33:90.21:0,90,1335	1/1:0,29:30:81.21:1575,81,0	0/0:20,0:20:60.20:0,60,976	0/0:29,0:29:87.21:0,87,1347	1/1:0,31:33:99:1785,99,0	0/0:29,0:29:87.25:0,87,1381	1/1:1,27:28:81.25:1548,81,0	1/1:0,17:17:45.15:914,45,0	0/0:21,0:21:57.17:0,57,881	0/0:8,0:8:24.08:0,24,391	1/1:0,28:30:69.24:1401,69,0	0/0:38,0:37:99:0,108,1698	0/0:30,0:30:90.26:0,90,1407	1/1:1,20:21:51.18:1036,51,0	1/1:1,26:27:75.26:1520,75,0	1/1:1,29:30:90.24:1631,90,0	1/1:0,29:29:78.20:1538,78,0	1/1:2,51:52:99:2619,129,0	0/0:22,0:22:58.41:0,58,967	0/0:22,0:22:63.20:0,63,1001	0/0:36,0:36:99:0,105,1571	1/1:0,23:23:57.20:1158,57,0	1/1:1,15:16:45.14:864,45,0	1/1:0,23:24:63.22:1278,63,0	1/1:0,10:10:30.10:609,30,0
chr10	48818551	.	T	TACAC	6492.44	PASS	AB=0.701;AC=18;AF=0.321;AN=56;BaseQRankSum=-0.232;DP=763;FS=1.103;HRun=0;HaplotypeScore=131.9212;InbreedingCoeff=0.6807;MQ=62.14;MQ0=8;MQRankSum=0.732;QD=20.16;ReadPosRankSum=-1.248;VQSLOD=4.3924;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:31:78.14:0,78,1145	0/0:6,0:6:6.02:0,6,99	0/0:27,0:14:11.53:0,12,227	0/1:26,0:16:12.39:12,0,158	0/0:28,0:32:69.15:0,69,970	0/0:13,0:14:33.05:0,33,466	0/0:30,0:33:66.10:0,66,931	1/1:20,13:37:39.21:801,39,0	0/0:29,0:31:69.18:0,69,1016	0/0:39,0:40:93.01:0,93,1338	0/0:17,0:19:33.11:0,33,517	0/1:8,0:27:0.97:142,0,1	0/1:8,0:20:13.08:120,0,13	0/0:25,0:30:57.14:0,57,822	0/0:33,0:35:90.26:0,90,1386	0/0:27,0:27:69.17:0,69,1033	0/0:24,0:26:46.75:0,47,735	0/0:15,0:15:35.48:0,35,550	1/1:12,15:29:55.15:1121,55,0	1/1:4,19:24:4.26:1053,4,0	1/1:10,27:40:53.65:1198,54,0	1/1:6,0:25:49.34:221,49,0	1/1:4,0:19:32.18:149,32,0	0/1:10,0:30:13.50:112,0,13	0/0:25,0:27:63.18:0,63,963	0/0:28,0:28:57.15:0,57,844	1/1:10,25:40:68.71:1562,69,0	0/0:18,0:19:38.51:0,39,796
chr10	48819376	.	TG	T	5212.94	PASS	AB=0.875;AC=46;AF=0.885;AN=52;BaseQRankSum=2.566;DP=355;FS=3.403;HRun=2;HaplotypeScore=107.0373;InbreedingCoeff=0.2176;MQ=40.58;MQ0=0;MQRankSum=-1.848;QD=15.38;ReadPosRankSum=7.035;VQSLOD=4.8213;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:21:25.69:316,26,0	1/1:7,0:7:20.72:142,21,0	./.	./.	1/1:14,0:14:4.93:175,5,0	0/1:15,0:15:6.24:194,0,6	1/1:20,0:20:18.88:275,19,0	1/1:14,0:14:1.90:228,2,0	1/1:7,0:7:20.71:144,21,0	1/1:1,23:24:42.73:443,43,0	0/1:9,0:9:2.08:128,0,2	1/1:15,0:15:19.82:284,20,0	0/0:1,15:16:2.88:0,3,20	1/1:21,0:21:39.11:360,39,0	1/1:25,0:25:28.18:395,28,0	0/1:0,16:16:0:0,0,0	1/1:11,0:11:28.65:182,29,0	0/1:9,0:9:20.18:74,0,20	1/1:10,0:10:29.69:206,30,0	1/1:13,0:13:23.62:161,24,0	1/1:13,0:13:1.40:105,1,0	1/1:12,0:12:35.52:252,36,0	1/1:14,0:14:38.45:270,38,0	1/1:12,0:12:29.23:178,29,0	1/1:7,0:7:20.70:145,21,0	1/1:14,0:14:38.46:271,38,0	1/1:12,0:12:29.66:215,30,0	1/1:4,0:4:8.96:68,9,0
chr10	48820249	.	G	GA	438.90	PASS	AB=0.850;AC=10;AF=0.179;AN=56;BaseQRankSum=-1.508;DP=472;FS=1.673;HRun=14;HaplotypeScore=66.2449;InbreedingCoeff=0.4487;MQ=49.55;MQ0=39;MQRankSum=0.014;QD=4.10;ReadPosRankSum=2.196;VQSLOD=0.9433;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:25:24.39:0,24,155	0/0:8,0:8:8.60:0,9,57	0/0:37,0:1:2.84:0,3,14	0/0:35,0:5:2.82:0,3,19	0/0:10,0:12:12.78:0,13,69	0/0:19,0:21:31.34:0,31,173	0/0:15,0:12:18.80:0,19,107	0/0:16,0:13:23.40:0,23,147	0/0:11,0:10:8.52:0,9,47	0/0:19,0:17:12.81:0,13,69	0/0:12,0:13:18.53:0,19,106	1/1:4,8:12:20.95:177,21,0	1/1:2,3:4:9:79,9,0	0/0:13,0:14:13.69:0,14,81	0/0:10,0:12:15.81:0,16,89	0/0:15,0:16:21.17:0,21,124	0/1:30,1:30:38.77:39,0,157	0/0:17,1:19:5.18:0,5,152	0/0:14,0:14:13.53:0,14,82	0/0:11,0:10:11.38:0,11,76	0/0:12,0:10:14.71:0,15,96	0/1:6,3:7:10.26:44,0,10	0/1:7,7:15:1.16:114,0,1	1/1:9,11:20:15:132,15,0	0/0:12,0:14:30.64:0,31,185	0/0:20,0:20:31.51:0,32,197	0/1:14,0:14:6.80:7,0,62	0/0:6,0:4:4.97:0,5,25
chr10	48821034	.	AACAC	A	629.11	PASS	AB=0.800;AC=15;AF=0.300;AN=50;BaseQRankSum=0.157;DP=605;FS=8.758;HRun=0;HaplotypeScore=106.3041;InbreedingCoeff=0.6938;MQ=68.43;MQ0=16;MQRankSum=0.664;QD=4.49;ReadPosRankSum=2.853;VQSLOD=1.4716;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:49:32.87:0,33,629	0/0:7,0:7:9.03:0,9,105	./.	./.	0/1:6,2:8:0.24:0,0,0	0/0:15,0:15:12.04:0,12,216	0/0:20,0:25:17.90:0,18,264	./.	0/0:19,0:25:6.02:0,6,90	1/1:23,0:22:9.03:124,9,0	1/1:6,0:6:3.01:39,3,0	0/0:18,0:24:6.02:0,6,82	0/0:23,0:22:23.87:0,24,372	0/0:13,0:16:2.74:0,3,12	0/0:16,0:24:17.93:0,18,255	0/0:13,0:21:14.74:0,15,284	1/1:19,10:28:9.03:139,9,0	1/1:16,13:27:12.04:186,12,0	0/0:15,0:15:15.05:0,15,297	0/0:10,0:10:9.03:0,9,178	0/0:38,0:38:34.27:0,34,615	0/0:13,0:18:3.01:0,3,37	0/0:15,0:15:3.01:0,3,52	0/0:31,0:32:11.59:0,12,192	1/1:10,4:14:11.76:113,12,0	1/1:17,6:23:13.17:182,13,0	0/0:12,0:14:17.80:0,18,356	1/1:6,0:7:1.25:3,1,0
chr10	48823116	.	T	TG	4109.84	PASS	AB=0.754;AC=38;AF=0.679;AN=56;BaseQRankSum=-0.482;DP=365;FS=4.954;HRun=8;HaplotypeScore=52.3936;InbreedingCoeff=0.7764;MQ=82.24;MQ0=0;MQRankSum=-2.281;QD=20.25;ReadPosRankSum=0.439;VQSLOD=3.4589;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:72.41:0,72,642	0/1:5,1:6:19.61:20,0,95	0/0:22,0:21:31:0,31,358	0/0:22,0:18:3.92:0,4,187	1/1:4,5:9:21.05:232,21,0	0/0:12,0:12:21.01:0,21,192	0/0:20,0:20:39:0,39,357	1/1:7,0:7:14.78:112,15,0	0/0:18,2:20:7.26:0,7,322	0/1:6,7:13:5.75:177,0,6	1/1:1,3:4:9.03:104,9,0	1/1:2,7:9:18.05:208,18,0	1/1:1,10:12:30.09:345,30,0	1/1:2,13:15:36.11:415,36,0	0/0:17,0:17:38.96:0,39,342	0/0:17,0:17:42:0,42,378	1/1:2,7:9:21.06:242,21,0	1/1:2,13:15:41.99:465,42,0	1/1:11,0:11:25.98:156,26,0	1/1:12,0:12:21.04:131,21,0	1/1:21,0:21:34.63:193,35,0	1/1:1,9:10:20.98:224,21,0	1/1:1,4:5:6.02:69,6,0	1/1:0,7:7:21.06:242,21,0	1/1:0,10:10:24.07:276,24,0	1/1:2,6:9:17.89:188,18,0	1/1:13,0:14:29.05:172,29,0	1/1:0,5:5:12.04:138,12,0
chr10	48823124	.	G	GGA	2566.59	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=-6.298;DP=379;FS=11.015;HRun=0;HaplotypeScore=66.1257;InbreedingCoeff=0.6647;MQ=86.57;MQ0=0;MQRankSum=2.229;QD=23.55;ReadPosRankSum=-2.009;VQSLOD=2.7648;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:90.48:0,90,1120	0/0:6,0:6:15.92:0,16,202	0/0:24,0:23:48.70:0,49,692	0/0:22,0:19:34.57:0,35,453	0/0:10,0:10:16.05:0,16,85	0/0:8,0:8:24.07:0,24,329	0/0:20,0:20:60.10:0,60,742	1/1:0,13:14:42:474,42,0	0/0:17,0:17:49.01:0,49,645	0/0:9,0:9:6.60:0,7,98	0/0:7,0:7:15.28:0,15,100	0/0:11,0:11:11.67:0,12,64	0/0:15,0:15:15.93:0,16,73	0/0:16,0:16:19.99:0,20,104	0/0:16,0:16:48.05:0,48,579	0/0:17,0:17:51.08:0,51,677	0/0:8,0:8:9.91:0,10,39	0/1:14,0:14:6.09:6,0,15	1/1:1,9:12:32.93:505,33,0	1/1:0,9:12:33:513,33,0	1/1:1,19:21:36:681,36,0	0/1:9,0:9:7.30:7,0,25	0/0:5,0:5:4.76:0,5,27	0/0:8,0:8:9.14:0,9,40	0/0:14,0:14:13.80:0,14,71	0/1:10,0:10:4.24:4,0,71	1/1:1,15:17:29.98:552,30,0	0/0:5,0:5:3.90:0,4,9
chr10	48823696	.	T	TAGCAGC	4867.57	PASS	AC=16;AF=0.296;AN=54;BaseQRankSum=-6.818;DP=828;FS=7.779;HRun=0;HaplotypeScore=169.7485;InbreedingCoeff=0.9532;MQ=61.65;MQ0=2;MQRankSum=-6.409;QD=23.74;ReadPosRankSum=-0.642;VQSLOD=3.9330;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:66,0:66:99:0,120,2278	0/0:11,0:11:27.09:0,27,526	0/0:31,0:25:43.41:0,43,750	0/0:33,0:28:27.13:0,27,675	1/1:16,0:16:9:120,9,0	0/0:20,0:20:42.14:0,42,783	0/0:37,0:37:72.25:0,72,1423	0/0:31,0:31:54.18:0,54,977	0/0:42,0:42:99:0,99,2055	1/1:10,6:16:18.06:377,18,0	./.	0/0:38,0:38:93.29:0,93,1866	0/0:26,0:26:66.23:0,66,1400	1/1:12,34:49:60.21:1969,60,0	0/0:36,0:36:75.24:0,75,1491	0/0:30,0:30:69.21:0,69,1343	1/1:16,21:38:21.07:644,21,0	1/1:6,8:16:12.04:368,12,0	0/0:18,0:17:27.08:0,27,484	0/0:19,0:19:21.07:0,21,437	0/0:56,0:56:99:0,126,2369	0/0:19,0:19:30.06:0,30,555	0/0:18,0:17:10.06:0,10,209	0/0:61,0:61:99:0,157,3222	1/1:13,6:19:9.03:284,9,0	1/1:25,12:40:43.35:869,43,0	0/0:21,0:21:45.15:0,45,897	1/1:0,10:11:9.03:236,9,0
chr10	48824036	.	TGTCCTGCCTG	T	6306.21	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=13.410;DP=708;FS=2.074;HRun=0;HaplotypeScore=210.6430;InbreedingCoeff=0.9999;MQ=85.61;MQ0=0;MQRankSum=-12.726;QD=62.44;ReadPosRankSum=-0.097;VQSLOD=4.2038;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:45:99:0,129,6230	0/0:17,0:17:51.18:0,51,2589	0/0:35,0:35:83.70:0,84,3736	0/0:19,0:19:44.99:0,45,2071	0/0:23,0:23:60.21:0,60,3033	0/0:20,0:20:57.20:0,57,2703	0/0:31,0:31:90.31:0,90,4349	0/0:27,0:27:72.25:0,72,3441	0/0:23,0:23:57.20:0,57,2912	0/0:29,0:29:81.28:0,81,4051	0/0:18,0:18:48.16:0,48,2500	1/1:5,20:25:54.19:1709,54,0	1/1:0,17:17:45.15:1447,45,0	0/0:16,0:16:48.15:0,48,2288	0/0:25,0:25:72.25:0,72,3577	0/0:18,0:18:51.16:0,51,2451	0/0:41,0:41:99:0,120,5962	0/0:30,0:30:84.29:0,84,4373	0/0:24,0:24:66.23:0,66,3240	0/0:17,0:17:48.16:0,48,2502	0/0:44,0:44:99:0,129,6039	1/1:1,12:13:33.07:941,33,0	1/1:4,18:22:50.86:1310,51,0	1/1:5,19:24:33:898,33,0	0/0:27,0:27:72.25:0,72,3497	0/0:33,0:33:78.27:0,78,3962	0/0:28,0:28:75.26:0,75,3723	0/0:16,0:16:48.16:0,48,2247
chr10	48824200	.	AAGAG	A	457.37	PASS	AB=1.000;AC=12;AF=0.222;AN=54;BaseQRankSum=0.082;DP=675;FS=0.000;HRun=0;HaplotypeScore=179.5968;InbreedingCoeff=0.4868;MQ=53.64;MQ0=22;MQRankSum=-0.810;QD=2.69;ReadPosRankSum=-2.007;VQSLOD=2.0849;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:36:53.26:0,53,808	0/0:14,0:14:14.77:0,15,190	./.	0/0:19,0:4:0.47:0,0,1	0/0:45,0:45:2.94:0,3,12	1/1:10,6:18:8.98:107,9,0	1/1:19,0:19:13.09:186,13,0	0/0:34,0:33:36.51:0,37,227	1/1:16,10:27:17.82:285,18,0	0/0:26,0:26:46.07:0,46,394	0/0:19,0:18:7.59:0,8,58	0/0:23,0:23:0.62:0,1,20	0/1:17,0:17:2.25:2,0,18	0/0:25,0:24:1.78:0,2,19	0/1:28,0:33:1.83:2,0,403	0/0:11,0:21:17.93:0,18,275	0/0:27,0:26:14.84:0,15,105	0/0:21,0:21:11.95:0,12,132	0/0:13,0:12:3.01:0,3,47	0/0:31,0:31:15.24:0,15,160	0/0:13,0:12:6.02:0,6,94	0/0:29,0:27:2.70:0,3,20	1/1:14,0:13:1.77:4,2,0	0/0:23,0:23:2.27:0,2,20	1/1:40,0:36:1.26:3,1,0	0/0:28,0:25:25.11:0,25,166	0/0:31,0:30:39.66:0,40,397	0/0:13,0:12:16.38:0,16,133
chr10	48824216	.	G	GAGAGACAC	6507.80	PASS	AB=0.751;AC=27;AF=0.500;AN=54;BaseQRankSum=-1.093;DP=679;FS=8.762;HRun=0;HaplotypeScore=221.5280;InbreedingCoeff=0.2737;MQ=48.50;MQ0=27;MQRankSum=-2.674;QD=13.73;ReadPosRankSum=3.522;VQSLOD=2.8299;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:43:96.30:0,96,1746	0/0:14,0:14:39.13:0,39,693	./.	0/0:10,0:1:2.22:0,2,7	1/1:39,0:40:10.62:309,11,0	0/0:23,0:23:36.09:0,36,523	0/0:20,0:18:31.44:0,31,518	0/1:42,0:39:20.96:775,0,21	0/0:19,0:19:38.68:0,39,628	1/1:13,19:31:44.42:1151,44,0	0/1:20,0:19:5.07:342,0,5	0/1:9,12:24:18.02:85,0,18	0/1:7,10:18:43.84:128,0,44	0/1:9,14:23:0.02:47,0,0	0/0:30,0:29:68.04:0,68,884	0/0:22,0:22:42.94:0,43,503	1/1:24,0:23:1.95:484,2,0	0/1:11,13:25:26.39:248,0,26	1/1:13,0:12:8.53:237,9,0	0/1:29,0:29:0.72:201,0,1	1/1:15,0:13:7.83:72,8,0	0/1:13,18:31:41.56:56,0,42	0/0:5,11:16:3.94:0,4,28	1/1:18,1:19:2.43:82,2,0	0/1:17,18:32:19.48:19,0,20	1/1:8,20:26:24.08:1188,24,0	1/1:36,0:35:56.19:575,56,0	1/1:12,1:12:3.37:508,3,0
chr10	48824218	.	G	GAGACAC	5185.09	PASS	AB=0.987;AC=21;AF=0.389;AN=54;BaseQRankSum=-3.826;DP=668;FS=0.413;HRun=0;HaplotypeScore=211.1686;InbreedingCoeff=-0.1037;MQ=48.06;MQ0=27;MQRankSum=-2.311;QD=12.14;ReadPosRankSum=3.183;VQSLOD=3.7419;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:42:99:0,99,1683	0/0:13,0:13:39.13:0,39,672	./.	0/0:8,0:1:2.22:0,2,7	0/1:41,0:41:12:186,0,12	0/0:23,0:23:36.10:0,36,567	0/0:23,0:21:41.71:0,42,545	1/1:44,0:41:84.01:956,84,0	0/0:19,0:19:39.06:0,39,574	0/1:28,1:28:99:665,0,104	0/1:19,1:19:74.85:267,0,75	0/1:20,0:21:15.57:16,0,27	0/1:17,0:17:59.46:59,0,87	0/1:22,0:20:11.14:23,0,11	0/0:30,0:29:77.09:0,77,918	0/0:21,0:21:42.20:0,42,438	0/1:24,0:23:12.67:481,0,13	0/1:22,1:23:91.63:214,0,92	0/1:13,0:12:29.52:207,0,30	0/1:29,0:29:27.45:215,0,27	1/1:14,0:12:1.63:89,2,0	0/1:33,0:31:35.68:36,0,85	0/0:18,0:17:2.24:0,2,24	1/1:20,0:20:2.75:60,3,0	0/0:36,1:32:11.99:0,12,111	0/1:29,0:26:82.86:788,0,83	1/1:35,0:34:15.57:538,16,0	0/1:13,0:12:11.47:386,0,11
chr10	48824220	.	G	GACAC	6096.76	PASS	AB=0.884;AC=19;AF=0.352;AN=54;BaseQRankSum=-5.377;DP=660;FS=3.001;HRun=0;HaplotypeScore=193.4787;InbreedingCoeff=0.0592;MQ=47.65;MQ0=28;MQRankSum=-3.712;QD=15.92;ReadPosRankSum=1.764;VQSLOD=4.4229;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:42:99:0,102,1672	0/0:13,0:13:39.13:0,39,651	./.	0/0:7,0:1:2.37:0,2,8	0/1:16,0:40:36.28:183,0,36	0/0:22,0:22:36.10:0,36,548	0/0:23,0:21:44.32:0,44,612	1/1:12,35:46:99:1771,118,0	0/0:18,0:18:39.05:0,39,499	0/1:28,0:27:99:399,0,363	0/1:18,0:18:99:208,0,122	0/0:20,0:20:8.65:0,9,100	0/1:17,0:17:35.16:35,0,145	0/0:22,0:20:8.72:0,9,74	0/0:31,0:30:77.89:0,78,959	0/0:19,0:19:41.95:0,42,484	0/1:23,0:23:30.61:481,0,31	0/1:20,1:21:99:157,0,166	1/1:9,6:15:21.35:426,21,0	0/1:7,20:28:5.55:405,0,6	1/1:3,9:12:7.27:171,7,0	0/1:31,0:29:35.78:36,0,133	0/0:17,0:16:2.56:0,3,45	0/1:10,0:20:16.17:35,0,16	0/0:37,0:32:11.88:0,12,181	0/1:26,0:23:99:492,0,132	1/1:13,19:35:44.78:969,45,0	0/1:13,0:12:54.33:330,0,54
chr10	48824246	.	G	GAGAGAC	9548.89	PASS	AB=1.000;AC=39;AF=0.696;AN=56;BaseQRankSum=1.390;DP=617;FS=0.939;HRun=0;HaplotypeScore=196.0003;InbreedingCoeff=0.8621;MQ=49.29;MQ0=24;MQRankSum=-3.221;QD=21.56;ReadPosRankSum=-0.771;VQSLOD=4.5642;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:46:84.12:0,84,1498	0/0:9,0:9:21.07:0,21,391	0/0:11,0:2:2.74:0,3,12	0/1:16,0:8:1.89:2,0,83	1/1:23,0:23:8.41:162,8,0	0/0:21,0:21:45.13:0,45,808	0/0:19,0:17:35.76:0,36,658	1/1:41,0:38:66.18:1029,66,0	0/0:19,0:19:42.12:0,42,750	1/1:38,0:37:73.08:1484,73,0	1/1:23,0:22:30.10:597,30,0	1/1:17,0:17:18.50:266,18,0	1/1:24,0:24:35.69:722,36,0	1/1:18,0:16:6.02:126,6,0	0/0:27,0:26:54.05:0,54,1026	0/0:21,0:21:43.03:0,43,788	1/1:18,0:17:13.17:273,13,0	1/1:16,0:16:25.57:444,26,0	1/1:24,0:20:26.05:412,26,0	1/1:22,1:23:24.52:458,25,0	1/1:16,0:15:12.51:207,13,0	1/1:25,0:24:16.81:384,17,0	1/1:15,0:14:6.49:151,6,0	1/1:20,1:21:14.70:285,15,0	1/1:23,0:20:17.17:387,17,0	1/1:21,0:19:37.89:768,38,0	1/1:28,4:31:48.15:1026,48,0	1/1:8,1:9:18.05:367,18,0
chr10	48825804	.	T	TCCAG	2267.72	PASS	AB=0.790;AC=6;AF=0.107;AN=56;BaseQRankSum=11.453;DP=693;FS=8.304;HRun=0;HaplotypeScore=161.4813;InbreedingCoeff=0.2677;MQ=78.41;MQ0=0;MQRankSum=-11.247;QD=20.62;ReadPosRankSum=0.334;VQSLOD=2.7225;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,147,2645	0/0:11,0:11:30.10:0,30,617	0/0:17,0:17:47.94:0,48,853	0/0:20,0:20:53.99:0,54,801	0/0:17,0:17:45.13:0,45,771	0/0:15,0:15:45.11:0,45,866	0/0:27,0:27:81.18:0,81,1467	0/0:35,0:35:96.29:0,96,1802	0/0:31,0:31:93.30:0,93,1868	0/0:25,0:25:66.20:0,66,1219	0/0:17,0:17:42.07:0,42,560	1/1:20,9:29:45.25:955,45,0	0/1:11,9:20:18.77:713,0,19	0/0:26,0:26:75.26:0,75,1555	0/0:32,0:32:93.29:0,93,1863	0/0:21,0:21:63.21:0,63,1271	0/0:34,0:34:99:0,99,2022	0/0:33,0:33:96.26:0,96,1878	0/0:24,0:24:66.20:0,66,1246	0/0:11,0:11:33.10:0,33,655	0/0:55,0:55:99:0,150,2954	0/1:18,2:20:99:219,0,128	0/1:9,3:12:26.96:153,0,27	0/1:20,9:29:12.75:358,0,13	0/0:12,0:12:36.10:0,36,629	0/0:35,0:35:93.24:0,93,1554	0/0:25,0:25:72.20:0,72,1381	0/0:5,0:5:12:0,12,208
chr10	48825805	.	T	TGCTTCTC	4674.06	PASS	AB=0.805;AC=6;AF=0.107;AN=56;BaseQRankSum=10.786;DP=701;FS=0.891;HRun=0;HaplotypeScore=197.4858;InbreedingCoeff=0.2720;MQ=78.23;MQ0=0;MQRankSum=-11.741;QD=41.00;ReadPosRankSum=-3.471;VQSLOD=3.7511;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,135,3329	0/0:11,0:11:30.10:0,30,835	0/0:18,0:18:51:0,51,1124	0/0:19,0:19:51.08:0,51,1067	0/0:17,0:17:35.95:0,36,877	0/0:16,0:16:45.11:0,45,1134	0/0:27,0:27:78.21:0,78,1864	0/0:35,0:35:90.30:0,90,2340	0/0:31,0:31:93.31:0,93,2468	0/0:23,0:23:60.11:0,60,1463	0/0:17,0:17:30.03:0,30,552	0/1:21,9:31:24.46:1667,0,24	1/1:12,8:21:60.16:1536,60,0	0/0:26,0:26:78.25:0,78,2063	0/0:32,0:32:96.30:0,96,2530	0/0:22,0:22:63.20:0,63,1668	0/0:35,0:35:99:0,99,2708	0/0:33,0:33:93.32:0,93,2533	0/0:23,0:23:60.16:0,60,1546	0/0:13,0:13:30.10:0,30,805	0/0:56,0:56:99:0,153,3962	0/1:19,2:21:33.51:517,0,34	0/1:10,3:13:19.01:380,0,19	0/1:18,9:28:12.21:574,0,12	0/0:15,0:15:33.09:0,33,794	0/0:37,0:37:78.25:0,78,1849	0/0:25,0:25:75.18:0,75,1801	0/0:5,0:5:14.98:0,15,293
chr10	48826241	.	A	AG	3521.75	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=4.966;DP=679;FS=24.624;HRun=6;HaplotypeScore=75.6828;InbreedingCoeff=0.9928;MQ=81.20;MQ0=0;MQRankSum=-2.604;QD=30.10;ReadPosRankSum=1.947;VQSLOD=1.9339;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,129,1300	0/0:12,0:12:33.07:0,33,336	0/0:25,0:25:52.77:0,53,516	0/0:19,0:18:12.11:0,12,269	0/0:17,0:17:48.06:0,48,476	0/0:23,0:23:63.14:0,63,641	0/0:32,0:32:90.19:0,90,910	0/0:26,0:26:57.10:0,57,575	0/0:25,0:25:66.15:0,66,672	0/0:20,0:20:45.09:0,45,459	0/0:18,0:18:42.05:0,42,417	1/1:3,27:30:72.22:893,72,0	1/1:2,16:18:48.15:603,48,0	0/0:24,0:24:72.16:0,72,732	0/0:39,0:39:99:0,108,1087	0/0:24,0:24:66.15:0,66,673	0/0:29,0:29:78.06:0,78,766	0/0:23,0:23:66.11:0,66,663	0/0:23,0:23:60.12:0,60,606	0/0:16,0:16:39.08:0,39,397	0/0:52,0:52:99:0,138,1386	1/1:2,19:21:48.15:603,48,0	1/1:0,16:16:33.11:414,33,0	1/1:2,30:32:81.25:1008,81,0	0/0:13,0:13:36.08:0,36,366	0/0:20,0:20:51.09:0,51,507	0/0:25,0:25:72.16:0,72,733	0/0:12,0:12:36.08:0,36,367
chr10	48826363	.	A	ATG	11205.65	PASS	AB=0.587;AC=25;AF=0.446;AN=56;BaseQRankSum=-16.031;DP=855;FS=2.520;HRun=0;HaplotypeScore=96.3583;InbreedingCoeff=0.7867;MQ=60.63;MQ0=10;MQRankSum=1.141;QD=30.62;ReadPosRankSum=4.913;VQSLOD=6.5325;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,123,1486	0/0:9,0:9:24.07:0,24,291	0/0:50,0:21:34.45:0,34,358	0/0:46,0:34:42.11:0,42,606	1/1:2,14:17:30.10:484,30,0	0/0:25,0:25:51.14:0,51,606	0/0:30,0:30:69.20:0,69,820	0/0:29,0:29:54.16:0,54,655	0/0:24,0:24:57.17:0,57,690	1/1:7,21:28:33.02:1013,33,0	1/1:1,12:13:36.12:581,36,0	1/1:7,28:36:8.49:1137,8,0	1/1:5,14:19:8.74:621,9,0	0/1:13,24:36:54.41:986,0,54	0/0:37,0:38:84.24:0,84,1006	0/0:28,0:28:75.20:0,75,894	1/1:9,30:40:75.26:1209,75,0	1/1:3,25:28:20.80:835,21,0	0/0:30,0:30:65.22:0,65,758	0/0:20,0:20:51.14:0,51,607	0/0:73,1:76:99:0,129,2007	0/1:7,10:17:3.28:435,0,3	1/1:1,13:14:21.07:339,21,0	1/1:10,34:45:41.88:1174,42,0	1/1:6,24:30:29.84:980,30,0	1/1:6,27:32:16.38:1188,16,0	0/0:31,0:32:72.04:0,72,834	0/1:1,7:8:18.32:224,0,18
chr10	48827254	.	CT	C	2258.09	PASS	AB=0.870;AC=20;AF=0.357;AN=56;BaseQRankSum=-0.821;DP=543;FS=3.639;HRun=13;HaplotypeScore=87.2538;InbreedingCoeff=0.7099;MQ=68.20;MQ0=0;MQRankSum=3.128;QD=10.41;ReadPosRankSum=5.058;VQSLOD=3.4670;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:84.11:0,84,806	0/1:4,1:5:6.89:7,0,99	0/1:20,0:17:1.73:2,0,76	0/1:9,0:7:11.79:12,0,35	1/1:4,15:21:42.80:296,43,0	0/0:21,0:21:42.06:0,42,404	0/0:10,1:11:2.13:0,2,183	0/0:12,0:37:65.89:0,66,363	0/0:15,0:15:33.02:0,33,305	0/1:9,11:22:2.81:205,0,3	1/1:3,14:17:38.72:284,39,0	0/0:15,0:15:29.70:0,30,159	0/0:18,0:20:38.93:0,39,237	1/1:2,16:20:40.81:290,41,0	0/0:25,1:26:35.14:0,35,484	0/0:24,0:24:57.09:0,57,555	1/1:4,17:22:43.77:312,44,0	1/1:3,16:20:34.84:247,35,0	0/0:12,0:27:58.07:0,58,363	0/0:5,0:21:46.26:0,46,264	0/0:6,0:16:17.34:0,17,107	0/0:8,0:8:5.78:0,6,32	0/0:19,0:23:51.12:0,51,301	0/0:4,0:5:8.87:0,9,58	1/1:6,18:24:41.55:306,42,0	1/1:9,17:26:43.91:324,44,0	0/0:10,1:25:18.51:0,19,204	1/1:1,10:11:23.86:175,24,0
chr10	48828753	.	TA	T	707.45	PASS	AB=0.865;AC=24;AF=0.429;AN=56;BaseQRankSum=-0.163;DP=369;FS=2.254;HRun=16;HaplotypeScore=56.0093;InbreedingCoeff=0.2974;MQ=83.90;MQ0=7;MQRankSum=-1.215;QD=3.28;ReadPosRankSum=2.220;VQSLOD=-0.4953;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:26:1.44:0,1,186	0/0:4,0:4:3:0,3,25	0/1:34,0:18:1.97:2,0,26	0/0:30,0:16:11.18:0,11,61	1/1:2,1:3:2.93:18,3,0	0/1:17,1:18:0.19:0,0,204	0/0:9,0:9:14.98:0,15,124	0/0:12,1:12:5.13:0,5,132	0/0:6,0:6:11.97:0,12,98	1/1:6,4:11:11.19:71,11,0	1/1:4,4:8:12.41:86,12,0	0/1:11,1:14:30.96:31,0,77	0/1:7,2:9:15.16:15,0,92	1/1:4,3:7:8.75:54,9,0	0/0:8,0:9:12.42:0,12,118	0/1:9,1:10:0.03:0,0,107	0/1:14,7:22:16.43:123,0,16	1/1:12,9:22:28.04:167,28,0	0/0:8,2:9:1.65:0,2,92	0/1:13,4:19:44.44:44,0,75	0/1:4,2:6:13.86:33,0,14	0/0:4,0:5:8.95:0,9,69	0/0:13,0:13:11.94:0,12,90	0/0:12,0:12:17.95:0,18,144	1/1:3,6:10:16.66:95,17,0	1/1:7,7:14:3.85:106,4,0	0/0:13,1:14:7.58:0,8,148	1/1:6,2:8:5.67:36,6,0
chr10	48828778	.	G	GA	3180.98	PASS	AB=0.773;AC=35;AF=0.648;AN=54;BaseQRankSum=-2.722;DP=340;FS=6.630;HRun=10;HaplotypeScore=46.1521;InbreedingCoeff=0.3315;MQ=74.35;MQ0=4;MQRankSum=-0.771;QD=13.04;ReadPosRankSum=-0.724;VQSLOD=2.6933;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,1:21:2.19:0,2,336	./.	0/1:28,0:10:6.64:18,0,7	0/0:35,0:15:4.76:0,5,50	0/1:4,1:5:16.99:28,0,17	0/0:17,1:18:6.93:0,7,263	0/0:6,0:6:8.96:0,9,74	0/1:8,12:19:14.18:270,0,14	0/0:6,0:6:11.98:0,12,98	0/1:5,6:11:3.59:171,0,4	1/1:1,9:10:27.03:276,27,0	1/1:5,8:13:12.03:128,12,0	0/1:4,3:8:7.61:96,0,8	1/1:3,0:3:3:25,3,0	0/0:9,0:9:14.96:0,15,123	0/1:7,1:8:11.02:11,0,127	0/1:16,8:24:1.46:227,0,1	1/1:7,11:18:33.05:340,33,0	1/1:10,3:14:23.93:234,24,0	1/1:1,10:11:27.07:288,27,0	1/1:3,4:7:12.02:123,12,0	1/1:2,1:3:3.01:32,3,0	1/1:2,9:11:21.05:224,21,0	1/1:5,4:9:11.62:106,12,0	1/1:4,7:11:12.39:212,12,0	1/1:4,9:13:30.08:319,30,0	1/1:5,9:13:18.05:192,18,0	1/1:2,0:2:3.01:32,3,0
chr10	48829331	.	G	GA	4778.87	PASS	AB=0.657;AC=24;AF=0.429;AN=56;BaseQRankSum=-9.879;DP=525;FS=10.527;HRun=10;HaplotypeScore=53.0014;InbreedingCoeff=0.5927;MQ=72.17;MQ0=0;MQRankSum=-0.993;QD=19.51;ReadPosRankSum=-0.104;VQSLOD=5.1034;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,114,928	0/0:8,0:9:20.01:0,20,154	0/1:11,0:9:11.52:12,0,81	0/0:8,0:8:11.83:0,12,92	0/1:6,9:16:6.99:305,0,7	0/0:26,0:27:70.94:0,71,572	0/0:21,0:21:44.94:0,45,369	0/0:24,2:26:21.91:0,22,383	0/0:20,0:20:44.92:0,45,369	1/1:5,18:23:5.73:464,6,0	0/1:5,10:15:0.58:200,0,1	1/1:4,8:13:5.30:245,5,0	1/1:3,14:17:17.42:379,17,0	1/1:2,16:19:44.98:462,45,0	0/0:21,0:24:63.03:0,63,485	0/0:13,0:13:32.94:0,33,271	0/1:5,12:17:7.18:342,0,7	1/1:2,20:22:57.14:607,57,0	0/0:21,1:22:24.93:0,25,409	0/0:17,0:17:44.08:0,44,368	0/0:20,0:20:38.11:0,38,319	1/1:3,20:24:10.69:509,11,0	1/1:6,12:18:11.51:327,12,0	0/1:1,9:10:0.58:200,0,1	1/1:2,11:13:5.43:263,5,0	0/1:7,12:19:28.93:305,0,29	0/0:25,0:28:72.03:0,72,560	1/1:0,7:7:15.04:159,15,0
chr10	48829879	.	CAACA	C	4524.46	PASS	AB=0.955;AC=25;AF=0.446;AN=56;BaseQRankSum=6.473;DP=619;FS=2.481;HRun=0;HaplotypeScore=119.4476;InbreedingCoeff=0.9166;MQ=63.85;MQ0=2;MQRankSum=-1.484;QD=18.77;ReadPosRankSum=1.099;VQSLOD=4.3939;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,1:35:28.11:0,28,1626	0/0:12,0:12:30.10:0,30,712	0/0:31,0:26:11.99:0,12,179	0/0:34,0:28:18.02:0,18,340	1/1:9,9:19:21.07:330,21,0	1/1:5,12:17:27.09:424,27,0	1/1:10,13:23:30.10:471,30,0	0/0:34,0:34:21.05:0,21,329	1/1:5,16:21:45.15:707,45,0	1/1:15,12:28:42.14:654,42,0	1/1:8,3:11:12.02:165,12,0	0/0:22,0:22:39.13:0,39,919	0/0:13,0:13:21.04:0,21,406	1/1:10,5:14:15.05:236,15,0	0/0:22,0:22:36.12:0,36,854	0/1:20,1:21:8.01:8,0,814	1/1:23,8:30:30.07:446,30,0	1/1:13,5:18:17.18:281,17,0	0/0:26,0:26:24.08:0,24,569	0/0:18,0:18:27.07:0,27,547	0/0:29,0:29:42.13:0,42,938	0/0:23,0:23:45.15:0,45,1066	0/0:24,0:24:36.12:0,36,854	0/0:32,0:32:30.10:0,30,711	1/1:5,7:12:21.07:330,21,0	1/1:13,5:17:15.05:236,15,0	0/0:23,0:23:36.12:0,36,844	1/1:2,5:7:15.05:236,15,0
chr10	48829938	.	GAA	G	11242.66	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=9.788;DP=457;FS=44.944;HRun=3;HaplotypeScore=95.2792;InbreedingCoeff=0.9956;MQ=75.75;MQ0=0;MQRankSum=-6.122;QD=42.27;ReadPosRankSum=3.470;VQSLOD=2.1195;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:93.32:0,93,1770	0/0:11,0:11:33.11:0,33,637	0/0:18,0:18:41.84:0,42,664	0/0:17,0:17:33.10:0,33,547	1/1:0,12:12:33.11:502,33,0	0/0:19,0:19:48.16:0,48,896	0/0:25,0:25:72.25:0,72,1391	1/1:1,19:20:54.18:826,54,0	0/0:27,0:27:78.22:0,78,1458	1/1:0,9:9:27.09:413,27,0	1/1:0,13:13:33.11:505,33,0	1/1:0,22:22:66.22:1010,66,0	1/1:0,8:8:24.08:367,24,0	1/1:1,5:6:15.05:230,15,0	0/0:22,0:22:63.22:0,63,1217	0/0:20,0:20:57.20:0,57,1084	1/1:1,20:20:51.17:772,51,0	1/1:0,12:12:27.09:413,27,0	1/1:0,13:13:39.11:574,39,0	1/1:0,14:14:39.13:597,39,0	1/1:0,29:29:78.26:1177,78,0	1/1:0,20:20:57.19:871,57,0	1/1:1,10:11:30.10:459,30,0	1/1:0,16:16:45.15:689,45,0	1/1:0,13:13:39.13:596,39,0	1/1:0,12:12:36.12:551,36,0	1/1:0,7:7:21.07:321,21,0	1/1:0,8:8:24.08:367,24,0
chr10	48830179	.	C	CG	1115.92	PASS	AB=0.885;AC=23;AF=0.411;AN=56;BaseQRankSum=2.265;DP=296;FS=52.333;HRun=0;HaplotypeScore=50.0812;InbreedingCoeff=0.0607;MQ=82.86;MQ0=0;MQRankSum=0.198;QD=5.72;ReadPosRankSum=2.174;VQSLOD=1.3646;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:35.87:0,36,289	0/0:3,0:3:8.97:0,9,71	0/0:27,0:17:40.28:0,40,351	0/1:16,0:10:2.93:3,0,122	0/1:5,0:5:13.57:35,0,14	0/0:9,0:9:14.96:0,15,121	0/0:26,0:26:57.96:0,58,436	1/1:4,2:6:11.97:119,12,0	0/0:6,0:6:17.88:0,18,135	0/0:2,0:2:0:0,0,0	0/1:3,0:3:1.89:10,0,2	0/1:13,0:13:46.83:76,0,47	0/1:9,0:9:32.38:32,0,57	0/1:4,5:13:44.69:90,0,45	0/0:6,0:6:18:0,18,156	0/0:7,0:7:15.01:0,15,146	1/1:2,14:27:16.53:201,17,0	0/1:6,17:31:9.61:287,0,10	0/1:8,0:8:20.03:71,0,20	1/1:7,1:8:5.42:28,5,0	1/1:11,1:12:15.16:167,15,0	0/1:7,0:7:6.50:6,0,23	0/0:2,0:2:4.53:0,5,15	0/1:14,0:14:34.41:34,0,64	1/1:6,0:6:9.77:68,10,0	0/1:2,1:3:27.04:27,0,33	0/1:4,6:11:23.92:26,0,24	0/1:2,0:2:5.97:6,0,11
chr10	48830184	.	CA	C	1859.64	PASS	AB=1.000;AC=37;AF=0.685;AN=54;BaseQRankSum=4.461;DP=298;FS=17.619;HRun=2;HaplotypeScore=45.3455;InbreedingCoeff=0.7690;MQ=86.50;MQ0=0;MQRankSum=-2.233;QD=8.94;ReadPosRankSum=4.595;VQSLOD=-0.5299;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:38.95:0,39,324	0/0:1,0:1:3:0,3,27	0/0:20,0:15:41.55:0,42,350	0/1:15,0:11:26.32:26,0,63	1/1:3,0:3:5.59:36,6,0	0/0:9,0:9:18.01:0,18,159	0/0:23,0:23:23.34:0,23,203	1/1:11,0:11:26.88:221,27,0	0/0:5,0:5:14.81:0,15,118	1/1:2,0:2:3:28,3,0	1/1:5,0:5:8.34:55,8,0	1/1:17,0:17:26.52:215,27,0	1/1:7,0:7:10.05:62,10,0	1/1:11,0:11:11.62:72,12,0	0/0:9,0:9:24.01:0,24,219	0/0:7,0:7:21:0,21,189	1/1:30,1:30:26.35:183,26,0	1/1:27,0:27:23.02:123,23,0	1/1:6,0:6:17.92:148,18,0	1/1:2,5:7:11.87:79,12,0	1/1:15,1:16:29.95:258,30,0	1/1:8,0:8:20.99:120,21,0	1/1:4,0:4:11.05:70,11,0	1/1:16,0:16:30.67:178,31,0	1/1:5,0:6:8.99:75,9,0	1/1:4,0:4:8.59:60,9,0	1/1:11,0:11:7.91:47,8,0	./.
chr10	48833436	.	CAGAGAGAGAGAG	C	1046.02	PASS	AB=0.950;AC=22;AF=0.440;AN=50;BaseQRankSum=6.275;DP=504;FS=19.641;HRun=0;HaplotypeScore=191.8947;InbreedingCoeff=0.5551;MQ=67.78;MQ0=12;MQRankSum=-3.282;QD=5.28;ReadPosRankSum=-1.440;VQSLOD=1.4217;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:47.44:0,47,1737	0/0:5,0:5:12.04:0,12,380	./.	./.	0/1:8,0:8:0:0,0,0	0/0:15,0:22:12.03:0,12,421	0/0:21,0:24:24.04:0,24,651	0/0:20,0:18:7.75:0,8,60	0/0:20,0:20:30.56:0,31,1094	1/1:14,2:16:5.22:175,5,0	./.	1/1:18,0:22:15.49:132,15,0	1/1:18,0:18:4.36:48,4,0	1/1:13,2:15:2.29:101,2,0	0/0:18,0:22:39.11:0,39,1015	0/0:11,0:14:9.03:0,9,431	1/1:16,0:23:6.02:167,6,0	1/1:10,5:13:3.01:103,3,0	0/0:7,0:7:7.17:0,7,46	0/0:12,0:12:5.68:0,6,37	0/0:27,0:26:12.86:0,13,145	0/1:12,0:14:2.35:2,0,17	0/1:11,1:12:0.08:108,0,0	1/1:22,0:23:3.01:45,3,0	1/1:10,3:13:3.01:53,3,0	1/1:7,4:11:14.75:239,15,0	0/0:14,0:19:19.54:0,20,173	0/1:6,0:6:27.12:35,0,27
chr10	48838426	.	GA	G	3538.87	PASS	AB=0.770;AC=38;AF=0.679;AN=56;BaseQRankSum=7.666;DP=404;FS=6.345;HRun=12;HaplotypeScore=42.4717;InbreedingCoeff=0.6200;MQ=74.59;MQ0=0;MQRankSum=0.379;QD=12.46;ReadPosRankSum=2.640;VQSLOD=3.0806;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:33:83.91:0,84,795	0/0:3,0:3:9.01:0,9,86	0/1:11,1:12:0.09:0,0,34	0/1:8,0:8:0.41:0,0,44	1/1:1,6:7:17.92:139,18,0	0/0:23,1:24:36.82:0,37,515	0/0:15,2:17:3.82:0,4,220	1/1:7,24:31:67.63:510,68,0	0/0:11,0:11:25.90:0,26,272	1/1:4,9:13:20.88:162,21,0	1/1:2,9:11:11.84:92,12,0	0/1:4,6:11:7.49:122,0,7	1/1:2,13:15:35.85:279,36,0	1/1:1,10:11:20.90:163,21,0	0/0:18,0:19:41.92:0,42,410	0/0:12,0:13:35.91:0,36,349	1/1:4,19:23:18.73:319,19,0	1/1:2,14:16:5.44:225,5,0	1/1:4,10:14:23.84:186,24,0	1/1:3,5:9:4.20:86,4,0	1/1:5,16:21:1.54:219,2,0	1/1:2,2:4:5.95:46,6,0	1/1:2,5:7:8.71:69,9,0	0/1:3,17:20:10.07:297,0,10	1/1:4,5:9:11.88:93,12,0	1/1:2,12:14:26.93:246,27,0	1/1:6,12:18:4.14:123,4,0	1/1:0,8:8:20.92:163,21,0
chr10	48839438	.	A	ATTT	7985.77	PASS	AB=1.000;AC=39;AF=0.696;AN=56;BaseQRankSum=-0.276;DP=488;FS=3.308;HRun=9;HaplotypeScore=79.9416;InbreedingCoeff=0.8967;MQ=70.62;MQ0=2;MQRankSum=-3.694;QD=24.20;ReadPosRankSum=-3.272;VQSLOD=2.7356;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:77.28:0,77,1101	0/0:15,0:15:39.08:0,39,479	0/0:12,0:12:14.41:0,14,244	0/1:17,0:15:4.90:5,0,188	1/1:7,9:17:31.47:334,31,0	0/0:17,0:17:42.08:0,42,530	0/0:13,0:15:25.54:0,26,318	1/1:6,7:14:24.05:371,24,0	0/0:26,0:26:69.14:0,69,844	1/1:5,13:18:42.12:745,42,0	1/1:6,6:15:15:225,15,0	1/1:4,12:17:18.06:327,18,0	1/1:3,5:10:4.57:60,5,0	1/1:6,0:6:12:152,12,0	0/0:19,0:19:36.01:0,36,455	0/0:15,0:15:33.06:0,33,417	1/1:1,19:21:39.11:733,39,0	1/1:1,15:19:33.03:523,33,0	1/1:9,6:18:30:427,30,0	1/1:4,13:17:41.99:650,42,0	1/1:2,8:12:24.08:449,24,0	1/1:5,13:19:19.62:352,20,0	1/1:7,8:17:19.29:287,19,0	1/1:5,19:23:36.12:710,36,0	1/1:4,11:17:13.60:241,14,0	1/1:1,10:13:36.04:548,36,0	1/1:8,15:26:33.09:532,33,0	1/1:1,6:9:18.02:316,18,0
chr10	48839569	.	C	CAAAAACA	10843.53	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=6.215;DP=508;FS=21.785;HRun=0;HaplotypeScore=109.8676;InbreedingCoeff=0.8939;MQ=52.33;MQ0=7;MQRankSum=-9.843;QD=34.31;ReadPosRankSum=1.669;VQSLOD=2.4601;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,111,2504	0/0:8,0:8:14.35:0,14,210	0/0:22,0:12:12.92:0,13,337	0/0:28,0:16:26.45:0,26,458	1/1:9,8:17:9.03:276,9,0	0/0:19,0:19:48.16:0,48,1104	0/0:21,0:21:48.15:0,48,1046	1/1:13,0:21:30.10:871,30,0	0/0:16,0:15:33.11:0,33,721	1/1:6,7:15:14.99:457,15,0	1/1:9,11:21:18.06:563,18,0	1/1:3,14:20:21.07:780,21,0	1/1:5,11:18:21.07:787,21,0	1/1:2,8:12:9.03:338,9,0	0/0:22,0:22:51.13:0,51,1051	0/0:16,0:16:39.13:0,39,913	1/1:8,10:19:9.03:338,9,0	1/1:9,5:15:6.02:221,6,0	1/1:7,9:17:33.11:928,33,0	1/1:6,13:19:24.04:731,24,0	1/1:3,5:10:6.02:209,6,0	1/1:5,9:15:18.06:674,18,0	1/1:8,9:20:15.05:562,15,0	1/1:4,4:10:21.07:647,21,0	1/1:6,9:16:12.04:451,12,0	1/1:10,12:23:33.09:1064,33,0	1/1:12,9:22:24.55:841,25,0	1/1:1,0:2:3.01:106,3,0
chr10	48840448	.	T	TA	21694.63	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-16.667;DP=769;FS=3.558;HRun=3;HaplotypeScore=66.9989;InbreedingCoeff=0.9990;MQ=86.01;MQ0=0;MQRankSum=-4.093;QD=44.09;ReadPosRankSum=1.778;VQSLOD=3.7107;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,132,1841	0/0:8,0:8:21.07:0,21,294	0/0:25,0:25:68.25:0,68,907	0/0:24,0:24:69.21:0,69,931	1/1:0,20:20:60.20:958,60,0	0/0:26,0:26:78.23:0,78,1056	0/0:23,0:23:69.21:0,69,943	1/1:1,31:32:90.31:1436,90,0	0/0:40,0:40:99:0,120,1644	1/1:0,22:23:69.22:1078,69,0	1/1:0,19:19:54.18:860,54,0	1/1:0,33:33:87.30:1390,87,0	1/1:0,28:28:81.27:1262,81,0	1/1:0,25:25:60.20:959,60,0	0/0:45,0:45:99:0,135,1852	0/0:41,0:41:99:0,123,1720	1/1:0,29:29:75.26:1199,75,0	1/1:0,24:24:72.25:1151,72,0	1/1:0,25:25:75.23:1128,75,0	1/1:0,16:16:39.13:623,39,0	1/1:0,69:69:99:3117,196,0	1/1:0,14:14:36.12:576,36,0	1/1:0,9:9:24.08:382,24,0	1/1:0,35:35:99:1630,102,0	1/1:0,16:16:45.15:719,45,0	1/1:0,31:32:96.32:1500,96,0	1/1:0,31:31:75.26:1199,75,0	1/1:0,12:12:33.11:527,33,0
chr10	48845026	.	T	TA	12048.99	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-5.824;DP=558;FS=0.000;HRun=6;HaplotypeScore=56.1175;InbreedingCoeff=0.9988;MQ=72.79;MQ0=0;MQRankSum=-0.900;QD=30.97;ReadPosRankSum=2.022;VQSLOD=5.3227;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:93.08:0,93,911	0/0:10,0:10:27.05:0,27,270	0/0:9,0:9:21.03:0,21,203	0/0:10,0:11:24.06:0,24,200	1/1:3,14:17:39.12:488,39,0	0/0:21,0:21:60.11:0,60,600	0/0:22,0:22:60.11:0,60,599	1/1:2,35:37:99:1200,102,0	0/0:19,0:19:54.12:0,54,550	1/1:2,14:16:36.12:453,36,0	1/1:2,19:21:57.14:696,57,0	1/1:1,20:21:54.17:679,54,0	1/1:0,21:21:48.15:604,48,0	1/1:3,14:17:36.12:452,36,0	0/0:25,0:25:66.14:0,66,668	0/0:19,0:19:57.10:0,57,567	1/1:3,26:29:75.24:943,75,0	1/1:4,14:18:39.12:490,39,0	1/1:2,16:19:48.10:559,48,0	1/1:2,21:23:63.13:773,63,0	1/1:1,20:21:57.18:717,57,0	1/1:4,14:18:39.60:492,40,0	1/1:1,13:14:36.12:453,36,0	1/1:2,16:18:45.14:566,45,0	1/1:1,16:17:39.12:491,39,0	1/1:1,15:16:45.08:521,45,0	1/1:3,26:29:65.95:830,66,0	1/1:0,17:17:51.16:642,51,0
chr10	48845289	.	CA	C	19334.13	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=12.346;DP=754;FS=4.134;HRun=1;HaplotypeScore=76.8198;InbreedingCoeff=0.9984;MQ=85.80;MQ0=0;MQRankSum=-3.085;QD=39.14;ReadPosRankSum=4.616;VQSLOD=5.5075;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:57:99:0,163,2575	0/0:13,0:13:39.12:0,39,600	0/0:27,0:27:81.27:0,81,1279	0/0:20,0:20:57.19:0,57,886	1/1:0,28:28:78.26:1089,78,0	0/0:30,0:30:90.27:0,90,1390	0/0:26,0:26:78.27:0,78,1247	1/1:0,43:43:99:1692,126,0	0/0:30,0:30:90.29:0,90,1415	1/1:0,27:27:78:1090,78,0	1/1:0,12:12:24.08:336,24,0	1/1:0,30:30:87.29:1217,87,0	1/1:0,36:36:99:1426,102,0	1/1:0,27:27:78.26:1091,78,0	0/0:30,0:30:90.31:0,90,1438	0/0:27,0:27:81.26:0,81,1267	1/1:0,26:26:72.24:1006,72,0	1/1:0,20:20:60.20:838,60,0	1/1:0,20:20:60.16:801,60,0	1/1:0,26:26:72.24:1006,72,0	1/1:0,45:45:99:1804,129,0	1/1:0,22:22:63.21:881,63,0	1/1:0,24:24:63.19:881,63,0	1/1:0,18:18:51.17:713,51,0	1/1:0,20:20:57.19:797,57,0	1/1:0,26:26:78.24:1071,78,0	1/1:0,35:35:96.32:1342,96,0	1/1:0,9:9:18.06:252,18,0
chr10	48847135	.	CTCT	C	1157.86	PASS	AB=0.952;AC=16;AF=0.308;AN=52;BaseQRankSum=4.773;DP=812;FS=0.480;HRun=0;HaplotypeScore=185.0421;InbreedingCoeff=-0.3471;MQ=35.28;MQ0=110;MQRankSum=-6.928;QD=2.60;ReadPosRankSum=-4.859;VQSLOD=0.8094;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:48,1:37:96.31:0,96,2091	0/0:9,0:5:15.05:0,15,327	./.	./.	1/1:16,2:15:0.80:15,1,0	0/0:29,0:26:44.22:0,44,1288	0/0:46,0:36:84:0,84,1532	0/0:26,0:14:6.88:0,7,217	0/0:35,0:29:75.26:0,75,1686	0/1:32,1:25:62.67:63,0,288	0/1:21,1:17:11.90:12,0,42	0/0:42,0:34:9.43:0,9,369	0/1:39,1:33:16.04:16,0,490	0/0:30,0:27:23.48:0,23,206	0/0:32,0:28:72.23:0,72,1484	0/0:41,0:37:99:0,105,2243	0/1:40,1:23:44.82:45,0,255	0/1:37,5:28:99:302,0,181	0/1:22,0:19:30.05:30,0,228	0/1:20,2:20:31.46:31,0,262	0/1:52,6:35:41.58:375,0,42	0/0:28,0:21:4.62:0,5,114	0/1:16,1:16:48.59:49,0,152	0/1:35,1:21:99:119,0,153	0/1:19,0:16:29.92:30,0,40	0/1:39,1:29:98.94:99,0,286	0/1:27,1:27:64.50:65,0,341	0/1:6,1:5:26.73:58,0,27
chr10	48847156	.	TTCCTCC	T	1807.49	PASS	AB=0.950;AC=18;AF=0.346;AN=52;BaseQRankSum=4.438;DP=815;FS=14.874;HRun=0;HaplotypeScore=206.8478;InbreedingCoeff=-0.5153;MQ=36.62;MQ0=115;MQRankSum=-1.764;QD=3.37;ReadPosRankSum=-4.038;VQSLOD=0.7738;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:39:95:0,95,2000	0/0:10,0:8:18.05:0,18,393	./.	./.	0/1:15,3:15:22.85:96,0,23	0/0:34,0:28:66.18:0,66,1451	0/0:54,0:40:80.05:0,80,1474	0/0:26,0:15:35.58:0,36,375	0/0:41,0:33:90.12:0,90,1831	0/1:28,2:16:99:104,0,208	0/1:21,3:18:66.32:320,0,66	0/1:38,0:30:99:178,0,243	0/1:29,0:21:43.42:43,0,171	0/1:14,14:25:62.17:62,0,82	0/0:28,0:24:54.11:0,54,1366	0/0:34,0:31:81.20:0,81,2095	0/1:39,1:24:55.88:56,0,402	0/1:39,1:27:99:110,0,372	0/1:29,0:25:47.75:48,0,351	0/1:27,0:25:18.97:19,0,338	0/1:53,0:34:82.72:83,0,280	0/1:31,0:24:77.26:99,0,77	0/1:17,0:15:88.86:89,0,117	0/1:35,0:22:4.03:4,0,299	0/1:14,2:13:27.43:157,0,27	0/1:38,4:31:99:372,0,342	0/1:33,0:31:99:103,0,481	0/1:7,0:4:17.79:18,0,59
chr10	48847162	.	CTCCTCTTCCTCT	C	2919.22	PASS	AB=0.976;AC=23;AF=0.442;AN=52;BaseQRankSum=6.928;DP=833;FS=6.023;HRun=0;HaplotypeScore=278.9879;InbreedingCoeff=-0.2079;MQ=37.87;MQ0=111;MQRankSum=-5.200;QD=5.07;ReadPosRankSum=-5.041;VQSLOD=0.8857;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:39:77.26:0,77,1539	0/0:8,0:7:15.01:0,15,234	./.	./.	1/1:19,0:16:4.29:117,4,0	0/0:32,0:28:66.01:0,66,1180	0/0:56,0:43:98.79:0,99,1363	0/1:25,0:15:13.52:14,0,87	0/0:43,0:36:69.05:0,69,1250	0/1:30,0:16:91.68:197,0,92	1/1:25,0:20:32.52:326,33,0	0/1:37,0:29:63.93:167,0,64	0/1:28,0:20:43.21:124,0,43	0/1:32,0:28:5.79:84,0,6	0/0:32,0:28:66.04:0,66,1329	0/0:33,0:31:81.17:0,81,1942	0/1:40,0:26:99:159,0,125	0/1:37,0:24:65.17:101,0,65	0/1:13,17:25:34.76:277,0,35	0/1:27,0:25:22.83:139,0,23	0/1:55,0:37:27.34:191,0,27	1/1:29,0:23:23.54:149,24,0	0/1:18,0:16:18.35:103,0,18	0/1:38,0:26:57.85:139,0,58	0/1:16,0:13:11.14:86,0,11	0/1:47,0:36:99:416,0,124	0/1:33,0:31:99:242,0,104	1/1:7,0:4:0.64:52,1,0
chr10	48850374	.	C	CGTGTGTGTGTGTGT	9185.96	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=8.794;DP=752;FS=3.503;HRun=0;HaplotypeScore=266.3662;InbreedingCoeff=0.7776;MQ=53.46;MQ0=10;MQRankSum=-9.004;QD=20.32;ReadPosRankSum=-1.445;VQSLOD=3.6354;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:63.26:0,63,2153	0/0:19,0:20:4.98:0,5,1070	0/0:30,0:18:31.90:0,32,453	0/0:38,0:23:6.80:0,7,453	1/1:14,0:14:2.79:26,3,0	0/0:25,0:26:69.18:0,69,2033	0/0:28,0:32:81.25:0,81,1983	1/1:43,0:38:61.27:896,61,0	0/0:29,0:29:78.21:0,78,2215	1/1:40,0:36:66.18:1265,66,0	1/1:18,0:17:11.98:137,12,0	1/1:4,12:27:3.01:202,3,0	1/1:3,1:18:9.03:533,9,0	1/1:4,9:16:3.01:197,3,0	0/0:26,0:27:75.16:0,75,2252	0/0:30,0:31:69.19:0,69,2004	1/1:25,0:25:41.96:928,42,0	1/1:5,17:26:15.05:709,15,0	1/1:21,0:17:13.22:530,13,0	1/1:30,0:29:26.68:407,27,0	1/1:32,0:33:26.80:242,27,0	1/1:3,1:23:3.01:107,3,0	1/1:19,0:17:2.99:50,3,0	0/0:6,0:28:0.45:0,0,1	1/1:7,0:28:5.99:152,6,0	1/1:36,0:34:69:1428,69,0	1/1:18,0:20:38.96:957,39,0	1/1:12,0:12:15.03:421,15,0
chr10	48851428	.	CAG	C	11716.05	PASS	AB=1.000;AC=40;AF=0.714;AN=56;BaseQRankSum=15.985;DP=463;FS=4.008;HRun=0;HaplotypeScore=80.4041;InbreedingCoeff=0.8689;MQ=53.55;MQ0=12;MQRankSum=0.320;QD=37.79;ReadPosRankSum=2.388;VQSLOD=7.1741;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:34:87.28:0,87,1713	0/0:11,0:11:24.08:0,24,473	0/1:4,0:2:0.83:1,0,56	0/1:9,0:5:13.21:13,0,46	1/1:2,24:24:51.17:832,51,0	0/0:19,0:19:57.20:0,57,1142	0/0:22,0:21:57.18:0,57,1119	1/1:0,13:12:24.08:382,24,0	0/0:13,0:13:33.10:0,33,634	1/1:0,16:16:45.14:706,45,0	1/1:2,12:11:30.10:489,30,0	1/1:0,13:13:33.58:539,34,0	1/1:0,8:8:21:311,21,0	1/1:0,13:13:33.11:533,33,0	0/0:34,0:34:99:0,99,1995	0/0:19,0:19:57.18:0,57,1096	1/1:1,19:19:48.16:782,48,0	1/1:0,15:15:39.13:636,39,0	1/1:0,21:20:57.18:904,57,0	1/1:0,19:19:48.10:751,48,0	1/1:2,13:13:23.95:391,24,0	1/1:1,13:13:36.12:587,36,0	1/1:0,12:12:30.10:489,30,0	1/1:0,14:14:36.12:586,36,0	1/1:0,14:14:33.11:538,33,0	1/1:0,15:15:42.14:685,42,0	1/1:0,25:25:66.23:1071,66,0	1/1:0,10:10:30.10:489,30,0
chr10	48851496	.	C	CAA	3606.46	PASS	AB=0.855;AC=37;AF=0.661;AN=56;BaseQRankSum=3.351;DP=495;FS=0.000;HRun=15;HaplotypeScore=98.9665;InbreedingCoeff=0.6211;MQ=45.91;MQ0=17;MQRankSum=-5.665;QD=10.30;ReadPosRankSum=-4.142;VQSLOD=1.2650;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,1:34:0.94:0,1,315	0/0:5,0:6:5.45:0,5,35	0/0:14,0:7:9.35:0,9,45	0/0:10,0:7:17.37:0,17,114	1/1:13,7:22:36.63:337,37,0	0/0:14,0:17:25.80:0,26,235	0/0:13,0:13:20.69:0,21,165	1/1:25,0:25:22.24:189,22,0	0/0:13,0:15:17.38:0,17,129	1/1:8,3:13:18.51:138,19,0	1/1:11,1:11:5.85:48,6,0	1/1:8,0:8:11.13:82,11,0	1/1:8,0:10:6.92:53,7,0	1/1:10,5:15:0.30:185,0,0	0/0:31,0:32:35.04:0,35,268	0/1:14,0:18:5.01:5,0,92	1/1:18,6:26:25.75:322,26,0	0/1:13,2:14:40.22:143,0,40	1/1:26,1:28:48.15:400,48,0	1/1:16,2:22:38.52:350,39,0	1/1:5,0:5:4.82:33,5,0	1/1:7,0:11:12.23:100,12,0	1/1:10,0:11:8.73:66,9,0	1/1:10,0:10:9.41:76,9,0	1/1:16,3:21:11.59:302,12,0	1/1:18,5:25:44.16:384,44,0	1/1:23,0:27:25.31:260,25,0	0/1:7,3:10:3.91:132,0,4
chr10	48851650	.	TGAAAGAAAGAAA	T	368.69	PASS	AB=1.000;AC=8;AF=0.167;AN=48;BaseQRankSum=-0.627;DP=490;FS=3.567;HRun=0;HaplotypeScore=172.9751;InbreedingCoeff=0.2378;MQ=58.75;MQ0=7;MQRankSum=1.061;QD=4.50;ReadPosRankSum=2.068;VQSLOD=2.6520;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:18.03:0,18,378	1/1:1,4:5:5.26:117,5,0	./.	./.	0/0:26,0:26:42.09:0,42,977	0/0:21,0:21:30.07:0,30,879	0/0:20,0:20:24.01:0,24,491	./.	0/0:12,0:12:9.01:0,9,189	0/0:17,0:17:24.08:0,24,693	0/0:11,0:11:12.03:0,12,358	0/1:11,0:10:11.50:12,0,350	0/1:13,0:13:25.77:26,0,59	0/0:14,0:14:18.04:0,18,521	1/1:11,7:18:3.01:101,3,0	0/0:13,0:13:15.05:0,15,351	0/0:25,0:25:36.07:0,36,882	0/0:19,0:19:24.53:0,25,616	0/0:17,0:16:24.08:0,24,818	0/0:18,0:17:18.06:0,18,591	./.	0/1:14,0:14:77.27:85,0,77	0/1:21,0:21:99:153,0,299	0/0:34,0:34:4.53:0,5,800	0/0:19,0:18:24.08:0,24,1034	0/0:21,0:21:32.89:0,33,807	0/0:22,0:22:24.08:0,24,838	0/0:16,0:15:21.07:0,21,883
chr10	48853773	.	TACGCATGAC	T	6888.56	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=14.192;DP=788;FS=1.377;HRun=0;HaplotypeScore=233.8172;InbreedingCoeff=0.9988;MQ=91.98;MQ0=0;MQRankSum=-14.222;QD=61.51;ReadPosRankSum=0.287;VQSLOD=4.6184;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,111,5219	0/0:16,0:16:45.15:0,45,2206	0/0:39,0:39:99:0,105,4551	0/0:30,0:30:84.29:0,84,3574	0/0:32,0:32:78.27:0,78,3665	0/0:32,0:32:93.32:0,93,4540	0/0:23,0:23:66.23:0,66,3130	0/0:34,0:34:87.30:0,87,4019	0/0:28,0:28:78.27:0,78,3711	0/0:28,0:28:81.28:0,81,3863	0/0:26,0:26:72.25:0,72,3300	1/1:1,25:26:69.15:1947,69,0	1/1:4,20:24:54.14:1602,54,0	0/0:20,0:20:57.20:0,57,2579	0/0:33,0:33:99:0,99,4528	0/0:35,0:35:99:0,105,4957	0/0:18,0:18:54.16:0,54,2364	0/0:11,0:11:27.09:0,27,1324	0/0:23,0:23:69.24:0,69,3312	0/0:42,0:42:99:0,123,5679	0/0:48,0:48:99:0,141,6551	1/1:2,34:36:78.18:1994,78,0	1/1:0,16:16:30.57:931,31,0	1/1:1,9:10:21.50:414,21,0	0/0:23,0:23:69.24:0,69,3269	0/0:29,0:29:87.26:0,87,4041	0/0:46,0:46:99:0,138,6243	0/0:23,0:23:66.23:0,66,3200
chr10	48854084	.	TGACAGACA	T	2632.42	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=14.934;DP=883;FS=0.559;HRun=0;HaplotypeScore=273.0052;InbreedingCoeff=0.5531;MQ=57.90;MQ0=8;MQRankSum=-7.731;QD=7.59;ReadPosRankSum=0.443;VQSLOD=2.2725;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:58:99:0,117,4394	0/0:11,0:11:30.09:0,30,1051	0/1:30,0:14:10.81:11,0,240	0/0:35,0:19:11.92:0,12,247	0/1:28,0:28:1.80:2,0,3	0/0:23,0:24:66.21:0,66,2503	0/0:29,0:29:51.14:0,51,1810	0/0:36,0:36:63.16:0,63,2043	0/0:41,0:41:87.30:0,87,3386	0/1:32,0:32:4.67:5,0,56	0/0:31,0:32:1.67:0,2,25	1/1:15,25:40:59.93:1185,60,0	1/1:9,15:25:41.92:820,42,0	0/1:36,0:36:8.23:9,0,8	0/0:53,0:55:99:0,111,4067	0/0:34,0:34:69.19:0,69,2638	1/1:25,0:25:8.86:19,9,0	0/0:12,0:12:5.11:0,5,21	0/0:21,0:21:25.90:0,26,861	0/0:36,0:36:72.15:0,72,2358	0/0:41,0:42:90.30:0,90,3400	1/1:16,16:32:23.73:296,24,0	1/1:8,11:19:14.91:185,15,0	1/1:25,19:44:12.03:259,12,0	0/0:25,0:25:4.42:0,4,24	0/1:36,0:36:19.99:22,0,20	0/0:31,0:32:72.23:0,72,2743	0/0:13,0:13:2.67:0,3,16
chr10	48854099	.	CAGACA	C	9000.47	PASS	AB=1.000;AC=22;AF=0.393;AN=56;BaseQRankSum=15.986;DP=855;FS=8.505;HRun=0;HaplotypeScore=194.2539;InbreedingCoeff=0.6548;MQ=55.68;MQ0=10;MQRankSum=-4.317;QD=25.50;ReadPosRankSum=6.115;VQSLOD=3.3726;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:58:99:0,159,4471	0/0:16,0:16:48.16:0,48,1264	0/0:34,0:14:9.14:0,9,608	0/0:38,0:21:57.15:0,57,1044	1/1:0,19:19:14.84:337,15,0	0/0:27,0:27:78.20:0,78,2296	0/0:24,0:24:72.25:0,72,1861	0/0:36,0:36:99:0,105,2421	0/0:40,0:40:99:0,120,3391	1/1:0,27:28:81.28:1594,81,0	1/1:1,27:28:26.37:585,26,0	0/1:38,0:38:99:263,0,431	0/1:26,0:26:99:174,0,410	1/1:0,35:35:69.24:1559,69,0	0/0:50,0:50:99:0,138,3849	0/0:33,0:33:96.30:0,96,2568	1/1:2,20:22:30.10:698,30,0	1/1:0,15:15:15.05:318,15,0	0/0:20,0:20:60.20:0,60,1358	0/0:35,0:35:99:0,105,2670	0/0:40,0:40:99:0,117,3372	0/1:25,0:25:14.72:15,0,338	0/0:18,0:18:0.07:0,0,246	0/1:44,0:44:47.75:48,0,303	1/1:0,19:19:30.10:653,30,0	1/1:1,39:40:99:2298,107,0	0/0:33,0:33:96.18:0,96,2674	1/1:0,14:14:21.07:459,21,0
chr10	48855955	.	T	TAC	2307.12	PASS	AB=0.777;AC=23;AF=0.426;AN=54;BaseQRankSum=0.479;DP=647;FS=1.137;HRun=0;HaplotypeScore=112.4132;InbreedingCoeff=0.2520;MQ=65.08;MQ0=4;MQRankSum=0.992;QD=7.16;ReadPosRankSum=-1.008;VQSLOD=3.0966;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:39:45.36:0,45,221	0/0:11,0:11:12.02:0,12,124	./.	0/0:38,0:24:3:0,3,30	0/1:15,12:28:9.39:291,0,9	0/0:16,0:17:29.74:0,30,292	0/1:30,0:30:24.07:24,0,207	1/1:23,0:23:12.69:96,13,0	0/0:24,0:24:21.05:0,21,231	0/1:11,7:20:40.83:182,0,41	1/1:10,8:18:5.11:213,5,0	0/0:22,0:25:29.57:0,30,272	0/0:19,0:20:20.83:0,21,183	1/1:12,3:15:18:222,18,0	0/0:35,0:38:50.78:0,51,513	0/1:24,1:26:18.26:18,0,218	0/1:11,7:18:17.11:306,0,17	1/1:4,8:11:18.06:270,18,0	1/1:20,0:20:10.16:86,10,0	0/1:18,2:22:5.75:20,0,6	1/1:24,0:24:2.72:21,3,0	0/0:23,0:26:29.86:0,30,292	0/0:30,0:31:29.80:0,30,302	0/0:28,0:34:56.48:0,56,552	0/1:9,5:14:45.02:204,0,45	0/1:13,10:23:37.89:369,0,38	1/1:20,0:19:12.01:128,12,0	0/1:3,4:7:27.03:39,0,27
chr10	48856057	.	CTG	C	1557.11	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=7.146;DP=675;FS=1.086;HRun=0;HaplotypeScore=124.8004;InbreedingCoeff=0.8408;MQ=68.23;MQ0=3;MQRankSum=-3.730;QD=16.93;ReadPosRankSum=0.710;VQSLOD=3.8746;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,2:44:42.88:0,43,1623	0/0:5,0:5:15.05:0,15,246	0/0:40,1:25:30.26:0,30,462	0/0:43,0:28:25.55:0,26,446	0/0:15,0:16:8.26:0,8,69	0/0:22,0:22:16.50:0,16,782	0/0:29,0:29:75.19:0,75,1119	0/0:28,0:23:35.82:0,36,297	0/0:41,1:42:86.18:0,86,1871	0/0:11,0:11:13.94:0,14,91	0/0:9,0:9:0:0,0,0	0/0:29,0:29:75.24:0,75,1198	0/0:23,0:23:63.19:0,63,974	0/0:15,0:23:18.01:0,18,165	0/0:43,1:43:83.10:0,83,1750	0/0:32,1:33:56.05:0,56,1353	0/0:11,0:18:8.98:0,9,83	0/0:6,0:6:8.97:0,9,86	1/1:6,8:14:26.83:292,27,0	1/1:5,7:12:15.05:177,15,0	1/1:15,21:34:30.55:359,31,0	0/0:18,0:18:45.14:0,45,692	0/0:14,0:14:33.06:0,33,468	0/0:29,0:29:72.21:0,72,1122	0/0:11,0:17:2.74:0,3,26	0/0:29,0:29:32.99:0,33,217	1/1:6,23:30:78.08:885,78,0	0/0:7,0:7:8.92:0,9,63
chr10	48856075	.	GAGAC	G	1616.74	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=9.306;DP=617;FS=4.927;HRun=0;HaplotypeScore=133.2435;InbreedingCoeff=0.3973;MQ=64.93;MQ0=4;MQRankSum=-2.865;QD=9.40;ReadPosRankSum=-2.638;VQSLOD=2.0848;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:93.32:0,93,2182	0/0:6,0:6:9.03:0,9,220	0/0:38,0:16:18.06:0,18,315	0/0:48,0:32:44.94:0,45,928	1/1:7,0:7:1.83:18,2,0	0/0:26,0:26:57.20:0,57,1351	0/0:31,0:31:69.24:0,69,1585	0/1:12,0:11:47.42:47,0,51	0/0:48,0:48:99:0,105,2476	0/1:6,0:6:23.11:34,0,23	1/1:4,0:4:5.93:40,6,0	0/0:32,0:32:72.25:0,72,1637	0/0:22,0:22:63.20:0,63,1480	0/1:14,0:14:29.42:29,0,133	0/0:47,0:46:99:0,111,2652	0/0:35,1:36:28.76:0,29,1703	0/1:12,0:12:7.86:8,0,42	1/1:7,0:6:8.83:56,9,0	1/1:12,1:13:9.03:144,9,0	1/1:3,7:10:18.06:288,18,0	1/1:25,6:29:11.82:146,12,0	0/0:17,0:17:42.14:0,42,962	0/0:16,0:16:39.13:0,39,893	0/0:33,0:33:81.28:0,81,1855	0/1:10,0:10:16.09:28,0,16	0/1:13,0:13:60.99:64,0,61	1/1:6,23:29:57.19:891,57,0	0/1:4,0:4:10.68:11,0,16
chr10	48856270	.	T	TG	13223.56	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-5.518;DP=692;FS=20.291;HRun=1;HaplotypeScore=75.6975;InbreedingCoeff=0.9998;MQ=89.76;MQ0=0;MQRankSum=-4.074;QD=40.32;ReadPosRankSum=0.142;VQSLOD=2.8646;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:90.27:0,90,1150	0/0:19,0:19:56.92:0,57,712	0/0:21,0:21:58.06:0,58,655	0/0:32,0:32:85.20:0,85,1042	1/1:1,25:26:66.05:977,66,0	0/0:30,0:30:90.29:0,90,1166	0/0:23,0:23:63.20:0,63,818	1/1:1,38:39:99:1704,114,0	0/0:32,0:32:93.29:0,93,1190	1/1:1,29:30:84.28:1257,84,0	1/1:1,22:23:60.20:899,60,0	0/0:23,0:23:60.19:0,60,777	0/0:18,0:18:51.14:0,51,631	1/1:0,11:11:30.10:439,30,0	0/0:34,0:34:99:0,99,1256	0/0:29,0:29:87.27:0,87,1114	1/1:0,30:30:84.28:1259,84,0	1/1:0,10:10:27.09:405,27,0	1/1:1,17:18:51.17:757,51,0	1/1:1,18:19:54.14:775,54,0	1/1:1,32:33:90.30:1349,90,0	0/0:26,0:26:78.25:0,78,1013	0/0:21,0:21:63.20:0,63,817	0/0:26,0:26:78.22:0,78,981	1/1:1,21:22:60.20:899,60,0	1/1:0,22:22:66.22:976,66,0	1/1:1,26:27:66.22:988,66,0	1/1:2,16:18:36.12:540,36,0
chr10	48857652	.	AG	A	6314.08	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=9.452;DP=546;FS=1.516;HRun=2;HaplotypeScore=60.7095;InbreedingCoeff=0.9976;MQ=82.89;MQ0=0;MQRankSum=-1.323;QD=36.50;ReadPosRankSum=2.609;VQSLOD=5.4910;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:66.15:0,66,922	0/0:6,0:6:18.06:0,18,270	0/0:14,0:14:42.14:0,42,607	0/0:19,0:19:45.62:0,46,666	1/1:0,12:12:36.12:467,36,0	0/0:21,0:21:60.10:0,60,849	0/0:29,0:29:84.26:0,84,1218	1/1:0,22:22:60.15:748,60,0	0/0:18,0:18:54.17:0,54,789	1/1:0,8:8:21.07:272,21,0	1/1:0,8:8:24.08:312,24,0	0/0:33,0:33:99:0,99,1463	0/0:26,0:26:78.26:0,78,1167	1/1:0,22:22:66.21:856,66,0	0/0:17,0:17:51.17:0,51,764	0/0:11,0:11:33.10:0,33,476	1/1:1,33:34:93.30:1207,93,0	1/1:0,31:31:84.27:1089,84,0	0/0:14,0:14:39.10:0,39,538	0/0:17,0:17:51.16:0,51,744	0/0:58,0:58:99:0,172,2561	0/0:16,0:16:48.16:0,48,717	0/0:9,0:9:27.09:0,27,405	0/0:22,0:22:66.21:0,66,969	1/1:1,13:14:39.13:506,39,0	1/1:0,12:12:36.12:467,36,0	0/0:21,0:21:63.17:0,63,919	1/1:0,10:10:30.10:389,30,0
chr10	48858163	.	A	ACT	12946.63	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=19.849;DP=716;FS=2.483;HRun=0;HaplotypeScore=125.6485;InbreedingCoeff=0.9998;MQ=84.28;MQ0=0;MQRankSum=-8.167;QD=51.58;ReadPosRankSum=1.492;VQSLOD=5.1268;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,105,1694	0/0:11,0:11:33.11:0,33,536	0/0:20,0:20:56.16:0,56,818	0/0:26,0:26:58.14:0,58,869	1/1:0,26:27:51.18:1034,51,0	0/0:24,0:24:66.21:0,66,1046	0/0:28,0:28:81.25:0,81,1272	1/1:0,33:34:99:1910,99,0	0/0:33,0:33:99:0,99,1502	1/1:0,31:33:87.25:1653,87,0	1/1:0,23:24:57.20:1152,57,0	0/0:31,0:31:93.32:0,93,1512	0/0:23,0:23:69.22:0,69,1088	1/1:0,27:27:66.23:1335,66,0	0/0:27,0:27:81.21:0,81,1212	0/0:28,0:28:81.26:0,81,1291	1/1:0,26:26:72.25:1461,72,0	1/1:0,17:17:39.13:791,39,0	0/0:14,0:14:42.13:0,42,651	0/0:24,0:24:72.21:0,72,1119	0/0:26,0:26:75.21:0,75,1150	0/0:27,0:27:81.25:0,81,1251	0/0:20,0:20:57.18:0,57,898	0/0:40,0:40:99:0,117,1830	1/1:2,19:21:54.19:1096,54,0	1/1:0,33:33:99:1969,99,0	0/0:28,0:28:84.23:0,84,1278	1/1:0,9:9:27.09:547,27,0
chr10	48858851	.	CTTTTG	C	7922.90	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=14.897;DP=609;FS=5.781;HRun=0;HaplotypeScore=117.7639;InbreedingCoeff=0.9973;MQ=74.39;MQ0=0;MQRankSum=-4.018;QD=37.55;ReadPosRankSum=1.658;VQSLOD=4.7276;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:75.23:0,75,2029	0/0:8,0:8:18.06:0,18,525	0/0:33,0:31:50.34:0,50,1328	0/0:31,0:28:18.20:0,18,701	1/1:5,18:23:42.14:728,42,0	0/0:20,0:20:48.16:0,48,1367	0/0:19,0:19:54.10:0,54,1425	1/1:4,21:25:63.19:1111,63,0	0/0:19,0:19:45.15:0,45,1208	1/1:7,13:20:36.12:686,36,0	1/1:3,11:14:27.09:497,27,0	0/0:19,0:19:42.14:0,42,1225	0/0:26,0:26:51.17:0,51,1431	1/1:6,23:29:51.17:989,51,0	0/0:18,0:18:48.16:0,48,1355	0/0:15,0:14:42.14:0,42,1227	1/1:3,21:24:39.13:756,39,0	1/1:1,15:16:33.11:640,33,0	0/0:29,0:29:60.15:0,60,1506	0/0:32,0:32:75.24:0,75,2063	0/0:20,0:20:48.16:0,48,1326	0/0:19,0:19:51.18:0,51,1466	0/0:18,0:18:45.14:0,45,1250	0/0:20,0:20:51.18:0,51,1457	1/1:1,15:16:30.10:581,30,0	1/1:9,20:29:60.21:1125,60,0	0/0:22,0:22:60.21:0,60,1719	1/1:0,15:15:42.14:811,42,0
chr10	48859260	.	T	TAA	107.61	PASS	AB=0.833;AC=9;AF=0.237;AN=38;BaseQRankSum=2.601;DP=143;FS=7.714;HRun=0;HaplotypeScore=31.0575;InbreedingCoeff=0.6100;MQ=61.58;MQ0=21;MQRankSum=-0.366;QD=6.73;ReadPosRankSum=1.163;VQSLOD=0.9403;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:16:39.05:0,39,549	0/0:5,0:5:15.05:0,15,236	0/0:4,0:3:5.16:0,5,25	0/0:5,0:3:3.01:0,3,37	./.	0/0:12,0:11:28.90:0,29,398	0/0:4,0:4:12.01:0,12,148	0/0:4,0:1:3.01:0,3,46	0/0:5,0:4:12.04:0,12,185	./.	./.	1/1:1,2:2:6.02:79,6,0	0/1:4,0:5:0.19:7,0,0	./.	0/0:9,0:8:24.08:0,24,361	0/0:12,0:12:36.12:0,36,565	./.	./.	0/0:16,0:15:45.15:0,45,694	0/0:8,0:8:24.08:0,24,382	0/0:2,0:2:6.02:0,6,88	1/1:1,1:2:3.01:39,3,0	1/1:1,2:3:6:62,6,0	1/1:1,1:1:3.01:39,3,0	./.	./.	0/0:11,0:11:33.11:0,33,494	./.
chr10	48859806	.	G	GCTCTTC	4574.55	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-3.799;DP=338;FS=31.692;HRun=0;HaplotypeScore=106.9338;InbreedingCoeff=0.8931;MQ=78.36;MQ0=0;MQRankSum=-2.912;QD=43.57;ReadPosRankSum=-2.457;VQSLOD=2.5049;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:78.19:0,78,1605	0/0:7,0:7:14.98:0,15,254	0/0:20,0:19:33.41:0,33,618	0/0:18,0:16:13.75:0,14,458	1/1:6,0:6:14.96:180,15,0	0/0:9,0:9:23.95:0,24,412	0/0:28,0:28:64.62:0,65,1196	1/1:3,19:28:64.10:1727,64,0	0/0:11,0:11:30.02:0,30,556	1/1:1,7:8:21.03:346,21,0	1/1:1,5:6:6.02:208,6,0	0/0:11,0:11:27.05:0,27,566	0/0:16,0:16:39.02:0,39,694	1/1:2,8:11:14.64:426,15,0	0/0:8,0:8:17.96:0,18,263	0/0:5,0:5:12.03:0,12,237	1/1:1,11:14:12.04:418,12,0	1/1:0,9:14:6.02:213,6,0	0/0:9,0:9:15.02:0,15,221	0/0:8,0:8:24.08:0,24,562	0/0:29,0:29:81.08:0,81,1544	0/0:5,0:5:11.99:0,12,187	0/0:3,0:3:8.92:0,9,157	0/0:10,0:10:14.99:0,15,256	1/1:1,6:8:12.04:425,12,0	1/1:0,6:8:18.95:525,19,0	0/0:6,0:6:14.90:0,15,154	1/1:1,1:2:3.01:107,3,0
chr10	48867454	.	AC	A	16211.14	PASS	AB=0.643;AC=53;AF=0.946;AN=56;BaseQRankSum=-3.422;DP=442;FS=2.275;HRun=1;HaplotypeScore=49.5875;InbreedingCoeff=0.4543;MQ=69.73;MQ0=0;MQRankSum=-3.361;QD=37.10;ReadPosRankSum=2.786;VQSLOD=5.1699;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,36:36:99:1385,99,0	1/1:0,3:3:9.03:126,9,0	0/1:4,5:8:0.95:131,0,1	0/0:4,1:5:0.71:0,1,28	1/1:0,27:27:69.23:964,69,0	1/1:0,15:15:42.14:587,42,0	1/1:0,5:5:15.05:210,15,0	1/1:0,24:24:69.22:947,69,0	1/1:0,10:10:27.09:378,27,0	1/1:0,20:20:54.16:737,54,0	1/1:1,19:20:54.14:723,54,0	1/1:0,19:19:48.13:671,48,0	1/1:0,10:10:27.09:378,27,0	1/1:0,10:10:21.07:294,21,0	1/1:0,14:14:36.12:503,36,0	1/1:0,9:9:21.07:294,21,0	1/1:0,32:32:90.30:1258,90,0	1/1:0,29:29:78.26:1091,78,0	1/1:0,13:13:39.13:545,39,0	1/1:0,18:18:48.14:671,48,0	1/1:0,11:11:33.11:462,33,0	1/1:0,8:8:21.04:273,21,0	1/1:0,13:13:27.06:377,27,0	1/1:0,20:20:60.20:839,60,0	1/1:0,15:15:39.13:545,39,0	1/1:1,13:14:42.11:566,42,0	1/1:0,23:23:63.21:881,63,0	1/1:0,10:10:27.09:377,27,0
chr10	48868043	.	T	TA	10899.65	PASS	AB=0.606;AC=37;AF=0.661;AN=56;BaseQRankSum=-10.080;DP=689;FS=8.040;HRun=9;HaplotypeScore=70.1824;InbreedingCoeff=0.9030;MQ=76.28;MQ0=1;MQRankSum=-1.830;QD=23.69;ReadPosRankSum=-0.365;VQSLOD=5.3767;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,144,1231	0/0:6,0:6:14.99:0,15,130	0/0:18,0:18:26.88:0,27,225	0/0:17,0:18:28.13:0,28,244	1/1:5,23:29:45.93:705,46,0	0/0:20,0:20:53.97:0,54,466	0/0:27,0:27:68.95:0,69,595	1/1:5,24:29:72.07:754,72,0	0/0:28,0:28:77.95:0,78,669	1/1:10,30:40:41.12:891,41,0	0/1:7,13:20:19.06:252,0,19	1/1:2,18:20:51.14:564,51,0	1/1:1,9:10:27.07:299,27,0	1/1:2,14:17:44.95:476,45,0	0/0:33,0:33:86.93:0,87,748	0/0:24,0:24:62.95:0,63,541	1/1:3,30:33:78.21:863,78,0	1/1:3,22:25:31.10:571,31,0	1/1:4,22:25:66:700,66,0	1/1:5,19:24:44.99:458,45,0	1/1:8,30:38:9.12:785,9,0	1/1:2,21:24:62.92:662,63,0	1/1:4,17:21:44.73:481,45,0	1/1:5,14:19:10.95:340,11,0	1/1:2,15:17:19.07:439,19,0	1/1:5,22:27:29.94:679,30,0	1/1:3,25:27:54.14:597,54,0	1/1:1,12:13:36.06:385,36,0
chr10	48869191	.	ATG	A	4614	PASS	AB=1.000;AC=37;AF=0.661;AN=56;BaseQRankSum=1.363;DP=596;FS=1.509;HRun=0;HaplotypeScore=114.9062;InbreedingCoeff=0.8116;MQ=60.16;MQ0=10;MQRankSum=-0.452;QD=12.47;ReadPosRankSum=4.363;VQSLOD=4.8956;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:45.15:0,45,639	0/0:12,0:12:12:0,12,133	0/0:31,0:11:9.02:0,9,114	0/0:41,0:23:31.12:0,31,289	1/1:20,0:21:17.86:150,18,0	0/0:17,0:17:30.10:0,30,425	0/0:33,0:33:43.34:0,43,812	1/1:12,0:12:11.97:125,12,0	0/0:23,0:22:42.06:0,42,512	1/1:25,0:27:51.12:570,51,0	1/1:8,0:9:17.88:149,18,0	1/1:18,0:16:24.63:194,25,0	1/1:11,0:11:5.13:100,5,0	1/1:4,0:14:20.77:153,21,0	0/0:19,0:18:39.12:0,39,513	0/0:23,0:23:9.27:0,9,360	1/1:28,0:28:54.01:570,54,0	1/1:6,0:11:5.97:55,6,0	1/1:19,1:18:27.08:322,27,0	1/1:11,1:12:24.02:259,24,0	1/1:16,24:40:6.02:69,6,0	0/1:26,0:26:29.10:263,0,29	1/1:14,0:14:7.08:264,7,0	1/1:40,0:40:42.78:622,43,0	1/1:10,0:22:23.76:183,24,0	1/1:18,0:20:32.97:351,33,0	1/1:8,12:20:9.03:109,9,0	1/1:4,0:4:9.03:105,9,0
chr10	48869204	.	TG	T	592.96	PASS	AB=0.870;AC=11;AF=0.196;AN=56;BaseQRankSum=5.154;DP=595;FS=0.000;HRun=1;HaplotypeScore=130.9060;InbreedingCoeff=0.0215;MQ=48.18;MQ0=23;MQRankSum=-2.347;QD=3.35;ReadPosRankSum=3.904;VQSLOD=0.1933;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:63.20:0,63,927	0/0:10,0:9:24.02:0,24,310	0/0:26,0:6:14.78:0,15,186	0/0:34,0:16:42.08:0,42,575	0/1:18,4:21:38.79:103,0,39	0/0:18,0:17:33.08:0,33,517	0/0:32,0:31:67.42:0,67,1014	0/1:8,4:11:26.56:72,0,27	0/0:23,0:22:45.62:0,46,692	0/1:22,7:28:99:181,0,200	0/1:10,1:11:30.58:31,0,37	0/0:23,0:20:38.76:0,39,334	0/0:12,0:12:30.04:0,30,307	1/1:11,3:14:7.74:31,8,0	0/0:17,0:16:39.13:0,39,622	0/0:23,0:23:36.04:0,36,503	0/1:27,2:27:89.57:183,0,90	0/1:9,1:10:7.97:8,0,118	0/0:23,0:19:29.82:0,30,251	0/0:10,0:10:13.44:0,13,50	0/0:33,0:32:10.18:0,10,121	0/0:30,0:30:35.37:0,35,299	0/0:17,0:17:24.64:0,25,186	0/0:43,0:43:57.18:0,57,455	0/1:17,5:20:2.03:20,0,2	0/1:19,4:21:88:88,0,195	0/0:15,0:15:11.99:0,12,111	0/1:5,0:4:25.47:25,0,27
chr10	48869206	.	TG	T	428.31	PASS	AB=0.866;AC=11;AF=0.196;AN=56;BaseQRankSum=5.899;DP=579;FS=2.739;HRun=1;HaplotypeScore=131.6329;InbreedingCoeff=-0.0124;MQ=47.42;MQ0=24;MQRankSum=-2.812;QD=2.49;ReadPosRankSum=4.599;VQSLOD=-0.1402;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:57.15:0,57,825	0/0:8,0:7:17.99:0,18,225	0/0:25,0:5:15.02:0,15,195	0/0:32,0:14:39.11:0,39,547	0/1:15,4:18:23.76:24,0,54	0/0:19,0:18:35.14:0,35,528	0/0:31,0:30:67.33:0,67,1000	0/1:7,4:9:39.61:46,0,40	0/0:23,0:22:45.58:0,46,649	0/1:20,7:26:99:135,0,206	0/1:10,1:11:29.19:29,0,40	0/0:21,0:18:34.21:0,34,246	0/0:10,0:10:23.88:0,24,223	1/1:11,3:14:4.60:22,5,0	0/0:17,0:16:41.81:0,42,629	0/0:22,0:22:29.87:0,30,440	0/1:26,2:26:96.66:182,0,97	0/1:10,1:11:6.64:7,0,115	0/0:23,0:19:23.30:0,23,299	0/0:12,0:12:13.27:0,13,44	0/0:33,0:32:12.17:0,12,107	0/0:29,0:29:32.29:0,32,250	0/0:18,0:18:24.53:0,25,179	0/0:42,0:42:56.73:0,57,434	0/1:18,5:21:3.23:17,0,3	0/1:19,4:21:86.55:87,0,182	0/0:14,0:14:6.86:0,7,42	0/1:5,0:4:22.11:26,0,22
chr10	48869211	.	T	TTGTG	717.07	PASS	AB=1.000;AC=22;AF=0.440;AN=50;BaseQRankSum=-3.357;DP=568;FS=2.524;HRun=0;HaplotypeScore=155.3213;InbreedingCoeff=0.1932;MQ=46.41;MQ0=26;MQRankSum=1.867;QD=2.25;ReadPosRankSum=-1.438;VQSLOD=2.0452;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:18,9:27:5.05:77,5,0	0/1:7,0:6:34.83:109,0,35	./.	./.	0/0:20,0:20:5.60:0,6,68	0/1:20,0:19:48.43:52,0,48	1/1:26,2:27:8.53:143,9,0	0/0:13,0:11:2.99:0,3,24	1/1:19,0:19:9.46:142,9,0	0/0:26,0:26:18.74:0,19,185	0/0:10,0:10:11.84:0,12,97	0/1:18,0:15:28.42:34,0,28	0/1:9,0:9:1.02:1,0,4	0/0:14,0:14:15.01:0,15,185	1/1:13,1:17:11.88:133,12,0	1/1:11,10:21:6.02:142,6,0	0/0:27,0:25:3.30:0,3,86	0/0:13,0:13:17.85:0,18,191	1/1:21,0:17:0.89:2,1,0	0/0:11,0:11:0.47:0,0,1	./.	0/1:30,0:30:7.36:7,0,26	0/1:19,0:19:5.30:5,0,27	0/1:42,0:42:6.77:7,0,145	0/0:24,0:22:11.99:0,12,136	0/1:24,0:22:7.84:8,0,169	1/1:14,0:14:0.47:1,0,0	0/0:5,0:4:1.25:0,1,3
chr10	48869338	.	C	CA	8720.76	PASS	AC=48;AF=0.923;AN=52;BaseQRankSum=2.752;DP=277;FS=5.251;HRun=2;HaplotypeScore=294.4566;InbreedingCoeff=0.5633;MQ=41.92;MQ0=1;MQRankSum=-0.995;QD=32.54;ReadPosRankSum=2.509;VQSLOD=3.6376;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,1:3:2.97:20,3,0	1/1:2,11:13:30.10:430,30,0	0/0:1,0:1:3.01:0,3,33	0/0:5,0:4:6.01:0,6,61	1/1:7,18:25:44.93:598,45,0	1/1:1,4:5:12:149,12,0	1/1:1,10:11:30.10:430,30,0	1/1:2,3:5:3.01:43,3,0	1/1:0,10:10:27.09:387,27,0	1/1:6,12:18:54.18:767,54,0	1/1:5,13:18:36.08:493,36,0	1/1:1,7:8:18.06:258,18,0	1/1:0,8:8:24.08:344,24,0	1/1:2,4:6:11.97:128,12,0	1/1:1,8:9:21.07:301,21,0	1/1:1,9:10:24.08:345,24,0	1/1:1,3:4:6.02:86,6,0	./.	1/1:4,2:6:12.04:162,12,0	1/1:9,20:29:78.10:1027,78,0	./.	1/1:3,17:20:48.08:641,48,0	1/1:3,13:16:39:490,39,0	1/1:0,3:3:9.03:129,9,0	1/1:2,9:11:24.08:344,24,0	1/1:3,11:14:36.12:507,36,0	1/1:4,10:14:39.13:554,39,0	1/1:0,2:2:6.02:86,6,0
chr10	48869448	.	CTCTCCTG	C	718.33	PASS	AB=1.000;AC=21;AF=0.750;AN=28;BaseQRankSum=2.693;DP=29;FS=2.969;HRun=0;HaplotypeScore=109.1324;InbreedingCoeff=0.3588;MQ=54.91;MQ0=0;MQRankSum=-0.867;QD=29.93;ReadPosRankSum=2.693;VQSLOD=3.5137;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	0/0:1,0:1:0.47:0,0,1	0/0:2,0:2:2.84:0,3,9	./.	./.	./.	./.	1/1:1,0:1:3.01:46,3,0	0/0:2,0:1:1.55:0,2,4	1/1:0,5:5:15.05:299,15,0	./.	1/1:1,0:1:3.01:37,3,0	1/1:1,0:1:0.89:2,1,0	./.	0/1:1,0:1:0:0,0,0	./.	1/1:2,0:2:6.02:74,6,0	1/1:3,0:3:1.55:4,2,0	./.	./.	1/1:0,1:1:3.01:48,3,0	./.	1/1:4,0:4:7.57:87,8,0	1/1:2,0:2:6.02:92,6,0	./.	1/1:3,0:3:8.77:110,9,0
chr10	48869459	.	G	GCAA	464.75	PASS	AB=1.000;AC=19;AF=0.792;AN=24;BaseQRankSum=1.323;DP=28;FS=2.831;HRun=0;HaplotypeScore=114.8299;InbreedingCoeff=0.3472;MQ=28.62;MQ0=0;MQRankSum=0.441;QD=19.36;ReadPosRankSum=0.819;VQSLOD=3.1380;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	0/1:2,0:2:0:0,0,0	./.	./.	./.	./.	1/1:1,0:1:3.01:36,3,0	./.	1/1:0,5:5:15.04:166,15,0	./.	1/1:1,0:1:3:27,3,0	0/0:1,0:1:2.88:0,3,15	./.	0/0:1,0:1:2.37:0,2,8	./.	1/1:2,0:2:6.02:69,6,0	1/1:3,0:3:2:5,2,0	./.	./.	1/1:0,1:1:3:28,3,0	./.	1/1:4,0:4:8.04:72,8,0	1/1:2,0:2:6.02:74,6,0	./.	1/1:3,0:3:6.02:73,6,0
chr10	48869463	.	AGGTG	A	849.05	PASS	AB=0.500;AC=22;AF=0.846;AN=26;BaseQRankSum=1.589;DP=28;FS=0.000;HRun=0;HaplotypeScore=112.5984;InbreedingCoeff=0.2593;MQ=28.62;MQ0=0;MQRankSum=1.445;QD=31.45;ReadPosRankSum=1.589;VQSLOD=3.4003;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	0/1:0,2:2:0.21:0,0,0	./.	./.	./.	./.	1/1:0,1:1:3.01:59,3,0	0/1:0,2:1:0:0,0,0	1/1:0,5:5:15.05:221,15,0	./.	1/1:0,1:1:3.01:60,3,0	1/1:1,0:1:2.50:9,2,0	./.	0/0:0,1:1:0.89:0,1,2	./.	1/1:0,2:2:6.02:107,6,0	1/1:0,3:3:5.37:21,5,0	./.	./.	1/1:0,1:1:3.01:42,3,0	./.	1/1:0,4:4:10.11:135,10,0	1/1:0,2:2:6.02:118,6,0	./.	1/1:0,3:3:9.03:149,9,0
chr10	48870686	.	T	TG	2001.66	PASS	AB=0.840;AC=19;AF=0.339;AN=56;BaseQRankSum=10.326;DP=565;FS=0.763;HRun=0;HaplotypeScore=102.8632;InbreedingCoeff=0.7232;MQ=48.53;MQ0=18;MQRankSum=-4.911;QD=8.10;ReadPosRankSum=7.488;VQSLOD=3.3610;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:42:99:0,105,826	0/0:2,0:2:2.93:0,3,19	0/1:20,0:6:7.70:8,0,31	0/0:12,0:6:8.19:0,8,92	1/1:9,10:19:12.95:163,13,0	0/0:18,0:18:50.20:0,50,358	0/0:23,0:20:36.84:0,37,245	0/1:20,9:27:95.93:187,0,96	0/0:12,0:12:31.17:0,31,219	1/1:20,13:32:11.68:338,12,0	1/1:13,8:18:25.93:199,26,0	0/0:15,0:15:38.47:0,38,315	0/0:16,0:15:38.87:0,39,332	1/1:3,17:20:16.40:169,16,0	0/0:19,0:18:26.58:0,27,210	0/0:18,0:18:37.92:0,38,296	1/1:17,12:27:50.78:348,51,0	1/1:8,10:17:26.14:221,26,0	0/0:19,0:17:46.39:0,46,340	0/0:21,0:21:55.64:0,56,366	0/0:11,0:10:23.19:0,23,142	0/0:22,0:22:55.88:0,56,425	0/0:13,0:13:34.49:0,34,286	0/0:31,0:31:38.64:0,39,354	1/1:10,9:16:22.39:204,22,0	0/1:21,10:30:69.36:264,0,69	0/0:22,0:22:57.92:0,58,368	1/1:4,4:6:17.58:105,18,0
chr10	48870688	.	T	TTTTG	5722.85	PASS	AB=0.874;AC=21;AF=0.375;AN=56;BaseQRankSum=9.080;DP=560;FS=6.557;HRun=0;HaplotypeScore=118.6194;InbreedingCoeff=0.5659;MQ=47.26;MQ0=18;MQRankSum=-4.290;QD=20.66;ReadPosRankSum=7.412;VQSLOD=3.5659;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:41:91.55:0,92,731	0/0:2,0:2:1.89:0,2,15	0/0:20,0:6:11.48:0,11,91	0/0:11,0:5:4.35:0,4,61	1/1:8,10:18:23.98:574,24,0	0/0:19,0:19:44.26:0,44,357	0/0:24,0:21:33.16:0,33,219	0/1:8,9:26:36.38:529,0,36	0/0:12,0:12:29.23:0,29,216	1/1:20,13:32:70.83:912,71,0	1/1:14,8:19:30.14:482,30,0	0/0:15,0:15:38.38:0,38,358	0/0:16,0:15:32.79:0,33,282	1/1:9,9:19:38.83:557,39,0	0/0:19,0:18:23.86:0,24,192	0/0:19,0:19:35.84:0,36,293	1/1:17,11:26:47.02:699,47,0	1/1:7,10:17:39.41:614,39,0	0/0:19,0:17:8.30:0,8,208	0/1:20,0:20:24.82:25,0,179	0/1:10,0:9:11.11:11,0,49	0/0:22,0:22:52.82:0,53,432	0/0:13,0:13:28.48:0,28,264	0/0:29,0:29:36.02:0,36,397	1/1:9,9:15:24.54:437,25,0	1/1:20,10:29:9.91:698,10,0	0/1:22,0:22:30.05:30,0,201	0/1:8,3:9:9.53:156,0,10
chr10	48871742	.	TA	T	2732.43	PASS	AB=0.929;AC=21;AF=0.375;AN=56;BaseQRankSum=0.106;DP=336;FS=2.734;HRun=9;HaplotypeScore=41.4345;InbreedingCoeff=0.9099;MQ=74.95;MQ0=1;MQRankSum=-0.124;QD=17.98;ReadPosRankSum=0.838;VQSLOD=3.4344;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,102,1125	0/0:6,0:6:15.03:0,15,163	0/0:19,0:9:8.20:0,8,42	0/1:12,0:9:6.29:6,0,73	1/1:3,12:15:30.01:274,30,0	0/0:9,0:9:24.06:0,24,269	0/0:11,0:11:30.07:0,30,336	1/1:3,16:19:43.14:392,43,0	0/0:7,0:7:18.03:0,18,188	1/1:2,7:9:21.01:192,21,0	1/1:3,14:17:35.94:319,36,0	0/0:14,0:14:36.10:0,36,408	0/0:7,0:7:21.05:0,21,233	1/1:0,10:10:24.01:219,24,0	0/0:7,0:7:15.03:0,15,163	0/0:6,0:6:15.03:0,15,163	1/1:1,18:19:45.02:411,45,0	1/1:0,16:16:39.02:356,39,0	0/0:8,0:8:21.05:0,21,234	0/0:11,0:11:30.05:0,30,324	0/0:9,0:9:24.06:0,24,268	0/0:6,0:6:11.89:0,12,109	0/0:9,0:9:24.06:0,24,267	0/0:6,0:6:15.03:0,15,164	1/1:0,10:10:27.01:247,27,0	1/1:1,10:11:29.95:260,30,0	0/0:14,0:14:33.09:0,33,372	1/1:1,12:13:30.02:274,30,0
chr10	48872253	.	TCA	T	216.10	PASS	AB=1.000;AC=17;AF=0.354;AN=48;BaseQRankSum=-1.482;DP=395;FS=7.297;HRun=0;HaplotypeScore=86.3884;InbreedingCoeff=-0.0466;MQ=38.12;MQ0=64;MQRankSum=-0.067;QD=0.95;ReadPosRankSum=-1.332;VQSLOD=0.7782;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:31:12.28:0,12,112	0/1:9,0:8:12.86:13,0,36	./.	./.	0/1:13,0:11:6.93:7,0,18	0/1:23,0:21:49.34:49,0,133	0/1:35,0:26:6.35:6,0,59	1/1:12,8:17:22.75:130,23,0	0/1:23,0:16:20.23:40,0,20	0/0:11,0:6:8.18:0,8,50	0/1:15,0:11:7.15:7,0,7	0/1:7,0:6:9.58:10,0,12	0/0:11,0:7:2.74:0,3,12	0/1:13,0:10:3.89:4,0,34	0/0:26,0:22:23.70:0,24,174	0/1:16,0:14:6.49:6,0,101	0/1:19,0:17:3.43:3,0,73	0/0:12,0:8:7.76:0,8,36	0/0:12,0:10:8.25:0,8,38	1/1:10,0:9:2.99:24,3,0	0/0:6,0:3:2.96:0,3,19	./.	0/0:12,0:10:2.99:0,3,23	1/1:13,0:11:2.90:16,3,0	0/0:6,0:4:2.37:0,2,8	0/0:10,0:6:10.94:0,11,69	0/1:12,0:10:4.35:37,0,4	./.
chr10	48872311	.	A	AATC	1343.39	PASS	AB=0.969;AC=16;AF=0.286;AN=56;BaseQRankSum=6.509;DP=468;FS=15.566;HRun=0;HaplotypeScore=108.9512;InbreedingCoeff=0.5841;MQ=64.21;MQ0=32;MQRankSum=-6.047;QD=11.58;ReadPosRankSum=-3.548;VQSLOD=1.6889;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:29:66.09:0,66,1215	0/0:7,0:6:18.06:0,18,305	0/0:30,0:14:22.31:0,22,553	0/0:34,0:19:34.06:0,34,510	0/0:21,0:18:30.10:0,30,550	0/0:25,0:22:54.19:0,54,1003	0/0:14,0:13:30.08:0,30,472	0/0:33,0:27:77.91:0,78,1242	0/0:23,0:21:51.17:0,51,915	0/0:19,0:18:48.57:0,49,806	0/0:11,0:9:9.03:0,9,165	1/1:6,0:6:0.83:25,1,0	1/1:8,0:8:1.71:15,2,0	0/1:13,0:13:5.84:6,0,153	0/0:11,0:11:23.82:0,24,447	0/0:11,0:11:30.10:0,30,548	0/0:17,0:17:35.79:0,36,512	0/0:15,0:14:35.82:0,36,561	0/1:15,0:13:79.60:332,0,80	1/1:19,0:18:20.18:356,20,0	0/1:6,0:5:11.93:29,0,12	1/1:14,0:12:8.75:50,9,0	1/1:11,4:13:29.99:439,30,0	1/1:4,0:4:5.87:35,6,0	0/0:18,0:13:30.10:0,30,537	0/0:18,0:15:42.02:0,42,652	0/1:12,0:11:0.93:228,0,1	0/0:14,0:14:26.86:0,27,492
chr10	48872312	.	G	GAATCA	3504.40	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=3.676;DP=490;FS=1.805;HRun=0;HaplotypeScore=121.0491;InbreedingCoeff=0.8227;MQ=65.75;MQ0=28;MQRankSum=-8.535;QD=25.39;ReadPosRankSum=-5.356;VQSLOD=2.1982;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:29:65.85:0,66,1348	0/0:7,0:6:18.06:0,18,361	0/0:32,0:16:17.10:0,17,598	0/0:34,0:19:24.89:0,25,515	0/0:21,0:18:33.09:0,33,626	0/0:23,0:21:51.17:0,51,1043	0/0:14,0:14:27.08:0,27,484	0/0:36,0:30:66.22:0,66,1312	0/0:20,0:20:54.17:0,54,1052	0/0:19,0:18:33.02:0,33,809	0/0:13,0:11:9.03:0,9,183	1/1:3,0:6:6.02:102,6,0	1/1:7,0:10:10.27:142,10,0	0/1:13,0:13:17.68:18,0,172	0/0:10,0:10:23.41:0,23,455	0/0:10,0:10:27.09:0,27,552	0/0:17,0:17:19.36:0,19,488	0/0:14,0:14:28.25:0,28,554	1/1:12,0:20:42.13:1137,42,0	1/1:9,11:19:26.92:649,27,0	1/1:5,4:7:3.01:53,3,0	1/1:7,0:18:12.03:139,12,0	1/1:14,4:16:36.08:687,36,0	1/1:2,2:4:2.98:22,3,0	0/0:18,0:13:30.10:0,30,593	0/0:19,0:16:38.56:0,39,691	1/1:6,7:12:24.55:555,25,0	0/0:14,0:14:29.77:0,30,539
chr10	48872446	.	C	CTTT	6844.17	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=13.627;DP=509;FS=0.808;HRun=8;HaplotypeScore=108.4225;InbreedingCoeff=0.9942;MQ=83.18;MQ0=2;MQRankSum=-13.269;QD=43.32;ReadPosRankSum=-3.825;VQSLOD=3.9298;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:84.26:0,84,1097	0/0:12,0:12:36.12:0,36,473	0/0:37,0:32:24.16:0,24,530	0/0:34,0:24:44.42:0,44,470	1/1:3,15:20:51.17:972,51,0	0/0:26,0:26:72.20:0,72,927	0/0:12,0:12:33.10:0,33,434	1/1:10,22:33:75.25:1444,75,0	0/0:17,0:18:49.75:0,50,668	1/1:4,10:14:33.11:666,33,0	1/1:2,7:12:27.07:460,27,0	0/0:8,0:8:24.06:0,24,301	0/0:8,0:8:21.07:0,21,276	1/1:2,7:10:27.03:460,27,0	0/0:16,0:16:36.09:0,36,473	0/0:9,0:8:27.07:0,27,339	1/1:3,10:13:27.09:518,27,0	1/1:4,5:11:24.06:429,24,0	0/0:19,0:19:42.11:0,42,550	0/0:28,0:28:78.22:0,78,995	0/0:22,0:22:57.16:0,57,734	0/0:9,0:9:15.02:0,15,197	0/0:27,0:27:63.14:0,63,827	0/0:14,0:14:39.11:0,39,513	1/1:8,9:18:39.09:679,39,0	1/1:1,14:19:50.60:897,51,0	0/0:19,0:19:45.10:0,45,591	1/1:2,4:6:18.06:320,18,0
chr10	48872798	.	GCACACACACACACACA	G	2289.66	PASS	AB=0.834;AC=12;AF=0.222;AN=54;BaseQRankSum=6.368;DP=491;FS=14.123;HRun=0;HaplotypeScore=180.7552;InbreedingCoeff=0.3431;MQ=62.72;MQ0=15;MQRankSum=-6.564;QD=18.32;ReadPosRankSum=3.041;VQSLOD=1.6235;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:27.07:0,27,1482	0/0:5,0:8:3.01:0,3,115	./.	0/0:34,0:18:3.01:0,3,36	0/0:13,0:13:9.03:0,9,517	0/0:14,0:13:2.13:0,2,169	0/0:19,0:27:36.10:0,36,1604	0/0:23,0:22:21.07:0,21,560	0/0:14,0:23:21.04:0,21,838	0/0:20,0:20:39.11:0,39,1818	0/0:12,0:13:4.19:0,4,322	1/1:13,9:23:16.38:893,16,0	1/1:8,7:16:11.68:505,12,0	0/0:10,0:10:5.99:0,6,405	0/0:15,0:16:26.79:0,27,923	0/0:9,0:12:15.05:0,15,735	0/0:25,0:26:21.07:0,21,1223	0/0:20,0:20:18.06:0,18,1002	0/1:15,0:14:42.59:43,0,105	0/1:10,0:13:38.03:131,0,38	0/0:23,0:19:11.99:0,12,155	1/1:5,5:10:8.99:202,9,0	0/1:11,6:17:13.49:99,0,13	1/1:13,0:13:0.47:1,0,0	0/0:15,0:15:9.03:0,9,547	0/0:18,0:18:18.06:0,18,903	0/1:13,4:17:45.21:566,0,45	0/0:5,0:4:12.04:0,12,717
chr10	48872803	.	C	CAT	1911.75	PASS	AB=0.675;AC=16;AF=0.286;AN=56;BaseQRankSum=-5.900;DP=505;FS=4.754;HRun=0;HaplotypeScore=90.2653;InbreedingCoeff=0.6135;MQ=56.47;MQ0=15;MQRankSum=2.904;QD=10.86;ReadPosRankSum=0.458;VQSLOD=3.1818;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:41.95:0,42,383	0/0:8,0:8:11.85:0,12,85	0/0:22,0:16:46.75:0,47,401	0/0:32,0:16:42:0,42,400	0/1:12,0:12:16.91:110,0,17	0/0:18,0:17:24.43:0,24,196	0/0:30,0:29:62.87:0,63,512	1/1:23,0:21:48.32:460,48,0	0/0:24,0:24:34.93:0,35,288	0/1:5,19:24:5.04:361,0,5	1/1:14,1:14:14.74:144,15,0	0/0:22,0:22:46.39:0,46,332	0/0:15,0:15:28.42:0,28,192	1/1:4,8:12:6.02:115,6,0	0/0:17,0:17:41:0,41,308	0/0:14,0:13:29.95:0,30,244	0/1:7,19:29:52.04:126,0,52	0/1:5,13:19:78.84:95,0,79	0/0:15,0:14:31.91:0,32,240	0/0:10,0:10:20.92:0,21,164	0/0:29,0:25:32.89:0,33,259	0/0:8,0:8:11.85:0,12,118	0/0:14,0:14:8.75:0,9,70	0/0:12,0:12:17.93:0,18,141	1/1:2,12:15:8.95:171,9,0	1/1:4,15:20:17.75:377,18,0	0/0:19,0:18:47.69:0,48,359	1/1:5,0:4:11.99:138,12,0
chr10	48874728	.	A	AT	4541.55	PASS	AB=0.625;AC=19;AF=0.339;AN=56;BaseQRankSum=-11.640;DP=565;FS=7.924;HRun=10;HaplotypeScore=54.8861;InbreedingCoeff=0.9081;MQ=63.52;MQ0=3;MQRankSum=-0.506;QD=23.78;ReadPosRankSum=-1.252;VQSLOD=5.0075;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,2:29:45.92:0,46,583	0/0:8,0:8:23.97:0,24,197	0/0:13,0:7:8.96:0,9,70	0/0:12,0:10:24.05:0,24,173	1/1:5,17:22:45.07:463,45,0	0/0:27,0:26:74.89:0,75,616	0/0:20,0:19:44.93:0,45,369	1/1:10,20:29:57.09:588,57,0	0/0:23,0:24:56.92:0,57,468	1/1:5,15:20:38.90:481,39,0	1/1:1,20:21:54.14:575,54,0	0/0:15,0:15:38.94:0,39,319	0/0:16,0:16:35.92:0,36,296	1/1:2,21:23:56.53:606,57,0	0/0:27,0:27:65.89:0,66,542	0/0:29,0:29:80.86:0,81,656	1/1:4,22:25:57.14:608,57,0	1/1:0,8:8:18.05:192,18,0	0/0:19,0:19:35.89:0,36,296	0/0:30,0:30:80.87:0,81,661	0/0:10,0:10:23.97:0,24,197	0/0:19,0:19:56.90:0,57,462	0/0:16,0:16:38.92:0,39,317	0/0:31,0:31:74.80:0,75,605	1/1:1,6:7:18.05:192,18,0	1/1:3,25:29:75:772,75,0	0/0:29,0:28:65.88:0,66,538	0/1:2,2:5:34.41:63,0,34
chr10	48875033	.	A	AC	15408.38	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-13.465;DP=581;FS=0.000;HRun=3;HaplotypeScore=54.5288;InbreedingCoeff=0.9983;MQ=77.30;MQ0=0;MQRankSum=-2.607;QD=37.22;ReadPosRankSum=2.861;VQSLOD=5.1334;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:60.18:0,60,719	0/0:9,0:9:27.08:0,27,324	0/0:18,0:19:44.89:0,45,512	0/0:12,1:13:19.08:0,19,307	1/1:1,38:39:99:1468,105,0	0/0:28,0:28:84.26:0,84,1007	0/0:20,0:20:57.16:0,57,671	1/1:5,35:40:99:1403,102,0	0/0:22,0:22:60.17:0,60,709	1/1:0,26:26:78.26:1086,78,0	1/1:1,25:26:78.26:1085,78,0	1/1:2,12:14:33.11:462,33,0	1/1:1,12:13:30.10:420,30,0	1/1:0,14:14:39.13:546,39,0	0/0:17,0:17:48.13:0,48,565	0/0:17,0:17:48.13:0,48,564	1/1:1,11:12:30.10:420,30,0	1/1:2,15:17:45.15:630,45,0	1/1:3,17:20:51.17:710,51,0	1/1:1,24:25:69.23:966,69,0	1/1:1,11:12:33.11:462,33,0	1/1:0,17:17:48.16:671,48,0	1/1:0,28:28:75.25:1047,75,0	1/1:0,14:14:42.14:588,42,0	1/1:2,19:21:54.18:756,54,0	1/1:2,30:32:90.30:1260,90,0	1/1:0,35:35:78.14:1092,78,0	1/1:0,9:9:24.08:336,24,0
chr10	48876677	.	GAGAA	G	1000.23	PASS	AB=0.856;AC=28;AF=0.583;AN=48;BaseQRankSum=1.512;DP=389;FS=5.854;HRun=0;HaplotypeScore=55.2260;InbreedingCoeff=0.3740;MQ=35.05;MQ0=85;MQRankSum=3.333;QD=4.22;ReadPosRankSum=1.092;VQSLOD=0.4553;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:25:1.55:0,2,105	0/0:2,0:2:5.85:0,6,44	./.	0/0:10,0:3:3.85:0,4,12	1/1:19,1:14:1.18:3,1,0	0/0:22,0:14:9.81:0,10,62	0/0:26,0:18:22.82:0,23,252	0/1:30,0:22:32.55:33,0,95	0/0:11,0:6:11.47:0,11,107	0/1:10,8:12:15.65:122,0,16	./.	1/1:4,0:2:2.22:7,2,0	1/1:7,0:3:8.92:64,9,0	0/1:7,4:5:3.16:32,0,3	0/1:10,0:8:4.41:9,0,4	0/0:15,0:12:14.15:0,14,121	1/1:24,0:14:12.59:123,13,0	1/1:20,0:9:26.74:187,27,0	1/1:8,0:2:3:28,3,0	0/0:10,0:5:1.98:0,2,6	1/1:16,0:10:5.99:49,6,0	./.	./.	1/1:23,0:10:20.95:168,21,0	1/1:8,0:6:1.78:57,2,0	1/1:19,0:15:3.85:153,4,0	1/1:8,0:3:5.99:49,6,0	1/1:8,3:5:2.43:69,2,0
chr10	48876681	.	AAGAGAG	A	867.10	PASS	AB=0.974;AC=14;AF=0.292;AN=48;BaseQRankSum=1.851;DP=396;FS=5.401;HRun=0;HaplotypeScore=65.9165;InbreedingCoeff=0.2503;MQ=40.05;MQ0=68;MQRankSum=2.946;QD=5.22;ReadPosRankSum=1.019;VQSLOD=0.9175;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:28:31.69:0,32,338	0/0:2,0:2:6.02:0,6,90	./.	0/1:16,0:5:15.85:16,0,25	1/1:8,14:16:20.47:143,20,0	0/0:21,0:16:15:0,15,194	0/0:25,0:19:21:0,21,386	0/1:22,5:20:99:139,0,99	0/0:11,0:8:13.27:0,13,223	0/1:17,0:11:19.47:80,0,19	./.	0/0:5,0:4:8.67:0,9,60	0/0:10,0:7:6.93:0,7,54	0/1:10,0:6:4.22:15,0,4	0/0:11,0:9:4.37:0,4,37	0/0:14,0:12:15.01:0,15,199	1/1:20,0:11:4.14:221,4,0	1/1:19,0:10:17.03:263,17,0	0/0:8,0:3:3:0,3,28	0/0:7,0:3:2.99:0,3,24	0/0:21,0:15:6.46:0,6,50	./.	./.	0/0:24,0:12:10.81:0,11,77	1/1:5,0:3:3:26,3,0	0/1:19,0:15:3.36:91,0,3	0/0:11,0:6:6.46:0,6,50	0/1:11,0:5:23.31:23,0,28
chr10	48878930	.	CAGGG	C	5598.56	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=7.516;DP=471;FS=56.128;HRun=0;HaplotypeScore=97.0564;InbreedingCoeff=0.9960;MQ=71.43;MQ0=0;MQRankSum=-12.205;QD=41.47;ReadPosRankSum=0.092;VQSLOD=2.8913;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:90.07:0,90,2258	0/0:7,0:7:21.07:0,21,550	0/0:20,0:19:42.14:0,42,1031	0/0:16,0:17:36.10:0,36,899	0/0:19,0:19:51.16:0,51,1276	0/0:15,0:15:33.11:0,33,865	0/0:19,0:19:48.16:0,48,1236	0/0:24,0:24:69.24:0,69,1788	0/0:14,0:14:39.13:0,39,1021	0/0:22,0:22:63.21:0,63,1538	0/0:12,0:12:33.11:0,33,863	1/1:3,12:15:36.12:647,36,0	1/1:1,10:11:27.09:485,27,0	0/0:17,0:17:51.18:0,51,1305	0/0:16,0:16:42.14:0,42,1101	0/0:11,0:11:27.09:0,27,707	0/0:23,0:23:57.20:0,57,1468	0/0:17,0:17:42.14:0,42,1099	1/1:4,16:20:48.15:817,48,0	1/1:3,15:18:45.15:800,45,0	1/1:5,7:12:27.05:325,27,0	1/1:1,14:15:42.14:710,42,0	1/1:2,13:15:36.12:637,36,0	1/1:0,8:8:15.94:257,16,0	0/0:19,0:19:54.19:0,54,1414	0/0:20,0:20:51.18:0,51,1295	1/1:4,17:21:51.17:921,51,0	0/0:9,0:9:21.07:0,21,535
chr10	48878952	.	GT	G	3057.58	PASS	AB=0.947;AC=29;AF=0.518;AN=56;BaseQRankSum=-0.366;DP=446;FS=0.965;HRun=11;HaplotypeScore=89.6662;InbreedingCoeff=0.8727;MQ=60.07;MQ0=6;MQRankSum=-0.188;QD=12.13;ReadPosRankSum=1.932;VQSLOD=3.6673;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:32:72:0,72,742	0/0:7,0:7:15.04:0,15,160	0/1:17,1:7:10.90:11,0,74	0/0:27,0:15:14.66:0,15,139	1/1:2,12:14:32.94:271,33,0	0/0:12,0:12:26.05:0,26,250	0/0:14,0:14:18.04:0,18,191	1/1:7,14:21:30.30:309,30,0	0/0:15,0:15:27.01:0,27,267	1/1:14,7:22:10.14:200,10,0	1/1:2,7:9:17.96:148,18,0	0/0:11,0:10:12.40:0,12,107	0/0:13,0:12:20.68:0,21,191	1/1:11,6:17:20.66:159,21,0	0/0:19,0:19:30.04:0,30,307	0/0:11,0:11:21.05:0,21,224	1/1:4,17:22:5.98:245,6,0	1/1:9,6:14:8:138,8,0	1/1:11,13:24:11.62:283,12,0	1/1:8,10:18:31.94:252,32,0	1/1:1,5:6:14.98:123,15,0	0/0:13,0:13:23.89:0,24,238	0/0:14,0:13:24.02:0,24,243	0/0:5,0:5:9.02:0,9,96	1/1:2,14:16:38.95:320,39,0	1/1:3,16:19:44.92:369,45,0	1/1:7,14:21:41.89:345,42,0	1/1:4,4:8:14.64:109,15,0
chr10	48880899	.	AAC	A	2902.11	PASS	AB=0.920;AC=12;AF=0.214;AN=56;BaseQRankSum=11.173;DP=859;FS=0.853;HRun=0;HaplotypeScore=117.0024;InbreedingCoeff=0.5813;MQ=59.05;MQ0=12;MQRankSum=-0.750;QD=12.84;ReadPosRankSum=1.892;VQSLOD=3.6554;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:54,1:55:96.01:0,96,1989	0/1:9,1:10:5.63:6,0,402	0/0:41,0:10:5.94:0,6,43	0/0:47,0:19:11.16:0,11,119	0/0:29,0:29:27.30:0,27,900	0/0:18,0:18:42.14:0,42,657	0/0:33,1:34:50.88:0,51,1319	0/0:52,1:52:50.86:0,51,1227	0/0:41,1:42:71.83:0,72,1655	0/0:43,0:43:90.31:0,90,1440	0/0:22,1:23:17.78:0,18,786	0/1:20,2:22:18.64:19,0,668	0/0:15,0:15:42.14:0,42,677	0/0:24,0:23:66.22:0,66,1043	0/0:26,1:27:35.83:0,36,1056	0/0:10,0:10:21.07:0,21,339	0/1:30,2:32:6.45:6,0,1035	0/0:18,0:18:45.11:0,45,686	1/1:10,16:24:39.12:473,39,0	1/1:4,16:19:45.61:546,46,0	1/1:15,49:63:99:1517,129,0	0/0:31,0:30:66.18:0,66,1014	0/0:23,1:24:21.34:0,21,806	0/0:48,0:48:99:0,108,1712	0/1:28,3:32:33.98:34,0,988	0/0:30,0:31:80:0,80,1162	1/1:3,15:18:38.86:472,39,0	0/0:18,1:19:14.26:0,14,726
chr10	48880940	.	CACACACACAG	C	531.69	PASS	AB=0.929;AC=7;AF=0.125;AN=56;BaseQRankSum=6.951;DP=952;FS=0.000;HRun=0;HaplotypeScore=250.8170;InbreedingCoeff=0.5683;MQ=49.19;MQ0=36;MQRankSum=-4.031;QD=3.28;ReadPosRankSum=-0.589;VQSLOD=2.3824;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:53:96.20:0,96,3113	0/0:6,0:6:6.91:0,7,264	0/0:51,0:4:5.99:0,6,66	0/0:49,0:4:2.80:0,3,51	0/0:28,0:26:45.15:0,45,1739	0/0:17,0:17:32.93:0,33,1141	0/0:43,0:42:75.23:0,75,2550	0/0:52,0:42:48.04:0,48,1193	0/0:42,0:40:60.18:0,60,1973	0/0:44,0:42:70.45:0,70,2243	0/0:26,0:26:51.18:0,51,1925	0/0:29,0:29:51.11:0,51,1809	0/0:14,0:14:23.91:0,24,754	0/0:28,0:26:48.15:0,48,1882	0/0:28,0:28:39.13:0,39,1565	0/0:15,0:15:33.11:0,33,1117	0/0:33,0:33:56.69:0,57,2360	0/0:21,0:21:11.55:0,12,1295	1/1:22,2:15:3.01:90,3,0	1/1:11,9:20:15.32:140,15,0	1/1:68,37:98:0.36:129,0,0	0/0:34,0:34:54.18:0,54,1463	0/0:17,0:17:31.83:0,32,986	0/0:72,0:71:99:0,126,5276	0/0:30,0:30:54.18:0,54,2100	0/0:34,0:32:66.15:0,66,1974	0/1:12,1:13:33.94:295,0,34	0/0:21,0:21:45.09:0,45,1763
chr10	48881197	.	CACAG	C	1322.45	PASS	AB=0.766;AC=8;AF=0.143;AN=56;BaseQRankSum=7.315;DP=920;FS=13.534;HRun=0;HaplotypeScore=174.5826;InbreedingCoeff=0.5470;MQ=48.23;MQ0=58;MQRankSum=-2.732;QD=7.19;ReadPosRankSum=-1.659;VQSLOD=1.9913;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:46:99:0,107,2570	0/0:8,0:7:17.26:0,17,279	0/0:19,0:2:2.92:0,3,17	0/0:43,0:6:3.01:0,3,35	0/0:25,0:25:42.11:0,42,856	0/0:24,0:23:50.59:0,51,1145	0/0:52,0:48:99:0,113,2421	0/0:64,0:41:99:0,108,1903	0/0:41,0:37:94.75:0,95,2017	0/0:51,0:46:99:0,124,2568	0/0:27,0:24:59.74:0,60,1436	0/1:24,0:22:75.77:76,0,305	0/0:27,0:26:30.75:0,31,966	0/0:26,0:25:68.96:0,69,1608	0/0:26,0:24:62.86:0,63,1440	0/0:26,0:24:36.45:0,36,631	0/0:43,0:42:83.17:0,83,2221	0/0:34,0:33:90.16:0,90,1977	1/1:29,4:11:5.70:394,6,0	1/1:6,19:23:6.15:114,6,0	1/1:67,18:64:46.69:677,47,0	0/0:25,0:25:13.95:0,14,444	0/0:17,0:17:7.80:0,8,291	0/0:43,0:40:26.68:0,27,443	0/0:16,0:15:33.10:0,33,814	0/0:33,0:31:87.24:0,87,1702	0/1:2,15:15:19.53:201,0,20	0/0:19,0:17:34.95:0,35,937
chr10	48881199	.	CAG	C	709.57	PASS	AB=0.955;AC=12;AF=0.214;AN=56;BaseQRankSum=10.197;DP=906;FS=4.680;HRun=0;HaplotypeScore=153.6615;InbreedingCoeff=0.1337;MQ=48.33;MQ0=59;MQRankSum=-4.387;QD=2.26;ReadPosRankSum=-3.038;VQSLOD=2.0356;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:46:95.40:0,95,1887	0/0:8,0:7:17.11:0,17,187	0/0:16,0:2:2.92:0,3,17	0/0:38,0:5:3.01:0,3,36	0/0:23,0:23:41.69:0,42,645	0/0:24,0:23:28.97:0,29,785	0/0:53,0:49:99:0,116,1923	0/0:65,0:40:99:0,111,1585	0/0:41,0:37:93.73:0,94,1495	0/0:51,0:47:99:0,110,1937	0/0:27,0:24:59.20:0,59,1053	0/1:23,1:22:99:131,0,273	0/1:25,2:26:18.42:18,0,728	0/0:26,0:25:68.99:0,69,1208	0/0:25,0:23:62.81:0,63,1059	0/0:26,0:24:25.47:0,25,484	0/0:41,0:40:64.39:0,64,1541	0/0:34,0:33:90.13:0,90,1472	0/1:32,0:10:13.47:180,0,13	1/1:24,0:23:6.25:41,6,0	1/1:84,0:64:48.91:370,49,0	0/1:24,1:25:20.27:20,0,339	0/1:15,3:18:5.68:6,0,259	0/1:43,1:41:15.41:15,0,332	0/0:14,0:14:33.10:0,33,602	0/0:33,0:31:86.99:0,87,1324	0/1:17,0:15:21.68:77,0,22	0/1:18,1:17:0.21:0,0,619
chr10	48881229	.	GAC	G	1495.42	PASS	AB=0.949;AC=15;AF=0.268;AN=56;BaseQRankSum=6.706;DP=928;FS=7.137;HRun=0;HaplotypeScore=156.2666;InbreedingCoeff=0.5089;MQ=50.00;MQ0=39;MQRankSum=0.847;QD=5.12;ReadPosRankSum=-0.331;VQSLOD=2.6235;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:55:75.10:0,75,1490	0/0:11,0:11:18.45:0,18,256	0/0:32,0:9:11.95:0,12,119	0/0:37,0:13:20.34:0,20,155	0/1:24,1:25:12.54:13,0,548	0/0:25,0:25:44.67:0,45,569	0/0:43,0:41:75.24:0,75,1154	0/1:44,2:27:60.42:60,0,448	0/0:41,1:39:26.78:0,27,1103	0/0:47,0:41:23.56:0,24,874	0/0:27,0:27:55.91:0,56,761	1/1:8,17:24:38.77:461,39,0	1/1:7,12:19:23.19:234,23,0	0/0:31,4:35:51.75:0,52,1271	0/0:34,1:34:13.65:0,14,1088	0/0:21,1:22:3.43:0,3,481	0/1:42,1:43:69.21:69,0,821	0/0:25,0:25:39.10:0,39,685	0/0:24,0:14:28.27:0,28,373	0/1:23,4:27:51.03:51,0,440	0/0:83,1:67:36.55:0,37,976	1/1:8,21:29:26.49:296,26,0	1/1:2,16:18:11.67:143,12,0	1/1:33,8:38:27.40:314,27,0	0/0:18,1:19:36.12:0,36,543	0/0:48,0:48:43.34:0,43,1412	0/0:22,0:19:33:0,33,458	0/1:16,0:15:39.57:40,0,371
chr10	48882097	.	A	AT	1919.83	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=5.064;DP=482;FS=3.329;HRun=2;HaplotypeScore=78.6523;InbreedingCoeff=0.8948;MQ=72.51;MQ0=1;MQRankSum=1.114;QD=12.07;ReadPosRankSum=0.189;VQSLOD=2.1885;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:16:38.95:0,39,360	0/0:8,0:8:16.25:0,16,142	0/0:23,0:14:28.32:0,28,222	0/1:12,0:9:9.08:9,0,67	0/0:26,0:26:62.32:0,62,538	0/0:22,0:22:58.49:0,58,493	0/0:11,0:11:17.96:0,18,154	0/0:26,0:26:62.73:0,63,606	0/0:16,0:16:43.06:0,43,350	0/0:26,0:26:65.80:0,66,634	0/0:17,0:17:43.95:0,44,383	1/1:2,6:8:8.89:89,9,0	1/1:2,13:15:5.74:61,6,0	0/0:13,0:13:26.98:0,27,233	0/0:13,0:13:38.97:0,39,339	0/0:23,0:23:55.26:0,55,467	0/0:16,0:16:46.20:0,46,404	0/0:12,0:12:29.94:0,30,254	1/1:23,0:23:48.53:319,49,0	1/1:22,0:22:58.73:410,59,0	1/1:12,0:12:26.69:195,27,0	1/1:2,12:15:32.53:309,33,0	1/1:1,21:22:21.21:159,21,0	1/1:8,0:8:14.99:130,15,0	0/0:16,0:16:33.02:0,33,310	0/0:25,0:25:58.83:0,59,530	1/1:22,0:22:61.97:448,62,0	0/0:11,0:11:21.79:0,22,182
chr10	48883475	.	AAAAC	A	2290.69	PASS	AB=0.918;AC=11;AF=0.196;AN=56;BaseQRankSum=10.538;DP=623;FS=3.246;HRun=0;HaplotypeScore=103.1899;InbreedingCoeff=0.6206;MQ=75.40;MQ0=2;MQRankSum=-4.068;QD=17.90;ReadPosRankSum=3.313;VQSLOD=3.4476;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:53.11:0,53,1071	0/0:6,0:6:18.06:0,18,437	0/0:36,0:32:33.11:0,33,682	0/0:31,0:23:20.55:0,21,422	0/0:31,0:31:66.23:0,66,1535	0/0:32,0:31:84.29:0,84,2029	0/0:18,0:18:27.09:0,27,650	0/0:27,0:27:30.10:0,30,713	0/0:22,0:22:54.19:0,54,1299	0/0:26,1:27:2.35:0,2,1050	0/0:25,1:26:2.41:0,2,1054	0/0:21,0:21:51.18:0,51,1238	0/0:13,0:13:27.09:0,27,655	0/0:20,0:20:42.14:0,42,1003	0/0:23,0:23:33.11:0,33,778	0/0:18,0:18:39.12:0,39,899	0/0:31,2:33:8.38:0,8,1256	0/1:14,2:16:15.70:16,0,695	1/1:6,5:11:14.55:243,15,0	1/1:5,19:25:54.05:792,54,0	1/1:5,12:17:30.10:488,30,0	0/0:23,0:23:57.18:0,57,1233	0/0:18,0:18:45.15:0,45,1092	0/0:17,0:17:39.13:0,39,946	0/1:17,1:18:0.65:1,0,1038	0/0:27,1:28:17.45:0,17,1477	1/1:12,18:30:57.15:898,57,0	0/1:10,1:11:17.78:18,0,620
chr10	48883736	.	A	AAC	695.60	PASS	AB=0.833;AC=26;AF=0.500;AN=52;BaseQRankSum=0.439;DP=291;FS=10.952;HRun=0;HaplotypeScore=71.9706;InbreedingCoeff=0.5227;MQ=60.59;MQ0=6;MQRankSum=-2.140;QD=5.11;ReadPosRankSum=-4.619;VQSLOD=-0.1552;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:21:9.49:0,9,93	0/0:3,0:5:8.48:0,8,41	./.	./.	0/0:11,0:12:14.40:0,14,103	0/1:10,0:9:9.94:10,0,50	1/1:8,5:14:9.03:132,9,0	1/1:22,0:22:5.01:20,5,0	1/1:7,1:7:4.83:49,5,0	0/0:4,0:5:11.39:0,11,104	0/0:7,0:8:8.86:0,9,78	1/1:3,0:5:2.62:26,3,0	1/1:2,0:5:6.01:58,6,0	0/0:7,0:7:9:0,9,83	0/0:9,0:10:11.60:0,12,91	0/0:4,0:6:5.64:0,6,27	0/0:14,0:14:2.79:0,3,14	0/0:7,0:7:9.02:0,9,96	1/1:8,0:7:8.96:73,9,0	1/1:3,0:6:8.04:58,8,0	1/1:10,0:10:2.66:19,3,0	1/1:3,1:6:2.55:25,3,0	0/1:6,4:12:38.95:158,0,39	1/1:5,0:7:2.36:43,2,0	1/1:5,1:6:6.01:70,6,0	0/0:13,0:14:5.06:0,5,21	1/1:11,0:14:14.99:128,15,0	0/0:3,0:6:11.53:0,12,72
chr10	48883805	.	C	CT	1124.10	PASS	AB=0.877;AC=27;AF=0.482;AN=56;BaseQRankSum=-3.252;DP=414;FS=1.518;HRun=15;HaplotypeScore=73.6914;InbreedingCoeff=0.1955;MQ=59.87;MQ0=26;MQRankSum=-0.196;QD=4.10;ReadPosRankSum=0.545;VQSLOD=1.1480;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:21,0:19:3.43:3,0,102	0/0:3,0:2:2.94:0,3,18	0/0:37,0:11:10.48:0,10,55	0/0:29,0:14:6.75:0,7,33	1/1:9,9:20:2.22:182,2,0	0/0:14,0:14:11.54:0,12,72	0/0:18,0:18:20.11:0,20,121	0/1:29,10:34:10.31:147,0,10	0/1:9,1:11:5.58:6,0,74	1/1:4,6:9:11.79:88,12,0	1/1:9,7:16:25.35:207,25,0	0/0:7,0:7:2.88:0,3,18	0/0:5,0:5:1.98:0,2,6	1/1:3,4:6:3:25,3,0	0/1:6,1:8:14.49:14,0,28	0/0:8,0:8:8.61:0,9,51	0/1:8,10:19:25.49:114,0,25	1/1:9,5:13:3.61:122,4,0	0/1:15,4:16:36.31:49,0,36	0/0:5,0:6:4.95:0,5,24	1/1:7,1:7:5.99:48,6,0	0/1:4,0:4:0:0,0,0	0/1:9,1:10:16.86:17,0,27	0/0:10,0:8:2.51:0,3,18	1/1:9,3:12:5.99:51,6,0	1/1:10,8:15:14.98:126,15,0	1/1:10,3:12:9.42:71,9,0	0/1:17,1:11:12.02:19,0,12
chr10	48884873	.	G	GTTTTTTTA	1390.52	PASS	AC=12;AF=0.240;AN=50;BaseQRankSum=-3.382;DP=304;FS=2.847;HRun=0;HaplotypeScore=77.1991;InbreedingCoeff=0.6491;MQ=70.82;MQ0=3;MQRankSum=-4.613;QD=27.81;ReadPosRankSum=-2.297;VQSLOD=2.6735;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:30.10:0,30,726	0/0:4,0:4:6.02:0,6,148	0/0:32,0:15:5.02:0,5,128	0/0:23,0:12:2.73:0,3,21	0/0:20,0:20:33.11:0,33,807	0/0:10,0:10:12.04:0,12,295	0/0:7,0:7:18.04:0,18,389	0/0:21,0:19:21.04:0,21,399	0/0:4,0:4:6.02:0,6,148	0/0:15,0:15:12.03:0,12,246	0/0:17,0:17:36.12:0,36,864	1/1:3,0:3:3.01:67,3,0	1/1:5,0:5:3.01:66,3,0	0/0:7,0:7:9.03:0,9,222	0/0:8,0:8:21.05:0,21,419	0/0:3,0:3:3.01:0,3,74	0/0:18,0:17:38.80:0,39,889	0/0:7,0:6:3.01:0,3,74	1/1:8,5:13:21.07:654,21,0	1/1:5,4:8:9:265,9,0	./.	./.	1/1:3,2:5:3.01:122,3,0	./.	0/0:14,0:14:36.12:0,36,881	0/0:12,0:12:18.06:0,18,443	1/1:8,3:12:9.03:366,9,0	0/0:2,0:2:6.02:0,6,141
chr10	48889134	.	T	TGG	68.31	PASS	AB=0.957;AC=6;AF=0.111;AN=54;BaseQRankSum=-1.647;DP=508;FS=4.521;HRun=0;HaplotypeScore=33.9989;InbreedingCoeff=-0.0090;MQ=23.87;MQ0=128;MQRankSum=1.052;QD=0.85;ReadPosRankSum=1.234;VQSLOD=0.9074;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:11:14.72:0,15,184	0/0:6,0:1:3.01:0,3,39	0/0:25,0:1:0:0,0,0	0/0:30,0:2:2.99:0,3,24	0/0:29,0:14:17.92:0,18,177	0/0:17,0:2:6.02:0,6,77	0/0:11,0:3:6.02:0,6,78	0/0:25,0:7:20.74:0,21,250	0/0:13,0:8:21.06:0,21,263	0/0:21,0:8:20.26:0,20,208	0/1:18,1:6:19.54:20,0,129	0/1:13,0:9:25.85:26,0,35	0/1:11,1:4:27.39:29,0,27	0/0:17,0:13:23.52:0,24,249	0/0:14,0:9:11.96:0,12,126	0/0:8,0:4:9.01:0,9,99	0/0:23,0:9:20.96:0,21,224	0/0:17,0:4:6.02:0,6,69	0/1:21,1:10:96.64:97,0,116	0/0:21,0:2:2.97:0,3,20	0/0:7,0:3:5.97:0,6,60	1/1:14,0:5:1.40:4,1,0	./.	0/0:27,0:13:2.01:0,2,35	0/0:10,0:4:3.01:0,3,35	0/0:29,0:10:30.08:0,30,383	0/0:16,0:6:3.01:0,3,38	0/0:18,0:7:6.02:0,6,88
chr10	48890775	.	A	AG	8371.89	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=14.619;DP=597;FS=9.123;HRun=0;HaplotypeScore=79.7230;InbreedingCoeff=0.9763;MQ=74.20;MQ0=0;MQRankSum=-0.243;QD=40.25;ReadPosRankSum=4.483;VQSLOD=5.0901;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:56:99:0,165,2227	0/0:4,0:4:12.01:0,12,147	0/0:26,0:26:56.15:0,56,743	0/0:23,0:24:49.31:0,49,606	0/0:16,0:16:45.10:0,45,589	0/0:15,0:15:45.14:0,45,611	0/0:25,0:25:75.23:0,75,1014	0/0:23,0:23:69.19:0,69,902	0/0:24,0:24:72.24:0,72,1005	0/0:22,0:22:63.20:0,63,862	0/0:14,0:14:39.05:0,39,500	1/1:0,16:16:42.14:627,42,0	1/1:0,18:18:51.17:755,51,0	0/0:20,0:20:60.16:0,60,801	0/0:25,0:25:75.22:0,75,1000	0/0:10,0:10:27.08:0,27,359	0/0:24,0:24:66.21:0,66,903	0/0:12,0:12:5.67:0,6,408	1/1:0,22:22:66.15:922,66,0	1/1:0,19:19:51.17:760,51,0	1/1:0,52:52:99:1974,132,0	1/1:0,12:12:36.12:534,36,0	1/1:0,6:6:18.06:267,18,0	1/1:0,23:23:66.22:988,66,0	0/0:17,0:17:45.11:0,45,592	0/0:21,0:21:63.20:0,63,850	1/1:1,39:40:99:1544,105,0	0/0:10,0:10:30.07:0,30,398
chr10	48891010	.	TCCC	T	1273.83	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=3.466;DP=337;FS=21.943;HRun=13;HaplotypeScore=57.9278;InbreedingCoeff=0.8318;MQ=68.94;MQ0=1;MQRankSum=-0.276;QD=17.94;ReadPosRankSum=7.507;VQSLOD=0.0343;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:22:24.59:0,25,299	0/0:9,0:10:18.02:0,18,256	0/0:17,0:14:27.28:0,27,340	0/0:16,0:14:22.33:0,22,285	0/0:12,0:15:21.50:0,22,275	0/0:10,0:10:18.48:0,18,231	0/0:15,0:17:32.59:0,33,476	0/0:14,0:14:9.03:0,9,129	0/0:9,0:9:18.04:0,18,249	0/0:6,0:6:9.03:0,9,167	0/0:6,0:6:3.01:0,3,54	0/0:8,0:8:18.06:0,18,292	0/0:4,0:5:6.02:0,6,112	0/0:4,0:10:6.02:0,6,88	0/0:8,0:10:21.04:0,21,278	0/0:8,0:9:21.04:0,21,289	0/0:13,0:13:30.09:0,30,515	0/0:10,0:10:19.31:0,19,319	1/1:10,8:17:27:328,27,0	1/1:1,9:10:27.08:328,27,0	1/1:8,16:25:11.82:409,12,0	0/0:8,0:8:15.05:0,15,250	0/0:10,0:10:18.03:0,18,279	0/0:7,0:7:17.93:0,18,252	0/0:7,0:9:15.01:0,15,188	0/0:18,0:18:21.06:0,21,323	1/1:4,14:18:29.97:365,30,0	0/0:5,0:5:12.04:0,12,180
chr10	48891396	.	G	GGCTCGCTC	1898.51	PASS	AB=0.780;AC=8;AF=0.143;AN=56;BaseQRankSum=1.903;DP=608;FS=24.480;HRun=0;HaplotypeScore=145.3585;InbreedingCoeff=0.7008;MQ=74.18;MQ0=21;MQRankSum=0.788;QD=15.56;ReadPosRankSum=-1.102;VQSLOD=1.3470;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:40:99:0,108,1712	0/0:12,0:12:30.09:0,30,472	0/0:47,0:19:41.44:0,41,574	0/0:70,0:33:58.72:0,59,1030	0/0:20,0:20:48.14:0,48,758	0/0:24,0:23:18.76:0,19,765	0/0:18,0:17:38.68:0,39,667	0/0:29,0:28:62.15:0,62,948	0/1:19,0:19:99:167,0,520	0/0:16,0:14:36.12:0,36,622	0/0:10,0:10:24.04:0,24,371	0/0:17,0:17:42.13:0,42,695	0/0:6,0:5:15.03:0,15,226	0/0:17,0:17:35.96:0,36,552	0/0:19,0:19:53.97:0,54,874	0/0:28,0:27:62.94:0,63,1006	0/0:21,0:21:45.15:0,45,801	0/0:13,0:13:30.10:0,30,485	1/1:20,0:20:37.16:542,37,0	1/1:12,0:12:24.01:270,24,0	1/1:38,0:37:56.64:838,57,0	0/0:10,0:10:21.06:0,21,314	0/0:10,0:10:24.08:0,24,394	0/0:19,0:18:30.10:0,30,511	0/0:11,0:11:30.10:0,30,513	0/0:22,0:22:57.15:0,57,1044	0/1:7,26:33:16.39:235,0,16	0/0:6,0:5:15.05:0,15,247
chr10	48891397	.	GCT	G	357.04	PASS	AB=0.901;AC=18;AF=0.474;AN=38;BaseQRankSum=-0.037;DP=614;FS=12.746;HRun=0;HaplotypeScore=85.4953;InbreedingCoeff=0.4238;MQ=73.01;MQ0=21;MQRankSum=1.346;QD=1.73;ReadPosRankSum=1.479;VQSLOD=0.5310;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:41,1:41:22.32:51,0,22	./.	./.	0/0:70,0:33:0:0,0,0	./.	0/0:23,0:22:17.85:0,18,214	0/0:18,0:17:3.01:0,3,36	0/0:27,0:26:0.89:0,1,2	0/0:21,0:21:24.75:0,25,186	1/1:15,0:15:1.98:12,2,0	1/1:11,0:11:5.98:53,6,0	1/1:16,0:16:2.22:7,2,0	0/0:7,0:6:0.89:0,1,2	1/1:17,1:18:5.91:54,6,0	1/1:18,0:20:8.69:60,9,0	1/1:23,5:27:6.01:64,6,0	1/1:14,1:22:17.52:128,18,0	1/1:11,2:13:3:32,3,0	./.	./.	0/0:37,0:36:32.45:0,32,351	./.	./.	0/1:15,4:18:25.95:26,0,37	./.	0/0:22,0:22:0.89:0,1,2	0/0:33,0:33:21.01:0,21,236	./.
chr10	48892613	.	GAACTCACTTC	G	5297.64	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=11.598;DP=503;FS=27.299;HRun=0;HaplotypeScore=149.0834;InbreedingCoeff=0.9962;MQ=89.09;MQ0=0;MQRankSum=-11.354;QD=63.83;ReadPosRankSum=2.003;VQSLOD=3.0851;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,114,5834	0/0:6,0:6:18.06:0,18,845	0/0:21,0:21:63.19:0,63,2556	0/0:22,0:22:63.69:0,64,3219	0/0:20,0:20:60.21:0,60,2908	0/0:13,0:13:30.10:0,30,1601	0/0:20,0:20:60.21:0,60,3144	0/0:16,0:16:42.14:0,42,2165	0/0:11,0:11:33.11:0,33,1615	0/0:24,0:24:66.23:0,66,3474	0/0:15,0:15:42.14:0,42,2140	1/1:1,18:19:48.16:1589,48,0	1/1:0,16:15:35.98:1198,36,0	0/0:17,0:17:48.16:0,48,2470	0/0:14,0:14:39.11:0,39,1942	0/0:10,0:10:30.10:0,30,1600	0/0:27,0:27:75.26:0,75,3853	0/0:19,0:19:57.15:0,57,2715	0/0:23,0:23:66.23:0,66,3112	0/0:15,0:15:42.14:0,42,2221	0/0:31,0:31:87.30:0,87,4396	1/1:1,9:10:21.07:698,21,0	1/1:5,10:15:27.09:898,27,0	1/1:1,22:23:29.77:914,30,0	0/0:14,0:14:39.13:0,39,1888	0/0:21,0:21:63.22:0,63,3216	0/0:13,0:13:36.12:0,36,1866	0/0:9,0:9:27.09:0,27,1440
chr10	48893057	.	ACACACACACACACACACAC	A	2329.11	PASS	AB=0.894;AC=13;AF=0.232;AN=56;BaseQRankSum=6.344;DP=472;FS=8.565;HRun=0;HaplotypeScore=217.9685;InbreedingCoeff=0.5039;MQ=47.61;MQ0=19;MQRankSum=-7.558;QD=17.92;ReadPosRankSum=-2.590;VQSLOD=1.0886;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:39:63.52:0,64,2349	0/0:5,0:5:11.45:0,11,399	0/0:11,0:6:14.63:0,15,158	0/0:15,0:13:36.58:0,37,470	0/0:10,0:10:17.63:0,18,431	0/0:24,0:24:51.45:0,51,3192	0/0:31,0:29:63.75:0,64,2952	0/0:15,0:11:33.11:0,33,1120	0/0:13,0:13:33.43:0,33,1711	0/0:21,0:20:58.99:0,59,2727	0/0:10,0:10:15.05:0,15,485	0/1:14,3:17:16.56:451,0,17	0/1:19,1:19:82.11:394,0,82	0/0:18,0:18:22.49:0,22,1097	0/0:22,0:21:43.73:0,44,1895	0/0:20,0:19:54.18:0,54,2837	0/0:22,0:20:42.14:0,42,1684	0/0:21,0:18:48.15:0,48,2019	1/1:7,0:6:17.95:261,18,0	1/1:5,0:4:9.34:57,9,0	1/1:17,0:15:17.12:101,17,0	0/1:11,1:12:3.26:3,0,72	0/1:14,2:16:21.71:417,0,22	0/1:22,3:25:10.95:544,0,11	0/0:13,0:12:21.05:0,21,817	0/0:22,0:22:60.56:0,61,3056	1/1:10,0:9:18.91:272,19,0	0/0:8,0:8:21.07:0,21,1238
chr10	48893079	.	A	AG	1640.70	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=6.998;DP=522;FS=13.314;HRun=0;HaplotypeScore=111.0135;InbreedingCoeff=0.9468;MQ=63.84;MQ0=5;MQRankSum=-3.879;QD=21.59;ReadPosRankSum=-2.366;VQSLOD=3.5679;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:47.31:0,47,930	0/0:4,0:4:9.50:0,10,127	0/0:20,0:16:41.47:0,41,519	0/0:26,0:23:63.15:0,63,796	0/0:12,0:12:36.12:0,36,485	0/0:20,0:20:36.22:0,36,580	0/0:23,0:23:66.13:0,66,866	0/0:14,0:13:39.07:0,39,495	0/0:18,0:18:51.56:0,52,655	0/0:19,0:19:57.02:0,57,768	0/0:7,0:7:18.04:0,18,220	0/0:21,0:21:46.24:0,46,478	0/0:20,0:20:40.43:0,40,461	0/0:17,0:17:45.52:0,46,571	0/0:27,0:26:61.76:0,62,772	0/0:18,0:18:54.15:0,54,703	0/0:16,0:16:45.11:0,45,579	0/0:18,0:16:45.11:0,45,580	1/1:1,17:19:57.14:748,57,0	1/1:1,9:9:17.87:177,18,0	1/1:5,22:23:36.56:428,37,0	0/0:19,0:19:45.30:0,45,506	0/0:20,0:20:36.94:0,37,400	0/0:28,0:28:48.27:0,48,459	0/0:15,0:14:27.74:0,28,480	0/0:22,0:22:34.46:0,34,626	1/1:1,18:20:38.82:447,39,0	0/0:8,0:8:4.96:0,5,225
chr10	48894286	.	T	TGAGA	820.90	PASS	AB=0.929;AC=9;AF=0.167;AN=54;BaseQRankSum=5.585;DP=673;FS=4.902;HRun=0;HaplotypeScore=156.6864;InbreedingCoeff=0.7328;MQ=46.06;MQ0=54;MQRankSum=-1.095;QD=8.13;ReadPosRankSum=0.091;VQSLOD=2.2362;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:38:81.44:0,81,1227	0/0:11,0:11:27.09:0,27,455	./.	0/0:26,0:1:3.01:0,3,39	0/0:25,0:25:60.19:0,60,984	0/0:27,0:27:69.19:0,69,1096	0/0:30,0:30:62.32:0,62,1066	0/0:29,0:22:56.70:0,57,676	0/0:28,0:27:67.11:0,67,1104	0/0:25,0:24:68.40:0,68,1104	0/0:11,0:10:30.08:0,30,509	1/1:12,1:13:6.36:146,6,0	1/1:15,0:15:23.97:251,24,0	0/0:15,0:15:32.91:0,33,578	0/0:27,0:25:53.01:0,53,808	0/0:26,0:25:61.09:0,61,1037	0/0:26,0:24:53.66:0,54,795	0/0:18,0:17:37.57:0,38,583	0/0:23,0:21:41.94:0,42,506	0/0:23,0:22:20.91:0,21,269	0/0:30,0:23:15.04:0,15,190	1/1:21,0:19:14.54:228,15,0	1/1:25,1:22:1.96:65,2,0	0/1:24,2:26:15.95:277,0,16	0/0:26,0:26:74.27:0,74,1183	0/0:39,0:38:98.88:0,99,1492	0/0:24,0:24:54.49:0,54,691	0/0:13,0:13:36.08:0,36,547
chr10	48894288	.	TGAGAGAGA	T	1348	PASS	AB=0.880;AC=6;AF=0.115;AN=52;BaseQRankSum=7.617;DP=679;FS=2.772;HRun=0;HaplotypeScore=199.8914;InbreedingCoeff=0.5263;MQ=45.84;MQ0=54;MQRankSum=-7.792;QD=15.49;ReadPosRankSum=1.959;VQSLOD=2.8465;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:35:66.70:0,67,2083	0/0:11,0:11:27.09:0,27,989	./.	./.	0/0:25,0:25:51.15:0,51,1622	0/0:25,0:25:63.22:0,63,1981	0/0:30,0:30:58.55:0,59,2143	0/0:28,0:21:39.13:0,39,1284	0/0:26,0:26:57.88:0,58,2012	0/0:27,0:27:66.70:0,67,2281	0/0:12,0:11:33.11:0,33,1231	0/0:17,0:17:18.53:0,19,496	0/0:16,0:16:21.07:0,21,549	0/0:16,0:16:33.11:0,33,1242	0/0:25,0:23:45.15:0,45,1545	0/0:25,0:24:60.21:0,60,2133	0/0:27,0:25:57.16:0,57,1840	0/1:16,0:16:48.15:48,0,831	1/1:20,4:22:18.06:453,18,0	1/1:19,5:23:5.84:125,6,0	0/0:31,2:26:6.02:0,6,151	0/0:22,0:20:15.97:0,16,458	0/0:28,0:24:10.47:0,10,286	0/0:28,0:28:29.73:0,30,910	0/0:26,0:26:69.23:0,69,2264	0/0:38,0:37:84.25:0,84,2666	0/1:17,4:22:35.61:848,0,36	0/0:13,0:13:33.11:0,33,1065
chr10	48894297	.	GAGAGAGAGAGGTGTGT	G	2363.95	PASS	AB=0.872;AC=7;AF=0.130;AN=54;BaseQRankSum=8.977;DP=652;FS=11.569;HRun=0;HaplotypeScore=253.5966;InbreedingCoeff=-0.1640;MQ=46.23;MQ0=53;MQRankSum=-9.268;QD=16.42;ReadPosRankSum=-2.316;VQSLOD=0.6907;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:33:75.62:0,76,3635	0/0:10,0:10:27.09:0,27,1658	0/0:28,0:1:3.01:0,3,130	./.	0/0:26,0:26:60.21:0,60,3138	0/0:27,0:27:78.25:0,78,4049	0/0:30,0:30:67.39:0,67,3393	0/0:24,0:18:51.17:0,51,2278	0/0:23,0:22:64.10:0,64,3473	0/0:29,0:29:78.74:0,79,4349	0/0:15,0:14:39.13:0,39,2293	0/1:18,0:17:20.38:20,0,452	0/0:15,0:15:4.58:0,5,480	0/0:13,0:13:33.11:0,33,1922	0/0:25,0:23:51.65:0,52,2648	0/0:25,0:24:63.20:0,63,3607	0/0:27,0:25:66.23:0,66,3683	0/1:19,0:18:45.54:46,0,1655	0/1:10,5:13:22.58:506,0,23	0/1:12,8:20:19.60:409,0,20	0/0:10,17:21:6.02:0,6,278	0/1:23,0:21:40.77:41,0,622	0/1:26,0:23:99:133,0,327	0/0:29,0:29:29.71:0,30,1118	0/0:26,0:26:72.25:0,72,3904	0/0:36,0:35:99:0,103,5559	0/1:11,8:21:99:1338,0,117	0/0:14,0:14:39.13:0,39,2408
chr10	48894310	.	GTGT	G	525.04	PASS	AB=0.988;AC=12;AF=0.214;AN=56;BaseQRankSum=10.432;DP=642;FS=35.237;HRun=0;HaplotypeScore=133.4790;InbreedingCoeff=0.5289;MQ=46.03;MQ0=57;MQRankSum=-8.709;QD=3.30;ReadPosRankSum=-2.202;VQSLOD=0.7886;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:33:74.91:0,75,1189	0/0:13,0:13:35.98:0,36,606	0/0:32,0:4:12.04:0,12,217	0/0:30,0:3:9.03:0,9,175	0/0:24,0:24:59.86:0,60,1081	0/0:26,0:26:74.90:0,75,1302	0/0:25,0:25:56.98:0,57,991	0/0:31,0:25:72.05:0,72,1222	0/0:23,0:22:54.52:0,55,1029	0/0:28,0:28:75.06:0,75,1357	0/0:16,0:15:42.06:0,42,812	1/1:15,1:15:17.66:115,18,0	1/1:15,1:15:14.88:136,15,0	0/0:15,0:15:38.96:0,39,635	0/0:18,0:16:38.96:0,39,720	0/0:23,0:22:63.21:0,63,1089	0/0:26,0:24:60.20:0,60,1284	0/0:16,0:15:33.36:0,33,522	0/1:17,0:13:10.10:10,0,204	0/1:21,0:20:1.81:99,0,2	0/0:33,0:28:9.03:0,9,122	1/1:20,1:19:6.28:32,6,0	1/1:20,3:20:1.86:127,2,0	0/1:24,0:24:36.02:36,0,48	0/0:22,0:22:63.04:0,63,1058	0/0:33,0:32:93.85:0,94,1663	0/1:19,0:20:99:130,0,99	0/0:14,0:13:35.95:0,36,721
chr10	48895263	.	TA	T	507.91	PASS	AB=0.968;AC=16;AF=0.286;AN=56;BaseQRankSum=7.650;DP=485;FS=12.714;HRun=10;HaplotypeScore=77.7826;InbreedingCoeff=0.6017;MQ=72.42;MQ0=5;MQRankSum=-1.338;QD=3.65;ReadPosRankSum=2.667;VQSLOD=-0.1322;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:81.93:0,82,817	0/0:13,0:13:38.67:0,39,389	0/0:38,0:21:11.17:0,11,183	0/1:25,1:17:34.39:34,0,126	0/0:22,1:23:31.09:0,31,563	0/0:12,0:12:30.08:0,30,331	0/0:8,0:8:24.02:0,24,252	0/0:22,0:22:48.99:0,49,516	0/0:15,0:15:36.03:0,36,354	0/0:29,0:29:72.16:0,72,762	0/0:5,0:5:15.04:0,15,165	0/1:9,0:9:2.86:3,0,6	0/1:8,0:7:4.52:5,0,10	0/0:19,0:19:42.06:0,42,425	0/0:13,1:14:7:0,7,283	0/0:16,0:20:44.93:0,45,463	0/0:21,2:23:1.83:0,2,410	0/0:19,0:19:48.11:0,48,516	1/1:8,4:12:14.19:119,14,0	1/1:9,9:18:1.08:157,1,0	1/1:4,5:9:11.98:104,12,0	1/1:14,0:17:3.58:18,4,0	0/1:12,0:12:0.04:0,0,14	1/1:7,0:9:9.56:27,10,0	0/0:21,0:21:57.14:0,57,613	0/0:23,0:23:45.11:0,45,491	1/1:7,8:15:23.90:207,24,0	0/0:12,0:12:27.06:0,27,290
chr10	48895271	.	A	AGC	32.22	PASS	AB=0.816;AC=3;AF=0.054;AN=56;BaseQRankSum=5.748;DP=511;FS=6.730;HRun=0;HaplotypeScore=90.3516;InbreedingCoeff=-0.0413;MQ=69.82;MQ0=6;MQRankSum=-1.801;QD=0.90;ReadPosRankSum=2.726;VQSLOD=1.0913;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:99:0,99,1547	0/0:13,0:13:39.12:0,39,613	0/0:43,0:21:42.34:0,42,552	0/0:28,0:17:40.28:0,40,390	0/0:27,0:27:75.24:0,75,1163	0/0:13,0:13:33.10:0,33,514	0/0:9,0:9:24.08:0,24,382	0/0:21,0:21:60.18:0,60,908	0/0:14,0:14:39.13:0,39,602	0/0:30,0:30:87.23:0,87,1387	0/0:6,0:6:18.06:0,18,289	0/0:9,1:9:13.25:0,13,90	0/1:8,1:8:38.79:39,0,52	0/0:19,0:19:51.17:0,51,803	0/0:16,0:16:48.10:0,48,709	0/0:18,0:18:45.15:0,45,706	0/0:21,0:21:58.05:0,58,896	0/0:20,0:20:57.18:0,57,893	0/0:13,0:13:32.15:0,32,223	0/0:18,0:18:35.66:0,36,261	0/0:10,0:11:19.60:0,20,128	0/1:9,5:14:42.60:43,0,91	0/0:10,0:10:22.58:0,23,126	0/1:10,3:10:15.79:51,0,16	0/0:20,0:20:60.20:0,60,966	0/0:25,0:25:72.23:0,72,1111	0/0:20,0:20:29.14:0,29,264	0/0:17,0:17:45.13:0,45,663
chr10	48895273	.	AGC	A	517.06	PASS	AB=0.919;AC=12;AF=0.214;AN=56;BaseQRankSum=9.172;DP=511;FS=10.742;HRun=0;HaplotypeScore=85.3979;InbreedingCoeff=0.1376;MQ=69.88;MQ0=6;MQRankSum=-4.590;QD=3.04;ReadPosRankSum=-0.945;VQSLOD=1.1579;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:92.65:0,93,1272	0/0:13,0:13:26.78:0,27,493	0/1:42,1:21:47.33:47,0,253	0/1:28,0:17:17.44:17,0,236	0/0:27,0:27:56.05:0,56,1042	0/0:13,0:13:33.10:0,33,482	0/0:9,0:9:27.02:0,27,352	0/0:20,0:20:34.95:0,35,776	0/0:14,0:14:38.28:0,38,469	0/0:30,0:30:87.74:0,88,1230	0/0:6,0:6:17.95:0,18,244	1/1:7,3:9:5.56:151,6,0	0/1:8,1:8:11.61:73,0,12	0/0:19,0:19:53.72:0,54,682	0/0:17,0:17:30.76:0,31,535	0/0:18,0:18:41.94:0,42,607	0/0:21,0:21:59.31:0,59,735	0/0:20,0:20:57.19:0,57,836	0/1:12,0:13:22.27:22,0,41	0/1:19,0:19:97.29:119,0,97	0/1:11,0:11:18.34:18,0,29	0/1:9,5:14:60.09:68,0,60	1/1:9,1:10:5.56:84,6,0	0/1:10,3:10:1.77:68,0,2	0/0:20,0:20:60.14:0,60,839	0/0:25,0:25:70.90:0,71,928	0/0:20,0:20:2.51:0,3,111	0/0:17,0:17:36.23:0,36,674
chr10	48895275	.	C	CAAA	2262.13	PASS	AB=1.000;AC=20;AF=0.357;AN=56;BaseQRankSum=8.155;DP=535;FS=6.704;HRun=13;HaplotypeScore=99.1690;InbreedingCoeff=0.8252;MQ=68.30;MQ0=6;MQRankSum=-5.933;QD=11.20;ReadPosRankSum=-4.475;VQSLOD=0.0894;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:34:56.68:0,57,727	0/0:12,0:12:26.91:0,27,276	0/1:42,0:20:31.83:32,0,118	0/0:26,0:16:5.27:0,5,85	0/0:28,0:28:59.84:0,60,627	0/0:12,0:13:28.34:0,28,300	0/0:12,0:12:11.55:0,12,127	0/1:22,0:22:7.03:7,0,308	0/0:13,0:13:23.89:0,24,238	0/0:29,0:30:44.02:0,44,613	0/0:7,0:7:14.91:0,15,148	1/1:9,0:10:21.93:177,22,0	1/1:10,0:11:26.90:229,27,0	0/0:18,0:19:38.73:0,39,381	0/0:16,0:18:23.50:0,23,255	0/0:19,0:19:23.61:0,24,258	0/0:20,0:21:46.01:0,46,495	0/0:20,0:20:44.96:0,45,482	1/1:7,4:19:41.78:536,42,0	1/1:9,11:22:47.56:526,48,0	1/1:8,3:12:16.54:208,17,0	1/1:15,0:16:25.15:201,25,0	1/1:6,0:11:21.05:161,21,0	1/1:12,0:10:14.80:102,15,0	0/0:18,0:19:44.89:0,45,458	0/0:22,0:24:28.84:0,29,319	1/1:7,14:22:26.94:295,27,0	0/0:17,0:17:45.02:0,45,475
chr10	48895305	.	TGAAA	T	2837.53	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=9.556;DP=509;FS=4.841;HRun=0;HaplotypeScore=101.1460;InbreedingCoeff=0.9857;MQ=84.72;MQ0=2;MQRankSum=-9.911;QD=38.35;ReadPosRankSum=-0.572;VQSLOD=3.5746;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:75.26:0,75,1990	0/0:12,0:12:36.12:0,36,915	0/0:24,0:23:50.48:0,50,1313	0/0:25,0:24:55.83:0,56,1331	0/0:29,0:29:87.30:0,87,2242	0/0:11,0:11:33.11:0,33,843	0/0:13,0:13:36.12:0,36,931	0/0:20,0:20:60.20:0,60,1519	0/0:10,0:10:30.10:0,30,800	0/0:25,0:24:72.25:0,72,1896	0/0:17,0:17:48.16:0,48,1238	1/1:1,15:17:42.14:778,42,0	1/1:1,11:11:27.09:499,27,0	0/0:13,0:13:36.12:0,36,953	0/0:18,0:18:54.19:0,54,1420	0/0:16,0:16:36.12:0,36,960	0/0:18,0:18:48.14:0,48,1213	0/0:22,0:22:63.22:0,63,1540	0/0:20,0:20:57.20:0,57,1393	0/0:22,0:22:57.20:0,57,1517	0/0:19,0:19:51.17:0,51,1277	1/1:1,15:16:42.10:741,42,0	1/1:0,18:18:48.13:825,48,0	1/1:2,9:9:9.02:168,9,0	0/0:14,0:14:42.13:0,42,1064	0/0:18,0:18:54.18:0,54,1335	0/0:17,0:17:33.11:0,33,872	0/0:23,0:23:69.24:0,69,1840
chr10	48895385	.	T	TCACA	2109.77	PASS	AB=0.889;AC=31;AF=0.620;AN=50;BaseQRankSum=-2.128;DP=549;FS=0.795;HRun=0;HaplotypeScore=110.4973;InbreedingCoeff=0.5880;MQ=61.20;MQ0=12;MQRankSum=-1.345;QD=6.08;ReadPosRankSum=-1.426;VQSLOD=2.2865;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:7.56:0,8,79	0/0:12,0:13:12.02:0,12,146	./.	./.	1/1:22,1:25:14.51:243,15,0	0/0:11,0:11:6.02:0,6,92	0/0:21,0:21:17.40:0,17,212	1/1:21,0:21:5.92:39,6,0	0/0:13,0:13:15.04:0,15,213	1/1:24,0:23:26.83:346,27,0	1/1:15,4:21:3.01:70,3,0	1/1:20,0:19:11.55:212,12,0	1/1:11,0:11:5.98:85,6,0	1/1:16,0:16:3.01:69,3,0	0/0:20,0:20:27.06:0,27,368	0/0:19,0:20:22.84:0,23,429	0/1:10,5:20:50.81:62,0,51	1/1:8,6:15:6.91:125,7,0	./.	0/1:10,0:22:21.86:26,0,22	0/1:34,0:40:0:0,0,0	1/1:27,0:26:10.69:214,11,0	1/1:8,0:8:3.01:70,3,0	1/1:24,0:23:15.02:195,15,0	1/1:11,6:18:5.48:80,5,0	1/1:9,6:16:20.92:304,21,0	0/0:13,0:14:9:0,9,80	1/1:13,1:14:11.86:146,12,0
chr10	48895821	.	A	AT	3985.11	PASS	AB=0.724;AC=17;AF=0.304;AN=56;BaseQRankSum=-6.944;DP=575;FS=4.465;HRun=10;HaplotypeScore=59.5607;InbreedingCoeff=0.7582;MQ=76.40;MQ0=0;MQRankSum=0.199;QD=21.66;ReadPosRankSum=-0.370;VQSLOD=4.4942;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:39:99:0,113,898	0/0:15,0:15:38.95:0,39,320	0/1:8,0:8:3.44:3,0,29	0/0:17,0:18:0.56:0,1,145	0/0:34,0:34:80.86:0,81,665	0/0:23,0:24:64.92:0,65,517	0/0:15,0:16:40.98:0,41,326	0/0:24,0:24:59.89:0,60,488	0/0:18,0:18:29.95:0,30,246	0/0:15,0:15:35.94:0,36,293	0/0:21,0:21:56.93:0,57,468	1/1:5,14:19:36.09:384,36,0	1/1:1,9:10:24.06:256,24,0	0/0:14,0:14:35.95:0,36,295	0/0:24,0:24:56.90:0,57,468	0/0:15,0:16:43.99:0,44,351	0/0:34,1:35:92.85:0,93,760	0/0:26,0:26:65.91:0,66,542	0/1:4,12:16:10.29:290,0,10	1/1:5,31:36:56.46:772,56,0	1/1:1,9:10:24.06:256,24,0	1/1:4,28:33:84.15:874,84,0	0/1:3,6:9:6.60:142,0,7	1/1:2,14:18:41.77:412,42,0	0/0:16,0:16:41.95:0,42,345	0/0:24,0:24:56.85:0,57,461	1/1:2,23:25:57.10:596,57,0	0/0:12,0:12:32.96:0,33,271
chr10	48898846	.	GT	G	851.66	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=12.171;DP=609;FS=1.085;HRun=1;HaplotypeScore=94.3141;InbreedingCoeff=0.9825;MQ=86.43;MQ0=0;MQRankSum=-10.624;QD=14.68;ReadPosRankSum=0.900;VQSLOD=3.2894;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,120,1914	0/0:11,0:11:33.10:0,33,505	0/0:22,0:23:9.26:0,9,855	0/0:19,0:19:57.19:0,57,900	0/0:28,0:28:84.25:0,84,1294	0/0:28,0:28:84.20:0,84,1288	0/0:20,0:20:60.20:0,60,957	0/0:30,0:30:90.30:0,90,1416	0/0:26,0:26:75.24:0,75,1174	0/0:37,0:37:99:0,111,1774	0/0:26,0:26:72.25:0,72,1150	1/1:1,8:9:26.17:173,26,0	1/1:0,17:18:53.39:360,53,0	0/0:24,0:24:72.25:0,72,1148	0/0:28,0:28:84.29:0,84,1343	0/0:27,0:27:81.24:0,81,1247	0/0:15,0:15:45.11:0,45,664	0/0:15,0:15:42.05:0,42,666	0/0:29,0:29:81.28:0,81,1295	0/0:20,0:20:60.18:0,60,913	0/0:25,0:25:75.24:0,75,1176	1/1:3,10:13:32.30:207,32,0	1/1:2,8:10:23.72:159,24,0	1/1:0,8:8:15.58:126,16,0	0/0:17,0:17:51.17:0,51,815	0/0:29,0:29:87.30:0,87,1391	0/0:26,0:25:78.27:0,78,1240	0/0:8,0:8:24.08:0,24,383
chr10	48898848	.	G	GAAA	1743.09	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=12.294;DP=616;FS=1.697;HRun=0;HaplotypeScore=118.0010;InbreedingCoeff=0.9981;MQ=86.20;MQ0=0;MQRankSum=-10.780;QD=28.58;ReadPosRankSum=0.810;VQSLOD=3.8229;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,120,2227	0/0:11,0:11:33.11:0,33,601	0/0:23,0:23:39.96:0,40,1033	0/0:19,0:19:57.16:0,57,1015	0/0:27,0:27:78.27:0,78,1450	0/0:28,0:28:81.28:0,81,1502	0/0:22,0:22:66.21:0,66,1172	0/0:30,0:30:90.30:0,90,1642	0/0:26,0:26:75.26:0,75,1391	0/0:39,0:39:99:0,117,2122	0/0:28,0:28:75.25:0,75,1368	1/1:2,8:10:29.44:320,29,0	1/1:0,17:18:54.16:640,54,0	0/0:26,0:26:72.25:0,72,1342	0/0:28,0:28:84.29:0,84,1566	0/0:25,0:25:75.26:0,75,1399	0/0:13,0:13:39.13:0,39,727	0/0:15,0:15:42.14:0,42,783	0/0:30,0:30:84.28:0,84,1530	0/0:19,0:19:54.19:0,54,1007	0/0:24,0:24:72.25:0,72,1342	1/1:0,10:13:36.08:402,36,0	1/1:0,8:12:27.07:311,27,0	1/1:0,8:8:21.06:245,21,0	0/0:17,0:17:51.17:0,51,951	0/0:29,0:29:87.30:0,87,1619	0/0:27,0:26:81.26:0,81,1478	0/0:8,0:8:24.08:0,24,447
chr10	48898849	.	G	GAT	2668.38	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=13.007;DP=634;FS=3.465;HRun=0;HaplotypeScore=110.8589;InbreedingCoeff=0.9989;MQ=84.05;MQ0=0;MQRankSum=-11.963;QD=34.65;ReadPosRankSum=-0.111;VQSLOD=5.8536;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,123,1953	0/0:11,0:11:33.11:0,33,538	0/0:22,0:22:60.05:0,60,906	0/0:18,0:18:54.18:0,54,874	0/0:26,0:26:78.27:0,78,1272	0/0:28,0:28:81.28:0,81,1321	0/0:22,0:22:66.23:0,66,1072	0/0:29,0:29:87.29:0,87,1398	0/0:26,0:26:75.26:0,75,1223	0/0:39,0:39:99:0,117,1904	0/0:29,0:29:78.25:0,78,1246	1/1:4,8:12:33.11:486,33,0	1/1:4,17:21:63.20:856,63,0	0/0:26,0:26:78.23:0,78,1221	0/0:28,0:28:84.29:0,84,1368	0/0:26,0:26:75.26:0,75,1224	0/0:14,0:14:39.13:0,39,636	0/0:15,0:15:42.13:0,42,682	0/0:32,0:32:90.26:0,90,1414	0/0:19,0:19:57.18:0,57,905	0/0:24,0:24:72.25:0,72,1174	1/1:7,10:17:51.07:623,51,0	1/1:9,8:17:42.13:542,42,0	1/1:2,8:10:23.91:337,24,0	0/0:17,0:17:51.17:0,51,832	0/0:30,0:30:87.30:0,87,1419	0/0:27,0:26:81.28:0,81,1317	0/0:8,0:8:24.08:0,24,391
chr10	48900789	.	G	GAAGGCATACGCTGGCTGCCTCTCT	10598.16	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=8.818;DP=593;FS=2.984;HRun=0;HaplotypeScore=360.8845;InbreedingCoeff=0.9458;MQ=84.48;MQ0=0;MQRankSum=-10.416;QD=49.99;ReadPosRankSum=-5.813;VQSLOD=1.9359;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:54.18:0,54,2757	0/0:8,0:8:21.06:0,21,826	0/0:18,0:18:21.05:0,21,450	0/0:23,0:23:30.08:0,30,709	0/0:14,0:14:18.06:0,18,1129	0/0:28,0:28:54.15:0,54,2655	0/0:13,0:13:27.09:0,27,1342	0/0:27,0:27:36.11:0,36,1197	0/0:22,0:22:33.10:0,33,1701	0/0:15,0:15:21.05:0,21,545	0/0:13,0:13:15.05:0,15,801	1/1:34,0:34:48.11:2579,48,0	1/1:24,0:24:42.14:3026,42,0	0/0:22,0:22:39.12:0,39,2097	0/0:34,0:34:60.19:0,60,2829	0/0:27,0:27:54.19:0,54,2900	0/0:18,0:18:36.12:0,36,1899	0/0:17,0:17:39.13:0,39,2123	1/1:31,0:31:39.07:869,39,0	1/1:16,0:16:7.11:349,7,0	1/1:20,0:20:13.26:439,13,0	1/1:11,0:11:7.99:204,8,0	1/1:14,0:14:5.82:84,6,0	1/1:26,0:26:18.06:1141,18,0	0/0:20,0:20:42.11:0,42,2063	0/0:24,0:24:36.06:0,36,1336	1/1:29,3:35:25.33:1906,25,0	0/0:7,0:7:21.07:0,21,1318
chr10	48901255	.	T	TTAA	1284.35	PASS	AB=0.923;AC=11;AF=0.220;AN=50;BaseQRankSum=-2.669;DP=234;FS=4.060;HRun=0;HaplotypeScore=33.6337;InbreedingCoeff=0.5939;MQ=68.63;MQ0=0;MQRankSum=-1.394;QD=17.36;ReadPosRankSum=-1.781;VQSLOD=2.2459;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:7:9.03:0,9,120	0/0:3,0:3:6.02:0,6,80	./.	0/0:7,0:7:2.54:0,3,19	0/0:10,0:10:18.06:0,18,241	0/0:14,0:14:24.02:0,24,286	0/0:5,0:5:3.01:0,3,40	1/1:24,0:24:29.99:356,30,0	./.	0/0:16,0:16:33.09:0,33,401	0/0:6,0:6:6.02:0,6,80	0/0:4,0:4:12.04:0,12,161	0/0:5,0:5:6.02:0,6,80	0/0:6,0:6:6.02:0,6,80	0/0:6,0:6:12.04:0,12,161	0/0:6,0:6:9.03:0,9,120	0/0:18,0:18:42.14:0,42,561	0/0:11,0:11:24.06:0,24,304	1/1:10,6:16:18.06:349,18,0	1/1:3,1:4:3.01:58,3,0	1/1:2,4:6:12.04:233,12,0	./.	0/0:3,0:3:3.01:0,3,39	0/0:6,0:6:9.03:0,9,120	0/0:10,0:10:18.06:0,18,241	0/0:8,0:8:6.02:0,6,80	1/1:5,7:12:21.07:407,21,0	0/1:11,1:12:37.15:37,0,175
chr10	48903274	.	A	AC	1613.91	PASS	AB=1.000;AC=51;AF=0.981;AN=52;DP=273;FS=0.000;HRun=1;HaplotypeScore=261.0401;InbreedingCoeff=0.1022;MQ=32.67;MQ0=2;QD=5.98;VQSLOD=0.2254;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:11:11.92:88,12,0	1/1:4,0:4:5.91:38,6,0	./.	./.	1/1:15,1:16:2.78:14,3,0	1/1:5,2:7:8.73:53,9,0	1/1:8,1:9:17.58:113,18,0	1/1:12,0:12:11.39:77,11,0	1/1:5,2:7:8.85:56,9,0	1/1:11,0:11:16.66:85,17,0	0/1:15,0:15:0:0,0,0	1/1:8,0:8:11.67:71,12,0	1/1:17,1:18:20.60:137,21,0	1/1:11,1:12:15.50:97,15,0	1/1:7,2:9:8.62:46,9,0	1/1:14,0:14:36.63:241,37,0	1/1:3,0:3:2.97:20,3,0	1/1:4,0:4:2.79:19,3,0	1/1:4,0:4:5.54:24,6,0	1/1:17,2:19:8.67:49,9,0	1/1:11,1:12:5.84:35,6,0	1/1:12,1:13:8.90:62,9,0	1/1:17,0:17:5.93:40,6,0	1/1:9,1:10:8.90:60,9,0	1/1:5,0:5:11.87:80,12,0	1/1:8,0:8:10.71:55,11,0	1/1:12,1:13:5.83:36,6,0	1/1:9,0:9:14.38:94,14,0
chr10	48905385	.	GC	G	3090.54	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=11.393;DP=607;FS=5.009;HRun=5;HaplotypeScore=57.9256;InbreedingCoeff=0.9993;MQ=89.82;MQ0=0;MQRankSum=-1.580;QD=29.72;ReadPosRankSum=3.145;VQSLOD=4.3444;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,105,1417	0/0:12,0:12:33.11:0,33,451	0/0:24,0:24:63.18:0,63,811	0/0:21,0:21:57.10:0,57,726	0/0:30,0:30:87.29:0,87,1188	0/0:20,0:20:60.20:0,60,821	0/0:16,0:16:45.15:0,45,616	0/0:36,0:36:93.30:0,93,1246	0/0:17,0:17:51.16:0,51,683	0/0:29,0:29:87.28:0,87,1174	0/0:23,0:23:69.23:0,69,943	1/1:1,19:20:57.16:646,57,0	1/1:0,21:21:63.18:714,63,0	0/0:17,0:17:48.14:0,48,639	0/0:27,0:27:72.24:0,72,985	0/0:19,0:19:51.17:0,51,698	0/0:26,0:26:69.22:0,69,928	0/0:16,0:16:48.13:0,48,636	0/0:16,0:15:39.13:0,39,531	0/0:22,0:22:57.19:0,57,779	0/0:27,0:27:81.23:0,81,1088	1/1:0,14:14:39.11:442,39,0	1/1:0,18:18:51.15:579,51,0	1/1:4,27:31:78.22:885,78,0	0/0:14,0:14:42.11:0,42,555	0/0:24,0:24:69.22:0,69,932	0/0:20,0:20:57.18:0,57,765	0/0:12,0:12:23.27:0,23,327
chr10	48905684	.	T	TA	3501.36	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-10.964;DP=362;FS=9.769;HRun=5;HaplotypeScore=30.0264;InbreedingCoeff=0.9655;MQ=74.31;MQ0=0;MQRankSum=-0.826;QD=32.72;ReadPosRankSum=2.820;VQSLOD=3.1579;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:42.09:0,42,443	0/0:9,0:9:27.03:0,27,271	0/0:6,0:6:18.03:0,18,185	0/0:6,0:6:12.03:0,12,128	0/0:18,0:18:48.12:0,48,516	0/0:10,0:10:27.07:0,27,290	0/0:3,0:3:9.02:0,9,97	0/0:23,0:23:60.15:0,60,645	0/0:9,0:9:18.04:0,18,193	0/0:17,0:17:45.11:0,45,484	0/0:19,0:19:51.13:0,51,548	1/1:0,9:9:24.08:316,24,0	1/1:3,5:8:15.05:197,15,0	0/0:7,0:7:18.03:0,18,185	0/0:7,0:7:21.04:0,21,218	0/0:10,0:10:24.05:0,24,250	0/0:27,0:27:75.17:0,75,796	0/0:21,0:21:60.12:0,60,633	1/1:4,22:26:63.16:795,63,0	1/1:1,15:16:39.13:513,39,0	1/1:1,8:9:24.08:316,24,0	1/1:0,6:6:15.05:197,15,0	1/1:0,8:8:24.08:316,24,0	1/1:0,4:4:9.03:118,9,0	0/0:10,0:10:27.07:0,27,290	0/0:30,0:30:81.15:0,81,857	1/1:2,19:20:57.16:732,57,0	0/0:8,0:8:24.06:0,24,258
chr10	48907998	.	CA	C	3206.66	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=15.373;DP=755;FS=2.946;HRun=1;HaplotypeScore=116.5192;InbreedingCoeff=0.9999;MQ=87.22;MQ0=2;MQRankSum=-8.475;QD=28.13;ReadPosRankSum=-1.927;VQSLOD=3.0404;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:66,0:66:99:0,196,3109	0/0:11,0:11:33.06:0,33,461	0/0:28,0:28:83.23:0,83,1201	0/0:29,0:29:81.05:0,81,1179	0/0:15,0:15:39.12:0,39,596	0/0:25,0:25:75.24:0,75,1176	0/0:35,0:35:99:0,102,1556	0/0:18,0:18:54.17:0,54,789	0/0:29,0:29:87.30:0,87,1380	0/0:24,0:24:69.23:0,69,1086	0/0:19,0:19:54.18:0,54,855	1/1:0,23:23:66.20:815,66,0	1/1:0,17:17:48.15:574,48,0	0/0:26,0:26:78.23:0,78,1177	0/0:37,0:37:99:0,111,1704	0/0:34,0:34:99:0,102,1608	0/0:39,0:39:99:0,117,1784	0/0:29,0:29:87.27:0,87,1344	0/0:23,0:23:69.23:0,69,1068	0/0:14,0:14:42.14:0,42,668	0/0:59,0:59:99:0,178,2796	1/1:0,26:25:60.17:724,60,0	1/1:0,23:23:66.06:764,66,0	1/1:0,24:24:40.58:505,41,0	0/0:17,0:17:51.11:0,51,762	0/0:28,0:28:84.28:0,84,1322	0/0:23,0:23:69.20:0,69,1054	0/0:13,0:13:36.12:0,36,575
chr10	48908210	.	A	AG	3452.72	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=16.479;DP=752;FS=9.211;HRun=2;HaplotypeScore=115.1829;InbreedingCoeff=0.9865;MQ=90.38;MQ0=0;MQRankSum=-5.331;QD=25.39;ReadPosRankSum=4.343;VQSLOD=2.5941;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:58:99:0,165,2015	0/0:14,0:14:42.13:0,42,519	0/0:28,0:28:78.24:0,78,957	0/0:33,0:33:86.74:0,87,1028	0/0:17,0:17:48.15:0,48,595	0/0:24,0:24:66.19:0,66,806	0/0:33,0:33:96.27:0,96,1164	0/0:23,0:23:63.20:0,63,781	0/0:24,0:24:66.19:0,66,806	0/0:24,0:24:69.22:0,69,856	0/0:22,0:22:63.18:0,63,769	1/1:4,29:33:90.10:974,90,0	1/1:4,25:29:77.87:752,78,0	0/0:26,0:26:75.22:0,75,917	0/0:36,0:36:99:0,105,1299	0/0:34,0:34:99:0,99,1202	0/0:39,0:39:99:0,117,1449	0/0:31,0:31:87.27:0,87,1079	0/0:28,0:28:78.25:0,78,967	0/0:15,0:15:36.10:0,36,435	0/0:33,0:33:93.29:0,93,1153	1/1:1,25:26:59.80:586,60,0	1/1:3,14:17:35.79:332,36,0	1/1:3,28:31:68.74:809,69,0	0/0:18,0:18:51.16:0,51,632	0/0:29,0:29:84.18:0,84,1031	0/0:24,0:24:69.22:0,69,855	0/0:3,0:3:9.03:0,9,112
chr10	48908215	.	ACG	A	4088.06	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=16.854;DP=744;FS=9.960;HRun=0;HaplotypeScore=125.3259;InbreedingCoeff=0.9928;MQ=89.63;MQ0=0;MQRankSum=-3.103;QD=31.94;ReadPosRankSum=3.931;VQSLOD=5.6437;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:59,0:59:99:0,162,3152	0/0:16,0:16:48.15:0,48,908	0/0:28,0:28:81.16:0,81,1461	0/0:30,0:31:56.27:0,56,1434	0/0:18,0:18:51.15:0,51,940	0/0:21,0:21:63.22:0,63,1259	0/0:34,0:34:99:0,102,2033	0/0:25,0:25:72.19:0,72,1351	0/0:22,0:22:66.20:0,66,1301	0/0:25,0:25:75.21:0,75,1416	0/0:21,0:21:60.19:0,60,1141	1/1:0,29:29:87.25:1117,87,0	1/1:1,25:26:72.62:838,73,0	0/0:26,0:26:78.25:0,78,1514	0/0:34,0:34:99:0,102,1840	0/0:33,0:33:96.32:0,96,1913	0/0:41,0:41:99:0,123,2446	0/0:29,0:29:81.08:0,81,1642	0/0:28,0:28:81.14:0,81,1362	0/0:13,0:13:39.13:0,39,772	0/0:33,0:33:99:0,99,1923	1/1:0,25:25:71.96:804,72,0	1/1:3,14:17:39.88:417,40,0	1/1:3,28:31:67.25:912,67,0	0/0:21,0:21:60.19:0,60,1151	0/0:31,0:31:90.30:0,90,1787	0/0:23,0:23:69.24:0,69,1379	0/0:4,0:4:12.04:0,12,241
chr10	48908719	.	CTTT	C	412.48	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=1.937;DP=578;FS=1.909;HRun=17;HaplotypeScore=90.5748;InbreedingCoeff=0.9008;MQ=64.00;MQ0=8;MQRankSum=1.279;QD=5.89;ReadPosRankSum=3.346;VQSLOD=-0.6093;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:56:99:0,143,1878	0/0:6,0:7:15:0,15,219	0/0:19,0:9:6.02:0,6,73	0/0:22,0:13:10.98:0,11,83	0/0:12,0:15:33.88:0,34,439	0/0:15,0:15:37.31:0,37,494	0/0:23,0:24:41.94:0,42,511	0/0:30,0:28:48.09:0,48,682	0/0:10,0:12:24.06:0,24,354	0/0:23,0:28:56.55:0,57,726	0/0:15,0:17:45.11:0,45,657	0/0:9,0:18:24.96:0,25,333	0/0:10,0:10:26.68:0,27,348	0/0:10,0:10:23.44:0,23,336	0/0:17,0:17:33.06:0,33,465	0/0:13,0:15:33.01:0,33,428	0/0:32,0:35:80.89:0,81,1124	0/0:29,0:28:44.98:0,45,663	1/1:8,5:15:7.06:74,7,0	1/1:8,8:17:11.85:124,12,0	1/1:7,8:15:11.18:122,11,0	0/0:15,0:23:42.08:0,42,571	0/0:6,0:14:17.78:0,18,237	0/0:4,0:16:12.93:0,13,172	0/0:17,0:19:41.77:0,42,437	0/0:17,0:19:45.11:0,45,646	1/1:11,11:22:23.18:240,23,0	0/0:25,0:28:60.02:0,60,774
chr10	48910841	.	TG	T	597.13	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=9.811;DP=633;FS=4.764;HRun=1;HaplotypeScore=85.6557;InbreedingCoeff=0.9086;MQ=59.13;MQ0=4;MQRankSum=-6.993;QD=9.05;ReadPosRankSum=-4.588;VQSLOD=-0.6225;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:71.70:0,72,973	0/0:7,0:7:21.03:0,21,277	0/0:30,1:16:38.14:0,38,461	0/0:21,0:9:1.61:0,2,189	0/0:25,0:25:74.42:0,74,994	0/0:28,0:28:84.24:0,84,1155	0/0:32,0:32:96.26:0,96,1292	0/0:22,0:22:52.21:0,52,854	0/0:28,0:28:81.20:0,81,1095	0/0:27,0:27:81.23:0,81,1091	0/0:21,0:21:60.18:0,60,825	1/1:15,2:17:35.76:292,36,0	1/1:12,2:13:28.69:216,29,0	0/0:26,0:26:75.23:0,75,1049	0/0:31,0:31:93.25:0,93,1286	0/0:25,0:25:75.24:0,75,1053	0/0:35,0:35:99:0,99,1371	0/0:32,0:32:93.17:0,93,1269	0/0:25,1:26:31.10:0,31,575	0/0:16,1:17:50.35:0,50,572	0/0:15,0:15:30.07:0,30,389	1/1:11,1:12:10.21:78,10,0	1/1:5,4:8:17.92:146,18,0	1/1:12,2:13:5.17:28,5,0	0/0:22,0:22:66.20:0,66,904	0/0:34,0:34:99:0,102,1373	0/0:23,0:23:41.92:0,42,483	0/0:14,0:14:42.09:0,42,539
chr10	48910848	.	TTGG	T	1005.58	PASS	AB=1.000;AC=12;AF=0.214;AN=56;BaseQRankSum=10.908;DP=623;FS=4.061;HRun=0;HaplotypeScore=107.2779;InbreedingCoeff=0.7659;MQ=59.62;MQ0=3;MQRankSum=-6.392;QD=9.76;ReadPosRankSum=-5.553;VQSLOD=1.5147;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:69.23:0,69,1396	0/0:9,0:9:24.07:0,24,455	0/0:30,0:17:37.36:0,37,649	0/0:19,0:7:15.05:0,15,249	0/0:28,0:28:84.29:0,84,1679	0/0:28,0:28:81.27:0,81,1623	0/0:29,0:29:87.29:0,87,1656	0/0:24,0:24:69.23:0,69,1265	0/0:28,0:28:81.26:0,81,1606	0/0:30,0:30:87.30:0,87,1674	0/0:22,0:22:63.22:0,63,1276	1/1:16,0:16:40.41:339,40,0	1/1:13,1:13:37.49:361,37,0	0/0:26,0:26:75.22:0,75,1371	0/0:33,0:33:90.37:0,90,1865	0/0:25,0:25:75.26:0,75,1531	0/0:35,0:35:99:0,102,2005	0/0:31,0:31:87.27:0,87,1680	0/1:19,0:19:67.13:67,0,95	0/1:19,0:19:24.66:25,0,172	0/0:12,0:12:20.68:0,21,156	1/1:13,1:14:14.46:120,14,0	1/1:6,3:8:19.22:186,19,0	1/1:12,0:11:9.33:86,9,0	0/0:25,0:25:67.69:0,68,1431	0/0:31,0:31:93.32:0,93,1820	0/0:20,0:20:27.93:0,28,183	0/0:11,0:11:33.11:0,33,658
chr10	48910849	.	TGG	T	1213.33	PASS	AB=0.934;AC=13;AF=0.232;AN=56;BaseQRankSum=10.871;DP=611;FS=4.269;HRun=2;HaplotypeScore=91.9667;InbreedingCoeff=0.6681;MQ=60.01;MQ0=3;MQRankSum=-7.399;QD=10.93;ReadPosRankSum=-3.840;VQSLOD=-0.6966;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:72.23:0,72,1215	0/0:8,0:8:24.06:0,24,385	0/0:31,0:18:43.03:0,43,603	0/0:19,0:7:15.05:0,15,222	0/0:28,0:28:84.29:0,84,1435	0/0:27,0:27:81.27:0,81,1371	0/0:29,0:29:87.29:0,87,1439	0/0:23,0:23:69.24:0,69,1158	0/0:28,0:28:81.26:0,81,1346	0/0:31,0:31:90.30:0,90,1473	0/0:22,0:22:63.22:0,63,1080	1/1:10,5:15:37.07:365,37,0	1/1:6,7:13:37.29:397,37,0	0/0:26,0:26:78.21:0,78,1214	0/0:32,0:32:96.14:0,96,1586	0/0:26,0:26:78.26:0,78,1325	0/0:34,0:34:99:0,102,1731	0/0:31,0:31:87.26:0,87,1437	0/1:16,1:18:51.86:85,0,52	0/1:18,1:19:17.35:114,0,17	0/0:12,0:12:11.85:0,12,63	1/1:1,6:7:12:138,12,0	1/1:3,4:7:18.05:219,18,0	1/1:0,11:10:6.46:61,6,0	0/0:25,0:25:75.12:0,75,1250	0/0:31,0:31:93.31:0,93,1554	0/1:19,1:20:12.23:12,0,24	0/0:12,0:12:36.12:0,36,604
chr10	48910850	.	G	GTTT	1929.34	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=11.079;DP=617;FS=14.869;HRun=3;HaplotypeScore=102.2376;InbreedingCoeff=0.8482;MQ=61.01;MQ0=3;MQRankSum=-5.624;QD=15.43;ReadPosRankSum=-0.274;VQSLOD=-0.5568;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:75.22:0,75,1267	0/0:8,0:8:21.05:0,21,360	0/0:32,0:19:26.96:0,27,519	0/0:19,0:7:15.01:0,15,172	0/0:29,0:29:84.25:0,84,1434	0/0:27,0:27:81.27:0,81,1411	0/0:29,0:29:87.24:0,87,1444	0/0:23,0:23:69.17:0,69,1045	0/0:29,0:29:78.26:0,78,1407	0/0:31,0:31:90.29:0,90,1487	0/0:23,0:23:63.19:0,63,1119	0/1:14,0:14:7.45:130,0,7	1/1:13,0:13:9.75:97,10,0	0/0:25,0:25:72.16:0,72,1165	0/0:32,0:32:93.30:0,93,1649	0/0:26,0:26:78.25:0,78,1383	0/0:34,0:34:99:0,102,1762	0/0:28,0:28:84.29:0,84,1463	1/1:13,3:16:23.68:285,24,0	1/1:3,13:21:54.43:827,54,0	1/1:1,9:14:16.91:248,17,0	1/1:7,0:7:2.71:14,3,0	1/1:8,0:7:13.75:96,14,0	1/1:11,0:10:2.42:16,2,0	0/0:26,0:26:75.24:0,75,1307	0/0:32,0:32:93.29:0,93,1591	1/1:2,16:21:23.88:409,24,0	0/0:14,0:14:36.11:0,36,622
chr10	48910851	.	G	GT	394.05	PASS	AB=1.000;AC=13;AF=0.241;AN=54;BaseQRankSum=8.428;DP=615;FS=9.304;HRun=10;HaplotypeScore=84.0449;InbreedingCoeff=0.7621;MQ=61.76;MQ0=3;MQRankSum=-4.402;QD=3.52;ReadPosRankSum=0.481;VQSLOD=-0.0310;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,1:25:30.90:0,31,458	0/0:8,0:8:20.96:0,21,172	0/0:31,0:20:27.45:0,27,201	0/0:19,0:6:6.46:0,6,49	0/0:29,0:29:74.88:0,75,615	0/0:26,1:27:42.91:0,43,559	0/0:27,1:29:23.90:0,24,392	0/0:23,0:23:41.92:0,42,345	0/0:26,2:28:39.91:0,40,528	0/0:31,0:31:74.85:0,75,609	0/0:23,0:23:56.90:0,57,465	0/1:14,0:14:1.74:2,0,25	0/1:13,0:13:19.29:19,0,19	0/0:23,1:24:24.90:0,25,407	0/0:31,0:31:49.19:0,49,609	0/0:25,1:26:39.91:0,40,533	0/0:35,0:35:86.86:0,87,714	0/0:29,1:30:39.87:0,40,534	1/1:15,0:15:16.80:80,17,0	1/1:21,0:21:34.95:208,35,0	1/1:13,0:13:17.17:91,17,0	0/1:8,0:8:0.15:2,0,0	1/1:9,0:8:9.04:33,9,0	./.	0/0:25,1:26:37.25:0,37,507	0/0:30,2:32:45.88:0,46,579	1/1:19,0:19:25.57:130,26,0	0/0:14,0:14:32.87:0,33,260
chr10	48911039	.	A	ATGTGT	4163.30	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=9.219;DP=539;FS=7.025;HRun=0;HaplotypeScore=142.3753;InbreedingCoeff=0.7775;MQ=62.92;MQ0=22;MQRankSum=-10.912;QD=21.35;ReadPosRankSum=-5.032;VQSLOD=1.8833;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:90.14:0,90,1780	0/0:11,0:11:27.08:0,27,517	0/0:30,0:22:50.39:0,50,1044	0/0:22,0:16:33.58:0,34,591	0/0:12,0:12:32.68:0,33,464	0/0:21,0:22:57.13:0,57,1027	0/0:31,0:31:87.09:0,87,1569	0/0:29,0:29:78.25:0,78,1470	0/0:19,0:19:45.05:0,45,890	0/0:21,0:21:43.52:0,44,819	0/1:12,0:12:0.54:1,0,275	1/1:17,4:17:29.21:794,29,0	1/1:11,5:16:30.49:732,30,0	0/0:16,0:16:40.48:0,40,722	0/0:22,0:22:57.18:0,57,1117	0/0:26,0:26:51.16:0,51,971	0/0:14,0:13:4.38:0,4,466	0/1:11,0:11:13.66:14,0,351	1/1:14,0:12:24.03:516,24,0	1/1:12,0:8:19.97:209,20,0	1/1:20,1:12:14.72:297,15,0	1/1:12,0:10:18.02:341,18,0	1/1:16,3:18:30.24:331,30,0	1/1:12,8:16:18.06:362,18,0	0/0:19,0:19:11.83:0,12,571	0/1:24,0:24:22.92:23,0,847	1/1:11,2:10:21.07:546,21,0	0/0:12,0:12:33.10:0,33,639
chr10	48911046	.	TTG	T	345.16	PASS	AB=0.980;AC=12;AF=0.231;AN=52;BaseQRankSum=-0.203;DP=585;FS=13.440;HRun=0;HaplotypeScore=115.5208;InbreedingCoeff=0.1524;MQ=56.16;MQ0=36;MQRankSum=1.634;QD=1.55;ReadPosRankSum=-0.087;VQSLOD=1.3003;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:40,2:40:63.60:64,0,179	0/1:12,0:12:27.92:99,0,28	./.	./.	0/0:17,0:15:5.99:0,6,50	0/1:21,0:21:11.96:12,0,118	0/1:33,1:34:21.43:21,0,206	0/0:35,0:34:20.72:0,21,152	0/1:19,1:20:28.76:29,0,75	0/0:18,0:24:23.70:0,24,186	0/0:15,0:15:14.56:0,15,106	0/1:24,0:19:44.16:44,0,53	0/0:16,0:16:20.75:0,21,127	0/0:19,0:19:5.95:0,6,61	0/0:22,0:21:7.76:0,8,231	1/1:13,14:27:15.04:162,15,0	0/0:20,0:19:8.97:0,9,72	0/0:10,0:10:8.92:0,9,80	0/0:15,0:12:12.04:0,12,152	0/0:9,0:7:2.92:0,3,17	0/0:27,0:16:0:0,0,0	0/0:11,0:9:3:0,3,25	1/1:19,0:18:5.86:39,6,0	1/1:23,0:19:3.18:21,3,0	0/0:20,0:21:20.98:0,21,181	0/0:24,0:25:11.58:0,12,82	0/0:12,0:10:21.01:0,21,117	0/0:13,0:12:2.97:0,3,20
chr10	48911049	.	TG	T	548.72	PASS	AB=0.810;AC=10;AF=0.179;AN=56;BaseQRankSum=8.415;DP=602;FS=6.724;HRun=1;HaplotypeScore=112.0727;InbreedingCoeff=0.0810;MQ=54.55;MQ0=38;MQRankSum=-5.402;QD=3.10;ReadPosRankSum=-1.611;VQSLOD=-0.7131;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:45:99:0,109,1341	0/0:12,0:12:33.45:0,33,339	0/0:26,0:18:51.16:0,51,647	0/0:17,0:11:33.10:0,33,402	0/0:15,0:13:20.92:0,21,265	0/0:21,0:21:59.05:0,59,773	0/0:34,0:34:83.92:0,84,1073	0/0:35,0:34:99:0,102,1291	0/0:24,0:23:55.37:0,55,687	0/0:24,0:23:63.18:0,63,840	0/0:15,0:15:29.98:0,30,332	0/1:21,5:26:99:119,0,104	0/1:13,2:16:99:136,0,108	0/0:18,0:18:36.10:0,36,458	0/0:23,0:22:60.17:0,60,808	0/0:26,0:26:40.65:0,41,414	0/0:20,0:19:33.09:0,33,397	0/0:10,0:10:24.06:0,24,309	0/1:12,5:14:79.17:79,0,210	0/1:5,5:6:26.53:27,0,36	0/1:22,7:17:23.48:95,0,23	0/1:11,3:13:72.02:72,0,113	0/1:10,4:16:0.23:48,0,0	1/1:19,5:20:5.92:88,6,0	0/0:21,0:21:45.31:0,45,592	0/0:25,0:24:57.13:0,57,707	0/1:13,3:11:30.41:30,0,156	0/0:12,0:11:30.10:0,30,391
chr10	48911053	.	T	TGTGTG	1214.50	PASS	AB=0.987;AC=15;AF=0.268;AN=56;BaseQRankSum=9.432;DP=596;FS=13.420;HRun=0;HaplotypeScore=151.1185;InbreedingCoeff=-0.0515;MQ=50.79;MQ0=40;MQRankSum=-6.159;QD=5.19;ReadPosRankSum=3.937;VQSLOD=1.9611;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:45:90.36:0,90,1347	0/0:12,0:12:33.11:0,33,477	0/0:23,0:15:39.12:0,39,486	0/0:16,0:10:18.05:0,18,219	0/1:15,0:13:13.25:13,0,136	0/0:23,0:23:69.18:0,69,972	0/0:35,0:35:87.66:0,88,1244	0/0:35,0:33:81.12:0,81,926	0/0:21,0:20:47.79:0,48,662	0/1:24,0:23:48.14:48,0,502	0/1:13,0:13:52.61:53,0,100	0/1:31,1:26:99:359,0,181	0/1:14,0:14:11.72:369,0,12	0/0:18,0:18:11.99:0,12,323	0/0:23,0:22:55.05:0,55,861	0/0:29,0:29:54.14:0,54,684	0/1:21,0:20:99:102,0,237	0/1:9,0:9:4.81:5,0,150	0/0:16,0:13:36.56:0,37,386	0/1:11,0:7:18.77:21,0,19	0/0:28,0:16:11.38:0,11,143	0/1:14,2:14:26.22:120,0,26	1/1:16,1:16:6.69:105,7,0	1/1:26,0:21:3.35:34,3,0	0/1:21,0:21:87.17:87,0,304	0/0:24,0:23:19.94:0,20,439	0/1:15,0:10:58.72:59,0,140	0/0:12,0:11:30.10:0,30,378
chr10	48911101	.	AG	A	1549.70	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=7.480;DP=485;FS=5.455;HRun=7;HaplotypeScore=90.3259;InbreedingCoeff=0.8722;MQ=63.90;MQ0=11;MQRankSum=-3.882;QD=14.90;ReadPosRankSum=0.022;VQSLOD=3.4961;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:32:84.25:0,84,1041	0/0:7,0:7:12.92:0,13,153	0/0:23,0:19:44.18:0,44,570	0/0:34,0:25:34.65:0,35,491	0/0:10,0:8:18.06:0,18,226	0/0:18,0:18:45.14:0,45,564	0/0:26,0:26:75.20:0,75,897	0/0:17,0:17:30.54:0,31,363	0/0:25,0:24:69.16:0,69,831	0/0:18,0:18:42.61:0,43,527	0/0:13,0:13:36.11:0,36,449	1/1:12,15:24:51.10:517,51,0	1/1:1,16:17:25.63:381,26,0	0/0:12,0:12:33.08:0,33,399	0/0:21,0:21:60.18:0,60,740	0/0:26,0:26:60.19:0,60,746	0/0:17,0:16:27.09:0,27,337	0/0:4,0:3:6.02:0,6,74	0/0:8,0:8:12.02:0,12,151	0/1:10,0:10:0.10:0,0,0	0/0:23,0:22:11.34:0,11,150	1/1:3,13:15:20.78:213,21,0	1/1:5,5:10:15.51:153,16,0	1/1:6,18:22:45.08:455,45,0	0/0:12,0:12:27.09:0,27,337	0/0:17,0:17:42.12:0,42,514	0/0:12,0:12:2.65:0,3,37	0/0:5,0:5:12.04:0,12,148
chr10	48911105	.	GGGGAT	G	1100.67	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=4.291;DP=496;FS=0.000;HRun=0;HaplotypeScore=119.9226;InbreedingCoeff=0.9002;MQ=65.37;MQ0=10;MQRankSum=-3.727;QD=20.77;ReadPosRankSum=1.574;VQSLOD=3.0134;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:33:81.28:0,81,2228	0/0:5,0:5:9.03:0,9,219	0/0:26,0:22:42.14:0,42,1006	0/0:36,0:27:51.54:0,52,1019	0/0:11,0:9:21.07:0,21,584	0/0:19,0:19:45.11:0,45,1182	0/0:27,0:27:66.23:0,66,1709	0/0:19,0:19:42.54:0,43,981	0/0:26,0:25:63.22:0,63,1710	0/0:17,0:17:39.13:0,39,1123	0/0:13,0:13:33.11:0,33,905	0/0:24,0:22:42.14:0,42,658	0/0:18,0:18:33.11:0,33,540	0/0:12,0:12:33.11:0,33,942	0/0:23,0:23:54.19:0,54,1495	0/0:27,0:27:63.18:0,63,1636	0/0:19,0:18:27.09:0,27,717	0/0:5,0:4:9.03:0,9,239	1/1:6,1:7:3.01:57,3,0	1/1:3,9:12:21.03:342,21,0	1/1:9,14:22:21.02:397,21,0	0/0:15,0:14:23.48:0,23,389	0/0:10,0:9:15.05:0,15,271	0/0:24,0:22:45.15:0,45,753	0/0:11,0:11:27.09:0,27,755	0/0:18,0:18:39.09:0,39,1048	1/1:2,9:11:24.07:454,24,0	0/0:4,0:4:12.04:0,12,344
chr10	48911726	.	A	AC	7954.25	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=8.121;DP=668;FS=3.639;HRun=0;HaplotypeScore=73.6549;InbreedingCoeff=0.9839;MQ=66.25;MQ0=0;MQRankSum=1.396;QD=37.00;ReadPosRankSum=3.076;VQSLOD=5.0069;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,105,1447	0/0:9,0:9:27.09:0,27,376	0/0:7,0:7:12.01:0,12,133	0/0:3,0:3:8.05:0,8,74	0/0:32,0:32:93.30:0,93,1281	0/0:26,0:26:72.22:0,72,972	0/0:11,0:11:33.08:0,33,400	0/0:43,0:43:99:0,123,1648	0/0:31,0:31:93.28:0,93,1236	0/0:34,0:34:99:0,102,1380	0/0:26,0:26:78.26:0,78,1084	1/1:0,19:20:54.15:769,54,0	1/1:2,26:28:69.23:1008,69,0	0/0:21,0:21:63.19:0,63,834	0/0:33,0:33:87.22:0,87,1118	0/0:26,0:26:78.25:0,78,1060	0/0:21,0:20:63.17:0,63,857	0/0:11,0:11:30.02:0,30,341	1/1:0,22:22:66.20:928,66,0	1/1:0,26:26:77.97:1035,78,0	1/1:1,19:20:51.13:717,51,0	1/1:0,24:24:59.95:797,60,0	1/1:1,21:22:52.79:827,53,0	1/1:0,22:22:54.18:789,54,0	0/0:26,0:26:76.46:0,76,989	0/0:23,0:23:69.22:0,69,931	1/1:0,30:31:75.25:1084,75,0	0/0:35,0:35:99:0,105,1432
chr10	48913092	.	ATGTGTGTGTGTG	A	495.90	PASS	AC=8;AF=0.154;AN=52;BaseQRankSum=2.329;DP=614;FS=0.000;HRun=0;HaplotypeScore=184.5935;InbreedingCoeff=0.6803;MQ=65.07;MQ0=20;MQRankSum=-2.979;QD=6.61;ReadPosRankSum=1.186;VQSLOD=2.6058;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:20:12.04:0,12,493	0/0:7,0:7:12.04:0,12,417	0/0:30,0:19:2.04:0,2,6	0/0:38,0:24:3.01:0,3,60	0/0:16,0:21:6.02:0,6,222	0/0:17,0:18:17.93:0,18,475	0/0:16,0:22:33.11:0,33,1000	0/0:35,0:35:24.55:0,25,1036	0/0:16,0:19:30.09:0,30,1127	0/0:21,0:21:30.10:0,30,1564	0/0:15,0:19:16.10:0,16,537	1/1:14,4:18:6.02:206,6,0	1/1:10,3:13:5.76:206,6,0	0/0:9,0:16:9.03:0,9,503	0/0:14,0:22:30.10:0,30,1036	0/0:18,0:25:15.05:0,15,588	0/0:35,0:35:69.71:0,70,3405	0/0:10,0:16:10.59:0,11,414	0/0:19,0:18:18.06:0,18,955	0/0:19,0:18:10.97:0,11,457	0/0:37,0:36:27.08:0,27,1208	./.	1/1:8,5:13:6.02:158,6,0	1/1:21,10:31:2.90:51,3,0	0/0:23,0:20:24.08:0,24,1223	0/0:20,0:18:25.64:0,26,1230	0/0:25,0:24:18.52:0,19,637	./.
chr10	48914476	.	C	CAGACACAG	115.82	PASS	AB=0.877;AC=3;AF=0.054;AN=56;BaseQRankSum=3.716;DP=512;FS=1.252;HRun=0;HaplotypeScore=155.4842;InbreedingCoeff=-0.0754;MQ=40.17;MQ0=44;MQRankSum=-3.172;QD=2.19;ReadPosRankSum=-2.049;VQSLOD=2.5908;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:21:32.68:0,33,495	0/0:7,0:7:17.71:0,18,359	0/0:6,0:3:8.89:0,9,71	0/0:11,0:2:6:0,6,64	0/0:16,0:15:14.81:0,15,278	0/0:25,0:20:26.80:0,27,590	0/0:17,0:15:10.80:0,11,294	0/0:23,0:21:48.30:0,48,611	0/0:17,0:13:25.82:0,26,694	0/0:20,0:16:42.13:0,42,771	0/0:13,0:12:25.48:0,25,478	0/0:21,0:20:6.13:0,6,69	0/0:15,0:14:14.14:0,14,122	0/0:14,0:14:17.55:0,18,361	0/0:17,0:15:26.63:0,27,611	0/0:21,0:20:48.09:0,48,831	0/0:23,0:18:36.08:0,36,698	0/0:21,0:16:40.03:0,40,735	0/1:15,0:13:80.13:108,0,80	0/1:21,0:20:5.01:5,0,37	0/0:24,0:19:2.89:0,3,16	0/0:15,0:14:14.88:0,15,127	0/0:24,0:23:5.70:0,6,41	0/0:23,0:18:5.94:0,6,41	0/0:17,0:15:17.67:0,18,350	0/0:31,0:28:81.25:0,81,1499	0/1:7,9:15:95.22:95,0,119	0/0:15,0:12:28.91:0,29,502
chr10	48914490	.	CAGAGAG	C	1992.74	PASS	AB=0.924;AC=24;AF=0.500;AN=48;BaseQRankSum=2.764;DP=487;FS=20.178;HRun=0;HaplotypeScore=135.7582;InbreedingCoeff=0.3462;MQ=40.49;MQ0=47;MQRankSum=3.063;QD=7.66;ReadPosRankSum=0.275;VQSLOD=1.4307;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:19:2.78:0,3,491	0/1:8,0:8:40.83:49,0,41	./.	./.	1/1:17,0:16:8.77:98,9,0	1/1:13,0:22:2.59:45,3,0	0/0:16,0:16:3.01:0,3,51	0/0:20,0:17:8.68:0,9,89	1/1:14,0:13:2.52:45,3,0	0/1:16,8:20:77.73:294,0,78	1/1:12,0:11:8.80:101,9,0	0/0:11,0:15:0.47:0,0,1	1/1:9,0:11:2.98:42,3,0	./.	0/0:17,0:15:5.59:0,6,50	0/0:16,0:15:17.16:0,17,401	0/0:25,0:20:24.08:0,24,552	0/1:23,0:18:34.19:174,0,34	1/1:16,0:14:14.37:136,14,0	1/1:20,0:20:11.46:157,11,0	0/0:25,0:20:2.92:0,3,17	./.	0/0:12,0:20:2.99:0,3,43	0/0:17,0:13:5.95:0,6,78	1/1:14,0:13:5.56:79,6,0	1/1:20,10:26:29.97:498,30,0	0/1:16,0:15:16.43:138,0,16	1/1:18,1:15:25.09:295,25,0
chr10	48915581	.	AT	A	1438.38	PASS	AB=0.836;AC=19;AF=0.339;AN=56;BaseQRankSum=-0.680;DP=461;FS=4.849;HRun=13;HaplotypeScore=69.7373;InbreedingCoeff=0.7526;MQ=74.36;MQ0=0;MQRankSum=-0.434;QD=9.53;ReadPosRankSum=0.456;VQSLOD=2.9993;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,2:31:28.72:0,29,580	0/0:5,0:5:12.02:0,12,117	0/1:16,1:12:28.58:29,0,60	0/1:13,1:13:8.31:8,0,39	0/0:14,0:14:23.13:0,23,287	0/0:18,1:19:29.15:0,29,433	0/0:16,0:20:44.33:0,44,355	0/0:21,0:22:47.82:0,48,429	0/0:9,0:9:15.02:0,15,146	0/0:24,0:24:54.23:0,54,473	0/0:10,0:12:13.15:0,13,180	1/1:4,6:12:21.86:143,22,0	1/1:5,14:19:6.55:207,7,0	0/0:9,0:8:17.89:0,18,155	0/0:27,0:27:72.10:0,72,695	0/0:26,1:27:50.20:0,50,645	0/0:20,0:19:50.99:0,51,466	0/0:25,0:26:35.67:0,36,380	1/1:4,14:20:19.57:281,20,0	0/1:5,7:12:5.52:114,0,6	1/1:2,7:10:19.92:137,20,0	1/1:0,6:6:11.42:87,11,0	1/1:2,13:15:32.81:241,33,0	1/1:2,12:14:32.81:241,33,0	0/0:9,0:11:23.85:0,24,208	0/0:19,0:19:47.99:0,48,449	1/1:2,10:12:20.88:153,21,0	0/0:15,0:15:23.98:0,24,213
chr10	48915862	.	CT	C	856.79	PASS	AB=0.933;AC=12;AF=0.214;AN=56;BaseQRankSum=-3.316;DP=489;FS=8.860;HRun=12;HaplotypeScore=81.2591;InbreedingCoeff=0.5062;MQ=69.68;MQ0=10;MQRankSum=1.462;QD=6.12;ReadPosRankSum=-2.222;VQSLOD=1.4193;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:42.08:0,42,426	0/0:8,0:7:21.03:0,21,207	0/1:23,0:11:11.46:11,0,62	0/0:25,0:9:8.78:0,9,51	0/0:27,0:27:50.31:0,50,239	0/0:13,1:15:18.42:0,18,341	0/1:16,3:19:15.62:16,0,397	0/0:26,0:26:50.86:0,51,236	0/0:14,0:14:24.03:0,24,237	0/0:21,0:20:28.41:0,28,147	0/0:20,0:20:30.06:0,30,148	0/0:17,0:17:27.58:0,28,149	0/0:3,0:12:8.65:0,9,48	0/0:4,0:4:5.49:0,5,25	0/0:10,1:12:3.65:0,4,199	0/1:11,2:13:19.46:19,0,171	0/0:33,0:33:49.39:0,49,220	0/0:18,0:18:40.09:0,40,179	1/1:5,13:19:10.42:251,10,0	1/1:7,11:19:4.44:207,4,0	1/1:2,8:10:20.91:163,21,0	0/0:2,0:5:12.77:0,13,71	0/1:2,0:13:0.74:1,0,53	0/0:8,0:17:28.81:0,29,163	0/0:15,0:15:27.38:0,27,121	0/0:21,0:21:43.96:0,44,198	1/1:4,19:23:44.79:348,45,0	0/0:17,0:17:30.19:0,30,135
chr10	48915864	.	T	TTC	7071.80	PASS	AB=1.000;AC=22;AF=0.393;AN=56;BaseQRankSum=-12.245;DP=491;FS=10.058;HRun=0;HaplotypeScore=70.1004;InbreedingCoeff=0.8484;MQ=69.82;MQ0=8;MQRankSum=3.316;QD=32.29;ReadPosRankSum=3.554;VQSLOD=6.8067;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:57.13:0,57,759	0/0:7,0:7:21.06:0,21,301	0/0:23,0:11:10.36:0,10,120	0/0:24,0:9:14.21:0,14,85	1/1:2,25:27:78.05:1166,78,0	0/0:15,0:15:39.11:0,39,539	0/0:20,0:20:57.15:0,57,775	1/1:4,23:27:66.07:999,66,0	0/0:14,0:14:36.08:0,36,454	1/1:2,18:19:53.96:786,54,0	1/1:0,17:18:47.82:662,48,0	0/0:19,0:19:17.16:0,17,195	0/1:12,0:12:1.68:2,0,64	1/1:0,3:3:6.02:100,6,0	0/0:12,0:12:21.82:0,22,391	0/0:15,0:15:41.58:0,42,462	1/1:5,29:34:50.78:816,51,0	1/1:2,16:18:15.11:618,15,0	0/0:20,0:20:57.01:0,57,526	0/0:19,0:19:56.94:0,57,515	0/0:10,0:10:27.03:0,27,247	0/1:5,0:5:18.70:28,0,19	0/0:13,0:13:13.79:0,14,74	0/0:19,0:18:26.52:0,27,161	1/1:1,14:16:29.93:463,30,0	1/1:0,21:22:65.81:884,66,0	0/0:23,0:23:56.94:0,57,524	1/1:0,17:17:33.11:548,33,0
chr10	48915865	.	T	TC	2443.52	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=4.831;DP=485;FS=8.341;HRun=0;HaplotypeScore=76.4124;InbreedingCoeff=0.9215;MQ=69.93;MQ0=8;MQRankSum=1.656;QD=11.11;ReadPosRankSum=4.082;VQSLOD=3.9050;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:57.13:0,57,707	0/0:7,0:7:21.06:0,21,278	0/1:23,0:11:0.79:1,0,141	0/0:22,0:9:10.13:0,10,86	1/1:26,0:26:75.23:417,75,0	0/0:14,0:14:39.09:0,39,494	0/0:20,0:20:57.11:0,57,703	1/1:26,1:27:40.78:399,41,0	0/0:14,0:14:36.08:0,36,426	1/1:18,1:18:42.37:292,42,0	1/1:17,0:17:39.11:238,39,0	0/0:18,0:18:47.05:0,47,339	0/0:12,0:12:14.85:0,15,109	1/1:3,0:3:5.85:33,6,0	0/0:12,0:12:36:0,36,395	0/0:15,0:15:42.01:0,42,437	1/1:31,2:33:49.98:337,50,0	1/1:17,0:17:11:184,11,0	0/0:20,0:20:59.83:0,60,487	0/0:19,0:19:56.82:0,57,465	0/0:10,0:10:26.92:0,27,211	0/0:5,0:5:12.56:0,13,71	0/0:13,0:13:20.61:0,21,133	0/0:20,0:19:38.39:0,38,263	1/1:15,1:16:29.33:190,29,0	1/1:22,0:22:54.77:383,55,0	0/0:25,0:25:56.82:0,57,445	1/1:17,0:17:32.17:183,32,0
chr10	48916519	.	TA	T	14213.29	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=8.414;DP=733;FS=28.370;HRun=2;HaplotypeScore=93.8783;InbreedingCoeff=0.9999;MQ=83.14;MQ0=0;MQRankSum=-4.313;QD=36.92;ReadPosRankSum=1.808;VQSLOD=2.7647;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,108,1615	0/0:15,0:15:45.15:0,45,675	0/0:21,0:21:63.20:0,63,886	0/0:20,0:20:60.17:0,60,834	1/1:0,31:31:87.28:1130,87,0	0/0:26,0:26:78.25:0,78,1147	0/0:17,0:17:51.17:0,51,764	1/1:0,31:31:90.25:1137,90,0	0/0:22,0:22:66.22:0,66,988	1/1:0,25:25:75.23:956,75,0	1/1:1,16:17:42.14:545,42,0	0/0:30,0:30:90.30:0,90,1346	0/0:23,0:23:66.21:0,66,969	1/1:1,23:24:66.21:857,66,0	0/0:32,0:32:96.33:0,96,1438	0/0:28,0:28:84.28:0,84,1258	1/1:0,29:29:84.27:1091,84,0	1/1:1,10:11:30.10:389,30,0	1/1:0,22:22:66.19:838,66,0	1/1:1,30:31:90.29:1169,90,0	1/1:0,41:41:99:1558,120,0	0/0:23,0:23:66.17:0,66,944	0/0:27,0:27:72.24:0,72,1079	0/0:28,0:28:81.27:0,81,1211	1/1:0,22:22:66.21:857,66,0	1/1:1,35:36:60.35:1266,60,0	1/1:0,31:31:87.28:1130,87,0	1/1:2,32:34:99:1291,102,0
chr10	48916618	.	T	TTG	16685.10	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-0.328;DP=669;FS=1.445;HRun=0;HaplotypeScore=96.2301;InbreedingCoeff=0.9998;MQ=62.12;MQ0=9;MQRankSum=1.111;QD=35.20;ReadPosRankSum=1.668;VQSLOD=6.6665;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:78.19:0,78,1067	0/0:9,0:9:27.06:0,27,372	0/0:26,0:15:35.64:0,36,412	0/0:18,0:16:34.70:0,35,403	1/1:12,22:33:96.19:1544,96,0	0/0:24,0:24:69.22:0,69,995	0/0:16,0:16:47.63:0,48,634	1/1:4,29:30:81.12:1192,81,0	0/0:20,0:20:60.19:0,60,840	1/1:6,14:20:57.11:884,57,0	1/1:9,12:21:60.17:965,60,0	1/1:0,0:21:54.16:239,54,0	1/1:0,0:25:56.45:249,56,0	1/1:4,15:20:60.16:970,60,0	0/0:31,0:31:93.28:0,93,1295	0/0:23,0:23:66.20:0,66,911	1/1:9,17:27:78.21:1235,78,0	1/1:4,12:16:48.12:766,48,0	1/1:2,16:19:53.85:724,54,0	1/1:1,32:32:84.12:1326,84,0	1/1:10,10:20:56.52:830,57,0	1/1:1,0:24:57.81:261,58,0	1/1:1,0:28:58.57:246,59,0	1/1:3,0:20:49.36:223,49,0	1/1:9,17:26:78.20:1196,78,0	1/1:5,17:22:63.20:1064,63,0	1/1:13,25:38:99:1679,110,0	1/1:7,17:24:66.21:1091,66,0
chr10	48916719	.	AC	A	3957.91	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=0.537;DP=569;FS=2.766;HRun=8;HaplotypeScore=85.4171;InbreedingCoeff=0.9560;MQ=57.86;MQ0=12;MQRankSum=2.987;QD=18.67;ReadPosRankSum=3.547;VQSLOD=3.7065;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:97.98:0,98,1104	0/0:7,0:6:14.70:0,15,107	0/0:15,0:5:11.85:0,12,106	0/0:12,0:5:9.02:0,9,98	0/0:4,0:13:22.34:0,22,107	0/0:27,0:27:75.16:0,75,848	0/0:17,0:16:29.97:0,30,316	0/0:12,0:16:20.41:0,20,122	0/0:24,0:22:66.18:0,66,776	0/0:15,0:14:20.56:0,21,135	0/0:5,0:6:3.35:0,3,16	1/1:0,21:21:48.08:463,48,0	1/1:3,16:18:39.06:376,39,0	0/0:1,1:15:31.84:0,32,180	0/0:18,0:16:45.11:0,45,518	0/0:22,0:21:63.15:0,63,719	0/0:9,0:21:50.12:0,50,275	0/0:14,2:23:51.69:0,52,286	1/1:7,7:12:27.22:269,27,0	1/1:2,29:30:77.85:699,78,0	1/1:5,16:21:29.08:266,29,0	1/1:4,27:29:62.84:572,63,0	1/1:2,15:17:33.04:312,33,0	1/1:4,18:22:41.96:392,42,0	0/0:6,0:13:34.95:0,35,207	0/0:3,0:20:43.26:0,43,228	1/1:4,32:36:63.09:608,63,0	0/0:1,0:24:54.67:0,55,285
chr10	48917532	.	C	CT	8757.59	PASS	AB=1.000;AC=39;AF=0.696;AN=56;BaseQRankSum=13.038;DP=676;FS=6.571;HRun=9;HaplotypeScore=95.5324;InbreedingCoeff=0.9238;MQ=78.28;MQ0=0;MQRankSum=-1.412;QD=18.51;ReadPosRankSum=0.081;VQSLOD=4.6357;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:68.88:0,69,585	0/0:19,0:19:44.97:0,45,391	0/0:21,0:22:22.99:0,23,237	0/1:18,0:15:2.32:2,0,124	1/1:2,22:24:57.15:628,57,0	0/0:26,1:29:33.87:0,34,500	0/0:22,0:23:59.01:0,59,498	1/1:11,17:28:5.51:493,6,0	0/0:21,0:21:59.99:0,60,521	1/1:5,27:32:58.47:842,58,0	1/1:6,16:22:23.05:444,23,0	1/1:8,1:17:17.21:105,17,0	1/1:7,1:28:20.68:149,21,0	1/1:0,19:19:45.11:489,45,0	0/0:33,1:34:50.75:0,51,662	0/0:22,1:24:28.84:0,29,468	1/1:3,18:21:16.06:404,16,0	1/1:2,13:15:30.08:331,30,0	1/1:3,17:20:50.49:529,50,0	1/1:3,29:32:64.07:885,64,0	1/1:4,20:24:25.09:503,25,0	1/1:5,1:26:57.31:325,57,0	1/1:7,1:35:64.83:342,65,0	1/1:4,3:22:40.17:240,40,0	1/1:2,11:14:26.71:325,27,0	1/1:7,17:24:26.29:485,26,0	1/1:1,21:23:50.97:544,51,0	1/1:3,25:28:63.17:694,63,0
chr10	48918417	.	C	CTT	5286.12	PASS	AB=0.594;AC=36;AF=0.643;AN=56;BaseQRankSum=3.614;DP=573;FS=6.725;HRun=11;HaplotypeScore=88.5168;InbreedingCoeff=0.8252;MQ=58.47;MQ0=5;MQRankSum=-2.258;QD=13.38;ReadPosRankSum=-3.528;VQSLOD=2.7393;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:80.04:0,80,744	0/0:13,0:13:33.05:0,33,319	0/0:17,0:10:13.50:0,13,101	0/0:10,0:7:11.50:0,11,94	1/1:8,13:21:28.48:306,28,0	0/0:19,0:19:44.97:0,45,431	0/0:20,0:20:51.01:0,51,494	1/1:13,16:29:46.36:544,46,0	0/0:18,0:18:38.69:0,39,359	1/1:5,14:21:42.07:519,42,0	1/1:6,6:13:17.93:164,18,0	0/1:6,0:17:26.25:100,0,26	1/1:6,0:19:27.95:113,28,0	1/1:4,15:20:29.42:365,29,0	0/0:22,0:26:27.32:0,27,394	0/0:23,0:24:50.98:0,51,544	1/1:7,17:29:41.17:487,41,0	1/1:6,11:19:23.05:274,23,0	1/1:16,1:17:13.47:171,13,0	1/1:10,0:31:48.57:454,49,0	1/1:9,1:10:15:151,15,0	1/1:3,0:18:32.44:112,32,0	1/1:6,1:21:32.95:147,33,0	0/1:8,0:29:11.92:123,0,12	1/1:1,12:13:24.04:318,24,0	1/1:7,13:24:56.39:655,56,0	1/1:8,0:21:11.79:102,12,0	1/1:5,11:17:14.54:182,15,0
chr10	48918506	.	AC	A	719.10	PASS	AB=0.861;AC=10;AF=0.185;AN=54;BaseQRankSum=5.837;DP=355;FS=0.000;HRun=10;HaplotypeScore=57.5738;InbreedingCoeff=0.3393;MQ=67.08;MQ0=2;MQRankSum=-4.015;QD=6.78;ReadPosRankSum=0.626;VQSLOD=1.1074;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:16,4:20:45.08:45,0,212	0/0:4,0:4:9:0,9,90	0/0:21,0:13:14.75:0,15,119	0/0:15,0:10:11.84:0,12,132	0/0:13,0:15:19.53:0,20,124	0/1:12,2:14:16.03:16,0,281	0/1:15,2:17:9.99:10,0,348	0/0:12,0:12:3:0,3,26	0/0:10,0:10:18.04:0,18,191	0/0:6,0:6:5.96:0,6,45	0/0:12,0:11:4.24:0,4,29	0/0:15,0:18:23.64:0,24,197	0/0:6,0:6:12.02:0,12,124	0/0:12,0:12:6.08:0,6,26	0/0:16,0:16:39.07:0,39,407	0/0:21,0:22:44.20:0,44,525	0/0:16,0:16:7.68:0,8,47	0/0:7,0:7:1.82:0,2,22	1/1:5,9:14:23.98:208,24,0	1/1:4,8:12:26.98:234,27,0	./.	0/0:14,0:14:27.53:0,28,291	0/0:18,1:19:4:0,4,256	0/1:13,3:16:42.06:42,0,255	0/0:6,0:6:1.82:0,2,5	0/0:13,0:13:10.93:0,11,64	1/1:2,10:13:38.02:315,38,0	0/0:2,0:2:0:0,0,0
chr10	48918523	.	C	CT	2817.49	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=7.197;DP=363;FS=0.000;HRun=6;HaplotypeScore=49.1276;InbreedingCoeff=0.9611;MQ=62.52;MQ0=3;MQRankSum=-1.698;QD=19.17;ReadPosRankSum=-4.056;VQSLOD=2.1787;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:69.16:0,69,704	0/0:6,0:6:18.04:0,18,183	0/0:21,0:13:35.07:0,35,318	0/0:17,0:13:31.34:0,31,288	1/1:8,0:8:8.95:67,9,0	0/0:12,0:12:33.08:0,33,337	0/0:19,0:19:48.11:0,48,490	1/1:14,0:14:38.62:274,39,0	0/0:9,0:9:18.03:0,18,183	1/1:5,0:5:14.83:111,15,0	1/1:11,0:11:17.86:126,18,0	0/0:14,0:14:42.10:0,42,428	0/0:11,0:11:30.07:0,30,306	1/1:4,0:4:8.96:70,9,0	0/0:16,0:16:42.09:0,42,428	0/0:22,0:22:50.24:0,50,518	1/1:14,0:14:17.51:141,18,0	1/1:12,0:12:26.83:200,27,0	1/1:5,10:13:27.07:326,27,0	1/1:1,13:14:36.12:453,36,0	1/1:1,7:8:21.07:264,21,0	0/0:13,0:13:36.08:0,36,367	0/0:13,0:13:27.05:0,27,275	0/0:17,0:17:48.11:0,48,489	1/1:12,0:12:26.83:198,27,0	1/1:10,0:10:29.72:220,30,0	1/1:2,15:17:45.13:554,45,0	1/1:2,0:2:5.97:44,6,0
chr10	48918524	.	T	TA	3527.23	PASS	AB=1.000;AC=25;AF=0.446;AN=56;BaseQRankSum=-1.028;DP=367;FS=1.969;HRun=0;HaplotypeScore=47.3097;InbreedingCoeff=0.7686;MQ=62.42;MQ0=3;MQRankSum=-3.837;QD=23.51;ReadPosRankSum=-1.571;VQSLOD=4.2723;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:72.23:0,72,988	0/0:6,0:6:18.06:0,18,251	0/0:21,0:13:35.94:0,36,418	0/0:17,0:13:35.51:0,36,435	1/1:0,8:8:11.95:155,12,0	0/0:11,0:11:33.11:0,33,461	0/0:19,0:19:57.15:0,57,747	1/1:0,15:15:42.13:621,42,0	0/0:9,0:9:27.06:0,27,331	1/1:0,5:5:15.05:228,15,0	1/1:2,9:11:18.06:275,18,0	0/0:14,0:14:42.14:0,42,587	0/0:12,0:12:33.04:0,33,436	1/1:0,4:4:9.03:137,9,0	0/0:17,0:17:45.14:0,45,614	0/0:22,0:22:64.39:0,64,815	1/1:1,14:14:7.92:262,8,0	1/1:1,12:13:27.07:413,27,0	0/1:14,0:12:25.92:93,0,26	0/1:14,0:14:0.91:137,0,1	0/1:8,0:8:1.37:72,0,1	0/0:13,0:13:39.12:0,39,527	0/0:13,0:13:39.06:0,39,473	0/0:17,0:17:51.15:0,51,694	1/1:1,12:13:27.09:413,27,0	1/1:1,10:11:30.10:457,30,0	1/1:17,0:17:0.16:171,0,0	1/1:0,2:2:6.02:92,6,0
chr10	48919162	.	CT	C	1770.72	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=6.298;DP=577;FS=2.287;HRun=6;HaplotypeScore=80.0389;InbreedingCoeff=0.9901;MQ=69.82;MQ0=0;MQRankSum=-2.345;QD=24.26;ReadPosRankSum=-1.584;VQSLOD=2.8533;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,105,1321	0/0:10,0:10:30.10:0,30,394	0/0:14,0:12:26.85:0,27,275	0/0:8,0:8:11.87:0,12,133	0/0:27,0:26:75.23:0,75,970	0/0:22,0:22:63.20:0,63,816	0/0:17,0:17:48.16:0,48,631	0/0:34,0:34:78.23:0,78,986	0/0:20,0:20:50.07:0,50,639	0/0:22,0:22:60.15:0,60,769	0/0:22,0:22:63.18:0,63,795	0/0:15,0:15:42.09:0,42,497	0/0:19,0:19:48.13:0,48,603	0/0:21,0:21:60.14:0,60,729	0/0:20,0:20:60.16:0,60,747	0/0:30,0:30:78.21:0,78,968	0/0:32,0:32:87.20:0,87,1068	0/0:16,0:16:36.12:0,36,469	1/1:8,9:17:41.94:409,42,0	1/1:5,22:27:72.17:767,72,0	1/1:4,6:10:24.01:233,24,0	0/0:18,0:18:51.13:0,51,637	0/0:24,0:24:54.62:0,55,682	0/0:17,0:17:48.15:0,48,617	0/0:19,0:19:54.17:0,54,696	0/0:23,0:23:66.20:0,66,849	1/1:6,13:19:51.08:522,51,0	0/0:19,0:19:57.19:0,57,749
chr10	48919195	.	TTTTG	T	8404.54	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=5.758;DP=631;FS=6.861;HRun=0;HaplotypeScore=120.8988;InbreedingCoeff=0.9891;MQ=65.68;MQ0=4;MQRankSum=-1.259;QD=25.86;ReadPosRankSum=0.295;VQSLOD=4.1665;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:72.25:0,72,1718	0/0:14,0:14:27.09:0,27,651	0/0:27,0:20:24.08:0,24,574	0/0:26,0:19:30.09:0,30,607	1/1:13,11:23:27.05:408,27,0	0/0:25,0:25:54.17:0,54,1222	0/0:18,0:18:30.10:0,30,713	1/1:20,9:28:24.07:355,24,0	0/0:19,0:19:51.16:0,51,1159	1/1:6,16:22:45.15:724,45,0	1/1:4,16:20:39.09:601,39,0	0/0:3,0:12:27.09:0,27,473	0/0:9,0:21:42.13:0,42,709	1/1:6,13:19:33.11:524,33,0	0/0:22,0:22:51.16:0,51,1159	0/0:26,0:26:69.22:0,69,1558	1/1:4,27:31:66.14:1035,66,0	1/1:11,12:23:27.79:561,28,0	1/1:9,13:22:18.09:580,18,0	1/1:8,21:29:69.18:1062,69,0	1/1:6,9:15:21.07:339,21,0	0/0:10,0:20:36.11:0,36,600	0/0:13,0:27:50.15:0,50,753	0/0:5,0:19:36.02:0,36,594	1/1:8,18:26:42.61:679,43,0	1/1:9,15:24:48.16:761,48,0	1/1:7,17:24:39.13:630,39,0	1/1:13,4:17:9.03:145,9,0
chr10	48919926	.	TCACACACACACACACACACA	T	690.09	PASS	AB=1.000;AC=13;AF=0.260;AN=50;BaseQRankSum=0.916;DP=489;FS=0.000;HRun=0;HaplotypeScore=210.3813;InbreedingCoeff=0.5954;MQ=67.61;MQ0=16;MQRankSum=0.586;QD=7.19;ReadPosRankSum=-0.199;VQSLOD=2.5128;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:15.05:0,15,965	./.	./.	0/0:45,0:26:3.01:0,3,45	1/1:7,3:10:5.98:60,6,0	0/0:15,0:15:21.07:0,21,1497	0/0:25,0:24:12.04:0,12,530	0/0:19,0:18:2.92:0,3,8	0/0:14,0:14:12.04:0,12,429	0/1:17,0:17:2.38:44,0,2	./.	0/0:18,0:18:29.18:0,29,1614	0/0:11,0:11:12.04:0,12,730	1/1:13,0:13:6.02:144,6,0	0/0:11,0:12:21.06:0,21,1176	0/0:21,0:20:16.30:0,16,1078	1/1:22,1:23:2.58:158,3,0	0/0:15,0:15:3.01:0,3,133	0/0:17,0:17:5.38:0,5,166	0/0:9,0:6:9.03:0,9,724	0/0:34,0:33:39.13:0,39,2430	0/0:16,0:16:6.02:0,6,514	0/0:9,0:8:12.04:0,12,1022	0/0:20,0:22:12.04:0,12,896	1/1:8,1:9:3.01:111,3,0	1/1:19,0:19:9.02:160,9,0	0/0:10,0:9:18.06:0,18,1013	1/1:4,1:5:3.01:159,3,0
chr10	48920788	.	CTT	C	5558.13	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=0.408;DP=481;FS=1.835;HRun=11;HaplotypeScore=70.9744;InbreedingCoeff=0.9312;MQ=61.34;MQ0=9;MQRankSum=-0.627;QD=25.73;ReadPosRankSum=1.484;VQSLOD=5.0118;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:45.12:0,45,647	0/0:13,0:14:33.10:0,33,471	0/0:35,0:11:13.46:0,13,191	0/0:9,0:2:2.96:0,3,46	1/1:3,22:26:65.89:682,66,0	0/0:17,0:18:41.63:0,42,600	0/0:7,0:8:20.56:0,21,286	1/1:4,13:16:36.06:373,36,0	0/0:12,0:12:33.11:0,33,507	1/1:2,21:23:63.15:669,63,0	1/1:2,23:25:60.13:637,60,0	0/0:2,0:12:21.03:0,21,200	0/0:2,0:13:18.03:0,18,190	1/1:1,12:13:39.09:410,39,0	0/0:15,0:15:33.10:0,33,486	0/0:15,0:15:39.12:0,39,579	1/1:6,26:31:63.15:671,63,0	1/1:5,16:21:48.03:497,48,0	0/0:2,0:11:20.34:0,20,82	0/0:3,0:24:48.41:0,48,208	0/0:2,0:13:30.44:0,30,118	0/0:6,0:9:16.70:0,17,135	0/0:1,0:4:9.01:0,9,86	0/0:0,0:5:2.79:0,3,103	1/1:4,25:29:69.15:734,69,0	1/1:1,15:17:48.10:502,48,0	0/0:3,0:20:32.38:0,32,112	1/1:1,12:13:36.09:383,36,0
chr10	48922319	.	A	ATT	6692.43	PASS	AB=0.559;AC=27;AF=0.482;AN=56;BaseQRankSum=-2.605;DP=638;FS=0.321;HRun=9;HaplotypeScore=75.9666;InbreedingCoeff=0.9181;MQ=78.26;MQ0=2;MQRankSum=-0.618;QD=21.66;ReadPosRankSum=-2.862;VQSLOD=3.4579;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,117,1219	0/0:7,0:7:18.04:0,18,191	0/0:13,0:13:27.04:0,27,287	0/0:15,0:15:32.97:0,33,333	1/1:5,11:18:35.46:414,35,0	0/0:18,0:18:45.09:0,45,479	0/0:19,0:19:39.06:0,39,415	1/1:4,23:27:66.06:854,66,0	0/0:22,0:22:48.10:0,48,511	1/1:4,18:22:54.09:683,54,0	1/1:5,24:31:70.48:856,70,0	0/0:19,0:19:48.09:0,48,502	0/0:33,0:33:90.19:0,90,950	1/1:3,17:22:38.62:563,39,0	0/0:25,0:25:69.14:0,69,719	0/0:30,0:30:78.07:0,78,802	1/1:1,25:25:48.16:739,48,0	1/1:2,11:13:27.09:416,27,0	1/1:6,0:19:33.19:130,33,0	1/1:3,0:24:49.33:211,49,0	1/1:3,0:28:54.90:188,55,0	0/0:24,0:24:63.10:0,63,654	0/0:24,0:25:54.06:0,54,622	0/0:30,0:30:81.18:0,81,862	1/1:2,10:13:32.60:470,33,0	1/1:2,23:25:69.13:949,69,0	0/1:7,0:33:34.37:118,0,34	1/1:1,4:7:8.52:101,9,0
chr10	48926496	.	CAG	C	2834.82	PASS	AB=0.880;AC=27;AF=0.482;AN=56;BaseQRankSum=9.750;DP=395;FS=8.631;HRun=0;HaplotypeScore=66.1033;InbreedingCoeff=0.4833;MQ=79.24;MQ0=16;MQRankSum=-0.010;QD=10.74;ReadPosRankSum=1.748;VQSLOD=2.5018;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:13,2:15:41.76:42,0,308	0/0:2,0:2:6.02:0,6,80	0/0:36,0:14:6.24:0,6,27	0/1:66,2:28:2.98:3,0,141	1/1:9,0:9:12.04:144,12,0	0/1:13,3:16:32.83:33,0,468	0/0:9,0:9:21.07:0,21,326	1/1:16,0:16:14.03:198,14,0	0/0:6,0:6:9.03:0,9,144	1/1:11,0:11:30.09:359,30,0	1/1:8,0:8:15.05:180,15,0	0/0:8,0:8:21.07:0,21,330	0/1:9,2:11:5.97:6,0,347	1/1:9,0:9:21.06:249,21,0	0/1:8,1:9:11.90:12,0,298	0/0:12,0:12:27.09:0,27,426	1/1:21,0:21:16.55:507,17,0	1/1:12,0:12:27.08:320,27,0	0/1:7,2:9:48.95:49,0,218	0/1:16,2:18:35.84:36,0,444	0/0:15,0:15:30.08:0,30,433	0/0:5,0:4:9.03:0,9,144	0/0:12,0:12:27.09:0,27,418	0/0:11,0:11:27.05:0,27,381	1/1:12,0:12:30.05:341,30,0	1/1:10,0:10:30.08:345,30,0	0/0:14,0:15:21.98:0,22,514	1/1:10,0:9:18.06:215,18,0
chr10	48926503	.	AG	A	1423.04	PASS	AB=0.670;AC=17;AF=0.304;AN=56;BaseQRankSum=10.228;DP=409;FS=5.817;HRun=1;HaplotypeScore=68.4916;InbreedingCoeff=0.7183;MQ=77.88;MQ0=18;MQRankSum=-0.069;QD=12.59;ReadPosRankSum=4.026;VQSLOD=2.4918;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:32.59:0,33,461	0/0:2,0:2:6.02:0,6,96	0/0:42,0:16:36.65:0,37,340	0/0:79,1:32:59.33:0,59,640	0/1:3,5:8:1.31:104,0,1	0/0:17,0:17:44.63:0,45,647	0/0:7,0:7:21.07:0,21,336	0/1:10,4:14:42.46:85,0,42	0/0:6,0:6:15.05:0,15,220	1/1:3,9:12:11.01:204,11,0	1/1:0,6:6:17.87:129,18,0	0/0:8,0:8:24.08:0,24,374	0/0:12,0:12:28.81:0,29,435	1/1:3,6:9:3.13:112,3,0	0/0:10,0:10:28.34:0,28,415	0/0:16,0:16:45.15:0,45,670	0/1:9,15:24:42.87:252,0,43	1/1:6,5:11:29.20:194,29,0	0/0:11,0:9:24.13:0,24,325	0/0:16,0:16:44.63:0,45,639	0/0:14,0:14:42.14:0,42,632	0/0:4,0:3:9.03:0,9,144	0/0:10,0:10:30.09:0,30,456	0/0:11,0:11:30.10:0,30,470	1/1:1,11:12:34.38:222,34,0	1/1:2,8:10:29.53:204,30,0	0/0:14,0:14:37.68:0,38,602	1/1:2,5:6:17.56:111,18,0
chr10	48926505	.	AG	A	1391.01	PASS	AB=0.647;AC=16;AF=0.286;AN=56;BaseQRankSum=9.617;DP=413;FS=11.462;HRun=1;HaplotypeScore=69.8666;InbreedingCoeff=0.6629;MQ=80.37;MQ0=18;MQRankSum=-2.372;QD=12.31;ReadPosRankSum=4.237;VQSLOD=1.0716;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:35.60:0,36,502	0/0:2,0:2:6.02:0,6,96	0/0:46,0:19:39.77:0,40,409	0/0:81,0:33:58.16:0,58,632	0/1:2,5:7:12.29:65,0,12	0/0:17,0:17:44.63:0,45,647	0/0:7,0:7:21.07:0,21,336	0/1:11,4:15:51.74:110,0,52	0/0:5,0:5:12.04:0,12,182	1/1:3,9:12:11.31:204,11,0	1/1:0,6:6:14.91:109,15,0	0/0:8,0:8:24.08:0,24,374	0/0:12,0:12:28.81:0,29,431	0/1:3,6:9:1.84:108,0,2	0/0:10,0:10:28.34:0,28,415	0/0:16,0:16:48.16:0,48,707	0/1:9,15:24:9.83:269,0,10	1/1:6,5:11:32.55:218,33,0	0/0:11,0:9:24.13:0,24,325	0/0:16,0:16:44.63:0,45,639	0/0:14,0:14:42.13:0,42,618	0/0:4,0:3:9.03:0,9,144	0/0:9,0:9:27.09:0,27,432	0/0:11,0:11:30.10:0,30,470	1/1:1,11:12:28.44:183,28,0	1/1:2,8:10:29.53:204,30,0	0/0:14,0:14:37.65:0,38,601	1/1:2,5:6:17.61:112,18,0
chr10	48929075	.	CTTT	C	3169.45	PASS	AB=0.740;AC=24;AF=0.429;AN=56;BaseQRankSum=-2.735;DP=636;FS=1.364;HRun=17;HaplotypeScore=113.8938;InbreedingCoeff=0.6423;MQ=63.94;MQ0=7;MQRankSum=-1.099;QD=9.78;ReadPosRankSum=5.037;VQSLOD=0.2545;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:29:72.81:0,73,941	0/0:7,0:8:21:0,21,265	0/0:50,1:18:11.80:0,12,242	0/0:35,0:15:20.51:0,21,207	1/1:10,17:31:45.04:448,45,0	0/0:20,0:24:66.56:0,67,910	0/0:23,0:23:55.90:0,56,853	1/1:7,17:25:30.74:447,31,0	0/0:11,0:12:21.05:0,21,332	1/1:13,13:27:2.95:370,3,0	1/1:9,12:23:14.65:232,15,0	0/0:16,0:16:24.03:0,24,322	0/0:16,0:16:21.05:0,21,268	1/1:8,7:17:23.51:217,24,0	0/0:21,0:22:38.98:0,39,541	0/0:22,0:24:30.16:0,30,604	1/1:8,14:24:44.66:422,45,0	1/1:10,14:25:8.57:350,9,0	0/1:15,0:26:4.28:4,0,49	0/1:11,2:22:40.54:43,0,41	0/1:12,1:15:13.76:52,0,14	0/0:5,0:16:35.29:0,35,396	0/0:22,0:23:35.91:0,36,412	0/0:9,0:10:9.03:0,9,136	1/1:14,17:33:44.36:432,44,0	1/1:8,8:16:6.21:225,6,0	0/1:21,1:31:83.48:83,0,134	1/1:4,1:7:4.52:46,5,0
chr10	48929172	.	TG	T	284.74	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=11.522;DP=547;FS=8.837;HRun=3;HaplotypeScore=83.1032;InbreedingCoeff=0.9921;MQ=83.31;MQ0=0;MQRankSum=-11.229;QD=3.75;ReadPosRankSum=0.934;VQSLOD=-0.2007;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:66.19:0,66,912	0/0:10,0:10:30.10:0,30,426	0/0:18,0:18:51.08:0,51,644	0/0:18,0:18:52.37:0,52,673	0/0:19,0:19:57.19:0,57,821	0/0:19,0:19:57.17:0,57,779	0/0:28,0:28:78.26:0,78,1122	0/0:25,0:25:63.20:0,63,891	0/0:18,0:18:54.18:0,54,777	0/0:14,0:14:42.14:0,42,605	0/0:13,0:13:36.12:0,36,518	1/1:7,16:23:25.95:130,26,0	1/1:3,14:17:30.29:114,30,0	0/0:19,1:20:55.15:0,55,799	0/0:18,0:18:54.18:0,54,777	0/0:20,0:20:57.19:0,57,821	0/0:37,0:37:99:0,102,1468	0/0:28,0:28:81.27:0,81,1166	0/0:21,0:21:63.20:0,63,883	0/0:12,0:12:36.08:0,36,463	0/0:38,0:38:99:0,108,1536	1/1:2,10:12:22.37:91,22,0	1/1:1,9:10:15.75:56,16,0	1/1:4,10:14:15.46:67,15,0	0/0:15,0:15:45.15:0,45,648	0/0:15,0:15:45.15:0,45,648	0/0:30,0:30:90.27:0,90,1256	0/0:11,0:11:33.11:0,33,475
chr10	48929178	.	A	ACC	879.41	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=11.869;DP=534;FS=7.211;HRun=0;HaplotypeScore=88.3412;InbreedingCoeff=0.9969;MQ=82.87;MQ0=0;MQRankSum=-11.579;QD=14.66;ReadPosRankSum=0.804;VQSLOD=3.0877;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:66.23:0,66,1073	0/0:10,0:10:27.09:0,27,441	0/0:17,0:17:51.15:0,51,783	0/0:17,0:17:51.10:0,51,705	0/0:20,0:20:57.19:0,57,929	0/0:19,0:19:57.18:0,57,901	0/0:30,0:30:87.28:0,87,1388	0/0:21,0:21:60.20:0,60,979	0/0:19,0:19:57.19:0,57,925	0/0:15,0:15:45.14:0,45,706	0/0:14,0:14:39.10:0,39,608	1/1:0,16:16:33.59:273,34,0	1/1:0,15:15:43.83:296,44,0	0/0:21,1:22:51.44:0,51,964	0/0:20,0:20:60.20:0,60,974	0/0:22,0:22:63.22:0,63,1025	0/0:36,0:36:99:0,102,1634	0/0:28,0:28:84.29:0,84,1361	0/0:19,0:19:57.19:0,57,930	0/0:11,0:11:30.10:0,30,490	0/0:35,0:35:99:0,105,1712	1/1:0,10:10:26.31:187,26,0	1/1:0,9:9:23.52:156,24,0	1/1:0,10:10:18.25:141,18,0	0/0:16,0:16:48.16:0,48,780	0/0:17,0:17:48.16:0,48,783	0/0:31,0:31:90.29:0,90,1443	0/0:11,0:11:33.11:0,33,538
chr10	48929180	.	TG	T	370.60	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=11.578;DP=548;FS=14.461;HRun=2;HaplotypeScore=80.9178;InbreedingCoeff=0.9908;MQ=83.01;MQ0=0;MQRankSum=-10.789;QD=5.98;ReadPosRankSum=1.408;VQSLOD=-0.6466;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:75.20:0,75,1057	0/0:10,0:10:30.10:0,30,447	0/0:19,0:19:54.02:0,54,744	0/0:16,0:16:42.12:0,42,582	0/0:22,0:22:63.20:0,63,918	0/0:20,0:20:60.19:0,60,876	0/0:30,0:30:90.28:0,90,1323	0/0:22,0:22:63.21:0,63,925	0/0:19,0:19:57.19:0,57,846	0/0:14,0:14:42.14:0,42,629	0/0:14,0:14:39.13:0,39,578	1/1:1,16:17:35.46:169,35,0	1/1:0,14:15:36.45:167,36,0	0/0:22,1:23:64.86:0,65,922	0/0:20,0:20:60.19:0,60,879	0/0:23,0:23:66.22:0,66,971	0/0:38,0:38:99:0,108,1491	0/0:28,0:28:81.15:0,81,1160	0/0:19,0:19:54.17:0,54,789	0/0:11,0:11:30.10:0,30,449	0/0:38,0:38:99:0,114,1638	1/1:0,10:10:18.80:70,19,0	1/1:0,9:9:19.11:73,19,0	1/1:1,10:11:13.10:65,13,0	0/0:16,0:16:48.16:0,48,719	0/0:17,0:17:51.10:0,51,737	0/0:30,0:30:90.30:0,90,1338	0/0:11,0:11:33.11:0,33,494
chr10	48930075	.	TACACACAC	T	9257.20	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=3.346;DP=642;FS=5.909;HRun=0;HaplotypeScore=179.1688;InbreedingCoeff=0.9255;MQ=62.78;MQ0=22;MQRankSum=-11.961;QD=40.60;ReadPosRankSum=1.526;VQSLOD=3.9603;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:48.16:0,48,1754	0/0:8,0:8:15.05:0,15,628	0/0:45,0:14:12.04:0,12,303	0/0:41,0:16:2:0,2,234	1/1:9,32:42:84.28:2026,84,0	0/0:29,0:29:63.20:0,63,2434	0/0:23,0:24:51.18:0,51,1986	1/1:16,6:21:18.06:433,18,0	0/0:24,0:24:66.21:0,66,2517	1/1:10,14:24:45.15:1133,45,0	1/1:7,15:23:45.15:1143,45,0	0/0:7,0:11:17.77:0,18,629	0/0:12,0:16:21.75:0,22,831	1/1:8,11:19:30.10:742,30,0	0/0:24,0:24:54.19:0,54,2163	0/0:16,0:16:36.11:0,36,1290	1/1:9,8:17:12.04:311,12,0	1/1:4,4:8:6.02:155,6,0	0/0:11,0:19:39.13:0,39,1254	0/0:12,0:31:52.72:0,53,1755	0/0:10,0:14:6.91:0,7,182	0/0:7,0:12:24.08:0,24,779	0/0:18,0:29:54.87:0,55,1957	0/0:16,0:19:32.84:0,33,1006	1/1:10,17:27:42.14:1064,42,0	1/1:9,24:34:72.24:1784,72,0	0/0:5,0:14:27.09:0,27,939	1/1:2,10:11:18.06:466,18,0
chr10	48930104	.	TA	T	1343.81	PASS	AB=0.958;AC=12;AF=0.214;AN=56;BaseQRankSum=3.172;DP=581;FS=5.001;HRun=7;HaplotypeScore=124.9175;InbreedingCoeff=0.7931;MQ=58.21;MQ0=14;MQRankSum=3.288;QD=9.14;ReadPosRankSum=-0.797;VQSLOD=1.1373;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:62.71:0,63,912	0/0:8,0:8:24.06:0,24,279	0/1:32,1:11:26.47:26,0,100	0/1:31,2:13:6.70:7,0,187	0/0:40,0:40:87:0,87,946	0/0:26,0:26:66.06:0,66,794	0/0:21,0:21:48.57:0,49,574	0/0:20,0:19:54.17:0,54,667	0/0:23,0:23:64.45:0,64,795	0/0:23,0:23:69.19:0,69,812	0/0:19,0:19:53.94:0,54,574	1/1:6,5:10:17.16:155,17,0	1/1:4,10:13:28.43:256,28,0	0/0:14,0:14:33.10:0,33,388	0/0:23,0:23:63.19:0,63,779	0/0:15,0:15:39.11:0,39,478	0/0:16,0:16:33.06:0,33,384	0/0:11,0:11:27.09:0,27,334	0/0:17,0:16:48.14:0,48,592	0/0:31,0:31:78.56:0,79,923	0/0:8,0:8:10.23:0,10,99	1/1:7,10:17:35.99:361,36,0	1/1:5,16:21:46.61:436,47,0	1/1:4,13:15:28.44:283,28,0	0/0:23,0:23:59.91:0,60,671	0/0:36,0:36:99:0,102,1209	0/0:15,0:15:42.13:0,42,526	0/0:16,0:15:30.09:0,30,363
chr10	48931957	.	T	TA	6169.24	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=16.170;DP=548;FS=1.164;HRun=3;HaplotypeScore=145.1109;InbreedingCoeff=0.9827;MQ=83.80;MQ0=0;MQRankSum=-15.310;QD=23.46;ReadPosRankSum=1.380;VQSLOD=4.0522;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:51.16:0,51,612	0/0:10,0:10:27.08:0,27,324	0/0:24,0:24:66.18:0,66,764	0/0:23,0:22:51.06:0,51,562	1/1:7,12:19:35.44:421,35,0	0/0:19,0:19:57.14:0,57,659	0/0:11,0:11:33.09:0,33,385	1/1:16,12:28:26.08:507,26,0	0/0:27,0:27:75.18:0,75,863	1/1:5,13:18:42.13:527,42,0	1/1:4,14:18:39.12:480,39,0	0/0:18,0:18:54.17:0,54,647	0/0:20,0:20:57.16:0,57,672	1/1:7,20:27:60.19:741,60,0	0/0:32,0:32:90.28:0,90,1080	0/0:33,0:33:99:0,99,1177	1/1:4,8:12:14.72:258,15,0	1/1:3,5:8:15.05:192,15,0	1/1:7,6:13:22.27:314,22,0	1/1:4,15:19:41.56:560,42,0	1/1:3,5:8:17.29:159,17,0	0/0:21,0:21:63.19:0,63,755	0/0:13,0:13:36.11:0,36,431	0/0:17,0:17:45.14:0,45,539	1/1:10,11:21:33.10:415,33,0	1/1:12,16:28:47.54:646,48,0	1/1:13,17:29:42:670,42,0	1/1:6,8:14:7.60:280,8,0
chr10	48931961	.	C	CA	4422.11	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=17.535;DP=479;FS=5.651;HRun=3;HaplotypeScore=140.5775;InbreedingCoeff=0.9920;MQ=88.73;MQ0=0;MQRankSum=-16.869;QD=23.03;ReadPosRankSum=2.329;VQSLOD=4.1320;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:54.15:0,54,685	0/0:9,0:9:27.09:0,27,351	0/0:24,0:24:59.96:0,60,714	0/0:23,0:22:60.11:0,60,712	1/1:2,10:12:28.94:200,29,0	0/0:20,0:20:54.15:0,54,685	0/0:12,0:12:33.11:0,33,429	1/1:1,11:20:39.36:394,39,0	0/0:24,0:24:72.23:0,72,935	1/1:0,13:13:39.07:381,39,0	1/1:0,14:14:38.94:334,39,0	0/0:18,0:18:54.18:0,54,699	0/0:20,0:20:60.20:0,60,779	1/1:0,20:20:59.98:533,60,0	0/0:33,0:33:99:0,99,1256	0/0:35,0:35:99:0,99,1286	1/1:1,8:11:20.93:201,21,0	1/1:1,4:5:12.02:118,12,0	1/1:0,6:9:15.18:171,15,0	1/1:1,14:16:47.80:404,48,0	1/1:0,5:7:19.99:132,20,0	0/0:21,0:21:63.19:0,63,805	0/0:12,0:12:33.11:0,33,429	0/0:18,0:18:51.17:0,51,660	1/1:0,11:11:32.24:282,32,0	1/1:0,16:18:54.05:520,54,0	1/1:2,16:22:46.17:444,46,0	1/1:0,8:13:35.88:309,36,0
chr10	48931963	.	T	TATGC	12386.80	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=17.684;DP=480;FS=2.596;HRun=0;HaplotypeScore=137.4170;InbreedingCoeff=0.9934;MQ=90.01;MQ0=0;MQRankSum=-16.978;QD=64.18;ReadPosRankSum=2.859;VQSLOD=7.0081;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:54.19:0,54,1127	0/0:9,0:9:27.09:0,27,566	0/0:24,0:24:63.15:0,63,1197	0/0:24,0:23:63.14:0,63,1171	1/1:1,10:11:22.78:461,23,0	0/0:19,0:19:57.20:0,57,1161	0/0:12,0:12:36.12:0,36,724	1/1:9,11:20:56.21:1192,56,0	0/0:24,0:24:72.25:0,72,1510	1/1:3,13:16:42.14:1028,42,0	1/1:0,14:14:39.13:971,39,0	0/0:18,0:18:54.19:0,54,1112	0/0:20,0:20:60.21:0,60,1258	1/1:0,20:20:60.21:1524,60,0	0/0:34,0:34:99:0,99,2029	0/0:36,0:36:99:0,105,2152	1/1:2,8:11:30.10:689,30,0	1/1:0,4:4:12.04:309,12,0	1/1:3,6:9:21.06:502,21,0	1/1:1,14:15:44.64:1042,45,0	1/1:2,5:7:18.05:362,18,0	0/0:20,0:20:60.20:0,60,1208	0/0:11,0:11:33.11:0,33,692	0/0:18,0:18:51.16:0,51,1002	1/1:0,11:11:30.10:763,30,0	1/1:3,16:19:53.55:1300,54,0	1/1:7,16:22:60.20:1400,60,0	1/1:5,8:13:36.12:843,36,0
chr10	48933039	.	CTTGTAACACATTTAACAGAAAGTGTTTAAG	C	7605.41	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=5.996;DP=651;FS=7.615;HRun=0;HaplotypeScore=450.1589;InbreedingCoeff=0.9124;MQ=91.07;MQ0=0;MQRankSum=-7.052;QD=47.24;ReadPosRankSum=0.038;VQSLOD=1.7952;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:81.19:0,81,9041	0/0:9,0:9:24.08:0,24,2764	0/0:30,0:30:69.24:0,69,3207	0/0:25,0:25:39.13:0,39,2110	1/1:3,12:15:2.92:17,3,0	0/0:27,0:27:72.25:0,72,8326	0/0:18,0:18:48.15:0,48,4405	1/1:25,0:25:33.06:636,33,0	0/0:31,0:31:78.27:0,78,9035	1/1:5,16:21:33.71:1181,34,0	1/1:1,4:5:6.02:467,6,0	0/0:19,0:19:54.19:0,54,4971	0/0:22,0:22:63.20:0,63,7942	1/1:2,21:23:14.82:1167,15,0	0/0:42,0:42:99:0,111,11810	0/0:32,0:32:84.26:0,84,7768	1/1:5,20:25:6.02:467,6,0	1/1:9,0:9:18.06:457,18,0	0/0:32,0:32:69.24:0,69,5544	0/0:23,0:23:60.19:0,60,6352	0/0:38,0:38:99:0,102,10962	0/0:27,0:27:72.25:0,72,6530	0/0:26,0:26:78.23:0,78,8077	0/0:24,0:24:66.20:0,66,6836	1/1:3,6:9:9.03:701,9,0	1/1:4,19:23:51.06:2046,51,0	0/0:33,0:33:75.25:0,75,6688	1/1:2,4:6:6.02:467,6,0
chr10	48933051	.	T	TAA	1346.58	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=7.094;DP=613;FS=3.865;HRun=0;HaplotypeScore=106.4435;InbreedingCoeff=0.5636;MQ=91.73;MQ0=0;MQRankSum=-4.649;QD=17.72;ReadPosRankSum=-1.293;VQSLOD=3.2020;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:93.23:0,93,1467	0/0:9,0:9:27.09:0,27,440	0/0:32,0:32:96.31:0,96,1481	0/0:21,0:21:54.15:0,54,810	1/1:12,0:12:2.92:17,3,0	0/0:27,0:27:81.26:0,81,1297	0/0:19,0:19:57.18:0,57,904	1/1:0,9:12:33.06:495,33,0	0/0:32,0:32:96.33:0,96,1566	0/1:16,0:16:7.55:288,0,8	1/1:4,0:4:6.02:70,6,0	0/0:21,0:21:60.20:0,60,958	0/0:23,0:23:69.22:0,69,1100	0/0:21,0:21:13.77:0,14,66	0/0:45,0:45:99:0,129,2096	0/0:29,0:29:87.27:0,87,1372	0/0:20,0:20:5.54:0,6,25	1/1:0,7:7:21.07:397,21,0	0/0:29,0:29:84.29:0,84,1368	0/0:24,0:24:66.21:0,66,1052	0/0:38,0:38:99:0,111,1783	0/0:27,0:27:78.25:0,78,1219	0/0:29,0:29:84.25:0,84,1298	0/0:22,0:22:66.20:0,66,1029	0/1:6,0:6:17.94:24,0,18	0/1:19,0:19:36.32:213,0,36	0/0:34,0:34:93.25:0,93,1432	0/0:4,0:4:4.35:0,4,17
chr10	48933485	.	GT	G	7684.12	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=19.095;DP=601;FS=17.503;HRun=2;HaplotypeScore=116.6159;InbreedingCoeff=0.9792;MQ=80.82;MQ0=0;MQRankSum=-10.142;QD=34.00;ReadPosRankSum=0.310;VQSLOD=2.9520;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,123,1803	0/0:15,0:15:45.15:0,45,670	0/0:22,0:22:18.69:0,19,702	0/0:14,0:13:36.10:0,36,488	1/1:0,17:17:30.06:376,30,0	0/0:26,0:26:75.25:0,75,1121	0/0:26,0:26:78.26:0,78,1167	1/1:1,21:22:54.15:685,54,0	0/0:22,0:22:66.18:0,66,928	1/1:0,19:19:57.18:736,57,0	1/1:0,7:7:21.06:260,21,0	0/0:34,0:34:99:0,99,1482	0/0:24,0:24:72.24:0,72,1076	1/1:0,16:16:48.16:620,48,0	0/0:34,0:34:99:0,99,1483	0/0:38,0:38:99:0,114,1689	1/1:0,25:25:66.21:856,66,0	1/1:0,11:11:30.10:389,30,0	1/1:0,10:10:30.10:388,30,0	1/1:0,7:7:12.04:155,12,0	1/1:0,46:46:99:1606,129,0	0/0:21,0:21:63.20:0,63,923	0/0:13,0:13:39.12:0,39,565	0/0:43,0:43:99:0,129,1933	1/1:0,9:9:21.07:272,21,0	1/1:0,23:23:66.19:838,66,0	1/1:0,11:11:33.11:426,33,0	1/1:1,2:3:6.02:78,6,0
chr10	48933913	.	A	ACCCAAG	28976.45	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=15.111;DP=791;FS=0.859;HRun=0;HaplotypeScore=172.4527;InbreedingCoeff=0.9760;MQ=88.57;MQ0=0;MQRankSum=-20.308;QD=81.17;ReadPosRankSum=-2.633;VQSLOD=4.6562;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,163,3780	0/0:11,0:11:33.11:0,33,777	0/0:37,0:37:99:0,108,2443	0/0:34,0:34:84.26:0,84,1850	1/1:9,28:41:99:3332,112,0	0/0:30,0:30:84.29:0,84,1929	0/0:32,0:32:81.28:0,81,1884	1/1:25,16:40:99:3157,102,0	0/0:40,0:40:99:0,117,2716	1/1:9,23:34:96.33:3176,96,0	1/1:4,20:26:69.19:2212,69,0	0/0:26,0:26:78.25:0,78,1773	0/0:30,0:30:84.27:0,84,1933	1/1:8,23:34:90.31:3098,90,0	0/0:23,0:23:63.22:0,63,1490	0/0:35,0:35:99:0,99,2315	1/1:6,10:18:27.09:960,27,0	1/1:3,8:11:33.11:1041,33,0	1/1:11,13:23:63.69:1948,64,0	1/1:9,13:23:60.20:1759,60,0	1/1:9,11:22:48.08:1469,48,0	0/0:23,0:23:63.22:0,63,1483	0/0:16,0:16:48.15:0,48,1049	0/0:42,0:42:99:0,123,2750	1/1:8,12:21:49.94:1452,50,0	1/1:6,20:27:81.26:2548,81,0	1/1:4,24:27:78.27:2717,78,0	1/1:0,1:2:3.01:107,3,0
chr10	48934577	.	CCT	C	9429.71	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=19.382;DP=661;FS=4.615;HRun=0;HaplotypeScore=157.7339;InbreedingCoeff=0.9989;MQ=81.04;MQ0=0;MQRankSum=-4.476;QD=31.22;ReadPosRankSum=0.827;VQSLOD=6.6939;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,132,2271	0/0:9,0:9:27.09:0,27,467	0/0:34,0:34:66.58:0,67,1181	0/0:26,0:27:62.80:0,63,1024	1/1:5,21:26:63.20:828,63,0	0/0:25,0:25:66.22:0,66,1133	0/0:27,0:27:72.23:0,72,1203	1/1:5,16:21:45.13:582,45,0	0/0:33,0:33:93.29:0,93,1553	1/1:3,11:14:33.08:421,33,0	1/1:1,21:22:57.19:753,57,0	0/0:33,0:33:84.27:0,84,1424	0/0:18,0:18:48.16:0,48,824	1/1:1,21:22:57.19:759,57,0	0/0:23,0:23:66.23:0,66,1143	0/0:28,0:28:78.26:0,78,1325	1/1:3,22:25:66.22:878,66,0	1/1:4,8:12:21.07:279,21,0	1/1:2,10:12:30.07:371,30,0	1/1:4,27:31:78.26:1038,78,0	1/1:5,31:35:72.13:951,72,0	0/0:20,0:20:57.17:0,57,933	0/0:15,0:15:33.10:0,33,544	0/0:23,0:23:57.20:0,57,986	1/1:4,17:21:51.17:678,51,0	1/1:6,21:27:66.19:860,66,0	1/1:3,20:23:54.18:713,54,0	1/1:1,9:10:24.08:319,24,0
chr10	48935182	.	A	AG	13304.55	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=9.295;DP=599;FS=5.408;HRun=5;HaplotypeScore=82.3711;InbreedingCoeff=0.9981;MQ=80.79;MQ0=0;MQRankSum=-2.723;QD=35.01;ReadPosRankSum=3.455;VQSLOD=4.7425;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:42.09:0,42,443	0/0:9,0:9:27.07:0,27,289	0/0:15,0:15:42.11:0,42,450	0/0:19,0:19:44.63:0,45,384	1/1:0,35:35:99:1381,105,0	0/0:30,0:30:87.20:0,87,927	0/0:10,0:10:27.07:0,27,290	1/1:3,32:35:99:1276,99,0	0/0:16,0:16:48.10:0,48,507	1/1:3,42:45:99:1615,126,0	1/1:3,35:38:99:1288,99,0	0/0:9,0:9:27.07:0,27,290	0/0:9,0:9:24.03:0,24,243	1/1:5,12:17:33.11:433,33,0	0/0:19,0:19:57.14:0,57,613	0/0:18,0:18:45.11:0,45,484	1/1:0,17:17:45.15:592,45,0	1/1:5,13:18:36.07:474,36,0	1/1:0,11:11:33.10:420,33,0	1/1:2,28:30:81.26:1062,81,0	1/1:2,14:16:42.08:517,42,0	0/0:17,0:17:48.12:0,48,515	0/0:26,0:26:78.15:0,78,815	0/0:7,0:7:18.04:0,18,193	1/1:0,30:30:84.27:1105,84,0	1/1:1,29:30:87.28:1142,87,0	1/1:0,42:42:99:1460,111,0	1/1:4,12:16:42.59:538,43,0
chr10	48935959	.	A	AC	4017	PASS	AB=1.000;AC=19;AF=0.413;AN=46;BaseQRankSum=10.429;DP=489;FS=6.603;HRun=1;HaplotypeScore=65.4163;InbreedingCoeff=0.8805;MQ=71.93;MQ0=18;MQRankSum=-12.577;QD=25.11;ReadPosRankSum=-1.358;VQSLOD=2.8354;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,2:39:96.31:0,96,1245	0/0:12,0:12:36.12:0,36,466	0/0:30,0:19:9.63:0,10,401	0/1:34,0:16:37.36:37,0,353	1/1:1,17:16:27.09:401,27,0	0/0:19,0:19:39.13:0,39,506	0/0:17,0:17:45.15:0,45,584	./.	0/0:21,2:21:48.13:0,48,622	1/1:0,23:21:63.21:942,63,0	1/1:3,12:13:27.09:402,27,0	0/0:23,1:23:51.16:0,51,661	0/0:20,2:20:45.05:0,45,583	./.	0/0:27,1:27:51.17:0,51,661	0/0:33,1:33:66.21:0,66,856	./.	1/1:1,1:2:6.02:90,6,0	./.	1/1:3,18:20:45.15:673,45,0	./.	0/0:31,0:31:93.30:0,93,1208	0/0:17,0:16:45.13:0,45,570	0/0:19,0:19:44.57:0,45,568	1/1:0,15:14:36.12:538,36,0	1/1:3,7:9:18.06:269,18,0	1/1:4,10:11:24.08:358,24,0	1/1:2,6:7:21.07:306,21,0
chr10	48936159	.	C	CTGTG	7263.10	PASS	AB=0.615;AC=27;AF=0.482;AN=56;BaseQRankSum=10.781;DP=398;FS=203.692;HRun=0;HaplotypeScore=75.9705;InbreedingCoeff=0.8687;MQ=63.55;MQ0=9;MQRankSum=-13.577;QD=51.88;ReadPosRankSum=-0.704;VQSLOD=0.7226;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:81.26:0,81,1399	0/0:9,1:9:27.09:0,27,472	0/0:17,0:12:32.32:0,32,535	0/0:31,0:21:52.30:0,52,979	1/1:1,11:8:18.06:452,18,0	0/0:21,0:19:54.18:0,54,955	0/0:19,0:19:51.17:0,51,872	0/1:6,10:16:14.25:851,0,14	0/0:14,0:12:30.08:0,30,489	1/1:2,7:9:27.05:620,27,0	1/1:6,7:12:30.10:771,30,0	0/0:16,0:16:33.11:0,33,565	0/0:19,0:19:51.16:0,51,870	1/1:5,9:17:30.10:759,30,0	0/0:12,0:12:27.09:0,27,481	0/0:24,0:24:60.19:0,60,1039	1/1:2,16:18:42.14:1043,42,0	1/1:4,5:9:21.07:509,21,0	1/1:6,1:7:6.02:120,6,0	1/1:0,8:7:21.07:540,21,0	1/1:3,1:4:3.01:77,3,0	0/0:9,0:9:27.09:0,27,480	0/0:11,0:10:21.07:0,21,374	0/0:20,0:20:29.97:0,30,526	1/1:1,3:4:9.03:231,9,0	1/1:5,8:13:30.10:753,30,0	1/1:2,2:5:9.03:229,9,0	1/1:0,4:4:12.04:309,12,0
chr10	48936645	.	A	AATAT	14690.28	PASS	AB=0.800;AC=27;AF=0.482;AN=56;BaseQRankSum=13.253;DP=433;FS=25.599;HRun=0;HaplotypeScore=146.2354;InbreedingCoeff=0.9233;MQ=73.01;MQ0=0;MQRankSum=-15.251;QD=57.38;ReadPosRankSum=-2.277;VQSLOD=3.3922;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:39.13:0,39,740	0/0:7,0:7:21.07:0,21,384	0/0:16,0:16:39.09:0,39,651	0/0:7,0:7:21.04:0,21,346	1/1:8,25:34:75.24:1940,75,0	0/0:22,0:22:60.21:0,60,1139	0/0:6,0:6:18.06:0,18,342	1/1:12,19:31:87.24:2154,87,0	0/0:11,0:11:33.10:0,33,595	1/1:6,18:24:63.22:1686,63,0	1/1:6,10:17:48.15:1162,48,0	0/0:9,0:9:27.09:0,27,513	0/0:15,0:15:42.12:0,42,727	1/1:3,8:11:27.09:726,27,0	0/0:18,0:18:48.16:0,48,904	0/0:18,0:18:54.19:0,54,1019	0/1:3,1:4:47.89:152,0,48	1/1:5,8:13:30.06:735,30,0	1/1:13,0:13:30.10:644,30,0	1/1:22,0:22:66.20:1018,66,0	1/1:6,0:6:18.06:335,18,0	0/0:14,0:14:39.12:0,39,708	0/0:12,0:12:35.95:0,36,640	0/0:8,0:8:24.08:0,24,456	1/1:5,10:15:39.13:1018,39,0	1/1:12,15:27:56.41:1457,56,0	1/1:29,0:29:81.23:1353,81,0	1/1:7,3:10:17.99:310,18,0
chr10	48936655	.	GTTA	G	2795.01	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=9.596;DP=398;FS=5.211;HRun=0;HaplotypeScore=165.5367;InbreedingCoeff=0.9709;MQ=75.92;MQ0=0;MQRankSum=-8.286;QD=51.76;ReadPosRankSum=3.193;VQSLOD=5.0081;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:48.16:0,48,1183	0/0:8,0:8:24.08:0,24,593	0/0:15,0:15:45.13:0,45,938	0/0:9,0:9:27.09:0,27,596	0/0:33,0:33:87.27:0,87,2005	0/0:20,0:20:60.21:0,60,1460	0/0:6,0:6:18.06:0,18,444	0/0:31,0:31:90.27:0,90,2116	0/0:11,0:11:33.11:0,33,814	0/0:22,0:22:66.23:0,66,1602	0/0:16,0:16:48.13:0,48,1092	0/0:10,0:10:30.10:0,30,740	0/0:14,0:14:42.14:0,42,1038	0/0:11,0:11:33.11:0,33,744	0/0:17,0:17:51.18:0,51,1256	0/0:19,0:19:57.20:0,57,1406	0/0:3,0:3:9.03:0,9,221	0/0:9,0:9:27.09:0,27,645	1/1:0,6:6:15.05:279,15,0	1/1:0,19:19:57.20:1060,57,0	1/1:0,6:6:18.06:330,18,0	0/0:12,0:12:36.12:0,36,869	0/0:13,0:13:39.13:0,39,942	0/0:8,0:8:24.08:0,24,592	0/0:14,0:14:42.14:0,42,997	0/0:21,0:21:63.17:0,63,1415	1/1:0,23:23:69.24:1283,69,0	0/0:6,0:6:18.06:0,18,443
chr10	48936671	.	A	ATG	12742.34	PASS	AB=0.571;AC=27;AF=0.482;AN=56;BaseQRankSum=13.914;DP=427;FS=29.064;HRun=0;HaplotypeScore=145.9648;InbreedingCoeff=0.9227;MQ=72.60;MQ0=0;MQRankSum=-15.860;QD=53.54;ReadPosRankSum=1.296;VQSLOD=2.9702;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:39.13:0,39,636	0/0:11,0:11:30.10:0,30,487	0/0:14,0:14:35.60:0,36,530	0/0:8,0:8:21.07:0,21,330	1/1:2,27:29:74.28:1460,74,0	0/0:17,0:17:48.16:0,48,783	0/0:7,0:7:21.06:0,21,319	1/1:3,25:28:81.28:1633,81,0	0/0:13,0:13:39.13:0,39,634	1/1:1,17:18:54.19:1091,54,0	1/1:5,15:20:45.15:901,45,0	0/0:12,0:12:36.12:0,36,587	0/0:21,0:21:63.21:0,63,1007	1/1:1,10:11:30.10:593,30,0	0/0:17,0:17:51.17:0,51,829	0/0:18,0:18:54.18:0,54,860	0/1:1,3:4:36.78:170,0,37	1/1:1,6:7:18.06:365,18,0	1/1:3,12:15:45.14:850,45,0	1/1:6,25:31:75.26:1516,75,0	1/1:0,6:6:15.05:303,15,0	0/0:14,0:14:42.14:0,42,679	0/0:15,0:15:45.14:0,45,710	0/0:9,0:9:27.09:0,27,438	1/1:2,13:15:39.13:789,39,0	1/1:2,15:17:51.18:1029,51,0	1/1:3,27:30:84.29:1678,84,0	1/1:1,6:7:18.06:364,18,0
chr10	48936730	.	TAA	T	3856.69	PASS	AB=0.560;AC=20;AF=0.357;AN=56;BaseQRankSum=15.085;DP=382;FS=0.402;HRun=2;HaplotypeScore=137.0919;InbreedingCoeff=0.2982;MQ=91.07;MQ0=0;MQRankSum=-14.599;QD=25.21;ReadPosRankSum=5.036;VQSLOD=2.6288;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:52.06:0,52,1037	0/0:12,0:12:36.12:0,36,732	0/0:25,0:25:46.01:0,46,1353	0/0:13,0:13:39.13:0,39,736	1/1:1,27:28:5.37:561,5,0	0/0:15,0:15:45.15:0,45,905	0/0:9,0:9:27.09:0,27,549	1/1:2,9:11:33.10:402,33,0	0/0:19,0:19:57.18:0,57,1097	0/1:1,5:6:24.78:156,0,25	1/1:0,17:17:43.48:452,43,0	0/0:17,0:17:48.16:0,48,976	0/0:23,0:23:66.21:0,66,1295	0/1:1,7:8:17.77:184,0,18	0/0:18,0:18:54.19:0,54,1088	0/0:16,0:16:48.16:0,48,976	0/1:1,2:2:49.90:59,0,50	1/1:0,4:4:9.03:107,9,0	0/1:1,2:3:50.04:64,0,50	0/1:2,15:17:66.51:471,0,67	0/1:1,2:3:14.80:15,0,48	0/0:20,0:20:60.21:0,60,1210	0/0:16,0:16:48.16:0,48,975	0/0:8,0:8:21.07:0,21,427	0/1:1,11:12:25.29:314,0,25	1/1:2,13:15:0.26:383,0,0	0/1:4,18:22:99:565,0,127	1/1:0,4:4:12.01:124,12,0
chr10	48936733	.	TCTAGTGTGA	T	10279.99	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=16.207;DP=390;FS=2.800;HRun=0;HaplotypeScore=175.8545;InbreedingCoeff=0.9627;MQ=91.08;MQ0=0;MQRankSum=-16.346;QD=64.25;ReadPosRankSum=1.795;VQSLOD=4.8727;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:54.19:0,54,2493	0/0:12,0:12:36.12:0,36,1652	0/0:26,0:26:78.26:0,78,2872	0/0:13,0:13:36.12:0,36,1435	1/1:2,27:29:74.84:1663,75,0	0/0:16,0:16:48.16:0,48,2219	0/0:9,0:9:27.09:0,27,1236	1/1:2,9:11:33.06:769,33,0	0/0:18,0:18:51.16:0,51,1972	1/1:2,5:7:20.99:437,21,0	1/1:2,17:19:57.17:1255,57,0	0/0:17,0:17:48.15:0,48,2156	0/0:23,0:23:63.22:0,63,2731	1/1:1,7:8:21.04:491,21,0	0/0:18,0:18:54.19:0,54,2405	0/0:16,0:16:48.15:0,48,2233	1/1:1,2:2:9:177,9,0	1/1:0,4:4:9.50:240,10,0	1/1:1,2:3:9:182,9,0	1/1:3,15:18:54.11:1254,54,0	1/1:1,2:3:9:131,9,0	0/0:19,0:19:57.20:0,57,2740	0/0:17,0:17:48.16:0,48,2172	0/0:8,0:8:21.07:0,21,985	1/1:1,11:12:36.09:854,36,0	1/1:2,13:15:39.10:973,39,0	1/1:6,18:24:72.04:1552,72,0	1/1:0,4:4:12.04:302,12,0
chr10	48936740	.	TGA	T	3588.26	PASS	AB=0.965;AC=20;AF=0.357;AN=56;BaseQRankSum=15.270;DP=408;FS=1.730;HRun=0;HaplotypeScore=150.7488;InbreedingCoeff=0.4066;MQ=87.05;MQ0=0;MQRankSum=-14.651;QD=20.39;ReadPosRankSum=3.553;VQSLOD=4.2542;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:60.18:0,60,1166	0/0:13,0:13:39.11:0,39,721	0/0:23,0:23:60.16:0,60,1132	0/0:14,0:13:36.09:0,36,664	1/1:30,1:31:37.23:564,37,0	0/0:16,0:16:48.16:0,48,975	0/0:10,0:10:30.10:0,30,609	0/1:13,1:14:44.40:292,0,44	0/0:15,0:15:45.15:0,45,913	0/1:7,1:8:28.32:156,0,28	1/1:22,0:22:49.41:487,49,0	0/0:17,0:17:48.15:0,48,936	0/0:22,0:22:63.20:0,63,1243	0/1:8,1:9:4.70:179,0,5	0/0:19,0:19:57.18:0,57,1122	0/0:18,0:18:54.17:0,54,1049	0/1:3,0:2:19.73:50,0,20	1/1:4,0:4:11.99:113,12,0	0/1:4,0:4:44.43:51,0,44	0/1:18,0:18:3.42:421,0,3	0/1:3,0:3:8.35:8,0,25	0/0:19,0:19:57.20:0,57,1156	0/0:18,0:18:54.16:0,54,1024	0/0:8,0:8:21.07:0,21,426	1/1:13,1:14:7.82:313,8,0	1/1:15,0:15:10.25:337,10,0	0/1:27,0:27:94.43:511,0,94	1/1:4,0:4:11.96:106,12,0
chr10	48936742	.	A	ACTTTT	5878.95	PASS	AB=0.905;AC=18;AF=0.321;AN=56;BaseQRankSum=1.899;DP=437;FS=8.518;HRun=0;HaplotypeScore=182.4799;InbreedingCoeff=0.2769;MQ=84.59;MQ0=0;MQRankSum=-10.435;QD=29.39;ReadPosRankSum=-8.779;VQSLOD=1.2924;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:60.21:0,60,1259	0/0:12,0:12:33.11:0,33,703	0/0:24,0:24:57.19:0,57,1109	0/0:13,0:12:24.08:0,24,474	0/1:30,2:33:19.05:919,0,19	0/0:16,0:16:48.16:0,48,1023	0/0:10,0:10:30.10:0,30,640	1/1:15,3:18:31.59:953,32,0	0/0:15,0:15:45.14:0,45,920	1/1:7,2:9:1.99:325,2,0	0/1:20,3:23:30.97:670,0,31	0/0:18,0:18:48.15:0,48,984	0/0:22,0:22:57.18:0,57,1176	0/1:10,1:11:17.65:165,0,18	0/0:19,0:19:54.18:0,54,1137	0/0:18,0:18:54.19:0,54,1124	1/1:3,1:3:3.88:162,4,0	0/1:4,0:4:6.96:32,0,7	1/1:8,2:10:19.20:716,19,0	0/1:18,3:21:38.64:282,0,39	1/1:3,1:4:9.03:281,9,0	0/0:19,0:19:51.18:0,51,1087	0/0:19,0:19:57.18:0,57,1148	0/0:8,0:8:21.07:0,21,448	0/1:14,1:15:21.07:312,0,21	0/1:18,2:20:27.93:319,0,28	0/1:21,7:28:34.05:743,0,34	0/0:4,0:4:9.62:0,10,39
chr10	48936780	.	C	CA	16001.36	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-4.235;DP=503;FS=2.665;HRun=0;HaplotypeScore=93.0816;InbreedingCoeff=0.9925;MQ=73.64;MQ0=0;MQRankSum=-4.660;QD=44.20;ReadPosRankSum=0.373;VQSLOD=4.8746;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:57.19:0,57,795	0/0:9,0:9:27.08:0,27,358	0/0:13,0:13:36.11:0,36,475	0/0:11,0:10:30.09:0,30,402	1/1:0,43:43:99:1904,120,0	0/0:23,0:23:69.20:0,69,930	0/0:10,0:10:30.10:0,30,419	1/1:0,30:30:90.31:1438,90,0	0/0:16,0:16:48.16:0,48,671	1/1:0,17:18:51.17:815,51,0	1/1:0,21:21:63.21:1004,63,0	1/1:0,16:16:45.15:720,45,0	1/1:0,16:16:42.14:671,42,0	1/1:0,12:12:33.11:526,33,0	0/0:21,0:21:60.20:0,60,835	0/0:19,0:19:57.19:0,57,796	1/1:0,7:7:18.06:287,18,0	1/1:0,8:8:24.08:382,24,0	1/1:1,18:19:54.18:857,54,0	1/1:0,27:27:78.27:1245,78,0	1/1:3,9:12:30.02:448,30,0	1/1:0,20:20:57.19:911,57,0	1/1:0,15:15:42.14:672,42,0	1/1:0,6:6:12.04:192,12,0	1/1:1,20:21:44.20:848,44,0	1/1:0,29:29:81.28:1292,81,0	1/1:2,32:34:93.27:1455,93,0	1/1:0,8:8:21.07:336,21,0
chr10	48937248	.	AAC	A	2431.69	PASS	AB=0.919;AC=33;AF=0.660;AN=50;BaseQRankSum=5.882;DP=591;FS=0.000;HRun=0;HaplotypeScore=77.7577;InbreedingCoeff=0.1172;MQ=56.69;MQ0=9;MQRankSum=-0.843;QD=5.39;ReadPosRankSum=0.776;VQSLOD=2.6183;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:35:38.76:0,39,431	0/0:5,0:6:3:0,3,26	./.	./.	0/1:9,10:20:17.84:177,0,18	0/1:17,2:19:20.60:21,0,118	0/1:18,1:18:17.69:18,0,111	1/1:29,0:29:2.95:24,3,0	0/1:16,1:18:42.34:42,0,331	1/1:14,7:23:20.71:184,21,0	1/1:12,10:22:21.06:228,21,0	1/1:10,9:21:20.71:187,21,0	0/1:16,1:18:28.22:59,0,28	1/1:11,3:14:6.02:65,6,0	0/1:25,1:27:25.38:25,0,327	0/0:22,0:20:35.91:0,36,496	1/1:13,11:24:33.07:351,33,0	1/1:11,6:18:17.80:161,18,0	./.	0/1:25,1:26:6.40:6,0,290	0/1:33,0:29:80.71:81,0,141	1/1:14,10:24:29.93:297,30,0	1/1:10,10:20:20.99:215,21,0	1/1:20,13:33:21.06:228,21,0	1/1:7,7:14:8.98:83,9,0	1/1:13,8:21:11.93:97,12,0	0/0:20,2:21:7.03:0,7,368	0/1:8,0:8:35.62:49,0,36
chr10	48937600	.	GA	G	2126.10	PASS	AB=0.789;AC=29;AF=0.518;AN=56;BaseQRankSum=2.306;DP=417;FS=2.533;HRun=12;HaplotypeScore=79.2109;InbreedingCoeff=0.6883;MQ=38.30;MQ0=31;MQRankSum=-3.820;QD=10.17;ReadPosRankSum=1.785;VQSLOD=3.3778;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:25:48.80:0,49,425	0/0:7,0:8:14.85:0,15,124	0/0:29,0:5:10.71:0,11,68	0/0:33,0:3:8.22:0,8,40	0/1:8,6:14:18.42:57,0,18	0/0:16,0:15:36.03:0,36,346	0/0:5,0:5:2.97:0,3,20	1/1:7,11:18:31.89:236,32,0	0/0:12,0:11:21.01:0,21,194	1/1:6,10:15:32.85:252,33,0	1/1:8,5:12:13.88:93,14,0	1/1:3,5:7:17.90:136,18,0	1/1:3,5:9:10.97:73,11,0	1/1:10,4:14:9.32:145,9,0	0/0:19,0:19:29.94:0,30,261	0/1:10,1:11:4.93:5,0,121	1/1:7,6:12:20.86:157,21,0	1/1:13,6:15:26.88:207,27,0	0/0:16,0:12:23.93:0,24,198	0/0:16,0:16:11.73:0,12,77	0/0:11,0:10:0:0,0,0	0/1:8,3:12:12.31:97,0,12	1/1:2,2:4:5.97:46,6,0	1/1:4,4:7:5.96:46,6,0	1/1:4,10:13:20.90:162,21,0	1/1:7,12:19:44.81:346,45,0	0/0:12,0:12:17.94:0,18,142	1/1:9,6:15:37.73:271,38,0
chr10	48937614	.	TAAAAA	T	3455.45	PASS	AB=0.996;AC=30;AF=0.536;AN=56;BaseQRankSum=11.439;DP=534;FS=2.803;HRun=14;HaplotypeScore=119.2027;InbreedingCoeff=0.3536;MQ=37.60;MQ0=49;MQRankSum=-5.137;QD=10.60;ReadPosRankSum=1.859;VQSLOD=0.3964;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:60.05:0,60,1286	0/0:7,0:7:15.01:0,15,269	0/0:59,0:6:15.04:0,15,252	0/0:55,0:7:19.58:0,20,255	0/1:23,0:22:45.56:124,0,46	0/0:14,0:14:30.07:0,30,688	0/0:4,0:4:9.03:0,9,219	0/1:28,0:28:21.28:173,0,21	0/0:13,0:12:33.01:0,33,697	0/1:20,0:19:29.21:128,0,29	1/1:20,0:19:9.51:182,10,0	1/1:5,8:12:36.04:482,36,0	1/1:4,5:9:21.04:279,21,0	1/1:11,0:11:8.25:74,8,0	0/0:14,0:16:27.09:0,27,664	0/0:12,0:12:33.10:0,33,733	0/1:20,0:18:9.80:164,0,10	1/1:28,0:23:22.74:193,23,0	0/1:21,0:14:55.59:60,0,56	0/1:18,0:18:29.72:143,0,30	0/1:9,0:8:28.64:41,0,29	1/1:7,4:11:18.69:253,19,0	1/1:1,5:7:21.07:299,21,0	1/1:5,2:6:12.04:175,12,0	1/1:21,0:20:12.53:175,13,0	1/1:20,0:20:3.01:249,3,0	1/1:16,0:15:5.06:176,5,0	0/1:22,0:16:85.27:85,0,124
chr10	48937621	.	AAAAAAAAC	A	8675.70	PASS	AB=0.821;AC=36;AF=0.643;AN=56;BaseQRankSum=9.803;DP=556;FS=1.005;HRun=0;HaplotypeScore=127.2560;InbreedingCoeff=0.8446;MQ=42.71;MQ0=47;MQRankSum=-5.695;QD=25.00;ReadPosRankSum=1.450;VQSLOD=4.6637;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:26:51.51:0,52,1653	0/0:6,0:6:18.06:0,18,407	0/0:62,0:9:23.90:0,24,401	0/0:56,0:8:23.75:0,24,318	1/1:7,20:26:38.36:602,38,0	0/0:13,0:13:32.99:0,33,905	0/0:6,0:5:12.04:0,12,334	1/1:10,20:29:62.97:998,63,0	0/0:13,0:12:32.99:0,33,851	1/1:5,13:17:30.05:556,30,0	1/1:5,16:19:33.03:661,33,0	1/1:14,0:13:24.32:257,24,0	1/1:8,0:8:20.81:177,21,0	1/1:2,9:11:15.05:288,15,0	0/0:14,0:14:30.10:0,30,905	0/0:12,0:12:33.08:0,33,865	1/1:4,16:19:24.08:567,24,0	1/1:7,19:22:27.05:589,27,0	1/1:10,13:17:26.33:421,26,0	1/1:5,16:21:30.01:543,30,0	0/1:4,5:8:36.62:134,0,37	1/1:11,0:11:17.13:148,17,0	0/1:8,0:8:4.39:161,0,4	1/1:7,0:6:11.60:94,12,0	1/1:6,23:28:27.75:615,28,0	1/1:4,15:19:45.12:936,45,0	1/1:2,17:18:24.08:572,24,0	1/1:24,2:20:15.05:354,15,0
chr10	48937629	.	CA	C	1044.56	PASS	AB=1.000;AC=34;AF=0.607;AN=56;BaseQRankSum=9.300;DP=514;FS=1.126;HRun=14;HaplotypeScore=105.2178;InbreedingCoeff=0.6379;MQ=47.50;MQ0=31;MQRankSum=-8.750;QD=3.32;ReadPosRankSum=4.977;VQSLOD=0.6484;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:39.78:0,40,470	0/0:7,0:7:12.03:0,12,128	0/0:60,0:11:16.35:0,16,160	0/0:49,2:8:17.72:0,18,111	1/1:25,0:24:12.20:32,12,0	0/0:12,0:13:23.47:0,23,216	0/0:6,0:5:11.24:0,11,102	0/1:27,0:26:12.16:12,0,34	0/0:11,0:11:26.90:0,27,248	1/1:14,0:13:12.88:38,13,0	1/1:19,0:17:14.68:43,15,0	1/1:4,11:14:29.07:208,29,0	1/1:3,6:9:20.82:151,21,0	1/1:11,0:11:6.11:19,6,0	0/0:15,0:15:30.04:0,30,294	0/0:12,0:12:20.67:0,21,184	1/1:18,0:17:16.48:50,16,0	1/1:22,0:21:15.15:46,15,0	1/1:19,0:15:5.87:17,6,0	0/1:18,0:18:2.07:25,0,2	1/1:7,0:7:1.38:8,1,0	1/1:3,8:11:22.79:157,23,0	1/1:5,7:12:31.86:226,32,0	1/1:3,3:6:11.95:92,12,0	0/1:28,0:27:11.76:20,0,12	0/1:16,0:16:3.84:37,0,4	1/1:18,0:17:16.30:49,16,0	1/1:20,0:15:0.65:14,1,0
chr10	48938543	.	C	CA	2234	PASS	AB=0.707;AC=13;AF=0.232;AN=56;BaseQRankSum=9.894;DP=589;FS=7.486;HRun=1;HaplotypeScore=94.7392;InbreedingCoeff=-0.3006;MQ=84.75;MQ0=0;MQRankSum=-10.685;QD=6.90;ReadPosRankSum=-1.298;VQSLOD=-0.0599;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:63.16:0,63,797	0/0:9,0:9:27.07:0,27,335	0/0:28,0:27:68.74:0,69,824	0/0:24,0:24:55.95:0,56,701	0/1:15,13:28:91.96:92,0,129	0/0:11,0:11:33.04:0,33,406	0/0:25,0:25:75.24:0,75,972	0/1:34,8:41:99:312,0,779	0/0:13,0:13:33.11:0,33,428	0/1:8,12:20:99:396,0,129	0/1:8,9:17:59.15:59,0,63	0/0:10,0:10:27.09:0,27,350	0/0:18,0:18:54.18:0,54,698	0/1:10,8:18:11.61:12,0,284	0/0:20,0:20:60.14:0,60,722	0/0:20,0:20:60.20:0,60,778	0/0:16,5:21:28.12:0,28,544	0/1:13,6:19:99:117,0,415	0/1:17,8:25:99:297,0,296	0/1:10,15:25:99:171,0,149	0/1:24,13:37:55.13:55,0,534	0/0:13,0:13:30.08:0,30,375	0/0:12,0:12:36.12:0,36,467	0/0:18,0:18:51.17:0,51,662	0/1:15,11:26:99:138,0,412	0/1:17,15:32:99:471,0,461	0/1:15,10:25:99:123,0,415	0/1:6,4:10:99:146,0,167
chr10	48940242	.	GA	G	2779.16	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=10.005;DP=564;FS=43.438;HRun=2;HaplotypeScore=94.3181;InbreedingCoeff=0.9983;MQ=68.49;MQ0=1;MQRankSum=-0.830;QD=31.58;ReadPosRankSum=2.127;VQSLOD=0.7666;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,144,2113	0/0:14,0:14:42.14:0,42,629	0/0:21,0:21:60.20:0,60,881	0/0:18,0:16:41.93:0,42,592	0/0:11,0:11:33.07:0,33,470	0/0:26,0:26:78.26:0,78,1169	0/0:30,0:30:87.28:0,87,1283	0/0:15,0:15:42.14:0,42,612	0/0:18,0:18:54.18:0,54,809	0/0:15,0:15:45.10:0,45,626	0/0:7,0:7:21.06:0,21,295	1/1:0,23:23:69.22:896,69,0	1/1:1,16:17:48.16:623,48,0	0/0:23,0:23:69.19:0,69,1008	0/0:38,0:38:99:0,114,1707	0/0:19,0:19:57.19:0,57,853	0/0:13,0:13:39.11:0,39,563	0/0:17,0:18:34.79:0,35,745	0/0:20,0:20:57.19:0,57,836	0/0:18,0:18:51.03:0,51,715	0/0:35,0:35:99:0,105,1547	1/1:1,8:9:24.08:307,24,0	1/1:2,11:13:33.11:428,33,0	1/1:1,25:26:54.18:701,54,0	0/0:12,0:12:36.12:0,36,540	0/0:22,0:22:63.20:0,63,924	0/0:18,0:17:54.17:0,54,788	0/0:17,0:17:51.13:0,51,739
chr10	48940727	.	CT	C	9033.24	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=14.172;DP=552;FS=0.759;HRun=9;HaplotypeScore=91.3516;InbreedingCoeff=0.9838;MQ=67.27;MQ0=1;MQRankSum=-2.952;QD=23.34;ReadPosRankSum=1.441;VQSLOD=5.3098;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:78.23:0,78,900	0/0:4,0:4:9.03:0,9,104	0/0:17,0:14:14.11:0,14,245	0/0:16,0:13:23.80:0,24,261	1/1:4,22:27:60.01:548,60,0	0/0:17,0:16:48.11:0,48,534	0/0:25,0:25:66.18:0,66,751	1/1:3,20:23:60:540,60,0	0/0:17,0:17:48.08:0,48,523	1/1:4,19:23:57.03:521,57,0	1/1:1,16:17:48.02:439,48,0	1/1:0,18:18:45.02:412,45,0	1/1:1,16:17:45.02:410,45,0	1/1:0,22:22:66.04:604,66,0	0/0:17,0:17:45.13:0,45,519	0/0:24,0:24:63.19:0,63,727	1/1:2,23:25:69.04:632,69,0	1/1:1,17:18:48.03:439,48,0	1/1:2,18:20:57.03:521,57,0	1/1:5,13:18:13.56:304,14,0	1/1:3,29:32:81.04:741,81,0	1/1:4,19:23:51:460,51,0	1/1:3,10:13:39:350,39,0	1/1:1,16:17:45.02:412,45,0	1/1:1,11:12:33.02:302,33,0	1/1:4,20:24:60.02:548,60,0	1/1:2,23:25:63.03:576,63,0	1/1:3,10:13:30.01:275,30,0
chr10	48940835	.	G	GA	3713.03	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=11.224;DP=610;FS=1.379;HRun=1;HaplotypeScore=92.1794;InbreedingCoeff=0.9939;MQ=81.32;MQ0=0;MQRankSum=-1.596;QD=37.89;ReadPosRankSum=1.329;VQSLOD=4.0828;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:93.22:0,93,1133	0/0:5,0:5:15.05:0,15,195	0/0:12,0:12:19.64:0,20,264	0/0:20,0:20:24.24:0,24,566	0/0:9,0:9:27.07:0,27,335	0/0:22,0:21:56.84:0,57,696	0/0:27,0:27:81.25:0,81,1036	0/0:24,0:24:69.19:0,69,848	0/0:20,0:20:57.19:0,57,739	0/0:29,0:29:81.26:0,81,1051	0/0:11,0:11:30.10:0,30,389	1/1:1,16:17:39.13:565,39,0	1/1:0,23:23:63.21:914,63,0	0/0:26,0:26:75.21:0,75,944	0/0:24,0:24:72.21:0,72,906	0/0:26,0:26:72.21:0,72,906	0/0:35,0:35:99:0,99,1268	0/0:21,0:21:63.19:0,63,804	0/0:21,0:21:60.11:0,60,718	0/0:15,0:15:45.13:0,45,570	0/0:46,0:46:99:0,132,1669	1/1:0,15:15:39.13:561,39,0	1/1:0,16:16:48.16:698,48,0	1/1:1,26:27:69.19:975,69,0	0/0:22,0:22:60.18:0,60,762	0/0:29,0:28:78.23:0,78,976	0/0:26,0:26:66.18:0,66,827	0/0:11,0:11:27.09:0,27,350
chr10	48941748	.	T	TC	9469.22	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=18.062;DP=602;FS=0.000;HRun=1;HaplotypeScore=217.2344;InbreedingCoeff=0.9671;MQ=68.30;MQ0=3;MQRankSum=-17.736;QD=25.66;ReadPosRankSum=3.122;VQSLOD=4.5144;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,123,1560	0/0:18,0:18:54.15:0,54,684	0/0:21,0:19:48.06:0,48,587	0/0:26,0:24:59.90:0,60,712	1/1:11,14:25:38.22:406,38,0	0/0:31,0:31:93.29:0,93,1191	0/0:28,0:28:75.24:0,75,973	1/1:17,5:22:48.06:568,48,0	0/0:15,0:15:42.13:0,42,535	1/1:17,15:31:78.15:974,78,0	1/1:8,16:24:53.18:577,53,0	1/1:8,11:19:45.06:573,45,0	1/1:10,13:23:54.01:709,54,0	1/1:10,9:18:36.10:456,36,0	0/0:29,0:29:87.27:0,87,1116	0/0:22,0:22:66.20:0,66,843	1/1:8,10:16:36.12:487,36,0	1/1:3,3:6:14.84:186,15,0	1/1:8,5:10:24.07:300,24,0	1/1:9,9:18:29.11:351,29,0	1/1:6,5:11:16.99:189,17,0	1/1:9,17:26:40.98:606,41,0	1/1:9,11:20:36.21:408,36,0	1/1:4,1:4:3.01:40,3,0	1/1:4,17:21:51.16:668,51,0	1/1:11,15:26:66.19:871,66,0	1/1:13,15:28:69.13:859,69,0	1/1:8,4:10:18.06:241,18,0
chr10	48941751	.	G	GCCCGAGAAGA	40126.02	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=13.468;DP=562;FS=2.300;HRun=0;HaplotypeScore=185.3609;InbreedingCoeff=0.9800;MQ=70.66;MQ0=2;MQRankSum=-16.730;QD=120.86;ReadPosRankSum=0.868;VQSLOD=5.5794;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,117,3848	0/0:18,0:18:54.19:0,54,1866	0/0:21,0:19:51.12:0,51,1575	0/0:26,0:24:47.04:0,47,1936	1/1:12,14:26:48.16:1856,48,0	0/0:29,0:29:87.30:0,87,3019	0/0:27,0:27:78.27:0,78,2618	1/1:25,5:30:87.30:3691,87,0	0/0:16,0:16:48.16:0,48,1549	1/1:6,15:23:69.24:3471,69,0	1/1:4,16:23:54.19:2375,54,0	1/1:1,11:13:33.11:1720,33,0	1/1:7,12:19:54.17:2557,54,0	1/1:10,9:22:60.21:2755,60,0	0/0:28,0:28:84.29:0,84,2936	0/0:22,0:22:63.22:0,63,2062	1/1:6,10:16:45.15:2061,45,0	1/1:0,3:3:9.03:419,9,0	1/1:9,5:17:48.16:2190,48,0	1/1:3,9:12:36.12:1520,36,0	1/1:4,5:9:18.06:722,18,0	1/1:3,17:22:57.20:2615,57,0	1/1:7,11:19:54.17:1945,54,0	1/1:4,1:5:9.03:475,9,0	1/1:3,17:20:60.21:2838,60,0	1/1:11,14:26:75.26:3395,75,0	1/1:3,13:18:54.19:2676,54,0	1/1:3,4:7:21.07:845,21,0
chr10	48944200	.	G	GGCA	3907.07	PASS	AB=0.647;AC=19;AF=0.339;AN=56;BaseQRankSum=-3.036;DP=355;FS=2.580;HRun=0;HaplotypeScore=72.8576;InbreedingCoeff=0.8687;MQ=91.72;MQ0=0;MQRankSum=-8.440;QD=42.93;ReadPosRankSum=0.801;VQSLOD=5.0571;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:54.18:0,54,841	0/0:8,0:8:15.05:0,15,234	0/0:16,0:17:38.95:0,39,534	0/0:24,0:24:50.72:0,51,730	1/1:5,6:11:18.06:389,18,0	0/0:17,0:17:33.11:0,33,516	0/0:18,0:18:48.16:0,48,747	1/1:7,5:12:18.06:361,18,0	0/0:16,0:16:42.14:0,42,656	0/1:5,6:11:28.89:306,0,29	1/1:2,3:5:9.03:194,9,0	0/0:14,0:14:36.11:0,36,541	0/0:11,0:11:30.10:0,30,468	1/1:3,10:13:33.11:703,33,0	0/0:14,0:14:24.08:0,24,375	0/0:14,0:14:33.11:0,33,516	1/1:3,8:11:21.07:451,21,0	1/1:2,3:5:12.04:259,12,0	0/0:17,0:17:42.14:0,42,657	0/0:8,0:8:21.07:0,21,316	0/0:12,0:12:27.09:0,27,422	0/0:10,0:10:24.08:0,24,375	0/0:9,0:9:15.05:0,15,235	0/0:13,0:13:26.96:0,27,390	1/1:0,9:9:24.08:502,24,0	1/1:3,10:13:33.11:677,33,0	0/0:15,0:14:33.11:0,33,516	1/1:0,1:1:3.01:65,3,0
chr10	48944410	.	CTCCTCT	C	683.64	PASS	AB=0.905;AC=10;AF=0.200;AN=50;BaseQRankSum=1.837;DP=331;FS=9.710;HRun=0;HaplotypeScore=52.1515;InbreedingCoeff=-0.1801;MQ=24.29;MQ0=85;MQRankSum=-3.255;QD=6.21;ReadPosRankSum=1.469;VQSLOD=0.2482;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:10:17.29:0,17,231	0/0:2,0:2:0:0,0,0	0/0:25,0:5:15.01:0,15,164	0/0:32,0:6:4.34:0,4,130	./.	0/0:20,0:15:17.19:0,17,256	0/0:9,0:4:4.20:0,4,22	./.	0/0:7,0:6:5.93:0,6,40	0/1:7,0:4:6.85:7,0,56	0/0:5,0:4:5.84:0,6,34	0/1:11,3:10:29.90:168,0,30	0/1:6,2:6:2.60:131,0,3	0/0:8,0:1:2.68:0,3,11	0/1:14,0:6:17.40:17,0,45	0/0:7,0:5:9.93:0,10,50	0/0:10,0:6:6.45:0,6,62	0/0:12,0:3:2.97:0,3,20	0/0:11,0:5:11.94:0,12,97	0/1:16,0:12:6.22:6,0,13	0/0:22,0:11:10.26:0,10,86	0/1:13,3:12:43.71:176,0,44	0/1:7,5:12:32.99:230,0,33	0/0:9,0:5:2.80:0,3,13	0/1:7,0:6:37.64:38,0,44	0/1:9,0:4:11.97:30,0,12	0/1:6,0:3:4.47:4,0,10	./.
chr10	48944414	.	TCTC	T	363.27	PASS	AB=0.934;AC=13;AF=0.271;AN=48;BaseQRankSum=2.601;DP=314;FS=13.585;HRun=0;HaplotypeScore=48.4612;InbreedingCoeff=0.0553;MQ=24.51;MQ0=76;MQRankSum=-3.903;QD=2.91;ReadPosRankSum=0.392;VQSLOD=-0.0199;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:10:14.90:0,15,226	./.	0/0:31,0:5:14.94:0,15,168	0/1:34,0:6:6:6,0,115	./.	0/0:13,0:10:18.03:0,18,298	0/0:10,0:6:9.74:0,10,72	./.	0/0:7,0:6:6.02:0,6,73	0/1:6,1:4:31.81:32,0,46	0/0:5,0:4:0.41:0,0,2	0/1:14,0:10:18.73:68,0,19	0/1:8,0:6:26.50:46,0,27	0/0:7,0:1:3.01:0,3,33	0/0:13,0:5:6.27:0,6,98	0/0:6,0:4:4.56:0,5,48	0/0:10,0:6:1.50:0,1,32	0/0:11,0:3:0.47:0,0,1	0/0:10,0:5:8.73:0,9,67	0/1:16,0:13:7.37:7,0,12	0/0:21,0:11:5.09:0,5,35	0/1:13,0:11:21.13:81,0,21	1/1:9,0:10:8.57:116,9,0	0/0:8,0:5:3:0,3,37	0/1:5,2:6:5.38:82,0,5	1/1:6,1:3:2.47:38,2,0	1/1:7,0:3:2.94:18,3,0	./.
chr10	48944417	.	CCCT	C	157.75	PASS	AB=0.930;AC=6;AF=0.136;AN=44;BaseQRankSum=0.411;DP=314;FS=9.178;HRun=0;HaplotypeScore=51.5710;InbreedingCoeff=0.0673;MQ=24.93;MQ0=68;MQRankSum=-1.089;QD=2.46;ReadPosRankSum=-0.871;VQSLOD=0.0362;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:9:15.05:0,15,281	./.	0/0:33,0:5:12.04:0,12,226	0/0:40,0:7:12.91:0,13,240	./.	0/0:12,0:10:15.05:0,15,305	0/0:10,0:6:9.10:0,9,91	./.	0/0:6,0:5:6.02:0,6,85	0/0:7,0:4:3.01:0,3,43	0/0:5,0:4:2.22:0,2,7	0/0:13,0:10:1.13:0,1,75	0/0:8,0:6:11.13:0,11,91	0/0:5,0:1:3.01:0,3,49	0/0:13,0:5:8.78:0,9,141	0/0:7,0:5:9.03:0,9,165	0/0:11,0:7:0.45:0,0,1	./.	0/1:9,2:6:47.24:75,0,47	1/1:10,6:13:4.57:48,5,0	0/1:18,3:11:8.63:119,0,9	0/0:15,0:11:11.15:0,11,67	0/1:10,0:10:3.22:3,0,14	0/0:8,0:5:1.22:0,1,44	0/1:6,0:5:13.38:17,0,13	0/0:7,0:4:2.58:0,3,24	./.	./.
chr10	48944478	.	CTTCTTT	C	241.02	PASS	AB=0.888;AC=10;AF=0.227;AN=44;BaseQRankSum=2.751;DP=241;FS=8.098;HRun=0;HaplotypeScore=57.8309;InbreedingCoeff=0.2259;MQ=43.08;MQ0=37;MQRankSum=-3.082;QD=5.13;ReadPosRankSum=-1.663;VQSLOD=0.2371;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:13:27.09:0,27,794	0/0:5,0:5:12.04:0,12,246	0/0:25,0:7:20.23:0,20,304	0/0:22,0:5:6.02:0,6,85	./.	0/0:9,0:8:14.87:0,15,233	0/0:15,0:14:32.61:0,33,563	0/0:12,0:2:6.02:0,6,133	0/0:5,0:4:3.48:0,3,77	0/1:7,2:7:95.89:96,0,124	./.	1/1:3,2:2:6.02:104,6,0	./.	./.	0/0:6,0:5:15.05:0,15,369	0/0:7,0:6:18.06:0,18,595	0/1:10,0:7:17.50:17,0,100	0/1:4,1:5:50.26:50,0,258	0/0:18,0:9:11.96:0,12,99	0/0:20,0:16:5.91:0,6,38	0/0:16,0:8:15.55:0,16,93	./.	1/1:4,1:4:2.90:16,3,0	./.	0/1:8,1:8:16.95:17,0,35	1/1:3,1:3:3.83:69,4,0	0/0:8,0:8:20.56:0,21,407	0/0:1,0:1:2.60:0,3,10
chr10	48944479	.	TTCTTTCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCTTCC	T	1156.20	PASS	AB=1.000;AC=12;AF=0.273;AN=44;BaseQRankSum=4.984;DP=243;FS=8.481;HRun=0;HaplotypeScore=156.4740;InbreedingCoeff=0.2930;MQ=43.81;MQ0=36;MQRankSum=-1.106;QD=13.14;ReadPosRankSum=0.932;VQSLOD=2.3626;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:13:27.09:0,27,1652	0/0:5,0:5:12.04:0,12,526	0/0:25,0:7:19.86:0,20,345	0/0:20,0:5:4.26:0,4,77	./.	0/0:9,0:8:12.47:0,12,306	0/0:16,0:15:33.53:0,34,1302	0/0:12,0:2:5.99:0,6,115	0/0:6,0:5:6.02:0,6,280	0/1:9,0:7:22.31:22,0,149	./.	0/0:5,0:2:1.98:0,2,81	./.	./.	0/0:8,0:7:19.31:0,19,1006	0/0:7,0:6:18.06:0,18,1230	0/0:10,0:7:14.33:0,14,156	0/1:5,0:5:39.60:40,0,459	1/1:9,8:9:1.50:467,1,0	1/1:7,13:16:8.94:113,9,0	1/1:16,0:8:3.27:75,3,0	./.	0/0:5,0:4:0.89:0,1,2	./.	0/1:9,0:8:6.20:6,0,94	0/1:4,0:3:45.46:45,0,64	1/1:8,0:8:17.64:524,18,0	0/0:1,0:1:3.01:0,3,78
chr10	48944484	.	TCTC	T	170.12	PASS	AB=0.833;AC=7;AF=0.219;AN=32;BaseQRankSum=-0.694;DP=243;FS=5.022;HRun=0;HaplotypeScore=48.9968;InbreedingCoeff=0.2778;MQ=44.19;MQ0=41;MQRankSum=2.533;QD=3.40;ReadPosRankSum=-1.797;VQSLOD=0.7957;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:14:15.05:0,15,276	0/1:4,1:5:32.02:32,0,54	./.	./.	./.	1/1:5,3:7:3.01:41,3,0	1/1:9,6:14:12.04:164,12,0	./.	0/1:4,4:6:10.97:35,0,11	0/0:8,0:6:1.60:0,2,20	./.	./.	./.	./.	0/0:10,0:8:9.50:0,10,178	0/0:11,0:10:27.09:0,27,493	0/0:11,0:8:0.47:0,0,1	0/0:6,0:5:2.98:0,3,22	0/0:17,0:8:6.02:0,6,63	./.	0/1:14,0:4:0:0,0,0	./.	./.	./.	0/0:8,0:7:2.44:0,2,6	0/0:4,0:3:5.97:0,6,45	0/0:11,0:11:28.59:0,29,274	0/0:1,0:1:2.98:0,3,21
chr10	48944515	.	CTCT	C	481.33	PASS	AB=1.000;AC=28;AF=0.560;AN=50;BaseQRankSum=6.838;DP=311;FS=7.041;HRun=0;HaplotypeScore=53.8222;InbreedingCoeff=0.3843;MQ=52.09;MQ0=27;MQRankSum=-3.238;QD=2.67;ReadPosRankSum=0.122;VQSLOD=0.1693;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:18:47.89:0,48,517	0/0:7,0:7:1.80:0,2,104	0/0:10,0:4:5.06:0,5,56	0/0:18,0:7:17.67:0,18,146	1/1:6,0:5:5.92:39,6,0	0/0:14,0:14:16.70:0,17,214	0/1:20,0:17:30.77:31,0,174	1/1:16,0:11:6.52:103,7,0	0/0:12,0:11:3.88:0,4,146	1/1:8,0:5:7.36:40,7,0	./.	1/1:4,0:1:2.50:9,2,0	1/1:5,0:4:5.92:39,6,0	1/1:12,0:9:2.97:20,3,0	0/0:11,0:10:22.36:0,22,332	0/0:23,0:21:59.99:0,60,809	1/1:8,7:13:8.64:45,9,0	1/1:14,0:11:9.84:51,10,0	0/1:13,0:7:9.13:41,0,9	1/1:15,0:13:8.85:56,9,0	1/1:19,0:13:2.96:19,3,0	./.	1/1:5,0:4:0.47:1,0,0	./.	1/1:5,1:5:7.84:38,8,0	0/1:4,0:3:13.98:15,0,14	0/1:18,0:17:54.69:98,0,55	0/0:1,0:1:0.47:0,0,1
chr10	48944518	.	TTCC	T	816.96	PASS	AB=1.000;AC=25;AF=0.500;AN=50;BaseQRankSum=8.601;DP=325;FS=28.969;HRun=0;HaplotypeScore=56.9980;InbreedingCoeff=0.5637;MQ=55.05;MQ0=23;MQRankSum=-1.910;QD=5.24;ReadPosRankSum=1.370;VQSLOD=0.6279;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:21:51.05:0,51,778	0/0:7,0:7:17.64:0,18,242	0/0:11,0:5:8.10:0,8,131	0/0:19,0:7:10.23:0,10,218	1/1:7,0:6:5.52:26,6,0	0/0:15,0:15:35.33:0,35,519	0/0:23,0:20:49.07:0,49,568	1/1:16,0:11:24.51:125,25,0	0/0:12,0:12:23.57:0,24,349	0/1:8,0:5:13.53:14,0,25	./.	0/0:5,0:2:4.04:0,4,15	1/1:5,0:4:5.54:26,6,0	1/1:12,0:9:2.80:13,3,0	0/0:12,0:11:33.01:0,33,577	0/0:26,0:24:66.20:0,66,1175	0/1:15,0:13:31.79:47,0,32	0/1:13,0:11:4.92:5,0,39	1/1:12,0:7:16.55:159,17,0	1/1:15,0:13:9.03:113,9,0	1/1:9,9:13:3.01:37,3,0	./.	1/1:4,0:4:0.47:1,0,0	./.	1/1:5,0:5:4.90:35,5,0	1/1:8,0:7:12.77:74,13,0	1/1:13,5:18:38.52:321,39,0	0/0:1,0:1:2.96:0,3,19
chr10	48944521	.	CTCCTCT	C	1559.34	PASS	AB=0.842;AC=24;AF=0.444;AN=54;BaseQRankSum=2.600;DP=341;FS=19.829;HRun=0;HaplotypeScore=69.7013;InbreedingCoeff=0.5471;MQ=57.19;MQ0=21;MQRankSum=-1.097;QD=12.68;ReadPosRankSum=-2.942;VQSLOD=-0.1731;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:22:57.18:0,57,1277	0/0:7,0:7:18.06:0,18,405	0/0:12,0:6:17.95:0,18,258	0/0:20,0:7:18.29:0,18,321	1/1:1,6:6:14.90:172,15,0	0/0:16,0:16:39.13:0,39,837	0/0:24,0:21:54.01:0,54,1106	1/1:7,10:12:9.49:492,9,0	0/0:13,0:13:27.09:0,27,674	0/1:6,3:6:24.62:124,0,25	1/1:0,7:6:8.88:58,9,0	1/1:5,0:2:6.01:64,6,0	1/1:3,2:4:6.02:114,6,0	1/1:3,9:9:3.01:57,3,0	0/0:12,0:11:33.03:0,33,847	0/0:28,0:26:72.25:0,72,1885	0/1:15,0:13:30.90:176,0,31	0/1:5,8:11:44.43:50,0,44	0/1:11,0:7:5.14:5,0,145	0/0:17,0:15:14.87:0,15,146	0/0:17,0:13:5.93:0,6,54	1/1:0,4:4:5.91:38,6,0	1/1:1,3:4:3.37:19,3,0	./.	1/1:3,3:6:10.87:105,11,0	1/1:2,6:7:18.04:274,18,0	0/0:21,0:20:53.51:0,54,696	0/0:1,0:1:2.96:0,3,19
chr10	48946019	.	GGGGGGGGGGT	G	10632.99	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=6.320;DP=334;FS=9.973;HRun=0;HaplotypeScore=118.5465;InbreedingCoeff=0.9581;MQ=72.03;MQ0=1;MQRankSum=-10.299;QD=58.75;ReadPosRankSum=9.461;VQSLOD=2.9856;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:33.11:0,33,1181	0/0:2,0:2:6.02:0,6,205	0/0:18,0:14:35.25:0,35,1007	0/0:11,0:10:23.84:0,24,550	1/1:1,11:12:30.05:850,30,0	0/0:12,0:12:30.10:0,30,1208	0/0:20,0:20:43.73:0,44,1604	1/1:4,7:11:21.03:613,21,0	0/0:11,0:11:27.09:0,27,1037	1/1:0,12:12:30.06:852,30,0	1/1:1,6:7:12.03:369,12,0	1/1:2,14:16:36.10:1104,36,0	1/1:2,5:7:15.04:461,15,0	1/1:2,13:15:33.08:1015,33,0	0/0:14,0:14:37.66:0,38,1386	0/0:10,0:10:21.07:0,21,845	1/1:4,13:17:24.04:697,24,0	1/1:2,13:15:33.10:1015,33,0	0/0:13,0:13:33.05:0,33,933	0/0:7,0:7:15.05:0,15,548	0/0:8,0:8:15.04:0,15,437	1/1:1,5:6:12.04:369,12,0	1/1:3,7:10:17.94:477,18,0	1/1:4,19:23:21.06:646,21,0	1/1:0,5:5:9.03:277,9,0	1/1:2,12:14:36.09:1036,36,0	0/0:14,0:14:20.83:0,21,660	1/1:1,10:11:30.04:851,30,0
chr10	48946020	.	G	GC	423.41	PASS	AB=0.808;AC=8;AF=0.143;AN=56;BaseQRankSum=-3.794;DP=317;FS=15.227;HRun=0;HaplotypeScore=106.4670;InbreedingCoeff=0.6590;MQ=72.11;MQ0=1;MQRankSum=2.481;QD=7.70;ReadPosRankSum=-0.761;VQSLOD=2.1903;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:29.93:0,30,250	0/0:2,0:2:1.55:0,2,4	0/0:17,0:13:32.15:0,32,276	0/0:11,0:10:15.05:0,15,142	0/0:11,0:11:26.12:0,26,141	0/0:12,0:12:29.94:0,30,263	0/0:20,0:20:42.10:0,42,353	0/0:8,0:8:15.79:0,16,91	0/0:11,0:11:26.91:0,27,259	0/0:12,0:12:24.78:0,25,130	0/0:7,0:7:14.41:0,14,75	0/0:14,0:14:34.46:0,34,181	0/0:5,0:5:14.49:0,14,78	0/0:13,0:13:31.93:0,32,172	0/0:14,0:14:34.54:0,35,271	0/1:10,0:10:12.57:13,0,76	0/0:13,0:13:20.32:0,20,110	0/0:13,0:13:31.52:0,32,166	1/1:8,4:12:15.10:206,15,0	1/1:1,6:7:11.86:145,12,0	1/1:8,2:10:13.89:109,14,0	0/0:6,0:6:11.51:0,12,60	0/0:10,0:10:14.44:0,14,78	0/0:19,0:19:20.32:0,20,110	0/0:5,0:5:8.71:0,9,47	0/0:14,0:14:33.26:0,33,172	0/1:6,10:16:6.32:96,0,6	0/0:11,0:11:26.12:0,26,141
chr10	48946028	.	GT	G	1919.91	PASS	AB=0.795;AC=40;AF=0.714;AN=56;BaseQRankSum=11.044;DP=305;FS=1.161;HRun=1;HaplotypeScore=94.1265;InbreedingCoeff=0.7747;MQ=68.76;MQ0=0;MQRankSum=-8.463;QD=8.85;ReadPosRankSum=7.316;VQSLOD=0.9044;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,1:17:35.03:0,35,303	0/0:3,0:3:8.98:0,9,73	0/0:13,0:11:23.89:0,24,212	0/1:6,1:6:5.66:6,0,50	1/1:11,0:11:27.67:130,28,0	0/0:13,0:13:32.85:0,33,312	0/0:18,0:18:27.19:0,27,366	1/1:7,0:7:16.47:74,16,0	0/1:6,4:10:7.02:7,0,89	1/1:12,0:12:27.64:139,28,0	1/1:6,0:6:10.98:49,11,0	1/1:14,0:14:32.80:145,33,0	1/1:5,0:5:13.72:61,14,0	1/1:13,0:13:30.19:135,30,0	0/0:12,0:12:11.63:0,12,262	0/0:11,0:11:6.05:0,6,101	1/1:13,0:13:22.17:105,22,0	1/1:13,0:13:30.40:140,30,0	1/1:14,0:14:35.59:246,36,0	1/1:8,0:8:18.53:114,19,0	1/1:8,0:8:17:108,17,0	1/1:6,0:6:10.98:49,11,0	1/1:9,0:9:16.56:77,17,0	1/1:19,0:19:19.27:86,19,0	1/1:5,0:5:8.23:37,8,0	1/1:13,0:13:5.83:112,6,0	1/1:14,0:14:27.25:167,27,0	1/1:10,0:10:27.67:131,28,0
chr10	48946197	.	TA	T	5565.32	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=10.409;DP=419;FS=14.031;HRun=10;HaplotypeScore=69.4179;InbreedingCoeff=0.9739;MQ=68.03;MQ0=1;MQRankSum=-3.807;QD=20.39;ReadPosRankSum=0.055;VQSLOD=4.4477;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,114,1209	0/0:4,0:4:12.03:0,12,133	0/0:14,0:12:8.97:0,9,81	0/0:13,0:8:15.01:0,15,153	1/1:6,15:21:26.96:388,27,0	0/0:10,0:10:30.08:0,30,332	0/0:25,0:25:69.17:0,69,753	1/1:1,22:23:62.93:534,63,0	0/0:10,0:11:32.91:0,33,337	1/1:4,9:13:23.99:208,24,0	1/1:3,7:10:23.92:195,24,0	1/1:2,7:9:14.94:123,15,0	1/1:0,12:12:35.96:306,36,0	1/1:2,9:11:29.83:237,30,0	0/0:12,1:13:12.98:0,13,346	0/0:15,0:15:42.10:0,42,457	1/1:4,16:20:38.98:338,39,0	1/1:3,13:16:43.81:369,44,0	1/1:4,16:20:47.94:411,48,0	1/1:2,8:10:23.98:208,24,0	1/1:0,15:15:44.99:391,45,0	1/1:1,6:7:17.99:155,18,0	1/1:1,11:12:32.99:286,33,0	1/1:1,19:19:38.79:325,39,0	1/1:2,16:18:38.94:331,39,0	1/1:0,10:10:29.94:252,30,0	1/1:4,9:13:29.93:253,30,0	1/1:3,10:13:29.94:254,30,0
chr10	48946220	.	A	ACG	2916.16	PASS	AB=1.000;AC=31;AF=0.554;AN=56;BaseQRankSum=9.753;DP=483;FS=7.375;HRun=0;HaplotypeScore=151.9788;InbreedingCoeff=0.8734;MQ=54.22;MQ0=4;MQRankSum=-5.489;QD=10.64;ReadPosRankSum=1.036;VQSLOD=2.5839;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:35:89.95:0,90,1051	0/0:7,0:7:21.02:0,21,260	0/0:13,0:8:23.61:0,24,177	0/0:13,0:5:14.89:0,15,123	1/1:22,1:22:29.20:229,29,0	0/0:9,0:10:29.96:0,30,337	0/0:34,0:34:96.15:0,96,1279	1/1:29,0:28:55.78:544,56,0	0/0:19,0:19:54.13:0,54,786	1/1:16,0:14:33.37:216,33,0	1/1:15,0:15:17.93:163,18,0	1/1:13,1:14:8.88:89,9,0	1/1:16,0:17:25.49:194,25,0	1/1:13,1:14:18:191,18,0	0/0:15,0:15:42.10:0,42,608	0/0:20,0:21:62.04:0,62,699	1/1:25,0:24:48.04:348,48,0	1/1:18,0:18:39.51:357,40,0	0/0:17,0:16:12.04:0,12,320	0/0:6,0:6:12:0,12,123	0/0:19,0:19:29.99:0,30,343	1/1:6,0:6:5.87:39,6,0	1/1:12,0:12:11.83:80,12,0	1/1:18,0:18:8.84:66,9,0	1/1:17,0:17:11.96:120,12,0	1/1:18,0:18:38.55:208,39,0	0/1:21,0:21:33.44:33,0,243	1/1:10,1:11:29.72:263,30,0
chr10	48946255	.	C	CGCGT	657	PASS	AB=0.885;AC=10;AF=0.185;AN=54;BaseQRankSum=5.977;DP=413;FS=0.672;HRun=0;HaplotypeScore=110.7187;InbreedingCoeff=0.5037;MQ=58.60;MQ0=8;MQRankSum=0.191;QD=6.44;ReadPosRankSum=2.664;VQSLOD=2.3967;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:90.25:0,90,1645	0/0:4,0:4:12.03:0,12,197	0/0:17,0:6:12.83:0,13,135	0/0:19,0:5:9.28:0,9,59	0/0:9,0:9:9.03:0,9,130	0/0:13,0:13:33.10:0,33,599	0/0:31,0:31:81.22:0,81,1436	0/0:9,0:7:6.02:0,6,81	0/0:16,0:16:45.14:0,45,811	0/0:10,0:8:23.68:0,24,258	0/0:12,0:12:11.87:0,12,133	1/1:8,4:13:8.95:99,9,0	1/1:6,3:9:21.06:396,21,0	0/0:12,0:12:14.56:0,15,235	0/0:22,0:22:60.06:0,60,935	0/0:19,0:19:54.16:0,54,958	0/0:21,0:21:29.91:0,30,402	0/0:18,0:18:29.72:0,30,481	0/1:14,0:14:30.03:30,0,62	0/0:11,0:11:8.81:0,9,75	0/1:15,0:15:11.13:11,0,100	./.	1/1:8,3:11:14.93:229,15,0	0/1:3,12:20:0.04:0,0,0	0/0:11,0:11:17.65:0,18,222	0/0:18,0:18:51.10:0,51,642	0/1:20,0:20:39.54:40,0,124	0/0:6,0:6:15.92:0,16,202
chr10	48946480	.	CT	C	4806.93	PASS	AC=38;AF=0.704;AN=54;BaseQRankSum=8.771;DP=439;FS=5.124;HRun=11;HaplotypeScore=53.7050;InbreedingCoeff=0.9251;MQ=66.27;MQ0=0;MQRankSum=-0.652;QD=14.70;ReadPosRankSum=1.172;VQSLOD=5.2649;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,1:24:35.47:0,35,571	0/0:3,0:3:9.02:0,9,96	./.	0/0:10,0:8:11.96:0,12,108	1/1:6,14:21:6.03:245,6,0	0/0:17,0:17:48.12:0,48,512	0/0:7,0:7:18.05:0,18,192	1/1:8,16:25:46.06:388,46,0	0/0:12,0:12:24.06:0,24,255	1/1:4,15:19:41.93:345,42,0	1/1:5,16:21:35.88:295,36,0	1/1:2,0:30:52.96:153,53,0	1/1:4,0:19:28.51:82,29,0	1/1:5,15:20:41.93:344,42,0	0/0:21,0:21:54.11:0,54,555	0/0:14,0:14:33.08:0,33,352	1/1:2,19:22:53.20:445,53,0	1/1:1,4:5:8.99:74,9,0	1/1:4,8:13:26:202,26,0	1/1:1,24:26:67.94:548,68,0	1/1:3,4:7:11.13:97,11,0	1/1:2,0:6:8.14:24,8,0	1/1:4,0:14:12.04:34,12,0	1/1:1,0:6:10.18:29,10,0	1/1:1,18:20:52.97:425,53,0	1/1:5,17:23:54.96:426,55,0	1/1:2,11:13:35.69:282,36,0	1/1:1,15:16:44.93:369,45,0
chr10	48947384	.	TA	T	7659.41	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=6.682;DP=615;FS=10.904;HRun=9;HaplotypeScore=63.5556;InbreedingCoeff=0.9996;MQ=75.79;MQ0=0;MQRankSum=-1.416;QD=23.35;ReadPosRankSum=3.990;VQSLOD=5.2064;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:51.11:0,51,565	0/0:10,0:10:27.07:0,27,302	0/0:19,0:19:45.08:0,45,480	0/0:12,0:12:30.03:0,30,318	1/1:6,23:29:63.01:577,63,0	0/0:21,0:21:60.60:0,61,669	0/0:14,0:14:42.11:0,42,475	1/1:5,19:24:54.01:488,54,0	0/0:19,1:20:29.60:0,30,558	1/1:2,21:23:63.03:577,63,0	1/1:3,17:20:48.02:439,48,0	1/1:2,21:24:62.06:555,62,0	1/1:2,12:14:33.01:302,33,0	1/1:0,20:20:57.03:521,57,0	0/0:24,0:24:57.17:0,57,658	0/0:31,0:31:87.08:0,87,947	1/1:2,25:27:63.03:576,63,0	1/1:2,15:17:36.02:329,36,0	0/0:20,0:20:45.13:0,45,519	0/0:46,0:48:99:0,123,1384	0/0:14,0:14:33.09:0,33,371	1/1:2,17:19:51.02:467,51,0	1/1:3,25:28:75.04:686,75,0	1/1:1,22:23:66.04:604,66,0	1/1:0,23:23:69.04:632,69,0	1/1:3,23:26:66.03:604,66,0	0/0:35,1:36:71.77:0,72,1052	1/1:0,11:11:33.02:302,33,0
chr10	48947837	.	T	TTTTGAGAACATATA	66372.80	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-0.163;DP=692;FS=0.621;HRun=0;HaplotypeScore=250.6841;InbreedingCoeff=0.9972;MQ=67.93;MQ0=0;MQRankSum=-19.128;QD=148.15;ReadPosRankSum=-1.746;VQSLOD=4.0689;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:90.23:0,90,3432	0/0:15,0:15:39.12:0,39,1370	0/0:20,0:20:45.46:0,45,1494	0/0:13,0:13:28.54:0,29,767	1/1:9,10:23:54.18:3076,54,0	0/0:49,0:49:99:0,141,5556	0/0:18,0:18:51.18:0,51,2028	1/1:36,6:47:99:6829,126,0	0/0:29,0:29:84.29:0,84,3413	1/1:16,10:28:78.27:4724,78,0	1/1:10,8:23:51.17:2818,51,0	1/1:13,13:27:75.26:4537,75,0	1/1:4,11:15:45.15:3015,45,0	1/1:16,9:25:66.22:3724,66,0	0/0:29,0:29:84.27:0,84,3229	0/0:41,0:41:99:0,114,4472	1/1:11,6:18:36.09:2003,36,0	1/1:9,4:14:30.10:1806,30,0	1/1:12,5:20:51.14:2537,51,0	1/1:15,11:28:75.25:4112,75,0	1/1:8,1:11:15.05:891,15,0	1/1:11,6:19:45.15:2594,45,0	1/1:12,13:26:66.23:4244,66,0	1/1:11,6:17:33.11:1875,33,0	1/1:11,7:20:48.16:2762,48,0	1/1:18,14:34:99:5634,99,0	1/1:19,21:41:99:7122,114,0	1/1:4,7:11:33.11:2069,33,0
chr10	48948285	.	A	AG	22485.20	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-17.548;DP=850;FS=3.772;HRun=1;HaplotypeScore=76.7841;InbreedingCoeff=0.9998;MQ=84.64;MQ0=0;MQRankSum=-3.315;QD=40.81;ReadPosRankSum=2.658;VQSLOD=5.5937;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:61,0:61:99:0,184,2343	0/0:12,0:12:36.12:0,36,466	0/0:32,0:32:93.19:0,93,1131	0/0:18,0:18:51.15:0,51,646	1/1:0,48:48:99:2011,138,0	0/0:20,0:20:54.18:0,54,701	0/0:33,0:33:99:0,99,1257	1/1:3,29:32:84.25:1216,84,0	0/0:34,0:34:99:0,99,1286	1/1:4,22:26:69.22:1013,69,0	1/1:0,23:23:66.22:989,66,0	1/1:0,42:42:99:1708,114,0	1/1:0,23:23:60.20:898,60,0	1/1:1,34:36:99:1525,102,0	0/0:47,0:47:99:0,138,1777	0/0:42,0:42:99:0,126,1590	1/1:0,29:29:84.28:1259,84,0	1/1:1,19:20:54.18:809,54,0	1/1:0,18:18:48.14:694,48,0	1/1:1,25:26:75.21:1098,75,0	1/1:0,46:46:99:2020,135,0	1/1:0,23:23:63.21:943,63,0	1/1:0,28:28:69.19:1008,69,0	1/1:0,28:28:78.26:1169,78,0	1/1:2,23:25:66.22:989,66,0	1/1:1,28:29:84.28:1246,84,0	1/1:1,37:38:99:1483,99,0	1/1:0,11:11:27.09:405,27,0
chr10	48949538	.	GT	G	15114.84	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=14.764;DP=731;FS=1.195;HRun=1;HaplotypeScore=75.1706;InbreedingCoeff=0.9978;MQ=77.48;MQ0=0;MQRankSum=-3.161;QD=38.66;ReadPosRankSum=1.744;VQSLOD=5.5562;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,126,1956	0/0:5,0:5:15.05:0,15,240	0/0:23,0:23:69.14:0,69,973	0/0:24,0:23:66.19:0,66,988	1/1:0,27:27:74.90:1016,75,0	0/0:19,0:19:57.19:0,57,898	0/0:26,0:26:78.22:0,78,1171	1/1:0,27:27:81.27:1120,81,0	0/0:27,0:27:81.26:0,81,1268	1/1:0,18:18:54.18:750,54,0	1/1:0,20:20:60.20:833,60,0	1/1:0,19:19:57.19:789,57,0	1/1:1,28:29:77.88:1080,78,0	1/1:0,18:18:48.16:671,48,0	0/0:42,0:42:99:0,126,1964	0/0:24,0:24:72.23:0,72,1123	1/1:0,41:41:99:1467,105,0	1/1:0,32:32:84.28:1172,84,0	0/0:21,0:21:60.20:0,60,959	0/0:18,0:18:54.16:0,54,815	0/0:51,0:51:99:0,150,2332	1/1:0,31:31:78.26:1090,78,0	1/1:0,15:15:42.14:587,42,0	1/1:1,44:45:84.52:1716,85,0	1/1:0,25:25:75.25:1038,75,0	1/1:0,28:28:84.27:1159,84,0	0/0:18,0:18:54.18:0,54,850	1/1:0,16:16:45.15:627,45,0
chr10	48950165	.	CCTAATGG	C	16057.34	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=14.846;DP=621;FS=0.000;HRun=0;HaplotypeScore=166.2118;InbreedingCoeff=0.9966;MQ=69.46;MQ0=0;MQRankSum=-18.077;QD=55.75;ReadPosRankSum=5.228;VQSLOD=4.7714;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,144,5390	0/0:11,0:11:33.11:0,33,1301	0/0:19,0:19:43.97:0,44,1354	0/0:17,0:17:42.14:0,42,1461	1/1:0,20:20:36.06:676,36,0	0/0:21,0:21:63.22:0,63,2327	0/0:25,0:25:69.21:0,69,2407	1/1:5,27:29:72.22:1765,72,0	0/0:28,0:28:78.27:0,78,3000	1/1:1,13:14:36.12:887,36,0	1/1:1,9:10:21.03:494,21,0	1/1:0,24:24:66.23:1724,66,0	1/1:1,22:23:60.21:1580,60,0	1/1:0,19:19:48.16:1243,48,0	0/0:33,0:33:99:0,99,3880	0/0:37,0:37:99:0,111,4308	1/1:1,25:26:57.19:1445,57,0	1/1:4,16:20:39.13:1006,39,0	0/0:16,0:16:45.13:0,45,1613	0/0:24,0:24:69.24:0,69,2358	0/0:32,0:32:96.33:0,96,3674	1/1:2,7:9:21.07:503,21,0	1/1:0,17:17:48.15:957,48,0	1/1:4,22:26:35.61:899,36,0	1/1:1,18:19:42.14:1019,42,0	1/1:4,20:24:60.15:1464,60,0	0/0:21,0:21:60.21:0,60,2310	1/1:0,5:5:15.05:395,15,0
chr10	48954616	.	G	GA	11550.65	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-4.013;DP=659;FS=0.317;HRun=7;HaplotypeScore=71.7564;InbreedingCoeff=0.9714;MQ=77.37;MQ0=0;MQRankSum=-1.131;QD=29.77;ReadPosRankSum=1.144;VQSLOD=5.2317;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:51.08:0,51,492	0/0:7,0:7:18.03:0,18,174	0/0:19,0:19:29.49:0,29,300	0/0:16,0:15:2.13:0,2,126	1/1:2,39:41:99:1361,114,0	0/0:18,0:18:51.08:0,51,492	0/0:15,0:15:45.06:0,45,429	1/1:6,29:35:87.24:1027,87,0	0/0:21,0:22:59.10:0,59,547	1/1:2,38:40:99:1365,114,0	1/1:2,21:23:51.11:600,51,0	1/1:4,21:25:66.20:797,66,0	1/1:1,24:25:69.20:834,69,0	1/1:0,26:26:75.23:906,75,0	0/0:29,0:29:75.09:0,75,715	0/0:28,0:28:84.14:0,84,811	1/1:8,18:26:45.14:544,45,0	1/1:2,19:21:51.16:615,51,0	0/0:19,0:19:51.06:0,51,482	0/0:26,0:26:75.10:0,75,713	0/0:20,0:20:57.09:0,57,550	1/1:2,12:14:33.10:399,33,0	1/1:6,23:29:60.18:725,60,0	1/1:6,16:22:45.14:544,45,0	1/1:2,18:20:45.14:544,45,0	1/1:1,26:27:75.21:893,75,0	0/0:34,0:34:90.14:0,90,869	1/1:1,13:14:33.10:399,33,0
chr10	48955020	.	TTG	T	2046.48	PASS	AB=1.000;AC=27;AF=0.482;AN=56;BaseQRankSum=4.339;DP=457;FS=26.920;HRun=0;HaplotypeScore=132.1980;InbreedingCoeff=0.7904;MQ=76.79;MQ0=3;MQRankSum=-2.169;QD=8.19;ReadPosRankSum=-1.686;VQSLOD=1.4980;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:30:76.86:0,77,1038	0/0:10,0:10:25.28:0,25,298	0/0:8,0:7:1.29:0,1,56	0/0:17,0:16:13.82:0,14,119	1/1:31,0:31:42.97:294,43,0	0/0:16,0:16:41.92:0,42,515	0/0:10,0:10:27.51:0,28,322	1/1:4,16:20:28.11:281,28,0	0/0:10,0:10:16.06:0,16,322	1/1:17,0:17:14.76:125,15,0	1/1:21,0:21:15.29:126,15,0	1/1:5,0:5:7.89:75,8,0	0/1:9,0:9:1.73:125,0,2	1/1:12,0:12:9.75:114,10,0	0/0:12,0:12:29.50:0,29,324	0/0:12,0:12:32.59:0,33,278	1/1:24,0:24:22.18:143,22,0	1/1:26,0:25:31.65:208,32,0	0/0:19,0:19:41.15:0,41,319	0/0:23,0:23:29.96:0,30,197	0/0:17,0:16:23.65:0,24,148	0/1:9,0:9:2.82:99,0,3	0/1:9,0:9:0.66:89,0,1	1/1:9,0:9:7.73:43,8,0	1/1:29,0:29:35.93:272,36,0	1/1:15,0:15:22.30:169,22,0	0/0:22,0:22:9.21:0,9,82	1/1:14,0:14:10.81:94,11,0
chr10	48955038	.	GCGCGCACACA	G	3860.55	PASS	AB=1.000;AC=17;AF=0.315;AN=54;BaseQRankSum=7.045;DP=473;FS=2.310;HRun=0;HaplotypeScore=189.6698;InbreedingCoeff=0.1618;MQ=51.07;MQ0=10;MQRankSum=-6.378;QD=13.74;ReadPosRankSum=1.498;VQSLOD=2.8007;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:40:99:0,106,3341	0/0:11,0:11:27.09:0,27,1120	0/0:2,0:1:3.01:0,3,36	./.	0/1:28,0:28:99:380,0,169	0/0:15,0:15:37.66:0,38,1167	0/0:14,0:12:21.52:0,22,359	0/0:16,0:15:11.33:0,11,123	0/0:16,0:16:42.12:0,42,1323	0/1:17,0:17:86.81:87,0,252	0/1:27,0:26:68.07:68,0,358	0/0:11,0:11:8.14:0,8,148	0/0:3,0:3:6.02:0,6,100	0/1:13,0:13:99:150,0,148	0/0:18,0:18:30.10:0,30,1033	0/0:9,0:9:18.02:0,18,441	0/1:26,0:26:99:192,0,252	0/1:28,0:27:49.97:50,0,522	1/1:6,11:16:32.92:610,33,0	1/1:3,17:21:27.09:817,27,0	1/1:18,0:16:18.06:287,18,0	0/0:10,0:8:8.92:0,9,213	0/0:10,0:10:12.49:0,12,204	0/0:11,0:10:8.96:0,9,174	0/1:25,0:25:99:140,0,267	0/1:19,0:19:99:284,0,175	1/1:8,20:28:22.97:723,23,0	0/1:14,0:14:74.45:74,0,327
chr10	48955042	.	GCACACACACACA	G	4500.23	PASS	AB=0.920;AC=21;AF=0.404;AN=52;BaseQRankSum=10.344;DP=486;FS=7.082;HRun=0;HaplotypeScore=204.4481;InbreedingCoeff=0.5806;MQ=48.66;MQ0=12;MQRankSum=-8.804;QD=17.31;ReadPosRankSum=2.128;VQSLOD=2.8204;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:37:81.28:0,81,4069	0/0:10,0:10:27.09:0,27,1379	./.	./.	1/1:11,11:25:6.63:760,7,0	0/0:15,0:15:27.09:0,27,1381	0/0:12,0:10:6.02:0,6,324	0/0:15,0:14:5.93:0,6,89	0/0:17,0:17:36.12:0,36,1868	1/1:10,1:19:12.03:324,12,0	1/1:16,3:27:8.87:311,9,0	0/0:14,0:13:5.14:0,5,308	0/0:6,0:6:3.01:0,3,149	1/1:2,7:11:12.04:415,12,0	0/0:21,0:21:30.10:0,30,1636	0/0:8,0:11:12.04:0,12,550	1/1:16,5:25:13.95:453,14,0	0/1:20,5:26:63.92:302,0,64	0/1:18,0:17:21.49:21,0,197	1/1:21,0:22:23.59:211,24,0	0/0:19,0:17:9.13:0,9,31	0/0:15,0:13:5.99:0,6,190	0/0:10,0:10:3.48:0,3,166	0/0:14,0:13:9.03:0,9,368	1/1:17,6:24:15.51:439,16,0	1/1:9,9:20:29.84:829,30,0	0/1:27,0:28:17.61:129,0,18	1/1:9,2:12:9.03:305,9,0
chr10	48955515	.	CA	C	3132.77	PASS	AB=0.743;AC=30;AF=0.536;AN=56;BaseQRankSum=8.171;DP=613;FS=5.110;HRun=14;HaplotypeScore=77.1724;InbreedingCoeff=0.5926;MQ=74.27;MQ0=3;MQRankSum=0.352;QD=8.03;ReadPosRankSum=2.798;VQSLOD=3.0664;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,4:34:22.75:0,23,476	0/0:7,0:7:11.80:0,12,93	0/1:21,1:19:12.13:24,0,12	0/0:33,0:17:11.20:0,11,73	1/1:7,25:34:53.37:438,53,0	0/1:8,3:11:34.72:35,0,140	0/0:16,0:15:26.99:0,27,240	1/1:6,9:16:28.70:188,29,0	0/0:16,1:19:7.81:0,8,267	1/1:8,21:29:58.25:395,58,0	1/1:7,19:29:59.58:387,60,0	0/0:21,0:23:50.14:0,50,474	0/0:23,0:23:40.23:0,40,352	1/1:7,11:18:23.59:164,24,0	0/0:19,0:20:38.09:0,38,376	0/0:22,0:22:54.04:0,54,493	1/1:8,23:31:42.62:374,43,0	0/1:4,15:20:11.97:209,0,12	1/1:6,0:14:20.12:58,20,0	1/1:3,1:36:57.46:178,57,0	1/1:5,0:10:6.10:18,6,0	0/0:24,2:26:36.43:0,36,464	0/1:16,5:22:61.83:62,0,223	0/1:16,2:20:3.32:3,0,270	1/1:2,14:17:40.71:273,41,0	1/1:4,15:23:49.74:311,50,0	1/1:2,0:22:34.62:100,35,0	0/1:4,7:12:2.01:124,0,2
chr10	48956533	.	AG	A	2700.86	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-2.379;DP=634;FS=4.931;HRun=2;HaplotypeScore=118.7342;InbreedingCoeff=0.9994;MQ=84.21;MQ0=0;MQRankSum=-0.740;QD=34.19;ReadPosRankSum=1.052;VQSLOD=3.1481;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,160,2355	0/0:9,0:9:27.08:0,27,387	0/0:18,0:18:54.12:0,54,712	0/0:20,0:20:57.05:0,57,706	0/0:24,0:24:72.23:0,72,1056	0/0:15,0:15:45.14:0,45,654	0/0:25,0:25:75.22:0,75,1075	0/0:30,0:30:90.30:0,90,1348	0/0:25,0:25:72.24:0,72,1077	0/0:37,0:37:99:0,102,1434	0/0:20,0:20:60.19:0,60,880	0/0:25,0:25:75.25:0,75,1121	0/0:27,0:27:78.26:0,78,1149	0/0:26,0:26:78.26:0,78,1161	0/0:21,0:20:60.20:0,60,899	0/0:21,0:21:63.21:0,63,943	0/0:19,0:19:57.19:0,57,851	0/0:19,0:19:57.19:0,57,854	1/1:1,18:19:54.18:701,54,0	1/1:0,14:14:39.09:488,39,0	1/1:0,19:19:54.18:701,54,0	0/0:16,0:16:48.15:0,48,698	0/0:22,0:22:66.21:0,66,970	0/0:23,0:23:69.23:0,69,1033	0/0:28,0:28:84.28:0,84,1257	0/0:21,0:21:57.17:0,57,815	1/1:0,27:27:75.24:971,75,0	0/0:9,0:9:27.08:0,27,385
chr10	48957431	.	TACTC	T	15480.32	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=15.001;DP=536;FS=6.589;HRun=0;HaplotypeScore=145.8240;InbreedingCoeff=0.9986;MQ=69.47;MQ0=0;MQRankSum=-15.657;QD=52.48;ReadPosRankSum=1.847;VQSLOD=5.8757;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,102,2804	0/0:6,0:6:18.06:0,18,505	0/0:22,0:22:66.22:0,66,1765	0/0:20,0:19:44.88:0,45,1329	1/1:0,25:25:63.14:1196,63,0	0/0:15,0:15:45.15:0,45,1283	0/0:17,0:17:51.18:0,51,1423	1/1:0,17:17:51.16:1001,51,0	0/0:17,0:17:51.16:0,51,1414	1/1:0,25:25:69.23:1388,69,0	1/1:0,21:21:63.13:1186,63,0	1/1:0,17:17:48.16:973,48,0	1/1:0,18:18:48.16:1001,48,0	1/1:0,16:16:42.14:878,42,0	0/0:21,0:21:63.22:0,63,1812	0/0:13,0:13:39.11:0,39,1005	1/1:0,26:26:60.21:1241,60,0	1/1:0,18:18:30.10:613,30,0	0/0:19,0:19:54.18:0,54,1460	0/0:18,0:18:54.16:0,54,1428	0/0:17,0:17:48.16:0,48,1389	1/1:0,26:26:75.17:1447,75,0	1/1:0,13:13:36.04:660,36,0	1/1:0,16:16:30.10:619,30,0	1/1:0,21:21:57.11:1097,57,0	1/1:0,27:27:81.26:1616,81,0	0/0:22,0:22:66.23:0,66,1792	1/1:0,9:9:27.09:565,27,0
chr10	48958464	.	AGTAG	A	5948.53	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=12.659;DP=671;FS=6.545;HRun=0;HaplotypeScore=111.5045;InbreedingCoeff=0.9999;MQ=87.44;MQ0=0;MQRankSum=-5.147;QD=52.18;ReadPosRankSum=3.774;VQSLOD=6.0766;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,123,3443	0/0:12,0:12:36.12:0,36,1041	0/0:21,0:21:61.94:0,62,1399	0/0:27,0:27:72.21:0,72,1735	0/0:28,0:28:81.28:0,81,2340	0/0:22,0:22:66.21:0,66,1834	0/0:19,0:19:57.20:0,57,1608	0/0:35,0:35:99:0,99,2621	0/0:26,0:26:78.27:0,78,2219	0/0:37,0:37:99:0,111,3170	0/0:24,0:24:69.23:0,69,1924	1/1:0,24:24:63.22:1320,63,0	1/1:0,26:25:63.22:1320,63,0	0/0:17,0:17:51.18:0,51,1449	0/0:29,0:29:87.30:0,87,2464	0/0:26,0:26:78.27:0,78,2140	0/0:15,0:15:45.15:0,45,1304	0/0:13,0:13:39.13:0,39,1071	0/0:18,0:18:54.19:0,54,1460	0/0:29,0:29:87.30:0,87,2476	0/0:22,0:22:66.21:0,66,1808	1/1:0,15:15:39.13:817,39,0	1/1:0,22:22:60.21:1255,60,0	1/1:7,20:27:60.21:1235,60,0	0/0:23,0:23:69.24:0,69,1908	0/0:24,0:24:72.25:0,72,1978	0/0:23,0:23:69.24:0,69,1998	0/0:24,0:24:72.25:0,72,2056
chr10	48958834	.	GA	G	2064.71	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=-0.531;DP=489;FS=0.548;HRun=32;HaplotypeScore=53.4743;InbreedingCoeff=0.8928;MQ=46.62;MQ0=63;MQRankSum=0.396;QD=9.39;ReadPosRankSum=1.244;VQSLOD=1.8833;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:28:43.58:0,44,419	0/0:10,0:9:12.48:0,12,124	0/1:26,0:11:6.31:6,0,66	0/0:34,0:7:15.07:0,15,118	1/1:13,3:16:19.58:178,20,0	0/0:17,0:17:21.51:0,22,223	0/0:16,0:14:12.03:0,12,129	1/1:9,14:21:19.51:260,20,0	0/0:8,0:7:8.81:0,9,80	1/1:20,3:22:38.53:324,39,0	1/1:16,2:15:32.95:284,33,0	0/0:9,0:8:17.84:0,18,172	0/0:14,0:12:16.43:0,16,148	1/1:14,4:14:23.78:205,24,0	0/0:6,0:6:12.01:0,12,123	0/0:17,0:17:34.17:0,34,348	1/1:20,3:20:29.34:249,29,0	1/1:16,1:15:29.91:259,30,0	0/0:25,0:13:27.32:0,27,260	0/0:16,0:15:23.21:0,23,216	0/0:12,0:10:15.51:0,16,164	0/0:6,0:6:15.02:0,15,153	0/0:12,0:10:24.01:0,24,246	0/0:7,0:5:9.49:0,9,95	1/1:18,2:16:29.64:257,30,0	1/1:18,2:16:20.80:131,21,0	0/0:27,0:22:27.06:0,27,289	1/1:15,1:7:14.98:129,15,0
chr10	48958882	.	GCAAACAAA	G	10085.49	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=7.183;DP=462;FS=5.088;HRun=0;HaplotypeScore=135.5166;InbreedingCoeff=0.9202;MQ=67.45;MQ0=2;MQRankSum=-12.686;QD=43.47;ReadPosRankSum=0.568;VQSLOD=4.4649;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:78.23:0,78,2941	0/0:4,0:4:12.04:0,12,497	0/0:20,0:19:3.48:0,3,108	0/0:16,0:14:19.88:0,20,610	1/1:3,19:22:39.13:959,39,0	0/0:22,0:22:57.20:0,57,2283	0/0:17,0:17:42.13:0,42,1516	1/1:25,1:25:8.94:116,9,0	0/0:14,0:14:42.14:0,42,1730	1/1:6,13:19:39.13:934,39,0	1/1:9,10:19:33.11:837,33,0	1/1:3,8:11:24.08:608,24,0	1/1:1,18:18:48.16:1196,48,0	1/1:3,13:15:36.12:912,36,0	0/0:17,0:17:45.15:0,45,1855	0/0:20,0:20:57.20:0,57,2267	1/1:3,4:7:6.02:122,6,0	1/1:7,4:9:6.02:152,6,0	0/0:7,0:9:12.04:0,12,348	0/0:3,0:19:51.18:0,51,1656	0/0:4,0:13:24.01:0,24,777	1/1:3,9:12:27.09:635,27,0	1/1:3,11:14:33.11:837,33,0	1/1:4,6:10:8.07:227,8,0	1/1:6,13:19:33.11:810,33,0	1/1:3,18:21:51.18:1288,51,0	0/0:8,0:30:66.22:0,66,2242	1/1:0,6:6:18.06:453,18,0
chr10	48960026	.	G	GT	7492.61	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=9.215;DP=676;FS=1.360;HRun=7;HaplotypeScore=100.3827;InbreedingCoeff=0.7975;MQ=81.89;MQ0=6;MQRankSum=-1.275;QD=23.71;ReadPosRankSum=-0.841;VQSLOD=4.2399;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:83.98:0,84,769	0/0:5,0:5:15.02:0,15,145	0/0:50,0:40:45.34:0,45,548	0/0:32,1:23:10.17:0,10,221	1/1:5,21:27:66.72:815,67,0	0/0:32,0:32:84.08:0,84,796	0/0:26,0:26:66.02:0,66,611	1/1:4,37:40:99:1173,109,0	0/0:17,0:17:42.04:0,42,400	1/1:2,31:33:93.17:1044,93,0	1/1:3,25:28:72.40:812,72,0	0/1:13,0:13:27.05:27,0,29	0/0:11,0:11:20.67:0,21,78	1/1:1,11:12:27.08:323,27,0	0/0:17,0:17:42.04:0,42,396	0/0:17,0:17:51.07:0,51,484	1/1:3,18:21:45.14:538,45,0	1/1:4,18:23:53.08:632,53,0	0/0:25,0:25:62.65:0,63,585	0/0:31,0:31:78.04:0,78,724	0/0:26,0:26:65.54:0,66,712	0/1:25,0:25:1.39:1,0,86	0/1:27,0:27:25.26:25,0,102	0/0:13,0:13:14.77:0,15,46	1/1:2,25:27:75.19:880,75,0	1/1:4,22:26:66.58:793,67,0	0/0:21,0:21:60.09:0,60,575	1/1:0,13:13:36.11:430,36,0
chr10	48960409	.	CTTGTGACTACG	C	25866.52	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=19.463;DP=747;FS=4.873;HRun=0;HaplotypeScore=261.0069;InbreedingCoeff=0.9961;MQ=79.37;MQ0=0;MQRankSum=-18.596;QD=71.45;ReadPosRankSum=2.271;VQSLOD=4.4920;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,99,5004	0/0:13,0:13:30.10:0,30,1645	0/0:22,0:22:51.16:0,51,2258	0/0:24,0:24:29.85:0,30,2534	1/1:8,37:45:99:3239,108,0	0/0:25,0:25:72.25:0,72,3818	0/0:27,0:27:63.22:0,63,3144	1/1:12,19:31:57.17:1528,57,0	0/0:26,0:26:69.24:0,69,3492	1/1:8,21:29:72.25:2371,72,0	1/1:0,10:10:24.01:737,24,0	1/1:5,25:30:78.27:2672,78,0	1/1:4,20:24:36.12:1233,36,0	1/1:1,23:24:57.20:1952,57,0	0/0:37,0:37:99:0,102,5304	0/0:32,0:32:90.31:0,90,5039	1/1:6,14:20:30.10:1025,30,0	1/1:6,13:19:33.11:1087,33,0	0/0:30,0:30:75.25:0,75,4034	0/0:27,0:27:78.24:0,78,3792	0/0:43,0:43:99:0,129,7172	1/1:2,21:23:63.15:2072,63,0	1/1:1,29:30:66.05:2258,66,0	1/1:2,9:11:17.98:529,18,0	1/1:1,18:19:45.15:1540,45,0	1/1:5,34:39:99:3109,102,0	0/0:44,0:44:99:0,129,6473	1/1:2,6:8:15.05:514,15,0
chr10	48960595	.	GA	G	7298.02	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=9.394;DP=588;FS=2.417;HRun=2;HaplotypeScore=59.7671;InbreedingCoeff=0.9982;MQ=82.73;MQ0=0;MQRankSum=-4.949;QD=34.26;ReadPosRankSum=3.042;VQSLOD=5.1546;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,117,1744	0/0:7,0:7:21.07:0,21,308	0/0:27,0:27:75.18:0,75,1022	0/0:21,0:21:56.68:0,57,803	1/1:1,11:12:30.10:389,30,0	0/0:19,0:19:57.17:0,57,810	0/0:29,0:29:87.27:0,87,1261	1/1:1,31:32:93.26:1164,93,0	0/0:17,0:17:48.16:0,48,716	1/1:2,21:23:63.20:817,63,0	1/1:0,10:10:27.09:350,27,0	0/0:19,0:19:54.18:0,54,796	0/0:17,0:17:48.15:0,48,697	1/1:0,21:21:57.19:739,57,0	0/0:25,0:25:75.24:0,75,1094	0/0:25,0:25:75.25:0,75,1103	1/1:1,37:38:99:1273,99,0	1/1:1,27:28:72.23:930,72,0	0/0:25,0:25:69.20:0,69,963	0/0:19,0:19:57.19:0,57,853	0/0:16,0:16:42.14:0,42,629	0/0:11,0:11:33.10:0,33,475	0/0:9,0:9:24.08:0,24,360	0/0:26,0:26:78.26:0,78,1165	1/1:1,14:15:33.11:428,33,0	1/1:1,25:26:72.23:934,72,0	0/0:24,0:24:72.24:0,72,1079	1/1:0,8:8:21.07:273,21,0
chr10	48961366	.	TTGTC	T	6581.72	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=13.467;DP=684;FS=3.242;HRun=0;HaplotypeScore=118.9550;InbreedingCoeff=0.9933;MQ=75.21;MQ0=0;MQRankSum=-3.354;QD=49.86;ReadPosRankSum=3.241;VQSLOD=5.7212;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,102,2794	0/0:9,0:9:27.09:0,27,739	0/0:15,0:15:12.91:0,13,861	0/0:33,0:33:79.77:0,80,2304	0/0:21,0:21:63.22:0,63,1673	0/0:27,0:27:78.27:0,78,2115	0/0:27,0:27:66.23:0,66,1755	0/0:19,0:19:57.20:0,57,1551	0/0:29,0:29:84.27:0,84,2206	0/0:26,0:26:78.27:0,78,2129	0/0:9,0:9:24.08:0,24,657	1/1:3,39:42:99:2133,111,0	1/1:1,31:32:93.32:1785,93,0	0/0:25,0:25:75.24:0,75,1995	0/0:38,0:38:99:0,114,3110	0/0:29,0:29:84.29:0,84,2289	0/0:31,0:31:93.30:0,93,2487	0/0:18,0:18:54.19:0,54,1480	0/0:15,0:15:45.15:0,45,1221	0/0:22,0:22:66.23:0,66,1769	0/0:48,0:48:99:0,135,3629	1/1:2,15:17:42.14:814,42,0	1/1:1,17:18:45.15:862,45,0	1/1:0,23:23:51.17:989,51,0	0/0:24,0:24:69.24:0,69,1878	0/0:15,0:15:45.15:0,45,1139	0/0:25,0:25:75.26:0,75,1991	0/0:11,0:11:30.10:0,30,821
chr10	48961857	.	CAAAAA	C	7851.91	PASS	AB=0.750;AC=29;AF=0.518;AN=56;BaseQRankSum=12.021;DP=523;FS=5.770;HRun=18;HaplotypeScore=129.9248;InbreedingCoeff=0.8726;MQ=59.16;MQ0=4;MQRankSum=-14.224;QD=27.36;ReadPosRankSum=9.844;VQSLOD=2.3279;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:25:62.84:0,63,1226	0/0:8,0:10:24.08:0,24,572	0/0:28,0:16:24.17:0,24,370	0/0:12,0:7:5.93:0,6,94	1/1:10,21:31:48.85:739,49,0	0/0:21,0:20:51.16:0,51,1047	0/0:5,0:6:15.05:0,15,303	1/1:15,15:27:38.18:545,38,0	0/0:17,0:16:42.14:0,42,960	1/1:3,16:19:47.53:696,48,0	1/1:1,15:16:35.62:522,36,0	1/1:7,20:27:53.31:784,53,0	1/1:1,14:14:39.13:567,39,0	1/1:5,16:21:44.16:652,44,0	0/0:21,0:21:45.15:0,45,1085	0/0:21,0:22:42.14:0,42,937	1/1:2,17:19:41.86:603,42,0	0/1:6,3:9:21.39:78,0,21	0/0:15,0:16:33.10:0,33,652	0/0:13,0:21:44.82:0,45,737	0/0:6,0:9:15.05:0,15,338	1/1:4,16:20:44.50:653,44,0	1/1:3,11:14:29.51:435,30,0	1/1:7,6:13:0.58:40,1,0	1/1:6,17:23:47.15:696,47,0	1/1:8,13:21:13.75:537,14,0	0/0:16,0:27:63.27:0,63,1204	1/1:1,8:8:20.90:305,21,0
chr10	48963298	.	C	CGT	1721.84	PASS	AB=0.803;AC=30;AF=0.556;AN=54;BaseQRankSum=9.912;DP=626;FS=13.320;HRun=0;HaplotypeScore=141.4225;InbreedingCoeff=0.6707;MQ=53.22;MQ0=8;MQRankSum=-10.284;QD=5.88;ReadPosRankSum=-7.184;VQSLOD=-0.5582;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:61,0:64:99:0,145,1498	0/0:14,0:15:35.88:0,36,369	1/1:25,0:11:0.47:1,0,0	./.	1/1:17,0:16:4.81:29,5,0	0/0:26,0:26:62.99:0,63,685	0/0:29,1:30:10.31:0,10,556	1/1:26,0:26:1.60:235,2,0	0/0:21,0:21:0.35:0,0,409	1/1:21,0:20:35.05:272,35,0	1/1:19,0:19:5.32:34,5,0	0/1:9,5:14:6.14:94,0,6	1/1:7,6:15:18.02:202,18,0	1/1:9,0:9:11.57:84,12,0	0/0:14,0:14:33.10:0,33,382	0/0:17,0:18:4.89:0,5,241	1/1:21,0:21:4.12:73,4,0	1/1:20,0:20:22.26:182,22,0	0/0:15,0:13:21.06:0,21,242	0/0:41,0:41:20.22:0,20,861	0/0:39,0:44:80.36:0,80,796	1/1:10,3:14:7.67:101,8,0	1/1:18,2:25:5.26:88,5,0	0/1:17,0:20:8.75:10,0,9	1/1:15,2:17:26.25:200,26,0	1/1:24,0:24:23.88:186,24,0	0/0:22,0:22:38.98:0,39,409	1/1:6,0:6:14.95:120,15,0
chr10	48963318	.	T	TGTGTGTGC	7330.06	PASS	AB=1.000;AC=30;AF=0.536;AN=56;BaseQRankSum=9.034;DP=651;FS=7.162;HRun=0;HaplotypeScore=193.6435;InbreedingCoeff=0.7769;MQ=54.20;MQ0=8;MQRankSum=-9.677;QD=22.91;ReadPosRankSum=-1.358;VQSLOD=3.3429;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:68,0:68:99:0,189,3721	0/0:15,0:15:42.12:0,42,988	0/1:17,0:9:0.83:1,0,39	0/0:13,0:4:3:0,3,27	1/1:3,16:25:3.28:68,3,0	0/0:29,0:29:75.14:0,75,1631	0/0:30,0:30:72.08:0,72,1530	1/1:27,0:27:56.37:733,56,0	0/0:23,0:23:58.30:0,58,1147	1/1:4,17:24:56.87:1375,57,0	1/1:3,14:19:3.01:115,3,0	0/1:11,0:11:12.62:164,0,13	1/1:12,0:12:19.80:299,20,0	1/1:3,8:14:8.86:377,9,0	0/0:20,0:20:54.06:0,54,1077	0/0:11,0:11:5.11:0,5,618	1/1:8,17:29:15.04:438,15,0	1/1:16,2:20:41.67:791,42,0	0/0:18,0:16:33.09:0,33,634	0/0:40,0:40:99:0,104,2212	0/0:41,0:41:99:0,109,1996	1/1:15,0:14:9.47:220,9,0	1/1:24,0:24:13.65:253,14,0	1/1:26,0:25:11.28:117,11,0	1/1:3,18:24:26.93:1115,27,0	1/1:2,21:26:42.18:679,42,0	0/0:22,0:22:62.94:0,63,1035	1/1:0,4:6:15.05:585,15,0
chr10	48963324	.	C	CGTG	500.27	PASS	AB=0.895;AC=17;AF=0.304;AN=56;BaseQRankSum=11.672;DP=628;FS=10.188;HRun=0;HaplotypeScore=164.7450;InbreedingCoeff=0.2157;MQ=56.05;MQ0=7;MQRankSum=-8.568;QD=1.99;ReadPosRankSum=0.824;VQSLOD=2.2628;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:67,0:67:99:0,187,3213	0/0:15,0:15:45.15:0,45,785	0/0:12,0:6:11.48:0,11,149	0/0:11,0:3:2.99:0,3,24	1/1:22,0:21:11.65:72,12,0	0/0:27,0:27:78.27:0,78,1369	0/0:31,0:31:90.29:0,90,1524	0/0:27,0:27:9.06:0,9,548	0/0:19,0:19:54.18:0,54,913	0/1:22,0:23:89.67:90,0,187	0/1:18,0:18:15.17:15,0,45	0/1:8,0:10:32.75:33,0,97	1/1:11,0:13:10.26:100,10,0	0/1:15,0:15:0.01:28,0,0	0/0:18,0:18:54.19:0,54,951	0/0:10,0:10:27.06:0,27,465	0/1:28,0:28:34.81:35,0,124	0/1:21,0:21:9.69:10,0,284	0/0:17,0:15:39.13:0,39,686	0/0:40,0:40:99:0,108,1806	0/0:40,0:40:99:0,106,1801	1/1:6,0:15:7.33:60,7,0	0/1:4,2:26:34.38:91,0,34	0/1:21,0:27:23.24:23,0,36	0/1:23,0:25:41.23:41,0,92	0/0:21,0:21:3.51:0,4,324	0/0:21,0:21:57.19:0,57,989	1/1:7,0:7:13.70:76,14,0
chr10	48963330	.	CGT	C	646.53	PASS	AB=0.940;AC=15;AF=0.268;AN=56;BaseQRankSum=8.553;DP=616;FS=1.050;HRun=0;HaplotypeScore=151.9119;InbreedingCoeff=-0.1999;MQ=60.21;MQ0=6;MQRankSum=-3.374;QD=2.39;ReadPosRankSum=-5.859;VQSLOD=0.5420;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:67,0:67:99:0,154,2894	0/0:15,0:15:44.64:0,45,641	0/0:11,0:8:1.55:0,2,95	0/0:8,0:4:2.80:0,3,13	0/0:19,1:19:14.26:0,14,70	0/0:27,0:27:78.19:0,78,1244	0/0:32,0:32:85.89:0,86,1451	0/1:18,0:18:21.91:83,0,22	0/0:21,0:21:57.12:0,57,881	0/1:20,2:22:92.95:93,0,112	0/1:16,0:16:7.74:8,0,25	0/1:10,0:10:23.69:33,0,24	0/1:9,6:15:29.78:32,0,30	0/1:15,0:15:8.31:50,0,8	0/0:19,0:19:57.15:0,57,910	0/0:9,0:9:23.92:0,24,340	1/1:30,0:30:0.85:97,1,0	0/1:23,0:23:15.59:111,0,16	0/0:19,0:17:51.06:0,51,672	0/0:38,0:38:85.10:0,85,1633	0/0:38,0:38:99:0,104,1647	0/1:16,2:17:7.15:76,0,7	0/1:22,0:22:25.68:109,0,26	0/1:15,12:26:8.80:55,0,9	0/1:26,0:26:25.75:26,0,67	0/1:22,0:22:17.05:17,0,58	0/0:21,0:21:60.14:0,60,892	0/1:7,0:7:7.36:7,0,43
chr10	48964972	.	TGA	T	15721.81	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=20.479;DP=700;FS=9.838;HRun=0;HaplotypeScore=118.6932;InbreedingCoeff=0.9996;MQ=92.63;MQ0=0;MQRankSum=-8.286;QD=44.92;ReadPosRankSum=4.138;VQSLOD=5.3925;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,120,2423	0/0:11,0:11:33.11:0,33,670	0/0:31,0:31:90.30:0,90,1775	0/0:32,0:32:93.32:0,93,1811	1/1:0,23:23:57.13:897,57,0	0/0:19,0:19:53.77:0,54,1055	0/0:15,0:15:45.13:0,45,875	1/1:0,30:30:90.29:1421,90,0	0/0:26,0:26:78.25:0,78,1536	1/1:0,29:29:87.27:1355,87,0	1/1:0,16:16:45.15:733,45,0	1/1:0,20:20:57.19:929,57,0	1/1:0,20:20:54.18:873,54,0	1/1:0,22:22:60.20:978,60,0	0/0:32,0:32:96.32:0,96,1903	0/0:28,0:28:84.29:0,84,1686	1/1:0,27:27:75.73:1217,76,0	1/1:0,22:22:63.21:1020,63,0	0/0:25,0:25:75.21:0,75,1310	0/0:26,0:26:78.27:0,78,1571	0/0:25,0:25:75.26:0,75,1512	1/1:0,31:31:84.16:1308,84,0	1/1:0,19:19:57.19:929,57,0	1/1:0,13:13:39.13:636,39,0	1/1:1,30:31:23.33:1260,23,0	1/1:0,34:34:99:1578,102,0	0/0:38,0:38:99:0,114,2095	1/1:0,13:13:36.12:587,36,0
chr10	48966517	.	GC	G	3479.15	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=14.460;DP=601;FS=18.145;HRun=1;HaplotypeScore=78.8188;InbreedingCoeff=0.9941;MQ=90.49;MQ0=0;MQRankSum=-0.460;QD=34.45;ReadPosRankSum=2.621;VQSLOD=2.0561;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,129,1867	0/0:5,0:5:15.05:0,15,229	0/0:22,0:22:41:0,41,669	0/0:26,0:26:64.81:0,65,826	0/0:27,0:27:81.12:0,81,1140	0/0:28,0:28:84.25:0,84,1240	0/0:27,0:27:81.23:0,81,1193	0/0:22,0:22:66.21:0,66,972	0/0:22,0:22:66.22:0,66,1006	0/0:12,0:12:33.11:0,33,505	0/0:14,0:14:41.81:0,42,596	1/1:0,20:20:57.18:705,57,0	1/1:4,23:27:78.17:920,78,0	0/0:17,0:17:48.04:0,48,679	0/0:26,0:26:78.23:0,78,1147	0/0:22,0:22:66.18:0,66,947	0/0:34,0:34:99:0,99,1489	0/0:15,0:15:42.10:0,42,617	0/0:15,0:15:44.95:0,45,587	0/0:23,0:23:69.20:0,69,989	0/0:24,0:24:72.19:0,72,1033	1/1:1,15:16:45.14:556,45,0	1/1:0,10:10:27.08:333,27,0	1/1:3,24:28:81.19:964,81,0	0/0:22,0:22:66.07:0,66,953	0/0:22,0:22:63.20:0,63,945	0/0:25,0:25:75.24:0,75,1121	0/0:6,0:6:18.06:0,18,275
chr10	48967925	.	CT	C	3809.55	PASS	AB=0.668;AC=20;AF=0.357;AN=56;BaseQRankSum=0.088;DP=540;FS=6.316;HRun=11;HaplotypeScore=70.6492;InbreedingCoeff=0.8016;MQ=69.17;MQ0=0;MQRankSum=1.764;QD=17.97;ReadPosRankSum=-0.779;VQSLOD=4.3381;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,1:23:10.72:0,11,489	0/0:6,0:6:15.04:0,15,159	0/0:16,0:11:9.45:0,9,84	0/0:4,0:3:3.88:0,4,32	1/1:3,20:23:27.92:436,28,0	0/0:6,0:21:28.59:0,29,153	0/0:3,0:16:31.32:0,31,157	1/1:8,25:33:40.58:575,41,0	0/0:4,0:20:48.92:0,49,255	1/1:3,24:29:75.98:603,76,0	1/1:4,17:22:49.94:400,50,0	0/0:4,0:15:22.73:0,23,114	0/0:3,0:20:32.49:0,32,159	1/1:4,14:18:41.81:336,42,0	0/0:13,0:13:36.08:0,36,376	0/0:15,0:15:39.10:0,39,416	0/1:4,15:19:25.03:232,0,25	1/1:0,6:6:11.99:99,12,0	0/0:20,1:21:23.44:0,23,436	0/0:37,0:38:93.56:0,94,969	0/1:5,2:7:28.25:28,0,132	0/0:2,0:14:28.35:0,28,147	0/0:4,0:23:46.98:0,47,246	0/0:2,0:21:42.61:0,43,213	1/1:0,15:16:46.99:375,47,0	1/1:3,17:21:23.97:392,24,0	0/0:37,3:41:40.02:0,40,1010	1/1:3,14:18:44.37:334,44,0
chr10	48971846	.	C	CGTGTGT	9246.21	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=0.589;DP=832;FS=16.444;HRun=0;HaplotypeScore=184.7249;InbreedingCoeff=0.9739;MQ=71.11;MQ0=2;MQRankSum=-9.900;QD=35.70;ReadPosRankSum=-1.923;VQSLOD=2.9809;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,108,1977	0/0:15,0:15:39.05:0,39,764	0/0:35,0:32:51.10:0,51,800	0/0:52,0:40:57.29:0,57,1052	1/1:4,13:18:27.09:823,27,0	0/0:25,0:25:57.06:0,57,1050	0/0:28,0:28:57.19:0,57,1233	1/1:12,19:33:68.92:1381,69,0	0/0:23,0:23:63.13:0,63,1275	1/1:6,30:38:72.08:1582,72,0	1/1:4,16:21:18.06:549,18,0	0/0:41,0:41:99:0,103,1833	0/0:38,0:38:99:0,99,1803	1/1:10,35:49:42.62:1427,43,0	0/0:43,0:42:99:0,111,2211	0/0:32,0:32:84.13:0,84,1559	1/1:13,10:23:9.03:284,9,0	1/1:7,10:21:27.05:730,27,0	0/0:20,0:20:34.66:0,35,666	0/0:19,0:19:47.97:0,48,873	0/0:57,0:57:99:0,147,2887	0/0:32,0:32:54.15:0,54,1578	0/0:20,0:20:54.01:0,54,950	0/0:36,0:36:89.49:0,89,1667	1/1:3,19:23:33.11:1057,33,0	1/1:5,22:29:56.54:1288,57,0	0/0:16,0:16:36.10:0,36,711	1/1:1,1:2:6:125,6,0
chr10	48972157	.	A	AT	8237.52	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-12.891;DP=627;FS=1.769;HRun=9;HaplotypeScore=60.9797;InbreedingCoeff=0.9791;MQ=75.44;MQ0=0;MQRankSum=-3.794;QD=26.32;ReadPosRankSum=-0.465;VQSLOD=5.2529;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,132,1140	0/0:10,0:10:26.99:0,27,234	0/0:15,0:14:35.98:0,36,309	0/0:15,0:15:32.97:0,33,283	1/1:3,22:26:33.86:558,34,0	0/0:21,0:21:53.97:0,54,469	0/0:19,0:19:50.98:0,51,442	1/1:3,24:28:69.68:781,70,0	0/0:26,0:26:71.97:0,72,625	1/1:2,22:24:63.17:697,63,0	1/1:2,13:16:38.94:412,39,0	1/1:3,26:29:47.02:739,47,0	1/1:5,20:25:51.14:561,51,0	1/1:3,11:14:33.09:364,33,0	0/0:27,0:27:62.96:0,63,547	0/0:26,0:26:71.99:0,72,625	1/1:4,22:28:68.85:725,69,0	1/1:1,9:10:4.03:272,4,0	0/0:20,0:20:53.98:0,54,469	0/0:29,0:29:80.98:0,81,703	0/0:25,0:25:62.97:0,63,546	1/1:1,26:27:46.14:737,46,0	1/1:2,15:17:42.11:462,42,0	1/1:4,19:23:51.14:564,51,0	1/1:2,13:15:42.11:457,42,0	1/1:0,21:22:62.97:659,63,0	0/0:31,0:32:83:0,83,705	1/1:1,7:9:23.90:246,24,0
chr10	48972621	.	TTTTTCTTTTC	T	8873.11	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=8.416;DP=519;FS=0.000;HRun=0;HaplotypeScore=163.7365;InbreedingCoeff=0.9857;MQ=67.43;MQ0=3;MQRankSum=-10.057;QD=35.92;ReadPosRankSum=-1.188;VQSLOD=4.3544;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:81.23:0,81,3705	0/0:9,0:9:24.05:0,24,953	0/0:23,0:15:14.78:0,15,397	0/0:35,0:18:27.10:0,27,372	1/1:13,10:23:53.98:877,54,0	0/0:24,0:24:63.20:0,63,2865	0/0:18,0:18:45.14:0,45,1909	1/1:21,1:21:38.75:364,39,0	0/0:14,0:14:36.01:0,36,1194	1/1:12,3:14:23.99:329,24,0	1/1:11,5:16:32.92:534,33,0	1/1:9,6:15:33.03:648,33,0	1/1:9,10:19:48.05:1017,48,0	1/1:7,3:10:20.96:352,21,0	0/0:16,0:16:36.12:0,36,1744	0/0:17,0:17:42.08:0,42,1521	1/1:15,2:17:29.92:363,30,0	1/1:7,3:10:18.02:362,18,0	0/0:13,0:12:24.07:0,24,975	0/0:26,0:26:63.13:0,63,2221	0/0:11,0:11:30.08:0,30,1179	1/1:8,7:14:36:609,36,0	1/1:9,11:20:51.09:1103,51,0	1/1:8,0:8:8.93:66,9,0	1/1:15,8:23:18.88:870,19,0	1/1:11,6:17:39.02:699,39,0	0/0:35,0:35:87.19:0,87,3285	1/1:11,6:17:36.05:680,36,0
chr10	48972651	.	CT	C	3976.77	PASS	AB=0.519;AC=29;AF=0.518;AN=56;BaseQRankSum=14.223;DP=453;FS=2.333;HRun=9;HaplotypeScore=95.4478;InbreedingCoeff=0.9237;MQ=52.87;MQ0=16;MQRankSum=-14.586;QD=23.67;ReadPosRankSum=1.264;VQSLOD=4.0617;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:77.86:0,78,898	0/0:7,0:7:21.07:0,21,264	0/0:35,0:11:18.43:0,18,180	0/0:34,0:9:4.51:0,5,124	1/1:0,17:16:36.01:325,36,0	0/0:26,0:26:72.22:0,72,892	0/0:17,0:17:39.11:0,39,477	1/1:1,12:12:36.01:340,36,0	0/0:12,0:12:36.11:0,36,441	1/1:0,7:6:18:168,18,0	1/1:0,7:7:17.99:157,18,0	1/1:0,10:10:30.01:270,30,0	1/1:0,20:20:60.03:549,60,0	1/1:0,8:7:21.01:194,21,0	0/0:18,0:18:54.17:0,54,679	0/0:14,0:14:27.08:0,27,328	1/1:0,8:8:24.03:229,24,0	1/1:2,4:6:11.99:106,12,0	0/0:19,0:9:21.02:0,21,232	0/0:28,0:28:78.22:0,78,951	0/0:12,0:12:27.07:0,27,324	1/1:0,15:13:36.03:335,36,0	1/1:0,18:18:50.98:449,51,0	1/1:1,4:5:12.02:120,12,0	1/1:1,12:13:32.98:285,33,0	0/1:1,13:13:1.72:265,0,2	0/0:33,0:33:93.30:0,93,1167	1/1:0,7:7:20.99:185,21,0
chr10	48972716	.	GCT	G	3765.47	PASS	AB=0.556;AC=29;AF=0.518;AN=56;BaseQRankSum=16.214;DP=483;FS=34.750;HRun=0;HaplotypeScore=135.4165;InbreedingCoeff=0.8688;MQ=59.29;MQ0=3;MQRankSum=-15.661;QD=17.60;ReadPosRankSum=2.865;VQSLOD=2.0788;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:84.27:0,84,1518	0/0:9,0:9:27.09:0,27,496	0/0:14,0:13:36.12:0,36,668	0/0:16,0:12:36.12:0,36,653	0/1:3,12:12:32.35:143,0,32	0/0:26,0:25:72.25:0,72,1341	0/0:20,0:20:60.21:0,60,1115	1/1:5,7:12:21.04:211,21,0	0/0:16,0:16:48.16:0,48,899	1/1:4,14:17:39.05:372,39,0	1/1:1,17:16:35.99:325,36,0	1/1:4,6:10:17.99:156,18,0	1/1:5,14:19:42.03:386,42,0	1/1:2,15:16:39.02:354,39,0	0/0:23,0:23:66.23:0,66,1229	0/0:17,0:17:48.16:0,48,899	1/1:4,4:8:9.01:84,9,0	1/1:1,1:2:3:26,3,0	0/0:17,0:14:42.14:0,42,786	0/0:27,0:27:81.28:0,81,1507	0/0:16,0:16:48.16:0,48,891	1/1:2,11:11:24:211,24,0	1/1:5,8:12:20.99:186,21,0	1/1:3,7:10:12:107,12,0	1/1:3,21:21:51.05:473,51,0	1/1:6,20:26:3.82:468,4,0	0/0:37,0:36:99:0,105,1966	1/1:0,9:9:27.04:263,27,0
chr10	48972721	.	ACCACC	A	7474.68	PASS	AB=0.512;AC=29;AF=0.518;AN=56;BaseQRankSum=16.741;DP=461;FS=31.188;HRun=0;HaplotypeScore=139.9117;InbreedingCoeff=0.8870;MQ=63.83;MQ0=1;MQRankSum=-16.798;QD=43.97;ReadPosRankSum=4.015;VQSLOD=3.2976;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:87.30:0,87,2811	0/0:8,0:8:24.08:0,24,796	0/0:15,0:15:42.14:0,42,1354	0/0:14,0:13:39.13:0,39,1271	1/1:1,12:10:13.06:354,13,0	0/0:30,0:29:87.30:0,87,2863	0/0:24,0:24:72.25:0,72,2349	1/1:0,7:7:21.07:390,21,0	0/0:18,0:18:54.19:0,54,1758	1/1:0,14:13:39.13:705,39,0	1/1:0,17:15:39.09:652,39,0	1/1:0,7:7:21.07:347,21,0	1/1:0,14:14:42.14:744,42,0	1/1:0,15:14:39.13:688,39,0	0/0:25,0:25:72.25:0,72,2368	0/0:18,0:18:51.07:0,51,1659	1/1:0,4:4:9.03:161,9,0	1/1:0,1:1:3.01:52,3,0	0/0:21,0:19:57.20:0,57,1876	0/0:29,0:29:87.28:0,87,2771	0/0:19,0:19:57.20:0,57,1898	1/1:0,11:9:27.05:436,27,0	1/1:0,7:7:21.07:365,21,0	1/1:0,7:7:12.04:209,12,0	1/1:1,21:19:54.14:928,54,0	0/1:1,20:21:39.73:950,0,40	0/0:39,0:38:99:0,117,3849	1/1:0,9:9:27.09:493,27,0
chr10	48973621	.	TC	T	8339.55	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=16.088;DP=761;FS=2.058;HRun=2;HaplotypeScore=67.0900;InbreedingCoeff=0.9970;MQ=56.94;MQ0=12;MQRankSum=-3.242;QD=35.04;ReadPosRankSum=1.389;VQSLOD=5.3782;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:63.20:0,63,921	0/0:13,0:13:39.13:0,39,585	0/0:25,0:8:21.04:0,21,281	0/0:21,0:10:27.08:0,27,387	1/1:0,27:27:78.25:1011,78,0	0/0:32,0:32:96.31:0,96,1420	0/0:24,0:23:69.23:0,69,1034	1/1:2,26:26:72.22:922,72,0	0/0:33,0:33:99:0,99,1484	1/1:1,28:29:84.27:1091,84,0	1/1:1,25:26:75.24:974,75,0	0/0:31,0:32:93.30:0,93,1369	0/0:34,0:34:99:0,99,1480	1/1:1,22:23:60.19:779,60,0	0/0:28,0:28:84.28:0,84,1258	0/0:31,0:31:93.30:0,93,1371	1/1:2,22:24:15.26:695,15,0	1/1:1,25:25:72.23:934,72,0	0/0:27,0:23:66.16:0,66,909	0/0:43,0:43:99:0,129,1892	0/0:36,0:36:99:0,105,1551	0/0:18,0:18:54.18:0,54,809	0/0:33,0:33:96.03:0,96,1394	0/0:22,0:22:66.22:0,66,989	1/1:1,15:16:39.13:506,39,0	1/1:0,23:23:69.21:882,69,0	0/0:50,0:50:99:0,150,2207	1/1:0,16:16:42.14:545,42,0
chr10	48975133	.	ACC	A	2864.89	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=7.338;DP=560;FS=4.022;HRun=9;HaplotypeScore=73.5527;InbreedingCoeff=0.9995;MQ=80.06;MQ0=1;MQRankSum=-0.312;QD=26.77;ReadPosRankSum=4.606;VQSLOD=3.6279;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:63.20:0,63,1001	0/0:12,0:13:32.58:0,33,454	0/0:21,0:20:48.12:0,48,671	0/0:17,0:15:31.80:0,32,438	0/0:18,0:19:53.63:0,54,749	0/0:29,0:29:87.28:0,87,1381	0/0:15,0:15:42.11:0,42,616	0/0:26,0:26:54.15:0,54,816	0/0:16,0:17:51.16:0,51,789	0/0:17,0:17:45.15:0,45,718	0/0:26,0:26:66.18:0,66,986	1/1:2,26:27:72.21:839,72,0	1/1:1,18:19:45.13:524,45,0	0/0:17,0:17:42.13:0,42,667	0/0:33,0:34:86.78:0,87,1381	0/0:20,0:20:54.18:0,54,864	0/0:10,0:10:30.10:0,30,492	0/0:16,0:17:47.62:0,48,694	0/0:8,0:17:39.08:0,39,438	0/0:3,0:15:35.98:0,36,327	0/0:2,0:15:36.05:0,36,346	1/1:3,19:22:54.16:629,54,0	1/1:3,20:23:57.17:664,57,0	1/1:1,14:15:33.10:385,33,0	0/0:12,0:12:33.10:0,33,517	0/0:28,0:28:81.25:0,81,1280	0/0:5,0:24:50.80:0,51,508	0/0:16,0:16:39.12:0,39,614
chr10	48975747	.	A	AG	8365.58	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-6.262;DP=627;FS=8.883;HRun=8;HaplotypeScore=74.7041;InbreedingCoeff=0.9991;MQ=88.45;MQ0=1;MQRankSum=-3.117;QD=20.86;ReadPosRankSum=1.686;VQSLOD=5.0125;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,114,1029	0/0:12,0:12:30.01:0,30,274	0/0:32,0:30:49.22:0,49,435	0/0:22,0:22:44.85:0,45,394	1/1:4,20:24:51.02:555,51,0	0/0:29,0:29:78.02:0,78,710	0/0:17,0:17:39.01:0,39,353	1/1:8,20:29:29.58:549,30,0	0/0:21,0:21:54.03:0,54,494	1/1:11,15:27:47.99:500,48,0	1/1:1,16:18:41.91:449,42,0	1/1:2,2:19:42.95:256,43,0	1/1:5,2:24:45.79:271,46,0	1/1:1,14:15:36.11:415,36,0	0/0:26,0:26:68.99:0,69,620	0/0:27,0:27:72:0,72,645	1/1:1,14:15:42.12:483,42,0	1/1:2,11:13:30.09:346,30,0	1/1:1,16:17:42.11:476,42,0	1/1:3,21:24:63.19:726,63,0	1/1:7,25:32:60.18:692,60,0	1/1:4,0:16:25.57:129,26,0	1/1:5,0:19:25.57:130,26,0	1/1:2,2:18:36.93:188,37,0	1/1:3,10:13:27.08:312,27,0	1/1:11,26:37:75.18:851,75,0	1/1:7,16:23:42.12:484,42,0	1/1:0,17:17:48.14:554,48,0
chr10	48975984	.	TG	T	3501.15	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=7.488;DP=661;FS=5.360;HRun=1;HaplotypeScore=69.1067;InbreedingCoeff=0.9994;MQ=83.75;MQ0=0;MQRankSum=-2.707;QD=39.34;ReadPosRankSum=-2.066;VQSLOD=3.4401;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,120,1846	0/0:8,0:8:24.08:0,24,383	0/0:25,0:25:69.22:0,69,1029	0/0:18,0:18:54.16:0,54,812	0/0:33,0:33:93.32:0,93,1479	0/0:29,0:29:87.30:0,87,1389	0/0:19,0:19:57.18:0,57,887	0/0:36,0:36:99:0,105,1609	0/0:27,0:27:81.25:0,81,1266	0/0:22,0:22:66.22:0,66,1021	0/0:24,0:24:72.21:0,72,1102	0/0:24,0:24:72.23:0,72,1127	0/0:27,0:27:81.17:0,81,1214	0/0:26,0:26:78.27:0,78,1244	0/0:31,0:31:93.30:0,93,1462	0/0:23,0:23:69.22:0,69,1078	0/0:20,0:20:54.18:0,54,863	0/0:15,0:15:45.12:0,45,692	1/1:0,14:14:42.11:567,42,0	1/1:0,32:32:96.23:1298,96,0	1/1:0,24:24:66.22:923,66,0	0/0:19,0:19:57.19:0,57,907	0/0:19,0:19:57.18:0,57,887	0/0:21,0:21:63.20:0,63,982	0/0:21,0:21:63.10:0,63,926	0/0:31,0:31:93.32:0,93,1484	1/1:0,19:19:51.17:713,51,0	0/0:14,0:13:42.08:0,42,596
chr10	48977302	.	G	GTTT	4102.12	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-9.227;DP=609;FS=0.979;HRun=8;HaplotypeScore=92.6567;InbreedingCoeff=0.9976;MQ=70.13;MQ0=1;MQRankSum=-2.617;QD=42.29;ReadPosRankSum=2.336;VQSLOD=3.6808;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:93.23:0,93,1173	0/0:9,0:9:27.06:0,27,326	0/0:19,0:18:46.57:0,47,529	0/0:9,0:9:17.70:0,18,171	0/0:35,0:35:99:0,99,1270	0/0:19,0:19:57.17:0,57,733	0/0:16,0:16:42.12:0,42,552	0/0:33,0:35:61.61:0,62,759	0/0:19,0:19:48.13:0,48,616	0/0:32,0:32:84.19:0,84,1031	0/0:19,0:20:49.71:0,50,666	1/1:2,18:21:42.14:849,42,0	1/1:3,21:25:57.20:1133,57,0	0/0:18,0:18:51.15:0,51,654	0/0:26,0:26:75.22:0,75,971	0/0:24,0:24:69.21:0,69,892	0/0:16,0:16:39.09:0,39,498	0/0:16,0:16:42.11:0,42,537	0/0:20,0:20:39.07:0,39,499	0/0:29,0:29:78.23:0,78,1009	0/0:18,0:18:48.15:0,48,629	1/1:0,14:14:39.09:747,39,0	1/1:1,16:18:39.05:706,39,0	1/1:2,17:19:33.11:667,33,0	0/0:21,0:21:57.15:0,57,733	0/0:26,0:26:72.22:0,72,934	0/0:30,0:30:79.76:0,80,1031	0/0:21,0:21:51.15:0,51,667
chr10	48978991	.	GTT	G	9895.75	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=12.759;DP=747;FS=3.871;HRun=9;HaplotypeScore=101.7298;InbreedingCoeff=0.9770;MQ=79.52;MQ0=5;MQRankSum=-2.275;QD=25.57;ReadPosRankSum=5.148;VQSLOD=4.5537;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:57:99:0,168,2662	0/0:12,0:12:27.08:0,27,416	0/0:38,0:29:58.02:0,58,829	0/0:37,0:35:3.45:0,3,561	1/1:2,26:28:72.20:835,72,0	0/0:20,0:20:60.20:0,60,958	0/0:22,0:22:63.16:0,63,916	1/1:2,20:22:57.10:621,57,0	0/0:24,0:24:69.16:0,69,978	1/1:3,25:28:75.16:831,75,0	1/1:6,17:23:45.09:513,45,0	1/1:3,27:27:47.79:558,48,0	1/1:1,17:18:42.12:489,42,0	1/1:4,35:39:84.25:978,84,0	0/0:29,0:29:75.23:0,75,1163	0/0:29,0:29:75.24:0,75,1182	1/1:4,22:26:53.89:600,54,0	1/1:1,28:29:54.16:629,54,0	0/0:24,0:24:57.14:0,57,836	0/0:18,0:18:54.11:0,54,745	0/0:21,0:23:65.18:0,65,955	1/1:5,11:16:32.74:382,33,0	1/1:3,13:16:24.62:341,25,0	1/1:2,43:44:99:1187,102,0	1/1:1,26:27:63.19:733,63,0	1/1:0,28:28:78.19:884,78,0	0/0:25,0:25:62.65:0,63,1000	1/1:2,9:11:27.08:314,27,0
chr10	48979855	.	T	TGGTCCTCGA	40364.39	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-1.909;DP=743;FS=9.998;HRun=0;HaplotypeScore=205.4872;InbreedingCoeff=0.9957;MQ=72.48;MQ0=0;MQRankSum=-20.738;QD=104.57;ReadPosRankSum=-4.067;VQSLOD=3.6130;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,141,4102	0/0:16,0:16:48.16:0,48,1346	0/0:20,0:20:43.81:0,44,1478	0/0:16,0:16:36.20:0,36,1033	1/1:4,16:21:45.06:2023,45,0	0/0:24,0:24:72.25:0,72,2187	0/0:29,0:29:87.28:0,87,2477	1/1:11,15:31:90.25:3507,90,0	0/0:23,0:23:63.22:0,63,1842	1/1:5,18:24:69.24:2981,69,0	1/1:5,15:20:48.16:2194,48,0	1/1:16,0:33:78.22:2939,78,0	1/1:12,0:45:99:4688,111,0	1/1:12,19:35:90.31:4098,90,0	0/0:35,0:35:99:0,102,3008	0/0:21,0:21:54.18:0,54,1571	1/1:13,14:30:63.22:2651,63,0	1/1:8,9:20:51.18:2311,51,0	0/0:25,0:25:63.18:0,63,1623	0/0:21,0:21:60.21:0,60,1823	0/0:52,0:52:99:0,148,4422	1/1:7,0:21:51.18:2125,51,0	1/1:8,0:25:54.19:2314,54,0	1/1:12,0:21:41.74:1568,42,0	1/1:9,11:22:57.20:2679,57,0	1/1:9,18:32:90.27:3703,90,0	0/0:25,0:25:75.26:0,75,2251	1/1:0,4:6:12.04:582,12,0
chr10	48980352	.	G	GGT	6217.68	PASS	AB=1.000;AC=31;AF=0.554;AN=56;BaseQRankSum=10.825;DP=476;FS=45.717;HRun=0;HaplotypeScore=137.7470;InbreedingCoeff=0.9531;MQ=59.05;MQ0=6;MQRankSum=-10.783;QD=24.01;ReadPosRankSum=1.390;VQSLOD=2.9578;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:30:57.14:0,57,904	0/0:8,0:8:18.06:0,18,265	0/1:17,0:11:1.04:1,0,245	0/0:19,0:10:22.02:0,22,234	1/1:0,10:19:36.26:325,36,0	0/0:15,0:15:42.12:0,42,634	0/0:20,0:20:49.43:0,49,712	1/1:5,7:12:30.06:342,30,0	0/0:19,0:18:33.08:0,33,526	1/1:10,10:20:57.13:722,57,0	1/1:9,10:18:39.14:324,39,0	1/1:0,18:18:42.09:533,42,0	1/1:4,16:18:48.10:553,48,0	1/1:2,11:13:36.05:401,36,0	0/0:19,0:19:42.10:0,42,660	0/0:10,0:10:23.98:0,24,365	1/1:5,11:16:41.97:398,42,0	1/1:0,13:14:30.09:399,30,0	0/0:21,0:19:44.83:0,45,705	0/0:22,0:21:44.93:0,45,604	0/0:14,0:13:29.97:0,30,452	1/1:2,16:19:47.04:479,47,0	1/1:0,15:22:38.53:444,39,0	1/1:2,7:7:15.03:190,15,0	1/1:1,13:14:33.05:350,33,0	1/1:1,15:19:54.08:596,54,0	0/0:19,0:19:47.73:0,48,661	1/1:3,3:6:14.94:161,15,0
chr10	48980360	.	GT	G	289.92	PASS	AB=0.600;AC=18;AF=0.321;AN=56;BaseQRankSum=9.063;DP=475;FS=3.189;HRun=7;HaplotypeScore=139.3933;InbreedingCoeff=0.3833;MQ=50.92;MQ0=11;MQRankSum=-7.891;QD=1.52;ReadPosRankSum=0.772;VQSLOD=-0.2082;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:36:61.61:0,62,860	0/0:10,0:10:7.64:0,8,164	0/0:17,0:9:16.34:0,16,172	0/0:19,0:8:17.98:0,18,221	0/1:11,10:20:14.30:18,0,14	0/0:21,0:21:46.59:0,47,572	0/0:19,0:19:31.48:0,31,394	1/1:6,6:10:13.62:56,14,0	0/0:21,0:19:43.02:0,43,471	1/1:4,9:13:17.06:66,17,0	0/1:2,13:14:11.97:12,0,36	0/1:8,11:19:13.37:22,0,13	0/1:4,16:18:3.77:31,0,4	0/1:5,10:13:7.12:31,0,7	0/0:19,0:19:49.94:0,50,609	0/0:11,0:11:32.90:0,33,372	0/1:5,11:15:4.82:20,0,5	1/1:4,9:13:15.69:59,16,0	0/0:26,0:23:40.63:0,41,557	0/0:22,0:21:42.53:0,43,473	0/0:15,0:14:30.03:0,30,365	0/1:2,12:13:6.30:38,0,6	0/0:5,12:16:18.14:0,18,64	0/1:4,4:6:4.65:16,0,5	0/0:3,10:12:8.81:0,9,37	1/1:5,15:19:0.32:46,0,0	0/0:17,0:16:31.25:0,31,494	1/1:1,4:5:8.22:51,8,0
chr10	48980372	.	GTTT	G	2483.78	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=12.640;DP=485;FS=7.635;HRun=19;HaplotypeScore=138.6485;InbreedingCoeff=0.9089;MQ=39.18;MQ0=33;MQRankSum=-6.771;QD=12.00;ReadPosRankSum=5.944;VQSLOD=-0.5119;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,1:39:11.24:0,11,695	0/0:11,0:12:17.73:0,18,182	0/0:14,0:6:1.25:0,1,4	0/0:16,0:5:8.86:0,9,64	1/1:8,7:14:19.58:144,20,0	0/0:18,0:20:46.78:0,47,580	0/0:15,0:17:32.91:0,33,287	1/1:16,3:13:27.81:183,28,0	0/0:17,0:16:37.36:0,37,531	1/1:3,4:8:14.85:137,15,0	1/1:9,10:17:15.75:201,16,0	1/1:12,5:16:22.57:179,23,0	1/1:5,14:17:38.81:350,39,0	1/1:7,6:11:23.44:213,23,0	0/0:20,0:20:38.85:0,39,481	0/0:11,0:12:27.28:0,27,316	1/1:12,8:15:25.19:202,25,0	1/1:5,5:9:14.43:136,14,0	0/0:22,0:26:40.08:0,40,491	0/0:22,0:23:49.01:0,49,510	0/0:15,0:16:25.27:0,25,291	1/1:7,6:9:17.55:158,18,0	1/1:10,6:15:20.21:182,20,0	0/0:9,0:5:2.37:0,2,8	1/1:5,9:13:15.66:210,16,0	1/1:7,10:16:39.39:352,39,0	0/0:20,0:19:34.46:0,34,371	1/1:4,2:5:5.61:55,6,0
chr10	48980376	.	T	TG	1129.82	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=14.497;DP=487;FS=11.112;HRun=0;HaplotypeScore=128.0862;InbreedingCoeff=0.8975;MQ=36.03;MQ0=46;MQRankSum=-9.099;QD=5.09;ReadPosRankSum=4.779;VQSLOD=2.9172;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:38:71.71:0,72,611	0/0:12,0:11:26.94:0,27,251	0/0:11,0:3:8.57:0,9,60	0/0:16,0:5:7.82:0,8,55	1/1:9,6:14:14.97:72,15,0	0/0:21,0:20:53.99:0,54,535	0/0:18,0:17:44.90:0,45,398	1/1:11,9:14:26.45:135,26,0	0/0:19,0:17:44.42:0,44,470	1/1:7,0:6:15.30:64,15,0	1/1:18,3:17:22.03:138,22,0	1/1:13,4:16:20.15:142,20,0	1/1:17,0:15:26.47:83,26,0	1/1:13,2:12:24.22:103,24,0	0/0:20,0:20:50.36:0,50,476	0/0:13,0:11:27.07:0,27,263	1/1:15,4:12:24.89:105,25,0	1/1:9,1:8:18.99:97,19,0	0/0:29,0:27:73.31:0,73,603	0/0:25,0:22:57.93:0,58,452	0/0:17,0:15:33.57:0,34,284	1/1:11,1:8:17.83:71,18,0	1/1:13,3:15:23.64:105,24,0	1/1:11,1:6:10.42:53,10,0	1/1:13,1:13:12.02:71,12,0	1/1:20,1:18:10.84:88,11,0	0/0:20,0:17:44.93:0,45,426	0/1:6,0:5:6.83:27,0,7
chr10	48980380	.	T	TG	1267.62	PASS	AB=0.864;AC=26;AF=0.464;AN=56;BaseQRankSum=12.480;DP=493;FS=4.389;HRun=0;HaplotypeScore=125.2201;InbreedingCoeff=0.7747;MQ=33.28;MQ0=48;MQRankSum=-7.225;QD=5.84;ReadPosRankSum=6.680;VQSLOD=3.2110;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:38:73.09:0,73,624	0/0:11,0:10:23.90:0,24,226	0/0:8,0:1:2.90:0,3,16	0/0:15,0:4:5.18:0,5,54	1/1:12,6:17:9.83:78,10,0	0/0:21,0:20:53.21:0,53,537	0/0:17,0:16:41.88:0,42,366	1/1:13,9:16:36.36:208,36,0	0/0:19,0:17:44.90:0,45,493	1/1:7,0:6:17.05:87,17,0	1/1:18,3:17:14.91:127,15,0	0/1:14,4:17:3.11:111,0,3	1/1:17,0:15:21.23:127,21,0	1/1:13,2:12:22.03:118,22,0	0/0:21,0:21:53.78:0,54,493	0/0:14,0:12:29.58:0,30,299	1/1:15,4:12:16.50:143,16,0	0/1:9,1:8:7.88:57,0,8	0/0:31,0:29:77.19:0,77,619	0/0:25,0:22:57.23:0,57,466	0/0:16,0:14:36.12:0,36,302	1/1:11,2:9:4.47:67,4,0	1/1:14,3:16:8.48:48,8,0	0/0:13,1:6:11.85:0,12,50	1/1:12,1:12:5.93:56,6,0	1/1:20,1:18:31.76:208,32,0	0/0:20,0:16:41.97:0,42,402	1/1:6,0:5:5.90:43,6,0
chr10	48980666	.	AC	A	7599.06	PASS	AB=0.655;AC=16;AF=0.286;AN=56;BaseQRankSum=13.458;DP=814;FS=5.831;HRun=1;HaplotypeScore=149.6744;InbreedingCoeff=-0.1895;MQ=56.20;MQ0=8;MQRankSum=-10.288;QD=20.43;ReadPosRankSum=-1.400;VQSLOD=4.3247;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:75.73:0,76,1194	0/0:14,0:14:39.13:0,39,623	0/0:25,0:14:36.12:0,36,558	0/0:33,0:17:39.12:0,39,577	0/1:9,15:24:2.77:522,0,3	0/0:32,0:32:96.33:0,96,1532	0/0:33,0:33:99:0,99,1580	0/1:39,17:49:99:596,0,1027	0/0:58,0:58:99:0,172,2731	0/1:16,19:35:99:695,0,571	0/1:6,12:17:5.69:467,0,6	0/1:11,26:37:99:950,0,238	0/1:17,18:35:99:760,0,381	0/1:10,9:17:99:307,0,286	0/0:44,0:44:99:0,132,2084	0/0:37,0:37:99:0,111,1752	0/1:5,9:14:15.88:326,0,16	0/1:4,1:5:35.81:36,0,42	0/0:17,0:13:36.12:0,36,576	0/0:28,0:28:84.29:0,84,1343	0/0:62,0:61:99:0,184,2902	0/1:7,13:20:99:515,0,137	0/1:14,21:34:99:771,0,384	0/1:7,8:15:66.78:270,0,67	1/1:8,14:22:3.41:603,3,0	0/1:13,9:21:99:323,0,377	0/0:32,0:31:96.33:0,96,1526	0/1:4,11:15:76.25:458,0,76
chr10	48980704	.	A	AC	235.52	PASS	AB=0.855;AC=8;AF=0.143;AN=56;BaseQRankSum=5.637;DP=806;FS=1.918;HRun=0;HaplotypeScore=183.3724;InbreedingCoeff=-0.1578;MQ=56.77;MQ0=15;MQRankSum=-5.709;QD=1.61;ReadPosRankSum=-3.629;VQSLOD=2.3275;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:84.28:0,84,1171	0/0:15,0:15:42.12:0,42,568	0/0:24,0:18:54.18:0,54,754	0/0:36,0:27:72.24:0,72,997	0/1:6,6:12:99:125,0,108	0/0:37,0:37:99:0,111,1521	0/0:36,0:36:99:0,102,1427	0/0:65,1:63:99:0,169,2349	0/0:63,0:63:99:0,187,2550	0/1:27,2:28:13.36:13,0,951	0/1:12,2:12:17.50:18,0,323	0/1:25,0:31:65:65,0,870	0/0:24,0:25:45.37:0,45,970	0/1:15,1:14:5.66:6,0,501	0/0:46,0:46:99:0,138,1929	0/0:56,0:56:99:0,163,2249	0/0:5,0:5:13.24:0,13,149	0/0:4,0:4:12.04:0,12,168	0/0:25,0:23:69.21:0,69,933	0/0:39,0:39:99:0,111,1516	0/0:77,0:76:99:0,223,3098	0/1:13,0:16:16.53:17,0,498	0/0:22,0:24:38.96:0,39,825	0/0:10,0:10:14.06:0,14,173	0/1:9,3:12:99:116,0,224	0/1:15,1:16:3.17:3,0,509	0/0:36,0:35:99:0,105,1463	0/0:3,0:3:9.03:0,9,126
chr10	48980722	.	A	AC	10615.85	PASS	AB=0.577;AC=29;AF=0.518;AN=56;BaseQRankSum=17.043;DP=826;FS=36.784;HRun=0;HaplotypeScore=162.0141;InbreedingCoeff=0.9501;MQ=49.04;MQ0=35;MQRankSum=-15.836;QD=35.39;ReadPosRankSum=-2.536;VQSLOD=1.1642;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,99,1382	0/0:15,0:15:42.10:0,42,549	0/0:31,0:14:42.13:0,42,558	0/0:34,0:10:27:0,27,332	1/1:1,11:11:21:334,21,0	0/0:35,0:35:99:0,102,1411	0/0:37,0:37:99:0,105,1465	1/1:3,43:40:99:1649,108,0	0/0:66,0:66:99:0,196,2693	1/1:5,25:30:81.25:1244,81,0	1/1:3,14:15:39.13:622,39,0	1/1:6,24:30:13.53:1022,14,0	1/1:4,26:30:33.88:1105,34,0	1/1:6,19:24:57.18:884,57,0	0/0:46,0:46:99:0,132,1828	0/0:60,0:60:99:0,181,2518	1/1:2,8:10:24.05:334,24,0	1/1:1,8:9:21.07:335,21,0	0/0:22,0:16:48.16:0,48,672	0/0:46,0:46:99:0,129,1770	0/0:67,0:66:99:0,196,2720	0/1:4,11:15:0.80:486,0,1	1/1:3,19:21:54.10:858,54,0	1/1:2,10:12:15.59:204,16,0	1/1:1,13:14:30.10:478,30,0	1/1:2,17:20:57.15:870,57,0	0/0:33,0:32:99:0,99,1379	1/1:5,3:8:12.04:191,12,0
chr10	48980740	.	A	AC	6276.44	PASS	AB=0.702;AC=18;AF=0.321;AN=56;BaseQRankSum=15.203;DP=906;FS=0.326;HRun=0;HaplotypeScore=207.6200;InbreedingCoeff=0.0200;MQ=47.99;MQ0=36;MQRankSum=-15.824;QD=16.22;ReadPosRankSum=-4.959;VQSLOD=3.8531;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:81.27:0,81,1133	0/0:16,0:16:48.16:0,48,671	0/0:27,0:5:11.97:0,12,115	0/0:35,0:6:14.07:0,14,204	0/1:18,3:23:55.38:55,0,328	0/0:32,0:32:96.32:0,96,1340	0/0:37,0:37:99:0,105,1468	0/1:26,2:23:7.74:8,0,667	0/0:63,0:63:99:0,181,2502	0/1:24,14:44:99:752,0,511	0/1:9,7:19:99:201,0,230	0/1:6,20:31:44.16:892,0,44	0/1:13,20:38:76.32:971,0,76	0/1:17,12:37:99:562,0,453	0/0:58,0:58:99:0,175,2415	0/0:61,0:61:99:0,184,2507	0/1:8,2:12:99:180,0,182	0/1:11,3:15:99:111,0,246	0/0:11,0:8:24.08:0,24,336	0/0:48,0:48:99:0,135,1872	0/0:71,0:69:99:0,202,2808	1/1:2,19:25:12.30:718,12,0	1/1:2,11:14:33.08:478,33,0	1/1:2,11:17:25.25:318,25,0	0/1:18,5:27:99:209,0,463	0/1:23,9:36:99:421,0,702	0/0:32,0:31:96.32:0,96,1335	0/1:3,9:13:11.89:400,0,12
chr10	48980814	.	AC	A	6333.24	PASS	AB=0.791;AC=15;AF=0.268;AN=56;BaseQRankSum=5.582;DP=1339;FS=7.264;HRun=1;HaplotypeScore=393.2327;InbreedingCoeff=-0.3859;MQ=47.58;MQ0=71;MQRankSum=-4.836;QD=7.87;ReadPosRankSum=1.070;VQSLOD=1.7551;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:54.18:0,54,863	0/0:15,0:14:42.14:0,42,667	0/0:34,0:1:3.01:0,3,48	0/0:32,1:2:6.02:0,6,92	0/1:31,16:47:99:494,0,883	0/0:39,0:39:99:0,117,1865	0/0:43,0:39:99:0,114,1820	0/1:31,12:15:99:128,0,334	0/0:69,0:69:99:0,208,3275	0/1:68,24:90:99:704,0,2629	0/1:36,10:44:99:244,0,1019	0/1:53,11:64:99:366,0,1574	0/1:78,23:101:99:713,0,2325	0/1:69,18:86:99:495,0,2075	0/0:67,0:66:99:0,197,3097	0/0:58,0:58:99:0,175,2756	0/1:13,5:18:99:132,0,340	0/1:21,10:31:99:378,0,457	0/0:6,0:4:12.04:0,12,192	0/0:34,0:32:90.29:0,90,1410	0/0:73,1:70:99:0,208,3306	0/1:38,20:58:99:651,0,1290	0/1:32,8:38:99:274,0,640	0/1:38,13:51:99:256,0,853	0/1:24,16:40:99:604,0,746	0/1:41,25:65:99:838,0,1351	0/0:43,0:43:99:0,129,2058	0/1:18,3:21:56.56:57,0,738
chr10	48980833	.	AC	A	11946.71	PASS	AB=0.637;AC=15;AF=0.268;AN=56;BaseQRankSum=13.808;DP=1262;FS=12.085;HRun=1;HaplotypeScore=324.5507;InbreedingCoeff=-0.3486;MQ=51.64;MQ0=40;MQRankSum=-7.302;QD=16.90;ReadPosRankSum=4.263;VQSLOD=2.3259;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:54.14:0,54,809	0/0:13,0:12:36.12:0,36,575	0/0:24,0:8:18.06:0,18,285	0/0:44,0:23:60.16:0,60,899	0/1:21,19:40:99:605,0,452	0/0:39,0:39:99:0,117,1868	0/0:49,0:45:99:0,135,2133	0/1:16,1:6:39.14:39,0,147	0/0:65,0:65:99:0,196,3113	0/1:33,48:79:99:1751,0,1053	0/1:13,26:38:99:954,0,234	0/1:20,35:55:99:1061,0,475	0/1:33,65:98:99:1495,0,958	0/1:24,54:77:99:1399,0,567	0/0:65,0:64:99:0,193,2969	0/0:62,0:62:99:0,187,2947	0/1:3,15:18:23.44:249,0,23	0/1:10,21:31:99:415,0,222	0/0:12,0:10:30.10:0,30,478	0/0:32,0:30:90.31:0,90,1439	0/0:86,1:84:99:0,250,3885	0/1:25,20:45:99:715,0,741	0/1:13,31:41:99:535,0,248	0/1:14,36:50:99:535,0,237	0/1:19,12:31:99:450,0,598	0/1:27,37:63:99:1275,0,700	0/0:44,0:43:99:0,132,2047	0/1:3,13:16:8.83:469,0,9
chr10	48981061	.	C	CTTT	7871.42	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=8.055;DP=655;FS=6.215;HRun=12;HaplotypeScore=117.7956;InbreedingCoeff=0.9964;MQ=66.80;MQ0=1;MQRankSum=-5.783;QD=23.08;ReadPosRankSum=-4.069;VQSLOD=2.6832;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:84.17:0,84,942	0/0:15,0:16:19.48:0,19,368	0/0:18,0:16:18.34:0,18,182	0/0:15,0:14:18.73:0,19,150	1/1:5,4:24:38.06:515,38,0	0/0:23,0:23:50.86:0,51,555	0/0:17,0:17:37.33:0,37,424	1/1:11,4:22:40.01:560,40,0	0/0:18,0:18:35.93:0,36,394	1/1:13,9:26:36.07:566,36,0	1/1:6,5:27:59.58:853,60,0	1/1:7,2:25:37.55:416,38,0	1/1:19,1:36:75:850,75,0	1/1:11,1:19:42.71:561,43,0	0/0:30,0:30:65.94:0,66,711	0/0:22,0:25:47.74:0,48,481	1/1:11,1:17:36.59:555,37,0	1/1:12,2:18:27.56:412,28,0	0/0:21,0:22:31.41:0,31,367	0/0:45,0:47:97.38:0,97,1082	0/0:23,0:23:37.35:0,37,434	1/1:4,1:26:47.98:494,48,0	1/1:4,1:25:33.37:334,33,0	1/1:6,2:15:36.32:381,36,0	1/1:8,2:24:33.05:448,33,0	1/1:16,0:24:45.08:587,45,0	0/0:25,0:27:58.48:0,58,654	1/1:4,4:12:22.63:340,23,0
chr10	48982091	.	GTAGT	G	12414.92	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=18.020;DP=583;FS=1.895;HRun=0;HaplotypeScore=134.5163;InbreedingCoeff=0.9950;MQ=80.96;MQ0=1;MQRankSum=-17.375;QD=42.81;ReadPosRankSum=3.048;VQSLOD=4.9763;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:90.31:0,90,2367	0/0:7,0:7:18.06:0,18,472	0/0:24,0:24:57.18:0,57,1482	0/0:18,0:18:42.58:0,43,1029	1/1:2,28:30:69.24:1257,69,0	0/0:21,0:21:60.21:0,60,1583	0/0:18,0:18:51.18:0,51,1343	1/1:3,17:20:51.14:875,51,0	0/0:16,0:16:45.15:0,45,1188	1/1:0,29:29:87.30:1600,87,0	1/1:1,18:19:48.16:871,48,0	1/1:4,10:14:33.11:606,33,0	1/1:1,16:17:45.15:827,45,0	1/1:0,22:22:51.17:937,51,0	0/0:15,0:15:42.14:0,42,1107	0/0:20,0:20:57.20:0,57,1472	1/1:3,13:16:35.80:661,36,0	1/1:1,9:10:21.07:386,21,0	0/0:25,0:25:66.23:0,66,1692	0/0:23,0:23:66.23:0,66,1741	0/0:46,0:46:99:0,129,3403	1/1:2,20:22:54.19:987,54,0	1/1:1,20:21:45.05:820,45,0	1/1:2,11:13:15.01:275,15,0	1/1:4,26:29:69.24:1264,69,0	1/1:1,16:17:39.13:717,39,0	0/0:25,0:25:69.24:0,69,1798	1/1:2,8:10:18.06:331,18,0
chr10	48982194	.	TTTTTTTTTTTG	T	1858	PASS	AB=0.565;AC=27;AF=0.500;AN=54;BaseQRankSum=5.363;DP=374;FS=3.940;HRun=0;HaplotypeScore=115.4254;InbreedingCoeff=0.8890;MQ=56.39;MQ0=23;MQRankSum=-7.154;QD=12.90;ReadPosRankSum=3.746;VQSLOD=1.9587;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:38:99:0,103,4303	0/0:8,0:7:21.07:0,21,932	0/0:21,0:9:27.04:0,27,586	0/0:18,0:13:28.32:0,28,324	1/1:14,0:12:19.08:112,19,0	0/0:15,0:15:36.12:0,36,1765	0/0:11,0:10:27:0,27,876	0/1:3,10:11:99:174,0,144	0/0:9,0:9:27.08:0,27,979	1/1:11,0:11:29.68:207,30,0	1/1:15,0:15:35.22:219,35,0	1/1:9,0:9:23.53:144,24,0	1/1:12,0:12:29.42:181,29,0	1/1:11,0:11:32.22:188,32,0	0/0:19,0:19:54.19:0,54,2500	0/0:21,0:19:51.18:0,51,2233	1/1:7,0:5:11.87:82,12,0	1/1:8,0:6:11.83:77,12,0	0/0:27,0:24:72.20:0,72,3462	0/0:16,0:16:39.13:0,39,1871	0/0:3,0:3:9.03:0,9,410	1/1:9,0:9:26.21:154,26,0	1/1:9,0:7:17.45:97,17,0	./.	1/1:9,0:8:23.45:138,23,0	1/1:14,0:14:41.32:267,41,0	0/0:19,0:18:33.58:0,34,1403	1/1:3,0:3:5.90:37,6,0
chr10	48984765	.	T	TAGAG	25917.55	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=6.902;DP=833;FS=0.552;HRun=0;HaplotypeScore=158.3394;InbreedingCoeff=0.9996;MQ=77.55;MQ0=0;MQRankSum=-13.010;QD=61.42;ReadPosRankSum=0.064;VQSLOD=5.7078;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:68,0:68:99:0,199,3825	0/0:10,0:10:27.09:0,27,523	0/0:20,0:20:57.16:0,57,989	0/0:25,0:25:63.16:0,63,1087	1/1:4,25:29:51.17:1392,51,0	0/0:20,0:20:57.20:0,57,1105	0/0:31,0:31:84.29:0,84,1608	1/1:11,19:34:90.27:2123,90,0	0/0:30,0:30:90.31:0,90,1745	1/1:7,30:37:99:2666,102,0	1/1:5,14:20:36.12:984,36,0	1/1:8,30:39:93.32:2529,93,0	1/1:3,27:30:78.22:2067,78,0	1/1:10,32:44:96.33:2624,96,0	0/0:36,0:36:99:0,108,2061	0/0:43,0:43:99:0,126,2384	1/1:3,21:24:63.22:1701,63,0	1/1:3,16:19:51.18:1389,51,0	0/0:27,0:27:72.21:0,72,1353	0/0:27,0:27:75.26:0,75,1454	0/0:36,0:36:99:0,105,2024	1/1:4,17:21:33.08:901,33,0	1/1:3,13:18:27.09:737,27,0	1/1:2,30:33:75.26:2051,75,0	1/1:3,21:26:48.16:1312,48,0	1/1:4,30:35:99:2640,99,0	0/0:38,0:38:99:0,111,2107	1/1:3,9:12:30.10:800,30,0
chr10	48985325	.	TA	T	1697.89	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=8.521;DP=342;FS=1.801;HRun=12;HaplotypeScore=76.7842;InbreedingCoeff=0.8490;MQ=88.24;MQ0=4;MQRankSum=-5.522;QD=11.63;ReadPosRankSum=3.036;VQSLOD=3.6914;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:66.11:0,66,658	0/0:9,0:9:21.04:0,21,213	0/0:41,1:28:9.92:0,10,100	0/0:40,0:25:4.47:0,4,68	1/1:5,5:10:5.17:103,5,0	0/0:7,0:7:18.04:0,18,183	0/0:5,0:5:12.02:0,12,122	1/1:5,9:14:28.13:212,28,0	0/0:4,0:4:8.85:0,9,75	1/1:6,5:11:14.92:116,15,0	1/1:4,8:12:23.89:185,24,0	1/1:1,0:8:14.26:41,14,0	1/1:0,0:5:11.02:38,11,0	1/1:2,5:7:14.94:116,15,0	0/0:6,0:6:12:0,12,110	0/0:9,0:9:20.90:0,21,184	1/1:5,11:16:35.84:275,36,0	1/1:6,8:14:26.88:207,27,0	0/0:17,0:17:33.03:0,33,321	0/0:10,0:11:17.87:0,18,167	0/0:7,0:7:14.98:0,15,134	1/1:0,0:2:4.07:12,4,0	1/1:4,0:5:2.02:6,2,0	1/1:1,0:2:2.04:6,2,0	1/1:7,10:17:32.61:243,33,0	1/1:7,9:16:26.83:209,27,0	0/0:10,0:10:10.63:0,11,139	1/1:1,6:7:17.93:139,18,0
chr10	48985360	.	C	CAAAAG	8879.44	PASS	AC=36;AF=0.667;AN=54;BaseQRankSum=3.013;DP=270;FS=33.586;HRun=0;HaplotypeScore=74.1991;InbreedingCoeff=0.9262;MQ=77.23;MQ0=1;MQRankSum=-8.351;QD=58.04;ReadPosRankSum=-0.632;VQSLOD=2.9965;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:60.18:0,60,1139	0/0:8,0:8:15.05:0,15,294	0/0:20,0:19:22.08:0,22,293	0/0:19,0:16:22.25:0,22,316	1/1:3,5:8:15.05:340,15,0	0/0:11,0:11:30.10:0,30,588	0/0:14,0:14:39.13:0,39,764	1/1:12,9:24:36.05:911,36,0	0/0:3,0:3:9.03:0,9,176	1/1:1,5:6:15.05:443,15,0	1/1:2,6:8:21.03:505,21,0	1/1:1,5:6:18.06:496,18,0	1/1:2,3:6:12.04:352,12,0	1/1:3,3:7:15.01:374,15,0	0/0:6,0:6:18.06:0,18,353	0/0:9,0:9:27.08:0,27,495	1/1:7,4:11:19.23:401,19,0	1/1:4,5:11:24.08:666,24,0	1/1:3,7:9:24.08:686,24,0	1/1:2,6:10:24.08:651,24,0	1/1:0,9:10:27.09:710,27,0	1/1:0,2:2:6.02:177,6,0	1/1:0,2:3:6.02:177,6,0	./.	1/1:3,6:9:24.08:662,24,0	1/1:3,5:9:18.06:508,18,0	1/1:0,4:4:9.50:268,10,0	1/1:2,6:9:21.04:553,21,0
chr10	48986257	.	C	CA	1219.79	PASS	AB=0.800;AC=34;AF=0.895;AN=38;BaseQRankSum=-2.565;DP=175;FS=20.214;HRun=1;HaplotypeScore=37.7351;InbreedingCoeff=0.2671;MQ=56.09;MQ0=13;MQRankSum=-2.767;QD=10.25;ReadPosRankSum=1.991;VQSLOD=-0.2428;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,15:15:3.01:48,3,0	./.	0/0:13,0:5:18:0,18,207	0/1:7,0:2:4.83:5,0,21	./.	./.	1/1:2,12:13:2.35:44,2,0	1/1:0,3:3:9.03:140,9,0	./.	1/1:5,0:5:11.99:116,12,0	0/1:1,2:3:0:0,0,0	1/1:9,0:9:6.02:86,6,0	./.	1/1:1,2:3:2.62:37,3,0	1/1:0,6:6:0.89:2,1,0	./.	1/1:3,2:5:3.01:38,3,0	1/1:1,5:6:5.97:50,6,0	1/1:6,5:7:18.06:260,18,0	./.	1/1:0,5:5:3.01:48,3,0	1/1:1,0:1:3.01:37,3,0	./.	1/1:4,0:3:3.01:38,3,0	./.	1/1:1,6:6:15.05:221,15,0	1/1:12,1:13:5.47:75,5,0	1/1:2,0:2:6.02:77,6,0
chr10	48986338	.	ATGTC	A	2221.72	PASS	AC=24;AF=0.600;AN=40;BaseQRankSum=7.157;DP=369;FS=6.859;HRun=0;HaplotypeScore=79.5267;InbreedingCoeff=0.8096;MQ=68.67;MQ0=11;MQRankSum=-1.404;QD=13.89;ReadPosRankSum=2.239;VQSLOD=2.3722;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:60.16:0,60,1325	0/0:7,0:7:18.06:0,18,389	0/0:22,0:14:7.23:0,7,65	0/0:22,0:13:1.25:0,1,3	./.	0/0:12,0:12:24.08:0,24,539	0/0:21,0:21:30.10:0,30,679	./.	0/0:12,0:12:18.05:0,18,380	1/1:4,0:7:3:28,3,0	./.	1/1:8,0:12:12.48:112,12,0	1/1:3,0:5:6.01:56,6,0	1/1:2,0:7:15.02:140,15,0	0/0:16,0:16:27.09:0,27,617	1/1:9,10:17:33.11:497,33,0	1/1:8,0:10:3:28,3,0	1/1:11,0:14:8.70:83,9,0	1/1:22,5:24:21.07:328,21,0	1/1:9,3:11:18.06:278,18,0	1/1:4,13:17:33.11:508,33,0	./.	./.	1/1:11,0:12:6.01:56,6,0	./.	./.	1/1:10,7:16:18.06:272,18,0	./.
chr10	48987757	.	C	CCGGTGT	6790.70	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-5.097;DP=659;FS=26.231;HRun=0;HaplotypeScore=144.4560;InbreedingCoeff=0.9860;MQ=82.00;MQ0=0;MQRankSum=-13.260;QD=63.46;ReadPosRankSum=-0.622;VQSLOD=2.7596;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,144,3170	0/0:4,0:4:9.03:0,9,204	0/0:22,0:22:44.81:0,45,903	0/0:26,0:26:72.25:0,72,1516	0/0:20,0:20:51.17:0,51,1121	0/0:22,0:22:60.19:0,60,1311	0/0:28,0:28:81.26:0,81,1771	0/0:29,0:29:60.19:0,60,1295	0/0:21,0:21:63.22:0,63,1426	0/0:28,0:28:78.26:0,78,1684	0/0:15,0:15:45.15:0,45,1008	1/1:10,17:27:48.16:1622,48,0	1/1:7,17:24:60.21:2048,60,0	0/0:22,0:22:63.22:0,63,1423	0/0:25,0:25:60.16:0,60,1229	0/0:25,0:25:66.23:0,66,1494	0/0:28,0:28:78.27:0,78,1763	0/0:22,0:22:63.22:0,63,1415	0/0:16,0:16:36.08:0,36,736	0/0:22,0:22:54.17:0,54,1179	0/0:49,0:49:99:0,135,2976	1/1:3,9:12:27.09:919,27,0	1/1:3,13:16:39.13:1326,39,0	1/1:16,11:28:27.45:875,27,0	0/0:20,0:20:57.20:0,57,1289	0/0:30,0:30:81.28:0,81,1817	0/0:12,0:12:33.11:0,33,729	0/0:13,0:13:39.13:0,39,883
chr10	48989061	.	G	GTTCTTCTTCTTCTTC	11732.83	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=-4.086;DP=436;FS=24.271;HRun=0;HaplotypeScore=166.9344;InbreedingCoeff=0.6303;MQ=66.25;MQ0=3;MQRankSum=-7.595;QD=45.65;ReadPosRankSum=-0.774;VQSLOD=2.9202;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:63.17:0,63,2261	0/0:5,0:5:9.03:0,9,380	0/0:30,0:13:9.23:0,9,99	0/1:24,0:13:3.50:4,0,577	1/1:12,18:33:45.07:1802,45,0	0/0:19,0:19:48.15:0,48,1673	0/0:21,0:20:42.13:0,42,1317	0/1:34,0:33:23.92:1425,0,24	0/0:7,0:7:18.06:0,18,721	1/1:6,12:19:39.13:1437,39,0	1/1:5,15:19:23.99:833,24,0	0/0:6,0:5:11.99:0,12,199	0/1:11,0:11:13.75:14,0,92	1/1:11,0:11:24.08:1148,24,0	0/0:8,0:8:21.07:0,21,699	0/0:6,0:5:9.03:0,9,327	1/1:6,2:8:15.02:672,15,0	1/1:10,0:10:17.93:258,18,0	0/1:20,0:19:1.05:1,0,590	0/0:11,0:11:15.05:0,15,571	0/0:8,0:8:15.05:0,15,370	0/1:12,0:12:4.07:4,0,479	0/0:14,0:14:6.80:0,7,109	0/0:1,0:2:3:0,3,29	1/1:6,9:16:15.05:802,15,0	1/1:12,16:29:55.50:2803,56,0	0/0:13,0:13:27.08:0,27,917	1/1:8,1:9:21.01:532,21,0
chr10	48989070	.	CTTTTTTTTTTTTTTTGG	C	1533.57	PASS	AB=0.994;AC=15;AF=0.278;AN=54;BaseQRankSum=2.030;DP=472;FS=0.500;HRun=0;HaplotypeScore=198.8402;InbreedingCoeff=0.3125;MQ=52.39;MQ0=19;MQRankSum=1.057;QD=8.47;ReadPosRankSum=1.079;VQSLOD=2.7088;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:40:95.28:0,95,4016	0/0:4,0:6:15.94:0,16,859	0/1:23,0:7:11.63:12,0,359	0/0:23,0:12:22.84:0,23,425	0/0:33,0:30:58.10:0,58,2048	0/0:25,0:25:72.20:0,72,3785	0/0:21,0:20:54.03:0,54,1273	0/1:30,0:29:99:285,0,1219	0/0:12,0:12:27.08:0,27,1444	0/1:19,0:19:73.58:74,0,1345	0/0:19,0:18:21.87:0,22,1083	1/1:7,0:5:14.87:165,15,0	1/1:11,0:11:8.39:72,8,0	0/1:11,0:11:95.25:95,0,543	0/0:7,0:8:21.05:0,21,887	0/0:7,0:7:20.10:0,20,951	0/0:16,0:14:30.02:0,30,719	0/1:12,0:12:93.29:93,0,319	0/0:19,0:17:28.55:0,29,1269	0/0:19,0:17:38.96:0,39,1452	0/0:8,0:7:18.04:0,18,688	1/1:11,1:12:32.80:480,33,0	1/1:2,12:13:6.66:159,7,0	./.	0/0:14,0:14:27.09:0,27,1289	0/1:27,0:27:99:203,0,1561	0/0:14,0:13:36.06:0,36,1325	0/1:12,0:11:67.43:67,0,404
chr10	48989105	.	TTTTTTTC	T	1512.39	PASS	AB=0.971;AC=13;AF=0.232;AN=56;BaseQRankSum=7.887;DP=397;FS=31.680;HRun=0;HaplotypeScore=94.5659;InbreedingCoeff=0.1042;MQ=36.86;MQ0=36;MQRankSum=-3.708;QD=9.00;ReadPosRankSum=6.541;VQSLOD=0.0079;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:40:92.82:0,93,1743	0/0:8,0:7:18.06:0,18,430	0/0:3,0:2:6.01:0,6,81	0/0:5,0:1:3.01:0,3,55	0/1:25,1:22:35.23:121,0,35	0/0:23,0:22:66.15:0,66,1551	0/0:14,0:11:21.04:0,21,455	0/1:22,0:17:4.90:192,0,5	0/0:18,0:15:39.06:0,39,723	0/1:15,2:15:25.93:278,0,26	1/1:15,2:14:25.74:278,26,0	0/0:8,0:7:19.78:0,20,202	0/0:7,0:7:17.88:0,18,223	0/1:8,0:8:14.75:179,0,15	0/0:6,0:6:15.01:0,15,348	0/0:11,0:9:24.07:0,24,528	0/1:17,0:8:47.70:86,0,48	1/1:10,0:5:6.02:68,6,0	0/0:17,0:15:45.14:0,45,882	0/0:19,0:19:48.39:0,48,940	0/0:6,0:4:9.02:0,9,190	0/0:11,0:10:6.23:0,6,268	0/1:11,0:11:8.77:9,0,123	0/0:9,0:7:14.98:0,15,162	0/1:9,0:8:41.35:41,0,67	0/1:16,1:15:4.30:245,0,4	0/0:20,0:19:48.58:0,49,952	0/1:13,1:12:37.60:174,0,38
chr10	48989106	.	TTTTTTC	T	2134.16	PASS	AB=0.903;AC=19;AF=0.339;AN=56;BaseQRankSum=6.768;DP=370;FS=33.158;HRun=0;HaplotypeScore=77.3186;InbreedingCoeff=0.6656;MQ=37.58;MQ0=37;MQRankSum=-3.765;QD=15.69;ReadPosRankSum=6.392;VQSLOD=1.0291;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:39:90.14:0,90,1422	0/0:9,0:8:21.06:0,21,383	0/0:2,0:1:3.01:0,3,42	0/0:5,0:1:3.01:0,3,44	1/1:10,5:11:14.48:206,14,0	0/0:23,0:22:63.14:0,63,1276	0/0:14,0:11:21.03:0,21,380	1/1:7,10:13:29.61:373,30,0	0/0:18,0:15:36.97:0,37,588	1/1:11,4:13:12.64:423,13,0	1/1:13,1:10:26.95:311,27,0	0/0:8,0:7:19.51:0,20,178	0/0:7,0:7:17.82:0,18,179	1/1:7,1:8:2.73:146,3,0	0/0:7,0:7:15.04:0,15,310	0/0:11,0:9:24.07:0,24,427	0/1:10,7:9:25.66:164,0,26	1/1:5,5:5:6.02:118,6,0	0/0:18,0:16:48.11:0,48,753	0/0:20,0:20:50.33:0,50,797	0/0:6,0:4:9.02:0,9,162	0/0:12,0:11:15.19:0,15,254	0/1:9,0:9:3.55:4,0,88	0/0:11,0:9:20.84:0,21,175	0/1:8,0:7:8.04:62,0,8	1/1:9,1:8:13.22:305,13,0	0/0:20,0:19:48.47:0,48,787	1/1:7,6:11:11.62:214,12,0
chr10	48989107	.	TTTTTC	T	1977.17	PASS	AB=1.000;AC=20;AF=0.357;AN=56;BaseQRankSum=8.222;DP=365;FS=24.664;HRun=0;HaplotypeScore=69.9474;InbreedingCoeff=0.7622;MQ=38.14;MQ0=35;MQRankSum=-1.980;QD=15.09;ReadPosRankSum=5.071;VQSLOD=0.7829;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:39:89.51:0,90,1140	0/0:9,0:8:21.05:0,21,307	0/0:2,0:1:3.01:0,3,31	0/0:5,0:1:3.01:0,3,32	1/1:13,1:11:14.67:182,15,0	0/0:22,0:21:60.12:0,60,1002	0/0:14,0:11:20.87:0,21,299	1/1:15,2:13:29.68:354,30,0	0/0:18,0:15:35.84:0,36,464	1/1:14,2:14:31.85:393,32,0	1/1:12,2:10:26.92:286,27,0	0/0:9,0:8:22.03:0,22,144	0/0:7,0:7:17.74:0,18,132	1/1:9,0:9:6.25:160,6,0	0/0:6,0:6:15.04:0,15,265	0/0:11,0:9:24:0,24,327	0/1:15,0:7:19.66:114,0,20	1/1:9,0:5:6.02:85,6,0	0/0:20,0:18:50.95:0,51,624	0/0:20,0:20:43.64:0,44,635	0/0:6,0:4:9.02:0,9,133	0/0:12,0:11:11.86:0,12,189	0/1:6,0:6:2.05:2,0,73	0/0:11,0:9:20.84:0,21,161	1/1:8,0:7:14.61:141,15,0	1/1:10,2:10:19.13:293,19,0	0/0:19,0:18:42.51:0,43,607	1/1:10,1:9:12.04:167,12,0
chr10	48989244	.	T	TA	983.73	PASS	AB=0.763;AC=10;AF=0.179;AN=56;BaseQRankSum=-6.242;DP=557;FS=3.427;HRun=12;HaplotypeScore=69.5930;InbreedingCoeff=0.5426;MQ=72.36;MQ0=0;MQRankSum=2.005;QD=7.75;ReadPosRankSum=1.185;VQSLOD=2.6456;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:39:97.31:0,97,695	0/0:9,0:9:20.86:0,21,151	0/1:17,0:16:8.42:8,0,71	0/0:8,0:9:10.09:0,10,49	0/0:12,0:13:21.99:0,22,155	0/0:26,0:26:65.48:0,65,474	0/0:18,0:18:38.74:0,39,282	0/0:25,0:26:46.69:0,47,332	0/0:23,1:24:27.46:0,27,365	0/0:22,1:24:11.51:0,12,239	0/0:11,0:11:2.89:0,3,22	0/1:5,13:18:36.68:148,0,37	1/1:3,12:15:24.04:234,24,0	0/0:21,0:21:35.64:0,36,260	0/0:23,1:25:29.39:0,29,361	0/0:12,0:13:34.74:0,35,238	0/0:25,1:26:65.27:0,65,477	0/0:25,0:25:68.52:0,69,495	0/0:22,1:24:26.16:0,26,331	0/1:21,2:23:2.24:2,0,296	0/0:20,1:22:19.63:0,20,289	1/1:5,14:19:18.11:303,18,0	1/1:3,16:19:17.95:176,18,0	0/1:3,12:16:4.92:267,0,5	0/0:25,0:25:56.62:0,57,415	0/0:16,0:16:17.80:0,18,131	0/0:22,0:24:58.62:0,59,417	0/0:10,0:10:29.78:0,30,213
chr10	48989621	.	GGAAGTCA	G	10583.98	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=17.485;DP=603;FS=8.536;HRun=0;HaplotypeScore=187.4145;InbreedingCoeff=0.9979;MQ=70.98;MQ0=0;MQRankSum=-14.593;QD=52.14;ReadPosRankSum=1.298;VQSLOD=4.1195;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,117,4467	0/0:13,0:13:36.12:0,36,1446	0/0:36,0:36:99:0,105,3591	0/0:24,0:24:72.18:0,72,2667	1/1:4,18:22:24.08:623,24,0	0/0:24,0:24:72.23:0,72,2775	0/0:24,0:24:72.22:0,72,2704	1/1:4,31:35:84.62:1702,85,0	0/0:18,0:18:54.19:0,54,2101	1/1:3,26:29:78.25:1968,78,0	1/1:2,12:13:18.06:468,18,0	0/0:15,0:15:42.14:0,42,1621	0/0:21,0:21:63.22:0,63,2533	1/1:0,20:20:60.21:1557,60,0	0/0:24,0:24:66.23:0,66,2603	0/0:12,0:12:36.12:0,36,1450	1/1:3,17:20:30.10:779,30,0	1/1:0,15:15:30.10:775,30,0	0/0:18,0:18:54.19:0,54,2113	0/0:16,0:16:42.10:0,42,1491	0/0:31,0:31:93.32:0,93,3722	0/0:21,0:21:63.22:0,63,2448	0/0:25,0:25:72.25:0,72,2806	0/0:15,0:15:42.14:0,42,1664	1/1:2,16:18:42.14:1092,42,0	1/1:3,16:19:47.58:1054,48,0	0/0:24,0:24:72.24:0,72,2777	1/1:4,7:11:23.52:565,24,0
chr10	48989852	.	AC	A	7263.05	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=15.419;DP=627;FS=8.096;HRun=2;HaplotypeScore=78.0252;InbreedingCoeff=0.9987;MQ=74.95;MQ0=0;MQRankSum=-4.781;QD=33.63;ReadPosRankSum=0.805;VQSLOD=4.6356;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,111,1633	0/0:6,0:6:18.06:0,18,267	0/0:23,0:20:60.11:0,60,776	0/0:25,0:24:56.55:0,57,789	1/1:0,19:19:42.14:545,42,0	0/0:20,0:20:60.19:0,60,879	0/0:25,0:25:75.25:0,75,1124	1/1:1,28:29:84.23:1067,84,0	0/0:21,0:21:63.21:0,63,944	1/1:0,15:15:45.10:562,45,0	1/1:1,17:18:45.14:562,45,0	0/0:23,0:23:69.23:0,69,1034	0/0:18,0:18:48.16:0,48,719	1/1:0,26:26:66.21:852,66,0	0/0:28,0:28:81.27:0,81,1211	0/0:16,0:16:48.16:0,48,720	1/1:0,28:27:69.22:896,69,0	1/1:0,36:35:99:1285,99,0	0/0:21,0:21:63.20:0,63,917	0/0:11,0:11:33.11:0,33,489	0/0:41,0:41:99:0,114,1664	0/0:18,0:18:45.15:0,45,673	0/0:18,0:18:48.16:0,48,719	0/0:29,0:29:78.26:0,78,1169	1/1:1,13:14:33.11:424,33,0	1/1:0,14:14:42.09:526,42,0	0/0:29,0:29:84.28:0,84,1248	1/1:0,17:17:42.14:545,42,0
chr10	48989918	.	CT	C	1770.58	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-1.009;DP=510;FS=1.187;HRun=6;HaplotypeScore=84.6268;InbreedingCoeff=0.9676;MQ=67.08;MQ0=1;MQRankSum=3.931;QD=22.13;ReadPosRankSum=2.558;VQSLOD=2.9877;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:75.23:0,75,971	0/0:6,0:6:15.05:0,15,195	0/0:25,0:18:33.11:0,33,426	0/0:13,0:12:6.08:0,6,164	0/0:22,0:21:42.01:0,42,492	0/0:17,0:17:44.73:0,45,557	0/0:18,0:18:47.52:0,48,600	0/0:38,0:38:90.18:0,90,1131	0/0:17,0:14:39.13:0,39,513	0/0:29,0:29:75.24:0,75,986	0/0:16,0:16:45.08:0,45,548	1/1:2,9:11:27.07:290,27,0	1/1:2,8:9:18.04:193,18,0	0/0:11,0:11:26.59:0,27,286	0/0:21,0:21:59.81:0,60,733	0/0:10,0:10:27.09:0,27,355	0/0:17,0:16:36.10:0,36,459	0/0:20,0:19:42.14:0,42,552	0/0:17,0:17:44.85:0,45,545	0/0:11,0:11:30.05:0,30,374	0/0:19,0:19:42.12:0,42,535	1/1:1,11:12:30.01:308,30,0	1/1:1,21:22:57.14:611,57,0	1/1:3,22:25:17.67:541,18,0	0/0:15,0:15:39.13:0,39,507	0/0:20,0:20:54.18:0,54,709	0/0:23,0:21:60.07:0,60,726	0/0:17,0:17:45.11:0,45,571
chr10	48989991	.	CCCGGTTT	C	3171.12	PASS	AB=0.700;AC=27;AF=0.482;AN=56;BaseQRankSum=9.478;DP=386;FS=36.682;HRun=0;HaplotypeScore=92.4599;InbreedingCoeff=0.8248;MQ=54.32;MQ0=6;MQRankSum=-9.386;QD=21.43;ReadPosRankSum=-2.567;VQSLOD=0.8957;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:72.20:0,72,2638	0/0:7,0:7:18.06:0,18,674	0/0:19,0:10:23.65:0,24,947	0/0:16,0:14:41.97:0,42,1344	1/1:5,4:5:3.01:60,3,0	0/0:9,0:9:24.08:0,24,823	0/0:15,0:15:42.13:0,42,1471	1/1:9,11:17:32.97:642,33,0	0/0:22,0:20:51.18:0,51,1932	1/1:2,5:6:12.04:292,12,0	1/1:2,6:7:9.03:219,9,0	0/0:23,0:22:61.45:0,61,2275	0/0:15,0:14:36.12:0,36,1309	1/1:2,3:5:3.01:73,3,0	0/0:23,0:23:54.18:0,54,2039	0/0:23,0:23:66.23:0,66,2474	0/1:4,3:5:0:0,0,0	1/1:4,5:8:3.01:73,3,0	1/1:7,6:11:15.05:365,15,0	1/1:3,13:16:24.08:582,24,0	1/1:1,9:10:9.03:212,9,0	0/0:13,0:13:39.09:0,39,1226	0/0:13,0:13:21.07:0,21,708	0/0:11,0:11:33.10:0,33,1143	1/1:3,2:4:3.01:73,3,0	1/1:5,4:9:11.39:180,11,0	1/1:8,15:21:23.58:581,24,0	1/1:6,1:6:2.98:21,3,0
chr10	48990108	.	T	TG	1516.32	PASS	AB=0.604;AC=13;AF=0.260;AN=50;BaseQRankSum=2.819;DP=355;FS=8.796;HRun=4;HaplotypeScore=39.4818;InbreedingCoeff=0.6755;MQ=41.99;MQ0=34;MQRankSum=-8.398;QD=18.95;ReadPosRankSum=-4.093;VQSLOD=1.4192;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:20:48.12:0,48,533	0/0:8,0:5:15.04:0,15,170	./.	./.	0/1:7,12:17:1.07:326,0,1	0/0:13,0:11:24.07:0,24,272	0/0:19,0:16:45.13:0,45,510	1/1:2,7:7:21.07:287,21,0	0/0:22,0:19:48.11:0,48,532	1/1:5,9:10:27.08:353,27,0	1/1:1,5:6:15.01:184,15,0	0/0:20,0:17:42.12:0,42,476	0/0:10,0:8:21.04:0,21,228	0/1:2,5:7:18.93:132,0,19	0/0:12,0:11:33.08:0,33,365	0/0:7,0:7:18.05:0,18,204	./.	0/0:3,1:3:3.01:0,3,34	0/0:8,0:6:15.01:0,15,157	0/0:10,0:10:24.07:0,24,272	0/0:22,0:17:33.09:0,33,374	0/0:11,0:11:20.99:0,21,222	0/0:14,0:11:24.07:0,24,270	0/0:19,0:18:45.10:0,45,491	1/1:2,7:9:11.95:140,12,0	0/1:3,5:8:49.97:146,0,50	0/0:12,0:8:15:0,15,156	1/1:4,3:5:9.03:121,9,0
chr10	48990232	.	ACCCCCC	A	2951.67	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-0.927;DP=311;FS=7.150;HRun=12;HaplotypeScore=87.6250;InbreedingCoeff=0.9280;MQ=71.70;MQ0=1;MQRankSum=-9.662;QD=32.80;ReadPosRankSum=3.268;VQSLOD=2.0789;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:21.07:0,21,523	0/0:3,0:3:9.03:0,9,257	0/0:11,0:12:26.13:0,26,566	0/0:15,0:11:17.94:0,18,302	1/1:1,5:6:9.03:181,9,0	0/0:6,0:7:15.03:0,15,290	0/0:13,0:15:30.99:0,31,811	1/1:6,6:12:14.96:199,15,0	0/0:4,0:5:11.91:0,12,322	1/1:3,6:9:18.04:363,18,0	1/1:1,7:8:21.06:424,21,0	0/0:14,0:14:11.28:0,11,607	0/0:18,0:18:39.60:0,40,710	1/1:2,6:8:18.05:363,18,0	0/0:12,0:12:33.11:0,33,929	0/0:9,0:9:17.38:0,17,474	1/1:4,4:8:9.01:182,9,0	1/1:5,2:7:5.96:121,6,0	0/0:3,0:12:33.10:0,33,536	0/0:5,0:6:15.03:0,15,192	0/0:10,0:22:45.15:0,45,760	0/0:12,0:12:36.12:0,36,646	0/0:13,0:13:36.12:0,36,689	0/0:25,0:25:57.15:0,57,1026	1/1:0,11:11:30.10:605,30,0	1/1:5,11:16:24.03:484,24,0	0/0:5,0:6:18.02:0,18,265	1/1:0,5:5:12.04:242,12,0
chr10	48990340	.	TCACACACA	T	487.83	PASS	AB=1.000;AC=12;AF=0.222;AN=54;BaseQRankSum=4.776;DP=479;FS=0.000;HRun=0;HaplotypeScore=132.4169;InbreedingCoeff=0.3326;MQ=63.75;MQ0=17;MQRankSum=-5.365;QD=4.56;ReadPosRankSum=-1.777;VQSLOD=2.0695;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:18.04:0,18,535	0/0:10,0:10:12.93:0,13,307	./.	0/0:44,0:19:0.89:0,1,2	0/0:16,0:15:8.93:0,9,67	0/0:14,0:15:18.04:0,18,586	0/0:18,0:19:21.07:0,21,689	0/0:17,0:15:2.98:0,3,22	0/0:12,0:12:9.01:0,9,269	0/0:17,0:15:0:0,0,0	0/0:12,0:12:8.91:0,9,65	0/1:9,0:9:3.22:3,0,42	0/0:12,0:12:12:0,12,197	1/1:13,0:13:5.93:71,6,0	0/0:19,0:20:15.03:0,15,376	0/0:12,0:13:18.03:0,18,398	0/1:14,0:14:10.89:125,0,11	0/1:16,0:15:49.71:50,0,53	1/1:17,0:15:2.70:71,3,0	0/0:10,0:10:3.01:0,3,34	0/0:28,0:28:11.70:0,12,80	0/0:18,0:18:5.58:0,6,224	0/0:5,0:5:9.02:0,9,153	0/0:27,0:26:26.93:0,27,332	1/1:10,0:10:3.01:56,3,0	0/1:16,0:15:46.96:47,0,101	1/1:6,5:11:9.03:205,9,0	0/0:6,0:5:5.93:0,6,41
chr10	48990384	.	ACACACAC	A	693.13	PASS	AB=0.949;AC=19;AF=0.339;AN=56;BaseQRankSum=8.935;DP=475;FS=8.935;HRun=0;HaplotypeScore=131.6544;InbreedingCoeff=0.4771;MQ=57.58;MQ0=15;MQRankSum=-0.933;QD=4.25;ReadPosRankSum=0.283;VQSLOD=2.1116;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:72.71:0,73,1585	0/0:5,0:5:12.04:0,12,341	0/0:30,0:8:22.61:0,23,253	0/0:25,0:12:28.62:0,29,343	1/1:11,2:13:0.44:20,0,0	0/0:23,0:23:54.17:0,54,1160	0/0:21,0:21:45.13:0,45,1081	1/1:21,0:20:23.34:136,23,0	0/0:7,0:7:18.06:0,18,413	1/1:16,0:15:11.80:71,12,0	0/1:11,1:12:12.78:30,0,13	0/0:12,0:12:15.45:0,15,201	0/0:18,0:18:15.04:0,15,252	1/1:12,0:12:9.89:88,10,0	0/0:20,0:20:48.16:0,48,936	0/0:11,0:11:27.09:0,27,557	0/1:13,2:13:5.52:117,0,6	1/1:17,1:17:0.50:74,1,0	0/1:14,0:13:2.87:3,0,417	0/0:10,0:10:12.04:0,12,159	0/0:38,0:36:79.12:0,79,997	0/0:16,0:16:5.77:0,6,222	0/0:9,0:9:9.02:0,9,155	0/0:33,0:32:68.17:0,68,835	1/1:5,1:6:2.23:53,2,0	1/1:18,1:19:24.14:184,24,0	0/1:12,0:11:75.16:75,0,179	0/1:4,0:4:17.97:18,0,73
chr10	48990388	.	ACACG	A	3018	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=10.540;DP=457;FS=2.057;HRun=0;HaplotypeScore=99.2735;InbreedingCoeff=0.7584;MQ=61.49;MQ0=13;MQRankSum=-3.391;QD=14.17;ReadPosRankSum=0.440;VQSLOD=3.1264;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:45.05:0,45,699	0/0:5,0:5:2.98:0,3,22	0/0:31,0:9:16.92:0,17,141	0/0:27,0:14:14.72:0,15,225	1/1:10,0:10:2.88:15,3,0	0/0:25,0:25:23.77:0,24,549	0/0:21,0:21:38.81:0,39,408	1/1:24,0:23:62.83:531,63,0	0/0:8,0:8:20.73:0,21,259	1/1:17,0:16:44.82:363,45,0	1/1:10,0:10:8.99:75,9,0	1/1:10,1:11:22.99:214,23,0	1/1:3,14:17:5.74:73,6,0	1/1:12,0:12:26.88:237,27,0	0/0:20,0:20:16.67:0,17,358	0/0:11,0:11:26.89:0,27,266	1/1:16,0:14:26.60:223,27,0	1/1:13,0:13:32.07:257,32,0	0/0:16,0:14:4.86:0,5,268	0/0:11,0:11:11.92:0,12,89	0/0:32,0:30:63.03:0,63,479	1/1:7,7:14:6.02:96,6,0	1/1:1,6:7:2.68:58,3,0	1/1:26,4:29:62.14:625,62,0	1/1:5,0:5:8.96:72,9,0	1/1:15,0:15:41.91:367,42,0	0/1:12,0:12:20.23:20,0,105	0/0:2,0:2:2.50:0,2,9
chr10	48990392	.	GC	G	512.31	PASS	AB=0.944;AC=24;AF=0.444;AN=54;BaseQRankSum=9.720;DP=430;FS=9.884;HRun=1;HaplotypeScore=91.0127;InbreedingCoeff=0.7572;MQ=63.72;MQ0=11;MQRankSum=-1.561;QD=3.33;ReadPosRankSum=0.935;VQSLOD=-0.6718;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:78.11:0,78,1164	./.	0/0:32,0:10:27.56:0,28,396	0/0:27,0:14:32.73:0,33,499	1/1:10,2:12:0.34:3,0,0	0/0:21,0:21:54.10:0,54,820	0/0:15,0:15:33.04:0,33,497	1/1:24,0:24:37.53:214,38,0	0/0:9,0:9:24.06:0,24,357	1/1:17,0:16:19.91:107,20,0	1/1:9,1:10:7.48:28,7,0	0/0:12,0:12:16.55:0,17,127	0/1:14,0:14:0.42:0,0,22	1/1:10,2:12:12.11:73,12,0	0/0:18,0:18:48.11:0,48,712	0/0:11,0:11:24.01:0,24,344	0/1:14,2:15:0.02:41,0,0	1/1:11,2:13:8.56:49,9,0	0/0:17,0:16:43.65:0,44,712	0/0:12,0:12:15.04:0,15,216	0/0:30,0:29:66.22:0,66,1043	1/1:8,0:8:3.11:9,3,0	1/1:6,0:6:1.78:5,2,0	0/0:28,0:28:39.61:0,40,287	1/1:4,1:5:2.88:15,3,0	1/1:14,1:15:26.26:145,26,0	0/0:13,0:13:29.84:0,30,365	1/1:2,0:2:1.82:5,2,0
chr10	48990514	.	A	AC	4928.76	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=16.108;DP=552;FS=3.952;HRun=0;HaplotypeScore=88.8862;InbreedingCoeff=0.9955;MQ=72.12;MQ0=1;MQRankSum=-12.380;QD=33.53;ReadPosRankSum=-2.807;VQSLOD=3.6489;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,102,1387	0/0:5,0:5:15.05:0,15,200	0/0:30,0:26:30.63:0,31,682	0/0:19,0:16:33.12:0,33,434	1/1:2,12:13:32.98:418,33,0	0/0:32,0:32:96.28:0,96,1279	0/0:21,0:21:63.16:0,63,795	1/1:3,24:27:75.18:1041,75,0	0/0:26,0:26:72.19:0,72,923	1/1:5,10:14:38.99:480,39,0	1/1:1,7:8:18.06:255,18,0	0/0:22,0:22:66.16:0,66,868	0/0:21,0:21:57.14:0,57,761	1/1:1,8:9:24.08:329,24,0	0/0:32,0:32:93.31:0,93,1290	0/0:24,0:24:72.21:0,72,946	1/1:3,12:15:39.01:509,39,0	1/1:4,8:12:26.96:331,27,0	0/0:24,0:24:72.18:0,72,932	0/0:22,0:22:66.22:0,66,904	0/0:13,0:13:36.06:0,36,458	0/0:23,0:23:57.09:0,57,720	0/0:19,0:19:54.04:0,54,674	0/0:17,0:17:45.14:0,45,604	1/1:1,15:16:39.04:526,39,0	1/1:0,21:20:54.11:727,54,0	0/0:21,0:21:63.17:0,63,806	1/1:1,9:10:24.06:312,24,0
chr10	48990522	.	AAG	A	2716.10	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=12.795;DP=545;FS=0.456;HRun=0;HaplotypeScore=99.3591;InbreedingCoeff=0.9338;MQ=69.56;MQ0=3;MQRankSum=-11.503;QD=20.12;ReadPosRankSum=-1.119;VQSLOD=3.6896;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:63.22:0,63,1039	0/0:5,0:5:15.05:0,15,247	0/0:37,0:28:57.10:0,57,799	0/0:22,1:19:0.75:0,1,398	1/1:3,12:14:27.04:319,27,0	0/0:35,0:35:84.29:0,84,1372	0/0:21,0:21:54.18:0,54,888	1/1:15,11:26:30.09:365,30,0	0/0:27,0:27:72.25:0,72,1188	1/1:4,11:14:30.09:365,30,0	1/1:2,5:7:9.03:112,9,0	0/0:21,0:21:54.18:0,54,883	0/0:21,0:21:54.16:0,54,887	1/1:3,6:9:15.05:187,15,0	0/0:33,0:33:47.28:0,47,1124	0/0:23,0:23:57.19:0,57,931	1/1:4,9:13:27.04:320,27,0	1/1:2,9:11:24.08:300,24,0	0/0:22,0:22:57.13:0,57,861	0/0:20,1:21:19.74:0,20,836	0/0:13,0:13:39.13:0,39,644	0/0:20,0:20:56.98:0,57,899	0/0:19,0:19:45.12:0,45,688	0/0:17,0:17:42.13:0,42,668	1/1:4,8:12:24.08:300,24,0	1/1:3,19:21:48.14:587,48,0	0/0:19,1:18:54.17:0,54,851	1/1:3,2:5:6.02:75,6,0
chr10	48990745	.	GGC	G	507.56	PASS	AB=0.749;AC=10;AF=0.179;AN=56;BaseQRankSum=10.964;DP=663;FS=8.797;HRun=0;HaplotypeScore=134.7016;InbreedingCoeff=-0.2347;MQ=54.12;MQ0=18;MQRankSum=-9.428;QD=2.55;ReadPosRankSum=1.416;VQSLOD=1.9122;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,120,2184	0/0:10,0:10:30.10:0,30,594	0/0:18,0:5:12.04:0,12,214	0/0:24,0:12:8.07:0,8,499	0/0:11,11:22:9.98:0,10,79	0/0:23,0:23:66.23:0,66,1320	0/0:34,0:34:99:0,102,1936	0/0:6,0:5:11.50:0,12,148	0/0:28,0:28:81.23:0,81,1589	0/1:12,6:18:85.99:86,0,231	0/1:9,5:14:46:46,0,89	0/1:14,0:22:10.99:11,0,60	0/1:12,0:18:8.02:8,0,225	0/1:17,11:27:91.18:91,0,481	0/0:31,0:31:90.30:0,90,1788	0/0:27,0:27:81.23:0,81,1574	0/1:17,7:24:70.28:70,0,346	0/1:19,1:20:20.71:21,0,323	0/0:20,0:15:45.14:0,45,866	0/0:14,0:14:39.13:0,39,791	0/0:86,0:82:99:0,226,4350	0/0:14,0:21:2.07:0,2,265	0/0:4,0:6:9.01:0,9,127	0/0:14,0:19:17.46:0,17,210	0/1:13,10:23:99:161,0,281	0/1:14,4:18:91.27:91,0,299	0/0:25,0:24:69.24:0,69,1389	0/1:4,6:10:62.88:63,0,99
chr10	48990746	.	GCAGT	G	1417.69	PASS	AB=0.924;AC=13;AF=0.232;AN=56;BaseQRankSum=11.968;DP=654;FS=12.593;HRun=0;HaplotypeScore=151.2252;InbreedingCoeff=-0.1180;MQ=53.98;MQ0=18;MQRankSum=-10.879;QD=6.06;ReadPosRankSum=0.626;VQSLOD=2.2122;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,111,3032	0/0:10,0:10:30.10:0,30,843	0/0:18,0:5:12.04:0,12,193	0/0:23,0:11:33.11:0,33,727	0/0:21,0:21:10.58:0,11,156	0/0:23,0:23:66.21:0,66,1794	0/0:34,0:34:99:0,99,2650	0/0:7,0:6:18.05:0,18,379	0/0:30,0:30:84.29:0,84,2354	0/1:16,0:16:83.12:83,0,426	0/1:13,0:13:32.22:32,0,241	1/1:12,11:22:20.40:537,20,0	0/1:13,6:17:99:143,0,103	0/1:28,0:27:99:105,0,1141	0/0:31,0:31:87.30:0,87,2440	0/0:27,0:27:78.25:0,78,2041	0/1:24,1:24:79.01:79,0,851	0/1:17,3:20:99:129,0,628	0/0:20,0:15:42.13:0,42,1151	0/0:13,0:13:39.13:0,39,1130	0/0:84,0:80:99:0,220,6019	0/1:15,4:19:77.59:78,0,151	0/0:5,1:6:6:0,6,60	0/1:14,7:19:82.28:82,0,93	0/1:23,0:23:99:179,0,704	0/1:17,0:17:63.38:63,0,577	0/0:25,0:24:69.23:0,69,1897	0/1:10,0:10:66.76:67,0,219
chr10	48990748	.	AGTG	A	1022.21	PASS	AB=0.827;AC=11;AF=0.196;AN=56;BaseQRankSum=11.686;DP=654;FS=8.092;HRun=0;HaplotypeScore=142.7801;InbreedingCoeff=-0.2066;MQ=53.84;MQ0=19;MQRankSum=-9.355;QD=4.73;ReadPosRankSum=0.108;VQSLOD=2.2788;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:46:99:0,108,2654	0/0:10,0:10:30.10:0,30,695	0/0:17,0:4:9.03:0,9,144	0/0:22,0:10:30.10:0,30,662	0/0:11,11:22:0.14:0,0,103	0/0:23,0:23:66.21:0,66,1571	0/0:37,0:37:99:0,108,2534	0/0:7,0:6:11.24:0,11,323	0/0:32,0:32:90.31:0,90,2173	0/1:10,6:16:99:147,0,308	0/1:11,5:16:41.33:41,0,216	0/1:22,0:21:8.28:83,0,8	0/1:19,0:17:83.38:86,0,83	0/1:18,11:28:99:163,0,1032	0/0:32,0:32:93.30:0,93,2204	0/0:27,0:27:78.27:0,78,1805	0/1:18,7:24:99:106,0,764	0/1:18,1:19:35.95:36,0,553	0/0:18,0:13:39.13:0,39,961	0/0:13,0:13:39.13:0,39,961	0/0:83,0:79:99:0,220,5213	0/1:18,0:18:44.30:44,0,131	0/0:3,0:3:0:0,0,0	0/0:20,0:18:9.47:0,9,108	0/1:14,10:24:99:240,0,630	0/1:14,4:18:99:111,0,503	0/0:25,0:24:69.24:0,69,1638	0/1:4,6:10:99:109,0,192
chr10	48990909	.	ACAGTG	A	4078.63	PASS	AB=0.657;AC=17;AF=0.327;AN=52;BaseQRankSum=11.605;DP=711;FS=4.595;HRun=0;HaplotypeScore=91.2483;InbreedingCoeff=0.6553;MQ=42.02;MQ0=113;MQRankSum=-5.045;QD=25.49;ReadPosRankSum=-1.519;VQSLOD=2.4576;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:33:75.26:0,75,2285	0/0:8,0:5:15.05:0,15,461	./.	./.	1/1:9,5:8:2.84:61,3,0	0/0:15,0:10:18.06:0,18,553	0/0:41,0:22:48.16:0,48,1473	0/1:14,9:14:99:398,0,175	0/0:28,0:21:48.16:0,48,1446	1/1:6,15:17:45.15:911,45,0	1/1:3,8:9:2.49:61,2,0	0/0:32,0:30:75.26:0,75,2230	0/0:22,0:14:33.11:0,33,1013	1/1:2,20:18:30.05:616,30,0	0/0:31,0:29:75.26:0,75,2212	0/0:27,0:21:57.18:0,57,1662	1/1:6,9:11:24.08:497,24,0	0/1:4,5:7:99:274,0,163	0/0:23,0:11:27.07:0,27,759	0/0:28,0:18:33.10:0,33,946	0/0:74,0:50:93.32:0,93,2858	0/0:26,0:19:33.11:0,33,958	0/0:22,0:20:39.13:0,39,1180	0/0:38,0:27:54.19:0,54,1629	1/1:6,6:9:11.78:236,12,0	0/1:9,16:21:99:718,0,242	0/0:15,0:12:27.09:0,27,762	1/1:3,5:6:15.05:305,15,0
chr10	48991042	.	T	TG	10380.79	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=15.416;DP=743;FS=7.117;HRun=0;HaplotypeScore=98.1529;InbreedingCoeff=0.9975;MQ=78.30;MQ0=0;MQRankSum=-3.807;QD=42.54;ReadPosRankSum=-0.887;VQSLOD=4.4069;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,153,2079	0/0:13,0:13:39.13:0,39,541	0/0:12,0:12:36.05:0,36,465	0/0:27,0:27:75.22:0,75,1017	1/1:7,11:18:33.04:491,33,0	0/0:20,0:20:57.17:0,57,778	0/0:39,0:38:99:0,108,1458	1/1:0,32:28:81.19:1231,81,0	0/0:25,0:25:75.25:0,75,1044	1/1:8,18:26:72.20:1071,72,0	1/1:0,12:12:33.04:481,33,0	0/0:36,0:36:99:0,102,1356	0/0:21,0:21:60.18:0,60,816	1/1:0,39:39:99:1814,114,0	0/0:30,0:30:90.30:0,90,1251	0/0:28,0:28:84.28:0,84,1173	1/1:7,41:48:99:2134,138,0	1/1:1,15:16:48.13:740,48,0	0/0:20,0:20:54.18:0,54,752	0/0:20,0:20:54.18:0,54,754	0/0:54,0:54:99:0,163,2233	0/0:34,0:34:99:0,102,1377	0/0:19,0:19:57.13:0,57,742	0/0:27,0:27:78.25:0,78,1075	1/1:1,15:16:45.08:674,45,0	1/1:4,28:32:96.31:1505,96,0	0/0:21,0:21:60.20:0,60,838	1/1:0,5:5:15.05:239,15,0
chr10	48991130	.	T	TG	11072.42	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=7.703;DP=759;FS=1.982;HRun=0;HaplotypeScore=86.3410;InbreedingCoeff=0.9991;MQ=84.36;MQ0=0;MQRankSum=-5.079;QD=44.65;ReadPosRankSum=0.083;VQSLOD=4.8070;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:63,0:63:99:0,181,2480	0/0:13,0:13:39.13:0,39,545	0/0:27,0:27:74.71:0,75,933	0/0:23,0:23:29.68:0,30,650	1/1:0,20:20:54.18:857,54,0	0/0:25,0:24:69.21:0,69,946	0/0:36,0:36:99:0,102,1377	1/1:1,30:31:90.31:1439,90,0	0/0:21,0:21:63.20:0,63,865	1/1:0,31:31:93.32:1482,93,0	1/1:0,11:11:27.09:428,27,0	0/0:28,0:28:84.27:0,84,1157	0/0:25,0:25:72.21:0,72,955	1/1:4,22:26:75.22:1148,75,0	0/0:44,0:44:99:0,126,1762	0/0:29,0:28:87.29:0,87,1217	1/1:2,48:50:99:2154,135,0	1/1:1,14:15:42.14:671,42,0	0/0:18,0:18:54.18:0,54,755	0/0:13,0:13:36.12:0,36,503	0/0:42,0:42:99:0,126,1762	0/0:26,0:26:69.22:0,69,949	0/0:12,0:12:36.09:0,36,482	0/0:44,0:44:99:0,129,1749	1/1:0,20:20:57.19:908,57,0	1/1:0,37:36:99:1650,105,0	0/0:22,0:22:66.20:0,66,890	1/1:0,7:7:21.07:335,21,0
chr10	48991723	.	C	CTG	3418.90	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=9.232;DP=462;FS=10.734;HRun=0;HaplotypeScore=67.3714;InbreedingCoeff=0.9918;MQ=81.89;MQ0=0;MQRankSum=-4.277;QD=45.59;ReadPosRankSum=1.556;VQSLOD=4.2783;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,123,1853	0/0:11,0:11:33.11:0,33,505	0/0:16,0:16:48.16:0,48,724	0/0:16,0:14:36.12:0,36,536	0/0:15,0:15:45.15:0,45,689	0/0:19,0:19:57.19:0,57,873	0/0:14,0:14:39.13:0,39,597	0/0:35,0:35:99:0,99,1477	0/0:14,0:14:39.13:0,39,597	0/0:10,0:10:30.10:0,30,460	0/0:12,0:12:33.11:0,33,503	1/1:1,18:19:51.17:981,51,0	1/1:1,14:15:36.12:695,36,0	0/0:14,0:14:39.13:0,39,595	0/0:15,0:15:39.13:0,39,591	0/0:20,0:20:60.20:0,60,919	0/0:18,0:18:54.18:0,54,827	0/0:14,0:14:30.10:0,30,459	0/0:19,0:19:54.18:0,54,824	0/0:19,0:19:57.19:0,57,873	0/0:20,0:20:54.16:0,54,804	1/1:1,9:10:27.09:412,27,0	1/1:1,13:15:36.12:694,36,0	1/1:0,16:16:33.11:636,33,0	0/0:11,0:11:30.10:0,30,459	0/0:15,0:15:45.15:0,45,689	0/0:10,0:10:30.10:0,30,459	0/0:5,0:5:12.04:0,12,184
chr10	48993277	.	C	CTGTGTGTGTGTG	3858.04	PASS	AB=1.000;AC=24;AF=0.429;AN=56;BaseQRankSum=4.453;DP=585;FS=2.190;HRun=0;HaplotypeScore=195.7760;InbreedingCoeff=0.4686;MQ=65.99;MQ0=4;MQRankSum=-5.302;QD=13.63;ReadPosRankSum=-4.487;VQSLOD=1.4029;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,120,2826	0/0:9,0:9:24.07:0,24,632	0/0:41,0:28:69.80:0,70,1344	0/0:43,0:34:73.91:0,74,1584	1/1:14,0:15:2.45:107,2,0	0/0:18,0:18:4.27:0,4,1143	0/0:26,0:26:72.19:0,72,1798	1/1:25,0:24:49.72:850,50,0	0/0:19,0:19:51.09:0,51,1614	1/1:11,0:11:16.68:231,17,0	1/1:10,0:12:10.56:184,11,0	0/1:21,0:21:99:348,0,310	0/1:19,0:19:89.15:89,0,392	0/0:4,1:15:0.94:0,1,2	0/0:24,0:24:72.20:0,72,1626	0/0:27,0:27:78.22:0,78,2336	1/1:26,0:26:14.79:323,15,0	1/1:4,11:22:9.39:213,9,0	0/1:20,0:18:0:0,0,455	0/0:7,0:7:12.02:0,12,171	0/1:37,0:35:41.82:42,0,362	0/0:9,0:9:12.02:0,12,163	0/1:9,0:9:57.55:58,0,59	0/0:19,0:19:21.04:0,21,294	1/1:16,0:20:36.01:763,36,0	1/1:17,0:18:12.94:418,13,0	0/1:20,0:19:99:141,0,372	1/1:7,0:7:2.24:89,2,0
chr10	48993279	.	C	CTGTGTGTGTGTGTGTG	8418.68	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=5.459;DP=664;FS=4.615;HRun=0;HaplotypeScore=292.1626;InbreedingCoeff=0.7814;MQ=60.14;MQ0=5;MQRankSum=-9.515;QD=20.84;ReadPosRankSum=-4.120;VQSLOD=2.8670;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:50:81.12:0,81,2499	0/0:9,0:9:21.03:0,21,499	0/0:43,0:28:7.39:0,7,589	0/0:42,0:33:35.34:0,35,689	1/1:25,0:25:2.88:72,3,0	0/0:19,0:21:25.47:0,25,1260	0/0:22,0:25:48.12:0,48,1529	1/1:27,0:26:31.34:935,31,0	0/0:17,0:18:39.13:0,39,1597	1/1:14,0:14:21.07:704,21,0	1/1:13,0:13:8.76:204,9,0	1/1:25,3:30:16.56:833,17,0	1/1:17,3:22:4.57:231,5,0	1/1:15,0:15:0.04:1,0,0	0/0:24,0:24:33.08:0,33,1064	0/0:27,0:28:69.14:0,69,2106	1/1:32,0:31:31:926,31,0	1/1:19,0:19:15.52:523,16,0	1/1:31,0:28:42.66:1251,43,0	1/1:12,0:12:2.45:23,2,0	1/1:37,0:33:6.94:144,7,0	1/1:15,0:15:2.56:25,3,0	1/1:16,0:16:6.85:311,7,0	1/1:21,2:23:0.47:1,0,0	1/1:21,0:21:21.07:605,21,0	1/1:21,0:21:27.08:867,27,0	1/1:23,0:22:18.02:586,18,0	1/1:8,0:8:6.02:177,6,0
chr10	48994496	.	ACT	A	765.91	PASS	AB=1.000;AC=36;AF=0.783;AN=46;BaseQRankSum=1.602;DP=330;FS=1.751;HRun=0;HaplotypeScore=67.8696;InbreedingCoeff=0.3222;MQ=56.21;MQ0=15;MQRankSum=-0.425;QD=3.14;ReadPosRankSum=1.602;VQSLOD=1.7257;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:17,16:31:5.58:30,6,0	0/0:6,0:6:9.01:0,9,95	./.	0/1:21,0:8:11.85:12,0,21	1/1:18,0:19:10.71:67,11,0	1/1:20,0:19:26.43:185,26,0	1/1:11,0:11:7.65:61,8,0	./.	1/1:2,5:7:3.01:33,3,0	1/1:8,0:10:0.83:28,1,0	1/1:8,0:9:2.83:24,3,0	0/0:12,0:8:0.47:0,0,1	1/1:4,0:4:1.43:29,1,0	./.	0/0:7,0:14:9.01:0,9,96	1/1:5,10:15:8.76:79,9,0	1/1:7,0:8:3.79:18,4,0	1/1:8,0:7:2.79:18,3,0	1/1:19,0:17:5.78:32,6,0	1/1:6,0:8:2.84:14,3,0	0/0:7,0:7:0:0,0,0	./.	1/1:3,0:3:2.96:19,3,0	./.	0/1:7,0:7:0:0,0,0	1/1:9,0:8:9.88:78,10,0	1/1:6,0:16:14.37:76,14,0	1/1:14,0:14:12.25:78,12,0
chr10	48994532	.	T	TCACACACACACA	1023.53	PASS	AB=0.969;AC=24;AF=0.500;AN=48;BaseQRankSum=4.643;DP=297;FS=20.253;HRun=0;HaplotypeScore=101.6756;InbreedingCoeff=-0.0450;MQ=47.42;MQ0=10;MQRankSum=-0.446;QD=5.82;ReadPosRankSum=-0.563;VQSLOD=0.2505;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:36:19.57:0,20,1008	0/0:5,0:5:9.01:0,9,107	0/0:16,0:2:3.01:0,3,114	0/1:12,0:5:9.48:9,0,127	1/1:11,0:11:1.30:26,1,0	0/1:18,0:18:48.45:48,0,613	0/0:14,0:14:2.69:0,3,828	0/1:12,0:12:98.13:98,0,119	0/0:8,0:8:9.01:0,9,226	0/1:8,0:8:20.50:25,0,20	1/1:7,0:7:2.99:24,3,0	0/1:10,6:14:6.05:144,0,6	1/1:6,0:6:3.40:197,3,0	1/1:3,0:3:2.99:23,3,0	0/0:14,0:14:24.07:0,24,687	0/0:14,0:14:14.89:0,15,451	1/1:7,0:7:9.42:46,9,0	1/1:4,0:3:3.01:135,3,0	0/1:17,0:17:23.91:24,0,122	0/1:9,0:8:15.23:15,0,55	./.	./.	1/1:2,0:2:2.60:10,3,0	./.	./.	0/1:7,0:7:4.17:4,0,41	0/1:22,0:21:17.30:17,0,317	0/1:13,0:13:74.40:325,0,74
chr10	48994534	.	T	TCACACA	2952.74	PASS	AB=1.000;AC=31;AF=0.646;AN=48;BaseQRankSum=4.712;DP=339;FS=1.495;HRun=0;HaplotypeScore=103.3372;InbreedingCoeff=0.6804;MQ=45.76;MQ0=10;MQRankSum=-3.961;QD=15.46;ReadPosRankSum=0.218;VQSLOD=3.0865;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:39:39.09:0,39,671	1/1:5,0:5:2.94:18,3,0	0/0:17,0:1:3.01:0,3,62	0/0:11,0:5:6.02:0,6,83	1/1:14,0:14:4.90:44,5,0	0/0:18,0:18:20.93:0,21,436	0/0:11,0:11:25.31:0,25,487	1/1:17,0:14:8.37:175,8,0	0/0:8,0:8:9.03:0,9,164	1/1:14,0:14:25.33:381,25,0	1/1:7,0:7:3:26,3,0	1/1:19,0:15:6.49:147,6,0	1/1:9,0:9:12.02:206,12,0	1/1:8,0:8:2.96:46,3,0	0/0:14,0:14:21.06:0,21,346	0/0:14,0:14:15.05:0,15,283	1/1:12,0:12:9.92:158,10,0	1/1:10,0:9:8.86:140,9,0	1/1:17,0:17:29.89:528,30,0	1/1:9,0:8:14.64:179,15,0	./.	./.	1/1:2,0:2:2.98:21,3,0	./.	./.	1/1:11,0:11:10.28:180,10,0	1/1:23,0:22:37.64:691,38,0	0/1:14,0:14:2.53:187,0,3
chr10	48994872	.	TCACACACACACACACACACA	T	955.72	PASS	AC=6;AF=0.120;AN=50;BaseQRankSum=4.732;DP=337;FS=0.000;HRun=0;HaplotypeScore=154.6881;InbreedingCoeff=0.6981;MQ=63.28;MQ0=12;MQRankSum=-2.492;QD=21.72;ReadPosRankSum=-0.075;VQSLOD=1.8695;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:17.80:0,18,1388	0/0:4,0:5:12.04:0,12,1014	./.	./.	0/0:9,0:11:15.05:0,15,982	0/0:13,0:12:9.03:0,9,624	0/0:7,0:9:6.02:0,6,445	0/0:23,0:22:29.46:0,29,1412	0/0:3,0:5:12.04:0,12,765	0/0:11,0:11:15.05:0,15,1330	0/0:10,0:10:12.01:0,12,576	0/0:8,0:8:11.24:0,11,1117	0/0:4,0:5:9.03:0,9,691	0/0:5,0:9:6.02:0,6,514	0/0:9,0:9:27.04:0,27,1600	0/0:11,0:11:18.06:0,18,1228	0/0:20,0:22:39.13:0,39,3282	0/0:21,0:22:54.19:0,54,4432	1/1:16,2:17:5.66:211,6,0	1/1:11,5:16:9.03:405,9,0	./.	0/0:6,0:5:12.04:0,12,1071	0/0:5,0:5:5.51:0,6,488	0/0:12,0:11:15.05:0,15,1346	0/0:14,0:13:12.04:0,12,1035	0/0:9,0:11:24.08:0,24,1897	1/1:4,5:10:9.03:459,9,0	0/0:10,0:14:15.01:0,15,958
chr10	48995531	.	G	GCTCTCTGT	13018.12	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-6.121;DP=784;FS=1.207;HRun=0;HaplotypeScore=179.3390;InbreedingCoeff=0.9280;MQ=63.35;MQ0=7;MQRankSum=-9.607;QD=34.71;ReadPosRankSum=-3.194;VQSLOD=3.7060;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:93.32:0,93,2159	0/0:14,0:14:24.07:0,24,457	0/0:35,0:27:35.10:0,35,540	0/0:42,0:31:38.99:0,39,659	1/1:6,16:22:8.75:335,9,0	0/0:29,0:29:66.22:0,66,1472	0/0:28,0:28:63.19:0,63,1370	1/1:32,0:34:63.21:1197,63,0	0/0:16,0:16:39.12:0,39,908	1/1:5,23:32:79.51:2336,80,0	1/1:6,7:16:8.66:265,9,0	0/0:15,0:15:18.06:0,18,932	0/0:36,0:36:93.27:0,93,2076	1/1:3,33:39:27.09:1123,27,0	0/0:27,0:27:72.25:0,72,1570	0/0:35,0:35:87.27:0,87,1893	1/1:5,8:16:3.01:85,3,0	1/1:7,9:21:12.04:502,12,0	1/1:11,11:21:39.09:850,39,0	1/1:4,18:22:23.88:1002,24,0	1/1:11,16:28:3.01:85,3,0	0/0:24,0:24:66.20:0,66,1459	0/0:29,0:29:66.21:0,66,1518	0/0:37,0:37:60.30:0,60,1840	1/1:6,25:34:30.10:1253,30,0	1/1:6,27:34:75.69:2162,76,0	1/1:4,29:35:30.10:1236,30,0	1/1:4,10:14:18.06:589,18,0
chr10	48995546	.	G	GTC	2932.41	PASS	AB=0.965;AC=14;AF=0.250;AN=56;BaseQRankSum=10.095;DP=797;FS=6.082;HRun=0;HaplotypeScore=147.2616;InbreedingCoeff=-0.0041;MQ=57.63;MQ0=10;MQRankSum=-9.498;QD=8.68;ReadPosRankSum=2.216;VQSLOD=3.2216;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,109,1480	0/0:10,0:10:30.07:0,30,378	0/0:30,0:18:45.03:0,45,574	0/0:45,0:28:54.86:0,55,668	0/1:25,1:25:41.08:41,0,125	0/0:30,0:30:78.26:0,78,1068	0/0:29,0:29:75.25:0,75,1030	0/1:26,11:36:99:471,0,715	0/0:17,0:17:48.16:0,48,659	0/1:32,0:32:99:628,0,169	1/1:13,0:13:4.82:32,5,0	0/0:18,0:18:47.25:0,47,643	0/0:36,0:36:99:0,99,1307	0/1:36,0:36:48.34:219,0,48	0/0:28,0:28:81.27:0,81,1110	0/0:31,0:31:90.30:0,90,1236	0/0:21,0:20:9.88:0,10,94	0/1:25,0:25:47.27:47,0,257	0/1:23,0:21:99:323,0,240	0/1:30,1:30:99:153,0,370	0/0:21,0:21:6:0,6,52	0/0:30,0:30:90.28:0,90,1215	0/0:34,0:34:84.21:0,84,1111	0/0:36,0:36:78.37:0,78,1334	0/1:31,1:31:45.97:240,0,46	0/1:32,0:32:99:538,0,134	0/1:37,1:37:99:205,0,104	1/1:13,0:13:18.03:197,18,0
chr10	48997233	.	TCATCCATC	T	1134.04	PASS	AC=18;AF=0.333;AN=54;BaseQRankSum=6.308;DP=193;FS=9.597;HRun=0;HaplotypeScore=51.0033;InbreedingCoeff=0.7887;MQ=63.56;MQ0=6;MQRankSum=0.385;QD=25.77;ReadPosRankSum=-1.835;VQSLOD=0.6845;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:30.09:0,30,697	0/0:4,0:4:9:0,9,110	0/0:12,0:7:15.02:0,15,292	0/0:19,0:10:18.02:0,18,397	1/1:3,0:3:9.01:106,9,0	0/0:10,0:10:24.05:0,24,500	0/0:8,0:8:18.06:0,18,364	1/1:1,6:7:18.01:234,18,0	0/0:6,0:6:18.02:0,18,246	1/1:3,3:5:6.66:226,7,0	1/1:4,2:6:3.01:80,3,0	0/0:7,0:7:21.04:0,21,446	0/0:5,0:5:12.03:0,12,220	1/1:1,2:3:3.01:80,3,0	0/0:11,0:11:30.06:0,30,712	0/0:7,0:7:15.02:0,15,278	1/1:3,0:3:6.02:105,6,0	./.	0/0:5,0:5:6.02:0,6,112	0/0:2,0:2:6.02:0,6,100	0/0:12,0:11:24.05:0,24,340	0/0:6,0:6:11.99:0,12,125	0/0:5,0:4:9.02:0,9,198	0/0:8,0:8:18.06:0,18,307	1/1:8,0:8:15.04:259,15,0	1/1:0,4:4:12.01:204,12,0	0/0:8,0:8:21.07:0,21,350	1/1:4,0:4:2.98:22,3,0
chr10	48997810	.	A	AGAGG	12032.95	PASS	AB=0.959;AC=17;AF=0.304;AN=56;BaseQRankSum=7.364;DP=534;FS=2.442;HRun=0;HaplotypeScore=221.1201;InbreedingCoeff=0.6825;MQ=44.69;MQ0=16;MQRankSum=-9.181;QD=44.40;ReadPosRankSum=-0.618;VQSLOD=5.0686;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:19:54.16:0,54,943	0/0:8,0:7:21.07:0,21,382	0/0:7,0:2:2.90:0,3,16	0/0:8,0:1:0:0,0,0	1/1:31,9:40:96.29:1707,96,0	0/0:19,0:19:50.55:0,51,863	0/0:13,0:13:30.10:0,30,553	0/1:41,0:40:99:875,0,398	0/0:17,0:16:48.15:0,48,876	1/1:16,8:22:12.50:1103,13,0	1/1:23,6:28:75.24:1409,75,0	0/0:16,0:16:39.60:0,40,708	0/0:14,0:13:36.12:0,36,612	1/1:14,11:25:75.18:1494,75,0	0/0:20,0:20:60.21:0,60,1101	0/0:17,0:16:48.16:0,48,911	0/1:13,1:11:13.13:292,0,13	0/1:16,1:16:21.17:668,0,21	0/0:14,0:14:36.88:0,37,624	0/0:19,0:18:42.06:0,42,647	0/0:3,0:3:5.89:0,6,67	0/0:11,0:11:27.09:0,27,495	0/0:19,0:19:48.16:0,48,848	0/0:6,0:6:12.01:0,12,163	1/1:27,9:34:99:2022,99,0	1/1:26,6:32:90.30:1834,90,0	0/0:30,0:29:84.29:0,84,1472	1/1:6,7:11:27.08:629,27,0
chr10	48997817	.	AAGAAAGAGAGAGAGAGAGAGAGAGAGAGAG	A	6369.40	PASS	AB=0.974;AC=15;AF=0.288;AN=52;BaseQRankSum=-4.234;DP=521;FS=3.702;HRun=0;HaplotypeScore=526.7547;InbreedingCoeff=0.7418;MQ=41.48;MQ0=19;MQRankSum=-4.994;QD=50.55;ReadPosRankSum=1.454;VQSLOD=0.6627;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:22:60.14:0,60,4675	0/0:6,0:5:15.04:0,15,674	./.	./.	0/0:41,0:41:60.83:0,61,1958	0/0:23,0:23:63.65:0,64,3759	0/0:13,0:13:34.34:0,34,1558	0/0:40,0:37:63.32:0,63,881	0/0:16,0:15:45.14:0,45,3564	0/0:24,0:22:63.13:0,63,2137	0/0:27,0:26:17.62:0,18,1157	1/1:17,0:18:10.49:418,10,0	1/1:14,0:13:16.54:331,17,0	0/0:26,0:26:77.24:0,77,2040	0/0:20,0:20:60.18:0,60,4059	0/0:17,0:15:42.11:0,42,3007	0/0:13,0:10:14.84:0,15,169	0/0:15,0:14:18.83:0,19,441	1/1:13,0:13:26.92:857,27,0	1/1:11,5:15:42.14:1882,42,0	0/1:2,0:2:3.65:52,0,4	0/1:11,0:12:25.65:246,0,26	0/1:19,0:18:5.18:339,0,5	1/1:6,0:6:8.14:73,8,0	0/0:33,0:31:72.26:0,72,1987	0/0:34,0:33:95.88:0,96,1457	1/1:25,1:25:72.21:2170,72,0	0/0:12,0:10:24.08:0,24,1505
chr10	48997819	.	GAA	G	1554.97	PASS	AB=0.907;AC=10;AF=0.192;AN=52;BaseQRankSum=-4.085;DP=525;FS=6.983;HRun=3;HaplotypeScore=276.2541;InbreedingCoeff=0.1340;MQ=39.53;MQ0=20;MQRankSum=-2.191;QD=11.87;ReadPosRankSum=2.933;VQSLOD=0.2693;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:23:23.06:0,23,622	0/0:5,1:5:15.02:0,15,166	./.	./.	0/0:41,0:41:99:0,104,986	0/0:22,0:22:18.47:0,18,544	0/0:13,0:13:19.86:0,20,361	0/0:40,0:37:81.96:0,82,558	0/0:16,0:15:44.45:0,44,574	0/0:24,0:22:62.20:0,62,592	0/0:27,0:26:77.47:0,77,633	0/1:14,3:17:84.40:244,0,84	0/1:12,1:12:52.37:164,0,52	0/0:26,0:26:77.88:0,78,764	0/0:20,0:20:50.99:0,51,699	0/0:17,0:15:17.56:0,18,493	0/0:11,0:8:17.62:0,18,123	0/0:15,0:14:37.81:0,38,285	1/1:12,1:13:20.74:172,21,0	0/1:16,1:16:6.26:229,0,6	0/1:2,0:2:1.25:13,0,1	0/1:11,1:12:81.28:178,0,81	0/1:16,4:19:20.99:285,0,21	0/1:4,1:5:10.94:22,0,11	0/0:33,0:31:92.73:0,93,848	0/0:34,0:33:94.33:0,94,808	0/1:30,2:31:99:395,0,111	0/0:13,0:10:24.06:0,24,257
chr10	48997823	.	GA	G	151.17	PASS	AB=0.693;AC=9;AF=0.173;AN=52;BaseQRankSum=12.777;DP=523;FS=1.989;HRun=3;HaplotypeScore=274.6493;InbreedingCoeff=0.0524;MQ=38.95;MQ0=23;MQRankSum=-8.544;QD=0.75;ReadPosRankSum=5.005;VQSLOD=-0.2991;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:23:61.26:0,61,853	0/0:8,0:7:21.03:0,21,251	./.	./.	0/1:14,24:38:9.11:9,0,167	0/0:23,0:23:62.48:0,62,866	0/0:14,0:14:38.09:0,38,496	0/0:38,0:35:92.11:0,92,931	0/0:16,0:15:45.15:0,45,640	0/1:11,12:21:57.83:87,0,58	0/1:17,10:26:8.50:9,0,220	0/0:18,0:18:46.92:0,47,475	0/0:13,0:12:32.81:0,33,321	0/1:7,19:26:30.24:30,0,62	0/0:20,0:20:59.20:0,59,811	0/0:18,0:16:44.17:0,44,587	0/1:9,2:7:3.62:4,0,52	0/0:12,2:13:6.03:0,6,138	0/0:14,0:14:37.34:0,37,413	0/0:16,0:15:22.54:0,23,339	0/0:3,0:2:3.01:0,3,35	0/0:13,0:13:32.61:0,33,326	0/0:20,0:19:40.65:0,41,399	0/0:6,0:5:9.03:0,9,114	0/1:17,15:30:15.56:16,0,139	0/1:21,11:31:59.78:60,0,203	0/0:32,0:31:92.86:0,93,903	1/1:5,8:10:19.88:73,20,0
chr10	48997826	.	A	AT	1803.63	PASS	AB=0.890;AC=17;AF=0.315;AN=54;BaseQRankSum=12.766;DP=531;FS=1.731;HRun=0;HaplotypeScore=265.1444;InbreedingCoeff=0.6629;MQ=37.88;MQ0=25;MQRankSum=-10.914;QD=6.99;ReadPosRankSum=4.529;VQSLOD=3.3567;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:24:63.03:0,63,807	0/0:8,0:7:21.07:0,21,290	0/0:5,0:1:0:0,0,0	./.	1/1:16,24:40:40.54:232,41,0	0/0:24,0:24:63.68:0,64,863	0/0:13,0:13:36.03:0,36,458	0/1:38,0:35:37.81:38,0,624	0/0:17,0:16:45.15:0,45,625	1/1:13,12:24:4.48:374,4,0	1/1:16,10:26:19.34:143,19,0	0/0:18,0:18:51.14:0,51,647	0/0:12,0:11:33.08:0,33,408	1/1:7,19:26:55.10:312,55,0	0/0:20,0:20:57.12:0,57,769	0/0:18,0:16:45.08:0,45,602	0/1:10,2:8:23.06:23,0,27	0/1:10,2:12:54.60:55,0,100	0/0:14,0:14:39.12:0,39,518	0/0:16,0:15:42.77:0,43,486	0/0:3,0:2:3.01:0,3,41	0/0:13,0:13:36.09:0,36,448	0/0:18,0:17:45.06:0,45,538	0/0:7,0:6:9.03:0,9,126	1/1:17,15:30:48.95:294,49,0	1/1:19,11:30:36.41:330,36,0	0/0:31,0:30:90.24:0,90,1146	1/1:5,8:10:23.91:195,24,0
chr10	48997830	.	A	AT	204.38	PASS	AB=0.848;AC=10;AF=0.179;AN=56;BaseQRankSum=6.598;DP=525;FS=0.000;HRun=0;HaplotypeScore=268.3374;InbreedingCoeff=-0.1404;MQ=36.88;MQ0=28;MQRankSum=-8.123;QD=0.92;ReadPosRankSum=1.274;VQSLOD=1.8699;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:23:57.94:0,58,748	0/0:9,0:8:24.08:0,24,329	0/1:14,0:3:0.01:0,0,0	0/1:16,0:5:1.82:2,0,26	0/1:28,8:36:29.31:29,0,486	0/0:23,0:23:63.68:0,64,867	0/0:14,0:14:38.07:0,38,454	0/0:27,5:29:11.95:0,12,785	0/0:15,0:14:42.14:0,42,584	0/1:21,5:24:33.58:34,0,231	0/1:17,8:24:65.33:65,0,160	0/0:14,0:14:39.11:0,39,500	0/0:12,0:11:33.05:0,33,404	0/1:19,5:24:29.91:30,0,278	0/0:20,0:20:60.13:0,60,811	0/0:17,0:15:42.07:0,42,561	0/1:11,2:9:15.52:16,0,76	0/1:12,4:15:55.94:56,0,168	0/0:15,0:15:42.03:0,42,526	0/0:17,0:16:45.74:0,46,497	0/0:3,0:2:3.01:0,3,41	0/0:14,0:14:42.06:0,42,499	0/0:18,0:17:45.11:0,45,563	0/0:7,0:6:12.03:0,12,156	0/1:19,7:24:25.35:25,0,234	0/1:19,7:25:81.30:81,0,229	0/0:33,0:32:96.22:0,96,1204	0/0:13,0:10:12.72:0,13,63
chr10	48997838	.	A	AT	286.24	PASS	AB=0.801;AC=4;AF=0.071;AN=56;BaseQRankSum=-0.410;DP=552;FS=0.772;HRun=0;HaplotypeScore=266.4718;InbreedingCoeff=0.0845;MQ=37.98;MQ0=34;MQRankSum=-2.996;QD=4.77;ReadPosRankSum=-1.211;VQSLOD=2.9794;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:27:71.88:0,72,908	0/0:8,0:7:21.07:0,21,289	0/0:23,0:4:9.02:0,9,111	0/0:33,0:9:10.03:0,10,138	0/0:37,0:37:85.46:0,85,988	0/0:29,0:29:81.74:0,82,1110	0/0:13,0:13:33.02:0,33,411	0/0:25,0:22:61.35:0,61,634	0/0:15,0:14:42.14:0,42,584	0/0:26,0:24:64.98:0,65,763	0/0:25,0:24:60.15:0,60,690	0/0:14,0:14:39.09:0,39,454	0/0:11,0:10:27.06:0,27,319	0/0:26,0:26:72.13:0,72,835	0/0:21,0:21:63.14:0,63,852	0/0:19,0:17:48.09:0,48,643	0/0:13,0:9:18.05:0,18,212	0/0:14,0:13:32.52:0,33,350	0/1:8,5:12:99:100,0,115	0/1:11,5:15:99:122,0,125	0/1:3,0:2:0:0,0,0	0/0:16,0:15:43.89:0,44,482	0/0:18,0:17:50.97:0,51,525	0/0:7,0:6:11.65:0,12,102	0/0:27,0:25:69.19:0,69,815	0/0:28,0:27:78.19:0,78,937	0/1:17,11:27:99:164,0,384	0/0:13,0:10:24.07:0,24,294
chr10	48997871	.	AAG	A	10126.43	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=12.280;DP=604;FS=1.210;HRun=0;HaplotypeScore=189.3724;InbreedingCoeff=0.9694;MQ=58.89;MQ0=19;MQRankSum=-9.167;QD=29.35;ReadPosRankSum=2.204;VQSLOD=5.9273;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:84.23:0,84,1299	0/0:7,0:6:18.06:0,18,295	0/0:55,1:24:24.36:0,24,411	0/0:69,0:21:5.89:0,6,347	1/1:4,30:34:84.22:1043,84,0	0/0:31,0:31:88.85:0,89,1434	0/0:13,0:13:33.11:0,33,540	1/1:6,23:28:63.19:787,63,0	0/0:13,0:13:33.09:0,33,525	1/1:7,20:27:60.18:745,60,0	1/1:4,25:29:69.22:878,69,0	1/1:0,13:13:36.12:458,36,0	1/1:0,7:7:21.07:267,21,0	1/1:6,13:19:39.12:496,39,0	0/0:19,0:19:54.17:0,54,872	0/0:20,0:19:48.15:0,48,766	1/1:3,9:10:19.09:264,19,0	1/1:5,12:16:30.09:366,30,0	1/1:5,9:11:24.08:304,24,0	1/1:1,20:21:57.15:708,57,0	1/1:1,4:5:12.01:153,12,0	1/1:0,13:13:33.11:420,33,0	1/1:0,16:15:42.13:534,42,0	1/1:0,5:5:12.04:153,12,0	1/1:5,18:22:51.16:645,51,0	1/1:4,21:24:60.19:763,60,0	1/1:1,24:25:65.76:839,66,0	1/1:3,8:11:24.08:305,24,0
chr10	48998225	.	CT	C	2154.29	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=11.221;DP=536;FS=1.085;HRun=1;HaplotypeScore=60.0830;InbreedingCoeff=0.9519;MQ=53.84;MQ0=24;MQRankSum=-7.684;QD=34.20;ReadPosRankSum=-4.610;VQSLOD=2.0778;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,163,2566	0/0:5,0:5:15.04:0,15,217	0/0:41,0:9:27.07:0,27,394	0/0:31,0:10:30.09:0,30,444	1/1:0,6:6:15.05:209,15,0	0/0:25,0:25:75.26:0,75,1197	0/0:22,0:22:66.21:0,66,1032	1/1:0,7:7:21.06:275,21,0	0/0:20,0:20:60.17:0,60,912	1/1:0,10:10:30.09:400,30,0	1/1:0,3:3:3.01:42,3,0	0/0:17,0:17:51.17:0,51,815	0/0:19,0:19:57.19:0,57,909	1/1:0,6:6:18.06:250,18,0	0/0:30,0:30:87.27:0,87,1344	0/0:25,0:25:75.26:0,75,1199	1/1:0,8:8:24.08:334,24,0	1/1:0,4:4:9.03:125,9,0	0/0:17,0:12:36.12:0,36,574	0/0:23,0:23:66.19:0,66,1007	0/0:39,0:39:99:0,108,1700	0/0:25,0:25:75.23:0,75,1151	0/0:26,0:25:75.24:0,75,1175	0/0:29,0:29:84.23:0,84,1288	1/1:0,8:8:21.07:291,21,0	1/1:0,7:7:21.06:275,21,0	0/0:25,0:25:75.26:0,75,1199	1/1:0,4:4:12.04:167,12,0
chr10	48998296	.	G	GA	813.77	PASS	AC=18;AF=0.333;AN=54;BaseQRankSum=8.452;DP=440;FS=1.654;HRun=1;HaplotypeScore=55.4900;InbreedingCoeff=0.8649;MQ=56.14;MQ0=5;MQRankSum=-8.201;QD=25.43;ReadPosRankSum=-1.709;VQSLOD=3.1145;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,117,1490	0/0:6,0:6:18.06:0,18,234	0/0:29,0:9:27.09:0,27,350	0/0:36,0:17:48.12:0,48,566	./.	0/0:10,0:10:30.09:0,30,377	0/0:23,0:23:69.22:0,69,895	1/1:0,1:1:3.01:45,3,0	0/0:20,0:20:60.18:0,60,764	1/1:1,2:3:6.02:90,6,0	1/1:1,4:5:3.01:45,3,0	0/0:19,0:19:57.19:0,57,740	0/0:18,0:17:48.13:0,48,593	1/1:0,6:6:17.95:211,18,0	0/0:26,0:26:72.22:0,72,920	0/0:22,0:22:63.20:0,63,817	1/1:0,4:4:11.97:152,12,0	1/1:0,3:3:9.03:134,9,0	0/0:15,0:15:39.08:0,39,487	0/0:25,0:25:75.22:0,75,945	0/0:26,0:26:72.23:0,72,929	0/0:17,0:17:51.17:0,51,662	0/0:22,0:22:66.19:0,66,839	0/0:29,0:29:81.26:0,81,1052	1/1:0,5:5:14.85:143,15,0	1/1:1,3:4:9.03:134,9,0	0/0:25,0:25:72.20:0,72,903	1/1:0,1:1:3.01:45,3,0
chr10	48998343	.	C	CGT	7780.55	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=2.968;DP=575;FS=8.110;HRun=0;HaplotypeScore=96.0904;InbreedingCoeff=0.9801;MQ=91.85;MQ0=0;MQRankSum=-7.045;QD=46.31;ReadPosRankSum=-0.863;VQSLOD=5.1645;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:81.22:0,81,1118	0/0:7,0:7:21.07:0,21,301	0/0:30,0:30:81.08:0,81,1106	0/0:26,0:26:75.20:0,75,1007	1/1:1,6:7:5.77:109,6,0	0/0:11,0:11:27.09:0,27,387	0/0:21,0:21:54.16:0,54,752	1/1:6,26:33:75.24:1345,75,0	0/0:21,0:21:60.18:0,60,840	1/1:1,14:16:45.13:791,45,0	1/1:2,12:16:29.90:548,30,0	0/0:22,0:22:66.22:0,66,945	0/0:22,0:22:60.20:0,60,859	1/1:0,19:19:57.20:1043,57,0	0/0:26,0:26:75.25:0,75,1074	0/0:30,0:30:84.27:0,84,1180	1/1:0,27:27:78.27:1427,78,0	1/1:0,13:13:33.11:604,33,0	0/0:20,0:20:57.17:0,57,780	0/0:25,0:25:69.23:0,69,987	0/0:27,0:27:78.26:0,78,1117	0/0:13,0:13:24.08:0,24,344	0/0:18,0:18:48.13:0,48,667	0/0:24,0:24:72.22:0,72,1012	1/1:1,12:14:36.12:657,36,0	1/1:0,18:18:54.19:983,54,0	0/0:32,0:32:84.27:0,84,1181	1/1:0,5:5:15.05:273,15,0
chr10	48999309	.	GGT	G	1380.72	PASS	AB=0.887;AC=15;AF=0.288;AN=52;BaseQRankSum=0.577;DP=722;FS=4.780;HRun=0;HaplotypeScore=125.4240;InbreedingCoeff=0.3666;MQ=66.90;MQ0=6;MQRankSum=3.061;QD=4.68;ReadPosRankSum=3.125;VQSLOD=2.6803;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,1:37:9.75:0,10,647	0/0:9,0:9:11.63:0,12,143	./.	./.	0/0:25,0:25:12.01:0,12,123	0/0:27,0:27:48.44:0,48,734	0/1:26,1:27:2.97:3,0,343	0/0:35,0:34:26.76:0,27,217	0/1:26,0:25:31.18:31,0,286	0/0:34,0:34:24:0,24,207	0/0:17,0:16:2.22:0,2,29	0/0:16,0:26:27.01:0,27,286	0/0:23,0:30:59.60:0,60,522	0/0:25,0:25:17.73:0,18,138	0/1:28,3:31:27.10:27,0,390	0/1:27,1:28:59.23:59,0,442	0/0:32,0:32:17.68:0,18,129	0/0:20,0:19:11.97:0,12,97	1/1:19,3:21:11.84:102,12,0	0/1:11,14:25:6.38:303,0,6	1/1:22,17:38:28.67:325,29,0	0/0:5,0:13:18.01:0,18,176	0/1:13,0:21:6.41:30,0,6	1/1:14,0:39:62.48:307,62,0	0/0:22,0:22:8.86:0,9,81	0/0:20,0:20:10.79:0,11,75	1/1:12,11:25:35.44:358,35,0	0/1:11,0:11:2.54:3,0,71
chr10	48999310	.	G	GTGTGTA	5409.32	PASS	AB=0.571;AC=18;AF=0.321;AN=56;BaseQRankSum=-1.388;DP=781;FS=7.124;HRun=0;HaplotypeScore=198.4335;InbreedingCoeff=0.7792;MQ=64.81;MQ0=6;MQRankSum=-1.179;QD=18.46;ReadPosRankSum=-6.241;VQSLOD=1.9664;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:95.65:0,96,1401	0/0:11,0:11:23.79:0,24,273	0/0:26,0:25:46.33:0,46,494	0/0:28,0:22:44.90:0,45,413	0/1:9,20:32:8.19:209,0,8	0/0:27,0:27:52.19:0,52,1181	0/0:27,0:27:38.91:0,39,788	1/1:38,0:37:83.39:817,83,0	0/0:27,0:26:53.55:0,54,697	1/1:6,27:37:94.44:1134,94,0	1/1:10,9:19:6.02:94,6,0	0/0:27,0:27:52.87:0,53,505	0/0:31,0:31:30.78:0,31,422	1/1:10,21:32:17.84:574,18,0	0/0:32,0:32:87.02:0,87,1133	0/0:27,0:27:59.53:0,60,938	1/1:6,27:34:13.63:220,14,0	0/1:6,18:27:17.42:543,0,17	0/0:24,0:22:57.03:0,57,534	0/0:25,0:25:47.77:0,48,654	0/0:39,0:38:54.34:0,54,762	0/0:15,0:15:22.73:0,23,158	0/0:20,0:20:30.32:0,30,330	0/0:39,0:39:87.09:0,87,1231	1/1:9,17:28:0.07:380,0,0	1/1:26,0:26:71.73:1103,72,0	0/0:25,0:25:56.91:0,57,737	1/1:7,7:17:15.05:336,15,0
chr10	48999312	.	G	GTGTA	3797.98	PASS	AB=1.000;AC=18;AF=0.321;AN=56;BaseQRankSum=0.860;DP=793;FS=2.357;HRun=0;HaplotypeScore=185.4199;InbreedingCoeff=0.5801;MQ=62.43;MQ0=8;MQRankSum=-1.970;QD=11.83;ReadPosRankSum=-3.874;VQSLOD=2.5850;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,102,1286	0/0:13,0:13:26.77:0,27,270	0/0:27,0:24:46.37:0,46,494	0/0:30,0:20:44.90:0,45,413	1/1:31,0:31:9.17:108,9,0	0/0:27,0:27:74.96:0,75,1087	0/0:28,0:28:16.85:0,17,720	1/1:38,0:37:42.18:624,42,0	0/0:27,0:26:45.44:0,45,679	1/1:32,2:34:26.30:773,26,0	0/1:20,0:19:16.94:30,0,17	0/0:28,0:28:43.20:0,43,424	0/1:31,0:31:6.46:6,0,339	0/1:33,0:32:21.82:313,0,22	0/0:33,0:33:90.01:0,90,1046	0/0:27,0:27:64.63:0,65,892	1/1:32,2:34:15.09:256,15,0	0/1:28,0:27:38.43:275,0,38	0/0:27,0:25:58.90:0,59,499	0/0:26,0:26:50.67:0,51,532	0/0:41,0:40:65.63:0,66,672	0/0:15,0:15:14.35:0,14,126	0/0:21,0:21:29.82:0,30,270	0/0:39,0:39:87.04:0,87,933	1/1:25,2:27:0.07:312,0,0	1/1:28,0:28:72.25:788,72,0	0/0:24,0:24:59.86:0,60,625	1/1:16,1:17:0.77:314,1,0
chr10	48999314	.	G	GTA	2055.32	PASS	AB=0.958;AC=13;AF=0.232;AN=56;BaseQRankSum=1.515;DP=797;FS=4.099;HRun=0;HaplotypeScore=147.4765;InbreedingCoeff=-0.0286;MQ=61.28;MQ0=11;MQRankSum=1.164;QD=5.99;ReadPosRankSum=-0.659;VQSLOD=3.1142;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:86.93:0,87,1109	0/0:13,0:13:32.97:0,33,320	0/0:26,0:22:46.46:0,46,494	0/0:31,0:19:44.90:0,45,413	0/1:30,0:30:30.53:33,0,31	0/0:28,0:28:54.21:0,54,896	0/0:28,0:28:71.18:0,71,734	0/1:37,0:36:88.65:460,0,89	0/0:29,0:28:69.38:0,69,701	0/1:32,0:33:5.24:523,0,5	0/0:20,1:20:0.03:0,0,21	0/1:30,0:30:28.52:29,0,363	0/1:31,0:31:99:131,0,262	0/1:32,1:32:47.34:108,0,47	0/0:32,0:32:92.92:0,93,940	0/0:25,0:25:65.57:0,66,772	1/1:34,1:35:13.61:167,14,0	0/1:26,0:25:60.35:99,0,60	0/0:25,0:23:67.34:0,67,544	0/0:27,0:27:43.40:0,43,397	0/0:42,0:41:70.17:0,70,619	0/1:15,0:15:74.51:75,0,91	0/0:21,0:21:14.40:0,14,211	0/0:42,0:42:84.94:0,85,633	0/1:26,0:26:0.96:118,0,1	0/1:10,19:30:82.43:370,0,82	0/0:26,0:26:59.69:0,60,464	0/1:17,0:17:23.47:101,0,23
chr10	49000942	.	G	GA	9263.37	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-9.490;DP=725;FS=2.935;HRun=3;HaplotypeScore=69.5429;InbreedingCoeff=0.9974;MQ=84.62;MQ0=0;MQRankSum=-1.290;QD=37.35;ReadPosRankSum=0.224;VQSLOD=5.3282;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,123,1416	0/0:5,0:5:15.05:0,15,180	0/0:21,0:21:51.12:0,51,566	0/0:27,0:26:60.13:0,60,678	1/1:0,22:22:66.22:924,66,0	0/0:27,0:27:72.20:0,72,852	0/0:40,0:40:99:0,111,1284	1/1:1,31:32:93.27:1251,93,0	0/0:24,0:24:69.20:0,69,816	1/1:0,24:24:72.23:993,72,0	1/1:1,15:16:42.14:588,42,0	0/0:31,0:31:90.23:0,90,1063	0/0:15,0:15:42.13:0,42,503	1/1:4,25:29:57.19:798,57,0	0/0:23,0:23:63.19:0,63,756	0/0:19,0:19:51.13:0,51,589	1/1:2,42:44:99:1722,123,0	1/1:1,30:31:84.27:1159,84,0	0/0:34,0:34:73.60:0,74,1051	0/0:23,0:23:54.15:0,54,636	0/0:38,0:38:99:0,102,1212	0/0:35,0:35:81.21:0,81,946	0/0:25,0:25:63.19:0,63,755	0/0:30,0:30:84.26:0,84,1008	1/1:1,13:14:33.11:462,33,0	1/1:3,24:27:72.23:991,72,0	0/0:17,0:16:51.16:0,51,611	1/1:1,8:9:27.09:375,27,0
chr10	49001173	.	GCAGGGC	G	5440.51	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=8.977;DP=771;FS=4.775;HRun=0;HaplotypeScore=176.1652;InbreedingCoeff=0.9985;MQ=86.75;MQ0=0;MQRankSum=-14.279;QD=43.88;ReadPosRankSum=2.474;VQSLOD=4.6038;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,123,4252	0/0:11,0:11:33.10:0,33,1061	0/0:26,0:26:78.26:0,78,2400	0/0:29,0:29:81.28:0,81,2628	0/0:36,0:36:99:0,105,3526	0/0:19,0:19:57.20:0,57,1961	0/0:27,0:27:78.25:0,78,2686	0/0:26,0:26:69.22:0,69,2265	0/0:25,0:25:75.26:0,75,2618	0/0:34,0:34:93.32:0,93,3175	0/0:19,0:19:54.19:0,54,1815	1/1:1,25:26:51.18:1201,51,0	1/1:1,27:28:68.97:1629,69,0	0/0:33,0:33:93.30:0,93,3056	0/0:42,0:42:99:0,120,4133	0/0:28,0:28:75.26:0,75,2607	0/0:34,0:34:99:0,102,3567	0/0:31,0:31:90.31:0,90,3030	0/0:19,0:19:51.18:0,51,1734	0/0:34,0:34:99:0,102,3515	0/0:51,0:51:99:0,144,4982	1/1:0,27:27:45.63:1058,46,0	1/1:2,21:23:42.14:989,42,0	1/1:3,17:20:23.80:564,24,0	0/0:14,0:14:42.14:0,42,1493	0/0:32,0:32:93.32:0,93,3226	0/0:27,0:27:78.24:0,78,2556	0/0:7,0:7:21.07:0,21,739
chr10	49001972	.	TCCC	T	10466.35	PASS	AB=0.993;AC=31;AF=0.554;AN=56;BaseQRankSum=12.393;DP=653;FS=0.978;HRun=5;HaplotypeScore=146.4211;InbreedingCoeff=0.7830;MQ=62.64;MQ0=1;MQRankSum=-10.625;QD=29.65;ReadPosRankSum=-3.574;VQSLOD=1.1514;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:90.25:0,90,1798	0/0:13,0:13:39.12:0,39,823	0/0:32,0:17:38.44:0,38,686	0/0:42,1:24:24.33:0,24,631	1/1:6,25:31:84.18:1238,84,0	0/0:30,0:30:87.25:0,87,1716	0/0:25,0:25:72.20:0,72,1413	1/1:2,12:14:39.12:589,39,0	0/0:17,0:17:51.15:0,51,1047	1/1:6,12:18:48.13:680,48,0	1/1:4,18:22:66.18:971,66,0	0/0:30,0:30:33.77:0,34,930	0/0:31,0:31:3.85:0,4,847	1/1:6,14:20:60.08:830,60,0	0/0:25,0:25:72.23:0,72,1541	0/0:22,0:22:63.19:0,63,1305	1/1:10,8:18:47.95:615,48,0	1/1:0,9:9:21.07:340,21,0	1/1:0,12:12:33.04:438,33,0	1/1:1,30:31:75.08:1109,75,0	1/1:2,23:25:42.14:702,42,0	0/1:20,0:20:68.20:68,0,409	0/1:17,0:17:3.36:3,0,446	0/1:47,0:48:42.68:43,0,1262	1/1:3,18:21:63.19:962,63,0	1/1:1,14:15:45.15:727,45,0	1/1:2,24:26:54.18:903,54,0	1/1:2,4:6:18.03:248,18,0
chr10	49001994	.	TTTC	T	6348.22	PASS	AB=0.647;AC=19;AF=0.339;AN=56;BaseQRankSum=12.259;DP=630;FS=0.000;HRun=0;HaplotypeScore=151.8620;InbreedingCoeff=0.9479;MQ=64.64;MQ0=0;MQRankSum=-14.407;QD=35.27;ReadPosRankSum=0.332;VQSLOD=4.8539;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:93.32:0,93,2024	0/0:13,0:13:33.11:0,33,693	0/0:29,0:25:57.12:0,57,1114	0/0:31,0:26:40.53:0,41,1034	1/1:4,24:28:57.19:897,57,0	0/0:29,0:29:87.30:0,87,1911	0/0:21,0:21:63.20:0,63,1304	1/1:7,18:25:54.16:844,54,0	0/0:17,0:17:48.16:0,48,1060	1/1:1,17:18:48.16:769,48,0	1/1:3,20:23:51.17:816,51,0	0/0:29,0:29:81.28:0,81,1769	0/0:33,0:33:96.31:0,96,2025	1/1:2,13:15:36.12:577,36,0	0/0:20,0:20:60.21:0,60,1310	0/0:18,0:18:42.11:0,42,821	1/1:2,16:18:36.12:577,36,0	0/1:5,6:11:1.76:283,0,2	0/0:15,0:15:42.05:0,42,760	0/0:29,0:29:81.28:0,81,1711	0/0:24,0:24:63.19:0,63,1329	0/0:13,0:13:39.13:0,39,852	0/0:15,0:15:42.12:0,42,825	0/0:53,0:53:99:0,153,3291	1/1:2,18:20:44.75:719,45,0	1/1:0,15:15:42.14:674,42,0	0/0:28,0:27:69.11:0,69,1423	1/1:2,5:7:12.04:193,12,0
chr10	49002312	.	AT	A	5663.66	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=15.600;DP=490;FS=14.146;HRun=8;HaplotypeScore=57.2373;InbreedingCoeff=0.9301;MQ=71.99;MQ0=0;MQRankSum=-1.671;QD=25.28;ReadPosRankSum=-0.087;VQSLOD=4.2292;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:48.06:0,48,561	0/0:7,0:7:15.05:0,15,181	0/0:11,0:11:20.16:0,20,199	0/1:8,0:8:8.02:8,0,141	1/1:3,25:28:66.10:637,66,0	0/0:20,0:20:54.17:0,54,652	0/0:11,0:11:24.07:0,24,290	1/1:2,28:30:84.07:790,84,0	0/0:16,0:16:42.13:0,42,506	1/1:0,30:30:90.15:869,90,0	1/1:2,21:23:63.10:608,63,0	0/0:15,0:15:45.14:0,45,544	0/0:12,0:12:30.09:0,30,362	1/1:0,11:11:33.05:319,33,0	0/0:15,0:15:42.12:0,42,496	0/0:13,0:13:36.11:0,36,435	1/1:1,20:21:51.08:492,51,0	1/1:0,15:15:45.07:435,45,0	0/0:14,0:14:39.11:0,39,460	0/0:30,0:30:78.22:0,78,921	0/0:10,0:10:30.09:0,30,362	0/0:17,0:17:45.13:0,45,532	0/0:23,0:23:69.21:0,69,833	0/0:9,0:9:24.07:0,24,290	1/1:3,20:23:60.09:579,60,0	1/1:3,22:25:66.10:637,66,0	0/0:27,0:27:66.20:0,66,797	1/1:0,10:10:30.05:290,30,0
chr10	49002772	.	G	GAGAATAACAAACGTGTGCACTGGGTTCACA	66762.08	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=6.139;DP=761;FS=8.576;HRun=0;HaplotypeScore=546.6490;InbreedingCoeff=0.9964;MQ=76.32;MQ0=0;MQRankSum=-20.310;QD=231.81;ReadPosRankSum=0.060;VQSLOD=3.9815;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:93.30:0,93,5718	0/0:10,0:10:30.08:0,30,1884	0/0:23,0:23:57.19:0,57,2468	0/0:19,0:19:49.91:0,50,1610	1/1:43,6:55:99:10642,135,0	0/0:26,0:26:78.27:0,78,5400	0/0:24,0:24:72.25:0,72,5058	1/1:40,0:40:99:6993,120,0	0/0:25,0:25:66.20:0,66,4033	1/1:34,6:41:99:11812,117,0	1/1:25,3:34:93.19:7122,93,0	0/0:27,0:27:78.25:0,78,5301	0/0:24,0:24:69.22:0,69,4622	1/1:25,1:28:72.25:6741,72,0	0/0:31,0:31:90.31:0,90,6427	0/0:26,0:26:72.19:0,72,4536	1/1:14,2:17:42.14:4679,42,0	1/1:7,0:7:15.05:1152,15,0	0/0:18,0:18:54.11:0,54,2861	0/0:37,0:37:99:0,108,7215	0/0:30,0:30:84.22:0,84,5735	0/0:35,0:35:99:0,105,6930	0/0:37,0:37:99:0,105,7147	0/0:25,0:25:72.21:0,72,4520	1/1:23,1:25:69.24:5757,69,0	1/1:28,4:35:99:9651,99,0	0/0:25,0:25:74.91:0,75,4408	1/1:3,3:6:18.06:2213,18,0
chr10	49004511	.	ATACGTGTT	A	8500.60	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=14.575;DP=707;FS=1.803;HRun=0;HaplotypeScore=183.9669;InbreedingCoeff=0.9794;MQ=76.49;MQ0=0;MQRankSum=-15.693;QD=73.28;ReadPosRankSum=1.824;VQSLOD=5.2005;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,157,6954	0/0:3,0:3:9.03:0,9,410	0/0:20,0:20:54.19:0,54,2152	0/0:23,0:23:69.20:0,69,2652	0/0:36,0:36:99:0,108,4621	0/0:20,0:19:54.19:0,54,2436	0/0:27,0:27:81.28:0,81,3482	0/0:35,0:35:99:0,105,4439	0/0:30,0:30:90.30:0,90,3866	0/0:36,0:36:99:0,108,4633	0/0:18,0:18:54.19:0,54,2446	1/1:3,20:23:51.13:1492,51,0	1/1:0,32:32:93.32:2721,93,0	0/0:17,0:17:51.15:0,51,2180	0/0:34,0:34:99:0,102,4411	0/0:25,0:25:75.26:0,75,3306	0/0:32,0:32:96.33:0,96,4004	0/0:17,0:17:51.16:0,51,2147	0/0:26,0:26:78.27:0,78,3362	0/0:20,0:20:60.21:0,60,2709	0/0:56,0:56:99:0,166,7197	1/1:0,29:29:84.29:2443,84,0	1/1:3,17:20:48.16:1404,48,0	1/1:3,9:12:15.50:440,16,0	0/0:9,0:9:27.09:0,27,1148	0/0:18,0:18:48.16:0,48,1990	0/0:32,0:32:93.32:0,93,4128	0/0:5,0:5:15.05:0,15,677
chr10	49006219	.	CTTTT	C	948.40	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=6.823;DP=447;FS=8.002;HRun=11;HaplotypeScore=119.4177;InbreedingCoeff=0.8712;MQ=67.63;MQ0=3;MQRankSum=-6.314;QD=18.60;ReadPosRankSum=0.104;VQSLOD=1.2734;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:57.19:0,57,1380	0/0:8,0:8:21.06:0,21,472	0/0:18,0:8:8.11:0,8,137	0/0:12,0:9:21.07:0,21,301	0/0:25,0:25:63.20:0,63,863	0/0:20,0:20:60.21:0,60,1475	0/0:11,0:11:27.09:0,27,674	0/0:27,0:27:72.23:0,72,915	0/0:15,0:15:42.14:0,42,958	0/0:25,0:25:72.22:0,72,893	0/0:20,0:20:57.15:0,57,688	0/0:12,0:12:29.97:0,30,619	0/0:9,0:9:14.93:0,15,308	0/0:16,0:16:34.61:0,35,520	0/0:14,0:14:36.12:0,36,867	0/0:14,0:14:33.09:0,33,393	0/0:24,0:24:42.08:0,42,497	0/0:30,0:30:69.21:0,69,835	1/1:7,3:9:12:168,12,0	1/1:15,2:17:41.54:521,42,0	1/1:1,0:1:2.99:23,3,0	0/0:3,0:3:6.02:0,6,123	0/0:13,0:13:24.08:0,24,547	0/0:3,0:3:9.03:0,9,199	0/0:20,0:20:54.17:0,54,679	0/0:18,0:18:42.13:0,42,530	1/1:21,2:23:44.83:384,45,0	0/0:18,0:18:36.11:0,36,455
chr10	49006226	.	T	TAA	688.60	PASS	AB=0.667;AC=7;AF=0.125;AN=56;BaseQRankSum=8.024;DP=427;FS=3.538;HRun=0;HaplotypeScore=106.2619;InbreedingCoeff=0.6384;MQ=66.07;MQ0=3;MQRankSum=-4.443;QD=17.66;ReadPosRankSum=2.461;VQSLOD=3.8574;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:60.20:0,60,971	0/0:7,0:7:21.07:0,21,328	0/0:18,0:7:16.81:0,17,133	0/0:11,0:8:8.83:0,9,168	0/0:27,0:27:68.97:0,69,829	0/0:22,0:22:66.23:0,66,1066	0/0:9,0:9:27.09:0,27,437	0/0:31,0:31:90.70:0,91,1081	0/0:15,0:15:45.15:0,45,708	0/0:27,0:27:78.52:0,79,934	0/0:19,0:19:57.17:0,57,728	0/0:12,0:12:29.96:0,30,443	0/0:10,0:10:15.05:0,15,249	0/0:15,0:16:36.11:0,36,504	0/0:13,0:13:39.13:0,39,631	0/0:14,0:14:33.08:0,33,406	0/0:23,0:23:42.14:0,42,553	0/0:26,0:26:69.22:0,69,907	0/1:3,3:5:25.98:34,0,26	1/1:5,0:16:2.86:138,3,0	1/1:0,1:1:3.01:44,3,0	0/0:2,0:2:6.02:0,6,99	0/0:10,0:10:24.08:0,24,393	0/0:3,0:3:9.03:0,9,146	0/0:21,0:21:54.16:0,54,697	0/0:17,0:17:45.04:0,45,540	1/1:2,14:16:31.58:601,32,0	0/0:14,0:14:36.11:0,36,465
chr10	49006229	.	T	TA	5638.60	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=6.700;DP=430;FS=0.000;HRun=0;HaplotypeScore=81.1475;InbreedingCoeff=0.8447;MQ=64.95;MQ0=4;MQRankSum=1.209;QD=20.73;ReadPosRankSum=4.933;VQSLOD=6.4880;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:63.16:0,63,816	0/0:7,0:7:21.06:0,21,276	0/0:18,0:7:9.23:0,9,102	0/0:12,0:8:9.03:0,9,132	1/1:5,20:25:31.34:445,31,0	0/0:23,0:23:69.19:0,69,877	0/0:9,0:9:27.06:0,27,334	1/1:2,28:30:77.44:789,77,0	0/0:13,1:14:8.27:0,8,450	1/1:5,22:27:48.69:674,49,0	1/1:5,12:18:27.21:410,27,0	0/0:12,0:12:15.57:0,16,102	0/0:11,0:11:13.27:0,13,56	1/1:3,13:16:21.72:271,22,0	0/0:14,0:14:39.08:0,39,477	1/1:2,11:13:18.28:246,18,0	1/1:0,22:23:30.57:404,31,0	1/1:3,25:28:64.09:730,64,0	0/1:7,0:6:17.79:18,0,21	1/1:16,0:16:13.66:284,14,0	1/1:1,0:1:2.74:12,3,0	0/0:3,0:3:5.33:0,5,22	0/0:10,0:10:22.36:0,22,204	0/0:3,0:3:8.35:0,8,47	1/1:2,19:21:42.17:506,42,0	1/1:3,14:17:28.88:377,29,0	1/1:16,0:16:30.51:158,31,0	1/1:3,11:14:25.26:315,25,0
chr10	49006230	.	T	TAA	8577.76	PASS	AB=0.974;AC=41;AF=0.732;AN=56;BaseQRankSum=6.462;DP=443;FS=0.990;HRun=7;HaplotypeScore=83.5543;InbreedingCoeff=0.7294;MQ=62.95;MQ0=4;MQRankSum=0.654;QD=24.30;ReadPosRankSum=1.098;VQSLOD=3.9615;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:57.16:0,57,661	0/0:7,0:7:21.06:0,21,244	0/0:17,0:6:8.05:0,8,72	0/1:11,0:8:5.99:6,0,25	1/1:26,0:26:48.10:544,48,0	0/0:23,0:23:57.16:0,57,658	0/0:7,0:7:18.05:0,18,210	1/1:31,0:31:84.26:1080,84,0	0/1:14,0:14:0.12:0,0,334	1/1:27,0:27:69.80:850,70,0	1/1:17,0:17:43.21:463,43,0	1/1:1,11:12:27.09:426,27,0	1/1:1,11:12:14.62:240,15,0	1/1:15,0:16:28.89:305,29,0	0/0:14,0:14:33.07:0,33,373	1/1:13,0:13:24.07:275,24,0	1/1:23,0:23:30.89:447,31,0	1/1:27,0:27:69.19:807,69,0	0/1:11,0:7:9.73:99,0,10	1/1:20,0:21:46.61:440,47,0	1/1:1,0:1:3.01:45,3,0	1/1:0,3:3:8.99:116,9,0	1/1:4,6:10:12.04:192,12,0	1/1:0,2:2:6.02:96,6,0	1/1:21,0:21:48.13:554,48,0	1/1:17,0:17:39.12:488,39,0	1/1:23,0:20:51.17:758,51,0	1/1:14,0:14:30.09:346,30,0
chr10	49008277	.	ATGCTG	A	11982.32	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=17.407;DP=807;FS=8.848;HRun=0;HaplotypeScore=155.7735;InbreedingCoeff=0.9952;MQ=90.43;MQ0=1;MQRankSum=-11.500;QD=51.87;ReadPosRankSum=1.938;VQSLOD=4.9449;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,144,4410	0/0:14,0:14:42.14:0,42,1291	0/0:33,0:33:87.30:0,87,2557	0/0:35,0:35:99:0,102,3031	1/1:2,24:26:57.19:1187,57,0	0/0:21,0:21:63.20:0,63,1898	0/0:31,0:31:84.29:0,84,2553	1/1:3,26:29:69.22:1431,69,0	0/0:20,0:20:60.21:0,60,1875	1/1:3,25:28:72.25:1534,72,0	1/1:0,14:14:33.11:702,33,0	0/0:35,0:35:99:0,102,3114	0/0:31,1:32:29.36:0,29,2740	1/1:3,26:29:72.25:1531,72,0	0/0:31,0:31:90.30:0,90,2733	0/0:35,0:35:99:0,99,3098	1/1:0,18:18:38.73:831,39,0	1/1:0,14:14:30.10:639,30,0	0/0:17,0:17:45.15:0,45,1406	0/0:32,0:32:90.31:0,90,2810	0/0:45,0:45:99:0,129,3981	0/0:32,0:32:87.30:0,87,2720	0/0:27,0:27:72.25:0,72,2247	0/0:35,0:35:90.31:0,90,2769	1/1:0,25:25:72.20:1490,72,0	1/1:3,38:40:99:2381,114,0	0/0:48,0:48:99:0,138,4299	1/1:1,6:7:12.04:256,12,0
chr10	49009464	.	C	CT	1673.85	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-8.284;DP=522;FS=4.692;HRun=9;HaplotypeScore=76.2348;InbreedingCoeff=0.9545;MQ=73.36;MQ0=1;MQRankSum=-2.622;QD=22.02;ReadPosRankSum=0.692;VQSLOD=4.4908;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:44.97:0,45,387	0/0:12,0:12:32.99:0,33,286	0/0:23,0:16:5.29:0,5,136	0/0:21,0:18:23.82:0,24,227	0/0:37,0:37:62.77:0,63,764	0/0:17,0:17:47.99:0,48,417	0/0:6,0:6:18:0,18,156	0/0:25,0:26:58.93:0,59,501	0/0:20,0:20:50.98:0,51,443	0/0:20,1:21:20.78:0,21,409	0/0:23,0:23:59.92:0,60,509	1/1:2,12:14:10.04:339,10,0	1/1:0,15:15:30.06:321,30,0	0/0:11,0:11:26.99:0,27,234	0/0:22,0:22:60.87:0,61,523	0/0:7,0:7:21:0,21,182	0/0:24,0:24:56.97:0,57,491	0/0:25,0:25:65.98:0,66,573	0/0:18,0:20:52.04:0,52,426	0/0:21,0:21:51.42:0,51,438	0/0:11,0:11:23.99:0,24,208	1/1:1,8:9:21.02:219,21,0	1/1:2,23:25:50.31:635,50,0	1/1:1,12:13:30.08:332,30,0	0/0:20,0:20:56.92:0,57,482	0/0:29,0:29:74.96:0,75,648	0/0:24,0:24:65.95:0,66,568	0/0:8,0:8:20.99:0,21,182
chr10	49010078	.	GGT	G	8763.13	PASS	AB=0.756;AC=20;AF=0.357;AN=56;BaseQRankSum=21.153;DP=1295;FS=0.000;HRun=0;HaplotypeScore=231.2043;InbreedingCoeff=-0.5614;MQ=50.35;MQ0=83;MQRankSum=4.433;QD=8.32;ReadPosRankSum=3.008;VQSLOD=4.1736;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:35:87.30:0,87,1452	0/0:9,0:8:18.06:0,18,297	0/0:34,0:2:6.02:0,6,97	0/0:35,0:7:21.07:0,21,324	0/1:23,10:31:99:192,0,802	0/0:28,0:23:54.15:0,54,874	0/0:39,1:39:64.14:0,64,1599	0/1:45,5:31:99:132,0,627	0/0:27,1:28:43.07:0,43,1238	0/1:25,17:41:99:415,0,895	0/1:24,5:28:10.18:10,0,933	0/1:59,30:80:99:828,0,1851	0/1:47,25:71:99:735,0,1587	0/1:37,34:68:99:765,0,1339	0/0:30,0:30:63.22:0,63,1039	0/1:42,24:66:99:763,0,1114	0/1:24,26:48:99:516,0,896	0/1:30,23:53:99:394,0,907	0/1:25,9:22:99:284,0,488	0/1:24,12:33:99:348,0,580	0/1:100,61:150:99:1214,0,2607	0/1:34,9:40:99:134,0,1205	0/1:23,5:28:99:131,0,691	0/1:37,26:59:99:407,0,995	0/1:13,13:23:99:340,0,159	0/1:27,26:49:99:782,0,825	0/1:20,12:32:99:336,0,768	0/1:15,2:17:37.27:37,0,512
chr10	49010171	.	GGT	G	3166.22	PASS	AB=0.842;AC=18;AF=0.321;AN=56;BaseQRankSum=12.740;DP=1099;FS=1.610;HRun=0;HaplotypeScore=193.5032;InbreedingCoeff=-0.4809;MQ=50.75;MQ0=64;MQRankSum=1.380;QD=4.11;ReadPosRankSum=1.397;VQSLOD=3.0980;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:50:99:0,99,1643	0/0:4,0:4:12.04:0,12,197	0/0:40,0:8:12.03:0,12,167	0/0:48,0:11:14.58:0,15,154	0/0:29,1:29:45.14:0,45,724	0/0:10,0:10:30.10:0,30,500	0/0:30,1:31:41.59:0,42,1211	0/1:44,8:44:88.42:88,0,1343	0/0:21,0:21:48.14:0,48,791	0/1:29,9:37:99:285,0,786	0/1:14,3:17:83.87:84,0,337	0/1:66,14:77:99:281,0,1908	0/1:44,16:57:99:462,0,1231	0/1:42,17:56:99:408,0,1172	0/0:29,1:30:75.25:0,75,1228	0/1:40,19:57:99:456,0,1466	0/1:44,7:49:44.43:44,0,1490	0/1:38,10:48:99:220,0,1468	0/1:31,1:22:19.71:20,0,607	0/1:15,5:18:99:174,0,282	0/1:88,32:111:99:326,0,2547	0/1:22,5:25:71.99:72,0,506	0/1:23,3:23:34.17:34,0,560	0/0:53,10:59:13.36:0,13,1808	0/1:13,3:16:28.12:28,0,402	0/1:25,1:23:91.40:91,0,648	0/1:24,6:29:99:195,0,771	0/1:7,2:9:58.34:58,0,179
chr10	49010686	.	CCTTTCTTTCTTT	C	183.28	PASS	AC=4;AF=0.118;AN=34;BaseQRankSum=1.545;DP=89;FS=0.000;HRun=0;HaplotypeScore=29.6036;InbreedingCoeff=0.3924;MQ=35.48;MQ0=17;MQRankSum=-2.003;QD=36.66;ReadPosRankSum=1.030;VQSLOD=1.9264;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:12.04:0,12,465	./.	./.	./.	0/0:5,0:5:12.04:0,12,512	0/0:1,0:1:3.01:0,3,59	0/0:11,0:6:14.80:0,15,142	0/0:5,0:4:0:0,0,0	0/0:2,0:2:6.02:0,6,321	0/0:5,0:2:6.02:0,6,294	0/0:3,0:2:6.02:0,6,210	./.	./.	0/0:3,0:3:9.03:0,9,477	0/0:4,0:2:3.01:0,3,96	1/1:1,0:1:3.01:71,3,0	0/0:6,0:6:12.04:0,12,411	./.	./.	./.	./.	0/0:2,0:3:2.97:0,3,20	0/0:1,0:2:2.97:0,3,20	0/0:3,0:3:0:0,0,1	./.	0/0:2,0:2:6.02:0,6,227	1/1:0,4:3:6.02:202,6,0	./.
chr10	49010865	.	G	GA	5153.88	PASS	AB=0.538;AC=29;AF=0.518;AN=56;BaseQRankSum=-9.917;DP=412;FS=9.470;HRun=10;HaplotypeScore=41.8878;InbreedingCoeff=0.8606;MQ=72.86;MQ0=1;MQRankSum=-0.286;QD=22.51;ReadPosRankSum=0.183;VQSLOD=5.1464;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,1:19:21.94:0,22,386	0/0:4,0:4:11.99:0,12,99	0/0:15,0:11:8.93:0,9,72	0/0:15,0:10:0.90:0,1,98	1/1:3,13:17:38.89:386,39,0	0/0:18,0:18:47.93:0,48,394	0/0:23,0:23:62.90:0,63,514	1/1:8,14:22:41.89:407,42,0	0/0:14,0:14:35.93:0,36,295	1/1:3,12:15:36.06:367,36,0	0/1:1,6:7:6.60:142,0,7	0/0:13,0:13:35.96:0,36,296	0/0:16,0:16:41.94:0,42,344	1/1:2,12:14:30.08:320,30,0	0/0:9,0:8:17.97:0,18,148	1/1:2,9:11:27.07:288,27,0	1/1:1,21:23:60.02:622,60,0	1/1:3,17:21:45.07:468,45,0	1/1:1,14:15:42.11:448,42,0	1/1:7,9:16:5.39:251,5,0	1/1:2,10:12:24.06:256,24,0	0/0:10,0:10:23.95:0,24,197	0/0:13,1:14:6.97:0,7,264	0/0:13,0:13:29.94:0,30,246	1/1:2,6:9:17.88:174,18,0	1/1:3,12:15:33.07:344,33,0	1/1:2,21:25:56.64:555,57,0	1/1:2,4:6:12.03:128,12,0
chr10	49011442	.	A	ATG	2316.66	PASS	AB=1.000;AC=30;AF=0.556;AN=54;BaseQRankSum=-1.789;DP=565;FS=4.926;HRun=0;HaplotypeScore=152.3630;InbreedingCoeff=0.7663;MQ=52.83;MQ0=8;MQRankSum=1.391;QD=6.83;ReadPosRankSum=-0.680;VQSLOD=3.0582;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:39.70:0,40,312	0/0:15,0:15:26.98:0,27,251	0/0:11,0:8:5.91:0,6,49	./.	0/1:27,0:27:0.64:185,0,1	0/0:19,0:19:18.69:0,19,204	0/0:23,0:23:2.95:0,3,166	1/1:33,0:31:8.94:67,9,0	0/0:18,0:16:29.95:0,30,262	1/1:24,0:24:13.91:275,14,0	1/1:19,0:18:16:106,16,0	0/0:23,0:23:22.73:0,23,112	0/0:24,0:24:19.89:0,20,98	1/1:17,0:17:16.73:94,17,0	1/1:4,11:16:12.04:182,12,0	1/1:19,0:19:24:146,24,0	1/1:28,0:28:36.94:292,37,0	1/1:16,0:14:11.16:72,11,0	1/1:16,0:13:6.48:56,6,0	1/1:25,0:25:28.59:212,29,0	1/1:22,0:21:20.92:170,21,0	0/0:27,0:27:22.48:0,22,108	0/0:16,0:16:19.89:0,20,98	0/0:13,0:13:5.68:0,6,28	0/1:19,0:19:36.03:39,0,36	1/1:24,0:23:14.13:261,14,0	1/1:28,0:28:26.33:316,26,0	1/1:6,0:6:5.99:48,6,0
chr10	49011457	.	TGTGTGTGTGTGTGTGTGTGAGAGAGAGAGAGA	T	8117.75	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=5.469;DP=559;FS=0.670;HRun=0;HaplotypeScore=385.7987;InbreedingCoeff=0.9204;MQ=47.21;MQ0=13;MQRankSum=-8.628;QD=89.21;ReadPosRankSum=3.811;VQSLOD=2.4928;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:75.73:0,76,7887	0/0:15,0:15:45.14:0,45,4750	0/0:8,0:5:15.05:0,15,825	0/0:5,0:3:6:0,6,81	0/0:27,0:27:51.18:0,51,3969	0/0:20,0:19:45.15:0,45,4627	0/0:24,0:24:62.81:0,63,5766	0/0:24,0:22:60.17:0,60,2879	0/0:20,0:18:42:0,42,5038	0/0:25,0:24:64.24:0,64,4677	0/0:22,0:21:30.98:0,31,1911	1/1:5,13:18:24.08:2017,24,0	1/1:4,15:19:21.07:1785,21,0	0/0:20,0:20:32.48:0,32,2177	0/0:20,0:20:27.09:0,27,3031	0/0:20,0:20:39.13:0,39,3151	0/0:25,0:25:63.58:0,64,4482	0/0:15,0:13:27.05:0,27,1459	0/0:13,0:9:24.07:0,24,1170	0/0:27,0:26:44.12:0,44,4104	0/0:28,0:27:46.14:0,46,3698	1/1:8,17:25:24.08:2040,24,0	1/1:6,9:15:21.07:1767,21,0	1/1:3,10:13:6.02:510,6,0	0/0:18,0:18:30.10:0,30,2123	0/0:22,0:21:50.84:0,51,4113	0/0:32,0:32:72.37:0,72,6063	0/0:4,0:3:6.02:0,6,476
chr10	49011475	.	TGAGAGAGAGAGA	T	6224.53	PASS	AB=0.715;AC=24;AF=0.444;AN=54;BaseQRankSum=9.009;DP=543;FS=9.740;HRun=0;HaplotypeScore=212.9133;InbreedingCoeff=0.4807;MQ=53.72;MQ0=13;MQRankSum=-8.622;QD=22.07;ReadPosRankSum=3.806;VQSLOD=2.8511;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:57.20:0,57,2804	0/0:14,0:14:33.10:0,33,1610	0/0:12,0:6:9.02:0,9,298	0/0:16,0:7:3.63:0,4,210	0/1:16,7:26:80.25:297,0,80	0/0:18,0:22:33.10:0,33,1608	0/0:27,0:27:48.64:0,49,2426	1/1:11,9:19:29.94:798,30,0	0/0:21,0:20:35.96:0,36,1914	0/1:17,6:23:43:670,0,43	0/1:10,10:20:7.15:7,0,33	1/1:15,0:14:24.08:673,24,0	1/1:15,0:15:21.07:589,21,0	0/1:9,2:18:20.55:243,0,21	0/0:23,0:22:36.12:0,36,1837	0/1:9,0:19:54.32:54,0,257	0/1:20,4:26:89.06:89,0,91	1/1:7,0:10:3.01:67,3,0	0/0:8,0:6:11.83:0,12,151	0/0:22,0:23:27.74:0,28,578	0/0:29,0:29:40.30:0,40,441	1/1:19,0:19:24.08:677,24,0	1/1:12,0:12:21.07:597,21,0	1/1:12,0:12:6.02:169,6,0	1/1:8,2:18:15.05:363,15,0	1/1:12,12:24:19.42:930,19,0	0/0:17,0:28:34.62:0,35,906	./.
chr10	49012127	.	AAC	A	8658.40	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=13.675;DP=710;FS=0.664;HRun=0;HaplotypeScore=93.3151;InbreedingCoeff=1.0000;MQ=77.18;MQ0=1;MQRankSum=-1.868;QD=37.65;ReadPosRankSum=1.669;VQSLOD=7.0469;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,135,2393	0/0:14,0:14:42.14:0,42,781	0/0:18,0:18:50.64:0,51,844	0/0:24,0:24:41.08:0,41,935	0/0:22,0:22:60.21:0,60,1111	0/0:22,0:22:66.23:0,66,1236	0/0:28,0:28:84.29:0,84,1550	0/0:29,0:29:84.29:0,84,1547	0/0:27,0:27:81.28:0,81,1497	0/0:31,0:31:90.31:0,90,1674	0/0:15,0:15:42.13:0,42,755	1/1:0,25:25:72.24:1055,72,0	1/1:1,25:25:60.20:879,60,0	0/0:33,0:33:96.33:0,96,1787	0/0:36,0:36:99:0,108,2023	0/0:35,0:35:99:0,105,1901	0/0:18,0:17:51.17:0,51,919	0/0:27,0:28:61.28:0,61,1353	1/1:1,15:16:45.11:638,45,0	1/1:0,22:22:57.15:815,57,0	1/1:0,39:39:99:1634,111,0	1/1:0,21:21:57.15:813,57,0	1/1:2,27:29:75.09:1102,75,0	1/1:2,25:27:63.21:928,63,0	0/0:20,0:20:57.19:0,57,1046	0/0:19,0:19:54.19:0,54,1012	1/1:4,21:25:54.18:795,54,0	0/0:12,0:12:36.12:0,36,672
chr10	49012398	.	TGG	T	10492.51	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=8.424;DP=542;FS=1.933;HRun=10;HaplotypeScore=100.7007;InbreedingCoeff=0.9959;MQ=72.83;MQ0=0;MQRankSum=-4.130;QD=25.72;ReadPosRankSum=5.896;VQSLOD=4.6449;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:19:41.11:0,41,584	0/0:8,0:8:24.05:0,24,335	0/0:10,0:10:24.07:0,24,316	0/0:16,0:14:20.63:0,21,211	1/1:5,11:16:21.05:234,21,0	0/0:11,0:12:26.55:0,27,346	0/0:21,0:25:52.20:0,52,655	1/1:2,20:22:60.12:655,60,0	0/0:17,0:20:44.58:0,45,617	1/1:3,16:19:48.12:535,48,0	1/1:4,16:20:51.12:558,51,0	1/1:1,21:23:63.17:702,63,0	1/1:1,19:20:54.14:602,54,0	1/1:2,23:25:60.14:658,60,0	0/0:23,0:23:51.16:0,51,781	1/1:4,17:21:45.11:501,45,0	1/1:2,27:29:66.17:735,66,0	1/1:2,21:23:51.13:568,51,0	1/1:4,13:17:33.08:368,33,0	1/1:2,12:14:36.09:401,36,0	1/1:3,23:26:48.12:535,48,0	1/1:3,10:13:24.05:267,24,0	1/1:3,20:23:57.15:635,57,0	1/1:1,17:18:42.11:468,42,0	1/1:2,20:22:48.11:535,48,0	1/1:3,19:22:57.15:635,57,0	1/1:0,25:25:63.14:701,63,0	1/1:4,6:10:18.04:201,18,0
chr10	49012812	.	A	AT	2176.51	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=1.287;DP=563;FS=8.514;HRun=7;HaplotypeScore=99.7461;InbreedingCoeff=0.9989;MQ=83.34;MQ0=0;MQRankSum=-0.778;QD=26.54;ReadPosRankSum=3.244;VQSLOD=3.6827;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:87.10:0,87,828	0/0:14,0:14:42.04:0,42,394	0/0:18,0:18:35.88:0,36,318	0/0:16,1:17:38.77:0,39,335	0/0:21,0:21:57.02:0,57,535	0/0:21,0:21:51.07:0,51,492	0/0:25,0:25:69.08:0,69,655	0/0:34,0:34:81.06:0,81,759	0/0:18,0:18:51.07:0,51,487	0/0:20,0:20:57.09:0,57,548	0/0:15,0:15:42.05:0,42,399	1/1:2,16:18:51.16:613,51,0	1/1:2,16:18:38.74:471,39,0	0/0:23,0:23:66.08:0,66,628	0/0:22,0:22:63.09:0,63,604	0/0:16,0:16:45.07:0,45,435	0/0:16,0:16:39.04:0,39,370	0/0:23,0:23:66.03:0,66,616	0/0:19,0:19:51.07:0,51,492	0/0:17,0:17:42.07:0,42,406	0/0:30,0:31:86.13:0,86,803	1/1:0,12:12:36.11:435,36,0	1/1:5,8:13:21.06:253,21,0	1/1:3,18:21:48.15:579,48,0	0/0:18,0:18:54.02:0,54,509	0/0:21,0:21:60.06:0,60,568	0/0:24,0:24:69.05:0,69,651	0/0:15,0:15:45.04:0,45,427
chr10	49014570	.	GGAA	G	227.56	PASS	AB=0.886;AC=7;AF=0.135;AN=52;BaseQRankSum=4.615;DP=407;FS=2.189;HRun=0;HaplotypeScore=46.4684;InbreedingCoeff=-0.1928;MQ=39.04;MQ0=123;MQRankSum=-4.419;QD=1.85;ReadPosRankSum=-4.063;VQSLOD=0.4074;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,1:11:30.10:0,30,640	0/0:7,0:7:18.06:0,18,402	./.	./.	0/0:7,0:7:18.06:0,18,402	0/1:4,3:6:33.81:34,0,253	0/1:19,2:17:64.65:65,0,522	0/0:15,0:8:18.06:0,18,395	0/1:13,1:10:24.89:25,0,424	0/0:13,0:10:27.09:0,27,603	0/0:7,0:7:18.06:0,18,401	0/0:19,0:12:33.11:0,33,703	0/0:8,0:4:12.04:0,12,252	0/0:18,0:17:42.13:0,42,896	0/1:18,5:19:99:107,0,588	0/1:28,2:17:21.88:22,0,509	0/0:30,0:24:69.24:0,69,1474	0/1:19,0:14:64.42:64,0,553	0/0:15,0:1:3.01:0,3,67	0/0:3,0:3:3.01:0,3,67	0/0:38,0:15:24.07:0,24,477	0/0:7,0:6:15.05:0,15,335	0/0:9,0:8:16.30:0,16,391	0/0:17,0:11:23.89:0,24,455	0/0:2,0:2:6.02:0,6,134	0/0:7,0:6:15.05:0,15,328	0/1:8,1:4:36.82:37,0,164	0/0:3,0:2:3.01:0,3,67
chr10	49014627	.	GGAA	G	38.97	PASS	AB=0.752;AC=2;AF=0.040;AN=50;BaseQRankSum=2.650;DP=532;FS=0.000;HRun=0;HaplotypeScore=54.1708;InbreedingCoeff=-0.0842;MQ=23.32;MQ0=199;MQRankSum=-0.530;QD=1.22;ReadPosRankSum=1.572;VQSLOD=1.3315;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	0/0:18,0:8:21.03:0,21,408	./.	./.	0/0:20,0:18:33.79:0,34,633	0/0:5,0:3:5.98:0,6,87	0/0:11,1:5:9.03:0,9,173	0/0:17,0:6:18.06:0,18,395	0/1:6,10:12:85.88:86,0,122	0/0:8,0:6:18.06:0,18,401	0/0:10,0:9:18.06:0,18,397	0/0:24,0:11:19.24:0,19,479	0/0:18,0:1:3.01:0,3,62	0/0:31,0:19:45.15:0,45,976	0/0:20,1:11:21.03:0,21,421	0/1:14,2:8:39.94:40,0,124	0/0:35,0:22:51.17:0,51,1115	0/0:25,0:14:30.10:0,30,661	0/0:16,0:3:6.02:0,6,134	0/0:16,0:9:21.07:0,21,389	0/0:47,0:8:11.39:0,11,66	0/0:17,0:10:15.05:0,15,281	0/0:23,0:10:14.55:0,15,343	0/0:29,0:11:0.98:0,1,303	0/0:11,0:9:15.05:0,15,334	0/0:18,0:13:36.12:0,36,790	0/0:16,1:10:18.06:0,18,399	0/0:4,0:2:3.01:0,3,67
chr10	49014987	.	G	GGAA	183.63	PASS	AB=0.955;AC=5;AF=0.313;AN=16;BaseQRankSum=-0.667;DP=237;FS=15.091;HRun=0;HaplotypeScore=15.6426;MQ=10.84;MQ0=154;MQRankSum=1.867;QD=4.48;ReadPosRankSum=-1.467;VQSLOD=-0.2790;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:15,0:2:3.01:0,3,49	0/0:17,0:6:12.04:0,12,167	./.	./.	./.	./.	./.	./.	./.	0/1:20,1:7:25.18:132,0,25	./.	./.	0/0:35,0:9:2.89:0,3,49	./.	1/1:3,2:4:3.01:67,3,0	./.	./.	./.	./.	0/0:13,0:2:3.01:0,3,49	0/0:8,0:1:3.01:0,3,49	1/1:10,5:5:3.01:67,3,0	./.	./.	./.	./.
chr10	49015552	.	G	GC	12753.07	PASS	AB=0.599;AC=38;AF=0.679;AN=56;BaseQRankSum=4.695;DP=612;FS=30.815;HRun=1;HaplotypeScore=70.5502;InbreedingCoeff=0.3484;MQ=62.12;MQ0=95;MQRankSum=-5.109;QD=24.72;ReadPosRankSum=5.543;VQSLOD=3.2153;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:21:48.15:0,48,612	0/0:6,0:4:12.03:0,12,138	0/0:13,0:13:38.91:0,39,421	0/0:14,0:14:36.93:0,37,403	0/1:4,8:8:14.69:289,0,15	1/1:2,9:9:24.08:356,24,0	1/1:5,26:26:60.20:891,60,0	0/1:2,18:14:35.66:454,0,36	1/1:2,10:12:27.09:402,27,0	0/1:19,18:19:99:531,0,101	0/1:2,11:12:17.75:246,0,18	1/1:9,28:23:63.21:937,63,0	1/1:10,17:21:54.18:802,54,0	1/1:6,17:16:48.16:716,48,0	0/0:37,0:25:60.13:0,60,749	1/1:0,10:10:30.10:445,30,0	1/1:8,23:21:36.12:537,36,0	1/1:8,10:10:18.06:269,18,0	0/1:5,11:12:39.63:392,0,40	0/1:10,11:13:86.61:273,0,87	1/1:5,54:47:99:1695,114,0	0/1:5,14:13:2.66:456,0,3	0/1:4,6:8:53.43:234,0,53	1/1:4,24:24:66.17:986,66,0	1/1:4,13:12:33.11:489,33,0	1/1:13,20:18:15.28:682,15,0	1/1:10,17:16:39.13:581,39,0	1/1:0,4:4:6.02:90,6,0
chr10	49017450	.	AT	A	3444.28	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=11.236;DP=620;FS=2.317;HRun=5;HaplotypeScore=61.7306;InbreedingCoeff=0.9999;MQ=85.81;MQ0=0;MQRankSum=-1.902;QD=31.03;ReadPosRankSum=1.020;VQSLOD=4.3478;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,123,1682	0/0:12,0:12:36.12:0,36,493	0/0:22,0:22:62.68:0,63,804	0/0:18,0:18:45.12:0,45,563	0/0:28,0:28:81.25:0,81,1078	0/0:21,0:21:60.19:0,60,804	0/0:29,0:29:87.28:0,87,1175	0/0:22,0:22:60.20:0,60,821	0/0:15,0:15:45.15:0,45,615	0/0:22,0:22:60.19:0,60,802	0/0:24,0:24:72.22:0,72,954	0/0:17,0:17:51.16:0,51,683	0/0:16,0:16:45.15:0,45,614	0/0:23,0:23:69.22:0,69,929	0/0:21,0:21:57.19:0,57,780	0/0:23,0:23:69.23:0,69,943	0/0:26,0:26:69.23:0,69,944	0/0:21,0:21:57.19:0,57,780	1/1:5,25:30:78.13:858,78,0	1/1:0,24:24:69.20:783,69,0	1/1:0,26:26:75.21:851,75,0	0/0:13,0:13:36.11:0,36,477	0/0:14,0:14:39.13:0,39,534	0/0:21,0:21:60.20:0,60,816	0/0:13,0:13:39.12:0,39,519	0/0:27,0:27:81.25:0,81,1091	1/1:0,31:31:84.24:953,84,0	0/0:18,0:18:54.18:0,54,739
chr10	49017773	.	C	CT	5798.14	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=-11.910;DP=594;FS=0.352;HRun=6;HaplotypeScore=59.2608;InbreedingCoeff=0.9413;MQ=80.44;MQ0=0;MQRankSum=-3.635;QD=27.74;ReadPosRankSum=1.458;VQSLOD=5.3844;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,111,1119	0/0:11,0:11:33.07:0,33,336	0/1:11,0:11:4.06:4,0,134	0/0:20,0:20:32.69:0,33,299	0/0:17,0:17:42.09:0,42,429	0/0:19,0:19:57.11:0,57,574	0/0:17,0:17:48.11:0,48,489	0/0:45,0:45:99:0,111,1122	0/0:18,0:18:51.11:0,51,520	0/0:23,0:23:63.14:0,63,642	0/0:24,0:24:69.13:0,69,691	1/1:4,17:21:45.14:566,45,0	1/1:3,14:17:30.09:377,30,0	0/0:26,0:26:72.16:0,72,734	0/0:21,0:21:57.12:0,57,581	0/0:27,0:27:69.15:0,69,703	0/0:20,0:20:51.11:0,51,520	0/0:22,0:22:57.12:0,57,581	1/1:2,19:21:57.18:713,57,0	1/1:4,25:29:72.23:899,72,0	1/1:1,22:23:60.19:755,60,0	1/1:1,15:16:42.13:523,42,0	1/1:3,17:20:47.99:602,48,0	1/1:5,11:16:27.09:340,27,0	0/0:10,0:10:27.06:0,27,275	0/0:20,0:20:51.11:0,51,520	1/1:7,27:35:81.26:1018,81,0	0/0:7,0:7:21.05:0,21,214
chr10	49017959	.	A	AT	10901.95	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-0.911;DP=771;FS=1.673;HRun=1;HaplotypeScore=160.8875;InbreedingCoeff=0.9493;MQ=90.16;MQ0=0;MQRankSum=-9.579;QD=15.31;ReadPosRankSum=3.869;VQSLOD=5.1887;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:55,0:55:99:789,148,0	1/1:13,0:13:36.99:204,37,0	0/0:23,1:24:17.44:0,17,445	0/0:32,3:35:12.86:0,13,648	1/1:41,0:41:99:571,108,0	1/1:28,0:28:76.02:393,76,0	1/1:29,0:29:80.13:499,80,0	1/1:27,0:27:76.22:561,76,0	1/1:31,0:31:80.94:394,81,0	1/1:20,0:20:32.01:376,32,0	1/1:28,0:28:68.27:369,68,0	1/1:20,0:20:54.71:281,55,0	1/1:26,0:26:51.71:304,52,0	1/1:30,0:30:75.89:493,76,0	1/1:23,0:23:65.39:389,65,0	1/1:24,0:24:69.53:414,70,0	1/1:37,1:38:99:582,104,0	1/1:16,0:16:42.37:249,42,0	1/1:27,0:27:67.88:454,68,0	1/1:29,0:29:82.28:493,82,0	1/1:36,0:36:99:497,102,0	1/1:19,0:19:51.35:313,51,0	1/1:20,0:20:56.81:324,57,0	1/1:36,0:36:75.29:459,75,0	1/1:30,0:30:85.76:443,86,0	1/1:28,0:28:64.19:502,64,0	1/1:34,0:33:85.73:481,86,0	1/1:4,0:4:8.53:68,9,0
chr10	49019497	.	T	TACTGTTGAACCTTTGGGTCTCCCG	36055.75	PASS	AB=0.669;AC=54;AF=0.964;AN=56;BaseQRankSum=-0.273;DP=238;FS=30.989;HRun=0;HaplotypeScore=230.4830;InbreedingCoeff=-0.0481;MQ=87.19;MQ0=0;MQRankSum=-2.624;QD=151.49;ReadPosRankSum=2.727;VQSLOD=3.0306;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:11:21.07:1690,21,0	1/1:5,0:5:14.08:650,14,0	0/1:4,0:9:14.23:1406,0,14	0/1:9,1:16:14.27:1910,0,14	1/1:9,0:9:15.05:832,15,0	1/1:9,0:9:24.08:1598,24,0	1/1:7,0:7:21.07:1216,21,0	1/1:11,0:11:30.10:1925,30,0	1/1:10,0:10:19.62:1206,20,0	1/1:8,0:8:24.08:1568,24,0	1/1:9,0:9:18.06:1243,18,0	1/1:9,0:9:24.08:1500,24,0	1/1:11,0:11:27.06:2134,27,0	1/1:7,0:7:15.05:1153,15,0	1/1:8,0:8:22.89:1266,23,0	1/1:15,0:15:33.11:2370,33,0	1/1:11,0:11:21.07:1375,21,0	1/1:5,0:5:12.04:713,12,0	1/1:5,0:5:15.05:1320,15,0	1/1:12,0:12:30.10:1731,30,0	1/1:7,0:7:15.05:562,15,0	1/1:7,0:7:18.06:1132,18,0	1/1:6,0:6:12.04:585,12,0	1/1:7,0:7:15.05:989,15,0	1/1:6,0:6:15.05:1118,15,0	1/1:9,0:9:27.09:1878,27,0	1/1:7,0:7:17.27:912,17,0	1/1:2,0:2:6:72,6,0
chr10	49019498	.	A	ACTGTTGAACCTTTGGGTCTCCC	1977.93	PASS	AB=0.722;AC=6;AF=0.75;AN=8;BaseQRankSum=-1.185;DP=35;FS=6.107;HRun=0;HaplotypeScore=32.9671;MQ=178.82;MQ0=0;MQRankSum=-2.014;QD=98.90;ReadPosRankSum=-0.237;VQSLOD=1.8416;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/1:5,0:7:20.25:827,0,20	0/1:5,1:10:31.55:1096,0,32	./.	./.	./.	./.	./.	1/1:1,0:1:3.01:57,3,0	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	1/1:2,0:2:6:72,6,0
chr10	49021004	.	TC	T	2110.39	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=8.823;DP=573;FS=6.902;HRun=6;HaplotypeScore=60.2460;InbreedingCoeff=0.9844;MQ=81.66;MQ0=0;MQRankSum=-4.422;QD=23.71;ReadPosRankSum=4.004;VQSLOD=3.0496;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,108,1360	0/0:6,0:6:9.03:0,9,118	0/0:24,0:23:56.08:0,56,675	0/0:19,0:18:45.09:0,45,529	0/0:17,0:17:48.09:0,48,570	0/0:18,0:18:48.14:0,48,616	0/0:15,0:15:33.10:0,33,420	0/0:27,0:27:66.16:0,66,791	0/0:19,0:19:51.09:0,51,608	0/0:14,0:14:39.11:0,39,488	0/0:12,0:12:33.11:0,33,434	1/1:0,17:17:42.11:451,42,0	1/1:1,25:26:60.15:644,60,0	0/0:27,0:27:81.23:0,81,1035	0/0:23,0:23:66.19:0,66,838	0/0:21,0:21:57.19:0,57,750	0/0:30,0:30:72.19:0,72,903	0/0:31,0:31:84.26:0,84,1083	0/0:18,0:18:51.04:0,51,584	0/0:20,0:20:54.13:0,54,655	0/0:32,0:32:90.25:0,90,1138	1/1:3,12:15:30.07:321,30,0	1/1:1,6:7:18.05:193,18,0	1/1:3,21:24:63.16:677,63,0	0/0:21,0:21:60.17:0,60,760	0/0:18,0:18:48.11:0,48,568	0/0:18,0:18:48.16:0,48,630	0/0:14,0:14:39.13:0,39,512
chr10	49021649	.	C	CGTGTGTGCACAT	1179.75	PASS	AB=0.777;AC=6;AF=0.107;AN=56;BaseQRankSum=-2.755;DP=768;FS=1.104;HRun=0;HaplotypeScore=284.3274;InbreedingCoeff=0.5715;MQ=64.92;MQ0=5;MQRankSum=-1.178;QD=11.92;ReadPosRankSum=-0.578;VQSLOD=2.1528;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,117,2806	0/0:10,0:10:21.07:0,21,473	0/0:32,0:17:24.08:0,24,404	0/0:36,0:19:13.90:0,14,318	0/0:30,0:30:40.31:0,40,573	1/1:19,0:19:12.04:232,12,0	1/1:32,0:32:3.78:167,4,0	0/0:41,0:41:66.11:0,66,1247	0/1:5,14:26:5.83:868,0,6	0/0:36,0:36:44.56:0,45,700	0/0:20,0:20:23.01:0,23,286	0/0:30,0:30:63.17:0,63,1426	0/0:29,0:29:60.21:0,60,1419	0/0:37,0:37:49.57:0,50,696	0/0:28,0:28:60.18:0,60,1600	0/1:22,0:22:35.51:36,0,780	0/0:33,0:33:59.99:0,60,918	0/0:31,0:31:54.80:0,55,701	0/0:13,0:13:24.08:0,24,535	0/0:30,0:30:48.12:0,48,1282	0/0:33,0:33:75.18:0,75,1788	0/0:33,0:33:60.08:0,60,1332	0/0:16,0:16:30.10:0,30,708	0/0:31,0:31:65.77:0,66,1396	0/0:19,0:19:17.26:0,17,210	0/0:23,0:23:39.66:0,40,677	0/0:20,0:20:48.16:0,48,1205	0/0:6,0:6:11.24:0,11,99
chr10	49021660	.	A	ATGTG	4720.96	PASS	AB=0.833;AC=22;AF=0.407;AN=54;BaseQRankSum=-5.807;DP=787;FS=3.688;HRun=0;HaplotypeScore=168.9066;InbreedingCoeff=0.7618;MQ=57.54;MQ0=11;MQRankSum=-1.393;QD=14.01;ReadPosRankSum=-0.452;VQSLOD=4.3636;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:51:60.09:0,60,808	0/0:11,0:12:18.04:0,18,240	./.	0/0:36,0:15:3.01:0,3,38	1/1:13,17:32:20.73:501,21,0	0/0:21,0:20:11.72:0,12,190	0/0:33,0:33:5.64:0,6,95	1/1:39,3:41:20.80:389,21,0	0/1:30,0:30:99:193,0,273	1/1:20,6:33:38.04:513,38,0	1/1:7,11:24:17.18:309,17,0	0/0:10,0:32:45.05:0,45,418	0/0:13,0:29:38.16:0,38,362	1/1:16,16:34:24.02:455,24,0	0/0:22,0:24:45.12:0,45,692	1/1:11,0:21:21.96:98,22,0	0/1:17,15:34:31.11:569,0,31	1/1:17,15:33:36.01:768,36,0	0/0:15,0:14:6.01:0,6,74	0/0:29,0:29:36.11:0,36,548	0/0:33,0:35:48.13:0,48,694	0/0:16,0:30:35.84:0,36,335	0/0:8,0:16:17.45:0,17,186	0/0:16,0:33:39.52:0,40,364	1/1:9,8:19:8.54:214,9,0	1/1:19,6:26:25.50:498,26,0	0/0:23,0:23:30.08:0,30,453	1/1:4,3:8:9.03:215,9,0
chr10	49021668	.	G	GCACA	209.37	PASS	AB=0.892;AC=3;AF=0.054;AN=56;BaseQRankSum=2.897;DP=782;FS=1.370;HRun=0;HaplotypeScore=176.3121;InbreedingCoeff=-0.0606;MQ=55.06;MQ0=11;MQRankSum=-3.171;QD=2.83;ReadPosRankSum=3.528;VQSLOD=2.6531;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:61,0:60:99:0,154,3160	0/0:12,0:12:33.11:0,33,658	0/0:30,0:12:30.09:0,30,522	0/0:37,0:15:38.63:0,39,667	0/0:34,0:34:48.09:0,48,746	0/1:11,10:20:59.85:60,0,418	0/0:30,0:30:8.65:0,9,189	0/0:40,0:38:99:0,108,2025	0/1:29,0:29:99:226,0,400	0/0:25,0:25:73.52:0,74,1245	0/0:24,0:24:27.86:0,28,481	0/0:34,0:34:78.22:0,78,1189	0/0:27,0:27:75.24:0,75,1177	0/0:33,0:33:55.01:0,55,864	0/0:25,0:25:69.21:0,69,1378	0/1:24,0:24:23.47:23,0,1013	0/0:34,0:34:78.16:0,78,1256	0/0:33,0:33:72.08:0,72,1080	0/0:15,0:14:39.13:0,39,720	0/0:26,0:26:63.22:0,63,1288	0/0:37,0:37:93.25:0,93,1829	0/0:30,0:29:63.01:0,63,970	0/0:17,0:17:36.10:0,36,589	0/0:33,0:33:78.71:0,79,1301	0/0:18,0:18:20.89:0,21,319	0/0:26,0:26:75.13:0,75,1300	0/0:20,0:20:60.20:0,60,1212	0/0:7,0:7:11.14:0,11,172
chr10	49024114	.	GCACA	G	1709.66	PASS	AB=0.846;AC=27;AF=0.614;AN=44;BaseQRankSum=1.982;DP=457;FS=31.342;HRun=0;HaplotypeScore=140.1773;InbreedingCoeff=0.6618;MQ=41.12;MQ0=28;MQRankSum=-1.941;QD=8.72;ReadPosRankSum=3.773;VQSLOD=1.3455;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:16,7:20:6.02:93,6,0	0/0:8,0:7:2.04:0,2,6	./.	./.	1/1:9,5:16:15.52:214,16,0	./.	1/1:6,0:11:2.99:24,3,0	0/0:13,0:13:0.47:0,0,1	1/1:8,0:13:12.01:112,12,0	1/1:11,5:15:18.02:253,18,0	1/1:6,3:10:9.02:120,9,0	0/0:16,0:19:12.04:0,12,232	0/0:16,0:23:27:0,27,401	1/1:10,4:14:9.03:139,9,0	0/0:24,0:27:23.82:0,24,429	0/1:9,0:11:14.07:14,0,147	1/1:2,8:10:15.05:231,15,0	1/1:9,4:13:6.44:134,6,0	1/1:20,0:21:3:28,3,0	./.	./.	0/0:19,0:20:15.05:0,15,268	0/0:10,0:14:11.07:0,11,174	0/0:10,0:17:8.06:0,8,97	1/1:8,5:15:15.04:195,15,0	1/1:11,5:16:15.05:231,15,0	1/1:2,0:6:9.01:84,9,0	./.
chr10	49025781	.	CCGTGTGAGCATGTCCATGAGAGTTTGCT	C	294.34	PASS	AB=0.935;AC=5;AF=0.125;AN=40;BaseQRankSum=5.587;DP=619;FS=14.720;HRun=0;HaplotypeScore=97.7375;InbreedingCoeff=-0.0810;MQ=22.87;MQ0=167;MQRankSum=-3.187;QD=2.65;ReadPosRankSum=-0.858;VQSLOD=1.0161;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:17:18.06:0,18,940	0/0:8,0:3:6.02:0,6,223	./.	./.	0/0:24,0:8:9.03:0,9,322	./.	0/0:14,0:3:3.01:0,3,128	0/1:11,10:12:99:272,0,171	./.	0/0:24,0:8:24.06:0,24,1092	0/0:17,0:9:9.03:0,9,334	0/0:26,0:14:5.77:0,6,33	0/0:15,0:5:3.01:0,3,38	0/0:52,0:23:14.55:0,15,421	0/0:52,0:20:23.73:0,24,622	0/0:30,0:11:17.43:0,17,252	0/0:24,0:13:12:0,12,499	0/0:18,0:9:6.02:0,6,328	./.	./.	0/1:24,0:8:0:0,0,0	./.	0/1:21,0:7:38.67:39,0,378	0/0:18,0:10:12:0,12,183	0/0:30,0:13:6.01:0,6,156	0/1:26,0:10:73.85:74,0,868	0/1:19,0:14:5.99:6,0,65	./.
chr10	49026200	.	CCGTGTGAGCATGTCCATGAGAGTTTGCT	C	437.84	PASS	AB=0.930;AC=7;AF=0.135;AN=52;BaseQRankSum=5.713;DP=1235;FS=0.000;HRun=0;HaplotypeScore=512.7811;InbreedingCoeff=-0.1569;MQ=32.63;MQ0=202;MQRankSum=-4.092;QD=1.39;ReadPosRankSum=-4.426;VQSLOD=-0.6627;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:78,0:71:99:0,140,6258	0/0:16,0:15:45.10:0,45,2207	./.	./.	0/1:31,0:20:11.55:12,0,325	0/0:31,0:25:33.11:0,33,1107	0/0:59,0:39:86.92:0,87,2274	0/1:36,7:34:99:287,0,549	0/0:70,0:61:98.87:0,99,3028	0/0:45,0:24:25.78:0,26,1479	0/0:20,11:22:23.95:0,24,555	0/0:51,0:40:65.35:0,65,2881	0/0:49,0:40:70.27:0,70,2572	0/0:38,0:29:35.97:0,36,739	0/0:59,0:51:99:0,135,5422	0/0:36,0:30:41.69:0,42,1125	0/0:68,0:51:99:0,100,5232	0/0:50,0:40:59.19:0,59,3480	0/1:21,0:8:4:4,0,512	0/1:18,21:33:64.25:64,0,801	0/1:120,0:49:7.11:7,0,2224	0/0:18,13:23:8.86:0,9,216	0/1:12,0:9:24.93:25,0,183	0/0:53,0:46:47.20:0,47,2315	0/1:50,0:35:99:159,0,919	0/0:47,0:34:39.89:0,40,2604	0/0:17,0:8:8.95:0,9,199	0/0:3,0:3:3.01:0,3,124
chr10	49027283	.	GT	G	7696.46	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=13.518;DP=636;FS=3.151;HRun=2;HaplotypeScore=65.8170;InbreedingCoeff=0.9996;MQ=78.88;MQ0=0;MQRankSum=-2.463;QD=35.47;ReadPosRankSum=-1.009;VQSLOD=4.8563;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,123,1741	0/0:8,0:8:24.08:0,24,357	0/0:23,0:23:63.12:0,63,895	0/0:26,0:26:35.68:0,36,858	1/1:1,24:25:54.18:701,54,0	0/0:15,0:15:45.15:0,45,674	0/0:21,0:21:63.21:0,63,944	1/1:0,35:35:96.30:1231,96,0	0/0:20,0:20:57.19:0,57,853	1/1:0,24:24:66.18:824,66,0	1/1:0,14:14:39.13:506,39,0	0/0:24,0:24:66.21:0,66,970	0/0:26,0:26:72.23:0,72,1050	1/1:0,23:23:66.21:857,66,0	0/0:42,0:42:99:0,123,1765	0/0:21,0:21:63.20:0,63,923	1/1:1,18:19:53.95:701,54,0	1/1:2,22:24:66.21:857,66,0	0/0:18,0:18:54.17:0,54,788	0/0:15,0:15:42.14:0,42,630	0/0:30,0:30:90.27:0,90,1306	0/0:11,0:11:30.10:0,30,440	0/0:17,0:17:48.16:0,48,719	0/0:29,0:29:84.27:0,84,1235	1/1:0,19:19:57.18:736,57,0	1/1:0,18:18:54.18:700,54,0	0/0:30,0:30:87.29:0,87,1303	1/1:1,15:16:45.15:584,45,0
chr10	49027548	.	ATATGTATG	A	5607.59	PASS	AB=0.799;AC=26;AF=0.500;AN=52;BaseQRankSum=2.843;DP=630;FS=1.669;HRun=0;HaplotypeScore=166.3354;InbreedingCoeff=0.7989;MQ=57.06;MQ0=10;MQRankSum=-10.005;QD=17.10;ReadPosRankSum=0.218;VQSLOD=4.3644;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:50:54.08:0,54,1448	0/0:5,0:5:6:0,6,106	./.	./.	1/1:12,13:24:12.04:277,12,0	1/1:5,1:29:27.09:513,27,0	1/1:6,0:16:3.01:56,3,0	1/1:26,0:21:11.93:97,12,0	1/1:5,0:22:24.08:447,24,0	1/1:14,16:30:45.09:877,45,0	1/1:17,12:29:15.05:351,15,0	0/0:6,0:19:26.94:0,27,221	0/0:10,0:23:23.95:0,24,196	1/1:12,14:26:24.08:603,24,0	0/0:13,0:28:48.10:0,48,1246	1/1:10,0:17:9.03:167,9,0	0/1:15,10:26:4.94:282,0,5	1/1:12,10:22:15.05:299,15,0	0/0:12,0:12:19.88:0,20,713	0/0:26,0:27:49.04:0,49,1535	0/0:20,0:19:45.12:0,45,1478	0/0:4,0:14:29.94:0,30,244	0/0:13,0:27:23.81:0,24,196	0/0:7,0:28:35.92:0,36,294	1/1:12,20:32:30.10:754,30,0	1/1:5,16:21:41.98:838,42,0	0/0:24,0:24:48.61:0,49,1620	0/1:6,1:7:47.69:48,0,107
chr10	49029157	.	C	CTT	4873.91	PASS	AB=0.600;AC=35;AF=0.648;AN=54;BaseQRankSum=-1.427;DP=341;FS=12.048;HRun=9;HaplotypeScore=42.3915;InbreedingCoeff=0.8212;MQ=64.88;MQ0=6;MQRankSum=-1.902;QD=20.57;ReadPosRankSum=0.718;VQSLOD=1.8658;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:83.18:0,83,847	0/0:6,0:6:12.02:0,12,127	0/0:9,0:8:6.42:0,6,52	0/0:15,0:9:8.56:0,9,73	1/1:1,10:12:27.01:343,27,0	1/1:1,0:14:19.96:68,20,0	1/1:2,0:10:20.16:78,20,0	1/1:11,23:33:62.93:820,63,0	1/1:0,0:6:12.48:43,12,0	1/1:3,12:15:33.06:464,33,0	1/1:2,8:11:24.04:333,24,0	0/1:2,0:4:15.18:15,0,21	1/1:0,0:7:12.48:43,12,0	1/1:1,6:7:15.05:231,15,0	0/0:5,0:5:15.04:0,15,158	1/1:4,0:7:2.50:9,2,0	1/1:2,20:23:51.14:759,51,0	1/1:2,13:15:27.06:391,27,0	0/0:12,0:11:33.08:0,33,351	0/0:5,0:5:15.04:0,15,159	0/0:9,0:9:23.65:0,24,232	./.	1/1:0,0:3:2.50:9,2,0	1/1:0,0:18:37.43:128,37,0	1/1:3,11:15:36.58:519,37,0	1/1:0,8:8:24.07:332,24,0	0/0:10,0:10:30.05:0,30,304	1/1:1,11:12:21.06:288,21,0
chr10	49030852	.	CT	C	1677.95	PASS	AB=0.859;AC=29;AF=0.518;AN=56;BaseQRankSum=7.738;DP=576;FS=18.335;HRun=15;HaplotypeScore=76.6306;InbreedingCoeff=0.4975;MQ=76.10;MQ0=5;MQRankSum=0.961;QD=4.82;ReadPosRankSum=4.627;VQSLOD=0.6629;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:30:30.68:0,31,409	0/0:9,1:10:1.72:0,2,136	0/0:40,1:23:30.98:0,31,205	0/0:22,0:9:5.24:0,5,22	0/1:27,5:34:5.88:6,0,400	1/1:3,12:17:33.57:204,34,0	1/1:3,11:15:31.56:198,32,0	0/0:22,0:24:13.36:0,13,205	1/1:6,11:17:29.52:192,30,0	0/1:14,3:19:8.87:9,0,152	0/1:10,1:11:2.49:2,0,87	1/1:4,7:11:14.72:96,15,0	1/1:5,14:20:11.09:191,11,0	0/1:18,1:19:8.42:8,0,176	0/1:21,4:25:20.87:21,0,317	0/0:18,0:18:10.53:0,11,194	0/0:22,1:25:33.83:0,34,429	0/0:16,1:18:16.64:0,17,251	1/1:9,1:27:36.53:115,37,0	1/1:7,1:24:28.58:93,29,0	0/1:5,0:8:4.68:5,0,17	1/1:9,10:22:6.21:145,6,0	1/1:0,12:13:37.51:236,38,0	1/1:1,11:13:28.62:179,29,0	0/0:30,1:31:45.60:0,46,475	0/1:21,6:27:26.09:26,0,289	1/1:4,2:25:41.44:150,41,0	0/0:8,0:8:14.96:0,15,125
chr10	49032840	.	G	GCA	6627.98	PASS	AB=0.644;AC=17;AF=0.304;AN=56;BaseQRankSum=-4.268;DP=893;FS=16.332;HRun=0;HaplotypeScore=165.5583;InbreedingCoeff=0.7103;MQ=65.59;MQ0=8;MQRankSum=1.490;QD=25.30;ReadPosRankSum=-0.638;VQSLOD=4.3136;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,104,1278	0/0:15,0:16:41.95:0,42,476	0/0:49,0:33:18.82:0,19,413	0/0:53,0:37:51.29:0,51,504	1/1:6,13:19:18.06:292,18,0	0/0:18,0:19:41.45:0,41,462	0/0:39,0:39:90.25:0,90,1074	1/1:17,24:43:5.21:1049,5,0	0/0:30,0:30:59.70:0,60,709	1/1:8,19:27:27.12:880,27,0	0/1:10,14:24:9.57:362,0,10	0/0:42,0:40:93.29:0,93,1135	0/0:29,0:29:66.21:0,66,806	0/1:18,14:32:74.54:830,0,75	0/0:34,0:33:81.23:0,81,976	0/0:24,0:24:60.01:0,60,698	1/1:9,17:26:26.49:929,26,0	1/1:4,16:19:31.16:531,31,0	0/0:4,0:15:4.47:0,4,82	0/0:1,0:22:45.45:0,45,223	0/0:12,0:80:99:0,119,574	0/0:24,0:24:63.20:0,63,768	0/0:26,0:26:63.03:0,63,744	0/0:59,0:60:99:0,118,1584	0/1:9,17:26:27.93:586,0,28	1/1:14,21:34:63.12:931,63,0	0/0:5,0:19:36.93:0,37,181	1/1:7,3:10:18.03:238,18,0
chr10	49032849	.	CACACACAT	C	4274.90	PASS	AB=0.988;AC=14;AF=0.250;AN=56;BaseQRankSum=3.451;DP=941;FS=23.198;HRun=0;HaplotypeScore=268.5178;InbreedingCoeff=0.4162;MQ=54.09;MQ0=16;MQRankSum=1.506;QD=15.95;ReadPosRankSum=-0.152;VQSLOD=2.2772;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,115,3582	0/0:18,0:18:48.15:0,48,1365	0/0:47,0:26:44.88:0,45,1044	0/0:58,0:32:60.42:0,60,976	1/1:24,2:26:16.28:205,16,0	0/0:22,0:22:27.34:0,27,1389	0/0:43,0:42:93.12:0,93,2974	0/1:41,0:38:99:406,0,168	0/0:32,0:31:64.46:0,64,2097	0/1:29,0:27:35.98:528,0,36	0/1:20,1:21:59.45:195,0,59	0/0:45,0:42:96.85:0,97,3002	0/0:29,0:29:51.74:0,52,2372	0/1:33,1:34:99:699,0,214	0/0:34,0:33:78.25:0,78,2880	0/0:25,0:25:57.35:0,57,1980	1/1:25,0:25:15.21:603,15,0	1/1:20,0:19:14.74:482,15,0	0/0:23,0:21:43.95:0,44,749	0/0:27,0:27:51.16:0,51,1035	0/0:81,0:79:99:0,126,2662	0/0:28,0:28:63.12:0,63,1859	0/0:28,0:27:66.22:0,66,1881	0/0:64,0:64:99:0,116,4670	0/1:27,0:27:99:352,0,129	0/1:33,0:32:32.52:560,0,33	0/0:19,0:18:26.18:0,26,862	1/1:12,0:12:18.50:244,18,0
chr10	49032874	.	ACG	A	1010.25	PASS	AB=0.875;AC=8;AF=0.143;AN=56;BaseQRankSum=3.292;DP=942;FS=29.268;HRun=0;HaplotypeScore=204.3701;InbreedingCoeff=-0.1689;MQ=46.46;MQ0=31;MQRankSum=-1.352;QD=5.03;ReadPosRankSum=-5.712;VQSLOD=0.3585;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:45:96.89:0,97,1771	0/0:15,0:15:42.14:0,42,781	0/0:48,1:13:32.96:0,33,518	0/0:60,2:8:21.05:0,21,368	0/0:12,9:21:14.98:0,15,156	0/1:25,0:25:14.58:15,0,650	0/0:47,0:45:37.71:0,38,1354	0/0:31,3:24:11.58:0,12,553	0/0:32,0:31:35.70:0,36,933	0/1:30,4:32:99:353,0,268	0/1:17,2:19:83.70:84,0,195	0/0:46,0:43:70.55:0,71,1417	0/0:32,0:32:74.69:0,75,1262	0/1:19,12:30:99:99,0,400	0/0:33,0:31:70.82:0,71,1448	0/0:31,0:31:29.50:0,29,780	0/1:28,1:29:56.83:57,0,520	0/1:16,2:17:99:167,0,166	0/0:26,0:21:27.86:0,28,597	0/0:28,0:27:42.11:0,42,769	0/0:74,0:71:51.30:0,51,1964	0/0:30,0:30:57.09:0,57,971	0/0:22,0:21:18.36:0,18,670	0/0:68,0:68:99:0,144,2642	0/0:14,8:22:29.51:0,30,386	0/1:31,4:34:99:265,0,459	0/0:22,0:21:31.15:0,31,988	0/1:6,4:10:47.26:106,0,47
chr10	49032887	.	CGCAT	C	4214.31	PASS	AB=0.949;AC=18;AF=0.321;AN=56;BaseQRankSum=2.742;DP=882;FS=3.205;HRun=0;HaplotypeScore=209.3571;InbreedingCoeff=-0.4827;MQ=46.06;MQ0=28;MQRankSum=-1.717;QD=9.06;ReadPosRankSum=-0.907;VQSLOD=4.1809;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:43:33.93:0,34,1036	0/0:12,0:12:28.56:0,29,405	0/0:42,0:7:18.01:0,18,219	0/0:48,0:5:3.46:0,3,104	0/1:27,0:27:99:161,0,220	0/1:23,2:25:99:172,0,369	0/1:36,2:36:64.44:64,0,637	0/1:27,0:17:62.40:229,0,62	0/1:21,13:33:2.74:3,0,539	0/1:33,0:33:99:527,0,324	0/1:15,1:16:99:148,0,221	0/0:41,0:39:1.57:0,2,981	0/0:31,0:31:53.47:0,53,765	0/1:27,3:29:99:460,0,256	0/0:34,0:32:61.26:0,61,842	0/1:35,1:36:99:192,0,434	0/1:23,2:24:99:535,0,195	0/1:16,2:18:99:373,0,382	0/1:26,0:21:24.28:24,0,598	0/1:23,0:22:6.75:7,0,526	0/0:70,0:68:16.65:0,17,1444	0/0:26,0:26:35.95:0,36,536	0/1:23,0:22:52.33:52,0,449	0/0:69,0:68:99:0,138,2142	0/1:19,1:20:60.90:325,0,61	0/1:28,3:30:99:617,0,391	0/1:22,0:21:99:108,0,617	0/1:10,0:10:31.49:219,0,31
chr10	49032891	.	TAC	T	2011.04	PASS	AB=0.914;AC=22;AF=0.393;AN=56;BaseQRankSum=-0.205;DP=890;FS=5.085;HRun=0;HaplotypeScore=198.3902;InbreedingCoeff=0.0687;MQ=45.98;MQ0=29;MQRankSum=2.768;QD=3.79;ReadPosRankSum=3.366;VQSLOD=2.6547;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:29,11:40:16.47:244,16,0	1/1:7,4:12:11.86:114,12,0	0/0:42,0:7:0:0,0,0	0/0:46,0:4:3.01:0,3,43	0/1:25,1:26:18.18:18,0,166	0/1:25,0:25:12.87:13,0,13	0/1:39,0:37:25.96:26,0,37	0/0:29,0:19:22.74:0,23,243	0/0:34,0:33:8.98:0,9,54	0/1:32,1:33:27.97:28,0,279	0/1:13,1:15:32.34:32,0,121	0/1:33,8:39:32.81:227,0,33	1/1:19,9:29:29.91:312,30,0	0/0:29,2:30:21.08:0,21,275	1/1:27,5:32:32.40:293,32,0	0/1:38,0:38:43.61:54,0,44	0/1:30,0:29:6.88:7,0,329	0/1:18,1:19:3.20:3,0,353	0/0:24,0:20:13.67:0,14,98	0/0:22,0:23:4.25:0,4,30	0/0:70,0:75:20.97:0,21,174	0/1:13,14:27:0.29:179,0,0	1/1:16,4:21:11.04:107,11,0	0/1:46,17:66:14.41:495,0,14	0/0:19,1:20:2.69:0,3,45	0/1:30,2:31:30.08:30,0,365	0/0:18,0:21:18.81:0,19,199	0/0:10,0:10:3.95:0,4,47
chr10	49035034	.	AT	A	13269.96	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=7.416;DP=691;FS=10.157;HRun=9;HaplotypeScore=72.0501;InbreedingCoeff=0.9949;MQ=74.91;MQ0=0;MQRankSum=-2.382;QD=23.08;ReadPosRankSum=2.232;VQSLOD=5.4474;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,1:42:92.87:0,93,1311	0/0:10,0:9:27.08:0,27,312	0/0:21,0:20:49.36:0,49,524	0/0:11,0:11:16.12:0,16,153	1/1:5,31:36:90.04:824,90,0	1/1:2,20:22:51.03:467,51,0	1/1:4,16:20:39.02:357,39,0	1/1:5,27:32:81.01:732,81,0	1/1:1,23:24:63.03:577,63,0	1/1:1,35:36:99:930,102,0	1/1:2,24:26:66.03:604,66,0	1/1:1,24:25:60.03:549,60,0	1/1:1,19:20:50.60:466,51,0	1/1:1,27:28:72.03:658,72,0	0/0:32,0:32:84.25:0,84,970	1/1:2,13:15:39.01:357,39,0	1/1:2,28:30:75.04:686,75,0	1/1:2,20:22:60.03:549,60,0	1/1:3,11:14:33.01:302,33,0	1/1:2,22:24:63.03:577,63,0	1/1:1,22:23:66.03:604,66,0	1/1:0,24:24:66.03:604,66,0	1/1:1,17:18:45.02:412,45,0	1/1:2,32:34:84.05:769,84,0	1/1:1,26:27:72.04:659,72,0	1/1:3,31:34:87.01:791,87,0	1/1:4,27:31:69.03:631,69,0	1/1:4,6:10:18:165,18,0
chr10	49036555	.	GCCT	G	910.28	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=5.462;DP=540;FS=4.156;HRun=0;HaplotypeScore=102.3732;InbreedingCoeff=0.9920;MQ=70.03;MQ0=1;MQRankSum=-1.235;QD=12.30;ReadPosRankSum=-1.821;VQSLOD=2.9338;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:74.60:0,75,1361	0/0:13,0:13:39.07:0,39,628	0/0:16,0:15:30.92:0,31,497	0/0:10,0:10:13.97:0,14,258	0/0:32,0:32:89.47:0,89,793	0/0:19,0:19:54.15:0,54,1014	0/0:13,0:13:39.10:0,39,719	0/0:25,0:24:71.99:0,72,746	0/0:17,0:17:51.16:0,51,991	0/0:18,0:18:47.99:0,48,432	0/0:22,0:22:59.96:0,60,575	1/1:11,1:12:23.02:165,23,0	1/1:13,3:16:31.67:264,32,0	0/0:19,0:19:50.97:0,51,434	0/0:28,0:28:84.25:0,84,1616	0/0:19,0:19:57.16:0,57,1086	0/0:22,0:22:62.98:0,63,550	0/0:21,0:21:56.99:0,57,489	0/0:15,0:15:42.13:0,42,809	0/0:31,0:31:84.25:0,84,1561	0/0:12,0:12:30.05:0,30,522	1/1:17,1:18:41.88:287,42,0	1/1:11,1:12:18.06:121,18,0	1/1:16,0:16:38.74:247,39,0	0/0:29,0:29:86.63:0,87,722	0/0:24,0:24:68.99:0,69,610	0/0:25,0:25:75.23:0,75,1450	0/0:8,0:8:23.99:0,24,204
chr10	49036556	.	CCT	C	1878.98	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=0.821;DP=537;FS=4.878;HRun=0;HaplotypeScore=88.3465;InbreedingCoeff=0.9898;MQ=69.26;MQ0=1;MQRankSum=-1.557;QD=25.39;ReadPosRankSum=-1.960;VQSLOD=3.6326;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:74.52:0,75,1085	0/0:13,0:13:39.05:0,39,507	0/0:17,0:16:16.78:0,17,374	0/0:10,0:9:13.29:0,13,184	0/0:32,0:32:78.34:0,78,461	0/0:20,0:20:57.03:0,57,843	0/0:13,0:13:38.97:0,39,573	0/0:24,0:23:70.87:0,71,589	0/0:17,0:17:51.15:0,51,779	0/0:16,0:16:46.18:0,46,275	0/0:23,0:23:56.74:0,57,346	1/1:3,9:12:24.07:344,24,0	1/1:4,12:16:33.03:413,33,0	0/0:19,0:19:49.04:0,49,277	0/0:28,0:28:84.12:0,84,1272	0/0:20,0:20:60.17:0,60,913	0/0:22,0:22:60.60:0,61,331	0/0:20,0:20:54.68:0,55,290	0/0:16,0:16:45.06:0,45,682	0/0:29,0:29:84.21:0,84,1218	0/0:12,0:12:30.05:0,30,427	1/1:11,7:18:45.02:515,45,0	1/1:1,11:12:20.90:287,21,0	1/1:8,8:16:42.03:495,42,0	0/0:29,0:29:81.43:0,81,416	0/0:23,0:23:66.31:0,66,377	0/0:26,0:26:78.23:0,78,1179	0/0:8,0:8:23.05:0,23,127
chr10	49036558	.	TC	T	4560.04	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=9.431;DP=535;FS=0.755;HRun=10;HaplotypeScore=68.9152;InbreedingCoeff=0.8919;MQ=69.30;MQ0=1;MQRankSum=0.565;QD=15.78;ReadPosRankSum=3.501;VQSLOD=5.3592;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,1:26:54.62:0,55,598	0/0:11,0:11:20.98:0,21,209	0/0:16,1:16:31.62:0,32,271	0/0:10,0:9:7.07:0,7,73	1/1:6,28:34:80.96:702,81,0	0/0:19,2:21:22.04:0,22,458	0/0:12,1:13:7.03:0,7,296	1/1:15,9:23:26.92:234,27,0	0/0:17,0:17:36.09:0,36,390	1/1:3,14:17:41.97:361,42,0	1/1:5,18:23:17.79:382,18,0	1/1:11,0:11:12.39:33,12,0	1/1:16,0:16:16.59:46,17,0	1/1:2,16:18:41.99:365,42,0	0/0:28,0:28:43.54:0,44,697	0/0:20,0:20:48.13:0,48,531	1/1:3,19:22:53.98:469,54,0	1/1:1,19:20:53.99:469,54,0	0/0:18,0:18:23.74:0,24,450	0/0:29,0:29:60.13:0,60,639	0/0:10,0:10:21.06:0,21,232	1/1:16,0:16:9.99:26,10,0	0/1:13,0:13:9.62:17,0,10	1/1:15,0:15:10.83:29,11,0	1/1:1,28:29:83.97:725,84,0	1/1:3,20:23:59.98:521,60,0	0/0:26,0:26:66.16:0,66,714	1/1:2,6:8:20.99:182,21,0
chr10	49038157	.	C	CA	23205.33	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=1.736;DP=718;FS=1.237;HRun=2;HaplotypeScore=84.8973;InbreedingCoeff=0.9989;MQ=80.51;MQ0=0;MQRankSum=-4.212;QD=39.26;ReadPosRankSum=2.551;VQSLOD=5.3300;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,138,1703	0/0:11,0:11:33.10:0,33,405	0/0:20,0:20:50.51:0,51,535	0/0:15,0:15:21.06:0,21,256	1/1:2,36:38:99:1505,108,0	1/1:0,25:25:72.24:1037,72,0	1/1:1,25:26:66.22:951,66,0	1/1:3,25:28:72.21:1014,72,0	1/1:3,19:22:51.17:735,51,0	1/1:1,21:22:63.21:907,63,0	1/1:1,19:20:57.11:774,57,0	1/1:1,23:24:63.21:907,63,0	1/1:0,23:23:63.21:907,63,0	1/1:1,23:24:69.19:970,69,0	0/0:32,0:32:93.28:0,93,1140	1/1:1,21:22:57.19:821,57,0	1/1:0,33:33:93.31:1339,93,0	1/1:0,22:22:60.20:864,60,0	1/1:1,20:21:60.18:842,60,0	1/1:0,36:36:99:1469,102,0	1/1:1,20:21:60.20:864,60,0	1/1:2,30:32:90.26:1273,90,0	1/1:1,17:18:51.17:733,51,0	1/1:1,31:32:84.28:1210,84,0	1/1:0,25:25:72.24:1037,72,0	1/1:2,28:30:84.27:1188,84,0	1/1:0,35:33:96.32:1382,96,0	1/1:0,12:12:33.11:475,33,0
chr10	49039879	.	ATT	A	8092.17	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=7.734;DP=673;FS=4.446;HRun=10;HaplotypeScore=90.5578;InbreedingCoeff=0.9984;MQ=67.54;MQ0=1;MQRankSum=-2.532;QD=28.80;ReadPosRankSum=2.188;VQSLOD=5.2802;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,114,1746	0/0:11,0:11:30.10:0,30,474	0/0:20,0:17:33.48:0,33,458	0/0:12,0:10:18.06:0,18,270	1/1:3,37:40:99:1123,102,0	0/0:9,0:9:24.06:0,24,274	0/0:17,0:17:43.65:0,44,436	1/1:8,23:31:69.10:739,69,0	0/0:20,0:20:57.11:0,57,582	1/1:2,23:25:57.11:682,57,0	1/1:0,24:24:72.19:801,72,0	0/0:18,0:18:51.16:0,51,788	0/0:27,0:27:75.24:0,75,1165	1/1:1,22:23:63.17:701,63,0	0/0:24,0:24:66.23:0,66,1048	0/0:26,0:26:69.14:0,69,700	1/1:6,24:30:66.16:736,66,0	1/1:1,19:20:57.14:635,57,0	0/0:19,0:20:50.84:0,51,752	0/0:39,0:39:99:0,114,1762	0/0:15,0:15:42.14:0,42,667	0/0:22,0:22:60.20:0,60,952	0/0:27,0:27:75.21:0,75,1163	0/0:16,0:16:45.14:0,45,688	1/1:2,29:31:78.20:870,78,0	1/1:2,32:34:93.23:1036,93,0	0/0:27,0:28:83.74:0,84,1246	1/1:0,23:23:69.19:769,69,0
chr10	49040135	.	T	TTTATCTCTCTGGAAAGGA	18741.91	PASS	AB=0.900;AC=53;AF=0.946;AN=56;BaseQRankSum=-6.149;DP=303;FS=9.778;HRun=0;HaplotypeScore=399.5098;InbreedingCoeff=-0.0984;MQ=60.09;MQ0=0;MQRankSum=0.284;QD=61.85;ReadPosRankSum=1.595;VQSLOD=3.2099;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,0:12:22.56:795,23,0	1/1:3,0:3:6.02:262,6,0	1/1:4,1:10:29.77:883,30,0	0/1:4,0:7:45.59:360,0,46	0/1:15,0:15:32.77:362,0,33	1/1:11,0:11:32.81:892,33,0	1/1:11,0:11:23.80:781,24,0	1/1:15,0:15:39.07:714,39,0	1/1:12,0:12:22.31:678,22,0	1/1:13,0:13:30.36:1065,30,0	0/1:10,0:10:15.81:494,0,16	1/1:14,0:14:14.67:925,15,0	1/1:12,0:12:13.25:488,13,0	1/1:13,0:13:36.12:1246,36,0	1/1:8,0:8:13.84:584,14,0	1/1:20,0:20:15.80:1229,16,0	1/1:8,0:8:1.75:363,2,0	1/1:11,0:11:12.83:714,13,0	1/1:12,0:12:9.08:550,9,0	1/1:9,0:9:8.86:400,9,0	1/1:4,0:4:9:226,9,0	1/1:6,0:6:12.04:342,12,0	1/1:7,0:7:18.06:555,18,0	1/1:8,0:8:12:329,12,0	1/1:12,0:12:30.10:1268,30,0	1/1:20,0:20:49.19:1471,49,0	1/1:15,0:15:0.90:468,1,0	1/1:5,0:5:3.47:296,3,0
chr10	49040756	.	C	CT	3212.13	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-11.119;DP=674;FS=4.468;HRun=6;HaplotypeScore=63.4282;InbreedingCoeff=0.9999;MQ=86.40;MQ0=0;MQRankSum=-1.807;QD=29.74;ReadPosRankSum=0.527;VQSLOD=4.3759;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:90.17:0,90,903	0/0:13,0:13:36.55:0,37,368	0/0:16,0:16:36.07:0,36,360	0/0:28,0:28:63.02:0,63,601	0/0:25,0:25:66.13:0,66,665	0/0:29,0:29:72.12:0,72,720	0/0:27,0:27:78.18:0,78,796	0/0:32,0:32:78.15:0,78,786	0/0:23,0:23:69.16:0,69,704	0/0:23,0:23:65.98:0,66,656	0/0:24,0:24:60.11:0,60,604	0/0:33,0:33:93.21:0,93,949	0/0:18,0:18:51.10:0,51,513	0/0:26,0:26:72.16:0,72,734	0/0:27,0:27:75.15:0,75,759	0/0:26,0:26:78.14:0,78,785	0/0:18,0:18:39.07:0,39,391	0/0:20,0:19:60.11:0,60,604	1/1:1,26:27:75.22:930,75,0	1/1:2,19:21:51.12:624,51,0	1/1:3,16:19:39.12:491,39,0	0/0:24,0:24:66.14:0,66,673	0/0:16,0:16:39.06:0,39,389	0/0:21,0:21:63.13:0,63,635	0/0:20,0:20:57.13:0,57,581	0/0:31,0:31:87.19:0,87,887	1/1:2,39:41:99:1329,108,0	0/0:14,0:14:42.10:0,42,428
chr10	49041840	.	C	CCCCT	6644.60	PASS	AB=0.780;AC=23;AF=0.411;AN=56;BaseQRankSum=-5.171;DP=498;FS=0.433;HRun=0;HaplotypeScore=144.5199;InbreedingCoeff=-0.1782;MQ=44.30;MQ0=12;MQRankSum=5.279;QD=17.81;ReadPosRankSum=-1.033;VQSLOD=4.5547;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:49.42:0,49,970	0/0:13,0:13:18.64:0,19,451	0/0:9,0:6:17.89:0,18,257	0/0:8,0:5:5.05:0,5,38	0/1:27,3:29:99:370,0,182	0/0:21,0:20:46.48:0,46,729	0/0:8,0:8:21.90:0,22,341	0/1:7,17:29:92.77:1029,0,93	0/0:6,0:6:18.06:0,18,320	0/1:25,4:29:99:794,0,302	0/1:18,12:31:47.78:48,0,233	0/1:7,12:20:99:149,0,229	0/1:7,8:14:68.56:69,0,137	0/1:20,3:23:99:665,0,301	0/0:21,0:19:27.62:0,28,706	0/0:17,0:16:44.50:0,45,836	0/1:5,4:8:73.80:74,0,105	0/1:2,4:6:71.52:75,0,72	0/1:14,0:11:99:506,0,103	1/1:9,0:9:7.53:185,8,0	1/1:4,11:14:9.03:221,9,0	0/1:37,5:43:99:689,0,443	0/1:16,0:15:91.39:327,0,91	1/1:4,12:15:3.01:34,3,0	0/1:9,12:22:99:202,0,231	0/1:17,10:26:99:569,0,614	0/1:7,0:7:26.89:271,0,27	1/1:9,0:8:18.05:368,18,0
chr10	49043393	.	TA	T	7670.68	PASS	AB=0.977;AC=40;AF=0.714;AN=56;BaseQRankSum=11.571;DP=656;FS=1.611;HRun=11;HaplotypeScore=80.6785;InbreedingCoeff=0.7616;MQ=70.57;MQ0=0;MQRankSum=-1.185;QD=15.31;ReadPosRankSum=2.026;VQSLOD=5.6390;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:57.13:0,57,601	0/0:9,1:10:2.42:0,2,231	0/1:20,1:19:24.18:24,0,200	0/1:9,0:9:7.62:8,0,103	1/1:4,22:26:62.89:517,63,0	1/1:4,0:36:59.07:171,59,0	1/1:1,0:16:28.52:82,29,0	1/1:9,28:37:83.86:687,84,0	1/1:1,0:17:30.55:88,31,0	1/1:3,26:29:74.87:611,75,0	1/1:1,26:27:74.87:610,75,0	1/1:4,25:29:62.91:517,63,0	1/1:2,20:23:49.98:400,50,0	1/1:6,20:26:49.25:416,49,0	0/0:18,0:19:39.05:0,39,454	1/1:2,0:19:32.59:94,33,0	1/1:5,28:33:77.89:640,78,0	1/1:3,14:18:41.83:335,42,0	0/0:27,1:28:41.52:0,42,647	0/0:28,0:30:81:0,81,832	0/0:14,1:15:8.45:0,8,295	1/1:7,20:27:53.86:437,54,0	1/1:5,24:29:57.70:470,58,0	1/1:4,10:14:1.97:215,2,0	1/1:3,15:18:41.94:345,42,0	1/1:3,23:26:68.86:559,69,0	0/0:29,0:28:50.93:0,51,707	1/1:0,21:21:53.94:443,54,0
chr10	49048357	.	C	CGT	5724.03	PASS	AB=0.736;AC=39;AF=0.696;AN=56;BaseQRankSum=4.997;DP=726;FS=26.438;HRun=0;HaplotypeScore=147.9972;InbreedingCoeff=0.0599;MQ=51.15;MQ0=20;MQRankSum=-2.620;QD=8.63;ReadPosRankSum=-1.886;VQSLOD=2.7806;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:30:62.82:0,63,664	0/0:10,0:10:18.05:0,18,204	0/1:72,0:18:64.44:64,0,71	0/1:70,0:19:17.43:17,0,58	1/1:8,2:23:9.02:118,9,0	0/1:13,15:28:32.68:365,0,33	0/1:15,9:24:85.64:247,0,86	1/1:35,0:35:23.29:221,23,0	1/1:10,11:21:24.08:368,24,0	1/1:17,0:20:30:297,30,0	1/1:17,1:22:16.78:169,17,0	0/1:11,11:26:43.93:353,0,44	0/1:13,11:25:54.27:318,0,54	1/1:17,3:29:39.48:416,39,0	0/0:21,0:23:44.79:0,45,470	0/1:11,15:26:91.56:497,0,92	1/1:6,3:11:15.04:201,15,0	1/1:16,2:19:16.08:186,16,0	1/1:12,0:17:14.95:98,15,0	1/1:6,0:10:12.55:50,13,0	1/1:38,0:37:7.82:63,8,0	0/1:7,6:13:22:126,0,22	0/1:7,14:21:10.44:298,0,10	0/1:9,6:15:40.97:293,0,41	1/1:11,1:26:12.03:138,12,0	1/1:17,1:29:38.96:379,39,0	1/1:13,1:22:23.98:205,24,0	0/1:12,3:19:6.43:236,0,6
chr10	49070149	.	GTTTGTTTATTTATTTA	G	6063.80	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=-1.266;DP=340;FS=8.982;HRun=0;HaplotypeScore=145.6980;InbreedingCoeff=0.3756;MQ=65.08;MQ0=0;MQRankSum=2.802;QD=24.95;ReadPosRankSum=-1.615;VQSLOD=3.2339;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:32.90:0,33,778	0/0:3,0:3:9:0,9,186	0/0:9,0:9:14.87:0,15,144	0/0:5,0:4:12.03:0,12,136	1/1:0,12:12:27.46:289,27,0	0/1:13,0:13:74.90:262,0,75	0/1:8,0:8:72.66:73,0,127	1/1:2,25:26:71.84:701,72,0	0/1:12,0:12:62.85:625,0,63	1/1:0,13:13:35.61:584,36,0	1/1:3,12:15:26.66:500,27,0	0/0:5,0:5:9.03:0,9,543	1/1:8,0:8:23.96:197,24,0	1/1:0,5:5:3.01:67,3,0	0/0:8,0:8:11.99:0,12,211	0/1:19,0:19:53.90:354,0,54	1/1:0,21:21:3.01:140,3,0	1/1:1,16:17:6.02:150,6,0	0/0:19,0:19:45.32:0,45,454	0/0:15,0:15:44.41:0,44,568	0/0:2,0:2:5.97:0,6,75	0/1:4,0:4:63.93:64,0,134	0/1:6,0:6:9.47:9,0,787	0/1:5,0:5:60.47:60,0,190	1/1:2,13:15:3.01:129,3,0	1/1:2,22:24:66.06:1298,66,0	0/0:18,0:18:39.21:0,39,336	1/1:1,18:18:12.04:560,12,0
chr10	49070153	.	GTTTA	G	1132.39	PASS	AB=1.000;AC=35;AF=0.761;AN=46;BaseQRankSum=3.729;DP=328;FS=0.000;HRun=0;HaplotypeScore=98.8093;InbreedingCoeff=0.4742;MQ=62.33;MQ0=0;MQRankSum=-4.101;QD=4.31;ReadPosRankSum=-2.261;VQSLOD=1.6633;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:11,2:13:14.23:149,14,0	1/1:2,1:3:3.01:47,3,0	./.	./.	1/1:12,0:12:3:28,3,0	1/1:14,0:14:9.01:84,9,0	1/1:8,0:8:3:28,3,0	0/1:25,0:24:0:0,0,0	1/1:12,0:12:21.02:195,21,0	1/1:13,0:13:5.91:49,6,0	1/1:13,0:13:6.01:56,6,0	0/0:4,0:4:9.02:0,9,166	./.	./.	1/1:3,4:7:3.01:47,3,0	1/1:19,0:19:12.01:112,12,0	1/1:21,0:21:3:28,3,0	1/1:16,0:16:5.91:38,6,0	0/0:19,0:19:1.25:0,1,3	1/1:15,0:15:3:28,3,0	./.	0/0:3,0:3:3.01:0,3,48	0/0:6,0:6:12.04:0,12,279	0/0:5,0:5:3.01:0,3,70	1/1:13,0:13:2.92:17,3,0	1/1:22,0:22:12.01:112,12,0	1/1:18,0:18:11.58:134,12,0	1/1:19,0:17:12.01:112,12,0
chr10	49070177	.	ATTTATTTATTTATTTATTTC	A	2886.11	PASS	AB=1.000;AC=17;AF=0.315;AN=54;BaseQRankSum=5.755;DP=307;FS=0.000;HRun=0;HaplotypeScore=149.2353;InbreedingCoeff=0.2240;MQ=55.28;MQ0=2;MQRankSum=-6.629;QD=16.40;ReadPosRankSum=5.937;VQSLOD=2.2027;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:33.10:0,33,1291	0/0:2,0:2:3.01:0,3,191	0/0:6,0:2:6.02:0,6,173	./.	0/1:11,0:11:22.50:22,0,198	1/1:1,14:15:9.03:507,9,0	1/1:0,5:5:3.01:169,3,0	0/0:31,0:30:71.96:0,72,1128	1/1:2,11:13:21.07:1184,21,0	0/1:12,0:12:45.84:46,0,175	0/1:13,0:13:66.19:66,0,92	0/0:8,0:8:24.04:0,24,915	0/0:2,0:2:6.01:0,6,94	0/0:6,0:6:9.01:0,9,131	0/0:5,0:5:6.01:0,6,206	1/1:0,21:21:11.82:676,12,0	0/1:22,0:22:25.49:25,0,149	0/0:15,0:15:14.37:0,14,164	0/1:17,0:16:62.71:63,0,302	0/0:9,0:9:8.07:0,8,570	0/0:2,0:2:3.48:0,3,78	0/0:4,0:4:12.01:0,12,347	0/0:6,0:6:18.05:0,18,1176	0/0:2,0:2:6.02:0,6,330	0/1:8,0:8:23.74:24,0,44	0/1:22,0:22:99:114,0,407	0/0:17,0:17:23.91:0,24,685	1/1:17,0:15:12.04:159,12,0
chr10	49070189	.	ATTTATTTC	A	2225.39	PASS	AB=1.000;AC=24;AF=0.429;AN=56;BaseQRankSum=8.670;DP=336;FS=5.721;HRun=0;HaplotypeScore=99.4555;InbreedingCoeff=0.3551;MQ=57.58;MQ0=2;MQRankSum=-7.412;QD=9.85;ReadPosRankSum=5.751;VQSLOD=1.0814;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:35.93:0,36,340	0/0:1,0:1:3.01:0,3,35	0/0:11,0:7:21.05:0,21,239	0/0:3,0:1:3.01:0,3,38	0/1:14,0:14:11.21:11,0,143	1/1:14,0:14:9.03:194,9,0	1/1:5,0:5:3.01:65,3,0	0/0:34,0:33:72.88:0,73,670	1/1:11,0:11:21.07:453,21,0	0/1:14,0:14:35.12:35,0,165	0/1:11,0:11:58.68:59,0,82	0/0:8,0:8:23.96:0,24,429	0/0:5,0:5:14.91:0,15,117	0/0:8,0:8:14.98:0,15,125	0/0:8,0:8:15:0,15,135	1/1:21,0:21:11.97:258,12,0	0/1:26,0:26:9.47:9,0,162	0/1:14,0:14:12.95:13,0,115	1/1:14,0:13:35.85:367,36,0	1/1:1,5:6:11.86:141,12,0	1/1:4,0:4:11.86:85,12,0	0/0:7,0:7:20.99:0,21,193	0/0:7,0:7:21.03:0,21,565	0/0:3,0:3:9:0,9,184	0/1:11,0:11:0.10:0,0,172	0/1:25,0:25:99:99,0,243	1/1:0,20:20:20.86:493,21,0	0/1:16,0:15:15.90:133,0,16
chr10	49070865	.	GAC	G	3479.37	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=11.996;DP=741;FS=6.839;HRun=0;HaplotypeScore=128.0362;InbreedingCoeff=0.9226;MQ=63.82;MQ0=5;MQRankSum=1.245;QD=28.99;ReadPosRankSum=1.924;VQSLOD=4.9341;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:81.25:0,81,1405	0/0:12,0:12:36.12:0,36,633	0/0:10,0:6:10.17:0,10,108	0/1:6,0:4:1.02:9,0,1	0/0:32,0:32:93.29:0,93,1582	0/0:22,0:22:66.21:0,66,1125	0/0:14,0:14:39.12:0,39,652	0/0:34,0:34:99:0,99,1665	0/0:24,0:24:72.25:0,72,1277	0/0:45,0:45:99:0,129,2257	0/0:23,0:23:69.24:0,69,1207	0/0:26,0:26:72.23:0,72,1227	0/0:27,0:27:81.28:0,81,1419	0/0:34,0:34:99:0,99,1665	0/0:33,0:33:99:0,99,1750	0/0:27,0:26:81.26:0,81,1402	0/0:27,0:27:72.25:0,72,1268	0/0:24,0:24:69.21:0,69,1192	1/1:1,12:13:36.06:428,36,0	1/1:3,39:40:78.26:1071,78,0	1/1:0,21:21:54.18:741,54,0	0/0:34,0:34:96.31:0,96,1667	0/0:31,0:31:81.25:0,81,1374	0/0:22,0:22:57.18:0,57,976	0/0:43,0:43:99:0,129,2209	0/0:33,0:33:96.22:0,96,1663	1/1:1,37:36:90.30:1231,90,0	0/0:14,0:14:42.14:0,42,730
chr10	49071071	.	TAGAG	T	7278	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=14.560;DP=808;FS=4.970;HRun=0;HaplotypeScore=141.6983;InbreedingCoeff=0.9998;MQ=82.13;MQ0=0;MQRankSum=-5.753;QD=49.85;ReadPosRankSum=3.067;VQSLOD=5.9491;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,138,3996	0/0:10,0:10:30.10:0,30,869	0/0:28,0:28:81.22:0,81,2036	0/0:33,0:33:96.29:0,96,2528	0/0:18,0:18:54.19:0,54,1562	0/0:27,0:27:81.28:0,81,2314	0/0:17,0:17:48.13:0,48,1265	0/0:40,0:40:99:0,120,3339	0/0:34,0:34:99:0,102,2890	0/0:28,0:28:84.29:0,84,2435	0/0:14,0:14:39.12:0,39,1068	1/1:0,39:39:96.11:2009,96,0	1/1:0,37:37:90.13:1714,90,0	0/0:31,0:31:93.32:0,93,2691	0/0:38,0:38:99:0,114,3212	0/0:44,0:44:99:0,129,3612	0/0:40,0:40:99:0,120,3401	0/0:26,0:26:75.26:0,75,2178	0/0:14,0:14:42.13:0,42,1156	0/0:28,0:28:84.29:0,84,2402	0/0:36,0:36:99:0,108,3129	1/1:0,20:20:45.15:916,45,0	1/1:0,18:18:48.16:1005,48,0	1/1:0,32:32:78.27:1634,78,0	0/0:26,0:26:75.24:0,75,2082	0/0:39,0:39:99:0,114,3252	0/0:34,0:34:99:0,102,2952	0/0:11,0:11:33.09:0,33,891
chr10	49072182	.	A	AT	2781.51	PASS	AC=36;AF=0.692;AN=52;BaseQRankSum=4.473;DP=425;FS=30.174;HRun=2;HaplotypeScore=43.4201;InbreedingCoeff=0.7470;MQ=38.30;MQ0=122;MQRankSum=-7.884;QD=10.08;ReadPosRankSum=-0.291;VQSLOD=-0.3802;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:63.20:0,63,781	0/0:8,0:8:21.07:0,21,260	0/0:11,0:2:6.02:0,6,74	0/0:11,0:6:11.48:0,11,180	1/1:3,22:18:15.01:192,15,0	1/1:1,11:5:8.99:106,9,0	1/1:1,10:4:6.02:86,6,0	./.	1/1:1,7:4:6.02:86,6,0	1/1:7,14:11:27.05:365,27,0	1/1:2,25:19:9.03:129,9,0	1/1:2,10:5:15.05:215,15,0	1/1:0,16:7:6.02:86,6,0	1/1:1,16:7:12.04:172,12,0	0/0:18,0:18:42.13:0,42,521	1/1:1,9:5:9.03:129,9,0	1/1:1,11:1:3.01:43,3,0	1/1:0,9:2:3.01:43,3,0	0/0:8,0:2:6.02:0,6,74	0/0:24,0:19:33.10:0,33,408	./.	1/1:1,8:7:6.02:86,6,0	1/1:6,18:18:14.73:192,15,0	1/1:1,9:2:3.01:43,3,0	1/1:2,21:23:42.14:603,42,0	1/1:0,13:7:21.07:302,21,0	0/0:24,0:18:21.04:0,21,260	1/1:1,16:8:6.02:86,6,0
chr10	49073921	.	AC	A	2342.34	PASS	AB=0.730;AC=37;AF=0.685;AN=54;BaseQRankSum=0.697;DP=185;FS=49.776;HRun=6;HaplotypeScore=34.0890;InbreedingCoeff=0.6259;MQ=68.50;MQ0=0;MQRankSum=-2.203;QD=17.61;ReadPosRankSum=1.908;VQSLOD=0.3442;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:7:21.04:0,21,257	./.	0/0:11,0:9:21.08:0,21,203	0/1:5,0:4:0.59:1,0,70	1/1:2,0:2:6.02:64,6,0	1/1:1,5:6:15.04:160,15,0	1/1:0,9:9:27.07:290,27,0	1/1:2,9:11:24.06:257,24,0	1/1:3,5:8:6.01:64,6,0	1/1:2,4:6:15.04:161,15,0	1/1:0,1:1:3.01:32,3,0	1/1:1,4:5:2.39:31,2,0	1/1:0,5:5:12.03:129,12,0	1/1:4,11:15:28.81:321,29,0	0/0:6,0:6:14.95:0,15,157	1/1:1,4:6:10.52:101,11,0	1/1:1,7:8:15.04:161,15,0	0/1:2,4:6:10.02:114,0,10	0/0:6,0:6:18.04:0,18,221	0/0:3,0:3:9.01:0,9,103	0/0:13,0:13:30.56:0,31,379	1/1:4,2:6:4.63:78,5,0	1/1:2,4:6:9.02:95,9,0	0/1:4,9:13:14.21:85,0,14	1/1:2,6:7:18.51:189,19,0	1/1:0,5:5:15.04:161,15,0	0/0:6,0:6:14.63:0,15,161	1/1:1,1:2:4.56:36,5,0
chr10	49074196	.	AC	A	17109.45	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=6.693;DP=699;FS=4.314;HRun=3;HaplotypeScore=131.4641;InbreedingCoeff=0.9954;MQ=82.97;MQ0=0;MQRankSum=-4.775;QD=38.36;ReadPosRankSum=2.355;VQSLOD=3.5886;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,126,1989	0/0:7,0:7:21.07:0,21,336	0/0:25,0:25:56.50:0,56,924	0/0:19,0:19:37.52:0,38,707	1/1:0,13:13:39.13:545,39,0	1/1:0,21:21:60.20:839,60,0	1/1:0,36:36:96.32:1340,96,0	1/1:0,28:28:84.28:1173,84,0	1/1:0,23:23:60.20:839,60,0	1/1:0,21:21:63.18:843,63,0	1/1:1,10:11:33.11:448,33,0	1/1:1,38:39:99:1361,99,0	1/1:0,38:38:99:1383,99,0	1/1:0,30:30:78.26:1091,78,0	0/0:41,0:41:99:0,123,1888	1/1:0,27:27:72.24:1007,72,0	1/1:0,34:34:99:1384,99,0	1/1:0,17:17:48.16:671,48,0	0/0:25,0:25:75.26:0,75,1199	0/0:9,0:9:27.09:0,27,425	0/0:64,0:64:99:0,193,2960	1/1:0,18:18:42.14:587,42,0	1/1:0,6:6:18.06:252,18,0	1/1:0,29:29:84.28:1175,84,0	1/1:0,20:20:54.18:748,54,0	1/1:0,30:30:87.29:1215,87,0	0/0:20,0:20:60.19:0,60,935	1/1:0,5:5:15.05:210,15,0
chr10	49074915	.	A	AC	2420.35	PASS	AB=0.571;AC=19;AF=0.339;AN=56;BaseQRankSum=-8.153;DP=434;FS=7.486;HRun=8;HaplotypeScore=56.5175;InbreedingCoeff=0.9071;MQ=77.33;MQ0=1;MQRankSum=0.783;QD=16.69;ReadPosRankSum=-0.262;VQSLOD=3.1466;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:62.03:0,62,574	0/0:9,0:9:14.99:0,15,133	0/0:23,0:15:34.95:0,35,285	0/0:34,0:26:39.27:0,39,339	1/1:2,9:11:24.07:277,24,0	0/0:15,0:15:42.02:0,42,384	0/0:16,0:16:33.01:0,33,302	1/1:8,18:26:44.40:479,44,0	0/0:10,0:10:24.01:0,24,219	1/1:0,5:5:12.04:139,12,0	1/1:5,7:12:24.07:269,24,0	0/0:12,0:12:24.01:0,24,219	0/0:9,0:9:21:0,21,190	1/1:1,13:14:20.93:242,21,0	0/0:10,0:10:30.02:0,30,274	0/0:12,0:12:21:0,21,192	1/1:10,19:29:5.64:319,6,0	1/1:4,9:13:27.08:312,27,0	0/0:18,0:18:26.95:0,27,236	0/0:10,0:10:30:0,30,268	0/0:29,0:29:71.76:0,72,638	0/0:7,0:7:21.01:0,21,192	0/0:8,0:8:24:0,24,215	0/0:26,0:26:63.03:0,63,575	1/1:1,9:10:9.03:104,9,0	1/1:5,8:13:24.07:272,24,0	0/0:10,0:10:27.01:0,27,247	0/1:3,9:12:3.40:217,0,3
chr10	49075356	.	T	TGTTCAG	41509	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-7.802;DP=615;FS=16.733;HRun=0;HaplotypeScore=109.7349;InbreedingCoeff=0.9834;MQ=70.99;MQ0=1;MQRankSum=-15.693;QD=85.23;ReadPosRankSum=-0.671;VQSLOD=5.0941;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:56:99:0,160,3748	0/0:8,0:8:24.08:0,24,573	0/0:18,0:17:41.50:0,42,878	0/0:17,0:17:39.10:0,39,850	1/1:3,13:16:42.01:1204,42,0	1/1:3,26:29:84.29:2950,84,0	1/1:12,17:29:78.27:2567,78,0	1/1:8,15:26:75.22:2266,75,0	1/1:7,15:24:54.19:1854,54,0	1/1:6,13:23:69.24:2241,69,0	1/1:3,3:8:8.99:235,9,0	1/1:7,17:26:69.19:2309,69,0	1/1:9,22:32:87.30:2948,87,0	1/1:9,22:30:84.29:2839,84,0	0/0:29,0:29:87.26:0,87,1922	1/1:4,18:22:57.20:1977,57,0	1/1:6,19:29:69.24:2457,69,0	1/1:4,12:17:45.15:1500,45,0	1/1:10,15:29:81.28:2660,81,0	1/1:1,14:16:48:1331,48,0	1/1:3,11:16:27.09:943,27,0	1/1:0,8:10:27.05:872,27,0	1/1:2,6:9:21.07:713,21,0	1/1:3,11:16:27.05:838,27,0	1/1:6,16:22:48.16:1641,48,0	1/1:6,17:24:72.23:2461,72,0	1/1:7,15:24:59.74:1948,60,0	1/1:0,7:9:21.07:755,21,0
chr10	49075560	.	CAT	C	6074.89	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-9.203;DP=657;FS=2.048;HRun=0;HaplotypeScore=113.1881;InbreedingCoeff=0.9998;MQ=76.81;MQ0=0;MQRankSum=-1.507;QD=38.21;ReadPosRankSum=1.863;VQSLOD=6.9848;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,120,2199	0/0:11,0:11:33.11:0,33,608	0/0:19,0:19:44.05:0,44,831	0/0:11,0:11:29.22:0,29,531	0/0:30,0:30:90.29:0,90,1651	1/1:1,20:21:45.15:661,45,0	1/1:0,21:21:57.19:839,57,0	0/0:35,0:35:99:0,102,1835	1/1:0,16:16:48.16:706,48,0	0/0:36,0:36:99:0,108,1982	0/0:23,0:23:63.22:0,63,1179	0/0:36,0:36:99:0,102,1908	0/0:27,0:27:75.26:0,75,1395	0/0:23,0:23:63.11:0,63,1178	0/0:27,0:27:75.26:0,75,1395	1/1:0,16:16:36.12:530,36,0	0/0:21,0:21:63.17:0,63,1094	0/0:24,0:24:66.23:0,66,1225	1/1:0,17:17:51.17:750,51,0	1/1:0,30:30:81.27:1177,81,0	1/1:0,14:14:39.13:574,39,0	0/0:20,0:20:51.16:0,51,923	0/0:30,0:30:84.27:0,84,1534	0/0:13,0:13:39.13:0,39,730	0/0:28,0:28:84.29:0,84,1564	0/0:30,0:30:90.30:0,90,1632	1/1:1,23:24:57.19:837,57,0	0/0:12,0:12:36.12:0,36,667
chr10	49076172	.	C	CTT	37055.62	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-14.742;DP=887;FS=3.348;HRun=1;HaplotypeScore=93.4936;InbreedingCoeff=0.9998;MQ=80.71;MQ0=1;MQRankSum=-5.823;QD=50.55;ReadPosRankSum=2.781;VQSLOD=4.9909;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,135,2043	0/0:11,0:11:33.10:0,33,480	0/0:23,0:22:63.19:0,63,884	0/0:21,0:22:47.62:0,48,638	1/1:1,27:29:81.09:1411,81,0	1/1:1,34:36:99:1978,105,0	1/1:0,37:37:99:1909,99,0	1/1:0,26:26:78.25:1465,78,0	1/1:1,32:34:84.29:1622,84,0	1/1:2,37:42:99:1928,111,0	1/1:1,20:23:60.16:1099,60,0	1/1:0,34:36:96.33:1855,96,0	1/1:0,36:36:99:1909,99,0	1/1:3,36:39:99:1895,99,0	0/0:52,0:52:99:0,150,2188	1/1:1,43:44:99:2165,114,0	1/1:0,25:25:69.24:1333,69,0	1/1:1,16:17:45.15:869,45,0	1/1:3,24:27:78.23:1456,78,0	1/1:2,25:26:78.03:1281,78,0	1/1:2,53:55:99:2711,141,0	1/1:1,23:25:63.17:1179,63,0	1/1:0,32:33:88.18:1681,88,0	1/1:1,35:36:99:2049,108,0	1/1:1,19:20:51.13:947,51,0	1/1:2,38:41:74.43:2116,74,0	1/1:0,34:33:84.29:1619,84,0	1/1:0,11:11:30.10:579,30,0
chr10	49076441	.	ACAGT	A	4653.92	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=12.311;DP=674;FS=13.744;HRun=0;HaplotypeScore=110.5021;InbreedingCoeff=0.9963;MQ=73.23;MQ0=0;MQRankSum=-4.647;QD=47.01;ReadPosRankSum=1.581;VQSLOD=5.2353;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,123,3266	0/0:8,0:8:21.07:0,21,559	0/0:10,0:10:27.09:0,27,642	0/0:17,0:17:38.86:0,39,1091	0/0:27,0:27:75.26:0,75,1989	1/1:0,33:33:87.30:1576,87,0	1/1:0,22:22:63.22:1175,63,0	0/0:35,0:35:93.31:0,93,2328	1/1:2,18:20:42.14:784,42,0	0/0:19,0:19:57.20:0,57,1517	0/0:20,0:20:54.19:0,54,1440	0/0:19,0:19:51.15:0,51,1279	0/0:27,0:27:78.25:0,78,2010	0/0:20,0:20:51.17:0,51,1350	0/0:37,0:37:99:0,102,2667	1/1:1,23:24:60.21:1119,60,0	0/0:36,0:36:93.32:0,93,2444	0/0:23,0:23:69.22:0,69,1782	0/0:24,0:24:69.24:0,69,1839	0/0:26,0:26:72.25:0,72,1907	0/0:29,0:29:84.29:0,84,2230	0/0:21,0:21:57.18:0,57,1464	0/0:26,0:26:75.26:0,75,1988	0/0:20,0:20:60.19:0,60,1544	0/0:29,0:29:87.29:0,87,2224	0/0:28,0:28:81.27:0,81,2107	0/0:25,0:25:69.24:0,69,1839	0/0:6,0:6:18.06:0,18,479
chr10	49076542	.	AGTG	A	2959.43	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=3.456;DP=426;FS=1.108;HRun=0;HaplotypeScore=68.7143;InbreedingCoeff=0.8948;MQ=54.04;MQ0=4;MQRankSum=0.971;QD=37.46;ReadPosRankSum=5.452;VQSLOD=3.7767;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:65.94:0,66,1261	0/0:3,0:3:9.02:0,9,150	0/0:4,0:2:3.01:0,3,42	0/0:7,0:2:5.98:0,6,89	0/0:16,0:16:33.11:0,33,743	0/0:17,0:17:39.09:0,39,841	0/0:13,0:13:33.11:0,33,758	0/0:19,0:18:45.09:0,45,911	0/0:10,0:10:30.10:0,30,692	0/0:23,0:23:66.23:0,66,1488	0/0:15,0:14:36.10:0,36,735	0/0:16,0:16:42.12:0,42,917	0/0:16,0:16:42.08:0,42,851	0/0:11,0:11:33.11:0,33,759	0/0:15,0:15:45.15:0,45,1034	0/0:7,0:7:18.06:0,18,415	0/0:23,0:23:63.22:0,63,1430	0/0:25,0:25:72.23:0,72,1613	1/1:0,17:17:51.17:868,51,0	1/1:0,14:14:36.12:613,36,0	1/1:2,20:22:42.14:716,42,0	0/0:10,0:10:27.08:0,27,554	0/0:11,0:11:33.05:0,33,616	0/0:21,0:21:51.12:0,51,1124	0/0:12,0:12:36.11:0,36,773	0/0:23,0:23:69.19:0,69,1487	1/1:2,24:26:54.18:921,54,0	0/0:3,0:3:9.03:0,9,199
chr10	49076863	.	ATTT	A	2986.78	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=6.023;DP=462;FS=0.000;HRun=14;HaplotypeScore=70.5897;InbreedingCoeff=0.9472;MQ=75.35;MQ0=1;MQRankSum=-0.906;QD=21.49;ReadPosRankSum=6.603;VQSLOD=2.3597;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:32:84.26:0,84,1444	0/0:3,0:4:9.03:0,9,143	0/0:20,0:16:21.01:0,21,259	0/0:14,0:10:23.95:0,24,299	0/0:12,0:13:30.10:0,30,486	1/1:5,18:23:39.07:456,39,0	1/1:4,14:19:36.02:421,36,0	0/0:26,0:30:73.39:0,73,1126	1/1:4,9:14:5.87:258,6,0	0/0:8,0:8:18.06:0,18,307	0/0:12,0:14:36.10:0,36,548	0/0:17,0:17:42.13:0,42,709	0/0:15,0:17:48.12:0,48,788	0/0:19,0:20:51.15:0,51,882	0/0:26,0:26:69.23:0,69,1228	1/1:6,13:19:36.04:417,36,0	0/0:16,0:20:45.11:0,45,779	0/0:22,0:26:66.16:0,66,1079	1/1:2,11:13:33.05:383,33,0	1/1:0,10:10:27.06:316,27,0	1/1:4,9:14:18.84:241,19,0	0/0:3,0:3:6.02:0,6,113	0/0:8,0:8:18.06:0,18,338	0/0:15,0:17:45.12:0,45,695	0/0:14,0:14:42.14:0,42,749	0/0:13,0:15:42.09:0,42,692	1/1:5,22:27:60.10:699,60,0	0/0:5,0:5:15.05:0,15,249
chr10	49077593	.	CTG	C	7108.08	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=9.240;DP=725;FS=1.877;HRun=0;HaplotypeScore=146.8195;InbreedingCoeff=0.9990;MQ=81.56;MQ0=0;MQRankSum=-3.507;QD=37.02;ReadPosRankSum=2.366;VQSLOD=6.6468;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,141,2598	0/0:17,0:17:51.17:0,51,955	0/0:25,0:25:73.12:0,73,1208	0/0:17,0:17:51.17:0,51,886	0/0:22,0:22:66.23:0,66,1224	1/1:0,15:15:42.14:618,42,0	1/1:2,27:29:69.23:1015,69,0	0/0:29,0:29:81.23:0,81,1452	1/1:0,25:25:72.24:1060,72,0	0/0:30,0:30:90.26:0,90,1535	0/0:9,0:9:24.08:0,24,449	0/0:31,0:31:93.31:0,93,1710	0/0:30,0:30:84.29:0,84,1549	0/0:28,0:28:78.25:0,78,1430	0/0:35,0:35:99:0,99,1846	1/1:1,22:23:63.21:927,63,0	0/0:45,0:45:99:0,129,2370	0/0:29,0:29:87.30:0,87,1621	1/1:0,15:15:45.15:662,45,0	1/1:1,17:18:42.12:618,42,0	1/1:5,28:33:60.67:884,61,0	0/0:20,0:20:57.20:0,57,1067	0/0:15,0:15:45.15:0,45,835	0/0:46,0:46:99:0,135,2391	0/0:21,0:21:60.21:0,60,1110	0/0:28,0:28:81.27:0,81,1488	1/1:0,34:34:90.10:1324,90,0	0/0:7,0:7:21.07:0,21,393
chr10	49078908	.	C	CAGAG	2321.21	PASS	AB=0.817;AC=40;AF=0.769;AN=52;BaseQRankSum=0.968;DP=390;FS=3.201;HRun=0;HaplotypeScore=99.5981;InbreedingCoeff=0.2467;MQ=46.30;MQ0=3;MQRankSum=-3.336;QD=6.61;ReadPosRankSum=2.681;VQSLOD=2.2171;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:18:2.43:2,0,248	0/0:6,0:6:9.02:0,9,101	0/0:27,0:13:26.50:0,27,244	0/1:33,0:19:6.52:7,0,313	./.	1/1:5,11:16:14.08:286,14,0	1/1:11,11:22:11.76:181,12,0	1/1:13,0:11:9:80,9,0	1/1:3,7:9:3.01:75,3,0	1/1:8,0:7:8.80:80,9,0	./.	1/1:5,0:10:3.01:51,3,0	1/1:10,0:18:11.69:119,12,0	1/1:8,0:7:6:52,6,0	0/1:12,0:10:0.36:0,0,80	1/1:6,15:22:24.80:402,25,0	1/1:2,0:14:18.05:260,18,0	0/1:6,0:10:11.04:47,0,11	0/1:9,1:10:34.44:214,0,34	1/1:10,7:17:8.90:57,9,0	0/1:15,10:21:2.21:2,0,14	0/1:7,0:14:0:0,0,0	1/1:8,0:7:7.18:38,7,0	1/1:1,1:5:6.02:128,6,0	1/1:7,0:7:8.99:76,9,0	1/1:13,0:10:11.59:74,12,0	0/1:8,11:20:11.95:213,0,12	1/1:5,0:4:2.98:22,3,0
chr10	49079004	.	AGAG	A	727.80	PASS	AB=0.982;AC=22;AF=0.440;AN=50;BaseQRankSum=2.466;DP=654;FS=23.141;HRun=0;HaplotypeScore=145.8264;InbreedingCoeff=-0.3901;MQ=20.29;MQ0=179;MQRankSum=-0.883;QD=1.49;ReadPosRankSum=-0.124;VQSLOD=1.1542;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:56,0:27:32.77:33,0,221	0/0:9,0:6:9.35:0,9,90	./.	./.	0/0:13,0:12:8.89:0,9,84	0/1:24,0:13:18.70:42,0,19	1/1:28,0:7:5.55:64,6,0	1/1:18,0:5:4.22:42,4,0	1/1:26,0:9:1.26:69,1,0	0/1:26,0:11:12.26:12,0,169	0/1:10,1:6:14.18:14,0,32	0/1:26,1:19:45.98:46,0,48	0/1:37,1:22:64.89:65,0,113	./.	0/0:32,0:17:27.63:0,28,234	0/1:23,0:12:3.51:103,0,4	0/1:27,0:12:20.09:20,0,62	0/1:13,0:8:19.68:20,0,156	0/1:26,1:16:24.93:25,0,169	0/1:11,1:7:9.47:9,0,10	0/0:48,0:16:9:0,9,105	0/1:39,1:30:66.53:67,0,155	0/1:29,0:19:51.28:51,0,113	0/0:33,0:22:1.40:0,1,48	0/0:12,0:9:9.76:0,10,82	0/1:36,0:14:78.96:79,0,119	0/1:13,0:10:26.74:69,0,27	0/1:15,0:8:44.66:45,0,66
chr10	49079019	.	GGAA	G	1348.85	PASS	AB=0.967;AC=23;AF=0.442;AN=52;BaseQRankSum=3.777;DP=1045;FS=8.147;HRun=0;HaplotypeScore=213.8267;InbreedingCoeff=-0.6234;MQ=19.81;MQ0=335;MQRankSum=-0.458;QD=1.59;ReadPosRankSum=0.476;VQSLOD=1.8381;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:79,1:38:21.16:21,0,346	0/1:12,0:7:16.14:16,0,78	./.	./.	0/0:23,0:16:6.88:0,7,74	0/1:31,3:20:94.70:149,0,95	0/1:56,1:9:24.16:68,0,24	0/1:27,0:9:4.59:5,0,46	0/1:41,4:18:37.58:141,0,38	0/1:51,1:15:15.58:16,0,163	0/1:20,0:9:19.51:20,0,21	0/1:46,1:31:91.81:92,0,105	0/1:54,0:28:54.71:55,0,128	1/1:24,0:7:1.55:4,2,0	0/0:49,0:25:16.98:0,17,228	0/1:39,4:19:55.93:191,0,56	0/1:35,0:13:20.41:20,0,32	0/1:25,1:11:41.80:42,0,196	0/1:38,0:23:66.71:67,0,170	0/1:26,1:15:31.37:60,0,31	0/0:74,0:26:20.93:0,21,167	0/1:48,2:35:99:160,0,169	0/1:33,2:21:63.81:64,0,157	0/0:49,1:27:15.35:0,15,145	0/1:32,0:19:5.98:6,0,47	0/1:62,2:25:91:91,0,211	0/1:16,3:10:3.10:147,0,3	0/1:27,1:11:62.16:63,0,62
chr10	49079029	.	G	GAGA	930.61	PASS	AB=0.993;AC=23;AF=0.442;AN=52;BaseQRankSum=3.646;DP=1171;FS=8.706;HRun=0;HaplotypeScore=276.4932;InbreedingCoeff=-0.5998;MQ=19.71;MQ0=381;MQRankSum=-1.988;QD=0.98;ReadPosRankSum=1.262;VQSLOD=1.2166;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:83,1:38:34.19:34,0,590	0/1:13,0:7:27.71:28,0,158	./.	./.	0/1:26,0:17:19.01:19,0,57	0/1:36,0:23:10.45:10,0,192	0/1:75,0:14:2.17:2,0,106	0/1:28,0:8:16.92:17,0,73	0/1:48,0:20:3.22:3,0,82	0/1:60,0:17:25.30:25,0,146	0/1:23,0:10:4.47:4,0,44	0/1:52,0:36:58.06:58,0,259	0/1:59,1:30:37.62:38,0,176	1/1:28,0:7:2.98:22,3,0	0/1:50,0:25:19.07:19,0,313	0/1:46,1:20:22.10:22,0,59	0/0:36,0:11:15.30:0,15,123	0/0:26,0:12:10.01:0,10,200	0/1:41,0:27:99:112,0,230	0/1:24,0:13:19.53:57,0,20	0/0:83,0:30:20.48:0,20,277	0/1:59,0:38:99:164,0,159	0/1:41,1:26:99:180,0,213	0/1:54,0:29:11.42:11,0,261	0/1:40,1:25:43.71:113,0,44	0/0:71,0:28:4.76:0,5,287	0/1:26,0:14:2.73:3,0,35	0/1:33,2:13:77.58:132,0,78
chr10	49079041	.	G	GAGA	1712.22	PASS	AB=0.993;AC=22;AF=0.423;AN=52;BaseQRankSum=5.690;DP=1244;FS=49.126;HRun=0;HaplotypeScore=318.5115;InbreedingCoeff=-0.6096;MQ=19.90;MQ0=408;MQRankSum=-2.090;QD=1.87;ReadPosRankSum=0.075;VQSLOD=1.1851;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:91,0:42:32.78:0,33,797	0/1:14,1:9:63.33:63,0,179	./.	./.	0/1:29,0:20:31.93:59,0,32	0/1:36,1:24:15.68:16,0,208	0/0:85,0:17:2.75:0,3,173	0/1:25,0:7:2.78:71,0,3	0/1:54,0:22:22.79:94,0,23	0/1:71,0:25:99:138,0,199	0/1:27,0:11:49.20:49,0,62	0/1:55,0:38:86.70:87,0,168	0/1:62,0:31:35.04:35,0,158	1/1:27,0:5:2.98:22,3,0	0/1:52,1:23:86.35:86,0,258	0/1:54,0:24:85.36:102,0,85	0/0:34,0:10:14.37:0,14,103	0/0:27,0:13:15.37:0,15,194	0/1:29,1:18:99:223,0,125	0/1:24,0:13:37.63:38,0,62	0/0:87,1:30:6.02:0,6,346	0/1:63,0:40:99:183,0,198	0/1:49,0:34:99:107,0,282	0/1:55,0:29:38.67:39,0,258	0/1:48,0:32:51.53:195,0,52	0/1:77,0:31:99:128,0,246	0/1:23,0:11:61.96:68,0,62	0/1:36,0:14:57.16:57,0,58
chr10	49079043	.	G	GAA	4257.94	PASS	AB=0.947;AC=25;AF=0.481;AN=52;BaseQRankSum=7.351;DP=1259;FS=61.377;HRun=1;HaplotypeScore=304.5774;InbreedingCoeff=-0.7620;MQ=19.92;MQ0=414;MQRankSum=-1.512;QD=3.57;ReadPosRankSum=-1.854;VQSLOD=0.0256;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:92,1:42:2.44:2,0,888	0/1:13,1:8:61.66:62,0,179	./.	./.	0/1:27,3:21:19.58:234,0,20	0/1:36,0:24:99:136,0,192	0/1:86,0:18:90.32:119,0,90	0/1:25,0:6:9.84:10,0,73	0/1:55,0:22:76.63:83,0,77	0/1:66,5:25:99:485,0,230	0/1:27,2:12:65.64:166,0,66	0/1:49,5:39:99:255,0,368	0/1:54,2:28:98.41:98,0,250	1/1:30,0:7:2.97:27,3,0	0/1:52,0:23:8.52:9,0,340	0/1:54,0:24:87.98:88,0,208	0/0:36,0:10:14.21:0,14,142	0/0:29,0:13:20.43:0,20,215	0/1:24,5:16:99:379,0,112	0/1:22,2:13:42.40:122,0,42	0/1:86,5:33:55.64:56,0,367	0/1:59,4:41:99:411,0,323	0/1:47,3:35:99:267,0,335	0/1:54,1:32:54.81:55,0,276	0/1:45,6:34:54.53:534,0,55	0/1:72,6:32:99:281,0,398	0/1:18,5:11:67.83:304,0,68	0/1:35,1:14:74.29:74,0,81
chr10	49079097	.	GGAA	G	1981.85	PASS	AB=0.963;AC=23;AF=0.411;AN=56;BaseQRankSum=4.835;DP=1002;FS=12.781;HRun=0;HaplotypeScore=289.2810;InbreedingCoeff=-0.4490;MQ=25.89;MQ0=189;MQRankSum=-6.090;QD=2.52;ReadPosRankSum=-0.677;VQSLOD=0.2015;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:71,0:44:76.79:0,77,1731	0/0:15,0:11:21.72:0,22,349	0/0:6,0:1:3.01:0,3,67	0/0:15,0:1:1.25:0,1,3	0/1:28,0:22:31.49:62,0,31	0/1:32,2:26:99:162,0,103	0/1:58,1:38:85.20:85,0,417	0/1:35,0:18:94.94:95,0,190	1/1:28,5:17:15.98:273,16,0	0/1:47,1:31:53.84:54,0,439	0/1:21,0:14:40.38:40,0,70	0/1:28,3:20:45.72:46,0,240	0/1:39,1:23:77.58:78,0,335	0/1:32,2:16:75.35:75,0,105	0/0:34,0:18:19.48:0,19,517	0/1:39,2:26:45.19:223,0,45	1/1:32,0:12:4.75:27,5,0	0/1:21,1:11:32.23:40,0,32	0/1:31,0:20:27.55:28,0,186	0/1:22,1:21:56.59:57,0,148	0/0:53,0:31:13.71:0,14,248	0/1:44,7:40:99:306,0,468	0/1:34,6:32:99:128,0,363	0/1:44,2:32:99:105,0,165	0/1:50,1:45:99:130,0,489	0/1:66,0:46:99:125,0,636	0/1:18,0:14:5.75:6,0,214	0/0:23,0:13:22.14:0,22,196
chr10	49079110	.	A	AAGG	3233.06	PASS	AB=0.961;AC=20;AF=0.357;AN=56;BaseQRankSum=-0.779;DP=800;FS=26.661;HRun=0;HaplotypeScore=255.8332;InbreedingCoeff=0.0659;MQ=29.98;MQ0=83;MQRankSum=-1.634;QD=7.07;ReadPosRankSum=-2.640;VQSLOD=1.5522;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:59,0:43:47.69:0,48,1102	0/0:12,0:11:21.07:0,21,308	0/0:9,0:1:3.01:0,3,38	0/0:23,0:6:8.60:0,9,85	1/1:22,1:19:14.03:144,14,0	0/0:32,0:26:10.45:0,10,266	0/0:40,0:31:8.31:0,8,274	0/1:30,0:22:18.23:408,0,18	0/0:20,0:13:19.47:0,19,113	0/1:25,2:23:99:259,0,274	0/1:14,1:14:21.31:127,0,21	0/1:26,0:22:1.47:1,0,53	0/1:29,0:24:18.59:19,0,117	1/1:22,5:19:24.33:595,24,0	0/0:27,0:18:24.58:0,25,494	0/0:31,0:26:18.73:0,19,246	1/1:28,1:16:20.90:214,21,0	1/1:16,1:11:12.02:181,12,0	0/0:23,0:16:14.98:0,15,196	0/0:25,0:25:13.59:0,14,309	0/1:39,0:26:7.26:8,0,7	0/1:34,0:31:99:99,0,200	0/1:36,0:30:29.44:29,0,130	0/0:37,0:27:11.41:0,11,139	0/1:43,4:43:99:653,0,273	0/1:38,6:37:99:491,0,329	0/1:18,0:16:6.18:6,0,169	0/1:13,2:11:66.66:175,0,67
chr10	49079807	.	GA	G	4223.09	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-4.567;DP=714;FS=3.561;HRun=7;HaplotypeScore=111.1857;InbreedingCoeff=0.9998;MQ=65.92;MQ0=4;MQRankSum=1.247;QD=25.91;ReadPosRankSum=1.397;VQSLOD=4.5513;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,99,1214	0/0:15,0:15:39.12:0,39,490	0/0:38,0:20:49.89:0,50,547	0/0:38,0:26:34.91:0,35,517	0/0:36,0:36:99:0,105,1319	1/1:3,18:21:54.12:551,54,0	1/1:0,18:18:51.12:520,51,0	0/0:36,0:36:84.24:0,84,1019	1/1:2,21:23:60.14:612,60,0	0/0:34,0:34:93.29:0,93,1159	0/0:29,0:29:78.25:0,78,979	0/0:20,0:20:54.16:0,54,666	0/0:28,0:28:84.23:0,84,1028	0/0:13,0:13:33.11:0,33,415	0/0:24,0:24:72.23:0,72,905	1/1:2,17:19:47.96:490,48,0	0/0:39,0:39:99:0,114,1419	0/0:24,0:24:66.19:0,66,814	1/1:4,17:20:45.10:459,45,0	1/1:2,17:19:48.11:490,48,0	1/1:2,11:13:30.07:306,30,0	0/0:26,0:26:72.23:0,72,906	0/0:20,0:20:51.15:0,51,628	0/0:19,0:19:54.17:0,54,678	0/0:28,0:28:78.25:0,78,978	0/0:27,0:27:81.26:0,81,1018	1/1:1,28:29:78.18:795,78,0	0/0:21,0:21:54.17:0,54,677
chr10	49080170	.	AT	A	6588.57	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=7.674;DP=491;FS=1.687;HRun=9;HaplotypeScore=112.9838;InbreedingCoeff=0.8881;MQ=66.31;MQ0=0;MQRankSum=-7.095;QD=16.23;ReadPosRankSum=3.777;VQSLOD=4.6056;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:78.12:0,78,862	0/0:10,0:10:27.08:0,27,310	0/0:13,0:9:2.69:0,3,63	0/0:17,0:13:11.30:0,11,190	1/1:4,18:22:47.97:431,48,0	1/1:4,0:26:39.72:124,40,0	1/1:1,0:8:6.11:18,6,0	1/1:3,24:27:65.96:591,66,0	1/1:0,0:15:30.34:90,30,0	1/1:3,21:23:56.99:514,57,0	1/1:1,16:17:48.03:439,48,0	1/1:1,11:12:33.02:302,33,0	1/1:3,13:16:39.02:356,39,0	1/1:2,8:9:21:192,21,0	0/0:15,0:15:42.05:0,42,448	1/1:0,0:17:30.56:90,31,0	1/1:4,37:41:99:970,108,0	1/1:4,9:13:29.99:268,30,0	1/1:3,0:17:28.55:84,29,0	1/1:3,0:28:39.28:127,39,0	1/1:0,0:3:6.11:18,6,0	1/1:4,4:8:12:109,12,0	1/1:3,8:11:17.99:164,18,0	1/1:1,4:5:14.89:118,15,0	1/1:2,21:22:59.97:536,60,0	1/1:2,23:25:66.02:598,66,0	1/1:0,0:24:36.33:121,36,0	1/1:0,12:12:36.02:330,36,0
chr10	49080216	.	TTGTGTG	T	622.95	PASS	AC=14;AF=0.292;AN=48;BaseQRankSum=5.139;DP=418;FS=7.884;HRun=0;HaplotypeScore=150.5466;InbreedingCoeff=0.7655;MQ=47.26;MQ0=8;MQRankSum=-3.218;QD=6.49;ReadPosRankSum=1.154;VQSLOD=2.1588;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:32:60.21:0,60,1749	0/0:8,0:8:21.07:0,21,584	0/0:20,0:10:6.02:0,6,152	0/0:12,0:8:12.04:0,12,265	0/0:22,0:22:22.47:0,22,396	1/1:7,0:16:2.92:21,3,0	1/1:2,1:8:9.03:137,9,0	0/0:25,0:24:31.30:0,31,557	./.	0/0:24,0:21:42.14:0,42,897	0/0:16,0:15:17.08:0,17,402	1/1:5,2:7:3.01:62,3,0	./.	0/0:8,0:6:6.02:0,6,169	0/0:19,0:20:45.63:0,46,1359	1/1:2,0:4:6.42:23,6,0	0/0:33,0:32:25.32:0,25,851	0/0:14,0:14:21.04:0,21,426	1/1:17,0:16:5.77:66,6,0	1/1:15,1:23:15.19:265,15,0	./.	0/0:3,3:7:0:0,0,0	0/0:4,6:12:0.47:0,0,1	./.	0/0:21,0:20:21.54:0,22,541	0/0:20,0:20:44.92:0,45,888	1/1:13,0:18:20.73:206,21,0	0/0:6,0:6:12.04:0,12,221
chr10	49080237	.	TGTGTGTGA	T	1099.67	PASS	AB=1.000;AC=18;AF=0.360;AN=50;BaseQRankSum=7.216;DP=399;FS=18.156;HRun=0;HaplotypeScore=165.5100;InbreedingCoeff=0.6440;MQ=48.64;MQ0=9;MQRankSum=-6.104;QD=9.32;ReadPosRankSum=-2.122;VQSLOD=1.1892;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:93.21:0,93,2638	0/0:9,0:9:27.07:0,27,734	0/0:13,0:4:2.73:0,3,146	0/0:20,0:13:11.55:0,12,323	0/0:20,0:20:25.45:0,25,451	1/1:13,0:13:3.17:13,3,0	1/1:10,0:8:9.03:134,9,0	0/0:20,0:18:45.63:0,46,667	./.	0/1:26,0:24:47.46:47,0,920	0/0:16,0:15:18.48:0,18,420	1/1:4,0:4:3.01:40,3,0	1/1:2,0:2:2.92:17,3,0	0/0:7,0:5:6.02:0,6,187	0/0:20,0:20:54.61:0,55,1962	1/1:6,0:6:5.25:23,5,0	0/0:30,0:29:11.15:0,11,983	0/0:10,0:10:6.68:0,7,442	1/1:5,1:4:6.90:127,7,0	1/1:18,3:21:17.77:369,18,0	./.	0/1:11,0:11:0.07:0,0,0	0/0:17,0:17:1.31:0,1,2	./.	0/0:21,0:21:18.12:0,18,558	0/0:20,0:20:15.58:0,16,998	1/1:13,6:18:26.54:494,27,0	0/0:5,0:5:15.05:0,15,293
chr10	49080254	.	G	GAC	4176.41	PASS	AB=0.931;AC=35;AF=0.625;AN=56;BaseQRankSum=3.107;DP=503;FS=1.109;HRun=0;HaplotypeScore=207.5352;InbreedingCoeff=0.5268;MQ=60.14;MQ0=11;MQRankSum=-5.578;QD=13.01;ReadPosRankSum=0.914;VQSLOD=3.4138;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:65.25:0,65,1201	0/0:6,0:6:18.05:0,18,250	0/0:46,0:19:7.92:0,8,77	0/0:50,0:21:6.55:0,7,193	0/1:17,6:23:0.44:131,0,0	1/1:19,0:19:2.39:12,2,0	1/1:11,0:8:1.89:11,2,0	1/1:14,0:13:21.71:396,22,0	0/1:10,0:10:0.08:0,0,0	1/1:19,7:25:56.38:865,56,0	1/1:15,6:20:8.12:162,8,0	1/1:5,0:5:1.81:19,2,0	0/1:5,0:5:0.55:24,0,1	1/1:6,2:6:4.86:81,5,0	0/0:24,0:24:66.18:0,66,909	0/0:15,0:15:3.55:0,4,28	1/1:12,10:21:39.84:592,40,0	1/1:4,4:8:10.56:294,11,0	1/1:9,0:8:21.02:169,21,0	1/1:25,0:25:9.78:57,10,0	0/1:4,0:4:0:0,0,0	0/1:12,0:11:0.06:0,0,0	0/1:19,0:19:0:0,0,0	0/0:5,0:4:0:0,0,0	1/1:20,8:28:6.23:261,6,0	1/1:12,9:21:44.20:691,44,0	1/1:23,0:22:24.09:219,24,0	0/1:5,3:8:8.14:191,0,8
chr10	49080262	.	GAGAC	G	416.90	PASS	AB=0.963;AC=16;AF=0.286;AN=56;BaseQRankSum=4.723;DP=549;FS=0.000;HRun=0;HaplotypeScore=253.5986;InbreedingCoeff=-0.0213;MQ=60.30;MQ0=15;MQRankSum=-2.168;QD=1.71;ReadPosRankSum=-5.435;VQSLOD=1.1185;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:87.30:0,87,2143	0/0:5,0:5:15.05:0,15,383	0/1:58,1:23:19.15:19,0,283	0/0:72,0:27:10.36:0,10,345	0/0:19,3:22:6.68:0,7,38	0/0:23,1:24:4.02:0,4,26	0/0:9,0:6:0.47:0,0,1	0/1:13,2:13:32.36:32,0,273	0/1:8,0:8:0.40:1,0,0	0/1:23,4:26:99:165,0,332	0/0:20,3:21:5.11:0,5,72	0/0:4,1:5:0.11:0,0,0	1/1:6,0:6:0.68:28,1,0	0/0:7,1:6:5.97:0,6,87	0/0:24,0:24:66.19:0,66,1529	0/1:19,0:19:26.06:32,0,26	0/0:21,0:20:22.49:0,22,280	0/1:7,0:7:34.45:34,0,101	0/1:11,0:10:16.47:16,0,131	0/1:24,1:25:4.43:4,0,15	1/1:3,0:3:0.47:1,0,0	0/1:14,0:13:0.12:0,0,0	0/1:19,0:19:0.01:0,0,0	0/0:5,1:5:0:0,0,0	0/0:24,3:27:8.70:0,9,138	0/1:18,3:21:99:195,0,229	0/0:25,0:24:20.43:0,20,146	0/1:8,0:8:14.27:14,0,90
chr10	49080264	.	GAC	G	206.49	PASS	AB=0.881;AC=14;AF=0.250;AN=56;BaseQRankSum=6.315;DP=549;FS=4.498;HRun=0;HaplotypeScore=245.1408;InbreedingCoeff=0.0600;MQ=62.21;MQ0=15;MQRankSum=-5.978;QD=1.11;ReadPosRankSum=-2.135;VQSLOD=2.0436;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:86.61:0,87,1534	0/0:5,0:5:15.05:0,15,284	0/0:62,0:24:21.85:0,22,233	0/0:75,0:29:13.33:0,13,293	0/0:21,0:21:7.53:0,8,39	0/0:20,4:24:4.10:0,4,29	0/0:9,0:6:0.47:0,0,1	0/0:15,0:13:4.20:0,4,203	0/1:4,4:8:0.43:1,0,0	0/1:26,0:25:9.60:10,0,230	0/0:23,0:21:1.97:0,2,66	0/0:5,0:5:0.37:0,0,2	1/1:6,0:6:2.99:17,3,0	0/0:8,0:6:0.69:0,1,47	0/0:25,0:25:69.17:0,69,1170	0/1:11,8:19:4.61:40,0,5	0/0:21,0:20:17.90:0,18,198	0/0:7,0:7:0.35:0,0,88	0/1:10,3:12:99:129,0,101	0/1:17,8:25:15.30:39,0,15	1/1:3,0:3:0.47:1,0,0	0/1:14,0:13:0.07:0,0,0	0/1:17,0:17:0.14:0,0,0	0/0:6,0:5:0:0,0,0	0/0:24,0:24:9.11:0,9,122	0/1:22,0:22:50.93:51,0,190	0/1:22,4:25:31.76:32,0,135	0/1:7,0:7:6.46:6,0,76
chr10	49080266	.	C	CAG	2697.42	PASS	AB=0.865;AC=33;AF=0.611;AN=54;BaseQRankSum=7.199;DP=573;FS=15.738;HRun=0;HaplotypeScore=254.8139;InbreedingCoeff=0.4978;MQ=61.84;MQ0=15;MQRankSum=-5.948;QD=6.61;ReadPosRankSum=0.089;VQSLOD=1.9044;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:78.20:0,78,994	0/0:5,0:5:15.05:0,15,194	0/0:66,0:25:12.05:0,12,207	0/1:79,0:29:2.73:3,0,261	0/0:15,7:22:0.36:0,0,1	0/1:19,7:26:0.50:4,0,0	./.	1/1:14,1:13:6.02:91,6,0	0/1:8,1:9:0.08:0,0,0	1/1:23,3:25:60.01:735,60,0	1/1:20,5:23:4.74:68,5,0	0/0:4,1:5:0.73:0,1,2	1/1:3,3:6:4.41:69,4,0	0/1:5,2:6:0.38:1,0,0	0/0:25,0:25:60.19:0,60,773	1/1:15,5:20:0.18:110,0,0	1/1:17,4:20:12.26:133,12,0	1/1:5,2:7:12.02:146,12,0	1/1:12,2:13:5.14:184,5,0	0/1:20,5:25:2.18:9,0,2	0/1:4,0:3:0:0,0,0	0/1:9,6:14:0.06:0,0,0	0/1:13,5:18:0:0,0,0	0/1:5,0:5:0:0,0,0	1/1:21,7:28:4.79:50,5,0	1/1:16,7:23:51.55:727,52,0	1/1:19,8:26:10.22:340,10,0	1/1:6,1:7:12.01:169,12,0
chr10	49080271	.	AGAGATAGT	A	2989.01	PASS	AB=0.910;AC=28;AF=0.519;AN=54;BaseQRankSum=5.219;DP=593;FS=21.807;HRun=0;HaplotypeScore=281.6410;InbreedingCoeff=0.0043;MQ=63.99;MQ0=16;MQRankSum=-3.262;QD=6.89;ReadPosRankSum=1.241;VQSLOD=1.1742;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:81.27:0,81,3203	0/0:5,0:5:15.05:0,15,568	0/0:77,0:31:20.01:0,20,603	0/1:94,0:32:4.69:5,0,617	1/1:18,3:21:1.29:6,1,0	0/1:23,0:23:3.95:4,0,25	./.	0/1:14,0:12:14.78:44,0,15	1/1:9,0:9:4.26:12,4,0	0/1:20,7:26:99:827,0,161	1/1:18,7:24:5.27:98,5,0	0/0:4,1:5:5.40:0,5,25	0/1:6,1:7:13.39:116,0,13	1/1:7,0:6:1.69:58,2,0	0/0:25,0:25:66.70:0,67,2463	0/1:21,0:21:36.77:154,0,37	1/1:15,1:15:13.97:210,14,0	0/1:6,1:7:16.53:144,0,17	0/1:15,0:14:99:147,0,282	0/1:24,0:24:16.45:16,0,30	0/0:4,0:3:0.47:0,0,1	0/1:10,4:13:0:1,0,0	0/1:16,3:19:0.74:1,0,1	0/1:3,2:5:0:0,0,0	1/1:22,5:27:9.18:61,9,0	0/1:20,4:24:99:613,0,158	0/1:28,0:28:46.51:414,0,47	1/1:3,2:5:14.97:210,15,0
chr10	49080274	.	GAT	G	1099.98	PASS	AB=0.907;AC=27;AF=0.500;AN=54;BaseQRankSum=6.834;DP=603;FS=2.752;HRun=0;HaplotypeScore=269.0139;InbreedingCoeff=0.2409;MQ=64.30;MQ0=13;MQRankSum=-5.327;QD=3.67;ReadPosRankSum=2.209;VQSLOD=2.6650;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:81.11:0,81,1498	0/0:5,0:5:15.05:0,15,281	0/0:83,0:33:44.66:0,45,489	0/0:100,0:35:31.19:0,31,427	0/1:21,0:21:0.06:0,0,0	0/0:19,4:23:4.36:0,4,29	./.	0/0:13,0:12:4.82:0,5,17	0/1:7,2:9:0.43:1,0,0	0/1:23,2:24:99:324,0,101	1/1:24,1:24:2.80:39,3,0	0/0:4,1:5:0.37:0,0,2	1/1:7,1:8:3.98:64,4,0	1/1:4,2:6:0.98:39,1,0	0/0:26,0:26:72.20:0,72,1255	1/1:18,5:23:2.35:72,2,0	0/1:10,3:13:0.57:55,0,1	0/1:7,0:7:6.35:50,0,6	0/1:13,2:14:76.36:76,0,84	1/1:22,3:25:3.36:23,3,0	1/1:3,2:4:2.29:7,2,0	0/1:13,1:13:0.09:0,0,0	0/1:15,3:19:0.18:0,0,1	0/0:5,0:5:0:0,0,0	1/1:23,3:26:2.10:6,2,0	0/1:23,2:25:84.06:198,0,84	1/1:22,5:27:3.13:242,3,0	1/1:6,1:7:0.04:41,0,0
chr10	49080275	.	ATAGT	A	764.27	PASS	AB=0.990;AC=21;AF=0.389;AN=54;BaseQRankSum=6.250;DP=581;FS=11.586;HRun=0;HaplotypeScore=270.1564;InbreedingCoeff=-0.0895;MQ=65.20;MQ0=13;MQRankSum=-3.243;QD=2.11;ReadPosRankSum=0.754;VQSLOD=0.5909;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:81.27:0,81,2202	0/0:5,0:5:15.04:0,15,372	0/1:83,0:34:6.22:6,0,636	0/0:98,0:35:13.05:0,13,492	0/1:20,1:21:0.01:2,0,0	0/0:22,0:22:6.58:0,7,44	./.	0/1:9,0:8:1.13:5,0,1	0/0:9,0:9:1.83:0,2,13	0/1:22,1:23:95.23:288,0,95	1/1:23,1:23:6.52:54,7,0	0/0:5,0:5:4.31:0,4,22	0/1:8,0:8:10.75:25,0,11	1/1:6,0:6:2.19:21,2,0	0/0:25,0:25:72.25:0,72,1911	0/1:23,0:23:13.46:13,0,42	0/1:13,0:13:16.85:73,0,17	0/1:6,0:6:15.52:42,0,16	0/1:13,0:12:39.68:40,0,246	0/1:24,0:24:8.83:9,0,19	0/0:5,0:4:1.31:0,1,5	0/1:13,0:12:0.12:0,0,0	0/1:17,0:17:0.60:1,0,2	0/0:5,0:5:0:0,0,0	1/1:24,1:25:7.34:55,7,0	0/1:22,1:23:99:107,0,174	0/1:23,0:23:73.03:109,0,73	0/1:7,0:7:16.63:55,0,17
chr10	49080292	.	G	GAC	1586.66	PASS	AB=0.867;AC=21;AF=0.375;AN=56;BaseQRankSum=5.714;DP=627;FS=33.530;HRun=0;HaplotypeScore=297.9611;InbreedingCoeff=-0.0778;MQ=53.46;MQ0=18;MQRankSum=-6.185;QD=5.20;ReadPosRankSum=3.420;VQSLOD=1.2003;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:90.23:0,90,1271	0/0:5,0:5:15.04:0,15,208	0/0:69,0:23:30.81:0,31,415	0/0:89,0:25:25.20:0,25,239	0/0:28,4:32:0.36:0,0,1	0/1:6,10:22:20.34:28,0,20	0/1:10,2:9:0:0,0,0	0/1:15,0:11:13.27:13,0,48	1/1:2,3:9:2.88:54,3,0	0/1:27,1:28:99:310,0,336	1/1:25,3:26:2.83:38,3,0	0/1:4,3:7:18.24:40,0,18	1/1:4,6:10:7.38:78,7,0	0/0:10,1:10:5.85:0,6,29	0/0:25,0:25:69.20:0,69,1002	0/1:5,5:22:64.01:106,0,64	0/1:13,1:14:14.35:14,0,33	0/1:8,0:8:35.92:36,0,46	0/1:10,3:13:72.52:239,0,73	0/0:9,8:26:4.63:0,5,43	0/0:5,0:5:2.03:0,2,5	0/1:10,4:13:0.10:0,0,0	0/0:19,3:22:1.13:0,1,3	0/1:9,0:9:0:0,0,0	0/1:23,3:25:0.15:0,0,1	0/1:29,5:34:99:402,0,363	0/1:8,7:21:27.06:299,0,27	0/1:10,1:10:69.20:70,0,69
chr10	49080294	.	GAC	G	226.77	PASS	AB=0.986;AC=25;AF=0.446;AN=56;BaseQRankSum=6.767;DP=604;FS=3.520;HRun=0;HaplotypeScore=284.0066;InbreedingCoeff=0.1450;MQ=50.30;MQ0=18;MQRankSum=-4.711;QD=0.72;ReadPosRankSum=-1.098;VQSLOD=2.3105;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:86.81:0,87,1471	0/0:5,0:5:15.05:0,15,272	0/0:63,0:20:35.31:0,35,383	0/0:86,0:24:17.12:0,17,211	1/1:32,0:31:1.53:4,2,0	1/1:21,0:21:7.87:45,8,0	0/0:11,0:7:0:0,0,0	0/1:16,0:12:16.98:17,0,169	1/1:9,0:9:1.13:4,1,0	0/1:27,2:29:33.22:33,0,299	1/1:29,0:27:2.60:10,3,0	0/1:6,0:6:2.95:3,0,11	0/0:11,0:11:9.74:0,10,51	0/1:9,1:9:10.55:11,0,23	0/0:25,0:25:69.15:0,69,1174	0/1:22,0:22:1.73:75,0,2	0/0:10,1:11:9.49:0,9,110	0/1:7,0:7:19.20:19,0,20	0/1:12,0:11:47.98:48,0,111	1/1:23,0:23:3.72:13,4,0	1/1:7,0:5:3.15:12,3,0	0/1:15,0:14:0.10:0,0,0	0/1:20,0:20:0.19:0,0,0	0/0:8,1:9:0:0,0,0	1/1:27,0:26:1.22:4,1,0	0/0:32,0:32:13.75:0,14,335	0/1:19,0:19:14.11:63,0,14	0/1:11,0:10:8.34:8,0,131
chr10	49080298	.	GAC	G	550.15	PASS	AB=0.897;AC=16;AF=0.286;AN=56;BaseQRankSum=2.321;DP=596;FS=14.259;HRun=0;HaplotypeScore=293.8310;InbreedingCoeff=0.0109;MQ=48.31;MQ0=17;MQRankSum=-4.962;QD=1.76;ReadPosRankSum=-1.369;VQSLOD=0.8758;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:77.96:0,78,1503	0/0:5,0:5:14.84:0,15,234	0/1:53,0:17:35.86:36,0,142	0/0:71,1:22:0.22:0,0,71	1/1:24,9:32:1.53:4,2,0	0/1:21,0:21:6.95:7,0,47	0/0:11,0:7:0:0,0,0	0/0:17,1:14:25.63:0,26,155	0/0:9,0:9:2.01:0,2,27	0/1:25,5:30:99:206,0,215	1/1:22,9:29:2.60:13,3,0	0/1:6,1:7:11.11:38,0,11	0/0:11,0:11:9.90:0,10,52	0/0:9,2:10:5.95:0,6,27	0/0:21,0:21:59.94:0,60,1109	0/0:22,0:22:12.58:0,13,149	0/0:11,0:11:9.35:0,9,58	0/1:6,2:8:26.69:48,0,27	0/0:15,0:14:13.77:0,14,182	0/0:25,0:25:5.45:0,5,58	0/0:9,0:6:2.12:0,2,19	0/1:15,1:15:0.10:0,0,0	0/1:18,4:22:0.38:0,0,0	0/0:9,0:9:0:0,0,0	1/1:19,7:25:1.22:4,1,0	0/1:25,7:32:99:242,0,312	0/1:22,0:22:12.10:12,0,198	0/1:9,2:10:51.82:67,0,52
chr10	49080312	.	C	CAG	263.77	PASS	AB=0.975;AC=13;AF=0.232;AN=56;BaseQRankSum=2.358;DP=554;FS=7.408;HRun=0;HaplotypeScore=300.8392;InbreedingCoeff=0.0416;MQ=38.11;MQ0=15;MQRankSum=-4.015;QD=1.09;ReadPosRankSum=-0.106;VQSLOD=1.0321;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:72.21:0,72,887	0/0:4,0:4:12.04:0,12,150	0/0:22,0:7:5.79:0,6,37	0/0:35,0:7:0:0,0,0	0/0:33,0:32:0.36:0,0,1	0/1:22,2:24:23.62:24,0,64	0/1:12,0:9:0.02:0,0,0	0/0:23,0:19:27.02:0,27,313	1/1:8,1:9:0.76:2,1,0	0/1:30,0:30:99:119,0,289	0/0:32,0:30:0.47:0,0,1	0/0:8,0:8:6.21:0,6,22	0/0:11,0:11:8.68:0,9,46	0/0:11,0:10:3.53:0,4,39	0/0:22,0:22:60.19:0,60,762	0/1:22,1:23:3.67:4,0,141	0/1:11,0:11:13:13,0,73	0/0:9,0:9:6.24:0,6,86	0/1:23,2:23:39.08:39,0,426	0/0:25,0:25:7.74:0,8,60	0/0:8,0:6:3:0,3,25	0/1:16,0:15:0.10:0,0,0	0/0:22,0:22:1.15:0,1,3	0/1:9,0:9:0:0,0,0	0/1:29,0:28:0.15:0,0,1	0/1:32,0:32:95.09:95,0,306	0/1:19,2:21:81.56:82,0,173	0/0:11,0:10:9.22:0,9,101
chr10	49080322	.	GAC	G	335.06	PASS	AB=0.952;AC=23;AF=0.411;AN=56;BaseQRankSum=4.312;DP=520;FS=11.533;HRun=0;HaplotypeScore=296.4077;InbreedingCoeff=-0.0879;MQ=32.44;MQ0=13;MQRankSum=-6.739;QD=0.85;ReadPosRankSum=-0.584;VQSLOD=0.9910;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:80.54:0,81,1310	0/0:4,0:4:12.04:0,12,212	0/0:9,0:2:5.49:0,5,34	0/0:9,0:1:2.92:0,3,17	1/1:33,3:35:1.53:4,2,0	0/1:25,0:25:13.95:60,0,14	0/1:10,0:9:0.03:0,0,0	0/1:24,1:19:38.68:39,0,322	0/1:10,0:10:6.94:11,0,7	0/1:27,3:30:48.70:49,0,219	0/1:26,3:27:0.19:0,0,0	1/1:7,1:8:2.86:36,3,0	0/0:11,1:12:1.52:0,2,30	0/1:10,2:11:16.07:16,0,33	0/0:26,0:26:75.13:0,75,1200	0/1:21,0:21:2.55:3,0,80	0/1:12,0:12:20.76:21,0,60	0/1:8,0:8:6.48:6,0,62	0/0:25,0:23:30.88:0,31,570	0/1:27,0:26:1.82:2,0,15	0/0:10,0:7:2.24:0,2,9	0/1:13,1:14:0.10:0,0,0	0/1:20,2:22:0.28:0,0,0	0/1:7,2:9:0:0,0,0	1/1:27,1:27:1.22:4,1,0	0/1:29,2:31:99:127,0,101	0/1:23,0:23:5.29:5,0,255	0/1:11,0:10:7.89:79,0,8
chr10	49080324	.	CAGAGAG	C	117.25	PASS	AB=0.970;AC=16;AF=0.286;AN=56;BaseQRankSum=3.692;DP=531;FS=10.771;HRun=0;HaplotypeScore=322.8792;InbreedingCoeff=0.1085;MQ=32.38;MQ0=14;MQRankSum=-5.744;QD=0.47;ReadPosRankSum=-1.610;VQSLOD=0.8000;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:84.19:0,84,2126	0/0:4,0:4:12.02:0,12,225	0/0:9,0:2:3.01:0,3,52	0/0:11,0:1:3.01:0,3,41	1/1:35,2:36:4.95:14,5,0	0/0:25,0:25:15.40:0,15,178	0/0:10,0:9:1.25:0,1,4	0/0:25,0:19:22.91:0,23,626	0/0:9,0:9:0.55:0,1,37	0/1:31,0:31:81.34:81,0,538	1/1:30,0:28:0.03:1,0,0	0/1:6,1:7:13.16:13,0,57	0/1:14,0:14:13.42:13,0,178	0/0:13,0:12:6.49:0,6,77	0/0:26,0:26:72.21:0,72,2023	0/0:20,0:20:19.50:0,20,377	0/0:13,0:13:1.84:0,2,106	0/1:7,1:8:48.77:49,0,102	0/0:25,0:23:53.74:0,54,678	0/0:26,0:25:5.78:0,6,72	0/0:10,0:7:2.79:0,3,34	0/1:15,0:14:0.31:0,0,0	1/1:23,0:23:0.69:3,1,0	0/1:9,0:9:0:0,0,0	1/1:30,1:30:1.64:6,2,0	0/1:32,0:32:56.50:56,0,561	0/0:23,0:23:38.17:0,38,472	0/1:12,0:11:0.70:1,0,133
chr10	49080330	.	GAGAC	G	632.40	PASS	AB=0.929;AC=22;AF=0.393;AN=56;BaseQRankSum=3.318;DP=526;FS=15.520;HRun=0;HaplotypeScore=321.1427;InbreedingCoeff=0.0187;MQ=32.47;MQ0=15;MQRankSum=-4.967;QD=1.90;ReadPosRankSum=0.919;VQSLOD=0.9970;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:69.16:0,69,1568	0/0:4,0:4:8.99:0,9,128	0/0:3,0:1:3.01:0,3,50	0/0:8,0:1:3.01:0,3,61	1/1:31,7:37:1.57:6,2,0	0/0:23,0:25:21.88:0,22,162	0/1:10,0:9:0.26:0,0,0	0/0:23,0:18:34.76:0,35,470	0/0:10,0:11:3.90:0,4,20	0/1:29,4:33:99:215,0,379	0/1:24,5:27:0.02:0,0,0	0/1:7,1:8:44.40:44,0,45	0/0:15,0:15:6.89:0,7,156	0/1:13,2:14:40.12:40,0,43	0/0:24,0:24:69.16:0,69,1598	0/0:21,0:22:2.03:0,2,198	0/1:12,0:12:31.19:31,0,82	0/1:8,1:9:37.69:38,0,64	0/1:23,0:21:20.49:20,0,308	1/1:22,0:23:8.07:52,8,0	1/1:10,0:7:3.37:17,3,0	0/1:15,0:14:0.19:0,0,0	1/1:20,2:23:0.51:2,1,0	0/1:9,0:9:0:0,0,0	1/1:26,3:28:0.66:4,1,0	0/1:28,5:33:99:264,0,440	0/0:22,0:24:0.93:0,1,239	0/1:11,2:12:34.31:34,0,77
chr10	49080332	.	GAC	G	341.40	PASS	AB=0.989;AC=22;AF=0.393;AN=56;BaseQRankSum=4.908;DP=529;FS=31.378;HRun=0;HaplotypeScore=318.4927;InbreedingCoeff=0.0610;MQ=32.16;MQ0=16;MQRankSum=-6.250;QD=0.91;ReadPosRankSum=2.053;VQSLOD=1.3205;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:69.16:0,69,1213	0/0:4,0:4:8.99:0,9,105	0/0:3,0:1:2.99:0,3,23	0/0:8,0:1:3.01:0,3,56	1/1:38,1:37:1.53:5,2,0	0/1:25,0:25:25.08:47,0,25	0/1:10,0:9:0.03:0,0,0	0/0:23,0:18:34.44:0,34,350	1/1:11,0:11:5.46:38,5,0	0/1:32,0:32:65.77:66,0,339	0/1:28,1:27:0.19:0,0,0	0/1:10,0:10:7.21:7,0,26	0/0:15,0:15:19.73:0,20,163	0/1:15,1:15:12.79:13,0,58	0/0:23,0:23:69.14:0,69,1181	0/1:21,0:21:56.47:56,0,103	0/0:11,0:11:7.92:0,8,106	0/0:9,0:9:3.84:0,4,91	0/1:22,1:21:98.46:98,0,143	1/1:23,1:23:7.87:50,8,0	1/1:10,0:7:3.43:20,3,0	0/1:17,0:15:0.10:0,0,0	0/1:24,0:24:0.28:0,0,1	0/0:10,0:10:2.58:0,3,11	1/1:30,0:29:1.22:4,1,0	0/1:33,0:33:46.82:47,0,320	0/1:23,0:23:30.84:31,0,58	0/0:14,0:13:1.81:0,2,96
chr10	49080334	.	CAG	C	585.25	PASS	AB=0.972;AC=23;AF=0.411;AN=56;BaseQRankSum=4.481;DP=526;FS=21.149;HRun=0;HaplotypeScore=321.7400;InbreedingCoeff=0.2368;MQ=31.89;MQ0=15;MQRankSum=-4.859;QD=1.69;ReadPosRankSum=-0.054;VQSLOD=0.6206;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:60.21:0,60,1020	0/0:3,0:3:3.01:0,3,52	0/0:3,0:1:3.01:0,3,44	0/0:8,0:1:3.01:0,3,52	1/1:38,0:37:1.52:5,2,0	0/0:15,9:24:5.18:0,5,45	0/1:9,1:9:0.03:0,0,0	0/0:20,0:15:7.66:0,8,254	1/1:8,3:11:2.45:40,2,0	0/1:31,0:31:84.47:84,0,273	0/1:30,0:28:0.19:0,0,0	0/1:12,0:12:0.71:1,0,42	0/0:15,0:15:1.63:0,2,138	0/0:18,0:17:0.60:0,1,44	0/0:22,0:22:57.18:0,57,960	0/1:17,4:21:44.39:107,0,44	0/0:11,0:11:11.31:0,11,121	0/1:10,0:10:4.88:5,0,61	1/1:15,5:19:7.86:235,8,0	1/1:20,5:24:5.89:51,6,0	1/1:9,1:7:3.43:19,3,0	0/1:17,0:15:0.10:0,0,0	0/1:24,0:24:0.28:0,0,1	0/0:10,0:10:2.74:0,3,12	1/1:30,0:29:1.22:4,1,0	0/1:35,0:35:61.31:61,0,386	1/1:18,4:22:8.13:111,8,0	0/0:15,0:14:9.34:0,9,117
chr10	49080342	.	GAC	G	1031.21	PASS	AB=0.880;AC=27;AF=0.482;AN=56;BaseQRankSum=4.263;DP=498;FS=8.862;HRun=0;HaplotypeScore=299.7602;InbreedingCoeff=-0.0228;MQ=31.57;MQ0=24;MQRankSum=-6.096;QD=2.57;ReadPosRankSum=0.247;VQSLOD=0.8632;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:69.16:0,69,1191	0/0:1,0:1:3.01:0,3,58	0/0:6,0:1:3.01:0,3,57	0/0:15,0:1:3.01:0,3,42	1/1:33,3:35:2.05:6,2,0	1/1:12,11:23:10.91:88,11,0	0/1:8,1:8:0.03:0,0,0	0/0:13,0:9:12.75:0,13,257	1/1:5,5:10:5.51:48,6,0	0/1:27,4:30:99:186,0,257	0/1:21,2:22:0.19:0,0,0	0/1:12,0:12:9.26:9,0,52	0/1:13,2:15:61.43:61,0,119	0/1:16,2:17:7.46:7,0,27	0/0:21,0:21:60.19:0,60,1110	1/1:9,11:20:2.26:111,2,0	0/1:8,1:9:3.09:3,0,99	0/1:8,2:10:18.98:19,0,63	0/1:12,2:13:5.55:180,0,6	0/1:17,10:26:2.55:48,0,3	1/1:9,1:7:3.01:37,3,0	0/1:12,2:12:0.08:0,0,0	0/1:20,2:22:0.28:0,0,1	0/0:8,0:8:2.64:0,3,12	1/1:25,3:27:1.22:4,1,0	0/1:29,5:34:99:199,0,358	0/1:13,9:22:17.30:131,0,17	0/1:15,0:14:32.15:32,0,51
chr10	49080344	.	CAGACAG	C	1611.59	PASS	AB=0.945;AC=27;AF=0.482;AN=56;BaseQRankSum=2.983;DP=488;FS=6.410;HRun=0;HaplotypeScore=305.0324;InbreedingCoeff=-0.2251;MQ=31.67;MQ0=27;MQRankSum=-4.949;QD=4.09;ReadPosRankSum=-3.955;VQSLOD=1.1123;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:69.08:0,69,2180	0/0:1,0:1:3.01:0,3,107	0/0:6,0:1:3.01:0,3,85	0/0:17,0:1:3.01:0,3,74	1/1:28,4:31:6.94:27,7,0	1/1:24,0:24:0.45:49,0,0	0/0:8,0:7:1.25:0,1,3	0/1:12,0:8:32.79:33,0,78	0/1:9,0:9:10.85:11,0,23	0/1:29,2:30:99:350,0,155	1/1:22,1:21:0.03:1,0,0	0/1:8,4:12:47.27:74,0,47	0/1:14,2:16:72.26:242,0,72	0/1:15,3:17:4:11,0,4	0/0:22,0:22:66.21:0,66,2011	0/1:17,0:17:17.90:18,0,99	0/1:9,0:9:23.86:48,0,24	0/1:9,1:10:41.59:90,0,42	0/1:13,0:12:93.19:93,0,173	0/1:26,0:25:11.75:32,0,12	1/1:7,0:6:2.94:18,3,0	1/1:15,0:13:0.14:1,0,0	0/1:20,1:21:0.38:2,0,0	0/0:7,0:7:2.74:0,3,12	1/1:25,3:27:1.64:6,2,0	0/1:31,2:33:99:313,0,198	0/1:23,0:22:99:118,0,113	0/1:14,1:14:0.08:214,0,0
chr10	49080346	.	GAC	G	722.31	PASS	AB=0.992;AC=25;AF=0.446;AN=56;BaseQRankSum=4.525;DP=484;FS=9.041;HRun=0;HaplotypeScore=289.2543;InbreedingCoeff=-0.1622;MQ=31.88;MQ0=26;MQRankSum=-5.668;QD=1.84;ReadPosRankSum=-1.175;VQSLOD=0.9485;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:69.21:0,69,1260	0/0:4,0:4:9.01:0,9,119	0/0:6,0:1:3.01:0,3,58	0/0:20,0:1:3.01:0,3,41	1/1:31,0:30:1.58:5,2,0	0/1:24,0:24:5.13:48,0,5	0/1:8,0:7:0.03:0,0,0	0/1:12,0:8:6:6,0,91	0/1:9,0:9:2.77:11,0,3	0/1:29,1:29:99:165,0,140	0/1:22,0:20:0.19:0,0,0	0/1:12,0:12:10.67:24,0,11	0/1:15,1:16:25.78:70,0,26	0/1:17,0:16:6.72:13,0,7	0/0:22,0:22:66.21:0,66,1198	0/1:17,0:17:15.49:15,0,49	0/1:8,0:8:21.71:22,0,59	0/1:9,0:9:15.90:16,0,46	0/1:13,0:12:33.77:34,0,98	0/1:26,0:25:4.44:33,0,4	1/1:6,0:6:2.94:18,3,0	0/1:15,0:13:0.06:0,0,0	0/1:21,0:21:0.28:0,0,1	0/0:7,0:7:2.58:0,3,10	0/1:26,0:25:0.33:0,0,0	0/1:31,2:33:99:207,0,151	0/1:23,0:22:25.36:25,0,123	1/1:15,0:14:10.33:146,10,0
chr10	49080348	.	CAG	C	1164.04	PASS	AB=0.858;AC=26;AF=0.464;AN=56;BaseQRankSum=3.534;DP=479;FS=7.277;HRun=0;HaplotypeScore=280.7793;InbreedingCoeff=-0.0644;MQ=34.07;MQ0=26;MQRankSum=-6.185;QD=3.15;ReadPosRankSum=-0.575;VQSLOD=0.7466;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:33:66.22:0,66,1094	0/0:5,0:5:11.78:0,12,151	0/0:7,0:1:3.01:0,3,51	0/0:22,0:2:3.01:0,3,50	1/1:28,2:29:1.58:5,2,0	1/1:17,6:23:13.20:136,13,0	0/1:8,0:7:0.03:0,0,0	0/0:12,0:8:8.96:0,9,102	0/1:7,2:9:17.91:27,0,18	0/1:25,4:28:99:172,0,188	0/1:18,2:18:0.19:0,0,0	0/1:11,1:12:23.01:23,0,31	0/1:12,4:16:18.31:137,0,18	1/1:14,3:16:0.24:0,0,0	0/0:23,0:23:66.21:0,66,1066	0/1:12,4:16:22.07:56,0,22	0/1:5,3:8:26.21:26,0,78	0/1:9,0:9:19.91:36,0,20	0/1:10,3:12:67.53:68,0,115	0/1:18,7:24:5.86:28,0,6	1/1:4,2:6:2.99:24,3,0	0/1:13,0:11:0.04:0,0,0	0/1:16,5:21:0.28:0,0,1	0/0:7,0:7:2.74:0,3,12	0/1:19,5:23:0.33:0,0,0	0/1:28,5:33:99:270,0,138	0/1:16,7:22:44.03:44,0,157	1/1:9,6:14:10.69:251,11,0
chr10	49080360	.	CAG	C	73.78	PASS	AB=0.995;AC=16;AF=0.286;AN=56;BaseQRankSum=4.641;DP=453;FS=6.146;HRun=0;HaplotypeScore=241.4294;InbreedingCoeff=0.1149;MQ=41.85;MQ0=31;MQRankSum=-5.238;QD=0.33;ReadPosRankSum=0.914;VQSLOD=2.0452;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:78.26:0,78,1286	0/0:5,0:5:12.04:0,12,198	0/0:17,0:3:9:0,9,123	0/1:32,0:8:7.68:8,0,84	1/1:30,0:29:1.30:4,1,0	0/0:14,0:14:3.83:0,4,9	0/0:5,0:5:2.92:0,3,47	0/0:9,0:4:5.91:0,6,38	0/0:8,0:8:6.77:0,7,39	0/0:30,0:29:0.83:0,1,277	0/1:17,0:15:0.24:0,0,0	0/0:12,0:12:4.95:0,5,25	0/1:12,0:12:32.76:35,0,33	0/0:16,0:15:2.91:0,3,33	0/0:26,0:26:66.23:0,66,1124	0/0:9,0:9:1.60:0,2,4	0/1:9,0:9:3.57:4,0,31	0/0:7,0:7:1.48:0,1,76	0/0:13,0:11:15.23:0,15,98	0/0:18,4:21:4.31:0,4,17	1/1:6,1:7:1.98:7,2,0	0/1:10,0:9:0.01:0,0,0	0/1:14,0:14:0.21:0,0,1	0/1:6,0:6:0:0,0,0	0/1:22,0:20:0.28:0,0,0	0/1:29,0:28:54.62:55,0,147	0/1:19,1:19:13.65:14,0,85	1/1:14,0:13:0.17:59,0,0
chr10	49080362	.	G	GAC	131	PASS	AB=0.981;AC=14;AF=0.250;AN=56;BaseQRankSum=3.747;DP=450;FS=2.695;HRun=0;HaplotypeScore=236.4996;InbreedingCoeff=0.0597;MQ=41.88;MQ0=32;MQRankSum=-5.943;QD=0.67;ReadPosRankSum=-1.556;VQSLOD=2.6531;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:81.24:0,81,1182	0/0:5,0:5:12.04:0,12,183	0/0:19,0:4:12.02:0,12,157	0/0:32,0:8:6.90:0,7,92	0/0:29,1:29:0.84:0,1,3	0/0:14,0:14:11.81:0,12,162	0/0:5,0:5:2.63:0,3,43	0/1:12,0:6:10.05:10,0,31	0/0:7,0:7:8.91:0,9,80	0/1:29,0:28:2.12:2,0,445	0/0:17,1:15:0.36:0,0,0	0/1:12,0:12:10.34:10,0,29	0/1:12,0:12:4.83:5,0,166	0/0:16,1:16:4.86:0,5,58	0/0:26,0:26:72.22:0,72,1057	0/0:9,0:9:8.93:0,9,102	0/1:9,0:9:12.51:13,0,69	0/0:7,0:7:17.95:0,18,212	0/0:11,0:9:19.13:0,19,107	1/1:21,0:20:5.20:15,5,0	1/1:7,0:7:1.76:5,2,0	0/1:11,0:9:0:1,0,0	0/0:11,0:12:0.26:0,0,1	0/0:6,0:6:2.84:0,3,14	0/1:23,0:21:0.17:0,0,1	0/1:25,2:26:82.90:83,0,340	0/1:19,0:18:20.53:21,0,41	0/1:12,2:13:92.62:93,0,140
chr10	49080366	.	GAGAAAC	G	1093.15	PASS	AB=0.935;AC=16;AF=0.286;AN=56;BaseQRankSum=3.049;DP=439;FS=6.373;HRun=0;HaplotypeScore=236.2068;InbreedingCoeff=0.0036;MQ=43.83;MQ0=28;MQRankSum=-6.582;QD=5.18;ReadPosRankSum=1.521;VQSLOD=2.0082;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:93.78:0,94,2660	0/0:5,0:5:12.04:0,12,419	0/0:23,0:5:7.53:0,8,187	0/1:34,0:9:8.83:9,0,101	0/0:24,2:26:3.79:0,4,11	0/0:12,0:12:12.92:0,13,149	0/0:5,0:5:3.72:0,4,52	0/0:10,0:7:2.94:0,3,18	0/0:7,0:7:5.93:0,6,52	0/1:23,3:25:99:196,0,458	0/0:14,4:15:4.95:0,5,13	1/1:11,1:12:1.87:12,2,0	0/1:12,0:12:29.38:29,0,30	0/1:14,2:15:21.04:21,0,62	0/0:24,0:24:66.23:0,66,2097	0/0:10,0:10:8.97:0,9,93	1/1:7,1:8:13.65:148,14,0	0/1:6,1:7:50.42:50,0,62	0/1:13,0:11:54.99:101,0,55	0/1:21,0:21:22.15:27,0,22	0/0:7,0:7:0:0,0,0	0/0:10,1:9:0.47:0,0,2	0/0:12,1:13:2.69:0,3,8	0/1:4,1:5:0:0,0,0	0/0:19,2:20:1.15:0,1,3	0/1:20,4:23:99:298,0,307	0/1:20,0:19:34.07:124,0,34	1/1:12,1:13:6.30:222,6,0
chr10	49080368	.	GAAAC	G	690.33	PASS	AB=0.859;AC=11;AF=0.196;AN=56;BaseQRankSum=2.581;DP=432;FS=1.512;HRun=0;HaplotypeScore=224.4220;InbreedingCoeff=-0.0355;MQ=45.60;MQ0=28;MQRankSum=-4.371;QD=4.45;ReadPosRankSum=0.121;VQSLOD=2.4957;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:97.20:0,97,2245	0/0:5,0:5:12.04:0,12,332	0/0:24,0:6:7.54:0,8,165	0/0:36,0:11:7.08:0,7,113	0/0:23,0:23:3.92:0,4,11	0/0:10,0:11:12.92:0,13,132	0/0:5,0:5:2.47:0,2,36	0/0:10,0:7:2.94:0,3,18	0/0:7,0:7:5.93:0,6,50	0/1:26,0:26:50.45:50,0,528	0/0:16,0:14:4.42:0,4,11	0/0:11,1:12:4.65:0,5,15	0/0:12,0:12:16.89:0,17,110	0/1:16,0:15:20.13:20,0,71	0/0:23,0:23:66.23:0,66,1697	0/0:10,0:10:8.91:0,9,75	0/1:8,0:8:3.87:116,0,4	0/1:5,0:7:5.02:5,0,45	0/1:9,2:9:1.79:181,0,2	0/1:13,7:21:22.37:33,0,22	0/1:5,2:7:0.11:0,0,0	0/0:9,1:9:0.88:0,1,3	0/0:12,0:13:2.89:0,3,8	0/1:3,1:4:0:0,0,0	0/0:20,0:19:0.52:0,1,2	0/1:21,0:21:99:116,0,315	0/1:12,7:18:12.07:209,0,12	0/1:11,1:13:41.53:85,0,42
chr10	49080376	.	G	GAGAGAC	949.50	PASS	AB=1.000;AC=12;AF=0.222;AN=54;BaseQRankSum=1.775;DP=421;FS=2.786;HRun=0;HaplotypeScore=217.4203;InbreedingCoeff=0.3325;MQ=52.22;MQ0=24;MQRankSum=-3.677;QD=7.30;ReadPosRankSum=-1.928;VQSLOD=2.0868;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:81.28:0,81,1697	0/0:6,0:6:14.68:0,15,236	0/0:28,0:8:23.17:0,23,230	0/0:47,0:15:7.82:0,8,104	0/1:20,0:20:0.64:1,0,2	0/0:8,0:8:10.78:0,11,46	0/0:6,0:6:5.86:0,6,84	0/0:12,0:9:11.90:0,12,111	0/0:6,0:6:5.65:0,6,64	0/0:25,0:24:39.81:0,40,701	0/0:13,0:11:0.62:0,1,2	0/0:11,0:11:1.16:0,1,31	0/0:10,0:10:23.71:0,24,269	0/0:15,0:14:6.21:0,6,69	0/0:21,0:21:54.17:0,54,1143	0/0:8,0:8:6.22:0,6,46	0/1:7,0:7:9.57:10,0,38	0/1:7,0:6:6.31:6,0,200	1/1:11,2:12:20.96:443,21,0	1/1:17,3:20:9.74:140,10,0	0/0:7,0:7:0:0,0,0	0/1:10,0:8:0:0,0,0	0/0:10,0:10:0.20:0,0,2	./.	0/0:19,0:18:2.83:0,3,11	0/1:21,0:19:22.72:23,0,334	1/1:17,3:19:11.77:427,12,0	0/1:12,0:12:40.50:40,0,142
chr10	49080392	.	GAAAC	G	202.58	PASS	AB=0.922;AC=11;AF=0.196;AN=56;BaseQRankSum=-0.199;DP=471;FS=7.839;HRun=0;HaplotypeScore=186.3040;InbreedingCoeff=0.0099;MQ=57.30;MQ0=15;MQRankSum=-0.632;QD=1.18;ReadPosRankSum=-0.054;VQSLOD=1.8540;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:33:88.15:0,88,2116	0/0:8,0:8:21.07:0,21,504	0/0:54,0:18:48.20:0,48,825	0/1:70,0:24:0.91:1,0,419	0/0:15,1:16:8.88:0,9,49	0/0:9,0:9:23.39:0,23,314	0/0:5,0:5:6.02:0,6,149	0/1:22,7:26:99:205,0,889	0/0:8,0:8:23.20:0,23,272	0/0:19,2:20:5.22:0,5,1196	1/1:8,1:7:0.63:1,1,0	0/0:8,0:13:10.50:0,11,189	0/1:7,2:9:7.79:8,0,302	0/0:11,2:13:14.66:0,15,340	0/0:25,0:25:72.23:0,72,1694	0/0:7,0:7:19.30:0,19,239	0/1:4,0:5:25.19:25,0,124	0/0:6,1:6:11.90:0,12,171	0/0:15,0:14:36.09:0,36,665	0/1:17,0:17:5.98:6,0,201	0/0:10,0:10:19.05:0,19,417	0/0:6,2:7:12.74:0,13,94	0/0:7,0:9:9.09:0,9,44	1/1:2,0:3:1.55:4,2,0	0/0:15,1:15:29.42:0,29,287	0/1:20,0:18:41.74:42,0,700	0/0:21,0:20:47.94:0,48,660	0/1:10,0:10:30.56:31,0,361
chr10	49080406	.	CAG	C	408.70	PASS	AB=0.923;AC=15;AF=0.313;AN=48;BaseQRankSum=1.333;DP=507;FS=10.487;HRun=0;HaplotypeScore=174.5583;InbreedingCoeff=0.1010;MQ=54.74;MQ0=15;MQRankSum=2.631;QD=1.54;ReadPosRankSum=-0.395;VQSLOD=1.9377;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:32,2:34:40.77:41,0,243	0/1:9,0:9:14.17:14,0,198	./.	0/1:60,0:23:0.03:0,0,0	1/1:23,0:23:0.09:1,0,0	0/0:10,0:10:0:0,0,0	0/0:6,0:6:0:0,0,0	0/0:40,0:38:30.98:0,31,203	./.	0/0:24,0:22:12.36:0,12,82	0/0:12,0:10:0:0,0,0	0/0:13,0:12:0:0,0,0	0/0:9,0:9:3.91:0,4,21	0/0:12,0:12:2.45:0,2,8	0/1:21,3:25:38.17:38,0,410	1/1:8,0:8:0.46:1,0,0	0/0:8,0:8:0.47:0,0,1	./.	1/1:14,1:13:3.01:33,3,0	0/1:18,3:21:7.36:130,0,7	0/1:12,3:15:6.21:117,0,6	0/1:12,0:11:0:0,0,0	0/0:10,0:9:0:0,0,0	./.	0/1:20,0:19:0.03:0,0,0	0/0:26,0:24:37.51:0,38,245	0/1:17,4:22:24:138,0,24	0/0:9,0:9:7.49:0,7,33
chr10	49080443	.	AGAGCGC	A	2564.88	PASS	AB=1.000;AC=35;AF=0.648;AN=54;BaseQRankSum=2.703;DP=506;FS=3.351;HRun=0;HaplotypeScore=140.8154;InbreedingCoeff=0.3056;MQ=51.47;MQ0=11;MQRankSum=-6.629;QD=6.97;ReadPosRankSum=-3.383;VQSLOD=1.6098;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:84.15:0,84,1648	0/0:15,0:14:36.03:0,36,769	0/1:25,0:15:13.99:14,0,510	0/0:23,0:13:27.59:0,28,454	1/1:27,0:27:8.34:124,8,0	0/0:2,12:14:0:0,0,0	1/1:13,0:13:9.03:152,9,0	0/1:24,0:24:20.75:193,0,21	1/1:5,0:5:6.02:101,6,0	1/1:18,0:17:27.08:382,27,0	1/1:17,0:15:6.02:74,6,0	1/1:10,0:9:3.01:50,3,0	1/1:9,0:9:4.69:169,5,0	0/1:15,0:15:0:0,0,0	0/0:25,0:25:54.18:0,54,1274	1/1:0,4:4:3.01:54,3,0	1/1:11,0:11:15.03:184,15,0	1/1:10,0:8:15.02:204,15,0	0/1:25,0:24:10.75:60,0,11	0/0:14,0:13:11.33:0,11,146	0/1:33,0:33:20.05:20,0,118	1/1:18,0:18:3.48:38,3,0	1/1:15,0:14:3.01:50,3,0	./.	1/1:21,0:19:12.03:178,12,0	1/1:32,0:30:36.95:605,37,0	0/1:31,0:30:9.40:9,0,197	0/1:5,0:5:15.07:73,0,15
chr10	49080445	.	AGCGC	A	3095.38	PASS	AB=0.992;AC=39;AF=0.750;AN=52;BaseQRankSum=4.733;DP=493;FS=0.538;HRun=0;HaplotypeScore=123.9901;InbreedingCoeff=0.3897;MQ=53.30;MQ0=11;MQRankSum=-6.041;QD=8.39;ReadPosRankSum=-2.018;VQSLOD=2.6980;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:83.83:0,84,1435	0/0:15,0:14:39:0,39,704	0/1:24,1:15:17.58:18,0,489	0/0:24,0:14:26.89:0,27,469	1/1:26,0:26:9.24:125,9,0	./.	1/1:13,0:13:9.03:152,9,0	1/1:24,0:24:12.22:214,12,0	1/1:5,0:5:6.02:101,6,0	1/1:17,0:16:32.70:436,33,0	1/1:16,0:14:6.49:75,6,0	1/1:9,0:8:3.01:50,3,0	1/1:8,1:9:14.52:181,15,0	0/1:13,0:13:0:0,0,0	0/0:24,0:24:55.87:0,56,1160	1/1:4,0:4:3.01:36,3,0	1/1:11,0:11:15.52:210,16,0	1/1:10,0:8:15.05:223,15,0	1/1:24,0:23:25.23:98,25,0	0/1:14,0:13:8.90:9,0,15	0/1:33,0:33:18.48:45,0,18	1/1:17,1:18:2.85:37,3,0	1/1:10,2:11:3.01:50,3,0	./.	1/1:21,1:20:15.05:254,15,0	1/1:33,0:31:59.81:756,60,0	0/1:28,0:27:56.16:111,0,56	1/1:3,0:3:2.39:79,2,0
chr10	49081678	.	TCTC	T	8954.25	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=13.136;DP=703;FS=5.223;HRun=0;HaplotypeScore=114.5176;InbreedingCoeff=0.9996;MQ=70.98;MQ0=0;MQRankSum=-6.577;QD=39.10;ReadPosRankSum=1.195;VQSLOD=5.6925;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,105,2363	0/0:16,0:16:42.14:0,42,936	0/0:15,0:13:38.59:0,39,712	0/0:26,0:23:40.69:0,41,1125	1/1:1,25:26:65.89:886,66,0	0/0:14,0:14:39.09:0,39,792	0/0:24,0:24:69.05:0,69,1412	1/1:6,30:36:90.26:1385,90,0	0/0:32,0:32:96.32:0,96,2109	1/1:0,23:23:57.18:918,57,0	1/1:0,15:15:44.81:620,45,0	0/0:31,0:31:84.27:0,84,1858	0/0:29,0:29:84.27:0,84,1841	1/1:3,34:37:87.25:1405,87,0	0/0:42,0:42:99:0,120,2547	0/0:28,0:28:78.25:0,78,1677	1/1:2,25:27:66.18:1067,66,0	1/1:1,14:15:30.10:499,30,0	0/0:16,0:15:33.01:0,33,614	0/0:23,0:23:66.23:0,66,1471	0/0:41,0:41:99:0,117,2430	0/0:15,0:15:45.15:0,45,986	0/0:19,0:19:48.12:0,48,921	0/0:30,0:30:90.30:0,90,1990	1/1:0,12:12:30.06:468,30,0	1/1:2,27:29:78.25:1257,78,0	0/0:37,0:37:99:0,111,2384	1/1:0,9:9:27.09:449,27,0
chr10	49082087	.	AT	A	5679.27	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=11.207;DP=553;FS=2.400;HRun=8;HaplotypeScore=107.4912;InbreedingCoeff=0.9826;MQ=66.95;MQ0=0;MQRankSum=1.370;QD=23.76;ReadPosRankSum=-1.054;VQSLOD=4.1984;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,102,1219	0/0:5,0:5:15.05:0,15,180	0/0:9,0:9:15.05:0,15,181	0/0:6,0:6:7.48:0,7,77	1/1:5,19:24:57.08:550,57,0	0/0:24,0:25:66.07:0,66,771	0/0:14,0:14:42.12:0,42,496	1/1:8,27:35:81.06:755,81,0	0/0:10,0:10:27.08:0,27,326	1/1:4,19:23:54.05:512,54,0	1/1:3,20:23:56.99:531,57,0	0/0:24,0:24:72.09:0,72,848	0/0:18,0:18:48.13:0,48,566	1/1:0,11:11:27.04:261,27,0	0/0:17,0:17:45.14:0,45,543	0/0:21,0:21:57.17:0,57,689	1/1:1,25:26:72.12:695,72,0	1/1:0,27:27:69.11:666,69,0	0/0:17,0:17:36.10:0,36,424	0/0:33,0:33:84.23:0,84,991	0/0:12,0:12:33.10:0,33,397	0/0:16,0:16:45.14:0,45,543	0/0:16,0:16:48.14:0,48,570	0/0:13,0:12:39.12:0,39,471	1/1:2,29:31:81.13:782,81,0	1/1:0,25:25:75.12:724,75,0	0/0:22,0:22:63.18:0,63,749	1/1:3,11:14:21.03:203,21,0
chr10	49082624	.	A	AT	3020.52	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-13.778;DP=608;FS=0.000;HRun=8;HaplotypeScore=125.6318;InbreedingCoeff=0.9855;MQ=75.13;MQ0=0;MQRankSum=-1.252;QD=27.71;ReadPosRankSum=2.379;VQSLOD=2.1189;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:69.02:0,69,632	0/0:5,0:5:15.01:0,15,137	0/0:19,0:19:47.96:0,48,424	0/0:4,0:4:12:0,12,106	0/0:28,0:28:75:0,75,681	0/0:22,0:22:60.03:0,60,549	0/0:17,0:18:41.05:0,41,363	0/0:42,0:42:99:0,102,921	0/0:11,0:11:33.01:0,33,298	0/0:28,0:28:75:0,75,686	0/0:24,0:24:60:0,60,548	0/0:23,0:23:59.99:0,60,543	0/0:27,0:27:71.95:0,72,648	0/0:17,0:17:51.03:0,51,466	0/0:18,0:18:51.03:0,51,467	0/0:17,0:17:51.03:0,51,467	0/0:21,0:21:53.96:0,54,483	0/0:16,0:16:47.98:0,48,430	1/1:7,18:25:54.07:604,54,0	1/1:2,28:31:80.94:882,81,0	1/1:0,14:14:42.12:485,42,0	0/0:20,0:20:48.01:0,48,438	0/0:22,0:22:51:0,51,467	0/0:10,0:10:20.99:0,21,192	0/0:32,0:32:96.05:0,96,878	0/0:37,0:37:98.99:0,99,902	1/1:3,36:39:99:1211,105,0	0/0:10,0:10:27.01:0,27,247
chr10	49082842	.	A	AT	15440.38	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=6.665;DP=676;FS=4.192;HRun=1;HaplotypeScore=81.1269;InbreedingCoeff=0.9994;MQ=82.97;MQ0=0;MQRankSum=-2.021;QD=40.63;ReadPosRankSum=2.283;VQSLOD=5.4946;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:81.26:0,81,1049	0/0:7,0:7:21.07:0,21,272	0/0:24,0:24:69.13:0,69,826	0/0:16,0:16:42.13:0,42,538	1/1:2,22:24:63.08:869,63,0	0/0:21,0:21:63.20:0,63,817	0/0:23,0:23:66.21:0,66,857	1/1:0,25:25:75.22:1064,75,0	0/0:22,0:22:66.21:0,66,857	1/1:1,30:31:90.28:1326,90,0	1/1:0,19:19:54.18:809,54,0	1/1:1,24:25:66.22:989,66,0	1/1:0,22:22:60.20:899,60,0	1/1:0,27:27:75.25:1124,75,0	0/0:25,0:25:75.24:0,75,973	0/0:25,0:25:69.19:0,69,866	1/1:0,29:30:81.27:1201,81,0	1/1:1,21:22:60.20:892,60,0	0/0:25,0:25:72.21:0,72,918	0/0:26,0:26:72.22:0,72,918	0/0:31,0:31:93.29:0,93,1195	1/1:1,27:28:75.25:1122,75,0	1/1:0,27:27:72.04:1079,72,0	1/1:1,29:30:78.26:1169,78,0	1/1:0,35:35:93.31:1387,93,0	1/1:0,22:22:66.21:970,66,0	0/0:24,0:24:72.23:0,72,932	1/1:0,13:13:36.12:540,36,0
chr10	49083301	.	C	CT	13755.97	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=6.112;DP=774;FS=3.444;HRun=3;HaplotypeScore=134.8745;InbreedingCoeff=0.9856;MQ=81.85;MQ0=0;MQRankSum=-3.670;QD=37.69;ReadPosRankSum=1.251;VQSLOD=3.9135;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:56:99:0,159,1969	0/0:14,0:14:42.13:0,42,516	0/0:27,0:27:69.17:0,69,828	0/0:25,0:25:59.66:0,60,677	1/1:3,27:30:81.18:1100,81,0	0/0:27,0:27:78.25:0,78,966	0/0:30,0:30:90.26:0,90,1090	1/1:2,33:35:99:1407,99,0	0/0:32,0:32:96.30:0,96,1189	1/1:3,22:25:69.15:947,69,0	1/1:0,21:21:60.20:855,60,0	1/1:2,23:25:69.20:956,69,0	1/1:3,26:29:75.25:1079,75,0	1/1:2,25:27:75.21:1037,75,0	0/0:48,0:47:99:0,132,1635	0/0:32,0:32:93.28:0,93,1138	1/1:1,17:18:45.11:624,45,0	1/1:0,17:17:45.15:648,45,0	0/0:14,0:14:36.11:0,36,446	0/0:26,0:26:75.23:0,75,924	0/0:39,0:39:99:0,105,1266	1/1:1,25:26:75.21:1040,75,0	1/1:2,22:24:63.04:814,63,0	1/1:1,15:16:36.12:508,36,0	1/1:3,31:34:96.24:1334,96,0	1/1:3,31:34:93.30:1320,93,0	0/0:39,0:39:99:0,108,1295	1/1:0,4:4:6.02:86,6,0
chr10	49083377	.	G	GTA	5475.78	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-14.232;DP=671;FS=4.968;HRun=0;HaplotypeScore=169.4530;InbreedingCoeff=0.9959;MQ=66.01;MQ0=0;MQRankSum=2.982;QD=45.63;ReadPosRankSum=1.868;VQSLOD=4.9583;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:56:99:0,160,2220	0/0:9,0:9:27.09:0,27,377	0/0:14,0:14:38.89:0,39,491	0/0:16,0:16:35.14:0,35,451	0/0:27,0:27:42.13:0,42,563	0/0:29,0:29:84.26:0,84,1157	0/0:22,0:22:60.20:0,60,837	0/0:20,0:20:39.09:0,39,523	0/0:42,0:42:99:0,117,1620	0/0:21,0:21:51.17:0,51,714	0/0:20,0:20:57.07:0,57,752	0/0:19,0:19:51.15:0,51,693	0/0:21,0:21:54.16:0,54,720	0/0:19,0:19:45.15:0,45,620	0/0:31,0:30:78.26:0,78,1092	0/0:33,0:33:87.29:0,87,1217	0/0:18,0:18:24.07:0,24,319	0/0:11,0:11:24.08:0,24,332	1/1:2,20:22:60.21:1070,60,0	1/1:0,30:30:90.31:1618,90,0	1/1:2,42:44:99:1870,105,0	0/0:16,0:16:29.88:0,30,400	0/0:25,0:25:63.21:0,63,874	0/0:22,0:22:18.02:0,18,222	0/0:24,0:24:66.20:0,66,904	0/0:25,0:25:60.20:0,60,823	1/1:3,21:24:51.17:918,51,0	0/0:11,0:11:30.06:0,30,398
chr10	49083485	.	ACT	A	4222.47	PASS	AB=0.979;AC=45;AF=0.833;AN=54;BaseQRankSum=1.989;DP=480;FS=27.300;HRun=0;HaplotypeScore=113.9235;InbreedingCoeff=0.7577;MQ=68.39;MQ0=8;MQRankSum=-7.864;QD=11.32;ReadPosRankSum=5.003;VQSLOD=2.9145;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:54.18:0,54,896	0/0:10,0:10:24:0,24,363	0/1:45,0:21:6.27:6,0,369	0/0:52,0:27:18.29:0,18,318	1/1:8,0:8:2.37:8,2,0	1/1:3,15:18:45.14:566,45,0	1/1:6,13:19:36.12:453,36,0	1/1:2,0:13:27:100,27,0	1/1:3,12:15:33.11:415,33,0	1/1:15,0:15:22.46:81,22,0	1/1:12,0:12:14.91:56,15,0	1/1:20,0:20:14.03:49,14,0	1/1:20,0:20:12.01:44,12,0	1/1:10,0:10:16.97:60,17,0	0/0:14,0:14:27.09:0,27,449	1/1:7,14:21:42.13:528,42,0	1/1:13,0:13:12.48:45,12,0	1/1:12,0:12:14.72:52,15,0	1/1:2,10:12:30.10:378,30,0	1/1:4,13:17:36.12:453,36,0	1/1:6,15:21:30.06:378,30,0	1/1:17,0:17:16.85:59,17,0	1/1:12,0:12:2.22:7,2,0	1/1:9,0:9:4.99:18,5,0	1/1:12,0:12:9.98:36,10,0	1/1:14,0:14:24.95:90,25,0	1/1:8,9:17:27.09:339,27,0	./.
chr10	49083495	.	T	TA	3771.71	PASS	AC=28;AF=0.519;AN=54;BaseQRankSum=-1.835;DP=407;FS=11.665;HRun=0;HaplotypeScore=91.3808;InbreedingCoeff=0.9333;MQ=62.00;MQ0=17;MQRankSum=-3.499;QD=27.13;ReadPosRankSum=-0.857;VQSLOD=2.8143;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:54.18:0,54,756	0/0:8,0:8:24.08:0,24,330	0/0:54,0:17:34.88:0,35,498	0/0:57,0:24:39.49:0,39,490	1/1:0,6:6:3.01:47,3,0	0/0:15,0:15:39.83:0,40,166	0/0:13,0:13:32.37:0,32,141	1/1:11,0:11:33.09:471,33,0	0/0:12,0:12:29.16:0,29,122	1/1:0,10:10:27.09:430,27,0	1/1:1,9:10:18.05:263,18,0	1/1:0,14:14:18.06:278,18,0	1/1:0,15:15:18.06:270,18,0	1/1:0,8:8:21.07:329,21,0	0/0:16,0:15:32.91:0,33,446	0/0:15,0:14:40.18:0,40,179	1/1:0,8:8:15.05:238,15,0	1/1:0,8:8:18.06:284,18,0	0/0:10,0:10:26.97:0,27,117	0/0:14,0:14:32.16:0,32,138	0/0:18,0:18:32.75:0,33,195	1/1:0,12:12:21.07:328,21,0	1/1:2,5:7:6.01:71,6,0	1/1:0,7:7:6.49:97,6,0	1/1:0,11:11:12.04:190,12,0	1/1:0,12:12:30.10:477,30,0	0/0:12,0:12:23.77:0,24,98	./.
chr10	49083675	.	A	AC	8879.61	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=14.818;DP=570;FS=14.317;HRun=6;HaplotypeScore=117.4286;InbreedingCoeff=0.9915;MQ=84.91;MQ0=0;MQRankSum=-6.224;QD=30.20;ReadPosRankSum=1.019;VQSLOD=3.1963;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:75.17:0,75,765	0/0:3,0:3:9.02:0,9,91	0/0:26,0:26:54.15:0,54,624	0/0:21,0:21:47.49:0,47,433	1/1:0,16:16:39.12:490,39,0	0/0:14,0:14:33.08:0,33,336	0/0:33,0:33:84.12:0,84,834	1/1:4,15:19:48.09:561,48,0	0/0:20,0:20:57.13:0,57,580	1/1:4,23:27:69.22:868,69,0	1/1:2,14:16:36.11:450,36,0	1/1:2,26:28:69.18:844,69,0	1/1:4,22:26:51.16:641,51,0	1/1:2,19:21:54.17:678,54,0	0/0:22,0:22:57.12:0,57,581	0/0:15,0:15:39.07:0,39,390	1/1:2,18:20:48.15:604,48,0	1/1:0,11:11:30.10:375,30,0	0/0:15,0:15:45.10:0,45,458	0/0:32,0:32:78.15:0,78,784	0/0:25,0:25:57.09:0,57,566	1/1:5,15:20:54.09:657,54,0	1/1:0,18:18:39.12:490,39,0	1/1:0,13:13:33.11:415,33,0	1/1:6,14:20:36.12:453,36,0	1/1:3,27:30:84.27:1053,84,0	0/0:17,0:17:42.09:0,42,427	1/1:1,8:8:24.08:302,24,0
chr10	49084093	.	G	GA	10015.52	PASS	AB=0.625;AC=37;AF=0.661;AN=56;BaseQRankSum=7.361;DP=636;FS=5.919;HRun=10;HaplotypeScore=86.9084;InbreedingCoeff=0.8815;MQ=68.35;MQ0=0;MQRankSum=-0.312;QD=22.76;ReadPosRankSum=0.062;VQSLOD=5.2855;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:49:99:0,131,1058	0/0:12,1:13:6.97:0,7,264	0/0:7,0:6:8.95:0,9,73	0/0:14,0:13:7.46:0,7,48	1/1:5,25:31:47.31:665,47,0	0/0:29,0:29:68.90:0,69,564	0/0:24,0:24:59.90:0,60,490	1/1:5,20:25:54.14:575,54,0	0/0:11,0:11:26.95:0,27,222	1/1:6,15:21:45.11:480,45,0	1/1:4,12:16:17.42:377,17,0	1/1:3,25:28:38.51:615,39,0	1/1:5,19:25:35.33:558,35,0	1/1:4,14:18:17.46:391,17,0	0/0:27,0:27:71.91:0,72,591	0/0:22,0:22:56.91:0,57,466	1/1:0,29:29:78.20:832,78,0	1/1:7,20:27:29.33:501,29,0	1/1:5,15:20:45.09:470,45,0	1/1:7,28:36:34.65:726,35,0	1/1:2,15:19:44.78:444,45,0	1/1:5,20:26:53.26:590,53,0	1/1:2,28:30:66.16:703,66,0	1/1:1,20:21:51.13:543,51,0	1/1:2,10:12:30.08:320,30,0	1/1:3,18:21:54.10:566,54,0	1/1:5,19:25:47.95:494,48,0	0/1:3,6:10:29.07:166,0,29
chr10	49085217	.	C	CCTAG	25781.33	PASS	AB=0.574;AC=29;AF=0.518;AN=56;BaseQRankSum=-14.722;DP=807;FS=1.204;HRun=0;HaplotypeScore=164.4712;InbreedingCoeff=0.9273;MQ=78.31;MQ0=2;MQRankSum=-4.084;QD=60.52;ReadPosRankSum=3.317;VQSLOD=6.3831;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,129,2281	0/0:13,0:13:33.11:0,33,593	0/0:23,0:23:63.20:0,63,1032	0/0:17,0:17:48.14:0,48,825	1/1:6,24:31:69.24:1791,69,0	0/0:29,0:29:81.26:0,81,1400	0/0:32,0:32:88.54:0,89,1540	1/1:15,20:35:78.27:2001,78,0	0/0:35,0:35:95.77:0,96,1638	1/1:6,29:35:87.30:2218,87,0	1/1:7,17:24:45.15:1144,45,0	1/1:3,21:24:60.21:1518,60,0	1/1:3,21:25:63.22:1632,63,0	1/1:8,17:26:45.15:1163,45,0	0/0:32,0:32:93.31:0,93,1639	0/0:43,0:43:99:0,108,1824	1/1:5,32:37:93.32:2415,93,0	1/1:3,20:23:57.20:1480,57,0	0/0:22,0:22:49.87:0,50,832	0/0:25,0:25:69.18:0,69,1141	0/0:27,0:27:63.22:0,63,1098	1/1:2,35:38:93.32:2403,93,0	1/1:2,25:26:72.25:1867,72,0	0/1:7,18:27:52.74:1192,0,53	1/1:3,28:31:81.28:2103,81,0	1/1:4,31:36:93.32:2386,93,0	0/0:34,0:33:93.32:0,93,1656	1/1:0,6:6:18.06:468,18,0
chr10	49086223	.	CCGT	C	1941.19	PASS	AB=0.970;AC=21;AF=0.375;AN=56;BaseQRankSum=9.955;DP=685;FS=46.801;HRun=0;HaplotypeScore=225.7415;InbreedingCoeff=-0.3044;MQ=80.11;MQ0=0;MQRankSum=4.283;QD=4.10;ReadPosRankSum=4.944;VQSLOD=1.4525;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:87.30:0,87,2105	0/0:13,0:13:39.13:0,39,961	0/0:26,0:26:78.27:0,78,1763	0/0:14,0:14:42.11:0,42,941	0/1:44,0:44:56.21:56,0,129	0/0:24,0:24:66.22:0,66,918	0/0:19,0:19:54.18:0,54,753	0/1:31,1:32:99:229,0,110	0/0:20,0:20:54.17:0,54,741	0/1:28,0:28:45.18:218,0,45	0/1:27,1:28:39.17:148,0,39	0/1:20,0:20:15.11:15,0,80	0/1:20,1:21:37.41:37,0,100	0/1:22,0:22:31.27:31,0,77	0/0:33,0:33:99:0,99,2400	0/0:33,0:33:93.31:0,93,1284	0/1:23,2:25:5.01:181,0,5	1/1:23,0:23:15.41:168,15,0	0/1:19,0:19:22.32:22,0,89	0/1:34,1:35:78.11:156,0,78	0/1:24,3:27:19.74:96,0,20	0/1:32,0:32:84.74:85,0,145	0/1:16,0:16:38.48:38,0,87	0/1:17,0:17:42.37:42,0,69	0/1:28,0:28:46.89:98,0,47	0/1:23,2:25:39.56:264,0,40	0/1:26,4:28:99:214,0,114	1/1:2,0:2:3.37:9,3,0
chr10	49087022	.	C	CG	4946.08	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=10.723;DP=549;FS=0.796;HRun=2;HaplotypeScore=107.0717;InbreedingCoeff=0.9982;MQ=75.17;MQ0=0;MQRankSum=-8.640;QD=38.05;ReadPosRankSum=1.576;VQSLOD=4.7689;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:66.19:0,66,803	0/0:11,0:11:33.10:0,33,409	0/0:17,0:15:36.57:0,37,420	0/0:14,0:13:33.07:0,33,381	0/0:30,0:30:90.27:0,90,1101	1/1:2,17:19:51.17:730,51,0	1/1:4,16:20:51.13:707,51,0	0/0:35,0:35:99:0,99,1217	1/1:1,10:11:30.10:431,30,0	0/0:31,0:30:81.25:0,81,1004	0/0:27,0:27:78.24:0,78,964	0/0:21,0:21:60.19:0,60,742	0/0:20,0:20:54.14:0,54,643	0/0:11,0:11:33.10:0,33,407	0/0:25,0:25:66.21:0,66,818	1/1:1,12:13:39.09:537,39,0	0/0:28,0:28:69.22:0,69,859	0/0:16,0:16:48.12:0,48,577	1/1:3,15:18:48.16:687,48,0	1/1:3,22:25:72.23:1012,72,0	1/1:3,6:9:18.06:258,18,0	0/0:19,0:19:54.17:0,54,668	0/0:15,0:15:39.09:0,39,457	0/0:13,0:13:33.10:0,33,409	0/0:24,0:24:63.19:0,63,771	0/0:29,0:29:84.26:0,84,1041	1/1:2,12:15:42.13:585,42,0	0/0:9,0:9:27.08:0,27,333
chr10	49087040	.	GTA	G	978.09	PASS	AB=0.992;AC=21;AF=0.375;AN=56;BaseQRankSum=9.385;DP=560;FS=2.442;HRun=0;HaplotypeScore=138.2803;InbreedingCoeff=-0.1804;MQ=65.80;MQ0=0;MQRankSum=-0.612;QD=2.68;ReadPosRankSum=5.644;VQSLOD=2.3361;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:78.62:0,79,1223	0/0:9,0:9:27.02:0,27,426	0/1:14,1:9:30.27:30,0,111	0/1:14,0:10:1.86:2,0,111	0/1:24,0:24:72.15:100,0,72	0/1:20,0:20:39.02:86,0,39	0/1:20,0:20:46.48:65,0,46	0/0:31,1:33:6.46:0,6,190	1/1:11,0:11:24.32:113,24,0	0/1:29,0:28:70.45:70,0,128	0/1:28,0:28:47.77:57,0,48	0/0:21,0:21:53.83:0,54,420	0/0:21,0:21:56.78:0,57,459	0/1:15,0:15:28.02:64,0,28	0/0:21,0:21:63.22:0,63,1223	0/1:13,0:13:14.84:59,0,15	0/1:31,0:31:53.31:60,0,53	1/1:18,0:18:5.39:52,5,0	0/1:16,1:17:76.96:77,0,96	0/1:30,0:30:64:110,0,64	0/0:11,0:11:2.48:0,2,106	0/0:20,0:20:56.82:0,57,457	0/0:24,0:24:47.45:0,47,407	0/0:8,0:8:23.97:0,24,200	1/1:20,1:21:8.60:116,9,0	0/1:25,0:25:24.34:24,0,110	0/1:17,0:17:46.06:46,0,92	0/1:17,0:17:14.52:15,0,42
chr10	49087041	.	TAA	T	7491.48	PASS	AB=0.971;AC=38;AF=0.679;AN=56;BaseQRankSum=2.418;DP=560;FS=0.000;HRun=13;HaplotypeScore=117.0521;InbreedingCoeff=0.8412;MQ=65.79;MQ0=0;MQRankSum=0.970;QD=18.50;ReadPosRankSum=0.447;VQSLOD=3.8106;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:27:63.14:0,63,831	0/0:10,0:10:21.07:0,21,303	0/1:15,0:9:13.40:13,0,87	0/1:14,0:10:3.64:4,0,142	1/1:4,19:24:50.98:543,51,0	1/1:4,15:19:42.05:407,42,0	1/1:5,15:20:35.98:349,36,0	1/1:12,21:33:59.92:567,60,0	1/1:0,11:11:27.01:262,27,0	1/1:6,21:26:63.07:611,63,0	1/1:3,24:28:65.78:623,66,0	0/0:3,0:21:39.93:0,40,137	0/0:4,0:21:40.03:0,40,151	1/1:2,12:15:29.97:291,30,0	0/0:21,0:23:69.21:0,69,951	1/1:2,11:13:27.03:262,27,0	1/1:3,25:31:59.15:579,59,0	1/1:0,17:18:47.80:448,48,0	1/1:6,10:17:26.95:310,27,0	1/1:6,24:30:62.91:605,63,0	1/1:4,5:10:5.24:57,5,0	0/0:5,1:21:37.93:0,38,145	0/0:5,0:24:12.51:0,13,137	0/0:0,0:8:19.96:0,20,69	1/1:2,19:21:54.08:523,54,0	1/1:4,19:24:47.98:515,48,0	1/1:6,11:17:29.96:291,30,0	1/1:3,14:17:23.97:233,24,0
chr10	49087224	.	AGC	A	7584.63	PASS	AB=0.581;AC=43;AF=0.768;AN=56;BaseQRankSum=16.260;DP=493;FS=3.294;HRun=0;HaplotypeScore=253.2054;InbreedingCoeff=0.6509;MQ=90.22;MQ0=0;MQRankSum=-15.159;QD=20.50;ReadPosRankSum=6.592;VQSLOD=4.5427;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:93.30:0,93,1839	0/0:7,0:6:21.07:0,21,427	0/0:29,0:29:81.03:0,81,1556	0/0:26,0:26:78.26:0,78,1522	1/1:1,15:15:44.35:334,44,0	1/1:1,10:11:30:262,30,0	1/1:4,13:17:43.24:366,43,0	1/1:7,17:24:7.97:430,8,0	1/1:0,11:11:33:288,33,0	0/1:5,12:17:13.59:281,0,14	1/1:0,12:12:32.93:276,33,0	1/1:3,21:24:68.91:582,69,0	1/1:5,20:25:23.32:482,23,0	1/1:6,17:23:58.46:483,58,0	0/0:30,0:30:90.31:0,90,1815	1/1:4,8:12:7.94:199,8,0	1/1:4,15:19:43.67:358,44,0	1/1:2,5:7:18.48:165,18,0	0/1:4,8:12:22.79:191,0,23	1/1:2,17:19:50.29:408,50,0	1/1:6,8:14:26.57:193,27,0	1/1:2,15:17:50.78:423,51,0	1/1:2,16:18:47.73:401,48,0	1/1:4,12:16:35.90:291,36,0	1/1:3,14:17:41.59:331,42,0	0/1:4,16:20:26.53:372,0,27	1/1:2,15:17:50.92:445,51,0	1/1:1,1:2:3:26,3,0
chr10	49087227	.	ATAGGTGACCT	A	22836	PASS	AB=0.565;AC=42;AF=0.750;AN=56;BaseQRankSum=16.352;DP=479;FS=1.226;HRun=0;HaplotypeScore=273.2162;InbreedingCoeff=0.6104;MQ=90.13;MQ0=0;MQRankSum=-15.481;QD=63.97;ReadPosRankSum=6.686;VQSLOD=3.8110;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:93.32:0,93,4838	0/0:7,0:6:21.07:0,21,1154	0/0:28,0:28:67.80:0,68,3409	0/0:27,0:27:81.21:0,81,3635	1/1:1,15:15:42.14:978,42,0	1/1:1,10:11:30.10:821,30,0	1/1:2,13:15:39.13:1065,39,0	0/1:3,17:20:1.92:1268,0,2	1/1:0,11:11:33.11:903,33,0	0/1:5,12:17:13.42:949,0,13	1/1:0,12:12:36.05:872,36,0	1/1:3,21:24:60.21:1637,60,0	1/1:5,20:25:24.34:1584,24,0	1/1:6,17:23:54.19:1459,54,0	0/0:29,0:29:87.28:0,87,4463	1/1:4,8:12:6.64:597,7,0	1/1:3,15:18:41.35:1068,41,0	1/1:1,5:6:15.05:421,15,0	0/1:3,8:11:26.97:637,0,27	1/1:1,17:18:51.15:1283,51,0	1/1:6,8:14:24.50:462,24,0	1/1:2,15:17:45.15:1204,45,0	1/1:1,16:17:51.09:1237,51,0	1/1:2,12:14:30.06:750,30,0	1/1:3,14:17:48.15:1083,48,0	0/1:4,16:20:18.75:1267,0,19	1/1:2,15:17:45.15:1208,45,0	1/1:1,1:2:3.01:82,3,0
chr10	49087234	.	ACCT	A	9280.36	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=15.584;DP=428;FS=1.857;HRun=0;HaplotypeScore=240.2504;InbreedingCoeff=0.9537;MQ=87.74;MQ0=0;MQRankSum=-15.205;QD=29.74;ReadPosRankSum=4.290;VQSLOD=5.1370;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:96.33:0,96,2270	0/0:11,0:10:33.11:0,33,780	0/0:24,0:24:60.51:0,61,1410	0/0:23,0:23:66.23:0,66,1466	1/1:15,3:17:32.11:331,32,0	1/1:10,0:10:30.08:332,30,0	1/1:13,0:13:39.11:429,39,0	1/1:17,2:19:54.13:592,54,0	1/1:12,0:12:36.08:389,36,0	1/1:12,0:12:36.10:408,36,0	1/1:12,0:12:33.02:347,33,0	1/1:22,0:22:63.16:685,63,0	1/1:20,0:20:60.15:649,60,0	1/1:20,0:20:54.11:580,54,0	0/0:26,0:26:78.27:0,78,1845	1/1:9,0:9:24.05:255,24,0	1/1:15,0:15:39.10:426,39,0	1/1:5,0:5:15.05:177,15,0	1/1:8,0:8:24.07:279,24,0	1/1:17,0:17:46.71:480,47,0	1/1:9,0:9:17.98:178,18,0	1/1:15,0:15:44.15:472,44,0	1/1:16,0:17:50.42:507,50,0	1/1:12,0:12:30.04:310,30,0	1/1:14,0:14:33.09:364,33,0	1/1:17,0:17:51.14:572,51,0	1/1:15,0:15:42.12:486,42,0	1/1:1,0:1:3.01:33,3,0
chr10	49087463	.	GC	G	7745.54	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-6.144;DP=764;FS=4.780;HRun=1;HaplotypeScore=147.7071;InbreedingCoeff=0.9900;MQ=82.77;MQ0=0;MQRankSum=-2.714;QD=30.86;ReadPosRankSum=0.935;VQSLOD=4.4892;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,123,1940	0/0:12,0:12:36.08:0,36,526	0/0:24,0:24:66.22:0,66,1001	0/0:23,0:23:34.32:0,34,749	0/0:20,0:19:40.77:0,41,207	1/1:1,15:16:39.75:457,40,0	1/1:3,31:34:96.10:1109,96,0	0/0:26,0:26:70.46:0,70,453	1/1:3,28:31:79.89:982,80,0	0/0:31,0:31:78.67:0,79,516	0/0:23,0:23:54.49:0,54,331	0/0:31,0:31:80.76:0,81,472	0/0:43,0:43:99:0,110,611	0/0:28,0:28:72.22:0,72,459	0/0:45,0:45:99:0,135,2129	1/1:0,46:46:99:1380,120,0	0/0:18,0:18:43.73:0,44,245	0/0:16,0:16:39.95:0,40,194	1/1:6,14:20:51.83:552,52,0	1/1:1,26:27:74.70:855,75,0	1/1:5,43:48:99:1547,130,0	0/0:24,0:24:38.79:0,39,251	0/0:27,0:27:56.88:0,57,327	0/0:23,0:23:65.85:0,66,367	0/0:28,0:28:68.36:0,68,368	0/0:26,0:26:62.62:0,63,439	1/1:2,27:29:76.05:864,76,0	0/0:3,0:3:8.90:0,9,104
chr10	49087466	.	TA	T	19864.03	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=11.136;DP=770;FS=1.527;HRun=4;HaplotypeScore=107.0203;InbreedingCoeff=0.9602;MQ=83.24;MQ0=0;MQRankSum=-7.399;QD=31.99;ReadPosRankSum=2.656;VQSLOD=4.7379;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,123,1705	0/0:10,0:10:30.10:0,30,415	0/0:28,0:27:78.24:0,78,1033	0/0:23,0:23:33.13:0,33,541	1/1:2,19:20:57.09:664,57,0	1/1:17,0:17:45.12:518,45,0	1/1:34,0:34:96.25:1100,96,0	1/1:1,24:25:72.21:853,72,0	1/1:31,0:31:87.24:998,87,0	1/1:4,29:33:99:1146,99,0	1/1:0,23:23:63.19:756,63,0	1/1:1,31:32:87.20:1043,87,0	1/1:2,42:44:99:1439,120,0	1/1:2,25:27:72.22:864,72,0	0/0:46,0:46:99:0,138,1915	1/1:47,0:47:99:1417,123,0	1/1:1,17:18:45.14:540,45,0	1/1:1,16:17:42.13:504,42,0	1/1:21,1:22:47.65:549,48,0	1/1:27,1:28:75.99:892,76,0	1/1:47,0:47:99:1544,135,0	1/1:1,22:23:60.10:700,60,0	1/1:1,26:27:72.22:863,72,0	1/1:0,22:22:66.20:792,66,0	1/1:0,28:28:78.24:936,78,0	1/1:1,25:26:72.22:863,72,0	1/1:27,1:28:75.08:849,75,0	1/1:0,1:1:3.01:36,3,0
chr10	49087563	.	TGAG	T	11452.25	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=8.644;DP=780;FS=11.822;HRun=0;HaplotypeScore=127.1324;InbreedingCoeff=0.9994;MQ=82.81;MQ0=0;MQRankSum=-3.777;QD=44.91;ReadPosRankSum=2.588;VQSLOD=6.1428;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:78.27:0,78,1796	0/0:22,0:22:66.23:0,66,1522	0/0:26,0:26:78.27:0,78,1766	0/0:24,0:24:69.21:0,69,1429	1/1:1,24:25:66.22:1084,66,0	0/0:24,0:24:69.13:0,69,1546	0/0:25,0:25:75.26:0,75,1730	1/1:3,29:32:81.28:1378,81,0	0/0:28,0:28:81.28:0,81,1844	1/1:1,32:33:93.30:1558,93,0	1/1:0,31:31:87.21:1421,87,0	0/0:35,0:35:99:0,99,2283	0/0:37,0:37:99:0,108,2491	1/1:0,32:32:87.30:1484,87,0	0/0:39,0:39:99:0,117,2639	0/0:34,0:34:99:0,99,2282	1/1:1,20:21:51.17:870,51,0	1/1:2,14:16:38.81:664,39,0	0/0:19,0:19:45.15:0,45,1010	0/0:34,0:34:99:0,102,2261	0/0:31,0:31:90.31:0,90,2013	0/0:34,0:34:99:0,102,2308	0/0:30,0:30:84.29:0,84,1927	0/0:26,0:26:78.27:0,78,1798	1/1:2,25:27:69.24:1177,69,0	1/1:0,29:29:87.28:1458,87,0	0/0:30,0:29:87.30:0,87,2005	1/1:0,9:9:21.07:358,21,0
chr10	49088147	.	TGAGAG	T	16834.85	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=6.207;DP=733;FS=8.491;HRun=0;HaplotypeScore=160.0653;InbreedingCoeff=0.9983;MQ=85.16;MQ0=1;MQRankSum=-10.355;QD=45.13;ReadPosRankSum=4.086;VQSLOD=4.3614;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,123,3657	0/0:9,0:9:21.06:0,21,571	0/0:35,0:35:85.49:0,85,2347	0/0:35,0:35:85.28:0,85,2352	1/1:3,29:32:68.81:1395,69,0	0/0:17,0:17:45.15:0,45,1361	0/0:24,0:24:60.21:0,60,1819	1/1:3,17:20:51.16:957,51,0	0/0:23,0:23:69.24:0,69,2025	1/1:1,13:14:39.13:782,39,0	1/1:7,18:25:54.19:1095,54,0	1/1:5,29:34:75.26:1503,75,0	1/1:3,28:31:66.23:1340,66,0	1/1:4,20:24:51.17:1035,51,0	0/0:30,0:30:87.30:0,87,2619	0/0:33,0:33:96.33:0,96,2840	1/1:4,40:44:93.79:1889,94,0	1/1:4,24:28:63.17:1238,63,0	0/0:21,0:21:63.22:0,63,1882	0/0:26,0:26:69.24:0,69,2058	0/0:30,0:29:78.27:0,78,2363	1/1:0,25:26:63.22:1236,63,0	1/1:3,18:21:48.12:953,48,0	1/1:4,24:28:57.20:1157,57,0	1/1:2,13:15:39.13:792,39,0	1/1:5,19:24:54.66:1097,55,0	0/0:32,0:32:90.31:0,90,2696	1/1:1,6:7:18.06:365,18,0
chr10	49089600	.	T	TGTCTGG	27831.68	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=8.049;DP=670;FS=5.015;HRun=0;HaplotypeScore=155.3587;InbreedingCoeff=0.9792;MQ=69.65;MQ0=0;MQRankSum=-19.026;QD=78.62;ReadPosRankSum=-0.239;VQSLOD=5.8625;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:90.31:0,90,2098	0/0:11,0:11:33.11:0,33,769	0/0:25,0:25:69.72:0,70,1390	0/0:18,0:18:39.46:0,39,733	1/1:5,19:25:54.19:1900,54,0	0/0:18,0:18:54.19:0,54,1259	0/0:20,0:20:54.19:0,54,1233	1/1:15,15:33:81.25:2519,81,0	0/0:19,0:19:51.16:0,51,1123	1/1:10,22:33:96.30:3031,96,0	1/1:2,6:9:15.05:519,15,0	1/1:9,26:38:93.24:2923,93,0	1/1:3,17:23:54.19:1888,54,0	1/1:7,30:38:99:3316,102,0	0/0:32,0:32:90.29:0,90,2043	0/0:27,0:27:78.27:0,78,1793	1/1:4,10:15:33.11:1133,33,0	1/1:4,11:17:45.11:1491,45,0	0/0:24,0:24:57.81:0,58,1351	0/0:26,0:26:69.24:0,69,1593	0/0:37,0:37:99:0,105,2342	1/1:4,25:29:72.25:2535,72,0	1/1:7,22:29:54.06:1794,54,0	1/1:3,8:11:12.04:357,12,0	1/1:3,16:20:51.18:1796,51,0	1/1:7,21:28:75.26:2419,75,0	0/0:25,0:25:72.23:0,72,1557	1/1:1,4:5:6.02:211,6,0
chr10	49092084	.	C	CACAT	16696.22	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=16.367;DP=547;FS=9.407;HRun=0;HaplotypeScore=241.2911;InbreedingCoeff=0.9633;MQ=58.10;MQ0=0;MQRankSum=-16.339;QD=47.03;ReadPosRankSum=0.408;VQSLOD=4.0360;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:93.25:0,93,1574	0/0:9,0:9:24.08:0,24,437	0/0:16,0:16:17.20:0,17,452	0/0:12,0:11:26.89:0,27,360	1/1:11,11:22:17.54:401,18,0	1/1:3,24:27:69.24:1765,69,0	1/1:12,19:31:57.14:1420,57,0	1/1:17,19:36:72.15:1746,72,0	1/1:1,13:14:39.13:1014,39,0	1/1:6,10:16:36.12:912,36,0	1/1:3,10:13:20.28:485,20,0	1/1:5,12:17:30.10:775,30,0	1/1:5,18:23:57.20:1480,57,0	1/1:4,20:24:60.21:1573,60,0	0/0:22,0:22:54.17:0,54,955	1/1:3,12:15:36.12:927,36,0	1/1:10,7:17:12.04:315,12,0	1/1:4,8:12:12.04:316,12,0	0/0:25,0:25:66.21:0,66,1154	0/0:28,0:28:78.25:0,78,1396	0/0:16,0:16:42.12:0,42,708	1/1:10,8:18:18.06:467,18,0	1/1:6,10:16:21.07:533,21,0	1/1:4,5:9:12.04:309,12,0	1/1:7,12:19:33.11:866,33,0	1/1:8,15:23:48.16:1237,48,0	0/0:31,0:31:84.27:0,84,1509	1/1:0,2:2:6.02:157,6,0
chr10	49092092	.	T	TAA	6112.88	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=16.215;DP=493;FS=12.680;HRun=7;HaplotypeScore=239.2398;InbreedingCoeff=0.9559;MQ=56.67;MQ0=0;MQRankSum=-16.090;QD=19.53;ReadPosRankSum=-2.311;VQSLOD=0.4602;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:81.21:0,81,933	0/0:8,0:8:24.07:0,24,279	0/0:10,0:10:23.85:0,24,248	0/0:13,0:12:21.03:0,21,224	1/1:3,17:20:48.84:639,49,0	1/1:6,0:29:68.45:350,68,0	1/1:11,0:25:29.45:164,29,0	1/1:16,17:33:60.16:888,60,0	1/1:4,0:14:28.14:138,28,0	1/1:9,8:17:35.99:442,36,0	1/1:3,12:15:39.40:538,39,0	1/1:6,0:13:20.07:104,20,0	1/1:10,0:24:45.93:248,46,0	1/1:12,11:23:33.11:499,33,0	0/0:20,0:20:60.15:0,60,678	1/1:3,0:14:34.09:174,34,0	1/1:1,9:10:17.09:227,17,0	1/1:7,2:9:4.83:51,5,0	0/0:25,0:25:57.15:0,57,663	0/0:29,0:29:81.23:0,81,943	0/0:13,0:13:33.08:0,33,374	1/1:3,0:10:20.26:112,20,0	1/1:3,0:15:22.61:133,23,0	1/1:1,0:6:14.45:78,14,0	1/1:0,16:16:45.15:685,45,0	1/1:5,12:17:36.12:552,36,0	0/0:30,0:30:87.24:0,87,1002	1/1:0,2:2:6.02:92,6,0
chr10	49092101	.	A	AACAT	19633.76	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=15.529;DP=481;FS=6.392;HRun=0;HaplotypeScore=172.9072;InbreedingCoeff=0.9776;MQ=62.45;MQ0=0;MQRankSum=-16.369;QD=65.23;ReadPosRankSum=-1.678;VQSLOD=5.9694;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:81.27:0,81,1540	0/0:10,0:10:30.08:0,30,520	0/0:12,0:12:33.04:0,33,525	0/0:11,0:11:27.09:0,27,464	1/1:0,23:24:47.61:1239,48,0	1/1:0,26:27:75.26:2081,75,0	1/1:1,20:22:60.21:1588,60,0	1/1:1,24:27:75.23:1923,75,0	1/1:0,12:13:36.12:986,36,0	1/1:1,14:17:48.16:1217,48,0	1/1:2,18:22:48.16:1262,48,0	1/1:1,8:11:24.08:666,24,0	1/1:2,17:19:24.06:1368,24,0	1/1:0,13:13:33.11:838,33,0	0/0:21,0:21:60.21:0,60,1158	1/1:0,14:15:36.12:999,36,0	1/1:2,9:11:21.02:446,21,0	1/1:0,5:6:9.03:246,9,0	0/0:25,0:25:69.21:0,69,1241	0/0:31,0:31:93.28:0,93,1713	0/0:10,0:10:30.10:0,30,599	1/1:4,10:14:27.09:729,27,0	1/1:0,14:16:33.11:914,33,0	1/1:0,5:5:15.05:413,15,0	1/1:1,18:20:54.19:1439,54,0	1/1:3,12:15:42.14:1059,42,0	0/0:31,0:31:90.29:0,90,1731	1/1:1,2:3:9.03:220,9,0
chr10	49092348	.	AGTGAATCTTAGCCT	A	17527.99	PASS	AC=36;AF=0.667;AN=54;BaseQRankSum=16.186;DP=449;FS=0.386;HRun=0;HaplotypeScore=202.6416;InbreedingCoeff=0.9316;MQ=102.37;MQ0=0;MQRankSum=-15.430;QD=87.64;ReadPosRankSum=3.432;VQSLOD=4.7552;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,111,7177	0/0:7,0:7:21.07:0,21,1485	0/0:36,0:36:99:0,99,6304	0/0:26,0:26:75.15:0,75,4449	1/1:1,8:8:18.02:660,18,0	1/1:2,9:11:27.09:1152,27,0	1/1:3,12:15:33.11:1407,33,0	1/1:6,13:19:36.12:1536,36,0	1/1:3,13:16:36.12:1536,36,0	1/1:0,5:5:15.05:558,15,0	1/1:1,4:5:6.02:256,6,0	1/1:3,16:19:42.14:1792,42,0	1/1:0,10:10:18.06:768,18,0	1/1:0,12:12:30.10:1280,30,0	0/0:17,0:17:48.16:0,48,3044	1/1:0,20:20:51.18:2173,51,0	1/1:0,7:7:9.03:384,9,0	./.	0/0:24,0:24:72.25:0,72,4452	0/0:29,0:29:87.30:0,87,5946	0/0:31,0:31:93.32:0,93,6576	1/1:1,6:7:9.03:384,9,0	1/1:0,3:3:9.03:384,9,0	1/1:3,13:16:30.06:1113,30,0	1/1:4,14:18:30.10:1249,30,0	1/1:1,5:6:15.05:640,15,0	0/0:37,0:36:99:0,102,6798	1/1:0,2:2:6.02:256,6,0
chr10	49092616	.	GCC	G	4704.35	PASS	AB=0.700;AC=37;AF=0.661;AN=56;BaseQRankSum=16.551;DP=515;FS=36.116;HRun=3;HaplotypeScore=186.8864;InbreedingCoeff=0.8765;MQ=56.07;MQ0=0;MQRankSum=-16.194;QD=16.45;ReadPosRankSum=2.035;VQSLOD=0.1267;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,117,2257	0/0:9,0:9:27.09:0,27,522	0/0:5,0:5:15:0,15,185	0/0:8,0:8:9.71:0,10,208	0/1:12,9:21:0.02:1,0,0	1/1:7,16:23:39.07:400,39,0	1/1:3,21:24:54.12:551,54,0	1/1:10,7:17:18.04:186,18,0	1/1:1,11:12:30.06:303,30,0	1/1:4,9:13:27.06:277,27,0	1/1:3,7:10:12.03:122,12,0	1/1:3,23:26:66.13:664,66,0	1/1:1,15:16:39.07:387,39,0	1/1:3,16:19:42.09:422,42,0	0/0:14,0:14:42.14:0,42,812	1/1:3,11:14:24.03:237,24,0	1/1:5,8:13:18.04:180,18,0	1/1:4,6:10:15.03:152,15,0	0/0:28,0:28:75.25:0,75,1416	0/0:20,0:20:60.21:0,60,1150	0/0:76,0:76:99:0,226,4315	1/1:6,5:11:9.46:84,9,0	1/1:7,1:8:3:30,3,0	1/1:8,10:18:17.95:180,18,0	1/1:3,11:14:30.06:305,30,0	1/1:8,5:13:1.69:130,2,0	0/0:29,0:29:87.27:0,87,1627	1/1:1,3:4:9.02:93,9,0
chr10	49092620	.	AGGC	A	5037.95	PASS	AB=0.750;AC=38;AF=0.679;AN=56;BaseQRankSum=16.632;DP=430;FS=34.042;HRun=0;HaplotypeScore=166.9880;InbreedingCoeff=0.8275;MQ=62.34;MQ0=0;MQRankSum=-16.081;QD=24.34;ReadPosRankSum=2.655;VQSLOD=2.9114;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,120,2916	0/0:9,0:9:27.07:0,27,613	0/0:7,0:7:18.03:0,18,321	0/1:8,0:8:30.24:30,0,242	0/1:0,9:9:0.02:1,0,0	1/1:0,16:16:39.05:408,39,0	1/1:0,21:21:54.14:580,54,0	1/1:0,7:7:18.06:221,18,0	1/1:0,11:11:30.07:323,30,0	1/1:0,9:9:27.08:321,27,0	1/1:1,7:8:13.58:131,14,0	1/1:1,23:24:60.16:656,60,0	1/1:0,15:15:39.06:403,39,0	1/1:0,16:16:42.10:443,42,0	0/0:15,0:15:45.15:0,45,1109	1/1:0,11:11:21.91:253,22,0	1/1:0,8:8:18.04:191,18,0	1/1:0,6:6:15.05:178,15,0	0/0:27,0:27:79.49:0,79,1825	0/0:20,0:20:60.21:0,60,1478	0/0:78,0:78:99:0,235,5663	1/1:0,5:5:8.55:77,9,0	1/1:0,1:1:3.01:31,3,0	1/1:1,10:11:17.95:187,18,0	1/1:0,11:11:30.08:330,30,0	1/1:2,5:7:11.43:164,11,0	0/0:27,0:27:81.28:0,81,1992	1/1:0,3:3:9.03:108,9,0
chr10	49092626	.	AG	A	5930.15	PASS	AB=0.526;AC=37;AF=0.661;AN=56;BaseQRankSum=17.193;DP=464;FS=31.566;HRun=1;HaplotypeScore=156.3529;InbreedingCoeff=0.9140;MQ=63.86;MQ0=0;MQRankSum=-15.067;QD=26.71;ReadPosRankSum=1.700;VQSLOD=2.5283;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,123,1939	0/0:8,0:8:24.07:0,24,361	0/0:7,0:7:17.08:0,17,205	0/0:8,0:9:15.68:0,16,255	0/1:1,9:10:0.01:1,0,0	1/1:1,16:17:39.08:438,39,0	1/1:2,21:23:57.15:654,57,0	1/1:2,7:9:21.06:249,21,0	1/1:3,11:14:36.10:415,36,0	1/1:1,9:10:30.08:354,30,0	1/1:0,8:8:15:181,15,0	1/1:3,23:26:66.17:753,66,0	1/1:3,15:18:48.09:522,48,0	1/1:0,16:16:42.12:483,42,0	0/0:16,0:16:48.14:0,48,741	1/1:1,11:12:30.07:341,30,0	1/1:2,8:10:21.05:236,21,0	1/1:1,6:7:15.05:179,15,0	0/0:28,0:28:82.52:0,83,1289	0/0:23,0:23:69.22:0,69,1076	0/0:84,0:84:99:0,253,3979	1/1:1,5:6:5.75:71,6,0	1/1:0,1:1:3.01:35,3,0	1/1:0,11:11:20.97:242,21,0	1/1:1,11:12:33.09:381,33,0	1/1:1,7:8:21.05:248,21,0	0/0:26,0:26:78.27:0,78,1247	1/1:1,3:4:12.04:149,12,0
chr10	49092930	.	CA	C	13478.37	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=10.442;DP=564;FS=0.690;HRun=1;HaplotypeScore=77.1167;InbreedingCoeff=0.9991;MQ=77.81;MQ0=1;MQRankSum=-4.267;QD=36.14;ReadPosRankSum=2.455;VQSLOD=5.1523;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:66.18:0,66,1002	0/0:12,0:12:36.12:0,36,575	0/0:17,0:17:51.14:0,51,770	0/0:13,0:13:24.42:0,24,451	1/1:0,22:22:60.19:801,60,0	1/1:0,21:21:54.18:754,54,0	1/1:0,28:28:72.24:1005,72,0	1/1:0,33:33:96.24:1265,96,0	1/1:0,23:23:57.19:793,57,0	1/1:0,18:18:48.12:649,48,0	1/1:0,11:11:27.09:366,27,0	1/1:0,11:11:27.09:376,27,0	1/1:1,22:23:66.18:899,66,0	1/1:0,26:26:66.22:923,66,0	0/0:35,0:35:99:0,102,1572	1/1:0,20:20:51.16:713,51,0	1/1:0,17:17:39.13:545,39,0	1/1:1,23:24:41.20:817,41,0	0/0:21,0:21:63.21:0,63,1007	0/0:19,0:19:57.19:0,57,896	0/0:19,0:18:51.16:0,51,787	1/1:0,10:10:30.10:419,30,0	1/1:0,11:11:27.09:376,27,0	1/1:0,26:26:66.22:916,66,0	1/1:0,18:18:45.15:621,45,0	1/1:0,19:19:57.18:779,57,0	0/0:33,0:33:99:0,99,1535	1/1:0,12:12:33.11:461,33,0
chr10	49093099	.	GA	G	6933.45	PASS	AB=0.929;AC=37;AF=0.661;AN=56;BaseQRankSum=12.217;DP=515;FS=3.400;HRun=6;HaplotypeScore=135.4349;InbreedingCoeff=0.9206;MQ=68.94;MQ0=1;MQRankSum=-3.470;QD=20.04;ReadPosRankSum=0.997;VQSLOD=3.2597;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:81.24:0,81,1035	0/0:5,0:5:12.04:0,12,158	0/0:22,0:15:36.15:0,36,358	0/0:32,0:22:45.82:0,46,509	1/1:22,0:22:49.56:405,50,0	1/1:20,0:20:53.39:470,53,0	1/1:15,2:17:38.73:296,39,0	1/1:17,0:17:15.46:168,15,0	1/1:10,0:10:25.52:184,26,0	1/1:21,0:21:51.87:425,52,0	1/1:19,0:19:44.43:379,44,0	1/1:17,0:17:38.76:322,39,0	1/1:21,0:21:58.26:454,58,0	1/1:11,0:11:29.04:226,29,0	0/0:13,0:13:39.11:0,39,498	0/1:12,1:13:9.56:189,0,10	1/1:21,4:25:62.91:537,63,0	1/1:30,0:30:57.30:646,57,0	0/0:16,0:16:42.14:0,42,551	0/0:18,0:18:48.16:0,48,631	0/0:11,0:11:33.11:0,33,434	1/1:21,1:22:55.57:436,56,0	1/1:19,0:19:50.96:437,51,0	1/1:18,0:17:44.26:368,44,0	1/1:11,2:13:35.12:279,35,0	1/1:21,0:21:53.72:436,54,0	0/0:22,0:22:66.19:0,66,848	1/1:10,0:10:30.03:277,30,0
chr10	49093104	.	AAG	A	12274.21	PASS	AB=0.609;AC=37;AF=0.661;AN=56;BaseQRankSum=12.456;DP=521;FS=8.208;HRun=0;HaplotypeScore=131.7264;InbreedingCoeff=0.9021;MQ=67.21;MQ0=1;MQRankSum=-5.649;QD=34.67;ReadPosRankSum=-1.109;VQSLOD=6.4405;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:86.83:0,87,1600	0/0:5,0:5:15.04:0,15,265	0/0:22,0:15:7.86:0,8,510	0/0:32,0:21:42.63:0,43,729	1/1:0,20:20:55.77:675,56,0	1/1:2,17:19:56.22:796,56,0	1/1:5,13:18:50.36:665,50,0	1/1:4,12:16:12.53:489,13,0	1/1:1,9:10:27.05:353,27,0	1/1:8,18:26:70.99:839,71,0	1/1:3,15:18:47.51:606,48,0	1/1:0,16:16:39.12:528,39,0	1/1:1,21:22:62:840,62,0	1/1:3,11:14:34.79:444,35,0	0/0:13,0:13:39.12:0,39,743	0/1:5,9:14:25.98:313,0,26	1/1:7,17:24:63.18:861,63,0	1/1:6,24:30:56.93:1042,57,0	0/0:14,0:14:42.14:0,42,839	0/0:18,0:18:54.16:0,54,1009	0/0:11,0:11:33.11:0,33,658	1/1:1,20:21:57.08:743,57,0	1/1:1,18:19:56.92:750,57,0	1/1:6,15:21:53.69:662,54,0	1/1:6,9:15:41.01:512,41,0	1/1:3,18:20:56.77:752,57,0	0/0:22,0:22:66.23:0,66,1304	1/1:0,10:10:30.10:406,30,0
chr10	49093106	.	GGAA	G	8488.59	PASS	AB=0.963;AC=35;AF=0.625;AN=56;BaseQRankSum=12.476;DP=521;FS=21.449;HRun=0;HaplotypeScore=154.7726;InbreedingCoeff=0.7788;MQ=67.25;MQ0=1;MQRankSum=-1.650;QD=24.12;ReadPosRankSum=1.464;VQSLOD=3.4100;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:84.27:0,84,1946	0/0:5,0:5:15.05:0,15,367	0/0:24,0:16:22.44:0,22,820	0/0:33,0:21:47.19:0,47,939	1/1:20,0:20:56.37:563,56,0	1/1:19,0:19:48.62:560,49,0	1/1:16,2:18:16.34:373,16,0	0/1:14,2:16:53.03:123,0,53	0/1:10,0:10:6.83:175,0,7	1/1:19,6:25:36.40:750,36,0	1/1:15,3:18:47.92:460,48,0	1/1:17,0:17:41.20:408,41,0	1/1:22,0:22:43.02:476,43,0	1/1:13,1:14:24.99:325,25,0	0/0:12,0:12:36.12:0,36,887	0/1:13,0:13:65.64:224,0,66	1/1:23,0:23:35.14:460,35,0	1/1:29,0:29:69.02:798,69,0	0/0:15,0:15:45.15:0,45,1105	0/0:18,0:18:54.19:0,54,1326	0/0:11,0:11:33.11:0,33,799	1/1:20,0:21:43.38:409,43,0	1/1:19,0:19:56.49:567,56,0	1/1:15,5:19:40.51:532,41,0	1/1:15,1:16:33.59:419,34,0	1/1:21,1:21:58.96:570,59,0	0/0:23,0:23:69.22:0,69,1608	1/1:10,0:10:30.03:296,30,0
chr10	49093109	.	A	AAAG	17540.25	PASS	AB=0.556;AC=37;AF=0.661;AN=56;BaseQRankSum=11.123;DP=540;FS=18.930;HRun=0;HaplotypeScore=129.2119;InbreedingCoeff=0.9123;MQ=68.21;MQ0=1;MQRankSum=-4.244;QD=48.72;ReadPosRankSum=-0.710;VQSLOD=5.1955;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:72.25:0,72,1229	0/0:5,0:5:15.05:0,15,236	0/0:30,0:21:42.52:0,43,596	0/0:34,0:21:39.59:0,40,544	1/1:2,18:20:60.15:1129,60,0	1/1:2,16:21:57.13:1133,57,0	1/1:7,8:16:42.10:709,42,0	1/1:14,3:17:10.28:432,10,0	1/1:2,7:9:24.05:447,24,0	1/1:9,15:25:69.18:1303,69,0	1/1:3,15:18:48.16:954,48,0	1/1:4,12:16:42.10:803,42,0	1/1:5,16:23:60.20:1114,60,0	1/1:5,9:16:36.09:662,36,0	0/0:13,0:13:39.12:0,39,626	0/1:3,9:15:16.86:523,0,17	1/1:4,16:21:50.95:1004,51,0	1/1:6,23:29:69.42:1541,69,0	0/0:16,0:16:48.14:0,48,730	0/0:20,0:20:38.08:0,38,880	0/0:11,0:11:30.10:0,30,497	1/1:8,14:23:60.05:1005,60,0	1/1:3,17:20:57.14:1117,57,0	1/1:6,14:19:51.13:979,51,0	1/1:3,8:14:39.08:738,39,0	1/1:4,16:23:66.21:1231,66,0	0/0:23,0:23:63.22:0,63,1046	1/1:3,10:13:39.12:717,39,0
chr10	49093227	.	GAGAAGAAGA	G	1260.76	PASS	AB=0.948;AC=15;AF=0.288;AN=52;BaseQRankSum=2.330;DP=463;FS=3.557;HRun=0;HaplotypeScore=154.5079;InbreedingCoeff=0.3290;MQ=52.70;MQ0=43;MQRankSum=0.586;QD=7.78;ReadPosRankSum=1.259;VQSLOD=2.4474;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:15:21.48:0,21,397	0/0:3,0:3:3.95:0,4,54	./.	./.	0/0:15,0:12:7.98:0,8,65	0/0:20,0:19:14.51:0,15,108	0/0:16,0:13:8.64:0,9,49	0/0:20,0:17:8.14:0,8,56	0/0:15,0:13:16.83:0,17,116	0/0:16,0:14:10.49:0,10,57	1/1:6,0:6:1.16:3,1,0	0/1:19,0:16:8.10:13,0,8	0/1:19,0:19:12.98:13,0,71	0/0:12,0:11:2.78:0,3,15	0/0:19,0:19:13.35:0,13,97	0/0:10,0:10:3.31:0,3,15	0/0:21,0:17:6.32:0,6,26	0/0:14,0:14:2.87:0,3,22	0/1:11,6:14:15.20:200,0,15	1/1:6,2:7:6.02:78,6,0	1/1:13,0:12:15.05:244,15,0	0/1:17,0:11:8.07:11,0,8	1/1:16,0:13:11.98:32,12,0	0/1:18,0:17:11.36:17,0,11	0/0:19,0:17:9.09:0,9,47	0/0:13,0:11:7.88:0,8,48	1/1:29,0:27:53.65:807,54,0	0/0:15,0:10:5.73:0,6,37
chr10	49093231	.	AG	A	8553.53	PASS	AB=0.568;AC=35;AF=0.625;AN=56;BaseQRankSum=-0.315;DP=454;FS=17.235;HRun=1;HaplotypeScore=67.7536;InbreedingCoeff=0.7571;MQ=48.88;MQ0=58;MQRankSum=0.146;QD=28.32;ReadPosRankSum=0.352;VQSLOD=3.3494;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:15:34.25:0,34,482	0/0:3,0:3:9.03:0,9,117	0/0:27,0:8:11.85:0,12,240	0/0:20,0:9:22.32:0,22,302	1/1:4,10:10:27.09:375,27,0	1/1:1,18:18:54.17:732,54,0	1/1:3,13:13:36.12:486,36,0	1/1:4,18:17:31.64:599,32,0	1/1:1,14:13:36.11:481,36,0	1/1:3,14:13:33.11:458,33,0	1/1:1,6:6:17.85:221,18,0	1/1:4,14:14:39.13:542,39,0	1/1:1,19:19:57.19:785,57,0	1/1:1,10:10:21.07:291,21,0	0/0:21,0:19:51.13:0,51,646	0/1:1,8:9:13.46:229,0,13	0/1:6,15:16:6.54:413,0,7	0/1:4,9:13:14.36:283,0,14	0/0:15,0:11:8.09:0,8,315	0/0:5,0:4:12.03:0,12,147	0/0:13,0:12:30.09:0,30,410	1/1:5,11:10:27.05:354,27,0	1/1:4,13:13:36.12:494,36,0	1/1:4,15:16:25.28:596,25,0	1/1:2,17:17:42.13:550,42,0	1/1:3,10:10:30.10:417,30,0	0/0:28,0:26:73.48:0,73,1046	1/1:10,6:10:24.49:248,24,0
chr10	49093572	.	CCA	C	7884.17	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=6.046;DP=281;FS=12.669;HRun=0;HaplotypeScore=78.3159;InbreedingCoeff=0.9033;MQ=77.25;MQ0=0;MQRankSum=-4.749;QD=34.58;ReadPosRankSum=4.624;VQSLOD=6.3010;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:27.06:0,27,416	0/0:1,0:1:3.01:0,3,53	0/0:14,0:11:26:0,26,226	0/0:8,0:7:8.35:0,8,71	1/1:1,9:10:21.07:312,21,0	1/1:1,6:7:15.01:195,15,0	1/1:0,22:22:42.14:633,42,0	1/1:12,5:17:47.88:478,48,0	1/1:1,12:13:36.08:516,36,0	1/1:2,5:6:9.03:136,9,0	1/1:0,7:7:12:155,12,0	1/1:2,17:19:50.95:741,51,0	1/1:1,15:16:42.10:608,42,0	1/1:1,18:19:48.12:693,48,0	0/0:6,0:6:12.01:0,12,156	1/1:1,5:6:17.99:245,18,0	1/1:2,15:17:51.09:700,51,0	1/1:0,7:7:21.03:290,21,0	0/0:2,0:2:6.02:0,6,92	0/0:4,0:4:12.04:0,12,211	0/0:5,0:5:12.04:0,12,196	1/1:0,9:8:21.07:316,21,0	1/1:0,11:11:27.04:375,27,0	1/1:0,12:12:36.12:541,36,0	1/1:3,9:12:26.98:355,27,0	1/1:1,7:8:20.59:234,21,0	0/0:4,0:4:12.01:0,12,158	1/1:0,9:9:24.08:362,24,0
chr10	49093636	.	G	GGTTT	6909.68	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=4.121;DP=305;FS=46.103;HRun=0;HaplotypeScore=84.1748;InbreedingCoeff=0.8933;MQ=84.22;MQ0=0;MQRankSum=-5.833;QD=31.27;ReadPosRankSum=2.972;VQSLOD=2.5319;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:57.13:0,57,1015	0/0:5,0:5:15.05:0,15,314	0/0:11,0:11:23.26:0,23,488	0/0:15,0:15:42:0,42,580	1/1:7,0:8:8.05:131,8,0	1/1:0,0:10:26.99:245,27,0	1/1:5,0:16:32.87:273,33,0	1/1:6,12:19:31.21:734,31,0	1/1:3,0:16:41.79:325,42,0	1/1:5,1:6:11.55:226,12,0	1/1:3,1:4:1.36:17,1,0	1/1:7,1:14:16.55:355,17,0	1/1:5,0:12:18.93:299,19,0	1/1:2,5:7:13.50:357,13,0	0/0:3,0:3:9.03:0,9,189	1/1:1,0:11:26.49:243,26,0	1/1:3,20:26:62.98:1351,63,0	1/1:1,9:12:27.09:658,27,0	0/0:5,0:5:15.04:0,15,267	0/0:4,0:4:12.04:0,12,227	0/0:14,0:14:39.09:0,39,707	1/1:3,0:7:14.04:165,14,0	1/1:4,0:8:4.90:161,5,0	1/1:1,0:16:31.51:447,32,0	1/1:1,7:10:27.01:513,27,0	1/1:8,3:11:13.06:294,13,0	0/0:8,0:8:24.08:0,24,486	1/1:8,0:8:11.96:115,12,0
chr10	49093840	.	C	CAG	15948.19	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=9.076;DP=593;FS=1.965;HRun=0;HaplotypeScore=115.0174;InbreedingCoeff=0.9960;MQ=73.88;MQ0=2;MQRankSum=-6.239;QD=41.10;ReadPosRankSum=4.156;VQSLOD=6.5790;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,120,1712	0/0:6,0:6:18.06:0,18,262	0/0:19,0:18:40.14:0,40,543	0/0:32,0:28:71.97:0,72,887	1/1:8,13:21:26.70:504,27,0	1/1:4,15:19:38.34:676,38,0	1/1:3,24:27:57.20:1058,57,0	1/1:8,16:25:54.13:916,54,0	1/1:2,19:21:44.93:842,45,0	1/1:0,15:15:45.13:767,45,0	1/1:0,9:9:18.06:337,18,0	1/1:3,22:26:57.20:1066,57,0	1/1:3,15:18:39.13:725,39,0	1/1:2,25:27:66.19:1198,66,0	0/0:25,0:25:69.22:0,69,990	1/1:0,14:14:36.12:673,36,0	1/1:2,28:30:63.22:1178,63,0	1/1:3,34:35:75.26:1403,75,0	0/0:18,0:18:51.16:0,51,730	0/0:8,0:8:24.08:0,24,352	0/0:35,0:35:99:0,99,1392	1/1:1,13:14:39.13:694,39,0	1/1:1,9:10:21.07:393,21,0	1/1:2,25:27:62.86:1178,63,0	1/1:0,20:20:48.16:880,48,0	1/1:2,17:19:57.14:1012,57,0	0/0:20,0:20:60.20:0,60,883	1/1:0,8:8:24.08:449,24,0
chr10	49094430	.	G	GAGGACCAA	6538.12	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-0.567;DP=646;FS=4.238;HRun=0;HaplotypeScore=194.9313;InbreedingCoeff=0.9992;MQ=90.06;MQ0=0;MQRankSum=-10.091;QD=93.40;ReadPosRankSum=2.507;VQSLOD=5.4269;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:58:99:0,169,4675	0/0:10,0:10:27.09:0,27,817	0/0:26,0:26:65.30:0,65,1787	0/0:27,0:27:52.10:0,52,1827	0/0:22,0:22:66.20:0,66,1864	1/1:0,11:15:33.11:1520,33,0	1/1:1,12:23:36.12:1590,36,0	0/0:28,0:28:75.25:0,75,2147	1/1:0,9:12:26.88:1244,27,0	0/0:28,0:28:84.24:0,84,2355	0/0:15,0:15:45.15:0,45,1307	0/0:24,0:24:72.22:0,72,2049	0/0:22,0:22:63.18:0,63,1743	0/0:17,0:17:51.17:0,51,1442	0/0:34,0:34:99:0,102,2981	1/1:0,16:20:48.16:2184,48,0	0/0:28,0:28:81.24:0,81,2282	0/0:30,0:30:84.20:0,84,2321	0/0:21,0:21:57.11:0,57,1474	0/0:19,0:19:54.19:0,54,1623	0/0:39,0:39:99:0,114,3173	0/0:16,0:16:45.13:0,45,1216	0/0:18,0:18:54.18:0,54,1535	0/0:25,0:25:75.23:0,75,2071	0/0:17,0:17:51.15:0,51,1409	0/0:21,0:21:63.20:0,63,1731	0/0:21,0:21:63.20:0,63,1724	0/0:10,0:10:30.10:0,30,757
chr10	49094830	.	T	TC	5424.99	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=19.218;DP=745;FS=7.311;HRun=1;HaplotypeScore=214.8194;InbreedingCoeff=0.9770;MQ=80.97;MQ0=0;MQRankSum=-8.981;QD=11.49;ReadPosRankSum=-0.163;VQSLOD=2.7988;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,138,1746	0/0:19,0:19:54.18:0,54,701	0/0:24,0:24:56.52:0,57,735	0/0:23,0:23:63.20:0,63,790	1/1:23,0:23:58.27:297,58,0	1/1:26,0:26:40.28:232,40,0	1/1:33,1:34:67.63:426,68,0	1/1:20,2:22:28.36:207,28,0	1/1:22,0:22:35.60:168,36,0	1/1:29,0:29:63.37:360,63,0	1/1:23,1:24:55.57:404,56,0	1/1:26,1:27:52.66:295,53,0	1/1:31,2:33:31.95:351,32,0	1/1:22,2:24:43.84:259,44,0	0/0:26,0:26:78.23:0,78,985	1/1:20,0:20:40.41:187,40,0	1/1:23,0:23:34.21:195,34,0	1/1:16,0:16:42.23:215,42,0	0/0:33,0:33:56.92:0,57,342	0/0:38,0:38:75.04:0,75,468	0/0:38,0:38:80.16:0,80,458	1/1:40,1:41:77.57:593,78,0	1/1:25,1:26:46.78:310,47,0	1/1:24,0:24:33.61:167,34,0	1/1:21,1:22:59.91:394,60,0	1/1:33,0:33:61.37:356,61,0	0/0:25,0:25:43.25:0,43,313	1/1:3,0:3:3.63:10,4,0
chr10	49094956	.	G	GTGACACA	14017.23	PASS	AB=0.694;AC=22;AF=0.393;AN=56;BaseQRankSum=15.363;DP=596;FS=36.650;HRun=0;HaplotypeScore=251.2883;InbreedingCoeff=-0.2003;MQ=74.06;MQ0=0;MQRankSum=-12.267;QD=40.99;ReadPosRankSum=4.798;VQSLOD=3.1597;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,129,3519	0/0:16,0:16:48.16:0,48,1316	0/0:21,0:21:51.17:0,51,1305	0/0:13,0:13:36.12:0,36,912	1/1:7,7:14:18.53:600,19,0	0/1:10,9:21:99:1001,0,322	0/1:15,9:25:99:636,0,370	0/1:19,0:20:88.52:89,0,1210	0/1:9,11:20:64.03:1003,0,64	0/1:11,8:20:99:988,0,617	1/1:3,6:10:21.07:679,21,0	0/1:12,8:20:43.83:675,0,44	0/1:9,11:22:99:704,0,241	0/1:8,16:26:70.68:1514,0,71	0/0:30,0:30:90.31:0,90,2508	0/1:6,9:17:99:735,0,107	0/1:9,9:19:80.48:1040,0,80	0/1:10,4:14:99:693,0,341	0/0:31,0:31:90.31:0,90,2434	0/0:24,0:24:72.22:0,72,1801	0/0:55,0:55:99:0,166,4583	0/1:10,6:16:93.35:528,0,93	1/1:6,8:16:24.08:763,24,0	0/1:12,4:16:99:316,0,178	0/1:12,13:25:99:1130,0,106	0/1:10,8:18:99:733,0,429	0/0:20,0:20:60.21:0,60,1615	0/1:1,2:3:74.41:190,0,74
chr10	49094958	.	C	CTGAGGT	12061.08	PASS	AB=0.727;AC=27;AF=0.482;AN=56;BaseQRankSum=17.274;DP=598;FS=2.799;HRun=0;HaplotypeScore=251.0226;InbreedingCoeff=0.2227;MQ=73.20;MQ0=0;MQRankSum=-15.789;QD=34.96;ReadPosRankSum=2.627;VQSLOD=4.2394;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,129,3159	0/0:16,0:16:48.12:0,48,1072	0/0:20,0:20:49.99:0,50,1137	0/0:13,0:13:35.99:0,36,798	1/1:5,6:12:18.06:507,18,0	0/1:11,9:20:15.95:736,0,16	0/1:19,9:28:20.03:666,0,20	0/1:20,0:20:4.83:5,0,595	1/1:9,10:20:11.22:903,11,0	0/1:13,8:21:99:730,0,260	1/1:4,7:11:21.07:593,21,0	1/1:13,8:21:44.30:675,44,0	0/1:10,11:21:68.77:449,0,69	0/1:9,16:25:34.88:1182,0,35	0/0:30,0:30:90.30:0,90,2246	1/1:8,10:18:11.61:666,12,0	0/1:11,9:20:20.38:949,0,20	0/1:10,4:14:98.02:606,0,98	0/0:31,0:31:93.21:0,93,1918	0/0:24,0:24:72.08:0,72,1592	0/0:55,0:55:99:0,166,3995	1/1:10,6:16:27.41:513,27,0	1/1:6,8:16:26.98:685,27,0	0/1:12,4:16:18.98:244,0,19	1/1:12,13:25:55.77:1153,56,0	0/1:10,8:18:99:636,0,114	0/0:20,0:20:57.17:0,57,1350	0/1:1,2:3:30.30:164,0,30
chr10	49095001	.	T	TA	17375.98	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=6.106;DP=703;FS=6.504;HRun=1;HaplotypeScore=165.8490;InbreedingCoeff=0.9975;MQ=75.95;MQ0=0;MQRankSum=-10.433;QD=39.05;ReadPosRankSum=2.031;VQSLOD=3.9633;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,144,1832	0/0:14,0:14:42.12:0,42,531	0/0:21,0:21:60.14:0,60,745	0/0:15,0:15:36.10:0,36,448	1/1:1,19:20:50.96:639,51,0	1/1:1,24:25:66.22:988,66,0	1/1:1,32:34:96.25:1368,96,0	1/1:2,29:31:90.30:1335,90,0	1/1:2,23:25:66.18:953,66,0	1/1:1,25:26:78.26:1165,78,0	1/1:1,15:16:42.06:575,42,0	1/1:3,25:28:69.23:1024,69,0	1/1:1,32:33:84.28:1249,84,0	1/1:1,24:25:66.19:950,66,0	0/0:23,0:23:69.21:0,69,881	1/1:1,18:19:48.16:699,48,0	1/1:2,24:26:72.20:1053,72,0	1/1:0,16:16:48.16:718,48,0	0/0:28,0:28:78.25:0,78,1013	0/0:17,0:17:48.16:0,48,623	0/0:65,0:65:99:0,193,2489	1/1:4,13:17:45.07:614,45,0	1/1:1,19:20:51.17:764,51,0	1/1:0,28:28:69.23:1033,69,0	1/1:2,25:27:72.20:1043,72,0	1/1:0,23:23:66.22:988,66,0	0/0:25,0:24:69.22:0,69,895	1/1:0,6:6:15.05:218,15,0
chr10	49095526	.	GGAGCAGGA	G	22138.47	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=16.212;DP=551;FS=0.000;HRun=0;HaplotypeScore=182.6958;InbreedingCoeff=0.9767;MQ=88.67;MQ0=0;MQRankSum=-17.723;QD=64.54;ReadPosRankSum=4.105;VQSLOD=4.4086;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:75.26:0,75,3144	0/0:14,0:14:42.14:0,42,1854	0/0:29,0:29:78.27:0,78,3208	0/0:25,0:25:69.02:0,69,2506	1/1:4,24:28:45.15:1288,45,0	1/1:2,20:22:54.19:1548,54,0	1/1:1,11:12:27.09:774,27,0	1/1:7,38:45:99:3114,114,0	1/1:2,10:12:30.10:860,30,0	1/1:2,21:23:66.18:1781,66,0	1/1:5,15:20:36.12:1017,36,0	1/1:2,25:27:66.23:1892,66,0	1/1:1,13:14:39.13:1118,39,0	1/1:1,14:15:39.09:1052,39,0	0/0:18,0:18:51.16:0,51,2145	1/1:1,12:13:33.11:946,33,0	1/1:2,19:21:45.12:1127,45,0	1/1:2,8:10:21.07:602,21,0	0/0:28,0:28:81.28:0,81,3490	0/0:28,0:28:84.27:0,84,3581	0/0:21,0:21:60.21:0,60,2607	1/1:4,13:17:36.12:1032,36,0	1/1:2,13:15:36.12:1032,36,0	1/1:3,5:8:5.81:172,6,0	1/1:3,7:10:21.07:602,21,0	1/1:3,23:27:69.24:1903,69,0	0/0:18,0:18:51.17:0,51,2163	1/1:0,4:4:12:278,12,0
chr10	49095936	.	CATATATGTATATGTAT	C	13674.44	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=13.536;DP=476;FS=2.068;HRun=0;HaplotypeScore=370.5453;InbreedingCoeff=0.9006;MQ=64.04;MQ0=0;MQRankSum=-11.970;QD=44.98;ReadPosRankSum=4.993;VQSLOD=3.1244;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:81.28:0,81,5057	0/0:17,0:17:48.16:0,48,2679	0/0:10,0:10:14.22:0,14,468	0/0:11,0:10:17.49:0,17,238	1/1:17,6:23:24.08:561,24,0	1/1:9,7:16:27.09:978,27,0	1/1:10,0:10:3.01:52,3,0	1/1:25,0:25:6.01:83,6,0	1/1:8,7:15:21.07:944,21,0	1/1:14,9:23:27.09:1211,27,0	1/1:11,5:16:18.04:617,18,0	1/1:8,11:19:39.12:1422,39,0	1/1:11,8:19:24.08:1033,24,0	1/1:8,9:17:30.10:1198,30,0	0/0:24,0:24:72.25:0,72,5064	1/1:12,12:24:36.12:1607,36,0	1/1:7,4:11:15.02:531,15,0	1/1:3,3:6:9.03:346,9,0	0/0:19,0:19:57.18:0,57,2901	0/0:22,0:22:63.22:0,63,4481	0/0:11,0:11:33.11:0,33,2198	1/1:17,5:22:15.05:566,15,0	1/1:14,6:20:15.05:518,15,0	1/1:2,3:5:9.03:259,9,0	1/1:4,4:8:9.03:367,9,0	1/1:13,8:21:24.08:1107,24,0	0/0:30,0:30:87.30:0,87,5932	1/1:2,2:4:6.02:275,6,0
chr10	49095960	.	AAAATGTATATGTTTTAGTAT	A	16314.20	PASS	AC=34;AF=0.654;AN=52;BaseQRankSum=13.961;DP=281;FS=8.691;HRun=0;HaplotypeScore=309.9045;InbreedingCoeff=0.9279;MQ=65.41;MQ0=0;MQRankSum=-13.781;QD=149.67;ReadPosRankSum=10.023;VQSLOD=3.3445;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,102,6791	0/0:11,0:11:30.09:0,30,2507	0/0:9,0:8:24.08:0,24,1186	0/0:6,0:4:12.04:0,12,661	1/1:0,6:6:18.06:642,18,0	1/1:0,7:7:21.07:1089,21,0	./.	./.	1/1:0,7:7:21.07:1153,21,0	1/1:0,9:9:27.09:1471,27,0	1/1:0,5:5:15.05:742,15,0	1/1:0,11:11:33.11:1677,33,0	1/1:0,8:8:24.08:1272,24,0	1/1:0,9:9:27.09:1417,27,0	0/0:29,0:29:87.30:0,87,6891	1/1:0,12:12:36.12:1965,36,0	1/1:0,4:4:12.04:628,12,0	1/1:0,3:3:9.03:435,9,0	0/0:15,0:15:45.13:0,45,2947	0/0:24,0:24:72.25:0,72,5706	0/0:12,0:12:36.12:0,36,2957	1/1:0,5:5:15.05:715,15,0	1/1:0,6:6:18.02:687,18,0	1/1:0,3:3:6.02:284,6,0	1/1:0,4:4:9.03:456,9,0	1/1:0,8:8:24.08:1345,24,0	0/0:32,0:32:93.30:0,93,7327	1/1:0,2:2:6.02:334,6,0
chr10	49095976	.	AGTAT	A	13906.80	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=17.203;DP=442;FS=0.749;HRun=0;HaplotypeScore=334.7397;InbreedingCoeff=0.9890;MQ=62.13;MQ0=0;MQRankSum=-17.106;QD=51.89;ReadPosRankSum=3.569;VQSLOD=4.2362;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:84.26:0,84,2306	0/0:9,0:9:27.08:0,27,720	0/0:11,0:10:30.10:0,30,864	0/0:9,0:7:18.06:0,18,448	1/1:6,10:16:23.51:360,24,0	1/1:7,11:18:54.18:1060,54,0	1/1:0,10:10:30.10:582,30,0	1/1:0,21:21:45.15:941,45,0	1/1:7,6:13:39.13:770,39,0	1/1:9,5:14:39.13:776,39,0	1/1:5,5:10:30.07:539,30,0	1/1:11,12:23:68.97:1297,69,0	1/1:8,7:15:45.15:850,45,0	1/1:9,9:18:54.17:994,54,0	0/0:30,0:30:90.29:0,90,2528	1/1:12,10:22:66.23:1307,66,0	1/1:4,13:17:36.12:688,36,0	1/1:3,3:6:18.03:303,18,0	0/0:17,0:17:51.15:0,51,1220	0/0:22,0:22:66.21:0,66,1823	0/0:12,0:12:36.12:0,36,990	1/1:5,6:11:29.59:527,30,0	1/1:6,8:14:42.10:784,42,0	1/1:3,4:7:12.04:219,12,0	1/1:4,5:9:24.08:441,24,0	1/1:8,11:19:57.20:1158,57,0	0/0:35,0:35:99:0,105,2809	1/1:2,3:5:15.05:309,15,0
chr10	49096000	.	TTCG	T	16749.24	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=18.857;DP=550;FS=9.329;HRun=0;HaplotypeScore=378.8214;InbreedingCoeff=0.9961;MQ=73.93;MQ0=0;MQRankSum=-18.718;QD=46.92;ReadPosRankSum=2.159;VQSLOD=2.7601;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:90.27:0,90,2125	0/0:11,0:11:33.11:0,33,813	0/0:19,0:19:54.18:0,54,1234	0/0:15,0:15:38.80:0,39,826	1/1:0,17:17:37.06:601,37,0	1/1:0,22:22:66.22:1130,66,0	1/1:0,15:15:39.13:686,39,0	1/1:0,24:24:45.15:816,45,0	1/1:0,19:19:57.20:993,57,0	1/1:0,22:22:63.21:1075,63,0	1/1:0,12:12:36.12:603,36,0	1/1:0,26:26:77.62:1287,78,0	1/1:1,22:23:69.21:1106,69,0	1/1:0,28:28:84.22:1359,84,0	0/0:31,0:31:93.32:0,93,2261	1/1:0,26:26:78.27:1373,78,0	1/1:0,18:18:51.17:878,51,0	1/1:0,7:7:20.99:342,21,0	0/0:19,0:19:57.20:0,57,1373	0/0:21,0:21:63.22:0,63,1552	0/0:13,0:13:39.13:0,39,914	1/1:0,16:16:40.69:650,41,0	1/1:0,21:21:57.19:963,57,0	1/1:0,12:12:21.07:363,21,0	1/1:0,15:15:42.13:696,42,0	1/1:0,29:29:87.30:1560,87,0	0/0:34,0:34:99:0,102,2467	1/1:0,5:5:15.05:269,15,0
chr10	49096006	.	CTT	C	14711.78	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=18.885;DP=555;FS=9.283;HRun=2;HaplotypeScore=377.3805;InbreedingCoeff=0.9961;MQ=73.11;MQ0=0;MQRankSum=-18.739;QD=40.75;ReadPosRankSum=1.472;VQSLOD=2.0182;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:87.30:0,87,1754	0/0:12,0:12:36.12:0,36,711	0/0:19,0:19:54.14:0,54,1035	0/0:14,0:14:33.11:0,33,643	1/1:0,17:17:36.12:520,36,0	1/1:1,22:23:69.23:1024,69,0	1/1:0,15:15:39.13:595,39,0	1/1:0,24:24:45.15:710,45,0	1/1:0,19:19:57.19:861,57,0	1/1:0,22:22:63.17:923,63,0	1/1:0,12:12:36.12:522,36,0	1/1:0,26:26:76.46:1111,76,0	1/1:1,23:24:72.17:1015,72,0	1/1:2,28:30:90.06:1277,90,0	0/0:30,0:30:90.31:0,90,1819	1/1:0,26:26:78.26:1191,78,0	1/1:0,18:18:51.17:763,51,0	1/1:0,7:7:20.66:293,21,0	0/0:18,0:18:54.18:0,54,1072	0/0:25,0:25:75.26:0,75,1524	0/0:16,0:16:48.16:0,48,956	1/1:0,16:16:39.60:564,40,0	1/1:0,21:21:57.19:835,57,0	1/1:0,12:12:21.07:314,21,0	1/1:0,15:15:42.10:601,42,0	1/1:0,29:29:87.30:1357,87,0	0/0:31,0:31:93.32:0,93,1871	1/1:0,5:5:15.05:234,15,0
chr10	49096220	.	CA	C	15840.20	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=15.635;DP=684;FS=8.034;HRun=3;HaplotypeScore=111.2708;InbreedingCoeff=1.0000;MQ=79.61;MQ0=0;MQRankSum=-8.255;QD=33.00;ReadPosRankSum=3.716;VQSLOD=4.3442;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:78.24:0,78,1103	0/0:13,0:13:36.12:0,36,518	0/0:24,0:24:54.08:0,54,707	0/0:22,0:22:61.01:0,61,774	1/1:3,20:22:48.15:594,48,0	1/1:2,21:23:60.19:744,60,0	1/1:1,25:26:75.24:929,75,0	1/1:0,30:30:90.26:1091,90,0	1/1:0,14:14:42.13:520,42,0	1/1:3,40:43:99:1412,114,0	1/1:0,18:18:54.17:668,54,0	1/1:3,31:34:72.23:889,72,0	1/1:0,18:18:51.16:632,51,0	1/1:1,32:33:93.29:1152,93,0	0/0:32,0:32:96.31:0,96,1364	1/1:0,23:23:63.20:780,63,0	1/1:0,40:40:99:1338,108,0	1/1:1,17:18:42.13:521,42,0	0/0:19,0:19:57.08:0,57,742	0/0:22,0:22:66.21:0,66,932	0/0:15,0:15:39.13:0,39,562	1/1:0,24:24:60.19:743,60,0	1/1:1,23:24:63.20:780,63,0	1/1:0,27:27:78.25:967,78,0	1/1:0,21:21:54.17:669,54,0	1/1:0,27:27:72.23:891,72,0	0/0:30,0:30:90.29:0,90,1274	1/1:0,14:14:42.13:521,42,0
chr10	49098215	.	AC	A	18654.11	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=21.032;DP=841;FS=4.737;HRun=1;HaplotypeScore=133.5569;InbreedingCoeff=0.9996;MQ=86.84;MQ0=0;MQRankSum=-7.584;QD=33.73;ReadPosRankSum=3.957;VQSLOD=4.4788;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,120,1889	0/0:15,0:15:45.12:0,45,682	0/0:27,0:27:72.05:0,72,1059	0/0:33,0:33:79.60:0,80,1385	1/1:0,34:34:99:1137,99,0	1/1:0,26:26:69.22:855,69,0	1/1:2,25:27:66.19:818,66,0	1/1:0,31:31:93.19:1063,93,0	1/1:2,32:34:42.33:1030,42,0	1/1:1,39:40:99:1450,120,0	1/1:0,22:22:66.21:818,66,0	1/1:0,35:35:99:1261,102,0	1/1:1,38:39:99:1246,102,0	1/1:1,37:38:99:1212,99,0	0/0:38,0:38:91.54:0,92,1693	1/1:6,28:34:99:1165,99,0	1/1:1,29:30:78.24:955,78,0	1/1:1,21:22:63.17:765,63,0	0/0:27,0:27:81.25:0,81,1263	0/0:30,0:30:87.30:0,87,1386	0/0:45,0:45:99:0,132,2107	1/1:0,33:33:96.30:1189,96,0	1/1:1,23:24:63.20:781,63,0	1/1:0,24:24:69.22:855,69,0	1/1:0,23:23:69.22:854,69,0	1/1:1,25:26:75.24:929,75,0	0/0:33,0:32:99:0,99,1523	1/1:1,10:11:23.56:269,24,0
chr10	49098995	.	G	GC	17039.97	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=17.251;DP=803;FS=3.207;HRun=5;HaplotypeScore=127.4462;InbreedingCoeff=0.9987;MQ=80.57;MQ0=0;MQRankSum=-2.743;QD=32.71;ReadPosRankSum=1.578;VQSLOD=3.2582;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,110,1334	0/0:8,0:8:21.03:0,21,215	0/0:22,0:22:32.29:0,32,465	0/0:44,0:42:95.45:0,95,913	1/1:4,26:30:72.23:935,72,0	1/1:0,24:24:66.21:862,66,0	1/1:6,24:30:63.20:823,63,0	1/1:5,20:25:60.10:721,60,0	1/1:3,35:38:96.31:1252,96,0	1/1:3,22:25:63.18:796,63,0	1/1:1,17:18:48.62:609,49,0	1/1:2,30:32:78.21:1000,78,0	1/1:2,24:26:69.22:900,69,0	1/1:3,29:32:78.25:1017,78,0	0/0:45,0:45:99:0,132,1411	1/1:2,29:31:81.26:1054,81,0	1/1:2,24:26:66.21:862,66,0	1/1:2,21:23:60.20:784,60,0	0/0:20,0:20:57.12:0,57,594	0/0:26,0:26:75.18:0,75,800	0/0:46,0:46:99:0,129,1387	1/1:2,29:31:87.27:1117,87,0	1/1:3,28:31:66.21:858,66,0	1/1:2,34:35:99:1292,99,0	1/1:1,30:31:84.27:1089,84,0	1/1:0,23:23:63.18:794,63,0	0/0:23,0:23:66.16:0,66,709	1/1:0,9:9:21.07:274,21,0
chr10	49099286	.	TAAA	T	5766.31	PASS	AB=0.592;AC=30;AF=0.536;AN=56;BaseQRankSum=-3.983;DP=548;FS=1.582;HRun=15;HaplotypeScore=96.2528;InbreedingCoeff=0.6145;MQ=66.39;MQ0=0;MQRankSum=-1.528;QD=16.29;ReadPosRankSum=3.163;VQSLOD=4.1251;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:31:64.44:0,64,1053	0/0:8,0:8:14.99:0,15,208	0/0:14,0:12:0.36:0,0,146	0/0:10,0:7:3.01:0,3,31	1/1:7,21:30:44.72:504,45,0	1/1:9,17:28:40.19:496,40,0	1/1:6,10:18:3.86:247,4,0	1/1:5,27:33:79.62:887,80,0	1/1:3,14:19:32.85:354,33,0	1/1:5,11:16:30.96:353,31,0	1/1:6,9:16:23.88:250,24,0	0/0:3,0:24:33.62:0,34,154	0/0:4,0:12:10.46:0,10,40	1/1:2,12:14:13.58:378,14,0	0/0:30,0:38:94.46:0,94,1472	1/1:11,13:25:14.51:363,15,0	1/1:5,17:25:50.85:524,51,0	1/1:1,14:15:39.09:437,39,0	0/1:6,1:20:10.35:10,0,48	0/0:5,0:13:13.72:0,14,57	0/1:7,1:21:7.72:22,0,8	0/0:1,0:19:16.33:0,16,52	0/1:5,1:20:14.90:15,0,18	0/0:2,0:12:7.48:0,7,17	1/1:6,18:24:47.93:522,48,0	0/1:6,11:17:27.24:241,0,27	0/0:3,0:13:13.10:0,13,65	1/1:4,8:12:11.59:162,12,0
chr10	49099607	.	T	TACACAC	18044.71	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-12.879;DP=671;FS=5.876;HRun=0;HaplotypeScore=133.1503;InbreedingCoeff=0.9983;MQ=64.12;MQ0=1;MQRankSum=-14.128;QD=55.18;ReadPosRankSum=0.275;VQSLOD=4.9662;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:42:99:0,108,2278	0/0:10,0:10:24.07:0,24,474	0/0:27,0:22:35.87:0,36,624	0/0:26,0:25:29.14:0,29,732	1/1:1,18:24:27.09:911,27,0	1/1:5,12:21:45.15:1348,45,0	1/1:3,20:24:45.15:1504,45,0	1/1:11,19:37:74.97:1848,75,0	1/1:16,10:26:27.36:1126,27,0	1/1:5,16:25:56.38:1649,56,0	1/1:3,14:19:30.10:1008,30,0	0/0:26,0:26:72.20:0,72,1494	0/0:26,0:26:66.18:0,66,1308	1/1:4,19:26:36.12:1216,36,0	0/0:23,0:23:63.19:0,63,1266	1/1:1,10:15:33.11:1045,33,0	1/1:10,13:27:33.11:1116,33,0	1/1:4,9:14:24.08:704,24,0	0/0:19,0:18:33.10:0,33,682	0/0:24,0:24:69.20:0,69,1427	0/0:31,0:33:66.21:0,66,1326	0/0:16,0:16:39.12:0,39,814	0/0:17,0:17:42.12:0,42,876	0/0:27,0:27:52.17:0,52,1335	1/1:3,26:33:60.20:1904,60,0	1/1:1,23:27:66.21:1956,66,0	0/0:28,0:28:75.26:0,75,1618	1/1:0,7:8:21.07:711,21,0
chr10	49100517	.	C	CAGAG	4600.03	PASS	AB=0.968;AC=29;AF=0.518;AN=56;BaseQRankSum=0.081;DP=354;FS=14.799;HRun=0;HaplotypeScore=91.0237;InbreedingCoeff=0.8019;MQ=74.57;MQ0=2;MQRankSum=-5.832;QD=26.90;ReadPosRankSum=0.985;VQSLOD=3.8450;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:26:60.13:0,60,970	0/0:7,0:6:11.98:0,12,221	0/0:39,0:23:16.11:0,16,211	0/1:28,0:17:11.88:12,0,108	1/1:2,10:12:2.77:78,3,0	1/1:0,9:9:15.05:392,15,0	1/1:6,7:13:14.94:391,15,0	1/1:10,7:17:33.02:539,33,0	1/1:1,3:4:6.02:157,6,0	1/1:4,6:10:30.03:547,30,0	1/1:4,6:10:5.11:156,5,0	0/0:11,0:11:14.92:0,15,234	0/0:8,0:8:15.05:0,15,276	1/1:1,9:10:6.02:158,6,0	0/0:13,0:13:19.06:0,19,373	1/1:3,9:12:21.07:552,21,0	1/1:6,11:16:12.04:298,12,0	1/1:0,5:5:8.98:177,9,0	0/0:22,0:20:48.14:0,48,817	0/0:7,0:7:15.52:0,16,276	0/0:14,0:14:26.99:0,27,405	0/0:6,0:6:5.88:0,6,82	0/0:5,0:5:8.86:0,9,163	0/0:11,0:11:15.04:0,15,245	1/1:3,7:10:18.88:474,19,0	1/1:2,5:7:15.04:341,15,0	0/0:13,0:13:36.04:0,36,551	1/1:0,5:5:15.05:329,15,0
chr10	49100548	.	AG	A	716.72	PASS	AB=0.970;AC=26;AF=0.542;AN=48;BaseQRankSum=1.693;DP=271;FS=15.303;HRun=4;HaplotypeScore=78.3486;InbreedingCoeff=0.5563;MQ=71.86;MQ0=9;MQRankSum=-2.305;QD=5.73;ReadPosRankSum=2.876;VQSLOD=-0.3605;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:13:14.90:0,15,122	0/0:9,0:8:5.99:0,6,59	0/0:43,0:14:19.89:0,20,203	0/1:58,2:20:13.35:13,0,140	./.	1/1:0,1:1:3.01:36,3,0	./.	1/1:5,4:9:18.04:203,18,0	1/1:2,1:3:2.49:9,2,0	1/1:1,5:6:15.04:178,15,0	0/0:2,4:4:2.60:0,3,10	1/1:4,0:6:5.81:39,6,0	1/1:2,0:5:10.55:58,11,0	./.	0/0:8,0:7:8.98:0,9,98	./.	1/1:6,3:8:12.03:131,12,0	1/1:0,1:1:3.01:35,3,0	0/0:7,0:7:15.05:0,15,201	0/0:8,0:8:9.02:0,9,102	0/0:12,0:12:20.50:0,21,187	0/1:5,0:8:4.42:4,0,25	1/1:0,0:2:2.99:23,3,0	0/0:3,0:6:2.97:0,3,20	1/1:3,3:6:3.01:35,3,0	1/1:2,0:2:5.98:49,6,0	0/0:12,0:11:30.09:0,30,374	1/1:1,2:3:6.02:71,6,0
chr10	49100551	.	G	GA	849.58	PASS	AB=0.944;AC=27;AF=0.540;AN=50;BaseQRankSum=1.067;DP=268;FS=12.440;HRun=0;HaplotypeScore=77.4537;InbreedingCoeff=0.6019;MQ=76.10;MQ0=9;MQRankSum=-3.234;QD=11.97;ReadPosRankSum=3.186;VQSLOD=3.9687;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:10:14.90:0,15,112	0/0:6,0:5:5.98:0,6,60	0/0:49,0:17:6.52:0,7,156	0/0:67,0:19:25.01:0,25,208	0/1:4,1:4:0:0,0,0	1/1:1,0:1:3.01:36,3,0	./.	1/1:6,2:7:18.06:226,18,0	1/1:2,0:2:2.49:9,2,0	1/1:6,0:6:15.05:180,15,0	0/1:5,0:3:0:0,0,0	1/1:7,0:6:5.82:40,6,0	1/1:5,0:5:11.80:79,12,0	./.	0/0:8,0:7:8.97:0,9,88	./.	1/1:4,5:8:12.04:165,12,0	1/1:1,0:1:3.01:35,3,0	0/0:5,0:5:15.04:0,15,184	0/0:6,0:6:9.02:0,9,98	0/0:10,0:10:20.76:0,21,157	0/1:8,0:8:10.88:19,0,11	1/1:2,0:2:2.99:23,3,0	0/0:8,0:6:2.96:0,3,20	1/1:4,2:6:3.01:35,3,0	1/1:2,2:3:8.24:99,8,0	0/0:12,0:11:30.09:0,30,371	1/1:2,0:2:6.02:71,6,0
chr10	49100552	.	GA	G	582.56	PASS	AB=1.000;AC=27;AF=0.540;AN=50;BaseQRankSum=2.082;DP=268;FS=31.838;HRun=1;HaplotypeScore=76.1536;InbreedingCoeff=0.5951;MQ=75.78;MQ0=10;MQRankSum=-2.246;QD=8.69;ReadPosRankSum=1.062;VQSLOD=-0.6049;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:9:3:0,3,34	0/0:6,0:5:3.01:0,3,31	0/0:53,0:17:30.22:0,30,318	0/0:70,0:19:3.55:0,4,179	0/0:5,0:4:0:0,0,0	1/1:1,0:1:2.94:18,3,0	./.	1/1:7,0:6:15.40:73,15,0	0/1:2,0:2:0:0,0,0	1/1:6,0:6:14.72:91,15,0	0/0:5,0:3:0:0,0,0	1/1:3,4:6:11.95:115,12,0	1/1:3,2:5:12.02:135,12,0	./.	0/0:8,0:7:4.29:0,4,65	./.	1/1:9,0:8:11.26:63,11,0	1/1:1,0:1:2.84:14,3,0	0/0:5,0:5:15.05:0,15,195	0/0:6,0:6:5.98:0,6,67	0/0:9,0:9:7.83:0,8,83	1/1:3,5:8:5.80:58,6,0	1/1:1,0:1:3.01:38,3,0	1/1:5,3:6:5.93:40,6,0	1/1:6,0:6:3:28,3,0	1/1:4,0:3:7.63:32,8,0	0/0:12,0:11:27.03:0,27,298	1/1:2,0:2:5.90:36,6,0
chr10	49100558	.	GT	G	1449.70	PASS	AB=0.571;AC=33;AF=0.868;AN=38;BaseQRankSum=-2.662;DP=243;FS=24.745;HRun=1;HaplotypeScore=69.1557;InbreedingCoeff=0.3179;MQ=76.56;MQ0=11;MQRankSum=-2.820;QD=16.66;ReadPosRankSum=3.076;VQSLOD=2.4575;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,8:7:3.01:41,3,0	1/1:0,5:5:3:41,3,0	0/0:54,2:17:36.17:0,36,389	0/0:67,1:18:18.82:0,19,221	./.	1/1:0,1:1:3.01:41,3,0	./.	1/1:0,3:2:6.02:83,6,0	./.	1/1:0,5:5:15.05:207,15,0	./.	1/1:0,6:6:6.02:83,6,0	1/1:1,4:5:12.04:161,12,0	./.	1/1:0,8:7:3.01:41,3,0	./.	1/1:0,8:7:12.04:165,12,0	1/1:0,1:1:3.01:40,3,0	1/1:0,2:2:6.02:83,6,0	1/1:0,4:4:3.01:42,3,0	0/1:2,6:8:16.19:18,0,16	./.	./.	./.	1/1:0,6:6:3.01:41,3,0	1/1:0,4:3:9.02:110,9,0	1/1:0,11:10:24.03:331,24,0	1/1:0,1:1:3.01:41,3,0
chr10	49100565	.	GT	G	1112.15	PASS	AB=0.985;AC=25;AF=0.893;AN=28;BaseQRankSum=-1.023;DP=214;FS=35.141;HRun=1;HaplotypeScore=66.7033;InbreedingCoeff=0.2348;MQ=72.54;MQ0=10;MQRankSum=-2.659;QD=9.59;ReadPosRankSum=3.127;VQSLOD=-0.5307;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	1/1:1,3:3:3.01:41,3,0	0/0:49,0:14:33.91:0,34,345	0/1:64,1:16:19.67:20,0,117	./.	1/1:0,1:1:3.01:41,3,0	./.	./.	./.	1/1:0,5:5:15.05:207,15,0	./.	1/1:0,6:6:6.02:83,6,0	1/1:0,4:4:12.04:163,12,0	./.	./.	./.	1/1:0,8:7:12.04:165,12,0	1/1:0,1:1:3.01:41,3,0	1/1:0,1:1:3.01:41,3,0	./.	1/1:1,6:7:2.03:6,2,0	./.	./.	./.	./.	1/1:0,3:2:6.02:82,6,0	1/1:1,9:9:21.02:282,21,0	1/1:0,1:1:3.01:41,3,0
chr10	49100703	.	G	GGC	4745.59	PASS	AB=0.914;AC=22;AF=0.393;AN=56;BaseQRankSum=-1.957;DP=462;FS=6.826;HRun=0;HaplotypeScore=81.6063;InbreedingCoeff=0.4940;MQ=47.52;MQ0=28;MQRankSum=2.123;QD=21.19;ReadPosRankSum=2.564;VQSLOD=5.1247;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:17:30.10:0,30,453	0/0:6,0:6:15.52:0,16,221	0/0:27,0:7:6.06:0,6,212	0/0:24,0:5:0.14:0,0,107	1/1:16,0:16:33.11:577,33,0	0/1:21,0:20:9.01:389,0,9	1/1:22,0:21:3.44:294,3,0	0/1:23,0:23:82.14:286,0,82	1/1:13,0:8:24.08:364,24,0	0/1:20,3:21:4.45:509,0,4	0/1:5,10:14:32.22:50,0,32	0/0:16,0:16:41.39:0,41,527	0/0:12,0:11:30.90:0,31,426	1/1:9,0:7:11.69:158,12,0	0/0:9,0:9:27.07:0,27,371	1/1:11,0:11:24.08:389,24,0	1/1:19,0:16:23.53:416,24,0	1/1:12,1:12:30.84:472,31,0	0/0:15,0:12:27.56:0,28,382	0/0:20,0:20:57.15:0,57,810	0/0:16,0:15:15.13:0,15,207	0/0:20,0:18:36.98:0,37,494	0/0:17,0:17:30.55:0,31,421	0/0:19,0:18:11.81:0,12,172	0/1:11,0:11:19.43:236,0,19	0/1:10,0:10:0.82:300,0,1	0/0:19,0:19:54.16:0,54,759	1/1:18,0:14:0.44:305,0,0
chr10	49102071	.	CA	C	14343.75	PASS	AB=0.857;AC=29;AF=0.518;AN=56;BaseQRankSum=14.406;DP=697;FS=0.000;HRun=1;HaplotypeScore=68.7388;InbreedingCoeff=0.9288;MQ=85.67;MQ0=0;MQRankSum=-3.776;QD=39.73;ReadPosRankSum=0.674;VQSLOD=5.3452;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,150,2370	0/1:5,1:6:23.90:24,0,222	0/0:27,0:27:54.64:0,55,1126	0/0:16,0:16:48.08:0,48,668	1/1:1,33:34:96.32:1332,96,0	1/1:0,21:21:60.20:839,60,0	1/1:0,20:20:57.19:797,57,0	1/1:0,24:24:72.21:956,72,0	1/1:0,24:24:72.24:1007,72,0	1/1:0,27:27:81.27:1130,81,0	1/1:0,33:33:87.29:1217,87,0	0/0:17,0:17:51.17:0,51,815	0/0:26,0:26:78.27:0,78,1247	1/1:0,19:19:54.18:754,54,0	0/0:35,0:35:99:0,105,1673	1/1:0,38:38:99:1469,105,0	1/1:0,26:26:78.26:1091,78,0	1/1:0,18:18:54.18:752,54,0	0/0:18,0:18:54.18:0,54,862	0/0:29,0:29:87.30:0,87,1391	0/0:29,0:29:87.30:0,87,1391	0/0:20,0:20:60.20:0,60,958	0/0:25,0:25:75.24:0,75,1176	0/0:22,0:22:66.20:0,66,1027	1/1:0,22:22:66.22:923,66,0	1/1:0,35:35:99:1467,105,0	0/0:21,0:21:63.21:0,63,1003	1/1:0,14:14:42.14:587,42,0
chr10	49105127	.	G	GC	956.59	PASS	AB=1.000;AC=21;AF=0.389;AN=54;BaseQRankSum=-2.914;DP=322;FS=28.717;HRun=8;HaplotypeScore=52.0197;InbreedingCoeff=0.7512;MQ=85.10;MQ0=1;MQRankSum=-2.178;QD=10.29;ReadPosRankSum=1.282;VQSLOD=0.4283;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:51.49:0,51,467	0/0:11,0:11:20.99:0,21,187	0/0:31,0:26:62.95:0,63,560	0/0:22,0:20:14.98:0,15,197	0/1:1,0:1:0:0,0,0	1/1:1,12:13:27.07:302,27,0	1/1:5,16:21:30.56:347,31,0	1/1:8,0:7:1.55:4,2,0	1/1:3,9:12:11.99:124,12,0	1/1:3,0:3:5.10:22,5,0	0/0:3,0:3:4.82:0,5,17	0/0:8,0:8:18:0,18,165	0/0:16,0:16:33.96:0,34,302	1/1:5,0:5:0.93:2,1,0	0/0:18,0:18:39.01:0,39,357	1/1:3,11:14:24.07:277,24,0	1/1:6,0:6:2.55:23,3,0	1/1:6,0:6:4.79:24,5,0	0/0:12,0:12:23.96:0,24,207	0/0:7,0:7:7.90:0,8,99	0/0:19,0:19:32.96:0,33,287	0/0:15,0:15:20.73:0,21,191	0/0:10,0:10:15.01:0,15,136	0/0:13,0:13:15:0,15,137	1/1:4,0:4:0.47:1,0,0	0/0:1,0:1:0.47:0,0,1	0/0:20,0:20:46.57:0,47,414	./.
chr10	49105464	.	A	AGT	12470.56	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-5.853;DP=758;FS=0.291;HRun=0;HaplotypeScore=91.0718;InbreedingCoeff=0.9984;MQ=90.03;MQ0=0;MQRankSum=-2.645;QD=53.52;ReadPosRankSum=1.295;VQSLOD=5.2161;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,156,2343	0/0:10,0:10:27.09:0,27,413	0/0:30,0:30:87.29:0,87,1289	0/0:28,0:28:78.26:0,78,1175	1/1:0,18:18:48.16:927,48,0	0/0:21,0:21:63.21:0,63,964	0/0:33,0:33:96.33:0,96,1467	1/1:1,40:41:99:2229,117,0	0/0:38,0:38:99:0,108,1654	1/1:1,25:26:78.27:1499,78,0	1/1:0,9:10:18.06:347,18,0	0/0:37,0:37:99:0,111,1679	0/0:30,0:30:90.26:0,90,1328	1/1:1,35:36:99:1970,102,0	0/0:35,0:35:99:0,99,1470	0/0:28,0:28:84.29:0,84,1284	1/1:2,28:30:84.29:1615,84,0	1/1:0,18:18:51.17:985,51,0	0/0:21,0:21:63.21:0,63,947	0/0:20,0:20:60.20:0,60,918	0/0:43,0:43:99:0,123,1878	0/0:20,0:20:57.18:0,57,842	0/0:13,0:13:39.13:0,39,597	0/0:34,0:34:99:0,99,1490	1/1:1,10:12:27.09:522,27,0	1/1:1,31:32:93.32:1797,93,0	0/0:30,0:29:90.31:0,90,1373	1/1:0,10:10:30.10:579,30,0
chr10	49106290	.	A	ACAGAGTGAGTAGTGAGGAAAAGG	22978.55	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=1.872;DP=407;FS=0.970;HRun=0;HaplotypeScore=224.8267;InbreedingCoeff=0.9014;MQ=63.90;MQ0=14;MQRankSum=-10.873;QD=129.82;ReadPosRankSum=0.206;VQSLOD=4.0539;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:69.19:0,69,3510	0/0:4,0:4:9.03:0,9,427	0/0:53,0:28:69.10:0,69,3069	0/0:43,0:22:57.40:0,57,2545	1/1:15,0:15:21.07:1306,21,0	0/0:14,0:13:28.91:0,29,1310	0/0:20,0:19:26.96:0,27,1486	1/1:28,0:26:63.17:3941,63,0	0/0:13,0:13:15.04:0,15,483	1/1:9,0:9:24.07:1726,24,0	1/1:3,0:3:9.03:541,9,0	1/1:14,3:18:36.12:2721,36,0	1/1:6,0:6:15.05:1164,15,0	1/1:8,0:8:18.06:1210,18,0	0/0:17,0:17:48.16:0,48,2721	0/0:12,0:11:21.07:0,21,951	1/1:11,0:11:24.08:1873,24,0	1/1:1,0:1:3.01:65,3,0	0/0:10,0:10:27.09:0,27,1013	0/0:8,0:8:12.04:0,12,661	0/0:6,0:6:12.02:0,12,468	1/1:18,2:20:39.20:2096,39,0	1/1:18,1:18:25.04:1189,25,0	1/1:11,0:11:12.01:286,12,0	1/1:15,0:15:39.13:2654,39,0	1/1:9,0:9:27.09:2180,27,0	0/0:2,0:2:6.02:0,6,375	1/1:3,0:3:3:26,3,0
chr10	49106295	.	G	GTGAGTAGTGAGGAAAAGGCAGAGTC	25102.87	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=0.213;DP=406;FS=0.000;HRun=0;HaplotypeScore=221.8183;InbreedingCoeff=0.9068;MQ=59.92;MQ0=16;MQRankSum=-10.963;QD=139.46;ReadPosRankSum=-1.617;VQSLOD=4.0808;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:72.06:0,72,3951	0/0:4,0:4:9.03:0,9,499	0/0:52,0:25:69.20:0,69,3453	0/0:44,0:22:46:0,46,2786	1/1:9,2:14:21.06:1306,21,0	0/0:14,0:13:29.13:0,29,1387	0/0:19,0:18:26.24:0,26,1548	1/1:26,0:24:62.24:4191,62,0	0/0:10,0:10:15.04:0,15,526	1/1:6,1:11:33.10:2551,33,0	1/1:1,1:3:9.03:541,9,0	1/1:16,0:16:36.12:2681,36,0	1/1:6,0:6:15.05:1148,15,0	1/1:3,3:9:18.06:1210,18,0	0/0:18,0:18:48.16:0,48,3035	0/0:12,0:10:21.07:0,21,1021	1/1:7,1:11:24.08:1929,24,0	1/1:1,0:1:3.01:65,3,0	0/0:10,0:10:27.56:0,28,1147	0/0:8,0:8:12.04:0,12,682	0/0:4,0:4:12.02:0,12,485	1/1:19,0:18:39.20:2073,39,0	1/1:20,0:19:25.04:1196,25,0	1/1:10,0:10:12.01:286,12,0	1/1:14,1:21:39.13:2658,39,0	1/1:6,3:12:36.12:3230,36,0	0/0:3,0:3:8.24:0,8,417	1/1:1,0:1:3.01:39,3,0
chr10	49106385	.	GAA	G	2101.60	PASS	AB=1.000;AC=22;AF=0.393;AN=56;BaseQRankSum=-1.193;DP=461;FS=9.019;HRun=3;HaplotypeScore=87.1744;InbreedingCoeff=0.7625;MQ=57.63;MQ0=19;MQRankSum=3.163;QD=13.56;ReadPosRankSum=-0.155;VQSLOD=-0.1355;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:32.80:0,33,493	0/0:7,0:7:0.38:0,0,96	0/1:29,0:14:9.47:9,0,108	0/0:38,0:12:9.60:0,10,120	1/1:12,0:11:23.96:196,24,0	0/0:31,0:30:7.45:0,7,284	0/0:19,0:17:10.76:0,11,155	1/1:19,0:19:53.89:461,54,0	0/0:18,0:16:28.33:0,28,195	1/1:0,15:15:44.84:358,45,0	1/1:4,0:3:5.99:50,6,0	0/0:17,0:17:41.29:0,41,340	0/0:15,0:14:16.57:0,17,241	1/1:16,0:16:32.91:267,33,0	0/0:21,0:21:31.57:0,32,369	0/0:24,0:22:51.36:0,51,398	1/1:9,0:9:24.30:179,24,0	1/1:7,0:5:14.91:111,15,0	0/1:12,0:12:7.85:8,0,148	0/0:8,0:8:10.52:0,11,86	0/0:23,0:23:41.13:0,41,327	0/0:16,0:12:22.73:0,23,173	0/0:11,0:11:26.46:0,26,202	0/0:17,0:16:5.02:0,5,210	1/1:13,0:13:32.24:272,32,0	1/1:9,0:9:26.90:222,27,0	0/0:12,0:12:24.29:0,24,188	1/1:10,0:9:13.99:177,14,0
chr10	49107533	.	GGTGTGTGTGT	G	294.03	PASS	AC=6;AF=0.120;AN=50;BaseQRankSum=1.538;DP=532;FS=2.283;HRun=0;HaplotypeScore=144.0628;InbreedingCoeff=0.6095;MQ=66.10;MQ0=22;MQRankSum=-0.889;QD=6.26;ReadPosRankSum=1.784;VQSLOD=2.3613;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:22:5.43:0,5,88	0/0:6,0:6:6.02:0,6,192	./.	./.	0/0:16,0:16:15.05:0,15,473	0/0:20,0:20:30:0,30,1056	0/0:19,0:19:9.03:0,9,297	0/0:27,0:27:13.60:0,14,296	0/0:24,0:22:15.05:0,15,600	0/0:19,0:18:18.05:0,18,422	0/0:17,0:16:6.02:0,6,241	1/1:11,9:19:2.37:85,2,0	1/1:10,2:12:6.02:153,6,0	0/0:25,0:24:21.04:0,21,620	0/0:17,0:17:15.52:0,16,406	0/0:22,0:22:29.63:0,30,1198	0/0:12,0:10:12.04:0,12,388	0/0:13,0:12:21.07:0,21,766	0/0:17,0:16:13.56:0,14,355	0/0:14,0:14:6.02:0,6,244	0/0:24,0:18:6.02:0,6,184	1/1:13,0:14:6.02:166,6,0	0/0:12,0:16:0.47:0,0,1	./.	0/0:18,0:17:15.05:0,15,543	0/0:30,0:29:42.39:0,42,1368	0/0:21,0:18:27.56:0,28,792	0/0:13,0:12:27.04:0,27,821
chr10	49107581	.	TGAGAGAGAGAGAGAGAGAGA	T	3109.34	PASS	AB=0.866;AC=20;AF=0.417;AN=48;BaseQRankSum=5.587;DP=463;FS=16.831;HRun=0;HaplotypeScore=171.2094;InbreedingCoeff=0.2093;MQ=38.08;MQ0=60;MQRankSum=-3.841;QD=12.44;ReadPosRankSum=1.041;VQSLOD=1.8553;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:16:12.51:0,13,636	0/0:8,0:8:11.91:0,12,557	./.	./.	./.	0/1:19,0:23:51.73:186,0,52	1/1:12,0:12:1.05:90,1,0	0/0:22,0:21:0:0,0,0	0/1:16,0:16:70.99:118,0,71	1/1:12,8:17:17.97:683,18,0	./.	0/0:23,0:20:15.04:0,15,1075	0/0:12,0:11:23.29:0,23,1068	0/1:19,4:20:12.41:151,0,12	0/0:12,0:12:3.01:0,3,233	1/1:12,2:21:1.16:2,1,0	0/0:16,0:10:0.47:0,0,1	0/1:17,0:13:11.63:152,0,12	1/1:9,2:9:5.99:317,6,0	0/0:8,0:7:3.63:0,4,11	1/1:17,0:11:3.01:92,3,0	0/0:22,0:20:5.86:0,6,296	0/0:21,0:20:9.03:0,9,544	0/0:24,0:19:30.10:0,30,2342	1/1:10,8:18:1.55:4,2,0	1/1:17,7:21:18.04:948,18,0	0/1:14,5:16:45.32:307,0,45	0/1:13,0:11:49.28:204,0,49
chr10	49108102	.	ACCTCAGCCCTCT	A	18703.61	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=17.292;DP=760;FS=12.009;HRun=0;HaplotypeScore=269.7154;InbreedingCoeff=0.9747;MQ=78.00;MQ0=0;MQRankSum=-16.603;QD=49.61;ReadPosRankSum=0.886;VQSLOD=2.6599;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:60,0:60:99:0,135,7471	0/0:13,0:13:30.10:0,30,1633	0/0:28,0:27:54.12:0,54,2213	0/0:22,0:22:33.11:0,33,1113	1/1:7,25:32:60.21:1954,60,0	0/0:21,0:21:51.18:0,51,2987	0/0:31,0:31:72.25:0,72,3837	1/1:19,9:28:26.90:527,27,0	0/0:25,0:25:60.21:0,60,3454	1/1:9,15:24:39.06:1130,39,0	1/1:9,16:25:42.14:1452,42,0	1/1:6,25:31:66.23:2333,66,0	1/1:9,17:26:42.14:1485,42,0	1/1:4,20:24:51.18:1803,51,0	0/0:22,0:22:45.14:0,45,2398	0/0:24,0:24:66.23:0,66,3873	1/1:17,19:36:24.08:849,24,0	1/1:1,9:10:9.03:318,9,0	0/0:31,0:31:69.24:0,69,3783	0/0:31,0:31:78.25:0,78,4321	0/0:45,0:45:99:0,111,6200	1/1:9,16:25:39.09:1261,39,0	1/1:13,21:34:54.14:1761,54,0	1/1:11,12:23:15.05:502,15,0	1/1:2,9:11:23.94:848,24,0	1/1:12,26:38:72.21:2300,72,0	0/0:30,0:30:84.29:0,84,4985	1/1:7,3:10:6.02:182,6,0
chr10	49109014	.	A	AT	8779.20	PASS	AB=1.000;AC=39;AF=0.696;AN=56;BaseQRankSum=3.088;DP=453;FS=1.820;HRun=8;HaplotypeScore=107.3837;InbreedingCoeff=0.9166;MQ=67.19;MQ0=0;MQRankSum=-8.454;QD=27.96;ReadPosRankSum=-1.249;VQSLOD=3.6998;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:25:62.07:0,62,555	0/0:6,0:6:18.01:0,18,165	0/0:13,0:13:8.18:0,8,118	0/1:9,0:9:2.02:2,0,66	1/1:7,26:33:31.58:807,32,0	0/0:29,0:29:72:0,72,648	0/0:11,0:11:27.01:0,27,247	1/1:5,12:17:48.11:540,48,0	0/0:17,0:17:45:0,45,404	1/1:4,15:19:48.13:541,48,0	1/1:2,17:19:51.14:579,51,0	1/1:5,16:21:51.14:580,51,0	1/1:2,10:12:33.06:366,33,0	1/1:4,6:10:27.02:279,27,0	0/0:20,0:20:54.02:0,54,494	0/0:16,0:16:42.01:0,42,380	1/1:5,18:23:63.17:713,63,0	1/1:4,8:12:30.06:325,30,0	1/1:0,9:9:27.08:311,27,0	1/1:4,28:33:90.05:991,90,0	1/1:4,2:6:9.01:94,9,0	1/1:3,11:14:33.09:370,33,0	1/1:3,10:13:36.07:400,36,0	1/1:0,9:9:21.06:242,21,0	1/1:1,8:9:27.05:298,27,0	1/1:5,17:22:54.15:615,54,0	1/1:2,18:20:54.16:623,54,0	1/1:2,2:4:9.03:104,9,0
chr10	49109049	.	TGG	T	14961.07	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=10.890;DP=462;FS=0.000;HRun=3;HaplotypeScore=122.1396;InbreedingCoeff=0.9764;MQ=79.76;MQ0=0;MQRankSum=-10.054;QD=40.22;ReadPosRankSum=1.596;VQSLOD=4.2801;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:72.16:0,72,1315	0/0:7,0:7:21.06:0,21,357	0/0:17,0:16:36.11:0,36,657	0/0:20,0:20:45.03:0,45,893	1/1:0,24:24:57.19:861,57,0	1/1:1,35:36:90.31:1377,90,0	1/1:0,8:8:24.08:367,24,0	1/1:1,24:25:72.23:1076,72,0	1/1:0,14:14:33.11:505,33,0	1/1:0,20:20:60.20:918,60,0	1/1:0,24:24:63.21:962,63,0	1/1:2,11:13:36.11:528,36,0	1/1:3,6:9:24.07:344,24,0	1/1:1,8:9:21.07:321,21,0	0/0:20,0:20:60.19:0,60,1120	1/1:0,21:21:57.19:861,57,0	1/1:0,16:16:39.13:588,39,0	1/1:0,12:12:33.11:505,33,0	1/1:1,11:12:33.09:464,33,0	1/1:1,31:32:84.29:1283,84,0	1/1:1,4:5:9.03:138,9,0	1/1:2,13:15:42.14:639,42,0	1/1:0,15:15:39.13:595,39,0	1/1:0,13:13:33.11:496,33,0	1/1:1,11:12:33.11:504,33,0	1/1:0,15:15:45.14:666,45,0	1/1:1,17:18:51.17:779,51,0	1/1:0,4:4:12.04:184,12,0
chr10	49109801	.	AT	A	2814.86	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=12.181;DP=591;FS=0.439;HRun=3;HaplotypeScore=65.0231;InbreedingCoeff=0.9817;MQ=81.55;MQ0=0;MQRankSum=0.332;QD=33.51;ReadPosRankSum=1.164;VQSLOD=4.0843;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:78.22:0,78,1081	0/0:6,0:6:18.05:0,18,241	0/0:14,0:14:39.13:0,39,534	0/0:18,0:18:48.02:0,48,622	0/0:17,0:17:48.16:0,48,691	1/1:0,29:29:84.26:1041,84,0	1/1:0,19:19:51.16:632,51,0	0/0:52,0:52:99:0,153,2142	1/1:0,16:16:48.15:595,48,0	0/0:23,0:23:69.21:0,69,973	0/0:20,0:20:57.19:0,57,820	0/0:21,0:21:63.21:0,63,905	0/0:26,0:26:72.23:0,72,1017	0/0:16,0:16:45.13:0,45,627	0/0:22,0:22:66.21:0,66,932	1/1:1,19:20:57.18:706,57,0	0/0:24,0:24:72.24:0,72,1036	0/0:28,0:28:78.20:0,78,1081	0/0:36,0:36:96.29:0,96,1314	0/0:18,0:18:54.17:0,54,760	0/0:23,0:23:66.22:0,66,950	0/0:19,0:19:57.19:0,57,821	0/0:13,0:13:39.13:0,39,561	0/0:16,0:16:48.15:0,48,674	0/0:12,0:12:33.07:0,33,452	0/0:20,0:20:60.19:0,60,847	0/0:31,0:30:90.29:0,90,1278	0/0:4,0:4:9.03:0,9,130
chr10	49110080	.	TATC	T	8130.59	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=10.410;DP=558;FS=0.340;HRun=0;HaplotypeScore=97.4361;InbreedingCoeff=0.9911;MQ=87.34;MQ0=0;MQRankSum=-9.964;QD=47.27;ReadPosRankSum=-2.096;VQSLOD=6.1344;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,126,2925	0/0:9,0:9:27.06:0,27,524	0/0:27,0:27:67.56:0,68,1698	0/0:26,0:26:75.26:0,75,1654	1/1:4,21:25:63.18:992,63,0	0/0:25,0:25:75.24:0,75,1701	0/0:18,0:18:54.19:0,54,1273	1/1:0,17:17:51.16:862,51,0	0/0:15,0:15:45.14:0,45,1018	1/1:1,19:20:60.14:993,60,0	1/1:2,13:15:45.15:784,45,0	0/0:15,0:15:42.14:0,42,935	0/0:18,0:18:54.17:0,54,1208	1/1:2,14:16:48.10:798,48,0	0/0:11,0:11:33.11:0,33,780	0/0:18,0:18:54.19:0,54,1207	1/1:4,20:24:63.21:1072,63,0	1/1:4,16:20:51.15:838,51,0	0/0:19,0:19:54.18:0,54,1183	0/0:24,0:24:72.23:0,72,1631	0/0:32,0:32:96.33:0,96,2269	0/0:18,0:18:51.18:0,51,1203	0/0:18,0:18:51.65:0,52,1206	0/0:23,0:23:69.24:0,69,1629	1/1:1,14:15:45.15:760,45,0	1/1:1,16:17:51.16:872,51,0	0/0:27,0:26:81.23:0,81,1838	1/1:1,2:3:9.03:159,9,0
chr10	49110146	.	C	CA	10545.81	PASS	AB=1.000;AC=31;AF=0.554;AN=56;BaseQRankSum=10.803;DP=650;FS=2.112;HRun=5;HaplotypeScore=144.3976;InbreedingCoeff=0.9395;MQ=75.42;MQ0=0;MQRankSum=-6.027;QD=30.48;ReadPosRankSum=0.666;VQSLOD=2.7821;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,123,1296	0/0:7,0:7:21.05:0,21,226	0/0:30,0:30:14.23:0,14,514	0/0:24,0:24:55.23:0,55,532	1/1:3,26:29:75.17:938,75,0	0/0:13,0:13:36.09:0,36,387	0/0:21,0:21:57.14:0,57,612	1/1:7,28:33:84.25:1064,84,0	0/0:22,0:22:66.17:0,66,709	1/1:6,31:37:93.28:1191,93,0	1/1:1,15:16:45.06:546,45,0	1/1:1,16:17:45.15:585,45,0	1/1:0,12:12:36.12:469,36,0	1/1:1,18:19:48.16:624,48,0	0/0:21,0:21:63.16:0,63,677	0/0:26,0:26:72.18:0,72,774	1/1:5,19:24:60.18:763,60,0	1/1:2,26:28:78.21:990,78,0	0/0:28,0:28:34.35:0,34,234	0/1:25,0:25:5.43:5,0,234	0/0:45,0:45:63.13:0,63,456	1/1:1,13:14:36.12:468,36,0	1/1:2,14:16:45.14:575,45,0	1/1:3,21:24:60.17:765,60,0	1/1:2,18:20:54.11:680,54,0	1/1:6,17:23:51.15:647,51,0	0/0:22,0:22:55.07:0,55,280	1/1:0,7:7:18.06:234,18,0
chr10	49110291	.	GTC	G	19826.57	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=11.096;DP=666;FS=21.370;HRun=0;HaplotypeScore=109.7243;InbreedingCoeff=0.9999;MQ=90.63;MQ0=2;MQRankSum=-5.942;QD=46.22;ReadPosRankSum=2.705;VQSLOD=4.0244;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,126,2504	0/0:15,0:15:45.15:0,45,914	0/0:27,0:27:72.18:0,72,1201	0/0:26,0:26:63.08:0,63,1171	1/1:0,25:25:72.25:1174,72,0	0/0:20,0:20:60.21:0,60,1218	0/0:22,0:22:66.21:0,66,1303	1/1:0,33:33:99:1543,99,0	0/0:28,0:28:84.27:0,84,1635	1/1:0,32:32:96.31:1537,96,0	1/1:0,12:12:36.12:580,36,0	1/1:0,17:16:45.15:734,45,0	1/1:0,17:17:48.16:782,48,0	1/1:0,28:28:78.27:1269,78,0	0/0:27,0:27:81.28:0,81,1644	0/0:30,0:30:90.29:0,90,1777	1/1:0,25:25:69.24:1125,69,0	1/1:0,17:17:48.16:782,48,0	1/1:0,27:27:81.21:1218,81,0	1/1:0,12:12:33.11:528,33,0	1/1:0,31:31:87.30:1419,87,0	1/1:0,24:23:69.24:1124,69,0	1/1:0,21:21:60.20:978,60,0	1/1:0,27:27:72.25:1174,72,0	1/1:0,17:17:48.16:782,48,0	1/1:0,27:27:81.28:1318,81,0	1/1:0,24:24:69.24:1123,69,0	1/1:0,13:13:39.13:636,39,0
chr10	49111807	.	T	TA	3765.49	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-0.511;DP=672;FS=5.219;HRun=1;HaplotypeScore=97.5116;InbreedingCoeff=0.9991;MQ=84.97;MQ0=0;MQRankSum=-0.634;QD=39.64;ReadPosRankSum=0.828;VQSLOD=3.8737;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,132,1670	0/0:9,0:9:27.09:0,27,349	0/0:25,0:25:75.12:0,75,873	0/0:18,0:18:51.09:0,51,602	0/0:30,0:30:90.25:0,90,1125	0/0:18,0:18:54.18:0,54,699	0/0:17,0:17:51.16:0,51,646	0/0:36,0:36:99:0,102,1233	0/0:33,0:33:99:0,99,1239	0/0:25,0:25:69.21:0,69,869	0/0:13,0:13:36.11:0,36,456	0/0:28,0:28:78.24:0,78,994	0/0:20,0:20:60.16:0,60,745	0/0:26,0:26:72.18:0,72,897	0/0:34,0:34:99:0,99,1284	0/0:34,0:34:99:0,102,1323	0/0:26,0:26:75.15:0,75,933	0/0:14,0:14:42.12:0,42,528	1/1:5,16:20:57.18:823,57,0	1/1:0,21:21:63.12:883,63,0	1/1:1,22:22:63.21:932,63,0	0/0:28,0:28:81.17:0,81,1016	0/0:23,0:23:66.19:0,66,827	0/0:31,0:31:87.20:0,87,1088	0/0:14,0:14:42.14:0,42,544	0/0:20,0:20:54.16:0,54,683	1/1:1,29:30:78.21:1127,78,0	0/0:8,0:8:24.06:0,24,295
chr10	49111937	.	T	TC	15444.19	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=9.617;DP=642;FS=5.377;HRun=2;HaplotypeScore=132.5539;InbreedingCoeff=0.9991;MQ=88.30;MQ0=0;MQRankSum=-7.559;QD=37.49;ReadPosRankSum=1.461;VQSLOD=4.0208;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,111,1343	0/0:14,0:14:42.13:0,42,520	0/0:33,0:32:78.20:0,78,923	0/0:24,0:25:59.96:0,60,664	1/1:3,20:23:54.18:760,54,0	0/0:23,0:23:66.21:0,66,818	0/0:19,0:19:54.17:0,54,669	1/1:4,34:38:99:1413,102,0	0/0:20,0:20:60.18:0,60,731	1/1:1,25:26:72.24:1035,72,0	1/1:4,18:22:54.18:776,54,0	1/1:1,23:24:69.19:963,69,0	1/1:3,12:15:41.95:522,42,0	1/1:0,25:25:75.12:1028,75,0	0/0:25,0:25:72.23:0,72,892	0/0:29,0:28:87.27:0,87,1077	1/1:6,23:29:69.23:993,69,0	1/1:2,9:11:27.09:388,27,0	1/1:2,21:23:63.18:869,63,0	1/1:1,17:18:51.10:703,51,0	1/1:1,25:26:72.17:1006,72,0	1/1:2,27:29:77.94:1013,78,0	1/1:0,14:14:42.01:554,42,0	1/1:4,12:16:33.11:475,33,0	1/1:0,13:13:39.13:561,39,0	1/1:3,23:26:78.21:1078,78,0	1/1:2,25:27:72.24:1030,72,0	1/1:0,7:7:21.02:278,21,0
chr10	49111985	.	A	ATC	17770.76	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=14.987;DP=590;FS=0.326;HRun=0;HaplotypeScore=166.5447;InbreedingCoeff=0.9935;MQ=66.26;MQ0=0;MQRankSum=-15.130;QD=45.68;ReadPosRankSum=-2.594;VQSLOD=4.2593;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,126,1928	0/0:19,0:19:54.16:0,54,834	0/0:15,0:15:19.57:0,20,444	0/0:12,0:12:26.87:0,27,365	1/1:6,12:18:42.03:761,42,0	0/0:21,0:21:63.21:0,63,998	0/0:19,0:19:57.15:0,57,854	1/1:19,20:39:99:1726,114,0	0/0:25,0:25:75.26:0,75,1210	1/1:5,22:27:75.20:1400,75,0	1/1:6,19:25:63.17:1151,63,0	1/1:5,14:19:56.92:928,57,0	1/1:2,16:18:51.16:979,51,0	1/1:6,16:23:60.19:1057,60,0	0/0:23,0:23:69.22:0,69,1078	0/0:25,0:24:72.23:0,72,1143	1/1:3,13:16:48.06:831,48,0	1/1:1,7:8:24.01:404,24,0	1/1:5,13:19:51.12:906,51,0	1/1:4,22:26:66.16:1203,66,0	1/1:9,7:16:30.08:497,30,0	1/1:6,18:25:57.17:1048,57,0	1/1:2,12:15:33.04:590,33,0	1/1:7,8:15:29.96:414,30,0	1/1:2,15:17:48.15:896,48,0	1/1:6,25:31:93.29:1706,93,0	1/1:9,15:26:65.99:1075,66,0	1/1:2,3:5:12:200,12,0
chr10	49114064	.	G	GA	2062.77	PASS	AB=0.900;AC=9;AF=0.161;AN=56;BaseQRankSum=-4.902;DP=472;FS=4.428;HRun=8;HaplotypeScore=50.0996;InbreedingCoeff=0.8612;MQ=65.48;MQ0=0;MQRankSum=1.242;QD=23.99;ReadPosRankSum=-1.707;VQSLOD=3.6488;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:50.99:0,51,461	0/0:8,0:8:21.01:0,21,192	0/1:8,1:7:9.44:9,0,22	0/0:7,0:5:9.70:0,10,99	0/0:19,0:19:51.03:0,51,467	0/0:20,0:20:54.03:0,54,494	0/0:7,0:7:18.01:0,18,165	0/0:34,0:34:81:0,81,727	0/0:18,0:18:54.03:0,54,494	0/0:34,0:34:93.04:0,93,851	0/0:24,0:24:54:0,54,490	0/0:11,0:11:33.02:0,33,302	0/0:9,0:9:24.01:0,24,220	0/0:15,0:15:36.01:0,36,329	0/0:14,0:14:42.02:0,42,384	0/0:20,0:20:54:0,54,489	0/0:21,0:21:57.03:0,57,522	0/0:21,0:21:45.01:0,45,408	1/1:1,21:22:63.18:721,63,0	1/1:3,18:21:57.11:631,57,0	1/1:3,14:17:33.10:381,33,0	0/0:12,0:12:33.01:0,33,302	0/0:12,0:12:33.02:0,33,302	0/0:5,0:5:14.99:0,15,132	0/0:30,0:30:72.03:0,72,659	0/0:17,0:17:48.03:0,48,439	1/1:1,16:17:42.12:485,42,0	0/0:8,0:8:24.01:0,24,220
chr10	49114887	.	ATGTG	A	5060.34	PASS	AB=0.781;AC=45;AF=0.833;AN=54;BaseQRankSum=4.290;DP=709;FS=1.728;HRun=0;HaplotypeScore=213.1707;InbreedingCoeff=0.2773;MQ=56.43;MQ0=8;MQRankSum=-2.670;QD=7.98;ReadPosRankSum=1.401;VQSLOD=4.2209;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:30,32:65:71.85:1110,72,0	0/0:11,0:11:15.05:0,15,319	0/1:25,0:12:0:0,0,0	./.	1/1:11,0:25:8.66:52,9,0	1/1:8,0:19:12.14:100,12,0	1/1:15,0:20:8.10:34,8,0	1/1:23,0:23:2.99:23,3,0	1/1:8,0:18:14.37:151,14,0	1/1:18,0:28:23.90:211,24,0	1/1:6,0:15:5.95:56,6,0	1/1:9,17:28:38.91:557,39,0	1/1:13,15:29:36.12:553,36,0	1/1:10,0:18:15.02:140,15,0	0/0:17,0:21:38.45:0,38,732	1/1:11,0:22:17.63:138,18,0	1/1:9,0:19:8.94:84,9,0	0/1:14,0:20:41.79:116,0,42	0/1:14,0:19:18.33:97,0,18	1/1:9,0:25:15.49:141,15,0	0/1:36,0:56:22.16:22,0,26	1/1:5,6:12:6.02:96,6,0	1/1:17,12:29:18.06:287,18,0	0/1:14,19:34:24.76:604,0,25	1/1:16,0:25:16.83:145,17,0	1/1:16,0:24:2.56:179,3,0	1/1:10,0:25:12.01:112,12,0	1/1:5,0:7:6.01:56,6,0
chr10	49115142	.	GAT	G	14312.30	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=16.261;DP=599;FS=13.440;HRun=0;HaplotypeScore=108.8474;InbreedingCoeff=0.9901;MQ=76.92;MQ0=1;MQRankSum=-1.790;QD=34.40;ReadPosRankSum=0.560;VQSLOD=6.5119;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,123,2044	0/0:11,0:11:33.11:0,33,585	0/0:16,0:16:39.11:0,39,632	0/0:9,0:9:12.01:0,12,174	1/1:3,25:28:63.21:855,63,0	0/0:18,0:18:45.15:0,45,778	0/0:23,0:23:63.22:0,63,1112	1/1:3,30:33:90.28:1206,90,0	0/0:19,0:19:57.20:0,57,1011	1/1:3,27:30:75.25:1030,75,0	1/1:2,18:20:51.13:679,51,0	1/1:0,19:20:57.19:783,57,0	1/1:1,22:23:54.18:736,54,0	1/1:0,20:20:57.19:783,57,0	0/0:19,0:19:54.17:0,54,930	0/0:19,0:19:54.17:0,54,930	1/1:0,5:5:15.05:206,15,0	1/1:2,15:17:39.13:535,39,0	1/1:2,21:23:60.10:737,60,0	1/1:4,26:30:69.19:926,69,0	1/1:0,17:17:42.14:572,42,0	1/1:1,21:21:57.10:740,57,0	1/1:1,35:36:96.18:1313,96,0	1/1:1,21:22:54.18:742,54,0	1/1:1,21:22:51.17:701,51,0	1/1:1,21:22:63.21:865,63,0	1/1:0,18:18:51.17:700,51,0	1/1:2,6:8:15.05:206,15,0
chr10	49116232	.	TAGATCAACCA	T	5718.29	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=10.731;DP=549;FS=1.130;HRun=0;HaplotypeScore=172.1350;InbreedingCoeff=0.9984;MQ=90.09;MQ0=0;MQRankSum=-12.128;QD=79.42;ReadPosRankSum=0.814;VQSLOD=4.6868;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:34:99:0,102,5114	0/0:11,0:11:33.11:0,33,1540	0/0:18,0:18:54.19:0,54,2653	0/0:31,0:31:87.30:0,87,3441	0/0:18,0:18:54.17:0,54,2697	1/1:0,14:14:39.13:1283,39,0	1/1:4,12:15:27.09:895,27,0	0/0:32,0:32:93.32:0,93,4292	1/1:0,16:16:45.15:1504,45,0	0/0:16,0:16:48.16:0,48,2297	0/0:10,0:10:27.09:0,27,1353	0/0:24,0:24:69.24:0,69,3404	0/0:20,0:20:60.21:0,60,3038	0/0:18,0:18:51.18:0,51,2673	0/0:19,0:19:57.20:0,57,2900	1/1:2,24:26:60.21:2036,60,0	0/0:26,0:26:75.26:0,75,3761	0/0:12,0:12:33.07:0,33,1560	0/0:18,0:18:54.18:0,54,2383	0/0:9,0:9:27.09:0,27,1340	0/0:39,0:39:99:0,114,5761	0/0:15,0:15:45.15:0,45,2334	0/0:18,0:18:51.18:0,51,2520	0/0:19,0:19:51.18:0,51,2750	0/0:16,0:16:48.16:0,48,2507	0/0:24,0:24:69.24:0,69,3302	0/0:21,0:21:63.22:0,63,3105	0/0:8,0:8:24.08:0,24,1087
chr10	49116289	.	TAACCAACCAACC	T	4674.88	PASS	AB=1.000;AC=27;AF=0.519;AN=52;BaseQRankSum=1.555;DP=647;FS=7.783;HRun=0;HaplotypeScore=215.7481;InbreedingCoeff=0.8171;MQ=56.11;MQ0=16;MQRankSum=-1.170;QD=16.06;ReadPosRankSum=-0.455;VQSLOD=2.4899;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:38:21.07:0,21,480	0/0:9,0:9:18.06:0,18,636	./.	./.	1/1:14,0:14:11.95:146,12,0	0/0:25,0:29:57.19:0,57,1227	0/0:14,0:12:9.74:0,10,130	0/0:25,0:22:0:0,0,0	0/0:23,0:24:48.11:0,48,1045	1/1:17,13:28:36.37:721,36,0	1/1:7,7:13:15.05:359,15,0	1/1:13,15:28:12.04:368,12,0	1/1:10,12:22:9.50:267,10,0	1/1:13,12:25:5.81:192,6,0	0/0:29,0:29:51.17:0,51,1595	0/0:25,0:30:45.12:0,45,1346	1/1:27,0:26:36.08:602,36,0	0/1:14,0:14:23.42:333,0,23	0/0:29,0:25:33.11:0,33,1424	0/0:23,0:22:33.10:0,33,1365	0/0:48,0:45:81.22:0,81,3005	1/1:6,12:17:20.78:206,21,0	1/1:13,12:24:5.88:149,6,0	1/1:17,0:17:14.80:212,15,0	1/1:9,14:23:18.06:549,18,0	1/1:12,10:21:24.90:373,25,0	0/0:20,0:20:48.16:0,48,1982	1/1:3,9:12:6.02:199,6,0
chr10	49116808	.	A	ATT	8534.17	PASS	AB=1.000;AC=43;AF=0.796;AN=54;BaseQRankSum=5.640;DP=318;FS=107.695;HRun=6;HaplotypeScore=64.8460;InbreedingCoeff=0.8667;MQ=65.26;MQ0=2;MQRankSum=-8.279;QD=34.83;ReadPosRankSum=0.568;VQSLOD=0.0082;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:87.23:0,87,1042	0/0:4,0:4:12.04:0,12,146	0/0:14,0:14:29.30:0,29,325	0/0:5,0:5:12:0,12,131	1/1:4,23:27:69.22:1139,69,0	1/1:0,0:5:7.49:26,7,0	1/1:2,0:10:22.93:90,23,0	1/1:9,16:25:57.10:854,57,0	1/1:2,0:7:11.38:42,11,0	1/1:0,7:7:21.07:353,21,0	1/1:3,14:17:48.15:783,48,0	1/1:1,9:10:24.08:394,24,0	1/1:1,3:4:9.03:152,9,0	1/1:1,11:12:33.11:558,33,0	0/0:19,0:19:51.16:0,51,622	1/1:1,0:4:7.49:26,7,0	1/1:4,4:9:11.49:161,11,0	1/1:4,2:6:9.03:146,9,0	1/1:3,7:10:21.07:355,21,0	1/1:0,13:13:39.13:659,39,0	0/1:4,0:4:0:0,0,0	1/1:4,3:6:15.02:202,15,0	1/1:4,4:8:15.03:226,15,0	./.	1/1:2,22:24:66.23:1104,66,0	1/1:4,9:12:30.10:506,30,0	1/1:3,6:9:17.79:303,18,0	1/1:4,9:12:27.09:456,27,0
chr10	49116821	.	AT	A	191.47	PASS	AC=8;AF=0.148;AN=54;BaseQRankSum=-2.165;DP=303;FS=0.000;HRun=8;HaplotypeScore=76.5811;InbreedingCoeff=0.7097;MQ=48.96;MQ0=20;MQRankSum=-3.596;QD=6.60;ReadPosRankSum=-0.481;VQSLOD=0.6078;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:31:75.23:0,75,906	0/0:3,0:3:9.03:0,9,109	0/0:11,0:10:21.05:0,21,239	0/0:4,0:3:6.02:0,6,73	0/0:25,0:25:58.02:0,58,375	1/1:1,3:4:3:29,3,0	1/1:4,9:10:20.06:180,20,0	0/0:16,0:15:37.62:0,38,211	1/1:7,1:6:3:29,3,0	0/0:6,0:6:14.40:0,14,77	0/0:15,0:15:34.63:0,35,204	0/0:10,0:8:23.13:0,23,142	0/0:5,0:5:5.75:0,6,31	0/0:12,0:10:23:0,23,123	0/0:19,0:19:45.10:0,45,527	1/1:0,3:3:9.01:87,9,0	0/0:12,0:12:10.45:0,10,87	0/0:9,0:8:14.64:0,15,119	0/0:12,0:10:23:0,23,124	0/0:12,0:12:26.10:0,26,155	0/0:3,0:2:3.01:0,3,36	0/0:5,0:4:8.86:0,9,62	0/0:5,0:3:8.63:0,9,46	./.	0/0:23,0:22:46.25:0,46,272	0/0:10,0:9:25.98:0,26,145	0/0:7,0:7:17.63:0,18,139	0/0:11,1:9:23.42:0,23,174
chr10	49116829	.	T	TA	5247.12	PASS	AB=0.696;AC=32;AF=0.593;AN=54;BaseQRankSum=5.386;DP=316;FS=117.052;HRun=1;HaplotypeScore=52.5453;InbreedingCoeff=0.6607;MQ=35.46;MQ0=53;MQRankSum=-8.219;QD=25.72;ReadPosRankSum=0.430;VQSLOD=0.1710;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:30:75.24:0,75,963	0/0:5,0:3:9.03:0,9,116	0/0:8,0:7:14.21:0,14,191	0/0:3,0:2:6.02:0,6,70	1/1:6,23:25:54.14:727,54,0	0/0:3,0:3:2.90:0,3,16	0/0:16,0:9:23.10:0,23,126	1/1:7,11:15:45.01:545,45,0	0/0:8,0:4:2.90:0,3,16	1/1:1,5:5:15.05:211,15,0	1/1:3,11:13:33.11:463,33,0	1/1:4,7:8:24.03:314,24,0	1/1:1,3:4:6.02:84,6,0	1/1:2,8:8:24.08:337,24,0	0/0:20,0:17:48:0,48,562	0/0:5,0:4:8.71:0,9,47	1/1:10,3:12:11.93:120,12,0	0/1:5,4:7:62.09:112,0,62	1/1:6,9:10:27.07:361,27,0	1/1:2,9:9:27.09:363,27,0	0/0:4,0:2:3.01:0,3,39	1/1:4,3:4:0.14:67,0,0	1/1:3,3:3:9.03:126,9,0	./.	1/1:3,15:16:45.15:625,45,0	1/1:4,9:10:30.05:393,30,0	0/1:4,3:6:39.05:127,0,39	1/1:7,6:9:23.92:274,24,0
chr10	49116939	.	CCT	C	373.01	PASS	AB=0.801;AC=8;AF=0.182;AN=44;BaseQRankSum=2.608;DP=200;FS=29.578;HRun=0;HaplotypeScore=26.7982;InbreedingCoeff=-0.0601;MQ=41.15;MQ0=58;MQRankSum=-2.512;QD=8.67;ReadPosRankSum=-0.062;VQSLOD=1.3012;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,2:26:5.61:0,6,815	0/1:5,1:3:36.44:36,0,98	0/0:8,0:5:5.79:0,6,151	0/0:14,0:3:3.01:0,3,37	./.	0/0:7,0:3:6.02:0,6,108	0/0:10,0:4:9.03:0,9,159	0/0:10,0:2:5.94:0,6,41	0/0:4,0:3:1.06:0,1,51	0/0:4,0:1:2.80:0,3,13	./.	./.	0/0:3,1:3:5.81:0,6,67	0/1:4,3:6:1.12:125,0,1	0/0:10,1:11:1.12:0,1,303	0/1:6,1:3:7.04:40,0,7	./.	0/1:1,1:3:36.80:37,0,62	1/1:4,3:3:9.03:137,9,0	0/0:7,0:4:8.76:0,9,85	0/0:10,0:2:3.01:0,3,54	./.	0/0:5,0:3:4.77:0,5,24	./.	0/1:6,1:5:33.25:33,0,84	0/0:3,0:1:2.97:0,3,20	0/1:4,2:4:42.75:82,0,43	0/0:4,0:1:2.84:0,3,14
chr10	49116942	.	C	CCCCCCTTGTCGCCCT	604.39	PASS	AB=0.889;AC=3;AF=0.075;AN=40;BaseQRankSum=-2.065;DP=217;FS=25.278;HRun=0;HaplotypeScore=49.7614;InbreedingCoeff=-0.1666;MQ=39.69;MQ0=65;MQRankSum=-2.368;QD=31.81;ReadPosRankSum=-2.216;VQSLOD=-0.1211;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:26:51.18:0,51,2151	0/0:6,0:3:9.03:0,9,292	0/0:8,0:5:12.04:0,12,302	0/0:14,0:3:3.01:0,3,125	./.	0/0:6,0:3:6.02:0,6,261	0/0:8,0:4:9.03:0,9,353	./.	0/0:3,0:3:6.02:0,6,191	0/0:7,0:2:3.01:0,3,105	./.	./.	0/0:5,0:3:6.02:0,6,235	0/0:5,1:6:12.04:0,12,428	0/0:13,0:12:18.06:0,18,782	0/0:8,0:3:6.02:0,6,157	./.	0/0:4,0:3:8.95:0,9,255	0/0:7,0:3:9.03:0,9,323	0/1:8,0:4:10.96:11,0,224	0/0:15,0:3:3.01:0,3,130	./.	0/1:3,0:3:13.97:14,0,101	./.	0/1:4,4:6:92.46:669,0,92	./.	0/0:6,0:3:9.03:0,9,306	0/0:6,0:1:3.01:0,3,106
chr10	49122896	.	G	GGTAA	934.08	PASS	AC=6;AF=0.120;AN=50;BaseQRankSum=-1.065;DP=527;FS=8.840;HRun=0;HaplotypeScore=38.2252;InbreedingCoeff=0.6944;MQ=24.09;MQ0=167;MQRankSum=-3.572;QD=32.21;ReadPosRankSum=1.436;VQSLOD=2.3203;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:21:39.07:0,39,772	0/0:13,0:5:9.03:0,9,189	./.	./.	0/0:28,0:8:9.03:0,9,188	1/1:5,2:4:6.02:173,6,0	1/1:7,5:6:18.06:471,18,0	0/0:47,0:8:24.08:0,24,484	1/1:2,7:5:15.05:417,15,0	0/0:15,0:2:3.01:0,3,63	0/0:17,0:2:3.01:0,3,63	0/0:16,0:10:21.07:0,21,440	0/0:19,0:14:24.06:0,24,462	0/0:24,0:11:24.08:0,24,502	0/0:26,0:15:18.06:0,18,377	./.	0/0:19,0:9:18.06:0,18,377	0/0:12,0:7:12.04:0,12,251	0/0:25,0:5:15.05:0,15,314	0/0:34,0:7:12.04:0,12,249	0/0:16,0:11:30.10:0,30,621	0/0:15,0:6:12.04:0,12,251	0/0:21,0:6:12.04:0,12,228	0/0:20,0:13:27.09:0,27,548	0/0:28,0:6:3.01:0,3,63	0/0:22,0:8:21.03:0,21,384	0/0:21,0:8:15.05:0,15,290	0/0:14,0:3:9.03:0,9,188
chr10	49124268	.	CAG	C	943.71	PASS	AB=0.833;AC=7;AF=0.135;AN=52;BaseQRankSum=7.093;DP=533;FS=1.693;HRun=0;HaplotypeScore=68.2066;InbreedingCoeff=0.7358;MQ=32.19;MQ0=130;MQRankSum=0.657;QD=11.65;ReadPosRankSum=0.321;VQSLOD=3.4198;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:48:99:0,120,2245	0/0:12,0:11:33.11:0,33,617	./.	./.	0/0:24,0:8:15.05:0,15,280	0/0:16,0:8:24.08:0,24,448	0/0:18,0:6:9.03:0,9,168	0/0:32,0:3:9.03:0,9,168	0/0:23,0:20:33.11:0,33,613	0/0:19,0:8:24.08:0,24,449	0/0:14,0:5:12.03:0,12,193	0/0:18,0:12:21.07:0,21,375	0/0:11,0:7:12.04:0,12,224	0/0:24,0:16:27.09:0,27,485	0/0:17,0:14:36.11:0,36,642	0/0:7,0:6:6.02:0,6,112	0/0:45,0:29:42.11:0,42,750	0/0:14,0:14:27.07:0,27,459	0/1:12,3:4:47.07:79,0,47	1/1:3,12:10:21.07:309,21,0	1/1:6,23:19:24.04:329,24,0	0/0:10,0:9:21.03:0,21,356	0/0:19,0:10:18.06:0,18,336	0/0:16,0:11:12:0,12,188	0/0:19,0:9:15.05:0,15,281	0/0:27,0:12:30.10:0,30,561	1/1:9,13:11:27.02:371,27,0	0/0:12,0:11:17.97:0,18,336
chr10	49124643	.	C	CTTT	4046.47	PASS	AB=0.944;AC=41;AF=0.732;AN=56;BaseQRankSum=-0.594;DP=318;FS=3.550;HRun=12;HaplotypeScore=60.7840;InbreedingCoeff=0.6137;MQ=70.80;MQ0=4;MQRankSum=-4.740;QD=17.75;ReadPosRankSum=-3.951;VQSLOD=1.1890;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:38:91.49:0,91,995	0/0:5,0:6:11.92:0,12,119	0/0:17,0:15:14.64:0,15,143	0/0:11,0:10:14.62:0,15,129	1/1:5,6:12:18:242,18,0	1/1:2,0:3:2.99:23,3,0	0/0:8,0:8:2.75:0,3,17	1/1:9,8:19:34.29:474,34,0	0/1:5,0:5:0:0,0,0	1/1:6,7:11:19.40:272,19,0	1/1:4,7:12:23.95:320,24,0	1/1:1,6:7:9:108,9,0	0/1:7,2:8:8.71:93,0,9	1/1:5,2:7:2.64:52,3,0	0/0:5,0:6:4.43:0,4,64	0/1:3,0:3:0:0,0,0	1/1:1,14:17:31.35:553,31,0	1/1:6,6:13:13.29:223,13,0	1/1:4,0:6:3.01:43,3,0	1/1:15,2:20:18.04:235,18,0	1/1:2,0:4:3.01:43,3,0	1/1:4,0:7:6.02:80,6,0	1/1:2,7:15:18.04:281,18,0	1/1:2,7:10:18.51:299,19,0	1/1:6,6:12:17.09:268,17,0	1/1:8,7:13:18.01:237,18,0	1/1:1,1:4:4.43:47,4,0	1/1:3,2:7:10.28:156,10,0
chr10	49124804	.	C	CGTGTGTGTGT	31863.93	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=0.608;DP=470;FS=57.704;HRun=0;HaplotypeScore=142.7254;InbreedingCoeff=0.9888;MQ=59.91;MQ0=0;MQRankSum=-12.584;QD=84.52;ReadPosRankSum=-0.281;VQSLOD=2.7562;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:87.30:0,87,2759	0/0:12,0:12:33.11:0,33,997	0/0:10,0:10:20.96:0,21,590	0/0:17,0:17:32.90:0,33,613	1/1:4,9:13:30.10:1545,30,0	1/1:7,0:22:54.18:966,54,0	1/1:4,0:13:24.08:415,24,0	1/1:27,4:34:78.27:3091,78,0	1/1:4,0:21:48.16:830,48,0	1/1:7,8:17:48.16:2367,48,0	1/1:5,9:16:30.10:1547,30,0	1/1:9,8:18:33.11:1568,33,0	1/1:7,4:15:30.10:1438,30,0	1/1:7,12:20:36.12:1843,36,0	0/0:23,0:23:63.20:0,63,1924	1/1:2,0:12:27.09:467,27,0	1/1:4,4:8:24.08:1142,24,0	1/1:5,5:11:18.06:810,18,0	1/1:10,0:19:51.16:1432,51,0	1/1:4,0:16:39.13:1191,39,0	1/1:10,0:12:15.05:461,15,0	1/1:4,10:16:39.13:1887,39,0	1/1:6,11:17:39.13:1973,39,0	1/1:7,10:22:30.10:1546,30,0	1/1:4,5:8:18.06:929,18,0	1/1:7,11:17:51.14:2149,51,0	1/1:4,0:13:39.13:1181,39,0	1/1:0,9:10:21.07:1085,21,0
chr10	49126758	.	TTATGTGTGTGTGTGTG	T	7449.99	PASS	AB=0.663;AC=22;AF=0.440;AN=50;BaseQRankSum=4.619;DP=608;FS=2.376;HRun=0;HaplotypeScore=279.1138;InbreedingCoeff=0.8693;MQ=65.92;MQ0=3;MQRankSum=-3.087;QD=32.68;ReadPosRankSum=-2.629;VQSLOD=3.6037;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:45:99:0,117,5851	0/0:12,0:12:30.06:0,30,1105	0/0:35,0:24:69.02:0,69,1450	0/0:35,0:24:59.54:0,60,1239	0/1:0,30:30:0:0,0,0	0/0:17,0:17:25.41:0,25,627	0/0:13,0:13:36.09:0,36,525	1/1:2,27:28:77.97:938,78,0	0/0:28,0:28:59.68:0,60,1008	1/1:15,6:20:54.04:975,54,0	./.	1/1:11,9:20:32.96:771,33,0	1/1:5,8:13:27.06:818,27,0	1/1:0,25:25:8.82:413,9,0	0/0:22,0:22:63.20:0,63,3987	0/0:14,0:14:42.14:0,42,743	0/1:15,4:19:9.71:799,0,10	1/1:11,3:14:28.57:688,29,0	0/0:19,0:17:51.11:0,51,1847	0/0:28,0:28:63.20:0,63,3229	0/0:39,0:39:90.26:0,90,4450	1/1:7,4:11:9.03:245,9,0	./.	./.	1/1:9,9:18:18.03:320,18,0	1/1:2,21:23:54.01:1182,54,0	0/0:14,0:14:27.04:0,27,1217	1/1:3,2:5:9.01:300,9,0
chr10	49126760	.	ATG	A	329.98	PASS	AB=0.987;AC=24;AF=0.500;AN=48;BaseQRankSum=8.338;DP=608;FS=7.762;HRun=0;HaplotypeScore=183.2062;InbreedingCoeff=0.1447;MQ=64.02;MQ0=3;MQRankSum=-7.478;QD=1.05;ReadPosRankSum=-0.002;VQSLOD=2.0958;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:46,1:46:11.18:0,11,994	0/0:12,0:12:14.84:0,15,198	0/0:35,0:23:16.17:0,16,157	0/0:37,0:25:9.03:0,9,137	./.	0/1:17,0:17:20.19:20,0,31	0/1:13,0:13:17.07:30,0,17	1/1:28,0:27:2.60:10,3,0	0/1:27,0:27:28.88:60,0,29	1/1:20,0:19:5.18:37,5,0	./.	1/1:17,0:17:10.89:50,11,0	1/1:13,0:13:13.73:64,14,0	1/1:25,0:25:4.80:27,5,0	0/0:23,0:23:54.10:0,54,795	0/1:14,0:14:11.51:12,0,59	0/1:18,0:18:13.10:27,0,13	0/1:15,0:15:16.36:16,0,28	0/0:19,0:18:24.05:0,24,322	0/1:28,1:29:22.66:23,0,553	0/1:37,3:40:53.86:54,0,722	1/1:11,0:11:1.55:4,2,0	./.	./.	0/0:17,0:17:1.55:0,2,4	1/1:21,0:21:3.80:34,4,0	0/0:15,0:15:15.05:0,15,231	1/1:5,0:5:5.06:21,5,0
chr10	49126779	.	TGTGTGTG	T	1335.83	PASS	AB=0.947;AC=16;AF=0.286;AN=56;BaseQRankSum=11.658;DP=648;FS=20.548;HRun=0;HaplotypeScore=232.3902;InbreedingCoeff=-0.0155;MQ=45.62;MQ0=7;MQRankSum=-6.929;QD=5.39;ReadPosRankSum=2.540;VQSLOD=0.8137;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,102,3316	0/0:6,0:6:18.06:0,18,620	0/0:40,0:15:42.14:0,42,981	0/0:58,0:18:41.15:0,41,849	0/0:38,0:38:3.05:0,3,104	0/1:11,11:22:8.02:178,0,8	0/1:9,7:15:17.29:176,0,17	0/0:30,0:29:21.14:0,21,405	1/1:7,14:21:17.10:373,17,0	0/1:17,0:16:48.13:48,0,345	0/0:20,0:19:4.69:0,5,74	0/1:15,0:15:23.12:97,0,23	0/1:13,0:13:99:116,0,158	0/1:29,0:29:61.58:64,0,62	0/0:25,0:25:72.25:0,72,2479	1/1:8,6:14:21.58:204,22,0	0/1:13,0:15:68.32:68,0,242	0/1:16,0:17:45.75:46,0,372	0/0:19,0:17:48.14:0,48,1229	0/0:29,0:29:63.22:0,63,2043	0/0:48,0:47:96.33:0,96,2986	0/0:12,0:12:9.72:0,10,183	0/0:21,0:21:3.01:0,3,38	0/1:22,0:22:0:0,0,0	0/1:16,0:16:4.74:5,0,98	0/1:25,0:25:89.74:90,0,221	0/0:13,0:13:20.86:0,21,696	0/1:6,0:6:32.77:33,0,131
chr10	49126800	.	ACG	A	553.23	PASS	AB=0.979;AC=17;AF=0.304;AN=56;BaseQRankSum=4.842;DP=620;FS=25.923;HRun=0;HaplotypeScore=189.4842;InbreedingCoeff=-0.0869;MQ=41.37;MQ0=13;MQRankSum=1.273;QD=1.98;ReadPosRankSum=1.231;VQSLOD=0.5485;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:59.95:0,60,650	0/1:4,0:4:0.69:1,0,79	0/0:32,0:10:25.74:0,26,169	0/0:56,0:14:36.82:0,37,240	0/1:33,1:34:13.46:13,0,19	0/0:22,0:23:10.12:0,10,61	0/0:15,0:14:10.68:0,11,88	0/0:28,0:27:53.25:0,53,422	0/0:23,0:24:6.08:0,6,37	0/1:22,1:21:81.35:81,0,123	0/1:22,0:21:14.98:54,0,15	0/1:19,0:18:18.97:25,0,19	0/1:18,0:18:35.69:36,0,71	0/1:19,0:19:17.78:18,0,33	0/0:24,0:24:25.90:0,26,590	0/0:11,0:11:5.20:0,5,52	0/1:18,0:18:19.01:76,0,19	0/1:19,1:20:5.36:108,0,5	0/0:18,0:17:16.19:0,16,156	0/0:22,0:22:6.40:0,6,190	0/0:41,0:40:40.93:0,41,350	0/1:14,1:15:7.84:8,0,56	0/1:19,0:18:13.60:15,0,14	1/1:20,0:20:4.65:18,5,0	1/1:21,0:21:11.43:88,11,0	0/1:18,0:18:69.80:112,0,70	0/0:12,0:12:8.29:0,8,75	0/1:8,0:8:6.39:59,0,6
chr10	49126801	.	CGT	C	2160.47	PASS	AB=0.805;AC=38;AF=0.760;AN=50;BaseQRankSum=0.504;DP=623;FS=0.815;HRun=0;HaplotypeScore=185.5588;InbreedingCoeff=-0.1448;MQ=41.27;MQ0=13;MQRankSum=-0.913;QD=4.50;ReadPosRankSum=-0.907;VQSLOD=2.9155;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:35:20.49:20,0,248	0/1:3,1:4:27.16:27,0,39	./.	./.	1/1:24,9:34:8.08:87,8,0	1/1:15,0:23:11.36:56,11,0	0/0:10,0:14:3.01:0,3,45	0/1:25,1:27:19.52:20,0,44	0/1:16,0:24:11.91:30,0,12	1/1:15,6:21:23.72:226,24,0	1/1:18,4:22:5.93:66,6,0	0/1:12,4:18:3.60:79,0,4	0/1:10,6:18:1.26:130,0,1	0/1:11,6:19:8.46:98,0,8	0/1:21,3:24:36.23:36,0,312	0/1:8,0:11:27.37:30,0,27	1/1:10,8:18:15.02:166,15,0	1/1:7,14:21:9.29:256,9,0	0/1:15,0:18:6.60:7,0,13	1/1:10,0:21:3.01:32,3,0	./.	1/1:10,2:15:11.69:94,12,0	1/1:16,3:18:6.01:66,6,0	1/1:13,6:21:8.55:99,9,0	1/1:13,6:21:23.73:227,24,0	1/1:12,5:18:26.57:237,27,0	1/1:4,0:12:5.68:28,6,0	1/1:2,5:8:17.88:180,18,0
chr10	49127311	.	T	TTC	2194.07	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=10.841;DP=478;FS=7.478;HRun=0;HaplotypeScore=67.6139;InbreedingCoeff=0.9125;MQ=96.43;MQ0=0;MQRankSum=-9.745;QD=38.49;ReadPosRankSum=0.108;VQSLOD=5.5093;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,111,1774	0/0:1,0:1:3.01:0,3,49	0/0:20,0:20:60.20:0,60,957	0/0:28,0:28:84.27:0,84,1290	0/0:10,0:10:30.10:0,30,484	1/1:3,9:12:32.84:452,33,0	1/1:5,14:19:54.13:707,54,0	0/0:33,0:33:99:0,99,1577	1/1:4,12:16:48.16:720,48,0	0/0:19,0:19:57.19:0,57,918	0/0:16,0:16:45.15:0,45,732	0/0:9,0:9:27.09:0,27,436	0/0:14,0:14:39.12:0,39,607	0/0:14,0:14:42.14:0,42,683	0/0:17,0:17:51.14:0,51,781	1/1:3,7:10:30.10:474,30,0	0/0:28,0:28:78.25:0,78,1238	0/0:17,0:17:48.14:0,48,753	0/0:20,0:20:60.18:0,60,944	0/0:8,0:8:24.08:0,24,391	0/0:43,0:43:99:0,126,2041	0/0:3,0:3:9.01:0,9,118	0/0:4,0:4:12.04:0,12,196	0/0:37,0:37:99:0,111,1748	0/0:6,0:6:18.06:0,18,294	0/0:13,0:13:36.12:0,36,588	0/0:20,0:20:60.20:0,60,975	0/0:3,0:3:9.03:0,9,147
chr10	49127313	.	T	TAC	2202.92	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=11.408;DP=474;FS=14.746;HRun=0;HaplotypeScore=68.2083;InbreedingCoeff=0.9120;MQ=95.96;MQ0=0;MQRankSum=-7.759;QD=37.98;ReadPosRankSum=0.290;VQSLOD=4.2320;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,102,1539	0/0:1,0:1:3.01:0,3,46	0/0:20,0:20:54.17:0,54,803	0/0:27,0:27:75.20:0,75,1073	0/0:10,0:10:27.09:0,27,411	1/1:3,9:12:36.10:505,36,0	1/1:6,14:20:51.17:744,51,0	0/0:32,0:32:87.30:0,87,1325	1/1:5,12:17:48.15:706,48,0	0/0:18,0:18:51.16:0,51,758	0/0:17,0:17:45.14:0,45,669	0/0:9,0:9:24.08:0,24,367	0/0:14,0:14:42.11:0,42,597	0/0:14,0:14:42.13:0,42,623	0/0:16,0:16:48.15:0,48,712	1/1:2,7:9:27.09:407,27,0	0/0:28,0:28:75.19:0,75,1074	0/0:16,0:16:42.14:0,42,640	0/0:21,0:21:57.18:0,57,839	0/0:9,0:9:27.07:0,27,387	0/0:42,0:42:99:0,126,1885	0/0:3,0:3:8.93:0,9,88	0/0:4,0:4:12.04:0,12,184	0/0:35,0:35:99:0,105,1578	0/0:6,0:6:18.06:0,18,276	0/0:12,0:12:36.12:0,36,551	0/0:21,0:21:60.19:0,60,897	0/0:3,0:3:9.03:0,9,135
chr10	49127664	.	T	TGA	1376.11	PASS	AB=0.870;AC=9;AF=0.161;AN=56;BaseQRankSum=-6.225;DP=446;FS=4.478;HRun=0;HaplotypeScore=59.2044;InbreedingCoeff=0.6578;MQ=62.40;MQ0=42;MQRankSum=-0.548;QD=8.65;ReadPosRankSum=0.754;VQSLOD=2.8641;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:18.01:0,18,201	0/0:6,0:6:11.87:0,12,122	0/0:51,0:18:12.46:0,12,116	0/1:67,0:21:12.62:13,0,89	0/0:15,0:15:36.07:0,36,418	0/0:2,0:8:17.04:0,17,84	0/0:0,0:13:25.57:0,26,126	0/1:30,1:27:0.10:0,0,479	0/0:3,0:12:17.04:0,17,84	0/0:8,0:7:18.06:0,18,217	0/0:9,0:9:18.06:0,18,217	0/0:9,0:9:18.06:0,18,217	0/0:17,0:16:39.12:0,39,470	0/0:14,0:14:23.64:0,24,266	0/0:11,0:11:21.02:0,21,237	0/0:2,0:10:25.52:0,26,125	0/0:23,0:21:56.71:0,57,659	0/0:11,0:11:27.08:0,27,326	0/1:11,14:20:3.11:424,0,3	1/1:2,9:11:30.10:481,30,0	1/1:0,10:10:21.07:321,21,0	0/0:6,0:6:11.96:0,12,113	0/0:9,0:9:18.06:0,18,217	0/0:5,0:5:9.03:0,9,109	0/0:11,0:11:21.03:0,21,238	0/0:11,0:10:24.07:0,24,290	1/1:6,9:13:18.06:288,18,0	0/0:9,0:9:12.04:0,12,144
chr10	49128783	.	GA	G	4823.84	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=12.282;DP=787;FS=0.364;HRun=1;HaplotypeScore=72.1320;InbreedingCoeff=0.9983;MQ=84.37;MQ0=0;MQRankSum=-4.869;QD=38.59;ReadPosRankSum=1.589;VQSLOD=5.4758;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:58:99:0,175,2730	0/0:7,0:7:21.07:0,21,336	0/0:26,0:26:76.10:0,76,1130	0/0:20,0:20:57.09:0,57,810	0/0:44,0:44:99:0,129,1985	1/1:0,32:32:90.30:1259,90,0	1/1:0,27:27:72.24:1007,72,0	0/0:41,0:41:99:0,120,1869	1/1:0,32:32:90.30:1258,90,0	0/0:40,0:40:99:0,120,1887	0/0:19,0:19:57.18:0,57,887	0/0:20,0:20:60.19:0,60,923	0/0:19,0:19:57.19:0,57,907	0/0:36,0:36:99:0,108,1720	0/0:30,0:30:87.28:0,87,1368	1/1:0,34:34:93.31:1300,93,0	0/0:23,0:23:69.22:0,69,1080	0/0:25,0:25:75.26:0,75,1199	0/0:19,0:19:57.18:0,57,887	0/0:29,0:29:87.30:0,87,1386	0/0:37,0:37:99:0,111,1716	0/0:24,0:24:72.23:0,72,1118	0/0:22,0:22:66.23:0,66,1055	0/0:31,0:31:93.32:0,93,1481	0/0:16,0:16:48.16:0,48,766	0/0:33,0:33:99:0,99,1561	0/0:35,0:34:99:0,104,1633	0/0:8,0:8:24.08:0,24,384
chr10	49129137	.	T	TC	2273.11	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-10.129;DP=677;FS=12.763;HRun=6;HaplotypeScore=64.5517;InbreedingCoeff=0.9985;MQ=81.75;MQ0=0;MQRankSum=0.241;QD=26.74;ReadPosRankSum=1.794;VQSLOD=3.2964;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:96.18:0,96,969	0/0:10,0:10:30.07:0,30,306	0/0:23,0:23:23.59:0,24,394	0/0:24,0:25:54.92:0,55,520	0/0:34,0:34:99:0,99,995	1/1:4,21:25:57.18:717,57,0	1/1:2,12:14:30.10:377,30,0	0/0:25,0:25:66.12:0,66,660	1/1:1,14:15:36.12:453,36,0	0/0:23,0:23:66.14:0,66,669	0/0:32,0:32:92.93:0,93,921	0/0:25,0:25:63.10:0,63,628	0/0:26,0:26:75.14:0,75,752	0/0:18,0:18:51.11:0,51,519	0/0:27,0:27:61.10:0,61,691	1/1:3,28:31:72.16:886,72,0	0/0:31,0:31:84.18:0,84,856	0/0:20,0:20:54.12:0,54,550	0/0:17,0:17:42.06:0,42,413	0/0:35,0:35:87.17:0,87,881	0/0:23,0:23:63.08:0,63,620	0/0:24,0:24:66.12:0,66,660	0/0:30,0:30:78.16:0,78,788	0/0:29,0:29:81.11:0,81,800	0/0:19,0:19:54.12:0,54,550	0/0:22,0:22:57.12:0,57,580	0/0:23,0:22:63.14:0,63,642	0/0:15,0:15:24.05:0,24,245
chr10	49131251	.	GTGTT	G	1079.95	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.643;DP=668;FS=0.000;HRun=0;HaplotypeScore=107.5771;InbreedingCoeff=0.9454;MQ=71.72;MQ0=0;MQRankSum=-5.362;QD=40.00;ReadPosRankSum=0.846;VQSLOD=3.7561;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:87.30:0,87,2316	0/0:4,0:4:12.04:0,12,320	0/0:18,0:18:51.12:0,51,1152	0/0:8,0:8:12.98:0,13,376	0/0:33,0:33:93.32:0,93,2471	0/0:28,0:28:84.29:0,84,2234	0/0:19,0:19:54.19:0,54,1438	0/0:24,0:23:63.22:0,63,1664	0/0:21,0:21:63.22:0,63,1670	0/0:32,0:31:96.33:0,96,2560	0/0:22,0:22:63.22:0,63,1665	0/0:24,0:24:72.25:0,72,1865	0/0:25,0:25:72.25:0,72,1917	0/0:22,0:22:66.23:0,66,1760	0/0:23,0:23:69.24:0,69,1803	1/1:1,26:27:63.21:1175,63,0	0/0:22,0:22:66.23:0,66,1705	0/0:15,0:15:36.12:0,36,940	0/0:20,0:20:57.20:0,57,1439	0/0:32,0:32:96.33:0,96,2539	0/0:19,0:19:57.20:0,57,1519	0/0:30,0:30:90.31:0,90,2401	0/0:31,0:31:93.32:0,93,2479	0/0:30,0:30:90.31:0,90,2313	0/0:24,0:24:66.23:0,66,1736	0/0:30,0:30:90.31:0,90,2363	0/0:46,0:46:99:0,138,3621	0/0:9,0:9:24.08:0,24,640
chr10	49131901	.	GGGGAGGT	G	288.98	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.305;DP=433;FS=1.686;HRun=0;HaplotypeScore=124.1514;InbreedingCoeff=0.9432;MQ=75.33;MQ0=0;MQRankSum=-3.481;QD=41.28;ReadPosRankSum=-0.025;VQSLOD=3.4582;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:96.16:0,96,3329	0/0:8,0:8:21.07:0,21,620	0/0:17,0:17:44.48:0,44,1182	0/0:13,0:12:29.79:0,30,677	0/0:13,0:13:33.11:0,33,1089	0/0:13,0:13:36.12:0,36,1315	0/0:17,0:17:42.14:0,42,1336	0/0:21,0:21:57.20:0,57,1854	0/0:15,0:15:39.13:0,39,1404	0/0:16,0:16:39.13:0,39,1325	0/0:13,0:13:30.10:0,30,1113	0/0:15,0:15:39.13:0,39,1329	0/0:21,0:21:63.20:0,63,2226	0/0:21,0:21:25.28:0,25,1535	0/0:9,0:9:24.08:0,24,882	1/1:0,7:7:15.05:377,15,0	0/0:16,0:16:45.15:0,45,1464	0/0:11,0:11:30.10:0,30,974	0/0:13,0:13:30.10:0,30,920	0/0:18,0:18:45.15:0,45,1686	0/0:29,0:29:78.27:0,78,2650	0/0:13,0:13:33.11:0,33,1175	0/0:19,0:19:51.17:0,51,1940	0/0:11,0:11:27.09:0,27,1057	0/0:13,0:13:33.11:0,33,1194	0/0:14,0:14:39.13:0,39,1520	0/0:14,0:14:36.12:0,36,1189	0/0:4,0:4:12.04:0,12,444
chr10	49135628	.	AAAACAAAACAAAACC	A	1098.12	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.783;DP=590;FS=0.000;HRun=0;HaplotypeScore=233.1516;InbreedingCoeff=0.9979;MQ=68.19;MQ0=3;MQRankSum=-4.928;QD=73.21;ReadPosRankSum=2.597;VQSLOD=2.7993;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:22:60.21:0,60,4200	0/0:10,0:10:30.10:0,30,1612	0/0:26,0:18:52.38:0,52,2257	0/0:29,0:24:64.47:0,64,1790	0/0:23,0:23:63.22:0,63,3835	0/0:33,0:33:96.33:0,96,6057	0/0:19,0:19:57.20:0,57,3628	0/0:30,0:30:84.28:0,84,4846	0/0:13,0:13:36.12:0,36,2514	0/0:19,0:19:57.18:0,57,3703	0/0:19,0:19:57.13:0,57,3658	0/0:12,0:12:36.11:0,36,1842	0/0:19,0:19:57.20:0,57,3909	0/0:20,0:20:60.21:0,60,3755	0/0:22,0:22:63.22:0,63,4443	1/1:2,13:15:27.09:1192,27,0	0/0:28,0:28:81.23:0,81,4964	0/0:19,0:19:54.13:0,54,3150	0/0:22,0:22:60.20:0,60,3261	0/0:32,0:32:87.28:0,87,5454	0/0:27,0:27:78.27:0,78,4968	0/0:20,0:20:60.20:0,60,3840	0/0:28,0:28:81.27:0,81,5165	0/0:11,0:11:33.04:0,33,1985	0/0:16,0:16:45.15:0,45,3044	0/0:24,0:24:69.21:0,69,4080	0/0:15,0:15:39.13:0,39,2473	0/0:16,0:16:48.16:0,48,3527
chr10	49136018	.	G	GA	3570.86	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-8.511;DP=710;FS=0.426;HRun=1;HaplotypeScore=67.0169;InbreedingCoeff=0.9986;MQ=87.96;MQ0=0;MQRankSum=-0.977;QD=39.68;ReadPosRankSum=0.726;VQSLOD=4.1889;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,156,1931	0/0:12,0:12:36.12:0,36,467	0/0:29,0:29:74.38:0,74,943	0/0:25,0:24:39.78:0,40,744	0/0:24,0:24:72.20:0,72,915	1/1:0,13:13:39.13:584,39,0	1/1:1,24:25:60.20:899,60,0	0/0:44,0:44:99:0,129,1599	1/1:1,24:25:63.21:944,63,0	0/0:27,0:27:78.24:0,78,980	0/0:18,0:18:54.15:0,54,673	0/0:26,0:26:78.25:0,78,1012	0/0:23,0:23:66.21:0,66,856	0/0:20,0:20:60.18:0,60,765	0/0:22,0:22:57.18:0,57,728	1/1:1,26:27:78.22:1144,78,0	0/0:27,0:27:81.25:0,81,1036	0/0:7,0:7:21.07:0,21,273	0/0:31,0:31:87.27:0,87,1116	0/0:22,0:22:66.21:0,66,856	0/0:50,0:50:99:0,141,1801	0/0:22,0:22:66.19:0,66,828	0/0:16,0:16:45.15:0,45,581	0/0:27,0:27:81.20:0,81,992	0/0:27,0:27:75.21:0,75,939	0/0:26,0:26:75.24:0,75,961	0/0:32,0:32:96.31:0,96,1244	0/0:10,0:10:29.92:0,30,351
chr10	49136429	.	AGTGTGT	A	1671.31	PASS	AB=0.825;AC=20;AF=0.400;AN=50;BaseQRankSum=4.176;DP=587;FS=2.497;HRun=0;HaplotypeScore=155.1408;InbreedingCoeff=0.3436;MQ=74.43;MQ0=15;MQRankSum=-5.387;QD=6.85;ReadPosRankSum=0.579;VQSLOD=2.2244;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:32:30.01:0,30,694	0/0:3,0:3:6.02:0,6,98	./.	./.	1/1:12,5:18:12.04:197,12,0	0/0:23,0:23:24.08:0,24,602	0/0:22,0:22:6.49:0,6,154	./.	0/0:24,0:23:12.04:0,12,278	1/1:18,2:19:6.21:85,6,0	0/1:11,2:13:15.57:71,0,16	0/1:11,1:16:7.91:65,0,8	0/1:12,1:15:17.57:64,0,18	1/1:15,5:20:15.05:302,15,0	0/0:17,0:20:14.92:0,15,299	0/0:12,0:12:3.01:0,3,72	1/1:26,2:27:3.01:52,3,0	0/1:8,2:10:70.03:134,0,70	0/0:17,0:15:23.11:0,23,480	0/0:13,0:12:6.02:0,6,145	0/0:34,0:33:9.03:0,9,181	0/1:14,0:21:39.29:39,0,59	0/0:4,0:5:5.95:0,6,44	0/1:26,0:29:10.52:13,0,11	1/1:12,11:23:30.10:574,30,0	1/1:16,4:19:8.90:144,9,0	0/0:25,0:23:36.11:0,36,647	1/1:7,3:9:6.02:102,6,0
chr10	49136460	.	G	GTT	843.54	PASS	AB=0.946;AC=9;AF=0.161;AN=56;BaseQRankSum=5.923;DP=620;FS=1.837;HRun=1;HaplotypeScore=154.3556;InbreedingCoeff=0.0879;MQ=47.35;MQ0=19;MQRankSum=-2.495;QD=4.85;ReadPosRankSum=0.499;VQSLOD=-0.5030;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:38:65.50:0,66,558	0/1:7,0:7:2.93:3,0,81	0/0:25,0:14:32.90:0,33,283	0/0:22,0:13:32.06:0,32,312	0/0:19,0:19:35.60:0,36,270	0/0:20,0:20:38.90:0,39,368	1/1:24,0:24:5.45:27,5,0	0/0:26,0:26:77.56:0,78,598	0/1:24,0:23:39.85:40,0,49	0/0:25,0:25:70.89:0,71,544	0/0:14,0:14:38.80:0,39,302	0/0:21,0:21:53.70:0,54,408	0/0:18,0:18:41.61:0,42,298	0/0:18,0:18:40.76:0,41,293	0/0:23,0:23:28.25:0,28,332	0/1:8,11:20:58.57:59,0,65	0/0:27,0:25:42.11:0,42,322	0/0:12,0:12:26.72:0,27,206	0/1:14,0:11:25.90:132,0,26	0/1:17,0:16:5.69:161,0,6	0/1:38,0:36:72.18:269,0,72	0/0:30,0:30:67.76:0,68,524	0/0:14,0:14:35.83:0,36,281	0/0:34,0:34:58.49:0,58,445	0/0:20,0:20:44.07:0,44,314	0/0:27,0:26:71.45:0,71,560	0/1:30,0:29:69.08:289,0,69	0/0:11,0:10:23.76:0,24,171
chr10	49136476	.	G	GTC	6436.63	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=9.968;DP=610;FS=2.596;HRun=0;HaplotypeScore=147.1707;InbreedingCoeff=0.8636;MQ=61.76;MQ0=10;MQRankSum=-4.459;QD=13.49;ReadPosRankSum=3.508;VQSLOD=4.7089;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:31:68.63:0,69,573	0/0:8,0:8:0.06:0,0,101	0/0:40,0:29:80.01:0,80,810	0/0:25,0:20:57.55:0,58,544	1/1:15,0:15:24.51:192,25,0	1/1:21,0:21:4.52:277,5,0	1/1:2,24:26:5.95:111,6,0	1/1:22,0:22:47.96:527,48,0	1/1:1,25:26:9.03:166,9,0	1/1:25,0:25:67.70:584,68,0	1/1:9,0:9:22.51:173,23,0	1/1:19,0:19:40.55:300,41,0	1/1:16,0:16:33.28:224,33,0	1/1:16,0:16:21.56:153,22,0	0/0:28,0:28:37.23:0,37,406	1/1:19,0:19:17.94:171,18,0	1/1:29,0:27:31.16:337,31,0	1/1:11,0:11:26.58:162,27,0	1/1:16,0:15:36.20:274,36,0	1/1:17,0:18:29.84:251,30,0	1/1:36,0:35:28.55:361,29,0	1/1:24,0:24:41.35:323,41,0	1/1:16,0:16:41.91:341,42,0	1/1:30,0:30:34.02:257,34,0	1/1:18,0:18:20.61:158,21,0	1/1:21,0:21:60.85:483,61,0	1/1:31,0:33:67.85:485,68,0	1/1:10,0:10:18.33:127,18,0
chr10	49136590	.	C	CGTGTGTCCATGTTT	81668.32	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-3.938;DP=778;FS=2.114;HRun=0;HaplotypeScore=262.1432;InbreedingCoeff=0.9939;MQ=79.10;MQ0=0;MQRankSum=-16.308;QD=131.94;ReadPosRankSum=0.783;VQSLOD=4.8394;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:42:99:0,114,4143	0/0:7,0:7:21.07:0,21,871	0/0:41,0:41:84.26:0,84,2690	0/0:36,0:35:89.97:0,90,3045	1/1:13,17:32:75.17:3735,75,0	1/1:11,8:23:51.17:2936,51,0	1/1:15,9:24:60.16:3388,60,0	1/1:33,4:39:93.31:5075,93,0	1/1:15,12:28:75.26:4585,75,0	1/1:24,17:42:99:6989,114,0	1/1:9,12:24:69.24:3939,69,0	1/1:18,6:28:54.18:2572,54,0	1/1:12,12:28:66.23:3782,66,0	1/1:15,10:30:66.10:3300,66,0	0/0:31,0:31:78.25:0,78,2898	1/1:8,17:27:66.18:3941,66,0	1/1:8,8:19:48.12:2437,48,0	1/1:10,5:23:36.12:2049,36,0	1/1:8,4:11:24.08:1544,24,0	1/1:10,13:26:60.21:3452,60,0	1/1:10,3:17:21.07:1221,21,0	1/1:17,13:32:87.25:4504,87,0	1/1:13,12:25:66.22:3358,66,0	1/1:16,4:27:33.11:1893,33,0	1/1:15,21:37:99:5776,105,0	1/1:16,15:32:90.24:5145,90,0	1/1:17,14:36:90.31:5010,90,0	1/1:3,4:7:15.05:1040,15,0
chr10	49139323	.	G	GTTT	1829.85	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=5.234;DP=606;FS=8.526;HRun=10;HaplotypeScore=93.1987;InbreedingCoeff=0.9249;MQ=69.09;MQ0=0;MQRankSum=-1.374;QD=36.60;ReadPosRankSum=-0.313;VQSLOD=2.7766;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:19:35.78:0,36,469	0/0:5,0:5:12.03:0,12,146	0/0:19,0:19:5.90:0,6,260	0/0:10,0:10:7.85:0,8,171	0/0:42,0:42:81.42:0,81,1238	1/1:3,17:21:36.12:692,36,0	1/1:1,15:17:42.14:773,42,0	0/0:24,0:24:57.12:0,57,693	1/1:2,9:12:27.09:507,27,0	0/0:24,0:24:63.18:0,63,766	0/0:27,0:27:60.08:0,60,712	0/0:18,0:18:51.14:0,51,620	0/0:25,0:25:44.93:0,45,520	0/0:21,0:21:54.07:0,54,628	0/0:28,0:30:69.22:0,69,858	0/0:20,0:20:50.89:0,51,619	0/0:26,0:29:64.30:0,64,762	0/0:29,0:29:65.92:0,66,783	0/0:16,0:16:36.01:0,36,419	0/0:34,0:34:78.16:0,78,924	0/0:13,0:17:41.84:0,42,436	0/0:17,0:17:33.01:0,33,388	0/0:22,0:22:54.01:0,54,624	0/0:6,0:6:18.06:0,18,219	0/0:35,0:35:90.24:0,90,1094	0/0:22,0:23:52.32:0,52,622	0/0:32,0:33:87.14:0,87,1038	0/0:9,0:9:24.06:0,24,291
chr10	49140039	.	TA	T	4785.74	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=13.633;DP=723;FS=3.639;HRun=2;HaplotypeScore=75.6562;InbreedingCoeff=0.9960;MQ=78.72;MQ0=0;MQRankSum=-3.046;QD=37.10;ReadPosRankSum=2.420;VQSLOD=5.6610;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,132,1954	0/0:11,0:11:33.08:0,33,472	0/0:21,0:21:44.35:0,44,781	0/0:20,0:20:27.85:0,28,677	0/0:22,0:22:66.22:0,66,984	0/0:19,0:19:57.19:0,57,854	0/0:21,0:21:63.21:0,63,935	0/0:33,0:33:96.33:0,96,1439	0/0:29,0:29:87.27:0,87,1259	0/0:23,0:23:66.22:0,66,989	0/0:12,0:12:36.12:0,36,540	0/0:36,0:36:99:0,108,1594	0/0:27,0:27:78.25:0,78,1144	0/0:28,0:28:84.28:0,84,1259	0/0:31,0:31:93.28:0,93,1336	1/1:2,25:27:72.23:934,72,0	0/0:26,0:26:78.26:0,78,1166	0/0:22,0:22:66.20:0,66,967	1/1:0,17:17:51.13:618,51,0	1/1:0,27:27:78.25:1013,78,0	1/1:0,38:38:99:1441,111,0	0/0:31,0:31:93.30:0,93,1369	0/0:31,0:31:93.30:0,93,1363	0/0:31,0:31:87.29:0,87,1304	0/0:35,0:35:99:0,105,1515	0/0:34,0:34:96.32:0,96,1421	1/1:0,20:20:60.20:779,60,0	0/0:6,0:6:15.02:0,15,202
chr10	49142689	.	TACACAC	T	1306.06	PASS	AB=0.834;AC=16;AF=0.296;AN=54;BaseQRankSum=5.983;DP=533;FS=12.375;HRun=0;HaplotypeScore=123.3329;InbreedingCoeff=0.6054;MQ=59.25;MQ0=9;MQRankSum=-4.869;QD=8.32;ReadPosRankSum=0.487;VQSLOD=1.6233;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:35:48.16:0,48,1299	0/0:5,0:6:12.04:0,12,329	./.	0/0:24,0:13:3.01:0,3,38	0/0:20,0:28:10.98:0,11,274	0/1:10,2:17:31.84:38,0,32	0/0:10,1:15:0.44:0,0,55	0/0:25,0:25:18.92:0,19,414	1/1:9,5:14:12.04:243,12,0	0/0:25,0:25:40.38:0,40,1161	0/0:8,0:13:0.47:0,0,1	1/1:12,6:19:15.05:283,15,0	1/1:10,8:17:17.97:340,18,0	0/0:7,0:13:2.82:0,3,78	0/0:17,0:18:26.11:0,26,817	1/1:12,6:20:12.92:245,13,0	0/0:16,0:24:27.09:0,27,786	0/0:11,0:19:27.09:0,27,749	0/1:23,1:24:41.46:41,0,346	0/0:17,0:17:12.04:0,12,388	0/0:25,0:29:38.24:0,38,993	1/1:11,4:15:3.01:61,3,0	1/1:6,5:12:4.57:65,5,0	1/1:15,2:18:9.03:164,9,0	0/0:10,0:17:9.01:0,9,187	0/0:18,0:23:31.33:0,31,767	0/0:8,0:8:18.06:0,18,489	0/0:7,0:12:33.11:0,33,941
chr10	49145339	.	TTC	T	1100.77	PASS	AB=0.878;AC=25;AF=0.446;AN=56;BaseQRankSum=9.997;DP=516;FS=57.519;HRun=0;HaplotypeScore=242.6333;InbreedingCoeff=-0.7317;MQ=41.27;MQ0=14;MQRankSum=-4.203;QD=2.36;ReadPosRankSum=3.410;VQSLOD=0.9401;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:19,7:26:99:100,0,623	0/1:6,1:7:28.99:29,0,121	0/0:20,0:5:3.87:0,4,24	0/1:43,0:11:13.03:13,0,190	0/1:10,3:13:36.53:37,0,356	0/1:8,7:15:99:152,0,163	0/1:20,3:22:22.28:22,0,732	0/1:17,1:17:39.75:40,0,557	0/1:21,3:24:93.95:94,0,231	0/1:29,2:29:99:148,0,349	0/1:10,1:11:27.84:28,0,278	0/1:14,2:16:1.16:1,0,485	0/1:15,6:21:42.17:42,0,589	0/1:7,3:9:29.01:29,0,257	0/1:17,3:20:41.92:42,0,374	0/1:18,1:18:37.61:38,0,351	0/1:21,0:19:1.80:2,0,632	0/0:12,0:12:29.56:0,30,455	0/1:27,0:24:9.77:10,0,586	0/1:6,4:10:41.04:97,0,41	0/1:23,0:21:5.95:6,0,233	0/1:15,4:16:48.02:48,0,395	0/1:7,1:8:3.03:3,0,134	0/0:16,1:14:9.70:0,10,303	0/1:13,6:18:88.72:89,0,445	0/1:19,4:21:99:136,0,333	0/1:11,1:12:37.24:37,0,287	0/1:7,0:7:5.94:6,0,326
chr10	49145349	.	TTC	T	2028.69	PASS	AB=0.963;AC=31;AF=0.554;AN=56;BaseQRankSum=-6.750;DP=385;FS=107.310;HRun=0;HaplotypeScore=235.0284;InbreedingCoeff=-0.3677;MQ=39.05;MQ0=8;MQRankSum=1.171;QD=6.67;ReadPosRankSum=-3.843;VQSLOD=0.3211;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:22:28.27:183,0,28	0/1:4,0:4:16.06:35,0,16	0/0:22,0:4:3.45:0,3,23	0/0:46,0:11:22.24:0,22,211	0/1:10,0:10:13.17:31,0,13	0/0:13,0:13:1.72:0,2,78	0/1:17,0:17:34.36:150,0,34	1/1:9,1:10:14.02:140,14,0	0/1:15,0:15:34.37:82,0,34	0/1:20,3:21:40.58:233,0,41	1/1:5,0:5:10.90:83,11,0	0/1:9,0:9:11.61:106,0,12	0/1:15,0:15:46.30:46,0,110	0/1:9,0:8:4.53:77,0,5	0/1:14,1:15:16.21:102,0,16	0/1:12,1:12:59.40:59,0,60	1/1:14,0:13:14.59:128,15,0	1/1:8,0:8:16.31:83,16,0	0/1:5,1:6:38.70:64,0,39	0/1:8,0:8:2.54:3,0,37	1/1:18,1:18:5.54:52,6,0	0/1:19,0:17:14.41:163,0,14	0/1:6,0:6:10.18:34,0,10	1/1:11,0:9:7.55:79,8,0	0/1:15,1:15:39.23:85,0,39	0/1:14,2:16:40.31:120,0,40	0/1:8,0:8:3.26:3,0,13	0/1:5,1:6:9.05:47,0,9
chr10	49145350	.	TCTC	T	2552.73	PASS	AB=0.804;AC=36;AF=0.643;AN=56;BaseQRankSum=7.042;DP=385;FS=34.276;HRun=0;HaplotypeScore=241.3684;InbreedingCoeff=-0.2420;MQ=38.82;MQ0=8;MQRankSum=-0.763;QD=8.08;ReadPosRankSum=6.607;VQSLOD=1.3026;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:16,7:23:7.13:223,7,0	1/1:2,1:4:0.31:36,0,0	0/0:22,0:4:3.84:0,4,21	0/0:45,0:11:21.18:0,21,215	0/1:6,4:10:11.28:99,0,11	1/1:5,7:12:19.23:213,19,0	0/1:12,5:18:14.24:173,0,14	0/1:10,0:10:13.98:14,0,55	1/1:11,4:15:24.85:170,25,0	1/1:22,2:22:16.44:278,16,0	0/1:3,1:5:7.43:78,0,7	0/1:6,2:8:10.90:16,0,11	0/1:10,6:16:26.86:141,0,27	0/1:5,4:8:4.33:94,0,4	0/1:10,4:15:23.92:96,0,24	1/1:11,1:12:22.59:123,23,0	0/1:7,2:12:35.97:42,0,36	0/1:5,0:7:7.50:31,0,7	0/1:5,0:6:4.11:77,0,4	1/1:3,4:8:13.81:117,14,0	1/1:17,1:17:7.02:34,7,0	1/1:13,6:17:5.60:147,6,0	0/1:5,1:6:7.62:26,0,8	0/1:8,2:9:11.51:12,0,12	0/1:10,6:15:12.74:117,0,13	1/1:11,4:16:13.51:283,14,0	0/1:6,1:8:14.26:39,0,14	0/1:6,0:6:4.78:31,0,5
chr10	49145351	.	CT	C	3876.38	PASS	AB=0.713;AC=31;AF=0.554;AN=56;BaseQRankSum=-5.388;DP=366;FS=76.924;HRun=2;HaplotypeScore=222.8915;InbreedingCoeff=-0.4177;MQ=38.66;MQ0=8;MQRankSum=-0.773;QD=13.41;ReadPosRankSum=-5.065;VQSLOD=-0.1616;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:9,13:22:62.64:392,0,63	0/1:3,1:4:21.65:36,0,22	0/0:22,0:3:4.26:0,4,46	0/0:47,0:11:12.39:0,12,156	0/1:4,5:9:22.03:139,0,22	0/1:9,2:11:20.50:21,0,91	0/1:11,7:18:54.35:298,0,54	1/1:2,6:8:12.46:238,12,0	0/1:10,4:14:24.69:132,0,25	0/1:12,11:21:76.25:321,0,76	1/1:2,3:5:2.77:117,3,0	0/1:2,5:7:12.46:142,0,12	0/1:10,5:15:92.60:100,0,93	0/1:5,4:8:3.17:122,0,3	0/1:8,7:15:6.78:227,0,7	0/1:9,3:11:71.27:71,0,78	1/1:9,4:12:8.77:151,9,0	1/1:3,4:7:20.93:220,21,0	0/1:5,2:7:39.30:69,0,39	0/0:8,0:8:17.30:0,17,103	1/1:4,11:14:2:68,2,0	0/1:8,11:17:36.02:289,0,36	0/1:3,3:6:11.91:82,0,12	1/1:6,4:8:11.89:94,12,0	0/1:7,7:13:29.25:255,0,29	0/1:10,5:15:67.05:155,0,67	0/1:5,2:7:12.97:58,0,13	0/1:2,2:4:17.15:80,0,17
chr10	49145359	.	CTT	C	1296.13	PASS	AB=0.889;AC=23;AF=0.411;AN=56;BaseQRankSum=2.571;DP=339;FS=0.529;HRun=3;HaplotypeScore=238.0314;InbreedingCoeff=-0.5443;MQ=40.22;MQ0=7;MQRankSum=-0.163;QD=5.21;ReadPosRankSum=1.933;VQSLOD=-0.2229;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:20,2:22:99:162,0,294	1/1:3,1:4:1.30:59,1,0	0/1:21,1:5:43.81:54,0,44	0/0:49,0:10:16.79:0,17,156	0/0:7,0:7:18.55:0,19,168	0/1:10,1:11:4.37:4,0,233	0/1:17,1:18:58.92:59,0,193	0/0:8,0:6:14.02:0,14,80	0/1:10,2:12:99:99,0,135	0/1:17,4:20:99:207,0,361	0/0:5,0:5:6.78:0,7,46	0/1:5,2:7:30.38:105,0,30	0/1:10,2:12:3.45:3,0,154	0/1:4,2:5:60.34:60,0,86	0/1:15,3:18:31.05:31,0,174	0/1:10,1:10:99:128,0,166	0/1:8,0:8:28.64:54,0,29	0/1:6,0:6:35.37:63,0,35	0/1:5,0:6:28.16:51,0,28	0/0:7,0:7:5.49:0,5,166	0/1:15,1:15:36.47:56,0,36	0/1:12,3:14:99:100,0,132	0/1:4,1:5:39.99:40,0,45	0/1:8,0:6:3.98:4,0,11	0/0:14,0:13:22.60:0,23,241	0/1:10,3:13:69.97:70,0,327	0/1:3,1:4:36.36:36,0,41	0/1:4,0:4:1.31:1,0,102
chr10	49145361	.	T	TCCC	2047.01	PASS	AB=0.965;AC=29;AF=0.518;AN=56;BaseQRankSum=1.374;DP=349;FS=0.000;HRun=0;HaplotypeScore=267.2886;InbreedingCoeff=-0.6476;MQ=37.44;MQ0=7;MQRankSum=-0.437;QD=7.11;ReadPosRankSum=-0.937;VQSLOD=2.2183;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:20,2:22:99:268,0,209	0/1:3,0:4:1.24:58,0,1	0/1:23,0:5:42.99:66,0,43	0/0:51,0:9:2.02:0,2,124	0/0:10,0:10:3.76:0,4,122	0/1:11,0:11:89.79:90,0,230	0/1:21,0:21:15.74:16,0,261	1/1:3,0:1:2.99:24,3,0	0/1:12,1:14:66.97:154,0,67	0/1:18,1:18:99:168,0,297	0/1:5,0:6:3.92:15,0,4	0/1:5,1:6:40.17:63,0,40	0/1:12,0:12:85.67:86,0,128	0/1:7,0:6:66.70:67,0,95	0/1:16,0:16:93.16:93,0,110	0/1:11,1:12:93.69:94,0,161	1/1:10,0:10:20.32:145,20,0	0/1:5,0:5:7.17:48,0,7	0/1:6,2:7:1.39:109,0,1	0/1:8,0:8:28.66:29,0,132	1/1:14,2:15:0.02:162,0,0	0/1:16,0:15:99:150,0,105	0/1:4,0:4:10.16:10,0,46	0/1:8,0:6:8.26:26,0,8	0/1:15,0:15:58.85:59,0,136	0/1:13,0:14:99:114,0,242	0/1:3,0:3:16.49:16,0,52	0/1:3,1:4:47.83:63,0,48
chr10	49145365	.	TTCCC	T	2765.30	PASS	AB=0.821;AC=29;AF=0.518;AN=56;BaseQRankSum=6.511;DP=368;FS=40.715;HRun=0;HaplotypeScore=280.6878;InbreedingCoeff=-0.4535;MQ=36.96;MQ0=6;MQRankSum=1.624;QD=7.81;ReadPosRankSum=3.453;VQSLOD=1.7411;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:16,7:23:84.62:247,0,85	1/1:3,1:4:0.93:22,1,0	0/1:22,0:5:1.85:2,0,50	0/1:50,0:10:2.84:3,0,45	0/1:7,4:11:33.96:139,0,34	0/1:5,7:12:0.92:219,0,1	0/1:19,4:23:21.15:220,0,21	0/0:3,0:1:3.01:0,3,36	0/1:10,5:15:21.11:163,0,21	0/1:17,3:19:5.84:202,0,6	1/1:4,1:5:6.58:20,7,0	0/1:6,1:7:6.25:78,0,6	0/1:6,6:13:15.88:192,0,16	1/1:7,3:9:1.43:157,1,0	0/1:15,4:19:94.92:167,0,95	0/1:11,4:14:1.32:204,0,1	0/1:8,2:10:42.25:65,0,42	0/0:8,0:8:1.48:0,1,91	0/1:8,0:8:24.48:45,0,24	0/1:6,3:9:33.66:68,0,34	0/1:14,1:14:27.15:27,0,38	0/1:12,4:15:3.76:167,0,4	0/1:3,1:4:9.04:9,0,31	0/1:5,2:5:5.47:9,0,5	0/1:7,6:13:10.19:238,0,10	0/1:14,2:16:21.02:149,0,21	1/1:3,2:5:8.60:96,9,0	0/0:3,0:3:5.71:0,6,37
chr10	49145372	.	CCTT	C	704.60	PASS	AB=0.956;AC=22;AF=0.393;AN=56;BaseQRankSum=3.412;DP=348;FS=14.304;HRun=0;HaplotypeScore=271.2343;InbreedingCoeff=-0.6419;MQ=41.83;MQ0=5;MQRankSum=0.525;QD=2.40;ReadPosRankSum=5.444;VQSLOD=0.6205;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:20,2:21:66.71:67,0,129	0/0:4,0:4:10.19:0,10,48	0/0:26,0:5:8.08:0,8,55	0/1:56,0:12:0.21:0,0,49	0/1:10,0:10:31.57:41,0,32	0/1:12,0:12:21.22:21,0,72	0/1:21,1:22:48.42:48,0,164	0/0:3,0:1:3.01:0,3,44	0/1:13,1:14:27.53:28,0,100	0/1:14,0:13:43.64:44,0,113	0/1:5,1:5:15.16:39,0,15	0/1:6,0:6:13.33:13,0,77	0/1:13,0:13:41.68:42,0,143	0/1:10,0:9:35.12:39,0,35	0/1:14,1:15:52.01:52,0,148	0/1:13,0:12:35.88:36,0,70	0/0:11,0:11:13.64:0,14,99	0/1:7,0:7:29.66:30,0,66	0/1:9,0:8:7.15:7,0,59	0/0:7,0:7:0.19:0,0,68	0/1:10,3:13:10.75:123,0,11	0/1:15,0:14:11.59:12,0,93	0/0:3,0:3:5.02:0,5,20	0/1:7,0:5:20.78:21,0,33	0/1:9,1:10:14.38:79,0,14	0/1:12,0:12:13.63:14,0,103	0/1:3,2:5:7.65:63,0,8	0/1:2,0:2:18.73:35,0,19
chr10	49145374	.	T	TCTCTCAC	922.65	PASS	AB=0.927;AC=7;AF=0.125;AN=56;BaseQRankSum=2.409;DP=341;FS=34.795;HRun=0;HaplotypeScore=293.2972;InbreedingCoeff=-0.1690;MQ=46.25;MQ0=6;MQRankSum=0.101;QD=11.53;ReadPosRankSum=1.336;VQSLOD=1.6613;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:20:46.16:0,46,814	0/0:3,0:3:7.57:0,8,101	0/0:25,0:6:9.02:0,9,116	0/0:59,0:13:13.30:0,13,126	0/0:8,0:8:23.59:0,24,254	0/0:12,0:12:31.69:0,32,477	0/1:21,0:22:11.96:12,0,595	0/0:3,0:1:3.01:0,3,47	0/0:14,0:14:35.29:0,35,409	0/0:14,0:13:35.84:0,36,535	0/0:5,0:4:11.87:0,12,97	0/0:6,0:6:13.33:0,13,186	0/0:13,0:13:35.73:0,36,481	0/0:10,0:9:25.59:0,26,316	0/1:13,0:14:46.05:46,0,473	0/0:12,0:11:20.16:0,20,383	0/1:9,1:10:84.74:442,0,85	0/1:5,3:8:99:341,0,112	0/0:9,0:8:15.50:0,16,199	0/1:7,0:7:47.29:47,0,255	0/1:10,0:11:23.48:23,0,229	0/0:14,0:14:15.43:0,15,403	0/0:3,0:3:9.03:0,9,130	0/1:8,0:6:35.91:139,0,36	0/0:10,0:10:25.23:0,25,370	0/0:11,0:11:29.98:0,30,433	0/0:5,0:5:14.96:0,15,201	0/0:2,0:2:6.02:0,6,76
chr10	49145383	.	TTCCC	T	4284.21	PASS	AB=0.771;AC=34;AF=0.630;AN=54;BaseQRankSum=1.394;DP=354;FS=22.119;HRun=0;HaplotypeScore=275.1786;InbreedingCoeff=-0.1763;MQ=52.91;MQ0=7;MQRankSum=-2.738;QD=17.28;ReadPosRankSum=5.988;VQSLOD=3.0719;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:17,5:21:42.89:305,0,43	1/1:3,0:3:4.26:73,4,0	0/0:37,0:11:20.80:0,21,223	0/0:62,0:11:16.46:0,16,173	1/1:4,4:8:19.20:258,19,0	0/1:9,3:12:55.38:133,0,55	0/1:13,8:21:99:463,0,114	0/0:5,0:3:5.87:0,6,38	1/1:7,5:12:20.98:318,21,0	0/1:10,4:14:64.15:206,0,64	1/1:3,2:4:7.56:92,8,0	1/1:4,3:6:4.19:140,4,0	1/1:9,3:12:22.29:289,22,0	0/1:5,5:10:11.63:258,0,12	1/1:11,5:16:3.71:283,4,0	0/1:6,5:10:12.71:250,0,13	0/1:9,1:10:34.32:55,0,34	0/1:4,3:7:41.96:154,0,42	0/1:6,3:9:3.01:145,0,3	0/1:5,2:7:46.66:98,0,47	0/1:10,3:13:50.78:51,0,52	0/1:11,3:14:15.09:103,0,15	1/1:2,0:2:3:47,3,0	0/1:5,1:5:0.87:66,0,1	1/1:7,3:10:18.93:197,19,0	0/1:6,5:11:58.82:225,0,59	1/1:5,1:6:4.13:77,4,0	./.
chr10	49145394	.	C	CA	84.21	PASS	AB=0.850;AC=6;AF=0.111;AN=54;BaseQRankSum=0.503;DP=354;FS=8.234;HRun=0;HaplotypeScore=267.3931;InbreedingCoeff=-0.1170;MQ=66.39;MQ0=7;MQRankSum=-0.793;QD=1.65;ReadPosRankSum=-2.363;VQSLOD=0.4001;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:18:33.82:0,34,181	0/0:2,0:2:3.89:0,4,36	0/0:45,0:18:9.76:0,10,287	0/0:79,0:19:33.03:0,33,281	0/0:8,0:8:2.75:0,3,68	0/0:12,0:12:31.05:0,31,189	0/0:19,0:19:44.24:0,44,293	0/0:5,0:5:14.91:0,15,133	0/0:11,0:11:23.28:0,23,143	0/0:10,0:10:7.93:0,8,71	0/1:4,0:3:8.16:8,0,13	0/0:7,0:5:14.75:0,15,101	0/0:12,0:12:32.42:0,32,211	0/0:12,0:12:25.72:0,26,133	0/0:13,0:13:8.33:0,8,100	0/0:11,0:10:23.12:0,23,152	0/1:5,3:9:49.21:64,0,49	0/1:4,3:7:13.19:92,0,13	0/0:5,0:6:9.43:0,9,57	0/0:5,0:6:13.80:0,14,70	0/1:10,1:12:2.05:2,0,75	0/1:9,1:10:10.86:11,0,93	0/0:1,0:1:2.80:0,3,13	0/1:5,2:7:18.64:19,0,52	0/0:9,0:9:19.26:0,19,119	0/0:10,0:10:26.11:0,26,153	0/0:6,0:6:7.98:0,8,28	./.
chr10	49145395	.	TTC	T	268.34	PASS	AB=0.964;AC=20;AF=0.370;AN=54;BaseQRankSum=-0.526;DP=352;FS=0.552;HRun=0;HaplotypeScore=268.4664;InbreedingCoeff=-0.4486;MQ=66.56;MQ0=7;MQRankSum=-0.015;QD=1.35;ReadPosRankSum=-2.125;VQSLOD=2.0657;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:19,0:18:15.56:16,0,45	0/0:2,0:2:5.83:0,6,34	0/0:44,0:18:8.83:0,9,360	0/0:77,0:19:6.50:0,7,270	0/1:8,0:8:15.44:15,0,19	0/1:12,0:12:7.69:8,0,35	0/1:19,0:19:29.44:29,0,119	0/1:5,0:5:15.37:15,0,28	0/1:11,0:11:11.11:11,0,91	0/1:9,0:9:4.38:4,0,37	0/0:4,0:3:3.58:0,4,26	0/1:6,1:5:1.69:2,0,29	0/1:12,0:12:17.58:18,0,107	1/1:10,2:12:4.10:50,4,0	0/1:12,1:13:33.20:34,0,33	0/0:11,0:10:5.20:0,5,62	0/1:9,1:9:28.06:80,0,28	0/1:6,1:7:11.17:13,0,11	0/0:6,0:6:0.84:0,1,34	0/0:6,0:6:2.84:0,3,26	0/1:12,0:12:4.68:5,0,29	0/1:9,1:10:7.71:8,0,46	0/0:1,0:1:2.04:0,2,6	0/1:8,0:7:22.04:33,0,22	0/1:9,0:9:18.18:18,0,20	0/1:10,0:10:6.09:6,0,38	0/1:5,1:6:6.49:41,0,6	./.
chr10	49145409	.	C	CT	118.26	PASS	AB=0.835;AC=19;AF=0.352;AN=54;BaseQRankSum=3.621;DP=346;FS=0.570;HRun=2;HaplotypeScore=235.1315;InbreedingCoeff=-0.3479;MQ=70.97;MQ0=9;MQRankSum=-4.177;QD=0.54;ReadPosRankSum=4.463;VQSLOD=-0.6685;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:13,2:15:21.23:21,0,59	0/0:1,0:1:2.50:0,2,9	0/0:54,1:20:3.93:0,4,250	0/1:76,0:20:19.19:19,0,168	0/0:5,3:8:5.40:0,5,61	0/1:9,1:9:1.99:2,0,49	0/1:9,8:17:53.15:53,0,71	0/0:10,0:10:23.16:0,23,143	0/1:6,4:10:14.76:15,0,60	0/1:6,2:8:29.26:29,0,38	0/1:1,2:3:3.99:4,0,15	0/0:7,3:8:9.02:0,9,67	0/0:11,2:13:20.33:0,20,167	0/1:7,2:9:12.88:13,0,93	0/0:8,3:11:5.18:0,5,128	0/1:6,5:10:17.06:17,0,38	0/1:8,0:7:0.58:1,0,56	0/1:2,0:2:0.11:0,0,10	0/1:6,1:6:11.46:13,0,11	0/1:5,0:5:0.92:1,0,39	0/0:9,3:12:21.92:0,22,145	0/1:7,3:10:10.16:10,0,56	1/1:1,0:1:2.04:6,2,0	0/1:7,1:7:12.17:12,0,36	0/1:8,1:9:5.59:6,0,61	0/1:4,3:7:31.90:32,0,68	0/0:5,0:5:14.70:0,15,112	./.
chr10	49145411	.	TC	T	1408.17	PASS	AB=0.967;AC=28;AF=0.519;AN=54;BaseQRankSum=5.694;DP=336;FS=1.191;HRun=4;HaplotypeScore=222.8315;InbreedingCoeff=-0.2578;MQ=71.92;MQ0=9;MQRankSum=-1.839;QD=7.49;ReadPosRankSum=4.429;VQSLOD=0.3175;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:14,0:14:2.49:92,0,2	1/1:1,0:1:2.88:15,3,0	0/0:51,1:20:13.90:0,14,250	0/0:77,1:20:17.01:0,17,181	0/1:8,0:8:25.63:51,0,26	1/1:9,1:9:0.74:69,1,0	0/1:17,0:17:29.30:226,0,29	0/0:10,0:10:23.70:0,24,158	1/1:9,0:9:7.38:140,7,0	0/1:6,0:6:22.38:79,0,22	0/1:3,0:3:7.79:31,0,8	0/1:10,0:8:43.47:61,0,43	0/1:12,1:13:39.60:82,0,40	0/1:8,1:9:30.61:89,0,31	0/1:11,0:11:36.51:71,0,37	1/1:10,1:10:16.98:143,17,0	1/1:7,0:6:5.70:47,6,0	0/0:2,0:2:1:0,1,16	0/1:6,1:6:38.53:43,0,39	0/1:5,0:5:18.24:28,0,18	0/1:12,0:12:6.43:6,0,61	0/1:10,0:10:26.73:44,0,27	1/1:1,0:1:3.01:41,3,0	0/1:8,0:7:14.08:49,0,14	0/1:8,1:9:6.70:94,0,7	0/1:6,1:7:6.59:63,0,7	0/0:5,0:5:11.32:0,11,64	./.
chr10	49145413	.	CCCT	C	719.10	PASS	AB=0.989;AC=23;AF=0.426;AN=54;BaseQRankSum=5.476;DP=328;FS=32.105;HRun=0;HaplotypeScore=225.9872;InbreedingCoeff=-0.1391;MQ=71.33;MQ0=9;MQRankSum=-5.101;QD=4.38;ReadPosRankSum=-1.553;VQSLOD=0.7155;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:13,0:13:1.40:48,0,1	0/0:1,0:1:1.25:0,1,3	0/0:51,0:19:8.65:0,9,504	0/0:75,0:19:15.56:0,16,256	0/1:8,0:8:35.86:36,0,41	1/1:10,0:9:12.21:66,12,0	0/1:17,0:17:43.29:86,0,43	0/0:9,0:9:20.99:0,21,231	0/1:9,0:9:22.74:43,0,23	0/0:6,0:6:9.52:0,10,50	0/0:3,0:3:3.15:0,3,45	0/1:9,0:8:28.86:29,0,83	0/1:12,1:13:34.07:34,0,89	0/1:9,0:9:38.59:40,0,39	0/1:11,0:11:37.28:37,0,62	1/1:9,1:9:5.96:87,6,0	1/1:7,0:6:17.24:99,17,0	0/0:2,0:2:4.52:0,5,23	0/0:7,0:6:6.71:0,7,73	1/1:4,0:4:2.96:25,3,0	0/1:11,1:12:59.11:77,0,59	0/1:10,0:10:38.42:43,0,38	1/1:1,0:1:1.25:3,1,0	0/0:7,0:6:2.19:0,2,44	0/1:9,0:9:24.37:62,0,24	0/1:7,0:7:18.53:32,0,19	0/1:5,0:5:28.78:29,0,36	./.
chr10	49145418	.	TTC	T	1996.79	PASS	AB=0.796;AC=29;AF=0.537;AN=54;BaseQRankSum=8.896;DP=296;FS=72.612;HRun=0;HaplotypeScore=186.4717;InbreedingCoeff=-0.4025;MQ=71.76;MQ0=7;MQRankSum=-2.500;QD=11.82;ReadPosRankSum=3.363;VQSLOD=0.5513;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,5:9:5.19:160,5,0	1/1:0,1:1:2.99:23,3,0	0/0:46,1:18:31.43:0,31,412	0/0:65,0:17:0.72:0,1,249	0/1:4,1:5:18.42:18,0,86	1/1:3,5:7:17.78:181,18,0	0/1:11,4:15:99:303,0,143	0/0:12,0:11:29.99:0,30,473	0/1:6,4:10:62.25:147,0,62	0/1:4,1:5:37.13:37,0,88	0/1:2,1:3:26.25:26,0,57	0/1:8,1:8:46.36:46,0,159	0/1:6,5:11:97.42:149,0,97	0/1:5,3:8:99:152,0,103	0/1:8,3:11:99:128,0,139	0/1:7,1:7:7.67:68,0,8	1/1:4,3:6:3.82:203,4,0	0/0:2,0:2:3.90:0,4,60	0/1:8,0:7:9.90:10,0,182	1/1:1,1:2:5.69:52,6,0	0/1:11,2:12:27.99:28,0,180	0/1:6,2:8:86.60:116,0,87	1/1:0,1:1:1.82:5,2,0	0/1:6,2:7:23.07:23,0,57	0/1:3,3:6:59.51:94,0,60	0/1:5,2:7:34.67:100,0,35	0/1:3,2:5:81.31:81,0,132	./.
chr10	49145424	.	TC	T	1241.58	PASS	AB=0.789;AC=27;AF=0.500;AN=54;BaseQRankSum=7.643;DP=260;FS=10.734;HRun=3;HaplotypeScore=163.7610;InbreedingCoeff=-0.2431;MQ=72.87;MQ0=6;MQRankSum=-2.864;QD=9.00;ReadPosRankSum=5.957;VQSLOD=0.2231;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,2:8:11.75:119,12,0	1/1:1,0:1:2.80:13,3,0	0/0:41,1:16:27.28:0,27,214	0/0:49,0:15:2.50:0,3,130	0/1:4,1:5:1.08:1,0,27	1/1:6,1:6:9:91,9,0	0/1:9,6:15:20.52:206,0,21	0/0:13,0:12:29.96:0,30,342	0/1:7,3:10:37.70:130,0,38	0/1:3,1:4:35:61,0,35	0/1:1,2:3:6.40:38,0,6	0/1:6,3:8:58.62:59,0,88	0/1:8,2:10:25.41:152,0,25	0/1:5,1:6:58.88:61,0,59	0/1:8,3:11:59.45:84,0,59	0/1:4,4:7:16.59:115,0,17	1/1:7,0:6:2.98:39,3,0	0/0:2,0:2:1.07:0,1,34	0/1:5,1:5:18.87:19,0,89	1/1:1,1:2:2.84:14,3,0	0/0:9,1:9:10.38:0,10,83	0/1:5,2:7:35.75:37,0,36	1/1:1,0:1:3.01:37,3,0	0/1:6,0:5:15.13:33,0,15	0/1:4,1:5:31.55:39,0,32	0/1:4,2:6:31.10:53,0,31	0/0:5,0:5:10.90:0,11,79	./.
chr10	49145428	.	TTC	T	290.55	PASS	AB=0.830;AC=23;AF=0.426;AN=54;BaseQRankSum=5.386;DP=225;FS=43.848;HRun=0;HaplotypeScore=141.9486;InbreedingCoeff=-0.0745;MQ=73.94;MQ0=6;MQRankSum=-1.527;QD=2.03;ReadPosRankSum=0.350;VQSLOD=0.9358;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:3,4:6:3.98:83,4,0	1/1:0,1:1:1.82:5,2,0	0/0:34,1:14:19.46:0,19,184	0/1:44,0:14:2.36:2,0,130	1/1:2,1:3:1.24:3,1,0	1/1:2,3:4:1.19:15,1,0	0/1:8,4:12:12.41:34,0,12	0/0:13,0:12:24.03:0,24,283	0/0:5,3:8:0.35:0,0,84	0/1:3,1:4:7.25:7,0,42	0/0:2,1:3:2.29:0,2,32	0/0:7,1:8:12.74:0,13,68	0/1:4,4:8:44.20:75,0,44	0/1:3,2:5:21.18:31,0,21	0/1:8,2:10:39.42:39,0,68	0/1:5,1:6:6.15:6,0,36	1/1:3,3:6:0.43:77,0,0	0/0:2,0:2:3.87:0,4,24	0/0:6,0:5:12.25:0,12,120	0/0:1,1:2:2.22:0,2,7	0/1:7,2:8:16.41:16,0,56	0/1:5,1:6:10.75:16,0,11	0/0:0,1:1:0:0,0,0	1/1:4,2:5:1.49:4,1,0	0/1:4,1:5:2.46:2,0,12	0/1:4,0:4:8.53:9,0,50	0/0:2,0:2:5.95:0,6,49	./.
chr10	49145429	.	TC	T	211.61	PASS	AB=0.920;AC=33;AF=0.635;AN=52;BaseQRankSum=0.352;DP=216;FS=10.523;HRun=4;HaplotypeScore=136.4788;InbreedingCoeff=0.0983;MQ=75.28;MQ0=6;MQRankSum=-2.455;QD=1.31;ReadPosRankSum=-0.804;VQSLOD=-0.5780;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:7,0:6:3.70:12,4,0	0/1:1,0:1:0:0,0,0	0/1:33,0:13:20.96:21,0,77	0/0:41,2:14:9.68:0,10,93	1/1:3,0:3:0.47:1,0,0	0/1:5,0:4:0.48:0,0,9	0/1:11,0:11:1.06:1,0,3	1/1:13,0:12:2.75:7,3,0	0/1:8,0:8:11.07:16,0,11	0/1:3,1:4:1.30:27,0,1	1/1:3,0:3:4.52:24,5,0	1/1:8,0:8:3.11:10,3,0	1/1:8,0:8:6.74:25,7,0	1/1:5,0:5:0.43:2,0,0	1/1:10,0:10:10.64:45,11,0	0/1:6,0:6:1.98:10,0,2	0/1:3,3:6:13.01:24,0,13	1/1:1,0:1:1.55:4,2,0	0/1:5,1:5:36.08:50,0,36	0/0:2,0:2:2.60:0,3,10	0/1:6,2:7:1.11:32,0,1	0/1:5,0:5:0.34:0,0,5	0/0:1,0:1:0.89:0,1,2	1/1:4,1:4:4.85:15,5,0	1/1:5,0:5:2.29:6,2,0	0/0:4,0:4:1.74:0,2,11	./.	./.
chr10	49145431	.	C	CCTTT	2098.56	PASS	AB=0.956;AC=45;AF=0.833;AN=54;BaseQRankSum=1.417;DP=201;FS=5.525;HRun=0;HaplotypeScore=145.2030;InbreedingCoeff=0.2382;MQ=77.81;MQ0=5;MQRankSum=-3.027;QD=16.14;ReadPosRankSum=-1.143;VQSLOD=3.1220;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:7,0:6:6.48:26,6,0	1/1:1,0:1:0.47:1,0,0	0/0:30,0:12:14.84:0,15,152	0/0:40,0:14:3.16:0,3,82	1/1:3,0:3:5.97:62,6,0	1/1:5,0:4:11.60:91,12,0	1/1:10,0:10:28.66:227,29,0	1/1:12,0:12:21.86:323,22,0	0/1:7,1:8:5.14:135,0,5	1/1:4,0:4:10.06:88,10,0	1/1:3,0:3:5.91:78,6,0	1/1:8,0:8:20.81:173,21,0	0/1:8,0:8:34.56:36,0,35	1/1:5,0:5:13.76:99,14,0	1/1:8,2:10:11.17:265,11,0	1/1:5,0:5:14.03:90,14,0	1/1:6,0:6:8.26:67,8,0	1/1:1,0:1:2.04:6,2,0	0/1:6,0:5:24.84:70,0,25	1/1:2,0:2:2.60:10,3,0	0/1:7,1:7:1.19:101,0,1	1/1:5,0:5:13.02:89,13,0	1/1:1,0:1:2.84:14,3,0	0/1:4,0:3:0.08:0,0,1	1/1:3,0:3:9.02:109,9,0	1/1:3,0:3:3.22:19,3,0	1/1:1,0:1:3.01:49,3,0	./.
chr10	49145436	.	C	CTT	533.21	PASS	AB=0.844;AC=29;AF=0.558;AN=52;BaseQRankSum=3.444;DP=131;FS=13.979;HRun=0;HaplotypeScore=97.7546;InbreedingCoeff=-0.0942;MQ=77.68;MQ0=4;MQRankSum=-2.088;QD=4.44;ReadPosRankSum=-0.157;VQSLOD=1.7466;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:3,2:4:28.70:31,0,29	0/0:0,0:1:0:0,0,0	0/1:16,0:9:15.79:16,0,132	0/1:27,0:9:13.83:14,0,22	0/1:1,0:1:0:0,0,0	1/1:2,2:3:6.93:43,7,0	0/1:6,2:8:2.71:60,0,3	0/1:5,0:4:0.03:0,0,0	0/1:5,2:7:28.61:29,0,70	0/1:2,1:3:17.62:18,0,30	1/1:1,0:1:0.89:2,1,0	1/1:2,1:3:4.04:14,4,0	0/0:2,2:4:10.31:0,10,65	1/1:1,1:2:4.81:29,5,0	0/1:5,1:7:5.24:100,0,5	0/1:4,1:5:2.97:24,0,3	0/1:3,3:6:4.94:113,0,5	1/1:1,0:1:2.92:17,3,0	0/1:4,0:4:15.55:16,0,38	0/0:1,0:1:2.22:0,2,7	0/1:4,2:5:39.20:65,0,39	1/1:2,1:3:7.97:46,8,0	0/0:0,1:1:0.47:0,0,1	1/1:2,1:3:3.45:16,3,0	1/1:0,1:1:2.74:12,3,0	0/0:3,0:3:4.25:0,4,31	./.	./.
chr10	49145565	.	C	CTCCCT	15721.26	PASS	AB=1.000;AC=31;AF=0.554;AN=56;BaseQRankSum=-8.971;DP=641;FS=0.749;HRun=0;HaplotypeScore=172.0604;InbreedingCoeff=0.9269;MQ=59.27;MQ0=0;MQRankSum=-5.469;QD=46.24;ReadPosRankSum=2.333;VQSLOD=4.8631;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,105,2002	0/0:8,0:8:18.06:0,18,362	0/1:28,0:21:10.38:10,0,456	0/0:40,0:25:31.22:0,31,636	1/1:6,15:22:33.11:800,33,0	0/0:15,0:15:39.07:0,39,742	0/0:31,0:31:85.65:0,86,1545	1/1:10,2:15:24:490,24,0	0/0:24,0:24:48.10:0,48,872	1/1:8,14:25:48.15:1266,48,0	1/1:6,9:15:27.09:812,27,0	1/1:6,15:26:42.14:1261,42,0	1/1:6,15:21:39.13:1172,39,0	1/1:4,19:23:42.10:1192,42,0	0/0:27,0:27:72.23:0,72,1396	0/0:23,0:23:63.09:0,63,1167	1/1:1,25:28:63.22:1896,63,0	1/1:1,8:12:24.08:723,24,0	0/0:16,0:16:33.09:0,33,573	0/0:16,0:16:36.07:0,36,613	0/0:39,0:39:98.85:0,99,1848	1/1:8,11:21:20.70:629,21,0	1/1:4,15:19:27.02:703,27,0	1/1:3,17:22:36.12:1084,36,0	1/1:7,12:20:36.12:1083,36,0	1/1:9,27:38:84.25:2239,84,0	0/0:19,0:18:45.14:0,45,823	1/1:0,4:4:12.04:361,12,0
chr10	49146699	.	CGA	C	3900.02	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=11.443;DP=658;FS=0.000;HRun=0;HaplotypeScore=80.5595;InbreedingCoeff=0.9915;MQ=77.01;MQ0=0;MQRankSum=-0.496;QD=34.82;ReadPosRankSum=1.897;VQSLOD=5.9706;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,108,1870	0/0:6,0:6:18.06:0,18,303	0/0:15,0:15:19.80:0,20,394	0/0:15,0:15:27.04:0,27,382	0/0:12,0:12:30.10:0,30,506	0/0:22,0:22:66.23:0,66,1137	0/0:39,0:39:99:0,108,1824	0/0:18,0:18:48.16:0,48,805	0/0:26,0:26:69.24:0,69,1190	0/0:27,0:27:78.26:0,78,1320	0/0:12,0:12:27.09:0,27,467	0/0:39,0:39:99:0,114,1894	0/0:23,0:23:63.22:0,63,1082	0/0:39,0:39:99:0,111,1864	0/0:22,0:22:60.21:0,60,1039	1/1:1,16:17:42.14:559,42,0	0/0:38,0:38:96.33:0,96,1658	0/0:39,0:39:99:0,114,1974	1/1:2,18:20:54.15:686,54,0	1/1:0,5:5:15.01:179,15,0	1/1:1,44:45:99:1638,123,0	0/0:18,0:18:45.14:0,45,745	0/0:12,0:12:30.10:0,30,518	0/0:37,0:37:99:0,105,1813	0/0:17,0:17:45.15:0,45,758	0/0:24,0:24:66.23:0,66,1142	1/1:1,24:25:63.21:839,63,0	0/0:8,0:8:21.07:0,21,364
chr10	49146856	.	GCC	G	3779.19	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=11.402;DP=663;FS=1.328;HRun=6;HaplotypeScore=80.0818;InbreedingCoeff=0.9995;MQ=81.74;MQ0=1;MQRankSum=-4.919;QD=33.15;ReadPosRankSum=1.058;VQSLOD=3.5023;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,108,1908	0/0:10,0:10:30.09:0,30,510	0/0:19,0:19:44.37:0,44,737	0/0:27,0:27:69.19:0,69,1163	0/0:24,0:24:63.22:0,63,1124	0/0:25,0:25:75.25:0,75,1304	0/0:28,0:28:78.27:0,78,1403	0/0:21,0:21:54.19:0,54,972	0/0:23,0:23:66.23:0,66,1180	0/0:17,0:17:51.12:0,51,844	0/0:10,0:10:30.10:0,30,526	0/0:24,0:24:72.25:0,72,1286	0/0:23,0:23:69.21:0,69,1184	0/0:35,0:35:99:0,105,1882	0/0:24,0:24:72.23:0,72,1233	1/1:0,18:18:48.16:640,48,0	0/0:24,0:24:66.23:0,66,1187	0/0:34,0:34:99:0,99,1782	1/1:1,20:21:57.16:741,57,0	1/1:0,12:12:30.10:400,30,0	1/1:1,39:40:93.30:1241,93,0	0/0:17,0:17:48.16:0,48,864	0/0:19,0:19:54.17:0,54,936	0/0:40,0:40:99:0,117,2105	0/0:18,0:19:50.64:0,51,819	0/0:33,0:33:99:0,99,1729	1/1:2,21:22:57.19:758,57,0	0/0:11,0:11:30.09:0,30,509
chr10	49147320	.	A	AG	1252.93	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=10.153;DP=640;FS=2.942;HRun=1;HaplotypeScore=97.0239;InbreedingCoeff=0.8241;MQ=66.96;MQ0=3;MQRankSum=-8.773;QD=19.89;ReadPosRankSum=-2.041;VQSLOD=3.3181;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,141,1817	0/0:10,0:10:20.16:0,20,306	0/0:22,0:20:56.88:0,57,656	0/0:21,0:20:56.53:0,57,690	0/0:13,0:13:39.13:0,39,506	0/0:26,0:26:72.23:0,72,935	0/0:25,0:25:72.23:0,72,933	0/0:28,0:28:84.27:0,84,1091	0/0:18,0:18:54.15:0,54,673	0/0:27,0:27:81.26:0,81,1052	0/0:12,0:12:36.10:0,36,453	0/0:37,0:37:99:0,102,1310	0/0:35,0:35:99:0,99,1280	0/0:30,0:30:87.27:0,87,1116	0/0:25,0:25:72.23:0,72,935	0/1:10,0:10:47.88:269,0,48	0/0:40,0:40:99:0,114,1479	0/0:27,0:27:78.25:0,78,1013	1/1:6,1:7:18.06:257,18,0	1/1:10,0:10:9.50:125,10,0	1/1:12,6:17:7.11:175,7,0	0/0:8,0:8:21.07:0,21,273	0/0:20,0:20:60.20:0,60,779	0/0:42,0:42:99:0,126,1635	0/0:23,0:23:69.22:0,69,896	0/0:29,0:29:84.26:0,84,1076	1/1:18,0:18:48.09:583,48,0	0/0:11,0:11:33.11:0,33,428
chr10	49147535	.	CT	C	3622.30	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-11.028;DP=648;FS=7.416;HRun=9;HaplotypeScore=96.0489;InbreedingCoeff=0.9953;MQ=74.47;MQ0=0;MQRankSum=-3.897;QD=23.52;ReadPosRankSum=0.135;VQSLOD=3.7364;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:41,1:42:89.85:0,90,1257	0/0:11,0:11:27.07:0,27,302	0/0:17,0:17:40.91:0,41,432	0/0:13,0:13:15.91:0,16,165	0/0:28,0:28:51.95:0,52,364	1/1:1,24:25:63.03:577,63,0	1/1:2,13:15:36.02:329,36,0	0/0:35,1:36:60.37:0,60,395	1/1:1,16:17:45.02:412,45,0	0/0:28,0:28:21.71:0,22,249	0/0:16,0:16:18.16:0,18,161	0/0:34,0:34:46.67:0,47,402	0/0:27,0:27:71.31:0,71,385	0/0:24,0:24:66.19:0,66,353	0/0:19,0:19:45.13:0,45,519	1/1:2,24:26:71.98:650,72,0	0/0:21,0:21:29.55:0,30,261	0/0:12,0:12:31.93:0,32,180	1/1:2,11:13:32.94:283,33,0	1/1:3,24:27:69.03:631,69,0	1/1:0,9:9:26.92:230,27,0	0/0:31,0:31:56.22:0,56,373	0/0:27,1:28:43.34:0,43,341	0/0:28,0:28:67.87:0,68,365	0/0:25,0:24:36.63:0,37,289	0/0:37,0:37:96.92:0,97,473	1/1:2,20:22:54.87:510,55,0	0/0:17,0:17:43.58:0,44,249
chr10	49150690	.	GGT	G	4621.11	PASS	AB=0.938;AC=13;AF=0.232;AN=56;BaseQRankSum=12.103;DP=933;FS=0.708;HRun=0;HaplotypeScore=113.0835;InbreedingCoeff=0.7559;MQ=70.88;MQ0=13;MQRankSum=-0.657;QD=19.34;ReadPosRankSum=1.009;VQSLOD=5.1391;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,132,2099	0/0:11,0:11:24.08:0,24,383	0/0:58,0:38:49.95:0,50,863	0/0:49,0:32:42.57:0,43,530	0/0:35,0:35:93.30:0,93,1488	0/0:31,0:31:81.28:0,81,1319	0/1:19,1:21:21.34:21,0,502	0/0:48,0:48:52.89:0,53,1285	0/0:44,0:44:99:0,116,1925	0/0:36,1:37:44.06:0,44,1212	0/0:24,1:25:22.99:0,23,847	0/0:31,0:31:42.01:0,42,1154	0/0:54,0:54:99:0,115,2163	0/0:35,0:35:99:0,99,1581	0/0:42,2:44:49.05:0,49,1809	1/1:5,40:42:99:1228,99,0	0/0:20,0:20:48.16:0,48,784	0/0:21,1:22:23.82:0,24,844	1/1:13,21:33:63.18:762,63,0	1/1:1,30:31:84.26:1042,84,0	1/1:7,35:40:78.24:967,78,0	0/0:31,0:31:66.22:0,66,1067	0/0:19,0:19:42.14:0,42,666	0/0:20,0:20:54.17:0,54,854	0/0:25,1:27:27.83:0,28,920	0/1:27,2:29:2.17:2,0,1005	1/1:3,22:23:48.02:595,48,0	0/1:11,1:12:4.09:4,0,459
chr10	49152023	.	GA	G	2785.56	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=10.031;DP=767;FS=0.457;HRun=1;HaplotypeScore=70.2436;InbreedingCoeff=0.9998;MQ=76.08;MQ0=0;MQRankSum=-1.933;QD=32.39;ReadPosRankSum=1.743;VQSLOD=3.3645;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,156,2400	0/0:12,0:12:32.99:0,33,447	0/0:18,0:18:54.17:0,54,824	0/0:16,0:16:48.16:0,48,725	0/0:32,0:32:96.31:0,96,1501	1/1:0,34:34:84.28:1172,84,0	1/1:0,31:31:72.24:1002,72,0	0/0:36,0:36:99:0,108,1619	1/1:0,21:21:54.18:754,54,0	0/0:31,0:31:93.30:0,93,1435	0/0:15,0:15:45.15:0,45,705	0/0:27,0:27:81.20:0,81,1174	0/0:33,0:33:99:0,99,1530	0/0:28,0:28:81.20:0,81,1173	0/0:29,0:29:84.27:0,84,1316	0/0:28,0:28:84.24:0,84,1272	0/0:36,0:36:99:0,108,1636	0/0:20,0:20:57.15:0,57,874	0/0:28,0:28:81.27:0,81,1266	0/0:26,0:26:78.21:0,78,1168	0/0:15,0:15:45.15:0,45,715	0/0:30,0:30:90.24:0,90,1335	0/0:17,0:17:51.09:0,51,739	0/0:41,0:41:99:0,117,1739	0/0:25,0:25:75.26:0,75,1192	0/0:42,0:42:99:0,126,1890	0/0:30,0:30:89.96:0,90,1369	0/0:12,0:12:36.12:0,36,574
chr10	49153637	.	AGT	A	2900.18	PASS	AB=0.766;AC=34;AF=0.654;AN=52;BaseQRankSum=4.472;DP=612;FS=0.000;HRun=0;HaplotypeScore=91.4128;InbreedingCoeff=0.1202;MQ=66.34;MQ0=7;MQRankSum=1.266;QD=6.47;ReadPosRankSum=2.416;VQSLOD=3.1529;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,1:31:30.01:0,30,347	0/1:8,1:9:9.01:9,0,201	./.	./.	0/1:17,4:21:12.99:38,0,13	1/1:12,4:15:6.02:66,6,0	0/1:15,7:23:21.96:158,0,22	1/1:17,3:20:11.93:108,12,0	1/1:13,5:19:8.85:80,9,0	1/1:12,8:20:20.86:195,21,0	0/1:13,8:21:7.01:102,0,7	1/1:20,14:35:10.60:280,11,0	0/1:4,9:13:23.89:147,0,24	1/1:11,12:23:27.07:297,27,0	0/0:21,5:26:27.08:0,27,382	0/1:20,1:21:39.50:39,0,45	1/1:9,12:23:35.42:313,35,0	0/1:7,11:18:9.94:87,0,10	0/0:19,0:19:11.93:0,12,103	0/0:30,0:28:8.14:0,8,79	1/1:27,0:26:1.24:3,1,0	1/1:11,5:17:11.86:113,12,0	0/1:5,6:11:32.93:87,0,33	0/1:12,15:27:53.71:294,0,54	1/1:12,11:26:32.25:276,32,0	1/1:18,7:28:25.83:238,26,0	0/1:10,0:10:11.77:15,0,12	1/1:6,9:16:14.71:127,15,0
chr10	49158858	.	C	CAG	15785.21	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-18.394;DP=781;FS=0.291;HRun=0;HaplotypeScore=107.9787;InbreedingCoeff=0.9874;MQ=86.23;MQ0=0;MQRankSum=-2.312;QD=39.46;ReadPosRankSum=1.130;VQSLOD=6.7567;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,120,1530	0/0:7,0:7:12.04:0,12,154	0/0:38,0:38:33.31:0,33,771	0/0:27,0:27:54.88:0,55,637	1/1:2,20:23:57.20:961,57,0	0/0:25,0:25:69.13:0,69,838	0/0:27,0:27:72.18:0,72,882	1/1:8,32:41:99:1616,99,0	0/0:27,0:27:75.23:0,75,950	1/1:4,24:28:72.68:1133,73,0	1/1:4,11:15:30.10:506,30,0	1/1:5,28:33:81.28:1365,81,0	1/1:4,26:30:72.25:1214,72,0	1/1:2,34:36:84.29:1415,84,0	0/0:40,0:40:99:0,102,1299	0/0:29,0:29:81.24:0,81,1015	1/1:3,30:33:84.29:1417,84,0	1/1:1,19:20:45.15:759,45,0	0/0:21,0:21:42.10:0,42,511	0/0:23,0:23:60.15:0,60,753	0/0:37,0:37:90.25:0,90,1115	1/1:2,21:23:24.60:973,25,0	1/1:4,12:18:33.11:557,33,0	1/1:5,41:47:43.19:1845,43,0	1/1:2,18:20:36.12:607,36,0	1/1:3,26:29:75.26:1265,75,0	0/0:36,0:35:99:0,102,1280	1/1:0,4:4:9.03:152,9,0
chr10	49160739	.	TTCC	T	4192.73	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=13.475;DP=629;FS=5.358;HRun=0;HaplotypeScore=102.0260;InbreedingCoeff=0.9860;MQ=78.30;MQ0=0;MQRankSum=-5.749;QD=41.11;ReadPosRankSum=1.457;VQSLOD=5.1861;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,102,2348	0/0:3,0:3:9.03:0,9,207	0/0:19,0:19:51.17:0,51,1081	0/0:16,0:16:48.12:0,48,969	0/0:19,0:19:51.18:0,51,1153	0/0:20,0:20:54.16:0,54,1198	0/0:27,0:27:75.26:0,75,1681	0/0:28,0:28:81.26:0,81,1768	0/0:26,0:26:75.26:0,75,1709	0/0:21,0:21:60.20:0,60,1342	0/0:19,0:19:57.18:0,57,1257	0/0:32,0:32:93.30:0,93,2095	0/0:28,0:28:84.27:0,84,1888	0/0:29,0:29:78.26:0,78,1732	0/0:41,0:41:99:0,120,2767	1/1:2,23:25:63.22:1069,63,0	0/0:35,0:35:99:0,105,2303	0/0:20,0:20:60.19:0,60,1338	1/1:3,11:14:33.08:487,33,0	1/1:0,22:21:57.16:928,57,0	1/1:1,16:17:36.08:582,36,0	0/0:22,0:22:63.22:0,63,1453	0/0:14,0:14:39.13:0,39,889	0/0:33,0:33:96.26:0,96,2116	0/0:14,0:14:42.14:0,42,968	0/0:19,0:19:54.19:0,54,1222	1/1:0,24:24:66.23:1125,66,0	0/0:8,0:8:24.08:0,24,553
chr10	49161108	.	AGCC	A	1605.09	PASS	AB=0.981;AC=19;AF=0.339;AN=56;BaseQRankSum=8.176;DP=424;FS=26.207;HRun=0;HaplotypeScore=146.1908;InbreedingCoeff=0.2948;MQ=68.77;MQ0=19;MQRankSum=-8.239;QD=7.01;ReadPosRankSum=4.939;VQSLOD=1.4499;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:13,0:13:34.01:34,0,126	0/1:6,0:6:7.35:7,0,118	0/0:49,0:15:20.05:0,20,293	0/1:54,0:15:5.34:5,0,219	0/0:18,0:17:20.48:0,20,133	0/0:13,0:13:33.31:0,33,273	0/0:11,0:11:29.65:0,30,225	0/0:16,0:16:32.20:0,32,292	0/0:8,0:8:22.73:0,23,157	0/1:11,0:11:10.33:10,0,126	0/1:8,1:9:7.21:7,0,92	0/0:7,0:7:13.59:0,14,102	0/0:7,0:7:14.56:0,15,119	0/0:13,1:14:8.98:0,9,161	0/0:2,0:2:5.99:0,6,57	1/1:16,0:16:47.91:403,48,0	0/1:16,1:15:37.92:38,0,105	0/1:24,0:24:3.64:4,0,222	1/1:11,0:11:9.91:186,10,0	1/1:17,0:17:50.39:383,50,0	1/1:7,0:7:11.89:82,12,0	0/0:8,1:9:16.76:0,17,130	0/0:10,0:10:26.49:0,26,202	0/1:11,0:9:15.02:15,0,91	0/0:14,0:14:5.20:0,5,145	0/0:15,0:15:28.54:0,29,256	1/1:24,0:24:71.68:603,72,0	0/1:8,0:5:7.58:8,0,26
chr10	49161140	.	AG	A	1117.78	PASS	AB=0.971;AC=21;AF=0.375;AN=56;BaseQRankSum=9.852;DP=454;FS=13.423;HRun=1;HaplotypeScore=111.5946;InbreedingCoeff=0.6186;MQ=41.73;MQ0=42;MQRankSum=-6.469;QD=5.98;ReadPosRankSum=1.492;VQSLOD=-0.6048;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:24:0.47:0,0,220	0/1:7,0:6:12.95:13,0,34	0/0:11,1:3:5.25:0,5,23	0/0:19,2:3:6:0,6,59	0/0:20,1:21:31.19:0,31,204	1/1:14,0:13:2.52:203,3,0	1/1:14,0:13:30.70:224,31,0	0/0:28,0:25:42.89:0,43,316	1/1:10,1:10:20.49:154,20,0	0/0:20,0:19:47.25:0,47,359	0/0:12,0:11:13.98:0,14,169	0/1:11,0:9:4.15:4,0,66	0/0:10,0:10:11.81:0,12,94	0/0:18,1:18:15.63:0,16,160	0/0:20,0:18:33.44:0,33,252	1/1:17,0:15:27.25:117,27,0	0/0:12,0:9:11.51:0,12,74	0/0:28,0:25:56.89:0,57,382	1/1:13,0:11:22.70:99,23,0	1/1:13,0:12:26.31:135,26,0	1/1:3,0:3:5.91:37,6,0	0/1:5,1:6:11.50:15,0,11	0/0:18,0:16:18.31:0,18,212	0/1:19,0:14:1.06:1,0,172	0/0:14,0:13:33.64:0,34,211	0/0:19,0:17:45.51:0,46,296	1/1:31,0:27:61.95:307,62,0	0/0:13,0:11:26.79:0,27,184
chr10	49161157	.	GAAAGAAA	G	5396.25	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=9.764;DP=456;FS=2.481;HRun=0;HaplotypeScore=141.0594;InbreedingCoeff=0.6897;MQ=50.80;MQ0=22;MQRankSum=-1.866;QD=41.51;ReadPosRankSum=2.039;VQSLOD=5.0032;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:19:54.18:0,54,1445	0/0:6,0:6:17.65:0,18,387	0/0:9,0:6:18.03:0,18,265	0/0:10,0:6:17.99:0,18,278	0/0:18,0:18:45.01:0,45,941	0/1:13,0:12:30.80:64,0,31	0/1:15,0:14:41.92:42,0,131	0/0:33,0:30:84.25:0,84,1702	0/1:12,0:11:28.47:28,0,111	0/0:24,0:23:65.88:0,66,1463	0/0:18,0:17:49.63:0,50,939	0/0:8,0:6:18.06:0,18,478	0/0:8,0:8:24.08:0,24,558	0/0:17,0:17:36.32:0,36,795	0/0:18,0:16:44.64:0,45,1195	1/1:8,7:14:42.14:1005,42,0	0/0:20,0:19:44.06:0,44,621	0/0:23,0:21:58.55:0,59,1352	1/1:27,3:29:84.23:1427,84,0	1/1:9,2:11:33.11:689,33,0	1/1:6,0:6:15.05:335,15,0	0/0:7,0:7:20.96:0,21,363	0/0:18,0:17:51.04:0,51,1144	0/0:15,0:14:42.14:0,42,1049	0/0:16,0:16:47.34:0,47,862	0/0:20,0:20:52.98:0,53,1195	1/1:18,10:25:75.25:1806,75,0	0/0:15,0:14:42.14:0,42,875
chr10	49161161	.	GAAA	G	4107.19	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=9.728;DP=448;FS=6.351;HRun=3;HaplotypeScore=112.5451;InbreedingCoeff=0.9854;MQ=55.78;MQ0=17;MQRankSum=-4.086;QD=43.23;ReadPosRankSum=-0.167;VQSLOD=2.6329;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:20:57.14:0,57,1029	0/0:5,0:5:15.05:0,15,251	0/0:10,0:7:21.01:0,21,243	0/0:12,0:8:21:0,21,298	0/0:18,0:18:51.06:0,51,780	0/0:9,0:9:25.06:0,25,138	0/0:14,0:13:32.69:0,33,251	0/0:30,0:28:83.99:0,84,1237	0/0:9,0:8:21.82:0,22,171	0/0:24,0:23:65.25:0,65,1121	0/0:18,0:17:51.16:0,51,802	0/0:7,0:6:17.65:0,18,297	0/0:10,0:10:30.09:0,30,472	0/0:16,0:16:41.98:0,42,638	0/0:18,0:16:44.64:0,45,784	1/1:13,2:14:42.14:698,42,0	0/0:18,0:17:42.06:0,42,552	0/0:24,0:22:63.17:0,63,1049	1/1:4,26:30:90.17:1282,90,0	1/1:12,3:15:44.81:630,45,0	1/1:4,2:6:15.05:244,15,0	0/0:6,0:6:17.97:0,18,228	0/0:18,0:17:51.16:0,51,885	0/0:15,0:14:40.95:0,41,734	0/0:18,0:18:48.61:0,49,757	0/0:18,0:18:48.63:0,49,877	1/1:19,10:26:77.96:1254,78,0	0/0:15,0:14:42.14:0,42,713
chr10	49161164	.	A	AG	2914.83	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=10.174;DP=453;FS=3.932;HRun=1;HaplotypeScore=101.7814;InbreedingCoeff=0.9862;MQ=57.40;MQ0=13;MQRankSum=-4.454;QD=29.15;ReadPosRankSum=-0.742;VQSLOD=3.2186;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:21:57.09:0,57,696	0/0:5,0:5:15.01:0,15,175	0/0:10,0:8:24.02:0,24,263	0/0:12,0:8:20.98:0,21,251	0/0:18,0:18:50.97:0,51,580	0/0:8,0:8:24.07:0,24,269	0/0:15,0:14:36.57:0,37,418	0/0:31,0:29:77.87:0,78,897	0/0:9,0:8:24.05:0,24,271	0/0:24,0:24:64.99:0,65,803	0/0:18,0:17:51.12:0,51,639	0/0:7,0:6:17.97:0,18,210	0/0:10,0:10:29.89:0,30,361	0/0:17,0:17:45.13:0,45,561	0/0:17,0:15:44.92:0,45,487	1/1:12,5:16:44.91:447,45,0	0/0:16,0:16:42.14:0,42,538	0/0:24,0:22:63.03:0,63,724	1/1:30,0:30:90.09:1172,90,0	1/1:7,9:16:45.75:513,46,0	1/1:5,3:8:15.05:201,15,0	0/0:6,0:6:17.99:0,18,211	0/0:19,0:18:54.15:0,54,668	0/0:15,0:14:39.94:0,40,475	0/0:19,0:19:48.16:0,48,618	0/0:17,0:17:48.63:0,49,622	1/1:24,5:27:77.84:756,78,0	0/0:14,0:14:42.14:0,42,543
chr10	49161246	.	C	CTCT	6326.44	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=7.715;DP=545;FS=26.055;HRun=0;HaplotypeScore=82.8189;InbreedingCoeff=0.9989;MQ=81.02;MQ0=1;MQRankSum=-7.558;QD=60.25;ReadPosRankSum=-0.670;VQSLOD=3.6467;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:90.19:0,90,1514	0/0:7,0:7:21.07:0,21,355	0/0:18,0:18:51.08:0,51,814	0/0:17,0:17:48.12:0,48,756	0/0:20,0:20:54.18:0,54,919	0/0:25,0:25:72.25:0,72,1269	0/0:25,0:25:75.26:0,75,1308	0/0:21,0:21:57.19:0,57,999	0/0:23,0:23:66.23:0,66,1164	0/0:16,0:16:45.10:0,45,710	0/0:23,0:23:66.19:0,66,1089	0/0:13,0:13:39.13:0,39,687	0/0:14,0:14:42.11:0,42,667	0/0:31,0:31:93.30:0,93,1596	0/0:14,0:14:36.08:0,36,576	1/1:2,19:21:57.20:1341,57,0	0/0:28,0:28:81.22:0,81,1335	0/0:20,0:20:60.20:0,60,1043	1/1:8,11:19:57.13:1120,57,0	1/1:3,20:24:72.10:1516,72,0	1/1:1,20:20:51.09:1152,51,0	0/0:13,0:13:33.11:0,33,576	0/0:12,0:12:36.12:0,36,619	0/0:17,0:17:48.14:0,48,816	0/0:16,0:16:48.16:0,48,801	0/0:20,0:20:54.14:0,54,919	1/1:2,18:20:54.13:1198,54,0	0/0:15,0:15:45.15:0,45,793
chr10	49161449	.	C	CGG	6075.83	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-11.563;DP=658;FS=1.261;HRun=4;HaplotypeScore=98.9531;InbreedingCoeff=0.9987;MQ=83.03;MQ0=1;MQRankSum=-3.783;QD=47.84;ReadPosRankSum=1.087;VQSLOD=3.5426;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,147,1936	0/0:9,0:9:27.09:0,27,358	0/0:19,0:19:51.16:0,51,667	0/0:26,0:26:60.17:0,60,761	0/0:25,0:25:66.21:0,66,879	0/0:23,0:23:66.16:0,66,845	0/0:19,0:19:48.15:0,48,635	0/0:33,0:33:81.18:0,81,1037	0/0:31,0:31:81.26:0,81,1080	0/0:25,0:25:72.24:0,72,959	0/0:14,0:14:36.12:0,36,479	0/0:18,0:18:51.15:0,51,664	0/0:21,0:21:51.16:0,51,680	0/0:29,0:29:81.26:0,81,1076	0/0:20,0:20:51.16:0,51,680	1/1:1,19:20:54.19:971,54,0	0/0:28,0:28:69.18:0,69,900	0/0:30,0:30:78.22:0,78,1018	1/1:2,18:22:60.19:1035,60,0	1/1:2,24:26:72.25:1279,72,0	1/1:0,25:24:66.23:1173,66,0	0/0:11,0:11:33.11:0,33,440	0/0:22,0:22:60.19:0,60,800	0/0:29,0:29:78.26:0,78,1039	0/0:19,0:19:54.18:0,54,720	0/0:19,0:18:57.14:0,57,740	1/1:3,31:34:90.31:1617,90,0	0/0:8,0:8:21.07:0,21,280
chr10	49161546	.	TCCCCCCCCC	T	6393.47	PASS	AB=0.735;AC=41;AF=0.759;AN=54;BaseQRankSum=4.213;DP=457;FS=14.217;HRun=12;HaplotypeScore=148.7592;InbreedingCoeff=0.7074;MQ=50.92;MQ0=35;MQRankSum=-4.618;QD=18.53;ReadPosRankSum=5.691;VQSLOD=0.5408;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:20:44.50:0,45,1125	0/0:8,0:8:10.64:0,11,426	0/0:25,0:7:21.07:0,21,588	0/0:38,0:16:42.84:0,43,965	1/1:11,7:18:3.90:81,4,0	0/1:3,10:13:0:0,0,0	1/1:2,6:7:3.01:66,3,0	1/1:4,31:33:75.15:1739,75,0	1/1:3,12:16:4.65:145,5,0	1/1:9,4:11:32.48:500,32,0	1/1:4,4:8:3:83,3,0	1/1:13,4:16:17.44:229,17,0	1/1:12,0:14:19.87:167,20,0	1/1:11,3:11:8.51:170,9,0	0/0:7,0:6:15.05:0,15,531	1/1:15,6:20:17.81:353,18,0	1/1:4,5:10:14.91:244,15,0	1/1:3,1:4:2.48:9,2,0	1/1:8,2:11:26.06:333,26,0	1/1:11,5:17:15.04:361,15,0	1/1:4,3:6:0.47:1,0,0	1/1:17,0:17:17.26:160,17,0	0/1:12,3:12:0:0,0,0	0/1:10,1:11:0:0,0,0	./.	1/1:13,6:19:53.05:741,53,0	1/1:14,5:21:35.25:477,35,0	1/1:3,6:9:21.06:534,21,0
chr10	49161549	.	C	CT	2021.88	PASS	AB=0.726;AC=38;AF=0.731;AN=52;BaseQRankSum=6.964;DP=428;FS=7.603;HRun=0;HaplotypeScore=122.9280;InbreedingCoeff=0.6993;MQ=50.48;MQ0=42;MQRankSum=-3.676;QD=6.76;ReadPosRankSum=5.354;VQSLOD=3.1085;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:17:44.24:0,44,348	0/0:6,0:6:9.48:0,9,96	0/0:25,0:7:13.72:0,14,160	0/0:38,0:16:20.91:0,21,305	1/1:9,8:16:2.74:12,3,0	./.	1/1:10,0:7:2.68:11,3,0	1/1:31,0:29:40.91:191,41,0	1/1:17,1:16:3.88:12,4,0	1/1:4,9:11:27.13:222,27,0	1/1:7,1:6:2.98:23,3,0	1/1:8,11:15:19.96:163,20,0	1/1:3,11:13:20.88:198,21,0	1/1:7,7:9:7.97:49,8,0	0/0:7,0:6:14.99:0,15,128	1/1:10,10:18:15.06:82,15,0	1/1:9,0:10:7.95:54,8,0	1/1:3,0:3:2.98:23,3,0	1/1:4,6:9:19.43:189,19,0	1/1:12,7:16:13.63:91,14,0	0/1:6,1:5:0:0,0,0	1/1:2,13:13:17.32:151,17,0	0/1:4,11:12:0:0,0,0	0/0:5,0:9:0:0,0,0	./.	1/1:6,12:18:45.22:391,45,0	1/1:13,11:20:32.51:265,33,0	1/1:9,1:8:14.74:54,15,0
chr10	49161592	.	CTGTGTGTGTGTGTG	C	2901.96	PASS	AB=0.839;AC=22;AF=0.500;AN=44;BaseQRankSum=3.280;DP=479;FS=0.000;HRun=0;HaplotypeScore=215.5551;InbreedingCoeff=0.3732;MQ=31.42;MQ0=35;MQRankSum=-4.583;QD=11.16;ReadPosRankSum=2.623;VQSLOD=2.4955;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:33.58:0,34,1760	0/0:1,0:1:3.01:0,3,197	./.	./.	1/1:18,8:27:2.85:88,3,0	0/0:15,0:16:23.59:0,24,332	0/0:18,0:12:3.63:0,4,40	0/1:30,0:30:14.50:76,0,15	0/0:18,0:18:9.48:0,9,97	1/1:14,5:17:13.64:649,14,0	0/0:13,3:15:0.17:0,0,0	./.	1/1:21,3:23:11.35:352,11,0	1/1:9,3:13:3.01:115,3,0	0/0:10,0:9:9.03:0,9,460	0/1:12,0:20:27.06:283,0,27	0/1:17,0:16:2.93:27,0,3	1/1:12,2:8:1.53:115,2,0	1/1:13,0:10:2.69:144,3,0	0/1:13,0:18:0:0,0,0	0/0:16,0:9:0.47:0,0,1	./.	./.	0/0:8,0:9:0.94:0,1,1	./.	1/1:19,2:20:7.37:306,7,0	1/1:19,0:28:26.75:766,27,0	1/1:5,1:5:3.01:116,3,0
chr10	49162475	.	T	TA	3041.46	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-12.531;DP=576;FS=3.221;HRun=6;HaplotypeScore=49.4095;InbreedingCoeff=0.9610;MQ=72.28;MQ0=0;MQRankSum=0.104;QD=30.11;ReadPosRankSum=0.360;VQSLOD=4.1648;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:87.16:0,87,877	0/0:9,0:9:27.06:0,27,275	0/0:13,0:13:29.57:0,30,269	0/0:3,0:3:9.02:0,9,91	0/0:24,0:24:63.14:0,63,643	0/0:26,0:26:72.16:0,72,734	0/0:14,0:14:33.07:0,33,337	0/0:31,0:30:78.14:0,78,783	0/0:14,0:14:33.07:0,33,337	0/0:26,0:26:66.14:0,66,666	0/0:18,0:18:51.11:0,51,520	0/0:10,0:10:30.07:0,30,306	0/0:19,0:19:54.10:0,54,543	0/0:18,0:18:51.11:0,51,520	0/0:15,0:15:39.08:0,39,398	1/1:1,18:19:54.17:679,54,0	0/0:36,0:36:99:0,105,1071	0/0:29,0:29:81.18:0,81,826	1/1:0,11:11:33.11:415,33,0	1/1:4,27:31:81.18:984,81,0	1/1:2,2:4:6.02:75,6,0	0/0:13,0:13:36.08:0,36,367	0/0:25,0:25:69.15:0,69,704	0/0:20,0:20:57.13:0,57,581	0/0:34,0:33:96.21:0,96,979	0/0:37,0:37:99:0,102,1041	1/1:7,29:36:84.27:1057,84,0	0/0:12,0:12:30.06:0,30,306
chr10	49163649	.	GA	G	3911.98	PASS	AB=0.517;AC=9;AF=0.161;AN=56;BaseQRankSum=10.544;DP=673;FS=0.000;HRun=1;HaplotypeScore=67.6314;InbreedingCoeff=0.8844;MQ=84.90;MQ0=0;MQRankSum=-2.566;QD=36.22;ReadPosRankSum=0.775;VQSLOD=3.7671;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,130,1791	0/0:9,0:9:27.06:0,27,380	0/0:35,0:34:86.24:0,86,1182	0/0:19,0:18:47.64:0,48,579	0/0:15,0:15:41.95:0,42,576	0/0:14,0:14:42.09:0,42,558	0/0:22,0:22:66.21:0,66,963	0/0:35,0:35:99:0,102,1371	0/0:20,0:20:57.19:0,57,846	0/0:29,0:29:87.25:0,87,1245	0/0:26,0:26:75.04:0,75,1089	0/0:26,0:26:78.24:0,78,1124	0/0:25,0:25:67.16:0,67,934	0/0:24,0:24:72.22:0,72,1025	0/0:39,0:39:99:0,111,1639	1/1:0,25:25:75.25:1048,75,0	0/0:26,0:26:78.20:0,78,1080	0/0:11,0:11:33.09:0,33,472	1/1:0,19:19:57.07:684,57,0	0/1:1,14:15:8.65:380,0,9	1/1:0,19:19:48.11:670,48,0	0/0:22,0:22:51.86:0,52,818	0/0:26,0:26:72.14:0,72,1004	0/0:34,0:34:99:0,99,1436	0/0:26,0:26:75.25:0,75,1114	0/0:26,0:26:75.17:0,75,1093	1/1:0,30:30:81.27:1131,81,0	0/0:11,0:11:33.07:0,33,468
chr10	49165091	.	CT	C	3425.98	PASS	AB=0.957;AC=11;AF=0.196;AN=56;BaseQRankSum=15.537;DP=717;FS=8.824;HRun=8;HaplotypeScore=83.6212;InbreedingCoeff=0.9230;MQ=83.20;MQ0=0;MQRankSum=-3.940;QD=21.82;ReadPosRankSum=1.308;VQSLOD=3.7492;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:41,1:42:88.37:0,88,1338	0/0:19,0:19:57.16:0,57,675	0/0:21,1:22:34.12:0,34,450	0/1:21,1:22:2.96:3,0,389	0/0:36,0:36:93.29:0,93,1123	0/0:20,0:20:57.17:0,57,689	0/0:20,0:20:60.17:0,60,714	0/0:34,0:34:93.28:0,93,1112	0/0:22,0:22:66.20:0,66,797	0/0:26,0:26:69.21:0,69,833	0/0:21,0:21:63.19:0,63,761	0/0:20,0:20:54.17:0,54,652	0/0:27,0:27:81.25:0,81,979	0/0:26,0:26:63.19:0,63,761	0/0:40,0:40:99:0,111,1340	1/1:1,24:25:72.12:695,72,0	0/0:35,0:35:93.28:0,93,1113	0/0:13,0:13:33.10:0,33,398	1/1:2,16:18:48.07:464,48,0	1/1:4,18:22:54.08:521,54,0	1/1:3,26:29:69.05:666,69,0	0/0:13,0:13:36.11:0,36,435	0/0:25,0:25:57.17:0,57,679	0/0:31,0:31:84.25:0,84,1003	0/0:27,0:27:72.20:0,72,853	0/0:27,0:27:69.20:0,69,824	1/1:3,37:41:99:1078,113,0	0/0:14,0:14:39.11:0,39,460
chr10	49165159	.	G	GCTCTAGTC	8664.65	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-0.504;DP=680;FS=6.412;HRun=0;HaplotypeScore=170.3426;InbreedingCoeff=0.9978;MQ=90.14;MQ0=0;MQRankSum=-12.054;QD=80.98;ReadPosRankSum=-3.109;VQSLOD=4.2513;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,102,2718	0/0:13,0:13:36.12:0,36,997	0/0:23,0:23:56.86:0,57,1363	0/0:33,0:33:53.84:0,54,1755	0/0:32,0:32:96.33:0,96,2611	0/0:33,0:33:96.32:0,96,2597	0/0:28,0:28:72.25:0,72,1980	0/0:33,0:33:93.31:0,93,2394	0/0:17,0:17:51.18:0,51,1408	0/0:20,0:20:54.19:0,54,1497	0/0:21,0:21:60.18:0,60,1512	0/0:23,0:23:60.21:0,60,1662	0/0:27,0:27:75.24:0,75,1962	0/0:15,0:15:45.15:0,45,1244	0/0:41,0:41:99:0,120,3280	1/1:10,13:23:60.19:2211,60,0	0/0:30,0:30:84.26:0,84,2147	0/0:14,0:14:39.10:0,39,1018	1/1:8,3:11:30.57:1047,31,0	1/1:5,17:23:42.14:1635,42,0	1/1:14,3:17:17.70:564,18,0	0/0:26,0:26:72.25:0,72,1964	0/0:17,0:17:48.14:0,48,1174	0/0:28,0:28:81.20:0,81,2078	0/0:17,0:17:45.15:0,45,1215	0/0:30,0:30:87.30:0,87,2396	1/1:17,15:33:87.28:3207,87,0	0/0:13,0:13:36.12:0,36,959
chr10	49165311	.	G	GTT	6233.18	PASS	AB=0.851;AC=46;AF=0.821;AN=56;BaseQRankSum=1.032;DP=617;FS=10.390;HRun=14;HaplotypeScore=117.0428;InbreedingCoeff=0.1282;MQ=68.09;MQ0=2;MQRankSum=-2.442;QD=11.01;ReadPosRankSum=-1.862;VQSLOD=2.3375;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:29,1:31:56.85:57,0,248	0/1:5,0:5:14.11:14,0,41	0/1:29,0:20:23.50:23,0,67	0/0:21,0:12:1.11:0,1,17	1/1:8,19:32:58.86:536,59,0	1/1:6,22:32:32.52:355,33,0	1/1:5,17:26:36.48:367,36,0	1/1:24,2:24:36.80:314,37,0	0/1:10,8:18:14.19:73,0,14	0/1:20,0:21:10.24:297,0,10	1/1:18,4:24:52.04:494,52,0	0/1:2,9:12:9.93:95,0,10	1/1:17,0:16:12.75:97,13,0	1/1:5,13:19:3.90:41,4,0	0/0:22,0:29:36.98:0,37,310	1/1:16,0:16:20.91:163,21,0	1/1:7,17:26:23.43:269,23,0	1/1:3,6:10:11.52:115,12,0	1/1:11,1:12:20.19:134,20,0	1/1:32,0:33:71.83:451,72,0	1/1:7,0:9:2.90:16,3,0	1/1:6,14:20:32.80:295,33,0	1/1:5,19:26:1.59:258,2,0	1/1:6,17:26:5.37:277,5,0	1/1:18,3:23:54.49:477,54,0	1/1:9,6:33:65.89:601,66,0	1/1:32,0:32:55.10:318,55,0	1/1:5,0:5:11.95:96,12,0
chr10	49165312	.	T	TTGTTGTTGTTG	8533.69	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-5.877;DP=628;FS=14.625;HRun=0;HaplotypeScore=213.9334;InbreedingCoeff=0.9492;MQ=67.04;MQ0=2;MQRankSum=-8.378;QD=76.88;ReadPosRankSum=1.582;VQSLOD=3.5528;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:31:86.94:0,87,2304	0/0:7,0:7:9.50:0,9,306	0/0:28,0:19:18.32:0,18,756	0/0:22,0:12:28.80:0,29,433	0/0:32,0:32:68.29:0,68,1274	0/0:34,0:34:43.60:0,44,832	0/0:27,0:27:45.91:0,46,905	0/0:25,0:23:36.51:0,37,874	0/0:17,0:17:32.87:0,33,612	0/0:22,0:22:54.04:0,54,1250	0/0:24,0:24:62.19:0,62,967	0/0:11,0:11:12.02:0,12,171	0/0:17,0:16:29.99:0,30,602	0/0:19,0:19:12.04:0,12,310	0/0:29,0:29:69.67:0,70,1761	1/1:16,0:16:12.76:1220,13,0	0/0:26,0:26:41.91:0,42,932	0/0:10,0:10:18.06:0,18,355	1/1:9,1:11:23.11:695,23,0	1/1:26,9:37:91.01:3284,91,0	1/1:9,0:9:11.96:285,12,0	0/0:20,0:20:38.12:0,38,800	0/0:28,0:28:31.10:0,31,527	0/0:26,0:26:38.91:0,39,897	0/0:23,0:23:47.12:0,47,849	0/0:33,0:33:59.71:0,60,1009	1/1:31,6:36:89.79:3050,90,0	0/0:5,0:5:12.35:0,12,127
chr10	49165313	.	T	TGTTGTTGTTG	7213.18	PASS	AB=0.861;AC=7;AF=0.125;AN=56;BaseQRankSum=-5.188;DP=623;FS=39.944;HRun=0;HaplotypeScore=205.2891;InbreedingCoeff=0.4231;MQ=66.34;MQ0=2;MQRankSum=-8.840;QD=65.57;ReadPosRankSum=4.171;VQSLOD=3.0469;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:31:87.16:0,87,2322	0/0:7,0:7:16.27:0,16,341	0/0:27,0:18:18.27:0,18,789	0/0:22,0:12:28.89:0,29,448	0/0:32,0:32:81.66:0,82,1434	0/0:34,0:34:49.30:0,49,901	0/0:27,0:27:47.01:0,47,930	0/0:23,0:21:56.88:0,57,950	0/0:18,0:18:33.08:0,33,649	0/0:23,0:23:61.70:0,62,1360	0/0:24,0:24:67.19:0,67,1039	0/0:11,0:11:12.04:0,12,215	0/0:16,0:15:39.53:0,40,700	0/0:17,0:17:12.04:0,12,309	0/0:28,0:28:69.69:0,70,1781	0/1:11,3:14:7.46:1104,0,7	0/0:26,0:26:42.12:0,42,955	0/0:10,0:10:18.05:0,18,366	1/1:11,1:13:0.83:550,1,0	0/1:31,5:37:19.87:2718,0,20	0/1:8,1:9:21.17:238,0,21	0/0:20,0:20:50.97:0,51,892	0/0:28,0:28:41.33:0,41,625	0/0:26,0:26:39.12:0,39,927	0/0:23,0:23:61.63:0,62,1009	0/0:33,0:33:71:0,71,1135	1/1:31,5:35:36.80:2603,37,0	0/0:6,0:6:12.36:0,12,135
chr10	49165395	.	CT	C	3849.47	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=12.135;DP=569;FS=1.730;HRun=4;HaplotypeScore=64.5280;InbreedingCoeff=0.9938;MQ=74.21;MQ0=1;MQRankSum=-1.777;QD=32.62;ReadPosRankSum=-1.603;VQSLOD=3.5737;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:26:75.25:0,75,1050	0/0:13,0:13:39.13:0,39,546	0/0:19,0:19:14.57:0,15,630	0/0:9,0:8:18.04:0,18,221	0/0:22,0:22:63.21:0,63,882	0/0:15,0:15:39.13:0,39,545	0/0:17,0:17:51.16:0,51,697	0/0:26,0:25:72.23:0,72,981	0/0:20,0:20:46.10:0,46,784	0/0:37,0:37:99:0,111,1552	0/0:13,0:13:39.13:0,39,546	0/0:19,0:19:51.17:0,51,714	0/0:20,0:20:60.20:0,60,839	0/0:18,0:18:42.14:0,42,585	0/0:23,0:23:69.23:0,69,966	1/1:0,23:23:69.21:828,69,0	0/0:23,0:23:63.21:0,63,882	0/0:14,0:14:42.14:0,42,587	1/1:1,21:22:63.19:755,63,0	1/1:1,26:27:72.18:845,72,0	1/1:1,12:13:30.05:344,30,0	0/0:16,0:16:48.16:0,48,672	0/0:26,0:26:75.20:0,75,1013	0/0:18,0:18:54.18:0,54,752	0/0:23,0:23:66.22:0,66,924	0/0:20,0:20:60.19:0,60,825	1/1:0,33:33:90.28:1078,90,0	0/0:13,0:13:39.13:0,39,546
chr10	49167115	.	T	TAGG	9484	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=4.524;DP=711;FS=1.558;HRun=0;HaplotypeScore=103.1695;InbreedingCoeff=0.9999;MQ=79.82;MQ0=0;MQRankSum=-1.580;QD=60.03;ReadPosRankSum=0.999;VQSLOD=6.3490;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,141,2457	0/0:13,0:13:39.11:0,39,663	0/0:23,0:23:66.15:0,66,1074	0/0:16,0:16:41.59:0,42,641	0/0:27,0:27:81.09:0,81,1399	0/0:17,0:17:51.17:0,51,932	0/0:32,0:32:93.27:0,93,1629	0/0:20,0:20:57.18:0,57,1028	0/0:33,0:33:99:0,99,1757	0/0:25,0:25:72.23:0,72,1288	0/0:13,0:13:39.11:0,39,638	0/0:27,0:27:81.23:0,81,1373	0/0:26,0:26:75.21:0,75,1329	0/0:32,0:32:96.29:0,96,1658	0/0:33,0:33:96.29:0,96,1684	1/1:1,31:33:90.31:2211,90,0	0/0:21,0:21:63.20:0,63,1140	0/0:27,0:27:78.22:0,78,1359	1/1:3,16:19:57.15:1292,57,0	1/1:2,25:28:75.13:1683,75,0	1/1:1,40:44:93.25:2261,93,0	0/0:22,0:22:63.15:0,63,1055	0/0:24,0:24:66.21:0,66,1182	0/0:18,0:18:54.19:0,54,1005	0/0:14,0:14:42.13:0,42,750	0/0:28,0:28:81.25:0,81,1412	1/1:2,32:34:84.29:2037,84,0	0/0:15,0:15:45.13:0,45,799
chr10	49168368	.	TCC	T	27171.09	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=12.644;DP=830;FS=2.366;HRun=4;HaplotypeScore=116.1910;InbreedingCoeff=0.9981;MQ=63.77;MQ0=2;MQRankSum=-1.768;QD=40.61;ReadPosRankSum=4.458;VQSLOD=3.8733;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:63,0:63:99:0,184,3363	0/0:7,0:6:18.06:0,18,337	0/0:31,0:30:46.34:0,46,1488	0/0:28,0:27:66.23:0,66,1216	1/1:2,24:26:60.20:884,60,0	1/1:0,29:29:81.27:1193,81,0	1/1:2,32:34:87.29:1281,87,0	1/1:2,25:27:75.25:1088,75,0	1/1:2,23:25:69.23:1016,69,0	1/1:1,37:38:99:1647,114,0	1/1:0,22:22:63.21:928,63,0	1/1:0,23:22:57.19:839,57,0	1/1:3,35:38:99:1530,105,0	1/1:0,29:29:84.28:1237,84,0	0/0:32,0:32:96.33:0,96,1786	1/1:0,32:32:90.30:1326,90,0	1/1:0,34:34:99:1502,102,0	1/1:0,38:38:99:1585,108,0	1/1:2,16:16:42.13:601,42,0	1/1:0,37:37:99:1502,102,0	1/1:2,26:28:75.25:1105,75,0	1/1:0,26:26:75.21:1080,75,0	1/1:0,19:19:57.19:839,57,0	1/1:1,32:33:87.29:1281,87,0	1/1:0,27:26:78.26:1149,78,0	1/1:0,39:39:99:1658,114,0	1/1:3,31:34:90.30:1325,90,0	1/1:0,13:13:39.13:574,39,0
chr10	49169534	.	GTGACCTTGTTGTGGTAGGTA	G	12406.10	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=10.487;DP=599;FS=1.209;HRun=0;HaplotypeScore=323.8882;InbreedingCoeff=0.6918;MQ=62.08;MQ0=0;MQRankSum=-9.206;QD=27.75;ReadPosRankSum=3.834;VQSLOD=3.0006;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:57:79.51:0,80,5527	0/0:11,0:11:18.06:0,18,933	0/0:20,0:20:21.07:0,21,838	0/0:28,0:27:34.36:0,34,1876	1/1:15,7:22:9.03:332,9,0	1/1:12,2:14:6.02:319,6,0	1/1:15,5:20:6.02:202,6,0	1/1:25,0:25:3:26,3,0	1/1:12,3:15:9.03:470,9,0	1/1:19,2:21:6.02:319,6,0	1/1:7,2:9:3.01:160,3,0	1/1:14,8:22:18.06:958,18,0	1/1:14,8:22:14.99:798,15,0	1/1:11,12:23:30.10:1525,30,0	0/0:36,0:36:69.24:0,69,4668	1/1:7,11:18:26.70:1436,27,0	1/1:22,8:29:20.61:977,21,0	1/1:8,5:13:7.22:476,7,0	1/1:12,1:13:6.02:318,6,0	1/1:13,3:16:9.03:392,9,0	1/1:37,0:37:2.23:93,2,0	1/1:20,8:28:18.06:712,18,0	1/1:8,4:12:9.03:454,9,0	1/1:14,3:17:3.01:160,3,0	1/1:16,3:19:12.04:465,12,0	1/1:18,6:24:21.07:706,21,0	1/1:15,4:19:15.05:626,15,0	1/1:5,3:8:9.03:479,9,0
chr10	49169552	.	GTAT	G	728.77	PASS	AB=0.982;AC=21;AF=0.375;AN=56;BaseQRankSum=12.317;DP=472;FS=2.159;HRun=0;HaplotypeScore=135.5176;InbreedingCoeff=-0.4573;MQ=62.49;MQ0=0;MQRankSum=-9.492;QD=2.72;ReadPosRankSum=5.505;VQSLOD=2.3451;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,132,2992	0/0:12,0:12:24.08:0,24,585	0/0:21,0:20:60.20:0,60,1329	0/0:30,0:30:84.28:0,84,1858	0/1:20,0:20:26.50:27,0,525	0/1:9,1:10:19.47:19,0,228	0/0:14,0:14:11.84:0,12,677	0/0:15,0:15:34.72:0,35,739	0/1:12,0:12:10.94:11,0,571	0/1:13,0:13:45.01:45,0,203	1/1:3,0:3:2.96:19,3,0	0/1:14,0:14:84.31:84,0,169	0/1:16,1:17:63.49:63,0,311	0/1:22,0:22:99:113,0,539	0/0:36,0:36:99:0,102,2473	0/1:14,0:14:99:131,0,185	0/1:25,0:24:55.10:55,0,807	0/1:10,0:10:31.62:32,0,289	0/1:6,0:6:26.08:26,0,194	0/1:10,0:10:13.05:13,0,337	0/0:22,0:22:49.41:0,49,1149	0/1:21,0:21:97.84:98,0,652	0/1:9,0:9:47.47:47,0,155	0/1:12,0:12:0.93:1,0,269	0/1:12,1:13:17.61:18,0,335	0/1:18,1:19:28.95:29,0,739	0/1:12,1:13:16.57:17,0,629	0/1:5,0:5:40.64:41,0,132
chr10	49169554	.	ATG	A	303.24	PASS	AB=0.989;AC=19;AF=0.339;AN=56;BaseQRankSum=13.284;DP=488;FS=0.465;HRun=0;HaplotypeScore=133.6032;InbreedingCoeff=-0.3618;MQ=60.45;MQ0=0;MQRankSum=-8.577;QD=1.21;ReadPosRankSum=6.764;VQSLOD=1.7875;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,129,2507	0/0:8,0:8:24.08:0,24,488	0/0:24,1:24:72.20:0,72,1319	0/0:30,0:31:87.22:0,87,1576	0/1:14,0:14:20.13:20,0,439	0/1:6,0:6:8.99:9,0,168	0/0:18,0:18:9.22:0,9,561	0/1:14,4:18:62.96:63,0,551	0/0:14,0:14:7.51:0,8,485	0/1:9,0:9:2.98:3,0,205	1/1:5,0:5:2.74:12,3,0	0/1:16,0:16:39.12:39,0,165	0/1:23,0:23:30.06:30,0,234	0/1:24,0:24:51.16:51,0,442	0/0:35,0:35:99:0,105,2055	0/1:20,0:20:69.16:69,0,170	0/1:25,0:24:19.14:19,0,608	0/1:13,0:13:8.99:9,0,260	0/1:7,0:7:16.31:16,0,202	0/1:10,0:10:2.95:3,0,281	0/0:32,0:32:48.65:0,49,960	0/1:19,0:19:47.45:47,0,525	0/1:7,0:7:34.23:34,0,107	0/0:15,0:15:2.66:0,3,194	0/1:9,0:9:2.98:3,0,283	0/1:21,0:21:2.88:3,0,673	0/0:15,0:15:6.01:0,6,547	0/1:5,0:5:20.95:21,0,107
chr10	49169708	.	AT	A	7534.61	PASS	AB=0.917;AC=41;AF=0.732;AN=56;BaseQRankSum=2.934;DP=659;FS=1.590;HRun=11;HaplotypeScore=79.0231;InbreedingCoeff=0.9077;MQ=68.03;MQ0=0;MQRankSum=1.451;QD=15.73;ReadPosRankSum=2.186;VQSLOD=5.7536;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:49,1:49:98.56:0,99,1209	0/0:9,0:9:24.06:0,24,256	0/1:10,1:11:3.30:3,0,147	0/0:16,1:16:16.39:0,16,184	1/1:2,12:15:34.98:277,35,0	0/0:5,0:25:39.87:0,40,200	0/0:3,0:25:48.75:0,49,272	1/1:5,22:27:65.90:542,66,0	0/0:8,0:27:57.20:0,57,313	1/1:3,17:20:24.94:411,25,0	1/1:2,12:14:29.93:246,30,0	1/1:5,23:28:65.92:542,66,0	1/1:3,21:25:58.97:474,59,0	1/1:6,26:33:18.98:556,19,0	0/0:27,0:27:47.62:0,48,694	1/1:3,0:24:23.27:86,23,0	1/1:0,35:35:95.89:788,96,0	1/1:4,30:34:86.88:714,87,0	1/1:5,0:20:22.86:71,23,0	1/1:2,1:18:31.51:107,32,0	1/1:1,0:20:34.62:100,35,0	1/1:4,14:18:3.96:239,4,0	1/1:2,13:15:32.95:271,33,0	1/1:6,36:42:46.88:797,47,0	1/1:3,22:25:56.92:468,57,0	1/1:3,25:29:74.88:612,75,0	1/1:4,0:17:20.36:59,20,0	1/1:2,7:9:20.97:172,21,0
chr10	49169951	.	A	ATTT	5210.75	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-8.629;DP=608;FS=12.640;HRun=4;HaplotypeScore=82.8769;InbreedingCoeff=0.9965;MQ=67.93;MQ0=1;MQRankSum=-2.598;QD=48.25;ReadPosRankSum=-0.357;VQSLOD=3.3891;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,129,1912	0/0:12,0:12:33.10:0,33,485	0/0:9,0:8:21.07:0,21,304	0/0:10,0:10:17.61:0,18,217	0/0:20,0:20:51.14:0,51,737	0/0:18,0:18:54.13:0,54,758	0/0:24,0:24:69.19:0,69,1012	0/0:24,0:24:48.14:0,48,715	0/0:18,0:18:54.18:0,54,825	0/0:19,0:19:54.17:0,54,809	0/0:15,0:15:45.15:0,45,690	0/0:25,0:25:72.24:0,72,1102	0/0:28,0:28:75.20:0,75,1085	0/0:32,0:32:96.33:0,96,1470	0/0:14,0:14:36.12:0,36,552	1/1:1,21:23:51.18:1135,51,0	0/0:34,0:34:99:0,99,1497	0/0:22,0:22:60.20:0,60,920	1/1:6,13:20:39.57:749,40,0	1/1:2,18:20:48.13:1025,48,0	1/1:2,18:19:48.16:1031,48,0	0/0:23,0:23:63.21:0,63,966	0/0:12,0:12:27.08:0,27,392	0/0:28,0:28:84.20:0,84,1236	0/0:24,0:24:63.19:0,63,942	0/0:35,0:35:99:0,99,1479	1/1:1,22:25:57.20:1272,57,0	0/0:10,0:10:30.10:0,30,459
chr10	49170594	.	A	ACCACTGTCGATTAGAAGCTC	28677.33	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=4.114;DP=823;FS=3.032;HRun=0;HaplotypeScore=407.5501;InbreedingCoeff=0.9925;MQ=88.36;MQ0=0;MQRankSum=-16.358;QD=179.23;ReadPosRankSum=-0.681;VQSLOD=3.9851;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:69,0:69:99:0,184,9337	0/0:4,0:4:12.04:0,12,504	0/0:38,0:38:62.15:0,62,3726	0/0:30,0:29:76.04:0,76,2968	0/0:21,0:21:63.17:0,63,3125	0/0:16,0:16:48.16:0,48,2204	0/0:27,0:27:78.27:0,78,3850	0/0:35,0:35:96.32:0,96,4551	0/0:17,0:17:45.14:0,45,2194	0/0:35,0:35:99:0,102,4686	0/0:10,0:10:27.08:0,27,1259	0/0:23,0:23:63.22:0,63,3406	0/0:33,0:33:93.30:0,93,4785	0/0:32,0:32:87.30:0,87,4749	0/0:40,0:40:99:0,117,5824	1/1:31,15:48:99:10436,129,0	0/0:54,0:54:99:0,160,7782	0/0:25,0:25:72.18:0,72,3566	1/1:9,1:14:39.08:2254,39,0	1/1:21,7:31:66.23:4673,66,0	1/1:19,2:30:45.15:3190,45,0	0/0:21,0:21:63.22:0,63,3408	0/0:20,0:20:60.19:0,60,2991	0/0:48,0:48:99:0,141,6555	0/0:24,0:24:69.22:0,69,3471	0/0:31,0:31:90.27:0,90,4409	1/1:20,13:37:99:8124,99,0	0/0:10,0:10:30.10:0,30,1612
chr10	49170844	.	A	AAAACAAAC	13601.75	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-1.071;DP=733;FS=14.640;HRun=0;HaplotypeScore=193.7882;InbreedingCoeff=0.9886;MQ=64.34;MQ0=6;MQRankSum=-2.237;QD=27.99;ReadPosRankSum=0.318;VQSLOD=3.4643;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:66.18:0,66,1520	0/0:8,0:8:21.06:0,21,433	0/0:31,0:24:17.99:0,18,227	0/0:30,0:27:14.48:0,14,233	1/1:14,12:28:42.09:1099,42,0	0/0:6,0:24:36.12:0,36,670	0/0:9,0:16:11.89:0,12,146	1/1:29,0:35:24.02:285,24,0	0/0:7,0:22:30.10:0,30,557	1/1:12,17:31:63.19:1834,63,0	1/1:4,17:23:51.17:1905,51,0	1/1:4,0:18:35.92:293,36,0	1/1:12,0:27:32.85:261,33,0	1/1:18,0:27:32.73:257,33,0	0/0:31,0:31:42.14:0,42,982	0/0:22,0:22:36.11:0,36,784	1/1:23,12:37:31.92:1143,32,0	1/1:20,5:26:35.72:1097,36,0	1/1:15,0:22:26.96:243,27,0	1/1:18,0:31:41.88:364,42,0	1/1:13,0:25:26.94:220,27,0	0/0:26,0:26:42.12:0,42,907	1/1:10,0:29:41.51:323,42,0	1/1:8,0:26:35.92:293,36,0	1/1:8,17:27:45.15:1801,45,0	1/1:9,12:23:39.12:1119,39,0	1/1:13,0:33:50.87:412,51,0	1/1:7,7:14:18.06:653,18,0
chr10	49171072	.	TAA	T	2590.22	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=13.120;DP=600;FS=30.503;HRun=10;HaplotypeScore=93.7312;InbreedingCoeff=0.9332;MQ=70.51;MQ0=0;MQRankSum=-2.612;QD=25.15;ReadPosRankSum=0.961;VQSLOD=1.3463;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:28:59.69:0,60,911	0/0:9,0:9:27.09:0,27,429	0/0:19,0:16:8.91:0,9,273	0/0:13,0:13:1.88:0,2,174	0/0:31,0:31:93.32:0,93,1474	0/0:23,0:23:60.20:0,60,951	0/0:7,0:7:18.06:0,18,286	0/0:31,0:31:78.27:0,78,1238	0/0:8,0:8:18.06:0,18,286	0/0:22,0:22:60.14:0,60,891	0/0:21,0:23:69.18:0,69,1029	0/0:23,0:23:60.19:0,60,928	0/0:25,0:25:69.24:0,69,1091	0/0:24,0:24:66.22:0,66,1022	0/0:25,0:25:69.24:0,69,1088	1/1:0,23:23:63.09:702,63,0	0/0:31,0:31:82.06:0,82,1247	0/0:18,0:18:40.95:0,41,614	1/1:3,18:21:54.11:590,54,0	1/1:1,18:19:42.09:468,42,0	1/1:1,9:10:15.04:167,15,0	0/0:28,0:29:80.76:0,81,1242	0/0:28,0:29:81.27:0,81,1267	0/0:13,0:13:39.09:0,39,588	0/0:25,0:25:63.21:0,63,995	0/0:24,0:25:72.23:0,72,1084	1/1:3,27:30:75.18:836,75,0	0/0:15,0:15:45.12:0,45,666
chr10	49171283	.	C	CAA	3112.78	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=14.284;DP=753;FS=0.863;HRun=5;HaplotypeScore=121.5946;InbreedingCoeff=0.9847;MQ=62.98;MQ0=6;MQRankSum=-12.488;QD=25.73;ReadPosRankSum=0.204;VQSLOD=1.9020;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,108,1372	0/0:13,0:13:39.10:0,39,481	0/0:39,0:24:32.77:0,33,417	0/0:36,0:26:34.80:0,35,430	0/0:33,0:33:96.29:0,96,1207	0/0:31,0:31:84.22:0,84,1026	0/0:25,0:25:72.22:0,72,901	0/0:35,0:35:84.21:0,84,1026	0/0:17,0:17:45.14:0,45,573	0/0:28,0:28:75.22:0,75,943	0/0:28,0:28:84.27:0,84,1062	0/0:22,0:22:66.21:0,66,841	0/0:24,0:24:66.17:0,66,808	0/0:22,0:22:60.17:0,60,748	0/0:32,0:32:93.27:0,93,1156	1/1:7,17:24:51.37:669,51,0	0/0:39,0:39:99:0,111,1415	0/0:29,0:29:69.63:0,70,895	1/1:16,2:14:26.72:260,27,0	1/1:9,23:32:72.91:1107,73,0	1/1:9,8:17:19.15:288,19,0	0/0:24,0:24:72.19:0,72,888	0/0:20,0:20:57.14:0,57,685	0/0:31,0:31:84.26:0,84,1070	0/0:18,0:18:45.12:0,45,543	0/0:41,0:41:99:0,106,1382	1/1:12,18:30:63.13:964,63,0	0/0:3,0:3:9.03:0,9,115
chr10	49171291	.	A	AGCAAAC	7657.13	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=14.183;DP=756;FS=0.000;HRun=0;HaplotypeScore=168.0137;InbreedingCoeff=0.9978;MQ=62.13;MQ0=7;MQRankSum=-13.208;QD=62.76;ReadPosRankSum=-1.116;VQSLOD=4.8936;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,131,2915	0/0:13,0:13:39.13:0,39,859	0/0:36,0:20:47.80:0,48,860	0/0:35,0:25:47.96:0,48,1041	0/0:35,0:35:99:0,102,2433	0/0:28,0:28:84.29:0,84,1976	0/0:24,0:24:72.23:0,72,1739	0/0:30,0:30:84.27:0,84,1895	0/0:18,0:18:54.17:0,54,1331	0/0:30,0:30:84.29:0,84,1955	0/0:28,0:28:84.29:0,84,2093	0/0:23,0:23:69.24:0,69,1687	0/0:24,0:24:72.20:0,72,1663	0/0:24,0:24:63.22:0,63,1560	0/0:30,0:30:90.29:0,90,2147	1/1:5,6:23:58.75:1421,59,0	0/0:48,0:48:99:0,141,3006	0/0:29,0:29:81.23:0,81,1909	1/1:15,1:14:35.54:935,36,0	1/1:5,18:32:76.35:2458,76,0	1/1:10,4:18:26.06:874,26,0	0/0:23,0:23:69.24:0,69,1684	0/0:17,0:17:51.18:0,51,1276	0/0:30,0:30:90.30:0,90,2192	0/0:14,0:14:39.13:0,39,911	0/0:43,0:42:80.56:0,81,2896	1/1:14,9:31:71.68:1968,72,0	0/0:6,0:6:18.06:0,18,395
chr10	49172592	.	G	GC	1317.48	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=12.713;DP=640;FS=6.601;HRun=0;HaplotypeScore=105.2674;InbreedingCoeff=0.9891;MQ=85.61;MQ0=0;MQRankSum=-11.853;QD=19.96;ReadPosRankSum=3.962;VQSLOD=5.7893;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,144,1978	0/0:9,0:9:27.09:0,27,375	0/0:23,0:23:65.24:0,65,847	0/0:21,0:21:56.19:0,56,726	0/0:23,0:23:69.21:0,69,941	0/0:24,0:24:72.24:0,72,1007	0/0:21,0:21:63.20:0,63,864	0/0:38,0:38:99:0,108,1495	0/0:34,0:34:99:0,102,1409	0/0:24,0:24:69.23:0,69,963	0/0:25,0:25:75.25:0,75,1047	0/0:29,0:29:87.29:0,87,1216	0/0:28,0:28:84.27:0,84,1159	0/0:25,0:25:72.23:0,72,989	0/0:28,0:28:84.27:0,84,1157	1/1:5,16:21:16.28:442,16,0	0/0:19,0:19:57.19:0,57,797	0/0:15,0:15:45.13:0,45,611	1/1:0,8:8:24.01:218,24,0	1/1:2,12:14:35.84:289,36,0	1/1:2,4:6:11.98:101,12,0	0/0:23,0:23:69.22:0,69,948	0/0:29,0:29:87.29:0,87,1213	0/0:34,0:34:99:0,102,1427	0/0:21,0:21:63.21:0,63,878	0/0:19,0:19:54.14:0,54,719	1/1:0,17:17:50.97:440,51,0	0/0:12,0:12:36.12:0,36,503
chr10	49172593	.	G	GGTAACTGTCAC	12618.03	PASS	AB=0.636;AC=9;AF=0.161;AN=56;BaseQRankSum=14.130;DP=661;FS=4.465;HRun=0;HaplotypeScore=219.5004;InbreedingCoeff=0.8632;MQ=83.11;MQ0=0;MQRankSum=-14.301;QD=137.15;ReadPosRankSum=1.305;VQSLOD=5.0283;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,144,5035	0/0:9,0:9:27.05:0,27,895	0/0:23,0:23:66.19:0,66,1921	0/0:18,0:18:54.16:0,54,1777	0/0:23,0:23:69.24:0,69,2309	0/0:25,0:25:72.25:0,72,2660	0/0:20,0:20:60.21:0,60,2173	0/0:37,0:37:99:0,105,3758	0/0:34,0:34:99:0,102,3620	0/0:24,0:24:72.24:0,72,2576	0/0:25,0:25:75.26:0,75,2704	0/0:30,0:30:87.30:0,87,3149	0/0:28,0:28:84.29:0,84,3045	0/0:25,0:25:72.22:0,72,2442	0/0:28,0:28:84.29:0,84,3006	0/1:12,16:28:27.58:3676,0,28	0/0:19,0:19:57.20:0,57,2075	0/0:15,0:15:45.15:0,45,1562	1/1:7,8:15:45.15:2156,45,0	1/1:9,11:21:54.19:2619,54,0	1/1:2,4:6:15.05:781,15,0	0/0:23,0:23:69.24:0,69,2490	0/0:29,0:29:87.30:0,87,3012	0/0:35,0:35:99:0,102,3739	0/0:21,0:21:63.22:0,63,2328	0/0:18,0:18:51.17:0,51,1781	1/1:5,16:22:66.23:3387,66,0	0/0:12,0:12:36.12:0,36,1303
chr10	49174330	.	G	GT	7832.35	PASS	AB=0.933;AC=41;AF=0.732;AN=56;BaseQRankSum=-8.729;DP=479;FS=4.190;HRun=9;HaplotypeScore=48.2496;InbreedingCoeff=0.9189;MQ=78.57;MQ0=0;MQRankSum=-2.380;QD=21.46;ReadPosRankSum=1.215;VQSLOD=5.6184;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:13,1:14:0.20:0,0,227	0/0:7,0:7:17.99:0,18,155	0/0:21,0:18:19.02:0,19,185	0/0:17,0:17:10.88:0,11,178	1/1:3,16:20:44.95:478,45,0	0/0:20,1:22:19.82:0,20,389	0/0:17,0:17:38.01:0,38,337	1/1:8,12:20:13.05:372,13,0	0/0:13,0:13:35.99:0,36,312	1/1:5,7:12:24.01:235,24,0	1/1:0,8:8:24.02:247,24,0	1/1:4,10:14:27.07:299,27,0	1/1:4,17:21:36.09:394,36,0	1/1:4,10:14:24.06:266,24,0	0/0:17,0:17:38.95:0,39,334	1/1:1,17:18:36.10:398,36,0	1/1:1,31:35:68.68:706,69,0	1/1:4,14:18:42.06:442,42,0	1/1:4,15:19:34.34:484,34,0	1/1:1,10:11:30.03:307,30,0	1/1:3,13:17:32.92:346,33,0	1/1:1,4:5:6.02:66,6,0	1/1:3,8:11:18.05:199,18,0	1/1:2,7:9:21.06:232,21,0	1/1:1,17:18:42.11:465,42,0	1/1:6,23:29:43.13:701,43,0	1/1:4,35:39:84.21:915,84,0	1/1:1,11:13:26.91:280,27,0
chr10	49174521	.	TTTTTA	T	1577.46	PASS	AC=10;AF=0.185;AN=54;BaseQRankSum=7.875;DP=364;FS=3.666;HRun=0;HaplotypeScore=64.1412;InbreedingCoeff=0.8107;MQ=67.23;MQ0=7;MQRankSum=0.459;QD=22.86;ReadPosRankSum=2.550;VQSLOD=3.2566;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:51.17:0,51,1375	0/0:4,0:4:9.03:0,9,255	0/0:19,0:9:5.97:0,6,85	0/0:33,0:12:15:0,15,293	0/0:15,0:15:33.09:0,33,830	0/0:15,0:15:24.04:0,24,613	0/0:5,0:5:15.05:0,15,384	0/0:24,0:22:39.13:0,39,1089	0/0:5,0:5:9.03:0,9,256	0/0:10,0:10:18.06:0,18,495	0/0:11,0:11:12.04:0,12,288	0/0:5,0:5:6.02:0,6,170	./.	0/0:5,0:5:15.04:0,15,366	0/0:10,0:10:12.04:0,12,341	1/1:2,7:9:18.06:335,18,0	0/0:17,0:17:36.10:0,36,908	0/0:28,0:28:57.17:0,57,1437	1/1:14,10:24:27.07:498,27,0	1/1:5,7:12:18.02:299,18,0	1/1:0,5:5:15.05:279,15,0	0/0:3,0:3:3.01:0,3,82	0/0:8,0:8:3.01:0,3,51	0/0:6,0:6:9.03:0,9,254	0/0:19,0:19:39.13:0,39,1107	0/0:17,0:17:27.09:0,27,757	1/1:9,10:19:18.06:334,18,0	0/0:9,0:9:21.03:0,21,531
chr10	49175994	.	CA	C	5269.03	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=17.092;DP=741;FS=1.602;HRun=2;HaplotypeScore=98.6911;InbreedingCoeff=0.9995;MQ=88.09;MQ0=0;MQRankSum=-5.517;QD=39.03;ReadPosRankSum=2.805;VQSLOD=5.0276;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,141,2178	0/0:11,0:11:33.09:0,33,498	0/0:29,0:29:84.27:0,84,1320	0/0:26,0:26:78.27:0,78,1238	0/0:35,0:35:99:0,99,1572	0/0:16,0:16:48.16:0,48,767	0/0:22,0:22:63.21:0,63,1007	0/0:37,0:37:99:0,105,1652	0/0:28,0:28:84.29:0,84,1334	0/0:34,0:34:99:0,102,1586	0/0:22,0:22:66.23:0,66,1054	0/0:25,0:25:75.26:0,75,1196	0/0:25,0:25:72.25:0,72,1146	0/0:27,0:27:81.28:0,81,1292	0/0:27,0:27:81.28:0,81,1295	1/1:0,24:24:66.22:923,66,0	0/0:23,0:23:69.24:0,69,1099	0/0:28,0:28:84.26:0,84,1312	1/1:0,18:18:51.16:696,51,0	1/1:0,35:35:90.30:1258,90,0	1/1:0,22:22:63.21:881,63,0	0/0:24,0:24:66.21:0,66,1032	0/0:33,0:33:90.29:0,90,1411	0/0:22,0:22:63.21:0,63,1007	0/0:15,0:15:45.15:0,45,719	0/0:41,0:41:99:0,123,1924	1/1:0,36:36:99:1510,108,0	0/0:8,0:8:24.08:0,24,384
chr10	49176242	.	A	AG	7280.03	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=1.526;DP=842;FS=1.833;HRun=0;HaplotypeScore=87.6344;InbreedingCoeff=1.0000;MQ=87.82;MQ0=0;MQRankSum=-7.056;QD=44.39;ReadPosRankSum=0.804;VQSLOD=5.0746;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:64,0:64:99:0,187,2520	0/0:18,0:18:54.17:0,54,740	0/0:37,0:37:70.85:0,71,1340	0/0:22,0:22:62.60:0,63,786	0/0:24,0:24:72.24:0,72,1005	0/0:20,0:20:60.20:0,60,839	0/0:38,0:38:99:0,114,1591	0/0:38,0:38:99:0,105,1423	0/0:22,0:22:66.22:0,66,922	0/0:32,0:32:90.28:0,90,1216	0/0:16,0:16:42.12:0,42,566	0/0:22,0:22:66.18:0,66,873	0/0:26,0:26:78.25:0,78,1072	0/0:28,0:28:84.24:0,84,1134	0/0:51,0:51:99:0,153,2085	1/1:0,38:38:99:1678,105,0	0/0:41,0:41:99:0,123,1681	0/0:14,0:14:42.11:0,42,567	1/1:1,26:27:78.27:1244,78,0	1/1:0,22:22:60.20:958,60,0	1/1:1,38:39:99:1726,108,0	0/0:30,0:30:87.29:0,87,1216	0/0:23,0:23:69.23:0,69,961	0/0:36,0:36:99:0,105,1451	0/0:29,0:28:87.27:0,87,1198	0/0:31,0:31:93.31:0,93,1295	1/1:0,38:38:99:1674,105,0	0/0:16,0:16:48.16:0,48,668
chr10	49178752	.	AAC	A	1761.80	PASS	AB=0.879;AC=31;AF=0.596;AN=52;BaseQRankSum=5.786;DP=512;FS=4.394;HRun=0;HaplotypeScore=66.4688;InbreedingCoeff=0.4173;MQ=56.14;MQ0=15;MQRankSum=1.144;QD=5.54;ReadPosRankSum=0.124;VQSLOD=2.4776;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:18,6:25:14.87:145,15,0	0/1:7,1:8:23.60:24,0,80	./.	./.	0/1:8,3:11:20.56:21,0,120	1/1:14,1:17:5.50:46,6,0	1/1:14,10:25:23.89:242,24,0	0/0:20,0:20:3.44:0,3,21	1/1:15,7:23:14.87:145,15,0	0/0:15,0:13:5.46:0,5,111	0/0:10,0:9:13.60:0,14,177	1/1:6,1:10:5.68:28,6,0	1/1:8,4:14:11.70:93,12,0	0/0:17,1:17:18.03:0,18,249	0/1:12,1:13:20.59:21,0,122	0/1:16,3:19:70.78:71,0,241	0/0:24,0:25:27.06:0,27,363	0/1:12,1:13:11.56:12,0,247	1/1:9,0:9:3.01:33,3,0	1/1:11,3:15:14.71:126,15,0	1/1:34,4:36:9.02:98,9,0	1/1:10,0:8:5.06:21,5,0	1/1:11,2:13:6.02:65,6,0	1/1:16,15:35:56.37:544,56,0	0/0:17,0:15:9.03:0,9,134	0/0:17,0:17:12.03:0,12,159	1/1:11,7:19:20.89:210,21,0	0/0:6,0:6:5.99:0,6,66
chr10	49179294	.	ATTG	A	3461.96	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=11.269;DP=843;FS=0.000;HRun=0;HaplotypeScore=119.4733;InbreedingCoeff=1.0000;MQ=77.60;MQ0=0;MQRankSum=-3.651;QD=37.23;ReadPosRankSum=0.464;VQSLOD=4.0368;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,126,2730	0/0:18,0:18:54.17:0,54,1150	0/0:16,0:16:41.35:0,41,797	0/0:21,0:21:51.17:0,51,1042	0/0:30,0:30:87.30:0,87,1877	1/1:3,28:31:72.12:1096,72,0	1/1:2,22:24:60.20:963,60,0	0/0:32,0:32:84.27:0,84,1777	1/1:3,35:38:89.52:1403,90,0	0/0:47,0:47:99:0,132,2866	0/0:18,0:18:39.13:0,39,860	0/0:24,0:24:69.24:0,69,1523	0/0:37,0:37:99:0,102,2125	0/0:47,0:47:99:0,129,2828	0/0:47,0:47:99:0,132,2789	0/0:40,0:40:99:0,111,2392	0/0:27,0:27:81.28:0,81,1757	0/0:23,0:23:60.19:0,60,1257	0/0:23,0:23:57.19:0,57,1219	0/0:23,0:24:65.69:0,66,1450	0/0:45,0:45:99:0,123,2612	0/0:33,0:33:96.33:0,96,2089	0/0:20,0:20:54.17:0,54,1130	0/0:24,0:24:60.21:0,60,1304	0/0:17,0:17:48.13:0,48,975	0/0:34,0:34:84.28:0,84,1816	0/0:33,0:33:93.30:0,93,2006	0/0:22,0:22:66.23:0,66,1453
chr10	49180174	.	CTG	C	221.87	PASS	AB=0.972;AC=17;AF=0.304;AN=56;BaseQRankSum=5.981;DP=660;FS=0.731;HRun=0;HaplotypeScore=137.3357;InbreedingCoeff=0.0944;MQ=52.89;MQ0=12;MQRankSum=-3.846;QD=0.79;ReadPosRankSum=-0.428;VQSLOD=2.5925;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:38,3:41:37.22:37,0,758	0/1:12,2:14:76.33:76,0,293	0/0:35,0:19:3.47:0,3,26	0/0:38,0:14:5.18:0,5,26	1/1:21,0:20:0.30:1,0,0	1/1:32,0:32:11.03:49,11,0	0/1:29,0:29:17.20:36,0,17	0/0:43,0:42:17.35:0,17,135	1/1:23,0:24:19.15:86,19,0	0/0:23,0:22:6:0,6,39	1/1:12,0:11:0.47:1,0,0	0/1:19,0:18:14.99:15,0,41	0/1:23,0:23:11.17:11,0,75	0/0:20,0:20:9.43:0,9,73	0/0:28,0:28:56.60:0,57,773	1/1:19,0:19:0.74:35,1,0	0/0:21,0:21:6.42:0,6,45	0/0:14,0:14:3.81:0,4,26	0/1:23,0:20:10.10:10,0,70	0/0:21,0:21:6.42:0,6,45	0/0:27,0:27:3.58:0,4,11	0/0:26,0:25:11:0,11,78	0/0:15,0:14:5.74:0,6,32	0/0:16,0:15:2.99:0,3,23	0/0:20,0:20:0.74:0,1,20	0/0:27,0:27:6.43:0,6,133	0/1:23,0:22:6.02:6,0,17	0/0:5,0:4:0:0,0,0
chr10	49180196	.	GTGTGTGTCTGTGTGTC	G	4505.59	PASS	AB=1.000;AC=31;AF=0.554;AN=56;BaseQRankSum=-2.972;DP=681;FS=8.675;HRun=0;HaplotypeScore=253.6015;InbreedingCoeff=0.0102;MQ=48.28;MQ0=24;MQRankSum=-1.578;QD=8.47;ReadPosRankSum=-0.867;VQSLOD=2.2992;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:41:96.29:0,96,4624	0/0:15,0:15:31.92:0,32,2144	0/1:18,0:3:2.94:9,0,3	0/0:34,0:4:3.56:0,4,13	0/1:29,0:26:94.71:95,0,544	1/1:31,1:32:14.26:384,14,0	1/1:29,1:30:44.96:645,45,0	0/1:40,0:37:99:137,0,660	1/1:27,0:26:21.04:596,21,0	0/1:31,0:30:99:140,0,872	0/1:15,0:14:5.56:6,0,426	0/1:23,0:22:99:132,0,544	0/1:26,0:26:99:127,0,117	0/1:25,0:25:6.98:7,0,371	0/0:28,0:26:48.57:0,49,2842	1/1:16,2:18:39.03:852,39,0	0/1:24,0:24:37.18:37,0,534	0/0:15,0:15:20.53:0,21,510	1/1:20,1:16:14.37:415,14,0	1/1:23,0:23:7.66:34,8,0	1/1:25,0:24:29.32:396,29,0	0/1:27,0:26:28.10:28,0,1013	0/1:22,0:21:93.75:94,0,219	0/0:15,0:14:3.01:0,3,88	0/1:20,0:20:99:100,0,285	0/1:27,0:27:99:169,0,1013	1/1:25,0:23:3.48:81,3,0	1/1:3,0:2:2.99:23,3,0
chr10	49180198	.	GTGTGTCTGTGTGTC	G	5678.15	PASS	AB=1.000;AC=31;AF=0.554;AN=56;BaseQRankSum=-4.620;DP=674;FS=5.938;HRun=0;HaplotypeScore=230.0538;InbreedingCoeff=-0.0373;MQ=48.08;MQ0=24;MQRankSum=-1.973;QD=10.84;ReadPosRankSum=-2.031;VQSLOD=3.1572;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:41:99:0,99,4169	0/0:15,0:15:31.98:0,32,1931	0/1:16,0:2:3.85:9,0,4	0/0:33,0:3:3.56:0,4,13	0/1:30,0:27:94.34:94,0,454	1/1:5,27:32:15.05:531,15,0	1/1:29,0:29:45.05:791,45,0	0/1:42,0:39:99:196,0,481	1/1:3,24:26:21.04:851,21,0	0/1:30,0:29:99:150,0,702	0/1:15,0:14:8.08:8,0,311	0/1:23,0:22:99:181,0,451	0/1:26,0:26:78.56:153,0,79	0/1:25,0:25:54.74:55,0,264	0/0:28,0:26:48.50:0,49,2567	1/1:16,2:18:39.07:866,39,0	0/1:24,0:24:43.22:43,0,438	0/0:15,0:15:2.96:0,3,364	1/1:20,1:16:9.10:492,9,0	1/1:4,18:22:8.99:123,9,0	1/1:25,0:24:31.72:548,32,0	0/1:27,0:26:43:43,0,802	0/1:22,0:21:94.76:95,0,148	0/0:16,0:15:3.48:0,3,67	0/1:20,0:20:99:102,0,187	0/1:25,0:25:99:197,0,858	1/1:3,20:21:3.90:127,4,0	1/1:2,0:1:2.99:23,3,0
chr10	49180202	.	GTC	G	2532.99	PASS	AB=0.968;AC=33;AF=0.589;AN=56;BaseQRankSum=1.333;DP=659;FS=0.000;HRun=0;HaplotypeScore=147.8528;InbreedingCoeff=-0.0673;MQ=47.81;MQ0=24;MQRankSum=-3.324;QD=4.82;ReadPosRankSum=-0.223;VQSLOD=2.9895;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:42:72.18:0,72,1269	0/0:15,0:15:2.57:0,3,407	1/1:16,0:2:3.31:15,3,0	0/0:33,0:3:6.66:0,7,32	0/1:28,2:27:58.37:58,0,153	1/1:29,0:29:14.62:85,15,0	1/1:25,1:26:44:361,44,0	0/1:40,0:37:99:180,0,281	1/1:27,0:26:20.28:119,20,0	0/1:28,0:27:99:164,0,183	0/1:13,2:14:28.95:29,0,90	0/1:23,1:23:99:164,0,99	1/1:27,1:28:18.36:138,18,0	0/1:22,2:24:49.46:49,0,66	0/0:27,0:25:51:0,51,875	1/1:19,0:19:44.22:320,44,0	0/1:22,1:23:17.02:17,0,67	0/1:16,0:16:36.96:84,0,37	0/1:17,0:12:4.68:125,0,5	1/1:21,0:21:8.77:52,9,0	1/1:23,1:23:32.54:249,33,0	0/1:26,1:26:74.15:74,0,144	0/1:20,0:19:47.15:67,0,47	0/0:15,1:15:8.90:0,9,63	0/1:19,1:20:75.25:75,0,78	0/1:26,0:26:99:240,0,225	1/1:21,0:19:3.40:19,3,0	1/1:4,0:3:2.47:22,2,0
chr10	49180210	.	GTC	G	2255.30	PASS	AB=0.982;AC=31;AF=0.554;AN=56;BaseQRankSum=2.149;DP=657;FS=0.411;HRun=0;HaplotypeScore=151.6348;InbreedingCoeff=-0.0386;MQ=49.34;MQ0=23;MQRankSum=-3.207;QD=4.32;ReadPosRankSum=-2.814;VQSLOD=2.3968;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:41:99:0,105,1669	0/0:15,0:15:37.35:0,37,539	1/1:19,0:3:4.83:19,5,0	0/0:32,0:3:8.59:0,9,63	0/1:29,2:28:38.06:38,0,249	1/1:28,0:28:14.62:85,15,0	1/1:28,0:27:41.55:305,42,0	0/1:45,0:42:99:163,0,353	1/1:27,0:26:20.28:119,20,0	0/1:28,0:27:99:148,0,253	0/1:16,0:15:26:26,0,113	0/1:26,0:25:93.97:138,0,94	1/1:24,0:24:1.87:92,2,0	0/1:20,2:22:27.98:28,0,71	0/0:26,0:24:65.78:0,66,1086	1/1:18,0:18:41.25:293,41,0	0/1:22,1:23:32.95:33,0,75	0/1:15,0:15:56.91:98,0,57	0/1:11,0:8:2.96:95,0,3	1/1:19,0:19:8.77:52,9,0	1/1:25,0:24:35.46:287,35,0	0/1:25,0:24:37.19:37,0,174	0/1:22,0:21:27.99:28,0,77	0/0:16,1:16:8.89:0,9,62	0/1:21,1:22:72.84:76,0,73	0/1:27,0:26:99:251,0,158	1/1:21,0:19:3.40:19,3,0	0/0:3,0:2:0.56:0,1,1
chr10	49180212	.	C	CTG	4032.25	PASS	AB=0.903;AC=28;AF=0.500;AN=56;BaseQRankSum=-0.859;DP=671;FS=33.370;HRun=0;HaplotypeScore=152.9849;InbreedingCoeff=0.4397;MQ=50.66;MQ0=22;MQRankSum=2.705;QD=9.38;ReadPosRankSum=-4.633;VQSLOD=0.9346;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:41:81.25:0,81,973	0/0:14,0:14:30.02:0,30,363	0/0:23,0:3:2.99:0,3,24	0/0:30,0:5:5.69:0,6,45	0/1:16,13:27:61.45:263,0,61	0/0:28,0:28:11.19:0,11,51	0/1:30,0:29:6.81:19,0,7	1/1:29,19:45:16.77:662,17,0	0/0:27,0:26:19.28:0,19,86	0/1:22,5:26:27.01:446,0,27	1/1:5,12:17:18.06:291,18,0	1/1:14,16:29:17.14:310,17,0	1/1:12,10:23:11.04:112,11,0	1/1:7,15:22:17.97:247,18,0	0/0:27,0:25:56.88:0,57,666	0/0:17,0:17:12.07:0,12,56	1/1:16,7:23:16.89:249,17,0	0/1:14,1:15:21.66:75,0,22	0/0:11,0:8:5.59:0,6,26	0/1:20,0:20:0:0,0,0	0/1:27,0:26:4.34:16,0,4	0/1:17,8:24:15.32:269,0,15	1/1:11,12:22:12.03:194,12,0	1/1:8,10:17:9.02:145,9,0	1/1:6,15:21:12.04:194,12,0	1/1:19,8:26:37.84:539,38,0	0/0:22,0:20:2.30:0,2,12	0/1:3,0:2:0.01:0,0,0
chr10	49180222	.	G	GTC	1499.12	PASS	AB=0.968;AC=18;AF=0.321;AN=56;BaseQRankSum=3.809;DP=646;FS=30.815;HRun=0;HaplotypeScore=152.7274;InbreedingCoeff=-0.1124;MQ=53.24;MQ0=16;MQRankSum=-0.878;QD=4.36;ReadPosRankSum=6.217;VQSLOD=0.8469;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:39:93.23:0,93,1328	0/0:12,0:12:36.10:0,36,507	0/0:20,0:3:5.92:0,6,40	0/0:19,0:8:12.53:0,13,119	0/1:28,0:25:99:107,0,144	0/0:28,0:28:17.93:0,18,153	0/0:27,0:26:49.66:0,50,389	0/1:48,0:45:99:222,0,362	0/0:28,0:27:27:0,27,240	0/1:26,0:25:99:145,0,245	0/1:19,0:18:24.91:119,0,25	0/1:25,1:25:58.01:127,0,58	1/1:17,2:19:1.79:83,2,0	0/1:22,0:24:67.81:105,0,68	0/0:28,0:26:65.91:0,66,937	0/0:19,0:19:35.81:0,36,307	0/1:24,1:25:70.59:104,0,71	0/1:15,0:16:29.91:30,0,149	0/0:9,0:7:20.97:0,21,180	0/0:21,0:21:11.84:0,12,83	0/0:28,0:27:42.22:0,42,339	0/1:21,1:21:79.57:119,0,80	0/1:24,1:24:69.74:70,0,74	1/1:16,2:17:8.97:74,9,0	0/1:20,1:21:26.97:78,0,27	0/1:23,1:23:72.99:274,0,73	0/0:23,0:21:15.44:0,15,124	1/1:3,0:2:1.36:3,1,0
chr10	49182796	.	GGCCCGCAAA	G	12961.97	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=17.398;DP=664;FS=3.589;HRun=0;HaplotypeScore=206.7658;InbreedingCoeff=0.9988;MQ=80.95;MQ0=0;MQRankSum=-17.488;QD=81.52;ReadPosRankSum=1.144;VQSLOD=4.5272;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,154,7510	0/0:10,0:10:30.10:0,30,1519	0/0:25,0:25:75.25:0,75,3086	0/0:18,0:18:54.17:0,54,1844	0/0:17,0:17:51.18:0,51,2522	1/1:0,23:23:63.22:1990,63,0	1/1:0,16:16:39.13:1231,39,0	0/0:23,0:23:69.24:0,69,3388	1/1:1,19:20:51.18:1608,51,0	0/0:25,0:25:75.25:0,75,3543	0/0:19,0:19:57.20:0,57,2804	0/0:25,0:25:75.26:0,75,3714	0/0:23,0:23:69.24:0,69,3385	0/0:25,0:25:72.25:0,72,3525	0/0:32,0:32:96.33:0,96,4774	1/1:0,24:24:72.25:2254,72,0	0/0:31,0:31:93.32:0,93,4581	0/0:16,0:16:48.16:0,48,2356	1/1:0,15:15:45.12:1349,45,0	1/1:1,22:23:48.16:1514,48,0	1/1:1,9:10:18.95:553,19,0	0/0:22,0:22:63.22:0,63,3079	0/0:23,0:23:66.23:0,66,3318	0/0:29,0:29:87.30:0,87,4367	0/0:37,0:37:99:0,111,5318	0/0:36,0:36:99:0,105,5067	1/1:1,27:28:78.27:2462,78,0	0/0:18,0:18:54.19:0,54,2612
chr10	49183017	.	G	GTATC	4335.42	PASS	AB=1.000;AC=18;AF=0.321;AN=56;BaseQRankSum=1.771;DP=620;FS=1.337;HRun=0;HaplotypeScore=154.7750;InbreedingCoeff=0.8306;MQ=74.30;MQ0=2;MQRankSum=-1.492;QD=19.62;ReadPosRankSum=0.980;VQSLOD=4.8663;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:18.99:0,19,953	0/1:13,0:13:12.50:13,0,279	0/0:26,0:24:47.85:0,48,663	0/0:13,0:10:15.04:0,15,225	0/0:24,0:24:48.16:0,48,721	1/1:21,0:19:14.29:171,14,0	1/1:12,0:12:15.02:223,15,0	0/0:32,0:32:75.25:0,75,1225	1/1:19,0:19:31.51:311,32,0	0/0:26,0:26:66.22:0,66,1010	0/0:20,0:20:38.92:0,39,560	0/0:12,0:12:30.09:0,30,436	0/0:22,0:22:51.10:0,51,744	0/0:18,0:18:39.13:0,39,581	0/1:25,0:25:72.70:73,0,428	1/1:19,4:23:24.08:405,24,0	0/0:18,0:18:45.12:0,45,650	0/0:18,0:18:36.10:0,36,500	1/1:24,0:23:56.95:891,57,0	1/1:31,0:30:48.15:787,48,0	1/1:17,0:17:36.12:594,36,0	0/0:30,0:30:81.25:0,81,1278	0/0:30,0:30:54.15:0,54,792	0/0:13,0:13:27.06:0,27,418	0/0:30,0:30:78.25:0,78,1169	0/0:26,0:26:75.25:0,75,1190	1/1:36,0:36:57.19:868,57,0	0/0:12,0:12:33.11:0,33,481
chr10	49183025	.	CTA	C	322.71	PASS	AB=0.961;AC=12;AF=0.214;AN=56;BaseQRankSum=8.563;DP=633;FS=0.500;HRun=0;HaplotypeScore=150.7423;InbreedingCoeff=0.4201;MQ=67.50;MQ0=3;MQRankSum=-1.037;QD=1.75;ReadPosRankSum=0.527;VQSLOD=2.4075;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:74.62:0,75,1213	0/0:16,0:16:27.07:0,27,364	0/0:19,0:17:48.11:0,48,645	0/0:11,0:8:15.05:0,15,223	0/0:24,0:24:29.37:0,29,447	1/1:22,0:19:0.11:33,0,0	1/1:9,3:12:5.79:42,6,0	0/0:39,0:39:99:0,112,1487	0/1:17,1:18:16.07:16,0,26	0/0:26,0:26:41.80:0,42,635	0/0:21,0:21:26.68:0,27,408	0/0:12,0:12:23.64:0,24,341	0/0:21,0:21:31.39:0,31,495	0/0:21,0:21:26.39:0,26,394	0/0:24,0:24:48.15:0,48,669	0/1:25,1:26:9.63:10,0,46	0/0:18,1:19:33.43:0,33,457	0/0:16,0:16:29.86:0,30,432	0/1:25,1:24:47.97:146,0,48	1/1:30,1:30:2.91:102,3,0	1/1:16,0:16:12.14:53,12,0	0/0:31,0:31:84.16:0,84,1374	0/0:31,0:31:47.39:0,47,695	0/0:14,0:14:14.27:0,14,321	0/0:29,0:29:53.36:0,53,796	0/0:28,0:28:56.54:0,57,827	0/1:32,1:33:50.43:71,0,50	0/0:17,0:17:14.21:0,14,226
chr10	49183027	.	ATATC	A	2740.90	PASS	AB=1.000;AC=28;AF=0.538;AN=52;BaseQRankSum=-2.002;DP=640;FS=6.105;HRun=0;HaplotypeScore=167.9130;InbreedingCoeff=0.7199;MQ=66.45;MQ0=5;MQRankSum=3.385;QD=8.62;ReadPosRankSum=-0.101;VQSLOD=2.6597;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:30:33.57:0,34,673	0/0:8,0:14:6.02:0,6,105	./.	./.	1/1:12,12:24:20.10:282,20,0	0/0:20,0:21:11.90:0,12,97	0/1:13,0:13:4.69:5,0,17	0/0:39,0:39:1.25:0,1,3	0/0:18,0:18:21.01:0,21,198	1/1:13,13:26:33.05:458,33,0	1/1:9,12:21:12.04:184,12,0	1/1:8,0:12:6.01:56,6,0	1/1:12,0:21:18.02:168,18,0	1/1:10,11:21:14.54:193,15,0	0/0:10,0:25:21.07:0,21,352	0/1:26,0:26:24.39:24,0,102	1/1:16,3:19:16.80:248,17,0	1/1:10,5:15:6.02:92,6,0	0/0:27,0:25:13.65:0,14,90	0/0:26,0:29:9.86:0,10,77	0/0:16,0:16:6.88:0,7,55	0/0:31,1:32:8.15:0,8,1071	1/1:20,0:30:7.69:68,8,0	1/1:13,0:15:8.53:61,9,0	1/1:19,10:29:24.08:368,24,0	1/1:18,11:29:33.08:451,33,0	0/0:32,0:36:36.44:0,36,293	1/1:6,11:17:18.06:276,18,0
chr10	49183059	.	CT	C	870.44	PASS	AB=0.798;AC=8;AF=0.154;AN=52;BaseQRankSum=9.523;DP=569;FS=3.615;HRun=1;HaplotypeScore=154.7354;InbreedingCoeff=-0.1733;MQ=52.96;MQ0=8;MQRankSum=-1.387;QD=4.71;ReadPosRankSum=1.041;VQSLOD=0.5404;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:72.21:0,72,1066	0/0:12,0:12:24.06:0,24,311	./.	./.	0/0:23,0:23:39.42:0,39,443	0/1:18,12:27:99:234,0,151	0/1:7,2:9:62.64:63,0,82	0/0:37,0:35:99:0,105,1514	0/1:13,7:20:70.20:70,0,431	0/0:20,0:20:47.35:0,47,494	0/0:17,0:17:24.23:0,24,240	0/0:9,0:9:15.05:0,15,221	0/0:19,0:19:27.55:0,28,385	0/0:18,0:18:27.28:0,27,310	0/0:26,0:26:51.13:0,51,657	0/1:19,7:26:99:100,0,217	0/0:23,0:23:50.91:0,51,647	0/0:15,0:14:27.19:0,27,360	0/1:21,4:19:99:143,0,283	0/1:19,6:24:63.17:63,0,271	0/1:12,1:13:2.01:2,0,322	0/0:26,0:26:73.80:0,74,1137	0/0:26,0:26:42.42:0,42,572	0/0:14,0:14:20.06:0,20,324	0/0:26,0:26:60.60:0,61,754	0/0:24,0:24:60.92:0,61,682	0/1:23,14:37:99:324,0,477	0/0:15,0:15:18.34:0,18,135
chr10	49183063	.	CT	C	1532.58	PASS	AB=0.903;AC=8;AF=0.148;AN=54;BaseQRankSum=9.272;DP=567;FS=5.348;HRun=1;HaplotypeScore=150.6359;InbreedingCoeff=-0.1834;MQ=52.50;MQ0=5;MQRankSum=-1.452;QD=8.11;ReadPosRankSum=1.680;VQSLOD=1.1683;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:29.37:0,29,959	0/0:10,0:10:18.05:0,18,240	0/0:3,0:1:2.98:0,3,21	./.	0/0:22,0:22:36.42:0,36,419	0/1:27,3:27:99:321,0,131	0/1:9,2:11:56.65:57,0,86	0/0:39,0:37:99:0,111,1599	0/1:19,0:19:99:123,0,411	0/0:21,0:21:50.36:0,50,538	0/0:17,0:17:21.27:0,21,238	0/0:10,0:10:18.06:0,18,265	0/0:19,0:19:27.52:0,28,361	0/0:18,0:18:27.28:0,27,310	0/0:26,0:26:51.13:0,51,655	0/1:24,1:25:65.58:162,0,66	0/0:22,0:22:47.92:0,48,621	0/0:15,0:14:24.18:0,24,315	0/1:14,9:19:99:387,0,202	0/1:26,5:30:99:137,0,250	0/1:13,0:13:17.33:17,0,256	0/0:25,0:25:70.79:0,71,1091	0/0:25,0:25:39.45:0,39,574	0/0:11,1:12:14.04:0,14,233	0/0:25,0:25:57.59:0,58,703	0/0:23,0:23:57.91:0,58,636	0/1:34,3:37:99:462,0,427	0/0:15,0:15:18.36:0,18,155
chr10	49183064	.	T	TATC	1915.77	PASS	AB=1.000;AC=11;AF=0.204;AN=54;BaseQRankSum=8.759;DP=567;FS=3.101;HRun=0;HaplotypeScore=167.0097;InbreedingCoeff=-0.0431;MQ=52.51;MQ0=5;MQRankSum=-0.677;QD=8.55;ReadPosRankSum=1.721;VQSLOD=3.0611;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:27.95:0,28,918	0/1:10,0:10:28.79:29,0,123	0/0:3,0:1:2.98:0,3,21	./.	0/0:22,0:22:45.12:0,45,590	0/1:30,0:27:99:341,0,101	0/1:11,0:11:83.60:84,0,84	0/0:37,0:35:99:0,105,1463	0/1:19,0:19:99:127,0,365	0/0:21,0:21:63.13:0,63,781	0/0:17,0:17:24.06:0,24,299	0/0:10,0:10:24.06:0,24,328	0/0:19,0:19:45.05:0,45,506	0/0:19,0:19:33.09:0,33,424	0/1:27,0:27:79.63:80,0,391	1/1:15,9:24:24.70:315,25,0	0/0:22,0:22:54.79:0,55,754	0/0:15,0:14:24.07:0,24,333	0/1:22,0:18:99:448,0,127	0/1:31,0:30:99:137,0,183	0/1:13,0:13:23.48:23,0,171	0/0:25,0:25:69.23:0,69,1099	0/0:27,0:27:33.55:0,34,570	0/0:13,0:13:19.84:0,20,268	0/0:25,0:25:60.16:0,60,780	0/0:23,0:23:63.16:0,63,790	0/1:37,0:37:99:484,0,329	0/0:15,0:15:27.06:0,27,310
chr10	49183075	.	CT	C	982.98	PASS	AB=0.711;AC=8;AF=0.143;AN=56;BaseQRankSum=8.167;DP=572;FS=1.716;HRun=1;HaplotypeScore=158.1407;InbreedingCoeff=-0.1419;MQ=53.86;MQ0=4;MQRankSum=-1.717;QD=5.07;ReadPosRankSum=1.176;VQSLOD=0.4658;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:63.20:0,63,930	0/0:9,0:9:15.04:0,15,187	0/0:8,0:5:15.04:0,15,189	0/0:4,0:4:12.04:0,12,169	0/0:24,0:24:39.52:0,40,499	0/1:15,17:29:80.22:227,0,80	0/1:9,4:13:8.91:61,0,9	0/0:29,0:27:72.72:0,73,990	0/1:8,8:16:97.09:97,0,206	0/0:21,0:21:39.53:0,40,442	0/0:18,0:18:21.60:0,22,260	0/0:11,0:11:23.56:0,24,303	0/0:20,0:20:40.89:0,41,485	0/0:21,0:22:27.61:0,28,421	0/0:28,0:28:57.15:0,57,716	0/1:17,7:24:49.74:102,0,50	0/0:20,0:20:11.79:0,12,419	0/0:13,0:12:19.42:0,19,256	0/1:18,9:23:99:257,0,177	0/1:19,14:32:60.34:60,0,143	0/1:7,5:12:14.72:15,0,103	0/0:23,0:23:64.10:0,64,986	0/0:26,0:26:44.45:0,44,566	0/0:13,0:13:19.08:0,19,250	0/0:22,0:22:43.19:0,43,502	0/0:21,0:21:39.41:0,39,421	0/1:19,18:37:99:299,0,269	0/0:18,0:17:23.38:0,23,258
chr10	49183076	.	TATC	T	1909.94	PASS	AB=0.979;AC=14;AF=0.250;AN=56;BaseQRankSum=13.445;DP=577;FS=1.249;HRun=0;HaplotypeScore=169.9137;InbreedingCoeff=0.3607;MQ=53.90;MQ0=4;MQRankSum=-1.257;QD=8.38;ReadPosRankSum=3.709;VQSLOD=3.1619;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:63.21:0,63,1112	0/0:9,0:9:15.05:0,15,215	0/0:9,0:6:18.05:0,18,231	0/0:4,0:4:12.04:0,12,168	0/0:24,0:24:20.93:0,21,471	0/1:32,0:29:82.87:266,0,83	1/1:10,2:12:12.02:124,12,0	0/0:29,0:27:77.85:0,78,946	0/1:16,0:16:99:128,0,223	0/0:21,0:21:10.90:0,11,375	0/0:19,0:19:11.01:0,11,276	0/0:11,0:11:15.51:0,16,284	0/0:20,0:20:16.51:0,17,434	0/0:22,0:22:19.52:0,20,403	0/0:29,0:29:57.14:0,57,796	0/1:22,2:24:46.74:174,0,47	0/1:19,1:20:20.35:20,0,419	0/0:13,0:12:13.01:0,13,243	0/1:27,0:23:67.15:400,0,67	1/1:34,0:33:16.29:229,16,0	1/1:12,0:12:11.53:123,12,0	0/0:23,0:23:57.69:0,58,1197	0/0:26,0:26:12.90:0,13,514	0/1:13,0:13:15.03:15,0,197	0/0:22,0:22:15.99:0,16,471	0/0:22,0:22:21.93:0,22,448	1/1:37,1:38:44.94:606,45,0	0/0:18,0:17:2.78:0,3,227
chr10	49183079	.	C	CT	2549.90	PASS	AB=0.765;AC=15;AF=0.268;AN=56;BaseQRankSum=10.334;DP=590;FS=4.685;HRun=1;HaplotypeScore=154.9328;InbreedingCoeff=0.5462;MQ=53.93;MQ0=4;MQRankSum=-1.238;QD=10.85;ReadPosRankSum=-0.677;VQSLOD=1.5591;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,1:29:66.18:0,66,904	0/0:9,0:9:7.37:0,7,122	0/0:9,0:6:18.05:0,18,231	0/0:5,0:5:15.05:0,15,199	0/0:25,0:25:51.53:0,52,650	0/1:13,18:30:41.31:326,0,41	1/1:9,5:14:15.03:167,15,0	0/0:32,0:30:84.26:0,84,1109	0/1:10,8:18:99:149,0,175	0/0:23,0:23:57.50:0,57,668	0/0:20,0:20:36.05:0,36,427	0/0:12,0:12:27.05:0,27,340	0/0:20,0:20:51.04:0,51,601	0/0:22,0:22:41.72:0,42,514	0/0:25,0:25:33.73:0,34,534	1/1:7,7:22:23.38:184,23,0	0/1:22,1:23:3.50:4,0,543	0/0:13,0:12:24.05:0,24,298	0/1:10,12:22:99:486,0,102	1/1:4,27:35:21.70:312,22,0	1/1:1,11:12:11:175,11,0	0/0:22,0:22:63.19:0,63,861	0/0:25,0:25:44.51:0,45,591	0/1:13,1:14:9.70:10,0,248	0/0:23,0:23:63.06:0,63,718	0/0:23,0:23:58.02:0,58,726	1/1:7,27:37:80.57:920,81,0	0/0:18,0:17:36.02:0,36,394
chr10	49183175	.	CATCT	C	161.71	PASS	AB=0.951;AC=7;AF=0.135;AN=52;BaseQRankSum=4.763;DP=668;FS=1.114;HRun=0;HaplotypeScore=118.5997;InbreedingCoeff=0.1348;MQ=69.88;MQ0=2;MQRankSum=-0.330;QD=1.18;ReadPosRankSum=0.136;VQSLOD=2.2467;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:19,9:27:12.04:184,12,0	0/1:10,1:11:25.08:25,0,289	./.	./.	0/0:40,0:40:66.18:0,66,1379	0/0:23,0:22:39.13:0,39,866	0/0:17,0:17:12.04:0,12,239	0/0:40,0:40:11.90:0,12,84	0/0:10,0:19:27.04:0,27,387	0/1:29,1:30:7.04:7,0,652	0/0:31,0:31:51.16:0,51,1124	0/0:24,0:24:48.16:0,48,1028	0/1:25,1:26:16.05:16,0,536	0/0:19,0:19:30.10:0,30,687	0/0:22,0:22:42.13:0,42,917	0/0:20,0:20:36.06:0,36,748	0/0:24,0:24:33.09:0,33,713	0/1:16,1:17:15.60:16,0,498	0/0:20,0:18:24.08:0,24,534	0/0:33,1:34:13.64:0,14,970	0/0:23,0:23:42.14:0,42,982	0/0:9,0:23:12.10:0,12,118	0/0:22,0:22:39.12:0,39,845	0/0:17,0:17:2.09:0,2,422	0/0:25,0:25:33.10:0,33,689	0/1:24,1:25:40.76:41,0,688	0/0:27,0:27:36.09:0,36,706	0/0:31,0:30:41.13:0,41,777
chr10	49185507	.	T	TG	16954.22	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-12.148;DP=674;FS=0.393;HRun=5;HaplotypeScore=68.2124;InbreedingCoeff=0.9991;MQ=85.02;MQ0=0;MQRankSum=-3.984;QD=30.55;ReadPosRankSum=2.100;VQSLOD=5.4903;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,99,1054	0/0:14,0:14:42.08:0,42,435	0/0:19,0:19:48.10:0,48,499	0/0:21,0:22:54:0,54,514	1/1:3,15:18:42.07:530,42,0	1/1:0,20:20:51.17:670,51,0	1/1:2,32:34:93.30:1219,93,0	1/1:1,19:20:57.15:707,57,0	1/1:1,20:21:51.17:671,51,0	1/1:5,26:31:78.22:984,78,0	1/1:1,9:10:24.08:316,24,0	1/1:5,23:28:54.17:709,54,0	1/1:0,23:23:54.03:708,54,0	1/1:3,31:34:78.24:1012,78,0	0/0:27,0:27:75.18:0,75,806	1/1:1,23:24:60.20:790,60,0	1/1:5,35:40:84.27:1105,84,0	1/1:5,19:24:48.16:631,48,0	1/1:1,17:18:48.14:603,48,0	1/1:2,13:15:33.01:391,33,0	1/1:3,42:45:99:1380,105,0	1/1:3,23:26:63.20:829,63,0	1/1:4,10:15:30.10:394,30,0	1/1:3,31:34:87.28:1145,87,0	1/1:3,19:22:54.18:710,54,0	1/1:4,16:20:48.10:582,48,0	1/1:5,13:18:39.13:513,39,0	1/1:3,12:15:27.09:355,27,0
chr10	49186032	.	GA	G	5336.31	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=11.622;DP=679;FS=1.537;HRun=3;HaplotypeScore=63.1808;InbreedingCoeff=0.9979;MQ=89.11;MQ0=0;MQRankSum=-1.601;QD=35.81;ReadPosRankSum=2.299;VQSLOD=5.5612;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,108,1531	0/0:7,0:7:18.06:0,18,259	0/0:29,0:29:81.27:0,81,1147	0/0:23,0:23:63.18:0,63,883	0/0:17,0:17:51.17:0,51,734	0/0:18,0:18:51.16:0,51,717	0/0:30,0:30:87.26:0,87,1214	0/0:39,0:39:99:0,108,1539	0/0:19,0:19:57.19:0,57,820	0/0:22,0:22:66.22:0,66,950	0/0:16,0:16:45.14:0,45,631	0/0:20,0:20:57.19:0,57,819	0/0:28,0:28:84.28:0,84,1208	0/0:26,0:26:72.22:0,72,1017	0/0:22,0:22:63.21:0,63,907	1/1:0,31:31:93.29:1153,93,0	0/0:36,0:36:96.25:0,96,1325	0/0:11,0:11:29.96:0,30,348	1/1:1,28:29:84.22:1024,84,0	1/1:0,22:22:63.20:781,63,0	1/1:0,31:31:87.27:1078,87,0	0/0:14,0:14:42.14:0,42,599	0/0:24,0:24:72.23:0,72,1018	0/0:28,0:28:78.24:0,78,1088	0/0:18,0:18:54.18:0,54,777	0/0:34,0:34:99:0,99,1386	1/1:0,36:36:99:1301,105,0	0/0:11,0:11:33.11:0,33,475
chr10	49186182	.	TTGTG	T	9679.45	PASS	AB=0.658;AC=34;AF=0.607;AN=56;BaseQRankSum=14.444;DP=649;FS=1.289;HRun=0;HaplotypeScore=145.7853;InbreedingCoeff=0.8234;MQ=56.01;MQ0=4;MQRankSum=-12.138;QD=25.21;ReadPosRankSum=1.019;VQSLOD=4.9416;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:56.45:0,56,1388	0/0:10,0:10:21.06:0,21,464	0/0:28,0:20:30.56:0,31,598	0/0:24,0:16:21.96:0,22,414	1/1:7,26:33:67.38:1018,67,0	1/1:5,10:17:20.50:458,21,0	0/1:5,7:12:42.51:320,0,43	1/1:38,14:52:44.64:695,45,0	1/1:12,11:23:30.10:491,30,0	1/1:10,12:22:36.12:590,36,0	1/1:4,12:16:33.11:538,33,0	1/1:9,7:16:21.07:344,21,0	1/1:5,12:17:39.13:637,39,0	1/1:9,10:20:30.10:470,30,0	0/0:21,0:22:47.89:0,48,1062	0/0:9,0:29:47.86:0,48,863	1/1:9,9:16:24.08:393,24,0	0/1:7,6:13:22.77:228,0,23	0/0:26,0:26:48.11:0,48,1013	0/0:25,0:26:53.91:0,54,1208	0/0:33,0:33:59.82:0,60,1179	1/1:8,7:16:25.32:375,25,0	1/1:12,9:21:27.09:442,27,0	1/1:11,2:13:3.01:49,3,0	1/1:6,28:33:81.54:1284,82,0	1/1:6,17:23:51.14:807,51,0	0/0:36,0:35:65.91:0,66,1443	1/1:4,14:18:33.11:541,33,0
chr10	49188830	.	GTATC	G	504.68	PASS	AB=1.000;AC=23;AF=0.500;AN=46;BaseQRankSum=-1.399;DP=811;FS=3.060;HRun=0;HaplotypeScore=244.2206;InbreedingCoeff=0.1906;MQ=32.00;MQ0=31;MQRankSum=2.064;QD=0.83;ReadPosRankSum=-4.649;VQSLOD=1.7564;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:17:11.70:76,12,0	1/1:15,3:17:20.92:182,21,0	./.	./.	1/1:48,0:46:2.99:23,3,0	0/1:26,0:23:4.43:15,0,4	./.	0/0:29,0:21:5.57:0,6,30	1/1:30,0:29:8.49:49,8,0	0/1:53,0:41:99:106,0,282	./.	1/1:33,0:28:3.23:10,3,0	0/0:34,0:32:2.82:0,3,18	0/1:30,0:23:0:0,0,0	1/1:20,5:24:5.96:45,6,0	0/1:46,0:35:18.11:19,0,18	0/0:12,0:10:8.91:0,9,92	0/0:15,0:11:6.79:0,7,70	0/0:8,0:6:2.88:0,3,15	0/1:40,0:29:0:0,0,0	0/0:10,0:8:0.47:0,0,1	0/1:55,0:52:0.49:1,0,0	0/1:52,0:50:0.16:0,0,0	./.	1/1:45,0:35:1.86:5,2,0	0/1:42,0:27:90.51:91,0,94	0/0:38,0:28:0.98:0,1,23	0/1:42,0:38:10.19:10,0,117
chr10	49188848	.	A	ATCC	441.31	PASS	AB=0.987;AC=11;AF=0.220;AN=50;BaseQRankSum=0.987;DP=870;FS=32.202;HRun=0;HaplotypeScore=264.5683;InbreedingCoeff=-0.0000;MQ=28.04;MQ0=39;MQRankSum=-0.876;QD=1.15;ReadPosRankSum=-2.585;VQSLOD=1.2521;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:23:20.16:0,20,296	0/0:17,0:15:39.12:0,39,603	./.	./.	0/0:56,0:50:2.54:0,3,48	0/1:27,2:25:97.47:113,0,97	0/0:10,0:8:0.43:0,0,1	0/1:28,0:18:81.06:81,0,303	0/1:27,1:28:52.76:277,0,53	0/0:64,0:43:66.99:0,67,1660	0/1:43,1:35:0:0,0,0	0/1:41,0:34:7.20:7,0,41	0/1:42,0:39:31.78:32,0,72	0/0:29,0:22:5.21:0,5,94	0/0:24,0:23:24.02:0,24,400	0/0:45,0:34:4.73:0,5,176	0/0:14,0:10:11.87:0,12,201	0/1:15,0:11:1.69:2,0,261	0/0:6,0:4:5.83:0,6,118	1/1:43,0:33:1.27:40,1,0	0/0:7,0:6:3.67:0,4,19	0/1:64,0:55:1.36:1,0,46	0/1:50,0:40:0.17:2,0,0	./.	0/0:47,0:36:4.30:0,4,69	0/0:55,0:32:67.94:0,68,1085	0/0:38,0:28:4.83:0,5,114	0/0:31,0:27:47.99:0,48,759
chr10	49188872	.	ATCC	A	316.84	PASS	AB=0.840;AC=13;AF=0.250;AN=52;BaseQRankSum=6.250;DP=889;FS=4.534;HRun=0;HaplotypeScore=288.3885;InbreedingCoeff=-0.1781;MQ=27.18;MQ0=39;MQRankSum=-0.974;QD=0.82;ReadPosRankSum=-1.184;VQSLOD=1.7269;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:32,0:26:14.52:15,0,360	0/0:12,0:10:23.91:0,24,319	./.	./.	0/0:58,1:51:3:0,3,27	0/1:17,6:18:10.10:10,0,68	0/0:14,1:14:5.99:0,6,53	0/0:52,0:42:99:0,107,1576	0/1:10,10:19:16.65:66,0,17	0/1:62,7:48:41.78:42,0,1631	0/0:50,2:45:4.03:0,4,25	0/0:35,4:30:4.78:0,5,32	0/1:39,5:39:32.61:33,0,141	0/0:20,4:19:2.76:0,3,22	0/0:25,0:24:8.62:0,9,97	0/1:13,15:21:12.89:54,0,13	0/0:12,1:10:10.81:0,11,80	0/1:10,1:8:17.63:18,0,57	0/1:8,2:9:56.38:56,0,107	0/0:29,10:31:1.25:0,1,12	1/1:7,2:6:4.21:23,4,0	0/1:71,1:62:0.23:0,0,1	0/0:51,0:39:8.29:0,8,51	0/0:15,1:13:0:0,0,0	0/0:39,4:38:10.20:0,10,118	0/0:60,2:38:26.22:0,26,1136	0/1:25,14:28:55.34:55,0,60	0/1:24,2:27:79.44:79,0,444
chr10	49188874	.	CCTCT	C	641.35	PASS	AB=0.959;AC=17;AF=0.327;AN=52;BaseQRankSum=1.774;DP=878;FS=74.991;HRun=0;HaplotypeScore=294.1793;InbreedingCoeff=0.0732;MQ=27.52;MQ0=40;MQRankSum=-3.495;QD=1.66;ReadPosRankSum=0.305;VQSLOD=-0.5685;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:27:15.97:0,16,644	0/0:13,0:11:26.94:0,27,505	./.	./.	0/0:57,0:50:3:0,3,25	0/1:18,3:16:13.88:14,0,39	0/0:15,0:14:5.97:0,6,57	0/1:53,0:44:99:136,0,440	0/1:17,2:18:8.19:70,0,8	0/0:70,0:49:99:0,102,1052	0/0:52,0:45:4.59:0,5,22	0/0:38,0:30:9.39:0,9,39	0/1:44,1:39:11.49:20,0,11	0/0:25,0:20:3.84:0,4,53	0/1:26,0:25:8.55:9,0,157	0/1:26,0:19:0.27:115,0,0	0/1:13,0:10:29.49:29,0,44	0/1:11,0:8:25.17:27,0,25	0/1:9,2:9:22.69:156,0,23	1/1:29,4:30:3.11:27,3,0	1/1:9,0:6:2.84:23,3,0	0/1:69,0:59:0.25:0,0,1	0/0:51,0:39:8.18:0,8,44	0/1:14,0:13:0:0,0,0	0/0:42,0:38:9.70:0,10,72	0/0:62,0:39:30.61:0,31,738	1/1:31,2:26:19.02:160,19,0	0/0:26,0:27:51.89:0,52,367
chr10	49188875	.	CTCTA	C	470.66	PASS	AB=0.912;AC=16;AF=0.333;AN=48;BaseQRankSum=0.320;DP=886;FS=0.000;HRun=0;HaplotypeScore=299.3758;InbreedingCoeff=0.1968;MQ=27.53;MQ0=39;MQRankSum=-1.545;QD=1.18;ReadPosRankSum=-1.992;VQSLOD=1.7400;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:27:24.42:0,24,478	0/0:13,0:11:18.06:0,18,376	./.	./.	./.	0/1:21,0:16:14.20:14,0,53	0/0:15,0:14:2.97:0,3,20	0/0:54,0:45:8.88:0,9,62	1/1:20,0:19:10.61:56,11,0	0/0:70,0:49:46.77:0,47,337	0/1:52,0:45:0.05:0,0,0	0/0:39,0:30:1.16:0,1,5	0/0:45,0:39:2.04:0,2,11	0/0:24,0:20:2.20:0,2,37	0/1:11,15:25:54.45:54,0,126	0/1:26,0:19:15.92:33,0,16	0/0:13,0:10:1.34:0,1,4	0/0:11,0:9:0.38:0,0,22	0/1:9,2:9:50.41:123,0,50	0/1:28,8:32:12.45:41,0,12	1/1:9,0:6:2.84:23,3,0	0/1:69,0:59:0.56:1,0,1	0/1:51,0:39:0.01:0,0,0	./.	1/1:44,0:38:2.98:8,3,0	0/0:62,0:39:39.31:0,39,315	1/1:26,9:29:18.36:250,18,0	0/0:29,0:27:13.39:0,13,108
chr10	49188885	.	C	CTAT	422.68	PASS	AB=0.887;AC=9;AF=0.173;AN=52;BaseQRankSum=3.451;DP=899;FS=6.634;HRun=0;HaplotypeScore=306.0853;InbreedingCoeff=-0.0962;MQ=27.43;MQ0=42;MQRankSum=-0.983;QD=1.54;ReadPosRankSum=-2.151;VQSLOD=1.0036;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:26:32.16:0,32,483	0/0:13,0:11:27.09:0,27,437	./.	./.	0/0:61,0:53:3.01:0,3,46	0/1:14,6:21:49.81:50,0,136	0/0:10,6:15:5.70:0,6,91	0/0:55,0:45:99:0,123,1800	0/1:10,3:18:35.12:69,0,35	0/0:63,0:46:99:0,117,1563	0/0:52,0:45:4.81:0,5,32	0/1:40,0:32:8.43:8,0,61	0/0:45,0:39:14.40:0,14,192	0/0:26,0:21:7.84:0,8,100	0/0:23,0:23:15.04:0,15,220	0/1:31,0:24:58.11:117,0,58	0/0:16,0:13:8.25:0,8,72	0/0:13,0:9:11.57:0,12,147	0/1:8,2:8:78.59:208,0,79	0/1:28,11:36:23.81:62,0,24	0/0:9,1:6:3.13:0,3,19	1/1:66,0:56:0.26:3,0,0	0/0:49,0:37:5.93:0,6,50	0/0:18,0:15:0:0,0,1	0/0:44,0:40:7.87:0,8,120	0/0:62,0:38:95.18:0,95,1307	0/1:34,4:33:28.12:28,0,162	0/0:25,0:23:43.81:0,44,552
chr10	49188898	.	T	TATC	1108.75	PASS	AB=0.970;AC=20;AF=0.385;AN=52;BaseQRankSum=2.176;DP=834;FS=8.581;HRun=0;HaplotypeScore=293.6606;InbreedingCoeff=-0.1130;MQ=28.49;MQ0=36;MQRankSum=-4.399;QD=1.86;ReadPosRankSum=-4.779;VQSLOD=0.3465;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:24:27.20:0,27,495	0/0:11,0:9:27.09:0,27,437	./.	./.	0/0:45,5:41:2.97:0,3,45	0/1:26,0:21:49.35:78,0,49	0/1:18,0:18:12.72:13,0,40	0/1:42,0:35:99:185,0,665	1/1:22,0:21:19.49:139,19,0	0/1:59,1:45:99:184,0,615	0/1:43,4:41:0.22:0,0,0	0/1:38,0:30:24.87:39,0,25	0/1:40,0:34:27.38:27,0,87	0/1:25,1:21:23.68:81,0,24	0/0:30,0:29:45.13:0,45,657	0/0:28,0:24:17.68:0,18,169	0/0:10,0:8:14.70:0,15,153	0/0:13,0:10:8.02:0,8,191	0/1:10,0:9:12.90:13,0,181	0/1:40,0:36:22.20:23,0,22	0/0:10,0:6:4.13:0,4,14	1/1:58,0:49:1.20:4,1,0	1/1:41,0:31:1.41:4,1,0	0/0:18,0:15:0:0,0,0	1/1:36,2:34:2.80:10,3,0	0/1:55,5:39:99:336,0,655	0/0:36,0:29:2.74:0,3,188	0/1:24,5:27:99:115,0,124
chr10	49188899	.	A	ATCC	1012.57	PASS	AB=0.988;AC=19;AF=0.365;AN=52;BaseQRankSum=3.017;DP=813;FS=0.000;HRun=0;HaplotypeScore=287.8348;InbreedingCoeff=0.1111;MQ=28.60;MQ0=38;MQRankSum=-2.726;QD=1.93;ReadPosRankSum=-3.772;VQSLOD=1.3323;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:24:32.49:0,32,541	0/0:11,0:9:27.09:0,27,460	./.	./.	0/0:49,0:40:2.97:0,3,40	0/1:22,3:20:71.73:132,0,72	0/0:19,0:18:2.61:0,3,50	0/1:42,0:34:99:138,0,867	1/1:22,0:21:17.86:240,18,0	0/1:58,0:43:99:106,0,809	1/1:42,0:36:3.35:16,3,0	0/1:35,0:27:23.01:23,0,37	0/1:37,0:31:47.51:48,0,77	0/1:27,0:22:43.33:44,0,43	0/0:30,0:29:45.15:0,45,738	0/0:28,0:24:17.71:0,18,209	0/0:10,0:8:17.77:0,18,213	0/0:13,0:10:17.55:0,18,247	0/0:10,0:9:22.31:0,22,284	0/0:40,0:36:6.37:0,6,41	0/0:10,0:6:4.63:0,5,30	1/1:56,0:47:1.26:6,1,0	1/1:38,0:29:4.20:24,4,0	0/1:18,0:15:0.22:0,0,0	1/1:37,1:34:7.84:42,8,0	0/1:58,0:36:99:247,0,655	0/0:35,0:28:22.16:0,22,239	0/1:29,0:27:99:103,0,155
chr10	49188902	.	T	TATC	743.30	PASS	AB=0.974;AC=17;AF=0.327;AN=52;BaseQRankSum=2.592;DP=812;FS=6.223;HRun=0;HaplotypeScore=289.2380;InbreedingCoeff=-0.1681;MQ=28.77;MQ0=41;MQRankSum=-3.113;QD=1.35;ReadPosRankSum=-3.666;VQSLOD=1.2695;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:24:27.41:0,27,500	0/0:11,0:9:27.09:0,27,437	./.	./.	0/1:43,3:37:0:0,0,0	0/1:24,0:19:73.74:83,0,74	0/1:19,0:18:14.76:15,0,40	0/1:36,0:28:54.31:54,0,495	0/1:23,0:22:94.24:117,0,94	0/1:56,1:42:99:285,0,610	0/0:44,0:38:3.50:0,4,29	0/1:34,2:28:29.21:52,0,29	0/1:34,3:31:4.21:4,0,91	0/0:26,1:22:7.70:0,8,122	0/0:31,0:30:45.15:0,45,678	0/0:26,0:23:14.70:0,15,154	0/0:10,0:8:14.61:0,15,140	0/0:13,0:10:17.23:0,17,195	0/1:12,0:10:18.93:19,0,159	0/1:43,0:39:19.63:20,0,105	0/0:11,0:6:3.87:0,4,13	1/1:52,4:47:1.70:5,2,0	0/1:33,3:27:0.21:0,0,0	0/0:16,2:15:0:0,0,0	1/1:38,0:34:0.71:5,1,0	0/1:57,1:37:99:154,0,670	0/0:32,0:26:3.24:0,3,189	0/1:28,1:27:61.74:62,0,215
chr10	49188922	.	TACCTATC	T	6540.70	PASS	AB=0.923;AC=32;AF=0.593;AN=54;BaseQRankSum=-2.807;DP=689;FS=9.334;HRun=0;HaplotypeScore=230.4918;InbreedingCoeff=-0.0145;MQ=32.27;MQ0=37;MQRankSum=0.969;QD=11.30;ReadPosRankSum=-0.917;VQSLOD=2.0074;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:24:7:0,7,1107	0/0:10,0:10:30.05:0,30,622	0/0:15,0:2:6.02:0,6,126	./.	1/1:35,0:27:5.93:134,6,0	0/1:18,3:17:71.87:232,0,72	0/1:18,0:15:53.68:54,0,111	0/0:19,0:13:5.27:0,5,72	0/1:18,2:18:99:369,0,179	0/1:34,16:36:13.66:909,0,14	1/1:29,0:23:8.87:211,9,0	0/1:36,0:29:20.82:253,0,21	1/1:32,0:28:12.74:207,13,0	1/1:23,1:22:14.51:278,15,0	0/0:33,0:33:54.19:0,54,1236	1/1:22,0:21:22.65:366,23,0	1/1:11,0:9:12.56:269,13,0	0/1:11,0:11:1.58:258,0,2	0/1:13,2:10:99:298,0,116	0/1:37,4:38:81.60:478,0,82	1/1:9,0:7:6.90:142,7,0	1/1:37,0:28:2.59:70,3,0	0/1:28,0:20:5.03:199,0,5	1/1:14,0:13:2.66:70,3,0	0/1:17,3:19:26.42:132,0,26	0/1:42,0:29:99:647,0,153	0/1:32,2:29:99:430,0,166	1/1:27,0:26:32.43:535,32,0
chr10	49188926	.	TATC	T	4552.39	PASS	AB=0.982;AC=32;AF=0.593;AN=54;BaseQRankSum=1.950;DP=638;FS=11.035;HRun=0;HaplotypeScore=188.5017;InbreedingCoeff=0.0384;MQ=34.31;MQ0=35;MQRankSum=-0.051;QD=8.57;ReadPosRankSum=-1.246;VQSLOD=3.6190;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:23:13.23:0,13,787	0/0:7,0:7:21.07:0,21,422	0/0:17,0:3:6.02:0,6,135	./.	1/1:31,0:23:5.99:92,6,0	0/1:23,0:19:99:173,0,114	0/1:16,0:13:36.65:37,0,117	0/0:17,0:11:9.74:0,10,272	0/1:20,0:18:99:236,0,200	0/1:43,0:29:32.83:605,0,33	1/1:22,1:17:8.90:137,9,0	1/1:34,0:28:14.90:194,15,0	1/1:24,4:24:5.32:115,5,0	1/1:22,1:21:15.86:194,16,0	0/0:34,0:34:60.20:0,60,1274	1/1:17,2:18:15.91:211,16,0	1/1:10,0:8:15.05:218,15,0	0/1:11,1:11:3.85:183,0,4	0/1:14,0:9:99:126,0,164	0/1:37,0:34:91.21:339,0,91	0/1:11,0:9:1.13:124,0,1	1/1:29,5:25:8.97:118,9,0	0/1:20,3:15:4.27:126,0,4	1/1:15,0:13:2.55:45,3,0	0/1:19,0:18:38.44:104,0,38	0/1:38,1:28:89.27:562,0,89	0/1:35,0:30:99:324,0,128	1/1:22,0:21:15.61:290,16,0
chr10	49188928	.	T	TG	218.06	PASS	AB=0.954;AC=15;AF=0.278;AN=54;BaseQRankSum=3.691;DP=642;FS=15.317;HRun=0;HaplotypeScore=202.3129;InbreedingCoeff=0.0170;MQ=35.10;MQ0=33;MQRankSum=-5.573;QD=0.61;ReadPosRankSum=2.257;VQSLOD=1.6718;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,1:27:40.47:0,40,515	0/0:7,0:7:21.07:0,21,294	0/0:16,0:3:6.02:0,6,84	./.	0/1:27,3:23:1.02:4,0,1	0/0:25,0:21:17.83:0,18,168	0/0:15,0:12:4.56:0,5,81	0/0:18,0:12:20.96:0,21,247	0/1:22,0:20:0.28:0,0,165	0/1:42,0:29:7.49:7,0,146	0/0:21,1:17:5.45:0,5,15	0/1:30,4:28:0.38:0,0,9	0/1:27,1:24:1.25:1,0,17	0/1:21,2:21:7.33:44,0,7	0/0:35,0:35:63.17:0,63,847	0/1:21,0:20:5.36:5,0,43	1/1:8,2:8:6.65:65,7,0	0/0:10,1:10:1.40:0,1,43	0/0:14,0:9:12.64:0,13,175	0/0:37,0:34:1.20:0,1,123	0/0:10,0:8:8.30:0,8,57	1/1:34,0:25:0.58:8,1,0	0/0:23,0:16:8.37:0,8,31	0/0:15,0:13:1.55:0,2,4	0/1:18,1:18:2.39:2,0,44	0/1:33,4:28:99:185,0,138	0/1:35,0:30:13.96:14,0,192	0/1:21,1:21:2.76:3,0,68
chr10	49188929	.	C	CT	5265.33	PASS	AB=0.720;AC=32;AF=0.593;AN=54;BaseQRankSum=0.152;DP=622;FS=8.221;HRun=1;HaplotypeScore=170.5801;InbreedingCoeff=-0.1070;MQ=35.81;MQ0=32;MQRankSum=0.702;QD=10.05;ReadPosRankSum=0.294;VQSLOD=2.1750;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:27:25.53:0,26,516	0/0:7,0:7:21.07:0,21,292	0/0:18,0:4:6.02:0,6,84	./.	1/1:10,18:21:5.64:87,6,0	0/1:12,9:17:85.78:207,0,86	0/1:6,7:10:30.60:31,0,74	0/1:17,0:11:30.69:31,0,183	0/1:11,10:19:99:276,0,138	0/1:29,10:27:14.20:658,0,14	1/1:11,12:18:8.83:132,9,0	1/1:18,16:28:13.79:189,14,0	1/1:20,10:26:12.97:161,13,0	1/1:8,13:19:13.35:222,13,0	0/0:37,0:37:63.20:0,63,877	0/1:5,15:19:4.02:204,0,4	1/1:3,7:8:15.04:226,15,0	0/1:7,3:9:15.11:179,0,15	0/1:12,2:9:99:112,0,127	0/1:24,12:34:72.29:347,0,72	0/1:5,5:8:7.36:169,0,7	1/1:18,13:22:8.98:134,9,0	0/1:10,12:16:5.44:120,0,5	1/1:12,2:12:2.71:45,3,0	0/1:8,10:17:26.86:124,0,27	0/1:15,21:27:45.48:884,0,45	0/1:19,14:28:99:368,0,157	1/1:8,15:22:24.61:361,25,0
chr10	49189030	.	CATCTATCTATCT	C	5029.61	PASS	AB=0.632;AC=23;AF=0.426;AN=54;BaseQRankSum=2.348;DP=660;FS=65.097;HRun=0;HaplotypeScore=205.9068;InbreedingCoeff=0.7833;MQ=53.49;MQ0=4;MQRankSum=-4.549;QD=19.34;ReadPosRankSum=0.444;VQSLOD=2.0011;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:32:26.72:0,27,1110	0/0:11,0:11:24.08:0,24,1196	0/0:16,0:10:3.01:0,3,45	0/0:7,0:6:0.47:0,0,1	1/1:15,7:22:23.94:518,24,0	1/1:9,11:19:8.99:227,9,0	1/1:4,0:4:3.01:67,3,0	1/1:25,0:25:6.02:84,6,0	1/1:9,20:29:24:662,24,0	1/1:20,5:24:33.08:838,33,0	1/1:12,11:23:10.99:267,11,0	0/0:14,0:19:18.06:0,18,432	0/0:17,0:24:24.08:0,24,577	1/1:10,15:25:20.99:473,21,0	0/0:39,0:38:72.23:0,72,3220	0/0:16,0:25:29.58:0,30,369	1/1:8,9:16:0.45:199,0,0	0/1:10,14:24:10.31:98,0,10	0/0:18,0:18:24.08:0,24,1163	0/0:37,0:37:63.22:0,63,2864	0/0:20,0:19:36.12:0,36,1810	0/0:19,0:25:30.09:0,30,686	0/0:19,0:30:49.09:0,49,1103	0/0:16,0:32:36.12:0,36,851	1/1:17,2:18:15:316,15,0	1/1:20,6:25:45.15:1281,45,0	0/0:45,0:41:72.25:0,72,3529	./.
chr10	49189080	.	CATCTATGTATCA	C	666.72	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=3.010;DP=590;FS=6.738;HRun=0;HaplotypeScore=214.2266;InbreedingCoeff=0.6632;MQ=49.61;MQ0=10;MQRankSum=-4.743;QD=23.81;ReadPosRankSum=1.179;VQSLOD=2.2023;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:23:44.68:0,45,1985	0/0:8,0:8:21.07:0,21,978	0/0:25,0:17:51.17:0,51,2189	0/0:16,0:11:30.10:0,30,1298	0/0:21,0:21:45.03:0,45,1693	0/0:20,0:19:26.93:0,27,1121	0/0:11,0:11:30.10:0,30,1337	0/0:34,0:30:87.30:0,87,3665	0/0:26,0:26:48.13:0,48,1841	0/0:18,0:12:33.11:0,33,1265	0/0:18,0:17:21.03:0,21,632	0/0:22,0:20:48.16:0,48,2373	0/0:23,0:20:48.16:0,48,2352	0/0:19,0:19:24.08:0,24,852	0/0:30,0:30:81.26:0,81,3667	1/1:9,6:15:30.10:759,30,0	0/1:12,0:12:9.77:10,0,610	0/0:20,0:22:29.93:0,30,1214	0/0:16,0:16:39.13:0,39,1551	0/0:24,0:24:66.23:0,66,2702	0/0:29,0:28:87.30:0,87,4200	0/0:21,0:19:48.16:0,48,1833	0/0:24,0:22:48.16:0,48,1877	0/0:26,0:26:45.07:0,45,1687	0/0:12,0:11:24.08:0,24,1002	0/0:26,0:23:66.23:0,66,2859	0/0:32,0:31:72.20:0,72,2531	0/0:11,0:9:27.09:0,27,1625
chr10	49189085	.	ATGTAT	A	172.67	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.289;DP=613;FS=12.477;HRun=0;HaplotypeScore=161.3760;InbreedingCoeff=0.9839;MQ=50.31;MQ0=8;MQRankSum=-4.865;QD=15.70;ReadPosRankSum=0.085;VQSLOD=2.4542;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:23:42.14:0,42,1399	0/0:8,0:8:24.08:0,24,799	0/0:29,0:18:54.19:0,54,1705	0/0:17,0:12:33.11:0,33,1073	0/0:23,0:23:48.05:0,48,1444	0/0:20,0:20:30.55:0,31,869	0/0:14,0:14:39.13:0,39,1221	0/0:34,0:32:96.33:0,96,3190	0/0:25,0:25:51.04:0,51,1550	0/0:19,0:12:29.47:0,29,1074	0/0:18,0:17:21.06:0,21,575	0/0:24,0:22:57.20:0,57,1841	0/0:23,0:20:48.16:0,48,1568	0/0:22,0:22:33.11:0,33,946	0/0:33,0:33:90.30:0,90,2851	1/1:7,4:11:29.66:267,30,0	0/0:13,0:12:19.88:0,20,555	0/0:22,0:21:33.04:0,33,918	0/0:16,0:16:48.16:0,48,1496	0/0:24,0:23:69.24:0,69,2256	0/0:33,0:32:99:0,99,3068	0/0:21,0:20:54.19:0,54,1768	0/0:25,0:23:54.19:0,54,1779	0/0:27,0:26:51.13:0,51,1540	0/0:12,0:11:24.08:0,24,671	0/0:28,0:24:69.24:0,69,2256	0/0:33,0:32:75.21:0,75,2381	0/0:13,0:11:30.10:0,30,966
chr10	49189094	.	T	TCTAC	4515.27	PASS	AB=0.742;AC=12;AF=0.231;AN=52;BaseQRankSum=-10.008;DP=624;FS=0.000;HRun=0;HaplotypeScore=148.7067;InbreedingCoeff=0.7354;MQ=51.09;MQ0=3;MQRankSum=4.105;QD=25.80;ReadPosRankSum=-0.486;VQSLOD=4.6305;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:24:23.18:0,23,295	0/0:8,0:8:9.03:0,9,138	./.	./.	0/0:25,0:25:27.09:0,27,406	1/1:12,8:19:32.93:707,33,0	1/1:10,4:14:15.05:351,15,0	0/0:34,0:33:6:0,6,55	0/1:18,7:26:10.01:660,0,10	0/0:21,0:14:12.02:0,12,146	0/0:16,0:15:15.05:0,15,229	0/0:23,0:21:39.12:0,39,578	0/0:23,0:21:33.09:0,33,468	0/0:21,0:21:21.07:0,21,314	0/0:29,0:29:36.12:0,36,553	0/0:13,0:13:14.89:0,15,113	0/0:14,0:14:12.02:0,12,162	0/0:23,0:22:24.05:0,24,363	1/1:9,6:15:21.07:472,21,0	0/1:14,8:22:22.08:382,0,22	1/1:28,11:38:32.09:1453,32,0	0/0:22,0:21:24.07:0,24,351	0/0:22,0:21:24.08:0,24,368	0/0:25,0:24:29.93:0,30,408	0/0:11,0:10:12.04:0,12,184	0/0:30,0:26:39.06:0,39,548	1/1:21,13:37:20.84:490,21,0	0/0:13,0:11:30.10:0,30,461
chr10	49189828	.	G	GT	1736.07	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=5.100;DP=632;FS=12.976;HRun=8;HaplotypeScore=188.7677;InbreedingCoeff=0.0782;MQ=60.71;MQ0=5;MQRankSum=-8.094;QD=4.90;ReadPosRankSum=1.120;VQSLOD=-0.2482;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,21:29:65.38:743,65,0	1/1:1,6:7:12.04:139,12,0	0/0:33,0:16:8.01:0,8,122	0/1:22,0:13:27.23:27,0,86	0/1:32,0:31:27.81:79,0,28	0/0:19,1:20:37.76:0,38,382	0/0:20,0:20:50.99:0,51,458	0/0:39,0:35:5.72:0,6,143	0/0:18,0:18:45:0,45,402	0/1:26,0:26:31.21:31,0,124	0/1:22,0:21:19.48:19,0,135	0/1:21,0:21:37.43:37,0,41	0/1:15,0:15:25.34:25,0,58	1/1:17,0:17:12.85:60,13,0	1/1:8,23:31:32.44:625,32,0	0/0:26,0:26:59.88:0,60,534	0/1:21,0:21:4.72:5,0,20	0/0:11,0:11:6.84:0,7,38	0/0:37,0:37:97.13:0,97,841	0/0:23,0:22:43.71:0,44,404	0/0:13,0:14:26.05:0,26,225	0/1:32,0:32:30.10:30,0,131	0/1:20,0:17:12.42:12,0,35	0/0:14,0:14:2.61:0,3,27	0/1:21,0:21:49.97:50,0,57	0/1:34,0:33:24.70:25,0,138	0/0:22,0:22:42.87:0,43,378	1/1:4,0:4:0.55:3,1,0
chr10	49189837	.	G	GT	5055.96	PASS	AB=0.804;AC=28;AF=0.500;AN=56;BaseQRankSum=3.161;DP=637;FS=0.368;HRun=8;HaplotypeScore=115.7562;InbreedingCoeff=0.6197;MQ=53.99;MQ0=5;MQRankSum=-8.456;QD=12.83;ReadPosRankSum=-0.872;VQSLOD=3.9683;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:36.52:0,37,334	0/0:6,0:6:7.27:0,7,43	0/1:31,0:11:4.77:5,0,50	0/1:23,0:11:5.46:5,0,68	1/1:22,9:30:46.32:493,46,0	0/0:20,0:21:19.61:0,20,339	0/0:20,0:20:53.66:0,54,432	0/1:32,7:36:9.52:525,0,10	0/0:19,0:19:41.57:0,42,316	1/1:22,8:28:42.10:454,42,0	1/1:14,9:22:22.36:393,22,0	1/1:10,7:17:15.35:168,15,0	1/1:11,6:18:18.82:304,19,0	0/1:7,10:17:14.81:250,0,15	0/0:27,0:27:57.81:0,58,314	0/0:22,0:22:57.04:0,57,419	1/1:6,15:21:30.05:352,30,0	1/1:3,7:10:8.05:169,8,0	0/0:32,0:32:79.79:0,80,726	0/0:27,0:27:37.52:0,38,372	0/0:15,0:15:23.95:0,24,211	1/1:21,9:31:15.01:501,15,0	1/1:16,7:20:33.52:417,34,0	1/1:3,9:12:9.03:106,9,0	0/1:17,8:25:0.39:272,0,0	1/1:16,17:33:24.24:575,24,0	0/0:22,0:22:42.39:0,42,367	0/1:2,3:5:9.66:66,0,10
chr10	49189844	.	G	GTT	3200.31	PASS	AB=0.937;AC=37;AF=0.661;AN=56;BaseQRankSum=0.736;DP=620;FS=7.660;HRun=12;HaplotypeScore=125.5180;InbreedingCoeff=0.1421;MQ=53.12;MQ0=5;MQRankSum=-2.087;QD=6.07;ReadPosRankSum=-1.470;VQSLOD=0.5427;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:29:45.08:0,45,399	0/0:8,0:8:11.98:0,12,106	0/0:26,0:8:9.21:0,9,76	0/1:20,0:10:18.79:19,0,19	1/1:34,0:33:31.59:165,32,0	0/1:16,0:20:36.28:234,0,36	1/1:8,1:20:8.43:149,8,0	0/1:43,0:38:31.69:94,0,32	0/1:4,0:18:14.78:78,0,15	1/1:27,0:26:14.23:82,14,0	0/1:20,0:19:2.73:10,0,3	1/1:16,0:16:11.40:51,11,0	1/1:17,0:17:9.93:53,10,0	0/1:18,0:17:30.28:55,0,30	0/0:30,0:30:50.67:0,51,467	1/1:2,3:22:43.67:247,44,0	1/1:20,0:20:11.18:29,11,0	0/1:9,0:10:3.47:27,0,3	1/1:13,15:29:23.29:477,23,0	1/1:5,20:26:54.47:643,54,0	1/1:2,13:15:18.06:252,18,0	0/1:27,0:27:10.44:91,0,10	1/1:22,0:19:18.21:77,18,0	1/1:10,0:10:1.25:4,1,0	0/1:21,0:21:12.30:48,0,12	0/1:33,0:32:7.41:61,0,7	1/1:5,14:23:27.56:367,28,0	0/1:11,0:11:8.42:64,0,8
chr10	49191918	.	TC	T	333.56	PASS	AB=0.640;AC=15;AF=0.500;AN=30;BaseQRankSum=-3.189;DP=54;FS=2.688;HRun=6;HaplotypeScore=17.2754;InbreedingCoeff=-0.0611;MQ=61.19;MQ0=2;MQRankSum=-0.448;QD=11.91;ReadPosRankSum=0.764;VQSLOD=0.1876;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:2,4:4:16.44:76,0,16	./.	0/0:6,0:3:6.02:0,6,72	./.	./.	0/0:2,0:2:3.01:0,3,37	0/1:2,2:4:26.19:26,0,33	1/1:0,3:3:9.01:89,9,0	1/1:0,1:1:3.01:32,3,0	./.	./.	0/1:3,3:5:27.43:84,0,27	./.	1/1:0,1:1:3.01:32,3,0	./.	0/0:1,0:1:3.01:0,3,39	0/1:1,2:2:20.77:26,0,21	1/1:0,1:1:2.90:16,3,0	./.	./.	0/0:3,4:5:0:0,0,0	./.	1/1:0,1:1:3.01:32,3,0	0/0:3,0:3:2.99:0,3,23	./.	./.	0/1:1,1:2:26.23:26,0,33	./.
chr10	49193028	.	TATTTCA	T	3889.38	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=11.337;DP=749;FS=3.163;HRun=0;HaplotypeScore=150.6285;InbreedingCoeff=0.9999;MQ=84.46;MQ0=0;MQRankSum=-12.247;QD=53.28;ReadPosRankSum=1.139;VQSLOD=4.0386;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,28:30:60.16:1369,60,0	1/1:2,12:14:36.12:862,36,0	0/0:26,0:26:78.27:0,78,2611	0/0:21,0:21:63.22:0,63,1958	0/0:33,0:33:99:0,99,3483	0/0:27,0:27:81.28:0,81,2794	0/0:19,0:19:57.20:0,57,1989	0/0:36,0:36:99:0,105,3579	0/0:24,0:24:72.25:0,72,2480	0/0:42,0:42:99:0,126,4480	0/0:34,0:34:99:0,102,3506	0/0:20,0:20:60.21:0,60,2075	0/0:32,0:32:87.30:0,87,3057	0/0:27,0:27:78.27:0,78,2720	1/1:3,26:29:69.24:1658,69,0	0/0:33,0:33:96.33:0,96,3462	0/0:21,0:21:60.21:0,60,2044	0/0:22,0:22:60.21:0,60,2092	0/0:21,0:21:60.20:0,60,2027	0/0:25,0:25:75.26:0,75,2699	0/0:27,0:27:81.28:0,81,2859	0/0:34,0:34:93.32:0,93,3284	0/0:26,0:26:78.27:0,78,2644	0/0:15,0:15:45.15:0,45,1566	0/0:29,0:29:87.30:0,87,3138	0/0:33,0:33:93.32:0,93,3355	0/0:32,0:32:96.33:0,96,3415	0/0:17,0:17:45.15:0,45,1377
chr10	49194039	.	T	TATACACACAC	10123.98	PASS	AB=0.632;AC=27;AF=0.500;AN=54;BaseQRankSum=-5.284;DP=835;FS=2.154;HRun=0;HaplotypeScore=263.0075;InbreedingCoeff=0.6867;MQ=53.48;MQ0=13;MQRankSum=-4.603;QD=24.34;ReadPosRankSum=-2.931;VQSLOD=3.7752;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:25:31.10:0,31,219	0/1:9,0:13:53.84:54,0,180	0/0:39,0:11:23.10:0,23,230	0/0:40,0:18:26.80:0,27,270	./.	0/0:23,0:24:63.46:0,63,1324	0/0:31,0:34:73.47:0,73,2175	1/1:42,0:41:90.34:2075,90,0	0/0:39,0:39:99:0,117,2337	1/1:8,21:38:86.11:1289,86,0	0/0:6,16:28:0.11:0,0,0	1/1:8,0:30:24.02:767,24,0	1/1:7,18:39:23.60:925,24,0	1/1:10,15:28:5.36:312,5,0	0/1:7,0:30:26.49:26,0,160	0/0:16,0:42:95.17:0,95,1840	1/1:14,2:16:29.95:686,30,0	0/1:5,16:21:9.90:383,0,10	0/0:9,0:11:33.03:0,33,400	0/0:10,0:18:37.95:0,38,479	0/0:31,0:62:99:0,136,2390	1/1:5,21:30:6.02:319,6,0	1/1:5,12:20:2.98:159,3,0	1/1:3,16:26:9.02:460,9,0	1/1:5,20:29:9.50:481,10,0	1/1:14,20:38:48.98:1755,49,0	0/0:7,0:29:73.96:0,74,1601	1/1:12,1:13:35.70:434,36,0
chr10	49194728	.	CA	C	15681.03	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=18.054;DP=849;FS=1.085;HRun=2;HaplotypeScore=83.0116;InbreedingCoeff=0.9999;MQ=81.89;MQ0=0;MQRankSum=-2.816;QD=36.55;ReadPosRankSum=3.497;VQSLOD=5.4506;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:66,0:66:99:0,196,2847	0/0:10,0:10:30.10:0,30,444	0/0:21,0:21:57.17:0,57,841	0/0:24,0:24:69.19:0,69,975	1/1:1,26:27:69.22:896,69,0	0/0:28,0:28:78.24:0,78,1129	0/0:38,0:38:99:0,114,1690	1/1:0,32:32:96.27:1222,96,0	0/0:28,0:28:84.28:0,84,1253	1/1:2,29:31:87.26:1113,87,0	1/1:0,17:17:48.16:623,48,0	1/1:0,37:37:99:1363,105,0	1/1:2,32:34:90.29:1168,90,0	1/1:1,45:46:99:1704,132,0	0/0:49,0:49:99:0,141,2091	0/0:33,0:33:99:0,99,1449	1/1:1,41:42:99:1558,120,0	1/1:1,19:20:57.19:740,57,0	0/0:23,0:23:69.23:0,69,1002	0/0:29,0:29:81.27:0,81,1191	0/0:40,0:40:99:0,120,1736	1/1:1,26:27:69.22:896,69,0	1/1:1,15:16:45.15:584,45,0	1/1:1,32:33:93.30:1207,93,0	1/1:0,30:30:90.29:1169,90,0	1/1:0,24:24:72.23:932,72,0	0/0:31,0:30:93.30:0,93,1359	1/1:0,13:13:39.13:506,39,0
chr10	49194860	.	G	GTGGA	25087.76	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-17.506;DP=833;FS=2.654;HRun=0;HaplotypeScore=132.9148;InbreedingCoeff=0.9919;MQ=80.41;MQ0=0;MQRankSum=-4.385;QD=60.60;ReadPosRankSum=3.347;VQSLOD=6.7276;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:64,0:64:99:0,181,3336	0/0:16,0:16:48.16:0,48,894	0/0:32,0:32:87.04:0,87,1370	0/0:26,0:27:64.30:0,64,1006	1/1:9,30:40:72.25:1918,72,0	0/0:31,0:31:93.32:0,93,1735	0/0:28,0:28:72.25:0,72,1333	1/1:10,31:42:99:2904,117,0	0/0:26,0:26:72.22:0,72,1270	1/1:2,27:30:84.27:2138,84,0	1/1:2,9:12:30.10:783,30,0	1/1:1,32:34:87.30:2293,87,0	1/1:6,26:33:75.26:1970,75,0	1/1:5,28:35:90.31:2333,90,0	0/0:43,0:43:99:0,120,2167	0/0:42,0:42:99:0,117,2118	1/1:4,30:37:75.26:1991,75,0	1/1:2,23:24:66.22:1664,66,0	0/0:20,0:20:60.13:0,60,1015	0/0:27,0:27:72.25:0,72,1335	0/0:34,0:34:90.25:0,90,1581	1/1:4,27:31:66.23:1757,66,0	1/1:0,19:20:39.07:1037,39,0	1/1:4,23:27:57.19:1418,57,0	1/1:3,11:14:33.11:879,33,0	1/1:6,21:28:69.24:1762,69,0	0/0:29,0:29:78.27:0,78,1447	1/1:2,3:5:9.03:240,9,0
chr10	49197048	.	CT	C	17516.98	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=16.173;DP=673;FS=0.640;HRun=2;HaplotypeScore=114.7161;InbreedingCoeff=0.9983;MQ=85.45;MQ0=0;MQRankSum=-4.742;QD=36.34;ReadPosRankSum=2.263;VQSLOD=4.6088;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,108,1717	0/0:8,0:8:24.08:0,24,384	0/0:27,0:27:78.21:0,78,1186	0/0:17,0:17:51.16:0,51,775	1/1:0,21:21:60.19:777,60,0	0/0:21,0:21:63.21:0,63,1003	0/0:23,0:23:69.22:0,69,1080	1/1:1,21:22:60.18:753,60,0	0/0:25,0:25:75.26:0,75,1198	1/1:0,24:24:65.60:855,66,0	1/1:2,17:19:51.17:662,51,0	1/1:0,27:27:75.22:973,75,0	1/1:1,19:20:57.19:740,57,0	1/1:1,32:33:93.30:1204,93,0	0/0:34,0:34:99:0,102,1602	1/1:1,25:26:72.23:934,72,0	1/1:1,31:32:90.29:1168,90,0	1/1:0,18:18:48.15:612,48,0	1/1:0,15:15:45.14:572,45,0	1/1:0,20:20:57.19:740,57,0	1/1:2,44:46:99:1734,135,0	1/1:0,29:29:78.25:1012,78,0	1/1:0,12:12:36.12:467,36,0	1/1:0,23:23:63.20:818,63,0	1/1:0,18:18:51.17:665,51,0	1/1:0,29:29:87.28:1124,87,0	1/1:3,39:42:99:1473,114,0	1/1:0,6:6:18.06:234,18,0
chr10	49198490	.	GGA	G	16881.04	PASS	AB=0.955;AC=47;AF=0.839;AN=56;BaseQRankSum=-0.511;DP=677;FS=2.066;HRun=0;HaplotypeScore=95.2870;InbreedingCoeff=0.8713;MQ=79.81;MQ0=5;MQRankSum=-3.402;QD=28.00;ReadPosRankSum=3.355;VQSLOD=6.3147;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,41:41:95.66:1220,96,0	1/1:2,7:9:21.07:267,21,0	0/0:21,0:21:33.94:0,34,685	0/1:20,1:21:13.05:13,0,481	1/1:5,23:28:59.89:763,60,0	0/0:17,0:17:48.16:0,48,803	0/0:20,0:20:51.17:0,51,854	1/1:6,31:37:92.56:1168,93,0	0/0:16,0:16:45.15:0,45,749	1/1:4,24:28:72.23:913,72,0	1/1:4,18:22:36.06:491,36,0	1/1:6,21:27:54.17:687,54,0	1/1:4,23:27:63.03:801,63,0	1/1:6,20:26:51.16:649,51,0	1/1:3,25:28:69.02:878,69,0	1/1:6,15:21:39.12:496,39,0	1/1:3,27:30:75.24:955,75,0	1/1:1,22:23:63.20:801,63,0	1/1:6,19:25:57.16:699,57,0	1/1:4,22:25:63.20:802,63,0	1/1:3,34:36:81.26:1031,81,0	1/1:2,13:13:20.64:267,21,0	1/1:5,10:15:30.98:384,31,0	1/1:3,24:27:66.21:840,66,0	1/1:5,21:25:59.47:762,59,0	1/1:5,25:30:74.32:923,74,0	1/1:3,24:27:63.07:801,63,0	1/1:0,7:7:21.07:267,21,0
chr10	49200658	.	TGA	T	9010.70	PASS	AB=0.563;AC=29;AF=0.518;AN=56;BaseQRankSum=19.403;DP=617;FS=0.000;HRun=0;HaplotypeScore=155.7529;InbreedingCoeff=0.9249;MQ=80.76;MQ0=0;MQRankSum=-18.129;QD=31.18;ReadPosRankSum=1.848;VQSLOD=6.5425;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,114,2182	0/0:5,0:5:15.03:0,15,256	0/0:28,0:28:84.25:0,84,1497	0/0:25,0:25:72.25:0,72,1338	1/1:1,19:22:43.77:483,44,0	0/0:29,0:29:87.27:0,87,1613	0/0:23,0:23:69.22:0,69,1290	1/1:6,11:17:33.10:449,33,0	0/0:21,0:21:60.19:0,60,1125	1/1:4,20:24:57.04:838,57,0	1/1:5,9:14:25.57:280,26,0	1/1:8,26:34:83.94:1098,84,0	1/1:5,18:23:54.17:708,54,0	1/1:6,15:21:51.16:661,51,0	0/0:33,0:33:99:0,99,1862	0/0:39,0:39:99:0,117,2260	1/1:2,11:13:39.13:532,39,0	1/1:2,13:15:36.12:516,36,0	0/0:17,0:17:51.03:0,51,891	0/0:21,0:21:63.22:0,63,1215	0/0:19,0:19:57.18:0,57,1038	1/1:3,19:22:59.97:685,60,0	1/1:2,14:16:40.67:467,41,0	0/1:2,7:9:41.34:144,0,41	1/1:5,15:20:54.18:713,54,0	1/1:4,28:32:87.24:1192,87,0	0/0:30,0:30:90.29:0,90,1695	1/1:4,3:7:18.06:244,18,0
chr10	49200663	.	A	ACCCCT	23091.94	PASS	AB=0.682;AC=29;AF=0.518;AN=56;BaseQRankSum=18.094;DP=615;FS=0.000;HRun=0;HaplotypeScore=153.7931;InbreedingCoeff=0.9097;MQ=74.02;MQ0=0;MQRankSum=-18.863;QD=76.72;ReadPosRankSum=0.325;VQSLOD=6.3877;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,114,2604	0/0:4,0:4:12.04:0,12,280	0/0:23,0:23:66.21:0,66,1478	0/0:20,0:20:57.16:0,57,1279	1/1:5,19:24:39.13:1164,39,0	0/0:27,0:27:81.26:0,81,1841	0/0:23,0:23:69.24:0,69,1588	1/1:13,7:20:51.08:1472,51,0	0/0:22,0:22:63.20:0,63,1400	1/1:9,17:27:78.12:2154,78,0	1/1:7,8:16:24.06:699,24,0	1/1:4,26:30:90.31:2674,90,0	1/1:8,18:26:75.24:2227,75,0	1/1:4,15:19:57.17:1628,57,0	0/0:32,0:32:96.33:0,96,2236	0/0:39,0:39:99:0,117,2726	1/1:5,11:16:45.15:1384,45,0	1/1:2,13:15:42.14:1360,42,0	0/0:16,0:16:48.15:0,48,1024	0/0:23,0:23:63.20:0,63,1399	0/0:18,0:18:54.19:0,54,1258	1/1:2,18:21:60.21:1701,60,0	1/1:3,14:17:42.14:1258,42,0	0/1:8,7:15:42.81:710,0,43	1/1:6,15:21:57.20:1666,57,0	1/1:2,28:30:90.31:2800,90,0	0/0:29,0:29:87.30:0,87,2021	1/1:1,3:4:6.02:194,6,0
chr10	49202605	.	ATTCTTT	A	9094.61	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=9.528;DP=636;FS=1.175;HRun=0;HaplotypeScore=165.4656;InbreedingCoeff=0.9980;MQ=88.28;MQ0=0;MQRankSum=-14.190;QD=64.50;ReadPosRankSum=1.362;VQSLOD=5.4458;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,25:25:58.44:1416,58,0	1/1:0,13:13:36.12:885,36,0	0/0:35,0:35:99:0,105,3589	0/0:28,0:28:84.15:0,84,2770	0/0:23,0:23:60.19:0,60,2044	0/0:19,0:19:57.18:0,57,1938	0/0:23,0:23:69.24:0,69,2626	0/0:29,0:29:87.29:0,87,3069	0/0:28,0:28:84.29:0,84,3166	0/0:27,0:27:81.28:0,81,3033	0/0:26,0:26:75.24:0,75,2559	0/0:27,0:27:81.28:0,81,2956	0/0:30,0:30:87.30:0,87,3084	0/0:31,0:31:90.31:0,90,3222	1/1:0,31:31:90.31:2232,90,0	0/0:26,0:26:78.27:0,78,2870	0/0:15,0:15:42.14:0,42,1452	0/0:11,0:11:30.10:0,30,1089	1/1:0,13:13:39.13:972,39,0	1/1:0,28:28:78.14:1711,78,0	1/1:0,10:10:18.06:455,18,0	0/0:23,0:23:69.24:0,69,2442	0/0:22,0:22:66.21:0,66,2264	0/0:17,0:16:48.14:0,48,1637	0/0:17,0:17:48.16:0,48,1685	0/0:29,0:29:84.28:0,84,3086	1/1:0,21:21:57.20:1424,57,0	0/0:9,0:9:24.08:0,24,838
chr10	49202679	.	AACACATCTCCCC	A	29659.05	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=16.306;DP=687;FS=4.033;HRun=0;HaplotypeScore=271.8242;InbreedingCoeff=0.9716;MQ=67.84;MQ0=0;MQRankSum=-15.501;QD=80.60;ReadPosRankSum=3.801;VQSLOD=4.5755;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:90.31:0,90,5416	0/0:13,0:13:33.11:0,33,1973	0/0:21,0:21:63.22:0,63,3210	0/0:20,0:20:60.07:0,60,2964	1/1:2,36:38:93.28:3347,93,0	0/0:23,0:23:66.21:0,66,3609	0/0:30,0:30:90.27:0,90,4725	1/1:6,23:29:69.05:1750,69,0	0/0:17,0:17:48.16:0,48,2247	1/1:4,21:25:60.17:2052,60,0	1/1:2,22:24:66.23:2527,66,0	1/1:6,22:28:54.19:2082,54,0	1/1:5,19:24:48.16:1845,48,0	1/1:1,23:24:60.21:2307,60,0	0/0:35,0:35:90.31:0,90,5472	0/0:25,0:25:72.25:0,72,4242	1/1:2,15:17:30.10:1150,30,0	1/1:6,9:15:12.04:463,12,0	0/0:18,0:18:54.19:0,54,2895	0/0:25,0:25:63.22:0,63,3942	0/0:19,0:19:51.18:0,51,3105	1/1:2,19:21:45.15:1735,45,0	1/1:2,30:32:74.95:2649,75,0	1/1:2,15:17:27.09:955,27,0	1/1:4,26:30:75.26:2892,75,0	1/1:4,37:41:99:3790,105,0	0/0:36,0:36:87.30:0,87,5128	1/1:1,2:3:3.01:116,3,0
chr10	49202921	.	A	AT	8578.59	PASS	AB=1.000;AC=31;AF=0.554;AN=56;BaseQRankSum=16.882;DP=606;FS=2.306;HRun=7;HaplotypeScore=136.7519;InbreedingCoeff=0.9021;MQ=68.38;MQ0=0;MQRankSum=-6.138;QD=24.65;ReadPosRankSum=-0.230;VQSLOD=3.0366;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:89.72:0,90,822	0/0:12,0:12:35.81:0,36,316	0/0:12,0:12:1.41:0,1,140	0/1:8,0:8:10.65:11,0,18	1/1:3,27:30:71.68:742,72,0	0/0:23,0:22:60.09:0,60,575	0/0:12,0:12:33.02:0,33,309	1/1:11,23:36:76.69:846,77,0	0/0:22,0:22:57.07:0,57,542	1/1:8,21:29:63.05:694,63,0	1/1:2,21:24:65.95:703,66,0	1/1:4,14:19:45.07:503,45,0	1/1:4,17:21:51.74:595,52,0	1/1:5,20:25:54.16:629,54,0	0/0:23,0:23:59.63:0,60,526	0/0:23,0:23:63.01:0,63,586	1/1:7,17:24:42.12:490,42,0	1/1:2,19:22:55.55:615,56,0	0/0:22,0:22:61.73:0,62,530	0/0:28,0:28:68.40:0,68,614	0/0:10,0:10:18:0,18,166	1/1:4,9:13:30.04:336,30,0	1/1:5,14:20:34.56:400,35,0	1/1:2,14:16:32.64:383,33,0	1/1:2,23:25:54.15:615,54,0	1/1:4,23:27:54.96:749,55,0	0/0:40,0:40:99:0,114,1071	1/1:1,8:9:24.05:268,24,0
chr10	49203738	.	TAGAC	T	5946.95	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=14.157;DP=803;FS=1.226;HRun=0;HaplotypeScore=131.7177;InbreedingCoeff=0.9840;MQ=86.52;MQ0=0;MQRankSum=-4.536;QD=48.35;ReadPosRankSum=0.592;VQSLOD=5.1503;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,135,3578	0/0:14,0:14:42.12:0,42,1081	0/0:27,0:27:77.75:0,78,1859	0/0:28,0:28:66.41:0,66,1751	0/0:26,0:26:72.23:0,72,1913	0/0:27,0:27:72.25:0,72,1928	0/0:25,0:25:75.26:0,75,2013	0/0:31,0:31:93.30:0,93,2392	0/0:33,0:33:99:0,99,2712	0/0:35,0:35:96.80:0,97,2631	0/0:23,0:23:63.21:0,63,1668	0/0:33,0:33:93.32:0,93,2528	0/0:46,0:46:99:0,138,3704	0/0:40,0:40:99:0,117,3146	0/0:37,0:37:99:0,108,2895	0/0:34,0:34:99:0,102,2731	0/0:28,0:28:84.29:0,84,2287	0/0:25,0:25:72.25:0,72,1894	1/1:2,23:25:69.24:1327,69,0	1/1:1,17:18:42.14:767,42,0	1/1:4,54:58:99:2812,154,0	0/0:21,0:21:63.22:0,63,1680	0/0:21,0:21:60.19:0,60,1551	0/0:25,0:25:75.26:0,75,2041	0/0:25,0:25:72.24:0,72,1882	0/0:28,0:28:81.26:0,81,2085	1/1:1,21:22:54.19:1041,54,0	0/0:3,0:3:9.03:0,9,247
chr10	49205054	.	TC	T	13904.60	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=14.797;DP=767;FS=28.806;HRun=2;HaplotypeScore=78.4000;InbreedingCoeff=0.9994;MQ=85.71;MQ0=1;MQRankSum=-1.693;QD=35.84;ReadPosRankSum=2.754;VQSLOD=2.8530;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:57:99:0,166,2427	0/0:13,0:13:39.13:0,39,570	0/0:18,0:18:51.17:0,51,751	0/0:31,0:31:86.65:0,87,1161	1/1:0,23:23:60.20:779,60,0	0/0:20,0:19:60.18:0,60,859	0/0:41,0:41:99:0,120,1729	1/1:1,34:35:99:1270,102,0	0/0:25,0:25:72.24:0,72,1078	1/1:0,22:22:66.21:856,66,0	1/1:0,15:15:39.13:506,39,0	1/1:0,42:42:99:1519,117,0	1/1:0,20:20:57.19:740,57,0	1/1:0,32:32:90.29:1169,90,0	0/0:36,0:36:99:0,108,1561	0/0:28,0:28:84.28:0,84,1256	1/1:0,33:33:93.30:1207,93,0	1/1:0,28:28:75.24:974,75,0	0/0:17,0:17:45.14:0,45,653	0/0:20,0:20:60.20:0,60,899	0/0:38,0:38:99:0,111,1654	1/1:0,26:26:72.21:935,72,0	1/1:2,17:19:51.17:662,51,0	1/1:1,38:39:99:1263,99,0	1/1:0,14:14:42.14:545,42,0	1/1:2,31:33:93.30:1206,93,0	0/0:35,0:34:99:0,99,1444	1/1:0,7:7:21.07:273,21,0
chr10	49205432	.	G	GGGGGT	1531.05	PASS	AC=16;AF=0.381;AN=42;BaseQRankSum=2.072;DP=309;FS=18.202;HRun=0;HaplotypeScore=73.1184;InbreedingCoeff=0.7825;MQ=100.54;MQ0=11;MQRankSum=-6.157;QD=28.89;ReadPosRankSum=-1.159;VQSLOD=1.7007;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:33.11:0,33,615	0/0:8,0:8:15.05:0,15,280	0/0:55,0:38:33.77:0,34,542	0/0:59,0:23:21.34:0,21,246	./.	0/0:15,0:15:24.07:0,24,407	0/0:12,0:12:15.04:0,15,250	./.	0/0:7,0:7:12.04:0,12,216	1/1:5,0:5:6.01:105,6,0	1/1:1,3:4:9.03:256,9,0	./.	1/1:2,2:4:9.03:257,9,0	1/1:3,4:8:12.04:340,12,0	0/0:10,0:10:27.09:0,27,496	0/0:2,0:2:3.01:0,3,56	1/1:14,2:16:15.05:345,15,0	1/1:5,0:5:2.72:68,3,0	0/0:4,0:4:3.01:0,3,56	0/0:10,0:10:21.07:0,21,391	0/0:13,0:13:18.06:0,18,312	1/1:5,2:7:9.03:237,9,0	./.	./.	./.	1/1:3,1:4:3.01:85,3,0	0/0:11,0:11:30.10:0,30,559	./.
chr10	49208542	.	TACACACACACACACACACACACACAC	T	1809.53	PASS	AC=14;AF=0.538;AN=26;BaseQRankSum=4.565;DP=190;FS=0.000;HRun=0;HaplotypeScore=242.1269;InbreedingCoeff=0.7381;MQ=75.62;MQ0=5;MQRankSum=-2.969;QD=22.07;ReadPosRankSum=-1.031;VQSLOD=2.2955;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:19:4.83:103,5,0	1/1:1,0:5:6.02:230,6,0	0/0:26,0:20:21.07:0,21,792	0/0:16,0:13:3.01:0,3,68	./.	0/0:16,0:16:21.07:0,21,1371	0/0:11,0:14:27.09:0,27,1896	./.	0/0:9,0:13:16.61:0,17,1062	./.	./.	./.	./.	./.	1/1:7,0:11:6.02:363,6,0	0/0:13,0:21:21.07:0,21,1788	./.	./.	1/1:8,2:10:6.02:405,6,0	1/1:8,8:16:15.67:485,16,0	1/1:9,0:8:3.01:66,3,0	./.	./.	./.	./.	./.	1/1:8,4:12:8.86:282,9,0	./.
chr10	49209143	.	G	GA	382.16	PASS	AC=16;AF=0.381;AN=42;BaseQRankSum=5.937;DP=412;FS=14.214;HRun=0;HaplotypeScore=54.0919;InbreedingCoeff=0.7960;MQ=98.75;MQ0=0;MQRankSum=-3.348;QD=19.11;ReadPosRankSum=-6.153;VQSLOD=2.3876;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,138,1905	0/0:18,0:18:54.18:0,54,753	0/0:26,0:26:75:0,75,983	0/0:19,0:19:27.43:0,27,620	1/1:1,0:1:2.97:20,3,0	0/0:26,0:26:75.22:0,75,1014	0/0:37,0:37:99:0,108,1493	1/1:0,4:4:12.04:165,12,0	0/0:27,0:27:78.24:0,78,1058	1/1:0,3:3:9.03:134,9,0	1/1:1,3:4:3.01:43,3,0	./.	1/1:0,2:2:5.99:67,6,0	./.	0/0:43,0:43:99:0,126,1733	0/0:34,0:34:99:0,102,1375	./.	./.	0/0:20,0:20:60.20:0,60,839	0/0:23,0:23:63.21:0,63,881	0/0:46,0:46:99:0,135,1829	1/1:1,1:2:2.98:21,3,0	./.	./.	1/1:2,0:2:5.95:42,6,0	1/1:2,0:2:3.01:44,3,0	0/0:26,0:26:78.18:0,78,1013	./.
chr10	49209786	.	CAT	C	13933	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=13.254;DP=630;FS=0.613;HRun=0;HaplotypeScore=83.7492;InbreedingCoeff=0.9994;MQ=81.70;MQ0=0;MQRankSum=-1.601;QD=39.70;ReadPosRankSum=2.874;VQSLOD=6.8902;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:60.21:0,60,1088	0/0:8,0:8:24.08:0,24,440	0/0:24,0:24:66.23:0,66,1188	0/0:9,0:9:27.09:0,27,477	1/1:2,20:22:54.18:774,54,0	0/0:23,0:23:63.22:0,63,1155	0/0:22,0:22:60.21:0,60,1089	1/1:1,31:32:90.26:1233,90,0	0/0:21,0:21:63.22:0,63,1145	1/1:1,27:28:81.26:1142,81,0	1/1:1,23:24:66.22:946,66,0	1/1:0,23:23:63.21:903,63,0	1/1:2,28:30:72.24:1032,72,0	1/1:0,34:34:99:1411,99,0	0/0:35,0:35:99:0,99,1783	0/0:30,0:30:87.30:0,87,1595	1/1:0,15:15:45.15:645,45,0	1/1:1,15:16:42.14:602,42,0	0/0:26,0:26:72.16:0,72,1259	0/0:30,0:30:87.27:0,87,1535	0/0:9,0:9:27.07:0,27,463	1/1:0,24:24:69.23:989,69,0	1/1:1,14:15:42.14:597,42,0	1/1:0,19:19:57.19:817,57,0	1/1:1,27:28:81.27:1161,81,0	1/1:1,29:30:87.26:1209,87,0	0/0:21,0:21:60.21:0,60,1090	1/1:0,11:11:33.11:473,33,0
chr10	49210163	.	GGA	G	4070.47	PASS	AB=1.000;AC=25;AF=0.446;AN=56;BaseQRankSum=-4.860;DP=774;FS=5.719;HRun=0;HaplotypeScore=138.3742;InbreedingCoeff=0.2253;MQ=60.38;MQ0=16;MQRankSum=0.964;QD=10.23;ReadPosRankSum=-0.812;VQSLOD=2.5989;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,34:42:97.86:1191,98,0	1/1:2,9:11:24.07:298,24,0	0/0:67,0:30:10.11:0,10,477	0/0:94,2:35:6.32:0,6,301	0/1:26,0:26:68.14:68,0,168	0/0:27,0:26:62.04:0,62,933	0/0:30,0:29:72.22:0,72,1115	0/1:29,0:28:56.27:56,0,199	0/0:24,0:24:63.21:0,63,1003	0/1:31,0:31:12:12,0,282	0/1:19,0:19:41.26:41,0,144	0/1:25,0:24:39.82:40,0,247	0/1:30,0:29:42.96:43,0,212	0/0:31,0:31:5.88:0,6,336	1/1:8,28:36:63.20:777,63,0	0/0:38,3:41:56.09:0,56,1388	0/0:25,0:23:20.06:0,20,301	0/1:13,0:12:36.37:36,0,88	1/1:7,10:13:24.08:298,24,0	1/1:6,12:18:21.07:260,21,0	1/1:3,17:20:39.12:480,39,0	0/1:13,0:13:6.44:6,0,156	0/1:13,0:13:0:0,0,108	0/1:22,0:21:81.92:82,0,118	0/1:16,0:16:9.49:9,0,133	0/0:27,0:27:19.53:0,20,330	1/1:5,12:17:30.09:372,30,0	0/0:8,0:8:17.58:0,18,105
chr10	49210176	.	G	GA	11016.29	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-9.242;DP=791;FS=0.310;HRun=1;HaplotypeScore=117.0624;InbreedingCoeff=0.9385;MQ=60.67;MQ0=22;MQRankSum=-2.979;QD=35.54;ReadPosRankSum=-0.174;VQSLOD=4.3968;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:39.03:0,39,290	0/0:10,0:10:19.96:0,20,70	0/0:92,0:40:68.42:0,68,863	0/0:113,0:41:32.70:0,33,531	1/1:1,23:24:58.44:855,58,0	0/0:24,0:23:62.79:0,63,799	0/0:28,0:27:81.24:0,81,1023	1/1:3,32:32:86.39:1201,86,0	0/0:22,0:22:62.94:0,63,811	1/1:4,20:24:66.22:962,66,0	1/1:4,14:18:42.10:594,42,0	1/1:5,20:22:63.18:902,63,0	1/1:1,22:21:57.19:845,57,0	1/1:0,26:26:72.20:1045,72,0	0/0:32,0:32:3.84:0,4,188	0/0:38,0:38:98.81:0,99,1245	1/1:2,21:21:48.44:834,48,0	1/1:4,10:12:31.63:422,32,0	0/0:17,0:12:19.09:0,19,199	0/0:15,0:15:20.40:0,20,81	0/0:29,0:29:29.77:0,30,415	1/1:2,15:17:42.06:571,42,0	1/1:3,9:12:30.02:400,30,0	1/1:4,17:20:0.41:483,0,0	1/1:1,13:14:36.08:501,36,0	1/1:2,25:26:75.22:1086,75,0	0/0:18,0:18:13.16:0,13,163	1/1:0,7:7:21.07:315,21,0
chr10	49210246	.	GGGAGAA	G	2494.83	PASS	AB=0.826;AC=22;AF=0.393;AN=56;BaseQRankSum=12.483;DP=516;FS=58.221;HRun=0;HaplotypeScore=141.2205;InbreedingCoeff=0.3969;MQ=56.55;MQ0=24;MQRankSum=-9.661;QD=13.20;ReadPosRankSum=0.308;VQSLOD=0.6993;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:83.74:0,84,1748	0/0:4,0:4:12.04:0,12,338	0/0:37,0:10:6.15:0,6,163	0/0:56,0:27:20.46:0,20,410	1/1:7,6:13:13.84:172,14,0	0/0:18,0:18:50.83:0,51,1140	0/0:16,0:16:42.01:0,42,867	0/1:13,0:9:23.24:23,0,28	0/0:19,0:19:53.94:0,54,1571	1/1:13,5:18:43.82:449,44,0	0/1:5,3:8:17.75:47,0,18	1/1:11,3:11:9.52:198,10,0	1/1:7,6:8:7.76:259,8,0	1/1:6,9:9:11.96:227,12,0	0/0:28,0:27:60.01:0,60,1405	0/0:24,0:24:63.13:0,63,1753	0/1:19,3:15:6.74:206,0,7	1/1:8,0:5:1.53:98,2,0	0/0:25,0:21:50.97:0,51,1057	0/0:10,0:10:27.02:0,27,557	0/0:40,0:39:99:0,111,2816	0/1:11,4:15:2.74:149,0,3	0/1:3,6:9:42.12:131,0,42	0/1:12,1:10:99:106,0,110	0/1:8,7:15:9.58:349,0,10	1/1:7,3:10:16.95:256,17,0	0/0:19,0:19:57.01:0,57,1389	0/1:2,0:2:4.20:14,0,4
chr10	49210611	.	TGGA	T	15850.71	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=6.409;DP=564;FS=1.849;HRun=0;HaplotypeScore=91.5588;InbreedingCoeff=0.9943;MQ=60.15;MQ0=19;MQRankSum=-2.960;QD=38.19;ReadPosRankSum=4.139;VQSLOD=5.7668;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,41:39:84.29:1359,84,0	1/1:0,7:7:15.05:233,15,0	0/0:28,0:17:51.10:0,51,923	0/0:32,0:18:47.99:0,48,872	1/1:2,13:15:39.13:622,39,0	0/0:17,0:16:36.08:0,36,756	0/0:23,0:23:63.22:0,63,1383	1/1:2,24:19:57.18:903,57,0	0/0:18,0:17:45.11:0,45,956	1/1:0,17:16:45.15:734,45,0	1/1:2,10:12:18.06:281,18,0	1/1:3,15:14:42.14:685,42,0	1/1:2,33:32:78.27:1271,78,0	1/1:0,21:21:54.06:881,54,0	1/1:0,21:20:60.20:979,60,0	0/0:31,0:27:69.24:0,69,1501	1/1:1,32:29:69.24:1124,69,0	1/1:2,13:15:36.12:588,36,0	1/1:2,8:8:24.08:387,24,0	1/1:2,11:13:36.12:574,36,0	1/1:1,26:26:72.25:1176,72,0	1/1:1,15:15:36.12:575,36,0	1/1:2,15:16:42.14:612,42,0	1/1:1,18:19:42.09:686,42,0	1/1:0,15:15:42.14:662,42,0	1/1:1,12:13:36.12:588,36,0	1/1:1,11:9:27.09:441,27,0	1/1:0,12:10:30.10:490,30,0
chr10	49210856	.	TGG	T	6045.49	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=6.577;DP=560;FS=4.019;HRun=4;HaplotypeScore=61.3102;InbreedingCoeff=0.9043;MQ=36.17;MQ0=74;MQRankSum=-1.475;QD=21.44;ReadPosRankSum=0.794;VQSLOD=2.0141;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:30:42.14:0,42,782	0/0:16,0:13:36.12:0,36,661	0/0:11,0:1:2.99:0,3,23	0/0:9,0:2:6.02:0,6,112	1/1:1,16:14:26.96:325,27,0	0/0:26,0:26:48.16:0,48,894	0/0:26,0:20:39.13:0,39,683	1/1:0,21:18:54.18:795,54,0	0/0:19,0:19:18.06:0,18,336	1/1:1,16:17:45.15:654,45,0	1/1:1,16:14:21.07:309,21,0	1/1:1,22:21:32.70:438,33,0	1/1:0,23:20:42.14:610,42,0	1/1:0,25:21:33.03:463,33,0	0/0:32,0:31:54.01:0,54,968	0/0:30,0:30:71.75:0,72,1337	1/1:2,29:22:21.07:309,21,0	1/1:0,11:9:6.02:88,6,0	0/0:21,0:18:54.19:0,54,999	0/0:15,0:11:30.10:0,30,540	0/0:18,0:12:3.01:0,3,56	1/1:1,16:16:24.04:329,24,0	1/1:1,15:14:23.97:305,24,0	1/1:0,22:20:18.02:241,18,0	1/1:3,14:14:27.05:373,27,0	1/1:0,20:19:51.17:744,51,0	0/0:20,0:17:42.14:0,42,782	1/1:0,5:4:5.98:64,6,0
chr10	49211237	.	G	GA	22864.76	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-8.617;DP=680;FS=5.801;HRun=1;HaplotypeScore=61.8472;InbreedingCoeff=0.9995;MQ=74.40;MQ0=0;MQRankSum=-4.048;QD=41.80;ReadPosRankSum=1.072;VQSLOD=5.3190;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,27:27:72.20:1054,72,0	1/1:0,11:11:24.08:360,24,0	0/0:14,0:14:36.11:0,36,459	0/0:13,0:13:36.11:0,36,456	1/1:0,27:27:75.25:1123,75,0	0/0:25,0:25:75.24:0,75,974	0/0:19,0:19:51.17:0,51,661	1/1:1,38:39:99:1687,114,0	0/0:23,0:23:66.21:0,66,855	1/1:0,23:23:69.23:1033,69,0	1/1:1,13:14:39.13:584,39,0	1/1:0,21:21:63.21:944,63,0	1/1:1,32:33:96.29:1413,96,0	1/1:1,20:21:57.19:854,57,0	1/1:0,28:28:75.25:1124,75,0	0/0:39,0:39:99:0,117,1505	1/1:0,34:34:99:1527,102,0	1/1:0,22:22:60.20:893,60,0	1/1:1,22:23:63.21:945,63,0	1/1:0,33:33:96.33:1438,96,0	1/1:2,30:32:87.29:1304,87,0	1/1:1,22:23:63.21:943,63,0	1/1:1,17:18:51.17:764,51,0	1/1:0,24:24:72.24:1079,72,0	1/1:0,15:15:45.15:674,45,0	1/1:0,26:26:78.25:1146,78,0	1/1:2,39:41:99:1484,99,0	1/1:2,10:12:33.11:491,33,0
chr10	49212481	.	C	CTATT	33505.72	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-11.900;DP=706;FS=7.943;HRun=0;HaplotypeScore=100.5184;InbreedingCoeff=0.9964;MQ=80.45;MQ0=0;MQRankSum=-7.259;QD=59.62;ReadPosRankSum=2.346;VQSLOD=6.4478;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,48:52:99:2952,126,0	1/1:1,12:13:27.06:668,27,0	0/0:19,0:19:44.30:0,44,666	0/0:24,0:24:35.91:0,36,716	1/1:6,23:29:71.98:1561,72,0	0/0:24,0:24:69.21:0,69,1246	0/0:22,0:22:66.16:0,66,1098	1/1:6,23:30:84.13:1817,84,0	0/0:21,0:21:60.16:0,60,1041	1/1:2,26:29:84.23:2147,84,0	1/1:4,20:25:60.04:1314,60,0	1/1:0,22:23:60.16:1537,60,0	1/1:1,25:26:72.25:1926,72,0	1/1:3,18:22:51.09:1240,51,0	1/1:3,25:30:63.13:1551,63,0	0/0:34,0:34:96.25:0,96,1659	1/1:2,30:35:66.23:1782,66,0	1/1:1,14:16:39.09:992,39,0	1/1:3,17:22:60.13:1310,60,0	1/1:3,25:29:78:1683,78,0	1/1:0,16:16:30.06:735,30,0	1/1:2,27:29:78.14:1907,78,0	1/1:3,20:23:54.11:1319,54,0	1/1:3,17:20:39.10:993,39,0	1/1:2,23:26:63.13:1563,63,0	1/1:3,30:34:96.32:2459,96,0	1/1:2,22:27:63.22:1647,63,0	1/1:2,3:5:15.05:405,15,0
chr10	49219977	.	T	TA	7170.33	PASS	AC=30;AF=0.556;AN=54;BaseQRankSum=-3.444;DP=387;FS=1.359;HRun=6;HaplotypeScore=60.6450;InbreedingCoeff=0.9551;MQ=69.15;MQ0=0;MQRankSum=-5.977;QD=30.77;ReadPosRankSum=-0.572;VQSLOD=5.1751;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:72.16:0,72,734	0/0:18,0:18:45.07:0,45,447	0/0:5,0:4:12.02:0,12,120	0/0:7,0:8:4.30:0,4,48	1/1:6,20:26:66.21:827,66,0	0/0:15,0:15:39.03:0,39,375	0/0:10,0:10:24.03:0,24,237	1/1:5,41:46:99:1475,108,0	0/0:11,0:11:24.05:0,24,245	1/1:2,13:15:42.13:519,42,0	1/1:1,8:9:27.07:327,27,0	1/1:5,5:10:18.05:214,18,0	1/1:3,8:11:27.09:338,27,0	1/1:2,7:9:24.06:288,24,0	0/0:12,0:12:27.03:0,27,262	0/0:10,0:10:30.05:0,30,299	1/1:4,24:28:69.22:866,69,0	1/1:5,7:12:30.04:335,30,0	0/0:24,0:24:60.13:0,60,611	0/0:5,0:5:15.03:0,15,153	./.	1/1:0,4:4:12.04:151,12,0	1/1:3,3:6:15.02:163,15,0	1/1:1,4:5:9.03:113,9,0	1/1:6,12:18:45.11:537,45,0	1/1:6,15:21:45.14:566,45,0	0/0:11,0:11:27.01:0,27,254	1/1:1,12:13:36.12:453,36,0
chr10	49220028	.	G	GAC	9408.86	PASS	AC=28;AF=0.519;AN=54;BaseQRankSum=15.018;DP=473;FS=12.303;HRun=0;HaplotypeScore=100.3993;InbreedingCoeff=0.9938;MQ=50.62;MQ0=8;MQRankSum=-12.414;QD=38.72;ReadPosRankSum=-1.746;VQSLOD=5.1453;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:69.23:0,69,966	0/0:14,0:14:39.13:0,39,546	0/0:27,0:7:18.31:0,18,208	0/0:23,0:5:14.73:0,15,154	1/1:2,26:28:45.15:806,45,0	0/0:21,0:21:57.19:0,57,798	0/0:15,0:15:45.13:0,45,612	1/1:14,17:28:60.05:944,60,0	0/0:10,0:10:27.07:0,27,358	1/1:2,12:14:39.13:693,39,0	1/1:1,15:15:33.11:590,33,0	1/1:1,14:15:39.13:690,39,0	1/1:1,11:12:33.11:589,33,0	1/1:2,12:14:33.11:591,33,0	0/0:18,0:18:54.18:0,54,756	0/0:16,0:16:45.12:0,45,596	1/1:5,14:18:48.15:818,48,0	1/1:2,9:12:30.08:507,30,0	0/0:13,0:12:33.11:0,33,462	0/0:15,0:15:42.14:0,42,587	0/0:18,0:18:54.17:0,54,739	1/1:2,15:17:39.13:698,39,0	1/1:2,12:14:33.10:561,33,0	./.	1/1:1,22:23:57.20:1022,57,0	1/1:4,12:16:36.12:630,36,0	0/0:16,0:16:48.15:0,48,655	1/1:3,9:12:15.05:270,15,0
chr10	49220362	.	T	TTCCCACA	4442.99	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=8.951;DP=677;FS=8.671;HRun=0;HaplotypeScore=152.8865;InbreedingCoeff=0.9907;MQ=82.31;MQ0=0;MQRankSum=-8.016;QD=96.59;ReadPosRankSum=1.518;VQSLOD=5.6581;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:63.22:0,63,1762	0/0:12,0:12:36.12:0,36,956	0/0:22,0:22:59.79:0,60,1574	0/0:18,0:18:48.14:0,48,1171	0/0:42,0:42:99:0,108,3005	0/0:29,0:29:87.30:0,87,2428	0/0:27,0:27:81.26:0,81,2205	0/0:38,0:38:99:0,114,3028	0/0:18,0:18:54.17:0,54,1442	0/0:25,0:25:75.26:0,75,2097	0/0:21,0:21:60.21:0,60,1654	0/0:25,0:25:75.26:0,75,2054	0/0:24,0:24:72.25:0,72,1987	0/0:31,0:31:93.31:0,93,2533	0/0:46,0:46:99:0,129,3507	0/0:29,0:29:87.30:0,87,2433	0/0:22,0:22:63.22:0,63,1701	0/0:15,0:15:45.15:0,45,1257	1/1:0,6:8:24.08:898,24,0	1/1:0,11:13:36.09:1357,36,0	1/1:0,4:5:12.04:487,12,0	0/0:34,0:34:90.27:0,90,2386	0/0:26,0:26:69.22:0,69,1870	0/0:17,0:17:51.18:0,51,1392	0/0:38,0:38:99:0,108,2932	0/0:30,0:30:90.31:0,90,2486	1/1:1,12:19:41.87:1701,42,0	0/0:21,0:21:57.20:0,57,1594
chr10	49221093	.	AAGG	A	2888.35	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=10.442;DP=721;FS=0.982;HRun=0;HaplotypeScore=102.2780;InbreedingCoeff=0.9996;MQ=73.09;MQ0=0;MQRankSum=-1.246;QD=29.18;ReadPosRankSum=-1.038;VQSLOD=3.2841;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,129,2702	0/0:9,0:9:27.09:0,27,585	0/0:26,0:25:63.21:0,63,1278	0/0:24,0:24:59.95:0,60,1227	0/0:33,0:33:90.18:0,90,1887	0/0:17,0:17:48.16:0,48,992	0/0:36,0:36:99:0,105,2184	0/0:34,0:34:87.30:0,87,1859	0/0:29,0:29:84.29:0,84,1819	0/0:26,0:26:72.25:0,72,1520	0/0:18,0:18:42.14:0,42,909	0/0:31,0:31:90.31:0,90,1926	0/0:29,0:29:84.29:0,84,1805	0/0:26,0:26:72.25:0,72,1535	0/0:34,0:34:96.31:0,96,2035	0/0:24,0:24:66.23:0,66,1409	0/0:29,0:29:78.25:0,78,1624	0/0:22,0:22:66.23:0,66,1414	1/1:4,14:18:36.09:511,36,0	1/1:5,20:25:57.11:838,57,0	1/1:3,29:32:57.12:855,57,0	0/0:21,0:21:54.19:0,54,1169	0/0:24,0:24:69.24:0,69,1478	0/0:14,0:14:42.14:0,42,909	0/0:29,0:29:72.25:0,72,1547	0/0:24,0:24:69.24:0,69,1483	1/1:0,24:24:54.18:845,54,0	0/0:15,0:15:36.12:0,36,778
chr10	49221632	.	A	AAAAAAG	18229.95	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=6.046;DP=637;FS=5.752;HRun=0;HaplotypeScore=145.4263;InbreedingCoeff=0.9872;MQ=69.57;MQ0=0;MQRankSum=-6.157;QD=39.46;ReadPosRankSum=1.939;VQSLOD=4.6476;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:87.23:0,87,1717	0/0:11,0:11:33.10:0,33,649	0/0:15,0:14:23.16:0,23,405	0/0:13,0:13:29.57:0,30,449	1/1:6,0:52:87.64:1613,88,0	0/0:20,0:20:60.17:0,60,1139	0/0:14,0:14:42.12:0,42,760	1/1:8,0:31:61.86:1126,62,0	0/0:18,0:18:48.10:0,48,797	1/1:3,0:31:53.64:1120,54,0	1/1:2,0:38:99:1527,102,0	1/1:2,0:20:27.22:661,27,0	1/1:2,0:25:45.33:937,45,0	1/1:1,0:13:30.10:437,30,0	0/0:26,0:26:75.22:0,75,1439	0/0:28,0:28:78.22:0,78,1487	1/1:2,0:19:41.81:551,42,0	1/1:1,0:17:33.11:482,33,0	1/1:4,13:19:54.16:1353,54,0	1/1:1,21:29:68.98:1705,69,0	1/1:1,4:5:8.99:219,9,0	1/1:2,0:23:26.50:773,26,0	1/1:2,0:22:38.55:703,39,0	1/1:1,0:15:26.51:472,27,0	1/1:2,0:24:54.18:787,54,0	1/1:0,0:36:99:1573,108,0	1/1:5,23:33:63.22:1971,63,0	1/1:1,0:8:15.05:218,15,0
chr10	49223014	.	CTT	C	15564.26	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=19.057;DP=822;FS=0.831;HRun=3;HaplotypeScore=96.6800;InbreedingCoeff=0.9987;MQ=83.86;MQ0=3;MQRankSum=-3.840;QD=38.24;ReadPosRankSum=4.415;VQSLOD=4.6075;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,160,3005	0/0:9,0:9:27.09:0,27,521	0/0:24,0:24:72.19:0,72,1243	0/0:25,0:24:61.53:0,62,1139	1/1:1,22:23:66.22:1010,66,0	0/0:23,0:23:69.24:0,69,1325	0/0:38,0:38:99:0,111,2105	1/1:1,29:30:87.23:1219,87,0	0/0:28,0:28:81.24:0,81,1434	1/1:0,27:27:72.22:1061,72,0	1/1:0,15:15:42.14:643,42,0	1/1:1,41:42:99:1515,99,0	1/1:2,42:43:99:1529,102,0	1/1:1,41:41:99:1561,102,0	0/0:32,0:32:93.28:0,93,1729	0/0:34,0:34:99:0,99,1754	1/1:1,36:37:90.06:1377,90,0	1/1:1,28:29:78.26:1194,78,0	0/0:27,0:27:81.24:0,81,1468	0/0:21,0:21:57.17:0,57,1006	0/0:76,0:76:99:0,226,4159	1/1:0,22:22:51.17:780,51,0	1/1:1,15:16:45.15:689,45,0	1/1:0,33:32:81.28:1240,81,0	1/1:0,20:20:51.17:780,51,0	1/1:0,18:18:48.13:692,48,0	0/0:24,0:24:72.23:0,72,1320	1/1:0,9:9:18.06:275,18,0
chr10	49223580	.	TG	T	17989.82	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=16.163;DP=742;FS=17.739;HRun=2;HaplotypeScore=82.6113;InbreedingCoeff=0.9984;MQ=85.61;MQ0=0;MQRankSum=-3.414;QD=36.20;ReadPosRankSum=3.262;VQSLOD=3.2759;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,126,1885	0/0:8,0:8:24.08:0,24,359	0/0:25,0:25:75.19:0,75,1064	0/0:24,0:24:66.20:0,66,924	1/1:2,18:20:51.17:662,51,0	0/0:23,0:23:66.22:0,66,989	0/0:29,0:29:87.29:0,87,1299	1/1:1,31:32:90.29:1169,90,0	0/0:21,0:21:63.17:0,63,919	1/1:2,21:23:63.20:816,63,0	1/1:1,12:13:36.12:467,36,0	1/1:1,37:38:99:1286,99,0	1/1:0,31:31:84.27:1091,84,0	1/1:0,35:35:99:1285,99,0	0/0:38,0:38:99:0,111,1661	0/0:32,0:32:96.33:0,96,1438	1/1:1,21:22:57.19:740,57,0	1/1:0,35:35:99:1361,105,0	1/1:0,23:23:69.22:894,69,0	1/1:0,18:18:54.18:701,54,0	1/1:0,46:46:99:1675,129,0	1/1:0,29:29:72.23:935,72,0	1/1:0,19:19:57.19:740,57,0	1/1:0,32:32:87.28:1130,87,0	1/1:1,19:20:54.18:701,54,0	1/1:0,35:35:99:1364,105,0	1/1:0,20:20:57.19:740,57,0	1/1:0,6:6:18.06:234,18,0
chr10	49224569	.	AC	A	12427.05	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=15.427;DP=649;FS=0.288;HRun=1;HaplotypeScore=60.8818;InbreedingCoeff=0.9998;MQ=87.08;MQ0=0;MQRankSum=-4.249;QD=38.47;ReadPosRankSum=0.756;VQSLOD=5.2474;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,117,1794	0/0:9,0:9:27.08:0,27,408	0/0:31,0:31:93.32:0,93,1474	0/0:22,0:22:62.86:0,63,909	1/1:0,30:30:87.22:1192,87,0	0/0:20,0:20:60.15:0,60,886	0/0:19,0:19:57.19:0,57,911	1/1:0,34:34:99:1340,102,0	0/0:19,0:19:57.18:0,57,886	1/1:0,28:28:81.24:1093,81,0	1/1:0,13:13:39.04:501,39,0	1/1:0,22:22:48.16:671,48,0	1/1:0,21:21:57.19:797,57,0	1/1:0,17:17:48.16:671,48,0	0/0:25,0:25:75.24:0,75,1175	0/0:20,0:19:60.19:0,60,932	1/1:0,23:23:63.21:881,63,0	1/1:0,14:14:39.09:523,39,0	0/0:22,0:22:66.21:0,66,1030	0/0:27,0:27:81.28:0,81,1286	0/0:21,0:21:63.21:0,63,1003	1/1:0,24:24:69.23:964,69,0	1/1:0,19:19:48.13:650,48,0	1/1:0,21:21:60.20:839,60,0	1/1:0,21:21:57.19:797,57,0	1/1:0,23:23:69.23:964,69,0	0/0:51,0:51:99:0,154,2419	1/1:0,13:13:39.13:545,39,0
chr10	49225460	.	CT	C	2501.87	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-5.216;DP=711;FS=0.000;HRun=13;HaplotypeScore=105.0309;InbreedingCoeff=0.8768;MQ=68.19;MQ0=0;MQRankSum=0.188;QD=12.15;ReadPosRankSum=2.789;VQSLOD=3.4280;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:47:76.86:0,77,401	0/0:1,0:6:9.77:0,10,46	0/0:12,0:10:12.85:0,13,96	0/0:11,0:10:8.21:0,8,94	0/0:36,0:37:59.03:0,59,704	1/1:3,20:24:55.70:400,56,0	1/1:7,22:29:10.29:401,10,0	0/0:31,2:33:16:0,16,473	1/1:7,25:32:15.89:407,16,0	0/0:30,3:34:0.59:0,1,444	0/0:25,2:28:13.10:0,13,433	0/0:33,2:35:46.24:0,46,737	0/0:22,2:25:25.32:0,25,424	0/0:26,2:29:22.42:0,22,453	0/0:10,0:25:40.29:0,40,269	1/1:7,23:30:47.68:350,48,0	0/0:24,3:27:0.36:0,0,483	0/0:20,1:23:24.13:0,24,377	1/1:6,8:16:27.91:187,28,0	1/1:3,19:22:44.62:328,45,0	1/1:9,14:25:40.75:290,41,0	0/0:21,1:23:30.36:0,30,433	0/0:22,1:25:49.86:0,50,614	0/0:23,1:24:43.37:0,43,552	0/0:22,2:25:13.14:0,13,427	0/0:23,1:25:26:0,26,401	1/1:8,17:28:27.57:338,28,0	0/0:11,0:11:30.93:0,31,293
chr10	49226683	.	C	CG	1554.76	PASS	AB=0.692;AC=13;AF=0.232;AN=56;BaseQRankSum=5.153;DP=666;FS=1.524;HRun=9;HaplotypeScore=93.7501;InbreedingCoeff=0.8759;MQ=83.98;MQ0=0;MQRankSum=-5.903;QD=10.51;ReadPosRankSum=-2.990;VQSLOD=2.3828;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,22:33:30.92:543,31,0	0/1:5,4:9:11.14:99,0,11	0/0:25,0:25:53.63:0,54,449	0/0:16,0:16:25.25:0,25,188	0/0:23,0:23:44.95:0,45,387	0/0:24,2:26:35.78:0,36,535	0/0:18,0:19:30.37:0,30,388	0/0:35,1:36:44.88:0,45,388	0/0:21,0:21:44.94:0,45,386	0/0:24,0:25:47.92:0,48,409	0/0:22,0:22:50.86:0,51,442	0/0:26,0:26:59.96:0,60,521	0/0:31,0:31:65.88:0,66,564	0/0:33,0:33:71.94:0,72,625	1/1:13,28:41:54.14:590,54,0	0/0:27,0:27:74.96:0,75,647	0/0:37,0:37:95.95:0,96,833	0/0:18,0:18:44.97:0,45,386	1/1:8,1:15:28.82:164,29,0	1/1:8,0:13:9.59:51,10,0	1/1:6,2:23:37.24:222,37,0	0/0:16,0:16:29.98:0,30,260	0/0:21,0:21:35.98:0,36,312	0/0:36,0:36:98.92:0,99,852	0/0:23,1:24:11.77:0,12,331	0/0:30,0:32:51.99:0,52,428	1/1:7,0:13:14.24:71,14,0	0/0:4,0:4:8.99:0,9,78
chr10	49228824	.	ACACTTG	A	11096.02	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=16.823;DP=781;FS=2.749;HRun=0;HaplotypeScore=169.1466;InbreedingCoeff=0.9991;MQ=86.73;MQ0=0;MQRankSum=-18.188;QD=56.61;ReadPosRankSum=1.720;VQSLOD=4.6649;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,144,5111	0/0:10,0:10:27.09:0,27,989	0/0:28,0:28:78.11:0,78,2331	0/0:31,0:31:80.85:0,81,2466	0/0:38,0:38:99:0,114,3910	1/1:2,16:18:51.17:1252,51,0	1/1:2,27:29:72.24:1662,72,0	0/0:44,0:44:99:0,126,4235	1/1:1,23:24:60.21:1440,60,0	0/0:26,0:26:78.27:0,78,2779	0/0:26,0:26:78.24:0,78,2649	0/0:28,0:28:81.28:0,81,2909	0/0:24,0:24:69.22:0,69,2380	0/0:35,0:35:99:0,105,3721	0/0:35,0:35:99:0,102,3676	1/1:0,40:40:99:2474,102,0	0/0:31,0:31:93.32:0,93,3186	0/0:27,0:27:78.22:0,78,2690	1/1:5,23:28:66.18:1454,66,0	1/1:1,20:21:51.05:1059,51,0	1/1:2,13:15:21.03:426,21,0	0/0:29,0:29:87.28:0,87,2966	0/0:25,0:25:75.26:0,75,2678	0/0:18,0:18:54.19:0,54,1978	0/0:30,0:30:90.31:0,90,3113	0/0:35,0:35:99:0,102,3709	1/1:0,21:21:54.19:1329,54,0	0/0:15,0:15:45.15:0,45,1353
chr10	49229681	.	TCAGAAACATACC	T	4855.94	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=10.834;DP=716;FS=0.580;HRun=0;HaplotypeScore=256.6020;InbreedingCoeff=0.9968;MQ=79.66;MQ0=0;MQRankSum=-9.227;QD=66.52;ReadPosRankSum=2.204;VQSLOD=4.3081;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,147,8597	0/0:14,0:14:42.14:0,42,2310	0/0:23,0:23:66.20:0,66,3276	0/0:14,0:14:36.11:0,36,1940	0/0:24,0:24:72.25:0,72,4364	0/0:22,0:22:60.18:0,60,3529	0/0:24,0:24:63.19:0,63,3333	0/0:35,0:35:99:0,102,5674	0/0:21,0:21:60.21:0,60,3424	0/0:28,0:28:81.28:0,81,5028	0/0:14,0:14:42.13:0,42,2322	0/0:29,0:29:87.30:0,87,5016	0/0:35,0:35:99:0,105,5954	0/0:28,0:28:81.28:0,81,4915	0/0:30,0:30:90.31:0,90,5317	0/0:35,0:35:99:0,105,6328	0/0:42,0:42:99:0,126,7152	0/0:30,0:30:87.30:0,87,5099	1/1:8,8:16:24.07:643,24,0	1/1:3,15:18:42.14:1595,42,0	1/1:4,13:17:17.43:680,17,0	0/0:23,0:23:63.22:0,63,3789	0/0:21,0:21:54.19:0,54,3245	0/0:25,0:25:75.26:0,75,4515	0/0:32,0:32:96.33:0,96,5825	0/0:28,0:28:78.24:0,78,4120	1/1:2,20:22:51.18:1938,51,0	0/0:17,0:17:51.18:0,51,3164
chr10	49230294	.	A	ACC	1846.25	PASS	AB=0.586;AC=5;AF=0.089;AN=56;BaseQRankSum=12.084;DP=667;FS=0.000;HRun=1;HaplotypeScore=134.2128;InbreedingCoeff=0.4157;MQ=78.06;MQ0=0;MQRankSum=-11.161;QD=22.24;ReadPosRankSum=0.226;VQSLOD=1.4952;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,111,1810	0/0:8,0:8:24.08:0,24,391	0/0:18,0:18:54.17:0,54,828	0/0:20,0:20:54.18:0,54,826	0/0:18,0:18:54.18:0,54,881	0/0:22,0:22:63.11:0,63,632	0/0:28,0:28:84.02:0,84,768	0/0:28,0:28:84.28:0,84,1348	0/0:28,0:28:81.06:0,81,780	0/0:30,0:30:90.29:0,90,1442	0/0:18,0:18:51.17:0,51,829	0/0:34,0:34:99:0,99,1542	0/0:31,0:31:93.30:0,93,1487	0/0:27,0:27:81.25:0,81,1273	0/0:36,0:36:99:0,105,1710	0/0:33,0:33:90:0,90,866	0/0:36,0:36:99:0,108,1729	0/0:18,0:18:51.14:0,51,804	0/1:4,9:13:85.06:289,0,85	1/1:3,17:20:47.16:575,47,0	0/1:7,12:19:5.23:297,0,5	0/0:15,0:15:45.13:0,45,708	0/0:17,0:17:51.17:0,51,827	0/0:22,0:22:66.23:0,66,1071	0/0:25,0:25:75.23:0,75,1197	0/0:25,0:25:75.25:0,75,1201	0/1:6,25:31:30.91:810,0,31	0/0:10,0:10:30.04:0,30,392
chr10	49230295	.	T	TGCAC	3139.76	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=9.482;DP=664;FS=2.826;HRun=0;HaplotypeScore=156.2709;InbreedingCoeff=0.9953;MQ=76.33;MQ0=0;MQRankSum=-10.507;QD=36.94;ReadPosRankSum=-1.531;VQSLOD=3.7099;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,111,2118	0/0:8,0:8:24.08:0,24,467	0/0:16,0:16:48.15:0,48,895	0/0:19,0:19:47.16:0,47,798	0/0:19,0:19:54.19:0,54,1069	0/0:22,0:22:39.20:0,39,725	0/0:28,0:28:65.21:0,65,876	0/0:29,0:29:84.26:0,84,1571	0/0:28,0:28:61.14:0,61,878	0/0:30,0:30:87.27:0,87,1662	0/0:19,0:19:51.15:0,51,946	0/0:31,0:31:90.31:0,90,1773	0/0:32,0:32:90.28:0,90,1716	0/0:26,0:26:78.24:0,78,1476	0/0:36,0:36:99:0,102,2034	0/0:34,0:34:32.20:0,32,903	0/0:36,0:36:99:0,105,1982	0/0:18,0:18:54.13:0,54,1002	1/1:4,9:13:19.55:520,20,0	1/1:7,13:21:45.15:834,45,0	1/1:7,12:19:29.56:535,30,0	0/0:15,0:15:42.14:0,42,825	0/0:18,0:18:48.16:0,48,939	0/0:22,0:22:66.21:0,66,1280	0/0:25,0:25:75.24:0,75,1455	0/0:24,0:24:72.25:0,72,1424	1/1:8,24:32:75.35:1410,75,0	0/0:7,0:7:18.06:0,18,359
chr10	49230418	.	C	CA	3888.49	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=10.103;DP=599;FS=0.417;HRun=1;HaplotypeScore=75.9565;InbreedingCoeff=0.9991;MQ=86.05;MQ0=2;MQRankSum=-2.953;QD=42.27;ReadPosRankSum=0.152;VQSLOD=3.7811;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:66.19:0,66,841	0/0:15,0:15:45.15:0,45,583	0/0:20,0:20:59.52:0,60,699	0/0:20,0:20:31.74:0,32,598	0/0:32,0:32:87.27:0,87,1114	1/1:1,25:26:78.16:1096,78,0	1/1:1,16:17:48.16:719,48,0	0/0:27,0:27:81.24:0,81,1016	1/1:3,20:23:66.22:980,66,0	0/0:30,0:30:90.27:0,90,1143	0/0:30,0:30:84.25:0,84,1063	0/0:20,0:20:54.18:0,54,701	0/0:12,0:12:36.12:0,36,467	0/0:24,0:24:63.17:0,63,788	0/0:17,0:17:42.14:0,42,545	1/1:4,22:26:75.19:1093,75,0	0/0:13,0:13:33.11:0,33,428	0/0:11,0:11:33.11:0,33,428	0/0:21,0:21:57.18:0,57,739	0/0:31,0:31:93.30:0,93,1206	0/0:8,0:8:24.06:0,24,297	0/0:25,0:25:72.23:0,72,934	0/0:16,0:16:45.09:0,45,584	0/0:17,0:17:48.14:0,48,609	0/0:21,0:21:60.15:0,60,779	0/0:29,0:29:84.26:0,84,1078	0/0:25,0:24:75.23:0,75,958	0/0:19,0:17:48.13:0,48,606
chr10	49232324	.	AG	A	954.01	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.923;DP=685;FS=0.762;HRun=1;HaplotypeScore=90.2867;InbreedingCoeff=0.9993;MQ=76.40;MQ0=0;MQRankSum=-3.341;QD=36.69;ReadPosRankSum=1.334;VQSLOD=3.9383;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:78.27:0,78,1242	0/0:12,0:12:36.12:0,36,572	0/0:15,0:15:42.10:0,42,589	0/0:12,0:12:31.46:0,31,381	0/0:29,0:29:87.28:0,87,1366	0/0:27,0:27:81.28:0,81,1295	0/0:15,0:15:45.14:0,45,696	0/0:32,0:32:90.31:0,90,1431	0/0:24,0:24:72.25:0,72,1151	0/0:30,0:30:87.28:0,87,1351	0/0:20,0:20:54.17:0,54,837	0/0:31,0:31:93.30:0,93,1460	0/0:38,0:38:99:0,111,1690	0/0:28,0:28:84.29:0,84,1342	0/0:40,0:40:99:0,120,1893	1/1:0,26:26:75.25:1049,75,0	0/0:15,0:15:45.15:0,45,716	0/0:23,0:23:66.22:0,66,1055	0/0:12,0:12:36.12:0,36,574	0/0:20,0:20:60.18:0,60,912	0/0:27,0:27:81.28:0,81,1292	0/0:27,0:27:78.24:0,78,1201	0/0:25,0:25:75.26:0,75,1197	0/0:31,0:31:93.29:0,93,1435	0/0:22,0:22:66.23:0,66,1055	0/0:32,0:32:96.32:0,96,1508	0/0:30,0:30:90.24:0,90,1396	0/0:14,0:14:42.14:0,42,671
chr10	49232747	.	GC	G	1748.60	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.877;DP=963;FS=0.565;HRun=1;HaplotypeScore=114.8952;InbreedingCoeff=0.9990;MQ=89.63;MQ0=0;MQRankSum=-2.323;QD=38.01;ReadPosRankSum=0.364;VQSLOD=3.3635;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:62,0:62:99:0,187,2969	0/0:15,0:15:45.15:0,45,715	0/0:34,0:34:99:0,102,1585	0/0:38,0:38:99:0,102,1598	0/0:38,0:38:99:0,114,1793	0/0:16,0:16:48.16:0,48,767	0/0:29,0:29:87.30:0,87,1389	0/0:40,0:40:99:0,120,1870	0/0:30,0:30:90.31:0,90,1439	0/0:45,0:45:99:0,132,2107	0/0:18,0:18:51.17:0,51,813	0/0:48,0:48:99:0,144,2297	0/0:42,0:42:99:0,123,1941	0/0:46,0:46:99:0,138,2182	0/0:36,0:36:99:0,108,1681	1/1:0,46:46:99:1843,132,0	0/0:23,0:23:69.24:0,69,1103	0/0:29,0:29:84.29:0,84,1343	0/0:24,0:24:72.24:0,72,1130	0/0:28,0:28:84.29:0,84,1343	0/0:60,0:60:99:0,178,2767	0/0:30,0:30:90.31:0,90,1436	0/0:21,0:21:63.20:0,63,983	0/0:55,0:55:99:0,166,2615	0/0:34,0:34:99:0,102,1625	0/0:34,0:34:99:0,99,1534	0/0:33,0:33:96.31:0,96,1508	0/0:9,0:9:27.09:0,27,432
chr10	49232906	.	TGTTACGGGTCACC	T	9406.77	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=14.319;DP=856;FS=1.939;HRun=0;HaplotypeScore=320.8358;InbreedingCoeff=0.9602;MQ=84.52;MQ0=0;MQRankSum=-14.810;QD=80.40;ReadPosRankSum=0.070;VQSLOD=4.1793;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,141,8830	0/0:10,0:10:30.10:0,30,1902	0/0:33,0:33:96.28:0,96,4182	0/0:25,0:25:60.64:0,61,2967	0/0:24,0:24:69.21:0,69,3915	0/0:20,0:20:60.18:0,60,3482	0/0:31,0:31:90.31:0,90,5788	0/0:37,0:37:99:0,108,6168	0/0:36,0:36:99:0,105,6558	0/0:39,0:39:99:0,114,6537	0/0:25,0:25:75.24:0,75,4551	0/0:47,0:47:99:0,138,8763	0/0:47,0:47:99:0,141,8520	0/0:43,0:43:99:0,126,7673	0/0:46,0:46:99:0,129,7924	1/1:4,28:32:78.27:3122,78,0	0/0:44,0:44:99:0,123,7774	0/0:29,0:29:87.26:0,87,5222	1/1:5,10:15:30.10:1150,30,0	1/1:1,19:20:51.18:1954,51,0	1/1:12,17:29:39.60:1396,40,0	0/0:20,0:20:60.21:0,60,3812	0/0:25,0:25:72.23:0,72,4487	0/0:36,0:36:99:0,105,6830	0/0:35,0:35:99:0,99,6299	0/0:37,0:37:99:0,108,6790	1/1:4,17:21:44.99:1786,45,0	0/0:2,0:2:3.01:0,3,199
chr10	49234057	.	TATGAACATGTATAC	T	1056.80	PASS	AB=0.989;AC=17;AF=0.447;AN=38;BaseQRankSum=5.079;DP=114;FS=14.560;HRun=0;HaplotypeScore=56.8405;InbreedingCoeff=0.1921;MQ=90.75;MQ0=3;MQRankSum=-2.826;QD=11.24;ReadPosRankSum=0.504;VQSLOD=0.2549;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:4:3.62:19,4,0	./.	0/1:18,0:5:10.84:54,0,11	0/1:27,0:13:2.12:2,0,25	1/1:4,0:4:6.02:135,6,0	0/0:2,0:2:6.02:0,6,265	0/0:3,0:3:9.03:0,9,326	0/1:17,1:18:99:261,0,1177	0/0:1,0:1:3.01:0,3,211	./.	0/0:2,0:2:0.26:0,0,1	1/1:1,0:1:2.68:11,3,0	./.	1/1:1,0:1:3.01:58,3,0	0/0:3,0:3:9.03:0,9,270	0/0:1,0:1:0:0,0,0	0/1:6,0:6:59.35:59,0,255	0/0:6,0:6:18.05:0,18,574	./.	./.	./.	./.	./.	./.	1/1:5,0:5:11.83:280,12,0	0/1:3,0:3:21.02:105,0,21	0/0:1,0:1:3.01:0,3,69	1/1:3,4:7:9.03:198,9,0
chr10	49234059	.	TGAACATGTATAC	T	1517.72	PASS	AB=0.893;AC=16;AF=0.421;AN=38;BaseQRankSum=3.970;DP=108;FS=11.962;HRun=0;HaplotypeScore=54.2965;InbreedingCoeff=0.1800;MQ=93.51;MQ0=2;MQRankSum=-2.476;QD=17.45;ReadPosRankSum=0.781;VQSLOD=-0.3273;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:4,0:4:2.43:4,0,2	./.	0/1:15,0:5:13.75:52,0,14	0/1:22,0:13:3.50:4,0,28	1/1:0,4:4:6.02:229,6,0	0/0:2,0:2:6.02:0,6,278	0/0:3,0:3:9.03:0,9,404	0/1:16,2:18:99:313,0,1152	0/0:3,0:3:9.03:0,9,431	./.	0/0:0,2:2:0.26:0,0,1	1/1:1,0:1:3.01:32,3,0	./.	1/1:1,0:1:3.01:93,3,0	0/0:3,0:3:9.03:0,9,272	0/0:1,0:1:0:0,0,0	0/1:5,1:6:99:106,0,239	0/0:6,0:6:18.05:0,18,588	./.	./.	./.	./.	./.	./.	1/1:1,4:5:11.83:468,12,0	0/1:1,2:3:33.06:128,0,33	0/0:0,0:1:3.01:0,3,47	1/1:4,1:7:9.03:216,9,0
chr10	49234071	.	C	CATAT	1002.66	PASS	AB=0.967;AC=30;AF=0.714;AN=42;BaseQRankSum=1.561;DP=114;FS=7.419;HRun=0;HaplotypeScore=41.8280;InbreedingCoeff=0.3852;MQ=89.11;MQ0=1;MQRankSum=-1.767;QD=11.80;ReadPosRankSum=0.982;VQSLOD=1.2218;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,7:9:12.04:297,12,0	./.	0/1:13,0:6:35.15:35,0,41	0/0:19,0:12:5.93:0,6,45	1/1:4,0:4:5.88:36,6,0	0/0:2,0:2:3.01:0,3,51	0/0:4,0:4:12.02:0,12,176	1/1:21,0:21:16.18:294,16,0	0/0:3,0:3:9.03:0,9,152	./.	1/1:2,0:2:0.47:1,0,0	1/1:1,0:1:1.55:4,2,0	1/1:1,0:1:3:26,3,0	1/1:0,0:1:3.01:53,3,0	1/1:0,3:3:6.02:149,6,0	0/1:2,0:2:0:0,0,0	1/1:4,0:4:3.01:36,3,0	1/1:7,0:7:5.95:43,6,0	./.	./.	1/1:1,0:1:2.99:24,3,0	./.	./.	./.	1/1:5,0:5:11.82:74,12,0	1/1:3,0:3:2.43:17,2,0	0/0:1,0:1:0.89:0,1,2	1/1:7,0:7:1.37:38,1,0
chr10	49234541	.	C	CA	5127.22	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=11.648;DP=806;FS=1.144;HRun=2;HaplotypeScore=110.4415;InbreedingCoeff=1.0000;MQ=86.51;MQ0=0;MQRankSum=-6.363;QD=37.15;ReadPosRankSum=-0.235;VQSLOD=4.4218;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:58:99:0,169,2069	0/0:13,0:13:39.12:0,39,483	0/0:26,0:26:61.82:0,62,809	0/0:31,0:31:86.22:0,86,1017	0/0:22,0:22:66.19:0,66,805	0/0:27,0:27:75.23:0,75,918	0/0:26,0:26:72.23:0,72,893	0/0:29,0:29:81.25:0,81,1004	0/0:31,0:31:93.28:0,93,1140	0/0:27,0:27:75.16:0,75,871	0/0:14,0:14:42.12:0,42,507	0/0:42,0:42:99:0,123,1509	0/0:47,0:47:99:0,138,1694	0/0:41,0:41:99:0,123,1498	0/0:46,0:46:99:0,138,1696	1/1:4,24:28:72.23:1019,72,0	0/0:24,0:24:69.22:0,69,855	0/0:19,0:18:57.07:0,57,684	1/1:4,17:21:54.16:734,54,0	1/1:1,30:31:84.11:1115,84,0	1/1:2,27:29:72.20:1012,72,0	0/0:23,0:23:66.16:0,66,769	0/0:16,0:16:48.15:0,48,595	0/0:26,0:26:69.20:0,69,841	0/0:33,0:33:99:0,99,1198	0/0:31,0:31:90.26:0,90,1092	1/1:4,25:28:87.29:1247,87,0	0/0:16,0:16:48.15:0,48,595
chr10	49234586	.	CTCTACCATGAAAGAGGAACAAACGGTCTTCCCT	C	9366.72	PASS	AC=8;AF=0.148;AN=54;BaseQRankSum=10.549;DP=794;FS=0.600;HRun=0;HaplotypeScore=631.6047;InbreedingCoeff=0.9828;MQ=85.35;MQ0=0;MQRankSum=-8.701;QD=108.92;ReadPosRankSum=4.273;VQSLOD=1.3929;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:56:99:0,169,21256	0/0:12,0:12:36.12:0,36,4256	0/0:32,0:32:34.85:0,35,5909	0/0:39,0:39:87.22:0,87,6134	0/0:32,0:32:96.30:0,96,11456	0/0:25,0:25:63.22:0,63,8528	0/0:27,0:27:78.27:0,78,9523	0/0:38,0:38:99:0,105,9178	0/0:33,0:33:99:0,99,12664	0/0:32,0:32:90.31:0,90,11304	0/0:20,0:20:60.21:0,60,7390	0/0:33,0:33:93.32:0,93,10965	0/0:46,0:46:99:0,132,15123	0/0:37,0:37:99:0,108,14309	0/0:51,0:51:99:0,154,19497	1/1:11,22:33:39.13:3343,39,0	0/0:23,0:23:63.22:0,63,7788	0/0:24,0:23:72.25:0,72,8886	1/1:6,3:9:9.03:782,9,0	1/1:12,7:19:24.07:1851,24,0	./.	0/0:20,0:20:60.21:0,60,8210	0/0:17,0:17:48.15:0,48,6269	0/0:26,0:26:72.25:0,72,8905	0/0:23,0:23:63.22:0,63,9203	0/0:31,0:31:90.31:0,90,11951	1/1:6,19:25:39.13:3390,39,0	0/0:18,0:18:51.18:0,51,6805
chr10	49234616	.	CCCT	C	1424.95	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=11.007;DP=727;FS=6.100;HRun=0;HaplotypeScore=144.7323;InbreedingCoeff=0.9958;MQ=87.87;MQ0=0;MQRankSum=-10.648;QD=20.65;ReadPosRankSum=3.523;VQSLOD=3.0523;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,148,3518	0/0:10,0:10:30.10:0,30,740	0/0:28,0:28:84.23:0,84,1855	0/0:31,0:31:80.19:0,80,1959	0/0:30,0:30:90.30:0,90,2127	0/0:23,0:23:69.24:0,69,1673	0/0:33,0:33:99:0,99,2254	0/0:28,0:28:84.29:0,84,1969	0/0:34,0:34:99:0,102,2421	0/0:36,0:36:99:0,105,2563	0/0:18,0:18:54.08:0,54,1258	0/0:27,0:27:81.26:0,81,1858	0/0:44,0:44:99:0,132,3063	0/0:37,0:37:99:0,111,2677	0/0:45,0:45:99:0,135,3126	1/1:22,0:22:38.97:333,39,0	0/0:27,0:27:81.27:0,81,1939	0/0:18,0:17:54.19:0,54,1307	1/1:3,2:5:15.01:184,15,0	1/1:8,3:11:30.02:321,30,0	1/1:1,11:12:27.09:433,27,0	0/0:21,0:21:63.20:0,63,1495	0/0:18,0:18:54.19:0,54,1328	0/0:27,0:27:78.26:0,78,1846	0/0:25,0:25:75.26:0,75,1833	0/0:33,0:33:99:0,99,2405	1/1:19,0:19:38.96:328,39,0	0/0:16,0:16:45.15:0,45,1079
chr10	49236645	.	C	CT	2392.35	PASS	AB=0.702;AC=30;AF=0.536;AN=56;BaseQRankSum=-3.044;DP=544;FS=13.565;HRun=14;HaplotypeScore=92.3678;InbreedingCoeff=0.4628;MQ=65.33;MQ0=3;MQRankSum=-0.840;QD=6.55;ReadPosRankSum=0.495;VQSLOD=1.0630;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:41,0:41:84.39:347,84,0	1/1:7,0:7:16.07:66,16,0	0/0:18,0:8:2.44:0,2,9	0/0:13,1:8:2:0,2,6	0/1:14,18:34:21.61:159,0,22	0/0:16,2:20:7.22:0,7,157	0/0:17,0:17:23.46:0,23,154	1/1:12,8:20:1.73:135,2,0	0/0:10,0:10:17.63:0,18,114	1/1:10,10:21:15.53:166,16,0	1/1:2,11:16:6.41:126,6,0	0/1:6,6:12:23.54:64,0,24	0/1:9,12:22:14.09:41,0,14	1/1:2,12:16:5.12:65,5,0	1/1:15,0:14:26.78:109,27,0	0/0:14,4:20:13.13:0,13,195	1/1:8,19:28:26.22:258,26,0	1/1:10,14:27:12.96:194,13,0	0/0:8,0:24:34.57:0,35,110	0/0:9,0:21:32.33:0,32,109	0/0:3,0:10:12.18:0,12,35	0/1:21,4:25:34.70:120,0,35	0/1:14,3:17:2.95:92,0,3	0/1:2,10:12:10.07:44,0,10	1/1:8,10:18:22.13:188,22,0	1/1:13,12:28:19.30:266,19,0	0/0:7,0:25:28.32:0,28,82	1/1:1,4:6:17.84:146,18,0
chr10	49236649	.	T	TTC	2069.82	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-8.567;DP=531;FS=29.579;HRun=0;HaplotypeScore=97.1540;InbreedingCoeff=0.8292;MQ=61.44;MQ0=4;MQRankSum=0.401;QD=32.85;ReadPosRankSum=5.863;VQSLOD=2.7237;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,37:41:96.30:1449,96,0	1/1:0,7:7:18.05:287,18,0	0/0:16,0:5:3.96:0,4,47	0/0:12,0:7:2.19:0,2,44	0/0:34,0:34:66:0,66,536	0/0:22,0:22:56.85:0,57,641	0/0:14,0:14:42.09:0,42,509	0/0:17,0:17:34.16:0,34,236	0/0:10,0:10:27.07:0,27,351	0/0:22,0:22:57.11:0,57,402	0/0:15,0:15:39.30:0,39,279	0/0:11,0:11:26.58:0,27,230	0/0:22,0:22:33.24:0,33,291	0/0:16,0:16:12.51:0,13,86	1/1:1,14:14:30.10:475,30,0	0/0:20,0:20:50.97:0,51,644	0/0:26,0:26:46.67:0,47,306	0/0:25,0:25:52.91:0,53,385	0/0:24,0:24:72.08:0,72,696	0/0:23,0:23:66.02:0,66,634	0/0:9,0:9:27:0,27,251	0/0:22,0:22:55.65:0,56,468	0/0:18,0:18:46.38:0,46,347	0/0:12,0:12:11.72:0,12,101	0/0:17,0:17:40.75:0,41,268	0/0:29,0:29:48.06:0,48,482	0/0:25,0:25:59.94:0,60,570	0/0:6,0:6:4.90:0,5,69
chr10	49236977	.	C	CT	4649.16	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-13.428;DP=827;FS=9.824;HRun=0;HaplotypeScore=75.3486;InbreedingCoeff=0.9964;MQ=86.96;MQ0=1;MQRankSum=-1.095;QD=43.05;ReadPosRankSum=3.665;VQSLOD=5.0506;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,60:60:99:2589,163,0	1/1:1,8:8:24.08:384,24,0	0/0:23,0:23:69.20:0,69,932	0/0:34,0:34:82.79:0,83,1219	0/0:32,0:32:87.27:0,87,1189	0/0:25,0:25:75.25:0,75,1038	0/0:31,0:31:93.31:0,93,1301	0/0:22,0:22:63.20:0,63,866	0/0:25,0:25:72.21:0,72,971	0/0:30,0:30:87.28:0,87,1202	0/0:26,0:26:69.22:0,69,948	0/0:43,0:43:99:0,126,1702	0/0:39,0:39:99:0,117,1598	0/0:35,0:35:99:0,102,1405	1/1:1,38:39:99:1676,105,0	0/0:37,0:36:99:0,111,1546	0/0:38,0:37:99:0,114,1568	0/0:13,0:13:39.11:0,39,527	0/0:16,0:16:46.95:0,47,603	0/0:27,0:27:81.27:0,81,1131	0/0:39,0:39:99:0,111,1516	0/0:30,0:30:90.29:0,90,1241	0/0:23,0:23:60.17:0,60,812	0/0:47,0:47:99:0,138,1907	0/0:29,0:29:87.25:0,87,1162	0/0:28,0:28:81.25:0,81,1098	0/0:21,0:21:63.21:0,63,868	0/0:6,0:6:18.06:0,18,252
chr10	49237135	.	AAGG	A	18742.71	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=20.054;DP=902;FS=6.927;HRun=0;HaplotypeScore=137.6127;InbreedingCoeff=0.9996;MQ=78.07;MQ0=0;MQRankSum=-7.656;QD=41.01;ReadPosRankSum=5.870;VQSLOD=5.6651;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,153,3404	0/0:11,0:11:33.11:0,33,759	0/0:29,0:29:75.23:0,75,1601	0/0:22,0:22:60.20:0,60,1240	1/1:1,26:27:60.21:1023,60,0	0/0:24,0:24:66.18:0,66,1453	0/0:32,0:32:90.31:0,90,2069	1/1:2,28:30:84.25:1351,84,0	0/0:28,0:28:81.26:0,81,1802	1/1:2,37:39:99:1933,114,0	1/1:1,21:22:48.08:756,48,0	1/1:1,51:52:99:2115,126,0	1/1:5,40:45:99:1983,117,0	1/1:1,45:46:99:1998,120,0	0/0:59,0:59:99:0,178,3944	0/0:44,0:44:99:0,126,2794	1/1:2,25:27:59.84:988,60,0	1/1:0,25:25:63.15:1041,63,0	0/0:30,0:30:83.75:0,84,1905	0/0:24,0:24:69.19:0,69,1506	0/0:56,0:56:99:0,169,3732	1/1:1,21:22:51.13:807,51,0	1/1:0,14:14:30.10:496,30,0	1/1:3,50:53:42.07:1772,42,0	1/1:1,15:16:36.12:614,36,0	1/1:2,29:31:87.28:1457,87,0	0/0:34,0:34:99:0,99,2258	1/1:0,8:8:24.08:409,24,0
chr10	49237491	.	AGGAGAAGAGG	A	1018.43	PASS	AC=6;AF=0.111;AN=54;BaseQRankSum=4.606;DP=648;FS=7.579;HRun=0;HaplotypeScore=167.3251;InbreedingCoeff=0.8442;MQ=67.04;MQ0=17;MQRankSum=-3.559;QD=15.20;ReadPosRankSum=-0.382;VQSLOD=1.9331;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:72.25:0,72,2708	0/0:8,0:8:18.05:0,18,579	0/0:86,0:27:27.50:0,27,415	0/0:113,0:35:47.30:0,47,676	0/0:13,0:13:24.08:0,24,1084	0/0:17,0:17:42.14:0,42,2010	0/0:18,0:18:39.09:0,39,1469	0/0:8,0:8:15.01:0,15,512	0/0:16,0:16:24.08:0,24,1135	0/0:15,0:15:21.07:0,21,985	0/0:11,0:11:24.08:0,24,771	0/0:22,0:22:39.10:0,39,1508	0/0:35,0:35:63.22:0,63,2986	0/0:23,0:23:51.18:0,51,2267	0/0:32,0:32:61.45:0,61,2442	0/0:17,0:17:36.08:0,36,1607	0/0:14,0:14:36.12:0,36,1526	0/0:15,0:15:33.11:0,33,1488	./.	1/1:7,11:18:12.04:326,12,0	1/1:10,19:28:3.01:92,3,0	0/0:17,0:17:34.36:0,34,1496	0/0:7,0:7:15.05:0,15,604	0/0:21,0:21:54.19:0,54,2529	0/0:12,0:12:21.07:0,21,985	0/0:21,0:21:42.14:0,42,1836	1/1:8,12:20:24.08:728,24,0	0/0:2,0:2:3.01:0,3,143
chr10	49238412	.	T	TA	26899.09	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-13.737;DP=807;FS=5.720;HRun=1;HaplotypeScore=69.3302;InbreedingCoeff=1.0000;MQ=83.45;MQ0=0;MQRankSum=-6.498;QD=39.97;ReadPosRankSum=3.687;VQSLOD=5.5917;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,26:27:72.20:1054,72,0	1/1:0,18:18:41.90:604,42,0	0/0:25,0:25:66.16:0,66,837	0/0:21,0:21:60.11:0,60,724	1/1:1,30:31:85.17:1260,85,0	0/0:28,0:28:81.22:0,81,1008	0/0:35,0:35:99:0,102,1278	1/1:1,33:34:99:1381,99,0	0/0:25,0:25:69.22:0,69,896	1/1:1,32:33:96.33:1439,96,0	1/1:0,20:20:60.14:872,60,0	1/1:2,34:36:90.30:1349,90,0	1/1:0,31:31:75.25:1124,75,0	1/1:0,38:38:99:1567,105,0	1/1:4,48:52:99:1933,129,0	1/1:3,36:39:96.33:1439,96,0	1/1:1,26:27:72.24:1079,72,0	1/1:1,23:24:60.20:899,60,0	1/1:0,28:28:84.28:1259,84,0	1/1:0,35:35:99:1459,99,0	1/1:2,30:32:87.29:1304,87,0	1/1:1,13:14:42.10:605,42,0	1/1:0,15:15:42.14:629,42,0	1/1:3,26:29:72.24:1079,72,0	1/1:1,29:30:78.26:1169,78,0	1/1:0,33:33:96.31:1415,96,0	1/1:1,30:31:87.29:1304,87,0	1/1:0,16:16:45.15:674,45,0
chr10	49238625	.	TTCCCG	T	2585.49	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=11.308;DP=701;FS=6.361;HRun=0;HaplotypeScore=135.9236;InbreedingCoeff=0.9995;MQ=87.87;MQ0=0;MQRankSum=-11.170;QD=42.39;ReadPosRankSum=0.874;VQSLOD=3.5219;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,20:22:38.34:731,38,0	1/1:1,12:13:30.53:582,31,0	0/0:35,0:35:93.22:0,93,2388	0/0:21,0:21:55.09:0,55,1521	0/0:28,0:28:78.25:0,78,2430	0/0:26,0:26:78.27:0,78,2409	0/0:23,0:23:63.21:0,63,1915	0/0:30,0:30:87.26:0,87,2405	0/0:33,0:33:96.33:0,96,3051	0/0:31,0:31:87.28:0,87,2655	0/0:20,0:20:60.19:0,60,1856	0/0:22,0:22:63.22:0,63,1971	0/0:31,0:31:93.32:0,93,2900	0/0:33,0:33:96.31:0,96,2924	1/1:3,23:26:73.14:1416,73,0	0/0:30,0:30:90.30:0,90,2793	0/0:25,0:25:72.17:0,72,1994	0/0:30,0:30:84.25:0,84,2580	0/0:36,0:36:99:0,105,2900	0/0:27,0:27:81.24:0,81,2440	0/0:14,0:14:42.10:0,42,1092	0/0:20,0:20:57.17:0,57,1653	0/0:11,0:11:30.10:0,30,898	0/0:26,0:26:78.27:0,78,2471	0/0:29,0:29:81.26:0,81,2439	0/0:21,0:21:63.21:0,63,1955	0/0:27,0:27:81.26:0,81,2521	0/0:11,0:11:33.11:0,33,1064
chr10	49240196	.	G	GTT	5069.21	PASS	AB=1.000;AC=38;AF=0.679;AN=56;BaseQRankSum=3.460;DP=456;FS=0.000;HRun=8;HaplotypeScore=77.5264;InbreedingCoeff=0.7527;MQ=76.43;MQ0=4;MQRankSum=-2.641;QD=17.36;ReadPosRankSum=-2.900;VQSLOD=2.3260;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:11:6.01:57,6,0	1/1:7,0:9:12.01:110,12,0	0/1:23,0:17:22.82:23,0,112	0/1:21,0:16:9.98:10,0,40	1/1:4,0:4:3.01:36,3,0	0/0:22,0:22:50.27:0,50,365	0/0:18,0:18:32.46:0,32,143	1/1:30,0:31:71.94:955,72,0	0/0:14,0:14:26.45:0,26,161	1/1:9,0:9:15.47:172,15,0	1/1:6,0:6:9.03:104,9,0	1/1:22,0:22:27:319,27,0	1/1:12,0:12:12.04:146,12,0	1/1:19,0:19:30.09:368,30,0	1/1:15,0:14:17.92:155,18,0	0/0:31,0:30:44.30:0,44,253	1/1:21,1:22:38.91:463,39,0	1/1:26,1:27:45.09:531,45,0	0/0:14,0:14:27.06:0,27,300	0/0:17,1:19:28.91:0,29,471	0/0:25,0:25:75.19:0,75,827	1/1:4,0:4:8.89:80,9,0	1/1:3,0:3:6.02:72,6,0	1/1:20,0:20:48.14:577,48,0	1/1:10,1:11:14.26:153,14,0	1/1:17,0:17:45.14:591,45,0	0/0:21,0:21:60.16:0,60,665	1/1:5,0:5:12.04:146,12,0
chr10	49240204	.	T	TTTG	8600.04	PASS	AB=0.686;AC=39;AF=0.696;AN=56;BaseQRankSum=-6.107;DP=493;FS=4.610;HRun=0;HaplotypeScore=72.1790;InbreedingCoeff=0.5591;MQ=73.33;MQ0=4;MQRankSum=-1.744;QD=25.83;ReadPosRankSum=-2.393;VQSLOD=3.7300;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,0:11:3.01:50,3,0	1/1:5,0:12:12.33:125,12,0	0/1:23,0:16:4:4,0,158	0/0:21,0:16:0.14:0,0,100	1/1:0,7:7:8.91:105,9,0	0/0:5,0:23:12.02:0,12,153	0/1:2,0:15:12.95:13,0,61	1/1:2,29:34:96.03:1495,96,0	1/1:0,0:12:0.22:16,0,0	1/1:0,8:12:29.89:367,30,0	1/1:1,6:7:9.03:188,9,0	1/1:0,15:17:27.09:581,27,0	1/1:1,10:12:12.02:232,12,0	1/1:0,18:20:30.10:663,30,0	0/1:2,0:23:17.66:182,0,18	0/0:8,0:34:0.31:0,0,161	1/1:1,21:24:39.10:818,39,0	1/1:1,22:24:45.08:905,45,0	0/0:11,0:11:30.07:0,30,432	0/0:21,0:21:20.32:0,20,695	0/0:26,0:26:78.15:0,78,1211	1/1:7,1:9:4.94:199,5,0	1/1:1,3:6:6.02:138,6,0	1/1:1,19:24:48.16:1091,48,0	1/1:1,9:14:15.05:289,15,0	1/1:1,17:22:51.10:861,51,0	0/0:23,0:23:69.06:0,69,980	1/1:0,5:5:12.04:278,12,0
chr10	49243103	.	T	TGTTCCAAG	3767.26	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-3.302;DP=500;FS=0.690;HRun=0;HaplotypeScore=120.5824;InbreedingCoeff=0.9911;MQ=92.96;MQ0=0;MQRankSum=-9.339;QD=94.18;ReadPosRankSum=-1.394;VQSLOD=3.7314;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,8:15:36.08:1267,36,0	1/1:3,6:9:20.89:849,21,0	0/0:29,0:29:69.20:0,69,1661	0/0:15,0:15:44.74:0,45,1118	0/0:21,0:21:57.18:0,57,1527	0/0:20,0:20:60.21:0,60,1699	0/0:18,0:18:51.18:0,51,1440	0/0:30,0:30:81.27:0,81,2123	0/0:8,0:8:24.07:0,24,610	0/0:21,0:21:63.22:0,63,1688	0/0:9,0:9:27.09:0,27,764	0/0:10,0:10:27.09:0,27,764	0/0:14,0:14:42.14:0,42,1163	0/0:19,0:19:57.20:0,57,1612	1/1:4,11:16:39.13:1651,39,0	0/0:15,0:15:45.14:0,45,1180	0/0:26,0:26:72.22:0,72,1974	0/0:22,0:22:66.18:0,66,1803	0/0:15,0:15:39.12:0,39,1017	0/0:19,0:19:57.20:0,57,1603	0/0:5,0:5:15.05:0,15,425	0/0:10,0:10:30.10:0,30,824	0/0:13,0:13:39.13:0,39,1071	0/0:25,0:25:69.20:0,69,1732	0/0:24,0:24:72.22:0,72,1856	0/0:21,0:21:60.20:0,60,1582	0/0:28,0:27:78.25:0,78,2139	0/0:23,0:23:63.22:0,63,1702
chr10	49243343	.	A	ATTTTTTCTCCCTC	5202.86	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-2.039;DP=507;FS=0.768;HRun=0;HaplotypeScore=174.8168;InbreedingCoeff=0.9749;MQ=73.96;MQ0=0;MQRankSum=-8.599;QD=113.11;ReadPosRankSum=2.687;VQSLOD=5.1162;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,13:19:33.11:2159,33,0	1/1:0,4:6:9.03:609,9,0	0/0:15,0:15:38.89:0,39,983	0/0:9,0:9:24.08:0,24,794	0/0:19,0:19:57.18:0,57,2062	0/0:17,0:17:51.17:0,51,1827	0/0:18,0:18:54.11:0,54,1821	0/0:29,0:29:81.26:0,81,2682	0/0:19,0:19:54.19:0,54,1797	0/0:17,0:17:51.18:0,51,1958	0/0:18,0:18:54.19:0,54,2174	0/0:18,0:18:54.17:0,54,2001	0/0:21,0:21:63.18:0,63,2493	0/0:23,0:23:69.22:0,69,2677	1/1:0,16:21:36.12:2435,36,0	0/0:22,0:22:66.23:0,66,2219	0/0:18,0:18:42.39:0,42,1841	0/0:19,0:19:57.20:0,57,2144	0/0:13,0:13:39.11:0,39,1266	0/0:18,0:18:53.90:0,54,1799	0/0:24,0:24:69.20:0,69,2429	0/0:10,0:10:30.09:0,30,1090	0/0:18,0:18:51.13:0,51,1674	0/0:27,0:27:78.25:0,78,2971	0/0:18,0:18:54.16:0,54,1870	0/0:19,0:19:57.19:0,57,2044	0/0:25,0:25:75.24:0,75,2605	0/0:7,0:7:18.05:0,18,569
chr10	49243532	.	A	AT	218.77	PASS	AB=0.675;AC=1;AF=0.018;AN=56;BaseQRankSum=-3.379;DP=614;FS=2.806;HRun=7;HaplotypeScore=59.0858;InbreedingCoeff=-0.0199;MQ=77.02;MQ0=0;MQRankSum=-0.168;QD=8.10;ReadPosRankSum=1.841;VQSLOD=0.3356;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:78.08:0,78,739	0/0:4,0:4:12.02:0,12,116	0/0:16,0:16:35.95:0,36,346	0/0:13,0:13:36.06:0,36,347	0/0:35,0:35:96.13:0,96,921	0/0:26,0:26:72.11:0,72,695	0/0:18,0:18:45.06:0,45,429	0/0:24,0:24:60.08:0,60,575	0/0:15,0:15:36.03:0,36,342	0/0:35,0:35:99:0,99,953	0/0:23,0:23:57.08:0,57,550	0/0:23,0:23:63.10:0,63,608	0/0:25,0:25:60.03:0,60,555	0/0:23,0:23:60.08:0,60,574	0/0:33,0:33:90.09:0,90,859	0/1:14,13:27:99:293,0,290	0/0:23,0:23:63.10:0,63,608	0/0:18,0:18:50.84:0,51,467	0/0:18,0:18:48.05:0,48,454	0/0:28,0:28:78.11:0,78,748	0/0:13,0:13:36.02:0,36,336	0/0:19,0:19:51.08:0,51,493	0/0:16,0:16:45.02:0,45,417	0/0:20,0:20:54.08:0,54,521	0/0:29,0:29:81.11:0,81,775	0/0:30,0:30:87.14:0,87,840	0/0:23,0:23:66.09:0,66,632	0/0:7,0:7:15.02:0,15,145
chr10	49244000	.	TA	T	8946.65	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=18.865;DP=677;FS=13.054;HRun=2;HaplotypeScore=100.7330;InbreedingCoeff=0.9990;MQ=82.01;MQ0=0;MQRankSum=-4.458;QD=36.08;ReadPosRankSum=1.757;VQSLOD=3.8674;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:99:0,99,1482	0/0:11,0:11:33.11:0,33,494	0/0:22,0:22:60.20:0,60,876	0/0:19,0:19:19.05:0,19,706	1/1:1,37:38:99:1402,108,0	0/0:29,0:29:87.29:0,87,1304	0/0:27,0:27:81.27:0,81,1195	1/1:3,29:32:87.24:1087,87,0	0/0:21,0:21:63.21:0,63,944	1/1:1,20:21:63.20:810,63,0	1/1:2,23:25:66.21:857,66,0	0/0:32,0:32:96.28:0,96,1413	0/0:29,0:29:87.29:0,87,1302	1/1:1,23:24:63.20:818,63,0	0/0:23,0:23:69.23:0,69,1034	0/0:32,0:32:93.28:0,93,1367	1/1:0,23:23:63.20:818,63,0	1/1:0,13:13:36.12:467,36,0	0/0:14,0:14:42.14:0,42,628	0/0:31,0:31:90.29:0,90,1329	0/0:23,0:23:69.23:0,69,1030	0/0:22,0:22:63.19:0,63,905	0/0:18,0:18:54.16:0,54,771	0/0:14,0:14:42.14:0,42,629	1/1:0,31:31:87.28:1130,87,0	1/1:1,23:24:69.22:896,69,0	0/0:29,0:29:87.29:0,87,1279	1/1:0,17:17:51.17:662,51,0
chr10	49244083	.	A	AT	577.84	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-0.270;DP=583;FS=3.102;HRun=6;HaplotypeScore=95.0266;InbreedingCoeff=0.9841;MQ=75.53;MQ0=1;MQRankSum=-3.157;QD=25.12;ReadPosRankSum=-0.254;VQSLOD=3.2151;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:69.15:0,69,702	0/0:7,0:7:18.04:0,18,183	0/0:14,0:14:36.08:0,36,366	0/0:12,0:12:23.74:0,24,223	0/0:26,0:26:69.15:0,69,704	0/0:20,0:20:60.14:0,60,611	0/0:21,0:21:51.09:0,51,511	0/0:33,0:33:96.14:0,96,950	0/0:16,0:16:42.06:0,42,414	0/0:16,0:16:39.07:0,39,390	0/0:25,0:25:63.13:0,63,639	0/0:31,0:31:81.17:0,81,819	0/0:29,0:28:78.17:0,78,795	0/0:11,0:11:20.60:0,21,182	0/0:26,0:26:72.16:0,72,733	1/1:5,18:23:54.17:673,54,0	0/0:18,0:16:42.06:0,42,415	0/0:15,0:15:39.07:0,39,388	0/0:19,0:19:48.08:0,48,477	0/0:22,0:22:51.11:0,51,519	0/0:14,0:14:33.07:0,33,337	0/0:24,0:24:63.13:0,63,637	0/0:25,0:24:66.07:0,66,671	0/0:18,0:18:39.24:0,39,413	0/0:24,0:24:57.09:0,57,567	0/0:16,0:16:33.06:0,33,336	0/0:38,0:36:99:0,99,1004	0/0:13,0:13:30.07:0,30,306
chr10	49244105	.	C	CT	1954.16	PASS	AB=0.732;AC=24;AF=0.429;AN=56;BaseQRankSum=-7.308;DP=602;FS=7.347;HRun=15;HaplotypeScore=109.5001;InbreedingCoeff=0.5396;MQ=67.19;MQ0=4;MQRankSum=1.865;QD=5.99;ReadPosRankSum=-5.456;VQSLOD=0.8311;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:31:36.58:0,37,105	0/0:1,0:9:8.14:0,8,24	0/0:14,0:10:0.21:0,0,10	0/1:13,1:11:6.70:17,0,7	1/1:9,7:18:19.78:121,20,0	0/0:23,1:25:26.91:0,27,268	0/0:17,0:19:33.40:0,33,191	0/1:24,11:36:41.09:133,0,41	0/0:14,0:17:12.91:0,13,54	1/1:12,5:19:19.91:175,20,0	1/1:14,15:31:22.91:233,23,0	0/0:8,0:27:34.57:0,35,97	0/0:10,0:26:27.66:0,28,78	1/1:7,8:15:9.86:73,10,0	0/0:5,0:27:40.69:0,41,117	0/0:13,0:23:30.71:0,31,99	0/1:11,15:26:16:192,0,16	1/1:9,1:15:17.51:118,18,0	1/1:9,2:16:2.56:97,3,0	1/1:9,17:27:29.99:192,30,0	0/1:7,7:14:12.02:19,0,12	0/0:5,0:17:16.21:0,16,46	0/0:5,0:23:24.20:0,24,69	0/0:4,0:17:18.31:0,18,52	0/1:18,5:24:3.93:140,0,4	0/1:9,15:24:3.10:185,0,3	1/1:33,3:34:10.61:265,11,0	1/1:2,6:9:23.82:190,24,0
chr10	49244459	.	G	GTTT	2739.30	PASS	AB=0.831;AC=34;AF=0.607;AN=56;BaseQRankSum=6.443;DP=471;FS=7.130;HRun=13;HaplotypeScore=90.5755;InbreedingCoeff=0.4798;MQ=71.67;MQ0=1;MQRankSum=-1.589;QD=8.78;ReadPosRankSum=-1.765;VQSLOD=0.0804;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:33:56.97:720,57,0	1/1:6,0:12:7.21:107,7,0	0/0:18,0:11:0.64:0,1,54	0/1:14,0:12:5.18:37,0,5	0/0:13,0:19:21.85:0,22,247	1/1:2,0:14:8.73:23,9,0	0/1:7,0:18:3.31:3,0,41	0/0:21,0:21:6.47:0,6,210	0/1:4,0:17:5.38:22,0,5	0/1:12,0:14:25.85:26,0,139	0/0:18,0:22:35.36:0,35,365	1/1:13,4:16:15:197,15,0	1/1:16,0:18:21.05:282,21,0	0/0:12,0:13:10.48:0,10,260	1/1:12,0:21:44.76:417,45,0	1/1:10,3:13:5.99:75,6,0	0/0:25,0:28:57.10:0,57,572	0/0:17,0:19:32.80:0,33,368	1/1:14,0:16:20.77:187,21,0	1/1:7,0:19:29.88:266,30,0	1/1:2,0:8:8.13:44,8,0	1/1:10,1:15:21.54:301,22,0	1/1:11,0:15:2.96:20,3,0	1/1:8,0:14:6.96:87,7,0	0/1:15,0:15:29.42:29,0,89	0/0:15,0:19:24.10:0,24,246	1/1:1,0:8:11.83:79,12,0	0/1:9,0:10:6.59:7,0,74
chr10	49245264	.	AGAAAGGAG	A	2306	PASS	AB=1.000;AC=14;AF=0.259;AN=54;BaseQRankSum=-4.222;DP=391;FS=2.499;HRun=0;HaplotypeScore=136.6645;InbreedingCoeff=-0.2011;MQ=51.65;MQ0=5;MQRankSum=4.819;QD=10.29;ReadPosRankSum=-3.133;VQSLOD=1.6336;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:13,0:13:99:251,0,141	0/1:2,0:2:41.86:42,0,59	./.	0/0:4,0:2:5.60:0,6,38	0/0:13,0:13:39.13:0,39,775	0/0:15,0:15:8.55:0,9,97	0/1:25,0:25:7.67:8,0,147	0/0:16,0:14:30.70:0,31,373	0/0:14,0:14:23.83:0,24,502	0/0:17,0:17:49.01:0,49,1081	0/0:8,0:8:24.08:0,24,499	1/1:0,24:25:9.03:235,9,0	0/0:18,0:18:29.96:0,30,390	0/0:12,0:12:6.02:0,6,151	0/1:21,0:21:99:415,0,280	0/1:22,0:22:41.11:41,0,493	0/0:18,0:18:49.37:0,49,1064	0/0:7,0:7:12.93:0,13,319	0/1:26,0:24:99:414,0,239	0/1:14,0:13:99:245,0,132	0/1:15,0:15:99:146,0,406	0/1:16,0:16:95.23:95,0,732	0/1:20,0:19:99:265,0,578	0/1:11,0:11:22.50:23,0,306	0/0:12,0:11:30.10:0,30,682	0/0:9,0:9:24.08:0,24,528	0/1:14,0:14:99:280,0,233	0/0:2,0:2:6.02:0,6,101
chr10	49245266	.	AAAGGAGGG	A	2548.75	PASS	AB=0.957;AC=12;AF=0.214;AN=56;BaseQRankSum=-4.425;DP=387;FS=1.014;HRun=0;HaplotypeScore=134.6503;InbreedingCoeff=-0.1339;MQ=51.58;MQ0=5;MQRankSum=4.199;QD=13.56;ReadPosRankSum=-0.771;VQSLOD=2.4584;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:14,0:14:99:121,0,103	0/1:3,0:3:32.27:32,0,68	0/0:2,0:1:2.99:0,3,23	0/0:3,0:2:5.61:0,6,65	0/0:13,0:13:38.96:0,39,716	0/0:15,0:14:37:0,37,327	0/0:24,0:24:32.21:0,32,436	0/0:15,0:13:33.29:0,33,546	0/0:14,0:14:38.68:0,39,530	0/0:16,0:16:28.95:0,29,846	0/0:8,0:8:23.92:0,24,474	1/1:25,0:25:9.03:191,9,0	0/0:17,0:17:27.04:0,27,276	0/0:12,0:12:6.01:0,6,126	0/1:20,0:20:99:172,0,166	0/1:22,0:22:99:123,0,388	0/0:18,0:18:45:0,45,903	0/0:7,0:7:12.91:0,13,251	0/1:7,20:24:44.53:796,0,45	0/1:13,0:12:19.71:430,0,20	0/1:14,0:14:99:264,0,168	0/1:16,0:16:14.44:14,0,564	0/1:20,0:19:92.73:93,0,455	0/0:11,0:11:1.48:0,1,224	0/0:12,0:11:17.96:0,18,539	0/0:10,0:10:27.03:0,27,584	0/1:14,0:14:68.03:464,0,68	0/0:2,0:2:6.01:0,6,103
chr10	49245268	.	A	AGAAAGAAG	6583.07	PASS	AB=1.000;AC=33;AF=0.611;AN=54;BaseQRankSum=-6.610;DP=386;FS=0.432;HRun=0;HaplotypeScore=130.1554;InbreedingCoeff=0.2037;MQ=51.73;MQ0=4;MQRankSum=-4.540;QD=22.17;ReadPosRankSum=1.011;VQSLOD=4.4718;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:13,0:13:99:151,0,165	0/1:3,0:3:40.19:40,0,45	./.	0/0:4,0:3:7.82:0,8,64	1/1:14,0:14:32.84:444,33,0	0/1:14,0:14:17.56:18,0,129	0/1:24,0:24:99:107,0,121	1/1:15,0:13:26.08:207,26,0	1/1:13,0:13:7.96:288,8,0	1/1:1,14:16:47.84:850,48,0	1/1:7,0:7:20.13:222,20,0	0/0:25,0:25:9.03:0,9,151	0/0:7,0:17:26.84:0,27,473	1/1:1,12:15:3.01:126,3,0	0/1:20,0:20:99:408,0,218	1/1:21,0:21:33.06:510,33,0	1/1:18,0:18:53.83:839,54,0	1/1:5,1:6:11.95:165,12,0	0/1:26,0:24:40.52:41,0,248	0/0:9,0:12:7.77:0,8,167	0/0:11,0:14:7.14:0,7,196	0/1:16,0:16:99:247,0,128	0/1:19,0:18:99:434,0,181	0/1:10,0:10:13.43:274,0,13	1/1:12,0:11:32.93:691,33,0	1/1:2,9:12:25.86:424,26,0	0/0:12,0:15:32.83:0,33,252	1/1:2,0:2:6:98,6,0
chr10	49245274	.	G	GAGGA	769.67	PASS	AB=0.964;AC=12;AF=0.214;AN=56;BaseQRankSum=5.216;DP=379;FS=2.813;HRun=0;HaplotypeScore=116.8547;InbreedingCoeff=-0.2151;MQ=53.43;MQ0=4;MQRankSum=-6.406;QD=4.78;ReadPosRankSum=1.558;VQSLOD=2.3287;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:35.41:0,35,362	0/1:3,0:3:2.11:2,0,60	0/0:2,0:2:5.79:0,6,36	0/1:5,0:4:10.94:11,0,99	0/0:12,0:12:29.40:0,29,218	0/1:13,0:12:43.41:43,0,75	0/1:21,0:21:49.24:248,0,49	0/0:16,0:14:32.59:0,33,257	0/1:14,0:14:4.76:194,0,5	0/1:15,0:15:22.74:23,0,111	0/1:6,0:6:9.79:10,0,71	0/0:25,0:25:9.02:0,9,109	0/0:16,0:16:20.79:0,21,197	0/1:17,0:17:8.15:13,0,8	0/0:17,0:17:34.65:0,35,448	0/1:6,17:25:55.11:340,0,55	0/1:16,0:16:3.41:3,0,191	0/0:3,0:3:8.69:0,9,53	0/0:25,0:23:16.87:0,17,298	0/1:14,0:13:6.09:6,0,141	0/0:15,0:15:6.35:0,6,173	0/0:15,0:15:42.04:0,42,470	0/0:17,0:17:25.71:0,26,428	0/0:8,0:8:11.34:0,11,79	0/1:12,0:11:12.85:13,0,104	0/0:11,0:11:12.87:0,13,214	0/0:16,0:16:0.62:0,1,250	0/0:2,0:2:5.94:0,6,45
chr10	49245525	.	T	TATGGCC	18858.08	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-11.046;DP=654;FS=12.942;HRun=0;HaplotypeScore=124.1156;InbreedingCoeff=0.9966;MQ=81.82;MQ0=2;MQRankSum=-18.979;QD=86.90;ReadPosRankSum=1.739;VQSLOD=6.3159;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,114,2617	0/0:7,0:7:21.06:0,21,451	0/0:20,0:20:51.18:0,51,1155	0/0:23,0:23:60.08:0,60,1179	0/0:24,0:24:69.24:0,69,1594	1/1:5,28:33:87.30:3023,87,0	1/1:2,20:23:63.17:2152,63,0	0/0:41,0:41:99:0,114,2647	1/1:4,25:31:81.23:2766,81,0	0/0:19,0:19:57.20:0,57,1344	0/0:16,0:16:48.14:0,48,1085	0/0:29,0:29:87.28:0,87,2011	0/0:22,0:22:66.23:0,66,1537	0/0:16,0:16:48.16:0,48,1115	0/0:31,0:31:90.28:0,90,2036	1/1:8,31:39:99:3848,111,0	0/0:29,0:29:84.29:0,84,1964	0/0:18,0:18:51.18:0,51,1180	1/1:11,11:22:63.22:2082,63,0	1/1:6,10:16:39.13:1377,39,0	1/1:11,8:21:39.13:1320,39,0	0/0:24,0:24:63.22:0,63,1488	0/0:14,0:14:42.14:0,42,962	0/0:24,0:24:69.22:0,69,1581	0/0:11,0:11:33.11:0,33,757	0/0:24,0:24:66.22:0,66,1500	1/1:7,19:29:66.23:2291,66,0	0/0:5,0:5:15.05:0,15,350
chr10	49248424	.	T	TACACAC	5765.35	PASS	AB=0.739;AC=46;AF=0.920;AN=50;BaseQRankSum=-4.488;DP=679;FS=3.276;HRun=0;HaplotypeScore=205.3328;InbreedingCoeff=0.1927;MQ=58.23;MQ0=10;MQRankSum=0.101;QD=9.81;ReadPosRankSum=0.128;VQSLOD=4.0202;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:42,2:45:32.96:682,33,0	1/1:9,0:9:6.02:121,6,0	./.	./.	1/1:28,0:28:5.64:61,6,0	1/1:20,0:19:12.44:188,12,0	1/1:19,7:29:11.20:353,11,0	1/1:23,0:22:12.76:91,13,0	1/1:9,9:20:7.97:204,8,0	1/1:24,2:27:25.28:583,25,0	./.	0/1:11,1:21:34.60:194,0,35	1/1:15,5:23:21.05:559,21,0	1/1:19,3:32:3.46:39,3,0	1/1:12,9:25:11.83:315,12,0	0/0:7,0:19:13.86:0,14,167	1/1:18,0:17:14.81:136,15,0	0/1:15,2:20:19.76:183,0,20	1/1:22,0:20:21.87:348,22,0	1/1:21,0:21:7.80:118,8,0	1/1:20,0:19:11.97:130,12,0	1/1:14,6:20:8.67:215,9,0	1/1:14,3:21:2.17:37,2,0	1/1:31,0:41:2.77:38,3,0	1/1:23,10:37:4.53:256,5,0	1/1:26,0:26:23.06:352,23,0	1/1:23,0:23:15.63:245,16,0	1/1:7,1:13:14.97:317,15,0
chr10	49248899	.	G	GCC	17444.54	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=-11.479;DP=623;FS=0.976;HRun=1;HaplotypeScore=67.7950;InbreedingCoeff=0.9982;MQ=91.49;MQ0=2;MQRankSum=-3.587;QD=49.98;ReadPosRankSum=4.685;VQSLOD=4.8391;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,25:28:66.23:1275,66,0	1/1:1,7:8:21.07:405,21,0	0/0:23,0:23:63.20:0,63,924	0/0:31,0:31:78.21:0,78,1124	0/0:31,0:31:93.30:0,93,1392	1/1:3,23:26:72.25:1391,72,0	1/1:0,19:19:45.15:870,45,0	0/0:37,0:37:99:0,99,1463	1/1:1,25:27:78.27:1503,78,0	0/0:28,0:28:84.27:0,84,1242	0/0:16,0:16:45.15:0,45,684	1/1:0,22:24:60.21:1159,60,0	1/1:1,28:31:77.78:1503,78,0	0/0:17,0:17:51.16:0,51,760	1/1:1,24:25:63.22:1217,63,0	1/1:0,27:27:75.26:1449,75,0	0/0:17,0:17:51.17:0,51,781	0/0:18,0:18:54.16:0,54,802	1/1:0,17:16:48.14:828,48,0	1/1:1,16:17:48.16:927,48,0	1/1:1,18:21:57.20:1101,57,0	1/1:0,15:15:36.12:690,36,0	1/1:1,24:25:69.24:1333,69,0	1/1:0,13:13:30.10:580,30,0	0/0:20,0:20:57.19:0,57,873	0/0:30,0:30:90.30:0,90,1354	1/1:1,25:25:63.22:1215,63,0	0/0:6,0:6:18.02:0,18,230
chr10	49249080	.	ATT	A	3595.77	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-10.759;DP=452;FS=3.069;HRun=12;HaplotypeScore=81.2716;InbreedingCoeff=0.9522;MQ=75.83;MQ0=0;MQRankSum=0.219;QD=20.20;ReadPosRankSum=3.843;VQSLOD=3.4059;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,15:20:28.23:329,28,0	1/1:0,7:9:5.48:166,5,0	0/0:13,0:13:19.80:0,20,144	0/0:10,0:11:14.31:0,14,150	0/0:4,0:23:50.63:0,51,222	0/0:20,0:20:51.91:0,52,471	0/0:10,0:11:18.96:0,19,213	0/0:8,0:24:38.62:0,39,167	0/0:19,0:19:54.07:0,54,512	0/0:3,0:16:34.77:0,35,139	0/0:4,0:21:38.44:0,38,183	1/1:2,14:16:39:383,39,0	1/1:1,12:13:33.07:336,33,0	0/0:1,0:4:7.49:0,7,26	1/1:6,12:18:33.03:336,33,0	0/0:15,0:17:37.73:0,38,374	0/0:7,1:21:17.38:0,17,228	0/0:7,1:20:13.45:0,13,179	1/1:4,10:16:23.29:251,23,0	1/1:3,18:22:41.70:463,42,0	1/1:1,4:5:12:122,12,0	1/1:4,8:12:17.58:181,18,0	1/1:0,11:12:29.80:286,30,0	1/1:2,10:13:26.79:256,27,0	0/0:7,1:22:10.94:0,11,149	0/0:6,0:21:40.32:0,40,176	1/1:4,18:22:47.99:488,48,0	0/0:2,0:10:25.98:0,26,160
chr10	49249186	.	A	AT	1529.34	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-2.990;DP=355;FS=11.237;HRun=6;HaplotypeScore=34.5959;InbreedingCoeff=0.9131;MQ=65.79;MQ0=0;MQRankSum=1.693;QD=29.99;ReadPosRankSum=1.166;VQSLOD=3.1680;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:8:21.05:0,21,214	0/0:7,0:7:18.04:0,18,184	0/0:3,0:3:6.01:0,6,61	0/0:3,0:3:8.94:0,9,71	0/0:26,0:26:72.12:0,72,719	0/0:23,0:23:63.14:0,63,643	0/0:10,0:10:24.05:0,24,244	0/0:41,0:40:99:0,108,1102	0/0:10,0:10:27.06:0,27,275	0/0:13,0:13:36.08:0,36,367	0/0:17,0:17:45.06:0,45,440	0/0:6,0:6:18.04:0,18,184	0/0:11,0:11:24.03:0,24,237	0/0:11,0:11:21.04:0,21,214	0/0:18,0:18:51.11:0,51,520	0/0:11,0:11:27.03:0,27,266	0/0:18,0:18:42.06:0,42,419	0/0:17,0:17:42.09:0,42,428	1/1:2,13:15:39.12:491,39,0	1/1:4,12:16:42.13:517,42,0	1/1:1,5:6:15.05:189,15,0	0/0:4,0:4:9:0,9,84	0/0:9,0:9:27.06:0,27,275	0/0:4,0:4:9.02:0,9,92	0/0:9,0:9:27.06:0,27,275	0/0:12,0:12:36.07:0,36,362	1/1:0,14:14:39.12:491,39,0	0/0:13,0:13:39.09:0,39,398
chr10	49249671	.	C	CT	4068.19	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-1.462;DP=646;FS=0.858;HRun=1;HaplotypeScore=71.0943;InbreedingCoeff=0.9970;MQ=81.23;MQ0=0;MQRankSum=-1.229;QD=42.38;ReadPosRankSum=-0.312;VQSLOD=3.8416;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,99,1268	0/0:11,0:11:33.11:0,33,429	0/0:13,0:13:16.89:0,17,319	0/0:23,0:23:54.14:0,54,671	0/0:19,0:19:54.15:0,54,671	0/0:24,0:23:69.22:0,69,896	0/0:18,0:18:54.18:0,54,699	0/0:36,0:36:99:0,102,1300	0/0:21,0:21:60.19:0,60,776	0/0:17,0:17:51.17:0,51,662	0/0:27,0:27:78.25:0,78,1012	0/0:25,0:25:75.24:0,75,974	0/0:17,0:17:51.15:0,51,647	0/0:22,0:22:63.20:0,63,818	0/0:36,0:35:99:0,108,1372	0/0:33,0:33:99:0,99,1286	0/0:26,0:27:78.23:0,78,997	0/0:30,0:31:74.22:0,74,1150	1/1:0,20:20:60.19:879,60,0	1/1:2,25:27:72.24:1079,72,0	1/1:0,25:25:75.25:1123,75,0	0/0:16,0:16:48.16:0,48,623	0/0:17,0:17:48.16:0,48,623	0/0:22,0:22:66.20:0,66,841	0/0:21,0:21:63.18:0,63,801	0/0:21,0:21:60.19:0,60,766	1/1:0,23:24:66.22:986,66,0	0/0:19,0:19:57.19:0,57,740
chr10	49249959	.	GT	G	4270.41	PASS	AB=0.882;AC=17;AF=0.304;AN=56;BaseQRankSum=14.042;DP=635;FS=6.477;HRun=9;HaplotypeScore=61.9980;InbreedingCoeff=0.9162;MQ=70.29;MQ0=0;MQRankSum=-0.881;QD=21.04;ReadPosRankSum=1.677;VQSLOD=5.6059;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:25:72.01:0,72,789	0/0:8,0:9:26.91:0,27,291	0/0:7,0:7:18.03:0,18,192	0/1:13,1:14:1.83:2,0,224	0/0:31,0:31:87.23:0,87,985	1/1:1,27:28:81.04:741,81,0	1/1:6,10:16:27.01:247,27,0	0/0:35,0:35:72.21:0,72,831	1/1:1,22:23:66.03:604,66,0	0/0:24,0:24:63.19:0,63,727	0/0:29,1:30:47.75:0,48,795	0/0:26,0:26:75.19:0,75,844	0/0:24,0:24:66.20:0,66,761	0/0:19,0:19:57.17:0,57,658	0/0:39,0:39:99:0,114,1307	1/1:0,18:18:54.03:494,54,0	0/0:21,0:21:54.16:0,54,623	0/0:19,0:19:54.12:0,54,599	1/1:8,22:30:2.82:534,3,0	1/1:3,23:26:69.04:631,69,0	1/1:4,15:19:42.01:384,42,0	0/0:13,0:13:36.11:0,36,412	0/0:19,0:19:50.94:0,51,567	0/0:22,0:22:59.18:0,59,646	0/0:26,0:26:75.22:0,75,858	0/0:25,0:25:63.19:0,63,727	1/1:2,26:28:69.03:632,69,0	0/0:17,0:18:53.95:0,54,572
chr10	49250342	.	G	GCC	3002.88	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-11.849;DP=800;FS=5.368;HRun=6;HaplotypeScore=107.2668;InbreedingCoeff=0.9982;MQ=77.48;MQ0=1;MQRankSum=-0.439;QD=37.54;ReadPosRankSum=1.747;VQSLOD=2.7982;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,126,1484	0/0:14,0:14:36.09:0,36,423	0/0:15,0:15:30.08:0,30,364	0/0:18,0:18:33.05:0,33,374	0/0:29,0:29:78.20:0,78,935	1/1:2,22:23:54.18:913,54,0	1/1:4,30:34:78.27:1319,78,0	0/0:25,0:25:48.13:0,48,574	1/1:2,20:22:54.18:913,54,0	0/0:32,0:32:81.18:0,81,957	0/0:17,0:17:39.10:0,39,462	0/0:33,0:33:96.30:0,96,1170	0/0:39,0:39:99:0,108,1260	0/0:42,0:42:99:0,117,1388	0/0:34,0:34:90.26:0,90,1085	0/0:33,0:33:96.29:0,96,1158	0/0:30,0:30:87.24:0,87,1046	0/0:35,0:35:99:0,105,1278	0/0:23,0:23:62.57:0,63,682	0/0:20,0:20:51.15:0,51,611	0/0:71,0:71:99:0,190,2225	0/0:26,0:26:75.21:0,75,891	0/0:26,0:26:57.16:0,57,695	0/0:29,0:29:87.23:0,87,1032	0/0:21,0:21:60.19:0,60,732	0/0:24,0:24:60.17:0,60,716	0/0:24,0:24:66.15:0,66,754	0/0:8,0:8:21.06:0,21,256
chr10	49250817	.	AG	A	3506.14	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=13.607;DP=739;FS=7.714;HRun=2;HaplotypeScore=82.3076;InbreedingCoeff=0.9998;MQ=79.55;MQ0=0;MQRankSum=1.498;QD=36.15;ReadPosRankSum=1.755;VQSLOD=4.0748;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,99,1483	0/0:16,0:16:48.16:0,48,719	0/0:15,0:15:39.08:0,39,536	0/0:19,0:19:29.64:0,30,551	0/0:30,0:30:87.29:0,87,1302	1/1:0,25:25:72.23:935,72,0	1/1:1,18:19:54.18:701,54,0	0/0:38,0:38:99:0,111,1628	1/1:0,22:22:60.20:779,60,0	0/0:30,0:30:87.29:0,87,1304	0/0:18,0:18:54.17:0,54,777	0/0:43,0:43:99:0,126,1887	0/0:40,0:40:99:0,120,1792	0/0:19,0:19:57.18:0,57,834	0/0:35,0:35:99:0,105,1574	1/1:1,30:31:84.27:1091,84,0	0/0:20,0:20:60.19:0,60,879	0/0:20,0:19:57.19:0,57,851	0/0:22,0:22:60.19:0,60,878	0/0:28,0:28:84.26:0,84,1217	0/0:39,0:39:99:0,108,1565	0/0:28,0:28:84.28:0,84,1255	0/0:27,0:27:81.27:0,81,1212	0/0:19,0:19:54.17:0,54,788	0/0:26,0:26:78.26:0,78,1149	0/0:25,0:25:72.24:0,72,1075	0/0:38,0:38:99:0,114,1708	0/0:12,0:12:36.12:0,36,536
chr10	49252738	.	TGAG	T	5139.93	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=13.098;DP=855;FS=4.592;HRun=0;HaplotypeScore=120.0398;InbreedingCoeff=1.0000;MQ=66.33;MQ0=0;MQRankSum=-4.075;QD=41.12;ReadPosRankSum=0.215;VQSLOD=6.2503;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,129,2792	0/0:15,0:15:45.15:0,45,1020	0/0:20,0:18:48.16:0,48,981	0/0:18,0:18:39.13:0,39,880	0/0:42,0:42:99:0,123,2733	0/0:32,0:32:93.29:0,93,2023	0/0:34,0:34:90.28:0,90,1953	0/0:31,0:31:87.30:0,87,1969	0/0:25,0:25:75.24:0,75,1656	0/0:41,0:41:99:0,120,2715	0/0:18,0:18:48.16:0,48,1088	0/0:37,0:37:99:0,111,2462	0/0:40,0:40:99:0,120,2716	0/0:20,0:20:57.18:0,57,1248	0/0:56,0:56:99:0,169,3771	0/0:40,0:40:99:0,120,2675	0/0:32,0:32:93.32:0,93,2107	0/0:16,0:16:42.12:0,42,887	1/1:2,23:25:66.18:1026,66,0	1/1:0,39:39:99:1746,105,0	1/1:2,27:29:63.22:1049,63,0	0/0:33,0:33:99:0,99,2241	0/0:35,0:35:99:0,102,2226	0/0:27,0:27:78.25:0,78,1723	0/0:24,0:24:72.23:0,72,1588	0/0:32,0:32:96.32:0,96,2110	1/1:0,32:32:81.23:1319,81,0	0/0:19,0:19:57.20:0,57,1291
chr10	49253391	.	ACACACGCAGCGC	A	4448.18	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=10.361;DP=711;FS=0.000;HRun=0;HaplotypeScore=239.9490;InbreedingCoeff=0.9980;MQ=74.83;MQ0=3;MQRankSum=-10.709;QD=49.42;ReadPosRankSum=0.321;VQSLOD=4.3265;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,114,6665	0/0:18,0:18:54.19:0,54,3250	0/0:19,0:19:45.15:0,45,2126	0/0:19,0:19:33.58:0,34,1294	0/0:32,0:32:93.32:0,93,5010	0/0:32,0:32:90.31:0,90,5131	0/0:38,0:38:99:0,114,6455	0/0:21,0:21:57.19:0,57,3042	0/0:18,0:18:51.18:0,51,2987	0/0:24,0:24:72.25:0,72,4193	0/0:20,0:20:57.20:0,57,2977	0/0:39,0:39:99:0,108,6374	0/0:25,0:25:66.23:0,66,3978	0/0:25,0:25:69.19:0,69,3794	0/0:21,0:21:63.17:0,63,3572	0/0:10,0:10:27.09:0,27,1372	0/0:43,0:43:99:0,117,6721	0/0:29,0:29:81.28:0,81,4759	1/1:5,8:13:24.08:889,24,0	1/1:6,19:24:36.12:1269,36,0	1/1:13,19:30:21.54:656,22,0	0/0:19,0:19:57.20:0,57,3444	0/0:22,0:22:60.21:0,60,3291	0/0:42,0:42:99:0,123,7060	0/0:24,0:24:63.22:0,63,3585	0/0:21,0:21:60.20:0,60,3230	1/1:3,17:20:45.15:1634,45,0	0/0:19,0:19:54.19:0,54,3283
chr10	49254140	.	G	GTTTTA	13463.36	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=-2.448;DP=530;FS=7.422;HRun=0;HaplotypeScore=96.4527;InbreedingCoeff=0.9222;MQ=65.45;MQ0=1;MQRankSum=-6.220;QD=41.55;ReadPosRankSum=-4.424;VQSLOD=2.7617;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:60.16:0,60,1059	0/0:7,0:7:21.05:0,21,367	0/1:15,0:9:1.31:1,0,5	0/0:14,0:12:11.86:0,12,154	1/1:6,20:28:57.16:1491,57,0	0/0:21,0:21:48.12:0,48,805	0/0:15,0:15:24.07:0,24,419	1/1:27,23:51:90.70:1881,91,0	0/0:12,0:12:27.09:0,27,507	1/1:2,16:20:57.14:1351,57,0	1/1:14,7:23:33.11:835,33,0	0/0:14,0:14:33.11:0,33,629	0/0:19,0:19:39.12:0,39,705	1/1:5,6:11:15.05:436,15,0	0/0:20,0:20:45.12:0,45,769	0/0:24,0:24:60.16:0,60,1029	1/1:12,16:29:45.15:1251,45,0	1/1:5,9:17:18.06:524,18,0	1/1:8,12:20:33.10:760,33,0	1/1:5,5:12:21.07:595,21,0	1/1:2,5:7:3.01:87,3,0	0/0:5,0:5:9.02:0,9,141	0/0:10,0:10:21.05:0,21,368	0/0:16,0:16:39.09:0,39,688	1/1:6,16:24:39.13:1123,39,0	1/1:9,15:26:53.91:1368,54,0	1/1:7,18:25:45.15:1236,45,0	1/1:1,15:16:18.06:524,18,0
chr10	49256798	.	C	CA	13123.32	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-15.145;DP=619;FS=5.739;HRun=2;HaplotypeScore=51.3237;InbreedingCoeff=0.9756;MQ=64.66;MQ0=14;MQRankSum=-0.860;QD=33.06;ReadPosRankSum=1.113;VQSLOD=4.4410;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,105,1247	0/0:12,0:12:33.09:0,33,393	0/0:19,0:12:33.03:0,33,349	0/0:14,0:8:9.06:0,9,194	1/1:4,19:23:60.09:790,60,0	1/1:1,22:24:60.20:863,60,0	1/1:3,20:23:42.14:604,42,0	1/1:1,22:22:63.14:814,63,0	1/1:1,13:14:30.10:432,30,0	1/1:2,22:24:66.21:933,66,0	1/1:0,16:16:44.98:566,45,0	0/0:20,0:20:54.17:0,54,667	0/0:17,0:17:48.11:0,48,556	1/1:1,29:29:69.23:986,69,0	0/0:24,0:24:66.19:0,66,804	1/1:1,13:14:27.09:389,27,0	1/1:0,16:16:42.14:604,42,0	1/1:0,22:22:54.18:777,54,0	1/1:2,17:18:48.04:583,48,0	1/1:5,26:28:78.15:1074,78,0	1/1:2,33:35:81.27:1166,81,0	0/0:34,0:34:87.24:0,87,1051	0/0:14,0:14:42.12:0,42,508	0/0:28,0:28:78.10:0,78,927	1/1:0,21:21:51.17:734,51,0	1/1:3,21:24:66.11:902,66,0	1/1:4,29:31:57.02:820,57,0	1/1:2,3:5:6.02:86,6,0
chr10	49257327	.	AACACACAC	A	872.01	PASS	AB=0.722;AC=18;AF=0.360;AN=50;BaseQRankSum=3.369;DP=556;FS=8.202;HRun=0;HaplotypeScore=160.2004;InbreedingCoeff=0.3251;MQ=65.45;MQ0=11;MQRankSum=-3.670;QD=4.13;ReadPosRankSum=-0.764;VQSLOD=2.1392;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:26,8:33:2.92:17,3,0	./.	./.	./.	0/1:9,0:15:13.26:13,0,220	1/1:12,5:17:3.01:47,3,0	1/1:21,0:21:5.51:60,6,0	0/0:18,0:18:4.79:0,5,26	1/1:7,4:13:9.50:172,10,0	0/0:20,0:20:18.88:0,19,312	0/0:5,0:7:3.01:0,3,59	0/1:7,9:17:33.03:67,0,33	0/1:16,5:21:28.62:265,0,29	0/0:18,0:19:9.01:0,9,146	0/1:16,8:25:21.41:121,0,21	1/1:8,7:16:12.04:244,12,0	0/0:26,0:34:3.73:0,4,305	0/0:19,0:22:36.10:0,36,1046	0/0:13,0:14:7.36:0,7,149	0/0:16,0:18:9.03:0,9,220	0/0:39,0:42:39.61:0,40,978	1/1:13,4:18:0.14:0,0,0	1/1:13,1:14:2.73:16,3,0	0/0:26,0:26:3.01:0,3,113	0/0:10,0:18:3.01:0,3,65	0/0:21,0:20:21.03:0,21,424	0/0:15,0:15:24.97:0,25,734	0/0:6,0:9:11.07:0,11,247
chr10	49258900	.	C	CA	19194.30	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-17.198;DP=830;FS=0.274;HRun=4;HaplotypeScore=74.8808;InbreedingCoeff=0.9999;MQ=89.41;MQ0=0;MQRankSum=-6.643;QD=35.15;ReadPosRankSum=4.906;VQSLOD=5.0754;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,53:56:99:1969,144,0	1/1:1,14:15:39.13:533,39,0	0/0:39,0:38:99:0,101,1114	0/0:31,0:31:79.07:0,79,846	1/1:3,32:35:96.23:1271,96,0	0/0:25,0:25:69.20:0,69,782	0/0:21,0:21:63.16:0,63,704	1/1:2,29:31:87.23:1131,87,0	0/0:25,0:25:69.18:0,69,772	1/1:1,27:28:78.26:1066,78,0	1/1:0,20:20:57.10:737,57,0	1/1:2,25:28:69.23:941,69,0	1/1:2,22:24:57.19:780,57,0	1/1:3,24:27:66.22:900,66,0	1/1:1,37:38:93.31:1272,93,0	1/1:4,28:32:41.21:951,41,0	1/1:0,35:35:99:1395,102,0	1/1:3,12:15:30.10:410,30,0	0/0:27,0:27:72.21:0,72,816	0/0:38,0:38:99:0,108,1213	0/0:37,0:37:99:0,108,1214	1/1:2,27:29:66.22:895,66,0	1/1:1,32:33:96.32:1311,96,0	1/1:0,37:37:96.32:1313,96,0	1/1:2,19:21:48.16:657,48,0	1/1:2,28:30:87.25:1168,87,0	0/0:41,0:40:99:0,120,1361	1/1:0,12:12:36.12:493,36,0
chr10	49259420	.	G	GC	255.07	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-2.935;DP=637;FS=4.596;HRun=9;HaplotypeScore=99.6416;InbreedingCoeff=0.6689;MQ=83.05;MQ0=1;MQRankSum=-0.670;QD=15.00;ReadPosRankSum=-1.383;VQSLOD=3.4971;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,123,1056	0/0:7,0:7:20.98:0,21,179	0/0:27,0:27:22:0,22,381	0/0:18,0:15:1.75:0,2,112	0/0:22,0:22:47.94:0,48,412	0/0:25,0:25:65.96:0,66,569	0/0:26,0:26:65.95:0,66,568	0/0:20,0:20:35.95:0,36,306	1/1:2,15:17:10.04:339,10,0	0/0:23,0:23:50.92:0,51,434	0/0:24,0:24:59.97:0,60,521	0/0:23,0:23:56.99:0,57,495	0/0:21,0:21:56.98:0,57,495	0/0:25,0:25:56.95:0,57,491	0/0:23,0:23:56.97:0,57,491	0/0:11,0:11:3.03:0,3,92	0/0:31,0:31:69.54:0,70,712	0/0:17,0:17:47.99:0,48,417	0/0:18,0:19:53.01:0,53,444	0/0:24,0:25:61.96:0,62,521	0/0:28,0:28:65.95:0,66,570	0/0:26,0:26:68.83:0,69,584	0/0:14,0:14:35.98:0,36,313	0/0:32,0:32:86.98:0,87,755	0/0:25,0:25:68.97:0,69,596	0/0:19,0:19:44.98:0,45,388	0/0:30,0:30:86.96:0,87,749	0/0:11,0:11:32.99:0,33,287
chr10	49261139	.	C	CTT	9100.38	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=-5.895;DP=690;FS=3.541;HRun=8;HaplotypeScore=82.9965;InbreedingCoeff=0.7760;MQ=67.39;MQ0=1;MQRankSum=-0.071;QD=27.92;ReadPosRankSum=1.143;VQSLOD=4.9374;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,126,1363	0/0:11,0:11:33.09:0,33,367	0/0:27,0:25:56.80:0,57,581	0/0:18,0:17:26.56:0,27,304	1/1:5,23:30:69.11:1002,69,0	0/1:18,0:18:37.85:184,0,38	0/1:27,0:27:62.64:254,0,63	1/1:17,11:28:64.30:918,64,0	0/1:30,0:30:92.98:283,0,93	1/1:4,26:31:77.59:1140,78,0	1/1:2,30:34:89.27:1319,89,0	0/0:24,0:24:63.09:0,63,675	0/0:27,0:28:75.12:0,75,880	1/1:2,25:26:66.01:1013,66,0	0/0:29,0:30:78.13:0,78,915	0/0:26,0:26:63.15:0,63,701	1/1:3,22:25:48.16:760,48,0	1/1:4,15:20:36.12:571,36,0	0/0:17,0:17:32.66:0,33,347	0/0:15,0:15:39.10:0,39,434	0/0:16,0:16:39.06:0,39,424	0/0:27,0:27:72.19:0,72,800	0/0:22,0:22:60.16:0,60,665	0/0:23,0:23:54.13:0,54,601	1/1:4,17:21:33.11:524,33,0	1/1:4,18:25:60.19:893,60,0	0/0:35,0:35:98.75:0,99,1077	1/1:2,8:10:15.05:238,15,0
chr10	49261145	.	T	TTTG	3507.77	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=9.895;DP=676;FS=1.039;HRun=0;HaplotypeScore=115.6413;InbreedingCoeff=0.4453;MQ=66.79;MQ0=1;MQRankSum=-0.818;QD=10.96;ReadPosRankSum=2.988;VQSLOD=3.4897;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:46:99:0,116,1581	0/0:13,0:13:33.08:0,33,436	0/0:25,0:24:33:0,33,409	0/0:17,0:16:18.78:0,19,326	0/1:27,0:27:23.99:63,0,24	1/1:5,12:17:36.12:729,36,0	1/1:6,17:24:48.16:952,48,0	0/1:28,0:28:66.99:67,0,75	1/1:6,26:32:57.20:1148,57,0	0/1:32,0:32:51.03:83,0,51	0/1:36,0:36:21.20:90,0,21	0/0:23,0:23:48.13:0,48,638	0/0:29,0:29:62.70:0,63,872	1/1:27,0:26:20.42:99,20,0	0/0:30,0:30:77.74:0,78,1071	0/0:25,0:25:66.20:0,66,900	0/1:24,0:24:1.92:53,0,2	1/1:18,0:18:2.67:46,3,0	0/0:13,0:14:27.05:0,27,348	0/0:13,0:13:36.11:0,36,499	0/0:16,0:16:39.10:0,39,506	0/0:26,0:26:66.21:0,66,917	0/0:23,0:23:59.21:0,59,806	0/0:22,0:22:57.12:0,57,761	0/1:25,0:25:30.05:30,0,69	0/1:22,0:22:10.17:119,0,10	0/0:34,0:34:93.23:0,93,1259	1/1:8,0:8:10.19:29,10,0
chr10	49262071	.	A	AG	29419.28	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-7.991;DP=793;FS=9.935;HRun=2;HaplotypeScore=66.3838;InbreedingCoeff=0.9998;MQ=81.33;MQ0=0;MQRankSum=-9.557;QD=39.23;ReadPosRankSum=5.093;VQSLOD=4.7553;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,53:57:99:2160,151,0	1/1:1,14:15:33.11:475,33,0	0/0:21,0:21:54.13:0,54,649	0/0:22,0:20:41.14:0,41,510	1/1:3,22:25:63.21:905,63,0	1/1:0,19:19:57.19:821,57,0	1/1:1,26:27:75.25:1080,75,0	1/1:1,35:36:99:1507,105,0	1/1:1,15:16:42.14:603,42,0	1/1:2,20:22:60.18:844,60,0	1/1:0,23:23:69.23:994,69,0	1/1:0,33:33:96.32:1383,96,0	1/1:0,32:32:81.27:1159,81,0	1/1:3,36:39:99:1554,108,0	1/1:1,35:36:99:1540,108,0	1/1:1,31:32:87.29:1252,87,0	1/1:0,29:29:84.28:1210,84,0	1/1:1,25:26:72.24:1033,72,0	1/1:1,17:18:51.15:713,51,0	1/1:0,15:15:45.11:625,45,0	1/1:4,47:51:99:1894,132,0	1/1:1,18:19:51.17:734,51,0	1/1:1,26:27:72.10:1037,72,0	1/1:0,34:34:96.32:1383,96,0	1/1:3,36:39:99:1468,102,0	1/1:0,37:37:99:1578,111,0	1/1:3,21:24:51.17:734,51,0	1/1:0,19:19:51.17:734,51,0
chr10	49262517	.	CT	C	459.34	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.946;DP=774;FS=3.458;HRun=4;HaplotypeScore=78.6484;InbreedingCoeff=0.9993;MQ=82.10;MQ0=0;MQRankSum=-1.972;QD=22.97;ReadPosRankSum=0.530;VQSLOD=2.6448;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,108,1512	0/0:14,0:14:42.14:0,42,585	0/0:28,0:28:78.24:0,78,1050	0/0:15,0:15:30.10:0,30,420	0/0:36,0:36:99:0,105,1469	0/0:30,0:30:90.30:0,90,1259	0/0:26,0:26:72.24:0,72,1005	0/0:43,0:43:99:0,117,1564	0/0:27,0:27:81.25:0,81,1102	0/0:39,0:39:99:0,117,1623	0/0:21,0:21:60.14:0,60,792	0/0:30,0:30:87.29:0,87,1217	0/0:31,0:31:87.29:0,87,1217	0/0:28,0:28:81.27:0,81,1134	0/0:41,0:41:99:0,120,1662	1/1:1,19:20:47.98:554,48,0	0/0:25,0:25:75.25:0,75,1050	0/0:20,0:20:57.16:0,57,769	0/0:13,0:13:36.12:0,36,503	0/0:26,0:26:75.24:0,75,1031	0/0:25,0:25:69.22:0,69,949	0/0:31,0:31:93.28:0,93,1268	0/0:31,0:31:93.28:0,93,1267	0/0:24,0:24:69.23:0,69,965	0/0:23,0:23:63.21:0,63,882	0/0:31,0:31:87.29:0,87,1216	0/0:26,0:26:78.26:0,78,1090	0/0:34,0:34:99:0,99,1333
chr10	49264126	.	G	GC	3801.05	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=18.353;DP=608;FS=0.738;HRun=1;HaplotypeScore=212.3596;InbreedingCoeff=0.9504;MQ=46.56;MQ0=8;MQRankSum=-17.345;QD=11.66;ReadPosRankSum=0.054;VQSLOD=2.0070;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,114,1450	0/0:13,0:13:36.12:0,36,467	0/0:38,0:17:51.12:0,51,613	0/0:24,0:8:18.05:0,18,221	1/1:31,0:30:43.47:287,43,0	1/1:17,0:17:26.01:174,26,0	1/1:8,0:8:11.39:66,11,0	1/1:23,0:23:60.12:357,60,0	1/1:21,0:21:37.30:197,37,0	1/1:22,1:23:66.41:368,66,0	1/1:19,1:20:28.72:178,29,0	0/0:35,0:35:99:0,99,1285	0/0:24,0:24:72.23:0,72,935	1/1:22,0:22:36.78:180,37,0	0/0:19,0:19:57.19:0,57,740	0/0:25,0:25:75.23:0,75,960	1/1:6,1:7:14.43:86,14,0	1/1:16,0:16:42.48:216,42,0	1/1:26,0:23:60.16:318,60,0	1/1:18,1:19:46.25:264,46,0	1/1:9,0:9:5.67:28,6,0	0/0:24,0:24:69.21:0,69,882	0/0:24,0:24:72.22:0,72,921	0/0:16,0:16:45.15:0,45,584	1/1:18,1:19:43.28:256,43,0	1/1:30,0:30:77.89:459,78,0	1/1:34,0:34:70.91:353,71,0	1/1:1,0:1:2.84:14,3,0
chr10	49264127	.	CAGTG	C	12785.31	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=17.650;DP=575;FS=1.609;HRun=0;HaplotypeScore=187.5693;InbreedingCoeff=0.9552;MQ=47.45;MQ0=9;MQRankSum=-16.560;QD=44.55;ReadPosRankSum=1.208;VQSLOD=5.4369;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,120,3412	0/0:13,0:13:36.12:0,36,1043	0/0:39,0:17:51.13:0,51,1184	0/0:25,0:9:24.08:0,24,562	1/1:2,22:23:33.10:651,33,0	1/1:0,14:14:18.06:375,18,0	1/1:0,6:7:14.81:212,15,0	1/1:1,17:19:54.12:1081,54,0	1/1:0,20:20:41.99:787,42,0	1/1:1,17:18:54.19:1109,54,0	1/1:1,17:18:26.98:499,27,0	0/0:35,0:35:99:0,99,2831	0/0:24,0:24:72.25:0,72,2081	1/1:0,22:22:42.06:827,42,0	0/0:19,0:19:57.20:0,57,1652	0/0:26,0:26:78.27:0,78,2235	1/1:1,6:7:17.95:313,18,0	1/1:0,12:12:36.12:751,36,0	1/1:6,17:21:54.19:1111,54,0	1/1:1,16:17:45.05:876,45,0	1/1:1,7:8:6.02:125,6,0	0/0:24,0:24:69.24:0,69,1985	0/0:25,0:25:75.24:0,75,2056	0/0:17,0:17:45.15:0,45,1289	1/1:1,17:18:42.14:850,42,0	1/1:4,24:28:83.95:1621,84,0	1/1:0,30:30:78.10:1534,78,0	1/1:0,1:1:3.01:62,3,0
chr10	49264135	.	AT	A	8190.78	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=18.301;DP=573;FS=4.755;HRun=1;HaplotypeScore=176.0017;InbreedingCoeff=0.9632;MQ=51.11;MQ0=7;MQRankSum=-17.138;QD=28.84;ReadPosRankSum=-0.880;VQSLOD=4.2089;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,126,2013	0/0:14,0:14:39.13:0,39,623	0/0:34,0:16:41.71:0,42,579	0/0:24,0:10:26.17:0,26,353	1/1:0,22:22:33.05:388,33,0	1/1:0,14:14:33.10:400,33,0	1/1:0,6:7:14.99:159,15,0	1/1:3,17:20:54.16:654,54,0	1/1:0,20:20:42.13:513,42,0	1/1:0,17:17:51.16:627,51,0	1/1:1,17:18:35.98:387,36,0	0/0:34,0:34:99:0,99,1580	0/0:27,0:27:81.28:0,81,1295	1/1:1,22:23:48.12:568,48,0	0/0:22,0:22:66.23:0,66,1055	0/0:24,0:24:72.25:0,72,1149	1/1:1,6:7:18.06:217,18,0	1/1:1,12:13:39.08:463,39,0	1/1:5,17:19:54.13:648,54,0	1/1:0,16:16:42.13:514,42,0	1/1:1,8:9:9.03:111,9,0	0/0:24,0:24:69.22:0,69,1080	0/0:24,0:24:72.25:0,72,1151	0/0:19,0:19:48.16:0,48,767	1/1:0,17:18:45.09:525,45,0	1/1:1,25:26:78.24:956,78,0	1/1:2,29:31:84.26:1025,84,0	1/1:0,1:1:3.01:37,3,0
chr10	49264574	.	A	ACAGAGCC	36267.41	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-9.756;DP=689;FS=19.965;HRun=0;HaplotypeScore=142.2116;InbreedingCoeff=0.9988;MQ=76.96;MQ0=0;MQRankSum=-19.354;QD=90.67;ReadPosRankSum=-1.508;VQSLOD=4.1850;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,151,3803	0/0:15,0:15:42.14:0,42,1090	0/0:23,0:24:57.16:0,57,1314	0/0:21,0:23:47.57:0,48,1034	1/1:5,18:26:60.16:2280,60,0	1/1:4,15:21:51.18:1998,51,0	1/1:9,14:27:66.23:2579,66,0	1/1:21,11:34:87.28:2982,87,0	1/1:6,16:24:57.20:2255,57,0	1/1:5,15:21:54.16:1949,54,0	1/1:4,19:25:57.20:2193,57,0	0/0:28,0:28:78.27:0,78,1991	0/0:36,0:36:99:0,105,2698	1/1:6,11:20:48.14:1731,48,0	0/0:38,0:38:99:0,108,2706	1/1:9,17:27:75.17:2682,75,0	1/1:5,17:23:45.15:1744,45,0	1/1:3,7:11:24.08:957,24,0	1/1:8,8:17:45.15:1562,45,0	1/1:5,16:22:54.19:2127,54,0	1/1:5,13:20:24.08:937,24,0	0/0:20,0:20:54.17:0,54,1316	0/0:20,0:20:50.62:0,51,1364	0/0:32,0:32:90.27:0,90,2165	1/1:5,15:21:51.18:1970,51,0	1/1:8,23:34:96.31:3598,96,0	1/1:4,14:18:48.16:1886,48,0	1/1:2,7:9:21.07:838,21,0
chr10	49264754	.	A	ATTGTTGTTGTTG	16974.35	PASS	AB=0.727;AC=35;AF=0.625;AN=56;BaseQRankSum=2.509;DP=866;FS=3.370;HRun=0;HaplotypeScore=258.7753;InbreedingCoeff=0.8738;MQ=64.87;MQ0=3;MQRankSum=-10.975;QD=33.81;ReadPosRankSum=-5.674;VQSLOD=3.1405;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,129,3911	0/0:15,0:15:36.12:0,36,1198	0/0:36,0:30:28.75:0,29,672	0/0:29,0:28:33.11:0,33,894	1/1:17,0:26:9.03:252,9,0	1/1:6,7:21:15.05:881,15,0	1/1:17,6:27:15.05:881,15,0	1/1:46,0:43:78.26:2631,78,0	1/1:11,11:26:33.11:1938,33,0	1/1:15,0:33:42.12:1414,42,0	1/1:11,0:22:12.04:555,12,0	0/0:39,0:39:96.33:0,96,3122	0/0:41,0:43:90.27:0,90,2693	1/1:15,0:24:6.02:314,6,0	0/0:46,0:46:99:0,120,3838	1/1:15,15:38:36.12:2114,36,0	1/1:10,0:18:9.03:385,9,0	1/1:15,0:23:9.03:314,9,0	1/1:15,9:24:33.11:1377,33,0	1/1:21,0:36:24.04:552,24,0	0/1:25,0:39:5.85:384,0,6	0/0:20,0:20:42.14:0,42,1382	0/0:31,0:31:60.19:0,60,1882	0/0:50,0:50:99:0,117,3858	1/1:11,0:29:7.58:318,8,0	1/1:19,0:34:38.86:1460,39,0	1/1:6,0:21:18.06:581,18,0	1/1:6,0:13:12.04:625,12,0
chr10	49265367	.	G	GAC	4282.29	PASS	AB=0.705;AC=44;AF=0.786;AN=56;BaseQRankSum=3.175;DP=731;FS=0.000;HRun=0;HaplotypeScore=164.3021;InbreedingCoeff=0.1973;MQ=61.00;MQ0=0;MQRankSum=-2.343;QD=6.49;ReadPosRankSum=-1.887;VQSLOD=4.2319;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:28,19:50:52.80:412,0,53	0/1:5,4:10:59.88:160,0,60	0/0:30,0:24:6:0,6,56	0/0:28,0:20:2.98:0,3,22	1/1:26,0:26:17.20:65,17,0	1/1:19,0:18:8.70:155,9,0	1/1:35,0:34:42.69:290,43,0	1/1:24,0:24:5.48:24,5,0	1/1:25,0:25:29.06:184,29,0	1/1:23,0:23:18.36:92,18,0	1/1:16,0:16:5:16,5,0	0/1:21,20:45:2.38:544,0,2	0/1:14,9:25:26.62:236,0,27	1/1:38,0:38:35.44:145,35,0	0/1:26,10:38:61.73:284,0,62	1/1:28,0:28:29.97:250,30,0	1/1:16,0:16:17.97:84,18,0	1/1:15,0:15:15.74:104,16,0	1/1:23,0:23:16.81:123,17,0	1/1:19,0:19:14.79:156,15,0	1/1:35,0:34:5.98:46,6,0	1/1:14,12:27:1.04:168,1,0	0/0:13,0:13:9.02:0,9,100	0/1:24,16:41:99:396,0,139	1/1:29,0:29:14.95:103,15,0	1/1:30,0:30:19.84:71,20,0	1/1:17,0:17:27.45:168,27,0	1/1:5,0:5:2.22:7,2,0
chr10	49265388	.	A	ACCCC	8504.75	PASS	AB=0.889;AC=32;AF=0.571;AN=56;BaseQRankSum=11.610;DP=758;FS=1.136;HRun=1;HaplotypeScore=165.7574;InbreedingCoeff=0.6144;MQ=52.69;MQ0=4;MQRankSum=-10.252;QD=18.90;ReadPosRankSum=3.430;VQSLOD=1.7187;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:57:99:0,120,1582	0/0:11,0:11:26.91:0,27,331	0/0:27,0:15:30.10:0,30,517	0/0:31,0:19:50.96:0,51,854	1/1:22,0:23:32.99:422,33,0	1/1:15,10:26:17.83:507,18,0	1/1:34,1:35:32.55:1156,33,0	1/1:25,0:25:24.57:658,25,0	1/1:13,14:30:37.01:651,37,0	0/1:21,0:21:20.04:342,0,20	1/1:15,0:15:6.02:83,6,0	0/0:46,0:44:86.79:0,87,1015	0/0:23,0:23:50.94:0,51,648	1/1:34,0:35:22.81:579,23,0	0/0:31,0:31:74.99:0,75,1002	0/1:36,0:36:63.45:104,0,63	1/1:14,1:15:0.13:311,0,0	1/1:16,0:16:9.67:289,10,0	1/1:12,14:28:9.83:841,10,0	1/1:11,14:25:41.90:740,42,0	0/1:8,16:38:15.06:107,0,15	0/0:30,0:30:50.52:0,51,691	0/0:15,0:15:24.08:0,24,422	0/0:37,0:37:59.29:0,59,1051	1/1:23,2:26:6.85:509,7,0	0/1:27,0:27:14.66:561,0,15	1/1:8,7:19:30.10:605,30,0	1/1:5,0:5:3.01:41,3,0
chr10	49265390	.	A	ACCCCCC	13483.02	PASS	AB=0.685;AC=32;AF=0.571;AN=56;BaseQRankSum=5.742;DP=787;FS=0.000;HRun=1;HaplotypeScore=179.9242;InbreedingCoeff=0.6617;MQ=54.58;MQ0=4;MQRankSum=-8.949;QD=28.03;ReadPosRankSum=0.877;VQSLOD=1.2106;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:57:99:0,114,2022	0/0:11,0:11:27.07:0,27,439	0/0:27,0:15:27.09:0,27,617	0/0:29,0:18:51.17:0,51,1134	1/1:3,15:27:38.48:846,38,0	0/1:21,0:26:39.55:534,0,40	0/1:29,0:37:64.89:1091,0,65	1/1:8,17:31:70.36:1337,70,0	1/1:20,0:31:42.09:866,42,0	1/1:3,11:24:22.36:873,22,0	1/1:0,12:16:5.64:169,6,0	0/0:47,0:45:87.46:0,87,1376	0/0:23,0:23:54.16:0,54,943	1/1:4,30:38:47.65:1458,48,0	0/0:32,0:32:74.69:0,75,1360	0/1:5,0:38:34.69:436,0,35	1/1:3,11:18:21.07:593,21,0	0/1:4,10:15:18.66:514,0,19	1/1:26,0:29:43.85:669,44,0	1/1:17,0:24:43.71:712,44,0	1/1:33,0:35:8.97:131,9,0	0/0:28,0:28:47.22:0,47,911	0/0:16,0:16:27.08:0,27,581	0/0:36,0:36:80.50:0,80,1491	1/1:7,17:28:30.07:884,30,0	1/1:5,15:30:64.97:1588,65,0	1/1:11,0:19:30.09:674,30,0	1/1:1,4:10:3.01:110,3,0
chr10	49265402	.	A	ACC	7702.25	PASS	AB=1.000;AC=42;AF=0.750;AN=56;BaseQRankSum=11.039;DP=757;FS=3.797;HRun=4;HaplotypeScore=161.3820;InbreedingCoeff=0.2170;MQ=64.02;MQ0=4;MQRankSum=-6.485;QD=11.24;ReadPosRankSum=-0.687;VQSLOD=0.9959;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:52,0:52:99:115,0,490	0/1:10,0:10:60.62:63,0,61	0/0:27,0:19:56.77:0,57,512	0/0:26,0:20:43.91:0,44,418	1/1:23,0:23:37.93:328,38,0	1/1:25,4:28:46.98:481,47,0	1/1:35,7:42:95.68:936,96,0	1/1:29,0:29:75.02:668,75,0	1/1:21,7:28:42.50:474,42,0	1/1:23,0:23:43.96:389,44,0	1/1:13,0:13:18.54:116,19,0	0/1:49,0:47:99:221,0,266	0/1:25,0:25:69.29:69,0,232	1/1:34,0:34:53.82:487,54,0	0/1:28,0:28:94.80:95,0,302	0/1:38,0:38:42.59:43,0,102	1/1:17,0:17:32.44:274,32,0	1/1:13,0:13:23.98:245,24,0	1/1:27,3:29:77.15:648,77,0	1/1:19,5:25:44.43:452,44,0	1/1:33,3:34:19.99:168,20,0	0/1:26,0:26:34.99:35,0,241	0/0:18,0:18:32.85:0,33,288	0/1:38,0:38:99:114,0,395	1/1:24,0:24:35.38:323,35,0	1/1:25,0:25:56.88:491,57,0	1/1:15,5:20:40.78:436,41,0	1/1:8,0:8:3:29,3,0
chr10	49267244	.	GTT	G	976.87	PASS	AB=0.564;AC=5;AF=0.089;AN=56;BaseQRankSum=10.415;DP=801;FS=4.063;HRun=3;HaplotypeScore=164.1140;InbreedingCoeff=0.7803;MQ=71.00;MQ0=0;MQRankSum=-10.189;QD=15.26;ReadPosRankSum=-0.032;VQSLOD=0.6126;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,132,2440	0/0:12,0:12:36.12:0,36,695	0/0:24,0:23:63.07:0,63,1084	0/0:33,0:30:79.86:0,80,1330	0/0:31,0:31:90.22:0,90,1558	1/1:6,17:23:35.91:452,36,0	0/1:5,17:22:76.04:266,0,76	0/0:36,0:36:99:0,108,1856	1/1:7,12:19:50.35:389,50,0	0/0:32,0:32:81.24:0,81,1635	0/0:23,0:23:69.16:0,69,1225	0/0:34,0:34:99:0,102,1838	0/0:41,0:41:99:0,123,2283	0/0:26,0:26:75.21:0,75,1402	0/0:36,0:36:99:0,102,1939	0/0:27,0:27:81.24:0,81,1514	0/0:27,0:27:72.16:0,72,1306	0/0:29,0:29:81.24:0,81,1489	0/0:26,0:26:78.14:0,78,1367	0/0:22,0:22:66.16:0,66,1193	0/0:45,0:45:99:0,132,2464	0/0:27,0:27:78.26:0,78,1477	0/0:27,0:27:81.27:0,81,1501	0/0:29,0:29:84.29:0,84,1586	0/0:26,0:25:75.15:0,75,1319	0/0:38,0:38:99:0,114,2119	0/0:25,0:25:75.21:0,75,1410	0/0:17,0:17:51.15:0,51,950
chr10	49267248	.	GTA	G	936.95	PASS	AB=0.564;AC=5;AF=0.089;AN=56;BaseQRankSum=9.893;DP=817;FS=5.560;HRun=0;HaplotypeScore=170.1274;InbreedingCoeff=0.7800;MQ=72.86;MQ0=0;MQRankSum=-9.139;QD=14.64;ReadPosRankSum=-1.841;VQSLOD=2.8597;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,132,2502	0/0:13,0:13:39.12:0,39,713	0/0:24,0:23:44.21:0,44,1065	0/0:32,1:31:82.42:0,82,1297	0/0:30,0:30:87.13:0,87,875	1/1:5,17:22:35.25:434,35,0	0/1:5,17:22:74.70:264,0,75	0/0:35,0:35:92.82:0,93,881	1/1:8,12:20:47.88:369,48,0	0/0:34,0:34:96.16:0,96,842	0/0:25,0:25:66.54:0,67,676	0/0:35,0:35:99:0,105,2006	0/0:42,0:42:99:0,126,2342	0/0:26,0:26:72.12:0,72,813	0/0:37,0:37:99:0,108,2007	0/0:27,0:27:78.07:0,78,785	0/0:28,0:28:28.04:0,28,674	0/0:32,0:32:59.11:0,59,772	0/0:26,0:26:71.49:0,71,670	0/0:23,0:23:62.99:0,63,606	0/0:49,0:49:66.33:0,66,1230	0/0:27,0:27:81.28:0,81,1542	0/0:27,0:27:81.28:0,81,1526	0/0:31,0:31:90.25:0,90,1604	0/0:23,0:23:63.04:0,63,606	0/0:40,0:40:99:0,114,1099	0/0:25,0:25:71.02:0,71,789	0/0:17,0:17:51.10:0,51,529
chr10	49267361	.	G	GGCTTTATACTGGGTGCCT	91889.14	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=2.784;DP=851;FS=7.483;HRun=0;HaplotypeScore=366.0887;InbreedingCoeff=0.9996;MQ=74.56;MQ0=0;MQRankSum=-21.194;QD=169.54;ReadPosRankSum=-2.426;VQSLOD=3.8434;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,147,6727	0/0:13,0:13:39.13:0,39,1849	0/0:35,0:35:99:0,99,3691	0/0:14,0:14:36.12:0,36,1258	1/1:25,9:38:84.12:5183,84,0	1/1:18,9:28:78.05:4866,78,0	1/1:17,1:21:48.12:3024,48,0	1/1:41,0:41:99:6326,111,0	1/1:19,12:36:78.22:5114,78,0	1/1:28,11:46:99:7251,126,0	1/1:11,10:22:57.15:4124,57,0	0/0:31,0:31:90.30:0,90,4305	0/0:42,0:42:99:0,114,5460	1/1:22,16:43:99:7903,117,0	0/0:41,0:41:99:0,120,5472	1/1:23,11:35:96.29:7124,96,0	1/1:12,4:18:42.14:3296,42,0	1/1:14,6:20:54.19:4067,54,0	1/1:13,3:20:57.19:3094,57,0	1/1:16,13:34:93.15:5180,93,0	1/1:16,0:16:24:1449,24,0	0/0:26,0:26:78.24:0,78,3588	0/0:21,0:21:63.21:0,63,2961	0/0:33,0:33:90.30:0,90,4077	1/1:22,8:31:81.15:5356,81,0	1/1:28,14:44:99:9045,123,0	1/1:26,10:38:99:7545,102,0	1/1:6,4:10:30.07:1941,30,0
chr10	49268410	.	CGTGTGTGT	C	1960.88	PASS	AB=0.977;AC=20;AF=0.357;AN=56;BaseQRankSum=-0.962;DP=521;FS=24.322;HRun=0;HaplotypeScore=161.7500;InbreedingCoeff=0.2344;MQ=60.63;MQ0=11;MQRankSum=0.588;QD=8.00;ReadPosRankSum=2.138;VQSLOD=1.2059;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:14:20.88:411,21,0	1/1:2,6:8:6.02:82,6,0	0/0:25,0:15:11.97:0,12,312	0/0:17,0:13:10.48:0,10,180	0/1:22,0:21:22.78:23,0,55	0/1:16,0:16:10.69:11,0,201	0/0:26,0:25:1.18:0,1,524	0/0:24,0:30:22.19:0,22,262	0/0:18,0:17:12.09:0,12,377	0/1:23,0:23:45.07:45,0,63	0/1:13,0:13:6.97:7,0,187	0/0:5,12:16:0.47:0,0,1	1/1:7,8:16:13.31:298,13,0	0/1:13,0:14:41.27:69,0,41	0/0:1,9:10:0:0,0,0	0/0:25,0:24:15.51:0,16,367	0/0:19,0:18:10.07:0,10,118	0/1:25,0:25:83.98:84,0,134	0/0:18,0:17:36.12:0,36,953	0/0:18,0:18:20.63:0,21,516	0/0:22,0:20:9.88:0,10,222	1/1:15,1:15:11.62:293,12,0	1/1:16,1:18:1.30:389,1,0	1/1:15,1:16:17.92:360,18,0	0/1:15,0:15:44.12:44,0,62	0/1:25,0:26:19.15:19,0,315	0/0:24,0:24:38.13:0,38,970	0/0:6,0:6:6.49:0,6,90
chr10	49268451	.	GAGAGAGAGAGAGAGAGAA	G	1683.48	PASS	AB=1.000;AC=33;AF=0.635;AN=52;BaseQRankSum=-0.889;DP=452;FS=0.000;HRun=0;HaplotypeScore=165.0840;InbreedingCoeff=-0.0312;MQ=44.22;MQ0=22;MQRankSum=0.642;QD=4.43;ReadPosRankSum=4.051;VQSLOD=2.3459;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:18,0:15:26.14:26,0,128	0/1:10,0:10:3.79:4,0,27	./.	./.	1/1:14,0:13:3.48:44,3,0	1/1:4,14:18:5.42:29,5,0	1/1:23,0:21:11.18:78,11,0	0/1:17,0:14:4.91:45,0,5	1/1:34,0:30:8.98:305,9,0	0/1:16,0:12:39.25:39,0,74	1/1:10,0:9:4.30:16,4,0	0/0:14,0:12:7.13:0,7,25	0/0:17,0:16:5.73:0,6,62	1/1:14,0:13:0.44:76,0,0	0/0:18,0:17:12.34:0,12,52	1/1:7,17:24:4.40:34,4,0	0/0:21,0:19:2.97:0,3,21	0/1:21,0:19:8.91:137,0,9	0/1:8,0:6:0.78:49,0,1	1/1:19,1:20:2.61:18,3,0	1/1:10,0:9:3:25,3,0	0/1:14,0:12:14.01:25,0,14	0/1:16,0:16:3.95:4,0,227	0/1:19,0:15:10.56:11,0,355	1/1:26,0:25:6.19:95,6,0	0/1:26,0:26:73.85:332,0,74	1/1:17,0:17:15.27:415,15,0	0/1:5,0:4:18.30:25,0,18
chr10	49268453	.	GAGAGAGAGAGAGAGAA	G	1926.97	PASS	AB=0.996;AC=36;AF=0.692;AN=52;BaseQRankSum=-2.704;DP=449;FS=1.889;HRun=0;HaplotypeScore=160.6091;InbreedingCoeff=0.0201;MQ=44.28;MQ0=22;MQRankSum=1.417;QD=4.82;ReadPosRankSum=4.662;VQSLOD=2.6031;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:18,0:15:26.14:26,0,102	0/1:9,0:9:6:6,0,19	./.	./.	1/1:14,0:13:3.48:54,3,0	1/1:18,0:18:5.42:29,5,0	1/1:22,0:20:11.75:83,12,0	0/1:17,0:14:1.74:48,0,2	1/1:10,23:29:8.98:271,9,0	0/1:16,0:12:17.35:74,0,17	1/1:10,0:9:4.30:16,4,0	0/0:14,0:12:7.13:0,7,25	0/0:17,0:16:2.12:0,2,27	0/1:16,0:15:33.22:84,0,33	0/0:18,0:17:15.51:0,16,103	1/1:24,0:24:4.40:34,4,0	1/1:22,0:20:0.89:2,1,0	0/1:21,0:19:5.93:151,0,6	1/1:8,0:6:11.88:81,12,0	1/1:5,15:20:2.68:18,3,0	1/1:10,0:9:3:25,3,0	0/1:14,0:12:13.64:25,0,14	0/1:15,0:15:3.95:4,0,202	0/1:20,0:15:10.56:11,0,306	1/1:26,0:25:7.72:111,8,0	0/1:24,1:25:2.35:437,0,2	1/1:16,1:17:19.78:407,20,0	1/1:5,0:4:7.39:78,7,0
chr10	49268455	.	GAGAGAGAGAGAGAA	G	2286.94	PASS	AB=0.952;AC=40;AF=0.769;AN=52;BaseQRankSum=-4.828;DP=455;FS=9.856;HRun=0;HaplotypeScore=154.4418;InbreedingCoeff=0.0223;MQ=44.35;MQ0=22;MQRankSum=2.939;QD=5.37;ReadPosRankSum=4.590;VQSLOD=2.0716;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:19,0:16:26.14:26,0,77	0/1:10,0:10:10.48:10,0,18	./.	./.	1/1:4,10:13:3.48:65,3,0	1/1:18,0:18:5.41:29,5,0	1/1:21,0:19:12.08:85,12,0	1/1:19,0:16:17.20:97,17,0	1/1:33,0:29:8.98:232,9,0	1/1:16,0:12:10.40:105,10,0	1/1:4,6:9:4.30:16,4,0	0/0:14,0:12:6.53:0,7,23	0/1:17,0:16:12.20:12,0,14	0/1:18,0:17:5.01:110,0,5	0/0:15,0:14:14.98:0,15,76	1/1:23,0:23:4.40:34,4,0	1/1:22,0:20:2.99:24,3,0	0/1:8,13:19:4.22:117,0,4	1/1:8,0:6:11.88:81,12,0	1/1:20,0:20:2.68:18,3,0	1/1:10,0:9:3:25,3,0	0/1:14,0:12:13.35:26,0,13	0/1:15,0:15:24.65:25,0,175	0/1:23,0:18:33.60:34,0,254	1/1:26,0:25:19.47:148,19,0	1/1:27,0:27:50.67:595,51,0	1/1:17,0:17:31.07:402,31,0	1/1:5,0:4:11.93:118,12,0
chr10	49268457	.	GAGAGAGAGAGAA	G	2457.66	PASS	AB=1.000;AC=42;AF=0.808;AN=52;BaseQRankSum=-6.116;DP=449;FS=12.739;HRun=0;HaplotypeScore=141.9191;InbreedingCoeff=-0.0653;MQ=44.22;MQ0=22;MQRankSum=2.213;QD=5.68;ReadPosRankSum=4.609;VQSLOD=1.9036;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:20,0:17:48.09:48,0,53	0/1:9,0:9:12.73:27,0,13	./.	./.	1/1:13,0:12:3.48:40,3,0	1/1:18,0:18:5.55:29,6,0	1/1:21,0:19:12.20:86,12,0	1/1:19,0:16:19.49:119,19,0	1/1:31,0:27:8.98:200,9,0	1/1:9,6:11:13.97:135,14,0	1/1:10,0:9:4.30:16,4,0	0/1:15,0:13:13.13:16,0,13	0/1:17,0:16:6.12:27,0,6	1/1:17,2:18:19.94:152,20,0	0/0:16,0:15:12.85:0,13,50	1/1:22,0:22:4.54:34,5,0	1/1:22,0:20:2.99:24,3,0	0/1:19,0:17:3.15:69,0,3	1/1:7,0:5:11.88:81,12,0	1/1:20,0:20:2.68:18,3,0	1/1:10,0:9:5.99:50,6,0	0/1:14,0:12:12.97:26,0,13	0/1:15,0:15:24.65:25,0,150	0/1:23,0:18:76.87:77,0,205	1/1:24,1:24:19.47:148,19,0	1/1:10,17:27:60.29:661,60,0	1/1:17,0:17:35.60:390,36,0	1/1:5,0:4:11.95:100,12,0
chr10	49268459	.	GAGAGAGAGAA	G	2474.13	PASS	AB=1.000;AC=44;AF=0.846;AN=52;BaseQRankSum=-6.850;DP=440;FS=18.617;HRun=0;HaplotypeScore=129.8030;InbreedingCoeff=-0.2178;MQ=44.04;MQ0=24;MQRankSum=2.636;QD=5.64;ReadPosRankSum=5.081;VQSLOD=0.8032;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:19,0:16:43.65:48,0,44	0/1:10,0:10:9.48:50,0,9	./.	./.	1/1:13,0:12:3.47:27,3,0	1/1:18,0:18:5.68:29,6,0	1/1:19,0:17:12.44:88,12,0	1/1:18,0:15:19.56:122,20,0	1/1:30,0:26:8.98:171,9,0	1/1:14,0:10:14.26:114,14,0	1/1:11,0:9:4.30:16,4,0	0/1:14,0:12:8.68:17,0,9	1/1:17,0:16:6.83:38,7,0	1/1:19,0:18:23.18:184,23,0	0/1:17,0:16:26.08:52,0,26	1/1:22,0:22:4.71:34,5,0	1/1:2,19:19:2.99:24,3,0	0/1:19,0:17:2.17:58,0,2	1/1:9,0:6:14.88:109,15,0	1/1:19,0:19:2.94:18,3,0	1/1:9,0:8:5.99:50,6,0	0/1:15,0:13:8.73:48,0,9	0/1:15,0:15:24.91:25,0,125	0/1:20,0:15:77.17:77,0,163	1/1:23,1:23:19.47:148,19,0	1/1:26,0:26:60.66:609,61,0	1/1:16,0:16:35.67:359,36,0	1/1:5,0:4:11.89:85,12,0
chr10	49269047	.	CTT	C	8543.99	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=12.517;DP=578;FS=4.833;HRun=12;HaplotypeScore=106.6196;InbreedingCoeff=0.9536;MQ=71.96;MQ0=0;MQRankSum=0.066;QD=23.03;ReadPosRankSum=2.366;VQSLOD=4.5873;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:27:71.65:0,72,952	0/0:14,0:14:42.13:0,42,604	0/0:20,0:15:20.67:0,21,213	0/0:10,0:8:9.02:0,9,105	1/1:3,26:30:82.29:802,82,0	1/1:1,21:22:60.13:610,60,0	1/1:4,13:18:23.75:296,24,0	1/1:7,14:22:41.79:400,42,0	1/1:5,15:20:35.91:366,36,0	1/1:5,20:25:57.05:580,57,0	1/1:5,22:27:54.04:547,54,0	0/0:23,0:23:60.18:0,60,861	0/0:18,0:21:53.65:0,54,713	1/1:4,9:13:27.01:275,27,0	0/0:20,0:19:51.17:0,51,760	0/0:4,1:16:0.32:0,0,82	1/1:2,24:26:57.10:580,57,0	1/1:4,16:20:36.03:366,36,0	1/1:4,11:17:38.53:359,39,0	1/1:1,17:18:51.03:505,51,0	1/1:3,13:16:39.07:397,39,0	0/0:18,0:18:48.12:0,48,691	0/0:25,0:25:38.77:0,39,954	0/0:11,0:12:29.59:0,30,411	1/1:3,20:23:57.12:580,57,0	1/1:2,26:28:75.13:763,75,0	1/1:2,32:35:80.90:876,81,0	1/1:2,9:11:24.05:243,24,0
chr10	49269357	.	A	AAAAAAAC	1377.40	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-0.480;DP=620;FS=5.797;HRun=0;HaplotypeScore=169.2810;InbreedingCoeff=0.9779;MQ=65.95;MQ0=0;MQRankSum=-6.078;QD=68.87;ReadPosRankSum=1.089;VQSLOD=3.7330;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:69.16:0,69,1466	0/0:14,0:14:42.14:0,42,1023	0/0:14,0:14:35.75:0,36,475	0/0:7,0:7:18.94:0,19,385	0/0:35,0:35:99:0,102,2377	0/0:29,0:29:84.26:0,84,1826	0/0:18,0:18:48.16:0,48,1081	0/0:41,0:41:99:0,114,2514	0/0:22,0:22:66.21:0,66,1499	0/0:20,0:20:60.20:0,60,1319	0/0:19,0:19:57.17:0,57,1258	0/0:17,0:17:48.15:0,48,1047	0/0:15,0:15:45.15:0,45,1083	0/0:29,0:29:87.30:0,87,2093	0/0:21,0:21:60.19:0,60,1317	1/1:2,16:20:39.13:1472,39,0	0/0:27,0:27:75.25:0,75,1741	0/0:22,0:22:60.61:0,61,1359	0/0:20,0:20:48.16:0,48,1120	0/0:31,0:31:87.28:0,87,1990	0/0:15,0:15:42.13:0,42,927	0/0:21,0:21:60.20:0,60,1432	0/0:25,0:25:69.21:0,69,1572	0/0:16,0:16:44.64:0,45,1020	0/0:28,0:28:81.24:0,81,1728	0/0:30,0:30:87.29:0,87,2019	0/0:36,0:36:99:0,108,2441	0/0:5,0:5:15.05:0,15,346
chr10	49269493	.	C	CG	714.87	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.037;DP=636;FS=1.983;HRun=0;HaplotypeScore=67.9472;InbreedingCoeff=0.9958;MQ=81.92;MQ0=0;MQRankSum=-3.748;QD=37.62;ReadPosRankSum=0.685;VQSLOD=3.7166;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,132,1795	0/0:7,0:7:21.07:0,21,293	0/0:18,0:18:41.78:0,42,513	0/0:20,0:20:46.32:0,46,539	0/0:30,0:30:84.20:0,84,1102	0/0:16,0:16:48.16:0,48,671	0/0:17,0:17:45.15:0,45,629	0/0:36,0:36:99:0,99,1324	0/0:28,0:28:84.27:0,84,1156	0/0:27,0:27:81.26:0,81,1103	0/0:21,0:21:63.18:0,63,834	0/0:23,0:23:63.21:0,63,881	0/0:16,0:16:48.15:0,48,655	0/0:20,0:20:60.19:0,60,822	0/0:24,0:24:72.24:0,72,1007	1/1:0,19:19:51.17:810,51,0	0/0:34,0:34:99:0,99,1368	0/0:27,0:27:78.23:0,78,1057	0/0:22,0:22:60.17:0,60,791	0/0:25,0:25:75.25:0,75,1049	0/0:20,0:20:57.15:0,57,760	0/0:14,0:14:39.06:0,39,490	0/0:23,0:23:63.20:0,63,861	0/0:20,0:20:57.19:0,57,797	0/0:29,0:29:84.25:0,84,1128	0/0:14,0:14:42.13:0,42,571	0/0:23,0:23:69.22:0,69,940	0/0:19,0:19:57.19:0,57,796
chr10	49269799	.	T	TAAGC	6393.25	PASS	AB=0.998;AC=19;AF=0.339;AN=56;BaseQRankSum=1.635;DP=694;FS=2.576;HRun=0;HaplotypeScore=163.7906;InbreedingCoeff=-0.3244;MQ=64.08;MQ0=2;MQRankSum=-2.295;QD=14.11;ReadPosRankSum=-5.477;VQSLOD=3.1277;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:36,0:36:83.58:84,0,183	0/1:5,0:5:24.46:24,0,37	0/0:22,0:18:26.19:0,26,297	0/0:16,0:13:26.88:0,27,228	0/1:29,0:29:99:493,0,163	0/0:31,0:31:72.02:0,72,910	0/0:20,0:20:45.08:0,45,579	0/0:26,0:25:27.07:0,27,387	0/0:25,0:25:39.07:0,39,542	0/1:26,0:26:99:487,0,111	0/1:28,0:28:99:545,0,131	0/1:28,0:28:99:271,0,184	0/1:17,0:17:66.10:66,0,168	0/1:28,0:28:99:492,0,147	0/1:22,0:22:99:247,0,129	0/0:17,0:17:12.01:0,12,112	0/1:35,0:35:99:399,0,232	0/1:22,0:22:99:240,0,110	0/0:23,0:23:36.05:0,36,455	0/0:29,0:29:63.10:0,63,790	0/0:32,0:32:75.13:0,75,1001	0/1:18,0:18:94.22:94,0,99	0/1:29,0:30:99:248,0,201	0/1:27,0:27:30.46:30,0,125	0/1:24,0:24:70.70:586,0,71	0/1:34,0:34:99:651,0,148	1/1:6,28:33:48.03:1173,48,0	0/1:10,0:10:3.91:263,0,4
chr10	49269802	.	GCAAGCAAGCAAGCAAGCAAACAAACAAA	G	811.50	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.750;DP=681;FS=8.813;HRun=0;HaplotypeScore=497.4809;InbreedingCoeff=0.9383;MQ=62.61;MQ0=2;MQRankSum=-1.964;QD=50.72;ReadPosRankSum=1.278;VQSLOD=0.4376;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:96.09:0,96,4892	0/0:4,0:4:12.03:0,12,931	0/0:23,0:18:54.18:0,54,3040	0/0:17,0:13:36.09:0,36,2267	0/0:27,0:27:78.25:0,78,7843	0/0:31,0:31:93.23:0,93,6766	0/0:19,0:19:57.14:0,57,4781	0/0:27,0:26:78.25:0,78,4632	0/0:23,0:23:66.03:0,66,3983	0/0:25,0:25:75.24:0,75,6358	0/0:29,0:29:84.27:0,84,7459	0/0:28,0:28:78.25:0,78,7401	0/0:17,0:17:48.13:0,48,3615	0/0:25,0:25:72.25:0,72,7282	0/0:21,0:21:60.19:0,60,5773	1/1:2,14:16:12.04:897,12,0	0/0:36,0:36:84.27:0,84,7271	0/0:21,0:21:45.15:0,45,3932	0/0:24,0:24:66.14:0,66,4571	0/0:28,0:28:81.28:0,81,8687	0/0:32,0:32:96.28:0,96,8986	0/0:18,0:18:48.15:0,48,2960	0/0:28,0:28:76.98:0,77,6038	0/0:24,0:24:48.62:0,49,3161	0/0:24,0:24:66.21:0,66,6612	0/0:35,0:35:99:0,102,9830	0/0:34,0:33:66.61:0,67,6605	0/0:10,0:10:30.10:0,30,3010
chr10	49269818	.	G	GCAAA	11395.39	PASS	AB=0.896;AC=38;AF=0.679;AN=56;BaseQRankSum=-5.119;DP=743;FS=0.000;HRun=0;HaplotypeScore=134.4081;InbreedingCoeff=0.6454;MQ=59.55;MQ0=4;MQRankSum=0.656;QD=19.75;ReadPosRankSum=1.606;VQSLOD=4.6752;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:16,1:30:12.04:207,12,0	1/1:1,0:9:8.02:81,8,0	0/0:29,0:22:9.98:0,10,121	0/0:26,0:19:12.61:0,13,195	1/1:12,20:32:53.87:972,54,0	0/1:31,0:31:74.32:74,0,268	0/1:24,0:24:99:135,0,153	1/1:28,0:28:33.04:316,33,0	0/0:14,0:14:26.92:0,27,218	1/1:7,18:25:54.11:1019,54,0	1/1:12,19:31:12.83:976,13,0	1/1:13,1:30:30.10:523,30,0	1/1:11,0:24:9.03:157,9,0	1/1:10,19:29:39:882,39,0	1/1:9,0:30:27.09:471,27,0	0/0:14,0:14:12.01:0,12,112	1/1:15,24:43:33.08:744,33,0	1/1:7,11:23:18.06:434,18,0	0/0:25,0:23:24.95:0,25,338	0/0:29,0:29:57.08:0,57,721	0/0:29,0:29:60.13:0,60,847	1/1:8,0:23:29.91:323,30,0	1/1:13,0:30:31.75:501,32,0	1/1:10,1:24:11.04:109,11,0	1/1:7,21:29:42.14:1013,42,0	1/1:11,20:32:63.19:1330,63,0	0/1:36,0:35:99:714,0,104	0/1:4,9:14:2.91:413,0,3
chr10	49269984	.	GC	G	394.93	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.258;DP=610;FS=0.000;HRun=4;HaplotypeScore=121.1762;InbreedingCoeff=0.9922;MQ=70.70;MQ0=0;MQRankSum=-3.230;QD=24.68;ReadPosRankSum=0.064;VQSLOD=2.1387;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,111,1554	0/0:10,0:10:27.08:0,27,360	0/0:9,0:9:27.07:0,27,358	0/0:15,0:13:20.86:0,21,426	0/0:29,0:29:87.28:0,87,1199	0/0:25,0:25:72.24:0,72,1007	0/0:20,0:20:57.15:0,57,776	0/0:33,0:33:93.31:0,93,1302	0/0:27,0:27:75.24:0,75,1033	0/0:23,0:23:66.22:0,66,924	0/0:15,0:15:39.13:0,39,545	0/0:21,0:21:60.20:0,60,839	0/0:24,0:24:63.21:0,63,881	0/0:23,0:23:69.18:0,69,912	0/0:34,0:34:93.31:0,93,1301	1/1:1,15:16:42.10:490,42,0	0/0:27,0:27:66.01:0,66,924	0/0:19,0:19:45.15:0,45,622	0/0:20,0:20:60.20:0,60,836	0/0:19,0:19:51.17:0,51,714	0/0:18,0:18:51.14:0,51,694	0/0:26,0:26:78.26:0,78,1090	0/0:24,0:24:69.23:0,69,965	0/0:22,0:22:66.19:0,66,903	0/0:15,0:15:27.09:0,27,378	0/0:20,0:20:57.19:0,57,794	0/0:26,0:26:75.19:0,75,1011	0/0:11,0:11:30.04:0,30,380
chr10	49270002	.	GT	G	5020.64	PASS	AB=0.929;AC=33;AF=0.589;AN=56;BaseQRankSum=-10.769;DP=624;FS=0.000;HRun=12;HaplotypeScore=109.9915;InbreedingCoeff=0.9130;MQ=64.48;MQ0=0;MQRankSum=-1.889;QD=13.25;ReadPosRankSum=7.048;VQSLOD=4.4217;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:12,32:44:46.65:725,47,0	1/1:2,11:14:28.90:211,29,0	0/0:8,0:8:4.19:0,4,108	0/1:12,1:11:4.22:4,0,78	0/0:11,0:35:68.70:0,69,415	1/1:3,0:26:42.77:124,43,0	1/1:3,0:20:28.51:82,29,0	0/0:10,0:34:71.70:0,72,408	1/1:2,0:28:44.81:129,45,0	0/0:17,0:27:59.82:0,60,370	0/0:4,0:14:23.09:0,23,131	1/1:5,19:25:46.83:354,47,0	1/1:0,25:25:71.60:557,72,0	0/0:5,0:30:57.12:0,57,305	1/1:4,28:32:68.70:534,69,0	1/1:2,0:10:8.91:34,9,0	0/0:0,0:25:59.44:0,59,301	0/0:2,0:19:28.41:0,28,144	1/1:2,13:15:35.84:278,36,0	1/1:6,8:14:17.86:139,18,0	1/1:6,13:19:38.80:302,39,0	1/1:7,15:23:17.73:282,18,0	1/1:4,13:18:37.87:284,38,0	1/1:2,24:27:70.77:540,71,0	0/0:5,0:18:23.65:0,24,133	0/0:7,0:25:55.20:0,55,304	1/1:3,23:26:56.44:440,56,0	0/0:1,0:10:17.04:0,17,86
chr10	49270028	.	G	GCGGC	599.32	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.928;DP=614;FS=4.422;HRun=0;HaplotypeScore=144.7617;InbreedingCoeff=0.9297;MQ=80.66;MQ0=0;MQRankSum=-4.122;QD=35.25;ReadPosRankSum=-1.853;VQSLOD=3.4720;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,123,2436	0/0:11,0:11:27.09:0,27,559	0/0:21,0:22:53.60:0,54,952	0/0:16,0:16:29.25:0,29,616	0/0:21,0:20:57.20:0,57,1190	0/0:29,0:29:81.20:0,81,1615	0/0:26,0:26:69.09:0,69,1366	0/0:27,0:27:71.96:0,72,1275	0/0:27,0:27:72.21:0,72,1451	0/0:27,0:27:78.23:0,78,1548	0/0:7,0:7:15.94:0,16,310	0/0:31,0:31:81.23:0,81,1610	0/0:33,0:33:96.33:0,96,1972	0/0:27,0:27:54.16:0,54,1031	0/0:27,0:27:78.13:0,78,1524	1/1:3,9:17:29.87:694,30,0	0/0:28,0:28:72.25:0,72,1435	0/0:14,0:14:33.09:0,33,619	0/0:15,0:15:45.12:0,45,890	0/0:14,0:14:36.02:0,36,693	0/0:18,0:18:54.19:0,54,1120	0/0:14,0:14:42.13:0,42,824	0/0:25,0:25:69.20:0,69,1362	0/0:27,0:27:78.27:0,78,1598	0/0:13,0:13:24.07:0,24,441	0/0:26,0:26:78.25:0,78,1551	0/0:25,0:25:66.23:0,66,1381	0/0:6,0:6:9.03:0,9,189
chr10	49270170	.	T	TC	8171.22	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-15.011;DP=649;FS=1.389;HRun=3;HaplotypeScore=84.9084;InbreedingCoeff=0.9986;MQ=77.46;MQ0=0;MQRankSum=-1.408;QD=36.16;ReadPosRankSum=4.343;VQSLOD=5.1959;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,42:45:99:1511,108,0	1/1:1,10:11:33:425,33,0	0/0:19,0:19:37.99:0,38,439	0/0:15,0:15:33.04:0,33,354	0/0:28,0:28:84.25:0,84,996	0/0:21,0:21:63.18:0,63,746	0/0:24,0:24:72.10:0,72,810	0/0:19,0:19:39.06:0,39,433	0/0:18,0:18:54.08:0,54,595	0/0:33,0:33:96.21:0,96,1111	0/0:18,0:18:39.10:0,39,448	1/1:0,25:25:72.24:1007,72,0	1/1:0,18:18:54.18:754,54,0	0/0:14,0:14:42.11:0,42,483	1/1:2,32:34:87.29:1215,87,0	1/1:1,20:21:57.19:797,57,0	0/0:41,0:41:99:0,114,1350	0/0:21,0:21:60.18:0,60,718	0/0:19,0:19:48.10:0,48,540	0/0:16,0:16:45.14:0,45,539	0/0:30,0:30:75.22:0,75,889	1/1:2,31:33:87.29:1216,87,0	1/1:1,14:15:32.84:448,33,0	1/1:3,21:24:57.19:798,57,0	0/0:27,0:27:81.22:0,81,956	0/0:22,0:22:62.78:0,63,729	0/0:30,0:30:81.24:0,81,960	0/0:8,0:8:18:0,18,216
chr10	49270728	.	GT	G	4866.08	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=15.079;DP=402;FS=41.173;HRun=1;HaplotypeScore=90.8665;InbreedingCoeff=0.9609;MQ=93.68;MQ0=0;MQRankSum=-14.256;QD=33.79;ReadPosRankSum=-0.241;VQSLOD=1.9750;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,129,1903	0/0:4,0:4:12.01:0,12,157	0/0:27,0:27:70.73:0,71,921	0/0:27,0:27:32.25:0,32,711	1/1:0,8:8:18.06:248,18,0	1/1:0,7:7:18.06:249,18,0	1/1:0,10:10:30.09:400,30,0	1/1:0,7:7:18.06:249,18,0	1/1:0,7:7:12:144,12,0	1/1:0,11:11:27.09:374,27,0	1/1:0,8:8:24.08:323,24,0	0/0:27,0:27:81.23:0,81,1149	0/0:23,0:23:65.90:0,66,978	1/1:0,10:10:27.05:348,27,0	0/0:32,0:32:93.29:0,93,1356	0/0:15,0:15:45.15:0,45,672	1/1:1,7:8:11.98:136,12,0	1/1:0,5:5:15.05:208,15,0	1/1:0,4:4:9:105,9,0	1/1:0,13:13:30.10:413,30,0	1/1:0,8:8:15.04:204,15,0	0/0:27,0:27:81.23:0,81,1140	0/0:11,0:11:33.11:0,33,492	0/0:22,0:22:66.20:0,66,949	1/1:0,17:17:51.17:695,51,0	1/1:0,6:6:12.04:166,12,0	1/1:0,11:11:33.08:437,33,0	1/1:0,4:4:12.04:166,12,0
chr10	49270882	.	GCACACCAGTGA	G	5177.77	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=10.181;DP=458;FS=11.752;HRun=0;HaplotypeScore=190.4896;InbreedingCoeff=0.9259;MQ=97.33;MQ0=0;MQRankSum=-10.314;QD=48.39;ReadPosRankSum=2.996;VQSLOD=3.8107;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,111,5827	0/0:5,0:5:15.05:0,15,855	0/0:30,0:30:78.27:0,78,3735	0/0:23,0:23:60.21:0,60,2544	1/1:5,12:17:24.08:838,24,0	0/0:10,0:10:24.07:0,24,1064	0/0:13,0:13:30.10:0,30,1412	1/1:8,4:12:11.98:255,12,0	0/0:10,0:10:12.04:0,12,342	1/1:4,8:12:24.08:836,24,0	1/1:5,4:9:12.04:419,12,0	0/0:33,0:33:99:0,99,5296	0/0:21,0:21:63.22:0,63,3482	1/1:1,2:3:3.01:105,3,0	0/0:22,0:22:63.22:0,63,3457	0/0:18,0:18:48.16:0,48,2657	1/1:9,5:14:6.02:210,6,0	1/1:6,5:11:12.04:419,12,0	0/0:12,0:12:27.09:0,27,1248	0/0:17,0:17:36.12:0,36,1635	0/0:30,0:30:56.77:0,57,2473	0/0:14,0:14:39.13:0,39,2176	0/0:20,0:20:54.19:0,54,2678	0/0:25,0:25:75.26:0,75,3964	1/1:3,12:15:36.12:1258,36,0	1/1:6,4:10:12.04:419,12,0	0/0:10,0:10:24.08:0,24,1192	1/1:0,4:4:12.04:419,12,0
chr10	49271028	.	ATCTTCAAGCTGTG	A	16347.20	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=15.843;DP=461;FS=42.533;HRun=0;HaplotypeScore=192.1330;InbreedingCoeff=0.9515;MQ=78.68;MQ0=0;MQRankSum=-15.250;QD=75.33;ReadPosRankSum=1.696;VQSLOD=3.0656;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:93.32:0,93,6114	0/0:8,0:8:24.08:0,24,1613	0/0:22,0:21:60.20:0,60,2663	0/0:29,0:29:77.49:0,77,3937	1/1:1,17:18:36.12:1362,36,0	1/1:0,10:10:27.09:1114,27,0	1/1:0,13:13:27.09:1108,27,0	1/1:0,20:20:57.18:1513,57,0	1/1:0,17:17:24.08:1006,24,0	1/1:0,14:14:38.25:1400,38,0	1/1:0,7:7:18.06:750,18,0	0/0:18,0:18:54.19:0,54,3447	0/0:20,0:20:60.21:0,60,3581	1/1:0,9:9:12.04:503,12,0	0/0:30,0:30:90.31:0,90,5416	0/0:25,0:25:75.26:0,75,4470	1/1:0,18:18:24.08:1006,24,0	1/1:0,13:13:9.03:314,9,0	1/1:0,13:13:27.09:827,27,0	1/1:0,14:14:29.97:1250,30,0	1/1:3,1:4:2.98:68,3,0	0/0:16,0:16:48.16:0,48,3064	0/0:14,0:14:42.14:0,42,2838	0/0:30,0:30:90.29:0,90,5164	1/1:0,14:14:27.09:1114,27,0	1/1:0,11:11:30.10:1131,30,0	1/1:1,18:19:36.33:1506,36,0	1/1:0,3:3:9.03:377,9,0
chr10	49271041	.	G	GAGA	1995.17	PASS	AB=0.990;AC=14;AF=0.250;AN=56;BaseQRankSum=3.127;DP=482;FS=9.458;HRun=0;HaplotypeScore=166.5087;InbreedingCoeff=0.1746;MQ=82.20;MQ0=0;MQRankSum=-5.292;QD=12.63;ReadPosRankSum=-6.562;VQSLOD=1.0489;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:90.29:0,90,1464	0/0:9,0:9:24.08:0,24,400	0/0:20,0:20:47.52:0,48,694	0/0:27,0:27:57.17:0,57,942	1/1:18,0:17:0.02:241,0,0	0/1:11,1:12:41.81:99,0,42	0/0:13,0:13:16.36:0,16,57	1/1:27,0:27:10.27:835,10,0	0/1:17,0:17:15.39:15,0,38	0/1:15,0:15:41.30:256,0,41	0/1:7,0:7:16.56:60,0,17	0/0:21,0:21:60.21:0,60,997	0/0:17,0:17:51.17:0,51,846	0/0:9,0:9:9.83:0,10,36	0/0:25,0:25:75.24:0,75,1223	0/0:25,0:25:75.24:0,75,1224	0/0:18,0:18:19.73:0,20,73	0/1:13,0:13:1.02:125,0,1	0/1:14,0:14:15.02:180,0,15	0/1:16,0:16:37.41:72,0,37	1/1:2,4:6:6.02:136,6,0	0/0:23,0:23:63.22:0,63,1049	0/0:17,0:17:48.15:0,48,771	0/0:31,0:31:84.29:0,84,1389	0/0:14,0:14:6.26:0,6,50	0/1:13,0:13:43.25:135,0,43	0/0:20,0:20:31.27:0,31,120	0/0:3,0:3:7.79:0,8,29
chr10	49271218	.	A	AG	19639.20	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=19.417;DP=692;FS=12.199;HRun=0;HaplotypeScore=110.4962;InbreedingCoeff=0.9999;MQ=81.51;MQ0=0;MQRankSum=-6.262;QD=44.84;ReadPosRankSum=-0.591;VQSLOD=2.8200;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:93.26:0,93,1262	0/0:13,0:13:39.13:0,39,545	0/0:25,0:25:62.30:0,62,844	0/0:14,0:14:36.10:0,36,477	1/1:0,39:39:99:1817,114,0	1/1:0,18:18:45.15:708,45,0	1/1:0,20:20:54.18:862,54,0	1/1:0,41:41:99:1879,123,0	1/1:1,30:31:87.30:1375,87,0	1/1:3,27:30:90.30:1399,90,0	1/1:0,23:23:63.21:1006,63,0	0/0:22,0:22:63.20:0,63,864	0/0:30,0:30:84.27:0,84,1157	1/1:2,19:21:60.20:942,60,0	0/0:31,0:31:93.31:0,93,1301	0/0:30,0:30:90.29:0,90,1240	1/1:0,17:17:45.15:718,45,0	1/1:0,25:25:75.26:1188,75,0	1/1:0,15:15:42.06:640,42,0	1/1:1,39:40:99:1815,120,0	1/1:0,21:21:63.21:1007,63,0	0/0:21,0:21:63.20:0,63,866	0/0:23,0:23:69.23:0,69,965	0/0:13,0:13:39.13:0,39,544	1/1:0,26:26:75.19:1166,75,0	1/1:0,28:28:84.27:1301,84,0	1/1:2,29:31:84.29:1339,84,0	1/1:0,12:12:30.10:479,30,0
chr10	49271673	.	TCAG	T	16716.48	PASS	AB=0.523;AC=33;AF=0.589;AN=56;BaseQRankSum=20.949;DP=728;FS=14.737;HRun=0;HaplotypeScore=168.1831;InbreedingCoeff=0.9443;MQ=85.10;MQ0=0;MQRankSum=-13.603;QD=40.67;ReadPosRankSum=1.708;VQSLOD=5.3608;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:84.27:0,84,1845	0/0:15,0:15:42.14:0,42,952	0/0:29,0:29:87.03:0,87,1800	0/0:27,0:27:77.97:0,78,1629	1/1:3,20:23:51.13:815,51,0	1/1:1,28:29:81.28:1346,81,0	1/1:3,21:24:54.18:898,54,0	1/1:7,21:28:63.20:1018,63,0	0/1:2,21:23:4.78:935,0,5	1/1:3,26:29:75.21:1217,75,0	1/1:3,14:17:42.14:699,42,0	0/0:30,0:30:90.31:0,90,2021	0/0:32,0:32:87.30:0,87,1941	1/1:1,26:27:72.20:1168,72,0	0/0:37,0:37:99:0,108,2389	0/0:36,0:36:99:0,108,2421	1/1:3,26:29:63.17:1019,63,0	1/1:0,19:19:45.15:735,45,0	1/1:4,12:16:36.09:570,36,0	1/1:2,32:34:93.32:1548,93,0	1/1:3,13:16:33.03:464,33,0	0/0:30,0:30:87.30:0,87,1955	0/0:22,0:22:63.20:0,63,1376	0/0:27,0:27:81.28:0,81,1796	1/1:2,24:26:66.23:1097,66,0	1/1:3,29:32:87.27:1390,87,0	1/1:1,27:28:75.26:1249,75,0	1/1:0,11:11:33.11:550,33,0
chr10	49272168	.	C	CAT	670.20	PASS	AB=1.000;AC=5;AF=0.156;AN=32;BaseQRankSum=-3.480;DP=214;FS=0.978;HRun=0;HaplotypeScore=60.5179;InbreedingCoeff=0.5181;MQ=69.10;MQ0=2;MQRankSum=-1.080;QD=24.82;ReadPosRankSum=-0.583;VQSLOD=3.7338;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,102,1272	0/0:8,0:8:24.08:0,24,303	0/0:4,0:4:3:0,3,28	0/1:3,0:2:7.09:7,0,21	./.	./.	./.	./.	./.	./.	./.	0/0:19,0:19:51.15:0,51,631	0/0:26,0:26:63.20:0,63,795	./.	0/0:22,0:22:48.15:0,48,606	1/1:4,16:21:45.15:748,45,0	./.	0/0:2,0:2:0.43:0,0,4	0/0:3,0:3:0.47:0,0,1	1/1:3,0:3:3.68:15,4,0	./.	0/0:21,0:21:54.17:0,54,681	0/0:24,0:24:57.18:0,57,719	0/0:11,0:11:27.09:0,27,341	0/0:1,0:1:2.22:0,2,7	./.	0/0:2,0:2:0.89:0,1,2	./.
chr10	49272180	.	TGGTTTC	T	71.10	PASS	AB=1.000;AC=7;AF=0.250;AN=28;BaseQRankSum=2.347;DP=216;FS=2.049;HRun=0;HaplotypeScore=83.0129;InbreedingCoeff=0.5743;MQ=78.97;MQ0=0;MQRankSum=-2.256;QD=7.11;ReadPosRankSum=-0.646;VQSLOD=1.8245;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,117,4210	0/0:9,0:9:27.09:0,27,949	0/0:6,0:6:15.01:0,15,322	0/1:5,0:5:12.10:12,0,239	./.	./.	./.	./.	./.	./.	./.	0/0:21,0:21:63.21:0,63,2163	0/0:24,0:24:72.25:0,72,2695	./.	0/0:22,0:22:66.23:0,66,2483	0/0:20,0:20:54.18:0,54,1503	./.	1/1:0,2:2:2.70:7,3,0	1/1:0,1:1:3.01:77,3,0	./.	./.	0/0:20,0:20:60.21:0,60,2219	0/0:28,0:28:79.15:0,79,2831	0/0:13,0:13:39.13:0,39,1460	./.	./.	1/1:0,2:2:3.01:74,3,0	./.
chr10	49272319	.	CA	C	883.36	PASS	AC=26;AF=0.542;AN=48;BaseQRankSum=9.138;DP=236;FS=53.233;HRun=7;HaplotypeScore=50.1945;InbreedingCoeff=0.8140;MQ=103.12;MQ0=0;MQRankSum=-9.155;QD=21.03;ReadPosRankSum=-2.806;VQSLOD=-0.6039;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:63.20:0,63,793	0/0:10,0:10:30.10:0,30,378	0/0:13,0:13:32.95:0,33,411	0/0:18,0:18:36.98:0,37,423	./.	1/1:0,5:5:15.03:153,15,0	1/1:1,6:7:15.03:153,15,0	1/1:1,4:5:12.03:122,12,0	1/1:0,5:5:12.03:122,12,0	1/1:0,1:1:3.01:31,3,0	./.	0/0:17,0:17:51.15:0,51,629	0/0:22,0:22:66.21:0,66,830	1/1:0,2:2:6.01:61,6,0	0/0:21,0:21:63.20:0,63,793	0/0:11,0:11:33.11:0,33,415	1/1:0,1:1:3.01:31,3,0	1/1:0,1:1:3.01:31,3,0	1/1:0,5:5:6.48:62,6,0	./.	./.	0/0:18,0:18:51.15:0,51,629	0/0:24,0:24:63.20:0,63,793	0/0:18,0:18:54.17:0,54,679	1/1:0,1:1:3.01:31,3,0	1/1:0,3:3:9.02:92,9,0	1/1:0,3:3:9.02:92,9,0	1/1:0,3:3:9.02:92,9,0
chr10	49272402	.	AAGAAAAAGGAAAAGGAAAAGAAAAAG	A	2966.79	PASS	AC=26;AF=0.542;AN=48;BaseQRankSum=6.548;DP=286;FS=60.807;HRun=0;HaplotypeScore=170.1935;InbreedingCoeff=0.7818;MQ=66.74;MQ0=5;MQRankSum=-8.092;QD=42.38;ReadPosRankSum=1.229;VQSLOD=1.0281;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:60.21:0,60,5904	0/0:7,0:7:21.07:0,21,2107	0/0:27,0:17:36.07:0,36,1833	0/0:26,0:15:27.83:0,28,1434	./.	1/1:3,2:5:14.92:485,15,0	1/1:1,9:11:5.69:224,6,0	1/1:8,0:8:20.80:142,21,0	1/1:2,1:3:5.95:42,6,0	1/1:4,0:4:5.93:40,6,0	./.	0/0:24,0:24:72.25:0,72,6957	0/0:19,0:19:57.18:0,57,5364	1/1:0,5:5:6.49:426,6,0	0/0:20,0:19:57.18:0,57,5244	0/0:14,0:14:38.21:0,38,4150	1/1:0,7:7:6.02:426,6,0	1/1:1,2:3:5.99:235,6,0	1/1:7,1:7:14.89:294,15,0	1/1:0,5:5:3.01:205,3,0	1/1:0,5:5:3.01:206,3,0	0/0:17,0:17:51.18:0,51,4996	0/0:17,0:17:42.14:0,42,3857	0/0:16,0:16:45.15:0,45,4889	./.	1/1:1,1:2:3.01:213,3,0	1/1:0,4:4:3.01:213,3,0	./.
chr10	49272426	.	AAG	A	826.30	PASS	AC=28;AF=0.560;AN=50;BaseQRankSum=8.286;DP=260;FS=47.466;HRun=0;HaplotypeScore=56.4801;InbreedingCoeff=0.7270;MQ=69.53;MQ0=2;MQRankSum=-8.119;QD=13.55;ReadPosRankSum=-0.427;VQSLOD=1.5265;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:60.19:0,60,1042	0/0:10,0:10:30.10:0,30,538	0/0:19,0:14:38.47:0,38,534	0/0:19,0:11:24.07:0,24,381	1/1:0,1:1:3.01:45,3,0	1/1:2,0:2:5.95:43,6,0	1/1:9,0:9:2.98:21,3,0	1/1:0,9:9:27.04:358,27,0	./.	1/1:0,3:3:6.02:81,6,0	./.	0/0:23,0:23:69.16:0,69,1178	0/0:18,0:18:54.17:0,54,922	1/1:5,0:5:5.95:43,6,0	0/0:16,0:15:48.16:0,48,839	0/0:18,0:18:54.19:0,54,970	1/1:7,0:7:5.96:43,6,0	1/1:2,0:2:2.98:21,3,0	1/1:2,4:5:12.01:157,12,0	1/1:5,0:5:3.01:44,3,0	1/1:5,0:5:3.01:44,3,0	0/0:14,0:14:42.13:0,42,725	0/0:16,0:16:48.15:0,48,832	0/0:18,0:18:54.17:0,54,941	1/1:0,1:1:3.01:45,3,0	1/1:2,0:2:5.93:40,6,0	1/1:4,0:4:2.98:21,3,0	./.
chr10	49272710	.	TGG	T	2927.32	PASS	AB=0.588;AC=29;AF=0.558;AN=52;BaseQRankSum=12.790;DP=374;FS=16.293;HRun=6;HaplotypeScore=79.7381;InbreedingCoeff=0.8164;MQ=94.94;MQ0=0;MQRankSum=-12.799;QD=23.42;ReadPosRankSum=-2.079;VQSLOD=0.7761;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:41:99:0,123,2198	0/0:7,0:7:21.06:0,21,351	0/0:22,0:23:53.04:0,53,830	0/0:23,0:23:57.15:0,57,912	1/1:0,2:2:3.01:40,3,0	1/1:1,11:12:21.07:280,21,0	1/1:1,7:8:15.05:187,15,0	1/1:4,24:28:54.18:720,54,0	0/1:3,7:10:35.99:182,0,36	1/1:0,3:3:9.03:120,9,0	1/1:0,1:1:3.01:32,3,0	0/0:20,0:20:60.21:0,60,1064	0/0:25,0:25:66.23:0,66,1188	1/1:3,9:12:27.09:360,27,0	0/0:28,0:28:78.27:0,78,1401	0/0:31,0:31:87.30:0,87,1552	1/1:0,7:7:8.99:97,9,0	1/1:1,5:6:9.03:120,9,0	1/1:2,6:8:12.04:160,12,0	1/1:0,4:4:9.03:120,9,0	./.	0/0:12,0:12:30.09:0,30,503	0/0:7,0:7:18.06:0,18,324	0/0:25,0:25:63.22:0,63,1131	1/1:0,3:3:9.03:117,9,0	1/1:2,12:14:30.10:400,30,0	1/1:0,7:7:15.05:200,15,0	./.
chr10	49272864	.	A	ATATGTAAGAGGTTGGGCAGAATTCTATATAT	38066.40	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=3.503;DP=387;FS=50.764;HRun=0;HaplotypeScore=293.1117;InbreedingCoeff=0.9141;MQ=82.01;MQ0=0;MQRankSum=-13.947;QD=175.42;ReadPosRankSum=-0.196;VQSLOD=2.9915;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:57.14:0,57,3291	0/0:12,0:12:33.11:0,33,2163	0/0:15,0:15:36.10:0,36,1476	0/0:16,0:16:48.10:0,48,1786	1/1:27,0:27:57.05:4105,57,0	1/1:10,0:10:9.03:743,9,0	1/1:13,0:13:24:1973,24,0	1/1:24,0:24:60.20:3091,60,0	1/1:5,0:5:5.99:452,6,0	1/1:14,0:14:23.98:2088,24,0	1/1:26,1:27:57.20:5865,57,0	0/0:16,0:16:45.14:0,45,2897	0/0:15,0:15:45.14:0,45,2741	1/1:3,0:3:2.97:20,3,0	0/0:16,0:16:48.16:0,48,2956	0/0:14,0:14:42.14:0,42,3114	1/1:8,0:8:21.03:1529,21,0	1/1:6,0:6:9.50:1119,10,0	1/1:6,0:6:6.02:824,6,0	1/1:28,2:30:66.18:7430,66,0	1/1:4,0:4:9.03:798,9,0	0/0:6,0:6:18.06:0,18,1362	0/0:15,0:15:45.15:0,45,3273	0/0:24,0:24:66.23:0,66,4931	1/1:10,1:13:27.09:3185,27,0	1/1:15,0:15:36.11:2777,36,0	1/1:5,0:5:11.99:536,12,0	1/1:7,0:7:18.06:1531,18,0
chr10	49273009	.	TTAATTA	T	3819.59	PASS	AC=34;AF=0.708;AN=48;BaseQRankSum=3.321;DP=144;FS=52.147;HRun=0;HaplotypeScore=87.6123;InbreedingCoeff=0.6639;MQ=62.54;MQ0=2;MQRankSum=-5.227;QD=37.82;ReadPosRankSum=3.996;VQSLOD=1.1549;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:9.55:0,10,127	0/0:4,0:4:6.02:0,6,85	1/1:6,0:4:0.89:2,1,0	0/0:8,0:5:9.65:0,10,146	1/1:2,3:5:9.03:182,9,0	1/1:8,2:10:24.08:424,24,0	1/1:2,2:4:6.02:119,6,0	1/1:7,11:18:39.13:889,39,0	1/1:0,2:2:3.01:70,3,0	1/1:4,3:7:12.04:242,12,0	1/1:2,1:3:6.02:108,6,0	0/0:4,0:4:6.91:0,7,117	0/0:4,0:4:7.45:0,7,84	1/1:5,1:6:15.05:247,15,0	0/0:5,0:5:9.09:0,9,62	./.	1/1:1,6:7:21.07:460,21,0	1/1:4,2:6:12.04:234,12,0	1/1:7,1:8:6.02:117,6,0	1/1:4,1:5:15.05:236,15,0	1/1:0,2:2:6.02:139,6,0	./.	0/0:2,0:2:2.23:0,2,8	./.	1/1:4,0:4:6.02:97,6,0	1/1:2,0:2:3.01:47,3,0	1/1:5,1:6:12.04:206,12,0	./.
chr10	49273011	.	AATTATAATATATTATAATTAT	A	4496.77	PASS	AC=32;AF=0.640;AN=50;BaseQRankSum=6.286;DP=136;FS=67.787;HRun=0;HaplotypeScore=122.5107;InbreedingCoeff=0.6823;MQ=59.49;MQ0=2;MQRankSum=-5.353;QD=49.96;ReadPosRankSum=4.189;VQSLOD=1.5602;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:24.08:0,24,1098	0/0:3,0:3:9.03:0,9,300	0/0:5,0:3:2.68:0,3,11	0/0:9,0:5:11.78:0,12,245	1/1:3,2:5:8.62:214,9,0	1/1:4,6:10:23.24:940,23,0	1/1:3,1:4:5.61:115,6,0	1/1:15,0:16:6.86:68,7,0	1/1:2,0:2:2.50:9,2,0	1/1:5,2:7:11.21:345,11,0	1/1:1,2:3:6.02:126,6,0	0/0:4,0:4:9.03:0,9,308	0/0:4,0:4:12.03:0,12,467	1/1:2,4:6:14.64:592,15,0	0/0:5,0:5:12.04:0,12,591	./.	1/1:6,1:7:15.85:227,16,0	1/1:4,2:6:11.01:347,11,0	1/1:4,1:5:2.06:182,2,0	1/1:1,4:5:14.64:579,15,0	1/1:2,0:2:5.36:22,5,0	0/0:1,0:1:2.97:0,3,20	0/0:2,0:2:6.02:0,6,307	./.	1/1:1,3:4:6.02:208,6,0	1/1:1,1:2:3.01:164,3,0	1/1:4,2:6:11.63:359,12,0	./.
chr10	49273018	.	ATATAT	A	1941.10	PASS	AB=1.000;AC=42;AF=0.840;AN=50;BaseQRankSum=-2.025;DP=114;FS=3.303;HRun=0;HaplotypeScore=92.3729;InbreedingCoeff=0.3660;MQ=71.86;MQ0=0;MQRankSum=-1.639;QD=20.65;ReadPosRankSum=1.539;VQSLOD=2.9248;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,8:10:20.99:394,21,0	1/1:0,1:1:3.01:63,3,0	0/0:5,0:4:3.48:0,3,53	0/0:11,0:6:6.51:0,7,140	1/1:5,0:5:8.45:59,8,0	1/1:8,0:8:17.24:195,17,0	0/1:3,0:3:0.41:9,0,0	1/1:13,0:13:30.52:120,31,0	1/1:2,0:2:2.80:13,3,0	1/1:5,0:5:11.50:90,12,0	0/1:3,0:3:3.73:5,0,4	1/1:1,2:3:3.01:63,3,0	1/1:1,2:3:6.02:126,6,0	1/1:5,0:5:8.21:98,8,0	1/1:0,3:3:9.03:189,9,0	./.	1/1:7,0:7:19.07:107,19,0	1/1:4,0:4:11.51:94,12,0	1/1:2,0:2:5.75:47,6,0	1/1:5,0:5:8.15:88,8,0	1/1:2,0:2:5.68:28,6,0	./.	1/1:0,4:4:5.71:125,6,0	1/1:1,0:1:3.01:46,3,0	0/0:3,0:3:4.26:0,4,13	1/1:1,0:1:3.01:35,3,0	1/1:4,0:4:8.51:68,9,0	./.
chr10	49273030	.	TA	T	828.79	PASS	AB=0.819;AC=23;AF=0.426;AN=54;BaseQRankSum=6.217;DP=153;FS=25.757;HRun=1;HaplotypeScore=100.7319;InbreedingCoeff=0.1905;MQ=81.53;MQ0=0;MQRankSum=-3.922;QD=8.54;ReadPosRankSum=2.644;VQSLOD=-0.2754;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:30.08:0,30,400	0/0:1,0:1:3.01:0,3,33	0/0:7,0:5:8.94:0,9,103	0/0:18,0:11:22.75:0,23,283	1/1:5,0:5:2.37:8,2,0	0/1:8,0:8:3.74:32,0,4	0/1:3,2:5:7.04:26,0,7	0/1:11,2:13:29.14:29,0,180	1/1:2,1:3:3.01:32,3,0	1/1:5,2:7:9.48:79,9,0	0/1:3,1:4:21.52:24,0,22	0/0:2,0:2:3.01:0,3,33	0/0:2,0:2:6.02:0,6,85	0/1:5,1:6:4.16:70,0,4	0/0:4,0:4:12.04:0,12,154	0/0:2,0:2:6.02:0,6,96	0/1:7,1:8:10.62:36,0,11	1/1:4,1:5:7.60:47,8,0	0/1:2,2:4:9.26:64,0,9	0/1:5,2:7:1.73:122,0,2	1/1:2,2:4:6.01:64,6,0	0/0:1,0:1:3.01:0,3,48	0/0:5,0:5:9.01:0,9,94	0/0:1,0:1:3.01:0,3,48	0/1:3,1:4:22.66:23,0,29	1/1:1,3:4:11.25:113,11,0	1/1:3,7:10:23.42:226,23,0	./.
chr10	49273034	.	CATAATTATAAA	C	1766.31	PASS	AB=0.671;AC=15;AF=0.278;AN=54;BaseQRankSum=7.561;DP=116;FS=9.896;HRun=0;HaplotypeScore=93.2351;InbreedingCoeff=-0.1316;MQ=95.16;MQ0=0;MQRankSum=-4.850;QD=32.71;ReadPosRankSum=5.870;VQSLOD=1.8700;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:30.10:0,30,1390	0/0:1,0:1:3.01:0,3,116	0/0:7,0:5:12.03:0,12,252	0/0:19,0:12:20.88:0,21,362	1/1:0,2:2:3.01:89,3,0	1/1:0,6:6:18.06:481,18,0	0/1:2,1:3:17.11:26,0,17	0/0:2,0:2:5.99:0,6,50	0/0:1,0:1:2.99:0,3,23	0/1:2,2:4:35.38:167,0,35	0/1:1,2:3:5.32:5,0,16	0/0:2,0:2:3.01:0,3,118	0/0:2,0:2:6.02:0,6,258	0/1:1,4:5:3.60:274,0,4	0/0:4,0:4:12.04:0,12,514	0/0:2,0:2:6.02:0,6,338	0/1:1,1:2:16.14:84,0,16	0/1:1,2:3:17.69:173,0,18	0/1:2,1:3:52.32:83,0,52	0/1:2,4:6:29.33:259,0,29	0/0:2,0:2:5.87:0,6,39	0/0:1,0:1:3.01:0,3,170	0/0:5,0:5:9.03:0,9,338	0/0:1,0:1:3.01:0,3,146	0/1:1,3:4:14.10:53,0,14	0/1:3,1:4:67.73:79,0,68	0/1:7,2:9:99:142,0,133	./.
chr10	49273105	.	A	AGG	13358.86	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=11.566;DP=546;FS=61.999;HRun=4;HaplotypeScore=141.1093;InbreedingCoeff=0.9803;MQ=69.62;MQ0=2;MQRankSum=-10.760;QD=40.36;ReadPosRankSum=-1.591;VQSLOD=0.4113;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:18:44.81:0,45,571	0/0:5,0:5:9.02:0,9,120	0/0:32,0:26:73.53:0,74,891	0/0:30,0:22:57.17:0,57,722	1/1:3,21:26:42:721,42,0	1/1:4,23:27:63.17:1081,63,0	1/1:1,12:13:30.10:524,30,0	1/1:3,16:20:48.15:768,48,0	1/1:2,11:13:36.08:612,36,0	1/1:2,17:19:54.16:915,54,0	1/1:3,21:24:57.20:1026,57,0	0/0:17,0:17:48.16:0,48,639	0/0:26,0:26:78.26:0,78,1040	1/1:2,19:21:54.18:940,54,0	0/0:32,0:32:87.27:0,87,1133	0/0:21,0:21:43.23:0,43,780	1/1:0,18:18:44.83:806,45,0	1/1:1,13:15:36.08:613,36,0	1/1:5,13:18:8.10:726,8,0	1/1:6,20:26:57.20:1014,57,0	1/1:0,13:13:30.10:538,30,0	0/0:9,0:9:24.07:0,24,319	0/0:9,0:9:21.07:0,21,280	0/0:15,0:15:29.77:0,30,399	1/1:1,22:24:54.19:967,54,0	1/1:3,19:22:54.14:930,54,0	1/1:8,12:20:53.88:727,54,0	1/1:0,11:11:27.05:452,27,0
chr10	49273211	.	CA	C	11143.71	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=18.867;DP=565;FS=18.535;HRun=1;HaplotypeScore=122.9268;InbreedingCoeff=0.9991;MQ=92.26;MQ0=0;MQRankSum=-10.372;QD=35.26;ReadPosRankSum=5.793;VQSLOD=2.9642;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:93.28:0,93,1460	0/0:10,0:10:30.09:0,30,457	0/0:25,0:25:75.24:0,75,1172	0/0:28,0:28:78.21:0,78,1149	1/1:0,19:19:51.17:662,51,0	1/1:1,23:23:66.21:855,66,0	1/1:0,13:13:30.10:389,30,0	1/1:0,20:20:60.20:778,60,0	1/1:0,17:15:45.15:583,45,0	1/1:0,21:21:57.19:739,57,0	1/1:3,16:19:48.12:604,48,0	0/0:23,0:23:66.21:0,66,1028	0/0:24,0:24:72.23:0,72,1128	1/1:1,18:19:51.17:657,51,0	0/0:30,0:30:90.29:0,90,1413	0/0:24,0:24:72.25:0,72,1149	1/1:0,17:17:42.14:544,42,0	1/1:0,16:16:45.13:584,45,0	1/1:0,12:12:36.12:467,36,0	1/1:0,18:17:42.14:544,42,0	1/1:2,38:40:99:1401,108,0	0/0:10,0:10:30.08:0,30,434	0/0:10,0:10:30.10:0,30,480	0/0:30,0:30:87.25:0,87,1318	1/1:0,19:19:54.18:700,54,0	1/1:0,22:22:66.21:855,66,0	1/1:0,13:13:39.13:508,39,0	1/1:0,7:7:21.07:272,21,0
chr10	49273366	.	TC	T	10383.69	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=19.061;DP=651;FS=3.006;HRun=4;HaplotypeScore=161.6728;InbreedingCoeff=0.9712;MQ=79.72;MQ0=0;MQRankSum=-14.049;QD=29.33;ReadPosRankSum=0.030;VQSLOD=3.1810;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,147,1958	0/0:6,0:6:15.05:0,15,209	0/0:22,0:22:62.88:0,63,786	0/0:19,0:19:51.11:0,51,646	1/1:1,8:9:15.05:180,15,0	1/1:0,29:28:78.24:930,78,0	1/1:1,24:25:69.18:807,69,0	1/1:5,19:24:54.15:635,54,0	1/1:1,22:22:57.17:677,57,0	1/1:3,7:10:27.08:315,27,0	1/1:1,6:7:21.05:241,21,0	0/0:35,0:35:99:0,99,1386	0/0:39,0:39:99:0,111,1494	1/1:2,50:52:99:1685,141,0	0/0:21,0:21:63.19:0,63,847	0/0:32,1:33:60.37:0,60,1247	1/1:2,20:22:50.89:611,51,0	1/1:3,21:24:60.18:717,60,0	1/1:2,10:12:27.08:324,27,0	1/1:1,12:13:33.05:374,33,0	1/1:2,42:44:99:1284,109,0	0/0:13,0:13:39.12:0,39,530	0/0:9,0:9:27.08:0,27,362	0/0:48,0:48:99:0,144,2013	1/1:3,6:9:9.03:108,9,0	1/1:2,28:30:78.22:921,78,0	1/1:1,14:15:42.13:504,42,0	1/1:4,2:6:6.02:72,6,0
chr10	49273626	.	TA	T	11812.99	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=17.757;DP=685;FS=0.301;HRun=7;HaplotypeScore=104.7159;InbreedingCoeff=0.9997;MQ=80.05;MQ0=0;MQRankSum=-5.956;QD=26.97;ReadPosRankSum=0.233;VQSLOD=4.4713;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,120,1509	0/0:13,0:13:36.12:0,36,453	0/0:19,0:19:44.84:0,45,508	0/0:18,0:18:43.85:0,44,475	1/1:2,24:26:57.12:581,57,0	1/1:1,17:18:48.11:490,48,0	1/1:1,25:26:69.15:704,69,0	1/1:3,34:37:99:1041,102,0	1/1:1,20:21:63.14:642,63,0	1/1:3,33:36:96.22:978,96,0	1/1:2,22:24:63.14:642,63,0	0/0:27,0:27:72.23:0,72,906	0/0:21,0:21:60.19:0,60,752	1/1:2,24:26:60.14:612,60,0	0/0:25,0:25:69.22:0,69,868	0/0:20,1:21:26.56:0,27,637	1/1:1,29:30:84.17:848,84,0	1/1:1,24:25:63.14:643,63,0	1/1:1,23:24:69.12:694,69,0	1/1:1,31:32:81.18:826,81,0	1/1:0,25:25:72.16:734,72,0	0/0:21,0:21:60.19:0,60,755	0/0:17,0:17:45.13:0,45,554	0/0:21,1:22:32.59:0,33,724	1/1:1,19:20:54.12:550,54,0	1/1:4,30:34:87.16:878,87,0	1/1:1,21:22:63.14:643,63,0	1/1:2,10:12:30.07:306,30,0
chr10	49273895	.	C	CT	19895.60	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=20.566;DP=881;FS=0.521;HRun=1;HaplotypeScore=194.9698;InbreedingCoeff=0.9999;MQ=81.66;MQ0=0;MQRankSum=-10.921;QD=39.09;ReadPosRankSum=1.369;VQSLOD=4.3588;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,129,1659	0/0:15,0:15:45.15:0,45,584	0/0:31,0:31:86.87:0,87,1011	0/0:26,0:26:66.20:0,66,824	1/1:2,27:29:75.12:1048,75,0	1/1:4,21:25:63.21:937,63,0	1/1:2,24:26:66.19:957,66,0	1/1:2,25:27:75.22:1092,75,0	1/1:1,34:35:99:1453,102,0	1/1:2,39:41:99:1701,117,0	1/1:2,25:27:72.09:1001,72,0	0/0:49,0:49:99:0,138,1748	0/0:43,0:43:99:0,126,1605	1/1:1,31:32:90.26:1313,90,0	0/0:50,0:50:99:0,144,1842	0/0:35,1:36:57.52:0,58,1210	1/1:0,25:25:60.20:893,60,0	1/1:0,29:29:84.28:1258,84,0	1/1:1,22:23:69.21:993,69,0	1/1:1,35:36:96.14:1337,96,0	1/1:2,27:29:66.18:964,66,0	0/0:25,0:25:72.23:0,72,934	0/0:21,0:21:57.18:0,57,739	0/0:31,0:31:90.25:0,90,1137	1/1:1,29:30:78.15:1167,78,0	1/1:2,45:48:99:1987,135,0	1/1:3,34:37:93.25:1344,93,0	1/1:0,10:10:30.10:449,30,0
chr10	49274044	.	CAGGGG	C	17581.77	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=20.074;DP=670;FS=30.858;HRun=0;HaplotypeScore=185.3012;InbreedingCoeff=0.9725;MQ=76.53;MQ0=0;MQRankSum=-20.842;QD=55.29;ReadPosRankSum=1.848;VQSLOD=3.5353;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:58:99:0,169,5235	0/0:14,0:14:42.14:0,42,1312	0/0:34,0:34:99:0,99,2871	0/0:22,0:22:66.20:0,66,1840	1/1:1,21:22:54.19:1169,54,0	1/1:0,14:14:36.12:781,36,0	1/1:3,22:25:57.20:1236,57,0	1/1:1,18:19:54.19:1171,54,0	1/1:3,29:32:78.27:1691,78,0	1/1:1,22:23:57.20:1236,57,0	1/1:0,23:23:57.20:1234,57,0	0/0:37,0:37:99:0,102,3129	0/0:25,0:25:72.24:0,72,2165	1/1:0,26:26:75.26:1625,75,0	0/0:42,0:42:99:0,117,3529	0/0:31,1:32:28.22:0,28,2644	1/1:5,6:11:20.80:371,21,0	1/1:0,8:8:21.07:456,21,0	1/1:1,10:11:27.09:576,27,0	1/1:1,24:25:72.25:1561,72,0	1/1:1,8:9:18.06:391,18,0	0/0:37,0:37:99:0,108,3328	0/0:21,0:21:63.22:0,63,1989	0/0:30,0:30:90.30:0,90,2731	1/1:0,14:14:33.11:715,33,0	1/1:1,25:26:72.25:1548,72,0	1/1:2,27:29:81.28:1756,81,0	1/1:0,1:1:3.01:65,3,0
chr10	49274619	.	GT	G	2366.52	PASS	AB=0.982;AC=27;AF=0.482;AN=56;BaseQRankSum=14.176;DP=654;FS=1.427;HRun=11;HaplotypeScore=127.4107;InbreedingCoeff=0.7293;MQ=70.23;MQ0=0;MQRankSum=-1.309;QD=6.26;ReadPosRankSum=1.963;VQSLOD=1.8890;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,3:39:36.52:0,37,970	0/0:6,0:6:15.03:0,15,154	0/0:15,0:15:23.76:0,24,202	0/1:16,1:12:22.93:23,0,142	1/1:38,0:38:48.79:340,49,0	0/0:24,0:25:39.99:0,40,505	0/0:17,0:18:50.88:0,51,502	1/1:35,0:35:39.93:173,40,0	0/0:17,0:18:33.99:0,34,432	0/1:26,0:26:68.95:69,0,113	0/1:27,0:27:6.65:187,0,7	0/0:17,0:17:48.12:0,48,512	0/0:26,0:26:43.62:0,44,633	1/1:25,0:25:21.24:210,21,0	0/0:22,0:23:58.15:0,58,636	0/0:21,2:23:32.45:0,32,527	1/1:18,0:18:25.40:130,25,0	1/1:14,0:14:7.84:112,8,0	1/1:15,0:15:22.28:97,22,0	1/1:35,0:35:0.87:246,1,0	1/1:16,0:16:30.83:145,31,0	0/0:26,1:28:50.32:0,50,700	0/0:25,2:27:22.54:0,23,598	0/0:11,0:11:24.06:0,24,256	1/1:34,0:34:46.68:276,47,0	1/1:32,0:32:14.48:228,14,0	1/1:29,0:29:50.09:246,50,0	1/1:15,1:16:4.29:99,4,0
chr10	49274629	.	TTA	T	1849.61	PASS	AB=0.991;AC=28;AF=0.500;AN=56;BaseQRankSum=14.295;DP=642;FS=5.676;HRun=0;HaplotypeScore=137.2424;InbreedingCoeff=0.6645;MQ=72.08;MQ0=0;MQRankSum=-3.846;QD=4.80;ReadPosRankSum=2.089;VQSLOD=2.7947;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,120,1922	0/0:7,0:7:21.05:0,21,303	0/0:18,0:18:37.66:0,38,433	0/0:18,0:12:28.17:0,28,318	1/1:33,2:35:45.18:269,45,0	0/0:22,0:22:32.74:0,33,289	0/1:20,0:20:22.68:23,0,238	1/1:23,2:25:33.05:271,33,0	0/1:18,0:18:6.94:7,0,200	0/1:25,1:26:99:155,0,107	1/1:26,0:26:7.97:137,8,0	0/0:19,0:19:54.18:0,54,944	0/0:25,0:25:73.09:0,73,1196	1/1:23,0:23:26.96:141,27,0	0/0:24,0:24:69.21:0,69,1141	0/0:21,0:21:60.05:0,60,944	1/1:20,0:20:19.62:59,20,0	1/1:17,0:17:1.80:43,2,0	1/1:14,0:14:24.33:144,24,0	0/1:34,0:34:6.47:154,0,6	1/1:15,0:15:24.06:73,24,0	0/0:29,0:29:87.16:0,87,1414	0/0:25,0:25:75.06:0,75,1202	0/0:9,0:9:27.09:0,27,478	1/1:35,0:35:22.37:131,22,0	1/1:33,1:34:22.57:244,23,0	1/1:27,0:27:35.70:109,36,0	1/1:16,0:16:0.54:100,1,0
chr10	49274630	.	TA	T	10020.38	PASS	AB=0.976;AC=32;AF=0.571;AN=56;BaseQRankSum=6.406;DP=628;FS=0.310;HRun=2;HaplotypeScore=95.3483;InbreedingCoeff=0.7129;MQ=73.03;MQ0=0;MQRankSum=-0.771;QD=24.09;ReadPosRankSum=-1.624;VQSLOD=4.2433;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,106,1336	0/0:7,0:7:18.04:0,18,212	0/0:18,0:18:36.26:0,36,335	0/1:18,0:13:10.63:11,0,180	1/1:3,31:34:96:1148,96,0	0/1:21,1:22:24.75:119,0,25	0/1:19,0:19:32.14:56,0,32	1/1:2,23:25:71.87:762,72,0	0/1:17,1:18:35.23:65,0,35	1/1:4,18:22:47.73:553,48,0	1/1:8,18:26:66.79:829,67,0	0/0:19,0:19:54.15:0,54,692	0/0:25,0:25:73.75:0,74,903	1/1:5,18:23:62.49:781,62,0	0/0:22,0:22:65.34:0,65,769	0/0:20,0:20:49.40:0,49,631	1/1:0,20:20:27.09:347,27,0	1/1:0,16:16:30.10:386,30,0	1/1:0,14:14:42.06:463,42,0	1/1:2,31:33:86.89:1016,87,0	1/1:0,15:15:33.11:425,33,0	0/0:29,0:29:81.21:0,81,1009	0/0:24,0:24:69.11:0,69,844	0/0:9,0:9:27.08:0,27,345	1/1:1,34:35:78.20:993,78,0	1/1:2,31:33:90.90:1082,91,0	1/1:0,27:27:55.01:685,55,0	1/1:3,13:16:26.72:299,27,0
chr10	49275829	.	G	GA	8523.51	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-13.480;DP=605;FS=3.970;HRun=9;HaplotypeScore=63.4627;InbreedingCoeff=0.9589;MQ=80.03;MQ0=0;MQRankSum=-0.068;QD=23.74;ReadPosRankSum=0.270;VQSLOD=5.7423;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,106,1070	0/0:10,0:10:29.99:0,30,260	0/0:30,0:26:35.10:0,35,368	0/0:24,0:21:16.84:0,17,144	1/1:2,19:21:31.09:526,31,0	1/1:2,18:21:24.92:486,25,0	1/1:2,14:16:10.04:339,10,0	1/1:5,24:29:26.08:735,26,0	1/1:2,20:22:16.06:405,16,0	1/1:8,19:27:54.11:577,54,0	1/1:6,22:28:63.17:695,63,0	0/0:17,1:18:17.81:0,18,384	0/0:25,0:25:68.97:0,69,599	1/1:4,12:16:36.10:398,36,0	0/0:21,0:21:56.99:0,57,495	0/0:18,0:18:17.49:0,17,314	1/1:3,11:14:27.07:299,27,0	1/1:1,21:22:60.16:664,60,0	1/1:6,8:14:21.06:232,21,0	1/1:3,22:25:65.96:655,66,0	1/1:2,11:13:30.08:332,30,0	0/0:19,0:19:50.99:0,51,442	0/0:20,0:20:29.31:0,29,395	0/0:16,1:17:11.78:0,12,324	1/1:4,20:25:4.36:540,4,0	1/1:2,25:27:72.19:796,72,0	1/1:8,23:31:17.64:646,18,0	1/1:1,7:8:18.05:199,18,0
chr10	49278985	.	C	CTGTGTCTG	24438.43	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-11.930;DP=655;FS=4.337;HRun=0;HaplotypeScore=151.7028;InbreedingCoeff=0.9878;MQ=82.25;MQ0=0;MQRankSum=-14.932;QD=61.40;ReadPosRankSum=-0.517;VQSLOD=4.7950;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:70.94:0,71,1828	0/0:11,0:11:30.10:0,30,801	0/0:28,0:28:28.68:0,29,1312	0/0:27,0:26:57.17:0,57,1426	1/1:8,9:19:24.08:1020,24,0	1/1:9,17:29:48.16:2042,48,0	1/1:11,12:24:42.14:1782,42,0	1/1:22,12:39:69.21:2429,69,0	1/1:16,6:24:21.07:893,21,0	1/1:12,14:29:57.17:2062,57,0	1/1:8,8:18:21.07:892,21,0	0/0:10,0:10:24.08:0,24,641	0/0:24,0:23:60.19:0,60,1506	1/1:16,8:25:27.09:1145,27,0	0/0:19,0:19:51.17:0,51,1323	0/0:28,0:28:66.17:0,66,1600	1/1:4,6:11:15.05:638,15,0	1/1:5,6:10:12.04:447,12,0	1/1:8,5:13:21.07:871,21,0	1/1:15,13:29:39.13:1645,39,0	1/1:14,9:25:21.07:894,21,0	0/0:22,0:22:60.18:0,60,1494	0/0:29,0:29:78.27:0,78,2083	0/0:28,0:28:75.26:0,75,2002	1/1:6,11:17:33.11:1404,33,0	1/1:16,23:42:87.30:3478,87,0	1/1:12,14:30:51.03:2158,51,0	1/1:4,9:13:15.05:638,15,0
chr10	49279156	.	TCA	T	821.96	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=-0.461;DP=493;FS=0.000;HRun=0;HaplotypeScore=104.0876;InbreedingCoeff=0.7505;MQ=43.52;MQ0=25;MQRankSum=3.665;QD=5.79;ReadPosRankSum=0.516;VQSLOD=2.9593;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:28:14.70:0,15,105	0/0:6,0:6:11.95:0,12,94	0/0:6,0:4:4.95:0,5,48	0/0:14,0:2:5.96:0,6,44	0/0:21,0:20:17.91:0,18,138	1/1:5,12:17:2.98:21,3,0	1/1:23,0:22:26.87:211,27,0	0/0:21,0:19:27.13:0,27,189	1/1:28,1:27:13.94:319,14,0	0/0:16,0:15:24.34:0,24,186	0/0:21,0:21:5.90:0,6,38	0/0:19,0:19:11.94:0,12,93	0/0:16,0:13:11.80:0,12,94	0/0:17,0:16:11.04:0,11,91	0/0:15,0:11:5.74:0,6,37	0/0:21,0:20:14.78:0,15,98	0/0:20,0:18:20.91:0,21,174	0/0:24,0:22:16.22:0,16,258	1/1:12,0:11:11.84:78,12,0	1/1:12,1:13:5.87:103,6,0	1/1:21,0:18:20.51:149,21,0	0/0:15,0:12:5.98:0,6,47	0/1:10,0:8:0:0,0,0	0/0:17,0:16:3.57:0,4,27	0/0:21,0:19:24.44:0,24,205	0/0:21,0:20:38.55:0,39,276	1/1:14,3:17:17.75:117,18,0	0/0:7,0:5:9:0,9,81
chr10	49281620	.	ACACG	A	4518.47	PASS	AB=1.000;AC=35;AF=0.625;AN=56;BaseQRankSum=7.502;DP=494;FS=4.134;HRun=0;HaplotypeScore=122.8724;InbreedingCoeff=0.8076;MQ=80.34;MQ0=3;MQRankSum=-3.571;QD=14.72;ReadPosRankSum=-1.582;VQSLOD=4.2761;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,108,1986	0/0:9,0:9:18.01:0,18,302	0/0:20,0:18:14.61:0,15,179	0/1:16,0:15:16.25:16,0,46	1/1:16,3:19:3.01:53,3,0	1/1:22,0:22:32.98:386,33,0	1/1:24,0:24:24.01:248,24,0	1/1:24,0:24:41.94:459,42,0	1/1:21,0:21:27.01:296,27,0	1/1:14,0:14:30.09:400,30,0	1/1:4,11:15:6.02:106,6,0	0/0:11,0:11:27.07:0,27,500	0/0:16,0:16:42.06:0,42,627	1/1:8,3:12:23.99:280,24,0	0/0:16,0:16:39.06:0,39,658	0/0:10,0:9:12.01:0,12,157	1/1:24,4:28:30:423,30,0	1/1:3,17:19:18.06:303,18,0	1/1:20,0:20:32.77:301,33,0	1/1:12,0:11:2.02:250,2,0	1/1:18,0:18:5.97:57,6,0	0/0:13,0:12:21.04:0,21,348	0/0:16,0:16:30.87:0,31,423	0/0:34,0:33:51.44:0,51,849	1/1:7,3:10:9.03:139,9,0	1/1:11,0:11:24:296,24,0	1/1:13,4:17:15.90:438,16,0	1/1:4,0:4:6:69,6,0
chr10	49281626	.	ACGCACGCG	A	6741.56	PASS	AB=0.888;AC=30;AF=0.536;AN=56;BaseQRankSum=2.291;DP=477;FS=6.354;HRun=0;HaplotypeScore=145.4163;InbreedingCoeff=0.4505;MQ=72.62;MQ0=3;MQRankSum=-5.890;QD=22.55;ReadPosRankSum=1.637;VQSLOD=3.8641;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,123,3598	0/0:9,0:9:18.03:0,18,507	0/1:13,0:12:5.16:5,0,193	0/1:13,0:12:2.43:2,0,55	1/1:6,1:17:3.48:38,3,0	1/1:8,11:19:32.98:728,33,0	1/1:8,9:17:24.07:499,24,0	1/1:2,16:18:47.97:873,48,0	1/1:11,5:16:27.05:541,27,0	1/1:2,12:14:33.05:745,33,0	0/1:13,1:15:12.60:68,0,13	0/0:11,0:11:30.08:0,30,913	0/0:18,0:18:42.09:0,42,1080	1/1:10,0:12:23.96:293,24,0	0/0:18,0:18:42.04:0,42,1228	0/0:8,0:7:12.01:0,12,256	0/1:27,1:29:29.19:458,0,29	0/1:18,1:18:7.81:221,0,8	1/1:13,3:16:32.72:441,33,0	0/1:15,0:15:18.47:423,0,18	1/1:5,14:18:6.02:137,6,0	0/0:16,0:15:24.05:0,24,598	0/0:17,0:17:34.59:0,35,785	0/0:35,0:34:57.42:0,57,1438	1/1:3,0:10:8.94:97,9,0	0/1:2,8:11:1.31:491,0,1	0/1:18,1:19:22.02:572,0,22	1/1:4,0:4:6:108,6,0
chr10	49281628	.	GCA	G	2490.24	PASS	AB=1.000;AC=30;AF=0.536;AN=56;BaseQRankSum=7.066;DP=467;FS=1.965;HRun=0;HaplotypeScore=122.2174;InbreedingCoeff=0.5067;MQ=69.32;MQ0=3;MQRankSum=-3.884;QD=8.71;ReadPosRankSum=1.171;VQSLOD=3.4127;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,1:49:1.98:0,2,1291	0/0:8,0:8:18.01:0,18,212	0/0:12,0:10:21.56:0,22,181	0/1:11,0:11:15.76:16,0,51	1/1:17,0:17:2.90:16,3,0	1/1:22,0:21:32.67:259,33,0	1/1:18,3:21:23.45:170,23,0	1/1:17,0:17:12.55:287,13,0	1/1:18,0:18:9.89:199,10,0	1/1:12,0:12:29.75:225,30,0	0/1:14,0:14:0.26:24,0,0	0/0:10,0:10:29.80:0,30,361	0/0:17,0:17:41.98:0,42,448	0/1:13,0:13:9.05:135,0,9	0/0:16,0:16:41.77:0,42,482	0/0:7,0:6:12:0,12,107	0/1:26,0:26:41.38:184,0,41	0/1:20,0:18:15.56:80,0,16	1/1:12,1:13:35.21:272,35,0	1/1:17,1:17:12.92:203,13,0	1/1:18,1:18:5.92:38,6,0	0/0:14,0:13:23.77:0,24,253	0/0:16,0:16:33.61:0,34,344	0/0:32,0:31:57.47:0,57,636	1/1:10,0:10:8.76:51,9,0	0/1:13,0:13:19.14:173,0,19	1/1:17,0:17:26.91:303,27,0	1/1:4,0:4:6:53,6,0
chr10	49281644	.	G	GCACACA	2509.92	PASS	AB=0.973;AC=31;AF=0.620;AN=50;BaseQRankSum=-4.548;DP=498;FS=16.822;HRun=0;HaplotypeScore=175.5106;InbreedingCoeff=-0.1059;MQ=51.46;MQ0=8;MQRankSum=0.234;QD=5.86;ReadPosRankSum=-3.168;VQSLOD=0.8119;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:46,0:48:34.48:34,0,258	1/1:3,5:9:6.49:195,6,0	./.	./.	0/1:20,0:20:8.63:42,0,9	0/0:23,0:21:17.81:0,18,248	0/0:23,0:23:12.04:0,12,181	0/1:20,0:20:34.06:34,0,50	0/0:13,0:13:12.04:0,12,220	0/1:17,0:16:0.30:154,0,0	0/1:13,0:13:31.82:57,0,32	1/1:5,0:9:6.02:136,6,0	1/1:20,0:19:17.85:318,18,0	0/1:21,0:21:68:68,0,125	1/1:4,7:15:8.92:232,9,0	1/1:2,0:6:2.93:57,3,0	0/1:27,0:27:67.60:255,0,68	0/1:25,0:23:32.60:33,0,134	0/1:11,0:11:1.55:199,0,2	1/1:24,0:23:9.26:135,9,0	1/1:21,0:20:2.97:49,3,0	0/1:10,0:16:0:0,0,0	1/1:7,7:15:2.91:78,3,0	1/1:21,1:31:5.20:83,5,0	0/1:12,0:12:59.38:59,0,89	0/1:22,0:22:7.78:222,0,8	0/1:19,0:19:34.07:217,0,34	./.
chr10	49281679	.	CGAAA	C	772.17	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=0.236;DP=501;FS=3.230;HRun=0;HaplotypeScore=130.9967;InbreedingCoeff=0.9095;MQ=54.06;MQ0=11;MQRankSum=0.182;QD=14.57;ReadPosRankSum=2.091;VQSLOD=3.5873;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:35:84.20:0,84,1827	0/0:10,0:10:28.27:0,28,521	0/0:16,0:10:20.27:0,20,537	0/0:18,0:12:30.10:0,30,680	0/0:19,0:19:33.81:0,34,752	1/1:8,5:13:24.08:404,24,0	1/1:3,23:26:8.88:154,9,0	0/0:12,0:12:24.08:0,24,557	1/1:10,3:13:21.07:350,21,0	0/0:22,0:21:45.10:0,45,1040	0/0:13,0:13:27.94:0,28,569	0/0:11,0:11:17.87:0,18,296	0/0:16,0:15:36.12:0,36,820	0/0:23,0:24:47.65:0,48,1024	0/0:17,0:17:29.87:0,30,476	0/0:7,0:7:9.03:0,9,207	0/0:31,0:31:78.05:0,78,1559	0/0:24,0:22:45.06:0,45,947	0/0:14,0:13:26.30:0,26,566	0/0:14,0:13:28.12:0,28,353	0/0:14,0:14:18.06:0,18,326	0/0:16,0:16:36.05:0,36,682	0/0:14,0:13:19.68:0,20,283	0/0:26,0:26:43.48:0,43,602	0/0:19,0:19:42.08:0,42,946	0/0:27,0:27:60.21:0,60,1414	0/0:20,0:20:48.03:0,48,929	0/0:2,0:2:6.02:0,6,140
chr10	49281768	.	ATT	A	9332.48	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=9.239;DP=519;FS=9.060;HRun=10;HaplotypeScore=67.3214;InbreedingCoeff=0.9848;MQ=73.66;MQ0=3;MQRankSum=-1.688;QD=27.45;ReadPosRankSum=1.747;VQSLOD=4.3316;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:27:69.22:0,69,1073	0/0:6,0:6:18.05:0,18,264	0/0:11,0:11:11.87:0,12,155	0/0:12,0:10:8.71:0,9,54	1/1:1,26:27:75.19:836,75,0	1/1:1,17:18:45.12:502,45,0	1/1:1,12:13:33.09:368,33,0	1/1:6,16:22:45.02:476,45,0	1/1:1,23:24:69.18:769,69,0	1/1:2,24:26:69.18:769,69,0	1/1:0,17:17:45.11:502,45,0	0/0:9,0:9:24.07:0,24,360	0/0:22,0:22:60.17:0,60,869	1/1:0,25:23:51.14:568,51,0	0/0:16,0:17:41.62:0,42,607	0/0:0,0:13:32.44:0,32,112	1/1:3,17:20:48.12:535,48,0	1/1:4,22:26:60.14:669,60,0	1/1:6,14:20:43.66:472,44,0	1/1:0,20:20:57.15:635,57,0	1/1:0,13:13:27.07:301,27,0	0/0:23,0:23:66.23:0,66,1048	0/0:17,0:17:51.16:0,51,785	0/0:18,0:21:56.15:0,56,782	1/1:1,20:21:48.13:535,48,0	1/1:3,15:18:45.09:492,45,0	1/1:0,18:18:48.13:535,48,0	1/1:1,11:12:33.08:368,33,0
chr10	49282616	.	G	GT	9586.77	PASS	AB=0.591;AC=44;AF=0.786;AN=56;BaseQRankSum=-5.588;DP=741;FS=4.604;HRun=12;HaplotypeScore=95.4528;InbreedingCoeff=0.6925;MQ=73.62;MQ0=4;MQRankSum=0.057;QD=15.27;ReadPosRankSum=2.253;VQSLOD=5.5558;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,24:26:60.10:583,60,0	1/1:6,10:17:26.88:248,27,0	0/0:22,1:16:4.65:0,5,91	0/0:22,0:18:16.21:0,16,137	0/1:15,30:49:9.63:640,0,10	0/0:27,0:28:67.53:0,68,476	0/0:18,0:18:35:0,35,246	1/1:5,25:32:48.79:566,49,0	0/0:17,1:20:20.58:0,21,304	1/1:11,26:38:59.76:688,60,0	1/1:3,27:30:69.01:652,69,0	1/1:4,19:23:7.57:311,8,0	1/1:4,11:15:21.03:204,21,0	1/1:9,17:26:33:311,33,0	1/1:7,29:37:49.88:620,50,0	1/1:8,11:20:11.45:256,11,0	1/1:7,16:23:48.04:458,48,0	1/1:7,21:30:35.67:374,36,0	1/1:10,11:24:19.77:311,20,0	1/1:11,25:38:46.71:537,47,0	1/1:6,11:18:23.87:218,24,0	1/1:10,18:29:6.96:350,7,0	0/1:12,24:39:3.99:572,0,4	1/1:2,15:18:4.30:235,4,0	1/1:6,17:25:25.84:386,26,0	1/1:7,23:30:44.16:554,44,0	1/1:6,15:20:2.14:183,2,0	1/1:1,17:19:33.05:331,33,0
chr10	49283758	.	A	AGGGTTCCACGTG	13026.14	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-4.740;DP=652;FS=11.494;HRun=0;HaplotypeScore=219.9631;InbreedingCoeff=0.9432;MQ=80.49;MQ0=0;MQRankSum=-13.301;QD=126.47;ReadPosRankSum=0.283;VQSLOD=4.1205;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,111,3997	0/0:14,0:14:42.14:0,42,1498	0/0:24,0:24:66.22:0,66,2210	0/0:11,0:11:33.11:0,33,955	0/0:20,0:20:57.20:0,57,2024	0/0:30,0:30:87.25:0,87,2982	0/0:21,0:21:63.22:0,63,2239	0/0:48,0:48:99:0,144,5214	0/0:16,0:16:45.14:0,45,1462	0/0:27,0:27:75.26:0,75,2801	0/0:24,0:24:72.22:0,72,2347	0/0:25,0:25:75.22:0,75,2601	0/0:34,0:34:99:0,102,3697	0/0:21,0:21:63.22:0,63,2370	0/0:37,0:37:99:0,108,4011	0/0:1,0:1:3.01:0,3,116	0/0:21,0:21:60.21:0,60,2132	0/0:14,0:14:38.80:0,39,1439	1/1:15,9:27:23.61:3138,24,0	1/1:13,12:26:63.22:3378,63,0	1/1:6,3:15:21.07:1214,21,0	0/0:27,0:27:81.28:0,81,2960	0/0:22,0:22:63.22:0,63,2390	0/0:30,0:30:87.30:0,87,3261	0/0:16,0:16:48.16:0,48,1657	0/0:24,0:24:69.23:0,69,2514	1/1:7,20:35:87.30:5297,87,0	0/0:4,0:4:12.04:0,12,463
chr10	49284344	.	T	TTGCA	41611.62	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-16.907;DP=818;FS=0.966;HRun=0;HaplotypeScore=125.2004;InbreedingCoeff=0.9649;MQ=78.19;MQ0=0;MQRankSum=-9.052;QD=67.55;ReadPosRankSum=4.308;VQSLOD=6.9876;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,52:62:99:3743,135,0	1/1:1,8:11:24.08:663,24,0	0/0:27,0:27:75.20:0,75,1351	0/0:28,0:28:81.11:0,81,1376	1/1:1,29:32:75.26:2082,75,0	1/1:3,22:26:60.21:1676,60,0	1/1:3,26:29:78.27:2150,78,0	1/1:7,22:31:81.25:2132,81,0	1/1:2,32:35:81.28:2262,81,0	1/1:2,30:34:93.30:2416,93,0	1/1:2,23:26:66.23:1811,66,0	1/1:3,32:37:99:2838,102,0	1/1:1,25:27:72.25:2009,72,0	1/1:1,26:29:66.23:1814,66,0	1/1:4,30:37:78.27:2150,78,0	1/1:1,0:1:3.01:83,3,0	1/1:2,19:22:63.22:1732,63,0	1/1:2,16:19:39.13:1090,39,0	0/0:31,0:31:90.27:0,90,1749	0/0:49,0:49:99:0,147,2880	0/0:23,0:23:63.22:0,63,1258	1/1:5,22:30:63.22:1738,63,0	1/1:0,24:25:60.21:1676,60,0	1/1:1,33:35:81.28:2231,81,0	1/1:1,25:26:75.26:2096,75,0	1/1:1,27:28:84.26:2214,84,0	0/0:44,0:44:99:0,132,2510	1/1:0,13:14:36.12:1005,36,0
chr10	49286446	.	T	TAC	2033.45	PASS	AB=0.909;AC=41;AF=0.759;AN=54;BaseQRankSum=-0.073;DP=619;FS=17.744;HRun=0;HaplotypeScore=196.4971;InbreedingCoeff=0.0093;MQ=51.90;MQ0=14;MQRankSum=-1.547;QD=3.63;ReadPosRankSum=-3.379;VQSLOD=0.8148;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:32,0:30:7.03:8,0,7	1/1:9,1:10:3.01:32,3,0	./.	0/0:21,0:16:6.01:0,6,66	1/1:17,0:17:3.59:24,4,0	0/1:15,11:26:22.21:126,0,22	0/1:16,12:29:14.73:389,0,15	1/1:24,0:24:22.61:175,23,0	0/1:18,5:23:12.84:232,0,13	1/1:29,0:28:17.48:114,17,0	0/1:18,0:17:15.50:16,0,16	0/1:26,0:23:6.82:7,0,12	1/1:18,1:19:12.79:187,13,0	1/1:25,0:22:7.37:75,7,0	0/1:26,0:26:53.43:94,0,53	1/1:15,0:21:1.32:212,1,0	1/1:18,0:18:5.90:33,6,0	1/1:14,0:14:6.77:30,7,0	1/1:16,0:13:4.73:30,5,0	1/1:18,0:18:4.07:27,4,0	1/1:31,0:28:3.46:24,3,0	1/1:24,0:23:2.30:22,2,0	0/0:12,0:12:5.73:0,6,35	0/1:32,0:31:4.11:57,0,4	0/1:24,0:22:0.09:0,0,0	1/1:35,0:30:22.15:248,22,0	1/1:17,0:17:3.15:8,3,0	1/1:4,0:4:0.47:1,0,0
chr10	49286475	.	ACATG	A	3621.52	PASS	AB=0.941;AC=25;AF=0.446;AN=56;BaseQRankSum=-3.246;DP=670;FS=68.488;HRun=0;HaplotypeScore=209.1518;InbreedingCoeff=-0.6926;MQ=40.28;MQ0=26;MQRankSum=1.505;QD=6.28;ReadPosRankSum=1.495;VQSLOD=0.0210;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:33,3:32:32.64:128,0,33	1/1:12,2:14:9.50:122,10,0	0/0:18,0:3:3.01:0,3,45	0/0:19,0:7:1.58:0,2,141	0/1:18,0:18:79.11:79,0,131	0/0:36,0:36:37.22:0,37,523	0/1:37,0:36:30.33:30,0,674	0/1:31,0:31:99:253,0,585	0/0:19,0:19:9.56:0,10,126	0/1:27,0:25:99:214,0,542	0/1:16,0:15:20.02:79,0,20	0/1:22,7:26:89.93:246,0,90	0/1:25,3:28:17.57:154,0,18	0/1:28,0:24:99:114,0,137	0/1:13,11:23:42.34:483,0,42	0/1:23,3:25:99:226,0,610	0/1:22,0:19:99:125,0,151	0/1:10,0:10:73.70:112,0,74	0/1:16,0:11:99:103,0,276	0/1:17,0:17:99:102,0,174	0/1:43,0:30:73.68:74,0,398	0/1:23,5:26:38.08:38,0,38	0/1:16,3:19:14.94:107,0,15	0/1:19,12:29:4.17:299,0,4	0/1:25,0:23:30.50:30,0,141	0/1:31,0:25:99:150,0,390	0/1:16,0:16:99:212,0,233	0/1:5,0:5:16.83:141,0,17
chr10	49286477	.	ATG	A	3491.03	PASS	AB=0.869;AC=27;AF=0.482;AN=56;BaseQRankSum=-1.923;DP=651;FS=64.605;HRun=0;HaplotypeScore=197.5682;InbreedingCoeff=-0.5249;MQ=41.27;MQ0=25;MQRankSum=0.483;QD=6.20;ReadPosRankSum=1.665;VQSLOD=1.0335;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:26,8:30:9.34:85,0,9	1/1:8,6:14:9.03:121,9,0	0/0:13,3:2:3.01:0,3,45	0/0:19,2:7:5.77:0,6,145	0/1:15,3:18:99:113,0,117	0/0:32,0:32:40.79:0,41,526	0/1:36,2:37:29.20:29,0,742	0/1:24,7:31:99:247,0,550	0/0:18,0:18:18.26:0,18,154	0/1:22,3:24:99:252,0,405	0/1:13,3:15:20.02:78,0,20	0/1:24,5:26:6.15:209,0,6	1/1:21,6:27:5.07:286,5,0	0/1:22,5:23:99:196,0,134	0/1:22,2:23:20.41:258,0,20	0/1:26,0:25:49.43:49,0,558	0/1:21,2:20:99:135,0,178	0/1:10,0:10:72:172,0,72	0/1:15,1:11:99:132,0,297	0/1:15,1:16:99:121,0,173	0/1:38,2:28:96.95:97,0,376	0/1:16,9:23:15.27:38,0,15	0/1:12,5:17:3.12:41,0,3	1/1:24,6:28:7.96:174,8,0	0/1:19,6:23:71.22:71,0,139	0/1:24,6:24:99:225,0,353	0/1:11,4:15:99:218,0,233	0/1:5,2:7:16.83:142,0,17
chr10	49286485	.	ATG	A	2189.99	PASS	AB=0.906;AC=23;AF=0.411;AN=56;BaseQRankSum=0.591;DP=642;FS=51.691;HRun=0;HaplotypeScore=197.8560;InbreedingCoeff=-0.4616;MQ=41.45;MQ0=24;MQRankSum=-2.641;QD=4.64;ReadPosRankSum=1.094;VQSLOD=1.4200;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:28,5:29:21.22:53,0,21	1/1:15,1:16:12.02:123,12,0	0/0:23,1:4:12.01:0,12,147	0/1:24,3:11:57.41:57,0,367	0/1:13,2:15:3.34:3,0,224	0/0:31,0:31:37.85:0,38,691	0/0:33,2:35:30.73:0,31,1009	0/1:20,6:26:99:167,0,622	0/1:18,1:19:0:0,0,221	0/1:21,2:22:99:172,0,371	0/1:15,2:16:60.89:79,0,61	0/1:25,3:25:28.65:114,0,29	0/1:24,2:26:0.87:250,0,1	0/1:25,3:24:99:152,0,146	0/1:22,0:21:63.06:63,0,84	0/0:26,1:26:34.97:0,35,679	0/1:23,1:21:99:123,0,138	0/1:8,0:8:77.79:110,0,78	0/1:15,0:12:99:168,0,126	0/1:14,1:15:32.64:112,0,33	0/1:35,2:28:64.36:67,0,64	0/0:22,2:22:7.29:0,7,35	0/1:14,2:16:3.07:3,0,17	0/0:24,3:25:13.47:0,13,67	0/1:21,5:23:28.16:28,0,153	0/1:25,3:23:99:177,0,351	0/1:12,4:16:34.49:218,0,34	0/1:5,0:7:17.65:105,0,18
chr10	49286487	.	GCACA	G	2231.30	PASS	AB=0.822;AC=20;AF=0.357;AN=56;BaseQRankSum=-3.935;DP=646;FS=4.798;HRun=0;HaplotypeScore=207.1741;InbreedingCoeff=0.1788;MQ=41.69;MQ0=24;MQRankSum=0.922;QD=6.74;ReadPosRankSum=3.454;VQSLOD=2.1774;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:32:15.55:16,0,93	0/1:12,0:16:26.91:57,0,27	0/0:25,0:4:12.04:0,12,222	0/0:28,0:12:29.73:0,30,473	1/1:7,8:15:21:297,21,0	0/0:31,0:31:31.38:0,31,706	0/0:32,0:35:39.86:0,40,894	0/1:20,7:27:3.86:264,0,4	0/0:19,0:19:15.85:0,16,226	0/1:16,7:23:99:347,0,100	1/1:10,7:16:5.95:68,6,0	0/1:27,0:26:7.07:7,0,138	0/1:22,0:26:32.63:33,0,106	0/1:15,13:24:32.24:230,0,32	0/1:20,0:19:10.53:11,0,78	0/0:15,0:25:45.57:0,46,740	1/1:10,13:20:21.02:350,21,0	0/1:4,4:8:72.83:135,0,73	0/0:11,0:12:15:0,15,135	0/0:4,1:14:10.35:0,10,48	0/0:24,0:29:24.70:0,25,112	0/0:19,0:22:7.66:0,8,69	0/0:13,0:17:2.99:0,3,24	0/0:25,0:25:6.45:0,6,47	1/1:18,8:23:15.05:251,15,0	0/1:22,7:24:98.83:248,0,99	0/0:8,0:16:16.45:0,16,75	1/1:4,3:7:9:99,9,0
chr10	49286835	.	T	TC	9529.76	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-8.595;DP=776;FS=5.335;HRun=1;HaplotypeScore=110.3242;InbreedingCoeff=1.0000;MQ=78.38;MQ0=0;MQRankSum=-2.009;QD=41.61;ReadPosRankSum=2.303;VQSLOD=4.6011;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,40:40:99:1663,111,0	1/1:0,20:20:60:817,60,0	0/0:19,0:19:48.01:0,48,568	0/0:16,0:17:48.02:0,48,556	0/0:28,0:28:84.27:0,84,1090	0/0:36,0:36:99:0,108,1387	0/0:23,0:23:69.21:0,69,881	0/0:31,0:31:87.26:0,87,1104	0/0:28,0:28:84.26:0,84,1075	0/0:32,0:33:96.20:0,96,1223	0/0:22,0:22:63.20:0,63,818	1/1:0,28:28:84.28:1258,84,0	1/1:1,28:29:78.22:1144,78,0	0/0:37,0:37:99:0,108,1402	1/1:0,35:35:99:1484,99,0	0/0:33,0:33:99:0,99,1273	0/0:18,0:18:54.18:0,54,701	0/0:15,0:15:45.11:0,45,566	0/0:22,0:22:57.18:0,57,740	0/0:16,0:16:42.05:0,42,507	0/0:52,0:52:99:0,156,1980	1/1:0,22:22:63.21:944,63,0	1/1:0,22:22:60.12:870,60,0	1/1:1,32:33:90.30:1349,90,0	0/0:30,0:30:81.22:0,81,1033	0/0:36,0:36:99:0,105,1338	0/0:35,0:35:99:0,105,1348	0/0:16,0:16:42.08:0,42,525
chr10	49287562	.	C	CT	9247.13	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-15.400;DP=805;FS=2.091;HRun=1;HaplotypeScore=70.9555;InbreedingCoeff=0.9997;MQ=81.60;MQ0=0;MQRankSum=-2.262;QD=42.61;ReadPosRankSum=1.577;VQSLOD=5.1801;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,30:34:87.30:1390,87,0	1/1:0,12:12:33.11:528,33,0	0/0:25,0:25:72.24:0,72,1002	0/0:22,0:22:63.19:0,63,825	0/0:34,0:34:99:0,102,1404	0/0:40,0:40:99:0,120,1675	0/0:26,0:26:78.26:0,78,1085	0/0:44,0:43:99:0,129,1784	0/0:38,0:38:99:0,114,1535	0/0:29,0:29:84.27:0,84,1140	0/0:18,0:18:54.17:0,54,733	1/1:0,28:28:78.27:1247,78,0	1/1:0,33:33:84.29:1343,84,0	0/0:36,0:36:99:0,108,1511	1/1:2,31:33:84.29:1335,84,0	0/0:34,0:34:99:0,102,1422	0/0:27,0:27:81.26:0,81,1109	0/0:12,0:12:36.12:0,36,503	0/0:12,0:12:36.12:0,36,504	0/0:45,0:45:99:0,135,1817	0/0:31,0:31:93.31:0,93,1297	1/1:0,36:36:99:1630,102,0	1/1:0,22:22:60.20:959,60,0	1/1:1,18:19:51.17:814,51,0	0/0:26,0:26:78.26:0,78,1091	0/0:40,0:40:99:0,111,1534	0/0:40,0:40:99:0,120,1676	0/0:9,0:9:27.09:0,27,376
chr10	49289882	.	C	CA	3809.33	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-7.024;DP=800;FS=2.405;HRun=2;HaplotypeScore=89.8517;InbreedingCoeff=0.9997;MQ=84.75;MQ0=0;MQRankSum=-1.902;QD=38.09;ReadPosRankSum=1.273;VQSLOD=4.1029;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,144,1785	0/0:10,0:10:27.07:0,27,321	0/0:28,0:28:78.17:0,78,922	0/0:27,0:27:71.15:0,71,854	0/0:40,0:40:99:0,114,1413	0/0:28,0:28:81.25:0,81,1004	0/0:29,0:29:87.24:0,87,1051	0/0:44,0:44:99:0,129,1579	0/0:25,0:25:72.23:0,72,893	0/0:27,0:27:78.23:0,78,956	0/0:25,0:25:75.22:0,75,915	0/0:33,0:33:96.30:0,96,1190	0/0:32,0:32:90.27:0,90,1103	0/0:30,0:30:84.25:0,84,1028	0/0:36,0:36:99:0,105,1269	0/0:25,0:25:72.21:0,72,880	0/0:25,0:25:72.23:0,72,892	0/0:23,0:23:63.20:0,63,779	1/1:1,19:20:57.15:764,57,0	1/1:2,24:26:66.19:928,66,0	1/1:2,26:28:78.26:1123,78,0	0/0:37,0:37:99:0,108,1326	0/0:26,0:26:69.17:0,69,816	0/0:29,0:29:81.25:0,81,1000	0/0:24,0:24:66.17:0,66,790	0/0:32,0:31:93.28:0,93,1143	1/1:1,25:26:69.23:994,69,0	0/0:13,0:13:39.12:0,39,483
chr10	49290492	.	T	TACCTA	13565.51	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-2.796;DP=631;FS=2.541;HRun=0;HaplotypeScore=125.7354;InbreedingCoeff=0.9949;MQ=81.68;MQ0=1;MQRankSum=-12.659;QD=72.54;ReadPosRankSum=2.076;VQSLOD=6.0481;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,32:36:75.26:2470,75,0	1/1:0,7:7:15.05:467,15,0	0/0:23,0:23:59.22:0,59,1303	0/0:21,0:21:57.03:0,57,1178	0/0:14,0:14:39.11:0,39,790	0/0:17,0:17:51.17:0,51,1117	0/0:25,0:25:75.26:0,75,1700	0/0:27,0:27:78.25:0,78,1565	0/0:24,0:24:72.25:0,72,1633	0/0:34,0:34:99:0,102,2306	0/0:16,0:16:48.12:0,48,1039	1/1:0,16:16:45.15:1495,45,0	1/1:0,17:19:51.18:1683,51,0	0/0:19,0:19:57.20:0,57,1295	1/1:2,25:27:66.23:2129,66,0	1/1:3,23:26:16.18:2080,16,0	0/0:29,0:29:87.30:0,87,2027	0/0:24,0:24:63.10:0,63,1523	0/0:26,0:26:78.27:0,78,1814	0/0:21,0:21:60.21:0,60,1370	0/0:39,0:39:99:0,117,2666	1/1:1,19:21:39.13:1265,39,0	1/1:0,10:11:24.08:787,24,0	1/1:2,21:23:36.03:1189,36,0	0/0:24,0:24:72.25:0,72,1625	0/0:22,0:22:60.21:0,60,1370	0/0:31,0:30:93.32:0,93,2083	0/0:8,0:8:24.08:0,24,559
chr10	49290769	.	AC	A	345.39	PASS	AB=0.649;AC=4;AF=0.071;AN=56;BaseQRankSum=6.476;DP=639;FS=3.315;HRun=1;HaplotypeScore=128.5991;InbreedingCoeff=-0.0837;MQ=61.73;MQ0=8;MQRankSum=-7.673;QD=5.23;ReadPosRankSum=1.479;VQSLOD=0.6103;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:51.13:0,51,658	0/0:10,0:10:29.67:0,30,363	0/0:30,0:22:57.41:0,57,793	0/0:25,0:20:57.43:0,57,763	0/0:29,0:29:84.26:0,84,1178	0/0:27,0:27:70.16:0,70,1071	0/0:18,0:18:54.16:0,54,754	0/0:42,0:41:99:0,117,1694	0/0:29,0:29:87.23:0,87,1275	0/0:17,0:17:51.17:0,51,737	0/0:21,0:21:63.18:0,63,875	0/0:22,0:22:36.08:0,36,474	0/0:19,0:19:39.06:0,39,523	0/0:11,0:11:21.07:0,21,295	0/0:29,0:29:51.14:0,51,678	0/0:18,0:18:3.20:0,3,125	0/0:36,0:36:69.23:0,69,963	0/0:30,0:30:48.16:0,48,659	0/1:8,7:13:99:120,0,189	0/1:13,10:23:99:130,0,420	0/1:4,7:11:18.96:19,0,146	0/0:22,0:22:54.18:0,54,767	0/0:30,0:30:68.50:0,68,811	0/0:22,0:22:42.14:0,42,574	0/0:28,0:28:54.15:0,54,723	0/0:22,0:21:63.21:0,63,904	0/1:6,11:17:99:185,0,201	0/0:12,0:12:24.08:0,24,325
chr10	49290771	.	AAACAAACAAAC	A	1460.95	PASS	AB=0.845;AC=5;AF=0.089;AN=56;BaseQRankSum=8.447;DP=642;FS=8.237;HRun=0;HaplotypeScore=229.9746;InbreedingCoeff=-0.0977;MQ=63.22;MQ0=7;MQRankSum=-6.812;QD=16.99;ReadPosRankSum=3.269;VQSLOD=1.5483;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:44.18:0,44,1777	0/0:9,0:9:26.12:0,26,991	0/0:31,0:23:64.09:0,64,1354	0/0:25,0:21:60.05:0,60,1250	0/0:29,0:29:81.27:0,81,2732	0/0:27,0:27:81.26:0,81,3372	0/0:18,0:18:48.09:0,48,1534	0/0:44,0:43:99:0,119,3524	0/0:30,0:30:87.30:0,87,3966	0/0:17,0:17:48.16:0,48,1956	0/0:21,0:21:63.20:0,63,2010	0/0:21,0:21:30.09:0,30,1155	0/0:19,0:19:36.12:0,36,1483	0/0:11,0:11:21.07:0,21,965	0/0:30,0:30:45.15:0,45,2082	0/1:18,0:18:40.98:309,0,41	0/0:38,0:38:63.22:0,63,2703	0/0:29,0:29:45.15:0,45,2078	0/1:12,3:13:96.59:217,0,97	0/1:19,5:24:99:451,0,129	0/1:9,2:11:28.38:69,0,28	0/0:21,0:21:54.09:0,54,1908	0/0:29,0:29:47.34:0,47,1680	0/0:22,0:22:39.13:0,39,1812	0/0:28,0:28:45.15:0,45,2070	0/0:22,0:21:60.20:0,60,2526	0/1:11,7:18:64.28:533,0,64	0/0:12,0:12:24.08:0,24,1127
chr10	49290773	.	AC	A	143.51	PASS	AB=0.545;AC=1;AF=0.018;AN=56;BaseQRankSum=8.427;DP=649;FS=15.304;HRun=1;HaplotypeScore=130.6005;InbreedingCoeff=-0.0331;MQ=64.16;MQ0=6;MQRankSum=-7.353;QD=7.97;ReadPosRankSum=2.758;VQSLOD=-0.2164;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:45.15:0,45,609	0/0:10,0:10:26.61:0,27,315	0/0:29,0:22:57.03:0,57,783	0/0:25,0:22:56.74:0,57,837	0/0:30,0:30:87.25:0,87,1184	0/0:27,0:27:78.68:0,79,1117	0/0:18,0:18:54.15:0,54,741	0/0:48,0:47:99:0,129,1797	0/0:32,0:32:96.26:0,96,1350	0/0:17,0:17:51.16:0,51,721	0/0:21,0:21:63.19:0,63,894	0/0:20,0:20:30.08:0,30,405	0/0:18,0:18:36.10:0,36,485	0/0:11,0:11:21.07:0,21,295	0/0:30,0:30:45.15:0,45,629	0/1:3,15:18:58.84:218,0,59	0/0:37,0:37:63.21:0,63,869	0/0:29,0:29:45.15:0,45,620	0/0:17,0:15:4.45:0,4,315	0/0:22,0:22:19.15:0,19,492	0/0:11,0:11:14.46:0,14,176	0/0:23,0:23:59.73:0,60,731	0/0:29,0:29:61.03:0,61,689	0/0:23,0:23:42.10:0,42,551	0/0:27,0:27:48.14:0,48,655	0/0:22,0:21:63.20:0,63,891	0/0:18,0:18:0.57:0,1,261	0/0:13,0:13:24.08:0,24,326
chr10	49290775	.	AAACAAAC	A	1311.75	PASS	AB=1.000;AC=6;AF=0.107;AN=56;BaseQRankSum=7.847;DP=639;FS=15.153;HRun=0;HaplotypeScore=186.7818;InbreedingCoeff=0.2488;MQ=65.56;MQ0=5;MQRankSum=-6.964;QD=17.49;ReadPosRankSum=3.348;VQSLOD=2.1730;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:43.92:0,44,1056	0/0:10,0:10:25.33:0,25,626	0/0:30,0:23:53.24:0,53,1045	0/0:26,0:22:66.01:0,66,990	0/0:30,0:30:81.26:0,81,1826	0/0:26,0:26:78.20:0,78,2242	0/0:19,0:19:57.12:0,57,1184	0/0:50,0:49:99:0,120,2189	0/0:33,0:33:96.31:0,96,2856	0/0:16,0:16:48.15:0,48,1193	0/0:22,0:22:63.20:0,63,1402	0/0:19,0:19:24.08:0,24,685	0/0:18,0:18:30.10:0,30,859	0/0:11,0:11:21.07:0,21,616	0/0:30,0:30:45.15:0,45,1322	1/1:5,13:18:19.83:686,20,0	0/0:38,0:38:57.15:0,57,1575	0/0:28,0:28:45.15:0,45,1320	0/1:13,0:12:99:130,0,116	0/1:22,0:22:99:255,0,182	0/1:8,0:8:33.41:33,0,70	0/0:22,0:22:51.03:0,51,1130	0/0:29,0:29:31.78:0,32,898	0/0:22,0:22:39.13:0,39,1136	0/0:26,0:26:45.15:0,45,1279	0/0:22,0:21:60.19:0,60,1583	0/1:14,0:14:64.28:337,0,64	0/0:13,0:13:24.08:0,24,708
chr10	49290782	.	C	CAAAA	17644.18	PASS	AB=1.000;AC=44;AF=0.786;AN=56;BaseQRankSum=-8.811;DP=647;FS=3.130;HRun=3;HaplotypeScore=110.2423;InbreedingCoeff=0.7510;MQ=68.46;MQ0=5;MQRankSum=0.936;QD=34.60;ReadPosRankSum=-0.967;VQSLOD=1.8207;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,20:24:37.27:1032,37,0	1/1:0,10:10:24.04:570,24,0	0/0:29,0:23:53:0,53,616	0/0:28,0:24:64.77:0,65,629	1/1:5,26:31:86.40:1398,86,0	0/0:27,0:27:35.75:0,36,938	0/0:20,0:20:53.85:0,54,522	1/1:44,0:43:99:1390,111,0	0/0:33,0:33:96.07:0,96,1357	1/1:1,10:14:39.03:757,39,0	1/1:1,21:24:71.72:1046,72,0	1/1:4,13:20:21.07:531,21,0	1/1:1,15:17:27.09:698,27,0	1/1:1,12:14:21.07:571,21,0	1/1:4,28:34:42.11:1085,42,0	0/1:18,0:18:51.44:112,0,51	1/1:3,32:36:42.14:1141,42,0	1/1:2,29:33:42.14:1105,42,0	1/1:14,0:13:11.33:203,11,0	1/1:23,0:23:20.25:394,20,0	1/1:8,0:8:11.83:134,12,0	1/1:2,15:20:38.85:662,39,0	1/1:2,21:23:38.49:710,38,0	1/1:0,23:23:36.12:982,36,0	1/1:2,22:25:4.33:945,4,0	1/1:2,21:23:66.13:1331,66,0	0/1:17,0:17:14.89:191,0,15	1/1:0,14:14:24.08:655,24,0
chr10	49291190	.	AC	A	4933.80	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=12.549;DP=610;FS=6.676;HRun=5;HaplotypeScore=60.2408;InbreedingCoeff=0.9935;MQ=88.94;MQ0=0;MQRankSum=-2.995;QD=31.03;ReadPosRankSum=3.744;VQSLOD=5.4971;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,17:24:63.15:695,63,0	1/1:2,5:7:12.03:136,12,0	0/0:25,0:25:72.24:0,72,984	0/0:23,0:23:56.96:0,57,696	0/0:20,0:20:54.06:0,54,678	0/0:28,0:28:84.27:0,84,1133	0/0:19,0:19:51.17:0,51,698	0/0:32,0:32:87.25:0,87,1177	0/0:19,0:19:51.17:0,51,697	0/0:20,0:20:57.18:0,57,767	0/0:20,0:20:57.18:0,57,763	1/1:1,26:27:78.22:885,78,0	1/1:2,11:13:36.10:408,36,0	0/0:22,0:22:66.22:0,66,903	1/1:0,31:31:90.26:1021,90,0	0/0:28,0:28:78.23:0,78,1035	0/0:23,0:23:66.20:0,66,885	0/0:27,0:27:81.20:0,81,1083	0/0:22,0:22:63.20:0,63,847	0/0:25,0:25:72.15:0,72,960	0/0:20,0:20:57.19:0,57,779	1/1:0,20:20:57.03:614,57,0	1/1:0,22:22:63.11:698,63,0	1/1:2,13:15:42.12:476,42,0	0/0:20,0:20:60.19:0,60,804	0/0:21,0:21:63.20:0,63,845	0/0:30,0:30:84.27:0,84,1133	0/0:7,0:7:18.06:0,18,246
chr10	49291275	.	CTT	C	7373.80	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=13.304;DP=673;FS=1.439;HRun=4;HaplotypeScore=86.0043;InbreedingCoeff=0.9973;MQ=79.21;MQ0=0;MQRankSum=-0.755;QD=42.62;ReadPosRankSum=3.909;VQSLOD=4.0140;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,22:22:63.21:928,63,0	1/1:0,12:12:36.12:530,36,0	0/0:20,0:20:55.67:0,56,1005	0/0:19,0:19:42.11:0,42,729	0/0:33,0:33:96.33:0,96,1798	0/0:40,0:40:99:0,117,2192	0/0:15,0:15:45.15:0,45,839	0/0:32,0:32:96.32:0,96,1756	0/0:17,0:17:51.17:0,51,950	0/0:26,0:26:78.27:0,78,1461	0/0:23,0:23:66.23:0,66,1236	1/1:1,19:20:60.20:883,60,0	1/1:0,23:23:69.23:1016,69,0	0/0:15,0:15:42.14:0,42,761	1/1:3,32:35:99:1457,99,0	0/0:33,0:33:99:0,99,1855	0/0:33,0:33:96.33:0,96,1799	0/0:24,0:24:69.22:0,69,1258	0/0:28,0:28:81.27:0,81,1475	0/0:31,0:31:93.32:0,93,1742	0/0:31,0:31:90.31:0,90,1674	1/1:2,18:20:57.19:838,57,0	1/1:2,13:15:42.14:617,42,0	1/1:1,25:26:75.25:1104,75,0	0/0:19,0:19:57.20:0,57,1060	0/0:26,0:26:75.26:0,75,1402	0/0:30,0:30:90.31:0,90,1686	0/0:5,0:5:15.05:0,15,281
chr10	49293138	.	AT	A	6796.61	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=16.099;DP=660;FS=4.541;HRun=7;HaplotypeScore=85.3403;InbreedingCoeff=0.9832;MQ=75.42;MQ0=0;MQRankSum=-1.696;QD=26.97;ReadPosRankSum=2.094;VQSLOD=5.5796;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,105,1301	0/0:10,0:10:30.10:0,30,377	0/0:18,0:18:45.08:0,45,542	0/0:12,0:13:6.45:0,6,251	1/1:2,33:35:96.21:979,96,0	0/0:24,0:24:66.21:0,66,829	0/0:21,1:22:35.56:0,36,734	1/1:6,27:33:81.15:818,81,0	0/0:22,0:22:60.18:0,60,742	1/1:3,33:36:96.21:974,96,0	1/1:1,19:20:57.13:582,57,0	0/0:26,0:26:72.23:0,72,905	0/0:20,0:20:57.16:0,57,694	1/1:2,24:26:57.12:582,57,0	0/0:31,0:31:84.23:0,84,1008	0/0:28,0:28:81.24:0,81,995	1/1:0,26:26:75.17:765,75,0	1/1:0,12:12:36.08:367,36,0	0/0:22,0:22:47.14:0,47,293	0/0:33,0:33:89.32:0,89,638	0/0:13,0:13:32.70:0,33,227	0/0:21,0:21:60.17:0,60,729	0/0:24,0:24:66.21:0,66,830	0/0:18,0:18:42.12:0,42,514	1/1:1,25:26:66.15:673,66,0	1/1:2,31:33:90.12:904,90,0	0/0:25,0:25:74.41:0,74,526	1/1:0,5:5:15.03:153,15,0
chr10	49294503	.	G	GA	7709.82	PASS	AB=0.909;AC=21;AF=0.375;AN=56;BaseQRankSum=10.699;DP=754;FS=4.338;HRun=9;HaplotypeScore=91.4221;InbreedingCoeff=0.9231;MQ=79.32;MQ0=0;MQRankSum=-2.336;QD=25.03;ReadPosRankSum=0.942;VQSLOD=5.2737;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:42:99:0,112,935	0/0:13,0:13:32.98:0,33,286	0/0:24,0:24:56.39:0,56,464	0/1:18,2:20:15.95:16,0,245	1/1:4,30:35:90.08:977,90,0	0/0:26,0:26:59.96:0,60,521	0/0:17,0:18:50.02:0,50,423	1/1:5,25:30:78.18:841,78,0	0/0:23,0:23:65.99:0,66,573	1/1:5,29:35:67.17:958,67,0	1/1:1,23:24:69.19:763,69,0	0/0:26,0:26:71.98:0,72,625	0/0:32,0:32:86.95:0,87,749	1/1:13,23:36:76.72:819,77,0	0/0:31,0:31:80.94:0,81,696	0/0:19,0:19:53.97:0,54,465	1/1:3,30:33:78.21:863,78,0	1/1:3,12:15:14.85:344,15,0	0/0:20,0:21:49.99:0,50,419	0/0:38,0:38:98.95:0,99,856	0/0:16,0:16:38.97:0,39,339	0/0:33,0:33:83.96:0,84,729	0/0:39,0:39:99:0,102,886	0/0:11,0:11:32.98:0,33,283	1/1:5,25:31:69.02:744,69,0	1/1:5,27:32:81.21:888,81,0	0/0:34,0:33:89.97:0,90,781	1/1:2,15:17:45.12:498,45,0
chr10	49295103	.	ACAGG	A	9070.99	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=13.495;DP=634;FS=7.229;HRun=0;HaplotypeScore=110.6289;InbreedingCoeff=0.9840;MQ=92.67;MQ0=1;MQRankSum=-5.397;QD=45.81;ReadPosRankSum=2.130;VQSLOD=5.2563;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,99,2653	0/0:15,0:15:45.15:0,45,1231	0/0:29,0:29:87.28:0,87,2139	0/0:28,0:27:75.05:0,75,1959	1/1:1,26:27:63.22:1221,63,0	0/0:20,0:20:60.19:0,60,1554	0/0:26,0:26:75.26:0,75,2055	1/1:0,30:30:90.29:1708,90,0	0/0:24,0:24:72.25:0,72,1958	1/1:4,23:27:72.25:1378,72,0	1/1:1,20:20:42.14:814,42,0	0/0:22,0:22:66.21:0,66,1729	0/0:26,0:26:75.26:0,75,2054	1/1:1,17:18:39.13:756,39,0	0/0:28,0:28:81.28:0,81,2219	0/0:35,0:35:99:0,105,2845	1/1:0,27:27:57.20:1105,57,0	1/1:2,10:12:24.08:465,24,0	0/0:26,0:26:72.25:0,72,1929	0/0:20,0:20:60.21:0,60,1622	0/0:19,0:19:57.17:0,57,1502	0/0:18,0:18:51.18:0,51,1397	0/0:14,0:14:39.12:0,39,1011	0/0:17,0:17:45.15:0,45,1181	1/1:3,18:21:39.13:756,39,0	1/1:0,13:13:39.13:752,39,0	0/0:34,0:34:99:0,102,2788	1/1:0,2:2:6.02:116,6,0
chr10	49295781	.	AC	A	15436.11	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=17.543;DP=833;FS=1.094;HRun=1;HaplotypeScore=83.9401;InbreedingCoeff=0.9994;MQ=83.11;MQ0=0;MQRankSum=-2.921;QD=39.38;ReadPosRankSum=5.246;VQSLOD=5.2231;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,45:45:99:1803,129,0	1/1:0,13:13:39.13:545,39,0	0/0:27,0:27:74.86:0,75,1155	0/0:21,0:21:55.53:0,56,833	0/0:31,0:31:93.32:0,93,1483	0/0:24,0:24:72.25:0,72,1137	0/0:38,0:38:99:0,114,1793	0/0:40,0:40:99:0,117,1843	0/0:33,0:33:99:0,99,1559	0/0:39,0:39:99:0,117,1813	0/0:27,0:27:81.28:0,81,1288	1/1:0,33:33:93.31:1299,93,0	1/1:0,39:39:99:1590,114,0	0/0:27,0:27:75.24:0,75,1168	1/1:0,34:34:96.32:1342,96,0	1/1:0,27:27:81.27:1133,81,0	0/0:48,0:48:99:0,144,2301	0/0:23,0:23:66.22:0,66,1037	1/1:0,26:26:74.87:1031,75,0	1/1:0,31:31:87.17:1170,87,0	1/1:0,27:27:81.27:1133,81,0	1/1:0,38:38:99:1464,106,0	1/1:0,18:18:42.12:587,42,0	1/1:0,30:30:81.27:1133,81,0	0/0:20,0:20:60.20:0,60,957	0/0:35,1:36:66.40:0,66,1637	1/1:0,31:31:87.29:1207,87,0	0/0:7,0:7:21.07:0,21,336
chr10	49296047	.	CT	C	9525.70	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=17.950;DP=844;FS=6.423;HRun=3;HaplotypeScore=79.7088;InbreedingCoeff=0.9976;MQ=69.91;MQ0=0;MQRankSum=-1.571;QD=34.51;ReadPosRankSum=2.158;VQSLOD=5.5119;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,117,1680	0/0:10,0:10:30.09:0,30,413	0/0:26,0:27:77.59:0,78,1029	0/0:24,0:24:67.44:0,67,894	1/1:0,36:36:99:1220,99,0	0/0:43,0:43:99:0,126,1796	0/0:32,0:32:93.31:0,93,1332	1/1:2,37:39:99:1362,111,0	0/0:27,0:27:81.27:0,81,1165	1/1:0,27:27:81.24:990,81,0	1/1:0,24:24:69.22:855,69,0	0/0:34,0:34:99:0,102,1468	0/0:25,0:25:75.24:0,75,1060	1/1:0,36:36:99:1221,99,0	0/0:51,0:51:99:0,151,2157	0/0:32,0:32:96.28:0,96,1313	1/1:0,23:23:66.21:818,66,0	1/1:0,26:26:69.22:855,69,0	0/0:21,0:21:60.17:0,60,840	0/0:40,0:40:99:0,117,1685	0/0:47,0:47:99:0,138,1960	0/0:27,0:27:75.72:0,76,1080	0/0:16,0:16:48.16:0,48,689	0/0:36,0:36:99:0,105,1511	1/1:0,19:19:51.14:632,51,0	1/1:2,38:40:99:1385,114,0	0/0:37,0:37:99:0,108,1555	1/1:1,5:6:15.05:186,15,0
chr10	49297387	.	AGGTGTCCG	A	5002.56	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=9.219;DP=592;FS=20.564;HRun=0;HaplotypeScore=174.4849;InbreedingCoeff=0.9976;MQ=85.16;MQ0=0;MQRankSum=-11.575;QD=62.53;ReadPosRankSum=2.331;VQSLOD=3.5838;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,132,5755	0/0:13,0:13:36.12:0,36,1559	0/0:22,0:22:63.22:0,63,2528	0/0:27,0:27:69.20:0,69,2570	0/0:24,0:24:48.16:0,48,2045	0/0:16,0:16:48.16:0,48,2144	0/0:29,0:29:87.30:0,87,3723	0/0:36,0:36:99:0,105,4378	0/0:17,0:17:51.18:0,51,2272	0/0:18,0:18:51.18:0,51,2244	0/0:18,0:18:45.15:0,45,1930	0/0:21,0:21:60.21:0,60,2656	0/0:27,0:27:72.25:0,72,3168	0/0:23,0:23:66.23:0,66,2925	0/0:26,0:26:78.27:0,78,3379	0/0:21,0:21:63.20:0,63,2690	0/0:17,0:17:51.18:0,51,2280	0/0:21,0:21:63.22:0,63,2735	1/1:0,13:13:39.11:1017,39,0	1/1:4,19:22:39.13:1118,39,0	1/1:3,16:19:33.11:889,33,0	0/0:16,0:16:48.16:0,48,2126	0/0:16,0:16:39.13:0,39,1736	0/0:16,0:16:48.16:0,48,2121	0/0:18,0:18:51.18:0,51,2256	0/0:19,0:18:57.20:0,57,2535	1/1:1,24:25:69.24:1978,69,0	0/0:6,0:6:18.06:0,18,799
chr10	49297687	.	G	GT	6676.30	PASS	AB=0.913;AC=44;AF=0.786;AN=56;BaseQRankSum=8.393;DP=728;FS=6.164;HRun=9;HaplotypeScore=189.7121;InbreedingCoeff=0.5505;MQ=55.33;MQ0=19;MQRankSum=-7.762;QD=10.82;ReadPosRankSum=1.626;VQSLOD=2.2603;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:20,22:42:53.16:765,53,0	1/1:6,2:7:14.01:163,14,0	0/0:41,0:21:19.95:0,20,243	0/1:44,0:19:8.16:8,0,110	1/1:20,5:39:44.85:412,45,0	0/0:22,0:20:62.99:0,63,547	0/0:29,1:29:74.55:0,75,631	1/1:33,5:38:29.20:225,29,0	0/0:17,0:17:41.99:0,42,364	1/1:13,5:22:39.22:278,39,0	1/1:13,6:27:43.39:292,43,0	1/1:10,12:20:28.23:503,28,0	1/1:12,13:24:46.37:493,46,0	1/1:16,2:26:38:281,38,0	1/1:6,20:27:68.58:716,69,0	0/1:17,0:18:18.58:19,0,20	1/1:17,1:22:1.47:125,1,0	1/1:17,2:23:23.09:169,23,0	0/1:30,0:28:12.83:13,0,54	1/1:19,0:23:17.55:77,18,0	1/1:9,0:9:5.21:32,5,0	1/1:15,11:26:60.02:561,60,0	1/1:12,15:29:57.58:599,58,0	1/1:14,10:22:24.87:336,25,0	1/1:3,4:19:29.31:205,29,0	1/1:13,3:25:23.29:231,23,0	0/1:20,0:26:6.18:87,0,6	1/1:5,1:6:9.01:86,9,0
chr10	49297694	.	TTTG	T	1865.21	PASS	AB=0.982;AC=18;AF=0.321;AN=56;BaseQRankSum=-5.657;DP=721;FS=23.900;HRun=0;HaplotypeScore=220.7807;InbreedingCoeff=-0.3286;MQ=49.81;MQ0=21;MQRankSum=-2.544;QD=4.54;ReadPosRankSum=-11.212;VQSLOD=-0.6173;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:7.12:0,7,359	0/0:12,0:11:13.89:0,14,82	0/0:43,0:18:34.36:0,34,508	0/0:42,0:14:22.20:0,22,279	0/1:45,2:44:99:297,0,183	0/0:23,0:21:63.19:0,63,1137	0/0:33,0:32:78.50:0,79,1311	0/1:29,2:31:44.85:243,0,45	0/0:15,0:15:42.09:0,42,705	0/1:22,1:21:68.43:68,0,210	0/1:24,1:25:99:211,0,106	0/1:22,0:20:52.16:52,0,161	0/0:24,0:23:23.99:0,24,217	0/1:28,1:29:99:188,0,135	0/0:28,0:27:6.18:0,6,216	0/1:19,0:18:39.11:39,0,145	0/1:25,1:24:73.44:151,0,73	0/1:25,0:23:80.39:189,0,80	0/1:28,0:25:99:143,0,118	0/1:18,0:17:54.66:55,0,173	0/1:8,0:7:10.57:11,0,26	0/1:26,0:24:71.12:97,0,71	0/0:28,0:28:22.45:0,22,161	0/1:23,0:21:32.93:33,0,91	0/0:21,0:20:17.88:0,18,188	0/1:27,1:28:99:166,0,148	0/1:27,0:25:9.28:9,0,176	1/1:6,0:6:11.18:76,11,0
chr10	49297696	.	TG	T	5174.62	PASS	AB=1.000;AC=45;AF=0.804;AN=56;BaseQRankSum=9.928;DP=704;FS=4.009;HRun=1;HaplotypeScore=191.4179;InbreedingCoeff=0.7830;MQ=48.92;MQ0=21;MQRankSum=-7.567;QD=9.39;ReadPosRankSum=0.947;VQSLOD=2.6756;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:39,0:40:33.14:228,33,0	1/1:12,0:11:21.88:104,22,0	0/0:43,0:18:29.92:0,30,306	0/0:39,0:12:13.47:0,13,173	1/1:45,1:43:82.46:550,82,0	0/0:24,0:22:66.12:0,66,721	0/0:32,0:31:80.85:0,81,850	1/1:24,3:27:44.40:338,44,0	0/0:15,0:15:42.06:0,42,452	1/1:14,9:21:3.49:241,3,0	1/1:24,1:25:62.79:328,63,0	1/1:21,0:19:31.47:215,31,0	1/1:23,0:22:3.42:100,3,0	1/1:23,6:29:58.57:325,59,0	1/1:28,1:28:40.38:241,40,0	0/1:20,0:19:5.28:142,0,5	1/1:23,2:23:11:192,11,0	1/1:22,1:21:49.56:353,50,0	1/1:27,0:24:1.71:235,2,0	1/1:17,0:16:31.33:179,31,0	1/1:8,0:7:15.30:76,15,0	1/1:26,0:24:55.63:292,56,0	1/1:28,0:28:42.76:208,43,0	1/1:22,0:20:29.29:133,29,0	1/1:20,1:20:12.34:114,12,0	1/1:24,2:26:32.43:279,32,0	1/1:27,0:25:35.27:203,35,0	1/1:1,5:6:14.82:100,15,0
chr10	49297697	.	G	GT	6027.66	PASS	AB=0.714;AC=45;AF=0.804;AN=56;BaseQRankSum=10.348;DP=710;FS=0.488;HRun=9;HaplotypeScore=196.1145;InbreedingCoeff=0.8513;MQ=47.88;MQ0=21;MQRankSum=-9.472;QD=10.74;ReadPosRankSum=-0.006;VQSLOD=1.9780;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:22,21:43:77.57:733,78,0	1/1:9,3:11:23.36:242,23,0	0/0:42,0:18:8.56:0,9,212	0/0:37,0:11:8.54:0,9,99	1/1:16,1:44:65.88:341,66,0	0/0:24,0:22:60.03:0,60,548	0/0:31,0:30:62.50:0,62,574	1/1:21,0:27:23.44:110,23,0	0/0:15,0:15:33.02:0,33,301	1/1:16,0:22:30.01:142,30,0	1/1:14,0:24:34.80:162,35,0	1/1:9,8:17:38.57:374,39,0	1/1:10,13:23:42.59:396,43,0	1/1:15,0:30:37.38:174,37,0	1/1:11,18:28:53.28:545,53,0	1/1:15,0:19:15.03:58,15,0	0/1:15,0:23:4.19:76,0,4	1/1:13,1:20:27.81:183,28,0	1/1:21,6:25:29.06:268,29,0	1/1:11,4:16:19.35:177,19,0	1/1:6,2:7:8.97:81,9,0	1/1:10,16:25:50.45:488,50,0	1/1:14,15:29:37.34:400,37,0	1/1:13,11:22:19.52:308,20,0	1/1:10,0:20:31.70:152,32,0	1/1:9,1:26:40.55:212,41,0	1/1:13,13:26:43.57:376,44,0	1/1:6,0:6:7.63:31,8,0
chr10	49297705	.	TC	T	1935.34	PASS	AB=0.976;AC=31;AF=0.554;AN=56;BaseQRankSum=3.653;DP=656;FS=1.151;HRun=1;HaplotypeScore=193.0149;InbreedingCoeff=0.0583;MQ=45.05;MQ0=22;MQRankSum=-6.317;QD=3.82;ReadPosRankSum=-1.994;VQSLOD=-0.6652;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:40,0:39:12.63:176,0,13	1/1:14,0:13:20.03:95,20,0	0/0:37,0:16:26.86:0,27,345	0/1:33,1:9:6.81:7,0,115	0/1:45,0:42:84.78:85,0,252	0/0:22,0:20:60.09:0,60,683	0/0:30,0:29:73.09:0,73,763	0/1:22,0:21:93.30:93,0,102	0/0:14,0:14:38.85:0,39,396	0/1:24,0:22:76.12:115,0,76	0/1:23,0:23:47.87:48,0,138	1/1:20,0:18:22.51:117,23,0	1/1:22,0:21:25.50:127,26,0	0/1:27,0:27:73.17:73,0,79	1/1:25,1:25:22.34:195,22,0	1/1:23,0:22:22.03:128,22,0	0/0:25,0:23:2.75:0,3,115	0/1:20,0:18:58.90:59,0,121	0/1:20,0:18:6.39:156,0,6	1/1:14,1:14:4.98:64,5,0	1/1:8,0:7:6.33:32,6,0	1/1:22,0:20:24.27:173,24,0	0/1:15,3:18:31.97:32,0,38	0/1:21,0:19:2.64:74,0,3	0/0:21,0:20:10.39:0,10,84	0/1:28,0:26:66.65:67,0,136	1/1:29,0:27:22.71:155,23,0	0/1:5,1:6:7.06:48,0,7
chr10	49297706	.	C	CT	3671.87	PASS	AB=1.000;AC=28;AF=0.500;AN=56;BaseQRankSum=2.821;DP=663;FS=0.000;HRun=8;HaplotypeScore=192.9035;InbreedingCoeff=0.7480;MQ=45.34;MQ0=22;MQRankSum=-5.057;QD=11.16;ReadPosRankSum=-1.884;VQSLOD=0.5749;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:15,27:41:51.88:523,52,0	1/1:3,11:13:18.52:199,19,0	0/0:35,0:15:20.59:0,21,193	0/0:30,1:9:2.70:0,3,56	0/0:46,0:43:20.89:0,21,343	0/0:23,0:21:51.02:0,51,467	0/0:30,0:29:56.86:0,57,520	0/0:21,0:20:14.85:0,15,146	0/0:14,0:14:30.01:0,30,274	0/0:24,0:22:19.04:0,19,134	0/1:23,0:23:12.31:12,0,171	1/1:8,13:19:33.06:308,33,0	1/1:8,14:21:35.44:361,35,0	0/0:27,0:27:0.09:0,0,123	1/1:15,12:26:44.37:452,44,0	1/1:13,10:22:17.94:176,18,0	0/0:25,0:23:19.35:0,19,157	0/0:20,0:18:23.52:0,24,208	1/1:16,4:18:19.32:178,19,0	1/1:10,5:14:16.81:166,17,0	1/1:5,3:7:3.01:33,3,0	1/1:8,13:22:40.97:379,41,0	1/1:9,9:18:21.96:185,22,0	1/1:6,15:19:25.26:273,25,0	0/1:21,0:20:19.49:19,0,94	0/0:29,0:27:30.72:0,31,256	1/1:14,16:28:41.94:407,42,0	0/0:6,0:6:4.45:0,4,33
chr10	49297927	.	A	AG	7328.85	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=12.400;DP=744;FS=19.452;HRun=5;HaplotypeScore=93.9234;InbreedingCoeff=0.9976;MQ=61.48;MQ0=0;MQRankSum=0.304;QD=30.04;ReadPosRankSum=-0.870;VQSLOD=2.9164;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,131,1380	0/0:13,0:13:36.07:0,36,378	0/0:32,0:27:78.13:0,78,812	0/0:30,0:21:51.06:0,51,533	1/1:3,21:24:51.10:647,51,0	0/0:21,0:21:57.14:0,57,611	0/0:28,0:28:81.17:0,81,848	1/1:6,30:34:60.12:740,60,0	0/0:24,0:24:69.17:0,69,740	1/1:3,18:20:54.15:679,54,0	1/1:1,15:16:42.13:540,42,0	0/0:29,0:29:84.21:0,84,901	0/0:27,0:27:75.19:0,75,805	1/1:2,39:41:93.26:1204,93,0	0/0:39,0:38:99:0,102,1065	0/0:32,0:31:84.21:0,84,902	1/1:2,24:26:61.11:860,61,0	1/1:1,27:29:84.17:1069,84,0	0/0:21,0:20:48.07:0,48,496	0/0:30,0:30:81.20:0,81,867	0/0:27,0:27:78.17:0,78,822	0/0:22,0:22:54.11:0,54,572	0/0:21,0:21:51.13:0,51,546	0/0:28,0:28:75.19:0,75,806	1/1:3,12:15:33.11:434,33,0	1/1:3,27:30:78.16:959,78,0	0/0:30,0:30:81.17:0,81,858	1/1:0,6:6:15.05:197,15,0
chr10	49298609	.	TA	T	885.12	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=5.996;DP=280;FS=6.824;HRun=7;HaplotypeScore=32.7863;InbreedingCoeff=0.8425;MQ=62.66;MQ0=2;MQRankSum=-0.644;QD=20.12;ReadPosRankSum=1.248;VQSLOD=2.3922;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,12:13:25.32:277,25,0	1/1:0,4:4:12.03:122,12,0	0/0:27,0:10:1.28:0,1,234	0/0:25,0:16:7.53:0,8,284	0/0:12,0:12:36.12:0,36,453	0/0:14,0:14:36.10:0,36,441	0/0:7,0:7:18.06:0,18,226	0/0:29,0:29:78.21:0,78,964	0/0:7,0:7:15.05:0,15,188	0/0:15,0:15:45.13:0,45,553	0/0:11,0:10:30.10:0,30,376	1/1:0,5:5:15.03:153,15,0	1/1:0,6:6:18.04:184,18,0	0/0:6,0:6:18.04:0,18,212	1/1:0,7:7:18.04:184,18,0	0/0:6,0:6:18.06:0,18,226	0/0:14,0:14:22.95:0,23,437	0/0:9,0:9:27.07:0,27,322	0/0:9,0:9:27.04:0,27,322	0/0:5,0:5:15.05:0,15,188	0/0:5,0:5:12.04:0,12,151	1/1:0,4:4:9.02:92,9,0	1/1:0,3:3:2.99:31,3,0	1/1:0,2:2:3.01:31,3,0	0/0:15,0:15:45.14:0,45,565	0/0:9,0:9:27.09:0,27,340	0/0:5,0:5:15.05:0,15,189	0/0:4,0:4:9.03:0,9,113
chr10	49298713	.	A	AC	13667.38	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-10.811;DP=569;FS=4.259;HRun=1;HaplotypeScore=59.3372;InbreedingCoeff=0.9998;MQ=83.51;MQ0=0;MQRankSum=-4.472;QD=41.54;ReadPosRankSum=1.341;VQSLOD=5.4452;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:93.27:0,93,1177	0/0:14,0:14:36.12:0,36,467	0/0:19,0:19:54.16:0,54,686	0/0:15,0:15:42.10:0,42,520	1/1:0,20:20:60.20:896,60,0	0/0:21,0:21:63.20:0,63,818	0/0:17,0:17:48.16:0,48,623	1/1:2,32:34:93.32:1394,93,0	0/0:18,0:18:54.18:0,54,701	1/1:0,18:18:54.13:746,54,0	1/1:0,13:13:36.12:540,36,0	0/0:24,0:24:69.22:0,69,896	0/0:22,0:22:63.20:0,63,818	1/1:0,15:15:39.13:584,39,0	0/0:19,0:19:57.19:0,57,739	1/1:0,24:24:72.24:1079,72,0	1/1:0,38:38:99:1573,105,0	1/1:0,21:22:63.21:939,63,0	1/1:1,20:21:63.16:892,63,0	1/1:0,19:19:54.10:758,54,0	1/1:1,30:31:78.26:1169,78,0	0/0:15,0:15:42.14:0,42,545	0/0:11,0:11:30.10:0,30,389	0/0:12,0:12:33.11:0,33,428	1/1:0,16:16:39.13:585,39,0	1/1:0,24:24:72.19:1031,72,0	1/1:0,22:22:66.22:988,66,0	1/1:0,12:12:33.11:494,33,0
chr10	49299402	.	GT	G	1746.26	PASS	AB=0.985;AC=27;AF=0.482;AN=56;BaseQRankSum=13.556;DP=496;FS=8.880;HRun=1;HaplotypeScore=92.5926;InbreedingCoeff=0.3041;MQ=82.93;MQ0=0;MQRankSum=-5.813;QD=5.90;ReadPosRankSum=6.548;VQSLOD=0.1381;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:25,1:26:38.12:230,38,0	1/1:11,0:11:7.10:83,7,0	0/0:21,0:21:48.47:0,48,843	0/0:14,0:14:30.10:0,30,435	0/1:12,0:12:35.40:44,0,35	0/0:24,0:24:43.24:0,43,771	0/0:26,0:26:69.16:0,69,910	0/1:32,0:32:71.72:72,0,102	0/0:16,0:16:43.79:0,44,625	0/1:11,0:11:15.20:15,0,76	1/1:17,1:18:12.69:143,13,0	0/1:17,0:17:34.61:60,0,35	0/1:16,0:16:51.23:78,0,51	1/1:18,0:18:44.69:201,45,0	1/1:12,1:13:4.85:105,5,0	0/0:20,0:20:54.13:0,54,714	0/1:25,0:25:8.97:172,0,9	0/1:12,1:13:13.16:128,0,13	0/0:17,0:17:48.15:0,48,676	0/0:21,0:21:63.11:0,63,776	0/0:17,0:17:42.08:0,42,552	1/1:19,1:20:22.31:170,22,0	0/1:13,1:14:39.37:82,0,39	1/1:18,0:18:40.96:183,41,0	0/1:12,0:12:40.28:59,0,40	1/1:15,1:16:3.33:87,3,0	0/0:24,0:24:57.19:0,57,821	1/1:4,0:4:9.18:31,9,0
chr10	49299403	.	TG	T	7906.52	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=6.200;DP=501;FS=9.999;HRun=6;HaplotypeScore=77.8940;InbreedingCoeff=0.9940;MQ=82.56;MQ0=0;MQRankSum=-6.201;QD=26.36;ReadPosRankSum=3.154;VQSLOD=4.8775;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,24:26:72.18:770,72,0	1/1:1,10:11:26.59:290,27,0	0/0:21,0:21:59.76:0,60,740	0/0:14,0:14:33.04:0,33,395	1/1:3,10:13:24.06:258,24,0	0/0:24,0:24:57.17:0,57,735	0/0:25,0:25:63.18:0,63,800	1/1:6,25:31:75.18:806,75,0	0/0:17,0:17:45.13:0,45,576	1/1:6,5:11:21.01:225,21,0	1/1:2,16:18:42.10:448,42,0	1/1:4,13:17:42:435,42,0	1/1:4,12:16:36.09:387,36,0	1/1:1,17:18:54.14:579,54,0	1/1:2,11:13:33.08:354,33,0	0/0:20,0:20:42.14:0,42,551	1/1:3,22:25:66.16:707,66,0	1/1:4,10:14:33.06:344,33,0	0/0:18,0:18:48.16:0,48,626	0/0:21,0:21:45.15:0,45,589	0/0:17,0:17:36.12:0,36,471	1/1:2,18:20:54.14:579,54,0	1/1:5,10:15:33.07:343,33,0	1/1:1,18:19:47.86:514,48,0	1/1:4,9:13:27.07:290,27,0	1/1:3,13:16:41.94:449,42,0	0/0:24,0:24:57.16:0,57,732	1/1:0,4:4:12.03:129,12,0
chr10	49299422	.	GC	G	920.84	PASS	AB=0.968;AC=12;AF=0.214;AN=56;BaseQRankSum=-4.897;DP=454;FS=1.848;HRun=11;HaplotypeScore=98.0508;InbreedingCoeff=0.5333;MQ=73.73;MQ0=0;MQRankSum=0.695;QD=6.48;ReadPosRankSum=1.840;VQSLOD=2.3325;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:26:44.84:0,45,408	0/0:11,0:11:12.02:0,12,121	0/1:19,0:16:3.81:4,0,74	0/1:9,0:10:14.51:15,0,21	0/0:7,0:9:11.76:0,12,78	0/0:21,3:24:20.44:0,20,402	0/1:23,2:25:2.25:2,0,562	0/0:19,0:26:31.87:0,32,196	0/0:13,0:14:35.88:0,36,338	0/0:4,0:6:2.84:0,3,14	0/0:15,0:20:23.75:0,24,180	0/0:14,0:14:24.01:0,24,222	0/0:14,0:14:30.03:0,30,300	0/0:18,0:21:23.53:0,24,163	0/0:12,0:12:21.03:0,21,210	0/0:8,0:14:4.61:0,5,18	0/0:17,0:24:55.71:0,56,390	0/0:7,0:11:26.26:0,26,169	1/1:3,11:14:29.81:231,30,0	1/1:2,15:17:32.04:249,32,0	1/1:0,15:16:35:277,35,0	0/0:16,0:16:30.04:0,30,293	0/0:13,1:15:2.21:0,2,194	0/1:17,1:18:6.62:7,0,336	0/0:8,0:11:20.54:0,21,152	0/0:16,0:20:35.26:0,35,246	1/1:6,16:23:37.98:301,38,0	0/0:4,0:4:2.97:0,3,20
chr10	49299725	.	CT	C	8183.81	PASS	AB=1.000;AC=37;AF=0.661;AN=56;BaseQRankSum=9.363;DP=613;FS=13.711;HRun=10;HaplotypeScore=67.8345;InbreedingCoeff=0.8479;MQ=65.13;MQ0=0;MQRankSum=-0.228;QD=19.67;ReadPosRankSum=3.014;VQSLOD=4.8184;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,35:39:69.29:826,69,0	1/1:1,4:5:9:78,9,0	0/0:6,0:6:8.79:0,9,68	0/1:8,0:6:12.06:12,0,90	1/1:1,27:28:69.42:596,69,0	0/0:24,2:27:16.48:0,16,595	0/0:22,1:23:34.09:0,34,595	1/1:16,18:34:53.92:463,54,0	0/0:17,0:17:48.13:0,48,531	1/1:8,19:27:59.77:501,60,0	1/1:2,21:23:47.80:405,48,0	1/1:5,33:38:70.78:782,71,0	1/1:3,30:33:80.88:702,81,0	1/1:0,15:15:38.99:339,39,0	1/1:1,17:18:44.99:391,45,0	0/0:26,0:26:72.18:0,72,786	1/1:4,18:22:11.81:331,12,0	1/1:0,22:22:62.99:547,63,0	0/0:26,2:28:8.04:0,8,537	0/0:30,0:30:75.09:0,75,775	0/0:18,2:21:3.52:0,4,443	1/1:4,15:19:41.94:363,42,0	1/1:2,19:21:44.66:390,45,0	1/1:0,23:23:65.99:573,66,0	1/1:2,14:16:41.99:364,42,0	1/1:3,18:21:53.97:468,54,0	0/0:18,1:19:25.08:0,25,497	1/1:2,2:4:6:52,6,0
chr10	49300925	.	A	AAAAC	10174.88	PASS	AB=0.654;AC=21;AF=0.375;AN=56;BaseQRankSum=-14.544;DP=799;FS=10.308;HRun=0;HaplotypeScore=157.1060;InbreedingCoeff=0.9029;MQ=61.59;MQ0=2;MQRankSum=8.684;QD=30.74;ReadPosRankSum=1.632;VQSLOD=4.5710;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:40:22.59:0,23,219	0/0:5,0:10:12.48:0,12,113	0/0:29,0:20:12.01:0,12,162	0/0:32,0:23:8.99:0,9,110	1/1:8,14:24:45.15:1041,45,0	0/0:24,0:24:39.12:0,39,588	0/0:22,0:22:30.09:0,30,445	1/1:25,0:25:12.03:190,12,0	1/1:21,15:39:11.17:823,11,0	1/1:18,19:38:60.21:1367,60,0	1/1:12,15:27:45.15:1000,45,0	0/0:19,0:40:54.06:0,54,503	0/0:13,0:25:27.03:0,27,250	0/1:16,16:34:4.79:880,0,5	0/0:8,0:24:40.66:0,41,347	0/0:15,0:32:43.61:0,44,394	1/1:13,26:41:60.21:1419,60,0	1/1:15,17:32:42.14:993,42,0	0/0:29,0:30:45.14:0,45,664	0/0:23,0:24:39.10:0,39,549	0/0:30,0:31:42.10:0,42,572	0/0:12,0:25:13.26:0,13,115	0/0:12,0:29:31.59:0,32,235	0/0:14,0:21:8.78:0,9,83	1/1:13,8:21:21.07:494,21,0	1/1:18,17:37:57.15:1256,57,0	0/0:30,0:30:39.12:0,39,588	1/1:3,10:13:30.10:710,30,0
chr10	49302319	.	T	TGTGTTTCCGAGTTACGTCGC	87666.70	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=1.613;DP=972;FS=21.822;HRun=0;HaplotypeScore=520.3551;InbreedingCoeff=0.9956;MQ=67.60;MQ0=4;MQRankSum=-20.929;QD=134.87;ReadPosRankSum=1.545;VQSLOD=4.2842;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:30,9:39:95.20:5185,95,0	1/1:10,0:10:18.06:916,18,0	0/0:35,0:33:82.52:0,83,3571	0/0:47,0:43:99:0,111,4237	1/1:30,8:38:54.66:2526,55,0	0/0:30,0:30:84.29:0,84,3955	0/0:38,0:38:99:0,102,4550	1/1:49,0:46:99:6271,126,0	0/0:46,0:46:99:0,126,6402	1/1:47,19:65:99:13090,165,0	1/1:22,9:31:80.98:4381,81,0	1/1:32,9:40:93.24:5636,93,0	1/1:27,7:34:78.25:4906,78,0	1/1:33,14:47:99:6723,102,0	1/1:32,6:38:90.25:5404,90,0	1/1:35,13:45:99:6759,111,0	1/1:12,2:14:33.11:1910,33,0	1/1:8,0:8:21.07:1217,21,0	0/0:23,0:22:60.21:0,60,2660	0/0:22,0:22:60.21:0,60,3155	0/0:50,0:50:99:0,120,5412	1/1:35,9:44:99:5148,105,0	1/1:21,8:29:72.17:3619,72,0	1/1:26,7:32:38.37:2369,38,0	1/1:20,12:32:71.82:5088,72,0	1/1:33,8:41:84:5402,84,0	0/0:31,0:31:90.31:0,90,4406	1/1:4,1:5:15.05:1114,15,0
chr10	49302347	.	ATGTG	A	2884.17	PASS	AB=0.727;AC=7;AF=0.125;AN=56;BaseQRankSum=-4.414;DP=961;FS=3.719;HRun=0;HaplotypeScore=383.3238;InbreedingCoeff=0.7427;MQ=48.15;MQ0=9;MQRankSum=6.959;QD=19.75;ReadPosRankSum=5.042;VQSLOD=2.6955;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:33.11:0,33,559	0/0:6,0:6:18.06:0,18,304	0/0:46,0:24:18.06:0,18,396	0/0:47,0:26:18.06:0,18,346	0/0:14,0:33:4.59:0,5,93	0/0:28,0:31:68.92:0,69,1583	0/0:46,0:49:72.82:0,73,2536	0/0:48,0:42:73.81:0,74,954	0/0:45,0:49:99:0,107,2394	0/0:26,0:56:57.51:0,58,801	0/0:18,0:19:7.92:0,8,73	0/0:37,0:35:59.83:0,60,948	0/0:32,0:32:77.78:0,78,1262	0/0:38,0:51:20.47:0,20,348	0/0:45,0:45:83.55:0,84,1355	0/0:36,0:39:33.85:0,34,403	0/0:11,0:14:17.48:0,17,220	0/0:5,0:6:11.09:0,11,166	0/1:10,5:16:45.68:156,0,46	1/1:7,16:23:26.84:442,27,0	1/1:25,47:72:75.76:1530,76,0	0/0:32,0:32:38.71:0,39,631	0/0:16,0:16:14.80:0,15,206	0/0:38,0:37:44.30:0,44,739	0/0:21,0:26:8.76:0,9,113	0/0:25,0:48:71.12:0,71,941	1/1:14,21:35:56.88:904,57,0	0/0:3,0:7:17.93:0,18,246
chr10	49302348	.	T	TG	9309.93	PASS	AB=0.922;AC=29;AF=0.518;AN=56;BaseQRankSum=5.516;DP=958;FS=12.233;HRun=1;HaplotypeScore=356.0968;InbreedingCoeff=0.5960;MQ=47.99;MQ0=9;MQRankSum=-10.187;QD=17.18;ReadPosRankSum=-1.839;VQSLOD=1.3049;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,22:33:50.59:561,51,0	1/1:0,6:6:18.06:260,18,0	0/0:45,0:23:60.10:0,60,732	0/0:50,0:28:51.19:0,51,733	0/0:30,2:33:5.90:0,6,44	0/0:31,0:31:81.58:0,82,997	0/0:47,0:47:99:0,135,1693	1/1:36,12:42:33.39:1308,33,0	0/0:49,0:49:99:0,136,1673	1/1:56,1:55:32.38:973,32,0	0/0:16,2:20:12.73:0,13,77	1/1:12,25:35:61.67:847,62,0	1/1:7,26:33:65.09:1105,65,0	0/1:45,5:51:78.45:303,0,78	1/1:9,37:46:90.03:1172,90,0	0/1:33,9:39:33.22:508,0,33	0/1:13,1:14:38.03:132,0,38	0/1:6,0:6:44.11:44,0,63	0/0:15,0:15:38.69:0,39,391	0/0:23,0:23:41.16:0,41,334	0/0:69,0:69:99:0,122,881	1/1:9,24:34:44.10:567,44,0	1/1:11,5:16:13.47:144,13,0	1/1:4,34:37:46.49:570,46,0	1/1:22,3:25:11.72:203,12,0	0/1:46,2:46:88.99:496,0,89	0/0:34,0:34:79.79:0,80,617	1/1:8,0:8:4.25:117,4,0
chr10	49302349	.	GT	G	3200.78	PASS	AB=0.810;AC=17;AF=0.304;AN=56;BaseQRankSum=7.991;DP=935;FS=56.837;HRun=1;HaplotypeScore=322.3948;InbreedingCoeff=-0.2757;MQ=48.12;MQ0=9;MQRankSum=-10.471;QD=6.17;ReadPosRankSum=-4.073;VQSLOD=-0.7056;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:27,5:32:36.83:61,0,37	0/0:6,0:6:7.17:0,7,22	0/0:45,0:23:66.12:0,66,858	0/0:49,0:27:72.13:0,72,903	0/0:27,4:31:6.46:0,6,83	0/0:31,0:31:82.79:0,83,1216	0/0:47,0:47:99:0,135,1994	0/1:19,27:40:99:920,0,208	0/0:49,0:49:99:0,135,1952	0/1:44,9:51:99:643,0,305	0/0:10,9:19:14.66:0,15,134	0/1:26,8:33:67.75:146,0,68	0/1:27,5:32:91.46:133,0,91	0/1:30,20:50:99:194,0,115	0/1:37,7:44:48.57:161,0,49	0/1:23,19:40:99:381,0,122	0/1:10,4:14:35.05:35,0,113	0/1:5,1:6:24.96:25,0,150	0/0:15,0:15:31.96:0,32,365	0/0:23,0:23:23.47:0,23,209	0/0:69,0:69:60.47:0,60,452	0/1:30,6:36:36.14:49,0,36	0/1:9,8:17:0.66:74,0,1	0/1:35,4:37:33.67:34,0,84	1/1:12,12:24:1.61:152,2,0	0/1:37,5:40:99:326,0,333	0/0:32,0:32:43.49:0,43,366	0/1:7,1:8:23.25:23,0,56
chr10	49302389	.	GT	G	1354.04	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=9.710;DP=903;FS=7.574;HRun=1;HaplotypeScore=275.5631;InbreedingCoeff=0.8480;MQ=53.05;MQ0=6;MQRankSum=-9.108;QD=6.91;ReadPosRankSum=-0.633;VQSLOD=-0.0528;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:41.97:0,42,575	0/0:12,0:12:21.02:0,21,306	0/0:45,0:36:99:0,108,1654	0/0:50,0:36:93.87:0,94,1546	1/1:22,0:22:8.22:37,8,0	0/0:29,0:29:78.24:0,78,1199	0/0:51,0:51:99:0,147,2258	1/1:25,0:25:46.58:260,47,0	0/0:54,0:54:99:0,150,2316	1/1:31,0:31:26.20:374,26,0	1/1:10,0:10:7.99:37,8,0	0/0:39,0:39:70.98:0,71,1085	0/0:38,0:38:81.01:0,81,1201	1/1:49,3:52:15.31:175,15,0	0/0:46,0:46:89.94:0,90,1370	0/0:34,0:32:29.57:0,30,411	1/1:11,0:11:21.37:126,21,0	1/1:8,0:8:4.02:108,4,0	0/0:29,0:28:84.21:0,84,1264	0/0:25,0:25:57.15:0,57,879	0/0:84,0:84:99:0,184,2888	0/0:31,0:31:38.93:0,39,581	0/0:21,0:21:23.84:0,24,377	0/0:35,0:34:50.70:0,51,789	0/0:17,1:18:3.40:0,3,18	1/1:31,0:31:43.94:401,44,0	0/0:33,0:33:93.18:0,93,1451	0/1:6,0:6:8.59:32,0,9
chr10	49302390	.	TG	T	4181.93	PASS	AB=0.563;AC=19;AF=0.339;AN=56;BaseQRankSum=7.635;DP=901;FS=6.679;HRun=3;HaplotypeScore=265.8860;InbreedingCoeff=0.9457;MQ=53.22;MQ0=6;MQRankSum=-9.440;QD=19.73;ReadPosRankSum=-0.498;VQSLOD=1.9229;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:33.54:0,34,447	0/0:12,0:12:18.06:0,18,259	0/0:47,0:39:99:0,117,1587	0/0:48,0:36:82.64:0,83,1331	1/1:2,19:21:9.01:112,9,0	0/0:29,0:29:75.25:0,75,1072	0/0:51,0:51:99:0,141,1972	1/1:1,24:25:72.23:892,72,0	0/0:53,0:53:99:0,147,2088	1/1:4,27:31:84.26:1039,84,0	1/1:1,9:10:8.79:111,9,0	0/0:40,0:40:74.49:0,74,1000	0/0:38,0:38:95.96:0,96,1204	1/1:17,34:51:35.91:411,36,0	0/0:46,0:46:99:0,99,1281	0/0:34,0:33:29.99:0,30,376	1/1:1,9:11:22.31:262,22,0	1/1:1,7:8:21.07:257,21,0	0/0:28,0:28:78.23:0,78,1081	0/0:24,0:24:54.16:0,54,758	0/0:84,0:84:99:0,184,2623	0/0:30,0:30:35.98:0,36,494	0/0:21,0:21:26.71:0,27,360	0/0:35,0:34:50.83:0,51,669	0/1:4,14:18:0.01:0,0,0	1/1:3,28:31:81.22:985,81,0	0/0:34,0:34:93.25:0,93,1315	1/1:2,4:6:10.58:111,11,0
chr10	49302429	.	GTGTGCA	G	12759.13	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=14.035;DP=949;FS=45.629;HRun=0;HaplotypeScore=269.6415;InbreedingCoeff=0.8760;MQ=51.56;MQ0=9;MQRankSum=-14.970;QD=25.27;ReadPosRankSum=1.449;VQSLOD=3.0327;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:17,14:31:21.64:432,22,0	1/1:4,5:9:9.03:173,9,0	0/0:66,0:38:73.65:0,74,1626	0/0:61,0:41:74.92:0,75,1625	1/1:6,11:17:8.90:162,9,0	0/0:28,0:28:57.20:0,57,1756	0/0:50,0:50:99:0,129,3978	1/1:33,10:42:63.15:1183,63,0	0/0:56,0:56:99:0,138,4454	1/1:12,26:38:96.29:1951,96,0	1/1:5,15:19:8.92:193,9,0	1/1:20,17:36:48.16:974,48,0	1/1:11,17:27:59.85:1232,60,0	1/1:12,33:46:47.43:1002,47,0	1/1:18,13:31:45.15:957,45,0	1/1:6,37:43:82.52:1688,83,0	1/1:3,11:14:12.76:259,13,0	1/1:4,4:8:12.04:258,12,0	0/0:23,0:23:51.17:0,51,1558	0/0:30,0:30:72.18:0,72,2315	0/0:92,0:92:99:0,189,5966	1/1:14,8:21:11.06:242,11,0	1/1:9,13:22:2.91:65,3,0	1/1:26,6:31:2.77:45,3,0	1/1:1,30:31:26.76:523,27,0	1/1:8,20:28:63.22:1356,63,0	0/0:36,0:36:72.25:0,72,2332	1/1:2,3:5:2.41:63,2,0
chr10	49302433	.	GCA	G	2964.12	PASS	AB=0.954;AC=21;AF=0.375;AN=56;BaseQRankSum=16.575;DP=954;FS=50.897;HRun=0;HaplotypeScore=250.4076;InbreedingCoeff=-0.1179;MQ=52.14;MQ0=7;MQRankSum=-16.415;QD=6.29;ReadPosRankSum=4.706;VQSLOD=1.5392;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:23,5:28:19.85:128,20,0	0/1:10,0:10:40.15:57,0,40	0/0:65,2:42:4.45:0,4,1762	0/0:62,1:45:97.44:0,97,1979	0/1:16,0:16:1.04:25,0,1	0/0:26,0:26:69.24:0,69,1310	0/0:50,0:50:99:0,151,2924	0/1:37,5:41:99:431,0,547	0/0:57,0:57:99:0,163,3143	0/1:39,1:40:99:408,0,209	0/1:19,0:18:38.38:38,0,89	0/1:35,3:37:99:287,0,107	0/1:25,3:27:19.67:238,0,20	0/1:43,0:43:51.72:196,0,52	0/1:26,3:29:99:268,0,235	1/1:41,0:41:29.34:398,29,0	0/1:14,0:14:19.33:52,0,19	0/1:8,0:8:29.86:30,0,134	0/0:26,0:26:78.26:0,78,1411	0/0:31,0:31:78.18:0,78,1546	0/0:100,0:100:99:0,244,4654	0/1:20,2:21:11.64:79,0,12	0/0:21,0:21:1.93:0,2,190	0/1:25,7:31:69.91:70,0,224	1/1:30,0:30:25.54:166,26,0	0/1:25,1:26:51.29:259,0,51	0/0:39,0:39:99:0,108,2012	0/1:5,0:5:5.44:5,0,48
chr10	49302602	.	G	GCA	5302.70	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=14.382;DP=1072;FS=2.745;HRun=0;HaplotypeScore=255.0128;InbreedingCoeff=0.9755;MQ=59.94;MQ0=0;MQRankSum=-6.263;QD=21.73;ReadPosRankSum=7.081;VQSLOD=4.5056;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,24:39:62.96:1070,63,0	1/1:1,6:7:12.02:179,12,0	0/0:47,0:39:99:0,111,1666	0/0:54,0:47:99:0,122,1848	0/0:35,0:35:54.13:0,54,827	0/0:32,0:32:87.24:0,87,1339	0/0:47,0:47:99:0,141,2275	0/0:50,0:49:99:0,144,2204	0/0:40,0:40:99:0,111,1779	0/0:58,0:58:99:0,162,2544	0/0:32,0:32:57.05:0,57,905	1/1:14,34:50:80.67:1350,81,0	1/1:12,31:43:62.71:1003,63,0	0/0:58,0:58:99:0,100,1607	1/1:1,32:37:45.47:784,45,0	0/0:57,0:57:99:0,126,2026	0/0:31,0:31:87.27:0,87,1378	0/0:27,0:27:78.19:0,78,1201	0/0:23,0:23:69.24:0,69,1119	0/0:32,0:32:90.23:0,90,1406	0/0:96,0:96:99:0,277,4377	1/1:2,22:24:17.80:314,18,0	1/1:0,12:13:6.01:105,6,0	1/1:8,19:28:29.13:497,29,0	0/0:23,0:23:60.20:0,60,978	0/0:43,0:43:99:0,120,1952	0/0:29,0:29:75.18:0,75,1140	0/0:14,0:14:39.12:0,39,611
chr10	49302715	.	TGTG	T	2509.46	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=10.829;DP=955;FS=2.263;HRun=0;HaplotypeScore=234.2146;InbreedingCoeff=0.8133;MQ=55.80;MQ0=21;MQRankSum=-9.121;QD=9.47;ReadPosRankSum=-0.069;VQSLOD=2.9385;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:16,10:25:3.01:62,3,0	1/1:6,5:11:9.03:130,9,0	0/0:68,0:31:18.70:0,19,627	0/0:81,0:37:47.99:0,48,840	0/0:18,0:18:3.01:0,3,48	0/0:23,0:23:36.12:0,36,706	0/0:44,0:43:98.03:0,98,1930	0/0:25,0:25:48.16:0,48,914	0/0:27,0:27:50.42:0,50,1003	0/0:49,0:49:93.32:0,93,1838	0/0:17,0:17:3.01:0,3,61	1/1:31,22:51:31.80:506,32,0	1/1:27,28:53:83.39:1187,83,0	0/0:28,0:28:36.04:0,36,651	1/1:26,27:51:43.76:591,44,0	0/0:31,0:31:69.20:0,69,1328	0/0:30,0:30:75.26:0,75,1503	0/0:19,0:19:42.10:0,42,742	0/0:18,0:18:33.10:0,33,587	0/0:12,0:11:9.37:0,9,99	0/0:100,0:100:99:0,132,2586	1/1:24,8:29:10.98:175,11,0	0/0:10,2:11:3.87:0,4,62	1/1:26,9:33:5.93:38,6,0	0/0:26,0:26:18.52:0,19,333	0/0:32,0:32:45.14:0,45,829	0/0:19,0:19:33.33:0,33,549	0/0:7,0:7:6.02:0,6,123
chr10	49302738	.	AGTGTGT	A	2225.42	PASS	AB=0.827;AC=16;AF=0.308;AN=52;BaseQRankSum=2.100;DP=940;FS=3.968;HRun=0;HaplotypeScore=236.5562;InbreedingCoeff=0.6534;MQ=45.26;MQ0=61;MQRankSum=-5.406;QD=11.02;ReadPosRankSum=0.729;VQSLOD=2.7027;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:31:12.04:0,12,385	0/0:8,0:9:9.03:0,9,227	0/0:99,0:16:2.98:0,3,21	0/0:104,0:20:9:0,9,214	./.	0/1:13,1:14:43.36:43,0,462	0/0:42,0:42:48.16:0,48,1399	1/1:19,6:20:11.98:167,12,0	0/0:24,0:26:44.49:0,44,1213	1/1:24,13:38:33.07:561,33,0	1/1:6,4:10:2.77:61,3,0	0/0:53,0:54:41.26:0,41,1083	0/0:57,0:56:28.19:0,28,557	1/1:15,16:31:24.34:492,24,0	0/0:49,0:46:20.61:0,21,672	0/0:17,0:32:57.18:0,57,1478	1/1:22,7:30:12.04:226,12,0	0/1:11,6:17:99:322,0,168	0/0:16,0:20:24.55:0,25,642	0/0:5,0:15:1.82:0,2,123	0/0:74,0:76:63.32:0,63,1371	0/0:32,0:30:17.59:0,18,527	0/0:16,0:15:2.88:0,3,91	0/0:37,0:38:25.87:0,26,624	1/1:9,9:17:12.04:246,12,0	1/1:12,4:17:15.05:288,15,0	0/0:8,0:17:23.22:0,23,373	./.
chr10	49303106	.	GA	G	8640.87	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=13.311;DP=655;FS=5.091;HRun=1;HaplotypeScore=66.1195;InbreedingCoeff=0.9950;MQ=82.70;MQ0=0;MQRankSum=-6.696;QD=38.40;ReadPosRankSum=1.228;VQSLOD=5.4881;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,147,2318	0/0:8,0:8:24.08:0,24,381	0/0:19,0:19:41.74:0,42,806	0/0:17,0:17:43.96:0,44,656	1/1:0,13:13:33.11:461,33,0	0/0:28,0:28:81.25:0,81,1249	0/0:31,0:31:93.30:0,93,1458	1/1:0,25:25:75.22:1013,75,0	0/0:16,0:16:48.15:0,48,739	1/1:0,13:13:39.13:545,39,0	1/1:0,12:12:30.10:419,30,0	0/0:29,0:29:87.30:0,87,1386	0/0:29,0:29:87.28:0,87,1363	1/1:0,23:23:60.20:839,60,0	0/0:24,0:24:72.25:0,72,1145	0/0:16,0:16:48.16:0,48,767	1/1:0,37:37:99:1510,108,0	1/1:0,36:36:99:1380,99,0	0/0:16,0:16:48.16:0,48,743	0/0:16,0:16:45.14:0,45,697	0/0:48,0:48:99:0,141,2248	0/0:18,0:18:54.18:0,54,863	0/0:18,0:18:48.16:0,48,766	0/0:28,0:28:84.27:0,84,1319	1/1:0,31:31:81.27:1132,81,0	1/1:0,29:29:87.24:1175,87,0	0/0:19,0:19:57.19:0,57,909	1/1:0,6:6:12.04:168,12,0
chr10	49306171	.	GTA	G	12636.78	PASS	AB=0.528;AC=35;AF=0.625;AN=56;BaseQRankSum=20.069;DP=690;FS=4.702;HRun=0;HaplotypeScore=154.9296;InbreedingCoeff=0.9303;MQ=92.64;MQ0=0;MQRankSum=-9.022;QD=30.75;ReadPosRankSum=4.470;VQSLOD=6.7675;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,114,2073	1/1:1,6:8:21.05:235,21,0	0/0:32,0:32:87.05:0,87,1582	0/0:37,0:37:99:0,102,1638	1/1:1,16:18:48.12:533,48,0	0/0:18,0:18:54.17:0,54,999	0/0:28,0:28:84.23:0,84,1507	1/1:6,23:29:87.16:951,87,0	0/0:30,0:30:90.25:0,90,1634	1/1:0,27:27:75.21:874,75,0	1/1:2,13:16:45.10:495,45,0	1/1:3,25:28:78.19:860,78,0	1/1:3,17:20:60.13:652,60,0	1/1:4,17:22:60.13:683,60,0	1/1:6,21:27:72.20:845,72,0	1/1:6,27:33:81.23:948,81,0	1/1:3,18:21:57.16:662,57,0	1/1:3,28:31:87.26:1030,87,0	0/0:16,0:15:48.15:0,48,851	0/0:26,0:26:75.24:0,75,1406	0/0:29,0:29:84.24:0,84,1501	1/1:0,17:21:51.08:567,51,0	1/1:4,10:14:36.08:403,36,0	0/1:2,17:19:9.76:490,0,10	1/1:3,24:27:75.20:852,75,0	1/1:2,33:35:99:1116,102,0	0/0:24,0:24:72.23:0,72,1345	1/1:3,12:15:39.10:442,39,0
chr10	49306175	.	GTA	G	10767.79	PASS	AB=0.553;AC=35;AF=0.625;AN=56;BaseQRankSum=20.855;DP=680;FS=2.011;HRun=0;HaplotypeScore=161.7291;InbreedingCoeff=0.9359;MQ=93.70;MQ0=0;MQRankSum=-13.827;QD=26.65;ReadPosRankSum=4.328;VQSLOD=5.6763;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,114,2042	1/1:1,6:7:21.03:214,21,0	0/0:32,0:33:91.88:0,92,1490	0/0:34,0:35:99:0,99,1602	1/1:1,16:18:46.15:419,46,0	0/0:18,0:18:54.17:0,54,941	0/0:29,0:29:84.29:0,84,1499	1/1:8,23:31:77.51:742,78,0	0/0:28,0:28:84.29:0,84,1530	1/1:4,24:28:75.05:758,75,0	1/1:2,13:16:43.11:382,43,0	1/1:1,25:26:78.11:778,78,0	1/1:4,17:21:56.99:553,57,0	1/1:4,16:21:57.03:567,57,0	1/1:1,21:22:65.65:689,66,0	1/1:2,27:29:81.16:851,81,0	1/1:5,18:23:56.47:604,56,0	1/1:6,28:34:84.64:885,85,0	0/0:14,0:13:42.14:0,42,759	0/0:26,0:26:78.27:0,78,1393	0/0:29,0:29:81.28:0,81,1484	1/1:4,17:21:49.51:446,50,0	1/1:4,10:14:38.48:336,38,0	0/1:4,17:21:6.88:428,0,7	1/1:0,24:24:70.47:669,70,0	1/1:0,36:36:99:1064,108,0	0/0:24,0:24:72.22:0,72,1275	1/1:0,12:12:36.09:382,36,0
chr10	49307929	.	TCAGTGCTCCCGAAAACCCAG	T	2279.87	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.309;DP=663;FS=2.294;HRun=0;HaplotypeScore=337.3427;InbreedingCoeff=0.8812;MQ=80.78;MQ0=0;MQRankSum=-6.312;QD=94.99;ReadPosRankSum=1.129;VQSLOD=2.9424;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,154,14233	0/0:3,0:3:9.03:0,9,836	0/0:20,0:20:60.02:0,60,2537	0/0:17,0:17:45.12:0,45,2317	0/0:23,0:22:63.21:0,63,5800	0/0:30,0:30:87.28:0,87,7382	0/0:34,0:34:99:0,99,7467	0/0:23,0:23:66.22:0,66,4935	0/0:19,0:19:57.13:0,57,4673	0/0:23,0:23:66.21:0,66,5223	0/0:10,0:10:27.09:0,27,2561	0/0:28,0:28:84.27:0,84,7481	0/0:36,0:36:99:0,105,8583	0/0:26,0:26:72.25:0,72,5969	0/0:19,0:19:57.20:0,57,5029	1/1:2,22:24:42.14:2375,42,0	0/0:34,0:34:99:0,102,8688	0/0:32,0:32:93.30:0,93,7778	0/0:25,0:25:72.25:0,72,5936	0/0:9,0:9:27.08:0,27,2282	0/0:63,0:63:99:0,187,15767	0/0:20,0:20:57.13:0,57,3596	0/0:12,0:12:33.10:0,33,2897	0/0:37,0:37:99:0,108,9723	0/0:6,0:6:15.05:0,15,1438	0/0:22,0:22:63.22:0,63,5692	0/0:13,0:13:36.11:0,36,2399	0/0:3,0:3:9.03:0,9,665
chr10	49310810	.	CATATATAT	C	345.96	PASS	AB=0.943;AC=7;AF=0.250;AN=28;BaseQRankSum=1.058;DP=224;FS=1.440;HRun=0;HaplotypeScore=45.5857;InbreedingCoeff=0.2223;MQ=37.93;MQ0=13;MQRankSum=-1.058;QD=4.27;ReadPosRankSum=2.151;VQSLOD=1.3365;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:20,0:20:29.17:29,0,105	./.	./.	0/0:4,0:3:2.53:0,3,52	0/0:4,0:4:3.01:0,3,97	0/1:13,0:13:63.57:64,0,105	1/1:7,0:6:3.01:37,3,0	0/0:28,0:23:36.04:0,36,925	0/0:8,0:8:6.38:0,6,59	0/0:7,0:4:6.02:0,6,219	./.	0/0:8,0:7:7.82:0,8,306	0/0:6,0:6:3.01:0,3,93	./.	./.	0/0:8,0:8:0.47:0,0,1	0/1:12,1:14:1.12:130,0,1	1/1:12,12:24:9.88:189,10,0	./.	./.	./.	./.	./.	./.	./.	./.	./.	0/0:9,0:9:21.07:0,21,581
chr10	49314332	.	A	AG	20362.92	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-13.724;DP=723;FS=4.569;HRun=4;HaplotypeScore=67.3997;InbreedingCoeff=0.9983;MQ=89.51;MQ0=0;MQRankSum=-5.562;QD=36.49;ReadPosRankSum=4.052;VQSLOD=5.1921;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:72.20:0,72,809	1/1:1,11:12:33.11:447,33,0	0/0:29,0:29:52.75:0,53,658	0/0:24,0:25:65.18:0,65,740	1/1:1,25:26:72.24:983,72,0	0/0:27,0:27:78.21:0,78,874	0/0:30,0:30:87.16:0,87,951	1/1:2,35:37:99:1383,105,0	0/0:27,0:27:78.20:0,78,865	1/1:2,29:31:90.27:1203,90,0	1/1:4,26:30:78.17:1021,78,0	1/1:1,30:32:87.02:1158,87,0	1/1:3,21:24:60.20:821,60,0	1/1:1,22:23:57.19:780,57,0	1/1:1,35:36:96.32:1313,96,0	1/1:0,39:39:99:1518,111,0	1/1:2,26:28:75.25:1026,75,0	1/1:0,20:20:57.19:780,57,0	1/1:1,11:12:33.11:451,33,0	1/1:2,16:18:45.15:615,45,0	1/1:1,31:32:90.30:1230,90,0	1/1:0,23:23:66.22:898,66,0	1/1:1,25:26:60.20:818,60,0	1/1:3,24:27:66.22:903,66,0	1/1:2,24:26:69.23:944,69,0	1/1:1,26:27:78.24:1048,78,0	1/1:1,20:20:57.19:779,57,0	1/1:0,8:8:18.06:246,18,0
chr10	49314336	.	G	GT	7719.05	PASS	AB=1.000;AC=43;AF=0.768;AN=56;BaseQRankSum=14.521;DP=715;FS=4.875;HRun=3;HaplotypeScore=109.9121;InbreedingCoeff=0.8515;MQ=88.79;MQ0=0;MQRankSum=-6.602;QD=13.96;ReadPosRankSum=6.010;VQSLOD=3.9752;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:75:0,75,857	1/1:11,1:12:31.99:204,32,0	0/0:25,0:25:72.07:0,72,808	0/0:27,0:27:75:0,75,833	1/1:26,0:26:46.53:407,47,0	0/0:28,0:28:75.23:0,75,898	0/0:29,0:29:78.21:0,78,910	1/1:37,0:37:92:486,92,0	0/0:27,0:27:75.21:0,75,886	1/1:29,1:30:81.89:433,82,0	1/1:28,2:30:54.81:460,55,0	1/1:31,0:31:80.94:455,81,0	1/1:21,0:21:58.18:335,58,0	1/1:22,0:22:34.27:287,34,0	1/1:38,0:38:26.62:423,27,0	1/1:39,0:39:99:571,107,0	1/1:26,0:26:53.34:371,53,0	1/1:20,0:20:55.01:307,55,0	0/1:16,0:16:36.53:128,0,37	1/1:17,0:17:3.35:206,3,0	1/1:32,0:32:63.64:489,64,0	1/1:24,0:24:63.67:367,64,0	1/1:26,0:26:34.61:332,35,0	1/1:27,0:27:6.42:289,6,0	1/1:24,0:24:66.25:361,66,0	1/1:26,0:26:71.46:388,71,0	1/1:21,0:20:55.36:323,55,0	1/1:8,0:8:17.43:98,17,0
chr10	49314666	.	T	TCA	15203.56	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-16.845;DP=768;FS=7.830;HRun=0;HaplotypeScore=87.3174;InbreedingCoeff=0.9998;MQ=79.49;MQ0=4;MQRankSum=-1.717;QD=48.27;ReadPosRankSum=3.031;VQSLOD=6.0376;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,129,1896	1/1:1,12:13:27.09:505,27,0	0/0:30,0:30:81.25:0,81,1159	0/0:27,0:26:70.42:0,70,953	0/0:25,0:25:75.24:0,75,1084	0/0:30,0:30:84.27:0,84,1216	0/0:26,0:26:78.26:0,78,1146	0/0:31,0:31:87.29:0,87,1280	0/0:30,0:30:63.30:0,63,1213	0/0:32,0:32:87.29:0,87,1281	0/0:21,0:21:60.18:0,60,845	1/1:1,24:25:66.23:1236,66,0	1/1:0,26:26:78.27:1459,78,0	0/0:35,0:35:99:0,102,1481	1/1:3,32:34:81.28:1517,81,0	1/1:2,30:32:84.27:1573,84,0	0/0:34,0:34:90.28:0,90,1325	0/0:21,0:21:60.17:0,60,851	1/1:3,12:15:36.05:556,36,0	1/1:0,23:24:66.23:1224,66,0	1/1:0,23:23:69.24:1292,69,0	1/1:3,25:27:69.24:1292,69,0	1/1:0,23:22:60.21:1123,60,0	1/1:1,46:46:99:2174,117,0	0/0:26,0:26:78.26:0,78,1147	0/0:28,0:28:78.25:0,78,1116	1/1:2,22:24:69.17:1253,69,0	0/0:13,0:13:39.13:0,39,574
chr10	49315711	.	C	CAGAGAG	1421.70	PASS	AB=1.000;AC=19;AF=0.432;AN=44;BaseQRankSum=0.726;DP=578;FS=0.000;HRun=0;HaplotypeScore=149.0018;InbreedingCoeff=0.4363;MQ=74.52;MQ0=26;MQRankSum=-0.898;QD=6.24;ReadPosRankSum=-2.305;VQSLOD=1.9555;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:26:20.24:0,20,273	1/1:15,0:14:6.48:61,6,0	./.	./.	0/0:6,0:5:3.01:0,3,59	1/1:16,0:14:6.98:211,7,0	0/1:24,0:23:9.90:199,0,10	0/0:32,0:31:2.92:0,3,17	1/1:28,0:25:15.52:317,16,0	0/0:12,0:12:6.02:0,6,92	./.	1/1:15,6:21:2.84:44,3,0	1/1:15,0:15:0.47:1,0,0	0/0:23,0:23:15.04:0,15,247	1/1:32,0:30:5.79:82,6,0	0/1:19,0:19:26.56:70,0,27	0/0:25,0:25:33.44:0,33,654	0/0:19,0:18:21.03:0,21,384	0/0:13,0:15:9.03:0,9,122	./.	./.	1/1:11,0:11:9.03:146,9,0	./.	1/1:25,0:24:18.06:430,18,0	0/0:15,0:15:3.01:0,3,59	0/1:21,0:19:12.19:12,0,53	0/0:10,0:12:3.01:0,3,42	0/0:11,0:10:7.75:0,8,180
chr10	49315758	.	AGTGTGTGTGT	A	2447.66	PASS	AB=0.790;AC=12;AF=0.250;AN=48;BaseQRankSum=0.090;DP=508;FS=1.998;HRun=0;HaplotypeScore=139.8512;InbreedingCoeff=0.5392;MQ=42.55;MQ0=41;MQRankSum=-1.070;QD=15.79;ReadPosRankSum=0.364;VQSLOD=2.9223;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:38:30.10:0,30,1175	0/0:7,0:6:6.02:0,6,278	0/0:1,0:1:3.01:0,3,90	./.	./.	0/0:16,0:11:9.48:0,9,181	0/0:25,0:20:21.48:0,21,460	0/1:22,4:22:30.05:201,0,30	0/0:21,0:18:18.16:0,18,319	1/1:8,6:13:20.96:579,21,0	./.	0/0:30,0:27:42.62:0,43,1718	0/0:20,0:18:17.98:0,18,481	./.	0/0:24,0:20:15.51:0,16,599	1/1:13,1:19:10.89:245,11,0	0/1:18,11:29:42.05:243,0,42	1/1:15,7:22:0.61:101,1,0	0/0:6,0:5:12.03:0,12,267	0/0:12,0:11:12.51:0,13,463	0/0:28,0:26:6.02:0,6,246	0/0:17,0:16:14.98:0,15,534	0/0:9,0:9:9.03:0,9,385	0/0:33,0:29:42.58:0,43,1398	0/0:2,8:10:0:0,0,0	1/1:11,14:22:39.10:1139,39,0	0/0:6,0:6:13.07:0,13,300	1/1:16,1:13:3.01:89,3,0
chr10	49315991	.	G	GT	1155.80	PASS	AB=0.890;AC=22;AF=0.440;AN=50;BaseQRankSum=1.773;DP=126;FS=0.000;HRun=0;HaplotypeScore=21.0546;InbreedingCoeff=0.4748;MQ=71.21;MQ0=4;MQRankSum=-0.651;QD=17.25;ReadPosRankSum=-0.461;VQSLOD=4.7120;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:4:9.03:0,9,121	1/1:0,1:1:3.01:47,3,0	0/1:5,0:5:11.78:12,0,96	0/0:6,0:4:3:0,3,41	0/0:3,0:3:9.03:0,9,126	0/0:3,0:3:3.01:0,3,42	0/1:11,1:11:41.85:42,0,284	0/0:2,0:2:6.01:0,6,57	0/0:2,0:2:6.02:0,6,84	./.	0/0:3,0:3:2.96:0,3,19	1/1:0,8:8:21.54:328,22,0	1/1:0,3:3:3.01:47,3,0	0/0:4,0:4:6.02:0,6,84	1/1:0,9:9:24.08:375,24,0	1/1:2,6:5:6.02:94,6,0	0/0:13,0:13:30.07:0,30,384	0/0:7,0:7:21.07:0,21,293	./.	./.	1/1:2,3:3:7.27:97,7,0	1/1:0,1:1:3.01:47,3,0	1/1:1,0:1:3.01:45,3,0	1/1:1,6:6:9.03:141,9,0	0/0:2,0:2:6:0,6,65	0/0:6,0:6:12.04:0,12,168	1/1:1,4:4:3.48:47,3,0	0/0:1,0:1:3.01:0,3,42
chr10	49316301	.	C	CTTTA	25133.80	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-12.778;DP=490;FS=11.323;HRun=0;HaplotypeScore=70.2484;InbreedingCoeff=0.9971;MQ=88.94;MQ0=0;MQRankSum=-6.300;QD=69.62;ReadPosRankSum=2.498;VQSLOD=6.7127;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:57.20:0,57,1082	1/1:3,7:10:27.09:646,27,0	0/0:25,0:24:61.98:0,62,1130	0/0:24,0:23:51.11:0,51,868	1/1:4,16:20:45.15:1113,45,0	0/0:29,0:29:87.30:0,87,1652	0/0:12,0:12:36.12:0,36,684	1/1:10,21:31:90.31:2355,90,0	0/0:19,0:19:57.19:0,57,1052	1/1:0,16:16:48.16:1282,48,0	1/1:2,13:15:45.15:1188,45,0	1/1:1,11:12:36.12:958,36,0	1/1:2,13:18:42:1111,42,0	1/1:1,17:20:54.18:1407,54,0	1/1:2,18:21:57.20:1523,57,0	1/1:0,15:17:38.92:1051,39,0	1/1:2,15:17:45.15:1211,45,0	1/1:1,22:25:63.22:1701,63,0	1/1:7,7:16:45.14:1108,45,0	1/1:2,10:13:33.11:833,33,0	1/1:0,13:13:39.13:959,39,0	1/1:1,13:15:39.13:1048,39,0	1/1:0,9:9:21.07:565,21,0	1/1:2,7:10:18.06:486,18,0	1/1:1,15:15:42.14:1087,42,0	1/1:1,16:17:51.17:1334,51,0	1/1:4,15:20:51.17:1359,51,0	1/1:1,9:10:30.10:809,30,0
chr10	49316503	.	T	TA	4838.46	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-2.209;DP=565;FS=0.000;HRun=8;HaplotypeScore=61.9662;InbreedingCoeff=0.9284;MQ=69.44;MQ0=0;MQRankSum=0.708;QD=20.33;ReadPosRankSum=3.424;VQSLOD=4.8273;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:74.99:0,75,669	1/1:1,8:9:23.93:243,24,0	0/0:8,0:7:11.74:0,12,90	0/0:8,0:8:1.97:0,2,48	0/0:33,0:33:90:0,90,807	0/0:28,0:28:78.03:0,78,710	0/0:22,0:22:59.97:0,60,529	0/0:34,0:34:92.96:0,93,826	0/0:24,0:24:57.03:0,57,521	0/0:17,0:17:48.02:0,48,437	0/0:16,1:17:7.42:0,7,316	1/1:4,17:21:36.11:415,36,0	1/1:3,23:26:57.17:657,57,0	0/0:16,0:16:38.97:0,39,345	1/1:3,21:24:41.64:484,42,0	1/1:1,0:13:2.34:160,2,0	0/0:33,0:35:92.02:0,92,808	0/0:16,0:16:32.99:0,33,296	1/1:5,1:25:37.88:304,38,0	1/1:2,0:20:51.25:264,51,0	1/1:2,0:13:22.73:115,23,0	1/1:0,22:22:65.86:678,66,0	1/1:2,22:24:60.18:692,60,0	1/1:4,20:24:54.16:623,54,0	0/0:16,0:16:38.95:0,39,348	0/0:17,0:17:46.23:0,46,404	1/1:2,1:17:37:204,37,0	0/0:10,0:10:29.97:0,30,266
chr10	49316971	.	AAACAACAACAAACAAC	A	1083.05	PASS	AB=0.563;AC=5;AF=0.093;AN=54;BaseQRankSum=5.951;DP=581;FS=7.051;HRun=0;HaplotypeScore=213.2643;InbreedingCoeff=0.7364;MQ=64.36;MQ0=1;MQRankSum=-4.499;QD=25.79;ReadPosRankSum=0.645;VQSLOD=2.0032;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:54.14:0,54,2487	0/0:3,0:3:9.03:0,9,364	0/0:33,0:23:42.12:0,42,1496	0/0:35,0:34:75.25:0,75,3457	0/0:12,0:12:30.10:0,30,1084	0/0:17,0:17:42.14:0,42,1915	0/0:46,0:46:99:0,129,6862	0/0:14,0:14:39.13:0,39,1609	0/0:17,0:17:36.12:0,36,1988	0/0:17,0:17:42.13:0,42,1551	0/0:2,0:2:6.02:0,6,211	0/0:30,0:30:22.68:0,23,611	0/0:37,0:37:15.76:0,16,487	0/0:40,0:40:26.96:0,27,741	0/0:22,0:22:0.59:0,1,560	0/0:34,0:34:13.51:0,14,616	0/0:24,0:24:69.21:0,69,2497	0/0:38,0:38:99:0,102,4029	1/1:6,5:11:12.04:306,12,0	./.	0/1:4,14:18:0:0,0,0	0/0:11,0:11:27.09:0,27,979	0/0:8,0:8:17.99:0,18,597	0/0:44,0:44:30.10:0,30,1014	0/0:8,0:8:21.07:0,21,880	0/0:14,0:14:36.12:0,36,1415	1/1:0,11:13:23.90:891,24,0	0/0:5,0:5:9.03:0,9,405
chr10	49316981	.	AAAC	A	2620.50	PASS	AB=1.000;AC=36;AF=0.667;AN=54;BaseQRankSum=2.614;DP=587;FS=8.098;HRun=0;HaplotypeScore=96.1850;InbreedingCoeff=0.6025;MQ=62.20;MQ0=7;MQRankSum=0.215;QD=7.78;ReadPosRankSum=3.928;VQSLOD=1.5887;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:38.94:0,39,326	1/1:3,0:3:5.97:50,6,0	0/0:38,0:24:31.19:0,31,273	0/0:37,0:33:47.16:0,47,473	1/1:11,0:11:23.63:180,24,0	0/0:15,0:15:26.97:0,27,227	0/0:53,0:52:99:0,137,1174	1/1:17,0:16:29.90:253,30,0	0/0:18,0:18:32.29:0,32,397	1/1:16,0:16:33.01:304,33,0	1/1:2,0:2:3:25,3,0	1/1:29,0:27:8.80:64,9,0	1/1:40,0:40:5.40:35,5,0	0/1:40,0:39:21.98:25,0,22	1/1:26,0:26:8.76:64,9,0	1/1:27,0:27:2.46:31,2,0	1/1:25,0:25:48.07:394,48,0	1/1:38,0:38:90.19:752,90,0	1/1:6,0:6:2.97:20,3,0	./.	0/0:18,0:18:2.99:0,3,25	0/1:10,0:9:12.02:81,0,12	1/1:8,0:7:5.93:46,6,0	0/0:49,0:48:2.50:0,2,9	1/1:9,0:8:8.99:74,9,0	1/1:7,6:12:29.85:240,30,0	1/1:14,0:14:23.37:146,23,0	1/1:3,0:3:2.99:24,3,0
chr10	49316995	.	ACAACAGCAGCAGCAG	A	3155.65	PASS	AB=1.000;AC=32;AF=0.571;AN=56;BaseQRankSum=1.239;DP=571;FS=4.182;HRun=0;HaplotypeScore=166.8450;InbreedingCoeff=0.4623;MQ=56.55;MQ0=17;MQRankSum=-0.128;QD=10.84;ReadPosRankSum=3.348;VQSLOD=2.2825;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:38.94:0,39,326	1/1:3,0:3:5.97:50,6,0	0/0:28,0:15:31.49:0,31,273	0/0:26,0:22:47.16:0,47,473	1/1:8,0:8:23.63:180,24,0	0/0:11,0:10:26.97:0,27,226	0/0:60,0:54:99:0,147,1488	1/1:17,0:16:30.37:254,30,0	0/0:21,0:20:58.33:0,58,1932	1/1:13,0:12:32.29:302,32,0	1/1:3,0:3:3:25,3,0	1/1:5,24:27:8.51:333,9,0	1/1:1,36:37:5.98:238,6,0	0/0:3,0:38:6.02:0,6,170	1/1:3,24:27:8.72:367,9,0	1/1:1,0:29:2.79:115,3,0	0/1:25,0:25:60.55:301,0,61	0/1:37,0:37:66.86:589,0,67	1/1:7,0:6:2.97:20,3,0	0/0:6,0:5:0.94:0,1,2	0/0:26,0:23:5.35:0,5,30	0/1:9,0:8:12.34:80,0,12	1/1:7,0:5:4.19:43,4,0	0/0:2,44:45:2.50:0,2,9	1/1:6,0:5:8.99:74,9,0	1/1:12,0:10:29.85:240,30,0	0/1:17,0:17:99:108,0,179	1/1:5,0:3:2.99:24,3,0
chr10	49317420	.	A	AT	2057.02	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-10.973;DP=670;FS=8.097;HRun=8;HaplotypeScore=84.9559;InbreedingCoeff=0.9952;MQ=81.86;MQ0=0;MQRankSum=-1.386;QD=26.37;ReadPosRankSum=-2.819;VQSLOD=2.8824;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,105,961	0/0:7,0:7:18.01:0,18,165	0/0:19,0:19:38.60:0,39,339	0/0:19,0:20:44.91:0,45,398	0/0:26,0:26:66.01:0,66,600	0/0:25,0:25:63.03:0,63,577	0/0:40,0:40:99:0,111,1011	0/0:33,0:33:81:0,81,730	0/0:19,0:19:50.99:0,51,460	0/0:25,0:25:69.03:0,69,629	0/0:7,0:7:21.01:0,21,192	0/0:28,0:28:72.02:0,72,654	0/0:24,0:24:66.02:0,66,599	0/0:21,0:21:54.03:0,54,494	0/0:34,0:34:93.05:0,93,851	0/0:24,0:24:60.01:0,60,549	0/0:48,0:48:99:0,141,1284	0/0:27,0:27:69.03:0,69,632	1/1:5,19:24:57.13:633,57,0	1/1:0,16:16:48.04:511,48,0	1/1:2,25:27:72.21:831,72,0	0/0:25,0:25:60.01:0,60,549	0/0:16,0:16:35.99:0,36,326	0/0:33,0:33:89.97:0,90,810	0/0:16,0:16:42.01:0,42,384	0/0:24,0:24:34.57:0,35,493	1/1:2,9:11:21.06:242,21,0	0/0:12,0:12:30.01:0,30,275
chr10	49318554	.	C	CGGAGGAA	7035.21	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-7.892;DP=674;FS=1.634;HRun=0;HaplotypeScore=147.6345;InbreedingCoeff=0.9979;MQ=92.73;MQ0=0;MQRankSum=-10.393;QD=73.28;ReadPosRankSum=-1.003;VQSLOD=5.0064;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,108,2569	0/0:7,0:7:21.07:0,21,545	0/0:27,0:27:61.15:0,61,1474	0/0:34,0:33:87.23:0,87,2024	0/0:15,0:15:42.10:0,42,1019	0/0:14,0:14:39.13:0,39,952	0/0:35,0:35:96.31:0,96,2288	0/0:22,0:22:60.19:0,60,1389	0/0:23,0:23:63.21:0,63,1558	0/0:27,0:27:72.21:0,72,1693	0/0:15,0:15:42.59:0,43,973	0/0:33,0:33:96.28:0,96,2397	0/0:22,0:22:60.21:0,60,1544	0/0:33,0:33:87.26:0,87,2097	0/0:36,0:36:99:0,102,2443	0/0:29,0:29:81.28:0,81,2088	0/0:28,0:28:81.28:0,81,2101	0/0:32,0:32:90.31:0,90,2246	1/1:4,6:23:66.20:1826,66,0	1/1:4,10:17:36.12:1353,36,0	1/1:6,16:32:54.19:2037,54,0	0/0:11,0:11:27.09:0,27,728	0/0:8,0:8:24.08:0,24,644	0/0:36,0:35:96.27:0,96,2345	0/0:19,0:19:57.17:0,57,1392	0/0:14,0:14:39.13:0,39,982	1/1:0,14:24:45.15:1820,45,0	0/0:18,0:18:51.17:0,51,1174
chr10	49319192	.	TAA	T	1695.69	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=3.692;DP=627;FS=4.836;HRun=15;HaplotypeScore=92.9509;InbreedingCoeff=0.9166;MQ=71.97;MQ0=1;MQRankSum=-0.160;QD=11.38;ReadPosRankSum=6.253;VQSLOD=2.7803;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:36:77.08:0,77,725	1/1:4,5:10:14.75:121,15,0	0/0:29,0:18:6.87:0,7,266	0/0:13,0:10:2.88:0,3,15	0/0:28,0:29:50.99:0,51,489	0/0:23,0:23:42.96:0,43,531	0/0:18,0:25:50.87:0,51,565	0/0:21,0:23:32.06:0,32,345	0/0:15,0:16:23.51:0,24,245	0/0:18,0:21:12.15:0,12,385	0/0:24,0:24:47.50:0,48,519	1/1:5,19:25:15.64:279,16,0	1/1:4,13:18:32.70:276,33,0	0/0:19,0:23:51.11:0,51,607	1/1:4,17:24:6.37:311,6,0	0/0:11,0:30:35.41:0,35,189	0/0:25,1:27:46.41:0,46,777	0/0:21,0:21:58.41:0,58,724	0/0:9,0:19:40.73:0,41,421	0/0:3,0:21:53.45:0,53,491	0/0:3,0:10:18.02:0,18,178	1/1:7,18:25:40.69:373,41,0	1/1:6,13:19:14.03:131,14,0	1/1:11,17:28:33.91:396,34,0	0/0:21,0:24:52.85:0,53,592	0/0:17,0:21:37.74:0,38,397	0/0:14,0:32:41.17:0,41,419	0/0:10,0:10:16.29:0,16,185
chr10	49319983	.	TTCTTTTC	T	5041.88	PASS	AB=1.000;AC=24;AF=0.429;AN=56;BaseQRankSum=6.827;DP=537;FS=0.789;HRun=0;HaplotypeScore=173.6430;InbreedingCoeff=0.5767;MQ=61.29;MQ0=1;MQRankSum=-6.581;QD=18.81;ReadPosRankSum=-2.980;VQSLOD=4.1194;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,141,5257	0/0:5,0:5:10.03:0,10,65	0/0:20,0:14:39.60:0,40,1029	0/0:33,0:19:53.67:0,54,1560	1/1:21,0:21:41.69:489,42,0	0/0:21,0:21:63.19:0,63,2089	0/0:31,0:31:90.29:0,90,3393	1/1:30,3:33:37.55:887,38,0	0/0:18,0:18:51.18:0,51,1897	1/1:21,1:22:51.46:633,51,0	1/1:24,2:26:62.80:771,63,0	0/0:15,0:15:32.25:0,32,274	0/0:12,0:12:29.07:0,29,319	1/1:13,0:13:18.02:222,18,0	0/1:28,0:28:99:106,0,423	0/0:16,0:16:45.15:0,45,1733	1/1:17,1:18:27.09:432,27,0	0/1:10,0:10:9.77:157,0,10	0/1:12,0:11:43.86:44,0,227	0/0:10,0:9:20.97:0,21,381	0/1:5,0:4:13.78:14,0,151	0/0:20,0:20:50.78:0,51,458	0/1:13,0:13:5.05:5,0,27	0/1:22,0:22:20.71:21,0,83	1/1:16,1:18:45.02:641,45,0	1/1:18,0:19:29.14:438,29,0	0/0:21,0:21:54.13:0,54,990	1/1:8,0:8:12.04:183,12,0
chr10	49319984	.	TCTTTTC	T	7629.90	PASS	AB=0.705;AC=28;AF=0.500;AN=56;BaseQRankSum=5.606;DP=532;FS=0.367;HRun=0;HaplotypeScore=153.5663;InbreedingCoeff=0.4348;MQ=61.25;MQ0=1;MQRankSum=-5.368;QD=25.10;ReadPosRankSum=-4.101;VQSLOD=3.4152;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,141,4756	0/1:0,0:5:6.05:6,0,10	0/0:20,0:14:39.58:0,40,913	0/0:33,0:19:53.90:0,54,1448	1/1:0,20:21:47.89:776,48,0	0/0:21,0:21:63.17:0,63,1876	0/0:30,0:30:90.31:0,90,3072	1/1:6,26:32:71.92:1348,72,0	0/0:18,0:18:51.17:0,51,1708	1/1:1,19:21:54.77:934,55,0	1/1:3,21:26:69.21:1022,69,0	0/1:7,0:15:20.82:21,0,84	0/0:8,0:12:2.17:0,2,147	1/1:0,10:12:18.06:331,18,0	0/1:18,0:28:99:197,0,173	0/0:16,0:16:45.15:0,45,1567	1/1:1,16:18:27.09:636,27,0	1/1:3,6:10:2.48:265,2,0	0/1:12,0:11:63.13:63,0,137	0/0:10,0:9:19.08:0,19,276	0/1:5,0:4:13.84:14,0,106	0/1:13,0:20:6.22:6,0,151	0/1:0,0:12:1.93:29,0,2	0/1:1,0:22:15.68:45,0,16	1/1:2,16:18:45.02:952,45,0	1/1:2,17:19:47.10:680,47,0	0/0:20,0:20:52.32:0,52,728	1/1:0,8:8:12.04:305,12,0
chr10	49319986	.	TTTTC	T	2901.88	PASS	AB=0.981;AC=27;AF=0.482;AN=56;BaseQRankSum=9.490;DP=533;FS=0.000;HRun=0;HaplotypeScore=151.9308;InbreedingCoeff=0.4089;MQ=61.09;MQ0=1;MQRankSum=-10.754;QD=9.39;ReadPosRankSum=-1.295;VQSLOD=2.7593;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,138,3623	0/1:5,0:5:5.34:5,0,18	0/0:22,0:15:42.61:0,43,759	0/0:34,0:21:60.13:0,60,1212	1/1:20,1:21:30.47:307,30,0	0/0:20,0:20:51.17:0,51,1359	0/0:30,0:30:90.31:0,90,2356	1/1:32,0:32:29.55:459,30,0	0/0:18,0:18:51.16:0,51,1300	1/1:20,1:21:31.82:353,32,0	1/1:24,2:26:36.05:379,36,0	0/1:15,0:15:20.19:20,0,35	0/1:12,0:12:10.11:10,0,110	1/1:10,2:12:17.98:181,18,0	0/1:27,0:27:99:162,0,128	0/0:16,0:16:45.15:0,45,1200	1/1:18,0:18:27.07:299,27,0	0/1:9,1:10:5.84:121,0,6	0/1:12,0:11:19.18:19,0,140	0/0:10,0:9:20.89:0,21,245	0/0:5,0:4:8.03:0,8,94	0/1:20,0:20:44.28:44,0,75	0/1:10,1:11:2.67:8,0,3	0/1:22,0:22:7.06:25,0,7	1/1:18,0:18:36.10:393,36,0	1/1:19,0:19:6.66:184,7,0	0/0:21,0:21:50.93:0,51,712	1/1:8,0:8:12.03:132,12,0
chr10	49319989	.	TC	T	3879.98	PASS	AB=1.000;AC=40;AF=0.714;AN=56;BaseQRankSum=12.977;DP=533;FS=14.283;HRun=1;HaplotypeScore=124.3349;InbreedingCoeff=0.8020;MQ=61.04;MQ0=1;MQRankSum=-10.708;QD=11.38;ReadPosRankSum=-4.515;VQSLOD=-0.1116;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,141,1998	1/1:4,2:6:14.95:130,15,0	0/0:23,0:15:39.66:0,40,437	0/0:37,0:22:61.11:0,61,729	1/1:21,0:21:30.95:184,31,0	0/0:17,0:17:51.17:0,51,745	0/0:33,0:33:99:0,99,1348	1/1:32,0:32:42.10:276,42,0	0/0:19,0:19:54.16:0,54,749	1/1:21,0:21:37.27:209,37,0	1/1:25,0:25:34.93:203,35,0	1/1:9,7:16:41.80:330,42,0	1/1:9,2:11:32.84:266,33,0	1/1:12,0:12:17.81:127,18,0	1/1:18,8:26:60.66:526,61,0	0/0:16,0:16:45.15:0,45,657	1/1:17,1:18:26.26:155,26,0	0/1:9,0:9:10.88:58,0,11	1/1:11,0:10:19.96:119,20,0	1/1:9,0:8:7.21:50,7,0	1/1:4,0:3:2.92:18,3,0	1/1:15,6:21:59.72:441,60,0	1/1:9,1:10:11.82:88,12,0	1/1:15,6:21:25.08:181,25,0	1/1:18,0:18:34.97:198,35,0	0/1:19,0:19:2.79:98,0,3	1/1:23,0:23:15.82:154,16,0	1/1:8,0:8:11.70:68,12,0
chr10	49320149	.	GGAGA	G	199.93	PASS	AB=0.928;AC=15;AF=0.417;AN=36;BaseQRankSum=3.074;DP=458;FS=3.522;HRun=0;HaplotypeScore=90.2491;InbreedingCoeff=0.2484;MQ=76.80;MQ0=15;MQRankSum=0.615;QD=1.46;ReadPosRankSum=3.016;VQSLOD=1.6056;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:16:12.03:0,12,208	0/0:3,0:2:0.47:0,0,1	./.	0/0:48,0:27:0:0,0,0	1/1:18,0:18:2.98:35,3,0	0/1:13,5:18:17.94:40,0,18	0/0:27,0:28:0.47:0,0,1	0/0:30,0:28:4.48:0,4,11	0/1:14,0:14:17.62:18,0,20	0/0:18,0:18:0:0,0,0	0/0:9,0:9:0:0,0,0	./.	./.	1/1:9,0:9:3:28,3,0	1/1:17,0:17:6.01:67,6,0	0/1:17,0:17:0:0,0,0	0/0:18,0:18:1.82:0,2,5	./.	1/1:11,0:11:3:28,3,0	./.	./.	./.	./.	./.	1/1:17,0:17:3:28,3,0	0/0:8,0:8:0.47:0,0,1	1/1:15,0:16:6.01:56,6,0	./.
chr10	49320723	.	G	GT	7051.10	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=5.886;DP=643;FS=7.121;HRun=0;HaplotypeScore=163.2041;InbreedingCoeff=0.9986;MQ=86.04;MQ0=0;MQRankSum=-4.473;QD=27.65;ReadPosRankSum=1.833;VQSLOD=4.2562;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:75.25:0,75,1043	0/0:15,0:15:34.72:0,35,193	0/0:24,0:22:62.57:0,63,842	0/0:28,0:27:73.16:0,73,872	1/1:8,20:28:54.56:633,55,0	0/0:29,0:29:87.28:0,87,1192	0/0:14,0:14:42.14:0,42,575	1/1:9,24:33:38.26:749,38,0	0/0:18,0:18:54.18:0,54,754	1/1:3,30:33:85.32:986,85,0	1/1:4,16:21:44.60:535,45,0	0/0:19,0:19:43.94:0,44,249	0/0:18,0:18:22.81:0,23,219	1/1:3,29:32:77.24:939,77,0	0/0:30,0:30:80.25:0,80,425	0/0:24,0:24:72.23:0,72,987	1/1:3,17:20:41.33:512,41,0	1/1:2,20:22:60.18:704,60,0	0/0:12,0:12:25.69:0,26,129	0/0:19,0:19:52.20:0,52,286	0/0:8,0:8:21.33:0,21,119	0/0:24,0:24:44.51:0,45,346	0/0:20,0:20:57.18:0,57,321	0/0:22,0:21:60.80:0,61,345	1/1:2,20:22:57.16:654,57,0	1/1:2,30:33:89.94:1020,90,0	0/0:38,0:38:99:0,100,568	1/1:0,11:11:27.08:319,27,0
chr10	49322006	.	T	TG	466.02	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-4.033;DP=772;FS=2.881;HRun=9;HaplotypeScore=128.1558;InbreedingCoeff=0.9953;MQ=85.62;MQ0=0;MQRankSum=-2.927;QD=17.26;ReadPosRankSum=-3.497;VQSLOD=1.9623;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:26:61.04:0,61,505	0/0:11,0:11:32.99:0,33,286	0/0:21,0:21:44.87:0,45,379	0/0:31,0:34:44.72:0,45,422	0/0:25,0:25:62.97:0,63,546	0/0:21,0:21:50.94:0,51,442	0/0:35,0:35:97.23:0,97,818	0/0:28,0:28:56.92:0,57,494	0/0:25,0:25:74.96:0,75,646	0/0:30,0:30:68.36:0,68,582	0/0:26,0:26:71.97:0,72,621	0/0:33,0:33:86.92:0,87,750	0/0:42,0:42:99:0,120,1031	0/0:40,0:40:99:0,108,919	0/0:34,0:34:86.92:0,87,755	1/1:18,9:27:36:561,36,0	0/0:33,0:33:95.93:0,96,825	0/0:27,0:27:71.92:0,72,618	0/0:21,0:21:53.88:0,54,463	0/0:14,0:14:20.98:0,21,182	0/0:43,0:43:99:0,105,911	0/0:20,0:20:50.97:0,51,442	0/0:17,0:17:38.98:0,39,338	0/0:47,0:46:99:0,135,1164	0/0:27,0:27:53.88:0,54,468	0/0:18,0:18:50.99:0,51,442	0/0:33,0:33:92.95:0,93,803	0/0:14,0:14:35.99:0,36,312
chr10	49322408	.	TA	T	8239.19	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=15.957;DP=765;FS=4.772;HRun=4;HaplotypeScore=77.2468;InbreedingCoeff=0.9988;MQ=80.34;MQ0=0;MQRankSum=-2.725;QD=31.81;ReadPosRankSum=0.661;VQSLOD=5.3850;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,126,1747	0/0:17,0:17:48.16:0,48,672	0/0:22,0:22:56.20:0,56,710	0/0:20,0:20:51.16:0,51,665	1/1:1,33:34:87.27:1043,87,0	0/0:18,0:18:51.14:0,51,680	0/0:28,0:28:84.28:0,84,1173	1/1:0,27:27:78.23:924,78,0	0/0:36,0:36:99:0,102,1412	1/1:2,28:30:81.23:959,81,0	1/1:1,19:20:45.14:540,45,0	0/0:29,0:29:81.26:0,81,1119	0/0:36,0:36:99:0,105,1469	1/1:2,30:32:81.25:972,81,0	0/0:39,0:39:99:0,111,1554	0/0:26,0:26:75.25:0,75,1050	1/1:3,24:27:69.21:828,69,0	1/1:3,23:26:63.19:754,63,0	0/0:22,0:22:60.19:0,60,825	0/0:20,0:20:60.19:0,60,824	0/0:45,0:45:99:0,126,1729	0/0:24,0:24:60.20:0,60,840	0/0:20,0:20:51.16:0,51,697	0/0:30,0:30:87.27:0,87,1188	1/1:0,24:24:69.21:828,69,0	1/1:0,33:33:99:1176,99,0	0/0:30,0:30:84.27:0,84,1160	1/1:0,6:6:18.06:216,18,0
chr10	49322705	.	TTCACGGCAGC	T	15814.83	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=16.461;DP=702;FS=3.855;HRun=0;HaplotypeScore=227.2359;InbreedingCoeff=0.9720;MQ=85.95;MQ0=0;MQRankSum=-17.740;QD=71.24;ReadPosRankSum=3.120;VQSLOD=4.4707;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,151,6644	0/0:9,0:9:24.08:0,24,1260	0/0:26,0:26:78.27:0,78,3371	0/0:28,0:28:81.27:0,81,3804	1/1:6,27:33:66.22:1981,66,0	0/0:29,0:29:84.29:0,84,3845	0/0:38,0:38:99:0,111,5621	1/1:8,16:24:48.14:1310,48,0	0/0:22,0:22:63.22:0,63,3262	1/1:5,22:27:66.23:2197,66,0	1/1:3,10:13:27.09:900,27,0	0/0:34,0:34:99:0,99,4903	0/0:28,0:28:78.27:0,78,4015	1/1:4,33:37:96.33:3202,96,0	0/0:39,0:39:99:0,117,6055	0/0:33,0:33:93.32:0,93,4808	1/1:3,12:15:33.11:1037,33,0	1/1:7,22:29:57.20:1901,57,0	0/0:23,0:23:66.20:0,66,2766	0/0:12,0:12:30.10:0,30,1240	0/0:36,0:36:99:0,108,5111	0/0:19,0:19:54.17:0,54,2072	0/0:6,0:6:18.06:0,18,650	0/0:23,0:23:69.24:0,69,3666	1/1:2,13:15:30.10:1000,30,0	1/1:6,22:28:66.23:2186,66,0	0/0:22,0:22:63.22:0,63,3187	1/1:0,1:1:3.01:100,3,0
chr10	49324145	.	AT	A	6467.10	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=14.427;DP=685;FS=0.961;HRun=8;HaplotypeScore=65.1843;InbreedingCoeff=0.9982;MQ=80.56;MQ0=0;MQRankSum=-2.195;QD=24.31;ReadPosRankSum=1.278;VQSLOD=5.6634;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,99,1173	0/0:8,0:8:24.07:0,24,290	0/0:21,0:21:50.34:0,50,626	0/0:16,0:16:17.67:0,18,345	1/1:1,32:33:90.03:846,90,0	0/0:26,0:26:72.15:0,72,851	0/0:11,0:11:27.07:0,27,314	1/1:5,32:37:93.10:898,93,0	0/0:18,0:18:51.16:0,51,616	1/1:5,24:29:69.08:659,69,0	1/1:1,17:18:51:479,51,0	0/0:25,0:25:72.21:0,72,858	0/0:21,0:21:54.15:0,54,641	1/1:1,25:26:72.11:695,72,0	0/0:36,0:36:99:0,105,1258	0/0:24,0:24:72.22:0,72,870	1/1:6,26:32:78.12:753,78,0	1/1:3,16:19:39.06:377,39,0	0/0:19,0:19:54.16:0,54,642	0/0:33,0:33:90.28:0,90,1087	0/0:19,0:19:54.14:0,54,638	0/0:21,0:21:60.18:0,60,725	0/0:25,0:25:69.20:0,69,824	0/0:25,0:25:72.22:0,72,870	1/1:2,23:25:60.09:579,60,0	1/1:2,28:30:84.11:805,84,0	0/0:34,0:33:93.26:0,93,1100	1/1:4,13:17:39.06:377,39,0
chr10	49324355	.	GTT	G	5381.98	PASS	AB=0.833;AC=21;AF=0.375;AN=56;BaseQRankSum=2.570;DP=690;FS=3.296;HRun=13;HaplotypeScore=97.9397;InbreedingCoeff=0.9410;MQ=70.57;MQ0=3;MQRankSum=-1.376;QD=20.70;ReadPosRankSum=3.739;VQSLOD=4.6432;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:47,1:54:99:0,113,1767	0/1:8,0:10:2.54:3,0,276	0/0:31,0:18:33.38:0,33,265	0/0:12,0:10:9.02:0,9,143	1/1:4,29:34:78:805,78,0	0/0:21,0:24:65.19:0,65,871	0/0:22,0:24:61.81:0,62,746	1/1:13,25:41:64.47:762,64,0	0/0:18,0:18:48.14:0,48,652	1/1:5,17:22:51.01:488,51,0	1/1:1,14:15:36.04:349,36,0	0/0:23,0:23:60.19:0,60,840	0/0:19,1:21:51.17:0,51,721	1/1:2,19:21:57.06:553,57,0	0/0:21,0:22:50.10:0,50,602	0/0:9,0:29:48.08:0,48,469	1/1:9,29:39:62.89:710,63,0	1/1:3,21:26:59.56:547,60,0	0/0:17,0:36:71.63:0,72,748	0/0:2,0:18:42.08:0,42,424	0/0:12,0:17:36.09:0,36,411	0/0:30,0:31:39.65:0,40,886	0/0:20,0:22:56.16:0,56,756	0/0:22,0:22:63.20:0,63,893	1/1:1,18:19:45.07:437,45,0	1/1:5,20:25:57.05:553,57,0	0/0:3,0:23:46.59:0,47,450	1/1:1,6:7:18.01:175,18,0
chr10	49325017	.	AAAAAAAAAAAAAAAAAAAAAAAGAAAAG	A	7238.34	PASS	AB=0.714;AC=17;AF=0.304;AN=56;BaseQRankSum=5.488;DP=286;FS=48.929;HRun=0;HaplotypeScore=176.8007;InbreedingCoeff=0.6752;MQ=37.18;MQ0=33;MQRankSum=-1.580;QD=64.63;ReadPosRankSum=6.080;VQSLOD=2.0204;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:12:15.05:0,15,1376	0/0:3,0:3:6.02:0,6,463	0/0:9,0:1:3.01:0,3,90	0/0:10,0:1:3.01:0,3,87	1/1:7,9:15:18.98:1081,19,0	0/0:14,0:12:30.10:0,30,2912	0/0:14,0:12:33.10:0,33,2540	0/0:17,0:15:0:0,0,1	0/0:7,0:6:15.05:0,15,1590	1/1:4,5:8:14.83:599,15,0	1/1:4,8:11:10.44:1017,10,0	0/0:7,0:7:15.05:0,15,856	0/0:3,0:3:6.02:0,6,544	1/1:5,2:7:5.64:409,6,0	0/0:6,0:5:15.05:0,15,1147	0/0:8,0:8:21.06:0,21,1193	1/1:9,6:12:6.62:411,7,0	0/1:12,8:17:99:1202,0,408	0/0:14,0:13:36.10:0,36,2540	0/0:15,0:15:36.12:0,36,2844	0/0:3,0:3:3.01:0,3,269	0/0:3,0:2:3.01:0,3,83	0/0:7,0:6:18.06:0,18,1298	0/0:8,0:6:6.02:0,6,340	1/1:6,8:13:14.76:1024,15,0	1/1:1,5:5:15.04:676,15,0	0/0:11,0:9:15.04:0,15,786	1/1:9,4:9:11.66:819,12,0
chr10	49325045	.	G	GA	2162.87	PASS	AB=0.981;AC=29;AF=0.518;AN=56;BaseQRankSum=-2.805;DP=350;FS=18.348;HRun=6;HaplotypeScore=109.9397;InbreedingCoeff=0.4661;MQ=51.86;MQ0=26;MQRankSum=0.172;QD=9.97;ReadPosRankSum=-5.362;VQSLOD=-0.5163;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:13:14.95:0,15,153	1/1:2,2:4:7.35:85,7,0	0/1:31,0:4:14:14,0,48	0/1:33,0:9:32.26:32,0,36	0/1:10,0:10:6.70:7,0,19	0/0:15,0:13:23.21:0,23,182	0/0:15,0:15:34.68:0,35,266	1/1:6,0:5:11.86:86,12,0	0/0:10,0:10:29.73:0,30,270	1/1:12,0:12:15.07:189,15,0	0/0:11,0:10:9.70:0,10,30	1/1:0,12:12:33.11:415,33,0	1/1:2,8:10:26.83:298,27,0	0/1:4,0:4:2.77:45,0,3	1/1:5,11:16:19.71:290,20,0	1/1:2,5:7:17.33:209,17,0	0/1:21,0:19:10.19:73,0,10	0/1:11,2:12:24.68:53,0,25	0/0:24,0:21:48.90:0,49,467	0/0:17,0:17:38.75:0,39,373	0/0:3,0:2:6.01:0,6,61	1/1:1,4:4:6.02:71,6,0	1/1:7,3:9:20.60:198,21,0	1/1:2,2:3:6.02:75,6,0	0/0:10,0:9:10.18:0,10,32	1/1:13,0:12:10.80:207,11,0	0/0:12,0:11:26.26:0,26,245	0/1:6,0:5:14.54:15,0,15
chr10	49325404	.	CTTTT	C	7275.02	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=-1.233;DP=601;FS=8.069;HRun=14;HaplotypeScore=130.7532;InbreedingCoeff=0.9452;MQ=70.38;MQ0=0;MQRankSum=-0.844;QD=28.76;ReadPosRankSum=2.733;VQSLOD=3.0863;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:30:75.16:0,75,1525	0/0:3,0:13:32.31:0,32,202	0/0:17,0:14:26.21:0,26,344	0/1:12,0:12:3.14:3,0,167	1/1:7,30:38:87.51:1182,88,0	0/0:18,0:18:54.17:0,54,1116	0/0:16,0:21:51.17:0,51,1022	1/1:8,24:32:70.62:870,71,0	0/0:13,0:15:38.98:0,39,759	1/1:9,24:33:69.04:965,69,0	1/1:3,21:25:60.07:826,60,0	0/0:2,0:19:39.25:0,39,245	0/0:5,0:19:44.13:0,44,291	1/1:3,19:22:54.11:763,54,0	0/0:4,0:18:39.27:0,39,265	0/0:2,0:26:68.40:0,68,406	1/1:2,24:26:48.10:679,48,0	1/1:2,6:9:18:236,18,0	0/0:23,0:25:48.14:0,48,935	0/0:26,0:27:72.16:0,72,1251	0/0:15,0:16:30.09:0,30,621	0/0:1,0:17:34.42:0,34,217	0/0:8,0:28:49.90:0,50,308	0/0:2,0:9:20.64:0,21,159	1/1:3,11:14:33.04:467,33,0	1/1:3,26:29:23.66:987,24,0	0/0:27,0:29:66.05:0,66,1203	1/1:0,13:13:21.07:296,21,0
chr10	49325573	.	GTT	G	3443.16	PASS	AB=0.691;AC=35;AF=0.625;AN=56;BaseQRankSum=3.038;DP=534;FS=4.343;HRun=15;HaplotypeScore=84.9752;InbreedingCoeff=0.4950;MQ=72.47;MQ0=1;MQRankSum=-0.711;QD=8.42;ReadPosRankSum=4.970;VQSLOD=1.4699;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:17:39:0,39,426	1/1:2,0:7:16.71:85,17,0	0/0:19,0:14:26.81:0,27,245	0/1:15,0:12:0.42:0,0,89	1/1:5,15:25:10.37:311,10,0	0/0:12,0:12:26.53:0,27,276	0/0:20,0:21:48.09:0,48,573	1/1:17,20:41:34.06:403,34,0	0/0:8,0:24:51.85:0,52,228	1/1:15,16:32:53.15:442,53,0	0/1:5,7:15:15.60:142,0,16	1/1:2,0:15:32.89:141,33,0	1/1:6,1:21:39.28:179,39,0	1/1:6,10:17:26.65:222,27,0	1/1:9,0:20:24.55:105,25,0	1/1:6,1:27:50.77:247,51,0	1/1:2,8:12:26.46:208,26,0	1/1:3,7:12:1.71:148,2,0	0/1:11,2:23:11.06:11,0,153	0/0:12,0:19:27.44:0,27,180	0/0:7,0:11:16.97:0,17,133	0/1:5,0:14:5.47:69,0,5	1/1:4,1:15:7.03:91,7,0	0/1:7,0:13:7.37:37,0,7	1/1:8,4:12:14.46:117,14,0	0/1:10,13:24:11.25:252,0,11	0/1:15,3:31:24.96:25,0,235	1/1:6,9:16:25.81:206,26,0
chr10	49325586	.	TTTC	T	576.09	PASS	AB=0.967;AC=11;AF=0.196;AN=56;BaseQRankSum=5.321;DP=488;FS=8.178;HRun=0;HaplotypeScore=100.0968;InbreedingCoeff=-0.0491;MQ=74.93;MQ0=1;MQRankSum=-0.895;QD=3.82;ReadPosRankSum=5.498;VQSLOD=0.8218;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:20:51.09:0,51,711	1/1:6,0:6:5.14:43,5,0	0/0:21,0:16:2.72:0,3,392	0/0:18,0:12:28.82:0,29,246	0/0:26,0:26:62.18:0,62,410	0/0:13,0:12:29.96:0,30,409	0/0:22,0:22:62.87:0,63,852	0/0:33,0:33:44.03:0,44,469	0/0:23,0:23:53.18:0,53,452	0/0:25,0:25:34.09:0,34,266	0/0:12,0:12:18.73:0,19,120	0/1:15,0:15:24.61:91,0,25	0/1:17,2:19:13.15:192,0,13	0/1:15,0:15:1.50:1,0,76	0/1:15,1:16:36.16:78,0,36	0/1:25,2:27:27.74:186,0,28	0/0:13,0:13:14.41:0,14,132	0/0:11,0:11:15.83:0,16,99	0/0:22,0:22:48.37:0,48,409	0/0:13,0:13:27.04:0,27,301	0/0:10,0:10:14.57:0,15,268	0/1:11,0:11:25.33:62,0,25	0/1:15,0:15:36.04:43,0,36	0/1:11,1:12:15.76:16,0,71	0/0:8,0:8:3.82:0,4,55	0/0:17,0:17:44.57:0,45,316	0/0:29,0:28:64.17:0,64,653	0/1:15,0:15:2.26:2,0,75
chr10	49326835	.	CTTTATT	C	7823.52	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=18.509;DP=693;FS=6.222;HRun=0;HaplotypeScore=200.5681;InbreedingCoeff=0.9835;MQ=91.26;MQ0=0;MQRankSum=-18.049;QD=43.95;ReadPosRankSum=1.969;VQSLOD=4.2476;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,123,4563	0/0:15,0:15:45.15:0,45,1694	0/0:44,0:44:99:0,129,4409	0/0:20,0:20:60.18:0,60,1751	1/1:2,27:29:67.26:1124,67,0	0/0:19,0:19:57.20:0,57,2120	0/0:32,0:32:96.33:0,96,3597	1/1:4,11:15:19.45:594,19,0	0/0:18,0:18:54.19:0,54,1990	1/1:1,15:16:48.16:853,48,0	1/1:3,13:16:46.99:697,47,0	0/0:30,0:30:90.31:0,90,3274	0/0:24,0:24:72.25:0,72,2687	1/1:1,23:24:64.69:1082,65,0	0/0:29,0:29:87.30:0,87,3272	0/0:27,0:27:81.27:0,81,2943	1/1:3,14:17:40.01:638,40,0	1/1:1,13:14:40:636,40,0	0/0:28,0:28:84.29:0,84,3101	0/0:32,0:32:96.33:0,96,3491	0/0:44,0:44:99:0,132,4824	0/0:29,0:29:87.28:0,87,3166	0/0:15,0:15:45.15:0,45,1608	0/0:36,0:36:99:0,108,3980	1/1:1,22:23:67.05:1083,67,0	1/1:3,19:22:55.39:1011,55,0	0/0:31,0:31:93.32:0,93,3498	1/1:0,2:2:6.02:106,6,0
chr10	49326842	.	GCAGAA	G	6184.38	PASS	AB=0.582;AC=12;AF=0.214;AN=56;BaseQRankSum=18.741;DP=706;FS=2.364;HRun=0;HaplotypeScore=195.0846;InbreedingCoeff=0.2546;MQ=86.56;MQ0=0;MQRankSum=-17.738;QD=31.08;ReadPosRankSum=3.357;VQSLOD=4.9716;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,129,4256	0/0:16,0:16:48.16:0,48,1599	0/0:41,0:41:99:0,123,3876	0/0:16,0:16:48.16:0,48,1472	0/1:4,27:31:36.42:889,0,36	0/0:18,0:18:54.19:0,54,1782	0/0:28,0:28:84.29:0,84,2790	0/1:8,11:19:99:461,0,260	0/0:18,0:18:54.19:0,54,1799	0/1:3,15:18:8.82:691,0,9	0/1:2,12:16:4.81:523,0,5	0/0:30,0:30:90.31:0,90,2936	0/0:24,0:24:72.25:0,72,2383	0/1:6,22:29:2.95:867,0,3	0/0:31,0:31:93.32:0,93,3039	0/0:27,0:27:81.28:0,81,2691	0/1:7,14:21:30.07:488,0,30	0/1:2,13:15:14.26:487,0,14	0/0:28,0:28:84.29:0,84,2746	0/0:30,0:30:87.23:0,87,2860	0/0:44,0:44:99:0,132,4398	0/0:29,0:29:87.30:0,87,2898	0/0:16,0:16:45.15:0,45,1491	0/0:36,0:36:99:0,108,3502	1/1:2,22:24:12.03:859,12,0	1/1:2,19:21:20.59:841,21,0	0/0:31,0:31:93.32:0,93,3099	0/1:3,2:5:17.95:80,0,18
chr10	49328408	.	TCTGCACC	T	5485.48	PASS	AB=0.600;AC=19;AF=0.339;AN=56;BaseQRankSum=12.109;DP=702;FS=12.841;HRun=0;HaplotypeScore=169.5685;InbreedingCoeff=0.9043;MQ=68.99;MQ0=3;MQRankSum=-7.261;QD=25.05;ReadPosRankSum=-0.583;VQSLOD=3.9184;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:69.19:0,69,2225	0/0:8,0:8:21.06:0,21,644	0/0:33,0:20:13.28:0,13,159	0/0:45,0:37:13.01:0,13,231	1/1:4,15:19:5.50:56,6,0	0/0:22,0:21:58.44:0,58,1769	0/0:34,0:34:78.20:0,78,2299	1/1:17,13:30:39:445,39,0	0/0:21,0:21:60.19:0,60,1965	1/1:11,17:28:45.08:885,45,0	1/1:5,7:12:5.77:140,6,0	0/0:42,0:42:99:0,102,3235	0/0:26,0:26:66.16:0,66,1895	1/1:10,24:34:45.02:947,45,0	0/0:20,0:20:48.14:0,48,1581	0/0:22,0:22:51.15:0,51,1575	0/1:8,16:24:1.37:214,0,1	1/1:4,10:14:12.04:280,12,0	0/0:20,0:18:39.12:0,39,1149	0/0:13,0:13:24.05:0,24,723	0/0:46,0:46:99:0,117,3753	0/0:18,0:18:45.11:0,45,1299	0/0:13,0:13:33.11:0,33,1128	0/0:37,0:37:81.24:0,81,2497	1/1:4,20:24:51.11:1099,51,0	1/1:4,19:23:60.05:1068,60,0	0/0:23,0:23:60.09:0,60,1664	1/1:5,6:11:15.05:350,15,0
chr10	49329320	.	T	TAC	2607.50	PASS	AB=0.803;AC=23;AF=0.460;AN=50;BaseQRankSum=-6.740;DP=681;FS=1.974;HRun=0;HaplotypeScore=116.8539;InbreedingCoeff=-0.1630;MQ=63.70;MQ0=23;MQRankSum=1.568;QD=5.58;ReadPosRankSum=-1.323;VQSLOD=3.1586;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:31:17.24:17,0,172	1/1:7,5:12:6.02:88,6,0	./.	./.	0/1:13,0:22:14.20:20,0,14	0/0:12,0:19:11.36:0,11,56	0/0:18,0:27:19.46:0,19,97	1/1:16,0:15:3.90:39,4,0	0/0:14,0:15:6.21:0,6,30	1/1:23,0:23:9.01:91,9,0	1/1:17,0:17:6:61,6,0	0/1:17,7:28:55.55:56,0,58	0/1:23,1:24:78.74:106,0,79	0/1:19,6:27:32.45:159,0,32	0/1:16,9:27:67.87:197,0,68	0/0:11,0:27:36.93:0,37,181	0/1:34,7:41:99:456,0,116	0/1:21,7:28:99:200,0,115	0/0:10,0:14:8.33:0,8,37	./.	0/0:31,0:31:0:0,0,0	1/1:20,5:27:12.03:159,12,0	0/1:23,2:25:95.26:171,0,95	0/1:34,25:58:79.01:642,0,79	0/1:14,3:30:43.24:145,0,43	0/1:14,1:15:13.53:38,0,14	0/0:10,0:16:22.73:0,23,112	0/1:6,4:9:18.65:120,0,19
chr10	49332119	.	TCACACACACACACACACA	T	778.27	PASS	AB=0.957;AC=14;AF=0.269;AN=52;BaseQRankSum=2.232;DP=442;FS=8.909;HRun=0;HaplotypeScore=179.1397;InbreedingCoeff=0.3386;MQ=64.39;MQ0=16;MQRankSum=-1.323;QD=5.48;ReadPosRankSum=-0.778;VQSLOD=2.1210;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:21:15.05:0,15,965	0/0:4,0:4:6.02:0,6,348	./.	./.	1/1:19,0:19:3.01:33,3,0	0/0:10,0:11:6.02:0,6,232	0/0:20,0:21:9.01:0,9,114	0/0:28,0:27:3.58:0,4,11	0/0:7,0:7:3.01:0,3,124	1/1:14,0:13:3:32,3,0	0/1:8,0:8:0:0,0,0	0/0:11,0:11:18.06:0,18,728	0/0:7,0:9:6.02:0,6,273	1/1:14,3:17:6.02:288,6,0	0/0:8,0:10:9.03:0,9,364	0/0:12,0:13:6:0,6,138	1/1:21,5:25:6.02:288,6,0	0/1:12,1:13:68.18:138,0,68	0/0:12,0:12:3.90:0,4,124	0/0:14,0:15:3.01:0,3,122	0/0:23,0:23:5.99:0,6,143	0/0:13,0:12:3.01:0,3,202	0/0:10,0:9:6.02:0,6,315	0/0:19,0:19:18.06:0,18,880	1/1:17,0:16:3.01:44,3,0	0/1:17,0:17:0.52:63,0,1	0/0:12,0:12:9.03:0,9,322	0/1:10,0:9:16.94:31,0,17
chr10	49333569	.	T	TC	7552.66	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-13.655;DP=821;FS=4.527;HRun=5;HaplotypeScore=77.8058;InbreedingCoeff=0.9992;MQ=82.10;MQ0=0;MQRankSum=-5.966;QD=31.87;ReadPosRankSum=4.265;VQSLOD=5.4971;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:57:99:0,153,1635	1/1:1,19:20:54.18:710,54,0	0/0:25,0:25:54.07:0,54,555	0/0:20,0:20:51.05:0,51,501	0/0:28,0:28:78.19:0,78,838	0/0:25,0:25:72.17:0,72,768	0/0:28,0:28:63.13:0,63,666	0/0:37,0:37:93.23:0,93,1000	0/0:31,0:31:90.23:0,90,967	0/0:35,0:35:96.23:0,96,1021	0/0:16,0:16:48.12:0,48,509	1/1:3,34:37:96.31:1263,96,0	1/1:4,37:41:93.20:1218,93,0	0/0:26,0:26:75.17:0,75,798	1/1:3,43:45:99:1579,120,0	0/0:32,0:32:81.17:0,81,854	0/0:31,0:31:84.19:0,84,891	0/0:21,0:21:60.13:0,60,635	0/0:17,0:17:42.10:0,42,451	0/0:23,0:23:57.12:0,57,603	0/0:47,0:47:99:0,135,1443	1/1:1,24:25:63.03:782,63,0	1/1:2,27:29:65.95:868,66,0	1/1:3,35:39:87.28:1134,87,0	0/0:30,0:30:75.17:0,75,799	0/0:25,0:25:63.15:0,63,677	0/0:23,0:23:66.14:0,66,700	0/0:7,0:7:20.99:0,21,203
chr10	49336415	.	TGCAC	T	636.84	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.338;DP=570;FS=0.000;HRun=0;HaplotypeScore=94.8151;InbreedingCoeff=0.9678;MQ=84.43;MQ0=0;MQRankSum=-1.922;QD=45.49;ReadPosRankSum=1.191;VQSLOD=4.0912;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,132,3686	0/0:4,0:4:12.04:0,12,348	0/0:17,0:17:45.15:0,45,1255	0/0:21,0:21:53.22:0,53,1408	0/0:13,0:13:36.11:0,36,979	0/0:12,0:11:36.11:0,36,937	0/0:19,0:19:57.20:0,57,1651	0/0:21,0:21:60.20:0,60,1679	0/0:24,0:24:63.20:0,63,1759	0/0:23,0:23:69.24:0,69,1999	0/0:13,0:13:36.12:0,36,1038	0/0:31,0:31:93.32:0,93,2663	0/0:23,0:23:63.22:0,63,1790	0/0:18,0:18:54.19:0,54,1526	0/0:23,0:23:63.22:0,63,1772	1/1:0,14:14:36.12:732,36,0	0/0:24,0:24:72.25:0,72,2084	0/0:29,0:29:84.25:0,84,2339	0/0:18,0:18:51.17:0,51,1440	0/0:15,0:15:42.13:0,42,1128	0/0:28,0:28:84.27:0,84,2331	0/0:16,0:16:48.16:0,48,1390	0/0:14,0:14:39.12:0,39,1009	0/0:36,0:36:99:0,108,2976	0/0:14,0:14:39.12:0,39,1056	0/0:23,0:23:66.21:0,66,1836	0/0:25,0:25:72.22:0,72,1903	0/0:8,0:8:24.08:0,24,679
chr10	49336638	.	AG	A	873.75	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=5.039;DP=406;FS=3.481;HRun=1;HaplotypeScore=83.3292;InbreedingCoeff=0.9332;MQ=59.81;MQ0=4;MQRankSum=-0.028;QD=9.40;ReadPosRankSum=0.162;VQSLOD=1.1678;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:25:75.02:0,75,792	1/1:6,2:8:22.23:104,22,0	0/0:17,0:8:16.19:0,16,150	0/1:9,0:4:3.10:3,0,8	0/0:13,0:13:32.33:0,32,352	0/0:14,0:14:39.11:0,39,453	0/0:4,0:4:12.02:0,12,132	0/0:31,0:31:81.53:0,82,909	0/0:14,0:14:39.08:0,39,431	0/0:15,0:14:42.10:0,42,468	0/0:13,0:13:33.75:0,34,379	1/1:9,2:11:30.36:142,30,0	1/1:16,1:16:45.57:237,46,0	0/0:12,0:12:32.76:0,33,313	1/1:15,1:16:43.03:206,43,0	0/0:12,0:12:36.10:0,36,419	0/0:18,0:18:18.24:0,18,408	0/0:31,0:30:81.13:0,81,899	0/0:17,0:16:45.08:0,45,474	0/0:17,0:17:50.95:0,51,532	0/0:11,0:11:30:0,30,323	1/1:10,1:11:26.82:119,27,0	1/1:11,1:12:29.67:138,30,0	1/1:9,0:9:23:123,23,0	0/0:15,0:15:45.10:0,45,515	0/0:10,0:10:29.54:0,30,318	0/0:11,0:11:33.08:0,33,378	0/0:12,0:12:22.84:0,23,285
chr10	49336648	.	G	GAA	6157.91	PASS	AB=1.000;AC=24;AF=0.429;AN=56;BaseQRankSum=0.361;DP=423;FS=4.640;HRun=8;HaplotypeScore=80.1125;InbreedingCoeff=0.8983;MQ=61.42;MQ0=4;MQRankSum=-0.833;QD=28.12;ReadPosRankSum=-0.813;VQSLOD=4.6984;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:26:72.18:0,72,802	0/0:9,0:9:27.07:0,27,291	0/1:18,0:9:4.64:5,0,129	0/1:7,0:3:2.05:2,0,28	1/1:1,12:13:29.98:375,30,0	0/0:12,0:12:27.05:0,27,292	0/0:8,0:8:24.06:0,24,266	1/1:6,23:30:49.43:976,49,0	0/0:16,0:16:45.12:0,45,500	1/1:5,12:16:33.11:520,33,0	1/1:2,10:12:27.09:419,27,0	0/0:13,0:13:33.08:0,33,354	0/0:16,0:15:39.08:0,39,411	1/1:2,12:14:36.09:534,36,0	0/0:17,0:17:48.06:0,48,498	1/1:1,0:14:27.45:94,27,0	1/1:1,15:18:36.12:552,36,0	1/1:5,25:31:65.71:1005,66,0	0/0:18,0:17:42.10:0,42,461	0/0:15,0:15:36.09:0,36,401	0/0:11,0:11:30.07:0,30,334	0/0:11,0:11:33.08:0,33,356	0/0:10,0:10:24.05:0,24,258	0/0:10,0:10:27.07:0,27,294	1/1:2,15:17:48.12:723,48,0	1/1:3,11:14:36.10:525,36,0	0/0:11,0:11:30.08:0,30,334	1/1:1,11:13:27.09:428,27,0
chr10	49339119	.	CCAAAACACTCCTCCGT	C	13833.36	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=15.309;DP=711;FS=1.775;HRun=0;HaplotypeScore=303.3562;InbreedingCoeff=0.9994;MQ=83.63;MQ0=0;MQRankSum=-15.504;QD=84.87;ReadPosRankSum=4.250;VQSLOD=4.2860;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,132,9687	1/1:1,15:16:36.12:1677,36,0	0/0:35,0:35:90.31:0,90,5979	0/0:33,0:33:88.51:0,89,5841	0/0:17,0:17:48.13:0,48,2994	0/0:12,0:12:33.11:0,33,2594	0/0:26,0:26:75.23:0,75,5152	0/0:32,0:32:87.28:0,87,5817	0/0:23,0:23:63.22:0,63,4731	0/0:21,0:21:57.19:0,57,4011	0/0:22,0:22:60.19:0,60,4298	1/1:3,26:29:57.19:2623,57,0	1/1:0,18:18:35.86:1664,36,0	0/0:23,0:23:69.24:0,69,5087	1/1:1,34:35:72.25:3332,72,0	0/0:33,0:33:93.28:0,93,6426	0/0:40,0:40:99:0,114,8383	0/0:30,0:30:87.30:0,87,6303	0/0:14,0:14:33.10:0,33,1983	0/0:22,0:22:63.21:0,63,4283	0/0:35,0:35:96.31:0,96,6726	1/1:2,27:29:42.14:1920,42,0	1/1:3,11:14:32.04:1479,32,0	1/1:1,21:22:27.05:1138,27,0	0/0:24,0:24:72.24:0,72,4766	0/0:23,0:23:66.23:0,66,4790	0/0:27,0:27:81.28:0,81,5496	0/0:11,0:11:27.07:0,27,1506
chr10	49341418	.	G	GCT	8186.98	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-14.837;DP=804;FS=5.680;HRun=0;HaplotypeScore=97.4644;InbreedingCoeff=0.9993;MQ=87.82;MQ0=2;MQRankSum=-2.247;QD=46.78;ReadPosRankSum=3.283;VQSLOD=6.3216;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,102,1501	1/1:1,7:9:21.07:393,21,0	0/0:29,0:29:56.41:0,56,1021	0/0:32,0:33:54.46:0,54,697	0/0:28,0:28:81.26:0,81,1165	0/0:24,0:24:69.19:0,69,974	0/0:33,0:33:93.30:0,93,1350	0/0:33,0:33:96.31:0,96,1380	0/0:29,0:29:81.27:0,81,1193	0/0:44,0:44:99:0,126,1841	0/0:23,0:23:63.21:0,63,925	1/1:2,28:31:75.26:1405,75,0	1/1:3,24:28:75.17:1332,75,0	0/0:24,0:24:69.22:0,69,996	1/1:0,29:29:75.26:1405,75,0	0/0:33,0:33:99:0,99,1457	0/0:35,0:35:99:0,99,1455	0/0:25,0:25:63.18:0,63,904	0/0:19,0:19:57.18:0,57,822	0/0:34,0:34:99:0,102,1500	0/0:34,0:34:99:0,99,1438	1/1:1,23:23:63.22:1180,63,0	1/1:2,27:29:75.26:1404,75,0	1/1:1,23:24:57.19:1067,57,0	0/0:32,0:32:96.32:0,96,1414	0/0:35,0:35:99:0,102,1485	0/0:33,0:32:99:0,99,1438	0/0:14,0:14:42.14:0,42,619
chr10	49342310	.	T	TCA	14030.03	PASS	AB=0.596;AC=19;AF=0.339;AN=56;BaseQRankSum=-21.106;DP=1218;FS=0.532;HRun=0;HaplotypeScore=176.7916;InbreedingCoeff=0.9224;MQ=59.75;MQ0=18;MQRankSum=2.408;QD=35.34;ReadPosRankSum=-1.466;VQSLOD=5.2576;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,102,1259	0/0:0,0:12:33.84:0,34,163	0/0:83,0:28:60.02:0,60,747	0/0:80,0:34:64.71:0,65,714	1/1:7,29:37:78.27:1297,78,0	0/0:43,0:44:99:0,116,1459	0/0:36,0:37:87.28:0,87,1097	1/1:12,39:56:99:1836,120,0	0/0:43,0:43:99:0,114,1439	1/1:3,33:38:99:1640,99,0	1/1:5,27:32:72.25:1193,72,0	0/0:5,0:43:96.54:0,97,475	0/0:4,0:57:99:0,135,657	1/1:8,34:42:26.67:1500,27,0	0/0:2,0:69:99:0,159,778	0/0:50,0:50:99:0,129,1621	1/1:5,36:41:90.31:1496,90,0	0/1:11,23:34:15.39:883,0,15	0/0:18,0:18:42.13:0,42,530	0/0:38,0:38:99:0,108,1363	0/0:64,0:64:99:0,147,1840	0/0:1,0:30:76.35:0,76,373	0/0:1,0:29:65.29:0,65,321	0/0:6,0:47:99:0,105,517	1/1:9,33:41:75.26:1247,75,0	1/1:8,46:55:99:2289,141,0	0/0:33,0:32:87.27:0,87,1084	1/1:4,16:20:39.13:648,39,0
chr10	49343568	.	TA	T	3138.42	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=13.975;DP=576;FS=1.768;HRun=7;HaplotypeScore=61.7029;InbreedingCoeff=0.9635;MQ=75.76;MQ0=1;MQRankSum=-3.178;QD=24.52;ReadPosRankSum=1.535;VQSLOD=4.2560;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:69.19:0,69,841	1/1:1,8:9:21.05:214,21,0	0/0:12,1:13:2.54:0,3,320	0/0:11,0:11:32.75:0,33,361	0/0:28,0:28:84.27:0,84,1057	0/0:22,0:22:63.20:0,63,792	0/0:14,0:14:42.13:0,42,528	0/0:33,0:33:90.28:0,90,1121	0/0:21,0:21:60.18:0,60,744	0/0:24,0:24:57.18:0,57,717	0/0:32,0:32:93.29:0,93,1159	1/1:0,17:17:45.10:459,45,0	1/1:1,22:23:60.14:612,60,0	0/0:20,0:20:60.19:0,60,754	1/1:1,24:25:69.15:704,69,0	0/0:23,0:23:66.21:0,66,830	0/0:19,0:18:51.16:0,51,641	0/0:25,0:25:63.16:0,63,767	0/0:21,0:21:54.17:0,54,679	0/0:29,0:29:81.26:0,81,1019	0/0:9,0:9:21.07:0,21,264	1/1:0,15:15:39.09:398,39,0	1/1:2,22:24:60.04:612,60,0	1/1:3,12:15:33.07:337,33,0	0/0:21,0:21:57.17:0,57,704	0/0:34,0:34:81.26:0,81,1019	0/0:17,0:17:48.15:0,48,604	0/0:7,0:7:18.06:0,18,226
chr10	49345064	.	T	TG	345.65	PASS	AB=0.887;AC=6;AF=0.107;AN=56;BaseQRankSum=10.408;DP=917;FS=10.211;HRun=0;HaplotypeScore=171.2749;InbreedingCoeff=-0.1121;MQ=76.29;MQ0=4;MQRankSum=-3.594;QD=1.24;ReadPosRankSum=-6.325;VQSLOD=-0.6213;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:92.34:0,92,1261	0/1:7,8:15:99:168,0,213	0/1:63,0:44:99:147,0,780	0/1:87,3:63:59.32:59,0,880	0/0:30,0:30:89.33:0,89,1214	0/0:22,0:22:63.15:0,63,839	0/0:26,0:25:73.30:0,73,977	0/0:45,0:45:99:0,113,1630	0/0:27,0:27:78.22:0,78,1051	0/0:43,0:43:99:0,117,1519	0/0:20,0:20:60.20:0,60,833	0/1:35,0:34:36.54:37,0,1027	0/0:29,0:29:28.48:0,28,837	0/0:34,0:34:92.52:0,93,1263	0/0:38,2:40:56.07:0,56,1501	0/0:28,0:28:60.01:0,60,820	0/0:38,0:38:99:0,108,1522	0/0:26,0:26:78.23:0,78,1071	0/0:21,1:22:28.18:0,28,760	0/0:44,0:44:37.97:0,38,1456	0/0:31,0:31:90.21:0,90,1211	0/0:20,0:19:41.38:0,41,436	0/0:22,0:22:19.08:0,19,760	0/1:26,7:33:50.98:51,0,908	0/0:24,0:24:72.24:0,72,1007	0/0:25,0:25:72.23:0,72,989	0/1:33,2:35:2.29:2,0,1046	0/0:9,0:9:27.09:0,27,378
chr10	49345076	.	GTTGTA	G	737.51	PASS	AB=0.958;AC=11;AF=0.196;AN=56;BaseQRankSum=-3.349;DP=926;FS=0.000;HRun=0;HaplotypeScore=242.0555;InbreedingCoeff=-0.0300;MQ=76.20;MQ0=12;MQRankSum=4.317;QD=2.39;ReadPosRankSum=3.670;VQSLOD=2.2420;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:43.89:0,44,1324	0/0:16,0:16:41.92:0,42,542	0/0:65,0:42:9.08:0,9,243	0/0:106,0:65:16.12:0,16,325	0/1:29,0:29:71.96:72,0,580	0/0:22,0:22:45:0,45,1042	0/0:29,0:28:56.99:0,57,921	1/1:37,6:35:24.41:199,24,0	0/0:29,0:29:65.88:0,66,1251	0/1:49,0:48:81.81:82,0,981	0/1:23,0:23:28.86:29,0,560	0/0:35,0:34:49.24:0,49,746	0/0:28,0:28:26.98:0,27,403	0/1:31,0:31:45.81:46,0,722	0/0:42,0:42:55.86:0,56,536	0/1:10,15:25:61.93:365,0,62	0/1:35,0:35:30.60:31,0,867	0/1:26,0:26:24.43:24,0,699	0/0:28,0:26:55.72:0,56,584	0/0:38,0:38:47.60:0,48,386	0/0:28,0:28:44.46:0,44,343	0/0:21,0:20:30.20:0,30,355	0/0:22,0:22:23.81:0,24,204	0/0:31,0:31:46.05:0,46,413	0/1:27,0:27:23.35:23,0,773	0/1:21,0:21:21.01:21,0,456	0/0:36,0:36:36.72:0,37,328	0/0:7,0:7:7.96:0,8,155
chr10	49345092	.	T	TTGTATTGTAT	8634.79	PASS	AB=0.990;AC=25;AF=0.446;AN=56;BaseQRankSum=0.089;DP=944;FS=4.198;HRun=0;HaplotypeScore=307.1909;InbreedingCoeff=0.6886;MQ=73.08;MQ0=35;MQRankSum=-8.815;QD=14.96;ReadPosRankSum=-4.344;VQSLOD=2.6315;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:35,0:36:6.09:6,0,1302	1/1:16,0:16:39.13:895,39,0	0/1:72,0:29:23.52:24,0,184	0/1:124,0:62:66.32:66,0,158	0/0:25,0:24:45.12:0,45,1052	0/0:20,0:20:42.11:0,42,965	0/0:29,0:29:2.31:0,2,968	0/0:46,0:36:32.95:0,33,423	0/0:28,0:28:57.13:0,57,1233	0/0:47,0:45:25.17:0,25,1685	0/0:22,0:22:39.10:0,39,806	0/1:31,0:30:1.03:1383,0,1	1/1:14,6:21:20.92:634,21,0	0/1:32,0:32:0.82:1,0,1152	1/1:39,0:39:71.01:944,71,0	0/0:25,0:25:24.03:0,24,578	0/0:31,0:31:69.51:0,70,1862	0/0:30,0:30:57.01:0,57,1439	1/1:39,0:27:50.56:801,51,0	1/1:38,0:38:50.11:720,50,0	1/1:25,0:25:33.01:449,33,0	1/1:22,0:21:32.96:670,33,0	1/1:16,0:16:20.99:308,21,0	1/1:32,0:32:39.72:750,40,0	0/0:33,0:33:48.13:0,48,1239	0/0:22,0:20:38.79:0,39,1020	1/1:31,0:31:54.10:983,54,0	0/0:9,0:9:18.06:0,18,479
chr10	49345624	.	C	CT	8227.45	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-16.336;DP=605;FS=2.682;HRun=7;HaplotypeScore=53.2919;InbreedingCoeff=0.9727;MQ=66.31;MQ0=2;MQRankSum=0.022;QD=30.36;ReadPosRankSum=1.280;VQSLOD=5.2194;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:87.03:0,87,811	0/0:8,0:8:21:0,21,190	0/0:18,0:16:12.22:0,12,178	0/0:4,0:4:5.11:0,5,63	1/1:6,26:32:78.24:942,78,0	0/0:21,0:21:60.09:0,60,575	0/0:16,0:16:35.98:0,36,332	1/1:4,43:46:99:1486,126,0	0/0:16,0:16:36.04:0,36,343	1/1:3,19:22:57.17:689,57,0	1/1:3,21:24:56.99:632,57,0	0/0:14,0:14:42.07:0,42,405	0/0:27,0:27:75.10:0,75,719	1/1:0,11:11:33.10:399,33,0	0/0:27,0:27:75.07:0,75,704	0/0:11,0:11:24.03:0,24,228	1/1:4,32:36:90.27:1083,90,0	1/1:1,36:36:93.29:1123,93,0	0/0:24,0:23:60.05:0,60,563	0/0:27,0:27:63.09:0,63,607	0/0:17,0:17:45.04:0,45,424	0/0:10,0:10:27.03:0,27,257	0/0:18,0:18:51:0,51,461	0/0:16,0:16:47.99:0,48,441	1/1:0,18:19:48.01:558,48,0	1/1:1,26:27:78.11:874,78,0	0/0:27,0:27:78.10:0,78,743	1/1:3,13:16:13.15:442,13,0
chr10	49346008	.	ATGTG	A	2186.13	PASS	AC=14;AF=0.259;AN=54;BaseQRankSum=3.026;DP=600;FS=14.111;HRun=0;HaplotypeScore=111.6055;InbreedingCoeff=0.8565;MQ=67.98;MQ0=8;MQRankSum=1.615;QD=16.82;ReadPosRankSum=2.686;VQSLOD=2.5186;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:30:50.88:0,51,1027	1/1:7,2:10:9.02:121,9,0	0/0:22,0:15:0:0,0,0	./.	0/0:17,0:22:8.96:0,9,123	0/0:29,0:32:50.91:0,51,1141	0/0:19,0:19:30.05:0,30,545	0/0:24,0:24:16.30:0,16,270	0/0:24,0:24:36.14:0,36,779	0/0:27,0:27:33.11:0,33,645	0/0:18,0:23:7.54:0,8,145	1/1:12,10:22:24.08:379,24,0	1/1:10,8:18:9:272,9,0	0/0:19,0:19:8.94:0,9,124	1/1:9,13:23:29.95:454,30,0	0/0:13,0:12:6.49:0,6,119	0/0:19,0:30:12.04:0,12,214	0/0:15,0:17:12.50:0,12,192	0/0:19,0:19:19.30:0,19,320	0/0:17,0:29:47.80:0,48,722	0/0:10,0:14:20.59:0,21,357	1/1:8,7:15:21.06:292,21,0	1/1:6,11:17:24.08:379,24,0	1/1:9,15:25:30.10:473,30,0	0/0:9,0:15:6.02:0,6,118	0/0:19,0:22:33.11:0,33,590	0/0:19,0:25:30.10:0,30,565	0/0:4,0:8:9.03:0,9,158
chr10	49346017	.	T	TGTGTGT	1430.90	PASS	AB=1.000;AC=24;AF=0.462;AN=52;BaseQRankSum=-4.184;DP=581;FS=8.616;HRun=0;HaplotypeScore=133.4063;InbreedingCoeff=0.6201;MQ=59.60;MQ0=14;MQRankSum=-3.932;QD=5.22;ReadPosRankSum=-1.726;VQSLOD=1.7528;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:35,0:34:20.31:20,0,707	0/0:9,0:9:8.24:0,8,90	./.	./.	1/1:23,0:23:6.02:134,6,0	0/0:31,0:31:45.13:0,45,817	0/0:20,0:20:21.05:0,21,390	1/1:20,0:20:6.87:78,7,0	0/0:20,0:20:28.88:0,29,512	1/1:22,0:22:12.03:236,12,0	1/1:23,0:22:2.26:95,2,0	0/0:25,0:25:24.55:0,25,335	0/0:16,0:16:21.07:0,21,292	1/1:8,6:15:2.99:24,3,0	0/0:24,0:24:29.85:0,30,418	1/1:12,0:10:3.01:79,3,0	1/1:32,0:31:9.03:171,9,0	1/1:13,0:13:6.02:148,6,0	0/0:18,0:16:2.01:0,2,60	0/1:30,0:30:20.24:20,0,144	0/0:16,0:15:7.36:0,7,88	0/0:16,0:16:21.07:0,21,340	0/0:17,0:17:24.08:0,24,335	0/0:27,0:27:30.10:0,30,419	1/1:17,0:16:5.85:53,6,0	1/1:24,0:23:14.06:267,14,0	0/0:25,0:24:15.02:0,15,195	1/1:8,0:8:9.03:290,9,0
chr10	49346455	.	AT	A	3883.61	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=13.175;DP=611;FS=4.311;HRun=8;HaplotypeScore=60.4942;InbreedingCoeff=0.9336;MQ=69.19;MQ0=0;MQRankSum=-0.106;QD=24.43;ReadPosRankSum=3.061;VQSLOD=4.5990;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,108,1269	1/1:0,9:9:24.04:232,24,0	0/0:8,0:8:8.61:0,9,79	0/1:9,0:8:1.62:2,0,91	0/0:31,0:31:87.27:0,87,1051	0/0:24,0:24:66.20:0,66,797	0/0:12,0:12:30.08:0,30,352	0/0:27,0:27:60.18:0,60,725	0/0:13,0:13:36.11:0,36,435	0/0:21,0:21:60.18:0,60,725	0/0:21,0:20:57.17:0,57,678	1/1:1,18:19:54.09:522,54,0	1/1:2,22:24:60.09:579,60,0	0/0:32,0:32:93.29:0,93,1124	1/1:1,32:33:90.14:869,90,0	0/0:29,0:29:84.26:0,84,1015	0/0:27,0:27:72.14:0,72,827	0/0:23,0:23:60.14:0,60,698	0/0:17,0:17:45.14:0,45,544	0/0:28,0:28:78.23:0,78,931	0/0:13,0:13:33.09:0,33,386	1/1:1,18:19:54.08:521,54,0	1/1:3,22:25:62.93:608,63,0	1/1:1,20:21:57.09:550,57,0	0/0:19,0:18:54.17:0,54,652	0/0:25,0:25:63.18:0,63,751	0/0:28,0:28:78.24:0,78,942	0/0:16,0:16:30.09:0,30,362
chr10	49347777	.	GAT	G	4448.54	PASS	AB=0.750;AC=36;AF=0.818;AN=44;BaseQRankSum=-2.561;DP=248;FS=5.588;HRun=0;HaplotypeScore=36.9770;InbreedingCoeff=0.4190;MQ=81.68;MQ0=2;MQRankSum=-0.899;QD=21.59;ReadPosRankSum=2.685;VQSLOD=4.0935;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:6,3:9:88.85:89,0,170	./.	./.	0/0:14,0:11:14.40:0,14,142	1/1:5,12:17:33.10:401,33,0	1/1:2,12:15:35.78:394,36,0	1/1:2,7:9:15.05:183,15,0	1/1:5,14:19:36.03:368,36,0	1/1:2,7:9:21.07:256,21,0	1/1:2,15:17:45.09:502,45,0	1/1:3,9:13:23.91:270,24,0	./.	0/0:1,0:1:0:0,0,0	1/1:1,5:6:15.05:183,15,0	./.	0/1:6,3:9:24.62:25,0,75	1/1:5,15:19:39.12:476,39,0	1/1:1,2:3:3.01:37,3,0	1/1:0,3:4:11.87:124,12,0	1/1:2,8:10:15.05:179,15,0	1/1:2,7:9:18.06:220,18,0	./.	./.	0/0:5,0:5:3:0,3,28	1/1:2,7:9:12.01:211,12,0	1/1:4,9:13:27.08:329,27,0	1/1:3,4:8:6.75:127,7,0	1/1:3,2:5:6.02:73,6,0
chr10	49347912	.	TATCAAACA	T	1540.27	PASS	AC=12;AF=0.353;AN=34;BaseQRankSum=3.547;DP=111;FS=5.890;HRun=0;HaplotypeScore=26.4642;InbreedingCoeff=0.6409;MQ=89.48;MQ0=4;MQRankSum=-5.749;QD=59.24;ReadPosRankSum=1.922;VQSLOD=1.9104;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:2,0:2:6.02:0,6,225	./.	0/0:12,0:7:18.06:0,18,647	0/0:35,0:10:13.94:0,14,405	./.	0/0:2,0:1:3.01:0,3,129	0/0:3,0:3:9.03:0,9,388	1/1:2,8:9:24.08:650,24,0	0/0:3,0:3:9.03:0,9,355	1/1:0,4:4:9.01:180,9,0	./.	./.	./.	1/1:0,1:1:3.01:39,3,0	./.	0/0:1,0:1:3.01:0,3,117	./.	./.	0/0:2,0:2:6.02:0,6,205	0/0:6,0:6:18.06:0,18,627	0/0:1,0:1:3.01:0,3,113	./.	./.	./.	1/1:0,6:6:15.05:406,15,0	1/1:0,4:4:12.04:325,12,0	0/0:1,0:1:3.01:0,3,113	1/1:1,0:1:3.01:75,3,0
chr10	49347914	.	TCAAACA	T	1027.17	PASS	AC=12;AF=0.353;AN=34;BaseQRankSum=5.052;DP=110;FS=5.431;HRun=0;HaplotypeScore=26.6737;InbreedingCoeff=0.6769;MQ=90.95;MQ0=3;MQRankSum=-5.335;QD=39.51;ReadPosRankSum=1.778;VQSLOD=2.5075;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:2,0:2:6.02:0,6,226	./.	0/0:10,0:7:18.06:0,18,628	0/0:31,0:10:14.32:0,14,407	./.	0/0:2,0:1:3.01:0,3,113	0/0:5,0:5:15.05:0,15,564	1/1:10,0:9:22.95:373,23,0	0/0:3,0:3:9.03:0,9,338	1/1:4,0:4:9.01:160,9,0	./.	./.	./.	1/1:1,0:1:2.96:19,3,0	./.	0/0:1,0:1:3.01:0,3,103	./.	./.	0/0:3,0:3:9.03:0,9,335	0/0:8,0:8:24.08:0,24,836	0/0:1,0:1:3.01:0,3,112	./.	./.	./.	1/1:6,0:6:15.05:306,15,0	1/1:4,0:4:12.04:230,12,0	0/0:2,0:2:6.02:0,6,225	1/1:0,1:1:3.01:75,3,0
chr10	49348925	.	T	TAGA	22093.82	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-3.682;DP=710;FS=1.728;HRun=0;HaplotypeScore=109.5240;InbreedingCoeff=0.9951;MQ=82.26;MQ0=0;MQRankSum=-2.817;QD=49.99;ReadPosRankSum=-0.048;VQSLOD=6.8159;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,105,1683	1/1:1,5:7:15.05:318,15,0	0/0:28,0:28:52.03:0,52,779	0/0:20,0:20:38.92:0,39,603	1/1:2,26:29:69.04:1264,69,0	0/0:27,0:27:78.27:0,78,1250	0/0:15,0:15:45.15:0,45,723	1/1:11,29:40:96.33:2092,96,0	0/0:33,0:33:87.30:0,87,1397	1/1:6,20:28:72.23:1515,72,0	1/1:2,5:8:18.02:349,18,0	1/1:3,33:38:90.27:1912,90,0	1/1:5,18:23:48.16:1059,48,0	1/1:2,28:31:75.21:1583,75,0	1/1:5,28:34:81.23:1731,81,0	1/1:4,26:30:33.05:1673,33,0	1/1:1,25:27:72.10:1588,72,0	1/1:3,27:31:75.26:1656,75,0	0/0:18,0:18:42.14:0,42,675	0/0:20,0:20:45.04:0,45,722	0/0:38,0:38:99:0,108,1723	1/1:8,16:25:45.11:931,45,0	1/1:2,17:20:44.93:900,45,0	1/1:3,15:19:33.07:681,33,0	1/1:1,16:19:42.14:926,42,0	1/1:3,21:27:75.18:1517,75,0	0/0:30,0:30:84.29:0,84,1350	1/1:0,6:6:18.06:397,18,0
chr10	49349590	.	ATG	A	3786.28	PASS	AC=18;AF=0.333;AN=54;BaseQRankSum=1.164;DP=584;FS=4.089;HRun=0;HaplotypeScore=112.5612;InbreedingCoeff=0.9000;MQ=74.51;MQ0=5;MQRankSum=3.169;QD=26.29;ReadPosRankSum=-0.512;VQSLOD=4.4415;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:69.21:0,69,1106	0/0:13,0:13:27.09:0,27,462	0/0:31,0:23:51.13:0,51,775	0/0:39,0:32:79.81:0,80,1229	1/1:16,0:15:3.01:30,3,0	0/0:29,0:28:59.33:0,59,757	0/0:19,0:19:56.95:0,57,820	1/1:0,22:22:66.22:910,66,0	0/0:21,0:21:53.89:0,54,740	1/1:21,0:21:57.14:739,57,0	./.	0/0:19,0:19:47.20:0,47,697	0/0:24,0:24:66.30:0,66,993	1/1:16,2:18:4.24:445,4,0	0/0:19,0:19:53.32:0,53,777	0/0:31,0:31:75.22:0,75,1034	1/1:21,2:23:50.35:546,50,0	1/1:12,0:12:22.80:294,23,0	0/0:17,0:17:48.16:0,48,793	0/0:12,0:12:23.55:0,24,303	0/0:32,0:31:57.16:0,57,900	0/0:25,0:25:48.98:0,49,752	0/0:22,0:22:54.79:0,55,801	0/0:28,0:27:57.17:0,57,939	1/1:7,0:7:6.01:64,6,0	1/1:20,0:20:57.16:727,57,0	0/0:12,0:11:21.07:0,21,329	1/1:5,0:5:3.01:30,3,0
chr10	49349593	.	TGTAC	T	3967.85	PASS	AB=0.968;AC=15;AF=0.278;AN=54;BaseQRankSum=-1.171;DP=591;FS=4.016;HRun=0;HaplotypeScore=134.6073;InbreedingCoeff=0.6348;MQ=67.26;MQ0=6;MQRankSum=3.205;QD=25.93;ReadPosRankSum=0.262;VQSLOD=3.1393;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:72.22:0,72,1287	0/0:12,0:12:27.09:0,27,589	0/0:26,0:18:51.13:0,51,775	0/0:35,0:28:77.73:0,78,1221	1/1:1,16:17:2.99:63,3,0	0/0:26,0:25:58.30:0,58,765	0/0:19,0:19:57.13:0,57,837	1/1:27,0:26:66.17:910,66,0	0/0:21,0:21:51.84:0,52,792	1/1:0,20:20:60.19:834,60,0	./.	0/0:19,0:19:51.05:0,51,890	0/0:24,0:24:72.20:0,72,1190	0/1:17,0:19:12.72:526,0,13	0/0:19,0:19:54.15:0,54,887	0/0:34,0:34:51.86:0,52,638	0/1:25,0:25:99:380,0,196	0/1:10,0:10:22.07:261,0,22	0/0:19,0:18:51.16:0,51,936	0/0:13,0:13:30:0,30,404	0/0:37,0:36:65.96:0,66,1176	0/0:22,0:22:53.98:0,54,948	0/0:24,0:24:59.93:0,60,865	0/0:35,0:34:37.09:0,37,1203	1/1:1,7:9:6.02:97,6,0	1/1:0,2:19:57.19:834,57,0	0/0:10,0:9:21.07:0,21,405	1/1:1,5:5:3.01:63,3,0
chr10	49349595	.	TAC	T	1025.24	PASS	AB=0.918;AC=24;AF=0.480;AN=50;BaseQRankSum=1.653;DP=650;FS=18.635;HRun=0;HaplotypeScore=133.2143;InbreedingCoeff=0.2523;MQ=65.16;MQ0=6;MQRankSum=-0.993;QD=3.02;ReadPosRankSum=1.943;VQSLOD=1.6976;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:33.08:0,33,435	0/0:13,0:13:12.04:0,12,178	./.	./.	1/1:19,0:18:2.95:20,3,0	1/1:16,10:26:20.89:208,21,0	1/1:17,3:20:9.49:98,9,0	0/0:28,0:27:0:0,0,0	0/1:15,5:21:68.04:123,0,68	1/1:21,0:21:8.90:71,9,0	./.	0/1:16,2:19:72.97:73,0,179	0/1:22,2:24:43.03:43,0,156	0/1:20,1:21:5.02:82,0,5	0/1:15,4:19:65.40:65,0,74	1/1:15,0:34:37.09:194,37,0	0/0:29,0:29:31.26:0,31,598	0/0:16,0:15:17.99:0,18,216	0/0:17,0:22:25.30:0,25,294	0/0:23,0:23:12.03:0,12,150	0/0:47,0:46:38.99:0,39,380	0/1:20,1:22:38.32:38,0,224	0/1:23,0:23:20.24:55,0,20	0/1:35,0:34:6.35:6,0,239	1/1:10,0:10:3.44:20,3,0	1/1:19,0:19:14.29:79,14,0	0/0:12,0:15:12:0,12,116	1/1:6,0:5:2.97:20,3,0
chr10	49349648	.	C	CTA	7924.17	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-9.381;DP=710;FS=0.734;HRun=0;HaplotypeScore=120.1790;InbreedingCoeff=0.9941;MQ=70.96;MQ0=13;MQRankSum=-0.713;QD=50.80;ReadPosRankSum=1.661;VQSLOD=5.1465;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:32:75.23:0,75,1175	1/1:1,11:12:33.11:641,33,0	0/0:39,0:29:80.99:0,81,1192	0/0:54,0:34:79.92:0,80,1375	0/0:28,0:27:66.21:0,66,1047	0/0:20,0:20:57.18:0,57,902	0/0:25,0:25:69.22:0,69,1110	0/0:33,0:32:87.25:0,87,1369	0/0:23,0:23:63.20:0,63,1002	0/0:18,0:18:54.17:0,54,832	0/0:13,0:13:36.11:0,36,561	1/1:1,19:22:60.20:1161,60,0	1/1:2,19:21:57.20:1156,57,0	0/0:21,0:21:54.18:0,54,882	1/1:0,20:21:54.19:1088,54,0	0/0:36,0:36:81.18:0,81,1291	0/0:35,0:35:96.31:0,96,1536	0/0:17,0:17:51.17:0,51,831	0/0:20,0:19:57.18:0,57,894	0/0:29,0:29:54.03:0,54,881	0/0:48,0:48:95.92:0,96,1553	1/1:0,23:24:59.88:1133,60,0	1/1:1,23:25:66.21:1306,66,0	1/1:1,29:29:75.18:1440,75,0	0/0:25,0:25:60.18:0,60,953	0/0:17,0:17:48.15:0,48,743	0/0:15,0:15:26.96:0,27,440	0/0:5,0:4:12.04:0,12,196
chr10	49350766	.	CTTG	C	8225.47	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=14.356;DP=758;FS=17.763;HRun=0;HaplotypeScore=115.3616;InbreedingCoeff=0.9986;MQ=89.10;MQ0=0;MQRankSum=-4.386;QD=38.44;ReadPosRankSum=-0.254;VQSLOD=4.1915;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,129,2871	0/0:13,0:13:39.13:0,39,851	0/0:29,0:29:56.32:0,56,1469	0/0:30,0:30:69.35:0,69,1566	1/1:4,9:13:18.06:293,18,0	0/0:22,0:22:57.20:0,57,1272	0/0:27,0:27:78.24:0,78,1657	1/1:3,26:29:78.25:1241,78,0	0/0:36,0:36:99:0,105,2263	1/1:1,15:16:42.13:652,42,0	1/1:1,11:12:27.05:412,27,0	0/0:41,0:41:99:0,111,2478	0/0:26,0:26:72.25:0,72,1607	1/1:3,23:26:54.18:882,54,0	0/0:43,0:43:99:0,117,2614	0/0:32,0:32:93.32:0,93,2075	1/1:2,21:23:57.67:932,58,0	1/1:1,28:29:72.25:1176,72,0	0/0:24,0:24:54.17:0,54,1152	0/0:13,0:13:39.13:0,39,855	0/0:47,0:47:99:0,117,2580	0/0:27,0:27:57.18:0,57,1228	0/0:15,0:15:42.14:0,42,921	0/0:32,0:32:87.30:0,87,1943	1/1:4,20:24:48.16:783,48,0	1/1:3,24:27:72.25:1168,72,0	0/0:38,0:37:99:0,111,2433	1/1:1,14:15:42.14:686,42,0
chr10	49352379	.	CAT	C	733.28	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-1.610;DP=672;FS=1.922;HRun=0;HaplotypeScore=122.7974;InbreedingCoeff=0.9949;MQ=77.16;MQ0=1;MQRankSum=-2.604;QD=38.59;ReadPosRankSum=0.085;VQSLOD=5.0040;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,120,2598	0/0:9,0:9:27.09:0,27,532	0/0:26,0:26:68.33:0,68,1204	0/0:20,0:18:47.53:0,48,711	0/0:26,0:26:78.22:0,78,1458	0/0:20,0:20:60.19:0,60,1180	0/0:30,0:30:87.25:0,87,1640	0/0:28,0:28:84.26:0,84,1557	0/0:24,0:24:72.21:0,72,1352	0/0:23,0:23:69.22:0,69,1335	0/0:21,0:21:60.15:0,60,1061	0/0:21,0:21:63.17:0,63,1150	0/0:24,0:24:72.10:0,72,1341	0/0:28,0:28:81.21:0,81,1434	0/0:24,0:24:72.23:0,72,1423	1/1:0,19:18:51.17:828,51,0	0/0:19,0:19:57.18:0,57,1104	0/0:16,0:16:48.15:0,48,937	0/0:28,0:27:84.16:0,84,1393	0/0:36,0:36:99:0,108,2082	0/0:24,0:24:72.16:0,72,1275	0/0:23,0:23:66.20:0,66,1298	0/0:18,0:18:54.16:0,54,1023	0/0:37,0:37:99:0,111,2095	0/0:21,0:21:63.20:0,63,1232	0/0:25,0:25:72.24:0,72,1411	0/0:27,0:27:81.19:0,81,1491	0/0:7,0:7:21.02:0,21,314
chr10	49352938	.	AT	A	3950.98	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=7.757;DP=629;FS=16.355;HRun=8;HaplotypeScore=98.5043;InbreedingCoeff=0.9982;MQ=66.51;MQ0=0;MQRankSum=-3.180;QD=24.85;ReadPosRankSum=3.704;VQSLOD=2.5106;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:83.86:0,84,971	1/1:0,15:15:42.06:403,42,0	0/0:19,0:18:48.14:0,48,572	0/0:20,0:19:36.86:0,37,377	0/0:39,0:39:99:0,99,1172	0/0:20,0:20:60.18:0,60,725	0/0:16,0:16:45.07:0,45,525	0/0:36,0:36:99:0,99,1196	0/0:20,0:20:48.15:0,48,580	0/0:32,0:32:75.23:0,75,906	0/0:27,0:28:68.95:0,69,763	1/1:2,15:17:48.06:457,48,0	1/1:6,21:27:75.10:718,75,0	0/0:19,0:19:57.17:0,57,676	1/1:2,17:19:51.08:492,51,0	1/1:3,19:22:51.08:493,51,0	0/0:20,0:20:47.89:0,48,540	0/0:21,0:21:62.86:0,63,732	0/0:13,0:13:39.12:0,39,471	0/0:27,0:27:81.25:0,81,979	0/0:7,0:7:18.06:0,18,217	1/1:2,23:25:63.10:607,63,0	1/1:2,21:23:57.08:550,57,0	1/1:1,10:10:24.04:232,24,0	0/0:26,0:26:69.20:0,69,823	0/0:22,0:22:60.18:0,60,720	0/0:40,0:40:99:0,117,1403	0/0:13,0:13:30.09:0,30,362
chr10	49352998	.	A	ATCTC	27326.12	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=15.511;DP=698;FS=1.316;HRun=0;HaplotypeScore=144.3856;InbreedingCoeff=0.9968;MQ=72.71;MQ0=0;MQRankSum=-10.522;QD=64.15;ReadPosRankSum=3.922;VQSLOD=6.9513;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:28:14.47:0,14,1378	1/1:1,12:13:33.11:918,33,0	0/0:18,0:19:48.16:0,48,890	0/0:28,0:28:63.22:0,63,1204	1/1:6,39:50:99:3410,123,0	0/0:20,0:20:60.19:0,60,1154	0/0:19,0:19:57.18:0,57,1091	1/1:14,19:37:99:2493,102,0	0/0:19,0:19:54.17:0,54,1034	1/1:7,13:25:69.21:1606,69,0	1/1:5,29:36:78.27:2173,78,0	1/1:3,16:19:51.18:1423,51,0	1/1:5,18:24:54.17:1448,54,0	1/1:6,19:27:57.20:1557,57,0	1/1:4,14:19:51.16:1329,51,0	0/0:23,0:23:60.21:0,60,1187	1/1:4,16:23:45.15:1252,45,0	1/1:3,15:19:51.18:1401,51,0	0/0:21,0:21:63.22:0,63,1242	0/0:39,0:39:99:0,114,2241	0/0:12,0:12:36.12:0,36,708	1/1:2,17:22:42.14:1165,42,0	1/1:5,26:34:69.24:1921,69,0	1/1:1,10:10:21.07:586,21,0	1/1:0,30:32:81.28:2263,81,0	1/1:2,16:20:51.18:1377,51,0	0/0:44,0:44:99:0,132,2563	1/1:2,13:15:36.12:1005,36,0
chr10	49353261	.	A	ATTAT	8382.38	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-13.654;DP=638;FS=2.290;HRun=0;HaplotypeScore=98.2321;InbreedingCoeff=0.9969;MQ=70.29;MQ0=1;MQRankSum=-1.050;QD=63.03;ReadPosRankSum=2.153;VQSLOD=6.9445;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:90.22:0,90,1589	1/1:5,5:10:18.06:449,18,0	0/0:18,0:18:39.13:0,39,680	0/0:17,0:17:48.03:0,48,883	0/0:42,0:42:99:0,111,1909	0/0:28,0:28:84.27:0,84,1495	0/0:14,0:14:33.11:0,33,607	0/0:33,0:33:87.29:0,87,1537	0/0:21,0:21:60.19:0,60,1067	0/0:28,0:28:72.23:0,72,1263	0/0:23,0:23:66.21:0,66,1182	1/1:3,27:30:84.29:2127,84,0	1/1:5,14:20:45.15:1172,45,0	0/0:23,0:23:69.22:0,69,1223	1/1:3,15:18:42.14:1109,42,0	0/0:20,0:20:57.18:0,57,1014	0/0:22,0:21:57.14:0,57,1012	0/0:18,0:18:51.07:0,51,899	0/0:23,0:23:57.19:0,57,1045	0/0:31,0:31:81.26:0,81,1459	0/0:19,0:19:51.17:0,51,932	1/1:4,14:18:45.15:1173,45,0	1/1:2,20:21:57.20:1482,57,0	1/1:2,13:15:33.11:871,33,0	0/0:18,0:18:51.16:0,51,908	0/0:30,0:30:87.30:0,87,1601	0/0:34,0:34:93.30:0,93,1673	0/0:10,0:10:18.06:0,18,314
chr10	49353622	.	A	ACGGTGG	9372.74	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=1.318;DP=664;FS=27.898;HRun=0;HaplotypeScore=181.1097;InbreedingCoeff=0.9746;MQ=66.29;MQ0=9;MQRankSum=-4.032;QD=50.39;ReadPosRankSum=-1.055;VQSLOD=3.0903;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,141,2247	1/1:10,1:11:23.75:355,24,0	0/0:20,0:16:45.05:0,45,641	0/0:31,0:21:31.94:0,32,676	0/0:25,0:24:42.04:0,42,700	0/0:19,0:18:54.08:0,54,830	0/0:15,0:14:42.03:0,42,664	0/0:25,0:25:75.10:0,75,1046	0/0:28,0:28:84.23:0,84,1647	0/0:22,0:21:32.37:0,32,987	0/0:9,0:9:23.76:0,24,298	1/1:28,3:33:90.12:2111,90,0	1/1:35,2:37:99:2228,105,0	0/0:16,0:16:42.03:0,42,741	1/1:35,3:41:99:2506,117,0	0/0:29,0:29:61.65:0,62,1400	0/0:15,0:15:44.90:0,45,633	0/0:14,0:14:11.96:0,12,525	0/0:25,0:25:71.86:0,72,909	0/0:24,0:24:69.02:0,69,1290	0/0:38,0:37:96.24:0,96,2034	1/1:13,3:18:39.19:531,39,0	1/1:20,0:19:50.66:640,51,0	1/1:23,2:25:45.84:1002,46,0	0/0:25,0:25:64.60:0,65,975	0/0:24,0:23:51.02:0,51,900	0/0:25,0:25:47.84:0,48,798	0/0:2,0:2:6.02:0,6,147
chr10	49353637	.	GTGATGATGATGA	G	1590.38	PASS	AB=0.952;AC=17;AF=0.315;AN=54;BaseQRankSum=-0.394;DP=624;FS=7.964;HRun=0;HaplotypeScore=249.9619;InbreedingCoeff=0.4538;MQ=52.55;MQ0=41;MQRankSum=-4.732;QD=7.50;ReadPosRankSum=-2.627;VQSLOD=1.1323;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:37:62.82:0,63,2463	0/0:10,0:10:12.02:0,12,274	./.	0/0:23,0:13:0:0,0,0	0/0:14,7:19:1.08:0,1,3	0/0:19,0:15:21.07:0,21,650	0/0:18,0:14:21.07:0,21,595	1/1:17,0:12:6.02:83,6,0	0/0:28,0:28:57.17:0,57,2321	0/1:15,7:20:63.70:147,0,64	1/1:8,0:7:6.44:35,6,0	0/0:39,0:37:17.68:0,18,1726	0/1:43,0:42:10.70:11,0,1632	1/1:16,0:16:14.42:560,14,0	0/1:41,0:40:6.72:7,0,1581	0/0:27,0:27:57.20:0,57,2555	0/1:12,0:12:5.02:292,0,5	1/1:10,0:10:8.62:193,9,0	0/0:15,0:14:14.26:0,14,249	0/0:26,0:24:30.08:0,30,467	0/0:57,0:52:78.18:0,78,1827	0/0:17,0:17:12.15:0,12,281	0/0:12,0:11:6.71:0,7,388	0/0:19,0:19:17.92:0,18,537	0/1:17,0:17:61.42:229,0,61	1/1:11,11:20:11.32:101,11,0	0/0:23,0:23:8.97:0,9,151	1/1:4,0:2:3.01:100,3,0
chr10	49353669	.	GATGA	G	275.12	PASS	AB=0.945;AC=10;AF=0.179;AN=56;BaseQRankSum=4.827;DP=625;FS=3.534;HRun=0;HaplotypeScore=176.8914;InbreedingCoeff=-0.0528;MQ=49.23;MQ0=50;MQRankSum=-1.712;QD=2.18;ReadPosRankSum=2.143;VQSLOD=2.8198;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:36:89.82:0,90,1827	0/0:8,0:8:12.03:0,12,218	0/0:10,0:4:12.04:0,12,163	0/0:15,0:3:6.02:0,6,86	0/1:12,4:15:20.98:21,0,29	0/0:17,0:12:33.11:0,33,637	0/0:25,0:21:41.05:0,41,933	0/0:19,0:13:39.05:0,39,474	0/0:26,0:26:68.30:0,68,1561	0/1:15,0:14:78.60:79,0,111	0/0:4,2:5:0.47:0,0,16	0/0:42,0:40:86.84:0,87,1411	0/0:45,0:44:83.65:0,84,1327	0/1:19,0:17:48.43:135,0,48	0/0:45,0:44:68.26:0,68,1126	0/0:29,0:28:81.24:0,81,1814	0/1:15,0:15:40.40:40,0,184	0/1:3,0:4:31.31:37,0,31	0/0:17,0:14:21.96:0,22,351	0/0:26,0:24:18.70:0,19,272	0/0:57,0:50:96.26:0,96,1659	0/0:21,0:20:8.57:0,9,204	0/0:20,0:18:20.67:0,21,306	0/0:27,0:27:30.10:0,30,554	0/1:10,0:10:3.38:3,0,66	0/1:23,1:21:61.05:61,0,178	0/1:20,0:20:4.28:4,0,34	1/1:3,0:1:3:29,3,0
chr10	49353673	.	ATGATGG	A	2785.66	PASS	AB=0.998;AC=27;AF=0.482;AN=56;BaseQRankSum=-0.112;DP=639;FS=17.647;HRun=0;HaplotypeScore=183.7077;InbreedingCoeff=-0.4216;MQ=50.10;MQ0=50;MQRankSum=-2.763;QD=5.16;ReadPosRankSum=4.500;VQSLOD=1.1266;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:40,0:33:99:144,0,614	0/1:8,0:8:19.36:19,0,35	0/0:12,0:5:7.42:0,7,48	0/0:17,0:3:1.48:0,1,22	0/1:16,0:15:37.02:37,0,40	0/1:16,0:11:69.64:70,0,108	0/1:26,0:22:99:229,0,105	0/0:18,0:12:8.88:0,9,66	0/1:28,0:28:99:175,0,578	0/1:16,0:15:22.94:75,0,23	0/1:8,0:7:8.18:8,0,22	0/1:42,0:40:99:260,0,261	0/1:43,0:43:99:205,0,201	0/1:20,0:18:61.82:158,0,62	0/1:45,0:45:99:148,0,204	0/0:30,0:29:84.10:0,84,1309	0/1:15,0:15:49.96:50,0,106	1/1:5,0:5:8.90:68,9,0	1/1:10,9:15:26.63:327,27,0	1/1:6,20:24:20.41:172,20,0	0/1:58,0:51:99:425,0,206	0/0:22,0:21:8.41:0,8,61	0/1:21,0:19:32.06:85,0,32	0/1:26,0:26:68.17:68,0,81	0/1:9,0:9:8.29:38,0,8	0/1:27,0:23:81.03:95,0,81	1/1:0,20:20:4.14:77,4,0	0/1:4,0:2:15.99:20,0,16
chr10	49353676	.	ATGGTGGTGG	A	2766.06	PASS	AB=0.653;AC=14;AF=0.250;AN=56;BaseQRankSum=2.723;DP=638;FS=1.187;HRun=0;HaplotypeScore=207.5347;InbreedingCoeff=0.6542;MQ=50.09;MQ0=50;MQRankSum=-5.646;QD=10.44;ReadPosRankSum=4.860;VQSLOD=2.2651;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:31:60.99:0,61,1336	1/1:5,3:8:3.01:84,3,0	0/0:15,0:6:15.29:0,15,222	0/0:19,0:3:6.02:0,6,117	0/0:16,0:15:8.43:0,8,165	0/0:15,0:10:18.04:0,18,321	0/0:26,0:22:41.98:0,42,487	0/0:20,0:14:20.94:0,21,397	0/0:28,0:29:72.08:0,72,1326	0/0:16,0:15:18.06:0,18,370	0/0:8,0:7:6.33:0,6,119	1/1:18,19:38:4.09:819,4,0	0/1:18,23:43:0.45:742,0,0	0/0:19,0:17:21.56:0,22,476	1/1:21,19:44:4.10:392,4,0	0/0:30,0:29:63.19:0,63,2073	0/0:15,0:15:27.09:0,27,590	0/0:5,0:5:4.56:0,5,44	0/0:18,0:15:7.31:0,7,202	0/0:25,0:23:33.90:0,34,314	1/1:59,0:52:23.63:342,24,0	0/1:12,11:22:0.24:0,0,0	1/1:8,11:18:10.02:244,10,0	1/1:9,0:26:10.42:302,10,0	0/0:8,0:8:3.48:0,3,34	0/0:27,0:23:27.08:0,27,529	0/0:20,0:20:3.81:0,4,10	0/0:4,0:2:3.01:0,3,68
chr10	49356407	.	CA	C	3642.93	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=13.910;DP=642;FS=1.622;HRun=8;HaplotypeScore=62.3307;InbreedingCoeff=0.9930;MQ=80.08;MQ0=0;MQRankSum=-2.853;QD=25.65;ReadPosRankSum=3.883;VQSLOD=4.4164;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:87.27:0,87,1050	1/1:0,7:7:21.03:202,21,0	0/0:23,0:23:44.60:0,45,490	0/0:7,0:7:15.03:0,15,168	0/0:38,0:38:99:0,105,1245	0/0:30,0:30:90.27:0,90,1078	0/0:22,0:22:57.17:0,57,689	0/0:30,0:30:84.26:0,84,1015	0/0:22,0:22:60.18:0,60,725	0/0:30,0:30:72.22:0,72,869	0/0:23,0:23:51.16:0,51,616	1/1:1,23:24:66.11:637,66,0	1/1:1,13:14:39.06:377,39,0	0/0:21,0:21:63.19:0,63,761	1/1:1,31:32:50.89:775,51,0	0/0:24,0:24:60.15:0,60,689	0/0:19,0:19:51.16:0,51,615	0/0:10,0:10:24.07:0,24,290	0/0:27,1:26:46.25:0,46,837	0/0:33,0:33:90.26:0,90,1070	0/0:11,0:11:30.09:0,30,362	1/1:2,25:27:72.11:695,72,0	1/1:1,25:26:66.10:637,66,0	1/1:1,11:12:33.05:319,33,0	0/0:27,0:27:78.24:0,78,942	0/0:33,0:33:93.29:0,93,1123	0/0:32,0:32:87.27:0,87,1051	0/0:5,0:5:15.05:0,15,181
chr10	49357205	.	TG	T	342.35	PASS	AB=0.775;AC=2;AF=0.036;AN=56;BaseQRankSum=6.281;DP=567;FS=5.519;HRun=1;HaplotypeScore=62.5711;InbreedingCoeff=-0.0371;MQ=67.05;MQ0=0;MQRankSum=1.089;QD=5.27;ReadPosRankSum=-1.700;VQSLOD=-0.1002;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:81.28:0,81,1293	0/0:8,0:8:24.05:0,24,358	0/1:23,11:26:99:218,0,772	0/1:23,8:28:99:214,0,765	0/0:26,0:26:78.16:0,78,1191	0/0:21,0:21:63.15:0,63,931	0/0:18,0:17:54.08:0,54,782	0/0:31,0:31:93.31:0,93,1466	0/0:16,0:16:48.16:0,48,764	0/0:25,0:25:75.25:0,75,1179	0/0:21,0:21:63.21:0,63,1002	0/0:19,0:19:57.14:0,57,864	0/0:12,0:12:36.10:0,36,549	0/0:14,0:14:42.12:0,42,642	0/0:14,0:13:39.12:0,39,600	0/0:14,0:14:42.13:0,42,648	0/0:15,0:15:45.14:0,45,687	0/0:17,0:17:48.16:0,48,766	0/0:17,0:17:51.17:0,51,814	0/0:29,0:29:87.28:0,87,1367	0/0:21,0:21:63.21:0,63,1004	0/0:19,0:19:54.17:0,54,840	0/0:17,0:17:51.16:0,51,779	0/0:16,0:16:45.15:0,45,718	0/0:19,0:19:54.18:0,54,862	0/0:20,0:20:60.20:0,60,938	0/0:33,0:33:99:0,99,1581	0/0:12,0:12:36.12:0,36,574
chr10	49357237	.	AT	A	394.66	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.060;DP=472;FS=4.558;HRun=7;HaplotypeScore=56.1169;InbreedingCoeff=0.7404;MQ=63.19;MQ0=0;MQRankSum=0.446;QD=24.67;ReadPosRankSum=0.899;VQSLOD=4.1194;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:60.18:0,60,741	0/0:10,0:10:24.04:0,24,285	0/0:10,0:10:4.01:0,4,53	0/0:7,0:6:3.01:0,3,38	0/0:26,0:26:66.21:0,66,823	0/0:16,0:16:45.13:0,45,554	0/0:13,0:12:36.10:0,36,440	0/0:39,1:40:80.74:0,81,1317	0/0:13,0:13:36.11:0,36,441	0/0:16,0:16:39.12:0,39,491	0/0:20,0:20:60.19:0,60,755	0/0:12,0:12:30.08:0,30,365	0/0:15,0:15:39.11:0,39,467	0/0:20,0:20:45.13:0,45,554	0/0:11,0:11:33.11:0,33,415	1/1:0,16:16:48.11:489,48,0	0/0:16,0:16:42.45:0,42,562	0/0:13,0:13:39.12:0,39,491	0/0:21,0:20:57.18:0,57,708	0/0:22,0:22:60.18:0,60,742	0/0:15,0:15:39.11:0,39,478	0/0:7,0:7:15.05:0,15,189	0/0:16,0:16:45.14:0,45,566	0/0:16,0:16:45.14:0,45,566	0/0:19,0:19:51.16:0,51,642	0/0:13,0:13:27.07:0,27,327	0/0:32,0:32:87.24:0,87,1076	0/0:15,0:15:33.09:0,33,402
chr10	49357283	.	A	ACTCT	5591.63	PASS	AB=1.000;AC=44;AF=0.815;AN=54;BaseQRankSum=0.622;DP=561;FS=1.566;HRun=0;HaplotypeScore=124.9125;InbreedingCoeff=0.6976;MQ=67.06;MQ0=10;MQRankSum=-0.414;QD=12.68;ReadPosRankSum=-3.399;VQSLOD=4.1254;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:15.03:0,15,211	1/1:4,1:12:17.80:293,18,0	./.	0/1:65,0:16:0:0,0,0	1/1:24,5:31:4.90:565,5,0	0/0:23,0:22:30.09:0,30,462	0/0:13,0:14:19:0,19,304	1/1:20,0:20:9.88:124,10,0	0/0:11,0:14:30.06:0,30,389	1/1:12,2:14:28.90:552,29,0	1/1:17,1:19:26.80:374,27,0	1/1:9,0:13:9.01:149,9,0	1/1:12,1:16:9.03:171,9,0	1/1:10,7:21:17.26:250,17,0	1/1:9,1:14:15.05:280,15,0	1/1:16,0:16:11.98:123,12,0	1/1:13,4:18:25.23:468,25,0	1/1:10,3:13:6.07:401,6,0	1/1:19,0:19:12.04:231,12,0	0/1:22,0:22:0:0,0,0	1/1:10,0:10:2.65:50,3,0	1/1:4,1:9:3.01:52,3,0	1/1:15,2:19:14.41:236,14,0	1/1:11,1:14:3.01:52,3,0	1/1:15,8:24:14.79:296,15,0	1/1:11,0:11:15.05:286,15,0	1/1:23,0:23:15.02:225,15,0	1/1:11,4:15:24.06:414,24,0
chr10	49357382	.	CATTTT	C	7082.14	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=2.969;DP=409;FS=5.206;HRun=0;HaplotypeScore=95.6369;InbreedingCoeff=0.9626;MQ=73.67;MQ0=0;MQRankSum=-1.924;QD=45.40;ReadPosRankSum=2.471;VQSLOD=4.9656;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:45.15:0,45,1322	0/0:5,0:5:15.05:0,15,335	0/0:11,0:12:18.03:0,18,395	0/0:12,0:11:6.02:0,6,177	1/1:0,18:18:42.14:814,42,0	0/0:12,0:12:30.56:0,31,820	0/0:14,0:14:33.11:0,33,970	1/1:8,14:22:42.14:776,42,0	0/0:10,0:10:27.09:0,27,794	1/1:0,14:14:42.13:781,42,0	1/1:4,20:24:51.17:989,51,0	0/0:10,0:10:21.07:0,21,476	0/0:16,0:16:33.11:0,33,754	1/1:0,13:13:33.11:640,33,0	0/0:11,0:11:27.09:0,27,617	0/0:17,0:17:48.16:0,48,1351	1/1:0,15:15:36.12:698,36,0	1/1:2,13:15:39.13:756,39,0	0/0:17,0:17:45.14:0,45,1236	0/0:28,0:27:75.26:0,75,2189	0/0:5,0:5:6.02:0,6,176	0/0:15,0:15:39.13:0,39,851	0/0:25,0:25:60.21:0,60,1395	0/0:9,0:9:18.06:0,18,402	1/1:0,12:12:27.09:524,27,0	1/1:2,13:15:36.12:698,36,0	0/0:19,0:19:45.14:0,45,1220	1/1:1,7:8:21.07:407,21,0
chr10	49357432	.	ATC	A	3195.78	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=9.340;DP=475;FS=4.234;HRun=0;HaplotypeScore=90.7262;InbreedingCoeff=0.9886;MQ=68.07;MQ0=0;MQRankSum=1.123;QD=30.44;ReadPosRankSum=2.721;VQSLOD=5.6779;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:57.15:0,57,970	1/1:0,7:7:21.07:301,21,0	0/0:12,0:11:30.09:0,30,469	0/0:7,0:7:18.06:0,18,327	0/0:25,0:25:72.12:0,72,1237	0/0:20,0:20:60.19:0,60,1064	0/0:12,0:12:36.10:0,36,597	0/0:28,0:28:78.23:0,78,1334	0/0:15,0:15:45.15:0,45,811	0/0:21,0:21:57.19:0,57,1014	0/0:27,0:27:81.26:0,81,1422	1/1:2,11:13:24.08:344,24,0	1/1:1,20:21:45.15:644,45,0	0/0:21,0:21:60.21:0,60,1094	1/1:0,15:15:39.13:558,39,0	0/0:17,0:17:48.15:0,48,828	0/0:22,0:22:60.19:0,60,1055	0/0:14,0:14:39.05:0,39,657	0/0:15,0:15:45.15:0,45,821	0/0:30,0:30:90.31:0,90,1610	0/0:4,0:4:12.04:0,12,219	1/1:0,13:13:33.11:473,33,0	1/1:1,25:26:48.08:688,48,0	1/1:0,10:10:27.09:387,27,0	0/0:16,0:16:42.14:0,42,761	0/0:21,0:21:63.16:0,63,1084	0/0:17,0:17:51.14:0,51,884	0/0:6,0:6:15:0,15,180
chr10	49358466	.	TTCTTG	T	2592.06	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=13.518;DP=539;FS=2.043;HRun=0;HaplotypeScore=123.5340;InbreedingCoeff=0.9931;MQ=66.32;MQ0=2;MQRankSum=-8.831;QD=30.49;ReadPosRankSum=0.409;VQSLOD=3.4309;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:44.94:0,45,1004	1/1:5,5:10:24:343,24,0	0/0:30,0:20:60.04:0,60,1026	0/0:18,0:13:30.29:0,30,470	0/0:31,0:31:93.20:0,93,2450	0/0:19,0:19:54.14:0,54,1361	0/0:18,0:18:48.11:0,48,1134	0/0:28,0:27:81.20:0,81,1684	0/0:16,0:16:48.16:0,48,1382	0/0:27,0:27:78.23:0,78,1907	0/0:26,0:26:75.18:0,75,1839	1/1:12,6:18:50.91:617,51,0	1/1:13,4:16:47.81:493,48,0	0/0:28,0:28:74.22:0,74,2044	1/1:6,9:15:44.91:629,45,0	0/0:18,0:18:54.16:0,54,1505	0/0:17,0:17:51.04:0,51,1304	0/0:16,0:16:45:0,45,952	0/0:26,0:26:78.19:0,78,1643	0/0:23,0:23:69.15:0,69,1600	0/0:12,0:12:36.09:0,36,906	1/1:3,2:5:14.99:183,15,0	1/1:8,4:13:38.70:425,39,0	1/1:7,0:7:14.84:101,15,0	0/0:17,0:17:51.15:0,51,1458	0/0:33,0:33:93.27:0,93,2286	0/0:27,0:27:78.23:0,78,2155	0/0:8,0:8:24.03:0,24,542
chr10	49358485	.	TG	T	1039.46	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=13.859;DP=543;FS=2.712;HRun=1;HaplotypeScore=87.4757;InbreedingCoeff=0.9892;MQ=59.49;MQ0=7;MQRankSum=-10.745;QD=11.95;ReadPosRankSum=-2.819;VQSLOD=1.1673;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:57.04:0,57,747	1/1:2,5:7:20.38:119,20,0	0/0:32,1:20:32.48:0,32,566	0/0:22,0:14:24.92:0,25,311	0/0:32,0:32:96.30:0,96,1334	0/0:18,0:18:51.13:0,51,689	0/0:15,0:15:45.14:0,45,625	0/0:25,0:25:58.82:0,59,902	0/0:18,0:18:54.17:0,54,753	0/0:25,0:25:72.23:0,72,1012	0/0:21,0:21:63.19:0,63,881	1/1:11,6:17:48.20:275,48,0	1/1:13,4:15:43.93:279,44,0	0/0:25,0:25:72.07:0,72,998	1/1:5,10:15:36.55:200,37,0	0/0:18,0:18:54.18:0,54,772	0/0:21,0:21:60.11:0,60,829	0/0:20,0:20:37.07:0,37,622	0/0:22,0:20:60.14:0,60,783	0/0:24,0:24:72.18:0,72,966	0/0:12,0:12:36.12:0,36,512	1/1:6,3:9:17.49:104,17,0	1/1:8,5:13:34.32:196,34,0	1/1:9,0:9:11.51:63,12,0	0/0:21,0:21:62.01:0,62,843	0/0:30,0:30:90.28:0,90,1249	0/0:29,0:29:87.26:0,87,1201	0/0:6,0:6:18.06:0,18,257
chr10	49358486	.	GT	G	844.52	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=11.439;DP=548;FS=1.831;HRun=5;HaplotypeScore=89.3986;InbreedingCoeff=0.9557;MQ=60.49;MQ0=7;MQRankSum=-9.697;QD=9.60;ReadPosRankSum=0.792;VQSLOD=0.7388;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:54.13:0,54,686	1/1:7,0:7:14.67:89,15,0	0/0:32,2:20:9.17:0,9,456	0/0:22,0:15:28.83:0,29,301	0/0:32,0:32:96.32:0,96,1310	0/0:18,0:18:51.15:0,51,666	0/0:15,0:15:42.14:0,42,573	0/0:25,0:25:71.89:0,72,923	0/0:18,0:18:51.17:0,51,697	0/0:24,0:24:69.23:0,69,944	0/0:21,0:21:60.20:0,60,820	1/1:14,3:17:32.43:246,32,0	1/1:13,4:15:20.53:164,21,0	0/0:25,0:25:69.22:0,69,927	1/1:13,3:16:25.96:232,26,0	0/0:19,0:19:57.18:0,57,763	0/0:21,0:21:63.17:0,63,834	0/0:19,1:21:20.82:0,21,581	0/0:21,0:19:54.17:0,54,720	0/0:24,0:24:66.21:0,66,885	0/0:12,0:12:36.09:0,36,460	1/1:4,5:9:14.22:130,14,0	1/1:11,2:13:16.83:120,17,0	1/1:7,2:9:5.34:54,5,0	0/0:22,0:22:66.17:0,66,866	0/0:30,0:30:84.27:0,84,1135	0/0:30,0:30:90.27:0,90,1192	0/0:6,0:6:18.06:0,18,246
chr10	49358488	.	TTTTGTTTTTG	T	2525.40	PASS	AB=0.955;AC=12;AF=0.214;AN=56;BaseQRankSum=11.653;DP=549;FS=2.542;HRun=0;HaplotypeScore=181.6762;InbreedingCoeff=0.7482;MQ=60.96;MQ0=7;MQRankSum=-8.973;QD=28.38;ReadPosRankSum=0.722;VQSLOD=3.4006;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:51.08:0,51,2102	1/1:2,5:7:15.05:390,15,0	0/0:33,0:21:38.85:0,39,1442	0/0:25,0:16:12.55:0,13,850	0/0:32,0:32:96.30:0,96,4400	0/0:18,0:18:48.16:0,48,2156	0/0:14,0:14:42.09:0,42,1702	0/0:27,0:27:78.26:0,78,3149	0/0:17,0:17:51.16:0,51,2286	0/0:23,0:23:69.24:0,69,3275	0/0:22,0:22:63.20:0,63,2673	1/1:11,6:17:31.82:593,32,0	1/1:14,4:16:8.36:331,8,0	0/0:24,0:24:69.20:0,69,2982	1/1:7,8:15:33.57:767,34,0	0/0:19,0:19:57.18:0,57,2618	0/0:21,0:21:63.16:0,63,2702	0/0:21,0:21:42.41:0,42,1900	0/0:20,0:18:51.16:0,51,2070	0/0:24,0:24:66.22:0,66,3008	0/0:12,0:12:30.09:0,30,1465	0/1:9,1:10:3.48:175,0,3	1/1:8,5:13:0.84:366,1,0	0/1:9,0:9:15.80:72,0,16	0/0:24,0:24:72.24:0,72,3101	0/0:29,0:29:81.26:0,81,3833	0/0:30,0:30:87.25:0,87,3770	0/0:6,0:6:18.06:0,18,870
chr10	49358815	.	AT	A	3562.83	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=0.183;DP=608;FS=2.675;HRun=8;HaplotypeScore=78.2894;InbreedingCoeff=0.9787;MQ=65.18;MQ0=0;MQRankSum=1.804;QD=25.45;ReadPosRankSum=1.872;VQSLOD=4.5329;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:63.14:0,63,733	1/1:0,8:8:24.04:232,24,0	0/0:8,0:6:9.02:0,9,97	0/0:13,0:12:9.34:0,9,180	0/0:46,0:46:99:0,126,1491	0/0:21,0:21:57.17:0,57,688	0/0:15,0:15:36.10:0,36,425	0/0:37,0:37:99:0,108,1273	0/0:15,0:15:42.13:0,42,506	0/0:36,0:36:99:0,99,1169	0/0:21,0:21:63.19:0,63,759	1/1:0,16:16:42.07:405,42,0	1/1:1,24:25:69.11:666,69,0	0/0:18,0:18:54.17:0,54,651	1/1:3,21:24:63.10:608,63,0	0/0:19,0:19:51.14:0,51,595	0/0:12,0:12:36.11:0,36,435	0/0:11,0:11:27.08:0,27,326	0/0:16,0:16:36.10:0,36,427	0/0:30,0:30:84.26:0,84,1015	0/0:16,0:16:39.11:0,39,460	1/1:2,21:23:57.09:550,57,0	1/1:2,24:26:69.11:666,69,0	1/1:3,15:18:44.77:434,45,0	0/0:34,0:34:99:0,99,1186	0/0:30,0:30:78.22:0,78,914	0/0:29,0:29:81.25:0,81,978	0/0:17,1:18:25.19:0,25,587
chr10	49359568	.	AATATATATAT	A	6862.93	PASS	AB=0.833;AC=30;AF=0.600;AN=50;BaseQRankSum=-0.939;DP=255;FS=5.327;HRun=0;HaplotypeScore=84.9749;InbreedingCoeff=0.6179;MQ=73.11;MQ0=0;MQRankSum=-4.188;QD=36.90;ReadPosRankSum=1.367;VQSLOD=3.7229;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:2,0:3:6.02:0,6,139	1/1:1,0:2:3.01:61,3,0	0/0:11,0:8:2.97:0,3,20	0/1:11,0:7:0.83:1,0,24	1/1:2,14:16:29.98:676,30,0	0/0:9,0:16:24.05:0,24,616	0/0:4,0:5:6.01:0,6,117	1/1:11,17:28:45.13:958,45,0	0/0:2,0:4:6.02:0,6,176	1/1:1,14:15:36.11:987,36,0	1/1:4,14:18:27.09:786,27,0	1/1:7,0:10:9.03:184,9,0	1/1:11,0:12:11.51:120,12,0	1/1:2,6:8:6.02:186,6,0	0/1:5,0:10:28.31:288,0,28	0/0:2,0:9:17.73:0,18,304	1/1:1,8:9:9.03:280,9,0	1/1:1,1:2:6.02:156,6,0	0/0:5,0:5:3.01:0,3,87	0/0:4,0:4:3:0,3,25	./.	./.	1/1:8,0:9:13.99:111,14,0	./.	1/1:5,8:13:15.05:466,15,0	1/1:2,15:17:45.15:1340,45,0	0/0:2,0:5:6.02:0,6,180	1/1:0,6:6:9.03:262,9,0
chr10	49359594	.	TATAC	T	713.44	PASS	AC=12;AF=0.231;AN=52;BaseQRankSum=2.230;DP=235;FS=1.953;HRun=0;HaplotypeScore=83.4070;InbreedingCoeff=0.7014;MQ=59.91;MQ0=2;MQRankSum=-1.793;QD=21.62;ReadPosRankSum=0.246;VQSLOD=3.4770;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:2,0:2:6.02:0,6,127	1/1:3,1:4:12.04:179,12,0	0/0:9,0:4:12.04:0,12,250	0/0:9,0:5:1.92:0,2,9	0/0:17,0:17:40.17:0,40,524	0/0:10,0:10:24.06:0,24,501	0/0:2,0:2:6.02:0,6,75	0/0:28,0:28:62.91:0,63,988	0/0:4,0:4:12.03:0,12,194	0/0:18,0:18:41.88:0,42,454	0/0:18,0:18:30.27:0,30,366	1/1:1,3:4:9.03:152,9,0	1/1:6,1:7:3.01:50,3,0	0/0:7,0:7:7.32:0,7,64	1/1:6,5:11:21.07:346,21,0	0/0:11,0:11:20.69:0,21,396	0/0:9,0:9:7.24:0,7,25	0/0:4,0:4:8.41:0,8,84	0/0:2,0:2:3.01:0,3,39	0/0:5,0:5:15.05:0,15,290	./.	1/1:1,0:1:3.01:47,3,0	1/1:4,2:6:5.81:95,6,0	./.	0/0:13,0:13:21.59:0,22,279	0/0:21,0:21:56.36:0,56,519	0/0:3,0:3:9.03:0,9,173	0/0:8,0:8:14.27:0,14,200
chr10	49359598	.	C	CAT	496.04	PASS	AC=12;AF=0.231;AN=52;BaseQRankSum=4.594;DP=238;FS=3.181;HRun=0;HaplotypeScore=78.3875;InbreedingCoeff=0.7286;MQ=62.07;MQ0=2;MQRankSum=-1.134;QD=16.00;ReadPosRankSum=-0.482;VQSLOD=3.3494;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:4:9.01:0,9,102	1/1:3,1:4:12.02:170,12,0	0/0:10,0:5:15.03:0,15,169	0/0:9,0:5:0.50:0,0,3	0/0:17,0:17:45.15:0,45,588	0/0:10,0:10:24.08:0,24,315	0/0:2,0:2:3.01:0,3,39	0/0:31,0:31:75.15:0,75,906	0/0:4,0:4:9.03:0,9,118	0/0:18,0:18:45.15:0,45,588	0/0:18,0:18:35.85:0,36,443	1/1:4,0:4:11.99:100,12,0	1/1:2,4:6:5.99:49,6,0	0/0:5,0:5:8.76:0,9,91	1/1:7,3:10:21:220,21,0	0/0:11,0:11:30.10:0,30,388	0/0:8,0:8:9.03:0,9,117	0/0:4,0:4:8.99:0,9,98	0/0:3,0:3:2.84:0,3,39	0/0:6,0:6:15.05:0,15,197	./.	1/1:1,0:1:3.01:47,3,0	1/1:3,3:6:5.99:67,6,0	./.	0/0:13,0:13:26.76:0,27,325	0/0:23,0:23:66.20:0,66,837	0/0:3,0:3:8.86:0,9,92	0/0:7,0:7:15.05:0,15,197
chr10	49359650	.	A	AT	1950.40	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=10.671;DP=297;FS=1.262;HRun=6;HaplotypeScore=51.8375;InbreedingCoeff=0.9096;MQ=82.10;MQ0=0;MQRankSum=-8.311;QD=30.01;ReadPosRankSum=0.028;VQSLOD=4.0495;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:30.07:0,30,306	1/1:1,5:6:18.02:208,18,0	0/0:9,0:9:24.05:0,24,245	0/0:13,0:13:33.04:0,33,327	0/0:26,0:26:69.15:0,69,703	0/0:12,0:12:36.06:0,36,360	0/0:8,0:8:21.04:0,21,214	0/0:20,0:20:51.09:0,51,509	0/0:9,0:9:27.06:0,27,275	0/0:13,0:13:39.09:0,39,398	0/0:15,0:15:45.10:0,45,459	1/1:3,6:9:21.02:246,21,0	1/1:0,8:8:24.08:302,24,0	0/0:11,0:11:30.02:0,30,294	1/1:1,15:16:45.08:544,45,0	0/0:11,0:11:33.06:0,33,329	0/0:4,0:4:6.01:0,6,61	0/0:3,0:3:3.01:0,3,31	0/0:7,0:7:21.05:0,21,214	0/0:11,0:11:33.08:0,33,337	0/0:1,0:1:3.01:0,3,31	1/1:0,9:9:27.09:334,27,0	1/1:2,9:11:27.04:322,27,0	1/1:0,6:6:15.05:189,15,0	0/0:11,0:11:27.06:0,27,275	0/0:21,0:21:60.06:0,60,590	0/0:11,0:11:33.07:0,33,336	0/0:5,0:5:15.03:0,15,153
chr10	49359700	.	TATTG	T	3151.34	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=11.367;DP=347;FS=2.708;HRun=0;HaplotypeScore=64.4196;InbreedingCoeff=0.9556;MQ=76.37;MQ0=0;MQRankSum=-6.322;QD=45.67;ReadPosRankSum=2.442;VQSLOD=4.1685;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:42.14:0,42,1133	1/1:0,5:5:15.05:285,15,0	0/0:12,0:12:36.12:0,36,814	0/0:7,0:7:15.70:0,16,354	0/0:26,0:25:69.21:0,69,1711	0/0:12,0:12:36.12:0,36,928	0/0:10,0:10:30.10:0,30,790	0/0:27,0:27:75.26:0,75,1984	0/0:11,0:11:33.11:0,33,870	0/0:11,0:11:33.11:0,33,838	0/0:18,0:18:51.18:0,51,1346	1/1:0,6:6:15.05:285,15,0	1/1:0,8:8:24.08:455,24,0	0/0:14,0:14:39.13:0,39,988	1/1:1,13:14:39.13:698,39,0	0/0:14,0:14:42.14:0,42,1113	0/0:4,0:4:12.04:0,12,323	0/0:5,0:5:15.05:0,15,404	0/0:18,0:18:54.19:0,54,1409	0/0:17,0:17:51.17:0,51,1314	0/0:4,0:4:12.04:0,12,324	1/1:2,9:11:33.11:600,33,0	1/1:0,16:16:39.13:740,39,0	1/1:2,7:9:15.05:285,15,0	0/0:18,0:18:51.18:0,51,1374	0/0:19,0:19:54.19:0,54,1456	0/0:13,0:13:33.11:0,33,890	0/0:2,0:2:6.02:0,6,162
chr10	49360192	.	AT	A	3702.48	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=12.578;DP=618;FS=3.281;HRun=7;HaplotypeScore=58.3018;InbreedingCoeff=0.9934;MQ=81.33;MQ0=0;MQRankSum=-2.322;QD=26.83;ReadPosRankSum=2.839;VQSLOD=4.5167;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:60.15:0,60,736	1/1:0,8:8:24.05:245,24,0	0/0:19,0:19:51.14:0,51,612	0/0:17,0:17:22.82:0,23,484	0/0:38,0:38:99:0,105,1264	0/0:23,0:23:69.22:0,69,868	0/0:13,0:13:39.12:0,39,490	0/0:32,0:32:96.31:0,96,1208	0/0:13,0:13:36.12:0,36,453	0/0:29,0:29:81.25:0,81,999	0/0:28,0:28:81.26:0,81,1019	1/1:3,25:28:69.15:704,69,0	1/1:0,17:17:48.11:490,48,0	0/0:24,0:24:66.19:0,66,805	1/1:3,22:25:66.15:673,66,0	0/0:23,0:23:60.19:0,60,755	0/0:17,0:17:51.14:0,51,625	0/0:22,0:22:54.15:0,54,658	0/0:13,0:13:36.12:0,36,453	0/0:38,0:37:99:0,105,1295	0/0:5,0:5:12.04:0,12,151	1/1:1,21:22:48.10:489,48,0	1/1:1,21:22:63.14:643,63,0	1/1:0,16:16:45.10:459,45,0	0/0:24,0:24:69.21:0,69,856	0/0:31,0:31:90.27:0,90,1118	0/0:35,0:35:99:0,99,1228	0/0:11,0:11:33.10:0,33,407
chr10	49360447	.	G	GA	3690.68	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-1.449;DP=518;FS=0.000;HRun=1;HaplotypeScore=82.4275;InbreedingCoeff=0.9945;MQ=83.65;MQ0=2;MQRankSum=-5.715;QD=35.15;ReadPosRankSum=0.515;VQSLOD=3.5466;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:45.15:0,45,583	1/1:0,6:6:17.98:242,18,0	0/0:39,0:29:75.17:0,75,889	0/0:23,0:19:54.11:0,54,651	0/0:21,0:21:57.19:0,57,739	0/0:19,0:19:51.15:0,51,648	0/0:19,0:19:51.12:0,51,629	0/0:22,0:22:63.19:0,63,795	0/0:15,0:15:45.13:0,45,569	0/0:21,0:21:63.20:0,63,807	0/0:14,0:14:39.13:0,39,506	1/1:1,19:20:54.18:801,54,0	1/1:1,10:11:33.11:493,33,0	0/0:18,0:18:51.17:0,51,662	1/1:2,19:21:57.08:780,57,0	0/0:10,0:10:27.07:0,27,336	0/0:35,0:35:90.29:0,90,1167	0/0:17,0:17:51.04:0,51,607	0/0:21,0:21:60.13:0,60,734	0/0:14,0:14:42.07:0,42,522	0/0:13,0:13:18.06:0,18,234	1/1:2,11:14:33.11:495,33,0	1/1:2,11:13:23.95:359,24,0	1/1:2,18:20:36.51:521,37,0	0/0:8,0:8:24.03:0,24,268	0/0:28,0:28:81.22:0,81,1021	0/0:31,0:31:69.19:0,69,860	0/0:6,0:6:18.06:0,18,234
chr10	49362164	.	CA	C	5457.60	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=13.533;DP=652;FS=0.712;HRun=3;HaplotypeScore=106.5278;InbreedingCoeff=0.9970;MQ=75.83;MQ0=0;MQRankSum=-1.329;QD=33.48;ReadPosRankSum=4.288;VQSLOD=4.6479;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:89.16:0,89,1231	1/1:1,10:11:30.09:371,30,0	0/0:16,0:16:39.12:0,39,543	0/0:14,0:14:40.34:0,40,511	0/0:27,0:27:78.26:0,78,1122	0/0:36,0:36:99:0,105,1512	0/0:17,0:17:48.15:0,48,674	0/0:44,0:44:99:0,117,1621	0/0:16,0:16:48.14:0,48,655	0/0:30,0:30:87.28:0,87,1223	0/0:14,0:14:42.14:0,42,604	1/1:0,18:18:51.16:632,51,0	1/1:1,24:25:63.20:781,63,0	0/0:21,0:21:63.20:0,63,886	1/1:2,33:35:96.30:1190,96,0	0/0:18,0:18:54.18:0,54,776	0/0:35,0:35:99:0,99,1385	0/0:22,0:22:63.21:0,63,907	0/0:15,0:15:42.13:0,42,588	0/0:33,0:33:96.31:0,96,1361	0/0:23,0:23:69.20:0,69,957	1/1:1,26:27:75.23:922,75,0	1/1:0,26:26:69.08:855,69,0	1/1:1,20:21:57.18:706,57,0	0/0:23,0:23:69.23:0,69,993	0/0:24,0:24:69.22:0,69,977	0/0:23,0:23:69.21:0,69,959	0/0:6,0:6:15.05:0,15,216
chr10	49362981	.	CT	C	480.77	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=7.195;DP=515;FS=4.118;HRun=1;HaplotypeScore=53.2493;InbreedingCoeff=0.8722;MQ=78.95;MQ0=0;MQRankSum=-1.318;QD=8.59;ReadPosRankSum=-2.290;VQSLOD=0.2332;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,114,1535	1/1:0,4:4:3.01:41,3,0	0/0:14,0:13:36.01:0,36,443	0/0:14,0:14:24.97:0,25,390	0/0:25,0:25:69.18:0,69,911	0/0:20,0:20:60.19:0,60,819	0/0:32,0:32:96.22:0,96,1205	0/0:20,0:20:57.12:0,57,667	0/0:15,0:15:42.12:0,42,569	0/0:18,0:18:54.16:0,54,714	0/0:11,0:11:33.09:0,33,433	1/1:0,14:14:4.21:77,4,0	1/1:11,2:13:23.74:209,24,0	0/0:26,0:26:74.94:0,75,962	1/1:0,10:10:8.98:87,9,0	0/0:25,0:25:72.19:0,72,952	0/0:35,0:35:99:0,102,1371	0/0:19,0:19:57.16:0,57,775	0/0:20,0:20:48.10:0,48,624	0/0:21,0:21:57.14:0,57,759	0/0:31,0:31:86.81:0,87,1144	1/1:5,0:5:12:122,12,0	1/1:0,3:3:2.22:7,2,0	1/1:0,7:7:9.02:106,9,0	0/0:19,0:19:51.13:0,51,679	0/0:23,0:23:63.20:0,63,866	0/0:27,0:27:81.22:0,81,1073	0/0:6,0:6:18.06:0,18,248
chr10	49363872	.	G	GT	7732.77	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=0.421;DP=735;FS=1.782;HRun=11;HaplotypeScore=110.2272;InbreedingCoeff=0.9735;MQ=68.66;MQ0=1;MQRankSum=-0.099;QD=16.92;ReadPosRankSum=1.677;VQSLOD=4.9127;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:32:64.27:0,64,572	1/1:10,0:10:26.34:160,26,0	0/0:27,0:22:16.16:0,16,178	0/0:21,0:18:21.47:0,21,184	1/1:13,31:44:6.61:692,7,0	0/0:22,0:22:39.85:0,40,359	0/0:25,1:26:44.24:0,44,522	1/1:12,21:33:23.44:538,23,0	0/0:20,0:20:47.60:0,48,361	1/1:3,25:29:74.84:695,75,0	1/1:6,24:30:69.02:676,69,0	1/1:25,0:25:43.15:241,43,0	1/1:35,0:35:87.02:492,87,0	1/1:6,17:24:24.18:379,24,0	1/1:34,0:34:74.78:411,75,0	0/0:27,0:27:65.69:0,66,506	1/1:4,23:27:60.12:609,60,0	1/1:4,17:21:42.03:415,42,0	0/0:15,1:16:8.30:0,8,237	0/0:39,2:41:55.49:0,55,779	0/0:15,0:17:43.70:0,44,319	1/1:37,0:37:99:580,100,0	1/1:23,0:23:61.29:364,61,0	1/1:18,0:18:37.90:214,38,0	1/1:8,18:27:41.92:410,42,0	1/1:6,23:30:34.09:613,34,0	0/0:28,1:29:47.15:0,47,534	1/1:1,8:9:24.05:244,24,0
chr10	49363876	.	T	TG	6126.64	PASS	AB=1.000;AC=22;AF=0.393;AN=56;BaseQRankSum=16.494;DP=736;FS=0.000;HRun=0;HaplotypeScore=113.3353;InbreedingCoeff=0.4058;MQ=68.16;MQ0=1;MQRankSum=-2.005;QD=15.63;ReadPosRankSum=8.911;VQSLOD=5.6406;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:95.66:0,96,1206	1/1:0,10:10:30.03:380,30,0	0/0:26,0:21:46.88:0,47,488	0/0:20,0:17:47.76:0,48,526	0/1:44,0:44:10.28:10,0,368	0/0:23,0:23:65.75:0,66,810	0/0:26,0:26:73.66:0,74,1026	0/0:35,0:35:2.97:0,3,279	0/0:20,0:20:60.15:0,60,758	0/1:33,0:33:6.86:7,0,146	0/1:30,0:30:23.01:23,0,93	1/1:0,24:24:45.15:603,45,0	1/1:2,33:35:90.28:1192,90,0	0/1:23,0:23:10.05:10,0,113	1/1:0,33:33:78.26:1044,78,0	0/0:26,0:26:78.22:0,78,1025	0/1:27,0:27:34.22:37,0,34	0/1:21,0:21:28.98:29,0,40	0/0:17,0:17:47.14:0,47,607	0/0:42,0:42:99:0,116,1612	0/0:16,0:16:48.11:0,48,620	1/1:1,38:40:99:1418,113,0	1/1:1,21:22:63.20:833,63,0	1/1:1,17:18:22.21:510,22,0	0/1:23,0:23:13.42:13,0,101	0/0:32,0:31:9.04:0,9,228	0/0:29,0:29:82.02:0,82,1112	0/1:9,0:9:10.24:16,0,10
chr10	49365227	.	GC	G	7624.81	PASS	AC=28;AF=0.519;AN=54;BaseQRankSum=-0.034;DP=656;FS=2.281;HRun=10;HaplotypeScore=119.9784;InbreedingCoeff=0.9972;MQ=73.42;MQ0=13;MQRankSum=0.841;QD=20.83;ReadPosRankSum=4.722;VQSLOD=4.0967;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:38:81.01:0,81,849	0/0:11,0:11:25.04:0,25,150	0/0:26,0:25:38.98:0,39,419	0/0:17,0:17:16.66:0,17,281	1/1:1,13:13:38.99:338,39,0	0/0:11,0:11:20.49:0,20,260	0/0:29,0:29:76.07:0,76,820	1/1:9,20:26:55.07:459,55,0	0/0:19,1:20:24.97:0,25,458	1/1:3,17:20:48.30:405,48,0	1/1:5,14:19:41.86:354,42,0	0/0:25,0:25:52.15:0,52,327	0/0:22,0:22:39.96:0,40,246	1/1:4,23:25:62.99:547,63,0	0/0:21,0:21:54.93:0,55,319	1/1:0,21:20:56.89:485,57,0	1/1:9,41:49:99:1028,121,0	1/1:3,23:23:65.99:573,66,0	1/1:7,18:22:53.09:413,53,0	1/1:1,14:14:41.99:364,42,0	1/1:2,39:41:99:963,111,0	0/0:17,0:19:40.33:0,40,255	0/0:18,0:18:37.61:0,38,258	0/0:31,0:31:83.64:0,84,518	1/1:2,23:24:65.99:572,66,0	1/1:2,19:22:56.02:474,56,0	1/1:4,26:30:74.98:650,75,0	./.
chr10	49365931	.	GA	G	878.80	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-1.076;DP=754;FS=4.880;HRun=2;HaplotypeScore=104.7807;InbreedingCoeff=0.9908;MQ=80.33;MQ0=0;MQRankSum=-1.980;QD=32.55;ReadPosRankSum=0.751;VQSLOD=3.2583;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:96.29:0,96,1395	0/0:6,0:6:18.02:0,18,245	0/0:27,0:28:76.16:0,76,1133	0/0:27,0:27:65.31:0,65,1136	0/0:38,0:38:99:0,105,1573	0/0:29,0:29:87.27:0,87,1262	0/0:26,0:26:78.24:0,78,1129	0/0:32,0:32:90.28:0,90,1295	0/0:30,0:30:87.27:0,87,1282	0/0:31,0:31:90.30:0,90,1349	0/0:25,0:25:72.24:0,72,1076	0/0:29,0:29:81.26:0,81,1187	0/0:33,0:33:96.32:0,96,1418	0/0:24,0:24:72.24:0,72,1079	0/0:32,0:32:96.31:0,96,1390	1/1:1,26:27:75.24:974,75,0	0/0:32,0:32:93.30:0,93,1364	0/0:21,0:21:60.20:0,60,892	0/0:25,0:25:75.23:0,75,1070	0/0:36,0:36:99:0,105,1550	0/0:30,0:30:87.29:0,87,1304	0/0:30,0:30:90.29:0,90,1328	0/0:21,0:21:63.20:0,63,920	0/0:13,0:13:33.11:0,33,495	0/0:33,0:33:96.31:0,96,1403	0/0:29,0:29:87.29:0,87,1304	0/0:24,0:24:72.24:0,72,1066	0/0:9,0:9:27.09:0,27,404
chr10	49366549	.	AG	A	7395.37	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=18.763;DP=668;FS=5.631;HRun=5;HaplotypeScore=107.7782;InbreedingCoeff=0.9726;MQ=96.69;MQ0=0;MQRankSum=-3.734;QD=30.31;ReadPosRankSum=3.306;VQSLOD=4.7172;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,141,1872	0/0:5,0:5:15.05:0,15,205	0/0:40,0:40:99:0,105,1369	0/0:32,0:32:81.23:0,81,1064	1/1:2,32:34:93.21:1038,93,0	0/0:31,0:31:87.26:0,87,1158	0/0:26,0:26:72.24:0,72,983	1/1:2,29:31:84.22:943,84,0	0/0:22,0:22:60.20:0,60,821	1/1:0,31:31:84.23:945,84,0	1/1:1,19:20:54.02:597,54,0	0/0:23,0:23:63.20:0,63,846	0/0:18,0:18:51.16:0,51,682	1/1:0,19:19:51.15:578,51,0	0/0:20,0:20:60.17:0,60,786	1/1:1,25:26:72.21:817,72,0	1/1:1,20:21:54.15:613,54,0	1/1:2,15:17:45.09:497,45,0	0/0:23,0:23:66.22:0,66,902	0/0:21,0:21:60.20:0,60,819	0/0:24,0:24:72.21:0,72,952	0/0:14,0:14:33.01:0,33,408	0/0:21,0:21:54.14:0,54,717	0/0:32,0:32:93.28:0,93,1241	1/1:0,19:19:51.15:577,51,0	1/1:1,24:25:69.16:757,69,0	0/0:22,0:22:66.22:0,66,901	1/1:0,1:1:3.01:34,3,0
chr10	49367093	.	T	TTTTGTTTG	8314.94	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-5.313;DP=656;FS=12.513;HRun=0;HaplotypeScore=158.1616;InbreedingCoeff=0.9622;MQ=63.24;MQ0=1;MQRankSum=-9.737;QD=37.97;ReadPosRankSum=-3.366;VQSLOD=2.8660;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:52.51:0,53,1285	0/0:12,0:12:24.08:0,24,497	0/0:33,0:29:26.03:0,26,528	0/0:25,0:19:18.06:0,18,379	1/1:7,5:20:18.06:661,18,0	0/0:30,0:30:60.15:0,60,1433	0/0:21,0:21:39.13:0,39,984	1/1:32,0:43:33.58:1057,34,0	0/0:20,0:20:42.13:0,42,982	1/1:5,9:20:39.05:1254,39,0	1/1:8,5:16:12.04:498,12,0	0/0:25,0:25:63.16:0,63,1423	0/0:26,0:26:51.17:0,51,1038	1/1:4,10:16:24.08:996,24,0	0/0:28,0:28:69.21:0,69,1646	1/1:16,1:36:33.58:1153,34,0	1/1:11,0:18:9.03:316,9,0	1/1:9,0:11:10.58:170,11,0	0/0:23,0:22:33.11:0,33,808	0/0:26,0:26:60.21:0,60,1461	0/0:21,0:21:48.16:0,48,1175	0/0:28,0:28:60.21:0,60,1490	0/0:29,0:29:51.14:0,51,1204	0/0:18,0:18:48.16:0,48,1225	1/1:5,8:16:21.07:872,21,0	1/1:4,8:15:33.11:1087,33,0	0/0:44,0:44:99:0,108,2553	1/1:3,5:8:6.02:249,6,0
chr10	49368827	.	A	AT	4333.66	PASS	AB=0.600;AC=19;AF=0.339;AN=56;BaseQRankSum=-0.327;DP=443;FS=9.566;HRun=1;HaplotypeScore=126.7939;InbreedingCoeff=0.9112;MQ=70.10;MQ0=4;MQRankSum=-1.079;QD=34.39;ReadPosRankSum=-0.912;VQSLOD=3.1380;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:57.19:0,57,739	0/0:13,0:13:29.68:0,30,388	0/0:27,0:14:36.12:0,36,467	0/0:29,0:16:33.28:0,33,314	1/1:2,11:13:28.34:407,28,0	0/0:27,0:27:57.16:0,57,722	0/0:16,0:16:36.10:0,36,452	1/1:0,27:27:78.26:1163,78,0	0/0:15,0:15:33.11:0,33,427	1/1:3,13:16:29.70:529,30,0	1/1:3,8:11:20.45:240,20,0	0/0:16,0:16:35.70:0,36,466	0/0:16,0:16:42.14:0,42,545	1/1:1,12:13:27.09:404,27,0	0/0:22,0:21:48.16:0,48,636	0/0:10,0:10:17.91:0,18,233	1/1:0,6:6:9.03:135,9,0	1/1:1,9:10:29.46:413,29,0	0/0:11,0:11:31.33:0,31,379	0/0:13,0:12:33.11:0,33,430	0/0:11,0:10:15.03:0,15,180	0/0:18,0:17:45.11:0,45,572	0/0:10,0:10:15.04:0,15,180	0/0:16,0:16:24.08:0,24,312	1/1:0,4:4:12.04:180,12,0	1/1:3,14:17:48.16:704,48,0	0/0:26,0:26:71.44:0,71,898	0/1:3,6:9:7.43:160,0,7
chr10	49368834	.	TACACACACACACACAA	T	2906.22	PASS	AB=1.000;AC=20;AF=0.357;AN=56;BaseQRankSum=6.513;DP=411;FS=8.129;HRun=0;HaplotypeScore=188.8988;InbreedingCoeff=0.7643;MQ=64.54;MQ0=8;MQRankSum=-2.167;QD=21.53;ReadPosRankSum=1.566;VQSLOD=1.8672;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:56.94:0,57,2714	0/0:12,0:12:23.98:0,24,605	0/1:29,0:12:0.95:1,0,195	0/0:27,0:12:8.17:0,8,269	1/1:10,2:11:12.01:317,12,0	0/0:21,0:21:45.02:0,45,2492	0/0:17,0:17:45.09:0,45,2446	1/1:25,0:24:29.95:257,30,0	0/0:13,0:13:27.01:0,27,1289	1/1:12,0:12:13.95:147,14,0	1/1:7,2:9:6.02:181,6,0	0/0:15,0:15:30.04:0,30,1009	0/0:15,0:15:29.99:0,30,519	1/1:6,3:10:21.02:598,21,0	0/0:19,0:18:36.02:0,36,1171	0/0:8,0:8:5.57:0,6,93	1/1:5,0:5:2.96:19,3,0	0/1:9,0:9:33.62:80,0,34	0/0:10,0:10:12.43:0,12,279	0/0:12,0:11:24.06:0,24,408	0/0:11,0:10:13.85:0,14,257	0/0:15,0:14:30.02:0,30,1077	0/0:11,0:11:12.04:0,12,525	0/0:17,0:18:10.30:0,10,584	1/1:2,1:3:9.01:208,9,0	1/1:9,4:14:33:891,33,0	0/0:26,0:26:50.77:0,51,927	1/1:4,3:7:10.86:404,11,0
chr10	49368848	.	CAA	C	1022.39	PASS	AB=0.993;AC=28;AF=0.500;AN=56;BaseQRankSum=6.169;DP=353;FS=7.191;HRun=3;HaplotypeScore=91.2996;InbreedingCoeff=0.4851;MQ=51.91;MQ0=15;MQRankSum=-2.276;QD=5.74;ReadPosRankSum=-0.052;VQSLOD=-0.3858;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:19.77:0,20,658	0/1:9,0:9:13.82:14,0,81	0/1:21,0:5:24.13:34,0,24	0/1:21,0:6:12.35:12,0,38	1/1:8,0:7:11.84:81,12,0	0/0:19,0:19:50.45:0,50,646	0/0:22,0:22:60.49:0,60,825	1/1:9,5:13:29.95:257,30,0	0/0:14,0:14:34.16:0,34,411	1/1:4,1:4:11.90:87,12,0	1/1:4,1:5:5.92:41,6,0	0/0:14,0:14:12.85:0,13,202	0/0:15,0:15:29.70:0,30,242	1/1:8,0:8:20.67:138,21,0	0/1:17,0:14:9.79:10,0,156	1/1:9,0:8:5.98:47,6,0	1/1:3,0:3:2.96:19,3,0	1/1:6,1:7:17.75:118,18,0	0/0:10,0:9:4.28:0,4,95	0/1:13,0:11:2.80:3,0,146	0/0:14,0:12:12.06:0,12,87	0/0:14,0:13:29.43:0,29,162	0/0:9,0:9:5.24:0,5,22	0/1:19,0:19:25.62:26,0,67	1/1:3,0:3:8.91:66,9,0	1/1:10,1:11:32.41:218,32,0	0/0:21,0:21:34.51:0,35,199	1/1:4,0:3:8.79:51,9,0
chr10	49368850	.	AACAC	A	2024.37	PASS	AB=0.828;AC=31;AF=0.596;AN=52;BaseQRankSum=5.878;DP=376;FS=21.771;HRun=0;HaplotypeScore=104.3902;InbreedingCoeff=0.2740;MQ=50.77;MQ0=16;MQRankSum=-2.893;QD=8.54;ReadPosRankSum=4.670;VQSLOD=0.9827;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:24:3.12:3,0,713	1/1:8,1:10:18.04:235,18,0	./.	0/0:22,0:6:3.90:0,4,42	1/1:9,0:8:5.63:53,6,0	0/0:18,0:18:33.11:0,33,673	0/0:21,0:21:50.91:0,51,956	0/0:23,0:22:32.71:0,33,235	0/0:13,0:13:21.07:0,21,503	0/0:7,0:5:3:0,3,28	1/1:6,0:6:3:27,3,0	0/1:10,4:14:37.43:40,0,37	1/1:10,3:13:3.01:49,3,0	0/1:13,0:13:8.89:85,0,9	1/1:16,1:15:25.85:332,26,0	1/1:9,0:8:2.99:25,3,0	./.	0/0:9,0:9:5.93:0,6,40	0/1:7,0:9:14.80:92,0,15	0/1:10,0:10:19.75:82,0,20	1/1:7,0:12:3:29,3,0	0/1:11,4:14:5.37:311,0,5	1/1:1,9:9:12.04:193,12,0	0/1:8,10:18:14.99:62,0,15	1/1:4,0:4:3:27,3,0	1/1:14,0:14:14.84:153,15,0	1/1:13,0:20:13.41:320,13,0	1/1:4,0:3:8.99:76,9,0
chr10	49368894	.	TAG	T	608.59	PASS	AB=0.953;AC=26;AF=0.765;AN=34;BaseQRankSum=0.820;DP=390;FS=15.198;HRun=0;HaplotypeScore=106.1251;InbreedingCoeff=0.2325;MQ=45.16;MQ0=22;MQRankSum=1.382;QD=2.54;ReadPosRankSum=1.425;VQSLOD=1.2960;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:20,6:25:27.85:28,0,34	./.	./.	./.	0/1:13,0:12:0.25:0,0,0	1/1:19,1:20:9.47:84,9,0	1/1:15,3:18:3:32,3,0	./.	1/1:15,0:13:8.85:74,9,0	1/1:12,0:11:11.36:56,11,0	./.	1/1:9,0:9:8.85:77,9,0	./.	0/1:17,0:17:0:1,0,0	1/1:13,1:13:17.39:150,17,0	1/1:8,0:14:0.41:1,0,0	0/0:14,0:12:0:0,0,0	./.	1/1:16,0:16:7.01:56,7,0	1/1:17,0:15:2.96:20,3,0	./.	./.	./.	1/1:13,1:14:3:28,3,0	./.	0/1:18,0:18:14.07:19,0,14	1/1:15,0:15:9:83,9,0	0/0:10,0:8:6.02:0,6,74
chr10	49368913	.	AGAGAGAGAGAGAGAG	A	737.70	PASS	AB=0.908;AC=11;AF=0.196;AN=56;BaseQRankSum=5.930;DP=392;FS=0.739;HRun=0;HaplotypeScore=156.3941;InbreedingCoeff=0.0926;MQ=43.24;MQ0=27;MQRankSum=-4.960;QD=6.05;ReadPosRankSum=-2.224;VQSLOD=2.4489;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:23:24.29:0,24,1241	0/0:10,0:9:21.03:0,21,924	0/0:6,0:1:3.01:0,3,74	0/0:14,0:2:6.02:0,6,110	1/1:12,2:13:8.73:57,9,0	0/0:24,0:23:42.14:0,42,1438	0/0:11,0:11:17.64:0,18,516	0/0:25,0:22:18.92:0,19,283	0/0:13,0:11:21.03:0,21,902	0/1:14,4:17:99:445,0,178	1/1:4,1:5:2.90:16,3,0	0/0:11,0:11:18.06:0,18,836	0/0:12,0:12:23.87:0,24,1108	0/1:15,3:18:99:101,0,128	0/0:15,0:13:33.07:0,33,1523	0/1:17,0:16:17.53:18,0,29	0/1:14,0:12:5.17:5,0,252	0/0:8,0:7:20.48:0,20,196	0/0:14,0:13:39.13:0,39,1600	0/0:21,0:19:30.10:0,30,1417	0/0:10,0:9:6.02:0,6,323	0/0:15,0:14:24.08:0,24,1061	0/0:7,0:6:9.03:0,9,274	0/0:14,0:14:21.07:0,21,1032	0/1:5,1:6:23.33:23,0,36	0/1:17,2:19:99:187,0,686	0/0:16,0:16:34.31:0,34,1369	0/1:10,1:8:29.75:30,0,569
chr10	49370542	.	T	TG	439.79	PASS	AB=0.588;AC=1;AF=0.018;AN=56;BaseQRankSum=7.697;DP=817;FS=0.000;HRun=0;HaplotypeScore=84.2187;InbreedingCoeff=0.2528;MQ=69.47;MQ0=0;MQRankSum=-2.125;QD=14.66;ReadPosRankSum=3.572;VQSLOD=4.8988;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:96.24:0,96,1262	0/0:14,0:14:42.10:0,42,543	0/0:22,0:22:59.58:0,60,767	0/0:19,0:18:51.16:0,51,682	0/0:27,0:27:78.23:0,78,1039	0/0:42,0:42:99:0,126,1727	0/0:26,0:26:78.19:0,78,1004	0/0:33,0:33:96.29:0,96,1293	0/0:24,0:24:72.21:0,72,959	0/0:37,0:37:99:0,105,1443	0/0:19,0:19:57.18:0,57,768	0/0:38,0:38:99:0,114,1559	0/0:25,0:25:75.24:0,75,1033	0/0:29,0:29:87.26:0,87,1170	0/0:41,0:41:99:0,120,1631	0/1:9,21:30:7.37:514,0,7	0/0:27,0:27:81.26:0,81,1115	0/0:27,0:27:78.21:0,78,1032	0/0:24,0:24:69.19:0,69,912	0/0:36,0:36:99:0,105,1436	0/0:32,0:32:93.29:0,93,1267	0/0:25,0:25:75.25:0,75,1047	0/0:31,0:31:87.28:0,87,1196	0/0:28,0:28:84.27:0,84,1157	0/0:31,0:31:93.25:0,93,1194	0/0:32,0:32:96.32:0,96,1329	0/0:40,0:40:99:0,111,1523	0/0:25,0:25:75.25:0,75,1048
chr10	49370543	.	T	TTG	683.80	PASS	AB=0.580;AC=1;AF=0.018;AN=56;BaseQRankSum=7.194;DP=812;FS=0.000;HRun=0;HaplotypeScore=100.4271;InbreedingCoeff=-0.0142;MQ=70.04;MQ0=0;MQRankSum=-0.905;QD=23.58;ReadPosRankSum=3.187;VQSLOD=4.0606;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:90.28:0,90,1313	0/0:14,0:14:42.11:0,42,577	0/0:24,0:24:59.84:0,60,779	0/0:19,0:18:54.16:0,54,734	0/0:27,0:27:81.24:0,81,1140	0/0:42,0:42:99:0,126,1849	0/0:25,0:25:69.20:0,69,998	0/0:32,0:32:90.30:0,90,1339	0/0:24,0:24:66.21:0,66,961	0/0:38,0:38:99:0,111,1587	0/0:19,0:19:54.17:0,54,788	0/0:37,0:37:99:0,111,1661	0/0:25,0:25:75.24:0,75,1114	0/0:30,0:30:87.27:0,87,1242	0/0:40,0:40:99:0,117,1737	0/1:8,21:29:27.04:758,0,27	0/0:28,0:28:81.26:0,81,1207	0/0:27,0:27:78.23:0,78,1118	0/0:21,0:21:60.18:0,60,875	0/0:36,0:36:99:0,104,1521	0/0:31,0:31:93.28:0,93,1344	0/0:26,0:26:75.25:0,75,1107	0/0:31,0:31:93.28:0,93,1341	0/0:28,0:28:84.27:0,84,1239	0/0:30,0:30:84.25:0,84,1197	0/0:32,0:32:93.31:0,93,1405	0/0:40,0:40:99:0,120,1717	0/0:25,0:25:75.25:0,75,1074
chr10	49371359	.	AAC	A	746.36	PASS	AB=0.908;AC=10;AF=0.263;AN=38;BaseQRankSum=-4.514;DP=1061;FS=21.561;HRun=0;HaplotypeScore=63.4100;InbreedingCoeff=0.0837;MQ=15.92;MQ0=563;MQRankSum=-2.093;QD=2.65;ReadPosRankSum=3.767;VQSLOD=-0.5378;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:16,1:9:27.83:28,0,261	0/0:16,1:3:3.01:0,3,61	./.	./.	0/1:110,3:27:73.55:74,0,288	0/0:32,0:8:12.04:0,12,243	./.	0/0:64,0:2:6.02:0,6,122	0/0:39,0:13:24.08:0,24,487	0/0:92,2:29:26.36:0,26,1165	0/0:83,0:14:18.02:0,18,240	0/1:11,5:5:8.95:134,0,9	0/1:24,4:7:48.72:134,0,49	0/0:59,1:15:30.10:0,30,497	1/1:23,3:5:3.01:49,3,0	0/0:81,0:31:51.17:0,51,959	./.	0/0:14,0:6:9.03:0,9,159	./.	./.	./.	0/1:39,2:16:75.29:75,0,283	./.	./.	0/0:63,0:8:18.06:0,18,294	0/0:69,1:22:54.18:0,54,981	1/1:16,9:12:21.07:342,21,0	0/1:15,1:6:39.84:40,0,88
chr10	49371392	.	A	AAC	42	PASS	AB=0.652;AC=1;AF=0.031;AN=32;BaseQRankSum=-0.908;DP=549;FS=0.000;HRun=0;HaplotypeScore=31.1990;InbreedingCoeff=0.0137;MQ=13.77;MQ0=281;MQRankSum=0.278;QD=2.80;ReadPosRankSum=-1.130;VQSLOD=1.1924;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:4:6.02:0,6,86	0/0:15,0:4:0:0,0,0	./.	./.	0/0:20,1:7:4.07:0,4,94	0/0:26,2:4:3.01:0,3,49	./.	./.	0/0:30,1:6:6.02:0,6,98	0/0:21,4:2:3.01:0,3,49	./.	0/0:31,1:15:24.08:0,24,391	0/0:30,2:16:21.07:0,21,341	./.	0/0:37,2:17:30.10:0,30,488	0/1:7,8:7:39.81:113,0,40	./.	./.	./.	0/0:30,0:9:6.02:0,6,96	./.	0/0:37,0:7:6.02:0,6,98	0/0:30,0:8:6.02:0,6,98	./.	./.	0/0:23,3:5:9.03:0,9,147	0/0:35,0:17:24.08:0,24,391	0/0:2,0:1:3.01:0,3,49
chr10	49371714	.	A	AGC	512.69	PASS	AB=0.954;AC=7;AF=0.146;AN=48;BaseQRankSum=0.868;DP=1168;FS=28.803;HRun=0;HaplotypeScore=54.9027;InbreedingCoeff=0.1114;MQ=20.64;MQ0=529;MQRankSum=-2.531;QD=2.77;ReadPosRankSum=2.003;VQSLOD=0.0377;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:13:9.03:0,9,147	0/0:20,0:9:3.01:0,3,49	./.	./.	0/1:38,1:8:51.50:52,0,83	0/0:63,0:33:18.06:0,18,276	0/0:56,0:14:6.02:0,6,88	./.	0/0:69,0:36:33.11:0,33,524	0/1:28,2:11:94.64:95,0,315	0/1:42,0:16:98.15:98,0,219	0/0:76,0:47:11.94:0,12,184	0/0:77,0:27:8.91:0,9,147	0/1:23,1:9:42.85:55,0,43	0/0:115,0:39:15.05:0,15,244	1/1:12,10:15:15.05:304,15,0	0/0:15,0:4:6.02:0,6,98	./.	0/0:37,0:7:21.04:0,21,315	0/0:53,0:30:48.16:0,48,769	0/0:93,0:35:51.14:0,51,804	0/0:55,0:27:30.10:0,30,472	0/0:32,0:21:17.93:0,18,282	0/0:49,0:20:9.03:0,9,146	0/0:44,0:23:15.97:0,16,430	0/1:24,1:10:36.74:37,0,307	0/0:45,0:26:15:0,15,210	0/0:9,0:3:0:0,0,0
chr10	49371778	.	A	AGC	2520.41	PASS	AB=0.921;AC=17;AF=0.370;AN=46;BaseQRankSum=4.798;DP=904;FS=78.658;HRun=0;HaplotypeScore=42.5621;InbreedingCoeff=0.7281;MQ=23.80;MQ0=346;MQRankSum=-2.639;QD=16.05;ReadPosRankSum=0.913;VQSLOD=0.6000;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:20:9.03:0,9,147	0/0:28,0:9:3.01:0,3,49	./.	./.	1/1:3,2:7:12.04:185,12,0	0/0:62,0:48:36.12:0,36,585	0/0:57,0:7:3.01:0,3,49	1/1:18,9:9:27.05:507,27,0	0/0:52,0:33:18.06:0,18,292	1/1:1,5:6:18.06:317,18,0	1/1:2,4:9:9.03:162,9,0	0/0:76,0:56:60.18:0,60,951	0/0:60,0:33:32.63:0,33,537	1/1:5,8:15:24.08:426,24,0	0/0:101,0:65:69.09:0,69,1124	1/1:0,7:7:12.04:243,12,0	./.	./.	0/0:21,0:4:12.04:0,12,196	0/0:28,0:14:3.01:0,3,47	0/1:53,0:15:81.92:110,0,82	0/0:50,0:24:9.02:0,9,123	0/0:44,0:18:3.01:0,3,49	0/0:43,0:21:12.04:0,12,195	1/1:1,5:5:12.04:223,12,0	1/1:3,9:10:27.09:525,27,0	0/0:41,0:34:38.76:0,39,635	./.
chr10	49371842	.	A	AAC	806.71	PASS	AB=0.873;AC=15;AF=0.278;AN=54;BaseQRankSum=3.399;DP=751;FS=7.204;HRun=0;HaplotypeScore=44.1095;InbreedingCoeff=0.2870;MQ=51.12;MQ0=155;MQRankSum=-5.751;QD=5.27;ReadPosRankSum=1.988;VQSLOD=0.9643;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:30:27.09:0,27,434	0/0:14,0:7:6.02:0,6,86	0/0:23,0:12:26.88:0,27,425	0/0:31,0:7:18.06:0,18,280	0/1:20,1:18:45.64:46,0,178	0/0:44,0:37:42.14:0,42,673	0/0:41,0:22:36.12:0,36,585	1/1:24,0:1:3.01:40,3,0	0/0:45,0:40:42.14:0,42,683	0/1:24,2:13:99:124,0,351	0/0:20,0:14:6.02:0,6,98	0/0:65,0:56:57.19:0,57,916	0/0:40,0:28:47.94:0,48,748	0/1:14,1:11:51.68:52,0,89	0/0:73,0:56:72.24:0,72,1173	0/1:7,4:11:33.82:192,0,34	1/1:4,1:6:3.01:61,3,0	0/0:7,0:3:2.98:0,3,49	1/1:8,4:2:3.01:61,3,0	./.	0/0:15,1:3:6.02:0,6,86	0/0:41,0:30:9.03:0,9,147	0/0:32,1:23:21.03:0,21,311	0/0:43,0:33:15.05:0,15,233	0/0:19,0:17:6.02:0,6,87	0/1:14,1:8:83.62:84,0,178	1/1:2,12:10:12.04:243,12,0	1/1:1,1:1:3.01:61,3,0
chr10	49371906	.	A	AAC	3974.43	PASS	AB=0.630;AC=19;AF=0.352;AN=54;BaseQRankSum=10.955;DP=706;FS=11.649;HRun=0;HaplotypeScore=59.6406;InbreedingCoeff=0.8529;MQ=43.34;MQ0=79;MQRankSum=-7.147;QD=26.15;ReadPosRankSum=-1.739;VQSLOD=3.1438;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,1:23:30.10:0,30,489	0/0:19,1:15:24.08:0,24,388	0/0:3,0:3:6.02:0,6,70	0/0:1,0:1:3.01:0,3,48	1/1:6,12:23:27.09:452,27,0	0/0:50,2:50:63.18:0,63,970	0/0:29,0:14:36.12:0,36,558	1/1:8,0:13:30.04:360,30,0	0/0:45,1:41:48.15:0,48,757	0/1:7,7:13:39.95:495,0,40	1/1:3,1:11:15.05:241,15,0	0/0:60,4:56:63.11:0,63,1013	0/0:25,4:17:24.06:0,24,365	1/1:4,9:10:12.02:244,12,0	0/0:60,8:50:63.20:0,63,1002	1/1:4,10:13:27.09:548,27,0	1/1:1,5:6:12.04:226,12,0	1/1:2,3:4:9.03:181,9,0	0/0:19,0:7:21.05:0,21,309	0/0:32,0:24:54.17:0,54,835	0/0:23,0:19:33.11:0,33,536	0/0:46,1:42:24.07:0,24,366	0/0:39,0:37:54.18:0,54,868	0/0:30,0:26:24.08:0,24,390	1/1:1,7:16:30.10:512,30,0	1/1:3,10:13:39.12:718,39,0	0/0:27,0:19:33.11:0,33,536	./.
chr10	49373283	.	T	TTG	138.71	PASS	AB=0.975;AC=5;AF=0.119;AN=42;BaseQRankSum=4.714;DP=2220;FS=1.761;HRun=0;HaplotypeScore=67.2677;InbreedingCoeff=0.1030;MQ=18.64;MQ0=1073;MQRankSum=-2.868;QD=0.63;ReadPosRankSum=-2.768;VQSLOD=1.1506;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:177,0:76:33.11:0,33,495	0/0:42,0:16:9.03:0,9,138	./.	./.	0/0:17,0:2:6.02:0,6,92	0/0:200,1:81:39.13:0,39,595	0/0:141,0:16:9.03:0,9,138	./.	0/0:234,0:101:66.12:0,66,1003	0/0:28,0:6:15.05:0,15,230	./.	0/1:88,1:28:38.55:39,0,211	0/0:136,0:43:23.95:0,24,367	0/1:26,1:6:46.61:47,0,83	0/0:148,0:48:32.97:0,33,503	1/1:37,1:7:3.01:56,3,0	0/0:13,0:6:3.01:0,3,46	./.	0/0:85,0:21:60.20:0,60,919	0/0:140,0:46:24.04:0,24,341	0/0:205,0:83:27.09:0,27,411	0/0:77,0:19:3.01:0,3,46	0/1:64,2:16:28.22:103,0,28	0/0:57,0:24:12.04:0,12,175	./.	0/0:72,0:40:33.72:0,34,510	0/0:135,0:56:35.86:0,36,545	./.
chr10	49373285	.	A	AGC	1000.60	PASS	AB=0.942;AC=8;AF=0.190;AN=42;BaseQRankSum=6.055;DP=2321;FS=4.975;HRun=0;HaplotypeScore=68.5118;InbreedingCoeff=-0.0309;MQ=18.87;MQ0=1089;MQRankSum=-4.696;QD=1.85;ReadPosRankSum=-3.667;VQSLOD=0.2151;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:178,0:77:33.11:0,33,526	0/0:42,0:17:9.03:0,9,146	./.	./.	0/0:24,0:4:6.02:0,6,98	0/0:199,0:83:41.75:0,42,669	0/0:143,0:17:9.03:0,9,146	./.	0/0:236,0:103:48.85:0,49,1043	0/0:41,0:12:18.06:0,18,286	./.	0/1:93,0:30:18.58:19,0,226	0/0:136,0:43:23.95:0,24,391	0/1:40,0:14:65.62:66,0,86	0/1:149,0:50:2.54:3,0,498	1/1:52,0:13:3.01:38,3,0	0/0:24,0:11:3.01:0,3,49	./.	0/0:83,0:21:63.22:0,63,1026	0/0:136,0:49:24.08:0,24,390	0/0:200,0:85:42.14:0,42,619	0/0:82,0:22:3.01:0,3,49	0/1:62,0:16:30.30:68,0,30	0/1:58,0:25:2.17:2,0,171	./.	0/1:43,32:49:99:918,0,512	0/0:132,0:57:35.86:0,36,576	./.
chr10	49374173	.	A	AAG	2189.83	PASS	AB=1.000;AC=20;AF=0.385;AN=52;BaseQRankSum=1.369;DP=418;FS=4.571;HRun=0;HaplotypeScore=82.9463;InbreedingCoeff=0.6022;MQ=60.47;MQ0=4;MQRankSum=0.124;QD=12.66;ReadPosRankSum=-0.377;VQSLOD=3.1859;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:54.10:0,54,633	1/1:13,0:13:21.07:297,21,0	0/1:10,0:5:4.36:19,0,4	0/0:23,0:7:2.96:0,3,19	./.	0/0:8,0:8:21.02:0,21,241	0/0:21,0:21:38.93:0,39,457	1/1:21,0:21:4.55:51,5,0	0/0:14,0:14:27.05:0,27,319	1/1:22,0:21:0.64:25,1,0	./.	1/1:17,0:17:33.11:481,33,0	1/1:2,11:13:3.01:49,3,0	0/0:15,0:14:1.25:0,1,3	0/1:16,0:16:1.28:447,0,1	0/0:13,0:13:0.94:0,1,2	0/0:13,0:13:1.31:0,1,3	0/0:7,0:6:1.36:0,1,3	0/0:10,0:9:18.06:0,18,221	0/0:21,0:21:33.06:0,33,389	0/0:13,0:13:11.99:0,12,148	1/1:7,9:16:13.77:153,14,0	1/1:15,0:15:24.08:349,24,0	1/1:18,1:19:33.11:478,33,0	1/1:11,0:11:0.47:1,0,0	0/0:15,0:15:0.47:0,0,1	0/0:12,0:12:21.02:0,21,241	0/0:12,0:11:0.94:0,1,2
chr10	49374475	.	A	AT	8471.52	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=17.257;DP=666;FS=4.177;HRun=2;HaplotypeScore=109.2782;InbreedingCoeff=0.9976;MQ=83.36;MQ0=0;MQRankSum=-2.448;QD=34.72;ReadPosRankSum=3.055;VQSLOD=4.8100;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,123,1507	0/0:7,0:7:21.07:0,21,260	0/0:27,0:27:62.56:0,63,662	0/0:20,0:20:50.97:0,51,576	1/1:2,20:22:33.11:471,33,0	0/0:16,0:16:45.14:0,45,550	0/0:22,0:22:60.17:0,60,730	1/1:4,22:25:63.17:877,63,0	0/0:24,0:24:72.23:0,72,892	1/1:3,21:23:60.20:863,60,0	1/1:3,10:13:18.06:258,18,0	0/0:27,0:27:81.25:0,81,1003	0/0:37,0:37:99:0,108,1338	1/1:2,31:34:96.32:1364,96,0	0/0:37,0:37:99:0,105,1279	1/1:1,24:25:66.22:949,66,0	1/1:0,20:20:54.18:777,54,0	1/1:0,13:13:36.12:518,36,0	0/0:26,0:26:69.21:0,69,841	0/0:18,0:18:42.13:0,42,512	0/0:25,0:25:72.21:0,72,878	0/0:22,0:22:63.18:0,63,757	0/0:16,0:16:33.10:0,33,408	0/0:22,0:22:66.19:0,66,804	1/1:0,31:31:84.28:1207,84,0	1/1:3,24:25:63.18:885,63,0	0/0:25,0:24:75.23:0,75,924	1/1:1,7:8:21.07:302,21,0
chr10	49376050	.	T	TC	10884.35	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=15.616;DP=701;FS=4.764;HRun=1;HaplotypeScore=106.7702;InbreedingCoeff=0.9991;MQ=84.63;MQ0=0;MQRankSum=-0.837;QD=42.68;ReadPosRankSum=1.291;VQSLOD=4.4264;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,147,2016	0/0:8,0:8:24.08:0,24,335	0/0:23,0:23:53.09:0,53,600	0/0:22,0:22:56.99:0,57,657	1/1:1,17:18:51.17:762,51,0	0/0:14,0:14:42.14:0,42,587	0/0:25,0:25:72.23:0,72,990	1/1:0,24:24:69.20:1008,69,0	0/0:27,0:27:78.26:0,78,1084	1/1:0,27:27:81.24:1204,81,0	1/1:0,18:18:54.18:805,54,0	0/0:22,0:22:66.22:0,66,921	0/0:29,0:29:87.29:0,87,1217	1/1:0,27:27:72.24:1093,72,0	0/0:29,0:29:87.29:0,87,1217	1/1:0,27:27:78.26:1176,78,0	1/1:1,34:35:99:1509,99,0	1/1:0,19:19:51.17:771,51,0	0/0:30,0:30:87.28:0,87,1199	0/0:23,0:23:69.22:0,69,949	0/0:29,0:29:87.28:0,87,1200	0/0:29,0:29:84.28:0,84,1172	0/0:16,0:16:48.15:0,48,656	0/0:34,0:34:99:0,99,1341	1/1:0,21:22:57.19:853,57,0	1/1:0,31:31:93.28:1386,93,0	0/0:36,0:36:99:0,108,1458	1/1:0,7:7:21.07:317,21,0
chr10	49377813	.	G	GTAGCGATGTCACAGCTC	30077.76	PASS	AB=0.818;AC=21;AF=0.375;AN=56;BaseQRankSum=5.293;DP=644;FS=5.576;HRun=0;HaplotypeScore=300.6376;InbreedingCoeff=0.9164;MQ=77.70;MQ0=0;MQRankSum=-16.941;QD=127.99;ReadPosRankSum=1.712;VQSLOD=4.1149;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:87.28:0,87,3820	0/0:8,0:8:24.08:0,24,1175	0/0:12,0:12:30.10:0,30,1177	0/0:23,0:23:59.88:0,60,2412	1/1:17,5:23:13.83:1213,14,0	0/0:13,0:13:36.12:0,36,1762	0/0:26,0:26:72.23:0,72,3155	1/1:29,0:29:69.23:3916,69,0	0/0:20,0:20:60.19:0,60,2461	1/1:23,7:33:72.25:5023,72,0	1/1:13,3:20:15.05:1236,15,0	0/0:30,0:30:87.30:0,87,4120	0/0:25,0:25:69.24:0,69,3258	1/1:11,8:20:36.12:2899,36,0	0/0:36,0:36:99:0,102,4706	0/1:21,5:27:99:3326,0,239	1/1:11,4:15:21.07:1581,21,0	1/1:7,3:11:24.08:1803,24,0	0/0:20,0:20:57.18:0,57,2243	0/0:28,0:28:75.24:0,75,3459	0/0:31,0:31:90.31:0,90,4175	0/0:26,0:26:69.24:0,69,3103	0/0:23,0:23:66.20:0,66,2925	0/0:29,0:29:81.28:0,81,3868	1/1:12,7:19:30.10:2405,30,0	1/1:20,7:29:72.25:5190,72,0	0/0:26,0:26:72.25:0,72,3355	1/1:8,1:9:21.07:1486,21,0
chr10	49378012	.	AGGAAAAGACCTTCTGATTCAG	A	17344.16	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=15.881;DP=581;FS=22.848;HRun=0;HaplotypeScore=334.3039;InbreedingCoeff=0.9769;MQ=98.83;MQ0=0;MQRankSum=-14.549;QD=125.68;ReadPosRankSum=4.184;VQSLOD=3.1578;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,144,12046	0/0:10,0:10:30.10:0,30,2739	0/0:36,0:36:99:0,105,5255	0/0:39,0:38:99:0,106,6157	1/1:0,26:26:48.59:2477,49,0	0/0:13,0:13:39.13:0,39,3421	0/0:20,0:20:60.21:0,60,5204	1/1:0,12:12:36.12:1386,36,0	0/0:17,0:17:51.18:0,51,4302	1/1:0,21:21:63.22:3350,63,0	1/1:0,10:10:21.07:1193,21,0	0/0:30,0:30:90.31:0,90,7283	0/0:19,0:19:57.20:0,57,5246	1/1:0,13:13:30.10:1816,30,0	0/0:27,0:27:78.27:0,78,6986	1/1:0,9:9:9.03:545,9,0	1/1:0,9:9:18.06:1090,18,0	1/1:0,5:5:12.04:671,12,0	0/0:15,0:15:45.13:0,45,3230	0/0:27,0:27:81.27:0,81,7519	0/0:30,0:30:87.30:0,87,7855	0/0:28,0:28:84.29:0,84,6943	0/0:24,0:24:72.25:0,72,5872	0/0:24,0:24:72.25:0,72,6190	1/1:0,19:19:45.15:2725,45,0	1/1:0,11:11:33.09:1545,33,0	0/0:35,0:35:99:0,105,9758	1/1:0,3:3:9.03:545,9,0
chr10	49378255	.	GGGC	G	5454.10	PASS	AB=0.917;AC=23;AF=0.411;AN=56;BaseQRankSum=15.176;DP=429;FS=4.241;HRun=0;HaplotypeScore=136.4262;InbreedingCoeff=0.8894;MQ=66.66;MQ0=0;MQRankSum=-14.915;QD=31.53;ReadPosRankSum=4.781;VQSLOD=5.0213;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:73.44:0,73,1204	0/1:10,1:11:15.45:15,0,357	0/0:10,0:10:21.07:0,21,391	0/0:15,0:15:36.02:0,36,458	1/1:3,13:16:21.05:266,21,0	0/0:12,0:12:36.08:0,36,607	0/0:19,0:19:57.20:0,57,1150	1/1:3,14:17:42.07:587,42,0	0/0:10,0:10:30.09:0,30,558	1/1:0,10:10:27.09:391,27,0	1/1:1,9:10:9:133,9,0	0/0:11,0:11:23.93:0,24,390	0/0:12,0:12:24.04:0,24,379	1/1:0,22:22:60.20:879,60,0	0/0:15,0:15:32.98:0,33,585	1/1:0,26:27:73.18:1057,73,0	1/1:1,14:15:36.12:506,36,0	1/1:2,15:17:39.60:598,40,0	0/0:21,0:21:63.10:0,63,875	0/0:14,0:14:42.13:0,42,684	0/0:16,0:16:45.05:0,45,550	0/0:14,0:14:30.03:0,30,456	0/0:7,0:7:18.06:0,18,340	0/0:20,0:20:56:0,56,934	1/1:1,5:6:15.49:201,15,0	1/1:1,20:21:57.05:775,57,0	0/0:31,0:30:87.18:0,87,1250	1/1:0,1:1:3.01:45,3,0
chr10	49378261	.	TGGG	T	3955.62	PASS	AB=0.889;AC=23;AF=0.411;AN=56;BaseQRankSum=13.904;DP=436;FS=6.851;HRun=10;HaplotypeScore=145.1091;InbreedingCoeff=0.9081;MQ=63.54;MQ0=0;MQRankSum=-14.082;QD=21.38;ReadPosRankSum=1.941;VQSLOD=1.0288;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:26:48.52:0,49,798	0/1:3,1:8:17.29:17,0,172	0/0:9,0:11:27.06:0,27,404	0/0:13,0:13:24.03:0,24,337	1/1:2,13:15:22.04:193,22,0	0/0:10,0:10:21.05:0,21,397	0/0:18,0:20:54.09:0,54,958	1/1:10,10:20:47.36:476,47,0	0/0:9,0:9:27.09:0,27,547	1/1:3,7:10:21.06:251,21,0	1/1:4,6:10:11.38:110,11,0	0/0:7,0:10:21.52:0,22,274	0/0:5,0:12:14.93:0,15,167	1/1:4,19:23:56.80:628,57,0	0/0:4,0:17:28.49:0,28,396	1/1:9,23:32:84.32:830,84,0	1/1:7,9:16:23.99:265,24,0	1/1:5,12:17:38.97:436,39,0	0/0:10,0:19:35.87:0,36,279	0/0:3,0:13:38.83:0,39,306	0/0:6,0:16:30.66:0,31,222	0/0:8,0:14:12.50:0,13,158	0/0:5,0:8:18.05:0,18,257	0/0:15,0:22:44.51:0,45,688	1/1:3,5:8:17.38:163,17,0	1/1:7,14:21:42.04:484,42,0	0/0:10,0:30:80.74:0,81,638	1/1:4,1:5:14.55:102,15,0
chr10	49378271	.	G	GT	2785.18	PASS	AB=1.000;AC=28;AF=0.500;AN=56;BaseQRankSum=11.820;DP=446;FS=18.840;HRun=1;HaplotypeScore=128.0938;InbreedingCoeff=0.6227;MQ=63.00;MQ0=0;MQRankSum=-11.105;QD=10.59;ReadPosRankSum=2.710;VQSLOD=0.5445;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:59.49:0,59,608	0/1:7,0:7:20.58:21,0,27	0/0:11,0:11:23.06:0,23,230	0/0:11,0:11:21.33:0,21,164	1/1:19,0:19:27.32:154,27,0	0/0:11,0:11:29.22:0,29,295	0/0:23,0:23:53.97:0,54,612	1/1:21,2:22:67.05:483,67,0	0/0:11,0:11:32.84:0,33,345	1/1:10,0:10:23.81:118,24,0	1/1:10,1:11:13.76:125,14,0	0/0:12,0:12:9.68:0,10,103	0/1:12,0:12:1.87:2,0,60	1/1:23,0:23:64.01:360,64,0	0/1:20,0:20:6.58:7,0,132	1/1:25,5:30:84.74:544,85,0	1/1:15,1:16:37.34:218,37,0	1/1:13,1:14:40.51:243,41,0	0/0:14,0:17:43.01:0,43,268	0/0:12,0:14:34.89:0,35,200	0/0:14,0:15:38.21:0,38,243	0/1:13,0:13:14.30:14,0,67	0/1:8,0:8:4.82:5,0,59	0/1:19,0:19:17.54:18,0,180	1/1:7,2:11:28.85:197,29,0	1/1:18,1:19:52.84:288,53,0	0/0:30,0:33:62.70:0,63,468	1/1:8,0:8:23.78:201,24,0
chr10	49378693	.	CG	C	4821.30	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=17.652;DP=599;FS=18.575;HRun=3;HaplotypeScore=125.3136;InbreedingCoeff=0.9742;MQ=93.58;MQ0=0;MQRankSum=-17.230;QD=30.13;ReadPosRankSum=3.829;VQSLOD=3.1283;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,123,1732	0/0:11,0:11:33.10:0,33,457	0/0:29,0:29:84:0,84,1142	0/0:29,0:29:71.51:0,72,958	1/1:2,16:18:30.09:348,30,0	0/0:19,0:19:57.18:0,57,801	0/0:26,0:26:75.22:0,75,1040	1/1:2,12:14:36.11:420,36,0	0/0:27,0:27:81.27:0,81,1165	1/1:0,17:17:51.15:594,51,0	1/1:0,21:21:45.13:524,45,0	0/0:28,0:28:81.26:0,81,1148	0/0:16,0:16:48.16:0,48,691	1/1:0,14:14:42.12:489,42,0	0/0:36,0:36:99:0,99,1424	1/1:0,13:13:39.12:454,39,0	1/1:1,15:16:42.12:489,42,0	1/1:1,7:8:21.06:245,21,0	0/0:21,0:21:60.20:0,60,860	0/0:18,0:18:51.15:0,51,714	0/0:36,0:36:99:0,99,1425	0/0:20,0:20:57.17:0,57,800	0/0:25,0:25:63.21:0,63,906	0/0:28,0:28:84.28:0,84,1209	1/1:0,21:21:54.16:629,54,0	1/1:0,17:17:51.15:594,51,0	0/0:27,0:27:75.25:0,75,1079	1/1:0,1:1:3.01:35,3,0
chr10	49378914	.	C	CCTCAACTGCATGG	33056.84	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-1.084;DP=720;FS=14.097;HRun=0;HaplotypeScore=269.9353;InbreedingCoeff=0.9872;MQ=85.60;MQ0=0;MQRankSum=-18.808;QD=139.48;ReadPosRankSum=2.849;VQSLOD=3.5475;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:57:99:0,153,6043	0/0:4,0:4:12.04:0,12,479	0/0:22,0:21:57.20:0,57,2033	0/0:37,0:37:99:0,108,3664	1/1:11,11:25:41.96:2279,42,0	0/0:21,0:21:57.20:0,57,2197	0/0:32,0:32:85.56:0,86,3148	1/1:23,1:25:69.24:3312,69,0	0/0:19,0:19:54.19:0,54,2080	1/1:15,12:29:87.30:4853,87,0	1/1:18,6:25:54.18:3446,54,0	0/0:30,0:30:90.31:0,90,3303	0/0:27,0:27:78.27:0,78,2952	1/1:7,7:16:45.15:2708,45,0	0/0:27,0:26:75.26:0,75,2928	1/1:11,11:25:66.11:3694,66,0	1/1:11,5:17:39.12:2121,39,0	1/1:6,7:16:29.97:1844,30,0	0/0:24,0:24:60.21:0,60,2177	0/0:33,0:33:93.29:0,93,3366	0/0:21,0:21:54.15:0,54,1959	0/0:47,0:47:99:0,132,4891	0/0:20,0:20:60.19:0,60,2005	0/0:28,0:28:81.28:0,81,3062	1/1:12,10:22:60.12:3341,60,0	1/1:18,9:34:90.31:4917,90,0	0/0:34,0:34:99:0,102,3966	1/1:1,2:3:9.03:543,9,0
chr10	49379390	.	TA	T	6189.15	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=14.305;DP=786;FS=1.387;HRun=4;HaplotypeScore=76.9162;InbreedingCoeff=0.9999;MQ=60.51;MQ0=1;MQRankSum=-1.415;QD=32.57;ReadPosRankSum=1.347;VQSLOD=5.4412;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:84.28:0,84,1171	1/1:1,13:14:39.12:468,39,0	0/0:18,0:18:42.11:0,42,552	0/0:15,0:15:35.48:0,35,459	0/0:40,0:39:99:0,117,1619	0/0:27,0:27:78.25:0,78,1073	0/0:24,0:24:72.21:0,72,987	0/0:27,0:27:75.24:0,75,1018	0/0:23,0:23:66.21:0,66,903	0/0:38,0:38:96.32:0,96,1331	0/0:16,0:16:45.15:0,45,626	1/1:2,20:22:60.18:720,60,0	1/1:1,29:30:81.13:971,81,0	0/0:26,0:26:75.25:0,75,1047	1/1:0,44:44:99:1548,129,0	0/0:37,0:37:99:0,108,1495	0/0:36,0:36:96.31:0,96,1321	0/0:22,0:22:63.21:0,63,882	0/0:23,0:22:60.20:0,60,840	0/0:32,0:32:81.26:0,81,1117	0/0:27,0:27:75.25:0,75,1050	1/1:3,34:37:99:1224,102,0	1/1:1,23:24:51:611,51,0	1/1:0,19:19:54.17:648,54,0	0/0:32,0:32:93.31:0,93,1302	0/0:40,0:40:99:0,117,1590	0/0:51,0:50:99:0,150,2082	0/0:11,0:11:30.10:0,30,420
chr10	49379776	.	C	CAGTGTGGCTGTTGG	41844.37	PASS	AB=0.673;AC=39;AF=0.696;AN=56;BaseQRankSum=-3.508;DP=655;FS=10.848;HRun=0;HaplotypeScore=196.6658;InbreedingCoeff=0.5751;MQ=60.54;MQ0=3;MQRankSum=-14.565;QD=83.86;ReadPosRankSum=4.240;VQSLOD=3.7185;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:31:90.12:0,90,3499	1/1:3,6:14:14.83:837,15,0	0/0:20,0:19:54.15:0,54,1870	0/0:16,0:15:32.08:0,32,1137	1/1:7,10:27:41.92:1786,42,0	0/0:19,0:19:56.89:0,57,1427	0/0:39,0:38:99:0,113,3208	1/1:23,0:18:42.07:1873,42,0	0/0:30,0:30:86.96:0,87,3139	1/1:8,12:25:72.18:3825,72,0	1/1:3,15:24:23.93:997,24,0	1/1:4,19:34:39.13:2579,39,0	1/1:7,13:25:48.12:2933,48,0	1/1:8,23:34:60.21:3919,60,0	1/1:6,23:35:52.38:3185,52,0	1/1:8,14:29:51.13:2919,51,0	1/1:6,9:20:20.68:1263,21,0	0/1:3,13:18:39.08:1350,0,39	0/1:10,0:14:61.39:872,0,61	0/1:11,0:21:6.65:2126,0,7	0/1:18,0:30:99:1814,0,143	1/1:3,11:20:21.07:1482,21,0	1/1:1,7:15:8.54:493,9,0	1/1:1,15:25:30.57:2014,31,0	1/1:2,7:11:21.07:1342,21,0	1/1:2,9:16:41.40:1384,41,0	0/1:17,0:31:29.57:2581,0,30	1/1:6,0:6:14.96:272,15,0
chr10	49380248	.	TA	T	12513.91	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=14.868;DP=665;FS=0.596;HRun=3;HaplotypeScore=68.7790;InbreedingCoeff=0.9997;MQ=90.81;MQ0=1;MQRankSum=-5.600;QD=34.19;ReadPosRankSum=-0.352;VQSLOD=5.0449;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:48.15:0,48,670	0/0:16,0:16:45.15:0,45,645	0/0:29,0:30:84.10:0,84,1207	0/0:31,0:30:49.57:0,50,930	1/1:2,22:24:57.11:687,57,0	0/0:33,0:33:96.32:0,96,1382	0/0:17,0:17:51.17:0,51,734	1/1:1,26:27:78.21:929,78,0	0/0:26,0:26:78.25:0,78,1104	1/1:1,34:34:99:1264,102,0	1/1:0,29:29:78.25:966,78,0	0/0:29,0:29:84.27:0,84,1191	0/0:24,0:24:69.23:0,69,991	1/1:1,33:34:90.28:1115,90,0	0/0:18,0:18:54.17:0,54,758	1/1:1,23:24:62.96:780,63,0	1/1:0,27:27:75.24:929,75,0	1/1:0,13:13:39.12:483,39,0	1/1:0,17:17:51.13:614,51,0	1/1:1,25:26:69.22:855,69,0	1/1:0,19:19:51.16:632,51,0	0/0:20,0:20:57.19:0,57,821	0/0:20,0:20:54.18:0,54,778	0/0:17,0:17:51.16:0,51,714	1/1:0,22:22:60.19:743,60,0	1/1:0,29:29:87.26:1066,87,0	1/1:1,31:32:93.29:1153,93,0	1/1:0,8:8:24.08:297,24,0
chr10	49380633	.	G	GC	5710.71	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-5.381;DP=600;FS=2.214;HRun=1;HaplotypeScore=75.9399;InbreedingCoeff=0.9918;MQ=88.78;MQ0=0;MQRankSum=-0.941;QD=38.85;ReadPosRankSum=2.925;VQSLOD=5.6420;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,114,1480	1/1:1,5:6:15.05:225,15,0	0/0:25,0:25:75.02:0,75,935	0/0:20,0:20:60.14:0,60,722	0/0:18,0:18:54.16:0,54,687	0/0:21,0:21:63.20:0,63,818	0/0:22,0:22:66.21:0,66,857	0/0:36,0:36:99:0,105,1351	0/0:26,0:26:72.23:0,72,933	0/0:18,0:18:54.18:0,54,701	0/0:15,0:15:42.14:0,42,545	1/1:0,28:28:72.24:1079,72,0	1/1:0,24:24:66.69:989,67,0	0/0:25,0:25:66.18:0,66,842	1/1:0,24:24:72.24:1079,72,0	1/1:3,27:30:72.24:1079,72,0	0/0:21,0:21:63.20:0,63,818	0/0:5,0:5:15.05:0,15,195	0/0:22,0:22:63.19:0,63,803	0/0:18,0:18:54.18:0,54,701	0/0:35,0:35:99:0,102,1323	1/1:2,12:14:27.09:405,27,0	1/1:0,5:5:15.05:225,15,0	1/1:2,14:16:42.14:630,42,0	0/0:19,0:19:57.10:0,57,718	0/0:18,0:18:51.16:0,51,649	0/0:34,0:34:99:0,99,1270	0/0:15,0:15:42.14:0,42,543
chr10	49380853	.	AG	A	988.79	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=4.819;DP=275;FS=1.475;HRun=1;HaplotypeScore=33.7208;InbreedingCoeff=0.8411;MQ=79.33;MQ0=0;MQRankSum=-0.938;QD=31.90;ReadPosRankSum=-1.434;VQSLOD=2.8801;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:7:21.07:0,21,315	1/1:0,5:5:15:187,15,0	0/0:9,0:8:14.35:0,14,271	0/0:10,0:7:12.34:0,12,216	0/0:5,0:5:15.05:0,15,230	0/0:16,0:16:48.16:0,48,734	0/0:1,0:1:3.01:0,3,46	0/0:54,0:54:99:0,162,2311	0/0:4,0:4:12.03:0,12,163	0/0:2,0:2:6.02:0,6,92	0/0:3,0:3:9.03:0,9,138	1/1:0,6:6:18.06:252,18,0	1/1:0,2:2:6.02:84,6,0	0/0:10,0:10:30.08:0,30,437	1/1:0,8:8:21.07:294,21,0	0/0:12,0:12:34.51:0,35,201	0/0:13,0:13:39.11:0,39,572	0/0:13,0:13:18.11:0,18,501	0/0:14,0:14:8.98:0,9,170	0/0:7,0:7:13.11:0,13,97	0/0:4,0:4:11.37:0,11,62	1/1:0,2:2:5.97:61,6,0	1/1:0,5:5:12.04:168,12,0	1/1:0,3:3:9.03:126,9,0	0/0:17,0:17:51.14:0,51,718	0/0:10,0:10:30.09:0,30,441	0/0:12,0:12:31.19:0,31,173	0/0:21,0:21:63.21:0,63,962
chr10	49380854	.	G	GA	1713.61	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-7.913;DP=274;FS=0.000;HRun=5;HaplotypeScore=31.8256;InbreedingCoeff=0.7516;MQ=79.58;MQ0=0;MQRankSum=-0.965;QD=33.60;ReadPosRankSum=-0.337;VQSLOD=3.0669;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:8:18.04:0,18,193	0/0:5,0:5:6.22:0,6,16	0/0:8,0:8:12.33:0,12,185	0/0:9,0:7:9.11:0,9,134	0/0:5,0:5:15.04:0,15,161	0/0:16,0:16:48.12:0,48,516	0/0:1,0:1:3.01:0,3,32	0/0:53,0:53:99:0,129,1387	0/0:4,0:4:9:0,9,88	0/0:2,0:2:6.02:0,6,65	0/0:3,0:3:9.02:0,9,97	0/0:6,0:6:9.33:0,9,24	0/0:2,0:2:3.11:0,3,8	0/0:10,0:10:27.07:0,27,290	0/0:8,0:8:10.22:0,10,26	1/1:1,11:12:33.11:434,33,0	0/0:13,0:13:36.09:0,36,387	0/0:13,0:13:36.09:0,36,385	1/1:0,15:15:45.14:577,45,0	1/1:0,7:7:21.07:276,21,0	1/1:1,4:5:12.04:158,12,0	0/0:2,0:2:1.55:0,2,4	0/0:5,0:5:6.20:0,6,16	0/0:3,0:3:4:0,4,10	0/0:16,0:16:45.10:0,45,476	0/0:10,0:10:27.07:0,27,290	1/1:0,12:12:33.11:434,33,0	0/0:21,0:21:63.16:0,63,677
chr10	49381234	.	TTAAAAG	T	2542.53	PASS	AC=20;AF=0.385;AN=52;BaseQRankSum=9.092;DP=279;FS=1.361;HRun=0;HaplotypeScore=76.8600;InbreedingCoeff=0.9006;MQ=87.46;MQ0=1;MQRankSum=-9.151;QD=39.12;ReadPosRankSum=-2.409;VQSLOD=3.1344;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:8:24.06:0,24,736	./.	0/0:11,0:10:21.07:0,21,600	0/0:13,0:12:15.05:0,15,466	0/0:14,0:14:42.13:0,42,1335	0/0:24,0:24:63.22:0,63,2172	0/0:11,0:11:27.09:0,27,850	0/0:39,0:39:93.30:0,93,2935	0/0:5,0:5:12.04:0,12,414	0/0:7,0:7:18.06:0,18,574	0/0:8,0:8:24.08:0,24,777	1/1:3,4:7:11.95:175,12,0	1/1:0,3:3:9.03:202,9,0	0/0:7,0:7:15.05:0,15,456	1/1:3,4:7:12:222,12,0	1/1:2,8:10:24:445,24,0	0/0:10,0:10:30.10:0,30,1029	0/0:19,0:19:54.17:0,54,1783	1/1:3,11:14:33.11:714,33,0	1/1:0,4:4:12.04:269,12,0	1/1:2,2:4:2.97:20,3,0	1/1:2,2:4:5.98:87,6,0	1/1:2,3:5:6.02:135,6,0	./.	0/0:10,0:10:24.08:0,24,828	0/0:15,0:15:42.14:0,42,1433	1/1:0,7:7:21.07:472,21,0	0/0:11,0:11:21.06:0,21,646
chr10	49381257	.	AAT	A	1342.17	PASS	AB=0.956;AC=21;AF=0.500;AN=42;BaseQRankSum=-1.565;DP=247;FS=10.133;HRun=0;HaplotypeScore=59.9219;InbreedingCoeff=0.3282;MQ=74.60;MQ0=2;MQRankSum=0.635;QD=9.26;ReadPosRankSum=-0.581;VQSLOD=1.5128;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:7:18.06:0,18,290	./.	./.	0/0:13,0:8:2.84:0,3,14	1/1:11,0:11:11.20:145,11,0	0/0:22,4:26:29.24:0,29,906	0/0:6,0:6:9.01:0,9,116	1/1:33,1:34:62.79:565,63,0	0/0:4,0:4:9.03:0,9,144	1/1:8,0:8:12.13:91,12,0	0/1:8,0:8:6.91:165,0,7	./.	1/1:4,0:4:7.84:31,8,0	1/1:5,0:5:9.03:110,9,0	0/1:4,0:4:17.21:18,0,17	0/0:7,0:7:6:0,6,62	1/1:12,1:13:2.49:24,2,0	1/1:18,1:19:3.56:126,4,0	0/1:11,1:12:12.91:13,0,246	0/1:5,1:6:27.83:28,0,83	./.	./.	./.	./.	1/1:7,0:7:9.08:68,9,0	0/1:14,0:14:28.37:112,0,28	0/0:8,0:8:8.93:0,9,85	0/0:9,0:9:4.23:0,4,12
chr10	49381290	.	AT	A	246.80	PASS	AC=10;AF=0.192;AN=52;BaseQRankSum=3.035;DP=219;FS=0.000;HRun=1;HaplotypeScore=54.4148;InbreedingCoeff=0.7406;MQ=79.40;MQ0=0;MQRankSum=-2.475;QD=13.71;ReadPosRankSum=0.058;VQSLOD=2.4589;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:30.08:0,30,440	./.	0/0:10,0:8:9.63:0,10,218	0/0:17,0:12:11.53:0,12,105	0/0:3,0:3:9.03:0,9,136	0/0:24,0:24:66.21:0,66,1023	0/0:7,0:7:21.07:0,21,328	0/0:27,0:27:78.18:0,78,995	0/0:5,0:5:15.05:0,15,232	0/0:5,0:5:15.03:0,15,194	0/0:8,0:8:24.04:0,24,267	1/1:0,2:2:3.01:41,3,0	1/1:1,5:4:12.04:161,12,0	0/0:5,0:5:12.02:0,12,131	1/1:3,3:5:6.90:63,7,0	0/0:6,0:6:11.98:0,12,139	0/0:12,0:12:33.10:0,33,467	0/0:13,0:13:39.12:0,39,584	0/0:12,0:12:36.12:0,36,542	0/0:3,0:3:9.03:0,9,134	0/0:1,0:1:3.01:0,3,41	./.	1/1:0,1:1:3.01:41,3,0	1/1:0,3:3:6.02:82,6,0	0/0:7,0:7:21.06:0,21,298	0/0:9,0:9:27.06:0,27,357	0/0:4,0:4:12.04:0,12,178	0/0:11,0:11:30.09:0,30,451
chr10	49381291	.	T	TA	263.61	PASS	AB=1.000;AC=11;AF=0.212;AN=52;BaseQRankSum=3.638;DP=220;FS=4.056;HRun=1;HaplotypeScore=56.5163;InbreedingCoeff=0.6622;MQ=79.65;MQ0=0;MQRankSum=-3.238;QD=9.09;ReadPosRankSum=-0.919;VQSLOD=0.7591;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:27.09:0,27,375	./.	0/1:11,0:9:0.04:0,0,210	0/0:15,0:11:5.31:0,5,92	0/0:3,0:3:9.03:0,9,111	0/0:24,0:24:63.21:0,63,874	0/0:7,0:7:21.07:0,21,291	0/0:27,0:27:58.08:0,58,619	0/0:5,0:5:15.05:0,15,209	0/0:5,0:5:8.83:0,9,89	0/0:8,0:8:12.63:0,13,132	1/1:2,0:2:3.01:41,3,0	1/1:5,1:4:12.03:130,12,0	0/0:5,0:5:5.91:0,6,31	1/1:3,3:5:9.02:110,9,0	0/0:5,0:5:11.40:0,11,123	0/0:13,0:13:27.74:0,28,289	0/0:14,0:14:35.60:0,36,402	0/0:12,0:12:36.05:0,36,441	0/0:3,0:3:9.03:0,9,125	0/0:1,0:1:3.01:0,3,41	./.	1/1:1,0:1:3.01:41,3,0	1/1:3,0:3:6.02:82,6,0	0/0:7,0:7:18.52:0,19,216	0/0:9,0:9:17.85:0,18,180	0/0:4,0:4:12.04:0,12,166	0/0:11,0:11:26.92:0,27,333
chr10	49381474	.	GA	G	4350.63	PASS	AB=1.000;AC=43;AF=0.796;AN=54;BaseQRankSum=5.586;DP=276;FS=4.511;HRun=10;HaplotypeScore=42.6548;InbreedingCoeff=0.7787;MQ=83.85;MQ0=0;MQRankSum=-2.739;QD=20.72;ReadPosRankSum=1.673;VQSLOD=5.6105;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:42.11:0,42,465	1/1:0,1:1:3:26,3,0	0/1:14,0:12:20.32:20,0,84	0/0:14,0:11:8.04:0,8,72	1/1:0,13:13:35.99:312,36,0	0/0:13,1:15:15.88:0,16,378	0/0:8,0:8:24.06:0,24,266	1/1:4,19:23:50.91:434,51,0	0/0:14,0:14:42.11:0,42,463	1/1:0,8:8:24:208,24,0	1/1:1,9:10:23.99:208,24,0	1/1:0,5:5:14.95:122,15,0	1/1:0,4:4:9:78,9,0	1/1:0,11:11:32.99:286,33,0	1/1:1,7:8:20.99:182,21,0	1/1:0,5:5:15:130,15,0	1/1:1,20:21:47.99:417,48,0	1/1:1,9:10:21:182,21,0	1/1:0,10:10:29.99:260,30,0	1/1:0,2:2:6:52,6,0	1/1:0,11:11:32.99:286,33,0	./.	1/1:0,4:4:8.99:78,9,0	1/1:1,7:8:18:156,18,0	1/1:0,10:10:29.99:260,30,0	1/1:4,8:12:23.97:208,24,0	1/1:0,8:8:21:182,21,0	1/1:0,12:12:29.99:260,30,0
chr10	49381746	.	G	GC	7884.97	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-1.614;DP=508;FS=1.132;HRun=2;HaplotypeScore=56.5097;InbreedingCoeff=0.9947;MQ=92.94;MQ0=0;MQRankSum=-7.095;QD=39.23;ReadPosRankSum=6.641;VQSLOD=4.4555;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:84.25:0,84,1027	1/1:1,5:6:15.05:216,15,0	0/0:25,0:25:62.76:0,63,729	0/0:23,0:23:66.04:0,66,750	0/0:19,0:19:51.14:0,51,614	0/0:22,0:22:66.16:0,66,773	0/0:10,0:10:27.08:0,27,335	0/0:26,0:26:69.20:0,69,834	0/0:23,0:23:69.22:0,69,855	0/0:20,0:20:57.18:0,57,706	0/0:18,0:18:54.16:0,54,654	1/1:0,17:17:48.16:691,48,0	1/1:0,20:20:60.20:862,60,0	0/0:17,0:17:51.16:0,51,632	1/1:0,17:17:48.16:691,48,0	1/1:1,15:16:36.12:518,36,0	0/0:9,0:9:27.08:0,27,335	0/0:20,0:20:57.18:0,57,705	1/1:4,32:36:96.32:1382,96,0	1/1:1,14:16:39.13:555,39,0	1/1:1,21:22:60.20:864,60,0	1/1:0,5:5:15.05:216,15,0	1/1:0,12:12:36.12:507,36,0	1/1:0,21:21:60.20:864,60,0	0/0:15,0:15:42.09:0,42,481	0/0:22,0:22:60.18:0,60,733	1/1:0,13:13:36.12:518,36,0	0/0:7,0:7:21.05:0,21,246
chr10	49381988	.	GA	G	11176.46	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=19.788;DP=702;FS=0.887;HRun=2;HaplotypeScore=94.0526;InbreedingCoeff=0.9956;MQ=88.80;MQ0=0;MQRankSum=-2.506;QD=36.52;ReadPosRankSum=5.015;VQSLOD=5.0054;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,126,1885	1/1:0,9:9:27.09:351,27,0	0/0:28,0:28:72.13:0,72,1037	0/0:26,0:26:72.18:0,72,1016	0/0:35,0:35:96.31:0,96,1403	0/0:23,0:23:69.22:0,69,1014	0/0:22,0:22:63.20:0,63,922	0/0:27,0:27:81.25:0,81,1160	0/0:28,0:28:81.27:0,81,1213	0/0:32,0:32:96.33:0,96,1439	0/0:15,0:15:45.14:0,45,654	1/1:0,23:23:63.20:818,63,0	1/1:0,26:26:75.24:974,75,0	0/0:26,0:26:78.26:0,78,1168	1/1:0,29:29:87.28:1129,87,0	1/1:1,25:26:72.23:935,72,0	0/0:22,0:22:66.21:0,66,968	0/0:18,0:18:51.17:0,51,762	1/1:0,29:29:87.25:1088,87,0	1/1:0,29:29:87.28:1130,87,0	1/1:0,41:41:99:1403,108,0	1/1:0,24:24:69.22:896,69,0	1/1:0,31:31:81.14:1052,81,0	1/1:0,19:19:48.16:623,48,0	0/0:23,0:23:66.22:0,66,989	0/0:25,0:25:75.25:0,75,1105	1/1:0,20:20:60.20:779,60,0	0/0:4,0:4:12.04:0,12,180
chr10	49382080	.	AGATTT	A	6109.62	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=14.280;DP=553;FS=5.195;HRun=0;HaplotypeScore=119.6211;InbreedingCoeff=0.9936;MQ=83.30;MQ0=0;MQRankSum=-14.260;QD=49.27;ReadPosRankSum=-0.067;VQSLOD=4.9093;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:96.33:0,96,2917	1/1:0,9:9:24.08:522,24,0	0/0:14,0:14:42.14:0,42,1278	0/0:23,0:23:66.23:0,66,1958	0/0:18,0:18:51.17:0,51,1648	0/0:15,0:15:45.15:0,45,1408	0/0:22,0:22:60.19:0,60,1861	0/0:21,0:21:63.22:0,63,1963	0/0:27,0:27:81.28:0,81,2527	0/0:21,0:21:63.21:0,63,1953	0/0:15,0:15:45.15:0,45,1357	1/1:8,19:26:57.18:1218,57,0	1/1:3,15:18:48.14:1021,48,0	0/0:26,0:26:72.22:0,72,2202	1/1:2,22:24:69.24:1497,69,0	0/0:24,0:24:72.23:0,72,2255	0/0:30,0:30:90.28:0,90,2778	0/0:16,0:16:48.16:0,48,1496	0/0:27,0:27:81.23:0,81,2440	0/0:16,0:16:48.16:0,48,1551	0/0:30,0:30:81.25:0,81,2466	1/1:1,11:12:30.10:659,30,0	1/1:2,9:11:27.09:585,27,0	1/1:2,21:23:30.06:608,30,0	0/0:12,0:12:33.10:0,33,947	0/0:16,0:16:45.15:0,45,1369	0/0:19,0:19:54.16:0,54,1660	0/0:4,0:4:12.04:0,12,340
chr10	49383292	.	ACTG	A	11934.15	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=9.730;DP=731;FS=7.046;HRun=0;HaplotypeScore=122.8575;InbreedingCoeff=0.9851;MQ=61.44;MQ0=1;MQRankSum=-1.124;QD=42.02;ReadPosRankSum=0.883;VQSLOD=6.3871;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,132,2923	0/0:17,0:17:48.16:0,48,1050	0/0:25,0:16:45.14:0,45,865	0/0:21,0:18:51.16:0,51,1059	1/1:2,25:27:54.18:867,54,0	0/0:31,0:31:93.31:0,93,2041	0/0:17,0:17:45.15:0,45,1020	1/1:1,22:23:63.20:1022,63,0	0/0:19,0:19:48.16:0,48,1065	1/1:1,49:50:99:2343,144,0	1/1:2,24:26:72.12:1117,72,0	0/0:25,1:26:28.69:0,29,1593	0/0:25,0:25:75.26:0,75,1698	1/1:0,24:24:66.23:1098,66,0	0/0:38,0:38:99:0,105,2379	1/1:0,18:18:51.17:850,51,0	1/1:3,23:26:21.32:1038,21,0	1/1:2,25:27:69.24:1148,69,0	0/0:28,0:27:75.22:0,75,1585	0/0:23,0:23:60.21:0,60,1340	0/0:22,0:22:66.21:0,66,1335	0/0:30,0:30:84.27:0,84,1820	0/0:22,0:22:61.49:0,61,1406	0/0:25,0:25:66.23:0,66,1455	1/1:1,29:30:66.18:1070,66,0	1/1:3,25:28:7.23:1131,7,0	0/0:29,0:29:87.30:0,87,1928	1/1:0,5:5:15.05:250,15,0
chr10	49384711	.	ATTTGATTAGAACT	A	15681.91	PASS	AB=0.537;AC=21;AF=0.375;AN=56;BaseQRankSum=16.904;DP=592;FS=0.748;HRun=0;HaplotypeScore=206.0248;InbreedingCoeff=0.8969;MQ=55.61;MQ0=2;MQRankSum=-14.286;QD=76.50;ReadPosRankSum=3.781;VQSLOD=4.5720;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:39.13:0,39,2408	0/0:5,0:5:12.04:0,12,782	0/0:22,0:10:26.92:0,27,1227	0/0:11,0:3:8.70:0,9,389	1/1:8,25:28:63.21:2338,63,0	0/0:28,0:28:78.25:0,78,4739	0/0:19,0:19:48.13:0,48,2492	1/1:6,16:17:36.09:1046,36,0	0/0:28,0:27:81.28:0,81,4974	1/1:1,15:16:45.13:1439,45,0	1/1:2,25:26:72.25:2737,72,0	0/0:33,0:33:93.30:0,93,5617	0/0:17,0:17:39.13:0,39,2363	1/1:5,12:15:30.10:1174,30,0	0/0:21,0:21:63.21:0,63,3814	0/1:3,19:21:99:1827,0,144	1/1:3,15:16:30.10:1174,30,0	1/1:3,5:5:12.04:470,12,0	0/0:23,0:19:48.16:0,48,2836	0/0:39,0:39:99:0,111,6835	0/0:19,0:19:45.15:0,45,2849	0/0:34,0:34:99:0,99,6150	0/0:25,0:25:66.23:0,66,4216	0/0:21,0:21:60.17:0,60,3334	1/1:3,20:22:54.19:2099,54,0	1/1:2,14:11:30.09:1025,30,0	0/0:28,0:28:84.26:0,84,5067	1/1:0,3:3:9.03:352,9,0
chr10	49384840	.	T	TA	2994.60	PASS	AB=0.885;AC=10;AF=0.179;AN=56;BaseQRankSum=-9.831;DP=643;FS=5.045;HRun=8;HaplotypeScore=61.3390;InbreedingCoeff=0.7816;MQ=62.46;MQ0=0;MQRankSum=-0.226;QD=20.80;ReadPosRankSum=0.936;VQSLOD=3.9155;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:66.03:0,66,604	0/0:7,0:7:17.99:0,18,160	0/1:14,3:13:37.53:38,0,138	0/0:8,2:6:14.99:0,15,132	0/0:35,0:35:90.01:0,90,812	0/0:36,0:36:90.05:0,90,824	0/0:17,1:18:34.16:0,34,442	0/0:42,1:43:67.36:0,67,843	0/0:21,0:21:60.03:0,60,549	0/0:28,0:28:68.99:0,69,631	0/0:29,0:29:75.03:0,75,686	0/0:21,1:22:30.19:0,30,510	0/0:17,0:17:36.01:0,36,329	0/0:22,0:22:63.03:0,63,577	0/0:30,1:31:75.03:0,75,686	0/1:21,2:23:0.14:0,0,507	0/0:19,0:19:48.02:0,48,439	0/0:10,0:9:24.01:0,24,219	1/1:3,17:20:51.13:577,51,0	1/1:6,37:43:99:1243,111,0	1/1:0,14:14:39.12:450,39,0	0/0:20,1:21:54.03:0,54,494	0/0:24,1:25:54.22:0,54,638	0/0:18,0:18:51.02:0,51,467	0/0:29,0:29:84.04:0,84,769	0/0:32,0:32:81.03:0,81,741	1/1:2,25:27:75.18:851,75,0	0/0:2,0:2:6:0,6,55
chr10	49386480	.	GA	G	9048.88	PASS	AB=0.746;AC=53;AF=0.946;AN=56;BaseQRankSum=2.731;DP=314;FS=18.948;HRun=3;HaplotypeScore=170.1503;InbreedingCoeff=-0.0619;MQ=61.66;MQ0=0;MQRankSum=-4.025;QD=28.82;ReadPosRankSum=2.964;VQSLOD=2.6888;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,6:7:18.06:223,18,0	1/1:1,4:5:12.04:148,12,0	0/1:4,2:6:56.06:56,0,111	0/1:7,1:8:27.54:28,0,67	1/1:0,9:9:21.07:259,21,0	1/1:0,10:10:24.07:297,24,0	1/1:2,9:11:18.05:223,18,0	1/1:3,15:18:48.14:582,48,0	1/1:2,15:17:45.14:556,45,0	1/1:1,9:10:27.08:333,27,0	1/1:0,7:7:18.06:222,18,0	1/1:3,9:12:24.07:297,24,0	1/1:1,11:12:33.09:394,33,0	1/1:2,14:16:36.11:445,36,0	1/1:3,10:13:30.09:371,30,0	1/1:0,13:13:33.10:408,33,0	1/1:3,10:13:24.07:294,24,0	1/1:0,9:9:27.08:334,27,0	0/1:2,4:6:4.91:167,0,5	1/1:3,12:15:39.07:452,39,0	1/1:3,6:9:15.03:173,15,0	1/1:2,9:11:27.08:334,27,0	1/1:3,11:14:33.09:395,33,0	1/1:0,6:6:6.02:74,6,0	1/1:1,15:16:42.13:519,42,0	1/1:0,17:17:51.12:614,51,0	1/1:1,21:22:63.20:775,63,0	1/1:0,2:2:6.02:74,6,0
chr10	49386488	.	T	TA	10429.53	PASS	AB=0.633;AC=52;AF=0.929;AN=56;BaseQRankSum=-3.819;DP=281;FS=31.533;HRun=1;HaplotypeScore=182.7660;InbreedingCoeff=0.3016;MQ=49.24;MQ0=0;MQRankSum=-1.899;QD=37.52;ReadPosRankSum=4.465;VQSLOD=1.5744;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,7:6:15.05:224,15,0	0/1:2,4:6:0.02:164,0,0	0/1:2,2:4:20.05:103,0,20	0/0:3,0:3:2.96:0,3,30	1/1:3,5:8:15.05:224,15,0	1/1:0,9:9:27.09:404,27,0	1/1:1,6:7:18.06:269,18,0	1/1:1,13:14:42.14:622,42,0	1/1:0,15:15:45.15:673,45,0	1/1:2,7:9:21.07:314,21,0	1/1:0,6:6:18.06:269,18,0	1/1:1,10:11:27.05:379,27,0	1/1:2,10:12:19.36:434,19,0	1/1:2,11:13:33.08:467,33,0	1/1:4,10:14:7.98:396,8,0	1/1:3,13:16:32.03:615,32,0	1/1:2,9:11:27.09:404,27,0	1/1:3,7:10:27.07:382,27,0	1/1:0,6:6:18.06:269,18,0	1/1:2,12:14:38.97:553,39,0	1/1:2,4:6:12.04:179,12,0	1/1:1,8:9:24.08:359,24,0	1/1:1,10:11:30.10:448,30,0	1/1:2,4:6:9.03:134,9,0	1/1:1,12:13:36.12:538,36,0	1/1:3,13:16:42.14:621,42,0	1/1:3,20:23:60.20:895,60,0	1/1:0,2:2:6.02:90,6,0
chr10	49386496	.	A	AG	9609.29	PASS	AB=0.750;AC=53;AF=0.946;AN=56;BaseQRankSum=2.046;DP=254;FS=56.763;HRun=1;HaplotypeScore=166.6867;InbreedingCoeff=0.3431;MQ=45.74;MQ0=0;MQRankSum=-2.925;QD=38.13;ReadPosRankSum=2.084;VQSLOD=-0.6648;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,6:5:15.05:223,15,0	1/1:1,6:7:18.06:256,18,0	0/1:2,1:3:14.02:36,0,14	0/0:2,0:2:2.96:0,3,30	1/1:0,5:5:15.05:223,15,0	1/1:1,9:10:27.09:402,27,0	1/1:0,8:8:24.08:346,24,0	1/1:4,9:13:31.35:450,31,0	1/1:2,14:16:48.11:688,48,0	1/1:1,4:6:12.04:179,12,0	1/1:0,6:6:18.06:268,18,0	1/1:0,10:10:30.10:438,30,0	1/1:2,6:8:18.06:262,18,0	1/1:3,7:10:25.86:337,26,0	1/1:2,12:14:36.12:519,36,0	1/1:1,15:16:45.15:655,45,0	1/1:2,8:10:4.61:287,5,0	1/1:1,6:7:21.05:292,21,0	1/1:1,5:6:15.05:224,15,0	1/1:0,13:13:39.13:571,39,0	1/1:0,4:4:9.03:126,9,0	1/1:3,7:10:21.07:298,21,0	1/1:0,9:9:27.09:402,27,0	1/1:0,6:6:12.04:172,12,0	1/1:3,10:13:33.07:467,33,0	1/1:1,13:14:42.03:597,42,0	1/1:0,17:18:54.18:800,54,0	1/1:2,2:4:6.49:91,6,0
chr10	49386515	.	GTT	G	5859.92	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=1.974;DP=183;FS=40.768;HRun=4;HaplotypeScore=121.4293;InbreedingCoeff=0.5063;MQ=43.41;MQ0=0;MQRankSum=-1.303;QD=32.56;ReadPosRankSum=2.491;VQSLOD=2.4055;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,0:3:9.03:109,9,0	1/1:6,0:6:18.06:232,18,0	0/0:2,0:2:6.02:0,6,80	0/0:1,0:1:0:0,0,0	1/1:2,0:2:6.02:76,6,0	1/1:9,1:10:27.09:346,27,0	1/1:7,0:7:21.07:267,21,0	1/1:4,0:4:12.04:154,12,0	1/1:10,0:10:24.08:307,24,0	1/1:4,0:4:6.02:80,6,0	1/1:5,0:5:12.04:152,12,0	1/1:6,0:6:12.04:149,12,0	1/1:3,0:4:12.04:154,12,0	1/1:8,0:8:21.07:266,21,0	1/1:10,1:11:33.11:424,33,0	1/1:11,1:12:30.10:390,30,0	1/1:6,0:6:13.90:190,14,0	1/1:3,0:3:9.03:118,9,0	1/1:5,1:6:18.06:239,18,0	1/1:9,0:9:24.08:306,24,0	1/1:3,0:3:9.03:115,9,0	1/1:6,0:6:15.05:185,15,0	1/1:5,1:6:15.05:191,15,0	1/1:3,0:3:6.02:74,6,0	1/1:11,0:12:30.10:382,30,0	1/1:10,0:10:17.95:209,18,0	1/1:16,2:18:42.14:547,42,0	1/1:6,0:6:15.05:198,15,0
chr10	49386517	.	TTTA	T	5859.74	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=1.742;DP=158;FS=40.768;HRun=0;HaplotypeScore=106.9224;InbreedingCoeff=0.5077;MQ=45.28;MQ0=0;MQRankSum=-2.516;QD=37.80;ReadPosRankSum=2.478;VQSLOD=3.5406;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,3:3:9.03:109,9,0	1/1:0,6:6:18.06:232,18,0	0/0:2,0:2:6.02:0,6,87	0/0:1,0:1:0:0,0,0	1/1:0,2:2:6.02:76,6,0	1/1:2,7:9:27.09:346,27,0	1/1:0,7:7:21.07:267,21,0	1/1:0,4:4:12.04:154,12,0	1/1:0,8:8:24.08:307,24,0	1/1:0,2:2:6.02:80,6,0	1/1:0,4:4:12.04:152,12,0	1/1:0,4:4:12.04:149,12,0	1/1:1,3:4:12.04:154,12,0	1/1:0,7:7:21.07:266,21,0	1/1:1,10:11:33.11:423,33,0	1/1:1,9:10:30.10:390,30,0	1/1:0,5:5:15.05:192,15,0	1/1:0,3:3:9.03:118,9,0	1/1:1,5:6:18.06:239,18,0	1/1:0,8:8:24.08:306,24,0	1/1:0,3:3:9.03:115,9,0	1/1:0,5:5:15.05:185,15,0	1/1:1,4:5:15.05:191,15,0	1/1:0,3:3:6.02:74,6,0	1/1:1,9:10:30.10:382,30,0	1/1:0,7:7:17.08:208,17,0	1/1:2,12:14:42.14:547,42,0	1/1:0,5:5:15.05:198,15,0
chr10	49396520	.	CT	C	2389.24	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=11.365;DP=663;FS=0.973;HRun=3;HaplotypeScore=82.9858;InbreedingCoeff=0.9995;MQ=81.83;MQ0=0;MQRankSum=-0.742;QD=27.15;ReadPosRankSum=1.391;VQSLOD=2.9482;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,141,2009	0/0:16,0:16:48.14:0,48,657	0/0:18,0:18:44.13:0,44,572	0/0:23,0:23:37.87:0,38,406	0/0:28,0:28:71.80:0,72,781	0/0:26,0:26:72.22:0,72,1002	0/0:18,0:18:51.17:0,51,728	0/0:33,0:33:99:0,99,1410	0/0:22,0:22:66.19:0,66,912	0/0:24,0:23:63.20:0,63,891	0/0:17,0:17:42.04:0,42,531	0/0:21,0:21:60.19:0,60,844	0/0:18,0:18:51.16:0,51,717	0/0:32,0:32:96.31:0,96,1363	0/0:22,0:22:63.21:0,63,905	0/0:35,0:35:99:0,105,1512	0/0:29,0:29:87.28:0,87,1235	0/0:25,0:25:75.15:0,75,1030	1/1:3,19:22:54.15:655,54,0	1/1:0,20:20:45.14:557,45,0	1/1:2,28:30:75.24:929,75,0	0/0:26,0:26:75.08:0,75,956	0/0:15,0:15:36.01:0,36,437	0/0:28,0:28:78.25:0,78,1105	0/0:15,0:15:39.13:0,39,556	0/0:25,0:25:75.23:0,75,1046	1/1:1,15:16:33.10:409,33,0	0/0:9,0:9:27.09:0,27,388
chr10	49397232	.	GTT	G	2541.57	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=9.639;DP=533;FS=8.179;HRun=10;HaplotypeScore=124.6823;InbreedingCoeff=0.9018;MQ=61.62;MQ0=6;MQRankSum=-10.117;QD=18.69;ReadPosRankSum=1.610;VQSLOD=1.8364;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:69.16:0,69,891	1/1:7,4:11:26.97:248,27,0	0/0:27,0:12:20.25:0,20,250	0/0:21,0:9:13.83:0,14,126	0/0:8,0:18:40.63:0,41,314	0/0:21,0:21:51.17:0,51,796	0/0:23,0:25:71.68:0,72,1049	0/0:18,0:20:26.32:0,26,223	0/0:19,0:20:47.65:0,48,721	0/0:16,0:18:38.31:0,38,283	0/0:20,0:24:50.42:0,50,448	1/1:4,9:13:39.03:391,39,0	1/1:6,6:12:23.90:201,24,0	0/0:14,0:22:47.21:0,47,332	1/1:9,14:23:66:642,66,0	0/0:14,0:13:23.99:0,24,165	0/0:14,0:21:46.80:0,47,356	0/0:14,0:24:53.40:0,53,368	0/1:16,0:16:8.31:8,0,95	0/0:13,0:12:19.38:0,19,120	0/0:14,0:14:15.59:0,16,120	1/1:5,11:16:35.97:347,36,0	1/1:12,16:28:62.97:636,63,0	1/1:14,3:17:29.95:267,30,0	0/0:10,0:18:37.66:0,38,281	0/0:15,0:17:27.67:0,28,185	0/0:19,0:18:9.49:0,9,104	0/0:7,0:9:22.54:0,23,175
chr10	49397240	.	TTTG	T	4311.95	PASS	AB=1.000;AC=16;AF=0.286;AN=56;BaseQRankSum=8.277;DP=568;FS=6.998;HRun=0;HaplotypeScore=143.5325;InbreedingCoeff=0.8408;MQ=56.26;MQ0=10;MQRankSum=-10.239;QD=28.37;ReadPosRankSum=1.832;VQSLOD=5.0181;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:69.21:0,69,1064	1/1:8,3:11:29.68:407,30,0	0/0:38,0:12:16.11:0,16,327	0/0:25,0:9:16.80:0,17,167	0/0:24,0:23:61.08:0,61,590	0/0:19,0:19:54.18:0,54,1095	0/0:29,0:29:84:0,84,1555	0/0:16,0:16:40.86:0,41,424	0/0:18,0:18:54.16:0,54,1104	0/0:20,0:20:50.54:0,51,482	0/0:24,0:23:60.34:0,60,669	1/1:12,3:15:44.32:575,44,0	1/1:6,5:11:26.68:390,27,0	0/0:24,0:23:64.34:0,64,624	1/1:20,6:26:69.34:976,69,0	0/0:17,0:16:28.53:0,29,219	0/0:22,0:22:56.31:0,56,623	0/0:28,0:28:69.69:0,70,678	0/1:14,0:14:14.34:14,0,188	0/1:15,0:14:2.39:2,0,110	0/0:16,0:16:7.40:0,7,122	1/1:15,2:17:46.17:565,46,0	1/1:21,5:26:73.58:930,74,0	1/1:8,9:17:33.16:453,33,0	0/0:18,0:18:47.80:0,48,500	0/0:16,0:15:37.08:0,37,314	0/0:16,0:15:27.81:0,28,184	0/0:11,0:11:28.53:0,29,271
chr10	49397249	.	GGGTTTGTTT	G	6988.24	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=4.164;DP=542;FS=1.367;HRun=0;HaplotypeScore=180.4339;InbreedingCoeff=0.9660;MQ=52.15;MQ0=11;MQRankSum=-11.143;QD=57.75;ReadPosRankSum=3.852;VQSLOD=4.6568;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:56.42:0,56,1893	1/1:3,7:10:23.91:476,24,0	0/0:39,0:13:27.06:0,27,877	0/0:29,0:11:11.26:0,11,673	0/0:25,0:24:66.12:0,66,1006	0/0:18,0:18:48.16:0,48,1877	0/0:32,0:32:90.26:0,90,3216	0/0:14,0:14:35.92:0,36,495	0/0:20,0:20:60.17:0,60,2330	0/0:17,0:17:47.96:0,48,655	0/0:19,0:18:51.06:0,51,745	1/1:3,12:15:38.96:1014,39,0	1/1:5,6:11:26.61:428,27,0	0/0:23,0:22:58.41:0,58,866	1/1:7,19:26:71.92:1765,72,0	0/0:11,0:10:15.01:0,15,189	0/0:23,0:23:54.48:0,54,846	0/0:25,0:25:63.19:0,63,1032	0/0:16,0:15:37.50:0,38,496	0/0:11,0:10:20.95:0,21,323	0/0:12,0:12:5.58:0,6,63	1/1:4,13:17:48.06:1211,48,0	1/1:6,17:23:65.88:1641,66,0	1/1:9,10:19:23.75:453,24,0	0/0:21,0:21:51.10:0,51,745	0/0:13,0:12:35.84:0,36,437	0/0:12,0:11:18.95:0,19,331	0/0:8,0:8:19.31:0,19,315
chr10	49397250	.	GGTTT	G	7041.39	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=10.025;DP=538;FS=6.186;HRun=0;HaplotypeScore=134.9180;InbreedingCoeff=0.9153;MQ=52.01;MQ0=11;MQRankSum=-6.541;QD=19.13;ReadPosRankSum=2.756;VQSLOD=4.4387;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:48.16:0,48,986	1/1:10,0:10:12.36:100,12,0	0/0:38,0:12:26.64:0,27,476	0/0:29,0:11:17.56:0,18,298	1/1:25,1:25:56.91:686,57,0	0/0:17,0:17:36.12:0,36,874	0/0:33,0:33:72.10:0,72,1497	1/1:15,0:15:20.96:228,21,0	0/0:20,0:20:48.13:0,48,1058	1/1:17,0:17:33.08:425,33,0	1/1:17,2:18:32.99:406,33,0	1/1:15,0:15:32.91:294,33,0	1/1:11,0:11:9.48:85,9,0	1/1:22,0:21:42.12:577,42,0	1/1:26,0:26:56.43:510,56,0	1/1:12,0:11:12:126,12,0	1/1:23,0:23:44.96:553,45,0	1/1:23,1:25:54.03:694,54,0	1/1:13,0:12:17.93:198,18,0	1/1:11,0:10:14.83:139,15,0	1/1:12,0:12:2.99:24,3,0	1/1:16,0:17:39.22:341,39,0	1/1:23,0:23:51.06:475,51,0	1/1:19,0:19:10.90:96,11,0	1/1:20,1:21:39.09:533,39,0	1/1:12,0:12:21.07:310,21,0	1/1:11,0:10:11.32:80,11,0	1/1:7,0:7:12.04:161,12,0
chr10	49397251	.	GTTT	G	7395.91	PASS	AB=1.000;AC=42;AF=0.750;AN=56;BaseQRankSum=6.978;DP=527;FS=8.031;HRun=3;HaplotypeScore=123.3112;InbreedingCoeff=0.5731;MQ=53.20;MQ0=11;MQRankSum=-6.374;QD=19.01;ReadPosRankSum=5.655;VQSLOD=1.4454;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:29:11.39:11,0,743	0/1:10,0:10:7.70:56,0,8	0/0:39,0:13:27.44:0,27,448	0/0:29,0:11:23.40:0,23,331	1/1:7,19:25:53.88:766,54,0	0/0:18,0:18:50.93:0,51,977	0/0:32,0:32:90.22:0,90,1665	1/1:6,9:15:0.10:291,0,0	0/0:20,0:20:60.14:0,60,1136	1/1:9,7:17:42.07:566,42,0	1/1:13,6:18:21.60:382,22,0	1/1:15,0:15:22.89:219,23,0	0/1:11,0:11:18.95:44,0,19	1/1:6,16:21:41.31:655,41,0	1/1:26,0:26:29.76:360,30,0	1/1:0,7:10:12.04:174,12,0	1/1:10,12:22:31.40:574,31,0	1/1:8,16:24:51.71:750,52,0	1/1:2,9:11:24.07:328,24,0	1/1:3,0:8:20.93:248,21,0	1/1:3,6:10:5.85:53,6,0	1/1:16,0:17:24.20:249,24,0	1/1:23,0:23:23.56:339,24,0	0/1:19,0:19:15.46:52,0,15	1/1:5,16:21:31.78:577,32,0	1/1:4,9:12:29.09:371,29,0	1/1:4,0:10:17.59:150,18,0	1/1:2,5:7:10.88:180,11,0
chr10	49398687	.	CGACCACTGAAACGACTA	C	23473.35	PASS	AC=42;AF=0.778;AN=54;BaseQRankSum=14.081;DP=500;FS=9.489;HRun=0;HaplotypeScore=244.2010;InbreedingCoeff=0.9035;MQ=92.92;MQ0=0;MQRankSum=-12.400;QD=66.88;ReadPosRankSum=4.606;VQSLOD=2.9729;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:96.32:0,96,7201	1/1:1,4:5:9.03:424,9,0	0/0:26,0:27:44.98:0,45,2237	0/0:24,0:25:46.04:0,46,2807	1/1:3,11:14:17.98:545,18,0	0/0:21,0:21:54.15:0,54,3809	0/0:21,0:21:57.20:0,57,4295	1/1:17,8:25:24.07:578,24,0	0/0:15,0:15:33.11:0,33,2485	1/1:10,16:26:45.15:1865,45,0	1/1:3,8:11:15.05:642,15,0	1/1:5,11:16:24.08:1130,24,0	1/1:5,23:28:63.22:2945,63,0	1/1:6,11:17:30.10:1367,30,0	1/1:3,10:13:21.07:988,21,0	1/1:4,13:17:33.11:1553,33,0	1/1:6,7:13:9.03:424,9,0	./.	1/1:8,10:18:27.09:1190,27,0	1/1:6,19:25:57.11:2277,57,0	1/1:9,2:11:3.48:83,3,0	1/1:4,12:16:30.10:1341,30,0	1/1:6,9:15:15.05:569,15,0	1/1:9,9:18:8.66:363,9,0	1/1:8,14:22:30.10:1342,30,0	1/1:8,15:23:45.15:2011,45,0	1/1:5,10:14:33.11:1553,33,0	1/1:1,2:3:6.02:282,6,0
chr10	49399842	.	GT	G	17020.52	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=10.878;DP=626;FS=12.282;HRun=2;HaplotypeScore=60.8768;InbreedingCoeff=0.9918;MQ=95.66;MQ0=0;MQRankSum=-6.986;QD=36.45;ReadPosRankSum=5.810;VQSLOD=4.1977;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:90.30:0,90,1347	1/1:1,6:7:18.06:234,18,0	0/0:32,0:32:96.32:0,96,1409	0/0:26,0:26:77.06:0,77,1077	1/1:0,28:28:75.24:973,75,0	0/0:22,0:22:66.22:0,66,989	0/0:29,0:29:87.26:0,87,1264	1/1:0,24:24:72.22:920,72,0	0/0:18,0:18:54.16:0,54,771	1/1:1,22:23:66.18:827,66,0	1/1:0,19:19:51.17:662,51,0	1/1:0,29:29:84.27:1091,84,0	1/1:0,18:18:54.18:701,54,0	1/1:0,19:19:54.18:701,54,0	1/1:0,24:24:66.21:857,66,0	1/1:0,25:25:69.22:896,69,0	1/1:0,10:10:30.10:390,30,0	1/1:0,5:5:12.04:156,12,0	1/1:3,17:20:51.17:662,51,0	1/1:0,28:28:81.26:1052,81,0	1/1:0,30:30:84.27:1091,84,0	1/1:0,20:20:60.19:779,60,0	1/1:0,22:22:66.21:857,66,0	1/1:0,19:19:54.18:701,54,0	1/1:1,20:21:48.16:623,48,0	1/1:0,28:28:84.24:1057,84,0	1/1:0,39:39:99:1441,111,0	1/1:0,9:9:27.09:350,27,0
chr10	49400259	.	ATGTGTGTGTGTGTGTG	A	2437.51	PASS	AB=0.916;AC=22;AF=0.423;AN=52;BaseQRankSum=7.353;DP=590;FS=19.757;HRun=0;HaplotypeScore=244.3291;InbreedingCoeff=0.5105;MQ=62.03;MQ0=7;MQRankSum=-6.312;QD=10.16;ReadPosRankSum=0.484;VQSLOD=0.8523;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:36:30.10:0,30,1182	./.	0/0:34,0:26:2.68:0,3,11	./.	0/0:10,0:9:6.02:0,6,137	0/0:15,0:16:12.87:0,13,667	0/0:18,0:18:15.05:0,15,670	0/0:28,0:24:9.10:0,9,61	0/0:16,0:18:27.07:0,27,1067	0/0:28,0:28:23.15:0,23,517	0/0:9,0:9:3:0,3,25	1/1:17,3:20:8.84:339,9,0	1/1:24,2:26:11.34:398,11,0	0/0:12,0:12:4.21:0,4,54	1/1:23,2:24:9.03:314,9,0	0/1:28,0:33:99:505,0,398	0/1:25,0:25:99:159,0,152	0/0:23,0:23:18.67:0,19,294	0/0:26,0:25:0:0,0,0	1/1:14,0:17:3.01:112,3,0	0/0:40,0:38:0:0,0,0	1/1:21,2:23:3.01:39,3,0	1/1:12,1:12:3.01:131,3,0	1/1:24,1:25:3.01:51,3,0	1/1:12,0:14:3:32,3,0	0/0:23,0:23:15.05:0,15,352	1/1:13,0:15:12.04:430,12,0	1/1:1,0:3:6.01:97,6,0
chr10	49400330	.	TTGTGTGTGTGTG	T	6540.20	PASS	AB=0.851;AC=27;AF=0.500;AN=54;BaseQRankSum=7.227;DP=591;FS=10.074;HRun=0;HaplotypeScore=273.0848;InbreedingCoeff=0.3584;MQ=35.12;MQ0=42;MQRankSum=-6.489;QD=17.53;ReadPosRankSum=-5.639;VQSLOD=1.6324;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:23:51.09:0,51,2137	1/1:3,3:6:10.11:318,10,0	./.	0/0:25,0:2:6.02:0,6,202	1/1:20,0:23:13.07:138,13,0	0/0:7,0:11:18.06:0,18,437	0/0:21,0:16:16.35:0,16,736	0/0:26,0:15:15.05:0,15,614	0/0:17,0:18:46.67:0,47,2359	0/1:20,0:23:99:530,0,746	0/1:22,0:22:74.35:74,0,279	1/1:15,7:22:33.56:934,34,0	1/1:23,9:32:33.12:990,33,0	1/1:21,0:24:17.24:371,17,0	0/1:24,7:29:99:889,0,123	1/1:29,0:30:11.68:101,12,0	0/1:21,0:25:99:297,0,600	0/1:11,0:12:67.63:68,0,162	0/0:11,0:4:6.02:0,6,239	0/0:15,0:16:4.40:0,4,318	0/0:23,0:19:21:0,21,572	1/1:19,3:20:11.91:312,12,0	0/1:16,8:23:99:804,0,115	1/1:22,4:23:11.09:174,11,0	1/1:17,0:21:5.18:246,5,0	0/1:17,0:19:99:211,0,863	0/0:14,0:17:29.21:0,29,747	1/1:1,0:2:3.01:84,3,0
chr10	49400354	.	GTGTGTGTGTGTA	G	5710.09	PASS	AB=0.991;AC=25;AF=0.463;AN=54;BaseQRankSum=7.540;DP=480;FS=5.340;HRun=0;HaplotypeScore=226.0744;InbreedingCoeff=0.2665;MQ=34.82;MQ0=44;MQRankSum=-7.389;QD=21.31;ReadPosRankSum=5.026;VQSLOD=3.3886;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:32:78.37:0,78,2626	1/1:5,0:5:8.87:263,9,0	./.	0/0:26,0:2:6.02:0,6,188	0/1:13,0:13:16.98:87,0,17	0/0:16,0:15:25.31:0,25,676	0/0:16,0:11:22.30:0,22,804	0/0:13,0:8:18.94:0,19,572	0/0:22,0:22:58.03:0,58,2521	0/1:15,0:14:99:483,0,614	0/1:12,0:12:52.40:52,0,265	1/1:20,2:22:22.92:815,23,0	1/1:28,0:28:41.90:908,42,0	1/1:13,0:13:15.99:325,16,0	0/1:24,1:25:99:775,0,104	0/1:15,0:15:9.29:67,0,9	0/1:16,0:14:99:257,0,516	0/1:10,0:9:53.09:53,0,304	0/0:9,0:7:20.66:0,21,362	0/0:18,0:17:5.57:0,6,308	0/0:28,0:21:27:0,27,634	1/1:16,0:16:14.82:292,15,0	0/1:23,1:23:98:689,0,98	1/1:23,1:25:9.99:138,10,0	1/1:12,0:12:13.29:218,13,0	0/1:14,0:12:99:203,0,726	0/0:14,0:14:30.57:0,31,683	1/1:3,0:2:5.69:85,6,0
chr10	49400358	.	GTGTGTGTAGGCTTATTGATGATT	G	2314.39	PASS	AB=0.971;AC=14;AF=0.259;AN=54;BaseQRankSum=0.111;DP=475;FS=3.815;HRun=0;HaplotypeScore=288.7585;InbreedingCoeff=-0.1540;MQ=34.68;MQ0=46;MQRankSum=-3.417;QD=10.33;ReadPosRankSum=-2.145;VQSLOD=2.1317;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:30:37.64:0,38,2721	0/0:5,0:5:7.19:0,7,27	./.	0/0:27,0:2:2.56:0,3,44	0/0:13,0:13:8.26:0,8,96	0/0:14,0:13:33.04:0,33,1490	0/0:15,0:11:21.07:0,21,1056	0/1:18,0:11:47.46:47,0,488	0/0:23,0:23:44.24:0,44,2448	0/0:13,0:13:9.84:0,10,364	0/1:12,0:12:0:0,0,1	0/1:22,0:22:47.41:238,0,47	0/1:14,16:30:99:803,0,325	0/0:12,0:12:6.02:0,6,112	0/1:25,0:25:5.60:442,0,6	0/1:15,0:15:23.66:232,0,24	0/1:15,0:13:29.73:30,0,218	0/0:10,0:9:17.42:0,17,613	0/0:12,0:7:10.68:0,11,496	0/1:17,0:16:38.19:38,0,183	0/1:27,0:21:99:107,0,461	1/1:5,11:16:5.80:299,6,0	0/0:24,0:23:5.44:0,5,34	0/0:23,0:23:1.72:0,2,5	0/0:11,0:11:1.41:0,1,4	0/1:14,0:12:51.48:51,0,66	0/1:10,0:10:28.47:28,0,302	0/1:3,0:2:27.47:142,0,27
chr10	49400364	.	GTAGGCTTATTGATGATT	G	2094.14	PASS	AB=0.916;AC=12;AF=0.222;AN=54;BaseQRankSum=1.237;DP=449;FS=2.493;HRun=0;HaplotypeScore=243.5469;InbreedingCoeff=-0.3267;MQ=34.63;MQ0=46;MQRankSum=-3.191;QD=10.27;ReadPosRankSum=-1.579;VQSLOD=2.5586;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:23:41.48:0,41,3097	0/0:3,3:6:8.73:0,9,30	./.	0/0:23,0:2:2.68:0,3,44	0/0:12,0:12:13.99:0,14,196	0/0:13,0:12:36.06:0,36,1722	0/0:11,0:10:24.08:0,24,1292	0/1:20,0:14:32.96:33,0,1010	0/0:20,0:21:51.15:0,51,3443	0/0:12,0:12:9.01:0,9,252	0/0:11,0:11:4.46:0,4,16	0/1:11,11:22:99:207,0,109	0/1:28,2:30:99:657,0,241	0/0:12,0:12:4.63:0,5,115	0/1:19,6:25:56.86:447,0,57	0/1:13,2:15:27.20:230,0,27	0/1:15,0:13:80.10:80,0,177	0/0:10,0:9:18.06:0,18,751	0/0:12,0:6:5.12:0,5,426	0/1:15,0:15:35.34:35,0,151	0/1:25,0:20:99:107,0,547	0/1:16,0:16:15.51:263,0,16	0/0:14,8:22:17.68:0,18,64	0/0:16,8:23:3.88:0,4,13	0/0:11,0:11:9.12:0,9,38	0/1:10,0:9:7.99:8,0,37	0/1:7,0:7:28.57:29,0,329	0/1:2,1:2:27.47:142,0,27
chr10	49400381	.	TTGTGTGTGTG	T	452.08	PASS	AB=0.938;AC=10;AF=0.185;AN=54;BaseQRankSum=4.299;DP=447;FS=12.586;HRun=0;HaplotypeScore=219.8429;InbreedingCoeff=-0.0247;MQ=37.22;MQ0=47;MQRankSum=-3.601;QD=3.18;ReadPosRankSum=-0.607;VQSLOD=1.0687;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:24:60.18:0,60,2636	0/0:8,0:8:3.01:0,3,50	0/0:24,0:5:15.05:0,15,662	./.	1/1:15,0:15:8.05:50,8,0	0/0:16,0:17:45.14:0,45,1899	0/0:11,0:9:18.06:0,18,841	0/1:15,11:15:99:172,0,351	0/0:22,0:22:60.18:0,60,2532	0/0:9,0:9:14.22:0,14,332	0/1:6,0:6:40.96:41,0,261	0/0:23,0:23:10.56:0,11,169	0/1:29,0:29:70.69:71,0,115	0/1:11,0:11:23.51:24,0,181	0/1:20,0:20:14.65:29,0,15	0/0:12,0:12:12.03:0,12,337	0/0:8,0:7:8.90:0,9,136	0/1:6,2:8:99:152,0,303	0/0:7,0:6:15.05:0,15,622	0/0:12,0:17:14.30:0,14,398	0/0:21,0:18:7.53:0,8,591	0/1:17,0:17:13.75:14,0,14	0/0:18,0:18:6.13:0,6,23	0/0:17,0:16:0.32:0,0,0	0/1:9,0:9:40.76:41,0,81	0/0:14,0:12:24.02:0,24,1017	0/0:9,0:10:15.05:0,15,540	0/0:5,0:5:5.72:0,6,252
chr10	49401159	.	G	GTA	976.81	PASS	AB=0.980;AC=32;AF=0.615;AN=52;BaseQRankSum=10.080;DP=387;FS=14.393;HRun=0;HaplotypeScore=187.3619;InbreedingCoeff=-0.4227;MQ=28.77;MQ0=15;MQRankSum=-0.828;QD=2.58;ReadPosRankSum=-3.324;VQSLOD=0.4331;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:26:7.51:8,0,40	0/1:7,0:7:18.60:19,0,68	./.	./.	1/1:18,0:17:3.81:12,4,0	0/1:11,0:10:36.60:37,0,96	0/1:22,1:22:99:101,0,120	0/1:34,0:23:99:383,0,181	0/1:8,0:8:16.02:16,0,28	0/1:15,1:16:77.05:77,0,336	1/1:10,0:10:10.01:42,10,0	0/1:14,1:14:14.05:14,0,117	0/0:9,0:9:10.69:0,11,141	1/1:6,1:7:6.67:36,7,0	0/1:14,0:13:10.34:10,0,62	0/1:16,0:14:4.01:4,0,33	0/1:14,2:16:59.46:59,0,154	0/1:7,0:5:8.84:9,0,84	0/1:14,0:12:6.52:7,0,322	0/1:9,0:9:24.86:25,0,29	0/1:21,0:19:8.69:9,0,14	1/1:14,0:13:4.74:25,5,0	1/1:18,0:17:10.38:44,10,0	1/1:18,2:20:2.19:16,2,0	1/1:17,1:18:13.76:70,14,0	0/1:12,0:11:39.31:39,0,275	0/1:18,1:19:35.32:35,0,162	0/1:3,0:3:4.73:30,0,5
chr10	49402477	.	G	GT	15275.07	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=12.968;DP=680;FS=3.217;HRun=7;HaplotypeScore=146.9279;InbreedingCoeff=0.9997;MQ=81.32;MQ0=0;MQRankSum=-4.639;QD=29.38;ReadPosRankSum=5.549;VQSLOD=2.8609;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:87.11:0,87,833	1/1:2,13:15:39.59:468,40,0	0/0:34,0:32:65.61:0,66,607	0/0:26,0:26:52.27:0,52,419	1/1:7,22:29:66.66:778,67,0	0/0:17,0:17:48.08:0,48,463	0/0:28,0:28:72.06:0,72,677	1/1:5,23:28:69.60:784,70,0	0/0:22,0:22:63.10:0,63,608	1/1:7,21:28:69.67:812,70,0	1/1:3,19:23:57.54:639,58,0	1/1:2,18:20:48.62:576,49,0	1/1:1,26:27:75.21:887,75,0	1/1:1,22:23:60.18:713,60,0	1/1:1,22:24:66.07:770,66,0	1/1:5,21:26:54.64:648,55,0	1/1:0,23:24:63.19:754,63,0	1/1:2,19:21:36.24:524,36,0	1/1:9,17:26:54.61:620,55,0	1/1:3,20:23:63.12:724,63,0	1/1:2,12:14:33.10:393,33,0	1/1:3,21:24:60.61:702,61,0	1/1:1,18:21:50.82:672,51,0	1/1:0,16:16:45.14:539,45,0	1/1:2,23:25:60.18:719,60,0	1/1:3,33:36:92.82:1155,93,0	1/1:4,33:38:90.27:1074,90,0	1/1:0,9:9:27.08:324,27,0
chr10	49402822	.	CGT	C	9156.12	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=14.862;DP=737;FS=0.295;HRun=0;HaplotypeScore=95.3256;InbreedingCoeff=0.9999;MQ=75.86;MQ0=3;MQRankSum=-2.838;QD=33.54;ReadPosRankSum=1.954;VQSLOD=6.9115;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,127,2199	0/0:13,0:13:39.13:0,39,672	0/0:39,0:32:80.40:0,80,1368	0/0:43,0:32:79.34:0,79,1258	1/1:2,23:25:57.19:771,57,0	0/0:26,0:26:78.27:0,78,1357	0/0:30,0:30:84.27:0,84,1443	1/1:5,39:44:99:1510,114,0	0/0:19,0:19:51.17:0,51,894	1/1:2,27:29:78.26:1054,78,0	1/1:1,18:19:45.15:608,45,0	0/0:26,0:26:75.26:0,75,1298	0/0:24,0:24:69.22:0,69,1164	1/1:1,17:18:42.14:568,42,0	0/0:24,0:24:69.24:0,69,1210	1/1:0,18:18:48.16:649,48,0	1/1:5,30:34:81.27:1095,81,0	1/1:2,14:16:39.13:524,39,0	0/0:13,0:13:36.12:0,36,610	0/0:26,0:26:72.19:0,72,1175	0/0:25,0:25:75.24:0,75,1281	0/0:18,0:18:48.15:0,48,810	0/0:24,0:24:69.21:0,69,1152	0/0:30,0:30:81.28:0,81,1412	1/1:2,27:29:75.25:1015,75,0	1/1:4,22:26:60.18:793,60,0	0/0:34,0:34:99:0,99,1705	1/1:0,14:14:42.14:568,42,0
chr10	49405562	.	A	AT	4816.18	PASS	AB=0.823;AC=42;AF=0.750;AN=56;BaseQRankSum=-0.566;DP=480;FS=2.922;HRun=11;HaplotypeScore=100.7301;InbreedingCoeff=0.5672;MQ=68.43;MQ0=6;MQRankSum=-4.080;QD=12.04;ReadPosRankSum=-1.665;VQSLOD=4.3805;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,1:23:1.86:0,2,195	1/1:5,0:9:14.16:70,14,0	0/1:25,0:15:5.42:5,0,57	0/0:17,0:8:2.70:0,3,21	1/1:12,9:22:41.71:372,42,0	0/0:12,0:12:26.88:0,27,207	0/0:14,0:15:25.91:0,26,191	1/1:22,12:33:8.33:243,8,0	0/0:13,0:13:17.86:0,18,135	1/1:9,9:18:30:294,30,0	0/1:13,10:23:13.42:281,0,13	1/1:14,0:15:29.23:158,29,0	1/1:8,1:10:9.40:67,9,0	1/1:15,6:21:38.92:358,39,0	1/1:9,0:17:33.92:182,34,0	1/1:8,2:16:28.94:176,29,0	0/1:6,12:19:4.55:307,0,5	1/1:10,4:15:2.46:175,2,0	1/1:10,7:15:9.82:281,10,0	1/1:16,6:21:12.77:292,13,0	1/1:3,3:7:11.86:106,12,0	1/1:12,1:16:32.06:209,32,0	1/1:11,0:13:8.76:53,9,0	1/1:6,1:13:23.95:137,24,0	1/1:6,16:22:13.59:484,14,0	1/1:6,7:14:26.81:244,27,0	1/1:12,7:19:36.25:323,36,0	0/1:9,0:9:0:0,0,0
chr10	49405575	.	GTTC	G	133.82	PASS	AB=0.975;AC=10;AF=0.179;AN=56;BaseQRankSum=2.015;DP=414;FS=32.492;HRun=0;HaplotypeScore=81.2774;InbreedingCoeff=-0.0677;MQ=56.21;MQ0=12;MQRankSum=-5.669;QD=1.15;ReadPosRankSum=-1.384;VQSLOD=-0.0074;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:0.59:0,1,309	0/1:7,0:7:8.33:8,0,115	0/0:16,0:6:10.69:0,11,56	0/1:13,0:5:0.93:1,0,12	0/0:21,0:21:6.30:0,6,253	0/0:11,0:11:23.27:0,23,301	0/0:14,0:14:21.12:0,21,330	0/0:26,0:25:25:0,25,308	0/0:12,0:12:14.54:0,15,192	0/0:15,0:15:31.74:0,32,224	0/1:19,0:19:0.57:1,0,187	0/1:13,0:12:39.03:39,0,60	0/1:9,1:11:24.63:78,0,25	0/1:17,0:17:40.54:41,0,127	0/1:19,0:18:51.77:52,0,147	0/0:15,0:14:29.38:0,29,199	0/0:17,0:16:43.16:0,43,338	0/1:14,0:12:8.02:8,0,130	0/0:19,1:18:34.87:0,35,351	0/0:16,1:16:1.92:0,2,160	0/0:4,0:4:12:0,12,111	0/0:11,0:11:9.49:0,9,128	0/0:8,1:9:8.94:0,9,66	0/0:14,0:12:16.04:0,16,102	0/0:21,0:21:38.51:0,39,414	0/0:13,0:13:11.08:0,11,167	0/0:20,1:21:0.47:0,0,219	1/1:0,2:2:3.01:31,3,0
chr10	49406200	.	CT	C	3523.31	PASS	AB=0.709;AC=29;AF=0.518;AN=56;BaseQRankSum=4.934;DP=613;FS=3.019;HRun=14;HaplotypeScore=74.0611;InbreedingCoeff=0.5521;MQ=77.51;MQ0=1;MQRankSum=0.220;QD=9.52;ReadPosRankSum=3.347;VQSLOD=3.3755;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,3:40:9.67:0,10,646	0/0:5,0:6:8.21:0,8,106	0/0:25,0:21:5.10:0,5,147	0/0:17,0:12:13.13:0,13,66	1/1:6,20:27:18.60:265,19,0	0/1:21,3:25:4.85:5,0,374	0/0:25,2:29:17.29:0,17,423	1/1:13,21:38:42.83:387,43,0	0/0:19,0:19:40.27:0,40,357	1/1:10,19:30:52.43:355,52,0	1/1:6,15:21:38.57:267,39,0	0/0:22,0:22:27.57:0,28,393	0/0:25,1:26:46.38:0,46,523	1/1:5,13:20:8.93:188,9,0	0/0:16,3:20:9.71:0,10,353	1/1:7,8:17:5.96:168,6,0	0/1:11,21:34:14.32:345,0,14	1/1:8,9:18:6.92:183,7,0	0/1:8,9:18:70.48:150,0,70	1/1:4,6:16:5.57:113,6,0	1/1:2,5:8:16.91:109,17,0	0/1:15,4:19:6.98:7,0,224	0/0:17,0:18:18.25:0,18,280	0/0:17,0:19:52.42:0,52,399	1/1:7,11:19:9.77:204,10,0	1/1:4,19:23:56.46:390,56,0	0/1:7,16:24:6.09:244,0,6	1/1:5,7:13:1:142,1,0
chr10	49406863	.	A	AG	10427.48	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-16.978;DP=741;FS=4.271;HRun=1;HaplotypeScore=75.2091;InbreedingCoeff=0.9982;MQ=89.00;MQ0=1;MQRankSum=-0.462;QD=40.73;ReadPosRankSum=0.346;VQSLOD=5.3479;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,153,1985	0/0:7,0:7:21.07:0,21,273	0/0:22,0:24:61.95:0,62,784	0/0:40,0:38:68.56:0,69,822	1/1:2,28:30:51.36:1253,51,0	0/0:19,0:19:54.18:0,54,700	0/0:35,0:35:99:0,102,1310	1/1:1,27:28:78.25:1148,78,0	0/0:25,0:25:75.24:0,75,972	1/1:1,20:21:60.20:900,60,0	1/1:1,15:16:36.12:540,36,0	0/0:30,0:30:90.27:0,90,1141	0/0:27,0:27:78.23:0,78,997	1/1:1,41:42:99:1664,111,0	0/0:34,0:34:99:0,102,1311	1/1:0,25:25:72.24:1079,72,0	1/1:0,26:26:72.24:1079,72,0	1/1:2,14:16:42.14:630,42,0	0/0:20,0:20:57.15:0,57,708	0/0:23,0:23:66.19:0,66,829	0/0:42,0:42:99:0,111,1426	0/0:19,0:19:54.18:0,54,700	0/0:26,0:26:69.22:0,69,896	0/0:26,0:26:78.25:0,78,1013	1/1:1,22:23:60.20:899,60,0	1/1:0,23:23:66.21:966,66,0	0/0:36,0:35:99:0,102,1324	1/1:0,6:6:18.06:270,18,0
chr10	49407114	.	A	AGTGT	1155.81	PASS	AB=1.000;AC=24;AF=0.522;AN=46;BaseQRankSum=-3.787;DP=636;FS=5.778;HRun=0;HaplotypeScore=116.7677;InbreedingCoeff=0.3996;MQ=67.12;MQ0=17;MQRankSum=2.846;QD=3.38;ReadPosRankSum=-2.046;VQSLOD=1.5562;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:33,0:33:8.80:65,9,0	./.	./.	./.	./.	1/1:24,13:37:3.01:70,3,0	0/0:24,0:24:9.01:0,9,116	./.	0/0:14,0:14:3:0,3,41	0/1:21,0:18:0.03:0,0,1	0/0:17,0:17:0.89:0,1,2	1/1:16,0:16:9:99,9,0	1/1:13,12:27:3.01:70,3,0	0/0:14,0:14:2.49:0,2,9	1/1:14,1:23:3.01:52,3,0	0/0:24,0:24:8.51:0,9,80	0/0:23,0:23:1.62:0,2,69	0/0:10,0:10:5.99:0,6,56	0/1:21,0:20:30.97:81,0,31	1/1:20,0:20:18.05:260,18,0	1/1:27,0:27:21.93:249,22,0	0/1:23,0:22:0:0,0,0	1/1:18,0:18:6.02:94,6,0	1/1:22,9:37:8.24:94,8,0	0/0:22,0:22:2.68:0,3,11	0/1:20,0:19:25.08:25,0,44	1/1:9,8:17:6.49:141,6,0	0/0:12,0:9:6.01:0,6,56
chr10	49407156	.	TGTGTGTGTAG	T	2050.78	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=5.634;DP=550;FS=1.789;HRun=0;HaplotypeScore=137.5039;InbreedingCoeff=0.2613;MQ=62.20;MQ0=11;MQRankSum=-0.002;QD=16.54;ReadPosRankSum=2.425;VQSLOD=2.7880;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:57.62:0,58,1316	0/0:11,0:11:28.34:0,28,576	0/0:21,0:18:41.76:0,42,659	0/0:24,0:17:51.07:0,51,881	0/0:20,0:20:6.02:0,6,99	0/0:28,0:28:29.59:0,30,565	0/0:20,0:20:46.10:0,46,1250	1/1:21,0:19:12.14:681,12,0	0/0:21,0:21:51.16:0,51,1238	0/1:21,0:20:99:356,0,162	0/0:13,0:13:1.57:0,2,17	0/0:16,0:16:36.10:0,36,738	0/0:24,0:24:27.04:0,27,709	0/0:17,0:17:8.40:0,8,171	0/0:18,0:18:18.53:0,19,439	1/1:3,16:18:12.04:356,12,0	0/1:22,0:21:33.27:37,0,33	0/1:13,0:13:92.44:344,0,92	0/0:16,0:15:45.15:0,45,1167	0/0:22,0:22:58.12:0,58,1289	0/0:21,0:20:42.14:0,42,1239	0/0:17,0:16:18.05:0,18,303	0/0:15,0:14:27.09:0,27,605	0/0:35,0:33:47.67:0,48,1265	0/0:18,0:18:8.99:0,9,77	0/1:19,0:19:99:384,0,141	0/0:19,0:19:34.05:0,34,783	0/1:9,0:8:16.70:39,0,17
chr10	49407158	.	TGTGTGTAG	T	2637.91	PASS	AB=0.955;AC=14;AF=0.250;AN=56;BaseQRankSum=3.975;DP=548;FS=0.000;HRun=0;HaplotypeScore=121.3807;InbreedingCoeff=0.5474;MQ=66.01;MQ0=11;MQRankSum=1.274;QD=17.70;ReadPosRankSum=1.882;VQSLOD=2.7791;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:60.63:0,61,1164	0/0:12,0:12:30.99:0,31,591	0/0:23,0:20:47.78:0,48,765	0/0:26,0:19:57.09:0,57,989	0/0:18,0:18:6.47:0,6,75	0/0:27,0:27:26.59:0,27,465	0/0:21,0:21:52.10:0,52,1148	1/1:20,0:19:23.50:735,24,0	0/0:21,0:21:48.12:0,48,963	1/1:20,0:19:24.03:514,24,0	1/1:12,0:12:2.99:25,3,0	0/0:16,0:16:36.09:0,36,614	0/0:25,0:25:29.77:0,30,658	0/1:16,0:16:41.35:41,0,64	0/0:19,0:19:21.05:0,21,435	1/1:19,0:18:12.04:246,12,0	0/1:20,0:19:4.82:109,0,5	0/1:11,2:13:41.49:434,0,41	0/0:16,0:15:45.15:0,45,1045	0/0:22,0:22:55.09:0,55,1057	0/0:20,0:19:42.12:0,42,1033	0/0:16,0:15:18.06:0,18,290	0/0:15,0:14:27.09:0,27,546	0/0:34,0:32:45.08:0,45,1038	0/0:18,0:18:2.37:0,2,8	0/1:19,1:20:12.67:589,0,13	0/0:19,0:19:33.58:0,34,705	1/1:8,1:8:6.01:117,6,0
chr10	49407160	.	TGTGTAG	T	2900.87	PASS	AB=0.711;AC=19;AF=0.339;AN=56;BaseQRankSum=4.185;DP=530;FS=0.000;HRun=0;HaplotypeScore=104.4807;InbreedingCoeff=0.7138;MQ=69.34;MQ0=10;MQRankSum=0.307;QD=17.37;ReadPosRankSum=2.466;VQSLOD=3.0993;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:63.13:0,63,1021	0/0:12,0:12:30.99:0,31,539	0/0:24,0:21:50.79:0,51,824	0/0:28,0:21:63.11:0,63,1059	0/1:2,14:16:18.28:18,0,45	0/0:26,0:26:29.56:0,30,465	0/0:21,0:21:48.59:0,49,930	1/1:20,0:19:36.80:749,37,0	0/0:21,0:21:42.11:0,42,760	1/1:2,13:14:36.12:564,36,0	1/1:1,10:11:3.01:69,3,0	0/0:16,0:16:36.10:0,36,557	0/0:25,0:25:29.77:0,30,577	0/1:14,0:14:16.09:25,0,16	0/0:17,0:17:21.03:0,21,371	1/1:19,0:18:12.04:198,12,0	0/1:6,12:17:0.92:127,0,1	1/1:11,1:12:10.51:384,11,0	0/0:16,0:16:48.15:0,48,965	0/0:22,0:22:58.12:0,58,1006	0/0:20,0:19:39.13:0,39,850	0/0:16,0:15:21.05:0,21,292	0/0:15,0:14:27.09:0,27,505	0/0:35,0:33:47.86:0,48,936	1/1:1,14:15:2.90:16,3,0	1/1:18,1:19:54.05:815,54,0	0/0:19,0:19:33.58:0,34,621	1/1:2,6:7:6.02:129,6,0
chr10	49407164	.	TAG	T	2676.86	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=4.552;DP=463;FS=15.127;HRun=0;HaplotypeScore=71.0261;InbreedingCoeff=0.6329;MQ=75.52;MQ0=7;MQRankSum=-0.155;QD=14.47;ReadPosRankSum=-0.182;VQSLOD=1.8753;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:10.38:0,10,748	0/0:11,0:11:30.10:0,30,502	0/0:26,0:23:55.76:0,56,864	0/0:30,0:23:68.16:0,68,1118	0/1:15,0:15:27.66:28,0,45	0/0:18,0:18:32.14:0,32,492	0/0:18,0:18:47.90:0,48,810	1/1:0,20:19:54.65:815,55,0	0/0:15,0:15:36.12:0,36,594	1/1:14,0:13:36.11:518,36,0	1/1:10,0:10:3.01:33,3,0	0/1:16,0:16:31.56:32,0,427	0/0:19,0:19:33.08:0,33,496	1/1:1,11:12:3:28,3,0	0/0:14,0:14:21.07:0,21,347	1/1:18,0:17:12.01:114,12,0	1/1:13,0:13:6.01:67,6,0	1/1:10,0:10:27.07:348,27,0	0/0:15,0:15:45.15:0,45,801	0/0:20,0:20:4.44:0,4,752	0/1:17,0:16:29.43:29,0,453	0/0:15,0:14:18.06:0,18,267	0/0:12,0:11:27.09:0,27,455	0/0:26,0:25:44.89:0,45,708	1/1:15,0:15:3:28,3,0	1/1:17,1:18:54.16:781,54,0	0/0:12,0:12:11.49:0,11,456	1/1:7,0:7:6.01:55,6,0
chr10	49410472	.	AGT	A	2053.07	PASS	AB=0.724;AC=39;AF=0.750;AN=52;BaseQRankSum=1.736;DP=405;FS=1.190;HRun=0;HaplotypeScore=70.3092;InbreedingCoeff=0.6024;MQ=53.32;MQ0=11;MQRankSum=-0.876;QD=8.21;ReadPosRankSum=1.928;VQSLOD=2.9723;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:33.10:0,33,473	1/1:4,3:7:9.02:99,9,0	./.	./.	1/1:6,6:12:11.99:117,12,0	1/1:14,0:21:17.52:85,18,0	1/1:5,0:10:8.52:42,9,0	0/0:23,0:22:2.92:0,3,17	1/1:3,0:10:17.52:84,18,0	1/1:6,1:7:3.01:33,3,0	1/1:3,3:6:6.02:66,6,0	1/1:6,6:14:23.73:225,24,0	1/1:7,2:9:6.02:65,6,0	1/1:7,4:13:13.25:98,13,0	0/1:13,6:21:18.37:178,0,18	1/1:8,0:11:2.84:14,3,0	1/1:14,8:23:22.82:224,23,0	1/1:11,7:17:21.05:231,21,0	0/0:16,0:15:9.87:0,10,89	0/0:6,0:12:6.35:0,6,77	0/0:10,0:13:1.95:0,2,41	1/1:4,6:11:17.88:179,18,0	1/1:2,2:4:6.02:66,6,0	1/1:6,4:13:11.70:94,12,0	1/1:2,1:4:5.05:39,5,0	1/1:11,7:18:15.01:148,15,0	0/0:13,0:20:17.89:0,18,142	1/1:11,4:14:11.53:131,12,0
chr10	49411666	.	TCC	T	3555.15	PASS	AB=0.500;AC=21;AF=0.375;AN=56;BaseQRankSum=0.323;DP=403;FS=0.510;HRun=11;HaplotypeScore=63.4622;InbreedingCoeff=0.8185;MQ=67.01;MQ0=19;MQRankSum=-3.928;QD=25.04;ReadPosRankSum=3.213;VQSLOD=3.5493;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:32.56:0,33,418	0/0:1,0:3:1.55:0,2,4	0/0:54,0:18:25.42:0,25,306	0/0:42,0:14:23.36:0,23,245	1/1:1,6:7:15.01:160,15,0	0/0:15,0:15:18.99:0,19,181	0/0:21,0:21:32.18:0,32,241	1/1:7,28:33:84.04:852,84,0	0/0:6,0:6:5.68:0,6,57	1/1:2,9:11:27.06:286,27,0	1/1:2,7:9:21.05:223,21,0	0/1:0,1:4:9.08:24,0,9	0/0:3,0:7:12.85:0,13,59	1/1:2,16:18:45.11:479,45,0	0/0:2,0:13:20.46:0,20,85	0/0:4,0:13:17.47:0,17,60	1/1:1,18:18:51.13:543,51,0	1/1:2,17:17:39.10:415,39,0	0/0:6,0:11:24.04:0,24,296	0/0:5,0:5:9.03:0,9,116	0/0:9,0:9:9.50:0,10,129	0/0:0,0:2:2.50:0,2,9	0/0:1,0:3:5.51:0,6,53	0/0:4,0:15:27.32:0,27,94	1/1:1,6:7:15.04:160,15,0	1/1:0,9:9:27.07:287,27,0	0/0:2,0:12:15.01:0,15,166	1/1:0,4:4:12.03:128,12,0
chr10	49412668	.	CACA	C	9090.60	PASS	AB=0.967;AC=47;AF=0.839;AN=56;BaseQRankSum=7.937;DP=585;FS=8.238;HRun=0;HaplotypeScore=116.4079;InbreedingCoeff=0.7795;MQ=66.79;MQ0=2;MQRankSum=-1.656;QD=18.63;ReadPosRankSum=3.125;VQSLOD=4.4308;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:63.69:0,64,1228	1/1:3,2:5:3.01:41,3,0	0/1:28,1:24:3.40:3,0,381	0/0:29,0:22:21.05:0,21,316	1/1:8,0:23:33.98:233,34,0	1/1:7,14:21:30.10:413,30,0	1/1:9,10:18:24.08:330,24,0	1/1:13,0:17:11.90:84,12,0	1/1:5,16:21:42.14:578,42,0	1/1:4,0:12:23.81:168,24,0	1/1:8,0:19:32.74:230,33,0	1/1:8,18:26:48.16:661,48,0	1/1:10,21:31:60.20:826,60,0	1/1:9,0:18:26.78:189,27,0	1/1:8,21:29:51.17:702,51,0	0/0:30,1:31:30.93:0,31,1294	1/1:9,0:12:8.96:79,9,0	1/1:4,0:6:5.95:42,6,0	1/1:12,6:17:18.06:242,18,0	1/1:5,20:25:54.18:730,54,0	1/1:11,15:26:39.13:537,39,0	1/1:6,16:22:48.16:652,48,0	1/1:8,17:26:49.27:664,49,0	1/1:8,17:25:41.88:578,42,0	1/1:4,0:19:50.65:382,51,0	1/1:6,0:13:23.81:168,24,0	1/1:7,16:24:42.11:558,42,0	0/0:5,0:5:3:0,3,29
chr10	49412728	.	AAG	A	1072.14	PASS	AB=0.790;AC=8;AF=0.143;AN=56;BaseQRankSum=4.695;DP=684;FS=8.173;HRun=0;HaplotypeScore=202.3313;InbreedingCoeff=-0.1665;MQ=57.69;MQ0=7;MQRankSum=-8.122;QD=6.79;ReadPosRankSum=-7.108;VQSLOD=0.5618;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:78.13:0,78,1515	0/0:8,0:8:24.08:0,24,484	0/0:53,0:32:72.65:0,73,1446	0/0:55,0:32:65.62:0,66,1063	0/0:22,7:29:30.78:0,31,352	0/0:15,0:15:45.15:0,45,891	0/0:18,0:18:54.18:0,54,1069	0/1:11,9:18:64:392,0,64	0/0:26,0:26:69.24:0,69,1390	0/1:22,4:26:99:152,0,432	0/1:16,8:23:99:209,0,169	0/0:24,0:24:66.23:0,66,1332	0/0:30,0:30:87.30:0,87,1754	0/1:26,2:28:63.56:64,0,496	0/0:24,0:24:69.24:0,69,1363	0/0:38,0:38:87.21:0,87,1650	0/1:5,2:7:30.73:31,0,122	0/0:3,0:3:8.99:0,9,92	0/0:12,0:12:36.09:0,36,655	0/0:31,0:31:90.26:0,90,1711	0/0:21,0:21:45.30:0,45,1124	0/0:30,0:30:90.30:0,90,1781	0/0:29,0:29:78.27:0,78,1568	0/0:28,0:28:75.21:0,75,1460	0/1:19,6:24:95:95,0,410	0/1:19,5:24:99:171,0,515	0/0:25,0:25:69.24:0,69,1398	0/1:2,2:4:19.35:95,0,19
chr10	49412739	.	A	AG	2547.85	PASS	AB=0.782;AC=12;AF=0.214;AN=56;BaseQRankSum=11.513;DP=672;FS=2.341;HRun=2;HaplotypeScore=194.5696;InbreedingCoeff=0.0832;MQ=57.39;MQ0=6;MQRankSum=-12.532;QD=12.31;ReadPosRankSum=2.547;VQSLOD=2.8822;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:66.21:0,66,857	0/0:10,0:10:30.10:0,30,385	0/0:47,0:27:63.33:0,63,785	0/0:52,0:30:45.13:0,45,599	0/1:20,9:29:71.64:333,0,72	0/0:16,0:16:48.15:0,48,610	0/0:20,0:20:36.02:0,36,608	0/1:21,9:29:99:312,0,301	0/0:22,0:22:57.17:0,57,725	0/1:21,6:27:99:388,0,207	0/1:19,4:22:99:264,0,165	0/0:27,0:27:69.21:0,69,878	0/0:28,0:28:66.21:0,66,854	0/1:27,4:31:99:355,0,129	0/0:22,0:22:57.18:0,57,736	0/0:35,0:35:69.22:0,69,895	0/1:6,3:9:80.35:80,0,90	1/1:0,3:3:9.03:122,9,0	0/0:9,0:9:27.09:0,27,351	0/0:19,0:19:57.19:0,57,740	0/0:19,0:19:46.20:0,46,554	0/0:30,0:30:81.25:0,81,1036	0/0:32,0:32:84.27:0,84,1091	0/0:28,0:28:69.22:0,69,893	0/1:14,11:24:98.79:425,0,99	0/1:15,10:25:99:393,0,157	0/0:26,0:26:60.19:0,60,779	1/1:4,0:4:3.51:31,4,0
chr10	49412740	.	G	GGAGGAAGAA	15970.85	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=2.557;DP=664;FS=8.660;HRun=0;HaplotypeScore=239.8284;InbreedingCoeff=0.9836;MQ=56.36;MQ0=6;MQRankSum=-16.230;QD=79.06;ReadPosRankSum=-3.634;VQSLOD=2.9299;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:69.22:0,69,1959	0/0:10,0:10:30.03:0,30,805	0/0:46,0:26:64.43:0,64,1494	0/0:50,0:28:49.43:0,49,1175	1/1:20,8:28:55.94:1692,56,0	0/0:16,0:16:48.16:0,48,1303	0/0:18,0:20:31.48:0,31,1369	1/1:29,0:28:76.57:1734,77,0	0/0:24,0:24:48.57:0,49,1625	1/1:16,8:25:69.23:2320,69,0	1/1:15,7:21:59.79:1879,60,0	0/0:27,0:27:51.84:0,52,1816	0/0:25,0:25:66.16:0,66,1868	1/1:12,18:30:78.25:2755,78,0	0/0:22,0:22:57.12:0,57,1594	0/0:35,0:35:69.24:0,69,1977	1/1:8,1:9:11.62:623,12,0	1/1:3,0:3:9.03:278,9,0	0/0:9,0:9:27.09:0,27,769	0/0:19,0:19:57.20:0,57,1733	0/0:19,0:19:40.35:0,40,1155	0/0:31,0:31:72.65:0,73,2464	0/0:33,0:33:84.76:0,85,2222	0/0:28,0:28:68.12:0,68,1898	1/1:19,5:22:57.19:1786,57,0	1/1:21,4:25:71.47:2385,71,0	0/0:25,0:25:50.62:0,51,1582	1/1:4,2:6:15.05:519,15,0
chr10	49412756	.	A	AAG	469.39	PASS	AB=0.900;AC=10;AF=0.179;AN=56;BaseQRankSum=6.975;DP=675;FS=0.601;HRun=0;HaplotypeScore=237.1535;InbreedingCoeff=-0.0272;MQ=50.06;MQ0=10;MQRankSum=-7.280;QD=2.43;ReadPosRankSum=-7.283;VQSLOD=0.0856;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:63.17:0,63,933	0/0:11,0:11:22.26:0,22,406	0/0:45,0:19:30.86:0,31,500	0/0:42,0:22:44.21:0,44,623	0/1:29,1:28:16.51:17,0,340	0/0:22,0:22:53.65:0,54,780	0/0:19,0:19:51.13:0,51,753	0/1:35,1:32:94.31:94,0,781	0/0:25,0:25:49.03:0,49,870	0/1:26,2:27:33.14:33,0,551	0/1:21,2:23:92.65:93,0,431	0/0:28,0:28:48.07:0,48,957	0/0:26,0:26:53.35:0,53,896	0/0:27,0:27:41.50:0,41,348	0/0:21,0:21:46.82:0,47,827	0/0:33,0:33:60.19:0,60,899	0/1:8,4:12:73.53:74,0,141	1/1:1,0:1:3.01:37,3,0	0/0:17,0:16:43.41:0,43,675	0/0:29,0:29:69.40:0,69,1034	0/1:12,0:13:2.32:2,0,436	0/0:30,0:29:84.26:0,84,1207	0/0:27,0:27:49.78:0,50,1071	0/0:24,0:24:57.19:0,57,871	0/1:20,3:21:99:101,0,310	0/1:22,5:26:99:158,0,549	0/0:24,0:24:59.92:0,60,914	0/0:7,0:7:17.44:0,17,179
chr10	49412772	.	GGA	G	1006.14	PASS	AB=0.899;AC=16;AF=0.286;AN=56;BaseQRankSum=9.467;DP=682;FS=3.779;HRun=0;HaplotypeScore=273.1370;InbreedingCoeff=-0.2372;MQ=40.64;MQ0=10;MQRankSum=-9.382;QD=2.60;ReadPosRankSum=-8.100;VQSLOD=0.3648;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:69.24:0,69,1378	0/0:11,0:11:27.46:0,27,527	0/0:36,0:8:17.84:0,18,281	0/0:30,1:12:33.09:0,33,613	0/1:27,2:27:92.59:93,0,1054	0/0:24,0:24:29.47:0,29,971	0/1:18,6:23:15.77:16,0,814	0/0:34,0:32:89.38:0,89,1750	0/0:25,0:25:58.19:0,58,1109	0/1:32,5:36:99:162,0,1263	0/1:23,2:25:90.78:91,0,927	0/0:21,1:22:24.85:0,25,917	0/1:24,6:30:99:141,0,875	0/1:24,3:27:23.03:23,0,1264	0/1:19,7:26:99:151,0,875	0/1:33,1:35:20.53:21,0,728	0/1:12,0:12:42.76:43,0,221	1/1:1,2:3:5.81:93,6,0	0/0:15,0:14:32.70:0,33,775	0/0:25,0:25:64.47:0,64,1126	0/0:12,1:13:19.98:0,20,483	0/1:26,3:29:99:115,0,1079	0/1:25,5:30:71.91:72,0,1171	0/1:23,1:24:1.78:2,0,972	0/1:20,3:22:87.05:87,0,594	0/1:30,2:30:56.73:57,0,1004	0/0:28,0:28:65.46:0,65,1341	0/0:7,0:7:21.07:0,21,413
chr10	49412778	.	AAG	A	1673.60	PASS	AB=0.936;AC=24;AF=0.429;AN=56;BaseQRankSum=8.093;DP=670;FS=16.916;HRun=0;HaplotypeScore=268.5379;InbreedingCoeff=-0.5736;MQ=40.02;MQ0=11;MQRankSum=-8.156;QD=3.02;ReadPosRankSum=-8.835;VQSLOD=-0.4001;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:72.23:0,72,1256	0/1:9,1:10:11.41:11,0,404	0/0:36,0:7:15.05:0,15,231	0/0:33,0:12:27.08:0,27,449	0/1:28,1:27:80.14:80,0,773	0/1:24,0:24:74.61:75,0,425	0/1:19,6:24:54.98:55,0,512	0/1:33,2:33:2.33:2,0,1277	0/1:26,0:26:16.77:17,0,621	0/1:33,3:35:99:182,0,1135	0/1:21,4:25:99:149,0,675	0/1:22,0:22:6.12:6,0,746	0/1:26,4:30:99:242,0,680	0/1:25,1:26:4.15:4,0,949	0/1:25,2:27:99:124,0,733	0/1:33,1:34:99:188,0,304	0/1:10,0:10:50.69:51,0,185	1/1:2,0:2:6.01:55,6,0	0/0:13,0:12:15.43:0,15,349	0/1:24,0:24:14.52:15,0,578	0/1:11,1:12:44.80:45,0,192	0/1:23,3:25:99:102,0,596	0/1:26,2:28:87.21:87,0,870	0/1:22,2:24:31.57:32,0,665	0/1:18,4:21:99:200,0,436	0/1:27,3:28:83.95:84,0,893	0/1:28,0:28:26.36:26,0,783	0/0:7,0:7:21.07:0,21,335
chr10	49412780	.	G	GAA	5569.91	PASS	AB=0.865;AC=26;AF=0.464;AN=56;BaseQRankSum=6.590;DP=667;FS=8.644;HRun=3;HaplotypeScore=256.1123;InbreedingCoeff=-0.7406;MQ=38.63;MQ0=11;MQRankSum=-9.416;QD=9.69;ReadPosRankSum=0.075;VQSLOD=0.3730;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:78.13:0,78,1105	0/1:10,0:10:49.17:49,0,192	0/0:34,0:6:15.04:0,15,212	0/0:31,0:10:27.08:0,27,385	0/1:28,3:29:99:298,0,465	0/1:13,0:24:76.73:247,0,77	0/1:20,0:24:99:137,0,192	0/1:37,0:35:85.17:85,0,848	0/1:17,0:26:99:216,0,152	0/1:30,6:35:99:422,0,598	0/1:22,3:25:99:294,0,297	0/1:16,1:23:99:154,0,199	0/1:21,7:30:99:571,0,226	0/1:23,3:26:67.14:67,0,638	0/1:17,8:27:99:371,0,278	0/1:11,1:32:98.46:430,0,98	0/1:10,0:12:54.06:54,0,116	1/1:0,2:2:6.02:111,6,0	0/1:10,0:11:62.22:62,0,248	0/1:13,0:24:80.44:311,0,80	0/1:8,0:11:25.68:26,0,85	0/1:17,4:23:99:295,0,300	0/1:20,5:28:99:309,0,226	0/1:20,1:23:74.10:74,0,364	0/1:16,4:19:99:378,0,227	0/1:29,3:30:99:306,0,455	0/1:16,0:28:99:283,0,192	0/1:7,0:7:20.35:20,0,119
chr10	49412793	.	AG	A	4636.99	PASS	AB=0.839;AC=29;AF=0.518;AN=56;BaseQRankSum=1.451;DP=636;FS=4.431;HRun=2;HaplotypeScore=250.6460;InbreedingCoeff=-0.4609;MQ=38.97;MQ0=7;MQRankSum=0.923;QD=8.25;ReadPosRankSum=0.234;VQSLOD=2.2096;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:75.25:0,75,1120	0/1:7,3:10:0.56:134,0,1	0/0:27,0:6:12.04:0,12,166	0/0:22,0:7:18.05:0,18,251	0/1:22,9:29:34.19:146,0,34	0/1:29,1:30:99:144,0,252	0/1:24,2:24:99:124,0,106	0/1:11,15:24:79.03:519,0,79	0/1:21,1:22:51.14:115,0,51	1/1:21,13:33:23.89:467,24,0	0/1:16,9:25:41.64:251,0,42	1/1:19,4:23:24.59:363,25,0	0/1:22,10:32:99:189,0,198	0/1:9,11:20:24.62:244,0,25	0/1:21,8:29:99:258,0,116	0/1:33,0:33:43.33:43,0,103	0/1:9,4:13:31.03:137,0,31	1/1:2,0:2:2.13:5,2,0	0/1:9,0:9:19.64:20,0,212	0/1:25,1:26:43.86:44,0,144	0/1:13,0:13:27.56:28,0,72	0/1:16,5:20:90.26:171,0,90	0/1:23,5:28:99:337,0,102	0/1:16,5:21:29.77:214,0,30	0/1:12,7:18:12.46:134,0,12	0/1:23,10:31:0.62:314,0,1	0/1:28,1:29:94.18:94,0,125	1/1:3,4:7:20.75:140,21,0
chr10	49412794	.	G	GAAA	12756.90	PASS	AB=0.978;AC=44;AF=0.786;AN=56;BaseQRankSum=5.912;DP=634;FS=2.458;HRun=3;HaplotypeScore=244.9483;InbreedingCoeff=0.2694;MQ=39.07;MQ0=7;MQRankSum=-4.165;QD=22.66;ReadPosRankSum=7.387;VQSLOD=1.8748;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:75.26:0,75,1370	1/1:9,1:10:25.28:229,25,0	0/0:26,0:5:12.04:0,12,177	0/0:20,0:6:18.05:0,18,305	1/1:20,10:28:6.75:708,7,0	0/1:30,0:30:99:321,0,166	1/1:26,0:24:5.63:259,6,0	0/1:26,0:24:56.77:802,0,57	1/1:21,0:21:38.73:454,39,0	1/1:26,8:33:76.72:1407,77,0	1/1:20,5:25:33.92:852,34,0	1/1:23,0:23:57.22:565,57,0	1/1:28,4:32:72.55:624,73,0	1/1:18,2:20:11.70:624,12,0	1/1:30,1:31:72.58:628,73,0	1/1:32,0:32:3.08:355,3,0	0/1:11,2:13:44.53:231,0,45	1/1:2,0:2:6.02:107,6,0	0/1:9,0:9:69.15:69,0,195	0/1:26,0:26:38.46:415,0,38	0/1:13,0:13:61:61,0,67	1/1:21,0:20:54.12:470,54,0	1/1:29,1:30:64.05:718,64,0	1/1:22,0:22:45.25:362,45,0	1/1:15,4:18:53.44:643,53,0	1/1:23,10:31:29.85:1075,30,0	1/1:27,1:28:3.35:413,3,0	1/1:4,3:7:21.03:365,21,0
chr10	49412798	.	A	AGAAG	9142.26	PASS	AB=0.994;AC=43;AF=0.796;AN=54;BaseQRankSum=2.346;DP=631;FS=0.601;HRun=0;HaplotypeScore=273.5766;InbreedingCoeff=0.3285;MQ=39.38;MQ0=5;MQRankSum=-3.209;QD=16.87;ReadPosRankSum=4.442;VQSLOD=3.9389;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:48.13:0,48,711	1/1:7,0:9:12.04:247,12,0	0/0:21,0:6:9.02:0,9,121	0/0:19,0:7:2.90:0,3,16	0/1:30,0:29:7.72:275,0,8	1/1:29,0:29:44.59:264,45,0	1/1:26,0:24:30.67:208,31,0	./.	1/1:20,0:20:30.70:272,31,0	0/1:34,0:33:19.36:374,0,19	1/1:24,0:24:14.34:321,14,0	1/1:22,0:22:30.78:208,31,0	1/1:25,7:36:75.81:1423,76,0	0/1:21,0:21:13.60:123,0,14	1/1:23,7:31:57.05:1084,57,0	1/1:28,0:33:62.82:737,63,0	0/1:14,0:14:13.32:100,0,13	1/1:2,0:2:6.01:55,6,0	1/1:12,0:12:12.48:74,12,0	1/1:25,0:25:18.68:214,19,0	1/1:13,0:13:6.89:64,7,0	1/1:16,3:19:36:647,36,0	1/1:25,5:31:56.66:901,57,0	1/1:19,0:21:20.43:391,20,0	1/1:20,0:19:29.28:262,29,0	0/1:33,0:31:25.34:385,0,25	1/1:28,0:28:55.68:382,56,0	1/1:7,0:8:9.03:130,9,0
chr10	49412799	.	G	GA	3630.46	PASS	AB=0.756;AC=22;AF=0.393;AN=56;BaseQRankSum=5.467;DP=640;FS=0.350;HRun=3;HaplotypeScore=258.3732;InbreedingCoeff=0.0314;MQ=39.57;MQ0=5;MQRankSum=-6.456;QD=9.53;ReadPosRankSum=3.891;VQSLOD=1.2873;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:78.22:0,78,952	0/1:6,3:9:13.10:101,0,13	0/0:22,0:6:12.03:0,12,147	0/0:20,0:7:21.01:0,21,224	0/1:15,16:29:96.19:232,0,96	0/0:29,0:29:85.89:0,86,773	0/0:26,0:24:56.15:0,56,481	0/1:13,9:20:86.26:222,0,86	0/0:21,0:21:51.47:0,51,390	1/1:18,16:33:0.35:476,0,0	0/1:14,10:24:54.27:218,0,54	0/1:19,4:23:87.65:293,0,88	0/1:30,6:36:50.28:163,0,50	0/1:13,8:21:30.26:124,0,30	0/1:26,6:32:6.58:205,0,7	0/0:34,0:34:50.81:0,51,407	0/1:10,4:14:73.15:91,0,73	1/1:2,0:2:5.92:39,6,0	0/0:14,0:14:33.73:0,34,324	0/0:25,0:25:70.48:0,70,582	0/0:14,0:14:2.17:0,2,196	1/1:17,3:20:19.35:164,19,0	0/1:26,5:31:21.15:342,0,21	1/1:20,2:22:20.38:194,20,0	0/1:11,9:19:39.02:155,0,39	0/1:15,18:31:35.95:447,0,36	0/0:28,0:28:74.49:0,74,605	1/1:2,5:7:17.93:167,18,0
chr10	49412806	.	G	GGAAA	6346.32	PASS	AB=0.954;AC=21;AF=0.375;AN=56;BaseQRankSum=8.698;DP=632;FS=0.000;HRun=0;HaplotypeScore=265.5519;InbreedingCoeff=-0.3901;MQ=41.27;MQ0=4;MQRankSum=-4.118;QD=14.66;ReadPosRankSum=9.654;VQSLOD=2.6465;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:72.04:0,72,1078	0/1:8,0:8:4.03:168,0,4	0/0:21,0:7:18.01:0,18,247	0/0:21,0:9:26.93:0,27,243	0/1:26,4:28:39.44:410,0,39	0/0:30,0:30:53.92:0,54,366	0/0:27,0:25:7.67:0,8,191	0/1:19,0:18:51.78:52,0,123	0/1:21,0:21:35.58:36,0,152	0/1:26,3:28:43.93:582,0,44	0/1:19,2:21:10.51:423,0,11	0/1:24,0:24:56.19:56,0,67	0/1:36,0:37:40.49:869,0,40	0/1:17,0:17:60.95:187,0,61	0/1:30,0:30:38.82:638,0,39	0/1:37,0:37:99:280,0,133	0/1:13,2:15:31:194,0,31	1/1:4,0:4:5.62:99,6,0	0/0:16,0:16:30.50:0,31,219	0/0:27,0:27:28.39:0,28,309	0/1:13,0:13:5.89:6,0,122	0/1:17,0:17:1.45:393,0,1	0/1:32,0:32:24.81:514,0,25	0/1:21,0:21:26.23:209,0,26	0/1:16,3:18:20.16:439,0,20	0/1:25,7:30:85.82:616,0,86	0/0:30,0:30:10.79:0,11,200	0/1:6,1:7:28.29:175,0,28
chr10	49412824	.	AAGGAAGG	A	5239.34	PASS	AB=0.970;AC=12;AF=0.214;AN=56;BaseQRankSum=-2.253;DP=639;FS=0.000;HRun=0;HaplotypeScore=288.8111;InbreedingCoeff=0.1859;MQ=52.09;MQ0=2;MQRankSum=-0.949;QD=25.56;ReadPosRankSum=3.193;VQSLOD=3.7466;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:84.28:0,84,2499	0/0:8,0:8:21.06:0,21,456	0/0:20,0:12:36.11:0,36,703	0/0:17,0:11:33.11:0,33,537	0/1:21,10:29:99:769,0,216	0/0:33,0:33:97.56:0,98,2204	0/0:25,0:23:57.12:0,57,1353	0/1:25,0:24:4.61:770,0,5	0/0:18,0:18:51.64:0,52,1236	0/1:30,0:29:99:628,0,488	0/1:23,0:23:99:619,0,305	0/0:21,0:21:60.16:0,60,1326	0/0:38,0:38:99:0,114,2677	0/1:16,0:16:99:416,0,374	0/0:25,0:25:72.25:0,72,1737	0/0:35,0:35:99:0,99,2552	1/1:15,0:15:29.47:511,29,0	1/1:6,0:6:15:185,15,0	0/0:18,0:18:54.05:0,54,757	0/0:25,0:25:66.48:0,66,1626	0/0:16,0:16:40.93:0,41,688	0/0:20,0:20:57.19:0,57,1241	0/0:31,0:31:87.13:0,87,1846	0/0:22,0:22:52.97:0,53,936	0/1:22,0:21:99:670,0,108	0/1:29,0:27:99:543,0,287	0/0:34,0:34:99:0,99,2241	0/1:8,0:8:99:128,0,219
chr10	49412828	.	AAGG	A	5132.96	PASS	AB=0.846;AC=14;AF=0.250;AN=56;BaseQRankSum=0.616;DP=641;FS=1.102;HRun=0;HaplotypeScore=234.7620;InbreedingCoeff=0.3969;MQ=55.51;MQ0=0;MQRankSum=-2.628;QD=24.80;ReadPosRankSum=2.741;VQSLOD=4.4032;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:84.28:0,84,1619	0/0:8,0:8:24.07:0,24,362	0/0:21,0:15:42.13:0,42,634	0/0:14,0:11:33.10:0,33,418	0/1:27,2:27:74.21:729,0,74	0/0:32,0:32:91.64:0,92,1523	0/0:26,0:24:63.14:0,63,1043	1/1:27,0:25:66.15:920,66,0	0/0:18,0:18:51.12:0,51,859	0/1:26,4:29:99:691,0,199	0/1:10,13:23:99:546,0,127	0/0:22,0:22:61.42:0,61,929	0/0:38,0:38:99:0,111,1771	0/1:14,2:16:99:302,0,130	0/0:25,0:25:75.23:0,75,1219	0/0:34,0:34:99:0,99,1736	1/1:14,1:15:40.33:458,40,0	1/1:7,0:7:15.05:193,15,0	0/0:20,0:20:55.19:0,55,637	0/0:23,0:23:64.09:0,64,1103	0/0:19,0:19:40.75:0,41,632	0/0:19,0:19:54.15:0,54,836	0/0:32,0:32:91.97:0,92,1316	0/0:22,0:22:53.20:0,53,686	1/1:18,5:22:5.45:577,5,0	0/1:17,10:25:82.52:543,0,83	0/0:33,0:33:95.37:0,95,1514	0/1:10,0:10:90.62:173,0,91
chr10	49412831	.	G	GA	6379.01	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=3.106;DP=639;FS=3.149;HRun=2;HaplotypeScore=203.2720;InbreedingCoeff=0.9922;MQ=58.74;MQ0=0;MQRankSum=-4.338;QD=31.42;ReadPosRankSum=0.409;VQSLOD=4.1868;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:84.22:0,84,1007	0/0:7,0:7:12.65:0,13,111	0/0:22,0:17:41.80:0,42,494	0/0:13,0:12:35.90:0,36,416	1/1:18,10:26:47.35:908,47,0	0/0:32,0:32:72.21:0,72,863	0/0:28,0:26:53.98:0,54,603	1/1:2,24:25:69.22:949,69,0	0/0:18,0:18:35.35:0,35,373	1/1:12,17:28:59.50:851,60,0	1/1:17,5:22:40.44:658,40,0	0/0:22,0:22:35.44:0,35,394	0/0:38,0:38:57.43:0,57,592	1/1:6,8:14:28.90:366,29,0	0/0:27,0:27:29.04:0,29,296	0/0:33,0:33:66.96:0,67,669	1/1:1,13:14:42.13:559,42,0	1/1:0,8:8:15.05:213,15,0	0/0:18,0:18:45.05:0,45,509	0/0:22,0:22:45.14:0,45,545	0/0:19,0:19:37.02:0,37,481	0/0:21,0:21:27.34:0,27,279	0/0:32,0:32:59.06:0,59,620	0/0:23,0:23:37.58:0,38,406	1/1:8,15:22:54.18:748,54,0	1/1:15,12:25:60.15:804,60,0	0/0:32,0:32:71.80:0,72,841	1/1:3,9:12:19.14:324,19,0
chr10	49414877	.	C	CT	5197.75	PASS	AB=0.831;AC=21;AF=0.375;AN=56;BaseQRankSum=-12.523;DP=564;FS=1.550;HRun=10;HaplotypeScore=57.5619;InbreedingCoeff=0.7667;MQ=71.71;MQ0=0;MQRankSum=-0.669;QD=18.97;ReadPosRankSum=-0.936;VQSLOD=5.3404;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:56.87:0,57,460	0/0:7,0:7:20.95:0,21,167	0/0:11,0:11:4.81:0,5,115	0/0:12,0:11:19.36:0,19,152	1/1:5,30:36:90.02:929,90,0	0/0:19,1:21:20.97:0,21,368	0/1:11,1:13:6.01:6,0,152	1/1:11,26:37:34.89:767,35,0	0/0:18,0:19:46.97:0,47,372	1/1:4,21:25:60.13:630,60,0	1/1:3,20:24:41.27:604,41,0	0/0:21,0:21:56.92:0,57,468	0/0:26,0:26:65.87:0,66,541	1/1:2,12:14:30.08:320,30,0	0/0:21,0:21:53.91:0,54,443	0/0:17,0:17:35.94:0,36,296	0/1:8,15:23:69.08:362,0,69	1/1:3,22:25:35.51:583,36,0	0/1:20,1:23:10.36:10,0,262	0/0:28,0:28:53.89:0,54,443	0/0:10,0:10:26.97:0,27,222	0/0:20,0:22:61:0,61,480	0/0:16,0:16:41.94:0,42,345	0/0:8,0:8:23.97:0,24,197	1/1:3,12:15:30.55:321,31,0	1/1:12,18:30:52.35:537,52,0	0/0:30,0:30:56.70:0,57,616	1/1:5,4:9:12.03:128,12,0
chr10	49415115	.	G	GT	1831.20	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-6.778;DP=624;FS=0.502;HRun=8;HaplotypeScore=105.6647;InbreedingCoeff=0.9875;MQ=79.90;MQ0=0;MQRankSum=-2.656;QD=26.93;ReadPosRankSum=1.329;VQSLOD=3.2311;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:69.01:0,69,621	0/0:8,0:8:23.98:0,24,209	0/0:13,0:13:20.97:0,21,184	0/0:25,0:25:37.01:0,37,522	0/0:28,0:28:78.50:0,79,710	1/1:1,22:23:66.16:748,66,0	1/1:5,11:16:11.64:377,12,0	0/0:42,0:42:99:0,103,930	1/1:2,11:13:36.11:414,36,0	0/0:25,0:25:69.04:0,69,631	0/0:39,0:39:99:0,109,988	0/0:25,0:25:63.02:0,63,576	0/0:20,0:20:48.02:0,48,439	0/0:15,0:15:33:0,33,298	0/0:19,0:19:42.01:0,42,384	1/1:4,12:16:39.12:449,39,0	0/0:24,0:24:66.03:0,66,602	0/0:17,0:17:39.02:0,39,357	0/0:26,0:26:69.03:0,69,629	0/0:34,0:34:99:0,99,906	0/0:15,0:15:39:0,39,352	0/0:13,0:13:36.02:0,36,329	0/0:19,0:19:45.02:0,45,412	0/0:26,0:26:69.04:0,69,631	0/0:20,0:20:57.50:0,58,522	0/0:35,0:35:96.04:0,96,877	0/0:36,0:36:93.03:0,93,846	0/0:8,0:8:21.01:0,21,192
chr10	49415167	.	CTT	C	6648.88	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=8.883;DP=685;FS=1.046;HRun=11;HaplotypeScore=144.0846;InbreedingCoeff=0.9543;MQ=85.83;MQ0=5;MQRankSum=-2.219;QD=25.19;ReadPosRankSum=0.634;VQSLOD=3.4192;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:54.17:0,54,807	0/0:6,0:7:20.56:0,21,286	0/0:56,1:34:1.76:0,2,493	0/0:46,0:29:17.13:0,17,150	1/1:1,41:42:99:1274,120,0	0/0:2,0:21:60.10:0,60,589	0/0:3,0:16:39.07:0,39,391	1/1:4,37:42:99:1124,105,0	0/0:1,0:9:24.04:0,24,239	1/1:7,21:28:60.04:622,60,0	1/1:6,25:31:59.38:663,59,0	0/0:1,0:15:30.05:0,30,305	0/0:8,1:23:24.69:0,25,459	1/1:1,17:18:42.10:447,42,0	0/0:24,0:24:60.20:0,60,924	0/0:2,0:14:38.10:0,38,351	1/1:3,17:20:45.10:479,45,0	1/1:2,19:21:48.11:510,48,0	0/0:5,1:21:7.36:0,7,111	0/0:5,1:35:40.30:0,40,205	0/0:2,0:14:24.95:0,25,86	0/0:3,0:15:39.07:0,39,401	0/0:4,0:21:44.57:0,45,428	0/0:7,0:28:72.60:0,73,734	1/1:3,15:18:45.09:477,45,0	1/1:4,20:24:60.14:639,60,0	0/0:4,0:32:45.67:0,46,176	1/1:4,16:20:39.09:415,39,0
chr10	49415566	.	A	AG	9691.01	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=21.426;DP=752;FS=0.899;HRun=0;HaplotypeScore=130.9512;InbreedingCoeff=0.9240;MQ=86.68;MQ0=0;MQRankSum=-3.384;QD=23.81;ReadPosRankSum=3.158;VQSLOD=5.6587;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:81.27:0,81,1133	1/1:12,0:12:17.73:46,18,0	0/0:26,0:26:70.94:0,71,943	0/0:24,1:25:62.01:0,62,829	0/0:22,0:22:66.22:0,66,921	1/1:0,24:24:66.22:986,66,0	1/1:0,16:16:45.15:675,45,0	0/0:27,0:27:78.26:0,78,1091	1/1:0,31:31:90.30:1336,90,0	0/0:31,0:31:90.30:0,90,1259	0/0:31,0:31:93.31:0,93,1301	0/1:29,0:29:11.85:53,0,12	1/1:37,0:37:51.84:153,52,0	0/0:33,0:33:99:0,99,1384	1/1:30,0:30:38.74:117,39,0	1/1:0,33:33:90.30:1342,90,0	0/0:33,0:33:96.29:0,96,1322	0/0:19,0:19:57.19:0,57,796	1/1:0,23:23:66.22:983,66,0	1/1:1,37:38:99:1650,111,0	1/1:0,24:24:60.20:894,60,0	1/1:27,0:27:38.23:145,38,0	1/1:27,0:27:18.07:93,18,0	1/1:27,0:27:9.93:49,10,0	0/0:18,0:18:51.17:0,51,713	0/0:26,0:26:75.25:0,75,1049	1/1:1,28:29:78.23:1172,78,0	0/0:27,0:27:78.26:0,78,1088
chr10	49415567	.	C	CG	17457.74	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=11.489;DP=748;FS=0.000;HRun=0;HaplotypeScore=101.3776;InbreedingCoeff=1.0000;MQ=87.76;MQ0=0;MQRankSum=-0.974;QD=43.43;ReadPosRankSum=2.757;VQSLOD=4.7252;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:81.27:0,81,1133	1/1:0,12:12:36.12:575,36,0	0/0:27,0:27:70.94:0,71,952	0/0:26,0:26:63.20:0,63,855	0/0:22,0:22:66.20:0,66,904	1/1:23,0:23:66.22:989,66,0	1/1:16,0:16:45.15:673,45,0	0/0:27,0:27:81.26:0,81,1117	1/1:31,0:31:93.28:1370,93,0	0/0:31,0:31:93.30:0,93,1286	0/0:31,0:31:93.31:0,93,1300	1/1:2,27:29:81.28:1289,81,0	1/1:0,34:34:99:1579,99,0	0/0:33,0:33:99:0,99,1380	1/1:1,29:30:81.28:1290,81,0	1/1:33,0:33:93.31:1384,93,0	0/0:33,0:33:99:0,99,1366	0/0:19,0:19:57.19:0,57,797	1/1:24,0:24:66.22:990,66,0	1/1:39,0:39:99:1660,114,0	1/1:23,0:23:60.20:897,60,0	1/1:1,26:27:78.27:1238,78,0	1/1:0,26:26:72.25:1150,72,0	1/1:0,26:26:75.26:1198,75,0	0/0:17,0:17:51.17:0,51,713	0/0:27,0:27:78.25:0,78,1077	1/1:29,0:29:81.22:1177,81,0	0/0:26,0:26:78.26:0,78,1088
chr10	49419612	.	A	ACG	342.47	PASS	AB=0.871;AC=9;AF=0.161;AN=56;BaseQRankSum=5.346;DP=737;FS=0.000;HRun=0;HaplotypeScore=153.2830;InbreedingCoeff=-0.0834;MQ=52.70;MQ0=13;MQRankSum=-1.647;QD=1.54;ReadPosRankSum=2.890;VQSLOD=2.5293;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:47:95.47:0,95,833	0/0:11,0:11:10.19:0,10,87	0/0:27,0:12:30.02:0,30,284	0/0:28,0:18:44.82:0,45,418	0/1:19,0:19:25.14:25,0,69	0/0:26,0:26:15.59:0,16,139	0/0:30,0:29:22.77:0,23,181	0/0:23,0:21:55.58:0,56,410	0/0:29,0:29:11.57:0,12,174	0/0:25,0:25:61.20:0,61,473	0/0:18,0:18:40.33:0,40,307	0/1:11,0:28:28.89:29,0,55	0/1:31,0:29:11.01:82,0,11	0/0:34,0:34:35.09:0,35,484	0/0:28,0:28:59.57:0,60,551	0/0:26,0:26:71.93:0,72,798	0/0:40,0:40:99:0,101,904	0/0:22,0:22:36.13:0,36,490	0/1:15,0:15:67.29:98,0,67	0/1:14,0:14:5.61:6,0,12	0/1:31,32:61:90.83:91,0,346	0/0:22,0:22:17.97:0,18,147	0/1:11,0:11:0:0,0,0	0/0:39,0:39:2.43:0,2,23	0/1:21,0:21:7.13:7,0,356	0/0:28,0:27:22.95:0,23,402	0/1:4,16:20:55.52:134,0,56	0/0:12,0:12:32.89:0,33,316
chr10	49419614	.	A	ACG	290.51	PASS	AB=0.903;AC=13;AF=0.232;AN=56;BaseQRankSum=0.006;DP=723;FS=12.289;HRun=0;HaplotypeScore=158.1201;InbreedingCoeff=0.2644;MQ=54.76;MQ0=13;MQRankSum=0.170;QD=1.17;ReadPosRankSum=-2.280;VQSLOD=1.4672;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,101,879	0/0:11,0:11:10.19:0,10,87	0/0:28,0:14:41.99:0,42,414	0/0:29,0:19:54.02:0,54,530	1/1:19,0:19:2.46:33,2,0	0/0:26,0:26:15.59:0,16,138	0/0:28,0:27:14.02:0,14,110	0/1:21,0:19:6.97:7,0,140	0/0:28,0:28:20.28:0,20,167	0/0:24,0:24:28.68:0,29,221	0/0:17,0:17:31.73:0,32,206	1/1:22,2:25:8.88:92,9,0	0/1:19,10:28:32.92:33,0,62	0/0:32,0:32:16.26:0,16,268	0/0:29,0:29:62.54:0,63,573	0/0:26,0:26:70.52:0,71,783	0/0:38,0:38:11.26:0,11,332	0/0:23,0:23:34.71:0,35,267	0/0:15,0:15:29.26:0,29,160	1/1:14,1:15:7.98:46,8,0	0/1:60,0:58:44.49:120,0,44	0/0:21,0:21:14.94:0,15,117	0/1:3,7:10:0:0,0,0	0/0:26,12:38:5.17:0,5,31	0/1:21,0:21:71.76:72,0,131	0/1:27,0:26:9.91:10,0,204	0/1:20,0:20:21.03:28,0,21	0/0:13,0:13:31.72:0,32,178
chr10	49419616	.	A	ACG	2693.54	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=4.403;DP=694;FS=33.709;HRun=0;HaplotypeScore=142.6495;InbreedingCoeff=0.2904;MQ=54.72;MQ0=12;MQRankSum=0.557;QD=6.08;ReadPosRankSum=2.812;VQSLOD=1.2133;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:98.47:0,98,859	0/0:12,0:12:12.19:0,12,89	0/0:28,0:14:42.06:0,42,423	0/0:29,0:19:46.99:0,47,500	1/1:2,14:16:11.77:166,12,0	0/0:26,0:26:15.59:0,16,139	0/0:28,0:27:11.05:0,11,85	1/1:20,0:18:9.68:234,10,0	0/0:28,0:28:19.69:0,20,136	0/1:22,0:22:34.05:254,0,34	1/1:15,0:15:9.33:209,9,0	1/1:21,0:22:2.55:93,3,0	1/1:28,0:27:9.94:144,10,0	0/1:30,0:30:26.72:213,0,27	0/0:26,0:26:50.55:0,51,466	0/0:26,0:26:65.62:0,66,741	0/1:34,0:34:54.44:305,0,54	0/1:22,0:22:44.44:151,0,44	1/1:16,0:16:3.13:134,3,0	1/1:5,10:15:5.23:21,5,0	0/1:57,0:56:99:152,0,148	0/1:22,0:22:17.30:19,0,17	0/1:9,0:9:0:0,0,0	1/1:35,0:35:8.94:67,9,0	0/1:23,0:23:37.44:118,0,37	1/1:24,0:23:26.75:288,27,0	0/1:19,0:19:5.82:135,0,6	1/1:13,0:13:3.97:174,4,0
chr10	49419620	.	A	ACACG	4650.27	PASS	AB=1.000;AC=43;AF=0.768;AN=56;BaseQRankSum=1.736;DP=705;FS=1.399;HRun=0;HaplotypeScore=166.5412;InbreedingCoeff=0.1798;MQ=59.52;MQ0=10;MQRankSum=-0.348;QD=7.84;ReadPosRankSum=-1.518;VQSLOD=3.6347;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:94.96:0,95,854	1/1:4,8:12:8.74:109,9,0	0/0:29,0:15:38.19:0,38,424	0/0:34,0:24:65.81:0,66,640	1/1:15,0:15:16.71:107,17,0	1/1:8,18:27:10.21:237,10,0	1/1:6,22:29:5.52:124,6,0	1/1:22,0:21:49.28:347,49,0	1/1:10,16:28:8.84:172,9,0	1/1:25,0:25:22.84:364,23,0	1/1:16,0:16:18.33:219,18,0	1/1:25,0:25:17.80:164,18,0	1/1:29,0:28:29.49:196,29,0	0/1:32,0:32:49.88:268,0,50	1/1:23,0:23:7.46:293,7,0	0/1:24,0:24:99:136,0,243	0/1:34,0:34:51.98:320,0,52	0/1:22,0:22:70.84:184,0,71	1/1:18,0:18:4.33:175,4,0	1/1:15,0:15:5.85:103,6,0	0/1:57,0:56:19.66:191,0,20	1/1:17,0:17:2.10:20,2,0	1/1:9,0:9:2.97:20,3,0	1/1:36,0:36:11.65:87,12,0	0/1:19,0:19:45.34:147,0,45	1/1:26,0:25:50.95:394,51,0	1/1:19,0:19:14.26:109,14,0	0/1:13,0:13:37.49:163,0,37
chr10	49420019	.	GAGAAGAAGAAGAAGAAGAAGAAGAAGAAGA	G	1599.88	PASS	AB=1.000;AC=19;AF=0.380;AN=50;BaseQRankSum=1.392;DP=417;FS=10.609;HRun=0;HaplotypeScore=242.3129;InbreedingCoeff=0.3790;MQ=55.26;MQ0=43;MQRankSum=-3.932;QD=13.44;ReadPosRankSum=1.012;VQSLOD=1.3677;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:25:42.14:0,42,3547	0/0:3,0:3:3.01:0,3,162	0/0:45,0:24:26.86:0,27,1184	0/0:41,0:25:12.97:0,13,423	1/1:3,3:5:2.96:19,3,0	0/0:23,0:19:2.14:0,2,1883	0/0:35,0:22:12.04:0,12,680	./.	0/0:10,0:10:18.06:0,18,1314	1/1:8,0:6:8.68:121,9,0	./.	0/1:17,0:13:82.55:83,0,420	0/1:9,0:8:30.84:31,0,191	1/1:14,0:12:24.08:739,24,0	0/0:11,0:10:18.06:0,18,1091	0/0:20,0:20:39.13:0,39,2611	1/1:7,0:7:2.98:22,3,0	1/1:10,0:7:11.98:194,12,0	0/1:10,0:10:15.30:20,0,15	0/0:7,0:9:6.02:0,6,118	0/0:15,0:14:14.76:0,15,188	0/1:19,0:16:29.84:30,0,640	0/1:4,0:2:15.87:16,0,52	0/0:27,0:25:27.51:0,28,638	1/1:7,0:6:6.01:105,6,0	1/1:3,5:7:11.70:390,12,0	0/0:3,0:2:6.02:0,6,154	./.
chr10	49421249	.	TGA	T	3585.98	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=4.386;DP=565;FS=3.198;HRun=0;HaplotypeScore=76.2817;InbreedingCoeff=0.9902;MQ=83.04;MQ0=1;MQRankSum=-4.045;QD=19.70;ReadPosRankSum=0.207;VQSLOD=3.6106;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:48.02:0,48,725	0/0:13,0:13:18.04:0,18,256	0/0:29,0:29:80.66:0,81,1025	0/0:12,0:11:23.73:0,24,328	1/1:5,11:17:27.04:364,27,0	0/0:22,0:22:66.04:0,66,1009	0/0:27,0:27:69.21:0,69,1155	1/1:8,5:13:24.04:275,24,0	0/0:25,0:25:48.10:0,48,711	1/1:5,14:19:35.52:386,36,0	1/1:4,9:14:15.03:184,15,0	0/0:25,0:25:66.16:0,66,1032	0/0:28,0:28:48.65:0,49,870	1/1:6,12:18:23.64:365,24,0	0/0:13,0:13:24.48:0,24,230	0/0:24,0:24:62.95:0,63,921	1/1:6,13:21:27.07:374,27,0	1/1:7,9:16:15.05:228,15,0	0/0:13,0:13:32.60:0,33,348	0/0:19,0:19:20.55:0,21,169	0/0:24,0:23:27:0,27,291	0/0:28,0:28:62.83:0,63,831	0/0:12,0:12:29.87:0,30,333	0/0:28,0:28:63.01:0,63,893	1/1:16,9:25:50.52:578,51,0	1/1:5,14:22:51.05:603,51,0	0/0:16,0:16:27.74:0,28,336	1/1:5,10:15:18.01:229,18,0
chr10	49421250	.	GA	G	1892.09	PASS	AB=0.950;AC=22;AF=0.393;AN=56;BaseQRankSum=8.337;DP=504;FS=1.373;HRun=1;HaplotypeScore=69.6916;InbreedingCoeff=0.8518;MQ=84.85;MQ0=1;MQRankSum=-1.338;QD=10.75;ReadPosRankSum=-0.017;VQSLOD=1.4538;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:47.50:0,47,600	0/1:8,1:9:3.93:4,0,169	0/0:28,0:28:73.68:0,74,869	0/0:11,0:11:23.72:0,24,269	1/1:12,1:13:26.76:186,27,0	0/0:24,0:24:62.48:0,62,768	0/0:26,0:26:69.04:0,69,876	1/1:13,0:13:23.94:201,24,0	0/0:24,0:24:48.02:0,48,571	1/1:14,2:16:33.27:245,33,0	1/1:10,2:12:14.81:100,15,0	0/0:25,0:25:69.12:0,69,844	0/0:25,1:26:2.11:0,2,622	1/1:12,4:16:23.31:168,23,0	0/0:16,0:16:24.38:0,24,188	0/0:23,0:23:55.20:0,55,706	1/1:15,2:17:26.79:190,27,0	1/1:10,1:11:14.88:105,15,0	0/0:11,0:11:23.74:0,24,248	0/0:10,0:10:14.28:0,14,137	0/1:18,0:17:0.14:0,0,219	0/0:26,0:26:55.86:0,56,641	0/0:12,0:12:17.95:0,18,253	0/0:26,0:26:62.44:0,62,731	1/1:19,1:19:51.68:404,52,0	1/1:18,1:19:50.61:375,51,0	0/0:17,0:17:5.63:0,6,229	1/1:12,0:11:17.84:124,18,0
chr10	49421251	.	A	AG	401.02	PASS	AB=0.842;AC=9;AF=0.161;AN=56;BaseQRankSum=-1.038;DP=559;FS=1.814;HRun=10;HaplotypeScore=104.1276;InbreedingCoeff=0.2389;MQ=82.31;MQ0=1;MQRankSum=-0.147;QD=3.75;ReadPosRankSum=-2.760;VQSLOD=0.4386;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:29:40.91:0,41,325	0/1:6,3:9:55.90:71,0,56	0/0:25,0:27:31.21:0,31,342	0/1:13,0:12:2.34:2,0,105	0/0:15,0:15:17.71:0,18,55	0/0:23,0:24:46.92:0,47,375	0/0:28,0:28:56.72:0,57,467	0/0:19,0:19:6.62:0,7,20	0/0:24,0:24:29.79:0,30,238	0/0:20,0:20:10.87:0,11,33	0/0:14,0:14:10.89:0,11,33	0/0:24,0:24:53.88:0,54,442	0/0:25,0:25:42.95:0,43,330	0/0:17,0:17:17.34:0,17,55	1/1:11,11:22:9.48:97,9,0	0/0:23,0:25:45.26:0,45,352	0/0:20,0:20:19.96:0,20,62	0/0:13,0:13:11.08:0,11,34	0/1:6,5:11:28.20:138,0,28	1/1:12,1:13:3.01:32,3,0	0/1:18,2:19:34.22:74,0,34	0/0:26,0:28:39.96:0,40,305	0/0:13,0:13:13.51:0,14,101	0/0:24,0:26:46.93:0,47,374	0/0:25,0:24:18.06:0,18,55	0/0:22,0:22:23.60:0,24,72	0/1:16,3:19:28.26:122,0,28	0/0:14,0:13:11.08:0,11,34
chr10	49422208	.	TAA	T	4725.68	PASS	AB=0.561;AC=24;AF=0.429;AN=56;BaseQRankSum=-3.017;DP=569;FS=13.509;HRun=13;HaplotypeScore=84.3412;InbreedingCoeff=0.8325;MQ=71.45;MQ0=3;MQRankSum=1.171;QD=16.58;ReadPosRankSum=1.795;VQSLOD=2.4263;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:85.07:0,85,1115	0/0:7,0:8:21.07:0,21,289	0/0:17,0:12:1.57:0,2,83	0/0:14,0:13:9.82:0,10,60	1/1:7,23:30:55.28:549,55,0	0/0:4,0:17:34.93:0,35,120	0/0:6,0:26:23.06:0,23,185	1/1:6,21:29:44.82:581,45,0	0/0:6,0:18:31.47:0,31,189	1/1:5,19:24:25.11:447,25,0	1/1:6,20:28:44.39:401,44,0	0/0:7,1:26:14.30:0,14,119	0/0:4,0:13:17.84:0,18,76	1/1:4,7:11:17.95:170,18,0	0/0:22,0:24:48.77:0,49,608	1/1:3,15:17:39.02:378,39,0	1/1:2,19:20:51.07:494,51,0	1/1:1,13:14:39.02:369,39,0	0/0:20,0:22:35.58:0,36,443	0/0:13,0:16:37.08:0,37,414	0/0:12,0:12:27.05:0,27,368	0/1:3,2:18:27.37:27,0,108	0/1:8,2:30:3.76:4,0,160	0/0:2,0:19:34.93:0,35,120	1/1:6,15:21:50.39:473,50,0	1/1:4,26:31:56.88:628,57,0	0/0:18,0:19:51.15:0,51,703	1/1:2,7:9:21.02:204,21,0
chr10	49423022	.	G	GT	3746.77	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-2.796;DP=681;FS=5.269;HRun=1;HaplotypeScore=97.3317;InbreedingCoeff=0.9997;MQ=86.86;MQ0=0;MQRankSum=-3.198;QD=42.58;ReadPosRankSum=0.275;VQSLOD=3.4468;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,123,1593	0/0:10,0:10:30.08:0,30,375	0/0:25,0:25:69.20:0,69,854	0/0:20,0:20:57.18:0,57,731	0/0:24,0:24:72.22:0,72,919	0/0:30,0:30:90.24:0,90,1135	0/0:22,0:22:66.14:0,66,807	0/0:39,0:39:99:0,117,1482	0/0:24,0:24:72.22:0,72,920	0/0:29,0:29:87.28:0,87,1129	0/0:20,0:20:60.17:0,60,749	0/0:30,0:30:87.22:0,87,1083	0/0:28,0:28:81.26:0,81,1048	0/0:19,0:19:54.18:0,54,700	0/0:38,0:38:99:0,111,1441	0/0:29,0:29:81.23:0,81,1021	0/0:28,0:28:81.21:0,81,1005	0/0:20,0:20:60.17:0,60,762	1/1:1,15:16:48.12:694,48,0	1/1:0,24:24:72.16:1029,72,0	1/1:0,20:20:60.20:899,60,0	0/0:22,0:22:63.20:0,63,818	0/0:18,0:18:48.16:0,48,620	0/0:26,0:26:78.18:0,78,964	0/0:26,0:26:78.25:0,78,1012	0/0:15,0:15:45.15:0,45,583	1/1:2,26:28:75.25:1124,75,0	0/0:10,0:10:30.10:0,30,389
chr10	49424613	.	A	AG	1004.87	PASS	AB=0.676;AC=14;AF=0.250;AN=56;BaseQRankSum=4.202;DP=508;FS=0.000;HRun=1;HaplotypeScore=78.7472;InbreedingCoeff=0.5107;MQ=76.58;MQ0=1;MQRankSum=3.296;QD=4.95;ReadPosRankSum=1.379;VQSLOD=0.3856;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:42.01:0,42,492	0/0:7,0:7:21.06:0,21,261	0/0:19,0:15:22.99:0,23,356	0/0:14,0:12:19.57:0,20,264	1/1:13,16:29:4.23:152,4,0	0/0:15,0:15:29.82:0,30,348	0/0:17,0:17:39.11:0,39,479	0/1:17,10:27:14.84:140,0,15	0/0:15,0:15:45.10:0,45,552	0/1:7,15:22:15.36:127,0,15	1/1:4,18:22:27.61:187,28,0	0/0:17,0:17:36.11:0,36,448	0/0:16,0:16:38.87:0,39,443	0/1:10,2:12:1.19:53,0,1	0/0:18,0:18:47.97:0,48,571	0/0:12,0:12:33.11:0,33,422	0/1:6,14:20:9.39:93,0,9	1/1:9,18:27:12.93:144,13,0	0/0:17,0:17:48.14:0,48,596	0/0:33,0:33:74.97:0,75,1147	0/0:7,0:6:17.79:0,18,230	0/0:21,0:21:60.14:0,60,725	0/0:23,0:23:45.12:0,45,547	0/0:17,0:17:39.11:0,39,485	1/1:5,10:15:16.78:132,17,0	0/1:10,12:22:0.87:118,0,1	0/0:20,0:20:51.11:0,51,629	0/1:3,4:7:16.46:32,0,16
chr10	49424614	.	G	GGT	586.54	PASS	AB=0.959;AC=12;AF=0.214;AN=56;BaseQRankSum=6.223;DP=521;FS=1.106;HRun=0;HaplotypeScore=96.4889;InbreedingCoeff=0.1817;MQ=73.76;MQ0=1;MQRankSum=2.758;QD=2.83;ReadPosRankSum=2.105;VQSLOD=2.0871;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:42.12:0,42,602	0/0:7,0:7:21.07:0,21,333	0/0:16,0:12:35.67:0,36,484	0/0:15,0:12:14.07:0,14,282	0/1:27,1:28:17.78:131,0,18	0/0:17,0:17:30.05:0,30,445	0/0:17,0:17:39.08:0,39,593	0/1:26,0:26:36.49:36,0,66	0/0:15,0:15:45.15:0,45,677	0/1:21,0:21:49.39:79,0,49	1/1:22,0:22:10.86:67,11,0	0/0:17,0:17:39.10:0,39,547	0/0:16,0:16:38.79:0,39,521	0/1:14,1:15:15.52:39,0,16	0/0:19,0:19:51.15:0,51,765	0/0:15,0:15:39.07:0,39,588	0/1:19,2:21:25.16:73,0,25	0/1:25,2:28:0.16:119,0,0	0/0:17,0:17:48.16:0,48,728	0/0:33,0:33:89.68:0,90,1403	0/0:8,0:7:18.06:0,18,279	0/0:22,0:22:60.18:0,60,893	0/0:23,0:23:48.10:0,48,708	0/0:18,0:18:39.11:0,39,589	1/1:13,1:14:2.55:83,3,0	0/1:22,2:24:16.76:106,0,17	0/0:20,0:21:54.15:0,54,791	0/1:8,0:8:4.75:5,0,30
chr10	49424615	.	CTT	C	656.73	PASS	AB=0.759;AC=11;AF=0.196;AN=56;BaseQRankSum=-1.989;DP=550;FS=0.000;HRun=17;HaplotypeScore=87.3634;InbreedingCoeff=0.6594;MQ=71.82;MQ0=2;MQRankSum=-0.736;QD=5.05;ReadPosRankSum=4.750;VQSLOD=-0.6400;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:39.41:0,39,374	0/0:7,0:8:24.05:0,24,278	0/0:16,0:13:20.45:0,20,186	0/1:14,0:11:7.83:8,0,85	0/0:29,0:29:48.87:0,49,471	0/0:13,0:20:37.21:0,37,360	0/0:13,0:17:30.61:0,31,283	0/0:30,0:30:57.09:0,57,625	0/0:14,0:16:31.83:0,32,271	0/0:22,0:22:42.91:0,43,405	0/0:22,0:22:42.45:0,42,413	1/1:6,9:17:11.47:121,11,0	0/1:7,9:16:3.23:119,0,3	0/0:16,0:16:32.04:0,32,320	0/0:17,0:19:42.10:0,42,495	0/0:11,0:15:32.28:0,32,344	0/0:25,0:25:44.98:0,45,445	0/0:30,0:30:42.93:0,43,400	0/0:8,1:17:4.26:0,4,117	0/0:16,1:33:21.80:0,22,205	0/0:6,0:8:5.83:0,6,32	1/1:8,14:22:25.96:231,26,0	1/1:5,16:22:22:175,22,0	1/1:6,11:17:17.76:142,18,0	0/0:17,0:17:32.94:0,33,300	0/0:27,0:27:58.28:0,58,574	0/1:12,1:21:26.60:27,0,60	0/0:11,0:11:27.07:0,27,312
chr10	49425368	.	TAGC	T	545.23	PASS	AB=0.784;AC=17;AF=0.708;AN=24;BaseQRankSum=-2.420;DP=572;FS=1.906;HRun=0;HaplotypeScore=96.0329;InbreedingCoeff=0.3353;MQ=63.84;MQ0=14;MQRankSum=-0.554;QD=2.25;ReadPosRankSum=-0.204;VQSLOD=1.9051;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	./.	./.	0/0:30,0:29:0:0,0,0	./.	1/1:13,0:27:5.79:57,6,0	./.	./.	0/1:21,0:29:26.63:27,0,38	1/1:19,0:25:0.89:2,1,0	1/1:21,9:30:18.06:228,18,0	1/1:25,8:32:12:135,12,0	0/0:22,0:21:3:0,3,25	1/1:22,12:34:9:97,9,0	1/1:24,4:28:3.01:38,3,0	./.	./.	./.	./.	./.	1/1:22,0:32:2.98:21,3,0	./.	./.	0/0:22,0:22:8.84:0,9,94	1/1:4,0:4:3.01:38,3,0
chr10	49425370	.	G	GCAA	997.55	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=-0.872;DP=564;FS=3.501;HRun=0;HaplotypeScore=96.6953;InbreedingCoeff=0.7832;MQ=63.67;MQ0=16;MQRankSum=0.430;QD=7.61;ReadPosRankSum=-2.043;VQSLOD=1.9558;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:29.94:0,30,244	0/0:7,0:6:17.98:0,18,150	0/0:34,0:16:19.99:0,20,290	0/1:54,0:30:32.97:33,0,542	0/0:4,0:4:5.99:0,6,48	0/0:12,0:11:23.95:0,24,195	0/0:30,0:29:83.69:0,84,702	0/0:13,0:12:34.20:0,34,288	0/0:26,0:26:34.69:0,35,266	0/0:23,0:21:46.32:0,46,377	0/0:6,0:6:11.98:0,12,99	0/0:29,0:29:47.49:0,47,412	0/0:25,0:25:56.64:0,57,437	0/0:27,0:27:65.97:0,66,584	0/0:32,0:31:71.92:0,72,612	0/0:20,0:19:34.01:0,34,336	0/0:34,0:34:68.76:0,69,563	0/0:28,0:28:65.75:0,66,526	1/1:13,0:12:23.61:232,24,0	1/1:5,0:5:12:104,12,0	1/1:36,0:34:52.66:585,53,0	0/0:7,0:7:8.99:0,9,75	0/0:7,0:7:17.95:0,18,144	0/0:32,0:32:45.81:0,46,406	0/0:10,0:9:14.99:0,15,127	0/0:11,0:9:27.01:0,27,241	1/1:0,23:23:9.03:201,9,0	0/0:4,0:4:11.99:0,12,110
chr10	49425569	.	GT	G	5446.02	PASS	AB=0.867;AC=29;AF=0.518;AN=56;BaseQRankSum=8.222;DP=563;FS=4.096;HRun=10;HaplotypeScore=64.8158;InbreedingCoeff=0.9168;MQ=79.65;MQ0=0;MQRankSum=-0.376;QD=19.73;ReadPosRankSum=3.391;VQSLOD=5.9369;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:20:56.95:0,57,591	1/1:1,5:6:11.99:104,12,0	0/1:11,2:13:26.21:26,0,122	0/0:18,0:18:15.83:0,16,224	0/0:13,0:15:41.91:0,42,415	1/1:2,22:24:53.99:468,54,0	1/1:2,15:17:38.99:338,39,0	0/0:36,2:38:41.24:0,41,874	1/1:2,21:23:56.99:495,57,0	0/0:25,0:24:60.13:0,60,651	0/0:13,0:13:39.11:0,39,431	1/1:1,15:16:38.99:338,39,0	1/1:3,16:19:41.99:364,42,0	0/0:26,0:26:78.20:0,78,854	1/1:2,20:22:59.98:521,60,0	0/0:1,0:20:40.05:0,40,201	0/0:25,0:25:57.12:0,57,612	0/0:22,0:22:63:0,63,678	1/1:2,22:24:65.98:570,66,0	1/1:4,12:16:35.93:305,36,0	1/1:4,2:6:11.98:100,12,0	1/1:0,8:8:24:208,24,0	1/1:6,27:33:71.96:625,72,0	1/1:1,20:21:20.81:409,21,0	0/0:25,0:26:68.90:0,69,707	0/0:30,0:30:53.19:0,53,617	1/1:1,27:28:65.98:573,66,0	0/0:9,0:9:21.06:0,21,232
chr10	49425824	.	GGTGT	G	5572.13	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=4.028;DP=872;FS=2.927;HRun=0;HaplotypeScore=190.8020;InbreedingCoeff=0.9332;MQ=52.73;MQ0=21;MQRankSum=1.753;QD=20.26;ReadPosRankSum=3.911;VQSLOD=4.5743;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:48:92.80:0,93,1983	1/1:5,0:11:15.01:138,15,0	0/0:39,0:22:9.50:0,10,137	0/0:42,0:25:17.52:0,18,261	0/0:15,0:18:3.48:0,3,45	1/1:15,6:22:20.59:298,21,0	1/1:14,19:35:57.17:854,57,0	0/0:39,0:43:51.51:0,52,739	0/0:16,0:33:41.59:0,42,248	0/0:17,0:23:35.29:0,35,554	0/0:4,0:11:5.31:0,5,27	1/1:6,29:40:52.64:922,53,0	1/1:9,16:27:51.64:805,52,0	0/0:12,0:26:28.99:0,29,399	1/1:13,0:34:41.97:391,42,0	0/0:10,0:22:21.54:0,22,367	0/0:22,0:33:32.89:0,33,459	0/0:17,0:32:42.13:0,42,679	0/0:25,0:26:32.51:0,33,595	0/0:19,0:18:24.08:0,24,571	0/0:58,0:57:80.71:0,81,1653	1/1:9,7:18:11.78:168,12,0	1/1:8,23:32:45.11:698,45,0	1/1:15,37:54:76.87:1298,77,0	0/0:13,0:27:29.63:0,30,432	0/0:31,0:42:64.47:0,64,997	0/0:23,0:25:53.40:0,53,1117	0/0:4,0:11:12.04:0,12,196
chr10	49427447	.	A	AT	11275.29	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=1.471;DP=570;FS=0.391;HRun=9;HaplotypeScore=103.5492;InbreedingCoeff=0.9884;MQ=74.33;MQ0=1;MQRankSum=-3.582;QD=25.86;ReadPosRankSum=1.635;VQSLOD=4.4754;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:50.96:0,51,443	1/1:0,10:10:27.07:299,27,0	0/0:12,0:12:20.85:0,21,163	0/0:12,0:12:25.77:0,26,205	1/1:3,24:27:60.12:649,60,0	0/0:24,0:24:65.96:0,66,568	0/0:20,0:20:50.96:0,51,438	1/1:6,24:32:50.17:780,50,0	0/0:20,1:21:17.79:0,18,383	1/1:3,19:22:57.15:630,57,0	1/1:2,22:25:62.96:664,63,0	1/1:2,13:15:10.04:339,10,0	1/1:4,27:31:72.19:796,72,0	1/1:2,14:16:45.12:494,45,0	1/1:3,23:25:31.10:571,31,0	0/0:25,0:25:62.97:0,63,543	1/1:2,21:23:57.15:631,57,0	1/1:2,15:17:42.11:465,42,0	1/1:3,10:13:30.06:322,30,0	1/1:3,24:27:43.09:688,43,0	1/1:0,17:17:51.14:561,51,0	1/1:4,13:17:36.10:398,36,0	1/1:2,14:16:45.58:490,46,0	1/1:3,17:20:51.14:564,51,0	1/1:3,14:18:32.92:346,33,0	1/1:3,15:18:42.11:464,42,0	1/1:3,23:28:68.85:725,69,0	1/1:5,13:18:36.10:398,36,0
chr10	49427682	.	CTT	C	844.88	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.673;DP=525;FS=2.741;HRun=5;HaplotypeScore=72.1375;InbreedingCoeff=0.9509;MQ=65.27;MQ0=1;MQRankSum=-0.328;QD=29.13;ReadPosRankSum=0.991;VQSLOD=2.8841;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:84.24:0,84,1417	1/1:0,8:8:18.06:251,18,0	0/0:16,0:16:29.15:0,29,545	0/0:6,0:6:9.03:0,9,165	0/0:31,0:27:45.14:0,45,787	0/0:20,0:20:54.19:0,54,990	0/0:17,0:17:45.15:0,45,825	0/0:28,0:28:81.19:0,81,1389	0/0:17,0:17:45.10:0,45,761	0/0:19,0:17:39.13:0,39,714	0/0:17,0:16:45.15:0,45,792	0/0:15,0:15:45.15:0,45,817	0/0:20,0:20:60.20:0,60,1063	0/0:22,0:21:63.18:0,63,1109	1/1:1,20:21:51.17:713,51,0	0/0:21,0:21:57.20:0,57,1045	0/0:16,0:16:42.13:0,42,738	0/0:15,0:15:42.14:0,42,750	0/0:20,0:19:51.16:0,51,904	0/0:22,0:22:57.19:0,57,1017	0/0:5,0:5:15.05:0,15,266	0/0:15,0:15:39.12:0,39,654	0/0:21,0:21:54.19:0,54,987	0/0:26,0:25:75.26:0,75,1369	0/0:10,0:8:15.05:0,15,274	0/0:22,0:22:57.20:0,57,1028	0/0:25,0:25:69.23:0,69,1219	0/0:20,0:20:48.16:0,48,864
chr10	49427738	.	T	TC	1104.47	PASS	AB=0.786;AC=10;AF=0.179;AN=56;BaseQRankSum=9.158;DP=577;FS=13.708;HRun=2;HaplotypeScore=123.3653;InbreedingCoeff=-0.1154;MQ=52.46;MQ0=5;MQRankSum=-7.526;QD=4.93;ReadPosRankSum=1.433;VQSLOD=-0.5765;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:57.34:0,57,843	0/0:8,0:8:18.06:0,18,233	0/0:28,0:12:16.16:0,16,252	0/0:40,0:26:50.29:0,50,616	0/1:24,10:28:26.64:27,0,144	0/0:26,0:26:59.93:0,60,751	0/0:17,0:17:48.14:0,48,608	0/1:27,0:27:51.56:130,0,52	0/0:18,0:18:45.15:0,45,584	0/1:13,12:19:10.21:226,0,10	0/1:14,6:19:61.47:122,0,61	0/0:11,0:11:24.08:0,24,312	0/0:21,0:21:50.72:0,51,646	0/1:16,12:24:93.34:221,0,93	0/0:27,0:27:63.18:0,63,789	0/0:17,0:17:45.13:0,45,559	0/1:19,3:22:70.82:71,0,93	0/1:13,4:17:49.22:125,0,49	0/0:17,0:17:51.16:0,51,642	0/0:22,0:21:57.11:0,57,691	0/0:9,0:9:27.09:0,27,350	0/0:12,0:12:27.03:0,27,329	0/0:16,0:16:45.09:0,45,561	0/0:20,0:20:54.14:0,54,686	0/1:6,5:9:1.55:83,0,2	0/1:21,8:25:73.98:196,0,74	0/0:17,0:17:36.08:0,36,466	0/1:8,3:8:34.99:50,0,35
chr10	49427740	.	T	TCTTCC	6829.02	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=13.332;DP=575;FS=53.440;HRun=0;HaplotypeScore=141.3181;InbreedingCoeff=0.9908;MQ=51.45;MQ0=6;MQRankSum=-11.037;QD=30.90;ReadPosRankSum=1.659;VQSLOD=2.3905;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:58.14:0,58,1396	0/0:8,0:8:21.03:0,21,420	0/0:28,0:11:20.23:0,20,406	0/0:41,0:27:23.80:0,24,1013	1/1:23,10:27:54.88:631,55,0	0/0:27,0:27:60.20:0,60,1307	0/0:17,0:17:51.15:0,51,999	1/1:24,0:24:36.37:624,36,0	0/0:19,0:19:45.15:0,45,1030	1/1:13,12:19:37.30:889,37,0	1/1:13,6:18:20.90:511,21,0	0/0:11,0:11:23.76:0,24,542	0/0:22,0:22:53.88:0,54,1123	1/1:16,11:24:68.24:1124,68,0	0/0:25,0:25:60.20:0,60,1277	0/0:16,0:16:42.14:0,42,919	1/1:18,3:21:14.69:612,15,0	1/1:13,4:18:19.25:631,19,0	0/0:15,0:15:45.15:0,45,987	0/0:23,0:22:57.18:0,57,1170	0/0:9,0:9:27.09:0,27,629	0/0:12,0:12:27.09:0,27,599	0/0:18,0:18:45.15:0,45,941	0/0:21,0:21:53.80:0,54,1174	1/1:6,5:9:26.68:519,27,0	1/1:23,8:27:70.72:1017,71,0	0/0:17,0:17:36.12:0,36,816	1/1:8,3:8:14.58:270,15,0
chr10	49428645	.	GA	G	4553.79	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=7.363;DP=655;FS=0.000;HRun=1;HaplotypeScore=99.1670;InbreedingCoeff=0.9994;MQ=84.88;MQ0=0;MQRankSum=-2.466;QD=37.63;ReadPosRankSum=2.998;VQSLOD=5.0415;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,108,1674	0/0:10,0:10:30.10:0,30,438	0/0:18,0:18:44.33:0,44,742	0/0:24,0:25:59.37:0,59,933	0/0:31,0:31:90.18:0,90,1290	0/0:19,0:19:57.16:0,57,862	0/0:33,0:33:99:0,99,1554	0/0:23,0:23:69.15:0,69,951	0/0:15,0:15:45.14:0,45,693	0/0:27,0:27:72.24:0,72,1127	0/0:10,0:10:27.08:0,27,406	1/1:0,29:29:72.24:1002,72,0	1/1:0,28:28:78.26:1086,78,0	0/0:25,0:25:75.24:0,75,1172	0/0:23,0:23:69.22:0,69,1017	0/0:29,0:29:87.28:0,87,1361	0/0:47,0:47:99:0,141,2215	0/0:36,0:36:99:0,108,1621	0/0:16,0:16:48.14:0,48,701	0/0:18,0:18:48.15:0,48,722	0/0:22,0:22:66.21:0,66,1030	1/1:0,19:19:51.17:708,51,0	1/1:0,16:16:48.16:668,48,0	1/1:0,29:29:78.26:1090,78,0	0/0:16,0:16:48.16:0,48,761	0/0:24,0:24:72.23:0,72,1127	0/0:21,0:21:60.18:0,60,907	0/0:9,0:9:27.09:0,27,431
chr10	49429776	.	C	CAAGA	5880.68	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=-4.826;DP=715;FS=7.676;HRun=0;HaplotypeScore=153.5886;InbreedingCoeff=0.8527;MQ=77.77;MQ0=1;MQRankSum=-7.564;QD=57.09;ReadPosRankSum=-0.292;VQSLOD=5.6611;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,102,1822	0/0:20,0:20:60.21:0,60,1120	0/0:18,0:18:41.81:0,42,719	0/1:18,0:18:0.99:1,0,533	0/0:27,0:27:81.28:0,81,1511	1/1:6,23:29:72.25:1892,72,0	1/1:7,19:26:66.23:1692,66,0	0/0:18,0:18:45.15:0,45,840	1/1:1,28:30:87.30:2295,87,0	0/0:30,0:30:84.27:0,84,1522	0/0:18,0:18:54.15:0,54,942	0/0:31,0:31:90.29:0,90,1648	0/0:30,0:30:84.21:0,84,1467	0/0:32,0:32:90.31:0,90,1680	0/0:30,0:30:78.27:0,78,1444	0/0:27,0:27:72.25:0,72,1344	0/0:41,0:41:99:0,117,2075	0/0:33,0:33:90.31:0,90,1679	0/0:21,0:21:63.21:0,63,1136	0/0:23,0:23:69.24:0,69,1287	0/0:31,0:30:84.26:0,84,1506	0/0:21,0:21:54.19:0,54,998	0/0:17,0:17:51.16:0,51,921	0/0:35,0:35:90.26:0,90,1632	0/0:19,0:19:57.20:0,57,1063	0/0:26,0:26:69.24:0,69,1278	0/0:25,0:25:63.19:0,63,1113	0/0:2,0:2:3.01:0,3,56
chr10	49429937	.	CAACA	C	7455.05	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=6.422;DP=722;FS=1.395;HRun=0;HaplotypeScore=152.7654;InbreedingCoeff=0.9135;MQ=65.05;MQ0=2;MQRankSum=1.424;QD=16.87;ReadPosRankSum=2.224;VQSLOD=4.8070;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:84.29:0,84,1961	1/1:5,5:10:15.05:237,15,0	0/0:28,0:24:9.03:0,9,182	0/0:27,0:26:12.04:0,12,228	1/1:15,0:31:9.87:103,10,0	1/1:12,21:33:60.20:926,60,0	1/1:10,16:26:37.41:658,37,0	1/1:24,0:31:6.45:96,6,0	1/1:7,13:20:36.12:570,36,0	1/1:8,0:24:37.52:329,38,0	1/1:10,0:21:17.25:160,17,0	0/0:21,0:31:42.14:0,42,794	0/0:18,0:32:36.12:0,36,681	1/1:11,0:26:30.03:279,30,0	1/1:12,24:35:60.20:950,60,0	0/0:40,2:42:42.82:0,43,2001	1/1:12,0:23:19.25:166,19,0	1/1:9,0:15:3:28,3,0	1/1:13,9:22:24.06:354,24,0	1/1:10,17:27:36.12:558,36,0	1/1:10,14:24:33.11:510,33,0	0/0:12,0:26:27.09:0,27,480	0/0:18,0:23:33.11:0,33,581	0/0:25,0:32:16.77:0,17,319	1/1:6,0:18:22.78:221,23,0	1/1:5,0:24:47.67:447,48,0	1/1:7,20:27:51.17:807,51,0	1/1:0,0:4:6.01:56,6,0
chr10	49430240	.	T	TC	141.41	PASS	AB=0.966;AC=7;AF=0.125;AN=56;BaseQRankSum=-1.005;DP=429;FS=3.302;HRun=0;HaplotypeScore=57.3335;InbreedingCoeff=-0.1509;MQ=62.57;MQ0=0;MQRankSum=2.234;QD=2.14;ReadPosRankSum=-6.036;VQSLOD=-0.1658;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:96.29:0,96,1305	0/0:11,0:11:33.11:0,33,462	0/0:20,0:19:45.13:0,45,588	0/0:4,0:3:9.02:0,9,108	0/0:12,2:14:35.92:0,36,391	0/0:9,0:9:2.08:0,2,269	0/1:7,0:7:43.86:44,0,144	0/1:9,4:13:74.17:74,0,255	0/0:10,0:10:27.05:0,27,305	0/1:7,0:6:51.43:51,0,95	0/0:8,0:8:3.83:0,4,205	0/0:14,0:14:42.13:0,42,569	0/0:19,0:19:57.19:0,57,796	0/1:6,0:6:10.24:10,0,127	0/0:23,0:23:69.23:0,69,965	0/0:20,0:20:60.19:0,60,823	0/1:12,0:12:0.94:1,0,192	0/0:11,0:11:9.03:0,9,114	0/0:21,0:19:54.18:0,54,755	0/0:30,0:30:90.30:0,90,1259	0/0:16,0:16:45.15:0,45,628	0/0:28,0:28:84.28:0,84,1172	0/0:20,0:20:60.20:0,60,831	0/0:16,0:16:48.12:0,48,634	0/1:8,0:8:67.90:68,0,92	0/1:13,0:13:13.89:14,0,347	0/0:30,0:30:90.28:0,90,1236	0/0:6,0:6:18.02:0,18,182
chr10	49430890	.	G	GA	2916.32	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-7.748;DP=563;FS=7.283;HRun=6;HaplotypeScore=55.4237;InbreedingCoeff=0.9993;MQ=91.62;MQ0=0;MQRankSum=-2.637;QD=31.36;ReadPosRankSum=2.078;VQSLOD=4.1442;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:66.02:0,66,657	0/0:9,0:9:24.05:0,24,245	0/0:24,0:24:57.13:0,57,581	0/0:26,0:26:33.36:0,33,520	0/0:20,0:20:60.14:0,60,612	0/0:29,0:29:66.14:0,66,673	0/0:20,0:20:57.13:0,57,581	0/0:36,0:36:90.19:0,90,913	0/0:17,0:17:42.08:0,42,421	0/0:18,0:18:54.12:0,54,547	0/0:16,0:16:42.07:0,42,416	1/1:0,20:20:54.17:679,54,0	1/1:1,18:19:45.03:566,45,0	0/0:13,0:13:36.08:0,36,367	0/0:20,0:20:60.12:0,60,605	0/0:19,0:19:54.10:0,54,538	0/0:23,0:23:63.14:0,63,642	0/0:19,0:19:45.10:0,45,459	0/0:24,0:24:60.13:0,60,606	0/0:22,0:22:60.14:0,60,612	0/0:14,0:14:39.07:0,39,390	1/1:0,17:17:48.15:604,48,0	1/1:1,16:17:48.15:604,48,0	1/1:1,19:20:51.16:639,51,0	0/0:20,0:20:57.08:0,57,560	0/0:23,0:23:69.16:0,69,704	0/0:25,0:25:66.11:0,66,662	0/0:11,0:11:33.08:0,33,336
chr10	49431098	.	TCA	T	565.04	PASS	AB=0.912;AC=11;AF=0.196;AN=56;BaseQRankSum=7.178;DP=427;FS=18.746;HRun=0;HaplotypeScore=75.2405;InbreedingCoeff=-0.1800;MQ=73.67;MQ0=0;MQRankSum=-0.012;QD=3.34;ReadPosRankSum=5.520;VQSLOD=0.2610;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:13,1:14:3.50:4,0,369	0/0:7,0:7:18.05:0,18,254	0/0:10,0:9:9.92:0,10,70	0/1:10,0:8:5.85:10,0,6	0/0:11,0:11:23.85:0,24,182	0/0:21,0:21:54.01:0,54,625	0/0:24,0:24:68.80:0,69,893	0/0:21,0:21:47.70:0,48,398	0/0:18,0:18:44.85:0,45,532	0/0:10,0:10:22.93:0,23,176	0/0:12,0:12:21.46:0,21,188	0/1:13,1:14:26.96:27,0,101	0/1:9,1:11:35.63:47,0,36	0/0:13,0:13:28.62:0,29,216	0/0:31,0:30:93.28:0,93,1337	0/0:15,0:15:27.04:0,27,222	0/1:20,5:26:83.65:197,0,84	0/1:10,0:10:7.97:16,0,8	0/1:15,4:19:81.12:81,0,135	0/1:14,0:14:11.43:11,0,179	0/0:12,0:12:13.37:0,13,147	0/0:19,0:19:1.29:0,1,140	0/1:15,1:16:42.74:43,0,75	0/1:12,0:12:8.59:9,0,86	0/0:18,0:18:30.29:0,30,255	0/0:11,0:11:22.51:0,23,192	0/1:15,7:23:18.11:262,0,18	0/0:5,0:5:14.39:0,14,158
chr10	49431108	.	C	CT	1703.63	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=-9.329;DP=453;FS=13.992;HRun=0;HaplotypeScore=73.2763;InbreedingCoeff=0.7961;MQ=73.89;MQ0=0;MQRankSum=0.110;QD=17.04;ReadPosRankSum=5.938;VQSLOD=4.9064;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:56.90:0,57,541	0/0:6,0:6:8.82:0,9,26	0/0:16,0:12:23.08:0,23,216	0/0:10,0:8:11.91:0,12,95	0/0:13,0:13:26.97:0,27,227	1/1:1,17:18:39.11:504,39,0	1/1:0,27:27:63.20:806,63,0	0/0:17,0:17:31.66:0,32,246	1/1:2,18:20:39.10:499,39,0	0/0:10,0:10:20.97:0,21,178	0/0:12,0:12:32.89:0,33,266	0/0:18,0:18:29.81:0,30,233	0/0:12,0:12:26.66:0,27,183	0/0:15,0:15:22.50:0,23,174	0/1:35,0:34:43.36:43,0,82	0/0:20,0:20:40.42:0,40,327	0/0:25,0:25:62.21:0,62,422	0/0:9,0:9:20.69:0,21,133	0/0:18,0:18:50.31:0,50,360	0/0:18,0:18:41.76:0,42,323	0/0:10,0:10:18.25:0,18,123	0/0:22,0:22:59.32:0,59,423	0/0:16,0:16:41.61:0,42,317	0/0:13,0:13:29.73:0,30,215	0/0:15,0:15:29.95:0,30,254	0/0:8,0:8:20.93:0,21,169	0/0:25,0:25:65.21:0,65,446	0/0:4,0:4:11.99:0,12,114
chr10	49436321	.	AGCAGCATATGTACTTGGT	A	1797.50	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.836;DP=593;FS=1.140;HRun=0;HaplotypeScore=307.5675;InbreedingCoeff=0.9432;MQ=81.57;MQ0=0;MQRankSum=-5.892;QD=119.83;ReadPosRankSum=1.892;VQSLOD=2.7681;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:90.30:0,90,7427	0/0:11,0:11:30.10:0,30,2625	0/0:16,0:17:48.16:0,48,2569	0/0:17,0:17:51.17:0,51,3649	0/0:21,0:21:57.20:0,57,4244	0/0:30,0:29:87.30:0,87,6994	0/0:27,0:27:81.25:0,81,5998	0/0:32,0:32:96.31:0,96,7200	0/0:32,0:32:96.32:0,96,7990	0/0:20,0:20:54.19:0,54,3864	0/0:11,0:11:33.11:0,33,2387	0/0:23,0:23:69.24:0,69,5813	0/0:24,0:24:72.25:0,72,5621	0/0:31,0:31:90.31:0,90,7564	0/0:17,0:17:51.17:0,51,4104	1/1:2,13:15:36.12:1892,36,0	0/0:20,0:20:57.20:0,57,4258	0/0:25,0:25:75.26:0,75,6230	0/0:15,0:15:45.15:0,45,3356	0/0:11,0:11:33.11:0,33,2480	0/0:44,0:44:99:0,129,10450	0/0:18,0:18:47.67:0,48,3677	0/0:10,0:10:27.09:0,27,2248	0/0:35,0:35:96.33:0,96,7519	0/0:12,0:12:36.12:0,36,2991	0/0:24,0:24:72.24:0,72,5714	0/0:18,0:18:54.19:0,54,3813	0/0:3,0:3:9.03:0,9,778
chr10	49436701	.	GCACACA	G	1068.91	PASS	AB=0.887;AC=26;AF=0.565;AN=46;BaseQRankSum=-0.162;DP=343;FS=0.000;HRun=0;HaplotypeScore=85.9509;InbreedingCoeff=0.2844;MQ=68.79;MQ0=8;MQRankSum=-3.421;QD=6.36;ReadPosRankSum=1.447;VQSLOD=1.5823;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:20:23.21:0,23,536	1/1:2,2:4:2.70:60,3,0	./.	./.	0/1:5,0:5:0:0,0,0	0/0:10,0:9:5.55:0,6,154	0/0:14,0:14:2.52:0,3,74	0/1:17,0:16:1.68:3,0,2	0/0:9,0:8:12.04:0,12,285	1/1:9,0:9:5.99:80,6,0	0/0:5,0:4:3.01:0,3,33	0/0:8,0:14:8.19:0,8,100	0/1:11,0:13:28.50:95,0,28	1/1:3,3:8:9.03:164,9,0	1/1:3,1:6:9.03:145,9,0	0/1:8,0:16:26.66:27,0,208	0/1:16,6:22:8.54:113,0,9	1/1:6,2:8:2.93:61,3,0	./.	1/1:2,0:2:2.99:23,3,0	0/1:26,0:26:37.28:38,0,37	./.	./.	0/0:22,0:34:36.45:0,36,457	1/1:6,2:8:3.01:61,3,0	1/1:9,2:9:3.01:61,3,0	1/1:3,4:8:8.71:163,9,0	1/1:1,3:4:6.91:123,7,0
chr10	49436743	.	A	ACACACT	358.26	PASS	AB=0.795;AC=6;AF=0.111;AN=54;BaseQRankSum=1.674;DP=290;FS=2.198;HRun=0;HaplotypeScore=72.3660;InbreedingCoeff=0.4369;MQ=57.10;MQ0=15;MQRankSum=-2.379;QD=9.43;ReadPosRankSum=-1.295;VQSLOD=1.9697;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:37.21:0,37,390	0/0:2,0:2:3.48:0,3,52	0/0:20,0:12:18.23:0,18,222	0/0:26,0:15:40.75:0,41,390	0/0:2,0:2:5.99:0,6,49	1/1:5,0:4:8.48:140,8,0	1/1:5,11:17:8.56:77,9,0	0/0:20,0:17:35.87:0,36,396	0/1:4,7:12:12.17:254,0,12	0/0:8,0:7:18:0,18,135	./.	0/0:16,0:16:29.71:0,30,310	0/0:8,0:8:13.28:0,13,138	0/0:9,0:8:18:0,18,224	0/0:5,0:5:15.02:0,15,201	0/0:15,0:15:29.96:0,30,375	0/0:15,0:14:17.78:0,18,216	0/1:3,0:3:1.35:1,0,46	0/0:10,0:10:26.92:0,27,220	0/0:2,0:2:3:0,3,25	0/0:21,0:20:38.85:0,39,313	0/0:3,0:3:5.99:0,6,49	0/0:6,0:6:5.99:0,6,48	0/0:20,0:20:54.08:0,54,799	0/0:5,0:5:8.97:0,9,96	0/0:6,0:5:14.79:0,15,139	0/0:5,0:5:9.03:0,9,139	0/0:6,0:5:12.01:0,12,152
chr10	49437682	.	CT	C	12242.26	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=11.199;DP=749;FS=11.537;HRun=3;HaplotypeScore=80.0786;InbreedingCoeff=0.9989;MQ=87.93;MQ0=0;MQRankSum=-1.731;QD=36.76;ReadPosRankSum=1.307;VQSLOD=4.6405;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,153,2242	0/0:14,0:14:42.14:0,42,629	0/0:21,0:21:48.96:0,49,793	0/0:31,0:31:86.34:0,86,1083	1/1:0,30:30:90.29:1165,90,0	1/1:0,21:21:57.19:740,57,0	1/1:0,22:22:60.20:779,60,0	1/1:1,32:33:93.30:1206,93,0	1/1:0,24:25:63.15:798,63,0	1/1:0,45:45:99:1718,135,0	1/1:0,14:14:42.14:545,42,0	0/0:30,0:30:87.29:0,87,1285	0/0:32,0:32:96.32:0,96,1418	1/1:0,32:32:90.29:1169,90,0	0/0:29,0:29:84.28:0,84,1257	0/0:25,0:25:75.25:0,75,1124	1/1:0,36:36:99:1325,102,0	1/1:0,18:18:51.17:660,51,0	0/0:20,0:20:60.19:0,60,878	0/0:23,0:23:69.21:0,69,994	0/0:23,0:23:63.21:0,63,944	0/0:30,0:30:90.30:0,90,1349	0/0:24,0:24:72.24:0,72,1075	0/0:33,0:33:99:0,99,1484	1/1:0,23:23:66.21:857,66,0	1/1:1,27:28:81.26:1046,81,0	0/0:30,0:30:90.29:0,90,1325	1/1:0,6:6:18.06:234,18,0
chr10	49438049	.	TTCCC	T	6075.93	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=-2.964;DP=471;FS=17.377;HRun=0;HaplotypeScore=86.9166;InbreedingCoeff=0.9030;MQ=57.16;MQ0=6;MQRankSum=0.835;QD=27.87;ReadPosRankSum=4.547;VQSLOD=3.4580;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:30.10:0,30,672	1/1:4,7:11:24.08:409,24,0	0/0:19,0:4:8.72:0,9,63	0/0:18,0:4:8.91:0,9,90	0/1:5,0:13:0.98:1,0,162	0/0:10,0:18:11.47:0,11,76	0/0:6,0:16:8.87:0,9,130	0/0:16,0:24:15.12:0,15,187	0/0:8,0:13:23.88:0,24,293	0/0:6,0:15:23.58:0,24,357	0/0:5,0:11:9.83:0,10,84	1/1:3,13:16:30.10:511,30,0	1/1:5,11:16:21.07:358,21,0	0/0:5,0:16:30.08:0,30,463	1/1:5,20:25:39.05:665,39,0	0/0:15,0:15:33.08:0,33,647	0/0:10,0:13:21.48:0,21,258	0/0:7,0:9:12.24:0,12,179	1/1:5,7:11:24.07:372,24,0	1/1:14,18:32:51.08:712,51,0	1/1:3,13:16:27.09:460,27,0	1/1:3,10:13:27.09:446,27,0	1/1:4,14:18:36.12:607,36,0	1/1:2,19:21:45.15:767,45,0	0/0:9,0:17:21.04:0,21,340	0/0:14,0:23:20.29:0,20,234	1/1:4,21:25:45.15:767,45,0	0/0:2,0:6:8.91:0,9,90
chr10	49440065	.	GC	G	7321.63	PASS	AB=1.000;AC=25;AF=0.446;AN=56;BaseQRankSum=12.292;DP=540;FS=5.226;HRun=1;HaplotypeScore=61.6264;InbreedingCoeff=0.9273;MQ=79.48;MQ0=0;MQRankSum=0.360;QD=27.84;ReadPosRankSum=1.889;VQSLOD=4.5975;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:19:60.19:0,60,911	0/0:8,0:8:23.97:0,24,336	0/0:7,0:7:20.87:0,21,220	0/0:18,0:18:44.87:0,45,530	1/1:1,19:20:46.87:615,47,0	1/1:17,0:17:18.16:53,18,0	1/1:21,0:21:17.67:50,18,0	1/1:0,34:34:99:1264,102,0	0/1:19,0:19:12.33:12,0,94	1/1:0,20:20:60.15:797,60,0	1/1:0,20:20:57.15:769,57,0	0/0:12,0:12:36.08:0,36,502	0/0:24,0:24:72.20:0,72,1061	1/1:0,19:19:42.14:583,42,0	0/0:30,0:30:90.24:0,90,1325	0/0:16,0:16:48.11:0,48,670	1/1:0,32:32:87.29:1206,87,0	1/1:1,18:19:45.05:574,45,0	0/0:24,0:24:72.23:0,72,1120	0/0:20,0:20:60.15:0,60,899	0/0:15,0:15:45.14:0,45,689	0/0:19,0:19:36.38:0,36,677	0/0:14,0:14:42.14:0,42,666	0/0:19,0:19:49.57:0,50,783	1/1:0,18:18:45.15:625,45,0	1/1:0,15:16:45.07:552,45,0	0/0:31,0:30:93.20:0,93,1281	1/1:0,7:8:18.02:222,18,0
chr10	49440066	.	CA	C	3852.57	PASS	AB=1.000;AC=25;AF=0.446;AN=56;BaseQRankSum=14.777;DP=542;FS=0.694;HRun=9;HaplotypeScore=73.1219;InbreedingCoeff=0.9156;MQ=77.98;MQ0=0;MQRankSum=-1.482;QD=14.48;ReadPosRankSum=1.892;VQSLOD=3.8664;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:19:57.14:0,57,638	0/0:8,0:8:21.06:0,21,241	0/0:6,0:6:15.02:0,15,149	0/0:17,0:17:32.88:0,33,304	0/1:21,0:21:17.36:161,0,17	1/1:0,17:17:51.03:467,51,0	1/1:0,21:21:63.03:577,63,0	1/1:34,0:34:71.49:376,71,0	1/1:4,15:19:13.41:377,13,0	1/1:21,0:21:50.78:243,51,0	1/1:20,0:20:51.87:278,52,0	0/0:11,0:12:29.92:0,30,326	0/0:24,0:24:63.18:0,63,720	1/1:19,0:19:40.54:219,41,0	0/0:29,0:29:81.20:0,81,920	0/0:17,0:17:42.11:0,42,475	1/1:33,0:33:62.77:445,63,0	1/1:18,1:19:40.75:239,41,0	0/0:24,0:24:69.19:0,69,787	0/0:20,0:20:54.16:0,54,623	0/0:15,0:15:42.12:0,42,484	0/0:19,1:20:20.70:0,21,470	0/0:14,0:14:42.12:0,42,484	0/0:18,1:19:24.15:0,24,527	1/1:18,0:18:43.19:229,43,0	1/1:16,0:16:11.31:146,11,0	0/0:31,0:30:72.05:0,72,810	1/1:8,0:8:16.82:96,17,0
chr10	49440713	.	G	GT	9111.14	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=10.979;DP=720;FS=3.042;HRun=2;HaplotypeScore=86.2785;InbreedingCoeff=0.9946;MQ=80.11;MQ0=0;MQRankSum=-2.071;QD=37.49;ReadPosRankSum=-0.313;VQSLOD=5.1246;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,126,1561	0/0:14,0:14:42.13:0,42,521	0/0:19,0:19:51.16:0,51,626	0/0:18,0:18:19.84:0,20,413	1/1:1,25:26:59.90:840,60,0	0/0:17,0:17:44.50:0,45,528	0/0:31,0:31:87.25:0,87,1063	1/1:3,32:35:93.30:1319,93,0	0/0:22,0:22:66.21:0,66,818	1/1:1,28:31:81.24:1144,81,0	1/1:1,17:18:45.06:593,45,0	0/0:38,0:38:99:0,114,1387	0/0:27,0:27:75.24:0,75,930	1/1:0,34:34:99:1400,99,0	0/0:37,0:37:99:0,108,1339	0/0:31,0:31:84.26:0,84,1040	1/1:1,26:27:69.23:994,69,0	1/1:0,17:17:51.17:734,51,0	0/0:20,0:20:44.17:0,44,526	0/0:18,0:18:51.13:0,51,606	0/0:56,0:56:99:0,156,1833	0/0:22,0:22:66.12:0,66,761	0/0:17,0:17:51.16:0,51,632	0/0:26,0:26:78.23:0,78,953	1/1:4,20:24:57.19:816,57,0	1/1:0,26:26:78.25:1100,78,0	0/0:19,0:19:51.16:0,51,632	1/1:0,5:5:12.04:172,12,0
chr10	49441022	.	A	AACACT	7065.30	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=13.704;DP=484;FS=3.215;HRun=0;HaplotypeScore=127.8931;InbreedingCoeff=0.9894;MQ=82.66;MQ0=0;MQRankSum=-14.090;QD=74.37;ReadPosRankSum=2.514;VQSLOD=6.8367;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,105,2400	0/0:18,0:18:54.19:0,54,1255	0/0:18,0:18:54.19:0,54,1217	0/0:14,0:14:39.09:0,39,815	1/1:0,12:13:24.24:567,24,0	0/0:22,0:22:63.22:0,63,1444	0/0:26,0:26:78.25:0,78,1745	1/1:1,7:8:24.08:645,24,0	0/0:24,0:24:72.23:0,72,1603	1/1:0,8:9:27.09:748,27,0	1/1:0,12:12:33.11:869,33,0	0/0:26,0:26:78.25:0,78,1725	0/0:24,0:24:72.23:0,72,1608	1/1:0,14:14:42.14:1173,42,0	0/0:26,0:26:78.24:0,78,1725	0/0:19,0:19:57.20:0,57,1327	1/1:0,10:10:30.10:806,30,0	1/1:0,3:3:9.03:213,9,0	0/0:11,0:11:33.11:0,33,769	0/0:19,0:19:57.20:0,57,1327	0/0:22,0:22:66.20:0,66,1420	0/0:16,0:16:48.16:0,48,1114	0/0:16,0:16:45.15:0,45,1022	0/0:22,0:22:63.22:0,63,1440	1/1:2,8:10:30.10:856,30,0	1/1:0,8:8:21.07:582,21,0	0/0:27,0:27:81.26:0,81,1816	1/1:0,8:8:24.08:608,24,0
chr10	49441023	.	G	GTC	1886.54	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=14.409;DP=484;FS=0.437;HRun=0;HaplotypeScore=116.5721;InbreedingCoeff=0.9881;MQ=83.39;MQ0=0;MQRankSum=-13.958;QD=19.86;ReadPosRankSum=3.696;VQSLOD=3.8096;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,117,1801	0/0:18,0:18:54.15:0,54,853	0/0:19,0:19:45.04:0,45,797	0/0:14,0:14:36.12:0,36,557	1/1:1,12:13:21.09:172,21,0	0/0:22,0:22:63.22:0,63,1027	0/0:26,0:26:78.27:0,78,1267	1/1:1,7:8:21.01:206,21,0	0/0:23,0:23:69.24:0,69,1113	1/1:1,8:9:26.62:235,27,0	1/1:0,12:12:32.88:282,33,0	0/0:25,0:25:75.24:0,75,1188	0/0:25,0:25:72.23:0,72,1148	1/1:0,14:14:41.83:325,42,0	0/0:25,0:25:75.26:0,75,1218	0/0:20,0:20:57.19:0,57,930	1/1:0,10:10:29.91:236,30,0	1/1:0,3:3:8.96:75,9,0	0/0:11,0:11:33.11:0,33,538	0/0:19,0:19:57.19:0,57,930	0/0:21,0:21:60.20:0,60,979	0/0:16,0:16:48.16:0,48,778	0/0:16,0:16:48.14:0,48,735	0/0:22,0:22:66.21:0,66,1048	1/1:2,8:10:21.17:188,21,0	1/1:0,8:8:21:189,21,0	0/0:27,0:27:81.28:0,81,1309	1/1:0,8:8:23.91:198,24,0
chr10	49441026	.	AT	A	1919.26	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=14.849;DP=498;FS=0.422;HRun=1;HaplotypeScore=109.7641;InbreedingCoeff=0.9882;MQ=83.04;MQ0=0;MQRankSum=-13.723;QD=19.39;ReadPosRankSum=2.732;VQSLOD=3.9743;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,120,1910	0/0:20,0:20:60.16:0,60,909	0/0:20,0:20:60.16:0,60,888	0/0:15,0:15:42.14:0,42,637	1/1:1,12:13:20.59:150,21,0	0/0:22,0:22:66.22:0,66,1047	0/0:27,0:27:81.25:0,81,1248	1/1:1,7:8:24.02:222,24,0	0/0:25,0:25:75.19:0,75,1081	1/1:1,8:9:26.86:232,27,0	1/1:1,12:13:35.21:239,35,0	0/0:24,0:24:72.20:0,72,1081	0/0:24,0:24:69.24:0,69,1103	1/1:2,14:16:47.85:383,48,0	0/0:26,0:26:78.27:0,78,1239	0/0:21,0:21:63.21:0,63,1007	1/1:0,10:10:29.54:228,30,0	1/1:0,3:3:8.60:64,9,0	0/0:11,0:11:33.11:0,33,507	0/0:21,0:21:63.17:0,63,937	0/0:23,0:23:69.21:0,69,1077	0/0:16,0:16:48.16:0,48,767	0/0:16,0:16:48.16:0,48,760	0/0:22,0:22:66.23:0,66,1055	1/1:3,8:11:32.70:261,33,0	1/1:0,8:8:20.98:180,21,0	0/0:26,0:26:78.25:0,78,1222	1/1:0,8:8:23.20:178,23,0
chr10	49441792	.	T	TG	2604.72	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-10.384;DP=637;FS=4.814;HRun=7;HaplotypeScore=84.8481;InbreedingCoeff=0.9976;MQ=66.94;MQ0=5;MQRankSum=-0.263;QD=21.71;ReadPosRankSum=-0.814;VQSLOD=2.9592;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,117,1128	0/0:13,0:12:34.10:0,34,175	0/0:38,0:27:40.11:0,40,475	0/0:41,0:34:61.22:0,61,519	0/0:17,0:17:45.07:0,45,434	0/0:26,0:26:37.54:0,38,116	0/0:22,0:22:31.67:0,32,112	1/1:4,23:27:53.69:632,54,0	0/0:24,0:24:42.77:0,43,146	0/0:19,0:19:54.09:0,54,521	0/0:9,0:9:24.04:0,24,232	0/0:20,0:20:51.08:0,51,492	0/0:12,0:12:33.05:0,33,319	0/0:17,0:17:39.04:0,39,370	0/0:22,0:22:53.38:0,53,269	0/0:22,0:22:57.97:0,58,321	0/0:36,0:36:99:0,102,976	0/0:21,0:21:52.32:0,52,494	1/1:2,14:14:30.08:362,30,0	1/1:2,20:22:51.16:615,51,0	1/1:11,19:28:23.78:555,24,0	0/0:11,0:11:24.04:0,24,232	0/0:13,0:13:33.04:0,33,313	0/0:42,0:42:99:0,111,1070	0/0:15,0:15:39.06:0,39,376	0/0:25,0:25:48.07:0,48,463	1/1:3,22:24:51.16:615,51,0	0/0:8,0:9:24.04:0,24,232
chr10	49441796	.	GGGGCT	G	1121.09	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=10.153;DP=613;FS=1.154;HRun=0;HaplotypeScore=130.6140;InbreedingCoeff=0.9234;MQ=67.96;MQ0=5;MQRankSum=-2.839;QD=16.49;ReadPosRankSum=2.374;VQSLOD=2.9878;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,135,4013	0/0:13,0:12:36.12:0,36,1145	0/0:33,0:24:63.15:0,63,1722	0/0:34,1:28:56.56:0,57,1760	0/0:18,0:18:54.19:0,54,1575	1/1:22,2:24:38.03:480,38,0	1/1:18,3:21:3.48:316,3,0	0/0:27,0:27:69.22:0,69,1420	1/1:21,2:23:11.22:454,11,0	0/0:21,0:21:60.21:0,60,1822	0/0:8,0:8:24.08:0,24,767	0/0:20,0:20:57.18:0,57,1728	0/0:12,0:12:36.12:0,36,1096	0/0:14,0:14:42.14:0,42,1282	0/0:23,0:23:63.22:0,63,1887	0/0:23,0:23:66.23:0,66,2062	0/0:35,0:35:99:0,102,3225	0/0:22,0:22:60.21:0,60,1848	0/0:17,0:15:39.61:0,40,907	0/0:20,0:20:60.21:0,60,1441	0/0:27,0:25:69.20:0,69,1560	0/0:10,0:10:30.09:0,30,848	0/0:13,0:13:39.13:0,39,1191	0/0:40,0:40:99:0,117,3479	0/0:15,0:15:42.14:0,42,1285	0/0:19,0:19:57.17:0,57,1641	0/0:24,0:23:57.19:0,57,1290	0/0:9,0:9:27.09:0,27,818
chr10	49441798	.	GGCT	G	2213.58	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.438;DP=603;FS=1.155;HRun=0;HaplotypeScore=101.4320;InbreedingCoeff=0.9983;MQ=69.68;MQ0=5;MQRankSum=-5.033;QD=33.04;ReadPosRankSum=1.740;VQSLOD=3.8844;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,135,2826	0/0:13,0:12:36.12:0,36,792	0/0:30,0:23:56.89:0,57,1062	0/0:34,0:28:56.93:0,57,1140	0/0:18,0:18:51.14:0,51,1023	1/1:2,21:23:54.17:848,54,0	1/1:5,16:21:39.13:632,39,0	0/0:28,0:28:60.19:0,60,908	1/1:4,19:23:54.18:877,54,0	0/0:21,0:21:60.20:0,60,1250	0/0:8,0:8:24.08:0,24,529	0/0:19,0:19:54.19:0,54,1165	0/0:12,0:12:33.11:0,33,726	0/0:15,0:15:42.14:0,42,906	0/0:21,0:21:60.21:0,60,1280	0/0:22,0:22:66.23:0,66,1434	0/0:36,0:36:99:0,105,2232	0/0:20,0:20:60.21:0,60,1303	0/0:18,0:16:39.13:0,39,593	0/0:20,0:20:57.19:0,57,886	0/0:26,0:24:63.18:0,63,956	0/0:9,0:9:27.09:0,27,577	0/0:14,0:14:42.14:0,42,892	0/0:39,0:39:99:0,108,2342	0/0:14,0:14:42.14:0,42,900	0/0:18,0:18:51.17:0,51,1086	0/0:25,0:24:54.17:0,54,787	0/0:9,0:9:27.08:0,27,541
chr10	49442530	.	AAAGCAAGC	A	2942.83	PASS	AB=0.893;AC=17;AF=0.340;AN=50;BaseQRankSum=6.806;DP=721;FS=0.000;HRun=0;HaplotypeScore=209.8729;InbreedingCoeff=0.8711;MQ=65.01;MQ0=2;MQRankSum=-9.778;QD=13.62;ReadPosRankSum=1.126;VQSLOD=2.6431;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:57.18:0,57,2179	0/0:14,0:14:13.74:0,14,332	./.	./.	0/0:12,0:12:21.01:0,21,571	0/0:29,0:29:39.10:0,39,1032	0/0:30,0:29:26.98:0,27,669	0/1:22,0:25:0:0,0,0	0/0:22,0:27:36.11:0,36,1053	0/0:22,0:22:18.06:0,18,581	0/0:18,0:18:24.07:0,24,806	1/1:19,12:31:32.95:649,33,0	1/1:10,14:24:39:791,39,0	0/0:36,0:36:54.17:0,54,1685	0/0:27,0:27:39.13:0,39,1052	1/1:24,13:36:50.99:944,51,0	0/0:33,0:33:48.15:0,48,1584	0/0:17,0:17:24.08:0,24,842	1/1:12,0:16:6.02:112,6,0	./.	1/1:17,0:24:3.01:56,3,0	1/1:13,7:20:20.74:239,21,0	1/1:16,3:19:8.83:54,9,0	0/0:22,10:32:1.04:0,1,3	0/0:16,0:16:27.09:0,27,889	0/0:32,0:32:48.08:0,48,1531	1/1:11,0:20:15.05:279,15,0	0/0:14,0:14:21.07:0,21,741
chr10	49442578	.	C	CGAAGT	713.48	PASS	AB=0.813;AC=7;AF=0.125;AN=56;BaseQRankSum=0.412;DP=760;FS=1.049;HRun=0;HaplotypeScore=203.4025;InbreedingCoeff=0.0871;MQ=61.56;MQ0=7;MQRankSum=1.609;QD=4.49;ReadPosRankSum=-4.107;VQSLOD=1.7800;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,129,2771	0/1:1,0:12:77.09:94,0,77	0/0:22,0:13:29.16:0,29,628	0/0:25,0:19:47.74:0,48,936	0/1:19,0:19:18.39:18,0,337	0/0:33,0:33:78.66:0,79,1523	0/0:24,0:23:65:0,65,1095	0/0:16,0:16:40.22:0,40,246	0/0:25,0:25:17.06:0,17,991	0/0:33,0:33:61.69:0,62,574	0/0:26,0:26:25.14:0,25,537	0/0:27,0:27:74.03:0,74,534	0/0:36,0:37:70.41:0,70,613	1/1:2,0:40:3.39:571,3,0	0/1:7,1:44:99:103,0,343	0/0:28,0:28:73.50:0,74,529	0/0:31,0:31:44.35:0,44,809	0/0:20,0:20:33.43:0,33,473	0/0:22,0:21:34.76:0,35,280	0/0:23,0:23:7.59:0,8,182	0/0:30,0:30:25.45:0,25,327	0/0:26,0:26:46.83:0,47,433	0/0:28,0:28:49.47:0,49,428	0/1:31,0:31:42.96:43,0,197	0/0:19,0:19:7.74:0,8,428	0/0:43,0:43:52.14:0,52,855	0/0:19,0:19:41.61:0,42,331	0/1:13,0:13:9.09:9,0,320
chr10	49443026	.	ATTC	A	1525	PASS	AC=4;AF=0.074;AN=54;BaseQRankSum=3.270;DP=753;FS=0.000;HRun=0;HaplotypeScore=115.3363;InbreedingCoeff=0.9473;MQ=55.81;MQ0=20;MQRankSum=0.486;QD=35.47;ReadPosRankSum=0.827;VQSLOD=4.3171;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:78.27:0,78,1777	1/1:1,14:14:33.04:501,33,0	./.	0/0:20,0:4:6.02:0,6,99	0/0:29,0:28:84.29:0,84,1916	0/0:25,0:25:75.26:0,75,1684	0/0:34,0:32:87.30:0,87,1955	0/0:43,0:27:75.25:0,75,1688	0/0:27,0:27:78.27:0,78,1776	0/0:40,0:39:99:0,117,2617	0/0:19,0:19:54.19:0,54,1226	0/0:28,0:28:84.29:0,84,1893	0/0:27,0:27:78.27:0,78,1777	0/0:24,0:24:72.25:0,72,1619	1/1:1,27:27:69.19:1145,69,0	0/0:26,0:26:78.27:0,78,1778	0/0:33,0:32:93.32:0,93,2081	0/0:45,0:45:99:0,135,2918	0/0:20,0:18:51.12:0,51,1126	0/0:29,0:29:81.02:0,81,1836	0/0:21,0:21:60.21:0,60,1357	0/0:29,0:29:81.11:0,81,1848	0/0:29,0:29:84.09:0,84,1915	0/0:29,0:28:81.26:0,81,1776	0/0:22,0:22:66.22:0,66,1477	0/0:23,0:21:63.22:0,63,1453	0/0:31,0:30:90.31:0,90,2034	0/0:10,0:8:24.08:0,24,553
chr10	49443390	.	A	AT	14386.01	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-7.757;DP=590;FS=3.093;HRun=7;HaplotypeScore=48.5209;InbreedingCoeff=0.8398;MQ=59.39;MQ0=7;MQRankSum=3.483;QD=26.59;ReadPosRankSum=-1.166;VQSLOD=5.0073;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:93.09:0,93,879	1/1:1,16:16:39.12:471,39,0	0/0:9,0:2:4.56:0,5,32	0/0:7,0:3:1:0,1,41	1/1:6,19:25:53.91:579,54,0	1/1:2,24:26:60.18:725,60,0	1/1:5,10:15:27.08:326,27,0	1/1:8,22:28:66.14:740,66,0	1/1:4,17:21:42.10:486,42,0	1/1:1,24:24:72.17:824,72,0	1/1:3,26:29:72.10:833,72,0	1/1:2,12:14:27.08:326,27,0	1/1:2,9:11:27.08:325,27,0	1/1:5,19:22:51.16:616,51,0	1/1:4,20:24:51.10:598,51,0	1/1:5,21:25:48.15:580,48,0	1/1:3,20:23:51.16:616,51,0	1/1:2,17:19:42.11:494,42,0	1/1:4,20:19:51.12:582,51,0	1/1:3,27:30:78.13:897,78,0	1/1:3,13:16:30.09:362,30,0	1/1:3,19:22:22.19:534,22,0	1/1:4,11:16:33.49:377,33,0	1/1:2,10:12:24.07:290,24,0	1/1:1,28:30:78.20:926,78,0	1/1:2,31:33:93.22:1083,93,0	1/1:0,22:22:54.17:652,54,0	1/1:2,4:6:12.04:145,12,0
chr10	49445077	.	T	TG	29341.95	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=10.676;DP=726;FS=8.485;HRun=0;HaplotypeScore=196.2717;InbreedingCoeff=0.9999;MQ=82.62;MQ0=0;MQRankSum=-8.150;QD=45.42;ReadPosRankSum=4.128;VQSLOD=2.8359;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,105,1467	1/1:0,14:14:42.14:671,42,0	0/0:21,0:21:49.90:0,50,785	0/0:23,0:23:57.17:0,57,766	1/1:1,31:32:93.32:1486,93,0	1/1:1,28:29:84.29:1342,84,0	1/1:2,16:18:48.16:767,48,0	1/1:1,37:38:99:1786,114,0	1/1:0,23:23:63.21:1005,63,0	1/1:1,35:36:99:1716,108,0	1/1:2,21:23:60.20:958,60,0	1/1:0,17:17:48.16:767,48,0	1/1:0,20:20:54.18:863,54,0	1/1:0,22:22:66.23:1055,66,0	1/1:0,44:44:99:2110,132,0	1/1:1,23:24:60.20:959,60,0	1/1:0,22:22:63.21:1007,63,0	1/1:0,15:15:42.14:671,42,0	1/1:2,19:21:60.20:959,60,0	1/1:2,38:40:99:1822,114,0	1/1:1,16:17:48.16:767,48,0	1/1:2,26:28:75.26:1199,75,0	1/1:2,26:28:75.26:1198,75,0	1/1:1,18:20:57.17:885,57,0	1/1:0,23:23:63.21:1007,63,0	1/1:0,34:34:99:1607,102,0	1/1:1,46:47:99:2206,138,0	1/1:0,11:11:33.11:527,33,0
chr10	49445441	.	A	ATTTG	23243.93	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=1.078;DP=640;FS=9.119;HRun=0;HaplotypeScore=134.7242;InbreedingCoeff=0.9715;MQ=62.55;MQ0=1;MQRankSum=-4.963;QD=40.49;ReadPosRankSum=2.311;VQSLOD=5.0165;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:63.19:0,63,1178	1/1:1,0:14:31.55:508,32,0	0/0:17,0:14:29.74:0,30,390	0/0:21,0:18:23.53:0,24,443	1/1:4,23:28:47.95:979,48,0	1/1:19,0:19:51.16:638,51,0	1/1:17,1:18:36.11:510,36,0	1/1:3,24:32:89.83:1340,90,0	1/1:15,1:16:39.12:521,39,0	1/1:2,30:33:87.05:1807,87,0	1/1:1,22:24:54.01:1210,54,0	1/1:1,0:19:24.06:455,24,0	1/1:3,0:25:42.24:833,42,0	1/1:2,19:21:26.56:740,27,0	1/1:0,1:30:57.20:1074,57,0	1/1:1,19:21:51.18:1265,51,0	1/1:1,13:14:27.09:672,27,0	1/1:2,18:20:48.16:1154,48,0	1/1:6,17:27:66.93:1091,67,0	1/1:5,30:36:78.09:1676,78,0	1/1:2,9:11:17.84:383,18,0	1/1:3,1:28:54.17:1007,54,0	1/1:1,1:21:21.07:397,21,0	1/1:1,1:14:8.94:116,9,0	1/1:5,14:20:27.09:580,27,0	1/1:1,32:36:93.16:1937,93,0	1/1:8,29:38:74.98:1680,75,0	1/1:0,9:9:27.09:673,27,0
chr10	49445442	.	T	TTTG	16049.14	PASS	AB=0.973;AC=49;AF=0.875;AN=56;BaseQRankSum=1.814;DP=625;FS=2.204;HRun=0;HaplotypeScore=149.5181;InbreedingCoeff=0.7822;MQ=61.30;MQ0=1;MQRankSum=-5.223;QD=28.61;ReadPosRankSum=5.763;VQSLOD=5.2223;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:70.42:0,70,1115	1/1:14,0:14:23.77:367,24,0	0/0:17,0:14:30.67:0,31,375	0/0:21,0:16:27.40:0,27,443	1/1:23,1:24:44.04:566,44,0	1/1:1,18:19:51.17:1055,51,0	1/1:6,15:21:42.12:812,42,0	1/1:32,0:32:52.12:861,52,0	1/1:1,15:16:39.13:783,39,0	1/1:32,0:32:62.14:1048,62,0	1/1:23,0:23:54:730,54,0	1/1:19,0:19:23.96:341,24,0	1/1:24,0:24:42.23:622,42,0	1/1:20,0:20:13.94:406,14,0	1/1:29,0:29:57.19:801,57,0	1/1:24,0:24:51.12:722,51,0	1/1:12,0:12:27.09:385,27,0	1/1:19,0:19:46.94:644,47,0	1/1:25,2:27:37.47:758,37,0	0/1:35,1:36:11.30:911,0,11	1/1:10,0:10:17.84:224,18,0	1/1:26,0:26:36.52:735,37,0	1/1:19,0:19:4.41:277,4,0	1/1:13,0:13:8.94:93,9,0	1/1:19,1:20:17.82:372,18,0	1/1:36,0:36:53.52:1114,54,0	1/1:34,3:37:34.29:1036,34,0	1/1:9,0:9:27.09:385,27,0
chr10	49445444	.	T	TG	4435.63	PASS	AB=0.997;AC=39;AF=0.696;AN=56;BaseQRankSum=8.696;DP=601;FS=5.042;HRun=0;HaplotypeScore=162.5891;InbreedingCoeff=0.0634;MQ=60.62;MQ0=1;MQRankSum=-5.940;QD=8.24;ReadPosRankSum=9.296;VQSLOD=3.8479;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:75.15:0,75,963	1/1:14,0:14:4.37:96,4,0	0/0:15,0:12:14.37:0,14,275	0/0:21,0:16:37.80:0,38,407	0/1:24,0:24:48.56:160,0,49	1/1:19,0:19:48.48:246,48,0	1/1:17,1:18:8.32:143,8,0	0/1:29,1:30:83.69:275,0,84	1/1:16,0:16:36.87:184,37,0	0/1:30,0:30:11.22:287,0,11	1/1:20,0:20:45.45:228,45,0	1/1:18,0:18:22.68:110,23,0	1/1:22,2:24:37.52:188,38,0	0/1:20,0:20:7.43:109,0,7	1/1:27,0:27:52.99:252,53,0	0/1:25,0:25:66.73:173,0,67	1/1:12,0:12:25.57:127,26,0	0/1:20,0:20:19.23:159,0,19	0/1:22,0:22:22:203,0,22	0/1:36,0:36:73.44:254,0,73	1/1:9,0:9:17.06:87,17,0	1/1:26,0:26:5.23:191,5,0	1/1:19,0:19:12.15:85,12,0	1/1:10,0:10:7.14:40,7,0	0/1:19,0:19:7.93:83,0,8	0/1:37,0:37:52.31:367,0,52	0/1:34,0:34:1.18:262,0,1	1/1:9,0:9:25.57:127,26,0
chr10	49445848	.	T	TATGG	9744.68	PASS	AB=0.733;AC=41;AF=0.759;AN=54;BaseQRankSum=4.389;DP=574;FS=2.035;HRun=0;HaplotypeScore=259.2139;InbreedingCoeff=0.1693;MQ=50.68;MQ0=3;MQRankSum=-7.072;QD=19.65;ReadPosRankSum=-0.697;VQSLOD=4.0717;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:14:8.95:0,9,135	0/1:5,1:6:8.29:91,0,8	0/0:23,0:16:45.13:0,45,837	0/0:25,0:18:48.14:0,48,875	1/1:10,16:27:5.40:78,5,0	1/1:9,1:19:17.27:261,17,0	1/1:20,11:31:25.59:388,26,0	1/1:23,3:24:50.22:948,50,0	1/1:10,13:23:39.07:618,39,0	1/1:13,11:23:41.84:988,42,0	1/1:4,6:10:3.01:54,3,0	0/1:20,12:32:27.34:562,0,27	0/1:10,2:22:22.25:168,0,22	1/1:11,14:25:48.11:680,48,0	1/1:8,4:25:6.02:125,6,0	1/1:15,10:25:42.13:758,42,0	1/1:7,11:18:39.10:627,39,0	0/1:5,7:12:16.40:436,0,16	0/1:11,3:14:31.65:555,0,32	1/1:14,5:19:3.01:56,3,0	1/1:9,2:11:2.78:57,3,0	1/1:18,4:22:2.90:25,3,0	./.	0/1:16,11:27:67.76:80,0,68	1/1:14,12:26:21.07:364,21,0	1/1:14,20:34:44.27:1538,44,0	0/1:7,3:9:27.83:108,0,28	1/1:4,3:7:9.03:182,9,0
chr10	49445849	.	A	ATG	4811.20	PASS	AB=0.976;AC=39;AF=0.722;AN=54;BaseQRankSum=3.488;DP=538;FS=0.000;HRun=0;HaplotypeScore=244.8938;InbreedingCoeff=0.1931;MQ=50.39;MQ0=3;MQRankSum=-5.359;QD=10.60;ReadPosRankSum=1.914;VQSLOD=4.3779;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:15:9.45:0,9,111	0/0:6,0:6:6.78:0,7,39	0/0:23,0:16:45.11:0,45,662	0/0:24,0:17:49.26:0,49,685	1/1:26,0:26:6:60,6,0	1/1:17,0:17:10.35:123,10,0	1/1:28,2:30:7.57:180,8,0	0/1:19,1:18:14.53:331,0,15	1/1:22,1:23:39.05:438,39,0	1/1:22,1:22:31.98:505,32,0	1/1:8,0:9:3.01:34,3,0	0/1:29,0:29:16.28:319,0,16	0/1:18,0:18:32.25:32,0,60	1/1:21,1:22:37.55:308,38,0	1/1:24,0:24:5.31:34,5,0	1/1:21,3:24:41.72:522,42,0	1/1:17,0:17:30.81:351,31,0	0/1:12,0:12:22.02:202,0,22	0/1:10,1:10:82.79:100,0,83	1/1:17,0:17:2.85:36,3,0	1/1:12,0:13:3.01:37,3,0	1/1:21,0:21:2.99:25,3,0	./.	0/1:26,1:27:52.14:61,0,52	1/1:26,0:26:21.01:215,21,0	1/1:33,0:33:48.61:743,49,0	0/1:8,0:7:38.84:39,0,53	1/1:4,0:4:9:116,9,0
chr10	49445867	.	ATGCG	A	2962.04	PASS	AB=0.629;AC=42;AF=0.778;AN=54;BaseQRankSum=5.698;DP=393;FS=0.930;HRun=0;HaplotypeScore=186.4165;InbreedingCoeff=0.3903;MQ=37.71;MQ0=4;MQRankSum=-2.590;QD=8.64;ReadPosRankSum=5.355;VQSLOD=2.7819;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:12:11.99:0,12,274	1/1:4,0:7:9.03:126,9,0	0/0:12,0:3:4.04:0,4,12	0/0:13,0:8:11.35:0,11,114	1/1:10,9:22:2.33:19,2,0	1/1:4,1:11:3.09:57,3,0	1/1:8,1:18:6.33:171,6,0	1/1:16,0:16:24.33:265,24,0	1/1:9,2:17:3.31:15,3,0	1/1:15,4:19:30.15:387,30,0	0/1:3,4:8:0:0,0,0	1/1:4,2:21:15.93:231,16,0	1/1:8,1:13:20.99:256,21,0	1/1:1,10:18:24.64:167,25,0	1/1:9,0:13:4.18:40,4,0	1/1:4,4:13:0.99:34,1,0	1/1:1,6:10:20.51:192,21,0	0/1:2,5:9:21.17:137,0,21	0/1:6,0:5:48.44:64,0,48	0/1:13,0:19:0:0,0,0	0/1:1,0:14:0.03:0,0,0	0/1:1,2:14:0:0,0,0	./.	1/1:6,1:18:5.76:82,6,0	1/1:11,7:19:12:107,12,0	1/1:8,9:23:32.84:566,33,0	1/1:2,2:7:11.83:114,12,0	1/1:0,1:3:5.99:66,6,0
chr10	49445868	.	TGCGCGCGCGCGCGCAC	T	4915.24	PASS	AB=0.935;AC=32;AF=0.593;AN=54;BaseQRankSum=-2.997;DP=392;FS=7.758;HRun=0;HaplotypeScore=215.3071;InbreedingCoeff=-0.1265;MQ=39.69;MQ0=4;MQRankSum=-0.367;QD=15.36;ReadPosRankSum=-3.777;VQSLOD=1.8348;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:11:12.02:0,12,826	1/1:5,2:7:9.03:177,9,0	0/0:12,0:2:2.98:0,3,88	0/0:16,0:10:2.22:0,2,130	0/0:12,9:21:2.92:0,3,30	1/1:11,0:11:1.08:112,1,0	1/1:15,3:18:14.98:500,15,0	1/1:2,15:16:43.26:1196,43,0	0/1:12,5:17:22.10:22,0,47	1/1:5,14:18:33.71:831,34,0	1/1:5,3:8:0.47:1,0,0	0/1:20,1:21:52:132,0,52	0/1:13,0:13:23.78:361,0,24	0/1:17,1:18:99:257,0,159	0/1:13,0:13:8.84:48,0,9	1/1:13,0:13:1.44:90,1,0	0/1:10,0:10:56.36:188,0,56	0/1:9,0:9:7.04:37,0,7	1/1:8,0:5:14.86:108,15,0	1/1:6,13:19:0.47:1,0,0	0/1:15,0:14:0:0,0,0	0/1:14,0:14:0:0,0,0	./.	0/1:18,0:18:8.67:9,0,10	0/1:9,10:19:55.46:129,0,55	0/1:16,7:23:31.01:554,0,31	0/1:7,0:7:30.15:144,0,30	0/1:3,0:3:13.75:18,0,14
chr10	49445884	.	C	CACACAT	3801.35	PASS	AB=1.000;AC=43;AF=0.860;AN=50;BaseQRankSum=5.476;DP=441;FS=18.466;HRun=0;HaplotypeScore=212.9612;InbreedingCoeff=0.4705;MQ=47.41;MQ0=3;MQRankSum=-5.868;QD=10.83;ReadPosRankSum=4.667;VQSLOD=1.0239;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:17:30.41:0,30,606	1/1:5,0:6:9.03:169,9,0	0/1:18,0:10:6.01:6,0,246	0/0:14,0:11:21.90:0,22,307	1/1:21,0:21:2.19:10,2,0	1/1:11,0:11:3:25,3,0	1/1:21,0:21:17.52:212,18,0	1/1:16,0:16:41.80:454,42,0	1/1:16,0:17:3.01:91,3,0	1/1:21,0:20:41.75:410,42,0	./.	1/1:24,0:26:15.57:237,16,0	1/1:15,0:16:21.84:265,22,0	1/1:24,0:24:27.07:176,27,0	1/1:8,4:13:6.02:168,6,0	1/1:17,0:17:5.93:42,6,0	1/1:12,0:12:4.65:67,5,0	1/1:9,0:9:3.77:142,4,0	1/1:8,0:6:12.04:301,12,0	./.	0/0:19,0:18:0:0,0,0	1/1:18,0:18:5.70:50,6,0	./.	1/1:14,0:15:5.73:98,6,0	1/1:19,0:19:11.39:87,11,0	1/1:22,0:22:42.42:417,42,0	1/1:11,0:11:18.73:276,19,0	1/1:10,0:10:8.96:100,9,0
chr10	49446654	.	C	CTG	21801.91	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=9.338;DP=518;FS=9.888;HRun=0;HaplotypeScore=130.0907;InbreedingCoeff=0.9897;MQ=78.21;MQ0=0;MQRankSum=-8.614;QD=48.45;ReadPosRankSum=3.976;VQSLOD=4.9074;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,102,1538	1/1:0,8:8:24.08:461,24,0	0/0:16,0:16:48.03:0,48,600	0/0:17,0:17:43.46:0,43,601	1/1:3,20:23:51.16:946,51,0	1/1:3,25:28:75.26:1442,75,0	1/1:1,9:10:24.08:461,24,0	1/1:4,21:25:69.04:1149,69,0	1/1:5,16:21:48.15:889,48,0	1/1:8,18:26:72.07:1166,72,0	1/1:5,17:22:63.20:1157,63,0	1/1:0,12:12:30.10:576,30,0	1/1:4,14:18:42.13:762,42,0	1/1:2,16:18:51.17:972,51,0	1/1:2,19:21:60.19:1117,60,0	1/1:3,14:17:48.13:855,48,0	1/1:3,15:18:42.12:774,42,0	1/1:0,12:12:33.11:636,33,0	1/1:2,12:14:36.11:661,36,0	1/1:7,14:21:57.14:954,57,0	1/1:1,15:16:39.13:752,39,0	1/1:0,18:18:54.19:1037,54,0	1/1:4,19:23:54.17:1005,54,0	1/1:0,7:7:18.06:324,18,0	1/1:2,19:21:63.21:1174,63,0	1/1:3,14:17:42.13:776,42,0	1/1:3,26:29:78.25:1466,78,0	1/1:0,5:5:15.05:289,15,0
chr10	49446712	.	A	AG	10603.86	PASS	AB=0.625;AC=49;AF=0.875;AN=56;BaseQRankSum=6.516;DP=556;FS=3.825;HRun=0;HaplotypeScore=171.7563;InbreedingCoeff=0.8418;MQ=72.29;MQ0=0;MQRankSum=-8.824;QD=22.18;ReadPosRankSum=8.102;VQSLOD=4.9243;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,120,1674	1/1:2,0:9:15.52:75,16,0	0/0:21,0:21:59.19:0,59,754	0/0:16,0:15:36.10:0,36,469	1/1:3,21:24:54.36:608,54,0	1/1:3,1:18:37.94:186,38,0	1/1:3,0:18:29.51:126,30,0	1/1:2,29:31:79.42:851,79,0	1/1:3,1:22:51.66:257,52,0	1/1:4,21:25:67.37:706,67,0	1/1:4,18:22:43.01:489,43,0	1/1:4,8:12:24.50:267,24,0	1/1:1,15:16:39.65:447,40,0	1/1:4,17:21:45.55:508,46,0	1/1:3,0:21:35.77:163,36,0	1/1:2,1:21:47.82:226,48,0	1/1:1,15:16:42.46:439,42,0	1/1:2,8:10:23.32:232,23,0	1/1:3,10:13:25.67:335,26,0	1/1:1,34:36:99:1099,108,0	1/1:1,7:8:19.46:226,19,0	1/1:4,20:24:59.87:615,60,0	1/1:2,17:19:40.03:454,40,0	0/1:2,3:5:9.85:97,0,10	1/1:1,26:26:75.88:796,76,0	1/1:5,22:27:62.34:662,62,0	1/1:8,16:24:50.80:542,51,0	1/1:4,5:9:21.36:199,21,0
chr10	49446820	.	ATTT	A	15473.71	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=12.888;DP=467;FS=30.607;HRun=4;HaplotypeScore=189.3105;InbreedingCoeff=0.9725;MQ=66.89;MQ0=0;MQRankSum=-13.543;QD=40.83;ReadPosRankSum=3.442;VQSLOD=2.1625;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,129,2816	1/1:0,13:13:27.09:458,27,0	0/0:22,0:22:66.19:0,66,1422	0/0:23,0:22:66.20:0,66,1250	1/1:3,15:18:18.06:312,18,0	1/1:0,19:19:51.17:894,51,0	1/1:1,7:8:15.05:259,15,0	1/1:1,26:27:78.27:1373,78,0	1/1:1,17:18:45.09:756,45,0	1/1:1,12:13:33.07:548,33,0	1/1:0,9:9:18.06:316,18,0	1/1:0,13:13:39.13:686,39,0	1/1:2,13:15:39.13:686,39,0	1/1:1,11:12:30.10:528,30,0	1/1:1,21:22:60.21:1041,60,0	1/1:1,15:16:39.13:686,39,0	1/1:0,13:13:33.11:580,33,0	1/1:0,7:7:18.06:317,18,0	1/1:2,13:15:42.12:709,42,0	1/1:4,17:21:39.07:651,39,0	1/1:0,16:16:29.58:492,30,0	1/1:1,11:12:24.08:419,24,0	1/1:1,10:11:24.01:387,24,0	1/1:1,8:9:12.04:208,12,0	1/1:2,22:24:63.22:1106,63,0	1/1:1,11:12:27.09:476,27,0	1/1:0,17:17:48.16:844,48,0	1/1:0,19:19:42.14:740,42,0
chr10	49447033	.	G	GA	32068.57	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=6.474;DP=824;FS=1.277;HRun=0;HaplotypeScore=153.9917;InbreedingCoeff=0.9999;MQ=75.25;MQ0=0;MQRankSum=-7.689;QD=44.35;ReadPosRankSum=4.425;VQSLOD=3.9588;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,132,1823	1/1:0,16:16:48.16:767,48,0	0/0:28,0:27:81.24:0,81,1108	0/0:29,0:29:81.21:0,81,1067	1/1:0,30:30:87.30:1390,87,0	1/1:2,25:27:72.25:1150,72,0	1/1:0,30:30:87.30:1390,87,0	1/1:1,31:32:93.28:1419,93,0	1/1:1,37:38:99:1677,105,0	1/1:2,33:35:99:1628,102,0	1/1:1,20:21:57.19:911,57,0	1/1:1,31:32:87.29:1375,87,0	1/1:2,32:34:93.27:1457,93,0	1/1:1,26:27:63.21:1006,63,0	1/1:0,36:36:99:1678,105,0	1/1:1,35:36:96.33:1533,96,0	1/1:0,31:31:78.27:1247,78,0	1/1:1,12:13:36.12:575,36,0	1/1:0,14:14:42.12:647,42,0	1/1:0,32:32:90.31:1437,90,0	1/1:0,39:39:99:1775,111,0	1/1:0,33:33:93.32:1485,93,0	1/1:0,35:35:99:1627,102,0	1/1:1,35:36:99:1631,102,0	1/1:0,21:21:60.20:959,60,0	1/1:0,30:30:87.30:1390,87,0	1/1:0,28:28:78.27:1246,78,0	1/1:0,17:17:42.14:671,42,0
chr10	49448198	.	G	GCCTCTTAT	61167.82	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-6.855;DP=726;FS=15.176;HRun=0;HaplotypeScore=154.6472;InbreedingCoeff=0.9920;MQ=64.43;MQ0=0;MQRankSum=-12.976;QD=94.83;ReadPosRankSum=0.185;VQSLOD=4.7367;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,141,3766	1/1:1,11:15:39.13:1523,39,0	0/0:16,0:16:42.11:0,42,1019	0/0:14,0:14:27.04:0,27,566	1/1:6,22:30:78.18:2717,78,0	1/1:5,23:30:81.28:3492,81,0	1/1:8,15:26:60.20:2319,60,0	1/1:17,10:35:90.23:2850,90,0	1/1:14,14:30:72.21:2768,72,0	1/1:9,11:20:54.18:2190,54,0	1/1:5,18:28:69.19:2250,69,0	1/1:7,25:33:81.28:3268,81,0	1/1:7,21:32:87.26:3478,87,0	1/1:7,9:17:45.15:1841,45,0	1/1:7,26:37:93.32:3830,93,0	1/1:6,20:28:69.24:2935,69,0	1/1:6,5:18:27.05:968,27,0	1/1:2,4:7:15.05:564,15,0	1/1:10,6:18:39.01:1508,39,0	1/1:9,37:48:99:5120,135,0	1/1:7,10:20:36.92:1263,37,0	1/1:8,21:31:72.67:2854,73,0	1/1:2,13:16:39.13:1614,39,0	1/1:7,13:25:23.69:939,24,0	1/1:6,19:28:72.16:2705,72,0	1/1:3,22:31:93.30:3561,93,0	1/1:9,24:34:93.32:3779,93,0	1/1:5,3:8:24.04:832,24,0
chr10	49450472	.	GAACAGTCAGAGGATGGACCCAGT	G	8456.82	PASS	AC=38;AF=0.864;AN=44;BaseQRankSum=8.108;DP=126;FS=22.340;HRun=0;HaplotypeScore=99.2570;InbreedingCoeff=0.5080;MQ=64.21;MQ0=0;MQRankSum=-7.471;QD=145.81;ReadPosRankSum=4.360;VQSLOD=2.6228;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:69.24:0,69,6430	1/1:0,7:7:18.06:1171,18,0	0/0:23,0:22:66.23:0,66,4880	0/0:20,0:19:57.20:0,57,4665	1/1:0,0:3:9.03:445,9,0	./.	1/1:0,3:3:3.01:196,3,0	1/1:0,3:2:5.99:90,6,0	1/1:0,2:2:6.02:391,6,0	1/1:0,0:1:3.01:112,3,0	1/1:0,2:3:6.02:365,6,0	./.	1/1:0,3:3:9.03:587,9,0	1/1:0,2:3:6.02:365,6,0	1/1:0,0:1:3.01:169,3,0	1/1:0,5:4:12.04:782,12,0	./.	1/1:0,0:1:3.01:173,3,0	./.	1/1:1,6:7:20.99:994,21,0	./.	1/1:0,4:4:12.04:782,12,0	1/1:1,3:5:15.05:934,15,0	1/1:0,2:2:3.01:196,3,0	1/1:0,0:2:6.02:339,6,0	./.	1/1:0,2:2:3.01:196,3,0	1/1:0,0:1:3.01:171,3,0
chr10	49450477	.	GTCAGAGGATGGACCCAGT	G	5836.13	PASS	AC=38;AF=0.864;AN=44;BaseQRankSum=8.710;DP=123;FS=19.492;HRun=0;HaplotypeScore=99.4373;InbreedingCoeff=0.4998;MQ=64.99;MQ0=0;MQRankSum=-7.419;QD=100.62;ReadPosRankSum=4.006;VQSLOD=3.0592;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:63.22:0,63,4942	1/1:7,0:7:18.06:770,18,0	0/0:23,0:22:66.20:0,66,4185	0/0:21,0:20:60.19:0,60,4184	1/1:0,3:3:9.03:356,9,0	./.	1/1:3,0:3:3.01:129,3,0	1/1:3,0:2:3.87:24,4,0	1/1:2,0:2:6.02:257,6,0	1/1:0,1:1:3.01:83,3,0	1/1:2,1:3:6.02:268,6,0	./.	1/1:3,0:3:9.03:386,9,0	1/1:2,1:3:6.02:268,6,0	1/1:1,0:1:3.01:139,3,0	1/1:5,0:4:12.04:515,12,0	./.	1/1:0,1:1:3.01:143,3,0	./.	1/1:7,0:7:20.99:682,21,0	./.	1/1:4,0:4:12.04:515,12,0	1/1:5,0:5:15.05:623,15,0	1/1:2,0:2:3.01:129,3,0	1/1:0,2:2:6.02:279,6,0	./.	1/1:2,0:2:3.01:129,3,0	1/1:0,1:1:3.01:142,3,0
chr10	49450656	.	GGA	G	39.70	PASS	AB=0.914;AC=36;AF=0.667;AN=54;BaseQRankSum=0.312;DP=215;FS=25.734;HRun=0;HaplotypeScore=46.0605;InbreedingCoeff=0.3828;MQ=79.64;MQ0=11;MQRankSum=0.765;QD=0.30;ReadPosRankSum=4.108;VQSLOD=0.2374;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:4:12.03:0,12,140	1/1:2,0:2:2.29:6,2,0	0/0:15,0:8:23.19:0,23,259	0/0:24,0:13:14:0,14,242	./.	1/1:9,1:10:2.77:9,3,0	0/1:8,1:9:5.95:6,0,16	0/1:12,1:13:5.43:5,0,20	1/1:9,0:9:5.80:26,6,0	1/1:5,1:6:2.86:10,3,0	1/1:7,0:7:5.49:33,5,0	1/1:6,0:6:2.44:6,2,0	1/1:3,0:3:2.18:7,2,0	1/1:8,0:8:2.80:10,3,0	1/1:5,0:5:2.73:13,3,0	1/1:6,0:6:2.38:9,2,0	0/0:11,0:9:12.14:0,12,82	0/0:11,0:10:4.39:0,4,24	1/1:9,0:8:5.35:14,5,0	1/1:3,0:3:0.87:2,1,0	1/1:3,0:3:0.47:1,0,0	1/1:6,0:6:0.47:1,0,0	0/0:3,0:3:0:0,0,0	0/0:3,0:3:0:0,0,0	1/1:6,0:6:0.45:1,0,0	1/1:8,0:7:0.26:1,0,0	1/1:12,0:11:2.01:11,2,0	0/0:2,0:2:0:0,0,0
chr10	49451259	.	T	TAGGAAAG	12761.85	PASS	AC=48;AF=0.889;AN=54;BaseQRankSum=6.380;DP=199;FS=0.000;HRun=0;HaplotypeScore=97.8896;InbreedingCoeff=0.6699;MQ=87.08;MQ0=0;MQRankSum=-5.964;QD=85.65;ReadPosRankSum=1.288;VQSLOD=5.6468;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:78.14:0,78,1989	1/1:2,7:9:21.07:684,21,0	0/0:11,0:11:24.04:0,24,481	0/0:10,0:10:18.25:0,18,253	1/1:1,9:10:30.09:921,30,0	1/1:0,2:2:6.02:199,6,0	1/1:1,7:8:21.07:674,21,0	1/1:2,6:8:18.03:561,18,0	1/1:1,3:5:12.04:386,12,0	1/1:1,6:7:18.02:554,18,0	1/1:0,10:12:32.70:953,33,0	1/1:2,1:3:3.01:99,3,0	1/1:0,1:1:3.01:102,3,0	1/1:0,4:4:12.04:398,12,0	1/1:1,2:3:6.02:196,6,0	1/1:0,2:2:6.02:188,6,0	1/1:1,2:3:9.03:255,9,0	1/1:0,2:2:6.02:221,6,0	1/1:1,2:3:9.03:335,9,0	1/1:0,9:9:27.09:881,27,0	1/1:0,1:1:3.01:125,3,0	1/1:2,11:13:39.13:1223,39,0	1/1:3,10:14:42.14:1207,42,0	1/1:0,5:5:12.04:407,12,0	1/1:1,9:13:36.12:1116,36,0	1/1:2,5:7:18.06:570,18,0	1/1:0,5:5:15.05:507,15,0	./.
chr10	49451261	.	ACTCC	A	4390.04	PASS	AC=48;AF=0.889;AN=54;BaseQRankSum=9.208;DP=186;FS=4.458;HRun=0;HaplotypeScore=113.0886;InbreedingCoeff=0.6485;MQ=89.64;MQ0=0;MQRankSum=-6.800;QD=32.52;ReadPosRankSum=3.313;VQSLOD=4.6156;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:72.25:0,72,1940	1/1:0,7:7:21.06:245,21,0	0/0:10,0:10:21.46:0,21,406	0/0:12,0:12:21.40:0,21,347	1/1:0,9:9:27.02:290,27,0	1/1:0,2:2:6.02:73,6,0	1/1:1,7:8:21.06:236,21,0	1/1:0,7:7:18.06:273,18,0	1/1:1,4:5:12.04:147,12,0	1/1:0,6:6:15.05:220,15,0	1/1:2,10:12:32.91:311,33,0	1/1:0,1:1:3.01:37,3,0	1/1:0,1:1:3.01:39,3,0	1/1:0,4:4:12.04:147,12,0	1/1:1,2:3:6.02:70,6,0	1/1:0,2:2:6.01:64,6,0	1/1:0,2:2:6.02:80,6,0	1/1:0,2:2:6.02:95,6,0	1/1:0,2:2:6.02:91,6,0	1/1:0,9:9:27.08:316,27,0	1/1:0,1:1:2.94:18,3,0	1/1:1,11:12:36.07:395,36,0	1/1:2,10:12:33.02:352,33,0	1/1:0,5:5:11.96:117,12,0	1/1:3,9:12:35.95:363,36,0	1/1:1,5:6:15.05:216,15,0	1/1:0,5:5:15.04:195,15,0	./.
chr10	49451315	.	A	AG	4297.83	PASS	AB=1.000;AC=54;AF=0.964;AN=56;BaseQRankSum=4.494;DP=316;FS=1.396;HRun=2;HaplotypeScore=263.1685;InbreedingCoeff=0.1316;MQ=62.25;MQ0=0;MQRankSum=-4.024;QD=13.60;ReadPosRankSum=3.102;VQSLOD=4.5382;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,14:16:35.98:194,36,0	1/1:0,8:8:23.22:131,23,0	0/1:7,0:7:4.21:4,0,20	0/1:10,0:9:18.94:19,0,30	1/1:0,14:14:24.94:116,25,0	1/1:1,8:9:22.55:133,23,0	1/1:0,10:10:28.90:160,29,0	1/1:1,7:8:20.86:151,21,0	1/1:0,10:10:24.67:126,25,0	1/1:0,12:12:32.04:213,32,0	1/1:1,12:13:18.51:95,19,0	1/1:1,17:18:46.06:285,46,0	1/1:0,16:16:38.68:198,39,0	1/1:0,14:14:37.47:203,37,0	1/1:0,18:18:51.53:268,52,0	1/1:0,16:16:46.33:257,46,0	1/1:0,3:3:5.80:32,6,0	1/1:0,4:4:11.91:95,12,0	1/1:0,9:9:20.88:155,21,0	1/1:0,21:21:59.44:299,59,0	1/1:0,1:1:2.90:16,3,0	1/1:0,9:9:19.76:100,20,0	1/1:0,20:20:35.86:226,36,0	1/1:0,7:7:13.83:66,14,0	1/1:0,17:17:47.81:257,48,0	1/1:0,18:18:53.35:359,53,0	1/1:0,6:6:17.78:123,18,0	1/1:0,2:2:2.96:19,3,0
chr10	49451321	.	AC	A	3589.76	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=5.407;DP=312;FS=10.828;HRun=2;HaplotypeScore=264.9798;InbreedingCoeff=0.6303;MQ=59.21;MQ0=0;MQRankSum=-4.173;QD=12.09;ReadPosRankSum=4.192;VQSLOD=1.4767;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,15:15:34.80:187,35,0	1/1:0,8:8:22.57:110,23,0	0/0:6,1:7:1.04:0,1,16	0/0:8,0:7:10.27:0,10,51	1/1:0,14:14:22.77:87,23,0	1/1:0,9:9:25.04:118,25,0	1/1:0,10:10:27.97:131,28,0	1/1:0,7:7:20.66:131,21,0	1/1:0,10:10:21.87:103,22,0	1/1:0,12:12:30.92:180,31,0	1/1:0,13:13:12.43:61,12,0	1/1:0,18:18:49.80:225,50,0	1/1:0,16:16:38.39:170,38,0	1/1:0,14:14:36.09:165,36,0	1/1:0,18:18:49.47:216,49,0	1/1:0,16:16:44.93:212,45,0	1/1:0,3:3:8.65:65,9,0	1/1:0,4:4:11.81:85,12,0	1/1:0,9:9:20.69:133,21,0	1/1:0,21:21:57.51:251,58,0	1/1:0,1:1:2.84:14,3,0	1/1:0,9:9:15.81:65,16,0	1/1:0,20:20:40.72:189,41,0	1/1:0,7:7:13.01:53,13,0	1/1:0,17:17:47.37:215,47,0	1/1:0,18:18:52.53:300,53,0	1/1:0,6:6:17.62:107,18,0	1/1:0,2:2:2.90:16,3,0
chr10	49451407	.	TC	T	9235.95	PASS	AC=52;AF=1.000;AN=52;DP=324;FS=0.000;HRun=2;HaplotypeScore=245.6184;InbreedingCoeff=-0.0138;MQ=28.64;MQ0=0;QD=28.51;VQSLOD=3.9967;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,19:21:38.96:468,39,0	1/1:2,2:4:6.02:77,6,0	./.	./.	1/1:0,5:5:6.02:77,6,0	1/1:1,13:14:38.79:442,39,0	1/1:0,18:18:50.95:626,51,0	1/1:1,13:14:32.94:400,33,0	1/1:0,10:10:29.88:339,30,0	1/1:0,17:17:48.15:614,48,0	1/1:1,7:8:9.03:116,9,0	1/1:1,16:17:41.92:497,42,0	1/1:0,10:10:26.87:315,27,0	1/1:2,17:19:47.45:565,47,0	1/1:2,18:20:47.77:563,48,0	1/1:0,15:15:38.91:456,39,0	1/1:1,13:14:29.87:359,30,0	1/1:0,7:7:21.02:249,21,0	1/1:0,6:6:18.06:232,18,0	1/1:2,9:11:27.09:348,27,0	1/1:1,12:13:17.84:196,18,0	1/1:0,7:7:18.06:229,18,0	1/1:2,10:12:27.09:348,27,0	1/1:0,10:10:8.78:91,9,0	1/1:1,13:14:32.94:398,33,0	1/1:2,15:17:39.13:501,39,0	1/1:0,14:14:39.13:498,39,0	1/1:0,6:6:18.06:232,18,0
chr10	49451785	.	ACTCATTTGATGCCACAGGAGCACAGTTAAGAGATGGC	A	33987.16	PASS	AC=48;AF=0.889;AN=54;BaseQRankSum=12.910;DP=457;FS=1.009;HRun=0;HaplotypeScore=458.3600;InbreedingCoeff=0.6818;MQ=91.07;MQ0=0;MQRankSum=-11.970;QD=99.09;ReadPosRankSum=8.150;VQSLOD=2.1760;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,157,20893	1/1:2,1:3:3.01:289,3,0	0/0:28,0:28:81.22:0,81,4648	0/0:24,0:24:69.24:0,69,4872	1/1:9,9:18:18.02:1227,18,0	1/1:13,8:21:21.07:2021,21,0	1/1:12,5:17:6.02:577,6,0	1/1:21,0:21:5.99:93,6,0	1/1:6,11:17:30.10:2887,30,0	1/1:11,13:24:33.06:2414,33,0	1/1:4,4:8:12:886,12,0	1/1:9,11:20:33.11:3176,33,0	1/1:7,7:14:24.08:2308,24,0	1/1:4,6:10:12.04:1155,12,0	1/1:13,3:16:6.02:577,6,0	1/1:5,12:17:36.12:3465,36,0	1/1:4,5:9:9.03:786,9,0	1/1:7,7:14:18.06:1733,18,0	1/1:6,2:8:6.02:341,6,0	1/1:9,8:17:18.02:1464,18,0	./.	1/1:9,13:22:39.09:3476,39,0	1/1:4,11:15:12.04:1155,12,0	1/1:5,2:7:6.02:440,6,0	1/1:8,7:15:15.05:1444,15,0	1/1:7,5:12:12.04:1155,12,0	1/1:10,4:14:9.03:866,9,0	1/1:4,0:4:3.01:51,3,0
chr10	49452579	.	ACTCTCT	A	21185.14	PASS	AB=0.556;AC=45;AF=0.804;AN=56;BaseQRankSum=5.243;DP=812;FS=7.563;HRun=0;HaplotypeScore=225.3411;InbreedingCoeff=0.7180;MQ=63.55;MQ0=5;MQRankSum=-13.517;QD=32.74;ReadPosRankSum=6.135;VQSLOD=3.4856;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:52:99:0,129,4099	1/1:0,12:12:30.10:657,30,0	0/0:38,0:26:57.66:0,58,1783	0/0:46,0:37:72.05:0,72,1754	1/1:9,26:35:30.06:611,30,0	1/1:4,19:23:51.17:1117,51,0	1/1:11,18:29:45.06:838,45,0	0/1:6,0:32:3.40:3,0,132	1/1:4,23:27:69.20:1466,69,0	1/1:7,27:34:72.23:1486,72,0	1/1:6,16:22:29.61:565,30,0	1/1:4,29:33:72.21:1523,72,0	1/1:5,27:32:75.22:1573,75,0	1/1:5,23:28:57.15:1203,57,0	1/1:10,31:40:81.17:1692,81,0	1/1:5,26:31:69.20:1440,69,0	1/1:10,16:26:27.09:592,27,0	1/1:6,14:20:36.12:789,36,0	0/0:16,0:28:13.11:0,13,201	0/1:6,0:35:9.86:10,0,59	0/1:6,0:25:2.92:3,0,110	1/1:8,22:30:54.18:1183,54,0	1/1:5,19:24:45.07:895,45,0	1/1:7,12:19:20.21:459,20,0	1/1:5,28:32:72.20:1503,72,0	1/1:2,23:25:69.18:1424,69,0	1/1:4,0:25:7.27:20,7,0	1/1:3,3:6:6.02:131,6,0
chr10	49453117	.	GT	G	1917.72	PASS	AB=1.000;AC=50;AF=0.926;AN=54;BaseQRankSum=-1.617;DP=98;FS=1.449;HRun=1;HaplotypeScore=24.8641;InbreedingCoeff=0.1608;MQ=94.75;MQ0=1;MQRankSum=-3.510;QD=19.98;ReadPosRankSum=2.615;VQSLOD=3.8926;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:2,0:2:6:0,6,69	1/1:0,2:2:3.01:42,3,0	0/1:9,0:7:3.11:3,0,120	0/1:16,0:8:2.63:3,0,112	1/1:0,1:1:3.01:39,3,0	1/1:0,4:4:6.02:83,6,0	1/1:0,7:7:15.05:206,15,0	1/1:0,4:4:12.03:150,12,0	1/1:0,4:4:12.04:164,12,0	1/1:1,1:2:2.90:16,3,0	1/1:1,0:1:3:25,3,0	1/1:0,4:4:12.04:163,12,0	1/1:0,3:3:6.02:84,6,0	1/1:0,1:1:3.01:41,3,0	1/1:0,3:3:9.03:125,9,0	1/1:0,1:1:3.01:39,3,0	1/1:0,1:1:3.01:42,3,0	1/1:0,2:2:3.01:42,3,0	1/1:0,2:2:5.93:52,6,0	1/1:0,2:2:6.02:80,6,0	1/1:0,8:8:11.83:116,12,0	1/1:0,2:2:3.01:42,3,0	1/1:0,1:1:3.01:41,3,0	1/1:0,4:4:9.03:125,9,0	1/1:0,2:2:3.01:42,3,0	1/1:1,3:4:9.03:122,9,0	1/1:0,6:6:11.97:143,12,0	./.
chr10	49453500	.	GC	G	11811.56	PASS	AB=1.000;AC=51;AF=0.911;AN=56;BaseQRankSum=9.665;DP=559;FS=0.000;HRun=8;HaplotypeScore=99.7784;InbreedingCoeff=0.7751;MQ=79.94;MQ0=0;MQRankSum=-1.709;QD=23.72;ReadPosRankSum=1.812;VQSLOD=4.9003;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,126,1489	1/1:1,7:8:21.03:203,21,0	0/0:14,0:14:1.24:0,1,178	0/1:14,0:14:1.47:1,0,192	1/1:1,14:15:36.05:348,36,0	1/1:1,22:23:63.10:608,63,0	1/1:3,14:17:36.05:348,36,0	1/1:4,30:34:81.06:762,81,0	1/1:1,15:16:36.06:348,36,0	1/1:1,18:19:54.08:521,54,0	1/1:0,17:17:45.07:434,45,0	1/1:3,15:18:45.07:434,45,0	1/1:3,25:28:72.11:695,72,0	1/1:2,18:20:54.08:521,54,0	1/1:1,25:26:72.12:695,72,0	1/1:4,23:27:63.10:608,63,0	1/1:2,28:30:81.13:782,81,0	1/1:2,16:18:45.07:435,45,0	1/1:6,11:17:38.98:365,39,0	1/1:2,14:16:36.05:348,36,0	1/1:2,18:20:51.08:492,51,0	1/1:1,16:17:48.08:463,48,0	1/1:0,13:13:33.05:319,33,0	1/1:2,17:19:48.08:464,48,0	1/1:1,12:13:33.05:319,33,0	1/1:3,17:20:51.07:488,51,0	1/1:0,23:23:54.09:521,54,0	1/1:0,10:10:30.05:290,30,0
chr10	49453865	.	TC	T	13593.78	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=8.765;DP=605;FS=1.530;HRun=6;HaplotypeScore=129.2966;InbreedingCoeff=0.9737;MQ=83.74;MQ0=0;MQRankSum=-6.317;QD=26.55;ReadPosRankSum=3.718;VQSLOD=3.4438;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,132,1632	1/1:0,7:7:18.05:193,18,0	0/0:26,0:25:43.87:0,44,647	0/0:18,0:18:38.23:0,38,431	1/1:2,8:11:20.97:209,21,0	1/1:1,18:19:57.14:612,57,0	1/1:3,23:26:57.14:613,57,0	1/1:5,20:25:54.12:574,54,0	1/1:0,24:24:72.18:774,72,0	1/1:3,12:15:33.08:354,33,0	1/1:2,16:18:39.05:398,39,0	1/1:1,19:20:54.13:580,54,0	1/1:3,23:26:66.14:700,66,0	1/1:1,27:28:81.20:870,81,0	1/1:2,22:24:63.16:677,63,0	1/1:2,27:29:69.17:741,69,0	1/1:1,36:37:96.24:1031,96,0	1/1:0,21:21:57.14:613,57,0	1/1:4,8:12:22.82:210,23,0	1/1:0,14:14:42.07:439,42,0	1/1:1,28:29:78.20:838,78,0	1/1:5,8:13:27.06:285,27,0	1/1:2,11:13:30.07:321,30,0	1/1:1,32:33:81.20:870,81,0	1/1:2,14:16:33.98:383,34,0	1/1:1,19:20:54.13:579,54,0	1/1:3,26:29:59.92:633,60,0	1/1:0,3:3:9.02:97,9,0
chr10	49454033	.	TTG	T	23516.41	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=6.370;DP=689;FS=0.450;HRun=0;HaplotypeScore=90.1488;InbreedingCoeff=0.9065;MQ=60.26;MQ0=16;MQRankSum=-0.348;QD=38.74;ReadPosRankSum=3.121;VQSLOD=7.0263;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,132,2318	1/1:0,10:9:21.07:321,21,0	0/0:15,0:12:26.96:0,27,513	0/0:22,0:20:55.78:0,56,921	1/1:0,25:25:69.15:1003,69,0	1/1:1,19:20:51.17:780,51,0	1/1:0,17:17:42.14:642,42,0	1/1:1,32:32:84.23:1208,84,0	1/1:0,25:25:66.12:1010,66,0	1/1:0,27:26:78.26:1174,78,0	1/1:2,32:34:93.23:1368,93,0	1/1:1,22:22:57.19:873,57,0	1/1:0,29:28:78.26:1192,78,0	1/1:5,23:27:78.26:1173,78,0	1/1:0,27:27:66.22:1010,66,0	1/1:0,18:17:51.17:780,51,0	1/1:3,30:31:93.28:1379,93,0	1/1:3,15:18:0.01:509,0,0	1/1:1,18:17:45.09:603,45,0	1/1:0,28:28:78.15:1117,78,0	1/1:0,24:23:63.21:964,63,0	1/1:1,19:19:57.10:819,57,0	1/1:0,26:25:63.20:962,63,0	1/1:0,26:26:60.20:918,60,0	1/1:0,17:15:36.12:551,36,0	1/1:1,40:40:99:1602,108,0	1/1:1,33:34:87.30:1330,87,0	1/1:0,5:5:15.05:230,15,0
chr10	49455691	.	T	TGT	1663.10	PASS	AB=1.000;AC=38;AF=0.792;AN=48;BaseQRankSum=-1.420;DP=507;FS=0.000;HRun=0;HaplotypeScore=85.6940;InbreedingCoeff=-0.1234;MQ=52.20;MQ0=18;MQRankSum=1.801;QD=3.83;ReadPosRankSum=0.844;VQSLOD=1.3815;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:36,0:34:7.13:7,0,178	1/1:7,0:6:3:26,3,0	./.	./.	1/1:18,0:18:2.63:26,3,0	0/1:20,0:20:20:20,0,26	1/1:19,0:18:2.99:26,3,0	1/1:24,0:24:7.82:26,8,0	1/1:18,0:18:3:26,3,0	1/1:19,5:25:18.03:206,18,0	1/1:17,0:16:8.96:68,9,0	0/1:17,0:16:13.01:158,0,13	0/1:19,0:19:16.89:163,0,17	1/1:8,0:8:3:26,3,0	1/1:12,0:11:3:26,3,0	0/0:16,0:16:16.99:0,17,84	0/1:31,0:31:11.38:144,0,11	1/1:28,0:28:3.37:218,3,0	0/1:13,0:13:0:0,0,0	1/1:15,0:14:3.01:43,3,0	./.	0/1:20,0:20:35.13:201,0,35	1/1:20,0:19:6.02:89,6,0	0/1:18,0:17:23.40:44,0,23	1/1:11,0:11:3.01:44,3,0	1/1:17,0:17:1.38:161,1,0	1/1:21,0:21:3.22:42,3,0	./.
chr10	49455891	.	TA	T	6505.01	PASS	AB=0.769;AC=50;AF=0.893;AN=56;BaseQRankSum=4.318;DP=444;FS=6.281;HRun=11;HaplotypeScore=54.9160;InbreedingCoeff=0.5718;MQ=73.33;MQ0=1;MQRankSum=0.029;QD=15.87;ReadPosRankSum=0.972;VQSLOD=5.5392;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:57.10:0,57,590	0/1:1,6:7:14.01:105,0,14	0/0:12,0:8:1.48:0,1,36	0/1:14,0:13:2.80:3,0,54	1/1:1,25:26:71.86:586,72,0	1/1:2,14:16:38.94:320,39,0	1/1:1,11:12:29.95:246,30,0	1/1:9,21:30:59.84:484,60,0	1/1:0,4:4:8.99:74,9,0	1/1:4,21:25:62.90:517,63,0	1/1:3,25:28:68.88:566,69,0	1/1:2,0:13:20.36:59,20,0	1/1:0,0:12:20.37:59,20,0	1/1:2,7:9:17.97:148,18,0	1/1:0,6:6:17.98:148,18,0	1/1:0,0:14:28.52:83,29,0	1/1:5,17:22:44.93:369,45,0	1/1:0,13:13:32.96:271,33,0	1/1:4,13:17:37.44:321,37,0	1/1:4,19:23:21.95:387,22,0	1/1:1,3:4:8.99:74,9,0	1/1:3,0:13:16.76:48,17,0	1/1:1,0:13:20.37:59,20,0	1/1:2,0:12:16.29:47,16,0	1/1:4,21:26:52.97:425,53,0	1/1:1,21:22:59.91:492,60,0	1/1:2,15:17:41.94:344,42,0	1/1:0,11:11:32.96:271,33,0
chr10	49457295	.	CCATATGGTATGA	C	3687.43	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.834;DP=714;FS=5.555;HRun=0;HaplotypeScore=266.9228;InbreedingCoeff=0.9974;MQ=81.45;MQ0=0;MQRankSum=-9.514;QD=94.55;ReadPosRankSum=1.847;VQSLOD=2.8692;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,129,7560	1/1:0,9:9:21.07:794,21,0	0/0:22,0:22:57.19:0,57,2192	0/0:17,0:18:41.63:0,42,1317	0/0:33,0:33:96.33:0,96,5484	0/0:17,0:17:51.16:0,51,2909	0/0:26,0:26:78.25:0,78,4542	0/0:27,0:27:78.27:0,78,4415	0/0:31,0:31:87.30:0,87,5281	0/0:31,0:31:90.31:0,90,5429	0/0:22,0:22:66.23:0,66,3870	0/0:31,0:31:93.32:0,93,5615	0/0:25,0:25:75.26:0,75,4473	0/0:33,0:33:99:0,99,5939	1/1:2,28:30:75.26:2894,75,0	0/0:17,0:17:48.16:0,48,2846	0/0:27,0:27:81.28:0,81,5011	0/0:16,0:16:48.16:0,48,3007	0/0:27,0:27:75.26:0,75,4397	0/0:21,0:21:63.20:0,63,3679	0/0:34,0:34:99:0,102,6216	0/0:34,0:34:99:0,99,5777	0/0:29,0:29:87.28:0,87,4960	0/0:32,0:32:96.32:0,96,5404	0/0:23,0:23:69.24:0,69,4305	0/0:21,0:21:63.22:0,63,3898	0/0:24,0:24:72.23:0,72,4213	0/0:9,0:9:27.09:0,27,1691
chr10	49457502	.	GTT	G	5708.74	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=17.073;DP=607;FS=6.331;HRun=4;HaplotypeScore=93.1423;InbreedingCoeff=0.9992;MQ=82.52;MQ0=1;MQRankSum=-7.942;QD=36.59;ReadPosRankSum=0.626;VQSLOD=4.0602;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,108,1953	1/1:2,5:7:21.07:297,21,0	0/0:21,0:21:63.20:0,63,1112	0/0:18,0:18:51.17:0,51,912	0/0:21,0:21:60.21:0,60,1124	0/0:14,0:14:42.14:0,42,777	0/0:20,0:20:60.17:0,60,1055	1/1:2,25:27:78:1062,78,0	0/0:13,0:13:39.13:0,39,701	0/0:30,0:30:87.30:0,87,1621	0/0:29,0:29:81.28:0,81,1513	0/0:20,0:20:57.20:0,57,1068	0/0:17,0:17:45.15:0,45,834	0/0:19,0:19:57.20:0,57,1050	1/1:1,26:26:69.23:1015,69,0	0/0:16,0:16:45.15:0,45,838	0/0:19,0:19:57.20:0,57,1068	0/0:26,0:26:78.27:0,78,1453	1/1:6,9:15:35.98:466,36,0	1/1:3,26:29:69.07:945,69,0	1/1:3,16:19:51.15:709,51,0	0/0:16,0:16:45.15:0,45,838	0/0:28,0:28:81.26:0,81,1478	0/0:20,0:20:60.21:0,60,1124	0/0:31,0:31:87.30:0,87,1601	0/0:18,0:18:54.18:0,54,971	1/1:3,29:31:84.26:1215,84,0	0/0:18,0:18:51.17:0,51,947
chr10	49457504	.	T	TAC	4565.56	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=15.865;DP=605;FS=5.557;HRun=0;HaplotypeScore=98.6389;InbreedingCoeff=0.9992;MQ=82.56;MQ0=1;MQRankSum=-6.017;QD=28.53;ReadPosRankSum=0.167;VQSLOD=6.0683;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,111,1748	1/1:5,2:7:21.06:287,21,0	0/0:22,0:22:63.12:0,63,971	0/0:18,0:18:46.01:0,46,769	0/0:21,0:21:60.20:0,60,979	0/0:14,0:14:42.14:0,42,683	0/0:20,0:20:60.17:0,60,927	1/1:30,1:30:86.70:752,87,0	0/0:13,0:13:39.12:0,39,614	0/0:30,0:30:87.30:0,87,1417	0/0:27,0:27:81.28:0,81,1318	0/0:20,0:20:60.20:0,60,957	0/0:15,0:15:45.15:0,45,733	0/0:19,0:19:57.19:0,57,926	1/1:29,0:28:68.73:657,69,0	0/0:15,0:15:45.15:0,45,734	0/0:19,0:19:57.19:0,57,929	0/0:26,0:26:78.27:0,78,1272	1/1:10,4:14:36.26:481,36,0	1/1:28,1:29:68.95:842,69,0	1/1:16,2:18:51.10:674,51,0	0/0:15,0:15:45.15:0,45,734	0/0:28,0:28:81.26:0,81,1297	0/0:20,0:20:60.20:0,60,978	0/0:29,0:29:87.30:0,87,1417	0/0:18,0:18:54.18:0,54,854	1/1:30,2:31:83.91:872,84,0	0/0:18,0:18:51.17:0,51,832
chr10	49458209	.	C	CA	6137.37	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=-8.812;DP=623;FS=9.401;HRun=5;HaplotypeScore=64.8652;InbreedingCoeff=0.9067;MQ=70.60;MQ0=1;MQRankSum=-1.080;QD=30.09;ReadPosRankSum=-0.458;VQSLOD=4.7786;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:57.11:0,57,603	1/1:10,0:10:26.87:202,27,0	0/0:6,0:7:16.85:0,17,165	0/1:12,0:12:24.47:24,0,160	0/0:38,0:38:99:0,108,1144	0/0:23,0:23:66.15:0,66,700	0/0:9,0:9:24.04:0,24,249	1/1:2,39:41:99:1525,117,0	0/0:20,0:20:57.14:0,57,612	0/0:31,0:31:81.20:0,81,865	0/0:26,0:26:66.16:0,66,709	0/0:19,0:19:42.10:0,42,451	0/0:16,0:16:48.12:0,48,516	0/0:13,0:13:36.09:0,36,387	1/1:25,0:24:68.72:530,69,0	0/0:34,0:34:96.23:0,96,1023	0/0:27,0:27:81.18:0,81,861	0/0:16,0:16:39.10:0,39,419	1/1:4,15:19:45.14:578,45,0	1/1:1,43:44:99:1559,120,0	1/1:2,20:22:54.18:711,54,0	0/0:17,0:17:48.12:0,48,516	0/0:18,0:18:54.14:0,54,578	0/0:24,0:24:63.03:0,63,667	0/0:26,0:26:66.15:0,66,702	0/0:22,0:22:63.16:0,63,677	1/1:2,29:31:78.22:1008,78,0	0/0:9,0:9:27.07:0,27,290
chr10	49458214	.	A	AG	2963.89	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=10.335;DP=609;FS=7.053;HRun=0;HaplotypeScore=74.5654;InbreedingCoeff=0.8998;MQ=68.05;MQ0=1;MQRankSum=-2.051;QD=15.20;ReadPosRankSum=1.521;VQSLOD=5.4432;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:63.14:0,63,821	1/1:0,9:9:27.09:422,27,0	0/0:6,0:6:15.94:0,16,211	0/1:9,0:9:20.71:21,0,202	0/0:37,0:37:99:0,111,1511	0/0:23,0:23:66.22:0,66,915	0/0:10,0:10:30.03:0,30,362	1/1:42,0:42:32.05:422,32,0	0/0:22,0:22:63.17:0,63,841	0/0:29,0:29:87.28:0,87,1187	0/0:22,0:22:66.22:0,66,919	0/0:16,0:16:45.14:0,45,609	0/0:19,0:19:54.11:0,54,714	0/0:13,0:13:39.11:0,39,519	1/1:1,25:25:69.23:1078,69,0	0/0:35,0:35:99:0,99,1346	0/0:28,0:28:84.24:0,84,1147	0/0:14,0:14:42.11:0,42,565	1/1:15,0:15:14.23:170,14,0	1/1:43,0:43:87.76:517,88,0	1/1:21,0:21:14.22:223,14,0	0/0:19,0:19:51.16:0,51,695	0/0:20,0:20:60.17:0,60,802	0/0:24,0:24:63.21:0,63,876	0/0:25,0:25:72.22:0,72,969	0/0:22,0:22:66.21:0,66,907	1/1:30,0:30:25.87:310,26,0	0/0:9,0:9:27.09:0,27,372
chr10	49459114	.	GA	G	4875.35	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=17.147;DP=706;FS=0.340;HRun=5;HaplotypeScore=86.6064;InbreedingCoeff=0.9992;MQ=84.31;MQ0=0;MQRankSum=-2.832;QD=30.66;ReadPosRankSum=-1.359;VQSLOD=4.6147;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,135,1828	1/1:0,7:7:21.06:238,21,0	0/0:26,0:26:60.14:0,60,784	0/0:18,0:17:37.34:0,37,476	0/0:31,0:31:90.26:0,90,1197	0/0:23,0:23:66.22:0,66,903	0/0:23,0:23:63.21:0,63,861	1/1:3,27:30:81.20:905,81,0	0/0:28,0:28:75.25:0,75,1026	0/0:23,0:23:66.22:0,66,900	0/0:21,0:21:54.17:0,54,719	0/0:15,0:15:42.14:0,42,572	0/0:27,0:27:75.25:0,75,1026	0/0:28,0:28:72.21:0,72,946	1/1:2,31:33:87.25:987,87,0	0/0:29,0:29:84.28:0,84,1146	0/0:32,0:32:96.26:0,96,1273	0/0:23,0:23:60.17:0,60,799	1/1:2,19:21:57.15:638,57,0	1/1:0,17:17:51.15:577,51,0	1/1:3,22:25:63.18:715,63,0	0/0:33,0:33:96.31:0,96,1297	0/0:24,0:24:60.20:0,60,820	0/0:30,0:30:90.30:0,90,1231	0/0:21,0:21:63.21:0,63,859	0/0:24,0:24:60.18:0,60,792	1/1:1,25:26:72.20:816,72,0	0/0:20,0:20:57.19:0,57,780
chr10	49460026	.	A	AAC	862.78	PASS	AB=0.953;AC=25;AF=0.500;AN=50;BaseQRankSum=2.240;DP=539;FS=0.861;HRun=0;HaplotypeScore=89.1096;InbreedingCoeff=0.4093;MQ=60.02;MQ0=19;MQRankSum=-0.323;QD=2.98;ReadPosRankSum=-1.396;VQSLOD=2.0794;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:25:15.94:16,0,55	./.	./.	./.	1/1:13,0:13:2.99:24,3,0	0/0:11,5:15:0:0,0,0	1/1:26,0:25:20.87:157,21,0	0/1:24,0:24:0:0,0,0	1/1:14,0:14:10.85:94,11,0	1/1:13,0:13:10.18:71,10,0	1/1:13,0:13:5.95:43,6,0	0/0:16,0:16:8.99:0,9,84	0/0:12,0:12:9.98:0,10,89	1/1:18,0:17:12.21:91,12,0	0/0:11,0:14:5.68:0,6,28	0/0:23,0:29:11.36:0,11,56	0/1:25,10:36:99:108,0,135	1/1:18,0:18:12.49:144,12,0	0/0:16,0:16:2.35:0,2,26	0/0:13,0:13:6:0,6,56	0/1:36,0:33:16.60:17,0,117	0/0:16,0:17:12:0,12,116	0/1:11,0:11:16.92:17,0,55	0/0:29,0:27:18.04:0,18,191	1/1:14,0:14:7.55:54,8,0	1/1:24,0:24:25.80:173,26,0	0/0:8,0:8:2.96:0,3,32	1/1:3,0:3:2.96:19,3,0
chr10	49460536	.	C	CTCTT	5711.79	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-1.535;DP=502;FS=0.000;HRun=0;HaplotypeScore=117.7487;InbreedingCoeff=0.9736;MQ=63.10;MQ0=9;MQRankSum=-5.852;QD=52.89;ReadPosRankSum=-5.987;VQSLOD=3.5685;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:34.36:0,34,692	1/1:0,8:8:18.06:444,18,0	0/0:27,0:11:30.10:0,30,614	0/0:42,0:23:59.36:0,59,1125	0/0:15,0:15:36.07:0,36,753	0/0:20,0:20:31.23:0,31,608	0/0:19,0:20:38.30:0,38,802	1/1:4,13:17:36.67:1103,37,0	0/0:21,0:21:44.42:0,44,762	0/0:18,0:18:31.66:0,32,631	0/0:24,0:24:54.66:0,55,1129	0/0:11,0:12:36.12:0,36,750	0/0:11,0:13:30.10:0,30,607	0/0:16,0:16:30.10:0,30,626	1/1:7,7:15:45.12:893,45,0	0/0:14,0:14:31.29:0,31,609	0/0:17,0:17:36.12:0,36,754	0/0:18,0:18:37.37:0,37,751	1/1:7,10:17:43.87:1180,44,0	1/1:3,16:20:48.16:1097,48,0	1/1:1,4:7:6.48:69,6,0	0/0:19,0:22:54.18:0,54,1065	0/0:10,0:13:26.96:0,27,564	0/0:11,0:15:21.04:0,21,420	0/0:20,0:20:48.16:0,48,995	0/0:20,0:18:41.63:0,42,771	1/1:3,19:23:45.50:926,45,0	0/0:6,0:6:11.98:0,12,234
chr10	49460963	.	ATT	A	3435.13	PASS	AB=0.524;AC=15;AF=0.268;AN=56;BaseQRankSum=-4.261;DP=516;FS=13.235;HRun=12;HaplotypeScore=104.8901;InbreedingCoeff=0.8531;MQ=69.26;MQ0=2;MQRankSum=0.525;QD=21.47;ReadPosRankSum=-1.396;VQSLOD=1.2511;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:93.25:0,93,1275	1/1:3,5:8:12.02:122,12,0	0/0:15,0:14:0.79:0,1,96	0/0:10,0:6:14.32:0,14,115	0/0:23,0:23:59.74:0,60,473	0/0:2,0:15:27.95:0,28,113	0/0:2,0:5:4.99:0,5,18	1/1:5,28:33:81.12:815,81,0	0/0:2,0:18:37.94:0,38,168	0/0:19,0:19:50.81:0,51,397	0/0:20,0:20:44.46:0,44,345	0/0:6,0:6:18.06:0,18,268	0/0:20,0:20:56:0,56,797	0/0:22,0:22:50.81:0,51,395	1/1:0,7:8:23.79:225,24,0	0/1:1,1:11:5.05:5,0,54	0/0:19,0:19:50.81:0,51,396	0/0:25,0:25:59.15:0,59,450	1/1:11,16:27:38.82:440,39,0	1/1:2,40:42:99:1218,120,0	1/1:2,5:7:12.02:122,12,0	0/0:8,0:9:23.53:0,24,297	0/0:19,0:20:50.65:0,51,698	0/0:12,0:12:21.06:0,21,293	0/0:20,0:20:50.81:0,51,397	0/0:21,0:21:56.79:0,57,442	1/1:7,17:24:48.05:487,48,0	0/0:21,0:21:44.83:0,45,349
chr10	49460969	.	T	TA	6232.31	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=-5.148;DP=509;FS=2.521;HRun=0;HaplotypeScore=84.7273;InbreedingCoeff=0.9169;MQ=68.56;MQ0=2;MQRankSum=-1.303;QD=32.29;ReadPosRankSum=3.966;VQSLOD=4.7029;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:99:0,99,1249	0/0:5,0:5:11.82:0,12,77	0/0:17,0:13:35.44:0,35,308	0/1:11,0:6:6.69:7,0,33	1/1:0,22:22:59.96:717,60,0	0/0:16,0:16:32.83:0,33,243	0/0:4,0:4:8.97:0,9,69	0/0:35,0:35:99:0,101,711	0/0:18,0:18:47.77:0,48,370	1/1:0,20:20:60.15:748,60,0	1/1:0,17:17:47.99:588,48,0	0/0:7,0:7:21.06:0,21,278	0/0:23,0:23:66.12:0,66,816	1/1:0,20:21:51.17:677,51,0	0/0:9,0:9:26.64:0,27,179	0/0:12,0:12:35.81:0,36,267	1/1:0,18:18:51.17:676,51,0	1/1:1,24:25:60.20:793,60,0	0/0:24,0:24:71.21:0,71,523	0/0:44,0:44:99:0,129,838	0/0:6,0:6:14.82:0,15,100	0/0:9,0:9:27.01:0,27,306	0/0:22,0:22:66.15:0,66,822	0/0:9,0:9:27.06:0,27,325	1/1:0,17:18:50.90:649,51,0	1/1:0,21:21:60.16:780,60,0	0/0:23,0:23:62.26:0,62,429	1/1:0,20:20:45.15:597,45,0
chr10	49462139	.	TGA	T	1135.74	PASS	AB=0.966;AC=26;AF=0.500;AN=52;BaseQRankSum=-0.650;DP=634;FS=7.735;HRun=0;HaplotypeScore=103.9390;InbreedingCoeff=0.2805;MQ=55.60;MQ0=9;MQRankSum=1.880;QD=3.00;ReadPosRankSum=-0.225;VQSLOD=1.2139;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:25:21.02:0,21,219	0/0:9,0:9:3.01:0,3,45	./.	./.	0/1:21,1:22:32.89:49,0,33	0/0:22,0:23:29.96:0,30,307	0/1:23,1:26:34.74:35,0,282	0/0:32,0:32:18.06:0,18,227	0/1:26,0:27:9.21:9,0,439	1/1:22,0:23:11.86:112,12,0	1/1:29,2:31:17.98:184,18,0	0/0:16,0:16:9.80:0,10,243	0/1:17,3:20:11.49:11,0,189	1/1:22,1:24:12:114,12,0	1/1:11,12:26:23.73:223,24,0	0/1:8,0:17:6.34:6,0,147	1/1:8,10:20:20.72:191,21,0	1/1:9,4:14:14.87:144,15,0	1/1:21,0:19:3:32,3,0	0/0:26,0:28:6.01:0,6,71	0/0:14,0:21:11.99:0,12,104	0/0:14,4:17:9.03:0,9,133	0/1:20,0:19:8.90:9,0,54	0/1:15,0:16:54.46:54,0,209	1/1:20,1:28:8.69:60,9,0	0/1:24,0:24:24.70:51,0,25	0/0:13,0:26:17.99:0,18,171	1/1:17,0:17:2.57:30,3,0
chr10	49464424	.	T	TGTGGA	6003.27	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=15.830;DP=737;FS=0.786;HRun=0;HaplotypeScore=179.4895;InbreedingCoeff=0.9997;MQ=82.29;MQ0=0;MQRankSum=-15.897;QD=43.82;ReadPosRankSum=0.436;VQSLOD=5.0198;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:72.25:0,72,1563	0/0:9,0:9:27.09:0,27,586	0/0:22,0:22:57.16:0,57,1134	0/0:27,0:28:72.16:0,72,1472	0/0:28,0:28:81.24:0,81,1633	0/0:26,0:26:75.24:0,75,1554	0/0:29,0:29:84.27:0,84,1764	0/0:34,0:34:99:0,99,2000	0/0:18,0:18:54.19:0,54,1160	0/0:34,0:34:99:0,99,2112	0/0:21,0:21:63.22:0,63,1365	1/1:20,1:26:63.19:1207,63,0	1/1:25,0:32:63.34:1521,63,0	0/0:32,0:32:90.31:0,90,1913	0/0:39,0:39:99:0,114,2459	0/0:33,0:33:96.33:0,96,2061	0/0:24,0:24:60.17:0,60,1211	0/0:11,0:11:33.11:0,33,714	0/0:29,0:29:81.27:0,81,1636	0/0:30,0:30:87.30:0,87,1889	0/0:25,0:25:75.26:0,75,1627	1/1:24,0:28:72.25:1390,72,0	1/1:24,0:30:52.08:1196,52,0	1/1:19,0:21:43.21:688,43,0	0/0:30,0:30:87.29:0,87,1824	0/0:30,0:30:87.30:0,87,1882	0/0:25,0:25:72.25:0,72,1547	0/0:17,0:17:51.16:0,51,1062
chr10	49464426	.	T	TGGACA	6905.64	PASS	AB=0.634;AC=9;AF=0.161;AN=56;BaseQRankSum=15.178;DP=726;FS=0.392;HRun=0;HaplotypeScore=170.2433;InbreedingCoeff=0.8641;MQ=82.90;MQ0=0;MQRankSum=-15.412;QD=57.07;ReadPosRankSum=1.481;VQSLOD=5.3249;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:72.25:0,72,1678	0/0:9,0:9:27.09:0,27,629	0/0:22,0:22:63.22:0,63,1352	0/0:28,0:28:78.10:0,78,1637	0/0:31,0:31:84.27:0,84,1883	0/0:27,0:27:75.26:0,75,1721	0/0:29,0:29:87.28:0,87,1935	0/0:36,0:36:99:0,102,2229	0/0:18,0:18:54.19:0,54,1241	0/0:35,0:35:99:0,105,2334	0/0:21,0:21:63.22:0,63,1462	1/1:5,18:23:57.20:1456,57,0	1/1:9,20:29:48.93:1821,49,0	0/0:33,0:33:96.78:0,97,2110	0/0:40,0:40:99:0,117,2661	0/0:33,0:33:96.33:0,96,2205	0/0:22,0:22:63.20:0,63,1381	0/0:11,0:11:33.11:0,33,766	0/0:26,0:26:78.26:0,78,1719	0/0:30,0:30:90.31:0,90,2078	0/0:28,0:28:81.25:0,81,1794	1/1:4,21:25:16.44:1622,16,0	0/1:11,15:26:67.56:1260,0,68	1/1:5,12:18:38.15:747,38,0	0/0:30,0:30:87.29:0,87,1948	0/0:30,0:30:87.30:0,87,2018	0/0:24,0:24:72.25:0,72,1654	0/0:17,0:17:51.16:0,51,1132
chr10	49464429	.	G	GTTGT	6074.55	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=14.415;DP=721;FS=2.714;HRun=0;HaplotypeScore=156.6792;InbreedingCoeff=0.9996;MQ=85.02;MQ0=0;MQRankSum=-14.976;QD=48.60;ReadPosRankSum=0.175;VQSLOD=5.1310;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:75.24:0,75,1529	0/0:9,0:9:27.09:0,27,566	0/0:24,0:24:63.22:0,63,1228	0/0:30,0:30:82.51:0,83,1553	0/0:34,0:34:96.32:0,96,1902	0/0:27,0:27:78.27:0,78,1598	0/0:28,0:28:84.29:0,84,1736	0/0:33,0:33:93.31:0,93,1874	0/0:17,0:17:51.18:0,51,1069	0/0:34,0:34:96.31:0,96,1948	0/0:22,0:22:63.22:0,63,1305	1/1:6,18:24:60.20:1217,60,0	1/1:8,20:28:84.23:1518,84,0	0/0:31,0:31:45.99:0,46,1690	0/0:39,0:39:99:0,117,2421	0/0:32,0:32:93.32:0,93,1937	0/0:20,0:20:60.21:0,60,1203	0/0:11,0:11:33.11:0,33,692	0/0:23,0:23:64.40:0,64,1291	0/0:31,0:31:90.31:0,90,1864	0/0:28,0:28:84.29:0,84,1718	1/1:6,21:27:72.41:1430,72,0	1/1:12,15:28:75.43:1329,75,0	1/1:6,12:18:33.68:581,34,0	0/0:27,0:27:78.27:0,78,1624	0/0:30,0:30:87.29:0,87,1786	0/0:23,0:23:69.24:0,69,1447	0/0:17,0:17:51.13:0,51,1026
chr10	49465745	.	CAGCAGGTAAGTG	C	9315.39	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=14.423;DP=679;FS=1.371;HRun=0;HaplotypeScore=236.0917;InbreedingCoeff=0.9970;MQ=88.48;MQ0=0;MQRankSum=-12.880;QD=70.04;ReadPosRankSum=-0.485;VQSLOD=4.3181;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,141,7889	1/1:0,7:7:18.06:637,18,0	0/0:26,0:26:72.14:0,72,3757	0/0:28,0:28:78.23:0,78,4101	0/0:21,0:21:60.21:0,60,3094	0/0:17,0:17:48.16:0,48,2699	0/0:28,0:28:84.29:0,84,5004	1/1:9,16:25:48.15:1610,48,0	0/0:20,0:20:54.17:0,54,3040	0/0:30,0:30:72.25:0,72,4220	0/0:14,0:14:42.13:0,42,2337	0/0:25,0:25:69.24:0,69,3660	0/0:28,0:28:84.29:0,84,4841	0/0:26,0:26:75.26:0,75,4361	1/1:3,28:31:69.24:2573,69,0	0/0:30,0:30:87.30:0,87,5016	0/0:42,0:42:99:0,120,7330	0/0:19,0:19:57.20:0,57,3327	1/1:3,12:15:36.07:1024,36,0	1/1:4,7:11:18.06:543,18,0	1/1:7,14:21:36.12:1162,36,0	0/0:28,0:28:69.24:0,69,3617	0/0:26,0:26:72.25:0,72,4329	0/0:28,0:28:84.29:0,84,4980	0/0:18,0:18:48.15:0,48,2697	0/0:31,0:31:87.27:0,87,4812	1/1:4,19:23:48.16:1765,48,0	0/0:12,0:12:33.11:0,33,2015
chr10	49466255	.	AT	A	12210.83	PASS	AB=0.909;AC=51;AF=0.911;AN=56;BaseQRankSum=2.192;DP=661;FS=6.324;HRun=10;HaplotypeScore=68.1414;InbreedingCoeff=0.7724;MQ=67.18;MQ0=1;MQRankSum=0.137;QD=20.12;ReadPosRankSum=2.189;VQSLOD=5.9801;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:75.16:0,75,816	1/1:0,9:9:24:208,24,0	0/0:20,0:13:15.43:0,15,190	0/1:8,1:9:34.31:34,0,85	1/1:3,30:33:80.71:689,81,0	1/1:1,23:24:62.98:547,63,0	1/1:2,18:20:47.98:417,48,0	1/1:6,26:32:71.96:625,72,0	1/1:4,17:21:44.99:391,45,0	1/1:7,28:35:83.97:729,84,0	1/1:2,17:19:44.97:388,45,0	1/1:2,15:17:38.98:339,39,0	1/1:2,23:25:62.98:547,63,0	1/1:2,16:18:47.99:417,48,0	1/1:3,24:27:65.98:573,66,0	1/1:2,21:23:53.99:468,54,0	1/1:4,25:29:62.98:547,63,0	1/1:1,15:16:38.99:339,39,0	1/1:6,15:21:44.96:391,45,0	1/1:4,18:22:50.97:443,51,0	1/1:4,16:20:47.98:417,48,0	1/1:3,20:23:53.97:469,54,0	1/1:6,17:23:44.99:391,45,0	1/1:2,27:29:68.98:599,69,0	1/1:4,22:26:50.97:443,51,0	1/1:4,18:22:53.97:469,54,0	1/1:6,30:37:86.01:735,86,0	1/1:1,25:26:68.99:599,69,0
chr10	49466518	.	AGTG	A	6599.52	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=14.977;DP=643;FS=4.154;HRun=0;HaplotypeScore=145.8124;InbreedingCoeff=0.9997;MQ=88.35;MQ0=0;MQRankSum=-7.890;QD=40.74;ReadPosRankSum=0.350;VQSLOD=6.1235;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:96.33:0,96,2333	1/1:4,10:14:33.09:513,33,0	0/0:17,0:17:50.74:0,51,1006	0/0:31,0:31:86.43:0,86,2005	0/0:33,0:33:99:0,99,1562	0/0:22,0:22:60.12:0,60,937	0/0:18,0:18:51.17:0,51,796	1/1:6,10:16:30.10:489,30,0	0/0:24,0:24:69.24:0,69,1109	0/0:26,0:26:69.10:0,69,1008	0/0:21,0:21:57.14:0,57,931	0/0:23,0:23:63.19:0,63,964	0/0:21,0:21:63.21:0,63,1003	0/0:15,0:15:45.15:0,45,719	1/1:3,35:38:93.31:1474,93,0	0/0:24,0:24:69.19:0,69,1101	0/0:31,0:31:93.32:0,93,1490	0/0:10,0:10:27.98:0,28,438	1/1:0,19:19:57.19:920,57,0	1/1:0,17:17:45.15:705,45,0	1/1:0,29:29:81.27:1293,81,0	0/0:20,0:20:60.20:0,60,968	0/0:29,0:29:84.29:0,84,1357	0/0:22,0:22:63.19:0,63,1011	0/0:16,0:16:42.06:0,42,662	0/0:25,0:25:69.15:0,69,1055	1/1:2,27:29:78.26:1204,78,0	0/0:21,0:21:63.21:0,63,1019
chr10	49466970	.	AACG	A	5764.24	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=15.205;DP=677;FS=2.582;HRun=0;HaplotypeScore=115.0688;InbreedingCoeff=0.9986;MQ=76.83;MQ0=1;MQRankSum=-7.308;QD=36.95;ReadPosRankSum=-2.059;VQSLOD=4.9319;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,102,2145	1/1:0,12:12:36.08:540,36,0	0/0:26,0:25:19.02:0,19,931	0/0:23,0:20:41.11:0,41,916	0/0:31,0:31:84.11:0,84,1745	0/0:25,0:25:75.18:0,75,1475	0/0:18,0:18:51.17:0,51,1080	1/1:1,22:23:66.12:892,66,0	0/0:25,0:25:69.24:0,69,1488	0/0:37,0:37:99:0,99,2044	0/0:25,0:25:63.19:0,63,1285	0/0:16,0:16:45.14:0,45,935	0/0:25,0:25:66.20:0,66,1330	0/0:23,0:23:57.18:0,57,1208	1/1:2,31:33:78.27:1242,78,0	0/0:17,0:17:45.15:0,45,678	0/0:30,0:30:84.29:0,84,1763	0/0:11,0:11:33.11:0,33,704	1/1:1,17:18:48.14:698,48,0	1/1:3,21:24:63.11:921,63,0	1/1:4,14:18:30.10:471,30,0	0/0:28,0:28:72.24:0,72,1545	0/0:35,0:35:99:0,99,2085	0/0:25,0:25:69.18:0,69,1416	0/0:21,0:21:54.19:0,54,1176	0/0:31,0:31:93.22:0,93,1944	1/1:4,24:28:63.21:999,63,0	0/0:15,0:15:45.02:0,45,891
chr10	49467262	.	A	AT	4206.46	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-12.778;DP=580;FS=1.636;HRun=9;HaplotypeScore=56.8118;InbreedingCoeff=0.9910;MQ=71.62;MQ0=1;MQRankSum=-0.542;QD=25.34;ReadPosRankSum=-1.361;VQSLOD=3.9142;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:86.97:0,87,755	1/1:1,8:9:24.06:265,24,0	0/0:17,0:15:10.46:0,10,231	0/0:14,0:14:29.99:0,30,260	0/0:22,0:23:65.02:0,65,553	0/0:31,1:32:59.80:0,60,748	0/0:23,0:23:59.57:0,60,520	1/1:8,25:33:75.16:809,75,0	0/0:19,0:19:44.98:0,45,390	0/0:25,0:25:71.98:0,72,625	0/0:15,0:15:32.98:0,33,287	0/0:19,0:19:50.97:0,51,443	0/0:16,0:16:47.99:0,48,417	0/0:18,0:18:53.99:0,54,469	1/1:4,28:32:52.11:788,52,0	0/0:17,0:17:50.97:0,51,439	0/0:27,0:27:71.98:0,72,625	0/0:13,0:13:32.99:0,33,286	1/1:4,18:22:31.10:571,31,0	1/1:6,25:31:49.12:744,49,0	1/1:2,13:15:36.10:398,36,0	0/0:19,0:19:50.97:0,51,440	0/0:23,0:23:62.97:0,63,547	0/0:12,0:12:26.99:0,27,234	0/0:14,0:15:28.96:0,29,233	0/0:26,0:26:65.96:0,66,567	1/1:5,19:24:57.15:629,57,0	0/0:11,0:11:26.99:0,27,234
chr10	49468570	.	TAAGTGGGC	T	4792.54	PASS	AC=14;AF=0.269;AN=52;BaseQRankSum=10.585;DP=445;FS=1.904;HRun=0;HaplotypeScore=75.8417;InbreedingCoeff=0.9039;MQ=41.99;MQ0=24;MQRankSum=-9.449;QD=40.61;ReadPosRankSum=3.988;VQSLOD=4.5848;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:26:39.13:0,39,1500	1/1:1,7:8:18.06:516,18,0	./.	./.	0/0:16,0:13:21.07:0,21,920	0/0:17,0:16:30.10:0,30,1336	0/0:19,0:17:27.09:0,27,1202	1/1:8,18:7:11.91:146,12,0	0/0:23,0:23:18.06:0,18,767	0/0:16,0:11:30.10:0,30,1287	0/0:4,0:4:3.01:0,3,134	0/0:13,0:10:15.05:0,15,671	0/0:12,0:10:15.05:0,15,589	0/0:21,0:21:44.88:0,45,1932	1/1:4,18:21:42.14:1205,42,0	0/0:13,0:13:24.08:0,24,1069	0/0:23,0:20:21.07:0,21,877	0/0:22,0:19:21.07:0,21,930	1/1:6,8:7:18.06:516,18,0	1/1:4,20:23:54.19:1549,54,0	1/1:2,5:6:3.01:86,3,0	0/0:10,0:8:15.05:0,15,593	0/0:9,0:9:12.04:0,12,515	0/0:21,0:20:27.09:0,27,1208	0/0:10,0:10:15.05:0,15,669	0/0:23,0:23:69.22:0,69,2965	1/1:1,16:11:27.09:775,27,0	0/0:20,0:20:30.10:0,30,1342
chr10	49468756	.	T	TTTTA	1798.50	PASS	AB=0.680;AC=13;AF=0.542;AN=24;BaseQRankSum=-0.654;DP=201;FS=8.011;HRun=0;HaplotypeScore=43.3575;InbreedingCoeff=0.5737;MQ=50.13;MQ0=2;MQRankSum=-0.766;QD=17.46;ReadPosRankSum=3.355;VQSLOD=1.3849;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:9:9.03:0,9,139	./.	./.	./.	1/1:10,1:11:12.04:278,12,0	0/0:7,0:7:14.92:0,15,232	./.	./.	0/0:3,0:3:3.01:0,3,46	./.	./.	0/0:3,0:5:3:0,3,28	./.	1/1:8,0:8:4.99:25,5,0	./.	./.	1/1:16,13:29:24.08:561,24,0	0/1:9,7:16:4.32:332,0,4	./.	./.	./.	./.	./.	0/0:1,0:3:3:0,3,28	1/1:8,4:12:9.03:210,9,0	1/1:2,6:8:18.06:365,18,0	./.	1/1:13,4:18:6.02:140,6,0
chr10	49475808	.	T	TA	1063.17	PASS	AB=0.789;AC=22;AF=0.524;AN=42;BaseQRankSum=-2.726;DP=195;FS=1.467;HRun=15;HaplotypeScore=35.8572;InbreedingCoeff=0.2055;MQ=58.75;MQ0=24;MQRankSum=-0.348;QD=6.99;ReadPosRankSum=1.094;VQSLOD=1.9093;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:13,8:22:3.28:124,3,0	./.	0/0:5,0:3:6.87:0,7,30	0/0:4,0:4:1.10:0,1,3	0/1:7,2:9:24.04:39,0,24	0/0:6,0:8:6.05:0,6,17	0/0:2,0:4:6.08:0,6,18	./.	0/0:5,0:5:3.99:0,4,12	0/1:12,2:15:22.74:59,0,23	1/1:9,4:12:20.51:143,21,0	0/1:3,3:6:14.91:61,0,15	1/1:2,2:4:7.55:54,8,0	1/1:6,7:12:17.98:151,18,0	./.	0/0:5,0:5:13.59:0,14,77	1/1:7,8:14:24.25:185,24,0	1/1:4,7:10:3.03:133,3,0	./.	./.	./.	0/0:2,0:2:1.23:0,1,3	0/1:10,1:8:13.52:14,0,42	0/1:4,0:5:8.86:9,0,11	0/1:4,4:7:9.02:42,0,9	1/1:7,2:6:6.31:41,6,0	./.	1/1:1,6:7:17.98:151,18,0
chr10	49476840	.	GGTGTGT	G	1463.65	PASS	AB=0.770;AC=34;AF=0.773;AN=44;BaseQRankSum=3.555;DP=525;FS=0.000;HRun=0;HaplotypeScore=125.1760;InbreedingCoeff=0.2589;MQ=56.15;MQ0=25;MQRankSum=-5.784;QD=4.65;ReadPosRankSum=2.522;VQSLOD=1.6020;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:51.73:0,52,1182	1/1:0,0:2:3.01:42,3,0	./.	./.	0/0:13,0:16:0:0,0,0	1/1:17,8:26:17.93:240,18,0	1/1:19,5:24:5.86:40,6,0	./.	1/1:7,4:12:3.01:60,3,0	1/1:8,0:13:10.75:133,11,0	0/1:11,0:15:0:1,0,0	1/1:18,3:21:8.99:141,9,0	1/1:6,2:8:5.98:80,6,0	1/1:12,0:17:6.02:84,6,0	./.	1/1:5,0:9:9.03:126,9,0	1/1:25,0:32:9.03:126,9,0	0/1:7,0:10:22.20:75,0,22	./.	1/1:5,0:8:3.01:42,3,0	0/0:27,0:34:3.48:0,3,79	1/1:12,1:13:6:56,6,0	1/1:9,2:11:2.97:20,3,0	1/1:22,14:37:9.42:182,9,0	0/1:6,0:13:0:0,0,0	0/1:23,0:27:51.12:94,0,51	1/1:11,0:13:2.51:41,3,0	./.
chr10	49476934	.	T	TA	5947.76	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=5.977;DP=564;FS=8.968;HRun=0;HaplotypeScore=87.2222;InbreedingCoeff=0.9984;MQ=93.21;MQ0=0;MQRankSum=-6.244;QD=42.48;ReadPosRankSum=-0.361;VQSLOD=4.6582;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,120,1658	1/1:0,13:13:39.13:622,39,0	0/0:30,0:30:84.15:0,84,1084	0/0:22,0:23:53.38:0,53,834	0/0:17,0:17:51.12:0,51,690	0/0:19,0:19:51.17:0,51,713	0/0:28,0:28:81.27:0,81,1132	1/1:1,22:23:66.22:1052,66,0	0/0:17,0:17:45.13:0,45,611	0/0:30,0:30:87.29:0,87,1217	0/0:16,0:16:45.15:0,45,628	0/0:18,0:18:54.18:0,54,753	0/0:16,0:16:48.16:0,48,671	0/0:19,0:19:57.17:0,57,777	1/1:1,26:27:72.25:1149,72,0	0/0:13,0:13:36.10:0,36,485	0/0:26,0:26:65.96:0,66,922	0/0:14,0:12:42.14:0,42,587	1/1:1,13:14:39.13:623,39,0	1/1:0,24:24:60.20:956,60,0	1/1:0,26:26:60.14:926,60,0	0/0:17,0:17:51.16:0,51,690	0/0:12,0:12:36.12:0,36,503	0/0:22,0:22:48:0,48,671	0/0:15,0:15:39.13:0,39,544	0/0:23,0:23:69.22:0,69,950	1/1:0,13:13:39.13:621,39,0	0/0:6,0:6:18.06:0,18,251
chr10	49477381	.	ATC	A	6263.98	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=17.790;DP=627;FS=7.416;HRun=0;HaplotypeScore=127.2071;InbreedingCoeff=0.9984;MQ=83.24;MQ0=0;MQRankSum=-16.688;QD=40.68;ReadPosRankSum=0.360;VQSLOD=6.0782;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,111,2053	1/1:0,15:15:45.15:686,45,0	0/0:26,0:26:68.37:0,68,1304	0/0:21,0:21:63.16:0,63,1099	0/0:34,0:34:99:0,102,1891	0/0:17,0:17:48.16:0,48,926	0/0:17,0:17:51.16:0,51,942	1/1:2,25:27:75.25:1145,75,0	0/0:23,0:23:69.22:0,69,1289	0/0:27,0:27:75.26:0,75,1446	0/0:25,0:25:72.25:0,72,1378	0/0:22,0:22:66.23:0,66,1266	0/0:21,0:21:63.18:0,63,1178	0/0:19,0:19:57.20:0,57,1100	1/1:2,31:33:93.14:1352,93,0	0/0:22,0:21:66.23:0,66,1266	0/0:17,0:17:51.17:0,51,974	0/0:12,0:11:36.12:0,36,694	1/1:1,15:16:42.13:621,42,0	1/1:1,24:25:66.03:931,66,0	1/1:0,8:8:17.89:208,18,0	0/0:21,0:21:63.21:0,63,1179	0/0:29,0:29:87.21:0,87,1616	0/0:19,0:19:54.19:0,54,1042	0/0:23,0:23:69.22:0,69,1299	0/0:25,0:25:75.25:0,75,1411	1/1:1,29:30:87.29:1320,87,0	0/0:16,0:16:45.14:0,45,836
chr10	49477441	.	CTAAT	C	6820.37	PASS	AB=0.564;AC=11;AF=0.204;AN=54;BaseQRankSum=17.059;DP=575;FS=5.024;HRun=0;HaplotypeScore=140.5255;InbreedingCoeff=0.8854;MQ=67.15;MQ0=0;MQRankSum=-16.704;QD=44.29;ReadPosRankSum=-0.367;VQSLOD=5.3182;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:87.28:0,87,2288	1/1:3,8:11:26.96:442,27,0	0/0:24,0:24:63.65:0,64,1550	0/0:12,0:12:36.12:0,36,912	0/0:25,0:25:75.24:0,75,1980	0/0:22,0:22:66.23:0,66,1803	0/0:14,0:14:42.12:0,42,1022	1/1:3,26:29:62.72:1111,63,0	0/0:19,0:19:57.20:0,57,1552	0/0:17,0:17:51.18:0,51,1386	0/0:22,0:22:63.15:0,63,1550	0/0:25,0:25:69.22:0,69,1801	0/0:21,0:21:63.20:0,63,1649	0/0:13,0:13:36.10:0,36,872	0/1:7,24:31:80.19:1345,0,80	0/0:21,0:21:60.18:0,60,1523	0/0:14,0:14:42.14:0,42,1149	0/0:10,0:10:30.09:0,30,739	1/1:2,17:19:53.98:760,54,0	1/1:5,30:35:93.19:1716,93,0	./.	0/0:24,0:24:69.24:0,69,1859	0/0:25,0:25:75.24:0,75,1960	0/0:16,0:16:45.13:0,45,1169	0/0:21,0:21:63.21:0,63,1669	0/0:30,0:30:87.30:0,87,2378	1/1:0,29:29:75.26:1447,75,0	0/0:13,0:13:39.13:0,39,1067
chr10	49478521	.	GAGTAAAA	G	5501.54	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=12.701;DP=507;FS=5.133;HRun=0;HaplotypeScore=134.2545;InbreedingCoeff=0.9847;MQ=94.60;MQ0=0;MQRankSum=-11.914;QD=57.91;ReadPosRankSum=1.888;VQSLOD=4.9144;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:90.31:0,90,3579	1/1:0,6:6:18.06:468,18,0	0/0:27,0:27:74.58:0,75,2426	0/0:23,0:23:51.44:0,51,2070	0/0:26,0:26:75.26:0,75,2915	0/0:29,0:29:87.30:0,87,3450	0/0:20,0:20:57.20:0,57,2162	1/1:3,19:22:54.13:1254,54,0	0/0:17,0:17:51.18:0,51,2040	0/0:23,0:23:66.23:0,66,2585	0/0:20,0:20:57.20:0,57,2101	0/0:12,0:12:33.11:0,33,1333	0/0:15,0:15:45.15:0,45,1770	0/0:12,0:12:36.12:0,36,1424	1/1:2,21:23:66.23:1707,66,0	0/0:19,0:19:57.20:0,57,2257	0/0:28,0:28:81.26:0,81,2956	0/0:11,0:11:33.11:0,33,1323	1/1:3,4:7:12.04:316,12,0	1/1:0,8:8:18.02:415,18,0	1/1:4,12:16:11.45:316,11,0	0/0:14,0:14:42.14:0,42,1607	0/0:22,0:22:66.23:0,66,2642	0/0:25,0:25:72.23:0,72,2733	0/0:15,0:15:45.15:0,45,1739	0/0:13,0:13:39.13:0,39,1480	1/1:1,12:13:39.13:1026,39,0	0/0:10,0:10:30.10:0,30,1196
chr10	49478578	.	CA	C	3158.70	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=15.057;DP=575;FS=7.826;HRun=7;HaplotypeScore=81.8514;InbreedingCoeff=0.9992;MQ=77.61;MQ0=0;MQRankSum=-3.624;QD=25.27;ReadPosRankSum=-2.381;VQSLOD=2.9244;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,105,1299	1/1:1,7:8:21.05:214,21,0	0/0:30,0:30:72.23:0,72,892	0/0:15,0:15:42.13:0,42,508	0/0:26,0:26:75.24:0,75,937	0/0:31,0:31:90.29:0,90,1132	0/0:17,0:17:48.15:0,48,604	1/1:1,27:28:81.18:826,81,0	0/0:25,0:25:72.22:0,72,893	0/0:19,0:19:57.18:0,57,717	0/0:16,0:16:45.14:0,45,555	0/0:20,0:20:60.19:0,60,754	0/0:19,0:19:54.17:0,54,678	0/0:26,0:26:78.23:0,78,967	1/1:3,21:24:63.14:641,63,0	0/0:21,0:21:60.18:0,60,743	0/0:16,0:16:48.15:0,48,603	0/0:18,0:18:51.12:0,51,624	1/1:4,12:16:36.08:367,36,0	1/1:2,15:17:42.09:427,42,0	1/1:2,16:18:48.11:489,48,0	0/0:18,0:18:51.16:0,51,635	0/0:29,0:29:78.24:0,78,970	0/0:20,0:20:57.17:0,57,705	0/0:16,0:16:48.13:0,48,589	0/0:21,0:21:54.17:0,54,679	1/1:1,13:14:39.08:394,39,0	0/0:12,0:12:36.11:0,36,451
chr10	49478725	.	ACT	A	619.59	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.456;DP=595;FS=1.894;HRun=0;HaplotypeScore=81.2269;InbreedingCoeff=0.9338;MQ=89.18;MQ0=0;MQRankSum=-2.272;QD=34.42;ReadPosRankSum=0.969;VQSLOD=5.9733;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:90.31:0,90,1610	0/0:4,0:4:11.99:0,12,114	0/0:27,0:27:81.21:0,81,1316	0/0:22,0:22:63.12:0,63,1066	0/0:16,0:16:48.16:0,48,845	0/0:33,0:33:90.31:0,90,1606	0/0:27,0:27:75.24:0,75,1317	0/0:18,0:18:54.02:0,54,495	0/0:25,0:25:75.24:0,75,1283	0/0:22,0:22:66.23:0,66,1188	0/0:10,0:10:27.09:0,27,471	0/0:25,0:25:75.26:0,75,1336	0/0:31,0:31:90.31:0,90,1611	0/0:24,0:24:69.24:0,69,1236	0/0:22,1:22:12.04:0,12,461	1/1:0,18:18:51.17:714,51,0	0/0:26,0:26:78.27:0,78,1396	0/0:21,0:21:63.22:0,63,1128	0/0:15,0:15:42.07:0,42,418	0/0:15,0:15:45.09:0,45,464	0/0:34,0:34:99:0,102,1004	0/0:22,0:22:66.23:0,66,1182	0/0:13,0:13:39.13:0,39,702	0/0:30,0:30:90.31:0,90,1620	0/0:19,0:19:54.17:0,54,945	0/0:15,0:15:45.15:0,45,784	0/0:23,0:23:43.29:0,43,678	0/0:7,0:7:18.06:0,18,324
chr10	49478881	.	TCCTGCTGCCCTTGGAGAAGGCTG	T	7924.04	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=11.575;DP=606;FS=5.199;HRun=0;HaplotypeScore=350.7914;InbreedingCoeff=0.9201;MQ=89.81;MQ0=0;MQRankSum=-7.424;QD=72.70;ReadPosRankSum=1.447;VQSLOD=3.1337;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,135,13201	1/1:1,6:7:3.01:188,3,0	0/0:22,0:22:57.16:0,57,2728	0/0:26,0:28:0.87:0,1,3364	0/0:21,0:21:60.21:0,60,5230	0/0:19,0:19:54.18:0,54,5158	0/0:28,0:28:72.25:0,72,7298	1/1:12,9:21:27.05:486,27,0	0/0:25,0:25:72.25:0,72,6969	0/0:18,0:18:51.18:0,51,4199	0/0:12,0:12:30.10:0,30,2789	0/0:29,0:29:78.24:0,78,7315	0/0:30,0:30:87.30:0,87,8049	0/0:27,0:27:78.25:0,78,7185	1/1:7,17:24:36.12:2255,36,0	0/0:21,0:21:63.22:0,63,5836	0/0:28,0:28:81.28:0,81,7436	0/0:20,0:20:57.20:0,57,4883	1/1:7,7:14:18.06:983,18,0	1/1:2,5:7:15.05:940,15,0	1/1:7,15:22:21.07:1193,21,0	0/0:23,0:23:60.21:0,60,5759	0/0:14,0:14:39.13:0,39,2928	0/0:28,0:28:78.25:0,78,7752	0/0:17,0:17:48.16:0,48,4778	0/0:25,0:25:63.22:0,63,5542	1/1:2,12:14:30.10:1879,30,0	0/0:12,0:12:36.12:0,36,3522
chr10	49479917	.	GACAC	G	993.51	PASS	AB=0.898;AC=21;AF=0.420;AN=50;BaseQRankSum=3.411;DP=550;FS=1.892;HRun=0;HaplotypeScore=122.0484;InbreedingCoeff=0.5416;MQ=69.82;MQ0=7;MQRankSum=-4.168;QD=4.28;ReadPosRankSum=2.724;VQSLOD=2.1652;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:43:17.77:0,18,250	0/0:8,0:8:2.78:0,3,39	./.	./.	1/1:18,3:22:6.01:74,6,0	0/1:15,0:15:0:0,0,0	1/1:27,1:33:5.95:74,6,0	0/0:21,0:21:2.49:0,2,6	0/0:13,0:14:12.04:0,12,199	1/1:22,3:25:8.31:137,8,0	1/1:13,1:13:3.01:46,3,0	0/0:11,0:11:3.01:0,3,48	0/0:10,0:9:3.48:0,3,52	1/1:13,4:17:11.74:178,12,0	0/1:23,0:30:5.41:5,0,90	1/1:7,0:17:21.02:195,21,0	1/1:22,4:24:11.70:183,12,0	0/1:13,2:15:13.52:83,0,14	0/0:12,0:12:3.01:0,3,70	0/0:15,0:15:15.03:0,15,283	0/0:36,0:37:32.83:0,33,533	0/0:14,0:14:9.03:0,9,157	0/0:16,0:14:5.99:0,6,100	0/0:19,0:19:11.97:0,12,167	1/1:12,4:16:9.03:138,9,0	./.	0/0:21,0:21:19.04:0,19,325	1/1:1,1:2:3.01:46,3,0
chr10	49479969	.	C	CACACACAT	4056.03	PASS	AB=1.000;AC=26;AF=0.464;AN=56;BaseQRankSum=-8.517;DP=504;FS=3.545;HRun=0;HaplotypeScore=153.3604;InbreedingCoeff=0.3166;MQ=70.16;MQ0=14;MQRankSum=0.222;QD=14.54;ReadPosRankSum=1.134;VQSLOD=2.8923;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:77.85:0,78,709	0/0:4,0:4:5.97:0,6,50	0/0:24,0:11:19.08:0,19,219	0/0:32,0:24:39.72:0,40,432	0/1:17,0:17:33.75:227,0,34	1/1:14,0:13:29.95:245,30,0	0/1:23,0:23:63.50:316,0,63	0/0:17,0:16:44.09:0,44,381	0/0:3,0:19:6.50:0,7,43	0/1:14,0:14:59.15:248,0,59	1/1:14,0:14:1.67:228,2,0	1/1:2,13:20:3.01:133,3,0	1/1:4,14:18:5.78:266,6,0	0/1:10,0:10:47.25:120,0,47	0/0:23,0:23:57.49:0,57,758	0/1:20,0:20:62:62,0,227	0/1:27,0:27:72.04:399,0,72	0/1:17,0:16:27.72:202,0,28	0/0:16,0:16:41.97:0,42,378	0/0:15,0:15:30.43:0,30,249	0/0:31,0:30:68.82:0,69,583	1/1:17,0:17:32.68:424,33,0	1/1:11,0:10:8.97:73,9,0	1/1:27,0:27:59.85:659,60,0	0/1:10,0:10:73.76:102,0,74	1/1:11,0:9:26.97:234,27,0	0/0:12,0:12:29.73:0,30,427	1/1:7,0:7:16.94:118,17,0
chr10	49480347	.	TCTCTCTCTCTCG	T	2235.32	PASS	AB=1.000;AC=10;AF=0.179;AN=56;BaseQRankSum=3.919;DP=466;FS=1.209;HRun=0;HaplotypeScore=188.3586;InbreedingCoeff=0.7484;MQ=78.80;MQ0=15;MQRankSum=-5.738;QD=24.30;ReadPosRankSum=-1.224;VQSLOD=2.8238;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:66.20:0,66,2450	0/0:7,0:7:15.93:0,16,66	0/0:31,0:23:36.23:0,36,1001	0/0:52,0:30:50.43:0,50,826	0/0:19,0:16:45.09:0,45,1134	1/1:0,19:19:18.06:482,18,0	1/1:1,18:19:15.05:353,15,0	0/1:20,0:20:19.77:20,0,188	1/1:11,7:18:45.12:1072,45,0	0/0:15,0:15:42.13:0,42,1689	0/0:16,0:14:32.68:0,33,1302	0/0:21,0:21:57.15:0,57,1616	0/0:14,0:14:24.24:0,24,856	0/0:18,0:16:30.17:0,30,1043	0/1:7,0:7:7.41:7,0,60	1/1:9,0:9:27.03:466,27,0	0/0:18,0:17:48.05:0,48,1259	0/0:8,0:8:18.02:0,18,592	0/0:8,0:8:16.65:0,17,121	0/0:14,0:14:25.42:0,25,292	0/0:9,0:9:13.70:0,14,104	0/0:13,0:13:24.54:0,25,694	0/0:8,0:8:15.03:0,15,452	0/0:21,0:20:33.04:0,33,966	0/0:10,0:10:18.05:0,18,551	0/0:17,0:17:51.16:0,51,1726	0/0:11,0:11:17.61:0,18,182	0/0:20,0:20:51.05:0,51,1438
chr10	49480353	.	TCTCTCGCC	T	2158.04	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=8.452;DP=467;FS=25.584;HRun=0;HaplotypeScore=153.0338;InbreedingCoeff=0.9392;MQ=73.35;MQ0=20;MQRankSum=-9.077;QD=16.99;ReadPosRankSum=-0.108;VQSLOD=1.4867;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:63.18:0,63,2219	1/1:7,0:7:17.87:147,18,0	0/0:39,0:23:43.05:0,43,863	0/0:59,0:27:16.28:0,16,464	0/0:19,0:16:30.10:0,30,1088	1/1:19,0:19:17.84:172,18,0	1/1:18,0:18:6.78:107,7,0	1/1:16,0:16:28.65:497,29,0	1/1:17,0:17:31.75:336,32,0	0/0:16,0:16:39.13:0,39,1610	0/0:17,0:15:20.38:0,20,1289	0/0:22,0:22:48.12:0,48,1600	0/0:15,0:15:8.62:0,9,819	0/0:17,0:15:20.76:0,21,1119	1/1:7,0:7:20.47:182,20,0	1/1:3,4:7:11.90:224,12,0	0/0:15,0:14:33.09:0,33,1173	0/0:8,0:8:21.05:0,21,689	1/1:8,0:8:14.24:154,14,0	1/1:13,0:13:15.99:248,16,0	1/1:7,0:6:9:91,9,0	0/0:14,0:14:23.97:0,24,760	0/0:8,0:8:12.04:0,12,463	0/0:24,0:23:39.98:0,40,1055	0/0:8,0:8:15.05:0,15,544	0/0:16,0:16:48.16:0,48,1727	1/1:8,0:8:9.82:216,10,0	0/0:19,0:19:33.11:0,33,1378
chr10	49480357	.	TCGCC	T	584.24	PASS	AB=0.960;AC=15;AF=0.268;AN=56;BaseQRankSum=5.805;DP=447;FS=0.669;HRun=0;HaplotypeScore=128.0883;InbreedingCoeff=0.5770;MQ=70.32;MQ0=21;MQRankSum=-4.698;QD=5.78;ReadPosRankSum=-2.151;VQSLOD=2.3445;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:63.65:0,64,1484	1/1:7,0:7:2.94:11,3,0	0/0:37,0:21:28.24:0,28,553	0/0:58,0:23:1.39:0,1,348	0/0:19,0:16:30.10:0,30,691	0/1:19,0:19:0.14:11,0,0	0/0:18,0:18:0.24:0,0,2	1/1:10,2:12:28.24:347,28,0	0/1:15,0:15:10.64:26,0,11	0/0:15,0:14:39.13:0,39,1042	0/0:17,0:15:20.41:0,20,832	0/0:18,0:18:48.03:0,48,1104	0/0:15,0:15:32.56:0,33,617	0/0:18,0:16:21.04:0,21,736	0/1:7,0:7:1.61:46,0,2	1/1:7,0:7:7.66:87,8,0	0/0:12,0:11:33.08:0,33,772	0/0:8,0:8:21.07:0,21,465	1/1:7,0:6:2.70:90,3,0	0/1:13,0:13:2.23:24,0,2	1/1:5,1:5:8.89:65,9,0	0/0:13,0:13:23.98:0,24,563	0/0:8,0:8:12.04:0,12,301	0/0:25,0:24:40:0,40,775	0/0:8,0:8:15.05:0,15,369	0/0:16,0:16:48.16:0,48,1177	0/1:6,2:8:1.05:39,0,1	0/0:17,0:17:33.11:0,33,902
chr10	49480360	.	C	CT	1770.25	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=7.531;DP=452;FS=24.184;HRun=0;HaplotypeScore=115.6746;InbreedingCoeff=0.9410;MQ=67.89;MQ0=22;MQRankSum=-6.601;QD=32.19;ReadPosRankSum=0.595;VQSLOD=1.9521;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:49.49:0,49,783	1/1:7,0:7:17.79:283,18,0	0/0:37,0:20:47.70:0,48,458	0/0:54,1:19:17.89:0,18,287	0/0:19,0:16:30.10:0,30,412	0/0:23,0:23:22.47:0,22,178	0/0:19,0:19:17.73:0,18,165	1/1:3,7:9:27.06:343,27,0	0/0:18,0:18:15.58:0,16,291	0/0:16,0:15:39.13:0,39,546	0/0:18,0:16:33.58:0,34,463	0/0:17,0:17:45.15:0,45,617	0/0:16,0:15:33.06:0,33,421	0/0:18,0:16:33.89:0,34,438	1/1:7,0:7:14.14:276,14,0	0/0:10,0:10:21.36:0,21,211	0/0:12,0:11:30.10:0,30,419	0/0:8,0:8:21.07:0,21,293	1/1:2,4:5:13.81:146,14,0	1/1:2,11:13:33.11:520,33,0	1/1:2,1:2:3.01:47,3,0	0/0:13,0:13:24.08:0,24,334	0/0:8,0:8:12.04:0,12,168	0/0:26,0:24:37.16:0,37,481	0/0:8,0:8:14.81:0,15,194	0/0:17,0:17:48.16:0,48,671	1/1:4,5:9:24.38:345,24,0	0/0:14,0:14:33.11:0,33,461
chr10	49480366	.	CTCTCT	C	290.70	PASS	AB=0.964;AC=11;AF=0.196;AN=56;BaseQRankSum=7.830;DP=451;FS=31.171;HRun=0;HaplotypeScore=141.2344;InbreedingCoeff=0.4060;MQ=66.73;MQ0=25;MQRankSum=-6.066;QD=4.93;ReadPosRankSum=0.317;VQSLOD=1.0786;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:25:60.01:0,60,1876	1/1:7,0:7:9.46:38,9,0	0/0:34,0:19:41.60:0,42,833	0/0:53,0:18:27.82:0,28,367	0/0:21,0:18:30.09:0,30,813	0/0:22,0:21:7.58:0,8,51	0/0:17,0:17:8.03:0,8,39	1/1:3,2:4:11.95:142,12,0	0/0:20,0:20:1.89:0,2,48	0/0:17,0:16:45.15:0,45,1386	0/0:19,0:17:33.11:0,33,950	0/0:18,0:18:48.11:0,48,1234	0/0:16,0:15:33.05:0,33,775	0/0:18,0:16:33.47:0,33,815	0/1:8,0:8:7.28:53,0,7	0/1:11,0:11:18.05:18,0,62	0/0:13,0:12:36.08:0,36,925	0/0:8,0:8:21.07:0,21,572	0/1:4,0:3:0.18:11,0,0	0/1:12,0:12:23.90:74,0,24	1/1:2,1:2:2.99:24,3,0	0/0:14,0:14:33.07:0,33,697	0/0:12,0:11:11.55:0,12,307	0/0:24,0:23:27.92:0,28,659	0/0:8,0:8:12.04:0,12,359	0/0:15,0:15:42.13:0,42,1265	0/1:7,2:9:13.31:81,0,13	0/0:15,0:15:36.12:0,36,1042
chr10	49480402	.	CTCTCTCTCTCTCTT	C	3805.55	PASS	AB=1.000;AC=38;AF=0.760;AN=50;BaseQRankSum=3.419;DP=429;FS=0.812;HRun=0;HaplotypeScore=174.6331;InbreedingCoeff=0.4165;MQ=45.26;MQ0=37;MQRankSum=1.622;QD=12.36;ReadPosRankSum=0.005;VQSLOD=2.7544;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:60.51:0,61,1738	0/0:3,0:3:2.94:0,3,18	0/0:32,0:4:0.84:0,1,30	0/0:47,0:3:2.04:0,2,30	1/1:8,16:20:3.01:33,3,0	1/1:27,1:27:28.63:318,29,0	1/1:9,0:9:8.24:48,8,0	./.	1/1:18,1:19:5.99:157,6,0	1/1:19,0:17:38.96:417,39,0	1/1:16,1:15:2.99:117,3,0	1/1:12,0:12:25.29:204,25,0	1/1:13,0:12:23.60:293,24,0	1/1:6,10:13:11.86:371,12,0	0/1:5,0:5:19.63:20,0,28	0/1:12,0:12:34.79:75,0,35	1/1:11,0:10:20.71:262,21,0	1/1:8,0:8:11.74:134,12,0	./.	0/0:4,0:4:6.02:0,6,117	./.	1/1:20,0:20:2.73:309,3,0	1/1:17,0:16:1.65:3,2,0	1/1:25,0:23:6.41:204,6,0	1/1:16,0:16:18.03:296,18,0	1/1:7,13:18:35.65:356,36,0	1/1:5,0:5:3.01:43,3,0	1/1:12,0:9:14.96:147,15,0
chr10	49480406	.	CTCTCTCTCTT	C	2527.11	PASS	AB=0.979;AC=38;AF=0.760;AN=50;BaseQRankSum=3.899;DP=428;FS=11.437;HRun=0;HaplotypeScore=147.7776;InbreedingCoeff=0.3627;MQ=48.17;MQ0=36;MQRankSum=3.030;QD=7.54;ReadPosRankSum=-1.108;VQSLOD=1.8930;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:25:61.59:0,62,1440	./.	0/1:39,0:7:2.43:2,0,39	0/0:53,0:5:8.05:0,8,91	1/1:22,0:18:3:29,3,0	0/1:29,0:28:3.40:282,0,3	1/1:9,0:9:8.96:71,9,0	./.	1/1:7,12:19:6.02:113,6,0	1/1:20,0:18:28.95:348,29,0	1/1:17,0:15:3:69,3,0	0/1:10,0:10:7.38:119,0,7	1/1:11,0:10:8.10:151,8,0	1/1:16,0:13:8.03:185,8,0	0/0:5,0:5:3.01:0,3,31	0/1:10,1:11:14.88:125,0,15	1/1:13,0:12:2.50:139,2,0	1/1:9,0:9:14.20:105,14,0	1/1:4,0:2:5.98:47,6,0	0/0:4,0:4:6.02:0,6,86	./.	1/1:20,0:20:17.87:202,18,0	1/1:15,0:14:1.19:2,1,0	1/1:21,0:19:6.02:147,6,0	1/1:17,0:17:20.96:181,21,0	1/1:19,0:17:29.04:215,29,0	1/1:1,0:1:2.96:19,3,0	1/1:13,0:10:16.76:123,17,0
chr10	49480414	.	CTT	C	2623.93	PASS	AB=1.000;AC=45;AF=0.804;AN=56;BaseQRankSum=2.010;DP=430;FS=18.377;HRun=3;HaplotypeScore=111.2329;InbreedingCoeff=0.4155;MQ=48.40;MQ0=31;MQRankSum=2.202;QD=7.81;ReadPosRankSum=1.037;VQSLOD=-0.5440;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:27:29.88:0,30,522	1/1:1,0:1:2.94:18,3,0	0/1:48,0:9:1.99:2,0,57	0/0:62,0:10:15.28:0,15,144	1/1:20,0:16:2.94:18,3,0	1/1:24,0:24:20.43:323,20,0	0/1:6,0:6:3.74:62,0,4	1/1:10,0:9:26.84:202,27,0	0/1:14,0:14:9.01:14,0,9	1/1:16,0:15:44.28:411,44,0	1/1:4,8:10:2.90:16,3,0	1/1:8,1:9:12.47:156,12,0	1/1:8,1:9:4.39:97,4,0	1/1:14,0:12:9.34:69,9,0	0/0:3,0:3:5.38:0,5,44	1/1:10,0:10:18.14:110,18,0	1/1:11,0:10:25.07:182,25,0	1/1:8,0:8:16.70:118,17,0	1/1:2,5:5:11.98:100,12,0	0/1:9,0:9:14.49:68,0,14	1/1:5,0:4:1.55:4,2,0	1/1:20,0:20:12.65:120,13,0	0/1:14,0:14:0.29:0,0,0	1/1:20,0:19:5.87:35,6,0	1/1:16,0:16:29.94:252,30,0	1/1:15,0:14:27.07:204,27,0	1/1:8,0:8:11.59:68,12,0	1/1:10,0:7:17.32:126,17,0
chr10	49480452	.	TCTTCCTTCCTTCCTTCCTTCCTTC	T	2999.18	PASS	AB=0.941;AC=9;AF=0.161;AN=56;BaseQRankSum=-0.472;DP=551;FS=1.152;HRun=0;HaplotypeScore=356.6334;InbreedingCoeff=0.0132;MQ=46.59;MQ0=8;MQRankSum=-4.588;QD=28.84;ReadPosRankSum=-1.203;VQSLOD=0.9803;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:8.69:0,9,3738	0/1:6,0:6:99:331,0,154	0/0:17,0:5:2.68:0,3,74	0/0:35,0:12:26.52:0,27,546	0/0:28,0:28:62.02:0,62,2348	0/0:26,0:26:41.81:0,42,1830	0/0:18,0:18:51.16:0,51,894	0/1:7,16:21:99:599,0,208	0/0:20,0:20:27.04:0,27,1359	0/0:25,0:25:66.21:0,66,1705	0/0:21,0:19:39.04:0,39,1227	0/0:13,0:13:12.18:0,12,922	0/0:14,0:14:27.56:0,28,769	0/0:19,0:19:36.05:0,36,1468	0/1:7,0:7:32.86:530,0,33	0/0:20,0:20:48.50:0,48,1374	0/0:18,0:18:44.99:0,45,1252	0/1:13,0:13:6.11:6,0,902	0/1:7,0:7:99:161,0,257	0/1:28,0:22:99:618,0,708	1/1:5,0:4:6.02:176,6,0	0/0:32,0:32:15.69:0,16,2001	0/0:24,0:24:35.50:0,35,1158	0/0:28,0:28:32.71:0,33,1694	0/0:26,0:25:51.15:0,51,1567	0/0:24,0:23:60.15:0,60,1900	0/1:15,0:14:99:715,0,252	0/0:12,0:12:36.11:0,36,1657
chr10	49480636	.	CT	C	4555.25	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=9.661;DP=541;FS=12.812;HRun=2;HaplotypeScore=57.2483;InbreedingCoeff=0.9672;MQ=82.43;MQ0=0;MQRankSum=-1.532;QD=35.04;ReadPosRankSum=0.986;VQSLOD=4.0579;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:96.31:0,96,1417	1/1:0,6:6:18.06:226,18,0	0/0:20,0:20:48.63:0,49,684	0/0:25,0:25:63.18:0,63,851	0/0:25,0:25:72.14:0,72,997	0/0:18,0:18:51.15:0,51,725	0/0:19,0:19:57.17:0,57,810	1/1:2,26:28:78.22:983,78,0	0/0:25,0:25:72.24:0,72,1075	0/0:18,0:18:51.17:0,51,765	0/0:17,0:17:51.17:0,51,757	0/0:19,0:19:57.18:0,57,836	0/0:13,0:13:33.10:0,33,475	0/0:17,0:17:51.17:0,51,761	1/1:0,16:16:42.14:545,42,0	0/0:31,0:31:78.25:0,78,1147	0/0:17,0:17:48.15:0,48,699	0/0:21,0:21:57.19:0,57,854	1/1:0,18:18:54.18:699,54,0	1/1:0,24:24:60.20:778,60,0	1/1:0,22:22:57.19:740,57,0	0/0:17,0:17:51.16:0,51,741	0/0:20,0:20:60.18:0,60,860	0/0:17,0:17:48.14:0,48,697	0/0:19,0:18:54.18:0,54,807	0/0:19,0:19:57.19:0,57,822	1/1:0,16:16:45.15:583,45,0	0/0:1,0:1:3.01:0,3,45
chr10	49481206	.	G	GA	3531.48	PASS	AB=0.700;AC=35;AF=0.700;AN=50;BaseQRankSum=-2.610;DP=405;FS=0.000;HRun=10;HaplotypeScore=110.8724;InbreedingCoeff=0.7651;MQ=38.76;MQ0=24;MQRankSum=0.770;QD=11.62;ReadPosRankSum=0.058;VQSLOD=2.9802;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:18:15.91:0,16,143	./.	./.	0/0:1,0:1:2.50:0,2,9	1/1:20,8:27:35.63:325,36,0	1/1:5,1:18:25.73:145,26,0	1/1:11,3:19:42.76:275,43,0	0/0:4,0:9:12.22:0,12,36	1/1:8,0:10:8.99:44,9,0	1/1:16,7:21:32.71:292,33,0	1/1:11,9:19:27:264,27,0	1/1:8,4:12:17.47:160,17,0	1/1:6,2:6:6.90:66,7,0	1/1:8,7:15:23.26:223,23,0	0/0:6,0:9:4.07:0,4,12	1/1:11,0:13:16.92:97,17,0	0/1:8,6:11:7.22:110,0,7	1/1:9,4:11:20.64:202,21,0	0/0:6,0:16:16.29:0,16,48	0/0:5,0:11:5.88:0,6,17	./.	1/1:8,7:15:22.27:215,22,0	1/1:24,3:27:17.98:172,18,0	1/1:9,3:11:12.03:128,12,0	1/1:12,13:24:17.43:373,17,0	1/1:13,6:19:10.59:270,11,0	0/0:9,0:15:9.77:0,10,28	1/1:4,4:7:17.99:171,18,0
chr10	49481239	.	AAAAG	A	648.98	PASS	AB=0.983;AC=20;AF=0.357;AN=56;BaseQRankSum=4.249;DP=493;FS=8.916;HRun=0;HaplotypeScore=106.3913;InbreedingCoeff=-0.2056;MQ=48.74;MQ0=17;MQRankSum=-6.614;QD=2.02;ReadPosRankSum=1.380;VQSLOD=1.5452;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:25:22.37:0,22,470	0/0:4,0:4:4.46:0,4,21	0/0:20,0:8:17.03:0,17,191	0/0:11,0:5:8.15:0,8,86	0/1:23,0:23:46.82:76,0,47	0/0:13,0:12:8.58:0,9,77	0/1:14,0:13:21.04:21,0,24	0/1:29,0:28:73.20:73,0,83	0/0:14,0:13:0.52:0,1,41	0/1:28,0:27:45.99:46,0,170	0/1:23,0:23:33.49:33,0,41	0/0:16,0:16:20.52:0,21,134	0/1:9,0:7:16.06:16,0,48	0/1:18,1:19:27.53:30,0,28	1/1:19,0:16:3.18:96,3,0	0/1:12,0:12:8.45:8,0,110	0/1:17,1:15:24.10:24,0,115	0/1:11,2:13:54.12:62,0,54	0/1:29,0:29:67.68:70,0,68	0/1:22,0:21:42.59:43,0,66	1/1:5,0:5:3.34:20,3,0	0/0:13,0:13:19.32:0,19,129	0/0:20,0:20:20.95:0,21,177	0/0:8,0:7:13.48:0,13,95	0/0:25,0:24:16.37:0,16,205	0/1:25,0:24:48.19:60,0,48	0/1:26,0:26:5.88:105,0,6	1/1:7,0:6:5.37:24,5,0
chr10	49481247	.	A	AG	1141.02	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=4.499;DP=386;FS=3.372;HRun=1;HaplotypeScore=77.0512;InbreedingCoeff=0.9163;MQ=67.96;MQ0=8;MQRankSum=-2.280;QD=12.01;ReadPosRankSum=-0.614;VQSLOD=1.9088;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:39.10:0,39,476	0/0:1,0:1:0:0,0,0	0/0:25,0:13:35:0,35,342	0/0:14,0:8:18:0,18,192	0/0:17,0:17:45.12:0,45,550	0/0:8,0:8:21.05:0,21,246	0/0:7,0:7:18.06:0,18,230	1/1:7,13:20:40.93:303,41,0	0/0:10,0:10:18.05:0,18,221	0/0:19,0:19:43.90:0,44,536	0/0:13,0:14:24.06:0,24,294	0/0:13,0:13:39.12:0,39,492	0/0:8,0:8:17.97:0,18,211	0/0:13,0:13:30.08:0,30,374	1/1:16,0:14:26.46:185,26,0	0/0:10,0:10:24.07:0,24,298	0/0:15,0:12:30.04:0,30,359	0/0:14,0:14:32.88:0,33,356	1/1:19,1:20:37.66:242,38,0	1/1:2,16:18:32.72:252,33,0	1/1:5,0:5:2.97:21,3,0	0/0:15,0:16:33.09:0,33,403	0/0:14,0:14:36.09:0,36,432	0/0:8,0:7:18.05:0,18,220	0/0:19,0:18:45.13:0,45,556	0/0:22,0:21:40:0,40,483	1/1:16,0:16:41.13:316,41,0	0/0:6,0:6:12.01:0,12,126
chr10	49482075	.	ATT	A	3466.43	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=14.018;DP=619;FS=1.464;HRun=3;HaplotypeScore=98.5748;InbreedingCoeff=0.9841;MQ=90.55;MQ0=0;MQRankSum=-13.781;QD=36.49;ReadPosRankSum=0.133;VQSLOD=3.3084;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,163,3059	0/0:8,0:8:24.08:0,24,464	0/0:25,0:25:75.26:0,75,1435	0/0:27,0:27:75.22:0,75,1363	0/0:18,0:18:54.19:0,54,1043	0/0:30,0:30:87.26:0,87,1643	0/0:22,0:22:66.23:0,66,1275	1/1:4,14:18:42.14:641,42,0	0/0:19,0:19:57.20:0,57,1094	0/0:11,0:11:33.11:0,33,608	0/0:12,0:12:36.12:0,36,688	0/0:22,0:22:63.20:0,63,1183	0/0:22,0:22:63.21:0,63,1185	0/0:28,0:28:78.27:0,78,1492	0/0:31,0:31:93.32:0,93,1790	0/0:14,0:14:42.13:0,42,780	0/0:40,0:40:99:0,120,2319	0/0:30,0:30:87.30:0,87,1681	1/1:3,14:17:42.14:633,42,0	1/1:1,14:15:42.14:639,42,0	1/1:6,7:13:18.06:274,18,0	0/0:16,0:16:48.16:0,48,928	0/0:11,0:11:33.11:0,33,632	0/0:31,0:31:93.30:0,93,1714	0/0:21,0:21:60.20:0,60,1120	0/0:29,0:29:84.26:0,84,1556	1/1:4,28:32:84.28:1279,84,0	0/0:3,0:3:9.03:0,9,174
chr10	49482081	.	ACTG	A	3521.02	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=13.652;DP=586;FS=0.463;HRun=0;HaplotypeScore=106.6142;InbreedingCoeff=0.9787;MQ=90.68;MQ0=0;MQRankSum=-13.611;QD=45.73;ReadPosRankSum=1.072;VQSLOD=5.1510;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,163,3963	0/0:8,0:8:24.08:0,24,592	0/0:23,0:23:69.24:0,69,1605	0/0:26,0:26:75.26:0,75,1750	0/0:18,0:18:54.17:0,54,1274	0/0:29,0:29:87.28:0,87,2047	0/0:22,0:22:66.21:0,66,1550	1/1:0,14:14:42.14:700,42,0	0/0:18,0:18:54.19:0,54,1331	0/0:11,0:11:33.11:0,33,777	0/0:12,0:12:36.12:0,36,887	0/0:20,0:20:60.21:0,60,1467	0/0:20,0:20:60.21:0,60,1470	0/0:22,0:22:66.23:0,66,1626	0/0:31,0:31:90.31:0,90,2218	0/0:14,0:14:42.14:0,42,1035	0/0:44,0:44:99:0,132,3217	0/0:29,0:29:87.28:0,87,2092	1/1:0,14:14:42.14:691,42,0	1/1:0,14:14:36.12:599,36,0	1/1:0,7:7:12.04:198,12,0	0/0:16,0:16:48.16:0,48,1183	0/0:11,0:11:33.10:0,33,763	0/0:26,0:26:78.27:0,78,1893	0/0:23,0:23:66.21:0,66,1548	0/0:28,0:28:81.28:0,81,1986	1/1:1,27:28:81.28:1332,81,0	0/0:3,0:3:9.03:0,9,222
chr10	49484019	.	CT	C	4522.01	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-9.116;DP=427;FS=3.463;HRun=3;HaplotypeScore=60.9109;InbreedingCoeff=0.9501;MQ=69.24;MQ0=0;MQRankSum=-0.154;QD=34.26;ReadPosRankSum=-0.479;VQSLOD=5.1725;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:75.25:0,75,1079	1/1:0,5:5:15.05:186,15,0	0/0:2,0:2:6.02:0,6,77	0/0:6,0:7:17.43:0,17,159	0/0:29,0:29:87.26:0,87,1214	0/0:14,0:14:42.14:0,42,605	0/0:7,0:7:21.05:0,21,283	1/1:1,32:33:96.29:1177,96,0	0/0:10,0:10:30.10:0,30,432	0/0:25,0:25:75.25:0,75,1079	0/0:27,0:27:81.26:0,81,1147	0/0:13,0:13:36.12:0,36,517	0/0:8,0:8:24.07:0,24,328	0/0:10,0:10:30.08:0,30,411	1/1:0,14:14:36.11:446,36,0	0/0:8,0:8:24.08:0,24,346	0/0:20,0:20:57.19:0,57,820	0/0:25,0:25:69.23:0,69,991	1/1:2,19:21:57.15:690,57,0	1/1:0,28:28:78.18:944,78,0	1/1:1,8:9:24.07:297,24,0	0/0:4,0:4:12.03:0,12,155	0/0:8,0:8:24.06:0,24,310	0/0:9,0:9:27.09:0,27,389	0/0:13,0:13:36.11:0,36,501	0/0:26,0:26:78.25:0,78,1092	1/1:0,22:22:63.20:781,63,0	0/0:4,0:4:6.02:0,6,86
chr10	49484634	.	C	CTCGTGTG	44633.38	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-6.131;DP=583;FS=6.538;HRun=0;HaplotypeScore=114.3761;InbreedingCoeff=0.9836;MQ=71.71;MQ0=0;MQRankSum=-13.770;QD=90.35;ReadPosRankSum=2.552;VQSLOD=6.1676;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,99,2669	1/1:3,3:6:15.05:532,15,0	0/0:28,0:28:69.24:0,69,1789	0/0:27,0:27:75.23:0,75,1761	1/1:6,13:22:36.12:1382,36,0	1/1:6,17:25:57.20:2282,57,0	1/1:4,7:13:30.10:1183,30,0	1/1:15,5:28:78.19:2172,78,0	1/1:6,10:19:30.10:1186,30,0	1/1:5,24:33:96.28:3470,96,0	1/1:2,13:15:36.12:1465,36,0	1/1:1,15:17:42.04:1711,42,0	1/1:5,14:19:48.16:1914,48,0	1/1:5,10:16:36.12:1466,36,0	1/1:7,26:34:87.30:3464,87,0	1/1:5,12:22:41.71:1711,42,0	1/1:7,4:11:30.10:1144,30,0	1/1:3,9:14:30.10:1225,30,0	1/1:16,7:24:69.24:2232,69,0	1/1:2,13:17:39.13:1589,39,0	1/1:6,5:12:21.03:671,21,0	1/1:4,18:22:60.21:2400,60,0	1/1:4,17:23:51.18:1994,51,0	1/1:8,7:16:15.05:611,15,0	1/1:4,18:25:57.20:2282,57,0	1/1:4,18:24:69.20:2528,69,0	1/1:4,24:29:84.29:3285,84,0	1/1:1,5:6:18.06:735,18,0
chr10	49484773	.	TGATACA	T	11618.92	PASS	AB=0.565;AC=35;AF=0.625;AN=56;BaseQRankSum=13.938;DP=504;FS=7.055;HRun=0;HaplotypeScore=119.5823;InbreedingCoeff=0.9195;MQ=99.52;MQ0=0;MQRankSum=-16.486;QD=49.65;ReadPosRankSum=1.958;VQSLOD=4.7483;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:81.28:0,81,2912	0/0:5,0:5:15.03:0,15,401	0/0:35,0:35:99:0,105,3529	0/0:29,0:29:81.83:0,82,2634	1/1:0,19:19:39.13:805,39,0	1/1:0,12:12:27.09:512,27,0	1/1:1,21:22:60.20:1384,60,0	0/0:21,0:21:57.20:0,57,1878	1/1:1,12:13:33.11:774,33,0	1/1:1,15:16:42.14:1032,42,0	1/1:1,12:13:30.10:701,30,0	1/1:1,6:7:6.02:148,6,0	1/1:0,12:12:29.67:737,30,0	1/1:0,6:6:9.03:221,9,0	0/0:34,0:34:99:0,102,3687	1/1:1,10:11:15.05:369,15,0	1/1:2,14:16:24.08:590,24,0	0/1:3,10:13:1.89:351,0,2	0/0:26,0:26:72.25:0,72,2541	0/0:23,0:23:69.24:0,69,2529	0/0:41,0:41:99:0,117,4283	1/1:0,13:13:33.04:732,33,0	1/1:1,11:12:33.11:755,33,0	1/1:2,12:14:11.72:277,12,0	1/1:2,12:14:39.13:902,39,0	1/1:0,12:12:30.10:738,30,0	0/0:28,0:27:84.29:0,84,3067	1/1:0,9:9:24.08:590,24,0
chr10	49485546	.	AGTGTGTGTGTGTGTGT	A	11572.60	PASS	AB=0.743;AC=39;AF=0.696;AN=56;BaseQRankSum=9.354;DP=656;FS=15.739;HRun=0;HaplotypeScore=255.9591;InbreedingCoeff=0.2038;MQ=61.80;MQ0=15;MQRankSum=-7.467;QD=23.71;ReadPosRankSum=2.547;VQSLOD=2.3925;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:37:63.16:0,63,3978	0/1:5,0:5:0:0,0,0	0/0:48,0:21:11.95:0,12,317	0/0:53,0:25:36.56:0,37,1082	0/1:10,1:23:4.39:118,0,4	1/1:7,15:22:15.05:542,15,0	1/1:7,13:20:11.39:497,11,0	0/1:18,0:17:14.33:14,0,31	1/1:4,24:29:30.02:1128,30,0	0/1:13,0:37:26.36:1195,0,26	0/1:4,1:13:13.93:199,0,14	1/1:5,19:24:32.69:1194,33,0	1/1:7,17:24:30.10:1037,30,0	1/1:4,1:20:1.75:369,2,0	1/1:3,0:16:11.24:361,11,0	1/1:8,22:30:32.69:1372,33,0	0/1:15,0:38:59.16:59,0,101	0/1:8,0:25:42.20:128,0,42	0/1:14,0:15:26.80:211,0,27	1/1:4,0:11:20.87:485,21,0	0/0:29,0:30:2.30:0,2,4	1/1:14,5:19:12.04:358,12,0	1/1:7,7:14:18.06:675,18,0	1/1:6,18:24:5.92:167,6,0	1/1:6,0:13:5.61:81,6,0	1/1:5,0:23:13.64:749,14,0	0/1:13,0:20:2.70:560,0,3	1/1:1,0:4:3.01:71,3,0
chr10	49485651	.	CTG	C	5313.34	PASS	AB=0.927;AC=11;AF=0.196;AN=56;BaseQRankSum=5.481;DP=886;FS=5.004;HRun=0;HaplotypeScore=176.3327;InbreedingCoeff=0.8402;MQ=65.09;MQ0=0;MQRankSum=3.184;QD=22.61;ReadPosRankSum=-1.058;VQSLOD=4.7521;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,1:47:97.59:0,98,2122	0/0:12,0:12:36.12:0,36,598	0/1:35,2:34:9.45:9,0,849	0/0:40,0:33:50.94:0,51,682	0/0:28,0:28:66.22:0,66,1068	0/0:20,0:20:57.19:0,57,934	0/0:31,0:31:81.28:0,81,1340	1/1:12,20:32:60.19:757,60,0	0/0:43,0:43:99:0,117,1928	0/0:26,1:27:2.89:0,3,1121	0/0:22,1:23:60.21:0,60,993	0/0:34,1:35:49.43:0,49,1353	0/0:27,0:27:66.22:0,66,1077	0/0:30,0:30:72.25:0,72,1195	0/0:35,0:35:96.31:0,96,1569	0/0:26,0:26:60.20:0,60,988	0/0:37,1:38:87.24:0,87,1388	0/0:34,0:34:90.31:0,90,1494	1/1:5,18:23:51.15:630,51,0	1/1:2,25:27:75.20:923,75,0	1/1:10,79:89:99:2237,183,0	0/0:30,0:30:87.30:0,87,1445	0/0:14,0:14:39.13:0,39,647	0/0:32,2:34:5.55:0,6,1169	0/0:30,0:30:87.30:0,87,1445	0/0:27,1:28:37.45:0,37,1159	1/1:6,20:25:60.19:757,60,0	0/0:17,0:17:45.15:0,45,746
chr10	49485922	.	T	TGAGAACCA	43792.47	PASS	AB=0.621;AC=49;AF=0.875;AN=56;BaseQRankSum=8.185;DP=508;FS=1.498;HRun=0;HaplotypeScore=175.5108;InbreedingCoeff=0.7874;MQ=84.23;MQ0=0;MQRankSum=-13.564;QD=104.52;ReadPosRankSum=3.426;VQSLOD=5.8667;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,105,2916	1/1:6,0:6:18.04:684,18,0	0/0:29,0:29:62.23:0,62,1884	0/0:22,0:23:54.07:0,54,1175	1/1:10,11:22:57.19:1974,57,0	1/1:5,9:15:42.14:1768,42,0	1/1:12,11:26:66.23:2706,66,0	1/1:26,0:26:75.26:2935,75,0	1/1:7,18:26:72.25:3063,72,0	1/1:11,9:24:63.14:2157,63,0	1/1:5,9:16:39.13:1581,39,0	1/1:7,10:18:48.16:2126,48,0	1/1:7,9:17:48.16:2026,48,0	1/1:4,8:14:36.12:1539,36,0	1/1:26,0:26:69.24:2860,69,0	1/1:6,6:12:30.10:1239,30,0	1/1:16,9:25:66.23:2487,66,0	1/1:9,9:19:48.16:1827,48,0	1/1:12,0:12:33.11:1270,33,0	1/1:17,0:17:42.14:1814,42,0	1/1:10,0:10:24.08:907,24,0	1/1:5,8:16:39.13:1510,39,0	1/1:3,10:14:33.11:1402,33,0	1/1:5,7:13:24.08:957,24,0	1/1:4,9:14:39.13:1632,39,0	0/1:7,10:18:32:1753,0,32	1/1:12,0:12:33.11:1464,33,0	1/1:1,0:1:3.01:110,3,0
chr10	49485924	.	A	AG	3945.30	PASS	AB=0.925;AC=41;AF=0.732;AN=56;BaseQRankSum=12.122;DP=406;FS=9.282;HRun=1;HaplotypeScore=212.7797;InbreedingCoeff=0.2238;MQ=92.59;MQ0=0;MQRankSum=-12.850;QD=12.52;ReadPosRankSum=10.489;VQSLOD=1.0385;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,114,1570	0/1:1,4:5:5.87:96,0,6	0/0:30,0:30:62.38:0,62,1025	0/0:22,0:22:58.01:0,58,714	1/1:18,0:18:5.29:180,5,0	1/1:15,0:15:0.97:105,1,0	0/1:19,0:19:34.33:150,0,34	1/1:0,11:11:33.07:371,33,0	1/1:20,0:20:23.35:207,23,0	0/1:19,0:19:79.88:80,0,105	1/1:10,0:10:24.42:107,24,0	1/1:13,0:13:9.62:118,10,0	1/1:12,0:12:6.03:106,6,0	1/1:11,0:11:10.29:91,10,0	1/1:1,20:22:56.96:531,57,0	0/1:10,0:10:35.25:66,0,35	0/1:21,2:23:57.21:239,0,57	1/1:10,0:10:5.68:83,6,0	1/1:0,6:6:18.04:186,18,0	1/1:0,13:13:36.04:349,36,0	1/1:1,5:6:12.02:118,12,0	1/1:12,0:12:2.66:153,3,0	1/1:13,0:13:15.76:107,16,0	0/1:11,0:11:25.71:29,0,26	1/1:12,0:12:20.71:133,21,0	0/1:13,0:13:52.41:89,0,52	1/1:2,9:11:27.03:252,27,0	0/0:1,0:1:2.22:0,2,7
chr10	49485929	.	A	AG	381.78	PASS	AB=0.889;AC=16;AF=0.286;AN=56;BaseQRankSum=7.412;DP=426;FS=4.893;HRun=0;HaplotypeScore=212.4159;InbreedingCoeff=0.5914;MQ=91.93;MQ0=0;MQRankSum=-6.459;QD=3.01;ReadPosRankSum=0.252;VQSLOD=3.1612;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,108,1510	0/1:1,4:5:1.80:19,0,2	0/0:29,0:29:66.37:0,66,1021	0/0:24,0:24:63.90:0,64,724	0/1:20,0:20:3.90:4,0,175	0/0:15,0:15:38.16:0,38,229	0/0:21,0:21:22.93:0,23,284	1/1:0,9:9:22.05:91,22,0	0/0:21,0:21:54.08:0,54,287	0/0:21,0:21:61.08:0,61,387	0/0:13,0:13:2.66:0,3,125	0/0:15,0:15:18.42:0,18,208	0/0:13,0:13:32.19:0,32,194	0/0:15,0:15:28.89:0,29,168	1/1:4,18:22:28.11:153,28,0	0/0:11,0:11:28.26:0,28,172	0/1:23,0:23:14.70:15,0,264	0/0:10,0:10:24.20:0,24,111	1/1:0,6:6:14.13:61,14,0	1/1:3,11:14:25.98:119,26,0	1/1:2,3:5:6.75:22,7,0	0/1:13,0:13:32.13:32,0,126	0/0:15,0:15:10.13:0,10,185	0/0:12,0:12:5.67:0,6,56	0/0:12,0:12:6.46:0,6,134	0/0:15,0:15:17.90:0,18,224	1/1:1,9:10:8.73:48,9,0	0/0:1,0:1:3:0,3,27
chr10	49485930	.	A	AAGCTGC	14218.02	PASS	AB=1.000;AC=49;AF=0.875;AN=56;BaseQRankSum=12.355;DP=465;FS=0.923;HRun=0;HaplotypeScore=219.8817;InbreedingCoeff=0.7798;MQ=87.66;MQ0=0;MQRankSum=-13.094;QD=37.61;ReadPosRankSum=4.490;VQSLOD=4.4300;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,108,2712	1/1:1,4:5:15.05:361,15,0	0/0:29,0:29:83.41:0,83,1734	0/0:22,0:22:39.91:0,40,1138	1/1:22,0:22:47.13:545,47,0	1/1:15,0:15:44.91:504,45,0	1/1:21,0:21:53.03:574,53,0	1/1:11,9:20:54.18:1307,54,0	1/1:21,0:21:62.58:753,63,0	1/1:21,0:21:41:483,41,0	1/1:13,0:13:32.97:396,33,0	1/1:15,0:15:44.76:497,45,0	1/1:13,0:13:35.25:390,35,0	1/1:15,0:15:44.52:451,45,0	1/1:6,18:24:69.17:1642,69,0	1/1:11,0:11:30.61:310,31,0	1/1:24,0:24:55.78:514,56,0	1/1:10,0:10:24.54:298,25,0	1/1:3,6:9:27.09:631,27,0	1/1:12,11:23:57.13:1332,57,0	1/1:7,3:10:15.05:396,15,0	1/1:13,0:13:34.26:344,34,0	1/1:18,0:18:44.22:512,44,0	1/1:12,0:12:15.44:160,15,0	1/1:12,0:12:32.31:355,32,0	0/1:15,0:15:41.30:363,0,41	1/1:6,9:15:45.15:1088,45,0	1/1:1,0:1:2.80:13,3,0
chr10	49486043	.	C	CT	11868.89	PASS	AB=0.567;AC=45;AF=0.804;AN=56;BaseQRankSum=-1.824;DP=589;FS=7.118;HRun=9;HaplotypeScore=83.9265;InbreedingCoeff=0.8801;MQ=81.87;MQ0=0;MQRankSum=-3.355;QD=24.99;ReadPosRankSum=0.445;VQSLOD=5.2725;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,3:38:17.12:0,17,610	0/0:13,0:13:32.98:0,33,286	0/0:20,0:20:35.95:0,36,306	0/0:17,0:17:35.99:0,36,312	1/1:3,23:26:60.97:637,61,0	1/1:3,17:20:48.13:531,48,0	1/1:2,13:15:13.06:372,13,0	1/1:13,32:45:96.70:1044,97,0	1/1:2,15:17:39.11:431,39,0	1/1:3,19:23:56.99:612,57,0	1/1:3,13:16:36.10:398,36,0	1/1:1,14:15:33.09:365,33,0	1/1:2,17:19:48.13:531,48,0	1/1:2,21:23:54.15:597,54,0	0/0:26,0:26:65.97:0,66,573	1/1:4,16:20:29.63:533,30,0	1/1:4,37:41:93.25:1029,93,0	1/1:0,19:19:42.11:464,42,0	1/1:5,23:28:69.14:739,69,0	1/1:4,11:16:32.89:333,33,0	1/1:2,9:11:27.07:299,27,0	1/1:3,18:21:28.09:538,28,0	1/1:2,10:12:30.08:332,30,0	0/1:4,13:17:10:356,0,10	1/1:2,21:23:54.15:597,54,0	1/1:3,12:15:13.02:361,13,0	1/1:4,21:25:34.11:604,34,0	1/1:0,8:8:15.04:166,15,0
chr10	49486417	.	T	TCACACA	3578.55	PASS	AB=1.000;AC=45;AF=0.938;AN=48;BaseQRankSum=-1.650;DP=454;FS=0.000;HRun=0;HaplotypeScore=130.5849;InbreedingCoeff=0.1515;MQ=72.51;MQ0=14;MQRankSum=-0.817;QD=10.37;ReadPosRankSum=0.650;VQSLOD=2.4767;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:27:0.88:0,1,2	1/1:6,0:6:6.02:145,6,0	./.	./.	1/1:10,0:10:6.02:113,6,0	1/1:13,0:13:6.02:134,6,0	1/1:26,0:26:11.35:137,11,0	1/1:27,0:23:8.06:82,8,0	1/1:18,0:18:9.50:173,9,0	1/1:10,0:10:11.16:171,11,0	1/1:12,0:12:8.10:138,8,0	1/1:10,0:10:2.90:72,3,0	1/1:13,0:13:12.04:210,12,0	1/1:5,0:5:3.01:45,3,0	1/1:15,0:15:3.01:42,3,0	1/1:4,0:4:3:29,3,0	1/1:27,0:27:27.33:445,27,0	1/1:11,7:20:9.03:193,9,0	1/1:22,0:20:24.08:482,24,0	1/1:12,0:12:3.01:69,3,0	1/1:22,0:20:12.04:263,12,0	./.	./.	0/1:17,0:17:0.08:0,0,0	1/1:11,0:11:3.01:89,3,0	1/1:21,0:19:12.88:201,13,0	1/1:18,0:18:12.33:232,12,0	1/1:6,0:6:6.01:113,6,0
chr10	49486463	.	A	ACACACC	5974.37	PASS	AB=1.000;AC=41;AF=0.732;AN=56;BaseQRankSum=1.084;DP=455;FS=7.421;HRun=0;HaplotypeScore=120.3946;InbreedingCoeff=0.4676;MQ=66.73;MQ0=10;MQRankSum=-1.396;QD=17.42;ReadPosRankSum=0.693;VQSLOD=3.6999;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:25:44.80:0,45,356	0/1:11,0:10:33.40:33,0,157	0/0:29,0:23:43.42:0,43,524	0/0:26,0:19:53.10:0,53,497	1/1:13,0:13:29.75:329,30,0	1/1:14,0:14:38.73:414,39,0	1/1:19,0:19:30.53:344,31,0	0/0:16,0:14:3.93:0,4,265	1/1:14,0:14:33.43:330,33,0	1/1:12,0:11:32.93:373,33,0	1/1:23,0:23:49.99:477,50,0	1/1:10,0:10:23.98:228,24,0	1/1:10,0:10:26.82:206,27,0	1/1:10,0:9:20.99:198,21,0	0/0:15,0:15:9.80:0,10,177	1/1:5,0:5:12.01:134,12,0	1/1:29,0:31:62.52:840,63,0	1/1:23,1:23:41.67:408,42,0	0/1:19,0:19:59.16:59,0,255	0/1:19,0:19:44.30:44,0,125	0/1:19,0:18:99:138,0,130	1/1:4,0:4:11.97:99,12,0	1/1:9,0:9:18.01:201,18,0	1/1:19,0:19:23.89:250,24,0	1/1:2,9:14:3.01:109,3,0	1/1:18,0:17:42.20:359,42,0	0/1:14,0:14:57.91:58,0,104	1/1:12,0:12:26.90:344,27,0
chr10	49486568	.	GAATA	G	3909.38	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=11.919;DP=403;FS=7.296;HRun=0;HaplotypeScore=66.0064;InbreedingCoeff=0.8910;MQ=58.84;MQ0=0;MQRankSum=-5.829;QD=33.99;ReadPosRankSum=-1.535;VQSLOD=2.4462;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:96.30:0,96,2409	1/1:0,5:5:12.04:213,12,0	0/1:9,0:9:1.88:2,0,356	0/0:9,0:8:9:0,9,170	0/0:18,0:18:48.16:0,48,1247	0/0:14,0:14:39.13:0,39,1012	0/0:7,0:7:15.05:0,15,390	1/1:6,17:22:51.14:820,51,0	0/0:7,0:7:12.04:0,12,312	0/0:20,0:20:51.18:0,51,1273	0/0:15,0:15:42.14:0,42,1090	0/0:13,0:13:33.10:0,33,778	0/0:10,0:10:27.08:0,27,647	0/0:8,0:8:24.08:0,24,624	1/1:2,10:12:30.10:539,30,0	0/0:9,0:9:27.09:0,27,699	0/0:22,0:22:60.21:0,60,1552	0/0:18,0:17:48.16:0,48,1232	1/1:6,10:16:30.08:505,30,0	1/1:2,15:17:39.13:701,39,0	1/1:2,6:8:9.03:162,9,0	0/0:3,0:3:6.02:0,6,156	0/0:14,0:14:36.11:0,36,857	0/0:15,0:15:42.13:0,42,1037	0/0:12,0:12:36.11:0,36,855	0/0:30,0:30:81.28:0,81,2082	1/1:2,23:25:54.19:967,54,0	0/0:12,0:12:36.12:0,36,935
chr10	49486882	.	ATATGT	A	6825.37	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=13.231;DP=472;FS=4.240;HRun=0;HaplotypeScore=88.0378;InbreedingCoeff=0.8864;MQ=74.94;MQ0=0;MQRankSum=-6.917;QD=50.19;ReadPosRankSum=-0.280;VQSLOD=4.8880;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:72.25:0,72,2109	1/1:0,7:7:15.05:326,15,0	0/1:11,0:11:31.26:31,0,796	0/0:8,0:8:19.31:0,19,528	0/0:27,0:27:81.28:0,81,2511	0/0:19,0:19:54.19:0,54,1670	0/0:20,0:20:57.18:0,57,1611	1/1:2,38:40:99:2300,114,0	0/0:10,0:10:30.08:0,30,811	0/0:25,0:25:72.25:0,72,2216	0/0:25,0:25:72.25:0,72,2255	0/0:12,0:12:36.12:0,36,1114	0/0:13,0:13:39.13:0,39,1237	0/0:8,0:8:21.07:0,21,666	1/1:1,11:12:27.09:586,27,0	0/0:16,0:16:45.15:0,45,1427	0/0:19,0:19:57.20:0,57,1686	0/0:19,0:19:57.11:0,57,1567	1/1:1,17:18:51.17:1107,51,0	1/1:1,17:18:45.15:977,45,0	1/1:0,12:12:33.11:717,33,0	0/0:8,0:8:24.08:0,24,711	0/0:13,0:13:36.12:0,36,1142	0/0:2,0:2:6.02:0,6,190	0/0:28,0:28:81.28:0,81,2494	0/0:24,0:24:69.24:0,69,2147	1/1:2,16:18:36.12:781,36,0	0/0:14,0:14:42.14:0,42,1332
chr10	49487125	.	GAC	G	1451.93	PASS	AB=0.959;AC=12;AF=0.214;AN=56;BaseQRankSum=3.687;DP=557;FS=1.657;HRun=0;HaplotypeScore=99.6190;InbreedingCoeff=0.6887;MQ=60.47;MQ0=7;MQRankSum=2.431;QD=10.76;ReadPosRankSum=2.091;VQSLOD=3.5617;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:41,1:42:28.46:28,0,1167	0/0:10,0:10:8.24:0,8,84	0/0:26,0:14:8.18:0,8,146	0/0:23,0:14:11.06:0,11,227	0/0:24,1:26:27.60:0,28,835	0/0:9,0:16:15:0,15,132	0/0:8,0:15:18:0,18,158	0/0:12,0:27:38.67:0,39,433	0/0:7,0:17:21:0,21,185	0/1:15,1:16:18.28:18,0,525	0/0:26,1:27:33.66:0,34,909	1/1:0,8:10:23.74:241,24,0	1/1:9,4:14:17.89:191,18,0	0/0:16,0:16:6.59:0,7,536	0/0:11,0:22:12:0,12,105	0/0:4,0:14:21:0,21,185	0/0:32,2:34:13.18:0,13,1078	0/0:7,0:7:4.74:0,5,180	0/0:13,0:18:33.22:0,33,273	0/0:8,0:18:26.48:0,26,207	0/0:16,0:25:23.73:0,24,205	1/1:4,13:17:39.12:462,39,0	1/1:7,9:15:24.07:284,24,0	1/1:6,13:19:35.94:405,36,0	0/0:28,1:30:12.02:0,12,882	0/0:27,2:29:10.87:0,11,847	0/0:6,0:15:26.68:0,27,210	0/0:5,0:5:15.05:0,15,237
chr10	49487617	.	GGTGT	G	7397.71	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=17.341;DP=703;FS=1.544;HRun=0;HaplotypeScore=136.0522;InbreedingCoeff=0.9864;MQ=82.75;MQ0=0;MQRankSum=-16.164;QD=43.77;ReadPosRankSum=-1.616;VQSLOD=5.1272;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,132,3439	1/1:2,5:7:15.05:276,15,0	0/0:21,0:21:51.17:0,51,1250	0/0:27,0:27:63.56:0,64,1671	0/0:36,0:36:99:0,105,2766	0/0:26,0:26:69.24:0,69,1822	0/0:28,0:28:72.23:0,72,1813	1/1:4,18:22:54.19:987,54,0	0/0:30,0:30:90.30:0,90,2291	0/0:35,0:35:93.32:0,93,2443	0/0:25,0:25:66.20:0,66,1669	0/0:22,0:22:63.20:0,63,1607	0/0:32,0:32:84.29:0,84,2209	0/0:17,0:17:48.15:0,48,1211	1/1:1,42:43:99:2168,120,0	0/0:24,0:24:66.23:0,66,1713	0/0:26,0:25:72.25:0,72,1832	0/0:14,0:14:36.10:0,36,894	1/1:3,17:20:51.17:938,51,0	1/1:3,28:31:78.18:1359,78,0	1/1:2,12:14:27.05:456,27,0	0/0:20,0:20:57.20:0,57,1454	0/0:19,0:19:57.20:0,57,1473	0/0:33,0:33:96.33:0,96,2534	0/0:23,0:23:63.21:0,63,1604	0/0:28,0:28:72.25:0,72,1869	1/1:6,26:32:66.23:1213,66,0	0/0:3,0:3:9.03:0,9,238
chr10	49488329	.	T	TC	3577.09	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=11.472;DP=549;FS=0.431;HRun=3;HaplotypeScore=85.0021;InbreedingCoeff=0.9769;MQ=82.81;MQ0=0;MQRankSum=-8.181;QD=29.81;ReadPosRankSum=-4.647;VQSLOD=1.4922;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,114,1368	1/1:1,7:8:21.07:294,21,0	0/0:20,0:20:6.33:0,6,533	0/0:25,0:25:46.85:0,47,724	0/0:15,0:15:36.11:0,36,432	0/0:27,0:27:75.23:0,75,898	0/0:23,0:23:60.16:0,60,706	1/1:9,21:30:72.20:980,72,0	0/0:30,0:30:84.24:0,84,995	0/0:18,0:17:36.10:0,36,422	0/0:11,0:11:33.10:0,33,393	0/0:17,0:17:48.15:0,48,576	0/0:14,0:14:39.11:0,39,455	0/0:21,0:21:60.18:0,60,719	1/1:2,10:12:30.10:419,30,0	0/0:10,0:10:30.09:0,30,360	0/0:37,0:37:99:0,108,1282	0/0:11,0:11:33.10:0,33,396	1/1:2,15:17:48.15:655,48,0	1/1:1,8:9:21.07:293,21,0	1/1:6,31:37:56.16:745,56,0	0/0:16,0:16:45.14:0,45,540	0/0:15,0:15:42.13:0,42,504	0/0:41,0:41:99:0,123,1474	0/0:8,0:8:21.06:0,21,252	0/0:17,0:17:51.16:0,51,612	1/1:2,5:7:15.89:190,16,0	0/0:10,0:10:24.07:0,24,284
chr10	49488354	.	CACCCATA	C	364.91	PASS	AB=0.872;AC=5;AF=0.089;AN=56;BaseQRankSum=5.541;DP=511;FS=1.057;HRun=0;HaplotypeScore=148.9947;InbreedingCoeff=-0.0985;MQ=74.46;MQ0=0;MQRankSum=-5.395;QD=5.79;ReadPosRankSum=-2.648;VQSLOD=2.1556;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,126,4628	0/1:6,1:7:65.09:65,0,153	0/0:19,0:19:50.97:0,51,1807	0/0:21,0:21:63.21:0,63,2105	0/0:15,0:15:42.14:0,42,1676	0/0:21,0:21:63.12:0,63,2075	0/0:26,0:26:78.23:0,78,3023	0/0:26,0:26:17.29:0,17,1417	0/0:25,0:25:75.26:0,75,2936	0/0:14,0:14:42.06:0,42,1542	0/0:12,0:12:33.11:0,33,1366	0/0:20,0:19:54.64:0,55,1984	0/0:15,0:15:45.14:0,45,1587	0/0:14,0:14:39.13:0,39,1523	0/1:9,1:10:72.49:72,0,411	0/0:17,0:17:51.17:0,51,2004	0/0:39,0:39:99:0,117,4585	0/0:11,0:11:33.11:0,33,1316	0/0:11,0:11:33.11:0,33,990	0/1:9,1:10:82.31:82,0,301	0/1:28,1:29:46.25:46,0,717	0/0:16,0:16:48.16:0,48,1911	0/0:11,0:11:33.03:0,33,1162	0/0:31,0:31:90.24:0,90,3339	0/0:11,0:11:33.11:0,33,1373	0/0:18,0:17:54.18:0,54,2065	0/1:4,3:7:99:217,0,262	0/0:11,0:11:30.09:0,30,995
chr10	49488355	.	A	AC	2233.62	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=7.730;DP=507;FS=1.740;HRun=3;HaplotypeScore=83.0225;InbreedingCoeff=0.9345;MQ=75.42;MQ0=0;MQRankSum=-8.635;QD=23.03;ReadPosRankSum=-1.888;VQSLOD=2.6257;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,114,1354	1/1:2,4:6:6.91:86,7,0	0/0:20,0:20:48.14:0,48,559	0/0:21,0:21:57.17:0,57,681	0/0:15,0:15:42.13:0,42,502	0/0:20,0:20:51.16:0,51,611	0/0:26,0:26:72.22:0,72,864	1/1:8,19:26:54.73:749,55,0	0/0:25,0:25:72.22:0,72,863	0/0:14,0:14:39.12:0,39,468	0/0:12,0:12:33.10:0,33,396	0/0:20,0:19:52.03:0,52,603	0/0:15,0:15:39.12:0,39,467	0/0:13,0:13:39.10:0,39,455	1/1:3,6:9:16.37:270,16,0	0/0:18,0:18:48.15:0,48,576	0/0:39,0:39:99:0,114,1367	0/0:12,0:12:33.10:0,33,396	1/1:0,11:11:33.11:461,33,0	1/1:4,5:9:8.32:167,8,0	1/1:11,17:28:29.34:531,29,0	0/0:16,0:16:48.15:0,48,575	0/0:11,0:11:27.08:0,27,324	0/0:30,0:30:81.25:0,81,971	0/0:11,0:11:33.10:0,33,396	0/0:19,0:18:51.16:0,51,611	1/1:4,3:7:2.93:154,3,0	0/0:10,0:10:27.08:0,27,323
chr10	49488431	.	TCATACACACACCC	T	704.31	PASS	AB=0.900;AC=10;AF=0.294;AN=34;BaseQRankSum=1.391;DP=427;FS=6.918;HRun=0;HaplotypeScore=165.0941;InbreedingCoeff=0.6072;MQ=73.03;MQ0=4;MQRankSum=1.215;QD=7.34;ReadPosRankSum=1.449;VQSLOD=2.1683;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:27.09:0,27,893	./.	./.	./.	0/1:12,0:12:0:0,0,0	0/0:14,0:14:9.03:0,9,416	0/0:22,0:22:15.05:0,15,435	./.	0/0:12,0:12:9.03:0,9,349	0/1:12,4:16:7.99:87,0,8	0/0:13,4:17:0.89:0,1,2	0/0:17,0:16:28.32:0,28,987	0/0:8,0:8:15.05:0,15,575	1/1:9,0:9:3.01:83,3,0	./.	0/0:14,0:13:9.02:0,9,325	1/1:28,0:28:15.01:444,15,0	./.	./.	./.	1/1:16,0:16:0.47:1,0,0	0/0:16,0:16:9.03:0,9,454	0/0:14,0:14:27.09:0,27,1152	0/0:21,0:21:20.78:0,21,649	1/1:15,0:15:12.04:206,12,0	./.	./.	./.
chr10	49488462	.	CACACA	C	266.20	PASS	AB=0.833;AC=5;AF=0.093;AN=54;BaseQRankSum=4.946;DP=354;FS=0.000;HRun=0;HaplotypeScore=80.2103;InbreedingCoeff=0.5004;MQ=47.68;MQ0=43;MQRankSum=-1.276;QD=19.01;ReadPosRankSum=-0.485;VQSLOD=2.6247;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:75.25:0,75,2086	./.	0/0:34,0:6:15.05:0,15,309	0/0:43,0:13:36.03:0,36,584	0/0:9,0:8:17.99:0,18,458	0/0:11,0:11:31.35:0,31,908	0/0:21,0:21:60.19:0,60,1704	0/0:5,0:4:11.99:0,12,172	0/0:12,0:12:36.12:0,36,974	0/0:11,0:10:27.08:0,27,518	0/0:11,0:10:18.06:0,18,506	0/0:13,0:11:27.09:0,27,871	0/0:9,0:9:24.08:0,24,777	0/0:9,0:9:22:0,22,629	1/1:5,3:8:9.50:193,10,0	0/0:5,0:4:12.04:0,12,339	0/0:20,0:20:5.15:0,5,998	0/0:4,0:4:12.04:0,12,359	1/1:1,0:1:2.97:20,3,0	0/0:6,1:6:3.01:0,3,31	0/0:4,0:3:1.41:0,1,3	0/0:18,0:17:48.16:0,48,1436	0/0:17,0:17:51.16:0,51,1537	0/0:23,0:23:58.14:0,58,1660	0/0:13,0:13:33.11:0,33,737	0/0:11,0:11:33.11:0,33,987	0/1:4,0:5:58.76:163,0,59	0/0:2,0:2:6.02:0,6,174
chr10	49490008	.	CACACACACACA	C	1569.81	PASS	AB=0.873;AC=10;AF=0.179;AN=56;BaseQRankSum=9.058;DP=602;FS=2.736;HRun=0;HaplotypeScore=207.2250;InbreedingCoeff=-0.1283;MQ=56.99;MQ0=24;MQRankSum=-7.127;QD=10.00;ReadPosRankSum=1.135;VQSLOD=2.5792;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:39:58.11:0,58,1151	0/1:9,0:9:30.49:30,0,116	0/0:20,0:6:18.04:0,18,203	0/0:42,0:15:36.76:0,37,436	0/1:14,1:15:78.27:137,0,78	0/0:29,0:29:46.42:0,46,1219	0/0:22,0:22:40.70:0,41,777	0/0:24,0:23:65.10:0,65,701	0/0:18,0:18:47.23:0,47,963	0/1:20,4:24:99:412,0,221	0/1:8,4:12:35.72:95,0,36	0/0:22,0:22:51.64:0,52,1686	0/0:17,0:16:34.74:0,35,781	0/1:15,5:20:68.51:233,0,69	0/1:27,0:26:93.14:93,0,554	0/0:27,0:27:72.98:0,73,1817	0/1:18,3:21:99:322,0,113	0/0:13,0:12:10.12:0,10,110	0/0:18,0:18:44.46:0,44,719	0/0:20,0:20:50.01:0,50,1385	0/0:41,0:39:78.17:0,78,1378	0/0:27,0:26:59.23:0,59,1522	0/0:15,0:15:41.29:0,41,1306	0/0:35,0:35:85.10:0,85,2207	0/1:9,4:12:42.94:211,0,43	0/1:10,1:11:74.69:75,0,113	0/0:15,0:15:38.71:0,39,1098	0/1:4,1:5:0.98:107,0,1
chr10	49490375	.	G	GGGGAGAGA	2507.79	PASS	AB=0.807;AC=18;AF=0.321;AN=56;BaseQRankSum=2.028;DP=566;FS=4.047;HRun=0;HaplotypeScore=144.0931;InbreedingCoeff=-0.0092;MQ=70.39;MQ0=18;MQRankSum=-0.978;QD=7.84;ReadPosRankSum=-5.805;VQSLOD=-0.2069;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:21:44.11:0,44,570	0/0:6,0:5:14.89:0,15,175	0/0:42,0:24:36.33:0,36,397	0/0:42,0:19:26.13:0,26,257	0/1:16,0:16:32.45:32,0,153	1/1:18,0:19:41.42:467,41,0	1/1:21,0:23:46.40:541,46,0	0/1:32,0:32:99:175,0,357	1/1:5,22:29:8.82:403,9,0	0/1:14,0:29:99:412,0,179	0/0:13,0:14:11.14:0,11,149	0/0:7,0:13:32.92:0,33,315	0/0:15,0:16:39.37:0,39,318	0/1:10,0:17:21.28:21,0,192	0/0:17,0:17:44.86:0,45,629	0/1:7,0:15:74.98:75,0,92	0/1:10,0:22:1.48:1,0,220	0/1:5,0:9:20.32:20,0,82	0/1:28,0:25:99:214,0,230	0/1:14,0:13:15.95:16,0,186	0/1:10,0:15:52.55:53,0,164	0/0:14,0:15:26.93:0,27,220	0/0:15,0:15:2.08:0,2,138	0/0:9,0:13:29.86:0,30,252	0/0:17,0:20:35.96:0,36,302	0/1:25,0:24:65.40:65,0,365	0/1:9,0:22:99:183,0,159	0/0:8,0:7:5.30:0,5,93
chr10	49490609	.	G	GAAACAAAACA	4116.74	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=2.053;DP=685;FS=6.633;HRun=0;HaplotypeScore=186.1607;InbreedingCoeff=0.9044;MQ=64.85;MQ0=4;MQRankSum=-6.196;QD=29.83;ReadPosRankSum=-1.247;VQSLOD=2.5133;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:69.18:0,69,1789	1/1:3,5:11:9.03:443,9,0	0/0:29,0:22:11.64:0,12,111	0/0:45,0:32:1.02:0,1,118	0/0:23,0:23:51.15:0,51,1360	1/1:8,0:22:30.07:308,30,0	1/1:11,0:19:12.76:141,13,0	0/0:21,0:21:12.03:0,12,186	1/1:10,0:25:21.05:227,21,0	0/0:27,0:27:54.09:0,54,1351	0/0:17,0:17:14.98:0,15,277	0/0:14,0:14:24.08:0,24,656	0/0:21,0:21:39.13:0,39,1036	0/0:22,0:22:39.04:0,39,961	1/1:13,18:33:48.16:2368,48,0	1/1:10,0:28:15.05:630,15,0	0/0:23,0:23:48.05:0,48,1140	0/0:13,0:13:18.99:0,19,518	0/0:13,0:12:9.03:0,9,268	0/0:28,0:28:51.06:0,51,1167	0/0:24,0:24:48.09:0,48,1188	0/0:18,0:18:24.08:0,24,666	0/0:24,0:24:42.04:0,42,995	0/0:44,0:44:84.25:0,84,2219	0/0:15,0:15:27.09:0,27,687	0/0:34,0:34:45.14:0,45,1191	0/0:25,0:25:48.09:0,48,1227	0/0:15,0:15:39.11:0,39,1082
chr10	49491444	.	ATCTACAAACTTCATCC	A	6305.06	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=10.741;DP=649;FS=0.564;HRun=0;HaplotypeScore=292.7124;InbreedingCoeff=0.9964;MQ=91.29;MQ0=0;MQRankSum=-11.155;QD=121.25;ReadPosRankSum=3.132;VQSLOD=4.0785;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:47:99:0,144,10580	0/0:6,0:6:18.06:0,18,1398	0/0:33,0:33:99:0,99,6168	0/0:21,0:21:59.53:0,60,3221	0/0:18,0:18:51.18:0,51,4066	1/1:0,17:17:45.10:2052,45,0	1/1:0,16:16:39.13:1761,39,0	0/0:25,0:25:75.26:0,75,5072	1/1:0,19:19:51.18:2492,51,0	0/0:23,0:23:66.23:0,66,5186	0/0:19,0:19:57.20:0,57,4110	0/0:26,0:26:78.27:0,78,5885	0/0:21,0:21:60.21:0,60,4535	0/0:22,0:22:66.23:0,66,5123	0/0:17,0:17:51.18:0,51,3945	0/0:18,0:18:54.19:0,54,3569	0/0:27,0:27:81.28:0,81,5656	0/0:14,0:14:42.14:0,42,3251	0/0:18,0:18:54.19:0,54,3448	0/0:26,0:26:78.27:0,78,5754	0/0:48,0:48:99:0,144,10566	0/0:26,0:26:78.27:0,78,6089	0/0:28,0:28:84.29:0,84,6587	0/0:31,0:31:90.31:0,90,6989	0/0:23,0:23:69.24:0,69,5404	0/0:24,0:24:72.25:0,72,5540	0/0:27,0:27:81.28:0,81,5881	0/0:8,0:8:24.08:0,24,1223
chr10	49491855	.	TGGG	T	894.05	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=9.210;DP=684;FS=2.367;HRun=3;HaplotypeScore=102.5269;InbreedingCoeff=0.9945;MQ=88.74;MQ0=0;MQRankSum=-8.926;QD=28.84;ReadPosRankSum=2.592;VQSLOD=1.4579;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:56:99:0,169,4026	0/0:12,0:12:36.12:0,36,873	0/0:28,0:28:84.29:0,84,1953	0/0:23,0:23:63:0,63,1409	0/0:25,0:25:72.25:0,72,1745	0/0:22,0:22:66.23:0,66,1605	0/0:20,0:20:60.19:0,60,1411	0/0:30,0:30:87.30:0,87,2089	0/0:29,0:29:87.30:0,87,2114	0/0:30,0:30:87.30:0,87,2116	0/0:19,0:19:57.20:0,57,1391	0/0:20,0:20:60.19:0,60,1411	0/0:21,0:21:63.22:0,63,1532	0/0:25,0:25:75.26:0,75,1823	0/0:26,0:26:78.27:0,78,1895	1/1:2,29:31:20.30:986,20,0	0/0:28,0:28:84.26:0,84,1945	0/0:17,0:17:51.18:0,51,1238	0/0:29,0:29:87.30:0,87,2083	0/0:21,0:21:63.22:0,63,1526	0/0:39,0:39:99:0,117,2757	0/0:19,0:19:57.20:0,57,1358	0/0:16,0:16:48.16:0,48,1166	0/0:14,0:14:42.14:0,42,998	0/0:23,0:23:69.24:0,69,1677	0/0:27,0:27:81.28:0,81,1948	0/0:24,0:24:72.25:0,72,1751	0/0:10,0:10:30.10:0,30,728
chr10	49491859	.	TTGCG	T	1068.46	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=9.349;DP=699;FS=3.340;HRun=0;HaplotypeScore=118.2636;InbreedingCoeff=0.8934;MQ=88.67;MQ0=0;MQRankSum=-8.273;QD=34.47;ReadPosRankSum=2.521;VQSLOD=3.5833;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:60,0:60:99:0,178,4754	0/0:11,0:11:33.11:0,33,955	0/0:29,0:29:87.26:0,87,2028	0/0:23,0:23:59.38:0,59,1703	0/0:26,0:26:75.21:0,75,1908	0/0:22,0:22:66.23:0,66,1911	0/0:20,0:20:60.17:0,60,1529	0/0:28,0:28:81.25:0,81,2104	0/0:30,0:30:90.29:0,90,2482	0/0:30,0:30:90.31:0,90,2544	0/0:21,0:21:63.20:0,63,1722	0/0:22,0:22:66.23:0,66,1851	0/0:21,0:21:63.22:0,63,1811	0/0:26,0:26:78.25:0,78,2054	0/0:27,0:27:81.22:0,81,2215	1/1:2,29:31:6.42:1149,6,0	0/0:27,0:27:81.26:0,81,2252	0/0:17,0:17:51.13:0,51,1410	0/0:29,0:29:87.30:0,87,2463	0/0:21,0:21:63.19:0,63,1699	0/0:39,0:39:99:0,117,3249	0/0:21,0:21:63.19:0,63,1569	0/0:18,0:18:51.15:0,51,1319	0/0:14,0:14:42.13:0,42,1118	0/0:24,0:24:72.25:0,72,1954	0/0:28,0:28:84.27:0,84,2180	0/0:24,0:24:72.25:0,72,2082	0/0:10,0:10:30.10:0,30,869
chr10	49492316	.	CG	C	16803.41	PASS	AB=0.909;AC=45;AF=0.804;AN=56;BaseQRankSum=12.597;DP=615;FS=5.864;HRun=1;HaplotypeScore=114.6122;InbreedingCoeff=0.8873;MQ=75.61;MQ0=0;MQRankSum=-2.027;QD=33.95;ReadPosRankSum=1.092;VQSLOD=4.3109;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,132,2108	1/1:0,7:7:21.07:269,21,0	0/0:11,0:11:27.04:0,27,372	0/1:9,1:10:16.87:17,0,218	1/1:2,33:35:94.68:1211,95,0	0/0:19,0:19:51.17:0,51,686	0/0:22,0:22:66.22:0,66,895	1/1:0,24:24:72.15:874,72,0	0/0:24,0:24:72.18:0,72,945	1/1:1,19:20:60.14:752,60,0	1/1:1,26:27:76.20:876,76,0	1/1:0,21:21:60.19:765,60,0	1/1:0,21:21:54.04:687,54,0	1/1:0,24:24:60.19:760,60,0	1/1:0,29:29:75.24:960,75,0	1/1:1,15:16:48.15:612,48,0	1/1:0,29:29:81.26:1035,81,0	1/1:0,16:16:48.15:617,48,0	1/1:1,13:14:39.99:493,40,0	1/1:2,25:27:77.34:950,77,0	1/1:0,28:28:75.24:969,75,0	1/1:1,24:25:71.90:916,72,0	1/1:0,14:14:30.10:380,30,0	1/1:1,26:27:71.04:884,71,0	1/1:1,17:18:47.34:617,47,0	1/1:1,27:28:79.59:1009,80,0	1/1:0,26:26:69.22:881,69,0	1/1:0,9:9:21.07:273,21,0
chr10	49493090	.	AAGCC	A	5675.86	PASS	AB=0.515;AC=9;AF=0.161;AN=56;BaseQRankSum=14.870;DP=813;FS=0.802;HRun=0;HaplotypeScore=183.7673;InbreedingCoeff=0.8818;MQ=82.73;MQ0=0;MQRankSum=-2.962;QD=39.42;ReadPosRankSum=6.861;VQSLOD=4.9275;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,123,3161	0/0:16,0:16:48.16:0,48,1294	0/0:39,0:39:99:0,111,2819	0/0:29,0:29:75.22:0,75,1833	0/0:20,0:20:57.20:0,57,1456	0/0:21,0:21:60.21:0,60,1576	0/0:30,0:30:87.30:0,87,2347	0/0:31,0:31:75.18:0,75,1920	0/0:25,0:25:75.26:0,75,2015	0/0:41,0:41:99:0,123,3236	0/0:28,0:27:78.25:0,78,1951	1/1:3,24:27:57.19:1060,57,0	1/1:1,28:29:72.25:1366,72,0	0/0:38,0:38:99:0,114,2886	0/0:40,0:40:99:0,117,3069	0/0:20,0:20:54.14:0,54,1395	0/0:35,0:35:99:0,105,2607	0/0:20,0:20:57.20:0,57,1539	0/0:24,0:24:69.24:0,69,1847	0/0:27,0:27:75.26:0,75,1921	0/0:34,0:34:99:0,99,2592	1/1:1,29:30:57.18:1082,57,0	1/1:2,21:23:51.17:968,51,0	0/1:2,33:35:9.57:1200,0,10	0/0:24,0:24:69.24:0,69,1756	0/0:39,0:39:99:0,108,2843	0/0:32,0:32:87.30:0,87,2309	0/0:11,0:11:33.11:0,33,888
chr10	49493504	.	TC	T	997.75	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.179;DP=725;FS=4.558;HRun=2;HaplotypeScore=80.5918;InbreedingCoeff=0.9918;MQ=91.77;MQ0=0;MQRankSum=-3.127;QD=30.23;ReadPosRankSum=1.134;VQSLOD=3.2269;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,141,2055	1/1:0,5:5:15.05:188,15,0	0/0:29,0:29:87.26:0,87,1184	0/0:29,0:30:62.84:0,63,1161	0/0:23,0:23:69.22:0,69,1009	0/0:27,0:27:81.26:0,81,1185	0/0:29,0:29:87.28:0,87,1284	0/0:34,0:34:87.29:0,87,1294	0/0:31,0:31:90.30:0,90,1336	0/0:23,0:23:63.21:0,63,917	0/0:25,0:25:75.24:0,75,1098	0/0:25,0:25:75.25:0,75,1120	0/0:27,0:27:78.26:0,78,1158	0/0:23,0:23:69.23:0,69,1032	1/1:0,28:28:72.23:928,72,0	0/0:25,0:25:72.23:0,72,1059	0/0:23,0:23:69.22:0,69,1015	0/0:25,0:25:75.25:0,75,1113	0/0:17,0:17:51.17:0,51,752	0/0:24,0:24:69.23:0,69,1031	0/0:28,0:28:81.06:0,81,1174	0/0:19,0:19:57.19:0,57,847	0/0:24,0:24:69.23:0,69,1032	0/0:34,0:34:99:0,102,1471	0/0:22,0:22:63.19:0,63,904	0/0:38,0:38:99:0,111,1586	0/0:22,0:22:63.21:0,63,941	0/0:16,0:16:48.16:0,48,717
chr10	49494385	.	TTGTATG	T	22504.22	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=8.920;DP=620;FS=8.587;HRun=0;HaplotypeScore=153.3161;InbreedingCoeff=0.9759;MQ=63.74;MQ0=0;MQRankSum=-13.241;QD=43.03;ReadPosRankSum=3.345;VQSLOD=4.5720;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,120,3950	1/1:1,8:9:21.07:468,21,0	0/0:24,0:24:54.19:0,54,1707	0/0:27,0:27:71.88:0,72,2241	1/1:6,25:31:56.98:1036,57,0	1/1:4,21:25:51.18:1138,51,0	1/1:6,25:31:66.23:1472,66,0	1/1:11,25:36:75.23:1478,75,0	1/1:3,18:21:39.13:870,39,0	1/1:6,24:30:69:1507,69,0	1/1:2,20:22:39.04:734,39,0	1/1:3,19:22:45.15:1004,45,0	1/1:3,20:23:48.16:1071,48,0	1/1:3,6:9:18.06:402,18,0	1/1:3,20:23:51.18:1138,51,0	1/1:6,12:18:33.11:736,33,0	1/1:4,11:15:27.09:593,27,0	1/1:3,8:11:21.07:469,21,0	1/1:2,15:17:45.14:946,45,0	1/1:3,21:24:48.12:1024,48,0	1/1:6,8:14:12.04:268,12,0	1/1:4,17:21:36.04:709,36,0	1/1:1,21:22:51.13:1090,51,0	1/1:7,13:20:20.86:414,21,0	1/1:5,17:22:39.13:870,39,0	1/1:2,20:22:60.21:1259,60,0	1/1:4,24:27:66.23:1473,66,0	1/1:2,5:7:15.05:335,15,0
chr10	49496119	.	TTGTGTG	T	4857.82	PASS	AB=0.893;AC=30;AF=0.556;AN=54;BaseQRankSum=3.888;DP=692;FS=0.000;HRun=0;HaplotypeScore=177.2965;InbreedingCoeff=0.7691;MQ=58.96;MQ0=19;MQRankSum=-7.609;QD=13.24;ReadPosRankSum=2.119;VQSLOD=4.0358;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:33:0.59:1,0,62	1/1:3,11:14:30.10:615,30,0	0/0:38,0:17:6.02:0,6,112	./.	1/1:20,0:20:17.95:224,18,0	1/1:11,10:23:27.98:530,28,0	1/1:16,8:25:6.02:123,6,0	0/0:34,0:32:26.90:0,27,380	1/1:17,16:34:33.11:657,33,0	1/1:27,0:27:17.73:220,18,0	1/1:16,0:16:8.28:67,8,0	0/0:8,0:21:21.44:0,21,302	0/0:13,0:22:29.83:0,30,388	1/1:17,0:17:21.06:280,21,0	1/1:17,19:36:48.12:910,48,0	1/1:7,0:25:36.10:484,36,0	1/1:16,0:16:9.03:126,9,0	1/1:15,0:15:9.02:115,9,0	0/0:18,0:17:11.06:0,11,207	0/0:11,0:21:8.88:0,9,60	0/0:29,0:29:6.02:0,6,107	0/0:12,0:23:35.27:0,35,418	0/0:8,1:21:16.84:0,17,229	0/0:14,0:29:33.11:0,33,424	1/1:28,0:27:26.98:312,27,0	0/1:33,0:33:26.53:175,0,27	0/0:19,0:27:18.06:0,18,387	1/1:5,0:5:2.96:19,3,0
chr10	49496145	.	GTGTGTGTGTGTGTA	G	3148.54	PASS	AB=0.974;AC=15;AF=0.268;AN=56;BaseQRankSum=6.436;DP=701;FS=1.554;HRun=0;HaplotypeScore=254.0293;InbreedingCoeff=-0.0122;MQ=48.99;MQ0=34;MQRankSum=-5.142;QD=12.25;ReadPosRankSum=2.221;VQSLOD=2.3107;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:41.66:0,42,1352	0/0:16,0:16:36.12:0,36,907	0/0:49,0:10:26.79:0,27,532	0/0:71,0:18:44.11:0,44,725	0/1:21,1:22:9.19:411,0,9	0/0:20,0:20:48.13:0,48,1104	0/0:23,0:23:36.02:0,36,590	0/1:25,0:23:45.79:46,0,1167	0/0:26,0:26:41.97:0,42,889	0/1:22,0:22:64.75:423,0,65	0/1:20,0:20:40.01:126,0,40	0/0:29,0:28:57.16:0,57,2237	0/0:24,0:24:44.65:0,45,1946	1/1:14,2:16:21.07:576,21,0	0/0:39,0:39:69.23:0,69,1678	0/1:26,0:26:60.07:60,0,105	0/1:11,2:13:92.25:304,0,92	0/1:12,1:11:91.85:258,0,92	0/1:16,0:14:24.87:25,0,529	0/0:19,0:17:11.89:0,12,109	0/1:26,0:26:46.41:46,0,252	0/0:24,0:24:60.19:0,60,2545	0/0:22,0:22:36.08:0,36,1467	0/0:31,0:31:52.51:0,53,2851	0/1:27,1:27:13.22:568,0,13	0/1:27,0:27:99:409,0,236	0/0:20,0:19:27.09:0,27,1033	1/1:3,0:3:5.97:63,6,0
chr10	49496147	.	GTGTGTGTGTGTA	G	5539.07	PASS	AB=0.918;AC=19;AF=0.339;AN=56;BaseQRankSum=1.908;DP=686;FS=0.435;HRun=0;HaplotypeScore=225.8645;InbreedingCoeff=0.4149;MQ=50.90;MQ0=34;MQRankSum=-3.500;QD=22.79;ReadPosRankSum=1.393;VQSLOD=3.5342;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:41.90:0,42,1043	0/0:16,0:16:36.12:0,36,594	0/0:54,0:15:37.87:0,38,587	0/0:70,0:17:44.10:0,44,619	1/1:3,18:21:21.07:668,21,0	0/0:20,0:20:44.17:0,44,777	0/0:21,0:21:33.03:0,33,465	0/1:24,0:22:71.57:72,0,900	0/0:25,0:25:40.97:0,41,522	1/1:3,19:22:44.81:873,45,0	1/1:4,16:20:12.04:315,12,0	0/0:28,0:27:54.16:0,54,1784	0/0:24,0:24:44.94:0,45,1642	1/1:6,9:15:21.07:738,21,0	0/0:39,0:39:65.24:0,65,1047	0/1:24,0:24:33.50:364,0,33	0/1:11,1:12:26.92:308,0,27	0/1:12,1:11:15.20:358,0,15	0/1:15,0:13:68.88:69,0,270	0/0:21,0:19:11.89:0,12,97	0/1:24,0:24:49.74:50,0,198	0/0:23,0:23:60.19:0,60,2090	0/0:23,0:23:36.02:0,36,1209	0/0:30,0:30:52.48:0,52,2270	1/1:5,21:26:27.09:934,27,0	0/1:6,18:24:56.77:682,0,57	0/0:19,0:18:27.09:0,27,879	1/1:3,0:3:5.97:109,6,0
chr10	49496659	.	ATCTC	A	80.46	PASS	AC=6;AF=0.111;AN=54;BaseQRankSum=-0.215;DP=455;FS=0.000;HRun=0;HaplotypeScore=131.1309;InbreedingCoeff=0.6397;MQ=64.21;MQ0=12;MQRankSum=0.614;QD=1.87;ReadPosRankSum=-1.012;VQSLOD=2.2421;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:42.14:0,42,713	0/0:11,0:11:11.52:0,12,147	0/0:29,0:17:41.51:0,42,846	0/0:30,0:17:48.16:0,48,966	0/0:16,0:16:3.44:0,3,26	1/1:1,13:14:3.01:56,3,0	1/1:2,14:17:2.71:21,3,0	0/0:23,0:23:63.19:0,63,1014	1/1:2,1:12:14.92:118,15,0	0/0:14,0:12:36.11:0,36,548	0/0:14,0:14:6.02:0,6,87	0/0:15,0:15:8.81:0,9,84	0/0:13,0:13:15.02:0,15,174	./.	0/0:20,0:20:38.34:0,38,495	0/0:23,0:23:29.56:0,30,485	0/0:5,0:14:12:0,12,149	0/0:4,0:4:9.03:0,9,122	0/0:22,0:22:57.18:0,57,989	0/0:12,0:13:30.07:0,30,529	0/0:13,0:13:27.09:0,27,545	0/0:11,0:11:12.02:0,12,153	0/0:15,0:15:5.95:0,6,68	0/0:12,0:18:0.21:0,0,0	0/0:16,0:17:17.52:0,18,213	0/0:11,0:18:45.15:0,45,698	0/0:18,0:18:35.90:0,36,648	0/0:7,0:7:9.03:0,9,145
chr10	49496666	.	TCACACACACACACACACACACACACA	T	1113.88	PASS	AC=6;AF=0.111;AN=54;BaseQRankSum=2.121;DP=528;FS=6.183;HRun=0;HaplotypeScore=269.0927;InbreedingCoeff=0.4697;MQ=55.28;MQ0=17;MQRankSum=-3.023;QD=20.25;ReadPosRankSum=0.451;VQSLOD=1.6571;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:26:27.05:0,27,1055	1/1:4,7:11:3.01:203,3,0	0/0:25,0:13:15.05:0,15,259	0/0:29,0:16:9.02:0,9,114	0/0:9,0:21:2.71:0,3,333	0/0:18,0:18:12.04:0,12,1339	0/0:20,0:20:3.01:0,3,317	0/0:23,0:23:45.11:0,45,1668	0/0:16,0:16:20.10:0,20,1956	0/0:19,0:16:39.05:0,39,2567	0/0:16,0:16:3:0,3,46	0/0:16,0:16:3.01:0,3,54	0/0:14,0:13:9.03:0,9,954	0/0:17,0:17:0.05:0,0,330	1/1:10,12:21:15.05:1013,15,0	0/0:25,0:24:20.92:0,21,916	0/0:16,0:16:16.60:0,17,710	0/0:8,0:8:18.02:0,18,1129	0/0:26,0:26:47.78:0,48,3124	0/0:14,0:14:24.07:0,24,1372	0/0:19,0:19:27.09:0,27,2176	0/0:13,0:13:2.95:0,3,341	./.	0/0:25,0:25:8.32:0,8,965	1/1:20,0:22:0.85:2,1,0	0/0:19,0:17:29.78:0,30,1780	0/0:17,0:16:18.04:0,18,1308	0/0:8,0:8:15:0,15,908
chr10	49496704	.	A	ACACACACT	1506.82	PASS	AB=0.895;AC=10;AF=0.179;AN=56;BaseQRankSum=0.184;DP=604;FS=8.564;HRun=0;HaplotypeScore=184.4911;InbreedingCoeff=0.4566;MQ=50.68;MQ0=22;MQRankSum=-1.541;QD=9.91;ReadPosRankSum=0.709;VQSLOD=2.1303;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:26:19.23:0,19,226	0/0:12,0:12:17.79:0,18,164	0/0:36,0:16:41.19:0,41,452	0/0:36,0:16:34.86:0,35,375	0/0:18,0:17:20.05:0,20,101	0/0:26,0:25:41.06:0,41,371	0/0:27,0:27:38.94:0,39,350	1/1:30,0:29:40.79:476,41,0	0/0:19,0:19:38.83:0,39,474	0/0:30,0:27:7.62:0,8,187	0/0:14,0:14:8.52:0,9,41	0/0:10,0:9:8.99:0,9,75	0/0:11,0:10:8.93:0,9,137	0/1:16,0:16:19.12:19,0,42	0/0:18,0:17:17.99:0,18,301	0/0:25,0:24:27.03:0,27,291	0/0:25,0:25:45.67:0,46,300	0/0:12,0:12:20.83:0,21,132	1/1:24,0:23:14.23:424,14,0	0/1:17,0:18:18.49:253,0,18	1/1:28,0:26:23.76:370,24,0	0/0:13,0:12:4.12:0,4,124	0/0:17,0:16:17.93:0,18,141	0/0:35,0:35:15.77:0,16,290	0/0:22,0:22:14.37:0,14,90	0/0:19,0:17:16.69:0,17,190	0/1:11,12:25:54.11:117,0,54	0/1:10,0:10:4.23:4,0,72
chr10	49497509	.	CTT	C	15131.46	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=8.351;DP=478;FS=6.901;HRun=2;HaplotypeScore=133.1122;InbreedingCoeff=0.9524;MQ=68.49;MQ0=0;MQRankSum=-4.450;QD=35.27;ReadPosRankSum=2.002;VQSLOD=4.6642;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:84.29:0,84,1693	1/1:0,9:9:27.05:297,27,0	0/0:12,0:12:33.11:0,33,603	0/0:9,0:9:7.44:0,7,254	1/1:0,28:32:78.19:940,78,0	1/1:1,14:15:45.12:567,45,0	1/1:0,4:4:12.02:135,12,0	1/1:1,26:27:81.21:967,81,0	1/1:1,12:13:39.07:448,39,0	1/1:0,38:38:99:1513,114,0	1/1:0,23:23:66.17:808,66,0	1/1:2,9:11:33.06:382,33,0	1/1:0,15:15:42.09:493,42,0	1/1:0,11:11:33.06:378,33,0	1/1:2,16:18:54.12:648,54,0	1/1:1,11:12:36.08:419,36,0	1/1:1,11:12:27.07:330,27,0	1/1:0,5:5:15.04:190,15,0	1/1:0,11:11:33.07:426,33,0	1/1:0,21:21:63.17:786,63,0	1/1:0,14:14:37.76:490,38,0	1/1:2,14:16:48.10:567,48,0	1/1:0,20:22:60.16:737,60,0	1/1:1,8:9:24.08:316,24,0	1/1:1,21:22:66.17:814,66,0	1/1:5,14:18:54.16:720,54,0	1/1:0,22:22:66.13:790,66,0	1/1:2,26:28:81.21:970,81,0
chr10	49497513	.	T	TC	14937.53	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=8.668;DP=503;FS=2.739;HRun=0;HaplotypeScore=130.6058;InbreedingCoeff=0.9817;MQ=67.99;MQ0=0;MQRankSum=-4.831;QD=32.83;ReadPosRankSum=2.277;VQSLOD=4.5744;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:84.28:0,84,1173	1/1:3,9:12:33.04:341,33,0	0/0:13,0:13:36.09:0,36,460	0/0:7,0:7:17.86:0,18,185	1/1:7,28:35:81.12:927,81,0	1/1:3,14:17:51.09:600,51,0	1/1:0,4:4:12.02:131,12,0	1/1:4,26:30:84.21:998,84,0	1/1:1,12:13:36.07:412,36,0	1/1:6,32:38:99:1487,111,0	1/1:0,23:23:66.10:774,66,0	1/1:2,9:11:30.07:371,30,0	1/1:2,15:17:42.06:477,42,0	1/1:1,11:12:33.02:355,33,0	1/1:2,16:18:51.11:604,51,0	1/1:3,11:14:33.05:371,33,0	1/1:1,11:12:30.07:368,30,0	1/1:1,5:6:18.05:215,18,0	1/1:3,9:12:33.11:465,33,0	1/1:3,21:24:69.16:819,69,0	1/1:1,14:15:39.11:481,39,0	1/1:1,14:15:45.06:540,45,0	1/1:3,20:23:60.04:690,60,0	1/1:2,8:10:24.08:306,24,0	1/1:1,21:22:66.11:778,66,0	1/1:5,15:19:54.16:722,54,0	1/1:2,22:24:66.04:766,66,0	1/1:2,26:28:81.13:938,81,0
chr10	49498220	.	ATCTAATTTCT	A	12412.75	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=11.889;DP=675;FS=7.164;HRun=0;HaplotypeScore=213.7280;InbreedingCoeff=0.9977;MQ=58.34;MQ0=5;MQRankSum=-15.142;QD=78.56;ReadPosRankSum=2.656;VQSLOD=4.1589;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,114,5560	0/0:8,0:8:24.08:0,24,1130	0/0:31,0:20:57.18:0,57,2742	0/0:38,0:34:84.76:0,85,3921	1/1:5,25:30:69.19:2080,69,0	0/0:20,0:20:51.18:0,51,2703	0/0:21,0:21:54.17:0,54,2298	0/0:34,0:33:96.31:0,96,4610	0/0:26,0:26:66.23:0,66,3331	1/1:4,18:22:60.21:1932,60,0	1/1:0,12:12:30.10:923,30,0	0/0:24,0:24:57.15:0,57,2504	0/0:24,0:24:66.23:0,66,3467	1/1:3,17:20:54.19:1712,54,0	0/0:33,0:33:99:0,99,4797	0/0:16,0:16:36.12:0,36,1766	1/1:3,18:21:48.16:1560,48,0	1/1:7,2:10:18.06:477,18,0	0/0:23,0:21:57.20:0,57,2826	0/0:37,0:37:99:0,105,5247	0/0:28,0:28:75.26:0,75,3762	0/0:21,0:21:63.22:0,63,3146	0/0:25,0:25:54.19:0,54,2682	0/0:34,0:34:87.30:0,87,4371	1/1:2,17:19:45.15:1460,45,0	1/1:1,16:17:48.16:1576,48,0	0/0:31,0:31:78.27:0,78,3934	1/1:0,7:7:21.07:692,21,0
chr10	49498268	.	CA	C	538.44	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=4.999;DP=644;FS=0.000;HRun=1;HaplotypeScore=166.3032;InbreedingCoeff=0.7768;MQ=66.83;MQ0=0;MQRankSum=-1.572;QD=11.97;ReadPosRankSum=0.616;VQSLOD=2.1007;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,111,1719	1/1:4,9:13:36.73:258,37,0	0/0:34,1:31:80.82:0,81,1170	0/0:25,0:21:38.23:0,38,801	0/0:16,0:16:23.10:0,23,294	0/0:21,0:21:51.14:0,51,672	0/0:23,0:23:57.17:0,57,758	0/0:36,0:36:99:0,108,1521	0/0:25,0:25:57.78:0,58,753	0/0:21,0:21:55.65:0,56,689	0/1:8,0:8:9.57:10,0,70	0/0:23,0:23:56.60:0,57,676	0/0:33,0:33:86.73:0,87,1086	0/0:23,0:23:60.45:0,60,678	1/1:8,16:24:48.82:398,49,0	0/0:22,0:22:54.11:0,54,683	0/0:22,0:22:42.31:0,42,698	0/0:17,0:17:48.16:0,48,642	0/0:16,0:16:48.13:0,48,683	0/0:26,0:26:72.21:0,72,997	0/0:31,0:31:81.72:0,82,1046	0/0:19,0:19:44.96:0,45,555	0/0:20,0:20:38.90:0,39,436	0/0:44,0:44:99:0,111,1459	0/0:19,0:19:53.87:0,54,635	0/0:15,0:15:25.27:0,25,514	0/0:24,0:24:47.44:0,47,616	0/0:4,0:4:9.03:0,9,114
chr10	49498270	.	C	CCCT	21786.71	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-5.996;DP=659;FS=19.095;HRun=0;HaplotypeScore=116.4308;InbreedingCoeff=0.9714;MQ=65.96;MQ0=0;MQRankSum=-3.878;QD=38.84;ReadPosRankSum=4.306;VQSLOD=4.7669;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:93.22:0,93,1292	1/1:4,0:13:36.12:697,36,0	0/0:34,0:30:37.89:0,38,448	0/0:25,0:21:27.05:0,27,340	1/1:11,4:16:23.91:373,24,0	1/1:4,17:21:39.13:787,39,0	1/1:3,23:28:51.17:1063,51,0	1/1:16,18:35:54.04:822,54,0	1/1:3,22:26:51.18:1063,51,0	1/1:6,16:25:54.10:989,54,0	1/1:5,3:8:15.05:277,15,0	1/1:3,20:24:48.16:999,48,0	1/1:3,26:31:72.24:1468,72,0	1/1:6,18:24:57.15:1111,57,0	1/1:8,0:24:58.20:1069,58,0	1/1:3,20:25:51.17:1040,51,0	1/1:11,13:24:51.06:903,51,0	1/1:1,16:18:45.15:938,45,0	1/1:8,7:15:21.02:298,21,0	1/1:7,18:25:44.99:793,45,0	1/1:8,24:32:60.21:1250,60,0	1/1:2,18:21:41.97:783,42,0	1/1:1,17:20:36.12:738,36,0	1/1:7,37:45:96.33:1974,96,0	1/1:7,12:19:39.07:756,39,0	1/1:8,8:16:41.97:671,42,0	1/1:7,16:23:36.12:739,36,0	1/1:0,3:3:9.03:187,9,0
chr10	49498545	.	A	ATT	4897.27	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=11.021;DP=453;FS=12.732;HRun=9;HaplotypeScore=68.0059;InbreedingCoeff=0.9132;MQ=70.89;MQ0=1;MQRankSum=-4.182;QD=31.19;ReadPosRankSum=2.202;VQSLOD=3.6892;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,108,1149	0/0:4,0:4:8.89:0,9,67	0/0:17,0:10:12.70:0,13,123	0/0:13,0:11:14.59:0,15,129	1/1:4,13:18:39.13:596,39,0	0/0:19,0:19:48.10:0,48,502	0/0:7,0:7:18.04:0,18,192	0/0:33,0:33:75.13:0,75,785	0/0:11,0:11:27.05:0,27,279	1/1:2,14:17:48.09:625,48,0	1/1:4,10:15:30.07:434,30,0	0/0:11,0:11:33.08:0,33,350	0/0:12,0:12:27.06:0,27,287	1/1:6,6:13:24.04:341,24,0	0/0:10,0:10:20.66:0,21,141	0/0:7,0:7:17.42:0,17,95	1/1:5,16:23:45.01:671,45,0	1/1:2,16:20:51.15:743,51,0	0/0:20,0:20:54.12:0,54,568	0/0:22,0:22:51.10:0,51,543	0/0:8,0:8:15.03:0,15,160	0/0:17,0:17:45.04:0,45,451	0/0:13,0:13:36.06:0,36,375	0/1:6,0:6:1.74:2,0,141	1/1:2,20:22:51.13:754,51,0	1/1:3,15:18:45.14:640,45,0	0/0:28,0:28:75.06:0,75,760	1/1:1,4:5:6.02:92,6,0
chr10	49498554	.	TA	T	1430.53	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=11.480;DP=442;FS=8.242;HRun=7;HaplotypeScore=68.2469;InbreedingCoeff=0.8502;MQ=74.19;MQ0=1;MQRankSum=-0.016;QD=8.62;ReadPosRankSum=1.562;VQSLOD=0.7034;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,114,1377	1/1:1,4:5:6.01:61,6,0	0/0:21,0:13:28.63:0,29,221	0/0:16,0:13:11.85:0,12,72	1/1:17,0:17:41.76:211,42,0	0/0:18,0:18:51.14:0,51,607	0/0:7,0:7:21.06:0,21,249	0/0:33,0:33:90.23:0,90,1046	0/0:9,0:9:24.06:0,24,283	1/1:22,0:22:34.81:194,35,0	1/1:11,0:11:1.19:58,1,0	0/0:12,0:12:33.05:0,33,377	0/0:12,0:12:33.07:0,33,369	1/1:8,0:8:13.30:66,13,0	1/1:1,8:9:18.04:183,18,0	0/1:8,0:8:24.79:28,0,25	1/1:21,0:21:39.24:180,39,0	1/1:19,0:19:49.40:227,49,0	0/0:19,0:19:48.15:0,48,588	0/0:19,0:19:51.15:0,51,617	0/0:6,0:6:18.04:0,18,208	0/0:18,0:18:42.06:0,42,476	0/0:14,0:14:36.10:0,36,427	0/0:8,0:8:21.03:0,21,224	1/1:26,0:26:55:285,55,0	1/1:16,0:16:27.49:126,27,0	0/0:25,0:25:63.20:0,63,774	1/1:4,0:4:5.52:24,6,0
chr10	49499299	.	T	TAATGTAATATGTA	1843.66	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-5.404;DP=444;FS=7.104;HRun=0;HaplotypeScore=149.7397;InbreedingCoeff=0.9616;MQ=74.81;MQ0=0;MQRankSum=-5.325;QD=73.75;ReadPosRankSum=1.944;VQSLOD=2.9840;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:33.11:0,33,1079	1/1:0,5:12:15.05:980,15,0	0/0:12,0:12:30.09:0,30,916	0/0:6,0:6:15.02:0,15,453	0/0:24,0:24:72.25:0,72,2613	0/0:18,0:18:51.17:0,51,1852	0/0:6,0:6:18.06:0,18,645	0/0:34,0:34:99:0,99,3189	0/0:15,0:15:42.13:0,42,1413	0/0:17,0:17:45.15:0,45,1649	0/0:23,0:23:63.20:0,63,2179	0/0:13,0:13:39.12:0,39,1405	0/0:20,0:20:48.16:0,48,1787	0/0:11,0:11:30.10:0,30,1059	1/1:0,5:13:15.05:979,15,0	0/0:17,0:17:45.15:0,45,1557	0/0:18,0:18:48.16:0,48,1718	0/0:6,0:6:15.05:0,15,566	0/0:20,0:20:51.17:0,51,1751	0/0:20,0:20:60.18:0,60,1876	0/0:12,0:12:36.12:0,36,1234	0/0:9,0:9:27.09:0,27,862	0/0:18,0:18:54.19:0,54,2107	0/0:11,0:11:33.10:0,33,1005	0/0:24,0:24:72.23:0,72,2650	0/0:13,0:13:39.13:0,39,1422	0/0:31,0:31:93.32:0,93,3262	0/0:10,0:10:30.05:0,30,1012
chr10	49499829	.	TC	T	1513.89	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.050;DP=622;FS=7.385;HRun=1;HaplotypeScore=56.1220;InbreedingCoeff=0.9993;MQ=76.71;MQ0=0;MQRankSum=-1.716;QD=36.04;ReadPosRankSum=1.769;VQSLOD=3.5348;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:66.23:0,66,1055	1/1:0,14:14:42.14:587,42,0	0/0:15,0:15:42.14:0,42,671	0/0:11,0:11:29.45:0,29,419	0/0:31,0:31:93.30:0,93,1462	0/0:27,0:27:81.26:0,81,1272	0/0:19,0:19:57.19:0,57,911	0/0:30,0:30:90.29:0,90,1391	0/0:17,0:17:51.17:0,51,815	0/0:33,0:33:96.32:0,96,1517	0/0:22,0:22:66.23:0,66,1055	0/0:18,0:18:54.18:0,54,863	0/0:29,0:29:87.30:0,87,1388	0/0:18,0:18:51.17:0,51,815	1/1:0,28:28:75.25:1048,75,0	0/0:22,0:22:66.21:0,66,1032	0/0:15,0:15:45.15:0,45,713	0/0:10,0:10:30.10:0,30,480	0/0:24,0:24:72.24:0,72,1129	0/0:32,0:32:96.33:0,96,1522	0/0:13,0:13:39.13:0,39,611	0/0:18,0:18:54.18:0,54,863	0/0:21,0:21:63.21:0,63,995	0/0:13,0:13:39.13:0,39,623	0/0:30,0:29:90.31:0,90,1436	0/0:29,0:29:87.30:0,87,1385	0/0:45,0:44:99:0,135,2100	0/0:16,0:16:48.16:0,48,767
chr10	49502080	.	C	CATCCATCCATCT	11316.02	PASS	AC=10;AF=0.185;AN=54;BaseQRankSum=-4.860;DP=626;FS=2.043;HRun=0;HaplotypeScore=193.5209;InbreedingCoeff=0.9903;MQ=65.28;MQ0=0;MQRankSum=-11.519;QD=68.17;ReadPosRankSum=-4.530;VQSLOD=3.5909;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:17:30.05:0,30,878	0/0:11,0:11:27.09:0,27,942	0/0:22,0:20:15.06:0,15,910	0/0:11,0:11:24.08:0,24,549	0/0:28,0:28:63.20:0,63,2011	0/0:28,0:28:78.27:0,78,2456	0/0:12,0:12:27.09:0,27,769	1/1:43,0:43:84.27:3109,84,0	0/0:13,0:13:30.09:0,30,946	0/0:22,0:22:51.17:0,51,1634	0/0:23,0:23:51.17:0,51,1560	0/0:18,0:18:48.15:0,48,1574	0/0:24,0:24:57.16:0,57,1830	0/0:28,0:28:69.24:0,69,2320	0/0:38,0:38:90.28:0,90,2960	1/1:7,12:22:21.07:1176,21,0	0/0:15,0:15:42.11:0,42,1342	0/0:19,0:19:42.12:0,42,1304	1/1:11,14:25:63.22:3070,63,0	1/1:19,17:37:33.11:1644,33,0	./.	0/0:29,0:29:69.24:0,69,2299	0/0:22,0:22:57.20:0,57,1819	0/0:7,0:7:15.05:0,15,466	0/0:16,0:16:33.09:0,33,1035	0/0:31,0:31:72.24:0,72,2394	1/1:14,21:38:48.16:2317,48,0	0/0:18,0:18:36.12:0,36,1225
chr10	49503063	.	ACTCACTCAGCTTTTTTTTT	A	6351.59	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=12.812;DP=653;FS=4.452;HRun=0;HaplotypeScore=318.7296;InbreedingCoeff=0.9923;MQ=79.14;MQ0=0;MQRankSum=-6.975;QD=48.49;ReadPosRankSum=-0.053;VQSLOD=3.6239;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:93.32:0,93,6895	0/0:17,0:17:48.16:0,48,3420	0/0:12,0:12:24.07:0,24,739	0/0:27,0:27:42.05:0,42,1230	0/0:33,0:33:87.30:0,87,5612	0/0:20,0:20:57.18:0,57,3655	0/0:22,0:22:54.16:0,54,2948	1/1:7,14:21:42.02:709,42,0	0/0:21,0:21:54.17:0,54,3567	0/0:28,0:28:78.23:0,78,4761	0/0:20,0:20:54.19:0,54,3936	0/0:13,0:13:30.10:0,30,2040	0/0:24,0:24:66.22:0,66,4817	0/0:27,0:27:69.24:0,69,5010	0/0:25,0:25:60.19:0,60,3883	1/1:1,22:23:45.15:2232,45,0	0/0:27,0:27:66.23:0,66,4630	0/0:19,0:19:51.12:0,51,2923	1/1:7,11:18:33.04:712,33,0	1/1:6,21:27:48.09:1223,48,0	1/1:5,15:20:12.04:243,12,0	0/0:26,0:26:69.24:0,69,4711	0/0:36,0:36:81.21:0,81,6560	0/0:32,0:32:87.30:0,87,6668	0/0:27,0:27:72.25:0,72,5548	0/0:23,0:23:54.18:0,54,3295	1/1:4,18:22:24.08:1233,24,0	0/0:9,0:9:24.08:0,24,1608
chr10	49509171	.	CCAAA	C	3862.32	PASS	AB=1.000;AC=17;AF=0.315;AN=54;BaseQRankSum=-0.147;DP=402;FS=0.517;HRun=0;HaplotypeScore=64.4160;InbreedingCoeff=0.9079;MQ=44.25;MQ0=19;MQRankSum=-0.068;QD=31.40;ReadPosRankSum=4.827;VQSLOD=3.5202;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:20:39.10:0,39,804	0/0:10,0:9:20.42:0,20,80	0/0:8,0:3:6.02:0,6,113	0/0:10,0:4:9.03:0,9,132	1/1:0,12:13:27.07:499,27,0	0/0:14,0:9:18.03:0,18,430	0/0:22,0:19:41.99:0,42,985	0/0:17,0:6:14.84:0,15,103	0/0:22,0:17:38.95:0,39,724	1/1:1,10:10:27.02:408,27,0	1/1:1,13:13:21.07:413,21,0	0/0:13,0:11:29.93:0,30,567	0/0:14,0:10:27.09:0,27,564	1/1:2,10:10:18.06:363,18,0	0/1:13,0:12:0.98:1,0,76	0/0:12,0:11:17.99:0,18,370	1/1:1,18:17:33.11:660,33,0	./.	0/0:16,0:10:26.69:0,27,211	0/0:17,0:16:13.47:0,13,121	0/0:9,0:8:22.82:0,23,183	0/0:17,0:15:42.07:0,42,882	0/0:19,0:16:48.06:0,48,1158	0/0:14,0:12:24.08:0,24,616	1/1:0,10:11:21.02:354,21,0	1/1:3,14:16:48.13:861,48,0	0/0:19,0:19:21.14:0,21,165	1/1:2,8:8:15.05:304,15,0
chr10	49509172	.	CAAA	C	2724.59	PASS	AB=0.715;AC=28;AF=0.519;AN=54;BaseQRankSum=6.525;DP=415;FS=3.895;HRun=14;HaplotypeScore=62.4985;InbreedingCoeff=0.8011;MQ=43.84;MQ0=23;MQRankSum=-2.402;QD=12.50;ReadPosRankSum=5.513;VQSLOD=0.7673;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:21:30.06:0,30,466	1/1:2,8:9:21.05:245,21,0	0/0:10,0:3:6.02:0,6,91	0/0:11,0:4:9.03:0,9,124	1/1:14,0:13:26.85:206,27,0	0/0:15,0:11:18.06:0,18,320	0/0:20,0:19:37.92:0,38,648	0/1:10,1:6:8.92:31,0,9	0/0:21,0:17:27.09:0,27,490	1/1:12,0:11:17.90:138,18,0	1/1:15,0:13:20.86:149,21,0	0/0:13,0:11:24.08:0,24,428	0/0:11,0:10:27.05:0,27,416	1/1:10,0:10:17.91:133,18,0	1/1:1,9:12:19.56:226,20,0	0/0:5,0:10:15.05:0,15,249	1/1:20,0:17:32.80:240,33,0	./.	0/1:11,7:12:60.65:217,0,61	1/1:5,10:15:33.01:368,33,0	1/1:3,3:8:3.27:94,3,0	0/0:16,0:15:39.11:0,39,651	0/0:18,0:16:42.12:0,42,751	0/0:10,0:13:22.32:0,22,398	1/1:13,0:11:20.81:146,21,0	1/1:19,0:16:41.63:302,42,0	1/1:4,12:19:28.56:331,29,0	1/1:10,0:8:14.92:111,15,0
chr10	49537319	.	T	TG	4259.60	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-14.314;DP=566;FS=2.970;HRun=6;HaplotypeScore=66.1121;InbreedingCoeff=0.9903;MQ=84.08;MQ0=1;MQRankSum=-1.869;QD=33.02;ReadPosRankSum=2.390;VQSLOD=5.0635;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:39.08:0,39,398	0/0:6,0:6:18.04:0,18,184	0/0:25,0:25:63.02:0,63,616	0/0:15,0:14:35.56:0,36,340	0/0:24,0:24:66.15:0,66,673	1/1:1,12:13:33.11:415,33,0	1/1:2,8:10:24.08:302,24,0	0/0:36,0:36:84.18:0,84,857	1/1:1,18:19:54.17:676,54,0	0/0:34,0:34:96.18:0,96,962	0/0:17,0:17:51.12:0,51,520	1/1:2,22:24:66.21:830,66,0	1/1:2,20:22:57.18:717,57,0	0/0:20,0:20:57.13:0,57,581	0/0:18,0:18:45.10:0,45,459	0/0:18,0:17:54.12:0,54,551	0/0:21,0:21:60.13:0,60,612	0/0:7,0:7:15.03:0,15,153	0/0:27,0:27:75.16:0,75,759	0/0:39,0:39:99:0,111,1125	0/0:14,0:14:39.09:0,39,398	1/1:0,10:10:30.10:377,30,0	1/1:1,12:13:30.10:377,30,0	1/1:3,15:18:45.14:566,45,0	0/0:29,0:29:78.17:0,78,796	0/0:30,0:30:78.17:0,78,791	0/0:37,0:37:99:0,108,1101	0/0:4,0:4:12.03:0,12,122
chr10	49540398	.	TA	T	1520.12	PASS	AB=0.955;AC=12;AF=0.214;AN=56;BaseQRankSum=6.545;DP=346;FS=0.000;HRun=10;HaplotypeScore=54.8862;InbreedingCoeff=0.6597;MQ=60.43;MQ0=9;MQRankSum=1.475;QD=15.20;ReadPosRankSum=-2.178;VQSLOD=3.1258;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:13:22.25:0,22,262	0/0:5,0:4:9.01:0,9,91	0/1:7,0:4:5.11:5,0,49	0/0:2,0:1:2.22:0,2,7	0/0:18,0:16:41.12:0,41,269	0/0:10,0:9:24.06:0,24,265	0/0:17,1:17:45.07:0,45,475	1/1:6,19:24:56.90:482,57,0	0/0:11,0:11:21.06:0,21,232	0/0:12,0:12:31.55:0,32,172	0/0:17,0:16:16.78:0,17,176	0/1:9,1:10:4.93:5,0,178	0/0:12,0:12:30.08:0,30,332	0/0:10,0:10:28.91:0,29,158	0/0:12,1:13:4.01:0,4,262	0/0:11,0:11:27.06:0,27,292	0/0:12,0:12:12.60:0,13,160	0/0:12,0:12:4.59:0,5,116	1/1:0,13:13:35.93:312,36,0	1/1:5,21:22:56.98:495,57,0	1/1:2,6:6:12:104,12,0	0/0:10,1:11:1.01:0,1,230	0/0:8,0:8:21.06:0,21,232	0/0:5,0:5:15.03:0,15,158	0/0:11,1:12:2.96:0,3,118	0/0:15,0:15:17.10:0,17,188	1/1:0,11:11:32.99:286,33,0	0/0:18,0:17:36.98:0,37,248
chr10	49540632	.	CAGAGAGAGAGAGAGAGAGAGAGAG	C	33.70	PASS	AC=8;AF=0.154;AN=52;BaseQRankSum=2.563;DP=505;FS=8.541;HRun=0;HaplotypeScore=251.7992;InbreedingCoeff=0.5347;MQ=74.02;MQ0=22;MQRankSum=-0.423;QD=0.50;ReadPosRankSum=-0.615;VQSLOD=1.3971;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:25:27.09:0,27,1329	0/0:5,0:5:9.03:0,9,419	0/0:40,0:27:3.01:0,3,42	0/0:52,0:21:1.36:0,1,3	1/1:18,0:18:0.47:1,0,0	0/0:12,0:12:12.93:0,13,572	0/0:15,0:15:12.93:0,13,247	0/0:34,0:34:28.24:0,28,389	0/0:17,0:17:16.30:0,16,712	1/1:16,5:21:6.38:53,6,0	./.	0/0:8,0:8:6.02:0,6,298	0/0:8,0:8:9.03:0,9,412	./.	0/0:15,0:15:12.04:0,12,348	0/0:12,0:12:15.05:0,15,694	0/0:19,0:11:4.78:0,5,24	0/0:15,0:10:6.77:0,7,36	0/0:21,0:19:23.90:0,24,765	0/0:15,0:15:9.92:0,10,287	0/0:18,0:17:18.06:0,18,765	0/0:13,0:13:12.04:0,12,405	0/0:16,0:16:15.05:0,15,273	0/0:14,0:13:15.05:0,15,710	1/1:9,0:9:0.47:1,0,0	1/1:19,0:18:4.05:77,4,0	0/0:24,0:23:15.05:0,15,554	0/0:10,0:9:10.27:0,10,225
chr10	49541642	.	AT	A	2349.16	PASS	AB=0.755;AC=12;AF=0.214;AN=56;BaseQRankSum=10.653;DP=578;FS=4.284;HRun=9;HaplotypeScore=67.0011;InbreedingCoeff=0.8435;MQ=79.76;MQ0=2;MQRankSum=1.859;QD=16.54;ReadPosRankSum=-0.802;VQSLOD=3.7076;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:72.20:0,72,820	0/0:7,0:7:18.05:0,18,208	0/1:26,1:23:1.37:1,0,253	0/0:36,1:22:3.52:0,4,116	0/0:25,0:25:66.20:0,66,761	0/0:25,0:25:60.16:0,60,680	0/0:11,0:11:27.55:0,28,313	1/1:4,17:21:51.02:467,51,0	0/0:20,0:20:51.14:0,51,580	0/0:25,0:25:66.19:0,66,754	0/0:20,0:20:51.11:0,51,550	0/0:22,0:22:63.18:0,63,719	0/0:15,0:15:42.11:0,42,475	0/0:17,0:17:48.14:0,48,554	0/0:21,0:20:60.17:0,60,682	0/1:2,10:12:1.60:242,0,2	0/0:24,0:24:69.10:0,69,748	0/0:12,0:12:30.05:0,30,331	1/1:8,15:23:44.98:408,45,0	1/1:0,20:20:56.90:502,57,0	1/1:2,12:14:33.02:302,33,0	0/0:25,0:25:63.19:0,63,727	0/0:22,0:22:60.12:0,60,659	0/0:22,0:22:57.17:0,57,658	0/0:20,0:20:51.15:0,51,589	0/0:29,0:29:81.20:0,81,906	1/1:2,23:25:66.03:604,66,0	0/0:7,0:7:21.06:0,21,242
chr10	49541984	.	A	AG	5233.78	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-11.198;DP=618;FS=0.000;HRun=4;HaplotypeScore=65.1692;InbreedingCoeff=0.9939;MQ=79.24;MQ0=0;MQRankSum=-1.380;QD=35.36;ReadPosRankSum=-0.041;VQSLOD=5.0677;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,111,1259	0/0:6,0:6:18.03:0,18,192	0/0:15,0:15:41.99:0,42,455	0/0:20,0:20:44.85:0,45,457	0/0:17,0:17:45.10:0,45,490	0/0:22,0:22:57.16:0,57,646	0/0:35,0:35:99:0,102,1156	1/1:4,16:20:48.16:651,48,0	0/0:22,0:22:60.14:0,60,668	0/0:22,0:22:54.15:0,54,613	0/0:14,0:14:42.12:0,42,473	0/0:24,0:24:72.19:0,72,806	0/0:25,0:25:69.20:0,69,783	0/0:21,0:21:60.15:0,60,671	0/0:26,0:26:75.19:0,75,835	1/1:1,17:18:17.13:623,17,0	0/0:27,0:27:78.22:0,78,884	0/0:21,0:21:63.18:0,63,714	1/1:4,28:32:81.25:1089,81,0	1/1:0,14:14:42.14:573,42,0	1/1:1,44:45:99:1560,114,0	0/0:24,0:24:66.17:0,66,739	0/0:7,0:7:21.06:0,21,238	0/0:27,0:27:69.20:0,69,783	0/0:25,0:25:66.19:0,66,749	0/0:22,0:22:63.17:0,63,707	1/1:0,19:19:54.18:738,54,0	0/0:7,0:7:18.04:0,18,195
chr10	49544046	.	GT	G	5677.12	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=5.780;DP=624;FS=0.671;HRun=6;HaplotypeScore=65.8271;InbreedingCoeff=0.9998;MQ=78.79;MQ0=0;MQRankSum=-0.494;QD=28.24;ReadPosRankSum=3.417;VQSLOD=5.4962;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:81.23:0,81,1035	0/0:10,0:10:30.09:0,30,382	0/0:17,0:17:41.78:0,42,506	0/0:12,0:12:33.11:0,33,427	1/1:0,20:20:48.12:515,48,0	0/0:21,0:21:63.18:0,63,802	0/0:17,0:17:48.16:0,48,632	0/0:30,0:30:78.25:0,78,1014	0/0:22,0:22:60.17:0,60,762	1/1:2,31:33:93.17:979,93,0	1/1:2,16:18:42.10:451,42,0	0/0:15,0:15:39.13:0,39,513	0/0:23,0:23:66.21:0,66,868	1/1:0,14:14:33.08:355,33,0	0/0:24,0:24:72.21:0,72,929	0/0:26,0:26:75.23:0,75,972	1/1:1,27:28:72.18:773,72,0	1/1:0,15:15:39.10:419,39,0	0/0:17,0:17:51.15:0,51,656	0/0:27,0:27:78.23:0,78,996	0/0:20,0:20:60.18:0,60,763	0/0:27,0:27:78.24:0,78,1012	0/0:24,0:24:69.22:0,69,907	0/0:22,0:22:63.18:0,63,801	1/1:1,29:30:84.21:903,84,0	1/1:2,24:26:69.16:734,69,0	0/0:40,0:40:99:0,120,1546	1/1:0,17:17:51.13:548,51,0
chr10	49547391	.	G	GT	18137.48	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-16.698;DP=670;FS=3.314;HRun=0;HaplotypeScore=61.5181;InbreedingCoeff=0.9987;MQ=86.04;MQ0=0;MQRankSum=-1.919;QD=44.24;ReadPosRankSum=0.130;VQSLOD=5.1564;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:63.21:0,63,880	1/1:0,15:15:42.14:671,42,0	0/0:24,0:24:65.61:0,66,851	0/0:20,0:20:57.07:0,57,694	1/1:0,32:32:87.30:1389,87,0	0/0:23,0:23:69.22:0,69,945	0/0:25,0:25:75.24:0,75,1031	1/1:0,44:45:99:2053,135,0	0/0:27,0:27:78.26:0,78,1091	1/1:0,28:28:84.29:1337,84,0	1/1:0,20:20:45.15:719,45,0	0/0:26,0:26:78.25:0,78,1074	0/0:27,0:27:81.27:0,81,1132	1/1:0,16:16:48.16:767,48,0	1/1:0,24:24:63.21:1007,63,0	1/1:0,31:31:87.30:1391,87,0	1/1:1,16:17:48.16:767,48,0	1/1:1,10:11:27.09:431,27,0	1/1:0,23:23:69.24:1101,69,0	1/1:0,28:28:84.29:1342,84,0	1/1:0,18:18:48.16:755,48,0	0/0:22,0:22:63.20:0,63,864	0/0:23,0:23:69.21:0,69,939	0/0:21,0:21:63.21:0,63,881	1/1:0,32:32:87.30:1390,87,0	1/1:0,31:31:90.31:1436,90,0	1/1:1,29:30:81.28:1294,81,0	1/1:0,9:9:18.06:288,18,0
chr10	49547738	.	TTG	T	99.11	PASS	AB=0.921;AC=8;AF=0.148;AN=54;BaseQRankSum=0.781;DP=605;FS=3.807;HRun=0;HaplotypeScore=90.1918;InbreedingCoeff=0.1185;MQ=60.92;MQ0=10;MQRankSum=-0.292;QD=0.77;ReadPosRankSum=0.492;VQSLOD=1.5760;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:7.39:0,7,233	0/1:13,0:16:5.09:5,0,39	0/0:23,0:18:0:0,0,0	./.	0/0:37,0:36:17.99:0,18,174	0/1:16,3:19:5.67:6,0,283	0/0:14,0:14:11.93:0,12,178	0/0:39,0:36:2.89:0,3,86	0/0:17,0:17:14.95:0,15,139	0/0:32,0:31:27.89:0,28,282	0/0:12,0:16:6:0,6,52	0/0:19,0:18:12.01:0,12,156	0/1:14,0:14:2.44:2,0,224	0/0:14,0:25:8.99:0,9,75	0/0:18,0:18:17.72:0,18,162	1/1:8,3:12:11.87:112,12,0	0/0:14,0:24:16.20:0,16,149	0/0:26,0:26:32.95:0,33,323	0/0:11,0:11:3.01:0,3,45	0/1:23,2:26:75.04:75,0,150	0/1:23,2:24:3.78:4,0,225	0/0:20,0:19:22.95:0,23,262	0/1:13,3:16:11.69:12,0,206	0/0:21,0:21:21.03:0,21,285	0/0:19,0:25:12:0,12,118	0/0:26,0:26:33.90:0,34,372	0/0:17,0:17:11.72:0,12,95	0/0:10,0:14:8.98:0,9,74
chr10	49548970	.	GATGGATTAGGT	G	16400.59	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=18.080;DP=649;FS=4.786;HRun=0;HaplotypeScore=250.5053;InbreedingCoeff=0.9759;MQ=94.20;MQ0=0;MQRankSum=-17.300;QD=57.95;ReadPosRankSum=3.483;VQSLOD=4.3564;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,105,4555	0/0:12,0:12:36.12:0,36,2023	0/0:37,0:37:96.24:0,96,4349	0/0:31,0:31:81.28:0,81,3817	1/1:8,19:27:47.72:1330,48,0	0/0:22,0:22:63.18:0,63,2950	0/0:29,0:29:75.25:0,75,3555	1/1:12,14:26:42.10:1238,42,0	0/0:29,0:29:87.30:0,87,4893	1/1:7,17:24:48.15:1604,48,0	1/1:5,9:14:12.04:389,12,0	0/0:30,0:30:87.29:0,87,4700	0/0:31,0:31:81.23:0,81,4033	1/1:4,19:23:48.16:1513,48,0	0/0:45,0:45:99:0,129,6666	1/1:3,20:23:57.20:1837,57,0	1/1:2,7:9:15.03:411,15,0	1/1:2,7:9:15.05:445,15,0	1/1:9,2:11:6.02:212,6,0	1/1:3,23:26:60.20:1866,60,0	1/1:9,12:21:21.07:630,21,0	0/0:23,0:23:57.15:0,57,2536	0/0:19,0:19:57.17:0,57,2785	0/0:17,0:17:45.14:0,45,2331	1/1:5,16:21:39.13:1284,39,0	1/1:4,16:20:48.16:1635,48,0	1/1:5,12:17:36.12:1269,36,0	1/1:0,12:12:21.07:740,21,0
chr10	49549495	.	T	TCAGAACACTTG	37970.53	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=5.077;DP=422;FS=14.017;HRun=0;HaplotypeScore=176.0746;InbreedingCoeff=0.9711;MQ=88.69;MQ0=0;MQRankSum=-14.907;QD=124.90;ReadPosRankSum=1.009;VQSLOD=4.5848;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,114,3609	0/0:4,0:4:12.04:0,12,424	0/0:18,0:18:49.77:0,50,1088	0/0:28,0:28:66.23:0,66,2186	1/1:8,4:12:24.08:874,24,0	1/1:8,11:19:57.18:2710,57,0	1/1:5,4:9:24.08:1273,24,0	1/1:16,4:20:45.15:1641,45,0	1/1:5,5:11:33.11:1726,33,0	1/1:10,3:12:32.97:1102,33,0	1/1:2,4:7:15.05:777,15,0	1/1:8,12:20:48.16:2534,48,0	1/1:7,8:15:36.12:2001,36,0	1/1:6,7:13:36.12:1913,36,0	0/0:29,0:29:81.25:0,81,2592	1/1:4,9:13:39.13:2022,39,0	1/1:5,6:11:30.10:1408,30,0	1/1:2,3:5:15.01:601,15,0	1/1:9,4:13:36.08:1284,36,0	1/1:4,8:12:33.11:1723,33,0	1/1:3,2:5:15.05:761,15,0	1/1:6,5:11:24.08:1156,24,0	1/1:12,11:23:60.21:2647,60,0	1/1:6,1:7:18.06:712,18,0	1/1:6,11:17:42.14:2205,42,0	1/1:7,11:18:54.19:2974,54,0	1/1:10,13:24:72.23:3240,72,0	1/1:2,3:5:12.04:686,12,0
chr10	49549518	.	TCTGTAACC	T	14880.11	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=12.677;DP=355;FS=2.605;HRun=0;HaplotypeScore=167.6889;InbreedingCoeff=0.8426;MQ=95.23;MQ0=0;MQRankSum=-14.014;QD=62.26;ReadPosRankSum=2.946;VQSLOD=5.0791;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,117,4997	0/0:6,0:6:18.06:0,18,718	0/0:17,0:17:51.18:0,51,2079	0/0:26,0:26:71.93:0,72,2831	1/1:2,7:9:24.08:646,24,0	1/1:3,11:14:33.11:922,33,0	1/1:2,6:8:6.02:168,6,0	1/1:4,12:16:33.10:808,33,0	1/1:2,5:7:18.06:503,18,0	1/1:1,10:10:27.09:755,27,0	1/1:1,4:5:12.04:335,12,0	1/1:2,18:20:54.19:1509,54,0	1/1:0,17:17:48.16:1341,48,0	1/1:1,9:10:27.09:754,27,0	0/0:27,0:27:81.28:0,81,3531	1/1:3,12:15:36.12:1006,36,0	1/1:0,8:8:18.06:502,18,0	1/1:0,2:2:3.01:84,3,0	1/1:5,7:12:18.06:463,18,0	1/1:2,6:8:12.04:290,12,0	1/1:1,2:3:3.01:84,3,0	1/1:1,6:7:18.02:439,18,0	1/1:5,7:12:21.07:587,21,0	1/1:0,6:6:18.06:499,18,0	1/1:4,9:13:27.09:754,27,0	1/1:2,12:14:36.12:1007,36,0	1/1:2,16:17:48.16:1341,48,0	1/1:4,0:4:3.01:84,3,0
chr10	49549611	.	CAGAAATGTACCTTACCTCTCTACTCA	C	17003.04	PASS	AC=44;AF=0.815;AN=54;BaseQRankSum=11.214;DP=350;FS=0.000;HRun=0;HaplotypeScore=247.1357;InbreedingCoeff=0.7438;MQ=95.04;MQ0=0;MQRankSum=-10.569;QD=71.14;ReadPosRankSum=5.187;VQSLOD=3.4047;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:96.32:0,96,9200	0/0:8,0:8:24.08:0,24,2796	0/0:25,0:25:75.18:0,75,4009	0/0:20,0:20:57.20:0,57,3655	1/1:8,25:33:29.83:962,30,0	1/1:2,3:5:9.03:629,9,0	1/1:6,8:14:6.02:405,6,0	1/1:5,0:5:2.95:54,3,0	1/1:5,2:7:6.02:419,6,0	1/1:8,9:17:20.99:949,21,0	1/1:3,5:8:14.39:1044,14,0	1/1:5,3:8:9.03:629,9,0	1/1:9,4:13:12.04:836,12,0	1/1:5,2:7:5.11:417,5,0	0/0:18,0:18:51.18:0,51,5955	1/1:4,6:9:15.05:888,15,0	./.	1/1:4,3:7:9.03:499,9,0	1/1:1,7:8:21.01:727,21,0	1/1:5,4:9:12.04:550,12,0	1/1:2,3:5:3.01:144,3,0	1/1:2,6:8:15.05:891,15,0	1/1:7,5:12:15.01:858,15,0	1/1:4,2:6:6.02:265,6,0	1/1:5,23:28:36.12:2278,36,0	1/1:7,6:13:18.06:1257,18,0	1/1:6,9:15:30.10:2094,30,0	1/1:0,1:1:3.01:209,3,0
chr10	49549729	.	G	GA	15445.85	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-8.898;DP=580;FS=5.073;HRun=6;HaplotypeScore=60.5811;InbreedingCoeff=0.9963;MQ=63.66;MQ0=3;MQRankSum=-2.938;QD=31.65;ReadPosRankSum=3.597;VQSLOD=5.4630;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:63.06:0,63,623	1/1:1,7:8:21.07:264,21,0	0/0:32,0:20:47.56:0,48,448	0/0:38,0:23:46.48:0,46,429	1/1:8,20:28:66.21:830,66,0	1/1:2,13:15:36.12:453,36,0	1/1:0,10:10:30.10:377,30,0	1/1:5,23:28:69.21:855,69,0	1/1:1,12:13:30.10:377,30,0	1/1:1,19:20:54.15:653,54,0	1/1:2,13:15:39.08:473,39,0	1/1:3,10:13:39.12:486,39,0	1/1:6,11:17:45.10:544,45,0	1/1:2,12:14:33.11:415,33,0	1/1:2,16:18:42.13:528,42,0	1/1:1,12:13:33.11:415,33,0	1/1:5,30:35:87.28:1094,87,0	1/1:5,36:41:81.96:1156,82,0	1/1:2,19:20:57.18:715,57,0	1/1:3,21:23:60.19:755,60,0	1/1:0,12:12:33.11:415,33,0	1/1:1,17:18:45.14:566,45,0	1/1:5,24:29:69.22:868,69,0	1/1:1,15:16:45.14:561,45,0	1/1:3,22:25:66.21:830,66,0	1/1:5,23:28:69.22:867,69,0	1/1:4,16:20:57.13:686,57,0	1/1:0,7:7:21.07:264,21,0
chr10	49551205	.	T	TGAGA	942.37	PASS	AB=1.000;AC=31;AF=0.646;AN=48;BaseQRankSum=-1.449;DP=531;FS=13.276;HRun=0;HaplotypeScore=115.5121;InbreedingCoeff=0.4351;MQ=66.52;MQ0=9;MQRankSum=0.609;QD=3.11;ReadPosRankSum=-0.483;VQSLOD=1.3955;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:23:3:0,3,28	1/1:10,0:10:8.95:100,9,0	./.	./.	1/1:26,0:26:2.63:40,3,0	0/1:14,0:14:0.01:0,0,0	./.	1/1:20,0:19:1.82:5,2,0	0/1:18,0:18:0:0,0,0	1/1:16,0:15:14.40:168,14,0	1/1:16,0:15:3:29,3,0	0/0:10,0:10:0:0,0,0	0/0:22,0:21:0:0,0,0	1/1:16,0:16:4.83:44,5,0	1/1:16,8:26:12.01:231,12,0	1/1:14,1:22:5.95:51,6,0	1/1:15,0:14:9.03:140,9,0	1/1:17,0:15:6.02:88,6,0	./.	0/0:18,0:21:2.18:0,2,20	1/1:18,0:17:1.03:2,1,0	0/1:13,0:12:0:0,0,0	0/1:9,0:9:0:0,0,0	0/1:24,0:23:0:0,0,0	0/0:21,0:19:0:0,0,0	1/1:16,0:16:17.50:147,17,0	0/0:17,0:20:6.78:0,7,80	1/1:5,0:5:0.47:1,0,0
chr10	49551244	.	G	GC	199.45	PASS	AB=0.952;AC=15;AF=0.278;AN=54;BaseQRankSum=3.999;DP=419;FS=15.332;HRun=0;HaplotypeScore=69.8223;InbreedingCoeff=0.4580;MQ=58.45;MQ0=24;MQRankSum=2.720;QD=4.24;ReadPosRankSum=-3.843;VQSLOD=0.8189;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:28:57:0,57,703	0/0:8,0:8:15.54:0,16,186	0/0:35,0:23:57.09:0,57,667	0/0:69,0:20:45.08:0,45,569	0/0:19,0:19:23.70:0,24,328	1/1:3,0:3:6.64:26,7,0	1/1:3,0:2:2.68:11,3,0	0/0:24,0:19:51.10:0,51,680	1/1:1,0:1:3:27,3,0	0/0:11,0:10:27.08:0,27,352	0/0:12,0:11:12.04:0,12,166	1/1:1,2:2:3.01:46,3,0	1/1:1,2:2:3.01:36,3,0	0/0:14,0:14:21.07:0,21,286	0/0:26,0:25:36:0,36,395	0/0:16,0:15:8.12:0,8,157	0/0:17,0:16:33.08:0,33,446	0/0:16,0:13:36.12:0,36,492	0/0:12,0:9:27.08:0,27,352	0/0:12,0:12:3.01:0,3,271	0/1:14,0:13:65.33:65,0,186	./.	1/1:0,1:1:3.01:46,3,0	0/1:5,1:3:35.41:38,0,35	0/0:24,0:22:26.68:0,27,357	0/0:19,0:19:55.73:0,56,737	0/1:13,0:12:56.03:56,0,219	0/0:4,0:4:7.78:0,8,72
chr10	49551299	.	A	AAG	730.80	PASS	AB=0.912;AC=21;AF=0.420;AN=50;BaseQRankSum=1.653;DP=327;FS=0.000;HRun=0;HaplotypeScore=65.7624;InbreedingCoeff=0.2445;MQ=53.55;MQ0=12;MQRankSum=-1.757;QD=3.71;ReadPosRankSum=-0.379;VQSLOD=1.7093;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,1:18:3.81:133,4,0	1/1:8,1:9:8.97:87,9,0	./.	./.	0/0:19,0:18:2.92:0,3,32	0/0:5,0:5:2.94:0,3,18	./.	1/1:32,0:26:4.80:23,5,0	0/0:2,0:2:2.80:0,3,13	0/0:7,0:7:1.24:0,1,30	0/0:6,0:8:5.85:0,6,46	0/0:3,0:3:1.30:0,1,18	0/0:4,0:4:8.64:0,9,62	1/1:14,1:15:8.99:92,9,0	1/1:15,0:13:3:25,3,0	0/1:11,1:12:31.83:32,0,87	0/0:8,0:10:1.65:0,2,110	0/1:16,3:17:6.55:216,0,7	1/1:12,0:12:6.49:42,6,0	1/1:8,0:8:3:26,3,0	0/1:12,0:11:0:0,0,0	0/1:7,0:9:34.76:100,0,35	0/0:2,0:2:2.98:0,3,22	0/1:8,0:8:5.08:5,0,7	0/0:14,0:13:3.48:0,3,34	0/0:7,0:7:2.95:0,3,19	1/1:24,0:23:11.01:94,11,0	0/0:4,0:4:2.84:0,3,14
chr10	49551402	.	T	TA	6595.78	PASS	AB=0.559;AC=35;AF=0.625;AN=56;BaseQRankSum=-8.794;DP=531;FS=5.424;HRun=11;HaplotypeScore=58.8081;InbreedingCoeff=0.9132;MQ=73.76;MQ0=1;MQRankSum=-3.577;QD=19.69;ReadPosRankSum=-1.683;VQSLOD=5.3922;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,18:23:38.81:365,39,0	1/1:3,5:8:15.03:152,15,0	0/0:22,1:17:26.39:0,26,185	0/0:22,0:20:15.23:0,15,140	0/1:4,15:19:7.38:295,0,7	0/0:25,0:25:56.74:0,57,439	0/0:25,0:26:64.66:0,65,480	1/1:7,26:33:71.92:678,72,0	0/0:15,0:15:38.79:0,39,297	1/1:5,13:19:41.88:391,42,0	1/1:3,11:14:24.01:234,24,0	0/0:18,0:18:41.82:0,42,323	0/0:15,0:15:41.84:0,42,325	1/1:4,12:16:15.84:342,16,0	1/1:2,13:15:9.83:281,10,0	1/1:2,11:13:27.05:274,27,0	1/1:2,22:24:33.92:525,34,0	1/1:2,20:22:30.83:484,31,0	1/1:3,11:14:27.60:318,28,0	1/1:2,15:17:39.01:383,39,0	1/1:3,13:16:27.05:274,27,0	0/0:13,0:13:26.75:0,27,196	0/0:14,0:15:37.87:0,38,280	0/0:20,0:22:51.80:0,52,373	1/1:2,19:21:21.95:456,22,0	1/1:6,14:20:39.08:396,39,0	1/1:3,22:26:47.92:466,48,0	1/1:4,10:14:9.84:281,10,0
chr10	49551774	.	C	CAGAGAGAGAGAGAGAG	21512.69	PASS	AB=0.991;AC=52;AF=0.929;AN=56;BaseQRankSum=-1.244;DP=673;FS=5.970;HRun=0;HaplotypeScore=244.4801;InbreedingCoeff=0.3445;MQ=71.37;MQ0=7;MQRankSum=-4.697;QD=33.25;ReadPosRankSum=-0.083;VQSLOD=3.4262;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:38.15:0,38,2132	1/1:10,2:12:18.06:1089,18,0	0/1:42,0:23:30.05:30,0,106	0/1:55,0:35:6.29:6,0,168	1/1:13,0:28:3.01:209,3,0	1/1:10,0:23:12.04:752,12,0	1/1:26,0:26:33.07:1137,33,0	1/1:38,0:36:66.16:1394,66,0	1/1:12,0:19:18.06:771,18,0	1/1:14,0:30:60.18:2531,60,0	1/1:15,0:27:12.04:754,12,0	1/1:13,15:32:24.08:1714,24,0	1/1:12,10:23:24.08:1445,24,0	1/1:7,0:20:6.02:416,6,0	1/1:15,12:31:15.05:1114,15,0	1/1:12,0:12:8.96:278,9,0	1/1:15,0:16:27.03:1027,27,0	1/1:11,0:11:11.95:382,12,0	1/1:25,0:25:48.32:1052,48,0	1/1:11,0:24:15.05:884,15,0	1/1:10,0:8:2.97:20,3,0	1/1:12,12:25:12.04:909,12,0	1/1:22,1:23:21.02:691,21,0	1/1:13,0:13:6.43:195,6,0	1/1:21,0:21:14.97:263,15,0	1/1:21,0:20:47.88:1267,48,0	1/1:22,0:21:29.96:839,30,0	1/1:9,1:9:11.99:345,12,0
chr10	49551879	.	A	AT	6395.47	PASS	AB=0.776;AC=35;AF=0.625;AN=56;BaseQRankSum=-6.868;DP=551;FS=0.384;HRun=12;HaplotypeScore=62.1664;InbreedingCoeff=0.6475;MQ=74.61;MQ0=0;MQRankSum=-2.745;QD=15.30;ReadPosRankSum=-0.825;VQSLOD=5.3714;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:41.72:0,42,306	0/1:1,8:9:0.88:154,0,1	0/1:17,0:16:23.11:23,0,102	0/0:9,0:10:3.66:0,4,35	1/1:10,23:34:57.47:571,57,0	0/0:21,0:21:46.84:0,47,341	0/0:13,0:15:28.81:0,29,200	1/1:8,25:33:53.08:642,53,0	0/1:15,1:16:2.40:2,0,146	1/1:7,13:20:33.04:312,33,0	1/1:6,21:27:38.14:523,38,0	0/0:17,1:18:6.60:0,7,210	0/0:19,0:21:36.78:0,37,250	1/1:4,16:20:11.14:270,11,0	1/1:1,18:19:23.16:387,23,0	1/1:3,10:14:10.98:255,11,0	1/1:2,14:17:29.88:277,30,0	1/1:2,12:14:24.04:233,24,0	1/1:6,19:27:59.75:546,60,0	1/1:7,19:26:37.94:499,38,0	0/1:1,6:7:3.88:128,0,4	0/0:19,0:20:43.75:0,44,312	0/1:23,4:27:15.92:16,0,388	0/0:9,0:9:17.86:0,18,131	1/1:4,16:20:20.16:358,20,0	1/1:9,11:20:14.15:296,14,0	1/1:11,16:28:30.91:564,31,0	1/1:4,15:22:28.37:338,28,0
chr10	49553981	.	TG	T	14860.19	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=4.492;DP=603;FS=4.789;HRun=6;HaplotypeScore=64.8964;InbreedingCoeff=0.9973;MQ=85.27;MQ0=0;MQRankSum=-4.005;QD=28.31;ReadPosRankSum=3.454;VQSLOD=5.6784;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,102,1293	1/1:0,8:8:21.01:213,21,0	0/0:22,0:22:44.62:0,45,539	0/0:17,0:17:27.23:0,27,323	1/1:2,25:27:72.12:750,72,0	1/1:1,16:17:45.11:483,45,0	1/1:2,18:20:54.13:580,54,0	1/1:5,28:33:81.18:855,81,0	1/1:1,19:20:42.11:451,42,0	1/1:2,29:31:84.15:882,84,0	1/1:4,22:26:66.12:696,66,0	1/1:0,12:12:36.09:387,36,0	1/1:1,20:21:57.14:612,57,0	1/1:0,19:19:51.12:540,51,0	1/1:1,22:23:60.15:644,60,0	1/1:0,18:18:51.13:548,51,0	1/1:0,15:15:45.11:483,45,0	1/1:0,22:22:60.15:644,60,0	1/1:2,22:24:66.15:701,66,0	1/1:1,27:28:81.20:870,81,0	1/1:0,10:10:27.07:290,27,0	1/1:0,19:19:54.10:568,54,0	1/1:0,23:23:63.16:677,63,0	1/1:0,35:35:90.23:967,90,0	1/1:0,14:14:33.08:355,33,0	1/1:3,19:22:56.93:593,57,0	1/1:2,25:27:74:778,74,0	1/1:2,9:11:27.07:290,27,0
chr10	49556895	.	G	GT	13003.30	PASS	AB=0.930;AC=54;AF=0.964;AN=56;BaseQRankSum=-6.439;DP=675;FS=0.971;HRun=2;HaplotypeScore=119.8387;InbreedingCoeff=-0.0372;MQ=89.54;MQ0=0;MQRankSum=-5.888;QD=19.26;ReadPosRankSum=3.045;VQSLOD=5.0784;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:45,0:45:99:913,113,0	1/1:13,0:13:29.90:235,30,0	0/1:25,2:27:99:155,0,290	0/1:24,2:26:45.62:228,0,46	1/1:20,0:20:59.81:469,60,0	1/1:28,0:28:80.74:635,81,0	1/1:23,0:23:56.73:427,57,0	1/1:30,0:30:83.37:614,83,0	1/1:19,0:19:53.80:414,54,0	1/1:25,0:25:68.21:468,68,0	1/1:19,0:19:41.87:332,42,0	1/1:21,0:21:50.80:389,51,0	1/1:31,0:31:86.73:682,87,0	1/1:21,0:21:44.85:359,45,0	1/1:24,0:24:56.81:445,57,0	1/1:20,0:20:50.81:395,51,0	1/1:44,0:44:99:895,114,0	1/1:22,0:22:53.88:440,54,0	1/1:27,0:27:74.27:522,74,0	1/1:22,0:22:62.80:496,63,0	1/1:26,0:26:71.72:550,72,0	1/1:17,0:17:41.86:330,42,0	1/1:18,0:18:44.82:353,45,0	1/1:27,0:27:71.77:562,72,0	1/1:21,0:21:59.75:455,60,0	1/1:27,0:27:77.31:555,77,0	1/1:25,0:25:65.80:520,66,0	1/1:7,0:7:20.94:166,21,0
chr10	49558288	.	A	AT	467.26	PASS	AB=0.718;AC=13;AF=0.241;AN=54;BaseQRankSum=7.422;DP=230;FS=4.151;HRun=0;HaplotypeScore=69.7198;InbreedingCoeff=0.4357;MQ=74.24;MQ0=1;MQRankSum=-7.012;QD=6.40;ReadPosRankSum=2.213;VQSLOD=3.3405;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:63.20:0,63,866	0/0:4,0:4:11.80:0,12,96	0/0:8,0:7:6.53:0,7,144	0/0:11,0:9:17.62:0,18,184	0/1:3,6:9:8.20:64,0,8	0/0:18,0:18:41.69:0,42,356	0/0:13,0:13:32.73:0,33,336	0/0:19,0:19:56.81:0,57,648	0/0:7,0:7:20.82:0,21,190	1/1:1,2:3:5.95:42,6,0	0/1:4,1:5:0.63:1,0,9	0/0:9,0:9:23.81:0,24,194	0/0:1,0:1:3:0,3,25	0/1:5,2:7:23.01:23,0,38	0/0:4,0:4:11.78:0,12,74	0/0:9,0:9:23.31:0,23,169	1/1:5,5:9:6.42:111,6,0	1/1:4,6:9:4.96:104,5,0	0/0:8,0:8:20.67:0,21,234	0/0:6,1:7:14.07:0,14,189	0/0:2,0:1:6.02:0,6,84	0/0:4,0:4:10.56:0,11,95	0/0:4,0:4:9.40:0,9,67	./.	1/1:5,11:16:20.82:181,21,0	0/1:3,2:5:18.86:29,0,19	0/0:8,0:8:22.77:0,23,160	0/1:4,4:8:2.59:67,0,3
chr10	49558289	.	A	AATAT	7614.35	PASS	AB=1.000;AC=45;AF=0.900;AN=50;BaseQRankSum=0.499;DP=257;FS=4.484;HRun=0;HaplotypeScore=66.6272;InbreedingCoeff=0.5267;MQ=72.77;MQ0=1;MQRankSum=-3.547;QD=35.42;ReadPosRankSum=-1.675;VQSLOD=3.6378;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:54.18:0,54,927	1/1:2,0:4:6.02:106,6,0	0/1:6,0:6:12.83:13,0,70	0/0:12,0:10:6.01:0,6,78	1/1:5,0:11:15.05:283,15,0	1/1:3,14:19:35.91:824,36,0	1/1:5,8:13:21.07:523,21,0	1/1:16,2:26:48.12:744,48,0	1/1:4,3:8:17.85:369,18,0	1/1:2,0:4:12.03:193,12,0	./.	1/1:2,8:10:24.08:584,24,0	1/1:0,1:1:3.01:76,3,0	1/1:5,0:7:12.04:225,12,0	1/1:3,0:5:8.90:121,9,0	1/1:1,7:8:18.06:394,18,0	1/1:7,0:11:24.08:412,24,0	1/1:7,0:12:24.08:419,24,0	1/1:2,4:8:18.04:305,18,0	1/1:4,1:7:6.02:128,6,0	./.	1/1:1,3:4:6.02:151,6,0	1/1:2,3:5:11.60:279,12,0	./.	1/1:8,0:19:36.11:637,36,0	1/1:3,0:5:9.02:134,9,0	1/1:3,0:11:24.08:389,24,0	1/1:4,0:8:18.06:306,18,0
chr10	49559138	.	TGTCGTGGTGG	T	9087	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=14.416;DP=692;FS=18.074;HRun=0;HaplotypeScore=205.8383;InbreedingCoeff=0.9755;MQ=80.57;MQ0=0;MQRankSum=-12.507;QD=66.82;ReadPosRankSum=-0.509;VQSLOD=2.9712;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,150,7770	0/0:10,0:10:30.09:0,30,1503	0/0:20,0:20:57.17:0,57,2542	0/0:23,0:23:66.09:0,66,2365	0/0:22,0:22:66.20:0,66,3194	0/0:17,0:17:51.14:0,51,2348	0/0:33,0:33:99:0,99,5328	1/1:0,19:19:54.05:1373,54,0	0/0:16,0:16:48.15:0,48,2247	0/0:25,0:25:75.26:0,75,3990	0/0:22,0:22:66.20:0,66,3283	0/0:33,0:33:99:0,99,5374	0/0:31,0:31:93.29:0,93,4629	0/0:35,0:35:99:0,105,5422	0/0:18,0:18:54.17:0,54,2750	1/1:1,27:28:38.22:1932,38,0	0/0:23,0:23:69.24:0,69,3690	0/0:40,0:40:99:0,117,6272	1/1:0,19:19:54.12:1583,54,0	1/1:0,26:26:57.19:1794,57,0	1/1:0,17:17:5.43:208,5,0	0/0:30,0:30:90.31:0,90,4411	0/0:22,0:22:66.23:0,66,3498	0/0:23,0:23:69.24:0,69,3785	0/0:25,0:25:75.23:0,75,3280	0/0:29,0:28:87.29:0,87,4481	1/1:0,27:27:62.89:2197,63,0	0/0:8,0:8:24.05:0,24,931
chr10	49559902	.	TCA	T	5657.21	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=3.743;DP=659;FS=17.275;HRun=0;HaplotypeScore=101.2566;InbreedingCoeff=0.9930;MQ=97.97;MQ0=1;MQRankSum=-5.671;QD=40.41;ReadPosRankSum=0.163;VQSLOD=5.0952;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:90.31:0,90,1629	0/0:8,0:8:21.07:0,21,385	0/0:33,0:33:86.94:0,87,1511	0/0:34,0:34:99:0,101,1749	0/0:30,0:30:87.30:0,87,1594	0/0:25,0:25:72.20:0,72,856	0/0:22,0:22:60.18:0,60,724	1/1:1,18:19:54.15:737,54,0	0/0:21,0:21:57.18:0,57,685	0/0:29,0:29:87.30:0,87,1579	0/0:21,0:21:63.22:0,63,1142	0/0:22,0:22:63.18:0,63,746	0/0:31,0:31:87.73:0,88,1040	0/0:21,0:21:63.22:0,63,1147	0/0:26,0:26:75.26:0,75,1374	1/1:0,18:18:54.18:774,54,0	0/0:24,0:24:66.23:0,66,1207	0/0:19,0:19:54.18:0,54,934	1/1:0,21:21:63.17:879,63,0	1/1:0,35:35:99:1419,99,0	1/1:1,24:24:66.22:946,66,0	0/0:20,0:20:57.18:0,57,694	0/0:28,0:28:78.24:0,78,952	0/0:29,0:29:84.22:0,84,1022	0/0:18,0:18:51.17:0,51,928	0/0:23,0:23:69.24:0,69,1262	1/1:0,22:22:63.14:902,63,0	0/0:5,0:5:12.04:0,12,220
chr10	49561895	.	A	AGG	2498.53	PASS	AB=0.606;AC=31;AF=0.554;AN=56;BaseQRankSum=-6.069;DP=576;FS=1.663;HRun=8;HaplotypeScore=118.1029;InbreedingCoeff=0.7835;MQ=94.93;MQ0=1;MQRankSum=-2.721;QD=8.80;ReadPosRankSum=-0.666;VQSLOD=0.2793;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:87.15:0,87,926	1/1:2,0:5:10.48:51,10,0	0/0:42,0:41:38.62:0,39,679	0/0:26,0:26:35.66:0,36,382	1/1:3,1:14:20.41:163,20,0	0/0:13,0:13:18.09:0,18,50	0/0:34,0:34:45.65:0,46,130	1/1:6,0:22:38.40:156,38,0	0/0:21,0:21:27.05:0,27,83	1/1:4,2:11:21.03:234,21,0	1/1:4,1:11:9:80,9,0	0/0:29,0:28:45.38:0,45,124	0/0:26,0:26:24.99:0,25,81	1/1:9,2:25:27.05:276,27,0	1/1:2,0:28:52.31:180,52,0	1/1:2,1:14:26.31:286,26,0	1/1:4,3:20:24.05:267,24,0	1/1:2,0:12:14.98:143,15,0	0/1:6,0:17:34.63:89,0,35	0/1:6,0:14:2.36:83,0,2	0/1:8,0:30:11.24:114,0,11	0/0:20,0:19:29.21:0,29,87	0/0:12,0:12:19.60:0,20,54	0/0:36,0:36:50.71:0,51,140	1/1:3,4:16:15.03:181,15,0	1/1:4,1:10:11.95:98,12,0	1/1:2,0:28:52.33:180,52,0	1/1:2,1:6:12.02:134,12,0
chr10	49561902	.	GGT	G	1001.61	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=8.354;DP=584;FS=16.604;HRun=0;HaplotypeScore=120.1981;InbreedingCoeff=0.9876;MQ=89.06;MQ0=1;MQRankSum=-1.007;QD=5.30;ReadPosRankSum=6.576;VQSLOD=1.5984;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:93.24:0,93,1432	0/0:6,0:6:12:0,12,111	0/0:37,0:36:83.92:0,84,1231	0/0:21,0:21:42.71:0,43,649	0/0:14,0:14:28.90:0,29,268	1/1:14,0:14:25.02:95,25,0	1/1:31,1:32:56.29:211,56,0	0/0:24,0:24:63.02:0,63,628	1/1:18,2:20:32.66:164,33,0	0/0:13,0:13:34.46:0,34,298	0/0:8,0:8:11.77:0,12,112	1/1:28,0:27:55.47:178,55,0	1/1:30,0:30:41.50:131,42,0	0/0:22,0:22:41.92:0,42,395	0/0:31,0:31:78.02:0,78,803	0/0:14,0:14:29.94:0,30,277	0/0:20,0:20:32.88:0,33,313	0/0:15,0:15:29.94:0,30,282	0/0:18,0:18:35.02:0,35,451	0/0:14,0:14:39.51:0,40,399	0/0:33,0:32:86.89:0,87,949	1/1:17,1:17:36.53:160,37,0	1/1:13,0:13:23.72:76,24,0	1/1:34,0:34:60.65:194,61,0	0/0:21,0:21:33.01:0,33,302	0/0:11,0:11:21.93:0,22,191	0/0:29,0:29:69:0,69,750	0/0:11,0:11:31.62:0,32,310
chr10	49561903	.	GT	G	6091.37	PASS	AB=0.958;AC=19;AF=0.339;AN=56;BaseQRankSum=-3.489;DP=575;FS=20.411;HRun=1;HaplotypeScore=91.8479;InbreedingCoeff=0.7752;MQ=89.00;MQ0=1;MQRankSum=-1.970;QD=27.07;ReadPosRankSum=5.820;VQSLOD=3.3793;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:96.23:0,96,1240	0/1:5,0:5:11.08:11,0,49	0/0:36,0:35:77.12:0,77,1123	0/0:21,0:21:51.72:0,52,627	0/0:14,0:14:21.62:0,22,160	1/1:0,14:14:33.10:441,33,0	1/1:1,31:32:74.99:1015,75,0	0/0:21,0:21:53.45:0,53,395	1/1:2,17:19:41.61:525,42,0	0/0:13,0:13:19.01:0,19,196	0/0:8,0:8:11.60:0,12,71	1/1:0,28:27:75.25:1042,75,0	1/1:0,30:30:56.90:788,57,0	0/0:21,0:21:38.06:0,38,243	0/0:31,0:31:75.47:0,75,463	0/0:13,0:13:26.68:0,27,163	0/0:20,0:20:31.82:0,32,202	0/0:16,0:16:31.75:0,32,227	0/1:18,0:18:9.56:10,0,259	0/1:12,2:14:4.26:4,0,192	0/0:33,0:32:84.37:0,84,591	1/1:1,17:17:47.89:636,48,0	1/1:0,13:13:33.06:455,33,0	1/1:0,34:34:84.28:1164,84,0	0/0:20,0:20:32.55:0,33,233	0/0:11,0:11:7.56:0,8,128	0/0:28,0:28:66.04:0,66,370	0/0:11,0:11:18.20:0,18,209
chr10	49563166	.	AGAAACTCG	A	12212.69	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=16.101;DP=650;FS=4.661;HRun=0;HaplotypeScore=175.7316;InbreedingCoeff=0.9967;MQ=86.61;MQ0=0;MQRankSum=-16.803;QD=64.28;ReadPosRankSum=2.782;VQSLOD=4.9419;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:93.29:0,93,3934	0/0:10,0:10:30.10:0,30,1272	0/0:27,0:27:78.27:0,78,3019	0/0:22,0:22:53.21:0,53,2034	1/1:2,33:35:75.26:1984,75,0	0/0:27,0:27:81.26:0,81,3277	0/0:12,0:12:36.12:0,36,1583	0/0:35,0:34:93.32:0,93,3845	0/0:27,0:27:72.25:0,72,3077	1/1:4,22:26:63.22:1762,63,0	1/1:4,24:28:66.23:1802,66,0	0/0:20,0:20:60.17:0,60,2347	0/0:20,0:20:57.20:0,57,2444	1/1:1,15:16:39.13:1090,39,0	0/0:25,0:25:72.23:0,72,3060	0/0:34,0:34:93.30:0,93,3734	1/1:3,10:13:30.10:792,30,0	1/1:4,8:12:15.05:420,15,0	0/0:23,0:23:66.21:0,66,2597	0/0:28,0:28:75.26:0,75,3141	0/0:24,0:24:66.23:0,66,2856	0/0:21,0:21:57.20:0,57,2370	0/0:16,0:16:48.16:0,48,2033	0/0:26,0:26:72.25:0,72,3141	1/1:2,18:20:45.15:1254,45,0	1/1:2,31:33:93.32:2521,93,0	0/0:32,0:32:90.31:0,90,3667	1/1:0,7:7:21.07:587,21,0
chr10	49563828	.	C	CT	956.96	PASS	AB=0.970;AC=20;AF=0.357;AN=56;BaseQRankSum=-1.053;DP=459;FS=14.776;HRun=14;HaplotypeScore=50.6825;InbreedingCoeff=0.6377;MQ=50.62;MQ0=29;MQRankSum=1.743;QD=4.51;ReadPosRankSum=0.033;VQSLOD=0.2320;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:32:23.68:0,24,321	1/1:6,0:7:5.14:31,5,0	0/0:22,0:5:5.30:0,5,30	0/1:16,0:4:0.87:1,0,18	0/0:14,0:12:25.48:0,25,181	0/0:6,0:5:8.94:0,9,69	0/0:10,0:10:20.78:0,21,161	1/1:24,7:29:12.85:106,13,0	0/0:13,0:12:17.78:0,18,127	0/0:17,0:14:29.84:0,30,227	0/0:15,0:15:16.88:0,17,156	0/0:12,0:9:14.44:0,14,97	0/1:3,0:2:0:0,0,0	0/0:8,0:8:8.78:0,9,60	1/1:14,0:14:3.17:13,3,0	1/1:16,0:14:15.27:95,15,0	0/0:18,0:16:20.32:0,20,143	0/1:25,2:27:60.45:60,0,223	1/1:21,10:29:23.93:222,24,0	1/1:7,18:25:33.44:300,33,0	1/1:1,5:6:6.48:62,6,0	0/0:14,0:14:29.79:0,30,221	0/1:18,1:18:17.22:17,0,209	0/0:13,0:13:20.88:0,21,160	0/0:19,0:18:27.18:0,27,197	0/0:16,1:14:2.34:0,2,192	1/1:13,3:15:26.81:236,27,0	0/0:13,0:13:23.73:0,24,180
chr10	49566713	.	C	CT	5105.28	PASS	AB=0.607;AC=26;AF=0.464;AN=56;BaseQRankSum=-10.369;DP=699;FS=5.899;HRun=11;HaplotypeScore=78.5953;InbreedingCoeff=0.7991;MQ=69.92;MQ0=0;MQRankSum=0.988;QD=14.93;ReadPosRankSum=0.129;VQSLOD=5.2092;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:38,2:40:64.93:0,65,675	0/0:7,0:9:16.57:0,17,109	0/0:35,0:26:34.39:0,34,226	0/0:12,0:8:0.37:0,0,14	0/1:7,16:23:7.11:354,0,7	0/0:20,0:21:30.56:0,31,364	0/0:29,0:32:66.82:0,67,471	1/1:12,16:28:41.53:364,42,0	0/0:22,1:24:28.30:0,28,384	1/1:13,20:34:43.28:482,43,0	1/1:5,15:21:8.84:284,9,0	0/0:23,0:23:54.15:0,54,422	0/0:34,0:37:75.66:0,76,566	1/1:9,17:26:36.07:365,36,0	0/0:28,0:30:64.71:0,65,491	0/0:17,1:18:20.34:0,20,337	1/1:9,29:39:28.10:651,28,0	1/1:7,14:22:15.68:326,16,0	1/1:10,14:24:16.60:369,17,0	0/1:5,12:20:25.42:207,0,25	1/1:5,15:20:9.83:281,10,0	0/0:23,0:23:44.77:0,45,348	0/0:24,0:24:53.74:0,54,414	0/0:29,0:29:62.67:0,63,484	1/1:7,20:27:52.82:522,53,0	1/1:5,16:21:21.81:382,22,0	1/1:7,22:29:45.09:457,45,0	1/1:2,6:8:6.01:61,6,0
chr10	49568092	.	CTGTT	C	14789.35	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=19.532;DP=739;FS=0.000;HRun=0;HaplotypeScore=146.4544;InbreedingCoeff=0.9761;MQ=74.05;MQ0=1;MQRankSum=-6.702;QD=42.13;ReadPosRankSum=0.237;VQSLOD=4.5759;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,144,3519	0/0:12,0:12:36.12:0,36,943	0/0:20,0:19:45.15:0,45,974	0/0:16,0:16:48.10:0,48,1059	1/1:5,30:35:84.14:1345,84,0	0/0:29,0:29:87.30:0,87,2233	0/0:20,0:20:51.17:0,51,1188	1/1:2,23:25:69.18:1103,69,0	0/0:24,0:24:69.24:0,69,1778	1/1:1,37:38:99:1927,108,0	1/1:1,20:21:53.92:835,54,0	0/0:42,0:42:99:0,120,2969	0/0:40,0:40:99:0,108,2671	1/1:2,25:27:57.13:992,57,0	0/0:39,0:39:99:0,108,2534	0/0:33,0:33:93.32:0,93,2385	1/1:0,21:21:57.20:1048,57,0	1/1:0,15:15:33.04:570,33,0	1/1:2,24:26:69.22:1179,69,0	1/1:1,36:37:99:1475,102,0	1/1:2,27:29:60.21:1087,60,0	0/0:17,0:17:51.17:0,51,1270	0/0:26,0:26:69.22:0,69,1644	0/0:21,0:21:63.15:0,63,1526	1/1:0,19:18:42.08:719,42,0	1/1:1,25:26:72.21:1243,72,0	1/1:6,24:29:66.23:1213,66,0	1/1:1,1:2:3.01:55,3,0
chr10	49569554	.	ACT	A	3562.96	PASS	AB=0.982;AC=25;AF=0.446;AN=56;BaseQRankSum=12.996;DP=904;FS=20.980;HRun=0;HaplotypeScore=195.8349;InbreedingCoeff=0.5444;MQ=51.95;MQ0=20;MQRankSum=3.976;QD=7.18;ReadPosRankSum=0.975;VQSLOD=1.7263;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:53:99:0,119,2456	0/0:8,0:8:15.52:0,16,264	0/0:34,1:11:10.12:0,10,375	0/0:26,0:10:13.74:0,14,307	1/1:20,0:20:28.18:139,28,0	0/0:27,0:26:38.90:0,39,638	0/0:40,0:40:81.88:0,82,1699	0/1:28,0:26:44.34:193,0,44	0/0:42,0:42:52.37:0,52,1139	1/1:33,0:32:46.02:326,46,0	1/1:17,0:16:19.73:103,20,0	0/1:30,0:29:21.06:21,0,784	0/1:39,0:39:6.10:6,0,844	1/1:44,1:43:60.65:373,61,0	0/0:44,0:44:71.85:0,72,1252	0/0:45,0:43:25.44:0,25,1470	1/1:35,0:36:55.42:383,55,0	0/1:12,0:12:2.19:130,0,2	0/1:16,1:14:3.94:147,0,4	0/1:37,3:40:30.67:210,0,31	1/1:96,1:96:99:820,124,0	0/0:17,0:17:33.11:0,33,637	0/0:28,1:29:34.22:0,34,888	0/0:40,0:39:89.81:0,90,1610	1/1:26,1:27:31.26:219,31,0	1/1:27,0:25:48.03:281,48,0	0/1:13,0:13:38.88:96,0,39	1/1:15,0:14:15.50:117,15,0
chr10	49569556	.	TCA	T	8827.16	PASS	AB=0.646;AC=26;AF=0.464;AN=56;BaseQRankSum=7.467;DP=914;FS=10.108;HRun=0;HaplotypeScore=179.5710;InbreedingCoeff=0.8548;MQ=51.96;MQ0=23;MQRankSum=3.017;QD=20.53;ReadPosRankSum=1.324;VQSLOD=4.4207;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,128,2175	0/0:8,0:8:17.09:0,17,257	0/0:39,0:11:21.35:0,21,337	0/0:28,0:10:23.44:0,23,346	1/1:4,16:20:30.10:382,30,0	0/0:25,1:25:30.04:0,30,494	0/0:40,2:42:58.11:0,58,1458	1/1:8,18:24:48.15:607,48,0	0/0:42,0:42:63.20:0,63,1021	1/1:12,23:34:58.08:764,58,0	0/1:5,12:16:2.24:208,0,2	0/0:31,1:31:53.75:0,54,781	0/0:39,0:39:51.09:0,51,793	1/1:17,31:46:34.72:805,35,0	0/0:44,0:44:64.71:0,65,1028	0/0:43,2:43:66.81:0,67,1287	1/1:6,28:35:41.96:802,42,0	0/1:7,5:12:29.45:197,0,29	1/1:8,10:15:29.58:371,30,0	1/1:14,26:40:53.79:736,54,0	1/1:20,77:96:99:2242,178,0	0/0:15,0:15:32.80:0,33,548	0/0:27,1:28:48.16:0,48,800	0/0:40,0:39:87.24:0,87,1395	1/1:11,16:27:17.46:440,17,0	1/1:8,19:25:42.51:688,43,0	1/1:6,7:13:20.98:246,21,0	1/1:3,12:14:2.94:338,3,0
chr10	49569568	.	ACT	A	2565.91	PASS	AB=0.986;AC=18;AF=0.321;AN=56;BaseQRankSum=16.507;DP=947;FS=20.214;HRun=0;HaplotypeScore=189.3903;InbreedingCoeff=0.1709;MQ=52.77;MQ0=22;MQRankSum=-2.824;QD=5.93;ReadPosRankSum=6.280;VQSLOD=1.4022;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,128,2445	0/0:11,0:11:23.93:0,24,360	0/0:55,0:13:22.01:0,22,358	0/0:47,0:12:27.07:0,27,386	0/1:19,0:19:35.70:109,0,36	0/0:23,0:22:33.02:0,33,571	0/0:43,0:43:99:0,103,1897	0/1:35,0:35:99:141,0,359	0/0:43,0:43:83.70:0,84,1352	0/1:33,0:33:99:175,0,129	0/1:17,1:17:18.67:58,0,19	0/0:30,0:29:38.96:0,39,932	0/0:37,0:37:49.90:0,50,1015	0/1:48,0:46:56:249,0,56	0/0:48,0:48:60.83:0,61,1231	0/0:40,0:38:41.63:0,42,1479	1/1:32,1:33:45.37:352,45,0	0/1:11,0:11:60.17:60,0,67	0/1:18,0:15:64.30:128,0,64	0/1:36,2:38:34.19:205,0,34	0/1:99,1:100:99:610,0,187	0/0:14,0:14:36.10:0,36,658	0/0:27,0:27:54.17:0,54,994	0/0:42,0:41:93.28:0,93,1686	1/1:23,0:23:17.18:184,17,0	0/1:30,1:30:99:232,0,140	1/1:11,0:11:11.35:76,11,0	1/1:14,1:14:17.34:170,17,0
chr10	49569732	.	GCA	G	4417.69	PASS	AB=0.781;AC=33;AF=0.589;AN=56;BaseQRankSum=-4.518;DP=943;FS=0.855;HRun=0;HaplotypeScore=186.1290;InbreedingCoeff=0.4795;MQ=51.76;MQ0=23;MQRankSum=-0.610;QD=7.44;ReadPosRankSum=3.074;VQSLOD=4.6177;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:45,1:47:7.08:7,0,795	0/1:8,0:20:16.01:52,0,16	0/0:57,0:16:3.01:0,3,40	0/0:61,0:11:3.01:0,3,35	1/1:13,12:26:20.87:205,21,0	0/1:13,1:28:12.29:12,0,137	0/0:10,1:38:58.34:0,58,536	1/1:29,1:43:2.77:131,3,0	0/0:24,0:43:43.77:0,44,382	1/1:21,8:29:14.35:370,14,0	1/1:10,5:17:23.71:223,24,0	0/0:15,0:31:32.04:0,32,286	0/0:13,0:35:36.21:0,36,314	0/1:10,20:32:28.53:539,0,29	1/1:14,0:44:19.32:152,19,0	1/1:10,16:30:44.45:427,44,0	1/1:19,11:36:24.57:528,25,0	1/1:9,13:23:0.60:301,1,0	1/1:15,0:20:15.82:82,16,0	1/1:13,0:26:10.77:151,11,0	1/1:47,0:61:0.12:227,0,0	0/0:14,0:27:9.89:0,10,107	0/0:5,0:13:9.29:0,9,80	0/0:20,0:43:43.05:0,43,370	1/1:23,9:35:34.77:480,35,0	1/1:24,13:38:16.82:316,17,0	1/1:10,0:20:18.29:86,18,0	0/1:9,4:11:50.42:128,0,50
chr10	49570272	.	CCCAGAGAGAGAGAGAG	C	310.12	PASS	AB=1.000;AC=18;AF=0.409;AN=44;BaseQRankSum=-4.309;DP=270;FS=29.898;HRun=0;HaplotypeScore=60.7975;InbreedingCoeff=0.2213;MQ=28.91;MQ0=10;MQRankSum=-3.551;QD=2.85;ReadPosRankSum=-2.062;VQSLOD=-0.3890;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:7:3.01:0,3,153	0/0:8,0:8:5.71:0,6,161	0/0:13,0:1:3.01:0,3,38	./.	./.	./.	0/1:7,0:7:0:0,0,0	0/1:7,0:7:19.67:52,0,20	1/1:5,0:6:2.22:7,2,0	0/0:8,0:8:10.04:0,10,800	0/1:13,0:13:0.21:0,0,0	1/1:9,0:7:2.71:18,3,0	0/0:9,0:8:0.71:0,1,2	0/0:6,0:6:3.01:0,3,124	0/0:17,0:17:5.98:0,6,94	0/0:15,0:14:3.68:0,4,110	1/1:1,0:1:2.96:19,3,0	0/1:6,0:6:14.70:15,0,138	1/1:5,0:5:11.55:79,12,0	0/0:6,0:8:0:0,0,0	./.	1/1:15,1:17:0.10:0,0,0	./.	./.	0/1:9,0:9:0:0,0,0	0/1:23,0:22:99:149,0,1098	1/1:0,0:6:3.01:86,3,0	0/0:3,0:2:6.01:0,6,158
chr10	49575011	.	AT	A	11176.60	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=13.898;DP=628;FS=9.105;HRun=7;HaplotypeScore=71.3936;InbreedingCoeff=0.9987;MQ=74.19;MQ0=0;MQRankSum=-3.028;QD=26.61;ReadPosRankSum=2.288;VQSLOD=5.4562;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:75.22:0,75,929	1/1:0,16:16:36.08:367,36,0	0/0:8,0:8:18.06:0,18,219	0/0:14,0:14:33.10:0,33,411	1/1:1,32:33:96.22:979,96,0	0/0:20,0:20:60.19:0,60,755	0/0:28,0:28:81.22:0,81,981	1/1:1,29:30:87.19:887,87,0	0/0:14,0:14:33.11:0,33,414	1/1:5,21:26:63.12:629,63,0	1/1:2,14:16:39.09:397,39,0	0/0:20,0:20:60.16:0,60,738	0/0:29,0:29:72.23:0,72,904	1/1:6,28:34:84.19:857,84,0	1/1:3,28:31:81.18:826,81,0	1/1:4,15:19:42.09:429,42,0	1/1:1,26:27:72.16:735,72,0	1/1:0,18:18:54.12:551,54,0	1/1:2,21:23:63.11:634,63,0	1/1:2,16:18:48.11:489,48,0	1/1:1,16:17:45.10:459,45,0	0/0:15,0:15:42.13:0,42,528	0/0:13,0:13:33.10:0,33,411	0/0:19,0:19:51.14:0,51,617	1/1:4,29:33:81.18:826,81,0	1/1:1,26:27:78.18:796,78,0	1/1:4,32:36:90.20:918,90,0	1/1:1,15:15:39.09:398,39,0
chr10	49575536	.	AAC	A	538.86	PASS	AB=0.861;AC=14;AF=0.292;AN=48;BaseQRankSum=2.719;DP=488;FS=44.384;HRun=0;HaplotypeScore=86.9989;InbreedingCoeff=0.2231;MQ=61.04;MQ0=24;MQRankSum=3.075;QD=3.19;ReadPosRankSum=1.737;VQSLOD=0.2458;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:16,8:24:47.48:174,0,47	0/0:11,0:9:2.97:0,3,20	./.	./.	0/0:15,0:15:3:0,3,25	0/1:6,1:7:7.45:25,0,7	0/1:28,8:31:10.57:148,0,11	0/0:20,0:19:28.32:0,28,175	1/1:9,0:10:2.84:14,3,0	0/0:16,0:16:1.39:0,1,126	0/0:13,0:13:4.54:0,5,27	1/1:11,10:17:2.62:169,3,0	1/1:15,4:17:9.02:94,9,0	1/1:20,0:19:1.75:19,2,0	0/1:22,0:21:4.54:5,0,54	0/0:15,0:14:15:0,15,155	0/0:15,0:15:5.14:0,5,44	0/0:19,0:18:11.85:0,12,156	./.	0/0:12,0:12:3:0,3,25	0/0:31,0:27:5.75:0,6,48	./.	1/1:7,2:9:2.99:24,3,0	0/0:18,0:37:5.24:0,5,21	0/0:10,0:10:6.63:0,7,93	0/0:17,0:17:15.71:0,16,112	0/0:10,0:10:1.52:0,2,9	0/0:3,0:3:7.91:0,8,36
chr10	49575575	.	ACGCACGCACGCACGCACGCACGCACGCACGCACG	A	2683.17	PASS	AB=0.944;AC=31;AF=0.620;AN=50;BaseQRankSum=0.905;DP=432;FS=5.840;HRun=0;HaplotypeScore=240.2277;InbreedingCoeff=0.3446;MQ=40.11;MQ0=34;MQRankSum=-3.617;QD=9.72;ReadPosRankSum=-3.529;VQSLOD=1.7788;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:21:2.65:3,0,869	1/1:6,0:5:0.47:1,0,0	./.	./.	1/1:12,0:10:2.52:23,3,0	0/0:12,0:12:14.94:0,15,989	0/0:33,0:25:12.57:0,13,1360	1/1:23,0:20:13.21:43,13,0	0/0:14,0:12:14.79:0,15,1328	0/1:16,0:15:25.61:207,0,26	1/1:9,0:9:3.36:20,3,0	0/0:27,0:21:28.15:0,28,2827	0/0:17,0:13:17.21:0,17,2012	1/1:13,0:16:8.22:191,8,0	1/1:12,0:14:7.98:520,8,0	0/1:11,0:10:13.12:127,0,13	1/1:17,0:18:13.88:535,14,0	0/1:14,0:16:41.59:42,0,85	1/1:5,8:12:24.44:661,24,0	1/1:2,13:16:2.94:18,3,0	1/1:30,0:26:2.65:25,3,0	./.	0/0:3,0:3:0.47:0,0,1	0/0:35,0:31:12.04:0,12,1011	0/1:11,0:11:16.16:17,0,16	1/1:7,10:18:1.09:260,1,0	1/1:3,0:11:2.91:123,3,0	1/1:4,0:4:7.41:30,7,0
chr10	49575579	.	ACG	A	307.16	PASS	AB=0.985;AC=20;AF=0.435;AN=46;BaseQRankSum=4.495;DP=412;FS=9.889;HRun=0;HaplotypeScore=106.9539;InbreedingCoeff=0.1813;MQ=39.78;MQ0=33;MQRankSum=-5.046;QD=1.57;ReadPosRankSum=-2.694;VQSLOD=0.7820;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:19:29.82:0,30,322	0/1:7,0:5:0:0,0,0	./.	./.	./.	0/0:13,0:13:18.28:0,18,265	0/0:32,0:24:32.56:0,33,451	0/0:23,0:20:7.14:0,7,174	0/0:14,0:12:14.50:0,14,249	0/1:16,0:14:67.76:68,0,136	1/1:10,0:9:3.37:19,3,0	0/0:25,0:19:36.08:0,36,566	0/0:17,0:13:23.97:0,24,382	1/1:15,0:15:8.90:78,9,0	0/1:13,0:14:12.33:16,0,12	0/1:12,0:11:11.11:11,0,37	1/1:16,0:16:4.32:84,4,0	0/1:16,0:15:43.57:46,0,44	0/1:12,0:11:28.15:28,0,52	1/1:15,0:15:2.94:18,3,0	1/1:30,0:23:3.42:26,3,0	./.	./.	0/0:36,0:32:12.04:0,12,198	0/0:14,0:13:5.47:0,5,26	0/1:17,0:17:19.31:19,0,27	0/1:11,0:11:13.62:14,0,24	1/1:4,0:4:7.56:31,8,0
chr10	49579359	.	CTGTGTGTGTGTGTGTGTGTGTGTGTG	C	3859.47	PASS	AB=0.771;AC=5;AF=0.089;AN=56;BaseQRankSum=6.292;DP=628;FS=4.438;HRun=0;HaplotypeScore=360.7674;InbreedingCoeff=0.7140;MQ=69.12;MQ0=5;MQRankSum=-6.752;QD=56.76;ReadPosRankSum=1.973;VQSLOD=1.6549;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:65.88:0,66,5939	1/1:8,2:11:12.04:791,12,0	0/0:28,0:20:5.38:0,5,238	0/0:31,0:25:24.04:0,24,975	0/0:11,0:11:18.02:0,18,1494	0/0:20,0:18:39.13:0,39,3655	0/0:25,0:26:35.98:0,36,3247	0/0:37,0:35:44.16:0,44,2079	0/0:23,0:24:40.35:0,40,3834	0/0:11,0:11:24.08:0,24,1843	0/0:19,0:20:26.90:0,27,2959	0/0:20,0:20:48.16:0,48,3911	0/0:18,0:18:30.89:0,31,3499	0/0:15,0:15:29.59:0,30,2822	0/1:19,8:27:99:1398,0,305	1/1:20,9:30:27.09:1671,27,0	0/0:30,0:30:48.14:0,48,4794	0/0:19,0:20:34.36:0,34,3235	0/0:21,0:21:42.14:0,42,2820	0/0:17,0:19:26.99:0,27,2631	0/0:44,0:45:72.24:0,72,6816	0/0:12,0:16:24.08:0,24,1787	0/0:12,0:15:24.08:0,24,2575	0/0:23,0:25:60.18:0,60,4992	0/0:17,0:17:27.04:0,27,2423	0/0:17,0:17:27.09:0,27,2368	0/0:18,0:21:47.65:0,48,4048	0/0:7,0:7:15.05:0,15,1445
chr10	49579987	.	G	GAGGGAGGAAGGA	8004.62	PASS	AB=0.980;AC=24;AF=0.429;AN=56;BaseQRankSum=7.094;DP=674;FS=7.189;HRun=0;HaplotypeScore=273.9272;InbreedingCoeff=-0.4668;MQ=55.19;MQ0=5;MQRankSum=-7.052;QD=15.19;ReadPosRankSum=-1.393;VQSLOD=2.2407;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:75.08:0,75,1768	0/0:8,0:8:12:0,12,276	0/0:29,0:18:20.91:0,21,215	0/0:24,0:21:23.33:0,23,200	0/1:23,0:23:83.38:278,0,83	0/1:38,0:36:86.96:758,0,87	0/1:28,0:28:48.01:528,0,48	0/1:26,0:24:91.58:145,0,92	0/1:29,0:29:1.46:406,0,1	0/1:32,0:31:71.86:458,0,72	0/1:19,0:19:98.26:189,0,98	0/1:22,0:22:99:595,0,123	0/1:20,0:20:8.46:647,0,8	0/1:44,0:44:61.61:808,0,62	0/0:19,0:19:29.59:0,30,767	0/0:39,0:39:47.09:0,47,1275	0/1:30,0:30:99:162,0,107	0/1:22,0:22:96.90:279,0,97	0/1:18,0:18:73.71:165,0,74	0/1:18,0:18:86.21:185,0,86	0/1:26,0:25:99:206,0,112	0/1:10,5:21:99:180,0,120	0/1:16,0:16:36.93:606,0,37	0/1:17,0:18:99:432,0,116	1/1:18,0:18:4.28:374,4,0	0/1:29,0:29:95.91:427,0,96	0/1:24,0:24:83.93:122,0,84	1/1:6,0:6:3.30:54,3,0
chr10	49579991	.	GAGGAAGGAAGGA	G	3628.94	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=-1.912;DP=698;FS=2.226;HRun=0;HaplotypeScore=286.2693;InbreedingCoeff=0.7781;MQ=51.66;MQ0=6;MQRankSum=-6.360;QD=39.44;ReadPosRankSum=4.731;VQSLOD=2.8451;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:75.20:0,75,3733	1/1:0,8:8:9.03:319,9,0	0/0:27,0:16:8.82:0,9,448	0/0:22,0:18:18.06:0,18,555	0/0:22,0:22:63.16:0,63,1441	0/0:36,0:34:81.13:0,81,1866	0/0:29,0:29:72.25:0,72,1819	0/0:32,0:30:49.95:0,50,754	0/0:30,0:30:81.26:0,81,2631	0/0:31,0:30:63.17:0,63,2128	0/0:16,0:16:36.11:0,36,1025	0/0:11,0:32:27.04:0,27,717	0/0:10,0:27:18.53:0,19,627	0/0:43,0:43:99:0,117,3828	1/1:4,15:19:30.10:1062,30,0	1/1:6,33:40:63.22:2229,63,0	0/0:31,0:31:78.24:0,78,1744	0/0:22,0:22:51.16:0,51,1526	0/0:21,0:20:51.17:0,51,1410	0/0:16,0:16:42.13:0,42,939	0/0:25,0:24:51.37:0,51,728	0/0:19,0:20:30.08:0,30,584	0/0:7,0:18:21.06:0,21,691	0/1:9,0:24:18.57:19,0,469	0/0:17,0:17:45.09:0,45,1192	0/0:29,0:29:78.25:0,78,2827	0/0:25,0:25:9.50:0,10,285	0/0:5,0:5:15:0,15,357
chr10	49580019	.	A	AAGGAAGGAAGGAAGGG	15312.21	PASS	AB=1.000;AC=28;AF=0.500;AN=56;BaseQRankSum=3.125;DP=698;FS=4.804;HRun=0;HaplotypeScore=306.5628;InbreedingCoeff=-0.1503;MQ=51.18;MQ0=6;MQRankSum=-8.918;QD=27.44;ReadPosRankSum=3.994;VQSLOD=3.1472;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:81.21:0,81,2283	0/0:12,0:12:21.03:0,21,394	0/0:23,0:15:45.03:0,45,595	0/0:18,0:14:32.26:0,32,527	0/1:20,0:20:52.64:581,0,53	0/1:38,0:36:99:1068,0,204	0/1:31,0:31:99:792,0,159	1/1:40,0:40:99:1232,105,0	0/1:30,0:30:69.91:901,0,70	0/1:24,0:23:99:814,0,109	0/1:12,0:12:40.83:375,0,41	0/1:28,0:28:99:428,0,195	0/1:30,0:30:99:427,0,254	1/1:39,0:39:38.72:1675,39,0	0/0:23,0:23:53.31:0,53,1017	0/0:37,0:37:15.93:0,16,1546	0/1:36,0:36:99:836,0,255	0/1:23,0:23:99:715,0,165	1/1:22,0:21:60.06:856,60,0	1/1:20,0:20:50.18:871,50,0	1/1:25,0:24:56.75:703,57,0	0/1:19,0:19:99:164,0,101	0/1:13,0:13:8.98:468,0,9	0/1:25,0:24:99:373,0,174	0/1:18,0:18:62.40:648,0,62	0/1:28,0:28:61.73:1012,0,62	1/1:0,12:30:6.45:260,6,0	0/1:7,0:7:28.08:113,0,28
chr10	49581902	.	GT	G	949.69	PASS	AB=0.945;AC=10;AF=0.179;AN=56;BaseQRankSum=4.865;DP=721;FS=7.111;HRun=2;HaplotypeScore=147.2410;InbreedingCoeff=0.1714;MQ=56.38;MQ0=27;MQRankSum=-0.877;QD=5.49;ReadPosRankSum=-1.133;VQSLOD=-0.0772;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:41,1:41:99:0,109,1367	0/1:12,6:18:13.62:231,0,14	0/0:45,0:15:36.11:0,36,449	0/0:44,0:17:47.49:0,47,560	0/1:19,0:16:51.24:51,0,269	0/0:25,0:25:18.43:0,18,268	0/1:24,0:23:33.36:33,0,214	0/1:31,3:32:25.98:26,0,834	0/0:13,0:13:4.63:0,5,179	0/0:38,0:37:71.56:0,72,1299	0/0:12,3:14:13.59:0,14,279	0/0:24,2:24:5.36:0,5,398	0/1:21,0:21:27.45:27,0,173	0/0:24,1:24:51.14:0,51,604	1/1:12,11:23:45.70:391,46,0	1/1:11,7:17:3.77:327,4,0	0/0:40,1:38:46.31:0,46,830	0/0:20,0:20:18.19:0,18,410	0/0:16,0:14:28.94:0,29,415	0/0:16,0:16:30.02:0,30,367	0/0:46,4:48:16.96:0,17,889	0/1:16,0:16:10.28:10,0,193	0/0:20,1:20:9.89:0,10,294	0/0:29,0:29:25.07:0,25,253	0/0:24,1:24:6.96:0,7,311	0/0:30,0:29:77.22:0,77,939	0/0:16,0:16:21.87:0,22,260	0/0:10,0:10:8.48:0,8,234
chr10	49581903	.	TTGTGTG	T	2119.49	PASS	AB=0.867;AC=17;AF=0.304;AN=56;BaseQRankSum=-3.202;DP=728;FS=0.000;HRun=0;HaplotypeScore=193.6033;InbreedingCoeff=0.6278;MQ=56.14;MQ0=28;MQRankSum=-6.485;QD=9.77;ReadPosRankSum=-1.787;VQSLOD=2.5486;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:68.41:0,68,1775	0/0:13,0:19:20.51:0,21,125	0/0:45,0:14:3.01:0,3,44	0/0:45,0:18:2.98:0,3,22	0/0:17,0:16:11.04:0,11,306	1/1:7,15:24:23.98:448,24,0	0/1:6,12:23:3.34:218,0,3	0/0:32,0:30:29.01:0,29,323	1/1:5,9:14:13.97:228,14,0	0/0:39,0:38:49.31:0,49,848	0/0:15,0:14:15:0,15,291	1/1:16,9:25:29.80:508,30,0	1/1:5,14:20:23.92:476,24,0	0/0:25,0:24:39.13:0,39,936	0/1:22,0:22:52.48:108,0,52	0/1:19,0:18:21.42:21,0,31	0/0:41,0:38:39.13:0,39,948	0/0:21,0:21:21.06:0,21,457	0/0:13,0:15:18.59:0,19,271	0/0:10,0:16:12.02:0,12,198	0/0:46,0:49:49.41:0,49,817	1/1:6,9:16:2.90:29,3,0	1/1:11,8:21:6.57:125,7,0	1/1:14,15:29:8.99:144,9,0	0/0:21,0:24:32.78:0,33,771	0/0:32,0:31:30.72:0,31,534	0/0:6,0:17:4.26:0,4,64	0/0:8,0:9:15.05:0,15,369
chr10	49581906	.	TG	T	808.99	PASS	AB=0.735;AC=4;AF=0.071;AN=56;BaseQRankSum=4.269;DP=735;FS=1.260;HRun=1;HaplotypeScore=151.3486;InbreedingCoeff=0.4642;MQ=54.74;MQ0=30;MQRankSum=0.984;QD=13.71;ReadPosRankSum=2.140;VQSLOD=3.1692;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:39:99:0,99,1336	0/1:12,6:18:16:217,0,16	0/0:47,0:13:36.11:0,36,449	0/0:48,0:15:38.32:0,38,437	0/0:18,0:15:21.92:0,22,277	0/0:25,0:24:22.90:0,23,196	0/0:25,0:24:26.18:0,26,259	0/0:31,0:29:80.72:0,81,980	0/0:14,0:14:20.28:0,20,206	0/0:40,0:39:99:0,114,1492	0/0:17,0:16:32.97:0,33,419	0/0:26,0:24:33.76:0,34,339	0/0:19,0:20:20.21:0,20,176	0/0:24,0:23:48.01:0,48,643	1/1:13,8:23:46.96:391,47,0	0/1:11,6:17:13.32:317,0,13	0/0:41,0:38:64.15:0,64,915	0/0:21,0:21:26.65:0,27,456	0/0:19,0:17:44.25:0,44,531	0/0:17,0:17:30.09:0,30,380	0/0:51,1:50:64.41:0,64,1053	0/0:16,0:16:11.70:0,12,125	0/0:22,0:21:21.57:0,22,267	0/0:28,0:28:12.93:0,13,155	0/0:26,0:25:33.10:0,33,498	0/0:32,0:31:86.07:0,86,1078	0/0:17,0:17:21.95:0,22,259	0/0:9,0:9:24.08:0,24,307
chr10	49581924	.	T	TGTGC	5989.37	PASS	AB=0.916;AC=21;AF=0.375;AN=56;BaseQRankSum=-7.610;DP=717;FS=2.917;HRun=0;HaplotypeScore=158.4994;InbreedingCoeff=0.5717;MQ=52.63;MQ0=27;MQRankSum=5.402;QD=18.43;ReadPosRankSum=7.066;VQSLOD=4.4461;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:36:76.66:0,77,1156	0/0:20,0:20:38.18:0,38,375	0/0:44,0:16:41.84:0,42,375	0/0:43,0:8:20.98:0,21,182	0/1:5,10:15:32.06:287,0,32	0/0:27,0:26:37.37:0,37,395	0/0:29,0:28:31.48:0,31,317	0/0:28,0:26:32.08:0,32,407	0/0:14,0:14:26.88:0,27,228	1/1:5,27:32:67.39:1163,67,0	1/1:15,0:14:20.72:243,21,0	0/0:24,0:22:32.30:0,32,299	0/0:20,0:20:21.47:0,21,253	1/1:4,22:28:31.29:916,31,0	0/0:21,0:21:51.01:0,51,548	0/0:16,0:15:39.63:0,40,402	1/1:8,31:41:24.08:911,24,0	1/1:2,15:19:18.82:490,19,0	0/1:15,0:15:63.26:63,0,145	0/1:16,0:16:25.29:25,0,125	0/1:58,0:56:99:143,0,418	0/0:19,0:19:9.20:0,9,153	0/0:20,0:20:26.81:0,27,224	0/0:29,0:29:23.75:0,24,197	1/1:9,15:27:6.51:573,7,0	1/1:6,19:26:64.23:780,64,0	0/1:14,0:14:21.35:21,0,74	1/1:2,7:9:4.69:373,5,0
chr10	49582182	.	CA	C	2283.81	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=5.246;DP=697;FS=0.499;HRun=1;HaplotypeScore=78.2314;InbreedingCoeff=0.9970;MQ=85.58;MQ0=0;MQRankSum=-1.714;QD=35.68;ReadPosRankSum=2.612;VQSLOD=3.8678;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,141,2147	1/1:0,11:11:33.11:460,33,0	0/0:24,0:24:71.86:0,72,1053	0/0:19,0:20:57.08:0,57,802	0/0:20,0:20:57.18:0,57,887	0/0:40,0:40:99:0,117,1819	0/0:35,0:35:99:0,99,1502	0/0:35,0:35:99:0,105,1575	0/0:21,0:21:63.17:0,63,974	0/0:26,0:26:75.25:0,75,1161	0/0:17,0:17:42.14:0,42,669	0/0:24,0:24:72.23:0,72,1123	0/0:28,0:28:81.26:0,81,1267	0/0:23,0:23:63.20:0,63,983	1/1:0,32:32:87.29:1213,87,0	1/1:0,21:21:54.18:753,54,0	0/0:28,0:28:78.24:0,78,1216	0/0:21,0:21:60.20:0,60,959	0/0:15,0:15:45.10:0,45,647	0/0:26,0:26:75.21:0,75,1122	0/0:36,0:36:93.25:0,93,1412	0/0:23,0:23:63.21:0,63,1005	0/0:17,0:17:42.09:0,42,576	0/0:32,0:32:96.33:0,96,1533	0/0:20,0:20:51.15:0,51,768	0/0:26,0:26:78.26:0,78,1205	0/0:22,0:22:66.08:0,66,995	0/0:7,0:7:18.06:0,18,287
chr10	49582245	.	GT	G	11455.81	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=12.709;DP=687;FS=0.897;HRun=2;HaplotypeScore=70.7777;InbreedingCoeff=0.9998;MQ=84.52;MQ0=0;MQRankSum=-2.331;QD=34.93;ReadPosRankSum=1.062;VQSLOD=5.2766;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,108,1598	0/0:14,0:14:42.14:0,42,626	0/0:22,0:22:60.19:0,60,866	0/0:20,0:20:47.88:0,48,770	1/1:0,34:33:93.23:1186,93,0	0/0:29,0:29:87.27:0,87,1265	0/0:26,0:26:75.24:0,75,1101	1/1:0,23:23:69.20:867,69,0	0/0:23,0:23:69.22:0,69,1014	1/1:0,28:28:81.20:1021,81,0	1/1:0,22:22:60.19:777,60,0	0/0:22,0:22:66.21:0,66,969	0/0:30,0:30:90.30:0,90,1348	1/1:0,16:16:42.14:545,42,0	0/0:34,0:34:96.30:0,96,1396	0/0:16,0:16:45.13:0,45,636	1/1:0,28:28:78.21:984,78,0	1/1:0,16:16:42.14:545,42,0	1/1:1,23:24:69.20:867,69,0	1/1:0,21:21:60.13:757,60,0	1/1:0,26:26:63.20:818,63,0	0/0:26,0:26:75.20:0,75,1073	0/0:27,0:27:78.25:0,78,1147	0/0:32,0:32:96.29:0,96,1379	1/1:0,27:27:72.23:935,72,0	1/1:0,24:24:69.15:835,69,0	1/1:1,28:29:75.24:968,75,0	1/1:0,10:10:27.09:350,27,0
chr10	49585343	.	C	CT	2155.93	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-0.789;DP=618;FS=0.000;HRun=4;HaplotypeScore=63.7086;InbreedingCoeff=0.9981;MQ=89.23;MQ0=0;MQRankSum=-1.647;QD=30.80;ReadPosRankSum=2.740;VQSLOD=3.9786;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:84.22:0,84,941	1/1:3,11:14:27.09:369,27,0	0/0:22,0:22:63.15:0,63,690	0/0:23,0:24:43.22:0,43,604	0/0:21,0:21:60.15:0,60,667	0/0:21,0:21:60.17:0,60,680	0/0:23,0:23:66.17:0,66,739	0/0:37,0:37:99:0,99,1101	0/0:23,0:23:60.17:0,60,681	0/0:28,0:28:72.19:0,72,804	0/0:16,0:16:45.13:0,45,510	0/0:21,0:21:57.15:0,57,637	0/0:27,0:27:81.22:0,81,909	0/0:15,0:15:42.12:0,42,476	1/1:0,24:24:57.19:780,57,0	1/1:2,30:32:84.28:1149,84,0	0/0:23,0:23:66.19:0,66,748	0/0:23,0:23:63.18:0,63,713	0/0:15,0:15:45.13:0,45,510	0/0:25,0:25:63.16:0,63,705	0/0:21,0:21:57.16:0,57,646	0/0:24,0:24:66.19:0,66,749	0/0:18,0:18:45.13:0,45,510	0/0:7,0:7:21.06:0,21,238	0/0:17,0:17:48.14:0,48,545	0/0:23,0:23:60.17:0,60,681	0/0:25,0:25:75.21:0,75,850	0/0:17,0:17:45.13:0,45,510
chr10	49586199	.	CTTT	C	8507.04	PASS	AB=0.516;AC=41;AF=0.732;AN=56;BaseQRankSum=-4.164;DP=516;FS=2.676;HRun=14;HaplotypeScore=94.9527;InbreedingCoeff=0.9341;MQ=70.12;MQ0=2;MQRankSum=-2.723;QD=22.39;ReadPosRankSum=5.329;VQSLOD=4.2489;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,0:20:38.16:232,38,0	1/1:0,0:8:23.54:142,24,0	0/0:14,0:14:17.93:0,18,226	0/0:18,0:13:24.43:0,24,283	1/1:5,19:24:44.06:524,44,0	1/1:1,20:22:51.08:579,51,0	1/1:3,10:13:27.01:313,27,0	0/0:12,0:27:50.37:0,50,412	1/1:1,18:19:54.16:631,54,0	1/1:6,10:18:32.92:368,33,0	1/1:2,15:17:36:417,36,0	1/1:2,16:18:48.12:561,48,0	1/1:3,21:24:49.11:618,49,0	1/1:5,12:18:28.50:348,29,0	1/1:0,0:20:55.90:338,56,0	1/1:0,0:20:52.96:320,53,0	1/1:4,12:17:23.91:263,24,0	1/1:5,24:30:58.57:679,59,0	0/0:6,0:14:32.44:0,32,276	0/0:4,0:22:58.04:0,58,490	0/0:5,0:14:26.94:0,27,241	0/1:1,15:16:1.55:378,0,2	1/1:1,15:16:39.07:452,39,0	1/1:3,5:9:10.50:138,10,0	1/1:3,11:14:21.01:245,21,0	1/1:6,18:25:49.58:590,50,0	0/0:12,0:24:52.09:0,52,489	1/1:2,10:12:33.04:372,33,0
chr10	49586211	.	TTTC	T	1776.53	PASS	AB=0.991;AC=20;AF=0.357;AN=56;BaseQRankSum=5.954;DP=521;FS=7.598;HRun=0;HaplotypeScore=117.9079;InbreedingCoeff=-0.0415;MQ=71.53;MQ0=2;MQRankSum=-4.074;QD=5.73;ReadPosRankSum=7.588;VQSLOD=0.7052;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:8.42:0,8,61	0/0:8,0:8:1.74:0,2,11	0/0:17,0:14:19.47:0,19,250	0/0:18,0:13:29.49:0,29,360	0/1:24,1:25:55.10:102,0,55	1/1:21,0:21:40.34:187,40,0	0/1:12,0:12:17.53:95,0,18	0/0:25,0:25:57.56:0,58,505	0/1:21,0:21:16.23:179,0,16	0/1:14,0:14:32.34:85,0,32	0/1:22,0:22:86.31:86,0,139	0/1:20,0:20:40.55:172,0,41	1/1:24,1:25:3.83:187,4,0	0/1:16,1:17:37.60:80,0,38	0/0:23,0:23:34.74:0,35,132	0/0:22,0:22:22.28:0,22,101	0/1:14,0:14:1.06:77,0,1	0/1:29,1:30:6.18:202,0,6	0/0:15,0:15:41.24:0,41,383	0/0:26,0:26:71.71:0,72,666	0/0:16,0:16:33:0,33,292	0/1:17,0:17:10.93:96,0,11	0/1:18,0:18:21.15:102,0,21	0/1:8,0:8:17.77:25,0,18	0/1:12,0:12:4.12:58,0,4	0/1:23,0:23:62.78:105,0,63	0/0:21,0:20:53.59:0,54,575	1/1:11,0:11:26.60:109,27,0
chr10	49586621	.	CT	C	607.20	PASS	AB=0.982;AC=9;AF=0.161;AN=56;BaseQRankSum=-1.500;DP=564;FS=10.835;HRun=9;HaplotypeScore=118.5855;InbreedingCoeff=0.3110;MQ=80.62;MQ0=0;MQRankSum=0.896;QD=4.43;ReadPosRankSum=-4.168;VQSLOD=-0.5594;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:15,0:15:28.90:29,0,72	1/1:2,9:11:27.01:246,27,0	0/0:15,0:13:16.21:0,16,162	0/1:21,0:19:37.36:37,0,54	0/0:34,0:34:58.98:0,59,231	0/0:21,0:21:41:0,41,151	0/0:14,0:14:16.15:0,16,59	0/0:33,0:33:87.22:0,87,971	0/0:25,0:25:14.12:0,14,102	0/1:29,0:29:2.71:3,0,107	0/0:25,0:25:3.21:0,3,101	0/0:12,0:13:4.90:0,5,54	0/1:20,1:21:19.53:20,0,82	0/0:15,0:15:30.77:0,31,106	1/1:3,16:19:45.02:411,45,0	0/0:16,0:16:15.93:0,16,114	0/0:13,0:13:16.08:0,16,89	0/0:13,0:13:24.44:0,24,91	0/0:22,0:22:48.13:0,48,544	0/0:36,0:36:99:0,105,1162	0/0:13,0:13:24.08:0,24,327	0/0:15,0:15:10.96:0,11,75	0/0:23,0:23:28.60:0,29,133	0/0:8,0:8:7.64:0,8,45	0/0:19,0:19:42.49:0,42,136	0/1:20,1:21:6.13:6,0,62	0/0:38,0:37:99:0,105,1161	0/0:16,0:16:37.29:0,37,138
chr10	49587376	.	GTC	G	2878.56	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=12.262;DP=710;FS=0.422;HRun=0;HaplotypeScore=99.0779;InbreedingCoeff=0.9983;MQ=79.93;MQ0=1;MQRankSum=-1.999;QD=27.41;ReadPosRankSum=4.188;VQSLOD=4.9993;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,29:37:81.26:1013,81,0	1/1:2,8:10:24.08:300,24,0	0/0:48,0:45:55.95:0,56,1125	0/0:42,0:38:58.32:0,58,998	0/0:23,0:23:57.18:0,57,903	0/0:20,0:20:45.15:0,45,736	0/0:17,0:17:45.15:0,45,743	0/0:31,0:31:72.24:0,72,1168	0/0:21,0:21:48.16:0,48,792	0/0:30,0:30:81.24:0,81,1310	0/0:13,0:13:36.12:0,36,594	0/0:37,1:38:99:0,99,1575	0/0:20,0:20:57.19:0,57,941	0/0:27,0:27:72.23:0,72,1164	1/1:4,26:30:69.22:863,69,0	1/1:2,26:28:69.22:863,69,0	0/0:26,0:26:75.26:0,75,1238	0/0:18,0:18:36.12:0,36,593	0/0:16,0:16:39.13:0,39,639	0/0:22,1:23:22.67:0,23,877	0/0:23,0:23:57.19:0,57,941	0/0:25,0:25:72.23:0,72,1164	0/0:18,0:18:45.15:0,45,743	0/0:25,0:25:63.19:0,63,998	0/0:31,2:33:46.75:0,47,1273	0/0:31,0:31:93.31:0,93,1511	0/0:26,1:27:34.69:0,35,1047	0/0:10,0:10:30.10:0,30,495
chr10	49592396	.	C	CTTTT	512.04	PASS	AB=0.950;AC=14;AF=0.250;AN=56;BaseQRankSum=5.550;DP=492;FS=15.690;HRun=10;HaplotypeScore=116.1780;InbreedingCoeff=-0.1819;MQ=48.21;MQ0=11;MQRankSum=-6.464;QD=2.12;ReadPosRankSum=1.201;VQSLOD=-0.4250;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:19:21.38:0,21,267	0/0:7,0:7:17.91:0,18,185	0/0:15,0:5:12.03:0,12,128	0/0:20,0:7:5.91:0,6,45	0/0:22,0:22:2.65:0,3,229	0/0:12,0:12:19.44:0,19,255	0/1:10,0:8:3.22:3,0,119	0/1:32,0:32:41.61:42,0,238	0/0:19,0:18:18.45:0,18,187	0/1:22,0:21:99:102,0,227	0/1:22,0:22:20.35:20,0,215	0/0:13,0:13:5.54:0,6,144	0/0:10,0:11:10.19:0,10,117	0/1:14,0:14:47.29:47,0,98	0/0:20,0:20:10.71:0,11,273	0/1:13,0:12:6.38:197,0,6	0/1:13,0:16:18.21:18,0,249	0/0:16,0:12:3.72:0,4,179	0/0:26,0:26:9.28:0,9,347	0/1:14,5:21:15.22:15,0,296	0/1:5,0:4:7.37:7,0,52	0/0:13,0:13:17.64:0,18,150	0/0:22,0:22:36.94:0,37,326	0/0:14,0:14:5.05:0,5,22	0/1:26,0:28:39.66:40,0,57	0/1:18,0:18:38.93:39,0,240	0/1:31,0:31:90.62:91,0,268	1/1:7,0:7:8.42:40,8,0
chr10	49592404	.	C	CTTT	5525.26	PASS	AB=0.905;AC=52;AF=0.929;AN=56;BaseQRankSum=-1.460;DP=521;FS=1.599;HRun=14;HaplotypeScore=86.1198;InbreedingCoeff=0.2777;MQ=46.55;MQ0=17;MQRankSum=0.605;QD=10.98;ReadPosRankSum=1.852;VQSLOD=2.2296;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,1:21:21.56:163,22,0	1/1:4,0:7:8.97:68,9,0	0/1:14,0:5:0:0,0,0	0/0:17,0:5:1.40:0,1,4	1/1:13,6:21:20.98:266,21,0	1/1:5,6:14:12.46:125,12,0	1/1:11,0:10:18:221,18,0	1/1:31,0:30:34.20:206,34,0	1/1:6,12:17:4.83:58,5,0	1/1:11,10:21:38.93:486,39,0	1/1:16,2:23:42.24:424,42,0	1/1:15,0:16:17.96:187,18,0	1/1:4,8:13:2.99:23,3,0	1/1:12,0:13:25.86:283,26,0	1/1:14,1:22:34.46:373,34,0	0/1:13,0:15:11.70:211,0,12	1/1:22,0:18:17.13:131,17,0	1/1:16,0:12:11.26:95,11,0	1/1:22,0:20:20.70:325,21,0	1/1:23,0:22:32.12:301,32,0	1/1:6,0:5:5.45:37,5,0	1/1:3,10:14:11.99:156,12,0	1/1:8,13:22:8.99:98,9,0	1/1:3,13:17:6.44:45,6,0	1/1:9,0:31:32.56:400,33,0	1/1:7,10:19:26.44:316,26,0	1/1:31,0:31:47.64:374,48,0	1/1:3,0:10:13.54:151,14,0
chr10	49596390	.	C	CAT	5581.91	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-13.047;DP=558;FS=1.301;HRun=0;HaplotypeScore=62.7545;InbreedingCoeff=0.9942;MQ=80.26;MQ0=0;MQRankSum=-0.664;QD=38.50;ReadPosRankSum=2.382;VQSLOD=6.9838;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:42.13:0,42,530	0/0:7,0:7:21.07:0,21,264	0/0:23,0:23:42.10:0,42,493	0/0:16,0:16:39.09:0,39,450	1/1:4,22:26:63.22:1047,63,0	0/0:28,0:28:72.23:0,72,907	0/0:14,0:14:42.13:0,42,529	0/0:42,0:42:99:0,99,1250	0/0:17,0:17:48.14:0,48,594	1/1:5,15:20:51.15:809,51,0	1/1:0,11:11:24.08:399,24,0	0/0:19,0:19:54.11:0,54,638	0/0:15,0:15:39.12:0,39,492	1/1:1,17:19:42.14:698,42,0	0/0:20,0:20:51.16:0,51,644	0/0:31,0:31:75.23:0,75,935	1/1:1,9:10:21.07:349,21,0	1/1:1,14:15:30.10:499,30,0	0/0:21,0:21:48.13:0,48,583	0/0:25,0:25:51.14:0,51,627	0/0:26,0:26:60.16:0,60,729	0/0:16,0:17:47.52:0,48,576	0/0:29,0:29:72.20:0,72,882	0/0:10,0:10:18.02:0,18,209	1/1:1,9:10:24.08:399,24,0	1/1:2,23:26:69.24:1133,69,0	0/0:35,0:34:87.28:0,87,1096	1/1:0,8:7:15.05:249,15,0
chr10	49596547	.	TCCTC	T	3190.67	PASS	AB=1.000;AC=26;AF=0.481;AN=54;BaseQRankSum=0.509;DP=534;FS=17.166;HRun=0;HaplotypeScore=102.3283;InbreedingCoeff=0.4440;MQ=61.74;MQ0=25;MQRankSum=0.959;QD=12.13;ReadPosRankSum=-0.839;VQSLOD=1.5375;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:21:39.53:0,40,421	0/0:13,0:12:12.50:0,13,150	0/0:30,0:18:37.05:0,37,398	0/0:46,0:19:40.74:0,41,343	1/1:21,0:19:24.11:311,24,0	1/1:17,0:16:38.54:384,39,0	./.	0/0:31,0:31:92.65:0,93,821	1/1:13,1:14:32.28:318,32,0	0/1:15,0:14:38.08:217,0,38	1/1:18,0:18:0.68:242,1,0	0/1:23,0:22:99:180,0,237	1/1:8,0:8:20.93:170,21,0	0/1:19,0:19:17.70:224,0,18	0/0:16,0:16:10.57:0,11,253	0/0:23,0:23:24.72:0,25,395	0/1:19,0:19:93.17:161,0,93	0/1:15,0:14:99:131,0,151	0/0:16,0:15:36.87:0,37,376	0/0:24,0:23:56.72:0,57,592	0/0:22,0:22:6.75:0,7,507	1/1:8,0:8:12:104,12,0	1/1:2,14:17:0.44:35,0,0	1/1:3,16:19:7.27:127,7,0	1/1:16,0:15:27.94:269,28,0	0/1:19,0:19:72.18:249,0,72	0/0:15,0:14:32.65:0,33,356	1/1:14,0:14:20.89:265,21,0
chr10	49596643	.	AC	A	718.68	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=0.001;DP=442;FS=9.151;HRun=6;HaplotypeScore=85.1040;InbreedingCoeff=0.9331;MQ=76.90;MQ0=2;MQRankSum=-0.726;QD=23.18;ReadPosRankSum=1.511;VQSLOD=2.8953;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,23:22:60.15:645,60,0	0/0:2,0:2:6.02:0,6,79	0/0:28,0:22:46.12:0,46,600	0/0:21,0:20:17.88:0,18,352	0/0:17,0:17:51.16:0,51,664	0/0:21,0:20:57.17:0,57,735	0/0:18,0:18:54.16:0,54,693	0/0:25,0:26:66.14:0,66,782	0/0:9,0:9:27.09:0,27,355	0/0:14,0:14:39.12:0,39,499	0/0:12,0:12:35.95:0,36,448	0/0:15,0:14:42.14:0,42,550	0/0:15,0:15:45.15:0,45,592	0/0:16,0:16:48.13:0,48,603	0/0:22,0:22:60.20:0,60,789	1/1:0,8:8:18.01:193,18,0	0/0:19,0:19:57.19:0,57,749	0/0:10,0:10:27.09:0,27,355	0/0:17,0:17:45.15:0,45,590	0/0:13,0:13:39.08:0,39,467	0/0:8,0:8:24.08:0,24,314	0/0:16,0:16:45.14:0,45,577	0/0:9,0:9:27.09:0,27,355	0/0:28,0:28:84.24:0,84,1069	0/0:9,0:9:24.07:0,24,302	0/0:17,0:17:51.15:0,51,647	0/0:23,0:23:66.21:0,66,861	0/0:6,0:6:18.05:0,18,223
chr10	49597060	.	TCACCCCC	T	284.88	PASS	AC=2;AF=0.042;AN=48;BaseQRankSum=0.787;DP=166;FS=3.266;HRun=0;HaplotypeScore=45.1226;InbreedingCoeff=0.2074;MQ=100.16;MQ0=0;MQRankSum=-1.083;QD=16.76;ReadPosRankSum=-1.831;VQSLOD=1.6841;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:12.02:0,12,298	0/0:2,0:2:3.01:0,3,107	0/0:13,0:11:2.86:0,3,230	0/0:17,0:16:11.33:0,11,380	0/0:3,0:3:3:0,3,26	./.	0/0:6,0:6:12.03:0,12,257	0/0:6,0:6:8.81:0,9,59	0/0:6,0:6:12:0,12,249	0/0:3,0:3:6.01:0,6,57	./.	0/0:2,0:2:3:0,3,27	0/0:9,0:9:12.02:0,12,295	0/0:5,0:5:9.03:0,9,250	0/0:4,0:4:12.02:0,12,191	1/1:4,13:17:18.01:373,18,0	0/0:7,0:7:9.02:0,9,206	0/0:4,0:4:9.03:0,9,231	0/0:9,0:9:3.01:0,3,53	0/0:5,0:5:6.01:0,6,140	0/0:4,0:4:3:0,3,27	./.	0/0:3,0:3:3.01:0,3,90	0/0:6,0:6:9.03:0,9,270	0/0:2,0:2:3:0,3,26	0/0:6,0:6:3.01:0,3,90	0/0:8,0:8:17.93:0,18,533	./.
chr10	49597062	.	A	AC	1074.60	PASS	AC=28;AF=0.560;AN=50;BaseQRankSum=-5.622;DP=160;FS=5.592;HRun=6;HaplotypeScore=22.3383;InbreedingCoeff=0.7341;MQ=100.66;MQ0=1;MQRankSum=0.040;QD=17.33;ReadPosRankSum=3.000;VQSLOD=2.0234;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:27.03:0,27,267	0/0:2,0:2:3.01:0,3,31	0/0:14,0:11:18.77:0,19,121	0/0:14,0:15:23.46:0,23,165	1/1:2,1:3:3.01:37,3,0	1/1:2,0:2:6.01:62,6,0	1/1:2,4:6:12.04:151,12,0	0/0:6,0:6:12.02:0,12,117	1/1:0,6:6:12.04:151,12,0	1/1:1,2:3:8.97:81,9,0	./.	1/1:1,1:2:3.01:38,3,0	1/1:1,8:9:12.04:151,12,0	1/1:1,4:5:9.03:113,9,0	0/0:4,0:4:12.02:0,12,121	0/0:15,0:15:17.87:0,18,102	1/1:2,3:5:9.03:113,9,0	1/1:0,4:4:9.03:113,9,0	0/0:9,0:9:15.02:0,15,148	0/0:5,0:5:9.02:0,9,91	0/0:4,0:4:6.01:0,6,61	./.	1/1:1,2:3:3.01:38,3,0	1/1:0,6:6:9.03:112,9,0	1/1:2,0:2:3.01:38,3,0	1/1:3,3:5:6:61,6,0	0/0:8,0:8:18.04:0,18,181	./.
chr10	49597788	.	G	GGT	17031.40	PASS	AB=0.556;AC=33;AF=0.589;AN=56;BaseQRankSum=-14.690;DP=930;FS=0.585;HRun=0;HaplotypeScore=129.3494;InbreedingCoeff=0.9036;MQ=61.00;MQ0=8;MQRankSum=1.873;QD=31.54;ReadPosRankSum=5.074;VQSLOD=6.9305;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:36:62.52:0,63,824	0/0:18,0:19:54:0,54,658	0/0:36,0:28:50.79:0,51,603	0/0:44,0:31:37.79:0,38,683	1/1:5,22:26:42.14:682,42,0	1/1:5,25:31:57.19:935,57,0	1/1:9,17:26:3.50:879,4,0	0/0:42,0:42:93.01:0,93,1125	1/1:4,30:34:37.40:1159,37,0	1/1:10,33:46:99:1552,99,0	0/1:4,15:20:30.47:587,0,30	1/1:5,36:43:65.90:1373,66,0	1/1:9,39:48:72.24:1181,72,0	1/1:3,22:25:48.16:798,48,0	0/0:37,0:37:90.29:0,90,1136	0/0:42,0:42:99:0,108,1330	1/1:3,18:21:48.15:783,48,0	1/1:5,16:22:52.67:811,53,0	0/0:23,0:23:44.50:0,44,526	0/0:34,0:34:86.95:0,87,1070	0/0:40,0:39:96.29:0,96,1197	1/1:6,32:39:68.85:1145,69,0	1/1:4,27:33:54.16:897,54,0	1/1:4,26:31:51.13:848,51,0	1/1:3,29:33:69.19:1117,69,0	1/1:7,40:45:99:1886,114,0	0/0:37,0:37:99:0,99,1249	1/1:0,10:11:24.08:399,24,0
chr10	49598028	.	GGTGT	G	2199.75	PASS	AB=0.714;AC=11;AF=0.212;AN=52;BaseQRankSum=-5.994;DP=796;FS=11.367;HRun=0;HaplotypeScore=222.1317;InbreedingCoeff=0.8024;MQ=53.53;MQ0=16;MQRankSum=4.627;QD=11.05;ReadPosRankSum=-0.770;VQSLOD=1.9357;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:27,18:45:21.49:491,0,21	0/0:7,0:10:9.02:0,9,130	./.	./.	0/0:24,0:26:31.73:0,32,485	0/0:19,0:22:33.09:0,33,533	0/0:32,0:33:29.79:0,30,288	1/1:21,6:28:17.94:199,18,0	0/0:29,0:32:41.88:0,42,542	0/0:37,0:37:57.98:0,58,913	0/0:12,0:13:12.01:0,12,152	0/0:37,0:41:42.10:0,42,645	0/0:23,0:29:36.07:0,36,570	0/0:25,0:30:59.12:0,59,739	0/0:15,0:27:14.89:0,15,201	0/0:32,0:34:34.87:0,35,420	0/0:20,0:21:23.95:0,24,402	0/0:32,0:32:45.39:0,45,593	1/1:14,1:15:2.03:46,2,0	1/1:10,9:20:27.04:362,27,0	1/1:34,30:63:50.96:814,51,0	0/0:28,0:32:29.49:0,29,436	0/0:12,0:15:27.03:0,27,348	0/0:25,0:28:32.80:0,33,447	0/0:23,0:23:15.02:0,15,195	0/0:30,0:30:60.08:0,60,880	1/1:11,12:27:23.32:454,23,0	0/0:10,0:11:12.02:0,12,177
chr10	49598069	.	A	ATGCG	6123.90	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=11.117;DP=683;FS=18.196;HRun=0;HaplotypeScore=193.4229;InbreedingCoeff=0.8743;MQ=68.78;MQ0=11;MQRankSum=-7.703;QD=16.29;ReadPosRankSum=2.333;VQSLOD=3.4950;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:93.12:0,93,1595	0/0:6,0:6:8.35:0,8,151	0/0:34,0:18:41.23:0,41,769	0/0:40,0:25:71.96:0,72,1136	1/1:7,16:24:17.29:352,17,0	1/1:21,2:23:4.62:463,5,0	1/1:26,1:27:25.97:252,26,0	0/0:30,0:30:81.24:0,81,1386	1/1:16,3:19:29.74:309,30,0	1/1:5,14:21:38.13:585,38,0	1/1:2,17:19:8.94:139,9,0	1/1:32,2:34:59.34:624,59,0	1/1:6,20:29:32.62:586,33,0	1/1:6,21:27:32.67:626,33,0	0/0:17,0:17:28.44:0,28,523	0/0:19,0:19:32.14:0,32,547	1/1:3,15:19:6.02:113,6,0	1/1:8,19:28:3.25:311,3,0	0/0:17,0:16:32.20:0,32,575	0/0:23,0:23:66.23:0,66,1218	0/0:56,0:56:99:0,132,2280	1/1:22,3:25:45.68:479,46,0	1/1:0,13:13:11.54:209,12,0	1/1:6,21:29:6.02:112,6,0	1/1:4,9:13:6.02:158,6,0	1/1:4,18:23:32.57:756,33,0	0/0:26,0:26:66.22:0,66,1222	1/1:2,0:2:5.93:52,6,0
chr10	49599242	.	GGT	G	1224.07	PASS	AB=0.891;AC=34;AF=0.739;AN=46;BaseQRankSum=2.591;DP=699;FS=16.950;HRun=0;HaplotypeScore=123.5057;InbreedingCoeff=0.2016;MQ=62.87;MQ0=13;MQRankSum=-1.553;QD=2.50;ReadPosRankSum=-1.388;VQSLOD=0.8945;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:8,0:8:9.03:0,9,106	./.	./.	0/1:17,6:21:8.95:85,0,9	1/1:8,0:15:8.52:42,9,0	1/1:15,0:23:14.16:69,14,0	./.	1/1:22,0:29:7.72:34,8,0	1/1:17,9:26:14.12:141,14,0	0/1:15,1:16:18.96:26,0,19	1/1:25,0:27:15.35:71,15,0	1/1:13,0:16:2.84:14,3,0	1/1:11,7:18:6.02:65,6,0	0/0:35,0:35:42.10:0,42,485	1/1:25,0:30:11.36:56,11,0	1/1:15,9:23:4.08:207,4,0	0/1:16,1:18:6.70:48,0,7	1/1:14,0:22:5.46:37,5,0	1/1:9,0:26:8.97:71,9,0	0/1:44,0:41:14.43:14,0,18	0/1:23,0:23:4.10:4,0,24	./.	1/1:30,1:36:15.76:119,16,0	0/0:18,0:18:3.01:0,3,44	1/1:25,4:28:8.98:78,9,0	1/1:11,0:21:14.41:95,14,0	0/1:12,8:19:44.74:93,0,45
chr10	49599360	.	T	TGATTATGTG	23558.95	PASS	AB=0.575;AC=33;AF=0.589;AN=56;BaseQRankSum=6.519;DP=613;FS=9.755;HRun=0;HaplotypeScore=252.8339;InbreedingCoeff=0.9068;MQ=85.20;MQ0=4;MQRankSum=-15.219;QD=82.95;ReadPosRankSum=-2.645;VQSLOD=3.2538;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:21:45.20:0,45,889	0/0:11,0:11:30.10:0,30,830	0/0:40,0:34:87.28:0,87,2017	0/0:50,0:40:75.72:0,76,1823	1/1:10,11:21:48.16:1581,48,0	1/1:7,7:16:33.10:1075,33,0	1/1:9,7:20:22.32:991,22,0	0/0:36,0:35:78.22:0,78,1960	1/1:7,14:25:57.66:2464,58,0	1/1:12,5:17:39.13:1688,39,0	1/1:2,10:12:30.10:1074,30,0	1/1:8,14:23:57.66:2048,58,0	1/1:2,6:11:29.46:1277,29,0	1/1:11,11:26:45.15:1807,45,0	0/0:51,0:51:99:0,141,3843	0/0:26,0:26:66.21:0,66,1472	1/1:3,4:8:14.16:623,14,0	1/1:5,7:12:27.09:1112,27,0	0/0:28,0:28:72.22:0,72,1918	0/0:20,0:20:51.17:0,51,1330	0/0:23,0:23:36.11:0,36,845	1/1:5,9:15:45.15:1781,45,0	1/1:4,14:21:39.60:1439,40,0	1/1:2,10:12:6.49:185,6,0	1/1:3,15:20:45.15:1950,45,0	0/1:6,15:23:3.72:2442,0,4	0/0:22,0:22:56.77:0,57,1256	1/1:2,0:2:2.98:21,3,0
chr10	49599368	.	T	TG	4336.38	PASS	AB=0.943;AC=26;AF=0.464;AN=56;BaseQRankSum=14.995;DP=581;FS=19.847;HRun=1;HaplotypeScore=231.8752;InbreedingCoeff=0.4331;MQ=80.97;MQ0=5;MQRankSum=-14.803;QD=17.01;ReadPosRankSum=-5.218;VQSLOD=1.4424;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:19:45.12:0,45,541	0/0:12,0:12:33.08:0,33,411	0/0:46,0:36:99:0,100,1224	0/0:51,0:41:90.20:0,90,1140	1/1:17,2:19:11.88:432,12,0	0/1:14,1:15:24.12:252,0,24	0/1:13,0:13:2.79:129,0,3	0/0:32,0:31:87.28:0,87,1118	1/1:23,1:24:55.85:478,56,0	0/1:15,1:16:68.53:69,0,196	0/1:9,0:9:5.23:214,0,5	1/1:22,0:22:55.98:499,56,0	1/1:12,0:12:27.06:208,27,0	1/1:22,0:22:5.80:374,6,0	0/0:50,0:50:99:0,141,1828	0/0:25,0:25:69.21:0,69,858	0/1:8,0:8:56.16:79,0,56	0/1:9,0:9:13.74:97,0,14	0/0:29,0:29:81.24:0,81,1031	0/0:20,0:20:51.16:0,51,657	0/0:19,0:19:39.10:0,39,476	1/1:18,2:20:27.11:473,27,0	1/1:17,0:17:9.65:365,10,0	1/1:8,0:8:6.02:83,6,0	1/1:17,1:18:25.23:340,25,0	0/1:21,0:21:20.60:232,0,21	0/0:20,0:20:57.18:0,57,725	0/1:1,1:2:12.89:13,0,33
chr10	49599376	.	C	CCTCTCTCTCTCTCTCT	8847.65	PASS	AB=0.991;AC=40;AF=0.714;AN=56;BaseQRankSum=-1.314;DP=642;FS=0.643;HRun=0;HaplotypeScore=330.0908;InbreedingCoeff=0.4898;MQ=66.66;MQ0=8;MQRankSum=-6.075;QD=17.77;ReadPosRankSum=-2.825;VQSLOD=2.3966;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:24:6.85:536,7,0	0/0:11,0:12:24.07:0,24,779	0/0:43,0:29:17.81:0,18,296	0/1:48,0:35:30.35:30,0,937	0/0:23,0:23:2.80:0,3,13	0/1:12,0:12:0:0,0,0	1/1:16,0:16:9.03:360,9,0	1/1:49,0:42:46.25:1457,46,0	1/1:23,0:20:2.99:23,3,0	1/1:17,0:16:16.61:504,17,0	1/1:11,0:10:2.29:8,2,0	1/1:18,0:18:0.68:56,1,0	1/1:13,0:12:2.97:10,3,0	1/1:20,0:20:3.48:163,3,0	0/0:38,0:44:80.26:0,80,2988	1/1:18,4:34:11.71:655,12,0	1/1:7,0:8:6.02:292,6,0	1/1:7,1:7:6.02:407,6,0	1/1:38,0:38:48.13:1438,48,0	1/1:22,1:25:21.35:579,21,0	1/1:27,0:27:3.47:27,3,0	0/1:21,0:21:0:0,0,0	0/0:19,0:19:1.34:0,1,3	0/1:8,0:8:0:0,0,0	1/1:24,0:22:0.47:1,0,0	1/1:21,0:18:9.03:415,9,0	1/1:22,3:28:36.70:1886,37,0	0/0:2,0:2:2.69:0,3,8
chr10	49599405	.	A	ATGTGTGTG	1094.41	PASS	AB=0.875;AC=23;AF=0.442;AN=52;BaseQRankSum=7.204;DP=428;FS=0.000;HRun=0;HaplotypeScore=136.3304;InbreedingCoeff=0.5957;MQ=56.20;MQ0=6;MQRankSum=-5.758;QD=7.44;ReadPosRankSum=-2.826;VQSLOD=1.7064;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:3.24:0,3,22	0/0:10,0:10:27.03:0,27,620	0/0:35,0:22:40.05:0,40,1037	0/0:47,0:30:18.48:0,18,573	1/1:15,0:15:6:65,6,0	1/1:1,3:5:3.01:123,3,0	0/1:11,0:11:0.01:0,0,0	0/0:31,0:29:69.23:0,69,1590	0/0:3,0:7:2.91:0,3,82	1/1:14,0:14:29.31:603,29,0	1/1:11,1:11:2.58:44,3,0	1/1:13,0:11:0.89:3,1,0	./.	1/1:6,0:6:5.51:117,6,0	0/0:41,0:41:95.97:0,96,2389	0/0:26,0:26:22.11:0,22,645	1/1:3,0:3:8.62:52,9,0	1/1:5,0:5:4.12:18,4,0	0/0:14,0:14:41.75:0,42,784	0/0:21,0:21:26.34:0,26,680	0/0:16,0:16:24.09:0,24,566	0/1:6,6:14:0.06:1,0,0	0/0:3,5:9:0.47:0,0,1	./.	1/1:6,7:13:3.01:123,3,0	1/1:13,0:11:9.30:99,9,0	0/1:19,0:18:6.20:6,0,663	0/0:3,0:3:2.69:0,3,12
chr10	49599593	.	G	GC	4291.13	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=14.486;DP=653;FS=7.065;HRun=1;HaplotypeScore=115.4965;InbreedingCoeff=0.9994;MQ=84.95;MQ0=0;MQRankSum=-6.992;QD=35.76;ReadPosRankSum=-1.786;VQSLOD=3.5692;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,144,1806	0/0:14,0:14:42.14:0,42,544	0/0:20,0:20:60.12:0,60,718	0/0:30,0:30:84.12:0,84,1041	0/0:21,0:21:51.17:0,51,662	0/0:12,0:12:27.09:0,27,349	0/0:21,0:21:57.16:0,57,710	1/1:6,27:33:95.90:1228,96,0	0/0:13,0:13:36.12:0,36,467	0/0:25,0:25:72.23:0,72,933	0/0:18,0:18:51.17:0,51,660	0/0:29,0:29:81.26:0,81,1050	0/0:15,0:15:42.14:0,42,543	0/0:24,0:24:69.18:0,69,876	0/0:36,0:36:99:0,99,1240	0/0:28,0:28:84.27:0,84,1090	0/0:27,0:27:81.26:0,81,1051	0/0:13,0:13:39.10:0,39,489	1/1:2,22:24:69.20:910,69,0	1/1:4,20:24:64.10:835,64,0	1/1:0,18:18:37.39:484,37,0	0/0:19,0:19:51.15:0,51,646	0/0:23,0:23:60.18:0,60,763	0/0:22,0:22:63.19:0,63,800	0/0:30,0:30:90.27:0,90,1152	0/0:30,0:30:90.29:0,90,1168	1/1:0,21:21:60.20:834,60,0	0/0:10,0:10:27.09:0,27,350
chr10	49600106	.	AC	A	5595.61	PASS	AC=10;AF=0.185;AN=54;BaseQRankSum=13.364;DP=790;FS=4.018;HRun=1;HaplotypeScore=81.2723;InbreedingCoeff=0.9995;MQ=87.50;MQ0=0;MQRankSum=-4.881;QD=38.59;ReadPosRankSum=-1.500;VQSLOD=4.8093;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,138,2136	0/0:8,0:8:24.08:0,24,384	0/0:31,0:31:93.31:0,93,1447	0/0:23,0:23:48.62:0,49,957	0/0:24,0:24:72.25:0,72,1147	0/0:18,0:18:54.17:0,54,822	0/0:30,0:30:90.26:0,90,1352	1/1:0,34:34:93.24:1196,93,0	0/0:23,0:23:69.20:0,69,1053	0/0:31,0:31:90.30:0,90,1412	0/0:25,0:25:75.24:0,75,1170	0/0:42,0:42:99:0,126,1929	0/0:32,0:32:96.33:0,96,1533	0/0:36,0:36:99:0,108,1717	0/0:42,0:42:99:0,126,2006	0/0:41,0:41:99:0,123,1928	0/0:30,0:30:90.31:0,90,1438	0/0:25,0:25:75.26:0,75,1190	1/1:0,26:26:75.23:1027,75,0	1/1:0,28:28:81.24:1109,81,0	1/1:0,33:33:90.30:1259,90,0	0/0:31,0:31:90.28:0,90,1414	0/0:27,0:27:81.15:0,81,1223	0/0:16,0:16:45.15:0,45,719	0/0:24,0:24:72.25:0,72,1151	0/0:40,0:40:99:0,114,1823	1/1:0,24:24:72.24:1006,72,0	./.
chr10	49600780	.	GACAC	G	3217.75	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=11.787;DP=657;FS=18.201;HRun=0;HaplotypeScore=161.4857;InbreedingCoeff=0.9971;MQ=83.23;MQ0=0;MQRankSum=-11.409;QD=39.24;ReadPosRankSum=-0.073;VQSLOD=2.4858;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,102,2770	0/0:18,0:18:51.18:0,51,1427	0/0:23,0:23:66.06:0,66,1751	0/0:26,0:26:72.20:0,72,1883	0/0:18,0:18:54.19:0,54,1491	0/0:19,0:19:57.20:0,57,1595	0/0:24,0:24:72.25:0,72,1974	1/1:7,10:18:36.12:687,36,0	0/0:14,0:14:42.13:0,42,1115	0/0:27,0:27:81.28:0,81,2260	0/0:26,0:26:78.27:0,78,2098	0/0:37,0:37:99:0,111,2994	0/0:31,0:31:90.30:0,90,2445	0/0:34,0:34:99:0,99,2727	0/0:30,0:30:90.31:0,90,2493	0/0:23,0:23:66.23:0,66,1849	0/0:40,0:40:99:0,111,3031	0/0:16,0:16:48.16:0,48,1344	1/1:3,5:9:18.04:316,18,0	1/1:2,21:25:69.19:1253,69,0	1/1:5,6:14:20.81:364,21,0	0/0:31,0:31:90.31:0,90,2425	0/0:15,0:15:45.15:0,45,1238	0/0:28,0:28:78.20:0,78,2041	0/0:17,0:17:51.18:0,51,1413	0/0:29,0:29:87.30:0,87,2435	1/1:1,14:16:42.10:772,42,0	0/0:15,0:15:45.15:0,45,1238
chr10	49600787	.	GAGTTTATTC	G	5363.76	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=12.554;DP=633;FS=13.942;HRun=0;HaplotypeScore=216.1160;InbreedingCoeff=0.9953;MQ=86.05;MQ0=0;MQRankSum=-10.998;QD=87.93;ReadPosRankSum=0.220;VQSLOD=3.7567;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,102,4745	0/0:19,0:19:54.19:0,54,2675	0/0:23,0:23:63.22:0,63,3023	0/0:26,0:26:78.26:0,78,3198	0/0:19,0:19:57.20:0,57,2752	0/0:18,0:18:54.19:0,54,2598	0/0:24,0:24:69.24:0,69,3277	1/1:0,13:13:39.13:1148,39,0	0/0:13,0:13:39.13:0,39,1935	0/0:29,0:29:87.30:0,87,4282	0/0:23,0:23:66.23:0,66,2945	0/0:34,0:34:99:0,102,4887	0/0:29,0:29:87.30:0,87,4068	0/0:33,0:33:96.32:0,96,4414	0/0:29,0:29:84.29:0,84,4143	0/0:25,0:25:75.26:0,75,3598	0/0:41,0:41:99:0,114,5455	0/0:19,0:19:54.17:0,54,2516	1/1:0,5:5:15.05:467,15,0	1/1:0,21:21:63.22:1926,63,0	1/1:1,6:7:21.07:588,21,0	0/0:27,0:27:81.26:0,81,3838	0/0:14,0:14:39.13:0,39,1936	0/0:25,0:25:72.25:0,72,3449	0/0:18,0:18:54.19:0,54,2600	0/0:33,0:33:99:0,99,4457	1/1:1,14:15:42.14:1234,42,0	0/0:16,0:16:48.16:0,48,2274
chr10	49601238	.	T	TTGTG	2880.96	PASS	AB=1.000;AC=33;AF=0.611;AN=54;BaseQRankSum=6.795;DP=693;FS=1.836;HRun=0;HaplotypeScore=240.4030;InbreedingCoeff=0.2130;MQ=54.52;MQ0=9;MQRankSum=-3.848;QD=5.38;ReadPosRankSum=-1.024;VQSLOD=2.2152;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:33,0:33:20.28:98,20,0	0/0:12,0:12:33.06:0,33,501	0/0:37,0:18:5.21:0,5,211	0/0:34,0:17:41.21:0,41,370	0/1:20,0:19:0:1,0,0	0/1:31,0:31:12:43,0,12	0/1:29,0:28:7.21:132,0,7	1/1:20,0:19:16.70:142,17,0	1/1:20,0:20:7.27:104,7,0	0/1:23,0:23:30.72:196,0,31	1/1:19,1:20:5.91:63,6,0	0/1:28,0:27:4.11:173,0,4	0/1:26,0:26:3.66:198,0,4	1/1:21,1:23:5:243,5,0	0/0:25,0:25:47.99:0,48,781	0/1:32,0:31:61.23:172,0,61	0/1:22,0:22:17.26:174,0,17	0/1:14,0:14:8.18:71,0,8	1/1:16,1:16:9.77:154,10,0	1/1:12,10:25:5.94:43,6,0	1/1:16,8:26:5.94:49,6,0	0/0:24,0:23:2.58:0,3,25	0/0:23,0:21:2.55:0,3,25	1/1:31,0:31:17.11:167,17,0	1/1:29,0:27:3.01:52,3,0	1/1:34,0:35:5.91:372,6,0	1/1:16,15:31:23.78:399,24,0	./.
chr10	49601251	.	TGC	T	2309.59	PASS	AB=0.994;AC=29;AF=0.518;AN=56;BaseQRankSum=-0.573;DP=716;FS=8.887;HRun=0;HaplotypeScore=193.6182;InbreedingCoeff=-0.0352;MQ=47.68;MQ0=16;MQRankSum=-1.679;QD=4.08;ReadPosRankSum=-4.254;VQSLOD=1.1772;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:41,0:41:36.99:268,37,0	0/0:12,0:12:18.09:0,18,487	0/1:31,0:12:27.70:28,0,86	0/0:34,0:16:8.33:0,8,203	1/1:21,0:19:2.43:25,2,0	0/1:27,0:27:34.44:34,0,98	0/1:30,0:27:64.95:65,0,140	1/1:34,1:32:70.40:548,70,0	0/1:21,0:20:14.95:15,0,56	0/1:27,0:26:60.05:60,0,295	0/0:16,0:16:3.01:0,3,40	0/1:30,0:29:26.29:41,0,26	0/1:26,0:26:68.60:69,0,145	0/1:24,0:24:17.07:17,0,98	0/0:22,0:22:51.91:0,52,884	1/1:19,12:31:36.59:464,37,0	0/1:21,0:21:3.60:4,0,127	0/1:15,0:15:43.39:43,0,131	1/1:21,1:18:5.95:236,6,0	1/1:18,1:18:13.14:90,13,0	1/1:25,2:26:18.32:125,18,0	0/1:26,0:25:16.17:41,0,16	0/0:23,0:21:2.81:0,3,25	0/0:41,0:41:20.37:0,20,182	1/1:29,0:27:11.77:95,12,0	0/1:38,0:38:99:129,0,379	0/1:23,2:25:30.48:87,0,30	0/0:2,0:2:2.97:0,3,20
chr10	49601253	.	C	CGTGCGT	2889.53	PASS	AB=0.935;AC=21;AF=0.375;AN=56;BaseQRankSum=-2.999;DP=727;FS=10.734;HRun=0;HaplotypeScore=231.8656;InbreedingCoeff=0.0900;MQ=47.13;MQ0=18;MQRankSum=-0.852;QD=7.37;ReadPosRankSum=1.669;VQSLOD=1.1489;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:35.84:0,36,292	0/0:12,0:12:33.10:0,33,668	0/0:31,0:12:18.07:0,18,172	0/0:34,0:16:30.01:0,30,261	0/0:13,8:19:2.17:0,2,22	0/1:27,0:27:34.19:84,0,34	0/1:30,0:27:95.16:116,0,95	0/0:36,0:33:34.21:0,34,369	0/1:20,0:19:15.95:85,0,16	0/1:11,14:27:81.81:565,0,82	1/1:4,10:16:3.94:26,4,0	0/1:31,0:29:42.92:43,0,57	0/1:26,0:26:88.12:138,0,88	1/1:18,4:23:11.97:255,12,0	0/0:22,0:23:65.70:0,66,1320	0/0:32,0:31:15.20:0,15,256	1/1:20,1:21:16.97:493,17,0	0/1:16,0:16:40.07:211,0,40	0/1:22,0:18:90.05:90,0,169	0/0:19,0:18:11.41:0,11,76	0/0:28,0:27:19.42:0,19,135	0/0:27,0:26:2.38:0,2,24	0/1:22,0:20:0.26:0,0,0	1/1:43,0:43:26.42:230,26,0	0/0:12,16:28:8.79:0,9,72	0/1:19,14:38:99:622,0,205	0/1:27,0:27:82.87:83,0,94	1/1:2,0:2:2.97:20,3,0
chr10	49601255	.	T	TGC	1523.84	PASS	AB=0.850;AC=20;AF=0.357;AN=56;BaseQRankSum=-0.012;DP=723;FS=10.176;HRun=0;HaplotypeScore=205.0723;InbreedingCoeff=-0.1185;MQ=46.42;MQ0=18;MQRankSum=1.389;QD=3.53;ReadPosRankSum=4.264;VQSLOD=1.7497;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:43,0:43:16.04:16,0,109	0/0:11,0:11:33.10:0,33,482	0/0:31,0:12:22.99:0,23,228	0/0:32,0:13:32.92:0,33,311	0/0:19,0:17:2.40:0,2,23	0/1:12,15:27:56.12:70,0,56	0/1:17,13:27:99:143,0,137	0/0:38,0:35:92.03:0,92,640	0/1:9,12:20:14.94:77,0,15	0/1:26,0:25:86.49:237,0,86	1/1:16,1:17:3.01:58,3,0	0/1:19,12:29:40.56:41,0,55	0/1:15,10:25:99:133,0,117	0/1:22,1:23:44.39:93,0,44	0/0:23,0:23:65.93:0,66,930	0/0:31,0:30:37.93:0,38,340	1/1:20,0:20:2.58:171,3,0	0/1:17,0:17:87.12:87,0,101	0/0:22,0:18:27.66:0,28,244	0/1:19,0:18:5.43:5,0,73	0/1:28,0:27:16.51:17,0,115	0/0:12,15:26:5.71:0,6,49	0/1:5,15:21:0.12:0,0,0	1/1:39,4:43:22.62:217,23,0	0/0:30,0:28:14.86:0,15,118	0/1:36,0:37:99:306,0,263	0/0:26,0:26:21.94:0,22,177	0/1:2,0:2:13.96:14,0,14
chr10	49601268	.	G	GTC	4283.64	PASS	AB=0.970;AC=37;AF=0.661;AN=56;BaseQRankSum=-1.953;DP=739;FS=3.104;HRun=0;HaplotypeScore=192.5358;InbreedingCoeff=-0.0632;MQ=47.06;MQ0=16;MQRankSum=1.854;QD=6.35;ReadPosRankSum=0.871;VQSLOD=4.6897;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,37:46:17.86:297,18,0	0/0:10,0:10:27.81:0,28,139	0/0:25,0:14:32.38:0,32,267	0/0:29,0:16:44.97:0,45,421	1/1:20,0:17:5.69:45,6,0	0/1:24,0:24:35.16:144,0,35	1/1:30,0:27:37.21:265,37,0	0/1:48,0:45:92.43:543,0,92	1/1:24,0:23:13.37:88,13,0	0/1:24,0:23:99:251,0,100	1/1:15,0:15:8.79:64,9,0	1/1:31,0:29:29.81:249,30,0	1/1:30,0:30:39.56:334,40,0	0/1:26,0:26:22.74:95,0,23	0/1:29,0:29:91.55:92,0,157	0/1:32,0:31:43.19:43,0,74	0/1:17,1:18:31.26:161,0,31	1/1:17,0:17:1.33:185,1,0	0/1:25,0:21:54.61:55,0,95	0/1:18,0:17:5.08:70,0,5	1/1:33,0:32:8.92:207,9,0	1/1:27,0:26:11.98:99,12,0	1/1:19,0:17:5.98:47,6,0	0/1:20,20:41:12.95:101,0,13	1/1:37,0:35:35.69:284,36,0	0/1:31,0:31:99:317,0,102	0/1:24,0:24:7.83:162,0,8	0/1:6,0:6:4.97:86,0,5
chr10	49602495	.	GC	G	800.64	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.098;DP=666;FS=3.876;HRun=2;HaplotypeScore=101.9507;InbreedingCoeff=0.9988;MQ=89.25;MQ0=0;MQRankSum=-3.469;QD=32.03;ReadPosRankSum=1.690;VQSLOD=3.4402;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,25:25:69.22:896,69,0	0/0:9,0:9:27.09:0,27,404	0/0:28,0:28:81.09:0,81,1082	0/0:22,0:22:54.18:0,54,790	0/0:27,0:27:75.25:0,75,1119	0/0:28,0:28:84.27:0,84,1232	0/0:22,0:22:63.20:0,63,925	0/0:26,0:26:75.22:0,75,1100	0/0:22,0:22:66.22:0,66,987	0/0:22,0:22:66.22:0,66,975	0/0:29,0:29:84.26:0,84,1219	0/0:24,0:24:72.24:0,72,1061	0/0:32,0:32:96.33:0,96,1438	0/0:28,0:28:84.26:0,84,1218	0/0:26,0:26:72.23:0,72,1059	0/0:18,0:18:54.17:0,54,790	0/0:31,0:31:93.32:0,93,1394	0/0:37,1:38:98.73:0,99,1619	0/0:21,0:21:63.20:0,63,913	0/0:27,0:27:78.25:0,78,1149	0/0:17,0:17:48.15:0,48,700	0/0:21,0:21:63.20:0,63,923	0/0:28,0:28:81.27:0,81,1213	0/0:23,0:23:69.23:0,69,1031	0/0:20,0:20:60.20:0,60,897	0/0:23,0:23:69.23:0,69,1015	0/0:17,0:16:51.17:0,51,757	0/0:12,0:12:36.12:0,36,539
chr10	49603864	.	TATATATATATATATATATATATATATATATATATATATATTC	T	16874.71	PASS	AB=0.713;AC=31;AF=0.596;AN=52;BaseQRankSum=7.656;DP=275;FS=7.203;HRun=0;HaplotypeScore=180.7540;InbreedingCoeff=0.6226;MQ=61.42;MQ0=3;MQRankSum=-2.528;QD=72.42;ReadPosRankSum=4.785;VQSLOD=3.1153;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:6:12.01:0,12,237	0/0:3,0:3:9.03:0,9,269	0/1:5,0:5:0.99:1,0,84	0/0:10,0:4:5.99:0,6,94	1/1:0,25:25:21:1257,21,0	1/1:0,15:15:9.03:984,9,0	1/1:1,0:1:3:25,3,0	0/0:8,0:8:24.08:0,24,1564	1/1:0,17:17:12.04:1312,12,0	1/1:0,22:22:44.81:2323,45,0	1/1:0,15:15:12.04:1006,12,0	1/1:0,19:19:12.04:1311,12,0	1/1:0,17:17:9.03:984,9,0	1/1:0,12:12:8.56:980,9,0	0/0:5,0:5:9.03:0,9,211	./.	1/1:1,16:16:9.03:714,9,0	0/1:2,3:5:34.67:322,0,35	0/0:5,0:5:15.05:0,15,1285	0/0:3,0:3:9.02:0,9,200	0/0:1,0:1:3.01:0,3,72	0/1:1,16:17:0.99:1333,0,1	1/1:0,16:16:15.05:1571,15,0	./.	1/1:0,11:11:6.02:656,6,0	1/1:0,13:13:23.96:1111,24,0	0/0:1,0:1:3.01:0,3,366	1/1:1,5:5:9.03:984,9,0
chr10	49603904	.	TTC	T	1246.33	PASS	AB=0.500;AC=31;AF=0.574;AN=54;BaseQRankSum=8.825;DP=306;FS=49.632;HRun=0;HaplotypeScore=127.4085;InbreedingCoeff=0.7655;MQ=68.63;MQ0=0;MQRankSum=-6.769;QD=5.33;ReadPosRankSum=7.157;VQSLOD=0.8644;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:5:12.04:0,12,185	0/0:4,0:4:12.04:0,12,172	0/0:7,0:6:18.06:0,18,287	0/0:13,0:9:5.10:0,5,177	1/1:25,0:25:12:118,12,0	1/1:15,0:15:8.98:72,9,0	./.	0/0:12,0:12:33.10:0,33,594	1/1:17,0:17:11.97:96,12,0	1/1:22,0:22:32.93:325,33,0	1/1:15,0:15:5.99:48,6,0	1/1:19,0:19:11.97:95,12,0	1/1:17,0:17:8.98:72,9,0	1/1:12,0:12:8.96:69,9,0	0/0:4,0:4:9.02:0,9,126	0/0:3,0:3:9.03:0,9,155	1/1:16,0:16:5.99:48,6,0	1/1:4,0:4:2.99:24,3,0	0/0:4,0:4:12.04:0,12,198	0/0:2,0:2:6.02:0,6,103	0/0:2,0:2:6.02:0,6,103	1/1:17,0:17:8.97:71,9,0	1/1:16,0:16:14.98:132,15,0	0/1:0,10:10:0:0,0,0	1/1:11,0:11:5.99:48,6,0	1/1:13,0:13:17.92:150,18,0	0/0:7,0:7:21.07:0,21,339	1/1:5,0:5:8.98:72,9,0
chr10	49605408	.	TTA	T	7645.72	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=13.531;DP=808;FS=0.000;HRun=0;HaplotypeScore=100.3280;InbreedingCoeff=0.9998;MQ=88.25;MQ0=0;MQRankSum=-6.172;QD=43.44;ReadPosRankSum=0.680;VQSLOD=6.2428;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,157,2960	0/0:10,0:10:30.08:0,30,544	0/0:30,0:30:81.23:0,81,1446	0/0:30,0:30:87.30:0,87,1564	0/0:14,0:14:36.11:0,36,654	0/0:19,0:19:57.16:0,57,1013	0/0:34,0:34:99:0,102,1893	1/1:0,43:43:99:1888,129,0	0/0:33,0:33:96.27:0,96,1734	0/0:31,0:31:93.32:0,93,1785	0/0:17,0:17:51.17:0,51,965	0/0:37,0:37:99:0,108,2077	0/0:35,0:35:99:0,102,1924	0/0:28,0:28:81.26:0,81,1506	0/0:56,0:56:99:0,163,3023	1/1:0,34:34:99:1516,99,0	0/0:27,0:27:78.25:0,78,1455	0/0:20,0:20:60.21:0,60,1157	1/1:1,18:19:54.18:824,54,0	1/1:0,26:26:75.22:1123,75,0	1/1:0,30:30:87.30:1332,87,0	0/0:26,0:26:72.25:0,72,1378	0/0:25,0:25:75.26:0,75,1448	0/0:45,0:45:99:0,126,2385	0/0:24,0:24:72.23:0,72,1347	0/0:25,0:25:75.24:0,75,1375	1/1:0,24:24:63.21:963,63,0	0/0:12,0:12:36.12:0,36,693
chr10	49605627	.	CT	C	1282.41	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=1.698;DP=703;FS=5.655;HRun=4;HaplotypeScore=294.3043;InbreedingCoeff=0.9730;MQ=71.54;MQ0=0;MQRankSum=4.604;QD=26.17;ReadPosRankSum=3.039;VQSLOD=1.2412;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,42:49:99:1377,121,0	0/0:13,0:13:39.12:0,39,530	0/0:18,0:18:13.98:0,14,498	0/0:21,0:21:47.90:0,48,580	0/0:34,0:34:94.25:0,94,1204	0/0:23,0:23:63.21:0,63,874	0/0:20,0:20:48.13:0,48,650	0/0:35,0:35:99:0,102,1397	0/0:31,0:31:87.19:0,87,1152	0/0:31,0:31:80.04:0,80,1055	0/0:29,0:29:69.14:0,69,917	0/0:29,0:29:72.23:0,72,989	0/0:29,0:29:78.26:0,78,1078	0/0:18,0:18:45.11:0,45,607	0/0:32,0:32:90.27:0,90,1226	0/0:25,0:25:69.23:0,69,960	0/0:21,0:21:37.94:0,38,504	0/0:9,0:9:19.88:0,20,257	0/0:34,0:34:90.30:0,90,1256	0/0:31,0:31:81.22:0,81,1095	0/0:17,0:16:30.06:0,30,398	0/0:25,0:25:63.16:0,63,842	0/0:17,0:17:41.98:0,42,500	0/0:18,0:18:24.82:0,25,450	0/0:26,0:26:72.24:0,72,1006	0/0:22,0:22:66.18:0,66,898	0/0:31,0:30:81.25:0,81,1108	0/0:15,0:15:42.14:0,42,587
chr10	49605644	.	G	GGAAGAAGCTGCTCAGA	107182.97	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-10.315;DP=784;FS=4.433;HRun=0;HaplotypeScore=301.9888;InbreedingCoeff=0.9893;MQ=68.40;MQ0=1;MQRankSum=-14.891;QD=164.64;ReadPosRankSum=2.213;VQSLOD=4.2868;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,138,5869	0/0:12,0:12:36.12:0,36,1649	0/0:22,0:22:31.42:0,31,2115	0/0:22,0:22:51.15:0,51,1802	1/1:16,16:36:78.01:5354,78,0	1/1:15,12:30:72.25:5190,72,0	1/1:24,8:33:90.31:6676,90,0	1/1:36,1:40:99:6737,117,0	1/1:14,19:36:93.32:6891,93,0	1/1:16,12:30:84.28:5641,84,0	1/1:13,11:28:66.23:4026,66,0	1/1:21,14:38:93.32:6746,93,0	1/1:16,11:32:78.27:5184,78,0	1/1:7,11:22:48.16:3770,48,0	0/0:27,0:27:75.24:0,75,3394	1/1:13,16:36:84.29:6032,84,0	1/1:7,9:22:42.14:2950,42,0	1/1:6,5:11:33.11:2342,33,0	1/1:21,8:33:90.26:4980,90,0	1/1:17,13:36:75.21:4738,75,0	1/1:11,2:15:10.22:1197,10,0	1/1:20,6:30:60.12:3734,60,0	1/1:13,8:21:63.17:3840,63,0	1/1:10,6:17:33.11:2340,33,0	1/1:13,17:32:78.27:5647,78,0	1/1:9,11:24:63.22:4005,63,0	1/1:13,15:32:78.27:5808,78,0	1/1:3,12:15:45.15:3353,45,0
chr10	49605762	.	TG	T	5942.55	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=8.848;DP=740;FS=1.501;HRun=1;HaplotypeScore=76.6568;InbreedingCoeff=0.9919;MQ=79.93;MQ0=0;MQRankSum=-2.276;QD=39.88;ReadPosRankSum=0.298;VQSLOD=5.3632;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,138,2161	0/0:7,0:7:21.06:0,21,311	0/0:25,0:25:71.58:0,72,1048	0/0:15,0:15:42.02:0,42,649	0/0:26,0:26:78.25:0,78,1221	0/0:36,0:36:99:0,108,1722	0/0:26,0:26:75.25:0,75,1186	1/1:0,26:26:78.26:1090,78,0	0/0:24,0:24:72.23:0,72,1125	0/0:37,0:37:99:0,111,1743	0/0:27,0:27:81.26:0,81,1270	0/0:21,0:21:60.20:0,60,955	0/0:25,0:25:75.22:0,75,1144	0/0:24,0:24:69.23:0,69,1087	0/0:40,0:40:99:0,120,1865	0/0:19,0:19:57.19:0,57,910	0/0:30,0:30:87.25:0,87,1329	0/0:19,0:19:54.18:0,54,863	1/1:0,31:31:90.30:1256,90,0	1/1:0,23:23:69.23:954,69,0	1/1:0,43:43:99:1636,117,0	0/0:21,0:21:63.21:0,63,1005	0/0:23,0:23:69.21:0,69,1077	0/0:39,0:39:99:0,105,1599	0/0:23,0:23:69.24:0,69,1103	0/0:32,0:32:96.33:0,96,1531	1/1:0,26:26:72.24:1006,72,0	0/0:4,0:4:12.04:0,12,188
chr10	49606282	.	CT	C	17130.08	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=14.532;DP=773;FS=0.881;HRun=2;HaplotypeScore=76.1270;InbreedingCoeff=0.9954;MQ=83.35;MQ0=0;MQRankSum=-4.676;QD=35.10;ReadPosRankSum=3.450;VQSLOD=5.3343;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,57:58:99:2065,159,0	0/0:14,0:14:39.10:0,39,543	0/0:23,0:23:66.21:0,66,956	0/0:29,0:29:87.29:0,87,1271	1/1:0,27:27:72.23:933,72,0	1/1:0,21:21:63.20:818,63,0	1/1:0,26:26:72.23:935,72,0	0/0:19,0:19:57.19:0,57,837	1/1:0,24:24:72.23:935,72,0	1/1:2,25:27:69.20:869,69,0	1/1:1,19:20:51.17:662,51,0	1/1:1,31:32:81.26:1052,81,0	1/1:0,31:31:90.29:1168,90,0	1/1:0,24:24:63.20:818,63,0	0/0:36,0:36:99:0,105,1552	0/0:31,1:32:57.36:0,57,1335	1/1:0,43:43:99:1558,120,0	1/1:0,28:28:75.20:973,75,0	0/0:28,0:28:81.22:0,81,1167	0/0:29,0:29:81.24:0,81,1157	0/0:47,0:47:99:0,138,2069	1/1:0,30:30:78.25:1012,78,0	1/1:0,17:17:45.15:584,45,0	1/1:0,35:35:93.30:1208,93,0	1/1:0,17:17:45.15:584,45,0	1/1:1,23:24:63.19:801,63,0	0/0:28,0:28:84.28:0,84,1259	1/1:0,4:4:12.04:156,12,0
chr10	49608139	.	ACT	A	17804	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=7.332;DP=630;FS=3.994;HRun=0;HaplotypeScore=104.8582;InbreedingCoeff=0.9825;MQ=81.26;MQ0=2;MQRankSum=-7.088;QD=33.85;ReadPosRankSum=4.309;VQSLOD=6.9353;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:60.01:0,60,999	0/0:4,0:4:9.03:0,9,154	0/0:33,0:29:62.02:0,62,1161	0/0:19,0:18:36.03:0,36,470	1/1:4,28:32:84.20:1067,84,0	1/1:1,26:27:66.21:868,66,0	1/1:2,17:19:48.16:630,48,0	1/1:2,17:19:51.16:657,51,0	1/1:1,22:23:60.20:789,60,0	1/1:2,23:25:72.23:945,72,0	1/1:4,23:27:75.20:964,75,0	1/1:2,27:29:78.25:1023,78,0	1/1:1,18:19:48.16:631,48,0	1/1:0,32:31:90.29:1183,90,0	0/0:25,0:25:66.21:0,66,1101	1/1:0,21:21:57.19:749,57,0	1/1:5,14:19:51.16:662,51,0	1/1:1,17:18:48.16:630,48,0	1/1:4,17:21:51.14:640,51,0	1/1:4,26:30:75.18:947,75,0	1/1:1,13:13:30.10:394,30,0	1/1:4,16:20:48.09:611,48,0	1/1:3,19:22:51.12:670,51,0	1/1:0,11:11:33.11:434,33,0	1/1:2,26:28:75.24:985,75,0	1/1:2,16:18:51.17:670,51,0	1/1:4,41:45:99:1459,111,0	1/1:0,7:7:15.05:197,15,0
chr10	49608731	.	GT	G	7702.95	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=10.517;DP=756;FS=6.489;HRun=11;HaplotypeScore=95.6303;InbreedingCoeff=0.9986;MQ=81.76;MQ0=2;MQRankSum=0.210;QD=18.38;ReadPosRankSum=5.912;VQSLOD=5.0281;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:47,2:48:99:0,105,1272	0/0:8,0:8:21.05:0,21,224	0/0:44,3:36:44.50:0,44,433	0/0:34,1:27:20.10:0,20,174	1/1:4,38:42:99:860,108,0	1/1:5,16:21:38.94:320,39,0	1/1:5,19:25:55.94:449,56,0	0/0:35,1:37:74.18:0,74,805	1/1:3,24:27:62.54:517,63,0	1/1:3,28:31:74.89:616,75,0	1/1:2,22:24:51.37:419,51,0	1/1:5,22:28:52.96:424,53,0	1/1:6,15:21:38.94:320,39,0	1/1:2,25:27:59.90:492,60,0	0/0:36,1:37:57.44:0,57,805	0/0:24,0:24:72.13:0,72,748	1/1:4,20:24:44.92:369,45,0	1/1:2,13:15:38.93:319,39,0	0/0:27,0:27:60.08:0,60,600	0/0:25,0:25:54.14:0,54,576	0/0:26,1:27:35.50:0,35,576	1/1:1,11:12:32.95:270,33,0	1/1:5,20:25:56.82:467,57,0	1/1:3,19:22:53.93:443,54,0	1/1:4,16:21:46.97:375,47,0	1/1:7,34:41:40.88:746,41,0	0/0:21,0:21:45.07:0,45,466	1/1:1,12:13:35.96:296,36,0
chr10	49608960	.	T	TTTTTTG	3661.82	PASS	AB=0.985;AC=27;AF=0.482;AN=56;BaseQRankSum=4.796;DP=569;FS=36.123;HRun=0;HaplotypeScore=146.4888;InbreedingCoeff=-0.2234;MQ=43.12;MQ0=11;MQRankSum=-2.967;QD=7.79;ReadPosRankSum=-0.816;VQSLOD=1.1234;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:22:81.24:81,0,82	0/0:5,0:5:8.98:0,9,74	0/0:18,0:7:20.96:0,21,242	0/0:13,0:8:10.87:0,11,136	0/1:40,0:37:99:125,0,134	1/1:20,0:18:7.99:277,8,0	0/1:28,0:20:8.95:199,0,9	0/0:36,0:32:11.36:0,11,288	1/1:18,0:15:20.13:262,20,0	0/1:24,0:23:83.90:260,0,84	0/1:20,0:19:58.38:82,0,58	0/1:12,6:18:67.78:155,0,68	0/1:20,0:20:25.88:422,0,26	0/1:15,0:14:19.11:265,0,19	0/0:20,0:20:53.77:0,54,464	1/1:18,0:14:2.05:127,2,0	0/1:24,0:20:89.77:96,0,90	0/1:9,0:8:54.85:55,0,74	0/1:25,0:21:13.16:13,0,215	0/1:17,0:16:6.62:7,0,137	0/0:7,0:6:14.03:0,14,84	1/1:20,0:18:18.65:327,19,0	1/1:21,0:17:19.52:208,20,0	0/1:15,0:15:29.15:101,0,29	0/1:26,0:22:81.72:159,0,82	0/1:30,0:28:79.08:272,0,79	0/1:25,0:23:10.83:11,0,276	0/1:15,0:14:3.16:157,0,3
chr10	49610612	.	G	GGTCACTTACCTGATAATTCTGAATGT	1841.08	PASS	AB=0.715;AC=26;AF=0.929;AN=28;BaseQRankSum=-2.199;DP=41;FS=8.783;HRun=0;HaplotypeScore=36.7185;InbreedingCoeff=-0.2036;MQ=141.86;MQ0=0;MQRankSum=-1.674;QD=55.79;ReadPosRankSum=-0.821;VQSLOD=0.4371;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/1:1,1:5:0.01:941,0,0	0/1:6,0:7:31.72:92,0,32	1/1:2,0:2:3.01:120,3,0	1/1:3,0:3:3.01:119,3,0	./.	1/1:2,0:2:6.02:130,6,0	./.	1/1:1,0:1:3.01:121,3,0	./.	1/1:1,0:1:3.01:40,3,0	./.	./.	1/1:1,0:1:3.01:73,3,0	1/1:1,0:1:2.97:20,3,0	1/1:1,0:1:3.01:44,3,0	./.	1/1:1,0:1:2.80:13,3,0	./.	./.	1/1:3,0:3:5.99:71,6,0	./.	1/1:1,0:1:3:25,3,0	1/1:4,0:4:8.95:113,9,0	./.	./.	./.
chr10	49616272	.	GA	G	950.88	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.045;DP=736;FS=0.778;HRun=2;HaplotypeScore=73.2808;InbreedingCoeff=0.9977;MQ=88.89;MQ0=0;MQRankSum=-0.960;QD=33.96;ReadPosRankSum=1.681;VQSLOD=4.0305;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:57:99:0,163,2520	0/0:11,0:11:33.11:0,33,528	0/0:23,0:23:69.24:0,69,1100	0/0:37,0:37:99:0,106,1607	0/0:27,0:27:81.26:0,81,1265	0/0:28,0:27:81.28:0,81,1295	0/0:27,0:27:81.28:0,81,1289	0/0:37,0:37:99:0,102,1589	0/0:29,0:29:87.28:0,87,1366	0/0:29,0:29:87.30:0,87,1391	0/0:9,0:9:27.09:0,27,431	1/1:0,28:28:75.25:1046,75,0	0/0:27,0:27:75.26:0,75,1199	0/0:25,0:25:75.21:0,75,1134	0/0:28,0:28:84.24:0,84,1271	0/0:32,0:32:87.30:0,87,1391	0/0:33,0:33:92.15:0,92,1460	0/0:14,0:14:42.14:0,42,672	0/0:20,0:20:60.20:0,60,939	0/0:17,0:17:51.17:0,51,815	0/0:40,0:40:99:0,114,1808	0/0:25,0:25:75.26:0,75,1199	0/0:21,0:21:63.20:0,63,984	0/0:38,0:38:99:0,114,1794	0/0:15,0:15:45.15:0,45,720	0/0:20,0:20:60.19:0,60,936	0/0:30,0:30:87.27:0,87,1343	0/0:9,0:9:27.09:0,27,432
chr10	49616391	.	T	TAC	2370.29	PASS	AB=0.746;AC=39;AF=0.780;AN=50;BaseQRankSum=0.452;DP=677;FS=1.076;HRun=0;HaplotypeScore=134.5564;InbreedingCoeff=-0.0149;MQ=67.93;MQ0=7;MQRankSum=-1.191;QD=4.23;ReadPosRankSum=0.656;VQSLOD=2.3097;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:48,0:48:20.79:181,21,0	0/1:9,3:12:23.02:79,0,23	./.	./.	1/1:18,0:17:2.99:24,3,0	0/1:13,8:20:3.74:161,0,4	0/1:20,4:27:2.23:120,0,2	1/1:27,0:27:11.02:63,11,0	1/1:23,2:25:12.02:156,12,0	1/1:21,0:21:22.60:185,23,0	./.	1/1:12,1:13:6.22:88,6,0	0/1:15,9:24:33.57:76,0,34	1/1:22,0:25:5.99:49,6,0	0/1:13,7:22:17.01:161,0,17	0/1:20,13:34:26.04:36,0,26	1/1:24,0:24:29.64:251,30,0	1/1:19,0:19:11.95:72,12,0	0/0:23,0:23:1.69:0,2,10	1/1:20,0:19:3:26,3,0	1/1:31,0:31:6:58,6,0	1/1:24,6:30:6.02:88,6,0	0/0:19,0:19:5.89:0,6,52	0/1:26,13:42:44.24:236,0,44	1/1:20,0:20:3.01:41,3,0	1/1:26,0:26:23.55:175,24,0	1/1:27,0:27:20.84:154,21,0	1/1:3,2:4:2.99:24,3,0
chr10	49616722	.	TG	T	2532.21	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=-1.151;DP=676;FS=1.319;HRun=9;HaplotypeScore=150.1774;InbreedingCoeff=0.8351;MQ=69.86;MQ0=12;MQRankSum=-0.439;QD=15.73;ReadPosRankSum=0.373;VQSLOD=2.2241;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:77.12:0,77,407	0/0:9,0:9:22.34:0,22,149	0/0:20,0:18:38.89:0,39,387	0/0:32,0:30:26.35:0,26,476	0/0:7,0:20:12.95:0,13,118	0/0:1,0:16:28.45:0,28,157	0/0:3,0:21:31.40:0,31,163	1/1:11,17:23:47.07:400,47,0	0/0:4,0:25:40.97:0,41,196	0/0:5,0:18:16.29:0,16,124	0/1:4,0:16:1.80:2,0,8	0/0:5,0:23:25.52:0,26,124	0/0:1,0:23:39.80:0,40,198	0/0:8,0:14:5.49:0,5,30	0/0:29,0:29:80.07:0,80,519	0/0:35,0:35:88.62:0,89,538	0/0:4,0:38:50.68:0,51,251	0/0:5,0:20:28.58:0,29,150	1/1:0,9:8:24.01:219,24,0	1/1:2,17:22:45:412,45,0	1/1:6,45:49:99:932,102,0	0/0:3,0:17:6.70:0,7,48	0/0:5,0:18:12.75:0,13,104	0/0:6,0:39:54.34:0,54,283	0/0:4,0:18:22.82:0,23,135	0/0:5,0:20:9.10:0,9,138	1/1:3,28:30:81.01:741,81,0	0/0:2,0:5:2.84:0,3,14
chr10	49616726	.	G	GA	336.26	PASS	AB=0.692;AC=1;AF=0.018;AN=56;BaseQRankSum=1.323;DP=654;FS=3.958;HRun=0;HaplotypeScore=148.0889;InbreedingCoeff=-0.0386;MQ=70.71;MQ0=12;MQRankSum=-2.489;QD=7.47;ReadPosRankSum=-1.444;VQSLOD=2.9510;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:25,20:45:99:410,0,137	0/0:10,0:10:30.04:0,30,365	0/0:19,0:16:43.34:0,43,514	0/0:33,0:30:46.70:0,47,780	0/0:20,0:19:24.98:0,25,196	0/0:16,0:16:20.34:0,20,128	0/0:18,0:17:13.08:0,13,88	0/0:30,0:23:61.21:0,61,366	0/0:26,0:25:39.88:0,40,175	0/0:17,0:17:1.86:0,2,147	0/0:13,0:13:14.40:0,14,95	0/0:21,0:21:20.21:0,20,81	0/0:25,0:25:34.67:0,35,151	0/0:11,0:11:9.32:0,9,61	0/0:34,0:34:93.23:0,93,1198	0/0:34,0:34:99:0,102,1292	0/0:36,0:35:46.18:0,46,211	0/0:16,0:16:24.79:0,25,119	0/0:9,0:8:23.39:0,23,141	0/0:22,0:22:50.04:0,50,315	0/0:52,0:49:99:0,108,672	0/0:17,0:17:5.80:0,6,82	0/0:17,0:16:16.37:0,16,85	0/0:35,0:34:44.30:0,44,198	0/0:18,0:17:27.12:0,27,178	0/0:20,0:20:5.99:0,6,197	0/0:33,0:31:85.31:0,85,533	0/0:7,0:7:14.32:0,14,99
chr10	49616730	.	G	GGGGA	1642.06	PASS	AB=1.000;AC=12;AF=0.214;AN=56;BaseQRankSum=5.893;DP=658;FS=0.000;HRun=0;HaplotypeScore=176.7500;InbreedingCoeff=-0.0694;MQ=70.21;MQ0=12;MQRankSum=-3.131;QD=6.27;ReadPosRankSum=4.558;VQSLOD=2.5570;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:24,20:44:99:1490,108,0	0/0:10,0:10:30.05:0,30,455	0/0:19,0:16:31.28:0,31,544	0/0:28,0:26:61.54:0,62,867	0/0:20,0:19:14.38:0,14,214	0/1:18,0:18:21.95:22,0,122	0/1:15,0:14:21.69:22,0,35	0/0:28,0:21:60.08:0,60,604	0/1:26,0:25:44.16:44,0,50	0/0:18,0:18:16.10:0,16,136	0/0:11,0:11:14.19:0,14,100	0/1:18,0:18:31.25:31,0,53	0/1:24,0:24:38.67:71,0,39	0/1:12,0:12:23.01:23,0,51	0/0:37,0:37:99:0,108,1629	0/0:38,0:38:99:0,108,1696	0/1:36,0:35:37.59:54,0,38	0/1:15,0:15:9.88:10,0,54	0/0:9,0:8:24.06:0,24,254	0/0:23,0:23:47.99:0,48,508	0/0:54,0:51:99:0,121,1243	0/0:17,0:17:3.15:0,3,76	0/1:18,0:17:4.05:4,0,53	0/1:36,0:35:22.99:23,0,73	0/0:20,0:19:11.05:0,11,197	0/0:20,0:20:13.57:0,14,268	0/0:35,0:33:93.19:0,93,970	0/0:9,0:9:11.21:0,11,92
chr10	49617254	.	GA	G	1056.05	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=1.910;DP=702;FS=5.559;HRun=4;HaplotypeScore=84.1714;InbreedingCoeff=0.9976;MQ=85.24;MQ0=0;MQRankSum=-4.709;QD=28.54;ReadPosRankSum=-0.561;VQSLOD=3.1135;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,37:37:96.29:1151,96,0	0/0:14,0:14:39.13:0,39,546	0/0:27,0:27:66.12:0,66,842	0/0:17,0:17:45.13:0,45,591	0/0:27,0:27:78.24:0,78,1073	0/0:33,0:33:93.28:0,93,1268	0/0:24,0:24:72.22:0,72,974	0/0:35,0:35:99:0,102,1414	0/0:19,0:19:54.15:0,54,722	0/0:27,0:27:78.25:0,78,1064	0/0:22,0:22:66.18:0,66,862	0/0:30,0:30:84.26:0,84,1144	0/0:21,0:21:60.20:0,60,840	0/0:24,0:24:69.21:0,69,933	0/0:22,0:22:66.20:0,66,891	0/0:29,0:29:81.25:0,81,1094	0/0:19,0:19:51.17:0,51,713	0/0:13,0:13:33.10:0,33,445	0/0:28,0:28:81.26:0,81,1118	0/0:40,0:40:99:0,114,1516	0/0:25,0:25:71.44:0,71,955	0/0:32,0:32:96.29:0,96,1295	0/0:23,0:23:69.23:0,69,966	0/0:17,0:17:48.15:0,48,655	0/0:30,0:30:90.27:0,90,1200	0/0:30,0:30:81.26:0,81,1120	0/0:29,0:29:84.26:0,84,1155	0/0:8,0:8:24.08:0,24,336
chr10	49617491	.	A	AGTTT	1054.66	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-0.105;DP=681;FS=5.383;HRun=0;HaplotypeScore=112.1496;InbreedingCoeff=0.9990;MQ=78.95;MQ0=0;MQRankSum=-3.407;QD=62.04;ReadPosRankSum=0.463;VQSLOD=5.6257;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,114,2248	0/0:11,0:11:33.09:0,33,616	0/0:18,0:18:45.15:0,45,929	0/0:15,0:15:42.10:0,42,835	0/0:29,0:29:87.28:0,87,1786	0/0:23,0:23:66.23:0,66,1382	0/0:17,0:17:48.15:0,48,937	0/0:28,0:28:84.29:0,84,1750	0/0:21,0:21:63.22:0,63,1321	0/0:25,0:25:75.12:0,75,1484	0/0:20,0:20:60.20:0,60,1222	0/0:28,0:28:81.27:0,81,1634	0/0:26,0:26:78.22:0,78,1585	0/0:29,0:29:87.30:0,87,1815	0/0:38,0:38:99:0,111,2311	1/1:2,14:17:42.11:1150,42,0	0/0:33,0:33:99:0,99,2075	0/0:12,0:12:36.12:0,36,753	0/0:24,0:24:72.22:0,72,1435	0/0:24,0:24:72.23:0,72,1457	0/0:27,0:27:78.25:0,78,1597	0/0:28,0:28:78.27:0,78,1634	0/0:22,0:22:66.21:0,66,1346	0/0:17,0:17:51.16:0,51,1032	0/0:30,0:30:90.30:0,90,1850	0/0:34,0:34:99:0,102,2100	0/0:35,0:35:99:0,99,1919	0/0:12,0:11:30.10:0,30,613
chr10	49618902	.	T	TACAC	2680.42	PASS	AB=0.905;AC=37;AF=0.841;AN=44;BaseQRankSum=-2.952;DP=326;FS=1.664;HRun=0;HaplotypeScore=75.5083;InbreedingCoeff=0.2262;MQ=56.84;MQ0=15;MQRankSum=0.603;QD=11.26;ReadPosRankSum=-1.196;VQSLOD=2.8466;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:20:3:0,3,28	./.	./.	./.	1/1:8,5:14:6.02:139,6,0	./.	1/1:18,0:16:6.02:113,6,0	1/1:32,0:30:7.27:81,7,0	1/1:12,0:13:9.01:132,9,0	1/1:5,4:11:21.01:349,21,0	1/1:6,5:12:6.02:140,6,0	1/1:9,0:9:5.27:120,5,0	1/1:6,0:6:6.49:131,6,0	0/1:6,1:9:0:0,0,0	1/1:10,0:11:3.01:52,3,0	0/0:5,0:5:6.01:0,6,59	1/1:9,5:18:14.79:286,15,0	1/1:8,4:12:15.22:341,15,0	1/1:4,0:4:3.01:59,3,0	0/1:8,0:7:20.83:33,0,21	./.	./.	1/1:5,0:5:5.99:50,6,0	0/1:8,0:8:34.37:34,0,38	1/1:12,0:18:8.97:102,9,0	1/1:4,0:4:3:25,3,0	1/1:9,0:7:8.37:68,8,0	1/1:5,6:13:26.83:542,27,0
chr10	49620698	.	A	ATGGGGATGTGTGTGTGTG	13809.83	PASS	AB=0.727;AC=29;AF=0.518;AN=56;BaseQRankSum=7.922;DP=805;FS=4.349;HRun=0;HaplotypeScore=300.0390;InbreedingCoeff=-0.6796;MQ=55.17;MQ0=8;MQRankSum=-10.648;QD=18.74;ReadPosRankSum=1.874;VQSLOD=2.6947;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:38:67.46:67,0,609	0/1:12,0:12:49.70:295,0,50	0/0:35,0:22:46.61:0,47,914	0/0:33,0:22:41.82:0,42,1268	0/1:3,1:24:64.16:133,0,64	0/1:4,0:37:6.94:894,0,7	0/1:39,0:39:99:1673,0,188	0/1:29,0:43:99:850,0,1014	0/1:4,0:26:40.40:215,0,40	0/1:34,0:33:99:1567,0,259	1/1:0,0:14:3.01:225,3,0	0/1:7,0:38:99:426,0,131	0/1:2,0:30:9.97:559,0,10	0/1:5,0:37:65.63:213,0,66	0/1:29,0:27:99:400,0,608	0/1:15,0:25:99:431,0,393	1/1:2,0:15:9.03:489,9,0	0/1:9,0:22:20.44:609,0,20	0/1:15,0:22:99:421,0,353	0/1:15,0:29:99:213,0,278	0/1:38,0:38:67.03:67,0,750	0/1:2,0:27:43.66:159,0,44	1/1:1,0:28:3.01:143,3,0	0/1:20,0:20:54.01:281,0,54	0/1:33,0:32:99:1239,0,141	0/1:5,0:34:99:1295,0,114	0/1:9,0:18:35.26:35,0,463	0/1:4,0:13:27.92:911,0,28
chr10	49620702	.	G	GTA	1831.56	PASS	AB=0.965;AC=27;AF=0.482;AN=56;BaseQRankSum=5.003;DP=757;FS=11.448;HRun=0;HaplotypeScore=176.7113;InbreedingCoeff=0.0763;MQ=51.65;MQ0=9;MQRankSum=-4.341;QD=3.50;ReadPosRankSum=7.226;VQSLOD=1.3283;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:37,0:36:1.82:2,0,204	0/0:11,0:11:5.84:0,6,33	0/0:36,0:20:53.86:0,54,563	0/0:37,0:25:61.28:0,61,684	1/1:20,0:19:2.98:22,3,0	1/1:30,0:28:12.01:117,12,0	1/1:36,0:36:16.35:306,16,0	0/0:39,0:39:95.79:0,96,750	0/1:27,0:27:17.96:26,0,18	0/1:15,19:33:99:305,0,148	1/1:14,0:13:2.68:11,3,0	1/1:29,1:30:6.01:70,6,0	0/1:27,0:26:29.15:80,0,29	0/1:33,0:33:13.96:52,0,14	0/0:31,0:29:17.71:0,18,220	0/1:27,0:26:2.86:3,0,157	0/1:13,1:13:1.62:90,0,2	0/1:20,0:19:27.53:92,0,28	0/0:22,0:21:34.20:0,34,308	0/1:30,0:30:3.34:3,0,133	0/0:38,0:38:44.10:0,44,340	1/1:22,0:22:2.96:19,3,0	0/1:26,0:26:15.99:16,0,16	0/1:23,0:23:9.54:74,0,10	0/1:32,1:32:21.80:334,0,22	0/1:28,0:28:12.67:227,0,13	0/0:20,0:19:21.53:0,22,200	1/1:12,0:11:15.03:153,15,0
chr10	49621936	.	G	GT	2306.45	PASS	AB=0.584;AC=12;AF=0.214;AN=56;BaseQRankSum=-2.354;DP=546;FS=0.000;HRun=10;HaplotypeScore=72.1022;InbreedingCoeff=0.7082;MQ=79.04;MQ0=0;MQRankSum=1.286;QD=17.34;ReadPosRankSum=-2.294;VQSLOD=3.3761;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:9.10:0,9,170	1/1:1,7:8:18.05:192,18,0	0/0:20,0:16:14.76:0,15,91	0/0:14,0:13:0.55:0,1,40	0/0:22,0:22:62.93:0,63,517	0/0:31,0:32:49.37:0,49,591	0/0:22,0:22:45.15:0,45,358	1/1:5,15:20:45.06:447,45,0	0/0:23,0:23:53.82:0,54,431	0/0:25,1:26:33.88:0,34,479	0/0:23,0:23:57.78:0,58,464	0/0:14,0:14:38.95:0,39,320	0/0:20,0:20:56.16:0,56,450	0/0:17,0:17:47.90:0,48,388	0/1:7,13:21:13.41:251,0,13	0/0:12,0:12:27.31:0,27,130	0/0:18,0:18:41.95:0,42,345	0/0:8,0:9:13.96:0,14,96	1/1:8,18:26:54.01:528,54,0	0/1:7,21:29:14.05:459,0,14	1/1:0,13:13:30.08:320,30,0	0/0:24,0:24:41.13:0,41,443	0/0:20,0:21:49.95:0,50,396	0/0:13,0:15:36.98:0,37,276	0/0:29,0:29:77.88:0,78,640	0/0:24,0:24:50.81:0,51,408	1/1:5,11:16:27.07:288,27,0	0/0:1,0:1:2.98:0,3,22
chr10	49621976	.	C	CA	358.16	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.287;DP=517;FS=0.000;HRun=6;HaplotypeScore=76.9656;InbreedingCoeff=0.9076;MQ=84.12;MQ0=0;MQRankSum=-2.438;QD=27.55;ReadPosRankSum=0.681;VQSLOD=4.1143;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:63.11:0,63,633	0/0:6,0:6:12.03:0,12,122	0/0:15,0:16:41.02:0,41,378	0/0:17,0:16:28:0,28,258	0/0:17,0:17:45.10:0,45,458	0/0:32,0:32:78.16:0,78,793	0/0:17,0:17:51.12:0,51,520	0/0:22,0:21:63.11:0,63,633	0/0:20,0:20:51.11:0,51,520	0/0:23,0:23:66.14:0,66,669	0/0:22,0:22:60.13:0,60,610	0/0:16,0:16:39.08:0,39,398	0/0:15,0:15:30.07:0,30,306	0/0:21,0:21:60.12:0,60,604	0/0:18,0:18:45.09:0,45,459	1/1:1,12:13:36.12:453,36,0	0/0:7,0:7:18.04:0,18,184	0/0:12,0:12:24.05:0,24,244	0/0:25,0:25:66.15:0,66,673	0/0:23,0:23:57.11:0,57,578	0/0:14,0:14:27.06:0,27,274	0/0:25,0:25:66.11:0,66,673	0/0:23,0:23:60.11:0,60,603	0/0:20,0:20:51.11:0,51,520	0/0:22,0:22:54.12:0,54,551	0/0:24,0:24:66.15:0,66,673	0/0:19,0:19:45.10:0,45,459	0/0:3,0:3:9.02:0,9,92
chr10	49622025	.	TAC	T	3828.57	PASS	AB=0.785;AC=34;AF=0.654;AN=52;BaseQRankSum=2.471;DP=552;FS=0.690;HRun=0;HaplotypeScore=101.1208;InbreedingCoeff=0.0467;MQ=57.76;MQ0=12;MQRankSum=0.140;QD=8.66;ReadPosRankSum=1.817;VQSLOD=3.5086;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:14,14:30:32.75:322,33,0	0/0:6,0:7:9.02:0,9,113	./.	./.	1/1:14,9:25:26.56:231,27,0	0/1:14,14:30:41.19:334,0,41	0/1:14,4:21:9.64:247,0,10	0/0:16,0:19:2.51:0,3,9	1/1:15,8:24:23.73:223,24,0	0/1:19,0:19:6.63:7,0,231	0/1:14,0:15:16.16:16,0,78	0/1:11,7:21:15.32:221,0,15	1/1:5,9:18:26.40:221,26,0	0/1:16,1:17:5.86:6,0,329	0/0:13,0:17:0.86:0,1,238	1/1:9,0:19:25.57:125,26,0	0/1:7,6:12:21.16:188,0,21	1/1:9,8:17:7.75:241,8,0	0/1:15,0:18:0.16:27,0,0	1/1:8,0:18:8.52:42,9,0	0/0:14,0:15:0:0,0,0	0/1:10,10:20:10.82:258,0,11	1/1:10,12:23:29.91:311,30,0	1/1:8,9:18:23.90:245,24,0	1/1:9,11:21:23.90:245,24,0	1/1:17,4:22:17.87:179,18,0	0/1:14,0:23:52.16:73,0,52	1/1:5,1:5:6.02:66,6,0
chr10	49626384	.	G	GA	2661.82	PASS	AB=0.693;AC=22;AF=0.393;AN=56;BaseQRankSum=-7.813;DP=548;FS=9.868;HRun=8;HaplotypeScore=63.6056;InbreedingCoeff=0.3335;MQ=43.00;MQ0=41;MQRankSum=-0.432;QD=10.28;ReadPosRankSum=0.578;VQSLOD=1.1579;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:34:75.02:0,75,686	0/0:14,0:12:30.02:0,30,275	0/0:15,0:6:6.88:0,7,54	0/0:17,0:4:9:0,9,81	1/1:3,18:14:24.54:278,25,0	0/0:28,0:26:60.03:0,60,549	0/0:23,0:16:45.02:0,45,411	1/1:5,3:4:11.99:122,12,0	0/0:31,0:27:60.03:0,60,549	1/1:5,15:17:42.11:473,42,0	1/1:3,12:11:21.06:240,21,0	0/0:11,0:8:24.01:0,24,220	0/0:24,0:21:44.96:0,45,403	0/1:16,9:23:99:231,0,138	0/0:23,0:22:54.02:0,54,493	0/1:6,9:11:99:111,0,110	0/1:4,7:9:30.72:169,0,31	0/1:2,3:5:18.39:60,0,18	0/1:12,4:9:76.83:77,0,138	0/1:25,12:26:90.63:91,0,159	0/1:14,7:15:58.29:149,0,58	0/0:11,0:8:12:0,12,110	0/0:27,0:26:66.03:0,66,603	0/0:29,0:27:57.01:0,57,522	0/1:10,13:19:73.63:241,0,74	1/1:6,13:13:2.60:268,3,0	1/1:4,12:12:21.06:242,21,0	1/1:2,5:7:9.03:104,9,0
chr10	49627723	.	A	AAG	1219.67	PASS	AB=0.931;AC=39;AF=0.929;AN=42;BaseQRankSum=0.556;DP=375;FS=6.550;HRun=0;HaplotypeScore=78.9965;InbreedingCoeff=0.0109;MQ=46.84;MQ0=11;MQRankSum=0.320;QD=3.99;ReadPosRankSum=-0.421;VQSLOD=1.5817;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:28:24.01:239,24,0	1/1:11,0:11:0.47:1,0,0	./.	./.	./.	1/1:13,4:17:3.01:45,3,0	1/1:17,0:17:5.38:52,5,0	1/1:18,0:16:8.99:93,9,0	1/1:11,0:11:6:68,6,0	1/1:18,0:18:19.03:155,19,0	0/1:14,0:13:0:0,0,0	1/1:14,0:14:2.99:23,3,0	./.	1/1:7,0:7:3:26,3,0	./.	1/1:8,0:8:3.01:43,3,0	./.	./.	1/1:10,0:8:3.01:33,3,0	1/1:18,0:17:3.01:38,3,0	1/1:8,0:7:6.02:83,6,0	0/1:18,0:19:15.12:15,0,29	1/1:9,0:9:3.01:43,3,0	0/1:14,5:18:52.62:77,0,53	1/1:14,0:14:6.01:66,6,0	1/1:20,0:20:23.52:177,24,0	1/1:14,0:12:5.21:31,5,0	1/1:11,0:8:2.19:5,2,0
chr10	49628088	.	CAT	C	15666.27	PASS	AB=1.000;AC=53;AF=0.946;AN=56;BaseQRankSum=0.780;DP=615;FS=3.797;HRun=0;HaplotypeScore=126.9133;InbreedingCoeff=0.7262;MQ=70.45;MQ0=0;MQRankSum=-6.560;QD=25.98;ReadPosRankSum=3.722;VQSLOD=5.7956;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,28:33:78.25:1003,78,0	1/1:3,12:15:36.12:463,36,0	0/0:12,0:12:21.07:0,21,333	0/1:12,0:13:6.27:6,0,328	1/1:4,19:23:51.17:656,51,0	1/1:1,22:23:60.19:772,60,0	1/1:2,27:29:78.25:1004,78,0	1/1:5,0:27:53.80:252,54,0	1/1:2,24:26:66.21:849,66,0	1/1:3,20:23:60.18:758,60,0	1/1:6,18:24:36.12:463,36,0	1/1:1,21:22:60.20:772,60,0	1/1:0,15:15:36.12:463,36,0	1/1:1,24:25:60.20:772,60,0	1/1:0,24:24:60.20:772,60,0	1/1:1,19:20:54.18:695,54,0	1/1:3,18:21:54.18:695,54,0	1/1:3,10:13:27.09:347,27,0	1/1:4,0:22:44.06:220,44,0	1/1:1,0:33:76.70:377,77,0	1/1:2,0:24:48.29:238,48,0	1/1:5,23:28:51.03:656,51,0	1/1:1,15:16:45.15:579,45,0	1/1:2,18:20:51.17:656,51,0	1/1:1,22:23:57.19:734,57,0	1/1:2,23:25:66.20:835,66,0	1/1:2,0:27:65.34:321,65,0	1/1:1,8:9:24.08:309,24,0
chr10	49628183	.	T	TA	318.04	PASS	AB=0.891;AC=4;AF=0.071;AN=56;BaseQRankSum=-0.378;DP=582;FS=17.459;HRun=11;HaplotypeScore=89.4647;InbreedingCoeff=0.4046;MQ=76.19;MQ0=0;MQRankSum=-0.564;QD=6.00;ReadPosRankSum=-1.888;VQSLOD=0.1729;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:55:44.44:0,44,689	0/0:6,0:6:17.93:0,18,139	0/1:15,1:16:8.42:8,0,102	0/0:10,1:11:4.58:0,5,45	0/1:17,4:21:3.12:3,0,215	0/0:19,0:19:29.61:0,30,223	0/0:27,0:27:56.69:0,57,437	0/0:23,0:25:51.82:0,52,381	0/0:27,0:27:63.60:0,64,486	0/0:20,0:20:14.83:0,15,116	0/0:9,0:9:14.90:0,15,114	0/0:16,0:16:35.81:0,36,276	0/0:22,0:22:56.77:0,57,439	0/0:14,0:14:29.86:0,30,231	0/0:27,0:27:59.69:0,60,462	1/1:4,11:16:41.92:410,42,0	0/0:25,0:25:65.71:0,66,508	0/0:16,0:16:41.82:0,42,325	0/0:17,1:18:2.36:0,2,200	0/0:24,0:24:20.37:0,20,139	0/0:24,0:25:49.73:0,50,373	0/0:14,0:15:16.89:0,17,120	0/0:24,3:28:16.98:0,17,299	0/0:30,0:30:71.65:0,72,553	0/0:16,4:21:11.40:0,11,268	0/0:22,0:22:47.77:0,48,371	0/0:18,0:18:46.85:0,47,354	0/0:8,0:8:12.11:0,12,131
chr10	49629108	.	G	GT	622.22	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-6.358;DP=623;FS=0.000;HRun=6;HaplotypeScore=56.1581;InbreedingCoeff=0.9683;MQ=77.77;MQ0=0;MQRankSum=-0.051;QD=29.63;ReadPosRankSum=0.610;VQSLOD=4.0868;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:39:99:0,105,1071	0/0:14,0:14:36.08:0,36,367	0/0:15,0:15:39.08:0,39,392	0/0:12,0:12:21.32:0,21,247	0/0:40,0:40:99:0,108,1090	0/0:27,0:27:72.10:0,72,716	0/0:12,0:12:33.04:0,33,322	0/0:26,0:26:60.13:0,60,612	0/0:15,0:15:45.09:0,45,452	0/0:32,0:32:96.22:0,96,979	0/0:26,0:26:78.13:0,78,778	0/0:14,0:14:33.07:0,33,337	0/0:22,0:22:60.11:0,60,604	0/0:15,0:15:12.53:0,13,341	0/0:23,0:23:54.12:0,54,551	1/1:1,20:21:57.18:717,57,0	0/0:15,0:15:39.07:0,39,391	0/0:31,0:31:84.12:0,84,831	0/0:14,0:14:42.08:0,42,422	0/0:44,0:44:99:0,117,1187	0/0:15,0:15:38.99:0,39,376	0/0:21,0:21:57.13:0,57,581	0/0:28,0:28:66.12:0,66,664	0/0:16,0:16:45.10:0,45,459	0/0:18,0:18:51.12:0,51,520	0/0:33,0:33:99:0,99,1009	0/0:23,0:23:66.15:0,66,673	0/0:11,0:11:30.04:0,30,298
chr10	49630728	.	T	TG	667.13	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=-5.404;DP=586;FS=0.000;HRun=8;HaplotypeScore=59.4482;InbreedingCoeff=0.7202;MQ=71.61;MQ0=0;MQRankSum=0.347;QD=12.83;ReadPosRankSum=0.032;VQSLOD=2.8459;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:38:99:0,105,956	1/1:0,7:7:21.06:242,21,0	0/1:23,0:21:19.32:19,0,270	0/0:16,0:14:6.20:0,6,157	0/0:37,0:37:96.02:0,96,878	0/0:34,0:34:93.03:0,93,847	0/0:14,0:14:42:0,42,379	0/0:16,1:17:7.39:0,7,318	0/0:21,0:21:51.02:0,51,467	0/0:20,0:21:59.07:0,59,528	0/0:19,0:19:57.03:0,57,522	0/0:18,0:18:39:0,39,352	0/0:23,0:23:53.97:0,54,482	0/0:11,0:11:24.01:0,24,220	1/1:2,19:22:47.97:534,48,0	0/0:21,0:21:56.99:0,57,511	0/0:26,0:26:66.01:0,66,599	0/0:12,0:12:33.02:0,33,302	0/0:17,0:17:48.03:0,48,438	0/0:26,0:26:68.93:0,69,619	0/0:25,0:25:66.03:0,66,604	0/0:18,0:18:48.01:0,48,434	0/0:24,0:24:63.03:0,63,575	0/0:12,0:12:27.01:0,27,247	0/0:23,0:23:63.01:0,63,569	0/0:22,0:22:66.04:0,66,604	0/0:21,0:21:60.03:0,60,549	0/0:16,0:16:45.02:0,45,411
chr10	49633507	.	CT	C	1547.15	PASS	AB=0.938;AC=34;AF=0.607;AN=56;BaseQRankSum=-3.381;DP=331;FS=11.201;HRun=10;HaplotypeScore=49.0188;InbreedingCoeff=0.6690;MQ=72.86;MQ0=24;MQRankSum=2.288;QD=8.69;ReadPosRankSum=5.308;VQSLOD=0.5720;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:21:35.74:0,36,326	0/0:6,0:5:11.90:0,12,114	0/0:24,1:10:0.93:0,1,65	0/0:19,0:14:17.97:0,18,108	1/1:5,13:17:23.98:207,24,0	1/1:6,1:6:8.98:78,9,0	0/1:12,2:14:1.65:108,0,2	0/0:25,0:25:33.05:0,33,352	1/1:9,2:9:5.79:49,6,0	1/1:7,6:13:17.97:155,18,0	1/1:1,3:4:2.99:26,3,0	1/1:5,1:5:2.98:26,3,0	1/1:5,0:5:8.99:78,9,0	1/1:9,1:10:2.96:26,3,0	0/0:3,0:3:8.97:0,9,78	0/1:9,0:6:9.12:20,0,9	1/1:6,1:6:11.89:94,12,0	1/1:1,7:7:6:52,6,0	0/0:14,0:14:21.02:0,21,213	0/0:13,0:12:21.52:0,22,177	0/0:12,0:12:29.95:0,30,295	1/1:3,6:9:14.98:130,15,0	1/1:3,6:9:2.98:26,3,0	1/1:5,0:5:11.90:94,12,0	1/1:2,8:9:6:52,6,0	1/1:13,4:15:35.98:311,36,0	0/0:11,0:11:16.79:0,17,129	1/1:11,5:12:26.34:212,26,0
chr10	49633600	.	T	TCCCCCTC	787.55	PASS	AB=0.922;AC=5;AF=0.109;AN=46;BaseQRankSum=-1.774;DP=225;FS=0.000;HRun=0;HaplotypeScore=27.7743;InbreedingCoeff=0.0412;MQ=21.46;MQ0=114;MQRankSum=-0.395;QD=14.86;ReadPosRankSum=0.892;VQSLOD=1.4913;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,6:7:18.06:689,18,0	0/0:3,0:1:3.01:0,3,72	./.	./.	0/0:6,0:5:9.03:0,9,188	0/0:5,0:3:9.03:0,9,216	0/1:13,1:10:96.80:97,0,246	0/1:20,0:11:10.32:10,0,526	./.	0/0:6,0:3:6.02:0,6,144	0/0:6,0:3:6.02:0,6,144	0/0:6,0:2:3.01:0,3,72	0/0:5,0:1:3.01:0,3,72	./.	0/1:4,1:4:99:103,0,204	./.	0/0:10,0:6:6.02:0,6,130	0/0:6,0:3:5.98:0,6,92	0/0:10,0:5:12.04:0,12,275	0/0:8,0:5:12.04:0,12,261	0/0:16,0:3:3.01:0,3,72	0/0:6,0:3:6.02:0,6,144	0/0:7,0:2:6.02:0,6,130	0/0:11,0:1:3.01:0,3,58	0/0:7,0:3:3.01:0,3,58	0/0:11,0:6:15.05:0,15,347	0/0:14,0:6:9.03:0,9,216	0/0:12,0:7:6.02:0,6,144
chr10	49641271	.	T	TC	6630.52	PASS	AB=0.955;AC=53;AF=0.946;AN=56;BaseQRankSum=-2.068;DP=317;FS=34.428;HRun=1;HaplotypeScore=116.7331;InbreedingCoeff=0.4242;MQ=60.02;MQ0=4;MQRankSum=-3.947;QD=23.85;ReadPosRankSum=2.466;VQSLOD=2.9993;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,13:16:36.12:515,36,0	1/1:0,3:3:6.02:88,6,0	0/1:20,1:8:24.87:25,0,119	0/0:38,0:16:32.87:0,33,338	1/1:0,7:7:11.97:148,12,0	1/1:1,13:14:40.35:365,40,0	1/1:4,13:15:29.67:314,30,0	1/1:2,9:21:36.53:531,37,0	1/1:0,12:11:27.09:220,27,0	1/1:0,8:12:21.06:294,21,0	1/1:1,3:4:9.03:126,9,0	1/1:0,5:5:14.77:116,15,0	1/1:1,4:5:14.98:177,15,0	1/1:1,9:10:18.06:263,18,0	1/1:1,13:13:38.16:524,38,0	1/1:0,14:12:33.07:447,33,0	1/1:0,6:6:12.04:173,12,0	1/1:0,3:3:9.03:131,9,0	1/1:8,7:14:34.40:382,34,0	1/1:0,5:5:3.01:43,3,0	1/1:0,13:12:21.07:281,21,0	1/1:0,6:6:14.77:139,15,0	1/1:0,6:5:14.64:110,15,0	1/1:2,9:11:19.15:256,19,0	1/1:0,5:5:8.96:107,9,0	1/1:1,8:10:26.87:370,27,0	1/1:1,12:10:23.73:349,24,0	1/1:3,0:3:9.03:135,9,0
chr10	49641274	.	TC	T	3592.21	PASS	AB=1.000;AC=50;AF=0.893;AN=56;BaseQRankSum=2.289;DP=304;FS=51.847;HRun=1;HaplotypeScore=121.7413;InbreedingCoeff=0.4007;MQ=60.27;MQ0=4;MQRankSum=-4.601;QD=14.78;ReadPosRankSum=5.130;VQSLOD=0.5931;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:16:18.34:359,18,0	1/1:2,0:2:5.05:42,5,0	0/0:19,1:8:20.93:0,21,227	0/0:40,1:16:32.25:0,32,363	1/1:5,0:5:8.51:75,9,0	1/1:14,0:14:20.71:178,21,0	1/1:16,0:14:15.14:89,15,0	1/1:23,0:20:2.42:174,2,0	1/1:12,0:11:24.82:134,25,0	0/1:13,0:12:12.63:102,0,13	1/1:4,0:4:9.03:115,9,0	1/1:5,0:5:7.75:41,8,0	1/1:5,0:5:8.37:69,8,0	1/1:9,0:9:17.98:180,18,0	1/1:14,0:13:35.70:414,36,0	1/1:14,0:12:27.07:260,27,0	1/1:6,0:6:8.51:112,9,0	1/1:3,0:3:9.03:103,9,0	0/1:13,0:12:37.62:38,0,109	1/1:3,0:3:3.01:36,3,0	1/1:9,0:8:18.89:197,19,0	1/1:6,0:6:15.41:63,15,0	1/1:6,0:5:12.63:48,13,0	1/1:11,0:11:17.99:200,18,0	1/1:5,0:5:5.94:45,6,0	1/1:12,0:10:13.14:185,13,0	1/1:13,0:10:25.25:261,25,0	1/1:0,3:3:8.96:69,9,0
chr10	49641278	.	CCT	C	6008.85	PASS	AB=0.667;AC=49;AF=0.907;AN=54;BaseQRankSum=-0.909;DP=270;FS=58.065;HRun=0;HaplotypeScore=114.9845;InbreedingCoeff=0.5166;MQ=62.37;MQ0=4;MQRankSum=-4.804;QD=28.48;ReadPosRankSum=2.527;VQSLOD=3.2824;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,12:13:39.08:565,39,0	1/1:0,1:1:3.01:44,3,0	0/0:18,0:7:11.71:0,12,91	0/0:36,3:16:5.75:0,6,303	1/1:0,2:3:6.01:76,6,0	1/1:0,12:12:36.10:441,36,0	1/1:2,13:13:24.04:264,24,0	1/1:14,7:18:33.10:481,33,0	1/1:2,9:10:24.54:278,25,0	1/1:6,6:11:18.01:242,18,0	1/1:0,3:3:9.03:137,9,0	1/1:0,4:4:12.03:137,12,0	1/1:0,4:4:12.04:156,12,0	1/1:0,6:9:18.05:231,18,0	1/1:0,14:13:36.07:523,36,0	1/1:4,10:12:32.99:419,33,0	1/1:1,5:6:12.04:177,12,0	1/1:0,3:3:9.03:142,9,0	0/1:2,3:5:3.50:158,0,3	1/1:0,2:2:3.01:46,3,0	1/1:2,6:8:23.63:272,24,0	1/1:0,5:5:14.99:167,15,0	1/1:0,5:4:12.03:135,12,0	1/1:0,9:9:15.94:217,16,0	1/1:0,2:4:6.01:59,6,0	1/1:3,4:10:24.04:296,24,0	1/1:3,10:10:23.90:344,24,0	./.
chr10	49641284	.	TCCGTCA	T	2214.65	PASS	AB=0.960;AC=35;AF=0.648;AN=54;BaseQRankSum=-1.427;DP=246;FS=7.112;HRun=0;HaplotypeScore=134.4384;InbreedingCoeff=0.0617;MQ=59.95;MQ0=4;MQRankSum=-2.778;QD=10.55;ReadPosRankSum=-0.855;VQSLOD=2.0269;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:14:5.73:108,6,0	1/1:1,0:1:2.94:18,3,0	1/1:9,0:3:3:25,3,0	0/1:36,0:16:78.34:78,0,132	0/0:3,0:3:3.48:0,3,31	1/1:4,7:11:24.92:374,25,0	1/1:8,3:10:7.52:156,8,0	0/1:18,0:15:2.45:214,0,2	1/1:4,7:10:21.07:298,21,0	0/1:11,0:10:35.52:36,0,55	0/1:3,0:3:9.21:44,0,9	1/1:0,4:4:12.04:167,12,0	1/1:2,2:4:3.20:81,3,0	0/1:9,0:9:34.37:50,0,34	0/0:14,0:13:8.45:0,8,218	1/1:11,0:10:17.69:130,18,0	0/1:6,0:7:20.66:31,0,21	0/1:3,0:3:9.83:70,0,10	0/0:6,0:6:2.82:0,3,31	1/1:2,0:2:2.50:9,2,0	0/1:9,0:10:4.22:41,0,4	1/1:2,3:5:5.75:122,6,0	1/1:1,4:4:12.04:155,12,0	1/1:10,1:11:14.91:142,15,0	0/0:3,0:3:5.60:0,6,26	0/1:9,0:8:23.44:23,0,86	0/0:10,0:8:2.61:0,3,45	./.
chr10	49641293	.	TCTTCC	T	214.26	PASS	AB=0.981;AC=11;AF=0.196;AN=56;BaseQRankSum=5.808;DP=251;FS=5.775;HRun=0;HaplotypeScore=130.9793;InbreedingCoeff=-0.0532;MQ=47.49;MQ0=1;MQRankSum=-1.109;QD=2.04;ReadPosRankSum=0.080;VQSLOD=1.6127;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:13,1:13:18.78:0,19,411	1/1:0,1:1:3.01:57,3,0	0/1:7,0:1:0:0,0,0	0/1:34,0:13:17.26:17,0,207	0/0:6,0:6:3.88:0,4,35	0/0:11,0:11:33.11:0,33,634	0/0:13,0:11:18.06:0,18,306	0/0:17,0:14:36.12:0,36,826	0/0:13,0:12:30.10:0,30,545	0/0:12,0:11:25.57:0,26,575	0/0:5,0:5:11.78:0,12,246	0/0:5,0:5:13.28:0,13,181	0/0:5,0:5:15.05:0,15,274	0/0:7,0:7:7.36:0,7,90	0/1:13,1:13:74.96:75,0,672	0/1:8,1:9:95.12:95,0,192	0/1:5,0:6:11.34:11,0,108	0/0:3,0:3:6.02:0,6,119	0/0:8,0:8:10.31:0,10,497	0/1:2,0:3:13.73:14,0,21	0/1:8,0:9:38.80:39,0,235	0/0:5,0:5:12.04:0,12,212	0/0:8,0:8:1.13:0,1,265	0/0:10,0:10:14.73:0,15,266	0/0:3,0:3:1.77:0,2,4	0/1:11,0:9:5.70:6,0,159	0/1:9,0:8:33.18:33,0,240	0/0:1,0:1:3.01:0,3,70
chr10	49642892	.	TTC	T	585.51	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=4.752;DP=500;FS=43.577;HRun=0;HaplotypeScore=69.6538;InbreedingCoeff=0.4263;MQ=43.89;MQ0=39;MQRankSum=-1.303;QD=5.80;ReadPosRankSum=-0.383;VQSLOD=0.9932;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,16:21:17.93:335,18,0	0/0:8,0:5:14.64:0,15,197	0/0:9,0:2:3:0,3,27	0/0:10,0:5:5.52:0,6,47	0/0:30,0:30:37.98:0,38,777	0/0:16,0:15:37.96:0,38,505	0/1:18,0:13:2.85:3,0,260	0/0:20,0:19:32.69:0,33,600	0/0:12,0:12:32.87:0,33,349	0/0:20,0:18:39.51:0,40,513	0/0:13,0:12:9.95:0,10,209	0/1:13,0:12:10.13:10,0,257	0/0:14,0:13:13.41:0,13,324	0/0:15,0:14:15.51:0,16,231	0/0:8,0:6:15.04:0,15,252	1/1:4,10:11:23.85:355,24,0	0/0:30,0:27:16.78:0,17,683	0/0:35,0:32:25.44:0,25,893	0/1:32,0:29:15.86:16,0,850	0/0:30,0:29:29.84:0,30,844	0/0:17,0:14:24.04:0,24,366	0/0:16,0:14:4.06:0,4,433	0/0:11,0:10:26.92:0,27,395	0/0:24,0:18:8.42:0,8,371	0/0:11,0:8:23.95:0,24,270	0/0:16,0:14:33.91:0,34,480	0/0:22,0:19:44.59:0,45,577	0/0:12,0:10:10.95:0,11,286
chr10	49643586	.	C	CACAACA	9276.88	PASS	AB=0.798;AC=26;AF=0.464;AN=56;BaseQRankSum=-1.939;DP=559;FS=39.543;HRun=0;HaplotypeScore=125.0173;InbreedingCoeff=0.7892;MQ=67.43;MQ0=1;MQRankSum=-5.904;QD=32.21;ReadPosRankSum=-4.044;VQSLOD=2.0470;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:24:7.25:0,7,236	0/0:2,0:6:9.03:0,9,126	0/0:39,0:32:9.02:0,9,130	0/0:27,0:18:6.02:0,6,98	1/1:8,13:25:54.05:1317,54,0	0/0:16,0:15:36.11:0,36,654	0/0:14,0:14:15.05:0,15,305	0/1:20,0:23:34.35:162,0,34	0/0:14,0:15:33.09:0,33,522	1/1:18,9:31:51.12:1215,51,0	1/1:13,15:35:69.04:1570,69,0	0/0:10,0:10:12.04:0,12,244	0/0:20,0:20:36.11:0,36,654	1/1:11,11:22:27.09:871,27,0	0/0:10,0:24:30.10:0,30,419	0/0:19,0:19:30.10:0,30,588	1/1:10,4:16:13.29:370,13,0	1/1:6,2:11:6.02:279,6,0	1/1:9,0:16:17.66:122,18,0	0/1:11,0:17:36.24:105,0,36	1/1:5,0:17:29.42:183,29,0	0/0:24,0:24:44.69:0,45,868	0/0:16,0:17:33.11:0,33,611	0/0:16,0:16:33.09:0,33,601	1/1:5,11:17:33.11:1055,33,0	1/1:10,8:18:27.09:872,27,0	1/1:15,0:25:29.47:195,29,0	1/1:6,7:14:33.05:958,33,0
chr10	49644096	.	CTG	C	1363.17	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.576;DP=675;FS=19.116;HRun=0;HaplotypeScore=79.3248;InbreedingCoeff=0.9453;MQ=90.71;MQ0=0;MQRankSum=-3.703;QD=36.84;ReadPosRankSum=2.184;VQSLOD=4.1655;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,36:37:99:1458,99,0	0/0:3,0:3:9.03:0,9,159	0/0:26,0:26:72.24:0,72,1298	0/0:27,0:27:72.25:0,72,1332	0/0:19,0:19:54.19:0,54,1010	0/0:21,0:21:57.20:0,57,1067	0/0:24,0:23:72.25:0,72,1323	0/0:31,0:31:84.29:0,84,1563	0/0:20,0:20:60.21:0,60,1114	0/0:26,0:26:78.27:0,78,1459	0/0:20,0:20:57.17:0,57,1005	0/0:31,0:31:87.30:0,87,1627	0/0:19,0:19:57.20:0,57,1036	0/0:26,0:26:72.25:0,72,1341	0/0:32,0:32:96.33:0,96,1797	0/0:21,0:21:63.20:0,63,1148	0/0:21,0:21:60.21:0,60,1124	0/0:17,0:17:51.17:0,51,955	0/0:20,0:20:60.21:0,60,1112	0/0:30,0:30:90.29:0,90,1645	0/0:33,0:33:96.33:0,96,1797	0/0:26,0:26:78.27:0,78,1444	0/0:19,0:19:57.20:0,57,1067	0/0:21,0:21:63.22:0,63,1170	0/0:22,0:22:63.22:0,63,1179	0/0:23,0:23:69.24:0,69,1290	0/0:43,0:42:99:0,126,2357	0/0:17,0:17:51.17:0,51,954
chr10	49645733	.	CTCTAATT	C	6307.61	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=13.834;DP=665;FS=12.000;HRun=0;HaplotypeScore=152.3406;InbreedingCoeff=0.9918;MQ=88.41;MQ0=0;MQRankSum=-11.133;QD=60.07;ReadPosRankSum=-1.422;VQSLOD=4.2160;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:90.28:0,90,3421	0/0:4,0:4:12.04:0,12,484	0/0:23,0:22:60.17:0,60,2052	0/0:32,0:32:90.27:0,90,3205	0/0:29,0:29:81.26:0,81,3037	0/0:28,0:28:84.29:0,84,3231	0/0:33,0:33:99:0,99,3883	1/1:4,22:26:66.20:1542,66,0	0/0:29,0:29:87.30:0,87,3419	0/0:30,0:30:90.31:0,90,3603	0/0:22,0:22:66.23:0,66,2616	0/0:15,0:15:45.14:0,45,1718	0/0:23,0:23:69.22:0,69,2428	0/0:23,0:23:69.22:0,69,2643	0/0:21,0:21:63.22:0,63,2447	0/0:35,0:35:99:0,105,4192	0/0:28,0:28:75.26:0,75,3015	0/0:7,0:7:21.07:0,21,848	1/1:2,19:21:57.17:1378,57,0	1/1:0,13:13:33.11:869,33,0	1/1:2,14:16:30.09:622,30,0	0/0:26,0:26:78.27:0,78,3056	0/0:24,0:24:72.22:0,72,2607	0/0:17,0:17:51.18:0,51,1987	0/0:22,0:22:66.23:0,66,2636	0/0:35,0:34:99:0,102,3833	1/1:2,27:29:72.25:1896,72,0	0/0:21,0:21:60.21:0,60,2359
chr10	49646286	.	C	CCT	1311.40	PASS	AB=0.974;AC=17;AF=0.304;AN=56;BaseQRankSum=6.804;DP=385;FS=75.841;HRun=0;HaplotypeScore=160.2638;InbreedingCoeff=-0.3491;MQ=29.91;MQ0=8;MQRankSum=-2.688;QD=6.07;ReadPosRankSum=-0.565;VQSLOD=0.3075;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:16.53:0,17,471	0/1:8,0:8:24.45:24,0,69	0/0:24,0:2:6.02:0,6,84	0/0:24,0:1:2.74:0,3,12	0/0:11,0:11:5.27:0,5,80	0/1:18,1:18:99:121,0,239	0/1:16,0:15:13.60:14,0,271	0/0:12,0:10:11.74:0,12,116	0/1:12,0:12:34.68:251,0,35	0/1:21,0:20:16.13:16,0,426	0/1:14,0:14:29.52:30,0,69	0/1:14,1:15:99:153,0,156	0/1:11,0:11:43.28:79,0,43	0/1:14,0:13:46.49:46,0,215	0/1:9,3:12:99:211,0,114	0/0:12,0:12:13.48:0,13,108	0/0:12,0:12:25.33:0,25,330	0/0:4,0:4:9.03:0,9,125	0/0:8,0:7:18.27:0,18,222	0/1:19,0:19:98.49:111,0,98	0/0:7,0:5:8.06:0,8,82	0/1:12,0:12:94.07:114,0,94	0/1:11,0:10:5.83:6,0,101	0/0:18,1:18:10.46:0,10,114	0/0:15,0:15:10.33:0,10,367	0/1:19,0:18:74.94:75,0,285	0/1:11,1:12:63.14:162,0,63	1/1:0,1:1:3.01:53,3,0
chr10	49646287	.	CT	C	1001.76	PASS	AB=0.827;AC=18;AF=0.321;AN=56;BaseQRankSum=10.011;DP=391;FS=113.036;HRun=1;HaplotypeScore=142.9409;InbreedingCoeff=-0.4160;MQ=30.06;MQ0=8;MQRankSum=-1.327;QD=4.17;ReadPosRankSum=1.691;VQSLOD=-0.1007;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:19,2:21:15.10:15,0,592	0/0:5,3:8:10.56:0,11,117	0/0:25,0:2:6.02:0,6,96	0/0:26,0:1:2.80:0,3,13	0/0:10,1:11:11.16:0,11,117	0/1:17,2:18:20.16:20,0,265	0/1:15,2:16:52.92:53,0,307	0/1:9,3:10:54.73:55,0,158	0/1:10,2:12:42.04:42,0,80	0/1:16,5:20:94.65:95,0,480	0/0:12,3:15:6.73:0,7,131	0/1:11,4:15:70.48:70,0,182	0/1:7,4:11:4.11:127,0,4	0/1:12,2:13:53.54:54,0,249	0/1:9,3:12:53.48:53,0,137	0/1:7,5:12:19.16:238,0,19	0/0:11,1:12:0.45:0,0,343	0/0:5,0:5:11.98:0,12,163	0/0:8,0:7:7.22:0,7,228	0/1:15,4:19:55.69:56,0,209	0/0:7,0:5:8.70:0,9,96	0/1:8,4:12:61.18:61,0,158	0/1:10,1:10:17.96:18,0,134	0/0:18,1:18:4.84:0,5,126	0/0:15,0:15:35.27:0,35,474	0/1:16,3:18:78.56:79,0,312	0/1:9,3:12:74.72:113,0,75	1/1:1,0:1:0.47:1,0,0
chr10	49646289	.	CT	C	989.78	PASS	AB=0.958;AC=21;AF=0.375;AN=56;BaseQRankSum=10.440;DP=429;FS=207.576;HRun=2;HaplotypeScore=160.7632;InbreedingCoeff=-0.5366;MQ=30.40;MQ0=8;MQRankSum=-2.756;QD=3.32;ReadPosRankSum=2.209;VQSLOD=-0.4157;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,2:25:9.32:0,9,407	0/0:6,2:8:4.63:0,5,93	0/0:28,0:2:6.02:0,6,90	0/0:26,0:1:2.98:0,3,22	0/0:11,0:11:5.74:0,6,86	0/1:19,0:18:99:137,0,284	0/1:18,0:17:30.04:30,0,336	0/1:12,0:10:23.99:24,0,117	0/1:9,3:12:62.07:146,0,62	0/1:25,0:24:44.13:44,0,444	0/1:17,0:17:21.90:22,0,173	0/1:14,1:15:90.29:90,0,187	0/1:10,2:12:23.01:56,0,23	0/1:14,1:13:49.33:49,0,250	0/1:12,2:14:99:112,0,170	0/1:13,0:13:44.68:55,0,45	0/1:12,0:13:5.19:5,0,327	0/1:7,0:7:2.76:3,0,179	0/0:8,0:7:7.22:0,7,212	0/1:19,0:19:30.89:31,0,107	0/0:7,0:5:8.62:0,9,98	0/1:14,0:14:28.35:28,0,189	0/1:12,0:11:10.98:11,0,124	0/1:20,1:20:11.27:11,0,215	0/0:18,0:18:0.25:0,0,390	0/1:23,1:22:99:131,0,268	0/1:14,0:14:60.38:121,0,60	1/1:1,0:1:3.01:33,3,0
chr10	49646296	.	CT	C	1521.39	PASS	AB=0.877;AC=20;AF=0.357;AN=56;BaseQRankSum=12.142;DP=503;FS=267.123;HRun=1;HaplotypeScore=199.1615;InbreedingCoeff=-0.5780;MQ=31.39;MQ0=18;MQRankSum=-4.905;QD=3.94;ReadPosRankSum=4.481;VQSLOD=-0.7445;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:26,2:26:78.43:78,0,490	0/0:6,2:9:4.05:0,4,97	0/0:28,0:2:6.02:0,6,96	0/0:26,0:1:3.01:0,3,48	0/1:14,1:13:2.43:2,0,85	0/1:24,2:24:75.24:75,0,335	0/1:20,3:20:74.46:74,0,349	0/1:10,2:9:83.56:102,0,84	0/1:16,1:17:23.86:24,0,200	0/1:29,5:33:99:140,0,563	0/1:16,3:18:9:9,0,184	0/1:12,4:16:71.84:72,0,176	0/1:10,4:14:67.14:171,0,67	0/1:15,2:14:40:40,0,271	0/1:12,3:14:74.86:75,0,165	0/1:8,7:15:49.97:238,0,50	0/1:12,1:13:16.79:17,0,362	0/0:7,0:7:21.07:0,21,315	0/0:10,0:8:7.63:0,8,225	0/1:17,4:20:27.99:135,0,28	0/0:9,0:5:6.02:0,6,66	0/1:16,4:20:99:104,0,162	0/1:17,1:16:22.50:22,0,142	0/0:24,0:23:20.74:0,21,345	0/1:21,0:21:4.34:4,0,404	0/1:24,3:25:99:122,0,361	0/1:13,2:15:69.45:166,0,69	0/0:4,0:3:8.96:0,9,74
chr10	49646300	.	T	TTC	1315.76	PASS	AB=0.961;AC=22;AF=0.393;AN=56;BaseQRankSum=11.329;DP=537;FS=78.748;HRun=0;HaplotypeScore=230.6313;InbreedingCoeff=-0.5540;MQ=30.88;MQ0=35;MQRankSum=-4.377;QD=3.16;ReadPosRankSum=2.003;VQSLOD=-0.4117;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:26,1:26:39.31:39,0,141	0/1:10,0:9:16.97:17,0,84	0/0:28,0:2:6.02:0,6,96	0/0:26,0:1:2.88:0,3,15	0/1:16,0:14:61.93:87,0,62	0/1:28,0:23:40.09:40,0,256	0/1:26,0:22:48.43:48,0,325	0/1:14,0:10:74.20:74,0,83	0/1:19,1:18:19.11:19,0,196	0/1:33,0:32:85.06:85,0,450	0/1:19,0:18:27.75:28,0,147	0/1:14,2:16:55.85:56,0,205	0/1:11,3:14:62.03:96,0,62	0/1:17,0:14:21.10:21,0,168	0/1:14,1:14:41.23:41,0,150	0/1:15,2:16:6.38:157,0,6	0/0:15,0:14:11.09:0,11,333	0/0:13,0:10:21.07:0,21,289	0/1:13,0:10:16.42:16,0,254	1/1:18,0:20:11.06:161,11,0	0/0:14,0:7:2.90:0,3,18	0/1:20,0:20:99:177,0,168	0/1:18,1:17:98.38:98,0,116	0/1:24,0:22:5.51:6,0,323	0/0:21,0:21:1.43:0,1,277	0/1:25,1:25:59.81:60,0,366	0/1:15,1:15:66.91:142,0,67	0/0:4,0:3:5.52:0,6,64
chr10	49646301	.	C	CT	1723.78	PASS	AB=0.955;AC=25;AF=0.446;AN=56;BaseQRankSum=13.178;DP=536;FS=184.979;HRun=1;HaplotypeScore=206.0845;InbreedingCoeff=-0.5833;MQ=30.93;MQ0=36;MQRankSum=-5.140;QD=3.82;ReadPosRankSum=3.814;VQSLOD=0.1476;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:23,4:25:84.60:85,0,114	0/1:11,0:10:0.80:1,0,74	0/0:28,0:2:6.02:0,6,84	0/0:26,0:1:3.01:0,3,30	0/1:15,1:14:17.96:18,0,69	0/1:29,0:23:95.98:96,0,239	0/1:25,1:22:92.03:92,0,308	0/1:15,0:10:18.88:19,0,102	0/1:17,2:17:99:127,0,178	0/1:33,0:32:99:169,0,351	0/1:18,1:18:61.81:62,0,110	0/1:16,0:16:34.92:35,0,189	0/1:13,0:12:55.77:101,0,56	0/1:16,0:13:34.89:35,0,171	0/1:15,0:13:33.56:34,0,189	1/1:13,4:16:2.87:164,3,0	0/1:13,2:14:7.74:8,0,268	0/0:13,0:10:18.02:0,18,211	0/1:12,1:10:28.01:28,0,242	1/1:21,0:20:5.65:150,6,0	0/0:12,1:6:2.85:0,3,16	0/1:19,1:20:80.28:80,0,154	0/1:20,1:19:52.05:52,0,76	0/1:23,1:22:13.81:14,0,325	0/1:19,1:21:95.28:95,0,311	0/1:28,1:26:99:243,0,264	0/1:12,3:14:24.41:169,0,24	0/0:5,0:4:8.94:0,9,80
chr10	49646302	.	C	CT	675.20	PASS	AB=0.978;AC=22;AF=0.393;AN=56;BaseQRankSum=9.658;DP=545;FS=32.978;HRun=0;HaplotypeScore=216.2816;InbreedingCoeff=-0.3069;MQ=30.94;MQ0=38;MQRankSum=-2.282;QD=1.79;ReadPosRankSum=1.461;VQSLOD=1.6134;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:15,9:26:35.67:271,36,0	0/0:11,0:10:4.34:0,4,82	0/0:28,0:2:6.02:0,6,84	0/0:26,0:1:3.01:0,3,32	0/0:16,0:14:8.90:0,9,86	0/1:28,0:22:9.28:9,0,216	0/1:26,1:23:29.39:29,0,306	0/1:16,0:11:15.66:16,0,84	0/0:19,0:17:1.99:0,2,178	0/1:33,1:33:24.61:25,0,293	0/1:18,1:18:6.88:7,0,82	0/1:15,1:16:19.80:20,0,170	0/1:11,2:12:45.03:45,0,79	0/1:16,0:13:20.16:20,0,141	0/1:15,0:13:3.65:4,0,186	1/1:16,1:16:5.35:126,5,0	0/0:15,0:14:16:0,16,241	0/1:14,0:10:28.16:28,0,45	0/0:14,0:11:13.62:0,14,236	1/1:21,0:20:0.51:69,1,0	0/0:14,0:6:1.49:0,1,16	0/1:19,1:20:48.91:49,0,157	0/1:21,0:19:13.08:13,0,63	0/0:25,0:23:20.40:0,20,290	0/1:21,0:21:22.95:23,0,210	0/1:29,0:26:8.24:8,0,263	0/1:15,0:14:44.87:56,0,45	0/1:7,0:6:10.51:13,0,11
chr10	49646303	.	CCT	C	1870.86	PASS	AB=0.967;AC=31;AF=0.596;AN=52;BaseQRankSum=1.631;DP=545;FS=12.127;HRun=0;HaplotypeScore=202.8426;InbreedingCoeff=0.0830;MQ=30.92;MQ0=39;MQRankSum=-2.754;QD=4.62;ReadPosRankSum=0.469;VQSLOD=1.9695;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:26:1.83:3,2,0	0/0:11,0:10:2.57:0,3,74	./.	./.	1/1:11,4:14:2.84:34,3,0	0/1:24,1:22:41.74:42,0,123	0/1:27,0:23:13.77:14,0,205	0/0:17,0:11:3.47:0,3,28	0/1:14,0:17:32.36:32,0,190	1/1:24,6:33:51.59:411,52,0	1/1:14,3:18:13.09:116,13,0	0/1:16,0:16:2.26:2,0,65	0/0:13,0:12:3.52:0,4,35	1/1:9,5:13:12.02:124,12,0	0/1:14,1:13:7.64:8,0,184	0/0:15,0:16:5.13:0,5,15	1/1:10,6:15:23.98:245,24,0	1/1:4,10:10:18.05:205,18,0	0/0:14,0:11:5.90:0,6,37	1/1:18,0:19:2.14:23,2,0	0/0:14,0:6:0:0,0,0	0/1:18,0:19:42.38:42,0,158	0/1:17,2:19:44.71:73,0,45	0/1:21,2:23:81.59:82,0,141	1/1:12,6:21:9.87:139,10,0	1/1:23,3:26:28.58:275,29,0	0/1:13,0:14:19.79:28,0,20	1/1:5,2:6:14.65:126,15,0
chr10	49646304	.	CT	C	2681.65	PASS	AB=0.959;AC=29;AF=0.518;AN=56;BaseQRankSum=11.035;DP=544;FS=121.442;HRun=1;HaplotypeScore=192.4477;InbreedingCoeff=-0.2965;MQ=31.00;MQ0=40;MQRankSum=-2.915;QD=6.11;ReadPosRankSum=1.456;VQSLOD=0.4688;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:26:21.48:196,21,0	0/0:11,0:10:5.63:0,6,95	0/0:28,0:2:6.02:0,6,68	0/0:27,0:1:3.01:0,3,34	0/1:16,0:14:16.80:17,0,25	0/1:28,0:22:99:139,0,169	0/1:27,0:23:99:132,0,259	0/1:15,0:9:53.79:54,0,84	0/1:18,0:16:99:108,0,179	0/1:28,5:32:39.19:328,0,39	1/1:18,1:18:3.06:57,3,0	0/1:14,0:14:92.27:92,0,131	0/1:13,2:14:52.87:180,0,53	0/1:15,0:12:21.74:98,0,22	0/1:15,1:14:71.21:71,0,189	1/1:16,0:15:28.38:286,28,0	0/1:16,0:15:21.82:55,0,22	1/1:14,0:10:0.89:3,1,0	0/0:14,0:10:26.77:0,27,259	1/1:17,3:19:18.44:143,18,0	0/1:14,0:6:0:0,0,0	0/1:21,0:21:99:163,0,148	0/1:20,2:20:42.65:77,0,43	0/0:25,0:23:4.41:0,4,234	0/1:20,1:21:84.29:84,0,135	0/1:26,3:26:95.02:299,0,95	0/1:12,3:14:28.01:202,0,28	1/1:7,0:6:8.95:57,9,0
chr10	49646958	.	CTA	C	89.89	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.188;DP=476;FS=10.194;HRun=0;HaplotypeScore=71.6262;InbreedingCoeff=0.7632;MQ=80.78;MQ0=10;MQRankSum=-2.126;QD=6.91;ReadPosRankSum=-1.414;VQSLOD=1.3998;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:32:74.62:0,75,700	0/0:4,0:4:7.53:0,8,51	0/0:30,0:26:63.18:0,63,650	0/0:42,0:32:87.72:0,88,825	0/0:11,0:11:29.81:0,30,235	0/0:23,0:22:51.66:0,52,446	0/0:18,0:18:38.88:0,39,334	0/0:24,0:24:57.79:0,58,533	0/0:15,0:15:24.75:0,25,270	0/0:22,0:21:56.36:0,56,580	0/0:7,0:7:14.96:0,15,120	0/0:17,0:17:29.95:0,30,295	0/0:16,0:15:36.41:0,36,264	0/0:16,0:16:41.96:0,42,404	0/0:20,0:20:30.45:0,30,219	1/1:0,13:13:12.04:176,12,0	0/0:14,0:13:38.71:0,39,313	0/0:16,0:16:29.85:0,30,259	0/0:8,0:8:17.28:0,17,154	0/0:8,0:8:12.07:0,12,111	0/0:27,0:26:47.88:0,48,406	0/0:14,0:14:28.30:0,28,245	0/0:12,0:12:25.74:0,26,203	0/0:24,0:23:38.16:0,38,303	0/0:6,0:6:16.75:0,17,123	0/0:22,0:21:49.79:0,50,541	0/0:11,0:11:32.83:0,33,276	0/0:2,0:2:5.99:0,6,49
chr10	49646961	.	T	TACAC	2092.02	PASS	AB=0.946;AC=37;AF=0.712;AN=52;BaseQRankSum=-2.611;DP=546;FS=14.167;HRun=0;HaplotypeScore=107.3832;InbreedingCoeff=0.3589;MQ=74.85;MQ0=12;MQRankSum=1.907;QD=5.35;ReadPosRankSum=-1.270;VQSLOD=0.9870;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:36,0:35:59.10:59,0,70	0/0:1,0:3:3:0,3,28	./.	./.	1/1:14,0:14:14.38:136,14,0	1/1:30,0:29:22.32:308,22,0	0/1:17,6:24:0:0,0,0	0/0:24,0:24:5.19:0,5,19	0/0:24,0:24:7.84:0,8,46	1/1:26,0:25:12.88:124,13,0	1/1:7,0:7:3:25,3,0	1/1:12,8:23:6.02:107,6,0	1/1:17,0:16:5.97:124,6,0	1/1:18,4:25:0.39:132,0,0	0/0:10,0:20:9.01:0,9,84	0/0:14,0:14:11.90:0,12,117	1/1:13,1:13:15.01:212,15,0	0/1:15,0:15:30.88:76,0,31	1/1:10,0:10:2.90:16,3,0	0/1:6,0:10:0:0,0,0	1/1:25,0:24:2.12:23,2,0	1/1:20,0:20:9.01:143,9,0	1/1:15,0:15:9.03:183,9,0	1/1:26,0:25:3.89:53,4,0	1/1:9,0:9:12:140,12,0	1/1:24,0:23:24.40:317,24,0	0/1:12,0:12:12.66:41,0,13	1/1:6,0:5:6.01:24,6,0
chr10	49650504	.	GA	G	599.92	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=6.443;DP=513;FS=12.744;HRun=9;HaplotypeScore=93.5158;InbreedingCoeff=0.7669;MQ=81.20;MQ0=1;MQRankSum=-4.708;QD=8.45;ReadPosRankSum=0.398;VQSLOD=0.8029;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,21:27:46.05:436,46,0	0/0:5,0:5:15.04:0,15,173	0/1:28,0:22:7.83:8,0,161	0/0:15,0:12:14.27:0,14,152	0/0:17,0:17:35.67:0,36,391	0/0:16,0:16:27.02:0,27,312	0/0:14,0:14:36.11:0,36,415	0/0:30,0:30:66.17:0,66,743	0/0:15,0:15:24.07:0,24,277	0/0:21,0:21:54.11:0,54,584	0/0:14,0:14:23.96:0,24,245	0/0:17,0:17:42.03:0,42,454	0/0:16,1:17:14.52:0,15,366	0/0:21,0:21:42.12:0,42,483	0/0:19,0:19:49.39:0,49,557	1/1:1,15:16:44.32:283,44,0	0/0:32,0:32:75.22:0,75,866	0/0:30,0:30:87.15:0,87,944	0/0:13,1:14:14.54:0,15,373	0/0:12,0:12:21.03:0,21,218	0/0:18,0:18:33.07:0,33,368	0/0:15,1:16:33.07:0,33,369	0/0:14,0:14:33.08:0,33,368	0/0:11,0:11:24.06:0,24,269	0/0:20,0:21:54.11:0,54,599	0/0:20,0:20:42.12:0,42,485	0/0:28,0:28:60.13:0,60,675	0/0:5,0:5:12.04:0,12,138
chr10	49650514	.	TG	T	474.98	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.290;DP=529;FS=14.153;HRun=1;HaplotypeScore=100.8638;InbreedingCoeff=0.9273;MQ=67.42;MQ0=1;MQRankSum=-5.491;QD=27.94;ReadPosRankSum=1.385;VQSLOD=2.3057;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:63.26:0,63,523	0/0:5,0:5:15.03:0,15,209	0/0:26,1:17:16.35:0,16,328	0/0:12,0:9:15.03:0,15,194	0/0:19,0:19:50.76:0,51,702	0/0:19,0:19:31.03:0,31,495	0/0:14,0:14:39.13:0,39,594	0/0:28,0:28:81.22:0,81,1141	0/0:11,0:11:30.10:0,30,455	0/0:19,0:19:56.55:0,57,827	0/0:13,0:13:32.91:0,33,420	0/0:20,0:20:44.32:0,44,658	0/0:17,0:17:44.42:0,44,534	0/0:19,0:19:42.10:0,42,599	0/0:19,1:20:28.38:0,28,721	1/1:0,17:17:51.14:570,51,0	0/0:39,0:39:92.59:0,93,1320	0/0:33,0:33:99:0,99,1467	0/0:14,0:14:41.35:0,41,555	0/0:13,0:13:38.95:0,39,450	0/0:18,0:18:39.13:0,39,585	0/0:19,0:19:48.44:0,48,671	0/0:16,0:16:40.09:0,40,518	0/0:11,0:11:24.50:0,24,345	0/0:20,0:20:59.78:0,60,836	0/0:23,0:23:62.95:0,63,829	0/0:24,0:24:51.12:0,51,701	0/0:4,0:4:12.04:0,12,187
chr10	49650523	.	CTTT	C	5121.52	PASS	AB=0.652;AC=38;AF=0.679;AN=56;BaseQRankSum=-3.821;DP=518;FS=30.940;HRun=16;HaplotypeScore=101.0158;InbreedingCoeff=0.5867;MQ=63.62;MQ0=2;MQRankSum=-3.811;QD=13.07;ReadPosRankSum=3.565;VQSLOD=1.3588;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,1:33:67.49:418,67,0	0/1:2,0:4:12.52:13,0,37	0/0:31,0:19:17.33:0,17,240	0/0:10,0:7:9.03:0,9,131	1/1:7,13:21:7.47:297,7,0	1/1:5,16:22:32.77:340,33,0	1/1:6,7:14:11.57:114,12,0	1/1:10,12:25:36.90:386,37,0	1/1:6,5:12:17.75:179,18,0	1/1:8,7:16:16.04:191,16,0	0/1:4,9:13:1.70:201,0,2	0/0:10,0:17:19.84:0,20,67	0/1:6,2:15:35.66:75,0,36	0/1:10,6:16:6.27:142,0,6	0/0:10,0:17:1.31:0,1,214	1/1:5,0:17:35.05:211,35,0	1/1:7,30:38:61.34:675,61,0	1/1:14,16:32:48.96:530,49,0	1/1:7,7:15:20.60:207,21,0	1/1:4,8:12:20.71:224,21,0	1/1:9,7:18:6.93:79,7,0	0/0:12,0:21:27.45:0,27,170	0/0:5,0:18:18.92:0,19,105	0/0:5,0:10:4.98:0,5,11	1/1:10,8:20:28.06:290,28,0	1/1:16,7:24:23.38:243,23,0	1/1:5,15:21:26.62:276,27,0	1/1:3,1:4:2.99:32,3,0
chr10	49651640	.	CT	C	1316	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.370;DP=623;FS=1.878;HRun=7;HaplotypeScore=57.5328;InbreedingCoeff=0.9982;MQ=77.03;MQ0=0;MQRankSum=-0.603;QD=24.37;ReadPosRankSum=3.529;VQSLOD=4.0342;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,26:27:78.17:796,78,0	0/0:10,0:10:27.09:0,27,340	0/0:15,0:15:33.10:0,33,392	0/0:12,0:12:24.02:0,24,256	0/0:21,0:21:63.17:0,63,763	0/0:16,0:16:36.12:0,36,453	0/0:22,0:22:63.15:0,63,742	0/0:21,0:21:51.15:0,51,620	0/0:25,0:25:69.21:0,69,855	0/0:33,0:33:96.09:0,96,1174	0/0:15,0:15:42.13:0,42,528	0/0:25,0:25:75.21:0,75,916	0/0:17,0:17:51.16:0,51,641	0/0:22,0:22:63.19:0,63,780	0/0:29,0:29:78.25:0,78,981	1/1:4,23:27:62.84:642,63,0	0/0:30,0:30:84.27:0,84,1056	0/0:18,0:18:54.17:0,54,679	0/0:22,0:22:51.15:0,51,629	0/0:27,0:27:75.22:0,75,917	0/0:23,0:23:60.18:0,60,740	0/0:15,0:15:45.13:0,45,554	0/0:27,0:27:75.22:0,75,928	0/0:28,0:28:81.22:0,81,980	0/0:30,0:30:87.27:0,87,1081	0/0:31,0:31:78.24:0,78,968	0/0:19,0:19:54.17:0,54,679	0/0:16,0:16:42.07:0,42,474
chr10	49655596	.	A	AT	956.12	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-6.480;DP=671;FS=2.355;HRun=7;HaplotypeScore=62.6429;InbreedingCoeff=0.9981;MQ=81.78;MQ0=0;MQRankSum=-2.398;QD=30.84;ReadPosRankSum=0.006;VQSLOD=3.8991;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,30:31:87.27:1051,87,0	0/0:14,0:14:39.06:0,39,377	0/0:18,0:19:42.94:0,43,403	0/0:17,0:17:24.74:0,25,286	0/0:19,0:19:48.01:0,48,448	0/0:41,0:40:99:0,105,1014	0/0:18,0:18:54.03:0,54,499	0/0:28,0:28:78.12:0,78,750	0/0:15,0:15:45.07:0,45,435	0/0:37,0:37:99:0,102,978	0/0:20,0:20:54.08:0,54,521	0/0:24,0:24:72.10:0,72,689	0/0:23,0:23:66.11:0,66,637	0/0:15,0:15:39.04:0,39,372	0/0:33,0:33:90.11:0,90,857	0/0:25,0:25:66.07:0,66,624	0/0:24,0:24:66.08:0,66,630	0/0:24,0:24:69.11:0,69,666	0/0:32,0:32:72.08:0,72,685	0/0:22,0:22:66.09:0,66,628	0/0:19,0:19:54.05:0,54,509	0/0:22,0:22:60.06:0,60,569	0/0:26,0:26:78.12:0,78,749	0/0:21,0:21:60.04:0,60,565	0/0:25,0:25:72.12:0,72,695	0/0:30,0:30:87.03:0,87,815	0/0:26,0:26:78.08:0,78,736	0/0:21,0:21:54.06:0,54,513
chr10	49657983	.	AC	A	13582.54	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=12.882;DP=669;FS=0.981;HRun=4;HaplotypeScore=73.3596;InbreedingCoeff=0.9998;MQ=87.73;MQ0=0;MQRankSum=-3.434;QD=30.73;ReadPosRankSum=2.283;VQSLOD=5.3015;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,57:59:99:1654,138,0	1/1:0,10:10:27.08:324,27,0	0/0:21,0:21:51.16:0,51,691	0/0:24,0:24:69.18:0,69,909	1/1:0,21:21:60.15:704,60,0	0/0:21,0:21:60.20:0,60,838	0/0:23,0:23:63.19:0,63,853	1/1:4,25:29:69.21:826,69,0	0/0:26,0:26:72.22:0,72,989	1/1:2,22:24:66.18:775,66,0	1/1:0,11:11:33.10:395,33,0	0/0:22,0:22:57.19:0,57,798	0/0:20,0:20:57.19:0,57,792	1/1:0,23:23:60.18:719,60,0	1/1:1,20:21:54.17:647,54,0	1/1:2,20:22:47.92:575,48,0	1/1:1,32:33:84.26:1007,84,0	1/1:0,21:21:54.17:648,54,0	1/1:2,29:31:84.18:958,84,0	1/1:1,28:29:81.25:971,81,0	1/1:1,26:27:72.22:863,72,0	0/0:16,0:16:45.14:0,45,612	0/0:18,0:18:54.18:0,54,752	0/0:36,0:36:99:0,108,1492	1/1:1,17:18:45.14:540,45,0	1/1:2,18:20:51.15:610,51,0	1/1:1,28:29:75.23:899,75,0	1/1:0,14:14:39.12:468,39,0
chr10	49658485	.	CATCT	C	3503.06	PASS	AB=1.000;AC=24;AF=0.429;AN=56;BaseQRankSum=-9.381;DP=375;FS=31.118;HRun=0;HaplotypeScore=99.4592;InbreedingCoeff=0.5750;MQ=68.31;MQ0=7;MQRankSum=1.654;QD=18.53;ReadPosRankSum=-2.892;VQSLOD=1.3353;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:10.46:0,10,87	0/0:4,0:4:8.31:0,8,114	0/0:26,0:16:48.09:0,48,902	0/0:32,0:21:42.81:0,43,846	0/0:7,0:7:4.56:0,5,39	1/1:9,0:9:3.36:76,3,0	1/1:21,0:22:22.24:415,22,0	1/1:0,22:22:63.20:848,63,0	1/1:13,0:13:20.84:226,21,0	0/1:19,0:19:39.69:40,0,153	0/0:7,0:7:2.97:0,3,7	0/1:10,0:12:21.94:141,0,22	0/1:3,0:4:6.60:72,0,7	0/0:5,0:5:1.36:0,1,3	0/0:8,0:8:6.96:0,7,106	0/0:5,0:5:3.01:0,3,58	0/0:22,0:22:23.04:0,23,84	0/0:10,0:9:8.93:0,9,22	1/1:1,9:9:24.08:335,24,0	1/1:12,0:12:7.56:286,8,0	1/1:14,0:14:12.04:159,12,0	1/1:12,0:12:18.06:272,18,0	1/1:13,0:13:15.01:229,15,0	0/1:16,0:17:0.19:210,0,0	0/0:11,0:11:10.17:0,10,53	0/0:15,0:15:28.89:0,29,228	1/1:9,0:8:18.04:195,18,0	0/0:4,0:4:5.66:0,6,15
chr10	49658558	.	G	GA	37.26	PASS	AB=0.938;AC=10;AF=0.208;AN=48;BaseQRankSum=-1.801;DP=210;FS=0.000;HRun=0;HaplotypeScore=282.3952;InbreedingCoeff=-0.0720;MQ=30.33;MQ0=0;MQRankSum=-0.766;QD=0.47;ReadPosRankSum=-4.381;VQSLOD=1.3324;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:0,15:15:1.35:1,0,91	./.	./.	./.	0/0:5,0:5:6.39:0,6,40	0/0:9,0:9:5.08:0,5,94	0/1:5,0:5:9.76:10,0,19	0/0:9,0:9:9.31:0,9,70	0/1:9,0:9:4.50:5,0,43	0/0:10,0:10:9.22:0,9,132	0/0:8,0:8:1.18:0,1,49	0/0:5,0:5:11.50:0,12,72	0/1:6,0:6:19.88:20,0,40	0/0:6,0:6:12.67:0,13,93	0/0:12,0:12:8.85:0,9,57	0/0:1,4:5:9.64:0,10,52	0/0:11,0:11:14.52:0,15,166	0/1:5,0:5:8.23:8,0,36	0/0:6,0:6:16.38:0,16,78	0/1:12,0:12:23:23,0,52	1/1:6,0:6:8.27:39,8,0	0/0:13,0:13:9.82:0,10,120	0/1:13,0:13:42.62:43,0,57	0/0:6,0:6:2.59:0,3,10	0/1:9,0:9:14.41:14,0,25	0/0:13,0:13:32.37:0,32,167	0/0:10,0:10:19.45:0,19,125	./.
chr10	49660336	.	A	ATG	5762.10	PASS	AB=0.690;AC=42;AF=0.808;AN=52;BaseQRankSum=-4.501;DP=641;FS=0.000;HRun=0;HaplotypeScore=124.3720;InbreedingCoeff=0.1701;MQ=65.56;MQ0=5;MQRankSum=3.247;QD=10.40;ReadPosRankSum=-1.318;VQSLOD=4.3414;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:44,0:45:2.82:26,3,0	0/0:4,0:14:25.57:0,26,126	./.	./.	1/1:8,9:19:13.03:223,13,0	0/1:7,10:21:28.18:310,0,28	1/1:17,7:26:12.04:181,12,0	1/1:32,0:31:15.79:117,16,0	1/1:8,10:18:24.08:362,24,0	1/1:14,8:22:5.85:484,6,0	0/1:8,7:18:53.59:245,0,54	0/1:13,5:18:61.41:118,0,61	0/1:15,14:30:6.40:335,0,6	1/1:13,9:23:9.93:303,10,0	0/0:8,0:23:26.04:0,26,127	1/1:8,1:16:18:156,18,0	1/1:13,12:25:27.09:408,27,0	1/1:12,4:15:12.04:181,12,0	1/1:25,0:25:21.91:189,22,0	1/1:21,1:26:2.80:26,3,0	1/1:21,0:21:15.01:161,15,0	1/1:17,11:28:30.10:440,30,0	1/1:7,6:13:6.01:91,6,0	0/1:13,6:20:51.51:121,0,52	0/1:15,18:32:21.40:524,0,21	1/1:17,9:29:37.79:490,38,0	1/1:15,0:22:18.21:136,18,0	1/1:4,3:8:9.03:136,9,0
chr10	49661374	.	T	TCACA	303.61	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=4.862;DP=451;FS=6.575;HRun=0;HaplotypeScore=91.2832;InbreedingCoeff=0.3370;MQ=74.27;MQ0=11;MQRankSum=-0.052;QD=3.53;ReadPosRankSum=0.524;VQSLOD=1.3123;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:22:0.53:31,1,0	0/0:6,0:6:17.99:0,18,212	0/0:33,0:23:45.20:0,45,1039	0/0:29,0:20:60.20:0,60,1077	0/0:6,0:6:18.06:0,18,301	0/0:17,0:16:38.95:0,39,602	0/0:20,0:20:57.17:0,57,893	0/0:12,0:12:33.10:0,33,534	0/0:17,0:17:48.16:0,48,758	0/0:14,0:14:42.14:0,42,661	0/0:6,0:6:12.04:0,12,197	0/0:15,0:15:42.12:0,42,632	0/0:13,0:13:36.04:0,36,593	0/0:16,0:16:39.08:0,39,573	0/0:19,0:19:51.06:0,51,793	1/1:4,11:17:6.43:337,6,0	0/0:22,0:22:51.04:0,51,919	0/0:12,0:12:30.53:0,31,476	0/1:14,0:14:12.20:12,0,413	0/1:15,0:14:19.95:20,0,373	0/0:32,0:31:11.15:0,11,868	0/0:12,0:12:33.09:0,33,531	0/0:12,0:11:33.09:0,33,533	0/0:21,0:21:57.19:0,57,1016	0/0:16,0:15:33.08:0,33,498	0/0:11,0:11:33.10:0,33,550	0/1:17,0:17:25.22:25,0,381	0/0:4,0:4:12.04:0,12,192
chr10	49661375	.	GACAC	G	1055.04	PASS	AB=0.917;AC=12;AF=0.240;AN=50;BaseQRankSum=1.669;DP=492;FS=0.000;HRun=0;HaplotypeScore=86.5908;InbreedingCoeff=0.6544;MQ=72.04;MQ0=11;MQRankSum=-2.400;QD=11.72;ReadPosRankSum=0.956;VQSLOD=2.9710;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:6.02:0,6,100	0/0:3,0:6:9.03:0,9,159	./.	./.	0/0:7,0:7:2.68:0,3,11	0/0:15,0:16:14.43:0,14,236	0/0:21,0:23:21.07:0,21,461	0/0:13,0:13:5.99:0,6,78	0/0:19,0:19:17.78:0,18,306	./.	1/1:6,1:8:9.02:120,9,0	0/0:18,0:18:8.70:0,9,147	0/0:15,0:15:21.54:0,22,465	1/1:8,7:16:18.05:260,18,0	0/0:18,0:20:12.01:0,12,173	0/0:16,0:16:18.06:0,18,322	1/1:10,11:22:17.68:405,18,0	1/1:6,3:13:18.02:217,18,0	0/0:12,0:13:9.03:0,9,163	0/0:13,0:17:5.70:0,6,106	0/0:30,0:39:18.06:0,18,343	0/0:15,0:15:15.01:0,15,302	0/0:12,0:11:12.03:0,12,234	0/0:22,0:22:27.08:0,27,559	1/1:9,6:15:12.03:167,12,0	0/1:10,0:10:3.49:31,0,3	0/0:14,0:21:21.07:0,21,369	0/1:4,0:5:18.73:19,0,32
chr10	49661386	.	A	ACA	569.87	PASS	AB=1.000;AC=18;AF=0.360;AN=50;BaseQRankSum=-2.431;DP=541;FS=3.811;HRun=0;HaplotypeScore=79.3042;InbreedingCoeff=0.4311;MQ=55.16;MQ0=24;MQRankSum=0.070;QD=2.50;ReadPosRankSum=-0.149;VQSLOD=1.7377;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:24,4:28:5.86:80,6,0	1/1:6,0:6:9.03:130,9,0	./.	./.	0/0:16,0:16:2.84:0,3,14	0/0:19,0:18:11.69:0,12,92	0/1:25,0:25:32.06:32,0,84	1/1:15,0:15:0.89:2,1,0	0/0:22,0:22:8.85:0,9,78	./.	0/0:7,0:7:8.18:0,8,37	0/0:16,0:16:5.85:0,6,46	0/1:16,0:16:6.24:6,0,142	0/0:18,0:17:17.04:0,17,84	0/1:20,0:19:18.20:38,0,18	1/1:18,0:18:17.99:156,18,0	0/0:23,0:23:28.40:0,28,140	0/0:17,0:16:14.63:0,15,70	1/1:14,0:12:6:52,6,0	1/1:18,0:17:5.85:52,6,0	0/1:49,0:47:23.05:61,0,23	0/0:15,0:15:9.02:0,9,96	0/0:10,0:9:12.02:0,12,121	0/0:25,0:25:21.05:0,21,224	0/0:16,0:15:11.36:0,11,56	0/0:15,0:15:2.84:0,3,14	1/1:18,0:18:11.96:123,12,0	0/0:12,0:11:8.09:0,8,41
chr10	49661868	.	T	TAC	8484.25	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-11.397;DP=889;FS=6.788;HRun=0;HaplotypeScore=128.6884;InbreedingCoeff=0.9299;MQ=56.93;MQ0=20;MQRankSum=4.814;QD=18.05;ReadPosRankSum=1.360;VQSLOD=4.7103;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:60,0:60:52.23:0,52,410	1/1:1,8:9:17.98:256,18,0	0/0:37,0:14:12.57:0,13,91	0/0:57,0:28:20.40:0,20,196	0/0:23,0:23:54.11:0,54,601	1/1:4,16:20:39.13:619,39,0	1/1:11,17:28:8.99:144,9,0	1/1:24,24:48:77.49:806,77,0	1/1:13,20:33:21.39:752,21,0	0/0:32,0:32:74.77:0,75,820	0/0:21,0:23:47.90:0,48,508	1/1:11,27:40:5.74:550,6,0	1/1:8,17:23:20.21:487,20,0	0/0:41,0:41:95.98:0,96,1089	1/1:4,30:33:30.10:479,30,0	0/0:31,1:32:48.54:0,49,335	0/0:31,0:31:60.10:0,60,663	0/0:22,0:22:35.60:0,36,457	1/1:24,3:24:46.99:504,47,0	1/1:20,8:25:18.02:674,18,0	1/1:20,45:63:17.73:928,18,0	1/1:6,21:26:3.17:525,3,0	1/1:6,16:21:36.12:575,36,0	1/1:12,25:37:45.13:706,45,0	0/0:26,0:26:47.71:0,48,539	0/0:21,0:21:51.13:0,51,588	1/1:16,8:22:5.99:479,6,0	0/0:11,0:11:24.07:0,24,287
chr10	49661886	.	CAT	C	909.86	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=3.757;DP=866;FS=4.149;HRun=0;HaplotypeScore=163.9759;InbreedingCoeff=0.9949;MQ=55.44;MQ0=18;MQRankSum=0.336;QD=9.89;ReadPosRankSum=1.710;VQSLOD=3.0850;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:24,31:55:49.70:569,50,0	0/0:9,0:9:21.05:0,21,230	0/0:28,0:12:26.34:0,26,232	0/0:43,0:15:31.94:0,32,395	0/0:22,0:22:54.11:0,54,811	0/0:20,0:20:44.84:0,45,500	0/0:28,0:28:23.96:0,24,229	0/0:45,0:44:99:0,105,1028	0/0:33,0:32:75.14:0,75,868	0/0:37,0:37:73.33:0,73,1328	0/0:25,0:25:51.02:0,51,832	0/0:37,0:37:56.59:0,57,639	0/0:24,0:22:46.92:0,47,532	0/0:39,0:39:94.82:0,95,1621	0/0:37,0:36:54.07:0,54,558	1/1:17,20:37:34.34:462,34,0	0/0:25,0:25:63.15:0,63,981	0/0:23,0:23:51.86:0,52,745	0/0:28,0:26:60.54:0,61,535	0/0:31,0:28:56.76:0,57,616	0/0:62,0:61:96.14:0,96,1054	0/0:30,0:30:63.10:0,63,690	0/0:19,0:18:45.08:0,45,511	0/0:36,0:35:62.80:0,63,697	0/0:19,0:19:47.85:0,48,725	0/0:33,0:33:93.10:0,93,1178	0/0:29,0:28:62.95:0,63,609	0/0:9,0:9:24.08:0,24,410
chr10	49661922	.	GAC	G	1293.11	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.229;DP=889;FS=9.275;HRun=0;HaplotypeScore=172.4644;InbreedingCoeff=0.9179;MQ=56.02;MQ0=25;MQRankSum=0.358;QD=14.86;ReadPosRankSum=-0.834;VQSLOD=3.0329;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:14,30:44:43.40:507,43,0	0/0:9,0:9:18.06:0,18,288	0/0:48,0:14:26.46:0,26,317	0/0:48,0:17:21.80:0,22,243	0/0:18,0:18:42.10:0,42,626	0/0:15,0:15:32.85:0,33,488	0/0:33,0:33:62.77:0,63,944	0/0:38,0:35:64.22:0,64,726	0/0:45,0:44:99:0,101,1512	0/0:39,1:39:29.01:0,29,1114	0/0:25,0:25:72.25:0,72,1175	0/0:42,0:42:87.03:0,87,1371	0/0:19,0:19:39.13:0,39,619	0/0:29,0:29:56.55:0,57,1102	0/0:42,0:42:71.89:0,72,1127	1/1:11,32:43:74.02:907,74,0	0/0:25,0:24:59.14:0,59,841	0/0:29,0:29:48.24:0,48,858	0/0:27,0:23:50.77:0,51,304	0/0:33,0:32:54.60:0,55,306	0/0:51,1:50:69.55:0,70,488	0/0:30,0:30:66.19:0,66,1032	0/0:28,0:27:58.62:0,59,797	0/0:29,0:28:53.11:0,53,783	0/0:15,0:15:3.73:0,4,538	0/0:40,0:40:99:0,108,1733	0/0:35,0:34:49.88:0,50,253	0/0:8,0:8:24.01:0,24,334
chr10	49661936	.	GAC	G	5305.78	PASS	AB=0.910;AC=20;AF=0.357;AN=56;BaseQRankSum=13.384;DP=865;FS=5.148;HRun=0;HaplotypeScore=143.0885;InbreedingCoeff=0.5227;MQ=55.31;MQ0=24;MQRankSum=-2.539;QD=13.07;ReadPosRankSum=-0.004;VQSLOD=4.5633;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,28:41:32.83:384,33,0	0/0:9,0:9:15.05:0,15,242	0/0:48,0:14:23.92:0,24,237	0/0:46,0:10:8.05:0,8,86	0/0:17,0:17:42.12:0,42,650	0/1:11,1:12:10.43:10,0,365	0/1:29,1:30:8.58:9,0,996	1/1:13,26:36:71.90:825,72,0	0/0:40,2:41:15.32:0,15,1250	0/0:34,1:35:22.44:0,22,1253	0/0:25,0:25:60.20:0,60,980	0/0:42,1:43:43.75:0,44,1229	0/0:19,0:19:48.08:0,48,729	0/0:27,0:27:60.23:0,60,972	0/0:41,1:42:37.74:0,38,1134	1/1:13,31:45:87.16:1026,87,0	0/1:19,3:21:18.33:18,0,710	0/1:23,6:29:66.40:66,0,696	1/1:7,20:23:63.18:762,63,0	1/1:4,26:30:54:652,54,0	1/1:28,17:43:66.18:798,66,0	0/0:35,0:35:69.22:0,69,1094	0/1:21,3:23:61.37:61,0,634	0/1:30,1:30:20.82:21,0,730	0/0:19,0:19:7.03:0,7,594	0/0:43,1:44:82.86:0,83,1832	1/1:3,27:29:57:672,57,0	0/0:7,0:7:18.06:0,18,297
chr10	49662717	.	A	AGGACCTCT	2279.06	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-6.739;DP=535;FS=0.885;HRun=0;HaplotypeScore=139.7139;InbreedingCoeff=0.8299;MQ=57.93;MQ0=18;MQRankSum=-7.039;QD=20.53;ReadPosRankSum=-1.676;VQSLOD=3.1040;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:54.19:0,54,1296	0/0:2,0:5:9.03:0,9,142	0/0:35,0:18:8.79:0,9,106	0/0:23,0:13:19.29:0,19,302	0/0:21,0:21:45.15:0,45,1103	1/1:11,6:18:18.06:738,18,0	1/1:14,4:24:6.02:236,6,0	0/0:31,0:31:42.09:0,42,645	1/1:4,5:15:9.03:369,9,0	0/0:19,0:19:27.09:0,27,676	0/0:18,0:18:30.10:0,30,748	1/1:7,1:9:3.01:123,3,0	1/1:6,3:9:9.03:369,9,0	0/0:18,0:18:33.10:0,33,774	0/0:5,0:14:25.33:0,25,442	0/0:27,0:27:48.13:0,48,1056	0/0:30,0:30:42.11:0,42,889	0/0:10,0:10:14.99:0,15,269	0/0:16,0:15:15.02:0,15,375	0/0:21,0:21:33.09:0,33,728	0/0:28,0:28:60.19:0,60,1369	1/1:7,5:13:12.04:492,12,0	1/1:8,2:11:2.98:123,3,0	1/1:8,1:12:0.47:1,0,0	0/0:19,0:19:24.08:0,24,577	0/0:17,0:17:33.11:0,33,827	0/0:14,0:14:27.09:0,27,678	0/0:20,0:20:33.11:0,33,828
chr10	49663308	.	GTT	G	308.22	PASS	AC=2;AF=0.037;AN=54;BaseQRankSum=1.725;DP=645;FS=1.185;HRun=8;HaplotypeScore=100.5085;InbreedingCoeff=0.9988;MQ=85.22;MQ0=0;MQRankSum=-1.885;QD=25.68;ReadPosRankSum=1.135;VQSLOD=3.3403;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,126,2100	0/0:12,0:12:33.11:0,33,556	0/0:25,0:25:66.22:0,66,1055	0/0:18,0:18:29.78:0,30,421	0/0:36,0:36:99:0,102,1716	0/0:19,0:20:51.17:0,51,841	0/0:18,0:18:54.18:0,54,913	0/0:35,0:35:90.30:0,90,1498	0/0:24,0:24:69.24:0,69,1165	0/0:31,0:31:87.30:0,87,1462	0/0:28,0:28:81.28:0,81,1367	0/0:16,0:16:45.15:0,45,759	0/0:20,0:20:57.19:0,57,959	0/0:21,0:21:60.20:0,60,988	0/0:23,0:23:63.22:0,63,1063	1/1:0,12:12:33.10:403,33,0	0/0:25,0:25:66.21:0,66,1083	0/0:15,0:15:39.09:0,39,616	0/0:17,0:17:48.16:0,48,810	0/0:37,0:37:99:0,102,1720	0/0:17,0:17:45.15:0,45,760	0/0:25,0:25:72.25:0,72,1215	0/0:24,0:24:63.19:0,63,1033	0/0:26,0:26:75.26:0,75,1264	0/0:19,0:19:57.20:0,57,962	0/0:27,0:27:78.26:0,78,1277	0/0:28,0:28:78.24:0,78,1287	./.
chr10	49664800	.	CA	C	1034.47	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.392;DP=583;FS=1.447;HRun=2;HaplotypeScore=69.5432;InbreedingCoeff=0.9834;MQ=76.16;MQ0=0;MQRankSum=-5.318;QD=32.33;ReadPosRankSum=0.696;VQSLOD=3.4930;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,105,1470	1/1:1,9:10:27.08:333,27,0	0/0:13,0:13:38.02:0,38,447	0/0:12,0:11:29.37:0,29,352	0/0:31,0:31:90.23:0,90,1238	0/0:22,0:22:55.68:0,56,889	0/0:22,0:22:66.22:0,66,956	0/0:20,0:20:60.19:0,60,860	0/0:19,0:19:54.16:0,54,769	0/0:19,0:19:51.15:0,51,723	0/0:18,0:18:48.11:0,48,645	0/0:34,0:34:91.62:0,92,1284	0/0:20,0:20:59.19:0,59,796	0/0:17,0:17:51.17:0,51,761	1/1:1,21:22:66.14:823,66,0	0/0:28,0:28:78.23:0,78,1106	0/0:15,0:15:45.14:0,45,651	0/0:27,0:27:81.25:0,81,1186	0/0:16,0:16:48.11:0,48,673	0/0:13,0:13:38.91:0,39,532	0/0:20,0:20:57.19:0,57,849	0/0:23,0:23:66.16:0,66,899	0/0:23,0:23:62.11:0,62,847	0/0:27,0:27:81.27:0,81,1209	0/0:17,0:17:48.15:0,48,679	0/0:32,0:32:93.27:0,93,1294	0/0:23,0:23:69.22:0,69,1009	0/0:5,0:5:12.04:0,12,179
chr10	49664831	.	AATGTGACC	A	2102.06	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.441;DP=614;FS=0.000;HRun=0;HaplotypeScore=156.4600;InbreedingCoeff=0.9908;MQ=88.92;MQ0=0;MQRankSum=-7.490;QD=65.69;ReadPosRankSum=-1.274;VQSLOD=3.1753;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,126,5423	1/1:2,8:10:24.08:684,24,0	0/0:29,0:29:83.76:0,84,3268	0/0:17,0:17:46:0,46,1690	0/0:25,0:25:75.26:0,75,3256	0/0:19,0:19:57.18:0,57,2447	0/0:18,0:18:54.17:0,54,2133	0/0:24,0:24:72.25:0,72,3017	0/0:15,0:15:45.15:0,45,2031	0/0:20,0:20:60.19:0,60,2550	0/0:14,0:14:42.14:0,42,1752	0/0:32,0:32:96.32:0,96,4238	0/0:24,0:24:72.25:0,72,3174	0/0:14,0:14:42.14:0,42,1903	1/1:2,20:22:54.19:1539,54,0	0/0:23,0:23:66.23:0,66,2804	0/0:20,0:20:60.21:0,60,2626	0/0:32,0:32:96.31:0,96,4106	0/0:18,0:18:54.19:0,54,2317	0/0:14,0:14:39.13:0,39,1702	0/0:36,0:36:99:0,108,4791	0/0:19,0:19:54.19:0,54,2382	0/0:18,0:18:54.19:0,54,2243	0/0:38,0:38:99:0,114,5066	0/0:18,0:18:54.19:0,54,2411	0/0:27,0:27:75.25:0,75,3178	0/0:19,0:19:57.20:0,57,2552	0/0:6,0:6:15.05:0,15,680
chr10	49664919	.	ATG	A	871.45	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.723;DP=666;FS=0.000;HRun=0;HaplotypeScore=82.5839;InbreedingCoeff=0.9955;MQ=88.46;MQ0=0;MQRankSum=-3.870;QD=31.12;ReadPosRankSum=2.082;VQSLOD=5.2384;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,157,2872	1/1:2,6:8:18.06:265,18,0	0/0:24,0:24:60.21:0,60,1104	0/0:25,0:25:69.24:0,69,1258	0/0:19,0:19:54.19:0,54,1011	0/0:16,0:16:48.16:0,48,899	0/0:25,0:25:72.25:0,72,1329	0/0:16,0:16:45.15:0,45,843	0/0:18,0:18:54.19:0,54,997	0/0:19,0:19:54.18:0,54,1003	0/0:15,0:15:42.13:0,42,755	0/0:23,0:23:69.24:0,69,1292	0/0:20,0:20:57.18:0,57,1035	0/0:18,0:18:54.19:0,54,1010	1/1:2,18:20:51.13:726,51,0	0/0:21,0:21:60.19:0,60,1093	0/0:38,0:37:99:0,111,2057	0/0:27,0:27:75.26:0,75,1392	0/0:23,0:23:69.23:0,69,1238	0/0:29,0:29:81.28:0,81,1516	0/0:64,0:64:99:0,184,3393	0/0:18,0:18:54.19:0,54,1011	0/0:13,0:13:39.13:0,39,730	0/0:30,0:29:90.29:0,90,1652	0/0:26,0:26:69.15:0,69,1292	0/0:21,0:21:60.20:0,60,1085	0/0:23,0:23:69.24:0,69,1292	0/0:12,0:12:30.10:0,30,562
chr10	49665342	.	TTAA	T	1093.14	PASS	AB=1.000;AC=6;AF=0.107;AN=56;BaseQRankSum=3.278;DP=580;FS=9.841;HRun=0;HaplotypeScore=142.7023;InbreedingCoeff=0.5365;MQ=72.26;MQ0=0;MQRankSum=-3.652;QD=14.97;ReadPosRankSum=-4.977;VQSLOD=1.7635;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:90.26:0,90,1957	1/1:1,6:7:17.98:286,18,0	0/0:21,0:19:34.67:0,35,651	0/0:19,0:18:40.83:0,41,640	0/0:20,0:21:59.96:0,60,706	0/0:24,0:24:39.65:0,40,183	0/0:16,0:16:26.77:0,27,111	0/0:30,0:30:3.69:0,4,240	0/0:19,0:19:2.55:0,3,102	0/0:22,0:22:66.18:0,66,763	0/0:24,0:24:65.23:0,65,777	0/0:15,0:15:29.46:0,29,149	0/0:23,0:23:36.97:0,37,146	0/0:14,0:14:36.07:0,36,396	1/1:2,18:20:59.96:897,60,0	0/0:24,0:24:60.18:0,60,718	0/0:27,0:27:69.21:0,69,823	0/0:16,0:16:39.05:0,39,427	0/0:25,0:25:35.48:0,35,266	0/1:29,0:29:35.59:36,0,218	0/0:9,0:9:24.17:0,24,121	0/0:28,0:28:4.71:0,5,91	0/1:17,0:17:1.77:2,0,129	0/0:28,0:28:42.27:0,42,151	0/0:24,0:24:62.68:0,63,702	0/0:21,0:21:63.18:0,63,733	0/0:22,0:22:50.21:0,50,246	0/0:4,0:4:6:0,6,60
chr10	49665343	.	TA	T	7914.62	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=3.381;DP=574;FS=14.504;HRun=11;HaplotypeScore=96.8394;InbreedingCoeff=0.9203;MQ=72.00;MQ0=0;MQRankSum=-4.009;QD=15.64;ReadPosRankSum=1.610;VQSLOD=4.1831;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,1:30:53.37:0,53,743	1/1:7,0:7:11.09:33,11,0	0/0:20,0:18:23.26:0,23,216	0/0:17,0:16:24.04:0,24,240	1/1:3,18:21:44.59:405,45,0	1/1:3,20:23:53.93:443,54,0	1/1:3,13:16:41.94:342,42,0	1/1:3,0:30:57.23:175,57,0	1/1:3,16:19:50.30:402,50,0	1/1:5,16:21:47.90:389,48,0	1/1:2,22:24:65.88:536,66,0	1/1:3,12:15:35.94:295,36,0	1/1:2,21:23:56.93:468,57,0	1/1:2,11:13:26.97:222,27,0	1/1:20,0:20:33.49:103,33,0	1/1:0,24:24:59.93:493,60,0	1/1:0,27:27:68.92:566,69,0	1/1:2,14:16:32.96:271,33,0	1/1:2,0:24:43.95:131,44,0	1/1:3,0:29:53.57:167,54,0	1/1:2,0:9:14.26:41,14,0	1/1:4,23:29:80.23:603,80,0	1/1:8,11:19:42.78:305,43,0	1/1:2,25:27:68.92:566,69,0	1/1:5,18:24:46.97:375,47,0	1/1:1,19:20:56.92:465,57,0	1/1:3,0:22:32.58:94,33,0	1/1:1,3:4:3:25,3,0
chr10	49665367	.	CATT	C	791.52	PASS	AB=1.000;AC=6;AF=0.107;AN=56;BaseQRankSum=7.819;DP=548;FS=0.000;HRun=0;HaplotypeScore=129.0213;InbreedingCoeff=0.6331;MQ=68.88;MQ0=0;MQRankSum=-5.724;QD=18.41;ReadPosRankSum=-0.941;VQSLOD=3.3830;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:99:0,99,2079	1/1:1,7:8:21.03:310,21,0	0/1:11,0:10:6.67:7,0,163	0/1:11,0:10:40.27:40,0,44	0/0:30,0:30:90.30:0,90,1904	0/0:19,0:19:51.16:0,51,1082	0/0:20,0:20:57.18:0,57,1187	0/0:31,0:31:84.27:0,84,1751	0/0:21,0:21:57.18:0,57,1200	0/0:23,0:23:66.23:0,66,1437	0/0:27,0:27:78.25:0,78,1630	0/0:13,0:13:36.12:0,36,793	0/0:20,0:20:57.15:0,57,1112	0/0:11,0:11:30.07:0,30,576	1/1:3,10:13:36.08:567,36,0	0/0:23,0:23:63.19:0,63,1246	0/0:23,0:23:54.13:0,54,1028	0/0:14,0:14:30.10:0,30,629	0/0:24,0:24:69.21:0,69,1377	0/0:29,0:29:87.27:0,87,1803	0/0:10,0:10:30.10:0,30,661	0/0:30,0:30:87.30:0,87,1918	0/0:13,0:13:39.13:0,39,812	0/0:25,0:25:72.23:0,72,1508	0/0:20,0:20:54.17:0,54,1138	0/0:23,0:23:66.22:0,66,1416	0/0:18,0:18:51.16:0,51,1065	0/0:5,0:5:9.03:0,9,198
chr10	49665404	.	T	TG	677.82	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.216;DP=579;FS=3.260;HRun=1;HaplotypeScore=84.8375;InbreedingCoeff=0.9912;MQ=77.38;MQ0=0;MQRankSum=-7.110;QD=30.81;ReadPosRankSum=0.564;VQSLOD=3.3893;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:93.24:0,93,1158	1/1:0,10:10:24.08:357,24,0	0/0:19,0:19:48.10:0,48,579	0/0:9,0:9:23.93:0,24,281	0/0:33,0:33:99:0,99,1268	0/0:19,0:19:51.17:0,51,662	0/0:12,0:12:36.05:0,36,446	0/0:25,0:25:72.20:0,72,879	0/0:26,0:26:75.23:0,75,959	0/0:29,0:29:87.28:0,87,1129	0/0:37,0:37:99:0,111,1395	0/0:13,0:13:39.11:0,39,491	0/0:19,0:19:54.15:0,54,674	0/0:9,0:9:21.07:0,21,273	1/1:1,11:12:30.10:441,30,0	0/0:18,0:18:48.14:0,48,609	0/0:27,0:27:69.16:0,69,832	0/0:15,0:15:36.12:0,36,467	0/0:20,0:20:60.15:0,60,760	0/0:24,0:24:66.19:0,66,827	0/0:14,0:14:42.09:0,42,513	0/0:25,0:25:75.22:0,75,945	0/0:18,0:18:54.15:0,54,662	0/0:29,0:29:84.26:0,84,1075	0/0:26,0:26:69.21:0,69,872	0/0:27,0:27:81.25:0,81,1027	0/0:25,0:25:72.23:0,72,933	0/0:8,0:8:18.06:0,18,233
chr10	49665645	.	AT	A	828.32	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.284;DP=585;FS=1.720;HRun=1;HaplotypeScore=55.0012;InbreedingCoeff=0.9732;MQ=87.19;MQ0=0;MQRankSum=-3.252;QD=37.65;ReadPosRankSum=0.316;VQSLOD=3.8785;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:84.29:0,84,1334	0/0:6,0:6:18.06:0,18,287	0/0:25,0:25:69.20:0,69,1014	0/0:15,0:15:16.53:0,17,597	0/0:27,0:27:81.25:0,81,1238	0/0:24,0:24:72.25:0,72,1151	0/0:12,0:12:36.11:0,36,548	0/0:25,0:25:66.22:0,66,1036	0/0:26,0:26:78.25:0,78,1215	0/0:18,0:18:54.18:0,54,864	0/0:23,0:23:69.24:0,69,1102	0/0:17,0:17:51.17:0,51,815	0/0:19,0:19:57.16:0,57,883	0/0:15,0:15:45.14:0,45,696	0/0:29,0:29:84.29:0,84,1340	1/1:0,22:22:66.22:923,66,0	0/0:20,0:20:57.18:0,57,887	0/0:19,0:19:54.18:0,54,861	0/0:12,0:12:36.11:0,36,549	0/0:27,0:27:81.28:0,81,1278	0/0:24,0:24:69.23:0,69,1089	0/0:19,0:19:57.19:0,57,911	0/0:26,0:26:78.27:0,78,1247	0/0:23,0:23:69.24:0,69,1103	0/0:19,0:19:57.19:0,57,911	0/0:22,0:22:66.21:0,66,1034	0/0:36,0:35:99:0,108,1714	0/0:6,0:6:18.06:0,18,288
chr10	49666867	.	G	GGAAGAG	12827.55	PASS	AB=0.876;AC=54;AF=0.964;AN=56;BaseQRankSum=0.037;DP=347;FS=23.048;HRun=0;HaplotypeScore=243.6584;InbreedingCoeff=-0.0511;MQ=75.04;MQ0=0;MQRankSum=-5.964;QD=36.97;ReadPosRankSum=1.786;VQSLOD=3.0770;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:15:32.72:475,33,0	1/1:6,0:6:8.43:240,8,0	0/1:11,0:14:99:199,0,169	0/1:12,1:13:99:122,0,161	1/1:11,0:11:22.01:268,22,0	1/1:11,0:12:35.48:540,35,0	1/1:12,0:12:35.33:520,35,0	1/1:17,0:17:48.16:898,48,0	1/1:15,0:15:38.51:657,39,0	1/1:11,0:11:30.10:602,30,0	1/1:7,0:7:17.88:192,18,0	1/1:15,0:15:42.56:550,43,0	1/1:13,0:14:42.12:581,42,0	1/1:18,0:18:48.46:695,48,0	1/1:17,0:17:47.99:622,48,0	1/1:16,0:16:38.56:515,39,0	1/1:8,0:8:15.05:231,15,0	1/1:5,0:5:12.04:198,12,0	1/1:16,0:16:48.14:888,48,0	1/1:10,0:10:27.97:358,28,0	1/1:10,0:10:21.54:288,22,0	1/1:13,0:13:32.65:488,33,0	1/1:17,0:17:34.85:462,35,0	1/1:10,0:10:24.94:344,25,0	1/1:19,0:20:56.83:761,57,0	1/1:12,0:12:33:507,33,0	1/1:11,0:11:30.99:535,31,0	1/1:2,0:2:0.57:91,1,0
chr10	49667389	.	T	TAC	923.99	PASS	AB=0.926;AC=39;AF=0.750;AN=52;BaseQRankSum=-1.268;DP=369;FS=2.396;HRun=0;HaplotypeScore=192.1846;InbreedingCoeff=0.0418;MQ=30.40;MQ0=5;MQRankSum=-1.328;QD=2.67;ReadPosRankSum=-2.047;VQSLOD=2.2760;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:21:1.98:8,2,0	1/1:9,0:9:2.88:15,3,0	./.	./.	1/1:12,0:11:1.55:4,2,0	0/1:15,1:16:39.14:54,0,39	0/1:20,2:21:23.67:72,0,24	1/1:19,0:17:10.73:88,11,0	0/1:17,1:18:21.51:22,0,43	1/1:13,0:11:3.15:12,3,0	1/1:14,0:14:5.96:44,6,0	0/1:10,4:14:4.80:150,0,5	0/0:10,1:11:2.70:0,3,12	1/1:14,0:15:5.79:63,6,0	1/1:8,3:12:9:91,9,0	0/0:12,0:12:3.73:0,4,16	1/1:10,0:11:11.51:90,12,0	1/1:6,0:4:3:26,3,0	1/1:13,0:12:2.98:22,3,0	0/1:11,0:11:0.93:52,0,1	0/1:28,0:27:0.02:0,0,0	0/1:15,3:18:0:0,0,0	0/1:7,0:7:0:0,0,0	0/1:21,2:21:24.20:76,0,24	1/1:11,0:12:2.98:22,3,0	1/1:15,0:15:7.81:57,8,0	1/1:11,2:13:5.90:63,6,0	1/1:1,0:1:2.84:14,3,0
chr10	49667419	.	CACACACACACACAA	C	477.14	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.043;DP=584;FS=15.747;HRun=0;HaplotypeScore=252.5564;InbreedingCoeff=0.9657;MQ=42.32;MQ0=18;MQRankSum=-1.290;QD=31.81;ReadPosRankSum=0.419;VQSLOD=1.5511;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:40.60:0,41,301	0/0:16,0:15:24.80:0,25,594	0/0:22,0:12:35.91:0,36,421	0/0:22,0:14:23.18:0,23,413	0/0:16,0:16:21.40:0,21,288	0/0:23,0:23:51.18:0,51,712	0/0:26,0:25:57.21:0,57,1690	0/0:24,0:21:63.07:0,63,1303	0/0:25,0:25:56.63:0,57,1273	0/0:21,0:19:52.50:0,53,963	0/0:19,0:19:21.51:0,22,220	0/0:30,0:29:73.15:0,73,1763	0/0:17,0:17:37.45:0,37,394	0/0:21,0:21:33.41:0,33,812	0/0:16,0:16:30.60:0,31,459	1/1:11,4:15:29.51:572,30,0	0/0:13,0:14:32.53:0,33,479	0/0:12,0:8:14.98:0,15,251	0/0:13,0:10:28.24:0,28,721	0/0:24,0:23:47.92:0,48,1383	0/0:43,0:40:78.86:0,79,889	0/0:22,0:21:35.33:0,35,293	0/0:13,0:12:27.74:0,28,409	0/0:35,0:34:59.10:0,59,1087	0/0:21,0:21:38.46:0,38,564	0/0:18,0:17:45.61:0,46,1552	0/0:18,0:18:40.42:0,40,778	0/0:8,0:8:21.02:0,21,396
chr10	49667469	.	T	TAC	5607.58	PASS	AB=0.653;AC=15;AF=0.268;AN=56;BaseQRankSum=-9.973;DP=763;FS=2.205;HRun=0;HaplotypeScore=171.9514;InbreedingCoeff=0.6123;MQ=60.50;MQ0=4;MQRankSum=0.668;QD=24.17;ReadPosRankSum=1.978;VQSLOD=5.1420;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:37:72.02:0,72,814	0/0:10,0:11:23.90:0,24,263	0/1:41,0:30:1.18:1,0,189	0/0:39,0:31:31.56:0,32,336	1/1:2,18:20:48.16:766,48,0	0/0:25,1:26:5.64:0,6,492	0/0:27,0:27:57.47:0,57,656	0/0:36,0:36:75.22:0,75,895	0/0:22,0:23:38.96:0,39,417	0/1:9,19:28:99:793,0,142	1/1:7,17:25:45.15:721,45,0	0/0:31,0:31:63.05:0,63,710	0/0:21,0:21:54.16:0,54,651	0/1:3,19:22:0.98:624,0,1	0/0:14,0:15:23.84:0,24,249	0/0:40,0:41:96.07:0,96,1103	0/1:5,17:23:38.69:578,0,39	1/1:3,10:12:24.08:368,24,0	0/0:11,0:10:21.04:0,21,238	0/0:21,0:21:48.15:0,48,579	0/0:78,0:79:99:0,180,2047	0/0:28,0:29:60:0,60,690	0/0:21,0:21:42.08:0,42,483	0/0:39,0:40:71.85:0,72,791	1/1:4,20:24:21.01:828,21,0	1/1:8,16:24:42.58:616,43,0	0/0:22,0:21:48.06:0,48,544	0/1:2,8:9:12.09:313,0,12
chr10	49667543	.	TAC	T	1143.67	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.096;DP=844;FS=1.412;HRun=0;HaplotypeScore=145.4578;InbreedingCoeff=0.9992;MQ=55.62;MQ0=1;MQRankSum=0.043;QD=30.91;ReadPosRankSum=-0.278;VQSLOD=5.2688;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,126,2129	0/0:15,0:15:42.14:0,42,713	0/0:27,0:20:30.86:0,31,779	0/0:30,0:26:51.16:0,51,770	0/0:28,0:28:69.24:0,69,1165	0/0:27,0:27:75.26:0,75,1267	0/0:28,0:28:72.25:0,72,1207	0/0:43,0:42:99:0,102,1724	0/0:32,0:32:81.28:0,81,1364	0/0:37,0:37:99:0,105,1784	0/0:25,0:25:57.20:0,57,965	0/0:23,0:23:66.23:0,66,1119	0/0:17,0:17:42.14:0,42,713	0/0:21,0:21:33.11:0,33,560	0/0:28,0:28:81.28:0,81,1370	1/1:4,33:37:96.31:1239,96,0	0/0:31,0:31:69.24:0,69,1161	0/0:24,0:24:60.20:0,60,1001	0/0:22,0:20:42.08:0,42,652	0/0:23,0:23:66.23:0,66,1117	0/0:82,0:82:99:0,211,3532	0/0:26,0:26:69.24:0,69,1172	0/0:24,0:24:54.18:0,54,918	0/0:43,0:43:84.23:0,84,1350	0/0:21,0:21:54.18:0,54,913	0/0:30,0:30:78.27:0,78,1325	0/0:26,0:26:69.24:0,69,1172	0/0:19,0:18:48.16:0,48,815
chr10	49667629	.	AACACACACACACACACAC	A	5066.29	PASS	AB=0.729;AC=26;AF=0.464;AN=56;BaseQRankSum=3.425;DP=658;FS=15.371;HRun=0;HaplotypeScore=267.1237;InbreedingCoeff=0.3657;MQ=50.59;MQ0=27;MQRankSum=-2.136;QD=13.23;ReadPosRankSum=1.944;VQSLOD=2.2561;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:47:33.67:0,34,631	0/0:7,0:9:9.03:0,9,203	0/0:23,0:6:0.94:0,1,1	0/1:32,0:17:0:0,0,0	1/1:9,11:20:8.94:163,9,0	0/1:12,0:24:43.95:44,0,103	0/0:21,0:18:12.86:0,13,236	0/0:26,0:23:19.31:0,19,251	0/0:8,0:17:2.51:0,3,114	0/1:7,16:23:23.97:649,0,24	1/1:9,13:21:15:558,15,0	0/1:15,0:27:33.21:33,0,232	0/1:13,0:23:35.42:35,0,209	1/1:3,16:19:13.20:830,13,0	0/0:20,0:23:29.48:0,29,697	1/1:38,4:42:18.06:1234,18,0	1/1:14,20:34:5.92:38,6,0	0/1:22,2:22:99:435,0,246	0/0:16,0:12:18.53:0,19,271	0/0:9,0:17:12.23:0,12,253	0/0:46,0:41:22.01:0,22,507	0/1:4,0:17:5.85:36,0,6	1/1:3,0:8:2.44:6,2,0	0/1:20,0:31:0.04:0,0,31	1/1:9,0:9:9.64:90,10,0	1/1:7,12:19:9.18:766,9,0	0/0:16,0:27:15.15:0,15,348	1/1:1,3:4:3.48:147,3,0
chr10	49668044	.	A	AACAC	2122.80	PASS	AB=0.751;AC=32;AF=0.615;AN=52;BaseQRankSum=-3.151;DP=539;FS=8.694;HRun=0;HaplotypeScore=118.6411;InbreedingCoeff=0.2909;MQ=62.76;MQ0=18;MQRankSum=0.433;QD=5.77;ReadPosRankSum=-3.725;VQSLOD=-0.1591;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:16,10:29:8.77:128,9,0	0/0:3,0:6:6.01:0,6,56	./.	./.	1/1:14,1:22:2.65:52,3,0	1/1:8,0:17:8.23:37,8,0	0/1:16,0:17:4.55:96,0,5	0/0:15,0:14:2.14:0,2,45	0/1:9,0:18:28.95:29,0,118	1/1:15,11:27:45.14:749,45,0	0/1:18,2:24:17.11:142,0,17	0/1:8,0:15:37.83:74,0,38	0/1:12,0:17:16.02:16,0,38	1/1:9,4:18:5.75:83,6,0	0/0:9,0:21:30.03:0,30,279	1/1:10,0:10:6:93,6,0	1/1:9,5:17:5.98:110,6,0	1/1:13,1:22:6.23:83,6,0	0/0:9,0:13:9.01:0,9,84	0/0:11,0:15:5.80:0,6,56	0/0:16,0:23:14.93:0,15,129	1/1:6,0:10:8.23:37,8,0	1/1:13,0:23:5.49:25,5,0	0/1:16,0:31:27.29:54,0,27	1/1:14,0:19:3.01:51,3,0	1/1:16,0:19:26.98:320,27,0	0/0:11,0:15:15.02:0,15,158	1/1:8,2:11:8.15:115,8,0
chr10	49668254	.	T	TACACCAGGTTAG	1857.64	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.882;DP=649;FS=0.948;HRun=0;HaplotypeScore=219.4660;InbreedingCoeff=0.9947;MQ=87.87;MQ0=0;MQRankSum=-4.969;QD=109.27;ReadPosRankSum=-0.202;VQSLOD=3.4362;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,120,4257	0/0:16,0:16:48.14:0,48,1626	0/0:20,0:20:51.08:0,51,1995	0/0:26,0:26:69.16:0,69,2040	0/0:18,0:18:51.14:0,51,1669	0/0:19,0:19:57.20:0,57,2193	0/0:25,0:25:75.24:0,75,2662	0/0:18,0:18:54.18:0,54,1920	0/0:33,0:33:99:0,99,3579	0/0:24,0:24:69.21:0,69,2144	0/0:7,0:7:21.07:0,21,832	0/0:29,0:29:87.29:0,87,3280	0/0:16,0:16:47.73:0,48,1496	0/0:25,0:25:75.26:0,75,2929	0/0:32,0:32:96.33:0,96,3458	1/1:8,9:17:48.16:1953,48,0	0/0:32,0:32:96.28:0,96,3548	0/0:17,0:17:51.18:0,51,1951	0/0:31,0:31:90.03:0,90,2774	0/0:25,0:25:72.23:0,72,2605	0/0:35,0:35:99:0,105,3561	0/0:21,0:21:63.19:0,63,2163	0/0:12,0:12:33.11:0,33,1206	0/0:41,0:41:99:0,120,4401	0/0:20,0:20:60.20:0,60,2260	0/0:23,0:23:69.22:0,69,2445	0/0:18,0:18:54.19:0,54,2068	0/0:9,0:9:27.09:0,27,717
chr10	49668256	.	C	CTTACTG	1602.32	PASS	AB=0.757;AC=1;AF=0.018;AN=56;BaseQRankSum=7.416;DP=666;FS=0.855;HRun=0;HaplotypeScore=147.9869;InbreedingCoeff=-0.0184;MQ=88.10;MQ0=0;MQRankSum=-7.152;QD=57.23;ReadPosRankSum=0.809;VQSLOD=3.6042;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,120,2898	0/0:15,0:15:45.15:0,45,1116	0/0:22,0:22:60.18:0,60,1395	0/0:26,0:26:75.21:0,75,1650	0/0:18,0:18:45.14:0,45,1101	0/0:20,0:20:60.19:0,60,1484	0/0:26,0:26:75.24:0,75,1851	0/0:18,0:18:54.19:0,54,1347	0/0:31,0:31:93.32:0,93,2355	0/0:23,0:23:66.23:0,66,1610	0/0:7,0:7:21.07:0,21,538	0/0:30,0:30:87.30:0,87,2199	0/0:16,0:16:48.14:0,48,1086	0/0:27,0:27:75.26:0,75,1921	0/0:33,0:33:96.33:0,96,2457	0/1:19,9:28:99:1677,0,210	0/0:32,0:32:96.33:0,96,2390	0/0:18,0:18:54.15:0,54,1328	0/0:32,0:32:84.27:0,84,2032	0/0:25,0:25:75.24:0,75,1829	0/0:35,0:35:99:0,102,2461	0/0:21,0:21:60.21:0,60,1479	0/0:12,0:12:36.07:0,36,865	0/0:43,0:43:99:0,123,3077	0/0:19,0:19:57.20:0,57,1461	0/0:22,0:22:63.22:0,63,1586	0/0:18,0:18:54.19:0,54,1383	0/0:9,0:9:27.09:0,27,566
chr10	49669311	.	T	TG	1142.08	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=8.174;DP=659;FS=3.361;HRun=4;HaplotypeScore=65.6710;InbreedingCoeff=0.9877;MQ=86.73;MQ0=0;MQRankSum=-1.414;QD=33.59;ReadPosRankSum=1.056;VQSLOD=4.3857;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,111,1259	0/0:9,0:9:27.06:0,27,296	0/0:22,0:22:39.24:0,39,534	0/0:28,0:25:68.76:0,69,751	0/0:31,0:31:84.24:0,84,953	0/0:21,0:21:53.86:0,54,592	0/0:13,0:13:39.11:0,39,442	0/0:24,0:24:54.15:0,54,612	0/0:25,0:25:72.19:0,72,805	0/0:22,0:22:60.17:0,60,680	0/0:19,0:19:51.14:0,51,578	0/0:13,0:13:39.11:0,39,442	0/0:20,0:20:57.16:0,57,647	0/0:15,0:15:42.12:0,42,476	0/0:18,0:18:51.14:0,51,578	1/1:2,32:34:62.28:1237,62,0	0/0:24,0:24:69.18:0,69,772	0/0:13,0:13:16.56:0,17,293	0/0:27,0:27:78.21:0,78,876	0/0:32,0:32:87.23:0,87,976	0/0:33,0:33:99:0,99,1123	0/0:30,0:30:87.25:0,87,987	0/0:19,0:19:54.15:0,54,612	0/0:16,0:15:45.03:0,45,472	0/0:19,0:19:57.16:0,57,647	0/0:32,0:32:93.26:0,93,1047	0/0:39,0:39:99:0,111,1259	0/0:21,0:21:60.17:0,60,680
chr10	49670777	.	CT	C	2196.87	PASS	AC=16;AF=0.308;AN=52;BaseQRankSum=8.292;DP=464;FS=12.161;HRun=1;HaplotypeScore=57.1901;InbreedingCoeff=0.8753;MQ=35.46;MQ0=149;MQRankSum=2.487;QD=19.27;ReadPosRankSum=0.605;VQSLOD=2.4415;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:27:60.20:0,60,926	0/0:12,0:10:30.10:0,30,477	0/0:9,0:1:2.98:0,3,22	0/0:9,0:2:3.01:0,3,36	1/1:5,9:12:9.42:109,9,0	0/0:9,0:8:15.05:0,15,229	0/0:33,0:17:48.11:0,48,707	0/0:13,0:6:12.03:0,12,152	0/0:28,0:23:60.20:0,60,947	1/1:3,13:13:39.08:460,39,0	1/1:0,4:4:2.97:20,3,0	0/0:18,0:9:27.09:0,27,430	0/0:22,0:15:33.11:0,33,526	1/1:3,14:14:39.60:506,40,0	0/0:15,0:9:27.09:0,27,430	./.	1/1:11,13:14:40.01:492,40,0	1/1:8,8:8:15.64:218,16,0	0/0:28,0:6:18.06:0,18,287	0/0:13,0:11:30.07:0,30,467	0/0:44,0:17:45.14:0,45,691	0/0:12,0:11:14.53:0,15,238	0/0:9,0:6:8.97:0,9,134	0/0:14,0:8:24.05:0,24,357	1/1:2,8:8:21.07:270,21,0	1/1:3,10:10:27:311,27,0	0/0:20,0:11:30.10:0,30,468	./.
chr10	49678156	.	TAAA	T	1173.82	PASS	AB=0.634;AC=15;AF=0.300;AN=50;BaseQRankSum=9.215;DP=210;FS=3.037;HRun=9;HaplotypeScore=49.3585;InbreedingCoeff=0.5490;MQ=46.27;MQ0=25;MQRankSum=-2.496;QD=16.77;ReadPosRankSum=1.755;VQSLOD=0.1048;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:18:26.60:0,27,695	0/0:2,0:1:3.01:0,3,63	./.	0/0:3,0:3:8.81:0,9,63	1/1:1,4:6:17.90:163,18,0	0/0:10,0:8:18.06:0,18,378	0/0:3,0:2:6.02:0,6,127	0/0:21,0:19:45.10:0,45,772	0/0:9,0:9:24.08:0,24,506	0/1:1,3:4:51.74:63,0,52	1/1:1,6:7:18:174,18,0	0/0:7,0:7:18.06:0,18,380	0/0:11,0:10:24.08:0,24,505	1/1:0,5:5:14.94:122,15,0	0/0:6,0:3:6.02:0,6,126	./.	1/1:3,10:11:29.96:271,30,0	1/1:4,3:6:11.01:70,11,0	0/0:7,0:6:18.05:0,18,344	0/0:10,0:9:27.05:0,27,528	0/0:2,0:1:3.01:0,3,63	0/0:1,0:1:3.01:0,3,63	./.	0/0:2,0:2:3.01:0,3,63	1/1:1,4:6:14.87:128,15,0	0/1:5,13:15:18.82:332,0,19	0/0:16,0:14:39.13:0,39,825	0/1:2,1:2:14.77:25,0,15
chr10	49678167	.	T	TA	4299.18	PASS	AB=0.600;AC=45;AF=0.865;AN=52;BaseQRankSum=-2.289;DP=229;FS=41.067;HRun=10;HaplotypeScore=34.7926;InbreedingCoeff=0.5205;MQ=57.75;MQ0=17;MQRankSum=1.191;QD=22.28;ReadPosRankSum=2.506;VQSLOD=2.8634;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:18:32.91:0,33,270	1/1:1,1:1:2.98:21,3,0	0/0:8,0:3:2.78:0,3,13	0/0:6,0:5:11.13:0,11,70	1/1:3,0:6:12.50:124,12,0	1/1:3,4:5:12.03:128,12,0	1/1:1,2:2:3.01:32,3,0	1/1:6,21:25:60.09:611,60,0	1/1:0,9:9:24.06:255,24,0	0/1:2,0:6:6.10:103,0,6	1/1:0,0:7:21.04:214,21,0	1/1:0,8:8:18.05:192,18,0	1/1:2,9:10:24.06:256,24,0	1/1:1,0:6:15.02:146,15,0	1/1:2,4:4:6.02:64,6,0	./.	1/1:5,0:13:36.04:351,36,0	1/1:0,0:6:11.82:105,12,0	1/1:1,11:11:30.08:319,30,0	1/1:1,7:8:18.18:219,18,0	1/1:1,4:4:3.01:32,3,0	1/1:0,2:2:6.01:61,6,0	./.	1/1:0,2:2:3.01:32,3,0	1/1:2,0:8:18.51:183,19,0	1/1:4,1:18:33.70:476,34,0	1/1:2,11:13:17.36:330,17,0	1/1:0,0:2:5.88:46,6,0
chr10	49678359	.	CTTTTATTT	C	3772.59	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=7.597;DP=296;FS=14.176;HRun=0;HaplotypeScore=79.2143;InbreedingCoeff=0.8306;MQ=76.42;MQ0=1;MQRankSum=-8.446;QD=41.01;ReadPosRankSum=2.978;VQSLOD=2.0716;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:87.30:0,87,3499	0/0:2,0:2:6.02:0,6,254	0/0:13,0:11:26.33:0,26,325	0/0:16,0:12:24.71:0,25,201	1/1:3,4:7:3:71,3,0	0/0:8,0:8:18.03:0,18,657	0/0:5,0:5:15.05:0,15,586	0/0:28,0:28:66.22:0,66,2419	0/0:8,0:8:15.05:0,15,589	1/1:1,9:10:26.99:483,27,0	1/1:1,5:6:15.05:390,15,0	0/0:6,0:6:15.05:0,15,625	0/0:8,0:8:21.07:0,21,823	1/1:1,10:11:27.09:702,27,0	0/0:9,0:9:18.06:0,18,650	0/0:10,0:10:24.08:0,24,815	1/1:6,9:15:9.03:234,9,0	1/1:1,5:6:9.03:234,9,0	0/0:21,0:21:42.14:0,42,1629	0/0:3,0:3:9.03:0,9,304	0/0:4,0:4:3.01:0,3,93	0/0:1,0:1:3.01:0,3,125	0/0:7,0:7:21.07:0,21,842	0/0:3,0:3:3.01:0,3,99	1/1:2,7:9:12.04:312,12,0	1/1:4,11:15:33.06:800,33,0	0/0:19,0:19:48.16:0,48,1984	1/1:4,9:13:21.06:547,21,0
chr10	49678687	.	C	CATTTATTT	6939.31	PASS	AC=46;AF=0.885;AN=52;BaseQRankSum=-3.787;DP=264;FS=2.358;HRun=0;HaplotypeScore=78.5749;InbreedingCoeff=0.4670;MQ=77.56;MQ0=0;MQRankSum=-0.050;QD=31.40;ReadPosRankSum=-0.572;VQSLOD=3.8661;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,0:9:9.03:286,9,0	1/1:3,0:4:3.01:105,3,0	0/0:15,0:14:6:0,6,101	0/0:8,0:8:3:0,3,28	1/1:6,0:6:11.91:201,12,0	1/1:1,15:17:39.13:1618,39,0	1/1:1,4:5:9.03:373,9,0	1/1:41,0:38:51.09:1358,51,0	1/1:3,0:3:2.94:18,3,0	1/1:10,0:10:14.97:230,15,0	1/1:6,0:6:5.98:108,6,0	1/1:4,2:6:9.03:373,9,0	1/1:8,0:8:6:139,6,0	./.	1/1:3,0:8:3.01:105,3,0	0/0:14,0:13:36.12:0,36,647	1/1:12,0:12:11.95:213,12,0	1/1:6,0:6:9:145,9,0	1/1:10,0:15:9.03:327,9,0	1/1:6,0:6:9.02:170,9,0	./.	1/1:1,0:1:3.01:40,3,0	1/1:3,6:9:12.04:410,12,0	1/1:6,0:6:3.01:46,3,0	1/1:6,0:6:11.92:138,12,0	1/1:18,0:18:17.92:267,18,0	1/1:3,0:8:3.01:105,3,0	1/1:11,0:11:14.86:165,15,0
chr10	49678701	.	TTTATTTA	T	1247.41	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=-0.641;DP=236;FS=0.000;HRun=0;HaplotypeScore=69.9940;InbreedingCoeff=-0.0142;MQ=56.75;MQ0=0;MQRankSum=-1.764;QD=17.57;ReadPosRankSum=-1.444;VQSLOD=2.1184;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:27.08:0,27,661	0/0:4,0:4:6.02:0,6,162	0/0:11,0:9:24.06:0,24,540	0/0:3,0:3:9.03:0,9,226	0/1:9,0:9:56.19:56,0,358	0/0:18,0:18:42.14:0,42,1379	0/0:5,0:5:12.04:0,12,336	0/0:40,0:37:99:0,99,2882	0/0:5,0:5:15.05:0,15,265	0/1:9,0:9:17.54:18,0,676	0/1:5,0:5:68.16:68,0,151	0/0:6,0:6:15.04:0,15,450	0/0:2,0:2:6.02:0,6,202	0/1:4,0:4:71.17:71,0,106	0/0:2,0:2:3.01:0,3,100	1/1:0,17:17:39.13:1006,39,0	0/1:9,0:9:58.88:59,0,451	0/1:6,0:6:64.67:65,0,293	0/0:7,0:7:21.07:0,21,570	0/0:7,0:7:21.07:0,21,568	0/0:5,0:5:3.01:0,3,48	0/0:1,0:1:3.01:0,3,108	0/0:9,0:9:24.08:0,24,566	0/0:5,0:5:12.04:0,12,252	0/0:7,0:7:20.96:0,21,526	0/0:14,0:14:36.11:0,36,876	0/0:3,0:3:6:0,6,124	0/1:12,0:12:47.88:48,0,559
chr10	49678708	.	A	AT	1376.28	PASS	AB=0.713;AC=18;AF=0.333;AN=54;BaseQRankSum=0.169;DP=229;FS=1.982;HRun=3;HaplotypeScore=46.2027;InbreedingCoeff=0.0267;MQ=61.97;MQ0=0;MQRankSum=-2.957;QD=11.10;ReadPosRankSum=2.978;VQSLOD=1.6349;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:13.98:0,14,203	1/1:1,0:1:1.55:4,2,0	0/0:10,0:9:18.03:0,18,203	0/0:5,0:5:9.03:0,9,108	0/1:2,7:9:23.84:262,0,24	0/1:19,0:19:16.48:16,0,77	0/1:4,0:4:3.35:3,0,28	0/0:34,0:31:78.15:0,78,915	0/0:6,0:6:18.05:0,18,213	0/1:6,2:8:65.80:66,0,100	0/1:3,6:9:1.37:149,0,1	0/0:5,0:5:3.91:0,4,68	0/0:5,0:5:14.06:0,14,138	1/1:1,6:7:12.04:164,12,0	0/0:4,0:4:6.89:0,7,103	1/1:18,0:17:3.77:6,4,0	0/1:3,5:8:50.61:185,0,51	0/1:3,4:7:43.34:104,0,43	0/0:5,0:5:6.41:0,6,67	0/0:7,0:7:20.98:0,21,209	./.	0/0:2,0:2:6.02:0,6,72	0/0:8,0:8:8.82:0,9,167	0/0:5,0:5:15.04:0,15,175	0/1:4,4:8:67.03:67,0,89	0/1:6,8:14:99:242,0,115	1/1:1,0:1:1.55:4,2,0	0/1:4,7:11:99:253,0,110
chr10	49679559	.	AT	A	71.30	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.087;DP=385;FS=0.000;HRun=6;HaplotypeScore=38.8347;InbreedingCoeff=0.7536;MQ=70.46;MQ0=0;MQRankSum=-2.082;QD=14.26;ReadPosRankSum=-0.194;VQSLOD=1.9001;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:33.09:0,33,417	0/0:12,0:12:36.08:0,36,441	0/0:11,0:9:16.80:0,17,155	0/0:9,0:7:5.88:0,6,54	0/0:18,0:18:51.13:0,51,620	0/0:21,0:21:63.17:0,63,786	0/0:6,0:6:15.04:0,15,183	0/0:26,0:26:75.22:0,75,950	0/0:7,0:7:21.05:0,21,261	0/0:22,0:22:66.21:0,66,856	0/0:22,0:22:60.18:0,60,775	0/0:9,0:9:24.06:0,24,301	0/0:10,0:10:27.09:0,27,354	0/0:11,0:11:33.05:0,33,400	0/0:11,0:11:33.11:0,33,434	1/1:1,4:5:15.04:160,15,0	0/0:9,0:9:27.07:0,27,340	0/0:12,0:12:27.09:0,27,355	0/0:22,0:22:60.19:0,60,779	0/0:27,0:27:78.22:0,78,985	0/0:4,0:4:12.04:0,12,158	0/0:6,0:6:15.04:0,15,183	0/0:11,0:11:30.09:0,30,382	0/0:2,0:2:6.02:0,6,79	0/0:21,0:21:60.17:0,60,760	0/0:11,0:11:33.10:0,33,422	0/0:32,0:32:93.24:0,93,1151	0/0:17,0:17:45.12:0,45,578
chr10	49679583	.	A	AC	257.36	PASS	AC=2;AF=0.037;AN=54;BaseQRankSum=5.126;DP=399;FS=5.087;HRun=3;HaplotypeScore=40.4676;InbreedingCoeff=0.8791;MQ=66.97;MQ0=0;MQRankSum=-5.111;QD=28.60;ReadPosRankSum=-0.179;VQSLOD=2.4811;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:33.08:0,33,384	0/0:9,0:9:27.06:0,27,311	0/0:7,0:7:18.05:0,18,198	./.	0/0:18,0:18:51.16:0,51,611	0/0:20,0:20:57.16:0,57,665	0/0:3,0:3:9.03:0,9,108	0/0:24,0:24:66.16:0,66,749	0/0:9,0:9:27.06:0,27,301	0/0:23,0:23:69.20:0,69,818	0/0:21,0:21:63.19:0,63,756	0/0:9,0:9:27.07:0,27,311	0/0:10,0:10:30.09:0,30,360	0/0:13,0:13:36.10:0,36,420	0/0:13,0:13:39.12:0,39,467	1/1:0,9:9:27.02:351,27,0	0/0:8,0:8:24.06:0,24,276	0/0:13,0:13:36.11:0,36,432	0/0:22,0:22:54.10:0,54,608	0/0:36,0:36:99:0,108,1252	0/0:7,0:7:21.06:0,21,252	0/0:10,0:10:27.06:0,27,311	0/0:15,0:15:45.14:0,45,539	0/0:3,0:3:9.03:0,9,108	0/0:18,0:18:54.15:0,54,627	0/0:13,0:13:39.12:0,39,468	0/0:33,0:33:99:0,99,1151	0/0:18,0:18:48.07:0,48,525
chr10	49679590	.	A	ATTATTTTCTT	1822.54	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.165;DP=400;FS=0.000;HRun=0;HaplotypeScore=116.9030;InbreedingCoeff=0.8378;MQ=70.22;MQ0=0;MQRankSum=-6.236;QD=140.20;ReadPosRankSum=-0.410;VQSLOD=4.7193;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:33.11:0,33,1049	0/0:8,0:8:24.08:0,24,767	0/0:8,0:8:21.06:0,21,550	0/0:3,0:3:9.03:0,9,215	0/0:22,0:22:60.15:0,60,1681	0/0:18,0:18:51.13:0,51,1304	0/0:4,0:4:9.03:0,9,238	0/0:21,0:21:45.15:0,45,1143	0/0:9,0:9:27.09:0,27,863	0/0:22,0:22:60.21:0,60,1914	0/0:21,0:21:57.16:0,57,1632	0/0:10,0:10:27.09:0,27,742	0/0:10,0:10:27.09:0,27,841	0/0:13,0:13:36.09:0,36,993	0/0:15,0:15:45.15:0,45,1386	1/1:6,7:13:39.13:1917,39,0	0/0:7,0:7:21.06:0,21,600	0/0:14,0:14:26.85:0,27,926	0/0:20,0:20:51.15:0,51,1467	0/0:37,0:37:99:0,102,2946	0/0:9,0:9:24.07:0,24,658	0/0:10,0:10:30.09:0,30,843	0/0:15,0:15:36.12:0,36,1150	0/0:3,0:3:9.03:0,9,288	0/0:16,0:16:48.16:0,48,1534	0/0:16,0:16:42.14:0,42,1206	0/0:31,0:31:81.24:0,81,2440	0/0:14,0:14:30.10:0,30,910
chr10	49680615	.	GA	G	648.46	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.014;DP=600;FS=9.396;HRun=3;HaplotypeScore=66.3615;InbreedingCoeff=0.9945;MQ=80.01;MQ0=0;MQRankSum=-3.109;QD=32.42;ReadPosRankSum=0.488;VQSLOD=3.4430;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,111,1555	0/0:10,0:10:27.08:0,27,373	0/0:19,0:19:33.49:0,33,550	0/0:11,0:11:23.66:0,24,278	0/0:29,0:29:84.27:0,84,1190	0/0:22,0:22:66.21:0,66,932	0/0:22,0:22:63.17:0,63,848	0/0:36,0:36:99:0,108,1507	0/0:16,0:16:48.16:0,48,691	0/0:14,0:14:39.13:0,39,562	0/0:23,0:23:69.22:0,69,974	0/0:9,0:9:27.09:0,27,389	0/0:15,0:15:42.14:0,42,605	0/0:19,0:19:54.17:0,54,753	0/0:21,0:21:60.19:0,60,847	1/1:0,20:20:60.19:743,60,0	0/0:31,0:31:87.28:0,87,1234	0/0:21,0:21:60.20:0,60,864	0/0:17,0:17:51.17:0,51,732	0/0:43,0:43:99:0,120,1672	0/0:17,0:17:51.15:0,51,714	0/0:23,0:23:63.18:0,63,870	0/0:19,0:19:54.18:0,54,772	0/0:17,0:17:51.13:0,51,695	0/0:19,0:19:51.16:0,51,716	0/0:22,0:22:66.20:0,66,917	0/0:38,0:38:99:0,111,1598	0/0:10,0:10:27.56:0,28,388
chr10	49681267	.	C	CTAAAAG	912.71	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-1.980;DP=711;FS=2.967;HRun=0;HaplotypeScore=144.2215;InbreedingCoeff=0.9989;MQ=93.99;MQ0=0;MQRankSum=-5.149;QD=57.04;ReadPosRankSum=0.837;VQSLOD=3.6381;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,120,2964	0/0:15,0:15:45.15:0,45,1153	0/0:38,0:38:99:0,111,2401	0/0:30,0:30:90.24:0,90,1994	0/0:17,0:17:51.16:0,51,1224	0/0:18,0:18:54.15:0,54,1250	0/0:32,0:32:93.27:0,93,2193	0/0:25,0:25:75.22:0,75,1621	0/0:17,0:17:48.15:0,48,1176	0/0:32,0:32:96.30:0,96,2231	0/0:17,0:17:51.15:0,51,1147	0/0:25,0:25:69.22:0,69,1711	0/0:19,0:19:54.17:0,54,1315	0/0:24,0:24:72.23:0,72,1785	0/0:29,0:29:87.24:0,87,1992	1/1:0,12:16:27.09:1007,27,0	0/0:28,0:28:84.26:0,84,2095	0/0:14,0:14:39.06:0,39,887	0/0:23,0:23:69.22:0,69,1687	0/0:23,0:23:69.21:0,69,1657	0/0:60,0:60:99:0,181,4355	0/0:24,0:24:66.22:0,66,1690	0/0:18,0:18:54.03:0,54,1212	0/0:35,0:35:99:0,99,2370	0/0:17,0:17:48.15:0,48,1178	0/0:33,0:33:93.30:0,93,2234	0/0:27,0:27:78.25:0,78,1907	0/0:15,0:15:45.15:0,45,1152
chr10	49681852	.	A	AC	899.58	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.731;DP=620;FS=2.904;HRun=0;HaplotypeScore=61.8851;InbreedingCoeff=0.8501;MQ=70.79;MQ0=0;MQRankSum=-0.692;QD=40.89;ReadPosRankSum=-0.625;VQSLOD=3.9507;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,117,1514	0/0:11,0:11:33.11:0,33,461	0/0:10,0:10:28.73:0,29,295	0/0:7,0:7:3.01:0,3,42	0/0:36,0:36:99:0,108,1476	0/0:21,0:21:63.19:0,63,862	0/0:17,0:17:51.13:0,51,675	0/0:36,0:36:99:0,108,1433	0/0:16,0:16:42.13:0,42,572	0/0:27,0:27:81.25:0,81,1077	0/0:25,0:25:75.24:0,75,1032	0/0:14,0:14:36.12:0,36,503	0/0:15,0:15:45.13:0,45,611	0/0:20,0:20:57.12:0,57,739	0/0:15,0:15:45.15:0,45,627	1/1:0,22:22:63.21:994,63,0	0/0:20,0:20:60.15:0,60,794	0/0:21,0:21:63.21:0,63,879	0/0:15,0:15:45.15:0,45,629	0/0:25,0:25:75.25:0,75,1048	0/0:18,0:18:54.18:0,54,754	0/0:19,0:19:57.18:0,57,782	0/0:31,0:31:90.28:0,90,1236	0/0:21,0:21:63.20:0,63,863	0/0:22,0:22:66.21:0,66,908	0/0:41,0:41:99:0,123,1703	0/0:37,0:37:99:0,108,1357	0/0:17,0:17:51.09:0,51,653
chr10	49682338	.	C	CT	10981.78	PASS	AB=1.000;AC=51;AF=0.911;AN=56;BaseQRankSum=-8.107;DP=533;FS=5.651;HRun=10;HaplotypeScore=54.8719;InbreedingCoeff=0.5964;MQ=67.09;MQ0=0;MQRankSum=-1.707;QD=21.37;ReadPosRankSum=0.018;VQSLOD=5.7363;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,20:25:26.48:487,26,0	1/1:0,8:8:24.06:256,24,0	0/0:3,0:3:8.53:0,9,50	0/1:8,0:9:14.04:14,0,38	1/1:5,23:29:74.94:757,75,0	1/1:4,25:30:74.96:768,75,0	1/1:1,10:11:2.38:219,2,0	1/1:11,20:31:60.09:612,60,0	1/1:2,9:11:21.05:224,21,0	1/1:3,24:27:72.15:752,72,0	1/1:1,14:15:33.08:352,33,0	1/1:1,9:11:17.22:218,17,0	1/1:5,14:19:5.43:263,5,0	1/1:3,10:13:6.32:264,6,0	1/1:5,18:24:32.33:534,32,0	0/0:16,0:16:41.93:0,42,342	1/1:1,17:18:42.11:448,42,0	1/1:4,5:9:9.02:96,9,0	1/1:6,19:25:54.12:568,54,0	1/1:8,21:30:31.37:505,31,0	1/1:2,22:24:32.50:551,32,0	1/1:1,15:16:37.91:389,38,0	1/1:4,13:17:27.53:282,28,0	1/1:0,12:12:23.98:241,24,0	1/1:3,17:19:27.24:459,27,0	1/1:7,14:21:42.11:448,42,0	1/1:8,28:36:34.92:782,35,0	1/1:6,17:23:7.86:495,8,0
chr10	49682850	.	TA	T	275.84	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.965;DP=544;FS=0.853;HRun=10;HaplotypeScore=55.3408;InbreedingCoeff=0.8718;MQ=67.34;MQ0=1;MQRankSum=-0.431;QD=16.23;ReadPosRankSum=0.874;VQSLOD=3.8653;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,2:22:8.06:0,8,534	0/0:4,0:4:12.03:0,12,133	0/0:10,0:9:15.85:0,16,127	0/0:9,0:9:14.39:0,14,120	0/0:25,2:27:25.46:0,25,719	0/0:18,0:17:42.11:0,42,457	0/0:21,0:23:65.84:0,66,692	0/0:35,0:35:84.23:0,84,929	0/0:16,0:16:42.11:0,42,458	0/0:30,0:30:84.22:0,84,920	0/0:25,0:25:66.18:0,66,728	0/0:16,1:17:22.04:0,22,448	0/0:17,0:17:51.12:0,51,555	0/0:16,0:16:42.08:0,42,452	0/0:18,0:18:48.13:0,48,531	1/1:16,1:17:44.72:371,45,0	0/0:26,0:26:66.16:0,66,721	0/0:14,0:14:39.06:0,39,418	0/0:14,0:14:42.10:0,42,451	0/0:25,0:25:62.93:0,63,655	0/0:14,0:14:30.08:0,30,332	0/0:21,0:21:57.15:0,57,631	0/0:29,0:29:72.17:0,72,781	0/0:17,0:17:45.11:0,45,489	0/0:19,0:19:54.13:0,54,584	0/0:26,0:26:72.19:0,72,790	0/0:29,0:29:81.22:0,81,894	0/0:6,0:6:18.05:0,18,199
chr10	49683904	.	CT	C	75.73	PASS	AB=0.556;AC=1;AF=0.018;AN=56;BaseQRankSum=4.842;DP=578;FS=21.224;HRun=1;HaplotypeScore=57.7506;InbreedingCoeff=-0.0188;MQ=77.28;MQ0=0;MQRankSum=-4.715;QD=7.57;ReadPosRankSum=1.397;VQSLOD=-0.7127;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:75.26:0,75,1198	0/0:5,0:5:15.05:0,15,240	0/0:23,0:24:66.15:0,66,999	0/0:10,0:10:27.04:0,27,401	0/0:31,0:31:93.30:0,93,1464	0/0:27,0:27:81.28:0,81,1291	0/0:20,0:20:60.19:0,60,935	0/0:27,0:27:81.27:0,81,1275	0/0:20,0:20:60.19:0,60,935	0/0:21,0:21:60.20:0,60,957	0/0:31,0:31:93.32:0,93,1486	0/0:12,0:12:36.12:0,36,576	0/0:24,0:24:72.25:0,72,1151	0/0:22,0:22:66.23:0,66,1055	0/0:27,0:27:81.28:0,81,1293	0/1:2,8:10:66.19:150,0,66	0/0:23,0:23:69.16:0,69,1049	0/0:13,0:13:39.09:0,39,595	0/0:18,0:18:54.18:0,54,842	0/0:31,0:31:93.30:0,93,1458	0/0:15,0:15:45.15:0,45,720	0/0:25,0:25:75.24:0,75,1177	0/0:20,0:20:57.18:0,57,882	0/0:15,0:15:42.14:0,42,671	0/0:23,0:23:69.24:0,69,1103	0/0:26,0:26:78.23:0,78,1182	0/0:16,0:16:48.16:0,48,759	0/0:16,0:16:48.16:0,48,767
chr10	49683907	.	CAACATTAG	C	464.86	PASS	AB=0.556;AC=1;AF=0.018;AN=56;BaseQRankSum=4.947;DP=589;FS=24.326;HRun=0;HaplotypeScore=144.6637;InbreedingCoeff=-0.0280;MQ=77.52;MQ0=0;MQRankSum=-3.953;QD=46.49;ReadPosRankSum=1.163;VQSLOD=1.7560;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:87.23:0,87,3459	0/0:5,0:5:15.05:0,15,695	0/0:21,0:22:48.16:0,48,1515	0/0:10,0:11:0.13:0,0,406	0/0:30,0:30:90.30:0,90,4032	0/0:28,0:28:84.27:0,84,3689	0/0:20,0:20:60.21:0,60,2566	0/0:29,0:29:87.29:0,87,3622	0/0:21,0:21:63.22:0,63,2826	0/0:22,0:22:66.23:0,66,2984	0/0:33,0:33:99:0,99,4395	0/0:12,0:12:36.12:0,36,1667	0/0:24,0:24:72.25:0,72,3297	0/0:23,0:23:69.24:0,69,3049	0/0:27,0:27:81.28:0,81,3697	0/1:2,8:10:99:539,0,248	0/0:23,0:23:66.23:0,66,3014	0/0:13,0:13:39.13:0,39,1699	0/0:16,0:16:48.16:0,48,2210	0/0:29,0:29:87.28:0,87,3730	0/0:18,0:18:54.19:0,54,2388	0/0:26,0:26:78.27:0,78,3467	0/0:21,0:21:63.22:0,63,2756	0/0:15,0:15:42.14:0,42,1830	0/0:23,0:23:69.23:0,69,2921	0/0:27,0:27:81.27:0,81,3356	0/0:16,0:16:48.12:0,48,1946	0/0:16,0:16:48.16:0,48,2082
chr10	49684683	.	GA	G	310.86	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.848;DP=474;FS=2.113;HRun=8;HaplotypeScore=47.1827;InbreedingCoeff=0.8812;MQ=85.64;MQ0=0;MQRankSum=-1.372;QD=20.72;ReadPosRankSum=0.907;VQSLOD=3.4859;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:93.27:0,93,1112	0/0:6,0:6:18.06:0,18,217	0/0:16,0:16:40.81:0,41,434	0/0:16,0:15:33.05:0,33,367	0/0:21,0:21:60.18:0,60,725	0/0:20,1:21:19.17:0,19,515	0/0:23,0:23:61.43:0,61,728	0/0:31,0:31:81.23:0,81,959	0/0:13,0:13:36.11:0,36,435	0/0:17,0:17:36.11:0,36,435	0/0:23,0:23:60.18:0,60,723	0/0:14,0:14:42.13:0,42,507	0/0:26,0:26:75.23:0,75,906	0/0:14,0:14:30.09:0,30,362	0/0:11,0:11:30.09:0,30,362	1/1:0,15:15:42.07:406,42,0	0/0:13,0:13:39.12:0,39,471	0/0:9,0:9:27.06:0,27,313	0/0:16,1:17:16.13:0,16,455	0/0:18,0:18:51.16:0,51,616	0/0:17,0:17:51.16:0,51,615	0/0:4,0:4:6.02:0,6,72	0/0:18,0:18:51.14:0,51,603	0/0:15,0:15:45.14:0,45,544	0/0:22,0:22:63.19:0,63,761	0/0:13,0:13:36.09:0,36,422	0/0:18,0:18:51.16:0,51,616	0/0:12,0:12:33.10:0,33,399
chr10	49684834	.	C	CA	530.53	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-5.899;DP=491;FS=5.724;HRun=10;HaplotypeScore=49.9950;InbreedingCoeff=0.7404;MQ=67.62;MQ0=1;MQRankSum=-2.715;QD=18.29;ReadPosRankSum=0.790;VQSLOD=4.2795;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,24:29:60.07:625,60,0	0/0:4,0:4:11.97:0,12,96	0/0:13,0:13:2.10:0,2,121	0/0:13,0:13:22.92:0,23,168	0/0:29,0:29:74.90:0,75,616	0/0:22,0:22:56.91:0,57,468	0/0:12,0:12:29.95:0,30,246	0/0:18,0:18:44.90:0,45,365	0/0:13,0:14:40.98:0,41,323	0/0:29,0:30:70.91:0,71,569	0/0:22,0:22:62.92:0,63,517	0/0:13,0:13:35.94:0,36,296	0/0:24,0:24:59.91:0,60,492	0/0:15,0:15:38.91:0,39,315	0/0:16,0:16:32.93:0,33,271	0/0:12,0:12:32.95:0,33,271	0/0:16,0:16:44.94:0,45,369	0/0:15,0:16:34.99:0,35,277	0/0:12,0:12:26.95:0,27,221	0/0:32,0:32:56.59:0,57,607	0/0:16,0:16:41.95:0,42,345	0/0:11,0:11:23.94:0,24,194	0/0:18,0:18:44.93:0,45,369	0/0:13,0:13:38.96:0,39,320	0/0:14,0:14:38.93:0,39,317	0/0:24,0:24:50.92:0,51,417	0/0:27,0:27:71.92:0,72,591	0/0:5,0:5:5.98:0,6,49
chr10	49684982	.	C	CA	10575.78	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=2.089;DP=471;FS=0.820;HRun=6;HaplotypeScore=57.6007;InbreedingCoeff=0.9814;MQ=82.12;MQ0=0;MQRankSum=-3.566;QD=32.34;ReadPosRankSum=3.504;VQSLOD=4.9889;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:51.12:0,51,520	1/1:2,8:10:24.08:302,24,0	0/0:11,0:11:9.75:0,10,237	0/0:14,0:14:39.09:0,39,397	1/1:7,16:23:51.15:629,51,0	1/1:2,19:20:57.18:717,57,0	1/1:2,14:16:42.13:528,42,0	0/0:18,0:18:51.11:0,51,520	1/1:1,9:10:24.08:302,24,0	1/1:0,27:27:81.26:1018,81,0	1/1:1,15:16:45.14:566,45,0	1/1:2,9:11:21.07:264,21,0	1/1:0,18:18:51.16:642,51,0	1/1:1,14:15:42.07:509,42,0	1/1:1,23:24:63.20:793,63,0	0/0:11,0:11:33.08:0,33,337	1/1:2,18:20:48.15:604,48,0	1/1:2,3:5:9.03:113,9,0	0/0:17,0:17:39.04:0,39,383	0/0:19,0:19:54.07:0,54,533	0/0:10,0:10:27.06:0,27,275	1/1:2,13:15:33.11:415,33,0	1/1:0,22:22:63.20:792,63,0	1/1:0,11:11:30.10:377,30,0	1/1:2,18:20:48.15:604,48,0	1/1:3,25:28:75.22:929,75,0	0/0:24,0:24:60.13:0,60,612	1/1:2,13:15:39.09:472,39,0
chr10	49685076	.	CCG	C	6161.85	PASS	AB=1.000;AC=38;AF=0.679;AN=56;BaseQRankSum=-11.524;DP=475;FS=2.228;HRun=0;HaplotypeScore=102.9668;InbreedingCoeff=0.8287;MQ=82.47;MQ0=0;MQRankSum=-1.134;QD=18.56;ReadPosRankSum=-1.382;VQSLOD=4.8498;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,11:14:33.11:502,33,0	1/1:3,1:4:10.08:82,10,0	0/0:12,0:11:13.24:0,13,410	0/1:15,0:14:7.35:7,0,356	1/1:24,0:24:36.28:113,36,0	0/0:26,1:26:41.75:0,42,489	0/0:17,0:17:15.17:0,15,298	1/1:2,29:31:87.21:1233,87,0	0/0:20,0:20:23.83:0,24,314	1/1:18,0:18:35.85:135,36,0	1/1:22,0:22:43.03:119,43,0	0/1:11,0:11:28.27:28,0,139	0/0:18,0:18:50.75:0,51,395	1/1:18,0:18:28.70:80,29,0	1/1:18,0:18:32.49:127,32,0	1/1:11,0:11:20.84:58,21,0	1/1:16,0:16:32.37:90,32,0	1/1:8,1:9:19.09:90,19,0	1/1:2,16:18:52.51:661,53,0	1/1:7,22:29:75.11:1066,75,0	1/1:0,12:12:33.11:505,33,0	0/0:20,0:20:14.07:0,14,369	0/0:12,0:12:35.87:0,36,307	0/0:17,0:17:47.76:0,48,366	1/1:11,0:11:18.11:50,18,0	1/1:15,0:15:23.57:82,24,0	1/1:0,26:26:69.23:1056,69,0	1/1:10,0:10:20.18:78,20,0
chr10	49685077	.	CG	C	8681.72	PASS	AB=0.993;AC=41;AF=0.732;AN=56;BaseQRankSum=-13.122;DP=477;FS=3.943;HRun=1;HaplotypeScore=84.8867;InbreedingCoeff=0.5024;MQ=83.16;MQ0=0;MQRankSum=-0.982;QD=21.87;ReadPosRankSum=-2.221;VQSLOD=4.3425;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,3:14:32.26:196,32,0	1/1:3,2:5:14.94:150,15,0	0/0:13,0:12:1.34:0,1,357	0/1:15,0:14:7.19:7,0,271	1/1:0,24:24:60.07:769,60,0	0/1:26,1:26:51.59:52,0,131	0/1:17,0:17:33.78:34,0,81	1/1:29,1:30:85.17:524,85,0	0/1:21,0:21:6.60:7,0,76	1/1:7,12:19:54.15:704,54,0	1/1:5,17:22:66.21:905,66,0	0/1:11,0:11:45.87:90,0,46	0/0:18,0:18:39.27:0,39,146	1/1:0,18:18:42.14:586,42,0	1/1:5,13:18:48.14:625,48,0	1/1:0,11:11:33.11:456,33,0	1/1:1,15:16:48.16:670,48,0	1/1:1,8:9:27:351,27,0	1/1:16,2:18:51.52:318,52,0	1/1:22,7:29:73.35:443,73,0	1/1:12,0:12:32.17:186,32,0	0/0:20,0:20:4.36:0,4,108	0/0:12,0:12:30.62:0,31,137	0/0:17,0:17:35.81:0,36,129	1/1:5,6:11:27.09:376,27,0	1/1:6,8:14:42.10:511,42,0	1/1:26,0:26:67.26:390,67,0	1/1:0,10:10:26.99:332,27,0
chr10	49696777	.	TAGCA	T	15758.51	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=18.771;DP=642;FS=2.955;HRun=0;HaplotypeScore=137.8935;InbreedingCoeff=0.9978;MQ=89.37;MQ0=0;MQRankSum=-5.288;QD=47.18;ReadPosRankSum=2.348;VQSLOD=5.2514;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,144,3895	0/0:14,0:14:42.14:0,42,1175	0/0:30,0:30:84.08:0,84,2172	0/0:24,0:23:66.18:0,66,1576	1/1:2,31:33:82.03:1456,82,0	0/0:24,0:24:69.24:0,69,1930	0/0:14,0:14:42.14:0,42,1135	1/1:3,26:29:76.10:1377,76,0	0/0:28,0:28:84.29:0,84,2327	1/1:5,24:29:76.49:1444,76,0	1/1:3,20:23:48.16:899,48,0	0/0:12,0:12:36.12:0,36,950	0/0:22,0:22:66.23:0,66,1798	1/1:3,16:19:46.28:888,46,0	0/0:18,0:18:54.19:0,54,1475	0/0:18,0:18:54.19:0,54,1511	1/1:1,28:29:72.25:1409,72,0	1/1:2,7:9:18.95:356,19,0	1/1:2,20:22:60.16:1114,60,0	1/1:2,35:37:99:1983,102,0	1/1:1,25:26:57.20:1122,57,0	0/0:28,0:28:84.29:0,84,2317	0/0:21,0:21:63.22:0,63,1741	0/0:6,0:6:18.06:0,18,504	1/1:0,24:24:60.16:1140,60,0	1/1:2,16:18:48.16:922,48,0	1/1:1,23:24:57.18:1117,57,0	1/1:1,11:12:27.09:532,27,0
chr10	49699051	.	CATAGGCT	C	16610.07	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=19.059;DP=599;FS=1.020;HRun=0;HaplotypeScore=157.5855;InbreedingCoeff=0.9832;MQ=82.89;MQ0=0;MQRankSum=-16.786;QD=58.49;ReadPosRankSum=0.251;VQSLOD=4.9792;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:96.31:0,96,3686	0/0:6,0:6:18.06:0,18,727	0/0:25,0:25:63.22:0,63,2435	0/0:23,0:23:42.73:0,43,2338	1/1:0,22:22:53.78:1414,54,0	0/0:22,0:22:63.22:0,63,2540	0/0:19,0:19:57.18:0,57,2046	1/1:1,25:26:75.20:1812,75,0	0/0:24,0:24:72.25:0,72,2652	1/1:3,24:27:63.11:1339,63,0	1/1:2,21:23:51.18:1274,51,0	0/0:20,0:20:57.20:0,57,2209	0/0:19,0:19:51.17:0,51,2044	1/1:4,21:25:60.21:1581,60,0	0/0:31,0:31:93.32:0,93,3756	0/0:32,0:32:90.31:0,90,3544	1/1:3,20:23:48.16:1265,48,0	1/1:1,8:9:18.06:474,18,0	1/1:2,18:20:48.16:1199,48,0	1/1:0,26:26:60.21:1570,60,0	1/1:3,11:14:24.08:622,24,0	0/0:21,0:21:60.18:0,60,2226	0/0:22,0:22:66.23:0,66,2558	0/0:18,0:18:54.19:0,54,2106	1/1:5,15:20:39.13:1015,39,0	1/1:2,22:24:63.18:1468,63,0	1/1:3,20:23:54.19:1419,54,0	1/1:0,2:2:6.02:158,6,0
chr10	49699203	.	AG	A	1167.10	PASS	AB=0.985;AC=18;AF=0.321;AN=56;BaseQRankSum=20.127;DP=663;FS=2.187;HRun=3;HaplotypeScore=130.4047;InbreedingCoeff=0.1980;MQ=80.35;MQ0=0;MQRankSum=-6.026;QD=3.58;ReadPosRankSum=1.879;VQSLOD=0.5099;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:96.17:0,96,1253	0/0:6,0:6:15.05:0,15,214	0/0:25,0:25:69.19:0,69,918	0/0:23,0:23:50.32:0,50,728	0/1:15,0:15:32.61:33,0,34	0/0:17,0:17:48.11:0,48,637	0/0:23,0:23:66.22:0,66,949	0/1:33,0:33:35.03:126,0,35	0/0:23,0:23:69.20:0,69,953	0/1:26,0:26:69.71:70,0,70	0/1:12,0:12:3.16:50,0,3	0/0:36,0:36:99:0,102,1464	0/0:27,0:27:81.24:0,81,1106	1/1:38,0:38:18.95:139,19,0	0/0:36,0:36:99:0,108,1530	0/0:31,0:31:93.31:0,93,1333	1/1:21,0:21:13.32:83,13,0	0/1:16,0:16:27.60:52,0,28	0/1:16,0:16:46.21:46,0,68	0/1:22,1:23:25.11:67,0,25	0/1:41,2:43:32.51:176,0,33	0/0:11,0:11:23.91:0,24,259	0/0:20,0:20:56.88:0,57,724	0/0:25,0:25:75.25:0,75,1078	0/1:13,1:14:41.99:120,0,42	0/1:29,0:29:20.87:123,0,21	1/1:36,0:36:32.70:231,33,0	1/1:4,0:4:9.34:33,9,0
chr10	49699206	.	GA	G	7691.35	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=18.987;DP=678;FS=10.233;HRun=7;HaplotypeScore=114.0919;InbreedingCoeff=0.9918;MQ=80.54;MQ0=0;MQRankSum=-6.661;QD=23.81;ReadPosRankSum=1.373;VQSLOD=3.8473;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,111,1274	0/0:6,0:6:18.05:0,18,215	0/0:26,0:26:72.09:0,72,813	0/0:23,0:23:48.13:0,48,574	1/1:5,11:16:14.48:266,14,0	0/0:20,0:20:45.10:0,45,537	0/0:22,0:22:66.21:0,66,830	1/1:4,28:32:81.16:825,81,0	0/0:24,0:24:69.20:0,69,843	1/1:3,22:25:63.14:642,63,0	1/1:1,11:12:27.06:275,27,0	0/0:34,0:34:99:0,102,1283	0/0:27,0:28:81.07:0,81,982	1/1:2,33:35:90.12:894,90,0	0/0:39,0:39:99:0,114,1378	0/0:32,0:32:96.30:0,96,1197	1/1:1,19:20:51.10:520,51,0	1/1:3,13:16:39.08:397,39,0	1/1:3,12:15:33.04:326,33,0	1/1:5,19:24:48.09:489,48,0	1/1:6,36:42:87.18:879,87,0	0/0:12,0:12:30.06:0,30,337	0/0:23,0:23:63.16:0,63,741	0/0:25,0:25:75.24:0,75,944	1/1:4,10:14:27.04:267,27,0	1/1:5,27:32:78.11:782,78,0	1/1:2,34:36:99:1008,99,0	1/1:0,4:4:12.03:122,12,0
chr10	49700177	.	T	TTATA	16984.71	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=0.489;DP=543;FS=5.300;HRun=0;HaplotypeScore=96.8691;InbreedingCoeff=0.9872;MQ=60.99;MQ0=0;MQRankSum=-4.806;QD=56.62;ReadPosRankSum=-0.942;VQSLOD=6.0379;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:75.20:0,75,1273	0/0:8,0:8:21.06:0,21,345	0/0:8,0:6:12.34:0,12,161	0/0:7,0:6:11.91:0,12,156	1/1:1,20:21:54.19:1377,54,0	0/0:21,0:21:51.17:0,51,875	0/0:6,0:6:15.05:0,15,267	1/1:15,23:39:78.23:1752,78,0	0/0:15,0:15:45.10:0,45,735	1/1:4,21:25:66.23:1645,66,0	1/1:5,16:23:57.19:1352,57,0	0/0:15,0:14:39.13:0,39,686	0/0:25,0:25:66.23:0,66,1175	1/1:3,14:17:30.10:759,30,0	0/0:17,0:17:39.13:0,39,694	0/0:26,0:26:78.21:0,78,1301	1/1:1,13:14:33.11:848,33,0	1/1:5,9:15:18.06:464,18,0	1/1:3,12:15:40.02:962,40,0	1/1:5,28:35:90.31:2228,90,0	1/1:1,10:11:21.07:542,21,0	0/0:24,0:24:69.21:0,69,1143	0/0:25,0:25:69.23:0,69,1197	0/0:19,0:19:51.17:0,51,908	1/1:5,19:25:60.21:1517,60,0	1/1:5,17:22:57.18:1391,57,0	1/1:4,20:25:54.19:1375,54,0	1/1:1,10:11:30.10:772,30,0
chr10	49700723	.	TGTCA	T	10850.19	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=17.450;DP=561;FS=1.055;HRun=0;HaplotypeScore=121.3453;InbreedingCoeff=0.9962;MQ=89.81;MQ0=0;MQRankSum=-17.725;QD=47.17;ReadPosRankSum=0.165;VQSLOD=5.4246;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:41:99:0,121,3172	0/0:13,0:13:39.12:0,39,1009	0/0:29,0:29:84.27:0,84,2122	0/0:40,0:40:99:0,117,3041	1/1:2,25:27:63.15:1169,63,0	0/0:27,0:27:78.25:0,78,2078	0/0:16,0:16:45.14:0,45,1175	1/1:2,24:26:69.14:1212,69,0	0/0:21,0:21:60.21:0,60,1643	1/1:3,21:24:57.16:1037,57,0	1/1:0,6:6:18.06:348,18,0	0/0:24,0:24:72.25:0,72,1972	0/0:22,0:22:66.23:0,66,1794	1/1:2,17:19:42.14:794,42,0	0/0:21,0:21:63.22:0,63,1690	0/0:21,0:21:60.21:0,60,1589	1/1:2,10:12:27.09:517,27,0	1/1:1,8:9:24.08:465,24,0	1/1:1,16:17:39.13:755,39,0	1/1:0,10:10:30.10:573,30,0	1/1:1,18:19:42.14:768,42,0	0/0:16,0:16:48.15:0,48,1217	0/0:16,0:16:45.14:0,45,1166	0/0:23,0:23:69.24:0,69,1876	1/1:0,17:17:48.16:929,48,0	1/1:1,15:16:42.14:813,42,0	1/1:2,21:23:63.22:1181,63,0	1/1:0,5:5:15.05:291,15,0
chr10	49700874	.	CAA	C	8512.76	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=17.502;DP=545;FS=49.328;HRun=6;HaplotypeScore=126.6315;InbreedingCoeff=0.9769;MQ=69.47;MQ0=0;MQRankSum=-10.312;QD=30.29;ReadPosRankSum=3.759;VQSLOD=1.4386;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:69.17:0,69,1151	0/0:10,0:10:30.10:0,30,540	0/0:24,0:24:53.20:0,53,816	0/0:14,0:14:4.08:0,4,460	1/1:2,17:19:30.09:384,30,0	0/0:27,0:27:72.23:0,72,1268	0/0:10,0:10:27.08:0,27,458	1/1:9,14:23:42.11:526,42,0	0/0:19,0:19:54.19:0,54,973	1/1:4,20:24:54.17:691,54,0	1/1:1,20:21:57.18:729,57,0	0/0:22,0:22:54.19:0,54,973	0/0:14,0:14:42.14:0,42,729	1/1:1,15:16:45.13:577,45,0	0/0:17,0:17:48.16:0,48,830	0/0:24,0:24:66.21:0,66,1160	1/1:2,15:17:45.14:576,45,0	1/1:2,13:15:39.12:499,39,0	1/1:7,12:18:33.09:422,33,0	1/1:2,34:36:99:1267,99,0	1/1:1,9:10:21.07:269,21,0	0/0:18,0:18:51.15:0,51,863	0/0:24,0:24:72.24:0,72,1266	0/0:18,0:18:54.19:0,54,972	1/1:5,22:27:60.19:768,60,0	1/1:0,19:19:57.18:730,57,0	1/1:2,27:29:69.22:883,69,0	1/1:0,6:6:15.05:192,15,0
chr10	49701001	.	T	TCTAC	8835.30	PASS	AB=0.957;AC=29;AF=0.518;AN=56;BaseQRankSum=14.703;DP=570;FS=1.479;HRun=0;HaplotypeScore=159.0655;InbreedingCoeff=0.9018;MQ=69.62;MQ0=1;MQRankSum=-0.721;QD=25.24;ReadPosRankSum=-1.233;VQSLOD=4.5892;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:51.14:0,51,889	0/0:8,0:8:24.07:0,24,423	0/0:10,0:9:20.06:0,20,254	0/1:21,0:20:34.04:34,0,114	1/1:35,0:35:83.28:603,83,0	0/0:31,0:31:93.20:0,93,1499	0/0:6,0:6:18.01:0,18,214	1/1:36,7:42:99:1512,111,0	0/0:20,0:20:57.10:0,57,901	1/1:31,0:31:77.12:694,77,0	1/1:27,0:27:74.61:585,75,0	0/0:19,0:19:51.12:0,51,831	0/0:19,0:19:57.07:0,57,921	1/1:15,0:15:41.91:344,42,0	0/0:27,0:27:81.13:0,81,1213	0/0:15,0:15:42.12:0,42,725	1/1:14,0:14:38.68:294,39,0	1/1:14,0:14:35.75:269,36,0	1/1:11,3:13:36.03:495,36,0	1/1:10,14:25:46.82:787,47,0	1/1:3,2:5:2.77:21,3,0	0/0:14,0:14:39.12:0,39,707	0/0:16,0:16:45.09:0,45,722	0/0:10,0:10:30.05:0,30,462	1/1:34,0:34:95.23:787,95,0	1/1:21,0:21:56.89:539,57,0	1/1:11,21:32:69.22:1504,69,0	1/1:18,0:18:50.56:366,51,0
chr10	49701022	.	C	CT	11423.89	PASS	AB=0.890;AC=30;AF=0.536;AN=56;BaseQRankSum=11.574;DP=530;FS=2.910;HRun=1;HaplotypeScore=98.5640;InbreedingCoeff=0.8412;MQ=64.00;MQ0=1;MQRankSum=-3.932;QD=35.92;ReadPosRankSum=0.148;VQSLOD=4.7432;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:57.16:0,57,777	0/0:9,0:9:27.09:0,27,378	0/1:6,1:5:25.03:25,0,153	0/1:17,1:16:23.69:24,0,249	1/1:1,28:29:72.25:1138,72,0	0/0:29,0:29:87.29:0,87,1217	0/0:6,0:6:18.06:0,18,252	1/1:1,32:32:96.31:1416,96,0	0/0:19,0:19:57.18:0,57,778	1/1:0,23:23:69.23:1072,69,0	1/1:0,25:25:69.24:1091,69,0	0/0:19,0:19:57.19:0,57,797	0/0:17,0:17:51.17:0,51,711	1/1:1,11:12:33.11:522,33,0	0/0:26,0:26:75.25:0,75,1049	0/0:16,0:16:48.15:0,48,654	1/1:1,14:15:36.12:565,36,0	1/1:0,15:15:42.14:659,42,0	1/1:1,10:9:27.09:407,27,0	1/1:0,24:24:45.15:618,45,0	1/1:0,6:6:6.02:88,6,0	0/0:19,0:19:57.19:0,57,797	0/0:14,0:14:42.14:0,42,587	0/0:12,0:12:36.12:0,36,503	1/1:0,31:31:78.27:1234,78,0	1/1:0,17:17:51.17:795,51,0	1/1:1,37:38:84.27:1151,84,0	1/1:0,13:13:39.13:619,39,0
chr10	49701642	.	ACTG	A	452.98	PASS	AB=0.899;AC=15;AF=0.288;AN=52;BaseQRankSum=6.623;DP=327;FS=2.527;HRun=0;HaplotypeScore=351.2783;InbreedingCoeff=0.3174;MQ=44.27;MQ0=0;MQRankSum=-1.197;QD=4.53;ReadPosRankSum=0.347;VQSLOD=1.2545;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:30.92:0,31,341	0/0:8,0:8:19.71:0,20,160	0/0:5,0:5:3.63:0,4,79	0/0:10,0:6:14.96:0,15,201	0/1:11,2:13:37.42:67,0,37	0/0:21,0:21:50.51:0,51,472	0/0:19,0:19:45.17:0,45,415	0/0:5,0:5:14.99:0,15,126	0/0:14,0:14:35.86:0,36,318	0/1:14,1:15:9.85:75,0,10	0/1:12,1:13:13.88:40,0,14	0/0:19,0:19:41.75:0,42,384	0/0:17,0:17:46.33:0,46,457	0/1:8,0:8:13.40:17,0,13	0/0:14,0:14:36.82:0,37,312	0/0:11,0:11:20.92:0,21,186	1/1:2,0:2:4.04:16,4,0	1/1:2,0:2:1.26:13,1,0	./.	0/1:5,3:8:17.85:18,0,24	./.	0/0:23,0:23:44.96:0,45,474	0/0:23,0:23:53.61:0,54,494	0/0:18,0:18:36.34:0,36,290	1/1:15,3:18:23.82:151,24,0	0/1:8,2:10:10.05:48,0,10	1/1:5,4:9:17.46:164,17,0	0/1:2,0:2:1.68:3,0,2
chr10	49701652	.	ACG	A	226.68	PASS	AB=0.690;AC=14;AF=0.280;AN=50;BaseQRankSum=7.807;DP=301;FS=17.680;HRun=0;HaplotypeScore=395.1500;InbreedingCoeff=0.2270;MQ=43.64;MQ0=0;MQRankSum=0.050;QD=2.41;ReadPosRankSum=3.390;VQSLOD=0.0393;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:56.68:0,57,955	0/0:8,0:8:21.03:0,21,375	0/0:1,0:1:2.98:0,3,22	0/1:5,1:4:2.68:3,0,32	0/1:6,4:13:30.83:49,0,31	0/0:21,0:21:54.10:0,54,753	0/0:22,0:22:63.10:0,63,792	./.	0/0:14,0:14:36.12:0,36,497	0/1:7,5:15:0.63:55,0,1	0/1:7,4:13:17.29:17,0,47	0/0:14,0:14:39.06:0,39,523	0/0:18,0:18:54.12:0,54,734	1/1:2,1:6:5.04:24,5,0	0/0:14,0:14:36.10:0,36,614	0/0:11,0:11:26.75:0,27,459	1/1:1,0:1:2.97:20,3,0	1/1:1,0:1:2.98:21,3,0	./.	0/0:2,3:8:1.37:0,1,42	./.	0/0:20,0:20:60.03:0,60,792	0/0:21,0:21:60.02:0,60,775	0/0:15,0:15:30.18:0,30,385	0/1:2,7:18:20.26:66,0,20	0/1:1,7:9:2.62:16,0,3	0/1:3,3:9:57.75:86,0,58	0/1:2,0:2:1.14:13,0,1
chr10	49701658	.	CCATACG	C	2414.77	PASS	AB=0.883;AC=23;AF=0.460;AN=50;BaseQRankSum=9.217;DP=276;FS=4.530;HRun=0;HaplotypeScore=399.9693;InbreedingCoeff=0.6127;MQ=41.89;MQ0=0;MQRankSum=1.688;QD=21.56;ReadPosRankSum=2.912;VQSLOD=1.8993;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:8.79:0,9,296	0/0:6,0:6:13.72:0,14,136	0/0:1,0:1:1.25:0,1,3	0/1:6,0:3:0.82:1,0,70	0/1:6,7:13:17.56:220,0,18	0/0:19,0:19:25.55:0,26,556	0/0:20,0:20:44.20:0,44,447	./.	0/0:12,0:12:32.66:0,33,374	1/1:4,11:15:38.70:530,39,0	1/1:3,10:13:27.52:316,28,0	0/0:13,0:13:29.07:0,29,311	0/0:17,0:17:48.60:0,49,624	1/1:3,3:6:12.02:127,12,0	0/0:12,0:12:3.49:0,3,314	0/0:10,0:10:0.33:0,0,245	1/1:1,0:1:3.01:73,3,0	1/1:0,1:1:3.01:73,3,0	./.	1/1:5,3:8:14.37:223,14,0	./.	0/0:17,0:17:17.67:0,18,434	0/0:19,0:19:19.91:0,20,477	0/1:11,0:11:23.34:23,0,216	1/1:9,9:18:42.01:428,42,0	1/1:2,7:9:22.24:251,22,0	1/1:6,3:9:21.93:234,22,0	1/1:0,2:2:6.02:97,6,0
chr10	49701660	.	AT	A	248.61	PASS	AB=0.919;AC=15;AF=0.300;AN=50;BaseQRankSum=6.728;DP=272;FS=2.979;HRun=1;HaplotypeScore=375.2724;InbreedingCoeff=0.5653;MQ=39.10;MQ0=0;MQRankSum=-0.273;QD=3.07;ReadPosRankSum=4.009;VQSLOD=-0.7541;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:33.38:0,33,327	0/0:6,0:6:17.58:0,18,119	0/0:1,0:1:2.94:0,3,18	0/0:3,0:2:2.99:0,3,48	1/1:10,3:13:2.64:62,3,0	0/0:19,0:19:46.33:0,46,230	0/0:20,0:20:50.18:0,50,261	./.	0/0:12,0:12:30.62:0,31,151	1/1:13,2:15:6.83:122,7,0	1/1:13,0:13:4.67:33,5,0	0/0:13,0:13:32.36:0,32,164	0/0:17,0:17:42.42:0,42,241	0/0:6,0:6:0.46:0,0,1	0/0:12,0:12:33.70:0,34,221	0/0:9,0:9:26.60:0,27,182	1/1:0,1:1:3:25,3,0	1/1:1,0:1:2.98:21,3,0	./.	0/0:7,1:8:2.13:0,2,25	./.	0/0:17,0:17:32.38:0,32,170	0/0:19,0:19:35.50:0,35,173	0/0:11,0:11:11.37:0,11,70	0/1:15,3:18:4.80:31,0,5	0/1:8,1:9:2.63:18,0,3	1/1:8,1:9:15.75:83,16,0	0/1:2,0:2:1.03:3,0,1
chr10	49701663	.	CG	C	488.29	PASS	AB=1.000;AC=27;AF=0.540;AN=50;BaseQRankSum=2.623;DP=296;FS=49.978;HRun=1;HaplotypeScore=390.8353;InbreedingCoeff=0.3186;MQ=41.00;MQ0=0;MQRankSum=-1.186;QD=2.18;ReadPosRankSum=2.344;VQSLOD=-0.7240;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:42.80:0,43,215	0/0:6,0:6:12.28:0,12,97	0/0:3,0:2:1.15:0,1,3	0/0:3,0:2:2.87:0,3,15	1/1:12,1:13:3.76:44,4,0	0/1:19,0:19:4.49:39,0,4	0/1:23,0:23:6.05:32,0,6	./.	1/1:13,0:13:3.54:17,4,0	1/1:15,0:15:5.31:76,5,0	1/1:12,1:13:3.63:25,4,0	0/1:15,0:15:21.76:22,0,29	1/1:19,0:19:5.07:44,5,0	0/0:6,0:6:2.18:0,2,5	0/0:14,0:13:17.09:0,17,159	0/0:11,0:11:30.76:0,31,230	1/1:1,0:1:2.94:18,3,0	1/1:1,0:1:2.90:16,3,0	./.	0/0:6,2:8:2.72:0,3,26	./.	1/1:20,0:20:0.25:56,0,0	1/1:23,0:23:13.92:82,14,0	1/1:13,0:13:13.70:66,14,0	0/1:18,0:18:9.33:11,0,9	0/1:9,0:9:3.68:12,0,4	1/1:6,3:9:14.44:81,14,0	0/0:2,0:2:2.24:0,2,8
chr10	49701667	.	ACG	A	582.81	PASS	AB=0.672;AC=18;AF=0.346;AN=52;BaseQRankSum=6.574;DP=299;FS=0.609;HRun=0;HaplotypeScore=385.9048;InbreedingCoeff=0.3826;MQ=43.45;MQ0=0;MQRankSum=-0.415;QD=5.89;ReadPosRankSum=2.997;VQSLOD=1.6485;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:47.23:0,47,220	0/0:6,0:6:17.94:0,18,177	0/1:2,0:2:0.02:0,0,0	0/0:3,0:3:3.87:0,4,23	0/1:4,7:13:13.37:108,0,13	0/0:19,0:19:47.39:0,47,422	0/0:23,0:23:65.70:0,66,542	./.	0/0:13,0:13:35.87:0,36,296	1/1:7,7:16:16.22:174,16,0	0/1:7,4:13:13.38:38,0,13	0/0:16,0:16:35.43:0,35,317	0/0:20,0:20:59.34:0,59,471	1/1:2,1:6:5.71:59,6,0	0/0:14,0:13:30.19:0,30,333	0/0:10,0:10:30.09:0,30,352	1/1:0,1:1:3.01:31,3,0	1/1:1,0:1:3:26,3,0	0/0:1,0:1:0.89:0,1,2	0/1:2,4:8:26.92:27,0,37	./.	0/0:20,0:20:53.62:0,54,431	0/0:23,0:23:64.79:0,65,496	0/0:12,0:12:15.90:0,16,160	0/1:3,10:18:24.49:134,0,24	1/1:2,7:9:6.61:69,7,0	0/1:4,4:9:36.32:56,0,36	1/1:2,0:2:4.51:22,5,0
chr10	49701668	.	CG	C	2996.38	PASS	AB=0.927;AC=39;AF=0.750;AN=52;BaseQRankSum=-0.537;DP=294;FS=0.695;HRun=1;HaplotypeScore=366.2458;InbreedingCoeff=0.3443;MQ=43.65;MQ0=0;MQRankSum=-0.916;QD=10.78;ReadPosRankSum=0.130;VQSLOD=1.6628;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:20:24.71:84,25,0	0/1:6,0:6:7.02:7,0,31	0/1:3,0:2:0:0,0,0	0/0:2,0:3:2.84:0,3,9	1/1:9,4:13:5:45,5,0	1/1:19,0:19:48.66:341,49,0	1/1:23,0:23:60.82:397,61,0	./.	1/1:13,0:13:35.52:236,36,0	1/1:10,6:16:14.11:111,14,0	1/1:6,7:13:2.65:27,3,0	1/1:16,0:16:31.09:230,31,0	1/1:20,0:20:59.03:394,59,0	1/1:4,2:6:5.61:27,6,0	0/1:12,1:12:14.36:14,0,42	0/0:10,0:10:29.87:0,30,226	1/1:1,0:1:2.98:22,3,0	1/1:0,1:1:2.98:22,3,0	0/0:1,0:1:1.25:0,1,3	0/1:7,1:8:9.08:9,0,12	./.	1/1:18,0:18:49.58:337,50,0	1/1:22,0:22:63.65:454,64,0	1/1:11,0:11:23.81:172,24,0	1/1:16,2:18:10.16:84,10,0	0/1:7,2:9:2.78:17,0,3	1/1:5,4:9:17.94:101,18,0	0/0:0,2:2:0.98:0,1,5
chr10	49701673	.	CT	C	5708.05	PASS	AB=0.770;AC=43;AF=0.796;AN=54;BaseQRankSum=-3.135;DP=296;FS=1.656;HRun=1;HaplotypeScore=344.9960;InbreedingCoeff=0.4150;MQ=43.55;MQ0=0;MQRankSum=-0.026;QD=20.99;ReadPosRankSum=-2.381;VQSLOD=2.8272;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,17:18:53.44:375,53,0	1/1:0,0:4:8.26:23,8,0	0/0:2,0:1:3.01:0,3,47	0/0:5,0:5:4.56:0,5,36	1/1:10,4:14:1.69:52,2,0	1/1:0,20:20:57.18:712,57,0	1/1:0,22:22:63.20:775,63,0	1/1:3,0:3:2.37:7,2,0	1/1:0,11:11:33.11:417,33,0	1/1:9,7:16:6.50:86,7,0	1/1:7,7:14:1:29,1,0	1/1:0,13:13:35.98:418,36,0	1/1:0,20:20:60.19:752,60,0	0/0:4,2:6:1.35:0,1,3	1/1:1,0:10:20.57:61,21,0	0/0:11,0:11:32.43:0,32,208	1/1:1,0:1:2.99:24,3,0	1/1:0,1:1:3:26,3,0	1/1:1,0:1:2.60:10,3,0	0/1:8,1:9:5.07:5,0,20	./.	1/1:0,18:18:54.12:646,54,0	1/1:0,23:23:66.21:823,66,0	1/1:1,10:11:24.08:305,24,0	0/1:18,2:20:5.77:35,0,6	1/1:9,2:11:1.50:40,2,0	1/1:6,3:9:15.78:87,16,0	0/1:0,2:2:0.28:0,0,4
chr10	49701675	.	AT	A	6165.13	PASS	AB=1.000;AC=43;AF=0.796;AN=54;BaseQRankSum=-3.185;DP=299;FS=1.741;HRun=1;HaplotypeScore=344.8805;InbreedingCoeff=0.4014;MQ=48.05;MQ0=0;MQRankSum=-0.847;QD=22.67;ReadPosRankSum=-3.190;VQSLOD=2.5332;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,17:18:53.58:381,54,0	1/1:4,0:4:9.46:32,9,0	0/0:5,0:3:0.14:0,0,39	0/0:5,0:5:3.88:0,4,27	1/1:14,0:14:6.60:81,7,0	1/1:20,0:20:57.18:732,57,0	1/1:22,0:22:63.20:812,63,0	1/1:3,0:3:8.44:50,8,0	1/1:11,0:11:33.11:433,33,0	1/1:16,0:16:10.53:174,11,0	1/1:14,0:14:6.60:53,7,0	1/1:13,0:13:35.98:427,36,0	1/1:20,0:20:60.19:769,60,0	0/0:6,0:6:1.39:0,1,3	1/1:11,0:10:24.98:100,25,0	0/0:11,0:11:32.16:0,32,187	1/1:1,0:1:3:25,3,0	1/1:1,0:1:3:26,3,0	1/1:1,0:1:2.60:10,3,0	0/1:9,0:9:17.93:18,0,18	./.	1/1:18,0:18:54.10:668,54,0	1/1:23,0:23:66.21:852,66,0	1/1:11,0:11:24.08:312,24,0	0/1:20,0:20:6.71:47,0,7	1/1:10,1:11:3.86:67,4,0	1/1:9,0:9:17.15:94,17,0	0/1:2,0:2:2.62:3,0,3
chr10	49701691	.	A	AC	2393.92	PASS	AB=0.878;AC=15;AF=0.268;AN=56;BaseQRankSum=2.370;DP=559;FS=8.048;HRun=1;HaplotypeScore=583.2808;InbreedingCoeff=-0.0881;MQ=38.99;MQ0=0;MQRankSum=-0.369;QD=6.72;ReadPosRankSum=-3.774;VQSLOD=0.6152;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:51.16:0,51,627	0/0:7,0:7:21.02:0,21,233	0/1:9,0:6:3.59:4,0,147	0/0:4,0:4:8.06:0,8,81	0/1:47,7:60:99:303,0,127	0/0:22,0:22:60.13:0,60,708	0/0:22,0:22:66.14:0,66,792	0/1:13,1:16:40.19:40,0,69	0/0:12,0:12:30.09:0,30,369	0/1:31,12:52:27.24:487,0,27	0/1:21,13:36:45.35:313,0,45	0/0:14,0:14:42.13:0,42,517	0/0:18,0:18:54.11:0,54,633	1/1:10,4:18:5.40:165,5,0	0/0:13,0:12:36.11:0,36,442	0/0:12,0:12:36.07:0,36,426	0/1:7,0:10:29.62:30,0,36	0/1:3,0:3:0.47:32,0,0	0/0:8,1:7:7.50:0,8,37	0/1:29,10:45:63.43:379,0,63	0/1:4,0:3:4.39:8,0,4	0/0:17,0:17:51.12:0,51,611	0/0:23,0:23:63.20:0,63,777	0/0:11,0:11:15.05:0,15,185	0/1:24,6:40:38.57:324,0,39	0/1:30,2:35:49.50:217,0,50	0/1:15,6:22:43.65:237,0,44	0/1:1,2:3:7.09:8,0,7
chr10	49701692	.	CG	C	6409.71	PASS	AB=1.000;AC=30;AF=0.536;AN=56;BaseQRankSum=0.617;DP=553;FS=2.367;HRun=1;HaplotypeScore=564.4534;InbreedingCoeff=0.7672;MQ=39.08;MQ0=0;MQRankSum=-1.785;QD=17.37;ReadPosRankSum=-2.378;VQSLOD=0.9380;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:50.88:0,51,429	0/0:7,0:7:20.82:0,21,164	0/0:9,0:6:2.60:0,3,113	0/1:5,0:4:19.67:20,0,56	1/1:19,41:59:99:1159,141,0	0/0:21,0:21:59.53:0,60,467	0/0:22,0:22:65.81:0,66,556	1/1:7,9:16:5.91:273,6,0	0/0:12,0:12:29.99:0,30,260	1/1:28,24:52:83.15:1021,83,0	1/1:22,13:35:61.29:558,61,0	0/0:14,0:14:41.87:0,42,345	0/0:18,0:18:51.37:0,51,404	1/1:10,9:18:39.40:373,39,0	0/0:13,0:12:35.90:0,36,299	0/0:12,0:12:35.88:0,36,298	1/1:3,7:10:26.72:207,27,0	1/1:0,3:3:8.99:94,9,0	1/1:1,7:6:14.93:113,15,0	1/1:20,25:45:94.80:935,95,0	1/1:0,4:3:9.03:113,9,0	0/0:17,0:17:48.71:0,49,404	0/0:21,0:21:62.65:0,63,517	0/1:11,0:11:18.98:19,0,100	1/1:25,15:40:70.92:561,71,0	1/1:14,21:35:49.63:573,50,0	1/1:13,10:22:53.80:365,54,0	1/1:2,1:3:0.89:25,1,0
chr10	49701694	.	AC	A	5732	PASS	AB=0.864;AC=27;AF=0.482;AN=56;BaseQRankSum=0.693;DP=565;FS=3.374;HRun=1;HaplotypeScore=571.5445;InbreedingCoeff=0.7713;MQ=40.41;MQ0=1;MQRankSum=-1.425;QD=15.79;ReadPosRankSum=-1.288;VQSLOD=1.1103;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:37.99:0,38,756	0/0:8,0:8:24.03:0,24,323	0/0:5,0:6:3.28:0,3,84	0/1:6,0:6:11.01:11,0,44	1/1:41,20:60:99:1122,136,0	0/0:22,0:22:59.98:0,60,822	0/0:22,0:22:66.15:0,66,952	0/1:13,3:16:13.78:259,0,14	0/0:13,0:13:33.11:0,33,498	1/1:45,7:52:72.65:802,73,0	1/1:30,5:35:55.48:435,55,0	0/0:14,0:14:42.14:0,42,632	0/0:18,0:18:51.01:0,51,700	1/1:17,2:18:37:337,37,0	0/0:13,0:12:36.04:0,36,514	0/0:12,0:12:36.12:0,36,527	1/1:5,5:10:26.83:230,27,0	1/1:2,1:3:8.87:75,9,0	1/1:2,6:6:14.94:115,15,0	1/1:32,13:45:84.71:842,85,0	1/1:4,0:3:9.03:113,9,0	0/0:17,0:17:48.05:0,48,665	0/0:22,0:22:65.91:0,66,882	0/0:12,0:12:17.96:0,18,218	1/1:31,9:40:63.99:468,64,0	1/1:24,11:35:52.77:585,53,0	1/1:17,6:22:51.49:322,51,0	0/1:2,1:3:4.18:17,0,4
chr10	49701695	.	C	CA	3183.82	PASS	AB=1.000;AC=25;AF=0.446;AN=56;BaseQRankSum=-0.253;DP=581;FS=10.876;HRun=5;HaplotypeScore=592.5429;InbreedingCoeff=0.7632;MQ=41.52;MQ0=1;MQRankSum=-1.886;QD=8.56;ReadPosRankSum=1.119;VQSLOD=-0.5530;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:54.03:0,54,555	0/0:8,0:8:23.89:0,24,236	0/1:11,0:7:15.73:16,0,62	0/0:10,0:6:6.94:0,7,45	1/1:61,1:61:35.89:504,36,0	0/0:22,0:22:51.12:0,51,545	0/0:23,0:23:63.11:0,63,656	0/1:16,0:16:36.37:89,0,36	0/0:14,0:14:33.08:0,33,353	1/1:52,1:53:54.54:442,55,0	1/1:37,0:37:31.51:248,32,0	0/0:15,0:15:42.10:0,42,448	0/0:18,0:18:42.10:0,42,447	1/1:19,0:18:6.98:89,7,0	0/0:13,0:12:33.08:0,33,352	0/0:12,0:12:30.07:0,30,320	1/1:9,1:10:24:154,24,0	1/1:4,0:4:7.78:47,8,0	1/1:9,0:7:14.96:124,15,0	1/1:44,2:46:58.14:522,58,0	0/0:4,0:3:4.17:0,4,11	0/0:17,0:17:45.11:0,45,474	0/0:23,0:23:57.14:0,57,605	0/0:11,0:11:15.03:0,15,156	1/1:41,0:41:57.87:439,58,0	1/1:36,0:36:33.19:333,33,0	1/1:24,1:24:51.18:372,51,0	0/1:3,0:3:0.19:17,0,0
chr10	49701699	.	AACT	A	5000.90	PASS	AB=0.965;AC=29;AF=0.518;AN=56;BaseQRankSum=2.088;DP=585;FS=0.327;HRun=0;HaplotypeScore=601.8649;InbreedingCoeff=0.6942;MQ=44.09;MQ0=1;MQRankSum=-0.706;QD=12.69;ReadPosRankSum=2.358;VQSLOD=3.6837;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:53.57:0,54,669	0/0:8,0:8:7.17:0,7,297	0/1:15,0:10:46.84:47,0,201	0/1:12,0:7:18.05:18,0,86	1/1:59,3:61:87.62:924,88,0	0/0:19,0:19:53.78:0,54,731	0/0:23,0:23:65.34:0,65,756	0/1:15,2:17:42.02:148,0,42	0/0:15,0:15:36.05:0,36,510	1/1:48,5:53:99:769,109,0	1/1:35,2:37:50.12:442,50,0	0/0:15,0:15:44.24:0,44,551	0/0:16,0:16:44.59:0,45,568	1/1:15,4:18:8.67:175,9,0	0/0:13,0:13:32.55:0,33,434	0/0:12,0:12:29.77:0,30,430	1/1:9,1:10:25.45:219,25,0	1/1:4,0:4:3.05:17,3,0	1/1:9,0:7:17.14:98,17,0	1/1:44,2:46:33.63:539,34,0	1/1:4,0:3:6.26:22,6,0	0/0:17,0:17:48.08:0,48,684	0/0:25,0:25:41.23:0,41,775	0/0:9,0:9:14.78:0,15,156	1/1:33,7:40:38.21:692,38,0	1/1:37,0:37:47.64:473,48,0	1/1:24,1:24:43.34:385,43,0	1/1:3,0:3:1:33,1,0
chr10	49701700	.	ACT	A	5552.32	PASS	AB=0.980;AC=29;AF=0.518;AN=56;BaseQRankSum=0.301;DP=573;FS=1.481;HRun=0;HaplotypeScore=572.4881;InbreedingCoeff=0.7411;MQ=44.41;MQ0=1;MQRankSum=-1.259;QD=14.46;ReadPosRankSum=4.072;VQSLOD=4.2027;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:19:55.52:0,56,566	0/0:8,0:8:12.38:0,12,217	0/1:17,0:11:35.10:35,0,191	0/1:13,0:8:8.96:9,0,74	1/1:59,2:61:99:1059,129,0	0/0:20,0:20:54:0,54,580	0/0:22,0:22:65.83:0,66,658	0/1:15,1:16:18.77:201,0,19	0/0:15,0:15:36.04:0,36,401	1/1:50,2:52:92:750,92,0	1/1:33,1:34:54.15:503,54,0	0/0:15,0:15:44.85:0,45,446	0/0:16,0:16:41.44:0,41,453	1/1:19,0:18:39.04:253,39,0	0/0:13,0:13:32.95:0,33,349	0/0:11,0:11:30:0,30,336	1/1:10,0:10:26.57:202,27,0	1/1:3,0:3:8.46:54,8,0	1/1:8,0:7:17.56:131,18,0	1/1:44,2:46:91.45:875,91,0	1/1:4,0:3:8.83:63,9,0	0/0:17,0:17:43.76:0,44,495	0/0:24,0:24:41.70:0,42,606	0/0:9,0:9:14.87:0,15,141	1/1:39,0:39:57.98:594,58,0	1/1:35,0:35:65.84:477,66,0	1/1:23,0:22:21.91:312,22,0	1/1:3,0:3:1.84:36,2,0
chr10	49701704	.	ACT	A	2238.81	PASS	AB=0.819;AC=11;AF=0.196;AN=56;BaseQRankSum=-3.163;DP=563;FS=0.399;HRun=0;HaplotypeScore=554.1884;InbreedingCoeff=-0.2387;MQ=47.15;MQ0=2;MQRankSum=-0.994;QD=6.60;ReadPosRankSum=1.505;VQSLOD=1.2598;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:46.46:0,46,485	0/0:7,0:7:1.04:0,1,208	0/1:18,2:13:28.96:29,0,237	0/0:14,0:9:4.37:0,4,211	0/1:51,8:58:99:309,0,166	0/0:22,0:22:58.30:0,58,649	0/0:22,0:22:49.94:0,50,529	0/1:15,1:16:67.49:67,0,178	0/0:15,0:15:39.11:0,39,472	0/1:39,12:51:99:369,0,131	0/1:20,13:33:57.80:464,0,58	0/0:15,0:15:40.44:0,40,438	0/0:15,0:15:38.17:0,38,444	0/1:14,5:18:80.16:80,0,86	0/0:12,0:12:35.08:0,35,379	0/0:12,0:12:14.45:0,14,350	0/0:9,0:9:22.77:0,23,125	0/0:3,0:3:7.73:0,8,57	0/0:9,1:9:20.49:0,20,166	0/1:36,10:46:99:382,0,361	0/0:5,0:4:5.90:0,6,22	0/0:15,0:15:39.10:0,39,502	0/0:22,0:22:61:0,61,656	0/0:7,0:7:11.62:0,12,119	0/1:31,7:38:99:282,0,122	0/1:30,3:33:99:158,0,130	0/1:15,6:20:99:211,0,179	0/1:1,2:3:5.64:33,0,6
chr10	49701716	.	AC	A	1612.95	PASS	AB=0.877;AC=19;AF=0.339;AN=56;BaseQRankSum=1.473;DP=571;FS=12.396;HRun=1;HaplotypeScore=513.4256;InbreedingCoeff=0.4021;MQ=49.53;MQ0=3;MQRankSum=-2.954;QD=4.72;ReadPosRankSum=0.960;VQSLOD=0.3421;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:41.93:0,42,509	0/0:8,0:8:23.96:0,24,289	0/0:29,0:17:39.38:0,39,454	0/0:21,0:14:16.07:0,16,212	1/1:34,23:57:29.72:434,30,0	0/0:20,0:20:54.01:0,54,706	0/0:17,0:17:44.80:0,45,490	0/1:15,0:15:39.89:40,0,46	0/0:16,0:16:41.74:0,42,498	0/1:44,8:52:25.87:226,0,26	0/1:26,7:33:18.45:133,0,18	0/0:12,0:12:33.10:0,33,466	0/0:15,0:15:42.10:0,42,580	0/1:18,2:19:28.87:40,0,29	0/0:13,0:13:33.09:0,33,458	0/0:12,0:11:33.11:0,33,501	1/1:4,5:9:18.31:148,18,0	1/1:3,1:4:3.36:39,3,0	1/1:9,1:9:18.93:96,19,0	0/1:47,1:48:38.78:89,0,39	0/0:5,0:4:0.81:0,1,3	0/0:16,0:16:47.59:0,48,509	0/0:20,0:20:59.62:0,60,770	0/0:6,0:6:8.96:0,9,108	0/1:29,9:38:16.50:169,0,17	1/1:19,14:33:12.03:267,12,0	1/1:19,1:20:11.85:100,12,0	0/1:2,1:3:4.27:20,0,4
chr10	49701718	.	A	AAC	3632.79	PASS	AB=0.863;AC=14;AF=0.250;AN=56;BaseQRankSum=6.178;DP=570;FS=93.533;HRun=0;HaplotypeScore=585.8791;InbreedingCoeff=-0.1604;MQ=50.10;MQ0=3;MQRankSum=-2.144;QD=10.94;ReadPosRankSum=3.365;VQSLOD=0.5889;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:42.02:0,42,555	0/0:8,0:8:24.08:0,24,357	0/0:32,0:20:44.82:0,45,494	0/0:23,0:14:11.65:0,12,273	0/1:43,14:57:99:660,0,159	0/0:20,0:20:54.11:0,54,760	0/0:16,0:16:39.04:0,39,520	0/1:15,0:15:51.55:82,0,52	0/0:16,0:16:39.05:0,39,535	0/1:39,11:50:76.26:599,0,76	0/1:28,4:32:60.83:321,0,61	0/0:11,0:11:33.11:0,33,502	0/0:15,0:15:45.12:0,45,660	0/1:14,6:19:15.03:327,0,15	0/0:13,0:13:33.11:0,33,491	0/0:12,0:11:33.11:0,33,504	0/1:7,2:9:86.71:87,0,90	0/1:3,1:4:19.17:49,0,19	0/0:10,0:9:14.92:0,15,137	0/1:37,9:46:99:599,0,235	1/1:2,3:4:4.19:61,4,0	0/0:17,0:17:51.16:0,51,724	0/0:20,0:20:54.14:0,54,791	0/0:6,0:6:9.03:0,9,127	0/1:34,4:38:99:254,0,117	0/1:25,8:33:78.57:483,0,79	0/1:18,2:20:99:110,0,162	0/1:3,0:3:0.94:1,0,9
chr10	49701719	.	AACCCCCC	A	11569.55	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=9.454;DP=553;FS=5.162;HRun=0;HaplotypeScore=518.2066;InbreedingCoeff=0.9278;MQ=47.15;MQ0=3;MQRankSum=-5.690;QD=34.95;ReadPosRankSum=5.778;VQSLOD=4.3487;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:41.70:0,42,1591	0/0:8,0:8:24.08:0,24,892	0/0:30,0:18:48.44:0,48,1662	0/0:22,0:13:31.92:0,32,830	1/1:53,2:55:99:1976,145,0	0/0:20,0:20:54.11:0,54,1801	0/0:16,0:16:39.05:0,39,1243	1/1:10,3:13:21:616,21,0	0/0:15,0:15:39.05:0,39,1218	1/1:47,0:47:99:1361,113,0	1/1:29,1:30:82.85:1106,83,0	0/0:11,0:11:33.11:0,33,1230	0/0:15,0:15:45.15:0,45,1673	1/1:19,0:18:45.09:580,45,0	0/0:13,0:13:36.12:0,36,1354	0/0:12,0:11:33.11:0,33,1380	1/1:9,0:9:27.09:402,27,0	1/1:4,0:4:1.06:104,1,0	1/1:10,0:9:21.07:384,21,0	1/1:44,3:47:99:1946,120,0	1/1:4,0:3:3.01:31,3,0	0/0:17,0:17:51.18:0,51,1764	0/0:19,0:19:54.14:0,54,1911	0/0:6,0:6:12.04:0,12,375	1/1:37,0:37:96.66:1133,97,0	1/1:33,0:33:79.33:979,79,0	1/1:20,0:20:59.82:888,60,0	1/1:3,0:3:7.41:65,7,0
chr10	49701720	.	ACCCCCCC	A	9827.47	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=8.614;DP=460;FS=3.188;HRun=7;HaplotypeScore=406.2109;InbreedingCoeff=0.9467;MQ=50.24;MQ0=3;MQRankSum=-4.358;QD=41.29;ReadPosRankSum=4.640;VQSLOD=-0.5896;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:45.15:0,45,1690	0/0:8,0:8:24.08:0,24,869	0/0:29,0:18:37.07:0,37,1646	0/0:22,0:13:31.92:0,32,808	1/1:19,23:46:99:1830,122,0	0/0:20,0:20:48.16:0,48,1458	0/0:15,0:16:33.10:0,33,1045	1/1:4,5:10:30.08:652,30,0	0/0:15,0:15:33.11:0,33,993	1/1:17,9:32:84.13:1030,84,0	1/1:6,7:16:42.01:593,42,0	0/0:11,0:11:33.11:0,33,1009	0/0:15,0:15:45.15:0,45,1411	1/1:7,2:9:25.93:268,26,0	0/0:13,0:13:36.08:0,36,1314	0/0:13,0:12:36.12:0,36,1456	1/1:2,6:9:26.84:497,27,0	1/1:1,1:3:8.77:134,9,0	1/1:0,7:8:21.07:532,21,0	1/1:15,16:33:86.60:1603,87,0	1/1:3,1:3:5.62:28,6,0	0/0:17,0:17:51.18:0,51,1508	0/0:18,0:18:51.17:0,51,1575	0/0:6,0:6:11.97:0,12,301	1/1:9,9:22:63.27:862,63,0	1/1:14,14:31:72.49:936,72,0	1/1:2,8:13:34.71:796,35,0	1/1:0,1:1:3.01:66,3,0
chr10	49702485	.	A	AAC	14698.72	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=16.623;DP=579;FS=0.997;HRun=0;HaplotypeScore=101.6409;InbreedingCoeff=0.9991;MQ=79.62;MQ0=0;MQRankSum=-5.360;QD=48.67;ReadPosRankSum=0.759;VQSLOD=5.5255;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,120,1703	0/0:9,0:9:24.08:0,24,363	0/0:18,0:18:45.14:0,45,625	0/0:24,0:24:62.37:0,62,926	1/1:1,21:23:54.01:943,54,0	0/0:23,0:23:66.18:0,66,947	0/0:22,0:22:60.19:0,60,887	1/1:4,24:28:78.21:1348,78,0	0/0:20,0:20:60.19:0,60,889	1/1:2,19:21:63.11:1087,63,0	1/1:0,15:15:42.14:774,42,0	0/0:14,0:14:39.13:0,39,590	0/0:16,0:16:48.14:0,48,687	1/1:1,11:13:30.10:569,30,0	0/0:20,0:20:60.18:0,60,867	0/0:15,0:15:45.15:0,45,681	1/1:3,32:37:96.33:1798,96,0	1/1:1,20:21:54.19:1024,54,0	1/1:2,16:18:48.08:838,48,0	1/1:0,17:17:51.02:886,51,0	1/1:0,33:33:93.32:1740,93,0	0/0:15,0:15:42.14:0,42,635	0/0:14,0:14:42.13:0,42,615	0/0:24,0:24:69.23:0,69,1025	1/1:1,20:21:57.19:1060,57,0	1/1:2,16:20:57.13:927,57,0	1/1:1,26:27:69.07:1307,69,0	1/1:0,7:7:21.07:398,21,0
chr10	49702671	.	A	AT	5764.58	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-16.971;DP=563;FS=1.179;HRun=5;HaplotypeScore=120.9276;InbreedingCoeff=0.9972;MQ=77.99;MQ0=0;MQRankSum=-1.229;QD=32.39;ReadPosRankSum=3.097;VQSLOD=3.7028;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,26:27:66.21:868,66,0	0/0:7,0:7:21.01:0,21,213	0/0:12,0:12:31.81:0,32,311	0/0:19,0:19:49.31:0,49,470	0/0:25,0:25:69.11:0,69,726	1/1:0,19:20:54.17:706,54,0	1/1:1,23:24:63.20:829,63,0	0/0:26,0:26:60.45:0,60,620	1/1:0,13:13:27.09:355,27,0	0/0:19,0:19:51.09:0,51,525	0/0:24,0:24:63.16:0,63,677	1/1:2,10:12:21.07:276,21,0	1/1:3,14:17:39.13:513,39,0	0/0:17,0:17:51.12:0,51,541	0/0:18,0:18:54.12:0,54,572	0/0:14,0:14:42.10:0,42,445	0/0:30,0:30:75.19:0,75,805	0/0:34,0:34:95.99:0,96,952	0/0:19,0:19:53.83:0,54,533	0/0:16,0:16:45.11:0,45,483	0/0:20,0:20:57.06:0,57,597	1/1:1,24:25:69.14:885,69,0	1/1:0,21:21:50.95:668,51,0	1/1:3,16:19:51.16:664,51,0	0/0:20,0:20:59.71:0,60,587	0/0:33,0:33:96.21:0,96,1019	0/0:26,0:26:75.08:0,75,790	0/0:6,0:6:18.05:0,18,193
chr10	49702928	.	G	GGA	2021.77	PASS	AB=0.901;AC=16;AF=0.286;AN=56;BaseQRankSum=11.125;DP=518;FS=77.707;HRun=0;HaplotypeScore=165.0445;InbreedingCoeff=-0.4006;MQ=56.90;MQ0=4;MQRankSum=-9.716;QD=7.30;ReadPosRankSum=-1.991;VQSLOD=-0.0164;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:77.72:0,78,1194	0/1:2,3:5:55.80:112,0,56	0/0:31,0:21:18.99:0,19,539	0/0:57,0:27:38.57:0,39,750	0/1:15,0:16:99:124,0,353	0/0:14,0:14:37.30:0,37,587	0/1:17,3:20:99:110,0,666	0/0:14,0:13:8.39:0,8,332	0/1:14,1:16:99:117,0,494	0/1:23,1:25:99:241,0,639	0/0:8,0:8:24.08:0,24,391	0/1:18,1:19:6.79:7,0,566	0/1:10,0:11:58.34:58,0,209	0/0:17,0:17:47.84:0,48,679	0/1:19,1:19:99:143,0,502	0/1:19,0:19:99:268,0,325	0/0:23,0:23:62.71:0,63,991	0/1:14,1:15:83.48:83,0,541	0/0:9,0:9:21.03:0,21,274	0/0:15,0:15:5.49:0,5,594	0/1:20,0:20:1.54:2,0,566	0/1:16,2:19:99:382,0,386	0/1:13,4:18:99:250,0,355	0/0:21,0:21:56.19:0,56,895	0/1:21,1:23:99:178,0,408	0/1:18,1:19:9.45:9,0,690	0/1:10,1:11:89.79:90,0,301	0/0:1,0:1:3.01:0,3,45
chr10	49702944	.	G	GGA	2865.06	PASS	AB=0.824;AC=21;AF=0.375;AN=56;BaseQRankSum=12.104;DP=450;FS=90.102;HRun=0;HaplotypeScore=162.3468;InbreedingCoeff=-0.5101;MQ=53.42;MQ0=1;MQRankSum=-9.386;QD=8.53;ReadPosRankSum=-0.015;VQSLOD=-0.0639;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:30:70.13:70,0,922	1/1:2,1:3:8.81:90,9,0	0/0:23,0:17:30.94:0,31,408	0/0:31,0:14:3.82:0,4,271	0/1:11,1:14:99:130,0,263	0/1:12,0:14:32.82:33,0,498	0/1:13,2:16:76.59:77,0,588	0/0:7,0:10:0.08:0,0,259	0/1:10,2:14:99:110,0,440	0/1:22,2:26:99:182,0,714	0/0:8,0:8:18.06:0,18,289	0/1:14,0:18:99:146,0,509	0/1:9,2:12:99:149,0,200	0/1:13,1:17:99:156,0,486	0/1:16,3:21:99:238,0,525	0/1:15,5:21:99:338,0,379	0/1:16,1:17:2.78:3,0,597	0/1:10,1:13:96.96:97,0,449	0/0:8,0:8:18.05:0,18,271	0/1:12,0:14:59.44:59,0,450	0/1:14,0:15:21.60:22,0,361	0/1:11,5:17:99:399,0,339	0/1:10,9:20:99:234,0,189	0/0:15,0:16:29.35:0,29,486	0/1:14,2:21:99:330,0,383	0/0:12,1:14:5.45:0,5,492	0/1:8,2:12:99:159,0,354	0/0:1,0:1:3.01:0,3,49
chr10	49702960	.	G	GGA	899.35	PASS	AB=0.862;AC=16;AF=0.296;AN=54;BaseQRankSum=8.290;DP=294;FS=36.383;HRun=0;HaplotypeScore=116.7144;InbreedingCoeff=-0.3259;MQ=50.57;MQ0=0;MQRankSum=-6.107;QD=4.84;ReadPosRankSum=-2.091;VQSLOD=1.1386;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:21,2:23:12.85:13,0,563	1/1:2,0:2:5.54:28,6,0	0/0:9,0:6:9.03:0,9,135	0/0:10,0:4:5.03:0,5,56	0/1:12,2:14:48.26:48,0,55	0/1:8,3:11:79.66:80,0,127	0/0:9,0:9:5.44:0,5,266	0/0:6,0:6:15.05:0,15,223	0/1:8,0:9:60.34:60,0,148	0/1:13,0:14:39.57:40,0,468	0/0:6,0:6:9.03:0,9,145	0/0:12,1:13:9.10:0,9,320	0/0:6,1:7:1.13:0,1,122	0/1:12,2:14:91.53:92,0,201	0/1:13,4:17:99:104,0,187	0/1:14,3:17:86.69:87,0,248	0/0:11,0:11:17.98:0,18,198	0/1:6,2:8:63.43:63,0,93	0/0:7,0:7:14.40:0,14,139	0/1:10,2:12:60.88:61,0,229	0/0:10,0:10:10.28:0,10,166	0/1:8,3:11:99:173,0,111	0/1:13,1:14:6.74:7,0,110	0/0:9,0:9:12.04:0,12,162	0/1:8,2:10:94.89:95,0,156	0/0:11,0:11:26.73:0,27,338	0/1:9,1:10:99:101,0,156	./.
chr10	49702967	.	A	AAAGGAG	2722.38	PASS	AB=1.000;AC=34;AF=0.739;AN=46;BaseQRankSum=2.849;DP=210;FS=2.031;HRun=0;HaplotypeScore=109.5604;InbreedingCoeff=-0.1683;MQ=44.77;MQ0=0;MQRankSum=-0.314;QD=14.11;ReadPosRankSum=0.904;VQSLOD=3.0834;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:21:15.93:482,16,0	./.	./.	./.	1/1:8,1:12:0.89:2,1,0	0/1:9,0:9:7.04:87,0,7	0/0:5,0:5:1.84:0,2,16	0/1:3,0:3:13.51:60,0,14	1/1:5,0:5:3.01:45,3,0	1/1:9,0:9:23.94:417,24,0	./.	0/1:7,0:7:4.67:5,0,28	1/1:7,0:7:8.84:92,9,0	0/1:12,0:12:25.80:73,0,26	0/1:9,0:9:12.46:23,0,12	1/1:12,0:12:12.18:171,12,0	0/1:9,0:9:9.90:89,0,10	1/1:4,0:4:8.52:124,9,0	1/1:5,0:5:9.03:184,9,0	1/1:9,0:9:6.02:75,6,0	0/1:9,0:9:12.64:48,0,13	0/1:8,0:8:8.07:41,0,8	1/1:12,0:12:11.11:184,11,0	1/1:4,0:4:2.92:17,3,0	0/1:8,0:8:6.94:63,0,7	1/1:10,0:10:20.21:464,20,0	0/1:9,0:9:8.63:106,0,9	./.
chr10	49703762	.	A	AG	1531.46	PASS	AB=0.965;AC=32;AF=0.667;AN=48;BaseQRankSum=-3.987;DP=158;FS=0.000;HRun=1;HaplotypeScore=157.7566;InbreedingCoeff=-0.1113;MQ=41.21;MQ0=1;MQRankSum=0.856;QD=10.49;ReadPosRankSum=-0.102;VQSLOD=1.3636;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:5,2:6:4.27:68,0,4	0/1:6,0:6:2.04:162,0,2	0/0:3,0:1:0:0,0,0	./.	0/1:12,0:11:7.05:36,0,7	1/1:11,0:11:19.18:180,19,0	1/1:2,2:3:2.30:36,2,0	./.	1/1:9,0:9:11.70:132,12,0	0/1:6,1:7:28.92:29,0,62	0/0:5,0:5:5.84:0,6,31	0/1:6,0:6:4.67:33,0,5	1/1:6,0:6:12.34:129,12,0	0/1:2,0:2:16.34:33,0,16	1/1:5,0:5:8.98:108,9,0	0/1:8,0:8:39.37:145,0,39	1/1:3,1:4:11.58:110,12,0	0/0:2,0:2:2.92:0,3,17	./.	1/1:3,0:2:3.01:36,3,0	./.	1/1:11,0:11:12.30:125,12,0	1/1:5,1:6:0.70:20,1,0	0/1:12,0:12:6.92:45,0,7	0/1:11,0:11:46.23:58,0,46	0/1:7,0:7:15.54:16,0,56	1/1:6,0:6:3.40:53,3,0	1/1:3,0:3:9.02:112,9,0
chr10	49703768	.	A	AG	1415.61	PASS	AB=0.753;AC=19;AF=0.365;AN=52;BaseQRankSum=8.965;DP=198;FS=0.000;HRun=2;HaplotypeScore=103.0254;InbreedingCoeff=-0.5410;MQ=43.55;MQ0=1;MQRankSum=-0.955;QD=9.70;ReadPosRankSum=2.088;VQSLOD=1.4257;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:9:15.05:0,15,203	0/1:2,4:6:65.65:111,0,66	0/0:5,0:2:5.57:0,6,30	0/0:5,0:2:3.01:0,3,38	0/1:6,6:11:99:211,0,106	0/1:13,1:14:14.94:15,0,291	0/1:3,1:3:31.30:31,0,32	0/0:1,0:1:3.01:0,3,38	0/1:9,1:10:21.35:21,0,236	0/1:3,6:9:36.18:263,0,36	0/1:3,2:5:13.18:13,0,66	0/1:6,2:8:63.27:63,0,68	0/1:4,2:6:53.20:53,0,106	0/1:4,1:5:34.85:35,0,75	0/0:7,0:7:21.03:0,21,265	0/1:8,3:11:99:113,0,263	0/0:5,0:5:7.94:0,8,119	0/0:4,0:4:6.49:0,6,55	./.	0/1:2,1:2:26.19:38,0,26	./.	0/1:9,3:12:64.62:65,0,133	1/1:5,1:6:1.64:42,2,0	0/0:13,1:14:0.08:0,0,37	0/1:7,6:13:99:216,0,187	0/1:5,3:8:99:120,0,163	0/1:9,2:11:64.18:64,0,222	0/1:1,2:3:26.30:84,0,26
chr10	49703775	.	G	GA	448.36	PASS	AB=0.924;AC=19;AF=0.365;AN=52;BaseQRankSum=8.902;DP=215;FS=5.166;HRun=3;HaplotypeScore=104.8160;InbreedingCoeff=-0.4424;MQ=42.85;MQ0=1;MQRankSum=-1.738;QD=2.87;ReadPosRankSum=3.677;VQSLOD=0.2251;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:10:15:0,15,164	0/1:6,0:6:1.51:2,0,64	0/0:7,0:4:10.27:0,10,115	0/0:5,0:2:3.01:0,3,37	0/1:8,4:11:22.65:71,0,23	0/0:13,1:14:3.52:0,4,261	0/1:5,0:4:5.34:5,0,35	0/0:1,0:1:2.96:0,3,19	0/1:12,0:12:5.89:6,0,174	0/1:7,3:10:26.92:150,0,27	0/1:4,2:6:8.35:8,0,28	0/1:8,0:8:8.58:9,0,61	0/1:6,0:6:15.50:15,0,100	0/1:5,0:5:13.91:14,0,91	0/0:9,0:9:24.07:0,24,288	0/1:8,3:11:58.63:59,0,230	0/0:5,0:5:7.53:0,8,98	0/0:5,0:5:8.76:0,9,81	./.	1/1:3,0:2:2.99:24,3,0	./.	0/1:13,0:13:7.93:8,0,133	0/1:6,0:6:17.45:20,0,17	0/1:15,0:15:10.84:11,0,61	0/1:13,1:14:59.25:59,0,161	0/1:5,3:8:61.87:62,0,143	0/1:13,0:13:22:22,0,227	0/1:3,0:3:19.60:45,0,20
chr10	49703776	.	AAGTCAGGC	A	2907.13	PASS	AB=0.995;AC=29;AF=0.558;AN=52;BaseQRankSum=8.118;DP=226;FS=15.153;HRun=0;HaplotypeScore=119.3854;InbreedingCoeff=-0.1703;MQ=42.69;MQ0=1;MQRankSum=-1.476;QD=15.97;ReadPosRankSum=4.327;VQSLOD=1.7144;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:9:11.90:0,12,256	0/1:6,0:6:70.26:132,0,70	0/0:8,0:4:5.56:0,6,218	0/0:5,0:2:3.01:0,3,78	0/1:12,0:11:51.52:179,0,52	1/1:12,3:15:33.10:586,33,0	1/1:5,0:4:8.98:106,9,0	0/1:2,0:2:14.72:15,0,32	1/1:14,1:15:2.07:292,2,0	0/1:10,0:10:99:144,0,134	0/1:7,0:7:38.75:50,0,39	1/1:8,0:8:12.04:245,12,0	1/1:6,0:6:15.04:243,15,0	0/1:5,0:5:71.60:72,0,137	0/1:9,0:9:33.49:33,0,306	0/1:11,0:11:9.91:10,0,618	0/1:5,0:5:79.94:80,0,112	0/0:4,0:4:8.79:0,9,60	./.	1/1:3,0:2:3.01:36,3,0	./.	1/1:12,1:13:27.51:436,28,0	1/1:7,0:7:6.46:71,6,0	0/1:15,1:16:26.97:40,0,27	0/1:15,0:15:99:210,0,445	0/1:8,0:8:26.22:26,0,218	0/0:15,0:15:3.03:0,3,528	0/1:4,0:4:62.44:62,0,152
chr10	49703777	.	AGTC	A	928.91	PASS	AB=0.895;AC=21;AF=0.404;AN=52;BaseQRankSum=9.808;DP=228;FS=8.039;HRun=0;HaplotypeScore=110.2985;InbreedingCoeff=-0.4969;MQ=42.57;MQ0=2;MQRankSum=-1.096;QD=5.05;ReadPosRankSum=5.084;VQSLOD=1.3280;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:9:12.04:0,12,216	0/1:2,0:6:52.22:52,0,70	0/0:9,0:4:9.92:0,10,215	0/0:5,0:2:3.01:0,3,74	0/1:11,1:11:29.81:169,0,30	0/1:15,0:15:47.64:48,0,84	1/1:4,1:4:3.72:54,4,0	0/1:1,1:2:8.91:9,0,11	0/1:15,0:15:8.09:8,0,98	0/1:6,4:10:99:209,0,107	0/1:7,0:7:19.12:19,0,58	0/1:8,0:8:19.50:25,0,19	0/1:5,1:6:37.07:48,0,37	0/1:4,1:5:40.42:40,0,113	0/0:9,0:9:19.58:0,20,256	0/1:11,0:11:41.46:41,0,463	0/0:5,0:5:13.43:0,13,122	0/0:4,0:4:9:0,9,108	./.	0/1:3,1:3:13.53:39,0,14	./.	0/1:12,1:13:35.26:35,0,38	0/1:6,1:7:1.43:24,0,1	0/1:16,0:16:3.08:3,0,94	0/1:15,0:15:94.94:95,0,350	0/1:8,0:8:45.77:46,0,273	0/1:13,2:15:25.57:26,0,444	0/1:2,2:4:78.21:85,0,78
chr10	49703779	.	T	TCAGG	396.96	PASS	AB=1.000;AC=18;AF=0.333;AN=54;BaseQRankSum=-0.839;DP=237;FS=0.000;HRun=0;HaplotypeScore=117.2674;InbreedingCoeff=0.1216;MQ=42.96;MQ0=3;MQRankSum=-0.768;QD=4.18;ReadPosRankSum=-3.071;VQSLOD=1.6110;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:4,7:11:6.02:145,6,0	0/1:6,0:6:18.16:18,0,48	0/0:10,0:4:6:0,6,54	0/0:5,0:2:2.94:0,3,18	0/1:12,0:11:18.70:19,0,49	0/0:16,0:16:32.19:0,32,252	0/0:4,0:3:7.97:0,8,48	1/1:2,0:2:2.99:23,3,0	0/0:15,0:15:14.81:0,15,125	0/0:9,0:9:21.55:0,22,102	0/1:8,0:8:9.28:9,0,22	0/0:9,0:9:3.78:0,4,51	0/0:6,0:6:11.09:0,11,102	0/0:5,0:5:8.84:0,9,55	0/0:9,0:9:23.88:0,24,227	0/1:11,0:11:33.56:34,0,96	1/1:5,0:5:4.56:36,5,0	1/1:4,0:4:2.99:24,3,0	1/1:1,0:1:0.89:2,1,0	0/1:4,0:3:10.95:14,0,11	./.	0/0:14,0:14:14.79:0,15,132	0/0:7,0:7:3.87:0,4,20	0/0:17,0:17:5.90:0,6,37	0/0:15,0:15:8.16:0,8,93	0/1:11,0:10:15.05:15,0,40	0/1:15,0:15:2.22:161,0,2	0/1:4,0:4:11.91:47,0,12
chr10	49703781	.	A	AAGG	2198.64	PASS	AB=0.958;AC=21;AF=0.389;AN=54;BaseQRankSum=9.787;DP=252;FS=7.666;HRun=0;HaplotypeScore=108.6502;InbreedingCoeff=-0.6111;MQ=42.41;MQ0=4;MQRankSum=-1.259;QD=10.99;ReadPosRankSum=5.753;VQSLOD=2.3418;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:12:17.28:0,17,173	0/1:6,0:6:65.87:66,0,86	0/0:11,0:4:9.02:0,9,168	0/0:7,0:2:3.01:0,3,56	0/1:12,0:12:36.45:324,0,36	0/1:17,0:17:26.13:26,0,287	0/1:5,0:4:62.73:63,0,76	0/1:3,0:3:9.90:10,0,44	0/1:15,1:16:47.08:47,0,230	0/1:10,0:10:84.65:395,0,85	0/1:8,0:8:74.36:85,0,74	0/1:7,2:9:65.58:125,0,66	0/1:5,1:6:94.54:95,0,104	0/1:5,0:5:44.20:44,0,146	0/0:9,0:9:24.08:0,24,398	0/1:12,0:12:84.92:85,0,358	0/0:6,0:6:12.66:0,13,150	0/0:4,0:4:9.03:0,9,165	0/1:2,0:2:0:0,0,0	0/1:4,0:3:23.23:50,0,23	./.	0/1:12,2:14:99:138,0,149	0/1:7,0:7:30.64:56,0,31	0/1:16,1:17:26.73:27,0,109	0/1:10,5:15:99:389,0,326	0/1:11,0:10:99:144,0,285	0/1:15,0:15:80.90:81,0,484	0/1:5,0:5:61.24:100,0,61
chr10	49703783	.	GCA	G	850.46	PASS	AB=0.916;AC=20;AF=0.370;AN=54;BaseQRankSum=8.868;DP=259;FS=10.225;HRun=0;HaplotypeScore=107.9656;InbreedingCoeff=-0.3477;MQ=42.46;MQ0=4;MQRankSum=-1.533;QD=4.62;ReadPosRankSum=5.692;VQSLOD=1.6821;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:12:15.05:0,15,246	0/1:7,0:7:23.19:23,0,56	0/0:11,0:4:9.03:0,9,166	0/0:7,0:2:3.01:0,3,60	0/1:8,5:12:27.70:162,0,28	0/1:16,1:17:9.32:32,0,9	0/1:5,0:4:20.86:21,0,31	0/0:2,1:3:0.64:0,1,107	0/1:16,0:16:14.16:14,0,43	0/1:6,4:10:99:210,0,142	0/1:6,2:8:19.79:20,0,90	1/1:9,0:9:2.81:40,3,0	0/1:6,0:6:0.61:47,0,1	0/1:5,0:5:25.19:25,0,116	0/0:9,0:9:23.04:0,23,204	0/1:9,3:12:83.59:84,0,430	0/0:7,0:7:17.66:0,18,219	0/0:4,0:4:9.03:0,9,148	0/0:2,0:2:1.25:0,1,3	0/1:4,0:3:29.67:30,0,51	./.	0/1:13,0:15:5.44:65,0,5	1/1:7,0:8:0.77:33,1,0	0/1:16,0:16:10.95:11,0,38	0/0:16,1:17:3.70:0,4,412	0/1:9,3:11:85.03:85,0,343	0/1:16,0:16:35.89:36,0,581	0/1:5,0:5:59.26:59,0,150
chr10	49703787	.	GCA	G	350.14	PASS	AB=0.879;AC=13;AF=0.241;AN=54;BaseQRankSum=6.216;DP=285;FS=11.268;HRun=0;HaplotypeScore=114.5512;InbreedingCoeff=-0.2143;MQ=42.24;MQ0=4;MQRankSum=-2.028;QD=2.78;ReadPosRankSum=4.901;VQSLOD=1.3439;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:13:18.06:0,18,289	0/0:7,1:8:7.63:0,8,122	0/0:12,0:4:9.03:0,9,166	0/0:9,0:3:6.01:0,6,87	0/1:12,1:12:28.11:143,0,28	0/1:17,0:17:25.68:26,0,32	0/1:4,1:4:24.95:25,0,39	0/0:4,0:4:1.07:0,1,151	0/0:16,0:16:6.50:0,6,23	0/1:11,3:14:80.40:80,0,183	0/0:10,0:10:9.19:0,9,118	0/0:9,0:9:6.38:0,6,26	0/1:6,1:7:9.12:35,0,9	0/1:4,1:5:27.65:28,0,149	0/0:12,0:12:23.05:0,23,205	0/0:14,0:14:27.90:0,28,554	0/0:7,0:7:20.52:0,21,221	0/0:4,0:4:6.02:0,6,86	0/0:4,0:4:8.95:0,9,85	0/1:3,1:3:35.08:35,0,55	./.	0/1:14,1:15:16.29:16,0,25	1/1:6,1:7:1.50:21,1,0	0/1:17,0:17:2.97:3,0,39	0/0:20,0:20:11.12:0,11,522	0/0:14,0:13:31.65:0,32,413	0/1:14,2:16:8.28:8,0,629	0/1:4,2:6:70.79:71,0,183
chr10	49703796	.	CAGGCAGGA	C	2221.68	PASS	AB=0.886;AC=20;AF=0.357;AN=56;BaseQRankSum=1.099;DP=352;FS=36.718;HRun=0;HaplotypeScore=147.7114;InbreedingCoeff=0.3685;MQ=40.69;MQ0=7;MQRankSum=-3.810;QD=12.92;ReadPosRankSum=5.254;VQSLOD=1.2955;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:14:23.91:0,24,514	0/1:9,0:9:15.17:15,0,39	0/0:13,0:3:6.01:0,6,58	0/0:11,0:4:8.18:0,8,52	0/1:13,0:12:24.08:24,0,87	1/1:4,15:19:31.92:703,32,0	1/1:9,0:8:17.17:159,17,0	0/0:13,0:12:24.71:0,25,287	1/1:2,14:16:16.87:379,17,0	0/0:17,0:17:33:0,33,494	0/0:13,0:13:21.89:0,22,188	1/1:2,9:11:12.04:239,12,0	1/1:3,6:9:13.60:291,14,0	0/1:7,0:7:10.23:10,0,154	0/0:15,0:15:8.03:0,8,157	0/1:16,0:16:12.07:12,0,477	0/0:9,0:8:20.73:0,21,286	0/0:3,0:3:3.01:0,3,72	0/0:7,0:7:10.08:0,10,85	0/1:6,0:5:2.29:2,0,125	0/0:3,0:3:5.94:0,6,42	1/1:7,13:20:13.29:474,13,0	0/1:2,10:12:4.65:77,0,5	0/1:3,15:18:5.28:5,0,11	0/0:23,0:23:18.86:0,19,557	0/0:17,0:16:37.97:0,38,465	0/0:20,0:20:49.31:0,49,804	0/1:7,0:7:13.53:14,0,302
chr10	49703800	.	CAGGA	C	1035.30	PASS	AB=0.919;AC=14;AF=0.259;AN=54;BaseQRankSum=-0.810;DP=391;FS=11.019;HRun=0;HaplotypeScore=149.0716;InbreedingCoeff=0.3922;MQ=40.69;MQ0=7;MQRankSum=-1.948;QD=6.64;ReadPosRankSum=3.934;VQSLOD=1.4920;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:14:23.91:0,24,306	0/1:11,1:12:51.29:51,0,66	./.	0/0:11,0:4:5.19:0,5,27	0/0:15,0:14:15.25:0,15,88	1/1:20,0:20:11.40:229,11,0	1/1:13,0:12:15.65:165,16,0	0/0:14,0:13:32.81:0,33,268	0/1:17,0:17:1.09:125,0,1	0/0:21,0:21:40.67:0,41,353	0/0:12,0:12:23.64:0,24,167	1/1:11,0:11:7.79:73,8,0	1/1:10,0:10:8.71:101,9,0	0/0:8,0:8:14.83:0,15,134	0/1:5,11:16:4.19:229,0,4	0/1:15,0:15:53.47:53,0,194	0/0:10,0:10:24.93:0,25,212	0/0:0,0:7:3.01:0,3,48	0/0:8,0:8:11.90:0,12,85	0/0:9,0:8:17.97:0,18,182	0/0:5,0:5:11.93:0,12,92	0/1:25,0:25:31.73:137,0,32	0/1:17,0:17:15:37,0,15	0/0:17,0:17:3.40:0,3,18	0/0:25,0:25:54.86:0,55,500	0/0:17,0:16:32.40:0,32,297	0/0:20,0:20:39.77:0,40,465	0/0:7,0:7:15.49:0,15,178
chr10	49703907	.	G	GCAA	9440.89	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=11.464;DP=543;FS=8.271;HRun=0;HaplotypeScore=92.3147;InbreedingCoeff=0.9665;MQ=65.54;MQ0=1;MQRankSum=-2.734;QD=35.10;ReadPosRankSum=0.120;VQSLOD=5.2157;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:66.22:0,66,982	0/0:15,0:15:45.15:0,45,673	0/0:21,0:19:36.08:0,36,515	0/0:23,0:23:60.13:0,60,853	1/1:4,8:13:20.53:424,21,0	0/0:29,0:29:69.21:0,69,995	0/0:19,0:19:51.16:0,51,737	1/1:19,8:29:19.08:632,19,0	0/0:18,0:18:45.15:0,45,676	1/1:14,11:25:15.40:771,15,0	1/1:5,6:11:18.06:362,18,0	0/0:14,0:14:33.04:0,33,470	0/0:11,0:11:30.08:0,30,411	1/1:2,14:16:36.12:718,36,0	0/0:13,0:13:33.11:0,33,496	0/0:19,0:19:51.16:0,51,729	1/1:5,12:18:30.10:580,30,0	1/1:5,23:29:60.21:1213,60,0	1/1:4,6:11:24.03:407,24,0	1/1:12,7:20:1.97:499,2,0	1/1:4,8:13:26.94:422,27,0	0/0:22,0:22:51.17:0,51,737	0/0:17,0:17:24.03:0,24,335	0/0:26,0:26:66.22:0,66,983	1/1:4,18:22:51.08:946,51,0	1/1:13,15:28:44.83:996,45,0	1/1:1,18:19:48.12:929,48,0	1/1:2,13:15:27.09:542,27,0
chr10	49704200	.	CTG	C	814.78	PASS	AB=0.556;AC=21;AF=0.420;AN=50;BaseQRankSum=7.410;DP=341;FS=3.982;HRun=0;HaplotypeScore=38.7838;InbreedingCoeff=0.6915;MQ=56.92;MQ0=20;MQRankSum=-6.522;QD=20.37;ReadPosRankSum=-5.093;VQSLOD=2.0219;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,135,2726	0/0:14,0:14:42.13:0,42,817	0/0:27,0:1:3.01:0,3,59	0/0:21,0:2:6.02:0,6,111	1/1:0,4:4:5.98:57,6,0	0/0:19,0:18:54.19:0,54,1097	0/0:18,0:18:54.19:0,54,1086	1/1:0,2:1:2.97:20,3,0	0/0:17,0:17:51.18:0,51,1036	1/1:0,3:3:9.03:147,9,0	1/1:0,2:2:2.97:20,3,0	0/0:18,0:18:54.19:0,54,1096	0/0:15,0:15:45.11:0,45,806	1/1:0,7:7:12.04:195,12,0	0/0:27,0:27:81.28:0,81,1631	0/0:22,0:22:66.23:0,66,1340	./.	1/1:0,4:4:6.02:98,6,0	1/1:0,3:3:9.03:144,9,0	./.	0/1:2,8:10:80.28:103,0,80	0/0:15,0:15:45.15:0,45,914	0/0:12,0:12:36.12:0,36,722	0/0:28,0:28:84.29:0,84,1707	1/1:0,1:1:3.01:37,3,0	./.	1/1:0,3:3:9.01:121,9,0	1/1:0,1:1:3.01:49,3,0
chr10	49704982	.	G	GTT	2232.23	PASS	AB=0.792;AC=42;AF=0.750;AN=56;BaseQRankSum=3.608;DP=524;FS=2.368;HRun=11;HaplotypeScore=98.8372;InbreedingCoeff=0.5812;MQ=63.69;MQ0=4;MQRankSum=-0.010;QD=5.38;ReadPosRankSum=0.508;VQSLOD=0.1841;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,2:20:11.99:121,12,0	0/0:8,0:11:17.40:0,17,182	0/0:23,0:17:2.45:0,2,129	0/0:11,0:9:13.83:0,14,89	1/1:8,0:36:59.03:219,59,0	1/1:13,0:12:5.35:55,5,0	0/0:14,0:13:0.44:0,0,3	1/1:27,0:28:24.97:248,25,0	1/1:16,0:15:1.81:61,2,0	1/1:7,0:20:5.53:94,6,0	1/1:4,1:20:31.79:191,32,0	1/1:14,0:14:6.44:57,6,0	1/1:17,0:17:0.29:11,0,0	1/1:7,0:16:34.03:154,34,0	0/0:26,0:28:46.94:0,47,509	0/0:20,0:20:48.03:0,48,465	0/1:8,0:28:7.05:109,0,7	1/1:4,1:23:32.83:146,33,0	1/1:5,0:9:14.79:106,15,0	1/1:16,0:23:24.97:219,25,0	1/1:9,0:16:7.16:62,7,0	1/1:9,0:9:1.35:37,1,0	1/1:20,0:20:0.89:2,1,0	1/1:10,0:10:6:45,6,0	1/1:6,1:19:26.47:123,26,0	1/1:3,0:28:24.11:163,24,0	1/1:15,0:20:9.88:171,10,0	0/1:2,0:2:0:0,0,0
chr10	49704996	.	TGTTG	T	2338.09	PASS	AB=0.906;AC=20;AF=0.357;AN=56;BaseQRankSum=10.521;DP=489;FS=4.231;HRun=0;HaplotypeScore=107.2929;InbreedingCoeff=0.6279;MQ=60.34;MQ0=8;MQRankSum=-7.374;QD=12.31;ReadPosRankSum=-4.475;VQSLOD=1.9961;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:1.63:0,2,440	0/0:11,0:11:33.11:0,33,847	0/0:25,0:15:19.13:0,19,451	0/1:16,0:12:19.84:20,0,310	0/0:32,0:31:84.28:0,84,2160	1/1:13,3:15:39.06:494,39,0	1/1:7,3:10:15.05:217,15,0	0/1:29,0:28:35.98:36,0,610	1/1:9,4:13:36.10:481,36,0	0/0:20,0:18:48.07:0,48,1105	0/0:16,0:16:39.98:0,40,1098	1/1:7,2:12:31.74:384,32,0	1/1:19,1:20:12.04:186,12,0	0/0:14,0:14:16.50:0,17,768	0/0:22,0:22:60.20:0,60,1567	0/0:20,0:20:57.20:0,57,1557	0/0:23,0:23:66.19:0,66,1680	0/0:23,0:22:51.17:0,51,1274	0/1:8,0:8:18.93:19,0,221	0/0:24,0:26:17.85:0,18,781	0/0:12,0:13:14:0,14,179	1/1:4,4:8:21.02:233,21,0	1/1:15,3:18:12.04:169,12,0	1/1:8,2:10:21.53:255,22,0	0/0:16,0:16:39.09:0,39,976	0/0:22,0:22:56.93:0,57,1464	0/1:20,0:21:47.63:48,0,631	0/0:3,0:3:6.02:0,6,169
chr10	49705333	.	T	TTAAA	18137.91	PASS	AB=1.000;AC=36;AF=0.643;AN=56;BaseQRankSum=-7.429;DP=592;FS=9.189;HRun=0;HaplotypeScore=102.3080;InbreedingCoeff=0.3791;MQ=65.90;MQ0=2;MQRankSum=-1.028;QD=38.92;ReadPosRankSum=2.970;VQSLOD=4.6010;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:95.99:0,96,1453	0/0:7,0:7:21.05:0,21,237	0/0:26,0:18:21.64:0,22,361	0/0:18,0:16:38.21:0,38,502	1/1:1,33:36:98.71:1951,99,0	0/1:28,0:28:99:200,0,331	0/1:9,0:9:77.25:77,0,117	1/1:7,27:36:95.89:1427,96,0	0/1:14,0:14:99:136,0,117	1/1:2,26:28:81.17:1658,81,0	1/1:1,16:17:41.71:733,42,0	0/1:15,0:15:10.87:345,0,11	0/1:16,0:16:62.85:297,0,63	1/1:2,18:21:30.10:756,30,0	0/0:21,0:21:54.10:0,54,590	0/0:20,0:20:57.13:0,57,899	1/1:2,20:22:39.13:1032,39,0	1/1:4,37:42:56.08:1521,56,0	1/1:2,14:16:44.98:740,45,0	1/1:1,17:18:41.74:687,42,0	1/1:0,7:8:15.05:380,15,0	0/1:21,0:21:92.79:401,0,93	0/1:11,0:11:49.88:217,0,50	0/1:11,0:11:76.90:121,0,77	1/1:4,12:17:30.10:771,30,0	1/1:2,26:29:81.19:1741,81,0	1/1:4,29:36:83.87:2075,84,0	1/1:3,12:15:33.11:873,33,0
chr10	49705334	.	T	TAAACAAAC	11950.27	PASS	AB=1.000;AC=43;AF=0.768;AN=56;BaseQRankSum=2.343;DP=617;FS=12.974;HRun=0;HaplotypeScore=185.2361;InbreedingCoeff=0.9318;MQ=64.08;MQ0=2;MQRankSum=-3.888;QD=24.29;ReadPosRankSum=1.748;VQSLOD=3.4374;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:54.72:0,55,1675	0/0:0,0:7:21.06:0,21,361	0/0:26,0:18:15.43:0,15,180	0/0:17,0:15:23.56:0,24,449	1/1:35,0:35:55.49:239,55,0	1/1:20,9:29:27.09:1119,27,0	1/1:10,2:12:18.05:645,18,0	1/1:34,0:34:34.43:195,34,0	1/1:11,6:17:21.07:791,21,0	1/1:27,0:27:34.76:199,35,0	1/1:17,0:17:20.10:104,20,0	1/1:7,11:18:42.14:1718,42,0	1/1:12,8:20:42.14:1727,42,0	1/1:21,0:21:22.31:88,22,0	0/0:4,0:21:43.95:0,44,725	0/0:19,0:19:45.15:0,45,1128	1/1:22,0:22:29.95:110,30,0	1/1:42,0:42:41.37:138,41,0	1/1:15,0:15:16.49:145,16,0	1/1:17,0:17:15.20:52,15,0	0/1:8,0:8:0.04:16,0,0	1/1:14,14:29:57.20:2255,57,0	1/1:5,8:15:27.09:1094,27,0	1/1:9,4:14:18.06:632,18,0	1/1:17,0:17:21.48:75,21,0	1/1:31,0:31:19.79:273,20,0	1/1:36,0:36:60.24:229,60,0	1/1:16,0:16:27.01:105,27,0
chr10	49706701	.	AT	A	4269.93	PASS	AB=0.951;AC=33;AF=0.589;AN=56;BaseQRankSum=-6.019;DP=542;FS=4.169;HRun=13;HaplotypeScore=84.1957;InbreedingCoeff=0.7974;MQ=79.96;MQ0=0;MQRankSum=-2.071;QD=12.52;ReadPosRankSum=2.401;VQSLOD=5.1486;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,15:18:35.73:263,36,0	0/1:10,0:10:3.88:4,0,123	0/0:22,0:20:17.94:0,18,154	0/1:14,0:13:1.16:1,0,114	1/1:5,17:23:17.55:283,18,0	0/0:5,0:22:57.14:0,57,315	0/0:6,0:22:43.24:0,43,263	1/1:11,20:31:4.18:354,4,0	0/0:11,0:24:60.89:0,61,382	1/1:7,15:22:41.66:303,42,0	1/1:3,17:20:40.23:286,40,0	0/0:5,0:24:43.03:0,43,243	0/0:0,0:13:16.89:0,17,85	1/1:5,11:16:32.77:241,33,0	0/0:19,0:19:36.02:0,36,338	0/1:2,1:11:4.70:5,0,54	1/1:4,25:29:74.53:547,75,0	1/1:8,17:24:47.66:350,48,0	1/1:6,17:23:47.66:348,48,0	1/1:9,21:30:35.51:391,36,0	1/1:7,7:14:11.86:87,12,0	0/0:13,0:16:21.48:0,21,147	0/0:6,0:24:43.40:0,43,239	0/0:5,0:14:14.20:0,14,71	1/1:3,14:17:32.81:241,33,0	1/1:3,10:12:29.82:219,30,0	1/1:2,18:20:44.32:328,44,0	1/1:4,0:4:2.93:18,3,0
chr10	49707285	.	CATTTTATT	C	10427.92	PASS	AC=26;AF=0.500;AN=52;BaseQRankSum=10.955;DP=316;FS=0.000;HRun=0;HaplotypeScore=88.3062;InbreedingCoeff=0.8985;MQ=57.40;MQ0=1;MQRankSum=-8.306;QD=48.28;ReadPosRankSum=0.503;VQSLOD=4.5366;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:48.13:0,48,1712	0/0:5,0:5:9.03:0,9,343	./.	0/0:6,0:5:13.23:0,13,264	1/1:3,11:14:27.09:673,27,0	0/0:16,0:16:39.13:0,39,1543	0/0:8,0:8:18.06:0,18,723	1/1:14,23:37:69.18:1500,69,0	0/0:5,0:5:15.05:0,15,555	1/1:3,16:19:39.13:982,39,0	1/1:1,19:20:48.16:1242,48,0	0/0:8,0:8:18.06:0,18,762	0/0:9,0:9:24.08:0,24,1021	1/1:0,6:6:15.05:372,15,0	0/0:4,0:4:9.01:0,9,280	0/0:9,0:9:27.06:0,27,845	1/1:8,7:15:11.96:226,12,0	1/1:2,10:12:18.06:475,18,0	1/1:5,11:16:33.09:727,33,0	1/1:6,15:21:36.05:869,36,0	./.	0/0:1,0:1:3.01:0,3,128	0/0:7,0:7:21.06:0,21,700	0/0:2,0:2:6.02:0,6,188	1/1:0,12:12:30.10:776,30,0	1/1:0,19:19:54.16:1262,54,0	1/1:1,21:22:48.16:1245,48,0	1/1:1,2:3:3.01:80,3,0
chr10	49708398	.	GA	G	7126.18	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=7.093;DP=611;FS=8.230;HRun=9;HaplotypeScore=65.5891;InbreedingCoeff=0.9827;MQ=74.20;MQ0=1;MQRankSum=0.833;QD=21.93;ReadPosRankSum=0.427;VQSLOD=5.4756;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:35:78.86:0,79,423	0/0:6,0:6:18.05:0,18,208	0/0:17,1:18:5.66:0,6,312	0/0:15,0:15:30.52:0,31,314	1/1:5,23:28:66.02:604,66,0	0/0:16,0:16:48.14:0,48,553	0/0:20,1:21:23.62:0,24,510	1/1:3,22:24:66.02:599,66,0	0/0:18,0:18:45.12:0,45,509	1/1:5,28:32:81.02:735,81,0	1/1:4,13:18:41.06:363,41,0	0/0:15,0:15:39.59:0,40,450	0/0:25,0:25:60.17:0,60,683	1/1:4,23:27:57.03:522,57,0	0/0:17,1:18:23.69:0,24,527	0/0:25,0:25:66.20:0,66,761	1/1:7,21:28:66.03:601,66,0	1/1:3,16:19:48.02:439,48,0	1/1:3,10:14:32.03:276,32,0	1/1:5,21:26:48:439,48,0	1/1:1,16:17:48.03:439,48,0	0/0:23,0:24:60:0,60,664	0/0:27,0:27:57.14:0,57,638	0/0:22,0:22:57.17:0,57,658	1/1:1,21:22:63.03:577,63,0	1/1:5,27:31:74.97:674,75,0	1/1:3,24:27:69.03:631,69,0	1/1:1,8:9:26.51:228,27,0
chr10	49708947	.	G	GGAGA	1101.83	PASS	AB=1.000;AC=30;AF=0.625;AN=48;BaseQRankSum=0.098;DP=501;FS=13.120;HRun=0;HaplotypeScore=116.8449;InbreedingCoeff=0.5300;MQ=71.17;MQ0=16;MQRankSum=-2.635;QD=3.31;ReadPosRankSum=-2.513;VQSLOD=1.1705;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:37,0:37:8.99:88,9,0	0/0:4,0:6:3:0,3,28	./.	0/1:44,0:20:0:0,0,0	./.	1/1:16,0:17:3.01:33,3,0	0/0:17,0:17:6.02:0,6,91	1/1:40,0:40:21.94:207,22,0	0/0:17,0:17:6.01:0,6,73	1/1:21,0:18:19.41:250,19,0	./.	0/0:12,0:12:6.02:0,6,92	0/1:11,0:11:0:0,0,0	1/1:13,0:13:6.02:98,6,0	0/0:12,0:14:5.22:0,5,34	1/1:6,6:15:3:70,3,0	1/1:19,0:19:9.01:118,9,0	0/1:10,0:9:0:0,0,0	1/1:9,0:9:0.47:1,0,0	0/1:11,0:11:0:0,0,0	0/1:15,0:14:0:0,0,0	./.	0/1:20,0:20:0.06:0,0,0	0/0:22,0:22:12.03:0,12,164	1/1:10,0:9:0.47:1,0,0	1/1:18,0:17:9.03:128,9,0	1/1:18,0:16:15.05:205,15,0	1/1:5,0:4:3.01:34,3,0
chr10	49710586	.	AT	A	11195.35	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=11.104;DP=620;FS=14.910;HRun=2;HaplotypeScore=66.2237;InbreedingCoeff=0.9986;MQ=85.31;MQ0=0;MQRankSum=-2.943;QD=36.11;ReadPosRankSum=1.218;VQSLOD=3.8791;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:75.23:0,75,1076	0/0:8,0:8:24.08:0,24,355	0/0:30,0:30:87.27:0,87,1251	0/0:20,0:20:51.13:0,51,700	1/1:1,22:23:66.21:855,66,0	0/0:14,0:14:42.14:0,42,629	0/0:19,0:19:57.15:0,57,792	1/1:0,27:27:78.19:954,78,0	0/0:24,0:24:72.24:0,72,1076	1/1:1,20:21:60.19:779,60,0	1/1:0,19:19:57.19:740,57,0	0/0:27,0:27:81.25:0,81,1173	0/0:24,0:24:69.21:0,69,995	1/1:0,16:16:42.13:538,42,0	0/0:21,0:21:63.20:0,63,924	0/0:23,0:23:69.23:0,69,1010	1/1:0,25:25:72.23:934,72,0	1/1:0,20:20:51.17:662,51,0	1/1:1,23:24:69.21:882,69,0	1/1:0,21:21:63.20:816,63,0	1/1:1,27:28:81.26:1051,81,0	0/0:20,0:20:60.19:0,60,881	0/0:25,0:25:72.22:0,72,1037	0/0:28,0:28:84.17:0,84,1167	1/1:3,26:29:69.18:876,69,0	1/1:1,24:25:72.19:903,72,0	1/1:0,26:26:75.24:973,75,0	1/1:0,6:6:18.06:233,18,0
chr10	49711670	.	TTAA	T	434.96	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=0.430;DP=466;FS=9.303;HRun=0;HaplotypeScore=101.8234;InbreedingCoeff=0.8767;MQ=72.00;MQ0=0;MQRankSum=-1.433;QD=39.54;ReadPosRankSum=2.904;VQSLOD=4.9266;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,11:11:30.10:529,30,0	0/0:8,0:8:24.07:0,24,522	0/0:9,0:9:23.87:0,24,563	0/0:4,0:4:6.23:0,6,140	0/0:28,0:28:84.27:0,84,1921	0/0:18,0:18:48.15:0,48,1089	0/0:13,0:13:39.13:0,39,910	0/0:50,0:50:99:0,150,3446	0/0:9,0:9:27.09:0,27,636	0/0:24,0:24:69.23:0,69,1575	0/0:15,0:15:45.15:0,45,1046	0/0:12,0:12:33.11:0,33,751	0/0:20,0:20:54.17:0,54,1211	0/0:17,0:17:51.18:0,51,1185	0/0:12,0:12:36.12:0,36,852	0/0:12,0:12:36.12:0,36,822	0/0:23,0:23:69.24:0,69,1557	0/0:18,0:18:51.65:0,52,1163	0/0:15,0:15:42.14:0,42,934	0/0:30,0:30:90.31:0,90,2058	0/0:11,0:11:33.11:0,33,761	0/0:13,0:13:39.13:0,39,902	0/0:12,0:12:36.12:0,36,784	0/0:8,0:8:24.08:0,24,567	0/0:17,0:17:51.16:0,51,1125	0/0:25,0:25:69.23:0,69,1586	0/0:28,0:28:81.28:0,81,1904	0/0:4,0:4:12.04:0,12,283
chr10	49711722	.	G	GTA	4044.08	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=-11.582;DP=477;FS=29.685;HRun=0;HaplotypeScore=115.4214;InbreedingCoeff=0.9034;MQ=67.96;MQ0=0;MQRankSum=0.178;QD=33.15;ReadPosRankSum=0.555;VQSLOD=2.5810;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:10.87:0,11,208	0/1:5,0:5:9.08:9,0,68	0/0:10,0:10:14.78:0,15,152	0/0:6,0:5:14.88:0,15,141	0/0:26,0:26:41.35:0,41,421	1/1:2,18:20:48.16:803,48,0	1/1:5,6:12:18.06:301,18,0	0/0:36,0:35:50.95:0,51,472	1/1:2,13:15:39.13:647,39,0	0/0:19,0:19:50.03:0,50,306	0/0:17,0:17:50.60:0,51,359	1/1:5,11:16:12.24:480,12,0	1/1:3,17:20:39.13:652,39,0	0/0:16,0:16:44.61:0,45,313	0/0:11,0:11:29.74:0,30,208	0/0:17,0:17:39.13:0,39,513	0/0:21,0:21:28.68:0,29,320	0/0:15,0:15:38.13:0,38,270	0/0:17,0:17:38.43:0,38,251	0/0:23,0:23:56.48:0,56,397	0/0:22,0:22:42.55:0,43,419	1/1:2,11:13:24.08:400,24,0	1/1:0,14:14:30.10:502,30,0	1/1:1,6:7:15.05:251,15,0	0/0:21,0:21:50.54:0,51,353	0/0:26,0:26:68.05:0,68,450	0/0:26,0:26:77.49:0,77,557	0/0:12,0:12:30.29:0,30,219
chr10	49714356	.	GC	G	1083.43	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.161;DP=547;FS=3.359;HRun=2;HaplotypeScore=53.1489;InbreedingCoeff=0.9936;MQ=91.57;MQ0=0;MQRankSum=-3.884;QD=30.96;ReadPosRankSum=1.890;VQSLOD=3.3119;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,105,1556	1/1:0,12:12:36.12:465,36,0	0/0:23,0:23:63.20:0,63,913	0/0:24,0:24:69.23:0,69,1021	0/0:12,0:12:36.12:0,36,537	0/0:14,0:14:42.13:0,42,607	0/0:16,0:16:48.16:0,48,719	0/0:31,0:31:93.29:0,93,1354	0/0:15,0:15:42.13:0,42,605	0/0:17,0:17:51.16:0,51,728	0/0:14,0:14:39.12:0,39,560	0/0:22,0:22:66.15:0,66,938	0/0:19,0:19:57.19:0,57,848	0/0:16,0:16:48.16:0,48,711	1/1:0,23:22:57.19:740,57,0	0/0:22,0:22:66.21:0,66,969	0/0:29,0:29:87.29:0,87,1294	0/0:17,0:17:51.17:0,51,763	0/0:18,0:18:48.12:0,48,692	0/0:19,0:19:57.19:0,57,849	0/0:28,0:28:81.25:0,81,1190	0/0:17,0:17:51.17:0,51,762	0/0:7,0:7:21.07:0,21,313	0/0:18,0:18:54.18:0,54,806	0/0:18,0:18:51.17:0,51,763	0/0:15,0:15:45.15:0,45,666	0/0:38,0:38:99:0,105,1573	0/0:6,0:6:18.05:0,18,250
chr10	49714494	.	C	CTT	4400.96	PASS	AB=0.673;AC=47;AF=0.839;AN=56;BaseQRankSum=-2.027;DP=542;FS=3.274;HRun=13;HaplotypeScore=81.3657;InbreedingCoeff=0.0928;MQ=72.63;MQ0=5;MQRankSum=-0.214;QD=8.56;ReadPosRankSum=-0.367;VQSLOD=2.8410;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:10,29:40:38.61:493,39,0	1/1:6,0:6:10.83:90,11,0	0/0:28,0:18:6.25:0,6,55	0/1:29,0:21:10.98:11,0,61	1/1:7,11:19:28.31:292,28,0	1/1:7,0:16:14.97:52,15,0	0/1:8,0:19:3.44:3,0,61	1/1:8,7:17:22.03:201,22,0	0/1:7,0:15:13.15:25,0,13	1/1:12,15:30:9.86:304,10,0	1/1:4,11:16:22.26:205,22,0	1/1:9,0:24:5.92:30,6,0	0/1:7,0:17:13.70:26,0,14	1/1:14,0:14:20.88:193,21,0	1/1:15,0:14:24:220,24,0	0/1:4,0:15:21.91:22,0,53	1/1:3,18:22:15.01:173,15,0	1/1:4,2:18:14.45:129,14,0	1/1:4,4:17:38.12:357,38,0	1/1:9,10:24:36.89:350,37,0	0/1:3,8:13:8.88:154,0,9	1/1:3,0:18:28.50:128,28,0	0/1:7,0:14:11.43:16,0,11	1/1:6,0:21:17.01:58,17,0	1/1:10,7:17:10.85:127,11,0	1/1:7,16:24:47.95:492,48,0	1/1:8,12:24:20.01:201,20,0	1/1:1,2:6:5.51:49,6,0
chr10	49716946	.	CA	C	737.99	PASS	AB=0.928;AC=23;AF=0.411;AN=56;BaseQRankSum=5.873;DP=322;FS=5.304;HRun=1;HaplotypeScore=60.3976;InbreedingCoeff=0.5368;MQ=80.60;MQ0=1;MQRankSum=0.230;QD=5.63;ReadPosRankSum=4.059;VQSLOD=0.8675;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:54.07:0,54,660	0/0:1,0:1:2.94:0,3,18	0/0:18,0:17:18.90:0,19,405	0/0:12,0:12:22.09:0,22,332	1/1:6,1:7:12.84:85,13,0	0/0:11,0:11:29.54:0,30,348	0/0:17,0:17:48.01:0,48,587	0/1:15,0:15:40.60:41,0,65	0/0:14,0:14:27.05:0,27,346	1/1:5,1:6:9.27:80,9,0	1/1:2,1:3:3.40:18,3,0	0/0:16,0:16:48.09:0,48,601	0/0:9,0:9:21.02:0,21,272	1/1:11,0:11:22.28:128,22,0	0/0:16,0:16:29.49:0,29,198	0/0:14,0:14:41.96:0,42,472	1/1:15,0:15:6.84:83,7,0	1/1:14,0:14:14.50:90,14,0	0/1:9,0:9:24.97:25,0,29	1/1:5,0:5:9.44:45,9,0	0/1:14,2:16:9.72:109,0,10	0/0:12,0:12:14.97:0,15,188	0/0:9,0:9:20.28:0,20,218	0/0:22,0:21:54.06:0,54,680	0/1:2,1:3:17.94:27,0,18	0/1:8,0:8:5.80:22,0,6	1/1:16,2:18:15.69:174,16,0	1/1:1,0:1:1.82:5,2,0
chr10	49716947	.	AC	A	2563.73	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-1.211;DP=339;FS=0.997;HRun=8;HaplotypeScore=74.2975;InbreedingCoeff=0.8903;MQ=80.15;MQ0=1;MQRankSum=0.762;QD=18.85;ReadPosRankSum=2.182;VQSLOD=3.6902;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:48.03:0,48,523	0/0:1,0:2:2.88:0,3,15	0/0:18,0:17:19.20:0,19,298	0/0:13,0:13:29.93:0,30,291	1/1:1,6:7:17.87:149,18,0	0/0:13,0:13:30.01:0,30,326	0/0:19,0:19:45.02:0,45,493	1/1:3,11:14:29.99:280,30,0	0/0:13,0:13:33.05:0,33,366	1/1:4,4:8:11.97:107,12,0	1/1:4,1:5:2.69:28,3,0	0/0:17,0:17:48.05:0,48,534	0/0:10,0:10:23.99:0,24,255	1/1:1,9:10:24:229,24,0	0/0:1,0:16:28.84:0,29,151	0/0:14,0:14:33.08:0,33,385	1/1:2,13:15:36.01:338,36,0	1/1:0,14:14:36.06:347,36,0	1/1:2,7:9:18.02:174,18,0	1/1:2,4:6:12.02:116,12,0	1/1:5,11:16:39.01:364,39,0	0/0:13,0:13:11.42:0,11,166	0/0:9,0:9:12.02:0,12,133	0/0:24,0:23:45.09:0,45,526	1/1:3,1:4:6:58,6,0	1/1:2,7:9:17.99:163,18,0	1/1:3,15:18:42.06:401,42,0	1/1:0,1:1:3:29,3,0
chr10	49717065	.	G	GT	257.40	PASS	AB=0.989;AC=24;AF=0.462;AN=52;BaseQRankSum=3.031;DP=300;FS=3.437;HRun=0;HaplotypeScore=211.4921;InbreedingCoeff=-0.0636;MQ=26.99;MQ0=15;MQRankSum=0.482;QD=1.18;ReadPosRankSum=-0.883;VQSLOD=2.3028;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:20,0:18:12.36:12,0,63	1/1:7,0:3:4.79:58,5,0	./.	./.	1/1:17,2:16:3.86:11,4,0	0/1:10,0:8:28.67:35,0,29	0/0:11,0:11:4.54:0,5,37	0/1:16,1:15:16.38:16,0,153	0/1:16,0:14:0.76:1,0,69	0/1:15,0:14:18.64:19,0,21	1/1:9,1:10:3.30:37,3,0	0/0:14,0:13:1.42:0,1,56	0/1:9,0:9:0.43:0,0,79	0/1:8,0:8:5.80:12,0,6	0/0:12,0:10:13.08:0,13,50	0/1:6,0:6:7.35:7,0,16	0/0:4,0:3:2.74:0,3,12	0/0:2,0:2:6.02:0,6,72	0/1:9,0:7:10.01:10,0,42	1/1:9,0:9:3.69:16,4,0	1/1:7,0:6:4.66:12,5,0	0/1:25,0:25:10.10:102,0,10	0/0:20,0:19:0.41:0,0,27	0/0:11,0:8:0.58:0,1,3	0/0:8,0:6:2.93:0,3,11	0/1:12,1:12:1.64:2,0,144	0/1:10,0:10:5.58:6,0,104	1/1:8,0:4:6.83:40,7,0
chr10	49717192	.	TCTGAGAGAGGGAGG	T	12917.21	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=11.985;DP=479;FS=45.634;HRun=0;HaplotypeScore=193.4293;InbreedingCoeff=0.9488;MQ=97.47;MQ0=1;MQRankSum=-12.327;QD=88.47;ReadPosRankSum=1.114;VQSLOD=2.7050;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,99,6235	0/0:4,0:4:12.04:0,12,789	0/0:50,0:44:91.96:0,92,4524	0/0:57,0:48:55.43:0,55,3000	1/1:0,8:8:24.08:868,24,0	0/0:17,0:17:51.17:0,51,3264	0/0:20,0:20:57.18:0,57,3705	1/1:0,13:13:38.99:696,39,0	0/0:18,0:18:51.18:0,51,3220	1/1:0,15:16:48.16:2098,48,0	1/1:0,5:5:15.05:568,15,0	0/0:16,0:16:48.16:0,48,3173	0/0:21,0:21:63.22:0,63,3951	1/1:0,17:17:39.13:1629,39,0	0/0:24,0:24:72.25:0,72,4784	0/0:17,0:17:51.18:0,51,3555	1/1:0,10:10:18.06:787,18,0	1/1:0,3:3:3.01:133,3,0	1/1:0,5:5:15:372,15,0	1/1:0,8:8:15.05:568,15,0	1/1:1,21:22:30.08:799,30,0	0/0:7,0:7:21.07:0,21,1283	0/0:13,0:13:39.13:0,39,2395	0/0:32,0:32:93.32:0,93,6508	1/1:1,8:9:24.08:1052,24,0	1/1:0,11:11:33.11:1459,33,0	1/1:0,16:16:39.13:1628,39,0	1/1:0,2:2:6.02:261,6,0
chr10	49717624	.	C	CAA	4734.32	PASS	AB=0.795;AC=46;AF=0.821;AN=56;BaseQRankSum=0.962;DP=525;FS=0.000;HRun=17;HaplotypeScore=125.9899;InbreedingCoeff=0.3826;MQ=73.32;MQ0=2;MQRankSum=-2.388;QD=9.88;ReadPosRankSum=-1.718;VQSLOD=2.3314;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:15,22:41:31.96:118,0,32	0/0:3,0:3:2.70:0,3,16	0/1:39,0:20:8.75:9,0,36	0/0:17,0:12:4.02:0,4,26	1/1:22,0:22:36.79:312,37,0	0/1:5,14:21:22.46:76,0,22	1/1:10,0:15:3.01:31,3,0	1/1:32,0:31:23.96:219,24,0	1/1:6,0:16:5.31:27,5,0	1/1:14,0:19:29.47:254,29,0	1/1:13,0:13:20.84:163,21,0	1/1:17,0:17:35.94:340,36,0	1/1:9,0:9:8.96:77,9,0	1/1:27,0:27:27.89:252,28,0	0/0:12,0:25:9.71:0,10,48	1/1:19,0:18:30.03:297,30,0	1/1:13,0:13:32.98:319,33,0	1/1:5,0:5:12.08:97,12,0	1/1:32,1:32:48:448,48,0	1/1:24,0:24:48.24:422,48,0	0/1:6,0:6:0:0,0,0	1/1:1,2:3:2.94:18,3,0	1/1:9,0:9:4.23:25,4,0	1/1:22,0:22:32.99:329,33,0	1/1:15,0:16:29.33:255,29,0	1/1:25,0:25:41.54:354,42,0	1/1:16,0:16:20.92:194,21,0	1/1:7,0:13:11.72:98,12,0
chr10	49717881	.	TAC	T	3218.75	PASS	AB=0.856;AC=40;AF=0.800;AN=50;BaseQRankSum=5.151;DP=454;FS=0.808;HRun=0;HaplotypeScore=116.7250;InbreedingCoeff=0.4532;MQ=58.78;MQ0=4;MQRankSum=-0.500;QD=9.20;ReadPosRankSum=-0.124;VQSLOD=3.1414;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:24,3:27:57.40:57,0,354	0/0:7,0:7:6:0,6,53	0/0:23,0:14:2.98:0,3,22	./.	1/1:5,14:19:24.05:264,24,0	1/1:6,0:13:8.52:42,9,0	1/1:9,0:11:2.92:17,3,0	1/1:28,0:36:25.79:136,26,0	1/1:4,0:10:2.84:14,3,0	1/1:4,10:14:31.03:343,31,0	0/1:10,3:12:12.62:81,0,13	1/1:6,0:16:19.89:98,20,0	1/1:4,0:9:14.20:70,14,0	1/1:9,6:16:14.76:138,15,0	0/0:19,0:19:8.97:0,9,80	0/0:19,0:19:4.97:0,5,109	1/1:8,17:25:31.29:473,31,0	1/1:4,16:21:44.96:493,45,0	1/1:5,0:12:4.13:58,4,0	1/1:5,0:16:8.52:42,9,0	1/1:21,0:21:2.98:21,3,0	./.	1/1:4,0:7:5.68:28,6,0	./.	1/1:5,9:15:24.04:261,24,0	1/1:8,15:24:45.29:423,45,0	1/1:5,0:12:19.89:98,20,0	1/1:5,6:11:18.05:206,18,0
chr10	49717909	.	C	CAT	776.80	PASS	AB=0.877;AC=21;AF=0.389;AN=54;BaseQRankSum=-4.059;DP=368;FS=0.000;HRun=0;HaplotypeScore=120.9289;InbreedingCoeff=0.3803;MQ=54.17;MQ0=7;MQRankSum=0.597;QD=4.46;ReadPosRankSum=-3.349;VQSLOD=2.1172;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:27:49.73:177,0,50	0/1:1,0:6:18.91:27,0,19	0/0:7,0:4:2.90:0,3,22	./.	0/0:20,0:19:25.71:0,26,142	1/1:13,0:12:18.67:128,19,0	0/1:4,0:4:0:0,0,0	0/1:33,0:32:6.02:6,0,69	1/1:6,0:6:1.25:3,1,0	0/0:14,0:14:27.57:0,28,170	0/0:7,0:7:10:0,10,54	1/1:14,0:13:11.72:48,12,0	1/1:6,0:5:5.51:14,6,0	0/0:8,0:8:6.52:0,7,67	0/1:4,0:13:30.19:103,0,30	1/1:2,15:17:21.07:395,21,0	0/0:27,0:27:51.98:0,52,299	0/0:25,0:25:52.12:0,52,291	0/0:16,0:15:19.73:0,20,128	0/0:14,0:14:8.91:0,9,63	0/0:8,0:7:2.38:0,2,13	1/1:4,0:4:2.97:21,3,0	1/1:3,0:3:2.49:7,2,0	0/1:7,0:7:0:0,0,0	0/0:14,0:14:15.75:0,16,112	0/1:21,0:21:10.33:10,0,103	0/0:14,0:13:27.10:0,27,150	0/0:11,0:11:20.45:0,20,129
chr10	49719342	.	C	CTT	4733.84	PASS	AB=0.903;AC=28;AF=0.500;AN=56;BaseQRankSum=3.433;DP=485;FS=8.516;HRun=1;HaplotypeScore=101.8458;InbreedingCoeff=0.4004;MQ=62.52;MQ0=8;MQRankSum=0.286;QD=15.22;ReadPosRankSum=2.095;VQSLOD=1.6634;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:32,0:32:58.26:571,58,0	1/1:11,0:11:26.69:209,27,0	0/0:23,0:16:39.49:0,39,326	0/0:25,0:15:28.69:0,29,211	1/1:19,1:20:9.02:403,9,0	0/0:14,0:13:11.98:0,12,181	0/0:18,0:17:27.09:0,27,217	1/1:36,0:36:39.11:654,39,0	0/0:13,0:12:20.18:0,20,211	0/1:20,0:19:70.82:304,0,71	0/1:14,0:14:12.21:210,0,12	0/0:14,0:14:26.93:0,27,215	0/0:13,0:12:8.38:0,8,120	0/1:2,0:14:1.58:2,0,30	1/1:14,1:14:0.02:350,0,0	1/1:8,0:8:22.85:175,23,0	0/1:17,12:30:99:149,0,125	0/1:11,0:11:17.43:149,0,17	0/1:13,0:12:80.55:113,0,81	1/1:9,0:9:22.25:191,22,0	1/1:17,0:17:41.68:329,42,0	0/0:15,0:15:32.80:0,33,263	0/0:13,0:13:32.90:0,33,270	0/0:26,0:23:43.26:0,43,338	1/1:15,0:13:34.67:294,35,0	0/1:24,0:24:7.38:421,0,7	0/1:17,0:17:49.04:159,0,49	1/1:4,0:4:5.99:50,6,0
chr10	49720423	.	AGAGAGAG	A	1828.98	PASS	AB=1.000;AC=20;AF=0.357;AN=56;BaseQRankSum=7.742;DP=512;FS=4.457;HRun=0;HaplotypeScore=109.4444;InbreedingCoeff=0.7813;MQ=59.40;MQ0=59;MQRankSum=-7.896;QD=12.11;ReadPosRankSum=-1.364;VQSLOD=2.1952;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:20:40.01:0,40,495	0/0:6,0:6:9.03:0,9,114	0/0:64,0:18:42.22:0,42,496	0/0:75,0:26:56.59:0,57,582	1/1:12,0:6:11.91:100,12,0	0/0:11,0:10:24.08:0,24,302	0/0:25,0:24:56.87:0,57,623	0/0:21,0:17:51.12:0,51,623	0/0:9,0:7:18.02:0,18,210	1/1:17,0:10:27.03:339,27,0	1/1:14,0:5:2.68:19,3,0	0/0:11,0:9:24.08:0,24,302	0/0:15,0:13:27.38:0,27,322	1/1:4,5:7:9.03:164,9,0	0/1:10,0:10:51.82:52,0,237	0/0:20,0:20:30.28:0,30,548	1/1:13,1:10:24.04:396,24,0	1/1:15,0:13:24.04:316,24,0	0/0:13,0:9:27.08:0,27,324	0/0:15,0:13:30.09:0,30,368	0/0:16,0:14:24.06:0,24,289	0/0:6,0:6:18.06:0,18,226	0/0:15,0:15:27.09:0,27,340	0/0:16,0:14:15.93:0,16,313	1/1:20,0:14:17.77:161,18,0	1/1:16,0:9:27.09:356,27,0	0/1:16,0:13:11.29:11,0,278	1/1:6,0:5:9.03:120,9,0
chr10	49720429	.	AG	A	1549.79	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=7.020;DP=517;FS=8.461;HRun=1;HaplotypeScore=82.9154;InbreedingCoeff=0.9368;MQ=63.08;MQ0=57;MQRankSum=-8.449;QD=12.30;ReadPosRankSum=-2.696;VQSLOD=0.7525;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:20:39.09:0,39,474	0/0:7,0:7:12.04:0,12,151	0/0:71,0:24:61.34:0,61,707	0/0:80,0:29:65.54:0,66,691	1/1:4,8:6:11.91:99,12,0	0/0:12,0:11:27.09:0,27,340	0/0:19,0:18:48.15:0,48,603	0/0:23,0:19:57.10:0,57,684	0/0:8,0:8:21.07:0,21,264	1/1:5,12:10:27.09:351,27,0	1/1:8,7:6:2.88:19,3,0	0/0:11,0:9:24.08:0,24,302	0/0:12,0:11:21.47:0,21,254	1/1:6,3:7:9.01:104,9,0	0/0:11,0:11:25.85:0,26,306	0/0:20,0:20:44.88:0,45,565	1/1:12,4:10:23.79:240,24,0	1/1:11,4:13:24.03:290,24,0	0/0:12,0:8:24.08:0,24,298	0/0:14,0:12:26.29:0,26,329	0/0:15,0:13:20.47:0,20,263	0/0:6,0:6:18.06:0,18,226	0/0:16,0:16:29.63:0,30,375	0/0:15,0:13:27.14:0,27,339	1/1:3,17:15:20.86:181,21,0	1/1:3,13:9:27.08:350,27,0	0/0:16,0:13:26.21:0,26,306	1/1:0,6:5:9.03:120,9,0
chr10	49720430	.	G	GA	1578.80	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=7.402;DP=536;FS=11.476;HRun=1;HaplotypeScore=90.2110;InbreedingCoeff=0.9360;MQ=62.68;MQ0=57;MQRankSum=-8.579;QD=11.61;ReadPosRankSum=-3.780;VQSLOD=0.0371;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:20:31.86:0,32,451	0/0:7,0:7:11.73:0,12,152	0/0:71,0:24:61.72:0,62,703	0/0:82,0:31:55.16:0,55,658	1/1:9,4:7:11.91:103,12,0	0/0:12,0:11:26.87:0,27,343	0/0:20,0:19:48.15:0,48,610	0/0:24,0:20:55.41:0,55,675	0/0:9,0:9:21.07:0,21,267	1/1:16,3:12:33.07:411,33,0	1/1:8,7:6:2.97:20,3,0	0/0:11,0:9:24.08:0,24,305	0/0:12,0:11:20.95:0,21,241	1/1:9,0:7:8.62:90,9,0	0/0:12,0:12:29.88:0,30,337	0/0:20,0:20:45.21:0,45,572	1/1:10,6:10:19.40:198,19,0	1/1:4,10:13:24.03:290,24,0	0/0:12,0:8:24.03:0,24,287	0/0:15,0:13:26.13:0,26,317	0/0:16,0:14:20.47:0,20,266	0/0:6,0:6:18.06:0,18,229	0/0:16,0:16:29.64:0,30,379	0/0:15,0:13:27.09:0,27,343	1/1:22,2:18:23.83:201,24,0	1/1:17,2:12:27.08:350,27,0	0/0:17,0:14:27.45:0,27,322	1/1:6,0:5:9.03:120,9,0
chr10	49720485	.	CTCTTTT	C	10115.40	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-0.605;DP=378;FS=1.404;HRun=0;HaplotypeScore=100.4702;InbreedingCoeff=0.9724;MQ=56.06;MQ0=9;MQRankSum=-11.043;QD=49.59;ReadPosRankSum=1.997;VQSLOD=4.8520;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:15:42.13:0,42,730	0/0:9,0:9:21.06:0,21,331	0/0:12,0:7:20.93:0,21,397	0/0:12,0:8:8.81:0,9,245	1/1:3,15:15:29.96:668,30,0	0/0:17,0:17:45.10:0,45,675	0/0:20,0:19:45.01:0,45,589	1/1:1,14:14:42.07:649,42,0	0/0:11,0:11:30.08:0,30,488	1/1:5,17:18:51.15:1173,51,0	1/1:1,12:12:33.05:741,33,0	0/0:9,0:9:21.54:0,22,373	0/0:8,0:8:18.06:0,18,315	1/1:3,5:8:15.05:361,15,0	0/0:20,0:20:48:0,48,770	0/0:13,0:13:36.05:0,36,619	1/1:2,7:8:17.97:329,18,0	1/1:3,10:12:27.08:653,27,0	1/1:0,13:14:42.07:627,42,0	1/1:0,15:15:30.05:723,30,0	1/1:0,8:7:9.03:217,9,0	0/0:5,0:5:15.04:0,15,233	0/0:14,0:14:38.32:0,38,592	0/0:8,0:7:21.07:0,21,409	1/1:6,32:33:93.27:2142,93,0	1/1:3,13:15:45.11:963,45,0	1/1:0,8:8:18.06:434,18,0	1/1:1,6:7:18.06:436,18,0
chr10	49720487	.	CTT	C	4060.21	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-0.017;DP=376;FS=7.797;HRun=13;HaplotypeScore=99.1301;InbreedingCoeff=0.7832;MQ=55.98;MQ0=10;MQRankSum=-2.942;QD=11.94;ReadPosRankSum=1.845;VQSLOD=2.3633;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,13:15:33.01:320,33,0	1/1:1,8:9:17.82:174,18,0	0/0:11,0:6:8.98:0,9,103	0/0:12,0:8:2.59:0,3,24	1/1:18,0:15:25.17:121,25,0	1/1:5,12:17:30:285,30,0	1/1:10,10:19:20.72:186,21,0	1/1:15,0:14:16.78:80,17,0	1/1:2,9:11:20.99:204,21,0	1/1:20,0:18:44.80:213,45,0	1/1:12,0:12:27.97:133,28,0	1/1:1,8:9:18.01:174,18,0	1/1:2,6:8:11.93:105,12,0	1/1:7,0:7:13.99:67,14,0	1/1:2,18:20:42:396,42,0	0/0:6,0:13:12.48:0,12,43	1/1:9,0:8:11.17:54,11,0	1/1:13,0:11:25.21:121,25,0	1/1:14,0:14:16.87:81,17,0	1/1:15,0:15:27.95:134,28,0	1/1:8,0:7:8.39:40,8,0	1/1:2,4:6:9:87,9,0	1/1:3,11:14:25.70:250,26,0	1/1:2,5:7:8.93:137,9,0	1/1:37,0:33:79.27:377,79,0	1/1:16,0:15:33.57:161,34,0	1/1:8,0:8:16.79:80,17,0	1/1:8,0:7:16.79:81,17,0
chr10	49721708	.	T	TCA	15345.34	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-19.243;DP=760;FS=0.281;HRun=0;HaplotypeScore=79.8702;InbreedingCoeff=0.9921;MQ=89.35;MQ0=4;MQRankSum=-3.839;QD=42.27;ReadPosRankSum=1.768;VQSLOD=6.7017;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,138,1918	0/0:13,0:13:39.13:0,39,558	0/0:27,0:27:66.07:0,66,884	0/0:29,0:29:72.15:0,72,946	1/1:4,18:24:48.15:840,48,0	0/0:25,0:25:75.23:0,75,1052	0/0:27,0:27:78.25:0,78,1096	1/1:1,33:35:99:1819,102,0	0/0:40,0:40:99:0,117,1616	1/1:2,21:22:60.21:1079,60,0	1/1:3,26:30:54.19:989,54,0	0/0:27,0:27:75.25:0,75,1075	0/0:23,0:23:69.22:0,69,960	1/1:3,29:31:66.23:1209,66,0	0/0:31,0:31:90.30:0,90,1275	0/0:29,0:29:84.28:0,84,1200	1/1:0,33:34:84.29:1539,84,0	1/1:0,27:28:57.20:1045,57,0	1/1:4,17:21:54.16:936,54,0	1/1:5,22:27:63.22:1142,63,0	1/1:2,23:24:54.19:990,54,0	0/0:25,0:25:75.24:0,75,1056	0/0:22,0:22:63.14:0,63,839	0/0:31,0:31:93.21:0,93,1256	1/1:1,18:19:51.17:935,51,0	1/1:0,26:28:78.25:1397,78,0	1/1:3,30:32:69.24:1260,69,0	1/1:1,3:4:9.03:165,9,0
chr10	49722112	.	ATTTT	A	10961.36	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=8.848;DP=596;FS=12.890;HRun=13;HaplotypeScore=108.7874;InbreedingCoeff=0.9949;MQ=67.55;MQ0=2;MQRankSum=-4.438;QD=32.82;ReadPosRankSum=5.746;VQSLOD=2.3300;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:36:93.28:0,93,1872	0/0:5,0:6:18.05:0,18,351	0/0:16,0:12:29.84:0,30,468	0/0:11,0:10:13.23:0,13,115	1/1:2,16:18:36.09:527,36,0	0/0:15,0:16:45.15:0,45,981	0/0:21,0:22:54.18:0,54,1175	1/1:4,19:23:57.09:811,57,0	0/0:16,0:17:45.14:0,45,907	1/1:3,35:39:99:1532,108,0	1/1:4,23:27:48.16:740,48,0	0/0:13,0:14:36.12:0,36,757	0/0:18,0:18:45.14:0,45,882	1/1:0,20:20:51.17:745,51,0	0/0:25,0:28:72.22:0,72,1552	0/0:4,0:17:42.05:0,42,519	1/1:4,23:30:68.34:952,68,0	1/1:1,19:20:48.62:703,49,0	1/1:4,16:20:49.93:661,50,0	1/1:2,25:27:53.94:763,54,0	1/1:3,20:23:45.08:657,45,0	0/0:16,0:21:63.07:0,63,1234	0/0:16,0:21:48.05:0,48,825	0/0:14,0:19:51.08:0,51,1021	1/1:6,11:17:30.05:439,30,0	1/1:3,26:28:75.19:1075,75,0	1/1:3,27:30:72.19:1052,72,0	1/1:4,7:11:21.02:307,21,0
chr10	49722424	.	TCCAAGGTTGACGTTATAAG	T	2628.97	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.991;DP=559;FS=0.917;HRun=0;HaplotypeScore=273.9977;InbreedingCoeff=0.9909;MQ=93.01;MQ0=0;MQRankSum=-6.362;QD=101.11;ReadPosRankSum=1.744;VQSLOD=3.0105;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,132,11223	1/1:1,6:7:15.05:808,15,0	0/0:30,0:30:83.52:0,84,5418	0/0:21,0:21:54.07:0,54,2891	0/0:20,0:20:51.18:0,51,4272	0/0:16,0:16:45.15:0,45,3736	0/0:36,0:36:99:0,105,8022	0/0:21,0:21:63.22:0,63,5112	0/0:15,0:15:39.11:0,39,2969	0/0:12,0:12:36.12:0,36,3087	0/0:15,0:15:45.15:0,45,3515	0/0:18,0:18:54.19:0,54,4313	0/0:16,0:16:48.16:0,48,3890	0/0:19,0:19:54.17:0,54,4423	1/1:3,16:19:35.65:1939,36,0	0/0:16,0:16:45.15:0,45,3603	0/0:28,0:28:84.29:0,84,7428	0/0:12,0:12:33.11:0,33,2976	0/0:15,0:15:42.14:0,42,2697	0/0:29,0:29:87.30:0,87,7132	0/0:27,0:27:75.72:0,76,6138	0/0:9,0:9:27.09:0,27,2458	0/0:14,0:14:42.14:0,42,3452	0/0:17,0:17:48.16:0,48,4184	0/0:18,0:18:54.19:0,54,4408	0/0:27,0:27:81.28:0,81,6562	0/0:20,0:20:60.21:0,60,4834	0/0:15,0:15:45.15:0,45,3670
chr10	49723045	.	G	GGC	10720.08	PASS	AB=0.591;AC=45;AF=0.804;AN=56;BaseQRankSum=14.613;DP=438;FS=2.307;HRun=0;HaplotypeScore=208.5361;InbreedingCoeff=0.6297;MQ=81.03;MQ0=0;MQRankSum=-14.664;QD=32.39;ReadPosRankSum=6.218;VQSLOD=5.5526;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,135,2151	1/1:0,8:8:24.08:320,24,0	0/0:29,0:27:73.28:0,73,1044	0/0:16,0:16:36.12:0,36,520	1/1:1,10:11:15.63:296,16,0	1/1:2,13:15:45.13:596,45,0	1/1:4,10:14:9.31:405,9,0	0/1:5,10:15:22.91:408,0,23	1/1:2,18:20:11.25:700,11,0	1/1:1,12:14:36.05:490,36,0	1/1:3,9:13:1.67:361,2,0	0/1:8,14:22:0.95:621,0,1	1/1:4,18:23:55.12:767,55,0	1/1:3,18:21:51.15:671,51,0	1/1:4,21:25:66.22:895,66,0	0/0:16,0:16:48.15:0,48,756	1/1:3,10:13:5.71:337,6,0	1/1:2,7:9:11.91:279,12,0	1/1:1,5:6:11.91:207,12,0	1/1:1,22:23:55.68:858,56,0	0/1:2,7:9:2.06:145,0,2	1/1:0,9:9:24.08:321,24,0	1/1:2,9:12:30.06:362,30,0	1/1:2,6:8:14.49:141,14,0	1/1:1,12:13:25.97:470,26,0	1/1:1,10:11:32.78:431,33,0	1/1:1,14:15:32.94:558,33,0	1/1:0,2:2:6.02:83,6,0
chr10	49723046	.	A	ACCACAGT	35259.96	PASS	AB=0.595;AC=47;AF=0.839;AN=56;BaseQRankSum=11.323;DP=542;FS=1.330;HRun=0;HaplotypeScore=224.1295;InbreedingCoeff=0.8482;MQ=74.81;MQ0=0;MQRankSum=-14.248;QD=81.62;ReadPosRankSum=1.919;VQSLOD=5.3273;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,135,3526	1/1:2,8:10:30.10:945,30,0	0/0:29,0:27:71.51:0,72,1525	0/0:17,0:17:35.81:0,36,852	1/1:3,10:13:27.09:853,27,0	1/1:2,13:15:44.98:1441,45,0	1/1:12,10:22:45.58:1651,46,0	1/1:10,10:20:57.18:1676,57,0	0/1:8,17:25:8.63:2247,0,9	1/1:3,13:16:45.15:1479,45,0	1/1:5,9:15:42.13:1271,42,0	1/1:12,14:26:75.26:2403,75,0	1/1:9,17:27:75.26:2430,75,0	1/1:11,18:29:78.25:2430,78,0	1/1:8,21:29:78.16:2457,78,0	0/0:16,0:16:48.15:0,48,1221	1/1:7,10:17:42.03:1295,42,0	1/1:4,7:11:30.06:895,30,0	1/1:6,5:11:33.11:1063,33,0	1/1:8,22:30:81.28:2711,81,0	1/1:12,7:19:24.08:709,24,0	1/1:4,9:13:27.09:904,27,0	1/1:5,10:15:18.33:754,18,0	1/1:5,6:11:12.04:381,12,0	1/1:5,12:17:48.16:1543,48,0	1/1:6,10:18:51.10:1539,51,0	1/1:7,14:21:63.22:1975,63,0	1/1:0,2:2:6.02:206,6,0
chr10	49723947	.	A	ATTTT	945.09	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-2.422;DP=613;FS=0.957;HRun=5;HaplotypeScore=116.0790;InbreedingCoeff=0.9986;MQ=84.52;MQ0=0;MQRankSum=-3.834;QD=41.09;ReadPosRankSum=1.004;VQSLOD=1.0306;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,19:23:45.11:1040,45,0	0/0:11,0:11:30.06:0,30,450	0/0:27,0:27:53.27:0,53,833	0/0:13,0:13:33.09:0,33,525	0/0:20,0:20:60.16:0,60,947	0/0:26,0:26:78.20:0,78,1197	0/0:28,0:28:78.16:0,78,1150	0/0:40,0:40:99:0,108,1711	0/0:25,0:25:69.20:0,69,1099	0/0:21,0:21:60.18:0,60,952	0/0:20,0:20:54.13:0,54,849	0/0:13,0:13:33.09:0,33,522	0/0:22,0:22:60.18:0,60,979	0/0:14,0:14:42.09:0,42,598	0/0:15,0:15:45.15:0,45,753	0/0:25,0:25:72.19:0,72,1126	0/0:30,0:30:87.25:0,87,1395	0/0:22,0:22:63.19:0,63,1028	0/0:26,0:26:60.07:0,60,855	0/0:21,0:21:60.14:0,60,920	0/0:17,0:17:48.12:0,48,749	0/0:24,0:24:66.22:0,66,1104	0/0:20,0:20:57.16:0,57,895	0/0:16,0:16:45.15:0,45,753	0/0:21,0:21:51.16:0,51,853	0/0:32,0:32:93.31:0,93,1531	0/0:30,0:30:87.23:0,87,1353	0/0:11,0:11:33.11:0,33,552
chr10	49724137	.	ACTT	A	12728	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=16.545;DP=649;FS=10.060;HRun=0;HaplotypeScore=102.4384;InbreedingCoeff=0.9896;MQ=73.05;MQ0=1;MQRankSum=-3.567;QD=42.86;ReadPosRankSum=2.237;VQSLOD=6.1552;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:90.26:0,90,1865	0/0:8,0:8:24.08:0,24,544	0/0:27,0:24:59.53:0,60,1121	0/0:19,0:18:8.06:0,8,900	1/1:0,23:23:63.21:1002,63,0	0/0:21,0:21:60.21:0,60,1297	0/0:32,0:32:93.31:0,93,2034	1/1:0,20:20:60.18:942,60,0	0/0:30,0:30:87.30:0,87,1930	1/1:0,26:26:78.25:1271,78,0	1/1:1,30:31:87.18:1338,87,0	0/0:28,0:28:81.28:0,81,1768	0/0:25,0:25:72.25:0,72,1606	1/1:0,23:23:51.17:828,51,0	0/0:30,0:30:87.30:0,87,1970	0/0:29,0:29:81.26:0,81,1792	1/1:2,22:24:48.16:798,48,0	1/1:1,20:21:54.18:899,54,0	1/1:1,17:18:51.17:839,51,0	1/1:1,24:25:69.18:1118,69,0	1/1:0,13:13:27.09:427,27,0	0/0:11,0:11:33.11:0,33,721	0/0:25,0:25:72.23:0,72,1587	0/0:35,0:35:99:0,99,2137	1/1:0,15:15:42.14:689,42,0	1/1:0,26:26:75.26:1246,75,0	1/1:1,22:23:57.19:939,57,0	1/1:0,9:9:24.08:391,24,0
chr10	49724246	.	TTGTGTGTG	T	1249.16	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=2.844;DP=575;FS=4.005;HRun=0;HaplotypeScore=163.8922;InbreedingCoeff=0.7313;MQ=71.19;MQ0=16;MQRankSum=-4.354;QD=8.99;ReadPosRankSum=0.477;VQSLOD=2.3719;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:25:28.27:0,28,449	1/1:9,0:9:6.02:117,6,0	0/0:45,0:22:6.02:0,6,112	0/0:59,0:24:6.02:0,6,103	0/0:26,0:25:33.11:0,33,725	0/0:16,0:16:9.01:0,9,96	0/0:26,0:28:19.29:0,19,259	1/1:13,0:12:5.32:56,5,0	0/0:13,0:14:3.60:0,4,129	0/0:17,0:17:17.27:0,17,361	0/0:7,0:7:6.02:0,6,126	0/0:14,0:13:6.02:0,6,73	0/0:20,0:20:11.24:0,11,114	0/0:20,0:19:9.03:0,9,239	1/1:27,0:25:14.84:246,15,0	1/1:8,0:13:8.97:167,9,0	0/0:21,0:21:36.10:0,36,832	0/0:17,0:17:32.32:0,32,736	1/1:11,1:11:3.01:75,3,0	1/1:8,3:14:9.03:187,9,0	1/1:30,0:30:8.98:73,9,0	0/0:14,0:14:9.01:0,9,104	0/0:16,0:16:2.86:0,3,35	0/0:38,0:38:29.22:0,29,360	0/0:12,0:11:9.92:0,10,287	0/0:22,0:21:37.34:0,37,965	1/1:13,6:20:21.04:506,21,0	0/0:5,0:5:12.04:0,12,352
chr10	49724281	.	TGTGTGTGTGC	T	1389.39	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=0.711;DP=520;FS=3.522;HRun=0;HaplotypeScore=140.6311;InbreedingCoeff=-0.1094;MQ=56.86;MQ0=14;MQRankSum=-2.866;QD=5.84;ReadPosRankSum=0.509;VQSLOD=2.6973;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:30:83.63:84,0,623	1/1:0,5:5:6.02:200,6,0	0/0:8,0:3:2.08:0,2,106	0/0:11,0:4:8.76:0,9,115	0/1:22,0:22:42.58:43,0,933	0/0:22,0:22:9.90:0,10,103	0/0:32,0:32:19.48:0,19,300	0/1:14,0:12:31.84:32,0,157	0/1:18,0:18:88.74:89,0,217	0/1:16,0:16:67.14:67,0,570	0/0:12,0:12:6.02:0,6,147	0/0:25,0:24:6.90:0,7,77	0/0:24,0:24:8.32:0,8,128	0/0:20,0:19:9.03:0,9,244	1/1:4,21:23:18.02:474,18,0	0/1:18,0:17:99:138,0,169	0/0:21,0:21:33.61:0,34,846	0/0:20,0:20:32.32:0,32,796	0/1:5,0:4:11.12:11,0,77	0/1:14,0:13:95.31:111,0,95	0/1:29,0:27:36.83:37,0,146	0/0:17,0:17:10.28:0,10,150	0/0:11,0:11:3.48:0,3,39	0/0:40,0:40:29.22:0,29,375	0/0:13,0:12:9.03:0,9,293	0/1:24,0:23:96.86:97,0,962	0/1:18,0:17:75.93:168,0,76	0/0:6,0:5:15.04:0,15,401
chr10	49724285	.	TGTGTGC	T	2070.36	PASS	AB=0.996;AC=32;AF=0.571;AN=56;BaseQRankSum=3.988;DP=494;FS=9.414;HRun=0;HaplotypeScore=113.8586;InbreedingCoeff=0.1547;MQ=60.50;MQ0=13;MQRankSum=0.049;QD=5.27;ReadPosRankSum=3.370;VQSLOD=1.3865;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:25:2.72:220,0,3	1/1:5,0:5:6.02:105,6,0	1/1:3,0:2:4.07:12,4,0	0/0:5,0:3:2.74:0,3,12	0/1:21,1:22:99:154,0,171	1/1:20,1:21:4.80:28,5,0	1/1:30,0:30:5.08:146,5,0	0/0:11,0:9:26.42:0,26,185	1/1:18,2:20:19.09:355,19,0	0/1:14,0:14:99:167,0,124	0/0:12,0:12:3:0,3,29	1/1:25,0:24:5.71:29,6,0	1/1:22,1:23:5.72:69,6,0	0/0:19,0:18:9.01:0,9,87	1/1:24,0:22:17.95:249,18,0	0/1:19,0:18:51.88:52,0,187	0/0:19,0:19:25.88:0,26,258	0/1:20,0:20:1.80:2,0,235	0/1:10,0:9:3.70:4,0,136	0/1:12,0:12:61.65:63,0,62	0/0:22,0:20:26.66:0,27,182	1/1:17,0:17:5.38:38,5,0	1/1:13,0:13:1.98:14,2,0	1/1:39,1:40:28.48:150,28,0	0/0:13,0:12:9.01:0,9,121	0/1:25,0:24:99:227,0,326	0/1:17,0:16:88.91:151,0,89	0/1:7,0:6:9.09:9,0,141
chr10	49724287	.	TGTGC	T	3611.12	PASS	AB=0.937;AC=33;AF=0.589;AN=56;BaseQRankSum=2.099;DP=490;FS=9.308;HRun=0;HaplotypeScore=99.0888;InbreedingCoeff=0.1635;MQ=63.91;MQ0=13;MQRankSum=-1.808;QD=9.10;ReadPosRankSum=3.040;VQSLOD=1.8781;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:25:54.41:547,54,0	1/1:5,0:5:6.02:77,6,0	0/1:6,0:4:4.75:5,0,22	0/0:6,0:4:2.74:0,3,12	1/1:21,0:21:27.09:320,27,0	1/1:4,17:21:5.70:118,6,0	1/1:2,25:27:12.51:170,13,0	0/0:12,0:10:29.47:0,29,212	1/1:20,0:20:44.19:423,44,0	0/1:13,1:14:6.83:268,0,7	0/0:12,0:12:1.25:0,1,3	1/1:3,22:24:6.02:119,6,0	1/1:2,20:22:5.77:82,6,0	0/0:17,0:16:3.74:0,4,8	1/1:24,0:22:17.95:192,18,0	0/1:19,0:18:11.23:11,0,188	0/1:21,0:21:10.07:31,0,10	0/1:16,2:18:59.41:122,0,59	0/0:10,0:9:10.15:0,10,146	0/1:12,0:12:18.96:19,0,76	0/0:23,0:21:29.61:0,30,201	1/1:0,15:15:2.95:58,3,0	1/1:0,13:13:2.60:59,3,0	1/1:1,39:40:29.97:598,30,0	0/0:13,0:12:4.24:0,4,28	0/1:8,17:24:99:284,0,126	0/1:17,0:16:54.99:55,0,91	0/1:7,0:6:49.94:50,0,51
chr10	49724289	.	TGC	T	3467.50	PASS	AB=1.000;AC=40;AF=0.714;AN=56;BaseQRankSum=4.887;DP=486;FS=8.055;HRun=0;HaplotypeScore=91.7790;InbreedingCoeff=0.6326;MQ=65.19;MQ0=11;MQRankSum=0.691;QD=9.05;ReadPosRankSum=2.434;VQSLOD=2.8464;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:25:43.36:299,43,0	1/1:5,0:5:5.99:49,6,0	0/1:5,0:4:5.05:5,0,22	0/0:6,0:5:2.74:0,3,12	1/1:13,7:21:59.29:568,59,0	1/1:21,0:21:6:54,6,0	1/1:27,0:27:12.30:89,12,0	0/0:13,0:11:32.44:0,32,232	1/1:20,0:20:47.32:355,47,0	1/1:14,0:14:38.92:353,39,0	1/1:0,12:12:3.01:42,3,0	1/1:24,0:24:6:54,6,0	1/1:22,0:22:5.37:36,5,0	1/1:1,15:15:9.03:126,9,0	1/1:24,0:22:17.88:137,18,0	0/0:19,0:18:15.72:0,16,219	1/1:2,18:20:30.31:390,30,0	1/1:6,11:17:12.02:137,12,0	0/0:11,0:10:25.11:0,25,187	0/0:13,0:13:16.76:0,17,119	0/0:24,0:22:29.61:0,30,200	1/1:15,0:15:2.87:26,3,0	1/1:13,0:13:2.17:26,2,0	1/1:40,0:40:30.02:271,30,0	1/1:3,9:11:3.01:42,3,0	1/1:23,0:22:44.75:353,45,0	0/0:17,0:16:18.61:0,19,133	0/1:7,0:6:9.06:56,0,9
chr10	49725214	.	A	AGT	5509.80	PASS	AB=0.686;AC=35;AF=0.648;AN=54;BaseQRankSum=0.191;DP=872;FS=4.148;HRun=0;HaplotypeScore=165.3974;InbreedingCoeff=0.3212;MQ=63.21;MQ0=18;MQRankSum=-2.741;QD=8.53;ReadPosRankSum=-1.198;VQSLOD=4.5558;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:40:63.01:0,63,707	0/0:8,0:9:17.85:0,18,174	./.	0/0:49,0:27:16.63:0,17,170	1/1:28,0:29:25.63:142,26,0	0/1:7,13:20:10.73:304,0,11	0/1:10,20:31:6.69:520,0,7	1/1:39,0:35:25.58:130,26,0	0/1:21,25:47:99:795,0,102	1/1:35,0:32:30.44:141,30,0	1/1:27,0:26:15.12:66,15,0	0/1:13,25:39:0.40:586,0,0	0/1:13,15:28:36.50:388,0,37	1/1:14,0:33:8.45:84,8,0	0/0:41,0:41:63.13:0,63,693	0/0:13,0:38:23.35:0,23,198	1/1:19,0:20:10.34:106,10,0	1/1:12,0:12:8.24:31,8,0	1/1:15,0:14:6.53:74,7,0	1/1:29,0:32:25.48:243,25,0	0/1:36,0:35:1.89:2,0,3	0/1:23,5:28:64.19:297,0,64	0/1:7,9:16:7.17:260,0,7	0/1:18,32:52:52.13:907,0,52	1/1:27,0:28:11.42:94,11,0	1/1:33,0:25:13.08:66,13,0	1/1:17,0:19:24.35:189,24,0	1/1:9,0:10:15.20:84,15,0
chr10	49725272	.	GTGTGTGTGT	G	10244.74	PASS	AB=0.772;AC=22;AF=0.393;AN=56;BaseQRankSum=13.464;DP=855;FS=12.381;HRun=0;HaplotypeScore=253.1429;InbreedingCoeff=0.6218;MQ=47.49;MQ0=39;MQRankSum=-15.174;QD=31.92;ReadPosRankSum=-0.760;VQSLOD=2.5182;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:93.79:0,94,3850	0/0:8,0:8:15.05:0,15,693	0/0:71,0:11:17.93:0,18,394	0/0:85,0:12:8.62:0,9,207	1/1:10,13:21:13.30:313,13,0	0/0:17,0:17:33.11:0,33,1262	0/0:34,0:34:69.24:0,69,2676	0/1:18,17:31:99:778,0,103	0/0:42,0:42:86.54:0,87,3677	0/1:17,14:26:1.30:1422,0,1	1/1:11,15:24:41.11:933,41,0	0/0:29,0:28:64.10:0,64,2650	0/0:22,0:22:39.13:0,39,1698	1/1:10,13:22:36.08:910,36,0	0/0:39,0:39:93.32:0,93,4074	0/0:26,0:25:39.13:0,39,1556	0/1:8,2:9:6.16:230,0,6	0/1:7,2:6:0.72:245,0,1	0/1:18,5:16:79.71:484,0,80	1/1:15,10:22:35.97:790,36,0	0/1:26,3:24:67.53:116,0,68	0/0:33,0:33:84.29:0,84,3439	0/0:18,0:18:42.14:0,42,1843	0/0:68,0:68:99:0,142,5666	1/1:5,16:20:36.12:1015,36,0	1/1:9,14:17:42.14:1175,42,0	1/1:9,18:27:48.16:1335,48,0	1/1:4,5:9:23.04:499,23,0
chr10	49725280	.	GT	G	1237.25	PASS	AB=0.923;AC=17;AF=0.304;AN=56;BaseQRankSum=15.489;DP=843;FS=0.772;HRun=2;HaplotypeScore=194.7829;InbreedingCoeff=-0.1400;MQ=50.14;MQ0=40;MQRankSum=-13.711;QD=3.31;ReadPosRankSum=0.317;VQSLOD=0.0197;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,114,1648	0/0:5,0:5:15.05:0,15,225	0/1:73,1:15:9.94:10,0,319	0/0:81,1:11:15.19:0,15,172	0/1:19,2:19:70.74:71,0,151	0/0:17,0:17:42.14:0,42,614	0/0:35,0:35:90.22:0,90,1238	0/1:31,0:26:99:172,0,246	0/0:43,0:43:99:0,110,1549	0/1:29,3:27:99:137,0,198	0/1:23,3:24:67.76:68,0,83	0/0:30,0:29:79.15:0,79,1140	0/0:21,0:21:57.19:0,57,823	0/1:19,0:18:62.40:162,0,62	0/0:44,0:44:99:0,111,1604	0/0:24,0:23:60.19:0,60,849	0/1:9,1:8:29.61:30,0,92	1/1:6,1:4:8.90:53,9,0	0/1:17,1:11:25.58:26,0,124	0/1:19,4:21:99:173,0,139	0/1:25,3:22:48.09:48,0,183	0/0:36,0:36:96.28:0,96,1408	0/0:21,0:21:54.17:0,54,788	0/0:68,0:68:99:0,162,2363	0/1:18,3:20:99:100,0,169	1/1:23,4:21:4.75:212,5,0	0/1:24,3:25:68.81:69,0,205	0/1:8,1:9:19.88:73,0,20
chr10	49725281	.	TTG	T	1823.43	PASS	AB=1.000;AC=22;AF=0.393;AN=56;BaseQRankSum=15.780;DP=870;FS=15.597;HRun=0;HaplotypeScore=215.2865;InbreedingCoeff=0.5436;MQ=49.52;MQ0=40;MQRankSum=-14.767;QD=5.58;ReadPosRankSum=-0.269;VQSLOD=1.8530;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,103,1728	0/0:5,0:5:15.05:0,15,260	0/0:75,1:15:19.02:0,19,376	0/0:84,0:11:8.75:0,9,128	1/1:22,1:21:10.50:59,10,0	0/0:17,0:17:39.13:0,39,655	0/0:35,0:35:90.30:0,90,1444	0/1:35,0:29:99:105,0,195	0/0:43,0:43:76.31:0,76,1742	0/1:33,0:28:38.21:254,0,38	1/1:24,3:25:41.15:259,41,0	0/0:30,0:29:75.16:0,75,1238	0/0:21,0:21:48.16:0,48,817	1/1:22,0:21:31.65:188,32,0	0/0:44,0:44:99:0,105,1780	0/0:24,0:23:54.18:0,54,915	1/1:10,1:8:2.38:50,2,0	0/1:6,0:5:0.96:31,0,1	0/1:18,0:11:55.91:65,0,56	1/1:25,1:25:31.19:183,31,0	0/1:30,0:27:49.66:50,0,57	0/0:34,0:34:96.80:0,97,1617	0/0:20,0:20:54.18:0,54,902	0/0:68,0:68:99:0,151,2529	1/1:22,0:21:34.53:196,35,0	0/1:32,0:26:8.90:200,0,9	1/1:28,0:26:45.57:275,46,0	1/1:8,0:9:11.59:109,12,0
chr10	49725289	.	GT	G	60.70	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=14.780;DP=856;FS=3.584;HRun=2;HaplotypeScore=214.8754;InbreedingCoeff=0.2570;MQ=50.48;MQ0=34;MQRankSum=-12.216;QD=0.46;ReadPosRankSum=5.942;VQSLOD=-0.3560;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,108,1573	0/0:5,0:5:15.05:0,15,225	0/0:75,0:16:9.44:0,9,355	0/0:78,0:11:12.49:0,12,159	0/0:20,1:20:8.10:0,8,73	0/0:15,0:15:36.12:0,36,540	0/0:35,0:35:99:0,99,1440	0/0:33,0:30:53.78:0,54,657	0/0:45,0:45:99:0,115,1729	0/1:26,0:25:14.32:14,0,162	0/1:29,0:27:14.88:15,0,21	0/0:37,1:37:99:0,100,1427	0/0:23,0:23:66.20:0,66,943	0/0:22,0:22:2.33:0,2,111	0/0:44,0:44:99:0,105,1573	0/0:25,0:24:63.20:0,63,910	0/1:10,0:7:18.97:19,0,28	1/1:8,1:6:10.64:68,11,0	0/0:16,0:10:1.84:0,2,130	0/0:22,0:22:5.33:0,5,144	0/0:26,5:27:20.48:0,20,197	0/0:35,0:35:99:0,105,1534	0/0:23,0:23:60.20:0,60,884	0/0:65,0:66:99:0,149,2241	0/1:23,0:23:2.50:3,0,89	0/0:31,0:29:12.08:0,12,480	0/1:27,0:26:12.48:12,0,108	1/1:7,1:8:13.77:69,14,0
chr10	49725312	.	A	AGT	10909.88	PASS	AB=0.743;AC=26;AF=0.464;AN=56;BaseQRankSum=16.891;DP=946;FS=3.051;HRun=0;HaplotypeScore=222.7557;InbreedingCoeff=0.8341;MQ=51.05;MQ0=30;MQRankSum=-12.988;QD=29.57;ReadPosRankSum=-2.847;VQSLOD=4.4729;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:69.17:0,69,881	0/0:4,0:4:6.02:0,6,77	0/0:77,0:19:21.63:0,22,213	0/0:87,0:20:9.78:0,10,196	1/1:10,21:31:55.67:907,56,0	0/0:11,0:11:30.10:0,30,384	0/0:41,0:41:99:0,102,1307	0/1:30,18:41:46.56:592,0,47	0/0:49,0:49:99:0,123,1565	1/1:6,17:24:60.10:960,60,0	1/1:7,17:24:63.20:987,63,0	0/0:40,1:41:99:0,114,1445	0/0:28,0:28:81.26:0,81,1038	1/1:10,20:30:75.25:1210,75,0	0/0:50,0:50:84.26:0,84,1063	0/0:22,0:22:60.19:0,60,770	1/1:6,4:9:24.05:331,24,0	1/1:7,4:9:22.88:290,23,0	0/1:15,7:19:31.61:347,0,32	1/1:9,19:28:63.21:1006,63,0	1/1:30,7:32:32.91:499,33,0	0/0:40,0:40:99:0,114,1452	0/0:31,0:31:78.23:0,78,972	0/0:62,0:62:99:0,129,1680	1/1:9,23:32:69.40:1166,69,0	1/1:8,23:31:75.25:1214,75,0	1/1:14,15:28:60.63:947,61,0	1/1:5,6:11:28.34:452,28,0
chr10	49725333	.	A	ATG	13485.62	PASS	AB=0.675;AC=26;AF=0.464;AN=56;BaseQRankSum=7.864;DP=988;FS=0.000;HRun=0;HaplotypeScore=208.4216;InbreedingCoeff=0.8541;MQ=50.26;MQ0=24;MQRankSum=-9.505;QD=33.38;ReadPosRankSum=-3.899;VQSLOD=4.0943;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:72.04:0,72,936	0/0:7,0:7:15.04:0,15,190	0/0:76,0:18:39.10:0,39,442	0/0:92,0:21:49.65:0,50,525	1/1:5,26:32:75.26:1256,75,0	0/0:13,0:13:36.12:0,36,468	0/0:42,0:42:99:0,103,1336	0/1:27,15:37:99:531,0,167	0/0:47,0:47:99:0,119,1514	1/1:7,23:30:77.24:1226,77,0	1/1:3,22:26:60.20:968,60,0	0/0:46,0:46:91.27:0,91,1433	0/0:27,0:27:78.25:0,78,1011	1/1:11,25:33:84.26:1377,84,0	0/0:48,0:48:78.25:0,78,1000	0/0:25,0:25:66.19:0,66,842	1/1:2,16:17:39.13:662,39,0	1/1:2,16:18:29.69:468,30,0	0/1:10,17:23:54.39:510,0,54	1/1:5,29:34:87.27:1425,87,0	1/1:5,40:44:70.45:1185,70,0	0/0:37,0:37:96.30:0,96,1233	0/0:28,0:28:78.25:0,78,1008	0/0:64,0:64:99:0,153,2011	1/1:6,23:29:81.27:1303,81,0	1/1:7,22:29:72.25:1202,72,0	1/1:7,17:24:54.18:895,54,0	1/1:3,9:12:30.57:478,31,0
chr10	49725365	.	A	ATTGTATG	1777.59	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=1.747;DP=912;FS=0.797;HRun=0;HaplotypeScore=286.0570;InbreedingCoeff=0.9739;MQ=54.29;MQ0=9;MQRankSum=-6.852;QD=38.64;ReadPosRankSum=-0.306;VQSLOD=2.5784;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:66.20:0,66,1524	1/1:1,5:6:18.01:595,18,0	0/0:63,0:32:75.64:0,76,1494	0/0:61,0:25:60.49:0,60,1119	0/0:30,0:30:69.24:0,69,1642	0/0:11,0:11:27.09:0,27,642	0/0:48,0:48:99:0,102,2025	0/0:31,0:31:66.16:0,66,1167	0/0:39,0:40:92.95:0,93,1983	0/0:34,0:34:83.78:0,84,1965	0/0:26,0:26:11.15:0,11,1066	0/0:39,0:39:90.44:0,90,2077	0/0:27,0:27:57.17:0,57,1248	0/0:34,0:31:75.26:0,75,1846	1/1:8,29:40:39.05:1302,39,0	0/0:31,0:31:78.19:0,78,1594	0/0:20,0:19:45.15:0,45,1094	0/0:19,0:19:27.62:0,28,615	0/0:20,0:18:51.11:0,51,1027	0/0:34,0:34:69.24:0,69,1674	0/0:55,0:52:81.57:0,82,2146	0/0:42,0:42:99:0,102,2343	0/0:28,0:28:75.24:0,75,1672	0/0:59,0:58:99:0,132,2979	0/0:25,0:25:47.66:0,48,1128	0/0:27,0:26:57.19:0,57,1244	0/0:22,0:22:41.77:0,42,959	0/0:8,0:8:21.07:0,21,520
chr10	49725399	.	T	TTG	1594.90	PASS	AB=0.905;AC=17;AF=0.327;AN=52;BaseQRankSum=-5.809;DP=873;FS=7.620;HRun=0;HaplotypeScore=193.2665;InbreedingCoeff=0.1148;MQ=48.82;MQ0=48;MQRankSum=3.765;QD=3.42;ReadPosRankSum=-1.441;VQSLOD=1.6268;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:34:11.10:0,11,56	0/0:7,0:9:5.68:0,6,28	./.	./.	0/1:23,0:29:0.43:0,0,42	1/1:15,0:15:5.55:89,6,0	0/1:36,3:40:2.36:237,0,2	1/1:33,0:27:6.92:31,7,0	1/1:31,3:32:21.02:241,21,0	0/1:31,0:41:0.90:1,0,92	0/0:15,0:19:8.01:0,8,34	0/1:28,6:32:82.65:225,0,83	0/1:15,9:24:25.63:198,0,26	0/1:28,0:31:0.23:0,0,58	0/0:22,0:30:26.72:0,27,123	0/1:19,10:29:99:238,0,100	0/0:21,0:25:5.78:0,6,28	0/1:19,0:20:5.66:6,0,7	0/0:28,0:16:2.84:0,3,14	0/0:23,0:29:7.90:0,8,49	0/1:52,0:46:0:0,0,0	0/0:29,0:40:30.77:0,31,147	0/1:23,0:20:50.30:72,0,50	0/1:43,7:50:94.85:401,0,95	0/0:11,0:15:14.58:0,15,69	0/0:21,0:19:8.48:0,8,41	0/0:13,0:25:12.25:0,12,66	0/0:7,0:11:5.68:0,6,28
chr10	49725992	.	TG	T	10291.10	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=12.341;DP=572;FS=1.072;HRun=6;HaplotypeScore=75.4643;InbreedingCoeff=0.9928;MQ=91.60;MQ0=0;MQRankSum=-5.004;QD=27.96;ReadPosRankSum=4.360;VQSLOD=5.3921;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,44:46:99:1387,129,0	1/1:0,6:6:15.04:161,15,0	0/0:25,0:25:69.21:0,69,874	0/0:24,0:24:55.61:0,56,685	1/1:0,17:17:48.12:516,48,0	0/0:13,0:13:36.12:0,36,473	0/0:25,0:25:75.22:0,75,958	1/1:5,25:30:75.19:806,75,0	0/0:14,0:14:36.11:0,36,461	1/1:2,15:17:45.11:484,45,0	1/1:3,18:21:54.14:580,54,0	0/0:18,0:18:54.14:0,54,667	0/0:15,0:15:36.12:0,36,473	1/1:2,17:19:45.11:484,45,0	1/1:3,16:19:11.65:476,12,0	0/0:18,0:18:54.18:0,54,710	1/1:5,27:32:81.20:870,81,0	1/1:2,25:27:66.17:709,66,0	1/1:3,17:20:51.09:531,51,0	1/1:1,26:27:72.18:774,72,0	1/1:2,17:19:48.12:516,48,0	0/0:19,0:19:48.16:0,48,630	0/0:19,0:19:51.13:0,51,650	0/0:14,0:14:42.14:0,42,553	1/1:1,12:13:39.10:419,39,0	1/1:1,13:14:36.09:387,36,0	1/1:3,27:30:81.20:871,81,0	1/1:1,10:11:30.08:322,30,0
chr10	49727178	.	T	TG	924.01	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-7.319;DP=619;FS=7.719;HRun=6;HaplotypeScore=59.4946;InbreedingCoeff=0.8981;MQ=82.04;MQ0=0;MQRankSum=-3.957;QD=27.18;ReadPosRankSum=0.716;VQSLOD=4.0049;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,31:34:81.26:1019,81,0	0/0:7,0:7:18.04:0,18,184	0/0:25,0:25:50.67:0,51,462	0/0:15,0:14:38.03:0,38,340	0/0:13,0:13:36.06:0,36,360	0/0:22,0:22:57.12:0,57,580	0/0:29,0:29:82.97:0,83,818	0/0:30,0:30:75.15:0,75,758	0/0:21,0:21:60.14:0,60,612	0/0:26,0:26:72.15:0,72,727	0/0:14,0:14:36.08:0,36,367	0/0:22,0:22:63.14:0,63,642	0/0:27,0:27:78.17:0,78,795	0/0:25,0:25:72.16:0,72,734	0/0:22,0:22:60.13:0,60,610	0/0:21,0:21:48.10:0,48,490	0/0:30,0:30:72.15:0,72,734	0/0:31,0:31:81.18:0,81,826	0/0:20,0:20:48.93:0,49,543	0/0:13,0:13:39.09:0,39,396	0/0:46,0:46:99:0,120,1204	0/0:17,0:17:45.08:0,45,453	0/0:13,0:13:35.67:0,36,346	0/0:25,0:25:69.15:0,69,704	0/0:22,0:22:60.11:0,60,601	0/0:16,0:16:42.09:0,42,423	0/0:29,0:29:84.15:0,84,842	0/0:4,0:4:6.01:0,6,61
chr10	49728169	.	AGTGTGTGT	A	1006.81	PASS	AB=0.964;AC=19;AF=0.352;AN=54;BaseQRankSum=5.919;DP=844;FS=7.031;HRun=0;HaplotypeScore=230.3243;InbreedingCoeff=0.3445;MQ=64.68;MQ0=35;MQRankSum=-3.564;QD=2.38;ReadPosRankSum=1.517;VQSLOD=1.9475;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:32,0:28:0.65:44,1,0	0/0:7,0:7:3.01:0,3,38	0/0:38,0:22:6.02:0,6,76	0/0:49,0:39:12.04:0,12,150	0/0:16,0:15:0:0,0,0	0/0:16,0:18:13.60:0,14,265	0/0:44,0:45:53.85:0,54,1432	1/1:34,0:29:9.70:28,10,0	0/0:27,0:29:39.13:0,39,1235	0/1:29,0:26:1.64:147,0,2	0/1:16,0:16:0:0,0,0	0/0:40,0:38:51.02:0,51,1373	0/0:21,0:21:16.73:0,17,903	1/1:39,0:39:11.50:128,12,0	0/0:24,0:33:18.06:0,18,427	0/1:20,10:27:15.59:327,0,16	0/1:35,0:33:31.98:70,0,32	0/1:31,0:31:50.99:114,0,51	1/1:24,0:22:14.08:229,14,0	0/0:19,0:18:2.37:0,2,8	1/1:89,0:84:2.50:10,2,0	0/0:26,0:26:24.08:0,24,798	0/0:24,0:21:8.77:0,9,366	0/0:43,0:45:60.07:0,60,1784	0/1:16,0:15:3.53:9,0,4	0/1:35,0:32:20.19:20,0,51	1/1:12,0:11:3.01:41,3,0	./.
chr10	49728202	.	GTGTGTGTGTGGT	G	3685.01	PASS	AB=0.997;AC=19;AF=0.339;AN=56;BaseQRankSum=10.183;DP=795;FS=19.424;HRun=0;HaplotypeScore=246.5022;InbreedingCoeff=0.3758;MQ=54.86;MQ0=50;MQRankSum=1.107;QD=10.62;ReadPosRankSum=-1.231;VQSLOD=1.0819;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:49,0:44:99:179,0,1092	0/0:5,0:5:12.04:0,12,252	0/0:51,0:11:32.97:0,33,386	0/0:65,0:18:50.79:0,51,684	1/1:13,0:12:2.62:20,3,0	0/0:12,0:12:25.88:0,26,535	0/0:40,0:40:99:0,102,3324	1/1:6,28:30:80.85:1084,81,0	0/0:26,0:25:57.19:0,57,2218	0/1:27,0:23:99:386,0,160	0/1:7,0:7:0:0,0,0	0/0:39,0:37:93.13:0,93,2962	0/0:24,0:24:66.22:0,66,2092	0/0:28,0:27:6.94:0,7,177	0/0:28,0:27:34.82:0,35,881	0/0:25,0:23:46.82:0,47,566	0/1:28,0:27:99:289,0,219	0/1:23,0:23:99:213,0,297	1/1:3,10:11:29.58:738,30,0	1/1:2,13:14:17.33:108,17,0	1/1:15,68:79:2.24:53,2,0	0/0:22,0:22:39.07:0,39,1613	0/0:20,0:17:17.45:0,17,797	0/0:52,0:51:99:0,137,4907	0/0:10,0:9:9:0,9,86	0/1:30,0:28:99:389,0,152	1/1:0,12:12:4.57:107,5,0	0/1:11,0:11:38.93:119,0,39
chr10	49728206	.	GTGTGTGGT	G	4861.21	PASS	AB=0.860;AC=28;AF=0.500;AN=56;BaseQRankSum=11.063;DP=764;FS=19.886;HRun=0;HaplotypeScore=199.5307;InbreedingCoeff=0.6958;MQ=57.65;MQ0=49;MQRankSum=0.133;QD=12.79;ReadPosRankSum=-0.206;VQSLOD=2.6057;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:42,0:41:99:114,0,808	0/0:5,0:5:12.04:0,12,191	0/0:52,0:12:35.71:0,36,422	0/0:64,0:19:41.81:0,42,668	1/1:1,10:10:2.56:19,3,0	0/0:11,0:11:22.62:0,23,394	0/0:39,0:39:99:0,105,2492	1/1:33,0:29:63.33:884,63,0	0/0:28,0:27:62.91:0,63,1699	1/1:5,20:22:14.45:805,14,0	0/1:0,5:5:0:0,0,0	0/0:37,0:35:88.02:0,88,2185	0/0:21,0:21:37.86:0,38,1430	1/1:2,19:20:8.24:142,8,0	0/0:30,0:29:41.59:0,42,825	0/1:27,0:24:99:116,0,431	1/1:20,2:21:37.73:600,38,0	1/1:19,1:22:43.29:624,43,0	1/1:13,0:11:28.59:512,29,0	1/1:15,0:14:11.97:95,12,0	0/1:83,0:79:5.90:12,0,6	0/0:22,0:22:39.06:0,39,1121	0/0:20,0:17:20.37:0,20,617	0/0:54,0:54:99:0,144,3695	1/1:1,8:9:9.01:113,9,0	1/1:4,21:23:38.37:609,38,0	1/1:12,0:12:3.01:56,3,0	1/1:8,0:8:12.04:160,12,0
chr10	49728208	.	G	GA	107.08	PASS	AB=0.967;AC=6;AF=0.111;AN=54;BaseQRankSum=6.014;DP=755;FS=49.839;HRun=0;HaplotypeScore=159.6752;InbreedingCoeff=0.3135;MQ=58.06;MQ0=42;MQRankSum=-5.263;QD=1.04;ReadPosRankSum=1.254;VQSLOD=0.7985;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:42,5:41:99:163,0,734	0/0:4,0:4:9.03:0,9,118	0/0:53,0:13:30.35:0,30,316	0/0:62,0:18:45:0,45,591	0/1:11,0:10:0.02:0,0,0	0/0:9,0:9:12.90:0,13,135	0/0:36,2:38:93.75:0,94,1223	0/0:31,0:29:58.43:0,58,687	0/0:29,0:28:59.60:0,60,792	0/0:26,0:22:58.59:0,59,694	0/1:5,0:5:0:0,0,0	0/0:38,0:36:63.44:0,63,1072	0/0:22,0:22:59.94:0,60,777	0/0:21,0:20:4.92:0,5,14	0/0:32,0:31:42.08:0,42,500	0/1:27,1:25:5.48:5,0,348	0/0:22,0:21:37.12:0,37,405	0/0:21,0:21:51.47:0,51,602	0/0:13,0:11:25.66:0,26,231	./.	0/0:80,0:79:8.60:0,9,33	0/0:22,0:22:38.89:0,39,526	0/0:18,0:15:17.41:0,17,246	0/0:53,0:53:99:0,135,1804	0/0:10,0:9:6.81:0,7,22	0/0:24,1:23:0.07:0,0,455	1/1:12,0:12:2.93:32,3,0	0/0:8,0:8:12.04:0,12,163
chr10	49728389	.	GAT	G	209.47	PASS	AB=0.734;AC=13;AF=0.232;AN=56;BaseQRankSum=6.939;DP=525;FS=11.099;HRun=0;HaplotypeScore=211.1656;InbreedingCoeff=-0.2630;MQ=33.95;MQ0=39;MQRankSum=-2.550;QD=1.07;ReadPosRankSum=-4.420;VQSLOD=0.0203;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,1:43:10.84:0,11,499	0/0:5,0:4:2.87:0,3,25	0/0:28,0:3:2.67:0,3,11	0/0:23,0:2:2.93:0,3,34	0/0:21,5:25:2.89:0,3,24	0/1:4,6:10:24.04:24,0,57	0/0:8,1:9:6.47:0,6,105	0/0:11,0:7:19.62:0,20,163	0/1:10,5:15:47.78:48,0,126	0/1:20,4:24:26.01:26,0,661	0/1:10,2:14:4.61:5,0,64	0/1:10,9:18:30.88:31,0,130	0/1:6,1:7:15.43:15,0,84	0/1:9,6:15:13.15:13,0,88	0/0:13,0:13:6.51:0,7,100	0/0:20,1:20:20.70:0,21,312	0/0:15,1:16:3.21:0,3,282	0/0:11,0:13:2.13:0,2,325	0/1:15,3:12:21.17:21,0,203	1/1:9,7:13:0.45:1,0,0	0/0:31,9:40:12.53:0,13,349	0/0:12,4:19:7.21:0,7,122	0/0:9,5:13:11.77:0,12,162	0/0:19,1:20:19.72:0,20,307	0/1:12,6:21:1.30:1,0,143	0/1:13,9:19:99:114,0,272	0/0:6,4:13:11.15:0,11,177	0/1:3,2:5:42.63:43,0,113
chr10	49728406	.	TGC	T	625.22	PASS	AB=0.979;AC=30;AF=0.556;AN=54;BaseQRankSum=0.445;DP=374;FS=1.660;HRun=0;HaplotypeScore=195.3157;InbreedingCoeff=0.2072;MQ=40.90;MQ0=9;MQRankSum=0.025;QD=2.22;ReadPosRankSum=-1.173;VQSLOD=2.0420;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:27,7:32:3.01:88,0,3	./.	0/1:17,0:6:9.51:10,0,136	0/0:16,0:3:2.93:0,3,41	0/1:21,0:21:0:0,0,0	1/1:13,0:13:5.85:44,6,0	0/0:3,0:3:0.47:0,0,2	1/1:1,0:1:2.68:11,3,0	0/1:15,0:15:4.15:31,0,4	1/1:18,0:19:5.82:81,6,0	1/1:9,0:9:2.53:11,3,0	1/1:16,0:15:9.33:29,9,0	1/1:4,0:4:5.79:36,6,0	1/1:12,0:12:5.10:15,5,0	1/1:12,0:12:4.65:30,5,0	1/1:15,0:15:28.68:227,29,0	0/1:11,0:9:7.94:24,0,8	0/0:5,0:5:2.98:0,3,22	0/1:11,0:10:5.14:17,0,5	0/0:13,0:13:3.30:0,3,11	1/1:32,0:32:0.34:1,0,0	0/0:16,0:16:0.37:0,0,1	0/1:12,0:12:0.09:0,0,0	0/0:11,0:11:2.85:0,3,23	0/0:16,0:16:4.30:0,4,30	0/1:22,0:20:1.59:73,0,2	0/0:7,0:10:0.20:0,0,19	1/1:5,0:5:6.50:29,7,0
chr10	49728407	.	GCGCTCGCC	G	4299.69	PASS	AB=0.735;AC=40;AF=0.714;AN=56;BaseQRankSum=1.183;DP=315;FS=22.272;HRun=0;HaplotypeScore=166.1840;InbreedingCoeff=0.4524;MQ=42.46;MQ0=8;MQRankSum=-0.818;QD=16.73;ReadPosRankSum=3.904;VQSLOD=2.6026;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:29:3.30:148,3,0	0/1:3,0:2:0:0,0,0	0/0:17,0:6:18.03:0,18,371	0/0:16,0:3:2.90:0,3,51	0/1:10,5:19:0:0,0,0	1/1:1,4:10:14.92:200,15,0	1/1:2,1:3:0.47:1,0,0	1/1:0,1:1:3.01:82,3,0	1/1:2,6:12:11.61:280,12,0	1/1:3,2:10:26.81:502,27,0	1/1:3,1:8:4.07:20,4,0	1/1:4,8:14:17.53:350,18,0	1/1:1,0:3:6.02:131,6,0	1/1:2,3:9:11.01:175,11,0	0/1:9,0:9:1.59:27,0,2	1/1:12,0:14:29.79:375,30,0	1/1:5,2:8:17.42:334,17,0	0/0:2,0:2:2.92:0,3,17	1/1:3,3:6:17.65:380,18,0	0/1:1,4:11:1.45:43,0,1	1/1:13,7:27:2.29:7,2,0	0/1:6,7:14:0.20:1,0,0	0/1:3,6:12:0.10:1,0,0	0/0:7,2:10:1.28:0,1,14	0/0:3,5:13:0.02:0,0,25	1/1:6,7:17:46.69:905,47,0	1/1:3,3:8:12.49:184,12,0	1/1:2,0:4:9.03:153,9,0
chr10	49728411	.	T	TGTG	1550.69	PASS	AB=0.845;AC=30;AF=0.600;AN=50;BaseQRankSum=-2.500;DP=297;FS=21.375;HRun=0;HaplotypeScore=163.6335;InbreedingCoeff=0.3099;MQ=45.28;MQ0=3;MQRankSum=0.431;QD=7.08;ReadPosRankSum=2.560;VQSLOD=1.7249;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,1:27:1.01:3,1,0	./.	0/0:16,0:6:13.59:0,14,156	0/0:13,0:4:3.01:0,3,38	./.	0/0:9,0:9:3.43:0,3,11	0/0:1,2:3:0.24:0,0,0	1/1:1,0:1:1.25:3,1,0	1/1:10,2:12:8.85:159,9,0	0/1:8,2:10:20.66:152,0,21	1/1:4,3:8:2.94:18,3,0	1/1:12,3:14:14.93:160,15,0	0/0:3,0:3:2.78:0,3,17	0/1:8,0:8:5.60:35,0,6	1/1:1,0:8:2.97:20,3,0	1/1:4,0:15:10.96:91,11,0	1/1:4,3:5:17.92:203,18,0	./.	1/1:3,3:6:10.50:204,11,0	0/0:10,1:11:3.27:0,3,9	0/1:15,8:26:0.01:1,0,0	0/1:8,5:13:0.08:0,0,0	0/1:10,1:11:0.28:1,0,0	0/1:3,3:6:0.01:0,0,0	0/1:9,2:12:3.57:4,0,4	1/1:13,6:18:35.56:531,36,0	0/1:8,0:8:18.16:61,0,18	1/1:2,2:4:3.64:34,4,0
chr10	49728413	.	GCCA	G	683.18	PASS	AB=0.970;AC=37;AF=0.685;AN=54;BaseQRankSum=1.790;DP=306;FS=47.260;HRun=0;HaplotypeScore=167.2194;InbreedingCoeff=0.3222;MQ=45.11;MQ0=3;MQRankSum=-1.258;QD=2.48;ReadPosRankSum=-0.388;VQSLOD=1.3613;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:27:4.34:54,4,0	0/1:1,1:2:0:0,0,0	0/0:13,0:6:18.05:0,18,295	0/1:12,0:5:0:0,0,0	0/1:19,0:19:0:0,0,0	1/1:9,0:9:14.58:88,15,0	0/1:4,0:4:0:0,0,0	0/0:2,0:2:0.11:0,0,16	1/1:12,0:12:6.55:52,7,0	0/1:11,0:11:8.23:83,0,8	1/1:8,0:8:5.16:20,5,0	1/1:15,0:14:13.18:88,13,0	1/1:3,0:3:5.91:40,6,0	1/1:7,1:8:3.95:12,4,0	1/1:7,1:8:5.62:55,6,0	1/1:17,0:17:12.32:45,12,0	1/1:7,0:5:1.60:59,2,0	./.	0/1:6,0:6:1.69:3,0,2	0/1:12,0:12:6.01:8,0,6	1/1:24,2:27:0.45:2,0,0	0/1:13,0:13:0.25:0,0,0	0/1:11,0:11:0.03:1,0,0	0/1:6,0:6:0:0,0,0	0/0:12,0:12:6.30:0,6,42	1/1:21,0:19:6.84:98,7,0	0/1:8,0:8:4.81:5,0,13	1/1:4,0:4:8.91:92,9,0
chr10	49728429	.	GTA	G	72.53	PASS	AB=0.987;AC=11;AF=0.196;AN=56;BaseQRankSum=4.764;DP=574;FS=17.135;HRun=0;HaplotypeScore=279.9542;InbreedingCoeff=-0.0252;MQ=38.95;MQ0=11;MQRankSum=-1.933;QD=0.36;ReadPosRankSum=-6.316;VQSLOD=0.2742;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:56,6:57:65.59:66,0,777	0/0:6,0:6:8.64:0,9,77	0/0:43,0:15:14.43:0,14,382	0/0:34,0:11:13.09:0,13,329	0/0:23,0:23:2.99:0,3,24	0/0:13,0:13:20.81:0,21,217	0/0:16,0:16:2.19:0,2,52	0/0:11,0:11:24.06:0,24,456	0/0:14,0:14:20.71:0,21,282	0/0:35,0:35:84.48:0,84,966	0/0:15,0:13:3.23:0,3,38	0/0:21,0:20:21.63:0,22,405	0/0:9,0:9:17.41:0,17,158	0/1:13,0:13:32.98:33,0,75	0/1:13,0:13:15.28:15,0,42	0/0:35,0:35:71.45:0,71,1217	0/1:14,0:12:9.78:10,0,305	0/1:8,0:7:13.07:13,0,131	0/0:8,0:8:21:0,21,329	0/0:15,0:15:17.65:0,18,269	1/1:36,0:36:1.62:31,2,0	0/1:19,0:18:0.90:1,0,33	1/1:18,0:17:0.86:2,1,0	0/0:15,0:15:0.30:0,0,42	0/1:21,0:21:27.45:27,0,140	0/0:40,0:36:92.04:0,92,1412	0/0:10,0:10:5.31:0,5,119	0/0:6,0:6:14.07:0,14,168
chr10	49728440	.	GTGA	G	201.36	PASS	AB=0.954;AC=11;AF=0.196;AN=56;BaseQRankSum=8.605;DP=651;FS=35.803;HRun=0;HaplotypeScore=298.3740;InbreedingCoeff=-0.0678;MQ=36.95;MQ0=15;MQRankSum=-2.649;QD=0.92;ReadPosRankSum=-2.896;VQSLOD=1.0590;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:71,1:67:2.40:2,0,2097	0/0:8,1:9:1.11:0,1,255	0/0:58,0:18:34.58:0,35,875	0/0:45,0:16:35.95:0,36,640	0/0:22,0:22:6.02:0,6,105	0/0:13,0:13:24:0,24,483	0/1:17,1:18:14.81:15,0,139	0/0:25,0:25:71.83:0,72,1543	0/0:17,0:16:19.17:0,19,358	0/1:33,3:36:67.78:68,0,1579	0/0:12,1:11:2.90:0,3,49	0/0:26,0:24:32.87:0,33,706	0/0:12,0:12:20.12:0,20,390	0/1:15,1:15:6.72:7,0,191	0/1:13,0:13:31.29:31,0,120	0/0:43,0:42:97.58:0,98,2132	0/1:12,1:11:93.87:94,0,310	0/1:8,0:7:75.11:75,0,188	0/0:8,0:8:21.07:0,21,479	0/0:16,0:16:17.47:0,17,392	0/0:38,0:37:7.81:0,8,175	0/1:19,1:19:1.50:1,0,121	0/0:19,0:18:4.73:0,5,51	1/1:13,1:14:10.50:32,11,0	0/0:21,0:21:2.03:0,2,256	0/0:39,1:36:38.93:0,39,1917	0/1:9,1:10:12.05:12,0,131	0/0:4,1:5:11.16:0,11,218
chr10	49728449	.	GGT	G	90.11	PASS	AB=0.954;AC=8;AF=0.143;AN=56;BaseQRankSum=7.387;DP=678;FS=28.995;HRun=0;HaplotypeScore=295.8161;InbreedingCoeff=0.0551;MQ=37.75;MQ0=19;MQRankSum=-3.951;QD=0.99;ReadPosRankSum=-1.679;VQSLOD=1.2706;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:73,0:69:99:0,109,2251	0/0:8,0:8:10.30:0,10,156	0/0:68,0:18:47.94:0,48,865	0/0:60,0:23:16.02:0,16,474	0/0:19,0:19:6.02:0,6,121	0/0:12,0:13:17.09:0,17,171	0/0:18,0:18:4.09:0,4,159	0/0:26,0:26:72.20:0,72,1460	0/0:16,0:15:16.67:0,17,258	0/0:36,0:38:51.51:0,52,1274	0/1:12,0:11:0:0,0,0	0/0:26,0:24:36.10:0,36,636	0/0:13,0:13:15.25:0,15,323	0/0:15,0:15:9.26:0,9,195	0/1:13,0:13:6.88:7,0,111	0/0:50,0:47:99:0,110,2099	0/1:10,1:12:71.96:72,0,235	0/1:5,1:7:82.16:82,0,149	0/0:9,0:9:24.08:0,24,487	0/0:15,0:16:13.97:0,14,202	0/0:26,5:33:10.09:0,10,185	0/1:16,0:18:20.93:21,0,51	0/0:20,0:19:8.29:0,8,72	1/1:14,1:15:1.75:5,2,0	0/0:20,0:20:6.78:0,7,269	0/0:38,0:35:76.19:0,76,1540	0/1:7,1:10:18.15:18,0,121	0/0:5,0:5:11.48:0,11,173
chr10	49728451	.	TAC	T	137.51	PASS	AB=0.927;AC=11;AF=0.196;AN=56;BaseQRankSum=8.494;DP=681;FS=41.029;HRun=0;HaplotypeScore=292.8266;InbreedingCoeff=-0.0276;MQ=37.64;MQ0=19;MQRankSum=-4.469;QD=1.04;ReadPosRankSum=-3.627;VQSLOD=0.7718;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:67,4:68:94.29:0,94,2214	0/1:8,0:8:8.26:8,0,93	0/0:76,0:22:51.81:0,52,847	0/0:59,1:22:8.47:0,8,415	0/0:19,0:19:6.02:0,6,72	0/0:13,0:13:2.72:0,3,48	0/1:17,1:18:26.44:26,0,99	0/0:26,0:26:72.24:0,72,1352	0/0:16,0:15:9.17:0,9,121	0/0:34,4:38:5.20:0,5,981	0/1:12,1:11:0.07:0,0,0	0/0:26,0:24:12.84:0,13,362	0/0:13,0:13:9.94:0,10,129	0/1:15,1:15:4.57:5,0,147	0/1:11,0:11:19.36:19,0,54	0/0:50,0:47:99:0,109,2090	0/1:11,2:11:63.20:63,0,187	0/1:6,2:7:92.32:92,0,106	0/0:9,0:9:24.08:0,24,483	0/0:15,0:15:9.62:0,10,185	0/0:29,4:31:9.80:0,10,162	0/1:19,1:19:6.04:6,0,32	0/0:20,0:19:7.07:0,7,43	1/1:11,4:15:8.90:37,9,0	0/0:20,0:20:1.68:0,2,270	0/0:37,1:35:61.68:0,62,1203	0/1:9,1:10:14.25:14,0,55	0/0:4,1:5:8.79:0,9,142
chr10	49728455	.	T	TATG	3124.10	PASS	AB=0.762;AC=20;AF=0.357;AN=56;BaseQRankSum=9.894;DP=721;FS=72.164;HRun=0;HaplotypeScore=318.7755;InbreedingCoeff=-0.3906;MQ=37.12;MQ0=26;MQRankSum=-3.491;QD=9.13;ReadPosRankSum=0.560;VQSLOD=0.3746;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:78,1:75:99:0,111,2281	0/1:5,5:10:35.06:293,0,35	0/0:80,0:22:52.40:0,52,759	0/0:63,1:22:44.85:0,45,576	0/0:17,3:20:5.64:0,6,77	0/1:9,4:13:37.73:291,0,38	0/1:13,4:17:37.27:37,0,166	0/0:28,0:27:60.93:0,61,1149	0/1:10,7:15:75.50:75,0,179	0/1:24,11:37:99:862,0,773	0/1:8,4:11:0.36:0,0,0	0/1:21,6:25:99:108,0,521	0/1:5,9:15:79.69:387,0,80	0/1:10,5:14:26.44:26,0,172	0/1:8,5:13:51.31:154,0,51	0/0:50,5:52:99:0,117,2082	0/1:11,2:11:92.95:93,0,218	0/0:7,1:7:21.03:0,21,294	0/0:11,0:10:24.08:0,24,444	0/1:15,5:20:99:117,0,189	0/0:32,0:30:6.67:0,7,165	0/1:16,2:17:3.54:4,0,51	0/1:16,8:23:41.47:75,0,41	1/1:14,1:15:3.46:8,3,0	0/1:16,7:23:43.34:43,0,255	0/1:24,12:34:99:472,0,921	0/1:8,2:10:58.09:58,0,101	0/1:4,2:6:99:174,0,100
chr10	49728475	.	G	GT	1484.51	PASS	AB=0.891;AC=23;AF=0.411;AN=56;BaseQRankSum=11.082;DP=634;FS=71.002;HRun=1;HaplotypeScore=250.7557;InbreedingCoeff=0.0031;MQ=36.35;MQ0=53;MQRankSum=-4.075;QD=6.01;ReadPosRankSum=-0.012;VQSLOD=-0.7317;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:79,0:72:99:0,110,1914	1/1:5,4:9:9.56:128,10,0	0/0:76,0:15:10.71:0,11,336	0/0:64,0:19:32.93:0,33,421	0/0:9,6:14:0:0,0,1	0/1:11,0:11:22.65:69,0,23	0/1:15,0:14:9.94:10,0,94	0/0:22,1:20:19.03:0,19,538	0/1:14,0:12:27.72:28,0,83	0/1:19,9:27:99:375,0,285	0/0:7,6:11:1.77:0,2,6	0/1:19,1:17:49.37:49,0,198	0/1:13,0:13:61.80:152,0,62	0/0:10,4:13:4.35:0,4,54	1/1:5,5:10:1.85:58,2,0	0/0:49,5:49:99:0,111,1539	1/1:8,3:10:2.45:77,2,0	0/1:6,0:6:63.85:113,0,64	0/0:9,0:6:12.04:0,12,166	0/1:8,7:15:30.84:31,0,73	0/0:21,3:21:7.53:0,8,66	0/0:13,2:14:6.28:0,6,51	1/1:22,2:23:4.85:49,5,0	1/1:13,0:13:9.66:142,10,0	0/1:12,8:20:3.60:4,0,63	0/1:16,13:26:99:263,0,390	1/1:2,2:4:3.01:44,3,0	0/1:5,0:5:54.28:54,0,70
chr10	49728476	.	G	GTC	227.16	PASS	AB=0.974;AC=15;AF=0.268;AN=56;BaseQRankSum=8.094;DP=632;FS=34.683;HRun=0;HaplotypeScore=258.9076;InbreedingCoeff=0.2531;MQ=36.34;MQ0=54;MQRankSum=-3.804;QD=1.40;ReadPosRankSum=0.264;VQSLOD=1.1875;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:80,0:72:99:0,150,2127	0/1:7,2:9:2.42:72,0,2	0/0:78,0:15:27.74:0,28,358	0/0:62,0:18:32.55:0,33,427	0/0:15,0:14:0:0,0,0	1/1:11,0:11:5.54:46,6,0	0/1:15,0:14:1.81:2,0,103	0/0:24,0:21:44.65:0,45,540	0/1:14,0:12:4.39:4,0,6	0/1:28,0:27:58.61:59,0,191	0/0:12,0:10:3.74:0,4,12	0/1:20,0:17:21.33:24,0,21	0/1:13,0:13:8.18:65,0,8	0/0:13,0:12:3.27:0,3,27	1/1:5,5:10:1.88:49,2,0	0/0:54,0:49:99:0,115,1534	0/0:10,0:10:7.67:0,8,38	0/0:6,0:6:12.28:0,12,84	0/0:8,0:6:12.03:0,12,154	0/0:14,0:14:11.29:0,11,97	0/0:21,0:21:4.83:0,5,44	0/0:15,0:14:3.69:0,4,48	1/1:23,0:23:7.02:23,7,0	1/1:13,0:13:6.77:24,7,0	0/0:20,0:20:4.11:0,4,50	0/0:29,0:26:36.82:0,37,299	0/0:4,0:4:2.37:0,2,8	0/1:5,0:5:5.58:6,0,54
chr10	49728480	.	G	GTCT	1389.82	PASS	AB=0.805;AC=24;AF=0.429;AN=56;BaseQRankSum=9.777;DP=570;FS=54.519;HRun=0;HaplotypeScore=232.1938;InbreedingCoeff=-0.0896;MQ=35.55;MQ0=60;MQRankSum=-4.696;QD=5.24;ReadPosRankSum=0.049;VQSLOD=0.9261;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:78,0:72:99:0,131,2499	1/1:7,0:8:11.25:119,11,0	0/0:72,0:12:27.46:0,27,463	0/0:65,0:17:29.93:0,30,509	0/1:9,0:11:0.10:0,0,1	1/1:7,3:10:2.67:125,3,0	0/1:9,1:10:28.96:29,0,100	0/1:20,0:20:1.66:2,0,478	0/1:4,3:9:13.99:53,0,14	0/1:11,0:21:76.80:422,0,77	0/0:7,1:9:1.36:0,1,3	0/1:13,4:16:29.87:102,0,30	1/1:3,8:11:11.34:242,11,0	0/1:7,0:8:3.91:4,0,4	0/1:9,0:9:3.29:64,0,3	0/0:47,4:46:99:0,104,1743	0/1:7,0:8:36.13:36,0,62	0/0:6,0:6:11.53:0,12,119	0/0:8,0:5:8.99:0,9,126	0/1:6,0:9:46.84:47,0,61	0/1:22,0:20:0.53:1,0,37	0/0:10,1:12:3.41:0,3,37	0/1:13,6:21:7.64:53,0,8	0/1:12,0:12:5.09:5,0,16	0/1:9,0:15:21.19:21,0,52	0/1:12,1:21:99:149,0,217	1/1:4,0:4:3.01:45,3,0	0/1:3,0:4:24.50:24,0,45
chr10	49728482	.	TGA	T	657.22	PASS	AB=0.915;AC=38;AF=0.679;AN=56;BaseQRankSum=7.272;DP=551;FS=51.459;HRun=0;HaplotypeScore=221.9370;InbreedingCoeff=0.3872;MQ=35.78;MQ0=66;MQRankSum=-5.682;QD=2.36;ReadPosRankSum=-2.620;VQSLOD=0.7574;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:79,0:72:99:0,140,2599	1/1:8,0:8:7.24:23,7,0	0/0:72,0:12:26.94:0,27,370	0/0:59,1:16:27.52:0,28,308	0/1:10,2:11:0:0,0,0	1/1:7,2:9:8.86:33,9,0	1/1:7,2:8:5.39:43,5,0	0/1:22,0:18:21.12:100,0,21	1/1:7,3:9:3.68:24,4,0	1/1:21,2:21:29.79:160,30,0	1/1:10,1:9:2.74:12,3,0	1/1:8,8:14:20.59:96,21,0	1/1:8,3:11:4.45:36,4,0	0/0:7,1:8:2.49:0,2,13	1/1:9,0:9:9.22:34,9,0	0/0:46,0:45:67.96:0,68,1690	0/1:9,0:8:1.51:2,0,63	1/1:5,1:6:12.76:64,13,0	1/1:6,1:4:1.77:4,2,0	1/1:6,2:8:2.26:17,2,0	0/1:22,0:19:5.09:8,0,5	1/1:8,4:11:7.11:35,7,0	0/1:15,5:19:14.64:17,0,15	1/1:9,3:12:1.63:4,2,0	0/1:12,3:15:3.04:7,0,3	1/1:21,3:21:7.77:82,8,0	0/0:4,0:4:0.47:0,0,1	1/1:4,0:4:3.37:18,3,0
chr10	49728484	.	AGTG	A	1074.71	PASS	AB=0.876;AC=25;AF=0.446;AN=56;BaseQRankSum=9.320;DP=536;FS=52.833;HRun=0;HaplotypeScore=216.2962;InbreedingCoeff=-0.1428;MQ=35.64;MQ0=69;MQRankSum=-5.596;QD=4.33;ReadPosRankSum=-1.588;VQSLOD=0.8450;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:77,1:71:99:0,138,3343	1/1:6,2:8:9.03:161,9,0	0/0:69,0:10:24.06:0,24,463	0/0:60,0:15:26.81:0,27,469	0/1:11,0:10:0.01:0,0,0	0/1:4,4:9:3.67:89,0,4	0/1:6,2:7:18.29:18,0,66	0/1:19,0:15:21.84:22,0,223	0/1:7,2:9:36.09:41,0,36	0/1:17,4:20:99:254,0,111	1/1:7,4:9:3.19:17,3,0	0/1:12,4:14:16.17:87,0,16	0/1:4,4:12:12.27:157,0,12	0/0:6,1:8:8.59:0,9,61	1/1:8,1:9:10.50:134,11,0	0/0:42,4:44:70.60:0,71,2192	0/1:9,1:9:25.16:25,0,67	0/0:6,0:6:1.47:0,1,21	0/0:6,0:4:6.02:0,6,79	0/1:8,0:8:22.84:25,0,23	0/1:20,0:18:7.39:7,0,21	1/1:8,1:10:2.89:12,3,0	0/1:13,5:18:29.49:39,0,29	0/0:10,1:11:0.69:0,1,20	0/1:13,0:15:12.88:13,0,89	0/1:20,2:19:97.74:98,0,113	1/1:2,1:3:3.01:30,3,0	0/1:3,1:4:3.65:4,0,34
chr10	49728485	.	G	GTA	718.44	PASS	AB=0.942;AC=17;AF=0.304;AN=56;BaseQRankSum=5.329;DP=524;FS=43.141;HRun=0;HaplotypeScore=213.1564;InbreedingCoeff=0.0756;MQ=35.73;MQ0=71;MQRankSum=-5.194;QD=3.19;ReadPosRankSum=0.089;VQSLOD=1.2562;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:78,0:71:99:0,135,2085	0/1:6,0:6:0.62:1,0,5	0/0:68,0:10:11.17:0,11,216	0/1:58,0:14:1.92:2,0,200	0/0:10,0:9:0:0,0,0	0/1:9,0:9:2.57:33,0,3	0/0:8,0:7:5.43:0,5,24	0/1:19,0:14:21.78:22,0,98	0/1:9,1:9:1.41:84,0,1	1/1:20,1:19:0.35:164,0,0	0/0:9,0:8:3.74:0,4,12	1/1:16,0:14:7.59:170,8,0	0/1:8,4:12:31.11:49,0,31	0/1:7,1:8:23.93:58,0,24	0/0:9,0:9:8.33:0,8,28	0/0:51,0:45:47.46:0,47,1366	0/0:8,0:9:6.89:0,7,79	0/1:4,0:6:11.05:11,0,30	0/0:6,0:4:5.88:0,6,36	0/1:7,0:7:1.37:12,0,1	0/0:20,0:18:2.91:0,3,9	0/0:9,0:8:0.28:0,0,4	0/1:17,1:17:5.03:12,0,5	0/0:9,0:11:2.20:0,2,11	0/1:11,2:13:20.30:26,0,20	1/1:22,0:19:10.25:215,10,0	0/0:3,0:3:2.50:0,2,9	0/0:4,0:4:5.43:0,5,27
chr10	49728487	.	G	GA	906.19	PASS	AB=0.884;AC=20;AF=0.357;AN=56;BaseQRankSum=8.477;DP=516;FS=44.226;HRun=0;HaplotypeScore=207.3882;InbreedingCoeff=-0.0582;MQ=35.89;MQ0=73;MQRankSum=-4.002;QD=4.87;ReadPosRankSum=-1.901;VQSLOD=1.2718;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:77,0:70:99:0,130,1907	1/1:4,2:6:9.03:111,9,0	0/0:68,1:10:18.01:0,18,229	0/0:54,0:13:14.27:0,14,282	0/0:8,1:9:0:0,0,1	0/1:8,0:8:3.72:83,0,4	0/1:8,0:7:17.44:17,0,69	0/1:17,2:14:15.71:16,0,181	0/1:9,1:9:24.57:33,0,25	0/1:15,6:19:72:236,0,72	0/0:7,2:8:1.74:0,2,6	0/1:16,0:14:54.63:65,0,55	0/1:8,4:12:8.32:167,0,8	0/0:7,1:8:7.24:0,7,29	1/1:4,5:9:4.88:75,5,0	0/0:50,0:44:96.59:0,97,1293	0/1:8,2:9:29.66:30,0,68	0/0:6,0:6:8.37:0,8,53	0/0:6,0:4:6.02:0,6,83	0/1:5,2:7:27.93:28,0,30	0/0:21,0:18:6.78:0,7,50	0/0:9,0:8:1.93:0,2,6	1/1:16,2:17:3.91:54,4,0	0/0:11,0:11:2.28:0,2,24	0/1:10,2:12:4.22:4,0,45	0/1:17,6:19:89:89,0,146	1/1:3,0:3:3.01:44,3,0	0/1:4,0:4:8.07:8,0,36
chr10	49728489	.	GTA	G	265.64	PASS	AB=0.887;AC=31;AF=0.554;AN=56;BaseQRankSum=6.260;DP=504;FS=28.269;HRun=0;HaplotypeScore=208.7359;InbreedingCoeff=0.1753;MQ=36.00;MQ0=75;MQRankSum=-6.013;QD=0.92;ReadPosRankSum=-3.225;VQSLOD=0.9452;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:73,0:66:99:0,140,2621	0/1:6,0:6:1.85:2,0,4	0/0:68,0:10:15.02:0,15,247	0/1:54,0:12:5.37:5,0,130	0/1:7,2:8:0:0,0,0	0/1:6,2:8:0.45:6,0,0	1/1:6,2:7:5.73:41,6,0	0/1:17,0:12:1.01:17,0,1	0/1:7,3:9:5.63:9,0,6	0/1:18,2:19:4.82:64,0,5	1/1:8,1:8:2.74:12,3,0	1/1:8,8:14:6.46:58,6,0	0/0:9,3:12:1.68:0,2,20	0/0:6,1:8:3.48:0,3,23	1/1:9,0:9:5.47:24,5,0	0/0:47,3:44:67.47:0,67,1697	0/1:10,0:9:0.05:0,0,68	1/1:5,1:6:11.57:53,12,0	0/1:4,1:3:0:0,0,0	1/1:4,2:7:4.46:20,4,0	0/1:19,0:16:7.63:13,0,8	1/1:4,4:7:3.26:9,3,0	0/1:13,5:17:4.88:5,0,22	1/1:8,3:11:3.19:8,3,0	0/1:9,3:12:5.62:6,0,12	0/1:19,3:19:17.13:40,0,17	0/0:1,0:3:0.47:0,0,1	1/1:4,0:4:2.85:15,3,0
chr10	49728493	.	G	GA	991.15	PASS	AB=0.863;AC=21;AF=0.389;AN=54;BaseQRankSum=8.214;DP=458;FS=39.369;HRun=0;HaplotypeScore=184.2552;InbreedingCoeff=-0.1454;MQ=27.99;MQ0=86;MQRankSum=-5.260;QD=5.86;ReadPosRankSum=-4.265;VQSLOD=1.0934;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:68,1:62:99:0,124,1901	1/1:5,1:6:9.03:136,9,0	0/0:62,0:8:12.04:0,12,168	0/0:54,0:9:12.04:0,12,162	0/0:8,0:7:0:0,0,0	0/1:4,2:6:18.70:85,0,19	0/1:6,1:6:24.52:25,0,29	0/1:12,1:8:13.28:13,0,47	0/1:8,1:8:35.74:36,0,69	0/1:16,5:19:89.99:194,0,90	0/0:6,3:8:1.49:0,1,5	0/1:10,2:11:70.62:71,0,119	0/1:8,4:12:46.78:156,0,47	0/0:6,0:6:8.39:0,8,78	0/1:7,1:8:0.26:82,0,0	0/0:45,2:41:97.74:0,98,1322	0/1:6,2:8:34.76:35,0,35	0/1:5,0:5:23.82:52,0,24	./.	0/1:6,1:7:11.38:50,0,11	0/0:12,0:9:1.55:0,2,4	0/0:7,1:7:1.93:0,2,6	1/1:11,3:13:3.89:59,4,0	0/0:11,0:11:2.20:0,2,20	0/1:12,0:11:4.64:5,0,72	0/1:17,6:19:92.78:93,0,151	1/1:3,0:3:3.01:44,3,0	1/1:3,0:3:1.42:4,1,0
chr10	49728495	.	GTAT	G	869.23	PASS	AB=0.995;AC=33;AF=0.611;AN=54;BaseQRankSum=8.338;DP=435;FS=60.673;HRun=0;HaplotypeScore=182.0937;InbreedingCoeff=-0.0399;MQ=28.09;MQ0=92;MQRankSum=-4.187;QD=3.45;ReadPosRankSum=-1.514;VQSLOD=0.6987;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:64,0:58:99:0,133,2878	0/1:6,0:6:13.63:16,0,14	0/0:58,0:8:12.04:0,12,239	0/1:53,0:9:39.72:40,0,97	0/1:8,0:6:0.23:0,0,0	0/1:6,0:6:4.87:26,0,5	1/1:4,2:5:5.98:73,6,0	1/1:13,0:8:9.96:62,10,0	0/1:8,0:7:15.25:19,0,15	1/1:18,0:16:19.55:260,20,0	1/1:9,0:8:2.70:16,3,0	0/1:12,0:11:8.57:124,0,9	0/1:12,0:12:21.34:25,0,21	0/1:5,0:5:4.21:17,0,4	0/1:8,0:8:8.11:27,0,8	0/0:46,0:40:63.99:0,64,1638	0/1:8,0:8:9.20:9,0,28	0/1:6,0:6:30.43:30,0,39	./.	1/1:6,0:6:5.52:26,6,0	0/0:8,2:7:0.24:0,0,0	1/1:8,0:7:3.62:14,4,0	0/1:12,1:12:33.14:33,0,48	1/1:7,0:10:6.20:16,6,0	0/1:12,0:11:7.06:11,0,7	1/1:21,0:17:25.29:133,25,0	1/1:1,0:1:1.55:4,2,0	1/1:3,0:3:3.48:41,3,0
chr10	49728511	.	TGA	T	222.43	PASS	AB=0.826;AC=31;AF=0.646;AN=48;BaseQRankSum=6.471;DP=325;FS=22.133;HRun=0;HaplotypeScore=134.0393;InbreedingCoeff=0.3420;MQ=27.69;MQ0=104;MQRankSum=-5.323;QD=1.82;ReadPosRankSum=-3.498;VQSLOD=0.1684;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:56,1:50:66.82:0,67,1295	1/1:2,0:2:2.98:23,3,0	./.	./.	0/1:6,1:4:0.21:0,0,0	1/1:2,1:3:2.80:13,3,0	0/1:2,2:3:0:0,0,0	0/1:11,1:9:5.26:5,0,16	1/1:4,0:3:5.24:21,5,0	1/1:9,3:9:13.32:83,13,0	1/1:2,4:4:2.74:12,3,0	1/1:8,0:7:10.61:46,11,0	1/1:7,2:9:3.55:58,4,0	0/0:4,0:3:2.79:0,3,29	1/1:5,0:5:5.42:23,5,0	0/0:36,0:29:2.73:0,3,877	0/0:7,0:7:2.93:0,3,58	0/0:6,0:6:3.01:0,3,58	./.	1/1:2,1:3:0.89:2,1,0	1/1:12,0:7:1.66:4,2,0	0/0:4,0:4:1.96:0,2,10	0/1:4,4:8:9.36:9,0,16	1/1:9,1:10:3.42:9,3,0	0/1:6,0:5:0:0,0,0	1/1:9,1:7:6.67:38,7,0	./.	1/1:0,1:1:0.89:2,1,0
chr10	49728518	.	G	GACA	272.14	PASS	AB=0.862;AC=19;AF=0.432;AN=44;BaseQRankSum=4.928;DP=276;FS=9.914;HRun=0;HaplotypeScore=112.3329;InbreedingCoeff=0.2881;MQ=26.93;MQ0=99;MQRankSum=-4.696;QD=3.94;ReadPosRankSum=-0.323;VQSLOD=1.7972;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:44:68.49:0,68,1199	1/1:0,1:1:3:27,3,0	./.	./.	0/0:4,1:3:0:0,0,1	1/1:2,1:3:3.01:37,3,0	0/0:0,1:1:0:0,0,0	0/1:11,1:11:67.86:117,0,68	0/0:3,0:2:0:0,0,0	1/1:4,3:5:6.66:63,7,0	1/1:1,4:3:0.22:8,0,0	0/0:5,0:4:0:0,0,0	0/1:6,1:7:0.21:0,0,2	./.	0/0:1,0:1:2.90:0,3,16	0/0:29,0:24:53.12:0,53,859	0/0:6,0:6:6.02:0,6,95	0/0:2,0:3:3.01:0,3,56	./.	1/1:2,1:3:2.99:24,3,0	1/1:11,0:7:2:18,2,0	./.	1/1:4,4:8:5.77:52,6,0	0/0:9,1:10:0.52:0,1,1	0/0:4,0:4:0:0,0,0	0/1:7,1:4:14.84:37,0,15	./.	1/1:0,1:1:0.89:2,1,0
chr10	49728520	.	ATATG	A	192.25	PASS	AB=0.877;AC=25;AF=0.521;AN=48;BaseQRankSum=5.072;DP=263;FS=15.694;HRun=0;HaplotypeScore=99.2851;InbreedingCoeff=0.3613;MQ=26.22;MQ0=97;MQRankSum=-3.188;QD=1.92;ReadPosRankSum=-2.319;VQSLOD=-0.0350;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:42:55.61:0,56,1334	0/0:1,0:1:0:0,0,0	./.	0/0:40,0:1:3.01:0,3,44	0/1:5,1:3:0.20:0,0,0	0/0:3,0:3:2.04:0,2,6	0/1:2,0:1:0:0,0,0	0/0:14,0:11:8.26:0,8,85	1/1:2,1:2:2.22:7,2,0	1/1:6,1:5:5.63:63,6,0	1/1:5,0:3:4.22:24,4,0	1/1:2,3:4:2.68:11,3,0	1/1:5,2:7:4.94:30,5,0	0/1:1,1:1:0:0,0,0	1/1:0,1:1:3.01:46,3,0	0/1:24,3:20:97.33:97,0,838	0/0:5,0:5:6.02:0,6,153	0/0:2,0:2:3.01:0,3,83	./.	1/1:1,2:3:2.37:8,2,0	1/1:11,0:6:4.52:19,5,0	./.	0/0:6,2:8:7.55:0,8,43	1/1:7,0:7:0.30:2,0,0	0/1:3,2:4:0:0,0,0	0/1:8,0:4:1.20:4,0,1	./.	0/1:1,0:1:0:0,0,0
chr10	49728527	.	TATG	T	198.43	PASS	AB=0.969;AC=20;AF=0.526;AN=38;BaseQRankSum=4.888;DP=231;FS=20.435;HRun=0;HaplotypeScore=83.7583;InbreedingCoeff=0.4152;MQ=29.83;MQ0=85;MQRankSum=-3.946;QD=2.96;ReadPosRankSum=-0.703;VQSLOD=0.2176;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:33:41.81:0,42,747	0/0:1,0:1:0:0,0,0	./.	0/0:37,0:2:6.01:0,6,92	0/1:6,0:3:0:0,0,0	1/1:1,0:1:2.98:21,3,0	./.	1/1:10,0:9:15.79:159,16,0	./.	1/1:5,1:4:5.19:27,5,0	1/1:5,0:3:3.16:18,3,0	./.	0/0:4,2:6:3.85:0,4,11	./.	1/1:1,0:1:2.37:8,2,0	0/0:27,0:20:9.61:0,10,595	0/0:5,0:5:11.97:0,12,189	0/0:1,0:1:3.01:0,3,73	./.	1/1:3,0:3:3:26,3,0	1/1:10,0:6:2.66:13,3,0	./.	1/1:6,0:6:2.86:27,3,0	0/1:5,0:5:0:0,0,0	0/1:5,0:4:0:0,0,0	0/1:6,1:4:17.57:18,0,21	./.	./.
chr10	49728550	.	GGA	G	134.37	PASS	AB=0.982;AC=11;AF=0.500;AN=22;BaseQRankSum=3.124;DP=104;FS=4.419;HRun=0;HaplotypeScore=115.5896;InbreedingCoeff=-0.0604;MQ=108.59;MQ0=7;MQRankSum=0.614;QD=1.44;ReadPosRankSum=0.196;VQSLOD=2.1282;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:17:1.22:32,1,0	./.	0/1:17,1:10:40.37:56,0,40	0/1:28,0:17:16.72:63,0,17	./.	./.	0/0:1,0:1:0.47:0,0,1	./.	./.	./.	./.	./.	1/1:2,0:2:2.98:21,3,0	./.	./.	0/1:16,0:11:28.06:32,0,28	0/0:4,0:4:1.89:0,2,6	0/0:1,0:1:1.55:0,2,4	./.	./.	1/1:5,3:6:2.68:11,3,0	./.	./.	0/0:3,0:3:0.47:0,0,1	./.	1/1:1,0:1:0.89:2,1,0	./.	./.
chr10	49728551	.	GA	G	601.60	PASS	AB=0.898;AC=19;AF=0.864;AN=22;BaseQRankSum=-0.525;DP=101;FS=8.258;HRun=1;HaplotypeScore=113.0786;InbreedingCoeff=-0.0144;MQ=115.72;MQ0=3;MQRankSum=-1.109;QD=6.02;ReadPosRankSum=1.265;VQSLOD=0.2064;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,13:16:23.58:286,24,0	./.	0/1:16,1:11:31.84:55,0,32	0/1:24,2:18:12.41:19,0,12	./.	./.	1/1:0,1:1:3.01:42,3,0	./.	./.	./.	./.	./.	1/1:2,0:2:2.50:9,2,0	./.	./.	1/1:8,6:11:6.40:25,6,0	1/1:0,4:4:12.04:167,12,0	1/1:0,1:1:3.01:39,3,0	./.	./.	0/1:6,1:6:0.05:0,0,0	./.	./.	1/1:0,3:3:3.01:42,3,0	./.	1/1:1,0:1:0.89:2,1,0	./.	./.
chr10	49728577	.	G	GT	33.17	PASS	AB=0.924;AC=5;AF=0.250;AN=20;BaseQRankSum=2.841;DP=134;FS=41.207;HRun=0;HaplotypeScore=150.5930;InbreedingCoeff=0.1293;MQ=166.78;MQ0=2;MQRankSum=-2.369;QD=0.68;ReadPosRankSum=-0.741;VQSLOD=1.2389;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:11:15.57:0,16,216	./.	0/1:25,0:22:6.74:7,0,430	0/0:59,0:46:84.22:0,84,970	./.	./.	./.	./.	./.	./.	./.	./.	1/1:1,0:2:2.37:8,2,0	./.	./.	0/1:12,5:11:26.52:96,0,27	0/0:4,0:4:5.98:0,6,60	0/0:1,0:1:3.01:0,3,39	./.	./.	0/1:5,0:4:0.11:0,0,0	./.	./.	0/0:3,0:3:3.01:0,3,39	./.	0/0:1,0:1:0:0,0,0	./.	./.
chr10	49730410	.	CA	C	16023.40	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=16.956;DP=657;FS=2.075;HRun=1;HaplotypeScore=90.8183;InbreedingCoeff=0.9999;MQ=91.03;MQ0=0;MQRankSum=-5.273;QD=39.47;ReadPosRankSum=2.625;VQSLOD=5.4443;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,40:40:99:1468,105,0	1/1:0,11:11:30.10:414,30,0	0/0:28,0:28:82.52:0,83,1280	0/0:25,0:25:61.61:0,62,966	1/1:0,29:29:87.29:1216,87,0	0/0:26,0:26:78.27:0,78,1244	0/0:19,0:19:57.16:0,57,861	1/1:0,33:33:99:1365,99,0	0/0:23,0:23:69.24:0,69,1103	1/1:0,23:23:69.22:945,69,0	1/1:0,25:25:69.23:964,69,0	0/0:34,0:34:99:0,102,1559	0/0:20,0:20:60.20:0,60,959	1/1:0,18:18:51.17:713,51,0	1/1:0,24:24:66.22:923,66,0	0/0:21,0:21:63.21:0,63,1007	1/1:0,34:34:93.31:1300,93,0	1/1:0,20:20:54.18:755,54,0	1/1:0,20:20:60.19:818,60,0	1/1:0,27:27:81.27:1133,81,0	1/1:0,25:25:66.22:923,66,0	0/0:18,0:18:54.17:0,54,839	0/0:16,0:16:48.16:0,48,767	0/0:21,0:21:63.20:0,63,979	1/1:0,20:20:54.18:755,54,0	1/1:0,25:25:72.22:989,72,0	1/1:0,21:21:63.21:881,63,0	1/1:0,11:11:33.11:461,33,0
chr10	49733140	.	AAC	A	1347.63	PASS	AB=0.908;AC=33;AF=0.635;AN=52;BaseQRankSum=4.143;DP=658;FS=13.808;HRun=0;HaplotypeScore=97.8112;InbreedingCoeff=0.2972;MQ=58.49;MQ0=22;MQRankSum=0.955;QD=3.00;ReadPosRankSum=-1.114;VQSLOD=0.6327;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:37:29.50:0,29,277	1/1:7,0:8:2.84:14,3,0	./.	./.	0/1:16,2:18:24.74:25,0,221	1/1:15,0:17:5.84:40,6,0	1/1:31,6:36:9.02:96,9,0	0/0:19,0:19:0:0,0,0	1/1:15,9:26:20.63:188,21,0	0/1:20,0:20:7.63:8,0,149	0/0:12,0:12:15.01:0,15,176	1/1:16,1:18:5.84:46,6,0	1/1:18,9:28:15.34:143,15,0	0/1:20,1:23:19.44:19,0,226	1/1:12,9:25:22.08:191,22,0	0/0:21,0:23:20.28:0,20,195	0/0:26,3:29:3.84:0,4,382	1/1:18,1:22:11.53:74,12,0	1/1:13,0:13:2.84:14,3,0	0/1:12,0:14:0:0,0,0	0/1:37,1:41:24.66:59,0,25	1/1:16,5:22:11.86:111,12,0	1/1:11,5:16:6.02:64,6,0	1/1:17,11:32:35.42:312,35,0	0/1:13,2:14:30.80:31,0,171	0/1:23,2:26:20.82:21,0,258	1/1:19,0:25:11.23:56,11,0	0/0:6,0:6:9.48:0,9,113
chr10	49733884	.	ACAAAAGGCAGCAGTGTGTGGT	A	19318.89	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=16.693;DP=731;FS=0.750;HRun=0;HaplotypeScore=378.1079;InbreedingCoeff=0.9892;MQ=80.07;MQ0=0;MQRankSum=-12.932;QD=67.55;ReadPosRankSum=3.885;VQSLOD=3.0131;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,27:40:33.11:1925,33,0	1/1:2,7:9:11.81:706,12,0	0/0:27,0:27:75.26:0,75,4958	0/0:18,0:18:31.68:0,32,2733	1/1:3,13:16:15.88:898,16,0	0/0:24,0:24:66.23:0,66,5762	0/0:40,0:40:99:0,117,9792	0/0:32,0:32:90.30:0,90,6689	0/0:19,0:19:57.20:0,57,4741	1/1:5,25:30:66.05:2157,66,0	1/1:1,17:18:21.07:1056,21,0	0/0:32,0:32:93.32:0,93,8922	0/0:30,0:30:87.30:0,87,7068	1/1:3,23:26:42.14:2437,42,0	1/1:6,14:20:27.09:1339,27,0	0/0:29,0:29:87.30:0,87,8021	1/1:12,23:35:24.08:1414,24,0	1/1:9,22:31:33.11:1904,33,0	0/0:22,0:22:63.21:0,63,4422	0/0:29,0:29:84.29:0,84,7793	0/0:48,0:48:99:0,141,12575	0/0:20,0:20:57.20:0,57,4625	0/0:17,0:17:51.18:0,51,4654	0/0:33,0:33:99:0,99,8115	1/1:2,14:16:18.06:1060,18,0	1/1:10,28:38:75.11:3538,75,0	0/0:25,0:25:69.24:0,69,5735	1/1:0,7:7:15.05:884,15,0
chr10	49734541	.	T	TGAA	20663.20	PASS	AB=1.000;AC=48;AF=0.857;AN=56;BaseQRankSum=2.211;DP=686;FS=2.430;HRun=0;HaplotypeScore=168.6848;InbreedingCoeff=0.6961;MQ=83.16;MQ0=0;MQRankSum=-8.728;QD=33.49;ReadPosRankSum=3.941;VQSLOD=5.1765;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,37:41:99:2513,108,0	1/1:0,6:7:18.06:425,18,0	0/0:31,0:31:69.87:0,70,1367	0/0:14,0:14:38.83:0,39,627	1/1:3,1:28:72.52:858,73,0	1/1:0,0:15:45.15:583,45,0	1/1:5,1:18:45.10:574,45,0	1/1:34,0:34:13.36:304,13,0	1/1:2,1:28:75.21:948,75,0	1/1:5,1:29:79.81:1024,80,0	1/1:6,1:24:53.83:580,54,0	1/1:4,1:26:75.24:982,75,0	1/1:1,0:30:87.28:1129,87,0	1/1:2,0:19:48.16:638,48,0	1/1:5,26:33:75.26:1758,75,0	1/1:0,30:31:87.30:2052,87,0	1/1:1,0:19:48.16:624,48,0	1/1:1,0:14:39.13:515,39,0	1/1:23,0:23:28:110,28,0	0/0:24,0:24:16:0,16,60	0/1:24,0:24:68.80:82,0,69	1/1:3,1:35:96.31:1251,96,0	1/1:3,0:27:69.01:800,69,0	1/1:6,1:27:69.18:871,69,0	1/1:3,0:22:54.90:665,55,0	1/1:5,0:34:85.04:1070,85,0	0/1:21,0:21:51.88:52,0,54	1/1:1,0:8:21.03:254,21,0
chr10	49734920	.	T	TA	23300.73	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-12.379;DP=678;FS=2.742;HRun=1;HaplotypeScore=59.9761;InbreedingCoeff=0.9997;MQ=76.42;MQ0=0;MQRankSum=-6.504;QD=41.39;ReadPosRankSum=3.265;VQSLOD=5.4446;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,32:33:87.29:1373,87,0	1/1:0,10:10:27.09:430,27,0	0/0:26,0:26:78.20:0,78,1013	0/0:20,0:20:46.69:0,47,554	1/1:1,34:35:87.17:1327,87,0	0/0:29,0:29:87.29:0,87,1213	0/0:19,0:19:57.16:0,57,776	1/1:0,36:36:99:1666,108,0	0/0:21,0:21:63.19:0,63,846	1/1:2,20:22:60.13:880,60,0	1/1:2,19:21:45.15:706,45,0	1/1:0,28:28:57.19:910,57,0	1/1:1,19:20:57.19:907,57,0	1/1:0,15:15:39.13:623,39,0	1/1:0,31:31:78.27:1243,78,0	1/1:0,27:27:72.25:1150,72,0	1/1:1,31:32:87.30:1387,87,0	1/1:0,16:16:39.13:623,39,0	1/1:2,20:21:54.14:794,54,0	1/1:0,33:33:93.32:1474,93,0	1/1:0,31:31:81.28:1293,81,0	1/1:0,20:20:51.17:814,51,0	1/1:0,19:19:54.18:860,54,0	1/1:0,14:14:39.13:623,39,0	1/1:0,24:24:66.23:1054,66,0	1/1:0,29:29:87.24:1298,87,0	1/1:0,30:30:78.27:1245,78,0	1/1:0,15:15:39.13:622,39,0
chr10	49736637	.	GA	G	2227.11	PASS	AB=0.775;AC=21;AF=0.375;AN=56;BaseQRankSum=3.844;DP=555;FS=3.466;HRun=12;HaplotypeScore=82.4752;InbreedingCoeff=0.5199;MQ=92.47;MQ0=3;MQRankSum=0.528;QD=7.23;ReadPosRankSum=0.541;VQSLOD=2.6882;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:17.58:0,18,168	0/0:12,0:12:25.75:0,26,133	0/1:67,1:41:11.98:12,0,269	0/1:51,0:34:12.52:13,0,182	0/0:30,0:32:55:0,55,677	0/0:21,0:23:65.80:0,66,638	0/1:12,2:15:7.58:8,0,268	1/1:8,13:22:35.98:273,36,0	0/0:11,1:12:9.83:0,10,281	0/0:15,1:17:21.47:0,21,360	0/0:16,0:16:32.93:0,33,314	0/1:3,9:12:0.11:139,0,0	0/1:2,8:12:2.58:146,0,3	0/0:13,0:15:29.89:0,30,288	0/0:11,0:11:22.76:0,23,113	0/0:14,0:14:28.96:0,29,154	0/0:19,1:20:21.85:0,22,397	0/0:25,0:27:68.04:0,68,677	1/1:5,16:21:16.30:289,16,0	1/1:6,16:23:22.39:347,22,0	1/1:1,9:12:25.94:192,26,0	0/1:3,5:9:13.47:82,0,13	1/1:2,12:14:26.88:209,27,0	1/1:1,7:9:25.92:188,26,0	0/0:14,1:15:18.79:0,19,356	0/0:15,2:18:1.46:0,1,360	1/1:4,23:27:65.73:511,66,0	0/1:9,2:12:16.61:17,0,187
chr10	49736649	.	A	AAC	1048.52	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=0.228;DP=541;FS=3.608;HRun=0;HaplotypeScore=94.3420;InbreedingCoeff=0.9935;MQ=87.66;MQ0=3;MQRankSum=-0.431;QD=19.78;ReadPosRankSum=1.548;VQSLOD=4.0428;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,2:16:27.68:270,28,0	1/1:0,9:12:23.97:385,24,0	0/0:52,0:32:27.97:0,28,425	0/0:42,0:26:17.71:0,18,222	0/0:29,0:29:68.73:0,69,893	0/0:25,0:25:70.27:0,70,859	0/0:14,0:14:41.10:0,41,460	0/0:24,0:24:62.90:0,63,538	0/0:12,0:12:36.08:0,36,445	0/0:20,0:20:59.25:0,59,628	0/0:15,0:15:45.05:0,45,520	0/0:9,0:9:20.91:0,21,162	0/0:12,0:12:32.91:0,33,276	0/0:12,0:12:32.11:0,32,385	1/1:0,12:12:24.08:392,24,0	1/1:1,0:12:29:162,29,0	0/0:19,0:19:57.04:0,57,670	0/0:29,0:29:63.81:0,64,888	0/0:25,0:25:71.86:0,72,607	0/0:18,0:18:53.81:0,54,437	0/0:17,0:17:41.84:0,42,329	0/0:8,0:8:23.92:0,24,203	0/0:14,0:14:35.85:0,36,281	0/0:13,0:13:38.39:0,38,295	0/0:17,0:17:45:0,45,512	0/0:20,0:20:59.32:0,59,675	0/0:28,0:28:80.71:0,81,638	0/0:10,0:10:28.95:0,29,307
chr10	49736877	.	A	AT	2098.03	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-2.338;DP=632;FS=2.155;HRun=8;HaplotypeScore=93.8871;InbreedingCoeff=0.9689;MQ=69.81;MQ0=0;MQRankSum=-4.105;QD=25.90;ReadPosRankSum=-0.251;VQSLOD=3.7663;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,20:28:57.13:643,57,0	1/1:1,4:6:17.99:191,18,0	0/0:24,0:22:51.88:0,52,458	0/0:18,1:17:8.97:0,9,281	0/0:29,0:29:81.01:0,81,734	0/0:28,0:28:69.01:0,69,632	0/0:19,0:19:48.02:0,48,439	0/0:31,0:31:69.03:0,69,631	0/0:28,0:29:77.07:0,77,692	0/0:16,0:16:45.02:0,45,412	0/0:21,0:21:60.03:0,60,549	0/0:21,0:21:60.03:0,60,549	0/0:23,0:23:60.02:0,60,549	0/0:24,0:24:63.02:0,63,577	1/1:4,25:29:81.23:924,81,0	1/1:5,13:18:45.11:500,45,0	0/0:28,0:28:68.98:0,69,618	0/0:23,0:23:62:0,62,541	0/0:15,0:15:35.99:0,36,325	0/0:25,0:25:75.02:0,75,681	0/0:33,0:33:87.02:0,87,791	0/0:17,0:17:48.02:0,48,439	0/0:16,0:16:10.35:0,10,350	0/0:18,0:18:45.02:0,45,412	0/0:26,0:26:69.02:0,69,627	0/0:30,0:30:78.03:0,78,714	0/0:28,0:28:66.03:0,66,604	0/0:8,0:8:23.93:0,24,203
chr10	49736940	.	T	TC	24472.97	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-12.608;DP=662;FS=0.000;HRun=0;HaplotypeScore=59.2793;InbreedingCoeff=0.9994;MQ=79.06;MQ0=0;MQRankSum=-5.660;QD=44.18;ReadPosRankSum=3.354;VQSLOD=5.0493;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,30:30:78.20:1194,78,0	1/1:0,12:12:36.12:575,36,0	0/0:21,0:21:51.64:0,52,713	0/0:10,0:10:30.02:0,30,364	1/1:1,23:24:66.16:1014,66,0	0/0:20,0:20:60.20:0,60,837	0/0:32,0:32:93.30:0,93,1277	1/1:1,40:41:99:1825,120,0	0/0:25,0:25:75.25:0,75,1048	1/1:0,36:36:99:1727,108,0	1/1:0,19:19:54.18:863,54,0	1/1:0,22:22:60.20:959,60,0	1/1:0,22:22:63.21:1007,63,0	1/1:0,22:22:66.23:1055,66,0	1/1:2,27:30:84.26:1295,84,0	1/1:0,18:18:54.12:832,54,0	1/1:1,23:24:66.23:1054,66,0	1/1:1,25:26:71.73:1112,72,0	1/1:1,20:21:60.20:957,60,0	1/1:0,28:28:78.27:1235,78,0	1/1:0,24:24:66.23:1055,66,0	1/1:0,16:16:42.14:670,42,0	1/1:0,22:22:60.20:959,60,0	1/1:0,22:22:60.20:959,60,0	1/1:2,25:27:66.22:1055,66,0	1/1:0,30:30:90.31:1439,90,0	1/1:2,27:29:78.27:1247,78,0	1/1:0,9:9:24.08:384,24,0
chr10	49739434	.	GAGAGAGAC	G	874.63	PASS	AB=0.973;AC=27;AF=0.500;AN=54;BaseQRankSum=4.542;DP=542;FS=32.016;HRun=0;HaplotypeScore=133.1418;InbreedingCoeff=-0.0370;MQ=43.36;MQ0=29;MQRankSum=0.106;QD=2.24;ReadPosRankSum=2.093;VQSLOD=0.6418;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:26.02:0,26,198	1/1:10,0:10:12:100,12,0	0/0:6,0:2:0.47:0,0,1	./.	0/1:15,0:15:2.25:2,0,19	0/0:22,0:22:30.94:0,31,618	0/1:38,0:36:35.32:35,0,556	0/0:31,0:22:8.26:0,8,89	0/1:17,0:15:0.55:1,0,439	0/1:24,0:21:46.56:47,0,92	0/1:13,0:13:4.93:5,0,41	1/1:21,0:21:23.77:228,24,0	1/1:10,0:10:22.79:140,23,0	0/0:13,0:13:3.46:0,3,25	0/1:7,15:22:5.60:25,0,6	0/0:27,0:25:14.92:0,15,152	1/1:10,0:8:2.74:13,3,0	0/1:17,0:15:2.79:3,0,134	0/1:16,0:13:9.19:9,0,38	0/1:20,0:20:26.58:27,0,53	0/1:26,0:24:1.20:30,0,1	1/1:24,0:24:12.03:133,12,0	0/1:19,0:19:47.96:70,0,48	0/1:37,0:29:16.65:88,0,17	0/1:15,0:15:5.20:5,0,41	0/1:15,0:12:16.46:16,0,51	0/1:12,0:11:16.12:16,0,46	1/1:10,0:9:5.55:38,6,0
chr10	49739436	.	G	GAC	501.19	PASS	AB=0.984;AC=8;AF=0.148;AN=54;BaseQRankSum=0.528;DP=520;FS=18.437;HRun=0;HaplotypeScore=104.9635;InbreedingCoeff=0.1216;MQ=43.43;MQ0=28;MQRankSum=-1.500;QD=3.80;ReadPosRankSum=-0.964;VQSLOD=1.1974;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:41.71:0,42,325	0/1:10,0:10:9.77:10,0,107	0/0:2,0:1:0.89:0,1,2	./.	0/0:15,0:15:4.92:0,5,32	0/0:20,0:20:16.08:0,16,406	0/0:36,0:34:74.03:0,74,768	0/1:32,0:22:25.99:81,0,26	0/0:17,0:15:29.74:0,30,312	0/0:24,0:21:44.45:0,44,354	0/0:12,0:12:11.67:0,12,86	0/0:21,0:21:25.52:0,26,144	0/0:11,0:11:23.90:0,24,128	0/0:14,0:14:2.53:0,3,21	0/1:21,0:21:13.11:13,0,30	0/0:26,0:24:20.89:0,21,162	0/0:9,0:8:2.91:0,3,18	0/0:16,0:14:29.66:0,30,253	0/1:14,0:11:3.85:92,0,4	0/1:15,2:19:68.95:127,0,69	1/1:22,0:22:11.59:166,12,0	0/0:24,0:24:19.93:0,20,115	0/0:17,1:18:19.68:0,20,132	0/0:33,2:27:8.02:0,8,47	0/0:15,0:15:8.99:0,9,75	0/0:15,0:12:20.78:0,21,161	0/1:12,0:11:43.92:145,0,44	0/0:10,0:9:9.55:0,10,47
chr10	49739440	.	GAC	G	1293.50	PASS	AB=0.996;AC=33;AF=0.635;AN=52;BaseQRankSum=5.036;DP=487;FS=3.509;HRun=0;HaplotypeScore=102.9275;InbreedingCoeff=0.2780;MQ=43.30;MQ0=26;MQRankSum=-1.034;QD=3.99;ReadPosRankSum=-1.803;VQSLOD=2.4760;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:28.68:0,29,212	1/1:9,0:9:14.36:109,14,0	./.	./.	1/1:13,1:14:9.47:82,9,0	0/0:18,0:18:29.87:0,30,395	0/0:36,0:34:7.68:0,8,589	0/1:30,0:21:10.79:11,0,24	0/0:19,0:17:29.77:0,30,408	1/1:20,3:19:31.88:309,32,0	1/1:9,2:11:6.01:64,6,0	1/1:15,1:16:19.79:140,20,0	1/1:11,0:11:24.03:135,24,0	1/1:13,1:14:1.94:18,2,0	1/1:18,1:19:3:42,3,0	0/0:27,0:25:22.07:0,22,174	1/1:8,1:8:2.94:18,3,0	0/1:16,0:14:26.04:26,0,42	0/1:15,0:12:20.90:33,0,21	0/1:16,0:16:10.47:10,0,25	0/0:20,1:19:6.09:0,6,23	1/1:22,0:22:9.86:38,10,0	0/1:19,0:19:39.22:72,0,39	0/1:31,1:24:6.23:17,0,6	1/1:14,1:15:6.95:67,7,0	1/1:13,1:11:4.92:184,5,0	0/1:11,0:9:41.93:42,0,44	1/1:8,0:7:9.07:51,9,0
chr10	49739442	.	CAG	C	133.69	PASS	AB=0.989;AC=14;AF=0.259;AN=54;BaseQRankSum=2.956;DP=478;FS=4.045;HRun=0;HaplotypeScore=101.9030;InbreedingCoeff=-0.0349;MQ=43.16;MQ0=26;MQRankSum=-2.948;QD=0.70;ReadPosRankSum=0.739;VQSLOD=1.4063;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:38.43:0,38,486	0/0:9,0:9:1.55:0,2,4	./.	0/0:2,0:1:0:0,0,0	0/1:14,0:14:3.13:3,0,18	0/0:18,0:18:38.52:0,39,536	0/0:36,0:34:63.23:0,63,913	0/1:26,0:17:41.37:41,0,93	0/0:22,0:20:48.04:0,48,692	0/1:21,0:17:30.62:31,0,98	1/1:8,0:8:2.77:14,3,0	0/1:16,0:16:9.77:10,0,29	0/0:12,0:12:1.69:0,2,10	0/0:14,0:14:4.55:0,5,28	1/1:17,0:17:2.96:19,3,0	0/0:25,0:24:26.57:0,27,349	0/0:8,0:7:2.88:0,3,15	0/0:17,0:15:23.27:0,23,232	0/1:15,2:13:10.67:87,0,11	0/0:14,1:15:7.14:0,7,52	0/0:19,2:19:7.77:0,8,31	0/0:21,0:21:11.37:0,11,60	0/1:18,0:18:9.40:9,0,46	0/0:31,0:23:8.29:0,8,45	0/1:16,0:16:5.21:5,0,40	0/1:16,0:13:24.25:24,0,58	0/1:12,0:10:18.76:19,0,72	0/1:9,0:7:5.24:7,0,5
chr10	49739448	.	CAG	C	353.94	PASS	AB=0.947;AC=13;AF=0.241;AN=54;BaseQRankSum=3.495;DP=481;FS=1.716;HRun=0;HaplotypeScore=97.1559;InbreedingCoeff=0.3843;MQ=44.64;MQ0=27;MQRankSum=-5.394;QD=2.95;ReadPosRankSum=-0.098;VQSLOD=2.1741;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:44.56:0,45,714	0/0:9,0:9:15.04:0,15,166	0/0:3,0:1:2.04:0,2,6	0/0:10,0:2:0:0,0,0	0/0:11,2:13:2.17:0,2,22	0/0:20,0:20:36.05:0,36,641	0/0:31,0:29:51.01:0,51,874	1/1:18,5:15:27.86:248,28,0	0/0:23,0:21:48.15:0,48,840	0/1:18,1:15:12.08:102,0,12	1/1:10,0:10:2.78:14,3,0	0/0:15,0:15:12.28:0,12,156	0/0:11,0:11:11.81:0,12,120	0/0:15,1:16:4.14:0,4,27	0/0:17,0:17:8.85:0,9,84	0/0:26,0:25:29.69:0,30,478	1/1:9,0:8:1.24:3,1,0	0/0:15,0:14:20.87:0,21,188	0/1:16,1:12:1.67:65,0,2	0/0:15,1:16:1.64:0,2,39	./.	0/0:26,0:26:6.02:0,6,86	0/0:15,0:15:4.25:0,4,33	0/0:29,0:21:5.65:0,6,85	1/1:15,1:16:2.84:14,3,0	0/1:17,1:15:33.24:33,0,111	0/0:11,0:9:6.68:0,7,70	1/1:7,1:7:2.67:12,3,0
chr10	49739460	.	CAG	C	111.08	PASS	AB=0.902;AC=11;AF=0.204;AN=54;BaseQRankSum=4.550;DP=468;FS=0.000;HRun=0;HaplotypeScore=96.1877;InbreedingCoeff=0.0655;MQ=45.74;MQ0=28;MQRankSum=-2.606;QD=0.91;ReadPosRankSum=-2.113;VQSLOD=1.0948;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:55.92:0,56,939	0/0:9,0:9:16.28:0,16,168	0/1:9,0:3:8.70:9,0,50	0/0:28,0:7:2.98:0,3,22	0/0:8,0:8:0:0,0,0	0/0:21,0:21:44.97:0,45,758	0/0:22,0:21:38.97:0,39,675	0/0:25,0:17:32.66:0,33,309	0/0:23,0:21:57.20:0,57,1014	0/1:15,2:14:20.55:78,0,21	0/0:8,0:8:0.94:0,1,2	0/1:13,1:14:16.97:53,0,17	0/1:9,3:12:42.02:42,0,165	1/1:14,0:14:0.89:2,1,0	0/0:15,0:15:12.04:0,12,215	0/0:25,0:24:38.70:0,39,581	0/0:8,0:7:3.01:0,3,31	0/1:8,4:10:26.80:27,0,54	0/0:12,0:9:1.74:0,2,6	0/0:13,0:13:3.68:0,4,36	./.	0/0:22,3:25:3.01:0,3,54	0/0:18,0:16:0.47:0,0,1	0/1:26,2:20:0.21:0,0,0	0/0:15,1:16:0.47:0,0,1	0/0:19,0:16:4.38:0,4,121	0/1:11,0:8:11.35:11,0,55	1/1:4,0:3:0.94:2,1,0
chr10	49739462	.	GAGACAGAGACAGAGACAC	G	1558.02	PASS	AB=1.000;AC=19;AF=0.352;AN=54;BaseQRankSum=6.823;DP=475;FS=8.390;HRun=0;HaplotypeScore=153.9111;InbreedingCoeff=0.2995;MQ=47.39;MQ0=27;MQRankSum=-7.049;QD=8.16;ReadPosRankSum=-1.177;VQSLOD=1.4167;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:35.87:0,36,1396	0/0:8,0:8:15.03:0,15,217	0/0:14,0:4:0.39:0,0,92	0/0:32,0:9:5.49:0,5,31	0/0:9,0:9:2.99:0,3,24	0/0:20,0:20:46.94:0,47,1328	0/0:22,0:21:45.05:0,45,1210	1/1:23,0:15:33.52:206,34,0	0/0:23,0:21:57.14:0,57,1632	0/1:17,0:14:44.87:184,0,45	0/0:7,0:7:2.99:0,3,24	1/1:14,0:14:5.87:129,6,0	1/1:13,0:13:29.84:529,30,0	0/0:15,0:15:2.10:0,2,17	0/0:15,0:15:12.04:0,12,203	0/0:26,0:25:41.96:0,42,986	0/1:8,0:7:11.01:81,0,11	0/1:12,0:10:26.86:91,0,27	1/1:10,0:7:4.53:115,5,0	1/1:16,0:16:21.36:164,21,0	./.	1/1:23,0:23:3:25,3,0	0/0:4,14:16:0:0,0,0	1/1:28,0:20:0.47:1,0,0	0/0:18,0:18:3.31:0,3,15	0/1:16,0:14:24.90:25,0,80	0/1:11,0:8:19.72:169,0,20	0/0:6,0:5:0.46:0,0,13
chr10	49739516	.	G	GAGAGAC	7120.10	PASS	AB=0.707;AC=26;AF=0.464;AN=56;BaseQRankSum=-3.559;DP=640;FS=1.437;HRun=0;HaplotypeScore=185.2434;InbreedingCoeff=0.6634;MQ=55.28;MQ0=8;MQRankSum=-5.388;QD=21.58;ReadPosRankSum=-2.511;VQSLOD=4.2571;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:36:78.69:0,79,1469	0/0:10,0:10:21.07:0,21,427	0/0:29,0:21:38.30:0,38,570	0/0:59,0:32:55.66:0,56,940	0/1:1,16:19:0:0,0,0	0/0:19,0:19:45.14:0,45,891	0/0:23,0:23:57.65:0,58,1164	0/1:32,0:30:99:248,0,297	0/0:22,0:22:57.19:0,57,1161	1/1:7,33:41:93.10:2481,93,0	1/1:3,16:18:2.80:29,3,0	1/1:5,19:24:14.91:477,15,0	1/1:11,10:21:39.13:1043,39,0	1/1:1,17:17:2.98:102,3,0	0/0:21,0:21:48.15:0,48,948	0/0:20,0:20:51.16:0,51,1011	1/1:0,9:9:3.01:102,3,0	1/1:6,4:11:27.05:623,27,0	0/1:15,0:12:15.53:16,0,212	0/0:25,0:25:48.62:0,49,613	0/0:20,0:20:33.11:0,33,428	0/1:4,22:28:0.02:0,0,0	1/1:13,3:16:5.98:82,6,0	0/1:9,8:18:0.26:0,0,1	0/1:3,19:22:0:0,0,1	1/1:5,22:28:69.17:1475,69,0	0/0:24,0:22:23.33:0,23,647	1/1:2,4:6:15.05:442,15,0
chr10	49739522	.	CAG	C	3567.59	PASS	AB=1.000;AC=12;AF=0.214;AN=56;BaseQRankSum=0.908;DP=652;FS=7.976;HRun=0;HaplotypeScore=165.7651;InbreedingCoeff=0.7494;MQ=57.80;MQ0=8;MQRankSum=0.467;QD=19.71;ReadPosRankSum=3.144;VQSLOD=3.6973;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:36:78.27:0,78,1357	0/0:10,0:10:24.08:0,24,419	0/0:30,0:23:53.81:0,54,797	0/0:58,0:32:67.55:0,68,1060	0/0:19,0:19:16.95:0,17,104	0/0:19,0:19:44.99:0,45,754	0/0:25,0:25:66.23:0,66,1156	1/1:3,25:27:75.20:957,75,0	0/0:23,0:23:63.20:0,63,1083	0/1:38,0:38:99:144,0,480	0/0:21,0:20:20.30:0,20,204	0/0:25,0:25:39.99:0,40,289	0/0:20,0:20:37.05:0,37,298	0/0:18,0:17:19.12:0,19,115	0/0:24,0:24:60.21:0,60,1041	0/0:20,0:20:57.14:0,57,956	0/0:13,0:13:9.02:0,9,101	0/0:12,0:12:29.73:0,30,254	1/1:2,13:13:33.11:450,33,0	1/1:0,23:23:48.16:659,48,0	1/1:3,18:21:33.11:453,33,0	0/0:31,0:31:43.19:0,43,275	0/0:17,0:17:17.71:0,18,151	0/0:19,1:19:5.78:0,6,22	0/0:21,0:22:22.15:0,22,124	0/1:31,0:29:99:128,0,451	1/1:1,24:24:57.19:776,57,0	0/0:6,0:6:14.50:0,14,117
chr10	49739631	.	GGA	G	1448.49	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=2.054;DP=494;FS=1.243;HRun=0;HaplotypeScore=92.2485;InbreedingCoeff=0.8615;MQ=71.96;MQ0=17;MQRankSum=2.320;QD=19.57;ReadPosRankSum=-0.750;VQSLOD=3.4548;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:24.86:0,25,423	0/0:4,0:4:12.04:0,12,203	0/0:51,0:24:7.34:0,7,626	0/0:59,0:37:59.82:0,60,918	0/0:11,0:11:27.09:0,27,432	0/0:23,0:22:50.84:0,51,717	0/0:15,0:15:43.47:0,43,621	1/1:2,16:16:48.14:703,48,0	0/0:20,0:20:44.58:0,45,688	0/0:9,0:9:27.09:0,27,417	0/0:10,0:10:27.04:0,27,364	0/0:15,0:15:38.66:0,39,596	0/0:16,0:15:42.01:0,42,637	0/0:16,0:16:33.46:0,33,450	0/0:15,0:15:34.62:0,35,503	0/0:21,0:21:58.35:0,58,808	0/0:19,0:18:38.70:0,39,572	0/0:18,0:16:48.09:0,48,695	1/1:1,9:9:24.03:301,24,0	1/1:5,8:11:3.01:37,3,0	1/1:15,2:17:32.48:499,32,0	0/0:13,0:13:33.11:0,33,520	0/0:6,0:6:15.04:0,15,205	0/0:23,0:25:63.58:0,64,920	0/0:9,0:9:24.08:0,24,378	0/0:14,0:12:33.01:0,33,440	1/1:2,14:15:0.24:65,0,0	0/0:14,0:12:26.71:0,27,330
chr10	49739633	.	AAGAGAGAG	A	556.01	PASS	AB=0.880;AC=14;AF=0.280;AN=50;BaseQRankSum=3.311;DP=512;FS=20.310;HRun=0;HaplotypeScore=140.5210;InbreedingCoeff=0.1914;MQ=68.01;MQ0=19;MQRankSum=-4.334;QD=4.06;ReadPosRankSum=-2.603;VQSLOD=0.7657;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:15,1:18:49.36:214,0,49	0/0:4,0:4:3.01:0,3,69	./.	0/0:53,0:33:0.47:0,0,1	./.	0/0:24,0:24:27.93:0,28,718	0/0:16,0:15:12.04:0,12,306	0/0:20,0:18:3:0,3,27	0/0:18,0:20:21.75:0,22,514	1/1:12,0:12:3.14:117,3,0	1/1:10,0:10:0.47:1,0,0	0/0:14,0:15:21.03:0,21,306	0/0:16,0:16:9.01:0,9,133	1/1:16,0:16:6.01:123,6,0	0/0:15,0:17:12.51:0,13,345	0/1:17,2:20:37.95:78,0,38	0/0:16,0:18:6:0,6,64	0/1:19,0:16:8.98:9,0,116	0/0:11,0:10:3.01:0,3,35	./.	0/0:17,0:18:7.57:0,8,78	0/0:15,0:15:6.02:0,6,93	0/0:8,0:8:3.01:0,3,33	0/0:25,0:24:27.02:0,27,405	1/1:13,0:12:0.47:1,0,0	1/1:13,1:12:0.10:70,0,0	0/0:16,0:15:3.47:0,3,28	0/1:11,3:12:13.97:68,0,14
chr10	49741536	.	CA	C	12386.07	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=9.959;DP=527;FS=1.686;HRun=4;HaplotypeScore=53.6915;InbreedingCoeff=0.9977;MQ=80.06;MQ0=0;MQRankSum=-3.307;QD=32.17;ReadPosRankSum=2.674;VQSLOD=5.3499;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:87.22:0,87,1145	0/0:7,0:7:18.05:0,18,233	0/0:18,0:18:51.12:0,51,632	0/0:14,0:15:20.38:0,20,388	1/1:2,27:29:78:876,78,0	0/0:14,0:14:42.12:0,42,548	0/0:13,0:13:39.11:0,39,521	1/1:1,29:30:87.21:990,87,0	0/0:11,0:11:30.09:0,30,399	1/1:1,32:33:96.27:1136,96,0	1/1:0,22:22:57.05:647,57,0	1/1:0,13:13:33.10:395,33,0	1/1:1,22:23:60.18:718,60,0	1/1:1,22:23:69.08:803,69,0	0/0:15,0:15:39.11:0,39,520	0/0:17,0:17:45.15:0,45,621	1/1:0,17:17:45.14:538,45,0	1/1:0,18:18:51.16:610,51,0	1/1:2,13:15:39.12:463,39,0	1/1:0,16:16:48.08:556,48,0	1/1:0,19:19:48.15:574,48,0	1/1:1,11:12:30.09:359,30,0	1/1:0,20:20:54.17:645,54,0	1/1:0,15:15:42.13:502,42,0	1/1:2,23:25:66.20:790,66,0	1/1:0,20:20:60.17:708,60,0	1/1:0,22:22:51.16:610,51,0	1/1:0,13:13:39.12:466,39,0
chr10	49744425	.	GGAA	G	1400.50	PASS	AB=0.995;AC=22;AF=0.393;AN=56;BaseQRankSum=7.008;DP=347;FS=36.836;HRun=0;HaplotypeScore=71.1271;InbreedingCoeff=0.6580;MQ=54.10;MQ0=12;MQRankSum=-1.911;QD=7.65;ReadPosRankSum=2.549;VQSLOD=0.7664;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:14:32.84:0,33,395	0/1:3,0:3:13.99:14,0,20	0/0:39,0:14:32.95:0,33,305	0/1:45,0:17:10.97:11,0,204	1/1:3,11:13:14.72:91,15,0	0/0:13,0:13:32.93:0,33,305	0/0:13,0:13:32.82:0,33,301	0/0:13,0:13:27.02:0,27,329	0/0:4,0:4:11.90:0,12,134	1/1:1,18:19:38.45:276,38,0	1/1:3,19:22:8.82:53,9,0	0/0:5,0:5:14.85:0,15,160	0/0:3,0:3:8.80:0,9,81	1/1:12,0:12:29.51:199,30,0	0/1:6,0:6:10.06:10,0,33	0/0:10,0:10:9.04:0,9,289	1/1:12,0:12:15.47:158,15,0	1/1:8,0:8:20.72:154,21,0	0/0:15,0:14:42:0,42,424	0/0:9,0:9:20.97:0,21,256	0/0:5,0:5:9.01:0,9,122	0/0:5,0:4:12.02:0,12,163	0/0:8,0:7:17.93:0,18,159	0/0:7,0:7:14.67:0,15,132	1/1:11,0:10:29.63:208,30,0	1/1:5,16:21:47.68:358,48,0	0/1:3,0:2:10.97:11,0,99	1/1:5,0:5:8.92:63,9,0
chr10	49744522	.	G	GA	2732.02	PASS	AB=0.847;AC=19;AF=0.396;AN=48;BaseQRankSum=6.179;DP=189;FS=15.965;HRun=1;HaplotypeScore=53.7329;InbreedingCoeff=0.5412;MQ=44.30;MQ0=21;MQRankSum=-2.775;QD=25.30;ReadPosRankSum=2.785;VQSLOD=2.2356;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:5,1:4:19.11:19,0,74	./.	./.	0/0:5,0:1:3.01:0,3,30	1/1:4,9:12:23.86:316,24,0	0/0:12,0:9:20.82:0,21,275	0/1:6,0:6:6.77:7,0,191	0/0:6,0:6:15.04:0,15,198	./.	1/1:1,13:14:34.65:537,35,0	1/1:4,4:6:15.05:197,15,0	0/0:1,0:1:3.01:0,3,42	0/0:1,0:1:3.01:0,3,42	1/1:0,14:14:39.13:619,39,0	0/0:7,0:6:6.02:0,6,83	0/0:8,0:7:20.92:0,21,211	0/1:7,6:11:40.45:163,0,40	1/1:3,4:7:12.04:162,12,0	0/0:10,0:7:21.02:0,21,233	0/0:2,0:2:3:0,3,25	0/0:8,0:6:15.02:0,15,173	0/0:4,0:3:3.01:0,3,40	0/0:6,0:5:5.68:0,6,82	0/0:4,0:3:6.02:0,6,84	1/1:4,4:8:14.71:217,15,0	1/1:3,11:13:36.12:539,36,0	./.	1/1:1,4:4:9.03:130,9,0
chr10	49745855	.	CTT	C	1136.38	PASS	AB=0.684;AC=18;AF=0.321;AN=56;BaseQRankSum=2.663;DP=563;FS=5.128;HRun=17;HaplotypeScore=87.7774;InbreedingCoeff=0.6025;MQ=69.38;MQ0=6;MQRankSum=0.935;QD=4.98;ReadPosRankSum=6.392;VQSLOD=-0.3574;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:16,27:44:12.41:311,0,12	1/1:4,0:16:27.30:116,27,0	0/0:31,0:11:16.74:0,17,150	0/0:19,0:14:19.09:0,19,110	0/0:20,0:22:50.55:0,51,568	0/0:16,0:20:52.82:0,53,546	0/0:19,0:23:28.18:0,28,407	1/1:15,11:28:25.66:221,26,0	0/0:19,0:19:42.06:0,42,472	0/0:23,0:26:26.65:0,27,479	0/0:8,0:15:12.53:0,13,311	0/0:19,0:19:16.16:0,16,127	0/1:11,1:18:6.45:6,0,94	0/0:18,0:19:48.18:0,48,453	1/1:11,0:30:32.27:138,32,0	0/1:7,10:18:53.49:88,0,53	0/0:18,0:18:30.06:0,30,347	0/0:20,0:22:60.01:0,60,619	1/1:2,5:8:8.89:106,9,0	1/1:9,4:16:6.68:83,7,0	1/1:7,9:16:17.68:142,18,0	0/0:10,0:16:10.71:0,11,74	0/0:9,0:17:20.86:0,21,142	0/1:16,2:21:45.84:46,0,68	0/0:15,0:18:38.45:0,38,411	0/0:18,1:22:27.33:0,27,523	1/1:5,7:10:8.70:71,9,0	0/0:9,0:9:0.42:0,0,207
chr10	49746243	.	CA	C	10239.64	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=13.780;DP=646;FS=0.609;HRun=2;HaplotypeScore=123.8953;InbreedingCoeff=0.9996;MQ=78.59;MQ0=0;MQRankSum=-2.997;QD=35.31;ReadPosRankSum=3.169;VQSLOD=4.4730;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,126,1861	0/0:10,0:10:27.09:0,27,404	0/0:29,0:29:72.01:0,72,1042	0/0:21,0:20:48.18:0,48,680	1/1:4,15:19:45.14:575,45,0	0/0:15,0:15:45.14:0,45,653	0/0:27,0:27:75.24:0,75,1103	0/0:28,0:28:78.23:0,78,1031	0/0:13,0:13:39.13:0,39,584	1/1:4,16:20:54.16:667,54,0	1/1:0,16:16:45.15:584,45,0	1/1:0,19:19:51.11:640,51,0	1/1:2,18:20:57.15:721,57,0	1/1:1,23:24:69.22:895,69,0	0/0:32,0:32:96.30:0,96,1398	0/0:21,0:21:63.20:0,63,926	1/1:0,34:34:93.71:1185,94,0	1/1:0,22:22:63.20:817,63,0	0/0:26,0:26:74.83:0,75,1006	0/0:24,0:24:72.23:0,72,997	0/0:50,0:50:99:0,130,1774	1/1:2,18:20:51.17:661,51,0	1/1:2,20:22:57.18:739,57,0	1/1:0,23:23:66.21:856,66,0	1/1:2,17:19:54.18:700,54,0	1/1:1,23:24:69.22:889,69,0	0/0:18,0:18:38.97:0,39,538	1/1:0,8:8:24.08:311,24,0
chr10	49746327	.	T	TGATA	24106.23	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=7.315;DP=624;FS=3.634;HRun=0;HaplotypeScore=153.8838;InbreedingCoeff=0.9904;MQ=85.51;MQ0=0;MQRankSum=-12.613;QD=59.97;ReadPosRankSum=-0.501;VQSLOD=6.2687;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,132,2554	0/0:9,0:9:27.08:0,27,503	0/0:27,0:27:78.15:0,78,1427	0/0:24,0:24:30.96:0,31,1048	1/1:26,0:26:69.24:1531,69,0	0/0:21,0:21:60.21:0,60,1198	0/0:37,0:37:99:0,105,2097	1/1:8,20:31:93.27:2303,93,0	0/0:14,0:14:39.13:0,39,746	1/1:15,0:15:45.15:945,45,0	1/1:9,0:9:27.09:607,27,0	1/1:21,0:21:60.09:1279,60,0	1/1:17,0:17:51.18:1110,51,0	1/1:25,0:25:75.23:1537,75,0	0/0:22,0:22:63.22:0,63,1249	0/0:23,0:23:66.20:0,66,1273	1/1:26,0:26:66.19:1440,66,0	1/1:23,0:23:60.21:1290,60,0	1/1:4,19:25:69.20:1716,69,0	1/1:4,16:22:57.13:1520,57,0	1/1:6,36:44:88.61:2497,89,0	1/1:19,0:19:45.15:970,45,0	1/1:13,0:13:30:651,30,0	1/1:21,0:21:45.15:954,45,0	1/1:20,0:20:51.18:1110,51,0	1/1:16,0:16:48.16:985,48,0	1/1:0,21:25:54.66:1506,55,0	1/1:3,0:3:9.03:155,9,0
chr10	49746328	.	G	GATAT	26185.08	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=13.398;DP=606;FS=1.775;HRun=0;HaplotypeScore=137.0472;InbreedingCoeff=0.9896;MQ=85.64;MQ0=0;MQRankSum=-11.966;QD=67.84;ReadPosRankSum=0.461;VQSLOD=6.3843;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,135,2764	0/0:9,0:9:27.09:0,27,548	0/0:26,0:26:78.25:0,78,1489	0/0:24,0:24:54.77:0,55,1179	1/1:5,22:28:66.23:1867,66,0	0/0:21,0:21:60.21:0,60,1259	0/0:36,0:36:99:0,105,2202	1/1:25,0:24:70.18:1434,70,0	0/0:13,0:13:39.13:0,39,806	1/1:6,14:21:56.78:1550,57,0	1/1:1,9:10:27.09:778,27,0	1/1:3,16:19:57.18:1549,57,0	1/1:3,14:17:51.18:1432,51,0	1/1:9,18:28:81.26:2154,81,0	0/0:21,0:21:63.22:0,63,1310	0/0:24,0:24:69.20:0,69,1368	1/1:3,24:27:75.22:2103,75,0	1/1:6,19:25:69.24:1997,69,0	1/1:23,0:23:19.51:1102,20,0	1/1:19,0:19:51.17:1077,51,0	1/1:37,0:37:88.61:1820,89,0	1/1:2,16:21:48.16:1330,48,0	1/1:2,9:11:33.11:936,33,0	1/1:2,16:19:42.14:1192,42,0	1/1:1,18:19:48.16:1388,48,0	1/1:3,11:14:39.13:1122,39,0	1/1:20,0:20:54.66:1130,55,0	1/1:2,1:3:9.03:224,9,0
chr10	49746794	.	AT	A	4057.27	PASS	AB=0.971;AC=20;AF=0.357;AN=56;BaseQRankSum=-5.369;DP=606;FS=0.344;HRun=3;HaplotypeScore=100.4183;InbreedingCoeff=0.2239;MQ=73.58;MQ0=1;MQRankSum=-0.086;QD=10.97;ReadPosRankSum=-3.139;VQSLOD=0.5916;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,114,1498	0/0:5,0:5:12.03:0,12,154	0/0:25,0:16:4.14:0,4,176	0/0:19,0:18:14.77:0,15,274	0/0:24,0:24:22.95:0,23,116	0/0:16,0:16:48.11:0,48,632	0/0:7,0:7:18.61:0,19,228	1/1:1,16:17:48.08:513,48,0	0/0:21,0:21:63.17:0,63,835	0/1:26,1:27:52.60:72,0,53	0/1:22,2:24:55.58:76,0,56	0/0:12,0:12:17.24:0,17,56	0/1:21,0:21:45.63:46,0,61	0/1:26,0:26:6.27:6,0,83	0/0:22,0:22:63.17:0,63,851	0/0:14,0:14:42.11:0,42,565	0/1:29,0:29:53.24:106,0,53	0/0:12,0:12:22.30:0,22,80	1/1:2,21:24:67.11:740,67,0	1/1:1,33:34:90.17:1061,90,0	1/1:1,17:18:33.10:407,33,0	0/1:22,1:23:42.03:113,0,42	0/1:28,0:28:56.48:56,0,93	0/1:24,1:25:31.47:31,0,93	0/1:18,1:19:4.76:5,0,48	0/1:20,1:21:36.64:78,0,37	1/1:6,28:34:63.14:748,63,0	0/0:18,0:18:31.42:0,31,125
chr10	49747302	.	T	TA	3551.28	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-10.709;DP=563;FS=5.012;HRun=7;HaplotypeScore=53.2370;InbreedingCoeff=0.9419;MQ=68.92;MQ0=0;MQRankSum=0.062;QD=29.84;ReadPosRankSum=-2.848;VQSLOD=3.1441;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:24:75.10:0,75,717	0/0:10,0:10:24.03:0,24,232	0/0:6,0:6:1.39:0,1,26	0/0:7,0:7:11.19:0,11,82	0/0:29,0:29:84.06:0,84,791	0/0:21,0:21:63.08:0,63,598	0/0:18,0:18:48.06:0,48,458	1/1:5,22:27:66.16:759,66,0	0/0:19,0:19:54.04:0,54,507	0/0:28,0:28:75.10:0,75,717	0/0:25,0:24:69.09:0,69,658	0/0:17,0:17:51.08:0,51,492	0/0:21,0:21:51.05:0,51,481	0/0:10,0:10:30.05:0,30,289	0/0:19,0:19:48.02:0,48,446	0/0:14,0:14:42.07:0,42,405	0/0:37,0:37:99:0,102,977	0/0:17,0:17:48.01:0,48,446	1/1:0,20:20:60.16:710,60,0	1/1:2,20:22:54.12:634,54,0	1/1:1,18:19:48.15:579,48,0	0/0:21,0:21:51.05:0,51,483	0/0:20,0:20:45.05:0,45,428	0/0:24,0:24:60.08:0,60,573	0/0:15,0:15:42.05:0,42,400	0/0:26,0:26:66.07:0,66,624	1/1:3,28:31:72.22:869,72,0	0/0:14,0:14:39:0,39,360
chr10	49747603	.	AT	A	4011.03	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=9.370;DP=576;FS=0.000;HRun=1;HaplotypeScore=63.6727;InbreedingCoeff=0.9985;MQ=77.42;MQ0=0;MQRankSum=-1.716;QD=35.81;ReadPosRankSum=-1.766;VQSLOD=3.0795;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:93.32:0,93,1462	0/0:7,0:7:21.07:0,21,334	0/0:27,0:26:51.11:0,51,1010	0/0:20,0:19:54.14:0,54,778	0/0:31,0:31:93.28:0,93,1437	0/0:26,0:26:78.24:0,78,1195	0/0:14,0:14:42.14:0,42,669	1/1:0,26:26:75.22:1014,75,0	0/0:14,0:14:42.14:0,42,671	0/0:27,0:27:78.25:0,78,1225	0/0:22,0:22:66.23:0,66,1054	0/0:22,0:22:66.19:0,66,1001	0/0:11,0:11:33.10:0,33,503	0/0:17,0:17:51.09:0,51,757	0/0:23,0:23:69.22:0,69,1058	0/0:17,0:17:51.15:0,51,769	0/0:22,0:22:63.21:0,63,979	0/0:8,0:8:24.08:0,24,383	1/1:0,17:17:39.12:525,39,0	1/1:0,21:21:54.18:754,54,0	1/1:0,30:29:75.25:1047,75,0	0/0:15,0:15:45.15:0,45,719	0/0:26,0:26:78.25:0,78,1223	0/0:27,0:27:81.25:0,81,1246	0/0:18,0:18:54.17:0,54,836	0/0:25,0:25:75.14:0,75,1100	1/1:0,18:18:48.16:670,48,0	0/0:12,0:12:36.12:0,36,574
chr10	49747708	.	C	CT	4400.33	PASS	AB=0.667;AC=27;AF=0.482;AN=56;BaseQRankSum=-3.230;DP=555;FS=17.161;HRun=10;HaplotypeScore=108.2985;InbreedingCoeff=0.8955;MQ=57.97;MQ0=5;MQRankSum=0.495;QD=16.67;ReadPosRankSum=1.210;VQSLOD=3.9641;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,1:32:21.92:0,22,386	0/0:11,0:11:32.95:0,33,269	0/0:22,0:13:25.24:0,25,186	0/0:21,0:9:2.37:0,2,91	1/1:8,10:18:2.42:229,2,0	0/0:21,0:20:44.86:0,45,366	0/0:13,0:13:23.91:0,24,191	0/0:33,0:33:62.82:0,63,512	0/0:26,0:26:50.87:0,51,416	1/1:10,11:21:35.37:357,35,0	1/1:7,16:23:30.33:506,30,0	1/1:8,14:22:11.43:319,11,0	1/1:7,14:21:22.02:420,22,0	1/1:6,11:16:33.96:319,34,0	0/0:26,0:25:65.80:0,66,530	0/0:23,0:23:44.87:0,45,361	1/1:8,12:20:27.07:288,27,0	1/1:2,7:10:17.20:218,17,0	0/0:18,0:18:29.94:0,30,245	0/0:17,0:19:35.08:0,35,279	0/0:12,0:12:11.57:0,12,98	1/1:4,7:11:21.05:224,21,0	1/1:7,8:14:24.44:236,24,0	1/1:10,19:27:48.58:504,49,0	1/1:15,14:29:36.01:367,36,0	0/1:8,8:16:0.59:198,0,1	0/0:13,0:13:26.93:0,27,222	1/1:5,6:11:21.03:215,21,0
chr10	49749001	.	C	CTT	6533.96	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=3.354;DP=706;FS=10.529;HRun=1;HaplotypeScore=95.1677;InbreedingCoeff=0.9989;MQ=71.47;MQ0=3;MQRankSum=-0.193;QD=42.15;ReadPosRankSum=-1.544;VQSLOD=3.6101;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:90.08:0,90,1164	0/0:8,0:8:21.07:0,21,320	0/0:34,0:25:52.94:0,53,703	0/0:40,0:26:68.41:0,68,833	0/0:30,0:30:84.07:0,84,1074	0/0:11,0:11:33.08:0,33,461	0/0:22,0:22:59.93:0,60,778	1/1:5,28:33:90.18:1348,90,0	0/0:22,0:22:66.17:0,66,958	0/0:21,0:21:54.16:0,54,749	0/0:16,0:16:45.10:0,45,602	0/0:25,0:25:72.17:0,72,1031	0/0:27,0:27:81.19:0,81,1184	0/0:29,0:29:81.12:0,81,1095	0/0:26,0:26:75.17:0,75,1018	0/0:38,0:38:99:0,111,1527	0/0:18,0:18:45.12:0,45,641	0/0:17,0:17:42.07:0,42,566	1/1:10,16:26:46.76:1090,47,0	1/1:1,22:23:59.91:893,60,0	1/1:4,40:44:99:1910,99,0	0/0:25,0:25:72.15:0,72,988	0/0:22,0:21:63.14:0,63,888	0/0:19,0:19:54.13:0,54,755	0/0:22,0:22:66.10:0,66,911	0/0:31,0:31:81.20:0,81,1070	1/1:0,27:27:69.03:1293,69,0	0/0:12,0:12:36.12:0,36,549
chr10	49749697	.	A	AAAAGAGCAGCC	12672.64	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=2.161;DP=668;FS=2.442;HRun=0;HaplotypeScore=212.9799;InbreedingCoeff=0.9992;MQ=74.66;MQ0=0;MQRankSum=-14.162;QD=114.17;ReadPosRankSum=-5.305;VQSLOD=3.6860;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,102,3413	0/0:9,0:9:24.08:0,24,780	0/0:17,0:17:32.92:0,33,986	0/0:17,0:17:35.47:0,35,737	0/0:26,0:26:75.26:0,75,2527	0/0:21,0:21:57.19:0,57,1769	0/0:28,0:28:72.25:0,72,2362	1/1:27,5:33:87.28:3747,87,0	0/0:25,0:25:72.25:0,72,2504	0/0:26,0:26:75.25:0,75,2531	0/0:19,0:19:57.18:0,57,1821	0/0:26,0:26:75.26:0,75,2491	0/0:27,0:27:78.27:0,78,2677	0/0:28,0:28:81.28:0,81,2799	0/0:27,0:27:81.28:0,81,2781	0/0:19,0:19:54.19:0,54,1794	0/0:37,0:37:99:0,105,3425	0/0:32,0:32:90.31:0,90,3033	1/1:17,5:24:72.24:3192,72,0	1/1:13,10:23:45.15:2373,45,0	1/1:8,9:20:39.13:1914,39,0	0/0:27,0:27:75.26:0,75,2602	0/0:17,0:17:51.18:0,51,1720	0/0:28,0:28:72.24:0,72,2335	0/0:26,0:26:78.27:0,78,2490	0/0:24,0:24:69.24:0,69,2257	1/1:3,7:11:27:1447,27,0	0/0:16,0:16:48.16:0,48,1567
chr10	49750490	.	C	CGTT	5042.01	PASS	AB=0.952;AC=11;AF=0.196;AN=56;BaseQRankSum=-12.466;DP=633;FS=0.898;HRun=0;HaplotypeScore=85.9363;InbreedingCoeff=0.8888;MQ=72.34;MQ0=0;MQRankSum=-0.056;QD=31.12;ReadPosRankSum=-1.595;VQSLOD=4.2585;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:54.16:0,54,753	0/0:10,0:10:24.08:0,24,344	0/0:29,0:29:50.64:0,51,656	0/0:25,0:24:48.16:0,48,671	0/0:18,0:18:48.15:0,48,669	0/0:31,0:31:84.27:0,84,1182	0/0:29,0:29:57.16:0,57,778	1/1:22,19:42:63.19:1181,63,0	0/0:26,0:26:54.16:0,54,754	0/0:19,0:19:45.15:0,45,643	0/0:18,0:18:39.13:0,39,556	0/0:20,0:20:48.15:0,48,669	0/0:17,0:17:42.14:0,42,601	0/0:19,0:19:42.14:0,42,601	0/0:25,0:25:66.19:0,66,923	0/0:22,0:22:48.16:0,48,687	0/0:22,0:22:36.58:0,37,691	0/0:12,0:12:27.09:0,27,387	1/1:12,10:23:36.10:680,36,0	1/1:5,13:19:39.13:792,39,0	1/1:10,16:27:31.46:974,31,0	0/0:13,0:13:30.09:0,30,412	0/1:19,1:20:15.52:16,0,553	0/0:22,0:22:57.09:0,57,772	0/0:28,0:28:41.93:0,42,571	0/0:21,0:21:45.10:0,45,620	1/1:4,27:31:69.24:1400,69,0	0/0:20,0:20:54.18:0,54,772
chr10	49752408	.	ATT	A	6434.75	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=13.843;DP=776;FS=1.481;HRun=3;HaplotypeScore=92.2059;InbreedingCoeff=1.0000;MQ=86.10;MQ0=1;MQRankSum=-1.817;QD=41.25;ReadPosRankSum=-0.256;VQSLOD=4.1810;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:75.26:0,75,1433	0/0:16,0:16:48.16:0,48,927	0/0:23,0:23:66.20:0,66,1185	0/0:29,0:29:77.71:0,78,1309	0/0:29,0:29:87.28:0,87,1602	0/0:30,0:30:90.29:0,90,1670	0/0:25,0:25:75.25:0,75,1417	1/1:1,40:41:99:1704,120,0	0/0:39,0:39:99:0,114,2195	0/0:48,0:47:99:0,144,2662	0/0:23,0:23:66.23:0,66,1269	0/0:23,0:23:63.22:0,63,1213	0/0:37,0:37:99:0,111,2074	0/0:32,0:32:96.32:0,96,1816	0/0:33,0:33:99:0,99,1882	0/0:32,0:32:93.30:0,93,1736	0/0:22,0:22:66.23:0,66,1266	0/0:22,0:22:63.22:0,63,1208	1/1:1,21:22:63.19:939,63,0	1/1:0,30:30:75.25:1148,75,0	1/1:0,34:34:93.32:1424,93,0	0/0:27,0:27:81.28:0,81,1546	0/0:26,0:26:78.26:0,78,1458	0/0:16,0:16:48.16:0,48,918	0/0:19,0:19:57.18:0,57,1041	0/0:31,0:31:90.29:0,90,1679	1/1:0,29:28:81.26:1220,81,0	0/0:13,0:13:39.13:0,39,753
chr10	49754328	.	C	CAG	6246.99	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-14.540;DP=621;FS=1.221;HRun=0;HaplotypeScore=72.2190;InbreedingCoeff=0.9994;MQ=80.08;MQ0=0;MQRankSum=-1.238;QD=49.19;ReadPosRankSum=-0.412;VQSLOD=5.5340;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,120,1723	0/0:8,0:8:24.06:0,24,333	0/0:22,0:23:54.80:0,55,837	0/0:22,0:22:65.78:0,66,890	0/0:23,0:23:69.20:0,69,975	0/0:19,0:19:54.18:0,54,791	0/0:15,0:15:42.13:0,42,592	1/1:0,27:27:81.27:1467,81,0	0/0:29,0:29:84.27:0,84,1213	0/0:20,0:20:60.20:0,60,860	0/0:19,0:19:54.18:0,54,794	0/0:17,0:17:48.15:0,48,687	0/0:17,0:17:48.16:0,48,706	0/0:18,0:18:51.16:0,51,732	0/0:25,0:25:72.23:0,72,1039	0/0:21,0:21:63.21:0,63,927	0/0:32,0:32:96.31:0,96,1393	0/0:18,0:18:54.18:0,54,793	1/1:1,14:15:42.12:754,42,0	1/1:3,22:26:63.22:1179,63,0	1/1:2,30:32:78.27:1461,78,0	0/0:24,0:24:66.22:0,66,970	0/0:19,0:19:54.17:0,54,776	0/0:25,0:25:75.24:0,75,1082	0/0:26,0:26:69.23:0,69,1015	0/0:22,0:22:66.20:0,66,934	1/1:3,24:26:75.26:1386,75,0	0/0:10,0:10:30.10:0,30,442
chr10	49756226	.	TTGTGTGTGTGTGTG	T	4369.03	PASS	AB=0.710;AC=17;AF=0.327;AN=52;BaseQRankSum=8.232;DP=480;FS=4.817;HRun=0;HaplotypeScore=163.9926;InbreedingCoeff=0.8146;MQ=51.92;MQ0=20;MQRankSum=-6.922;QD=35.52;ReadPosRankSum=0.424;VQSLOD=4.3162;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:37:39.11:0,39,2071	0/0:4,0:7:6.01:0,6,203	./.	./.	1/1:7,8:16:15.05:400,15,0	0/0:20,0:19:21.07:0,21,1213	0/0:19,0:18:27.09:0,27,1324	0/0:23,0:22:15.02:0,15,381	0/0:17,0:16:22.87:0,23,1018	1/1:4,9:13:26.67:818,27,0	1/1:6,7:13:12.04:292,12,0	0/0:8,0:8:15.05:0,15,736	0/0:16,0:16:30.10:0,30,1657	1/1:2,10:12:18.06:629,18,0	0/0:10,0:18:27.08:0,27,865	0/0:10,0:10:18.04:0,18,874	0/1:13,8:22:6.87:422,0,7	1/1:7,0:6:2.89:20,3,0	0/0:12,0:12:12.04:0,12,719	0/0:13,0:13:18.06:0,18,1061	0/0:18,0:18:30.08:0,30,1368	0/0:13,0:14:27.09:0,27,1592	0/0:14,0:14:21.07:0,21,1236	0/0:23,0:23:42.14:0,42,2379	1/1:2,12:14:27.09:933,27,0	1/1:10,7:18:23.68:496,24,0	0/0:22,0:24:50.98:0,51,2787	1/1:5,2:7:1.06:359,1,0
chr10	49756442	.	T	TCC	1197.27	PASS	AB=1.000;AC=33;AF=0.660;AN=50;BaseQRankSum=2.880;DP=221;FS=7.162;HRun=7;HaplotypeScore=38.6049;InbreedingCoeff=0.6629;MQ=81.11;MQ0=0;MQRankSum=-1.329;QD=9.73;ReadPosRankSum=-0.384;VQSLOD=-0.5488;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:80.87:0,81,827	0/0:3,0:3:2.67:0,3,11	0/0:15,0:13:17.83:0,18,273	0/1:13,0:11:0.56:1,0,196	1/1:3,5:9:8.46:77,8,0	0/0:5,0:5:12.03:0,12,133	0/0:16,0:16:36.87:0,37,368	1/1:8,0:8:5.76:39,6,0	0/0:7,0:7:16.78:0,17,135	1/1:6,0:6:8.65:57,9,0	1/1:7,3:10:17.94:222,18,0	1/1:6,0:7:4.65:43,5,0	1/1:3,0:4:4.30:61,4,0	1/1:0,9:10:8.52:105,9,0	0/0:9,0:9:20.79:0,21,218	0/0:7,0:7:12.03:0,12,139	1/1:3,2:5:11.71:159,12,0	1/1:0,5:5:3.01:48,3,0	./.	./.	1/1:3,0:10:3:29,3,0	1/1:5,0:5:2.32:19,2,0	1/1:3,0:5:3:29,3,0	1/1:2,1:3:5.98:69,6,0	1/1:5,1:6:15.04:216,15,0	1/1:4,0:4:9.01:112,9,0	1/1:4,0:12:8.86:87,9,0	./.
chr10	49756447	.	CCCG	C	285.25	PASS	AB=0.924;AC=15;AF=0.288;AN=52;BaseQRankSum=1.220;DP=216;FS=3.041;HRun=0;HaplotypeScore=41.8764;InbreedingCoeff=0.1771;MQ=79.71;MQ0=0;MQRankSum=-1.230;QD=4.32;ReadPosRankSum=-3.306;VQSLOD=0.6063;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:87.21:0,87,1471	0/0:2,0:2:6.02:0,6,87	0/0:16,0:13:7.96:0,8,498	0/0:14,0:11:16.04:0,16,324	0/1:7,0:7:9.98:10,0,67	0/0:5,0:5:15.04:0,15,261	0/0:19,0:19:46.89:0,47,823	1/1:4,3:7:8.10:98,8,0	0/0:7,0:7:17.19:0,17,235	1/1:4,0:4:5.79:38,6,0	0/1:10,0:10:9.49:9,0,126	0/1:7,0:7:34.03:34,0,109	0/1:3,1:4:55.05:83,0,55	0/1:10,0:10:18.73:19,0,67	0/0:9,0:9:21.95:0,22,409	0/0:6,0:6:15.04:0,15,273	0/0:5,0:5:8.89:0,9,109	0/0:5,0:5:3.01:0,3,36	0/0:3,0:3:6.01:0,6,70	./.	0/0:12,0:12:14.91:0,15,115	1/1:5,0:5:5.71:32,6,0	0/0:4,0:4:3.01:0,3,36	0/1:1,1:2:23.01:41,0,23	0/1:6,0:6:28.71:29,0,75	1/1:4,0:4:8.17:48,8,0	0/0:10,0:10:11.80:0,12,127	./.
chr10	49756924	.	TA	T	2633.84	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=13.742;DP=593;FS=8.362;HRun=8;HaplotypeScore=62.1786;InbreedingCoeff=0.9938;MQ=71.12;MQ0=0;MQRankSum=0.549;QD=22.32;ReadPosRankSum=-0.436;VQSLOD=3.8047;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:95.27:0,95,1087	0/0:7,0:7:18.05:0,18,207	0/0:7,0:7:18.04:0,18,195	0/0:8,0:8:18.05:0,18,205	0/0:29,0:29:87.27:0,87,1051	0/0:19,1:20:28.23:0,28,612	0/0:14,0:14:39.12:0,39,471	1/1:5,30:35:87.09:824,87,0	0/0:15,0:15:39.12:0,39,471	0/0:34,0:34:90.27:0,90,1078	0/0:27,0:27:78.21:0,78,911	0/0:17,0:17:51.16:0,51,615	0/0:22,0:22:57.17:0,57,689	0/0:19,0:19:48.15:0,48,580	0/0:26,0:25:69.21:0,69,834	0/0:22,0:22:60.16:0,60,702	0/0:19,0:19:54.17:0,54,652	0/0:28,0:28:71.42:0,71,828	1/1:2,10:12:30.05:290,30,0	1/1:3,23:26:66:623,66,0	1/1:0,13:13:30.05:290,30,0	0/0:26,0:26:72.21:0,72,859	0/0:15,0:15:42.13:0,42,504	0/0:12,0:12:33.10:0,33,399	0/0:31,0:31:78.23:0,78,930	0/0:28,0:28:72.19:0,72,846	1/1:3,29:32:81.13:782,81,0	0/0:12,0:12:33.10:0,33,399
chr10	49757527	.	G	GATGA	7870.59	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-3.506;DP=722;FS=0.384;HRun=0;HaplotypeScore=131.3039;InbreedingCoeff=0.9960;MQ=68.92;MQ0=2;MQRankSum=-7.363;QD=57.45;ReadPosRankSum=-4.208;VQSLOD=4.6369;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,111,1908	0/0:11,0:11:27.09:0,27,485	0/0:29,0:29:45.07:0,45,695	0/0:37,0:34:43.18:0,43,727	0/0:29,0:29:84.29:0,84,1510	0/0:29,0:29:66.23:0,66,1168	0/0:37,0:37:96.31:0,96,1668	1/1:10,17:29:69.22:1548,69,0	0/0:24,0:24:66.23:0,66,1183	0/0:26,0:26:75.25:0,75,1322	0/0:8,0:8:15.05:0,15,270	0/0:19,0:19:54.16:0,54,913	0/0:32,0:32:87.28:0,87,1523	0/0:13,0:13:36.12:0,36,641	0/0:31,0:31:90.31:0,90,1612	0/0:26,0:26:78.27:0,78,1402	0/0:36,0:36:90.27:0,90,1583	0/0:19,0:18:45.14:0,45,770	1/1:6,15:22:48.16:1170,48,0	1/1:5,18:24:69.12:1570,69,0	1/1:3,29:33:77.89:1908,78,0	0/0:16,0:16:48.15:0,48,834	0/0:21,0:21:60.19:0,60,1051	0/0:29,0:29:75.22:0,75,1288	0/0:19,0:19:45.15:0,45,809	0/0:28,0:28:75.26:0,75,1342	1/1:4,24:29:72.12:1675,72,0	0/0:21,0:21:63.18:0,63,1090
chr10	49757584	.	G	GTA	2645.68	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=1.496;DP=655;FS=9.083;HRun=0;HaplotypeScore=117.5981;InbreedingCoeff=0.9490;MQ=53.23;MQ0=34;MQRankSum=-0.519;QD=17.52;ReadPosRankSum=-3.317;VQSLOD=2.7020;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:24:27.69:0,28,178	0/0:6,0:6:9.58:0,10,69	0/0:29,0:9:13.11:0,13,164	0/0:23,0:6:14.92:0,15,158	0/0:19,0:19:33.02:0,33,367	0/0:31,0:30:48.03:0,48,574	0/0:32,0:29:61.97:0,62,693	1/1:28,14:40:76.39:989,76,0	0/0:24,0:21:50.14:0,50,671	0/0:22,0:22:54.29:0,54,634	0/0:8,0:8:9.50:0,10,133	0/0:19,0:19:47.83:0,48,621	0/0:23,0:22:59.97:0,60,672	0/0:24,0:24:44.54:0,45,497	0/0:29,0:28:14.90:0,15,138	0/0:18,0:18:9.72:0,10,67	0/0:28,0:26:68.52:0,69,713	0/0:19,0:16:41.16:0,41,498	1/1:27,0:25:36.80:555,37,0	1/1:30,1:30:32.08:434,32,0	1/1:28,0:24:41.94:407,42,0	0/0:14,0:13:24.04:0,24,300	0/0:22,0:22:42.11:0,42,553	0/0:30,0:28:56.84:0,57,680	0/0:16,0:16:17.70:0,18,195	0/0:27,0:26:71.74:0,72,779	1/1:23,0:22:26.18:435,26,0	0/0:15,0:13:32.74:0,33,361
chr10	49757603	.	TGAGAGAGA	T	883.02	PASS	AB=0.970;AC=13;AF=0.295;AN=44;BaseQRankSum=-0.966;DP=593;FS=62.106;HRun=0;HaplotypeScore=159.4991;InbreedingCoeff=0.0299;MQ=47.78;MQ0=29;MQRankSum=1.622;QD=4.00;ReadPosRankSum=-1.096;VQSLOD=0.1245;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:25:21.80:0,22,232	0/0:6,0:6:5.04:0,5,78	./.	./.	./.	0/0:23,0:26:7.43:0,7,113	0/0:25,0:22:6.47:0,6,153	0/0:32,0:30:8.21:0,8,71	0/0:24,0:21:10.85:0,11,181	0/1:17,0:22:20.58:166,0,21	1/1:7,0:10:2.04:6,2,0	0/1:22,0:21:13.41:13,0,152	0/0:22,0:21:20.92:0,21,296	./.	0/0:29,0:28:3.01:0,3,71	0/1:22,0:22:23.68:24,0,26	0/1:24,0:22:16.09:328,0,16	0/1:23,0:20:10.23:190,0,10	0/0:21,0:20:12.82:0,13,137	0/0:30,0:29:6.02:0,6,105	./.	0/0:14,0:17:3.01:0,3,41	1/1:24,0:24:3.01:38,3,0	0/1:28,0:26:26.82:27,0,226	0/0:11,7:18:0:0,0,0	1/1:16,3:18:7.32:217,7,0	0/1:26,0:25:3.15:3,0,259	./.
chr10	49757962	.	GT	G	3798.22	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=7.957;DP=624;FS=11.211;HRun=1;HaplotypeScore=61.5339;InbreedingCoeff=0.9992;MQ=73.79;MQ0=0;MQRankSum=-1.059;QD=34.22;ReadPosRankSum=-1.292;VQSLOD=1.9710;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,108,1439	0/0:10,0:10:30.02:0,30,381	0/0:19,0:18:49.70:0,50,647	0/0:17,1:17:35.62:0,36,466	0/0:20,0:20:57.08:0,57,731	0/0:22,0:22:66.19:0,66,902	0/0:19,0:19:57.18:0,57,796	1/1:11,11:22:63.03:703,63,0	0/0:13,0:13:39.11:0,39,536	0/0:23,0:23:69.22:0,69,957	0/0:19,0:19:51.11:0,51,683	0/0:25,0:25:75.21:0,75,1004	0/0:24,0:24:69.21:0,69,963	0/0:27,0:27:81.26:0,81,1116	0/0:26,0:26:78.19:0,78,1083	0/0:28,0:28:84.27:0,84,1175	0/0:50,0:49:99:0,147,2004	0/0:22,0:22:66.14:0,66,877	1/1:0,13:13:36.10:473,36,0	1/1:0,24:24:53.97:658,54,0	1/1:0,28:28:75.25:1045,75,0	0/0:10,0:10:30.09:0,30,410	0/0:14,0:14:42.13:0,42,580	0/0:33,0:33:99:0,99,1333	0/0:22,0:22:60.12:0,60,809	0/0:21,0:21:63.20:0,63,885	1/1:0,24:24:66.22:920,66,0	0/0:12,0:12:24.05:0,24,312
chr10	49760089	.	G	GCTATC	8590.46	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=14.191;DP=647;FS=1.823;HRun=0;HaplotypeScore=130.0544;InbreedingCoeff=0.9960;MQ=84.53;MQ0=0;MQRankSum=-15.103;QD=67.11;ReadPosRankSum=-3.420;VQSLOD=4.8558;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:87.28:0,87,1815	0/0:15,0:15:42.14:0,42,895	0/0:25,0:25:60.13:0,60,1149	0/0:24,0:24:54.01:0,54,1058	0/0:30,0:30:84.27:0,84,1730	0/0:35,0:35:99:0,102,2134	0/0:23,0:23:69.21:0,69,1378	1/1:24,15:39:93.32:2726,93,0	0/0:17,0:17:48.15:0,48,984	0/0:22,0:22:57.20:0,57,1215	0/0:12,0:12:33.11:0,33,689	0/0:21,0:21:60.18:0,60,1223	0/0:27,0:27:75.24:0,75,1557	0/0:20,0:20:60.21:0,60,1242	0/0:25,0:25:69.24:0,69,1471	0/0:22,0:22:60.21:0,60,1264	0/0:22,0:22:63.22:0,63,1343	0/0:18,0:18:45.15:0,45,959	1/1:12,12:24:66.19:1863,66,0	1/1:4,18:25:57.19:1712,57,0	1/1:3,9:13:15.05:468,15,0	0/0:22,0:22:60.19:0,60,1237	0/0:16,0:16:45.15:0,45,945	0/0:26,0:26:72.25:0,72,1534	0/0:28,0:28:84.27:0,84,1733	0/0:26,0:26:60.19:0,60,1229	1/1:12,14:27:62.93:1821,63,0	0/0:9,0:9:27.09:0,27,575
chr10	49760265	.	ATAT	A	6327.16	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=14.388;DP=669;FS=4.235;HRun=0;HaplotypeScore=97.6557;InbreedingCoeff=0.9994;MQ=85.31;MQ0=0;MQRankSum=-7.672;QD=46.52;ReadPosRankSum=-0.878;VQSLOD=6.4729;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:60.18:0,60,1364	0/0:9,0:9:24.08:0,24,568	0/0:25,0:25:58.21:0,58,1512	0/0:19,0:19:54.18:0,54,1211	0/0:27,0:27:81.28:0,81,1893	0/0:32,0:32:93.27:0,93,2057	0/0:21,0:21:63.22:0,63,1489	1/1:1,31:32:90.15:1492,90,0	0/0:22,0:22:63.16:0,63,1392	0/0:28,0:28:84.24:0,84,1861	0/0:29,0:29:84.29:0,84,1979	0/0:17,0:17:51.18:0,51,1203	0/0:23,0:23:69.24:0,69,1631	0/0:17,0:17:51.18:0,51,1189	0/0:31,0:31:90.24:0,90,1897	0/0:29,0:29:81.28:0,81,1915	0/0:16,0:16:48.16:0,48,1135	0/0:15,0:15:42.14:0,42,988	1/1:0,23:23:65.68:1034,66,0	1/1:0,30:30:87.16:1464,87,0	1/1:0,19:19:51:828,51,0	0/0:31,0:31:93.31:0,93,2149	0/0:30,0:30:84.29:0,84,1986	0/0:24,0:24:72.25:0,72,1671	0/0:29,0:29:81.28:0,81,1912	0/0:29,0:29:84.29:0,84,1983	1/1:0,32:32:90.14:1509,90,0	0/0:10,0:10:30.10:0,30,709
chr10	49760353	.	TC	T	1622.46	PASS	AB=0.950;AC=22;AF=0.393;AN=56;BaseQRankSum=-0.134;DP=466;FS=14.022;HRun=11;HaplotypeScore=69.0518;InbreedingCoeff=0.2278;MQ=73.42;MQ0=3;MQRankSum=-1.154;QD=5.43;ReadPosRankSum=3.722;VQSLOD=0.5197;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,0:20:24.83:86,25,0	1/1:1,4:5:5.99:49,6,0	0/1:17,1:16:14.49:14,0,70	0/1:11,0:8:6.83:7,0,25	0/1:10,0:13:30.42:30,0,52	0/1:11,10:21:22.42:101,0,22	1/1:2,26:28:65.41:526,65,0	0/1:23,0:23:46.53:47,0,68	1/1:4,11:16:28.99:227,29,0	0/0:7,0:7:2.02:0,2,58	0/0:15,0:15:16.88:0,17,129	0/0:13,0:13:18.38:0,18,239	0/0:16,0:16:20.09:0,20,329	0/0:10,0:10:11.07:0,11,148	1/1:6,20:26:56.92:465,57,0	1/1:3,0:25:38.70:112,39,0	0/1:30,3:33:27.67:28,0,613	0/0:10,0:10:11.55:0,12,144	0/1:12,0:12:1.13:1,0,28	0/1:23,0:23:82.53:83,0,125	0/1:14,0:14:15.76:16,0,41	0/0:14,0:14:35.69:0,36,288	0/0:10,1:11:5.79:0,6,214	0/0:21,0:21:49.70:0,50,460	0/0:20,0:20:41.82:0,42,369	0/0:13,0:13:20.78:0,21,162	0/0:17,0:17:22.28:0,22,106	0/1:7,0:7:16.92:17,0,33
chr10	49761061	.	T	TATGC	4306.12	PASS	AB=1.000;AC=11;AF=0.204;AN=54;BaseQRankSum=7.924;DP=923;FS=4.392;HRun=0;HaplotypeScore=198.6619;InbreedingCoeff=0.9382;MQ=56.91;MQ0=6;MQRankSum=-7.365;QD=20.03;ReadPosRankSum=-3.970;VQSLOD=3.7274;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:72.13:0,72,1034	0/0:12,0:12:26.38:0,26,431	./.	0/1:20,0:9:0.58:1,0,14	0/0:39,0:39:99:0,99,1411	0/0:32,0:32:72.16:0,72,1052	0/0:31,0:31:72.22:0,72,1141	1/1:46,0:44:86.79:808,87,0	0/0:41,0:41:99:0,108,1635	0/0:48,0:48:99:0,117,1695	0/0:29,0:29:78.16:0,78,1121	0/0:33,0:33:75.09:0,75,980	0/0:43,0:43:99:0,102,1591	0/0:41,0:41:96.15:0,96,1297	0/0:48,0:48:99:0,120,1818	0/0:34,0:34:86.54:0,87,1209	0/0:19,0:19:54.08:0,54,773	0/0:26,0:26:42.04:0,42,593	1/1:20,3:20:41.77:508,42,0	1/1:20,16:37:74.60:912,75,0	1/1:46,1:47:65.78:726,66,0	0/0:43,0:43:99:0,114,1784	0/0:27,0:27:63.12:0,63,878	0/0:23,0:23:48.08:0,48,669	0/0:37,0:37:96.22:0,96,1411	0/0:28,0:28:72.17:0,72,1052	1/1:29,13:42:86.89:1351,87,0	0/0:20,0:20:41.97:0,42,542
chr10	49761100	.	ATG	A	3120.99	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=11.029;DP=903;FS=0.378;HRun=0;HaplotypeScore=176.3505;InbreedingCoeff=0.9816;MQ=58.65;MQ0=4;MQRankSum=-5.587;QD=20.67;ReadPosRankSum=-4.736;VQSLOD=2.9067;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:76.59:0,77,1282	0/0:12,0:12:33.11:0,33,547	0/0:38,0:26:78.23:0,78,1239	0/0:30,0:23:57.18:0,57,874	0/0:35,0:35:96.51:0,97,904	0/0:33,0:33:90.31:0,90,1505	0/0:30,0:30:75.18:0,75,1186	1/1:12,13:25:45.08:541,45,0	0/0:43,0:43:99:0,111,1829	0/0:44,0:44:61.63:0,62,871	0/0:33,0:33:41.51:0,42,764	0/0:32,0:32:35.33:0,35,673	0/0:38,0:38:50.50:0,50,826	0/0:38,0:38:77.33:0,77,908	0/0:43,0:43:99:0,111,1819	0/0:35,0:35:90.27:0,90,1448	0/0:22,0:22:10.27:0,10,423	0/0:21,0:21:18.93:0,19,350	1/1:9,11:20:36.11:455,36,0	1/1:8,36:44:81.26:1012,81,0	1/1:6,23:29:33.57:421,34,0	0/0:50,0:50:79.50:0,79,1120	0/0:35,0:35:12.60:0,13,651	0/0:15,0:16:38.98:0,39,363	0/0:30,0:30:77.94:0,78,700	0/0:28,0:28:48.53:0,49,640	1/1:4,29:33:69.22:867,69,0	0/0:20,0:18:33.06:0,33,346
chr10	49762355	.	T	TTGTGTGTG	5229.78	PASS	AB=0.823;AC=28;AF=0.519;AN=54;BaseQRankSum=-0.519;DP=733;FS=2.172;HRun=0;HaplotypeScore=171.1393;InbreedingCoeff=0.7772;MQ=55.12;MQ0=11;MQRankSum=-3.953;QD=13.84;ReadPosRankSum=-2.589;VQSLOD=3.6337;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:30:51.10:0,51,1052	0/0:12,0:15:29.75:0,30,573	./.	0/1:27,0:14:0:0,0,0	1/1:19,1:20:27.06:560,27,0	0/0:19,0:20:29.43:0,29,771	0/0:24,0:26:39.04:0,39,757	0/0:34,0:34:0.42:0,0,342	0/0:22,0:27:42.13:0,42,846	1/1:13,18:32:44.88:849,45,0	1/1:9,13:24:5.36:245,5,0	1/1:7,0:21:12.04:257,12,0	1/1:9,0:21:9.01:135,9,0	1/1:6,20:29:18.05:410,18,0	0/0:15,0:16:39.11:0,39,822	0/0:19,0:22:27.07:0,27,539	1/1:11,17:30:9.03:311,9,0	1/1:10,7:18:6.02:247,6,0	0/0:20,0:19:17.73:0,18,312	0/0:27,0:25:2.53:0,3,597	0/0:64,0:68:54.46:0,54,1594	1/1:22,0:23:14.65:134,15,0	1/1:12,0:17:1.47:64,1,0	0/1:14,0:30:1.17:123,0,1	1/1:8,21:33:24.06:615,24,0	1/1:14,17:38:49.12:783,49,0	0/0:20,0:21:25.83:0,26,745	1/1:5,6:12:12.04:494,12,0
chr10	49763988	.	ATTCAGGAGGAAAC	A	7150.20	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=13.647;DP=596;FS=6.307;HRun=0;HaplotypeScore=212.8528;InbreedingCoeff=0.9690;MQ=71.86;MQ0=0;MQRankSum=-7.336;QD=56.30;ReadPosRankSum=-0.491;VQSLOD=4.0090;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:90.13:0,90,4846	0/0:3,0:3:9.03:0,9,353	0/0:19,0:18:51.17:0,51,2421	0/0:10,0:10:27.09:0,27,1055	0/0:35,0:35:99:0,102,5840	0/0:24,0:24:72.21:0,72,4229	0/0:15,0:15:45.15:0,45,2658	1/1:4,26:30:77.88:1556,78,0	0/0:16,0:16:48.16:0,48,2896	0/0:27,0:27:81.27:0,81,4447	0/0:25,0:25:75.24:0,75,4208	0/0:20,0:20:60.19:0,60,3367	0/0:29,0:29:87.28:0,87,5292	0/0:12,0:12:36.12:0,36,2062	0/0:21,0:21:57.20:0,57,3262	0/0:25,0:25:75.26:0,75,4613	0/0:15,0:14:45.13:0,45,2417	0/0:5,0:5:15.05:0,15,718	1/1:5,14:19:41.96:1022,42,0	1/1:2,27:29:62.98:1904,63,0	1/1:2,9:11:9.03:340,9,0	0/0:24,0:24:72.25:0,72,4649	0/0:30,0:30:90.31:0,90,5498	0/0:14,0:14:42.14:0,42,2586	0/0:20,0:20:60.21:0,60,3715	0/0:36,0:36:99:0,105,6021	1/1:4,34:38:57.15:2327,57,0	0/0:12,0:12:36.07:0,36,1723
chr10	49765225	.	GC	G	4036.98	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=11.182;DP=533;FS=0.405;HRun=1;HaplotypeScore=52.5069;InbreedingCoeff=0.9771;MQ=67.56;MQ0=0;MQRankSum=-0.123;QD=37.04;ReadPosRankSum=-3.968;VQSLOD=2.3216;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:57.19:0,57,895	0/0:8,0:8:24.08:0,24,378	0/0:5,0:5:7.96:0,8,43	0/0:6,0:6:15.01:0,15,185	0/0:30,0:30:90.27:0,90,1379	0/0:29,0:29:81.24:0,81,1238	0/0:21,0:21:63.19:0,63,951	1/1:0,39:39:99:1507,117,0	0/0:14,0:14:42.12:0,42,616	0/0:19,0:19:57.09:0,57,784	0/0:26,0:26:78.22:0,78,1161	0/0:15,0:15:45.11:0,45,646	0/0:23,0:23:66.21:0,66,1015	0/0:19,0:19:51.07:0,51,772	0/0:18,0:18:48.15:0,48,738	0/0:28,0:28:78.26:0,78,1217	0/0:25,0:25:72.13:0,72,1037	0/0:6,0:6:18.01:0,18,257	1/1:0,11:11:33.11:460,33,0	1/1:7,24:31:72.40:1111,72,0	1/1:0,11:11:33.11:459,33,0	0/0:19,0:19:57.15:0,57,818	0/0:24,0:24:72.08:0,72,1065	0/0:12,0:12:33.11:0,33,525	0/0:25,0:25:75.19:0,75,1100	0/0:23,0:23:69.23:0,69,1075	1/1:0,17:17:36.05:500,36,0	0/0:10,0:10:30.10:0,30,476
chr10	49765330	.	CAT	C	3139.61	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=10.380;DP=539;FS=9.172;HRun=0;HaplotypeScore=64.8474;InbreedingCoeff=0.9964;MQ=75.91;MQ0=0;MQRankSum=-1.727;QD=28.28;ReadPosRankSum=-0.509;VQSLOD=3.9614;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:72.20:0,72,1175	0/0:9,0:9:24.08:0,24,408	0/0:19,0:19:48.14:0,48,755	0/0:9,0:9:18.03:0,18,256	0/0:37,0:37:93.27:0,93,1495	0/0:26,0:26:72.23:0,72,1201	0/0:15,0:15:39.12:0,39,631	1/1:3,28:31:84.23:1046,84,0	0/0:12,0:12:36.12:0,36,617	0/0:16,0:16:45.15:0,45,770	0/0:35,0:35:93.30:0,93,1565	0/0:19,0:19:54.18:0,54,921	0/0:14,0:14:39.12:0,39,640	0/0:13,0:13:39.13:0,39,651	0/0:28,0:28:66.21:0,66,1101	0/0:15,0:15:36.11:0,36,591	0/0:20,0:20:57.13:0,57,892	0/0:8,0:8:24.05:0,24,380	1/1:5,17:22:51.15:654,51,0	1/1:3,20:23:45.15:591,45,0	1/1:1,12:13:30.10:394,30,0	0/0:17,0:17:51.15:0,51,820	0/0:17,0:17:48.15:0,48,796	0/0:12,0:12:24.08:0,24,411	0/0:20,0:20:57.15:0,57,896	0/0:27,0:27:75.26:0,75,1273	1/1:3,19:22:48.16:630,48,0	0/0:13,0:13:39.13:0,39,662
chr10	49765495	.	TA	T	2082.11	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=9.454;DP=361;FS=10.601;HRun=8;HaplotypeScore=37.5515;InbreedingCoeff=0.9091;MQ=66.11;MQ0=0;MQRankSum=1.034;QD=22.63;ReadPosRankSum=0.365;VQSLOD=3.0569;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:60.14:0,60,704	0/0:7,0:7:21.06:0,21,253	0/0:4,0:3:8.44:0,8,59	0/0:4,0:4:8.99:0,9,77	0/0:23,0:23:69.19:0,69,811	0/0:9,0:9:21.06:0,21,252	0/0:6,0:6:15.02:0,15,167	1/1:6,29:35:78.10:748,78,0	0/0:14,0:14:33.09:0,33,386	0/0:11,0:10:30.09:0,30,362	0/0:14,0:14:36.07:0,36,418	0/0:12,0:12:27.08:0,27,326	0/0:14,0:14:33.10:0,33,399	0/0:12,0:12:30.08:0,30,350	0/0:25,0:25:63.15:0,63,743	0/0:8,0:8:18.05:0,18,207	0/0:10,0:10:26.90:0,27,325	0/0:12,0:11:27.08:0,27,326	1/1:0,9:9:27.04:260,27,0	1/1:1,17:18:51.08:492,51,0	1/1:2,4:6:12.02:116,12,0	0/0:2,0:2:6.02:0,6,72	0/0:11,0:11:33.10:0,33,398	0/0:3,0:3:6.02:0,6,72	0/0:14,0:14:42.12:0,42,497	0/0:20,0:20:48.14:0,48,569	1/1:0,24:24:66.11:637,66,0	0/0:11,0:11:18.06:0,18,217
chr10	49765794	.	TCACACACACACACACACA	T	962.65	PASS	AC=6;AF=0.120;AN=50;BaseQRankSum=1.871;DP=321;FS=15.833;HRun=0;HaplotypeScore=134.0472;InbreedingCoeff=0.5276;MQ=62.87;MQ0=16;MQRankSum=-0.822;QD=15.04;ReadPosRankSum=-2.221;VQSLOD=1.0257;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:18:9.03:0,9,487	0/0:4,0:7:9.02:0,9,187	0/0:30,0:16:8.99:0,9,119	0/0:33,0:14:2.99:0,3,23	0/0:5,0:5:3.01:0,3,162	0/0:10,0:10:12.02:0,12,736	0/0:11,0:10:18.06:0,18,1248	1/1:29,0:28:9.02:157,9,0	0/0:7,0:7:15.05:0,15,787	0/0:6,0:6:12.04:0,12,469	0/0:6,0:6:6.49:0,6,322	0/0:6,0:6:3.01:0,3,48	0/0:3,0:3:3.01:0,3,239	0/0:2,0:3:3.01:0,3,102	0/0:8,0:9:6.02:0,6,197	0/0:13,0:17:6.02:0,6,206	0/0:14,0:16:27.09:0,27,1388	0/0:10,0:12:18.06:0,18,605	1/1:13,3:16:9:107,9,0	./.	./.	./.	0/0:7,0:6:12.04:0,12,767	0/0:9,0:9:9.03:0,9,528	0/0:8,0:8:12.04:0,12,550	0/0:7,0:7:6.02:0,6,170	1/1:11,7:19:17.87:822,18,0	0/0:10,0:10:12.04:0,12,398
chr10	49765833	.	C	CAT	317.24	PASS	AB=0.973;AC=11;AF=0.229;AN=48;BaseQRankSum=3.382;DP=292;FS=0.837;HRun=0;HaplotypeScore=75.5256;InbreedingCoeff=0.0145;MQ=44.77;MQ0=25;MQRankSum=1.385;QD=3.52;ReadPosRankSum=-0.040;VQSLOD=2.0786;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:27:38.54:0,39,321	0/0:5,0:5:5.96:0,6,45	./.	./.	1/1:6,0:6:2.99:24,3,0	0/0:9,0:8:14.99:0,15,134	0/0:9,0:7:15.03:0,15,184	0/0:28,0:25:57.57:0,58,446	0/0:6,0:6:18.01:0,18,205	0/1:9,0:8:23.26:71,0,23	1/1:7,0:6:5.96:45,6,0	0/0:5,0:5:3:0,3,25	0/0:7,0:6:0.91:0,1,99	0/0:1,0:1:2.60:0,3,10	0/0:12,0:15:11.49:0,11,86	0/0:13,0:13:17.96:0,18,144	0/1:13,4:17:27.52:28,0,83	0/1:13,0:13:27.74:159,0,28	0/0:8,0:7:20.94:0,21,174	0/0:14,0:11:14.97:0,15,125	./.	./.	0/1:12,0:9:9.76:10,0,29	0/0:9,0:7:4.55:0,5,29	0/1:8,0:8:25.58:38,0,26	0/1:7,0:6:28.97:44,0,29	0/0:24,0:23:27.37:0,27,332	0/1:11,0:9:7.95:33,0,8
chr10	49765993	.	AGAATCACTTGGGGAAG	A	4045.19	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=5.726;DP=420;FS=19.162;HRun=0;HaplotypeScore=178.1139;InbreedingCoeff=0.9781;MQ=68.28;MQ0=1;MQRankSum=-6.756;QD=69.74;ReadPosRankSum=-0.810;VQSLOD=1.5347;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:27:81.28:0,81,5779	0/0:6,0:6:15.05:0,15,926	0/0:21,0:19:44.98:0,45,2180	0/0:23,0:23:66.23:0,66,3834	0/0:12,0:12:30.09:0,30,1885	0/0:21,0:21:63.19:0,63,4320	0/0:16,0:16:42.14:0,42,2976	1/1:10,14:24:42.11:1397,42,0	0/0:10,0:10:27.09:0,27,1852	0/0:14,0:14:42.14:0,42,2813	0/0:11,0:11:30.09:0,30,1976	0/0:10,0:10:24.07:0,24,1672	0/0:20,0:20:54.19:0,54,3938	0/0:15,0:15:39.13:0,39,2679	0/0:22,0:22:63.22:0,63,4790	0/0:24,0:24:66.23:0,66,4804	0/0:15,0:15:45.15:0,45,3221	0/0:5,0:5:15.05:0,15,972	1/1:2,6:8:18.06:703,18,0	1/1:2,5:7:15.05:694,15,0	1/1:10,0:10:24.08:695,24,0	0/0:12,0:12:27.09:0,27,1665	0/0:19,0:19:57.20:0,57,3585	0/0:14,0:14:42.14:0,42,2977	0/0:16,0:16:48.16:0,48,3210	0/0:14,0:14:42.14:0,42,3172	1/1:3,6:9:12.04:556,12,0	0/0:14,0:14:36.12:0,36,2422
chr10	49765996	.	A	ATC	1085.50	PASS	AB=1.000;AC=6;AF=0.107;AN=56;BaseQRankSum=7.178;DP=408;FS=5.123;HRun=0;HaplotypeScore=65.2728;InbreedingCoeff=0.5947;MQ=68.26;MQ0=1;MQRankSum=-5.902;QD=24.12;ReadPosRankSum=-3.407;VQSLOD=3.1682;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:27:81.27:0,81,1192	0/0:5,0:5:15.05:0,15,221	0/0:17,0:15:41.76:0,42,543	0/0:23,0:23:66.21:0,66,926	0/0:12,0:12:33.05:0,33,441	0/0:21,0:21:63.19:0,63,889	0/0:15,0:15:42.14:0,42,604	1/1:21,0:21:11.27:611,11,0	0/0:9,0:9:27.09:0,27,398	0/0:14,0:14:42.14:0,42,619	0/0:11,0:11:27.07:0,27,377	0/0:9,0:9:24.07:0,24,334	0/0:19,0:19:54.18:0,54,795	0/0:14,0:14:42.13:0,42,599	0/0:22,0:22:63.21:0,63,928	0/0:25,0:25:69.23:0,69,1014	0/0:17,0:17:51.15:0,51,728	0/0:7,0:7:18.03:0,18,243	0/1:8,0:8:28.71:130,0,29	0/1:7,0:7:20.10:42,0,20	1/1:0,9:9:24.08:434,24,0	0/0:10,0:10:27.09:0,27,398	0/0:19,0:19:57.15:0,57,814	0/0:15,0:15:45.15:0,45,662	0/0:16,0:16:48.12:0,48,682	0/0:15,0:15:45.14:0,45,645	0/0:8,0:8:10.98:0,11,49	0/0:12,0:12:36.12:0,36,523
chr10	49766184	.	G	GCCAC	427.67	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-1.203;DP=473;FS=14.594;HRun=0;HaplotypeScore=86.7328;InbreedingCoeff=0.7980;MQ=72.92;MQ0=0;MQRankSum=-1.536;QD=19.44;ReadPosRankSum=-2.005;VQSLOD=1.8089;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:72.19:0,72,1183	0/0:6,0:6:18.06:0,18,290	0/0:13,0:13:11.82:0,12,199	0/0:20,0:19:27.08:0,27,411	0/0:15,0:15:27.06:0,27,402	0/0:24,0:24:51.17:0,51,854	0/0:29,0:29:60.18:0,60,941	1/1:2,4:6:15.04:319,15,0	0/0:32,0:32:81.21:0,81,1308	0/0:15,0:15:42.10:0,42,656	0/0:15,0:15:33.10:0,33,528	0/0:20,0:20:57.14:0,57,918	0/0:20,0:20:51.17:0,51,859	0/0:23,0:23:60.19:0,60,987	0/0:19,0:19:30.03:0,30,473	0/0:15,0:15:36.07:0,36,576	0/0:28,0:28:78.27:0,78,1310	0/0:5,0:5:15.05:0,15,253	1/1:4,0:4:3.01:74,3,0	1/1:0,1:3:3.01:73,3,0	1/1:6,0:6:3:26,3,0	0/0:17,0:17:33.04:0,33,518	0/0:8,0:8:21.06:0,21,329	0/0:34,0:34:81.17:0,81,1240	0/0:9,0:9:21.05:0,21,304	0/0:19,0:19:48.16:0,48,787	1/1:2,1:3:3.01:75,3,0	0/0:27,0:26:72.17:0,72,1154
chr10	49766353	.	T	TGGATTGTAAGCTAAAATA	42091.49	PASS	AB=0.938;AC=52;AF=0.929;AN=56;BaseQRankSum=-9.228;DP=383;FS=4.108;HRun=0;HaplotypeScore=537.3369;InbreedingCoeff=0.1411;MQ=63.70;MQ0=0;MQRankSum=-0.370;QD=110.19;ReadPosRankSum=0.631;VQSLOD=4.4916;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:19:30.23:2302,30,0	1/1:10,0:10:26.42:1433,26,0	1/1:4,1:12:33.11:1582,33,0	0/1:6,0:7:30.93:363,0,31	1/1:16,0:16:26.41:938,26,0	1/1:18,0:18:32.53:1916,33,0	1/1:10,0:10:7.87:968,8,0	1/1:11,0:11:30.10:1477,30,0	1/1:27,0:27:28.99:3299,29,0	1/1:23,0:23:5.09:2293,5,0	1/1:11,0:11:28.64:1183,29,0	1/1:20,0:20:28.06:2822,28,0	1/1:17,0:17:28.60:1813,29,0	0/1:16,0:16:14.85:1541,0,15	1/1:28,0:28:36.98:4365,37,0	1/1:14,0:14:24.67:1084,25,0	1/1:6,0:6:1.99:307,2,0	0/0:1,0:1:1.55:0,2,4	1/1:7,0:7:7.33:333,7,0	1/1:12,0:12:22.80:1520,23,0	1/1:6,0:6:14.71:673,15,0	1/1:16,0:16:18.16:1858,18,0	1/1:18,0:18:37.57:2351,38,0	1/1:7,0:7:5.16:181,5,0	1/1:21,0:21:30.73:2361,31,0	1/1:10,0:10:20.04:1253,20,0	1/1:12,0:11:26.86:1275,27,0	1/1:8,0:8:10.52:601,11,0
chr10	49766418	.	A	AACATGT	7588.45	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=1.275;DP=566;FS=48.653;HRun=0;HaplotypeScore=151.4828;InbreedingCoeff=0.9869;MQ=65.67;MQ0=3;MQRankSum=-4.653;QD=82.48;ReadPosRankSum=-1.712;VQSLOD=3.3232;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:41.95:0,42,729	0/0:12,0:12:26.72:0,27,501	0/0:16,0:10:19.21:0,19,631	0/0:13,0:11:31.58:0,32,593	0/0:29,0:29:21.59:0,22,537	0/0:25,0:25:66.06:0,66,1328	0/0:22,0:22:47.66:0,48,890	1/1:4,11:17:45.08:1395,45,0	0/0:26,0:25:56.46:0,56,955	0/0:15,0:15:45.15:0,45,1037	0/0:28,0:28:41.53:0,42,903	0/0:31,0:31:70.77:0,71,1457	0/0:31,0:30:59.19:0,59,972	0/0:33,0:32:68.06:0,68,1022	0/0:34,0:34:80.57:0,81,1108	0/0:25,0:25:55.18:0,55,1295	0/0:13,0:13:29.95:0,30,503	0/0:8,0:8:24.05:0,24,514	1/1:8,8:16:48.15:1639,48,0	1/1:3,13:16:35.94:926,36,0	1/1:1,8:9:18.06:540,18,0	0/0:22,0:22:50.23:0,50,599	0/0:15,0:15:26.53:0,27,395	0/0:19,0:19:12.36:0,12,159	0/0:20,0:20:44.51:0,45,733	0/0:12,0:12:30.61:0,31,788	1/1:5,29:33:99:3089,99,0	0/0:7,0:7:21.07:0,21,504
chr10	49766472	.	AAAG	A	4428.80	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=8.333;DP=617;FS=13.073;HRun=0;HaplotypeScore=112.5574;InbreedingCoeff=0.9977;MQ=77.74;MQ0=3;MQRankSum=-5.436;QD=43.85;ReadPosRankSum=0.495;VQSLOD=5.6713;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:78.27:0,78,1796	0/0:12,0:12:36.12:0,36,830	0/0:18,0:18:48.16:0,48,1053	0/0:20,0:20:60.17:0,60,1159	0/0:37,0:37:96.33:0,96,2207	0/0:24,0:24:69.24:0,69,1483	0/0:21,0:21:57.18:0,57,1211	1/1:2,19:21:57.16:889,57,0	0/0:25,0:24:63.22:0,63,1424	0/0:26,0:26:78.27:0,78,1738	0/0:32,0:32:87.30:0,87,1972	0/0:30,0:30:81.28:0,81,1821	0/0:27,0:26:78.27:0,78,1746	0/0:24,0:23:60.20:0,60,1283	0/0:31,0:31:90.31:0,90,2048	0/0:22,0:22:60.20:0,60,1269	0/0:21,0:21:60.21:0,60,1348	0/0:10,0:10:30.10:0,30,692	1/1:3,13:16:45.14:737,45,0	1/1:0,11:11:27.09:460,27,0	1/1:1,24:25:60.21:1023,60,0	0/0:19,0:19:54.18:0,54,1212	0/0:23,0:23:69.24:0,69,1552	0/0:19,0:19:51.17:0,51,1076	0/0:25,0:25:66.23:0,66,1495	0/0:17,0:17:51.17:0,51,1112	1/1:2,26:27:78.27:1320,78,0	0/0:6,0:6:18.06:0,18,415
chr10	49767495	.	T	TC	4998.98	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-9.015;DP=574;FS=0.000;HRun=2;HaplotypeScore=60.0137;InbreedingCoeff=0.9969;MQ=81.03;MQ0=0;MQRankSum=1.777;QD=34.24;ReadPosRankSum=-1.583;VQSLOD=4.2886;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:78.16:0,78,886	0/0:7,0:7:18.06:0,18,222	0/0:19,0:19:39.26:0,39,416	0/0:18,0:18:29.56:0,30,378	0/0:25,0:25:72.18:0,72,847	0/0:23,0:23:69.20:0,69,829	0/0:14,0:14:39.06:0,39,463	1/1:2,33:35:99:1223,99,0	0/0:16,0:16:48.14:0,48,582	0/0:22,0:22:63.09:0,63,759	0/0:13,0:13:36.09:0,36,417	0/0:12,0:12:36.11:0,36,444	0/0:16,0:16:42.11:0,42,495	0/0:12,0:12:36.11:0,36,434	0/0:27,0:27:78.11:0,78,887	0/0:22,0:21:63.19:0,63,769	0/0:17,0:17:51.08:0,51,596	0/0:22,0:22:60.15:0,60,714	1/1:3,18:22:54.15:723,54,0	1/1:2,25:27:66.18:909,66,0	1/1:1,20:21:48.02:622,48,0	0/0:16,0:16:45.11:0,45,523	0/0:24,0:24:72.19:0,72,853	0/0:14,0:14:42.12:0,42,507	0/0:28,0:28:84.11:0,84,942	0/0:26,0:26:70.03:0,70,804	1/1:1,40:41:99:1522,108,0	0/0:7,0:7:21.07:0,21,259
chr10	49767570	.	TACACACACACACACAC	T	1122.72	PASS	AC=20;AF=0.476;AN=42;BaseQRankSum=3.158;DP=510;FS=13.456;HRun=0;HaplotypeScore=204.7114;InbreedingCoeff=0.5812;MQ=65.05;MQ0=26;MQRankSum=-2.356;QD=6.24;ReadPosRankSum=-0.632;VQSLOD=1.5471;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:22:6.02:0,6,129	1/1:7,0:8:3.01:112,3,0	./.	./.	1/1:18,0:18:6:65,6,0	0/0:22,0:28:21.07:0,21,743	0/0:14,0:11:3.01:0,3,115	./.	0/0:13,0:12:6.02:0,6,170	1/1:15,0:11:3:28,3,0	./.	0/0:14,0:14:9.03:0,9,278	0/0:16,0:15:15.05:0,15,302	./.	1/1:16,0:18:3.01:112,3,0	0/0:24,0:25:27.08:0,27,597	1/1:18,1:17:4.94:278,5,0	0/0:17,0:13:4.57:0,5,52	./.	1/1:24,0:25:9.03:192,9,0	1/1:13,0:14:3.01:111,3,0	0/0:14,0:12:6.74:0,7,58	0/0:14,0:18:9.50:0,10,145	0/0:16,0:16:15.02:0,15,259	1/1:21,5:25:3.01:130,3,0	./.	1/1:20,0:21:3.01:112,3,0	1/1:10,2:10:3.01:130,3,0
chr10	49771064	.	A	AT	310.71	PASS	AB=0.863;AC=8;AF=0.160;AN=50;BaseQRankSum=-2.719;DP=224;FS=1.029;HRun=1;HaplotypeScore=42.6525;InbreedingCoeff=0.2699;MQ=66.81;MQ0=5;MQRankSum=1.247;QD=4.85;ReadPosRankSum=-2.469;VQSLOD=-0.3905;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:36.12:0,36,496	./.	0/0:11,0:4:6.49:0,6,67	0/1:21,0:5:1.25:1,0,4	0/0:13,0:13:21.07:0,21,292	0/1:12,0:12:1.33:1,0,418	0/0:1,0:1:3.01:0,3,42	0/1:8,13:17:99:339,0,154	0/0:4,0:4:12.04:0,12,163	0/0:12,0:12:33.11:0,33,447	0/0:12,0:11:21.03:0,21,267	0/0:5,0:5:12.04:0,12,165	0/0:8,0:8:24.08:0,24,335	./.	1/1:4,0:4:3.11:8,3,0	0/0:11,0:11:30.10:0,30,410	0/0:10,0:10:15.01:0,15,188	0/0:13,0:13:36.12:0,36,506	0/1:4,1:4:30.12:30,0,108	./.	1/1:1,0:1:3.01:38,3,0	0/0:4,0:4:12.03:0,12,147	0/0:6,0:6:18.06:0,18,246	0/0:4,0:4:8.99:0,9,101	0/0:10,0:10:28.33:0,28,375	0/0:11,0:11:33.11:0,33,449	0/0:2,0:2:5.98:0,6,60	0/0:7,0:7:21.03:0,21,273
chr10	49771078	.	TACAC	T	1777.42	PASS	AB=0.917;AC=19;AF=0.413;AN=46;BaseQRankSum=6.300;DP=246;FS=0.695;HRun=0;HaplotypeScore=63.1009;InbreedingCoeff=0.6325;MQ=54.77;MQ0=13;MQRankSum=2.446;QD=15.32;ReadPosRankSum=0.891;VQSLOD=3.1839;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:24.32:0,24,447	./.	0/1:18,0:5:12.41:12,0,33	./.	1/1:4,11:15:20.69:135,21,0	0/0:10,0:10:23.11:0,23,485	0/0:7,0:7:11.63:0,12,284	0/0:8,0:6:11.83:0,12,77	0/0:6,0:6:12.04:0,12,260	1/1:9,0:9:23.74:267,24,0	1/1:12,0:11:15.18:146,15,0	0/0:4,0:4:3.17:0,3,75	0/0:10,0:10:17.95:0,18,347	./.	0/0:5,0:5:8.51:0,9,151	0/0:12,0:12:20.32:0,20,477	1/1:12,0:11:3.01:46,3,0	1/1:15,0:15:36.95:494,37,0	0/1:4,0:5:10.97:41,0,11	./.	./.	0/0:7,0:7:21.07:0,21,502	0/0:9,0:9:20.54:0,21,470	0/0:7,0:7:12.02:0,12,210	1/1:8,0:8:17.98:249,18,0	1/1:12,0:12:31.90:433,32,0	1/1:2,0:2:6:51,6,0	0/1:7,0:7:9.95:80,0,10
chr10	49771096	.	CAA	C	1477.68	PASS	AB=0.898;AC=20;AF=0.385;AN=52;BaseQRankSum=1.239;DP=284;FS=2.274;HRun=3;HaplotypeScore=71.2522;InbreedingCoeff=0.1946;MQ=46.10;MQ0=21;MQRankSum=2.614;QD=9.29;ReadPosRankSum=4.454;VQSLOD=0.7031;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:15:6.01:0,6,207	0/0:3,0:3:3.85:0,4,32	0/0:10,0:3:2.74:0,3,12	./.	0/1:15,1:16:4.29:4,0,5	0/1:13,0:13:29.29:29,0,294	0/0:12,0:10:15.42:0,15,182	0/1:12,0:8:0:1,0,0	0/0:7,0:7:5.44:0,5,116	0/1:11,2:12:4.28:266,0,4	0/1:3,11:13:12.95:65,0,13	0/0:6,0:6:4.82:0,5,53	0/0:8,0:8:4.60:0,5,201	0/0:7,0:6:2.97:0,3,20	0/1:6,0:6:9.42:9,0,86	0/0:14,0:12:21.46:0,21,307	0/1:4,7:10:21.91:46,0,22	1/1:16,0:16:27.75:462,28,0	1/1:4,0:3:5.68:28,6,0	0/1:7,0:7:0.17:0,0,0	./.	0/0:8,0:8:22.88:0,23,345	0/0:13,0:13:24.94:0,25,281	0/1:7,0:7:8.93:9,0,83	1/1:9,1:10:10.43:152,10,0	1/1:1,11:12:31.96:428,32,0	1/1:6,0:6:5.86:34,6,0	0/1:12,0:11:39.41:98,0,39
chr10	49771114	.	CAG	C	118.99	PASS	AB=0.969;AC=19;AF=0.380;AN=50;BaseQRankSum=0.430;DP=315;FS=11.311;HRun=0;HaplotypeScore=83.9110;InbreedingCoeff=0.1697;MQ=44.82;MQ0=17;MQRankSum=2.393;QD=0.69;ReadPosRankSum=-1.338;VQSLOD=0.4567;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:14:2.75:0,3,24	0/0:6,0:6:6.17:0,6,70	./.	./.	0/1:19,0:19:6.73:7,0,12	1/1:15,0:15:8.92:67,9,0	1/1:12,1:11:0.42:1,0,0	0/0:19,0:15:10.16:0,10,64	1/1:6,4:10:2.46:32,2,0	0/1:15,1:15:6.24:30,0,6	1/1:13,1:13:3.35:33,3,0	1/1:10,0:10:0.64:2,1,0	0/0:11,0:10:5.95:0,6,44	0/1:10,0:10:14.36:18,0,14	0/0:9,0:9:5.85:0,6,153	0/0:13,0:13:2.30:0,2,26	0/0:9,0:8:2.98:0,3,22	0/1:13,0:16:7.47:7,0,19	0/0:10,0:8:8.24:0,8,79	0/1:11,0:11:0.17:0,0,0	./.	0/0:8,0:8:6.02:0,6,84	0/1:13,0:13:2.23:2,0,72	0/0:8,0:8:6:0,6,54	1/1:9,0:10:5.57:40,6,0	0/0:12,0:12:5.89:0,6,36	0/0:8,0:8:3.37:0,3,9	0/1:15,0:13:9.63:10,0,54
chr10	49771536	.	GT	G	4058.45	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=13.985;DP=668;FS=9.912;HRun=8;HaplotypeScore=65.4736;InbreedingCoeff=0.9987;MQ=64.32;MQ0=0;MQRankSum=0.765;QD=25.85;ReadPosRankSum=-3.393;VQSLOD=2.6772;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:66.16:0,66,770	0/0:13,0:13:36.11:0,36,435	0/0:11,0:11:27.08:0,27,318	0/0:9,0:9:21.03:0,21,222	0/0:37,0:37:99:0,105,1266	0/0:31,0:31:90.23:0,90,1071	0/0:19,0:19:51.16:0,51,616	1/1:4,32:36:96.11:913,96,0	0/0:19,0:20:51.02:0,51,594	0/0:32,0:32:93.29:0,93,1123	0/0:31,0:31:75.22:0,75,896	0/0:20,0:20:57.17:0,57,688	0/0:22,0:22:60.18:0,60,723	0/0:24,0:24:66.20:0,66,796	0/0:22,0:22:60.17:0,60,713	0/0:19,0:19:57.17:0,57,689	0/0:23,0:23:63.19:0,63,760	0/0:12,0:12:36.07:0,36,415	1/1:3,26:29:78.09:741,78,0	1/1:5,39:44:99:1072,111,0	1/1:0,17:17:51.08:493,51,0	0/0:19,0:19:54.17:0,54,652	0/0:24,0:24:63.19:0,63,751	0/0:29,0:29:84.26:0,84,1015	0/0:27,0:27:78.23:0,78,932	0/0:27,0:27:75.23:0,75,905	1/1:2,29:30:87.13:840,87,0	0/0:18,0:18:42.12:0,42,496
chr10	49772392	.	TATCATC	T	3698.21	PASS	AB=1.000;AC=36;AF=0.720;AN=50;BaseQRankSum=4.110;DP=656;FS=0.714;HRun=0;HaplotypeScore=161.0289;InbreedingCoeff=0.4684;MQ=70.94;MQ0=7;MQRankSum=-3.123;QD=7.32;ReadPosRankSum=-1.010;VQSLOD=2.5501;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:19:5.30:17,5,0	0/1:11,0:11:15.96:72,0,16	./.	./.	1/1:12,9:21:0.96:136,1,0	0/0:23,0:23:45.07:0,45,1029	0/0:19,0:18:15.04:0,15,290	0/1:50,0:50:0:0,0,0	0/0:20,0:24:20.94:0,21,490	1/1:13,9:22:27.08:439,27,0	1/1:10,8:18:15.01:236,15,0	1/1:13,18:31:18.06:354,18,0	1/1:12,17:29:15.05:295,15,0	1/1:13,15:28:18.06:312,18,0	1/1:26,0:26:9.03:121,9,0	1/1:17,0:33:21.06:267,21,0	1/1:24,0:24:9:130,9,0	1/1:8,0:8:3.50:33,4,0	0/0:19,0:16:5.93:0,6,40	0/1:38,0:38:62.33:62,0,78	0/0:24,0:24:5.95:0,6,42	1/1:11,11:22:20.90:271,21,0	1/1:9,10:19:3.46:52,3,0	1/1:13,9:22:2.97:20,3,0	1/1:9,1:17:21.94:305,22,0	1/1:24,14:36:38.95:542,39,0	0/1:29,0:29:14.97:36,0,15	./.
chr10	49772425	.	CATCATCATCATCATCATCATCATT	C	1131.05	PASS	AB=0.803;AC=12;AF=0.214;AN=56;BaseQRankSum=4.566;DP=599;FS=1.896;HRun=0;HaplotypeScore=315.8387;InbreedingCoeff=0.5745;MQ=55.05;MQ0=18;MQRankSum=-1.633;QD=6.85;ReadPosRankSum=1.237;VQSLOD=1.8437;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:32.93:0,33,937	0/1:13,0:13:99:198,0,172	0/0:6,0:2:5.81:0,6,33	0/0:5,0:2:2.96:0,3,19	0/0:23,0:23:44.95:0,45,1291	0/0:31,0:31:75.22:0,75,5523	0/0:16,0:15:33.03:0,33,1564	1/1:31,0:24:3.75:44,4,0	0/0:19,0:19:39.10:0,39,2404	0/0:21,0:21:48.15:0,48,2165	0/0:20,0:20:41.99:0,42,1349	0/0:28,0:28:42.08:0,42,1980	0/0:25,0:25:33.06:0,33,1830	0/0:29,0:29:45.09:0,45,1880	1/1:21,0:21:9.03:158,9,0	0/0:26,0:26:39.09:0,39,1240	0/0:28,0:27:50.89:0,51,1516	0/0:9,0:9:18.93:0,19,906	1/1:12,0:6:2.97:20,3,0	0/1:14,26:40:10.83:467,0,11	1/1:18,0:18:12.43:208,12,0	0/0:24,0:23:36:0,36,1794	0/0:19,0:19:20.73:0,21,547	0/0:24,0:24:30.03:0,30,1264	0/0:22,0:22:54:0,54,2140	0/0:40,0:37:75.06:0,75,2800	1/1:11,19:30:2.64:189,3,0	0/0:1,0:1:3.01:0,3,249
chr10	49772431	.	CATCATCATCATCATCATT	C	1341.58	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=3.003;DP=597;FS=6.650;HRun=0;HaplotypeScore=258.9650;InbreedingCoeff=0.8372;MQ=55.25;MQ0=16;MQRankSum=-0.563;QD=8.33;ReadPosRankSum=-0.572;VQSLOD=1.7763;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:32.71:0,33,462	1/1:12,1:13:13.72:372,14,0	0/0:7,0:4:11.77:0,12,93	0/0:4,0:2:2.96:0,3,19	0/0:23,0:23:44.92:0,45,782	0/0:31,0:31:75.22:0,75,3931	0/0:17,0:16:33:0,33,994	1/1:29,0:22:18.86:161,19,0	0/0:18,0:18:42.06:0,42,1765	0/0:21,0:21:48.13:0,48,1270	0/0:19,0:19:41.96:0,42,838	0/0:28,0:28:45.08:0,45,1204	0/0:25,0:25:38.78:0,39,1131	0/0:30,0:30:51.07:0,51,1198	1/1:8,15:23:9.03:444,9,0	0/0:25,0:25:36.95:0,37,574	0/0:27,0:26:50.63:0,51,879	0/0:10,0:10:20.50:0,21,596	1/1:10,0:6:2.97:20,3,0	1/1:37,0:37:11.92:296,12,0	1/1:19,0:19:14.63:95,15,0	0/0:25,0:24:38.94:0,39,1162	0/0:20,0:20:20.71:0,21,373	0/0:24,0:24:33.48:0,33,747	0/0:23,0:23:56.97:0,57,1265	0/0:41,0:38:50.67:0,51,1706	1/1:30,0:30:2.63:129,3,0	0/0:1,0:1:3.01:0,3,174
chr10	49776186	.	TTGTGTGTG	T	1886.11	PASS	AB=0.888;AC=24;AF=0.571;AN=42;BaseQRankSum=2.672;DP=603;FS=8.378;HRun=0;HaplotypeScore=150.5603;InbreedingCoeff=0.2068;MQ=69.59;MQ0=13;MQRankSum=-1.080;QD=5.56;ReadPosRankSum=1.885;VQSLOD=2.0984;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:23:0.42:110,0,0	0/0:5,0:5:0:0,0,0	./.	./.	1/1:13,0:13:3.01:36,3,0	0/0:12,0:12:3.01:0,3,114	0/0:32,0:31:18.99:0,19,557	./.	0/0:16,0:16:21.06:0,21,608	0/1:18,0:17:4.09:31,0,4	./.	1/1:14,11:25:9.03:222,9,0	1/1:19,0:20:21.74:227,22,0	1/1:31,0:30:10.29:248,10,0	1/1:11,0:24:18.06:335,18,0	0/1:21,0:26:35.96:44,0,36	0/1:13,14:27:5.17:51,0,5	1/1:23,0:21:4.34:183,4,0	./.	./.	0/0:46,0:42:0:0,0,0	0/0:16,5:21:2.37:0,2,7	./.	1/1:27,12:40:11.93:275,12,0	0/1:12,0:12:50.92:90,0,51	0/1:24,4:28:20.21:20,0,79	1/1:19,0:19:6.02:112,6,0	1/1:7,0:7:3.01:36,3,0
chr10	49776211	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGC	T	1191.94	PASS	AB=1.000;AC=6;AF=0.111;AN=54;BaseQRankSum=3.265;DP=570;FS=1.053;HRun=0;HaplotypeScore=302.0798;InbreedingCoeff=0.4489;MQ=50.18;MQ0=21;MQRankSum=-1.587;QD=12.96;ReadPosRankSum=1.220;VQSLOD=2.1399;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:30:45.14:0,45,2541	0/0:4,0:4:3.01:0,3,61	0/0:16,0:4:3.01:0,3,45	0/0:14,0:4:3.01:0,3,37	0/0:8,0:8:6.02:0,6,401	0/0:11,0:11:18.06:0,18,1284	0/0:40,0:39:58.91:0,59,4267	0/1:11,0:11:1.91:107,0,2	0/0:21,0:21:43.09:0,43,3443	0/0:17,0:16:30.10:0,30,1854	0/0:8,0:8:9.03:0,9,782	0/0:32,0:31:36.59:0,37,2153	0/0:22,0:22:54.16:0,54,2859	0/0:33,0:32:69.24:0,69,3541	0/1:28,0:28:99:693,0,456	0/0:23,0:23:42.62:0,43,3290	0/0:28,0:27:29.07:0,29,1264	0/0:25,0:22:48.16:0,48,2846	0/0:14,0:13:1.55:0,2,4	./.	1/1:36,0:31:5.63:49,6,0	0/0:21,0:21:24.08:0,24,1241	0/0:12,0:11:6.02:0,6,212	0/0:40,0:40:55.13:0,55,3394	0/0:20,0:19:45.15:0,45,2896	0/0:21,0:21:49.41:0,49,2678	1/1:6,11:17:9.02:463,9,0	0/0:8,0:7:9.03:0,9,442
chr10	49778048	.	CTTATA	C	6204.69	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=14.178;DP=676;FS=0.000;HRun=0;HaplotypeScore=124.2649;InbreedingCoeff=0.9864;MQ=80.60;MQ0=0;MQRankSum=-7.203;QD=50.44;ReadPosRankSum=1.288;VQSLOD=4.9365;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:90.31:0,90,2689	0/0:18,0:18:51.18:0,51,1557	0/0:14,0:14:30.10:0,30,914	0/0:21,0:21:60.14:0,60,1612	0/0:34,0:34:93.32:0,93,2824	0/0:35,0:35:99:0,105,3163	0/0:26,0:26:72.25:0,72,2195	1/1:4,32:36:96.29:1874,96,0	0/0:20,0:20:60.21:0,60,1821	0/0:29,0:29:84.29:0,84,2604	0/0:19,0:19:57.20:0,57,1765	0/0:27,0:27:78.27:0,78,2408	0/0:24,0:24:66.20:0,66,1833	0/0:25,0:25:69.22:0,69,1979	0/0:29,0:29:81.28:0,81,2508	0/0:29,0:28:87.30:0,87,2622	0/0:22,0:22:66.23:0,66,2002	0/0:20,0:20:54.19:0,54,1642	1/1:4,10:14:30.10:630,30,0	1/1:0,24:24:63.22:1310,63,0	1/1:2,21:22:60.21:1260,60,0	0/0:27,0:27:78.27:0,78,2368	0/0:22,0:22:63.22:0,63,1850	0/0:24,0:24:66.23:0,66,1944	0/0:24,0:24:69.24:0,69,2006	0/0:30,0:30:87.30:0,87,2672	1/1:3,23:26:54.01:1131,54,0	0/0:3,0:3:9.03:0,9,241
chr10	49778301	.	T	TCTA	4227.19	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=12.882;DP=592;FS=2.911;HRun=0;HaplotypeScore=93.2401;InbreedingCoeff=0.9773;MQ=83.35;MQ0=0;MQRankSum=-12.418;QD=61.26;ReadPosRankSum=-0.650;VQSLOD=5.9143;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,129,2369	0/0:12,0:12:36.11:0,36,639	0/0:18,0:18:51.14:0,51,895	0/0:18,0:18:54.18:0,54,951	0/0:26,0:26:78.25:0,78,1421	0/0:25,0:25:75.26:0,75,1397	0/0:22,0:22:66.23:0,66,1225	1/1:2,12:14:40.38:887,40,0	0/0:19,0:19:57.20:0,57,1062	0/0:27,0:27:81.27:0,81,1454	0/0:16,0:16:48.16:0,48,895	0/0:21,0:21:63.18:0,63,1136	0/0:14,0:14:42.13:0,42,736	0/0:20,0:20:60.21:0,60,1113	0/0:28,0:28:84.27:0,84,1506	0/0:27,0:27:81.28:0,81,1504	0/0:34,0:34:99:0,102,1869	0/0:21,0:21:57.16:0,57,1010	1/1:0,16:17:48.15:1064,48,0	1/1:0,17:18:51.17:1135,51,0	1/1:1,3:4:6.49:109,6,0	0/0:20,0:20:60.21:0,60,1119	0/0:15,0:15:45.15:0,45,838	0/0:27,0:27:81.25:0,81,1442	0/0:26,0:26:78.27:0,78,1454	0/0:29,0:29:87.28:0,87,1590	1/1:0,15:15:48.06:1032,48,0	0/0:15,0:15:45.14:0,45,806
chr10	49778908	.	GT	G	4378.01	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=16.486;DP=684;FS=8.058;HRun=1;HaplotypeScore=77.2227;InbreedingCoeff=0.9976;MQ=81.07;MQ0=0;MQRankSum=-3.359;QD=35.31;ReadPosRankSum=-0.673;VQSLOD=4.3326;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,117,1840	0/0:11,0:11:33.10:0,33,503	0/0:24,0:24:63.21:0,63,968	0/0:19,0:19:48.16:0,48,752	0/0:39,0:39:99:0,117,1870	0/0:16,0:16:48.16:0,48,767	0/0:18,0:18:51.16:0,51,792	1/1:1,30:31:90.23:1085,90,0	0/0:20,0:20:60.20:0,60,959	0/0:27,0:27:81.27:0,81,1271	0/0:19,0:19:54.18:0,54,860	0/0:31,0:31:93.32:0,93,1482	0/0:22,0:22:66.19:0,66,1003	0/0:23,0:23:66.21:0,66,1032	0/0:32,0:32:90.31:0,90,1439	0/0:32,0:32:96.33:0,96,1534	0/0:40,0:40:99:0,120,1899	0/0:8,0:8:24.08:0,24,384	1/1:0,17:17:51.13:616,51,0	1/1:1,29:30:87.27:1078,87,0	1/1:0,20:20:54.17:669,54,0	0/0:19,0:19:57.18:0,57,889	0/0:26,0:26:78.27:0,78,1244	0/0:34,0:34:99:0,102,1582	0/0:27,0:26:81.28:0,81,1293	0/0:27,0:27:81.26:0,81,1252	1/1:1,25:26:75.24:929,75,0	0/0:6,0:6:18.04:0,18,263
chr10	49780669	.	C	CT	7543.52	PASS	AB=0.603;AC=39;AF=0.696;AN=56;BaseQRankSum=-4.865;DP=470;FS=18.221;HRun=10;HaplotypeScore=54.3458;InbreedingCoeff=0.7509;MQ=77.20;MQ0=1;MQRankSum=-1.545;QD=20.61;ReadPosRankSum=0.675;VQSLOD=3.7186;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,19:23:26.48:480,26,0	0/0:7,0:7:17.98:0,18,148	0/0:16,0:15:25.16:0,25,169	0/0:13,0:12:12.43:0,12,98	1/1:4,12:17:8.24:265,8,0	0/0:22,0:22:62.91:0,63,517	0/0:18,0:18:50.94:0,51,419	1/1:7,19:27:56.95:580,57,0	0/0:10,0:10:26.97:0,27,222	1/1:2,10:12:30.08:320,30,0	1/1:4,9:14:29.87:290,30,0	1/1:3,10:13:24.06:256,24,0	1/1:4,14:18:8.59:295,9,0	0/1:5,8:14:25.40:150,0,25	0/0:17,0:17:50.94:0,51,419	1/1:2,12:15:29.91:302,30,0	1/1:4,15:20:26.29:459,26,0	1/1:2,12:14:30.08:320,30,0	0/1:7,14:21:1.01:398,0,1	1/1:4,14:18:11.44:326,11,0	1/1:10,19:29:60.06:619,60,0	1/1:1,14:15:36.05:369,36,0	0/1:3,6:9:6.59:142,0,7	1/1:3,21:24:57.14:608,57,0	1/1:2,17:19:20.47:423,20,0	1/1:3,15:19:47.89:472,48,0	1/1:5,14:19:8.63:295,9,0	1/1:0,5:6:17.88:174,18,0
chr10	49781765	.	C	CGT	1695.92	PASS	AB=0.819;AC=41;AF=0.788;AN=52;BaseQRankSum=-0.663;DP=561;FS=6.020;HRun=0;HaplotypeScore=114.9882;InbreedingCoeff=0.3419;MQ=62.47;MQ0=15;MQRankSum=0.511;QD=3.96;ReadPosRankSum=-1.822;VQSLOD=2.0671;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:33:8.77:73,9,0	0/0:3,0:8:5.68:0,6,28	./.	./.	1/1:11,0:11:6.02:83,6,0	0/1:22,0:22:14.32:14,0,67	0/0:24,0:25:7.12:0,7,218	1/1:14,0:14:2.96:19,3,0	0/0:18,0:18:9.02:0,9,97	1/1:18,0:17:22.56:185,23,0	1/1:16,0:16:5.71:61,6,0	1/1:15,6:21:9.03:123,9,0	0/1:11,5:16:25.79:38,0,26	1/1:20,0:19:10.77:88,11,0	0/0:18,0:33:28.41:0,28,139	1/1:25,0:25:6:51,6,0	1/1:22,0:21:15.38:116,15,0	1/1:13,0:11:0.64:17,1,0	1/1:24,0:22:11.94:106,12,0	1/1:14,0:14:18.01:196,18,0	1/1:15,1:22:2.04:6,2,0	1/1:19,0:19:16.03:152,16,0	1/1:12,6:19:2.90:44,3,0	0/1:23,16:41:11.17:244,0,11	1/1:7,0:8:2.90:37,3,0	1/1:17,0:16:8.99:93,9,0	1/1:15,0:23:8.95:74,9,0	1/1:3,0:6:3:26,3,0
chr10	49782704	.	T	TC	4255.87	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-11.795;DP=708;FS=13.133;HRun=1;HaplotypeScore=67.4273;InbreedingCoeff=0.9955;MQ=72.94;MQ0=0;MQRankSum=2.505;QD=31.52;ReadPosRankSum=-3.803;VQSLOD=2.5014;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:54.15:0,54,669	0/0:21,0:21:60.17:0,60,746	0/0:16,0:16:42.01:0,42,437	0/0:11,0:12:14.91:0,15,170	0/0:37,0:37:99:0,111,1373	0/0:34,0:34:99:0,102,1286	0/0:23,0:23:69.19:0,69,851	1/1:3,30:33:90.15:1094,90,0	0/0:21,0:21:60.14:0,60,718	0/0:34,0:34:99:0,99,1275	0/0:16,0:16:48.14:0,48,604	0/0:30,0:30:90.23:0,90,1091	0/0:32,0:32:87.25:0,87,1077	0/0:26,0:26:78.20:0,78,949	0/0:41,0:41:99:0,123,1518	0/0:33,0:33:99:0,99,1249	0/0:25,0:25:72.23:0,72,915	0/0:15,0:15:39.13:0,39,502	1/1:3,19:22:57.14:734,57,0	1/1:1,29:30:84.12:1099,84,0	1/1:0,15:15:27.09:371,27,0	0/0:23,0:23:66.20:0,66,837	0/0:25,0:25:66.37:0,66,879	0/0:22,0:22:66.19:0,66,823	0/0:29,0:29:87.25:0,87,1074	0/0:31,0:31:93.25:0,93,1139	1/1:3,30:33:69.12:958,69,0	0/0:8,0:8:24.08:0,24,308
chr10	49782808	.	C	CA	10499.99	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=-13.441;DP=722;FS=0.000;HRun=9;HaplotypeScore=72.1848;InbreedingCoeff=0.9800;MQ=75.89;MQ0=0;MQRankSum=0.973;QD=25.30;ReadPosRankSum=2.607;VQSLOD=5.4856;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,31:35:67.20:968,67,0	0/0:13,0:13:29.96:0,30,255	0/0:18,0:18:23.85:0,24,218	0/0:15,0:15:16.79:0,17,135	1/1:4,19:23:31.57:572,32,0	0/0:28,0:28:66.43:0,66,571	0/0:29,0:29:68.94:0,69,595	0/0:25,0:25:56.96:0,57,495	0/0:25,0:26:58.98:0,59,495	1/1:7,28:35:58.19:860,58,0	1/1:4,18:22:51.10:549,51,0	1/1:6,28:34:55.18:829,55,0	1/1:4,17:21:16.06:405,16,0	1/1:4,26:30:71.96:796,72,0	0/0:42,0:42:99:0,108,930	1/1:10,30:40:64.19:936,64,0	1/1:0,23:23:69.19:763,69,0	1/1:3,16:19:45.12:498,45,0	0/0:19,0:19:41.99:0,42,365	0/0:26,0:26:71.98:0,72,625	0/0:32,0:32:80.96:0,81,703	1/1:5,16:21:16.02:392,16,0	1/1:1,20:21:57.15:630,57,0	1/1:5,21:26:66.18:730,66,0	1/1:7,22:29:37.11:638,37,0	1/1:6,26:33:63.22:868,63,0	0/0:33,0:33:83.97:0,84,729	1/1:0,3:3:6.02:66,6,0
chr10	49786825	.	GGGA	G	2541.87	PASS	AB=1.000;AC=39;AF=0.696;AN=56;BaseQRankSum=7.031;DP=394;FS=38.307;HRun=0;HaplotypeScore=79.1919;InbreedingCoeff=0.7346;MQ=84.90;MQ0=0;MQRankSum=-4.376;QD=10.55;ReadPosRankSum=-8.203;VQSLOD=-0.4408;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:13:7.23:76,7,0	0/0:13,0:13:39.08:0,39,781	0/0:17,0:17:39.59:0,40,763	0/0:23,0:23:62.85:0,63,1057	1/1:8,0:8:7.68:64,8,0	0/0:20,0:20:60.20:0,60,1211	0/0:28,0:28:78.70:0,79,1521	0/1:13,0:13:36.42:80,0,36	0/0:23,0:23:69.22:0,69,1456	1/1:4,0:4:11.95:95,12,0	1/1:9,1:10:5.40:26,5,0	1/1:14,0:14:27.47:218,27,0	1/1:17,0:17:10.19:174,10,0	1/1:9,2:11:1.04:93,1,0	0/0:24,0:24:72.22:0,72,1438	1/1:9,0:9:23.97:209,24,0	1/1:17,1:18:24.41:198,24,0	1/1:21,2:23:37.32:304,37,0	1/1:9,0:9:20.91:162,21,0	1/1:4,0:4:2.95:25,3,0	1/1:15,0:14:18.53:214,19,0	1/1:7,0:7:9.96:74,10,0	0/0:5,0:5:0.47:0,0,1	1/1:22,0:22:34.06:290,34,0	1/1:10,2:12:11.49:99,11,0	1/1:12,2:14:13.02:129,13,0	1/1:14,0:14:19.71:171,20,0	1/1:4,0:4:5.84:35,6,0
chr10	49786827	.	GA	G	3903.81	PASS	AB=1.000;AC=41;AF=0.732;AN=56;BaseQRankSum=5.887;DP=392;FS=47.029;HRun=1;HaplotypeScore=60.9160;InbreedingCoeff=0.8167;MQ=84.42;MQ0=0;MQRankSum=-4.270;QD=16.07;ReadPosRankSum=-7.738;VQSLOD=-0.1048;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:12,0:12:10.72:134,11,0	0/0:14,0:14:42.07:0,42,538	0/0:16,0:16:47.99:0,48,593	0/0:22,0:22:65.50:0,65,741	1/1:8,0:8:14.46:101,14,0	0/0:22,0:22:66.15:0,66,815	0/0:28,0:28:81.17:0,81,1023	0/1:13,0:14:20.02:196,0,20	0/0:23,0:23:69.22:0,69,943	1/1:1,4:5:14.43:100,14,0	1/1:8,0:8:13.17:100,13,0	1/1:14,1:15:36.80:298,37,0	1/1:17,0:17:38.71:295,39,0	1/1:11,0:11:10.15:102,10,0	0/0:24,0:24:72.14:0,72,926	1/1:9,0:9:23.94:198,24,0	1/1:17,0:17:30.28:230,30,0	1/1:23,0:23:43.24:351,43,0	1/1:9,0:9:23.90:188,24,0	1/1:4,0:4:3.85:28,4,0	1/1:13,1:13:35.77:295,36,0	1/1:7,0:7:17.68:125,18,0	1/1:4,1:5:5.67:50,6,0	1/1:22,0:22:55.18:459,55,0	1/1:12,0:12:21.55:162,22,0	1/1:15,0:15:29.87:250,30,0	1/1:12,1:13:26.70:221,27,0	1/1:3,0:3:3.85:22,4,0
chr10	49789088	.	A	AAG	2381.99	PASS	AB=0.880;AC=35;AF=0.673;AN=52;BaseQRankSum=-3.519;DP=662;FS=1.486;HRun=0;HaplotypeScore=109.3802;InbreedingCoeff=-0.1433;MQ=59.62;MQ0=20;MQRankSum=-1.299;QD=4.61;ReadPosRankSum=-0.967;VQSLOD=2.8425;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:17,8:27:12.41:217,12,0	0/0:4,0:8:5.68:0,6,28	./.	./.	1/1:18,7:25:9.03:126,9,0	0/0:26,0:30:22.93:0,23,186	0/1:21,0:22:9.07:9,0,244	1/1:29,0:27:3.31:15,3,0	0/1:20,2:22:29.60:30,0,112	1/1:10,4:14:11.48:111,11,0	1/1:12,0:12:3.01:41,3,0	0/1:20,2:23:23.27:80,0,23	0/1:25,1:27:34.72:195,0,35	0/1:18,1:19:32.79:95,0,33	0/1:18,0:30:1.77:2,0,84	0/1:25,3:31:98.50:236,0,99	0/1:13,7:22:89.94:151,0,90	1/1:9,5:14:15.05:223,15,0	1/1:11,0:11:9.49:107,9,0	1/1:20,1:19:3.38:46,3,0	1/1:19,0:17:8.94:79,9,0	0/1:16,10:29:37.21:260,0,37	1/1:10,4:14:3.01:45,3,0	0/1:14,7:21:46.25:137,0,46	0/1:9,7:17:34.65:77,0,35	0/1:23,0:23:43.09:74,0,43	1/1:32,0:31:25.29:178,25,0	0/1:10,0:9:0:0,0,0
chr10	49789353	.	C	CA	1174.80	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-8.234;DP=676;FS=2.361;HRun=2;HaplotypeScore=64.1055;InbreedingCoeff=0.9990;MQ=83.01;MQ0=0;MQRankSum=-2.833;QD=39.16;ReadPosRankSum=1.082;VQSLOD=4.2718;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:66.21:0,66,818	1/1:0,10:10:30.10:432,30,0	0/0:25,0:26:69.61:0,70,813	0/0:14,0:14:27.94:0,28,381	0/0:39,0:39:99:0,111,1363	0/0:26,0:26:75.24:0,75,930	0/0:20,0:20:60.16:0,60,718	0/0:28,0:28:81.25:0,81,994	0/0:10,0:10:30.08:0,30,359	0/0:31,0:31:90.28:0,90,1116	0/0:31,0:31:93.28:0,93,1140	0/0:30,0:30:81.25:0,81,1003	0/0:32,0:32:93.29:0,93,1153	0/0:20,0:20:60.19:0,60,744	1/1:0,20:20:60.20:864,60,0	0/0:20,0:20:57.17:0,57,695	0/0:25,0:25:69.16:0,69,840	0/0:25,0:25:72.23:0,72,892	0/0:19,0:19:54.15:0,54,646	0/0:30,0:30:90.26:0,90,1091	0/0:16,0:16:48.15:0,48,595	0/0:20,0:20:54.17:0,54,669	0/0:22,0:22:66.19:0,66,805	0/0:21,0:21:63.20:0,63,781	0/0:27,0:27:78.23:0,78,956	0/0:24,0:24:66.20:0,66,806	0/0:48,0:48:99:0,129,1585	0/0:20,0:20:60.19:0,60,744
chr10	49790896	.	A	AGG	17616.56	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=8.904;DP=666;FS=2.091;HRun=7;HaplotypeScore=119.9758;InbreedingCoeff=0.9995;MQ=84.52;MQ0=0;MQRankSum=-6.222;QD=34.88;ReadPosRankSum=3.362;VQSLOD=4.0024;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,30:37:74.74:1189,75,0	0/0:9,0:9:24.07:0,24,280	0/0:31,0:30:78.16:0,78,866	0/0:31,0:31:75.16:0,75,847	1/1:4,15:20:42.14:686,42,0	0/0:19,0:19:48.11:0,48,538	0/0:20,0:20:57.09:0,57,627	1/1:6,0:24:60.08:691,60,0	0/0:19,0:19:48.11:0,48,548	1/1:10,19:29:57.19:929,57,0	1/1:2,18:21:45.15:716,45,0	1/1:2,16:19:45.15:718,45,0	1/1:2,30:32:90.31:1459,90,0	1/1:4,25:30:69.24:1130,69,0	0/0:32,0:32:81.24:0,81,944	1/1:5,25:30:69.19:1102,69,0	1/1:1,20:23:65.20:1002,65,0	1/1:1,19:20:42.14:689,42,0	1/1:1,0:16:39.01:413,39,0	1/1:0,0:22:51.12:608,51,0	1/1:0,0:15:42.13:509,42,0	1/1:5,25:31:65.71:1017,66,0	1/1:4,16:22:51.17:806,51,0	1/1:3,17:20:42.14:689,42,0	1/1:1,20:22:57.19:935,57,0	1/1:6,15:22:47.81:722,48,0	1/1:2,0:38:90.28:1112,90,0	1/1:0,12:12:30.10:492,30,0
chr10	49790955	.	TAGACTTA	T	1435.81	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=1.549;DP=655;FS=1.871;HRun=0;HaplotypeScore=190.1683;InbreedingCoeff=0.9836;MQ=91.19;MQ0=0;MQRankSum=-7.421;QD=43.51;ReadPosRankSum=2.302;VQSLOD=3.7931;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:93.30:0,93,3572	1/1:3,6:9:15.05:376,15,0	0/0:35,0:35:93.28:0,93,3127	0/0:19,0:19:57.09:0,57,1534	0/0:30,0:30:90.31:0,90,3522	0/0:17,0:17:48.16:0,48,1939	0/0:21,0:21:60.19:0,60,2325	0/0:33,0:33:96.31:0,96,3738	0/0:16,0:16:42.13:0,42,1595	0/0:19,0:19:57.19:0,57,2098	0/0:21,0:21:63.22:0,63,2408	0/0:21,0:21:57.20:0,57,2282	0/0:29,0:29:81.28:0,81,3170	0/0:33,0:33:87.30:0,87,3323	1/1:1,23:24:44.99:1178,45,0	0/0:26,0:26:75.22:0,75,2720	0/0:27,0:27:81.28:0,81,3138	0/0:24,0:24:66.18:0,66,2554	0/0:15,0:15:45.14:0,45,1700	0/0:17,0:17:51.18:0,51,2060	0/0:26,0:26:72.25:0,72,2814	0/0:34,0:34:96.30:0,96,3636	0/0:19,0:19:51.16:0,51,1896	0/0:25,0:25:72.25:0,72,2711	0/0:24,0:24:66.23:0,66,2622	0/0:18,0:18:54.19:0,54,2086	0/0:30,0:30:84.29:0,84,3310	0/0:7,0:7:15.05:0,15,603
chr10	49792122	.	TC	T	7821.79	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=15.443;DP=735;FS=15.747;HRun=3;HaplotypeScore=68.9104;InbreedingCoeff=0.9987;MQ=82.46;MQ0=0;MQRankSum=-2.078;QD=34.92;ReadPosRankSum=3.130;VQSLOD=3.7799;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:90.30:0,90,1295	0/0:14,0:14:42.14:0,42,605	0/0:19,0:19:49.70:0,50,674	0/0:21,0:21:63.18:0,63,851	1/1:0,24:24:69.22:855,69,0	0/0:33,0:33:96.31:0,96,1363	0/0:25,0:25:75.25:0,75,1080	0/0:32,0:32:90.29:0,90,1279	0/0:25,0:25:75.24:0,75,1062	1/1:0,35:35:99:1252,102,0	1/1:1,20:21:51.16:632,51,0	0/0:27,0:27:81.27:0,81,1163	0/0:31,0:31:90.29:0,90,1276	1/1:0,23:23:69.22:856,69,0	0/0:32,0:32:96.32:0,96,1381	0/0:22,0:22:66.22:0,66,950	1/1:0,33:33:96.30:1190,96,0	1/1:0,19:19:51.16:632,51,0	0/0:18,0:18:54.17:0,54,749	0/0:26,0:26:78.26:0,78,1123	0/0:33,0:33:93.31:0,93,1339	0/0:30,0:30:90.30:0,90,1295	0/0:23,0:23:66.22:0,66,949	0/0:34,0:34:99:0,102,1448	1/1:0,28:28:72.23:893,72,0	1/1:0,35:35:99:1289,105,0	0/0:35,0:35:99:0,105,1487	1/1:0,6:6:18.06:223,18,0
chr10	49793510	.	CTT	C	2224.13	PASS	AB=0.670;AC=26;AF=0.464;AN=56;BaseQRankSum=-0.030;DP=477;FS=2.035;HRun=16;HaplotypeScore=72.0186;InbreedingCoeff=0.6057;MQ=69.36;MQ0=2;MQRankSum=-0.210;QD=8.49;ReadPosRankSum=5.919;VQSLOD=1.0087;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,16:24:28.35:298,28,0	0/1:1,1:7:10.24:10,0,27	0/0:16,1:13:17.93:0,18,173	0/1:18,0:14:1.30:1,0,35	0/0:7,0:22:54.01:0,54,537	0/0:17,0:17:45.10:0,45,544	0/1:10,2:17:33.45:33,0,152	1/1:14,16:32:36.75:393,37,0	0/0:12,1:14:4.28:0,4,261	0/0:16,0:17:26.43:0,26,292	0/0:10,0:19:29.99:0,30,300	1/1:8,9:19:29.34:224,29,0	1/1:5,9:14:1.35:118,1,0	0/0:14,0:16:44.39:0,44,466	0/1:6,1:19:5.11:5,0,115	1/1:1,14:15:29.88:251,30,0	0/0:8,0:22:30.25:0,30,267	0/0:5,0:19:31.73:0,32,269	1/1:7,4:16:20.04:177,20,0	1/1:3,9:13:20.81:175,21,0	1/1:3,5:8:11.44:99,11,0	0/1:5,5:12:2.76:103,0,3	0/1:2,6:10:0.35:71,0,0	1/1:4,8:13:20.57:162,21,0	0/0:13,0:16:39.07:0,39,414	0/0:5,0:16:39.07:0,39,431	1/1:10,13:23:18.56:303,19,0	0/0:5,1:19:4.93:0,5,256
chr10	49794746	.	AGGT	A	5721.76	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=7.436;DP=760;FS=1.622;HRun=0;HaplotypeScore=120.9198;InbreedingCoeff=0.9999;MQ=85.65;MQ0=0;MQRankSum=-3.177;QD=41.46;ReadPosRankSum=-0.030;VQSLOD=6.1085;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,147,3218	0/0:11,0:11:33.11:0,33,734	0/0:30,0:30:71.41:0,71,1507	0/0:21,0:21:63.15:0,63,1302	0/0:31,0:31:78.27:0,78,1716	0/0:23,0:23:66.23:0,66,1474	0/0:32,0:32:93.32:0,93,2057	1/1:3,34:37:99:1640,102,0	0/0:32,0:32:93.32:0,93,2072	0/0:30,0:30:87.28:0,87,1812	0/0:28,0:28:84.29:0,84,1875	0/0:42,0:42:99:0,120,2604	0/0:39,0:39:99:0,117,2534	0/0:25,0:25:72.25:0,72,1605	0/0:24,0:24:72.25:0,72,1591	0/0:29,0:29:75.26:0,75,1676	0/0:22,0:22:66.23:0,66,1469	0/0:18,0:18:54.18:0,54,1143	1/1:1,17:18:51.16:800,51,0	1/1:1,32:33:90.31:1470,90,0	1/1:1,19:20:36.09:587,36,0	0/0:24,0:24:69.24:0,69,1541	0/0:17,0:17:45.15:0,45,988	0/0:18,0:18:51.14:0,51,1049	0/0:20,0:20:57.20:0,57,1271	0/0:41,0:41:99:0,108,2366	1/1:1,29:30:75.26:1224,75,0	0/0:12,0:12:36.12:0,36,756
chr10	49795543	.	G	GGTGTGT	453.17	PASS	AB=0.935;AC=18;AF=0.346;AN=52;BaseQRankSum=0.217;DP=623;FS=2.320;HRun=0;HaplotypeScore=142.3826;InbreedingCoeff=0.4094;MQ=56.65;MQ0=25;MQRankSum=-1.874;QD=1.88;ReadPosRankSum=-2.841;VQSLOD=2.0737;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:33:1.02:35,1,0	0/0:8,0:12:6.79:0,7,86	./.	./.	0/0:26,0:25:18.06:0,18,339	0/1:12,0:15:12.98:13,0,113	0/0:23,0:27:11.24:0,11,149	1/1:35,0:32:2.70:21,3,0	0/0:16,0:19:18.06:0,18,265	0/0:31,0:33:16.30:0,16,221	0/0:17,0:19:13.25:0,13,277	1/1:13,5:25:11.40:218,11,0	1/1:13,0:15:9.03:137,9,0	0/0:17,0:17:15.02:0,15,223	0/1:12,0:15:14.12:14,0,36	1/1:2,0:7:2.11:36,2,0	0/0:25,0:28:51.17:0,51,893	0/0:19,0:18:20.96:0,21,387	0/0:25,0:25:6.49:0,6,80	0/0:17,0:15:5.12:0,5,23	0/0:27,0:26:2.53:0,3,45	0/1:11,3:17:0:1,0,0	1/1:21,4:25:3.01:86,3,0	1/1:23,1:32:2.50:38,2,0	0/0:24,0:26:18.67:0,19,287	0/0:14,0:15:3.29:0,3,46	0/1:20,0:20:4.08:4,0,196	0/0:16,0:14:3.01:0,3,60
chr10	49795911	.	TTGTG	T	7236.89	PASS	AB=0.823;AC=23;AF=0.426;AN=54;BaseQRankSum=4.813;DP=909;FS=6.096;HRun=0;HaplotypeScore=186.2804;InbreedingCoeff=0.6846;MQ=57.50;MQ0=21;MQRankSum=-0.862;QD=16.79;ReadPosRankSum=2.126;VQSLOD=4.2672;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:22,18:40:38.43:918,38,0	0/0:7,0:15:24.91:0,25,118	./.	0/0:31,0:16:9.03:0,9,138	0/0:37,0:37:65.96:0,66,1500	0/0:28,1:30:26.17:0,26,1560	0/0:26,0:29:59.94:0,60,1347	0/0:28,0:16:3.37:0,3,42	0/0:24,0:41:87.25:0,87,1427	0/0:43,0:44:83.39:0,83,1685	0/1:18,1:19:53.45:53,0,597	1/1:20,20:40:66.22:1062,66,0	1/1:22,14:38:66.13:980,66,0	0/0:37,0:40:83.49:0,83,1797	0/1:18,4:49:99:125,0,192	1/1:12,18:35:43.46:1014,43,0	0/1:37,1:39:27.89:28,0,1210	0/0:22,0:19:39.02:0,39,830	1/1:15,0:14:5.91:56,6,0	1/1:13,0:38:13.38:138,13,0	0/0:32,0:28:1.11:0,1,4	1/1:15,18:36:72.15:1085,72,0	1/1:13,7:21:19.53:426,20,0	1/1:13,23:36:8.38:1129,8,0	0/0:26,0:28:44.36:0,44,784	0/0:52,0:52:99:0,102,2048	1/1:6,0:17:24.03:223,24,0	0/0:16,0:15:17.79:0,18,285
chr10	49795995	.	A	ATG	20166.67	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=-8.727;DP=921;FS=19.422;HRun=0;HaplotypeScore=146.9920;InbreedingCoeff=0.9565;MQ=51.31;MQ0=25;MQRankSum=2.535;QD=30.74;ReadPosRankSum=5.548;VQSLOD=4.9679;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:22,29:45:74.50:1291,75,0	0/0:24,0:24:58.97:0,59,732	0/0:48,0:36:68.86:0,69,809	0/0:49,0:35:41.23:0,41,599	1/1:1,19:20:42.14:727,42,0	0/0:23,1:24:3.09:0,3,627	0/0:33,0:32:63.19:0,63,821	1/1:30,15:33:63.06:814,63,0	0/0:39,0:39:99:0,99,1267	1/1:5,34:31:75.24:1262,75,0	1/1:3,18:21:42.12:697,42,0	1/1:4,32:33:72.23:1217,72,0	1/1:8,31:37:72.19:1161,72,0	1/1:3,34:32:78.27:1335,78,0	0/0:47,0:47:99:0,117,1540	1/1:10,32:39:84.70:1345,85,0	1/1:11,6:16:19.52:333,20,0	1/1:11,11:21:34.29:631,34,0	1/1:5,19:23:50.75:803,51,0	1/1:6,15:17:36.12:622,36,0	1/1:13,43:46:99:1757,105,0	1/1:2,20:20:48.16:831,48,0	1/1:2,26:25:51.17:882,51,0	1/1:13,25:37:44.22:1153,44,0	1/1:4,17:20:45.15:763,45,0	1/1:4,42:38:99:1695,102,0	1/1:5,14:18:12.54:655,13,0	1/1:1,6:6:12.04:195,12,0
chr10	49796343	.	A	ATG	10453.27	PASS	AB=0.612;AC=45;AF=0.804;AN=56;BaseQRankSum=2.943;DP=932;FS=5.684;HRun=0;HaplotypeScore=129.0125;InbreedingCoeff=0.8496;MQ=47.92;MQ0=30;MQRankSum=0.730;QD=14.11;ReadPosRankSum=0.419;VQSLOD=4.0276;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:31,18:35:68.94:858,69,0	1/1:0,12:9:14.97:259,15,0	0/0:47,0:27:77.50:0,78,837	0/0:50,0:32:48.83:0,49,771	1/1:7,16:14:9.03:156,9,0	0/0:22,0:22:60.17:0,60,776	0/0:24,0:24:69.14:0,69,829	1/1:14,22:19:18.03:212,18,0	0/0:48,0:48:99:0,102,1569	1/1:10,41:36:78.23:1189,78,0	1/1:2,23:16:21.07:363,21,0	1/1:4,38:23:12.48:403,12,0	1/1:4,50:30:35.95:621,36,0	1/1:3,22:14:12.04:207,12,0	1/1:7,39:30:35.79:583,36,0	0/1:19,33:24:6.82:479,0,7	1/1:10,10:17:24.08:406,24,0	1/1:8,3:9:23.81:280,24,0	1/1:8,9:12:21.52:309,22,0	1/1:4,20:17:18.06:311,18,0	1/1:30,21:37:54.08:792,54,0	1/1:7,30:26:30.10:518,30,0	1/1:7,26:23:22.78:412,23,0	1/1:22,13:25:39.10:596,39,0	1/1:2,17:20:24.08:415,24,0	1/1:7,34:24:43.36:673,43,0	1/1:4,20:15:18.06:308,18,0	1/1:0,5:5:6.02:104,6,0
chr10	49796351	.	A	ATG	770.92	PASS	AB=0.990;AC=20;AF=0.357;AN=56;BaseQRankSum=13.274;DP=917;FS=3.191;HRun=0;HaplotypeScore=152.7450;InbreedingCoeff=-0.4614;MQ=48.42;MQ0=30;MQRankSum=-2.613;QD=1.20;ReadPosRankSum=6.507;VQSLOD=1.9557;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:50,2:37:66.92:67,0,279	1/1:11,0:8:7.48:29,7,0	0/0:49,0:27:68.94:0,69,944	0/0:49,0:32:60.09:0,60,903	0/0:17,0:8:0.89:0,1,79	0/0:22,0:22:60.20:0,60,918	0/0:29,0:28:75.21:0,75,1068	0/0:37,0:17:21.48:0,21,380	0/0:48,0:48:99:0,133,1986	0/1:50,0:34:18.63:19,0,284	0/1:25,0:15:32.10:32,0,52	0/1:45,0:23:27.68:28,0,152	0/1:57,0:32:85.47:85,0,200	0/1:27,0:16:18.93:19,0,142	0/1:45,0:29:59.97:70,0,60	0/1:48,0:20:62.46:62,0,110	0/1:18,0:15:49.58:50,0,84	0/1:12,1:11:83.08:83,0,95	0/0:18,0:14:4.45:0,4,156	0/1:25,0:18:31.65:32,0,174	0/1:46,1:32:79.88:80,0,156	0/1:31,0:20:11.10:82,0,11	0/1:30,0:20:24.56:25,0,143	0/1:30,2:22:27.39:27,0,50	0/1:19,0:19:30.92:31,0,31	0/1:42,0:24:57.67:58,0,224	0/1:25,0:16:51.23:51,0,184	0/0:6,0:6:1.23:0,1,54
chr10	49796353	.	A	ATG	731.51	PASS	AB=0.991;AC=20;AF=0.357;AN=56;BaseQRankSum=13.874;DP=911;FS=0.879;HRun=0;HaplotypeScore=150.8052;InbreedingCoeff=-0.4283;MQ=47.63;MQ0=30;MQRankSum=-3.936;QD=1.15;ReadPosRankSum=5.250;VQSLOD=1.8515;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:48,2:35:78.18:78,0,261	1/1:10,0:7:7.59:31,8,0	0/0:49,0:24:59.21:0,59,874	0/0:45,0:30:51.69:0,52,786	0/0:17,0:8:0.25:0,0,78	0/0:22,0:22:63.20:0,63,940	0/0:26,0:25:72.15:0,72,1001	0/0:45,0:22:37.82:0,38,515	0/0:45,0:45:99:0,116,1922	0/1:49,0:33:28.63:29,0,273	0/1:24,0:14:35.80:36,0,49	0/1:44,0:22:17.76:18,0,153	0/1:58,0:33:80.01:80,0,201	0/1:25,0:14:17.64:18,0,164	0/1:44,0:28:61.58:62,0,79	0/1:50,0:22:62.47:62,0,110	0/1:18,0:15:57.14:57,0,83	0/1:13,1:12:68.11:68,0,90	0/0:18,0:14:1.96:0,2,149	0/1:25,0:18:26.31:26,0,176	0/1:43,1:29:71.26:71,0,176	0/1:30,0:19:0.15:70,0,0	0/1:31,0:21:20.61:21,0,164	0/1:30,1:21:28.89:29,0,50	0/1:19,0:19:30.59:31,0,70	0/1:43,0:25:61.14:61,0,325	0/1:27,0:18:40.01:40,0,173	0/0:6,0:6:0.25:0,0,44
chr10	49796446	.	TTG	T	2377.64	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=0.094;DP=859;FS=30.576;HRun=0;HaplotypeScore=250.0063;InbreedingCoeff=0.9774;MQ=51.65;MQ0=9;MQRankSum=-4.490;QD=14.95;ReadPosRankSum=-4.464;VQSLOD=1.8097;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:42:44.63:0,45,330	0/0:7,0:7:9.01:0,9,55	0/0:37,0:29:64.01:0,64,653	0/0:44,0:28:69.91:0,70,697	0/0:26,0:27:27.58:0,28,194	0/0:26,0:26:41.28:0,41,669	0/0:39,0:39:84.42:0,84,873	1/1:41,0:32:92.96:825,93,0	0/0:43,0:43:42.38:0,42,899	0/0:48,0:48:74.67:0,75,813	0/0:25,0:23:19.48:0,19,165	0/0:26,0:26:47.40:0,47,337	0/0:49,0:47:70.84:0,71,527	0/0:32,0:32:42.82:0,43,307	0/0:38,0:37:56.76:0,57,488	0/0:32,0:31:31.09:0,31,352	0/0:24,0:24:55.29:0,55,379	0/0:12,0:12:12.42:0,12,102	1/1:14,2:17:44.88:408,45,0	1/1:25,3:31:45.33:419,45,0	1/1:31,1:29:53.80:420,54,0	0/0:25,0:25:22.78:0,23,184	0/0:29,0:29:40.41:0,40,292	0/0:23,0:23:29.78:0,30,219	0/0:26,0:26:42.28:0,42,333	0/0:31,0:29:72.39:0,72,590	1/1:0,30:37:43.38:481,43,0	0/0:11,0:10:26.11:0,26,161
chr10	49796448	.	GTCTCTCTCTCTC	G	7530.07	PASS	AB=0.847;AC=36;AF=0.643;AN=56;BaseQRankSum=7.785;DP=814;FS=0.526;HRun=0;HaplotypeScore=349.2775;InbreedingCoeff=0.3543;MQ=51.34;MQ0=10;MQRankSum=-6.362;QD=12.01;ReadPosRankSum=0.852;VQSLOD=2.0701;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:38:17.95:226,18,0	0/0:3,0:7:5.93:0,6,103	0/0:33,0:27:3.01:0,3,65	0/0:40,0:25:6:0,6,63	1/1:14,6:24:21.07:556,21,0	0/0:25,0:27:45.03:0,45,1950	0/0:37,0:39:36.11:0,36,1507	1/1:38,0:29:5.91:54,6,0	0/0:37,0:40:75.21:0,75,2864	0/1:38,8:46:15.69:1000,0,16	1/1:15,6:22:9.03:265,9,0	0/1:16,0:25:10.39:344,0,10	1/1:30,0:44:2.18:921,2,0	1/1:16,8:26:14.62:383,15,0	0/1:29,0:37:0.91:1,0,324	0/1:18,5:30:99:681,0,109	1/1:22,1:24:15.05:409,15,0	1/1:6,5:11:20.01:492,20,0	1/1:16,0:16:7.25:202,7,0	0/1:29,0:29:4.99:5,0,48	0/1:31,0:27:0:0,0,0	0/1:14,2:24:7.05:225,0,7	1/1:18,0:26:17.86:243,18,0	1/1:22,0:23:5.17:87,5,0	1/1:17,6:25:12.04:367,12,0	1/1:24,4:27:19.24:409,19,0	0/1:37,0:37:22.72:395,0,23	1/1:8,1:10:9.03:266,9,0
chr10	49796498	.	ATG	A	5978.19	PASS	AB=0.969;AC=39;AF=0.696;AN=56;BaseQRankSum=8.595;DP=791;FS=0.410;HRun=0;HaplotypeScore=274.8399;InbreedingCoeff=0.7083;MQ=43.80;MQ0=9;MQRankSum=-1.507;QD=9.91;ReadPosRankSum=0.953;VQSLOD=4.2303;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:38,5:40:56.69:444,57,0	0/0:13,0:12:23.35:0,23,316	0/0:25,0:11:32.40:0,32,436	0/0:17,0:10:28.48:0,28,364	1/1:7,25:31:3.37:141,3,0	0/0:27,0:27:48.15:0,48,725	0/0:30,0:30:54.17:0,54,840	0/1:33,0:24:53.41:262,0,53	0/0:31,0:31:54.18:0,54,842	1/1:33,8:39:75.82:722,76,0	1/1:22,4:25:26.88:232,27,0	1/1:26,2:19:2:169,2,0	1/1:33,7:32:46.67:398,47,0	1/1:9,17:23:15.46:133,15,0	0/0:45,0:38:72.23:0,72,1075	0/1:35,4:28:3.35:331,0,3	1/1:30,1:31:53.05:432,53,0	1/1:10,2:12:17.95:158,18,0	0/1:14,0:10:27.36:116,0,27	1/1:23,4:25:20.65:188,21,0	1/1:18,0:19:16.17:227,16,0	1/1:7,31:38:14.77:147,15,0	1/1:25,5:30:56.52:464,57,0	1/1:28,0:27:34.99:283,35,0	1/1:18,4:22:32.96:288,33,0	1/1:29,2:26:45:460,45,0	1/1:27,4:31:25.49:202,25,0	1/1:10,1:10:23.54:182,24,0
chr10	49796500	.	G	GTA	5599.84	PASS	AB=1.000;AC=31;AF=0.554;AN=56;BaseQRankSum=3.257;DP=811;FS=12.871;HRun=0;HaplotypeScore=280.0616;InbreedingCoeff=0.4582;MQ=44.33;MQ0=10;MQRankSum=1.694;QD=10.37;ReadPosRankSum=1.384;VQSLOD=3.3303;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:42,0:39:10.90:59,11,0	0/0:14,0:13:23.99:0,24,254	0/0:26,0:11:33.06:0,33,440	0/0:19,0:12:33.09:0,33,434	1/1:32,0:31:5.31:198,5,0	0/0:27,0:27:66.04:0,66,833	0/0:30,0:30:69.14:0,69,921	0/1:36,0:27:99:251,0,107	0/0:31,0:31:82.61:0,83,1029	1/1:42,0:40:78.10:1077,78,0	1/1:26,0:25:32.59:377,33,0	0/1:31,0:21:28.07:28,0,48	0/0:41,0:32:9.88:0,10,135	1/1:27,0:24:8.47:183,8,0	0/0:45,0:38:71.67:0,72,778	0/1:39,0:28:72.93:131,0,73	1/1:30,3:33:51.60:713,52,0	0/1:12,0:12:2.49:206,0,2	0/1:15,0:11:18.54:146,0,19	1/1:27,0:25:20.11:150,20,0	1/1:18,1:20:14.49:119,14,0	0/0:38,0:38:0.19:0,0,28	0/1:30,0:30:2.67:76,0,3	1/1:29,0:27:11.83:112,12,0	1/1:22,0:22:25.75:456,26,0	1/1:31,0:26:50.46:746,50,0	0/1:32,0:32:50.71:211,0,51	1/1:14,0:13:12.22:361,12,0
chr10	49798241	.	T	TCAA	6839.20	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-12.433;DP=611;FS=14.339;HRun=0;HaplotypeScore=84.1286;InbreedingCoeff=0.9794;MQ=71.17;MQ0=0;MQRankSum=0.040;QD=42.22;ReadPosRankSum=1.970;VQSLOD=5.2148;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,32:38:93.23:1789,93,0	0/0:12,0:12:24.08:0,24,338	0/0:18,0:16:13.85:0,14,184	0/0:17,0:17:20.74:0,21,279	0/0:26,0:26:51.16:0,51,702	0/0:23,0:23:63.18:0,63,854	0/0:23,0:23:51.16:0,51,700	0/0:37,0:37:42.10:0,42,538	0/0:16,0:16:36.12:0,36,505	0/0:27,0:27:66.19:0,66,870	0/0:21,0:22:39.01:0,39,503	1/1:6,13:19:36.12:724,36,0	1/1:4,17:22:51.17:1020,51,0	0/0:21,0:21:51.14:0,51,680	0/0:19,0:19:45.11:0,45,596	1/1:2,18:23:54.19:1086,54,0	0/0:23,0:23:69.22:0,69,956	0/0:19,0:19:45.11:0,45,610	0/0:10,0:10:18.05:0,18,239	0/0:21,0:21:48.16:0,48,677	0/0:19,0:19:21.07:0,21,293	1/1:5,5:10:15.05:302,15,0	1/1:2,15:19:35.74:724,36,0	1/1:10,20:31:60.21:1194,60,0	0/0:27,0:27:69.20:0,69,922	0/0:36,0:36:80.53:0,81,1110	0/0:27,0:27:51.15:0,51,701	0/0:5,0:5:9.02:0,9,109
chr10	49799135	.	GC	G	16227.56	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=-3.039;DP=778;FS=6.340;HRun=1;HaplotypeScore=91.2565;InbreedingCoeff=0.9999;MQ=88.44;MQ0=0;MQRankSum=-4.188;QD=36.71;ReadPosRankSum=7.224;VQSLOD=4.3963;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,54:54:99:1797,129,0	0/0:17,0:17:51.14:0,51,766	0/0:36,0:36:96.68:0,97,1410	0/0:27,0:27:65.24:0,65,902	1/1:0,33:33:96.32:1322,96,0	0/0:23,0:23:69.24:0,69,1095	0/0:25,0:25:75.21:0,75,1122	0/0:42,0:42:99:0,120,1704	0/0:20,0:20:60.18:0,60,908	1/1:0,36:36:99:1398,105,0	1/1:0,35:35:99:1341,99,0	1/1:0,22:22:63.21:878,63,0	1/1:0,16:16:42.14:574,42,0	1/1:0,20:20:51.15:697,51,0	0/0:30,0:30:90.27:0,90,1382	1/1:1,34:35:51.52:1291,52,0	1/1:0,22:22:51.17:707,51,0	1/1:0,13:13:36.12:501,36,0	0/0:25,0:25:75.24:0,75,1087	0/0:26,0:26:78.21:0,78,1077	0/0:33,0:33:99:0,99,1382	1/1:0,23:23:66.18:894,66,0	1/1:0,28:28:75.25:1045,75,0	1/1:0,35:35:90.30:1254,90,0	1/1:0,20:20:51.17:706,51,0	1/1:0,36:36:99:1363,105,0	0/0:32,0:32:96.15:0,96,1349	1/1:0,14:14:33.11:460,33,0
chr10	49801032	.	CT	C	8945.96	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=0.055;DP=552;FS=0.836;HRun=10;HaplotypeScore=63.2893;InbreedingCoeff=0.9711;MQ=79.43;MQ0=0;MQRankSum=-1.403;QD=21.35;ReadPosRankSum=2.065;VQSLOD=5.8286;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,21:26:55.06:455,55,0	0/0:11,0:11:7.82:0,8,113	0/0:19,0:17:26.49:0,26,262	0/0:15,0:17:18.79:0,19,125	1/1:2,25:27:74.91:642,75,0	0/0:29,0:29:81.20:0,81,880	0/0:15,0:15:38.92:0,39,403	1/1:10,20:30:56.92:486,57,0	0/0:15,0:16:47.96:0,48,512	1/1:4,19:23:53.97:464,54,0	1/1:3,27:30:71.92:618,72,0	1/1:0,17:18:52.98:442,53,0	1/1:2,12:14:35.99:313,36,0	1/1:1,25:26:59.98:520,60,0	0/0:26,0:26:44.66:0,45,264	1/1:1,20:21:56.99:495,57,0	1/1:0,12:12:32.99:287,33,0	1/1:2,16:18:44.99:391,45,0	1/1:2,17:19:50.99:443,51,0	1/1:1,28:29:77.94:671,78,0	1/1:0,5:5:15:130,15,0	1/1:1,14:15:35.98:313,36,0	1/1:1,22:23:62.99:547,63,0	1/1:1,12:13:32.99:286,33,0	1/1:2,19:21:53.99:469,54,0	1/1:4,10:14:29.99:260,30,0	1/1:3,26:29:74.78:638,75,0	1/1:3,3:6:8.98:78,9,0
chr10	49801569	.	G	GGATAGATA	5548.33	PASS	AB=0.772;AC=37;AF=0.740;AN=50;BaseQRankSum=1.795;DP=643;FS=0.623;HRun=0;HaplotypeScore=164.9545;InbreedingCoeff=0.3881;MQ=58.90;MQ0=10;MQRankSum=-1.066;QD=11.75;ReadPosRankSum=-2.678;VQSLOD=3.1540;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:11,0:21:29.53:124,0,30	0/1:6,0:12:14.03:14,0,49	./.	./.	1/1:22,0:22:21.46:197,21,0	0/0:29,0:29:36.57:0,37,745	./.	1/1:39,0:39:5.99:61,6,0	0/0:24,0:24:42.12:0,42,893	1/1:12,14:26:36.09:1033,36,0	1/1:5,11:17:9.03:245,9,0	1/1:7,12:19:6.02:243,6,0	1/1:12,15:29:9.03:316,9,0	1/1:7,11:19:6.02:233,6,0	0/0:7,0:27:19.23:0,19,226	0/0:26,0:26:33.11:0,33,749	1/1:17,0:17:9.03:134,9,0	1/1:19,0:19:15.09:143,15,0	0/1:15,0:17:18.40:18,0,20	0/1:9,0:22:32.43:288,0,32	1/1:27,0:35:50.95:501,51,0	1/1:12,12:26:5.85:143,6,0	1/1:3,13:18:15.05:372,15,0	1/1:10,0:20:14.80:108,15,0	1/1:5,12:22:21.05:711,21,0	0/1:13,0:27:32.38:284,0,32	1/1:15,0:34:32.93:290,33,0	1/1:6,0:11:11.88:89,12,0
chr10	49801739	.	T	TAAAAGAA	47639.60	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=-6.174;DP=625;FS=0.338;HRun=0;HaplotypeScore=136.3666;InbreedingCoeff=0.9874;MQ=68.93;MQ0=1;MQRankSum=-16.922;QD=102.23;ReadPosRankSum=1.376;VQSLOD=6.1724;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,15:19:54.10:1937,54,0	0/0:7,0:7:21.07:0,21,587	0/0:35,0:34:99:0,102,2551	0/0:29,0:28:77.11:0,77,1851	1/1:7,18:28:75.58:2350,76,0	0/0:23,0:23:69.22:0,69,1838	0/0:16,0:16:48.16:0,48,1263	1/1:13,10:25:71.96:2668,72,0	0/0:18,0:18:54.19:0,54,1436	1/1:6,22:33:96.32:3519,96,0	1/1:7,19:28:75.26:2865,75,0	1/1:6,16:24:66.19:2605,66,0	1/1:2,16:21:51.18:2133,51,0	1/1:3,15:20:51.18:2086,51,0	0/0:31,0:31:93.30:0,93,2458	1/1:6,16:23:63.22:2590,63,0	1/1:1,9:10:24.08:1005,24,0	1/1:0,3:3:9.03:377,9,0	1/1:2,13:16:48.16:1934,48,0	1/1:7,26:37:99:3961,108,0	1/1:3,7:16:24.08:793,24,0	1/1:3,19:23:66.23:2758,66,0	1/1:7,14:24:60.68:2274,61,0	1/1:0,11:14:24.08:935,24,0	1/1:6,26:33:93.28:3658,93,0	1/1:10,16:27:81.28:3160,81,0	1/1:7,21:31:75.69:2904,76,0	1/1:0,9:11:27.09:1129,27,0
chr10	49803010	.	C	CAT	8117.28	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=-1.377;DP=649;FS=13.554;HRun=0;HaplotypeScore=109.3202;InbreedingCoeff=0.9786;MQ=72.20;MQ0=15;MQRankSum=-2.176;QD=17.65;ReadPosRankSum=0.890;VQSLOD=4.1094;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:34,0:33:47.08:457,47,0	0/0:7,0:7:17.83:0,18,137	0/0:29,0:22:46.44:0,46,438	0/0:59,0:23:47.06:0,47,475	1/1:21,0:21:32.65:261,33,0	0/0:10,0:10:23.90:0,24,208	0/0:26,0:25:68.82:0,69,576	1/1:30,0:29:76.31:637,76,0	0/0:23,0:22:53.87:0,54,506	1/1:6,26:31:68.22:656,68,0	1/1:14,0:13:10.59:228,11,0	1/1:27,0:26:71.66:604,72,0	1/1:26,0:26:50.43:394,50,0	1/1:16,0:16:15.32:344,15,0	0/0:35,0:35:98.56:0,99,811	1/1:18,0:18:46.54:358,47,0	1/1:29,0:28:11.82:377,12,0	1/1:7,0:7:15.39:114,15,0	1/1:16,0:15:33.02:322,33,0	1/1:27,0:27:65.22:505,65,0	1/1:20,0:20:40.42:303,40,0	1/1:24,0:24:56.16:421,56,0	1/1:15,0:15:29.45:231,29,0	1/1:25,0:22:23.50:173,24,0	1/1:29,0:29:74.50:598,75,0	1/1:24,0:23:65.60:572,66,0	1/1:15,0:15:35.86:303,36,0	1/1:11,0:11:32.90:260,33,0
chr10	49803053	.	CTCTCTCTCTT	C	1780.94	PASS	AB=0.971;AC=27;AF=0.482;AN=56;BaseQRankSum=2.284;DP=549;FS=1.447;HRun=0;HaplotypeScore=159.6663;InbreedingCoeff=-0.0745;MQ=48.44;MQ0=36;MQRankSum=0.710;QD=4.66;ReadPosRankSum=-5.492;VQSLOD=0.7060;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:31:84.90:85,0,818	0/1:9,0:9:5.28:5,0,94	0/0:4,0:1:2.92:0,3,17	0/0:9,0:3:2.53:0,3,15	0/1:17,0:16:10.41:35,0,10	0/0:19,0:15:18.07:0,18,577	0/0:27,0:26:16.73:0,17,620	0/1:30,0:28:99:148,0,108	0/0:33,0:33:36.50:0,37,1046	0/1:21,0:21:99:105,0,540	1/1:15,0:12:14.40:81,14,0	1/1:20,0:19:12.60:264,13,0	0/1:11,18:28:2.77:230,0,3	0/1:17,0:16:55.60:56,0,353	0/0:24,0:23:24.31:0,24,474	0/1:23,0:23:99:177,0,236	0/0:33,0:30:2.39:0,2,207	0/1:15,0:11:44.67:45,0,98	0/1:12,0:11:53.85:56,0,54	1/1:7,0:7:7.79:50,8,0	0/0:18,0:17:2.93:0,3,6	1/1:11,12:23:6.60:84,7,0	1/1:12,0:11:3.90:64,4,0	1/1:12,27:36:4.39:139,4,0	0/1:14,0:14:76.02:76,0,142	0/1:24,0:22:93.55:94,0,496	0/1:15,0:13:17.32:131,0,17	1/1:7,0:4:2.34:21,2,0
chr10	49803061	.	CTT	C	2629.57	PASS	AB=0.948;AC=33;AF=0.589;AN=56;BaseQRankSum=5.180;DP=553;FS=17.047;HRun=3;HaplotypeScore=106.9829;InbreedingCoeff=0.0220;MQ=50.14;MQ0=32;MQRankSum=2.967;QD=5.98;ReadPosRankSum=0.392;VQSLOD=-0.7647;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:32:99:271,0,146	0/1:9,0:9:38.93:39,0,90	0/0:13,0:6:12.39:0,12,98	0/0:14,0:6:8.04:0,8,76	0/1:12,0:19:2.86:77,0,3	0/1:17,0:13:6.91:7,0,242	0/0:29,0:28:13.39:0,13,505	0/1:16,12:28:85.86:205,0,86	0/0:32,0:32:25.87:0,26,540	0/1:22,0:22:57.89:182,0,58	0/1:6,9:13:6.75:78,0,7	1/1:22,1:22:25.67:332,26,0	1/1:26,0:25:9.18:129,9,0	0/1:17,0:16:50.15:143,0,50	0/0:25,0:24:14.95:0,15,412	1/1:25,0:25:34.74:345,35,0	0/1:33,0:30:37.32:75,0,37	0/1:15,0:12:15.54:100,0,16	0/1:12,0:11:12.20:76,0,12	1/1:5,0:10:16.10:103,16,0	0/1:18,0:17:1.11:10,0,1	1/1:18,1:19:5.33:73,5,0	1/1:3,6:8:1.97:15,2,0	1/1:33,1:31:4.45:42,4,0	1/1:13,0:13:15.33:133,15,0	0/1:22,0:20:60.28:141,0,60	1/1:14,0:12:17.05:187,17,0	1/1:6,0:3:5.89:38,6,0
chr10	49803063	.	T	TTC	5417.15	PASS	AB=0.914;AC=33;AF=0.589;AN=56;BaseQRankSum=3.186;DP=552;FS=10.451;HRun=0;HaplotypeScore=102.8800;InbreedingCoeff=0.3024;MQ=50.61;MQ0=30;MQRankSum=-0.551;QD=13.24;ReadPosRankSum=-1.489;VQSLOD=3.9054;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:32:12.19:632,0,12	0/0:9,0:9:12.01:0,12,148	0/0:14,0:7:12.50:0,13,137	0/0:14,0:6:7.84:0,8,80	0/1:17,1:17:10.16:203,0,10	0/0:16,0:13:30.02:0,30,330	0/0:29,0:28:70.49:0,70,773	0/1:24,0:24:30.78:443,0,31	0/0:32,0:32:54.01:0,54,618	1/1:19,2:21:38.21:462,38,0	0/1:14,0:12:16.03:197,0,16	1/1:23,0:22:5.49:520,5,0	1/1:25,0:24:4.70:45,5,0	0/1:17,0:16:9.68:261,0,10	0/0:28,0:28:54.48:0,54,637	1/1:26,0:26:47.46:729,47,0	0/1:14,19:31:24.06:61,0,24	0/1:15,0:12:18.17:179,0,18	1/1:12,0:11:12.38:136,12,0	1/1:8,3:11:17.58:228,18,0	0/1:9,10:19:18.49:28,0,18	1/1:19,0:19:14.19:143,14,0	1/1:10,0:9:5.79:66,6,0	0/1:34,0:31:2.42:5,0,2	1/1:13,0:13:22.66:300,23,0	1/1:20,0:19:24.55:403,25,0	1/1:13,0:12:22.68:297,23,0	1/1:6,0:3:6.02:81,6,0
chr10	49806887	.	G	GAA	9363.87	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-8.560;DP=685;FS=1.426;HRun=9;HaplotypeScore=100.8337;InbreedingCoeff=0.9636;MQ=75.73;MQ0=7;MQRankSum=-0.703;QD=32.07;ReadPosRankSum=-0.171;VQSLOD=4.7684;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,20:29:61.67:856,62,0	0/0:15,0:15:39.09:0,39,415	0/0:53,0:28:3.16:0,3,318	0/0:46,0:28:13.32:0,13,212	0/0:33,0:34:86.89:0,87,887	0/0:23,0:23:31.20:0,31,549	0/0:11,0:12:24:0,24,303	1/1:5,23:30:75.21:1084,75,0	0/0:14,0:14:36.05:0,36,375	0/0:27,0:27:66.13:0,66,697	0/0:17,0:17:42.05:0,42,438	1/1:6,17:24:47.61:675,48,0	1/1:5,19:26:62.69:914,63,0	0/0:26,0:28:60.03:0,60,748	0/0:22,0:22:57.11:0,57,598	1/1:2,19:22:47.65:701,48,0	0/0:28,0:28:69.13:0,69,722	0/0:19,0:19:48.53:0,49,490	1/1:8,18:27:62.56:810,63,0	1/1:1,21:22:60.13:865,60,0	1/1:4,6:12:11.52:130,12,0	1/1:1,18:21:60.16:876,60,0	1/1:6,23:30:39.02:900,39,0	1/1:2,9:14:35.55:455,36,0	0/0:23,0:25:41.95:0,42,550	0/0:25,0:25:60.08:0,60,618	1/1:4,31:35:72.24:1098,72,0	0/0:4,0:4:12.03:0,12,128
chr10	49807189	.	GA	G	12090.29	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=11.442;DP=684;FS=2.178;HRun=9;HaplotypeScore=71.1354;InbreedingCoeff=0.9974;MQ=75.55;MQ0=0;MQRankSum=-0.884;QD=22.51;ReadPosRankSum=3.842;VQSLOD=5.7150;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,39:42:99:906,99,0	0/0:11,0:11:27.08:0,27,311	0/0:15,0:13:20.91:0,21,202	0/0:14,0:14:18.26:0,18,297	1/1:6,25:31:69.01:631,69,0	0/0:28,0:28:75.22:0,75,865	0/0:26,0:26:72.19:0,72,811	1/1:7,33:40:99:900,99,0	0/0:23,0:23:57.14:0,57,637	1/1:0,28:28:84.03:763,84,0	1/1:1,15:16:45.02:412,45,0	1/1:3,27:30:72.03:659,72,0	1/1:3,23:26:69.03:631,69,0	1/1:3,33:36:87.05:796,87,0	0/0:30,0:30:78.22:0,78,890	1/1:3,21:24:54.02:494,54,0	1/1:0,19:19:51.03:467,51,0	1/1:0,12:12:27.01:247,27,0	1/1:3,17:20:54.01:489,54,0	1/1:3,23:26:66.03:603,66,0	1/1:1,16:17:42.02:384,42,0	1/1:4,19:23:51.02:467,51,0	1/1:1,24:25:56.64:521,57,0	1/1:2,29:31:69.04:632,69,0	1/1:3,19:22:54.02:494,54,0	1/1:5,25:30:75.04:686,75,0	1/1:0,22:22:57.03:522,57,0	1/1:1,16:17:42.02:384,42,0
chr10	49807367	.	T	TAA	6890.97	PASS	AB=0.578;AC=28;AF=0.500;AN=56;BaseQRankSum=1.939;DP=581;FS=7.339;HRun=10;HaplotypeScore=89.8638;InbreedingCoeff=0.7546;MQ=72.72;MQ0=0;MQRankSum=1.173;QD=19.58;ReadPosRankSum=0.673;VQSLOD=3.6765;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:9,0:33:62.89:237,63,0	0/0:2,0:8:13.71:0,14,59	0/0:11,0:11:17.99:0,18,181	0/0:8,0:8:9.02:0,9,91	1/1:3,18:22:59.49:723,59,0	0/0:24,0:25:57.06:0,57,571	0/0:18,0:19:47.80:0,48,462	0/0:35,0:35:87.09:0,87,865	0/0:22,0:22:57.07:0,57,572	1/1:5,17:24:28.65:704,29,0	1/1:3,18:21:54.05:730,54,0	1/1:9,0:29:19.78:136,20,0	0/1:5,0:20:20.95:76,0,21	1/1:3,16:22:46.62:609,47,0	0/0:2,0:23:57.62:0,58,249	1/1:2,0:22:39.93:140,40,0	1/1:1,25:28:71.21:1001,71,0	1/1:4,9:13:21.07:313,21,0	0/0:21,0:21:48.07:0,48,488	0/0:19,0:19:51.11:0,51,519	0/0:17,0:17:42.06:0,42,427	0/1:3,0:13:7.04:64,0,7	0/1:5,0:12:1.55:92,0,2	0/1:5,0:29:5.11:120,0,5	1/1:6,22:30:66.97:892,67,0	1/1:3,23:27:69.08:914,69,0	0/0:21,0:21:54.08:0,54,541	1/1:0,5:6:11.53:143,12,0
chr10	49807953	.	G	GA	11542.48	PASS	AB=0.650;AC=41;AF=0.732;AN=56;BaseQRankSum=-7.288;DP=578;FS=6.499;HRun=8;HaplotypeScore=62.9908;InbreedingCoeff=0.9035;MQ=76.18;MQ0=0;MQRankSum=-3.030;QD=26.11;ReadPosRankSum=2.302;VQSLOD=5.7511;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,26:27:66.20:761,66,0	0/0:8,0:8:24.01:0,24,220	0/0:26,0:22:23.50:0,23,229	0/0:17,0:15:15.24:0,15,166	1/1:6,25:31:38.68:684,39,0	0/0:21,0:21:63:0,63,566	0/0:25,0:25:66.02:0,66,600	1/1:7,20:27:35.67:633,36,0	0/0:16,0:16:48.03:0,48,439	1/1:6,21:27:64.42:721,64,0	1/1:4,15:20:17.67:456,18,0	1/1:4,16:20:45.13:519,45,0	1/1:3,17:20:45.13:519,45,0	1/1:2,12:14:33.10:381,33,0	0/0:23,0:23:63.01:0,63,571	1/1:0,25:25:66.15:747,66,0	1/1:2,15:17:39.12:450,39,0	1/1:1,8:9:24.07:277,24,0	1/1:4,17:21:57.14:632,57,0	1/1:6,17:23:26.63:532,27,0	0/1:6,7:13:25.20:236,0,25	1/1:4,12:17:38.91:415,39,0	1/1:4,26:30:69.20:793,69,0	1/1:4,23:27:66.18:762,66,0	1/1:3,17:20:51.15:588,51,0	1/1:1,15:17:42.04:467,42,0	1/1:3,16:19:39.12:449,39,0	1/1:1,17:18:45.13:518,45,0
chr10	49808302	.	G	GCT	939.12	PASS	AB=1.000;AC=29;AF=0.853;AN=34;BaseQRankSum=-0.544;DP=224;FS=10.480;HRun=0;HaplotypeScore=53.3508;InbreedingCoeff=0.4048;MQ=76.46;MQ0=4;MQRankSum=-1.806;QD=7.11;ReadPosRankSum=0.022;VQSLOD=1.7961;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,0:9:2.94:18,3,0	1/1:4,0:4:8.98:73,9,0	./.	0/0:11,0:8:5.87:0,6,23	./.	1/1:7,0:6:8.99:75,9,0	1/1:4,0:4:6:51,6,0	1/1:19,0:19:24:212,24,0	./.	1/1:6,0:6:5.37:35,5,0	./.	./.	./.	./.	0/0:8,0:8:3:0,3,25	0/1:4,0:4:0:0,0,0	1/1:6,10:15:5.98:64,6,0	1/1:13,0:12:22.07:152,22,0	1/1:14,0:14:14.97:137,15,0	1/1:8,0:8:8.99:75,9,0	./.	./.	1/1:4,0:4:2.96:25,3,0	./.	./.	1/1:9,0:8:11.87:80,12,0	1/1:5,0:5:2.99:24,3,0	1/1:9,0:10:2.96:19,3,0
chr10	49808402	.	TGTAC	T	332.84	PASS	AB=1.000;AC=15;AF=0.536;AN=28;BaseQRankSum=0.633;DP=87;FS=1.515;HRun=0;HaplotypeScore=30.7373;InbreedingCoeff=0.4371;MQ=74.83;MQ0=7;MQRankSum=-0.240;QD=11.89;ReadPosRankSum=-1.462;VQSLOD=2.3775;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:15,0:3:2.99:0,3,37	0/0:25,0:8:3.25:0,3,24	./.	0/0:3,0:3:9.03:0,9,222	0/0:2,0:2:6.02:0,6,132	1/1:0,5:5:15.01:162,15,0	0/0:3,0:3:9.03:0,9,260	./.	./.	./.	./.	./.	0/0:2,0:2:6.02:0,6,82	1/1:1,0:1:3.01:50,3,0	0/1:8,0:8:9:55,0,9	1/1:4,0:3:2.94:18,3,0	1/1:1,0:1:3.01:34,3,0	./.	./.	./.	./.	./.	1/1:4,0:4:3:27,3,0	1/1:3,0:3:5.95:56,6,0	1/1:2,0:2:5.99:48,6,0	./.
chr10	49810080	.	GT	G	2943.18	PASS	AB=0.686;AC=12;AF=0.222;AN=54;BaseQRankSum=-2.571;DP=388;FS=2.938;HRun=1;HaplotypeScore=91.4208;InbreedingCoeff=0.0358;MQ=49.27;MQ0=25;MQRankSum=2.535;QD=18.63;ReadPosRankSum=4.579;VQSLOD=4.2235;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:58.70:0,59,781	0/0:8,0:8:21.05:0,21,266	0/0:4,0:1:3.01:0,3,46	0/0:5,0:1:3.01:0,3,44	0/1:4,8:11:13.23:288,0,13	0/0:13,0:12:27.09:0,27,419	0/0:25,0:22:41.16:0,41,590	0/0:19,0:7:17.94:0,18,233	0/0:17,0:17:44.76:0,45,680	0/1:9,12:19:99:459,0,172	1/1:5,3:5:15.04:192,15,0	0/0:15,0:15:32.67:0,33,394	0/0:9,0:9:18.51:0,19,223	0/1:13,8:18:99:288,0,189	0/0:16,0:15:39.02:0,39,533	0/0:10,0:9:20.98:0,21,242	0/1:9,12:21:99:444,0,258	0/1:9,7:15:99:253,0,155	0/0:6,0:2:5.89:0,6,38	0/0:9,0:9:17.97:0,18,215	0/1:15,0:14:8.03:8,0,88	0/0:4,0:4:9.02:0,9,115	./.	0/0:24,0:24:51.10:0,51,665	1/1:6,13:18:0.72:465,1,0	0/1:4,7:9:11.40:282,0,11	0/0:18,0:17:45.09:0,45,494	0/1:4,10:14:23.91:412,0,24
chr10	49810084	.	GT	G	1452	PASS	AB=0.938;AC=20;AF=0.400;AN=50;BaseQRankSum=4.295;DP=383;FS=0.000;HRun=1;HaplotypeScore=105.7208;InbreedingCoeff=0.6691;MQ=49.05;MQ0=24;MQRankSum=3.161;QD=8.85;ReadPosRankSum=5.020;VQSLOD=1.0711;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:48.08:0,48,457	0/0:5,0:5:15.04:0,15,196	./.	./.	1/1:9,1:9:2.99:61,3,0	0/0:14,0:13:30.10:0,30,463	0/0:29,0:26:50.11:0,50,656	0/1:19,0:7:3.87:4,0,220	0/0:16,0:16:41.76:0,42,654	0/1:18,3:19:21.98:246,0,22	1/1:4,2:3:2.45:35,2,0	0/0:14,0:14:28.90:0,29,304	0/0:9,1:10:14.85:0,15,140	1/1:19,1:17:27.90:248,28,0	0/0:18,0:17:45.04:0,45,621	0/0:14,0:13:28.86:0,29,293	1/1:20,0:20:40.73:314,41,0	1/1:15,0:14:0.28:167,0,0	1/1:6,0:2:2.98:22,3,0	0/0:8,0:8:14.97:0,15,193	0/0:14,0:13:12.96:0,13,120	0/0:3,0:3:5.23:0,5,51	./.	0/0:24,0:24:51.05:0,51,656	1/1:19,3:21:6.25:145,6,0	1/1:10,1:9:13.86:149,14,0	0/0:18,0:17:45.11:0,45,520	1/1:13,1:14:18.04:237,18,0
chr10	49810088	.	GT	G	1214.24	PASS	AB=0.781;AC=8;AF=0.160;AN=50;BaseQRankSum=-0.654;DP=374;FS=2.091;HRun=1;HaplotypeScore=103.6251;InbreedingCoeff=-0.2184;MQ=49.22;MQ0=24;MQRankSum=3.158;QD=9.06;ReadPosRankSum=1.372;VQSLOD=1.3766;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:21.85:0,22,405	0/0:5,0:5:15.04:0,15,196	./.	./.	0/1:9,1:9:20.85:21,0,169	0/0:13,0:12:30.10:0,30,460	0/0:26,0:23:44.17:0,44,634	0/0:19,0:7:21.04:0,21,285	0/0:15,0:15:38.75:0,39,608	0/1:16,5:19:99:167,0,360	0/0:6,0:3:9:0,9,94	0/0:19,0:19:43.81:0,44,490	0/0:10,0:10:1.38:0,1,168	0/1:10,10:17:99:328,0,149	0/0:16,0:15:39.02:0,39,529	0/0:15,0:14:31.69:0,32,373	0/1:12,8:20:99:275,0,242	0/1:9,6:14:99:215,0,140	0/0:5,0:1:2.74:0,3,12	0/0:7,0:7:12.04:0,12,176	0/0:16,0:14:12.95:0,13,130	0/0:3,0:3:5.23:0,5,51	./.	0/0:23,0:23:45.22:0,45,519	0/1:17,5:21:99:120,0,334	0/1:8,4:10:99:153,0,130	0/0:17,0:16:37.66:0,38,474	0/1:12,2:14:64.57:65,0,248
chr10	49811602	.	C	CATATATAT	3011.97	PASS	AB=1.000;AC=17;AF=0.315;AN=54;BaseQRankSum=-5.594;DP=260;FS=11.991;HRun=0;HaplotypeScore=78.1479;InbreedingCoeff=0.5856;MQ=77.52;MQ0=4;MQRankSum=-4.229;QD=27.63;ReadPosRankSum=-3.563;VQSLOD=1.1469;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,0:8:9.03:297,9,0	0/1:3,0:3:15.97:16,0,98	0/1:9,0:6:11.36:21,0,11	0/1:19,0:11:1.74:2,0,40	0/0:14,0:14:30.10:0,30,486	0/0:15,0:16:36.10:0,36,824	0/0:6,0:6:18.06:0,18,478	1/1:12,25:45:93.14:1970,93,0	0/0:6,0:6:18.04:0,18,423	0/0:13,0:13:17.27:0,17,249	0/0:11,0:11:25.32:0,25,377	0/0:4,0:4:12.01:0,12,250	0/0:2,0:2:6.02:0,6,129	0/0:5,0:5:10.28:0,10,157	./.	1/1:4,3:7:12.03:402,12,0	0/0:15,0:15:30.10:0,30,492	0/0:8,0:8:21.07:0,21,358	1/1:8,0:7:11.96:189,12,0	1/1:2,0:2:3.01:95,3,0	1/1:4,0:3:6.02:88,6,0	0/0:2,0:2:3:0,3,26	0/0:4,0:4:9.03:0,9,239	0/0:4,0:4:12.01:0,12,175	0/0:16,0:15:33.11:0,33,541	0/0:5,0:5:4.42:0,4,140	1/1:1,0:4:3.01:106,3,0	0/0:19,0:20:18.72:0,19,685
chr10	49811613	.	ATG	A	3172.99	PASS	AB=0.977;AC=27;AF=0.500;AN=54;BaseQRankSum=0.409;DP=265;FS=1.148;HRun=0;HaplotypeScore=47.9009;InbreedingCoeff=0.4692;MQ=80.74;MQ0=4;MQRankSum=0.994;QD=16.70;ReadPosRankSum=0.869;VQSLOD=3.5030;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:8,0:8:4.24:19,0,4	0/0:4,0:4:5.83:0,6,46	0/1:12,1:10:14.29:14,0,101	0/0:16,0:10:5.94:0,6,91	1/1:0,14:14:30.10:458,30,0	0/0:12,0:12:22.34:0,22,589	0/0:9,0:9:27.05:0,27,422	0/1:30,0:30:0.99:167,0,1	0/0:8,0:8:24.05:0,24,387	1/1:0,11:11:30.05:375,30,0	1/1:1,9:10:27.05:386,27,0	0/0:7,0:7:20.91:0,21,261	0/0:4,0:4:12:0,12,162	1/1:0,7:7:12.04:182,12,0	./.	0/1:6,0:6:11.94:12,0,28	1/1:1,13:14:7.07:389,7,0	1/1:0,9:9:21.07:320,21,0	0/1:9,0:8:3.94:84,0,4	1/1:5,0:5:7.55:54,8,0	0/1:4,0:3:7.98:14,0,8	0/0:4,0:4:12:0,12,133	0/0:4,0:4:12.03:0,12,198	0/0:6,0:6:18.01:0,18,245	1/1:0,17:16:33.11:504,33,0	1/1:0,7:7:19.84:218,20,0	1/1:6,0:6:1.48:41,1,0	0/1:18,2:20:99:123,0,285
chr10	49812866	.	TACACACACACACACATACACACACACAC	T	2722.36	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.517;DP=635;FS=3.821;HRun=0;HaplotypeScore=405.8919;InbreedingCoeff=0.9397;MQ=61.80;MQ0=7;MQRankSum=-5.070;QD=75.62;ReadPosRankSum=4.130;VQSLOD=1.3125;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:27.08:0,27,2749	1/1:5,7:12:18.06:1311,18,0	0/0:25,0:13:18.04:0,18,884	0/0:20,0:11:14.63:0,15,1047	0/0:10,0:10:12.51:0,13,1256	0/0:29,0:29:81.28:0,81,8279	0/0:23,0:23:54.19:0,54,4878	0/0:33,0:32:63.22:0,63,3992	0/0:33,0:33:84.29:0,84,9461	0/0:25,0:24:24.26:0,24,4441	0/0:19,0:19:21.47:0,21,1296	0/0:25,0:26:69.22:0,69,6956	0/0:26,0:26:63.22:0,63,6454	0/0:22,0:22:23.62:0,24,1055	1/1:14,10:24:21.07:1530,21,0	0/0:32,0:32:53.76:0,54,5447	0/0:16,0:16:21.05:0,21,1287	0/0:12,0:12:30.10:0,30,2119	0/0:21,0:20:34.02:0,34,2840	0/0:22,0:22:12.03:0,12,1007	0/0:29,0:29:18.01:0,18,1354	0/0:26,0:26:57.20:0,57,6180	0/0:24,0:24:54.19:0,54,5591	0/0:23,0:23:48.16:0,48,5012	0/0:20,0:20:24.08:0,24,1945	0/0:28,0:28:66.23:0,66,6315	0/0:26,0:26:42.14:0,42,2800	0/0:8,0:8:24.08:0,24,1648
chr10	49812882	.	T	TACACAC	3151.30	PASS	AB=1.000;AC=33;AF=0.589;AN=56;BaseQRankSum=-0.261;DP=682;FS=1.116;HRun=0;HaplotypeScore=161.5889;InbreedingCoeff=0.6872;MQ=55.71;MQ0=13;MQRankSum=-0.754;QD=7.69;ReadPosRankSum=-2.664;VQSLOD=2.0360;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:10,0:32:14.08:204,14,0	0/0:7,0:7:18.53:0,19,252	0/0:28,0:11:0.74:0,1,13	0/1:24,0:11:14.63:15,0,33	1/1:4,4:12:9.03:168,9,0	0/0:29,0:31:26.44:0,26,780	0/0:29,0:30:44.98:0,45,624	1/1:30,0:29:11.49:105,11,0	0/0:29,0:33:72.07:0,72,1185	1/1:13,11:27:39.04:664,39,0	1/1:20,1:21:2.70:97,3,0	0/0:33,0:35:14.45:0,14,1030	0/0:24,0:26:45.56:0,46,771	1/1:12,14:28:2.63:97,3,0	0/0:10,0:10:21.07:0,21,293	1/1:12,0:40:29.69:385,30,0	1/1:9,0:19:3.01:78,3,0	1/1:9,0:18:3.47:79,3,0	1/1:16,0:15:3:27,3,0	1/1:15,0:15:3.01:90,3,0	1/1:28,0:27:14.75:164,15,0	0/0:24,0:24:36.44:0,36,622	0/0:27,0:27:19.02:0,19,644	0/0:20,0:20:29.89:0,30,553	1/1:11,16:27:12.04:392,12,0	1/1:18,13:31:32.82:542,33,0	1/1:17,1:29:2.98:78,3,0	1/1:7,1:10:6.02:164,6,0
chr10	49812890	.	C	CACACAC	3230.05	PASS	AB=1.000;AC=33;AF=0.589;AN=56;BaseQRankSum=-1.814;DP=688;FS=1.116;HRun=0;HaplotypeScore=157.4660;InbreedingCoeff=0.6758;MQ=53.92;MQ0=15;MQRankSum=-1.045;QD=7.71;ReadPosRankSum=-3.318;VQSLOD=2.0074;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:38,0:37:14.07:204,14,0	0/0:7,0:7:18.53:0,19,252	0/0:30,0:10:0.74:0,1,13	0/1:28,0:12:14.63:15,0,33	1/1:17,0:17:9.03:168,9,0	0/0:27,0:27:26.44:0,26,780	0/0:31,0:30:45.08:0,45,624	1/1:30,0:29:11.49:105,11,0	0/0:29,0:29:72.07:0,72,1185	1/1:28,0:26:39.04:664,39,0	1/1:11,7:20:2.81:98,3,0	0/0:34,0:34:14.45:0,14,1030	0/0:25,0:25:42.60:0,43,752	1/1:26,0:26:2.63:97,3,0	0/0:10,0:10:21.07:0,21,293	1/1:42,0:42:29.69:385,30,0	1/1:19,0:19:3.01:78,3,0	1/1:19,0:19:0.32:157,0,0	1/1:15,0:14:3:27,3,0	1/1:16,0:16:3.01:90,3,0	1/1:30,0:29:14.93:165,15,0	0/0:28,0:28:36.31:0,36,622	0/0:27,0:27:19.02:0,19,644	0/0:21,0:21:29.89:0,30,553	1/1:28,0:28:12.04:392,12,0	1/1:31,0:31:32.82:542,33,0	1/1:26,0:26:3.01:79,3,0	1/1:6,0:6:6.02:164,6,0
chr10	49816026	.	AT	A	3869.20	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=4.900;DP=498;FS=8.119;HRun=10;HaplotypeScore=86.0793;InbreedingCoeff=0.9410;MQ=68.45;MQ0=0;MQRankSum=-0.198;QD=21.03;ReadPosRankSum=0.109;VQSLOD=4.1188;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,14:17:38.33:337,38,0	1/1:2,3:5:6:52,6,0	0/0:8,0:8:11.98:0,12,110	0/0:9,1:10:9.47:0,9,84	0/0:28,2:31:34.95:0,35,817	0/0:17,0:19:47.80:0,48,493	0/0:12,0:12:27.07:0,27,299	1/1:1,29:31:88.98:753,89,0	0/0:11,0:11:30.08:0,30,331	0/0:14,0:14:42.02:0,42,441	0/0:18,1:21:24.94:0,25,486	0/0:21,0:21:57.15:0,57,624	0/0:18,0:18:51.09:0,51,542	0/0:12,0:12:30.06:0,30,316	1/1:3,22:25:62.97:547,63,0	1/1:2,18:20:50.99:442,51,0	0/0:20,0:20:51.14:0,51,564	0/0:21,0:21:53.84:0,54,530	1/1:3,13:16:8.80:305,9,0	1/1:3,27:30:74.96:651,75,0	1/1:0,5:5:15:130,15,0	0/0:17,0:17:45.12:0,45,498	0/0:21,0:21:54.15:0,54,597	0/0:9,0:9:24.06:0,24,266	0/0:21,1:22:37.31:0,37,638	0/0:23,0:23:44.99:0,45,479	1/1:5,30:35:55.80:652,56,0	0/0:4,0:4:6.02:0,6,66
chr10	49817406	.	A	AGTGT	3167.86	PASS	AB=0.776;AC=20;AF=0.385;AN=52;BaseQRankSum=-0.923;DP=701;FS=0.482;HRun=0;HaplotypeScore=148.4861;InbreedingCoeff=0.0326;MQ=57.44;MQ0=8;MQRankSum=0.231;QD=7.63;ReadPosRankSum=-0.723;VQSLOD=2.1802;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:31:15.02:0,15,139	0/0:5,0:12:15.02:0,15,139	./.	./.	0/1:19,15:36:35.15:142,0,35	0/0:29,0:32:32.72:0,33,364	0/0:21,0:24:26.60:0,27,464	0/1:16,0:15:14.40:14,0,17	0/1:28,0:30:0.17:0,0,451	0/1:11,12:26:32.71:490,0,33	1/1:15,13:33:11.78:236,12,0	0/0:22,0:27:25.90:0,26,528	0/0:26,0:26:42.59:0,43,599	1/1:27,5:32:13.53:544,14,0	0/0:13,0:31:3.48:0,3,194	0/0:8,0:21:24.03:0,24,223	0/1:17,7:27:72.59:250,0,73	0/1:6,4:12:17.88:65,0,18	0/1:10,0:14:33.13:40,0,33	0/1:13,0:24:38.35:38,0,117	0/1:20,0:39:41.56:42,0,45	0/0:20,0:18:23.63:0,24,436	0/1:25,0:28:58.19:58,0,363	0/0:30,0:31:53.87:0,54,720	0/1:12,12:27:10.18:207,0,10	1/1:19,14:37:59.07:888,59,0	0/1:18,0:22:60.06:87,0,60	1/1:0,5:9:14.52:236,15,0
chr10	49817594	.	ATG	A	1950.14	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.621;DP=1153;FS=4.409;HRun=0;HaplotypeScore=164.0446;InbreedingCoeff=0.9883;MQ=55.30;MQ0=18;MQRankSum=5.027;QD=18.57;ReadPosRankSum=-0.047;VQSLOD=3.8259;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:38,28:62:43.24:1264,43,0	0/0:16,0:15:36.12:0,36,617	0/0:61,0:23:15.39:0,15,564	0/0:68,0:25:46.29:0,46,584	0/0:37,0:37:99:0,102,1675	0/0:22,0:22:45.14:0,45,738	0/0:40,0:40:99:0,105,1672	0/0:64,0:60:99:0,146,2147	0/0:42,0:42:99:0,105,1689	0/0:56,0:54:99:0,139,2062	0/0:35,0:35:70.49:0,70,1426	0/0:39,0:39:99:0,101,1616	0/0:49,0:48:99:0,132,2145	0/0:56,0:55:99:0,135,2163	0/0:40,0:39:92.51:0,93,1503	1/1:16,23:39:69.02:808,69,0	0/0:39,0:39:99:0,102,1660	0/0:22,0:22:57.93:0,58,878	0/0:28,0:24:45.79:0,46,848	0/0:23,0:23:63.22:0,63,1081	0/0:98,0:96:99:0,255,4165	0/0:29,0:29:81.16:0,81,1233	0/0:28,0:28:78.24:0,78,1273	0/0:39,1:40:99:0,99,1590	0/0:28,0:28:66.22:0,66,1109	0/0:46,0:44:99:0,126,2027	0/0:35,0:35:99:0,99,1592	0/0:7,0:7:18.06:0,18,297
chr10	49817628	.	ATG	A	1637.95	PASS	AB=0.978;AC=5;AF=0.089;AN=56;BaseQRankSum=10.172;DP=1071;FS=20.951;HRun=0;HaplotypeScore=148.0261;InbreedingCoeff=0.7541;MQ=54.96;MQ0=27;MQRankSum=4.828;QD=11.22;ReadPosRankSum=-0.938;VQSLOD=1.8556;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:25,43:65:96.26:1197,96,0	0/0:16,0:15:42.14:0,42,678	0/0:32,0:13:9.92:0,10,151	0/1:43,1:11:6.14:6,0,171	0/0:37,3:38:6.19:0,6,1119	0/0:24,0:24:51.05:0,51,839	0/0:45,0:45:87.29:0,87,1427	0/0:67,0:56:99:0,102,1624	0/0:37,0:37:63.46:0,63,1256	0/0:35,0:33:72.70:0,73,1138	0/0:31,0:31:81.28:0,81,1321	0/0:35,0:35:52.99:0,53,1334	0/0:54,0:53:99:0,135,2149	0/0:44,0:44:96.33:0,96,1562	0/0:35,1:34:43.71:0,44,1191	1/1:12,22:34:45.04:561,45,0	0/0:44,0:44:68.34:0,68,1572	0/0:24,0:24:53.46:0,53,818	0/0:28,0:25:60.19:0,60,923	0/0:23,0:23:60.17:0,60,930	0/0:101,0:97:99:0,214,3677	0/0:25,0:24:51.16:0,51,810	0/0:26,1:26:40.70:0,41,1156	0/0:50,0:50:99:0,123,1945	0/0:22,0:22:54.17:0,54,862	0/0:45,1:41:70.51:0,71,1573	0/0:31,0:31:69.24:0,69,1127	0/0:7,0:7:12.04:0,12,198
chr10	49818069	.	T	TC	1642.33	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-4.301;DP=679;FS=1.900;HRun=6;HaplotypeScore=76.6707;InbreedingCoeff=0.9914;MQ=80.90;MQ0=0;MQRankSum=-2.679;QD=25.66;ReadPosRankSum=1.076;VQSLOD=3.8298;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,25:31:69.21:858,69,0	0/0:11,0:11:30.06:0,30,306	0/0:17,0:17:36.03:0,36,353	0/0:18,0:18:40.58:0,41,376	0/0:21,0:21:63.14:0,63,642	0/0:13,0:13:36.08:0,36,365	0/0:27,0:27:75.17:0,75,765	0/0:30,0:30:78.18:0,78,796	0/0:29,0:29:75.16:0,75,764	0/0:25,0:25:66.14:0,66,673	0/0:26,0:26:78.17:0,78,794	0/0:31,0:31:78.16:0,78,795	0/0:31,0:31:87.20:0,87,887	0/0:35,0:35:99:0,102,1026	0/0:33,0:33:90.20:0,90,918	1/1:5,28:33:72.23:906,72,0	0/0:24,0:24:69.15:0,69,702	0/0:21,0:21:63.14:0,63,643	0/0:21,0:21:51.11:0,51,520	0/0:22,0:22:57.11:0,57,574	0/0:44,0:45:99:0,122,1223	0/0:14,0:14:36.08:0,36,367	0/0:15,0:15:42.09:0,42,428	0/0:25,0:25:57.11:0,57,574	0/0:17,0:17:48.10:0,48,489	0/0:29,0:29:84.19:0,84,857	0/0:29,0:30:83.22:0,83,832	0/0:5,0:5:15.03:0,15,153
chr10	49818225	.	CTGTTTGTT	C	8094.73	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=5.643;DP=678;FS=3.592;HRun=0;HaplotypeScore=201.6452;InbreedingCoeff=0.9363;MQ=67.40;MQ0=3;MQRankSum=-11.989;QD=30.32;ReadPosRankSum=1.903;VQSLOD=4.5455;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:37:33.11:615,33,0	0/0:1,0:7:14.98:0,15,123	0/0:23,0:20:12.04:0,12,273	0/0:23,0:19:18.01:0,18,571	1/1:13,26:39:60.02:1306,60,0	0/0:21,0:21:45.15:0,45,1749	0/0:13,0:14:30.09:0,30,1068	0/0:22,0:31:39:0,39,419	0/0:19,0:19:45.15:0,45,1871	1/1:12,10:22:30.08:660,30,0	1/1:9,16:25:42.01:898,42,0	0/0:27,0:28:63.20:0,63,2347	0/0:20,0:20:45.15:0,45,1784	1/1:6,18:24:36.12:917,36,0	0/0:11,0:32:62.93:0,63,535	1/1:4,0:18:36.12:670,36,0	1/1:12,7:19:12.05:322,12,0	1/1:13,3:15:3.01:77,3,0	0/0:7,0:22:50.97:0,51,481	0/0:16,0:41:74.84:0,75,603	0/0:2,0:12:20.97:0,21,172	0/0:35,0:35:69.24:0,69,2655	0/0:29,0:29:48.14:0,48,1853	0/0:26,0:26:60.21:0,60,2409	1/1:14,14:28:42.10:1012,42,0	1/1:11,22:33:66.21:1593,66,0	0/0:7,0:27:57.42:0,57,498	1/1:6,0:6:2.99:24,3,0
chr10	49818661	.	A	AT	1300.56	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-6.320;DP=570;FS=5.438;HRun=8;HaplotypeScore=58.9481;InbreedingCoeff=0.9312;MQ=77.55;MQ0=0;MQRankSum=-2.098;QD=24.08;ReadPosRankSum=2.111;VQSLOD=4.6101;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,34:37:63.04:1006,63,0	0/0:10,0:10:27.01:0,27,247	0/0:16,0:15:25.77:0,26,250	0/0:18,0:16:4.60:0,5,160	0/0:17,0:17:39.02:0,39,357	0/0:25,0:25:61.73:0,62,597	0/0:15,0:15:45.02:0,45,412	0/0:33,0:33:84.03:0,84,765	0/0:14,0:14:42:0,42,379	0/0:30,0:30:81.04:0,81,741	0/0:24,0:24:66.03:0,66,604	0/0:22,1:23:31.40:0,31,537	0/0:19,0:19:50.99:0,51,456	0/0:18,0:18:48.02:0,48,439	0/0:21,0:21:51:0,51,462	1/1:4,13:17:36.11:416,36,0	0/0:18,0:18:45.02:0,45,412	0/0:13,0:13:38.92:0,39,346	0/0:23,0:23:57.01:0,57,517	0/0:27,0:27:57:0,57,522	0/0:17,0:17:51.03:0,51,467	0/0:19,0:19:51.01:0,51,467	0/0:27,0:27:63.01:0,63,572	0/0:14,0:14:42.02:0,42,384	0/0:17,0:17:45.02:0,45,412	0/0:26,0:25:69.03:0,69,632	0/0:24,0:24:68.99:0,69,623	0/0:8,0:8:21.01:0,21,192
chr10	49827328	.	CT	C	388.80	PASS	AB=0.879;AC=8;AF=0.154;AN=52;BaseQRankSum=-0.356;DP=589;FS=7.795;HRun=2;HaplotypeScore=114.9285;InbreedingCoeff=-0.0304;MQ=38.35;MQ0=73;MQRankSum=-4.723;QD=2.40;ReadPosRankSum=1.589;VQSLOD=-0.5207;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:17,7:18:7.19:0,7,18	1/1:3,3:5:1.71:36,2,0	./.	./.	0/0:22,1:22:26.05:0,26,231	0/0:30,0:25:44.58:0,45,504	0/0:39,0:30:48.64:0,49,452	0/0:18,0:14:27.78:0,28,80	0/0:32,0:28:31.28:0,31,226	0/1:20,2:17:99:142,0,265	0/0:9,2:11:15.26:0,15,134	0/0:20,0:17:38.76:0,39,376	0/0:19,0:16:23.07:0,23,379	0/0:24,0:20:30.50:0,30,208	0/1:25,6:25:19.85:58,0,20	0/1:13,8:20:40.51:65,0,41	0/1:19,0:17:8.32:8,0,215	0/1:25,1:18:42.33:42,0,206	0/0:16,0:14:34.28:0,34,300	0/0:11,0:10:22.32:0,22,252	0/0:25,1:19:41.68:0,42,400	0/0:11,0:8:8.70:0,9,198	0/0:19,0:15:19.87:0,20,178	0/0:42,0:37:46.29:0,46,480	0/0:24,2:21:0.67:0,1,263	0/1:31,5:30:99:163,0,406	0/0:21,0:20:5.20:0,5,286	0/0:14,1:12:6.33:0,6,204
chr10	49827365	.	CTGTGTGTGTGTGTG	C	2523.77	PASS	AB=0.867;AC=13;AF=0.260;AN=50;BaseQRankSum=7.195;DP=602;FS=5.392;HRun=0;HaplotypeScore=213.0645;InbreedingCoeff=0.3701;MQ=37.01;MQ0=44;MQRankSum=-6.012;QD=13.72;ReadPosRankSum=0.178;VQSLOD=2.3462;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	1/1:3,0:5:6.02:172,6,0	./.	./.	0/1:15,1:17:0:0,0,0	0/0:32,0:30:27.09:0,27,1627	0/0:31,0:24:28.67:0,29,1285	0/0:20,0:18:30.10:0,30,1078	0/0:32,0:28:21.07:0,21,1025	1/1:11,5:14:13.30:587,13,0	1/1:5,1:8:0.47:1,0,0	0/0:33,0:28:45.63:0,46,2419	0/0:23,0:20:36.12:0,36,1855	0/1:22,4:26:50.78:112,0,51	0/0:29,0:32:2.63:0,3,18	1/1:23,0:22:12.12:369,12,0	0/1:16,1:16:30.19:276,0,30	0/1:25,1:20:66.62:108,0,67	0/0:14,0:14:27.09:0,27,1286	0/0:10,0:10:0.47:0,0,1	0/0:27,0:22:14.59:0,15,1184	0/0:14,0:14:24.08:0,24,1280	0/0:21,0:19:27.09:0,27,1299	0/0:44,0:39:45.15:0,45,2298	0/0:22,4:22:3:0,3,36	0/1:30,10:37:64.33:1040,0,64	0/0:19,0:19:8.96:0,9,320	0/0:12,0:10:8.25:0,8,124
chr10	49827923	.	C	CT	2987.08	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-10.958;DP=786;FS=2.102;HRun=1;HaplotypeScore=72.1560;InbreedingCoeff=0.9978;MQ=87.32;MQ0=0;MQRankSum=-5.983;QD=37.81;ReadPosRankSum=4.640;VQSLOD=4.2019;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,44:46:99:1844,123,0	0/0:12,0:12:36.12:0,36,467	0/0:29,0:30:81.26:0,81,1032	0/0:33,0:33:90.29:0,90,1157	0/0:24,0:24:72.23:0,72,934	0/0:19,0:18:57.17:0,57,723	0/0:27,0:27:75.24:0,75,973	0/0:29,0:29:84.27:0,84,1079	0/0:30,0:30:90.27:0,90,1139	0/0:30,0:30:84.26:0,84,1078	0/0:22,0:22:63.20:0,63,817	0/0:40,0:40:99:0,120,1529	0/0:29,0:29:87.28:0,87,1128	0/0:26,0:26:78.25:0,78,1012	0/0:44,0:44:99:0,132,1713	1/1:2,31:33:51.35:1265,51,0	0/0:35,0:35:99:0,102,1322	0/0:19,0:19:57.19:0,57,740	0/0:23,0:23:66.21:0,66,844	0/0:27,0:27:81.26:0,81,1052	0/0:33,0:33:99:0,99,1286	0/0:19,0:19:57.17:0,57,726	0/0:34,0:34:96.31:0,96,1246	0/0:29,0:29:84.21:0,84,1054	0/0:27,0:27:78.25:0,78,1012	0/0:26,0:26:75.23:0,75,959	0/0:32,0:32:93.30:0,93,1207	0/0:8,0:8:21.07:0,21,271
chr10	49828759	.	CT	C	473.57	PASS	AB=0.912;AC=8;AF=0.143;AN=56;BaseQRankSum=1.982;DP=581;FS=6.610;HRun=13;HaplotypeScore=89.7209;InbreedingCoeff=0.4314;MQ=65.62;MQ0=9;MQRankSum=-1.222;QD=5.78;ReadPosRankSum=-1.135;VQSLOD=2.2778;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:44.30:0,44,526	1/1:4,8:12:32.81:240,33,0	0/0:28,1:10:7.69:0,8,46	0/0:36,0:9:8.70:0,9,44	0/0:32,0:32:53.67:0,54,464	0/0:16,0:16:41.88:0,42,381	0/0:19,1:20:14.35:0,14,397	0/0:23,0:30:46.11:0,46,238	0/1:3,1:4:9.81:10,0,68	0/1:11,1:12:16.44:16,0,161	0/0:18,0:19:40.89:0,41,389	0/1:15,0:15:3.14:3,0,255	0/0:15,1:16:21.85:0,22,334	0/0:24,0:25:47.88:0,48,435	1/1:10,15:27:48.53:338,49,0	0/0:9,0:10:25.53:0,26,219	0/0:42,0:42:11.73:0,12,522	0/0:10,0:10:17.64:0,18,143	0/0:30,1:35:15.85:0,16,144	0/0:7,0:19:14.55:0,15,70	0/0:3,0:9:5.70:0,6,43	0/1:11,1:12:0.89:1,0,150	0/0:18,0:18:33.05:0,33,321	0/0:7,0:7:21.02:0,21,198	0/0:14,1:16:27.04:0,27,261	0/0:20,1:22:28.06:0,28,321	0/0:24,0:34:21.83:0,22,199	0/0:21,0:21:13.61:0,14,382
chr10	49828779	.	CT	C	2935.09	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-0.284;DP=542;FS=6.033;HRun=10;HaplotypeScore=71.7001;InbreedingCoeff=0.9392;MQ=60.06;MQ0=13;MQRankSum=-1.797;QD=13.34;ReadPosRankSum=4.053;VQSLOD=3.7216;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:60.12:0,60,636	1/1:4,6:10:17.98:156,18,0	0/0:36,0:4:6.01:0,6,59	0/0:40,0:10:20.36:0,20,177	1/1:5,21:26:44.26:363,44,0	0/0:14,0:14:36.08:0,36,389	0/0:17,0:17:13.20:0,13,372	0/0:26,0:24:48.05:0,48,427	0/0:5,0:5:11.52:0,12,108	1/1:3,5:8:11.97:104,12,0	1/1:3,17:20:44.97:390,45,0	0/0:15,1:16:13.40:0,13,342	0/0:13,0:13:29.99:0,30,301	1/1:5,21:26:44.95:388,45,0	1/1:9,11:21:31.91:249,32,0	0/0:13,0:13:30.08:0,30,332	1/1:9,27:36:47.07:518,47,0	1/1:7,9:16:5.82:117,6,0	0/0:26,1:26:16.30:0,16,360	0/0:21,0:20:36.08:0,36,382	0/0:8,0:8:9.01:0,9,91	0/0:13,0:13:39.09:0,39,418	0/0:16,0:16:36.08:0,36,382	0/0:7,0:7:21.05:0,21,224	1/1:3,16:19:17.08:199,17,0	1/1:6,16:22:47.80:392,48,0	0/0:25,0:25:30.98:0,31,410	1/1:5,11:16:32.93:278,33,0
chr10	49828918	.	GA	G	3684.24	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=9.929;DP=490;FS=13.748;HRun=9;HaplotypeScore=48.2828;InbreedingCoeff=0.9580;MQ=72.60;MQ0=2;MQRankSum=0.773;QD=20.70;ReadPosRankSum=-1.396;VQSLOD=2.5308;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,36:40:90.04:824,90,0	1/1:2,7:9:21.01:192,21,0	0/0:14,0:9:11.96:0,12,110	0/0:13,0:11:1.33:0,1,67	0/0:19,0:19:54.15:0,54,613	0/0:20,0:20:51.15:0,51,588	0/0:17,0:18:47.93:0,48,504	1/1:3,21:24:59.97:534,60,0	0/0:11,0:11:24.07:0,24,277	0/0:15,0:15:27.08:0,27,312	0/0:17,0:17:48.14:0,48,552	0/0:15,0:15:39.09:0,39,433	0/0:13,0:13:36.06:0,36,390	0/0:17,0:17:36.11:0,36,415	1/1:1,15:15:33.02:302,33,0	1/1:1,13:14:36.02:329,36,0	0/0:31,0:31:78.22:0,78,888	0/0:13,0:13:36.05:0,36,400	1/1:2,21:23:56.99:515,57,0	1/1:1,15:16:42.02:384,42,0	1/1:3,13:16:36.02:329,36,0	0/0:9,0:9:24.07:0,24,277	0/0:23,0:23:66.17:0,66,738	0/0:19,0:19:54.16:0,54,621	0/0:20,0:20:48.13:0,48,544	0/0:17,0:17:48.08:0,48,522	1/1:3,17:20:30.01:274,30,0	0/0:6,0:6:18.05:0,18,208
chr10	49829096	.	T	TG	4318.99	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=8.106;DP=484;FS=4.330;HRun=1;HaplotypeScore=85.7087;InbreedingCoeff=0.9153;MQ=62.59;MQ0=16;MQRankSum=-4.512;QD=17.63;ReadPosRankSum=-0.456;VQSLOD=4.9105;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:14.98:0,15,124	0/0:2,0:2:2.99:0,3,23	0/0:28,0:10:11.47:0,11,88	0/0:31,0:10:9.26:0,9,96	1/1:19,1:19:50.19:390,50,0	0/0:20,0:20:51.12:0,51,619	0/0:18,0:18:53.76:0,54,610	1/1:18,3:20:53.92:508,54,0	0/0:7,0:7:21.05:0,21,246	1/1:13,0:11:26.66:196,27,0	1/1:22,0:21:50.30:399,50,0	0/0:16,0:15:42.66:0,43,459	0/0:20,0:18:48.12:0,48,581	1/1:14,0:13:14.95:130,15,0	0/0:11,0:10:2.95:0,3,19	0/0:12,0:12:31.22:0,31,243	1/1:17,1:16:4.77:145,5,0	1/1:12,0:12:32.81:274,33,0	1/1:20,1:20:45.20:425,45,0	1/1:20,1:21:45.78:354,46,0	1/1:16,0:15:31.85:240,32,0	0/0:9,0:9:24.06:0,24,286	0/0:10,0:10:30.08:0,30,362	0/0:29,0:29:87.23:0,87,1079	1/1:19,0:19:38.05:378,38,0	1/1:21,0:19:51.94:403,52,0	1/1:18,2:20:45.62:347,46,0	1/1:7,0:7:17.83:131,18,0
chr10	49829097	.	G	GGTT	8423.65	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=5.608;DP=527;FS=4.097;HRun=0;HaplotypeScore=112.4951;InbreedingCoeff=0.9143;MQ=61.59;MQ0=17;MQRankSum=-3.785;QD=30.52;ReadPosRankSum=-3.048;VQSLOD=4.0469;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:14.88:0,15,146	0/0:2,0:3:3.01:0,3,34	0/0:31,0:11:3.78:0,4,147	0/0:34,0:11:7.90:0,8,122	1/1:5,16:25:65.48:1065,65,0	0/0:22,0:22:51.15:0,51,870	0/0:19,0:19:47.68:0,48,814	1/1:5,0:20:53.95:545,54,0	0/0:7,0:7:21.05:0,21,329	1/1:10,7:14:35.91:622,36,0	1/1:16,12:27:66.49:1100,66,0	0/0:17,0:16:17.97:0,18,642	0/0:21,0:19:48.08:0,48,777	1/1:4,13:17:24.08:499,24,0	0/0:12,0:11:2.20:0,2,8	0/0:12,0:12:24.97:0,25,243	1/1:5,11:16:20.50:382,20,0	1/1:9,4:14:35.96:502,36,0	1/1:20,0:21:37.27:445,37,0	1/1:19,0:21:38.76:364,39,0	1/1:15,0:16:31.63:232,32,0	0/0:10,0:10:24.05:0,24,385	0/0:10,0:10:29.92:0,30,484	0/0:29,0:29:87.29:0,87,1538	1/1:12,10:22:47.78:925,48,0	1/1:3,19:21:55.59:1069,56,0	1/1:15,0:20:39.69:337,40,0	1/1:4,4:8:21.03:339,21,0
chr10	49829100	.	TTTTTTGTTTTTTTTTG	T	3777.26	PASS	AB=0.986;AC=20;AF=0.357;AN=56;BaseQRankSum=-0.056;DP=532;FS=11.451;HRun=0;HaplotypeScore=215.4670;InbreedingCoeff=0.5912;MQ=60.45;MQ0=22;MQRankSum=0.067;QD=18.52;ReadPosRankSum=-3.538;VQSLOD=0.8093;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:4,21:25:9.03:351,9,0	1/1:3,0:3:3.01:88,3,0	0/0:33,0:11:9.91:0,10,246	0/0:35,0:11:26.32:0,26,355	0/0:27,0:25:46.32:0,46,2010	0/0:24,0:24:57.05:0,57,2688	0/0:18,0:18:49.36:0,49,2662	1/1:21,0:18:34.79:271,35,0	0/0:6,0:6:14.94:0,15,503	0/1:16,0:14:20.81:21,0,596	0/0:27,0:26:17.93:0,18,1695	0/0:17,0:16:46.36:0,46,1758	0/0:20,0:18:44.99:0,45,2459	0/0:18,0:17:2.73:0,3,685	0/1:14,0:13:17.42:80,0,17	1/1:11,2:13:29.34:576,29,0	0/0:19,0:17:30.07:0,30,1035	0/0:14,0:14:2.70:0,3,647	1/1:24,0:21:31.45:560,31,0	1/1:21,0:20:40.82:461,41,0	1/1:16,0:15:25.45:441,25,0	0/0:9,0:9:21.04:0,21,1383	0/0:10,0:10:26.99:0,27,1392	0/0:29,0:29:84.23:0,84,5048	0/0:21,0:21:13.91:0,14,1307	0/1:23,0:21:21.75:22,0,1244	1/1:19,0:19:47.95:860,48,0	0/1:8,0:8:46.27:46,0,167
chr10	49829102	.	TTTTGTTTTTTTTTG	T	3735.63	PASS	AB=0.934;AC=23;AF=0.411;AN=56;BaseQRankSum=0.244;DP=527;FS=7.941;HRun=0;HaplotypeScore=195.2766;InbreedingCoeff=0.4328;MQ=59.93;MQ0=23;MQRankSum=-0.469;QD=15.25;ReadPosRankSum=-4.174;VQSLOD=0.8965;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:24:9.03:306,9,0	1/1:2,1:3:3.01:123,3,0	0/0:35,0:11:8.53:0,9,191	0/0:39,0:11:26.57:0,27,330	0/0:28,0:26:10.48:0,10,1550	0/0:24,0:24:57.02:0,57,2317	0/0:20,0:20:55.18:0,55,2423	1/1:20,0:17:37.09:335,37,0	0/0:5,0:5:14.99:0,15,449	0/1:18,0:15:60.17:60,0,439	0/0:29,0:28:12.47:0,12,1301	0/0:17,0:16:46.02:0,46,1550	0/0:19,0:17:45.01:0,45,2153	0/1:18,0:17:11.81:12,0,570	0/1:2,12:13:23.18:114,0,23	1/1:11,0:11:29.70:550,30,0	0/0:19,0:17:28.38:0,28,876	0/1:13,0:13:28.76:29,0,493	1/1:21,0:18:25.55:529,26,0	1/1:20,0:19:41.70:431,42,0	1/1:15,0:14:25.78:379,26,0	0/0:8,0:8:21.07:0,21,1221	0/0:10,0:10:26.98:0,27,1235	0/0:29,0:29:87.27:0,87,4493	0/1:21,0:21:16.58:17,0,1011	0/1:23,0:21:32.57:33,0,911	1/1:18,0:18:47.90:773,48,0	0/1:6,0:6:46.52:47,0,126
chr10	49829108	.	TTTTTTTTG	T	1218.23	PASS	AB=0.983;AC=20;AF=0.357;AN=56;BaseQRankSum=3.741;DP=554;FS=4.670;HRun=0;HaplotypeScore=159.8726;InbreedingCoeff=0.2406;MQ=60.10;MQ0=28;MQRankSum=-3.505;QD=4.70;ReadPosRankSum=-3.827;VQSLOD=1.3317;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:24:10.56:144,11,0	1/1:3,0:3:3.01:59,3,0	0/0:42,0:13:12.64:0,13,137	0/0:48,0:12:16.53:0,17,187	0/1:32,0:30:27.36:27,0,811	0/0:24,0:24:55.68:0,56,1344	0/0:19,0:19:29.22:0,29,1473	1/1:17,0:14:7.15:69,7,0	0/0:7,0:7:8.87:0,9,261	0/1:22,0:19:59.27:59,0,223	0/1:27,0:26:30.57:31,0,710	0/0:18,0:16:44.82:0,45,935	0/0:20,0:17:38.86:0,39,1303	0/0:15,0:14:2.89:0,3,372	1/1:14,0:13:0.30:52,0,0	0/1:10,0:10:63.06:217,0,63	0/0:21,0:19:29.60:0,30,462	0/1:14,0:14:29.33:29,0,293	0/1:21,0:17:37.60:123,0,38	1/1:20,0:19:5.35:93,5,0	0/1:11,2:12:2.84:99,0,3	0/0:10,0:10:27.09:0,27,811	0/0:10,0:10:19.99:0,20,706	0/0:29,0:29:86.95:0,87,2600	0/0:20,0:20:15.60:0,16,674	0/1:23,0:21:50.32:50,0,376	1/1:16,3:19:22.97:340,23,0	0/0:10,0:9:5.61:0,6,86
chr10	49829114	.	TTG	T	3494.69	PASS	AB=1.000;AC=38;AF=0.679;AN=56;BaseQRankSum=9.384;DP=573;FS=28.484;HRun=0;HaplotypeScore=106.0276;InbreedingCoeff=0.5090;MQ=57.13;MQ0=28;MQRankSum=-4.867;QD=8.32;ReadPosRankSum=-3.619;VQSLOD=1.2268;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:24:11.67:78,12,0	1/1:3,0:3:2.98:21,3,0	0/1:43,0:11:1.92:2,0,76	0/0:50,0:11:3.42:0,3,66	1/1:31,2:31:60.72:400,61,0	0/0:25,0:25:16.56:0,17,444	0/0:19,0:19:20.04:0,20,455	1/1:22,0:19:41.70:355,42,0	0/0:7,0:7:14.59:0,15,136	1/1:21,0:18:23.04:304,23,0	1/1:28,0:27:65.64:414,66,0	0/0:20,0:18:39.20:0,39,368	0/1:21,0:18:1.08:1,0,371	1/1:15,0:14:9.52:77,10,0	1/1:14,0:13:3.77:21,4,0	1/1:12,0:12:20.19:178,20,0	1/1:21,1:20:17.72:198,18,0	1/1:14,0:14:13.96:143,14,0	0/1:18,0:14:1.43:159,0,1	1/1:21,0:20:7.19:135,7,0	0/1:13,0:13:9.87:54,0,10	0/1:14,0:14:12.98:13,0,314	0/1:12,0:12:19.27:19,0,221	0/0:32,0:32:95.04:0,95,1048	1/1:19,1:20:41.67:282,42,0	1/1:22,1:21:55.75:417,56,0	1/1:18,0:18:25.97:175,26,0	1/1:8,0:7:5.99:50,6,0
chr10	49829115	.	TG	T	4259.85	PASS	AB=0.980;AC=41;AF=0.732;AN=56;BaseQRankSum=9.365;DP=553;FS=32.332;HRun=1;HaplotypeScore=91.7759;InbreedingCoeff=0.2727;MQ=58.29;MQ0=27;MQRankSum=-6.035;QD=8.61;ReadPosRankSum=-2.461;VQSLOD=0.2420;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:24:11.14:62,11,0	1/1:3,0:3:2.88:15,3,0	0/1:38,3:11:8.16:8,0,67	0/1:47,3:11:4.01:4,0,47	1/1:28,4:30:80.19:534,80,0	0/1:24,0:24:2.91:3,0,314	0/1:19,0:19:8.30:8,0,318	1/1:20,1:18:40.06:338,40,0	0/0:6,0:6:14.48:0,14,103	1/1:8,13:18:34.65:376,35,0	1/1:22,6:27:72.25:558,72,0	0/0:20,0:18:28.93:0,29,287	0/1:21,0:18:35.54:36,0,272	1/1:13,2:14:22.08:170,22,0	1/1:14,0:13:4.91:22,5,0	1/1:10,1:11:25.16:187,25,0	1/1:19,3:20:25.69:303,26,0	1/1:10,4:14:24.23:228,24,0	0/1:15,1:12:2.58:156,0,3	1/1:17,1:17:8.71:131,9,0	0/1:12,0:11:28.40:47,0,28	0/1:14,0:14:15.47:15,0,240	0/1:12,0:12:5.79:6,0,175	0/0:32,0:32:83.85:0,84,810	1/1:14,6:20:48.32:360,48,0	1/1:20,2:20:59.08:481,59,0	1/1:13,0:13:24.45:149,24,0	1/1:2,6:7:6.01:63,6,0
chr10	49829124	.	T	TG	1277.83	PASS	AB=0.974;AC=13;AF=0.232;AN=56;BaseQRankSum=4.051;DP=537;FS=22.752;HRun=0;HaplotypeScore=93.3376;InbreedingCoeff=0.3356;MQ=59.31;MQ0=25;MQRankSum=-1.215;QD=7.26;ReadPosRankSum=1.248;VQSLOD=1.8833;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:14.95:0,15,136	0/0:3,0:3:2.98:0,3,22	0/0:40,0:11:21.48:0,21,219	0/0:47,0:11:11.38:0,11,157	1/1:29,2:30:4.32:314,4,0	0/0:23,0:23:53.31:0,53,556	0/0:19,0:19:52.94:0,53,510	0/0:22,0:20:50.69:0,51,421	0/0:7,0:7:17.97:0,18,191	1/1:20,0:17:1.59:166,2,0	0/1:26,1:26:36.70:282,0,37	0/0:17,0:15:34.44:0,34,314	0/0:22,0:19:52.50:0,52,493	0/1:15,0:14:34.29:61,0,34	0/0:15,0:14:10.15:0,10,67	0/0:9,0:9:26.93:0,27,231	0/1:22,1:21:99:114,0,106	0/1:14,0:14:28.73:131,0,29	0/0:15,0:11:27.14:0,27,171	0/0:15,0:14:37.22:0,37,269	0/0:11,0:10:21.23:0,21,168	0/0:16,0:16:40.64:0,41,458	0/0:14,0:14:39.80:0,40,378	0/0:29,0:29:84.14:0,84,981	1/1:19,0:19:22.25:194,22,0	0/1:17,1:17:90.84:153,0,91	0/0:9,0:9:22.22:0,22,143	1/1:8,0:7:4.69:20,5,0
chr10	49834819	.	CT	C	1622.80	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.621;DP=682;FS=7.753;HRun=1;HaplotypeScore=77.2570;InbreedingCoeff=0.9985;MQ=52.31;MQ0=0;MQRankSum=-1.605;QD=32.46;ReadPosRankSum=0.440;VQSLOD=2.7531;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:87.30:0,87,1386	1/1:1,14:15:42.14:542,42,0	0/0:20,0:9:24.08:0,24,384	0/0:27,0:16:38.84:0,39,637	0/0:27,0:27:75.26:0,75,1195	0/0:17,0:17:45.15:0,45,713	0/0:13,0:13:39.13:0,39,622	0/0:36,0:36:99:0,108,1726	0/0:25,0:25:63.21:0,63,1005	0/0:14,0:14:39.13:0,39,621	0/0:16,0:16:42.14:0,42,670	0/0:39,0:39:99:0,108,1720	0/0:21,0:21:57.19:0,57,909	0/0:27,0:27:75.26:0,75,1196	1/1:0,35:35:93.30:1203,93,0	0/0:20,0:20:54.13:0,54,810	0/0:42,0:42:99:0,120,1868	0/0:24,0:23:69.21:0,69,1069	0/0:15,0:15:45.14:0,45,696	0/0:25,0:25:75.22:0,75,1135	0/0:36,0:36:99:0,108,1727	0/0:26,0:26:57.19:0,57,908	0/0:16,0:16:39.13:0,39,621	0/0:26,0:26:78.27:0,78,1247	0/0:30,0:30:84.24:0,84,1311	0/0:27,0:27:81.25:0,81,1241	0/0:23,0:23:63.17:0,63,976	0/0:10,0:10:30.10:0,30,479
chr10	49835849	.	CTG	C	1509.38	PASS	AC=20;AF=0.667;AN=30;BaseQRankSum=2.754;DP=363;FS=0.000;HRun=0;HaplotypeScore=48.3257;InbreedingCoeff=0.7137;MQ=18.70;MQ0=245;MQRankSum=-1.649;QD=10.86;ReadPosRankSum=1.432;VQSLOD=3.1793;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	0/0:6,0:4:12.04:0,12,222	./.	./.	1/1:2,20:15:12.04:175,12,0	./.	./.	./.	./.	1/1:1,10:8:17.86:261,18,0	1/1:3,7:7:3.01:44,3,0	0/0:9,0:1:3.01:0,3,56	0/0:17,0:3:5.93:0,6,73	1/1:3,9:1:2.94:18,3,0	./.	1/1:2,10:3:5.92:86,6,0	./.	./.	./.	1/1:1,13:11:24.08:351,24,0	./.	0/0:15,0:10:12.04:0,12,221	0/0:18,0:13:12.04:0,12,201	./.	1/1:1,14:13:12.04:176,12,0	1/1:0,16:7:18.06:264,18,0	1/1:0,14:8:9.03:133,9,0	1/1:1,12:10:9.03:132,9,0
chr10	49836816	.	A	AAGACCCTTTTATTTG	28957.71	PASS	AB=0.767;AC=54;AF=0.964;AN=56;BaseQRankSum=0.287;DP=324;FS=46.922;HRun=0;HaplotypeScore=389.0181;InbreedingCoeff=-0.0491;MQ=71.90;MQ0=0;MQRankSum=-3.524;QD=89.38;ReadPosRankSum=2.364;VQSLOD=3.4537;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:11:24.08:1007,24,0	1/1:2,0:2:6.02:295,6,0	0/1:9,1:11:19.66:863,0,20	0/1:6,1:11:27.80:951,0,28	1/1:10,0:10:18.06:823,18,0	1/1:9,0:9:24.08:1167,24,0	1/1:14,0:14:24.08:879,24,0	1/1:13,0:13:39.12:1538,39,0	1/1:13,0:13:33.11:1431,33,0	1/1:14,0:14:34.35:1318,34,0	1/1:9,0:9:17.76:415,18,0	1/1:11,0:11:18.06:859,18,0	1/1:11,0:11:21.07:882,21,0	1/1:15,0:15:27.08:1140,27,0	1/1:20,0:20:45.15:1957,45,0	1/1:11,0:11:27.09:1180,27,0	1/1:10,0:10:21.07:1081,21,0	1/1:5,0:5:9.03:348,9,0	1/1:11,0:11:30.08:1253,30,0	1/1:17,0:17:33.11:1510,33,0	1/1:10,0:10:24.04:949,24,0	1/1:14,0:14:33.11:1553,33,0	1/1:16,0:16:26.92:887,27,0	1/1:6,0:6:9.03:302,9,0	1/1:13,0:13:30.99:1377,31,0	1/1:20,0:20:40.36:1670,40,0	1/1:12,0:12:24.08:1043,24,0	1/1:5,0:5:8.62:280,9,0
chr10	49836817	.	A	AGACCCTTTTATCCAGCACAGTGT	47059.44	PASS	AB=0.738;AC=54;AF=0.964;AN=56;BaseQRankSum=-0.652;DP=308;FS=52.024;HRun=0;HaplotypeScore=365.0152;InbreedingCoeff=-0.0459;MQ=64.13;MQ0=0;MQRankSum=-3.597;QD=152.79;ReadPosRankSum=2.435;VQSLOD=3.1481;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:11:25.02:1737,25,0	1/1:2,0:2:6.02:580,6,0	0/1:3,0:9:25.71:735,0,26	0/1:6,1:7:33.82:698,0,34	1/1:10,0:10:21.07:1418,21,0	1/1:9,0:9:24.08:1642,24,0	1/1:14,0:14:39:1743,39,0	1/1:13,0:13:39.12:2390,39,0	1/1:13,0:13:39.13:2419,39,0	1/1:12,0:12:36.11:2175,36,0	1/1:9,0:9:18.06:692,18,0	1/1:10,0:10:21.07:1690,21,0	1/1:11,0:11:24.08:1539,24,0	1/1:13,0:13:30.09:1727,30,0	1/1:19,0:19:48.16:3172,48,0	1/1:10,0:10:27.09:2156,27,0	1/1:9,0:9:21.07:1920,21,0	1/1:5,0:5:15.05:490,15,0	1/1:11,0:11:30.10:2179,30,0	1/1:16,0:16:33.11:2618,33,0	1/1:9,0:9:24.04:1009,24,0	1/1:14,0:14:33.11:2422,33,0	1/1:16,0:16:27.09:1320,27,0	1/1:6,0:6:9.03:423,9,0	1/1:13,0:13:33.11:2207,33,0	1/1:20,0:20:53.80:3111,54,0	1/1:12,0:12:30.10:2023,30,0	1/1:5,0:5:12.04:824,12,0
chr10	49837790	.	T	TGTG	29649.20	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-16.334;DP=734;FS=2.059;HRun=0;HaplotypeScore=100.1151;InbreedingCoeff=0.9992;MQ=79.74;MQ0=0;MQRankSum=-5.927;QD=59.66;ReadPosRankSum=3.616;VQSLOD=7.0011;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,39:43:96.33:2269,96,0	1/1:1,8:10:23.79:567,24,0	0/0:22,0:22:57.19:0,57,952	0/0:21,0:21:36.10:0,36,801	1/1:1,25:29:65.98:1492,66,0	0/0:18,0:18:51.17:0,51,878	0/0:28,0:28:81.26:0,81,1394	1/1:3,40:46:99:2966,135,0	0/0:22,0:22:66.23:0,66,1160	1/1:3,24:28:81.28:1820,81,0	1/1:4,9:15:27.04:600,27,0	0/0:20,0:20:60.21:0,60,1058	0/0:30,0:30:90.31:0,90,1583	1/1:1,29:30:81.28:1912,81,0	1/1:2,30:32:81.28:1914,81,0	1/1:4,31:35:87.30:2011,87,0	1/1:3,38:41:99:2341,99,0	1/1:1,21:22:60.19:1339,60,0	1/1:2,13:16:45.15:1061,45,0	1/1:0,29:29:81.28:1915,81,0	1/1:0,14:16:34.95:849,35,0	0/0:19,0:19:57.19:0,57,985	0/0:22,0:22:63.20:0,63,1036	0/0:35,0:35:99:0,105,1842	1/1:1,23:27:63.22:1489,63,0	1/1:2,35:37:99:2553,111,0	1/1:2,31:33:84.29:1984,84,0	1/1:0,8:8:24.08:567,24,0
chr10	49838686	.	GA	G	520.64	PASS	AB=0.522;AC=3;AF=0.054;AN=56;BaseQRankSum=5.555;DP=566;FS=57.301;HRun=2;HaplotypeScore=70.8803;InbreedingCoeff=0.6900;MQ=78.66;MQ0=0;MQRankSum=-4.006;QD=27.40;ReadPosRankSum=0.714;VQSLOD=-0.5136;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,7:7:18.06:233,18,0	0/0:12,0:12:36.11:0,36,516	0/0:14,0:14:38.18:0,38,479	0/0:11,0:12:20.97:0,21,235	0/0:23,0:23:66.22:0,66,976	0/0:25,0:25:72.24:0,72,1079	0/0:19,0:19:57.17:0,57,831	0/0:38,0:38:99:0,111,1612	0/0:20,0:20:60.15:0,60,837	0/0:22,0:22:66.22:0,66,989	0/0:16,0:16:48.15:0,48,687	0/0:23,0:23:66.21:0,66,968	0/0:21,0:21:63.18:0,63,900	0/0:25,0:25:75.21:0,75,1063	0/0:27,0:27:81.25:0,81,1173	0/1:1,11:12:8.80:391,0,9	0/0:28,0:28:78.24:0,78,1125	0/0:26,0:26:78.23:0,78,1128	0/0:21,0:21:57.19:0,57,843	0/0:14,0:14:42.14:0,42,629	0/0:18,0:18:54.18:0,54,809	0/0:12,0:12:36.12:0,36,526	0/0:16,0:16:48.16:0,48,718	0/0:29,0:29:87.19:0,87,1194	0/0:28,0:28:84.27:0,84,1237	0/0:23,0:23:66.22:0,66,970	0/0:27,0:27:78.26:0,78,1166	0/0:8,0:8:24.08:0,24,360
chr10	49838772	.	A	AT	1268.63	PASS	AB=0.517;AC=3;AF=0.054;AN=56;BaseQRankSum=-2.494;DP=623;FS=8.543;HRun=1;HaplotypeScore=74.7483;InbreedingCoeff=0.7903;MQ=93.31;MQ0=0;MQRankSum=-3.981;QD=33.39;ReadPosRankSum=0.994;VQSLOD=2.8714;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,20:23:63.17:916,63,0	0/0:14,0:14:42.12:0,42,530	0/0:29,0:29:74.61:0,75,926	0/0:24,0:25:59.89:0,60,764	0/0:34,0:34:99:0,102,1309	0/0:25,0:25:75.24:0,75,973	0/0:22,0:22:66.21:0,66,857	0/0:18,0:18:45.15:0,45,584	0/0:17,0:17:42.14:0,42,545	0/0:27,0:27:81.26:0,81,1052	0/0:13,0:13:39.13:0,39,506	0/0:22,0:22:66.21:0,66,849	0/0:23,0:23:69.22:0,69,896	0/0:27,0:27:81.24:0,81,1036	0/0:21,0:21:63.20:0,63,818	0/1:1,14:15:2.84:458,0,3	0/0:26,0:26:75.20:0,75,942	0/0:17,0:17:51.17:0,51,661	0/0:23,0:23:66.21:0,66,856	0/0:20,0:20:60.20:0,60,779	0/0:34,0:34:99:0,99,1254	0/0:24,0:24:72.23:0,72,932	0/0:10,0:10:30.08:0,30,374	0/0:19,0:19:54.18:0,54,701	0/0:24,0:24:72.23:0,72,935	0/0:32,0:32:93.30:0,93,1208	0/0:25,0:25:75.23:0,75,958	0/0:14,0:14:42.14:0,42,545
chr10	49839695	.	T	TAA	9986.11	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=5.237;DP=569;FS=0.000;HRun=6;HaplotypeScore=94.6381;InbreedingCoeff=0.9938;MQ=82.94;MQ0=1;MQRankSum=-5.663;QD=34.20;ReadPosRankSum=2.802;VQSLOD=4.4088;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,0:17:10.51:112,11,0	1/1:0,0:10:24.95:88,25,0	0/0:20,0:20:54.14:0,54,637	0/0:14,0:14:36.11:0,36,426	1/1:4,24:28:72.12:1125,72,0	0/0:15,0:15:42.13:0,42,512	0/0:17,0:17:45.12:0,45,536	0/0:30,0:30:81.19:0,81,951	0/0:13,0:13:36.11:0,36,439	1/1:4,26:30:84.27:1392,84,0	1/1:5,18:23:54.14:882,54,0	0/0:15,0:15:42.12:0,42,500	0/0:25,0:25:66.15:0,66,766	1/1:4,15:19:42.14:710,42,0	1/1:1,0:18:39.93:140,40,0	1/1:2,0:21:50.89:205,51,0	1/1:3,25:28:75.26:1268,75,0	1/1:0,24:25:66.23:1116,66,0	0/0:27,0:27:66.19:0,66,795	0/0:22,0:22:51.13:0,51,608	0/0:12,0:12:33.08:0,33,387	0/0:15,0:15:42.10:0,42,488	0/0:14,0:14:42.13:0,42,510	0/0:13,0:13:36.09:0,36,425	1/1:2,22:25:66.18:1085,66,0	1/1:8,24:32:81.14:1252,81,0	0/0:25,0:25:75.24:0,75,915	1/1:0,14:14:36.12:609,36,0
chr10	49839768	.	AGGAACACACAG	A	4238.92	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.100;DP=687;FS=2.898;HRun=0;HaplotypeScore=244.7530;InbreedingCoeff=0.9978;MQ=85.52;MQ0=0;MQRankSum=-10.471;QD=69.49;ReadPosRankSum=0.112;VQSLOD=4.6203;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,32:39:69.24:2440,69,0	0/0:12,0:12:36.12:0,36,1969	0/0:23,0:23:66.23:0,66,3342	0/0:26,0:25:54.09:0,54,2905	0/0:24,0:24:72.04:0,72,3587	0/0:22,0:22:66.23:0,66,3810	0/0:21,0:21:60.21:0,60,3292	0/0:30,0:30:78.26:0,78,3748	0/0:28,0:28:84.29:0,84,4695	0/0:26,0:26:72.24:0,72,3526	0/0:24,0:24:66.08:0,66,3145	0/0:23,0:23:69.24:0,69,3931	0/0:25,0:25:72.25:0,72,3833	0/0:24,0:24:72.25:0,72,4045	0/0:26,0:26:75.24:0,75,4110	1/1:0,22:22:51.18:1799,51,0	0/0:35,0:35:99:0,102,5328	0/0:25,0:25:69.20:0,69,3295	0/0:28,0:28:84.27:0,84,4479	0/0:18,0:18:48.16:0,48,2669	0/0:38,0:38:99:0,114,6579	0/0:14,0:14:39.07:0,39,2072	0/0:15,0:15:39.13:0,39,2067	0/0:29,0:29:87.30:0,87,4944	0/0:26,0:26:72.24:0,72,3886	0/0:35,0:35:99:0,99,5335	0/0:22,0:22:63.22:0,63,3607	0/0:7,0:7:21.03:0,21,912
chr10	49841126	.	C	CAAAGAGAGAGAGAGAGAG	3523.71	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=2.959;DP=565;FS=34.397;HRun=0;HaplotypeScore=252.1868;InbreedingCoeff=0.2739;MQ=78.59;MQ0=3;MQRankSum=-4.198;QD=18.45;ReadPosRankSum=-3.838;VQSLOD=0.5514;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:39.13:0,39,1398	0/0:7,0:7:15.05:0,15,641	0/0:42,0:32:23.47:0,23,677	0/0:47,0:38:0.28:0,0,445	0/1:25,0:25:38.91:221,0,39	0/0:17,0:17:39.10:0,39,1364	0/0:13,0:13:20.64:0,21,582	0/1:25,0:24:73.83:94,0,74	0/0:20,0:20:39.13:0,39,1791	1/1:14,0:14:18.53:699,19,0	1/1:3,4:9:3.01:232,3,0	0/0:25,0:25:48.11:0,48,1625	0/0:22,0:22:44.90:0,45,1790	1/1:18,0:17:3.01:184,3,0	0/0:23,0:23:57.16:0,57,2334	0/0:27,0:27:36.12:0,36,1286	0/1:12,0:12:8.96:290,0,9	0/1:16,0:16:6.95:642,0,7	0/1:12,0:12:22.17:22,0,299	0/1:20,0:20:12.87:13,0,475	0/0:13,0:13:8:0,8,377	0/0:14,0:14:36.11:0,36,1251	0/0:25,0:25:54.17:0,54,2376	0/0:20,0:20:39.13:0,39,1793	1/1:13,0:13:3.01:236,3,0	0/1:23,0:23:6.85:819,0,7	0/0:33,0:33:1.58:0,2,943	1/1:4,0:4:8.98:72,9,0
chr10	49841128	.	A	AAGAG	6635.43	PASS	AB=0.961;AC=29;AF=0.518;AN=56;BaseQRankSum=1.701;DP=652;FS=0.000;HRun=0;HaplotypeScore=151.3251;InbreedingCoeff=0.8748;MQ=74.05;MQ0=3;MQRankSum=-4.516;QD=18.38;ReadPosRankSum=-4.347;VQSLOD=3.8203;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:24:35.92:0,36,344	0/0:8,0:8:18.05:0,18,253	0/0:44,0:33:23.87:0,24,389	0/1:47,0:39:0.39:0,0,267	1/1:15,0:33:6.02:88,6,0	0/0:17,0:17:33.11:0,33,545	0/0:13,0:13:12.36:0,12,287	1/1:18,12:32:57.04:969,57,0	0/0:21,0:21:45.12:0,45,694	1/1:16,0:26:47.47:658,47,0	1/1:13,0:14:8.79:122,9,0	0/0:24,0:25:45.13:0,45,692	0/0:22,0:22:39.13:0,39,641	1/1:14,0:19:12.04:202,12,0	0/0:22,0:23:57.16:0,57,869	0/0:8,0:28:35.91:0,36,322	1/1:15,0:15:10.59:158,11,0	1/1:8,0:18:3.01:53,3,0	1/1:4,9:14:35.85:739,36,0	1/1:6,15:24:44.89:998,45,0	1/1:4,9:18:20.81:454,21,0	0/0:15,0:15:36.07:0,36,518	0/0:27,0:27:54.18:0,54,889	0/0:20,0:22:45.11:0,45,648	1/1:7,0:22:9.28:142,9,0	1/1:34,0:32:63.11:900,63,0	1/1:18,10:35:73.07:1126,73,0	1/1:4,0:4:4.75:26,5,0
chr10	49841252	.	CA	C	2151.94	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=8.128;DP=479;FS=0.969;HRun=7;HaplotypeScore=48.3500;InbreedingCoeff=0.9878;MQ=74.43;MQ0=0;MQRankSum=0.318;QD=24.73;ReadPosRankSum=-3.025;VQSLOD=2.6654;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:30.09:0,30,373	0/0:11,0:11:24.08:0,24,302	0/0:12,0:11:27.07:0,27,323	0/0:9,0:9:12.26:0,12,175	0/0:38,0:38:99:0,105,1321	0/0:16,0:16:45.14:0,45,566	0/0:12,0:12:36.12:0,36,453	1/1:1,23:24:69.16:704,69,0	0/0:14,0:14:39.12:0,39,491	0/0:24,0:24:72.23:0,72,905	0/0:20,0:20:54.17:0,54,676	0/0:15,0:15:39.11:0,39,479	0/0:21,0:21:57.17:0,57,702	0/0:14,0:14:33.11:0,33,415	0/0:19,0:19:51.16:0,51,631	0/0:16,0:16:45.14:0,45,566	0/0:18,0:18:51.16:0,51,641	0/0:16,0:16:42.13:0,42,528	1/1:1,12:13:36.08:367,36,0	1/1:3,16:19:45.10:459,45,0	1/1:0,6:6:15.03:153,15,0	0/0:10,0:10:27.09:0,27,340	0/0:23,0:23:57.18:0,57,717	0/0:9,0:9:24.08:0,24,302	0/0:24,0:24:63.20:0,63,793	0/0:26,0:26:75.24:0,75,944	1/1:2,23:25:63.14:643,63,0	0/0:14,0:14:42.13:0,42,527
chr10	49841569	.	A	AAT	1963.02	PASS	AB=0.820;AC=12;AF=0.231;AN=52;BaseQRankSum=-7.715;DP=302;FS=8.501;HRun=0;HaplotypeScore=36.5451;InbreedingCoeff=0.6193;MQ=75.82;MQ0=0;MQRankSum=-0.130;QD=19.44;ReadPosRankSum=-1.432;VQSLOD=2.2763;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,6:10:13.69:287,14,0	0/0:6,0:6:15.04:0,15,174	0/0:6,0:6:3:0,3,28	0/1:9,0:10:26.14:26,0,38	0/0:15,0:15:17.35:0,17,421	0/0:19,0:20:44.97:0,45,531	0/0:6,0:6:12.04:0,12,148	0/1:18,23:41:29.47:1031,0,29	0/0:10,0:10:21.04:0,21,236	0/0:12,0:12:24.07:0,24,284	0/0:14,0:15:35.94:0,36,420	0/0:4,0:4:1.28:0,1,100	0/0:3,0:3:3.01:0,3,37	0/0:5,0:5:12.04:0,12,148	0/0:8,0:8:18.06:0,18,222	1/1:1,3:4:6.02:98,6,0	0/0:20,0:20:54.14:0,54,639	0/0:8,0:8:24.08:0,24,295	1/1:6,6:12:15.05:245,15,0	1/1:5,4:9:12.04:196,12,0	./.	./.	0/0:10,0:10:24.08:0,24,295	0/0:5,0:5:12.04:0,12,148	0/0:11,0:11:33.10:0,33,406	0/0:18,0:18:42.12:0,42,506	1/1:6,7:15:15.05:245,15,0	0/0:18,0:18:48.14:0,48,580
chr10	49842521	.	T	TTG	6522.73	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=15.311;DP=685;FS=0.347;HRun=0;HaplotypeScore=115.2674;InbreedingCoeff=0.9197;MQ=76.54;MQ0=0;MQRankSum=-3.455;QD=28.99;ReadPosRankSum=2.585;VQSLOD=6.1052;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:66.93:0,67,399	0/0:11,0:11:33.11:0,33,416	0/0:33,0:28:42.41:0,42,522	0/0:35,0:27:53.73:0,54,580	1/1:18,0:18:36.11:552,36,0	0/0:23,0:23:48.09:0,48,552	0/0:27,0:28:81.05:0,81,949	0/0:36,0:36:90.24:0,90,1081	0/0:23,0:23:63.18:0,63,770	1/1:23,0:23:43.17:891,43,0	1/1:15,0:15:21.07:332,21,0	0/0:25,0:25:69.19:0,69,843	0/0:41,0:41:99:0,111,1296	1/1:22,0:22:45.15:725,45,0	0/0:21,0:21:54.17:0,54,682	0/1:26,0:26:22.78:23,0,291	1/1:36,0:36:78.15:1147,78,0	1/1:24,0:24:60.20:955,60,0	0/0:17,0:17:36.09:0,36,430	0/0:17,0:17:39.09:0,39,456	0/0:34,0:34:90.25:0,90,1097	0/0:15,0:15:39.12:0,39,481	0/0:10,0:10:30.10:0,30,378	0/0:41,0:41:99:0,102,1248	1/1:15,5:21:36.12:589,36,0	1/1:25,0:25:38.51:868,39,0	0/0:20,0:20:48.13:0,48,579	1/1:15,0:13:26.96:442,27,0
chr10	49842533	.	G	GT	2764.25	PASS	AB=0.716;AC=16;AF=0.286;AN=56;BaseQRankSum=15.438;DP=693;FS=2.014;HRun=1;HaplotypeScore=116.4008;InbreedingCoeff=0.6168;MQ=73.34;MQ0=0;MQRankSum=-0.735;QD=12.56;ReadPosRankSum=5.961;VQSLOD=2.5383;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:80.93:0,81,366	0/0:12,0:12:36.12:0,36,500	0/0:39,0:31:80.78:0,81,927	0/0:34,0:26:68.88:0,69,817	0/1:7,11:19:5.10:258,0,5	0/0:20,0:20:60.17:0,60,790	0/0:30,0:30:87.16:0,87,1120	0/0:46,0:46:99:0,138,1812	0/0:25,0:25:72.22:0,72,963	1/1:13,12:25:22.50:432,22,0	1/1:4,7:11:4.75:146,5,0	0/0:23,0:23:69.20:0,69,929	0/0:40,0:40:99:0,120,1532	0/1:10,14:24:29.85:314,0,30	0/0:19,0:19:57.19:0,57,793	0/1:27,0:27:25.08:25,0,182	1/1:17,19:36:3.58:443,4,0	1/1:2,19:22:55.13:450,55,0	0/0:17,0:17:48.14:0,48,624	0/0:18,0:18:51.14:0,51,658	0/0:37,0:37:99:0,105,1371	0/0:15,0:15:45.13:0,45,593	0/0:11,0:11:33.11:0,33,452	0/0:39,0:39:99:0,117,1570	1/1:5,12:17:35.44:290,35,0	0/1:10,16:26:40.71:370,0,41	0/0:17,0:17:51.14:0,51,669	1/1:3,10:11:26.94:220,27,0
chr10	49842534	.	G	GT	2713.82	PASS	AB=0.631;AC=15;AF=0.268;AN=56;BaseQRankSum=16.130;DP=691;FS=3.003;HRun=0;HaplotypeScore=116.4686;InbreedingCoeff=0.6711;MQ=72.93;MQ0=0;MQRankSum=-3.232;QD=13.99;ReadPosRankSum=4.985;VQSLOD=4.7956;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:61.71:0,62,426	0/0:12,0:12:36.12:0,36,503	0/0:38,0:31:40.35:0,40,890	0/0:32,0:24:62.95:0,63,786	0/1:8,11:19:6.37:216,0,6	0/0:20,0:20:60.17:0,60,804	0/0:30,0:30:84.21:0,84,1120	0/0:46,0:46:99:0,138,1864	0/0:25,0:25:75.19:0,75,993	1/1:13,12:25:2.37:326,2,0	1/1:4,7:11:0.78:137,1,0	0/0:23,0:23:69.20:0,69,928	0/0:40,0:40:99:0,117,1526	0/1:11,14:25:1.94:380,0,2	0/0:19,0:19:57.19:0,57,797	0/0:26,0:26:68.05:0,68,337	1/1:17,19:36:4.07:473,4,0	1/1:3,19:22:60.30:490,60,0	0/0:16,0:16:48.13:0,48,636	0/0:18,0:18:51.15:0,51,678	0/0:38,0:38:99:0,108,1402	0/0:15,0:15:45.13:0,45,597	0/0:11,0:11:33.11:0,33,457	0/0:39,0:39:99:0,117,1580	1/1:5,12:17:32.95:280,33,0	0/1:10,16:26:47.61:367,0,48	0/0:17,0:17:51.13:0,51,671	1/1:3,10:11:26.93:220,27,0
chr10	49843238	.	CAAAA	C	2386.22	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=1.203;DP=837;FS=2.833;HRun=4;HaplotypeScore=171.7141;InbreedingCoeff=1.0000;MQ=89.19;MQ0=0;MQRankSum=-2.219;QD=49.71;ReadPosRankSum=1.945;VQSLOD=1.8118;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,154,4208	1/1:0,14:14:42.14:873,42,0	0/0:36,0:36:99:0,102,2820	0/0:25,0:25:75.26:0,75,2110	0/0:35,0:35:99:0,102,2847	0/0:23,0:23:69.24:0,69,1955	0/0:31,0:31:93.32:0,93,2655	0/0:40,0:40:99:0,117,3270	0/0:29,0:29:87.28:0,87,2452	0/0:32,0:32:96.30:0,96,2621	0/0:18,0:18:54.19:0,54,1538	0/0:41,0:41:99:0,123,3355	0/0:47,0:47:99:0,141,3968	0/0:31,0:31:93.31:0,93,2627	1/1:0,34:34:78.27:1635,78,0	0/0:34,0:34:99:0,102,2651	0/0:24,0:24:72.25:0,72,2040	0/0:17,0:17:51.17:0,51,1397	0/0:25,0:25:75.23:0,75,2042	0/0:26,0:26:78.27:0,78,2186	0/0:35,0:35:99:0,105,2759	0/0:26,0:26:78.25:0,78,2099	0/0:34,0:34:99:0,102,2849	0/0:19,0:19:57.20:0,57,1600	0/0:31,0:31:90.78:0,91,2474	0/0:33,0:33:99:0,99,2773	0/0:28,0:28:84.29:0,84,2366	0/0:18,0:18:54.17:0,54,1335
chr10	49844022	.	C	CCTCCAACCCTTCCCTCAA	38089.11	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=2.718;DP=687;FS=0.314;HRun=0;HaplotypeScore=315.9934;InbreedingCoeff=0.9972;MQ=82.55;MQ0=1;MQRankSum=-18.660;QD=161.39;ReadPosRankSum=1.959;VQSLOD=4.1833;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,4:25:42.10:2895,42,0	0/0:10,0:10:30.10:0,30,1351	0/0:35,0:34:82.79:0,83,2229	0/0:30,0:30:63.41:0,63,1847	1/1:18,9:28:63.17:3718,63,0	0/0:27,0:27:78.26:0,78,3666	0/0:23,0:23:66.23:0,66,2849	0/0:27,0:27:60.20:0,60,2084	0/0:20,0:20:60.21:0,60,2738	1/1:13,5:18:51.18:3722,51,0	1/1:9,15:28:75.26:5558,75,0	0/0:27,0:27:72.23:0,72,3460	0/0:22,0:22:66.21:0,66,2942	1/1:19,6:27:63.18:3919,63,0	0/0:36,0:36:99:0,105,4695	1/1:18,4:24:63.22:4030,63,0	1/1:8,1:9:24.08:1324,24,0	1/1:6,5:13:26.12:1870,26,0	0/0:21,0:21:57.16:0,57,2101	0/0:21,0:21:54.17:0,54,2577	0/0:29,0:29:84.24:0,84,3290	0/0:29,0:29:78.27:0,78,3600	0/0:24,0:24:69.22:0,69,3240	0/0:41,0:41:99:0,120,5172	1/1:20,9:32:81.28:5939,81,0	1/1:13,8:25:66.15:4158,66,0	0/0:29,0:29:87.25:0,87,3978	1/1:3,1:7:15.05:958,15,0
chr10	49844284	.	T	TC	1409.76	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=1.057;DP=623;FS=3.697;HRun=5;HaplotypeScore=78.0947;InbreedingCoeff=0.9749;MQ=77.54;MQ0=0;MQRankSum=-0.342;QD=29.37;ReadPosRankSum=-0.106;VQSLOD=3.9164;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,23:26:69.21:892,69,0	0/0:10,0:10:24:0,24,236	0/0:17,0:16:15.97:0,16,255	0/0:15,0:17:30.56:0,31,347	0/0:29,0:29:72.18:0,72,774	0/0:20,0:20:57.14:0,57,613	0/0:21,0:21:54.10:0,54,562	0/0:21,0:21:51.11:0,51,542	0/0:15,0:15:45.09:0,45,474	0/0:20,0:20:48.11:0,48,516	0/0:32,0:32:87.20:0,87,926	0/0:20,0:20:57.13:0,57,605	0/0:27,0:27:72.18:0,72,773	0/0:28,0:28:84.21:0,84,903	0/0:36,0:36:99:0,102,1096	1/1:4,18:22:21.92:638,22,0	0/0:22,0:22:66.17:0,66,709	0/0:18,0:18:54.14:0,54,580	0/0:17,0:17:42.10:0,42,451	0/0:29,0:29:78.17:0,78,822	0/0:24,0:24:72.18:0,72,774	0/0:25,0:25:66.14:0,66,699	0/0:21,0:21:57.14:0,57,612	0/0:16,0:16:48.08:0,48,503	0/0:23,0:23:66.16:0,66,702	0/0:32,0:32:96.24:0,96,1031	0/0:29,0:29:81.17:0,81,853	0/0:6,0:6:12.03:0,12,129
chr10	49845785	.	T	TA	7587.75	PASS	AB=1.000;AC=33;AF=0.589;AN=56;BaseQRankSum=-9.515;DP=668;FS=1.456;HRun=11;HaplotypeScore=74.3958;InbreedingCoeff=0.8636;MQ=74.89;MQ0=0;MQRankSum=0.215;QD=18.28;ReadPosRankSum=-2.103;VQSLOD=5.0743;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:22:47.29:0,47,409	1/1:1,11:12:1.02:190,1,0	0/0:14,0:13:1.77:0,2,63	0/1:14,0:13:12.81:13,0,33	1/1:9,20:29:50.52:475,51,0	0/0:27,0:29:70.75:0,71,540	0/0:12,0:12:29.87:0,30,230	1/1:15,29:44:78.13:778,78,0	0/0:29,3:32:18.97:0,19,518	1/1:7,19:28:62.74:583,63,0	1/1:3,18:21:25.12:417,25,0	0/0:21,0:22:58.20:0,58,431	0/0:27,0:27:53.07:0,53,535	1/1:6,14:20:33.07:335,33,0	1/1:4,24:29:59.90:582,60,0	0/0:29,1:30:52.45:0,52,576	1/1:6,12:18:16.78:344,17,0	1/1:5,16:24:26.62:374,27,0	1/1:3,17:22:36.81:491,37,0	1/1:7,26:33:54.75:695,55,0	1/1:3,15:18:18.85:373,19,0	0/0:27,0:27:61.81:0,62,461	0/0:23,0:23:44.81:0,45,348	0/0:12,0:14:33.92:0,34,244	1/1:1,17:19:44.92:441,45,0	1/1:7,25:32:52.44:693,52,0	1/1:7,28:35:22.57:556,23,0	1/1:5,12:17:25.76:248,26,0
chr10	49847570	.	A	AC	15957.03	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=-18.828;DP=758;FS=1.865;HRun=3;HaplotypeScore=64.2064;InbreedingCoeff=0.9997;MQ=68.11;MQ0=0;MQRankSum=-3.397;QD=38.36;ReadPosRankSum=1.226;VQSLOD=5.1659;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,33:36:99:1461,105,0	0/0:13,0:13:39.12:0,39,468	0/0:20,0:19:50.35:0,50,560	0/0:28,0:28:58.13:0,58,796	1/1:1,22:24:72.15:962,72,0	0/0:33,0:32:93.27:0,93,1106	0/0:16,0:16:48.14:0,48,565	1/1:2,36:38:99:1453,105,0	0/0:36,0:36:99:0,105,1247	1/1:0,28:28:84.25:1147,84,0	1/1:1,22:23:57.19:798,57,0	0/0:33,0:33:96.28:0,96,1139	0/0:39,0:39:99:0,117,1342	1/1:1,21:22:60.20:840,60,0	0/0:38,0:38:99:0,99,1167	1/1:1,27:28:75.25:1050,75,0	1/1:0,19:19:54.18:756,54,0	1/1:0,10:10:24.04:313,24,0	1/1:1,25:27:78.13:992,78,0	1/1:1,40:41:99:1653,120,0	1/1:0,28:28:78.26:1092,78,0	0/0:31,0:31:90.24:0,90,1055	0/0:35,0:35:99:0,102,1209	0/0:19,0:19:57.17:0,57,684	1/1:1,25:26:69.23:966,69,0	1/1:0,22:22:66.22:922,66,0	1/1:1,27:28:75.25:1050,75,0	1/1:0,16:16:36.12:504,36,0
chr10	49848792	.	ATG	A	260.54	PASS	AB=1.000;AC=19;AF=0.500;AN=38;BaseQRankSum=4.675;DP=80;FS=8.926;HRun=0;HaplotypeScore=17.9761;InbreedingCoeff=0.5400;MQ=48.81;MQ0=3;MQRankSum=-0.531;QD=7.24;ReadPosRankSum=-1.049;VQSLOD=0.5874;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	./.	0/0:2,0:2:6.02:0,6,100	0/0:3,0:3:9.03:0,9,172	1/1:5,0:5:2.18:26,2,0	0/0:4,0:4:12.04:0,12,229	1/1:1,0:1:2.97:20,3,0	1/1:3,0:3:3:26,3,0	0/0:3,0:2:6.02:0,6,115	0/0:6,0:6:18.05:0,18,297	1/1:2,0:2:3:25,3,0	0/0:2,0:2:5.94:0,6,43	1/1:0,3:3:3.01:45,3,0	1/1:10,0:10:14.93:125,15,0	./.	./.	1/1:6,0:6:9.46:76,9,0	0/1:1,0:1:0:0,0,0	0/0:3,0:3:3.01:0,3,42	0/0:1,0:1:3.01:0,3,43	0/0:6,0:6:15.04:0,15,254	./.	1/1:3,0:3:2.49:26,2,0	1/1:2,0:2:3:25,3,0	./.
chr10	49851834	.	G	GAAGAC	15141.69	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-10.644;DP=766;FS=1.391;HRun=0;HaplotypeScore=168.0960;InbreedingCoeff=0.9867;MQ=79.95;MQ0=0;MQRankSum=-14.114;QD=73.50;ReadPosRankSum=-1.028;VQSLOD=5.7705;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,31:36:87.30:2549,87,0	0/0:11,0:11:30.10:0,30,615	0/0:26,0:26:63.21:0,63,1238	0/0:25,0:24:57.11:0,57,1085	0/0:24,0:24:69.24:0,69,1408	0/0:25,0:25:69.21:0,69,1372	0/0:27,0:27:78.27:0,78,1637	1/1:14,19:34:81.28:2312,81,0	0/0:33,0:33:96.31:0,96,1943	0/0:27,0:27:81.27:0,81,1668	0/0:22,0:22:63.22:0,63,1287	0/0:34,0:34:99:0,99,1999	0/0:41,0:41:99:0,114,2340	0/0:29,0:29:75.26:0,75,1561	0/0:38,0:38:99:0,111,2244	1/1:6,21:27:15.33:2128,15,0	0/0:27,0:27:78.23:0,78,1560	0/0:36,0:36:99:0,103,2123	1/1:11,14:25:72.20:2062,72,0	1/1:6,14:22:54.18:1513,54,0	1/1:4,22:27:60.21:1762,60,0	0/0:30,0:30:87.26:0,87,1747	0/0:20,0:20:60.21:0,60,1236	0/0:31,0:31:90.29:0,90,1835	0/0:21,0:21:51.17:0,51,1065	0/0:25,0:25:60.21:0,60,1244	1/1:5,30:35:93.32:2817,93,0	0/0:8,0:8:9.03:0,9,189
chr10	49851844	.	TG	T	8642.36	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=2.353;DP=750;FS=0.606;HRun=1;HaplotypeScore=120.6397;InbreedingCoeff=0.9975;MQ=78.06;MQ0=0;MQRankSum=3.113;QD=38.58;ReadPosRankSum=3.266;VQSLOD=4.5706;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:96.30:0,96,1455	0/0:11,0:11:33.11:0,33,516	0/0:22,0:22:63.17:0,63,878	0/0:22,0:22:53.34:0,53,794	1/1:0,28:28:78.23:1069,78,0	0/0:26,0:26:78.27:0,78,1219	0/0:30,0:30:90.27:0,90,1347	0/0:23,0:23:69.06:0,69,962	0/0:28,0:28:84.26:0,84,1287	1/1:0,32:32:96.27:1272,96,0	1/1:0,24:24:72.17:981,72,0	0/0:37,0:37:99:0,108,1662	0/0:39,0:39:99:0,117,1760	1/1:0,29:29:72.24:1000,72,0	0/0:37,0:37:99:0,111,1713	0/0:28,0:28:61.04:0,61,1196	1/1:0,31:31:84.28:1174,84,0	1/1:0,34:34:99:1384,99,0	0/0:26,0:26:78.25:0,78,1177	0/0:21,0:21:60.20:0,60,933	0/0:26,0:26:63.21:0,63,959	0/0:28,0:28:81.06:0,81,1229	0/0:22,0:22:63.09:0,63,928	0/0:32,0:32:96.27:0,96,1451	1/1:0,18:18:48.16:671,48,0	1/1:0,22:22:63.21:881,63,0	0/0:32,0:32:96.31:0,96,1453	1/1:0,6:6:15.05:210,15,0
chr10	49852706	.	G	GC	6921.93	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-15.344;DP=666;FS=4.961;HRun=4;HaplotypeScore=60.8997;InbreedingCoeff=0.9983;MQ=89.26;MQ0=0;MQRankSum=-2.367;QD=36.24;ReadPosRankSum=-0.270;VQSLOD=5.1134;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,22:25:57.19:780,57,0	0/0:6,0:6:18.05:0,18,204	0/0:32,0:32:80.90:0,81,892	0/0:23,0:23:57.68:0,58,587	0/0:18,0:18:42.12:0,42,477	0/0:24,0:24:69.20:0,69,783	0/0:17,0:17:51.13:0,51,567	1/1:2,31:33:93.30:1256,93,0	0/0:21,0:21:54.15:0,54,613	0/0:23,0:23:63.16:0,63,701	0/0:24,0:23:66.19:0,66,748	0/0:28,0:28:75.21:0,75,850	0/0:31,0:31:81.21:0,81,906	0/0:21,0:21:60.15:0,60,670	0/0:33,0:33:93.25:0,93,1044	1/1:3,20:23:26.16:746,26,0	0/0:22,0:22:63.15:0,63,702	0/0:20,0:20:51.10:0,51,564	1/1:3,16:19:51.13:660,51,0	1/1:0,29:29:87.29:1185,87,0	1/1:0,23:23:69.23:944,69,0	0/0:24,0:24:72.19:0,72,807	0/0:19,0:19:51.12:0,51,566	0/0:18,0:18:51.14:0,51,579	0/0:24,0:24:69.20:0,69,783	0/0:31,0:31:87.25:0,87,987	1/1:2,37:39:99:1351,99,0	0/0:16,0:16:48.12:0,48,534
chr10	49854248	.	T	TGAGTGTGG	5412.41	PASS	AB=0.870;AC=9;AF=0.161;AN=56;BaseQRankSum=8.737;DP=691;FS=23.776;HRun=0;HaplotypeScore=196.2395;InbreedingCoeff=0.3480;MQ=84.07;MQ0=0;MQRankSum=-10.396;QD=33.41;ReadPosRankSum=-6.747;VQSLOD=2.2265;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:19,0:19:12.88:162,0,13	0/0:16,0:16:45.15:0,45,1143	0/0:23,0:23:45.15:0,45,1136	0/0:23,0:23:57.07:0,57,1239	0/0:22,0:22:51.12:0,51,1112	0/0:17,0:17:48.15:0,48,1237	0/0:25,0:25:69.18:0,69,1699	0/1:22,3:25:99:1256,0,142	0/0:27,0:27:81.27:0,81,2101	0/0:20,0:20:54.19:0,54,1456	0/0:19,0:19:54.18:0,54,1373	0/0:28,0:28:72.25:0,72,1825	0/0:31,0:31:81.24:0,81,2047	0/0:40,0:40:99:0,102,2642	0/0:42,0:42:99:0,120,3080	0/1:11,4:15:1.97:337,0,2	0/0:32,0:32:93.32:0,93,2348	0/0:40,0:40:99:0,105,2771	0/1:10,2:14:86.53:481,0,87	1/1:13,5:19:2.21:757,2,0	0/1:21,2:24:29.90:135,0,30	0/0:19,0:19:48.14:0,48,1168	0/0:18,0:18:45.15:0,45,1214	0/0:36,0:36:99:0,102,2706	0/0:24,0:24:60.21:0,60,1619	0/0:16,0:16:48.15:0,48,1183	1/1:38,7:46:19.62:2285,20,0	0/0:11,0:11:33.11:0,33,891
chr10	49854933	.	GTTT	G	5544.61	PASS	AB=0.542;AC=19;AF=0.339;AN=56;BaseQRankSum=11.959;DP=711;FS=3.568;HRun=13;HaplotypeScore=119.4483;InbreedingCoeff=0.9321;MQ=64.85;MQ0=0;MQRankSum=-1.068;QD=21.92;ReadPosRankSum=6.199;VQSLOD=3.5722;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:50:99:0,126,2187	0/0:4,0:14:12.95:0,13,44	0/0:21,0:19:41.70:0,42,575	0/0:8,0:8:20.52:0,21,236	1/1:5,17:22:28.36:358,28,0	0/0:22,0:25:69.24:0,69,1277	0/0:22,0:22:54.18:0,54,998	0/0:33,0:34:57.15:0,57,979	0/0:21,0:25:64.40:0,64,1064	1/1:4,19:24:57.04:671,57,0	1/1:4,12:16:27:328,27,0	0/0:26,0:28:69.24:0,69,1263	0/0:22,0:23:61.45:0,61,1129	1/1:9,28:39:76.43:917,76,0	0/1:4,1:26:4.35:4,0,48	0/0:32,0:33:72.24:0,72,1312	1/1:7,33:40:78.18:949,78,0	1/1:4,13:17:12.38:344,12,0	0/0:20,0:22:51.15:0,51,888	0/0:21,0:22:45.13:0,45,796	0/0:12,0:17:39.09:0,39,615	0/0:27,0:29:81.27:0,81,1493	0/0:22,0:24:51.16:0,51,932	0/0:24,0:27:70.46:0,70,1269	1/1:2,23:26:57.11:679,57,0	1/1:5,23:28:66.11:802,66,0	0/0:32,0:34:82.50:0,82,1393	1/1:1,13:15:42.06:492,42,0
chr10	49857201	.	AT	A	900.39	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.394;DP=533;FS=0.000;HRun=5;HaplotypeScore=50.4876;InbreedingCoeff=0.9915;MQ=78.86;MQ0=0;MQRankSum=-1.993;QD=27.28;ReadPosRankSum=0.126;VQSLOD=3.0296;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:43.25:0,43,611	1/1:0,8:8:21.06:238,21,0	0/0:16,0:16:44.74:0,45,578	0/0:12,0:12:27.09:0,27,366	0/0:24,0:24:69.22:0,69,928	0/0:21,0:21:60.19:0,60,804	0/0:9,0:9:24.08:0,24,328	0/0:40,0:40:99:0,114,1558	0/0:16,0:16:48.16:0,48,657	0/0:22,0:22:66.22:0,66,903	0/0:16,0:16:45.15:0,45,616	0/0:6,0:6:18.06:0,18,246	0/0:13,0:13:36.12:0,36,493	0/0:16,0:16:48.12:0,48,608	1/1:1,24:25:69.20:783,69,0	0/0:19,0:19:57.19:0,57,780	0/0:16,0:16:30.10:0,30,410	0/0:20,0:20:57.17:0,57,760	0/0:22,0:22:60.19:0,60,806	0/0:38,0:38:99:0,105,1419	0/0:12,0:12:36.11:0,36,476	0/0:17,0:17:45.15:0,45,616	0/0:24,0:24:63.20:0,63,846	0/0:11,0:11:33.11:0,33,451	0/0:19,0:19:54.18:0,54,738	0/0:29,0:29:84.28:0,84,1149	0/0:30,0:30:90.30:0,90,1231	0/0:15,0:15:33.11:0,33,451
chr10	49858513	.	AAAAC	A	2504.99	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=10.403;DP=772;FS=4.905;HRun=0;HaplotypeScore=125.1575;InbreedingCoeff=0.9897;MQ=73.79;MQ0=2;MQRankSum=-1.474;QD=25.82;ReadPosRankSum=-1.514;VQSLOD=3.0166;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,129,3041	0/0:13,0:13:24.08:0,24,565	0/0:28,0:25:12.04:0,12,272	0/0:39,0:36:47.80:0,48,1034	0/0:27,0:27:57.17:0,57,1239	0/0:23,0:23:54.19:0,54,1308	0/0:33,0:33:69.24:0,69,1685	1/1:15,11:25:33.08:492,33,0	0/0:26,0:26:66.23:0,66,1585	0/0:32,0:32:75.26:0,75,1774	0/0:21,0:21:39.13:0,39,867	0/0:33,0:33:63.20:0,63,1463	0/0:40,0:39:93.31:0,93,2217	0/0:17,0:17:39.13:0,39,915	0/0:40,0:40:93.31:0,93,2202	0/0:35,0:35:90.29:0,90,2078	0/0:30,0:30:66.21:0,66,1565	0/0:23,0:23:45.15:0,45,1100	1/1:1,6:7:18.05:265,18,0	1/1:8,8:15:24.08:394,24,0	1/1:5,27:32:60.20:986,60,0	0/0:26,0:26:51.18:0,51,1221	0/0:22,0:22:45.15:0,45,1017	0/0:42,1:43:56.04:0,56,2407	0/0:33,0:33:72.25:0,72,1735	0/0:28,0:28:66.09:0,66,1522	1/1:3,13:16:33.11:543,33,0	0/0:9,0:9:27.09:0,27,660
chr10	49860264	.	TG	T	3190.88	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=13.028;DP=773;FS=1.248;HRun=6;HaplotypeScore=87.8532;InbreedingCoeff=0.9997;MQ=85.36;MQ0=0;MQRankSum=-1.326;QD=24.74;ReadPosRankSum=-1.306;VQSLOD=2.9094;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,105,1365	0/0:13,0:13:39.12:0,39,500	0/0:28,0:28:26.81:0,27,638	0/0:30,0:30:69.78:0,70,827	0/0:37,0:37:99:0,102,1321	0/0:32,0:32:84.26:0,84,1090	0/0:20,0:20:57.19:0,57,749	1/1:4,26:30:69.15:733,69,0	0/0:21,0:21:60.19:0,60,777	0/0:33,0:33:81.26:0,81,1065	0/0:23,0:23:54.18:0,54,710	0/0:31,0:31:84.18:0,84,1025	0/0:41,0:41:99:0,117,1518	0/0:31,0:31:84.26:0,84,1090	0/0:31,0:31:90.27:0,90,1155	0/0:23,0:23:66.19:0,66,840	0/0:33,0:33:93.29:0,93,1208	0/0:13,0:13:39.13:0,39,512	1/1:3,14:17:39.09:417,39,0	1/1:6,24:30:66.16:709,66,0	1/1:1,17:18:51.13:548,51,0	0/0:33,0:33:84.27:0,84,1101	0/0:25,0:25:63.20:0,63,816	0/0:29,0:29:87.28:0,87,1143	0/0:31,0:31:93.30:0,93,1213	0/0:30,0:30:78.25:0,78,1011	1/1:1,33:34:90.21:958,90,0	0/0:17,0:17:39.12:0,39,499
chr10	49860845	.	TACAC	T	352.94	PASS	AB=0.993;AC=20;AF=0.455;AN=44;BaseQRankSum=1.688;DP=469;FS=11.314;HRun=0;HaplotypeScore=79.7463;InbreedingCoeff=0.1808;MQ=57.01;MQ0=14;MQRankSum=0.411;QD=1.70;ReadPosRankSum=2.767;VQSLOD=0.4071;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:28:0:0,0,0	0/1:6,0:6:6.53:13,0,7	./.	./.	1/1:8,0:10:0.89:2,1,0	0/0:16,0:16:21.01:0,21,259	1/1:17,6:22:5.97:91,6,0	./.	./.	0/0:14,0:14:2.99:0,3,23	0/0:13,2:15:2.98:0,3,22	0/1:17,0:17:13.74:14,0,19	0/0:13,0:12:12.04:0,12,235	1/1:16,4:20:1.07:67,1,0	0/0:18,0:18:11.17:0,11,53	1/1:7,0:18:6.01:56,6,0	0/1:24,0:23:8.39:27,0,8	0/1:23,1:22:5.12:96,0,5	1/1:11,0:13:3:28,3,0	1/1:11,0:18:2.96:19,3,0	./.	0/0:8,0:8:3.01:0,3,65	0/1:10,0:8:10.97:11,0,64	0/0:19,0:21:6.52:0,7,258	1/1:16,0:16:5.46:29,5,0	0/0:12,0:12:4.95:0,5,26	./.	0/1:7,0:7:4.13:33,0,4
chr10	49862159	.	AAC	A	544.77	PASS	AB=0.878;AC=19;AF=0.413;AN=46;BaseQRankSum=-1.406;DP=543;FS=0.880;HRun=0;HaplotypeScore=80.6467;InbreedingCoeff=0.5226;MQ=54.72;MQ0=14;MQRankSum=0.718;QD=2.42;ReadPosRankSum=2.247;VQSLOD=1.7738;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:26:1.17:1,0,185	0/0:8,0:8:0.47:0,0,1	./.	./.	0/0:23,0:23:17.98:0,18,157	1/1:26,8:34:9.49:95,9,0	1/1:16,1:20:11.69:92,12,0	./.	1/1:14,4:19:11.86:110,12,0	0/0:12,0:12:3.47:0,3,27	0/0:13,0:13:12.01:0,12,115	1/1:18,1:20:8.75:78,9,0	1/1:22,5:26:6.01:64,6,0	0/0:21,0:23:5.99:0,6,49	0/0:18,0:21:9.01:0,9,88	0/0:32,0:32:21.61:0,22,182	0/0:23,0:22:20.90:0,21,181	0/0:13,0:11:8.86:0,9,61	./.	1/1:16,0:19:2.84:14,3,0	./.	0/1:15,0:16:6.27:18,0,6	1/1:9,1:11:5.85:46,6,0	0/1:13,7:19:23.08:171,0,23	0/0:18,0:17:8.99:0,9,78	0/0:17,0:17:9.40:0,9,107	1/1:10,0:9:2.84:14,3,0	0/0:9,0:9:6.01:0,6,68
chr10	49863464	.	A	AGG	374.02	PASS	AC=8;AF=0.148;AN=54;BaseQRankSum=5.063;DP=408;FS=6.003;HRun=3;HaplotypeScore=80.0990;InbreedingCoeff=0.7369;MQ=55.99;MQ0=10;MQRankSum=-1.825;QD=7.06;ReadPosRankSum=-1.509;VQSLOD=-0.4429;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:50.39:0,50,632	0/0:5,0:5:7.77:0,8,74	0/0:14,0:8:23.99:0,24,241	0/0:20,0:9:22.83:0,23,239	0/0:14,0:13:32.96:0,33,405	0/0:17,0:17:15.50:0,15,388	0/0:17,0:16:44.61:0,45,472	1/1:21,0:18:3.90:120,4,0	0/0:15,0:14:41.99:0,42,543	0/0:18,0:18:32.25:0,32,485	0/0:17,0:17:16.76:0,17,308	0/0:15,0:15:44.94:0,45,543	0/0:16,0:15:39.05:0,39,492	0/0:13,0:13:16.02:0,16,270	0/0:7,0:7:1.39:0,1,44	0/0:7,0:7:10.40:0,10,138	0/0:12,0:11:26.99:0,27,326	0/0:11,0:10:24.58:0,25,239	1/1:5,0:5:5.74:43,6,0	1/1:19,0:19:25.29:218,25,0	./.	0/0:11,0:11:2.95:0,3,147	0/0:17,0:17:44.78:0,45,576	0/0:18,0:18:5.13:0,5,518	0/0:22,0:22:39.23:0,39,393	0/0:20,0:20:56.74:0,57,566	1/1:8,0:8:15.24:133,15,0	0/0:4,0:3:8.88:0,9,78
chr10	49863481	.	AAGAGAG	A	130.92	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=2.860;DP=379;FS=0.000;HRun=0;HaplotypeScore=93.2040;InbreedingCoeff=0.3531;MQ=52.40;MQ0=10;MQRankSum=-2.093;QD=6.23;ReadPosRankSum=-2.135;VQSLOD=1.6316;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:18,12:30:1.84:0,2,16	1/1:5,0:5:0.47:1,0,0	0/0:3,0:2:2.99:0,3,23	0/0:15,0:6:0.47:0,0,1	0/0:11,0:10:0:0,0,0	0/0:21,0:21:29.47:0,29,519	0/0:12,0:14:11.86:0,12,263	0/0:18,0:13:13.89:0,14,79	0/0:15,0:14:27.06:0,27,482	0/0:15,0:15:30.10:0,30,626	0/0:18,0:18:10.91:0,11,158	0/0:15,0:15:11.01:0,11,331	0/0:21,0:21:25.81:0,26,367	0/0:10,0:11:6.02:0,6,163	0/1:9,0:9:44.57:45,0,57	1/1:1,6:7:8.60:180,9,0	0/0:12,0:11:12.04:0,12,271	0/0:9,0:8:9.01:0,9,102	0/0:4,0:4:5.09:0,5,24	0/0:14,0:14:3.01:0,3,31	0/0:15,0:12:0:0,0,0	0/0:11,0:12:16.73:0,17,401	0/0:15,0:17:16.41:0,16,370	0/0:17,0:17:21.05:0,21,521	0/0:22,0:22:13.99:0,14,243	0/0:16,0:16:29.41:0,29,529	0/0:8,0:8:4.26:0,4,48	0/0:3,0:2:3.01:0,3,37
chr10	49863963	.	TTTTG	T	1567.13	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=9.599;DP=572;FS=41.424;HRun=0;HaplotypeScore=98.5324;InbreedingCoeff=0.9762;MQ=64.30;MQ0=3;MQRankSum=-4.520;QD=24.49;ReadPosRankSum=-2.626;VQSLOD=1.0577;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:23:54.18:0,54,1253	0/0:11,0:11:33.11:0,33,753	0/0:31,0:20:35.24:0,35,693	0/0:39,0:28:19.66:0,20,626	0/0:19,0:19:54.18:0,54,1218	0/0:22,0:22:57.19:0,57,1239	0/0:21,0:21:51.17:0,51,1192	1/1:4,15:19:42.08:649,42,0	0/0:21,0:21:63.21:0,63,1480	0/0:27,0:27:75.25:0,75,1740	0/0:19,0:19:51.17:0,51,1230	0/0:23,0:23:60.20:0,60,1385	0/0:22,0:22:60.20:0,60,1476	0/0:20,0:20:48.16:0,48,979	0/0:18,0:18:48.16:0,48,1160	0/0:19,0:19:54.18:0,54,1325	0/0:37,0:37:96.33:0,96,2274	0/0:25,0:25:57.19:0,57,1339	1/1:2,5:7:15.05:236,15,0	1/1:4,10:14:27.09:465,27,0	1/1:4,10:14:15.05:231,15,0	0/0:21,0:21:54.18:0,54,1151	0/0:13,0:13:39.12:0,39,895	0/0:22,0:22:51.17:0,51,1156	0/0:18,0:17:42.14:0,42,933	0/0:29,0:29:87.28:0,87,1803	1/1:3,7:10:9.03:156,9,0	0/0:7,0:7:21.07:0,21,490
chr10	49866234	.	A	AT	4592.97	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-11.990;DP=685;FS=1.730;HRun=2;HaplotypeScore=61.3448;InbreedingCoeff=0.9999;MQ=81.72;MQ0=0;MQRankSum=0.306;QD=39.59;ReadPosRankSum=-2.454;VQSLOD=4.4446;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:84.26:0,84,1040	0/0:12,0:12:36.11:0,36,446	0/0:18,0:18:41.88:0,42,572	0/0:17,0:17:51.13:0,51,590	0/0:39,0:39:99:0,114,1413	0/0:29,0:29:87.26:0,87,1066	0/0:21,0:21:63.18:0,63,768	1/1:3,27:30:84.27:1179,84,0	0/0:27,0:27:81.24:0,81,990	0/0:29,0:29:81.25:0,81,995	0/0:23,0:23:69.19:0,69,831	0/0:23,0:23:69.22:0,69,855	0/0:31,0:31:93.23:0,93,1101	0/0:24,0:24:69.20:0,69,841	0/0:34,0:34:96.30:0,96,1190	0/0:21,0:21:63.20:0,63,781	0/0:18,0:18:48.12:0,48,580	0/0:20,0:20:60.15:0,60,723	1/1:0,23:23:69.20:955,69,0	1/1:0,24:24:72.16:990,72,0	1/1:2,17:19:48.16:691,48,0	0/0:25,0:25:72.21:0,72,879	0/0:20,0:20:60.16:0,60,718	0/0:19,0:19:54.17:0,54,669	0/0:42,0:42:99:0,123,1489	0/0:34,0:34:96.29:0,96,1179	1/1:0,20:20:54.07:777,54,0	0/0:14,0:14:42.07:0,42,490
chr10	49869521	.	G	GTACT	8872.09	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-7.753;DP=710;FS=8.204;HRun=0;HaplotypeScore=116.3443;InbreedingCoeff=0.9925;MQ=86.27;MQ0=0;MQRankSum=-7.100;QD=61.61;ReadPosRankSum=-0.723;VQSLOD=6.6378;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,132,2385	0/0:16,0:16:42.14:0,42,784	0/0:22,0:23:30.38:0,30,855	0/0:26,0:26:72.17:0,72,1234	0/0:11,0:11:27.09:0,27,501	0/0:20,0:20:57.20:0,57,1063	0/0:35,0:35:99:0,99,1776	1/1:10,25:36:96.27:2341,96,0	0/0:25,0:25:69.24:0,69,1277	0/0:25,0:25:72.25:0,72,1335	0/0:22,0:22:60.19:0,60,1089	0/0:24,0:24:66.23:0,66,1225	0/0:33,0:33:96.33:0,96,1782	0/0:22,0:22:66.18:0,66,1137	0/0:27,0:27:78.27:0,78,1439	0/0:25,0:25:72.25:0,72,1337	0/0:41,0:41:99:0,123,2159	0/0:22,0:22:63.22:0,63,1171	1/1:4,17:22:60.21:1564,60,0	1/1:2,17:22:48.16:1271,48,0	1/1:8,32:43:90.27:2340,90,0	0/0:18,0:18:48.16:0,48,895	0/0:23,0:23:66.23:0,66,1231	0/0:33,0:33:96:0,96,1745	0/0:17,0:17:48.16:0,48,894	0/0:26,0:26:75.26:0,75,1400	1/1:2,17:21:51.18:1356,51,0	0/0:4,0:4:12.04:0,12,224
chr10	49870514	.	CCA	C	2791.67	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=11.567;DP=487;FS=3.659;HRun=0;HaplotypeScore=70.0919;InbreedingCoeff=0.9869;MQ=85.19;MQ0=3;MQRankSum=-7.909;QD=31.02;ReadPosRankSum=-0.845;VQSLOD=4.6446;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:93.32:0,93,1857	0/0:4,0:4:12.04:0,12,227	0/0:13,0:13:39.13:0,39,756	0/0:20,0:20:57.13:0,57,963	0/0:16,0:16:48.15:0,48,938	0/0:24,0:24:72.23:0,72,1427	0/0:10,0:10:30.10:0,30,595	1/1:1,17:18:54.18:815,54,0	0/0:17,0:17:51.17:0,51,1021	0/0:15,0:15:45.15:0,45,881	0/0:11,0:11:33.11:0,33,655	0/0:18,0:18:54.13:0,54,992	0/0:12,0:12:33.11:0,33,671	0/0:18,0:18:51.16:0,51,984	0/0:20,0:20:60.21:0,60,1219	0/0:14,0:14:42.14:0,42,854	0/0:25,0:24:69.24:0,69,1375	0/0:19,0:19:57.15:0,57,1078	1/1:2,10:11:32.32:475,32,0	1/1:6,9:14:33.10:491,33,0	1/1:12,8:19:18:293,18,0	0/0:16,0:16:48.16:0,48,976	0/0:16,0:16:48.15:0,48,939	0/0:23,0:23:66.23:0,66,1329	0/0:20,0:19:60.21:0,60,1195	0/0:29,0:29:87.30:0,87,1721	1/1:11,14:25:66.07:893,66,0	0/0:5,0:5:15.05:0,15,304
chr10	49870520	.	A	ACC	2354.53	PASS	AC=10;AF=0.185;AN=54;BaseQRankSum=10.515;DP=493;FS=2.364;HRun=7;HaplotypeScore=77.0043;InbreedingCoeff=0.9642;MQ=83.29;MQ0=3;MQRankSum=-7.650;QD=23.55;ReadPosRankSum=-1.979;VQSLOD=2.4176;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:73.09:0,73,839	0/0:4,0:4:12.04:0,12,140	0/0:15,0:15:38.92:0,39,433	0/0:15,0:16:7.17:0,7,334	0/0:15,0:15:42.11:0,42,479	0/0:23,0:23:57.16:0,57,664	0/0:9,0:9:21.05:0,21,245	1/1:7,14:22:47.65:685,48,0	0/0:19,0:19:48.13:0,48,559	0/0:14,0:14:36.09:0,36,412	0/0:12,0:12:33.07:0,33,374	0/0:16,0:16:45.61:0,46,525	0/0:12,0:12:27.08:0,27,315	0/0:16,0:16:45.13:0,45,524	0/0:19,0:19:54.15:0,54,629	0/0:19,0:19:54.11:0,54,597	0/0:27,0:26:69.15:0,69,788	0/0:17,0:17:42.11:0,42,489	1/1:9,6:14:23.57:333,24,0	1/1:14,3:16:33.07:467,33,0	1/1:16,3:18:12:168,12,0	0/0:19,0:19:51.12:0,51,573	0/0:14,0:14:39.11:0,39,454	0/0:22,0:22:57.17:0,57,664	0/0:20,0:19:54.14:0,54,620	0/0:31,0:31:90.25:0,90,1039	1/1:18,9:27:66.05:873,66,0	./.
chr10	49870704	.	G	GT	5906.46	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=12.523;DP=642;FS=4.345;HRun=2;HaplotypeScore=68.3221;InbreedingCoeff=0.9997;MQ=90.60;MQ0=0;MQRankSum=-3.145;QD=43.43;ReadPosRankSum=-0.736;VQSLOD=4.1734;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:81.27:0,81,1132	0/0:12,0:12:33.11:0,33,461	0/0:28,0:28:81.27:0,81,1121	0/0:23,0:23:66.20:0,66,902	0/0:34,0:34:99:0,99,1363	0/0:25,0:25:72.23:0,72,985	0/0:18,0:18:54.17:0,54,738	1/1:0,30:30:87.27:1337,87,0	0/0:18,0:18:54.18:0,54,755	0/0:23,0:23:69.22:0,69,951	0/0:17,0:17:51.15:0,51,695	0/0:22,0:22:66.22:0,66,923	0/0:17,0:17:51.17:0,51,713	0/0:23,0:23:69.22:0,69,948	0/0:31,0:31:93.30:0,93,1283	0/0:22,0:22:63.20:0,63,864	0/0:23,0:23:66.22:0,66,921	0/0:13,0:13:39.13:0,39,539	1/1:1,22:23:66.23:1052,66,0	1/1:0,24:24:72.25:1151,72,0	1/1:1,28:29:50.48:1219,50,0	0/0:22,0:22:60.19:0,60,820	0/0:25,0:25:75.25:0,75,1048	0/0:21,0:21:60.20:0,60,837	0/0:20,0:20:57.19:0,57,797	0/0:32,0:32:96.32:0,96,1343	1/1:1,29:30:72.24:1147,72,0	0/0:9,0:9:27.09:0,27,377
chr10	49871629	.	CAAAACA	C	4554.76	PASS	AB=0.943;AC=11;AF=0.196;AN=56;BaseQRankSum=12.730;DP=657;FS=0.000;HRun=0;HaplotypeScore=143.4014;InbreedingCoeff=0.8829;MQ=63.97;MQ0=8;MQRankSum=-13.101;QD=34.25;ReadPosRankSum=-2.477;VQSLOD=4.0751;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:31:93.31:0,93,2666	0/0:15,0:15:42.14:0,42,1293	0/0:30,0:17:38.68:0,39,665	0/1:30,0:14:19.59:20,0,302	0/0:28,0:28:78.25:0,78,2440	0/0:15,0:15:45.14:0,45,1219	0/0:17,0:17:49.32:0,49,1348	1/1:22,7:29:62.42:888,62,0	0/0:17,0:17:51.17:0,51,1573	0/0:31,0:31:90.30:0,90,2609	0/0:35,0:34:93.26:0,93,2760	0/0:25,0:25:66.22:0,66,2126	0/0:22,0:22:66.21:0,66,2097	0/0:17,0:17:51.17:0,51,1540	0/0:25,0:25:75.24:0,75,1992	0/0:20,0:20:57.19:0,57,1635	0/0:35,0:35:99:0,99,2933	0/0:22,0:22:63.21:0,63,1956	1/1:9,4:13:33.09:530,33,0	1/1:4,22:26:72.10:1588,72,0	1/1:5,2:7:13.67:228,14,0	0/0:19,0:19:54.15:0,54,1507	0/0:22,0:22:66.23:0,66,2032	0/0:21,0:21:57.67:0,58,1922	0/0:25,0:25:72.23:0,72,2211	0/0:32,0:32:90.28:0,90,2676	1/1:8,17:25:63.19:1302,63,0	0/0:20,0:20:57.19:0,57,1580
chr10	49871634	.	CA	C	1431.79	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=13.623;DP=649;FS=0.000;HRun=7;HaplotypeScore=91.6910;InbreedingCoeff=0.9937;MQ=66.58;MQ0=7;MQRankSum=-13.423;QD=15.73;ReadPosRankSum=-1.841;VQSLOD=3.2141;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:86.64:0,87,1058	0/0:14,0:14:42.13:0,42,528	0/0:29,0:17:38.68:0,39,427	0/0:32,0:15:17.73:0,18,183	0/0:26,0:26:72.23:0,72,905	0/0:16,0:16:45.13:0,45,555	0/0:17,0:17:39.12:0,39,488	1/1:11,15:26:65.18:573,65,0	0/0:17,0:17:51.16:0,51,641	0/0:33,0:33:90.29:0,90,1131	0/0:32,0:32:78.25:0,78,980	0/0:25,0:25:72.22:0,72,891	0/0:24,0:24:69.18:0,69,823	0/0:18,0:18:54.16:0,54,667	0/0:27,0:27:66.20:0,66,817	0/0:19,0:19:57.18:0,57,717	0/0:33,0:33:96.31:0,96,1207	0/0:23,0:23:57.18:0,57,715	1/1:5,6:11:32.21:255,32,0	1/1:24,3:27:53.25:347,53,0	1/1:2,5:7:14.56:117,15,0	0/0:18,0:18:51.16:0,51,638	0/0:23,0:23:63.20:0,63,792	0/0:21,0:21:57.65:0,58,718	0/0:27,0:27:69.22:0,69,867	0/0:31,0:31:90.29:0,90,1131	1/1:17,3:19:56.58:314,57,0	0/0:19,0:19:57.18:0,57,717
chr10	49871646	.	CA	C	2332.77	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=13.629;DP=655;FS=3.792;HRun=8;HaplotypeScore=96.7486;InbreedingCoeff=0.9527;MQ=70.77;MQ0=4;MQRankSum=-10.326;QD=21.60;ReadPosRankSum=-2.494;VQSLOD=2.6598;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,102,1174	0/0:17,0:17:45.14:0,45,542	0/0:25,0:18:20.76:0,21,340	0/0:19,1:14:2.06:0,2,171	0/0:28,1:29:46.25:0,46,840	0/0:18,0:18:51.14:0,51,603	0/0:17,0:17:42.13:0,42,507	1/1:4,24:28:69.11:666,69,0	0/0:18,0:18:51.16:0,51,615	0/0:36,0:36:99:0,99,1188	0/0:27,0:27:72.22:0,72,870	0/0:27,0:27:69.21:0,69,831	0/0:21,0:21:57.17:0,57,678	0/0:18,0:18:51.15:0,51,607	0/0:23,0:23:66.19:0,66,786	0/0:24,0:24:63.19:0,63,750	0/0:33,0:33:81.25:0,81,979	0/0:19,0:19:54.17:0,54,652	1/1:4,12:16:36:338,36,0	1/1:4,25:29:68.38:664,68,0	1/1:3,7:10:21.03:202,21,0	0/0:20,0:20:57.17:0,57,678	0/0:19,0:19:45.14:0,45,538	0/0:22,0:22:54.15:0,54,641	0/0:24,0:24:66.20:0,66,797	0/0:35,0:35:90.28:0,90,1087	1/1:2,23:25:66.11:637,66,0	0/0:19,0:19:57.15:0,57,665
chr10	49873684	.	C	CA	1417.44	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-7.850;DP=587;FS=0.000;HRun=5;HaplotypeScore=55.1399;InbreedingCoeff=0.9982;MQ=85.60;MQ0=0;MQRankSum=-4.044;QD=31.50;ReadPosRankSum=-0.522;VQSLOD=3.7775;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,28:28:78.25:1026,78,0	0/0:9,0:9:24.06:0,24,258	0/0:20,0:20:29.86:0,30,317	0/0:22,0:22:29.25:0,29,552	0/0:18,0:18:51.11:0,51,538	0/0:29,0:29:84.21:0,84,903	0/0:23,0:23:60.15:0,60,645	0/0:28,0:28:69.17:0,69,741	0/0:20,0:20:60.14:0,60,637	0/0:34,0:34:96.24:0,96,1032	0/0:16,0:16:45.11:0,45,484	0/0:16,0:16:42.09:0,42,443	0/0:24,0:24:66.15:0,66,701	0/0:25,0:25:66.12:0,66,691	0/0:18,0:17:45.09:0,45,476	1/1:3,14:17:39.13:513,39,0	0/0:31,0:31:78.16:0,78,827	0/0:19,0:19:54.13:0,54,580	0/0:18,0:18:48.10:0,48,508	0/0:26,0:26:72.18:0,72,774	0/0:21,0:21:60.15:0,60,645	0/0:15,0:15:45.11:0,45,484	0/0:16,0:16:45.09:0,45,474	0/0:19,0:19:51.13:0,51,548	0/0:26,0:26:75.18:0,75,799	0/0:18,0:18:54.13:0,54,574	0/0:16,0:16:45.11:0,45,483	0/0:15,0:15:45.11:0,45,484
chr10	49873787	.	GACACACACACACACAC	G	1010.23	PASS	AB=0.879;AC=10;AF=0.192;AN=52;BaseQRankSum=4.166;DP=539;FS=0.000;HRun=0;HaplotypeScore=206.7985;InbreedingCoeff=0.0756;MQ=69.03;MQ0=15;MQRankSum=-0.603;QD=6.60;ReadPosRankSum=0.075;VQSLOD=2.5653;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:30:32.78:0,33,1797	0/0:2,0:5:9.03:0,9,246	./.	./.	0/1:18,0:20:75.33:100,0,75	0/0:20,0:17:25.64:0,26,1545	0/0:27,0:25:31.35:0,31,1547	0/0:19,0:18:6.02:0,6,118	0/0:18,0:17:28.34:0,28,1646	0/1:22,4:27:51.31:296,0,51	0/1:11,0:12:2.63:3,0,12	0/0:17,0:18:18.06:0,18,964	0/0:15,0:14:8.24:0,8,338	0/1:12,1:14:34.32:230,0,34	0/1:7,0:10:2.77:26,0,3	0/0:16,0:18:24.05:0,24,1044	1/1:22,1:22:6.02:198,6,0	0/0:16,0:14:3.01:0,3,92	0/0:14,0:13:13.85:0,14,239	0/0:17,0:21:19.15:0,19,274	0/0:22,0:21:18.06:0,18,354	0/0:14,0:15:18.95:0,19,1133	0/0:12,0:12:9.03:0,9,653	0/0:35,0:35:39.13:0,39,2355	0/1:12,2:14:41.84:122,0,42	0/1:23,0:23:99:104,0,119	0/1:8,0:9:2.96:66,0,3	0/0:7,0:7:1.25:0,1,4
chr10	49874731	.	A	AT	1600.86	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-7.121;DP=519;FS=8.862;HRun=9;HaplotypeScore=60.4552;InbreedingCoeff=0.9545;MQ=76.22;MQ0=3;MQRankSum=0.132;QD=21.06;ReadPosRankSum=-2.216;VQSLOD=3.3490;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:42:99:0,117,1007	0/0:9,0:9:20.99:0,21,182	0/0:19,0:13:23.28:0,23,197	0/0:30,0:23:37.03:0,37,344	0/0:20,0:20:50.97:0,51,440	0/0:21,0:21:53.95:0,54,461	0/0:17,0:17:32.98:0,33,286	0/0:27,1:28:42.01:0,42,585	0/0:13,0:13:32.98:0,33,283	0/0:16,0:16:41.76:0,42,360	0/0:16,0:16:35.99:0,36,313	0/0:16,0:16:41.98:0,42,362	0/0:20,0:20:47.98:0,48,417	0/0:17,0:17:41.99:0,42,365	0/0:14,0:14:35.99:0,36,313	0/0:24,1:25:29.80:0,30,488	0/0:16,0:16:41.90:0,42,352	0/0:25,0:24:16.98:0,17,444	1/1:11,12:23:39.05:410,39,0	1/1:1,18:19:54.01:555,54,0	1/1:0,18:18:42.11:465,42,0	0/0:7,0:7:17.99:0,18,156	0/0:13,1:14:5.81:0,6,279	0/0:10,0:10:26.95:0,27,227	0/0:21,0:21:47.90:0,48,460	0/0:21,0:21:62.99:0,63,547	1/1:2,14:16:29.73:331,30,0	0/0:5,0:5:11.92:0,12,103
chr10	49878850	.	ATGTG	A	2388.54	PASS	AB=0.718;AC=17;AF=0.327;AN=52;BaseQRankSum=2.959;DP=672;FS=0.567;HRun=0;HaplotypeScore=125.2196;InbreedingCoeff=0.6677;MQ=61.37;MQ0=8;MQRankSum=2.191;QD=9.99;ReadPosRankSum=1.692;VQSLOD=2.8392;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:38:32.34:0,32,424	0/0:4,0:6:5.49:0,5,24	./.	./.	1/1:15,5:20:12.87:160,13,0	0/0:19,0:20:18.27:0,18,344	0/0:20,0:23:32.56:0,33,586	0/0:31,0:31:30.10:0,30,439	0/0:11,0:18:16.68:0,17,80	1/1:22,7:29:18.13:257,18,0	0/1:7,1:12:3.37:66,0,3	0/0:21,0:24:23.76:0,24,361	0/0:22,0:23:23.77:0,24,391	0/1:11,6:17:58.70:128,0,59	0/1:13,3:22:28.87:120,0,29	0/0:17,0:28:15.04:0,15,246	1/1:17,12:30:38.44:587,38,0	1/1:25,10:35:11.10:499,11,0	0/0:25,0:24:24.49:0,24,400	0/0:14,0:14:3.01:0,3,67	0/0:24,0:23:12.03:0,12,202	0/0:27,0:27:37.34:0,37,617	0/0:14,0:16:20.52:0,21,310	0/0:40,0:42:60.11:0,60,1135	1/1:17,10:28:17.72:260,18,0	1/1:19,7:26:21.03:265,21,0	0/0:18,0:16:2.61:0,3,39	1/1:14,5:19:15.05:233,15,0
chr10	49880088	.	G	GA	4244.23	PASS	AB=1.000;AC=12;AF=0.214;AN=56;BaseQRankSum=-11.036;DP=611;FS=3.323;HRun=6;HaplotypeScore=61.8460;InbreedingCoeff=0.8515;MQ=75.55;MQ0=0;MQRankSum=1.287;QD=25.88;ReadPosRankSum=-3.652;VQSLOD=3.5415;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:72.14:0,72,727	0/0:13,0:13:36.06:0,36,360	0/1:6,0:6:2.41:2,0,25	0/1:19,0:20:3.83:4,0,139	0/0:38,2:40:61.41:0,61,928	0/0:22,0:22:60.07:0,60,597	0/0:21,0:21:63.14:0,63,643	1/1:7,36:42:99:1200,102,0	0/0:18,0:18:45.09:0,45,457	0/0:31,0:31:84.19:0,84,856	0/0:22,0:22:57.12:0,57,579	0/0:13,0:13:36.07:0,36,360	0/0:16,0:16:42.09:0,42,428	0/0:10,0:10:30.07:0,30,306	0/0:30,0:30:84.19:0,84,857	0/0:21,0:21:63.13:0,63,635	0/0:16,0:16:45.09:0,45,452	0/0:20,0:20:54.12:0,54,551	1/1:2,14:16:42.13:527,42,0	1/1:2,27:29:72.19:888,72,0	1/1:0,16:16:42.13:528,42,0	0/0:24,0:24:69.15:0,69,699	0/0:21,0:21:57.13:0,57,581	0/0:14,0:14:33.07:0,33,337	0/0:24,0:24:72.16:0,72,733	0/0:29,0:29:87.15:0,87,865	1/1:4,30:34:87.28:1094,87,0	0/0:14,0:14:32.87:0,33,336
chr10	49880691	.	CA	C	15664.88	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=19.227;DP=802;FS=2.537;HRun=3;HaplotypeScore=97.4836;InbreedingCoeff=0.9999;MQ=90.63;MQ0=0;MQRankSum=-5.085;QD=34.58;ReadPosRankSum=2.090;VQSLOD=5.1745;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,48:49:99:1599,129,0	0/0:10,0:10:30.10:0,30,432	0/0:24,0:24:57.25:0,57,927	0/0:39,0:39:99:0,114,1531	1/1:1,14:15:45.13:544,45,0	0/0:19,0:19:51.17:0,51,734	0/0:28,0:28:78.26:0,78,1123	1/1:1,20:21:60.17:730,60,0	0/0:29,0:29:87.29:0,87,1252	1/1:2,31:33:93.29:1152,93,0	1/1:0,26:26:78.25:967,78,0	0/0:37,0:37:99:0,108,1503	0/0:42,0:42:99:0,120,1692	1/1:1,31:32:90.28:1115,90,0	0/0:41,0:41:99:0,120,1728	1/1:0,33:33:93.29:1153,93,0	1/1:0,35:35:93.29:1153,93,0	1/1:1,26:27:72.18:875,72,0	1/1:1,21:22:66.20:806,66,0	1/1:1,21:22:66.18:795,66,0	1/1:0,36:36:99:1302,105,0	0/0:32,0:32:84.26:0,84,1187	0/0:17,0:17:48.15:0,48,662	0/0:31,0:31:93.31:0,93,1339	1/1:1,18:19:39.12:480,39,0	1/1:2,33:35:99:1211,99,0	1/1:0,35:35:99:1299,105,0	1/1:0,13:13:39.12:483,39,0
chr10	49881519	.	AGAGAT	A	23654.54	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=16.525;DP=706;FS=20.176;HRun=0;HaplotypeScore=150.0427;InbreedingCoeff=0.9975;MQ=80.88;MQ0=2;MQRankSum=-8.273;QD=55.92;ReadPosRankSum=3.171;VQSLOD=4.2029;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,52:52:99:2863,129,0	1/1:0,15:15:45.15:996,45,0	0/0:26,0:26:70.96:0,71,1763	0/0:26,0:27:64.19:0,64,1665	1/1:4,26:29:57.09:1260,57,0	0/0:20,0:20:60.21:0,60,1935	0/0:36,0:36:99:0,102,3058	1/1:0,31:31:93.27:1911,93,0	0/0:30,0:30:84.29:0,84,2704	1/1:2,22:24:60.16:1337,60,0	1/1:2,12:14:30.10:660,30,0	0/0:27,0:27:81.28:0,81,2528	0/0:23,0:23:66.23:0,66,2102	1/1:0,24:24:63.22:1404,63,0	1/1:1,30:30:75.26:1672,75,0	1/1:0,23:23:54.19:1204,54,0	1/1:1,30:31:42.23:1700,42,0	1/1:0,21:21:60.16:1291,60,0	1/1:2,19:21:48.10:1012,48,0	1/1:0,26:26:75.26:1662,75,0	1/1:2,18:20:48.13:1059,48,0	0/0:33,0:33:99:0,99,3154	0/0:27,0:27:78.25:0,78,2438	0/0:34,0:34:99:0,99,3105	1/1:0,23:23:60.21:1326,60,0	1/1:1,17:18:51.16:1094,51,0	1/1:0,14:14:39.13:869,39,0	1/1:0,5:5:15.05:334,15,0
chr10	49881667	.	T	TTC	573.74	PASS	AB=1.000;AC=31;AF=0.646;AN=48;BaseQRankSum=3.707;DP=565;FS=2.708;HRun=0;HaplotypeScore=134.6235;InbreedingCoeff=0.3406;MQ=68.32;MQ0=15;MQRankSum=-2.486;QD=1.81;ReadPosRankSum=0.497;VQSLOD=2.0903;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:21:3:27,3,0	1/1:8,0:8:2.99:24,3,0	./.	./.	0/0:25,0:24:2.91:0,3,20	1/1:22,0:22:2.95:24,3,0	0/0:19,0:18:5.97:0,6,63	1/1:19,0:18:1.77:3,2,0	0/0:21,0:21:2.22:0,2,68	0/1:24,0:24:21.50:56,0,22	0/1:17,0:16:0.06:0,0,0	0/0:22,0:21:5.69:0,6,54	0/0:22,0:22:5.64:0,6,36	1/1:23,0:22:5.79:38,6,0	1/1:18,0:17:5.59:34,6,0	0/1:20,0:19:15.65:45,0,16	1/1:13,0:13:4.25:34,4,0	./.	1/1:16,0:16:8.90:47,9,0	1/1:11,0:11:6.44:45,6,0	1/1:17,0:16:4.83:42,5,0	./.	0/0:18,0:17:3:0,3,25	1/1:13,3:18:3.01:44,3,0	0/0:33,0:32:4:0,4,35	1/1:25,0:24:3.47:26,3,0	1/1:28,0:27:12.91:93,13,0	1/1:16,0:15:18.37:134,18,0
chr10	49881757	.	C	CTTGATG	27618.98	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=7.961;DP=525;FS=18.552;HRun=0;HaplotypeScore=132.8412;InbreedingCoeff=0.9964;MQ=80.43;MQ0=0;MQRankSum=-17.136;QD=84.46;ReadPosRankSum=-1.483;VQSLOD=4.4131;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,13:19:51.18:1728,51,0	1/1:1,13:14:29.69:1077,30,0	0/0:19,0:19:50.85:0,51,979	0/0:25,0:25:54.02:0,54,1160	1/1:5,13:19:33.11:1101,33,0	0/0:21,0:21:54.19:0,54,1276	0/0:25,0:25:63.20:0,63,1462	1/1:13,14:31:87.26:2665,87,0	0/0:17,0:17:51.16:0,51,1175	1/1:5,10:15:33:1107,33,0	1/1:7,7:14:30.10:964,30,0	0/0:18,0:18:54.19:0,54,1298	0/0:23,0:23:66.19:0,66,1532	1/1:8,26:34:93.32:3196,93,0	1/1:7,12:19:45.15:1602,45,0	1/1:3,18:21:54.19:1938,54,0	1/1:2,7:11:15.05:539,15,0	1/1:2,6:9:24.08:831,24,0	1/1:6,6:13:39.08:1173,39,0	1/1:2,19:21:60.21:2142,60,0	1/1:5,10:15:36.12:1195,36,0	0/0:10,0:10:30.09:0,30,674	0/0:18,0:18:51.18:0,51,1223	0/0:22,0:22:63.16:0,63,1414	1/1:4,18:22:57.20:2006,57,0	1/1:3,14:17:51.18:1803,51,0	1/1:1,19:22:54.18:1939,54,0	1/1:5,4:10:21.03:614,21,0
chr10	49882177	.	AT	A	12984.69	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=11.428;DP=552;FS=2.028;HRun=3;HaplotypeScore=56.4813;InbreedingCoeff=0.9990;MQ=77.28;MQ0=0;MQRankSum=-2.950;QD=33.04;ReadPosRankSum=3.975;VQSLOD=5.2281;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,40:41:99:1412,114,0	1/1:0,9:9:24.08:297,24,0	0/0:14,0:14:36.06:0,36,494	0/0:13,0:13:26.47:0,26,354	1/1:2,12:14:30.01:351,30,0	0/0:21,0:21:60.18:0,60,844	0/0:18,0:18:51.17:0,51,733	1/1:2,24:26:72.22:880,72,0	0/0:16,0:16:48.16:0,48,686	1/1:2,27:29:81.24:992,81,0	1/1:1,21:22:63.20:781,63,0	0/0:16,0:16:48.11:0,48,632	0/0:13,0:13:39.10:0,39,524	1/1:1,15:16:45.14:558,45,0	1/1:0,20:20:54.17:669,54,0	1/1:2,19:21:48.15:595,48,0	1/1:1,26:27:66.21:818,66,0	1/1:2,18:20:54.17:669,54,0	1/1:1,20:21:60.15:709,60,0	1/1:2,18:20:54.14:651,54,0	1/1:0,14:14:30.09:372,30,0	0/0:17,0:17:51.14:0,51,698	0/0:19,0:19:57.18:0,57,804	0/0:12,0:12:36.12:0,36,518	1/1:0,35:35:96.30:1190,96,0	1/1:2,23:25:69.22:855,69,0	1/1:0,25:25:72.23:890,72,0	1/1:0,8:8:24.08:297,24,0
chr10	49883580	.	A	AAT	428.13	PASS	AB=1.000;AC=18;AF=0.346;AN=52;BaseQRankSum=2.663;DP=351;FS=9.955;HRun=0;HaplotypeScore=87.4323;InbreedingCoeff=0.4851;MQ=82.01;MQ0=2;MQRankSum=-3.507;QD=3.32;ReadPosRankSum=-3.037;VQSLOD=0.4930;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:0.94:0,1,106	./.	0/0:18,0:14:18.04:0,18,215	0/0:22,0:15:11.94:0,12,151	1/1:6,0:6:5.99:50,6,0	0/0:20,0:20:51.17:0,51,662	0/0:12,0:12:30.10:0,30,390	0/1:43,0:41:24.21:24,0,317	0/0:17,0:17:48.12:0,48,581	1/1:5,0:5:6.46:59,6,0	1/1:5,0:5:3:25,3,0	0/0:18,0:18:42.14:0,42,545	0/0:9,0:9:24.08:0,24,315	1/1:6,0:6:3:25,3,0	./.	0/0:11,0:10:17.54:0,18,102	0/1:12,0:12:7.60:70,0,8	1/1:10,0:10:14.89:117,15,0	0/0:14,0:14:30.26:0,30,170	0/0:14,0:14:24.73:0,25,143	0/0:7,0:7:18.48:0,18,108	0/0:11,0:11:27.09:0,27,350	0/0:17,0:17:45.13:0,45,568	0/0:17,0:17:45.11:0,45,554	1/1:6,0:6:2.99:23,3,0	0/1:6,0:6:17.59:48,0,18	0/1:16,0:16:27.32:27,0,160	1/1:8,6:14:8.95:128,9,0
chr10	49883591	.	ATATG	A	1209.81	PASS	AC=16;AF=0.320;AN=50;BaseQRankSum=-7.381;DP=320;FS=7.586;HRun=0;HaplotypeScore=91.9516;InbreedingCoeff=0.7038;MQ=66.74;MQ0=3;MQRankSum=2.628;QD=10.43;ReadPosRankSum=2.636;VQSLOD=1.9787;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:11.07:0,11,157	./.	./.	./.	0/0:2,0:2:3.01:0,3,57	1/1:11,11:22:18.06:277,18,0	1/1:6,6:12:15.05:231,15,0	0/0:43,0:41:4.98:0,5,11	1/1:10,5:15:15.05:231,15,0	0/0:5,0:5:5.98:0,6,71	0/0:5,0:5:9.01:0,9,106	1/1:12,7:19:6.02:92,6,0	1/1:8,0:8:3.01:44,3,0	0/0:5,0:5:3:0,3,27	0/0:1,0:1:3.01:0,3,49	0/0:8,0:7:9.03:0,9,141	0/0:11,0:11:3.91:0,4,21	0/0:10,0:10:9.44:0,9,106	0/0:14,0:14:12.03:0,12,177	0/0:10,0:9:17.09:0,17,251	0/0:7,0:7:18.06:0,18,294	1/1:7,2:9:6.02:92,6,0	1/1:12,4:16:12.04:184,12,0	1/1:8,7:15:15.05:231,15,0	0/0:9,0:9:12.91:0,13,153	0/0:5,0:5:7.26:0,7,83	0/0:15,0:15:21.05:0,21,322	0/0:12,0:12:11.47:0,11,94
chr10	49884617	.	C	CCATAT	141.10	PASS	AB=0.972;AC=8;AF=0.143;AN=56;BaseQRankSum=7.355;DP=509;FS=26.590;HRun=0;HaplotypeScore=146.0568;InbreedingCoeff=0.1137;MQ=34.81;MQ0=44;MQRankSum=-4.435;QD=1.25;ReadPosRankSum=-0.120;VQSLOD=0.8848;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:24:37.99:38,0,364	0/0:9,0:9:8.64:0,9,135	0/0:45,0:11:22.37:0,22,576	0/0:51,0:17:50.82:0,51,992	0/0:16,2:18:9.02:0,9,119	0/0:17,0:17:2.44:0,2,140	1/1:6,0:5:1.31:11,1,0	0/0:17,0:17:16.38:0,16,631	0/0:12,0:12:12.98:0,13,258	0/1:12,1:13:93.21:93,0,426	0/1:18,0:18:14.54:15,0,238	0/0:10,0:10:2.76:0,3,35	0/0:12,0:13:22.22:0,22,296	0/0:17,1:17:15.51:0,16,252	0/0:27,0:28:6.61:0,7,96	1/1:26,0:25:7.57:38,8,0	0/0:8,0:9:1.86:0,2,151	0/0:14,0:13:11.81:0,12,503	0/0:12,0:10:21.46:0,21,399	0/0:28,1:29:32.79:0,33,584	0/0:20,0:17:41.59:0,42,786	0/0:23,0:21:2.86:0,3,68	0/0:6,0:6:3.01:0,3,69	0/0:5,0:5:3.01:0,3,48	0/1:19,1:20:66.01:72,0,66	0/0:14,0:12:16.77:0,17,575	0/0:19,0:19:9.68:0,10,450	0/0:6,0:6:13.10:0,13,232
chr10	49884913	.	ACT	A	110.47	PASS	AB=0.883;AC=12;AF=0.375;AN=32;BaseQRankSum=-2.096;DP=98;FS=0.000;HRun=0;HaplotypeScore=81.8197;InbreedingCoeff=0.3080;MQ=63.09;MQ0=6;MQRankSum=-0.059;QD=3.95;ReadPosRankSum=-2.135;VQSLOD=1.2077;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,1:2:3.01:38,3,0	1/1:0,2:2:6.02:73,6,0	0/0:5,0:2:3.01:0,3,36	0/0:6,0:4:4.14:0,4,71	0/0:2,1:3:2.84:0,3,14	1/1:4,0:4:2.74:12,3,0	./.	./.	0/1:3,0:3:0:0,0,0	0/0:4,0:4:9.67:0,10,47	./.	./.	0/1:6,0:6:15.84:50,0,16	0/0:1,0:1:1.55:0,2,4	./.	./.	0/0:4,0:3:4.05:0,4,10	0/1:2,0:2:4.10:7,0,4	1/1:0,1:1:3.01:34,3,0	./.	0/1:1,7:8:0.05:0,0,0	./.	./.	./.	0/0:6,1:7:5.39:0,5,22	0/0:5,0:5:12.56:0,13,62	./.	./.
chr10	49884933	.	AAT	A	476.05	PASS	AB=0.714;AC=33;AF=0.786;AN=42;BaseQRankSum=2.197;DP=115;FS=19.173;HRun=0;HaplotypeScore=89.6688;InbreedingCoeff=0.3470;MQ=68.47;MQ0=0;MQRankSum=-2.403;QD=7.32;ReadPosRankSum=1.854;VQSLOD=1.5240;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,0:2:3.01:38,3,0	1/1:3,0:3:8.96:90,9,0	0/0:7,0:4:11.75:0,12,111	0/0:4,0:3:0:0,0,0	0/0:3,0:3:0.47:0,0,1	1/1:2,3:5:3:28,3,0	./.	./.	0/1:3,2:5:0:0,0,0	1/1:5,0:5:3.96:24,4,0	./.	1/1:4,2:6:3.01:35,3,0	1/1:4,3:7:10.03:122,10,0	1/1:1,0:1:2.84:14,3,0	1/1:2,0:2:5.93:41,6,0	1/1:2,0:2:1.36:2,1,0	1/1:4,0:3:8.48:41,8,0	1/1:2,0:2:5.59:26,6,0	1/1:1,0:1:3.01:31,3,0	1/1:5,0:5:2.97:20,3,0	0/0:10,1:11:0.79:0,1,3	./.	./.	./.	1/1:8,0:8:5.68:28,6,0	1/1:6,0:6:8.64:31,9,0	1/1:1,0:1:0.47:1,0,0	./.
chr10	49884946	.	CTCA	C	540.62	PASS	AB=0.827;AC=19;AF=0.413;AN=46;BaseQRankSum=2.397;DP=162;FS=5.755;HRun=0;HaplotypeScore=104.8810;InbreedingCoeff=0.1172;MQ=65.85;MQ0=0;MQRankSum=-0.807;QD=4.91;ReadPosRankSum=1.031;VQSLOD=1.8368;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:4,1:5:3.01:55,3,0	0/1:1,2:3:16.09:61,0,16	0/1:10,0:6:0.58:1,0,44	0/0:6,0:5:4.52:0,5,35	0/1:7,3:10:5.82:14,0,6	0/0:6,0:6:3.01:0,3,36	./.	./.	0/1:4,0:5:0.25:0,0,0	0/1:4,1:5:43.50:44,0,84	0/1:7,3:10:0:0,0,0	0/0:10,0:8:2.97:0,3,30	0/0:6,0:6:9.02:0,9,128	1/1:0,1:1:3.01:56,3,0	0/0:2,0:2:5.99:0,6,48	0/0:3,0:3:6.02:0,6,73	1/1:0,4:3:9.03:167,9,0	0/1:2,2:3:14.71:65,0,15	./.	0/0:4,3:7:2.99:0,3,24	0/1:10,6:17:0.23:0,0,1	0/1:7,0:7:0:0,0,0	./.	0/1:9,0:8:0:0,0,0	1/1:7,6:14:8.99:132,9,0	0/1:4,1:6:66.67:67,0,87	0/0:1,0:1:3.01:0,3,35	./.
chr10	49884960	.	CG	C	195.29	PASS	AB=0.952;AC=15;AF=0.326;AN=46;BaseQRankSum=2.781;DP=171;FS=2.534;HRun=1;HaplotypeScore=98.4042;InbreedingCoeff=0.3507;MQ=58.06;MQ0=0;MQRankSum=-0.386;QD=2.38;ReadPosRankSum=-0.129;VQSLOD=-0.7015;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,1:7:3.01:42,3,0	0/0:1,0:1:2.99:0,3,24	0/0:14,0:9:9.66:0,10,135	0/1:11,0:5:21.75:22,0,66	0/0:7,2:9:0.89:0,1,2	./.	0/0:6,0:5:5.90:0,6,41	./.	0/1:3,0:4:0.01:0,0,0	0/0:8,0:8:20.65:0,21,154	0/1:8,1:9:0:0,0,0	0/0:12,0:9:2.91:0,3,25	0/0:8,0:8:5.86:0,6,36	1/1:1,1:2:3.01:42,3,0	0/0:2,0:2:5.99:0,6,48	0/0:6,0:6:5.99:0,6,49	1/1:0,3:3:9.03:120,9,0	0/1:2,0:2:0.94:1,0,23	./.	0/0:4,1:5:2.99:0,3,24	0/1:10,5:16:0.22:0,0,2	0/1:6,0:6:0:0,0,0	./.	0/1:10,0:9:0:0,0,0	1/1:8,2:10:6.02:83,6,0	0/0:5,0:5:14.93:0,15,117	0/0:1,0:1:3:0,3,25	./.
chr10	49884965	.	AT	A	1042.58	PASS	AB=0.705;AC=32;AF=0.667;AN=48;BaseQRankSum=-0.679;DP=201;FS=3.996;HRun=1;HaplotypeScore=95.5928;InbreedingCoeff=0.2845;MQ=57.29;MQ0=5;MQRankSum=-2.568;QD=6.60;ReadPosRankSum=2.087;VQSLOD=0.8849;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,5:9:0.89:2,1,0	1/1:0,1:1:3.01:41,3,0	0/1:17,0:11:11.10:11,0,224	0/1:17,3:9:57.98:58,0,150	0/0:3,7:10:0.89:0,1,2	./.	1/1:0,6:5:6.02:79,6,0	./.	0/1:1,4:5:0:0,0,0	1/1:1,10:10:27.09:365,27,0	0/1:1,8:9:0:0,0,0	1/1:0,12:9:3.01:42,3,0	1/1:0,6:6:6.02:79,6,0	0/0:1,1:2:0.75:0,1,2	1/1:3,2:3:6.02:83,6,0	1/1:0,6:6:5.90:83,6,0	0/0:4,0:3:7.18:0,7,29	1/1:4,0:3:0.97:4,1,0	0/0:1,0:1:3.01:0,3,47	1/1:2,4:5:3.01:41,3,0	0/1:10,6:16:0.22:0,0,2	0/1:1,5:6:0:0,0,0	./.	1/1:4,7:10:2.94:20,3,0	0/0:2,9:11:3.47:0,3,9	1/1:0,5:5:15.05:207,15,0	1/1:0,3:3:3.01:42,3,0	./.
chr10	49884968	.	ACAG	A	856.84	PASS	AB=0.983;AC=35;AF=0.700;AN=50;BaseQRankSum=0.476;DP=232;FS=2.980;HRun=0;HaplotypeScore=106.1734;InbreedingCoeff=0.1683;MQ=57.60;MQ0=6;MQRankSum=-1.841;QD=4.42;ReadPosRankSum=1.642;VQSLOD=1.8378;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:8,1:9:3.01:51,3,0	1/1:3,0:3:3.87:23,4,0	0/1:20,0:13:12.10:12,0,306	0/1:23,0:12:44.81:45,0,171	0/0:10,0:10:2.56:0,3,11	./.	1/1:7,0:6:6.88:70,7,0	0/0:1,0:1:3.01:0,3,34	0/1:6,0:6:0.24:0,0,0	1/1:13,0:12:32.89:279,33,0	0/1:11,0:11:0.02:0,0,0	1/1:14,0:11:5.91:39,6,0	1/1:7,0:7:6:61,6,0	0/1:3,0:3:0:0,0,0	1/1:7,0:5:5.97:44,6,0	1/1:8,0:7:5.97:43,6,0	0/1:4,0:3:8.24:22,0,8	1/1:3,1:3:2.94:18,3,0	0/1:2,0:2:6.32:15,0,6	1/1:7,0:6:2.97:21,3,0	0/1:14,3:17:0.25:0,0,1	0/1:7,0:7:0:0,0,1	./.	1/1:11,1:11:4.20:22,4,0	0/0:11,0:11:2.94:0,3,18	1/1:6,0:6:17.99:189,18,0	1/1:3,0:3:2.98:21,3,0	./.
chr10	49884970	.	AG	A	1638.59	PASS	AB=0.673;AC=39;AF=0.750;AN=52;BaseQRankSum=-1.617;DP=238;FS=0.000;HRun=1;HaplotypeScore=94.5619;InbreedingCoeff=0.2512;MQ=57.98;MQ0=6;MQRankSum=-0.888;QD=7.66;ReadPosRankSum=0.799;VQSLOD=0.5949;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,5:8:2.68:11,3,0	1/1:0,3:3:6.02:83,6,0	0/1:20,3:13:20.36:20,0,245	0/1:17,6:12:99:120,0,119	1/1:3,7:11:4.74:48,5,0	./.	1/1:2,6:7:9.03:121,9,0	0/0:1,0:1:3.01:0,3,37	0/1:2,4:7:0:0,0,0	1/1:0,11:12:33.10:426,33,0	0/1:1,10:11:0.31:0,0,0	1/1:0,14:11:6.02:84,6,0	1/1:1,6:7:6.02:79,6,0	0/1:0,1:3:0:0,0,0	1/1:0,6:5:6.02:83,6,0	1/1:0,8:7:5.90:83,6,0	0/0:2,0:3:2.70:0,3,7	1/1:1,0:3:2.04:6,2,0	1/1:0,2:2:6.02:84,6,0	1/1:2,4:6:6.02:79,6,0	0/1:5,10:18:0.22:0,0,1	0/1:0,8:8:0:0,0,1	1/1:1,5:6:3:25,3,0	1/1:1,10:11:6.02:83,6,0	0/0:1,9:10:1.25:0,1,3	1/1:2,5:7:21.05:272,21,0	1/1:0,3:3:3.01:42,3,0	./.
chr10	49885116	.	CA	C	776.83	PASS	AB=0.827;AC=22;AF=0.440;AN=50;BaseQRankSum=9.897;DP=449;FS=1.486;HRun=1;HaplotypeScore=132.5905;InbreedingCoeff=0.4191;MQ=39.69;MQ0=38;MQRankSum=-7.465;QD=5.36;ReadPosRankSum=-2.243;VQSLOD=-0.2872;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,10:18:11.41:94,11,0	1/1:4,0:3:1.81:5,2,0	0/0:52,0:11:28.63:0,29,331	0/0:61,0:16:14.22:0,14,402	0/1:6,1:6:0:0,0,0	0/0:15,0:15:26.29:0,26,342	0/0:22,0:22:35.69:0,36,496	0/0:13,0:11:30.05:0,30,355	0/0:17,0:17:32.32:0,32,417	0/1:10,1:9:47.37:47,0,192	1/1:4,0:3:0.35:1,0,0	0/0:23,0:22:57.14:0,57,723	0/0:16,0:15:27.77:0,28,413	./.	1/1:19,0:18:10.05:153,10,0	0/1:5,3:8:20.14:34,0,20	1/1:11,0:10:13.52:126,14,0	0/1:4,0:4:14.96:43,0,15	0/1:4,5:9:71:194,0,71	1/1:6,5:9:3.01:37,3,0	1/1:15,11:23:14.55:171,15,0	0/0:23,0:23:26.75:0,27,381	0/0:15,0:15:26.30:0,26,332	0/0:46,0:45:86.62:0,87,1132	1/1:4,0:3:2.60:10,3,0	./.	0/1:6,2:7:26.69:27,0,88	./.
chr10	49885118	.	CA	C	762.77	PASS	AB=0.941;AC=23;AF=0.460;AN=50;BaseQRankSum=10.301;DP=455;FS=1.405;HRun=1;HaplotypeScore=136.2861;InbreedingCoeff=0.3443;MQ=38.00;MQ0=38;MQRankSum=-7.461;QD=4.59;ReadPosRankSum=-2.681;VQSLOD=-0.7082;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:17:13.62:111,14,0	1/1:3,1:3:1.81:5,2,0	0/0:47,0:8:22.31:0,22,269	0/0:57,0:12:22.62:0,23,323	0/1:6,1:6:0:0,0,0	0/0:15,0:15:26.29:0,26,342	0/0:24,0:24:41.65:0,42,555	0/1:16,0:14:32.69:33,0,276	0/0:18,0:18:35.33:0,35,454	0/1:11,0:9:40.12:40,0,193	1/1:4,0:3:0.35:1,0,0	0/0:26,0:23:57.18:0,57,742	0/0:15,1:15:9.26:0,9,412	./.	1/1:15,4:18:5.18:129,5,0	0/1:9,0:9:15.36:40,0,15	1/1:8,3:11:13.81:114,14,0	0/1:3,1:4:6.86:48,0,7	0/1:9,1:10:44.31:178,0,44	1/1:11,0:9:3.01:34,3,0	1/1:28,2:26:14.26:156,14,0	0/0:23,0:23:26.75:0,27,381	0/0:15,0:15:26.30:0,26,332	0/0:46,0:45:86.62:0,87,1132	1/1:3,1:3:2.60:10,3,0	./.	0/1:8,0:7:26.67:27,0,76	./.
chr10	49885119	.	A	AG	971.32	PASS	AB=0.943;AC=23;AF=0.479;AN=48;BaseQRankSum=9.548;DP=458;FS=0.690;HRun=0;HaplotypeScore=137.7130;InbreedingCoeff=0.4991;MQ=37.78;MQ0=39;MQRankSum=-7.662;QD=5.92;ReadPosRankSum=-1.964;VQSLOD=2.6628;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:17:10.43:118,10,0	./.	0/0:48,0:8:21.07:0,21,290	0/0:57,1:11:29.46:0,29,374	0/1:7,0:6:0:0,0,0	0/0:15,0:15:26.98:0,27,352	0/0:23,0:23:44.88:0,45,587	0/1:16,0:14:81.96:82,0,232	0/0:18,0:18:36.06:0,36,469	0/1:10,1:9:53.29:53,0,172	1/1:3,1:3:0.37:1,0,0	0/0:26,0:23:57.19:0,57,786	0/0:16,0:15:19.25:0,19,440	./.	1/1:18,3:19:5.13:202,5,0	1/1:9,0:9:4.63:59,5,0	1/1:9,4:13:15.51:180,16,0	0/1:3,1:4:0.87:72,0,1	1/1:10,0:10:2.27:150,2,0	1/1:11,0:9:3.01:31,3,0	1/1:29,0:25:14.28:164,14,0	0/0:23,0:23:26.75:0,27,374	0/0:15,0:15:29.96:0,30,351	0/0:46,0:45:87.23:0,87,1187	1/1:4,0:3:2.22:7,2,0	./.	0/1:7,0:6:14.68:15,0,51	./.
chr10	49885120	.	CA	C	729.68	PASS	AB=0.967;AC=24;AF=0.480;AN=50;BaseQRankSum=10.298;DP=459;FS=2.230;HRun=1;HaplotypeScore=136.7420;InbreedingCoeff=0.4116;MQ=37.85;MQ0=39;MQRankSum=-7.086;QD=4.34;ReadPosRankSum=-1.544;VQSLOD=-0.2690;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:17,1:17:13.21:109,13,0	1/1:4,0:3:1.81:5,2,0	0/0:47,0:8:21.07:0,21,266	0/0:60,0:11:23.45:0,23,333	0/1:7,0:6:0:0,0,0	0/0:15,0:15:26.29:0,26,341	0/0:24,0:24:44.55:0,45,534	0/1:16,0:14:71.37:71,0,170	0/0:19,0:19:38.28:0,38,461	0/1:11,0:9:30.96:31,0,178	1/1:4,0:3:0.35:1,0,0	0/0:26,0:23:60.19:0,60,780	0/0:16,0:15:2.25:0,2,405	./.	1/1:21,0:19:3.09:102,3,0	0/1:9,0:9:11.57:46,0,12	1/1:13,0:13:13.75:113,14,0	0/1:3,1:4:0.83:37,0,1	1/1:10,0:10:4.02:164,4,0	1/1:11,0:9:3:28,3,0	1/1:26,4:26:16.85:159,17,0	0/0:23,0:23:26.75:0,27,381	0/0:14,0:14:23.29:0,23,294	0/0:46,0:45:86.57:0,87,1102	1/1:4,0:3:2.60:10,3,0	./.	0/1:6,0:5:15.18:15,0,29	./.
chr10	49885121	.	A	AG	1565.14	PASS	AB=0.839;AC=23;AF=0.500;AN=46;BaseQRankSum=9.859;DP=428;FS=2.342;HRun=0;HaplotypeScore=123.8446;InbreedingCoeff=0.6386;MQ=38.12;MQ0=37;MQRankSum=-7.451;QD=11.34;ReadPosRankSum=-2.366;VQSLOD=3.5615;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,10:12:12.51:175,13,0	./.	0/0:47,0:8:21.06:0,21,271	0/0:56,0:9:24.08:0,24,331	0/1:5,1:5:0:0,0,0	0/0:15,0:15:26.96:0,27,334	0/0:21,0:21:35.86:0,36,480	0/1:8,4:10:28.33:236,0,28	0/0:20,0:20:36.05:0,36,459	0/1:9,1:8:70.03:70,0,146	1/1:4,0:3:0.37:1,0,0	0/0:26,0:23:60.20:0,60,827	0/0:16,0:15:25.79:0,26,446	./.	1/1:21,0:19:4.58:199,5,0	1/1:2,4:6:9.01:113,9,0	1/1:11,1:12:12.45:182,12,0	1/1:4,0:4:3.69:87,4,0	1/1:4,5:9:26.74:334,27,0	1/1:2,5:5:3.01:44,3,0	1/1:12,15:23:9.80:206,10,0	0/0:23,0:23:26.75:0,27,374	0/0:14,0:14:24.03:0,24,310	0/0:44,0:43:81.21:0,81,1108	./.	./.	1/1:5,2:6:5.69:88,6,0	./.
chr10	49885123	.	A	AG	1318.02	PASS	AB=0.950;AC=22;AF=0.478;AN=46;BaseQRankSum=9.267;DP=404;FS=1.476;HRun=0;HaplotypeScore=115.8328;InbreedingCoeff=0.6254;MQ=38.41;MQ0=39;MQRankSum=-6.877;QD=10.80;ReadPosRankSum=-0.607;VQSLOD=4.0350;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:12:12.51:164,13,0	./.	0/0:44,0:8:21.06:0,21,273	0/0:56,0:9:24.08:0,24,328	0/1:3,1:3:0:0,0,0	0/0:14,0:14:23.97:0,24,311	0/0:21,0:21:38.84:0,39,516	0/1:12,0:10:42.48:216,0,42	0/0:20,0:20:39.55:0,40,515	0/1:9,0:7:62.21:62,0,146	1/1:4,0:3:0.37:1,0,0	0/0:26,0:23:63.17:0,63,849	0/0:16,0:15:34.88:0,35,459	./.	1/1:8,4:10:15.03:152,15,0	1/1:5,0:5:6.02:83,6,0	1/1:7,3:10:11.08:137,11,0	1/1:2,1:3:6.02:79,6,0	1/1:7,1:8:23.66:286,24,0	1/1:8,0:6:3.01:42,3,0	1/1:25,2:23:14.77:194,15,0	0/0:22,0:22:26.75:0,27,374	0/0:14,0:14:27.03:0,27,342	0/0:44,0:43:81.21:0,81,1108	./.	./.	0/1:7,0:6:2.47:72,0,2	./.
chr10	49885125	.	A	AG	680.90	PASS	AB=1.000;AC=22;AF=0.478;AN=46;BaseQRankSum=9.283;DP=401;FS=0.730;HRun=0;HaplotypeScore=114.5454;InbreedingCoeff=0.5937;MQ=36.24;MQ0=46;MQRankSum=-6.760;QD=5.54;ReadPosRankSum=1.155;VQSLOD=3.5129;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:12,1:12:11.93:97,12,0	./.	0/0:40,0:7:18.06:0,18,246	0/0:54,0:7:21.07:0,21,290	0/1:5,0:3:0:0,0,0	0/0:14,0:14:23.97:0,24,311	0/0:22,0:21:38.88:0,39,538	0/1:11,0:9:50.57:97,0,51	0/0:20,0:19:36.91:0,37,456	0/1:9,0:7:42.61:43,0,146	1/1:4,0:3:0.37:1,0,0	0/0:26,0:23:63.21:0,63,870	0/0:19,0:17:33.87:0,34,456	./.	1/1:12,0:10:10.16:35,10,0	1/1:6,0:5:6.01:61,6,0	1/1:10,0:10:9.56:117,10,0	1/1:2,0:3:6.01:64,6,0	1/1:8,0:8:9.92:159,10,0	1/1:8,0:6:3.01:31,3,0	1/1:23,4:23:14.73:137,15,0	0/0:21,0:21:26.75:0,27,374	0/0:14,0:14:30.04:0,30,387	0/0:43,0:42:81.21:0,81,1108	./.	./.	0/1:7,0:6:5.23:5,0,43	./.
chr10	49885126	.	CA	C	568.77	PASS	AB=0.967;AC=23;AF=0.500;AN=46;BaseQRankSum=10.219;DP=401;FS=1.381;HRun=1;HaplotypeScore=116.1114;InbreedingCoeff=0.6647;MQ=36.28;MQ0=47;MQRankSum=-8.343;QD=4.62;ReadPosRankSum=-0.834;VQSLOD=0.0385;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:12:7.97:28,8,0	./.	0/0:40,0:7:18.06:0,18,227	0/0:52,0:7:21.07:0,21,267	0/1:5,0:3:0:0,0,0	0/0:14,0:14:23.28:0,23,304	0/0:22,0:21:35.53:0,36,497	0/1:11,0:9:19.07:27,0,19	0/0:20,0:19:33.56:0,34,417	0/1:8,1:7:27.39:27,0,161	1/1:3,1:3:0.35:1,0,0	0/0:27,0:24:64.09:0,64,820	0/0:19,0:17:19.04:0,19,422	./.	1/1:7,5:10:15.05:193,15,0	1/1:6,0:5:4.74:16,5,0	1/1:4,6:10:21.03:223,21,0	1/1:2,1:3:6.02:69,6,0	1/1:8,0:8:16.32:66,16,0	1/1:8,0:6:2.37:8,2,0	1/1:27,0:23:11.58:48,12,0	0/0:21,0:21:26.75:0,27,381	0/0:14,0:14:29.31:0,29,369	0/0:43,0:42:80.60:0,81,1056	./.	./.	1/1:7,0:6:10.59:33,11,0	./.
chr10	49885128	.	CA	C	1414.20	PASS	AB=0.841;AC=22;AF=0.458;AN=48;BaseQRankSum=9.922;DP=400;FS=0.650;HRun=1;HaplotypeScore=113.9472;InbreedingCoeff=0.6233;MQ=36.21;MQ0=52;MQRankSum=-7.895;QD=11.31;ReadPosRankSum=0.472;VQSLOD=1.7582;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,11:12:12.04:160,12,0	0/0:2,0:1:3.01:0,3,30	0/0:39,0:7:18.06:0,18,228	0/0:51,0:7:21.07:0,21,267	0/1:4,1:3:0:0,0,0	0/0:15,0:15:23.28:0,23,304	0/0:22,0:21:38.46:0,38,517	0/1:5,7:9:1.49:255,0,1	0/0:18,0:17:30.31:0,30,381	0/1:8,1:7:56.66:57,0,160	1/1:4,0:3:0.35:1,0,0	0/0:27,0:24:64.09:0,64,820	0/0:19,0:17:32.81:0,33,438	./.	0/1:12,0:10:13.78:31,0,14	1/1:1,5:5:6.02:80,6,0	1/1:9,1:10:21.05:221,21,0	1/1:3,0:3:6.02:68,6,0	1/1:3,6:8:23.28:276,23,0	1/1:2,6:6:3.01:40,3,0	1/1:10,17:23:14.29:199,14,0	0/0:21,0:21:26.75:0,27,381	0/0:14,0:14:29.31:0,29,369	0/0:44,0:43:83.56:0,84,1076	./.	./.	1/1:1,6:6:15.05:199,15,0	./.
chr10	49885130	.	C	CCAT	1317.27	PASS	AB=0.967;AC=25;AF=0.500;AN=50;BaseQRankSum=10.332;DP=398;FS=1.367;HRun=0;HaplotypeScore=120.3363;InbreedingCoeff=0.5583;MQ=36.37;MQ0=56;MQRankSum=-7.729;QD=10.21;ReadPosRankSum=0.713;VQSLOD=3.5351;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:13,0:12:0.39:75,0,0	1/1:1,1:1:2.94:18,3,0	0/0:37,0:7:18.06:0,18,313	0/0:47,0:7:21.07:0,21,357	0/1:4,1:3:0:0,0,0	0/0:16,0:16:24:0,24,418	0/0:21,0:20:38.92:0,39,714	0/1:12,0:9:17.12:132,0,17	0/0:18,0:17:31.52:0,32,516	0/1:9,0:7:63.21:63,0,105	1/1:4,0:3:0.94:2,1,0	0/0:27,0:24:63.69:0,64,1136	0/0:19,0:17:35.60:0,36,553	./.	1/1:8,4:10:17.99:311,18,0	0/1:7,0:5:19.66:32,0,20	1/1:7,3:10:21.07:348,21,0	1/1:2,1:3:6.02:111,6,0	1/1:8,0:8:23.18:153,23,0	1/1:8,0:6:2.98:22,3,0	1/1:25,0:23:14.74:106,15,0	0/0:22,0:22:26.75:0,27,476	0/0:14,0:14:30.08:0,30,490	0/0:45,0:44:84.23:0,84,1471	./.	./.	1/1:7,0:6:14.93:114,15,0	1/1:1,0:1:1.55:4,2,0
chr10	49885132	.	CA	C	173.43	PASS	AB=0.871;AC=10;AF=0.192;AN=52;BaseQRankSum=5.097;DP=389;FS=2.616;HRun=1;HaplotypeScore=114.4363;InbreedingCoeff=0.4743;MQ=36.29;MQ0=55;MQRankSum=-3.664;QD=3.77;ReadPosRankSum=-0.798;VQSLOD=0.0165;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:9.13:0,9,36	0/0:2,0:1:2.84:0,3,14	0/0:33,0:7:18.06:0,18,227	0/0:45,0:6:18.06:0,18,228	0/1:4,1:3:0:0,0,0	0/0:16,0:16:23.28:0,23,304	0/0:22,0:21:41.86:0,42,555	0/1:12,0:9:0.40:0,0,1	0/0:17,0:16:27.87:0,28,345	0/0:8,1:7:0.67:0,1,163	1/1:3,1:3:0.35:1,0,0	0/0:27,0:24:63.67:0,64,820	0/0:18,0:16:31.29:0,31,403	./.	0/0:12,0:10:14.88:0,15,57	0/0:7,0:5:9.47:0,9,51	1/1:1,9:10:21.03:208,21,0	1/1:1,2:3:6.02:64,6,0	0/1:8,1:8:12.82:13,0,18	0/0:8,0:6:1.45:0,1,4	0/0:23,0:23:7.50:0,7,26	0/0:21,0:21:23.74:0,24,342	0/0:13,0:13:26.30:0,26,331	0/0:45,0:44:83.54:0,84,1060	0/1:2,1:2:0:0,0,0	./.	0/0:7,0:6:3.43:0,3,10	0/0:1,0:1:2.97:0,3,20
chr10	49887098	.	G	GGTGT	150.39	PASS	AB=0.946;AC=13;AF=0.271;AN=48;BaseQRankSum=2.311;DP=618;FS=1.122;HRun=0;HaplotypeScore=115.8121;InbreedingCoeff=0.3654;MQ=70.84;MQ0=14;MQRankSum=-0.920;QD=0.81;ReadPosRankSum=-1.558;VQSLOD=1.6685;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/1:5,0:7:2.95:3,0,81	./.	./.	0/0:14,0:14:9.03:0,9,136	0/1:20,0:20:9.96:10,0,131	0/0:27,0:28:8.86:0,9,101	./.	0/0:24,0:23:5.81:0,6,91	0/0:18,0:18:8.77:0,9,102	0/0:14,0:15:3.68:0,4,136	1/1:13,4:22:3.01:64,3,0	0/0:14,0:16:6.01:0,6,74	0/0:26,0:28:24.06:0,24,327	1/1:19,0:19:11.34:58,11,0	1/1:11,3:17:6.02:123,6,0	0/0:19,0:24:11.98:0,12,155	0/0:20,0:21:0.01:0,0,211	0/0:28,0:27:3:0,3,27	0/1:11,0:16:0:0,0,0	0/1:32,0:30:0:0,0,0	0/0:18,0:19:5.62:0,6,217	0/0:15,0:14:5.79:0,6,38	0/0:33,0:35:30.08:0,30,418	0/0:18,0:17:9.03:0,9,133	1/1:31,0:29:3.22:14,3,0	0/1:12,0:20:0.16:0,0,122	0/0:10,0:8:12.91:0,13,168
chr10	49888528	.	TA	T	8413	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=12.203;DP=553;FS=3.077;HRun=10;HaplotypeScore=85.1158;InbreedingCoeff=0.9838;MQ=68.83;MQ0=0;MQRankSum=-1.789;QD=22.20;ReadPosRankSum=0.939;VQSLOD=5.5381;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,19:21:56.98:495,57,0	1/1:0,11:11:26.99:234,27,0	0/0:9,0:8:20.89:0,21,208	0/0:10,0:10:13.04:0,13,152	1/1:3,21:24:59.97:521,60,0	0/0:23,0:23:60.15:0,60,657	0/0:11,0:12:33.56:0,34,366	1/1:6,17:23:50.98:443,51,0	0/0:19,0:19:48.12:0,48,523	1/1:2,23:25:68.98:599,69,0	1/1:1,18:19:50.99:443,51,0	0/0:21,0:21:30.56:0,31,533	0/0:23,0:23:69.16:0,69,751	1/1:0,12:12:32.99:287,33,0	1/1:4,22:26:59.98:521,60,0	1/1:2,21:23:59.99:521,60,0	1/1:1,25:27:74.02:631,74,0	1/1:0,18:18:53.99:469,54,0	1/1:4,17:21:47.98:416,48,0	1/1:2,18:20:53.98:469,54,0	1/1:3,5:8:14.99:130,15,0	0/0:16,0:16:33.06:0,33,343	0/0:26,0:26:75.19:0,75,815	0/0:15,0:15:42.11:0,42,465	1/1:2,29:31:86.98:755,87,0	1/1:2,25:27:71.94:615,72,0	1/1:4,33:38:92.01:787,92,0	1/1:0,4:4:8.74:78,9,0
chr10	49890947	.	A	ACTT	27718.92	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=11.949;DP=754;FS=0.930;HRun=0;HaplotypeScore=124.8894;InbreedingCoeff=0.9999;MQ=59.85;MQ0=1;MQRankSum=-6.092;QD=55.88;ReadPosRankSum=1.485;VQSLOD=6.8322;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,48:53:99:2924,135,0	1/1:0,17:17:42.14:938,42,0	0/0:29,0:22:56.85:0,57,790	0/0:31,0:27:72.06:0,72,1073	1/1:0,30:31:66.18:1424,66,0	0/0:18,0:18:51.12:0,51,812	0/0:24,0:24:69.24:0,69,1177	1/1:8,23:29:66.19:1380,66,0	0/0:27,0:27:78.27:0,78,1330	1/1:3,27:30:84.29:1925,84,0	1/1:0,17:18:39.13:892,39,0	0/0:28,0:28:84.28:0,84,1404	0/0:30,0:30:90.31:0,90,1532	1/1:0,27:27:69.24:1576,69,0	1/1:1,23:24:60.21:1352,60,0	1/1:0,29:29:84.29:1924,84,0	1/1:4,22:26:63.22:1392,63,0	1/1:1,20:22:60.21:1382,60,0	1/1:6,23:29:84.04:1634,84,0	1/1:2,21:23:60.21:1319,60,0	1/1:2,42:44:99:2110,99,0	0/0:22,0:22:66.22:0,66,1101	0/0:20,0:20:60.20:0,60,996	0/0:29,0:29:84.26:0,84,1380	1/1:1,22:24:57.15:1250,57,0	1/1:0,28:28:84.25:1881,84,0	1/1:1,24:25:75.26:1726,75,0	1/1:1,12:13:30.10:691,30,0
chr10	49891402	.	C	CA	14080.41	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-11.898;DP=509;FS=6.061;HRun=0;HaplotypeScore=45.6698;InbreedingCoeff=0.9994;MQ=81.20;MQ0=0;MQRankSum=-1.269;QD=42.03;ReadPosRankSum=0.701;VQSLOD=5.0651;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,16:16:48.11:737,48,0	1/1:0,10:10:30.10:468,30,0	0/0:16,0:16:38.32:0,38,473	0/0:13,0:13:36.12:0,36,500	1/1:0,31:31:78.19:1168,78,0	0/0:21,0:21:63.21:0,63,880	0/0:15,0:15:45.11:0,45,575	1/1:2,27:29:78.21:1153,78,0	0/0:17,0:17:51.15:0,51,682	1/1:0,19:19:57.16:880,57,0	1/1:1,18:19:45.15:719,45,0	0/0:19,0:19:54.18:0,54,754	0/0:18,0:18:54.18:0,54,754	1/1:1,18:19:51.10:773,51,0	1/1:1,21:22:60.20:956,60,0	1/1:0,17:17:45.15:718,45,0	1/1:0,14:14:36.12:567,36,0	1/1:0,13:13:36.12:575,36,0	1/1:0,12:12:36.11:550,36,0	1/1:2,25:27:75.25:1176,75,0	1/1:0,22:22:54.18:863,54,0	0/0:13,0:13:33.11:0,33,449	0/0:19,0:19:54.18:0,54,748	0/0:23,0:23:69.22:0,69,948	1/1:0,10:10:24.08:384,24,0	1/1:0,17:17:51.17:815,51,0	1/1:1,26:27:66.22:1053,66,0	1/1:0,11:11:33.11:527,33,0
chr10	49895081	.	T	TAA	1842.36	PASS	AB=0.962;AC=36;AF=0.667;AN=54;BaseQRankSum=7.666;DP=285;FS=19.645;HRun=11;HaplotypeScore=72.1847;InbreedingCoeff=0.6894;MQ=53.07;MQ0=17;MQRankSum=-8.190;QD=9.70;ReadPosRankSum=-2.458;VQSLOD=-0.1398;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:8,0:10:15.03:163,15,0	1/1:2,0:3:3:29,3,0	0/1:5,0:3:0:0,0,0	0/0:9,0:8:7.90:0,8,55	1/1:8,0:14:22.20:204,22,0	0/1:11,0:10:6.06:6,0,98	0/0:13,0:12:11.91:0,12,166	1/1:9,4:14:15.05:217,15,0	0/0:8,0:8:18.01:0,18,173	1/1:3,0:4:3:29,3,0	1/1:10,0:14:18.90:176,19,0	0/0:11,0:9:14.97:0,15,145	0/0:13,0:14:25.61:0,26,242	1/1:8,0:7:5.97:49,6,0	1/1:7,0:14:21.03:200,21,0	1/1:6,0:7:11.89:87,12,0	1/1:6,0:6:3:29,3,0	1/1:5,0:7:11.94:106,12,0	1/1:6,2:7:8.99:107,9,0	1/1:9,8:16:29.54:374,30,0	1/1:4,1:4:2.97:20,3,0	0/0:11,0:8:20.98:0,21,194	0/0:8,0:10:23.46:0,23,193	0/0:14,0:15:32.77:0,33,297	1/1:9,0:9:2.97:20,3,0	1/1:9,0:9:2.97:20,3,0	1/1:10,4:11:15.01:194,15,0	./.
chr10	49895103	.	C	CT	4109.20	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=10.351;DP=268;FS=47.491;HRun=1;HaplotypeScore=84.2052;InbreedingCoeff=0.8516;MQ=68.93;MQ0=1;MQRankSum=-10.086;QD=27.76;ReadPosRankSum=2.567;VQSLOD=0.7003;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,14:17:12.04:180,12,0	1/1:0,2:2:3.01:47,3,0	0/0:11,0:6:17.85:0,18,176	0/0:14,0:12:17.75:0,18,267	1/1:2,9:12:15.01:209,15,0	0/0:7,0:7:21.07:0,21,289	0/0:14,0:13:39.13:0,39,541	1/1:5,7:12:27.09:412,27,0	0/0:12,0:12:30.10:0,30,420	1/1:0,4:4:12.04:190,12,0	1/1:2,10:12:24.08:379,24,0	0/0:6,0:6:18.06:0,18,251	0/0:16,0:16:39.05:0,39,537	1/1:0,6:7:12.04:190,12,0	1/1:1,10:11:24.08:380,24,0	1/1:2,8:11:21.07:317,21,0	1/1:1,4:4:6.02:95,6,0	1/1:2,3:5:9.03:142,9,0	1/1:3,5:8:18.06:284,18,0	1/1:2,9:12:32.94:487,33,0	1/1:3,5:8:2.97:47,3,0	0/0:10,0:10:30.09:0,30,398	0/0:14,0:14:36.12:0,36,501	0/0:16,0:16:48.16:0,48,671	1/1:1,3:4:3.01:48,3,0	1/1:0,5:5:15.05:238,15,0	1/1:2,7:9:27.09:417,27,0	1/1:0,4:4:3:47,3,0
chr10	49895109	.	TC	T	880.46	PASS	AB=0.907;AC=40;AF=0.714;AN=56;BaseQRankSum=8.125;DP=289;FS=27.872;HRun=10;HaplotypeScore=91.5797;InbreedingCoeff=0.3605;MQ=69.04;MQ0=1;MQRankSum=-6.248;QD=4.17;ReadPosRankSum=3.578;VQSLOD=0.0673;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:19:5.36:26,5,0	1/1:2,1:3:5.80:39,6,0	0/0:10,1:7:5.97:0,6,46	0/1:16,0:14:13.36:13,0,61	1/1:10,1:11:5.59:26,6,0	0/0:7,0:7:12.03:0,12,129	0/0:14,1:14:3.06:0,3,286	1/1:14,0:14:17.91:107,18,0	0/0:14,0:14:29.99:0,30,299	1/1:4,0:4:11.22:53,11,0	1/1:12,0:12:22.31:103,22,0	0/1:5,1:6:14.01:14,0,79	0/0:14,1:15:0.98:0,1,213	1/1:8,0:7:11.02:49,11,0	1/1:13,0:13:1.90:55,2,0	1/1:12,0:13:12.07:56,12,0	1/1:4,3:6:11.54:77,12,0	1/1:5,0:5:4.78:18,5,0	1/1:7,0:7:15.29:71,15,0	1/1:12,0:12:18.06:100,18,0	1/1:9,0:9:3.17:13,3,0	0/1:9,1:10:10.75:11,0,146	0/0:13,1:14:4.02:0,4,268	0/1:16,3:19:26.96:27,0,383	1/1:4,0:4:2.84:14,3,0	1/1:5,1:6:14.18:78,14,0	1/1:9,0:9:15.86:68,16,0	1/1:4,0:4:5.71:32,6,0
chr10	49895110	.	C	CT	2880.08	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=9.495;DP=291;FS=58.421;HRun=1;HaplotypeScore=86.2259;InbreedingCoeff=0.8714;MQ=69.06;MQ0=1;MQRankSum=-9.334;QD=17.89;ReadPosRankSum=3.628;VQSLOD=0.4518;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,16:20:11.95:121,12,0	1/1:1,2:3:6.01:64,6,0	0/0:12,0:7:17.08:0,17,131	0/0:16,0:14:19.10:0,19,118	1/1:5,6:11:11.92:114,12,0	0/0:8,0:8:22.28:0,22,236	0/0:16,0:14:41.82:0,42,467	1/1:2,11:13:29.99:325,30,0	0/0:14,0:14:35.70:0,36,389	1/1:0,4:4:12.04:157,12,0	1/1:0,11:11:24.08:310,24,0	0/0:6,0:6:17.83:0,18,170	0/0:14,0:14:35.32:0,35,345	1/1:2,6:7:12.04:152,12,0	1/1:1,12:13:23.75:258,24,0	1/1:4,10:14:18:211,18,0	1/1:4,3:6:12.02:128,12,0	1/1:1,5:6:6:69,6,0	1/1:1,6:7:18.06:234,18,0	1/1:1,11:12:32.51:378,33,0	1/1:0,9:9:2.71:38,3,0	0/0:10,0:10:24.12:0,24,291	0/0:14,0:14:38.59:0,39,429	0/0:20,0:20:30.87:0,31,591	1/1:0,3:3:3.01:40,3,0	1/1:3,4:7:17.49:191,17,0	1/1:2,7:9:22.54:245,23,0	1/1:0,4:4:5.95:58,6,0
chr10	49896987	.	AC	A	5793.26	PASS	AB=0.928;AC=54;AF=0.964;AN=56;BaseQRankSum=-4.103;DP=434;FS=3.247;HRun=3;HaplotypeScore=43.5304;InbreedingCoeff=-0.0382;MQ=53.98;MQ0=46;MQRankSum=0.064;QD=13.35;ReadPosRankSum=0.579;VQSLOD=3.4881;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:24:68.23:467,68,0	1/1:6,0:5:14.86:104,15,0	0/1:30,5:8:3.02:110,0,3	0/1:53,1:13:30.76:31,0,62	1/1:12,0:12:35.40:240,35,0	1/1:13,0:12:18.78:138,19,0	1/1:12,0:12:31.49:218,31,0	1/1:19,0:16:27.89:309,28,0	1/1:8,0:7:16.26:111,16,0	1/1:16,0:14:38.76:295,39,0	1/1:9,0:7:20.68:140,21,0	1/1:15,0:15:36.46:293,36,0	1/1:9,0:9:20.66:151,21,0	1/1:15,0:14:38:243,38,0	1/1:15,0:15:41.61:296,42,0	1/1:16,0:15:44.60:322,45,0	1/1:17,0:13:35.63:247,36,0	1/1:14,0:10:23.85:175,24,0	1/1:14,0:14:38.73:280,39,0	1/1:13,0:13:35.41:223,35,0	1/1:13,0:10:23.68:155,24,0	1/1:6,0:6:11.63:80,12,0	1/1:11,0:10:17.86:133,18,0	1/1:9,0:8:11.85:89,12,0	1/1:16,0:16:44.44:298,44,0	1/1:12,0:12:35.76:266,36,0	1/1:20,0:19:49.56:340,50,0	1/1:10,0:3:5.93:39,6,0
chr10	49897344	.	C	CAGGA	5390.36	PASS	AB=0.913;AC=30;AF=0.536;AN=56;BaseQRankSum=13.045;DP=511;FS=15.799;HRun=0;HaplotypeScore=130.0166;InbreedingCoeff=0.4386;MQ=63.42;MQ0=13;MQRankSum=-4.525;QD=18.03;ReadPosRankSum=1.381;VQSLOD=3.6465;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:23:17.59:344,0,18	1/1:3,0:3:8.91:61,9,0	0/0:23,0:17:26.17:0,26,277	0/0:25,0:16:32.36:0,32,360	1/1:4,0:3:8.97:72,9,0	0/0:13,0:13:34.17:0,34,332	0/0:37,0:36:90.86:0,91,1023	1/1:18,0:17:1.28:325,1,0	0/0:23,0:23:68.86:0,69,862	0/1:20,0:20:93.98:190,0,94	1/1:8,1:9:20.94:187,21,0	0/0:27,0:27:77.97:0,78,912	0/0:16,0:16:45.01:0,45,548	0/1:20,2:22:99:306,0,151	1/1:12,5:17:10.11:485,10,0	1/1:19,0:19:15.85:330,16,0	1/1:23,6:28:0.76:641,1,0	0/1:18,5:23:67.89:459,0,68	1/1:15,0:11:2.09:162,2,0	1/1:8,0:8:17.89:134,18,0	1/1:37,2:36:18.91:571,19,0	0/0:9,0:9:14.92:0,15,116	0/0:9,0:7:18.01:0,18,213	0/0:30,0:30:87.04:0,87,1127	1/1:12,1:13:5.67:244,6,0	0/1:10,3:13:14.98:366,0,15	0/1:12,1:13:31.39:207,0,31	1/1:8,2:10:29.84:308,30,0
chr10	49900444	.	T	TG	6054.71	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-0.801;DP=734;FS=1.037;HRun=7;HaplotypeScore=78.4402;InbreedingCoeff=0.9996;MQ=86.79;MQ0=0;MQRankSum=-2.143;QD=28.43;ReadPosRankSum=-0.094;VQSLOD=5.2298;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,39:44:99:1196,99,0	0/0:10,0:10:27.04:0,27,261	0/0:24,0:24:42.05:0,42,403	0/0:31,0:31:75.06:0,75,707	0/0:26,0:26:69.10:0,69,664	0/0:36,0:36:99:0,102,973	0/0:21,0:21:47.36:0,47,462	1/1:9,25:34:72.20:856,72,0	0/0:26,0:26:75.12:0,75,724	0/0:31,0:31:90.14:0,90,868	0/0:24,0:24:60.08:0,60,578	0/0:25,0:25:66.08:0,66,632	0/0:27,0:27:75.11:0,75,720	0/0:31,0:31:93.15:0,93,898	0/0:33,0:33:90.14:0,90,869	1/1:5,23:28:49.25:863,49,0	0/0:27,0:27:54.68:0,55,701	0/0:17,0:17:48.08:0,48,464	1/1:10,16:26:45.14:542,45,0	1/1:2,12:14:33.10:398,33,0	1/1:5,39:44:99:1423,120,0	0/0:24,0:24:57.08:0,57,550	0/0:15,0:15:39.06:0,39,376	0/0:33,0:33:81.08:0,81,773	0/0:19,0:19:57.09:0,57,550	0/0:30,0:30:81.12:0,81,782	1/1:3,20:23:66.18:776,66,0	0/0:10,0:10:27.04:0,27,261
chr10	49901193	.	CTGGTGTTGGTGT	C	3534.86	PASS	AB=0.893;AC=20;AF=0.370;AN=54;BaseQRankSum=2.674;DP=674;FS=15.296;HRun=0;HaplotypeScore=220.1305;InbreedingCoeff=0.6586;MQ=77.86;MQ0=18;MQRankSum=-1.495;QD=17.16;ReadPosRankSum=1.557;VQSLOD=0.9103;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:39,3:41:24.15:719,24,0	0/0:5,0:8:15.04:0,15,186	./.	0/0:53,0:46:1.25:0,1,3	1/1:13,0:13:3.01:99,3,0	0/0:25,0:24:18.06:0,18,809	0/0:38,0:36:39.13:0,39,1317	0/0:26,0:23:0:0,0,0	0/0:20,0:20:33.11:0,33,1517	1/1:17,0:17:6.02:192,6,0	1/1:8,1:9:6.02:202,6,0	0/0:23,0:23:30.10:0,30,1172	0/0:25,0:25:42.08:0,42,1667	1/1:20,3:23:15.05:498,15,0	0/0:16,0:16:12.04:0,12,219	0/1:15,4:19:30.78:432,0,31	1/1:19,3:22:15.05:459,15,0	1/1:14,2:16:9.03:304,9,0	0/0:19,0:18:15.05:0,15,546	0/0:27,0:24:30.09:0,30,775	0/0:45,0:40:24.07:0,24,734	0/0:17,0:15:24.07:0,24,814	0/0:18,0:18:30.06:0,30,1259	0/0:44,0:44:9.99:0,10,2152	1/1:12,0:11:6.01:65,6,0	0/1:23,1:21:63.64:465,0,64	0/0:23,0:23:33.11:0,33,1144	1/1:8,1:9:3.01:99,3,0
chr10	49901283	.	GT	G	6393.70	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=10.404;DP=608;FS=12.970;HRun=9;HaplotypeScore=77.5428;InbreedingCoeff=0.9799;MQ=79.75;MQ0=2;MQRankSum=-2.457;QD=22.83;ReadPosRankSum=5.586;VQSLOD=4.4229;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,44:47:99:1136,126,0	1/1:0,7:7:21.01:192,21,0	0/0:40,0:33:47.95:0,48,530	0/0:42,1:32:12.73:0,13,415	1/1:2,28:30:78.03:713,78,0	0/0:22,0:22:60.14:0,60,663	0/0:27,0:27:63.15:0,63,697	0/0:19,0:18:33.09:0,33,373	0/0:23,0:24:59.99:0,60,655	1/1:2,19:21:57.01:516,57,0	1/1:1,16:17:45.01:412,45,0	0/0:13,0:13:36.10:0,36,407	0/0:18,0:18:28.28:0,28,531	1/1:1,14:15:39.02:357,39,0	1/1:4,22:26:59.88:538,60,0	1/1:2,20:22:54.03:494,54,0	1/1:5,24:29:66.03:604,66,0	1/1:2,16:18:41.06:363,41,0	0/0:15,0:15:42.12:0,42,476	0/0:13,0:13:39.01:0,39,432	0/0:14,1:15:5.68:0,6,319	0/0:20,0:20:48.13:0,48,546	0/0:11,0:11:27.08:0,27,310	0/0:31,0:30:84.22:0,84,950	1/1:2,18:20:48.01:439,48,0	1/1:4,15:19:45.01:411,45,0	0/0:15,0:15:39.08:0,39,428	1/1:0,9:9:24.01:219,24,0
chr10	49901655	.	TG	T	8814.55	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=14.511;DP=703;FS=3.812;HRun=7;HaplotypeScore=69.2695;InbreedingCoeff=0.9986;MQ=84.90;MQ0=0;MQRankSum=0.968;QD=26.31;ReadPosRankSum=4.915;VQSLOD=5.4898;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,49:54:99:1439,141,0	1/1:0,7:7:18.04:184,18,0	0/0:25,0:25:59.88:0,60,685	0/0:18,0:18:42.08:0,42,491	1/1:4,26:30:69.15:704,69,0	0/0:25,0:25:72.21:0,72,892	0/0:24,0:24:63.20:0,63,792	0/0:35,0:35:81.24:0,81,987	0/0:26,0:26:78.25:0,78,981	1/1:3,30:33:87.20:887,87,0	1/1:4,18:22:45.10:459,45,0	0/0:13,0:13:36.11:0,36,442	0/0:32,0:32:81.25:0,81,1006	1/1:1,26:27:78.18:796,78,0	1/1:2,29:31:84.19:857,84,0	1/1:1,23:24:63.14:643,63,0	1/1:2,28:30:84.19:857,84,0	1/1:2,15:17:42.09:428,42,0	0/0:24,0:24:54.15:0,54,665	0/0:22,0:22:57.17:0,57,704	0/0:29,0:29:78.23:0,78,964	0/0:19,0:19:57.18:0,57,710	0/0:18,0:18:54.17:0,54,676	0/0:28,0:28:81.26:0,81,1019	1/1:3,22:25:63.14:642,63,0	1/1:3,22:25:66.15:673,66,0	0/0:30,0:30:78.22:0,78,952	1/1:1,9:10:24.05:245,24,0
chr10	49901891	.	A	AG	7888.14	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-12.390;DP=646;FS=5.461;HRun=8;HaplotypeScore=62.7455;InbreedingCoeff=0.9965;MQ=75.14;MQ0=0;MQRankSum=-5.462;QD=25.78;ReadPosRankSum=2.505;VQSLOD=5.8119;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,20:27:54.16:623,54,0	1/1:1,6:7:15.04:173,15,0	0/0:14,0:13:19.41:0,19,152	0/0:16,0:15:23.25:0,23,189	1/1:6,32:38:84.21:954,84,0	0/0:22,0:22:54.01:0,54,494	0/0:21,0:21:54.03:0,54,494	0/0:25,0:26:57:0,57,518	0/0:36,0:36:99:0,99,901	1/1:10,30:40:84.25:963,84,0	1/1:1,19:20:54.15:616,54,0	0/0:25,0:25:68.99:0,69,618	0/0:25,0:25:57.02:0,57,522	1/1:3,18:21:48.14:552,48,0	1/1:1,20:21:60.18:692,60,0	1/1:3,22:25:32.71:630,33,0	1/1:5,21:26:57.17:658,57,0	1/1:5,14:19:42.12:485,42,0	0/0:16,0:16:36.01:0,36,329	0/0:20,0:20:51.01:0,51,467	0/0:22,0:22:54.02:0,54,494	0/0:17,0:17:42.01:0,42,380	0/0:21,0:21:56.71:0,57,505	0/0:37,0:37:93.02:0,93,845	1/1:5,19:24:51.10:573,51,0	1/1:6,19:25:54.16:622,54,0	0/0:22,0:22:60.02:0,60,549	1/1:0,13:13:30.09:346,30,0
chr10	49904940	.	CT	C	10873.04	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=13.067;DP=675;FS=0.000;HRun=8;HaplotypeScore=96.7239;InbreedingCoeff=0.9990;MQ=79.97;MQ0=0;MQRankSum=-2.227;QD=23.90;ReadPosRankSum=2.578;VQSLOD=5.0855;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,49:52:99:1216,126,0	1/1:2,7:9:21.03:203,21,0	0/0:24,0:24:53.20:0,53,568	0/0:14,0:13:24.61:0,25,259	1/1:3,22:25:57.07:550,57,0	0/0:28,0:28:81.22:0,81,953	0/0:26,0:26:72.22:0,72,870	1/1:2,23:25:66.07:625,66,0	0/0:19,0:19:51.14:0,51,604	1/1:2,17:19:48.07:463,48,0	1/1:4,20:24:60.08:575,60,0	0/0:26,0:26:69:0,69,810	0/0:25,0:25:69.17:0,69,807	1/1:2,29:31:87.14:840,87,0	1/1:1,20:21:54.09:521,54,0	1/1:3,23:26:65.14:614,65,0	1/1:4,27:31:78.12:753,78,0	1/1:2,29:31:84.13:810,84,0	1/1:2,11:13:33.05:319,33,0	1/1:4,23:27:60.08:579,60,0	1/1:3,27:30:78.12:753,78,0	0/0:17,0:17:48.15:0,48,580	0/0:17,0:17:45.10:0,45,519	0/0:22,1:23:31.21:0,31,659	1/1:0,23:23:54.09:521,54,0	1/1:2,22:24:60.07:574,60,0	1/1:3,22:25:60.09:579,60,0	1/1:5,14:19:39.06:376,39,0
chr10	49905014	.	GCTCTCTCTCTCTCTCTCTCTCT	G	9846.83	PASS	AB=0.866;AC=30;AF=0.556;AN=54;BaseQRankSum=9.295;DP=608;FS=1.331;HRun=0;HaplotypeScore=334.5676;InbreedingCoeff=0.7071;MQ=68.48;MQ0=22;MQRankSum=-6.583;QD=30.30;ReadPosRankSum=1.176;VQSLOD=2.4912;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:32,2:31:9.01:340,9,0	1/1:6,0:6:3.01:154,3,0	0/0:30,0:18:4.57:0,5,130	0/0:29,0:15:4.26:0,4,107	1/1:15,4:19:15.05:527,15,0	0/0:32,0:29:30.09:0,30,1641	0/0:17,0:20:38.62:0,39,1954	0/0:28,0:27:12.04:0,12,144	0/0:18,0:21:36.12:0,36,2550	1/1:18,3:21:12.03:604,12,0	1/1:14,2:16:9.03:393,9,0	0/0:9,0:11:9.50:0,10,570	0/0:9,0:15:18.06:0,18,1116	1/1:17,12:29:45.09:1991,45,0	1/1:23,0:29:27.08:1011,27,0	1/1:13,3:17:15.05:760,15,0	1/1:23,2:25:9.03:387,9,0	1/1:14,3:17:9.03:493,9,0	0/1:15,2:18:92.04:452,0,92	1/1:16,0:19:15.02:398,15,0	./.	0/0:23,0:23:24.07:0,24,1587	0/0:18,0:19:9.02:0,9,581	0/0:22,0:36:30.57:0,31,1678	1/1:15,5:19:14.77:838,15,0	1/1:13,3:14:18.06:695,18,0	0/1:18,0:20:99:304,0,221	1/1:13,2:15:9.03:501,9,0
chr10	49905795	.	G	GCATGGTC	18345.95	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-6.023;DP=753;FS=0.327;HRun=0;HaplotypeScore=182.2421;InbreedingCoeff=0.9992;MQ=80.99;MQ0=0;MQRankSum=-17.209;QD=79.76;ReadPosRankSum=-1.958;VQSLOD=4.8842;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:13,27:59:96.29:3434,96,0	0/0:7,0:7:21.07:0,21,543	0/0:26,0:26:57.39:0,57,1224	0/0:22,0:22:57.11:0,57,1184	0/0:19,0:19:57.20:0,57,1441	0/0:25,0:25:72.25:0,72,1843	0/0:41,0:41:99:0,120,2541	1/1:11,12:34:96.33:3689,96,0	0/0:41,0:41:99:0,120,3109	0/0:24,0:24:69.24:0,69,1791	0/0:16,0:16:42.13:0,42,1038	0/0:31,0:31:90.29:0,90,2256	0/0:43,0:43:99:0,129,3120	0/0:37,0:37:99:0,102,2555	0/0:35,0:35:99:0,102,2585	1/1:3,28:36:81.28:3226,81,0	0/0:26,0:26:69.20:0,69,1682	0/0:19,0:19:48.13:0,48,1138	1/1:4,7:20:60.15:1920,60,0	1/1:2,19:27:63.17:2269,63,0	1/1:6,12:28:39.08:1552,39,0	0/0:21,0:21:63.22:0,63,1627	0/0:14,0:14:41.88:0,42,1024	0/0:20,0:20:57.11:0,57,1233	0/0:15,0:15:39.09:0,39,952	0/0:26,0:26:75.26:0,75,1919	1/1:3,18:25:60.18:2256,60,0	0/0:15,0:15:45.15:0,45,1168
chr10	49907878	.	T	TG	3846.14	PASS	AC=52;AF=1.000;AN=52;DP=240;FS=0.000;HRun=1;HaplotypeScore=145.0938;InbreedingCoeff=0.2431;MQ=29.63;MQ0=37;QD=16.72;VQSLOD=3.6812;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,2:8:15.30:105,15,0	1/1:0,4:4:11.99:106,12,0	./.	./.	1/1:5,5:7:17.84:142,18,0	1/1:2,7:8:17.94:141,18,0	1/1:4,4:8:14.92:119,15,0	1/1:11,1:2:3.11:8,3,0	1/1:4,8:11:29.99:279,30,0	1/1:6,3:9:21.01:164,21,0	1/1:3,5:6:17.73:136,18,0	1/1:3,8:10:26.92:224,27,0	1/1:4,5:7:20.86:180,21,0	1/1:6,3:7:11.89:118,12,0	1/1:3,4:6:17.67:129,18,0	1/1:3,6:8:20.98:194,21,0	1/1:8,7:14:33.03:262,33,0	1/1:4,7:11:26.57:256,27,0	1/1:5,0:1:1.25:3,1,0	1/1:3,6:8:20.77:150,21,0	1/1:4,1:3:2.94:18,3,0	1/1:2,4:7:20.84:185,21,0	1/1:3,4:6:17.88:135,18,0	1/1:1,3:3:3:25,3,0	1/1:8,9:12:30.19:249,30,0	1/1:3,9:8:24:235,24,0	1/1:4,4:8:20.87:179,21,0	1/1:3,0:3:9.01:105,9,0
chr10	49907882	.	C	CACCCCTCCT	16399.09	PASS	AB=0.786;AC=48;AF=0.960;AN=50;BaseQRankSum=3.397;DP=214;FS=0.000;HRun=0;HaplotypeScore=125.0738;InbreedingCoeff=0.1846;MQ=27.03;MQ0=39;MQRankSum=-0.228;QD=81.59;ReadPosRankSum=3.323;VQSLOD=4.8984;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,2:6:14.30:312,14,0	1/1:0,4:4:12.04:524,12,0	./.	./.	1/1:5,4:7:15.05:630,15,0	1/1:2,7:7:21.07:858,21,0	1/1:5,3:8:9.48:651,9,0	1/1:10,1:2:6.02:265,6,0	1/1:3,8:10:27.09:1133,27,0	1/1:5,3:8:19.68:779,20,0	1/1:3,3:6:12.04:508,12,0	1/1:4,7:9:27.09:1156,27,0	1/1:4,5:6:14.10:642,14,0	1/1:5,3:6:15.05:646,15,0	1/1:4,4:6:15.41:532,15,0	1/1:2,5:7:18.06:785,18,0	1/1:5,7:11:28.65:1140,29,0	1/1:4,7:11:30.03:1123,30,0	1/1:4,0:1:3.01:133,3,0	1/1:3,5:8:18.06:786,18,0	./.	1/1:1,4:5:14.72:516,15,0	1/1:2,4:5:12.04:518,12,0	0/1:1,3:3:5.27:125,0,5	1/1:5,7:10:20.63:1128,21,0	1/1:3,6:6:18.06:770,18,0	1/1:3,4:7:18.06:740,18,0	0/1:2,0:2:0:0,0,0
chr10	49908037	.	AT	A	1875.56	PASS	AC=42;AF=1.000;AN=42;BaseQRankSum=1.742;DP=270;FS=0.000;HRun=1;HaplotypeScore=58.2446;InbreedingCoeff=0.0308;MQ=17.30;MQ0=171;MQRankSum=-1.260;QD=8.45;ReadPosRankSum=-0.156;VQSLOD=0.6028;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	1/1:1,2:2:6:51,6,0	./.	./.	1/1:12,14:17:28.91:217,29,0	1/1:7,6:5:15:128,15,0	1/1:4,1:1:2.97:20,3,0	./.	1/1:4,3:3:8.97:72,9,0	1/1:9,5:4:12.02:128,12,0	1/1:8,5:7:12.92:118,13,0	1/1:5,4:4:11.97:98,12,0	1/1:5,2:2:5.98:47,6,0	1/1:7,1:1:2.99:24,3,0	1/1:6,3:3:9:77,9,0	1/1:5,1:1:2.98:22,3,0	1/1:11,1:1:3:26,3,0	1/1:4,2:2:6:56,6,0	./.	1/1:10,9:12:32.44:253,32,0	./.	1/1:3,1:2:4.55:30,5,0	1/1:6,6:7:19.52:153,20,0	./.	1/1:5,9:10:23.81:204,24,0	1/1:13,6:8:18.48:168,18,0	1/1:5,2:3:7.56:57,8,0	1/1:9,0:1:1.55:4,2,0
chr10	49908038	.	T	TA	1163.28	PASS	AC=40;AF=1.000;AN=40;BaseQRankSum=1.877;DP=271;FS=0.000;HRun=3;HaplotypeScore=61.6443;InbreedingCoeff=0.0484;MQ=17.26;MQ0=172;MQRankSum=0.741;QD=5.34;ReadPosRankSum=2.371;VQSLOD=0.4841;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	1/1:3,0:2:5.36:22,5,0	./.	./.	1/1:23,3:17:25.66:151,26,0	1/1:13,0:5:13.39:55,13,0	./.	./.	1/1:7,0:3:5.27:21,5,0	1/1:14,0:4:4.46:25,4,0	1/1:11,2:7:19.76:146,20,0	1/1:9,0:4:7.95:32,8,0	1/1:7,0:2:2.68:11,3,0	1/1:8,0:1:2.74:12,3,0	1/1:9,0:3:7.87:31,8,0	1/1:6,0:1:2.37:8,2,0	1/1:12,0:1:2.50:9,2,0	1/1:6,0:2:5.62:27,6,0	./.	1/1:16,2:12:30.48:186,30,0	./.	1/1:3,1:2:5.61:50,6,0	1/1:11,1:7:16.16:92,16,0	./.	1/1:14,1:10:24.49:126,24,0	1/1:18,2:8:19.21:132,19,0	1/1:6,1:3:8.35:62,8,0	1/1:8,1:1:3.01:39,3,0
chr10	49908040	.	AAT	A	1662.35	PASS	AC=40;AF=1.000;AN=40;BaseQRankSum=3.709;DP=272;FS=0.000;HRun=0;HaplotypeScore=61.1258;InbreedingCoeff=0.0342;MQ=17.14;MQ0=174;MQRankSum=-0.063;QD=7.59;ReadPosRankSum=1.027;VQSLOD=3.0280;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	1/1:1,2:2:6:54,6,0	./.	./.	1/1:14,12:17:16.10:182,16,0	1/1:7,6:5:15.01:135,15,0	./.	./.	1/1:5,2:3:6:55,6,0	1/1:11,3:4:6:55,6,0	1/1:9,5:7:9.54:118,10,0	1/1:6,3:4:9:81,9,0	1/1:7,1:2:3:27,3,0	1/1:7,1:1:3:26,3,0	1/1:6,3:3:9:81,9,0	1/1:5,1:1:2.98:21,3,0	1/1:11,1:1:3:28,3,0	1/1:4,2:2:6.01:58,6,0	./.	1/1:8,9:11:27.95:242,28,0	./.	1/1:4,1:2:3.89:29,4,0	1/1:6,5:7:15.90:137,16,0	./.	1/1:7,8:10:23.03:213,23,0	1/1:15,5:8:13.86:134,14,0	1/1:5,2:3:6.89:58,7,0	1/1:9,0:1:0.89:2,1,0
chr10	49910192	.	AG	A	1527.55	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.442;DP=647;FS=3.564;HRun=1;HaplotypeScore=63.0421;InbreedingCoeff=0.9912;MQ=81.33;MQ0=0;MQRankSum=-4.972;QD=35.52;ReadPosRankSum=1.858;VQSLOD=3.8978;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,25:26:75.08:1020,75,0	0/0:5,0:5:15.05:0,15,230	0/0:24,0:24:55.41:0,55,913	0/0:26,0:25:41.43:0,41,745	0/0:31,0:31:93.30:0,93,1399	0/0:33,0:33:99:0,99,1357	0/0:29,0:29:87.26:0,87,1286	0/0:19,0:19:57.17:0,57,833	0/0:20,0:20:60.15:0,60,832	0/0:33,0:33:99:0,99,1512	0/0:25,0:25:75.16:0,75,1092	0/0:11,0:11:33.11:0,33,500	0/0:23,0:23:69.21:0,69,1010	0/0:26,0:26:78.21:0,78,1132	0/0:25,0:25:75.24:0,75,1126	1/1:0,17:17:45.15:629,45,0	0/0:22,0:22:66.18:0,66,964	0/0:17,0:17:48.15:0,48,712	0/0:25,0:25:75.20:0,75,1029	0/0:22,0:22:66.22:0,66,1007	0/0:29,0:29:87.26:0,87,1283	0/0:25,0:25:60.91:0,61,1087	0/0:27,0:27:81.23:0,81,1185	0/0:15,0:15:45.15:0,45,676	0/0:28,0:28:84.27:0,84,1254	0/0:30,0:30:90.31:0,90,1377	0/0:25,0:25:75.23:0,75,1099	0/0:9,0:9:27.09:0,27,407
chr10	49911227	.	G	GTT	1031.14	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-4.335;DP=530;FS=3.716;HRun=7;HaplotypeScore=65.7266;InbreedingCoeff=0.9949;MQ=72.36;MQ0=2;MQRankSum=-1.950;QD=35.56;ReadPosRankSum=0.719;VQSLOD=3.5522;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:34:79.96:0,80,1073	1/1:0,12:11:27.05:414,27,0	0/0:18,0:17:40.60:0,41,420	0/0:15,0:15:23.02:0,23,222	0/0:20,0:20:60.18:0,60,698	0/0:17,0:17:48.14:0,48,558	0/0:11,0:11:30.08:0,30,349	0/0:33,0:33:84.21:0,84,958	0/0:16,0:16:45.13:0,45,524	0/0:29,0:29:69.17:0,69,787	0/0:36,0:36:99:0,99,1133	0/0:9,0:9:27.08:0,27,315	0/0:16,0:16:42.12:0,42,489	0/0:18,0:18:54.10:0,54,594	1/1:1,16:17:45.15:739,45,0	0/0:18,0:18:54.15:0,54,619	0/0:17,0:17:45.06:0,45,506	0/0:15,0:14:36.09:0,36,419	0/0:24,0:24:38.31:0,38,624	0/0:16,0:16:45.01:0,45,514	0/0:17,0:17:51.15:0,51,594	0/0:13,0:13:33.10:0,33,384	0/0:19,0:19:51.14:0,51,594	0/0:16,0:16:48.14:0,48,559	0/0:24,0:23:66.18:0,66,758	0/0:20,0:20:51.14:0,51,594	0/0:21,0:21:57.14:0,57,653	0/0:9,0:9:21:0,21,217
chr10	49911726	.	AC	A	1206.05	PASS	AB=0.892;AC=12;AF=0.222;AN=54;BaseQRankSum=0.458;DP=410;FS=0.000;HRun=10;HaplotypeScore=48.0302;InbreedingCoeff=0.4705;MQ=58.63;MQ0=3;MQRankSum=1.452;QD=7.63;ReadPosRankSum=5.312;VQSLOD=0.6867;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,18:28:49.05:402,49,0	1/1:0,10:10:26.99:234,27,0	0/1:17,1:12:5.17:5,0,135	0/0:14,0:7:11.82:0,12,108	0/0:1,0:6:8.77:0,9,51	0/0:17,1:18:13.09:0,13,372	0/1:22,2:24:7.02:7,0,369	0/0:6,0:20:38.34:0,38,270	0/1:19,2:21:10.02:10,0,345	0/0:4,0:7:5.95:0,6,41	./.	0/0:14,0:14:33.36:0,33,327	0/0:10,0:10:21.03:0,21,214	0/0:4,0:10:6.15:0,6,29	1/1:3,14:17:41.98:362,42,0	1/1:2,17:19:38.99:339,39,0	0/0:1,0:18:5.72:0,6,29	0/0:8,0:9:5.91:0,6,38	0/0:11,0:14:14.98:0,15,137	0/0:15,0:16:20.80:0,21,174	0/0:3,0:11:11.52:0,12,67	0/0:15,0:15:36.08:0,36,389	0/0:12,3:15:0.93:0,1,207	0/1:16,3:19:10.05:10,0,328	0/0:11,0:11:11.76:0,12,72	0/0:8,0:9:8.70:0,9,56	0/0:9,0:21:20.24:0,20,130	0/0:4,0:5:9.63:0,10,56
chr10	49911989	.	T	TACAC	2510.74	PASS	AB=0.833;AC=30;AF=0.577;AN=52;BaseQRankSum=-0.991;DP=535;FS=0.000;HRun=0;HaplotypeScore=116.5928;InbreedingCoeff=0.6642;MQ=70.56;MQ0=12;MQRankSum=-1.552;QD=8.75;ReadPosRankSum=-2.551;VQSLOD=2.0635;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:33:15:0,15,134	1/1:2,5:9:12.04:282,12,0	./.	./.	1/1:17,0:16:5.99:116,6,0	0/0:22,0:22:27.07:0,27,377	0/1:26,0:27:22.90:23,0,431	1/1:27,0:27:11.95:137,12,0	0/0:14,0:14:15.05:0,15,225	1/1:16,0:16:12.48:174,12,0	0/0:16,1:20:0.47:0,0,1	0/0:12,0:12:15.03:0,15,209	0/0:13,0:13:8.82:0,9,106	1/1:14,0:14:15.48:223,15,0	1/1:11,5:21:12.03:220,12,0	0/0:2,0:18:33.04:0,33,307	1/1:14,7:25:12.04:252,12,0	1/1:9,1:11:6.01:80,6,0	1/1:10,0:10:6.01:97,6,0	1/1:9,5:16:11.74:221,12,0	0/1:14,10:28:32.89:200,0,33	0/0:17,0:17:15.02:0,15,204	0/0:7,0:8:9.02:0,9,121	0/0:24,0:23:30.05:0,30,399	1/1:14,2:20:5.84:105,6,0	1/1:16,0:19:24.04:397,24,0	1/1:22,0:22:5.64:85,6,0	1/1:3,0:2:6:92,6,0
chr10	49912730	.	CCACA	C	1410.49	PASS	AB=0.957;AC=40;AF=0.909;AN=44;BaseQRankSum=-0.646;DP=577;FS=2.755;HRun=0;HaplotypeScore=101.7673;InbreedingCoeff=0.1078;MQ=71.58;MQ0=18;MQRankSum=0.313;QD=3.38;ReadPosRankSum=1.063;VQSLOD=1.9543;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:40,0:38:2.51:8,3,0	1/1:9,0:10:3:28,3,0	./.	./.	0/1:16,0:16:0.01:0,0,0	1/1:15,0:16:8.69:67,9,0	0/1:19,0:24:4.78:20,0,5	./.	1/1:8,0:11:5.88:43,6,0	./.	1/1:7,0:7:3.01:45,3,0	0/1:17,0:17:29.01:106,0,29	1/1:8,0:8:6.01:73,6,0	1/1:12,4:15:15.01:202,15,0	0/1:16,0:14:0:0,0,0	1/1:7,0:11:9.01:84,9,0	1/1:18,4:22:6.02:91,6,0	1/1:16,6:21:6.49:92,6,0	./.	1/1:17,0:17:0.47:1,0,0	1/1:32,0:31:4.81:30,5,0	1/1:12,2:14:6.02:91,6,0	1/1:15,0:15:3:27,3,0	1/1:42,9:48:27.09:410,27,0	1/1:17,0:17:0.47:1,0,0	1/1:19,0:19:1.29:24,1,0	1/1:10,0:15:6.79:58,7,0	./.
chr10	49913455	.	TTG	T	519.83	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.554;DP=706;FS=4.248;HRun=0;HaplotypeScore=92.7189;InbreedingCoeff=0.9983;MQ=84.16;MQ0=0;MQRankSum=-7.864;QD=13.00;ReadPosRankSum=0.900;VQSLOD=3.3704;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:99:0,99,1775	1/1:4,8:12:23.79:170,24,0	0/0:18,0:18:37.49:0,37,672	0/0:27,0:27:61.64:0,62,889	0/0:33,0:33:99:0,99,1662	0/0:14,0:14:42.14:0,42,776	0/0:24,0:24:69.17:0,69,1151	0/0:37,0:37:99:0,102,1848	0/0:23,0:23:69.24:0,69,1275	0/0:26,0:26:72.24:0,72,1302	0/0:32,0:32:93.29:0,93,1645	0/0:27,0:27:78.27:0,78,1442	0/0:21,0:21:54.17:0,54,966	0/0:23,0:23:69.20:0,69,1202	1/1:7,20:28:64.97:471,65,0	0/0:28,0:28:84.27:0,84,1521	0/0:32,0:31:93.30:0,93,1686	0/0:17,0:17:51.14:0,51,895	0/0:19,0:19:54.17:0,54,947	0/0:33,0:33:93.27:0,93,1654	0/0:23,0:23:63.20:0,63,1112	0/0:32,0:32:93.28:0,93,1619	0/0:22,0:22:63.19:0,63,1128	0/0:22,0:22:66.23:0,66,1208	0/0:28,0:28:84.23:0,84,1428	0/0:35,0:35:96.32:0,96,1724	0/0:28,0:27:78.23:0,78,1373	0/0:9,0:9:27.09:0,27,499
chr10	49913461	.	A	ATCC	1857.95	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=10.271;DP=691;FS=0.000;HRun=0;HaplotypeScore=105.5563;InbreedingCoeff=0.9987;MQ=83.88;MQ0=0;MQRankSum=-10.441;QD=45.32;ReadPosRankSum=-0.325;VQSLOD=5.0147;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:93.32:0,93,1727	1/1:2,8:10:30.10:541,30,0	0/0:19,0:19:57.19:0,57,1017	0/0:24,0:24:69.24:0,69,1231	0/0:34,0:34:99:0,102,1893	0/0:16,0:16:48.14:0,48,832	0/0:23,0:23:69.24:0,69,1286	0/0:36,0:36:99:0,108,1973	0/0:23,0:23:69.19:0,69,1221	0/0:24,0:24:72.25:0,72,1343	0/0:30,0:30:90.31:0,90,1669	0/0:27,0:27:81.27:0,81,1464	0/0:20,0:20:57.18:0,57,1022	0/0:23,0:23:69.24:0,69,1280	1/1:11,20:31:87.25:1438,87,0	0/0:30,0:30:90.30:0,90,1634	0/0:32,0:31:96.33:0,96,1773	0/0:16,0:16:48.15:0,48,851	0/0:22,0:22:63.21:0,63,1137	0/0:30,0:30:90.28:0,90,1644	0/0:23,0:23:66.23:0,66,1222	0/0:31,0:31:93.30:0,93,1676	0/0:18,0:18:51.16:0,51,898	0/0:23,0:23:69.19:0,69,1245	0/0:26,0:26:78.27:0,78,1419	0/0:33,0:33:99:0,99,1786	0/0:28,0:27:84.21:0,84,1450	0/0:8,0:8:24.08:0,24,447
chr10	49914832	.	TG	T	13358.84	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=13.317;DP=932;FS=18.802;HRun=4;HaplotypeScore=92.5693;InbreedingCoeff=0.9958;MQ=86.51;MQ0=0;MQRankSum=-1.923;QD=31.14;ReadPosRankSum=0.877;VQSLOD=3.0973;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:62,0:62:99:0,181,2499	0/0:18,0:18:51.17:0,51,714	0/0:28,0:28:78.23:0,78,1059	0/0:33,0:33:87.11:0,87,1150	1/1:0,37:37:96.29:1152,96,0	0/0:35,0:35:99:0,102,1377	0/0:35,0:35:99:0,102,1407	1/1:1,41:42:99:1439,123,0	0/0:38,0:38:99:0,108,1494	1/1:1,29:30:84.26:1008,84,0	1/1:2,17:19:33.10:396,33,0	0/0:42,0:42:99:0,120,1679	0/0:26,0:26:75.25:0,75,1050	1/1:3,42:45:75.35:1326,75,0	0/0:41,0:41:99:0,117,1637	0/0:50,0:50:99:0,147,2046	1/1:1,29:30:81.25:972,81,0	1/1:2,24:26:72.22:864,72,0	1/1:5,26:31:75.19:875,75,0	1/1:2,30:32:81.25:972,81,0	1/1:1,46:47:99:1584,132,0	0/0:28,0:28:81.26:0,81,1116	0/0:21,0:21:63.17:0,63,858	0/0:46,0:46:99:0,138,1905	1/1:3,17:20:48.15:576,48,0	1/1:2,34:36:99:1224,102,0	1/1:4,26:30:69.21:828,69,0	1/1:0,4:4:12.04:144,12,0
chr10	49914954	.	TG	T	2016.04	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.234;DP=761;FS=2.498;HRun=2;HaplotypeScore=74.3826;InbreedingCoeff=0.9466;MQ=64.49;MQ0=3;MQRankSum=1.898;QD=32.52;ReadPosRankSum=2.460;VQSLOD=3.6679;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,30:32:87.28:1125,87,0	0/0:7,0:7:21.07:0,21,314	0/0:35,0:28:84.28:0,84,1230	0/0:25,0:19:51.05:0,51,700	0/0:31,0:31:87.26:0,87,1260	0/0:34,0:34:93.32:0,93,1393	0/0:33,0:33:99:0,99,1457	0/0:36,0:36:99:0,105,1502	0/0:33,0:33:99:0,99,1420	0/0:28,0:28:75.24:0,75,1104	0/0:14,0:14:39.12:0,39,559	0/0:36,0:36:99:0,108,1596	0/0:26,0:26:78.22:0,78,1110	0/0:31,0:31:93.30:0,93,1369	0/0:43,0:43:99:0,126,1884	1/1:0,30:30:78.25:1013,78,0	0/0:23,0:23:69.20:0,69,987	0/0:16,0:16:48.16:0,48,719	0/0:26,0:24:72.24:0,72,1060	0/0:24,0:24:66.21:0,66,965	0/0:34,0:34:99:0,99,1464	0/0:25,0:25:69.21:0,69,993	0/0:17,0:17:51.17:0,51,754	0/0:38,0:38:99:0,114,1672	0/0:20,0:20:60.20:0,60,896	0/0:31,0:31:80.64:0,81,1172	0/0:31,0:31:90.29:0,90,1322	0/0:2,0:2:6.02:0,6,90
chr10	49915064	.	T	TC	5846.55	PASS	AB=0.585;AC=34;AF=0.607;AN=56;BaseQRankSum=-5.571;DP=558;FS=3.247;HRun=9;HaplotypeScore=71.4198;InbreedingCoeff=0.8512;MQ=81.32;MQ0=0;MQRankSum=-0.129;QD=17.20;ReadPosRankSum=0.823;VQSLOD=5.1011;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:8,18:26:26.97:411,0,27	1/1:2,10:12:11.97:117,12,0	0/0:23,0:21:39.88:0,40,307	0/0:22,0:20:29.38:0,29,204	0/1:6,16:22:4.04:390,0,4	0/0:26,0:26:59.95:0,60,517	0/0:26,0:26:65.91:0,66,557	1/1:9,0:20:15.67:166,16,0	0/0:20,0:20:53.99:0,54,468	1/1:5,12:17:30.08:332,30,0	1/1:2,7:9:18.05:199,18,0	0/0:26,0:26:59.93:0,60,510	0/0:23,0:23:62.94:0,63,538	1/1:6,16:22:13.06:372,13,0	1/1:4,33:37:58.21:870,58,0	1/1:4,3:17:29.07:207,29,0	1/1:3,26:30:38.12:578,38,0	1/1:4,18:22:45.12:495,45,0	1/1:5,0:18:31.90:198,32,0	1/1:5,0:8:14.55:113,15,0	1/1:5,3:18:20.06:145,20,0	0/0:12,0:12:29.48:0,29,228	0/0:13,0:13:19.05:0,19,223	0/0:26,0:26:68.62:0,69,574	1/1:2,14:17:32.96:347,33,0	1/1:4,19:24:56.71:570,57,0	1/1:3,1:15:31.63:203,32,0	1/1:1,5:6:12.03:133,12,0
chr10	49915256	.	T	TTTC	1249.84	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-4.263;DP=496;FS=1.630;HRun=0;HaplotypeScore=80.8700;InbreedingCoeff=0.9055;MQ=64.43;MQ0=1;MQRankSum=1.249;QD=39.06;ReadPosRankSum=1.640;VQSLOD=4.7092;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:64.70:0,65,1196	1/1:0,6:6:8.99:148,9,0	0/0:18,0:8:15.05:0,15,225	0/0:18,0:12:6.07:0,6,243	0/0:33,0:33:78.24:0,78,1132	0/0:14,0:14:39.13:0,39,596	0/0:18,0:18:54.16:0,54,768	0/0:23,0:23:45.11:0,45,662	0/0:12,0:12:27.08:0,27,392	0/0:11,0:11:27.07:0,27,374	0/0:13,0:13:36.12:0,36,547	0/0:18,0:18:42.13:0,42,615	0/0:21,0:21:63.15:0,63,926	0/0:24,0:24:69.23:0,69,1052	1/1:1,24:26:57.20:1216,57,0	0/0:15,0:15:36.12:0,36,552	0/0:18,0:18:42.14:0,42,630	0/0:23,0:23:60.13:0,60,869	0/0:20,0:19:51.16:0,51,755	0/0:21,0:21:57.18:0,57,840	0/0:14,0:14:39.11:0,39,554	0/0:11,0:11:30.10:0,30,455	0/0:13,0:13:39.06:0,39,549	0/0:15,0:15:42.11:0,42,600	0/0:23,0:23:60.19:0,60,891	0/0:13,0:13:36.11:0,36,514	0/0:16,0:15:45.15:0,45,674	0/0:6,0:6:18.06:0,18,268
chr10	49916005	.	GA	G	592.68	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.300;DP=582;FS=7.821;HRun=9;HaplotypeScore=57.0834;InbreedingCoeff=0.9900;MQ=78.16;MQ0=0;MQRankSum=-0.577;QD=19.12;ReadPosRankSum=-0.387;VQSLOD=3.5001;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:75.22:0,75,865	1/1:0,9:9:24.01:220,24,0	0/0:18,0:17:29.90:0,30,303	0/0:19,0:19:31.85:0,32,334	0/0:18,0:18:48.14:0,48,550	0/0:17,0:17:48.14:0,48,554	0/0:24,0:24:66.18:0,66,751	0/0:28,0:27:75.22:0,75,866	0/0:20,0:20:54.11:0,54,608	0/0:26,0:26:69.20:0,69,789	0/0:19,0:19:51.14:0,51,578	0/0:26,0:26:75.22:0,75,866	0/0:28,0:28:75.22:0,75,865	0/0:22,0:22:63.19:0,63,727	1/1:2,20:22:54.03:494,54,0	0/0:27,0:27:69.21:0,69,796	0/0:32,0:32:93.28:0,93,1073	0/0:21,1:22:29.71:0,30,595	0/0:17,0:17:41.98:0,42,455	0/0:16,0:16:45.08:0,45,494	0/0:21,0:21:57.17:0,57,658	0/0:18,0:18:48.14:0,48,553	0/0:19,0:19:45.13:0,45,520	0/0:13,0:13:39.12:0,39,450	0/0:21,0:21:45.09:0,45,505	0/0:24,0:24:72.21:0,72,824	0/0:24,0:24:48.14:0,48,554	0/0:5,0:5:15.03:0,15,162
chr10	49916550	.	C	CT	1988.76	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-9.769;DP=706;FS=6.736;HRun=0;HaplotypeScore=64.8940;InbreedingCoeff=0.9994;MQ=77.31;MQ0=0;MQRankSum=-3.505;QD=39.78;ReadPosRankSum=0.631;VQSLOD=3.9873;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:99:0,99,1384	1/1:0,11:11:30.10:480,30,0	0/0:18,0:18:53.98:0,54,697	0/0:12,0:12:36.04:0,36,430	0/0:41,0:41:99:0,123,1686	0/0:27,0:27:81.27:0,81,1131	0/0:22,0:22:63.20:0,63,864	0/0:36,0:36:99:0,102,1412	0/0:21,0:21:60.20:0,60,839	0/0:42,0:42:99:0,126,1745	0/0:31,0:31:87.28:0,87,1199	0/0:25,0:25:75.22:0,75,1029	0/0:23,0:23:69.22:0,69,945	0/0:23,0:23:69.23:0,69,965	1/1:1,38:39:99:1631,102,0	0/0:21,0:21:60.20:0,60,839	0/0:17,0:17:51.15:0,51,694	0/0:17,0:17:45.15:0,45,625	0/0:16,0:16:48.16:0,48,671	0/0:21,0:21:60.19:0,60,821	0/0:31,0:31:93.31:0,93,1300	0/0:40,0:40:99:0,120,1664	0/0:19,0:19:54.18:0,54,754	0/0:25,0:25:75.24:0,75,1031	0/0:29,0:29:87.29:0,87,1216	0/0:24,0:24:66.22:0,66,919	0/0:32,0:32:91.85:0,92,1270	0/0:10,0:10:30.06:0,30,381
chr10	49917080	.	C	CCAT	2076.52	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-6.155;DP=614;FS=5.696;HRun=0;HaplotypeScore=84.6635;InbreedingCoeff=0.9481;MQ=84.91;MQ0=0;MQRankSum=-3.894;QD=69.22;ReadPosRankSum=1.162;VQSLOD=4.6690;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:93.30:0,93,1681	1/1:0,10:10:30.10:738,30,0	0/0:18,0:20:55.07:0,55,970	0/0:17,0:18:45.08:0,45,706	0/0:24,0:24:72.25:0,72,1342	0/0:25,0:25:75.24:0,75,1358	0/0:22,0:22:63.22:0,63,1167	0/0:24,0:24:69.23:0,69,1256	0/0:23,0:23:66.23:0,66,1224	0/0:28,0:28:84.29:0,84,1552	0/0:27,0:27:81.28:0,81,1510	0/0:13,0:13:39.13:0,39,726	0/0:22,0:22:66.21:0,66,1200	0/0:28,0:28:67.59:0,68,1486	1/1:1,19:20:60.21:1459,60,0	0/0:24,0:24:72.25:0,72,1342	0/0:22,0:22:66.21:0,66,1198	0/0:2,0:2:6.02:0,6,112	0/0:24,0:24:72.23:0,72,1274	0/0:25,0:25:75.26:0,75,1388	0/0:28,0:28:84.29:0,84,1566	0/0:23,0:23:69.22:0,69,1255	0/0:12,0:12:36.12:0,36,668	0/0:20,0:20:60.21:0,60,1117	0/0:33,0:33:93.29:0,93,1667	0/0:23,0:23:66.18:0,66,1113	0/0:29,0:28:87.30:0,87,1622	0/0:14,0:14:42.14:0,42,783
chr10	49917269	.	A	AG	15161.59	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=-12.720;DP=616;FS=3.142;HRun=0;HaplotypeScore=60.1489;InbreedingCoeff=0.9994;MQ=83.39;MQ0=0;MQRankSum=-1.667;QD=38.29;ReadPosRankSum=1.170;VQSLOD=5.0268;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,27:27:72.24:1028,72,0	0/0:12,0:12:36.03:0,36,463	0/0:22,0:21:58.87:0,59,644	0/0:25,0:24:34.65:0,35,356	1/1:1,30:31:90.03:1186,90,0	0/0:22,0:22:66.20:0,66,887	0/0:10,0:10:30.06:0,30,354	1/1:0,39:39:99:1527,117,0	0/0:18,0:18:51.14:0,51,663	1/1:0,27:27:81.17:1082,81,0	1/1:1,30:31:83.88:1066,84,0	0/0:11,0:11:33.10:0,33,444	0/0:24,0:24:72.20:0,72,956	1/1:0,24:24:51.17:728,51,0	0/0:13,0:13:39.13:0,39,544	1/1:0,20:20:60.20:858,60,0	1/1:0,22:22:60.19:855,60,0	1/1:0,15:15:42.14:600,42,0	1/1:0,18:18:54.10:664,54,0	1/1:1,28:29:84.28:1195,84,0	1/1:0,10:10:24.08:342,24,0	0/0:25,0:25:75.18:0,75,967	0/0:29,0:29:86.21:0,86,1121	0/0:9,0:9:27.09:0,27,377	1/1:0,39:39:99:1587,111,0	1/1:0,21:21:63.21:901,63,0	1/1:0,25:25:63.21:899,63,0	1/1:0,18:18:45.15:642,45,0
chr10	49918413	.	GT	G	4862.40	PASS	AB=0.642;AC=25;AF=0.446;AN=56;BaseQRankSum=2.057;DP=477;FS=1.215;HRun=8;HaplotypeScore=90.4297;InbreedingCoeff=0.1736;MQ=57.68;MQ0=1;MQRankSum=-10.656;QD=14.96;ReadPosRankSum=2.409;VQSLOD=5.0317;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:6,10:16:13.47:221,0,13	1/1:3,4:6:12.49:115,12,0	0/0:16,0:15:9.45:0,9,259	0/0:14,0:9:23.66:0,24,228	0/1:13,17:29:4.86:504,0,5	0/0:21,0:21:63.18:0,63,750	0/0:8,0:8:24.06:0,24,277	1/1:7,27:33:52.07:697,52,0	0/0:21,0:21:60.18:0,60,725	0/1:10,15:24:16.01:379,0,16	0/1:13,10:22:80.17:239,0,80	0/0:12,0:12:30.05:0,30,346	0/0:20,0:20:57.17:0,57,687	0/1:7,11:18:16.84:276,0,17	1/1:8,12:19:14.80:294,15,0	1/1:5,9:12:4:252,4,0	0/1:4,7:11:49.26:96,0,49	1/1:4,6:10:15.02:144,15,0	1/1:6,9:12:27.04:260,27,0	0/1:9,17:26:46.71:380,0,47	1/1:1,1:2:3:29,3,0	0/0:13,0:13:39.09:0,39,447	0/0:17,0:17:45.14:0,45,543	0/0:9,0:9:18.06:0,18,217	0/1:11,8:19:27.13:252,0,27	0/1:7,11:18:13.01:303,0,13	0/1:7,16:23:12.09:306,0,12	0/1:9,5:14:99:115,0,103
chr10	49918509	.	AGTT	A	13153.69	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=12.230;DP=498;FS=1.600;HRun=0;HaplotypeScore=82.7287;InbreedingCoeff=0.9983;MQ=79.25;MQ0=0;MQRankSum=-5.945;QD=43.56;ReadPosRankSum=3.541;VQSLOD=6.5364;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,28:29:69.24:1149,69,0	1/1:0,6:6:18.06:298,18,0	0/0:24,0:23:66.23:0,66,1451	0/0:19,0:19:36.15:0,36,811	1/1:0,23:23:60.21:994,60,0	0/0:27,0:27:78.25:0,78,1701	0/0:18,0:18:48.16:0,48,1066	1/1:1,12:13:30.09:459,30,0	0/0:18,0:18:54.12:0,54,1124	1/1:1,13:14:39.13:649,39,0	1/1:0,12:12:33.11:550,33,0	0/0:16,0:16:48.16:0,48,1080	0/0:25,0:25:72.25:0,72,1627	1/1:0,21:21:57.19:948,57,0	1/1:0,11:11:33.11:549,33,0	1/1:0,12:12:36.12:599,36,0	1/1:0,12:12:30.10:499,30,0	1/1:0,14:14:36.12:600,36,0	1/1:1,18:19:42.09:646,42,0	1/1:2,20:22:54.18:897,54,0	1/1:0,14:14:36.12:600,36,0	0/0:16,0:16:48.15:0,48,1023	0/0:22,0:22:66.19:0,66,1392	0/0:11,0:11:27.09:0,27,585	1/1:0,24:24:72.25:1198,72,0	1/1:0,20:20:60.19:972,60,0	1/1:0,23:23:63.22:1049,63,0	1/1:0,13:13:30.10:498,30,0
chr10	49919913	.	CAG	C	4459.98	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=16.044;DP=555;FS=11.678;HRun=0;HaplotypeScore=148.6592;InbreedingCoeff=0.9881;MQ=75.32;MQ0=1;MQRankSum=-6.613;QD=11.93;ReadPosRankSum=-0.052;VQSLOD=3.9197;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,15:20:48.07:668,48,0	1/1:0,8:8:21.07:312,21,0	0/0:14,0:14:32.29:0,32,457	0/0:19,0:16:22.30:0,22,495	1/1:28,0:28:54.33:234,54,0	0/0:30,0:30:87.25:0,87,1499	0/0:23,0:23:69.22:0,69,1196	1/1:23,0:23:49.62:176,50,0	0/0:13,0:13:39.12:0,39,689	1/1:27,0:27:36.95:233,37,0	1/1:25,0:25:51.63:181,52,0	0/0:24,0:24:69.13:0,69,1078	0/0:16,0:16:45.12:0,45,743	1/1:17,1:18:30.66:147,31,0	1/1:3,11:14:41.30:554,41,0	1/1:3,16:19:54.17:804,54,0	1/1:16,0:16:29.44:99,29,0	1/1:19,0:18:29.54:101,30,0	1/1:21,0:21:28.31:160,28,0	1/1:23,0:23:46.07:159,46,0	1/1:6,0:6:8.88:29,9,0	0/0:14,0:14:42.13:0,42,725	0/0:19,0:19:54.12:0,54,865	0/0:9,0:8:24.07:0,24,412	1/1:33,0:33:55.61:179,56,0	1/1:21,0:21:33.21:130,33,0	1/1:29,0:29:57.41:196,57,0	1/1:24,0:24:18.01:98,18,0
chr10	49919914	.	AG	A	11954.17	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=14.847;DP=555;FS=6.686;HRun=1;HaplotypeScore=113.0745;InbreedingCoeff=0.9940;MQ=74.62;MQ0=1;MQRankSum=-7.202;QD=32.31;ReadPosRankSum=-1.130;VQSLOD=3.8173;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:19:47.22:302,47,0	1/1:8,0:8:20.62:129,21,0	0/0:13,0:13:21.41:0,21,381	0/0:18,0:16:38.10:0,38,450	1/1:6,22:28:75.16:952,75,0	0/0:30,0:30:87.24:0,87,1182	0/0:24,0:24:69.16:0,69,926	1/1:0,22:22:66.21:902,66,0	0/0:14,0:14:39.11:0,39,537	1/1:1,26:27:72.53:929,73,0	1/1:2,24:26:75.18:987,75,0	0/0:24,0:24:69.10:0,69,863	0/0:16,0:16:45.07:0,45,577	1/1:2,16:18:42.04:527,42,0	1/1:13,1:14:41.34:287,41,0	1/1:18,0:18:53:337,53,0	1/1:4,12:16:42.12:565,42,0	1/1:2,16:17:39.13:541,39,0	1/1:1,20:21:63.08:755,63,0	1/1:4,20:24:66.19:874,66,0	1/1:0,5:5:12.04:167,12,0	0/0:14,0:14:41.86:0,42,549	0/0:20,0:20:53.85:0,54,693	0/0:11,0:10:27.06:0,27,355	1/1:2,31:33:84.25:1114,84,0	1/1:6,14:20:57.15:722,57,0	1/1:6,24:30:90.25:1165,90,0	1/1:3,20:23:53.83:699,54,0
chr10	49919945	.	CA	C	3604.61	PASS	AB=0.794;AC=40;AF=0.714;AN=56;BaseQRankSum=9.049;DP=525;FS=7.553;HRun=14;HaplotypeScore=124.4370;InbreedingCoeff=0.3121;MQ=66.39;MQ0=0;MQRankSum=-5.949;QD=7.84;ReadPosRankSum=3.258;VQSLOD=2.2108;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,0:20:20.78:61,21,0	1/1:2,0:10:17.21:60,17,0	0/0:15,0:11:10.71:0,11,72	0/1:14,0:12:1.11:1,0,32	1/1:6,26:35:68.46:449,68,0	0/1:17,5:22:43.27:43,0,212	0/1:12,4:17:47.29:47,0,186	1/1:11,13:27:22.82:276,23,0	0/0:15,1:16:21.44:0,21,326	0/1:7,11:19:2.13:124,0,2	1/1:8,16:26:20.74:271,21,0	0/1:14,2:17:21:21,0,134	0/0:19,2:22:6.06:0,6,357	1/1:4,6:13:23.95:141,24,0	1/1:0,2:13:28.36:106,28,0	1/1:6,0:25:32.34:95,32,0	1/1:3,9:12:23.77:164,24,0	1/1:8,6:15:19.83:129,20,0	0/1:10,6:18:22.42:129,0,22	1/1:8,13:26:53.30:320,53,0	1/1:3,1:4:2.95:21,3,0	0/1:12,2:15:12.07:12,0,196	0/1:12,4:17:11.96:12,0,216	0/0:12,0:11:26.93:0,27,228	1/1:8,16:28:47.67:305,48,0	1/1:3,13:19:19.51:246,20,0	1/1:5,21:29:62.59:408,63,0	1/1:5,12:18:3.90:162,4,0
chr10	49920113	.	T	TAG	11990.60	PASS	AB=0.810;AC=34;AF=0.607;AN=56;BaseQRankSum=9.813;DP=514;FS=1.287;HRun=0;HaplotypeScore=90.3502;InbreedingCoeff=0.8315;MQ=70.56;MQ0=0;MQRankSum=-2.078;QD=32.67;ReadPosRankSum=2.653;VQSLOD=7.0323;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,14:14:36.12:590,36,0	1/1:0,15:15:39.13:639,39,0	0/1:15,0:14:1.26:1,0,183	0/0:12,0:10:8.81:0,9,79	1/1:4,29:33:75.26:1216,75,0	0/0:18,0:19:44.96:0,45,521	0/0:15,0:15:33.10:0,33,409	1/1:11,16:27:51.15:789,51,0	0/0:18,0:18:51.14:0,51,618	1/1:8,21:30:35.01:1067,35,0	1/1:6,19:27:60.19:951,60,0	0/0:17,0:17:45.14:0,45,557	0/0:19,0:19:57.16:0,57,693	1/1:3,12:15:36.12:583,36,0	0/1:5,8:13:18.92:228,0,19	1/1:4,17:21:33.11:541,33,0	1/1:2,15:17:39.01:639,39,0	1/1:5,16:21:42.14:688,42,0	1/1:3,5:8:15.05:246,15,0	1/1:10,23:33:63.21:1019,63,0	0/0:3,1:4:3.01:0,3,36	0/0:12,0:12:36.11:0,36,446	0/0:25,0:25:58.04:0,58,683	0/0:6,0:6:18.06:0,18,223	1/1:2,14:17:39.13:639,39,0	1/1:3,17:21:57.15:876,57,0	1/1:5,29:34:72.25:1180,72,0	1/1:3,3:6:6.02:98,6,0
chr10	49920778	.	G	GA	9477.89	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-0.530;DP=673;FS=6.128;HRun=8;HaplotypeScore=82.4679;InbreedingCoeff=0.9984;MQ=78.59;MQ0=0;MQRankSum=-3.357;QD=27.79;ReadPosRankSum=-2.635;VQSLOD=4.1312;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,141,1280	0/0:10,0:10:24.01:0,24,220	0/0:16,0:17:23.72:0,24,315	0/0:14,0:14:28.37:0,28,292	1/1:7,19:26:57.04:613,57,0	0/0:34,0:34:99:0,99,906	0/0:22,0:22:60.03:0,60,549	1/1:3,23:26:69.20:796,69,0	0/0:19,0:19:51.03:0,51,467	1/1:7,15:22:47.99:523,48,0	1/1:4,23:27:47.75:800,48,0	0/0:31,0:31:87.04:0,87,796	0/0:21,0:22:62.05:0,62,550	1/1:8,18:26:21.32:493,21,0	0/0:25,1:26:40.42:0,40,624	0/0:22,0:22:51.01:0,51,467	1/1:2,36:38:99:1212,105,0	1/1:4,18:22:54.16:623,54,0	1/1:7,18:25:57.16:651,57,0	1/1:4,20:24:35.72:665,36,0	1/1:1,21:23:60.01:672,60,0	0/0:12,0:12:23.99:0,24,214	0/0:23,0:23:63.03:0,63,577	0/0:29,0:29:84.02:0,84,763	1/1:0,18:18:51.15:589,51,0	1/1:4,25:29:75.20:851,75,0	1/1:2,22:24:54.13:611,54,0	1/1:0,11:11:33.10:381,33,0
chr10	49921085	.	A	AT	4560.96	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=13.414;DP=300;FS=5.737;HRun=1;HaplotypeScore=141.1697;InbreedingCoeff=0.9453;MQ=61.39;MQ0=2;MQRankSum=-12.551;QD=27.64;ReadPosRankSum=-3.062;VQSLOD=3.6111;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:21:51.08:514,51,0	1/1:3,0:3:9.02:101,9,0	0/0:19,0:16:48.15:0,48,618	0/0:18,0:16:45.13:0,45,538	1/1:7,0:7:21.06:232,21,0	0/0:10,0:10:27.09:0,27,351	0/0:9,0:9:27.09:0,27,351	1/1:3,0:3:9.02:103,9,0	0/0:13,0:13:36.12:0,36,467	1/1:15,0:15:42.09:449,42,0	1/1:5,0:5:15.04:162,15,0	0/0:26,0:26:75.23:0,75,961	0/0:14,0:14:39.13:0,39,504	1/1:15,0:15:45.11:477,45,0	1/1:16,0:16:45.06:443,45,0	1/1:11,0:11:33.05:332,33,0	1/1:13,0:13:36.06:372,36,0	1/1:4,4:7:12.01:113,12,0	1/1:8,0:8:24.06:274,24,0	1/1:8,1:9:20.87:206,21,0	1/1:7,3:10:16.80:155,17,0	0/0:7,0:7:21.07:0,21,273	0/0:10,0:10:30.10:0,30,389	0/0:9,0:9:24.08:0,24,311	1/1:5,0:5:15:142,15,0	1/1:3,0:3:9.01:88,9,0	1/1:10,0:10:30.07:336,30,0	1/1:2,0:2:6.01:63,6,0
chr10	49921392	.	T	TAAACA	9261.71	PASS	AB=0.563;AC=33;AF=0.611;AN=54;BaseQRankSum=13.093;DP=307;FS=17.993;HRun=0;HaplotypeScore=85.7505;InbreedingCoeff=0.8453;MQ=66.92;MQ0=4;MQRankSum=-12.641;QD=81.96;ReadPosRankSum=4.346;VQSLOD=5.8473;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,12:12:36.12:1120,36,0	1/1:0,2:3:6.02:196,6,0	0/0:15,0:10:27.08:0,27,585	0/0:17,0:14:33.11:0,33,739	1/1:0,3:3:9.03:274,9,0	0/0:16,0:15:42.14:0,42,979	0/0:27,0:27:75.18:0,75,1537	1/1:1,2:4:9.02:222,9,0	0/0:20,0:20:54.13:0,54,1158	1/1:0,7:8:21.07:691,21,0	1/1:0,2:2:3.01:98,3,0	0/0:19,0:19:57.20:0,57,1291	0/0:14,0:14:42.13:0,42,934	1/1:0,9:10:27.09:880,27,0	1/1:0,9:9:27.09:881,27,0	1/1:0,6:6:18.06:588,18,0	1/1:0,5:7:15.05:491,15,0	1/1:1,7:8:17.64:685,18,0	1/1:2,3:3:9.03:296,9,0	1/1:0,5:7:15.05:490,15,0	0/1:2,7:8:24.77:604,0,25	0/0:14,0:14:42.14:0,42,931	0/0:19,0:19:54.17:0,54,1213	0/0:33,0:33:93.28:0,93,2060	1/1:0,7:7:21.07:669,21,0	1/1:0,3:5:15.03:388,15,0	1/1:0,7:7:21.07:687,21,0	./.
chr10	49923123	.	CT	C	4759.33	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=8.803;DP=791;FS=10.033;HRun=3;HaplotypeScore=119.3989;InbreedingCoeff=0.9999;MQ=80.39;MQ0=0;MQRankSum=-2.079;QD=33.28;ReadPosRankSum=2.187;VQSLOD=3.6610;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,48:52:99:1673,135,0	1/1:1,16:17:45.14:558,45,0	0/0:18,0:18:51.11:0,51,676	0/0:22,0:22:57.18:0,57,773	0/0:29,0:29:87.28:0,87,1226	0/0:34,0:34:99:0,99,1426	0/0:28,0:28:81.26:0,81,1149	0/0:38,0:37:99:0,108,1539	0/0:36,0:36:99:0,102,1451	0/0:32,0:32:93.31:0,93,1324	0/0:22,0:22:66.22:0,66,950	0/0:34,0:34:99:0,102,1429	0/0:26,0:26:78.25:0,78,1105	0/0:37,0:37:99:0,108,1555	1/1:2,34:36:99:1264,102,0	1/1:2,36:38:99:1264,102,0	0/0:41,0:41:99:0,120,1702	0/0:21,0:21:60.20:0,60,858	0/0:20,0:20:60.15:0,60,797	0/0:18,0:18:42.14:0,42,605	0/0:40,0:40:99:0,117,1649	0/0:19,0:19:54.18:0,54,774	0/0:20,0:20:60.19:0,60,848	0/0:31,0:29:93.31:0,93,1339	0/0:19,0:19:54.16:0,54,754	0/0:21,0:21:60.20:0,60,860	0/0:30,0:29:90.30:0,90,1295	0/0:12,0:12:33.11:0,33,475
chr10	49923473	.	A	AT	11194.68	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=2.456;DP=608;FS=1.503;HRun=8;HaplotypeScore=77.4985;InbreedingCoeff=0.9849;MQ=73.23;MQ0=0;MQRankSum=-1.010;QD=27.30;ReadPosRankSum=-0.317;VQSLOD=5.1473;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,38:44:99:1279,111,0	1/1:4,16:20:48.14:550,48,0	0/0:14,0:14:13.05:0,13,178	0/0:10,0:9:17.43:0,17,151	1/1:4,21:25:60.13:665,60,0	0/0:21,0:21:35.44:0,35,487	0/0:19,0:19:51.01:0,51,467	1/1:7,26:33:78.22:889,78,0	0/0:26,0:26:72:0,72,649	1/1:6,15:21:45.13:519,45,0	1/1:3,20:23:51.11:574,51,0	0/0:22,0:22:60.03:0,60,549	0/0:14,0:14:42.02:0,42,384	1/1:0,24:24:60.18:692,60,0	1/1:4,13:17:39.12:450,39,0	1/1:4,6:10:18.04:197,18,0	1/1:2,31:33:78.23:900,78,0	1/1:3,23:26:63.19:724,63,0	1/1:5,16:21:48.03:515,48,0	1/1:1,21:22:63.19:725,63,0	1/1:1,10:11:27.08:312,27,0	0/0:22,0:22:60.01:0,60,545	0/0:23,0:23:66.04:0,66,604	0/0:27,0:27:60.03:0,60,549	1/1:2,22:24:57.17:658,57,0	1/1:2,20:22:57.17:658,57,0	1/1:3,24:28:47.59:783,48,0	1/1:3,3:6:9.03:104,9,0
chr10	49924686	.	T	TG	1628.34	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=4.178;DP=709;FS=11.340;HRun=2;HaplotypeScore=111.3345;InbreedingCoeff=0.9947;MQ=88.32;MQ0=0;MQRankSum=-4.628;QD=37.87;ReadPosRankSum=2.164;VQSLOD=2.6392;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:93.76:0,94,1151	1/1:2,12:14:36.08:495,36,0	0/0:22,0:22:66.20:0,66,807	0/0:28,0:28:78.23:0,78,937	0/0:43,0:43:99:0,111,1375	0/0:15,0:15:42.12:0,42,507	0/0:15,0:15:45.13:0,45,545	0/0:39,0:39:99:0,105,1281	0/0:23,0:23:69.20:0,69,841	0/0:41,0:41:99:0,108,1323	0/0:28,0:28:69.22:0,69,853	0/0:22,0:22:66.20:0,66,807	0/0:24,0:24:72.23:0,72,891	0/0:22,0:22:45.14:0,45,558	1/1:0,29:29:87.29:1255,87,0	0/0:29,0:29:63.18:0,63,765	0/0:13,0:13:24.08:0,24,298	0/0:13,0:13:18.06:0,18,222	0/0:14,0:14:42.13:0,42,521	0/0:34,0:34:81.25:0,81,1004	0/0:33,0:33:81.25:0,81,1004	0/0:22,0:22:63.20:0,63,781	0/0:24,0:24:72.22:0,72,887	0/0:16,0:16:45.14:0,45,558	0/0:27,0:27:57.18:0,57,706	0/0:26,0:26:72.23:0,72,892	0/0:29,0:29:69.02:0,69,828	0/0:20,0:20:57.18:0,57,707
chr10	49924733	.	GAATGAATGAATGAATGAATT	G	2867.95	PASS	AB=1.000;AC=14;AF=0.250;AN=56;BaseQRankSum=2.211;DP=659;FS=2.851;HRun=0;HaplotypeScore=331.6757;InbreedingCoeff=0.0178;MQ=62.51;MQ0=8;MQRankSum=1.245;QD=9.86;ReadPosRankSum=1.080;VQSLOD=1.8226;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:39,0:39:19.61:299,0,20	1/1:5,2:7:8.96:341,9,0	0/0:18,0:8:9.02:0,9,234	0/0:29,0:18:27.08:0,27,796	0/1:38,0:38:50.67:51,0,3328	0/0:25,0:25:66.13:0,66,5133	0/0:17,0:17:36.10:0,36,2304	0/1:31,0:31:99:182,0,280	0/0:35,0:35:93.30:0,93,7098	0/1:40,0:40:99:152,0,2376	0/1:16,0:16:3.42:3,0,942	0/0:27,0:27:57.18:0,57,4821	0/0:26,0:26:60.18:0,60,4283	0/0:17,0:17:15.05:0,15,466	1/1:13,8:21:50.85:1528,51,0	0/1:25,0:25:99:301,0,112	0/1:10,0:10:8.97:9,0,228	0/0:13,0:13:5.86:0,6,187	0/1:16,0:16:99:111,0,229	0/1:24,0:24:17.94:18,0,255	0/0:18,0:18:2.88:0,3,15	0/0:27,0:27:65.40:0,65,4303	0/0:25,0:25:66.17:0,66,3918	0/0:14,0:14:42.11:0,42,2770	0/0:29,0:29:54.19:0,54,1768	0/1:24,0:24:32.76:33,0,1589	0/0:32,0:32:43.01:0,43,228	0/0:16,0:16:9.03:0,9,280
chr10	49924737	.	GAATGAATGAATGAATT	G	4509.07	PASS	AB=0.948;AC=19;AF=0.339;AN=56;BaseQRankSum=6.230;DP=676;FS=0.000;HRun=0;HaplotypeScore=283.1325;InbreedingCoeff=0.2211;MQ=60.02;MQ0=13;MQRankSum=-0.579;QD=13.15;ReadPosRankSum=-0.591;VQSLOD=2.9720;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:8,27:35:17.98:690,18,0	1/1:7,0:7:8.96:246,9,0	0/0:21,0:8:12.03:0,12,265	0/0:31,0:16:27.08:0,27,562	0/1:39,0:39:65.66:66,0,2173	0/0:25,0:25:66.13:0,66,4122	0/0:15,0:15:39.10:0,39,1971	0/1:28,0:28:99:232,0,115	0/0:37,0:37:99:0,99,5886	0/1:44,0:44:99:226,0,1089	0/1:16,0:16:17.88:18,0,554	0/0:26,0:26:60.19:0,60,4028	0/0:27,0:27:66.18:0,66,3724	0/0:19,0:19:15.05:0,15,205	1/1:20,0:20:50.84:1108,51,0	0/1:3,20:23:62.57:655,0,63	0/1:12,0:12:8.97:9,0,131	0/0:12,0:12:5.91:0,6,82	0/1:19,0:19:24.85:251,0,25	0/1:25,0:25:24.17:329,0,24	1/1:18,0:18:3.01:37,3,0	0/0:32,0:32:80.42:0,80,4136	0/0:26,0:26:69.16:0,69,3209	0/0:14,0:14:42.11:0,42,2214	0/0:31,0:31:54.18:0,54,842	0/1:24,0:24:87.32:87,0,657	1/1:33,0:33:45.14:555,45,0	0/0:17,0:16:9.03:0,9,123
chr10	49924741	.	GAATGAATGAATT	G	7129.40	PASS	AB=1.000;AC=30;AF=0.536;AN=56;BaseQRankSum=12.281;DP=683;FS=0.000;HRun=0;HaplotypeScore=226.5687;InbreedingCoeff=0.4845;MQ=59.37;MQ0=17;MQRankSum=-5.826;QD=16.89;ReadPosRankSum=-1.902;VQSLOD=2.8609;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:32,0:32:17.98:455,18,0	1/1:5,0:5:8.96:191,9,0	0/0:25,0:8:12.02:0,12,167	0/0:30,0:15:27.07:0,27,408	0/1:39,0:39:99:146,0,940	0/0:26,0:26:72.11:0,72,3190	0/0:15,0:15:41.70:0,42,1483	1/1:29,0:29:61.66:676,62,0	0/0:37,0:37:99:0,102,4526	0/1:43,0:43:27.74:521,0,28	0/1:17,0:17:79.58:80,0,125	0/0:26,0:26:58.43:0,58,3059	0/0:26,0:26:66.18:0,66,2869	1/1:22,0:22:13.39:56,13,0	1/1:20,0:20:50.84:884,51,0	0/1:23,0:23:7.94:420,0,8	0/1:14,0:14:20.37:20,0,28	1/1:13,0:13:5.36:22,5,0	1/1:1,16:17:47.79:465,48,0	1/1:5,21:26:41.91:1010,42,0	1/1:3,14:17:3.01:108,3,0	0/0:32,0:32:86.42:0,86,3187	0/0:28,0:28:75.14:0,75,2556	0/0:16,0:16:48.11:0,48,1756	0/1:34,0:34:25.01:139,0,25	1/1:26,0:26:1.10:287,1,0	1/1:6,26:32:45.15:1617,45,0	1/1:13,0:12:8.03:34,8,0
chr10	49924745	.	GAATGAATT	G	10480.26	PASS	AB=0.976;AC=34;AF=0.607;AN=56;BaseQRankSum=14.226;DP=674;FS=4.591;HRun=0;HaplotypeScore=167.5155;InbreedingCoeff=0.7987;MQ=57.08;MQ0=18;MQRankSum=-5.232;QD=24.95;ReadPosRankSum=-2.032;VQSLOD=4.2975;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:29:17.98:316,18,0	1/1:8,0:8:17.79:188,18,0	0/0:25,0:7:15.01:0,15,142	0/0:27,0:12:27.06:0,27,311	0/1:37,2:39:99:457,0,107	0/0:26,0:26:75.11:0,75,2266	0/0:15,0:15:41.73:0,42,1009	1/1:26,0:26:61.96:530,62,0	0/0:35,0:35:99:0,102,3171	1/1:1,41:42:99:2070,120,0	1/1:0,18:18:38.36:451,38,0	0/0:22,0:22:58.41:0,58,2167	0/0:24,0:24:69.17:0,69,2069	1/1:3,21:24:15.05:407,15,0	1/1:21,0:21:56.77:704,57,0	0/1:23,0:23:7.94:281,0,8	1/1:1,14:15:8.89:117,9,0	1/1:1,13:14:6.02:163,6,0	1/1:17,0:17:47.79:403,48,0	1/1:25,0:25:41.76:599,42,0	1/1:17,0:17:3.01:61,3,0	0/0:32,0:32:92.38:0,92,2233	0/0:30,0:30:81.12:0,81,1927	0/0:18,0:18:54.09:0,54,1307	1/1:3,32:35:54.05:1342,54,0	1/1:1,26:27:78.04:1227,78,0	1/1:29,0:29:45.15:919,45,0	1/1:5,6:10:9.03:245,9,0
chr10	49924749	.	GAATT	G	7170.98	PASS	AB=1.000;AC=35;AF=0.625;AN=56;BaseQRankSum=15.622;DP=653;FS=3.947;HRun=0;HaplotypeScore=133.0525;InbreedingCoeff=0.8714;MQ=55.82;MQ0=18;MQRankSum=-4.668;QD=17.84;ReadPosRankSum=-1.036;VQSLOD=4.0232;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:28:17.96:176,18,0	1/1:7,0:7:20.78:158,21,0	0/0:24,0:6:15.01:0,15,142	0/0:26,0:11:30.03:0,30,293	1/1:3,35:38:99:1065,104,0	0/0:25,0:25:75.07:0,75,1401	0/0:16,0:16:47.70:0,48,693	1/1:25,0:25:70.16:594,70,0	0/0:34,0:34:99:0,102,1997	1/1:41,1:42:99:1180,120,0	1/1:18,0:18:38.28:275,38,0	0/0:22,0:22:61.39:0,61,1386	0/0:24,0:24:72.15:0,72,1354	1/1:23,0:23:15.04:177,15,0	1/1:22,0:22:62.73:530,63,0	0/1:21,0:21:7.95:141,0,8	1/1:14,0:14:8.89:71,9,0	1/1:13,0:13:6.02:71,6,0	1/1:16,0:16:47.82:379,48,0	1/1:22,0:22:41.74:376,42,0	1/1:16,0:16:3.01:33,3,0	0/0:32,0:32:95.35:0,95,1487	0/0:30,0:30:81.10:0,81,1291	0/0:18,0:18:54.07:0,54,858	1/1:33,0:33:54.03:603,54,0	1/1:27,0:27:77.98:735,78,0	1/1:28,0:28:45.12:500,45,0	1/1:9,0:8:9.03:106,9,0
chr10	49925801	.	A	AT	9093.31	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-15.758;DP=657;FS=1.376;HRun=8;HaplotypeScore=61.0902;InbreedingCoeff=0.9995;MQ=71.43;MQ0=0;MQRankSum=-1.726;QD=27.81;ReadPosRankSum=-0.734;VQSLOD=5.1578;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:69.03:0,69,631	0/0:16,0:16:38.99:0,39,350	0/0:16,0:15:35.93:0,36,316	0/0:16,0:17:38.59:0,39,331	1/1:6,20:27:63.16:712,63,0	0/0:30,0:30:90:0,90,812	0/0:22,0:22:57.03:0,57,522	1/1:6,21:27:60.15:671,60,0	0/0:22,0:22:57.01:0,57,516	1/1:6,16:22:48.14:554,48,0	1/1:1,23:24:66.20:762,66,0	0/0:21,0:21:60.03:0,60,549	0/0:21,0:21:60.02:0,60,544	1/1:6,25:32:75.05:837,75,0	0/0:27,0:27:72.01:0,72,654	0/0:34,0:33:99:0,99,900	1/1:0,10:10:27.08:312,27,0	1/1:2,15:17:45.13:519,45,0	1/1:5,27:32:84.20:953,84,0	1/1:3,18:21:54.16:623,54,0	1/1:0,9:9:24.07:277,24,0	0/0:24,0:24:66.03:0,66,604	0/0:24,0:24:60.01:0,60,545	0/0:30,0:30:78.04:0,78,714	1/1:1,24:25:60.18:692,60,0	1/1:3,22:25:63.19:727,63,0	1/1:4,33:37:84.25:969,84,0	1/1:4,15:19:42.12:485,42,0
chr10	49926402	.	C	CTCTG	1331.56	PASS	AB=0.913;AC=9;AF=0.161;AN=56;BaseQRankSum=9.070;DP=807;FS=3.285;HRun=0;HaplotypeScore=178.2237;InbreedingCoeff=-0.1898;MQ=53.95;MQ0=18;MQRankSum=-5.315;QD=4.81;ReadPosRankSum=1.677;VQSLOD=2.6281;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,123,2021	0/0:11,0:11:33.11:0,33,593	0/0:49,0:14:35.89:0,36,549	0/1:73,0:21:4.96:5,0,158	0/0:42,0:42:23.67:0,24,330	0/0:13,0:13:30.07:0,30,480	0/0:26,0:26:69.22:0,69,1204	0/0:28,0:27:48.13:0,48,748	0/0:15,0:15:45.14:0,45,772	0/1:31,0:31:99:284,0,507	0/0:23,0:23:15.44:0,15,235	0/0:22,0:22:57.20:0,57,1012	0/0:19,0:18:39.13:0,39,696	0/1:18,10:28:65.31:65,0,427	0/0:29,0:29:87.27:0,87,1499	0/0:44,0:44:99:0,126,2151	0/1:15,12:27:99:356,0,181	0/1:21,7:29:78.28:78,0,536	0/1:31,0:28:99:159,0,410	0/0:29,0:29:21.76:0,22,372	0/0:18,1:18:21.01:0,21,361	0/0:30,0:30:81.23:0,81,1367	0/0:29,0:29:75.14:0,75,1317	0/0:33,0:33:55.19:0,55,1117	0/0:8,5:13:8.38:0,8,111	0/1:28,0:28:99:428,0,355	0/1:17,0:17:58.97:59,0,70	0/1:13,0:13:34.67:35,0,303
chr10	49926412	.	CTGTGTCTCTGTCTCTG	C	4427.45	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=11.044;DP=781;FS=19.243;HRun=0;HaplotypeScore=301.5957;InbreedingCoeff=0.8869;MQ=54.27;MQ0=15;MQRankSum=-4.835;QD=13.06;ReadPosRankSum=-7.145;VQSLOD=1.0051;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,120,3529	0/0:14,0:14:33.35:0,33,1018	0/0:46,0:14:6.79:0,7,407	0/0:61,0:20:8.36:0,8,313	1/1:11,32:43:6.32:15,6,0	0/0:12,0:12:21.04:0,21,578	0/0:29,0:29:72.16:0,72,1952	1/1:26,0:25:26.99:252,27,0	0/0:16,0:16:38.88:0,39,1213	1/1:9,19:28:37.23:713,37,0	1/1:6,18:24:3.38:8,3,0	0/0:22,0:22:59.42:0,59,2339	0/0:22,0:21:42.01:0,42,1184	1/1:27,0:27:32.45:483,32,0	0/0:31,0:31:78.25:0,78,3055	0/0:45,0:45:93.25:0,93,3088	1/1:25,0:25:24.84:522,25,0	1/1:31,0:31:27.03:267,27,0	1/1:10,13:22:38.82:653,39,0	1/1:7,21:28:3.22:7,3,0	1/1:22,0:21:12.87:102,13,0	0/0:29,0:29:66.16:0,66,2094	0/0:29,0:28:63.18:0,63,1902	0/0:33,0:33:62.75:0,63,2106	1/1:13,0:13:10.12:60,10,0	1/1:7,16:23:48.02:986,48,0	1/1:1,13:14:3.01:128,3,0	1/1:12,0:12:14.22:232,14,0
chr10	49927841	.	T	TG	14081.05	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=-13.609;DP=663;FS=4.215;HRun=5;HaplotypeScore=69.1029;InbreedingCoeff=0.9999;MQ=69.68;MQ0=1;MQRankSum=-1.594;QD=34.60;ReadPosRankSum=-0.253;VQSLOD=4.9603;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,32:36:81.26:1063,81,0	0/0:11,0:11:33.08:0,33,354	0/0:25,0:22:45.74:0,46,442	0/0:19,0:16:38.26:0,38,372	1/1:3,29:33:93.30:1201,93,0	0/0:21,0:21:57.14:0,57,612	0/0:19,0:19:51.11:0,51,539	1/1:0,21:21:60.12:714,60,0	0/0:25,0:25:72.12:0,72,746	1/1:2,29:31:82.10:1118,82,0	1/1:0,17:17:45.15:591,45,0	0/0:18,0:18:51.13:0,51,548	0/0:23,0:23:63.12:0,63,660	1/1:0,22:22:63.20:829,63,0	0/0:28,0:28:78.20:0,78,838	1/1:0,37:37:99:1342,102,0	1/1:4,29:33:68.24:977,68,0	1/1:1,21:22:60.20:789,60,0	1/1:4,15:19:51.16:660,51,0	1/1:1,29:30:84.05:1022,84,0	1/1:1,26:28:69.22:906,69,0	0/0:21,0:21:57.12:0,57,598	0/0:19,0:19:57.11:0,57,589	0/0:27,0:27:69.13:0,69,729	1/1:0,21:21:60.20:790,60,0	1/1:3,20:23:60.19:778,60,0	1/1:0,21:20:60.19:787,60,0	1/1:1,12:13:39.13:513,39,0
chr10	49928862	.	GGTCT	G	1844.81	PASS	AB=0.976;AC=6;AF=0.107;AN=56;BaseQRankSum=2.205;DP=678;FS=1.284;HRun=0;HaplotypeScore=149.8087;InbreedingCoeff=0.5017;MQ=68.06;MQ0=5;MQRankSum=3.606;QD=15.90;ReadPosRankSum=1.428;VQSLOD=3.6319;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:16,30:46:86.10:1339,86,0	0/0:8,0:8:15.05:0,15,358	0/0:32,0:21:12.04:0,12,220	0/0:33,0:28:14.99:0,15,230	0/0:24,0:24:8.99:0,9,84	0/0:20,0:20:30.10:0,30,686	0/0:21,0:21:36.08:0,36,798	0/0:37,0:37:57.07:0,57,775	0/0:21,0:21:39.12:0,39,868	0/0:28,0:28:57.14:0,57,767	0/0:20,0:20:5.95:0,6,55	0/0:27,0:27:60.19:0,60,1371	0/1:19,1:20:8.45:8,0,812	0/0:26,0:26:26.83:0,27,285	0/0:30,0:30:54.19:0,54,1260	1/1:12,15:28:42.09:619,42,0	0/0:28,0:27:1.25:0,1,3	0/0:20,0:20:17.65:0,18,239	0/0:16,0:15:8.49:0,8,59	0/0:19,0:19:15.02:0,15,185	0/0:27,0:27:4.24:0,4,28	0/1:22,0:22:7.06:7,0,771	0/0:16,0:16:27.09:0,27,645	0/0:36,0:36:18.61:0,19,1453	0/0:17,0:17:11.99:0,12,120	0/0:23,0:23:33.05:0,33,345	0/0:27,0:27:33.04:0,33,371	0/0:6,0:6:3:0,3,27
chr10	49928887	.	G	GCC	1767.24	PASS	AB=0.887;AC=12;AF=0.214;AN=56;BaseQRankSum=8.929;DP=724;FS=8.596;HRun=0;HaplotypeScore=164.6342;InbreedingCoeff=-0.2689;MQ=51.17;MQ0=16;MQRankSum=-9.806;QD=6.55;ReadPosRankSum=-6.810;VQSLOD=0.4762;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,120,1159	0/0:8,0:8:21.07:0,21,342	0/0:40,0:15:38.10:0,38,574	0/0:58,0:27:35.77:0,36,690	0/0:26,3:29:3.83:0,4,294	0/0:20,0:20:60.17:0,60,925	0/0:23,0:23:63.20:0,63,999	0/1:43,0:42:1.26:1,0,1496	0/0:18,0:18:54.18:0,54,877	0/1:25,6:31:99:500,0,667	0/1:12,4:16:39.39:39,0,96	0/0:28,0:28:81.24:0,81,1268	0/0:24,0:24:72.20:0,72,1120	0/1:22,5:27:99:423,0,487	0/0:31,0:31:84.17:0,84,1360	0/0:24,0:23:62.83:0,63,673	0/1:25,2:26:97.10:97,0,168	0/1:24,1:25:74.51:75,0,508	0/1:18,1:16:31.53:32,0,496	0/1:16,4:20:99:119,0,211	0/0:26,5:32:19.01:0,19,281	0/0:20,0:20:57.17:0,57,863	0/0:18,0:18:51.15:0,51,805	0/0:36,0:36:99:0,105,1627	0/1:14,1:15:17.63:18,0,259	0/1:20,1:21:99:270,0,454	0/1:13,7:20:99:235,0,336	0/1:5,1:6:99:105,0,101
chr10	49928896	.	T	TCTGTCTGCCTGC	8265.51	PASS	AB=0.957;AC=14;AF=0.250;AN=56;BaseQRankSum=1.860;DP=771;FS=32.519;HRun=0;HaplotypeScore=277.7157;InbreedingCoeff=-0.3330;MQ=47.51;MQ0=21;MQRankSum=-10.645;QD=23.35;ReadPosRankSum=-3.416;VQSLOD=2.4366;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,120,3067	0/0:8,0:8:23.44:0,23,668	0/0:44,0:12:29.52:0,30,488	0/0:74,0:23:32.88:0,33,470	0/1:30,0:31:71.19:100,0,71	0/0:20,0:20:54.13:0,54,1232	0/0:24,0:24:59.91:0,60,1411	0/1:54,0:52:99:1921,0,108	0/0:19,0:19:57.15:0,57,1387	0/1:34,0:36:99:1207,0,476	0/1:22,0:22:82:82,0,127	0/0:25,0:25:72.20:0,72,2002	0/0:27,0:27:75.21:0,75,1813	0/1:23,0:23:99:472,0,377	0/0:33,0:33:78:0,78,2026	0/0:26,0:25:62.96:0,63,1397	0/1:13,9:26:99:263,0,124	0/1:25,0:25:99:1002,0,322	0/1:20,0:17:99:388,0,107	0/1:21,0:21:99:279,0,191	0/1:29,0:30:24.88:301,0,25	0/0:17,0:17:43.95:0,44,1344	0/0:18,0:18:47.48:0,47,1243	0/0:35,0:35:99:0,99,2796	0/1:16,1:17:67.67:123,0,68	0/1:24,0:24:99:1173,0,179	0/1:18,1:20:99:824,0,139	0/1:4,0:4:41.04:131,0,41
chr10	49928919	.	GTC	G	1013.48	PASS	AB=0.787;AC=7;AF=0.125;AN=56;BaseQRankSum=8.868;DP=930;FS=2.720;HRun=0;HaplotypeScore=181.1591;InbreedingCoeff=-0.1564;MQ=53.07;MQ0=37;MQRankSum=-8.486;QD=5.17;ReadPosRankSum=0.454;VQSLOD=2.9492;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,144,2452	0/0:7,0:7:18.06:0,18,292	0/0:105,0:21:41.85:0,42,522	0/0:127,0:36:36.85:0,37,527	0/0:20,9:29:27.09:0,27,453	0/0:27,0:27:81.28:0,81,1377	0/0:32,0:32:93.30:0,93,1578	0/1:23,17:39:99:464,0,622	0/0:20,0:20:60.19:0,60,1007	0/1:29,9:38:99:245,0,1128	0/0:16,7:23:23.72:0,24,411	0/0:22,0:22:60.19:0,60,998	0/0:28,0:28:84.27:0,84,1427	0/0:29,3:32:25.56:0,26,855	0/0:34,0:34:90.29:0,90,1521	0/0:26,0:25:69.24:0,69,1190	0/0:24,2:26:41.93:0,42,624	0/1:18,6:24:74.04:74,0,447	0/1:24,5:28:99:123,0,779	0/0:18,5:23:1.18:0,1,501	0/0:23,4:27:20.70:0,21,363	0/0:23,0:23:63.20:0,63,1038	0/0:28,0:27:81.28:0,81,1364	0/0:36,0:36:93.32:0,93,1604	0/1:12,5:17:24.92:25,0,192	0/1:18,6:24:99:139,0,676	0/1:17,7:24:74.43:74,0,567	0/0:4,0:4:9.03:0,9,156
chr10	49929683	.	AT	A	3435.14	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=12.202;DP=785;FS=6.976;HRun=1;HaplotypeScore=79.5547;InbreedingCoeff=0.9997;MQ=89.86;MQ0=0;MQRankSum=-2.664;QD=39.48;ReadPosRankSum=2.551;VQSLOD=4.3101;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,53:53:99:2135,154,0	0/0:13,0:13:39.13:0,39,623	0/0:29,0:30:39.33:0,39,1144	0/0:29,0:29:87.12:0,87,1312	0/0:24,0:24:69.22:0,69,1078	0/0:21,0:21:63.21:0,63,1007	0/0:29,0:29:87.27:0,87,1357	0/0:21,0:21:63.20:0,63,967	0/0:30,0:30:87.30:0,87,1390	0/0:25,0:25:75.24:0,75,1155	0/0:21,0:21:63.21:0,63,1007	0/0:27,0:27:81.28:0,81,1287	0/0:33,0:33:99:0,99,1544	0/0:34,0:34:99:0,99,1580	0/0:43,0:43:99:0,129,2054	1/1:0,34:34:93.31:1300,93,0	0/0:39,0:39:99:0,117,1783	0/0:28,0:28:84.26:0,84,1317	0/0:26,0:26:78.24:0,78,1201	0/0:19,0:19:57.19:0,57,903	0/0:27,0:27:81.28:0,81,1294	0/0:27,0:27:75.23:0,75,1154	0/0:18,0:18:54.17:0,54,832	0/0:33,0:33:99:0,99,1581	0/0:27,0:26:81.27:0,81,1272	0/0:35,0:35:99:0,105,1642	0/0:27,0:27:78.19:0,78,1106	0/0:11,0:11:30.09:0,30,455
chr10	49930314	.	GT	G	14190.91	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=13.237;DP=751;FS=1.942;HRun=5;HaplotypeScore=74.5127;InbreedingCoeff=1.0000;MQ=82.07;MQ0=0;MQRankSum=-0.982;QD=30.92;ReadPosRankSum=1.679;VQSLOD=5.5731;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,35:35:96.27:1089,96,0	0/0:15,0:15:39.13:0,39,531	0/0:24,0:24:60.20:0,60,810	0/0:16,0:16:39.11:0,39,498	1/1:3,29:32:81.23:918,81,0	0/0:26,0:26:75.23:0,75,1008	0/0:28,0:28:78.26:0,78,1061	1/1:1,39:40:99:1271,114,0	0/0:27,0:27:75.25:0,75,1026	1/1:1,36:37:99:1180,105,0	1/1:0,27:27:78.22:884,78,0	0/0:29,0:29:87.29:0,87,1190	0/0:25,0:25:69.23:0,69,941	1/1:2,23:25:66.19:748,66,0	0/0:45,0:45:99:0,129,1763	1/1:0,24:24:69.20:782,69,0	1/1:0,24:24:66.19:748,66,0	1/1:0,35:35:93.27:1054,93,0	1/1:3,19:22:57.14:629,57,0	1/1:0,25:25:72.21:816,72,0	1/1:0,31:31:81.23:918,81,0	0/0:23,0:23:66.21:0,66,887	0/0:16,0:16:48.16:0,48,657	0/0:18,0:18:51.15:0,51,680	1/1:1,24:25:72.21:816,72,0	1/1:1,27:28:78.21:874,78,0	1/1:2,30:32:81.23:919,81,0	1/1:1,16:17:48.14:544,48,0
chr10	49934241	.	TGA	T	594.71	PASS	AB=0.966;AC=14;AF=0.250;AN=56;BaseQRankSum=5.619;DP=733;FS=8.376;HRun=0;HaplotypeScore=174.5827;InbreedingCoeff=-0.0583;MQ=63.63;MQ0=14;MQRankSum=-0.482;QD=1.92;ReadPosRankSum=1.234;VQSLOD=1.5808;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:23,5:25:12.03:141,12,0	0/0:17,0:17:7.94:0,8,53	0/0:46,0:26:16.37:0,16,244	0/0:67,0:32:30.13:0,30,373	0/0:28,0:28:7.12:0,7,88	0/1:22,2:24:9.93:10,0,723	0/0:21,3:24:0.26:0,0,443	0/1:40,0:40:99:126,0,147	0/0:23,2:25:21.85:0,22,807	0/1:26,0:26:45.72:46,0,221	0/0:21,0:20:0.47:0,0,1	0/0:17,0:17:42.14:0,42,661	0/1:28,4:32:33.81:34,0,879	0/0:18,0:18:0.08:0,0,42	0/1:22,0:27:23.35:23,0,83	1/1:16,13:28:6.32:290,6,0	0/0:18,0:19:12.29:0,12,86	0/1:13,0:14:10:10,0,19	0/1:17,0:15:4.53:5,0,80	0/1:32,0:31:31.32:31,0,56	0/0:17,0:17:0:0,0,0	0/0:22,1:23:15.82:0,16,714	0/0:25,1:26:36.89:0,37,1031	0/0:30,3:32:6.71:0,7,1007	0/0:29,0:28:1.90:0,2,60	0/1:21,0:20:12.29:12,0,222	0/1:20,0:20:12.17:12,0,49	0/0:10,0:11:1.70:0,2,23
chr10	49934256	.	G	GAGAGAC	891.80	PASS	AB=1.000;AC=12;AF=0.214;AN=56;BaseQRankSum=7.977;DP=797;FS=0.597;HRun=0;HaplotypeScore=237.6466;InbreedingCoeff=0.2183;MQ=57.27;MQ0=20;MQRankSum=-5.453;QD=3.51;ReadPosRankSum=1.170;VQSLOD=2.5654;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:25:1.52:58,2,0	1/1:2,15:17:8.99:163,9,0	0/0:38,0:18:13.02:0,13,310	0/0:62,0:27:33.53:0,34,503	0/0:30,0:29:3.60:0,4,26	0/0:26,0:26:72.01:0,72,1267	0/0:25,0:24:53.30:0,53,855	0/1:47,0:43:10.41:10,0,320	0/0:24,0:24:68.90:0,69,1288	0/0:29,0:28:9.97:0,10,86	0/0:20,0:19:3.30:0,3,25	0/0:16,0:16:48.14:0,48,994	0/0:39,0:39:99:0,105,1732	0/0:23,0:23:9.94:0,10,70	1/1:28,4:31:27.09:567,27,0	0/1:27,0:26:13.11:195,0,13	0/0:27,0:27:11.55:0,12,80	0/1:15,0:15:14.02:14,0,38	0/0:28,0:26:22.82:0,23,286	0/1:38,0:37:11.85:12,0,94	0/0:19,0:18:6.01:0,6,81	0/0:23,0:22:57.17:0,57,1162	0/0:32,0:32:90.22:0,90,1680	0/0:33,0:32:83.79:0,84,1568	0/0:34,0:32:3.46:0,3,86	0/1:25,0:22:15.52:16,0,142	0/1:25,0:24:9.79:10,0,322	0/0:15,0:13:10.47:0,10,56
chr10	49934264	.	GAC	G	3044.11	PASS	AB=0.954;AC=27;AF=0.482;AN=56;BaseQRankSum=10.093;DP=800;FS=20.335;HRun=0;HaplotypeScore=184.6180;InbreedingCoeff=0.2379;MQ=55.00;MQ0=20;MQRankSum=-2.031;QD=5.82;ReadPosRankSum=-3.596;VQSLOD=1.4105;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:25:16.84:91,17,0	0/1:16,0:16:22.63:34,0,23	0/1:32,0:15:11.52:12,0,168	0/0:45,1:15:19.66:0,20,252	0/1:25,3:27:1.57:110,0,2	0/0:26,0:26:35.84:0,36,993	0/0:26,0:25:39.65:0,40,718	0/1:47,3:45:24.63:728,0,25	0/0:25,0:25:61.37:0,61,1073	1/1:26,5:29:14.72:433,15,0	1/1:18,2:19:11.98:98,12,0	0/0:21,0:21:60.11:0,60,938	0/0:36,0:36:67.06:0,67,1316	0/1:23,3:26:15.18:147,0,15	0/1:31,0:30:23.40:23,0,78	0/1:34,0:33:9.40:114,0,9	1/1:23,1:24:5.62:49,6,0	1/1:16,1:17:15.05:153,15,0	0/1:26,1:25:89.43:203,0,89	0/1:36,3:38:13.26:184,0,13	0/1:17,1:17:14.14:19,0,14	0/0:22,0:21:45.35:0,45,860	0/0:35,0:35:84.30:0,84,1356	0/0:40,0:39:80.94:0,81,1461	1/1:20,12:30:24.10:188,24,0	0/1:27,2:25:59.72:252,0,60	1/1:20,5:24:24.22:158,24,0	1/1:12,3:13:34.75:244,35,0
chr10	49934272	.	G	GAC	1463.03	PASS	AB=0.902;AC=14;AF=0.250;AN=56;BaseQRankSum=8.322;DP=801;FS=0.423;HRun=0;HaplotypeScore=190.2551;InbreedingCoeff=0.0279;MQ=51.14;MQ0=16;MQRankSum=-5.204;QD=4.22;ReadPosRankSum=-0.433;VQSLOD=2.6422;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:27:1.71:2,0,43	0/0:15,0:15:9.41:0,9,36	0/0:15,0:7:6.74:0,7,101	0/0:34,0:7:17.76:0,18,160	0/0:30,0:29:16.72:0,17,149	0/0:29,0:29:84.22:0,84,1194	0/0:28,0:27:65.90:0,66,889	0/1:47,7:49:99:605,0,116	0/0:24,0:24:66.21:0,66,981	0/0:37,0:35:6.59:0,7,470	0/0:21,0:20:6.33:0,6,50	0/0:25,0:25:69.19:0,69,984	0/0:36,0:36:99:0,99,1450	0/1:24,0:24:3.78:4,0,37	0/0:30,0:29:18.29:0,18,90	1/1:37,0:36:25.77:182,26,0	0/1:24,0:24:41.47:41,0,49	0/1:17,0:17:18.34:18,0,32	0/1:23,5:27:99:259,0,148	0/1:17,21:37:7.95:159,0,8	1/1:8,12:19:5.12:65,5,0	0/0:24,0:23:60.15:0,60,831	0/0:32,0:32:90.29:0,90,1348	0/0:43,0:42:99:0,113,1593	0/0:30,0:28:0.98:0,1,77	0/1:30,0:26:99:133,0,122	0/1:15,14:29:23.09:102,0,23	0/1:14,0:12:9.30:47,0,9
chr10	49934274	.	GAC	G	1873.51	PASS	AB=0.959;AC=15;AF=0.268;AN=56;BaseQRankSum=8.039;DP=796;FS=42.654;HRun=0;HaplotypeScore=183.9985;InbreedingCoeff=-0.2227;MQ=51.24;MQ0=15;MQRankSum=-5.559;QD=4.50;ReadPosRankSum=-4.872;VQSLOD=0.0423;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:27:1.24:0,1,82	0/0:14,0:14:19.88:0,20,115	0/0:13,0:7:7.73:0,8,41	0/0:31,0:7:6.09:0,6,81	0/1:27,3:29:23.37:106,0,23	0/0:30,0:30:74.77:0,75,1313	0/0:29,1:29:24.15:0,24,1031	0/1:48,2:52:42.94:475,0,43	0/0:24,0:24:69.22:0,69,1256	0/1:37,1:36:99:305,0,320	1/1:20,0:19:11.97:97,12,0	0/0:24,0:24:69.18:0,69,1165	0/0:34,0:34:99:0,99,1733	0/1:23,0:23:25.32:83,0,25	0/0:32,0:31:15.66:0,16,97	0/1:39,0:38:20.89:21,0,67	0/1:24,0:24:38.28:38,0,48	0/1:17,0:17:45.06:91,0,45	0/1:20,2:22:62.66:305,0,63	0/1:37,1:38:14.89:55,0,15	0/0:20,0:19:1.15:0,1,5	0/0:22,0:21:53.20:0,53,905	0/0:32,0:32:90.24:0,90,1541	0/0:43,0:42:99:0,108,1935	0/1:28,2:28:43.07:135,0,43	0/1:31,0:27:99:124,0,315	0/1:29,0:29:56.77:57,0,62	0/1:14,0:12:52.18:138,0,52
chr10	49934277	.	A	AGAGACG	266.95	PASS	AB=1.000;AC=6;AF=0.107;AN=56;BaseQRankSum=3.106;DP=771;FS=10.420;HRun=0;HaplotypeScore=227.1301;InbreedingCoeff=0.2823;MQ=50.77;MQ0=13;MQRankSum=-2.818;QD=2.28;ReadPosRankSum=-0.410;VQSLOD=1.5494;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:31,0:28:17.33:38,0,17	1/1:11,2:13:8.71:323,9,0	0/0:11,0:6:2.88:0,3,15	0/1:23,0:5:0.37:0,0,20	0/0:28,0:27:14.88:0,15,112	0/0:29,0:29:72.16:0,72,1367	0/0:28,0:27:65.90:0,66,1273	0/0:55,0:50:89.65:0,90,580	0/0:24,0:24:66.18:0,66,1367	0/0:36,0:34:73.73:0,74,490	0/1:20,0:19:0:0,0,1	0/0:25,0:25:66.11:0,66,1120	0/0:34,0:34:96.21:0,96,1796	0/0:23,0:23:10.03:0,10,66	0/0:18,17:34:13.86:0,14,67	0/0:40,0:39:12.65:0,13,111	0/0:24,0:24:11.21:0,11,65	0/0:17,0:17:10.66:0,11,65	0/0:23,0:22:41.49:0,41,288	0/0:37,0:36:25.28:0,25,170	0/0:20,0:19:5.04:0,5,34	0/0:21,0:20:51.08:0,51,928	0/0:32,0:32:84.21:0,84,1601	0/0:43,0:42:99:0,108,1985	0/0:29,0:27:9.99:0,10,54	0/1:30,0:26:8.44:8,0,205	0/0:32,0:31:37.70:0,38,350	0/0:7,0:5:2.54:0,3,37
chr10	49934280	.	GAC	G	902.09	PASS	AB=0.963;AC=17;AF=0.304;AN=56;BaseQRankSum=11.041;DP=747;FS=9.350;HRun=0;HaplotypeScore=174.5993;InbreedingCoeff=-0.3586;MQ=50.27;MQ0=11;MQRankSum=-6.299;QD=1.97;ReadPosRankSum=-2.978;VQSLOD=1.5313;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:20,8:25:46.65:47,0,93	0/1:13,0:13:2.28:2,0,219	0/0:6,0:2:2.60:0,3,10	0/1:17,0:4:12.72:36,0,13	0/1:27,0:26:59.40:59,0,113	0/0:30,0:30:81.66:0,82,1412	0/0:27,0:26:59.51:0,60,1194	0/1:51,0:46:78.77:79,0,461	0/0:26,0:26:75.18:0,75,1297	0/1:36,0:34:99:248,0,751	0/1:16,0:15:0:0,0,0	0/0:25,0:25:72.18:0,72,1264	0/0:34,0:34:99:0,102,1802	0/1:22,0:22:59.88:60,0,61	0/1:27,6:32:33.95:49,0,34	0/1:27,13:39:99:258,0,191	0/0:25,0:25:15.78:0,16,198	0/1:17,0:17:6.48:6,0,183	0/1:21,0:20:37.64:38,0,222	0/1:37,0:36:5.77:6,0,201	0/0:20,0:19:5:0,5,51	0/0:21,0:20:54.02:0,54,926	0/0:32,0:32:90.25:0,90,1561	0/0:44,0:43:99:0,114,1972	0/1:29,0:27:38.78:39,0,192	0/1:30,0:26:72.08:72,0,724	0/1:33,0:32:14.33:14,0,210	0/1:7,0:5:36.90:37,0,152
chr10	49935239	.	T	TAA	8184.94	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=-14.787;DP=498;FS=5.689;HRun=4;HaplotypeScore=80.0512;InbreedingCoeff=0.9410;MQ=70.54;MQ0=1;MQRankSum=0.280;QD=34.98;ReadPosRankSum=-1.242;VQSLOD=4.1278;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,0:15:38.08:350,38,0	0/0:8,0:8:23.20:0,23,128	0/0:16,0:14:21.35:0,21,325	0/1:8,0:7:2.52:3,0,72	1/1:3,21:24:60.17:959,60,0	0/0:20,0:20:19.60:0,20,204	0/0:10,0:10:23.44:0,23,126	0/0:28,0:28:60.95:0,61,305	0/0:16,0:16:38.15:0,38,207	1/1:1,20:23:66.19:1061,66,0	1/1:1,24:26:66.23:1107,66,0	0/0:15,0:15:33.52:0,34,184	0/0:19,0:19:31.78:0,32,199	1/1:0,20:20:48.16:819,48,0	0/0:13,0:13:26.83:0,27,146	1/1:1,0:19:37.60:341,38,0	1/1:2,16:17:39.13:648,39,0	1/1:3,23:28:42.13:719,42,0	0/0:18,0:18:44.68:0,45,228	0/0:21,0:21:57.11:0,57,355	0/0:11,0:11:31.84:0,32,171	0/0:13,0:13:33.35:0,33,184	0/0:22,0:22:47.58:0,48,275	0/0:10,0:10:21.14:0,21,113	1/1:2,13:15:39.13:648,39,0	1/1:0,28:29:83.65:1375,84,0	0/0:23,0:23:25.14:0,25,270	1/1:0,8:8:9.03:154,9,0
chr10	49935660	.	A	AT	11001.27	PASS	AB=1.000;AC=33;AF=0.589;AN=56;BaseQRankSum=-13.697;DP=481;FS=13.553;HRun=5;HaplotypeScore=39.3756;InbreedingCoeff=0.9528;MQ=69.50;MQ0=0;MQRankSum=-2.364;QD=34.38;ReadPosRankSum=-0.329;VQSLOD=3.5304;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,16:19:45.15:586,45,0	0/0:5,0:5:15.04:0,15,161	0/0:6,0:6:15.01:0,15,150	0/1:4,0:4:1.30:1,0,51	1/1:4,24:28:69.18:888,69,0	0/0:21,0:21:60.15:0,60,645	0/0:15,0:15:45.09:0,45,474	1/1:3,23:26:69.22:908,69,0	0/0:11,0:11:33.06:0,33,346	1/1:1,27:28:81.26:1066,81,0	1/1:1,17:18:48.11:612,48,0	0/0:15,0:15:45.11:0,45,484	0/0:18,0:18:51.13:0,51,548	1/1:0,16:16:45.15:592,45,0	0/0:19,0:19:51.13:0,51,548	1/1:1,12:13:36.12:474,36,0	1/1:3,8:11:24.08:316,24,0	1/1:0,16:16:48.16:630,48,0	1/1:2,22:24:66.17:835,66,0	1/1:1,25:26:69.18:888,69,0	1/1:1,10:11:30.10:394,30,0	0/0:14,0:14:39.07:0,39,404	0/0:19,0:19:51.10:0,51,538	0/0:18,0:18:54.13:0,54,574	1/1:1,13:14:39.13:513,39,0	1/1:2,26:28:78.23:997,78,0	1/1:3,25:27:69.22:907,69,0	1/1:0,10:10:30.10:395,30,0
chr10	49937270	.	A	AT	11596.54	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=-4.087;DP=575;FS=1.523;HRun=7;HaplotypeScore=61.6878;InbreedingCoeff=0.9985;MQ=64.67;MQ0=0;MQRankSum=-3.438;QD=31.34;ReadPosRankSum=2.032;VQSLOD=5.0832;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,30:31:69.16:816,69,0	0/0:13,0:13:30.04:0,30,290	0/0:11,0:8:20.52:0,21,179	0/0:14,0:13:32.78:0,33,296	1/1:2,25:27:72.22:870,72,0	0/0:25,0:25:63.07:0,63,603	0/0:16,0:16:42.06:0,42,406	1/1:3,26:30:81.22:963,81,0	0/0:13,0:13:27.04:0,27,261	1/1:2,16:18:48.15:580,48,0	1/1:1,25:26:75.23:906,75,0	0/0:19,0:19:48.07:0,48,463	0/0:19,0:19:48.06:0,48,457	1/1:0,22:22:54.10:634,54,0	0/0:18,0:18:42.05:0,42,400	1/1:3,20:23:57.17:689,57,0	1/1:2,29:31:81.25:979,81,0	1/1:2,17:19:48.15:580,48,0	1/1:2,17:19:48.13:567,48,0	1/1:2,15:17:45.05:511,45,0	1/1:1,12:13:36.11:435,36,0	0/0:12,0:12:36.03:0,36,337	0/0:18,0:18:45.03:0,45,421	0/0:27,0:27:69.06:0,69,657	1/1:1,28:29:81.25:979,81,0	1/1:0,27:27:78.23:930,78,0	1/1:0,27:27:75.23:906,75,0	1/1:4,7:10:21.06:254,21,0
chr10	49938169	.	AGAGAG	A	2345.53	PASS	AB=0.996;AC=18;AF=0.321;AN=56;BaseQRankSum=5.321;DP=625;FS=12.419;HRun=0;HaplotypeScore=106.1855;InbreedingCoeff=0.1364;MQ=48.22;MQ0=68;MQRankSum=-2.112;QD=8.78;ReadPosRankSum=-0.031;VQSLOD=1.4962;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:24:13.03:97,13,0	0/1:8,0:8:43.41:43,0,135	0/0:55,0:10:16.86:0,17,183	0/0:82,0:20:32.87:0,33,507	0/1:16,0:15:36.44:111,0,36	0/0:16,0:15:32.96:0,33,586	0/0:24,0:23:53.97:0,54,1123	0/1:21,0:21:99:457,0,187	0/0:21,0:21:36.59:0,37,616	0/1:18,0:15:49.83:50,0,355	0/0:11,0:10:5.88:0,6,79	0/0:16,0:16:33.56:0,34,507	0/0:13,0:13:36.08:0,36,628	0/0:14,0:14:9.36:0,9,170	0/1:25,0:22:99:146,0,353	0/1:23,0:21:23.76:80,0,24	0/1:31,0:24:99:228,0,342	0/0:26,0:20:28.65:0,29,436	1/1:5,4:5:12.02:176,12,0	1/1:6,20:22:30.06:511,30,0	0/0:19,0:14:2.03:0,2,165	0/0:16,0:15:30.10:0,30,434	0/0:12,0:12:21.54:0,22,315	0/0:32,0:32:40.79:0,41,929	0/1:16,0:13:99:101,0,116	0/1:22,0:20:7.81:8,0,368	1/1:8,10:14:22.95:380,23,0	0/1:7,0:6:32.88:135,0,33
chr10	49938171	.	AGAG	A	2711.59	PASS	AB=0.995;AC=20;AF=0.357;AN=56;BaseQRankSum=5.732;DP=623;FS=6.676;HRun=0;HaplotypeScore=91.8198;InbreedingCoeff=0.2109;MQ=48.29;MQ0=66;MQRankSum=-0.419;QD=9.65;ReadPosRankSum=1.055;VQSLOD=2.2073;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,21:23:20.88:315,21,0	0/1:8,0:8:56.17:56,0,94	0/0:60,0:9:19.87:0,20,221	0/0:80,0:20:32.74:0,33,504	0/1:17,0:16:21.98:151,0,22	0/0:16,0:15:32.69:0,33,483	0/0:24,0:23:53.62:0,54,914	0/1:21,0:21:99:515,0,103	0/0:22,0:22:39.49:0,39,556	0/1:17,0:14:77.67:78,0,239	0/0:11,0:10:5.84:0,6,57	0/0:15,0:15:33.58:0,34,484	0/0:14,0:14:39.13:0,39,589	0/0:13,0:13:5.74:0,6,96	0/1:24,0:21:99:146,0,232	1/1:6,18:20:26.64:499,27,0	0/1:30,0:23:99:289,0,197	0/0:26,0:20:29.02:0,29,299	1/1:10,0:6:12.01:129,12,0	1/1:26,0:22:28.89:283,29,0	0/1:17,0:13:1.08:1,0,78	0/0:16,0:15:30.10:0,30,404	0/0:12,0:12:21.54:0,22,297	0/0:33,0:33:53.11:0,53,854	0/1:16,0:13:73.31:108,0,73	0/1:22,0:20:17.27:17,0,257	1/1:18,0:14:11.19:172,11,0	0/1:6,0:6:23.39:136,0,23
chr10	49938173	.	AG	A	2278.35	PASS	AB=0.745;AC=21;AF=0.375;AN=56;BaseQRankSum=6.326;DP=627;FS=7.731;HRun=1;HaplotypeScore=82.8314;InbreedingCoeff=0.2731;MQ=48.38;MQ0=67;MQRankSum=-1.529;QD=8.11;ReadPosRankSum=2.726;VQSLOD=0.8667;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:23,1:23:17.82:143,18,0	0/1:5,3:8:48.61:49,0,71	0/0:66,0:12:25.88:0,26,287	0/0:78,1:20:32.87:0,33,503	0/1:8,9:16:4.24:189,0,4	0/0:16,0:15:32.89:0,33,427	0/0:23,0:22:49.79:0,50,681	0/1:5,17:22:99:571,0,100	0/0:21,0:21:38.77:0,39,447	0/1:16,1:14:80.15:80,0,184	0/0:10,0:9:9.09:0,9,40	0/0:15,0:15:33.11:0,33,432	0/0:15,0:15:42.12:0,42,528	0/0:12,1:13:3.44:0,3,44	0/1:13,9:20:99:183,0,134	1/1:24,0:20:26.45:216,26,0	0/1:19,10:23:99:301,0,133	0/0:25,1:20:20.08:0,20,194	1/1:9,1:6:11.89:102,12,0	1/1:26,0:22:14.05:190,14,0	1/1:17,0:13:4.55:14,5,0	0/0:17,0:16:30.09:0,30,373	0/0:12,0:12:21.54:0,22,275	0/0:33,0:33:49.63:0,50,685	0/1:10,6:13:26.86:115,0,27	0/1:20,1:20:81.75:82,0,213	1/1:17,1:14:12.61:96,13,0	0/1:3,3:6:23.06:136,0,23
chr10	49938174	.	G	GA	2644.92	PASS	AB=0.782;AC=25;AF=0.446;AN=56;BaseQRankSum=6.840;DP=634;FS=1.448;HRun=1;HaplotypeScore=83.7725;InbreedingCoeff=0.1807;MQ=49.72;MQ0=67;MQRankSum=-1.509;QD=7.92;ReadPosRankSum=2.207;VQSLOD=0.9972;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:24:15.85:96,16,0	0/1:6,0:8:66.47:67,0,66	0/0:69,0:13:25.63:0,26,281	0/0:79,0:20:32.36:0,32,500	1/1:14,2:15:17.53:210,18,0	0/0:16,0:15:32.86:0,33,391	0/0:22,0:21:50.49:0,50,621	0/1:22,0:22:49.62:542,0,50	0/0:21,0:21:32.05:0,32,354	0/1:8,8:13:99:121,0,149	1/1:0,1:10:6.73:28,7,0	0/0:14,0:14:33.08:0,33,405	0/0:15,0:15:40.66:0,41,486	0/1:3,0:14:12.09:36,0,12	0/1:20,4:21:99:189,0,122	1/1:23,1:20:23.01:113,23,0	0/1:21,7:23:48.33:378,0,48	0/1:9,5:20:43.24:43,0,170	1/1:9,0:6:11.50:105,12,0	0/1:23,4:23:12.51:123,0,13	1/1:6,11:12:9.50:131,10,0	0/0:17,0:16:29.31:0,29,350	0/0:14,0:14:18.53:0,19,230	0/0:33,0:33:53.11:0,53,557	0/1:11,4:13:36.35:196,0,36	0/1:10,4:23:99:251,0,112	1/1:15,2:13:16.72:75,17,0	0/1:5,0:6:23.05:136,0,23
chr10	49939122	.	AT	A	1454.90	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.487;DP=702;FS=1.601;HRun=9;HaplotypeScore=88.9585;InbreedingCoeff=0.9601;MQ=77.22;MQ0=3;MQRankSum=-2.341;QD=21.09;ReadPosRankSum=0.908;VQSLOD=4.1056;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,35:38:86.01:915,86,0	0/0:5,0:5:12.04:0,12,138	0/0:46,0:37:57.54:0,58,524	0/0:52,0:29:10.42:0,10,342	0/0:19,1:20:29.70:0,30,596	0/0:27,0:27:81.21:0,81,913	0/0:31,0:31:72.21:0,72,831	0/0:28,0:28:63.17:0,63,709	0/0:13,0:13:36.11:0,36,413	0/0:27,0:27:66.09:0,66,740	0/0:10,0:10:30.08:0,30,337	0/0:21,0:21:57.10:0,57,632	0/0:17,0:17:45.13:0,45,517	0/0:24,1:25:44.76:0,45,736	0/0:29,0:29:81.23:0,81,926	1/1:3,28:31:53.45:662,53,0	0/0:36,0:36:99:0,105,1197	0/0:29,0:29:87.24:0,87,989	0/0:20,0:20:45.12:0,45,511	0/0:20,0:20:57.17:0,57,658	0/0:31,0:31:87.20:0,87,972	0/0:13,0:13:33.09:0,33,373	0/0:14,0:14:33.10:0,33,381	0/0:39,0:39:96.29:0,96,1108	0/0:17,0:17:39.10:0,39,438	0/0:23,0:23:60.17:0,60,683	0/0:30,0:30:75.22:0,75,863	0/0:7,0:7:21.05:0,21,231
chr10	49939829	.	CT	C	3591.85	PASS	AB=0.782;AC=28;AF=0.500;AN=56;BaseQRankSum=2.729;DP=563;FS=8.045;HRun=12;HaplotypeScore=77.5469;InbreedingCoeff=0.6772;MQ=73.54;MQ0=1;MQRankSum=-2.704;QD=11.30;ReadPosRankSum=4.521;VQSLOD=3.0413;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,0:29:35.17:107,35,0	1/1:1,6:7:14.94:116,15,0	0/1:12,1:12:7.42:7,0,49	0/1:15,4:20:39.71:64,0,40	0/1:3,13:17:20.01:220,0,20	0/0:21,1:23:31.92:0,32,465	0/0:17,2:20:5.33:0,5,385	0/0:17,1:38:40.95:0,41,342	0/0:11,0:12:27.52:0,28,270	1/1:11,22:35:69.70:516,70,0	1/1:5,12:18:1.42:184,1,0	0/0:13,0:13:33.02:0,33,311	0/0:18,0:22:29.27:0,29,443	1/1:2,12:14:29.17:231,29,0	1/1:1,24:25:59.60:464,60,0	1/1:2,0:19:32.59:94,33,0	1/1:3,18:24:53.91:388,54,0	1/1:4,19:24:25.41:370,25,0	0/1:8,2:19:12.34:12,0,128	0/0:6,0:16:20.56:0,21,93	0/0:4,0:13:18.45:0,18,99	0/0:22,0:24:56.77:0,57,541	0/0:17,1:19:18.64:0,19,340	0/0:12,0:12:33.06:0,33,329	1/1:1,11:13:25.94:192,26,0	1/1:7,16:24:19.37:323,19,0	0/0:9,0:32:61.18:0,61,360	1/1:2,13:15:38.83:302,39,0
chr10	49939999	.	A	ACG	16078.99	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=15.938;DP=593;FS=0.639;HRun=0;HaplotypeScore=91.4681;InbreedingCoeff=0.9998;MQ=83.54;MQ0=0;MQRankSum=-7.811;QD=50.25;ReadPosRankSum=2.505;VQSLOD=5.9602;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:54.18:0,54,878	0/0:10,0:10:30.10:0,30,489	0/0:21,0:21:60.02:0,60,841	0/0:18,0:18:51.17:0,51,815	1/1:2,24:27:66.23:1318,66,0	0/0:24,0:24:72.21:0,72,1122	0/0:18,0:18:54.18:0,54,878	1/1:6,26:36:99:1867,105,0	0/0:23,0:23:69.24:0,69,1119	1/1:2,23:25:66.23:1308,66,0	1/1:2,23:25:63.22:1267,63,0	0/0:17,0:17:51.14:0,51,779	0/0:20,0:20:60.19:0,60,949	1/1:2,20:22:57.20:1135,57,0	0/0:22,0:22:66.23:0,66,1074	0/0:22,0:22:66.18:0,66,1003	1/1:1,15:16:36.12:725,36,0	1/1:2,13:15:39.13:776,39,0	1/1:7,6:14:36.10:657,36,0	1/1:5,32:38:84.29:1694,84,0	1/1:1,16:18:45.15:893,45,0	0/0:22,0:22:63.22:0,63,1023	0/0:24,0:24:69.24:0,69,1125	0/0:14,0:14:42.14:0,42,685	1/1:2,13:16:33.11:666,33,0	1/1:1,23:24:69.24:1385,69,0	1/1:0,30:29:78.27:1570,78,0	1/1:1,13:14:42.14:816,42,0
chr10	49942119	.	G	GTT	11280.99	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-11.883;DP=621;FS=5.669;HRun=10;HaplotypeScore=79.5593;InbreedingCoeff=0.9929;MQ=76.71;MQ0=0;MQRankSum=-0.348;QD=32.05;ReadPosRankSum=-2.459;VQSLOD=4.5629;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:0,0:22:52.15:0,52,225	0/0:9,0:10:29.81:0,30,286	0/0:17,0:16:17:0,17,209	0/0:19,0:17:20.49:0,20,188	1/1:2,18:22:57.50:754,57,0	0/0:35,0:35:90.16:0,90,915	0/0:11,0:12:26.77:0,27,256	1/1:8,22:33:73.04:987,73,0	0/0:14,0:14:42.06:0,42,417	1/1:5,23:33:77.69:1031,78,0	1/1:6,18:28:65.53:816,66,0	0/0:23,0:23:63.12:0,63,633	0/0:23,0:23:54.11:0,54,549	1/1:5,18:23:47.91:709,48,0	0/0:29,0:29:66.09:0,66,671	0/0:0,0:16:36.97:0,37,164	1/1:4,21:29:76.15:974,76,0	1/1:2,9:11:24.08:357,24,0	1/1:2,9:13:32.58:415,33,0	1/1:6,32:39:98.59:1367,99,0	1/1:3,9:13:26.58:367,27,0	0/0:15,0:15:32.96:0,33,318	0/0:21,0:21:54.10:0,54,549	0/0:12,0:12:30.02:0,30,294	1/1:4,18:25:54.16:749,54,0	1/1:5,34:40:99:1442,105,0	1/1:3,31:38:83.20:1134,83,0	1/1:1,4:5:12.04:179,12,0
chr10	49942210	.	CTAA	C	13014.11	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=5.418;DP=679;FS=2.567;HRun=0;HaplotypeScore=97.9370;InbreedingCoeff=0.9979;MQ=68.56;MQ0=6;MQRankSum=-1.830;QD=37.50;ReadPosRankSum=-0.133;VQSLOD=5.5645;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:72.66:0,73,1102	0/0:10,0:10:30.10:0,30,642	0/0:28,0:23:65.48:0,65,787	0/0:28,0:21:20:0,20,494	1/1:18,11:29:75.20:1195,75,0	0/0:35,0:35:99:0,102,1762	0/0:24,0:24:72.16:0,72,1205	1/1:2,23:23:66.06:848,66,0	0/0:16,0:16:48.07:0,48,901	1/1:20,4:24:69.17:1002,69,0	1/1:21,7:28:66.18:1018,66,0	0/0:25,0:25:75.21:0,75,1487	0/0:24,0:24:53.24:0,53,1426	1/1:11,8:19:26.16:799,26,0	0/0:27,0:27:81.23:0,81,1647	0/0:28,0:28:81.23:0,81,1588	1/1:14,12:26:78.17:1152,78,0	1/1:1,15:16:21.07:368,21,0	1/1:1,13:13:39.06:559,39,0	1/1:28,14:42:99:1767,117,0	1/1:1,25:25:30.10:527,30,0	0/0:19,0:19:54.14:0,54,1067	0/0:24,0:24:69.16:0,69,1240	0/0:18,0:18:51.13:0,51,949	1/1:18,7:25:63.15:955,63,0	1/1:22,10:32:93.16:1380,93,0	1/1:17,11:28:69.18:1082,69,0	1/1:0,13:13:21.07:363,21,0
chr10	49942924	.	C	CACATACATACAT	6002.46	PASS	AB=1.000;AC=26;AF=0.542;AN=48;BaseQRankSum=1.885;DP=718;FS=1.963;HRun=0;HaplotypeScore=254.5715;InbreedingCoeff=0.6842;MQ=60.41;MQ0=5;MQRankSum=-8.889;QD=16.09;ReadPosRankSum=-2.744;VQSLOD=3.0010;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:29:3.01:162,3,0	1/1:5,0:8:3.01:76,3,0	./.	./.	1/1:20,7:31:0.47:1,0,0	0/0:16,0:16:27.09:0,27,855	0/1:25,0:25:56.76:57,0,465	1/1:48,0:46:8.91:61,9,0	0/0:18,0:19:33.11:0,33,1019	1/1:17,0:27:36.09:859,36,0	./.	0/0:29,0:29:54.15:0,54,1624	0/0:12,0:26:33.11:0,33,916	1/1:13,0:26:15.05:380,15,0	1/1:23,13:37:12.04:693,12,0	./.	1/1:30,0:30:16.96:525,17,0	0/1:13,0:13:20.94:218,0,21	1/1:17,0:21:2:45,2,0	0/0:13,0:27:17.10:0,17,39	0/0:17,0:29:12.44:0,12,28	0/0:12,0:12:27.07:0,27,706	0/0:24,0:24:42.13:0,42,1339	0/0:28,0:28:27.06:0,27,751	1/1:16,0:36:19.05:530,19,0	1/1:20,0:28:39.04:1528,39,0	0/0:7,0:25:12.18:0,12,29	1/1:9,4:13:15.05:867,15,0
chr10	49942958	.	C	CATACATACATAT	2945.12	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=4.271;DP=752;FS=2.796;HRun=0;HaplotypeScore=243.9989;InbreedingCoeff=-0.0109;MQ=58.76;MQ0=10;MQRankSum=-7.692;QD=9.32;ReadPosRankSum=3.359;VQSLOD=2.3845;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:5,19:35:3.01:179,3,0	0/1:6,0:6:17.98:60,0,18	0/0:19,0:15:18.18:0,18,269	0/0:10,0:5:2.06:0,2,38	0/0:33,0:33:26.72:0,27,218	0/0:21,0:21:57.04:0,57,1182	0/0:25,0:25:58.62:0,59,932	0/0:46,0:41:84.71:0,85,697	0/0:19,0:19:57.01:0,57,1307	0/1:27,0:27:99:502,0,238	0/0:25,0:25:26.97:0,27,224	0/0:33,0:33:88.39:0,88,2066	0/0:27,0:26:57.08:0,57,1167	0/1:29,0:29:99:284,0,242	0/1:42,0:42:99:417,0,294	1/1:0,32:37:3.40:18,3,0	0/1:34,0:34:99:114,0,279	0/1:18,0:18:6.96:7,0,184	0/0:23,0:20:31.16:0,31,336	0/0:27,0:26:54.16:0,54,328	0/0:23,0:23:39.78:0,40,228	0/0:14,0:14:39.07:0,39,913	0/0:34,0:34:92.92:0,93,1856	0/0:25,0:25:60.02:0,60,1115	0/1:43,0:43:99:381,0,381	0/1:30,0:30:99:402,0,405	0/0:32,0:32:69.12:0,69,446	0/1:15,0:15:99:732,0,168
chr10	49943791	.	A	AG	16264.50	PASS	AB=1.000;AC=33;AF=0.589;AN=56;BaseQRankSum=10.288;DP=753;FS=4.611;HRun=4;HaplotypeScore=100.3476;InbreedingCoeff=0.9502;MQ=80.54;MQ0=0;MQRankSum=-0.133;QD=34.39;ReadPosRankSum=0.705;VQSLOD=4.8083;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,39:42:99:1395,102,0	0/0:20,0:20:54.11:0,54,584	0/0:19,1:19:22.15:0,22,428	0/1:19,0:20:3.04:3,0,368	1/1:0,27:27:75.25:1015,75,0	0/0:27,0:27:72.20:0,72,817	0/0:19,0:19:51.13:0,51,569	1/1:4,32:36:96.32:1314,96,0	0/0:33,0:33:99:0,99,1122	1/1:2,28:30:84.26:1130,84,0	1/1:0,25:25:69.23:938,69,0	0/0:39,0:39:99:0,108,1216	0/0:28,0:28:84.22:0,84,936	1/1:3,32:35:56.26:1155,56,0	0/0:31,0:31:93.27:0,93,1055	1/1:3,27:30:72.07:985,72,0	1/1:1,16:17:48.16:657,48,0	1/1:2,18:20:48.16:657,48,0	1/1:1,14:15:42.14:574,42,0	1/1:4,29:33:90.30:1226,90,0	1/1:0,28:28:81.27:1108,81,0	0/0:22,0:22:66.17:0,66,739	0/0:22,0:22:60.17:0,60,680	0/0:19,0:19:51.13:0,51,567	1/1:1,30:31:78.26:1067,78,0	1/1:3,31:34:96.27:1285,96,0	1/1:4,35:41:99:1428,105,0	1/1:1,8:9:24.08:328,24,0
chr10	49944005	.	CGT	C	3059.09	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.545;DP=764;FS=0.989;HRun=0;HaplotypeScore=87.9330;InbreedingCoeff=0.9958;MQ=89.99;MQ0=0;MQRankSum=-6.290;QD=42.49;ReadPosRankSum=3.187;VQSLOD=5.0142;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,42:42:99:1811,111,0	0/0:15,0:15:45.14:0,45,865	0/0:35,0:35:99:0,105,1999	0/0:29,0:29:82.81:0,83,1530	0/0:30,0:30:90.23:0,90,1674	0/0:17,0:17:51.18:0,51,1035	0/0:24,0:24:72.25:0,72,1461	0/0:31,0:31:93.32:0,93,1887	0/0:24,0:24:72.25:0,72,1459	0/0:25,0:25:75.17:0,75,1329	0/0:15,0:15:45.14:0,45,848	0/0:47,0:47:99:0,141,2836	0/0:33,0:33:99:0,99,1990	0/0:15,0:15:45.15:0,45,914	0/0:42,0:42:99:0,126,2523	1/1:0,30:30:84.29:1370,84,0	0/0:43,0:43:99:0,129,2580	0/0:26,0:26:78.18:0,78,1465	0/0:18,0:18:54.18:0,54,1051	0/0:27,0:27:81.26:0,81,1600	0/0:29,0:29:87.28:0,87,1729	0/0:17,0:17:51.18:0,51,1035	0/0:21,0:21:63.20:0,63,1219	0/0:36,0:36:99:0,108,2137	0/0:21,0:21:63.18:0,63,1239	0/0:34,0:34:99:0,102,2012	0/0:32,0:32:96.31:0,96,1861	0/0:6,0:6:18.06:0,18,364
chr10	49944524	.	G	GA	2941.92	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=11.626;DP=766;FS=4.880;HRun=3;HaplotypeScore=76.2503;InbreedingCoeff=0.9979;MQ=92.75;MQ0=0;MQRankSum=-5.556;QD=34.21;ReadPosRankSum=4.467;VQSLOD=4.2727;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,50:53:99:1847,132,0	0/0:7,0:7:21.06:0,21,252	0/0:34,0:34:90.24:0,90,1058	0/0:30,0:30:75.22:0,75,882	0/0:27,0:27:78.24:0,78,935	0/0:31,0:30:84.26:0,84,1008	0/0:30,0:30:84.24:0,84,996	0/0:40,0:40:99:0,108,1268	0/0:29,0:29:81.24:0,81,961	0/0:26,0:26:78.24:0,78,936	0/0:19,0:19:54.16:0,54,648	0/0:26,0:26:78.23:0,78,925	0/0:26,0:26:78.24:0,78,936	0/0:30,0:30:84.26:0,84,1008	0/0:36,0:36:99:0,105,1260	1/1:3,30:33:87.29:1217,87,0	0/0:34,0:34:99:0,102,1220	0/0:17,0:17:51.14:0,51,600	0/0:19,0:19:54.17:0,54,648	0/0:17,0:17:51.14:0,51,601	0/0:23,0:23:69.20:0,69,816	0/0:26,0:26:78.24:0,78,936	0/0:25,0:25:72.20:0,72,841	0/0:22,0:22:57.16:0,57,672	0/0:33,0:33:96.29:0,96,1151	0/0:35,0:35:99:0,99,1179	0/0:25,0:25:72.22:0,72,864	0/0:13,0:13:39.12:0,39,468
chr10	49945003	.	AT	A	2311.39	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.133;DP=814;FS=1.042;HRun=1;HaplotypeScore=78.0332;InbreedingCoeff=0.9959;MQ=89.46;MQ0=0;MQRankSum=-5.014;QD=37.28;ReadPosRankSum=2.572;VQSLOD=4.2846;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,35:35:99:1426,102,0	0/0:20,0:20:60.20:0,60,957	0/0:27,0:27:75.22:0,75,1108	0/0:35,0:35:93.26:0,93,1399	0/0:30,0:30:90.31:0,90,1429	0/0:36,0:36:99:0,105,1676	0/0:23,0:23:69.22:0,69,1078	0/0:33,0:33:99:0,99,1541	0/0:29,0:29:84.29:0,84,1343	0/0:38,0:38:99:0,114,1820	0/0:21,0:21:60.20:0,60,954	0/0:34,0:34:99:0,102,1581	0/0:37,0:37:99:0,111,1747	0/0:26,0:26:78.25:0,78,1220	0/0:48,0:48:99:0,144,2254	1/1:0,27:27:72.24:1007,72,0	0/0:25,0:25:68.24:0,68,1144	0/0:19,0:19:54.16:0,54,838	0/0:14,0:14:42.14:0,42,670	0/0:27,0:27:81.26:0,81,1267	0/0:34,0:34:99:0,102,1603	0/0:45,0:45:99:0,129,2062	0/0:27,0:27:78.24:0,78,1195	0/0:27,0:27:75.24:0,75,1161	0/0:22,0:22:66.22:0,66,1050	0/0:33,0:33:99:0,99,1582	0/0:36,0:36:99:0,108,1723	0/0:6,0:6:18.06:0,18,288
chr10	49945926	.	G	GATAT	1934.94	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-6.680;DP=577;FS=4.958;HRun=0;HaplotypeScore=98.7910;InbreedingCoeff=0.9854;MQ=83.62;MQ0=1;MQRankSum=0.182;QD=43.98;ReadPosRankSum=2.083;VQSLOD=3.7323;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,26:31:51.18:1344,51,0	0/0:10,0:10:27.07:0,27,436	0/0:20,0:17:17.85:0,18,285	0/0:37,0:24:34.06:0,34,472	0/0:42,0:42:99:0,120,1943	0/0:22,0:22:66.21:0,66,1175	0/0:11,0:11:27.09:0,27,494	0/0:31,0:31:87.25:0,87,1406	0/0:14,0:14:42.12:0,42,733	0/0:18,0:18:54.12:0,54,823	0/0:22,0:22:57.17:0,57,986	0/0:14,0:14:42.13:0,42,728	0/0:7,0:7:18.01:0,18,238	0/0:21,0:21:63.19:0,63,1097	0/0:21,0:21:60.16:0,60,1012	1/1:1,12:13:27.09:713,27,0	0/0:17,0:17:45.10:0,45,733	0/0:21,0:21:54.12:0,54,865	0/0:19,0:19:45.14:0,45,766	0/0:32,0:32:96.27:0,96,1637	0/0:13,0:13:36.09:0,36,600	0/0:10,0:10:30.06:0,30,454	0/0:22,0:22:66.13:0,66,1022	0/0:20,0:20:57.09:0,57,876	0/0:23,0:23:63.16:0,63,1016	0/0:24,0:24:69.20:0,69,1154	0/0:33,0:33:87.25:0,87,1505	0/0:9,0:9:18.04:0,18,299
chr10	49946100	.	T	TA	2331.31	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=11.218;DP=659;FS=10.123;HRun=3;HaplotypeScore=65.4890;InbreedingCoeff=0.9918;MQ=84.82;MQ0=0;MQRankSum=-3.079;QD=32.38;ReadPosRankSum=1.654;VQSLOD=3.6267;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,51:52:99:1777,126,0	0/0:12,0:12:36.11:0,36,486	0/0:20,0:20:54.13:0,54,692	0/0:23,0:23:63.14:0,63,812	0/0:25,0:25:66.20:0,66,899	0/0:24,0:23:72.22:0,72,988	0/0:34,0:34:99:0,102,1408	0/0:34,0:34:99:0,102,1411	0/0:24,0:24:72.23:0,72,987	0/0:24,0:24:72.24:0,72,1007	0/0:20,0:20:57.19:0,57,797	0/0:27,0:27:78.23:0,78,1053	0/0:15,0:15:45.15:0,45,628	0/0:20,0:20:60.20:0,60,839	0/0:20,0:20:60.19:0,60,821	1/1:0,20:20:48.16:676,48,0	0/0:32,0:31:93.26:0,93,1244	0/0:21,0:21:63.21:0,63,879	0/0:18,0:18:54.16:0,54,722	0/0:22,0:22:66.22:0,66,922	0/0:25,0:25:75.23:0,75,1030	0/0:20,0:20:60.20:0,60,834	0/0:21,0:21:63.14:0,63,838	0/0:25,0:25:75.25:0,75,1049	0/0:19,0:19:57.19:0,57,794	0/0:27,0:27:80.94:0,81,1100	0/0:29,0:29:87.28:0,87,1198	0/0:6,0:6:15.05:0,15,210
chr10	49946336	.	AT	A	6672.35	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=15.505;DP=671;FS=0.628;HRun=8;HaplotypeScore=70.9722;InbreedingCoeff=0.9944;MQ=77.71;MQ0=0;MQRankSum=-0.477;QD=24.35;ReadPosRankSum=3.288;VQSLOD=5.5849;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,36:39:96.15:926,96,0	0/0:12,0:12:36.11:0,36,435	0/0:24,0:20:24.50:0,25,474	0/0:24,1:23:11.38:0,11,404	1/1:3,24:27:66.03:626,66,0	0/0:25,0:25:72.22:0,72,868	0/0:21,0:21:57.17:0,57,678	0/0:34,0:34:93.27:0,93,1104	0/0:20,1:21:28.20:0,28,623	1/1:2,32:34:90.12:862,90,0	1/1:1,20:21:45.06:435,45,0	0/0:24,0:24:66.18:0,66,774	0/0:27,0:27:78.21:0,78,913	1/1:4,17:21:45.07:435,45,0	0/0:24,0:24:69.19:0,69,810	1/1:1,17:18:48.08:464,48,0	1/1:0,32:32:87.14:840,87,0	1/1:1,26:27:72.11:695,72,0	0/0:28,0:28:75.19:0,75,870	0/0:23,0:23:54.16:0,54,642	0/0:17,0:17:48.12:0,48,556	0/0:18,0:18:54.16:0,54,643	0/0:20,0:20:60.18:0,60,724	0/0:25,0:25:66.18:0,66,775	1/1:0,19:19:45.07:435,45,0	1/1:1,24:25:72.12:695,72,0	0/0:29,0:29:81.25:0,81,977	1/1:0,11:11:27.04:261,27,0
chr10	49947323	.	GCAAA	G	1504.13	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=5.176;DP=547;FS=16.378;HRun=0;HaplotypeScore=103.5975;InbreedingCoeff=0.8291;MQ=71.70;MQ0=4;MQRankSum=-5.240;QD=19.53;ReadPosRankSum=1.097;VQSLOD=1.8321;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,27:25:38.95:678,39,0	0/0:16,0:16:48.10:0,48,933	0/0:39,0:11:26.21:0,26,236	0/1:24,0:15:3.98:4,0,232	0/0:19,0:19:48.77:0,49,927	0/0:22,0:22:66.19:0,66,1601	0/0:16,0:16:45.14:0,45,1010	0/0:24,0:24:72.19:0,72,1348	0/0:24,0:24:72.18:0,72,1594	0/0:15,0:15:43:0,43,842	0/0:11,0:11:27.08:0,27,593	0/0:17,0:17:51.09:0,51,942	0/0:19,0:19:56.95:0,57,1111	0/0:14,0:14:36.03:0,36,488	0/0:15,0:15:42.10:0,42,928	1/1:0,18:21:51.12:947,51,0	0/0:12,0:12:18.84:0,19,466	0/0:21,0:21:38.99:0,39,617	0/0:7,0:7:21.06:0,21,459	0/0:25,0:24:66.16:0,66,1303	0/0:12,0:12:30.04:0,30,511	0/0:25,0:25:72.17:0,72,1488	0/0:16,0:16:48.07:0,48,915	0/0:18,0:18:54.12:0,54,1290	0/0:19,0:19:33.03:0,33,468	0/0:22,0:22:66.14:0,66,1309	0/0:22,0:22:38.45:0,38,571	0/0:20,0:20:45.07:0,45,886
chr10	49947324	.	C	CAA	3832.38	PASS	AB=0.931;AC=28;AF=0.500;AN=56;BaseQRankSum=1.158;DP=591;FS=1.380;HRun=14;HaplotypeScore=102.7336;InbreedingCoeff=0.8002;MQ=70.67;MQ0=6;MQRankSum=2.624;QD=13.12;ReadPosRankSum=-2.926;VQSLOD=2.2017;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:25:30.89:0,31,139	0/0:16,0:17:26.39:0,26,205	0/0:47,0:12:2.31:0,2,14	0/1:24,0:17:2.08:16,0,2	1/1:19,0:20:31.55:330,32,0	0/0:22,0:23:53.05:0,53,404	0/0:14,0:16:32.43:0,32,253	1/1:26,1:27:55.95:627,56,0	0/0:23,0:25:52.90:0,53,408	1/1:19,0:19:42.46:424,42,0	1/1:13,0:14:5.07:244,5,0	0/0:17,0:17:26.47:0,26,209	0/0:23,0:24:27.44:0,27,220	1/1:13,0:14:0.22:56,0,0	0/0:14,0:15:17.73:0,18,192	0/0:21,0:21:47.11:0,47,214	0/1:13,0:14:11.12:91,0,11	1/1:22,1:23:23.87:202,24,0	1/1:5,1:7:18.01:190,18,0	1/1:29,0:28:57.16:565,57,0	1/1:11,3:14:12.81:119,13,0	0/0:23,0:25:50.14:0,50,386	0/0:19,0:19:26.44:0,26,206	0/0:17,0:18:38.66:0,39,333	1/1:17,1:18:11.99:107,12,0	1/1:24,0:24:28.79:341,29,0	1/1:14,7:22:18.30:179,18,0	1/1:21,0:21:33.04:341,33,0
chr10	49949440	.	TACAC	T	674.97	PASS	AB=0.851;AC=11;AF=0.196;AN=56;BaseQRankSum=3.054;DP=504;FS=7.001;HRun=0;HaplotypeScore=107.3114;InbreedingCoeff=0.6094;MQ=65.12;MQ0=7;MQRankSum=1.277;QD=5.72;ReadPosRankSum=2.648;VQSLOD=1.3690;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:18:12.50:0,12,169	1/1:5,5:10:3.01:48,3,0	0/0:31,0:18:8.89:0,9,70	0/0:26,0:16:8.94:0,9,67	0/0:6,0:16:3.01:0,3,37	0/0:22,0:22:30.42:0,30,583	0/0:13,0:13:21.06:0,21,420	0/0:24,0:23:5.45:0,5,62	0/0:16,0:16:18.06:0,18,433	0/0:9,0:18:36.11:0,36,558	0/0:16,0:22:15.04:0,15,244	0/0:18,0:18:30:0,30,738	0/0:11,0:11:17.78:0,18,324	0/0:17,0:17:12.04:0,12,197	0/1:10,10:20:6.81:42,0,7	0/0:21,0:21:30.06:0,30,403	0/0:16,0:19:23.97:0,24,293	0/0:5,0:14:3.01:0,3,57	1/1:15,0:18:19.58:214,20,0	1/1:14,0:15:11.28:177,11,0	0/1:11,0:11:1.53:46,0,2	0/0:17,0:17:27.04:0,27,502	0/0:17,0:18:33.11:0,33,751	0/1:26,1:27:0.15:0,0,822	0/0:11,0:12:21.06:0,21,350	0/0:17,0:22:32.60:0,33,512	1/1:10,1:15:21.84:300,22,0	0/0:9,0:9:15.50:0,15,216
chr10	49949473	.	ACT	A	417.87	PASS	AB=1.000;AC=24;AF=0.462;AN=52;BaseQRankSum=5.104;DP=466;FS=1.804;HRun=0;HaplotypeScore=107.6956;InbreedingCoeff=0.0024;MQ=48.35;MQ0=9;MQRankSum=1.692;QD=1.41;ReadPosRankSum=-0.497;VQSLOD=2.1456;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:20:16.39:125,16,0	1/1:8,0:8:3.03:24,3,0	./.	./.	0/0:17,0:17:9.12:0,9,47	0/1:27,0:27:9.80:10,0,341	0/1:13,0:12:2.80:3,0,232	0/0:21,0:19:53.23:0,53,359	0/0:11,9:20:25.07:0,25,303	0/1:19,0:19:15.51:16,0,173	0/0:20,0:20:14.06:0,14,75	0/0:24,0:24:6.81:0,7,457	0/1:14,0:13:8.24:8,0,182	0/1:14,0:14:9.55:10,0,27	1/1:14,0:14:4.73:28,5,0	1/1:22,0:22:0.29:94,0,0	0/0:17,0:17:3.99:0,4,132	0/1:13,0:12:16.29:16,0,50	0/1:15,0:14:51.53:52,0,73	1/1:14,0:13:12.26:60,12,0	1/1:8,0:7:5.84:36,6,0	0/0:11,6:17:18.04:0,18,247	0/1:27,0:26:24.70:25,0,356	0/0:23,0:23:11.21:0,11,424	0/1:21,0:20:5.96:6,0,161	0/1:21,0:21:1.56:2,0,257	0/1:17,0:17:14.09:37,0,14	0/1:9,0:9:27.49:27,0,75
chr10	49949478	.	CAGAGAGAGAGAG	C	536.34	PASS	AC=4;AF=0.083;AN=48;BaseQRankSum=2.649;DP=438;FS=0.000;HRun=0;HaplotypeScore=159.9387;InbreedingCoeff=0.5179;MQ=47.73;MQ0=7;MQRankSum=-3.421;QD=16.76;ReadPosRankSum=0.828;VQSLOD=2.4385;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:18:9.03:0,9,320	0/0:9,0:9:6.18:0,6,267	./.	./.	0/0:14,0:16:9.03:0,9,230	0/0:27,0:27:22.68:0,23,929	0/0:12,0:13:5.93:0,6,41	0/0:19,0:17:0:0,0,0	0/0:20,0:20:6.49:0,6,330	0/0:16,0:17:27.01:0,27,545	0/0:17,0:19:15.05:0,15,356	0/0:20,0:25:18.44:0,18,522	0/0:13,0:12:12.04:0,12,463	0/0:12,0:13:3.01:0,3,65	0/0:12,0:12:6.02:0,6,322	0/0:21,0:21:19:0,19,781	0/0:13,0:13:15.05:0,15,342	0/0:13,0:12:6.02:0,6,134	1/1:12,0:14:9.03:251,9,0	./.	./.	0/0:18,0:18:6.02:0,6,340	0/0:26,0:25:21.07:0,21,875	0/0:23,0:23:5.51:0,6,179	0/0:17,0:17:15.05:0,15,429	0/0:20,0:20:38.16:0,38,892	1/1:12,5:17:11.84:389,12,0	0/0:7,0:7:3.01:0,3,42
chr10	49950555	.	GAGATATATATATAT	G	648.12	PASS	AB=1.000;AC=7;AF=0.130;AN=54;BaseQRankSum=3.769;DP=164;FS=12.538;HRun=0;HaplotypeScore=59.8280;InbreedingCoeff=0.4543;MQ=79.25;MQ0=3;MQRankSum=-3.996;QD=21.60;ReadPosRankSum=3.670;VQSLOD=0.2950;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:1,16:16:9.03:260,9,0	1/1:1,0:1:3.01:60,3,0	0/0:9,0:8:18.87:0,19,169	0/0:14,0:9:18.24:0,18,129	0/0:1,0:1:2.99:0,3,23	0/0:10,0:10:18.02:0,18,518	0/0:3,0:3:9:0,9,264	0/0:23,0:23:69.15:0,69,1886	0/0:1,0:1:3.01:0,3,69	0/0:4,0:4:12.02:0,12,116	0/0:3,0:3:8.99:0,9,74	./.	0/0:5,0:5:15.01:0,15,383	0/0:5,0:5:12:0,12,259	0/1:6,0:6:59.94:143,0,60	1/1:1,1:6:9.03:309,9,0	0/0:9,0:9:12.01:0,12,359	0/0:6,0:6:15.02:0,15,606	0/0:3,0:3:6:0,6,52	0/0:3,0:3:8.99:0,9,75	0/0:1,0:1:3:0,3,25	0/0:4,0:4:8.99:0,9,75	0/0:1,0:1:3:0,3,25	0/0:3,0:3:8.59:0,9,59	0/0:8,0:8:24:0,24,420	0/0:5,0:4:9.02:0,9,111	0/0:5,0:5:15:0,15,317	0/0:8,0:8:24.02:0,24,800
chr10	49950557	.	GATATATATATATAT	G	622.31	PASS	AB=1.000;AC=9;AF=0.237;AN=38;BaseQRankSum=2.891;DP=164;FS=6.218;HRun=0;HaplotypeScore=60.3203;InbreedingCoeff=0.5083;MQ=77.74;MQ0=3;MQRankSum=-2.217;QD=14.47;ReadPosRankSum=1.962;VQSLOD=0.8290;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:16:9.03:208,9,0	1/1:0,1:1:3.01:78,3,0	0/0:8,0:7:0.89:0,1,2	0/1:13,0:8:0.05:1,0,0	./.	0/0:9,0:9:9.02:0,9,382	0/0:3,0:3:3.01:0,3,203	0/0:23,0:23:36.11:0,36,1491	0/0:1,0:1:3.01:0,3,56	./.	./.	./.	0/0:3,0:5:6.02:0,6,282	0/0:4,0:4:3.01:0,3,185	1/1:3,3:6:6.02:194,6,0	1/1:6,0:6:9.03:258,9,0	0/0:9,0:11:6.02:0,6,280	0/0:6,0:7:12.01:0,12,510	./.	./.	./.	./.	./.	0/0:3,0:3:0.47:0,0,1	0/0:7,0:8:6.02:0,6,235	0/0:5,0:4:3:0,3,27	0/0:5,0:5:6.02:0,6,201	0/0:8,0:11:21.54:0,22,1062
chr10	49950590	.	A	ATG	81.82	PASS	AB=1.000;AC=7;AF=0.146;AN=48;BaseQRankSum=1.340;DP=171;FS=33.991;HRun=0;HaplotypeScore=42.3721;InbreedingCoeff=0.0002;MQ=73.38;MQ0=3;MQRankSum=-2.026;QD=1.90;ReadPosRankSum=2.293;VQSLOD=0.0715;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:17:17.94:0,18,141	./.	0/0:11,0:5:5.72:0,6,49	0/1:12,0:9:22.75:23,0,65	0/0:2,0:2:5.99:0,6,50	1/1:1,7:8:6.02:116,6,0	0/0:1,0:1:3.01:0,3,46	0/0:27,0:27:51.37:0,51,637	0/1:3,0:3:0.05:0,0,39	0/0:2,0:2:6.01:0,6,56	0/0:1,0:1:3:0,3,25	0/0:7,0:7:14.98:0,15,125	0/0:4,0:4:11.86:0,12,85	0/1:5,0:5:7.34:7,0,55	0/0:7,0:7:14.96:0,15,120	0/0:7,0:7:11.99:0,12,103	0/0:15,0:15:12.92:0,13,139	0/0:8,0:8:12.94:0,13,140	./.	0/0:4,0:4:11.99:0,12,100	0/0:3,0:3:5.99:0,6,49	0/0:1,0:1:3:0,3,25	0/0:1,0:1:3:0,3,25	./.	0/1:6,0:6:6.35:6,0,87	./.	0/0:3,0:3:3:0,3,25	0/1:9,0:9:37.81:38,0,79
chr10	49950604	.	A	AG	4425.10	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-6.919;DP=228;FS=3.083;HRun=0;HaplotypeScore=32.0129;InbreedingCoeff=0.8622;MQ=83.48;MQ0=2;MQRankSum=-1.163;QD=39.16;ReadPosRankSum=0.482;VQSLOD=4.3403;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:33.10:0,33,441	0/0:4,0:4:9.03:0,9,117	0/0:19,0:14:31.89:0,32,424	0/0:18,0:15:35.98:0,36,411	1/1:0,2:2:6.02:96,6,0	0/0:7,0:7:15.05:0,15,209	0/0:5,0:5:9.03:0,9,126	1/1:2,21:23:66.22:1040,66,0	0/0:5,0:5:15.05:0,15,209	1/1:0,3:3:9.03:144,9,0	1/1:0,2:2:6.02:96,6,0	0/0:9,0:9:24.08:0,24,336	0/0:9,0:9:24.08:0,24,333	1/1:0,10:10:18.06:286,18,0	0/0:8,0:8:15.05:0,15,210	0/0:8,0:8:21.05:0,21,262	1/1:0,15:18:45.14:681,45,0	1/1:1,8:9:27.09:409,27,0	1/1:0,9:9:27.09:430,27,0	1/1:0,6:6:18.06:288,18,0	1/1:0,8:8:12.04:192,12,0	0/0:3,0:3:9.03:0,9,126	0/0:2,0:2:6.02:0,6,84	0/0:3,0:3:6.02:0,6,84	1/1:0,8:8:21.07:336,21,0	1/1:0,3:3:9.03:141,9,0	1/1:0,4:4:3.01:48,3,0	1/1:0,7:7:15.05:239,15,0
chr10	49951434	.	GT	G	1224.07	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=1.367;DP=716;FS=6.716;HRun=13;HaplotypeScore=94.7025;InbreedingCoeff=0.9195;MQ=71.07;MQ0=1;MQRankSum=1.294;QD=7.37;ReadPosRankSum=2.718;VQSLOD=2.7430;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:50:34.23:0,34,179	1/1:1,0:7:10.18:29,10,0	0/0:13,0:12:4.94:0,5,55	0/0:16,0:15:12.17:0,12,85	0/0:3,0:17:22.44:0,22,155	0/0:23,1:24:26.10:0,26,393	0/0:27,5:34:12.02:0,12,556	1/1:10,14:24:4.77:203,5,0	0/0:27,2:32:39.76:0,40,648	0/0:10,0:18:33.30:0,33,198	0/0:8,0:25:22.06:0,22,132	0/0:23,2:25:26.13:0,26,400	0/0:23,1:24:26.12:0,26,393	0/0:8,0:22:19.32:0,19,111	1/1:9,0:38:46.80:135,47,0	0/0:3,0:26:54.49:0,54,300	0/0:7,0:36:36.62:0,37,210	0/0:10,0:30:10.01:0,10,88	1/1:7,11:21:26.38:239,26,0	1/1:5,15:20:31.04:238,31,0	1/1:13,14:27:32.35:240,32,0	0/0:22,0:24:56.76:0,57,500	0/0:21,1:22:32.06:0,32,442	0/0:25,2:28:35.31:0,35,619	0/0:8,0:34:32.36:0,32,189	0/0:10,0:27:53.39:0,53,328	1/1:4,24:29:46.66:330,47,0	0/0:9,0:21:15.47:0,15,69
chr10	49953474	.	A	AAAAAAAG	1361.13	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=7.129;DP=496;FS=33.432;HRun=0;HaplotypeScore=114.6440;InbreedingCoeff=-0.0500;MQ=47.66;MQ0=21;MQRankSum=-6.670;QD=4.99;ReadPosRankSum=0.802;VQSLOD=0.2255;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,20:29:23.87:652,24,0	0/0:9,0:8:11.98:0,12,159	0/0:14,0:4:8.98:0,9,75	0/0:11,0:4:2.78:0,3,49	0/1:31,0:28:34.94:35,0,196	0/0:20,0:19:36.44:0,36,407	0/0:23,0:22:47.37:0,47,529	0/1:31,0:28:28.27:28,0,166	0/0:19,0:19:39.55:0,40,401	0/1:24,0:23:43.26:43,0,142	0/1:20,0:20:35.85:36,0,149	0/0:10,0:9:19.54:0,20,161	0/0:16,0:16:33.37:0,33,295	0/0:4,0:4:3.37:0,3,35	0/0:21,0:20:31.37:0,31,306	1/1:2,11:15:14.96:430,15,0	0/1:9,0:8:81.90:91,0,82	0/1:18,0:15:54.81:55,0,138	0/1:18,0:15:8.41:8,0,156	0/1:19,0:18:18.29:18,0,58	0/0:6,0:6:8.74:0,9,63	0/0:13,0:12:21.40:0,21,221	0/0:19,0:18:43.82:0,44,523	0/0:20,0:18:32.63:0,33,468	0/0:18,0:17:10.06:0,10,156	0/1:16,0:15:20.33:20,0,65	0/1:25,0:22:76.17:76,0,114	0/1:18,0:14:31.90:32,0,60
chr10	49953597	.	C	CTAT	4963.95	PASS	AB=0.611;AC=17;AF=0.304;AN=56;BaseQRankSum=-10.297;DP=553;FS=0.957;HRun=0;HaplotypeScore=71.1504;InbreedingCoeff=0.9360;MQ=67.83;MQ0=0;MQRankSum=1.511;QD=33.32;ReadPosRankSum=3.460;VQSLOD=4.9714;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:66.20:0,66,908	0/0:10,0:10:24.08:0,24,341	0/0:11,0:11:9.01:0,9,108	0/0:11,0:10:17.42:0,17,220	1/1:6,6:14:17.98:272,18,0	0/0:25,0:25:57.16:0,57,785	0/0:32,0:32:72.23:0,72,1003	0/0:35,0:36:72.14:0,72,945	0/0:20,0:20:45.14:0,45,618	1/1:4,13:17:39.13:790,39,0	0/1:8,13:22:0.64:707,0,1	0/0:15,0:15:30.09:0,30,407	0/0:20,0:20:33.09:0,33,448	1/1:3,3:6:12.04:232,12,0	0/0:15,0:16:27.06:0,27,363	0/0:17,0:17:48.13:0,48,646	1/1:8,17:25:42.14:850,42,0	1/1:6,15:21:30.10:608,30,0	0/0:20,0:20:36.09:0,36,490	0/0:26,0:26:33.11:0,33,470	0/0:17,0:17:39.09:0,39,515	0/0:14,0:14:27.07:0,27,364	0/0:28,0:28:51.17:0,51,727	0/0:29,0:31:57.14:0,57,770	1/1:0,7:7:18.06:365,18,0	1/1:5,9:14:27.09:532,27,0	0/0:28,0:28:51.17:0,51,727	1/1:10,13:23:30.10:608,30,0
chr10	49955541	.	GAAAA	G	1586.27	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.710;DP=641;FS=35.599;HRun=6;HaplotypeScore=101.2923;InbreedingCoeff=0.9876;MQ=88.40;MQ0=0;MQRankSum=-2.558;QD=38.69;ReadPosRankSum=1.821;VQSLOD=0.0155;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,123,3304	1/1:0,7:7:15.05:281,15,0	0/0:25,0:25:57.18:0,57,1396	0/0:23,0:23:66.18:0,66,1681	0/0:15,0:15:42.14:0,42,1134	0/0:30,0:30:87.30:0,87,2384	0/0:27,0:27:81.28:0,81,2213	0/0:25,0:25:72.23:0,72,1835	0/0:18,0:18:54.19:0,54,1445	0/0:14,0:14:42.14:0,42,1151	0/0:15,0:15:45.15:0,45,1197	0/0:18,0:18:54.19:0,54,1457	0/0:23,0:23:63.22:0,63,1722	0/0:33,0:33:96.31:0,96,2551	1/1:2,32:34:78.22:1424,78,0	0/0:24,0:24:72.22:0,72,1910	0/0:39,0:38:99:0,114,3116	0/0:17,0:17:48.16:0,48,1311	0/0:24,0:24:72.25:0,72,1943	0/0:23,0:23:66.22:0,66,1744	0/0:30,0:30:87.30:0,87,2375	0/0:27,0:27:78.27:0,78,2136	0/0:20,0:20:54.18:0,54,1437	0/0:21,0:21:63.22:0,63,1727	0/0:20,0:19:60.21:0,60,1617	0/0:21,0:21:60.20:0,60,1586	0/0:20,0:20:57.19:0,57,1441	0/0:6,0:6:18.06:0,18,482
chr10	49957154	.	CTACA	C	1948.74	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.562;DP=485;FS=6.250;HRun=0;HaplotypeScore=80.0554;InbreedingCoeff=0.9488;MQ=76.63;MQ0=1;MQRankSum=-3.356;QD=39.77;ReadPosRankSum=4.874;VQSLOD=3.6198;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,29:29:63.22:1175,63,0	0/0:9,0:9:27.09:0,27,708	0/0:18,0:18:54.19:0,54,1407	0/0:29,0:28:69.22:0,69,1708	0/0:11,0:11:27.08:0,27,630	0/0:12,0:12:27.08:0,27,640	0/0:16,0:16:45.14:0,45,1133	0/0:25,0:25:69.23:0,69,1724	0/0:12,0:12:36.12:0,36,936	0/0:10,0:10:30.10:0,30,777	0/0:4,0:4:9.03:0,9,230	0/0:22,0:22:63.22:0,63,1646	0/0:19,0:19:54.19:0,54,1407	0/0:19,0:19:42.14:0,42,1108	0/0:26,0:26:69.24:0,69,1788	1/1:1,18:19:48.16:896,48,0	0/0:32,0:32:96.33:0,96,2559	0/0:18,0:18:54.19:0,54,1409	0/0:11,0:11:30.09:0,30,699	0/0:9,0:9:27.09:0,27,709	0/0:38,0:38:99:0,108,2813	0/0:4,0:4:12.03:0,12,265	0/0:7,0:7:21.07:0,21,548	0/0:42,0:42:99:0,123,3221	0/0:10,0:10:27.09:0,27,720	0/0:13,0:13:30.10:0,30,791	0/0:13,0:13:36.12:0,36,934	0/0:7,0:7:21.07:0,21,559
chr10	49961453	.	AATAG	A	794.65	PASS	AB=1.000;AC=10;AF=0.200;AN=50;BaseQRankSum=2.446;DP=639;FS=0.000;HRun=0;HaplotypeScore=120.0644;InbreedingCoeff=0.6036;MQ=67.73;MQ0=5;MQRankSum=0.518;QD=5.80;ReadPosRankSum=-0.156;VQSLOD=2.4020;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:21,0:20:15.95:116,0,16	0/0:7,0:12:12.04:0,12,199	./.	./.	0/0:21,0:21:21.02:0,21,282	0/0:17,0:34:30.07:0,30,466	0/0:19,0:19:2.92:0,3,17	./.	1/1:9,0:16:18.02:165,18,0	0/0:22,0:22:30.07:0,30,427	0/0:25,0:25:11.96:0,12,167	0/0:23,0:23:24.05:0,24,461	0/0:30,0:30:39.11:0,39,814	0/0:15,0:15:9.03:0,9,154	1/1:11,10:21:18.06:274,18,0	0/0:17,0:17:33.09:0,33,673	0/0:13,0:13:6:0,6,68	0/0:23,0:21:5.98:0,6,72	0/0:15,0:15:6.01:0,6,90	0/0:37,0:37:51.12:0,51,1041	0/0:15,0:15:15:0,15,252	0/0:32,0:32:36.08:0,36,701	1/1:15,17:32:17.74:244,18,0	1/1:12,3:15:9.03:137,9,0	0/0:31,0:31:15.01:0,15,155	0/1:32,0:32:13.77:14,0,485	0/0:33,0:33:36.08:0,36,700	0/0:12,0:12:9.03:0,9,188
chr10	49961507	.	T	TAGATAGAA	3011.07	PASS	AB=0.893;AC=18;AF=0.321;AN=56;BaseQRankSum=1.062;DP=624;FS=0.409;HRun=0;HaplotypeScore=145.7461;InbreedingCoeff=0.5920;MQ=64.71;MQ0=9;MQRankSum=5.954;QD=12.00;ReadPosRankSum=-4.427;VQSLOD=1.1160;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:2,0:20:17.97:0,18,254	0/1:12,0:12:73.72:74,0,138	0/0:10,0:8:20.99:0,21,188	0/0:9,0:7:21.03:0,21,222	1/1:1,25:29:59.38:650,59,0	0/1:30,0:30:78.94:79,0,204	0/0:19,0:18:30.88:0,31,394	0/0:46,0:42:99:0,111,1001	0/0:14,0:14:35.45:0,35,406	0/1:7,0:28:35.40:456,0,35	1/1:1,24:29:57.63:524,58,0	0/0:16,0:16:44.98:0,45,621	0/0:23,0:23:69.06:0,69,1159	1/1:0,13:14:9.03:394,9,0	0/0:26,0:26:66:0,66,799	0/0:24,0:24:44.06:0,44,757	1/1:1,18:22:3.01:132,3,0	1/1:6,15:20:6.48:161,6,0	0/0:24,0:23:65.98:0,66,586	0/0:32,0:32:93.08:0,93,1426	0/0:14,0:14:32.99:0,33,406	0/0:24,0:24:63.05:0,63,1061	0/0:28,0:28:44.40:0,44,579	0/0:13,0:13:32.99:0,33,395	1/1:3,0:28:6.02:229,6,0	0/1:24,0:24:99:211,0,468	0/0:30,0:30:83.83:0,84,1181	1/1:12,0:13:28.87:291,29,0
chr10	49961907	.	T	TA	6231.13	PASS	AB=0.683;AC=34;AF=0.607;AN=56;BaseQRankSum=-2.627;DP=604;FS=6.177;HRun=11;HaplotypeScore=79.4470;InbreedingCoeff=0.7284;MQ=73.50;MQ0=2;MQRankSum=-1.900;QD=14.91;ReadPosRankSum=-0.305;VQSLOD=5.1447;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,3:32:63.30:347,63,0	1/1:0,7:7:21:202,21,0	0/0:25,0:22:25.16:0,25,213	0/1:25,0:17:1.74:2,0,84	0/1:7,19:27:18.79:510,0,19	0/0:25,1:28:42.16:0,42,473	0/0:17,0:17:34.85:0,35,257	1/1:10,1:27:56.63:307,57,0	0/0:16,0:18:42.88:0,43,311	1/1:4,21:25:38.61:530,39,0	1/1:2,14:16:21.75:380,22,0	0/0:16,0:16:38.81:0,39,296	0/0:18,0:18:47.81:0,48,371	1/1:2,13:15:30.53:306,31,0	1/1:3,19:22:10.64:471,11,0	1/1:4,2:19:34.42:203,34,0	0/1:12,25:36:8.64:619,0,9	1/1:4,12:16:12.96:284,13,0	1/1:6,1:20:47.94:245,48,0	1/1:3,1:23:45.93:249,46,0	1/1:5,0:17:22.60:114,23,0	0/0:21,0:23:54.87:0,55,406	0/0:26,0:28:69.78:0,70,522	0/0:13,0:13:35.78:0,36,268	0/1:3,11:14:17.97:186,0,18	1/1:6,27:34:51.41:767,51,0	1/1:4,2:21:31.76:197,32,0	1/1:5,14:19:12.84:312,13,0
chr10	49963279	.	A	AG	551.34	PASS	AB=0.929;AC=7;AF=0.125;AN=56;BaseQRankSum=0.356;DP=569;FS=6.828;HRun=0;HaplotypeScore=87.4517;InbreedingCoeff=0.1569;MQ=50.61;MQ0=39;MQRankSum=2.159;QD=3.65;ReadPosRankSum=2.379;VQSLOD=2.1780;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:24:31.29:0,31,230	0/0:4,0:4:8.73:0,9,49	0/0:27,0:10:17.46:0,17,132	0/1:37,0:12:9.24:9,0,26	0/0:31,0:30:74.55:0,75,525	0/0:21,0:18:49.91:0,50,342	0/0:15,0:14:41.04:0,41,282	0/1:14,17:30:46.45:246,0,46	0/0:11,0:10:29.23:0,29,189	0/0:21,0:20:23.27:0,23,226	0/0:21,0:19:41.82:0,42,285	0/0:20,0:20:53.34:0,53,391	0/0:18,0:18:50.51:0,51,369	0/0:22,0:21:43.04:0,43,277	0/0:13,0:13:23.22:0,23,145	0/0:21,0:20:47.46:0,47,242	0/0:34,0:30:64.43:0,64,389	0/0:24,0:20:35.23:0,35,234	0/1:23,0:18:34.68:169,0,35	0/1:24,0:23:79.67:85,0,80	1/1:7,0:7:13.47:73,13,0	0/0:13,0:13:35.52:0,36,246	0/0:12,0:11:26.63:0,27,204	0/0:11,0:10:10.96:0,11,94	0/0:14,0:13:8.99:0,9,139	0/0:29,0:28:78.23:0,78,522	0/1:29,0:28:85.96:101,0,86	0/0:7,0:5:14.63:0,15,94
chr10	49963611	.	AC	A	1678.39	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.467;DP=640;FS=0.539;HRun=4;HaplotypeScore=64.3219;InbreedingCoeff=0.9703;MQ=80.78;MQ0=0;MQRankSum=-1.562;QD=29.45;ReadPosRankSum=2.941;VQSLOD=3.7942;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,36:38:99:1224,102,0	0/0:3,0:3:9:0,9,103	0/0:26,0:26:62.80:0,63,885	0/0:36,0:36:87.07:0,87,1096	0/0:36,0:36:93.15:0,93,1259	0/0:21,0:21:60.20:0,60,839	0/0:25,0:25:72.18:0,72,967	0/0:25,0:25:72.23:0,72,977	0/0:20,0:20:54.14:0,54,734	0/0:20,0:20:57.19:0,57,797	0/0:14,0:14:42.14:0,42,587	0/0:15,0:15:41.45:0,41,586	0/0:31,0:31:90.27:0,90,1235	0/0:14,0:14:42.13:0,42,570	0/0:20,0:20:60.18:0,60,808	1/1:1,18:19:48.15:576,48,0	0/0:24,0:24:69.23:0,69,965	0/0:14,0:14:36.12:0,36,504	0/0:31,0:31:90.25:0,90,1207	0/0:22,0:22:63.20:0,63,865	0/0:27,0:27:81.24:0,81,1097	0/0:30,0:30:87.29:0,87,1218	0/0:23,0:23:69.22:0,69,938	0/0:18,0:18:51.11:0,51,660	0/0:19,0:19:57.19:0,57,796	0/0:23,0:23:63.20:0,63,865	0/0:36,0:34:99:0,102,1405	0/0:10,0:10:30.10:0,30,420
chr10	49964319	.	A	ATG	3597.98	PASS	AB=0.993;AC=17;AF=0.304;AN=56;BaseQRankSum=9.569;DP=996;FS=8.855;HRun=0;HaplotypeScore=205.8385;InbreedingCoeff=-0.1468;MQ=54.28;MQ0=20;MQRankSum=-2.942;QD=6.96;ReadPosRankSum=1.067;VQSLOD=1.8794;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:61.29:0,61,881	1/1:6,9:15:21.07:327,21,0	0/0:51,0:22:17.76:0,18,155	0/0:44,0:18:2.13:0,2,55	0/1:33,0:34:84.38:89,0,84	0/0:31,0:33:71.88:0,72,708	0/0:35,0:35:32.69:0,33,491	0/1:45,0:43:45.08:45,0,365	0/0:34,0:36:74.80:0,75,811	0/1:54,0:56:99:332,0,225	0/1:22,0:23:25.35:25,0,94	0/0:26,0:28:45.28:0,45,541	0/0:45,0:45:99:0,111,1224	0/1:31,0:31:81.02:133,0,81	1/1:14,38:51:54.10:938,54,0	0/0:38,0:38:93.07:0,93,1038	0/0:18,0:20:1.19:0,1,43	0/1:13,0:15:55.37:55,0,63	0/1:21,1:22:60.66:122,0,61	0/1:36,2:38:99:377,0,131	0/1:64,0:63:99:516,0,288	0/0:31,1:32:6.55:0,7,640	0/0:32,0:32:75.66:0,76,841	0/0:32,0:34:80.98:0,81,856	0/1:31,0:32:38.19:87,0,38	0/1:36,0:40:99:297,0,248	0/1:34,0:34:99:195,0,250	0/1:15,0:15:22.76:60,0,23
chr10	49964336	.	T	TGA	3449.58	PASS	AB=0.742;AC=14;AF=0.250;AN=56;BaseQRankSum=13.158;DP=1015;FS=1.563;HRun=0;HaplotypeScore=215.5319;InbreedingCoeff=0.0861;MQ=54.14;MQ0=23;MQRankSum=-4.417;QD=9.15;ReadPosRankSum=3.314;VQSLOD=3.0997;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,101,1378	0/1:16,0:16:99:116,0,132	0/0:52,0:19:53.78:0,54,529	0/0:48,0:14:32.93:0,33,361	1/1:14,19:33:5.29:305,5,0	0/0:33,0:33:93.15:0,93,1215	0/0:36,0:36:93.61:0,94,1122	0/0:42,0:40:92.39:0,92,1192	0/0:37,0:37:89.99:0,90,1231	0/1:15,37:51:23.25:980,0,23	0/1:10,19:29:49.01:81,0,49	0/0:32,0:31:83.87:0,84,992	0/0:50,0:50:99:0,147,1967	0/1:7,26:34:6.88:290,0,7	0/1:56,0:55:99:331,0,244	0/0:38,0:37:99:0,102,1448	0/1:13,0:16:1.23:70,0,1	0/1:7,8:16:42.28:126,0,42	0/0:20,0:20:34.20:0,34,379	0/1:37,0:37:0.18:0,0,418	0/0:64,0:63:66.46:0,66,811	0/0:32,0:32:65.34:0,65,1106	0/0:32,0:32:90.23:0,90,1261	0/0:38,0:38:99:0,99,1337	0/1:6,28:34:16.66:167,0,17	0/1:17,22:39:31.12:800,0,31	0/0:35,0:35:43.08:0,43,582	1/1:2,13:15:3.66:182,4,0
chr10	49964342	.	T	TGA	8025.31	PASS	AB=0.833;AC=29;AF=0.518;AN=56;BaseQRankSum=7.920;DP=1018;FS=6.123;HRun=0;HaplotypeScore=209.0744;InbreedingCoeff=0.4771;MQ=54.70;MQ0=21;MQRankSum=-2.886;QD=12.46;ReadPosRankSum=-1.863;VQSLOD=3.6033;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:50,0:50:99:196,0,181	0/1:16,0:16:99:120,0,114	0/0:47,0:20:32.15:0,32,282	0/0:43,0:13:20.95:0,21,198	1/1:35,0:35:34.41:389,34,0	0/0:33,0:34:74.91:0,75,786	0/0:36,0:36:68.81:0,69,687	1/1:20,25:46:54.40:717,54,0	0/0:35,0:35:77.80:0,78,879	1/1:50,0:49:77.44:1080,77,0	1/1:25,0:25:9.38:119,9,0	0/0:28,0:28:71.82:0,72,735	0/0:47,0:47:99:0,119,1393	1/1:37,0:37:18.72:397,19,0	0/1:60,0:59:99:335,0,231	0/1:42,0:41:62.56:63,0,255	1/1:16,0:17:19.18:129,19,0	1/1:16,0:16:13.29:191,13,0	1/1:7,14:22:14.35:476,14,0	0/1:14,23:37:13.14:735,0,13	0/1:23,42:66:30.10:1220,0,30	0/0:33,0:33:38.11:0,38,636	0/0:32,0:32:88.72:0,89,979	0/0:36,0:38:92.94:0,93,962	1/1:33,0:33:16.25:297,16,0	1/1:38,0:38:56.36:879,56,0	0/1:13,23:36:67.85:493,0,68	1/1:16,0:16:8.57:189,9,0
chr10	49966106	.	T	TA	224.18	PASS	AB=0.686;AC=2;AF=0.036;AN=56;BaseQRankSum=5.241;DP=592;FS=11.001;HRun=0;HaplotypeScore=81.6835;InbreedingCoeff=0.3170;MQ=72.07;MQ0=0;MQRankSum=-1.992;QD=5.90;ReadPosRankSum=1.073;VQSLOD=2.4153;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:14,8:24:1.25:176,0,1	0/0:12,0:12:36.11:0,36,485	0/0:26,0:13:25.83:0,26,307	0/0:16,0:10:25.70:0,26,258	0/0:33,0:33:93.22:0,93,1240	0/0:26,0:26:78.20:0,78,1020	0/0:16,0:16:47.95:0,48,604	0/0:26,0:26:72.23:0,72,969	0/0:14,0:14:42.14:0,42,583	0/0:25,0:25:69.23:0,69,957	0/0:27,0:27:76.08:0,76,970	0/0:11,0:11:33.09:0,33,427	0/0:23,0:23:66:0,66,835	0/0:16,0:16:45.13:0,45,580	0/0:29,0:29:84.26:0,84,1137	0/1:7,6:14:15.62:137,0,16	0/0:22,0:23:69.18:0,69,895	0/0:17,0:17:45.15:0,45,608	0/0:25,0:25:72.64:0,73,961	0/0:21,0:21:54.09:0,54,736	0/0:5,0:5:8.12:0,8,124	0/0:22,0:22:63.17:0,63,858	0/0:27,0:27:69.22:0,69,944	0/0:13,0:13:39.12:0,39,528	0/0:26,0:26:54.04:0,54,704	0/0:34,0:34:99:0,101,1302	0/0:33,0:33:94.52:0,95,1258	0/0:7,0:7:18.05:0,18,229
chr10	49966107	.	TA	T	2023.76	PASS	AB=0.591;AC=16;AF=0.286;AN=56;BaseQRankSum=4.081;DP=592;FS=0.000;HRun=14;HaplotypeScore=72.9931;InbreedingCoeff=0.7603;MQ=73.30;MQ0=1;MQRankSum=1.232;QD=10.12;ReadPosRankSum=3.038;VQSLOD=3.2681;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:49.33:0,49,307	0/0:11,1:12:9.41:0,9,217	0/0:27,0:13:2.43:0,2,54	0/0:19,0:12:17.10:0,17,132	1/1:11,20:33:53.96:357,54,0	0/0:22,0:25:62.57:0,63,539	0/0:15,0:16:21.29:0,21,323	0/0:23,2:26:3.65:0,4,294	0/0:14,0:14:29.93:0,30,258	1/1:7,16:23:24.73:304,25,0	1/1:7,18:25:19.60:275,20,0	0/0:10,0:11:26.83:0,27,224	0/0:21,0:23:25.08:0,25,359	1/1:3,9:14:27.86:176,28,0	0/0:27,1:28:51.40:0,51,593	0/0:15,0:15:37.81:0,38,240	1/1:5,18:23:42.68:356,43,0	0/1:7,10:17:1.12:138,0,1	0/0:24,2:26:21.65:0,22,408	0/0:21,0:21:49.27:0,49,436	0/0:5,0:5:5.84:0,6,42	0/0:20,1:22:5.15:0,5,324	0/0:25,0:27:28.82:0,29,377	0/0:13,0:13:27.03:0,27,251	0/1:5,20:26:34.22:202,0,34	1/1:13,18:32:28.39:329,28,0	0/0:32,2:34:46.44:0,46,588	1/1:2,5:7:11.90:82,12,0
chr10	49966139	.	T	TGTAA	2989.22	PASS	AB=0.586;AC=3;AF=0.054;AN=56;BaseQRankSum=0.784;DP=537;FS=2.025;HRun=0;HaplotypeScore=101.8026;InbreedingCoeff=0.6538;MQ=75.45;MQ0=2;MQRankSum=-7.769;QD=64.98;ReadPosRankSum=-1.746;VQSLOD=5.3241;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,25:29:75.26:1958,75,0	0/0:9,0:9:27.09:0,27,519	0/0:19,0:16:32.05:0,32,662	0/0:12,0:8:9.03:0,9,175	0/0:30,0:30:84.29:0,84,1603	0/0:23,0:23:63.22:0,63,1217	0/0:17,0:17:48.16:0,48,928	0/0:25,0:25:69.23:0,69,1305	0/0:15,0:15:42.14:0,42,791	0/0:17,0:17:48.16:0,48,883	0/0:20,0:20:57.18:0,57,1064	0/0:10,0:10:30.10:0,30,576	0/0:17,0:17:48.16:0,48,910	0/0:16,0:16:45.14:0,45,823	0/0:26,0:25:75.26:0,75,1446	0/1:5,10:17:10:1138,0,10	0/0:27,0:27:81.25:0,81,1525	0/0:17,0:17:45.12:0,45,795	0/0:25,0:25:72.25:0,72,1364	0/0:28,0:28:78.25:0,78,1441	0/0:5,0:5:15.05:0,15,291	0/0:15,0:15:45.15:0,45,862	0/0:21,0:21:51.16:0,51,953	0/0:13,0:13:39.13:0,39,743	0/0:23,0:23:57.20:0,57,1099	0/0:20,0:20:54.19:0,54,1047	0/0:30,0:30:87.30:0,87,1673	0/0:10,0:10:27.09:0,27,523
chr10	49967049	.	CTT	C	514.31	PASS	AB=0.923;AC=5;AF=0.089;AN=56;BaseQRankSum=-0.148;DP=526;FS=6.846;HRun=12;HaplotypeScore=105.5542;InbreedingCoeff=0.7706;MQ=58.14;MQ0=15;MQRankSum=0.299;QD=8.57;ReadPosRankSum=1.453;VQSLOD=1.8138;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:51.94:0,52,347	1/1:3,8:11:21:210,21,0	0/0:18,0:6:10.70:0,11,56	0/0:21,0:7:8.18:0,8,167	0/0:19,0:17:18.47:0,18,56	0/0:12,0:12:24.01:0,24,278	0/0:14,0:13:22.57:0,23,270	0/0:25,0:25:47.48:0,47,580	0/0:9,0:10:20.42:0,20,257	0/1:22,0:22:1.69:2,0,35	0/0:19,0:19:33.99:0,34,134	0/0:16,0:16:30.06:0,30,423	0/0:13,0:12:29.50:0,30,317	0/0:10,0:9:15.26:0,15,57	1/1:5,20:23:40.37:424,40,0	0/0:19,0:19:50.48:0,50,357	0/0:14,0:14:26.23:0,26,104	0/0:8,0:9:10.86:0,11,30	0/0:17,0:17:46.89:0,47,577	0/0:25,0:29:73.54:0,74,822	0/0:17,0:18:44.53:0,45,553	0/0:18,0:18:54.04:0,54,662	0/0:20,0:22:48.98:0,49,617	0/0:14,0:14:23.20:0,23,393	0/0:30,0:31:43.08:0,43,132	0/0:25,0:26:11.26:0,11,44	0/0:29,0:29:78.04:0,78,940	0/0:11,0:13:16.77:0,17,45
chr10	49967050	.	T	TC	4267.38	PASS	AB=1.000;AC=22;AF=0.393;AN=56;BaseQRankSum=12.571;DP=523;FS=7.170;HRun=1;HaplotypeScore=87.3818;InbreedingCoeff=0.8231;MQ=58.23;MQ0=15;MQRankSum=-1.481;QD=19.22;ReadPosRankSum=4.132;VQSLOD=4.9869;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:22,1:23:8.64:82,9,0	0/0:11,0:11:26.89:0,27,208	0/0:19,0:6:17.39:0,17,126	0/0:20,0:7:13.71:0,14,140	1/1:1,18:16:30.49:335,30,0	0/0:11,0:11:33:0,33,347	0/0:14,0:13:29.51:0,30,316	0/0:27,0:26:41.69:0,42,640	0/0:9,0:9:1.25:0,1,238	1/1:2,21:21:56.73:573,57,0	1/1:2,19:21:55.39:557,55,0	0/0:18,0:18:45.06:0,45,527	0/0:13,0:12:26.90:0,27,302	1/1:0,10:9:23.99:263,24,0	0/0:25,0:23:51.23:0,51,384	0/1:18,0:18:9.97:15,0,10	1/1:4,13:14:15.27:334,15,0	1/1:1,8:9:18.04:200,18,0	0/0:17,0:17:45.97:0,46,556	0/0:29,0:29:71.69:0,72,824	0/0:18,0:18:47.72:0,48,571	0/0:19,0:19:51.09:0,51,619	0/0:22,0:22:55.79:0,56,680	0/1:14,0:14:6.70:7,0,395	1/1:1,29:30:66.19:772,66,0	1/1:1,24:25:71.96:776,72,0	0/0:29,0:29:78.15:0,78,918	1/1:2,11:13:30.09:353,30,0
chr10	49967864	.	GT	G	924.02	PASS	AB=0.600;AC=9;AF=0.225;AN=40;BaseQRankSum=1.784;DP=620;FS=4.034;HRun=2;HaplotypeScore=23.4950;InbreedingCoeff=0.6646;MQ=17.17;MQ0=214;MQRankSum=-1.202;QD=11.27;ReadPosRankSum=-3.691;VQSLOD=0.4674;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:4:6.02:0,6,90	0/0:9,0:6:15.03:0,15,202	./.	./.	1/1:1,21:21:21.07:271,21,0	0/0:31,0:7:15.05:0,15,219	0/0:25,0:2:6.02:0,6,89	./.	0/0:24,0:7:9.03:0,9,134	0/1:4,8:9:23.79:212,0,24	1/1:1,7:5:9.03:116,9,0	0/0:30,0:11:15.05:0,15,224	0/0:27,0:7:21.07:0,21,314	./.	0/0:36,0:9:9.03:0,9,134	0/0:31,0:9:18.06:0,18,269	./.	./.	0/0:15,0:1:3.01:0,3,45	0/0:30,0:19:39.13:0,39,583	0/0:40,0:5:3.01:0,3,45	0/0:24,0:12:21.07:0,21,314	0/0:22,0:12:27.09:0,27,403	./.	1/1:2,21:19:18.06:233,18,0	1/1:4,13:9:18.06:233,18,0	0/0:35,0:20:29.78:0,30,439	./.
chr10	49968072	.	C	CCATTCAT	3610.82	PASS	AB=0.675;AC=15;AF=0.268;AN=56;BaseQRankSum=13.966;DP=671;FS=1.234;HRun=0;HaplotypeScore=150.1537;InbreedingCoeff=-0.1950;MQ=51.54;MQ0=6;MQRankSum=-5.334;QD=10.98;ReadPosRankSum=1.861;VQSLOD=2.9216;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:50.57:0,51,1351	0/0:9,0:9:6.02:0,6,95	0/0:15,0:10:29.31:0,29,506	0/0:17,0:15:45.12:0,45,701	0/1:20,1:28:99:169,0,587	0/0:34,0:34:93.32:0,93,2162	0/0:16,0:16:45.11:0,45,865	0/0:33,0:31:61.75:0,62,1067	0/0:15,0:15:42.14:0,42,989	0/1:7,1:20:99:797,0,230	0/1:11,0:21:99:177,0,294	0/0:31,0:31:84.29:0,84,1872	0/0:27,0:27:72.16:0,72,1698	0/1:7,0:13:99:207,0,124	1/1:28,0:28:16.54:112,17,0	0/0:22,0:23:63.22:0,63,1374	0/1:18,0:34:75.93:76,0,506	0/1:3,0:16:65.35:96,0,65	0/1:7,0:14:80.36:80,0,223	0/1:14,0:35:99:197,0,447	0/1:14,0:21:99:173,0,386	0/0:40,0:40:84.29:0,84,1970	0/0:32,0:32:78.27:0,78,1874	0/0:26,0:26:68.45:0,68,1650	0/1:6,1:19:99:205,0,141	0/1:10,0:28:99:1069,0,281	0/1:15,0:39:99:159,0,535	0/1:7,0:6:93.42:93,0,127
chr10	49968077	.	T	TCATA	4449.49	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=11.146;DP=672;FS=0.000;HRun=0;HaplotypeScore=112.6772;InbreedingCoeff=-0.0878;MQ=52.42;MQ0=6;MQRankSum=-3.875;QD=11.90;ReadPosRankSum=6.746;VQSLOD=3.8362;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:54.09:0,54,919	1/1:1,7:8:3.01:81,3,0	0/0:15,0:10:20.19:0,20,273	0/0:17,0:15:39.02:0,39,455	0/1:27,0:25:46.52:47,0,202	0/0:33,0:33:90.05:0,90,1377	0/0:18,0:18:50.84:0,51,571	0/1:34,0:32:7.21:7,0,477	0/0:15,0:15:36.01:0,36,576	0/1:21,0:21:99:245,0,117	0/1:22,0:22:58.62:59,0,145	0/0:30,0:30:83.79:0,84,1164	0/0:25,0:25:71.99:0,72,1114	0/1:14,0:13:31.95:81,0,32	1/1:0,31:31:39.13:1039,39,0	0/0:22,0:22:62.92:0,63,836	0/1:32,0:32:99:315,0,217	1/1:16,0:16:5.09:345,5,0	0/1:16,0:14:99:327,0,102	0/1:35,0:35:99:832,0,228	0/1:22,0:22:25.18:25,0,202	0/0:41,0:41:86.84:0,87,1251	0/0:31,0:31:80.99:0,81,1245	0/0:27,0:27:72.05:0,72,1110	0/1:21,0:19:47.94:79,0,48	0/1:28,0:28:99:388,0,108	0/1:39,0:39:99:566,0,199	0/1:8,0:7:14.19:14,0,32
chr10	49968976	.	T	TC	2390.10	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-1.013;DP=711;FS=0.000;HRun=6;HaplotypeScore=70.1741;InbreedingCoeff=0.9988;MQ=94.04;MQ0=0;MQRankSum=-4.481;QD=31.87;ReadPosRankSum=2.364;VQSLOD=4.0531;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,44:47:99:1606,129,0	0/0:9,0:9:27.06:0,27,275	0/0:33,0:33:78.09:0,78,767	0/0:35,0:36:84.11:0,84,836	0/0:28,0:28:78.17:0,78,796	0/0:15,0:15:42.09:0,42,428	0/0:28,0:28:75.15:0,75,757	0/0:28,0:28:69.15:0,69,704	0/0:20,0:20:51.11:0,51,520	0/0:33,0:33:93.18:0,93,933	0/0:18,0:18:48.10:0,48,489	0/0:27,0:27:78.14:0,78,781	0/0:22,0:22:63.13:0,63,636	0/0:27,0:27:75.17:0,75,763	0/0:30,0:30:81.18:0,81,826	1/1:4,24:28:72.23:906,72,0	0/0:36,0:36:99:0,102,1041	0/0:13,0:13:36.05:0,36,357	0/0:22,0:22:57.13:0,57,582	0/0:23,0:23:69.15:0,69,703	0/0:45,0:45:99:0,108,1080	0/0:17,0:17:39.08:0,39,397	0/0:27,0:27:72.16:0,72,733	0/0:12,0:12:27.06:0,27,275	0/0:23,0:23:66.15:0,66,673	0/0:26,0:26:66.13:0,66,666	0/0:26,0:26:69.15:0,69,704	0/0:12,0:12:36.08:0,36,367
chr10	49969777	.	AG	A	2034.84	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=11.944;DP=576;FS=6.730;HRun=3;HaplotypeScore=59.9361;InbreedingCoeff=0.9686;MQ=93.72;MQ0=0;MQRankSum=-2.770;QD=30.83;ReadPosRankSum=3.707;VQSLOD=3.5298;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,50:50:99:1579,129,0	0/0:3,0:3:9.02:0,9,111	0/0:29,0:29:74.94:0,75,1006	0/0:28,0:28:81.24:0,81,1124	0/0:23,0:23:63.21:0,63,900	0/0:19,0:19:51.14:0,51,713	0/0:27,0:27:78.25:0,78,1104	0/0:36,0:36:96.26:0,96,1311	0/0:16,0:16:45.15:0,45,644	0/0:18,0:18:54.18:0,54,776	0/0:10,0:10:27.09:0,27,388	0/0:30,0:30:87.27:0,87,1209	0/0:11,0:11:30.10:0,30,432	0/0:22,0:22:66.22:0,66,949	0/0:26,0:26:72.23:0,72,1017	1/1:0,16:16:48.12:578,48,0	0/0:27,0:27:81.27:0,81,1165	0/0:17,0:17:51.17:0,51,734	0/0:19,0:19:57.11:0,57,774	0/0:18,0:18:54.17:0,54,748	0/0:35,0:35:90.29:0,90,1278	0/0:13,0:13:33.11:0,33,472	0/0:10,0:10:30.09:0,30,414	0/0:9,0:9:27.09:0,27,389	0/0:18,0:18:54.18:0,54,777	0/0:21,0:21:54.17:0,54,760	0/0:16,0:16:39.13:0,39,561	0/0:9,0:9:27.09:0,27,389
chr10	49971752	.	G	GAGAC	756.03	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=8.399;DP=559;FS=0.000;HRun=0;HaplotypeScore=128.7257;InbreedingCoeff=0.2995;MQ=52.19;MQ0=5;MQRankSum=-2.511;QD=3.74;ReadPosRankSum=3.298;VQSLOD=2.3418;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:13:6.02:71,6,0	1/1:2,8:10:5.95:113,6,0	0/0:15,0:12:29.62:0,30,417	0/0:25,0:21:57.04:0,57,844	0/1:22,0:22:53.90:54,0,297	0/1:14,0:14:4.90:5,0,151	0/0:22,0:22:30.09:0,30,465	0/0:43,0:41:81.96:0,82,1269	0/1:23,0:23:3.56:4,0,409	0/0:19,0:17:31.93:0,32,588	0/0:22,0:21:24.86:0,25,416	0/0:17,0:17:29.99:0,30,382	0/1:17,0:17:9.07:9,0,230	0/0:21,0:20:30.08:0,30,449	1/1:3,14:18:9.03:229,9,0	1/1:13,0:13:4.97:44,5,0	0/1:18,0:18:49.81:50,0,290	0/0:13,0:14:25.48:0,25,401	0/0:24,0:23:33.07:0,33,727	0/0:19,0:18:8.14:0,8,399	0/0:18,0:23:30.67:0,31,443	0/0:12,0:12:21.72:0,22,380	0/0:16,0:15:17.94:0,18,246	0/0:13,0:14:20.74:0,21,308	0/0:18,0:18:54.14:0,54,792	0/1:31,0:31:99:127,0,596	0/0:27,0:27:59.80:0,60,754	0/1:22,0:22:99:212,0,230
chr10	49971763	.	G	GCAGA	389.19	PASS	AB=1.000;AC=6;AF=0.107;AN=56;BaseQRankSum=4.196;DP=574;FS=3.969;HRun=0;HaplotypeScore=133.0723;InbreedingCoeff=0.5700;MQ=62.99;MQ0=3;MQRankSum=-4.313;QD=5.99;ReadPosRankSum=-0.881;VQSLOD=2.3401;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:6,13:20:6.02:145,6,0	0/1:10,0:10:15.13:15,0,80	0/0:21,0:18:35.85:0,36,510	0/0:30,0:27:59.75:0,60,915	0/0:22,0:22:50.40:0,50,573	0/0:12,0:12:24.04:0,24,321	0/0:21,0:21:45.08:0,45,731	0/0:41,0:42:87.23:0,87,1364	0/0:22,0:22:44.96:0,45,627	0/0:19,0:17:45.15:0,45,757	0/0:19,0:19:38.90:0,39,575	0/0:19,0:19:45.03:0,45,657	0/0:19,0:19:38.97:0,39,549	0/0:23,0:22:47:0,47,657	0/1:17,0:17:74.37:89,0,74	1/1:1,16:18:17.85:267,18,0	0/0:15,0:15:38.94:0,39,539	0/0:13,0:13:30.57:0,31,519	0/0:25,0:23:50.18:0,50,847	0/0:17,0:16:14.45:0,14,519	0/0:25,0:25:52.31:0,52,763	0/0:11,0:11:27.05:0,27,436	0/0:15,0:14:20.62:0,21,326	0/0:15,0:15:32.47:0,32,431	0/0:20,0:20:51.12:0,51,825	0/0:29,0:29:54.15:0,54,836	0/0:27,0:26:69.01:0,69,1058	0/0:24,0:24:53.78:0,54,568
chr10	49972658	.	AC	A	4843.21	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=5.872;DP=680;FS=4.320;HRun=2;HaplotypeScore=84.8926;InbreedingCoeff=0.9998;MQ=80.94;MQ0=0;MQRankSum=0.010;QD=35.61;ReadPosRankSum=-0.252;VQSLOD=5.0548;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:96.33:0,96,1439	0/0:10,0:10:30.10:0,30,450	0/0:18,0:19:52.06:0,52,745	0/0:17,0:17:48.15:0,48,679	0/0:29,0:29:87.28:0,87,1283	0/0:20,0:20:57.19:0,57,854	0/0:32,0:32:96.31:0,96,1420	1/1:1,22:23:60.18:764,60,0	0/0:21,0:21:63.21:0,63,941	0/0:30,0:30:90.30:0,90,1320	0/0:18,0:18:54.18:0,54,805	0/0:27,0:27:75.24:0,75,1101	0/0:27,0:27:78.25:0,78,1150	0/0:25,0:25:72.24:0,72,1079	0/0:27,0:27:81.27:0,81,1213	0/0:38,0:38:99:0,105,1552	0/0:23,0:23:66.22:0,66,986	0/0:20,0:20:57.19:0,57,854	1/1:1,15:16:45.15:584,45,0	1/1:2,24:26:62.89:885,63,0	1/1:2,37:39:99:1479,114,0	0/0:27,0:27:78.26:0,78,1169	0/0:28,0:28:77.97:0,78,1133	0/0:19,0:19:57.19:0,57,854	0/0:18,0:18:54.18:0,54,809	0/0:24,0:24:69.23:0,69,1034	1/1:1,31:32:87.28:1130,87,0	0/0:12,0:12:36.12:0,36,539
chr10	49972696	.	A	AT	8185.64	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-15.906;DP=715;FS=5.223;HRun=1;HaplotypeScore=77.7606;InbreedingCoeff=0.9999;MQ=91.31;MQ0=0;MQRankSum=-7.487;QD=41.55;ReadPosRankSum=2.699;VQSLOD=5.4421;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,129,1624	0/0:11,0:11:30.10:0,30,383	0/0:32,0:32:92.45:0,92,1032	0/0:27,0:28:55.68:0,56,735	1/1:1,29:30:84.24:1234,84,0	0/0:23,0:23:69.19:0,69,865	0/0:32,0:32:96.28:0,96,1216	0/0:28,0:28:78.24:0,78,988	0/0:25,0:25:75.24:0,75,974	1/1:1,27:28:81.27:1211,81,0	1/1:0,17:17:45.11:649,45,0	0/0:22,0:22:66.20:0,66,842	0/0:29,0:29:81.24:0,81,1034	1/1:1,25:26:72.24:1079,72,0	0/0:29,0:29:87.27:0,87,1116	0/0:35,0:35:93.27:0,93,1179	1/1:0,23:23:66.22:989,66,0	1/1:0,23:23:66.01:957,66,0	0/0:22,0:22:63.18:0,63,802	0/0:26,0:26:78.18:0,78,976	0/0:36,0:36:99:0,108,1383	0/0:26,0:26:78.24:0,78,998	0/0:25,0:25:72.21:0,72,918	0/0:17,0:17:48.16:0,48,622	1/1:2,14:16:42.14:629,42,0	1/1:1,21:22:60.20:899,60,0	0/0:29,0:29:81.26:0,81,1051	1/1:0,12:12:36.12:539,36,0
chr10	49973377	.	TGA	T	5802.19	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=10.896;DP=603;FS=0.000;HRun=0;HaplotypeScore=75.0730;InbreedingCoeff=0.9721;MQ=86.48;MQ0=0;MQRankSum=0.553;QD=33.54;ReadPosRankSum=0.582;VQSLOD=6.3486;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:75.26:0,75,1375	0/0:12,0:12:33.11:0,33,598	0/0:25,0:25:74.69:0,75,1222	0/0:15,0:15:35.93:0,36,557	1/1:11,11:22:48.15:666,48,0	0/0:22,0:22:57.20:0,57,1039	0/0:26,0:26:78.27:0,78,1424	0/0:35,0:35:99:0,99,1728	0/0:19,0:19:57.20:0,57,1024	1/1:1,10:11:30.10:430,30,0	1/1:5,12:17:30.10:428,30,0	0/0:24,0:24:69.24:0,69,1265	0/0:16,0:16:45.15:0,45,823	1/1:1,20:21:57.19:810,57,0	0/0:27,0:27:81.28:0,81,1485	0/0:23,0:23:63.22:0,63,1143	1/1:1,24:25:66.22:943,66,0	1/1:0,28:28:69.23:988,69,0	0/0:24,0:24:66.22:0,66,1175	0/0:19,0:19:54.17:0,54,958	0/0:32,0:32:90.29:0,90,1614	0/0:12,0:12:33.11:0,33,604	0/0:16,0:16:33.10:0,33,574	0/0:29,0:29:81.28:0,81,1460	1/1:11,18:29:57.14:787,57,0	1/1:4,15:19:51.15:707,51,0	0/0:26,0:26:75.26:0,75,1374	1/1:0,1:1:3.01:43,3,0
chr10	49974830	.	TCACACACACACA	T	5034.38	PASS	AB=0.864;AC=15;AF=0.278;AN=54;BaseQRankSum=5.798;DP=593;FS=7.169;HRun=0;HaplotypeScore=205.3579;InbreedingCoeff=0.8886;MQ=61.28;MQ0=7;MQRankSum=-9.783;QD=34.96;ReadPosRankSum=3.494;VQSLOD=3.5387;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:36:54.55:0,55,2719	0/0:4,0:9:15.05:0,15,345	0/0:39,0:25:20.96:0,21,410	0/0:24,0:14:15.05:0,15,662	1/1:8,11:21:27.09:907,27,0	0/0:15,0:15:27.09:0,27,1547	0/0:19,0:22:39.13:0,39,2035	0/0:21,0:26:27.09:0,27,455	0/0:23,0:23:36.11:0,36,1621	1/1:12,5:18:15.05:501,15,0	1/1:3,6:9:12.04:417,12,0	0/0:20,0:21:45.15:0,45,2282	0/0:20,0:24:45.15:0,45,2389	1/1:8,9:18:24.08:814,24,0	0/0:13,0:26:45.61:0,46,1603	0/0:11,0:18:27.09:0,27,1302	1/1:13,7:19:18.06:626,18,0	0/1:16,3:19:51.32:301,0,51	0/0:16,0:23:35.48:0,35,508	0/0:12,0:28:29.42:0,29,659	0/0:14,0:18:33.11:0,33,700	0/0:18,0:21:60.19:0,60,2659	0/0:16,0:18:36.98:0,37,2023	0/0:20,0:23:53.72:0,54,2801	1/1:10,6:16:18.06:626,18,0	1/1:14,7:23:27.09:844,27,0	0/0:15,0:28:51.16:0,51,824	./.
chr10	49975694	.	CCT	C	3059.52	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=10.676;DP=730;FS=1.548;HRun=0;HaplotypeScore=82.5021;InbreedingCoeff=0.9729;MQ=69.71;MQ0=0;MQRankSum=-0.835;QD=39.73;ReadPosRankSum=1.857;VQSLOD=5.7924;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,44:45:99:2007,123,0	0/0:15,0:15:45.15:0,45,896	0/0:9,0:9:13.93:0,14,396	0/0:15,0:15:12.25:0,12,516	0/0:30,0:30:90.31:0,90,1802	0/0:22,0:22:63.22:0,63,1280	0/0:28,0:28:84.27:0,84,1631	0/0:30,0:30:90.31:0,90,1826	0/0:29,0:29:87.29:0,87,1732	0/0:36,0:36:99:0,108,2194	0/0:24,0:24:72.25:0,72,1443	0/0:28,0:28:84.29:0,84,1682	0/0:36,0:36:99:0,108,2188	0/0:24,0:24:72.21:0,72,1405	0/0:38,0:38:99:0,114,2307	1/1:0,32:32:72.05:1175,72,0	0/0:34,0:34:90.31:0,90,1799	0/0:20,0:19:60.16:0,60,1164	0/0:22,0:22:66.23:0,66,1303	0/0:29,0:29:84.29:0,84,1707	0/0:23,0:23:69.24:0,69,1399	0/0:29,0:29:84.28:0,84,1631	0/0:20,0:20:60.21:0,60,1193	0/0:19,0:19:57.20:0,57,1158	0/0:23,0:23:69.24:0,69,1398	0/0:37,0:37:99:0,108,2155	0/0:26,0:26:78.27:0,78,1585	0/0:7,0:7:21.07:0,21,409
chr10	49978448	.	T	TCA	2227.31	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=10.379;DP=674;FS=7.809;HRun=0;HaplotypeScore=191.0409;InbreedingCoeff=0.6897;MQ=47.92;MQ0=17;MQRankSum=-0.872;QD=8.84;ReadPosRankSum=-1.079;VQSLOD=2.2883;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:28:2.53:46,3,0	0/0:10,0:10:24.07:0,24,322	0/0:26,0:9:23.30:0,23,199	0/0:21,0:5:14.92:0,15,136	1/1:11,27:41:12.27:358,12,0	0/0:25,0:24:48.53:0,49,652	0/0:19,0:17:36.08:0,36,466	0/0:32,0:29:56.25:0,56,603	0/0:27,0:27:65.29:0,65,770	1/1:9,19:27:18.96:759,19,0	1/1:6,12:18:5.68:92,6,0	0/0:30,0:30:80.37:0,80,1049	0/0:26,0:26:69:0,69,894	1/1:11,12:24:2.98:36,3,0	0/0:45,0:44:80.49:0,80,1036	0/1:16,0:16:4.85:61,0,5	1/1:14,1:15:21.90:302,22,0	1/1:12,1:13:13.34:180,13,0	0/0:20,0:19:42.28:0,42,439	0/1:19,0:17:36.73:37,0,108	0/0:38,0:36:39.63:0,40,316	0/0:30,0:30:57.11:0,57,734	0/0:20,0:19:48.14:0,48,688	0/0:29,0:29:56.57:0,57,864	1/1:9,9:15:8.69:116,9,0	1/1:21,1:21:4.37:344,4,0	0/0:23,0:23:20.92:0,21,230	0/1:7,0:7:5.62:93,0,6
chr10	49978450	.	T	TCA	3990.70	PASS	AB=0.785;AC=28;AF=0.500;AN=56;BaseQRankSum=8.772;DP=684;FS=1.856;HRun=0;HaplotypeScore=184.7189;InbreedingCoeff=0.6335;MQ=48.06;MQ0=23;MQRankSum=-1.200;QD=10.99;ReadPosRankSum=-1.591;VQSLOD=3.3920;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:28:2.61:45,3,0	0/0:10,0:10:21.37:0,21,176	0/0:29,0:9:16.99:0,17,190	0/0:26,0:5:14.74:0,15,123	1/1:40,0:40:29.85:426,30,0	0/0:25,0:24:51.54:0,52,677	0/0:18,0:16:39.02:0,39,457	1/1:16,14:28:27.01:341,27,0	0/0:26,0:26:63.05:0,63,761	1/1:28,0:27:38.82:804,39,0	1/1:18,0:17:5.67:91,6,0	0/0:31,0:31:83.57:0,84,1068	0/0:28,0:28:68.89:0,69,892	1/1:24,0:24:2.98:36,3,0	0/0:47,0:46:77.39:0,77,570	1/1:16,0:16:12.17:76,12,0	1/1:15,0:15:23.39:308,23,0	1/1:15,0:15:13.12:187,13,0	0/1:20,1:19:17.98:219,0,18	0/1:5,12:16:43.27:260,0,43	0/1:41,0:39:7.88:624,0,8	0/0:30,0:30:57.08:0,57,726	0/0:23,0:22:52.68:0,53,699	0/0:28,0:28:59.56:0,60,881	1/1:17,0:14:2.69:46,3,0	1/1:22,0:21:25.24:405,25,0	0/1:7,13:20:5.64:6,0,41	1/1:8,0:8:11.75:115,12,0
chr10	49978510	.	TCTCTCACACACA	T	1898.28	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.188;DP=842;FS=17.237;HRun=0;HaplotypeScore=291.7359;InbreedingCoeff=0.9969;MQ=60.16;MQ0=4;MQRankSum=-7.091;QD=46.30;ReadPosRankSum=-4.604;VQSLOD=1.6551;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:8,15:23:25.95:714,26,0	0/0:12,0:12:27.09:0,27,1486	0/0:51,0:16:32.91:0,33,922	0/0:41,0:23:25.88:0,26,1628	0/0:30,0:30:57.20:0,57,3085	0/0:20,0:20:54.19:0,54,2761	0/0:24,0:24:63.22:0,63,3361	0/0:37,0:35:75.24:0,75,2963	0/0:35,0:35:90.31:0,90,4767	0/0:31,0:31:87.30:0,87,4521	0/0:23,0:23:50.87:0,51,2848	0/0:32,0:32:75.26:0,75,3892	0/0:32,0:32:87.30:0,87,4613	0/0:27,0:27:38.87:0,39,2144	0/0:47,0:47:99:0,120,6501	1/1:2,16:18:48.12:1305,48,0	0/0:20,0:20:46.40:0,46,2529	0/0:31,0:31:66.46:0,66,3984	0/0:25,0:21:45.15:0,45,2063	0/0:32,0:32:74.70:0,75,4128	0/0:76,0:74:99:0,126,9558	0/0:19,0:19:54.15:0,54,2507	0/0:31,0:31:84.29:0,84,4636	0/0:40,0:40:96.32:0,96,5254	0/0:21,0:21:57.18:0,57,3298	0/0:30,0:30:84.29:0,84,4457	0/0:23,0:23:45.15:0,45,2622	0/0:11,0:11:24.08:0,24,1438
chr10	49978643	.	T	TCACA	2450.18	PASS	AB=0.916;AC=32;AF=0.615;AN=52;BaseQRankSum=2.048;DP=682;FS=25.921;HRun=0;HaplotypeScore=137.3636;InbreedingCoeff=0.6150;MQ=55.04;MQ0=35;MQRankSum=-3.003;QD=5.42;ReadPosRankSum=-2.066;VQSLOD=0.2058;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:12:3.01:45,3,0	1/1:6,10:19:20.68:325,21,0	./.	0/1:58,0:27:0:0,0,0	0/1:15,0:15:0.27:0,0,0	0/0:18,0:18:24.06:0,24,344	0/0:20,0:22:33.09:0,33,481	1/1:34,1:35:27.88:365,28,0	0/0:29,0:30:44.38:0,44,636	1/1:19,0:18:9.49:119,9,0	1/1:22,0:22:3.01:49,3,0	0/0:29,0:29:29.83:0,30,435	0/0:16,0:16:30.08:0,30,446	1/1:18,0:14:7.67:68,8,0	1/1:11,15:35:20.54:384,21,0	./.	1/1:20,0:17:6.02:78,6,0	1/1:12,0:12:7.57:71,8,0	1/1:11,0:16:21.07:345,21,0	1/1:12,1:20:6.02:122,6,0	0/1:33,24:62:11.42:132,0,11	0/0:15,0:15:18.05:0,18,253	0/0:20,0:20:29.29:0,29,394	0/1:33,0:35:15.66:16,0,565	0/0:21,0:19:0.47:0,0,1	1/1:25,0:23:21.47:205,21,0	1/1:8,0:14:15.05:258,15,0	1/1:7,0:7:3.01:47,3,0
chr10	49979278	.	C	CTTAT	8424.70	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-6.596;DP=417;FS=16.974;HRun=0;HaplotypeScore=54.1264;InbreedingCoeff=0.9263;MQ=58.84;MQ0=2;MQRankSum=0.938;QD=27.99;ReadPosRankSum=2.802;VQSLOD=3.1473;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,15:24:12.93:241,13,0	1/1:4,0:4:12:163,12,0	0/0:13,0:11:20.16:0,20,280	0/0:8,0:5:12.02:0,12,132	1/1:3,8:12:24.01:466,24,0	0/0:19,0:19:48.13:0,48,746	0/0:8,0:8:15.03:0,15,229	1/1:38,0:36:57.16:780,57,0	0/0:14,0:14:36.12:0,36,582	1/1:4,13:17:39.12:771,39,0	1/1:1,9:10:20.90:292,21,0	0/0:6,0:6:12.04:0,12,189	0/0:22,0:22:57.07:0,57,781	1/1:0,6:7:12.04:301,12,0	1/1:2,17:19:17.93:399,18,0	1/1:5,15:20:24.08:526,24,0	1/1:6,13:23:15.52:377,16,0	1/1:1,15:17:24.08:601,24,0	1/1:6,19:24:57.15:1027,57,0	1/1:4,12:16:35.98:569,36,0	1/1:2,5:8:3.01:75,3,0	0/0:8,0:8:18.01:0,18,216	0/0:11,0:11:24.05:0,24,349	0/0:7,0:7:21.05:0,21,308	1/1:6,13:19:27.09:677,27,0	1/1:2,10:12:30.06:507,30,0	1/1:6,11:19:20.94:502,21,0	1/1:4,7:11:6.02:150,6,0
chr10	49982454	.	ATGTGTGTGTG	A	2407.02	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=4.731;DP=528;FS=4.844;HRun=0;HaplotypeScore=159.1276;InbreedingCoeff=0.7464;MQ=59.06;MQ0=25;MQRankSum=-6.206;QD=26.45;ReadPosRankSum=2.267;VQSLOD=3.1135;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:24:6.48:0,6,176	0/0:7,0:7:18.05:0,18,695	0/0:32,0:14:3.01:0,3,39	0/0:23,0:9:3.01:0,3,46	0/0:16,0:15:12.04:0,12,526	0/0:17,0:19:30.10:0,30,1300	0/0:16,0:15:18.06:0,18,752	1/1:22,0:22:2.78:77,3,0	0/0:14,0:14:24.08:0,24,1131	0/0:22,0:22:50.96:0,51,1884	0/0:20,0:20:17.96:0,18,689	0/0:14,0:15:33.11:0,33,1428	0/0:15,0:15:27.09:0,27,1250	0/0:14,0:16:9.50:0,10,395	0/0:16,0:18:36.12:0,36,1655	0/0:13,0:24:21.54:0,22,835	0/0:17,0:17:15.94:0,16,367	0/0:10,0:9:10.28:0,10,275	1/1:13,5:19:21.07:588,21,0	1/1:11,15:31:36.12:922,36,0	0/0:14,0:12:5.96:0,6,44	0/0:7,0:12:24.08:0,24,1011	0/0:13,0:15:24.08:0,24,945	0/0:12,0:12:20.66:0,21,679	0/0:25,0:27:7.30:0,7,281	0/0:29,0:28:57.19:0,57,2056	1/1:4,13:18:33.11:968,33,0	0/0:15,0:15:12.98:0,13,412
chr10	49984520	.	A	AGTGT	5237.58	PASS	AB=0.923;AC=42;AF=0.808;AN=52;BaseQRankSum=-0.290;DP=788;FS=1.055;HRun=0;HaplotypeScore=185.1110;InbreedingCoeff=-0.1320;MQ=60.76;MQ0=13;MQRankSum=-1.653;QD=7.50;ReadPosRankSum=-1.583;VQSLOD=3.9296;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:31,0:34:19.76:169,0,20	1/1:10,0:8:12.04:185,12,0	./.	./.	1/1:34,0:32:11.68:69,12,0	1/1:19,5:27:14.78:249,15,0	0/1:23,5:30:19.89:413,0,20	1/1:29,0:29:12.43:126,12,0	0/1:14,10:26:15.16:508,0,15	1/1:32,0:28:14.55:143,15,0	0/1:15,0:14:4.56:5,0,41	1/1:24,1:27:14.52:197,15,0	0/1:16,2:17:25.93:268,0,26	0/1:20,0:19:0:0,0,0	1/1:20,0:21:14.96:216,15,0	1/1:20,5:24:21.07:491,21,0	0/1:33,0:31:55.87:56,0,162	0/1:23,0:24:36.58:42,0,37	1/1:17,0:17:18.04:238,18,0	1/1:21,0:20:18.22:288,18,0	1/1:54,0:51:11.98:147,12,0	1/1:13,10:26:14.79:295,15,0	1/1:17,8:28:8.96:150,9,0	1/1:22,7:34:11.51:166,12,0	0/1:26,0:27:27.85:149,0,28	0/1:41,0:41:34.56:123,0,35	1/1:28,0:29:30.06:476,30,0	1/1:13,0:12:6.40:69,6,0
chr10	49984551	.	G	GTA	5140.28	PASS	AB=0.934;AC=31;AF=0.554;AN=56;BaseQRankSum=4.744;DP=822;FS=8.291;HRun=0;HaplotypeScore=169.9545;InbreedingCoeff=-0.0168;MQ=45.10;MQ0=52;MQRankSum=-1.487;QD=8.33;ReadPosRankSum=8.902;VQSLOD=3.0007;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:35,0:34:43.11:43,0,235	0/1:10,0:8:3.59:4,0,36	0/1:62,0:5:0.67:1,0,32	0/0:92,0:7:20.90:0,21,179	1/1:16,28:41:38.17:659,38,0	0/1:26,0:26:18.01:18,0,210	0/0:30,0:29:11.77:0,12,294	0/1:37,0:33:65.23:325,0,65	0/1:26,0:26:13.24:13,0,198	1/1:19,8:22:28.73:689,29,0	1/1:5,9:13:5.89:218,6,0	0/1:25,0:24:6:6,0,276	0/1:22,0:20:18.28:18,0,149	1/1:12,2:13:12.01:165,12,0	0/0:22,0:22:12.63:0,13,159	0/0:23,0:21:10.70:0,11,102	0/1:18,5:21:37.16:467,0,37	0/1:12,12:23:30.13:219,0,30	1/1:16,0:16:16.43:288,16,0	1/1:15,1:21:14.23:241,14,0	0/1:48,0:45:85.54:201,0,86	0/1:33,0:31:8.40:8,0,146	0/1:25,0:24:2.58:3,0,158	0/0:38,0:37:4.57:0,5,287	1/1:8,13:22:15.36:465,15,0	0/1:26,5:30:27.65:550,0,28	0/1:9,0:16:8.17:267,0,8	1/1:2,8:11:14.92:273,15,0
chr10	49984590	.	TTG	T	2861.24	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=6.421;DP=776;FS=11.726;HRun=0;HaplotypeScore=186.2444;InbreedingCoeff=0.9192;MQ=45.05;MQ0=41;MQRankSum=-2.027;QD=15.22;ReadPosRankSum=0.226;VQSLOD=2.4046;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:30:30.53:0,31,497	0/0:7,0:7:5.61:0,6,61	0/0:66,0:8:18.06:0,18,236	0/0:76,0:10:18.52:0,19,254	1/1:16,13:29:13.11:137,13,0	0/0:19,0:19:10.58:0,11,379	0/0:27,0:27:51:0,51,775	0/0:31,0:30:62.11:0,62,785	0/0:24,0:24:46.96:0,47,661	1/1:16,10:25:51.11:589,51,0	1/1:4,3:7:5.91:72,6,0	0/0:28,0:28:64.57:0,65,942	0/0:20,0:20:52.63:0,53,635	1/1:5,15:20:27.13:324,27,0	0/0:21,0:21:24.58:0,25,428	0/0:15,0:15:8.39:0,8,98	1/1:9,11:21:42.11:486,42,0	1/1:11,13:23:39.68:515,40,0	0/0:28,0:24:44.48:0,44,467	0/0:26,0:25:26.22:0,26,246	0/0:58,0:56:62.53:0,63,591	0/0:23,0:23:31.76:0,32,459	0/0:20,0:20:33.45:0,33,479	0/0:40,1:41:77.55:0,78,1121	1/1:15,10:25:11.17:205,11,0	1/1:21,7:26:59.65:666,60,0	0/0:21,0:21:29.64:0,30,240	1/1:4,2:6:6.02:71,6,0
chr10	49984600	.	GTGTA	G	4205.70	PASS	AB=0.988;AC=26;AF=0.464;AN=56;BaseQRankSum=9.758;DP=750;FS=3.407;HRun=0;HaplotypeScore=199.9770;InbreedingCoeff=0.4383;MQ=45.05;MQ0=32;MQRankSum=-1.862;QD=10.04;ReadPosRankSum=-0.111;VQSLOD=2.7417;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:30:25.09:0,25,314	0/1:10,0:10:3.28:3,0,52	0/1:54,0:9:13.23:13,0,92	0/0:68,0:11:4.67:0,5,104	1/1:30,0:30:17.28:176,17,0	0/0:22,0:22:0.35:0,0,578	0/0:31,0:31:60.95:0,61,1010	0/1:26,0:26:64.03:64,0,293	0/0:24,0:24:49.65:0,50,933	1/1:23,0:23:43.58:522,44,0	1/1:5,1:6:5.81:102,6,0	0/0:28,0:28:68.87:0,69,1478	0/0:23,0:23:42.08:0,42,954	1/1:16,7:23:26.94:435,27,0	0/0:18,0:18:11.73:0,12,469	0/1:13,0:13:8.21:8,0,46	1/1:22,1:22:39.98:372,40,0	1/1:25,0:24:34.92:567,35,0	0/1:22,0:20:47.95:48,0,165	0/1:26,1:27:2.60:276,0,3	0/1:61,0:58:94.26:272,0,94	0/0:21,0:21:36.04:0,36,661	0/0:21,0:21:40.79:0,41,615	0/0:43,0:42:61.55:0,62,1600	1/1:23,1:24:18.94:298,19,0	1/1:11,14:24:61.49:686,61,0	0/1:19,1:20:0.61:287,0,1	1/1:5,0:5:8.55:78,9,0
chr10	49984604	.	ATGTG	A	3792.01	PASS	AB=0.702;AC=26;AF=0.464;AN=56;BaseQRankSum=4.934;DP=747;FS=6.883;HRun=0;HaplotypeScore=199.0714;InbreedingCoeff=0.7292;MQ=44.00;MQ0=34;MQRankSum=-2.877;QD=11.29;ReadPosRankSum=1.938;VQSLOD=2.2129;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:29:14.93:0,15,139	0/0:3,0:9:5.51:0,6,59	0/0:58,0:11:7.52:0,8,67	0/0:66,0:12:8.02:0,8,64	0/1:18,1:31:16.49:71,0,16	0/0:22,0:22:30.24:0,30,561	0/0:32,0:33:48:0,48,869	1/1:16,7:23:24.02:302,24,0	0/0:23,0:24:39.13:0,39,893	1/1:16,1:23:1.40:246,1,0	1/1:5,0:7:5.79:54,6,0	0/0:24,0:28:65.15:0,65,1291	0/0:18,0:23:44.36:0,44,887	1/1:11,2:23:5.33:266,5,0	0/0:5,0:16:24.06:0,24,389	0/0:6,0:17:3.18:0,3,18	1/1:11,1:19:0.03:144,0,0	1/1:15,1:24:19.67:286,20,0	1/1:15,6:18:18:218,18,0	1/1:8,17:26:33.74:537,34,0	1/1:30,30:56:36.83:633,37,0	0/0:20,0:21:26.83:0,27,581	0/0:21,0:22:28.86:0,29,525	0/0:40,0:40:62.60:0,63,1432	1/1:12,2:22:15.19:145,15,0	1/1:17,0:24:27.47:351,27,0	1/1:4,15:20:33.11:512,33,0	0/1:4,0:7:0.19:28,0,0
chr10	49984855	.	TA	T	1523.25	PASS	AB=1.000;AC=52;AF=0.963;AN=54;BaseQRankSum=3.114;DP=229;FS=1.104;HRun=4;HaplotypeScore=287.9139;InbreedingCoeff=0.1646;MQ=55.37;MQ0=0;MQRankSum=-1.156;QD=6.68;ReadPosRankSum=2.162;VQSLOD=-0.0300;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,7:7:15.63:51,16,0	1/1:0,5:5:12.20:44,12,0	0/1:4,0:4:1.82:2,0,19	0/1:5,0:5:16.81:19,0,17	1/1:0,13:13:18.80:60,19,0	1/1:0,10:10:23.76:83,24,0	1/1:0,4:4:8.60:27,9,0	1/1:0,6:6:16.93:82,17,0	1/1:0,15:15:31.81:103,32,0	1/1:0,8:8:20:97,20,0	1/1:0,5:5:8.24:23,8,0	1/1:0,16:16:27.75:103,28,0	1/1:0,18:18:13.54:85,14,0	1/1:0,10:10:19.93:67,20,0	1/1:0,10:10:22.30:73,22,0	1/1:0,9:9:15.58:60,16,0	1/1:0,6:6:11.98:36,12,0	1/1:0,4:4:10.10:38,10,0	1/1:1,6:7:19.87:99,20,0	1/1:1,10:11:14.95:63,15,0	./.	1/1:1,5:6:2.17:21,2,0	1/1:0,5:5:10.03:31,10,0	1/1:0,3:3:4.66:12,5,0	1/1:0,14:14:30.44:96,30,0	1/1:0,12:12:21.83:120,22,0	1/1:0,13:13:29.39:110,29,0	1/1:0,2:2:5.17:20,5,0
chr10	49984858	.	C	CT	5815.73	PASS	AB=1.000;AC=53;AF=0.946;AN=56;BaseQRankSum=2.821;DP=399;FS=4.540;HRun=1;HaplotypeScore=503.1429;InbreedingCoeff=0.6918;MQ=40.36;MQ0=0;MQRankSum=-0.769;QD=14.72;ReadPosRankSum=0.033;VQSLOD=1.4988;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,7:16:42.85:273,43,0	1/1:2,5:7:17.30:103,17,0	0/1:1,0:1:0:0,0,0	0/0:3,0:4:6.75:0,7,49	1/1:8,13:21:45.19:243,45,0	1/1:6,10:16:42.62:224,43,0	1/1:5,4:9:24.64:138,25,0	1/1:11,6:17:30.70:230,31,0	1/1:7,15:22:62.03:353,62,0	1/1:9,8:17:46.82:380,47,0	1/1:5,5:10:24:100,24,0	1/1:9,16:25:67:378,67,0	1/1:7,18:25:51.33:312,51,0	1/1:10,10:20:53.19:298,53,0	1/1:7,10:17:37.69:209,38,0	1/1:5,9:14:34.90:170,35,0	1/1:7,6:13:30.92:185,31,0	1/1:0,4:4:11.53:62,12,0	1/1:10,7:17:47.55:354,48,0	1/1:6,10:16:29.31:182,29,0	1/1:4,1:5:8.73:76,9,0	1/1:11,5:15:38.77:252,39,0	1/1:5,5:10:26.38:113,26,0	1/1:6,3:9:18.90:110,19,0	1/1:6,14:20:56.32:300,56,0	1/1:12,12:24:63.03:441,63,0	1/1:8,13:21:46.18:298,46,0	1/1:1,2:3:5.80:32,6,0
chr10	49985570	.	AGTGTGTGT	A	5002.75	PASS	AB=0.581;AC=22;AF=0.423;AN=52;BaseQRankSum=7.909;DP=681;FS=0.000;HRun=0;HaplotypeScore=208.2136;InbreedingCoeff=0.8259;MQ=65.71;MQ0=4;MQRankSum=-7.834;QD=17.80;ReadPosRankSum=-0.475;VQSLOD=3.5329;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:57.17:0,57,2052	0/0:3,0:10:5.24:0,5,133	0/0:28,0:21:12.93:0,13,455	0/0:24,0:15:8.98:0,9,222	0/1:4,13:18:0:0,0,0	0/0:40,0:40:87.30:0,87,3235	0/0:15,0:15:36.12:0,36,1261	1/1:30,11:41:29.99:450,30,0	0/0:31,0:34:57.20:0,57,2231	1/1:7,13:21:42.09:946,42,0	0/1:5,10:15:0:1,0,0	0/0:26,0:26:66.23:0,66,2440	0/0:32,0:34:72.25:0,72,2782	1/1:9,16:25:6.02:154,6,0	0/0:5,0:36:59.96:0,60,540	0/0:24,0:26:60.21:0,60,2366	1/1:8,5:13:6.02:154,6,0	1/1:11,7:19:4.33:224,4,0	1/1:14,9:25:32.83:647,33,0	1/1:6,24:30:9.03:211,9,0	./.	0/0:21,0:24:60.21:0,60,2357	0/0:14,0:14:29.67:0,30,1206	0/0:28,0:30:69.24:0,69,2736	./.	1/1:12,23:35:62.95:1315,63,0	1/1:7,22:31:33.11:824,33,0	1/1:4,4:8:3.01:77,3,0
chr10	49986060	.	AAGGGCATTTCAGCATCGCC	A	11028.84	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=13.150;DP=599;FS=0.000;HRun=0;HaplotypeScore=304.9717;InbreedingCoeff=0.9602;MQ=76.01;MQ0=0;MQRankSum=-12.506;QD=88.23;ReadPosRankSum=3.407;VQSLOD=3.4888;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,129,10199	0/0:10,0:10:30.10:0,30,2378	0/0:24,0:24:66.22:0,66,3922	0/0:19,0:19:46.78:0,47,3284	1/1:4,12:16:12.04:644,12,0	0/0:12,0:12:33.10:0,33,2367	0/0:28,0:28:78.26:0,78,6064	0/0:31,0:31:87.30:0,87,6448	0/0:19,0:19:51.18:0,51,4349	1/1:4,13:17:39.13:2103,39,0	1/1:0,6:5:3.01:162,3,0	0/0:30,0:30:90.30:0,90,7387	0/0:24,0:24:69.24:0,69,5940	1/1:4,19:23:45.15:2425,45,0	0/0:30,0:30:90.31:0,90,7897	0/0:26,0:26:78.25:0,78,6545	1/1:3,9:12:15.05:809,15,0	1/1:6,7:13:15.05:809,15,0	0/0:20,0:20:54.19:0,54,3643	0/0:20,0:20:60.21:0,60,4719	0/0:50,0:50:99:0,148,11700	0/0:25,0:25:69.23:0,69,5772	0/0:10,0:10:27.09:0,27,2179	0/0:22,0:22:66.23:0,66,5380	1/1:0,11:11:21.07:1114,21,0	1/1:6,13:19:39.13:1993,39,0	0/0:29,0:29:84.27:0,84,6731	1/1:1,7:8:18.06:971,18,0
chr10	49986515	.	G	GTGCTTGCT	27470.91	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-10.761;DP=710;FS=8.835;HRun=0;HaplotypeScore=160.6827;InbreedingCoeff=0.9961;MQ=86.91;MQ0=0;MQRankSum=-17.007;QD=74.25;ReadPosRankSum=-2.313;VQSLOD=4.1489;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:84.25:0,84,2039	0/0:11,0:11:24.08:0,24,617	0/0:33,0:33:63.18:0,63,1303	0/0:26,0:26:48.15:0,48,1093	1/1:15,25:41:81.21:2783,81,0	0/0:28,0:28:63.19:0,63,1541	0/0:30,0:30:66.19:0,66,1534	1/1:15,13:30:57.16:1869,57,0	0/0:15,0:15:36.12:0,36,939	1/1:9,17:28:69.20:2720,69,0	1/1:12,10:23:36.12:1432,36,0	0/0:25,0:25:60.19:0,60,1535	0/0:26,0:26:63.22:0,63,1669	1/1:7,17:25:51.18:2021,51,0	0/0:33,0:33:84.29:0,84,2164	0/0:16,0:16:45.15:0,45,1149	1/1:5,18:24:45.15:1868,45,0	1/1:5,9:15:24.08:1018,24,0	1/1:15,15:32:81.25:2754,81,0	1/1:8,28:37:96.33:3788,96,0	1/1:15,9:26:18.06:763,18,0	0/0:30,0:30:81.28:0,81,2049	0/0:17,0:17:42.13:0,42,988	0/0:20,0:20:51.18:0,51,1351	1/1:5,14:21:39.13:1585,39,0	1/1:12,8:21:36.10:1357,36,0	1/1:13,20:37:71.84:2877,72,0	1/1:0,8:8:15.05:636,15,0
chr10	49987509	.	CCGGT	C	5995.23	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=11.860;DP=649;FS=6.720;HRun=0;HaplotypeScore=111.9300;InbreedingCoeff=0.9997;MQ=85.55;MQ0=0;MQRankSum=-6.683;QD=53.06;ReadPosRankSum=-0.117;VQSLOD=5.5750;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,151,4240	0/0:10,0:10:30.10:0,30,786	0/0:25,0:25:68.11:0,68,1653	0/0:21,0:21:63.22:0,63,1661	0/0:20,0:20:57.20:0,57,1605	0/0:17,0:17:48.16:0,48,1360	0/0:17,0:17:48.13:0,48,1243	1/1:0,26:26:78.27:1628,78,0	0/0:22,0:22:66.19:0,66,1605	0/0:22,0:22:63.19:0,63,1679	0/0:14,0:14:39.12:0,39,1065	0/0:30,0:30:74.92:0,75,2014	0/0:25,0:25:66.23:0,66,1830	0/0:26,0:26:72.25:0,72,2060	0/0:29,0:29:84.29:0,84,2278	0/0:21,0:21:63.20:0,63,1638	0/0:34,0:34:99:0,99,2604	0/0:29,0:29:87.28:0,87,2319	1/1:0,14:14:33.11:662,33,0	1/1:0,16:16:39.13:816,39,0	1/1:0,41:41:99:2137,102,0	0/0:17,0:17:48.16:0,48,1345	0/0:12,0:12:36.12:0,36,984	0/0:34,0:34:99:0,102,2810	0/0:25,0:25:72.25:0,72,2005	0/0:15,0:15:45.15:0,45,1241	1/1:0,16:16:36.11:752,36,0	0/0:20,0:20:57.20:0,57,1622
chr10	49987640	.	TCTGC	T	1335.30	PASS	AB=0.873;AC=19;AF=0.365;AN=52;BaseQRankSum=3.041;DP=559;FS=4.913;HRun=0;HaplotypeScore=92.3592;InbreedingCoeff=0.3841;MQ=46.17;MQ0=30;MQRankSum=0.130;QD=5.68;ReadPosRankSum=3.092;VQSLOD=0.9445;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:12,7:19:52.53:129,0,53	0/1:8,0:7:0:0,0,0	0/0:18,0:10:8.82:0,9,129	0/1:23,0:17:5.62:6,0,165	./.	0/1:14,0:13:0:0,0,0	0/0:40,0:39:44.85:0,45,918	0/0:16,0:15:8.55:0,9,52	0/0:10,0:8:15.04:0,15,299	1/1:15,8:21:8.28:276,8,0	./.	0/0:25,0:24:39.07:0,39,727	0/0:20,0:20:28.90:0,29,577	1/1:12,10:21:6.02:97,6,0	1/1:10,11:20:21.07:327,21,0	1/1:3,7:10:9.03:145,9,0	1/1:14,16:30:12.51:195,13,0	0/1:11,6:14:42.39:42,0,46	0/0:14,0:9:3.01:0,3,53	0/0:7,0:5:3.01:0,3,37	0/0:65,0:57:28.10:0,28,304	0/0:12,0:10:13.29:0,13,234	0/0:17,0:17:2.60:0,3,10	0/0:49,1:46:26.49:0,26,1444	0/1:21,0:18:7.95:94,0,8	1/1:14,4:18:8.53:144,9,0	0/0:7,0:7:3.01:0,3,51	0/1:4,5:8:42.42:42,0,44
chr10	49988532	.	TCTGC	T	99.69	PASS	AB=1.000;AC=7;AF=0.159;AN=44;BaseQRankSum=2.858;DP=366;FS=4.653;HRun=0;HaplotypeScore=33.7335;InbreedingCoeff=0.3838;MQ=32.66;MQ0=143;MQRankSum=0.977;QD=2.08;ReadPosRankSum=0.690;VQSLOD=0.9191;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:5:6.02:0,6,91	1/1:8,0:7:3.01:46,3,0	./.	./.	0/0:9,0:3:0.47:0,0,1	0/0:7,0:6:6.02:0,6,138	0/0:42,0:19:27.05:0,27,537	./.	0/0:7,0:5:9.03:0,9,213	0/0:11,0:2:3.01:0,3,42	0/0:4,0:3:3.47:0,3,26	0/0:15,0:6:18.05:0,18,332	0/0:8,0:3:3.01:0,3,71	0/0:17,0:3:6.02:0,6,83	1/1:6,4:6:9.03:140,9,0	0/0:4,0:4:2.90:0,3,16	0/1:19,0:11:3.90:4,0,289	0/0:22,0:16:8.13:0,8,449	1/1:11,0:6:3.27:14,3,0	./.	0/0:43,0:15:0.47:0,0,1	0/0:6,0:2:6.02:0,6,121	./.	0/0:38,0:27:39.01:0,39,621	0/0:21,0:6:9.50:0,10,156	0/0:17,0:2:3.01:0,3,38	0/0:8,0:3:0:0,0,0	./.
chr10	49988631	.	CTCTT	C	6647.68	PASS	AC=16;AF=0.296;AN=54;BaseQRankSum=12.152;DP=458;FS=19.678;HRun=0;HaplotypeScore=86.9579;InbreedingCoeff=0.9980;MQ=74.90;MQ0=0;MQRankSum=-3.586;QD=48.17;ReadPosRankSum=4.440;VQSLOD=3.7403;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:48.16:0,48,1280	0/0:14,0:14:39.13:0,39,1040	0/0:21,0:20:51.14:0,51,1037	0/0:16,0:16:42.03:0,42,909	1/1:0,11:11:33.11:592,33,0	0/0:17,0:17:51.18:0,51,1353	0/0:29,0:29:87.30:0,87,2186	0/0:12,0:12:30.10:0,30,801	0/0:17,0:17:48.16:0,48,1240	1/1:0,15:15:45.13:778,45,0	1/1:0,7:7:18.06:336,18,0	0/0:21,0:21:54.19:0,54,1429	0/0:15,0:15:45.15:0,45,1092	1/1:1,12:13:30.10:559,30,0	0/0:12,0:11:36.12:0,36,922	0/0:10,0:10:27.09:0,27,720	1/1:1,20:20:51.17:952,51,0	1/1:1,23:24:63.22:1176,63,0	0/0:18,0:17:48.15:0,48,1225	0/0:27,0:27:81.28:0,81,2059	0/0:14,0:14:33.11:0,33,873	0/0:11,0:11:33.11:0,33,841	0/0:13,0:13:39.13:0,39,1040	0/0:24,0:24:66.22:0,66,1668	1/1:4,26:30:75.26:1399,75,0	1/1:0,17:16:48.14:855,48,0	0/0:11,0:11:30.10:0,30,800	./.
chr10	49989277	.	G	GT	12275.61	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-17.368;DP=813;FS=4.411;HRun=1;HaplotypeScore=71.1125;InbreedingCoeff=0.9996;MQ=80.91;MQ0=0;MQRankSum=-0.522;QD=44.32;ReadPosRankSum=0.026;VQSLOD=4.5023;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,49:49:99:2109,132,0	0/0:16,0:16:48.14:0,48,653	0/0:19,0:19:57.15:0,57,772	0/0:22,0:22:66.19:0,66,891	0/0:31,0:31:90.30:0,90,1259	0/0:37,0:37:99:0,111,1534	0/0:16,0:16:48.16:0,48,670	1/1:0,27:27:81.26:1265,81,0	0/0:20,0:20:60.19:0,60,822	0/0:29,0:29:84.28:0,84,1172	0/0:17,0:17:45.15:0,45,629	0/0:27,0:27:81.27:0,81,1129	0/0:42,0:42:99:0,126,1759	0/0:27,0:27:81.27:0,81,1131	0/0:39,0:39:99:0,117,1617	1/1:2,37:39:24.44:1547,24,0	0/0:28,0:28:72.24:0,72,1004	0/0:20,0:20:60.17:0,60,819	1/1:1,29:30:90.30:1408,90,0	1/1:1,40:41:99:1870,117,0	1/1:0,56:56:99:2494,157,0	0/0:32,0:32:90.28:0,90,1237	0/0:20,0:20:60.20:0,60,839	0/0:30,0:30:87.28:0,87,1197	0/0:27,0:27:81.24:0,81,1098	0/0:25,0:25:66.21:0,66,906	1/1:1,34:35:99:1582,99,0	0/0:12,0:12:36.10:0,36,484
chr10	49989698	.	CA	C	11933.93	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=20.326;DP=686;FS=2.363;HRun=2;HaplotypeScore=117.9640;InbreedingCoeff=0.9996;MQ=88.59;MQ0=0;MQRankSum=-3.313;QD=35.20;ReadPosRankSum=3.191;VQSLOD=4.5974;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:81.22:0,81,1177	0/0:10,0:10:30.09:0,30,430	0/0:19,0:19:51.15:0,51,726	0/0:30,0:30:78.13:0,78,1072	1/1:1,18:19:51.12:643,51,0	0/0:28,0:28:81.26:0,81,1192	0/0:27,0:27:81.23:0,81,1153	1/1:3,35:38:96.28:1216,96,0	0/0:25,0:25:75.25:0,75,1124	1/1:1,26:27:78.25:1012,78,0	1/1:0,15:15:39.13:506,39,0	0/0:29,0:29:84.26:0,84,1217	0/0:26,0:26:78.25:0,78,1132	1/1:0,17:17:48.16:623,48,0	0/0:29,0:29:84.24:0,84,1198	0/0:33,0:33:99:0,99,1427	1/1:0,25:25:72.23:935,72,0	1/1:0,9:9:24.08:311,24,0	1/1:2,23:25:72.21:907,72,0	1/1:1,22:23:66.17:837,66,0	1/1:1,39:40:99:1440,111,0	0/0:18,0:18:54.17:0,54,790	0/0:27,0:27:75.23:0,75,1079	0/0:19,0:19:57.19:0,57,854	1/1:2,23:25:60.19:779,60,0	1/1:1,25:26:72.23:935,72,0	1/1:1,29:30:84.27:1089,84,0	1/1:0,20:20:54.18:701,54,0
chr10	49989990	.	T	TA	4464.17	PASS	AB=0.929;AC=19;AF=0.339;AN=56;BaseQRankSum=-8.734;DP=567;FS=14.562;HRun=7;HaplotypeScore=62.0811;InbreedingCoeff=0.9437;MQ=71.75;MQ0=3;MQRankSum=1.665;QD=22.89;ReadPosRankSum=2.231;VQSLOD=3.7617;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:53.14:0,53,564	0/0:10,0:10:27.03:0,27,255	0/1:23,1:11:3.30:3,0,66	0/0:22,1:17:18.17:0,18,224	1/1:0,15:15:33.10:399,33,0	0/0:18,0:18:44.74:0,45,416	0/0:17,0:17:45.06:0,45,429	0/0:29,0:28:57.06:0,57,543	0/0:29,0:29:81.12:0,81,782	1/1:8,16:24:48.13:566,48,0	1/1:3,19:22:51.07:582,51,0	0/0:20,0:20:48.07:0,48,463	0/0:26,0:26:69.06:0,69,652	1/1:1,20:21:45.14:544,45,0	0/0:21,0:21:48.04:0,48,454	0/0:16,0:16:42.03:0,42,395	1/1:2,22:24:51.16:615,51,0	1/1:3,14:18:32.24:407,32,0	0/0:19,0:19:54.07:0,54,516	0/0:22,0:22:59.11:0,59,602	0/0:16,0:16:42.06:0,42,400	0/0:15,0:15:42.07:0,42,406	0/0:13,0:13:36.06:0,36,348	0/0:24,0:24:66.08:0,66,631	1/1:3,15:18:38.14:501,38,0	1/1:1,11:12:33.10:399,33,0	0/0:30,0:29:63.09:0,63,607	1/1:1,13:15:38.99:449,39,0
chr10	49991166	.	TC	T	6444.75	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=11.693;DP=671;FS=3.027;HRun=8;HaplotypeScore=69.9273;InbreedingCoeff=0.9985;MQ=84.78;MQ0=0;MQRankSum=-6.541;QD=25.47;ReadPosRankSum=-0.009;VQSLOD=5.5792;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,24:28:72.11:695,72,0	1/1:2,9:11:27.03:260,27,0	0/0:20,0:21:35.56:0,36,508	0/0:26,0:26:54.13:0,54,574	0/0:23,0:23:63.19:0,63,759	0/0:18,0:18:48.15:0,48,579	0/0:19,0:19:48.15:0,48,580	1/1:1,23:24:66.09:631,66,0	0/0:28,0:28:78.20:0,78,926	0/0:14,0:14:42.13:0,42,507	0/0:21,0:21:45.14:0,45,543	0/0:27,0:27:75.23:0,75,905	0/0:20,0:20:60.17:0,60,714	0/0:29,0:29:78.22:0,78,922	1/1:1,32:34:92.18:875,92,0	1/1:5,34:39:74.93:1006,75,0	0/0:28,0:28:78.23:0,78,932	0/0:26,0:26:72.22:0,72,869	1/1:3,18:21:51.06:487,51,0	1/1:3,29:32:87.13:839,87,0	1/1:2,34:36:96.15:927,96,0	0/0:24,0:24:66.17:0,66,771	0/0:21,0:21:57.15:0,57,665	0/0:27,0:27:66.20:0,66,798	0/0:22,0:22:54.12:0,54,618	0/0:18,0:18:45.12:0,45,523	1/1:4,24:28:75.11:724,75,0	0/0:6,0:6:18.06:0,18,217
chr10	49991174	.	CA	C	659.70	PASS	AB=0.992;AC=12;AF=0.214;AN=56;BaseQRankSum=18.289;DP=697;FS=0.000;HRun=1;HaplotypeScore=91.1171;InbreedingCoeff=0.3878;MQ=85.98;MQ0=0;MQRankSum=-7.558;QD=2.47;ReadPosRankSum=3.984;VQSLOD=-0.6625;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:26:5.60:101,6,0	0/1:10,0:10:4.10:34,0,4	0/0:23,0:24:28.77:0,29,744	0/0:27,2:29:58.22:0,58,810	0/0:26,0:26:78.09:0,78,951	0/0:19,0:19:57.07:0,57,722	0/0:21,0:21:63.13:0,63,778	0/1:28,0:28:27.28:27,0,84	0/0:27,0:27:81.24:0,81,1091	0/0:15,0:15:42.14:0,42,584	0/0:16,0:16:48.14:0,48,626	0/0:29,0:29:84.23:0,84,1104	0/0:25,0:25:75.17:0,75,947	0/0:29,0:29:81.18:0,81,1058	0/1:40,0:40:75.83:76,0,91	0/1:40,2:42:75.14:165,0,75	0/0:27,0:27:78.21:0,78,1050	0/0:25,0:25:75.19:0,75,1004	0/1:23,0:23:26.19:26,0,83	1/1:33,0:33:20.36:170,20,0	0/1:37,0:37:1.92:96,0,2	0/0:27,0:27:77.84:0,78,909	0/0:20,0:20:57.08:0,57,734	0/0:31,0:31:87.15:0,87,1086	0/0:18,0:18:52.01:0,52,671	0/0:16,0:16:45.06:0,45,583	1/1:28,0:28:4.29:122,4,0	0/0:6,0:6:18.06:0,18,247
chr10	49995806	.	CT	C	2835.90	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=13.918;DP=344;FS=3.025;HRun=1;HaplotypeScore=166.4245;InbreedingCoeff=0.9452;MQ=88.48;MQ0=0;MQRankSum=-13.332;QD=19.16;ReadPosRankSum=3.792;VQSLOD=4.1044;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,6:7:11.97:96,12,0	1/1:0,4:4:11.99:104,12,0	0/0:17,0:17:44.96:0,45,588	0/0:14,0:14:36.03:0,36,499	0/0:22,0:22:66.23:0,66,1051	1/1:2,14:16:41.14:328,41,0	1/1:1,6:7:16.43:117,16,0	1/1:0,5:5:15.01:135,15,0	1/1:2,11:13:35.61:286,36,0	0/0:15,0:15:45.15:0,45,701	0/0:20,0:20:60.19:0,60,930	1/1:3,4:7:20.72:163,21,0	1/1:2,12:14:40.76:330,41,0	0/0:20,0:20:60.19:0,60,936	1/1:0,10:10:29.56:239,30,0	1/1:2,11:13:38.94:326,39,0	0/0:13,0:13:39.13:0,39,618	0/0:14,0:14:42.14:0,42,671	1/1:0,7:7:21:186,21,0	1/1:2,14:16:36.90:253,37,0	1/1:1,2:3:2.62:24,3,0	1/1:0,3:3:8.99:77,9,0	1/1:1,6:7:20.53:154,21,0	1/1:1,8:9:11.80:99,12,0	0/0:27,0:27:81.28:0,81,1285	0/0:26,0:26:78.27:0,78,1247	1/1:1,6:7:19.79:144,20,0	0/0:8,0:8:24.01:0,24,308
chr10	49995809	.	ACTAATTGAACTAATT	A	14047.59	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=15.030;DP=324;FS=3.729;HRun=0;HaplotypeScore=219.3395;InbreedingCoeff=0.9483;MQ=87.93;MQ0=0;MQRankSum=-14.080;QD=104.83;ReadPosRankSum=4.675;VQSLOD=4.5833;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,6:6:18.06:596,18,0	1/1:0,4:4:12.04:491,12,0	0/0:16,0:16:45.15:0,45,1557	0/0:13,0:13:36.08:0,36,1329	0/0:23,0:23:69.20:0,69,4738	1/1:1,14:15:44.18:1580,44,0	1/1:1,6:7:18.06:686,18,0	1/1:0,5:5:15.05:617,15,0	1/1:0,11:11:33.11:1218,33,0	0/0:16,0:16:48.16:0,48,3350	0/0:18,0:18:54.19:0,54,4086	1/1:2,4:6:17.09:527,17,0	1/1:0,12:12:36.12:1427,36,0	0/0:19,0:19:57.20:0,57,3999	1/1:0,10:10:30.10:1164,30,0	1/1:1,11:12:36.12:1380,36,0	0/0:13,0:13:39.13:0,39,2671	0/0:14,0:14:42.10:0,42,2677	1/1:1,5:6:18.05:648,18,0	1/1:0,14:14:42.14:1402,42,0	1/1:0,2:2:2.78:81,3,0	1/1:0,3:3:9.03:367,9,0	1/1:0,6:6:18.06:679,18,0	1/1:0,8:8:15.04:513,15,0	0/0:27,0:27:81.28:0,81,5445	0/0:26,0:26:78.27:0,78,5813	1/1:1,6:7:21.04:671,21,0	0/0:5,0:5:15.05:0,15,913
chr10	49995826	.	GTTCCCTT	G	8875.94	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=14.837;DP=319;FS=0.000;HRun=0;HaplotypeScore=179.9595;InbreedingCoeff=0.9455;MQ=82.87;MQ0=0;MQRankSum=-14.151;QD=67.76;ReadPosRankSum=4.454;VQSLOD=4.9678;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,6:6:18.06:393,18,0	1/1:0,4:4:12.04:319,12,0	0/0:10,0:10:20.09:0,20,558	0/0:14,0:14:39.09:0,39,1067	0/0:22,0:22:66.23:0,66,2682	1/1:0,14:14:42.14:982,42,0	1/1:0,6:6:18.06:429,18,0	1/1:0,7:7:21.04:451,21,0	1/1:0,11:11:33.11:782,33,0	0/0:22,0:22:66.23:0,66,2725	0/0:22,0:22:66.23:0,66,2736	1/1:0,4:4:12.04:317,12,0	1/1:0,12:12:36.12:911,36,0	0/0:17,0:17:51.18:0,51,2136	1/1:0,10:10:30.10:735,30,0	1/1:0,11:11:33.11:875,33,0	0/0:14,0:14:39.13:0,39,1636	0/0:13,0:13:39.13:0,39,1635	1/1:0,5:5:15.05:404,15,0	1/1:0,16:16:45.14:865,45,0	1/1:0,2:2:3.01:42,3,0	1/1:0,3:3:9.03:238,9,0	1/1:0,6:6:18.05:423,18,0	1/1:0,8:8:15.05:318,15,0	0/0:22,0:22:66.20:0,66,2621	0/0:27,0:27:78.27:0,78,3275	1/1:0,6:6:18.06:391,18,0	0/0:5,0:5:15.05:0,15,629
chr10	49996352	.	C	CTCA	16962.72	PASS	AB=1.000;AC=33;AF=0.589;AN=56;BaseQRankSum=19.619;DP=757;FS=2.733;HRun=0;HaplotypeScore=166.2651;InbreedingCoeff=0.9261;MQ=83.03;MQ0=0;MQRankSum=-6.636;QD=35.49;ReadPosRankSum=4.439;VQSLOD=5.7272;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:44,0:44:99:1602,116,0	1/1:13,0:13:39.10:514,39,0	0/0:28,0:28:75.24:0,75,1252	0/0:22,0:22:63.15:0,63,1008	0/0:38,0:38:99:0,111,1861	1/1:19,0:19:54.17:761,54,0	1/1:22,0:22:63.18:893,63,0	1/1:36,0:36:23.53:1123,24,0	1/1:33,0:33:70.34:1211,70,0	0/0:29,0:29:84.24:0,84,1377	0/0:26,0:26:72.25:0,72,1228	1/1:36,0:36:93.77:1329,94,0	1/1:35,0:35:87.25:1240,87,0	0/0:28,0:28:84.29:0,84,1433	1/1:35,0:35:93.30:1311,93,0	1/1:34,0:34:60.20:1114,60,0	0/0:29,0:29:86.60:0,87,1374	0/0:16,0:16:45.11:0,45,736	0/1:28,0:28:20.71:728,0,21	1/1:25,0:25:69.23:970,69,0	1/1:20,0:20:57.16:766,57,0	1/1:25,2:31:75.72:1074,76,0	1/1:24,0:24:59.85:894,60,0	1/1:22,0:22:30.36:707,30,0	0/0:25,0:25:75.26:0,75,1279	0/0:29,0:29:84.28:0,84,1383	1/1:21,0:21:32.71:725,33,0	0/0:9,0:9:24.03:0,24,329
chr10	49996354	.	C	CA	10617.03	PASS	AB=0.596;AC=33;AF=0.589;AN=56;BaseQRankSum=20.314;DP=756;FS=4.459;HRun=0;HaplotypeScore=160.3530;InbreedingCoeff=0.9496;MQ=83.35;MQ0=0;MQRankSum=-6.729;QD=22.35;ReadPosRankSum=5.522;VQSLOD=5.4335;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,38:44:99:986,108,0	1/1:4,11:15:38.81:349,39,0	0/0:27,0:27:78.25:0,78,1076	0/0:23,0:23:66.13:0,66,857	0/0:39,0:39:99:0,111,1530	1/1:2,17:19:56.74:498,57,0	1/1:3,20:23:62.75:549,63,0	1/1:8,26:34:29.42:600,29,0	1/1:4,28:32:81.93:828,82,0	0/0:30,0:30:84.24:0,84,1135	0/0:26,0:26:75.25:0,75,1045	1/1:8,29:37:86.73:798,87,0	1/1:6,27:33:86.84:763,87,0	0/0:28,0:28:84.28:0,84,1173	1/1:3,31:34:52.26:824,52,0	1/1:9,24:33:42.96:698,43,0	0/0:30,0:30:86.47:0,86,1161	0/0:15,0:15:45.11:0,45,607	0/1:9,19:28:3.16:474,0,3	1/1:3,21:24:68.65:604,69,0	1/1:2,18:20:56.74:507,57,0	1/1:7,24:31:78.02:728,78,0	1/1:5,20:25:59.32:486,59,0	1/1:3,18:21:30.96:481,31,0	0/0:25,0:25:75.25:0,75,1048	0/0:30,0:30:90.11:0,90,1193	1/1:5,17:22:41.54:444,42,0	0/0:8,0:8:24.03:0,24,282
chr10	49996355	.	G	GCT	16185.50	PASS	AB=0.616;AC=32;AF=0.571;AN=56;BaseQRankSum=20.201;DP=775;FS=2.669;HRun=0;HaplotypeScore=163.1960;InbreedingCoeff=0.8590;MQ=81.31;MQ0=0;MQRankSum=-6.314;QD=32.37;ReadPosRankSum=4.589;VQSLOD=6.5772;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,38:45:99:1527,99,0	1/1:3,11:14:42.07:525,42,0	0/0:27,0:27:78.27:0,78,1246	0/0:21,0:21:59.99:0,60,929	0/0:40,0:40:99:0,114,1793	1/1:3,17:20:36.27:686,36,0	1/1:4,20:24:69.19:881,69,0	0/1:15,26:41:8.81:1095,0,9	1/1:6,28:34:52.41:1153,52,0	0/0:29,0:29:81.26:0,81,1289	0/0:27,0:27:75.26:0,75,1211	1/1:10,29:39:99:1257,101,0	1/1:8,26:35:87.25:1122,87,0	0/0:28,0:28:84.29:0,84,1370	1/1:4,31:35:99:1321,99,0	1/1:12,24:36:46.22:1078,46,0	0/0:29,0:29:74.95:0,75,1319	0/0:15,0:15:42.14:0,42,685	0/1:12,19:31:31.54:847,0,32	1/1:4,21:25:69.21:906,69,0	1/1:1,18:19:51.15:678,51,0	1/1:8,24:32:57.97:1007,58,0	1/1:5,20:25:60:745,60,0	1/1:4,18:22:26.79:678,27,0	0/0:25,0:25:75.26:0,75,1223	0/0:29,0:29:87.23:0,87,1344	1/1:5,15:23:18.25:681,18,0	0/0:5,0:5:15.05:0,15,244
chr10	49996743	.	AG	A	3078.57	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=13.265;DP=693;FS=6.223;HRun=2;HaplotypeScore=66.4067;InbreedingCoeff=0.9849;MQ=55.33;MQ0=29;MQRankSum=5.627;QD=32.41;ReadPosRankSum=3.261;VQSLOD=3.5585;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,42:43:88.70:1450,89,0	1/1:0,15:15:42.14:545,42,0	0/0:26,0:4:12.04:0,12,180	0/0:38,0:6:15.05:0,15,225	0/0:32,0:32:96.32:0,96,1433	0/0:23,0:23:66.20:0,66,950	0/0:27,0:27:78.25:0,78,1146	0/0:32,0:31:90.29:0,90,1309	0/0:20,0:20:57.19:0,57,854	0/0:26,0:26:78.26:0,78,1167	0/0:19,0:19:57.18:0,57,832	0/0:16,0:16:48.16:0,48,715	0/0:29,0:29:87.28:0,87,1276	0/0:20,0:20:57.19:0,57,853	1/1:0,21:21:51.17:662,51,0	1/1:0,16:16:45.15:582,45,0	0/0:30,0:30:90.30:0,90,1345	0/0:26,0:25:75.17:0,75,1034	0/0:21,0:21:60.15:0,60,817	0/0:37,0:37:99:0,108,1599	0/0:40,0:40:99:0,120,1752	0/0:22,0:22:66.09:0,66,957	0/0:25,0:25:75.23:0,75,1078	0/0:16,0:16:48.16:0,48,714	0/0:14,0:14:39.13:0,39,584	0/0:26,0:25:72.18:0,72,1017	0/0:27,0:27:81.27:0,81,1213	0/0:6,0:6:18.06:0,18,270
chr10	49998907	.	AT	A	12572.37	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=10.806;DP=673;FS=2.971;HRun=5;HaplotypeScore=67.9544;InbreedingCoeff=0.9704;MQ=87.52;MQ0=0;MQRankSum=-4.834;QD=30.52;ReadPosRankSum=3.321;VQSLOD=5.6535;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,44:44:99:1429,126,0	1/1:0,4:4:12.03:136,12,0	0/0:25,0:25:56.91:0,57,715	0/0:27,0:27:66.18:0,66,859	0/0:30,0:30:84.24:0,84,1127	1/1:3,25:28:69.19:783,69,0	1/1:3,25:28:72.20:817,72,0	1/1:4,30:34:90.24:1011,90,0	1/1:3,19:22:57.16:647,57,0	0/0:21,0:21:57.17:0,57,752	0/0:26,0:26:69.22:0,69,927	1/1:0,15:15:45.13:510,45,0	1/1:0,21:21:63.18:714,63,0	0/0:29,0:29:87.29:0,87,1180	1/1:1,19:20:48.14:545,48,0	1/1:0,31:31:93.27:1055,93,0	0/0:29,0:29:81.27:0,81,1107	0/0:16,0:16:45.11:0,45,588	1/1:2,10:12:30.08:333,30,0	1/1:1,25:26:75.21:850,75,0	1/1:1,18:19:48.14:545,48,0	1/1:1,29:30:81.23:919,81,0	1/1:0,18:18:51.15:578,51,0	1/1:0,21:21:63.18:715,63,0	0/0:22,0:22:63.21:0,63,862	0/0:31,0:31:87.29:0,87,1182	1/1:4,35:39:87.24:987,87,0	0/0:5,0:5:3.01:0,3,41
chr10	49999139	.	A	AT	2072	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-10.441;DP=585;FS=2.131;HRun=9;HaplotypeScore=56.7077;InbreedingCoeff=0.9699;MQ=74.05;MQ0=0;MQRankSum=-0.977;QD=22.52;ReadPosRankSum=2.169;VQSLOD=4.5694;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,34:38:58.16:861,58,0	1/1:0,9:9:24.06:265,24,0	0/0:16,0:15:6.97:0,7,178	0/0:12,0:12:21.59:0,22,154	0/0:20,0:20:28.78:0,29,417	0/0:29,0:29:83.96:0,84,725	0/0:21,0:21:50.99:0,51,443	0/0:19,0:19:47.93:0,48,405	0/0:20,0:20:47.97:0,48,417	0/0:25,0:25:59.96:0,60,519	0/0:21,0:21:53.92:0,54,457	0/0:30,0:30:74.91:0,75,635	0/0:23,0:23:56.95:0,57,489	0/0:28,0:28:74.94:0,75,642	1/1:2,21:23:59.75:641,60,0	1/1:6,16:22:42.11:465,42,0	0/0:21,0:21:53.95:0,54,460	0/0:18,0:18:38.90:0,39,330	0/0:15,0:15:38.98:0,39,335	0/0:24,0:24:62.95:0,63,537	0/0:18,0:18:44.89:0,45,371	0/0:15,0:15:41.17:0,41,336	0/0:13,0:13:35.97:0,36,308	0/0:22,0:22:53.95:0,54,466	0/0:16,0:16:38.96:0,39,333	0/0:31,0:31:83.90:0,84,717	0/0:30,0:30:80.97:0,81,703	0/0:6,0:6:15:0,15,130
chr10	50000838	.	GAGT	G	8353.71	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=12.388;DP=736;FS=4.141;HRun=0;HaplotypeScore=108.3473;InbreedingCoeff=0.9611;MQ=76.35;MQ0=3;MQRankSum=-0.472;QD=20.83;ReadPosRankSum=1.274;VQSLOD=4.5565;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:53.44:0,53,1456	1/1:2,9:11:14.66:216,15,0	0/0:36,0:33:52.37:0,52,854	0/0:33,0:32:28.82:0,29,616	0/0:20,0:20:0.64:0,1,534	1/1:8,25:34:39.10:541,39,0	1/1:6,30:37:51.09:711,51,0	1/1:8,18:26:54.05:583,54,0	1/1:5,15:20:30.10:434,30,0	0/0:28,0:27:60.10:0,60,790	0/0:11,0:11:21:0,21,247	1/1:6,16:23:36.12:520,36,0	1/1:6,22:28:48.05:687,48,0	0/0:22,0:22:48.08:0,48,829	1/1:6,31:37:63.17:887,63,0	0/0:27,0:27:75.13:0,75,1344	0/0:25,0:25:72.16:0,72,1285	0/0:31,0:31:57.16:0,57,1091	1/1:6,11:16:29.70:339,30,0	1/1:4,11:15:18.06:254,18,0	1/1:5,30:36:54.18:781,54,0	1/1:2,16:18:20.98:257,21,0	1/1:3,14:17:21:278,21,0	1/1:6,37:43:72.24:1041,72,0	0/0:15,0:15:30.05:0,30,470	0/0:28,0:28:75.16:0,75,1151	1/1:7,32:39:57.19:824,57,0	0/0:16,0:16:45.10:0,45,801
chr10	50000990	.	G	GGTGT	1967.98	PASS	AB=0.839;AC=20;AF=0.357;AN=56;BaseQRankSum=3.386;DP=449;FS=22.958;HRun=0;HaplotypeScore=94.2939;InbreedingCoeff=0.6693;MQ=59.08;MQ0=22;MQRankSum=0.922;QD=10.47;ReadPosRankSum=-3.043;VQSLOD=0.1648;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:13:15.49:185,15,0	0/1:10,0:9:27.53:44,0,28	0/0:27,0:18:3.01:0,3,48	0/0:27,0:18:17.92:0,18,247	0/0:6,0:6:3:0,3,25	1/1:20,0:19:22.26:311,22,0	1/1:29,0:24:15.51:228,16,0	0/0:28,0:26:33.57:0,34,400	1/1:16,0:16:7.74:79,8,0	0/0:14,0:14:15.01:0,15,230	0/0:6,0:6:0.47:0,0,1	0/1:11,7:21:0:0,0,0	1/1:22,0:22:31.76:417,32,0	0/0:15,0:13:14.69:0,15,226	0/0:18,0:18:2.68:0,3,7	1/1:3,10:15:5.81:79,6,0	0/0:20,0:17:3.65:0,4,255	0/0:19,0:19:14.11:0,14,433	0/0:15,0:15:12.04:0,12,147	0/0:5,0:5:3.79:0,4,107	0/0:24,0:22:21.54:0,22,272	1/1:12,0:12:16.28:204,16,0	1/1:11,0:11:19.44:199,19,0	1/1:19,0:17:27.07:409,27,0	0/0:4,0:3:3.01:0,3,46	0/0:17,0:16:12.04:0,12,187	0/0:12,0:12:15.03:0,15,168	0/0:4,0:2:6.02:0,6,75
chr10	50001018	.	TGAGAGA	T	612.10	PASS	AB=0.949;AC=16;AF=0.308;AN=52;BaseQRankSum=1.394;DP=423;FS=3.330;HRun=0;HaplotypeScore=107.9967;InbreedingCoeff=0.1402;MQ=50.41;MQ0=31;MQRankSum=2.062;QD=2.82;ReadPosRankSum=-2.565;VQSLOD=1.2183;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:10:9.03:0,9,185	0/0:7,0:6:12.04:0,12,335	./.	./.	0/0:5,0:5:12.03:0,12,289	0/0:13,0:12:12.04:0,12,316	1/1:21,0:17:9:144,9,0	1/1:28,0:16:2.40:24,2,0	0/1:15,0:14:2.97:3,0,138	0/0:16,0:16:30.06:0,30,655	0/0:2,0:6:3.01:0,3,37	0/0:19,0:19:12.44:0,12,140	0/1:22,0:22:7.29:7,0,393	0/0:16,0:14:9.03:0,9,180	0/0:18,0:18:33.11:0,33,833	0/1:20,0:20:45.03:45,0,226	0/0:23,0:20:22.59:0,23,520	0/0:20,0:20:2.74:0,3,527	0/0:9,0:8:2.97:0,3,20	0/1:5,11:15:48.32:49,0,48	1/1:21,0:18:18.03:253,18,0	0/1:14,0:14:41.79:42,0,302	0/1:14,0:14:28.98:29,0,337	0/1:21,0:19:14.93:15,0,286	0/0:14,0:13:10.98:0,11,414	0/1:15,0:13:4.84:5,0,492	1/1:9,0:9:11.94:152,12,0	0/0:8,0:6:1.78:0,2,102
chr10	50001112	.	CTTT	C	3561.44	PASS	AB=0.577;AC=28;AF=0.500;AN=56;BaseQRankSum=5.137;DP=309;FS=7.719;HRun=13;HaplotypeScore=57.0178;InbreedingCoeff=0.7897;MQ=76.73;MQ0=6;MQRankSum=-0.556;QD=21.20;ReadPosRankSum=2.391;VQSLOD=1.9741;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:39.13:0,39,715	1/1:1,5:6:9.02:109,9,0	0/0:14,0:11:11.62:0,12,120	0/0:9,0:7:8.63:0,9,45	0/0:9,0:9:15.91:0,16,225	1/1:2,6:8:18.04:218,18,0	0/1:1,5:6:22.56:164,0,23	1/1:7,16:23:36.64:460,37,0	1/1:4,8:12:15.03:182,15,0	0/0:10,0:12:33.08:0,33,573	0/0:12,0:12:33.11:0,33,599	1/1:2,4:7:7.37:107,7,0	1/1:1,8:9:18.05:219,18,0	0/0:9,0:10:27.03:0,27,432	1/1:3,5:6:9.01:109,9,0	0/0:10,0:10:21.03:0,21,366	0/0:12,0:11:24.07:0,24,397	0/0:15,0:15:42.13:0,42,763	1/1:3,9:13:26.91:284,27,0	1/1:0,17:17:48:546,48,0	1/1:4,8:11:18:219,18,0	0/1:1,6:8:19.80:198,0,20	1/1:3,5:7:5.98:73,6,0	1/1:1,10:11:20.98:236,21,0	0/0:6,0:5:12.88:0,13,177	0/0:7,0:8:18.03:0,18,281	1/1:3,15:18:35.85:437,36,0	0/0:7,0:9:23.97:0,24,336
chr10	50002769	.	GGGGGGGGGA	G	845.84	PASS	AB=1.000;AC=14;AF=0.292;AN=48;BaseQRankSum=0.591;DP=209;FS=16.887;HRun=0;HaplotypeScore=57.0813;InbreedingCoeff=0.5087;MQ=90.04;MQ0=9;MQRankSum=-3.315;QD=15.10;ReadPosRankSum=-0.070;VQSLOD=0.4684;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:7,2:9:13.52:206,14,0	1/1:3,0:3:5.97:46,6,0	0/0:52,0:27:71.67:0,72,1203	0/0:27,0:9:21.94:0,22,542	0/0:9,0:9:6.48:0,6,94	1/1:2,0:2:0.47:1,0,0	0/1:9,0:9:3.63:4,0,173	./.	0/0:7,0:7:12.03:0,12,193	0/0:3,0:3:0:0,0,0	0/0:2,0:2:3.01:0,3,33	0/0:6,0:6:15.04:0,15,206	0/0:5,0:5:6.02:0,6,93	0/0:3,0:3:3.48:0,3,80	1/1:9,0:9:13.54:93,14,0	1/1:1,14:15:25.64:616,26,0	0/0:7,0:7:11.97:0,12,299	0/0:10,0:10:20.81:0,21,665	0/0:5,0:5:3.01:0,3,66	0/0:4,0:4:3.90:0,4,43	0/0:2,0:2:0:0,0,0	./.	1/1:2,0:2:2.96:19,3,0	./.	0/0:4,0:4:3.48:0,3,48	./.	0/1:7,0:7:1.71:2,0,374	0/0:4,0:4:6.02:0,6,195
chr10	50002894	.	T	TCTTCGTCTTACGGTGCTGTATGCTA	61140.97	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=6.795;DP=521;FS=2.335;HRun=0;HaplotypeScore=312.6892;InbreedingCoeff=0.9777;MQ=80.52;MQ0=0;MQRankSum=-16.851;QD=184.16;ReadPosRankSum=2.533;VQSLOD=4.5131;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:18,2:24:39.13:4024,39,0	1/1:5,4:10:27.09:2906,27,0	0/0:24,0:24:60.20:0,60,2854	0/0:22,0:22:50.21:0,50,2294	0/0:12,0:12:36.11:0,36,1667	1/1:16,5:23:51.18:5298,51,0	1/1:21,0:21:48.16:4232,48,0	1/1:27,0:27:69.23:3830,69,0	1/1:19,0:19:51.13:2782,51,0	0/0:22,0:22:60.19:0,60,3401	0/0:18,0:18:51.16:0,51,2897	1/1:13,2:17:42.14:4265,42,0	1/1:14,6:24:47.91:4243,48,0	0/0:13,0:13:39.12:0,39,2152	1/1:28,8:37:87.30:7563,87,0	1/1:15,4:22:47.91:4039,48,0	0/0:24,0:24:66.23:0,66,3877	0/0:18,0:18:48.12:0,48,2986	1/1:18,1:20:42.10:2699,42,0	1/1:16,2:18:51.18:3564,51,0	1/1:8,1:10:15.05:1363,15,0	1/1:17,0:17:42.14:3381,42,0	1/1:12,1:14:30.10:2390,30,0	1/1:7,1:10:12.04:1169,12,0	0/0:9,0:9:24.08:0,24,1510	0/0:25,0:25:72.24:0,72,4311	1/1:13,3:18:45.15:3393,45,0	0/0:2,0:2:6.02:0,6,365
chr10	50005237	.	AG	A	16724.58	PASS	AB=0.526;AC=33;AF=0.589;AN=56;BaseQRankSum=19.585;DP=729;FS=3.224;HRun=2;HaplotypeScore=114.0169;InbreedingCoeff=0.9268;MQ=71.28;MQ0=0;MQRankSum=-6.228;QD=35.81;ReadPosRankSum=2.046;VQSLOD=4.7357;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,44:44:99:1557,120,0	0/1:1,9:10:14.87:320,0,15	0/0:21,0:21:48.17:0,48,790	0/0:27,0:27:69.23:0,69,1028	0/0:26,0:26:75.25:0,75,1124	1/1:3,34:37:99:1374,108,0	1/1:0,26:26:66.21:856,66,0	1/1:1,29:30:81.21:1018,81,0	1/1:1,20:21:57.19:739,57,0	0/0:36,0:36:99:0,102,1505	0/0:25,0:25:75.22:0,75,1100	1/1:0,31:31:93.26:1187,93,0	1/1:0,37:37:96.31:1244,96,0	0/0:18,1:19:18.25:0,18,757	1/1:0,46:46:99:1673,129,0	1/1:0,27:27:81.26:1051,81,0	0/0:23,0:23:69.22:0,69,1013	0/0:22,0:22:66.22:0,66,989	1/1:0,22:22:66.19:830,66,0	1/1:0,26:27:78.08:945,78,0	1/1:0,24:24:66.21:856,66,0	1/1:0,19:19:57.19:740,57,0	1/1:0,22:22:66.21:854,66,0	1/1:0,21:21:51.17:662,51,0	0/0:24,0:24:69.23:0,69,1032	0/0:32,0:32:93.30:0,93,1373	1/1:0,23:23:63.20:818,63,0	0/0:7,0:7:21.07:0,21,310
chr10	50005336	.	AC	A	5729.08	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=9.504;DP=630;FS=3.121;HRun=2;HaplotypeScore=102.6784;InbreedingCoeff=0.9281;MQ=85.96;MQ0=0;MQRankSum=-14.157;QD=18.25;ReadPosRankSum=-0.591;VQSLOD=4.7454;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,17:22:36.09:450,36,0	1/1:0,9:9:18.06:233,18,0	0/0:34,0:33:77:0,77,1383	0/0:31,1:33:26.24:0,26,920	0/0:32,0:32:90.30:0,90,1336	1/1:0,20:20:42.14:544,42,0	1/1:4,11:15:5.99:62,6,0	1/1:3,22:25:69.22:884,69,0	1/1:0,15:15:12.04:155,12,0	0/0:37,0:37:99:0,111,1662	0/0:26,0:26:69.23:0,69,1032	1/1:0,16:16:18.06:233,18,0	1/1:1,19:20:24.01:275,24,0	0/0:21,0:21:63.21:0,63,933	1/1:3,17:20:27.09:350,27,0	1/1:0,22:22:51.17:661,51,0	0/0:32,0:32:96.33:0,96,1439	0/0:21,0:21:63.18:0,63,920	1/1:2,22:24:69.19:872,69,0	1/1:1,19:20:9.90:101,10,0	1/1:1,12:13:5.97:78,6,0	1/1:2,22:24:18.48:234,18,0	1/1:3,14:17:14.73:167,15,0	1/1:1,5:6:3.01:39,3,0	0/0:18,0:18:51.16:0,51,741	0/0:40,0:40:99:0,120,1742	1/1:0,26:26:30.10:389,30,0	0/0:22,0:22:66.22:0,66,984
chr10	50005667	.	TTC	T	225.51	PASS	AB=0.963;AC=14;AF=0.292;AN=48;BaseQRankSum=1.116;DP=624;FS=13.409;HRun=0;HaplotypeScore=92.9607;InbreedingCoeff=0.3956;MQ=68.72;MQ0=6;MQRankSum=-0.074;QD=1.18;ReadPosRankSum=0.801;VQSLOD=0.9409;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:22:7.06:36,7,0	0/0:12,0:12:2.97:0,3,20	./.	./.	0/1:27,2:29:48.77:49,0,58	0/0:21,0:27:5.60:0,6,36	0/0:27,0:26:5.95:0,6,63	0/0:41,0:39:2.13:0,2,5	0/0:19,0:19:11.98:0,12,98	0/1:23,1:25:24.62:25,0,25	./.	0/0:24,0:24:16.64:0,17,180	0/0:29,0:29:28.58:0,29,227	0/0:19,0:24:3.47:0,3,27	0/0:24,0:24:16.79:0,17,183	1/1:20,4:24:6.01:64,6,0	1/1:10,1:13:11.70:92,12,0	1/1:6,4:12:9.20:88,9,0	0/0:10,0:10:5.98:0,6,50	0/1:18,0:18:0.26:0,0,0	0/0:19,0:21:3:0,3,26	./.	0/0:23,0:23:9:0,9,88	0/0:28,0:29:24.34:0,24,197	0/0:19,0:19:6:0,6,50	1/1:26,0:26:1.13:11,1,0	0/0:22,0:27:21:0,21,204	0/1:20,0:21:3.26:3,0,81
chr10	50006478	.	GA	G	10369.82	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=14.706;DP=867;FS=3.371;HRun=4;HaplotypeScore=95.3033;InbreedingCoeff=1.0000;MQ=85.28;MQ0=0;MQRankSum=-1.597;QD=31.23;ReadPosRankSum=-0.335;VQSLOD=4.7065;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,67:70:99:1979,166,0	1/1:0,14:14:39.12:468,39,0	0/0:27,0:27:78.26:0,78,1091	0/0:30,0:30:84.23:0,84,1107	0/0:28,0:28:72.15:0,72,911	0/0:23,0:23:69.19:0,69,914	0/0:30,0:30:84.25:0,84,1138	1/1:1,46:47:99:1592,135,0	0/0:26,0:26:72.23:0,72,992	0/0:40,0:40:99:0,105,1396	0/0:33,0:33:93.26:0,93,1250	0/0:31,0:31:93.31:0,93,1302	0/0:29,0:29:84.26:0,84,1158	0/0:21,0:21:60.20:0,60,840	1/1:1,39:40:99:1296,108,0	1/1:0,36:36:99:1224,102,0	0/0:43,0:43:99:0,126,1764	0/0:36,0:36:93.25:0,93,1257	1/1:3,26:29:75.23:896,75,0	1/1:1,28:29:60.18:719,60,0	1/1:1,36:37:99:1224,102,0	0/0:26,0:26:72.22:0,72,967	0/0:23,0:23:54.16:0,54,719	0/0:27,0:27:81.25:0,81,1102	0/0:20,0:20:51.17:0,51,701	0/0:27,0:27:81.26:0,81,1118	1/1:0,30:30:81.14:971,81,0	0/0:15,0:15:45.15:0,45,630
chr10	50007161	.	T	TGG	12080.95	PASS	AB=0.667;AC=53;AF=0.946;AN=56;BaseQRankSum=-1.030;DP=342;FS=25.024;HRun=0;HaplotypeScore=45.0370;InbreedingCoeff=0.3859;MQ=36.47;MQ0=56;MQRankSum=-2.737;QD=36.39;ReadPosRankSum=2.608;VQSLOD=3.8966;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,13:14:36.12:645,36,0	1/1:1,7:8:24.08:428,24,0	1/1:8,0:1:3:25,3,0	0/0:10,0:3:5.05:0,5,54	1/1:2,7:9:24.08:387,24,0	1/1:3,10:12:24.08:450,24,0	1/1:3,4:5:12.04:220,12,0	1/1:9,11:14:42.12:699,42,0	1/1:3,8:8:18.06:332,18,0	1/1:3,16:18:48.16:878,48,0	1/1:0,9:10:21.07:367,21,0	1/1:3,9:10:27.09:463,27,0	1/1:1,11:11:27.09:429,27,0	1/1:3,10:12:24.08:402,24,0	1/1:6,14:16:39.13:682,39,0	1/1:2,9:9:21.07:390,21,0	1/1:8,4:5:15.05:260,15,0	1/1:4,6:8:21.07:370,21,0	1/1:8,4:8:17.58:272,18,0	1/1:0,15:15:39.13:697,39,0	1/1:0,5:5:6.02:113,6,0	1/1:0,8:8:18.06:323,18,0	1/1:0,12:12:30.10:535,30,0	1/1:3,5:5:9.03:169,9,0	1/1:0,20:20:54.18:965,54,0	1/1:4,12:15:42.14:737,42,0	1/1:3,12:14:39.13:684,39,0	0/1:2,2:4:36.91:158,0,37
chr10	50007639	.	TAAA	T	7132.84	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=11.968;DP=565;FS=0.000;HRun=10;HaplotypeScore=86.2386;InbreedingCoeff=0.9823;MQ=72.78;MQ0=1;MQRankSum=-4.949;QD=29.97;ReadPosRankSum=2.971;VQSLOD=4.0231;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,32:41:80.96:1072,81,0	1/1:2,7:9:15.04:205,15,0	0/0:19,0:19:20.68:0,21,504	0/0:4,0:4:9.03:0,9,147	0/0:32,0:35:93.21:0,93,1680	0/0:17,0:17:42.14:0,42,871	0/0:9,0:11:30.07:0,30,529	1/1:2,25:27:75.18:971,75,0	0/0:12,0:12:30.09:0,30,572	0/0:22,0:22:63.21:0,63,1274	0/0:32,0:33:96.30:0,96,1909	0/0:14,0:15:45.08:0,45,806	0/0:16,0:17:42.12:0,42,832	0/0:23,0:23:69.23:0,69,1362	1/1:2,30:32:78.25:1064,78,0	1/1:4,12:16:36.11:491,36,0	0/0:21,0:21:57.20:0,57,1182	0/0:13,0:14:42.11:0,42,767	1/1:3,16:19:48.14:638,48,0	1/1:3,37:40:99:1324,102,0	1/1:6,11:17:24.06:328,24,0	0/0:13,0:13:36.12:0,36,715	0/0:13,0:13:30.09:0,30,584	0/0:12,0:15:39.11:0,39,770	0/0:12,0:12:30.10:0,30,588	0/0:24,0:24:63.22:0,63,1307	1/1:3,34:37:78.17:1040,78,0	0/0:5,0:5:12.04:0,12,208
chr10	50008312	.	TGAGCCACTGGGTGTTGA	T	9262.79	PASS	AB=0.704;AC=9;AF=0.161;AN=56;BaseQRankSum=12.795;DP=660;FS=18.631;HRun=0;HaplotypeScore=305.3931;InbreedingCoeff=-0.1915;MQ=75.35;MQ0=0;MQRankSum=-10.936;QD=39.58;ReadPosRankSum=2.472;VQSLOD=2.7722;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:21,10:31:99:692,0,1583	0/1:4,12:16:99:1282,0,846	0/0:20,0:20:51.17:0,51,2545	0/0:23,0:23:66.23:0,66,3829	0/0:23,0:23:57.18:0,57,4109	0/0:29,0:29:81.28:0,81,6433	0/0:19,0:19:54.19:0,54,4099	0/1:14,10:24:99:964,0,1417	0/0:19,0:19:57.20:0,57,3897	0/0:29,0:29:81.26:0,81,5391	0/0:14,0:14:42.14:0,42,3358	0/0:20,0:20:60.20:0,60,3887	0/0:26,0:26:72.25:0,72,5500	0/0:31,0:31:90.31:0,90,6734	0/1:21,13:34:99:967,0,2403	0/1:20,11:31:99:970,0,2611	0/0:41,0:41:99:0,123,9362	0/0:18,0:18:48.16:0,48,3047	0/1:13,4:16:99:293,0,1586	0/1:11,25:36:99:2411,0,2183	0/1:13,5:18:99:128,0,759	0/0:18,0:18:51.18:0,51,3483	0/0:13,0:13:33.11:0,33,2518	0/0:20,0:20:57.20:0,57,4431	0/0:19,0:19:54.18:0,54,3549	0/0:32,0:32:96.33:0,96,6846	0/1:13,14:27:99:1555,0,1892	0/0:12,0:12:30.10:0,30,2482
chr10	50008970	.	A	ACCG	17897.07	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-14.716;DP=706;FS=12.094;HRun=0;HaplotypeScore=97.3774;InbreedingCoeff=0.9925;MQ=86.81;MQ0=0;MQRankSum=-5.816;QD=39.25;ReadPosRankSum=2.014;VQSLOD=5.4051;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,42:48:87.30:1904,87,0	1/1:1,16:17:33.11:700,33,0	0/0:27,0:27:63.15:0,63,947	0/0:21,0:21:35.75:0,36,736	0/0:27,0:27:81.25:0,81,1271	1/1:1,18:21:12.04:233,12,0	1/1:0,25:26:57.20:1255,57,0	1/1:3,21:26:65.84:1074,66,0	1/1:2,17:23:33.11:701,33,0	0/0:29,0:29:69.21:0,69,1077	0/0:11,0:11:24.07:0,24,366	1/1:3,28:32:72.25:1601,72,0	1/1:3,21:25:51.18:1130,51,0	0/0:20,0:20:48.16:0,48,765	1/1:3,26:29:63.22:1401,63,0	1/1:3,25:28:69.24:1538,69,0	0/0:38,0:38:99:0,105,1673	0/0:26,0:26:75.26:0,75,1213	1/1:4,10:15:32.96:505,33,0	1/1:3,16:21:38.85:729,39,0	1/1:3,33:36:57.19:1231,57,0	1/1:5,13:18:15.05:334,15,0	1/1:4,20:24:29.94:627,30,0	1/1:2,36:38:74.19:1669,74,0	0/0:19,0:19:48.13:0,48,734	0/0:22,0:22:60.15:0,60,927	1/1:2,26:29:56.73:1266,57,0	0/0:10,0:10:24.08:0,24,392
chr10	50010198	.	CGTGAT	C	1973.91	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.346;DP=752;FS=0.000;HRun=0;HaplotypeScore=132.5245;InbreedingCoeff=0.9958;MQ=86.32;MQ0=0;MQRankSum=-2.834;QD=48.14;ReadPosRankSum=1.804;VQSLOD=3.9475;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,117,3835	1/1:0,7:7:18.06:419,18,0	0/0:32,0:32:93.32:0,93,2977	0/0:18,0:18:51.17:0,51,1610	0/0:39,0:39:99:0,117,3882	0/0:19,0:19:57.18:0,57,1821	0/0:26,0:26:78.23:0,78,2485	0/0:27,0:27:81.19:0,81,2523	0/0:28,0:28:81.28:0,81,2659	0/0:28,0:28:84.28:0,84,2660	0/0:27,0:27:81.28:0,81,2696	0/0:25,0:25:75.26:0,75,2489	0/0:25,0:25:75.26:0,75,2466	0/0:26,0:26:75.26:0,75,2432	1/1:0,34:34:72.25:1675,72,0	0/0:23,0:23:69.24:0,69,2246	0/0:49,0:49:99:0,148,4725	0/0:23,0:23:69.24:0,69,2261	0/0:18,0:18:54.18:0,54,1727	0/0:30,0:30:87.26:0,87,2670	0/0:41,0:41:99:0,123,4006	0/0:21,0:21:63.20:0,63,1992	0/0:22,0:22:66.23:0,66,2182	0/0:33,0:33:96.33:0,96,3192	0/0:23,0:23:69.24:0,69,2282	0/0:31,0:31:90.31:0,90,2936	0/0:24,0:24:72.25:0,72,2310	0/0:14,0:14:42.14:0,42,1329
chr10	50011000	.	G	GT	11941.99	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-7.178;DP=625;FS=0.329;HRun=7;HaplotypeScore=64.8928;InbreedingCoeff=0.9933;MQ=81.68;MQ0=1;MQRankSum=-2.776;QD=30.16;ReadPosRankSum=3.138;VQSLOD=5.1310;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,39:41:99:1304,108,0	1/1:0,7:7:18.06:217,18,0	0/0:33,0:33:63.53:0,64,595	0/0:27,0:27:65.58:0,66,615	0/0:15,0:15:39.06:0,39,376	1/1:2,16:18:42.13:507,42,0	1/1:1,33:34:87.27:1051,87,0	1/1:5,19:24:57.13:661,57,0	1/1:2,21:23:57.17:689,57,0	0/0:21,0:21:54.08:0,54,521	0/0:9,0:9:12:0,12,116	1/1:4,15:19:42.13:507,42,0	1/1:4,18:23:22.19:547,22,0	0/0:25,0:25:66.10:0,66,637	1/1:2,25:27:63.19:761,63,0	1/1:1,25:26:69.21:833,69,0	0/0:27,0:27:66.09:0,66,631	0/0:20,0:20:54.09:0,54,521	1/1:2,15:17:48.01:556,48,0	1/1:1,15:16:45.14:544,45,0	1/1:2,30:33:81.25:976,81,0	1/1:0,12:12:30.09:362,30,0	1/1:0,19:19:54.17:652,54,0	1/1:2,28:30:84.26:1015,84,0	0/0:25,0:25:66.06:0,66,620	0/0:20,0:20:51.08:0,51,492	1/1:2,24:25:63.19:759,63,0	0/0:7,0:7:21:0,21,194
chr10	50011750	.	CGTGCGTGCGTGTTTGTGTGTGTGT	C	7317.63	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=4.406;DP=565;FS=4.872;HRun=0;HaplotypeScore=279.6784;InbreedingCoeff=0.6443;MQ=63.67;MQ0=12;MQRankSum=-4.470;QD=23.38;ReadPosRankSum=-0.005;VQSLOD=3.3532;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:30:99:325,0,218	1/1:1,0:5:6.02:152,6,0	0/0:31,0:21:54.62:0,55,1156	0/0:26,0:15:31.64:0,32,506	0/0:20,0:20:44.33:0,44,1793	1/1:4,19:23:3.01:196,3,0	1/1:14,0:14:32.92:588,33,0	1/1:16,0:16:12.96:633,13,0	1/1:2,18:20:11.11:661,11,0	0/0:24,0:24:66.22:0,66,3047	0/0:13,0:13:36.12:0,36,1707	1/1:2,31:33:8.91:574,9,0	1/1:1,23:23:14.94:766,15,0	0/0:18,0:18:48.16:0,48,3311	1/1:2,0:21:5.82:233,6,0	0/1:15,0:15:99:158,0,390	0/0:27,0:27:66.19:0,66,4390	0/0:30,0:30:84.23:0,84,4237	1/1:19,0:19:6.43:619,6,0	0/0:2,0:14:2.98:0,3,22	1/1:29,0:28:43.21:854,43,0	1/1:0,13:14:5.47:272,5,0	1/1:2,14:17:6.02:272,6,0	1/1:17,2:21:26.91:820,27,0	0/0:24,0:24:64.07:0,64,3573	0/0:19,0:19:54.14:0,54,2497	0/1:12,0:12:83.39:193,0,83	0/0:5,0:5:15.05:0,15,894
chr10	50011753	.	GCGTGCGTGTT	G	7376.73	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=3.214;DP=554;FS=11.071;HRun=0;HaplotypeScore=160.7141;InbreedingCoeff=0.8721;MQ=59.49;MQ0=14;MQRankSum=-0.919;QD=23.42;ReadPosRankSum=1.314;VQSLOD=3.6950;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:34,0:33:48.04:936,48,0	1/1:4,0:4:6.02:131,6,0	0/0:30,0:20:46.45:0,46,1145	0/0:22,0:12:31.64:0,32,506	0/0:21,0:21:46.77:0,47,1043	1/1:19,0:19:3.01:79,3,0	1/1:13,0:13:33.09:632,33,0	1/1:0,15:15:45.11:743,45,0	1/1:18,0:18:11.96:202,12,0	0/0:24,0:24:69.11:0,69,1575	0/0:13,0:13:33.04:0,33,916	1/1:32,0:32:8.81:223,9,0	1/1:24,0:23:15.05:313,15,0	0/0:18,0:18:50.38:0,50,1603	1/1:19,0:19:5.60:158,6,0	1/1:14,0:14:36.09:768,36,0	0/0:29,0:28:69.16:0,69,2258	0/0:33,0:33:93.22:0,93,2486	1/1:0,17:17:44.44:674,44,0	1/1:14,0:13:3.01:80,3,0	1/1:27,0:26:48.15:1091,48,0	1/1:15,0:14:5.60:96,6,0	1/1:15,0:15:5.81:57,6,0	1/1:23,0:23:27.09:626,27,0	0/0:24,0:24:65.22:0,65,2027	0/0:19,0:19:57.15:0,57,1457	1/1:12,0:12:33.03:566,33,0	0/0:5,0:5:15.05:0,15,446
chr10	50012635	.	A	AT	9467.69	PASS	AB=1.000;AC=35;AF=0.625;AN=56;BaseQRankSum=-6.164;DP=491;FS=9.039;HRun=2;HaplotypeScore=57.0215;InbreedingCoeff=0.9345;MQ=81.21;MQ0=0;MQRankSum=-1.479;QD=32.87;ReadPosRankSum=0.388;VQSLOD=4.1934;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:16:47.97:409,48,0	1/1:10,0:10:26.29:207,26,0	0/0:19,0:19:32.14:0,32,377	0/1:14,0:14:6.61:7,0,183	0/0:31,0:31:90.26:0,90,1081	1/1:0,16:16:48.16:689,48,0	1/1:0,8:8:21.07:301,21,0	1/1:1,21:22:63.13:797,63,0	1/1:0,14:14:36.12:516,36,0	0/0:21,0:21:60.18:0,60,726	0/0:21,0:21:60.19:0,60,742	1/1:1,14:15:39.12:538,39,0	1/1:0,17:17:42.14:603,42,0	0/0:15,0:15:45.13:0,45,545	1/1:23,0:23:68.48:593,68,0	1/1:18,0:18:44.99:390,45,0	0/0:23,0:23:66.14:0,66,774	0/0:17,0:16:51.03:0,51,579	1/1:1,18:19:57.16:767,57,0	1/1:2,15:17:51.14:695,51,0	1/1:2,5:7:15.05:216,15,0	1/1:0,17:17:51.17:733,51,0	1/1:1,17:18:48.14:670,48,0	1/1:0,13:13:36.12:516,36,0	0/0:15,0:15:42.08:0,42,464	0/0:27,0:27:78.23:0,78,945	1/1:1,23:24:57.06:819,57,0	0/0:14,0:14:39:0,39,451
chr10	50012637	.	T	TTA	6615.50	PASS	AB=1.000;AC=33;AF=0.589;AN=56;BaseQRankSum=7.148;DP=495;FS=7.451;HRun=0;HaplotypeScore=77.0641;InbreedingCoeff=0.9364;MQ=78.55;MQ0=0;MQRankSum=-1.652;QD=23.54;ReadPosRankSum=1.179;VQSLOD=5.0588;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,16:18:51.18:1022,51,0	1/1:1,9:11:27.01:476,27,0	0/0:18,0:18:32.63:0,33,478	0/0:13,0:13:17.94:0,18,256	0/0:31,0:31:93.27:0,93,1429	1/1:16,0:16:46.39:250,46,0	1/1:8,0:8:20.29:109,20,0	1/1:24,0:24:20.47:374,20,0	1/1:15,0:14:34.78:187,35,0	0/0:21,0:21:60.18:0,60,933	0/0:21,0:21:63.19:0,63,995	1/1:15,0:15:36.13:213,36,0	1/1:17,0:17:40.58:218,41,0	0/0:15,0:15:45.14:0,45,703	1/1:4,19:23:69.21:1276,69,0	1/1:0,17:18:45.15:909,45,0	0/0:23,0:23:66.15:0,66,986	0/0:17,0:17:48.12:0,48,724	1/1:19,0:19:46.22:277,46,0	1/1:17,0:17:46.95:260,47,0	0/1:7,0:7:6.65:61,0,7	1/1:17,0:17:49.34:267,49,0	1/1:18,0:18:40.60:231,41,0	1/1:13,0:13:34.75:187,35,0	0/0:15,0:15:45.09:0,45,611	0/0:26,0:26:78.25:0,78,1220	1/1:25,0:25:55.01:297,55,0	0/0:13,0:13:39.13:0,39,615
chr10	50012724	.	TG	T	5910.12	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=9.572;DP=448;FS=10.304;HRun=6;HaplotypeScore=96.9759;InbreedingCoeff=0.9947;MQ=73.79;MQ0=9;MQRankSum=-6.652;QD=25.04;ReadPosRankSum=1.998;VQSLOD=4.2365;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,8:13:26.89:245,27,0	1/1:2,5:7:15.04:160,15,0	0/0:28,0:15:30.06:0,30,344	0/0:24,0:17:36.92:0,37,417	0/0:24,0:23:54.17:0,54,697	1/1:2,13:14:33.07:344,33,0	1/1:3,11:13:30.07:318,30,0	1/1:0,6:6:18.05:193,18,0	1/1:2,11:12:30.06:302,30,0	0/0:14,0:14:36.03:0,36,432	0/0:19,0:19:37.06:0,37,471	1/1:1,11:11:33.07:337,33,0	1/1:4,16:20:48.10:493,48,0	0/0:13,0:13:24.34:0,24,324	1/1:4,11:15:39.02:389,39,0	1/1:4,8:12:27.03:278,27,0	0/0:22,0:21:53.64:0,54,602	0/0:20,0:20:49.93:0,50,584	1/1:4,10:14:39.09:412,39,0	1/1:4,11:14:35.97:368,36,0	1/1:3,10:12:21:210,21,0	1/1:1,12:13:33.07:340,33,0	1/1:0,25:25:75.16:775,75,0	1/1:0,10:8:24.05:251,24,0	0/0:18,0:18:45.13:0,45,573	0/0:17,0:16:39.03:0,39,469	1/1:4,15:19:48.53:494,49,0	0/0:13,0:13:38.99:0,39,481
chr10	50012731	.	AGTGTGTGTGTGTGTGT	A	6247	PASS	AC=16;AF=0.296;AN=54;BaseQRankSum=7.416;DP=454;FS=1.167;HRun=0;HaplotypeScore=219.7138;InbreedingCoeff=0.8944;MQ=65.68;MQ0=15;MQRankSum=-8.517;QD=55.28;ReadPosRankSum=3.783;VQSLOD=4.3281;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:12:24.06:0,24,624	0/0:7,0:7:12.04:0,12,750	./.	0/0:21,0:14:2.50:0,2,9	0/0:27,0:26:45.27:0,45,2881	1/1:9,3:12:20.94:560,21,0	1/1:9,2:11:12.02:309,12,0	0/0:7,0:6:9:0,9,137	1/1:4,6:10:21.07:885,21,0	0/0:22,0:19:42.13:0,42,1883	0/0:23,0:24:24.55:0,25,1428	1/1:5,7:11:21.07:907,21,0	1/1:9,6:16:1.19:990,1,0	0/0:11,0:14:27.09:0,27,1516	0/0:15,0:16:30.10:0,30,1725	0/0:9,0:11:24.08:0,24,934	0/0:23,0:23:39.06:0,39,2420	0/0:22,0:21:45.15:0,45,2422	0/0:12,0:12:11.52:0,12,284	0/0:14,0:14:27.09:0,27,925	0/0:11,0:12:15.05:0,15,577	1/1:6,6:12:24.02:817,24,0	1/1:15,8:25:44.98:1394,45,0	1/1:8,3:8:12:386,12,0	0/0:18,0:18:36.12:0,36,2172	0/0:15,0:16:24.05:0,24,1121	0/0:15,0:19:42.01:0,42,1257	0/0:17,0:17:30.10:0,30,1374
chr10	50012782	.	A	AT	3609.36	PASS	AB=0.677;AC=16;AF=0.286;AN=56;BaseQRankSum=-7.340;DP=480;FS=14.795;HRun=9;HaplotypeScore=104.6919;InbreedingCoeff=0.8455;MQ=54.63;MQ0=10;MQRankSum=3.175;QD=24.55;ReadPosRankSum=-2.526;VQSLOD=1.9906;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:10,10:20:4.05:386,0,4	1/1:3,5:8:21.06:232,21,0	0/0:26,0:7:8.30:0,8,76	0/0:19,0:5:13.53:0,14,84	0/0:23,0:23:53.93:0,54,465	0/0:16,0:15:41.91:0,42,351	0/0:19,0:19:50.19:0,50,419	1/1:3,15:18:45.08:484,45,0	0/0:20,0:19:52.80:0,53,444	0/0:16,0:16:44.99:0,45,391	0/0:12,0:12:28.83:0,29,235	0/0:11,0:11:32.99:0,33,284	0/0:17,0:18:44.46:0,44,369	0/0:16,0:16:25.86:0,26,230	1/1:4,18:22:57.15:629,57,0	1/1:3,11:14:36.18:364,36,0	0/0:23,0:20:42.23:0,42,351	0/0:18,0:18:53.97:0,54,465	1/1:5,10:14:36.10:397,36,0	1/1:3,17:21:54.45:580,54,0	0/1:6,5:9:8:148,0,8	0/0:17,1:18:14.77:0,15,351	0/0:23,0:23:32.52:0,33,444	0/0:19,0:17:41.86:0,42,357	0/0:15,0:15:41.99:0,42,364	0/0:13,0:13:38.99:0,39,339	1/1:5,13:18:31.06:390,31,0	0/0:8,0:8:20.99:0,21,182
chr10	50013820	.	TGGG	T	1083.97	PASS	AB=0.667;AC=7;AF=0.125;AN=56;BaseQRankSum=0.381;DP=468;FS=3.330;HRun=12;HaplotypeScore=76.3056;InbreedingCoeff=0.7720;MQ=69.12;MQ0=21;MQRankSum=-0.325;QD=18.37;ReadPosRankSum=4.757;VQSLOD=2.2875;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:12,13:25:37.75:458,38,0	0/1:5,5:8:47.01:102,0,47	0/0:57,0:14:18.03:0,18,231	0/0:39,0:10:11.24:0,11,120	0/0:6,0:8:20.20:0,20,308	0/0:12,0:12:18.02:0,18,278	0/0:8,0:9:21.05:0,21,338	0/0:15,0:15:29.57:0,30,345	0/0:8,0:8:21.07:0,21,360	0/0:15,0:14:22.87:0,23,370	0/0:9,0:10:12.04:0,12,209	0/0:12,0:12:30.10:0,30,535	0/0:10,0:10:21.06:0,21,343	0/0:13,0:13:21.07:0,21,362	1/1:3,8:11:24.07:302,24,0	1/1:1,12:13:30.09:371,30,0	0/0:40,0:42:85.36:0,85,1381	0/0:21,0:21:39.13:0,39,729	0/0:10,0:11:18.11:0,18,277	0/0:16,0:16:29.86:0,30,357	0/0:16,0:17:37.66:0,38,457	0/0:8,0:9:22.28:0,22,289	0/0:13,0:14:14.98:0,15,270	0/0:18,0:18:36.02:0,36,581	0/0:11,0:11:21.07:0,21,341	0/0:22,0:22:60.15:0,60,993	0/0:13,0:13:29.90:0,30,345	0/0:6,0:3:6.02:0,6,116
chr10	50014097	.	G	GT	2470.28	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=12.050;DP=613;FS=1.005;HRun=1;HaplotypeScore=103.7977;InbreedingCoeff=0.9840;MQ=88.97;MQ0=0;MQRankSum=-10.293;QD=30.50;ReadPosRankSum=-2.260;VQSLOD=2.8882;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,147,1909	0/0:6,0:6:18.06:0,18,234	0/0:19,0:19:57.18:0,57,730	0/0:29,0:29:75.21:0,75,930	0/0:12,0:12:30.08:0,30,375	0/0:11,0:11:33.09:0,33,412	0/0:20,0:20:48.16:0,48,623	1/1:10,11:21:63.20:874,63,0	0/0:30,0:30:78.25:0,78,1013	0/0:20,0:20:51.16:0,51,651	0/0:14,0:14:39.09:0,39,476	0/0:40,0:40:99:0,105,1349	0/0:25,0:25:75.24:0,75,974	0/0:24,0:24:69.21:0,69,881	0/0:31,0:31:87.26:0,87,1113	0/0:30,0:30:87.25:0,87,1100	0/0:31,0:31:87.26:0,87,1114	0/0:21,0:21:63.20:0,63,817	1/1:8,10:18:54.17:714,54,0	1/1:1,7:8:24.02:277,24,0	1/1:6,9:15:33.04:350,33,0	0/0:12,0:12:36.12:0,36,466	0/0:22,0:22:57.18:0,57,740	0/0:36,0:36:99:0,108,1385	0/0:23,0:23:69.21:0,69,882	0/0:23,0:23:66.20:0,66,844	1/1:4,15:19:39.05:430,39,0	0/0:3,0:3:9.03:0,9,117
chr10	50014100	.	ACGGG	A	1313.78	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=10.662;DP=571;FS=3.791;HRun=0;HaplotypeScore=126.6659;InbreedingCoeff=0.9792;MQ=91.20;MQ0=0;MQRankSum=-8.208;QD=26.81;ReadPosRankSum=0.104;VQSLOD=3.4805;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,163,4475	0/0:7,0:7:21.07:0,21,548	0/0:21,0:21:63.19:0,63,1723	0/0:26,0:26:78.20:0,78,1985	0/0:10,0:10:30.10:0,30,855	0/0:11,0:11:33.10:0,33,892	0/0:19,0:19:57.20:0,57,1650	1/1:2,7:9:26.75:323,27,0	0/0:28,0:28:84.29:0,84,2376	0/0:20,0:20:57.18:0,57,1528	0/0:13,0:13:36.12:0,36,1013	0/0:36,0:36:99:0,108,3062	0/0:25,0:25:75.26:0,75,2131	0/0:23,0:23:69.22:0,69,1931	0/0:30,0:30:90.29:0,90,2512	0/0:31,0:31:90.27:0,90,2480	0/0:29,0:29:87.30:0,87,2478	0/0:21,0:21:63.22:0,63,1802	1/1:2,8:10:30.10:413,30,0	1/1:3,4:7:18.04:211,18,0	1/1:2,7:9:14.91:149,15,0	0/0:12,0:12:30.10:0,30,867	0/0:20,0:20:60.17:0,60,1602	0/0:36,0:36:99:0,108,3106	0/0:23,0:23:69.24:0,69,1997	0/0:23,0:23:66.19:0,66,1646	1/1:4,10:14:36.08:391,36,0	0/0:3,0:3:9.03:0,9,261
chr10	50014105	.	TAGTGGCTC	T	1902.80	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=9.865;DP=558;FS=3.188;HRun=0;HaplotypeScore=170.0334;InbreedingCoeff=0.9697;MQ=88.69;MQ0=0;MQRankSum=-9.145;QD=48.79;ReadPosRankSum=1.164;VQSLOD=3.6075;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,154,6268	0/0:7,0:7:21.07:0,21,788	0/0:19,0:19:51.11:0,51,1892	0/0:23,0:23:66.06:0,66,2096	0/0:11,0:11:33.11:0,33,1389	0/0:13,0:13:36.12:0,36,1605	0/0:23,0:23:69.24:0,69,3058	1/1:0,7:7:21.07:433,21,0	0/0:29,0:29:87.30:0,87,3594	0/0:18,0:18:45.15:0,45,1801	0/0:12,0:12:36.12:0,36,1434	0/0:36,0:36:99:0,108,4641	0/0:27,0:27:81.28:0,81,3462	0/0:22,0:22:66.23:0,66,2916	0/0:30,0:30:87.30:0,87,3797	0/0:30,0:30:84.29:0,84,3577	0/0:29,0:29:87.30:0,87,3770	0/0:21,0:21:63.22:0,63,2575	1/1:1,8:9:27.09:546,27,0	1/1:0,4:4:12.04:241,12,0	1/1:1,7:8:12.04:240,12,0	0/0:11,0:11:30.10:0,30,1148	0/0:19,0:19:48.14:0,48,1866	0/0:39,0:39:99:0,117,5169	0/0:23,0:23:66.18:0,66,2458	0/0:21,0:21:60.19:0,60,2415	1/1:1,10:11:32.47:613,32,0	0/0:3,0:3:9.03:0,9,402
chr10	50014292	.	AT	A	4611.09	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-0.064;DP=552;FS=4.710;HRun=4;HaplotypeScore=71.6583;InbreedingCoeff=0.9260;MQ=70.64;MQ0=6;MQRankSum=-1.541;QD=15.85;ReadPosRankSum=2.311;VQSLOD=4.1916;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:18:38.53:324,39,0	1/1:9,1:10:8.05:58,8,0	0/0:54,0:18:28.48:0,28,214	0/0:35,0:10:17.53:0,18,122	0/0:19,0:19:44.59:0,45,385	1/1:15,0:15:35.96:300,36,0	1/1:17,0:17:38.89:316,39,0	1/1:22,1:23:39.37:317,39,0	1/1:20,0:20:5.99:51,6,0	0/0:27,0:27:56.81:0,57,526	0/0:24,0:24:56.80:0,57,521	1/1:16,0:16:6.01:59,6,0	1/1:15,0:15:32.93:265,33,0	0/0:18,0:18:29.61:0,30,266	1/1:11,0:11:32.97:273,33,0	1/1:23,0:23:56.97:489,57,0	0/0:22,0:21:47.44:0,47,426	0/0:17,0:17:44.19:0,44,377	1/1:15,0:15:29.13:235,29,0	1/1:15,0:15:32.42:206,32,0	1/1:10,0:9:2.59:29,3,0	1/1:21,0:21:56.82:480,57,0	1/1:21,1:22:50.89:421,51,0	1/1:25,1:25:47.35:472,47,0	0/0:22,0:22:48.03:0,48,465	0/0:15,0:15:38.60:0,39,352	1/1:14,0:13:38.86:316,39,0	0/0:7,0:7:10.33:0,10,75
chr10	50014295	.	TTAAA	T	5690.41	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=2.516;DP=563;FS=17.155;HRun=0;HaplotypeScore=84.9592;InbreedingCoeff=0.9335;MQ=66.68;MQ0=6;MQRankSum=2.169;QD=20.04;ReadPosRankSum=5.054;VQSLOD=3.1350;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:18:21.46:367,21,0	1/1:1,9:10:7.98:78,8,0	0/0:57,0:16:28.53:0,29,234	0/0:34,0:7:20.58:0,21,204	0/0:19,0:19:49.77:0,50,731	1/1:12,1:14:37.43:363,37,0	1/1:10,0:15:41.86:390,42,0	1/1:4,18:23:23.14:497,23,0	1/1:1,19:21:5.03:94,5,0	0/0:29,0:29:86.99:0,87,1222	0/0:28,0:28:78.79:0,79,1147	1/1:0,16:18:8.94:103,9,0	1/1:11,0:12:35.94:322,36,0	0/0:18,0:18:50.97:0,51,776	1/1:11,0:12:34.21:295,34,0	1/1:16,3:23:58.15:567,58,0	0/0:24,0:23:57.11:0,57,916	0/0:20,0:20:56.93:0,57,854	1/1:10,0:11:29.04:253,29,0	1/1:0,16:16:39.33:275,39,0	1/1:1,7:7:2.08:55,2,0	1/1:19,0:22:45.19:496,45,0	1/1:17,3:21:55.33:517,55,0	1/1:21,6:26:50.82:620,51,0	0/0:23,0:23:66.06:0,66,1088	0/0:19,0:19:57.16:0,57,997	1/1:9,1:13:38.90:399,39,0	0/0:8,0:8:24.05:0,24,349
chr10	50016609	.	ATTGTGCATTT	A	31438.80	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=18.929;DP=691;FS=0.298;HRun=0;HaplotypeScore=229.2246;InbreedingCoeff=0.9937;MQ=83.87;MQ0=0;MQRankSum=-20.242;QD=75.76;ReadPosRankSum=4.204;VQSLOD=4.6416;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,27:31:51.18:1727,51,0	1/1:2,6:8:18.06:611,18,0	0/0:31,0:31:75.30:0,75,3851	0/0:25,0:25:72.20:0,72,3281	0/0:27,0:27:81.26:0,81,4098	1/1:3,19:22:48.16:1629,48,0	1/1:4,23:27:54.19:1829,54,0	1/1:4,26:30:78.27:2554,78,0	1/1:1,32:33:84.29:2850,84,0	0/0:42,0:42:99:0,123,6328	0/0:18,0:18:54.19:0,54,2662	1/1:1,28:29:72.25:2442,72,0	1/1:1,27:28:75.26:2545,75,0	0/0:33,0:33:96.32:0,96,4905	1/1:3,32:35:87.30:2951,87,0	1/1:1,30:31:75.26:2545,75,0	0/0:25,0:25:72.23:0,72,3446	0/0:23,0:23:69.21:0,69,3521	1/1:4,12:16:36.12:1222,36,0	1/1:0,26:26:51.18:1727,51,0	1/1:2,14:16:12.04:404,12,0	1/1:3,16:19:42.14:1420,42,0	1/1:0,23:23:54.19:1831,54,0	1/1:1,14:15:26.41:915,26,0	0/0:20,0:20:60.21:0,60,3025	0/0:25,0:25:75.26:0,75,3900	1/1:0,26:26:66.23:2240,66,0	0/0:7,0:7:21.07:0,21,1134
chr10	50020403	.	A	ACT	24736.03	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-16.685;DP=749;FS=5.932;HRun=0;HaplotypeScore=82.9606;InbreedingCoeff=0.9938;MQ=64.06;MQ0=0;MQRankSum=1.099;QD=49.67;ReadPosRankSum=3.767;VQSLOD=6.0423;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,27:29:84.29:1602,84,0	1/1:1,7:8:18.06:348,18,0	0/0:25,0:22:63.04:0,63,896	0/0:32,0:28:68.05:0,68,971	0/0:11,0:11:33.10:0,33,484	1/1:1,21:22:63.22:1217,63,0	1/1:1,21:22:66.23:1255,66,0	1/1:3,25:28:78.23:1427,78,0	1/1:1,30:31:90.31:1720,90,0	0/0:15,0:15:42.14:0,42,643	0/0:8,0:8:24.08:0,24,367	1/1:4,34:39:93.32:1797,93,0	1/1:1,26:27:78.27:1506,78,0	0/0:38,0:38:99:0,114,1719	1/1:1,42:43:99:1971,102,0	1/1:4,35:39:99:2010,105,0	0/0:31,0:31:93.29:0,93,1391	0/0:28,0:29:45.08:0,45,1199	1/1:6,17:23:60.21:1155,60,0	1/1:2,10:12:24.07:464,24,0	1/1:6,64:72:99:3303,171,0	1/1:1,18:19:45.15:869,45,0	1/1:2,18:20:48.16:927,48,0	1/1:1,31:33:84.29:1603,84,0	0/0:20,0:20:60.17:0,60,868	0/0:37,0:37:99:0,111,1690	1/1:0,28:30:81.17:1564,81,0	0/0:5,0:5:12.04:0,12,184
chr10	50022172	.	AGCTAAAAATAAG	A	2603.18	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.507;DP=596;FS=0.734;HRun=0;HaplotypeScore=219.4626;InbreedingCoeff=0.9945;MQ=76.29;MQ0=0;MQRankSum=-8.529;QD=48.21;ReadPosRankSum=1.841;VQSLOD=3.4334;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,23:29:30.02:896,30,0	0/0:11,0:11:24.07:0,24,1033	0/0:11,0:11:24.07:0,24,1002	0/0:14,0:15:20.94:0,21,676	0/0:28,0:28:69.24:0,69,4015	0/0:15,0:15:33.11:0,33,1887	0/0:16,0:16:42.14:0,42,2511	0/0:33,0:33:75.26:0,75,4044	0/0:18,0:18:51.16:0,51,2770	0/0:29,0:29:81.27:0,81,4473	0/0:21,0:21:51.18:0,51,2742	0/0:20,0:20:54.16:0,54,2854	0/0:24,0:24:60.21:0,60,3514	0/0:23,0:23:66.21:0,66,3472	0/0:22,0:22:63.22:0,63,3728	1/1:3,22:25:51.18:1829,51,0	0/0:24,0:24:57.20:0,57,3415	0/0:19,0:19:51.17:0,51,2879	0/0:20,0:20:51.18:0,51,2779	0/0:30,0:30:81.28:0,81,4503	0/0:13,0:13:27.09:0,27,1611	0/0:22,0:22:57.20:0,57,3169	0/0:20,0:20:51.16:0,51,2747	0/0:35,0:35:84.24:0,84,4417	0/0:11,0:10:33.09:0,33,1789	0/0:20,0:20:48.16:0,48,2804	0/0:31,0:31:75.21:0,75,3921	0/0:11,0:11:33.11:0,33,1928
chr10	50022809	.	GC	G	2391.51	PASS	AB=0.975;AC=24;AF=0.429;AN=56;BaseQRankSum=0.854;DP=352;FS=28.602;HRun=10;HaplotypeScore=47.5407;InbreedingCoeff=0.7033;MQ=75.52;MQ0=0;MQRankSum=0.402;QD=13.14;ReadPosRankSum=3.301;VQSLOD=1.4130;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:30.80:0,31,362	1/1:3,7:10:17.99:156,18,0	0/1:14,0:12:1.05:1,0,130	0/1:13,0:11:2.01:2,0,89	0/0:10,0:10:18.04:0,18,193	1/1:2,15:17:38.97:337,39,0	1/1:1,16:17:38.99:339,39,0	0/0:11,0:12:8.71:0,9,55	1/1:1,11:12:29.99:260,30,0	0/0:9,0:10:17.87:0,18,168	0/0:14,0:14:33.04:0,33,342	1/1:0,5:7:13.07:90,13,0	1/1:0,11:11:32.99:286,33,0	0/0:14,1:15:13.15:0,13,363	1/1:1,17:18:32.99:287,33,0	0/0:19,2:21:2.05:0,2,469	0/0:19,0:19:45.12:0,45,496	0/0:13,1:14:10.04:0,10,338	0/0:5,0:9:17.34:0,17,104	0/0:2,0:7:5.83:0,6,37	0/0:4,0:8:11.68:0,12,84	1/1:2,8:10:20.95:175,21,0	1/1:2,6:8:11.99:102,12,0	1/1:2,22:24:62.99:547,63,0	0/1:12,0:12:10.36:10,0,117	0/1:8,1:9:1.99:2,0,201	0/0:4,0:11:11.66:0,12,76	0/0:2,0:2:6.02:0,6,66
chr10	50023179	.	A	AGTCTCTGTCTCT	6547.44	PASS	AB=1.000;AC=28;AF=0.500;AN=56;BaseQRankSum=-3.351;DP=820;FS=0.453;HRun=0;HaplotypeScore=229.6845;InbreedingCoeff=0.7743;MQ=70.16;MQ0=21;MQRankSum=-4.022;QD=16.29;ReadPosRankSum=-3.763;VQSLOD=3.2873;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:64,0:64:90.05:0,90,1579	0/0:16,0:16:29.46:0,29,438	0/0:84,0:29:28.16:0,28,347	0/0:94,0:34:44.22:0,44,644	0/0:22,0:22:51.16:0,51,1039	1/1:22,0:22:9.03:385,9,0	1/1:26,0:26:6.02:208,6,0	1/1:46,0:46:99:1676,102,0	1/1:28,0:28:18.06:746,18,0	0/0:20,0:20:45.14:0,45,1035	0/0:17,0:17:42.14:0,42,973	1/1:22,0:23:3.01:156,3,0	1/1:20,0:20:6.02:292,6,0	0/0:16,0:16:36.11:0,36,746	0/1:22,0:22:53.72:54,0,84	0/1:32,0:32:3.24:3,0,385	0/0:25,0:25:51.13:0,51,1014	0/0:16,0:16:36.10:0,36,822	1/1:11,16:27:51.06:998,51,0	1/1:18,0:18:18.02:353,18,0	1/1:30,0:28:30.10:488,30,0	1/1:32,0:32:6.02:240,6,0	1/1:26,0:26:6.01:256,6,0	1/1:26,0:25:8.96:191,9,0	0/0:15,0:15:36.11:0,36,789	0/0:18,0:18:48.14:0,48,1135	1/1:5,17:23:11.95:501,12,0	0/0:11,0:11:17.97:0,18,198
chr10	50023186	.	G	GTC	761.37	PASS	AB=0.920;AC=10;AF=0.179;AN=56;BaseQRankSum=7.148;DP=851;FS=0.000;HRun=0;HaplotypeScore=143.0369;InbreedingCoeff=0.4118;MQ=65.22;MQ0=22;MQRankSum=-1.907;QD=3.30;ReadPosRankSum=-0.680;VQSLOD=1.9157;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:40,33:75:99:263,0,139	1/1:19,0:19:11.44:96,11,0	0/0:81,0:25:33.64:0,34,514	0/0:92,0:30:60.29:0,60,596	0/0:25,0:25:60.33:0,60,705	0/0:20,0:20:4.68:0,5,63	0/0:23,0:23:3.46:0,3,25	0/0:54,0:54:83.85:0,84,1437	0/0:28,0:28:8.21:0,8,70	0/0:19,0:19:51.61:0,52,679	0/0:17,0:17:41.01:0,41,556	0/0:22,0:22:4.72:0,5,79	0/1:20,0:20:0.33:0,0,55	0/0:16,0:16:41.79:0,42,523	1/1:7,1:28:12:105,12,0	1/1:23,3:34:7.56:405,8,0	0/0:29,0:29:47.94:0,48,768	0/0:17,0:17:45.15:0,45,604	0/0:25,0:24:34.91:0,35,614	0/0:18,0:18:22.92:0,23,263	0/0:30,0:28:47.76:0,48,611	0/0:31,0:31:3.34:0,3,103	0/0:29,0:29:11.75:0,12,81	0/1:27,0:26:7.08:7,0,65	0/0:15,0:15:42.13:0,42,556	0/0:19,0:19:50.63:0,51,661	0/1:28,0:27:27.72:28,0,72	0/0:9,0:9:13.84:0,14,199
chr10	50023196	.	C	CTGTCTCTGTCTCTGTCTCTG	7322.85	PASS	AB=0.855;AC=20;AF=0.357;AN=56;BaseQRankSum=-1.039;DP=888;FS=13.687;HRun=0;HaplotypeScore=313.6706;InbreedingCoeff=0.2173;MQ=60.24;MQ0=21;MQRankSum=-3.433;QD=16.95;ReadPosRankSum=0.586;VQSLOD=2.1617;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:72,0:72:91.01:0,91,2825	0/1:18,0:18:99:113,0,679	0/0:83,0:22:38.26:0,38,612	0/0:92,0:26:46.52:0,47,910	0/0:25,0:26:23.76:0,24,1980	1/1:2,12:26:6.02:480,6,0	1/1:5,0:23:6.89:386,7,0	0/1:53,0:53:99:1008,0,142	1/1:4,0:32:23.70:1501,24,0	0/0:23,0:23:47.09:0,47,1949	0/0:20,0:20:57.16:0,57,1788	0/1:6,10:31:18.68:280,0,19	0/1:2,12:34:0.98:526,0,1	0/0:20,0:20:48.15:0,48,1435	0/0:26,0:26:20.44:0,20,373	0/1:27,0:27:55.90:56,0,1284	0/0:30,0:30:56.49:0,56,1860	0/0:16,0:16:36.10:0,36,1328	0/1:12,0:11:42.16:470,0,42	0/1:22,0:22:99:154,0,154	0/1:32,0:30:99:202,0,232	0/1:3,18:40:22.43:515,0,22	1/1:1,0:30:11.18:639,11,0	1/1:8,0:28:12.26:686,12,0	0/0:18,0:18:51.17:0,51,1489	0/0:21,0:21:62:0,62,1990	0/1:22,0:22:99:308,0,129	0/0:9,0:9:20.96:0,21,316
chr10	50025473	.	CGT	C	1885.34	PASS	AB=0.785;AC=31;AF=0.596;AN=52;BaseQRankSum=0.130;DP=515;FS=0.000;HRun=0;HaplotypeScore=98.9401;InbreedingCoeff=0.5120;MQ=65.31;MQ0=19;MQRankSum=1.174;QD=6.18;ReadPosRankSum=1.215;VQSLOD=2.6744;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:26:18.01:0,18,171	1/1:5,0:5:3:32,3,0	./.	./.	1/1:16,5:20:6.49:65,6,0	1/1:21,5:28:23.72:220,24,0	1/1:15,4:18:20.46:205,20,0	0/0:25,0:23:4.21:0,4,23	0/1:9,6:14:21.98:172,0,22	0/0:11,0:11:1.25:0,1,3	1/1:7,2:9:2.97:32,3,0	0/1:18,3:21:60.82:108,0,61	1/1:11,3:14:14.83:141,15,0	1/1:16,2:17:14.85:135,15,0	0/0:10,0:15:12:0,12,120	0/0:10,0:12:6:0,6,52	0/1:25,10:36:17.09:231,0,17	1/1:9,4:14:8.86:78,9,0	0/0:18,0:17:9.02:0,9,103	0/0:12,0:18:8.71:0,9,99	0/0:22,0:20:5.74:0,6,84	1/1:13,3:15:6.01:64,6,0	1/1:11,2:12:3.01:32,3,0	1/1:16,10:26:18.04:194,18,0	1/1:13,6:19:11.86:111,12,0	1/1:15,1:16:11.86:110,12,0	0/0:8,0:16:12.47:0,12,105	1/1:12,0:12:14.84:132,15,0
chr10	50027168	.	AC	A	3436.50	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=10.214;DP=648;FS=0.000;HRun=1;HaplotypeScore=61.8394;InbreedingCoeff=0.9997;MQ=83.34;MQ0=0;MQRankSum=-1.209;QD=39.05;ReadPosRankSum=2.595;VQSLOD=4.2389;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,28:28:78.26:1089,78,0	1/1:0,10:10:27.09:377,27,0	0/0:23,0:23:68.36:0,68,868	0/0:16,0:16:38.66:0,39,493	0/0:28,0:28:84.27:0,84,1234	0/0:15,0:15:45.14:0,45,650	0/0:17,0:17:51.14:0,51,722	0/0:36,0:36:99:0,108,1477	0/0:19,0:19:57.16:0,57,809	0/0:33,0:33:99:0,99,1420	0/0:33,0:33:96.27:0,96,1373	0/0:15,0:15:42.13:0,42,607	0/0:18,0:18:54.18:0,54,806	0/0:17,0:17:51.17:0,51,763	1/1:0,18:18:51.17:713,51,0	1/1:0,32:32:90.30:1257,90,0	0/0:25,0:25:75.23:0,75,1100	0/0:18,0:18:54.18:0,54,807	0/0:17,0:17:51.16:0,51,742	0/0:25,0:25:75.24:0,75,1097	0/0:29,0:29:87.28:0,87,1281	0/0:29,0:29:87.28:0,87,1275	0/0:31,0:31:93.16:0,93,1279	0/0:21,0:21:63.20:0,63,922	0/0:34,0:34:99:0,102,1526	0/0:24,0:24:72.22:0,72,1055	0/0:19,0:19:57.19:0,57,851	0/0:18,0:18:54.18:0,54,807
chr10	50028521	.	TAC	T	171.23	PASS	AB=0.928;AC=12;AF=0.261;AN=46;BaseQRankSum=4.547;DP=524;FS=0.923;HRun=0;HaplotypeScore=80.8691;InbreedingCoeff=0.1489;MQ=58.95;MQ0=13;MQRankSum=-1.504;QD=0.98;ReadPosRankSum=-0.785;VQSLOD=1.4411;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:26,7:32:6.01:64,6,0	0/0:6,0:6:3.01:0,3,44	./.	./.	0/0:8,0:8:6.02:0,6,76	0/0:9,0:9:12.03:0,12,154	0/1:21,2:23:17.21:17,0,141	./.	0/1:15,1:15:40.94:41,0,98	0/1:14,1:15:14.20:14,0,173	0/0:5,0:4:6.02:0,6,72	0/1:18,2:20:14.19:14,0,200	0/0:10,0:10:7.82:0,8,67	0/0:16,0:16:20.70:0,21,186	0/0:20,0:20:18.23:0,18,326	0/1:15,1:16:32.56:48,0,33	0/1:25,1:25:36.82:37,0,318	0/0:34,0:36:51.02:0,51,588	1/1:15,0:19:8.05:36,8,0	./.	0/0:44,0:45:5.42:0,5,43	0/0:12,0:12:8.99:0,9,107	./.	0/0:34,0:34:36.04:0,36,445	0/0:13,0:13:18.03:0,18,226	0/0:25,0:25:12.02:0,12,127	1/1:3,0:6:8.25:41,8,0	0/0:5,0:4:6.02:0,6,86
chr10	50028688	.	TA	T	6737.47	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=8.400;DP=578;FS=2.920;HRun=11;HaplotypeScore=62.2571;InbreedingCoeff=0.9910;MQ=72.25;MQ0=0;MQRankSum=-1.490;QD=19.09;ReadPosRankSum=4.173;VQSLOD=5.9020;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,32:33:71.92:591,72,0	1/1:0,6:6:14.98:123,15,0	0/0:18,1:17:22.13:0,22,374	0/0:11,0:9:10.74:0,11,100	0/0:17,0:17:45.05:0,45,443	1/1:1,24:25:59.93:492,60,0	1/1:1,16:18:40.99:326,41,0	1/1:4,26:30:77.86:635,78,0	1/1:5,22:27:59.91:492,60,0	0/0:34,0:34:84.20:0,84,887	0/0:19,1:20:32.48:0,32,535	1/1:2,24:26:67.67:540,68,0	1/1:3,14:17:38.93:320,39,0	0/0:16,0:16:39.02:0,39,379	1/1:4,16:20:47.91:394,48,0	1/1:0,16:16:44.95:369,45,0	0/0:17,0:17:48.11:0,48,504	0/0:25,0:25:69.17:0,69,733	1/1:6,17:23:47.87:392,48,0	1/1:0,15:15:41.86:333,42,0	1/1:2,18:20:50.94:419,51,0	1/1:2,14:16:28.74:226,29,0	1/1:0,11:11:29.97:246,30,0	1/1:3,30:33:68.92:567,69,0	0/0:19,0:18:57.12:0,57,593	0/0:34,1:35:68.48:0,68,872	1/1:5,12:17:32.96:271,33,0	0/0:12,0:12:27.04:0,27,276
chr10	50030242	.	A	AGT	1676.31	PASS	AC=30;AF=0.556;AN=54;BaseQRankSum=3.148;DP=457;FS=0.742;HRun=0;HaplotypeScore=100.6783;InbreedingCoeff=0.7109;MQ=58.67;MQ0=11;MQRankSum=-2.921;QD=6.65;ReadPosRankSum=-0.614;VQSLOD=3.2437;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:21:5.98:61,6,0	1/1:9,0:9:2.98:21,3,0	./.	0/0:12,0:8:1.25:0,1,3	1/1:10,6:17:12.04:168,12,0	1/1:23,0:26:23.97:201,24,0	1/1:20,0:21:20.93:163,21,0	0/0:17,0:18:3.07:0,3,11	1/1:12,1:14:9:95,9,0	1/1:9,6:15:18.03:241,18,0	1/1:12,3:15:6.01:71,6,0	1/1:15,0:17:23.98:204,24,0	1/1:12,0:12:14.97:127,15,0	0/0:14,0:14:8.85:0,9,80	1/1:19,0:18:2.96:19,3,0	1/1:13,0:13:8.95:78,9,0	0/0:31,0:32:44.40:0,44,398	0/0:13,0:14:14.87:0,15,146	0/0:22,0:21:3.31:0,3,15	0/0:13,0:13:0:0,0,0	0/0:9,0:8:3:0,3,26	1/1:13,0:12:6:52,6,0	1/1:16,0:15:14.98:125,15,0	1/1:19,0:20:26.97:231,27,0	0/0:15,0:17:11.85:0,12,106	0/0:17,0:17:14.80:0,15,150	0/0:11,0:12:11.32:0,11,55	0/0:5,0:7:5.84:0,6,39
chr10	50030281	.	CG	C	1871.40	PASS	AB=0.930;AC=26;AF=0.464;AN=56;BaseQRankSum=3.611;DP=347;FS=0.000;HRun=10;HaplotypeScore=68.6374;InbreedingCoeff=0.8076;MQ=68.03;MQ0=10;MQRankSum=-1.796;QD=10.51;ReadPosRankSum=3.144;VQSLOD=2.6705;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,13:16:41.03:344,41,0	1/1:0,0:7:9.97:28,10,0	0/0:20,0:11:7.90:0,8,119	0/0:11,0:9:20.18:0,20,184	0/0:15,0:15:30.04:0,30,304	1/1:5,14:19:41.97:364,42,0	1/1:8,9:17:23.96:205,24,0	0/0:5,0:5:3.73:0,4,16	1/1:2,6:8:17.99:156,18,0	0/0:9,0:8:12.03:0,12,126	0/0:11,0:11:21.06:0,21,231	1/1:3,11:14:23.99:207,24,0	1/1:2,3:5:5.99:52,6,0	0/0:6,0:6:15:0,15,144	1/1:0,0:13:15.50:45,16,0	1/1:1,7:8:17.99:156,18,0	0/0:28,1:31:46.42:0,46,693	0/0:10,0:10:27.05:0,27,282	0/0:5,0:8:16.69:0,17,113	0/0:8,0:10:9.47:0,9,83	0/0:8,0:7:12.02:0,12,125	1/1:5,8:10:20.90:182,21,0	1/1:2,9:11:23.83:207,24,0	1/1:8,12:19:14.98:130,15,0	0/0:19,0:19:13.24:0,13,372	0/1:11,1:12:5.07:5,0,139	0/1:12,1:14:3.37:3,0,125	0/0:5,0:5:12.02:0,12,125
chr10	50032606	.	A	AAC	581.43	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-3.305;DP=535;FS=5.110;HRun=0;HaplotypeScore=75.0084;InbreedingCoeff=0.9111;MQ=74.30;MQ0=4;MQRankSum=-0.646;QD=29.07;ReadPosRankSum=2.042;VQSLOD=4.9465;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:93.28:0,93,1150	1/1:1,5:6:12.04:199,12,0	0/0:31,0:23:18.93:0,19,215	0/0:38,0:22:12.66:0,13,312	0/0:11,0:11:24.08:0,24,302	0/0:17,0:17:42.09:0,42,480	0/0:29,0:29:72.19:0,72,878	0/0:26,0:25:57.18:0,57,717	0/0:16,0:16:42.12:0,42,518	0/0:9,0:9:24.08:0,24,303	0/0:16,0:16:42.13:0,42,530	0/0:21,0:21:38.99:0,39,479	0/0:13,0:13:33.11:0,33,416	0/0:12,0:10:24.08:0,24,303	1/1:3,11:14:30.10:498,30,0	0/0:12,0:12:30.07:0,30,352	0/0:17,0:17:39.11:0,39,477	0/0:11,0:11:24.07:0,24,294	0/0:12,0:12:27.08:0,27,329	0/0:17,0:17:30.10:0,30,378	0/0:42,0:42:99:0,108,1337	0/0:22,0:22:54.17:0,54,681	0/0:14,0:14:30.08:0,30,365	0/0:32,0:32:81.20:0,81,989	0/0:11,0:11:30.10:0,30,378	0/0:12,0:12:30.09:0,30,368	0/0:27,0:27:57.17:0,57,702	0/0:4,0:4:6.02:0,6,76
chr10	50034208	.	C	CA	1214.55	PASS	AB=0.894;AC=12;AF=0.214;AN=56;BaseQRankSum=-5.216;DP=572;FS=1.113;HRun=12;HaplotypeScore=65.5572;InbreedingCoeff=0.4802;MQ=60.04;MQ0=28;MQRankSum=1.483;QD=6.90;ReadPosRankSum=1.523;VQSLOD=2.2424;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,24:30:23.11:377,23,0	0/1:4,6:11:4.04:113,0,4	0/1:24,0:8:10.58:11,0,53	0/1:22,0:9:10.98:11,0,38	0/0:23,0:25:59.14:0,59,423	0/0:10,0:10:26.83:0,27,195	0/0:11,0:13:35.09:0,35,228	0/0:35,0:36:82.46:0,82,594	0/0:12,0:14:28.88:0,29,203	0/0:13,0:12:29.79:0,30,217	0/1:14,2:15:2.36:2,0,147	0/0:19,0:21:48.79:0,49,340	0/0:12,0:13:28.83:0,29,203	0/0:13,0:12:29.75:0,30,215	1/1:5,18:25:50.91:478,51,0	1/1:2,15:18:23:372,23,0	0/0:30,0:33:66.68:0,67,469	0/0:27,0:28:55.64:0,56,399	0/1:16,1:18:0.31:0,0,152	0/0:24,0:26:54.68:0,55,380	0/0:22,0:21:37.43:0,37,266	0/0:16,0:17:37.66:0,38,262	0/0:15,0:15:26.49:0,26,188	0/0:27,1:30:34.43:0,34,392	0/0:15,0:17:33.89:0,34,231	0/0:17,1:18:12.54:0,13,253	0/0:29,0:27:53.41:0,53,393	0/1:10,1:10:8.35:8,0,110
chr10	50034763	.	GTTTA	G	736.34	PASS	AB=1.000;AC=6;AF=0.107;AN=56;BaseQRankSum=6.688;DP=685;FS=1.887;HRun=0;HaplotypeScore=142.9010;InbreedingCoeff=0.6345;MQ=58.12;MQ0=11;MQRankSum=-4.207;QD=9.44;ReadPosRankSum=0.404;VQSLOD=3.0450;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:25:17.56:0,18,1319	1/1:0,10:10:24.07:404,24,0	0/0:40,0:16:40.34:0,40,637	0/0:36,0:18:51.51:0,52,794	0/0:39,0:39:99:0,114,2531	0/0:34,0:33:87.26:0,87,1319	0/0:19,0:19:49.76:0,50,615	0/0:33,0:33:7.81:0,8,933	0/0:17,0:15:21.87:0,22,489	0/0:24,0:23:66.06:0,66,1423	0/0:22,0:22:66.01:0,66,1521	0/0:25,0:25:66.46:0,66,887	0/0:22,0:22:58.08:0,58,885	0/0:15,0:15:31.20:0,31,928	1/1:9,6:14:29.69:435,30,0	0/0:18,0:18:54.18:0,54,1208	0/0:26,0:26:78.25:0,78,1616	0/0:15,0:15:27.60:0,28,552	0/0:26,0:22:23.23:0,23,572	0/1:26,0:26:24.22:24,0,352	0/0:26,0:26:30.34:0,30,396	0/0:27,0:27:73.76:0,74,986	0/0:30,0:30:77.93:0,78,1001	0/0:20,0:19:42.12:0,42,704	0/0:33,0:33:96.03:0,96,1889	0/0:28,0:28:74.40:0,74,1782	0/1:27,0:27:3.75:4,0,221	0/0:4,0:4:12.04:0,12,285
chr10	50034767	.	ATG	A	4958.38	PASS	AB=0.818;AC=29;AF=0.518;AN=56;BaseQRankSum=9.108;DP=682;FS=1.186;HRun=0;HaplotypeScore=105.4953;InbreedingCoeff=0.4939;MQ=57.13;MQ0=11;MQRankSum=0.220;QD=11.58;ReadPosRankSum=2.666;VQSLOD=4.3830;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:24,2:25:8.33:8,0,572	0/0:10,0:10:15.87:0,16,91	0/0:39,0:13:14.56:0,15,138	0/0:37,0:18:21.18:0,21,199	0/0:38,2:40:33.90:0,34,985	1/1:8,21:28:51.15:601,51,0	1/1:9,11:20:29.21:331,29,0	0/1:17,0:33:7.24:150,0,7	1/1:3,13:15:32.93:367,33,0	0/0:24,0:23:15.28:0,15,560	0/1:22,2:24:14.05:14,0,645	1/1:4,17:23:56.67:607,57,0	1/1:7,15:22:41.96:473,42,0	0/0:16,0:16:32.96:0,33,465	0/0:9,0:15:24.24:0,24,135	0/0:16,1:17:3.79:0,4,509	0/0:25,0:26:51.10:0,51,741	0/1:12,3:17:93.13:93,0,159	1/1:16,0:23:25.56:126,26,0	1/1:7,1:27:47.20:267,47,0	1/1:7,1:24:37.10:203,37,0	1/1:7,18:25:54.16:629,54,0	1/1:10,17:29:50.82:558,51,0	0/1:9,9:17:26.27:191,0,26	0/1:32,3:35:39.78:40,0,787	0/0:28,1:29:36.69:0,37,932	1/1:5,0:27:56.72:278,57,0	0/1:3,1:4:23.30:23,0,107
chr10	50035009	.	CAGATAGATAGATAGAT	C	5556.35	PASS	AB=0.782;AC=22;AF=0.423;AN=52;BaseQRankSum=7.860;DP=481;FS=3.755;HRun=0;HaplotypeScore=216.1816;InbreedingCoeff=0.5158;MQ=61.67;MQ0=5;MQRankSum=-9.330;QD=23.15;ReadPosRankSum=-1.587;VQSLOD=3.7008;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:3:0,3,26	1/1:3,2:5:6.02:260,6,0	./.	0/0:13,0:8:2.98:0,3,21	0/0:26,0:26:45.15:0,45,3047	0/1:10,0:15:75.05:80,0,75	0/0:7,0:7:3.01:0,3,146	1/1:21,0:21:3.01:43,3,0	1/1:12,8:20:15.05:650,15,0	0/0:25,0:25:39.13:0,39,2367	0/0:12,0:13:18.06:0,18,1246	1/1:10,3:13:9.03:390,9,0	1/1:7,4:11:6.02:260,6,0	0/0:13,0:24:48.16:0,48,1930	1/1:12,9:22:27.09:1152,27,0	1/1:25,0:25:15.05:289,15,0	0/0:21,0:21:36.11:0,36,1935	0/0:15,0:15:33.11:0,33,2269	0/1:12,0:15:58.83:59,0,191	0/1:12,0:21:7.35:200,0,7	./.	1/1:8,8:16:21.07:910,21,0	1/1:10,13:23:26.88:1126,27,0	0/0:7,2:9:0:0,0,0	0/0:10,0:20:27.09:0,27,456	0/0:25,0:25:42.14:0,42,2752	0/1:27,0:33:99:137,0,105	0/0:6,0:6:9.03:0,9,459
chr10	50035046	.	AGATAGATAGATAG	A	4423.16	PASS	AB=0.979;AC=16;AF=0.286;AN=56;BaseQRankSum=12.111;DP=501;FS=3.722;HRun=0;HaplotypeScore=199.5799;InbreedingCoeff=-0.2370;MQ=51.64;MQ0=10;MQRankSum=-9.986;QD=17.55;ReadPosRankSum=7.782;VQSLOD=2.8353;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:8,0:14:59.36:258,0,59	0/1:7,0:7:34.93:151,0,35	0/0:13,0:4:12.04:0,12,176	0/0:11,0:4:12.04:0,12,176	0/0:29,0:29:84.27:0,84,3733	0/1:18,0:18:99:123,0,420	0/1:14,0:14:12.25:12,0,488	0/0:20,0:20:58.43:0,58,789	0/1:20,0:20:99:368,0,234	0/0:29,0:29:87.30:0,87,3168	0/0:26,0:26:72.23:0,72,2592	0/1:14,0:14:99:233,0,173	0/1:10,0:10:99:140,0,199	0/0:26,0:26:75.25:0,75,2163	0/1:24,0:24:99:674,0,306	1/1:0,22:22:15.05:628,15,0	0/0:20,0:20:57.19:0,57,2301	0/0:17,0:17:49.72:0,50,2354	0/1:15,0:13:99:105,0,422	0/1:16,0:16:99:364,0,197	0/1:10,0:10:16.93:17,0,184	0/1:15,0:15:72.14:531,0,72	0/1:25,0:25:99:620,0,382	0/0:10,0:9:8.60:0,9,132	0/0:21,0:21:51.08:0,51,601	0/0:22,0:22:66.23:0,66,3014	0/1:28,0:28:99:201,0,751	0/0:5,0:5:15.05:0,15,491
chr10	50035058	.	AG	A	308.35	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=10.988;DP=489;FS=3.516;HRun=1;HaplotypeScore=106.0951;InbreedingCoeff=0.6287;MQ=57.21;MQ0=5;MQRankSum=-8.976;QD=7.01;ReadPosRankSum=4.888;VQSLOD=1.1195;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,10:11:26.96:311,27,0	0/0:5,0:5:1.45:0,1,41	0/0:16,0:8:21.07:0,21,306	0/0:8,0:6:18.06:0,18,263	0/0:34,0:34:96.33:0,96,1467	0/0:15,0:15:23.13:0,23,349	0/0:13,0:13:33.11:0,33,485	0/0:28,0:28:84.26:0,84,1181	0/0:14,0:14:8.21:0,8,170	0/0:26,0:26:77.06:0,77,1128	0/0:28,0:28:74.04:0,74,1092	0/1:11,0:11:4.20:4,0,181	0/0:11,0:11:16.40:0,16,261	0/0:24,0:24:52.38:0,52,501	0/0:22,0:22:17.22:0,17,339	1/1:22,0:22:14.94:113,15,0	0/0:20,0:20:54.18:0,54,819	0/0:18,0:18:51.64:0,52,785	0/0:12,0:11:3.22:0,3,327	0/0:16,0:16:24.59:0,25,328	0/0:7,0:7:14.99:0,15,220	0/0:16,0:16:9.09:0,9,162	0/0:29,0:29:38.46:0,38,627	0/0:11,0:10:12.29:0,12,176	0/0:22,0:22:35.22:0,35,453	0/0:20,0:20:60.20:0,60,929	0/0:26,0:26:55.41:0,55,811	0/0:4,0:4:12.04:0,12,182
chr10	50035295	.	CA	C	5625.32	PASS	AB=0.934;AC=33;AF=0.589;AN=56;BaseQRankSum=5.463;DP=528;FS=5.793;HRun=11;HaplotypeScore=61.5260;InbreedingCoeff=0.7383;MQ=60.34;MQ0=18;MQRankSum=2.347;QD=15.89;ReadPosRankSum=0.720;VQSLOD=5.6787;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,33:37:51.06:738,51,0	0/0:6,0:6:18.05:0,18,192	0/1:17,1:15:12.83:13,0,208	0/0:9,1:7:9.67:0,10,73	0/1:19,4:23:22.85:23,0,382	1/1:2,11:13:26.97:222,27,0	1/1:1,22:23:61.96:498,62,0	1/1:5,25:29:74.87:610,75,0	1/1:4,11:17:34.02:258,34,0	0/0:23,0:22:63.16:0,63,669	0/0:15,1:16:23.42:0,23,431	1/1:2,14:16:38.95:320,39,0	1/1:2,13:14:32.93:271,33,0	0/0:16,0:16:39.10:0,39,415	0/0:19,1:20:20.46:0,20,416	1/1:4,14:18:12.93:313,13,0	0/0:27,0:28:57.95:0,58,619	0/0:17,0:14:29.91:0,30,302	1/1:4,19:22:27.92:435,28,0	1/1:5,27:30:67.06:554,67,0	1/1:3,11:13:29.70:246,30,0	1/1:2,8:10:23.97:197,24,0	1/1:3,12:14:32.95:271,33,0	1/1:8,11:16:0.98:214,1,0	0/0:19,0:18:39.10:0,39,416	0/0:17,1:17:20.43:0,20,410	1/1:7,17:23:52.97:424,53,0	0/1:4,0:3:18.09:18,0,26
chr10	50037581	.	C	CTT	2420.80	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-4.450;DP=580;FS=5.695;HRun=1;HaplotypeScore=75.6561;InbreedingCoeff=0.9975;MQ=72.10;MQ0=2;MQRankSum=-0.515;QD=41.74;ReadPosRankSum=0.076;VQSLOD=3.5215;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,34:34:81.28:1559,81,0	0/0:7,0:7:21.07:0,21,321	0/0:14,0:14:36.12:0,36,551	0/0:18,0:17:34.53:0,35,471	0/0:21,0:21:51.16:0,51,757	0/0:14,0:14:36.12:0,36,549	0/0:19,0:19:57.19:0,57,863	0/0:18,0:18:54.16:0,54,771	0/0:22,0:22:60.20:0,60,911	0/0:23,0:23:66.19:0,66,970	0/0:13,0:13:36.12:0,36,549	0/0:28,0:28:78.20:0,78,1123	0/0:14,0:14:42.14:0,42,641	0/0:29,0:29:78.06:0,78,1116	0/0:20,0:20:54.18:0,54,825	1/1:0,22:22:51.17:983,51,0	0/0:25,0:25:72.20:0,72,1073	0/0:20,0:20:57.17:0,57,848	0/0:20,0:20:48.07:0,48,643	0/0:21,0:21:57.19:0,57,871	0/0:28,0:28:84.27:0,84,1263	0/0:21,0:21:57.18:0,57,849	0/0:14,0:14:39.12:0,39,573	0/0:25,0:25:69.17:0,69,1027	0/0:28,0:28:75.24:0,75,1124	0/0:21,0:21:63.17:0,63,911	0/0:25,0:25:66.22:0,66,1006	0/0:14,0:14:42.07:0,42,591
chr10	50038018	.	TCTCCCTCTCTCC	T	271.08	PASS	AB=1.000;AC=5;AF=0.093;AN=54;BaseQRankSum=5.541;DP=369;FS=5.067;HRun=0;HaplotypeScore=119.9691;InbreedingCoeff=0.6408;MQ=62.12;MQ0=14;MQRankSum=-1.187;QD=10.04;ReadPosRankSum=0.409;VQSLOD=2.0963;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:9,4:12:21.07:282,21,0	./.	0/0:28,0:12:12.76:0,13,317	0/0:40,0:27:33.27:0,33,709	0/0:12,0:11:24.07:0,24,907	0/0:15,0:15:36.05:0,36,870	0/0:15,0:15:35.72:0,36,476	0/0:14,0:14:36.11:0,36,513	0/0:13,0:12:32.89:0,33,947	0/0:24,0:20:56.21:0,56,1412	0/0:11,0:10:9.03:0,9,236	0/0:6,0:6:14.92:0,15,413	0/0:8,0:7:17.99:0,18,449	0/0:8,0:8:15.05:0,15,405	0/0:6,0:5:6.90:0,7,68	1/1:4,1:5:6.02:88,6,0	0/0:12,0:12:36.12:0,36,1180	0/0:17,0:15:33.03:0,33,1019	0/0:12,0:8:21.01:0,21,355	0/0:12,0:12:32.42:0,32,572	0/0:16,0:13:33.09:0,33,475	0/0:13,0:13:27.09:0,27,446	0/0:16,0:16:38.73:0,39,627	0/0:10,0:9:24.08:0,24,486	0/0:12,0:11:15.02:0,15,465	0/0:16,0:16:48.12:0,48,1286	0/1:9,0:9:20.21:20,0,690	0/0:5,0:4:12:0,12,168
chr10	50038078	.	A	ATGTGTG	1079.37	PASS	AB=1.000;AC=29;AF=0.580;AN=50;BaseQRankSum=0.558;DP=355;FS=7.854;HRun=0;HaplotypeScore=86.0772;InbreedingCoeff=0.5762;MQ=36.48;MQ0=55;MQRankSum=-0.751;QD=5.59;ReadPosRankSum=-4.856;VQSLOD=-0.6477;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:13:5.97:0,6,61	1/1:4,0:4:3.48:70,3,0	./.	./.	0/0:17,0:15:9.03:0,9,162	./.	1/1:18,0:15:6.96:79,7,0	1/1:16,0:14:2.44:6,2,0	1/1:12,2:13:2.37:8,2,0	0/0:21,0:19:14.99:0,15,208	0/0:11,0:10:6.02:0,6,120	1/1:6,2:7:2.86:94,3,0	1/1:6,2:11:12.51:268,13,0	0/0:12,0:12:11.80:0,12,236	1/1:9,0:7:0.47:1,0,0	0/0:8,0:8:9.03:0,9,129	0/0:20,0:16:4.46:0,4,104	0/0:20,0:16:8.99:0,9,140	1/1:15,0:8:6.02:116,6,0	1/1:15,0:11:6.02:130,6,0	1/1:14,0:8:0.47:1,0,0	1/1:14,0:13:8.99:90,9,0	1/1:9,0:9:12.47:149,12,0	1/1:17,1:12:6.02:125,6,0	0/0:10,0:10:15.05:0,15,280	0/1:15,0:11:10.06:10,0,59	1/1:9,0:8:6.02:96,6,0	0/0:11,0:6:9.42:0,9,138
chr10	50038619	.	C	CA	2567.68	PASS	AB=0.958;AC=18;AF=0.321;AN=56;BaseQRankSum=-0.687;DP=519;FS=0.921;HRun=9;HaplotypeScore=65.9480;InbreedingCoeff=0.8448;MQ=64.66;MQ0=6;MQRankSum=0.779;QD=15.47;ReadPosRankSum=-1.262;VQSLOD=3.5429;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,2:28:5.61:0,6,506	0/0:10,0:10:26.99:0,27,234	0/1:20,2:10:36.75:44,0,37	0/1:17,0:11:1.36:1,0,22	0/0:23,0:23:53.98:0,54,469	1/1:6,13:19:19.07:438,19,0	1/1:2,10:12:24.06:265,24,0	0/0:28,0:28:63.44:0,63,545	1/1:6,10:16:30.06:317,30,0	0/0:18,0:18:41.97:0,42,365	0/0:24,0:24:50.97:0,51,439	1/1:3,10:13:36.07:381,36,0	1/1:2,9:11:24.06:265,24,0	0/0:14,0:13:23.98:0,24,208	0/0:16,0:16:44.99:0,45,391	0/0:16,0:16:26.49:0,26,227	0/0:38,0:39:99:0,103,866	0/0:14,0:15:20.57:0,21,248	0/0:22,0:21:47.90:0,48,404	0/0:25,0:25:50.95:0,51,443	0/0:12,0:12:29.95:0,30,253	1/1:6,10:16:30.08:332,30,0	1/1:7,14:21:26.12:297,26,0	1/1:4,15:18:39.11:431,39,0	0/0:16,0:16:26.98:0,27,234	0/0:17,0:17:35.96:0,36,310	0/0:23,1:24:14.29:0,14,340	0/0:6,0:6:18:0,18,156
chr10	50038705	.	AT	A	7533.55	PASS	AB=0.682;AC=32;AF=0.571;AN=56;BaseQRankSum=9.294;DP=548;FS=0.000;HRun=8;HaplotypeScore=58.3361;InbreedingCoeff=0.8517;MQ=79.23;MQ0=0;MQRankSum=0.030;QD=22.42;ReadPosRankSum=-0.343;VQSLOD=4.8823;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:9,14:23:49.50:144,0,50	1/1:1,8:9:21.03:203,21,0	0/0:18,0:18:39:0,39,394	0/0:10,0:10:21.01:0,21,226	0/0:25,0:25:69.21:0,69,834	1/1:1,22:23:60.09:579,60,0	1/1:2,19:21:51.08:493,51,0	1/1:7,17:24:17.84:456,18,0	1/1:1,10:11:30.05:290,30,0	0/0:27,0:27:72.21:0,72,852	0/0:14,0:14:42.12:0,42,497	1/1:0,21:21:60.09:579,60,0	1/1:0,19:19:57.09:550,57,0	0/0:20,0:20:57.17:0,57,689	1/1:0,16:16:48.08:464,48,0	0/1:15,8:23:72.97:73,0,131	0/0:32,0:32:93.29:0,93,1123	0/0:14,0:14:36.11:0,36,433	1/1:2,18:20:54.08:521,54,0	1/1:5,26:31:75.11:724,75,0	1/1:1,16:17:48.08:464,48,0	1/1:2,16:18:48.08:464,48,0	1/1:0,21:21:53.95:521,54,0	1/1:0,18:18:48.07:464,48,0	0/0:15,0:15:45.14:0,45,544	0/0:25,0:25:72.22:0,72,870	1/1:2,19:21:57.08:545,57,0	0/0:12,0:12:30.09:0,30,362
chr10	50039205	.	TAAA	T	6875.87	PASS	AB=0.778;AC=19;AF=0.339;AN=56;BaseQRankSum=14.621;DP=508;FS=0.356;HRun=7;HaplotypeScore=73.6861;InbreedingCoeff=0.9072;MQ=74.39;MQ0=0;MQRankSum=-3.806;QD=37.78;ReadPosRankSum=-0.059;VQSLOD=3.8346;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,20:20:45.07:638,45,0	1/1:0,8:8:21.07:322,21,0	0/0:13,0:13:30.57:0,31,584	0/1:5,0:7:13.87:14,0,170	0/0:21,0:21:60.21:0,60,1325	0/0:20,0:20:57.18:0,57,1215	0/0:18,0:18:51.17:0,51,1099	1/1:4,19:23:57.16:831,57,0	0/0:26,0:26:78.27:0,78,1743	0/0:21,0:21:54.19:0,54,1204	0/0:11,0:11:27.09:0,27,587	0/0:15,0:15:42.14:0,42,938	0/0:24,0:24:72.25:0,72,1608	0/0:19,0:19:54.17:0,54,1130	1/1:3,20:23:57.14:848,57,0	1/1:1,22:23:66.22:1012,66,0	0/0:33,0:32:93.31:0,93,2033	0/0:14,0:14:39.13:0,39,871	1/1:0,17:17:51.16:762,51,0	1/1:1,25:26:72.24:1104,72,0	1/1:0,3:3:6.49:84,6,0	0/0:11,0:11:33.11:0,33,737	0/0:9,0:9:27.09:0,27,603	0/0:17,0:17:42.14:0,42,938	0/0:17,0:17:48.16:0,48,1033	0/0:25,0:25:69.23:0,69,1501	1/1:2,30:32:84.24:1262,84,0	0/0:12,0:12:33.11:0,33,737
chr10	50039441	.	TA	T	899.99	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.084;DP=383;FS=2.538;HRun=5;HaplotypeScore=35.3612;InbreedingCoeff=0.8319;MQ=69.30;MQ0=0;MQRankSum=0.691;QD=29.03;ReadPosRankSum=0.589;VQSLOD=3.2966;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,19:19:57.16:647,57,0	0/0:6,0:6:18.06:0,18,246	0/0:7,0:7:21.07:0,21,287	0/0:4,0:3:9.03:0,9,123	0/0:21,0:21:63.21:0,63,859	0/0:14,0:14:39.12:0,39,516	0/0:12,0:12:30.08:0,30,393	0/0:36,0:36:99:0,99,1327	0/0:7,0:7:18.06:0,18,246	0/0:21,0:22:59.25:0,59,844	0/0:21,0:21:60.19:0,60,805	0/0:6,0:6:18.06:0,18,246	0/0:15,0:15:45.14:0,45,600	0/0:10,0:10:27.09:0,27,369	0/0:13,0:13:33.10:0,33,435	1/1:0,12:12:33.09:374,33,0	0/0:22,0:22:60.20:0,60,821	0/0:12,0:12:30.10:0,30,410	0/0:23,0:23:63.21:0,63,862	0/0:8,0:8:21.07:0,21,287	0/0:8,0:8:18.06:0,18,246	0/0:2,0:2:6.02:0,6,82	0/0:10,0:10:30.10:0,30,407	0/0:2,0:2:3.01:0,3,41	0/0:16,0:16:45.15:0,45,615	0/0:23,0:23:69.23:0,69,944	0/0:14,0:14:42.13:0,42,560	0/0:18,0:18:54.18:0,54,739
chr10	50042116	.	T	TG	909.52	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-2.121;DP=579;FS=0.000;HRun=7;HaplotypeScore=64.1529;InbreedingCoeff=0.9334;MQ=93.74;MQ0=0;MQRankSum=-3.849;QD=15.42;ReadPosRankSum=2.558;VQSLOD=3.3458;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,0:18:20.12:103,20,0	1/1:2,5:7:15.05:181,15,0	0/0:23,0:23:53.43:0,53,435	0/0:30,0:29:28.37:0,28,446	0/0:24,0:24:66.09:0,66,630	0/0:27,0:27:69.09:0,69,660	0/0:20,0:20:57.05:0,57,533	0/0:36,0:36:93.14:0,93,894	0/0:21,0:21:60.09:0,60,579	0/0:21,0:21:54.08:0,54,521	0/0:15,0:15:33.04:0,33,318	0/0:20,0:20:51.06:0,51,486	0/0:24,0:24:66.06:0,66,624	0/0:18,0:18:42.06:0,42,405	1/1:1,23:24:63.19:759,63,0	1/1:4,0:10:2.78:14,3,0	0/0:20,0:20:54.09:0,54,521	0/0:18,0:18:51.05:0,51,485	0/0:13,0:13:30.05:0,30,289	0/0:21,0:21:54.08:0,54,520	0/0:22,0:22:63.06:0,63,596	0/0:18,0:18:45.06:0,45,435	0/0:20,0:20:51.08:0,51,492	0/0:20,0:20:54.08:0,54,521	0/0:23,0:23:57.05:0,57,540	0/0:36,0:36:93.14:0,93,898	0/0:26,0:25:69.11:0,69,666	0/0:4,0:4:12.02:0,12,116
chr10	50042512	.	C	CAGGT	3597.18	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-4.451;DP=724;FS=1.872;HRun=0;HaplotypeScore=118.3505;InbreedingCoeff=0.9097;MQ=86.07;MQ0=0;MQRankSum=-4.809;QD=55.34;ReadPosRankSum=1.954;VQSLOD=4.7966;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,29:40:72.25:1918,72,0	0/0:11,0:11:33.10:0,33,563	0/0:23,0:23:60.21:0,60,1095	0/0:26,0:26:59.94:0,60,1050	0/0:27,0:27:78.25:0,78,1421	0/0:27,0:27:81.28:0,81,1489	0/0:26,0:26:69.22:0,69,1236	0/0:33,0:33:75.26:0,75,1389	0/0:32,0:32:90.27:0,90,1584	0/0:26,0:26:75.20:0,75,1399	0/0:23,0:23:66.22:0,66,1202	0/0:26,0:26:72.25:0,72,1344	0/0:30,0:30:87.28:0,87,1569	0/0:26,0:26:72.25:0,72,1343	0/0:27,0:27:75.26:0,75,1391	1/1:3,22:25:16.19:1679,16,0	0/0:32,0:32:93.31:0,93,1704	0/0:11,0:11:27.09:0,27,504	0/0:13,0:13:36.12:0,36,644	0/0:27,0:27:72.25:0,72,1342	0/0:32,0:32:84.24:0,84,1473	0/0:28,0:28:81.28:0,81,1510	0/0:25,0:25:66.21:0,66,1199	0/0:27,0:27:66.19:0,66,1166	0/0:28,0:28:78.27:0,78,1438	0/0:30,0:30:81.27:0,81,1482	0/0:42,0:42:99:0,120,2207	0/0:1,0:1:3.01:0,3,56
chr10	50043065	.	TTACTGCAGA	T	3706.32	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=10.022;DP=660;FS=2.966;HRun=0;HaplotypeScore=174.2904;InbreedingCoeff=0.9992;MQ=76.64;MQ0=0;MQRankSum=-10.218;QD=88.25;ReadPosRankSum=4.013;VQSLOD=3.6845;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:96.33:0,96,4605	1/1:0,9:9:27.09:875,27,0	0/0:17,0:17:48.11:0,48,1909	0/0:15,0:15:42.08:0,42,1712	0/0:30,0:30:90.31:0,90,4329	0/0:27,0:27:81.25:0,81,3817	0/0:18,0:18:54.19:0,54,2562	0/0:39,0:39:99:0,117,5057	0/0:25,0:25:75.26:0,75,3431	0/0:25,0:25:75.25:0,75,3482	0/0:15,0:15:45.15:0,45,2214	0/0:22,0:22:66.21:0,66,3117	0/0:20,0:20:60.19:0,60,2628	0/0:22,0:22:66.21:0,66,3064	1/1:1,32:33:87.30:2831,87,0	0/0:26,0:26:78.27:0,78,3769	0/0:30,0:30:90.31:0,90,4418	0/0:28,0:28:81.28:0,81,4002	0/0:20,0:20:57.20:0,57,2796	0/0:25,0:25:75.26:0,75,3486	0/0:23,0:23:69.24:0,69,3250	0/0:14,0:14:42.14:0,42,1896	0/0:22,0:22:63.22:0,63,3118	0/0:28,0:28:84.29:0,84,4137	0/0:19,0:19:57.20:0,57,2760	0/0:37,0:37:99:0,111,5256	0/0:29,0:29:87.28:0,87,4077	0/0:10,0:10:30.05:0,30,1135
chr10	50043449	.	A	AGTGT	816.05	PASS	AB=1.000;AC=25;AF=0.521;AN=48;BaseQRankSum=-0.985;DP=495;FS=2.533;HRun=0;HaplotypeScore=91.8741;InbreedingCoeff=0.3555;MQ=66.30;MQ0=19;MQRankSum=-0.420;QD=3.03;ReadPosRankSum=-0.679;VQSLOD=1.4132;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:25:5.88:0,6,43	./.	./.	./.	0/0:19,0:19:3:0,3,44	1/1:21,0:21:18.02:233,18,0	0/1:17,0:17:0:0,0,0	1/1:28,0:27:0.47:1,0,0	0/1:12,0:12:36.83:38,0,37	1/1:15,0:15:15.90:225,16,0	./.	1/1:15,3:16:4.57:74,5,0	1/1:13,0:13:9.35:94,9,0	0/0:10,0:10:2.96:0,3,20	1/1:11,0:11:2.98:22,3,0	0/0:2,0:5:9:0,9,80	0/0:31,0:32:14.79:0,15,184	0/1:20,0:21:40.74:41,0,117	0/1:14,0:14:0.08:0,0,0	0/0:8,0:8:3.01:0,3,46	1/1:35,0:33:5.90:38,6,0	1/1:7,0:7:3:25,3,0	1/1:7,0:7:6:65,6,0	1/1:21,8:35:8.13:90,8,0	0/0:7,0:8:5.88:0,6,43	0/1:14,0:14:16.90:17,0,22	0/0:7,0:7:5.90:0,6,67	0/0:9,0:9:2.05:0,2,45
chr10	50045977	.	TTTTATATATATATATATATATATATATATATATATATA	T	5124.23	PASS	AB=1.000;AC=31;AF=0.554;AN=56;BaseQRankSum=1.433;DP=180;FS=12.543;HRun=0;HaplotypeScore=148.7645;InbreedingCoeff=0.5669;MQ=65.43;MQ0=0;MQRankSum=-2.324;QD=48.80;ReadPosRankSum=0.806;VQSLOD=3.3920;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:4:8.43:70,8,0	0/1:3,0:3:15.91:16,0,115	0/0:6,0:5:9.02:0,9,99	0/0:7,0:3:5.98:0,6,56	0/0:4,0:4:12.02:0,12,201	1/1:3,0:3:2.99:24,3,0	0/1:5,0:5:61.79:62,0,88	1/1:16,0:16:44.94:828,45,0	1/1:1,0:1:2.99:24,3,0	0/0:7,0:7:21.04:0,21,622	0/0:4,0:4:12:0,12,107	0/1:5,0:5:54.06:63,0,54	1/1:5,0:5:14.97:123,15,0	0/0:3,0:3:9.02:0,9,121	1/1:5,0:5:11.98:98,12,0	1/1:2,0:2:5.99:50,6,0	0/0:17,0:17:48.08:0,48,3814	0/0:13,0:13:36.11:0,36,3066	1/1:2,8:10:27:731,27,0	1/1:10,0:10:30.02:472,30,0	1/1:3,0:3:6:115,6,0	1/1:4,0:4:5.99:50,6,0	1/1:1,0:1:3:25,3,0	1/1:2,0:1:2.99:24,3,0	0/0:7,0:7:21.05:0,21,498	0/0:6,0:6:18.03:0,18,217	1/1:1,25:26:24.08:2351,24,0	0/0:1,0:1:3.01:0,3,297
chr10	50046015	.	A	AT	1172.80	PASS	AC=10;AF=0.294;AN=34;BaseQRankSum=4.435;DP=150;FS=0.846;HRun=1;HaplotypeScore=75.3813;InbreedingCoeff=0.5890;MQ=66.61;MQ0=7;MQRankSum=-5.540;QD=17.00;ReadPosRankSum=-1.119;VQSLOD=3.4469;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:2,0:2:3.01:0,3,38	./.	0/0:11,0:2:3.48:0,3,34	0/0:28,0:6:7.97:0,8,54	./.	0/0:1,0:1:3.01:0,3,38	0/0:1,0:1:3.01:0,3,38	1/1:8,6:14:42.07:464,42,0	./.	0/0:2,0:2:6.02:0,6,76	./.	0/0:1,0:1:3.01:0,3,38	./.	./.	0/0:2,0:2:6.02:0,6,76	./.	0/0:13,0:13:32.08:0,32,337	0/0:13,0:13:34.55:0,35,394	1/1:15,0:15:26.65:286,27,0	1/1:4,0:4:12.04:151,12,0	1/1:2,0:2:3.01:36,3,0	./.	./.	./.	0/0:1,0:1:3.01:0,3,38	./.	1/1:34,0:33:28.64:366,29,0	0/0:3,0:1:3.01:0,3,39
chr10	50047215	.	G	GTA	2020.71	PASS	AC=18;AF=0.333;AN=54;BaseQRankSum=-8.282;DP=424;FS=1.236;HRun=0;HaplotypeScore=58.3820;InbreedingCoeff=0.9138;MQ=72.23;MQ0=0;MQRankSum=0.662;QD=25.58;ReadPosRankSum=3.244;VQSLOD=4.4759;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:51.14:0,51,634	1/1:2,0:4:7.08:38,7,0	0/0:9,0:7:11.78:0,12,117	0/0:23,0:11:19.09:0,19,166	0/0:35,0:35:93.28:0,93,1181	1/1:3,17:20:39.13:658,39,0	1/1:0,4:4:9.03:152,9,0	0/0:51,0:51:99:0,120,1517	1/1:0,8:8:21.07:354,21,0	0/0:21,0:21:48.13:0,48,590	0/0:15,0:15:33.11:0,33,424	1/1:3,5:8:12.04:202,12,0	1/1:0,10:10:27.09:455,27,0	0/0:13,0:13:33.09:0,33,410	1/1:3,1:8:6:53,6,0	0/0:12,0:12:30.10:0,30,385	0/0:10,0:10:27.07:0,27,333	0/0:15,0:15:39.12:0,39,498	0/0:17,0:17:33.09:0,33,401	0/0:18,0:18:39.11:0,39,487	0/0:11,0:11:21.07:0,21,269	./.	1/1:3,11:14:15.04:253,15,0	1/1:0,2:3:3.01:51,3,0	0/0:26,0:26:54.16:0,54,680	0/0:18,0:18:48.15:0,48,605	0/0:23,0:23:60.18:0,60,757	0/0:6,0:6:18.06:0,18,231
chr10	50048133	.	CG	C	6813.75	PASS	AC=20;AF=0.385;AN=52;BaseQRankSum=9.615;DP=592;FS=3.267;HRun=4;HaplotypeScore=121.4356;InbreedingCoeff=0.9996;MQ=75.32;MQ0=0;MQRankSum=-3.024;QD=31.40;ReadPosRankSum=3.102;VQSLOD=4.0631;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	1/1:1,8:9:24.07:288,24,0	0/0:15,0:15:42.14:0,42,567	0/0:16,0:16:48.05:0,48,583	0/0:23,0:23:63.13:0,63,824	1/1:0,13:13:35.99:396,36,0	1/1:1,31:32:84.26:1007,84,0	0/0:20,0:20:54.18:0,54,749	1/1:0,17:17:48.09:558,48,0	0/0:34,0:34:96.31:0,96,1323	0/0:18,0:18:42.11:0,42,558	1/1:1,29:30:81.20:953,81,0	1/1:0,28:28:75.18:882,75,0	0/0:16,0:16:45.11:0,45,607	1/1:1,31:32:90.14:1042,90,0	./.	0/0:35,0:35:99:0,99,1377	0/0:28,0:28:81.27:0,81,1133	0/0:24,0:24:66.18:0,66,889	0/0:14,0:14:39.13:0,39,543	0/0:50,0:50:99:0,135,1773	1/1:1,22:23:57.17:683,57,0	1/1:0,14:14:36.11:431,36,0	1/1:0,19:19:48.15:575,48,0	0/0:26,0:26:75.23:0,75,1012	0/0:21,0:21:60.20:0,60,839	0/0:24,0:24:72.23:0,72,984	0/0:11,0:11:33.11:0,33,461
chr10	50049759	.	CTGTG	C	7430.68	PASS	AB=0.885;AC=28;AF=0.538;AN=52;BaseQRankSum=10.367;DP=634;FS=8.461;HRun=0;HaplotypeScore=181.6286;InbreedingCoeff=0.7809;MQ=55.13;MQ0=21;MQRankSum=-0.875;QD=20.70;ReadPosRankSum=3.544;VQSLOD=3.6330;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	1/1:9,4:13:8.09:357,8,0	0/0:24,0:18:42.12:0,42,801	0/0:29,0:17:42.11:0,42,727	0/0:29,0:28:42.13:0,42,953	0/1:23,6:28:20.75:584,0,21	1/1:21,3:24:18.60:395,19,0	1/1:10,26:31:21.33:1054,21,0	1/1:25,4:29:37.72:792,38,0	0/0:36,0:33:88.02:0,88,1621	0/0:21,0:22:42.30:0,42,814	1/1:15,6:21:20.50:520,20,0	1/1:18,7:22:29.34:486,29,0	0/0:22,0:20:50.65:0,51,1063	1/1:13,8:19:18.17:548,18,0	./.	0/0:23,0:22:45.13:0,45,872	0/0:27,0:27:74.41:0,74,1238	1/1:16,3:16:21.96:591,22,0	1/1:10,2:12:24.05:360,24,0	0/1:46,3:46:84.76:644,0,85	1/1:3,7:10:3:47,3,0	1/1:11,5:16:24.44:309,24,0	1/1:35,0:35:3.40:440,3,0	0/0:23,0:23:48.06:0,48,938	0/0:24,0:24:66.15:0,66,1224	1/1:12,8:18:20.84:303,21,0	0/0:13,0:12:30.10:0,30,571
chr10	50049761	.	GTGTGTGTC	G	5277.29	PASS	AB=1.000;AC=26;AF=0.500;AN=52;BaseQRankSum=13.414;DP=640;FS=8.504;HRun=0;HaplotypeScore=230.3776;InbreedingCoeff=0.6658;MQ=54.12;MQ0=22;MQRankSum=-1.864;QD=14.50;ReadPosRankSum=2.814;VQSLOD=2.8274;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/1:11,0:11:5.92:260,0,6	0/0:23,0:17:35.96:0,36,359	0/0:29,0:17:29.12:0,29,298	0/0:29,0:28:42.08:0,42,1243	0/1:30,0:29:5.82:285,0,6	0/1:26,0:26:5.55:219,0,6	1/1:35,0:30:1.76:419,2,0	1/1:28,0:28:58.29:546,58,0	0/0:37,0:34:90.04:0,90,1956	0/0:22,0:22:39.52:0,40,937	1/1:23,0:23:13.54:391,14,0	1/1:22,0:20:38.51:455,39,0	0/0:23,0:21:54.09:0,54,1488	1/1:23,0:21:9.12:493,9,0	./.	0/0:23,0:22:50.76:0,51,1250	0/0:27,0:27:59.33:0,59,1452	1/1:19,0:16:33.48:474,33,0	1/1:12,0:12:23.90:278,24,0	0/1:50,0:46:33.69:404,0,34	1/1:11,0:11:3.01:59,3,0	1/1:17,0:17:21.20:218,21,0	1/1:36,0:36:11.27:295,11,0	0/0:24,0:24:48.05:0,48,1330	0/0:24,0:24:62.79:0,63,1495	1/1:10,10:18:23.94:481,24,0	0/0:12,0:11:30.06:0,30,836
chr10	50049769	.	CTGTGTG	C	1973.76	PASS	AB=0.876;AC=20;AF=0.417;AN=48;BaseQRankSum=9.846;DP=642;FS=9.576;HRun=0;HaplotypeScore=220.3358;InbreedingCoeff=0.3490;MQ=48.49;MQ0=26;MQRankSum=-3.478;QD=6.00;ReadPosRankSum=1.203;VQSLOD=1.2849;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/1:7,2:10:24.10:140,0,24	./.	./.	0/0:29,0:29:12.12:0,12,853	0/1:26,4:29:64.71:95,0,65	0/1:22,2:25:6.40:85,0,6	0/0:40,0:35:19.21:0,19,162	1/1:22,4:26:25.79:269,26,0	0/0:37,0:34:53.39:0,53,1391	0/0:23,0:23:27.48:0,27,682	1/1:18,5:23:3.35:223,3,0	1/1:17,7:20:23.96:314,24,0	0/0:23,0:22:40.41:0,40,1146	0/1:20,7:26:4.09:355,0,4	./.	0/0:20,0:22:39.12:0,39,1004	0/0:22,0:24:41.58:0,42,988	0/1:18,0:18:17.06:89,0,17	0/1:12,0:14:10.35:46,0,10	0/1:46,1:45:2.67:3,0,224	1/1:7,2:9:3:54,3,0	1/1:8,4:14:9.03:119,9,0	0/1:37,0:37:2.45:172,0,2	0/0:24,0:25:48.16:0,48,1120	0/0:26,0:24:51.16:0,51,1223	1/1:11,0:17:15.50:176,16,0	0/0:11,0:12:30.10:0,30,702
chr10	50052196	.	A	AACACTGTGGGACACTGTGGG	4892.57	PASS	AB=0.971;AC=11;AF=0.212;AN=52;BaseQRankSum=-3.834;DP=682;FS=7.157;HRun=0;HaplotypeScore=461.7163;InbreedingCoeff=0.8171;MQ=87.14;MQ0=1;MQRankSum=0.192;QD=25.22;ReadPosRankSum=-7.674;VQSLOD=0.5793;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:12,0:12:18.53:0,19,737	0/0:34,0:32:5.12:0,5,80	0/1:66,0:58:99:102,0,205	0/0:20,0:20:36.18:0,36,1847	0/0:18,0:18:20.43:0,20,605	0/0:19,0:19:32.47:0,32,897	1/1:30,0:30:49.97:1595,50,0	0/0:28,0:28:52.62:0,53,1572	0/0:31,0:31:60.20:0,60,2763	0/0:16,0:16:23.18:0,23,1026	0/0:24,0:25:36.66:0,37,1073	0/0:36,0:36:67.25:0,67,2240	0/0:27,0:27:57.16:0,57,2755	0/0:33,0:33:43.55:0,44,1302	./.	0/0:34,0:34:63.21:0,63,2717	0/0:27,0:27:54.19:0,54,2588	1/1:28,0:28:34.90:1202,35,0	1/1:9,5:16:9.03:404,9,0	1/1:27,0:27:8.96:237,9,0	0/0:23,0:23:19.31:0,19,577	0/0:17,0:17:12.04:0,12,392	0/0:28,0:28:18.91:0,19,487	0/0:22,0:22:36.12:0,36,1883	0/0:31,0:31:72.24:0,72,3201	1/1:25,0:25:39.02:1353,39,0	0/0:7,0:7:15.05:0,15,572
chr10	50052201	.	TGTGGG	T	4003.42	PASS	AB=0.634;AC=10;AF=0.192;AN=52;BaseQRankSum=14.078;DP=682;FS=7.088;HRun=0;HaplotypeScore=241.5451;InbreedingCoeff=-0.2382;MQ=89.79;MQ0=1;MQRankSum=-13.994;QD=17.56;ReadPosRankSum=7.008;VQSLOD=1.9105;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/1:4,8:12:51.61:244,0,52	0/0:34,0:33:65.28:0,65,1787	0/0:71,0:61:99:0,119,2459	0/0:20,0:20:57.18:0,57,1657	0/1:9,9:18:99:290,0,271	0/1:8,11:19:99:396,0,132	0/0:34,0:34:99:0,99,2910	0/1:7,20:27:99:657,0,126	0/0:34,0:34:99:0,99,2965	0/0:16,0:16:45.15:0,45,1348	0/1:11,12:24:99:464,0,389	0/1:11,24:35:99:821,0,376	0/0:26,0:26:78.27:0,78,2396	0/1:15,17:32:99:483,0,423	./.	0/0:33,0:33:99:0,99,2966	0/0:29,0:29:87.30:0,87,2709	0/0:27,0:27:81.28:0,81,2260	0/0:14,0:14:30.10:0,30,875	0/0:29,0:29:55.41:0,55,1332	0/1:7,11:18:99:271,0,204	0/1:9,7:16:99:178,0,337	0/1:13,14:27:99:199,0,310	0/0:22,0:22:66.23:0,66,1999	0/0:31,0:31:93.32:0,93,2911	0/0:26,0:26:66.23:0,66,1962	0/0:8,0:8:24.08:0,24,788
chr10	50052207	.	ACACTG	A	3945.38	PASS	AB=0.648;AC=10;AF=0.192;AN=52;BaseQRankSum=14.073;DP=693;FS=6.346;HRun=0;HaplotypeScore=246.7591;InbreedingCoeff=-0.2382;MQ=87.11;MQ0=1;MQRankSum=-14.604;QD=16.37;ReadPosRankSum=8.221;VQSLOD=2.0555;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/1:3,8:11:57.58:244,0,58	0/0:34,0:33:88.82:0,89,1964	0/0:67,0:58:99:0,122,2720	0/0:18,0:18:54.19:0,54,1631	0/1:9,9:18:99:268,0,266	0/1:12,11:23:99:381,0,354	0/0:36,0:36:99:0,105,3113	0/1:7,20:27:77.56:660,0,78	0/0:31,0:31:90.22:0,90,2790	0/0:15,0:15:43.38:0,43,1252	0/1:14,12:26:99:458,0,437	0/1:16,24:40:99:806,0,506	0/0:27,0:27:81.28:0,81,2470	0/1:14,17:31:99:486,0,391	./.	0/0:31,0:31:93.32:0,93,2925	0/0:32,0:32:96.33:0,96,2965	0/0:29,0:29:87.30:0,87,2433	0/0:14,0:14:30.09:0,30,849	0/0:30,0:30:51.03:0,51,1327	0/1:9,11:20:99:262,0,342	0/1:11,7:18:99:174,0,411	0/1:13,14:27:99:206,0,286	0/0:22,0:22:63.10:0,63,1945	0/0:31,0:31:93.31:0,93,2873	0/0:26,0:26:66.21:0,66,1969	0/0:8,0:8:24.08:0,24,791
chr10	50052794	.	GAA	G	785.44	PASS	AC=10;AF=0.192;AN=52;BaseQRankSum=6.218;DP=487;FS=4.539;HRun=4;HaplotypeScore=88.1500;InbreedingCoeff=0.9239;MQ=79.92;MQ0=9;MQRankSum=0.842;QD=10.47;ReadPosRankSum=0.758;VQSLOD=-0.1139;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	0/0:10,0:10:29.93:0,30,501	0/0:37,0:28:49.02:0,49,603	0/0:36,0:25:8.70:0,9,504	0/0:13,0:13:33.07:0,33,462	0/0:21,0:21:51.01:0,51,760	0/0:20,0:20:57.05:0,57,781	1/1:19,0:19:44.43:369,44,0	0/0:20,0:20:46.26:0,46,652	0/0:21,0:21:43.87:0,44,905	0/0:10,0:10:30.06:0,30,444	0/0:18,0:17:41.34:0,41,745	0/0:14,0:14:33.02:0,33,453	0/0:9,0:9:15.85:0,16,316	0/0:16,0:16:48.11:0,48,741	./.	0/0:26,0:25:72.09:0,72,1035	0/0:23,0:23:63.07:0,63,971	1/1:3,9:12:26.62:229,27,0	1/1:1,20:21:8.84:56,9,0	1/1:11,0:10:2.94:18,3,0	0/0:15,0:15:39.09:0,39,655	0/0:19,0:18:52.36:0,52,840	0/0:28,0:28:69.07:0,69,980	0/0:15,0:15:42.06:0,42,599	0/0:27,0:26:77.98:0,78,1221	1/1:12,0:12:32.88:273,33,0	0/0:14,0:12:33.09:0,33,529
chr10	50052802	.	AGAGAGAGAGAGG	A	871.07	PASS	AB=0.978;AC=15;AF=0.288;AN=52;BaseQRankSum=7.000;DP=510;FS=4.090;HRun=0;HaplotypeScore=183.6339;InbreedingCoeff=-0.1793;MQ=72.02;MQ0=19;MQRankSum=-1.667;QD=2.82;ReadPosRankSum=-1.639;VQSLOD=2.4265;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/0:11,0:11:26.97:0,27,302	0/1:33,0:24:18.62:19,0,106	0/1:34,0:23:19.10:19,0,96	0/0:13,0:12:14.95:0,15,119	0/1:17,5:22:99:128,0,246	0/1:18,0:18:10.94:11,0,170	0/1:24,0:21:20.06:239,0,20	0/1:20,0:19:32.04:32,0,131	0/1:26,0:26:1.94:2,0,326	0/0:11,0:11:3.03:0,3,168	0/1:17,1:16:99:115,0,193	0/1:17,0:17:77.15:77,0,87	0/0:9,0:9:9.82:0,10,240	0/0:14,0:13:29.06:0,29,475	./.	0/0:23,0:22:42.25:0,42,395	0/0:23,0:23:25.14:0,25,596	0/1:21,0:20:99:101,0,160	1/1:21,0:21:10.13:60,10,0	0/1:15,0:14:2.70:12,0,3	0/0:14,0:14:6.40:0,6,193	0/0:19,0:18:4.33:0,4,238	0/1:27,0:27:25.98:26,0,203	0/0:14,0:14:19.64:0,20,184	0/0:33,0:32:38.21:0,38,680	0/1:12,0:12:7.13:180,0,7	0/0:15,0:13:26.99:0,27,298
chr10	50052814	.	GGAGAGAGAGAGA	G	706.62	PASS	AB=1.000;AC=21;AF=0.438;AN=48;BaseQRankSum=3.233;DP=503;FS=20.949;HRun=0;HaplotypeScore=164.4227;InbreedingCoeff=0.6109;MQ=56.46;MQ0=26;MQRankSum=-0.391;QD=3.45;ReadPosRankSum=2.876;VQSLOD=1.2459;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/0:11,0:11:3.01:0,3,85	./.	0/0:27,0:16:0:0,0,0	./.	1/1:23,0:23:3.72:130,4,0	1/1:15,0:15:4.58:87,5,0	0/0:32,0:29:24.30:0,24,169	1/1:21,0:20:8.93:78,9,0	0/0:23,0:23:12.46:0,12,90	0/0:12,0:12:3.01:0,3,30	1/1:16,0:14:12.02:191,12,0	1/1:8,5:13:3.01:103,3,0	0/0:6,0:6:6.02:0,6,180	0/0:13,0:12:12.04:0,12,257	./.	0/0:24,0:23:14.74:0,15,192	0/0:24,0:22:19.31:0,19,341	0/0:30,0:28:27.36:0,27,266	0/1:23,0:23:0.28:0,0,6	1/1:22,0:18:0.47:1,0,0	1/1:16,0:15:5.97:60,6,0	1/1:18,0:17:3.01:51,3,0	1/1:24,1:24:14.85:154,15,0	1/1:13,0:13:1.55:4,2,0	0/0:32,0:31:20.49:0,20,414	0/0:13,0:13:5.95:0,6,55	0/0:14,0:11:6.02:0,6,76
chr10	50052865	.	GGA	G	586.26	PASS	AB=0.943;AC=15;AF=0.300;AN=50;BaseQRankSum=2.634;DP=399;FS=10.936;HRun=0;HaplotypeScore=59.6829;InbreedingCoeff=0.2854;MQ=29.98;MQ0=53;MQRankSum=-2.486;QD=3.91;ReadPosRankSum=-0.401;VQSLOD=0.4590;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/0:7,0:6:9.60:0,10,68	0/0:35,0:7:17.65:0,18,225	0/0:46,0:12:35.12:0,35,391	0/0:18,0:14:6.01:0,6,95	0/1:16,1:15:0.02:0,0,187	0/0:9,0:7:4.11:0,4,39	1/1:24,0:17:32.75:361,33,0	0/0:8,2:8:3.41:0,3,18	0/0:11,0:10:23.09:0,23,336	0/0:14,1:13:9.67:0,10,98	0/1:10,2:8:7.10:47,0,7	0/1:8,1:9:4.08:4,0,36	0/1:7,0:7:0.98:1,0,95	0/0:4,0:3:6.02:0,6,91	./.	0/0:11,1:9:9.15:0,9,79	0/0:13,0:10:13.23:0,13,191	1/1:15,0:9:9.44:85,9,0	1/1:15,0:13:3.15:12,3,0	0/0:9,11:11:0.47:0,0,2	0/1:10,0:8:34.01:34,0,133	./.	0/1:20,0:15:69.29:69,0,91	0/0:9,3:11:6.49:0,6,105	0/0:18,0:12:25.35:0,25,369	1/1:6,6:10:10.38:115,10,0	0/1:8,1:6:2.04:2,0,36
chr10	50052871	.	GGA	G	578.47	PASS	AB=0.877;AC=15;AF=0.300;AN=50;BaseQRankSum=2.299;DP=387;FS=5.350;HRun=0;HaplotypeScore=59.3572;InbreedingCoeff=0.1454;MQ=30.64;MQ0=48;MQRankSum=-1.731;QD=3.73;ReadPosRankSum=0.996;VQSLOD=1.3041;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/1:4,2:6:2.96:3,0,36	0/0:35,0:7:17.65:0,18,237	0/0:46,0:12:35.13:0,35,402	0/0:17,1:15:6:0,6,100	0/0:15,3:15:5.61:0,6,230	0/0:8,0:7:8.97:0,9,77	1/1:12,10:15:14.26:329,14,0	0/0:7,2:7:5.01:0,5,28	0/0:11,0:11:16.07:0,16,278	0/0:13,1:12:12.68:0,13,100	0/1:12,1:8:4.33:38,0,4	0/1:7,1:8:7.07:7,0,37	0/0:7,0:7:5.89:0,6,103	0/0:4,0:3:6.02:0,6,90	./.	0/1:12,1:11:53.41:53,0,73	0/0:12,0:11:15.36:0,15,140	1/1:8,3:6:1.66:66,2,0	0/1:5,10:13:0:0,0,0	0/0:18,3:12:0.47:0,0,1	0/1:10,0:7:30.04:30,0,147	./.	0/1:20,0:16:70.16:70,0,118	0/0:10,0:10:8.24:0,8,117	0/1:18,0:12:5.15:5,0,296	1/1:8,3:9:11.68:112,12,0	0/1:6,2:6:3.93:4,0,41
chr10	50054057	.	T	TCCACCACCAC	6514.20	PASS	AB=0.673;AC=3;AF=0.054;AN=56;BaseQRankSum=11.162;DP=757;FS=8.709;HRun=0;HaplotypeScore=231.2407;InbreedingCoeff=0.6440;MQ=85.58;MQ0=0;MQRankSum=-11.180;QD=88.03;ReadPosRankSum=0.040;VQSLOD=3.7096;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,16:41:69.24:3483,69,0	0/0:15,0:15:45.11:0,45,1324	0/0:27,0:27:34.63:0,35,1624	0/0:26,0:27:65.34:0,65,1577	0/0:21,0:21:63.21:0,63,1973	0/0:23,0:23:63.17:0,63,1934	0/0:31,0:31:87.27:0,87,2692	0/0:35,0:35:99:0,102,3089	0/0:25,0:25:75.23:0,75,2391	0/0:29,0:29:81.24:0,81,2415	0/0:15,0:15:42.14:0,42,1393	0/0:36,0:36:99:0,105,3350	0/0:49,0:49:99:0,147,4763	0/0:18,0:18:54.19:0,54,1799	0/0:30,0:30:81.27:0,81,2643	0/1:17,12:33:99:3031,0,120	0/0:39,0:39:99:0,117,3738	0/0:25,0:25:75.20:0,75,2343	0/0:22,0:22:63.17:0,63,1804	0/0:23,0:23:63.21:0,63,2072	0/0:31,0:31:93.30:0,93,2884	0/0:28,0:28:71.18:0,71,2330	0/0:20,0:20:60.21:0,60,2001	0/0:30,0:30:87.29:0,87,2790	0/0:20,0:20:57.19:0,57,1819	0/0:28,0:28:81.27:0,81,2455	0/0:30,0:30:87.27:0,87,2749	0/0:6,0:6:18.06:0,18,600
chr10	50054561	.	AAAAAG	A	1055.99	PASS	AB=1.000;AC=6;AF=0.107;AN=56;BaseQRankSum=6.599;DP=543;FS=13.239;HRun=0;HaplotypeScore=101.5576;InbreedingCoeff=0.7207;MQ=58.73;MQ0=15;MQRankSum=-5.479;QD=15.30;ReadPosRankSum=-1.445;VQSLOD=1.9528;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:22,17:37:64.45:984,64,0	0/0:10,0:10:27.07:0,27,665	0/1:8,0:6:1.56:2,0,145	0/0:8,0:5:13.59:0,14,175	0/0:28,0:27:44.17:0,44,1476	0/0:11,0:10:29.94:0,30,603	0/0:19,0:19:42.05:0,42,1025	0/0:27,0:26:69.12:0,69,1505	0/0:8,0:7:18.06:0,18,483	0/0:22,0:21:60.08:0,60,1339	0/0:19,0:17:48.02:0,48,921	0/0:15,0:14:32.42:0,32,796	0/0:17,0:16:44.96:0,45,937	0/1:15,0:14:0.30:0,0,569	0/0:16,0:14:35.99:0,36,795	1/1:1,6:7:9.03:185,9,0	0/0:59,0:54:99:0,138,3467	0/0:30,0:28:69.15:0,69,1713	0/0:20,0:19:50.76:0,51,827	0/0:22,0:22:57.07:0,57,1282	0/0:11,0:10:26.98:0,27,562	0/0:16,0:14:24.03:0,24,425	0/0:15,0:15:31.83:0,32,676	0/0:38,0:38:93.16:0,93,2177	0/0:15,0:15:42.11:0,42,901	0/0:16,0:16:45.12:0,45,1036	0/0:20,0:18:48.09:0,48,1056	0/0:12,0:11:27.08:0,27,719
chr10	50054746	.	C	CAGAG	418.35	PASS	AB=0.932;AC=22;AF=0.524;AN=42;BaseQRankSum=0.146;DP=537;FS=15.684;HRun=0;HaplotypeScore=107.3349;InbreedingCoeff=0.3638;MQ=66.78;MQ0=1;MQRankSum=0.689;QD=1.44;ReadPosRankSum=-2.418;VQSLOD=0.7902;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:31,0:30:2.68:11,3,0	./.	./.	0/1:24,0:13:0:0,0,0	0/0:23,0:23:3.01:0,3,46	0/0:9,0:11:6:0,6,53	0/1:10,6:16:0:0,0,0	1/1:25,0:25:0.47:1,0,0	0/0:14,0:19:8.90:0,9,84	0/0:26,0:26:2.05:0,2,28	./.	1/1:15,0:22:2.74:12,3,0	1/1:14,0:14:10.19:69,10,0	./.	0/0:16,0:16:3.48:0,3,46	1/1:19,0:19:6.02:92,6,0	0/1:32,0:32:11.28:11,0,228	0/1:17,0:17:27.96:144,0,28	./.	0/0:16,0:17:6.01:0,6,56	./.	1/1:24,0:24:2.99:24,3,0	1/1:21,0:21:9.02:108,9,0	1/1:12,7:19:3.01:70,3,0	0/0:14,0:14:9.03:0,9,136	1/1:25,0:25:2.29:6,2,0	0/0:17,0:24:15.02:0,15,140	./.
chr10	50055221	.	AT	A	1023.19	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.671;DP=538;FS=15.025;HRun=10;HaplotypeScore=56.6440;InbreedingCoeff=0.9938;MQ=77.41;MQ0=0;MQRankSum=-1.028;QD=19.31;ReadPosRankSum=0.915;VQSLOD=3.0316;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,31:34:61.83:754,62,0	0/0:9,0:10:29.91:0,30,313	0/0:17,0:13:26.96:0,27,256	0/0:22,1:21:38.13:0,38,400	0/0:22,0:22:54.12:0,54,575	0/0:30,0:30:81.22:0,81,896	0/0:12,0:12:27.07:0,27,299	0/0:31,0:31:78.19:0,78,851	0/0:15,0:15:36.08:0,36,389	0/0:17,0:18:41.95:0,42,446	0/0:20,0:20:48.11:0,48,517	0/0:15,0:15:42.09:0,42,450	0/0:14,0:14:36.10:0,36,398	0/0:12,0:12:30.08:0,30,331	0/0:19,0:19:54.15:0,54,597	1/1:4,15:19:44.99:391,45,0	0/0:20,0:20:57.15:0,57,630	0/0:12,0:12:33.09:0,33,365	0/0:27,0:27:72.14:0,72,767	0/0:20,0:20:57.13:0,57,615	0/0:17,0:17:45.11:0,45,490	0/0:18,0:18:51.14:0,51,564	0/0:17,0:17:45.12:0,45,498	0/0:19,0:19:41.18:0,41,512	0/0:24,0:24:60.16:0,60,659	0/0:17,0:17:45.12:0,45,498	0/0:30,0:30:81.22:0,81,895	0/0:6,0:6:18.03:0,18,188
chr10	50057110	.	GAA	G	3517.23	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=10.400;DP=624;FS=5.372;HRun=12;HaplotypeScore=74.9521;InbreedingCoeff=0.9538;MQ=66.83;MQ0=0;MQRankSum=0.631;QD=20.33;ReadPosRankSum=0.903;VQSLOD=3.1590;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,17:19:48.10:488,48,0	0/0:7,0:7:15.03:0,15,186	0/0:8,0:8:8.51:0,9,90	0/0:4,0:4:2.68:0,3,11	0/0:22,0:27:70.60:0,71,797	0/0:21,0:21:48.14:0,48,662	0/0:24,0:24:63.20:0,63,905	1/1:10,28:38:78.68:824,79,0	0/0:25,0:27:60.15:0,60,803	0/0:27,0:31:86.24:0,86,1157	0/0:19,0:20:50.58:0,51,659	0/0:17,0:19:47.11:0,47,607	0/0:25,0:28:60.17:0,60,840	0/0:13,0:16:42.12:0,42,576	0/0:20,0:25:63.19:0,63,873	1/1:6,14:21:20.75:266,21,0	0/0:28,0:30:78.20:0,78,1092	0/0:17,0:18:51.12:0,51,702	1/1:8,12:20:36:352,36,0	1/1:6,30:36:77.99:780,78,0	1/1:4,10:15:26.78:321,27,0	0/0:29,0:29:72.17:0,72,977	0/0:23,0:24:39.11:0,39,530	0/0:23,0:26:65.16:0,65,857	0/0:18,0:19:44.60:0,45,550	0/0:35,0:37:71.67:0,72,968	1/1:7,17:24:46.81:486,47,0	0/0:10,0:11:29.95:0,30,358
chr10	50058006	.	A	AT	1639.83	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-8.912;DP=624;FS=0.000;HRun=1;HaplotypeScore=60.0502;InbreedingCoeff=0.9432;MQ=81.62;MQ0=0;MQRankSum=-3.254;QD=30.94;ReadPosRankSum=2.139;VQSLOD=3.2836;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,31:32:78.26:1163,78,0	0/0:8,0:8:24.06:0,24,285	0/0:24,0:25:50.23:0,50,601	0/0:15,0:14:24.03:0,24,280	0/0:33,0:33:99:0,99,1201	0/0:26,0:26:78.20:0,78,942	0/0:16,0:16:45.14:0,45,570	0/0:34,0:33:96.21:0,96,1160	0/0:22,0:22:60.17:0,60,749	0/0:29,0:29:78.20:0,78,959	0/0:29,0:29:84.24:0,84,1048	0/0:26,0:26:75.20:0,75,917	0/0:16,0:16:45.09:0,45,541	0/0:21,0:21:63.20:0,63,803	0/0:24,0:24:60.17:0,60,751	1/1:1,20:21:6.38:589,6,0	0/0:18,0:18:54.14:0,54,658	0/0:19,0:19:54.02:0,54,652	0/0:20,0:20:57.13:0,57,696	0/0:26,0:26:78.14:0,78,930	0/0:15,0:15:45.11:0,45,542	0/0:17,0:17:51.14:0,51,634	0/0:23,0:23:65.58:0,66,823	0/0:27,0:27:81.21:0,81,990	0/0:23,0:23:63.18:0,63,788	0/0:27,0:27:75.21:0,75,930	0/0:24,0:24:72.21:0,72,902	0/0:8,0:8:21.07:0,21,271
chr10	50059246	.	CGGAG	C	3524.40	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=10.782;DP=807;FS=0.000;HRun=0;HaplotypeScore=130.4880;InbreedingCoeff=0.9948;MQ=86.18;MQ0=0;MQRankSum=-3.040;QD=45.18;ReadPosRankSum=3.660;VQSLOD=4.3645;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,33:38:78.27:1455,78,0	0/0:6,0:6:18.06:0,18,480	0/0:35,0:35:99:0,99,2596	0/0:21,0:21:60.21:0,60,1540	0/0:31,0:31:78.27:0,78,2076	0/0:31,0:31:90.31:0,90,2398	0/0:32,0:32:90.31:0,90,2401	0/0:34,0:34:90.31:0,90,2328	0/0:25,0:25:66.23:0,66,1708	0/0:36,0:35:96.29:0,96,2451	0/0:24,0:24:72.24:0,72,1866	0/0:34,0:34:99:0,99,2570	0/0:34,0:34:96.33:0,96,2505	0/0:28,0:28:78.27:0,78,2040	0/0:35,0:35:96.25:0,96,2535	1/1:3,37:40:99:2069,111,0	0/0:17,0:17:48.16:0,48,1279	0/0:21,0:21:57.20:0,57,1518	0/0:18,0:18:42.14:0,42,1118	0/0:40,0:40:99:0,114,2980	0/0:38,0:38:99:0,99,2640	0/0:30,0:30:87.28:0,87,2254	0/0:35,0:35:99:0,102,2702	0/0:27,0:27:75.26:0,75,1939	0/0:24,0:24:72.25:0,72,1893	0/0:32,0:32:93.32:0,93,2438	0/0:29,0:28:81.25:0,81,2135	0/0:12,0:12:24.08:0,24,640
chr10	50064865	.	TCA	T	630.56	PASS	AB=0.947;AC=23;AF=0.479;AN=48;BaseQRankSum=1.646;DP=596;FS=5.394;HRun=0;HaplotypeScore=93.6533;InbreedingCoeff=0.6578;MQ=71.69;MQ0=6;MQRankSum=-0.667;QD=2.80;ReadPosRankSum=2.277;VQSLOD=1.4515;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:12.01:0,12,129	1/1:4,1:5:5.83:38,6,0	./.	./.	0/0:23,0:23:9.01:0,9,93	0/0:13,0:13:9.03:0,9,122	1/1:14,2:16:3:32,3,0	./.	0/0:21,0:20:14.96:0,15,186	0/0:15,0:15:11.93:0,12,117	0/0:14,0:14:10.62:0,11,66	1/1:16,7:23:15.03:161,15,0	1/1:8,5:13:8.85:96,9,0	0/0:5,0:15:2.96:0,3,23	1/1:15,0:17:2.84:14,3,0	0/1:17,1:18:17.11:17,0,159	0/0:19,0:27:20.92:0,21,183	0/0:9,0:16:13.53:0,14,103	1/1:9,0:12:2.84:14,3,0	1/1:19,0:28:14.20:70,14,0	./.	1/1:19,3:23:9.32:79,9,0	1/1:14,1:16:5.85:46,6,0	1/1:26,6:32:22.92:211,23,0	0/0:23,0:23:26.35:0,26,246	0/0:20,0:20:23.80:0,24,218	1/1:17,0:21:5.57:28,6,0	0/0:2,0:2:2.97:0,3,20
chr10	50066135	.	CCACCTGTGTGTGGAA	C	6508.72	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=11.279;DP=729;FS=28.990;HRun=0;HaplotypeScore=292.6690;InbreedingCoeff=0.9989;MQ=86.25;MQ0=0;MQRankSum=-11.473;QD=114.19;ReadPosRankSum=2.050;VQSLOD=3.6263;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,37:37:84.76:3855,85,0	0/0:13,0:13:39.13:0,39,2926	0/0:25,0:25:72.25:0,72,3816	0/0:25,0:25:69.24:0,69,4198	0/0:22,0:22:66.23:0,66,4648	0/0:17,0:17:51.18:0,51,3541	0/0:42,0:42:99:0,123,7957	0/0:27,0:27:81.27:0,81,5647	0/0:35,0:35:99:0,102,7215	0/0:24,0:24:72.25:0,72,5124	0/0:21,0:21:63.20:0,63,3912	0/0:33,0:33:99:0,99,6727	0/0:27,0:27:81.28:0,81,6175	0/0:26,0:26:78.27:0,78,5906	0/0:38,0:38:99:0,114,7643	1/1:0,20:20:57.20:2654,57,0	0/0:32,0:32:96.32:0,96,6865	0/0:26,0:26:78.27:0,78,5323	0/0:19,0:19:57.20:0,57,3494	0/0:17,0:17:51.18:0,51,3776	0/0:42,0:42:99:0,123,8324	0/0:19,0:19:57.20:0,57,3566	0/0:20,0:20:60.21:0,60,4363	0/0:41,0:41:99:0,123,8411	0/0:26,0:26:78.23:0,78,4785	0/0:26,0:26:78.27:0,78,5759	0/0:21,0:21:63.22:0,63,4253	0/0:8,0:8:24.08:0,24,1801
chr10	50068148	.	ATC	A	1001.01	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.514;DP=421;FS=5.239;HRun=0;HaplotypeScore=53.5621;InbreedingCoeff=0.9266;MQ=63.79;MQ0=0;MQRankSum=-2.682;QD=33.37;ReadPosRankSum=-0.483;VQSLOD=4.7375;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,17:20:45.14:664,45,0	0/0:9,0:9:27.09:0,27,520	0/0:20,0:16:45.15:0,45,860	0/0:17,0:15:43.94:0,44,729	0/0:6,0:6:18.06:0,18,348	0/0:20,0:20:51.17:0,51,976	0/0:31,0:31:93.32:0,93,1796	0/0:28,0:28:81.26:0,81,1487	0/0:22,0:22:63.20:0,63,1184	0/0:13,0:13:39.13:0,39,736	0/0:7,0:7:18.06:0,18,344	0/0:17,0:17:51.17:0,51,980	0/0:16,0:16:48.15:0,48,876	0/0:7,0:7:21.07:0,21,404	0/0:23,0:23:69.24:0,69,1332	1/1:0,10:10:30.10:458,30,0	0/0:11,0:11:33.09:0,33,601	0/0:23,0:23:66.23:0,66,1274	0/0:16,0:16:48.16:0,48,923	0/0:5,0:5:15.05:0,15,290	0/0:31,0:31:87.30:0,87,1671	0/0:14,0:14:36.12:0,36,695	0/0:6,0:6:18.06:0,18,348	0/0:9,0:9:27.09:0,27,521	0/0:12,0:12:33.10:0,33,604	0/0:12,0:12:36.12:0,36,691	0/0:14,0:14:42.14:0,42,788	0/0:2,0:2:6.02:0,6,104
chr10	50068156	.	T	TCC	523.09	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.443;DP=429;FS=3.168;HRun=8;HaplotypeScore=63.0979;InbreedingCoeff=0.8617;MQ=67.15;MQ0=1;MQRankSum=-3.593;QD=13.08;ReadPosRankSum=-1.930;VQSLOD=0.1962;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:12,13:26:36.91:495,37,0	0/0:10,0:10:27.06:0,27,292	0/0:17,0:17:23.88:0,24,260	0/0:17,0:14:9.51:0,10,171	0/0:6,0:6:18.02:0,18,182	0/0:19,0:19:57.11:0,57,622	0/0:32,0:32:72.17:0,72,802	0/0:25,0:25:54.12:0,54,595	0/0:20,0:20:57.13:0,57,626	0/0:12,0:12:36.10:0,36,400	0/0:8,0:8:21.06:0,21,234	0/0:18,0:18:51.12:0,51,559	0/0:18,0:18:51.13:0,51,565	0/0:7,0:7:21.06:0,21,234	0/0:24,0:24:57.12:0,57,635	1/1:11,0:13:15.03:146,15,0	0/0:12,0:12:30.07:0,30,334	0/0:23,0:23:51.54:0,52,556	0/0:18,0:18:48.08:0,48,503	0/0:6,0:6:15.03:0,15,167	0/0:32,0:32:84.21:0,84,922	0/0:14,0:14:27.07:0,27,301	0/0:5,0:5:15.04:0,15,166	0/0:9,0:9:24.06:0,24,268	0/0:12,0:12:27.06:0,27,301	0/0:10,0:10:27.06:0,27,294	0/0:14,0:14:42.11:0,42,468	0/0:1,0:1:3.01:0,3,33
chr10	50072266	.	CTT	C	1274.90	PASS	AB=0.550;AC=3;AF=0.054;AN=56;BaseQRankSum=7.846;DP=602;FS=1.213;HRun=10;HaplotypeScore=74.9405;InbreedingCoeff=0.5380;MQ=78.48;MQ0=1;MQRankSum=0.232;QD=24.52;ReadPosRankSum=2.200;VQSLOD=3.5200;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,35:41:99:1171,105,0	0/0:11,0:11:24.07:0,24,360	0/0:22,0:21:2.29:0,2,268	0/0:12,0:12:9.41:0,9,137	0/0:27,0:27:72.25:0,72,1142	0/0:27,0:29:83.26:0,83,1255	0/0:17,0:17:51.17:0,51,798	0/0:28,1:29:35.98:0,36,961	0/0:26,0:27:69.22:0,69,1049	0/0:25,0:27:69.23:0,69,1073	0/0:20,0:20:57.19:0,57,902	0/0:22,0:22:63.17:0,63,969	0/0:13,0:13:36.08:0,36,543	0/0:20,0:21:59.61:0,60,812	0/0:20,0:21:53.64:0,54,772	0/1:2,9:11:23.56:210,0,24	0/0:28,0:28:71.72:0,72,1082	0/0:16,0:16:48.15:0,48,731	0/0:20,0:20:51.16:0,51,785	0/0:25,0:25:63.19:0,63,955	0/0:16,0:16:48.15:0,48,740	0/0:17,0:17:48.16:0,48,752	0/0:21,0:22:59.68:0,60,890	0/0:20,0:20:60.20:0,60,950	0/0:22,0:23:54.18:0,54,838	0/0:30,0:30:87.28:0,87,1358	0/0:29,0:29:84.27:0,84,1295	0/0:4,0:4:12.04:0,12,188
chr10	50073719	.	C	CA	8646.35	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-6.878;DP=653;FS=33.920;HRun=0;HaplotypeScore=62.4592;InbreedingCoeff=0.9809;MQ=82.38;MQ0=0;MQRankSum=-2.353;QD=42.80;ReadPosRankSum=-0.507;VQSLOD=2.3903;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,46:46:99:1918,120,0	0/0:9,0:9:27.09:0,27,377	0/0:14,0:14:42.14:0,42,587	0/0:21,0:21:57.19:0,57,792	0/0:28,0:28:84.28:0,84,1173	0/0:26,0:26:78.26:0,78,1090	0/0:22,0:22:66.19:0,66,888	1/1:0,16:16:48.16:761,48,0	0/0:29,0:29:87.28:0,87,1194	0/0:28,0:28:84.20:0,84,1115	0/0:14,0:14:39.13:0,39,541	0/0:25,0:25:66.22:0,66,918	0/0:25,0:25:66.22:0,66,920	0/0:26,0:26:75.25:0,75,1048	0/0:23,0:23:69.23:0,69,963	1/1:0,22:22:63.21:1007,63,0	0/0:34,0:34:99:0,99,1376	0/0:20,0:20:57.18:0,57,780	1/1:0,14:14:42.14:672,42,0	1/1:2,28:30:75.21:1170,75,0	1/1:1,47:48:99:1967,123,0	0/0:21,0:21:63.21:0,63,881	0/0:17,0:17:51.17:0,51,713	0/0:30,0:30:90.30:0,90,1257	0/0:16,0:16:48.12:0,48,649	0/0:21,0:21:63.21:0,63,881	1/1:0,26:26:72.25:1150,72,0	0/0:2,0:2:6.02:0,6,84
chr10	50074564	.	G	GA	1727.75	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-10.458;DP=733;FS=11.526;HRun=8;HaplotypeScore=71.7239;InbreedingCoeff=0.9619;MQ=74.22;MQ0=0;MQRankSum=-4.293;QD=25.79;ReadPosRankSum=1.814;VQSLOD=3.8842;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,34:43:47.37:1053,47,0	0/0:9,0:9:23.99:0,24,215	0/0:18,0:19:29.80:0,30,259	0/0:12,0:14:21.59:0,22,174	0/0:32,0:32:84.04:0,84,769	0/0:28,0:28:75.02:0,75,686	0/0:34,0:34:84.02:0,84,764	0/0:27,0:27:68.99:0,69,616	0/0:22,0:22:60.03:0,60,549	0/0:23,0:23:33.67:0,34,495	0/0:21,0:21:53.98:0,54,486	0/0:27,0:27:78.03:0,78,709	0/0:31,0:31:87.04:0,87,796	0/0:33,0:33:93.02:0,93,845	0/0:27,0:27:81.04:0,81,741	1/1:0,24:24:69.20:796,69,0	0/0:33,0:33:92.92:0,93,824	0/0:20,0:20:56.98:0,57,513	0/0:34,0:34:84:0,84,764	0/0:23,0:23:53.61:0,54,476	0/0:22,0:22:57.03:0,57,522	0/0:35,0:35:99:0,102,922	0/0:19,1:20:16.41:0,16,405	0/0:39,0:39:96.04:0,96,879	0/0:27,0:27:66.03:0,66,604	0/0:37,0:37:99:0,102,927	0/0:26,0:26:72.02:0,72,654	0/0:3,0:3:9:0,9,82
chr10	50077711	.	T	TAAA	5820.90	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-4.740;DP=613;FS=0.000;HRun=12;HaplotypeScore=98.6448;InbreedingCoeff=0.9346;MQ=72.92;MQ0=1;MQRankSum=0.298;QD=28.67;ReadPosRankSum=-5.272;VQSLOD=2.8055;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,25:39:66.95:1079,67,0	0/0:13,0:13:26.95:0,27,303	0/0:18,0:14:11.24:0,11,102	0/0:14,0:12:0.16:0,0,56	0/0:26,0:29:67.80:0,68,712	0/0:19,0:22:46.05:0,46,500	0/0:10,0:12:29.93:0,30,305	1/1:15,17:38:84.12:1153,84,0	0/0:18,0:18:32.95:0,33,359	0/0:28,0:31:73.41:0,73,788	0/0:20,0:23:35.79:0,36,429	0/0:16,0:16:35.96:0,36,393	0/0:21,0:21:54.03:0,54,604	0/0:25,0:25:50.94:0,51,572	0/0:17,0:18:37.54:0,38,435	1/1:7,17:26:42.09:678,42,0	0/0:25,0:27:69.06:0,69,757	0/0:20,0:20:57.13:0,57,639	1/1:8,10:25:50.98:700,51,0	1/1:11,22:36:78.14:1200,78,0	1/1:1,6:8:9.03:166,9,0	0/0:14,0:16:26.76:0,27,331	0/0:22,0:25:49.39:0,49,532	0/0:9,0:10:20.90:0,21,217	0/0:17,0:18:31.42:0,31,357	0/0:22,0:26:55.43:0,55,612	1/1:4,21:30:53.99:846,54,0	0/0:6,0:6:18.05:0,18,202
chr10	50082281	.	GA	G	1115.62	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.252;DP=658;FS=10.697;HRun=7;HaplotypeScore=90.8839;InbreedingCoeff=0.9030;MQ=70.26;MQ0=5;MQRankSum=-3.958;QD=21.87;ReadPosRankSum=0.482;VQSLOD=2.8277;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,32:33:84.10:838,84,0	0/0:13,0:12:21.07:0,21,264	0/0:27,0:26:56.99:0,57,655	0/0:28,0:25:47.82:0,48,667	0/0:28,0:28:75.23:0,75,929	0/0:27,0:27:51.16:0,51,641	0/0:24,0:23:33.06:0,33,397	0/0:26,0:26:66.19:0,66,807	0/0:15,0:14:33.09:0,33,402	0/0:19,0:19:54.16:0,54,666	0/0:19,0:19:54.16:0,54,666	0/0:30,0:27:57.17:0,57,702	0/0:23,0:23:45.10:0,45,525	0/0:26,0:26:75.21:0,75,924	0/0:24,0:24:42.13:0,42,527	1/1:4,14:18:7.36:391,7,0	0/0:32,0:32:96.25:0,96,1176	0/0:18,0:18:51.10:0,51,608	0/0:14,0:14:33.09:0,33,401	0/0:22,0:21:60.19:0,60,744	0/0:26,0:23:60.19:0,60,754	0/0:27,0:26:60.18:0,60,740	0/0:26,0:22:42.13:0,42,522	0/0:25,0:22:48.13:0,48,577	0/0:28,0:28:72.22:0,72,895	0/0:31,0:31:84.26:0,84,1040	0/0:27,0:24:60.18:0,60,740	0/0:2,0:2:6.02:0,6,75
chr10	50082296	.	T	TAGAC	3569.86	PASS	AB=0.879;AC=26;AF=0.464;AN=56;BaseQRankSum=-3.617;DP=680;FS=1.110;HRun=0;HaplotypeScore=120.7810;InbreedingCoeff=0.5217;MQ=63.92;MQ0=11;MQRankSum=3.368;QD=9.27;ReadPosRankSum=-1.016;VQSLOD=3.0201;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:11.99:0,12,139	1/1:5,6:10:6.02:143,6,0	0/0:28,0:21:8.87:0,9,82	0/0:32,0:24:17.93:0,18,205	0/1:11,0:24:19.43:19,0,21	1/1:11,14:25:15.05:353,15,0	0/1:9,15:22:0:0,0,0	1/1:15,0:29:25.43:167,25,0	1/1:7,9:16:12.04:281,12,0	0/0:24,0:24:39.12:0,39,577	0/0:19,0:19:33.10:0,33,493	1/1:13,18:28:21.07:501,21,0	1/1:9,18:27:24.08:513,24,0	0/0:25,0:25:8.02:0,8,761	1/1:10,18:30:15.05:357,15,0	0/0:11,0:13:12.04:0,12,164	0/0:40,0:40:84.12:0,84,1172	0/0:21,0:20:33.11:0,33,522	1/1:11,0:15:0.45:60,0,0	0/1:12,0:24:38.91:39,0,94	0/1:10,0:24:82.19:112,0,82	1/1:9,13:21:21.07:495,21,0	0/1:13,12:22:10.98:11,0,42	1/1:8,17:22:21.07:496,21,0	0/0:28,0:28:37.14:0,37,673	0/0:33,0:32:72.18:0,72,991	0/1:8,0:21:22.10:22,0,143	0/0:4,0:4:6:0,6,71
chr10	50082355	.	TCAGA	T	578.67	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=4.667;DP=684;FS=7.350;HRun=0;HaplotypeScore=117.4054;InbreedingCoeff=0.9602;MQ=72.56;MQ0=15;MQRankSum=-2.196;QD=13.46;ReadPosRankSum=3.256;VQSLOD=2.4561;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:0,26:24:17.75:340,18,0	0/0:4,0:4:12.04:0,12,318	0/0:26,0:15:44.78:0,45,672	0/0:60,0:32:59.39:0,59,964	0/0:17,0:16:45.13:0,45,902	0/0:29,0:29:80.86:0,81,1746	0/0:18,0:17:39.13:0,39,894	0/0:39,0:39:99:0,111,1963	0/0:19,0:19:48.15:0,48,1017	0/0:37,0:37:99:0,108,2340	0/0:19,0:19:50.13:0,50,924	0/0:19,0:16:42.13:0,42,942	0/0:23,0:22:45.07:0,45,997	0/0:26,0:26:72.14:0,72,1383	0/0:27,0:27:57.18:0,57,1337	1/1:2,15:16:21.06:357,21,0	0/0:34,0:34:90.75:0,91,2186	0/0:26,0:25:72.18:0,72,1622	0/0:10,0:9:23.10:0,23,375	0/0:26,0:26:72.11:0,72,1556	0/0:31,0:27:78.21:0,78,1724	0/0:14,0:14:37.93:0,38,844	0/0:13,0:12:24.07:0,24,485	0/0:31,0:29:71.79:0,72,1604	0/0:20,0:20:57.18:0,57,1339	0/0:30,0:30:87.23:0,87,1917	0/0:36,0:34:99:0,105,2322	0/0:4,0:4:12.04:0,12,299
chr10	50084348	.	GACAGACACACACACAC	G	4528.23	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=11.504;DP=628;FS=1.578;HRun=0;HaplotypeScore=242.1404;InbreedingCoeff=0.9497;MQ=62.70;MQ0=11;MQRankSum=-3.442;QD=38.37;ReadPosRankSum=-1.022;VQSLOD=4.1224;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:20.98:0,21,699	0/0:5,0:5:15.04:0,15,687	0/0:25,0:11:22:0,22,269	0/0:37,0:20:35.87:0,36,539	0/0:21,0:20:57.09:0,57,2921	0/0:18,0:18:39.03:0,39,1424	0/0:25,0:24:69.18:0,69,3197	1/1:3,32:34:95.60:1182,96,0	0/0:16,0:16:48.10:0,48,2200	0/0:27,0:27:77.90:0,78,3948	0/0:12,0:12:30.07:0,30,1275	0/0:24,0:24:68.17:0,68,2965	0/0:24,0:24:72.19:0,72,3681	0/0:19,0:18:50.68:0,51,2657	0/0:26,0:25:60.68:0,61,2873	0/0:30,0:30:42.60:0,43,2197	0/0:29,0:29:75.18:0,75,3945	0/0:20,0:20:51.13:0,51,2082	1/1:6,23:28:68.47:1635,68,0	1/1:0,17:17:17.99:676,18,0	1/1:2,13:15:3.01:113,3,0	0/0:18,0:18:51.16:0,51,3108	0/0:16,0:16:48.11:0,48,2389	0/0:25,0:25:66.16:0,66,3283	0/0:26,0:25:72.19:0,72,3770	0/0:26,0:24:69.10:0,69,3581	1/1:1,20:21:21.07:921,21,0	0/0:11,0:11:33.11:0,33,1745
chr10	50084352	.	GAC	G	1309.35	PASS	AB=0.933;AC=16;AF=0.296;AN=54;BaseQRankSum=7.740;DP=637;FS=5.941;HRun=0;HaplotypeScore=104.5010;InbreedingCoeff=0.5486;MQ=62.66;MQ0=11;MQRankSum=0.488;QD=6.21;ReadPosRankSum=4.528;VQSLOD=2.5061;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:35:8.06:0,8,146	1/1:6,0:6:12.03:137,12,0	./.	0/0:35,0:20:9.41:0,9,72	0/0:20,0:19:39.13:0,39,591	1/1:8,11:19:15.04:173,15,0	0/0:26,1:26:25.58:0,26,746	0/0:34,0:33:24.17:0,24,113	1/1:4,13:17:39.11:448,39,0	0/1:24,5:29:76.92:77,0,644	0/0:14,0:14:24.07:0,24,340	0/0:24,0:24:36.59:0,37,549	0/0:24,1:25:22.67:0,23,753	0/0:17,1:17:4.64:0,5,503	1/1:7,18:24:36.73:485,37,0	0/1:5,1:31:3.89:4,0,225	0/0:27,4:32:14.62:0,15,781	0/1:18,2:20:1.44:1,0,374	0/1:27,0:25:20.39:56,0,20	1/1:17,0:17:9.73:45,10,0	0/0:14,0:14:2.60:0,3,10	0/0:17,0:17:38.61:0,39,578	0/0:17,0:17:1.64:0,2,443	0/0:27,1:28:9.01:0,9,577	0/0:24,1:24:53.38:0,53,757	0/0:25,0:23:45.07:0,45,635	1/1:20,0:20:4.06:57,4,0	0/0:13,0:13:32.85:0,33,415
chr10	50084768	.	TC	T	433.80	PASS	AB=1.000;AC=12;AF=0.222;AN=54;BaseQRankSum=1.762;DP=174;FS=12.911;HRun=7;HaplotypeScore=28.7028;InbreedingCoeff=0.5208;MQ=86.67;MQ0=7;MQRankSum=2.717;QD=6.20;ReadPosRankSum=0.520;VQSLOD=-0.4263;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:3,0:3:9.03:0,9,113	./.	0/0:31,0:8:7.82:0,8,33	0/1:38,0:20:19.13:19,0,154	0/0:6,0:6:12.03:0,12,138	0/0:6,0:6:12.04:0,12,146	0/0:4,0:4:6.02:0,6,75	1/1:2,10:12:26.90:275,27,0	0/0:4,0:4:9:0,9,97	0/0:3,0:3:9.03:0,9,113	0/0:2,0:2:3.01:0,3,38	0/0:5,0:5:12:0,12,133	0/0:1,0:1:2.97:0,3,20	0/0:5,1:6:13.92:0,14,111	0/0:3,0:3:9.02:0,9,101	0/0:4,0:4:11.96:0,12,121	0/0:5,0:5:15.03:0,15,173	0/1:4,0:4:1.20:1,0,3	1/1:1,3:4:8.99:82,9,0	1/1:2,1:3:1.66:28,2,0	1/1:2,4:6:12.03:122,12,0	0/0:7,0:7:15.04:0,15,174	0/0:4,0:4:12.04:0,12,151	0/0:3,0:3:6.01:0,6,63	0/0:1,0:1:2.04:0,2,6	0/0:3,0:3:9.03:0,9,113	1/1:1,2:3:6:55,6,0	0/0:2,0:2:3.01:0,3,37
chr10	50085696	.	G	GTC	3629.72	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-12.228;DP=719;FS=0.000;HRun=0;HaplotypeScore=83.3538;InbreedingCoeff=0.9975;MQ=86.35;MQ0=0;MQRankSum=-6.112;QD=44.26;ReadPosRankSum=3.281;VQSLOD=5.3910;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,41:42:99:2035,111,0	0/0:11,0:11:33.11:0,33,473	0/0:26,0:26:61.26:0,61,746	0/0:26,0:26:58.36:0,58,750	0/0:24,0:24:69.18:0,69,931	0/0:21,0:21:57.17:0,57,798	0/0:31,0:31:90.29:0,90,1271	0/0:12,0:12:30.09:0,30,414	0/0:29,0:29:84.27:0,84,1185	0/0:31,0:31:90.28:0,90,1241	0/0:19,0:19:54.18:0,54,773	0/0:29,0:29:81.25:0,81,1139	0/0:36,0:36:99:0,99,1380	0/0:32,0:32:90.24:0,90,1228	0/0:26,0:26:75.22:0,75,1037	1/1:2,35:40:87.30:1595,87,0	0/0:16,0:16:48.16:0,48,687	0/0:16,0:16:48.16:0,48,688	0/0:12,0:12:23.97:0,24,316	0/0:28,0:28:78.24:0,78,1081	0/0:25,0:25:66.19:0,66,908	0/0:19,0:19:54.15:0,54,735	0/0:25,0:25:72.24:0,72,1027	0/0:33,0:33:96.32:0,96,1373	0/0:39,0:39:99:0,108,1491	0/0:27,0:27:78.23:0,78,1067	0/0:32,0:32:93.28:0,93,1295	0/0:12,0:12:24.06:0,24,318
chr10	50086721	.	AT	A	3505.81	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=13.226;DP=833;FS=13.654;HRun=2;HaplotypeScore=91.7581;InbreedingCoeff=0.8709;MQ=57.54;MQ0=17;MQRankSum=1.680;QD=36.14;ReadPosRankSum=1.494;VQSLOD=2.7976;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,53:53:99:1831,141,0	0/0:10,0:10:30.08:0,30,412	0/0:28,0:1:3.01:0,3,45	0/0:25,0:2:6.02:0,6,75	0/0:24,0:23:66.22:0,66,989	0/0:26,0:26:78.26:0,78,1167	0/0:26,0:26:78.23:0,78,1125	0/0:36,0:36:99:0,105,1524	0/0:28,0:28:84.28:0,84,1257	0/0:38,0:38:99:0,111,1643	0/0:25,0:25:69.21:0,69,996	0/0:42,0:41:99:0,123,1842	0/0:30,0:30:90.30:0,90,1348	0/0:34,0:34:99:0,102,1527	0/0:38,0:38:99:0,114,1706	1/1:0,44:44:99:1675,129,0	0/0:40,0:39:99:0,120,1795	0/0:30,0:30:87.17:0,87,1230	0/0:24,0:21:63.21:0,63,942	0/0:20,0:20:57.16:0,57,798	0/0:40,0:40:99:0,114,1681	0/0:30,0:30:90.30:0,90,1348	0/0:20,0:20:54.18:0,54,809	0/0:27,0:27:81.26:0,81,1191	0/0:31,0:31:93.31:0,93,1392	0/0:28,0:28:84.28:0,84,1259	0/0:28,0:27:81.24:0,81,1153	0/0:8,0:8:24.08:0,24,360
chr10	50088784	.	T	TA	5523.29	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-14.110;DP=588;FS=4.930;HRun=1;HaplotypeScore=58.6130;InbreedingCoeff=0.9967;MQ=74.11;MQ0=0;MQRankSum=-1.023;QD=35.41;ReadPosRankSum=-0.238;VQSLOD=4.6389;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,29:31:66.20:923,66,0	0/0:8,0:8:24.08:0,24,334	0/0:12,0:12:24.07:0,24,299	0/0:12,0:11:20.60:0,21,219	0/0:31,0:31:93.30:0,93,1270	0/0:34,0:34:99:0,102,1336	0/0:16,0:16:48.14:0,48,632	1/1:1,35:35:99:1329,102,0	0/0:21,0:21:63.17:0,63,814	0/0:31,0:31:93.24:0,93,1166	0/0:26,0:26:75.23:0,75,995	0/0:19,0:19:57.16:0,57,754	0/0:19,0:19:57.12:0,57,691	0/0:19,0:19:57.18:0,57,766	0/0:19,0:19:57.16:0,57,735	1/1:0,15:15:33.11:472,33,0	0/0:27,0:27:78.21:0,78,998	0/0:22,0:22:60.14:0,60,796	1/1:1,16:17:41.11:626,41,0	1/1:0,23:23:63.07:844,63,0	1/1:0,9:9:21.07:300,21,0	0/0:25,0:25:75.13:0,75,904	0/0:19,0:19:57.18:0,57,769	0/0:9,0:9:27.08:0,27,361	0/0:26,0:26:78.10:0,78,1003	0/0:29,0:29:84.25:0,84,1110	1/1:0,25:25:72.24:1029,72,0	0/0:8,0:8:21.05:0,21,275
chr10	50089522	.	AC	A	1118.77	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=0.157;DP=500;FS=9.811;HRun=1;HaplotypeScore=60.2128;InbreedingCoeff=0.9840;MQ=68.33;MQ0=1;MQRankSum=-1.999;QD=11.30;ReadPosRankSum=-2.457;VQSLOD=0.1297;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:20.72:0,21,161	0/0:6,0:6:14.91:0,15,131	0/0:26,0:12:19.51:0,20,156	0/0:11,0:8:17.81:0,18,159	0/0:33,0:33:83.63:0,84,832	0/0:22,0:22:57.81:0,58,568	0/0:20,0:20:53.96:0,54,530	1/1:25,3:28:40.83:387,41,0	0/0:7,0:7:20.96:0,21,208	0/0:19,0:19:44.08:0,44,399	0/0:19,0:19:51.86:0,52,455	0/0:19,0:20:45.93:0,46,440	0/0:16,0:16:27.63:0,28,312	0/0:12,0:12:29.97:0,30,293	0/0:26,0:26:61.84:0,62,621	0/0:24,0:24:52.72:0,53,439	0/0:24,0:24:53.01:0,53,564	0/0:18,0:18:38.36:0,38,471	1/1:15,1:16:28.31:230,28,0	1/1:21,3:24:40.56:342,41,0	1/1:10,0:10:15.20:120,15,0	0/0:14,0:14:32.88:0,33,334	0/0:22,0:22:57.49:0,57,560	0/0:8,0:8:20.94:0,21,187	0/0:15,0:15:34.71:0,35,338	0/0:14,0:14:33.89:0,34,339	1/1:20,1:21:22.11:214,22,0	0/0:8,0:8:21.03:0,21,236
chr10	50090133	.	C	CA	1176.11	PASS	AB=0.915;AC=7;AF=0.125;AN=56;BaseQRankSum=-10.078;DP=564;FS=7.468;HRun=9;HaplotypeScore=56.3250;InbreedingCoeff=0.5267;MQ=79.01;MQ0=0;MQRankSum=-3.092;QD=10.50;ReadPosRankSum=1.053;VQSLOD=2.0113;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,33:38:69.19:763,69,0	0/0:10,0:10:23.98:0,24,208	0/0:15,0:15:23.93:0,24,201	0/0:15,0:15:20.78:0,21,170	0/0:11,0:11:23.97:0,24,208	0/0:17,0:17:35.98:0,36,313	0/0:30,0:30:77.95:0,78,672	0/1:22,2:24:12.39:12,0,363	0/0:19,0:19:49.21:0,49,440	0/0:32,0:32:80.95:0,81,701	0/0:12,0:12:20.97:0,21,182	0/0:17,0:17:47.99:0,48,416	0/0:15,1:16:11.81:0,12,331	0/0:27,0:27:71.94:0,72,620	0/0:20,0:20:44.91:0,45,381	1/1:3,17:20:29.89:510,30,0	0/0:40,0:40:99:0,111,958	0/0:20,0:20:53.97:0,54,469	0/1:16,2:18:24.22:24,0,271	0/0:11,0:12:20.02:0,20,162	0/0:27,2:32:15.65:0,16,562	0/0:13,0:13:32.98:0,33,286	0/1:11,1:12:3.20:3,0,202	0/0:24,0:24:65.98:0,66,571	0/0:14,0:14:10.62:0,11,261	0/0:25,1:26:35.80:0,36,540	0/0:23,0:23:62.98:0,63,547	0/0:7,0:7:17.99:0,18,156
chr10	50092989	.	AGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAG	A	1572.37	PASS	AB=1.000;AC=6;AF=0.115;AN=52;BaseQRankSum=3.334;DP=536;FS=7.038;HRun=0;HaplotypeScore=395.0434;InbreedingCoeff=0.5793;MQ=58.83;MQ0=13;MQRankSum=-3.024;QD=26.65;ReadPosRankSum=0.346;VQSLOD=0.5878;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:13,1:13:9.02:205,9,0	0/0:9,0:9:27.09:0,27,2602	./.	./.	0/0:20,0:20:48.16:0,48,4588	0/0:22,0:21:45.15:0,45,4319	0/0:23,0:22:45.15:0,45,3062	0/0:9,0:8:8.82:0,9,164	0/0:19,0:19:51.18:0,51,3768	0/0:24,0:23:51.18:0,51,5124	0/0:21,0:21:45.14:0,45,4402	0/0:19,0:19:39.13:0,39,3918	0/0:15,0:15:30.10:0,30,2171	0/0:26,0:26:60.21:0,60,5771	0/0:22,0:22:48.16:0,48,4965	1/1:16,4:20:27.09:1249,27,0	0/0:32,0:32:87.21:0,87,8752	0/0:24,0:24:49.04:0,49,4340	0/1:11,0:8:66.25:66,0,788	0/0:27,0:26:64.46:0,64,5396	0/1:14,0:12:99:181,0,1406	0/0:27,0:27:66.23:0,66,6324	0/0:21,0:21:57.18:0,57,5128	0/0:29,0:29:79.51:0,80,7352	0/0:20,0:20:51.17:0,51,5403	0/0:26,0:26:57.20:0,57,4969	0/0:17,0:15:30.10:0,30,2592	0/0:9,0:9:27.09:0,27,2838
chr10	50093085	.	AGG	A	1157.96	PASS	AB=0.858;AC=9;AF=0.161;AN=56;BaseQRankSum=10.836;DP=755;FS=5.139;HRun=3;HaplotypeScore=119.9902;InbreedingCoeff=0.3375;MQ=55.16;MQ0=15;MQRankSum=-9.414;QD=6.65;ReadPosRankSum=-0.934;VQSLOD=-0.1461;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:23,9:32:26.62:386,27,0	0/0:14,0:14:42.14:0,42,802	0/0:25,0:10:24.07:0,24,377	0/0:28,0:10:20.75:0,21,262	0/0:21,0:21:60.21:0,60,1103	0/0:28,0:28:81.28:0,81,1470	0/0:37,0:37:76.93:0,77,1971	0/1:31,1:21:28.83:29,0,292	0/0:36,0:36:99:0,105,1870	0/0:38,0:38:99:0,111,2062	0/0:21,0:21:63.21:0,63,1121	0/0:26,0:26:78.25:0,78,1436	0/0:21,0:21:63.22:0,63,1174	0/0:38,0:38:99:0,114,2064	0/0:32,0:32:96.33:0,96,1777	1/1:25,10:35:23.61:435,24,0	0/0:36,0:36:99:0,105,1878	0/0:30,0:30:87.30:0,87,1628	0/1:21,1:21:90.39:90,0,328	0/1:16,7:22:99:192,0,295	0/1:5,2:7:21.23:33,0,21	0/0:18,0:18:54.19:0,54,998	0/0:23,0:23:69.23:0,69,1220	0/0:32,0:32:72:0,72,1603	0/0:31,0:31:93.32:0,93,1721	0/0:32,0:32:96.33:0,96,1751	0/1:18,5:18:99:146,0,185	0/0:14,0:14:42.14:0,42,764
chr10	50093086	.	G	GAAA	1863.75	PASS	AB=0.975;AC=11;AF=0.196;AN=56;BaseQRankSum=12.574;DP=746;FS=3.442;HRun=3;HaplotypeScore=128.1512;InbreedingCoeff=0.6523;MQ=55.52;MQ0=14;MQRankSum=-9.379;QD=11.23;ReadPosRankSum=-2.449;VQSLOD=-0.5070;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:10,17:32:39.12:526,39,0	0/0:14,0:14:42.13:0,42,706	0/0:24,0:10:24.07:0,24,377	0/0:27,0:10:21.63:0,22,272	0/0:21,0:21:60.19:0,60,1054	0/0:28,0:28:81.20:0,81,1287	0/0:37,0:37:77:0,77,1748	0/1:28,0:18:60.13:60,0,239	0/0:36,0:36:99:0,105,1754	0/0:38,0:38:99:0,111,1876	0/0:21,0:21:61.45:0,61,1068	0/0:26,0:26:78.25:0,78,1365	0/0:21,0:21:63.22:0,63,1109	0/0:38,0:38:99:0,114,1922	0/0:32,0:32:96.30:0,96,1680	1/1:10,19:34:47.84:668,48,0	0/0:36,0:36:99:0,105,1784	0/0:31,0:31:87.28:0,87,1513	0/1:18,0:18:99:126,0,117	1/1:23,0:22:20.97:376,21,0	1/1:7,0:7:13.18:101,13,0	0/0:18,0:18:54.18:0,54,942	0/0:23,0:23:69.22:0,69,1160	0/0:31,0:32:75.42:0,75,1513	0/0:31,0:31:93.23:0,93,1539	0/0:32,0:32:96.29:0,96,1597	0/1:22,0:18:39.19:178,0,39	0/0:14,0:14:42.14:0,42,743
chr10	50096900	.	A	AC	1200.08	PASS	AB=1.000;AC=12;AF=0.214;AN=56;BaseQRankSum=5.970;DP=351;FS=1.470;HRun=7;HaplotypeScore=61.6861;InbreedingCoeff=0.7604;MQ=88.23;MQ0=1;MQRankSum=-4.876;QD=10.81;ReadPosRankSum=-3.069;VQSLOD=1.3829;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:15.02:0,15,145	0/0:6,0:6:15.02:0,15,145	0/1:28,0:23:17.30:17,0,235	0/1:18,0:18:2.53:3,0,253	0/0:14,0:14:30.05:0,30,289	0/0:18,0:18:36.06:0,36,347	0/0:15,0:15:45.07:0,45,434	1/1:11,10:21:30.08:353,30,0	0/0:15,0:15:36.06:0,36,347	0/0:13,0:13:27.04:0,27,261	0/0:20,0:20:39.06:0,39,376	0/0:9,0:9:18.02:0,18,174	0/0:6,0:6:15:0,15,138	0/0:10,0:10:21.03:0,21,202	0/0:14,0:14:33.03:0,33,312	0/0:15,0:15:33.01:0,33,311	0/0:8,0:8:18.03:0,18,173	0/0:11,0:11:27.04:0,27,261	1/1:5,9:14:30.06:337,30,0	1/1:4,3:7:12.04:145,12,0	1/1:6,3:9:14.90:170,15,0	0/0:11,0:11:12.02:0,12,116	0/0:9,0:9:15.02:0,15,145	0/0:16,0:16:36.05:0,36,344	0/0:13,0:13:18.03:0,18,174	0/0:4,0:4:6.01:0,6,58	1/1:6,7:13:30.08:350,30,0	0/0:4,0:4:9.01:0,9,87
chr10	50096915	.	AC	A	1219.50	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=6.596;DP=334;FS=4.695;HRun=8;HaplotypeScore=53.3861;InbreedingCoeff=0.9401;MQ=85.39;MQ0=1;MQRankSum=-2.961;QD=20.32;ReadPosRankSum=-2.903;VQSLOD=2.5782;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:3,0:9:11.50:0,12,59	0/0:5,0:5:15.03:0,15,169	0/0:25,0:18:17.90:0,18,216	0/0:19,0:18:7.54:0,8,219	0/0:14,0:14:30.09:0,30,362	0/0:16,0:16:42.11:0,42,490	0/0:19,0:19:54.16:0,54,640	1/1:5,11:16:39.04:369,39,0	0/0:13,0:13:33.09:0,33,382	0/0:12,0:12:30.08:0,30,345	0/0:19,0:19:44.94:0,45,541	0/0:9,0:9:24.07:0,24,290	0/0:6,0:6:15.05:0,15,181	0/0:9,0:9:24.06:0,24,278	0/0:15,0:15:36.10:0,36,423	0/0:4,0:15:28.68:0,29,146	0/0:9,0:10:26.95:0,27,304	0/0:10,0:10:30.02:0,30,321	1/1:5,10:15:33.01:310,33,0	1/1:0,5:5:14.94:132,15,0	1/1:1,10:11:30.03:284,30,0	0/0:7,0:7:12.03:0,12,136	0/0:6,0:6:15.03:0,15,168	0/0:16,0:16:39.04:0,39,430	0/0:8,0:8:24.06:0,24,278	0/0:7,0:7:18.05:0,18,206	1/1:4,9:13:32.98:298,33,0	0/0:5,0:5:12.04:0,12,145
chr10	50097511	.	AG	A	4200.03	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=10.552;DP=664;FS=0.000;HRun=1;HaplotypeScore=65.3481;InbreedingCoeff=0.9997;MQ=91.28;MQ0=0;MQRankSum=-2.818;QD=39.25;ReadPosRankSum=-0.471;VQSLOD=3.8688;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,150,2310	0/0:14,0:14:42.14:0,42,671	0/0:27,0:27:81.24:0,81,1268	0/0:26,0:26:75.25:0,75,1182	0/0:29,0:29:87.30:0,87,1388	0/0:17,0:17:48.16:0,48,767	0/0:29,0:29:87.28:0,87,1365	1/1:0,29:29:87.27:1183,87,0	0/0:17,0:17:51.17:0,51,813	0/0:28,0:28:84.29:0,84,1340	0/0:17,0:17:48.16:0,48,767	0/0:29,0:29:87.30:0,87,1377	0/0:25,0:25:75.26:0,75,1199	0/0:24,0:24:72.25:0,72,1151	0/0:23,0:23:69.21:0,69,1054	0/0:21,0:21:63.21:0,63,1007	0/0:31,0:31:93.32:0,93,1486	0/0:19,0:19:57.19:0,57,911	1/1:0,15:15:45.15:629,45,0	1/1:0,14:14:39.13:542,39,0	1/1:0,26:26:72.24:1007,72,0	0/0:18,0:18:51.16:0,51,792	0/0:22,0:22:66.22:0,66,1035	0/0:32,0:32:96.33:0,96,1535	0/0:18,0:18:54.18:0,54,861	0/0:31,0:31:93.29:0,93,1443	1/1:1,22:23:60.20:839,60,0	0/0:9,0:9:27.09:0,27,420
chr10	50098675	.	T	TA	1819.13	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-7.029;DP=600;FS=6.877;HRun=7;HaplotypeScore=65.7451;InbreedingCoeff=0.9698;MQ=75.72;MQ0=1;MQRankSum=-1.792;QD=25.99;ReadPosRankSum=0.184;VQSLOD=4.1395;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,44:47:99:1220,102,0	0/0:13,0:13:36.04:0,36,342	0/0:14,0:13:21.69:0,22,184	0/0:20,0:17:9.22:0,9,180	0/0:16,0:16:47.93:0,48,442	0/0:21,0:21:54.05:0,54,510	0/0:17,0:17:42.06:0,42,405	0/0:29,0:29:50.59:0,51,513	0/0:21,0:21:63.07:0,63,596	0/0:24,0:24:66.07:0,66,625	0/0:17,0:17:39.01:0,39,361	0/0:23,0:23:65.99:0,66,613	0/0:29,0:29:87.08:0,87,816	0/0:29,0:29:84.09:0,84,795	0/0:30,0:30:81.11:0,81,775	1/1:3,20:23:60.18:721,60,0	0/0:20,0:20:51.01:0,51,467	0/0:19,0:19:54.04:0,54,506	0/0:20,0:20:45.03:0,45,423	0/0:23,0:23:66:0,66,614	0/0:13,0:13:32.97:0,33,301	0/0:13,0:13:36.05:0,36,347	0/0:15,0:15:45.01:0,45,414	0/0:16,0:16:41.96:0,42,381	0/0:19,0:19:50.89:0,51,455	0/0:20,0:20:56.11:0,56,522	0/0:29,0:29:81.04:0,81,758	0/0:20,0:20:48.06:0,48,463
chr10	50099018	.	TTCTCTCTCTC	T	785.87	PASS	AB=0.789;AC=8;AF=0.200;AN=40;BaseQRankSum=1.987;DP=574;FS=1.741;HRun=0;HaplotypeScore=161.8350;InbreedingCoeff=0.3506;MQ=68.56;MQ0=21;MQRankSum=-3.946;QD=6.72;ReadPosRankSum=0.527;VQSLOD=2.8211;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:12.04:0,12,368	./.	./.	0/0:43,0:31:0:0,0,0	0/0:16,0:17:3.01:0,3,51	./.	./.	0/0:40,0:39:10.76:0,11,164	0/1:12,3:17:17.88:76,0,18	0/0:19,0:19:6.02:0,6,141	./.	1/1:13,2:15:5.76:151,6,0	1/1:17,4:19:15.05:438,15,0	0/0:19,0:20:11.87:0,12,156	0/0:19,0:19:9.03:0,9,197	0/0:24,0:23:12.03:0,12,572	0/0:28,0:26:21.05:0,21,381	0/0:11,0:9:8.98:0,9,108	0/0:16,0:16:6.02:0,6,275	./.	0/0:37,0:34:12.04:0,12,389	0/0:6,0:6:3.01:0,3,43	./.	1/1:35,4:37:3.01:42,3,0	./.	0/0:15,0:15:6.02:0,6,99	0/0:19,0:18:3.01:0,3,128	0/1:19,2:20:99:200,0,197
chr10	50099072	.	CGTGT	C	764.20	PASS	AB=0.969;AC=22;AF=0.440;AN=50;BaseQRankSum=2.478;DP=534;FS=12.607;HRun=0;HaplotypeScore=111.6106;InbreedingCoeff=0.2878;MQ=34.99;MQ0=65;MQRankSum=-0.862;QD=2.46;ReadPosRankSum=1.561;VQSLOD=1.6132;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:32,0:32:1.71:5,2,0	0/0:2,0:2:3.01:0,3,69	./.	./.	0/0:21,0:20:8.39:0,8,144	0/1:26,0:22:40.09:40,0,64	0/0:22,0:19:1.25:0,1,3	0/0:13,0:12:3.01:0,3,39	1/1:30,0:26:11.76:172,12,0	0/0:17,0:13:6.02:0,6,77	0/0:12,0:12:3.01:0,3,47	1/1:16,5:20:3.01:46,3,0	0/1:16,0:14:58.03:124,0,58	0/0:17,0:13:6.49:0,6,117	0/0:22,0:17:12.04:0,12,227	1/1:12,0:20:5.74:55,6,0	0/0:41,0:33:31.66:0,32,511	0/1:9,0:7:5.02:23,0,5	1/1:10,0:11:9.01:84,9,0	0/0:11,0:12:0:0,0,0	0/1:32,0:23:0:0,0,0	./.	1/1:13,1:12:8.92:138,9,0	1/1:24,15:34:3.01:45,3,0	0/0:21,0:18:18.48:0,18,359	0/1:18,0:16:19.22:19,0,362	1/1:9,0:13:14.96:140,15,0	0/1:17,0:14:25.09:25,0,203
chr10	50103356	.	T	TTGTATGTATGTA	2148.76	PASS	AB=0.900;AC=10;AF=0.185;AN=54;BaseQRankSum=7.009;DP=842;FS=7.080;HRun=0;HaplotypeScore=288.9755;InbreedingCoeff=0.6007;MQ=70.24;MQ0=2;MQRankSum=-8.092;QD=11.55;ReadPosRankSum=-3.877;VQSLOD=1.0378;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:34,1:35:2.41:402,2,0	0/0:20,0:20:33.08:0,33,782	1/1:22,0:17:2.84:15,3,0	./.	0/0:29,0:28:51.16:0,51,1406	0/0:26,0:28:54.15:0,54,1376	0/0:29,0:29:45.11:0,45,1146	0/0:38,0:38:14.97:0,15,135	0/0:35,0:35:42.13:0,42,1183	0/0:48,0:48:75.21:0,75,1784	0/0:29,0:29:57.18:0,57,1663	0/0:37,0:37:62.91:0,63,1781	0/0:50,0:51:90.26:0,90,2598	0/0:34,0:35:51.14:0,51,1492	0/0:37,0:38:78.21:0,78,2093	0/1:24,7:32:81.33:915,0,81	0/0:15,0:16:30.10:0,30,835	0/0:19,0:19:24.04:0,24,609	0/1:23,0:23:43.05:62,0,43	1/1:30,0:30:5.14:196,5,0	0/0:19,0:19:12.64:0,13,97	0/0:19,0:19:27.08:0,27,809	0/0:23,0:23:34.30:0,34,787	0/0:26,0:25:39.12:0,39,1073	0/0:36,0:36:51.11:0,51,1363	0/0:42,0:42:66.18:0,66,1835	1/1:44,0:44:42.14:702,42,0	0/0:12,0:12:30.02:0,30,532
chr10	50103392	.	A	ATGTGTGTG	5720.06	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=4.351;DP=790;FS=3.491;HRun=0;HaplotypeScore=202.9178;InbreedingCoeff=0.8594;MQ=56.82;MQ0=2;MQRankSum=-7.804;QD=29.95;ReadPosRankSum=-2.876;VQSLOD=4.1207;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:39:5.29:0,5,637	0/0:17,0:17:45.11:0,45,995	0/0:22,0:13:36.12:0,36,615	0/0:17,0:12:30.10:0,30,528	0/0:24,0:24:66.19:0,66,1535	0/0:30,0:30:84.24:0,84,1750	0/0:25,0:25:72.16:0,72,1473	1/1:49,0:49:99:1571,115,0	0/0:20,0:20:56.67:0,57,1214	0/0:41,0:41:99:0,108,2297	0/0:25,0:25:72.21:0,72,1704	0/0:34,0:34:99:0,102,2135	0/0:41,0:41:99:0,117,2700	0/0:33,0:33:96.23:0,96,1911	0/0:41,0:41:99:0,114,2386	0/1:24,0:24:99:190,0,402	0/0:18,0:18:48.15:0,48,1039	0/0:16,0:16:48.11:0,48,883	1/1:30,0:27:68.75:863,69,0	1/1:2,25:30:15.05:600,15,0	1/1:21,0:21:42.03:648,42,0	0/0:21,0:21:54.17:0,54,1152	0/0:23,0:23:58.97:0,59,1119	0/0:29,0:29:72.21:0,72,1517	0/0:27,0:27:81.20:0,81,1656	0/0:35,0:35:99:0,102,2248	1/1:2,32:36:42.23:1849,42,0	0/0:21,0:21:63.16:0,63,1109
chr10	50103572	.	G	GCA	6075.22	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-12.718;DP=685;FS=15.608;HRun=0;HaplotypeScore=79.8147;InbreedingCoeff=0.9962;MQ=74.23;MQ0=1;MQRankSum=-3.423;QD=40.23;ReadPosRankSum=-0.865;VQSLOD=4.9222;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,117,1556	0/0:14,0:14:33.09:0,33,423	0/0:23,0:23:60.20:0,60,797	0/0:24,0:24:44.50:0,45,609	0/0:22,0:22:51.15:0,51,661	0/0:25,0:25:69.23:0,69,918	0/0:22,0:22:63.21:0,63,839	1/1:5,15:20:45.14:730,45,0	0/0:21,0:21:51.17:0,51,679	0/0:29,0:29:75.23:0,75,982	0/0:16,0:16:42.14:0,42,559	0/0:30,0:30:75.23:0,75,984	0/0:29,0:29:78.26:0,78,1038	0/0:27,0:27:66.22:0,66,879	0/0:25,0:25:63.21:0,63,838	0/0:22,0:22:57.19:0,57,758	0/0:27,0:27:81.27:0,81,1078	0/0:17,0:17:42.14:0,42,559	1/1:1,18:20:54.17:893,54,0	1/1:1,23:24:66.23:1138,66,0	1/1:15,41:56:99:1965,114,0	0/0:23,0:23:60.20:0,60,798	0/0:15,0:15:33.09:0,33,424	0/0:23,0:23:66.22:0,66,879	0/0:19,0:19:57.19:0,57,759	0/0:30,0:30:72.24:0,72,959	1/1:0,30:30:78.27:1349,78,0	0/0:6,0:6:15.05:0,15,200
chr10	50103836	.	CTCTG	C	5644.47	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=16.486;DP=615;FS=11.194;HRun=0;HaplotypeScore=123.4136;InbreedingCoeff=0.9983;MQ=72.30;MQ0=0;MQRankSum=-16.569;QD=40.90;ReadPosRankSum=2.129;VQSLOD=4.9963;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,22:23:57.15:805,57,0	0/0:15,0:15:45.15:0,45,1232	0/0:13,0:13:39.13:0,39,1104	0/0:15,0:15:45.15:0,45,1153	0/0:22,0:22:66.21:0,66,1822	0/0:30,0:30:90.30:0,90,2546	0/0:21,0:21:63.20:0,63,1725	1/1:2,18:20:60.19:876,60,0	0/0:24,0:24:72.23:0,72,2000	0/0:34,0:34:99:0,102,2868	0/0:23,0:23:69.24:0,69,1991	0/0:25,0:25:72.23:0,72,2013	0/0:27,0:27:78.24:0,78,2131	0/0:26,0:26:78.27:0,78,2208	0/0:32,0:32:96.32:0,96,2702	1/1:0,21:21:63.21:922,63,0	0/0:27,0:27:81.26:0,81,2284	0/0:27,0:27:81.28:0,81,2330	1/1:1,14:15:45.15:697,45,0	1/1:1,21:22:63.21:886,63,0	1/1:1,10:11:26.95:320,27,0	0/0:17,0:17:48.15:0,48,1324	0/0:17,0:17:48.16:0,48,1322	0/0:25,0:25:75.26:0,75,2172	0/0:17,0:17:51.16:0,51,1392	0/0:34,0:34:99:0,102,2888	1/1:3,23:26:78.25:1139,78,0	0/0:6,0:6:18.06:0,18,521
chr10	50103841	.	AC	A	2737.28	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=17.204;DP=607;FS=11.408;HRun=1;HaplotypeScore=95.0603;InbreedingCoeff=0.9981;MQ=74.43;MQ0=0;MQRankSum=-15.778;QD=19.55;ReadPosRankSum=1.428;VQSLOD=2.8031;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,22:24:56.63:428,57,0	0/0:14,0:14:42.13:0,42,648	0/0:15,0:15:45.08:0,45,661	0/0:15,0:15:41.97:0,42,611	0/0:21,0:21:63.03:0,63,949	0/0:32,0:32:96.33:0,96,1534	0/0:19,0:19:57.19:0,57,907	1/1:2,18:20:59.80:478,60,0	0/0:23,0:23:69.22:0,69,1077	0/0:32,0:32:96.30:0,96,1465	0/0:24,0:24:72.23:0,72,1124	0/0:23,0:23:66.23:0,66,1053	0/0:26,0:26:75.23:0,75,1165	0/0:28,0:28:84.29:0,84,1337	0/0:31,0:31:93.30:0,93,1464	1/1:0,21:21:62.75:481,63,0	0/0:26,0:26:78.24:0,78,1218	0/0:28,0:28:84.26:0,84,1313	1/1:1,14:15:44.96:378,45,0	1/1:3,21:24:65.01:449,65,0	1/1:2,10:12:23.64:163,24,0	0/0:16,0:16:48.16:0,48,767	0/0:16,0:16:45.05:0,45,663	0/0:25,0:25:75.26:0,75,1191	0/0:14,0:14:42.14:0,42,670	0/0:33,0:33:99:0,99,1563	1/1:1,23:24:71.68:559,72,0	0/0:6,0:6:18.01:0,18,237
chr10	50103842	.	C	CA	2288.62	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=17.116;DP=630;FS=5.386;HRun=2;HaplotypeScore=106.9000;InbreedingCoeff=0.9941;MQ=74.25;MQ0=0;MQRankSum=-16.721;QD=14.13;ReadPosRankSum=-0.480;VQSLOD=2.7939;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:25,5:30:61.95:362,62,0	0/0:14,0:14:42.12:0,42,508	0/0:16,0:16:44.98:0,45,474	0/0:15,0:15:39.10:0,39,468	0/0:22,0:22:57.18:0,57,707	0/0:32,0:32:96.30:0,96,1190	0/0:19,0:19:57.15:0,57,681	1/1:22,4:26:68.95:441,69,0	0/0:23,0:23:66.21:0,66,818	0/0:31,0:31:87.25:0,87,1059	0/0:24,0:24:69.22:0,69,854	0/0:22,0:22:66.19:0,66,806	0/0:26,0:26:72.19:0,72,865	0/0:28,0:28:84.22:0,84,1002	0/0:32,0:32:93.28:0,93,1140	1/1:21,0:21:57.50:251,57,0	0/0:26,0:26:75.22:0,75,916	0/0:28,0:28:78.24:0,78,967	1/1:17,2:19:54.81:341,55,0	1/1:26,2:28:65.97:479,66,0	1/1:12,1:13:26.20:246,26,0	0/0:18,0:18:48.15:0,48,595	0/0:16,0:16:39.12:0,39,483	0/0:25,0:25:72.19:0,72,866	0/0:14,0:14:42.11:0,42,497	0/0:33,0:33:96.30:0,96,1190	1/1:24,1:25:69.86:368,70,0	0/0:4,0:4:12.04:0,12,149
chr10	50106095	.	T	TAGTGTG	2726.25	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-2.174;DP=726;FS=10.955;HRun=0;HaplotypeScore=166.0866;InbreedingCoeff=0.9686;MQ=67.18;MQ0=3;MQRankSum=-5.798;QD=20.97;ReadPosRankSum=-5.142;VQSLOD=0.9648;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:30.54:0,31,534	0/0:9,0:9:24.08:0,24,494	0/0:37,0:29:53.91:0,54,679	0/0:33,0:19:26.77:0,27,287	0/0:29,0:29:63.22:0,63,1305	0/0:31,0:31:71.82:0,72,1185	0/0:27,0:27:50.86:0,51,787	1/1:38,0:38:54.34:1068,54,0	0/0:31,0:31:69.14:0,69,1157	0/0:41,0:41:87.27:0,87,1641	0/0:21,0:21:54.11:0,54,932	0/0:26,0:26:63.20:0,63,1258	0/0:24,0:24:48.15:0,48,956	0/0:20,0:20:51.17:0,51,1055	0/0:24,0:24:62.52:0,63,1136	0/0:17,0:17:33.09:0,33,602	0/0:40,0:40:78.16:0,78,1524	0/0:22,0:22:23.54:0,24,895	1/1:17,1:18:36.07:487,36,0	1/1:11,11:25:21.05:416,21,0	1/1:10,14:26:5.59:71,6,0	0/0:29,0:29:69.22:0,69,1387	0/0:22,0:22:48.15:0,48,957	0/0:21,0:21:60.16:0,60,1107	0/0:27,0:27:54.16:0,54,1045	0/0:28,0:28:54.18:0,54,1087	1/1:6,17:22:26.85:854,27,0	0/0:11,0:11:18.06:0,18,366
chr10	50106110	.	T	TGTGA	1283.92	PASS	AB=0.890;AC=4;AF=0.071;AN=56;BaseQRankSum=0.756;DP=744;FS=7.826;HRun=0;HaplotypeScore=150.6042;InbreedingCoeff=-0.0772;MQ=58.08;MQ0=9;MQRankSum=-5.004;QD=12.23;ReadPosRankSum=-1.605;VQSLOD=2.3978;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:29.91:0,30,482	0/0:10,0:10:27.09:0,27,491	0/0:41,0:25:63.86:0,64,758	0/0:31,0:13:33.03:0,33,409	0/0:29,0:29:81.28:0,81,1473	0/0:29,0:29:84.08:0,84,1348	0/0:25,0:25:60.13:0,60,955	0/1:43,0:42:99:536,0,413	0/0:31,0:31:78.19:0,78,1284	0/0:35,0:35:99:0,105,1855	0/0:26,0:26:69.17:0,69,1139	0/0:27,0:27:78.03:0,78,1340	0/0:21,0:21:54.17:0,54,968	0/0:24,0:24:69.21:0,69,1194	0/0:26,0:26:37.57:0,38,1181	0/0:21,0:21:38.99:0,39,617	0/0:37,0:37:90.01:0,90,1544	0/0:24,0:24:46.11:0,46,944	0/1:11,9:19:99:325,0,262	0/1:21,2:23:99:161,0,150	0/0:35,0:35:30.55:0,31,388	0/0:28,0:28:81.28:0,81,1480	0/0:19,0:19:54.18:0,54,991	0/0:28,0:28:72.16:0,72,1193	0/0:30,0:30:75.24:0,75,1292	0/0:21,0:20:60.21:0,60,1122	0/1:18,0:18:62.72:372,0,63	0/0:7,0:7:21.07:0,21,381
chr10	50106154	.	G	GGT	2388.65	PASS	AB=0.829;AC=12;AF=0.214;AN=56;BaseQRankSum=6.104;DP=768;FS=1.017;HRun=0;HaplotypeScore=129.4956;InbreedingCoeff=0.5811;MQ=51.92;MQ0=18;MQRankSum=-7.449;QD=10.71;ReadPosRankSum=-1.483;VQSLOD=3.3442;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:25,7:33:20.76:223,21,0	0/0:11,0:11:30.08:0,30,355	0/0:40,0:8:9:0,9,93	0/1:46,0:10:3.83:4,0,132	0/0:25,0:26:59.93:0,60,639	0/0:25,0:25:57.13:0,57,683	0/0:33,0:33:65.88:0,66,761	1/1:18,5:23:39.53:514,40,0	0/0:30,0:30:78.16:0,78,905	0/0:35,0:35:78.16:0,78,884	0/0:27,0:27:66.21:0,66,809	0/0:25,0:25:57.17:0,57,689	0/0:25,0:25:63.16:0,63,748	0/0:25,0:25:57.17:0,57,691	0/0:37,0:37:80.62:0,81,1004	0/1:13,8:21:6.38:354,0,6	0/0:36,0:36:44.17:0,44,716	0/0:19,0:18:45.14:0,45,548	0/1:14,2:12:8.69:152,0,9	0/1:15,7:23:9.91:350,0,10	1/1:26,15:39:42.14:646,42,0	0/0:27,0:27:62.65:0,63,735	0/0:23,0:22:51.15:0,51,615	0/0:37,0:37:90.03:0,90,1068	0/0:29,0:29:57.16:0,57,677	0/0:26,0:25:51.12:0,51,595	1/1:13,6:16:0.78:310,1,0	0/0:9,0:9:21.07:0,21,258
chr10	50106191	.	GTA	G	1360.70	PASS	AB=0.980;AC=16;AF=0.286;AN=56;BaseQRankSum=9.574;DP=737;FS=0.836;HRun=0;HaplotypeScore=122.0186;InbreedingCoeff=0.8155;MQ=50.42;MQ0=19;MQRankSum=-6.150;QD=5.13;ReadPosRankSum=-5.225;VQSLOD=1.2771;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:31,6:37:21.27:183,21,0	0/0:8,0:8:12.09:0,12,334	0/1:46,0:16:31.61:32,0,167	0/1:47,0:13:22.87:23,0,131	0/0:23,0:23:36.65:0,37,920	0/0:27,0:27:37.47:0,37,872	0/0:32,0:33:40.17:0,40,961	1/1:24,0:23:36.76:360,37,0	0/0:28,0:28:76.24:0,76,1147	0/0:27,0:27:72.30:0,72,1135	0/0:23,0:23:48.18:0,48,910	0/0:31,0:31:47.07:0,47,1088	0/0:25,0:25:70.29:0,70,1139	0/0:26,0:26:46.42:0,46,1038	0/0:30,0:30:68.51:0,69,1287	1/1:5,13:18:18.24:170,18,0	0/0:35,0:35:76.36:0,76,1237	0/0:19,0:18:47.39:0,47,572	1/1:11,1:10:22.10:160,22,0	1/1:17,8:25:23.75:208,24,0	1/1:36,1:37:24.78:194,25,0	0/0:24,0:24:55.99:0,56,797	0/0:20,0:20:60.06:0,60,953	0/0:33,0:32:71.49:0,71,1205	0/0:20,0:20:36.70:0,37,650	0/0:26,0:26:54.43:0,54,1158	1/1:10,6:16:17.03:233,17,0	0/0:14,0:14:38.21:0,38,519
chr10	50106207	.	GTGTA	G	1023.07	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=4.323;DP=710;FS=5.244;HRun=0;HaplotypeScore=139.9022;InbreedingCoeff=0.8731;MQ=58.60;MQ0=13;MQRankSum=-4.040;QD=6.87;ReadPosRankSum=-3.432;VQSLOD=1.5315;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:33:24.48:96,0,24	0/0:8,0:8:23.57:0,24,505	0/0:37,0:22:66.19:0,66,1152	0/0:44,0:25:67.40:0,67,993	0/0:20,0:20:60.19:0,60,1423	0/0:27,0:27:71.90:0,72,1449	0/0:33,0:33:80.77:0,81,1794	1/1:28,0:27:18.41:274,18,0	0/0:28,0:28:78.04:0,78,1710	0/0:25,0:25:74.44:0,74,1610	0/0:25,0:25:66.16:0,66,1457	0/0:33,0:33:87.18:0,87,1882	0/0:30,0:30:84.23:0,84,1968	0/0:26,0:26:66.18:0,66,1451	0/0:35,0:35:99:0,99,2082	1/1:18,0:18:24.09:245,24,0	0/0:36,0:36:95.36:0,95,2301	0/0:17,0:16:36.10:0,36,823	1/1:7,1:7:17.60:137,18,0	1/1:10,6:16:9.78:118,10,0	1/1:31,0:31:8.96:73,9,0	0/0:20,0:20:54.19:0,54,1408	0/0:22,0:22:66.17:0,66,1571	0/0:32,0:31:78.21:0,78,1897	0/0:19,0:19:54.03:0,54,1037	0/0:31,0:31:90.25:0,90,1942	1/1:10,5:15:22.41:265,22,0	0/0:13,0:13:30.10:0,30,776
chr10	50106209	.	GTA	G	1118.81	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=4.732;DP=691;FS=1.038;HRun=0;HaplotypeScore=112.2376;InbreedingCoeff=0.9585;MQ=61.18;MQ0=10;MQRankSum=-2.980;QD=8.23;ReadPosRankSum=-2.111;VQSLOD=2.8810;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:33,1:34:24.59:221,25,0	0/0:8,0:8:21.53:0,22,358	0/0:37,0:24:72.10:0,72,1006	0/0:43,0:27:73.15:0,73,980	0/0:20,0:20:60.18:0,60,1053	0/0:27,0:27:48.85:0,49,1049	0/0:31,0:31:80.89:0,81,1336	1/1:20,0:19:18.08:294,18,0	0/0:28,0:28:81.15:0,81,1296	0/0:25,0:25:75.03:0,75,1121	0/0:24,0:24:65.52:0,66,1041	0/0:32,0:32:76.40:0,76,1299	0/0:31,0:31:87.19:0,87,1473	0/0:23,0:23:54.42:0,54,954	0/0:35,0:35:99:0,99,1528	1/1:15,3:18:30.33:279,30,0	0/0:38,0:38:90.32:0,90,1700	0/0:17,0:16:35.41:0,35,558	1/1:7,0:7:19.16:148,19,0	1/1:14,1:15:9.11:104,9,0	1/1:28,1:29:9.39:71,9,0	0/0:21,0:21:57.18:0,57,1043	0/0:22,0:22:66.17:0,66,1163	0/0:32,0:31:78.06:0,78,1365	0/0:19,0:19:11.11:0,11,712	0/0:31,0:31:90.03:0,90,1418	1/1:13,0:13:9.29:191,9,0	0/0:11,0:11:30.10:0,30,575
chr10	50106408	.	AT	A	6216.42	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=14.212;DP=795;FS=0.957;HRun=7;HaplotypeScore=78.3079;InbreedingCoeff=0.9966;MQ=75.48;MQ0=0;MQRankSum=-0.761;QD=24.28;ReadPosRankSum=0.791;VQSLOD=5.0534;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,39:42:96.21:979,96,0	0/0:11,0:11:33.11:0,33,415	0/0:22,0:21:47.88:0,48,553	0/0:14,0:14:27.06:0,27,294	0/0:29,0:29:75.23:0,75,929	0/0:23,0:22:60.18:0,60,740	0/0:23,0:23:48.15:0,48,604	1/1:6,37:43:99:1064,105,0	0/0:35,0:35:90.20:0,90,1072	0/0:40,0:40:99:0,111,1386	0/0:22,0:22:60.04:0,60,709	0/0:36,0:36:96.25:0,96,1177	0/0:29,0:29:81.24:0,81,979	0/0:30,0:30:87.26:0,87,1069	0/0:31,0:31:81.26:0,81,1018	1/1:1,44:45:99:1041,102,0	0/0:25,0:25:75.14:0,75,906	0/0:15,0:15:39.12:0,39,491	1/1:4,28:32:84.17:851,84,0	1/1:3,25:28:69.15:704,69,0	1/1:5,30:35:14.73:782,15,0	0/0:31,0:31:81.26:0,81,1019	0/0:28,0:28:78.25:0,78,970	0/0:25,0:25:69.18:0,69,850	0/0:26,0:26:75.22:0,75,922	0/0:32,0:32:87.25:0,87,1078	1/1:1,30:31:78.18:796,78,0	0/0:12,0:12:36.12:0,36,453
chr10	50107159	.	TG	T	4743.26	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=10.448;DP=682;FS=2.692;HRun=1;HaplotypeScore=71.7440;InbreedingCoeff=0.9972;MQ=88.19;MQ0=0;MQRankSum=-0.530;QD=37.64;ReadPosRankSum=-3.049;VQSLOD=4.1989;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,135,2103	0/0:15,0:15:45.15:0,45,707	0/0:24,0:24:71.60:0,72,1073	0/0:26,0:25:68.81:0,69,1000	0/0:32,0:32:93.32:0,93,1486	0/0:22,0:22:66.23:0,66,1055	0/0:20,0:20:60.19:0,60,933	1/1:1,37:38:99:1532,111,0	0/0:25,0:25:75.26:0,75,1193	0/0:22,0:22:66.23:0,66,1054	0/0:22,0:22:66.23:0,66,1051	0/0:20,0:20:60.20:0,60,955	0/0:31,0:31:93.32:0,93,1475	0/0:16,0:16:48.16:0,48,766	0/0:32,0:32:93.30:0,93,1457	0/0:28,0:28:84.23:0,84,1269	0/0:21,0:21:63.20:0,63,978	0/0:19,0:19:57.19:0,57,911	1/1:0,18:18:54.16:736,54,0	1/1:0,26:26:69.23:965,69,0	1/1:0,11:11:21.07:294,21,0	0/0:27,0:27:81.28:0,81,1295	0/0:23,0:23:69.20:0,69,1050	0/0:20,0:20:60.20:0,60,959	0/0:26,0:26:78.27:0,78,1240	0/0:33,0:33:99:0,99,1536	1/1:0,33:33:87.29:1217,87,0	0/0:6,0:6:18.06:0,18,288
chr10	50109815	.	CGGAGGGCAGAGGGGACTTGCGTG	C	4147.92	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=4.830;DP=701;FS=5.308;HRun=0;HaplotypeScore=399.7126;InbreedingCoeff=0.9974;MQ=78.91;MQ0=0;MQRankSum=-1.196;QD=40.67;ReadPosRankSum=-1.892;VQSLOD=0.9378;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,135,7490	0/0:20,0:20:60.05:0,60,2909	0/0:18,0:18:53.96:0,54,816	0/0:22,0:22:50.20:0,50,1297	0/0:26,0:26:67.20:0,67,4231	0/0:23,0:23:63.08:0,63,3981	0/0:37,0:37:99:0,99,5662	1/1:24,0:24:60.07:654,60,0	0/0:19,0:19:56.98:0,57,4006	0/0:19,0:19:48.12:0,48,2829	0/0:9,0:9:21.05:0,21,1738	0/0:26,0:26:78.12:0,78,5210	0/0:22,0:22:56.77:0,57,4747	0/0:26,0:26:75.18:0,75,5675	0/0:39,0:39:99:0,102,6472	0/0:28,0:28:78.16:0,78,4251	0/0:38,0:38:99:0,111,7365	0/0:38,0:38:99:0,108,8659	1/1:5,12:17:35.89:613,36,0	1/1:4,14:18:23.75:654,24,0	1/1:17,0:17:41.06:352,41,0	0/0:23,0:23:57.15:0,57,3421	0/0:20,0:20:57.08:0,57,3632	0/0:39,0:39:99:0,114,8758	0/0:29,0:29:81.25:0,81,6560	0/0:21,0:21:63.12:0,63,3703	1/1:0,26:26:30.20:1875,30,0	0/0:8,0:8:21.05:0,21,1509
chr10	50110740	.	GCACACACACA	G	4725.78	PASS	AB=0.821;AC=10;AF=0.185;AN=54;BaseQRankSum=10.735;DP=591;FS=27.332;HRun=0;HaplotypeScore=188.1248;InbreedingCoeff=0.7106;MQ=68.70;MQ0=7;MQRankSum=-3.780;QD=35.27;ReadPosRankSum=1.033;VQSLOD=2.6347;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:36,0:40:99:822,0,103	0/0:5,0:5:15.05:0,15,537	0/0:37,0:31:87.27:0,87,3645	0/0:23,0:17:34.20:0,34,1474	0/0:28,0:28:72.25:0,72,3259	0/0:24,0:24:49.38:0,49,1717	0/0:23,0:23:63.17:0,63,2300	1/1:11,16:25:42.14:1353,42,0	0/0:19,0:19:48.16:0,48,1834	0/0:19,0:19:54.18:0,54,2276	0/0:18,0:18:45.14:0,45,1781	0/0:27,0:27:75.26:0,75,3194	0/0:17,0:17:45.15:0,45,2020	0/0:18,0:17:48.16:0,48,1841	0/0:18,0:18:48.16:0,48,1992	0/1:14,0:21:99:434,0,122	0/0:32,0:32:84.12:0,84,3244	0/0:25,0:24:63.22:0,63,2343	1/1:3,10:13:30.09:893,30,0	1/1:5,7:12:18.06:506,18,0	./.	0/0:16,0:16:35.28:0,35,1425	0/0:16,0:16:33.58:0,34,1441	0/0:24,0:24:72.23:0,72,3083	0/0:21,0:21:57.20:0,57,2365	0/0:19,0:19:57.19:0,57,2371	1/1:7,13:20:4.45:719,4,0	0/0:17,0:17:51.13:0,51,2100
chr10	50110752	.	A	ACTCT	1277.91	PASS	AB=0.990;AC=23;AF=0.442;AN=52;BaseQRankSum=7.717;DP=690;FS=7.056;HRun=0;HaplotypeScore=182.0920;InbreedingCoeff=0.5322;MQ=56.19;MQ0=25;MQRankSum=-5.307;QD=3.58;ReadPosRankSum=-3.399;VQSLOD=1.1095;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:49,0:47:15.01:202,15,0	1/1:6,0:7:6.02:90,6,0	./.	./.	0/0:29,0:29:24.48:0,24,292	1/1:16,11:30:1.29:67,1,0	0/0:21,0:21:20.99:0,21,262	1/1:46,0:41:40.99:287,41,0	1/1:15,0:21:5.91:63,6,0	0/0:17,0:16:17.93:0,18,226	0/0:20,0:23:29.82:0,30,356	0/1:31,0:30:24.70:104,0,25	0/0:14,0:14:21.06:0,21,283	0/0:19,0:19:6.66:0,7,124	1/1:18,0:25:5.05:48,5,0	1/1:23,0:23:3.75:101,4,0	0/1:29,0:30:17.69:18,0,99	0/0:17,0:27:3.95:0,4,196	1/1:24,0:24:17.92:201,18,0	1/1:20,0:20:0.47:1,0,0	0/0:10,0:9:0:0,0,0	0/0:17,4:21:2.75:0,3,38	0/1:17,0:20:16.40:16,0,82	0/0:33,0:31:28.42:0,28,463	0/0:21,0:23:30.08:0,30,367	0/0:21,0:19:21.02:0,21,221	1/1:28,0:27:27.46:256,27,0	0/0:21,0:19:10.85:0,11,132
chr10	50111128	.	AGGAGACTACAGTTGACCTCGTGC	A	6350.43	PASS	AB=0.578;AC=3;AF=0.054;AN=56;BaseQRankSum=9.662;DP=674;FS=7.918;HRun=0;HaplotypeScore=390.7142;InbreedingCoeff=0.6385;MQ=93.76;MQ0=0;MQRankSum=-9.645;QD=111.41;ReadPosRankSum=2.713;VQSLOD=3.7252;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,22:31:51.18:3162,51,0	0/0:7,0:7:21.07:0,21,1875	0/0:30,0:30:87.30:0,87,5532	0/0:32,0:32:90.10:0,90,6443	0/0:18,0:18:54.17:0,54,4972	0/0:17,0:17:51.18:0,51,4826	0/0:31,0:31:90.29:0,90,7913	0/0:28,0:28:81.26:0,81,6649	0/0:18,0:18:54.19:0,54,5155	0/0:18,0:18:48.16:0,48,5027	0/0:14,0:14:42.14:0,42,3535	0/0:28,0:28:84.29:0,84,8555	0/0:31,0:31:90.31:0,90,8826	0/0:31,0:31:93.32:0,93,9094	0/0:40,0:40:99:0,111,11643	0/1:7,19:26:99:3188,0,275	0/0:49,0:49:99:0,148,14539	0/0:28,0:28:84.29:0,84,8575	0/0:17,0:16:48.16:0,48,3856	0/0:14,0:14:42.14:0,42,4042	0/0:33,0:33:96.33:0,96,9782	0/0:12,0:12:36.12:0,36,3525	0/0:11,0:11:33.11:0,33,3082	0/0:40,0:40:99:0,117,11857	0/0:18,0:18:54.19:0,54,5438	0/0:15,0:15:45.14:0,45,4051	0/0:32,0:32:96.30:0,96,8762	0/0:5,0:5:15.05:0,15,1322
chr10	50111543	.	CAG	C	4617.03	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=12.728;DP=682;FS=4.056;HRun=0;HaplotypeScore=82.9155;InbreedingCoeff=0.9995;MQ=80.38;MQ0=2;MQRankSum=-3.786;QD=37.23;ReadPosRankSum=-2.758;VQSLOD=6.2181;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,111,2069	0/0:8,0:8:24.08:0,24,449	0/0:19,0:19:42.37:0,42,781	0/0:17,0:17:40.40:0,40,771	0/0:18,0:18:48.16:0,48,899	0/0:34,0:34:90.31:0,90,1678	0/0:28,0:28:84.29:0,84,1564	1/1:3,28:31:81.26:1173,81,0	0/0:22,0:22:63.20:0,63,1148	0/0:26,0:26:75.25:0,75,1375	0/0:12,0:12:36.12:0,36,671	0/0:24,0:24:69.24:0,69,1292	0/0:41,0:41:99:0,117,2155	0/0:32,0:32:90.29:0,90,1647	0/0:16,0:16:45.15:0,45,840	0/0:23,0:23:69.24:0,69,1293	0/0:37,0:37:99:0,105,1926	0/0:24,0:24:69.24:0,69,1292	1/1:2,17:19:51.14:705,51,0	1/1:0,21:20:51.17:751,51,0	1/1:1,18:18:48.16:707,48,0	0/0:29,0:29:87.28:0,87,1590	0/0:18,0:18:54.19:0,54,1011	0/0:33,0:33:99:0,99,1813	0/0:19,0:19:54.16:0,54,978	0/0:23,0:23:66.23:0,66,1234	1/1:1,33:34:87.29:1282,87,0	0/0:16,0:16:48.16:0,48,879
chr10	50112090	.	AT	A	3851.92	PASS	AB=0.571;AC=13;AF=0.232;AN=56;BaseQRankSum=13.406;DP=566;FS=0.000;HRun=3;HaplotypeScore=67.8297;InbreedingCoeff=0.9227;MQ=67.16;MQ0=2;MQRankSum=0.246;QD=22.93;ReadPosRankSum=0.780;VQSLOD=3.0258;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,24:26:60.08:704,60,0	0/0:3,0:3:9.02:0,9,113	0/0:15,0:12:23.37:0,23,182	0/0:18,0:13:16.04:0,16,216	0/0:34,0:34:98.14:0,98,1323	0/0:25,0:25:75.24:0,75,1043	0/0:15,0:15:42.09:0,42,527	1/1:3,30:32:76.68:762,77,0	0/0:19,0:19:51.13:0,51,660	0/0:19,0:19:57.17:0,57,785	0/0:25,0:25:69.16:0,69,909	0/0:17,0:17:36.72:0,37,591	0/0:22,0:22:66.12:0,66,858	0/0:19,0:19:38.34:0,38,701	0/0:25,0:25:75.16:0,75,913	1/1:2,24:26:20.08:683,20,0	0/0:20,0:20:60.11:0,60,769	0/0:9,0:9:27.09:0,27,386	1/1:4,17:21:33.65:524,34,0	1/1:0,23:22:53.88:544,54,0	0/1:3,9:11:2.14:91,0,2	0/0:13,0:13:39.06:0,39,517	0/0:13,1:14:17.11:0,17,472	0/0:11,0:11:30.06:0,30,390	0/0:29,0:29:87.25:0,87,1193	0/0:27,0:27:81.20:0,81,1033	1/1:0,25:26:48.06:543,48,0	0/0:18,0:18:51.08:0,51,672
chr10	50112093	.	TA	T	650.21	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=13.832;DP=579;FS=1.341;HRun=10;HaplotypeScore=82.5945;InbreedingCoeff=0.6325;MQ=68.71;MQ0=2;MQRankSum=-1.785;QD=3.76;ReadPosRankSum=1.723;VQSLOD=0.4078;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:26:28.91:197,29,0	0/0:3,0:3:6.02:0,6,66	0/0:19,0:15:18.41:0,18,163	0/0:21,0:15:21.03:0,21,216	0/0:34,1:35:64.30:0,64,927	0/0:27,0:27:75.17:0,75,806	0/0:15,0:15:36.08:0,36,388	0/1:33,0:32:64.84:65,0,70	0/0:17,0:17:39.11:0,39,431	0/0:21,0:21:57.14:0,57,617	0/0:22,0:22:57.15:0,57,630	0/0:16,1:17:22.14:0,22,457	0/0:22,0:22:54.15:0,54,596	0/0:18,1:19:25.12:0,25,503	0/0:26,0:26:48.11:0,48,522	1/1:26,0:26:22.32:178,22,0	0/0:20,0:20:48.13:0,48,531	0/0:9,0:9:27.07:0,27,298	0/1:23,0:22:58.13:58,0,76	1/1:26,0:25:13.08:147,13,0	0/1:12,0:11:13.99:14,0,69	0/0:14,0:14:39.09:0,39,421	0/0:14,0:14:14.14:0,14,359	0/0:10,1:11:27.07:0,27,299	0/0:28,0:28:78.21:0,78,862	0/0:29,0:29:66.17:0,66,721	1/1:27,0:27:39.43:161,39,0	0/0:17,0:17:51.08:0,51,531
chr10	50112505	.	C	CTT	2474.12	PASS	AB=0.900;AC=10;AF=0.179;AN=56;BaseQRankSum=9.514;DP=579;FS=24.746;HRun=4;HaplotypeScore=115.0589;InbreedingCoeff=0.7450;MQ=54.15;MQ0=17;MQRankSum=-10.084;QD=17.42;ReadPosRankSum=-1.653;VQSLOD=-0.2184;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:17,0:26:16.25:16,0,104	0/0:7,0:7:12.51:0,13,160	0/0:30,0:7:17.36:0,17,145	0/0:38,0:13:20.41:0,20,177	0/0:24,0:23:38.10:0,38,424	0/0:21,0:21:43.98:0,44,534	0/0:22,0:21:54:0,54,663	1/1:24,12:31:31.45:862,31,0	0/0:8,0:8:17.37:0,17,179	0/0:18,0:18:47.32:0,47,569	0/0:20,0:20:38.69:0,39,470	0/0:19,0:17:36.47:0,36,389	0/0:20,0:20:33.80:0,34,372	0/0:14,0:14:32.38:0,32,363	0/0:12,0:11:23.41:0,23,239	0/0:4,0:17:4.21:0,4,32	0/0:29,0:27:42.31:0,42,693	0/0:27,0:25:65.23:0,65,729	1/1:17,7:21:21.35:490,21,0	1/1:20,11:27:33.49:663,33,0	0/0:3,2:4:0.47:0,0,1	0/0:16,0:16:36.09:0,36,443	0/0:24,0:23:51.96:0,52,629	0/0:17,0:17:31.48:0,31,398	0/0:22,0:21:50.47:0,50,630	0/0:26,0:26:69.05:0,69,829	1/1:12,8:19:20.26:602,20,0	0/1:3,0:4:0.02:0,0,71
chr10	50112510	.	CT	C	153.23	PASS	AB=0.857;AC=11;AF=0.196;AN=56;BaseQRankSum=1.387;DP=561;FS=1.704;HRun=17;HaplotypeScore=103.2282;InbreedingCoeff=0.2625;MQ=51.02;MQ0=25;MQRankSum=-1.822;QD=0.89;ReadPosRankSum=1.023;VQSLOD=-0.5459;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:26:8.49:51,8,0	0/0:5,0:5:7.11:0,7,42	0/0:29,0:7:0:0,0,0	0/0:36,0:11:2.26:0,2,10	0/1:14,7:19:39.69:40,0,71	0/0:19,0:21:21.98:0,22,201	0/0:23,1:23:14.48:0,14,192	0/0:27,0:29:12.06:0,12,132	0/0:9,0:9:14.33:0,14,85	0/1:12,7:19:77.74:78,0,102	0/0:18,2:20:14.22:0,14,201	0/0:18,0:18:19.86:0,20,144	0/0:18,0:18:10.75:0,11,138	0/0:15,0:15:9.14:0,9,139	0/0:11,0:9:20.77:0,21,152	1/1:17,0:16:11.70:34,12,0	0/1:31,0:27:32.39:32,0,190	0/0:26,1:25:25.31:0,25,363	0/0:18,0:16:15.11:0,15,90	0/0:19,0:20:23.91:0,24,120	1/1:3,0:2:2.04:6,2,0	0/0:15,0:15:5.51:0,6,101	0/0:16,0:20:20.89:0,21,231	0/0:14,0:16:17.07:0,17,138	0/1:22,1:23:40.02:40,0,105	0/1:24,4:30:17.41:17,0,207	0/0:17,0:17:20.76:0,21,104	0/0:4,0:4:5.47:0,5,30
chr10	50112513	.	T	TTC	1293.21	PASS	AB=0.889;AC=10;AF=0.179;AN=56;BaseQRankSum=9.106;DP=583;FS=2.347;HRun=0;HaplotypeScore=115.2587;InbreedingCoeff=0.7001;MQ=49.20;MQ0=35;MQRankSum=-7.986;QD=9.65;ReadPosRankSum=-0.203;VQSLOD=3.5335;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:28:32.37:0,32,249	0/0:6,0:6:17.97:0,18,184	0/1:27,0:6:4.58:5,0,14	0/0:35,0:10:1.32:0,1,46	0/0:20,0:18:39.06:0,39,450	0/0:24,0:24:62.94:0,63,603	0/0:24,0:22:62.84:0,63,648	1/1:34,4:31:32.42:392,32,0	0/0:10,0:10:20.81:0,21,208	0/0:20,0:20:56.65:0,57,634	0/0:20,0:20:48.04:0,48,575	0/0:21,0:17:41.65:0,42,380	0/0:19,0:19:51.03:0,51,496	0/0:16,0:16:39.94:0,40,429	0/0:12,0:9:21:0,21,287	0/0:18,0:17:17.44:0,17,105	0/0:33,0:27:65.23:0,65,706	0/0:28,0:26:73.31:0,73,917	0/1:15,6:16:8.73:310,0,9	1/1:16,8:21:34.42:392,34,0	1/1:2,1:2:2.99:23,3,0	0/0:14,0:14:36.02:0,36,403	0/0:19,0:18:42.02:0,42,547	0/0:18,0:16:33.91:0,34,349	0/0:24,0:23:62.75:0,63,647	0/0:33,0:33:91.84:0,92,900	1/1:15,6:19:25.49:328,25,0	0/0:5,0:4:11.36:0,11,100
chr10	50112514	.	T	TC	380.03	PASS	AB=0.976;AC=8;AF=0.143;AN=56;BaseQRankSum=10.053;DP=584;FS=0.000;HRun=0;HaplotypeScore=106.2457;InbreedingCoeff=0.3894;MQ=48.98;MQ0=36;MQRankSum=-6.824;QD=2.84;ReadPosRankSum=0.759;VQSLOD=2.6644;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:28:47.07:0,47,273	0/0:6,0:6:17.97:0,18,172	0/1:27,0:6:4.49:4,0,14	0/0:34,0:9:3.86:0,4,45	0/0:19,0:17:39.04:0,39,410	0/0:25,0:25:58.26:0,58,524	0/0:25,0:23:54.98:0,55,590	0/1:36,2:31:3.53:164,0,4	0/0:10,0:10:16.68:0,17,178	0/0:20,0:20:57.06:0,57,587	0/0:19,0:19:47.99:0,48,534	0/0:21,0:17:39.59:0,40,337	0/0:19,0:19:46.35:0,46,458	0/0:16,0:16:40.43:0,40,391	0/0:12,0:9:19.61:0,20,247	0/0:19,0:18:19.89:0,20,104	0/0:33,0:27:63.64:0,64,655	0/0:28,0:26:73.34:0,73,835	0/1:21,0:16:10.38:78,0,10	1/1:22,2:21:23:153,23,0	1/1:3,0:2:0.47:1,0,0	0/0:15,0:15:38.98:0,39,402	0/0:18,0:17:38.92:0,39,483	0/0:18,0:16:29.20:0,29,304	0/0:24,0:23:62.92:0,63,622	0/0:33,0:33:93.43:0,93,852	0/1:20,1:19:14.91:105,0,15	0/0:6,0:4:11.89:0,12,104
chr10	50112532	.	C	CT	701.49	PASS	AB=0.977;AC=10;AF=0.192;AN=52;BaseQRankSum=2.355;DP=505;FS=20.490;HRun=9;HaplotypeScore=85.6731;InbreedingCoeff=0.7080;MQ=40.10;MQ0=42;MQRankSum=-3.655;QD=5.75;ReadPosRankSum=-1.752;VQSLOD=-0.0828;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:18.23:0,18,319	0/0:5,0:5:8.98:0,9,77	./.	0/1:11,0:2:0:0,0,0	0/0:21,0:20:26.97:0,27,234	0/0:26,0:26:49.82:0,50,404	0/0:24,0:22:17.88:0,18,287	1/1:22,9:22:24.06:265,24,0	0/0:9,0:9:14.96:0,15,125	0/0:15,0:15:20.96:0,21,180	0/0:15,0:15:16.86:0,17,132	0/0:21,0:17:6.60:0,7,188	0/0:15,0:13:20.66:0,21,181	0/0:16,0:16:8.62:0,9,78	0/0:16,0:13:20.97:0,21,181	0/0:23,0:22:32.72:0,33,286	0/0:37,0:30:38.71:0,39,327	0/0:21,0:21:34.97:0,35,292	1/1:15,5:17:1.91:240,2,0	1/1:12,10:19:18.05:198,18,0	./.	0/0:11,0:11:14.98:0,15,130	0/0:18,0:17:20.79:0,21,182	0/0:17,0:15:12.78:0,13,126	0/1:20,1:20:3.19:3,0,204	0/0:23,1:24:5.92:0,6,279	1/1:9,8:15:14.14:138,14,0	0/0:7,0:4:8.99:0,9,75
chr10	50113572	.	G	GAC	613.58	PASS	AB=0.949;AC=8;AF=0.143;AN=56;BaseQRankSum=13.274;DP=1007;FS=1.558;HRun=0;HaplotypeScore=184.8310;InbreedingCoeff=0.1355;MQ=53.78;MQ0=10;MQRankSum=-11.501;QD=1.82;ReadPosRankSum=-9.913;VQSLOD=0.2829;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:47,0:47:14.08:14,0,430	0/0:19,0:19:51.16:0,51,673	0/0:40,0:20:48.02:0,48,578	0/0:57,0:34:63.15:0,63,801	0/0:27,0:27:75.23:0,75,994	0/0:30,0:30:78.24:0,78,1035	0/0:37,0:37:99:0,100,1251	0/1:62,2:57:99:130,0,438	0/0:36,0:36:84.28:0,84,1131	0/0:42,0:42:99:0,117,1544	0/0:20,0:20:51.17:0,51,685	0/0:34,0:34:87.25:0,87,1135	0/0:44,0:44:99:0,126,1667	0/0:33,0:33:93.31:0,93,1252	0/0:30,0:30:78.26:0,78,1050	0/1:36,0:36:55.08:55,0,193	0/0:34,0:34:87.08:0,87,1171	0/0:29,0:29:55.03:0,55,902	0/1:42,3:44:99:226,0,464	1/1:46,9:55:41.86:206,42,0	0/1:39,4:41:14.74:17,0,15	0/0:22,0:22:66.12:0,66,831	0/0:31,0:31:84.26:0,84,1118	0/0:37,0:37:93.26:0,93,1228	0/0:32,0:32:81.11:0,81,1060	0/0:28,0:28:78.25:0,78,1037	0/1:40,7:47:87.96:107,0,88	0/0:8,0:8:24.07:0,24,313
chr10	50113578	.	C	CAGAT	864.87	PASS	AB=0.988;AC=7;AF=0.125;AN=56;BaseQRankSum=14.141;DP=977;FS=0.952;HRun=0;HaplotypeScore=206.6549;InbreedingCoeff=0.1792;MQ=53.81;MQ0=6;MQRankSum=-11.517;QD=3.06;ReadPosRankSum=-7.775;VQSLOD=-0.4940;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:49,0:49:99:104,0,726	0/0:20,0:20:57.17:0,57,1139	0/0:40,0:24:69.15:0,69,1255	0/0:48,0:30:76.83:0,77,1497	0/0:32,0:32:90.19:0,90,1665	0/0:31,0:31:87.30:0,87,1771	0/0:37,0:37:99:0,99,1978	0/1:57,2:52:99:295,0,847	0/0:30,0:30:87.30:0,87,1804	0/0:41,0:41:99:0,120,2491	0/0:19,0:19:57.18:0,57,1126	0/0:37,0:37:99:0,99,1884	0/0:44,0:44:99:0,129,2660	0/0:33,0:33:96.33:0,96,1987	0/0:29,0:29:84.26:0,84,1684	0/1:37,0:37:99:168,0,278	0/0:31,0:31:90.24:0,90,1848	0/0:26,0:26:55.21:0,55,1406	0/1:37,1:38:23.94:24,0,932	1/1:55,0:55:17.62:262,18,0	0/0:39,1:38:26.76:0,27,324	0/0:23,0:23:68:0,68,1307	0/0:30,0:30:87.30:0,87,1802	0/0:36,0:36:99:0,99,1944	0/0:28,0:29:84.23:0,84,1728	0/0:28,0:28:81.23:0,81,1653	0/1:45,0:45:99:147,0,184	0/0:9,0:9:27.09:0,27,529
chr10	50113583	.	A	ACACATGCACT	3757.94	PASS	AB=0.883;AC=7;AF=0.125;AN=56;BaseQRankSum=4.399;DP=964;FS=30.750;HRun=0;HaplotypeScore=302.0851;InbreedingCoeff=0.4190;MQ=54.40;MQ0=4;MQRankSum=-10.341;QD=15.79;ReadPosRankSum=-4.183;VQSLOD=0.9824;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:12,32:50:2.05:0,2,93	0/0:21,0:21:51.16:0,51,1353	0/0:38,0:23:45.15:0,45,1124	0/0:40,0:28:46.46:0,46,1320	0/0:32,0:32:85.52:0,86,2277	0/0:33,0:33:93.27:0,93,2491	0/0:35,0:35:76.56:0,77,1786	0/1:56,0:49:99:1029,0,107	0/0:30,0:30:81.26:0,81,2342	0/0:41,0:41:99:0,111,3075	0/0:20,0:20:54.15:0,54,1471	0/0:34,0:34:73.79:0,74,1869	0/0:44,0:44:99:0,123,3449	0/0:34,0:34:87.26:0,87,2366	0/0:29,0:29:75.23:0,75,2095	1/1:4,31:39:15.05:667,15,0	0/0:30,0:30:72.25:0,72,2180	0/0:24,0:24:57.15:0,57,1617	0/1:38,0:38:62.97:968,0,63	1/1:27,30:57:10.05:269,10,0	0/0:39,0:38:2.90:0,3,49	0/0:21,0:21:57.17:0,57,1659	0/0:31,0:31:87.20:0,87,2384	0/0:30,0:30:75.20:0,75,1980	0/0:29,0:29:81.26:0,81,2327	0/0:28,0:28:63.21:0,63,1820	0/1:22,21:48:17.23:825,0,17	0/0:12,0:12:33.05:0,33,779
chr10	50114008	.	G	GT	1728.41	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=7.993;DP=607;FS=2.548;HRun=6;HaplotypeScore=97.1729;InbreedingCoeff=0.9914;MQ=73.63;MQ0=3;MQRankSum=-12.213;QD=16.31;ReadPosRankSum=-0.483;VQSLOD=3.3236;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:35:85.74:0,86,861	0/0:14,0:14:36.08:0,36,367	0/0:16,0:14:26.91:0,27,242	0/0:27,0:24:30.30:0,30,422	0/0:37,0:37:99:0,99,996	0/0:25,0:25:69.15:0,69,704	0/0:27,0:27:74.18:0,74,734	1/1:18,8:26:54.99:467,55,0	0/0:17,0:17:51.12:0,51,520	0/0:28,0:28:81.18:0,81,826	0/0:17,0:17:42.09:0,42,428	0/0:21,0:21:51.11:0,51,520	0/0:17,0:17:45.10:0,45,458	0/0:16,0:16:33.06:0,33,334	0/0:21,0:21:60.13:0,60,612	0/0:22,0:21:57.13:0,57,582	0/0:25,0:25:72.10:0,72,716	0/0:21,0:20:57.13:0,57,582	1/1:10,9:19:38.06:385,38,0	1/1:14,4:18:41.57:303,42,0	1/1:3,2:5:11.56:100,12,0	0/0:11,0:11:33.07:0,33,336	0/0:27,0:26:66.12:0,66,660	0/0:21,0:21:57.13:0,57,582	0/0:25,0:24:69.13:0,69,696	0/0:20,0:20:60.14:0,60,612	1/1:33,5:37:98.75:647,99,0	0/0:11,0:11:33.08:0,33,337
chr10	50114009	.	TTTTTTG	T	4395.75	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=7.714;DP=604;FS=3.850;HRun=0;HaplotypeScore=149.9724;InbreedingCoeff=0.9924;MQ=73.69;MQ0=3;MQRankSum=-10.911;QD=42.68;ReadPosRankSum=-0.101;VQSLOD=4.8705;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:88.53:0,89,2635	0/0:12,0:12:36.11:0,36,993	0/0:17,0:14:30.01:0,30,501	0/0:27,0:24:30.32:0,30,761	0/0:37,0:37:99:0,99,2731	0/0:24,0:24:69.22:0,69,1926	0/0:27,0:27:75.09:0,75,2245	1/1:15,9:24:57.17:907,57,0	0/0:18,0:18:54.18:0,54,1636	0/0:28,0:28:84.26:0,84,2258	0/0:17,0:17:42.14:0,42,1240	0/0:20,0:20:54.18:0,54,1713	0/0:17,0:17:51.16:0,51,1398	0/0:17,0:17:42.14:0,42,1375	0/0:21,0:21:60.19:0,60,1830	0/0:22,0:21:57.05:0,57,1646	0/0:25,0:25:72.18:0,72,1824	0/0:22,0:21:60.19:0,60,1658	1/1:14,4:19:39.13:580,39,0	1/1:6,11:17:45.15:792,45,0	1/1:3,2:5:12.04:197,12,0	0/0:11,0:11:33.10:0,33,910	0/0:28,0:27:69.18:0,69,1833	0/0:20,0:20:60.21:0,60,2011	0/0:26,0:25:75.22:0,75,2115	0/0:20,0:20:60.19:0,60,1639	1/1:11,27:37:99:1919,105,0	0/0:11,0:11:33.10:0,33,859
chr10	50114022	.	GTTTTTTGTT	G	4677.90	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=13.001;DP=593;FS=11.049;HRun=0;HaplotypeScore=184.3663;InbreedingCoeff=0.9818;MQ=67.51;MQ0=4;MQRankSum=-11.927;QD=60.75;ReadPosRankSum=-0.422;VQSLOD=3.8573;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:34:94.50:0,95,3161	0/0:12,0:12:33.11:0,33,1261	0/0:22,0:17:27.82:0,28,914	0/0:24,0:18:33.03:0,33,742	0/0:35,0:35:96.32:0,96,3757	0/0:26,0:26:66.20:0,66,2611	0/0:27,0:27:73.49:0,73,3111	1/1:8,9:17:45.79:863,46,0	0/0:19,0:19:54.18:0,54,2324	0/0:28,0:28:75.25:0,75,2915	0/0:18,0:18:51.17:0,51,1971	0/0:22,0:22:66.23:0,66,2418	0/0:18,0:18:51.17:0,51,2089	0/0:17,0:17:51.17:0,51,2066	0/0:20,0:20:60.21:0,60,2508	0/0:26,0:25:65.82:0,66,2104	0/0:25,0:25:60.19:0,60,2451	0/0:22,0:21:57.19:0,57,2198	1/1:6,4:10:27.41:447,27,0	1/1:4,11:15:45.05:947,45,0	1/1:2,2:4:7.92:178,8,0	0/0:14,0:14:39.13:0,39,1357	0/0:28,0:27:72.24:0,72,2848	0/0:23,0:23:69.24:0,69,2887	0/0:26,0:25:69.24:0,69,2731	0/0:20,0:20:57.19:0,57,2298	1/1:4,27:31:93.17:2243,93,0	0/0:10,0:10:24.08:0,24,968
chr10	50114028	.	TG	T	1087.36	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=13.167;DP=589;FS=14.231;HRun=1;HaplotypeScore=98.8893;InbreedingCoeff=0.9867;MQ=68.39;MQ0=4;MQRankSum=-10.315;QD=13.94;ReadPosRankSum=-0.587;VQSLOD=1.6890;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:19.02:0,19,369	0/0:12,0:12:36.07:0,36,402	0/0:24,0:19:31.25:0,31,407	0/0:20,0:15:21.94:0,22,297	0/0:34,0:34:99:0,102,1147	0/0:25,0:25:72.13:0,72,815	0/0:27,0:27:59.38:0,59,876	1/1:9,7:16:45.66:306,46,0	0/0:22,0:22:66.14:0,66,747	0/0:26,0:26:78.17:0,78,898	0/0:19,0:19:57.04:0,57,651	0/0:22,0:22:66.15:0,66,758	0/0:19,0:19:52.06:0,52,626	0/0:20,0:20:60.13:0,60,685	0/0:21,0:21:63.17:0,63,746	0/0:25,0:24:62.78:0,63,352	0/0:21,0:21:63.17:0,63,747	0/0:21,0:20:63.03:0,63,681	1/1:5,6:11:31.24:209,31,0	1/1:11,5:16:45.69:258,46,0	1/1:2,2:4:10.38:51,10,0	0/0:15,0:15:45.10:0,45,515	0/0:27,0:26:53.61:0,54,825	0/0:24,0:24:72.13:0,72,813	0/0:25,0:24:72.16:0,72,821	0/0:20,0:20:60.16:0,60,699	1/1:27,4:31:87.56:436,88,0	0/0:8,0:8:24.01:0,24,251
chr10	50114029	.	G	GT	1293.85	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-8.199;DP=593;FS=1.877;HRun=9;HaplotypeScore=99.9992;InbreedingCoeff=0.9097;MQ=68.23;MQ0=4;MQRankSum=2.491;QD=22.70;ReadPosRankSum=-0.201;VQSLOD=3.6364;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,24:32:77.55:818,78,0	0/0:12,0:12:29.97:0,30,256	0/0:24,0:19:32.36:0,32,318	0/0:19,0:14:23.02:0,23,184	0/0:33,1:34:56.81:0,57,722	0/0:25,0:25:62.75:0,63,542	0/0:27,0:27:50.82:0,51,572	0/0:16,0:16:22.24:0,22,61	0/0:22,0:22:62.97:0,63,543	0/0:26,0:26:62.97:0,63,547	0/0:20,0:20:53.98:0,54,468	0/0:22,0:22:53.99:0,54,469	0/0:19,0:19:52.97:0,53,441	0/0:20,0:20:56.99:0,57,495	0/0:22,0:22:56.97:0,57,495	1/1:4,21:24:53.98:597,54,0	0/0:20,0:20:59.97:0,60,517	0/0:21,0:20:50.98:0,51,442	0/0:10,0:11:15.47:0,15,43	0/0:19,0:19:25.45:0,25,70	0/0:4,0:4:4.02:0,4,11	0/0:15,0:15:41.97:0,42,361	0/0:28,0:27:44.70:0,45,542	0/0:24,0:24:56.97:0,57,494	0/0:25,0:24:59.96:0,60,514	0/0:20,0:20:47.94:0,48,409	0/0:32,0:32:55.32:0,55,155	0/0:8,0:8:11.98:0,12,104
chr10	50114315	.	AT	A	1889.34	PASS	AB=0.913;AC=12;AF=0.214;AN=56;BaseQRankSum=10.000;DP=551;FS=7.195;HRun=10;HaplotypeScore=56.7162;InbreedingCoeff=0.8552;MQ=71.26;MQ0=1;MQRankSum=-0.693;QD=15.24;ReadPosRankSum=-2.147;VQSLOD=3.0342;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:84.19:0,84,911	0/0:15,0:15:36.10:0,36,397	0/0:10,0:8:11.85:0,12,164	0/1:14,1:14:2.04:2,0,184	0/0:32,0:32:84.20:0,84,910	0/0:22,0:22:66.18:0,66,730	0/0:13,0:13:33.09:0,33,365	1/1:8,19:27:50.80:423,51,0	0/0:21,0:21:48.11:0,48,521	0/0:16,0:17:50.97:0,51,545	0/0:16,1:17:25.08:0,25,505	0/0:11,0:11:24.06:0,24,266	0/0:20,0:20:57.12:0,57,613	0/0:20,0:20:51.14:0,51,564	0/0:19,0:20:56.99:0,57,612	0/0:22,0:22:60.14:0,60,648	0/0:21,0:21:57.13:0,57,619	0/0:27,0:27:72.15:0,72,783	1/1:0,21:21:62.01:523,62,0	1/1:0,21:21:59.85:510,60,0	1/1:1,7:9:20.95:182,21,0	0/0:19,0:21:56.95:0,57,598	0/0:23,0:24:61.23:0,61,640	0/0:19,1:20:34.09:0,34,595	0/0:20,0:20:60.15:0,60,655	0/0:18,0:18:45.12:0,45,498	1/1:2,20:23:50:423,50,0	0/1:7,1:8:1.99:2,0,208
chr10	50114902	.	ATGTCTC	A	1044.80	PASS	AB=0.887;AC=22;AF=0.440;AN=50;BaseQRankSum=6.436;DP=507;FS=10.668;HRun=0;HaplotypeScore=115.3179;InbreedingCoeff=0.6126;MQ=59.35;MQ0=7;MQRankSum=-4.600;QD=4.35;ReadPosRankSum=-0.493;VQSLOD=1.0987;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:30:1.25:3,1,0	0/0:9,0:9:15.05:0,15,432	0/0:34,0:16:6.02:0,6,161	0/1:21,0:11:4.13:4,0,74	0/0:21,0:21:42.14:0,42,1174	./.	1/1:7,10:17:3.01:61,3,0	1/1:31,0:31:3:25,3,0	0/0:8,0:8:12.04:0,12,382	0/0:22,0:22:36.11:0,36,966	0/0:10,0:10:12.02:0,12,291	1/1:11,1:12:21.07:433,21,0	1/1:4,11:15:3.01:55,3,0	0/0:10,0:10:18.05:0,18,497	0/0:19,0:19:30.10:0,30,882	1/1:19,0:19:9.01:107,9,0	0/0:26,0:26:39.13:0,39,1164	0/0:14,0:14:27.04:0,27,652	1/1:13,0:13:18.04:223,18,0	1/1:16,0:15:3.01:33,3,0	0/1:12,0:11:0:0,0,0	./.	0/1:7,10:16:0.03:0,0,0	./.	0/0:15,0:15:33.10:0,33,757	0/1:10,1:11:34.51:35,0,641	1/1:26,0:26:20.89:231,21,0	0/0:13,0:13:11.95:0,12,159
chr10	50114922	.	GTCTCTGTCTCTGTC	G	2600.80	PASS	AB=0.611;AC=13;AF=0.232;AN=56;BaseQRankSum=5.172;DP=494;FS=28.584;HRun=0;HaplotypeScore=155.5095;InbreedingCoeff=0.7696;MQ=48.02;MQ0=31;MQRankSum=-7.780;QD=18.85;ReadPosRankSum=-2.578;VQSLOD=1.0024;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:25:3.01:69,3,0	0/0:7,0:7:18.06:0,18,997	0/0:22,0:7:20.55:0,21,441	0/0:15,0:5:8.98:0,9,226	0/0:17,0:17:45.14:0,45,2563	0/0:23,0:23:2.36:0,2,10	0/0:19,0:17:7.36:0,7,56	1/1:36,0:34:80.31:690,80,0	0/0:12,0:11:24.29:0,24,988	0/0:22,0:19:54.06:0,54,2387	0/0:16,0:14:27.07:0,27,790	0/0:17,0:17:31.45:0,31,559	0/0:19,0:19:9.84:0,10,304	0/0:8,0:8:24.07:0,24,1194	0/0:21,0:20:37.59:0,38,1914	1/1:19,0:19:9.03:286,9,0	0/0:25,0:23:51.12:0,51,2669	0/0:17,0:15:33.11:0,33,1663	1/1:4,7:9:21.04:671,21,0	1/1:4,11:14:5.95:132,6,0	0/1:4,7:9:0:0,0,0	0/0:15,0:14:2.99:0,3,24	0/0:15,0:12:0.26:0,0,1	0/0:25,0:22:12.02:0,12,187	0/0:16,0:15:39.13:0,39,1874	0/0:16,0:16:48.06:0,48,1947	1/1:6,12:18:33.09:918,33,0	0/0:9,0:9:18.01:0,18,441
chr10	50114927	.	TGTCTCTGTCTCTCTCTCTCTCACACACACACACACA	T	3127.24	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=7.121;DP=487;FS=9.159;HRun=0;HaplotypeScore=276.0235;InbreedingCoeff=0.4420;MQ=47.10;MQ0=36;MQRankSum=-6.373;QD=30.07;ReadPosRankSum=3.442;VQSLOD=0.9487;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:3,25:25:3.01:215,3,0	0/0:6,0:6:18.06:0,18,1622	0/0:17,0:7:21.07:0,21,779	0/0:13,0:3:9.03:0,9,399	0/0:19,0:19:51.16:0,51,4592	0/0:22,0:22:9.03:0,9,790	0/0:19,0:17:8.15:0,8,159	0/0:37,0:35:62.51:0,63,619	0/0:12,0:11:24.70:0,25,2157	0/0:23,0:19:57.19:0,57,4514	0/0:17,0:15:27.08:0,27,2317	0/1:17,0:17:54.16:54,0,2085	0/0:17,0:17:21.07:0,21,1704	0/0:9,0:8:24.08:0,24,2049	0/0:20,0:19:39.13:0,39,3351	1/1:0,19:19:9.03:838,9,0	0/0:28,0:25:60.21:0,60,5539	0/0:15,0:13:36.12:0,36,3111	0/1:9,0:7:11.22:573,0,11	0/1:14,0:13:29.81:208,0,30	0/0:12,0:8:0:0,0,0	0/0:15,0:14:3.01:0,3,95	0/0:17,0:14:3.22:0,3,131	0/0:24,0:20:11.15:0,11,971	0/0:16,0:15:39.13:0,39,3894	0/0:17,0:17:51.18:0,51,4468	1/1:17,0:17:32.66:1382,33,0	0/0:8,0:8:18.06:0,18,789
chr10	50114932	.	CTG	C	393.38	PASS	AB=0.954;AC=20;AF=0.370;AN=54;BaseQRankSum=9.803;DP=471;FS=7.818;HRun=0;HaplotypeScore=93.9805;InbreedingCoeff=0.3656;MQ=46.99;MQ0=36;MQRankSum=-4.732;QD=1.57;ReadPosRankSum=0.980;VQSLOD=1.2246;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:26:0.47:1,0,0	0/0:5,1:6:13.86:0,14,211	0/0:8,0:3:5.96:0,6,44	0/1:10,0:2:5.76:6,0,22	0/0:18,0:18:47.70:0,48,648	1/1:22,1:23:8.24:48,8,0	0/1:19,0:17:19.43:19,0,43	0/1:33,0:31:3.81:33,0,4	0/1:8,3:10:21.47:21,0,210	0/0:25,0:21:60.81:0,61,761	0/0:17,0:15:24.06:0,24,387	0/1:17,1:18:79.95:156,0,80	0/0:17,0:17:3.35:0,3,222	0/0:9,0:8:21.06:0,21,317	0/1:16,2:17:11.72:12,0,475	1/1:19,0:19:7.50:33,7,0	0/0:28,0:25:45.13:0,45,795	0/0:14,0:12:33.02:0,33,443	1/1:10,0:7:16.53:82,17,0	1/1:14,0:13:2.37:8,2,0	0/1:12,0:7:0:0,0,0	./.	0/1:18,0:15:0.05:0,0,0	0/0:23,0:19:9:0,9,128	0/0:18,0:17:17.63:0,18,514	0/0:17,0:17:28.05:0,28,663	1/1:17,0:17:28.63:135,29,0	0/0:5,0:5:11.95:0,12,112
chr10	50114934	.	GTC	G	745.37	PASS	AB=1.000;AC=14;AF=0.259;AN=54;BaseQRankSum=8.812;DP=478;FS=7.980;HRun=0;HaplotypeScore=94.5539;InbreedingCoeff=0.5367;MQ=47.28;MQ0=36;MQRankSum=-6.963;QD=5.29;ReadPosRankSum=0.306;VQSLOD=1.6044;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:26:2.96:19,3,0	0/1:6,0:6:6.85:7,0,121	./.	0/0:9,0:2:1.25:0,1,3	0/0:19,0:19:44.94:0,45,408	0/0:23,0:23:5.26:0,5,26	0/0:21,0:19:1.91:0,2,89	1/1:29,0:27:65.18:434,65,0	0/0:12,0:11:19.05:0,19,148	0/0:30,0:26:60.70:0,61,574	0/0:16,0:14:21.04:0,21,294	0/1:17,0:17:73.95:87,0,74	0/0:18,0:18:11.79:0,12,233	0/0:9,0:8:20.98:0,21,197	0/0:19,0:18:16.11:0,16,303	1/1:19,0:19:8.66:50,9,0	0/0:28,0:25:56.35:0,56,574	0/0:13,0:11:21.01:0,21,226	1/1:10,0:7:17.74:117,18,0	1/1:12,2:13:2.98:22,3,0	0/0:12,0:7:0:0,0,0	0/0:17,0:16:2.37:0,2,8	0/0:19,0:16:2.94:0,3,24	0/0:23,0:19:9.03:0,9,130	0/0:18,0:17:5.12:0,5,296	0/0:18,0:18:40.24:0,40,488	1/1:13,4:17:25.46:169,25,0	0/0:5,0:5:2.99:0,3,24
chr10	50114962	.	CACACACACACACACACACACACACACACACAT	C	2952.53	PASS	AB=0.838;AC=8;AF=0.154;AN=52;BaseQRankSum=10.121;DP=525;FS=2.209;HRun=0;HaplotypeScore=304.9026;InbreedingCoeff=0.5531;MQ=46.13;MQ0=43;MQRankSum=-2.424;QD=30.13;ReadPosRankSum=-1.421;VQSLOD=2.0818;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:27:2.96:0,3,19	0/0:6,0:6:15.05:0,15,1180	0/0:5,0:1:3.01:0,3,288	./.	0/0:24,0:24:51.18:0,51,4954	0/0:23,0:23:22.83:0,23,2494	0/0:22,0:20:27.09:0,27,3399	0/1:24,22:44:99:449,0,144	0/0:15,0:13:24.97:0,25,3247	0/0:27,0:22:66.15:0,66,6292	0/0:20,0:17:34:0,34,4304	0/0:18,0:17:30.10:0,30,3107	0/0:18,0:18:33.07:0,33,3703	0/0:13,0:12:27.02:0,27,2843	0/0:20,0:19:36.11:0,36,3767	0/1:20,0:20:99:128,0,427	0/0:32,0:29:75.22:0,75,6888	0/0:17,0:14:42.10:0,42,4101	1/1:5,2:5:13.61:528,14,0	1/1:8,3:11:3.01:247,3,0	./.	0/0:23,0:20:21.07:0,21,2697	0/0:22,0:20:17.41:0,17,2368	0/0:23,0:19:24.06:0,24,3050	0/0:16,0:15:39.13:0,39,4421	0/0:25,0:24:69.24:0,69,7099	1/1:7,7:14:23.95:1741,24,0	0/0:6,0:6:15.05:0,15,1158
chr10	50115167	.	CA	C	3926.19	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=9.514;DP=588;FS=1.315;HRun=1;HaplotypeScore=59.6884;InbreedingCoeff=0.9997;MQ=84.30;MQ0=0;MQRankSum=-0.333;QD=36.69;ReadPosRankSum=-0.959;VQSLOD=3.5143;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,141,2130	0/0:12,0:12:36.10:0,36,519	0/0:19,0:19:52.35:0,52,656	0/0:20,0:20:41.59:0,42,706	0/0:22,0:22:63.18:0,63,919	0/0:19,0:19:57.14:0,57,806	0/0:13,0:13:39.13:0,39,597	1/1:0,29:29:81.24:1096,81,0	0/0:23,0:23:66.21:0,66,986	0/0:17,0:17:51.17:0,51,763	0/0:21,0:21:63.16:0,63,870	0/0:21,0:21:63.19:0,63,921	0/0:14,0:14:39.13:0,39,597	0/0:15,0:15:39.10:0,39,553	0/0:25,0:25:75.21:0,75,1078	0/0:28,0:28:84.29:0,84,1281	0/0:30,0:30:90.29:0,90,1353	0/0:17,0:17:45.10:0,45,621	1/1:0,22:22:66.18:870,66,0	1/1:0,20:20:54.18:745,54,0	1/1:0,22:22:57.19:796,57,0	0/0:15,0:15:45.13:0,45,646	0/0:22,0:22:63.20:0,63,938	0/0:20,0:20:60.17:0,60,874	0/0:16,0:16:48.16:0,48,735	0/0:28,0:28:84.28:0,84,1259	1/1:0,14:14:30.10:418,30,0	0/0:13,0:13:33.11:0,33,505
chr10	50115406	.	ATT	A	3605.98	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=11.662;DP=491;FS=11.744;HRun=8;HaplotypeScore=58.4797;InbreedingCoeff=0.9871;MQ=71.13;MQ0=0;MQRankSum=0.275;QD=30.82;ReadPosRankSum=-2.381;VQSLOD=1.8807;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:96.29:0,96,1593	0/0:10,0:10:30.07:0,30,475	0/0:8,0:8:20.62:0,21,272	0/0:6,0:6:13.29:0,13,165	0/0:22,0:22:63.21:0,63,1041	0/0:22,0:22:63.21:0,63,1041	0/0:5,0:5:15:0,15,222	1/1:3,40:43:99:1414,118,0	0/0:11,0:11:33.11:0,33,558	0/0:16,0:16:42.14:0,42,708	0/0:23,0:23:66.14:0,66,1054	0/0:10,0:10:27.06:0,27,427	0/0:14,0:14:39.13:0,39,658	0/0:18,0:18:54.18:0,54,913	0/0:20,0:20:60.21:0,60,1015	0/0:23,0:23:63.20:0,63,1040	0/0:23,0:23:60.17:0,60,962	0/0:27,0:27:78.25:0,78,1292	1/1:3,14:17:42.12:512,42,0	1/1:1,24:25:63.18:765,63,0	1/1:0,9:9:21.07:256,21,0	0/0:9,0:9:21.07:0,21,355	0/0:23,0:23:63.15:0,63,1005	0/0:10,0:10:27.09:0,27,447	0/0:12,0:12:33.11:0,33,549	0/0:20,0:20:51.12:0,51,785	1/1:2,21:23:54.17:659,54,0	0/0:10,0:10:30.10:0,30,507
chr10	50115607	.	AC	A	3183.83	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=5.955;DP=556;FS=0.000;HRun=5;HaplotypeScore=61.0319;InbreedingCoeff=0.9977;MQ=81.52;MQ0=0;MQRankSum=-3.589;QD=27.93;ReadPosRankSum=-0.459;VQSLOD=3.2458;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:90.29:0,90,1214	0/0:7,0:7:18.05:0,18,230	0/0:22,0:22:63.19:0,63,837	0/0:16,0:16:46.70:0,47,610	0/0:26,0:26:69.22:0,69,926	0/0:17,0:17:45.15:0,45,614	0/0:17,0:17:51.17:0,51,697	1/1:1,25:26:75.17:821,75,0	0/0:10,0:10:30.10:0,30,409	0/0:30,0:30:90.29:0,90,1217	0/0:18,0:18:51.16:0,51,680	0/0:12,0:12:33.11:0,33,450	0/0:19,0:19:57.15:0,57,757	0/0:22,0:22:63.21:0,63,856	0/0:22,0:22:63.17:0,63,839	0/0:19,0:19:51.17:0,51,681	0/0:13,0:13:33.11:0,33,448	0/0:21,0:21:63.15:0,63,822	1/1:4,13:17:42.11:467,42,0	1/1:3,22:25:72.20:813,72,0	1/1:1,22:23:54.15:612,54,0	0/0:11,0:11:30.10:0,30,410	0/0:19,0:19:57.19:0,57,767	0/0:15,0:15:42.14:0,42,572	0/0:22,0:22:63.18:0,63,815	0/0:23,0:23:69.23:0,69,943	1/1:2,21:23:57.16:646,57,0	0/0:29,0:29:78.25:0,78,1066
chr10	50115867	.	GAAAAA	G	1628.62	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=7.968;DP=491;FS=20.746;HRun=12;HaplotypeScore=107.7320;InbreedingCoeff=0.9235;MQ=76.96;MQ0=1;MQRankSum=-6.846;QD=27.14;ReadPosRankSum=-0.798;VQSLOD=0.3592;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:22:60.07:0,60,1410	0/0:5,0:5:9.03:0,9,225	0/0:41,0:26:48.98:0,49,859	0/0:24,0:14:17.99:0,18,272	0/0:22,0:25:69.24:0,69,1858	0/0:16,0:18:54.19:0,54,1495	0/0:12,0:14:42.14:0,42,1139	1/1:6,5:11:14.99:215,15,0	0/0:10,0:12:33.11:0,33,874	0/0:14,0:16:45.15:0,45,1287	0/0:23,0:24:66.22:0,66,1799	0/0:17,0:17:42.14:0,42,1230	0/0:12,0:12:30.10:0,30,880	0/0:12,0:13:30.10:0,30,809	0/0:13,0:16:48.16:0,48,1303	0/0:14,0:14:42.08:0,42,1025	0/0:19,0:20:57.20:0,57,1636	0/0:22,0:23:66.23:0,66,1858	1/1:6,2:8:8.99:155,9,0	1/1:3,16:20:51.14:899,51,0	1/1:7,1:8:2.91:21,3,0	0/0:16,0:16:36.12:0,36,1039	0/0:19,0:19:51.17:0,51,1420	0/0:15,0:15:36.12:0,36,1006	0/0:22,0:22:60.21:0,60,1715	0/0:26,0:27:69.24:0,69,1988	1/1:3,10:12:30.06:501,30,0	0/0:16,0:16:45.15:0,45,1266
chr10	50115939	.	GA	G	4568.41	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=8.859;DP=505;FS=2.227;HRun=4;HaplotypeScore=67.0385;InbreedingCoeff=0.9939;MQ=77.52;MQ0=1;MQRankSum=-2.034;QD=31.51;ReadPosRankSum=-1.916;VQSLOD=4.5247;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,22:24:66.17:775,66,0	0/0:15,0:15:45.15:0,45,629	0/0:19,0:19:53.49:0,53,728	0/0:10,0:9:15.05:0,15,210	0/0:26,0:26:72.20:0,72,969	0/0:11,0:11:30.10:0,30,405	0/0:14,0:14:42.12:0,42,569	1/1:2,26:28:75.21:876,75,0	0/0:20,0:20:57.18:0,57,772	0/0:16,0:16:42.14:0,42,588	0/0:18,0:18:54.18:0,54,754	0/0:15,0:15:45.11:0,45,594	0/0:17,0:17:51.17:0,51,713	0/0:13,0:13:36.12:0,36,504	0/0:23,0:23:66.22:0,66,915	1/1:0,22:22:60.18:720,60,0	0/0:20,0:20:54.17:0,54,740	0/0:20,0:20:54.18:0,54,753	1/1:1,13:14:39.12:468,39,0	1/1:1,26:27:72.21:847,72,0	1/1:2,9:11:27.08:324,27,0	0/0:22,0:22:63.21:0,63,871	0/0:20,0:20:54.15:0,54,714	0/0:16,0:16:45.15:0,45,630	0/0:23,0:23:69.21:0,69,932	0/0:16,0:16:42.14:0,42,588	1/1:3,16:19:48.13:560,48,0	0/0:5,0:5:15.05:0,15,210
chr10	50115987	.	A	AG	1164.48	PASS	AB=0.921;AC=7;AF=0.125;AN=56;BaseQRankSum=6.813;DP=602;FS=12.393;HRun=0;HaplotypeScore=114.8620;InbreedingCoeff=0.4426;MQ=71.30;MQ0=3;MQRankSum=-4.110;QD=11.20;ReadPosRankSum=-0.252;VQSLOD=3.2962;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:84.55:0,85,842	0/0:14,0:14:38.76:0,39,320	0/0:36,0:19:15.69:0,16,158	0/0:31,0:17:13.18:0,13,158	0/0:29,0:29:75.19:0,75,644	0/0:12,0:12:30.95:0,31,285	0/0:12,0:12:32.95:0,33,306	1/1:21,2:23:29.97:478,30,0	0/0:21,0:21:53.79:0,54,556	0/0:27,0:26:71:0,71,672	0/0:28,0:28:62.38:0,62,605	0/0:10,0:10:28.85:0,29,297	0/0:26,0:26:68.84:0,69,760	0/0:16,0:16:43.50:0,44,411	0/0:21,0:21:62.07:0,62,624	0/0:23,0:23:64.36:0,64,727	0/0:19,0:19:43.28:0,43,465	0/0:23,0:23:62.34:0,62,607	0/1:16,0:16:42.91:144,0,43	1/1:20,8:28:1.94:363,2,0	0/1:13,2:15:33.31:126,0,33	0/0:21,0:21:59.42:0,59,576	0/0:17,0:17:40.50:0,41,386	0/0:24,0:24:65.82:0,66,702	0/0:16,0:16:46.81:0,47,441	0/0:25,0:25:67.46:0,67,720	0/1:19,3:21:8.26:186,0,8	0/0:13,0:13:36.89:0,37,377
chr10	50115998	.	A	AAAAAC	1876.71	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=1.880;DP=575;FS=11.206;HRun=0;HaplotypeScore=128.1037;InbreedingCoeff=0.9090;MQ=69.66;MQ0=5;MQRankSum=-5.002;QD=19.97;ReadPosRankSum=-1.881;VQSLOD=2.6009;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:59.13:0,59,731	0/0:14,0:14:26.68:0,27,238	0/0:42,0:20:1.46:0,1,102	0/0:33,0:17:6.37:0,6,146	0/0:29,0:29:42.10:0,42,534	0/0:13,0:13:34.24:0,34,358	0/0:10,0:10:27.01:0,27,306	1/1:21,0:21:50.41:384,50,0	0/0:22,0:22:59.91:0,60,699	0/0:21,0:20:40.58:0,41,401	0/0:23,0:23:54.26:0,54,518	0/0:15,0:15:36.03:0,36,402	0/0:25,0:25:62.95:0,63,812	0/0:15,0:15:42.03:0,42,520	0/0:19,0:19:47.87:0,48,555	0/0:22,0:22:54.22:0,54,766	0/0:16,0:16:41.91:0,42,520	0/0:21,0:21:54.09:0,54,671	1/1:14,0:14:23.22:225,23,0	1/1:17,7:25:61.30:836,61,0	1/1:11,1:13:24.35:210,24,0	0/0:19,0:19:43.73:0,44,505	0/0:16,0:16:35.83:0,36,333	0/0:23,0:23:57.07:0,57,749	0/0:13,0:13:7.03:0,7,265	0/0:29,0:29:81.02:0,81,931	1/1:17,1:20:29.68:396,30,0	0/0:10,0:10:21.53:0,22,316
chr10	50119185	.	C	CAAAAAA	3224.03	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=0.621;DP=643;FS=4.150;HRun=9;HaplotypeScore=137.8854;InbreedingCoeff=0.9204;MQ=75.87;MQ0=0;MQRankSum=-3.792;QD=28.53;ReadPosRankSum=-6.532;VQSLOD=-0.6061;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:45:86.68:0,87,530	0/0:7,0:7:18.06:0,18,329	0/0:18,0:18:37.65:0,38,519	0/0:14,0:14:20.18:0,20,418	0/0:22,0:22:65.93:0,66,1112	0/0:29,0:29:75.22:0,75,1356	0/0:22,0:22:66.19:0,66,1132	1/1:18,4:33:45.11:948,45,0	0/0:19,0:19:51.13:0,51,936	0/0:32,0:32:75.07:0,75,1358	0/0:14,0:14:39.11:0,39,683	0/0:27,0:27:6.07:0,6,1204	0/0:27,0:27:69.14:0,69,1217	0/0:22,0:22:66.23:0,66,1219	0/0:29,0:30:81.06:0,81,1454	0/0:4,0:23:23.98:0,24,308	0/0:30,0:31:87.05:0,87,1497	0/0:23,0:23:47.67:0,48,1019	1/1:7,9:23:51.15:1242,51,0	1/1:5,8:17:24.04:593,24,0	1/1:8,4:15:5.98:118,6,0	0/0:20,0:21:60.18:0,60,1053	0/0:17,0:17:39.01:0,39,723	0/0:33,0:33:90.20:0,90,1628	0/0:24,0:24:69.20:0,69,1249	0/0:28,0:28:69.12:0,69,1212	1/1:12,7:23:15.05:491,15,0	0/0:2,0:2:6.02:0,6,111
chr10	50120185	.	TG	T	3693.65	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=6.260;DP=566;FS=1.995;HRun=1;HaplotypeScore=73.2277;InbreedingCoeff=0.9906;MQ=87.38;MQ0=0;MQRankSum=-1.253;QD=38.88;ReadPosRankSum=-0.130;VQSLOD=4.0949;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:57.19:0,57,896	0/0:15,0:15:42.14:0,42,669	0/0:26,0:25:36.79:0,37,969	0/0:26,0:25:72.09:0,72,1022	0/0:19,0:19:57.19:0,57,894	0/0:15,0:15:42.14:0,42,671	0/0:18,0:18:51.17:0,51,815	1/1:0,25:25:72.23:986,72,0	0/0:23,0:23:69.22:0,69,1077	0/0:23,0:23:66.23:0,66,1054	0/0:11,0:11:33.11:0,33,525	0/0:29,0:29:84.26:0,84,1311	0/0:22,0:22:66.21:0,66,1025	0/0:17,0:17:42.14:0,42,667	0/0:22,0:22:66.20:0,66,1009	0/0:23,0:23:57.16:0,57,860	0/0:28,0:28:81.24:0,81,1246	0/0:33,0:33:99:0,99,1524	1/1:0,14:14:42.13:570,42,0	1/1:1,4:5:12.04:168,12,0	1/1:0,37:37:99:1384,99,0	0/0:10,0:10:30.10:0,30,479	0/0:12,0:12:33.11:0,33,526	0/0:30,0:30:90.31:0,90,1434	0/0:17,0:17:48.16:0,48,765	0/0:22,0:22:63.20:0,63,964	1/1:0,14:14:42.14:587,42,0	0/0:6,0:6:18.06:0,18,288
chr10	50120211	.	GCA	G	753.26	PASS	AB=0.902;AC=18;AF=0.346;AN=52;BaseQRankSum=5.931;DP=657;FS=0.539;HRun=0;HaplotypeScore=106.2617;InbreedingCoeff=-0.3708;MQ=61.45;MQ0=17;MQRankSum=2.130;QD=1.82;ReadPosRankSum=1.252;VQSLOD=1.9929;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:33:30.02:0,30,309	0/0:16,2:18:24.07:0,24,328	./.	./.	0/1:19,0:19:5.28:5,0,285	0/1:13,3:15:17.91:18,0,142	0/0:25,1:28:16.78:0,17,501	0/0:19,0:19:12.01:0,12,159	0/1:24,2:27:27.42:27,0,531	0/1:19,3:22:78.53:79,0,205	0/1:13,1:13:11.88:12,0,247	0/1:26,6:33:29.66:30,0,728	0/1:23,3:29:99:183,0,351	1/1:9,1:26:37.24:209,37,0	0/1:27,2:29:59.28:59,0,407	0/0:13,0:23:11.80:0,12,161	0/1:24,4:30:17.01:17,0,303	0/1:25,5:30:99:102,0,604	0/1:17,0:16:20.88:21,0,114	0/0:7,0:8:3.91:0,4,211	0/1:54,1:56:13.20:13,0,688	0/1:11,1:13:29.03:29,0,162	0/0:9,0:8:6.02:0,6,83	0/0:29,1:31:18.19:0,18,643	0/1:17,1:19:15.17:15,0,452	0/1:22,1:23:19.56:20,0,249	0/0:14,0:19:29.97:0,30,303	0/1:9,2:10:57.11:70,0,57
chr10	50122572	.	AAC	A	869.31	PASS	AB=0.896;AC=23;AF=0.460;AN=50;BaseQRankSum=4.826;DP=577;FS=0.000;HRun=0;HaplotypeScore=76.7001;InbreedingCoeff=0.0726;MQ=61.95;MQ0=8;MQRankSum=0.119;QD=2.37;ReadPosRankSum=2.623;VQSLOD=1.5663;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:32,5:38:36.21:342,36,0	./.	./.	0/0:38,0:19:0.47:0,0,1	0/0:16,0:16:12.04:0,12,169	0/0:16,0:16:12.01:0,12,136	0/0:29,0:29:21.05:0,21,288	0/1:15,0:19:0:0,0,0	0/0:10,0:18:20.99:0,21,195	0/1:21,3:24:50.56:82,0,51	0/1:11,0:12:2.12:2,0,92	0/1:19,1:22:49.31:49,0,290	./.	0/1:19,0:19:10.71:11,0,203	0/1:21,2:23:43.41:43,0,201	1/1:21,2:24:23.85:215,24,0	0/1:25,3:28:69.66:70,0,210	0/1:21,2:24:48.53:49,0,279	1/1:18,0:19:2.80:13,3,0	1/1:9,0:14:4.66:19,5,0	1/1:19,0:19:2.84:14,3,0	0/0:15,0:15:6.02:0,6,82	0/0:13,1:15:12.02:0,12,137	0/1:37,1:38:5.24:5,0,259	0/1:17,1:18:17.19:17,0,162	0/0:10,0:9:6.02:0,6,88	1/1:13,0:17:14.20:70,14,0	0/1:4,3:7:23.20:23,0,72
chr10	50125905	.	C	CGG	4445.30	PASS	AB=0.929;AC=11;AF=0.196;AN=56;BaseQRankSum=-13.029;DP=590;FS=13.167;HRun=5;HaplotypeScore=68.2409;InbreedingCoeff=0.8971;MQ=76.56;MQ0=0;MQRankSum=-1.696;QD=35.28;ReadPosRankSum=-1.614;VQSLOD=3.0987;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,111,1398	0/0:12,0:12:30.09:0,30,382	0/0:15,0:15:30.09:0,30,380	0/1:12,0:11:9.36:9,0,227	0/0:24,0:24:57.17:0,57,726	0/0:21,0:21:54.17:0,54,688	0/0:24,0:24:66.17:0,66,822	1/1:5,28:34:87.24:1384,87,0	0/0:15,0:15:39.12:0,39,497	0/0:18,0:18:51.16:0,51,650	0/0:16,0:16:48.15:0,48,611	0/0:22,0:22:60.17:0,60,748	0/0:11,0:11:24.08:0,24,306	0/0:18,0:18:42.12:0,42,522	0/0:27,0:27:75.24:0,75,956	0/0:31,0:31:93.30:0,93,1185	0/0:26,0:26:72.21:0,72,902	0/0:20,0:20:54.11:0,54,642	1/1:5,21:26:63.11:1073,63,0	1/1:1,15:16:39.13:669,39,0	1/1:3,14:17:33.11:577,33,0	0/0:18,0:18:51.15:0,51,636	0/0:28,0:28:78.19:0,78,959	0/0:19,0:19:51.16:0,51,650	0/0:16,0:16:45.14:0,45,573	0/0:28,0:28:75.24:0,75,956	1/1:4,16:20:42.14:734,42,0	0/0:17,0:17:36.11:0,36,459
chr10	50126053	.	ATG	A	1043.25	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=5.666;DP=603;FS=13.658;HRun=0;HaplotypeScore=82.8854;InbreedingCoeff=0.9836;MQ=74.42;MQ0=1;MQRankSum=-4.740;QD=14.10;ReadPosRankSum=-3.468;VQSLOD=1.7978;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,135,2586	0/0:19,0:19:53.81:0,54,1017	0/0:37,0:33:94.31:0,94,1675	0/0:27,0:28:77.52:0,78,1325	0/0:17,0:17:51.16:0,51,928	0/0:18,0:18:54.17:0,54,995	0/0:30,0:30:87.28:0,87,1691	1/1:18,3:16:33.76:453,34,0	0/0:19,0:19:57.20:0,57,1146	0/0:19,0:19:51.17:0,51,1011	0/0:23,0:23:66.23:0,66,1257	0/0:20,0:20:60.21:0,60,1149	0/0:20,0:20:54.19:0,54,1068	0/0:21,0:21:63.22:0,63,1238	0/0:25,0:25:75.24:0,75,1428	0/0:24,0:24:71.91:0,72,1358	0/0:25,0:25:72.25:0,72,1429	0/0:22,0:21:60.18:0,60,1167	1/1:6,2:7:17.11:150,17,0	1/1:9,1:10:12.04:164,12,0	1/1:14,2:16:24.01:288,24,0	0/0:11,0:11:33.11:0,33,659	0/0:19,0:19:56.86:0,57,1039	0/0:30,0:30:87.30:0,87,1688	0/0:23,0:23:69.24:0,69,1372	0/0:22,0:22:66.23:0,66,1326	1/1:15,4:18:12.78:159,13,0	0/0:12,0:12:36.09:0,36,656
chr10	50126414	.	GC	G	4478.68	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=11.696;DP=612;FS=4.049;HRun=1;HaplotypeScore=58.0644;InbreedingCoeff=0.9993;MQ=87.78;MQ0=0;MQRankSum=-1.422;QD=37.95;ReadPosRankSum=0.123;VQSLOD=5.1982;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:33:99:0,102,1598	0/0:11,0:11:33.11:0,33,518	0/0:24,0:24:65.41:0,65,1097	0/0:18,0:18:53.97:0,54,825	0/0:18,0:18:54.18:0,54,863	0/0:21,0:21:63.20:0,63,982	0/0:18,0:18:54.14:0,54,793	1/1:0,27:27:78.23:1041,78,0	0/0:28,0:28:78.23:0,78,1218	0/0:22,0:22:63.20:0,63,960	0/0:12,0:12:33.11:0,33,515	0/0:21,0:21:63.21:0,63,1006	0/0:20,0:20:60.17:0,60,911	0/0:28,0:28:84.27:0,84,1319	0/0:38,0:38:99:0,111,1746	0/0:33,0:33:86.82:0,87,1453	0/0:31,0:31:93.32:0,93,1481	0/0:19,0:19:57.10:0,57,855	1/1:0,15:15:45.15:629,45,0	1/1:0,16:16:42.14:587,42,0	1/1:0,31:31:75.25:1048,75,0	0/0:14,0:14:39.12:0,39,600	0/0:11,0:11:33.08:0,33,478	0/0:29,0:29:87.21:0,87,1354	0/0:20,0:20:54.18:0,54,860	0/0:16,0:16:45.14:0,45,699	1/1:0,29:29:84.28:1174,84,0	0/0:8,0:8:24.08:0,24,383
chr10	50126517	.	G	GAAA	2595.04	PASS	AB=0.611;AC=13;AF=0.232;AN=56;BaseQRankSum=2.094;DP=716;FS=1.931;HRun=13;HaplotypeScore=122.7506;InbreedingCoeff=0.8287;MQ=79.95;MQ0=2;MQRankSum=1.336;QD=13.24;ReadPosRankSum=-4.553;VQSLOD=0.8115;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:11,24:38:13.39:558,13,0	0/0:8,0:8:20.96:0,21,218	0/0:53,0:31:1.81:0,2,234	0/0:25,0:18:4.50:0,4,57	0/0:29,0:33:71.58:0,72,681	0/0:22,0:24:59.74:0,60,598	0/0:18,0:24:49.15:0,49,501	1/1:15,3:36:2.53:504,3,0	0/0:26,0:28:59.91:0,60,639	0/0:30,0:35:39.35:0,39,453	0/0:14,0:15:23.47:0,23,204	0/0:24,0:27:49.64:0,50,509	0/0:25,0:27:50.64:0,51,529	0/0:17,0:17:44.96:0,45,456	0/0:33,0:37:85.29:0,85,877	1/1:5,14:21:33.07:528,33,0	0/0:30,0:33:65.48:0,65,668	0/0:29,0:31:69.36:0,69,762	1/1:10,0:25:38.91:330,39,0	1/1:9,2:29:56.55:515,57,0	0/1:6,1:22:2.83:187,0,3	0/0:16,0:19:29.77:0,30,326	0/0:18,0:19:42.57:0,43,448	0/0:22,0:23:56.89:0,57,589	0/0:12,0:13:32.90:0,33,340	0/0:18,0:20:25.21:0,25,272	1/1:9,1:25:18.67:151,19,0	0/0:7,0:7:17.98:0,18,177
chr10	50128102	.	G	GTGT	6434.53	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=13.138;DP=664;FS=5.621;HRun=0;HaplotypeScore=104.9811;InbreedingCoeff=0.9951;MQ=85.81;MQ0=0;MQRankSum=-6.597;QD=54.53;ReadPosRankSum=-2.994;VQSLOD=5.8850;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,108,1783	0/0:6,0:6:15.05:0,15,250	0/0:20,0:21:27.57:0,28,727	0/0:24,0:24:66.22:0,66,1074	0/0:30,0:30:84.29:0,84,1386	0/0:26,0:26:78.25:0,78,1247	0/0:26,0:26:72.22:0,72,1172	1/1:10,17:29:72.20:1538,72,0	0/0:26,0:26:72.25:0,72,1199	0/0:22,0:22:66.23:0,66,1099	0/0:15,0:15:42.14:0,42,699	0/0:32,0:32:93.32:0,93,1537	0/0:31,0:31:90.31:0,90,1497	0/0:23,0:23:63.22:0,63,1049	0/0:19,0:19:51.17:0,51,850	0/0:33,0:33:93.30:0,93,1520	0/0:39,0:39:99:0,117,1862	0/0:24,0:24:72.23:0,72,1174	1/1:3,14:18:48.16:1001,48,0	1/1:1,11:13:33.11:747,33,0	1/1:6,34:40:99:2198,99,0	0/0:20,0:20:54.18:0,54,886	0/0:15,0:15:45.15:0,45,749	0/0:33,0:33:96.33:0,96,1590	0/0:8,0:8:21.07:0,21,350	0/0:23,0:23:60.20:0,60,977	1/1:2,16:18:42.14:951,42,0	0/0:12,0:12:36.12:0,36,600
chr10	50129239	.	AC	A	4941.70	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=12.682;DP=744;FS=25.641;HRun=1;HaplotypeScore=68.8879;InbreedingCoeff=0.9994;MQ=88.40;MQ0=0;MQRankSum=-2.595;QD=39.85;ReadPosRankSum=-1.891;VQSLOD=2.4594;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,138,2107	0/0:10,0:10:30.10:0,30,470	0/0:23,0:23:66.21:0,66,1017	0/0:29,1:30:66.66:0,67,1205	0/0:26,0:26:75.23:0,75,1172	0/0:22,0:22:63.21:0,63,993	0/0:21,0:21:63.21:0,63,1001	1/1:0,33:33:99:1367,99,0	0/0:29,0:29:87.28:0,87,1365	0/0:37,0:37:99:0,111,1740	0/0:15,0:15:45.15:0,45,714	0/0:36,0:36:99:0,108,1695	0/0:25,0:25:75.25:0,75,1178	0/0:30,0:30:90.29:0,90,1409	0/0:35,0:35:99:0,105,1669	0/0:28,0:28:84.29:0,84,1338	0/0:40,0:40:99:0,120,1917	0/0:36,0:36:99:0,102,1605	1/1:0,17:17:51.14:679,51,0	1/1:0,13:13:36.12:503,36,0	1/1:0,36:36:96.32:1343,96,0	0/0:21,0:21:63.21:0,63,982	0/0:16,0:16:48.11:0,48,713	0/0:36,0:34:99:0,105,1649	0/0:19,0:19:57.19:0,57,904	0/0:31,0:31:93.26:0,93,1435	1/1:0,25:25:75.25:1049,75,0	0/0:8,0:8:24.08:0,24,383
chr10	50129896	.	GA	G	3705.08	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=9.373;DP=614;FS=7.997;HRun=3;HaplotypeScore=64.6283;InbreedingCoeff=0.9998;MQ=89.06;MQ0=0;MQRankSum=-2.057;QD=31.40;ReadPosRankSum=0.517;VQSLOD=3.3545;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:37:99:0,111,1451	0/0:12,0:12:33.11:0,33,461	0/0:30,0:29:87.18:0,87,1089	0/0:24,0:23:65.87:0,66,751	0/0:25,0:25:69.20:0,69,915	0/0:25,0:25:69.19:0,69,912	0/0:21,0:21:63.16:0,63,800	1/1:1,20:21:60.16:707,60,0	0/0:21,0:21:63.20:0,63,866	0/0:20,0:20:57.19:0,57,790	0/0:19,0:19:51.16:0,51,688	0/0:29,0:29:84.25:0,84,1124	0/0:26,0:26:75.20:0,75,978	0/0:22,0:22:63.20:0,63,866	0/0:28,0:28:81.26:0,81,1118	0/0:26,0:26:78.25:0,78,1057	0/0:24,0:24:72.23:0,72,981	0/0:12,0:12:33.10:0,33,440	1/1:2,16:18:40.12:530,40,0	1/1:1,15:16:42.13:508,42,0	1/1:1,32:33:81.25:999,81,0	0/0:14,0:14:42.14:0,42,581	0/0:18,0:18:48.13:0,48,634	0/0:21,0:21:60.17:0,60,792	0/0:14,0:14:42.12:0,42,552	0/0:14,0:14:42.13:0,42,571	1/1:1,29:30:78.23:962,78,0	0/0:13,0:13:36.12:0,36,503
chr10	50130533	.	A	ATCT	12800.26	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=4.005;DP=808;FS=1.337;HRun=0;HaplotypeScore=116.6219;InbreedingCoeff=0.9999;MQ=83.34;MQ0=0;MQRankSum=-7.999;QD=55.17;ReadPosRankSum=0.346;VQSLOD=6.8718;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,42:49:99:2487,108,0	0/0:12,0:12:36.12:0,36,613	0/0:34,0:34:72.80:0,73,1484	0/0:16,0:16:48.10:0,48,724	0/0:35,0:35:99:0,102,1731	0/0:22,0:21:66.23:0,66,1126	0/0:38,0:38:99:0,111,1859	1/1:10,22:36:99:2078,102,0	0/0:29,0:29:84.29:0,84,1419	0/0:28,0:28:81.28:0,81,1381	0/0:15,0:15:45.15:0,45,767	0/0:38,0:38:99:0,111,1893	0/0:32,0:32:93.29:0,93,1525	0/0:32,0:32:93.30:0,93,1551	0/0:47,0:47:99:0,132,2248	1/1:5,35:40:96.33:2207,96,0	0/0:52,0:52:99:0,144,2456	0/0:18,0:18:54.18:0,54,911	1/1:5,16:21:57.20:1311,57,0	1/1:2,30:33:93.23:1945,93,0	1/1:3,17:20:45.15:1006,45,0	0/0:18,0:18:54.18:0,54,920	0/0:24,0:24:69.15:0,69,1114	0/0:23,0:23:66.23:0,66,1126	0/0:17,0:17:51.17:0,51,870	0/0:35,0:35:99:0,102,1664	1/1:4,29:33:78.27:1767,78,0	0/0:11,0:11:33.11:0,33,556
chr10	50134281	.	TAC	T	346.37	PASS	AB=0.978;AC=23;AF=0.500;AN=46;BaseQRankSum=2.873;DP=448;FS=2.167;HRun=0;HaplotypeScore=72.2894;InbreedingCoeff=0.3829;MQ=57.92;MQ0=7;MQRankSum=0.175;QD=1.61;ReadPosRankSum=-0.012;VQSLOD=1.3031;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:34:24.05:0,24,284	0/0:8,0:8:3.01:0,3,44	./.	./.	0/0:10,0:10:6.02:0,6,85	1/1:17,0:18:1.89:13,2,0	1/1:12,7:19:9.02:96,9,0	./.	1/1:11,0:13:5.68:28,6,0	0/0:15,0:14:3.89:0,4,30	0/0:4,0:3:3:0,3,25	1/1:10,0:11:4.08:17,4,0	./.	0/1:13,0:13:18.57:19,0,96	0/1:21,0:21:7.14:7,0,215	0/0:9,0:15:6:0,6,52	0/0:26,0:27:23.06:0,23,252	0/1:26,1:27:54.14:54,0,124	1/1:12,0:13:2.84:14,3,0	1/1:11,0:13:2.84:14,3,0	./.	1/1:13,0:14:2.84:14,3,0	1/1:6,1:7:3.01:32,3,0	1/1:20,10:30:12.03:128,12,0	0/0:12,0:12:5.38:0,5,52	0/0:18,0:18:16.24:0,16,179	1/1:11,3:14:5.97:64,6,0	0/0:6,0:6:11.98:0,12,130
chr10	50134774	.	AGAGGC	A	4989.57	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=12.075;DP=581;FS=3.876;HRun=0;HaplotypeScore=109.7355;InbreedingCoeff=0.9982;MQ=80.94;MQ0=0;MQRankSum=-6.476;QD=41.58;ReadPosRankSum=0.477;VQSLOD=4.6895;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,120,3638	0/0:7,0:7:21.07:0,21,637	0/0:15,0:15:39.13:0,39,1063	0/0:19,0:19:42.05:0,42,897	0/0:24,0:24:66.23:0,66,2001	0/0:28,0:28:81.28:0,81,2377	0/0:20,0:20:57.20:0,57,1716	1/1:7,19:26:54.13:996,54,0	0/0:25,0:25:69.24:0,69,2033	0/0:11,0:11:30.10:0,30,913	0/0:14,0:14:42.14:0,42,1236	0/0:22,0:22:54.19:0,54,1623	0/0:25,0:25:66.23:0,66,1963	0/0:26,0:26:69.24:0,69,2022	0/0:20,0:20:57.18:0,57,1582	0/0:28,0:28:81.26:0,81,2339	0/0:19,0:19:54.19:0,54,1583	0/0:27,0:27:75.26:0,75,2286	1/1:2,11:13:33:468,33,0	1/1:2,17:19:45.15:922,45,0	1/1:4,43:47:88.13:1742,88,0	0/0:16,0:16:45.15:0,45,1291	0/0:10,0:10:27.09:0,27,792	0/0:22,0:22:66.23:0,66,2007	0/0:19,0:19:39.13:0,39,1126	0/0:13,0:13:30.09:0,30,851	1/1:0,15:15:42.14:861,42,0	0/0:9,0:9:27.09:0,27,822
chr10	50135392	.	CAA	C	1855.65	PASS	AB=0.955;AC=12;AF=0.214;AN=56;BaseQRankSum=7.585;DP=507;FS=7.684;HRun=10;HaplotypeScore=66.8431;InbreedingCoeff=0.7546;MQ=75.08;MQ0=1;MQRankSum=-1.618;QD=15.73;ReadPosRankSum=-0.450;VQSLOD=1.4816;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:29:69.24:0,69,1095	0/0:5,0:5:15.05:0,15,238	0/1:24,0:20:1.59:2,0,221	0/1:9,1:9:8.78:9,0,177	0/0:22,0:23:63.17:0,63,950	0/0:12,0:12:33.11:0,33,524	0/0:17,0:18:48.16:0,48,740	1/1:6,20:26:60.12:660,60,0	0/0:19,0:19:51.17:0,51,787	0/0:12,0:12:33.11:0,33,521	0/0:16,0:16:42.13:0,42,646	0/0:16,0:16:48.14:0,48,719	0/0:15,0:18:45.15:0,45,694	0/0:12,1:14:5.68:0,6,487	0/0:19,0:19:51.17:0,51,809	0/0:25,0:25:72.25:0,72,1139	0/0:28,0:29:74.73:0,75,1122	0/0:25,0:26:77.74:0,78,1174	1/1:3,13:16:1.32:383,1,0	1/1:1,13:14:39.10:433,39,0	1/1:5,7:12:12.02:134,12,0	0/0:13,0:13:27.09:0,27,427	0/0:16,0:15:42.10:0,42,640	0/0:19,0:19:48.16:0,48,762	0/0:22,0:22:54.11:0,54,747	0/0:23,0:23:54.17:0,54,817	1/1:3,13:15:36.09:401,36,0	0/0:15,0:15:45.14:0,45,684
chr10	50136048	.	ACCATGGAAC	A	8625.35	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=15.349;DP=794;FS=21.879;HRun=0;HaplotypeScore=218.9504;InbreedingCoeff=0.9359;MQ=89.17;MQ0=0;MQRankSum=-14.266;QD=62.50;ReadPosRankSum=-1.800;VQSLOD=2.9265;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,105,4581	0/0:12,0:12:36.12:0,36,1713	0/0:30,0:30:87.76:0,88,3869	0/0:33,0:33:93.15:0,93,4001	0/0:22,0:21:57.20:0,57,2785	0/0:26,0:26:78.27:0,78,3718	0/0:20,0:20:60.21:0,60,2867	1/1:7,30:37:87.29:2558,87,0	0/0:37,0:37:99:0,108,4971	0/0:27,0:27:78.26:0,78,3397	0/1:8,0:8:0.83:1,0,956	0/0:49,0:49:99:0,144,6819	0/0:24,0:24:66.21:0,66,2998	0/0:28,0:28:81.28:0,81,3934	0/0:41,0:41:99:0,123,5735	0/0:32,0:32:96.33:0,96,4608	0/0:56,0:56:99:0,169,7487	0/0:24,0:24:72.25:0,72,3282	1/1:2,16:18:48.15:1420,48,0	1/1:0,26:26:72.19:1987,72,0	1/1:5,19:24:42.10:1134,42,0	0/0:21,0:21:63.20:0,63,2856	0/0:26,0:26:75.23:0,75,3358	0/0:39,0:39:99:0,114,5067	0/0:21,0:21:63.22:0,63,2965	0/0:39,0:39:99:0,114,5491	1/1:2,23:25:51.17:1525,51,0	0/0:11,0:11:33.11:0,33,1496
chr10	50141056	.	CT	C	14076.19	PASS	AC=52;AF=0.963;AN=54;BaseQRankSum=0.802;DP=387;FS=0.000;HRun=1;HaplotypeScore=300.5909;InbreedingCoeff=0.7440;MQ=34.33;MQ0=0;MQRankSum=-1.732;QD=36.56;ReadPosRankSum=1.253;VQSLOD=3.7149;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,15:15:39.07:485,39,0	1/1:0,12:12:36.08:477,36,0	./.	0/0:1,0:1:3.01:0,3,38	1/1:2,17:19:45.15:619,45,0	1/1:1,15:16:45.15:625,45,0	1/1:2,20:21:57.09:734,57,0	1/1:0,18:18:48.16:664,48,0	1/1:0,8:8:24.08:331,24,0	1/1:0,24:24:69.23:953,69,0	1/1:0,14:14:39.12:528,39,0	1/1:1,9:10:27.05:353,27,0	1/1:0,12:12:36.02:453,36,0	1/1:0,11:11:33.07:432,33,0	1/1:0,16:16:48.03:590,48,0	1/1:0,14:14:42.09:549,42,0	1/1:0,8:8:21.03:270,21,0	1/1:0,11:11:18.06:245,18,0	1/1:0,12:12:36.12:500,36,0	1/1:0,26:26:75.23:986,75,0	1/1:1,8:9:21.06:258,21,0	1/1:0,21:21:63.20:836,63,0	1/1:0,19:19:51.16:695,51,0	1/1:1,10:11:21.07:292,21,0	1/1:1,26:27:75.24:1007,75,0	1/1:0,13:13:39.13:530,39,0	1/1:0,13:13:39.04:498,39,0	1/1:0,4:4:12.04:167,12,0
chr10	50141078	.	AC	A	13375.70	PASS	AC=52;AF=0.963;AN=54;BaseQRankSum=1.612;DP=363;FS=0.000;HRun=1;HaplotypeScore=339.1421;InbreedingCoeff=0.6404;MQ=31.80;MQ0=0;MQRankSum=-1.732;QD=36.95;ReadPosRankSum=1.392;VQSLOD=3.3745;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,16:16:45.15:579,45,0	1/1:0,13:13:39.13:502,39,0	./.	0/0:1,0:1:2.98:0,3,21	1/1:0,20:20:48.16:622,48,0	1/1:0,17:17:51.17:661,51,0	1/1:0,14:13:36.12:466,36,0	1/1:0,12:12:36.12:467,36,0	1/1:0,6:6:18.06:233,18,0	1/1:0,20:20:60.19:777,60,0	1/1:0,17:17:48.16:617,48,0	1/1:0,11:11:33.11:424,33,0	1/1:1,16:17:51.17:661,51,0	1/1:0,11:11:33.11:428,33,0	1/1:0,18:18:54.18:700,54,0	1/1:0,14:14:42.14:544,42,0	1/1:0,11:11:30.10:389,30,0	1/1:0,6:6:18.06:233,18,0	1/1:0,6:6:18.06:234,18,0	1/1:0,27:27:81.26:1050,81,0	1/1:0,2:2:6.02:78,6,0	1/1:0,22:22:66.21:855,66,0	1/1:0,20:20:57.19:738,57,0	1/1:0,9:9:12.04:149,12,0	1/1:0,22:21:60.19:773,60,0	1/1:0,14:14:42.13:534,42,0	1/1:0,13:13:39.13:505,39,0	1/1:0,4:4:12.04:156,12,0
chr10	50141095	.	GT	G	14536.29	PASS	AC=50;AF=1.000;AN=50;DP=369;FS=0.000;HRun=1;HaplotypeScore=362.2115;InbreedingCoeff=-0.0063;MQ=31.73;MQ0=0;QD=39.50;VQSLOD=2.9915;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,19:18:54.18:751,54,0	1/1:0,15:15:42.14:585,42,0	./.	./.	1/1:0,22:22:51.17:709,51,0	1/1:0,18:18:54.18:753,54,0	1/1:0,10:9:27.09:376,27,0	1/1:0,12:12:36.12:502,36,0	1/1:0,6:6:18.06:251,18,0	1/1:0,21:21:63.21:879,63,0	1/1:0,20:20:54.18:752,54,0	1/1:0,12:12:33.11:458,33,0	1/1:0,18:18:54.18:753,54,0	1/1:0,14:14:39.13:541,39,0	1/1:0,19:19:54.18:752,54,0	1/1:0,13:13:39.13:544,39,0	1/1:0,8:8:24.08:335,24,0	1/1:0,4:4:12.04:168,12,0	1/1:0,3:3:9.03:126,9,0	1/1:0,25:25:69.23:960,69,0	./.	1/1:0,23:23:69.23:958,69,0	1/1:0,21:21:60.20:836,60,0	1/1:0,6:6:9.03:125,9,0	1/1:0,22:21:63.21:872,63,0	1/1:0,15:15:45.15:628,45,0	1/1:0,15:15:45.15:627,45,0	1/1:0,7:7:21.07:293,21,0
chr10	50141101	.	GT	G	14119.36	PASS	AC=50;AF=1.000;AN=50;DP=358;FS=0.000;HRun=1;HaplotypeScore=363.8027;InbreedingCoeff=-0.0047;MQ=28.88;MQ0=0;QD=39.44;VQSLOD=3.0860;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,17:17:51.17:704,51,0	1/1:0,14:14:42.14:580,42,0	./.	./.	1/1:0,19:19:45.15:626,45,0	1/1:0,21:21:63.21:862,63,0	1/1:0,10:9:27.09:376,27,0	1/1:0,12:12:36.12:501,36,0	1/1:0,6:6:18.06:251,18,0	1/1:0,21:21:63.21:875,63,0	1/1:0,20:20:51.17:709,51,0	1/1:1,11:12:33.11:446,33,0	1/1:0,19:19:57.19:785,57,0	1/1:0,12:12:36.12:491,36,0	1/1:0,19:19:57.19:784,57,0	1/1:0,12:12:36.12:502,36,0	1/1:0,7:7:21.07:293,21,0	1/1:0,4:4:12.04:165,12,0	1/1:0,5:5:15.05:209,15,0	1/1:1,20:21:60.20:836,60,0	./.	1/1:0,20:20:57.19:795,57,0	1/1:0,22:22:60.20:825,60,0	1/1:0,6:6:9.03:125,9,0	1/1:0,19:18:54.18:747,54,0	1/1:0,18:18:54.18:754,54,0	1/1:0,14:14:42.14:586,42,0	1/1:0,7:7:21.07:293,21,0
chr10	50141108	.	AC	A	13062.94	PASS	AC=50;AF=1.000;AN=50;DP=352;FS=0.000;HRun=1;HaplotypeScore=339.2979;InbreedingCoeff=-0.0054;MQ=28.88;MQ0=0;QD=37.22;VQSLOD=3.1213;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,17:16:44.94:518,45,0	1/1:0,14:14:42.14:585,42,0	./.	./.	1/1:0,19:19:50.96:601,51,0	1/1:0,21:21:63.12:834,63,0	1/1:0,8:7:21.03:271,21,0	1/1:0,10:10:30.10:418,30,0	1/1:0,6:6:18.06:251,18,0	1/1:0,20:20:60.16:812,60,0	1/1:0,19:19:53.90:618,54,0	1/1:0,11:11:33.08:439,33,0	1/1:0,20:20:60.13:795,60,0	1/1:0,12:12:36.08:480,36,0	1/1:0,19:19:57.11:752,57,0	1/1:0,12:12:35.85:472,36,0	1/1:0,7:7:21.07:293,21,0	1/1:0,4:4:9.03:126,9,0	1/1:0,7:7:21.07:293,21,0	1/1:0,21:21:62.89:722,63,0	./.	1/1:0,19:19:56.96:684,57,0	1/1:1,19:20:53.88:599,54,0	1/1:0,5:5:9.03:125,9,0	1/1:0,18:17:51.17:711,51,0	1/1:0,19:19:57.19:790,57,0	1/1:0,15:15:45.02:562,45,0	1/1:0,8:8:24.04:313,24,0
chr10	50141547	.	C	CCTGCTGCTG	2061.88	PASS	AB=1.000;AC=18;AF=0.450;AN=40;BaseQRankSum=1.735;DP=568;FS=0.000;HRun=0;HaplotypeScore=148.1711;InbreedingCoeff=0.5523;MQ=51.82;MQ0=24;MQRankSum=-6.489;QD=8.02;ReadPosRankSum=-2.749;VQSLOD=2.0384;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	./.	1/1:21,0:8:0.47:1,0,0	0/0:29,0:14:6.28:0,6,174	./.	1/1:13,0:12:0.47:1,0,0	0/0:23,0:44:11.21:0,11,23	1/1:8,0:5:2.04:6,2,0	1/1:20,1:32:11.91:433,12,0	0/1:18,0:16:0:0,0,0	./.	0/0:20,0:35:10.54:0,11,23	0/0:8,0:22:11.73:0,12,27	0/0:24,0:24:48.16:0,48,1315	1/1:21,8:33:15.05:676,15,0	1/1:31,0:31:42.09:884,42,0	0/1:34,0:35:0:0,0,1823	0/0:24,0:24:39.12:0,39,1012	0/1:12,0:9:0:0,0,0	./.	0/1:32,0:27:34.11:34,0,38	./.	./.	0/0:8,0:24:7.48:0,7,16	0/0:19,0:17:5.98:0,6,102	./.	1/1:1,0:21:11.80:158,12,0	0/0:6,0:6:6.02:0,6,126
chr10	50142552	.	AAC	A	395.12	PASS	AB=0.878;AC=12;AF=0.214;AN=56;BaseQRankSum=2.955;DP=712;FS=2.398;HRun=0;HaplotypeScore=109.8174;InbreedingCoeff=-0.2922;MQ=66.89;MQ0=2;MQRankSum=2.484;QD=1.26;ReadPosRankSum=2.358;VQSLOD=2.1281;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:25:8.67:0,9,94	0/0:1,0:4:9:0,9,79	0/0:31,0:18:3:0,3,29	0/0:30,0:21:3.01:0,3,43	0/0:13,0:13:12.04:0,12,171	0/0:17,0:25:27.02:0,27,288	0/1:26,3:31:62.29:62,0,218	0/0:23,0:23:28.13:0,28,248	0/0:18,0:26:23.67:0,24,246	0/0:25,0:25:20.93:0,21,296	0/1:11,4:16:15.47:15,0,190	0/1:36,4:40:6.88:7,0,682	0/1:25,2:27:33.94:34,0,321	0/1:22,7:29:99:151,0,232	0/0:20,1:37:23.52:0,24,511	0/0:22,0:38:35.47:0,35,291	0/1:19,1:21:50.69:51,0,227	0/1:18,8:27:99:106,0,367	0/0:12,0:12:13.25:0,13,143	0/0:18,0:21:2.54:0,3,25	0/0:39,0:46:26.85:0,27,233	0/1:17,2:19:0.42:0,0,398	0/0:18,0:18:33.08:0,33,438	0/1:44,6:50:34.41:34,0,722	0/1:22,3:25:33.92:34,0,377	0/1:20,0:20:13.80:14,0,211	0/0:22,0:22:18.42:0,18,172	0/1:6,1:6:27.49:27,0,39
chr10	50142917	.	A	ATC	7349.76	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=9.812;DP=870;FS=2.426;HRun=0;HaplotypeScore=108.0986;InbreedingCoeff=1.0000;MQ=84.18;MQ0=0;MQRankSum=-3.174;QD=45.94;ReadPosRankSum=-2.134;VQSLOD=5.1008;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,132,1968	0/0:19,0:19:54.16:0,54,782	0/0:23,0:23:60.02:0,60,847	0/0:29,0:29:78.09:0,78,1083	0/0:23,0:23:69.18:0,69,988	0/0:21,0:21:63.18:0,63,918	0/0:38,0:38:99:0,111,1631	1/1:2,31:33:90.25:1533,90,0	0/0:35,0:35:99:0,102,1451	0/0:27,0:27:78.20:0,78,1146	0/0:18,0:18:54.17:0,54,803	0/0:36,0:36:99:0,105,1564	0/0:31,0:31:93.02:0,93,1346	0/0:44,0:44:99:0,119,1832	0/0:36,0:35:99:0,102,1512	0/0:39,0:38:99:0,111,1609	0/0:42,0:42:99:0,120,1724	0/0:23,0:23:69.06:0,69,891	1/1:0,36:36:99:1902,108,0	1/1:1,24:24:60.21:1150,60,0	1/1:1,39:40:72.47:1492,72,0	0/0:26,0:26:72.21:0,72,1054	0/0:24,0:24:66.19:0,66,965	0/0:38,0:38:99:0,111,1603	0/0:28,0:27:81.23:0,81,1175	0/0:38,0:38:99:0,111,1678	1/1:1,25:26:66.23:1272,66,0	0/0:25,0:25:75.25:0,75,1140
chr10	50143597	.	A	ACGCGCG	1137.60	PASS	AB=0.652;AC=11;AF=0.196;AN=56;BaseQRankSum=1.199;DP=536;FS=3.481;HRun=0;HaplotypeScore=110.6811;InbreedingCoeff=0.7326;MQ=70.31;MQ0=14;MQRankSum=-4.348;QD=7.96;ReadPosRankSum=-4.700;VQSLOD=0.5893;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:2,0:31:2.67:11,3,0	0/0:8,0:7:18.06:0,18,376	0/0:27,0:16:41.93:0,42,848	0/0:34,0:18:42.11:0,42,892	0/0:17,0:16:36.12:0,36,779	0/0:21,0:21:53.76:0,54,1081	0/0:23,0:23:53.86:0,54,1198	1/1:15,0:15:33.88:530,34,0	0/0:18,0:18:48.16:0,48,966	0/0:9,0:9:18.06:0,18,413	0/0:11,0:11:27.09:0,27,603	0/0:20,0:19:33.11:0,33,748	0/0:23,0:23:53.97:0,54,1187	0/0:17,0:17:42.14:0,42,905	0/0:27,0:27:72.19:0,72,1428	0/1:22,0:29:77.83:78,0,213	0/0:23,0:22:54.17:0,54,1154	0/0:22,0:21:60.17:0,60,1282	1/1:4,5:13:30.03:544,30,0	0/1:4,5:12:0:0,0,0	0/1:6,20:33:0:0,0,0	0/0:15,0:15:33.11:0,33,764	0/0:16,0:16:39.13:0,39,870	0/0:23,0:23:48.16:0,48,1092	0/0:17,0:17:38.99:0,39,782	0/0:17,0:17:48.11:0,48,1055	1/1:10,0:10:6.02:120,6,0	0/0:5,0:5:15.05:0,15,316
chr10	50143599	.	GCA	G	330.89	PASS	AB=0.885;AC=17;AF=0.327;AN=52;BaseQRankSum=4.387;DP=552;FS=18.185;HRun=0;HaplotypeScore=70.7498;InbreedingCoeff=-0.2703;MQ=66.18;MQ0=14;MQRankSum=1.768;QD=1.09;ReadPosRankSum=1.657;VQSLOD=0.2360;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:5.99:0,6,49	1/1:5,2:6:6.01:65,6,0	./.	./.	0/1:16,5:20:68.03:68,0,117	0/1:19,0:22:27.97:28,0,102	0/1:23,0:24:9.62:10,0,259	0/0:14,0:14:2.97:0,3,20	0/1:13,3:18:80.36:80,0,127	0/0:13,0:13:14.67:0,15,105	0/1:11,1:12:24.07:26,0,24	0/1:17,5:21:8.48:8,0,235	0/1:23,2:25:8.52:9,0,260	0/1:16,3:19:17.50:18,0,118	0/1:24,3:27:58.44:58,0,348	0/0:28,0:28:23.79:0,24,203	0/0:22,1:23:15.74:0,16,267	0/1:18,5:22:58.39:58,0,404	0/0:10,0:11:12.77:0,13,96	0/0:15,0:15:0.66:0,1,21	1/1:27,0:27:0.47:1,0,0	0/0:15,0:15:21.01:0,21,266	0/1:13,3:16:20.47:20,0,122	0/1:21,1:22:5.47:5,0,292	0/1:18,1:19:18.01:18,0,123	0/0:16,0:17:6.85:0,7,204	0/0:6,0:17:12.19:0,12,70	0/0:5,0:5:6.01:0,6,73
chr10	50143643	.	A	ACC	692.98	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.725;DP=625;FS=5.719;HRun=3;HaplotypeScore=94.2354;InbreedingCoeff=0.9259;MQ=73.74;MQ0=12;MQRankSum=-3.162;QD=11.55;ReadPosRankSum=-0.571;VQSLOD=0.2154;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:27,1:28:49.61:435,50,0	0/0:8,0:7:14.91:0,15,115	0/0:31,0:20:53.31:0,53,534	0/0:37,0:26:64.66:0,65,610	0/0:28,0:28:62.83:0,63,507	0/0:18,0:18:4.73:0,5,281	0/0:28,0:28:74.82:0,75,663	0/0:16,0:16:44.96:0,45,396	0/0:14,0:14:35.98:0,36,327	0/0:22,0:22:56.88:0,57,490	0/0:17,0:17:39.86:0,40,335	0/0:27,0:26:59.36:0,59,533	0/0:23,0:23:53.67:0,54,531	0/0:21,0:21:46.04:0,46,402	0/0:29,0:29:70.55:0,71,734	1/1:6,23:32:26.87:379,27,0	0/0:20,0:19:53.88:0,54,494	0/0:26,0:25:63.06:0,63,694	0/0:16,0:16:22.44:0,22,269	0/0:21,0:21:32.28:0,32,263	0/0:34,0:34:48.29:0,48,377	0/0:24,0:24:56.93:0,57,571	0/0:18,0:18:47.93:0,48,436	0/0:19,0:19:43.14:0,43,465	0/0:16,0:16:38.98:0,39,371	0/0:23,0:23:56.87:0,57,523	0/0:16,0:16:31.87:0,32,244	0/0:13,0:13:29.94:0,30,257
chr10	50144438	.	A	AT	73.48	PASS	AB=0.583;AC=1;AF=0.018;AN=56;BaseQRankSum=-3.645;DP=586;FS=5.334;HRun=9;HaplotypeScore=56.0277;InbreedingCoeff=0.1775;MQ=71.19;MQ0=0;MQRankSum=0.111;QD=10.50;ReadPosRankSum=1.235;VQSLOD=2.2991;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,135,1172	0/1:2,5:7:7.94:148,0,8	0/0:14,0:13:5.18:0,5,166	0/0:10,0:10:20.97:0,21,180	0/0:21,1:22:26.80:0,27,461	0/0:16,0:16:41.97:0,42,365	0/0:20,0:20:53.93:0,54,461	0/0:31,0:31:59.93:0,60,518	0/0:16,0:16:41.96:0,42,361	0/0:24,0:24:59.97:0,60,517	0/0:15,0:15:44.99:0,45,391	0/0:29,0:29:80.98:0,81,703	0/0:21,0:21:59.98:0,60,521	0/0:26,0:26:56.93:0,57,489	0/0:22,0:22:59.96:0,60,517	0/0:21,0:21:44.94:0,45,386	0/0:25,0:25:71:0,71,601	0/0:30,0:30:74.93:0,75,644	0/0:27,0:27:65.95:0,66,568	0/0:18,1:19:20.81:0,21,409	0/0:14,0:14:38.99:0,39,338	0/0:19,0:19:50.98:0,51,443	0/0:9,0:9:20.99:0,21,182	0/0:26,0:26:68.98:0,69,599	0/0:24,0:24:59.95:0,60,521	0/0:19,0:19:56.99:0,57,495	0/0:19,0:19:47.96:0,48,412	0/0:12,0:12:35.97:0,36,308
chr10	50145086	.	AT	A	4071.84	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=12.131;DP=644;FS=6.431;HRun=10;HaplotypeScore=67.0234;InbreedingCoeff=0.9760;MQ=74.62;MQ0=0;MQRankSum=-0.979;QD=21.21;ReadPosRankSum=1.421;VQSLOD=4.7487;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,22:24:32.81:514,33,0	0/0:8,0:8:24.06:0,24,265	0/0:20,0:19:47.99:0,48,479	0/0:5,0:6:8.94:0,9,65	0/0:17,0:17:48.09:0,48,511	0/0:33,0:33:87.17:0,87,915	0/0:21,0:21:45.11:0,45,491	1/1:5,27:32:80.96:700,81,0	0/0:21,0:22:56.97:0,57,603	0/0:32,0:32:68.46:0,68,736	0/0:23,1:24:40.17:0,40,662	0/0:35,1:36:70.08:0,70,950	0/0:32,0:32:87.23:0,87,955	0/0:25,2:27:46.11:0,46,720	0/0:31,1:32:61.08:0,61,872	1/1:3,40:43:95.83:833,96,0	0/0:19,0:19:54.10:0,54,571	0/0:16,0:16:44.97:0,45,446	1/1:4,17:21:50.98:443,51,0	1/1:1,27:28:74.94:645,75,0	1/1:0,17:17:44.99:391,45,0	0/0:15,0:15:42.11:0,42,465	0/0:15,0:15:42.11:0,42,465	0/0:14,1:15:13.04:0,13,363	0/0:27,1:28:41.93:0,42,663	0/0:21,0:21:55.36:0,55,577	1/1:4,23:27:62.96:547,63,0	0/0:12,1:13:10.04:0,10,339
chr10	50145737	.	AT	A	2795.49	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=11.309;DP=546;FS=3.931;HRun=12;HaplotypeScore=61.8305;InbreedingCoeff=0.9683;MQ=74.14;MQ0=2;MQRankSum=0.696;QD=17.36;ReadPosRankSum=0.348;VQSLOD=4.8624;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,23:27:62.74:487,63,0	0/0:12,0:12:33.05:0,33,328	0/0:15,0:14:20.49:0,20,177	0/0:14,0:11:15.77:0,16,160	0/0:27,1:28:49.78:0,50,672	0/0:21,0:22:59.92:0,60,582	0/0:18,0:18:45.06:0,45,439	1/1:8,31:39:92.54:710,93,0	0/0:18,0:19:47.93:0,48,471	0/0:15,0:18:47.74:0,48,447	0/0:27,0:27:69.13:0,69,694	0/0:19,0:19:36.06:0,36,360	0/0:11,2:13:9.76:0,10,257	0/0:16,0:16:48.07:0,48,474	0/0:21,0:22:59.93:0,60,580	1/1:2,24:26:56.78:441,57,0	0/0:20,0:20:30.91:0,31,455	0/0:22,0:25:42.37:0,42,542	1/1:1,8:9:23.87:179,24,0	1/1:1,15:16:44.76:340,45,0	1/1:0,12:12:29.89:232,30,0	0/0:18,0:18:45.09:0,45,455	0/0:14,0:14:35.93:0,36,328	0/0:18,0:18:51.08:0,51,508	0/0:23,0:23:51.09:0,51,512	0/0:19,0:20:41.23:0,41,444	1/1:1,31:32:77.70:603,78,0	0/0:3,0:3:6:0,6,54
chr10	50145919	.	CA	C	3848.70	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=12.529;DP=599;FS=6.897;HRun=9;HaplotypeScore=60.0747;InbreedingCoeff=0.9623;MQ=67.64;MQ0=0;MQRankSum=1.000;QD=22.91;ReadPosRankSum=0.270;VQSLOD=4.4077;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:9,16:25:33.32:511,33,0	0/0:6,0:6:18.04:0,18,199	0/0:14,1:14:2.57:0,3,248	0/0:17,0:15:18.16:0,18,273	0/0:28,0:28:72.21:0,72,831	0/0:30,1:31:59.72:0,60,916	0/0:14,0:14:23.99:0,24,432	1/1:9,29:38:87.01:791,87,0	0/0:14,0:14:39.12:0,39,450	0/0:32,0:32:93.28:0,93,1073	0/0:25,0:25:66.17:0,66,743	0/0:19,0:19:54.16:0,54,623	0/0:12,0:12:30.07:0,30,335	0/0:18,0:18:48.14:0,48,554	0/0:33,1:34:71.83:0,72,1080	1/1:2,24:26:72.04:659,72,0	0/0:18,0:18:48.11:0,48,540	0/0:17,0:17:45.10:0,45,505	1/1:1,16:17:48:433,48,0	1/1:2,27:29:78.03:714,78,0	1/1:2,12:14:36.02:330,36,0	0/0:23,0:23:60.18:0,60,692	0/0:24,0:24:69.20:0,69,795	0/0:23,0:22:63.19:0,63,725	0/0:21,1:22:26.69:0,27,554	0/0:18,1:19:20.65:0,21,471	1/1:1,18:19:45.02:412,45,0	0/0:20,0:20:60.18:0,60,692
chr10	50146025	.	A	AC	8090.92	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-3.763;DP=613;FS=0.000;HRun=0;HaplotypeScore=61.1110;InbreedingCoeff=0.9825;MQ=78.61;MQ0=0;MQRankSum=0.701;QD=42.36;ReadPosRankSum=0.633;VQSLOD=5.2483;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,27:27:75.26:1197,75,0	0/0:7,0:7:21.07:0,21,293	0/0:13,0:13:33.09:0,33,442	0/0:14,0:14:6.69:0,7,357	0/0:41,0:41:99:0,123,1686	0/0:28,0:28:84.23:0,84,1121	0/0:12,0:12:36.09:0,36,467	1/1:1,39:39:99:1786,117,0	0/0:20,0:20:57.17:0,57,778	0/0:25,0:25:72.22:0,72,962	0/0:17,0:17:48.14:0,48,652	0/0:21,0:21:63.19:0,63,847	0/0:22,0:22:66.20:0,66,889	0/0:24,0:24:72.22:0,72,974	0/0:34,0:34:99:0,102,1367	1/1:2,34:36:96.33:1534,96,0	0/0:18,0:18:54.18:0,54,753	0/0:16,0:16:48.16:0,48,671	1/1:1,20:21:46.16:937,46,0	1/1:0,26:26:66:959,66,0	1/1:0,14:14:36.12:575,36,0	0/0:18,0:18:51.13:0,51,661	0/0:17,0:17:51.12:0,51,645	0/0:16,0:16:48.12:0,48,648	0/0:26,0:26:78.23:0,78,1056	0/0:18,0:18:54.18:0,54,754	1/1:0,27:27:69.24:1102,69,0	0/0:15,0:15:45.15:0,45,629
chr10	50147499	.	GC	G	678.09	PASS	AC=4;AF=0.077;AN=52;BaseQRankSum=1.135;DP=320;FS=2.127;HRun=6;HaplotypeScore=56.3065;InbreedingCoeff=0.8655;MQ=71.66;MQ0=1;MQRankSum=-1.677;QD=21.87;ReadPosRankSum=1.909;VQSLOD=2.9838;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,10:11:21.05:226,21,0	./.	0/0:15,0:14:31.86:0,32,342	0/0:10,0:7:11.94:0,12,118	0/0:7,0:7:15.05:0,15,197	0/0:9,0:9:24.08:0,24,315	0/0:16,0:16:45.15:0,45,589	0/0:25,0:25:58.68:0,59,708	0/0:8,0:8:21.04:0,21,236	0/0:11,0:11:27.09:0,27,355	0/0:5,0:5:12.04:0,12,158	0/0:10,0:10:27.06:0,27,316	0/0:12,0:12:34.64:0,35,407	0/0:11,0:11:30.10:0,30,392	0/0:21,0:21:57.15:0,57,697	1/1:3,17:20:54.12:571,54,0	0/0:4,0:4:9.03:0,9,118	0/0:5,0:5:12.04:0,12,158	0/0:7,0:7:15.05:0,15,197	0/0:17,0:17:39.13:0,39,510	0/0:36,0:36:90.19:0,90,1122	0/0:7,0:7:12.04:0,12,152	0/0:6,0:6:15.05:0,15,195	0/0:13,0:13:24.05:0,24,274	0/0:8,0:8:12.04:0,12,156	0/0:5,0:5:15.05:0,15,197	0/0:18,0:18:48.16:0,48,627	./.
chr10	50147535	.	TCA	T	383.06	PASS	AB=0.914;AC=14;AF=0.269;AN=52;BaseQRankSum=7.903;DP=259;FS=0.000;HRun=0;HaplotypeScore=61.0407;InbreedingCoeff=-0.3463;MQ=72.01;MQ0=1;MQRankSum=-0.236;QD=2.24;ReadPosRankSum=7.903;VQSLOD=0.1917;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:14.95:0,15,115	./.	0/0:23,0:9:13.34:0,13,147	0/0:16,0:7:5.10:0,5,93	0/0:5,0:5:5.82:0,6,48	0/1:6,1:6:37.17:37,0,45	0/1:14,1:15:19.53:20,0,91	0/1:23,0:23:61.54:62,0,168	0/1:2,1:3:4.77:21,0,5	0/0:5,0:5:11.99:0,12,115	0/0:4,0:4:5.89:0,6,37	0/1:6,2:8:50.56:51,0,51	0/1:8,0:8:2.50:3,0,79	0/0:11,0:11:23.89:0,24,218	0/1:10,4:14:59.40:59,0,102	0/1:8,1:9:50.43:50,0,63	0/0:2,0:2:3.01:0,3,38	0/0:2,0:2:5.97:0,6,46	0/1:11,0:11:3.18:3,0,51	0/1:15,0:15:17.42:41,0,17	0/1:27,0:27:30.22:54,0,30	0/0:4,0:4:6.61:0,7,37	0/1:6,0:6:2.02:2,0,19	0/1:4,2:6:15.59:49,0,16	0/0:3,0:3:8.97:0,9,71	0/0:3,0:3:8.96:0,9,72	0/1:19,0:19:30.52:69,0,31	./.
chr10	50147537	.	ACC	A	2752.94	PASS	AB=0.917;AC=32;AF=0.615;AN=52;BaseQRankSum=-0.448;DP=252;FS=18.420;HRun=13;HaplotypeScore=52.5665;InbreedingCoeff=0.5253;MQ=72.33;MQ0=1;MQRankSum=-2.913;QD=14.19;ReadPosRankSum=4.213;VQSLOD=0.6504;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:9:0:0,0,0	./.	0/0:22,0:9:0.12:0,0,72	0/1:15,0:7:16.97:17,0,60	0/1:4,0:5:0:0,0,0	1/1:3,4:7:11.97:116,12,0	1/1:7,5:15:23.45:198,23,0	1/1:9,14:23:39.83:405,40,0	1/1:1,0:3:5.75:41,6,0	0/0:5,0:5:3:0,3,26	0/0:2,0:4:5.98:0,6,52	1/1:5,2:8:14.73:127,15,0	1/1:5,2:8:8.69:70,9,0	0/0:7,0:7:7.25:0,7,64	1/1:11,2:14:14.67:128,15,0	1/1:7,1:9:14.72:126,15,0	0/0:1,0:1:2.99:0,3,23	0/0:3,0:3:0:0,0,0	1/1:4,6:10:17.71:174,18,0	1/1:3,12:15:29.98:291,30,0	1/1:2,24:26:59.72:580,60,0	1/1:0,1:3:5.49:24,5,0	1/1:3,2:7:5.97:58,6,0	1/1:3,1:6:11.75:99,12,0	0/0:3,0:3:0:0,0,0	0/0:3,0:3:0:0,0,0	1/1:3,16:19:44.91:436,45,0	./.
chr10	50148574	.	C	CTTA	7510.88	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-12.106;DP=559;FS=11.101;HRun=0;HaplotypeScore=72.9471;InbreedingCoeff=0.9967;MQ=88.96;MQ0=0;MQRankSum=-4.292;QD=63.12;ReadPosRankSum=-0.906;VQSLOD=5.8070;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:40:99:0,120,2162	0/0:8,0:8:24.08:0,24,447	0/0:21,0:21:60.18:0,60,1071	0/0:22,0:22:60:0,60,1040	0/0:15,0:15:42.12:0,42,749	0/0:22,0:22:63.22:0,63,1174	0/0:16,0:16:48.16:0,48,885	1/1:6,25:34:99:2384,102,0	0/0:19,0:19:57.16:0,57,1007	0/0:20,0:20:60.21:0,60,1115	0/0:11,0:11:33.11:0,33,614	0/0:22,0:22:66.19:0,66,1166	0/0:17,0:17:51.17:0,51,951	0/0:23,0:23:66.21:0,66,1194	0/0:18,0:18:54.19:0,54,1000	0/0:20,0:20:60.21:0,60,1119	0/0:37,0:37:99:0,111,2018	0/0:35,0:35:99:0,102,1785	1/1:2,8:10:27.09:650,27,0	1/1:2,10:13:33.08:741,33,0	1/1:0,44:47:99:2849,120,0	0/0:12,0:12:36.12:0,36,671	0/0:7,0:7:18.06:0,18,335	0/0:11,0:11:33.07:0,33,579	0/0:17,0:17:51.17:0,51,951	0/0:18,0:18:54.19:0,54,1002	1/1:0,15:15:36.12:886,36,0	0/0:8,0:8:24.08:0,24,447
chr10	50149521	.	A	ATTTT	3088.37	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=12.720;DP=521;FS=0.000;HRun=8;HaplotypeScore=118.2056;InbreedingCoeff=0.9440;MQ=63.44;MQ0=0;MQRankSum=-6.570;QD=19.92;ReadPosRankSum=-4.330;VQSLOD=-0.2779;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:25,3:28:37.10:559,37,0	0/0:5,0:5:12.03:0,12,180	0/0:15,0:9:4.74:0,5,28	0/0:8,0:5:5.84:0,6,59	0/0:16,0:16:36.08:0,36,533	0/0:21,0:21:60.20:0,60,895	0/0:17,0:17:42.12:0,42,633	1/1:35,0:35:55.95:429,56,0	0/0:17,0:17:45.13:0,45,661	0/0:13,0:13:36.12:0,36,537	0/0:5,0:5:12.03:0,12,181	0/0:25,0:25:72.24:0,72,1061	0/0:13,0:14:36.08:0,36,523	0/0:30,0:30:78.20:0,78,1139	0/0:19,0:19:39.10:0,39,589	1/1:19,6:29:56.85:1094,57,0	0/0:34,0:34:93.27:0,93,1383	0/0:30,0:30:81.21:0,81,1190	1/1:15,0:16:34.75:348,35,0	1/1:12,0:12:28.95:235,29,0	1/1:13,0:14:17.93:208,18,0	0/0:10,0:10:24.07:0,24,350	0/0:13,0:13:27.04:0,27,392	0/0:22,0:22:57.15:0,57,850	0/0:16,0:16:48.14:0,48,702	0/0:26,0:26:63.17:0,63,934	1/1:21,0:21:53.37:411,53,0	0/0:10,0:10:24.08:0,24,363
chr10	50149529	.	TAAAAA	T	968.04	PASS	AB=0.889;AC=5;AF=0.089;AN=56;BaseQRankSum=6.279;DP=494;FS=1.633;HRun=11;HaplotypeScore=118.8147;InbreedingCoeff=0.7721;MQ=64.37;MQ0=0;MQRankSum=-7.512;QD=24.20;ReadPosRankSum=0.174;VQSLOD=1.7013;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,9:13:24.02:375,24,0	0/0:6,0:6:18.06:0,18,522	0/0:17,0:9:17.95:0,18,271	0/1:6,0:5:25.29:25,0,50	0/0:13,0:14:33.11:0,33,923	0/0:21,0:22:57.20:0,57,1602	0/0:15,0:15:42.14:0,42,1191	0/0:22,0:27:60.20:0,60,537	0/0:17,0:17:45.15:0,45,1235	0/0:19,0:18:54.19:0,54,1570	0/0:7,0:7:21.07:0,21,542	0/0:25,0:29:81.26:0,81,2233	0/0:15,0:15:42.14:0,42,1248	0/0:26,0:26:75.25:0,75,2155	0/0:16,0:16:45.15:0,45,1242	1/1:13,6:19:51.14:697,51,0	0/0:35,0:35:99:0,99,2926	0/0:29,0:30:75.24:0,75,2110	0/0:15,0:15:33.59:0,34,250	0/0:14,0:14:37.24:0,37,227	0/0:13,0:13:31.68:0,32,260	0/0:10,0:11:33.10:0,33,826	0/0:11,0:12:33.10:0,33,839	0/0:19,0:20:54.19:0,54,1584	0/0:20,0:20:51.18:0,51,1503	0/0:25,0:25:67.47:0,67,1804	0/0:19,0:20:54.98:0,55,428	0/0:9,0:9:27.09:0,27,797
chr10	50153629	.	C	CT	1376.16	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=6.833;DP=623;FS=4.298;HRun=8;HaplotypeScore=78.7006;InbreedingCoeff=0.8441;MQ=72.64;MQ0=0;MQRankSum=-2.315;QD=20.85;ReadPosRankSum=1.556;VQSLOD=3.9548;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,31:34:81.33:891,81,0	0/0:13,0:13:33.02:0,33,302	0/0:15,0:15:26.97:0,27,246	0/1:12,0:12:2.05:2,0,118	0/0:20,0:20:50.99:0,51,458	0/0:31,0:32:89.05:0,89,797	0/0:17,0:17:41.99:0,42,379	0/0:36,0:36:47.56:0,48,426	0/0:25,0:25:63:0,63,572	0/0:25,0:25:66.02:0,66,601	0/0:31,0:31:80.25:0,80,720	0/0:22,0:22:48:0,48,439	0/0:26,0:26:69.03:0,69,631	0/0:20,1:21:13.38:0,13,373	0/0:30,0:30:87.05:0,87,796	1/1:3,17:20:54.15:606,54,0	0/0:29,0:29:66.02:0,66,604	0/0:18,0:18:45.01:0,45,412	0/0:18,0:18:46.92:0,47,327	0/0:26,0:26:52.57:0,53,248	0/0:11,0:11:27.98:0,28,132	0/0:23,0:23:66.04:0,66,604	0/0:13,0:13:33.02:0,33,302	0/0:13,0:13:36.02:0,36,329	0/0:24,0:24:60.02:0,60,549	0/0:31,0:31:78.02:0,78,713	0/0:29,0:29:62.89:0,63,307	0/0:9,0:9:27.01:0,27,247
chr10	50153638	.	C	CT	5149.60	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=-3.450;DP=612;FS=8.504;HRun=8;HaplotypeScore=67.9821;InbreedingCoeff=0.9113;MQ=72.02;MQ0=0;MQRankSum=0.412;QD=27.84;ReadPosRankSum=0.022;VQSLOD=5.1308;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,29:33:82.14:1004,82,0	0/0:12,0:12:27.05:0,27,275	0/1:15,0:15:14.13:14,0,158	0/0:13,0:13:22.84:0,23,232	0/0:21,0:21:57.12:0,57,577	0/0:32,0:32:87.19:0,87,886	0/0:15,0:15:39.05:0,39,398	1/1:5,29:34:81.26:1018,81,0	0/0:26,0:26:72.14:0,72,723	0/0:28,0:28:66.14:0,66,673	0/0:29,0:29:84.18:0,84,850	0/0:20,0:20:60.12:0,60,604	0/0:23,0:23:63.12:0,63,635	0/0:21,0:21:60:0,60,594	0/0:31,0:31:87.19:0,87,887	1/1:0,22:22:54.17:664,54,0	0/0:24,0:24:66.15:0,66,673	0/0:17,0:17:51.11:0,51,519	1/1:5,13:18:39.12:490,39,0	1/1:0,21:21:63.20:790,63,0	1/1:0,11:11:30.10:377,30,0	0/0:23,0:23:60.12:0,60,605	0/0:13,0:13:30.05:0,30,299	0/0:14,0:14:36.03:0,36,356	0/0:23,0:23:60.13:0,60,612	0/0:30,0:30:78.18:0,78,795	1/1:2,29:31:62.99:793,63,0	0/0:12,0:12:36.08:0,36,367
chr10	50155544	.	A	ACC	1324.23	PASS	AB=0.574;AC=13;AF=0.232;AN=56;BaseQRankSum=3.155;DP=636;FS=2.236;HRun=9;HaplotypeScore=88.4608;InbreedingCoeff=0.7960;MQ=74.80;MQ0=1;MQRankSum=-2.540;QD=7.65;ReadPosRankSum=-2.798;VQSLOD=-0.1813;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:8,0:31:10.29:85,0,10	0/0:10,0:10:24.05:0,24,255	0/0:22,0:21:39.02:0,39,370	0/0:24,0:24:46.32:0,46,425	0/0:18,0:18:51.13:0,51,540	0/0:16,0:16:44.84:0,45,459	0/0:26,0:26:66.10:0,66,693	1/1:15,10:25:27.45:321,27,0	0/0:24,0:24:63.12:0,63,670	0/0:21,0:21:54.06:0,54,560	0/0:13,0:14:32.76:0,33,308	0/0:28,0:31:68.29:0,68,730	0/0:25,0:25:66.16:0,66,700	0/0:25,0:26:68.89:0,69,714	0/0:28,0:28:75.17:0,75,798	1/1:4,0:25:4.98:85,5,0	0/0:39,0:41:95.78:0,96,1112	0/0:22,0:22:57.11:0,57,596	1/1:14,9:24:0.21:330,0,0	1/1:5,1:6:5.51:55,6,0	1/1:15,25:43:31.96:433,32,0	0/0:22,0:22:48.09:0,48,510	0/0:14,0:15:35.80:0,36,363	0/0:25,0:25:54.11:0,54,574	0/0:13,0:13:29.73:0,30,317	0/0:19,0:19:48.10:0,48,510	1/1:3,14:19:11.84:183,12,0	0/0:20,0:20:33:0,33,339
chr10	50155927	.	CA	C	1601.40	PASS	AB=0.947;AC=15;AF=0.268;AN=56;BaseQRankSum=8.259;DP=390;FS=22.590;HRun=2;HaplotypeScore=59.3191;InbreedingCoeff=0.8318;MQ=87.40;MQ0=5;MQRankSum=-4.309;QD=12.04;ReadPosRankSum=1.963;VQSLOD=0.7410;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:27:30.17:224,30,0	0/0:5,0:5:8.38:0,8,65	0/0:52,0:30:57.35:0,57,579	0/0:30,0:16:27.17:0,27,258	0/0:8,0:8:15.03:0,15,182	0/0:5,0:5:6.01:0,6,58	0/1:17,1:18:13.26:13,0,78	1/1:13,4:17:41.93:346,42,0	0/0:8,0:8:24.02:0,24,250	0/0:6,2:8:7.64:0,8,118	0/0:7,0:7:17.90:0,18,197	0/0:9,0:9:20.97:0,21,210	0/0:9,0:9:24.05:0,24,286	0/0:13,0:13:29.87:0,30,336	0/0:13,0:13:30.05:0,30,363	1/1:13,0:17:35.39:256,35,0	0/0:19,0:19:31.35:0,31,426	0/0:13,0:13:32.14:0,32,433	1/1:6,4:11:30:264,30,0	1/1:9,10:19:47.80:376,48,0	1/1:0,10:10:6:53,6,0	0/0:14,0:14:30.16:0,30,337	0/0:7,0:7:15.02:0,15,170	0/0:6,0:6:14.93:0,15,154	0/0:15,0:15:32.16:0,32,399	0/0:4,1:5:9:0,9,94	1/1:5,6:14:32.82:263,33,0	0/0:8,0:8:21.07:0,21,302
chr10	50155928	.	AAC	A	2414.55	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=7.354;DP=391;FS=15.025;HRun=0;HaplotypeScore=59.8047;InbreedingCoeff=0.8406;MQ=86.05;MQ0=5;MQRankSum=-4.170;QD=19.47;ReadPosRankSum=1.128;VQSLOD=2.6666;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,22:27:32.21:417,32,0	0/0:5,0:5:9.01:0,9,114	0/0:52,0:29:41.93:0,42,709	0/0:34,0:17:11.99:0,12,303	0/0:7,0:7:15.03:0,15,245	0/0:4,0:4:6.01:0,6,71	0/0:18,0:18:31.19:0,31,248	1/1:4,12:16:41.98:396,42,0	0/0:8,0:8:24.02:0,24,306	0/1:8,0:8:12.42:12,0,154	0/0:7,0:7:17.90:0,18,243	0/0:9,0:9:20.98:0,21,270	0/0:9,0:9:24.06:0,24,394	0/0:13,0:13:29.94:0,30,440	0/0:13,0:13:30.05:0,30,460	1/1:5,10:16:35.93:493,36,0	0/0:18,0:18:41.99:0,42,600	0/0:12,0:12:33.09:0,33,618	1/1:10,2:12:23.88:353,24,0	1/1:18,0:19:48.02:470,48,0	1/1:10,0:10:5.86:92,6,0	0/0:15,0:15:36.05:0,36,501	0/0:7,0:7:15.05:0,15,250	0/0:7,0:7:14.93:0,15,185	0/0:15,0:15:32.18:0,32,511	0/0:5,0:5:9:0,9,110	1/1:15,1:16:35.83:375,36,0	0/0:8,0:8:21.07:0,21,410
chr10	50155939	.	CCCAA	C	1674.27	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=4.256;DP=457;FS=2.662;HRun=0;HaplotypeScore=90.6085;InbreedingCoeff=0.9310;MQ=75.81;MQ0=8;MQRankSum=-5.407;QD=20.17;ReadPosRankSum=3.096;VQSLOD=3.0903;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:66:0,66,711	0/0:5,0:5:12:0,12,112	0/0:68,0:31:56:0,56,868	0/0:47,0:22:37.87:0,38,493	0/0:9,0:9:24.08:0,24,463	0/0:4,0:4:6.02:0,6,109	0/0:19,0:19:44.94:0,45,599	1/1:9,0:9:15.43:250,15,0	0/0:7,0:7:21.07:0,21,340	0/0:14,0:14:8.82:0,9,645	0/0:7,0:7:21.07:0,21,409	0/0:7,0:7:18.06:0,18,344	0/0:9,0:9:27.09:0,27,505	0/0:15,0:15:40.90:0,41,703	0/0:16,0:16:45.52:0,46,833	0/0:23,0:23:62.71:0,63,642	0/0:17,0:17:45.60:0,46,775	0/0:14,0:14:39.13:0,39,822	1/1:16,0:16:31.12:403,31,0	1/1:17,9:26:56.72:630,57,0	1/1:12,0:12:14.39:180,14,0	0/0:15,0:15:39.12:0,39,704	0/0:11,0:11:30.08:0,30,486	0/0:6,0:6:11.91:0,12,223	0/0:15,0:15:45.14:0,45,791	0/0:6,0:6:13.35:0,13,164	1/1:19,1:20:26.54:383,27,0	0/0:9,0:9:27.09:0,27,638
chr10	50155940	.	CCAA	C	1297.52	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=5.782;DP=515;FS=21.086;HRun=0;HaplotypeScore=93.9598;InbreedingCoeff=0.8910;MQ=74.93;MQ0=8;MQRankSum=-5.165;QD=14.42;ReadPosRankSum=4.499;VQSLOD=1.8481;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:65.79:0,66,742	0/1:6,0:6:6.18:6,0,98	0/0:70,0:31:58.69:0,59,695	0/0:48,0:23:35.64:0,36,414	0/0:9,0:9:24.08:0,24,407	0/0:6,0:6:12.03:0,12,169	0/0:20,0:20:47.93:0,48,491	1/1:5,4:9:15.44:177,15,0	0/0:11,0:11:33.01:0,33,469	0/0:18,0:18:43.17:0,43,817	0/0:8,0:8:24.08:0,24,411	0/0:9,0:9:27.09:0,27,441	0/0:16,0:16:48.15:0,48,742	0/0:17,0:17:40.96:0,41,714	0/0:23,0:23:63.69:0,64,1066	0/0:24,0:24:66.13:0,66,742	0/0:24,0:24:59.17:0,59,877	0/0:19,0:19:52.41:0,52,877	1/1:5,11:16:32.21:324,32,0	1/1:29,0:29:53.77:512,54,0	1/1:9,2:11:20.03:171,20,0	0/0:16,0:16:39.08:0,39,585	0/0:13,0:13:31.66:0,32,502	0/0:7,0:7:14.92:0,15,242	0/0:18,0:18:54.15:0,54,830	0/0:10,0:10:25.33:0,25,337	1/1:5,14:19:23.79:284,24,0	0/0:9,0:9:27.09:0,27,535
chr10	50155941	.	CAA	C	1034.74	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=5.451;DP=518;FS=18.032;HRun=9;HaplotypeScore=87.5504;InbreedingCoeff=0.9565;MQ=73.99;MQ0=8;MQRankSum=-4.575;QD=12.32;ReadPosRankSum=5.618;VQSLOD=0.1574;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:30:68.81:0,69,757	0/0:5,0:5:9.01:0,9,107	0/0:69,1:31:13.47:0,13,465	0/0:49,0:22:14.87:0,15,326	0/0:10,0:10:27.04:0,27,348	0/0:6,0:6:12.03:0,12,155	0/0:20,0:20:47.78:0,48,590	1/1:8,1:9:14.95:142,15,0	0/0:12,0:12:30.97:0,31,427	0/0:18,0:18:48.16:0,48,765	0/0:8,0:8:24.08:0,24,359	0/0:9,0:9:27.08:0,27,380	0/0:16,0:16:42.10:0,42,585	0/0:17,0:17:43.92:0,44,604	0/0:26,0:26:72.68:0,73,1061	0/0:24,0:24:65.95:0,66,757	0/0:23,0:23:49.58:0,50,729	0/0:19,0:19:49.32:0,49,639	1/1:13,2:16:26.20:249,26,0	1/1:14,15:29:44.99:433,45,0	1/1:11,0:11:14.94:170,15,0	0/0:16,0:16:36.07:0,36,501	0/0:13,0:13:30.09:0,30,435	0/0:6,0:6:14.92:0,15,205	0/0:18,0:18:45.13:0,45,663	0/0:10,0:10:22.32:0,22,306	1/1:18,1:19:23.35:212,23,0	0/0:9,0:9:27.09:0,27,418
chr10	50157859	.	ACATT	A	3900.70	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=10.197;DP=685;FS=2.026;HRun=0;HaplotypeScore=122.4412;InbreedingCoeff=0.9988;MQ=65.30;MQ0=3;MQRankSum=-2.105;QD=27.86;ReadPosRankSum=-3.545;VQSLOD=2.8791;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:43:87.25:0,87,1491	0/0:11,0:11:27.09:0,27,628	0/0:18,0:17:24.08:0,24,520	0/0:15,0:15:30.09:0,30,574	0/0:34,0:34:75.26:0,75,1781	0/0:17,0:17:36.12:0,36,814	0/0:22,0:22:45.15:0,45,1091	1/1:15,18:33:57.17:884,57,0	0/0:27,0:27:54.19:0,54,1307	0/0:27,0:27:59.86:0,60,1296	0/0:17,0:17:33.11:0,33,787	0/0:32,0:32:75.26:0,75,1829	0/0:32,0:32:78.27:0,78,1810	0/0:25,0:25:51.17:0,51,1191	0/0:26,0:26:60.19:0,60,1384	0/0:11,0:29:45.12:0,45,775	0/0:20,0:20:39.13:0,39,908	0/0:21,0:21:51.15:0,51,1181	1/1:19,13:29:35.63:548,36,0	1/1:5,13:18:39.13:637,39,0	1/1:7,21:28:52.32:848,52,0	0/0:22,0:22:42.14:0,42,981	0/0:13,0:13:30.09:0,30,685	0/0:40,0:40:84.29:0,84,2019	0/0:15,0:15:45.15:0,45,1098	0/0:26,0:26:54.19:0,54,1273	1/1:8,21:29:60.20:983,60,0	0/0:13,0:13:36.12:0,36,865
chr10	50158372	.	CTG	C	512.52	PASS	AB=0.946;AC=13;AF=0.241;AN=54;BaseQRankSum=3.612;DP=645;FS=3.550;HRun=0;HaplotypeScore=88.0551;InbreedingCoeff=-0.0148;MQ=55.77;MQ0=28;MQRankSum=2.009;QD=2.20;ReadPosRankSum=1.040;VQSLOD=1.3508;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:31:34.23:0,34,327	0/1:11,0:9:24.86:25,0,28	0/0:50,0:19:0:0,0,0	./.	0/1:21,1:22:14.29:14,0,133	0/0:13,0:19:8.69:0,9,82	1/1:15,6:20:12.18:130,12,0	0/0:33,0:32:18.66:0,19,150	0/0:13,0:13:2.42:0,2,40	0/1:23,0:23:38.61:39,0,112	0/0:13,0:13:12:0,12,132	0/1:17,1:20:71.21:71,0,96	0/1:19,0:19:11.40:11,0,136	0/1:21,0:22:26.58:27,0,65	0/0:24,0:24:27.07:0,27,367	0/1:29,1:28:19.76:20,0,177	0/0:17,0:29:15:0,15,142	1/1:21,6:29:5.32:240,5,0	0/0:22,0:20:6.90:0,7,70	0/0:6,0:9:2.72:0,3,12	0/0:22,0:21:12.45:0,12,121	0/1:13,0:13:20.17:20,0,100	0/0:13,0:13:12.48:0,12,125	0/0:31,0:31:29.11:0,29,311	0/1:15,2:19:66:66,0,177	0/0:31,0:30:9.50:0,9,123	0/0:12,0:20:9.72:0,10,74	0/0:11,0:11:6.02:0,6,77
chr10	50158791	.	T	TTTGCTAGTCCCCCCCCCCG	15771.74	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=4.190;DP=624;FS=4.818;HRun=0;HaplotypeScore=277.4201;InbreedingCoeff=0.9690;MQ=71.66;MQ0=0;MQRankSum=-10.664;QD=46.25;ReadPosRankSum=-9.558;VQSLOD=1.1497;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:21:48.02:1044,48,0	0/0:10,0:10:21.04:0,21,855	0/0:15,0:15:45.14:0,45,1824	0/0:19,0:19:52.86:0,53,1451	0/0:19,0:19:57.20:0,57,2639	1/1:10,0:10:24.03:612,24,0	1/1:10,0:34:22.88:771,23,0	1/1:29,0:29:66.18:1852,66,0	1/1:24,0:24:45.93:1202,46,0	0/0:31,0:31:93.30:0,93,4219	0/0:4,0:4:12.04:0,12,626	1/1:5,0:40:12.93:391,13,0	1/1:29,0:29:69.02:1515,69,0	0/0:29,0:29:75.23:0,75,3395	0/0:36,0:36:99:0,105,5131	1/1:23,0:23:51.08:1629,51,0	0/0:41,0:41:99:0,117,5176	0/0:31,0:31:75.16:0,75,3008	1/1:11,2:20:53.93:2114,54,0	1/1:9,0:8:12.02:341,12,0	1/1:7,0:25:6.02:207,6,0	1/1:18,0:18:42.34:730,42,0	1/1:9,0:9:18.04:624,18,0	1/1:9,0:30:14.92:1064,15,0	0/0:17,0:17:48.15:0,48,2260	0/0:22,0:22:63.22:0,63,3236	1/1:20,0:20:45.13:1675,45,0	0/0:9,0:9:27.09:0,27,1391
chr10	50158795	.	C	CT	1866.53	PASS	AB=0.705;AC=11;AF=0.196;AN=56;BaseQRankSum=7.124;DP=558;FS=61.469;HRun=0;HaplotypeScore=68.6372;InbreedingCoeff=-0.2404;MQ=75.86;MQ0=0;MQRankSum=-6.516;QD=8.80;ReadPosRankSum=-0.952;VQSLOD=1.3289;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:13,8:21:99:148,0,376	0/0:8,0:8:24.05:0,24,309	0/0:17,0:17:39.19:0,39,657	0/0:19,0:19:56.87:0,57,725	0/0:21,0:21:63.21:0,63,879	0/1:5,3:8:74.43:74,0,188	0/0:17,0:17:21.04:0,21,259	0/1:14,17:31:99:631,0,406	0/1:12,11:23:99:107,0,335	0/0:33,0:33:93.30:0,93,1284	0/0:4,0:4:12.04:0,12,168	0/1:19,0:19:0.07:0,0,75	0/1:19,12:31:99:213,0,642	0/0:27,0:27:81.27:0,81,1130	0/0:37,0:37:99:0,108,1493	0/1:11,13:24:99:284,0,328	0/0:41,0:41:99:0,120,1675	0/0:31,0:31:87.26:0,87,1186	0/0:15,0:15:14.64:0,15,406	0/1:4,6:9:32.73:33,0,145	0/0:12,0:12:9.03:0,9,124	0/1:10,8:18:99:200,0,296	0/1:3,5:8:35.60:36,0,112	0/0:15,0:15:8.10:0,8,181	0/0:16,0:16:48.16:0,48,671	0/0:24,0:24:72.23:0,72,991	0/1:10,9:19:99:283,0,348	0/0:9,0:9:27.09:0,27,378
chr10	50159005	.	T	TGGCTG	3639.45	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=4.585;DP=616;FS=7.978;HRun=0;HaplotypeScore=147.4434;InbreedingCoeff=0.9027;MQ=77.95;MQ0=3;MQRankSum=-9.664;QD=39.13;ReadPosRankSum=-2.452;VQSLOD=2.4587;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:93.31:0,93,1418	0/0:7,0:7:21.07:0,21,431	0/0:31,0:30:72.22:0,72,1385	0/0:31,0:27:72.14:0,72,1344	0/0:24,0:24:57.19:0,57,1154	0/0:17,0:17:25.38:0,25,676	0/0:20,0:20:54.18:0,54,776	1/1:15,8:22:51.09:1342,51,0	0/0:14,0:14:39.13:0,39,579	0/0:26,0:26:69.22:0,69,1292	0/0:19,0:19:39.13:0,39,770	0/0:28,0:28:75.26:0,75,1516	0/0:21,0:21:54.19:0,54,1101	0/0:28,0:28:81.28:0,81,1607	0/0:37,0:37:99:0,108,2152	0/0:27,0:27:78.27:0,78,1580	0/0:41,0:41:99:0,120,2394	0/0:35,0:34:93.21:0,93,1850	1/1:5,7:12:18.01:411,18,0	1/1:12,11:23:27.05:714,27,0	1/1:13,8:21:21.07:639,21,0	0/0:4,0:4:12.04:0,12,245	0/0:14,0:14:30.10:0,30,610	0/0:29,0:29:81.21:0,81,1567	0/0:13,0:13:30.10:0,30,605	0/0:18,0:18:48.16:0,48,947	1/1:3,6:8:18.06:528,18,0	0/1:5,0:5:4.40:4,0,231
chr10	50159180	.	TA	T	324.55	PASS	AB=0.889;AC=3;AF=0.054;AN=56;BaseQRankSum=6.636;DP=490;FS=5.256;HRun=11;HaplotypeScore=52.7969;InbreedingCoeff=0.6392;MQ=59.09;MQ0=5;MQRankSum=-2.637;QD=7.92;ReadPosRankSum=-0.681;VQSLOD=1.6063;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,21:25:50.94:419,51,0	0/0:8,0:8:15.04:0,15,160	0/0:11,0:7:11.96:0,12,114	0/0:7,0:5:11.50:0,12,80	0/0:24,0:25:64.03:0,64,665	0/1:14,2:16:4.13:4,0,371	0/0:17,0:17:17.54:0,18,385	0/0:32,0:30:63.16:0,63,670	0/0:12,0:12:33.08:0,33,349	0/0:19,1:21:23.30:0,23,432	0/0:17,0:17:45.09:0,45,469	0/0:18,1:19:23.48:0,23,455	0/0:16,0:16:42.09:0,42,439	0/0:17,1:18:29.47:0,29,505	0/0:22,0:22:63.16:0,63,672	0/0:17,0:16:42.11:0,42,448	0/0:34,0:33:96.71:0,97,1025	0/0:31,1:31:65.49:0,65,868	0/0:12,0:9:24.02:0,24,244	0/0:15,0:15:32.94:0,33,328	0/0:6,0:6:15.01:0,15,148	0/0:6,0:8:11.02:0,11,136	0/0:8,0:8:18.52:0,19,193	0/0:14,0:14:39.10:0,39,416	0/0:24,0:24:51.11:0,51,536	0/0:26,1:27:50.46:0,50,709	0/0:20,0:20:50.99:0,51,516	0/0:7,0:7:21.03:0,21,215
chr10	50159580	.	AC	A	369.65	PASS	AB=0.931;AC=14;AF=0.250;AN=56;BaseQRankSum=2.193;DP=383;FS=3.720;HRun=12;HaplotypeScore=95.5803;InbreedingCoeff=0.2297;MQ=71.62;MQ0=0;MQRankSum=-5.745;QD=2.09;ReadPosRankSum=1.562;VQSLOD=-0.1793;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:16,5:24:14.96:87,15,0	0/0:2,1:3:5.89:0,6,56	0/0:9,0:9:20.07:0,20,146	0/0:9,0:9:14.31:0,14,103	0/0:7,0:7:2.66:0,3,24	0/0:20,2:22:11.99:0,12,103	0/1:27,2:29:26.51:27,0,396	1/1:8,3:9:5.96:46,6,0	0/1:11,0:12:11.99:12,0,81	0/0:11,0:11:4.24:0,4,27	0/0:4,0:4:6:0,6,53	0/0:19,0:19:8.97:0,9,75	0/0:9,0:9:11.97:0,12,99	0/1:13,0:13:9.39:9,0,63	0/0:18,1:19:12.80:0,13,288	0/1:14,1:15:20.27:20,0,195	0/0:19,0:21:7.76:0,8,156	0/0:17,0:19:33.49:0,33,207	0/1:18,2:21:25.23:62,0,25	0/0:5,0:5:0.47:0,0,1	1/1:21,5:26:8.19:68,8,0	0/0:4,1:5:2.99:0,3,24	0/0:7,0:7:3.01:0,3,31	0/0:19,0:19:30.94:0,31,302	0/1:10,1:11:9.89:10,0,67	0/0:13,0:13:2.95:0,3,25	1/1:11,3:15:25.90:187,26,0	0/0:5,0:5:5.83:0,6,37
chr10	50160371	.	TC	T	5789.64	PASS	AB=1.000;AC=24;AF=0.429;AN=56;BaseQRankSum=15.515;DP=717;FS=25.762;HRun=2;HaplotypeScore=92.5842;InbreedingCoeff=0.2895;MQ=77.74;MQ0=0;MQRankSum=-2.663;QD=12.45;ReadPosRankSum=6.006;VQSLOD=1.9823;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,45:45:99:1513,117,0	1/1:0,11:11:30.10:388,30,0	0/0:19,0:19:16.65:0,17,588	0/0:13,0:13:4.89:0,5,334	0/0:25,0:25:71.12:0,71,938	1/1:0,14:14:33.11:425,33,0	1/1:0,29:29:69.22:893,69,0	0/1:33,0:33:3.10:3,0,113	1/1:0,25:25:60.19:774,60,0	0/0:32,0:32:95.30:0,95,1300	0/0:18,0:18:54.16:0,54,758	0/1:35,0:35:24.60:25,0,54	0/1:25,0:25:15.34:15,0,52	0/0:29,0:29:81.21:0,81,1097	1/1:0,20:20:60.20:776,60,0	1/1:1,23:24:63.20:815,63,0	0/0:32,0:32:93.24:0,93,1303	0/0:16,0:16:44.14:0,44,650	0/1:31,0:31:11.87:12,0,85	0/1:31,0:31:27.64:28,0,35	0/1:35,0:35:20.70:21,0,92	0/1:23,0:23:15.14:15,0,79	0/1:28,0:28:21.74:22,0,88	0/1:23,0:23:12.31:17,0,12	0/0:28,0:28:81.27:0,81,1189	0/0:26,0:26:75.22:0,75,1049	0/1:33,0:33:31.13:46,0,31	0/0:14,0:14:42.14:0,42,625
chr10	50160373	.	CT	C	8304.62	PASS	AB=0.900;AC=35;AF=0.625;AN=56;BaseQRankSum=14.126;DP=704;FS=5.199;HRun=9;HaplotypeScore=83.5123;InbreedingCoeff=0.8891;MQ=77.52;MQ0=0;MQRankSum=-2.354;QD=17.45;ReadPosRankSum=1.270;VQSLOD=5.0882;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:49,0:49:69.40:485,69,0	1/1:12,0:12:27.43:120,27,0	0/1:16,2:18:11.76:12,0,353	0/0:13,0:13:0.10:0,0,204	0/0:24,1:25:32.71:0,33,630	1/1:14,0:14:31.22:158,31,0	1/1:29,0:29:63.95:289,64,0	1/1:4,27:31:78.03:714,78,0	1/1:26,0:26:56.12:270,56,0	0/0:32,0:32:78.23:0,78,900	0/0:18,0:18:51.15:0,51,589	1/1:3,32:35:90.04:824,90,0	1/1:3,20:23:51.02:467,51,0	0/0:27,0:27:66.20:0,66,762	1/1:20,0:20:55.18:245,55,0	1/1:23,0:23:57.89:255,58,0	0/0:30,0:30:81.24:0,81,935	0/0:16,1:17:20.66:0,21,481	1/1:4,26:30:78:706,78,0	1/1:1,30:31:81.03:741,81,0	1/1:5,27:32:78.03:714,78,0	1/1:3,20:23:51.02:467,51,0	1/1:4,22:26:66.02:604,66,0	1/1:1,20:21:51.03:467,51,0	0/0:27,0:27:78.22:0,78,893	0/0:25,0:25:63.17:0,63,711	1/1:2,31:33:84.04:769,84,0	0/0:14,0:14:42.11:0,42,474
chr10	50161662	.	T	TGAGA	1484.68	PASS	AB=0.886;AC=31;AF=0.574;AN=54;BaseQRankSum=-3.409;DP=606;FS=3.915;HRun=0;HaplotypeScore=117.3656;InbreedingCoeff=0.3465;MQ=65.43;MQ0=11;MQRankSum=0.408;QD=3.74;ReadPosRankSum=-2.984;VQSLOD=1.5665;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:33,0:32:10.93:225,11,0	0/0:8,0:12:6.01:0,6,56	./.	0/1:43,0:18:0:1,0,0	0/1:19,6:27:58.36:58,0,109	0/0:17,0:26:15.01:0,15,140	0/0:19,0:23:11.89:0,12,98	1/1:12,0:12:1.66:4,2,0	0/0:15,0:22:20.77:0,21,195	1/1:18,0:18:17.99:194,18,0	1/1:16,0:16:15.02:196,15,0	0/1:20,0:20:37.86:38,0,80	0/1:18,0:19:19.02:33,0,19	1/1:16,0:16:15.02:202,15,0	0/0:16,0:24:18.02:0,18,168	0/0:21,0:25:12.03:0,12,185	0/1:21,15:41:51.29:196,0,51	1/1:9,2:15:8.77:153,9,0	1/1:20,0:19:2.92:17,3,0	0/0:19,0:19:9.45:0,9,114	0/0:28,0:31:17.37:0,17,180	1/1:10,0:14:5.49:24,5,0	1/1:18,0:20:2.74:12,3,0	0/1:14,0:22:15.85:16,0,38	1/1:11,0:18:5.74:39,6,0	1/1:13,0:19:17.59:171,18,0	0/1:12,0:13:12.92:13,0,22	1/1:9,1:10:3.48:72,3,0
chr10	50162997	.	TCC	T	1113.54	PASS	AB=0.850;AC=14;AF=0.250;AN=56;BaseQRankSum=7.675;DP=548;FS=192.249;HRun=3;HaplotypeScore=241.7593;InbreedingCoeff=-0.1971;MQ=32.32;MQ0=3;MQRankSum=-2.852;QD=3.62;ReadPosRankSum=2.155;VQSLOD=-0.5288;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:59.68:0,60,1015	0/1:13,3:16:86.82:87,0,411	0/0:3,0:2:6.02:0,6,108	0/0:5,1:2:3.01:0,3,57	0/1:22,4:26:66.22:66,0,276	0/0:16,0:16:47.96:0,48,753	0/0:16,0:16:38.43:0,38,619	0/0:6,0:5:11.99:0,12,190	0/0:16,0:16:34.67:0,35,621	0/1:31,4:34:67.99:68,0,916	0/1:17,7:25:99:135,0,413	0/0:20,0:20:23.83:0,24,894	0/0:25,1:26:10.81:0,11,859	0/0:24,0:25:74.37:0,74,1223	0/0:18,0:18:50.90:0,51,851	0/0:27,1:27:44.93:0,45,1196	0/1:7,1:7:14.80:15,0,178	0/1:9,1:10:14.20:14,0,326	0/0:9,0:8:24.07:0,24,387	0/1:23,5:28:99:125,0,398	0/0:15,0:16:35.99:0,36,650	0/1:26,10:36:99:210,0,807	0/1:20,6:26:51.32:51,0,560	0/0:14,1:15:24.37:0,24,291	0/1:36,12:48:99:340,0,850	0/1:27,3:31:50.48:50,0,1257	0/1:13,1:14:33.18:33,0,399	1/1:2,2:4:6.02:74,6,0
chr10	50163489	.	T	TACC	16374.19	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-14.006;DP=759;FS=7.147;HRun=0;HaplotypeScore=107.4078;InbreedingCoeff=0.9905;MQ=90.30;MQ0=0;MQRankSum=-10.258;QD=49.62;ReadPosRankSum=2.261;VQSLOD=7.2510;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,25:32:66.18:1427,66,0	0/0:7,0:7:18.06:0,18,294	0/0:35,0:35:90.30:0,90,1438	0/0:27,0:27:69.24:0,69,1123	0/0:15,0:15:39.13:0,39,636	0/0:21,0:21:60.20:0,60,980	0/0:35,0:35:93.26:0,93,1439	1/1:7,25:32:84.29:1853,84,0	0/0:31,0:31:84.29:0,84,1364	0/0:36,0:36:93.32:0,93,1516	0/0:16,0:16:48.15:0,48,761	1/1:0,28:30:75.21:1627,75,0	1/1:5,30:35:75.26:1674,75,0	0/0:30,0:30:72.23:0,72,1152	0/0:34,0:34:99:0,99,1590	0/0:30,0:30:90.29:0,90,1442	0/0:25,0:25:72.25:0,72,1176	0/0:23,0:23:63.21:0,63,1022	1/1:7,8:16:36.11:741,36,0	1/1:2,16:18:45.11:957,45,0	1/1:10,47:59:99:2718,123,0	1/1:2,13:15:33.11:736,33,0	1/1:1,13:14:36.12:803,36,0	1/1:5,36:42:93.79:2077,94,0	0/0:29,0:29:72.22:0,72,1128	0/0:32,0:32:96.30:0,96,1501	1/1:5,30:37:81.23:1760,81,0	0/0:3,0:3:9.03:0,9,147
chr10	50163758	.	GT	G	10909.39	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=10.044;DP=598;FS=10.170;HRun=6;HaplotypeScore=62.8695;InbreedingCoeff=0.9890;MQ=85.72;MQ0=0;MQRankSum=-1.330;QD=28.19;ReadPosRankSum=1.475;VQSLOD=5.0633;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,41:46:99:1289,120,0	1/1:1,5:6:15.04:161,15,0	0/0:18,0:18:41.89:0,42,496	0/0:24,0:24:55.51:0,56,658	0/0:21,0:21:60.18:0,60,776	1/1:1,22:23:66.17:709,66,0	1/1:1,19:20:54.14:580,54,0	1/1:9,25:34:75.18:806,75,0	1/1:0,24:24:66.17:709,66,0	0/0:17,0:17:48.15:0,48,615	0/0:14,0:14:27.09:0,27,355	1/1:0,25:25:69.17:741,69,0	1/1:1,22:23:63.16:677,63,0	0/0:26,0:26:75.24:0,75,987	1/1:1,32:33:90.23:967,90,0	1/1:0,22:22:57.14:613,57,0	0/0:25,0:25:66.21:0,66,867	0/0:20,0:20:60.20:0,60,789	1/1:3,19:22:57.11:596,57,0	1/1:1,18:19:48.12:515,48,0	1/1:0,23:23:60.15:645,60,0	1/1:0,15:15:45.11:483,45,0	1/1:2,5:7:9.02:97,9,0	1/1:2,18:20:51.13:548,51,0	0/0:16,0:16:45.14:0,45,578	0/0:22,0:22:66.19:0,66,841	1/1:0,25:25:72.18:773,72,0	0/0:8,0:8:24.08:0,24,316
chr10	50164976	.	AAAC	A	5146.78	PASS	AB=0.558;AC=9;AF=0.161;AN=56;BaseQRankSum=12.685;DP=686;FS=0.000;HRun=0;HaplotypeScore=101.3310;InbreedingCoeff=0.8834;MQ=78.57;MQ0=0;MQRankSum=-2.949;QD=39.29;ReadPosRankSum=1.068;VQSLOD=5.7115;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:81.28:0,81,1785	0/0:16,0:16:36.53:0,37,739	0/0:28,0:28:60.36:0,60,1558	0/0:21,0:21:42.04:0,42,866	0/0:35,0:35:96.33:0,96,2075	0/0:30,0:30:60.21:0,60,1301	0/0:15,0:15:42.14:0,42,898	0/0:34,0:34:99:0,99,2081	0/0:34,0:34:90.31:0,90,1931	0/0:19,0:19:51.18:0,51,1124	0/0:13,0:13:39.13:0,39,840	1/1:0,27:27:75.26:1205,75,0	0/1:5,19:24:9.04:810,0,9	0/0:22,0:22:63.22:0,63,1390	0/0:29,0:29:72.25:0,72,1571	0/0:22,0:22:57.20:0,57,1258	0/0:18,0:18:54.19:0,54,1171	0/0:29,0:29:81.28:0,81,1770	0/0:23,0:23:63.22:0,63,1386	0/0:30,0:30:87.30:0,87,1909	0/0:22,0:22:66.23:0,66,1391	1/1:2,25:27:69.15:1052,69,0	1/1:2,32:34:90.31:1445,90,0	1/1:1,18:19:41.49:635,41,0	0/0:24,0:24:66.23:0,66,1440	0/0:25,0:25:66.23:0,66,1413	0/0:21,0:21:60.21:0,60,1324	0/0:16,0:16:48.16:0,48,1059
chr10	50165027	.	TTTCCTC	T	3634.64	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=9.755;DP=651;FS=28.996;HRun=0;HaplotypeScore=141.4024;InbreedingCoeff=0.9843;MQ=61.04;MQ0=4;MQRankSum=-11.127;QD=30.80;ReadPosRankSum=0.930;VQSLOD=1.7424;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:61.43:0,61,1908	1/1:5,6:11:9.03:181,9,0	0/0:25,0:11:17.94:0,18,259	0/0:19,0:13:21.07:0,21,513	0/0:34,0:34:69.24:0,69,2166	1/1:6,26:32:51.17:1021,51,0	1/1:0,14:14:36.12:729,36,0	0/0:35,0:35:24.08:0,24,694	1/1:7,15:22:30.10:621,30,0	0/0:14,0:14:39.13:0,39,1134	0/0:14,0:14:27.09:0,27,862	0/0:28,0:28:54.17:0,54,1549	0/0:19,0:19:30.10:0,30,940	0/0:24,0:24:57.18:0,57,1745	1/1:6,16:22:27.09:558,27,0	1/1:3,14:17:27.06:525,27,0	0/0:16,0:16:33.09:0,33,896	0/0:25,0:25:45.15:0,45,1353	0/0:28,0:28:39.13:0,39,1166	0/0:36,0:36:81.27:0,81,2439	0/0:22,0:22:42.07:0,42,986	0/0:27,0:27:66.21:0,66,1849	0/0:25,0:25:47.86:0,48,1068	0/0:21,0:21:42.13:0,42,1165	0/0:19,0:19:45.14:0,45,1165	0/0:26,0:26:51.17:0,51,1552	0/0:28,0:28:60.19:0,60,1853	0/0:18,0:18:39.07:0,39,1013
chr10	50165279	.	GAGAA	G	1784.97	PASS	AB=0.971;AC=19;AF=0.352;AN=54;BaseQRankSum=4.506;DP=659;FS=7.557;HRun=0;HaplotypeScore=125.9649;InbreedingCoeff=0.7196;MQ=61.56;MQ0=4;MQRankSum=1.844;QD=6.66;ReadPosRankSum=0.814;VQSLOD=2.0349;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:35:17.86:145,18,0	0/0:9,0:14:11.95:0,12,150	1/1:14,0:6:1.82:5,2,0	./.	1/1:19,0:35:29.56:215,30,0	0/0:39,0:40:63.06:0,63,825	0/0:27,0:27:30.03:0,30,413	0/0:25,0:25:17.86:0,18,130	0/0:29,0:29:45.13:0,45,700	0/0:22,0:22:39.11:0,39,713	0/0:17,0:17:21.04:0,21,362	1/1:14,13:27:27.09:419,27,0	1/1:12,12:24:24.08:373,24,0	0/0:21,0:21:39.07:0,39,610	0/0:27,0:27:45.11:0,45,631	0/0:23,0:27:51.12:0,51,714	0/0:12,0:22:13.27:0,13,185	0/0:28,0:27:51.09:0,51,869	0/1:19,0:19:28.14:28,0,249	0/1:24,1:25:1.50:1,0,701	0/0:8,0:8:6.01:0,6,96	1/1:13,5:18:9.03:128,9,0	1/1:9,18:27:16.05:265,16,0	1/1:7,17:24:26.68:383,27,0	0/0:26,0:27:29.19:0,29,947	0/1:19,1:20:13.50:14,0,614	0/0:27,0:27:42.14:0,42,943	0/0:17,0:17:48.14:0,48,1020
chr10	50165348	.	A	AG	883.28	PASS	AB=0.808;AC=5;AF=0.089;AN=56;BaseQRankSum=1.540;DP=771;FS=0.000;HRun=1;HaplotypeScore=114.6690;InbreedingCoeff=-0.0987;MQ=63.93;MQ0=2;MQRankSum=-8.886;QD=6.45;ReadPosRankSum=-2.963;VQSLOD=-0.6730;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:91.76:0,92,1090	0/1:8,1:9:39.45:39,0,245	0/0:17,0:12:32.45:0,32,376	0/0:20,0:17:42.07:0,42,526	0/0:40,0:40:99:0,111,1431	0/1:25,11:36:99:276,0,807	0/0:25,4:29:20.41:0,20,673	0/0:37,0:36:99:0,108,1342	0/1:18,9:26:99:258,0,550	0/0:34,0:34:99:0,99,1255	0/0:12,0:12:30.07:0,30,362	0/0:34,0:34:90.22:0,90,1121	0/0:37,0:37:99:0,105,1311	0/0:23,0:23:66.21:0,66,844	0/1:21,6:28:99:240,0,619	0/1:29,8:37:99:188,0,959	0/0:23,0:23:52.05:0,52,664	0/0:21,0:20:17.39:0,17,605	0/0:16,0:16:45.13:0,45,568	0/0:37,0:37:99:0,111,1387	0/0:10,0:10:30.09:0,30,378	0/0:25,0:25:75.24:0,75,973	0/0:33,0:33:87.26:0,87,1113	0/0:27,0:27:69.22:0,69,895	0/0:20,0:20:57.16:0,57,723	0/0:33,0:33:99:0,99,1240	0/0:38,0:38:99:0,114,1453	0/0:33,0:33:99:0,99,1268
chr10	50166240	.	GATGGCATCC	G	8232.91	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=13.638;DP=592;FS=0.420;HRun=0;HaplotypeScore=174.4380;InbreedingCoeff=0.9988;MQ=85.69;MQ0=0;MQRankSum=-14.963;QD=73.51;ReadPosRankSum=1.737;VQSLOD=4.9526;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,108,4172	1/1:1,12:13:36.12:1066,36,0	0/0:27,0:27:69.24:0,69,2765	0/0:20,0:21:54.19:0,54,2176	0/0:14,0:14:39.13:0,39,1875	1/1:2,12:14:27.09:827,27,0	1/1:2,16:18:45.15:1290,45,0	0/0:21,0:21:60.20:0,60,2605	1/1:3,17:20:48.16:1469,48,0	0/0:12,0:12:36.12:0,36,1693	0/0:18,0:18:54.17:0,54,2482	0/0:34,0:34:99:0,102,4774	0/0:19,0:19:57.20:0,57,2641	0/0:25,0:25:72.25:0,72,3464	1/1:1,22:23:54.19:1653,54,0	1/1:0,24:24:63.21:1929,63,0	0/0:31,0:31:93.32:0,93,4256	0/0:37,0:37:99:0,108,4836	0/0:14,0:14:30.10:0,30,1275	0/0:15,0:15:45.15:0,45,2121	0/0:39,0:39:99:0,111,4930	0/0:17,0:17:45.15:0,45,1966	0/0:13,0:13:36.12:0,36,1703	0/0:19,0:19:57.20:0,57,2690	0/0:16,0:16:48.16:0,48,2285	0/0:17,0:17:48.16:0,48,2263	0/0:28,0:28:84.29:0,84,3869	0/0:7,0:7:21.07:0,21,1021
chr10	50167566	.	T	TAG	731.89	PASS	AB=0.917;AC=24;AF=0.462;AN=52;BaseQRankSum=9.130;DP=519;FS=0.675;HRun=0;HaplotypeScore=117.4009;InbreedingCoeff=0.6591;MQ=77.73;MQ0=9;MQRankSum=-2.413;QD=3.21;ReadPosRankSum=-0.397;VQSLOD=2.3891;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:23:4.38:28,4,0	0/1:4,4:8:4.03:140,0,4	0/0:34,0:28:64.31:0,64,818	0/0:36,0:28:32.65:0,33,736	0/0:19,0:19:53.94:0,54,679	1/1:19,0:17:8.81:53,9,0	1/1:28,1:28:36.55:332,37,0	0/0:33,0:33:0.53:0,1,8	1/1:12,0:12:8.79:55,9,0	0/0:21,0:21:59.98:0,60,758	0/0:13,0:13:30.02:0,30,372	1/1:21,0:21:0.89:2,1,0	0/1:15,0:15:1.78:2,0,3	0/0:23,0:22:54.18:0,54,741	1/1:15,0:15:9.43:122,9,0	1/1:21,0:21:8.94:85,9,0	0/0:17,0:17:48.12:0,48,628	0/0:16,0:15:39.10:0,39,508	1/1:11,0:11:3.64:29,4,0	1/1:14,0:10:1.05:22,1,0	./.	./.	0/1:16,0:16:0:0,0,0	0/1:13,0:13:0.29:0,0,0	0/0:20,0:20:39:0,39,534	0/0:30,0:30:60.22:0,60,933	1/1:10,0:10:4.77:29,5,0	0/0:14,0:14:39.07:0,39,507
chr10	50167570	.	GAT	G	1996.11	PASS	AB=0.659;AC=30;AF=0.556;AN=54;BaseQRankSum=12.008;DP=514;FS=8.611;HRun=0;HaplotypeScore=109.1384;InbreedingCoeff=0.8406;MQ=72.05;MQ0=9;MQRankSum=-2.059;QD=7.45;ReadPosRankSum=0.871;VQSLOD=2.8933;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:24:27.90:223,28,0	0/1:6,2:8:1.78:118,0,2	0/0:29,0:23:57.05:0,57,965	0/0:34,0:26:38.44:0,38,896	0/0:20,0:20:53.94:0,54,875	1/1:2,18:18:9.03:120,9,0	1/1:16,13:28:37.19:451,37,0	1/1:1,0:31:18.48:126,18,0	1/1:0,12:12:9.03:124,9,0	0/0:22,0:22:66.18:0,66,1108	0/0:14,0:14:30.09:0,30,504	1/1:1,0:19:1.82:5,2,0	1/1:14,0:14:20.88:186,21,0	0/0:22,0:21:54.18:0,54,958	1/1:11,7:18:20.50:256,20,0	1/1:3,18:21:11.79:121,12,0	0/0:18,0:18:48.13:0,48,802	0/0:17,0:16:39.51:0,40,699	1/1:1,0:10:10.36:72,10,0	1/1:13,0:9:5.80:70,6,0	1/1:7,0:7:5.99:50,6,0	./.	0/1:1,0:15:0:0,0,1	1/1:14,0:14:17.96:148,18,0	0/0:21,0:21:39.13:0,39,723	0/0:30,0:30:77.51:0,78,1333	1/1:11,0:11:18.66:132,19,0	0/0:13,0:13:39.13:0,39,690
chr10	50167584	.	T	TAG	1117.04	PASS	AB=0.986;AC=41;AF=0.820;AN=50;BaseQRankSum=0.405;DP=568;FS=14.147;HRun=0;HaplotypeScore=131.4962;InbreedingCoeff=0.2412;MQ=55.15;MQ0=13;MQRankSum=0.486;QD=2.47;ReadPosRankSum=-1.635;VQSLOD=1.5658;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:22:2.99:24,3,0	1/1:7,0:7:6.35:37,6,0	./.	./.	1/1:20,1:21:3.01:44,3,0	1/1:25,0:22:8.86:63,9,0	1/1:25,0:24:10.46:48,10,0	1/1:53,0:52:32.39:101,32,0	1/1:11,0:11:0.47:1,0,0	1/1:19,5:23:21.39:234,21,0	1/1:12,0:12:5.99:48,6,0	0/0:25,0:25:1.43:0,1,9	1/1:17,0:15:1.20:24,1,0	0/1:21,1:20:0.01:0,0,0	1/1:20,0:20:3.39:30,3,0	1/1:23,0:23:11.86:87,12,0	1/1:14,7:21:3.01:44,3,0	1/1:17,0:16:3.95:153,4,0	1/1:21,0:21:3.11:9,3,0	0/0:16,0:12:0:0,0,0	1/1:12,0:12:3:25,3,0	./.	0/1:15,0:14:0:0,0,0	1/1:19,0:18:1.24:3,1,0	0/0:21,0:21:3:0,3,32	0/1:32,0:32:32.34:162,0,32	1/1:15,0:15:2.98:21,3,0	1/1:15,0:13:6:62,6,0
chr10	50167629	.	A	AGG	2380.99	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=5.318;DP=655;FS=13.368;HRun=2;HaplotypeScore=122.0678;InbreedingCoeff=0.8540;MQ=70.74;MQ0=14;MQRankSum=-1.636;QD=10.68;ReadPosRankSum=1.127;VQSLOD=-0.5527;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:35,0:35:77.62:643,78,0	1/1:8,0:8:12.95:119,13,0	0/0:37,0:19:39.23:0,39,342	0/0:60,0:30:39.90:0,40,445	0/0:20,0:20:13.68:0,14,229	0/0:26,0:25:41.06:0,41,309	0/0:24,0:23:41.73:0,42,327	0/0:58,0:56:88.08:0,88,782	1/1:12,0:12:21.89:188,22,0	0/0:28,0:27:14.45:0,14,497	0/0:8,0:8:8.01:0,8,74	1/1:23,0:23:30.03:234,30,0	1/1:18,0:17:44.67:387,45,0	0/0:22,0:19:26.96:0,27,223	1/1:11,27:38:4.19:59,4,0	1/1:26,1:27:45.37:469,45,0	0/0:23,0:21:24.50:0,24,299	0/1:21,0:20:11.78:12,0,231	0/0:16,0:15:30.36:0,30,275	0/0:21,0:19:41.94:0,42,353	0/0:16,0:16:27.06:0,27,225	1/1:11,0:11:11.69:106,12,0	1/1:15,0:15:20.99:181,21,0	1/1:15,0:14:23.60:197,24,0	0/0:16,0:16:35.97:0,36,322	0/0:31,0:31:40.61:0,41,579	0/0:13,0:13:22.53:0,23,185	0/0:13,0:11:2.73:0,3,129
chr10	50167888	.	GCCATTTAGATTA	G	6131.89	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=12.303;DP=583;FS=16.624;HRun=0;HaplotypeScore=213.4203;InbreedingCoeff=0.9887;MQ=91.85;MQ0=0;MQRankSum=-11.879;QD=67.38;ReadPosRankSum=2.455;VQSLOD=3.2552;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:78.27:0,78,4192	0/0:5,0:5:15.05:0,15,924	0/0:32,0:32:96.32:0,96,5000	0/0:21,0:21:32.16:0,32,2830	0/0:26,0:26:75.26:0,75,4054	0/0:18,0:18:54.19:0,54,3210	0/0:29,0:29:87.26:0,87,4721	0/0:31,0:31:87.28:0,87,4577	0/0:21,0:21:63.22:0,63,3713	0/0:18,0:18:48.16:0,48,2618	0/0:18,0:18:51.18:0,51,2609	1/1:2,21:23:51.17:1857,51,0	1/1:4,25:29:56.77:2079,57,0	0/0:30,0:30:87.30:0,87,4756	0/0:24,0:24:72.25:0,72,4282	0/0:20,0:20:51.17:0,51,2989	0/0:23,0:23:69.24:0,69,4156	0/0:17,0:17:48.16:0,48,2957	0/0:14,0:14:39.13:0,39,2038	0/0:13,0:12:33.11:0,33,2019	0/0:16,0:16:45.15:0,45,2484	1/1:2,13:15:33.03:1084,33,0	1/1:4,13:17:32.96:872,33,0	1/1:0,7:7:11.96:241,12,0	0/0:23,0:23:69.21:0,69,3825	0/0:29,0:29:78.27:0,78,4616	0/0:24,0:24:72.25:0,72,4152	0/0:13,0:13:39.03:0,39,2234
chr10	50169544	.	TCACACACACACACACACACA	T	3196.15	PASS	AB=0.912;AC=32;AF=0.571;AN=56;BaseQRankSum=-1.422;DP=465;FS=5.483;HRun=0;HaplotypeScore=186.9549;InbreedingCoeff=0.6221;MQ=68.63;MQ0=9;MQRankSum=0.515;QD=11.41;ReadPosRankSum=2.178;VQSLOD=2.1944;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:25:48.60:614,49,0	1/1:3,0:3:8.93:72,9,0	0/0:30,0:22:20.67:0,21,151	0/0:40,0:25:39.25:0,39,325	0/0:11,0:11:17.97:0,18,518	1/1:12,0:12:23.06:375,23,0	1/1:21,0:20:21.04:380,21,0	1/1:15,0:14:15.03:163,15,0	1/1:6,0:6:6:53,6,0	0/0:16,0:16:29.75:0,30,853	0/0:11,0:11:12.50:0,12,414	0/1:10,0:9:13.05:305,0,13	1/1:9,0:9:16.52:171,17,0	0/0:11,0:11:20.97:0,21,824	1/1:21,0:21:15:200,15,0	1/1:13,0:13:6:53,6,0	0/0:22,0:22:51.11:0,51,1785	0/0:14,0:13:32.93:0,33,1161	1/1:9,0:7:8.75:70,9,0	1/1:9,0:8:5.86:41,6,0	0/1:34,0:33:5.03:143,0,5	1/1:11,0:11:20.99:232,21,0	1/1:26,0:26:7.70:129,8,0	1/1:8,27:34:3.01:161,3,0	0/0:13,0:13:20.02:0,20,324	0/0:17,0:17:34.63:0,35,1191	0/1:13,1:13:99:193,0,124	0/1:3,0:5:48.16:48,0,377
chr10	50169567	.	CACACACACACACACACAA	C	1766.14	PASS	AB=1.000;AC=27;AF=0.500;AN=54;BaseQRankSum=4.157;DP=522;FS=11.906;HRun=0;HaplotypeScore=191.2562;InbreedingCoeff=0.0293;MQ=53.68;MQ0=27;MQRankSum=2.569;QD=4.79;ReadPosRankSum=0.211;VQSLOD=1.8750;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:34,0:29:43.88:452,44,0	1/1:6,0:6:3.15:18,3,0	./.	0/1:23,0:12:0:0,0,0	0/0:15,0:15:20.02:0,20,686	1/1:19,0:18:32.83:247,33,0	0/1:24,0:23:10.57:141,0,11	0/1:13,0:12:26.24:26,0,27	0/1:10,0:9:6.68:37,0,7	0/0:14,0:13:19.60:0,20,616	0/1:11,0:11:9.59:10,0,308	0/1:15,0:14:61.59:132,0,62	0/1:13,0:12:44.58:71,0,45	0/0:13,0:12:22.51:0,23,926	1/1:5,19:24:2.82:128,3,0	1/1:20,0:19:6.02:83,6,0	0/0:28,0:28:30.82:0,31,2005	0/0:22,0:21:32.37:0,32,979	1/1:12,0:9:10.76:160,11,0	1/1:9,0:7:4.21:45,4,0	0/1:36,0:32:26.25:33,0,26	0/1:13,0:13:34.90:35,0,41	0/0:6,19:24:0.47:0,0,1	0/1:36,0:34:19.88:147,0,20	0/1:17,0:17:28.94:29,0,713	0/0:28,0:26:39.66:0,40,1393	0/1:25,0:23:99:137,0,136	0/1:8,0:9:1.04:1,0,410
chr10	50169583	.	CAA	C	1930.10	PASS	AB=0.938;AC=32;AF=0.615;AN=52;BaseQRankSum=5.234;DP=526;FS=3.459;HRun=3;HaplotypeScore=95.6424;InbreedingCoeff=-0.3543;MQ=52.14;MQ0=30;MQRankSum=3.378;QD=3.94;ReadPosRankSum=1.096;VQSLOD=-0.3475;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:37,0:33:54.69:487,55,0	1/1:5,0:5:8.55:66,9,0	./.	./.	0/1:16,0:16:24.03:24,0,63	1/1:21,0:20:42.34:329,42,0	0/1:24,0:24:25.48:186,0,25	0/1:11,8:17:73.90:74,0,80	1/1:3,7:9:4.96:24,5,0	0/1:16,0:14:3.84:4,0,190	0/1:13,0:13:32.24:32,0,85	0/1:17,0:16:56.24:93,0,56	0/1:12,0:11:32.88:70,0,33	0/1:14,0:13:10.91:11,0,156	1/1:22,0:22:2.66:17,3,0	1/1:1,19:19:5.89:37,6,0	0/1:27,0:27:99:195,0,110	0/1:25,0:24:7.02:7,0,196	0/1:14,0:11:20.39:119,0,20	1/1:2,9:9:11.50:68,11,0	0/1:13,30:38:7.83:8,0,25	0/1:9,0:9:34.90:35,0,42	0/1:20,0:19:0.08:0,0,0	0/1:46,0:44:65.76:66,0,96	0/1:15,0:15:23.65:94,0,24	0/0:29,0:27:30.41:0,30,345	0/1:8,17:23:18.04:33,0,18	0/1:8,0:9:1.64:2,0,95
chr10	50169585	.	AAC	A	472.44	PASS	AB=0.907;AC=18;AF=0.321;AN=56;BaseQRankSum=-0.101;DP=525;FS=10.203;HRun=0;HaplotypeScore=103.1630;InbreedingCoeff=0.2012;MQ=52.17;MQ0=28;MQRankSum=0.465;QD=1.91;ReadPosRankSum=0.495;VQSLOD=1.2401;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:33:13.74:0,14,55	1/1:5,0:5:0.30:1,0,0	0/0:2,0:1:2.84:0,3,14	0/0:7,0:1:2.98:0,3,22	0/0:14,0:14:17.34:0,17,166	0/0:21,0:20:4.48:0,4,11	0/0:24,0:24:17.86:0,18,142	0/0:21,0:19:21.26:0,21,136	0/0:10,0:9:2.69:0,3,7	0/1:16,0:14:10.83:11,0,190	0/1:13,0:13:3.94:4,0,82	0/0:17,0:16:11.85:0,12,148	0/1:10,2:11:0.48:0,0,111	0/0:15,0:14:20.96:0,21,267	1/1:21,0:21:1.36:2,1,0	0/0:20,0:19:4.19:0,4,13	1/1:26,0:26:38.79:351,39,0	0/1:12,12:23:17.06:17,0,85	0/0:14,0:11:10.79:0,11,54	1/1:11,0:9:1.54:17,2,0	0/0:42,0:37:8.04:0,8,68	0/1:7,3:10:31.66:32,0,101	0/1:20,0:19:0.08:0,0,0	0/1:49,0:47:27.89:28,0,238	1/1:15,0:15:15.08:147,15,0	0/0:27,0:25:28.40:0,28,418	0/1:24,1:23:5.96:6,0,68	0/0:9,0:9:2.81:0,3,130
chr10	50171593	.	TCC	T	2947.11	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=2.529;DP=426;FS=4.453;HRun=11;HaplotypeScore=53.9467;InbreedingCoeff=0.7843;MQ=76.61;MQ0=1;MQRankSum=0.714;QD=21.67;ReadPosRankSum=5.763;VQSLOD=2.7132;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:24:29.50:0,30,321	1/1:2,4:6:6.01:64,6,0	0/0:10,0:10:9.03:0,9,129	0/0:11,0:12:6.90:0,7,78	0/0:10,0:13:22.52:0,23,230	1/1:2,18:21:39.04:470,39,0	1/1:3,24:28:59.74:702,60,0	0/0:16,0:16:6.70:0,7,81	1/1:2,20:23:47.82:491,48,0	0/0:18,0:18:34.31:0,34,405	0/0:9,0:9:24.06:0,24,327	0/0:7,0:7:9.02:0,9,113	0/0:12,0:12:17.82:0,18,199	0/0:16,0:16:30.07:0,30,416	1/1:3,26:30:63.12:670,63,0	1/1:2,26:27:63.10:726,63,0	0/0:22,0:26:62.12:0,62,807	0/0:6,0:7:14.54:0,15,191	0/0:9,0:14:24.04:0,24,270	0/0:6,0:6:3.01:0,3,45	0/0:13,0:20:3.48:0,3,48	0/0:3,0:4:3.48:0,3,29	0/0:1,0:1:0:0,0,0	0/0:7,0:12:6.49:0,6,69	0/0:17,0:17:27.07:0,27,365	0/0:16,0:16:24.04:0,24,287	0/0:12,0:17:20.93:0,21,201	0/0:12,0:13:20.54:0,21,261
chr10	50172216	.	CT	C	479.07	PASS	AB=0.934;AC=19;AF=0.339;AN=56;BaseQRankSum=3.735;DP=452;FS=1.134;HRun=2;HaplotypeScore=131.4111;InbreedingCoeff=-0.1996;MQ=32.44;MQ0=30;MQRankSum=0.902;QD=1.68;ReadPosRankSum=1.197;VQSLOD=-0.6167;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:9,6:9:1.70:0,2,68	0/1:7,1:7:12.45:12,0,192	1/1:16,0:1:2.99:24,3,0	0/1:24,0:2:3.01:3,0,34	0/1:22,0:19:19.84:20,0,246	0/1:14,2:15:23.44:23,0,182	0/0:16,1:15:23.14:0,23,147	0/1:40,0:36:99:160,0,727	0/1:12,0:12:57.83:58,0,114	0/1:19,1:18:23.56:24,0,346	0/0:8,0:12:8.68:0,9,81	0/1:13,1:14:19.84:20,0,172	0/1:16,0:16:32.44:32,0,147	0/0:13,1:14:3.28:0,3,203	0/1:13,5:16:63.46:63,0,85	0/0:14,1:14:4.34:0,4,230	0/0:11,0:11:15.55:0,16,218	0/0:8,0:8:8.03:0,8,68	0/0:14,0:13:20.24:0,20,374	0/1:21,5:23:2.77:3,0,152	1/1:2,4:3:3.01:38,3,0	0/1:16,3:18:71.58:124,0,72	0/0:9,3:12:4.60:0,5,24	1/1:8,5:11:2.17:8,2,0	0/0:19,0:18:33.66:0,34,434	0/1:16,0:15:17.25:17,0,339	0/0:14,0:14:17.42:0,17,215	0/0:11,0:10:6.71:0,7,281
chr10	50172217	.	T	TC	459.04	PASS	AB=0.922;AC=17;AF=0.304;AN=56;BaseQRankSum=3.689;DP=437;FS=2.707;HRun=1;HaplotypeScore=134.4965;InbreedingCoeff=-0.1345;MQ=32.39;MQ0=30;MQRankSum=-1.005;QD=1.97;ReadPosRankSum=0.783;VQSLOD=-0.6745;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:9:4.24:0,4,75	0/1:9,0:8:12.47:12,0,181	1/1:16,0:1:2.99:24,3,0	0/0:20,0:1:3.01:0,3,40	0/0:20,0:17:5.31:0,5,242	0/0:15,0:14:9.41:0,9,157	0/0:18,0:16:18.94:0,19,141	0/1:34,6:37:99:194,0,714	0/1:10,2:12:69.34:69,0,119	0/1:17,0:15:4.49:4,0,353	0/0:11,0:11:0.13:0,0,70	0/1:14,0:14:12.55:13,0,162	0/1:9,6:16:37.59:38,0,137	0/0:14,0:14:17.17:0,17,213	0/1:18,0:16:38.35:38,0,86	0/1:12,3:14:19.29:19,0,212	0/0:11,0:11:12.58:0,13,177	0/0:8,0:8:4.54:0,5,45	0/0:13,0:13:23.76:0,24,363	0/1:23,0:20:20.47:20,0,142	1/1:6,0:3:3.01:39,3,0	0/1:17,2:18:68.42:124,0,68	0/0:15,0:11:4.59:0,5,24	1/1:9,3:10:1.30:4,1,0	0/0:19,0:18:32.70:0,33,383	0/1:15,0:14:5.08:5,0,318	0/0:8,5:14:17.52:0,18,197	0/0:11,0:10:17.25:0,17,262
chr10	50172227	.	CT	C	1162.75	PASS	AB=0.860;AC=21;AF=0.375;AN=56;BaseQRankSum=7.466;DP=370;FS=9.068;HRun=1;HaplotypeScore=115.6951;InbreedingCoeff=-0.6382;MQ=30.42;MQ0=25;MQRankSum=-3.000;QD=3.88;ReadPosRankSum=2.395;VQSLOD=0.0328;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:11,3:9:41.08:41,0,173	0/1:7,0:7:57.66:58,0,140	0/0:11,0:1:3.01:0,3,48	0/0:16,0:1:3.01:0,3,48	0/1:10,8:16:99:268,0,112	0/1:9,3:16:99:105,0,236	0/1:10,1:16:12.19:12,0,318	0/1:19,5:26:99:135,0,493	0/0:10,0:11:25.35:0,25,302	0/1:10,2:12:52.28:52,0,292	0/0:9,1:11:0.39:0,0,47	0/0:12,0:12:2.14:0,2,341	0/1:11,1:13:33.06:33,0,134	0/1:8,3:12:51.36:51,0,176	0/1:8,5:14:99:120,0,133	0/1:10,2:13:43.48:43,0,365	0/1:8,1:9:12.93:13,0,284	0/0:4,0:4:6.02:0,6,95	0/1:7,1:9:14.02:14,0,206	0/1:14,5:17:82.13:82,0,171	0/0:5,0:2:2.22:0,2,7	0/1:10,4:14:24.61:25,0,132	0/1:10,0:6:0:0,0,0	0/1:10,1:9:19.53:20,0,31	0/1:14,2:16:29.68:30,0,405	0/1:9,4:14:99:127,0,316	0/1:9,2:11:18.75:19,0,129	0/1:6,2:8:58.33:58,0,263
chr10	50172540	.	TGC	T	2436.75	PASS	AB=1.000;AC=33;AF=0.589;AN=56;BaseQRankSum=3.609;DP=416;FS=30.994;HRun=0;HaplotypeScore=76.8984;InbreedingCoeff=0.8712;MQ=48.09;MQ0=15;MQRankSum=0.910;QD=10.55;ReadPosRankSum=0.387;VQSLOD=1.6457;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:23:35.79:273,36,0	1/1:9,0:9:23.33:159,23,0	0/0:19,0:11:29.87:0,30,260	0/0:19,0:11:25.79:0,26,246	0/0:14,0:13:8.52:0,9,41	1/1:15,0:15:23.59:150,24,0	1/1:13,0:13:28.99:223,29,0	1/1:2,20:22:51.90:443,52,0	1/1:19,0:19:27.94:208,28,0	0/0:17,0:15:33.55:0,34,336	0/0:9,0:7:8.62:0,9,46	1/1:7,0:7:11.94:95,12,0	0/1:12,0:12:0:0,0,0	0/0:15,0:15:4.86:0,5,49	1/1:21,0:20:20.26:133,20,0	1/1:15,0:15:39.04:272,39,0	0/0:19,0:19:34.06:0,34,298	0/0:12,0:12:18.86:0,19,170	1/1:11,0:11:26.97:233,27,0	1/1:6,3:9:8.91:61,9,0	1/1:12,0:10:11.96:95,12,0	1/1:6,0:6:2.96:19,3,0	1/1:8,0:8:8.88:58,9,0	1/1:9,0:6:5.96:44,6,0	0/0:20,0:19:43.54:0,44,249	0/0:25,0:24:63.92:0,64,457	1/1:19,0:19:23.88:183,24,0	0/0:16,0:12:32.48:0,32,208
chr10	50172541	.	GCGCTCTCTCTCT	G	1815.83	PASS	AB=1.000;AC=25;AF=0.446;AN=56;BaseQRankSum=-0.003;DP=416;FS=34.397;HRun=0;HaplotypeScore=134.8239;InbreedingCoeff=0.3939;MQ=47.94;MQ0=18;MQRankSum=2.157;QD=8.25;ReadPosRankSum=-1.694;VQSLOD=0.6406;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:23:42.97:218,0,43	0/1:9,0:9:73.83:133,0,74	0/0:19,0:11:29.87:0,30,260	0/0:19,0:11:25.64:0,26,245	0/0:14,0:13:8.69:0,9,118	1/1:14,0:14:2.69:112,3,0	0/1:13,0:13:96.82:97,0,294	1/1:23,0:23:48.19:435,48,0	0/1:19,0:19:70.96:71,0,559	0/0:16,0:14:40:0,40,973	0/0:9,0:7:8.62:0,9,46	1/1:7,0:7:11.94:95,12,0	0/0:1,11:12:2.99:0,3,23	0/0:15,0:15:12.01:0,12,230	0/1:21,0:20:75.34:75,0,406	0/1:15,0:15:99:126,0,272	0/0:19,0:19:41.31:0,41,638	0/0:13,0:12:26.94:0,27,659	1/1:11,0:11:26.97:233,27,0	1/1:8,0:8:8.91:61,9,0	1/1:12,0:10:11.96:95,12,0	1/1:6,0:6:2.96:19,3,0	1/1:8,0:8:8.88:58,9,0	1/1:11,0:6:5.96:44,6,0	0/0:19,0:18:46.97:0,47,663	0/0:25,0:24:68.46:0,68,1204	0/1:19,0:19:0.09:135,0,0	0/0:16,0:12:32.48:0,32,208
chr10	50172589	.	TCACACACACACACACACA	T	330.27	PASS	AB=0.964;AC=9;AF=0.180;AN=50;BaseQRankSum=4.713;DP=636;FS=19.503;HRun=0;HaplotypeScore=221.5314;InbreedingCoeff=0.1601;MQ=30.61;MQ0=59;MQRankSum=-2.014;QD=1.75;ReadPosRankSum=-0.862;VQSLOD=0.7122;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:37,2:30:91.57:92,0,133	./.	./.	./.	0/0:23,0:22:3.01:0,3,225	1/1:25,1:24:2.09:4,2,0	0/1:27,2:26:99:160,0,158	0/0:39,0:35:36.92:0,37,1038	1/1:22,0:22:0.21:1,0,0	0/0:32,0:27:42:0,42,1288	0/0:18,0:17:18.06:0,18,1307	0/1:27,0:27:15.86:16,0,540	0/0:23,0:21:9.88:0,10,186	0/0:27,0:27:12.51:0,13,707	0/0:34,1:31:3.53:0,4,166	0/1:26,2:25:99:165,0,325	0/0:27,0:24:12.50:0,12,744	0/0:19,0:15:20.98:0,21,614	0/0:10,0:9:20.18:0,20,651	0/0:11,0:11:0.47:0,0,1	0/1:17,0:14:0:0,0,0	0/0:26,0:27:11.97:0,12,440	0/0:14,0:11:8.48:0,8,372	0/0:38,0:30:15.17:0,15,557	0/0:24,0:21:15.05:0,15,1142	0/0:30,0:26:42.11:0,42,1084	0/0:28,0:26:27.31:0,27,734	0/0:14,0:10:27.09:0,27,1267
chr10	50172948	.	AACACACAC	A	2536.41	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=5.167;DP=694;FS=0.619;HRun=0;HaplotypeScore=200.5014;InbreedingCoeff=0.8388;MQ=61.33;MQ0=6;MQRankSum=-6.399;QD=18.79;ReadPosRankSum=0.372;VQSLOD=2.9115;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:39:29.89:0,30,629	0/0:10,0:10:6.02:0,6,176	0/0:37,0:27:31.66:0,32,997	0/0:36,0:30:24.08:0,24,785	0/0:19,0:20:36.12:0,36,1432	0/1:23,0:21:1.16:1,0,208	0/0:31,0:31:23.55:0,24,592	1/1:21,2:23:14.08:298,14,0	0/0:30,0:29:21.05:0,21,488	0/0:28,0:30:69.22:0,69,2316	0/0:10,0:11:18.06:0,18,636	0/0:36,0:40:17.37:0,17,471	0/0:33,0:39:32.06:0,32,651	0/0:13,0:17:30.10:0,30,1113	0/0:19,0:24:12.04:0,12,295	0/0:36,0:37:31.88:0,32,753	0/0:24,0:25:57.18:0,57,2121	0/0:20,0:22:57.18:0,57,1947	1/1:10,8:19:27.07:578,27,0	1/1:7,4:10:15.05:383,15,0	1/1:18,21:39:38.96:721,39,0	0/0:23,0:28:11.55:0,12,389	0/0:7,0:11:2.52:0,3,103	0/0:22,0:30:16.86:0,17,440	0/0:20,0:20:33.10:0,33,1208	0/0:12,0:12:27.09:0,27,905	1/1:11,8:19:33:726,33,0	0/0:5,0:5:12.04:0,12,498
chr10	50174375	.	GT	G	24608.54	PASS	AB=0.771;AC=54;AF=0.964;AN=56;BaseQRankSum=-5.132;DP=725;FS=0.000;HRun=2;HaplotypeScore=83.0969;InbreedingCoeff=-0.0371;MQ=72.48;MQ0=2;MQRankSum=-4.167;QD=33.94;ReadPosRankSum=4.293;VQSLOD=5.0318;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,40:40:99:1480,114,0	1/1:0,11:11:30.10:389,30,0	0/1:10,6:15:93.40:118,0,93	0/1:16,4:19:39.05:83,0,39	1/1:1,29:30:78.12:988,78,0	1/1:1,25:26:63.20:818,63,0	1/1:0,33:33:93.30:1207,93,0	1/1:0,28:28:84.27:1090,84,0	1/1:0,38:38:99:1362,105,0	1/1:0,34:34:99:1267,99,0	1/1:1,16:17:33.11:429,33,0	1/1:0,30:30:84.27:1091,84,0	1/1:0,22:22:66.21:857,66,0	1/1:0,32:32:83.81:1090,84,0	1/1:0,30:30:78.25:1012,78,0	1/1:0,28:28:81.26:1051,81,0	1/1:0,19:19:54.18:701,54,0	1/1:0,24:24:63.20:818,63,0	1/1:1,20:21:60.19:779,60,0	1/1:0,22:22:66.21:857,66,0	1/1:0,52:52:99:1831,141,0	1/1:0,16:16:45.15:584,45,0	1/1:0,22:22:60.19:775,60,0	1/1:1,36:37:93.30:1207,93,0	1/1:3,16:19:45.15:584,45,0	1/1:1,24:25:72.23:935,72,0	1/1:0,23:23:69.22:895,69,0	1/1:0,8:8:24.08:312,24,0
chr10	50177199	.	GT	G	2665.92	PASS	AB=0.904;AC=19;AF=0.339;AN=56;BaseQRankSum=2.074;DP=639;FS=2.112;HRun=13;HaplotypeScore=82.4675;InbreedingCoeff=0.8345;MQ=69.40;MQ0=1;MQRankSum=-0.085;QD=11.25;ReadPosRankSum=4.108;VQSLOD=3.6912;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,26:31:71.56:525,72,0	1/1:1,7:8:17.89:131,18,0	0/0:23,0:22:9.84:0,10,200	0/0:15,0:12:23.49:0,23,179	0/0:31,2:34:40.01:0,40,670	0/0:16,0:16:42:0,42,389	0/0:27,0:28:62.89:0,63,586	0/0:12,0:29:60.28:0,60,334	0/0:24,1:25:41.11:0,41,538	0/0:32,0:32:63.05:0,63,597	0/0:18,0:18:48.01:0,48,449	1/1:5,21:27:58.67:422,59,0	1/1:3,17:21:40.74:286,41,0	0/0:23,0:23:48.06:0,48,458	1/1:6,18:24:29.50:348,30,0	0/0:17,0:17:36:0,36,336	0/0:28,0:28:75.06:0,75,710	0/1:17,1:18:0.74:1,0,274	0/0:10,0:21:43.27:0,43,248	0/0:8,0:21:33.50:0,34,172	0/0:8,0:20:23.19:0,23,114	1/1:1,22:24:55.66:400,56,0	1/1:5,23:29:52:464,52,0	1/1:4,15:19:38.73:284,39,0	0/0:27,1:29:41.14:0,41,541	0/1:22,4:28:5.76:6,0,400	0/0:6,0:22:28.67:0,29,152	0/1:6,1:8:1.12:1,0,127
chr10	50178605	.	T	TG	1298.62	PASS	AB=0.545;AC=11;AF=0.196;AN=56;BaseQRankSum=-6.289;DP=376;FS=2.055;HRun=8;HaplotypeScore=47.1566;InbreedingCoeff=0.7779;MQ=65.51;MQ0=0;MQRankSum=-3.045;QD=20.61;ReadPosRankSum=1.213;VQSLOD=3.4257;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,1:26:28.40:0,28,509	1/1:0,1:1:3.01:35,3,0	0/0:14,0:14:30.01:0,30,274	0/0:12,0:11:14.83:0,15,207	0/0:11,0:11:24.01:0,24,219	0/1:1,5:6:15.41:92,0,15	1/1:4,12:16:36.99:418,37,0	0/0:16,0:16:29.99:0,30,274	1/1:3,11:14:24.07:275,24,0	0/0:8,0:8:18.01:0,18,165	0/0:4,0:4:2.99:0,3,27	0/0:17,0:17:15.88:0,16,328	0/0:9,0:9:24.01:0,24,219	0/0:12,0:13:38.06:0,38,335	1/1:4,8:12:27.07:303,27,0	1/1:3,11:14:30.09:346,30,0	0/0:28,0:28:65.99:0,66,597	0/0:12,0:12:30.01:0,30,275	0/0:14,0:14:36.01:0,36,329	0/0:6,0:6:11.04:0,11,88	0/0:34,0:34:68.57:0,69,605	0/0:9,0:9:21.01:0,21,192	0/0:7,0:7:11.98:0,12,105	0/0:35,0:35:57.26:0,57,665	0/0:12,0:12:29.99:0,30,269	0/0:6,0:6:15:0,15,134	0/0:16,0:16:35.96:0,36,320	0/0:3,0:3:9:0,9,82
chr10	50178645	.	TGG	T	2808.81	PASS	AB=0.971;AC=14;AF=0.250;AN=56;BaseQRankSum=6.831;DP=380;FS=0.481;HRun=10;HaplotypeScore=63.5086;InbreedingCoeff=0.7181;MQ=72.08;MQ0=0;MQRankSum=2.697;QD=20.35;ReadPosRankSum=5.898;VQSLOD=2.1997;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,19:23:45.11:501,45,0	0/0:2,0:2:3.01:0,3,48	0/1:15,0:13:6.64:7,0,103	0/1:6,0:6:19.20:19,0,44	0/0:6,0:6:6.02:0,6,95	0/0:5,0:5:12.04:0,12,190	0/0:17,0:18:50.96:0,51,647	0/0:14,0:14:18.05:0,18,265	0/0:17,0:17:41.45:0,41,435	0/0:8,0:8:14.54:0,15,199	0/0:6,0:6:6.49:0,6,96	1/1:2,23:25:63.17:698,63,0	1/1:0,9:9:27.07:301,27,0	0/0:22,0:23:53.62:0,54,709	0/0:16,0:16:42.08:0,42,540	0/0:15,0:17:38.02:0,38,448	0/0:20,0:21:50.56:0,51,653	0/0:15,0:15:39.03:0,39,419	0/0:9,0:10:29.03:0,29,351	0/0:3,0:3:8.50:0,9,82	0/0:22,0:25:46.96:0,47,615	1/1:2,6:8:15.03:167,15,0	1/1:3,3:6:12.03:132,12,0	1/1:4,41:45:99:1170,105,0	0/0:13,0:13:20.93:0,21,313	0/0:6,0:6:9.03:0,9,143	0/0:14,0:14:32.99:0,33,337	0/0:3,0:3:8.99:0,9,94
chr10	50178834	.	GACAACAACAACA	G	12267.63	PASS	AB=0.590;AC=21;AF=0.375;AN=56;BaseQRankSum=13.000;DP=723;FS=22.834;HRun=0;HaplotypeScore=236.9091;InbreedingCoeff=0.9178;MQ=66.02;MQ0=0;MQRankSum=-15.283;QD=44.94;ReadPosRankSum=3.296;VQSLOD=3.1700;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:45:60.17:0,60,1658	1/1:1,5:6:12.04:334,12,0	0/0:25,0:24:33.04:0,33,613	0/0:34,0:30:54.17:0,54,2140	0/0:19,0:21:51.17:0,51,2634	1/1:2,14:16:27.09:880,27,0	0/1:11,25:36:13.96:908,0,14	0/0:30,0:30:52.06:0,52,2187	1/1:3,23:26:51.17:1802,51,0	0/0:22,0:24:63.22:0,63,3184	0/0:17,0:17:36.12:0,36,1756	1/1:10,29:39:56.74:1955,57,0	1/1:5,17:22:36.12:1272,36,0	0/0:39,0:39:87.30:0,87,4555	1/1:5,29:34:60.21:2050,60,0	1/1:6,17:24:26.81:873,27,0	0/0:33,0:36:90.30:0,90,4495	0/0:21,0:21:51.18:0,51,2659	0/0:16,0:16:27.08:0,27,1014	0/0:14,0:14:42.13:0,42,2013	0/0:46,0:45:99:0,102,5469	1/1:3,13:16:17.29:552,17,0	1/1:3,9:12:15.05:530,15,0	1/1:11,31:42:33.11:1113,33,0	0/0:18,0:18:37.94:0,38,1541	0/0:25,0:24:63.22:0,63,3415	0/0:26,0:27:51.18:0,51,2564	0/0:11,0:11:30.10:0,30,1749
chr10	50185662	.	AGAGGAGGAGGAG	A	5545.36	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=6.204;DP=666;FS=2.808;HRun=0;HaplotypeScore=237.2818;InbreedingCoeff=0.4919;MQ=67.68;MQ0=9;MQRankSum=-8.414;QD=22.91;ReadPosRankSum=2.198;VQSLOD=4.0257;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:22:6.02:0,6,211	0/0:13,0:13:16.87:0,17,424	0/0:34,0:23:26.43:0,26,956	0/0:32,0:27:33.23:0,33,1050	0/0:12,0:11:24.05:0,24,956	0/0:22,0:22:28.33:0,28,772	0/0:36,0:35:0.14:0,0,332	0/1:30,0:30:22.28:22,0,347	0/0:15,0:15:28.23:0,28,566	0/0:33,0:33:93.72:0,94,4452	0/0:14,0:14:36.12:0,36,1715	1/1:11,24:33:54.19:1918,54,0	1/1:4,13:16:36.12:1189,36,0	0/0:24,0:24:57.20:0,57,3043	0/0:34,0:34:41.23:0,41,915	0/0:24,0:21:17.72:0,18,742	0/0:29,0:29:68.81:0,69,3552	0/0:26,0:26:69.24:0,69,3348	0/1:18,0:17:27.02:27,0,191	0/1:15,0:15:99:146,0,126	0/1:31,0:31:99:185,0,191	1/1:5,17:22:27.01:781,27,0	1/1:3,18:21:24.55:678,25,0	1/1:6,22:28:21.07:556,21,0	0/0:14,0:13:42.12:0,42,2013	0/0:22,0:21:57.20:0,57,2344	0/1:25,0:25:41.56:42,0,478	0/0:17,0:17:48.15:0,48,2498
chr10	50185674	.	G	GGAAGAGGAGGAGGAA	11394.07	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=5.132;DP=664;FS=0.355;HRun=0;HaplotypeScore=259.3833;InbreedingCoeff=0.6186;MQ=51.45;MQ0=18;MQRankSum=-9.824;QD=27.86;ReadPosRankSum=-0.706;VQSLOD=3.6585;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:3,23:32:6.02:389,6,0	1/1:11,0:11:21:524,21,0	0/0:26,0:14:22.27:0,22,527	0/0:24,0:17:38.93:0,39,515	0/0:13,0:12:27.02:0,27,563	1/1:21,0:20:9.32:980,9,0	1/1:39,0:38:28.44:754,28,0	1/1:32,0:30:69.52:840,70,0	1/1:15,0:14:18.90:929,19,0	0/0:36,0:36:99:0,105,2737	0/0:16,0:16:42.08:0,42,1118	0/1:29,0:27:99:188,0,663	0/1:14,0:13:64.67:65,0,614	0/0:20,0:19:57.14:0,57,1788	1/1:35,0:34:36.56:1244,37,0	1/1:24,0:21:32.37:865,32,0	0/0:31,0:31:59.40:0,59,2201	0/0:27,0:27:42.43:0,42,1662	1/1:20,0:18:46.80:784,47,0	1/1:14,0:16:45.06:1154,45,0	1/1:29,0:29:51.04:995,51,0	0/1:19,0:19:57.65:58,0,195	0/1:19,0:19:59.77:60,0,127	0/1:26,0:26:94.28:94,0,267	0/0:17,0:16:51.09:0,51,1354	0/0:28,0:25:69.10:0,69,1438	1/1:23,0:25:55.08:1471,55,0	0/0:17,0:16:48.10:0,48,1264
chr10	50185676	.	AGG	A	572.28	PASS	AB=0.980;AC=10;AF=0.179;AN=56;BaseQRankSum=9.511;DP=640;FS=7.676;HRun=2;HaplotypeScore=147.9900;InbreedingCoeff=0.2240;MQ=51.02;MQ0=19;MQRankSum=-7.376;QD=3.49;ReadPosRankSum=3.494;VQSLOD=-0.6751;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:27:9.01:0,9,108	0/0:11,0:11:22.42:0,22,222	0/0:25,0:13:18.22:0,18,401	0/0:22,0:16:44.51:0,45,638	0/0:12,0:11:33.07:0,33,495	0/0:20,0:19:19.94:0,20,333	0/0:39,0:38:5.61:0,6,274	0/0:31,0:29:13.08:0,13,360	0/0:15,0:14:29.34:0,29,277	0/0:36,0:36:99:0,105,1859	0/0:15,0:15:45.15:0,45,777	1/1:26,1:25:50.54:246,51,0	1/1:14,0:13:33.24:161,33,0	0/0:20,0:19:57.19:0,57,1103	0/0:35,0:34:30.54:0,31,441	0/0:22,0:19:30.49:0,30,373	0/0:30,0:30:89.64:0,90,1588	0/0:26,0:26:78.26:0,78,1440	0/1:20,0:18:23.20:23,0,203	0/1:13,2:15:68.98:69,0,96	0/1:27,0:26:39.70:40,0,143	0/1:17,0:17:12.83:109,0,13	0/1:19,0:19:29.94:46,0,30	0/1:25,0:25:32.84:33,0,76	0/0:17,0:16:51.17:0,51,960	0/0:28,0:25:72.24:0,72,1210	0/0:23,2:25:0.52:0,1,188	0/0:17,0:16:48.15:0,48,909
chr10	50185677	.	G	GAGGAGGAAGAA	4579.76	PASS	AB=0.993;AC=15;AF=0.268;AN=56;BaseQRankSum=7.978;DP=648;FS=5.302;HRun=0;HaplotypeScore=225.8233;InbreedingCoeff=-0.0091;MQ=51.03;MQ0=19;MQRankSum=-8.746;QD=14.22;ReadPosRankSum=2.145;VQSLOD=3.4631;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:27:13.94:178,0,14	0/1:11,0:11:99:101,0,172	0/0:25,0:13:20.94:0,21,578	0/0:22,0:16:42.60:0,43,797	0/0:12,0:11:30.06:0,30,687	0/1:20,0:19:99:344,0,231	0/1:40,0:39:99:151,0,210	0/1:33,0:31:39.87:346,0,40	0/1:15,0:14:99:361,0,137	0/0:35,0:35:99:0,102,3109	0/0:15,0:15:45.14:0,45,1213	0/1:28,0:26:31.56:32,0,514	0/0:15,0:14:32.08:0,32,561	0/0:21,0:20:57.20:0,57,1940	0/1:34,0:33:99:226,0,321	0/1:23,0:20:99:241,0,264	0/0:31,0:31:65.44:0,65,2539	0/0:26,0:26:78.21:0,78,2184	0/1:19,0:18:26.67:296,0,27	1/1:13,2:15:30.91:755,31,0	0/1:27,1:27:15.09:522,0,15	0/0:17,0:17:4.31:0,4,198	0/0:19,0:19:26.65:0,27,278	0/0:25,0:25:19.27:0,19,283	0/0:17,0:16:51.17:0,51,1520	0/0:29,0:26:72.24:0,72,1818	1/1:23,2:25:17.14:1029,17,0	0/0:17,0:16:48.15:0,48,1585
chr10	50185680	.	G	GGAAGAA	1936.39	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=10.056;DP=650;FS=6.881;HRun=0;HaplotypeScore=184.7966;InbreedingCoeff=-0.2009;MQ=49.68;MQ0=20;MQRankSum=-10.006;QD=4.79;ReadPosRankSum=2.561;VQSLOD=2.0354;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:25:31.67:32,0,70	0/1:11,0:11:47.42:47,0,119	0/0:25,0:12:14.27:0,14,353	0/0:18,0:12:30.03:0,30,507	0/0:11,0:10:27.08:0,27,534	0/1:20,0:19:99:179,0,178	0/1:41,0:40:93.15:93,0,213	0/1:33,0:31:65.28:65,0,80	0/1:17,0:16:99:156,0,115	0/0:32,0:32:87.30:0,87,1971	0/0:16,0:16:45.11:0,45,870	0/1:28,0:26:99:210,0,409	0/1:15,0:14:44.18:44,0,336	0/0:23,0:22:60.16:0,60,1295	0/1:34,0:33:99:158,0,232	0/1:25,0:22:99:141,0,190	0/0:31,0:32:59.99:0,60,1766	0/0:28,0:28:81.08:0,81,1589	0/1:20,0:18:30.07:30,0,138	1/1:14,2:16:23.35:295,23,0	0/1:27,0:27:99:211,0,100	0/1:18,0:18:14.92:15,0,293	0/1:19,0:19:25.95:26,0,189	0/1:26,0:26:20.25:20,0,271	0/0:17,0:17:48.16:0,48,1028	0/0:28,0:25:63.20:0,63,1227	1/1:23,2:25:12.55:386,13,0	0/0:16,0:15:45.13:0,45,1022
chr10	50185683	.	GGAGGAAGAA	G	2830.58	PASS	AB=0.972;AC=14;AF=0.250;AN=56;BaseQRankSum=8.617;DP=642;FS=2.533;HRun=0;HaplotypeScore=202.4433;InbreedingCoeff=-0.1980;MQ=50.46;MQ0=20;MQRankSum=-9.311;QD=9.01;ReadPosRankSum=0.331;VQSLOD=2.3902;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:25:15.05:0,15,288	0/0:9,0:9:12.03:0,12,262	0/0:22,0:11:13.61:0,14,399	0/0:19,0:13:17.68:0,18,543	0/0:10,0:9:27.08:0,27,646	0/0:20,0:19:26.11:0,26,388	0/1:41,0:40:85.89:86,0,105	0/1:29,2:29:9.56:371,0,10	0/1:18,0:17:7.92:8,0,257	0/0:32,0:32:93.30:0,93,3716	0/0:14,0:14:39.13:0,39,1307	1/1:28,0:26:1.84:438,2,0	0/1:16,0:15:66.97:258,0,67	0/0:23,0:22:63.21:0,63,2206	0/0:33,0:32:4.65:0,5,508	0/1:25,0:22:24.76:25,0,473	0/0:32,0:32:91.84:0,92,3247	0/0:28,0:28:78.19:0,78,2394	0/1:20,0:18:84.15:277,0,84	0/1:16,0:16:85.16:498,0,85	0/1:28,0:27:99:385,0,117	0/1:19,0:19:99:135,0,112	0/1:22,0:22:99:107,0,133	0/1:27,0:27:93.64:94,0,105	0/0:18,0:18:54.16:0,54,1743	0/0:24,0:21:63.16:0,63,1802	0/1:14,9:23:99:302,0,312	0/0:16,0:15:42.14:0,42,1770
chr10	50185686	.	GGAAGAAGAA	G	1283.25	PASS	AB=0.968;AC=14;AF=0.250;AN=56;BaseQRankSum=9.378;DP=639;FS=5.777;HRun=0;HaplotypeScore=207.5656;InbreedingCoeff=-0.3349;MQ=49.45;MQ0=19;MQRankSum=-9.563;QD=3.64;ReadPosRankSum=2.903;VQSLOD=1.9873;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:23:18.06:0,18,431	0/0:8,0:8:8.99:0,9,209	0/0:18,0:8:17.95:0,18,355	0/0:19,0:11:25.28:0,25,599	0/0:11,0:10:27.09:0,27,719	0/0:19,0:18:9.66:0,10,272	0/1:12,30:41:62.80:190,0,63	0/1:31,0:30:99:128,0,217	0/1:18,0:17:45.02:45,0,127	0/0:33,0:33:93.11:0,93,3854	0/0:14,0:14:42.13:0,42,1407	0/1:30,0:28:99:109,0,196	0/1:16,0:15:60.62:61,0,131	0/0:22,0:21:60.21:0,60,2129	0/1:32,0:31:46.57:47,0,310	0/1:24,0:21:82.58:83,0,303	0/0:31,0:31:91.19:0,91,3404	0/0:28,0:28:69.23:0,69,2379	0/1:19,0:17:99:114,0,211	0/1:17,0:17:99:288,0,241	0/1:29,0:28:99:165,0,399	0/1:19,0:19:8.23:8,0,194	0/1:22,0:22:16.19:16,0,235	0/1:30,0:30:13.51:14,0,358	0/0:19,0:19:51.16:0,51,1779	0/0:23,0:20:57.17:0,57,1919	0/1:23,0:23:99:172,0,484	0/0:15,0:14:42.13:0,42,1707
chr10	50185689	.	A	AGAGGAGGAGGAG	8033.55	PASS	AB=1.000;AC=24;AF=0.429;AN=56;BaseQRankSum=8.337;DP=651;FS=1.732;HRun=0;HaplotypeScore=226.9680;InbreedingCoeff=0.6483;MQ=50.25;MQ0=18;MQRankSum=-11.709;QD=22.57;ReadPosRankSum=1.542;VQSLOD=4.1221;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:24:99:349,0,128	1/1:3,4:7:2.55:213,3,0	0/0:19,0:11:21.83:0,22,390	0/0:18,0:11:18.48:0,18,346	0/0:11,0:10:27.06:0,27,546	1/1:8,10:20:12.28:727,12,0	1/1:41,0:40:6.83:477,7,0	1/1:32,0:30:57.08:595,57,0	1/1:8,7:19:26.17:913,26,0	0/0:35,0:35:96.21:0,96,2753	0/0:15,0:15:45.11:0,45,1039	0/1:30,0:28:34.30:34,0,921	0/0:16,0:15:4.41:0,4,752	0/0:21,0:20:60.17:0,60,1627	1/1:11,13:35:25.71:649,26,0	1/1:13,8:22:15.99:614,16,0	0/0:31,0:31:67.67:0,68,2213	0/0:26,0:26:69.16:0,69,1609	1/1:21,0:19:42.60:588,43,0	1/1:14,0:14:41.84:959,42,0	0/1:29,0:28:25.34:708,0,25	0/0:20,0:20:27.07:0,27,532	0/0:23,0:23:15.18:0,15,323	0/1:30,0:30:8.25:8,0,452	0/0:19,0:19:54.14:0,54,1267	0/0:24,0:21:60.15:0,60,1347	1/1:23,0:23:51.15:1200,51,0	0/0:16,0:15:45.12:0,45,1357
chr10	50185698	.	A	AGGAGGAG	2654.77	PASS	AB=0.948;AC=13;AF=0.232;AN=56;BaseQRankSum=6.028;DP=641;FS=0.479;HRun=0;HaplotypeScore=206.5664;InbreedingCoeff=0.3051;MQ=53.80;MQ0=11;MQRankSum=-6.460;QD=11.80;ReadPosRankSum=-0.409;VQSLOD=2.6884;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:25:35.14:0,35,752	0/1:6,1:7:8.28:118,0,8	0/0:17,0:12:33.05:0,33,576	0/0:18,0:13:26.40:0,26,663	0/0:15,0:14:17.51:0,18,597	1/1:17,1:17:10.72:444,11,0	0/1:44,1:44:19.22:430,0,19	0/1:35,0:33:14.27:14,0,528	1/1:16,2:17:17.86:450,18,0	0/0:34,0:34:99:0,99,2208	0/0:17,0:17:48.03:0,48,989	0/0:29,0:29:65.71:0,66,1435	0/0:20,0:20:51.14:0,51,1074	0/0:20,0:19:54.17:0,54,1170	1/1:22,5:26:2.94:666,3,0	0/1:13,5:17:0.24:556,0,0	0/0:30,0:30:62.97:0,63,2101	0/0:23,0:23:69.20:0,69,1419	0/1:18,0:18:64.54:65,0,354	0/1:17,0:17:30.32:30,0,359	0/0:31,0:30:2.89:0,3,505	0/0:20,0:20:42.10:0,42,1021	0/0:23,0:23:33.56:0,34,754	0/0:26,0:26:38.63:0,39,775	0/0:22,0:22:62.39:0,62,1342	0/0:30,0:27:78.22:0,78,1564	0/1:22,0:22:42.45:42,0,294	0/0:15,0:14:39.13:0,39,945
chr10	50187588	.	AT	A	2263.57	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=4.694;DP=482;FS=6.651;HRun=1;HaplotypeScore=52.0754;InbreedingCoeff=0.9840;MQ=68.52;MQ0=0;MQRankSum=0.837;QD=32.34;ReadPosRankSum=3.320;VQSLOD=2.9785;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:63.14:0,63,845	1/1:0,10:10:24.08:330,24,0	0/0:9,0:9:17.23:0,17,262	0/0:15,0:15:39.03:0,39,461	0/0:26,0:26:74.91:0,75,953	1/1:0,19:19:48.12:637,48,0	1/1:1,5:6:9.33:198,9,0	0/0:30,0:29:84.26:0,84,1150	1/1:0,9:9:21.07:289,21,0	0/0:25,0:25:75.22:0,75,1016	0/0:25,0:25:72.07:0,72,944	0/0:14,0:14:42.14:0,42,598	0/0:13,0:13:39.12:0,39,530	0/0:14,0:14:42.04:0,42,535	1/1:0,9:9:24.08:330,24,0	1/1:0,17:17:48.16:664,48,0	0/0:27,0:27:75.20:0,75,1028	0/0:19,0:19:57.08:0,57,766	0/0:12,0:12:36.12:0,36,507	0/0:18,0:18:54.08:0,54,710	0/0:10,0:10:21.05:0,21,281	0/0:13,0:13:29.98:0,30,377	0/0:20,0:20:60.03:0,60,765	0/0:9,0:9:26.90:0,27,330	0/0:24,0:24:72.20:0,72,999	0/0:28,0:28:80.87:0,81,1027	0/0:23,0:23:69.19:0,69,928	0/0:15,0:15:44.88:0,45,562
chr10	50187719	.	G	GT	123.55	PASS	AB=1.000;AC=17;AF=0.944;AN=18;DP=39;FS=0.000;HRun=1;HaplotypeScore=15.4114;MQ=35.65;MQ0=0;QD=5.88;VQSLOD=0.4053;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	./.	./.	1/1:1,1:2:5.96:43,6,0	./.	./.	0/1:3,0:3:0:0,0,0	./.	1/1:2,1:3:2.97:20,3,0	./.	1/1:1,2:3:5.96:43,6,0	./.	./.	1/1:1,1:2:2.97:20,3,0	./.	./.	./.	1/1:1,1:2:3.44:21,3,0	./.	1/1:1,0:1:2.98:22,3,0	./.	./.	./.	1/1:3,0:3:2.94:18,3,0	1/1:1,1:2:1.82:5,2,0
chr10	50189165	.	A	ATG	341.92	PASS	AB=0.863;AC=3;AF=0.054;AN=56;BaseQRankSum=8.717;DP=1039;FS=41.153;HRun=0;HaplotypeScore=283.1414;InbreedingCoeff=-0.0573;MQ=54.10;MQ0=5;MQRankSum=-5.646;QD=2.08;ReadPosRankSum=-1.942;VQSLOD=1.2727;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:50:99:0,128,2017	0/0:10,0:10:15.86:0,16,225	0/0:35,0:11:21.24:0,21,398	0/0:41,0:23:28.01:0,28,543	0/0:20,0:20:41.92:0,42,661	0/0:18,0:18:33.08:0,33,504	0/0:25,0:26:66.17:0,66,1046	0/0:49,0:45:99:0,117,1808	0/0:24,0:24:59.76:0,60,903	0/1:59,6:66:99:229,0,2033	0/0:16,2:18:39.33:0,39,586	0/0:42,0:42:99:0,99,1473	0/0:38,0:37:77.49:0,77,1427	0/0:45,0:44:99:0,111,1753	0/0:27,0:27:55.12:0,55,811	0/0:27,0:27:69.23:0,69,1091	0/0:42,0:41:99:0,111,1697	0/0:22,0:22:63.21:0,63,994	0/0:30,0:29:83.77:0,84,1281	0/0:36,0:36:72.78:0,73,1130	0/0:127,0:123:99:0,292,4577	0/0:30,0:31:40.60:0,41,579	0/0:22,0:22:39.35:0,39,588	0/0:55,0:55:99:0,125,2178	0/1:29,14:43:77.68:78,0,798	0/1:50,5:55:99:136,0,2011	0/0:21,0:21:54.18:0,54,854	0/0:14,0:13:39.13:0,39,626
chr10	50189183	.	CCACA	C	4386.84	PASS	AB=0.667;AC=11;AF=0.196;AN=56;BaseQRankSum=7.439;DP=1067;FS=3.685;HRun=0;HaplotypeScore=266.4808;InbreedingCoeff=0.8869;MQ=52.31;MQ0=31;MQRankSum=-4.446;QD=31.11;ReadPosRankSum=0.115;VQSLOD=4.5396;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:49:99:0,114,2595	0/1:4,4:8:17.13:38,0,17	0/0:56,0:15:23.62:0,24,354	0/0:55,0:24:41.64:0,42,757	0/0:19,0:19:29.57:0,30,718	1/1:4,15:19:19.33:557,19,0	1/1:13,20:33:71.86:1133,72,0	0/0:60,0:54:99:0,105,2264	1/1:7,18:24:36.99:714,37,0	0/0:54,0:53:99:0,123,2533	0/0:17,0:18:41.90:0,42,823	0/0:35,0:36:93.12:0,93,1986	0/0:38,0:37:84.29:0,84,1949	0/0:39,0:38:78.26:0,78,1751	1/1:5,24:30:42.34:866,42,0	1/1:7,18:25:63.21:1078,63,0	0/0:47,0:45:99:0,109,2529	0/0:22,0:24:61.02:0,61,1438	0/0:23,0:22:38.34:0,38,844	0/0:33,0:32:62.45:0,62,1327	0/0:135,0:135:99:0,272,6410	0/0:31,0:30:35.84:0,36,687	0/0:17,0:17:26.89:0,27,512	0/0:56,0:57:99:0,136,3209	0/0:37,0:39:68.69:0,69,1435	0/0:54,0:54:99:0,129,2808	0/0:14,0:15:35.81:0,36,757	0/0:17,0:17:41.90:0,42,819
chr10	50189447	.	CCACA	C	4485.33	PASS	AB=0.806;AC=21;AF=0.375;AN=56;BaseQRankSum=6.593;DP=735;FS=1.417;HRun=0;HaplotypeScore=157.3399;InbreedingCoeff=0.8555;MQ=52.03;MQ0=28;MQRankSum=-0.763;QD=17.05;ReadPosRankSum=4.451;VQSLOD=4.7672;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:32:5.38:0,5,72	1/1:6,8:14:21.03:326,21,0	0/0:53,0:16:15.05:0,15,241	0/0:52,0:17:12.51:0,13,235	0/0:14,0:13:30.10:0,30,715	1/1:12,1:19:21.03:216,21,0	0/1:19,0:24:17.82:99,0,18	0/0:27,0:26:32.82:0,33,518	1/1:8,0:30:42.05:391,42,0	0/0:27,0:25:42.60:0,43,820	0/0:13,0:11:21.07:0,21,465	1/1:18,10:29:47.40:841,47,0	1/1:6,12:19:27.08:387,27,0	0/0:19,0:19:36.12:0,36,801	1/1:9,0:18:26.08:229,26,0	1/1:9,0:14:0.60:111,1,0	0/0:39,0:40:74.97:0,75,1608	0/0:19,0:19:36.12:0,36,831	0/0:24,0:18:17.54:0,18,281	0/0:8,0:17:14.84:0,15,140	0/0:50,0:50:32.61:0,33,401	1/1:10,13:23:18.97:306,19,0	1/1:12,6:19:23.47:347,23,0	1/1:20,28:49:47.22:1232,47,0	0/0:23,0:24:42.06:0,42,877	0/0:26,0:26:53.92:0,54,1047	0/0:4,0:11:15.05:0,15,240	0/0:9,0:10:20.43:0,20,401
chr10	50191873	.	AG	A	4944.04	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=12.341;DP=638;FS=7.110;HRun=2;HaplotypeScore=62.3012;InbreedingCoeff=0.9685;MQ=75.14;MQ0=0;MQRankSum=-3.304;QD=36.35;ReadPosRankSum=2.380;VQSLOD=5.4019;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,154,2272	1/1:0,7:7:21.07:273,21,0	0/0:11,0:11:15.12:0,15,296	0/0:11,0:12:4.45:0,4,209	0/0:13,0:13:35.48:0,35,497	1/1:0,22:22:63.20:817,63,0	1/1:0,33:33:93.30:1207,93,0	0/0:18,0:18:48.16:0,48,713	1/1:0,24:24:66.21:856,66,0	0/0:28,0:28:81.20:0,81,1147	0/0:15,0:15:45.15:0,45,671	0/0:26,0:26:78.26:0,78,1165	0/0:29,0:29:84.28:0,84,1253	0/0:28,0:28:81.24:0,81,1154	1/1:2,19:21:51.17:662,51,0	1/1:0,29:29:87.28:1129,87,0	0/0:44,0:44:99:0,132,1978	0/0:17,0:17:48.16:0,48,719	0/0:26,0:26:75.25:0,75,1101	0/0:19,0:19:57.19:0,57,854	0/0:25,0:25:75.24:0,75,1104	0/0:13,0:13:39.13:0,39,569	0/0:12,0:12:36.12:0,36,539	0/0:25,0:25:72.24:0,72,1078	0/0:19,0:19:57.19:0,57,854	0/0:29,0:29:84.28:0,84,1259	0/0:23,0:23:69.23:0,69,1034	0/0:17,0:17:51.17:0,51,764
chr10	50193538	.	T	TA	1207.40	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-7.985;DP=599;FS=1.575;HRun=1;HaplotypeScore=59.5109;InbreedingCoeff=0.9820;MQ=64.42;MQ0=1;MQRankSum=0.450;QD=32.63;ReadPosRankSum=0.267;VQSLOD=3.2622;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,34:37:87.29:1302,87,0	0/0:6,0:6:18.03:0,18,217	0/0:21,0:18:52.94:0,53,631	0/0:24,0:23:45.18:0,45,658	0/0:22,0:22:63.19:0,63,803	0/0:14,0:14:42.12:0,42,531	0/0:25,0:25:69.22:0,69,896	0/0:25,0:25:69.21:0,69,872	0/0:33,0:33:93.30:0,93,1207	0/0:15,0:13:42.14:0,42,545	0/0:6,0:6:18.05:0,18,220	0/0:26,0:26:72.23:0,72,922	0/0:18,0:18:48.13:0,48,595	0/0:24,0:24:72.23:0,72,934	0/0:33,0:33:96.29:0,96,1217	0/0:26,0:26:75.24:0,75,973	0/0:23,0:23:66.21:0,66,857	0/0:19,0:19:57.17:0,57,726	0/0:25,0:24:75.24:0,75,963	0/0:15,0:15:42.13:0,42,545	0/0:31,0:31:87.27:0,87,1105	0/0:17,0:17:48.16:0,48,623	0/0:9,0:9:24.08:0,24,311	0/0:31,0:31:93.30:0,93,1206	0/0:14,0:14:42.14:0,42,545	0/0:25,0:25:66.21:0,66,857	0/0:20,0:20:60.19:0,60,773	0/0:15,0:15:39.13:0,39,506
chr10	50194030	.	G	GT	3608.75	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=8.906;DP=322;FS=32.007;HRun=1;HaplotypeScore=44.4288;InbreedingCoeff=0.8701;MQ=51.62;MQ0=11;MQRankSum=2.878;QD=35.73;ReadPosRankSum=7.077;VQSLOD=1.2794;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:10:18.02:0,18,213	0/0:4,0:4:12.04:0,12,155	0/0:2,0:2:2.98:0,3,21	0/0:6,0:5:12.04:0,12,152	0/0:6,0:6:12.04:0,12,155	0/0:10,0:10:18.06:0,18,234	0/0:12,0:11:27.09:0,27,350	0/0:11,0:10:27:0,27,312	0/0:7,0:7:18.06:0,18,233	0/0:15,0:14:42.12:0,42,512	0/0:6,0:6:12.04:0,12,155	1/1:2,19:21:45.62:668,46,0	1/1:0,11:10:30.10:449,30,0	0/0:12,0:12:33.11:0,33,428	0/0:7,0:7:18.06:0,18,234	0/0:5,0:3:6.02:0,6,78	0/0:30,0:27:63.20:0,63,816	0/0:23,0:19:42.14:0,42,545	0/0:6,0:6:12.04:0,12,155	0/0:8,0:8:15.04:0,15,180	0/0:12,0:11:30.06:0,30,359	1/1:1,17:18:45.11:649,45,0	1/1:0,21:21:48.16:719,48,0	1/1:2,28:28:75.25:1124,75,0	0/0:9,0:9:24.06:0,24,297	0/0:9,0:9:18.06:0,18,233	0/0:6,0:6:18.04:0,18,215	0/0:3,0:2:6.02:0,6,78
chr10	50195762	.	GC	G	5360.64	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=11.404;DP=697;FS=2.473;HRun=2;HaplotypeScore=68.7869;InbreedingCoeff=0.9991;MQ=81.57;MQ0=0;MQRankSum=-3.570;QD=37.23;ReadPosRankSum=-1.879;VQSLOD=4.7479;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,111,1643	0/0:10,0:10:27.09:0,27,402	0/0:13,0:13:33.11:0,33,485	0/0:28,0:28:80.74:0,81,1123	0/0:24,0:24:66.21:0,66,970	0/0:25,0:25:75.22:0,75,1083	0/0:36,0:36:99:0,105,1555	1/1:0,33:33:96.30:1231,96,0	0/0:29,0:29:87.29:0,87,1304	0/0:23,0:23:63.17:0,63,901	0/0:11,0:11:33.11:0,33,494	0/0:27,0:27:78.24:0,78,1129	0/0:23,0:23:69.23:0,69,1023	0/0:30,0:30:90.29:0,90,1326	0/0:20,0:20:60.20:0,60,899	0/0:18,0:18:54.18:0,54,808	0/0:38,0:38:99:0,105,1546	0/0:33,0:33:99:0,99,1478	1/1:0,15:15:45.15:585,45,0	1/1:1,14:15:42.14:545,42,0	1/1:0,60:60:99:2259,175,0	0/0:18,0:18:51.17:0,51,761	0/0:14,0:14:42.14:0,42,628	0/0:34,0:34:99:0,99,1482	0/0:19,0:19:57.19:0,57,853	0/0:31,0:31:90.30:0,90,1348	1/1:0,21:21:57.19:740,57,0	0/0:9,0:9:24.08:0,24,358
chr10	50198171	.	A	AG	12026.22	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-8.950;DP=494;FS=8.235;HRun=1;HaplotypeScore=52.9199;InbreedingCoeff=0.9980;MQ=81.89;MQ0=0;MQRankSum=-1.162;QD=39.95;ReadPosRankSum=-0.055;VQSLOD=4.8873;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,29:34:93.24:1337,93,0	1/1:0,17:17:49.97:687,50,0	0/0:18,0:18:48.14:0,48,589	0/0:11,0:11:24.36:0,24,327	0/0:17,0:17:45.11:0,45,551	1/1:0,16:16:45.15:674,45,0	1/1:1,19:20:51.17:762,51,0	1/1:2,15:17:45.13:634,45,0	1/1:0,15:15:33.11:493,33,0	0/0:16,0:16:48.15:0,48,609	0/0:16,0:16:45.14:0,45,568	1/1:1,21:22:63.21:941,63,0	1/1:0,30:30:87.29:1300,87,0	0/0:29,0:29:87.28:0,87,1128	1/1:1,17:18:48.16:719,48,0	1/1:0,15:15:45.15:674,45,0	0/0:26,0:26:78.24:0,78,994	0/0:16,0:16:42.14:0,42,543	1/1:0,18:18:54.02:670,54,0	1/1:0,13:13:39.13:584,39,0	1/1:0,12:12:36.12:539,36,0	1/1:0,8:8:18.06:266,18,0	1/1:1,8:9:24.08:354,24,0	1/1:0,19:19:48.16:719,48,0	0/0:10,0:10:27.08:0,27,338	0/0:18,0:18:51.15:0,51,638	1/1:1,17:18:45.15:674,45,0	0/0:16,0:16:48.13:0,48,593
chr10	50198205	.	T	TA	733.85	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.759;DP=418;FS=5.879;HRun=4;HaplotypeScore=68.6359;InbreedingCoeff=0.9123;MQ=86.72;MQ0=0;MQRankSum=-3.648;QD=28.23;ReadPosRankSum=2.742;VQSLOD=3.3708;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,20:26:63.18:829,63,0	0/0:15,0:15:42.12:0,42,476	0/0:15,0:15:30.45:0,30,321	0/0:14,0:14:36.07:0,36,384	0/0:7,0:7:15.04:0,15,169	0/0:13,0:13:36.09:0,36,398	0/0:29,0:29:72.20:0,72,815	0/0:19,0:19:57.16:0,57,647	0/0:14,0:14:30.08:0,30,340	0/0:10,0:10:30.09:0,30,340	0/0:14,0:14:36.07:0,36,395	0/0:18,0:18:51.13:0,51,569	0/0:21,0:21:51.14:0,51,578	0/0:23,0:23:69.20:0,69,783	0/0:18,0:18:51.14:0,51,577	0/0:14,0:14:42.10:0,42,467	0/0:21,0:21:60.15:0,60,668	0/0:13,0:13:39.11:0,39,442	0/0:15,0:15:42.11:0,42,467	0/0:6,0:6:15.04:0,15,170	0/0:10,0:10:27.08:0,27,306	0/0:8,0:8:24.07:0,24,270	0/0:4,0:4:9.03:0,9,102	0/0:14,0:14:42.12:0,42,476	0/0:10,0:10:27.08:0,27,306	0/0:17,0:17:51.13:0,51,570	0/0:16,0:16:38.87:0,39,431	0/0:14,0:14:39.11:0,39,441
chr10	50198262	.	AC	A	1233.76	PASS	AB=0.916;AC=27;AF=0.482;AN=56;BaseQRankSum=5.203;DP=333;FS=14.235;HRun=12;HaplotypeScore=51.1345;InbreedingCoeff=0.1457;MQ=79.69;MQ0=0;MQRankSum=-0.622;QD=4.92;ReadPosRankSum=1.638;VQSLOD=0.4768;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:5.99:0,6,53	1/1:6,0:7:4.97:29,5,0	0/1:18,0:13:1.43:1,0,22	0/0:13,0:12:7.14:0,7,78	0/0:7,0:7:6.01:0,6,60	1/1:12,1:15:13.07:83,13,0	1/1:20,11:33:53.45:355,53,0	0/1:9,0:9:0:0,0,0	1/1:11,2:13:17.88:137,18,0	1/1:8,0:8:0.85:2,1,0	0/1:7,0:7:11.15:11,0,79	0/0:13,0:13:18:0,18,162	0/1:13,1:14:28.26:28,0,92	0/1:9,0:9:14.07:14,0,44	1/1:13,2:16:28.81:206,29,0	1/1:9,6:17:31.01:199,31,0	0/0:18,1:19:4.69:0,5,181	0/1:18,2:21:99:157,0,109	0/1:11,0:12:0.86:1,0,33	0/0:3,0:3:3:0,3,25	0/0:4,0:5:5.84:0,6,43	0/1:4,1:5:16.87:25,0,17	0/0:5,0:5:5.90:0,6,41	0/1:6,1:7:30.96:34,0,31	0/1:11,3:14:31.54:32,0,56	1/1:12,0:12:5.78:37,6,0	0/0:7,0:6:6.89:0,7,58	0/1:9,5:14:51.69:52,0,61
chr10	50199553	.	GC	G	398.38	PASS	AC=24;AF=0.522;AN=46;BaseQRankSum=5.488;DP=278;FS=0.000;HRun=3;HaplotypeScore=32.3133;InbreedingCoeff=0.6935;MQ=83.17;MQ0=7;MQRankSum=-2.105;QD=14.23;ReadPosRankSum=-6.131;VQSLOD=0.2294;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:0,3:3:6.02:74,6,0	1/1:2,0:2:6.02:74,6,0	0/0:21,0:15:42.14:0,42,574	0/0:25,0:21:57.11:0,57,743	0/0:19,0:19:51.17:0,51,733	1/1:0,1:1:3.01:37,3,0	./.	1/1:3,0:3:5.97:46,6,0	1/1:0,3:3:3.01:37,3,0	0/0:25,0:25:72.24:0,72,1035	0/0:20,0:20:54.17:0,54,759	1/1:0,2:2:3.01:37,3,0	./.	0/0:30,0:30:75.24:0,75,1063	1/1:0,2:2:3.01:37,3,0	1/1:0,3:3:3.01:37,3,0	0/0:24,0:22:48.16:0,48,691	0/0:24,0:22:54.18:0,54,776	1/1:0,2:2:6.02:74,6,0	./.	./.	1/1:1,2:2:3.01:37,3,0	./.	1/1:0,2:2:3.01:37,3,0	0/0:20,0:20:57.19:0,57,821	0/0:31,0:31:93.30:0,93,1322	1/1:0,2:2:3.01:37,3,0	0/0:6,0:6:18.06:0,18,259
chr10	50202099	.	T	TCCTTCCC	2785.15	PASS	AB=0.857;AC=33;AF=0.589;AN=56;BaseQRankSum=1.402;DP=437;FS=8.456;HRun=0;HaplotypeScore=107.1842;InbreedingCoeff=0.8085;MQ=67.02;MQ0=9;MQRankSum=-6.805;QD=11.37;ReadPosRankSum=-4.477;VQSLOD=-0.7291;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:19:21.07:395,21,0	1/1:2,6:9:6.02:96,6,0	0/0:20,0:14:9.67:0,10,587	0/0:39,0:20:31.16:0,31,557	0/0:16,0:16:45.63:0,46,1117	1/1:1,8:13:6.02:220,6,0	1/1:4,20:29:12.59:288,13,0	1/1:8,0:22:13.03:122,13,0	1/1:2,0:17:3.01:111,3,0	0/0:19,0:19:52.04:0,52,1057	0/0:10,0:10:23.97:0,24,590	1/1:4,0:4:6.02:105,6,0	1/1:14,0:14:21.43:376,21,0	0/0:13,0:13:33.11:0,33,760	1/1:7,10:17:11.62:267,12,0	1/1:3,4:7:3.01:115,3,0	0/0:19,0:19:31.05:0,31,1099	0/0:13,0:13:36.11:0,36,899	1/1:12,0:13:22.23:202,22,0	0/1:5,0:5:0.14:0,0,0	1/1:7,0:22:0.22:1,0,0	1/1:8,0:8:8.69:132,9,0	1/1:7,0:7:12.30:169,12,0	1/1:16,0:16:11.81:206,12,0	0/0:16,0:16:48.16:0,48,1228	0/0:22,0:22:63.14:0,63,1350	1/1:5,0:20:12.04:183,12,0	0/0:4,0:4:9.03:0,9,218
chr10	50202101	.	C	CTT	1359.05	PASS	AB=0.919;AC=24;AF=0.429;AN=56;BaseQRankSum=1.712;DP=403;FS=4.085;HRun=0;HaplotypeScore=75.2018;InbreedingCoeff=0.4196;MQ=65.41;MQ0=15;MQRankSum=-7.220;QD=7.64;ReadPosRankSum=-1.823;VQSLOD=2.3595;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:4,14:19:1.80:294,0,2	0/1:8,0:8:30.23:31,0,30	0/0:20,0:13:37.10:0,37,533	0/0:38,0:19:26.13:0,26,430	0/0:17,0:17:45.15:0,45,726	1/1:12,0:10:5.88:43,6,0	0/1:21,0:22:17.95:47,0,18	0/1:13,0:13:15.12:15,0,40	1/1:5,0:5:3.01:31,3,0	0/0:21,0:21:51.16:0,51,783	0/0:10,0:10:24.08:0,24,380	1/1:2,2:4:6.02:105,6,0	1/1:6,6:14:20.05:334,20,0	0/0:12,0:12:33.11:0,33,532	0/1:13,0:13:38.62:42,0,39	1/1:6,0:5:3:27,3,0	0/0:21,0:21:54.17:0,54,825	0/0:14,0:14:38.74:0,39,628	0/1:13,0:12:21.12:71,0,21	0/0:7,0:6:3:0,3,26	0/0:18,0:17:1.82:0,2,5	1/1:3,4:8:8.30:131,8,0	1/1:4,4:8:11.51:168,12,0	1/1:3,12:15:9.26:171,9,0	0/0:16,0:16:48.16:0,48,782	0/0:25,0:24:66.20:0,66,1021	1/1:18,0:18:5.24:34,5,0	0/0:6,0:4:9.03:0,9,147
chr10	50206615	.	CGTGTGTGTGTGTGTGTGTGT	C	1009.77	PASS	AC=12;AF=0.231;AN=52;BaseQRankSum=3.068;DP=561;FS=1.079;HRun=0;HaplotypeScore=272.0616;InbreedingCoeff=0.7743;MQ=58.23;MQ0=13;MQRankSum=-0.437;QD=7.89;ReadPosRankSum=0.396;VQSLOD=1.8546;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:27:6.02:81,6,0	0/0:5,0:10:6.02:0,6,249	./.	./.	0/0:13,0:15:9.03:0,9,526	0/0:18,0:20:27.08:0,27,1113	0/0:17,0:16:21.07:0,21,434	1/1:16,0:15:1.51:18,2,0	0/0:10,0:10:3.48:0,3,51	0/0:19,0:20:15.05:0,15,940	0/0:13,0:13:24.08:0,24,1270	0/0:24,0:25:21.07:0,21,402	0/0:10,0:15:10.75:0,11,161	0/0:23,0:23:39.09:0,39,1773	0/0:24,0:27:27.08:0,27,1133	0/0:15,0:17:9.03:0,9,425	0/0:31,0:30:39.13:0,39,1812	0/0:15,0:21:21.07:0,21,830	1/1:14,4:18:9.03:243,9,0	1/1:12,1:14:18.06:464,18,0	1/1:29,0:29:11.53:199,12,0	0/0:15,0:15:18.05:0,18,360	0/0:10,0:10:12.04:0,12,296	0/0:25,0:28:23.76:0,24,417	0/0:25,0:24:30.09:0,30,1383	0/0:15,0:15:15.04:0,15,572	1/1:17,6:23:4.26:162,4,0	0/0:13,0:11:18.06:0,18,1323
chr10	50209921	.	CTCCTCCTCT	C	351.25	PASS	AB=0.954;AC=9;AF=0.161;AN=56;BaseQRankSum=6.694;DP=471;FS=32.273;HRun=0;HaplotypeScore=122.1371;InbreedingCoeff=0.0056;MQ=54.55;MQ0=11;MQRankSum=-6.356;QD=2.86;ReadPosRankSum=1.887;VQSLOD=0.0668;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:26.41:0,26,170	1/1:6,0:5:3:25,3,0	0/0:25,0:9:20.81:0,21,267	0/0:16,0:9:20.22:0,20,199	0/0:26,0:26:75.20:0,75,2631	0/1:12,11:23:76:255,0,76	0/1:17,0:17:19.75:20,0,61	0/0:27,0:27:51.50:0,51,811	0/1:11,0:11:16.81:73,0,17	0/0:32,0:32:87.18:0,87,2436	0/0:14,0:14:42.07:0,42,1311	0/0:3,0:3:3.89:0,4,29	0/0:3,0:3:3:0,3,25	0/0:18,0:18:51.12:0,51,1921	0/1:13,0:12:10.94:33,0,11	0/1:10,0:9:3.24:3,0,8	0/0:27,0:27:56.92:0,57,1881	0/0:24,0:24:72.09:0,72,2086	0/1:23,0:23:22.15:22,0,693	0/0:16,0:16:37.52:0,38,783	0/0:12,0:12:27.71:0,28,321	0/0:9,0:9:8.95:0,9,69	0/0:5,0:5:5.99:0,6,50	0/1:20,0:20:51.84:52,0,60	0/0:21,0:21:63.18:0,63,2350	0/0:31,0:30:90.26:0,90,3297	0/0:13,0:13:6.95:0,7,143	0/0:10,0:10:30.09:0,30,1266
chr10	50209924	.	CTCCTCTTCCTCTTCTTCCTCT	C	693.58	PASS	AB=1.000;AC=16;AF=0.286;AN=56;BaseQRankSum=-1.508;DP=475;FS=5.832;HRun=0;HaplotypeScore=220.1880;InbreedingCoeff=0.3840;MQ=54.61;MQ0=10;MQRankSum=-3.438;QD=5.29;ReadPosRankSum=-5.347;VQSLOD=1.0402;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:15,0:15:49.34:207,0,49	0/0:5,0:4:3.01:0,3,30	0/0:23,0:9:21.07:0,21,693	0/0:15,0:10:24.01:0,24,666	0/0:28,0:28:79.51:0,80,6002	0/0:22,0:22:16.71:0,17,346	0/1:17,0:17:34.41:75,0,34	0/1:29,0:26:34.46:34,0,1704	0/0:10,0:10:4.29:0,4,62	0/0:33,0:33:84.26:0,84,5122	0/0:14,0:14:39.13:0,39,3080	1/1:2,0:2:1.25:3,1,0	1/1:2,0:2:5.89:39,6,0	0/0:19,0:19:51.17:0,51,4363	0/0:13,0:13:14.70:0,15,481	1/1:7,0:6:6.80:49,7,0	0/0:26,0:26:68.05:0,68,4459	0/0:26,0:26:75.23:0,75,4986	0/1:24,0:24:48.86:49,0,1300	0/0:17,0:17:2.55:0,3,1441	0/0:12,0:12:4.91:0,5,916	1/1:8,0:9:6.89:77,7,0	1/1:5,0:5:3:25,3,0	1/1:7,14:21:6.02:294,6,0	0/0:22,0:22:66.23:0,66,5627	0/0:31,0:30:84.27:0,84,6716	0/0:16,0:16:4.37:0,4,248	0/0:10,0:10:30.10:0,30,2795
chr10	50209927	.	CTCT	C	785.62	PASS	AB=1.000;AC=18;AF=0.333;AN=54;BaseQRankSum=4.812;DP=458;FS=23.330;HRun=0;HaplotypeScore=74.3888;InbreedingCoeff=0.5094;MQ=54.82;MQ0=11;MQRankSum=-5.475;QD=6.14;ReadPosRankSum=-3.385;VQSLOD=-0.1080;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:15,0:15:14.69:68,0,15	1/1:3,0:2:3:25,3,0	0/0:22,0:9:20.93:0,21,293	0/0:17,0:11:22.52:0,23,330	0/0:28,0:28:81.64:0,82,1495	0/1:20,0:20:42.20:42,0,46	1/1:4,10:14:15.05:234,15,0	0/0:26,0:22:16.64:0,17,387	1/1:2,7:9:6.02:98,6,0	0/0:32,0:32:87.25:0,87,1601	0/0:14,0:14:39.08:0,39,706	./.	1/1:4,0:4:8.37:57,8,0	0/0:19,0:19:53.96:0,54,1007	1/1:7,8:14:15.04:197,15,0	1/1:2,2:3:6.49:73,6,0	0/0:26,0:26:69.89:0,70,1199	0/0:26,0:26:75.09:0,75,1281	0/1:23,0:23:99:126,0,247	0/0:16,0:16:35.93:0,36,316	0/0:13,0:13:24.73:0,25,226	0/0:7,0:7:1.22:0,1,3	1/1:4,0:4:3:25,3,0	0/1:17,0:17:16.74:17,0,21	0/0:23,0:23:69.11:0,69,1176	0/0:30,0:29:84.18:0,84,1666	0/0:1,0:18:3.48:0,3,39	0/0:10,0:10:30.07:0,30,598
chr10	50209930	.	TTCC	T	315.43	PASS	AB=0.971;AC=10;AF=0.185;AN=54;BaseQRankSum=7.840;DP=440;FS=29.426;HRun=0;HaplotypeScore=74.2408;InbreedingCoeff=0.2224;MQ=54.81;MQ0=11;MQRankSum=-4.766;QD=3.39;ReadPosRankSum=-0.079;VQSLOD=-0.1138;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:9,4:13:16.96:109,0,17	0/1:3,0:2:0:0,0,0	0/0:21,0:9:18.04:0,18,299	0/0:16,0:11:23.08:0,23,363	0/0:28,0:28:81.75:0,82,1673	0/1:18,0:18:20.35:43,0,20	0/1:14,0:14:2.34:110,0,2	0/0:26,0:21:54.07:0,54,800	0/1:9,0:9:16.86:44,0,17	0/0:28,0:28:81.24:0,81,1566	0/0:14,0:14:42.13:0,42,832	./.	0/0:4,0:4:2.49:0,2,23	0/0:20,0:20:57.20:0,57,1194	0/1:15,0:14:2.82:94,0,3	1/1:4,0:3:5.56:29,6,0	0/0:25,0:25:75.08:0,75,1359	0/0:26,0:26:78.15:0,78,1426	0/0:21,0:21:37.40:0,37,510	0/0:18,0:18:47.54:0,48,707	0/0:12,0:12:27.29:0,27,399	0/0:7,0:7:5.99:0,6,50	0/1:3,0:3:0.01:0,0,0	0/1:14,0:14:14.94:15,0,27	0/0:24,0:24:72.24:0,72,1446	0/0:30,0:29:87.27:0,87,1771	0/0:15,0:15:3.48:0,3,53	0/0:10,0:10:30.10:0,30,650
chr10	50210580	.	TATAC	T	2265.71	PASS	AC=12;AF=0.231;AN=52;BaseQRankSum=0.159;DP=495;FS=0.597;HRun=0;HaplotypeScore=107.2064;InbreedingCoeff=0.9620;MQ=61.34;MQ0=2;MQRankSum=1.141;QD=16.54;ReadPosRankSum=0.048;VQSLOD=3.3915;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:16,17:33:27.09:426,27,0	0/0:8,0:9:9.01:0,9,129	./.	./.	0/0:20,0:20:36.11:0,36,766	0/0:11,0:14:24.86:0,25,225	0/0:12,0:13:14.37:0,14,151	1/1:30,0:30:32.90:314,33,0	0/0:15,0:21:24.46:0,24,219	0/0:17,0:17:42.12:0,42,848	0/0:23,0:23:42.09:0,42,829	0/0:18,0:18:36.12:0,36,845	0/0:14,0:14:24.07:0,24,519	0/0:12,0:12:30.09:0,30,622	0/0:16,0:21:16.17:0,16,115	0/0:14,0:19:25.73:0,26,300	0/0:21,0:21:39.09:0,39,876	0/0:26,0:26:47.97:0,48,932	1/1:8,5:13:15.01:237,15,0	1/1:8,13:21:33.11:521,33,0	1/1:4,4:8:9.03:142,9,0	0/0:11,0:11:21.07:0,21,496	0/0:13,0:13:21.05:0,21,450	0/0:15,0:15:24.08:0,24,521	0/0:17,0:17:39.11:0,39,836	0/0:23,0:23:45.14:0,45,963	1/1:8,24:32:51.17:805,51,0	0/0:13,0:13:27.09:0,27,629
chr10	50211822	.	AT	A	2027.72	PASS	AB=0.700;AC=13;AF=0.232;AN=56;BaseQRankSum=4.090;DP=621;FS=7.041;HRun=13;HaplotypeScore=70.1289;InbreedingCoeff=0.7169;MQ=64.81;MQ0=0;MQRankSum=1.169;QD=12.22;ReadPosRankSum=3.341;VQSLOD=3.6590;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,30:37:59.29:574,59,0	0/1:3,6:9:31.85:89,0,32	0/0:12,0:9:11.99:0,12,103	0/1:11,1:8:6.88:14,0,7	0/0:26,2:28:34.32:0,34,652	1/1:3,19:22:21.53:321,22,0	1/1:4,15:19:32.98:295,33,0	0/0:40,0:44:97.12:0,97,884	1/1:2,17:19:38.78:284,39,0	0/0:19,0:19:30.05:0,30,292	0/0:15,0:16:41.89:0,42,387	0/0:5,0:20:28.56:0,29,153	0/0:4,0:11:28.88:0,29,178	0/0:17,0:17:36.03:0,36,338	0/1:5,14:19:17:209,0,17	1/1:4,25:29:36.36:425,36,0	0/0:34,0:34:77.48:0,77,784	0/0:26,0:27:71.67:0,72,642	0/0:23,1:26:40.85:0,41,525	0/0:26,1:28:41.01:0,41,538	0/0:17,0:17:36.06:0,36,350	0/0:5,0:14:28.68:0,29,154	0/0:2,0:21:42.61:0,43,213	0/0:2,0:21:45.55:0,46,231	0/0:23,0:23:66.10:0,66,638	0/0:21,0:21:42.02:0,42,398	0/0:35,0:35:75.02:0,75,692	0/0:18,1:20:41.85:0,42,375
chr10	50212603	.	GGTGTGTGT	G	1015.93	PASS	AB=0.949;AC=20;AF=0.400;AN=50;BaseQRankSum=2.432;DP=548;FS=1.033;HRun=0;HaplotypeScore=139.7368;InbreedingCoeff=0.4797;MQ=62.80;MQ0=22;MQRankSum=-5.814;QD=4.77;ReadPosRankSum=-0.107;VQSLOD=2.6635;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:30,2:32:2.96:20,3,0	1/1:6,1:7:3.01:74,3,0	./.	./.	0/0:12,0:11:12.04:0,12,294	1/1:13,0:13:3.01:62,3,0	0/1:25,4:26:0:0,0,0	./.	1/1:14,7:21:5.88:93,6,0	0/0:19,0:19:15.05:0,15,347	0/0:8,0:9:9.03:0,9,215	0/0:12,0:12:21.07:0,21,459	0/0:17,0:20:5.13:0,5,252	0/0:22,0:20:24.55:0,25,617	1/1:19,2:21:6.01:110,6,0	1/1:14,1:19:12.03:230,12,0	0/0:25,0:23:26.83:0,27,694	0/1:15,0:16:8.33:8,0,407	0/1:18,0:17:67.81:68,0,99	1/1:10,0:10:6.02:142,6,0	0/0:27,0:25:0.89:0,1,2	0/0:13,0:12:3.01:0,3,38	0/1:10,0:11:18:18,0,119	0/0:33,0:37:48.09:0,48,912	0/0:11,0:12:9.03:0,9,125	0/0:14,0:13:9.01:0,9,98	1/1:10,3:14:15.05:351,15,0	0/0:16,0:14:15.03:0,15,352
chr10	50215076	.	G	GGAATACCGCA	12923.27	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=-5.148;DP=347;FS=96.375;HRun=0;HaplotypeScore=134.7154;InbreedingCoeff=0.8744;MQ=93.63;MQ0=0;MQRankSum=-11.358;QD=114.37;ReadPosRankSum=1.929;VQSLOD=1.7448;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:51.18:0,51,1728	1/1:0,2:2:6.02:328,6,0	0/0:17,0:17:51.17:0,51,1511	0/0:21,0:21:57.12:0,57,1744	0/0:17,0:17:48.15:0,48,1509	1/1:5,12:18:51.18:2683,51,0	1/1:2,4:6:12.79:817,13,0	0/0:28,0:28:84.28:0,84,2664	1/1:1,6:8:21.07:1141,21,0	0/0:21,0:21:60.16:0,60,1889	0/0:13,0:13:39.13:0,39,1306	1/1:1,9:12:30.10:1628,30,0	1/1:2,9:15:36.12:1911,36,0	0/0:12,0:12:33.11:0,33,1049	1/1:2,4:8:18.06:961,18,0	1/1:2,5:9:21.07:1130,21,0	0/0:14,0:14:39.13:0,39,1328	0/0:8,0:8:24.04:0,24,701	0/0:13,0:13:26.45:0,26,1135	0/1:17,0:17:18.59:19,0,1420	0/0:10,0:10:30.10:0,30,1038	1/1:0,5:5:15.05:821,15,0	1/1:3,5:10:27.09:1321,27,0	1/1:1,2:3:3.01:164,3,0	0/0:5,0:5:15.05:0,15,524	0/0:13,0:13:33.32:0,33,1116	0/0:18,0:18:43.33:0,43,1628	0/0:6,0:6:18.06:0,18,622
chr10	50217267	.	A	AT	5099.56	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=2.197;DP=570;FS=6.436;HRun=7;HaplotypeScore=69.5032;InbreedingCoeff=0.9798;MQ=67.70;MQ0=1;MQRankSum=-0.250;QD=19.77;ReadPosRankSum=2.750;VQSLOD=4.3676;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,26:28:63.19:758,63,0	1/1:4,3:7:9.03:109,9,0	0/0:15,0:13:29.47:0,29,253	0/0:7,0:5:14.15:0,14,93	0/0:30,0:30:81.09:0,81,770	1/1:1,18:19:51.16:613,51,0	1/1:5,8:13:21.06:254,21,0	1/1:9,0:34:81.08:452,81,0	1/1:2,16:18:45.14:543,45,0	0/0:25,0:25:65.76:0,66,613	0/0:18,0:18:48.06:0,48,457	0/0:13,0:13:33.03:0,33,312	0/0:21,0:21:60.10:0,60,579	0/0:25,0:25:63.04:0,63,589	1/1:3,22:25:54.17:653,54,0	1/1:2,17:19:48.15:580,48,0	0/0:29,0:29:81.07:0,81,764	0/0:23,0:23:66.07:0,66,628	1/1:9,0:27:52.08:286,52,0	1/1:2,0:30:80.81:428,81,0	1/1:2,0:11:23:117,23,0	0/0:9,0:9:27.04:0,27,257	0/0:13,0:13:36.04:0,36,341	0/0:3,0:3:9.01:0,9,87	0/0:35,0:35:99:0,99,927	0/0:34,0:34:90.11:0,90,857	1/1:2,0:26:40.15:307,40,0	0/0:12,0:12:36.06:0,36,347
chr10	50219178	.	CTTTTTTTTT	C	4188.53	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=7.572;DP=540;FS=2.221;HRun=19;HaplotypeScore=145.5586;InbreedingCoeff=0.9278;MQ=59.23;MQ0=16;MQRankSum=-2.987;QD=32.98;ReadPosRankSum=4.757;VQSLOD=-0.5736;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:26:61.72:0,62,1709	0/0:5,0:5:15.05:0,15,477	0/0:19,0:10:8.21:0,8,137	0/0:9,0:6:5.48:0,5,112	0/0:23,0:25:54.17:0,54,1478	0/0:12,0:15:39.13:0,39,1325	0/0:19,0:19:45.15:0,45,1566	1/1:18,20:39:58.07:1043,58,0	0/0:11,0:11:33.11:0,33,1171	0/0:24,0:27:66.22:0,66,1944	0/0:11,0:14:33.11:0,33,1156	0/0:15,0:16:36.12:0,36,1293	0/0:21,0:20:48.16:0,48,1442	0/0:13,0:13:27.08:0,27,752	0/0:15,0:19:39.13:0,39,1170	0/0:12,0:13:36.12:0,36,1131	0/0:29,0:32:83.50:0,83,2615	0/0:17,0:18:42.14:0,42,1270	1/1:9,18:27:59.46:1043,59,0	1/1:7,14:21:24.60:626,25,0	1/1:3,5:8:5.96:103,6,0	0/0:9,0:12:36.11:0,36,1135	0/0:14,0:15:27.09:0,27,801	0/0:13,0:20:33.96:0,34,1054	0/0:19,0:21:56.36:0,56,1791	0/0:18,0:19:45.15:0,45,1682	1/1:2,29:31:60.13:1374,60,0	0/0:12,0:9:21.07:0,21,823
chr10	50220052	.	GT	G	5881.91	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=13.602;DP=882;FS=1.879;HRun=2;HaplotypeScore=84.4005;InbreedingCoeff=1.0000;MQ=80.52;MQ0=0;MQRankSum=-0.294;QD=35.22;ReadPosRankSum=1.513;VQSLOD=5.2993;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,144,2131	1/1:0,17:17:45.15:584,45,0	0/0:24,0:24:68.96:0,69,950	0/0:21,0:21:57.17:0,57,815	0/0:33,0:33:99:0,99,1467	1/1:0,26:26:72.23:935,72,0	1/1:2,33:35:93.30:1208,93,0	0/0:23,0:23:69.23:0,69,1018	1/1:0,25:25:69.22:896,69,0	0/0:39,0:39:99:0,117,1709	0/0:27,0:27:78.26:0,78,1142	0/0:55,0:55:99:0,166,2473	0/0:45,0:45:99:0,135,1974	0/0:41,0:41:99:0,117,1692	1/1:1,30:31:78.25:1013,78,0	1/1:0,33:33:96.31:1247,96,0	0/0:41,0:41:99:0,123,1815	0/0:25,0:25:75.24:0,75,1103	0/0:26,0:26:75.25:0,75,1123	0/0:24,0:24:72.24:0,72,1078	0/0:54,0:54:99:0,163,2366	0/0:26,0:26:75.25:0,75,1121	0/0:16,0:16:48.15:0,48,699	0/0:41,0:41:99:0,123,1823	0/0:41,0:41:99:0,123,1777	0/0:25,0:25:72.24:0,72,1062	0/0:24,0:24:72.24:0,72,1078	0/0:16,0:16:45.15:0,45,674
chr10	50220665	.	TTCTCTCTCTCTCTCTCTCTC	T	1963.94	PASS	AB=0.756;AC=7;AF=0.125;AN=56;BaseQRankSum=6.143;DP=657;FS=3.073;HRun=0;HaplotypeScore=309.1660;InbreedingCoeff=0.4156;MQ=66.67;MQ0=5;MQRankSum=-3.364;QD=15.34;ReadPosRankSum=-0.003;VQSLOD=1.8690;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:31:13.72:0,14,836	0/0:8,0:11:18.06:0,18,650	0/0:19,0:18:6.02:0,6,85	0/0:33,0:20:7.27:0,7,89	0/0:26,0:26:24.08:0,24,1564	0/0:22,0:26:42.14:0,42,1799	0/0:12,0:15:18.05:0,18,580	1/1:26,4:29:7.82:139,8,0	0/0:20,0:21:24.07:0,24,1019	0/0:30,0:31:47.19:0,47,3140	0/0:22,0:22:21.07:0,21,1116	0/0:23,0:23:30.19:0,30,2204	0/0:28,0:28:54.18:0,54,3098	0/0:13,0:13:12.04:0,12,782	0/0:19,0:31:45.12:0,45,1790	0/0:14,0:19:21.07:0,21,1082	0/0:28,0:30:59.01:0,59,4332	0/0:14,0:13:30.09:0,30,1734	0/1:12,6:19:13.50:327,0,13	0/1:20,7:27:26.71:191,0,27	0/1:17,9:26:33.26:56,0,33	0/0:27,0:27:24.54:0,25,1481	0/0:16,0:20:6.49:0,6,427	0/0:22,0:32:12.04:0,12,618	0/0:20,0:20:24.07:0,24,1009	0/0:20,0:20:21.07:0,21,1155	1/1:12,14:26:29.85:1387,30,0	0/0:15,0:14:25.64:0,26,1618
chr10	50221680	.	TCTGGGAGAGACAAA	T	9543.11	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=13.547;DP=664;FS=2.050;HRun=0;HaplotypeScore=259.9557;InbreedingCoeff=0.9862;MQ=78.33;MQ0=2;MQRankSum=-12.903;QD=98.38;ReadPosRankSum=1.134;VQSLOD=4.7436;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:45.15:0,45,2841	0/0:16,0:16:45.15:0,45,3101	0/0:27,0:26:73.13:0,73,3786	0/0:18,0:17:48.16:0,48,2023	0/0:37,0:36:99:0,111,7614	0/0:25,0:25:72.25:0,72,5015	0/0:19,0:19:57.18:0,57,3436	1/1:3,15:18:45.14:1817,45,0	0/0:16,0:16:48.16:0,48,3218	0/0:28,0:28:84.29:0,84,5778	0/0:28,0:28:81.28:0,81,5410	0/0:21,0:21:60.19:0,60,3759	0/0:25,0:25:69.22:0,69,4597	0/0:24,0:24:72.23:0,72,4765	0/0:24,0:24:69.24:0,69,4398	0/0:29,0:28:87.30:0,87,5642	0/0:29,0:29:81.28:0,81,5578	0/0:26,0:26:78.27:0,78,5445	1/1:6,10:16:30.09:1101,30,0	1/1:6,26:32:78.27:3298,78,0	1/1:0,4:4:9.03:383,9,0	0/0:38,0:38:99:0,111,7612	0/0:27,0:27:81.28:0,81,5129	0/0:15,0:15:42.14:0,42,2692	0/0:31,0:31:90.31:0,90,6028	0/0:26,0:26:75.24:0,75,4627	1/1:2,25:27:69.24:2944,69,0	0/0:21,0:21:60.17:0,60,3756
chr10	50227090	.	ATGTG	A	6746.72	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=14.356;DP=733;FS=1.152;HRun=0;HaplotypeScore=120.8582;InbreedingCoeff=1.0000;MQ=89.90;MQ0=0;MQRankSum=-7.190;QD=46.21;ReadPosRankSum=-1.012;VQSLOD=4.8653;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:66.23:0,66,1780	0/0:14,0:14:42.14:0,42,1121	0/0:24,0:24:69.24:0,69,1755	0/0:36,0:37:88.34:0,88,2271	0/0:36,0:36:99:0,102,2738	0/0:35,0:35:96.32:0,96,2461	0/0:22,0:22:60.21:0,60,1587	1/1:6,39:45:99:2134,117,0	0/0:22,0:22:66.23:0,66,1775	0/0:28,0:28:81.27:0,81,2115	0/0:22,0:22:66.23:0,66,1769	0/0:18,0:18:54.19:0,54,1420	0/0:36,0:36:99:0,108,2898	0/0:23,0:23:66.23:0,66,1770	0/0:28,0:28:84.27:0,84,2172	0/0:28,0:28:81.27:0,81,2132	0/0:23,0:23:66.23:0,66,1773	0/0:16,0:16:42.14:0,42,1116	1/1:4,26:30:78.23:1389,78,0	1/1:2,28:30:75.17:1344,75,0	1/1:0,17:17:48.08:871,48,0	0/0:22,0:22:63.21:0,63,1591	0/0:32,0:32:93.30:0,93,2428	0/0:23,0:23:69.22:0,69,1797	0/0:26,0:26:78.27:0,78,2075	0/0:31,0:31:90.30:0,90,2343	1/1:2,22:24:54.18:1008,54,0	0/0:19,0:19:57.20:0,57,1536
chr10	50229700	.	G	GA	4243.30	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=3.424;DP=694;FS=2.003;HRun=11;HaplotypeScore=107.6004;InbreedingCoeff=0.9200;MQ=81.45;MQ0=5;MQRankSum=-3.340;QD=17.75;ReadPosRankSum=1.541;VQSLOD=4.9874;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:39,1:41:67.16:0,67,688	1/1:2,5:7:15.92:154,16,0	0/0:33,1:27:40.22:0,40,243	0/0:41,0:34:25.90:0,26,240	0/0:40,0:41:68.99:0,69,665	1/1:2,15:17:15.84:342,16,0	1/1:2,14:16:36.07:365,36,0	0/0:23,0:23:39.63:0,40,300	1/1:9,10:21:43.35:375,43,0	0/0:20,0:20:41.70:0,42,317	0/0:16,0:16:24.34:0,24,184	1/1:11,15:26:1.79:376,2,0	1/1:7,20:27:30.61:492,31,0	0/0:23,0:24:58.77:0,59,441	1/1:11,21:34:16.79:501,17,0	1/1:10,9:19:0.41:189,0,0	0/0:15,0:15:38.83:0,39,302	0/0:20,1:21:17.92:0,18,301	0/0:26,0:27:55.70:0,56,421	0/0:20,2:22:16.34:0,16,355	0/0:18,0:20:48.47:0,48,345	1/1:5,8:13:30.93:295,31,0	1/1:5,22:29:53.07:507,53,0	1/1:5,25:30:45.91:647,46,0	0/0:25,2:28:15.47:0,15,463	0/0:29,1:30:42.52:0,43,491	0/0:41,1:42:54.39:0,54,758	0/0:7,0:7:14.63:0,15,102
chr10	50232563	.	T	TAATA	26374.28	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=-16.202;DP=716;FS=0.000;HRun=0;HaplotypeScore=100.5488;InbreedingCoeff=0.9995;MQ=80.96;MQ0=0;MQRankSum=-4.281;QD=61.34;ReadPosRankSum=0.167;VQSLOD=6.5729;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:78.27:0,78,1397	1/1:0,10:10:30.10:792,30,0	0/0:20,0:20:51.13:0,51,860	0/0:22,0:22:57.19:0,57,972	0/0:29,0:29:75.23:0,75,1331	1/1:4,25:30:66.23:1735,66,0	1/1:7,20:28:51.18:1333,51,0	1/1:11,24:36:84.29:2143,84,0	1/1:1,19:20:57.20:1503,57,0	0/0:24,0:24:69.23:0,69,1241	0/0:33,0:33:93.30:0,93,1679	1/1:3,19:23:60.20:1526,60,0	1/1:5,30:38:90.31:2364,90,0	0/0:12,0:12:30.10:0,30,546	1/1:2,24:26:63.22:1657,63,0	1/1:3,24:28:69.24:1799,69,0	0/0:22,0:22:57.19:0,57,1007	0/0:24,0:24:69.19:0,69,1234	1/1:8,20:32:78.24:1864,78,0	1/1:3,27:31:84.29:2085,84,0	1/1:2,18:21:48.16:1260,48,0	1/1:3,26:29:72.24:1756,72,0	1/1:3,28:32:75.26:1962,75,0	1/1:0,12:13:30.10:782,30,0	0/0:34,0:34:96.31:0,96,1704	0/0:30,0:30:78.27:0,78,1417	1/1:4,29:33:69.24:1813,69,0	0/0:9,0:9:23.92:0,24,441
chr10	50232692	.	AT	A	11199.96	PASS	AB=0.524;AC=33;AF=0.589;AN=56;BaseQRankSum=10.548;DP=633;FS=0.998;HRun=6;HaplotypeScore=65.7639;InbreedingCoeff=0.9323;MQ=85.72;MQ0=1;MQRankSum=-3.272;QD=28.35;ReadPosRankSum=1.557;VQSLOD=5.5286;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,42:44:99:1322,123,0	0/1:1,10:11:9.40:260,0,9	0/0:27,0:26:63.11:0,63,778	0/0:18,0:18:43.89:0,44,485	0/0:26,0:26:78.24:0,78,1011	1/1:1,26:27:69.17:742,69,0	1/1:2,20:22:57.14:613,57,0	1/1:3,26:29:75.17:797,75,0	1/1:0,10:10:24.06:258,24,0	0/0:23,0:23:69.22:0,69,908	0/0:23,0:23:63.19:0,63,811	1/1:0,22:22:63.16:676,63,0	1/1:2,36:38:99:1128,105,0	0/0:17,0:17:39.13:0,39,511	1/1:0,26:26:78.20:838,78,0	1/1:4,17:21:51.13:548,51,0	0/0:26,0:26:72.21:0,72,917	0/0:23,0:23:66.15:0,66,832	1/1:0,16:16:48.09:504,48,0	1/1:4,20:24:60.14:644,60,0	1/1:1,13:14:36.09:387,36,0	1/1:2,17:19:45.11:483,45,0	1/1:1,20:21:54.14:580,54,0	1/1:3,27:30:72.18:774,72,0	0/0:25,0:25:72.22:0,72,933	0/0:24,0:24:69.20:0,69,880	1/1:0,21:21:60.15:645,60,0	0/0:6,0:6:18.06:0,18,237
chr10	50232825	.	GA	G	5230.63	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=12.404;DP=745;FS=4.516;HRun=3;HaplotypeScore=73.6922;InbreedingCoeff=0.9998;MQ=85.40;MQ0=0;MQRankSum=-5.604;QD=33.75;ReadPosRankSum=-1.412;VQSLOD=4.7469;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,157,2184	0/0:10,0:10:30.10:0,30,432	0/0:29,0:30:65.38:0,65,1013	0/0:27,0:27:56.83:0,57,885	0/0:26,0:26:78.22:0,78,1063	0/0:23,0:23:69.21:0,69,957	0/0:24,0:24:69.18:0,69,920	1/1:0,27:27:81.22:967,81,0	0/0:20,0:20:60.18:0,60,843	0/0:28,0:28:75.23:0,75,1032	0/0:20,0:20:60.20:0,60,862	0/0:22,0:22:66.21:0,66,933	0/0:30,0:30:84.25:0,84,1181	0/0:24,0:24:69.23:0,69,993	0/0:32,0:32:93.31:0,93,1339	0/0:23,0:23:66.21:0,66,931	0/0:32,0:32:96.26:0,96,1305	0/0:18,0:18:54.18:0,54,772	1/1:1,25:26:75.14:870,75,0	1/1:0,30:30:87.23:1058,87,0	1/1:2,36:38:93.29:1152,93,0	0/0:22,0:22:63.21:0,63,906	0/0:30,0:30:81.19:0,81,1120	0/0:33,0:33:96.31:0,96,1358	0/0:30,0:30:81.26:0,81,1147	0/0:20,0:20:57.19:0,57,820	1/1:0,34:34:96.25:1184,96,0	0/0:11,0:11:30.08:0,30,410
chr10	50233303	.	C	CA	5522.85	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-12.366;DP=874;FS=5.790;HRun=4;HaplotypeScore=89.7837;InbreedingCoeff=0.9990;MQ=67.78;MQ0=1;MQRankSum=0.185;QD=34.95;ReadPosRankSum=3.759;VQSLOD=5.1944;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:75.17:0,75,833	0/0:14,0:14:39.09:0,39,432	0/0:47,0:39:81.03:0,81,986	0/0:30,0:26:35.48:0,35,526	0/0:36,0:36:99:0,105,1191	0/0:31,0:31:87.25:0,87,986	0/0:27,1:28:40.70:0,41,771	0/0:37,0:37:99:0,105,1182	0/0:32,0:32:90.26:0,90,1021	0/0:46,0:46:99:0,129,1446	0/0:37,0:37:99:0,102,1153	1/1:3,30:33:84.28:1149,84,0	1/1:2,40:42:99:1519,111,0	0/0:40,0:40:99:0,120,1331	0/0:36,0:36:99:0,102,1133	0/0:35,0:35:99:0,99,1112	0/0:33,0:33:94.95:0,95,1083	0/0:23,0:23:54.07:0,54,574	0/0:20,0:20:57.16:0,57,645	0/0:35,0:35:99:0,99,1123	0/0:27,0:27:67.06:0,67,809	1/1:5,23:28:72.24:977,72,0	1/1:2,29:31:84.28:1140,84,0	1/1:3,21:24:54.18:739,54,0	0/0:26,0:26:75.20:0,75,841	0/0:35,0:35:96.27:0,96,1088	0/0:29,0:29:84.22:0,84,942	0/0:7,0:7:21.06:0,21,238
chr10	50233353	.	ATT	A	589.30	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.677;DP=826;FS=0.000;HRun=2;HaplotypeScore=105.8076;InbreedingCoeff=0.9999;MQ=79.13;MQ0=0;MQRankSum=-4.135;QD=25.62;ReadPosRankSum=0.974;VQSLOD=2.4351;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,21:23:48.13:684,48,0	0/0:18,0:18:54.19:0,54,1061	0/0:23,0:23:66.17:0,66,1219	0/0:24,0:24:65.22:0,65,1265	0/0:41,0:41:99:0,123,2356	0/0:35,0:35:99:0,105,2033	0/0:16,0:16:48.16:0,48,921	0/0:34,0:34:99:0,102,1962	0/0:27,0:27:81.28:0,81,1581	0/0:39,0:39:99:0,117,2329	0/0:31,0:31:93.32:0,93,1850	0/0:38,0:38:99:0,114,2270	0/0:41,0:41:99:0,117,2325	0/0:37,0:37:99:0,111,2203	0/0:35,0:35:99:0,105,1934	0/0:38,0:38:99:0,114,2236	0/0:29,0:29:87.30:0,87,1738	0/0:24,0:24:72.25:0,72,1428	0/0:13,0:13:39.13:0,39,760	0/0:26,0:26:78.27:0,78,1559	0/0:28,0:28:84.27:0,84,1611	0/0:31,0:31:93.32:0,93,1858	0/0:34,0:34:99:0,99,1942	0/0:31,0:31:84.29:0,84,1665	0/0:29,0:29:84.29:0,84,1660	0/0:39,0:39:99:0,117,2303	0/0:28,0:28:84.29:0,84,1669	0/0:14,0:14:42.14:0,42,839
chr10	50235076	.	CTCTA	C	6223.96	PASS	AB=0.714;AC=47;AF=0.940;AN=50;BaseQRankSum=4.738;DP=660;FS=0.000;HRun=0;HaplotypeScore=141.7264;InbreedingCoeff=0.4051;MQ=71.18;MQ0=2;MQRankSum=0.059;QD=11.11;ReadPosRankSum=2.748;VQSLOD=3.8943;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:22,12:34:36.12:547,36,0	1/1:6,0:8:5.98:49,6,0	./.	./.	1/1:20,0:26:2.37:8,2,0	1/1:14,0:24:8.98:77,9,0	1/1:5,0:9:2.04:6,2,0	./.	1/1:11,0:26:29.92:252,30,0	1/1:21,18:39:52.40:789,52,0	1/1:9,18:27:41.89:552,42,0	1/1:11,10:21:18.06:274,18,0	1/1:13,20:33:42.14:638,42,0	1/1:11,16:27:26.99:410,27,0	1/1:9,0:22:20:157,20,0	1/1:13,0:26:25.82:219,26,0	0/0:26,0:26:42.10:0,42,906	0/1:9,0:15:39.94:40,0,68	1/1:16,0:20:12.01:111,12,0	1/1:8,0:16:20.19:148,20,0	1/1:17,0:17:12.02:131,12,0	1/1:15,0:31:13.61:106,14,0	1/1:7,0:17:14.25:110,14,0	1/1:10,0:15:2.95:23,3,0	1/1:15,17:32:33.11:502,33,0	1/1:16,12:28:36.08:502,36,0	1/1:7,0:30:48.10:359,48,0	1/1:9,8:16:4.41:215,4,0
chr10	50235581	.	CAT	C	5870.74	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=14.898;DP=703;FS=17.072;HRun=0;HaplotypeScore=110.8792;InbreedingCoeff=0.9990;MQ=88.23;MQ0=0;MQRankSum=-3.303;QD=43.81;ReadPosRankSum=2.433;VQSLOD=5.0729;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:69.24:0,69,1398	1/1:0,13:13:33.11:532,33,0	0/0:26,0:26:78.23:0,78,1417	0/0:26,0:26:75.20:0,75,1361	0/0:30,0:30:90.26:0,90,1689	1/1:0,23:23:63.22:1020,63,0	1/1:1,19:20:45.15:728,45,0	0/0:50,0:50:99:0,150,2878	1/1:0,26:26:75.26:1211,75,0	0/0:34,0:34:99:0,102,1999	0/0:16,0:16:48.14:0,48,902	0/0:28,0:28:84.25:0,84,1585	0/0:31,0:31:93.31:0,93,1829	0/0:23,0:23:69.22:0,69,1360	1/1:0,24:24:69.24:1114,69,0	1/1:0,28:28:78.27:1265,78,0	0/0:12,0:12:36.05:0,36,651	0/0:19,0:18:57.17:0,57,1084	0/0:20,0:20:60.16:0,60,1110	0/0:21,0:21:63.22:0,63,1235	0/0:32,0:32:93.25:0,93,1699	0/0:21,0:21:60.16:0,60,1142	0/0:22,0:22:66.20:0,66,1267	0/0:11,0:11:33.09:0,33,632	0/0:25,0:25:75.07:0,75,1426	0/0:31,0:31:93.32:0,93,1884	0/0:61,0:60:99:0,184,3638	0/0:7,0:7:21.07:0,21,426
chr10	50236398	.	CA	C	4226.03	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=13.490;DP=732;FS=21.566;HRun=1;HaplotypeScore=110.5420;InbreedingCoeff=0.9982;MQ=85.04;MQ0=0;MQRankSum=-2.287;QD=34.64;ReadPosRankSum=2.273;VQSLOD=3.1164;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,129,2019	1/1:0,12:12:36.12:503,36,0	0/0:19,0:19:57.19:0,57,874	0/0:26,0:26:78.17:0,78,1102	0/0:19,0:19:57.17:0,57,864	1/1:0,29:29:60.20:835,60,0	1/1:0,19:19:48.16:667,48,0	0/0:31,0:31:87.28:0,87,1349	1/1:0,25:25:66.22:922,66,0	0/0:29,0:29:87.28:0,87,1349	0/0:20,0:20:60.17:0,60,904	0/0:40,0:40:99:0,120,1861	0/0:32,0:32:96.33:0,96,1531	0/0:36,0:36:99:0,105,1650	1/1:0,26:26:63.21:879,63,0	1/1:0,11:11:30.10:419,30,0	0/0:33,0:33:99:0,99,1544	0/0:30,0:30:90.28:0,90,1398	0/0:23,0:22:69.22:0,69,1054	0/0:19,0:19:57.18:0,57,888	0/0:58,0:58:99:0,171,2721	0/0:23,0:23:69.24:0,69,1097	0/0:25,0:25:72.23:0,72,1121	0/0:31,0:31:93.30:0,93,1458	0/0:23,0:23:66.19:0,66,1002	0/0:25,0:25:75.24:0,75,1173	0/0:18,0:18:51.16:0,51,789	0/0:6,0:6:18.04:0,18,263
chr10	50236928	.	C	CT	6169.76	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-13.936;DP=717;FS=1.518;HRun=1;HaplotypeScore=68.4699;InbreedingCoeff=0.9997;MQ=87.33;MQ0=0;MQRankSum=-4.159;QD=41.41;ReadPosRankSum=-2.036;VQSLOD=4.6223;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,111,1440	0/0:11,0:11:27.09:0,27,350	0/0:29,0:29:80.82:0,81,965	0/0:25,0:25:61.12:0,61,710	0/0:24,0:24:66.19:0,66,841	0/0:26,0:26:78.24:0,78,998	0/0:18,0:18:54.16:0,54,687	1/1:0,37:37:99:1584,111,0	0/0:29,0:29:87.27:0,87,1115	0/0:30,0:30:87.26:0,87,1095	0/0:22,0:22:57.17:0,57,727	0/0:34,0:34:99:0,102,1323	0/0:25,0:25:72.23:0,72,933	0/0:22,0:22:63.20:0,63,818	0/0:27,0:27:78.25:0,78,1011	0/0:28,0:28:78.23:0,78,985	0/0:31,0:31:93.30:0,93,1207	0/0:27,0:27:78.25:0,78,1009	1/1:1,25:26:75.24:1104,75,0	1/1:1,31:32:87.25:1279,87,0	1/1:2,27:29:75.25:1124,75,0	0/0:14,0:14:42.14:0,42,544	0/0:12,0:12:33.11:0,33,429	0/0:23,0:23:69.22:0,69,896	0/0:32,0:32:96.29:0,96,1230	0/0:26,0:26:78.25:0,78,1000	1/1:0,25:25:72.24:1079,72,0	0/0:16,0:16:48.14:0,48,605
chr10	50237196	.	GATGCAC	G	8258.31	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=15.605;DP=854;FS=4.842;HRun=0;HaplotypeScore=181.1434;InbreedingCoeff=0.9997;MQ=66.06;MQ0=0;MQRankSum=-17.455;QD=44.16;ReadPosRankSum=1.099;VQSLOD=4.7825;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,114,3730	1/1:3,22:25:57.20:1290,57,0	0/0:20,0:16:27.09:0,27,539	0/0:20,0:17:29.84:0,30,607	0/0:35,0:35:93.27:0,93,2875	1/1:3,27:30:81.19:1736,81,0	1/1:9,29:38:57.15:1211,57,0	0/0:25,0:25:63.22:0,63,2132	1/1:1,24:25:53.83:1191,54,0	0/0:39,0:39:93.32:0,93,3118	0/0:25,0:25:69.24:0,69,2296	0/0:44,0:44:99:0,114,3731	0/0:39,0:39:99:0,117,3853	0/0:43,0:43:99:0,123,4230	1/1:5,26:31:60.21:1327,60,0	1/1:3,35:38:72.16:1503,72,0	0/0:29,0:29:81.26:0,81,2612	0/0:19,0:19:54.19:0,54,1787	0/0:17,0:17:36.11:0,36,1143	0/0:26,0:25:69.22:0,69,2211	0/0:62,0:62:99:0,181,6050	0/0:22,0:22:60.19:0,60,1899	0/0:22,0:22:63.22:0,63,2041	0/0:27,0:27:81.28:0,81,2770	0/0:26,0:26:66.23:0,66,2234	0/0:42,0:42:99:0,114,3707	0/0:25,0:24:69.24:0,69,2305	0/0:16,0:16:48.16:0,48,1612
chr10	50238507	.	AG	A	5769.45	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=12.763;DP=776;FS=4.600;HRun=1;HaplotypeScore=110.5828;InbreedingCoeff=0.9999;MQ=90.77;MQ0=0;MQRankSum=-7.009;QD=39.79;ReadPosRankSum=0.391;VQSLOD=4.5897;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,141,2230	0/0:10,0:10:30.10:0,30,480	0/0:33,0:33:93.31:0,93,1451	0/0:33,0:33:83.13:0,83,1260	0/0:25,0:25:75.24:0,75,1170	0/0:24,0:24:72.23:0,72,1121	0/0:22,0:22:63.21:0,63,1007	1/1:0,33:33:96.32:1343,96,0	0/0:27,0:27:81.25:0,81,1248	0/0:27,0:27:78.25:0,78,1207	0/0:14,0:14:42.14:0,42,671	0/0:41,0:41:99:0,123,1943	0/0:40,0:40:99:0,120,1912	0/0:36,0:36:99:0,105,1655	0/0:30,0:30:90.31:0,90,1431	0/0:17,0:17:51.17:0,51,815	0/0:31,0:31:93.29:0,93,1461	0/0:21,0:21:60.20:0,60,959	1/1:1,16:17:48.13:651,48,0	1/1:0,25:25:72.24:1007,72,0	1/1:0,52:52:99:2056,147,0	0/0:18,0:18:54.18:0,54,863	0/0:20,0:20:60.19:0,60,935	0/0:40,0:40:99:0,120,1916	0/0:21,0:21:63.20:0,63,984	0/0:39,0:39:99:0,114,1766	1/1:0,18:18:51.17:712,51,0	0/0:15,0:15:45.15:0,45,719
chr10	50239680	.	AT	A	2617.15	PASS	AB=0.935;AC=26;AF=0.464;AN=56;BaseQRankSum=11.923;DP=453;FS=0.840;HRun=13;HaplotypeScore=63.1573;InbreedingCoeff=0.7444;MQ=66.33;MQ0=0;MQRankSum=-0.044;QD=11.00;ReadPosRankSum=1.127;VQSLOD=3.3060;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:19,2:21:1.43:1,0,299	1/1:4,4:8:14.89:109,15,0	0/1:11,1:10:23.27:23,0,33	0/0:8,0:7:14.34:0,14,107	0/0:28,0:28:75:0,75,701	1/1:2,8:10:20.85:153,21,0	1/1:0,14:14:32.81:241,33,0	1/1:5,22:27:65.53:475,66,0	1/1:5,10:16:12.67:184,13,0	0/0:18,1:19:11.15:0,11,267	0/0:26,1:27:23.26:0,23,376	0/1:16,0:16:1.29:1,0,130	0/0:22,2:25:53.90:0,54,498	0/0:13,1:15:13.28:0,13,246	1/1:2,11:15:33.89:231,34,0	1/1:6,18:26:28.64:355,29,0	0/0:21,0:22:41.22:0,41,426	0/0:9,2:11:7.74:0,8,205	1/1:1,9:10:26.59:185,27,0	1/1:2,16:22:49.84:330,50,0	1/1:1,6:7:17.89:131,18,0	0/0:14,0:14:36.05:0,36,346	0/0:15,1:16:2.03:0,2,163	0/0:5,0:5:15.02:0,15,146	0/0:7,0:8:17.86:0,18,160	0/0:17,0:17:36.50:0,37,344	1/1:4,18:24:57.73:405,58,0	0/1:8,1:9:0.89:1,0,148
chr10	50240867	.	C	CTCCA	8113.67	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-5.313;DP=705;FS=5.400;HRun=0;HaplotypeScore=125.7146;InbreedingCoeff=0.9993;MQ=83.88;MQ0=0;MQRankSum=-5.579;QD=59.22;ReadPosRankSum=1.288;VQSLOD=6.4887;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,114,2079	1/1:1,10:12:24.08:640,24,0	0/0:16,0:16:45.14:0,45,799	0/0:29,0:29:78.15:0,78,1346	0/0:23,0:23:48.13:0,48,807	1/1:4,19:24:54.19:1330,54,0	1/1:3,29:33:83.87:2130,84,0	0/0:29,0:29:47.63:0,48,818	1/1:2,20:22:57.19:1475,57,0	0/0:20,0:20:48.16:0,48,877	0/0:24,0:24:57.20:0,57,1055	0/0:34,0:34:90.29:0,90,1648	0/0:21,0:21:63.20:0,63,1144	0/0:24,0:24:72.25:0,72,1344	1/1:2,16:20:36.12:849,36,0	1/1:3,21:26:69.23:1690,69,0	0/0:34,0:34:93.32:0,93,1724	0/0:31,0:31:93.32:0,93,1736	0/0:16,0:16:42.14:0,42,775	0/0:26,0:26:57.15:0,57,989	0/0:41,0:41:99:0,108,1996	0/0:20,0:20:48.16:0,48,867	0/0:19,0:19:42.14:0,42,768	0/0:32,0:32:90.31:0,90,1671	0/0:16,0:16:36.12:0,36,663	0/0:29,0:29:81.28:0,81,1473	0/0:25,0:25:75.26:0,75,1379	0/0:10,0:10:27.07:0,27,462
chr10	50241850	.	T	TG	6624.34	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-0.989;DP=598;FS=3.893;HRun=7;HaplotypeScore=62.8982;InbreedingCoeff=0.9974;MQ=92.82;MQ0=0;MQRankSum=-2.601;QD=28.68;ReadPosRankSum=-0.018;VQSLOD=5.4850;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,105,1004	1/1:0,6:6:15.05:181,15,0	0/0:30,0:30:53.24:0,53,538	0/0:21,0:21:57.07:0,57,543	0/0:24,0:24:54.05:0,54,513	1/1:1,16:16:45.14:544,45,0	1/1:2,19:21:54.17:652,54,0	1/1:6,17:23:51.16:611,51,0	1/1:2,13:15:33.10:399,33,0	0/0:26,0:26:63.08:0,63,604	0/0:11,0:11:27.03:0,27,257	0/0:20,0:20:54.09:0,54,521	0/0:18,0:18:48.07:0,48,463	0/0:21,0:21:60.10:0,60,579	1/1:3,20:23:57.17:689,57,0	1/1:4,31:35:90.28:1087,90,0	0/0:32,0:32:93.13:0,93,891	0/0:17,0:17:45.03:0,45,426	1/1:4,25:29:78.10:879,78,0	1/1:5,18:22:42.08:482,42,0	1/1:1,17:18:45.14:540,45,0	0/0:15,0:15:36.05:0,36,347	0/0:17,0:17:48.08:0,48,463	0/0:19,0:19:54.08:0,54,521	0/0:20,0:20:54.08:0,54,521	0/0:25,0:25:72.11:0,72,694	1/1:4,17:20:48.11:560,48,0	0/0:10,0:11:29.04:0,29,258
chr10	50242928	.	TAGCAGCAGCAGCAGCAGCAGCAGC	T	2919.46	PASS	AC=10;AF=0.385;AN=26;BaseQRankSum=4.821;DP=476;FS=0.987;HRun=0;HaplotypeScore=269.0765;InbreedingCoeff=0.7636;MQ=75.90;MQ0=6;MQRankSum=-5.355;QD=30.73;ReadPosRankSum=-0.020;VQSLOD=2.1261;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	0/0:22,0:20:3.90:0,4,50	./.	./.	1/1:15,0:15:3.01:67,3,0	./.	1/1:11,7:18:9.03:561,9,0	./.	./.	0/0:9,0:20:24.08:0,24,1406	0/0:12,0:19:30.10:0,30,1616	0/0:30,0:30:54.16:0,54,4687	1/1:9,11:20:21.07:1310,21,0	1/1:15,10:25:15.05:936,15,0	0/0:32,0:31:63.19:0,63,5551	0/0:32,0:32:69.24:0,69,6521	./.	./.	./.	./.	./.	0/0:23,0:28:34.31:0,34,1912	./.	./.	1/1:15,0:17:3.01:168,3,0	0/0:6,0:5:3.01:0,3,65
chr10	50242947	.	AG	A	219.41	PASS	AC=10;AF=0.200;AN=50;BaseQRankSum=6.171;DP=330;FS=5.305;HRun=1;HaplotypeScore=61.8353;InbreedingCoeff=0.6665;MQ=57.96;MQ0=20;MQRankSum=-3.145;QD=7.31;ReadPosRankSum=0.181;VQSLOD=0.6968;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:8:21.06:0,21,274	0/0:1,0:1:3.01:0,3,43	0/0:12,0:4:9.03:0,9,116	0/0:14,0:10:25.23:0,25,361	./.	0/0:6,0:6:18.05:0,18,237	0/0:11,0:11:17.09:0,17,218	1/1:2,0:2:6.01:69,6,0	0/0:14,0:14:3.74:0,4,157	0/0:6,0:4:9.03:0,9,127	0/0:3,0:3:6.01:0,6,68	0/0:26,0:26:44.81:0,45,567	0/0:21,0:21:35.75:0,36,418	0/0:34,0:34:99:0,102,1516	1/1:16,0:16:12.72:32,13,0	0/0:20,0:20:1.25:0,1,191	0/0:35,0:35:99:0,105,1549	0/0:30,0:30:90.31:0,90,1376	./.	1/1:0,6:6:12.04:167,12,0	1/1:1,3:3:6.02:84,6,0	./.	0/0:6,0:5:6.02:0,6,85	0/0:27,0:27:41.40:0,41,542	0/0:7,0:6:15.04:0,15,196	0/0:7,0:4:12.02:0,12,138	1/1:2,0:2:2.37:8,2,0	0/0:3,0:2:6.02:0,6,85
chr10	50243792	.	TCATGCAAA	T	4349.44	PASS	AC=46;AF=0.958;AN=48;BaseQRankSum=2.356;DP=87;FS=0.000;HRun=0;HaplotypeScore=118.9574;InbreedingCoeff=0.1626;MQ=54.92;MQ0=0;MQRankSum=-0.390;QD=54.37;ReadPosRankSum=2.388;VQSLOD=4.7273;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	1/1:0,2:2:6.02:131,6,0	./.	0/0:5,0:3:2.97:0,3,20	1/1:0,3:3:9.03:154,9,0	1/1:0,2:2:6.02:68,6,0	./.	./.	1/1:0,6:6:18.06:288,18,0	1/1:0,1:1:3.01:82,3,0	1/1:0,2:2:6.02:100,6,0	1/1:1,3:4:12.04:258,12,0	1/1:0,5:6:18.06:450,18,0	1/1:1,4:5:15.05:242,15,0	1/1:1,7:8:24.08:397,24,0	1/1:0,7:7:21.07:375,21,0	1/1:1,0:1:3:26,3,0	1/1:2,0:2:3.01:52,3,0	1/1:1,1:2:6.02:139,6,0	1/1:0,4:4:12.04:240,12,0	1/1:2,1:3:6.02:106,6,0	1/1:0,1:1:3.01:50,3,0	1/1:0,2:2:6.02:104,6,0	1/1:1,2:3:3.91:128,4,0	1/1:1,3:4:12.04:197,12,0	1/1:0,1:1:3.01:80,3,0	1/1:3,3:6:18.04:341,18,0	1/1:2,3:5:15.01:343,15,0
chr10	50243802	.	GAGATATAATGAT	G	2134.94	PASS	AB=0.674;AC=35;AF=0.673;AN=52;BaseQRankSum=3.966;DP=120;FS=9.685;HRun=0;HaplotypeScore=133.9791;InbreedingCoeff=0.1773;MQ=58.52;MQ0=0;MQRankSum=-1.942;QD=20.73;ReadPosRankSum=4.087;VQSLOD=1.4142;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:4:3.01:0,3,43	1/1:2,0:2:3.01:71,3,0	0/0:5,0:2:5.51:0,6,62	0/1:12,0:7:18.93:19,0,40	1/1:0,3:3:0.47:1,0,0	./.	0/0:2,0:2:0.89:0,1,2	./.	1/1:7,0:7:3.90:69,4,0	0/1:1,1:2:31.83:96,0,32	0/1:0,2:2:0:0,0,0	1/1:3,1:4:6.02:166,6,0	1/1:7,2:9:21.88:377,22,0	1/1:5,1:6:3.01:45,3,0	1/1:8,0:8:3.48:80,3,0	1/1:11,0:11:14.39:262,14,0	0/0:1,0:1:2.92:0,3,17	1/1:2,0:2:3.01:30,3,0	1/1:2,0:2:6.02:116,6,0	1/1:1,3:4:3.01:97,3,0	1/1:2,1:3:3.01:68,3,0	0/1:0,1:1:0:0,0,0	0/0:1,2:3:0.42:0,0,1	1/1:3,1:4:2.55:35,3,0	0/1:2,2:4:0:0,0,0	0/1:2,1:3:78.86:91,0,79	0/1:4,3:7:3.13:292,0,3	1/1:2,3:5:12.04:344,12,0
chr10	50243804	.	GAT	G	677.70	PASS	AB=0.957;AC=43;AF=0.796;AN=54;BaseQRankSum=1.615;DP=124;FS=2.520;HRun=0;HaplotypeScore=124.8388;InbreedingCoeff=0.2161;MQ=61.93;MQ0=0;MQRankSum=-0.977;QD=5.74;ReadPosRankSum=0.897;VQSLOD=2.9535;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:4:2.99:24,3,0	1/1:1,1:2:3.01:32,3,0	0/1:5,0:2:5.41:32,0,5	0/1:16,0:8:4.04:4,0,22	0/1:3,0:3:0:0,0,0	0/1:1,1:2:0:0,0,0	0/1:2,0:2:0:0,0,0	./.	1/1:4,3:7:3.01:32,3,0	1/1:2,0:2:6:53,6,0	0/1:2,0:2:0:0,0,0	1/1:4,0:4:5.77:30,6,0	1/1:9,0:9:10.49:72,10,0	0/0:5,0:6:0.84:0,1,2	1/1:3,5:8:3.01:30,3,0	1/1:5,6:11:15.13:114,15,0	1/1:1,0:1:2.84:14,3,0	1/1:2,0:2:2.94:18,3,0	1/1:2,0:2:5.93:48,6,0	1/1:4,0:4:3:27,3,0	1/1:3,0:3:0.47:1,0,0	0/1:1,0:1:0:0,0,0	0/1:3,0:3:0:0,0,0	1/1:4,0:4:2.69:16,3,0	0/1:4,0:4:0:0,0,0	1/1:3,0:3:8.45:52,8,0	1/1:7,0:7:0.61:66,1,0	1/1:5,0:5:11.97:99,12,0
chr10	50243807	.	ATAAT	A	1338.91	PASS	AB=1.000;AC=39;AF=0.886;AN=44;BaseQRankSum=3.640;DP=127;FS=0.000;HRun=0;HaplotypeScore=124.0288;InbreedingCoeff=0.1348;MQ=61.16;MQ0=0;MQRankSum=0.584;QD=12.51;ReadPosRankSum=4.037;VQSLOD=2.7053;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,2:4:2.99:23,3,0	1/1:1,0:2:3.01:32,3,0	0/0:6,0:2:3.31:0,3,15	0/1:19,0:8:6.29:6,0,52	./.	./.	0/0:2,0:2:0.89:0,1,2	./.	1/1:4,0:7:3.01:48,3,0	1/1:2,0:2:6.02:71,6,0	./.	1/1:2,0:4:6.02:87,6,0	1/1:8,0:9:23.06:254,23,0	1/1:2,2:6:2.88:15,3,0	1/1:5,1:8:3.01:31,3,0	1/1:10,0:11:12.67:104,13,0	1/1:0,1:1:3.01:62,3,0	1/1:0,2:2:3.01:59,3,0	1/1:0,1:2:6.02:106,6,0	1/1:3,0:4:3.01:45,3,0	1/1:3,0:3:2.92:17,3,0	./.	1/1:3,0:3:2.96:19,3,0	1/1:4,0:4:2.61:48,3,0	./.	1/1:3,0:3:8.76:86,9,0	1/1:6,1:7:17.03:164,17,0	1/1:4,0:4:12.04:157,12,0
chr10	50243816	.	GACATAT	G	1487.39	PASS	AB=0.933;AC=41;AF=0.732;AN=56;BaseQRankSum=3.539;DP=211;FS=1.355;HRun=0;HaplotypeScore=146.7003;InbreedingCoeff=0.1674;MQ=53.55;MQ0=1;MQRankSum=-0.471;QD=8.45;ReadPosRankSum=3.099;VQSLOD=2.6818;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:1.25:0,1,6	1/1:0,1:2:3.01:59,3,0	0/0:12,0:4:9.03:0,9,145	0/1:24,0:8:18.91:19,0,43	1/1:8,0:7:2.99:23,3,0	0/1:2,1:3:0:0,0,0	0/0:5,0:5:0.94:0,1,2	0/0:4,0:2:5.88:0,6,52	1/1:7,1:10:3.01:53,3,0	0/1:3,0:3:16.26:47,0,16	0/0:5,0:4:0.26:0,0,0	1/1:6,1:5:6.02:99,6,0	1/1:15,0:15:5.66:274,6,0	1/1:11,0:10:2.12:6,2,0	1/1:11,1:14:3.01:52,3,0	1/1:7,3:12:17.67:205,18,0	1/1:2,0:2:2.94:18,3,0	1/1:5,0:4:5.49:50,5,0	0/1:4,0:4:13.29:70,0,13	1/1:5,1:6:5.95:71,6,0	1/1:3,0:3:2.99:24,3,0	1/1:3,0:3:2.51:7,3,0	1/1:8,0:7:8.89:63,9,0	1/1:8,0:7:2.02:47,2,0	1/1:6,0:6:1.72:4,2,0	0/1:4,0:4:30.10:42,0,30	1/1:11,0:11:18.54:191,19,0	1/1:5,0:4:12.04:196,12,0
chr10	50243896	.	A	AGG	8144.66	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-6.197;DP=530;FS=13.053;HRun=5;HaplotypeScore=76.6765;InbreedingCoeff=0.9896;MQ=71.53;MQ0=1;MQRankSum=-5.080;QD=39.35;ReadPosRankSum=-0.381;VQSLOD=3.2524;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:75.24:0,75,951	1/1:1,4:5:9.03:157,9,0	0/0:13,0:13:26.17:0,26,335	0/0:27,0:27:48.94:0,49,618	0/0:26,0:26:66.18:0,66,812	1/1:0,20:21:60.21:1048,60,0	1/1:5,7:12:18.06:315,18,0	1/1:4,20:26:60.09:926,60,0	1/1:1,14:15:42.14:734,42,0	0/0:14,0:14:39.07:0,39,464	0/0:9,0:9:24.08:0,24,305	0/0:23,0:23:60.18:0,60,762	0/0:24,0:24:60.18:0,60,758	0/0:21,0:21:51.16:0,51,646	1/1:3,26:29:75.26:1311,75,0	1/1:1,24:27:27.88:1062,28,0	0/0:24,0:24:69.17:0,69,846	0/0:17,0:17:42.11:0,42,521	1/1:2,12:14:35.98:563,36,0	1/1:1,12:14:33.03:512,33,0	1/1:4,16:21:48.16:836,48,0	0/0:10,0:10:30.10:0,30,382	0/0:13,0:13:30.09:0,30,382	0/0:20,0:20:51.11:0,51,605	0/0:19,0:19:51.16:0,51,650	0/0:25,0:25:72.23:0,72,915	1/1:4,17:22:39.13:682,39,0	0/0:11,0:11:33.06:0,33,375
chr10	50245280	.	A	AC	10451	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-17.607;DP=688;FS=0.605;HRun=1;HaplotypeScore=70.1457;InbreedingCoeff=0.9996;MQ=84.96;MQ0=0;MQRankSum=-3.673;QD=40.51;ReadPosRankSum=1.775;VQSLOD=5.4528;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,153,1981	1/1:0,11:11:30.10:450,30,0	0/0:26,0:26:71.99:0,72,833	0/0:32,0:31:59.43:0,59,903	0/0:17,0:17:48.14:0,48,608	1/1:0,23:23:63.21:944,63,0	1/1:1,28:29:78.26:1169,78,0	1/1:3,29:32:87.25:1239,87,0	1/1:1,19:20:51.17:764,51,0	0/0:17,0:17:51.16:0,51,649	0/0:11,0:11:33.11:0,33,429	0/0:31,0:31:93.29:0,93,1191	0/0:33,0:33:93.28:0,93,1190	0/0:25,0:25:72.22:0,72,920	1/1:0,23:23:66.22:989,66,0	1/1:0,20:20:51.17:764,51,0	0/0:39,0:39:99:0,117,1499	0/0:24,0:24:69.21:0,69,881	1/1:0,18:18:51.17:761,51,0	1/1:0,19:19:51.17:764,51,0	1/1:0,34:34:96.33:1437,96,0	0/0:22,0:22:60.19:0,60,778	0/0:13,0:13:39.13:0,39,506	0/0:26,0:26:75.23:0,75,959	0/0:29,0:29:87.28:0,87,1129	0/0:22,0:22:60.17:0,60,750	1/1:1,28:29:78.26:1169,78,0	0/0:8,0:8:24.08:0,24,311
chr10	50245809	.	T	TG	856.24	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=4.731;DP=571;FS=0.511;HRun=2;HaplotypeScore=81.3438;InbreedingCoeff=0.8076;MQ=71.35;MQ0=3;MQRankSum=-3.517;QD=9.11;ReadPosRankSum=-4.414;VQSLOD=-0.4044;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:69.17:0,69,804	0/0:7,0:7:10.79:0,11,81	0/0:23,0:15:34.91:0,35,334	0/1:20,0:15:0.38:0,0,229	0/0:29,0:29:87.24:0,87,1047	0/0:25,0:25:9.33:0,9,193	0/0:12,0:12:24.27:0,24,208	1/1:5,25:28:55.39:413,55,0	0/0:15,0:15:4.84:0,5,106	0/0:23,0:23:69.21:0,69,845	0/0:22,0:22:66.16:0,66,786	0/0:24,0:24:48.14:0,48,580	0/0:21,0:21:45.04:0,45,503	0/0:19,0:19:51.15:0,51,621	0/0:17,0:17:16.57:0,17,192	0/0:20,0:20:9.72:0,10,123	0/0:23,0:23:66.21:0,66,815	0/0:24,0:24:63.17:0,63,770	1/1:24,0:24:50.02:411,50,0	1/1:1,13:14:17.63:121,18,0	1/1:6,0:6:8.92:63,9,0	0/0:15,0:15:42.12:0,42,503	0/0:19,0:18:40.86:0,41,486	0/0:20,0:20:57.08:0,57,665	0/0:28,0:28:75.20:0,75,902	0/0:25,0:25:72.23:0,72,893	0/0:5,18:23:1.55:0,2,4	0/0:18,0:18:54.17:0,54,669
chr10	50245816	.	G	GTT	2836.30	PASS	AB=1.000;AC=28;AF=0.500;AN=56;BaseQRankSum=3.456;DP=597;FS=8.884;HRun=11;HaplotypeScore=89.2583;InbreedingCoeff=0.6317;MQ=68.25;MQ0=4;MQRankSum=-0.726;QD=8.92;ReadPosRankSum=-4.990;VQSLOD=-0.0563;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:19:41.11:0,41,400	0/1:7,0:7:9.02:13,0,9	0/0:22,0:15:22.89:0,23,164	0/0:17,0:14:4.35:0,4,133	0/0:27,0:31:61.16:0,61,617	1/1:26,0:26:5.45:283,5,0	0/1:16,0:16:13.49:126,0,13	1/1:34,0:32:21.50:177,22,0	1/1:18,0:18:12.83:67,13,0	0/0:22,0:24:47.63:0,48,491	0/0:20,0:22:37.73:0,38,441	1/1:5,19:25:6.64:414,7,0	1/1:4,15:20:30.10:420,30,0	0/0:17,0:19:32.89:0,33,356	0/1:19,0:19:20.92:21,0,24	0/1:20,0:20:11.35:48,0,11	0/0:20,0:24:29.78:0,30,489	0/0:25,0:25:47.37:0,47,464	1/1:25,0:25:12.19:110,12,0	1/1:20,0:19:6.90:74,7,0	1/1:4,0:4:3.01:33,3,0	1/1:3,10:14:20.97:241,21,0	1/1:3,17:22:38.45:481,38,0	1/1:6,14:19:33.11:478,33,0	0/0:23,0:28:44.59:0,45,568	0/0:25,0:26:77.86:0,78,735	1/1:27,0:27:8.54:59,9,0	0/0:18,0:19:38.95:0,39,422
chr10	50246645	.	CGTGT	C	1086.97	PASS	AC=24;AF=0.522;AN=46;BaseQRankSum=8.765;DP=547;FS=0.000;HRun=0;HaplotypeScore=138.7612;InbreedingCoeff=0.7859;MQ=63.44;MQ0=12;MQRankSum=-5.647;QD=5.55;ReadPosRankSum=3.492;VQSLOD=2.1599;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:28:3.95:0,4,47	1/1:11,0:11:18.02:167,18,0	./.	./.	0/0:20,0:25:41.60:0,42,763	1/1:21,0:21:5.80:41,6,0	./.	./.	1/1:17,0:17:3:27,3,0	0/0:13,0:13:18.06:0,18,387	0/0:14,0:14:23.82:0,24,461	1/1:9,7:14:12.04:189,12,0	1/1:6,2:10:9.02:123,9,0	0/0:19,0:19:26.81:0,27,483	1/1:9,0:8:3:28,3,0	1/1:16,0:16:14.39:120,14,0	0/0:37,0:45:48.44:0,48,1864	0/0:41,0:43:83.95:0,84,1662	1/1:19,0:17:4.28:54,4,0	1/1:22,0:22:12.01:111,12,0	0/0:25,0:23:0:0,0,0	./.	1/1:9,5:13:6.02:95,6,0	1/1:15,10:25:8.61:142,9,0	0/0:22,0:21:22.35:0,22,388	0/0:19,0:19:30.03:0,30,594	1/1:16,0:16:18.02:167,18,0	0/0:10,0:10:12.93:0,13,254
chr10	50246663	.	TGTGTGTGTGTGTGTGTGTGTGC	T	5717.42	PASS	AB=0.846;AC=19;AF=0.339;AN=56;BaseQRankSum=10.725;DP=526;FS=4.963;HRun=0;HaplotypeScore=231.1300;InbreedingCoeff=0.6545;MQ=50.83;MQ0=18;MQRankSum=-7.074;QD=33.24;ReadPosRankSum=0.399;VQSLOD=3.2999;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:24:7.20:0,7,426	1/1:1,9:10:18.06:1105,18,0	0/1:12,0:2:5.98:6,0,52	0/0:17,0:5:11.97:0,12,211	0/0:24,0:24:63.22:0,63,4193	1/1:0,20:20:3.02:348,3,0	1/1:11,0:11:8.98:76,9,0	0/1:15,0:15:14.14:288,0,14	1/1:1,12:13:3.01:182,3,0	0/0:9,0:9:27.09:0,27,1962	0/0:15,0:14:42.14:0,42,2769	0/0:15,0:13:27.09:0,27,1130	0/0:11,0:11:19:0,19,1049	0/0:16,0:16:43.03:0,43,2698	1/1:0,11:11:3.01:184,3,0	1/1:2,15:17:15.05:897,15,0	0/0:50,0:50:99:0,124,10353	0/0:41,0:40:99:0,108,8762	1/1:5,21:22:54.68:836,55,0	1/1:2,13:14:12.04:736,12,0	0/0:7,19:23:1.81:0,2,17	0/0:11,0:11:15.05:0,15,285	0/0:11,0:10:18.06:0,18,736	0/0:26,0:26:24.73:0,25,992	0/0:23,0:21:60.21:0,60,3130	0/0:19,0:19:57.20:0,57,3388	0/1:3,19:22:2.59:1059,0,3	0/0:14,0:14:42.13:0,42,1957
chr10	50246940	.	CA	C	2961.26	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=11.038;DP=492;FS=0.402;HRun=8;HaplotypeScore=49.0137;InbreedingCoeff=0.9960;MQ=75.22;MQ0=0;MQRankSum=0.964;QD=24.68;ReadPosRankSum=-1.945;VQSLOD=3.5117;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:36.07:0,36,418	0/0:9,0:9:27.01:0,27,294	0/0:11,0:11:21.95:0,22,248	0/0:14,0:14:16.87:0,17,258	0/0:23,0:23:66.20:0,66,797	0/0:19,0:18:45.12:0,45,531	0/0:10,0:10:30.09:0,30,362	1/1:5,25:30:75.09:712,75,0	0/0:13,0:13:36.11:0,36,434	0/0:17,0:17:51.16:0,51,616	0/0:12,0:12:33.10:0,33,394	0/0:17,0:17:48.15:0,48,580	0/0:16,0:16:42.13:0,42,507	0/0:13,0:13:36.11:0,36,435	0/0:31,0:31:93.26:0,93,1102	0/0:15,0:16:48:0,48,547	0/0:24,0:24:51.16:0,51,616	0/0:18,0:18:48.15:0,48,580	1/1:3,14:17:39.03:368,39,0	1/1:2,25:27:75.12:724,75,0	1/1:0,17:17:51.08:493,51,0	0/0:17,0:17:48.14:0,48,570	0/0:20,0:20:54.17:0,54,651	0/0:11,0:11:33.10:0,33,399	0/0:12,0:12:30.09:0,30,362	0/0:25,0:25:72.20:0,72,850	1/1:0,29:29:87.14:840,87,0	0/0:11,0:11:33.09:0,33,387
chr10	50248411	.	TAGGGGA	T	977.32	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.965;DP=588;FS=21.208;HRun=0;HaplotypeScore=117.4131;InbreedingCoeff=0.9939;MQ=82.35;MQ0=0;MQRankSum=-6.601;QD=46.54;ReadPosRankSum=-1.327;VQSLOD=1.8871;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,20:21:45.15:1072,45,0	0/0:7,0:7:21.07:0,21,716	0/0:17,0:17:48.16:0,48,1694	0/0:15,0:15:45.12:0,45,1425	0/0:34,0:34:99:0,99,3532	0/0:27,0:27:75.26:0,75,2689	0/0:8,0:8:24.08:0,24,799	0/0:32,0:32:84.29:0,84,2884	0/0:14,0:14:42.14:0,42,1501	0/0:25,0:25:72.20:0,72,2445	0/0:24,0:24:72.25:0,72,2591	0/0:25,0:25:75.26:0,75,2614	0/0:25,0:25:72.23:0,72,2468	0/0:17,0:17:48.14:0,48,1469	0/0:24,0:24:72.25:0,72,2549	0/0:19,0:19:57.20:0,57,2038	0/0:22,0:22:66.23:0,66,2370	0/0:25,0:25:75.26:0,75,2577	0/0:22,0:22:60.21:0,60,2093	0/0:24,0:24:72.22:0,72,2343	0/0:17,0:17:51.18:0,51,1823	0/0:18,0:18:54.19:0,54,1932	0/0:20,0:20:60.21:0,60,2064	0/0:21,0:21:63.22:0,63,2231	0/0:21,0:21:63.22:0,63,2218	0/0:19,0:19:57.18:0,57,1888	0/0:28,0:28:84.29:0,84,2975	0/0:17,0:17:51.18:0,51,1819
chr10	50249084	.	A	AGG	1929.82	PASS	AB=0.954;AC=8;AF=0.143;AN=56;BaseQRankSum=11.308;DP=654;FS=3.669;HRun=3;HaplotypeScore=88.0295;InbreedingCoeff=0.3309;MQ=66.76;MQ0=3;MQRankSum=0.129;QD=13.69;ReadPosRankSum=3.221;VQSLOD=0.8737;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:75.16:0,75,950	1/1:7,0:7:17.96:148,18,0	0/0:45,0:27:42.80:0,43,610	0/0:39,0:23:19.44:0,19,276	0/0:27,0:27:75.16:0,75,930	0/1:31,2:32:99:431,0,153	0/1:22,1:23:53.69:230,0,54	0/0:22,0:22:44.18:0,44,729	0/1:19,1:20:99:264,0,103	0/0:26,0:26:71.77:0,72,890	0/0:23,0:23:63.12:0,63,771	0/0:20,0:20:54.16:0,54,724	0/0:24,0:24:72.19:0,72,947	0/0:19,0:19:56.21:0,56,723	1/1:31,2:33:2.20:638,2,0	0/1:24,1:25:50.68:356,0,51	0/0:28,0:28:77.99:0,78,924	0/0:15,0:15:42.10:0,42,564	0/0:11,0:11:29.59:0,30,298	0/0:25,0:25:72.21:0,72,954	0/0:16,0:16:42.09:0,42,563	0/0:22,0:22:65.96:0,66,759	0/0:19,0:19:27.54:0,28,595	0/0:30,0:30:80.97:0,81,932	0/0:18,0:18:48.08:0,48,584	0/0:20,0:20:54.16:0,54,740	0/0:25,0:25:63.13:0,63,821	0/0:13,0:13:39.10:0,39,522
chr10	50249814	.	TTCC	T	6833.28	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=12.874;DP=695;FS=0.000;HRun=0;HaplotypeScore=110.3104;InbreedingCoeff=0.9996;MQ=81.36;MQ0=0;MQRankSum=-5.479;QD=44.66;ReadPosRankSum=-0.443;VQSLOD=6.2984;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,123,2717	0/0:11,0:11:33.11:0,33,761	0/0:24,0:24:66.04:0,66,1237	0/0:21,0:21:60.01:0,60,1127	0/0:18,0:18:54.19:0,54,1174	0/0:27,0:27:78.25:0,78,1709	0/0:24,0:24:69.19:0,69,1369	1/1:0,26:26:78.24:1264,78,0	0/0:21,0:21:60.21:0,60,1383	0/0:21,0:21:63.17:0,63,1334	0/0:9,0:9:27.09:0,27,616	0/0:21,0:21:63.22:0,63,1426	0/0:26,0:26:78.25:0,78,1709	0/0:24,0:24:72.24:0,72,1590	0/0:32,0:32:96.33:0,96,2189	0/0:31,0:31:93.31:0,93,2028	0/0:33,0:33:86.52:0,87,2090	0/0:13,0:13:39.13:0,39,851	1/1:4,24:28:66.19:1042,66,0	1/1:0,15:15:42.14:711,42,0	1/1:0,40:40:99:1773,105,0	0/0:23,0:23:63.22:0,63,1429	0/0:20,0:20:60.21:0,60,1361	0/0:33,0:33:99:0,99,2234	0/0:32,0:32:96.32:0,96,2148	0/0:25,0:25:75.22:0,75,1600	1/1:1,43:44:99:2043,120,0	0/0:10,0:10:30.09:0,30,601
chr10	50250532	.	G	GA	6604.42	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=16.232;DP=850;FS=3.312;HRun=2;HaplotypeScore=93.6609;InbreedingCoeff=1.0000;MQ=77.47;MQ0=0;MQRankSum=-2.227;QD=37.10;ReadPosRankSum=4.227;VQSLOD=5.2814;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,120,1418	1/1:0,14:14:36.12:517,36,0	0/0:24,0:24:59.47:0,59,686	0/0:16,0:16:42.06:0,42,492	0/0:35,0:35:99:0,99,1162	1/1:0,22:22:57.19:820,57,0	1/1:3,36:39:96.32:1382,96,0	0/0:35,0:35:96.21:0,96,1080	1/1:0,25:25:66.22:950,66,0	0/0:39,0:39:99:0,105,1247	0/0:29,0:29:84.23:0,84,1014	0/0:28,0:28:81.21:0,81,965	0/0:33,0:32:96.26:0,96,1149	0/0:45,0:45:99:0,132,1622	1/1:1,39:40:99:1554,108,0	1/1:2,36:38:96.32:1381,96,0	0/0:31,0:31:90.28:0,90,1114	0/0:20,0:20:57.18:0,57,705	0/0:19,0:19:54.16:0,54,658	0/0:33,0:33:93.24:0,93,1101	0/0:36,0:36:99:0,99,1199	0/0:30,0:30:87.07:0,87,1000	0/0:26,0:26:69.17:0,69,820	0/0:25,0:25:66.16:0,66,778	0/0:28,0:28:81.21:0,81,976	0/0:38,0:38:99:0,108,1252	0/0:38,0:38:99:0,114,1359	0/0:23,0:23:63.15:0,63,731
chr10	50252698	.	AAT	A	6613.49	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=13.347;DP=749;FS=0.709;HRun=0;HaplotypeScore=99.7853;InbreedingCoeff=0.9990;MQ=78.18;MQ0=0;MQRankSum=-3.186;QD=43.80;ReadPosRankSum=-0.911;VQSLOD=5.5263;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,114,2315	0/0:14,0:14:42.13:0,42,817	0/0:16,0:16:48.16:0,48,925	0/0:17,0:17:42.14:0,42,822	0/0:36,0:36:99:0,108,2062	0/0:32,0:32:96.31:0,96,1882	0/0:21,0:21:63.20:0,63,1227	1/1:0,30:30:90.28:1417,90,0	0/0:17,0:17:51.17:0,51,1020	0/0:38,0:38:99:0,114,2238	0/0:25,0:25:75.26:0,75,1522	0/0:23,0:23:69.24:0,69,1388	0/0:32,0:32:96.30:0,96,1868	0/0:30,0:30:90.31:0,90,1809	0/0:30,0:30:90.28:0,90,1715	0/0:25,0:25:75.26:0,75,1474	0/0:25,0:25:75.26:0,75,1523	0/0:22,0:22:66.21:0,66,1290	1/1:0,13:13:39.13:612,39,0	1/1:0,40:40:96.22:1506,96,0	1/1:2,34:36:99:1710,108,0	0/0:26,0:26:78.25:0,78,1501	0/0:34,0:34:99:0,102,2036	0/0:23,0:23:69.24:0,69,1389	0/0:29,0:29:87.30:0,87,1755	0/0:38,0:38:99:0,111,2183	1/1:0,32:32:84.29:1369,84,0	0/0:7,0:7:21.03:0,21,386
chr10	50253723	.	CAGAAGCT	C	15516.35	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=18.415;DP=813;FS=0.000;HRun=0;HaplotypeScore=194.5450;InbreedingCoeff=0.9973;MQ=90.16;MQ0=0;MQRankSum=-18.723;QD=52.24;ReadPosRankSum=0.095;VQSLOD=4.5937;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,154,6095	1/1:2,10:12:27.09:677,27,0	0/0:40,0:39:98.65:0,99,3277	0/0:38,0:36:90.30:0,90,3099	0/0:25,0:25:72.23:0,72,2670	1/1:1,23:24:48.16:1232,48,0	1/1:6,18:24:45.15:1139,45,0	1/1:6,32:38:96.30:2240,96,0	1/1:4,19:23:42.14:1068,42,0	0/0:27,0:27:75.06:0,75,2849	0/0:23,0:23:69.24:0,69,2734	0/0:33,0:33:96.33:0,96,3663	0/0:37,0:37:99:0,108,3915	0/0:44,0:44:99:0,126,4785	1/1:5,44:49:99:2690,105,0	1/1:6,29:35:78.27:2025,78,0	0/0:34,0:34:99:0,102,3807	0/0:25,0:25:75.24:0,75,2759	1/1:4,9:13:24.08:623,24,0	1/1:4,23:27:54.19:1334,54,0	1/1:7,8:15:18.06:405,18,0	0/0:25,0:25:75.25:0,75,2862	0/0:23,0:23:66.23:0,66,2453	0/0:20,0:20:60.21:0,60,2373	0/0:39,0:39:99:0,114,4402	0/0:23,0:23:63.20:0,63,2334	1/1:4,33:37:81.28:2082,81,0	0/0:6,0:6:18.06:0,18,720
chr10	50254742	.	T	TCTCC	2843.92	PASS	AB=0.750;AC=11;AF=0.196;AN=56;BaseQRankSum=-9.610;DP=516;FS=2.880;HRun=0;HaplotypeScore=85.7469;InbreedingCoeff=0.8642;MQ=75.16;MQ0=1;MQRankSum=1.306;QD=29.94;ReadPosRankSum=1.329;VQSLOD=3.2948;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:48.14:0,48,775	1/1:0,3:3:3.01:44,3,0	0/0:23,0:20:23.16:0,23,331	0/0:23,0:23:23.53:0,24,310	0/0:15,0:15:33.08:0,33,522	1/1:7,13:21:36.12:890,36,0	0/1:8,4:12:5.12:210,0,5	0/0:31,0:31:39.09:0,39,559	1/1:4,14:19:27.09:667,27,0	0/0:24,0:24:45.15:0,45,725	0/0:12,0:12:24.08:0,24,401	0/0:25,0:25:60.20:0,60,976	0/0:26,0:26:54.13:0,54,801	0/0:21,0:21:51.17:0,51,843	1/1:9,11:21:33.11:816,33,0	1/1:7,10:18:18.02:388,18,0	0/0:13,0:13:27.09:0,27,445	0/0:15,0:15:36.12:0,36,600	0/0:18,0:18:36.98:0,37,534	0/0:14,0:14:30.03:0,30,439	0/0:24,0:24:54.16:0,54,864	0/0:13,0:13:30.97:0,31,472	0/0:11,0:11:24.08:0,24,389	0/0:26,0:26:60.18:0,60,938	0/0:17,0:17:36.08:0,36,567	0/0:18,0:18:42.14:0,42,680	0/0:17,0:17:45.15:0,45,749	0/0:11,0:11:12.04:0,12,201
chr10	50255757	.	G	GCCATGA	37754.79	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-5.834;DP=837;FS=10.905;HRun=0;HaplotypeScore=181.1109;InbreedingCoeff=0.9986;MQ=70.45;MQ0=0;MQRankSum=-20.180;QD=66.00;ReadPosRankSum=-1.611;VQSLOD=4.3544;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:17,33:55:84.28:2651,84,0	1/1:3,12:19:39.13:1335,39,0	0/0:15,0:15:33.11:0,33,581	0/0:27,0:26:68.22:0,68,1423	0/0:25,0:25:69.22:0,69,1564	1/1:8,18:28:54.18:1833,54,0	1/1:4,25:32:72.25:2461,72,0	1/1:17,20:41:99:3497,111,0	1/1:3,19:24:63.22:2207,63,0	0/0:24,0:24:63.22:0,63,1439	0/0:15,0:15:42.14:0,42,966	1/1:8,34:48:99:3482,102,0	1/1:9,38:50:99:4002,114,0	0/0:47,0:47:99:0,138,3006	1/1:11,38:53:99:4072,123,0	1/1:4,29:36:75.26:2581,75,0	0/0:34,0:34:99:0,102,2266	0/0:20,0:20:54.19:0,54,1254	1/1:15,11:28:72.21:2124,72,0	1/1:7,15:26:33.11:1078,33,0	1/1:8,20:32:36.12:1267,36,0	1/1:7,19:28:63.22:2200,63,0	1/1:3,17:24:27.09:879,27,0	1/1:2,20:27:20.89:739,21,0	0/0:20,0:19:57.17:0,57,1238	0/0:31,0:31:81.27:0,81,1841	1/1:6,12:19:39.13:1348,39,0	0/0:7,0:7:21.07:0,21,480
chr10	50256052	.	TG	T	861.03	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.888;DP=672;FS=0.000;HRun=8;HaplotypeScore=75.1356;InbreedingCoeff=0.9936;MQ=78.56;MQ0=0;MQRankSum=-0.248;QD=22.08;ReadPosRankSum=0.239;VQSLOD=3.8663;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,36:39:99:956,99,0	0/0:12,0:12:30.09:0,30,362	0/0:23,0:23:57.17:0,57,679	0/0:17,0:17:34.84:0,35,394	0/0:24,0:24:51.09:0,51,585	0/0:16,0:16:42.12:0,42,496	0/0:22,0:22:57.14:0,57,654	0/0:27,0:27:66.17:0,66,782	0/0:27,0:27:78.22:0,78,920	0/0:38,1:39:67.39:0,67,1094	0/0:10,0:10:30.05:0,30,346	0/0:42,0:42:99:0,102,1229	0/0:23,0:23:57.15:0,57,665	0/0:32,0:32:84.25:0,84,1000	0/0:31,0:31:75.22:0,75,893	0/0:32,1:33:58.31:0,58,985	0/0:15,0:15:42.13:0,42,507	0/0:27,0:27:78.23:0,78,929	0/0:20,0:20:48.14:0,48,567	0/0:15,0:15:36.11:0,36,433	0/0:34,0:34:96.24:0,96,1132	0/0:20,0:20:39.08:0,39,454	0/0:15,0:15:36.11:0,36,432	0/0:27,2:29:20.28:0,20,812	0/0:22,0:22:51.16:0,51,613	0/0:19,0:19:54.15:0,54,640	0/0:20,0:20:39.12:0,39,471	0/0:19,0:19:57.17:0,57,689
chr10	50257992	.	TAATTTATAATGTCCTAG	T	4647.60	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=9.995;DP=679;FS=33.800;HRun=0;HaplotypeScore=304.5379;InbreedingCoeff=0.9691;MQ=65.08;MQ0=0;MQRankSum=-6.978;QD=91.13;ReadPosRankSum=0.723;VQSLOD=3.4333;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:90.28:0,90,6761	0/0:13,0:13:39.13:0,39,3191	0/0:12,0:12:36.08:0,36,1095	0/0:7,0:7:10.22:0,10,384	0/0:34,0:34:99:0,102,7750	0/0:32,0:32:96.24:0,96,6764	0/0:17,0:17:51.17:0,51,3411	1/1:3,15:18:45.10:1708,45,0	0/0:25,0:25:72.19:0,72,5325	0/0:38,0:38:99:0,114,8496	0/0:22,0:22:63.22:0,63,4960	0/0:34,0:34:99:0,99,7296	0/0:34,0:34:96.32:0,96,7431	0/0:28,0:28:84.29:0,84,6206	0/0:42,0:42:99:0,126,8946	0/0:23,0:23:69.24:0,69,5451	0/0:32,0:31:93.30:0,93,6539	0/0:21,0:21:60.19:0,60,3812	1/1:2,3:5:9.02:323,9,0	1/1:1,10:11:21.07:979,21,0	1/1:1,5:6:15.05:744,15,0	0/0:29,0:29:87.23:0,87,6012	0/0:31,0:31:93.28:0,93,6329	0/0:14,0:14:42.14:0,42,3509	0/0:38,0:38:99:0,108,7806	0/0:40,0:40:99:0,111,7924	1/1:5,6:11:18.06:894,18,0	0/0:32,0:32:96.24:0,96,6304
chr10	50361044	.	T	TG	8681.22	PASS	AB=0.969;AC=48;AF=0.857;AN=56;BaseQRankSum=7.561;DP=562;FS=5.967;HRun=3;HaplotypeScore=245.3330;InbreedingCoeff=-0.1592;MQ=59.29;MQ0=0;MQRankSum=-4.274;QD=15.45;ReadPosRankSum=11.825;VQSLOD=2.7691;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:22:40.89:347,41,0	1/1:9,0:9:26.87:203,27,0	0/1:8,4:12:31.71:82,0,32	0/1:9,0:9:19.69:20,0,20	1/1:38,0:38:37.46:534,37,0	1/1:20,0:20:45.07:330,45,0	1/1:19,0:19:17.02:250,17,0	0/1:18,0:18:23.53:170,0,24	1/1:21,0:21:33.01:412,33,0	1/1:19,0:18:15.83:331,16,0	1/1:16,0:16:14.31:258,14,0	1/1:31,0:31:11.26:483,11,0	1/1:26,0:26:28.79:467,29,0	1/1:19,0:19:23.75:325,24,0	1/1:25,0:25:45.60:488,46,0	1/1:31,0:31:47.69:588,48,0	0/1:11,0:11:56.78:60,0,57	1/1:16,0:16:18.16:256,18,0	0/1:17,0:17:2.86:202,0,3	1/1:23,0:23:52.18:393,52,0	0/1:9,0:9:18.19:35,0,18	1/1:21,0:21:31.09:380,31,0	1/1:32,0:32:18.65:517,19,0	0/1:14,0:14:7.04:150,0,7	1/1:19,0:19:29.67:349,30,0	1/1:31,0:31:19.79:539,20,0	1/1:27,0:25:2.64:420,3,0	0/1:6,0:6:5.92:94,0,6
chr10	50361381	.	AT	A	2944.41	PASS	AB=0.875;AC=23;AF=0.411;AN=56;BaseQRankSum=3.077;DP=557;FS=0.796;HRun=13;HaplotypeScore=65.3500;InbreedingCoeff=0.8832;MQ=66.23;MQ0=2;MQRankSum=2.129;QD=11.59;ReadPosRankSum=3.293;VQSLOD=3.6028;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:14:16.47:0,16,74	1/1:1,5:6:14.91:109,15,0	0/0:26,0:17:16.76:0,17,115	0/0:15,1:11:10.66:0,11,136	0/0:28,4:32:7.29:0,7,390	1/1:8,16:24:18.35:299,18,0	1/1:4,6:11:19.92:137,20,0	1/1:10,23:33:62.55:458,63,0	1/1:4,17:21:21.51:321,22,0	0/0:28,1:30:47.02:0,47,597	0/1:18,3:21:14.72:15,0,333	0/0:22,0:22:57.07:0,57,542	0/0:19,1:23:38.76:0,39,344	0/0:10,0:11:32.88:0,33,300	1/1:10,23:34:35.44:414,35,0	1/1:4,18:22:38.74:284,39,0	0/0:10,0:11:26.87:0,27,242	0/0:19,0:19:39.06:0,39,379	1/1:6,8:15:20.08:172,20,0	1/1:4,24:28:33.49:408,33,0	1/1:2,4:6:5.96:44,6,0	0/0:14,1:16:16.99:0,17,313	0/0:16,0:16:36.06:0,36,348	0/0:10,0:10:15.02:0,15,146	0/0:17,0:18:43.51:0,44,373	0/0:28,0:28:57.07:0,57,545	1/1:6,27:33:68.47:503,68,0	0/0:10,0:10:21.02:0,21,198
chr10	50361383	.	T	TTA	201.91	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-1.177;DP=561;FS=4.447;HRun=0;HaplotypeScore=89.2955;InbreedingCoeff=0.9283;MQ=66.07;MQ0=2;MQRankSum=2.005;QD=12.62;ReadPosRankSum=-0.153;VQSLOD=3.1916;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,16:15:18.06:292,18,0	0/0:5,0:5:15.02:0,15,144	0/0:25,0:16:32.73:0,33,327	0/0:17,0:12:17.72:0,18,238	0/0:32,0:32:89.73:0,90,981	0/0:24,0:24:69.02:0,69,656	0/0:10,0:10:30.02:0,30,276	0/0:35,0:35:89.10:0,89,813	0/0:20,0:20:54.08:0,54,535	0/0:29,0:29:72.11:0,72,1032	0/0:21,0:21:59.93:0,60,708	0/0:22,0:22:63.18:0,63,871	0/0:22,0:22:59.48:0,59,714	0/0:11,0:11:32.89:0,33,452	0/0:33,0:33:87.08:0,87,834	0/0:22,0:22:47.55:0,48,434	0/0:10,0:10:29.90:0,30,377	0/0:19,0:19:51.13:0,51,692	0/0:16,0:16:17.08:0,17,367	0/0:30,0:30:71.79:0,72,682	0/0:6,0:6:12.01:0,12,112	0/0:16,0:16:44.93:0,45,584	0/0:17,0:17:48.08:0,48,627	0/0:11,0:11:30.05:0,30,354	0/0:18,0:18:47.66:0,48,583	0/0:27,0:27:75.15:0,75,981	0/0:33,0:33:81.01:0,81,753	0/0:14,0:14:29.99:0,30,364
chr10	50367283	.	CA	C	1783.22	PASS	AB=0.983;AC=43;AF=0.768;AN=56;BaseQRankSum=0.807;DP=234;FS=9.047;HRun=1;HaplotypeScore=57.0155;InbreedingCoeff=-0.1553;MQ=49.13;MQ0=0;MQRankSum=-2.879;QD=7.79;ReadPosRankSum=2.348;VQSLOD=0.4265;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:4:5.17:21,5,0	1/1:3,0:3:7.87:40,8,0	0/1:10,1:7:23.43:47,0,23	0/1:5,0:5:21.59:105,0,22	0/1:8,0:8:19.90:22,0,20	1/1:10,0:10:23.84:140,24,0	1/1:11,0:11:29.20:174,29,0	0/1:15,0:15:47.28:107,0,47	1/1:8,0:8:22.42:128,22,0	1/1:6,1:7:11.64:69,12,0	1/1:3,0:3:2.96:19,3,0	1/1:6,0:6:5.74:53,6,0	1/1:20,0:20:7.08:113,7,0	0/1:12,1:13:21.80:91,0,22	1/1:3,0:3:5.91:38,6,0	1/1:6,0:6:14.67:84,15,0	0/1:11,0:11:24.05:57,0,24	0/1:8,0:8:10.19:27,0,10	1/1:13,0:13:13.73:132,14,0	1/1:11,0:11:6.67:69,7,0	0/1:15,0:14:35.24:36,0,35	0/0:3,0:3:0.42:0,0,1	1/1:4,0:4:4.31:35,4,0	0/0:2,0:2:0.47:0,0,1	0/1:12,0:12:1.51:96,0,2	1/1:7,0:7:6.25:40,6,0	1/1:11,1:12:3.03:140,3,0	1/1:3,0:3:7.84:36,8,0
chr10	50368791	.	G	GTGT	75.42	PASS	AB=1.000;AC=5;AF=0.50;AN=10;BaseQRankSum=-0.358;DP=32;FS=0.000;HRun=0;HaplotypeScore=13.6246;MQ=50.06;MQ0=7;MQRankSum=0.358;QD=8.38;ReadPosRankSum=1.231;VQSLOD=1.7787;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	0/1:3,0:1:0:0,0,0	./.	./.	./.	./.	0/0:2,0:2:6.02:0,6,93	./.	./.	./.	./.	1/1:0,2:2:3.01:74,3,0	1/1:2,1:4:3.01:74,3,0	./.	./.	./.	./.	./.	./.	./.	./.	./.	0/0:1,0:1:3.01:0,3,38	./.	./.
chr10	50369218	.	TTG	T	138.91	PASS	AB=0.986;AC=19;AF=0.396;AN=48;BaseQRankSum=4.551;DP=352;FS=6.624;HRun=0;HaplotypeScore=59.2082;InbreedingCoeff=0.3476;MQ=36.80;MQ0=66;MQRankSum=-3.997;QD=1.04;ReadPosRankSum=-0.396;VQSLOD=0.6286;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:10,0:9:2.80:13,3,0	0/0:3,0:3:3:0,3,26	./.	./.	0/0:17,0:16:23.85:0,24,299	0/0:12,0:10:5.98:0,6,46	0/0:11,0:7:9:0,9,77	./.	0/0:10,0:8:3:0,3,26	0/1:11,1:12:10.21:10,0,205	0/0:14,0:14:26.52:0,27,335	1/1:12,0:9:10.21:42,10,0	0/1:11,0:12:3.05:33,0,3	0/0:19,3:20:7.96:0,8,459	0/0:12,0:11:21:0,21,181	0/0:12,0:12:9:0,9,78	0/0:24,3:22:0.05:0,0,406	0/0:18,3:18:1.20:0,1,330	1/1:11,0:6:8.04:33,8,0	1/1:14,0:13:13.08:55,13,0	./.	1/1:10,0:9:2.37:8,2,0	1/1:14,0:13:9.18:30,9,0	1/1:12,0:7:5.34:23,5,0	0/1:9,0:9:8.69:9,0,148	0/0:16,0:16:1.89:0,2,312	0/1:6,0:4:0:0,0,0	0/1:10,0:8:31.66:32,0,75
chr10	50369239	.	TGTGTGTGTGTGTGTGTGTG	T	368.17	PASS	AB=1.000;AC=13;AF=0.241;AN=54;BaseQRankSum=6.249;DP=420;FS=52.796;HRun=0;HaplotypeScore=134.2491;InbreedingCoeff=0.6359;MQ=42.37;MQ0=87;MQRankSum=-5.378;QD=3.72;ReadPosRankSum=1.527;VQSLOD=0.3553;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,9:12:6.02:272,6,0	0/0:3,0:2:3.01:0,3,233	0/0:14,0:5:14.98:0,15,224	0/0:22,0:5:12.04:0,12,366	0/0:21,0:20:38.66:0,39,2328	0/0:13,0:10:6.02:0,6,394	0/0:16,0:9:9.03:0,9,636	0/0:10,0:3:6.02:0,6,227	0/0:8,0:8:6.02:0,6,350	0/0:15,0:13:39.13:0,39,2761	0/0:15,0:14:36.08:0,36,2632	1/1:18,0:12:14.12:102,14,0	0/1:18,0:13:40.86:41,0,253	0/0:24,0:22:48.08:0,48,3357	0/0:15,0:13:18.74:0,19,1615	0/0:18,0:15:9.03:0,9,691	0/0:27,0:23:51.14:0,51,3199	0/0:20,0:18:45.15:0,45,3220	0/0:13,0:5:15.04:0,15,649	0/0:11,0:9:17.84:0,18,1029	./.	1/1:15,0:12:2.80:14,3,0	1/1:14,0:11:11.23:53,11,0	1/1:12,0:7:5.84:35,6,0	0/0:10,0:10:24.08:0,24,1849	0/0:22,0:22:63.19:0,63,3716	1/1:8,0:3:0.38:1,0,0	0/0:16,0:12:27.09:0,27,2032
chr10	50369257	.	TG	T	1168.94	PASS	AB=0.682;AC=33;AF=0.589;AN=56;BaseQRankSum=7.525;DP=498;FS=105.858;HRun=2;HaplotypeScore=60.4301;InbreedingCoeff=0.7351;MQ=52.35;MQ0=93;MQRankSum=-0.293;QD=4.79;ReadPosRankSum=1.792;VQSLOD=-0.5764;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:9:5.81:51,6,0	1/1:2,1:2:2.80:7,3,0	0/0:27,0:11:30.10:0,30,390	0/0:30,0:17:42.60:0,43,539	0/0:26,0:26:59.98:0,60,717	1/1:12,3:11:5.88:37,6,0	1/1:13,3:10:6.74:27,7,0	1/1:4,21:13:39.10:470,39,0	1/1:10,1:9:1.25:3,1,0	0/0:28,0:26:74.71:0,75,966	0/0:18,0:17:50.91:0,51,596	1/1:17,4:14:13.12:84,13,0	0/1:8,7:8:13.11:43,0,13	0/0:24,0:22:59.76:0,60,744	1/1:22,1:18:11.16:29,11,0	1/1:14,2:13:3.74:10,4,0	0/0:27,0:25:65.59:0,66,835	0/0:19,0:18:44.59:0,45,585	1/1:8,5:5:14.85:123,15,0	1/1:13,1:12:17.58:124,18,0	1/1:4,4:3:9.03:114,9,0	1/1:9,2:8:3.01:37,3,0	1/1:11,4:10:12.04:149,12,0	1/1:8,2:7:5.47:25,5,0	0/0:10,0:10:26.92:0,27,339	0/0:26,0:26:78.21:0,78,1037	1/1:12,4:8:2.96:38,3,0	0/0:19,0:17:51.08:0,51,598
chr10	50371639	.	CT	C	2520.92	PASS	AB=0.833;AC=13;AF=0.232;AN=56;BaseQRankSum=11.794;DP=709;FS=0.000;HRun=11;HaplotypeScore=94.0230;InbreedingCoeff=0.8956;MQ=65.04;MQ0=0;MQRankSum=1.363;QD=17.88;ReadPosRankSum=1.548;VQSLOD=4.1827;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:71.90:0,72,296	1/1:3,14:17:30.63:304,31,0	0/0:19,0:17:8.01:0,8,235	0/1:8,2:10:9.64:10,0,101	0/0:38,0:41:95.89:0,96,965	1/1:4,26:30:77.86:633,78,0	1/1:1,21:22:56.93:467,57,0	0/0:27,1:28:29.50:0,30,517	1/1:2,16:18:44.92:365,45,0	0/0:32,0:33:78.05:0,78,803	0/0:30,1:31:56.56:0,57,798	0/0:26,0:26:72.32:0,72,418	0/0:16,0:16:40.85:0,41,250	0/0:24,0:24:52.31:0,52,538	1/1:1,26:27:65.90:538,66,0	1/1:1,16:17:47.94:394,48,0	0/0:30,0:30:61.82:0,62,840	0/0:24,0:24:66.11:0,66,682	0/0:19,1:21:32.36:0,32,533	0/0:30,0:34:75.87:0,76,738	0/0:12,0:12:27.04:0,27,277	0/0:29,0:29:80.88:0,81,464	0/0:19,0:19:40.15:0,40,231	0/0:24,0:24:57.99:0,58,338	0/0:35,3:38:56.56:0,57,806	0/0:34,1:35:48.42:0,48,711	0/0:35,2:36:46.93:0,47,893	0/0:12,0:12:28.99:0,29,318
chr10	50371648	.	T	TG	3064.11	PASS	AB=1.000;AC=18;AF=0.321;AN=56;BaseQRankSum=8.796;DP=731;FS=9.567;HRun=0;HaplotypeScore=95.9877;InbreedingCoeff=0.6735;MQ=68.51;MQ0=0;MQRankSum=0.984;QD=10.98;ReadPosRankSum=1.681;VQSLOD=4.0855;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,31:32:80.48:1067,80,0	1/1:19,1:20:44.30:297,44,0	0/0:24,0:21:46.12:0,46,486	0/0:14,0:12:23.95:0,24,254	0/0:40,0:40:99:0,106,1367	1/1:27,0:27:73.73:368,74,0	1/1:23,0:23:60.72:333,61,0	0/0:27,0:27:77.53:0,78,917	1/1:20,0:20:51.65:281,52,0	0/0:33,0:33:95.67:0,96,1192	0/0:30,0:30:89.63:0,90,1162	0/1:28,0:28:33.31:33,0,40	0/0:16,0:16:18.90:0,19,52	0/0:23,0:23:69.11:0,69,799	1/1:28,0:28:68.57:357,69,0	1/1:21,0:21:57.99:333,58,0	0/0:32,0:32:96.23:0,96,1238	0/0:27,0:27:72.17:0,72,922	0/0:23,0:23:64.44:0,64,818	0/0:33,0:33:80.97:0,81,1076	0/0:13,0:13:36.04:0,36,427	0/1:31,0:31:27.44:27,0,47	0/1:20,0:20:18.72:56,0,19	0/1:29,0:29:20.17:115,0,20	0/0:33,0:33:96.20:0,96,1233	0/0:35,0:35:99:0,100,1217	0/0:37,0:36:99:0,102,1301	0/0:12,0:12:36.08:0,36,472
chr10	50372088	.	A	AT	5827.68	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-2.312;DP=621;FS=5.716;HRun=9;HaplotypeScore=79.7179;InbreedingCoeff=0.9814;MQ=66.13;MQ0=0;MQRankSum=-2.468;QD=26.49;ReadPosRankSum=2.120;VQSLOD=5.2266;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:74.97:0,75,647	1/1:3,10:13:7.26:246,7,0	0/0:12,0:11:10.82:0,11,141	0/0:9,0:9:19.46:0,19,138	0/0:40,0:40:98.96:0,99,857	1/1:4,19:23:48.13:531,48,0	1/1:2,23:25:60.16:664,60,0	0/0:31,0:31:83.96:0,84,723	1/1:1,14:15:39.11:431,39,0	0/0:28,0:28:77.98:0,78,676	0/0:30,0:30:74.94:0,75,643	1/1:4,11:15:39.11:431,39,0	1/1:4,17:21:57.13:620,57,0	0/0:27,0:27:71.98:0,72,625	1/1:3,20:23:54.15:597,54,0	1/1:2,23:25:63.17:697,63,0	0/0:25,0:26:71:0,71,599	0/0:19,0:19:47.97:0,48,417	0/0:27,0:27:71.91:0,72,610	0/0:33,0:33:92.95:0,93,803	0/0:15,0:15:35.98:0,36,312	1/1:4,13:17:45.11:490,45,0	1/1:4,23:27:74.69:804,75,0	1/1:4,12:16:30.04:316,30,0	0/0:15,0:15:41.99:0,42,365	0/0:21,0:21:50.96:0,51,439	0/0:26,0:26:71.99:0,72,625	0/0:16,0:16:47.99:0,48,416
chr10	50372126	.	A	AT	7235.93	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-8.649;DP=628;FS=3.835;HRun=6;HaplotypeScore=74.6444;InbreedingCoeff=0.9998;MQ=79.47;MQ0=0;MQRankSum=-3.387;QD=30.92;ReadPosRankSum=-1.986;VQSLOD=4.7120;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:53.44:0,53,512	0/0:12,0:12:33.07:0,33,336	0/0:13,0:13:32.96:0,33,320	0/0:19,0:19:44.91:0,45,411	0/0:29,0:29:78:0,78,778	0/0:22,0:22:57.11:0,57,574	0/0:23,0:23:63.14:0,63,643	1/1:4,34:38:96.28:1181,96,0	0/0:16,0:16:36.08:0,36,367	0/0:32,0:32:81.17:0,81,826	0/0:24,0:24:57.12:0,57,581	1/1:3,18:21:60.16:717,60,0	1/1:3,18:21:54.14:662,54,0	0/0:25,0:25:72.12:0,72,715	0/0:26,0:26:75.15:0,75,759	0/0:26,0:26:72.14:0,72,727	0/0:22,0:22:63.09:0,63,626	0/0:24,0:24:72.16:0,72,734	1/1:1,22:23:66.18:803,66,0	1/1:4,31:35:90.23:1110,90,0	1/1:0,16:16:45.14:566,45,0	1/1:2,14:16:33.11:415,33,0	1/1:5,17:22:50.86:608,51,0	1/1:1,17:18:45.01:532,45,0	0/0:20,0:20:57.13:0,57,581	0/0:26,0:26:72.15:0,72,729	1/1:4,20:24:51.16:642,51,0	0/0:14,0:14:36.08:0,36,367
chr10	50372874	.	G	GCT	10051.91	PASS	AB=0.601;AC=21;AF=0.375;AN=56;BaseQRankSum=9.368;DP=680;FS=0.000;HRun=0;HaplotypeScore=110.2179;InbreedingCoeff=0.8072;MQ=73.96;MQ0=0;MQRankSum=-3.865;QD=32.53;ReadPosRankSum=1.153;VQSLOD=6.7556;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,26:40:72.20:1137,72,0	1/1:0,9:10:24.08:389,24,0	0/0:27,0:27:43.20:0,43,490	0/0:31,0:25:28.22:0,28,437	0/0:21,0:22:60.02:0,60,710	1/1:2,21:23:60.20:969,60,0	0/1:11,17:27:48.88:798,0,49	1/1:10,17:28:55.40:831,55,0	0/1:5,17:23:0.23:810,0,0	0/0:28,0:28:69.21:0,69,843	0/0:21,0:21:51.16:0,51,623	0/0:19,0:19:42.12:0,42,501	0/0:25,0:25:54.17:0,54,660	0/0:15,0:16:38.94:0,39,441	1/1:4,16:20:45.15:730,45,0	1/1:5,20:25:54.18:876,54,0	0/0:32,0:34:49.41:0,49,876	0/0:15,0:15:36.11:0,36,438	1/1:9,20:29:60.20:970,60,0	1/1:3,20:23:23.53:888,24,0	0/1:10,16:26:58.91:630,0,59	0/0:14,0:14:36.11:0,36,440	0/0:21,0:21:51.16:0,51,623	0/0:23,0:23:57.15:0,57,670	0/0:35,0:35:87.27:0,87,1063	0/0:31,0:31:72.22:0,72,870	1/1:6,27:33:63.22:1022,63,0	0/0:7,0:7:15.05:0,15,183
chr10	50373228	.	CT	C	810.59	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.280;DP=556;FS=0.000;HRun=9;HaplotypeScore=54.3325;InbreedingCoeff=0.9479;MQ=79.55;MQ0=0;MQRankSum=-0.751;QD=21.91;ReadPosRankSum=0.912;VQSLOD=4.2663;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,35:37:99:905,99,0	0/0:13,0:13:18.32:0,18,332	0/0:19,1:20:23.54:0,24,488	0/0:16,0:16:20.27:0,20,241	0/0:25,0:25:66.18:0,66,751	0/0:15,0:15:42.11:0,42,470	0/0:17,0:17:42.12:0,42,485	0/0:26,0:27:66.01:0,66,726	0/0:14,0:14:42.12:0,42,485	0/0:22,0:24:69.02:0,69,766	0/0:24,1:25:38.72:0,39,690	0/0:18,0:18:48.14:0,48,554	0/0:17,0:17:48.12:0,48,541	0/0:21,0:21:54.16:0,54,623	0/0:14,0:14:39.11:0,39,450	0/0:15,0:15:42.11:0,42,475	0/0:39,0:39:99:0,111,1267	0/0:22,2:24:11.26:0,11,637	0/0:22,0:22:57.14:0,57,637	0/0:16,0:16:48.14:0,48,554	0/0:10,0:10:27.07:0,27,302	0/0:9,0:9:24.07:0,24,277	0/0:21,0:20:57.17:0,57,658	0/0:14,0:14:36.11:0,36,416	0/0:25,0:25:72.21:0,72,831	0/0:26,0:26:72.21:0,72,824	0/0:21,0:21:57.17:0,57,657	0/0:11,0:11:30.06:0,30,324
chr10	50374910	.	C	CCTCTCTCTCT	5319.36	PASS	AB=0.886;AC=34;AF=0.607;AN=56;BaseQRankSum=0.737;DP=705;FS=5.395;HRun=0;HaplotypeScore=212.0939;InbreedingCoeff=0.4961;MQ=68.56;MQ0=11;MQRankSum=-6.097;QD=10.11;ReadPosRankSum=-4.204;VQSLOD=2.6494;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:16,1:31:6.02:239,6,0	1/1:9,0:17:3.90:132,4,0	0/1:34,0:20:26.31:26,0,36	0/1:46,0:29:52.08:52,0,126	0/0:18,0:20:35.95:0,36,780	1/1:12,0:15:6.01:95,6,0	1/1:12,0:18:15.05:453,15,0	1/1:34,0:38:30.97:616,31,0	1/1:17,0:20:6.01:91,6,0	0/0:28,0:31:26.39:0,26,659	0/0:17,0:18:27.07:0,27,582	1/1:10,0:27:9.03:391,9,0	1/1:14,0:27:3.01:130,3,0	0/0:21,0:26:34.16:0,34,829	0/1:18,1:26:11.10:143,0,11	1/1:11,0:21:27.09:888,27,0	0/1:25,0:30:25.45:25,0,1476	0/0:27,0:26:30.81:0,31,753	1/1:8,0:10:15.03:232,15,0	1/1:8,0:20:9.02:192,9,0	0/1:18,0:22:11.96:213,0,12	1/1:21,0:32:9.41:215,9,0	1/1:20,0:36:20.74:584,21,0	0/1:8,0:12:0:0,0,0	0/0:22,0:26:47.60:0,48,1099	0/0:17,0:20:27.08:0,27,582	1/1:15,6:35:13.40:599,13,0	0/0:10,0:11:24.07:0,24,604
chr10	50376355	.	AT	A	2349.89	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=10.854;DP=556;FS=2.600;HRun=7;HaplotypeScore=53.1711;InbreedingCoeff=0.9946;MQ=79.60;MQ0=0;MQRankSum=-1.366;QD=23.04;ReadPosRankSum=-3.093;VQSLOD=2.4625;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:48.15:0,48,604	0/0:5,0:5:15.05:0,15,189	0/0:12,0:12:28.10:0,28,297	0/0:15,0:15:22.68:0,23,324	0/0:30,0:30:87.27:0,87,1083	0/0:21,0:21:57.18:0,57,717	0/0:15,0:15:45.12:0,45,551	1/1:4,22:26:66.14:673,66,0	0/0:16,0:16:45.14:0,45,566	0/0:37,0:37:99:0,99,1228	0/0:25,0:25:69.22:0,69,868	0/0:22,0:22:38.97:0,39,705	0/0:18,0:18:54.17:0,54,668	0/0:30,0:30:87.27:0,87,1082	0/0:20,0:20:60.19:0,60,755	0/0:19,0:18:51.15:0,51,629	0/0:19,0:19:57.18:0,57,717	0/0:11,0:11:30.10:0,30,377	1/1:6,17:23:54.09:536,54,0	1/1:1,16:17:45.10:459,45,0	1/1:0,9:9:27.06:275,27,0	0/0:21,0:21:63.20:0,63,793	0/0:20,0:20:60.19:0,60,751	0/0:15,0:15:45.11:0,45,549	0/0:32,0:32:90.28:0,90,1121	0/0:24,0:23:72.23:0,72,906	1/1:6,21:27:57.13:582,57,0	0/0:9,0:9:24.08:0,24,302
chr10	50376568	.	CT	C	4887.23	PASS	AB=0.842;AC=26;AF=0.464;AN=56;BaseQRankSum=11.060;DP=602;FS=9.902;HRun=11;HaplotypeScore=64.5931;InbreedingCoeff=0.7614;MQ=82.14;MQ0=0;MQRankSum=-1.533;QD=14.50;ReadPosRankSum=4.870;VQSLOD=4.5807;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,20:22:29:394,29,0	1/1:2,11:13:32.96:271,33,0	0/1:20,2:22:22.30:22,0,175	0/1:20,0:17:4.92:5,0,41	0/0:24,0:24:69.15:0,69,717	1/1:7,30:37:45.90:584,46,0	1/1:4,19:25:55:431,55,0	0/0:21,0:21:48.10:0,48,494	1/1:4,17:21:41.93:345,42,0	0/0:29,0:29:62.96:0,63,613	0/0:17,0:24:59.67:0,60,542	1/1:2,23:25:65.90:542,66,0	1/1:2,14:17:40.98:326,41,0	0/0:11,0:11:27.05:0,27,276	1/1:8,21:29:30.89:457,31,0	1/1:4,24:28:68.89:566,69,0	0/0:18,0:18:14.21:0,14,266	0/0:13,0:13:33.02:0,33,320	0/0:24,0:25:60.44:0,60,611	0/0:27,0:29:62.91:0,63,677	0/0:14,0:14:33.06:0,33,337	1/1:3,18:21:41.91:345,42,0	0/1:6,21:27:3.30:340,0,3	1/1:2,11:14:32:252,32,0	0/1:14,2:16:7.19:7,0,336	0/0:18,0:18:48.10:0,48,500	0/0:31,0:31:79.02:0,79,803	0/0:8,0:8:21.05:0,21,224
chr10	50378281	.	AG	A	6702.17	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=11.199;DP=742;FS=1.856;HRun=1;HaplotypeScore=91.8091;InbreedingCoeff=0.9999;MQ=84.19;MQ0=0;MQRankSum=-2.315;QD=36.42;ReadPosRankSum=2.077;VQSLOD=5.2497;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,24:24:57.19:796,57,0	1/1:0,12:12:33.11:461,33,0	0/0:27,0:27:78.24:0,78,1182	0/0:17,0:17:45.15:0,45,676	0/0:29,0:29:87.30:0,87,1388	1/1:0,24:24:63.21:880,63,0	1/1:0,24:24:66.22:923,66,0	0/0:42,0:42:99:0,126,2002	1/1:1,26:27:66.22:916,66,0	0/0:32,0:32:96.33:0,96,1532	0/0:20,0:20:57.19:0,57,908	0/0:31,0:31:93.26:0,93,1392	0/0:36,0:36:99:0,108,1724	0/0:25,0:25:75.24:0,75,1176	1/1:0,43:43:99:1594,114,0	1/1:0,30:30:81.27:1132,81,0	0/0:14,0:14:42.14:0,42,666	0/0:22,0:22:66.20:0,66,1026	0/0:26,0:26:75.24:0,75,1172	0/0:31,0:31:93.25:0,93,1451	0/0:30,0:30:90.29:0,90,1407	0/0:20,0:20:57.18:0,57,885	0/0:29,0:29:84.26:0,84,1289	0/0:23,0:23:66.17:0,66,976	0/0:33,0:33:99:0,99,1558	0/0:24,0:24:69.23:0,69,1079	0/0:36,0:36:99:0,105,1673	0/0:11,0:11:33.11:0,33,521
chr10	50380053	.	TACACACAC	T	570.55	PASS	AB=0.589;AC=8;AF=0.154;AN=52;BaseQRankSum=1.128;DP=566;FS=2.220;HRun=0;HaplotypeScore=151.7673;InbreedingCoeff=0.7192;MQ=63.11;MQ0=6;MQRankSum=-3.148;QD=6.20;ReadPosRankSum=0.097;VQSLOD=2.4860;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:39:36.90:0,37,623	1/1:5,7:12:11.99:248,12,0	./.	0/0:25,0:20:8.99:0,9,76	0/0:18,0:18:33.01:0,33,957	0/1:9,13:23:1.23:81,0,1	1/1:21,1:23:23.26:231,23,0	0/0:28,0:26:46:0,46,431	0/1:3,0:15:0:0,0,0	0/0:19,0:19:41.97:0,42,1077	0/0:18,0:20:27.55:0,28,767	0/0:19,0:20:25.50:0,25,333	0/0:18,0:19:23:0,23,342	0/0:14,0:14:29.96:0,30,484	./.	1/1:8,10:19:6.02:144,6,0	0/0:24,0:25:57.97:0,58,1638	0/0:18,0:20:45.11:0,45,1292	0/0:10,0:10:3.24:0,3,63	0/0:7,0:24:6.02:0,6,209	0/0:24,0:24:18.25:0,18,337	0/0:16,0:17:8.52:0,9,217	0/0:18,0:18:10.53:0,11,75	0/0:25,0:24:23.97:0,24,443	0/0:13,0:18:39.06:0,39,900	0/0:21,0:22:44.84:0,45,1117	0/0:9,0:14:18.84:0,19,360	0/0:6,0:6:11.97:0,12,163
chr10	50381333	.	GT	G	516.94	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.711;DP=603;FS=0.811;HRun=7;HaplotypeScore=90.5165;InbreedingCoeff=0.9758;MQ=90.03;MQ0=0;MQRankSum=-1.085;QD=19.88;ReadPosRankSum=0.234;VQSLOD=2.9590;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,24:26:60.14:612,60,0	0/0:5,0:5:15.04:0,15,176	0/0:30,0:29:32.22:0,32,578	0/0:35,0:33:55.29:0,55,664	0/0:11,0:11:30.09:0,30,363	0/0:17,0:17:45.07:0,45,530	0/0:31,0:31:84.27:0,84,1056	0/0:42,0:42:99:0,102,1212	0/0:23,0:23:57.16:0,57,692	0/0:16,0:16:45.14:0,45,566	0/0:13,0:13:39.12:0,39,491	0/0:28,0:28:72.15:0,72,863	0/0:25,0:25:51.16:0,51,630	0/0:20,0:20:57.16:0,57,688	0/0:19,0:19:51.14:0,51,616	0/0:24,0:24:60.19:0,60,755	0/0:25,0:25:72.21:0,72,881	0/0:20,0:20:57.18:0,57,715	0/0:27,0:27:69.22:0,69,863	0/0:23,0:23:69.22:0,69,867	0/0:19,0:19:48.15:0,48,603	0/0:21,0:21:54.16:0,54,661	0/0:18,0:18:44.99:0,45,526	0/0:29,0:29:84.27:0,84,1056	0/0:15,0:15:44.95:0,45,486	0/0:15,0:15:39.12:0,39,479	0/0:19,0:19:51.06:0,51,607	0/0:6,0:6:18.06:0,18,226
chr10	50381364	.	C	CT	2727.50	PASS	AB=0.933;AC=11;AF=0.196;AN=56;BaseQRankSum=-7.602;DP=601;FS=0.406;HRun=10;HaplotypeScore=87.3332;InbreedingCoeff=0.7422;MQ=81.64;MQ0=2;MQRankSum=0.676;QD=17.37;ReadPosRankSum=1.331;VQSLOD=4.0854;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:65.84:0,66,530	0/0:7,0:7:14.94:0,15,118	0/0:31,0:24:17.86:0,18,180	0/0:30,0:28:4.01:0,4,126	0/0:15,0:15:29.94:0,30,246	0/0:13,2:15:0.96:0,1,214	0/0:26,1:27:27.90:0,28,436	0/0:23,0:23:41.83:0,42,335	0/0:20,0:20:25.08:0,25,344	0/0:18,0:18:38.92:0,39,318	0/0:14,0:17:39.02:0,39,279	1/1:4,25:29:60.15:640,60,0	1/1:2,27:29:41.52:647,42,0	0/0:17,1:19:11.94:0,12,289	0/0:21,0:21:41.90:0,42,345	0/0:23,0:23:53.89:0,54,443	0/0:22,0:22:56.93:0,57,468	0/0:17,0:19:49.01:0,49,381	0/0:16,0:18:46.02:0,46,357	0/0:24,0:25:17.31:0,17,382	0/0:19,1:21:23.97:0,24,393	1/1:3,19:23:7.65:464,8,0	1/1:3,19:22:8.76:495,9,0	1/1:5,21:26:60.15:640,60,0	0/0:12,2:14:0.96:0,1,212	0/0:20,0:20:50.90:0,51,417	0/1:26,1:28:7.06:7,0,357	0/0:10,0:10:23.97:0,24,197
chr10	50381483	.	TCACACA	T	605.34	PASS	AB=0.972;AC=16;AF=0.308;AN=52;BaseQRankSum=3.408;DP=509;FS=8.885;HRun=0;HaplotypeScore=104.4171;InbreedingCoeff=0.4840;MQ=67.49;MQ0=11;MQRankSum=0.090;QD=3.33;ReadPosRankSum=0.496;VQSLOD=1.4954;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:17,2:19:2.99:0,3,24	0/0:5,0:9:3.01:0,3,38	./.	./.	0/0:11,0:11:9.03:0,9,176	1/1:15,0:20:0.88:2,1,0	0/1:16,0:16:18.78:19,0,38	0/0:22,0:21:0:0,0,0	1/1:12,0:21:3.54:7,4,0	0/1:23,0:22:15.34:15,0,57	0/0:15,0:15:3:0,3,25	1/1:12,2:13:9.50:171,10,0	1/1:13,8:21:15.05:299,15,0	0/0:20,0:20:18.03:0,18,263	0/0:19,0:20:17.86:0,18,164	0/0:14,0:18:5.10:0,5,75	0/0:17,0:17:18.06:0,18,438	0/0:12,0:18:22.61:0,23,449	0/0:12,0:12:6.02:0,6,181	0/0:17,0:17:3.01:0,3,96	0/0:13,0:13:5.67:0,6,191	1/1:25,0:25:8.96:104,9,0	1/1:14,0:15:6.01:87,6,0	1/1:22,4:26:2.80:53,3,0	0/0:11,0:13:15.05:0,15,380	0/0:21,0:21:26.49:0,26,572	0/0:11,0:13:15.03:0,15,350	0/0:10,0:10:18.06:0,18,527
chr10	50384075	.	T	TCACA	1235.29	PASS	AB=0.802;AC=18;AF=0.360;AN=50;BaseQRankSum=0.015;DP=573;FS=5.147;HRun=0;HaplotypeScore=115.7741;InbreedingCoeff=0.6143;MQ=58.54;MQ0=18;MQRankSum=-1.013;QD=6.03;ReadPosRankSum=-2.787;VQSLOD=1.7195;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:28:5.85:0,6,56	0/0:9,0:9:9.03:0,9,139	./.	./.	0/0:26,0:26:3.79:0,4,302	0/0:15,0:17:9.02:0,9,100	0/1:10,0:15:14.13:14,0,156	1/1:23,0:21:4.83:61,5,0	0/0:20,0:22:24.06:0,24,328	0/0:23,0:23:14.40:0,14,204	0/0:14,0:15:8.58:0,9,251	1/1:26,0:25:8.20:91,8,0	1/1:17,0:17:15.02:200,15,0	0/0:12,0:12:9.03:0,9,138	0/0:19,0:19:12.03:0,12,186	0/0:10,0:12:15.03:0,15,192	0/0:19,0:20:14.95:0,15,195	0/0:10,0:13:14.59:0,15,133	1/1:18,0:18:18.06:294,18,0	1/1:7,6:15:8.77:153,9,0	1/1:17,0:14:12.04:193,12,0	./.	1/1:20,0:18:6.01:80,6,0	1/1:36,0:35:2.98:22,3,0	0/0:16,0:17:12.02:0,12,149	0/0:13,0:13:14.07:0,14,192	0/1:9,7:18:25.63:301,0,26	0/0:11,0:10:8.51:0,9,102
chr10	50384520	.	C	CT	14245.97	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-13.607;DP=550;FS=16.676;HRun=2;HaplotypeScore=52.2128;InbreedingCoeff=0.9994;MQ=78.09;MQ0=0;MQRankSum=-1.638;QD=38.50;ReadPosRankSum=1.117;VQSLOD=3.2536;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,36:38:99:1425,99,0	1/1:1,7:8:24.08:336,24,0	0/0:13,0:13:36.05:0,36,406	0/0:10,0:10:27.05:0,27,301	0/0:25,0:25:72.23:0,72,893	1/1:1,28:29:72.24:1037,72,0	1/1:0,17:17:48.16:691,48,0	1/1:2,25:27:75.21:1041,75,0	1/1:1,20:21:48.16:691,48,0	0/0:19,0:19:54.16:0,54,660	0/0:21,0:21:60.19:0,60,744	1/1:0,23:23:60.20:864,60,0	1/1:1,20:21:63.21:904,63,0	0/0:20,0:20:60.16:0,60,727	1/1:0,23:23:60.20:864,60,0	1/1:1,18:19:48.16:691,48,0	0/0:16,0:16:45.14:0,45,558	0/0:12,0:12:33.10:0,33,409	1/1:0,14:14:39.13:560,39,0	1/1:0,25:25:69.23:994,69,0	1/1:0,13:13:33.11:475,33,0	1/1:0,20:20:60.20:864,60,0	1/1:0,26:26:63.21:907,63,0	1/1:0,20:20:57.19:820,57,0	0/0:10,0:10:30.09:0,30,372	0/0:22,0:22:66.21:0,66,818	1/1:0,26:25:75.25:1080,75,0	0/0:12,0:12:36.11:0,36,445
chr10	50385093	.	ATGTG	A	3645.60	PASS	AB=1.000;AC=27;AF=0.519;AN=52;BaseQRankSum=-0.657;DP=492;FS=0.000;HRun=0;HaplotypeScore=111.3957;InbreedingCoeff=0.6742;MQ=56.52;MQ0=17;MQRankSum=0.081;QD=14.41;ReadPosRankSum=2.448;VQSLOD=3.2619;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:28:18.04:0,18,253	1/1:7,4:11:6.02:84,6,0	0/0:25,0:15:3.01:0,3,67	./.	0/0:18,0:26:12.02:0,12,183	1/1:10,22:33:2.16:168,2,0	1/1:13,2:15:14.63:219,15,0	0/1:32,0:30:27.31:134,0,27	1/1:8,4:13:24.08:347,24,0	0/0:20,0:19:30.09:0,30,512	0/0:13,0:25:12.04:0,12,204	1/1:3,8:14:3:28,3,0	1/1:11,5:17:9.85:210,10,0	0/0:7,0:6:12.04:0,12,239	1/1:6,9:16:24.01:356,24,0	1/1:3,12:14:14.52:240,15,0	0/0:16,0:16:21.07:0,21,417	./.	1/1:20,0:18:4.35:86,4,0	1/1:12,9:21:42.13:634,42,0	1/1:7,0:6:6.02:78,6,0	1/1:8,5:13:10.81:136,11,0	0/0:5,5:12:0:0,0,1	0/0:6,3:9:0:0,0,0	0/0:8,0:21:15.04:0,15,230	0/0:21,0:20:30.05:0,30,497	1/1:12,10:23:62.69:926,63,0	0/0:5,0:7:3.01:0,3,52
chr10	50385155	.	C	CAG	2912.63	PASS	AB=0.655;AC=20;AF=0.357;AN=56;BaseQRankSum=-3.612;DP=505;FS=16.166;HRun=0;HaplotypeScore=87.6375;InbreedingCoeff=0.6040;MQ=47.99;MQ0=24;MQRankSum=-2.822;QD=11.07;ReadPosRankSum=-2.168;VQSLOD=1.8802;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,13:19:9.03:147,9,0	1/1:6,1:5:9.01:92,9,0	0/0:6,0:2:4.74:0,5,16	0/0:17,0:4:8.21:0,8,43	0/0:18,0:18:27.05:0,27,307	1/1:30,6:31:33.06:441,33,0	0/1:10,11:21:91.89:173,0,92	1/1:18,19:35:22.28:724,22,0	0/1:8,9:18:15.88:219,0,16	0/0:13,0:11:26.90:0,27,295	0/0:27,0:27:42.11:0,42,489	0/0:14,0:15:10.67:0,11,146	0/0:15,0:14:28.84:0,29,339	0/0:17,0:16:32.68:0,33,404	0/1:11,9:19:21.69:120,0,22	1/1:15,0:10:12.04:196,12,0	0/0:17,0:17:34.79:0,35,434	0/0:7,0:6:5.81:0,6,73	1/1:10,7:15:23.84:305,24,0	0/1:12,13:21:46.70:272,0,47	1/1:6,12:17:11.53:156,12,0	0/0:17,0:16:11.46:0,11,246	0/0:15,0:14:23.54:0,24,254	0/0:18,0:17:23.66:0,24,268	0/0:25,0:25:42.13:0,42,517	0/0:9,0:9:21.07:0,21,258	1/1:14,9:23:21.06:267,21,0	0/0:5,0:5:12:0,12,130
chr10	50387297	.	A	AG	108.04	PASS	AB=1.000;AC=7;AF=0.438;AN=16;BaseQRankSum=2.219;DP=512;FS=7.782;HRun=0;HaplotypeScore=5.0726;MQ=10.02;MQ0=306;MQRankSum=1.307;QD=1.80;ReadPosRankSum=0.361;VQSLOD=-0.5083;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	1/1:20,1:5:3.01:48,3,0	./.	./.	./.	./.	0/0:27,1:1:3.01:0,3,42	0/1:10,0:3:0:0,0,0	./.	./.	./.	./.	./.	0/0:40,0:8:3.01:0,3,42	./.	./.	./.	./.	1/1:14,4:2:6.02:95,6,0	0/0:19,0:1:3.01:0,3,42	./.	./.	0/0:35,0:2:6.02:0,6,84	1/1:9,2:1:3.01:48,3,0	./.
chr10	50387583	.	G	GTT	505.24	PASS	AB=0.750;AC=20;AF=0.500;AN=40;BaseQRankSum=5.303;DP=114;FS=37.169;HRun=0;HaplotypeScore=35.5100;InbreedingCoeff=0.5162;MQ=21.65;MQ0=25;MQRankSum=-0.781;QD=10.10;ReadPosRankSum=-1.229;VQSLOD=0.9390;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,4:3:8.98:72,9,0	./.	./.	./.	0/1:4,2:2:15.98:16,0,43	0/0:3,0:3:8.99:0,9,74	0/0:10,0:2:5.99:0,6,51	1/1:6,3:3:9.02:95,9,0	0/0:5,0:4:8.99:0,9,118	1/1:7,4:4:12.03:142,12,0	./.	0/0:2,0:2:6.02:0,6,98	1/1:0,1:1:2.99:23,3,0	./.	0/0:8,0:6:15.01:0,15,172	0/0:6,0:6:15.03:0,15,198	0/0:3,0:3:6.02:0,6,93	1/1:1,1:1:3.01:31,3,0	0/0:6,0:4:12.04:0,12,196	./.	./.	0/0:9,0:3:6.02:0,6,98	./.	0/1:2,1:3:15.07:15,0,43	1/1:2,2:3:5.99:49,6,0	1/1:1,4:4:12.03:124,12,0	1/1:1,2:2:6.01:60,6,0	1/1:1,1:1:3:29,3,0
chr10	50387700	.	G	GA	2743.98	PASS	AB=0.720;AC=33;AF=0.589;AN=56;BaseQRankSum=2.929;DP=338;FS=2.659;HRun=10;HaplotypeScore=53.0203;InbreedingCoeff=0.7264;MQ=73.28;MQ0=3;MQRankSum=-0.585;QD=11.98;ReadPosRankSum=-1.613;VQSLOD=2.6565;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,21:22:51.11:531,51,0	1/1:1,0:3:5.68:28,6,0	0/1:15,0:16:35.21:35,0,150	0/0:10,0:8:9.74:0,10,66	0/0:9,0:9:17.97:0,18,148	1/1:1,0:7:17.04:85,17,0	1/1:1,0:12:28.41:142,28,0	1/1:8,1:24:51.60:291,52,0	1/1:1,0:5:11.48:62,11,0	0/0:13,0:13:35.96:0,36,296	0/0:9,0:9:14.97:0,15,123	1/1:4,14:18:8.91:295,9,0	1/1:0,14:14:30.08:320,30,0	0/0:8,0:8:14.98:0,15,123	1/1:2,1:11:19.89:100,20,0	1/1:5,0:14:14.20:71,14,0	0/0:12,0:12:32.96:0,33,271	0/0:7,0:7:17.97:0,18,148	0/1:6,1:12:7.53:51,0,8	1/1:2,0:12:25.68:133,26,0	1/1:1,1:9:20.05:117,20,0	1/1:0,6:6:18.05:192,18,0	1/1:0,6:6:18.05:192,18,0	0/1:5,11:16:13.20:284,0,13	0/0:15,0:15:35.96:0,36,296	0/0:13,0:13:38.96:0,39,320	1/1:4,1:17:5.36:29,5,0	0/0:13,0:13:32.87:0,33,258
chr10	50387897	.	C	CG	2285.29	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-1.361;DP=345;FS=6.432;HRun=0;HaplotypeScore=51.3445;InbreedingCoeff=0.9203;MQ=80.80;MQ0=0;MQRankSum=-2.521;QD=35.71;ReadPosRankSum=1.872;VQSLOD=2.9980;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:51.17:0,51,707	0/0:5,0:5:15.05:0,15,208	0/0:12,0:12:36.11:0,36,471	0/0:19,0:19:51.38:0,51,600	0/0:2,0:2:6.02:0,6,83	0/0:20,0:20:57.12:0,57,746	0/0:18,0:18:51.01:0,51,626	0/0:19,0:19:54.05:0,54,754	0/0:17,0:17:45.05:0,45,582	0/0:9,0:9:24.08:0,24,332	0/0:2,0:2:6.02:0,6,83	1/1:1,13:14:39.60:590,40,0	1/1:1,9:10:27.09:405,27,0	0/0:12,0:12:36.12:0,36,503	0/0:11,0:11:32.96:0,33,392	0/0:17,0:17:50.95:0,51,622	0/0:13,0:13:36.12:0,36,502	0/0:5,0:5:9.03:0,9,126	0/0:17,0:17:45.07:0,45,571	0/0:11,0:11:33:0,33,396	0/0:21,0:21:60.10:0,60,773	1/1:0,7:7:14.88:198,15,0	1/1:0,12:12:32.94:477,33,0	1/1:2,19:21:49.02:789,49,0	0/0:5,0:5:15.05:0,15,209	0/0:6,0:6:18.06:0,18,251	0/0:16,0:16:45.15:0,45,627	0/0:4,0:4:12.04:0,12,167
chr10	50394781	.	AATCGT	A	7699.26	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=11.656;DP=456;FS=37.158;HRun=0;HaplotypeScore=97.2784;InbreedingCoeff=0.9974;MQ=81.75;MQ0=1;MQRankSum=-12.167;QD=55.39;ReadPosRankSum=-0.482;VQSLOD=3.0425;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,12:13:36.12:802,36,0	0/0:7,0:7:21.07:0,21,677	0/0:15,0:15:45.15:0,45,1429	0/0:20,0:20:57.20:0,57,1748	0/0:12,0:12:33.11:0,33,1057	0/0:24,0:24:69.24:0,69,2224	0/0:14,0:14:39.13:0,39,1258	1/1:2,11:13:33.05:567,33,0	0/0:20,0:20:57.20:0,57,1835	0/0:20,0:20:60.21:0,60,1906	0/0:16,0:16:39.13:0,39,1250	1/1:2,11:13:30.10:668,30,0	1/1:1,17:18:51.18:1134,51,0	0/0:27,0:27:81.28:0,81,2610	0/0:26,0:26:66.23:0,66,2125	0/0:18,0:18:48.16:0,48,1547	0/0:30,0:30:84.29:0,84,2650	0/0:17,0:17:51.18:0,51,1647	1/1:0,9:9:27.09:587,27,0	1/1:1,20:21:48.16:1069,48,0	1/1:0,7:7:21.07:468,21,0	1/1:1,10:11:24.08:534,24,0	1/1:0,11:11:30.10:668,30,0	1/1:2,8:9:21.07:468,21,0	0/0:17,0:17:48.16:0,48,1546	0/0:25,0:25:75.25:0,75,2350	1/1:2,11:13:33.11:734,33,0	0/0:9,0:9:27.09:0,27,871
chr10	50396063	.	C	CTTT	7760.97	PASS	AB=1.000;AC=35;AF=0.625;AN=56;BaseQRankSum=6.156;DP=552;FS=2.272;HRun=11;HaplotypeScore=93.6308;InbreedingCoeff=0.9158;MQ=78.75;MQ0=0;MQRankSum=-3.241;QD=21.38;ReadPosRankSum=-2.986;VQSLOD=3.1529;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,0:41:84.17:646,84,0	1/1:0,0:6:17.93:137,18,0	0/0:21,0:19:18.84:0,19,148	0/1:17,0:18:15.88:16,0,89	0/0:22,0:24:55.62:0,56,646	1/1:6,1:21:32.90:286,33,0	1/1:4,1:21:36.64:295,37,0	1/1:28,0:28:48.09:610,48,0	1/1:5,0:12:11.95:93,12,0	0/0:18,0:18:42.05:0,42,491	0/0:13,0:13:33.06:0,33,375	1/1:3,14:22:36.10:598,36,0	1/1:3,14:17:24.03:414,24,0	0/0:23,0:25:59.87:0,60,654	1/1:2,0:21:47.82:367,48,0	1/1:1,1:19:44.46:365,44,0	0/0:22,0:22:47.97:0,48,561	0/0:12,0:12:27.05:0,27,315	1/1:21,1:22:38.91:515,39,0	1/1:12,0:12:28.61:324,29,0	1/1:14,0:14:14.41:176,14,0	1/1:8,17:27:60.19:914,60,0	1/1:4,17:23:53.19:913,53,0	1/1:2,12:19:43.30:655,43,0	0/0:19,0:19:41.97:0,42,469	0/0:23,0:23:66.19:0,66,771	1/1:18,0:17:32.89:440,33,0	0/0:12,0:12:36.08:0,36,408
chr10	50396074	.	T	TTTA	5675.13	PASS	AB=1.000;AC=22;AF=0.393;AN=56;BaseQRankSum=6.654;DP=541;FS=4.561;HRun=0;HaplotypeScore=91.1019;InbreedingCoeff=0.1162;MQ=76.29;MQ0=0;MQRankSum=-1.017;QD=16.50;ReadPosRankSum=2.690;VQSLOD=4.1913;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:41,0:41:97.65:118,0,98	0/1:8,0:8:21.52:22,0,23	0/0:17,0:16:29.63:0,30,295	0/0:15,0:14:20.04:0,20,220	0/0:23,0:23:68.66:0,69,948	0/1:19,0:19:57.25:57,0,76	0/1:21,0:21:60.36:102,0,60	1/1:3,22:28:75.15:1194,75,0	0/1:10,0:10:28.72:47,0,29	0/0:20,0:20:57.11:0,57,782	0/0:14,0:14:42.08:0,42,566	0/1:22,0:22:56.42:240,0,56	0/1:14,0:14:12.84:185,0,13	0/0:23,0:23:69.16:0,69,950	0/1:24,0:24:33.87:61,0,34	0/1:21,0:21:18.30:76,0,18	0/0:20,0:20:60.09:0,60,835	0/0:10,0:10:30.09:0,30,444	1/1:3,11:21:54.05:868,54,0	1/1:1,10:14:36.12:640,36,0	1/1:0,10:12:15.05:298,15,0	0/1:27,0:27:99:400,0,136	0/1:26,0:26:99:414,0,101	0/1:19,0:19:8.32:285,0,8	0/0:16,0:16:48.07:0,48,637	0/0:25,0:25:72.23:0,72,1081	1/1:1,12:16:33.11:668,33,0	0/0:13,0:13:39.12:0,39,582
chr10	50396612	.	GTATATATATATATATATATATATATATATATATATATATATATATATA	G	527.72	PASS	AC=10;AF=0.294;AN=34;BaseQRankSum=0.424;DP=198;FS=15.433;HRun=0;HaplotypeScore=230.1708;InbreedingCoeff=0.4102;MQ=77.51;MQ0=0;MQRankSum=-0.743;QD=6.36;ReadPosRankSum=-0.053;VQSLOD=1.3400;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:22:3.01:46,3,0	./.	0/0:7,0:6:2.68:0,3,11	0/0:9,0:7:3.01:0,3,54	0/0:7,0:7:6.02:0,6,187	./.	0/0:5,0:5:6:0,6,73	1/1:10,0:10:3.01:56,3,0	0/0:5,0:5:3.01:0,3,94	./.	./.	0/0:5,0:5:3:0,3,25	./.	./.	0/0:10,0:10:9.03:0,9,372	./.	0/0:11,0:11:14.94:0,15,1178	0/0:9,0:9:5.78:0,6,599	./.	1/1:22,6:28:8.99:433,9,0	1/1:10,0:10:3.01:30,3,0	0/0:8,0:8:3:0,3,26	0/0:6,0:6:3.01:0,3,50	./.	./.	./.	1/1:13,0:13:3.01:76,3,0	0/0:1,0:1:3.01:0,3,66
chr10	50397369	.	C	CTT	2176.76	PASS	AB=0.615;AC=18;AF=0.321;AN=56;BaseQRankSum=4.106;DP=513;FS=9.209;HRun=11;HaplotypeScore=74.0018;InbreedingCoeff=0.6614;MQ=68.89;MQ0=3;MQRankSum=0.800;QD=13.35;ReadPosRankSum=1.395;VQSLOD=1.4533;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:53.98:0,54,522	0/1:2,0:8:11.25:33,0,11	0/0:22,1:14:1.08:0,1,112	0/0:11,0:6:5.43:0,5,56	0/0:27,0:27:72.07:0,72,698	1/1:4,0:18:27.83:101,28,0	0/1:2,0:10:8.57:39,0,9	0/0:32,0:32:65.91:0,66,630	0/1:7,1:11:12.01:45,0,12	0/0:23,0:23:50.98:0,51,494	0/0:22,0:23:56.40:0,56,526	1/1:3,9:15:21.05:259,21,0	1/1:2,11:14:26.24:323,26,0	0/0:17,0:17:39.04:0,39,372	1/1:2,0:18:20.60:97,21,0	0/1:4,0:12:6.26:46,0,6	0/0:21,0:21:42:0,42,393	0/0:17,0:17:42.02:0,42,407	0/0:18,0:18:36.01:0,36,349	0/0:27,0:27:56.69:0,57,524	0/0:13,0:13:23.69:0,24,214	1/1:2,12:14:27.05:362,27,0	1/1:3,14:18:42.09:593,42,0	1/1:9,15:23:33.11:478,33,0	0/0:17,0:17:45.01:0,45,418	0/0:18,0:18:35.96:0,36,394	0/0:30,0:30:71.98:0,72,685	0/0:6,0:6:18.03:0,18,175
chr10	50398230	.	CAAGTAAAAACCTTTACCTTCATGCTCATCAGTCACAG	C	21452.27	PASS	AC=20;AF=0.370;AN=54;BaseQRankSum=13.907;DP=629;FS=3.416;HRun=0;HaplotypeScore=567.1861;InbreedingCoeff=0.9771;MQ=90.11;MQ0=0;MQRankSum=-13.505;QD=121.20;ReadPosRankSum=8.315;VQSLOD=1.5230;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,163,21590	1/1:3,8:11:14.88:1438,15,0	0/0:30,0:30:81.23:0,81,5201	0/0:25,0:25:69.20:0,69,5406	0/0:18,0:18:51.18:0,51,7404	1/1:5,10:15:24.08:2274,24,0	./.	0/0:34,0:34:99:0,102,8372	1/1:7,12:19:27.09:2573,27,0	0/0:22,0:22:63.22:0,63,8872	0/0:19,0:19:57.20:0,57,8203	1/1:5,12:17:24.12:2301,24,0	1/1:7,7:14:21.07:2011,21,0	0/0:23,0:23:66.21:0,66,8807	1/1:11,14:25:36.12:3431,36,0	1/1:13,17:30:42.14:4026,42,0	0/0:21,0:21:63.22:0,63,7986	0/0:15,0:15:45.15:0,45,6871	0/0:28,0:28:75.24:0,75,7742	0/0:34,0:34:99:0,99,13514	0/0:15,0:15:45.15:0,45,6648	1/1:10,5:15:9.03:863,9,0	1/1:9,7:16:21.07:1942,21,0	1/1:6,9:15:8.72:595,9,0	0/0:24,0:24:72.25:0,72,10148	0/0:38,0:38:99:0,108,14794	0/0:25,0:25:69.24:0,69,10073	0/0:16,0:16:48.16:0,48,6740
chr10	50398372	.	TC	T	8123.14	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=8.077;DP=788;FS=4.803;HRun=2;HaplotypeScore=127.2453;InbreedingCoeff=1.0000;MQ=93.32;MQ0=0;MQRankSum=-2.504;QD=36.76;ReadPosRankSum=-0.585;VQSLOD=4.0168;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,57:58:99:2025,157,0	0/0:16,0:16:48.11:0,48,648	0/0:36,0:36:99:0,105,1488	0/0:34,0:34:87.28:0,87,1215	0/0:27,0:27:81.26:0,81,1193	0/0:39,0:39:99:0,117,1687	0/0:24,0:24:69.17:0,69,1004	1/1:0,46:46:99:1709,138,0	0/0:38,0:38:99:0,111,1641	0/0:31,0:31:87.28:0,87,1253	0/0:24,0:24:69.15:0,69,988	0/0:26,0:26:72.24:0,72,1077	0/0:26,0:26:75.25:0,75,1124	0/0:23,0:23:63.19:0,63,920	0/0:26,0:26:75.23:0,75,1098	0/0:26,0:26:75.25:0,75,1122	0/0:17,0:17:48.15:0,48,699	0/0:18,0:18:54.14:0,54,783	1/1:0,31:31:93.27:1167,93,0	1/1:1,27:28:81.26:1042,81,0	1/1:1,30:31:87.28:1130,87,0	0/0:28,0:28:81.26:0,81,1193	0/0:25,0:25:75.25:0,75,1121	0/0:19,0:19:54.10:0,54,758	0/0:15,0:15:45.15:0,45,674	0/0:33,0:33:96.31:0,96,1404	1/1:0,27:27:81.26:1051,81,0	0/0:16,0:16:42.14:0,42,629
chr10	50399220	.	G	GA	5683.28	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-15.377;DP=653;FS=4.061;HRun=5;HaplotypeScore=95.8952;InbreedingCoeff=0.9909;MQ=91.12;MQ0=0;MQRankSum=-2.906;QD=33.04;ReadPosRankSum=-0.146;VQSLOD=4.6142;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,50:54:99:1737,132,0	0/0:11,0:11:10.28:0,10,153	0/0:25,0:25:58.01:0,58,605	0/0:27,0:27:65.31:0,65,691	0/0:22,0:22:57.11:0,57,595	0/0:18,0:18:52.32:0,52,295	0/0:27,0:27:68.97:0,69,361	1/1:6,34:40:99:1342,102,0	0/0:19,0:19:49.30:0,49,281	0/0:20,0:20:51.12:0,51,548	0/0:22,0:22:66.17:0,66,709	0/0:24,0:24:63.77:0,64,364	0/0:19,0:19:43.28:0,43,250	0/0:25,0:25:66.05:0,66,677	0/0:29,0:29:72.55:0,73,401	0/0:26,0:26:38.86:0,39,305	0/0:32,0:32:90.22:0,90,967	0/0:19,0:19:57.14:0,57,612	1/1:2,13:15:39.13:513,39,0	1/1:1,16:17:45.15:592,45,0	1/1:4,17:21:48.16:632,48,0	0/0:18,0:18:46.32:0,46,255	0/0:19,0:19:49.16:0,49,282	0/0:30,0:30:87.21:0,87,493	0/0:15,0:15:36.06:0,36,377	0/0:20,0:20:54.14:0,54,580	1/1:1,24:24:66.21:868,66,0	0/0:14,0:14:42.11:0,42,451
chr10	50399790	.	AT	A	6574.46	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=4.792;DP=666;FS=2.608;HRun=8;HaplotypeScore=76.8457;InbreedingCoeff=0.9997;MQ=82.63;MQ0=0;MQRankSum=-1.251;QD=25.88;ReadPosRankSum=1.776;VQSLOD=5.7065;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:87.26:0,87,1040	1/1:1,17:18:45.07:435,45,0	0/0:17,0:17:38.60:0,39,433	0/0:22,1:22:46.97:0,47,556	0/0:29,0:29:87.27:0,87,1048	1/1:1,32:33:90.14:869,90,0	1/1:2,18:20:51.08:493,51,0	0/0:26,0:26:75.23:0,75,906	1/1:1,17:18:48.08:464,48,0	0/0:32,0:32:93.28:0,93,1110	0/0:29,0:29:81.24:0,81,967	1/1:2,25:27:66.10:637,66,0	1/1:0,25:25:69.11:666,69,0	0/0:18,0:18:51.16:0,51,616	1/1:2,24:26:69.11:666,69,0	1/1:1,13:14:36.06:348,36,0	0/0:25,0:24:75.23:0,75,906	0/0:13,0:13:28.33:0,28,329	0/0:29,0:28:72.07:0,72,837	0/0:27,0:27:72.20:0,72,848	0/0:16,0:16:39.12:0,39,471	1/1:1,22:23:60.09:578,60,0	1/1:0,26:26:78.13:753,78,0	1/1:1,23:24:69.11:666,69,0	0/0:25,0:25:66.66:0,67,784	0/0:33,0:33:90.25:0,90,1056	0/0:26,0:26:72.21:0,72,857	0/0:11,0:11:27.08:0,27,326
chr10	50401516	.	CCA	C	382.17	PASS	AB=0.957;AC=11;AF=0.220;AN=50;BaseQRankSum=-2.132;DP=568;FS=3.947;HRun=0;HaplotypeScore=96.6392;InbreedingCoeff=0.0831;MQ=63.86;MQ0=23;MQRankSum=0.566;QD=2.21;ReadPosRankSum=0.723;VQSLOD=1.5942;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:37,1:37:62.73:63,0,298	0/0:10,0:10:3.01:0,3,31	./.	0/0:35,0:22:2.04:0,2,6	0/0:12,0:12:12.04:0,12,173	0/0:19,0:19:3.01:0,3,32	0/0:33,0:35:24.61:0,25,198	0/0:19,0:16:9.79:0,10,75	0/0:18,0:19:8.97:0,9,89	1/1:6,5:10:11.82:93,12,0	./.	0/0:23,0:22:11.99:0,12,130	0/0:15,0:14:15.03:0,15,175	0/1:19,1:20:43.92:44,0,159	0/0:14,0:14:5.98:0,6,57	0/0:15,0:13:11.77:0,12,119	0/1:38,0:38:31.05:31,0,533	0/1:15,0:15:37.18:37,0,135	0/0:8,0:8:8.66:0,9,77	0/0:8,0:15:12:0,12,121	0/0:27,0:29:38.26:0,38,353	./.	0/1:13,0:12:20.40:20,0,63	0/0:31,0:27:17.97:0,18,180	0/1:11,1:12:23.29:23,0,199	1/1:16,0:17:20.85:180,21,0	0/0:22,0:24:30.43:0,30,286	0/1:6,1:7:15.09:38,0,15
chr10	50401861	.	GAGT	G	8430.07	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=11.751;DP=632;FS=2.840;HRun=0;HaplotypeScore=132.1436;InbreedingCoeff=0.9931;MQ=92.96;MQ0=0;MQRankSum=-9.016;QD=40.34;ReadPosRankSum=4.507;VQSLOD=6.0846;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,117,2282	1/1:0,8:8:15.05:256,15,0	0/0:23,0:23:68.97:0,69,1307	0/0:38,0:38:96.27:0,96,1967	0/0:15,0:15:45.15:0,45,1029	1/1:1,14:15:39.13:641,39,0	1/1:0,26:26:66.23:1124,66,0	0/0:29,0:29:87.29:0,87,1959	1/1:1,18:19:48.16:807,48,0	0/0:19,0:19:51.17:0,51,1170	0/0:21,0:21:57.20:0,57,1265	1/1:1,27:28:72.25:1213,72,0	1/1:0,23:23:57.19:955,57,0	0/0:30,0:30:87.30:0,87,1996	1/1:0,25:25:66.22:1102,66,0	1/1:2,19:21:57.19:960,57,0	0/0:41,0:41:99:0,117,2561	0/0:23,0:23:63.20:0,63,1399	0/0:20,0:20:60.16:0,60,1265	0/0:12,0:12:30.10:0,30,650	0/0:35,0:35:99:0,102,2152	1/1:1,15:16:39.09:620,39,0	1/1:2,10:12:12:173,12,0	1/1:0,16:16:36.05:580,36,0	0/0:14,0:14:39.07:0,39,842	0/0:23,0:23:63.19:0,63,1403	0/0:28,0:28:75.21:0,75,1635	0/0:10,0:10:30.10:0,30,680
chr10	50402105	.	TA	T	3574.67	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=9.613;DP=517;FS=1.227;HRun=8;HaplotypeScore=65.4373;InbreedingCoeff=0.9929;MQ=75.79;MQ0=0;MQRankSum=1.014;QD=25.17;ReadPosRankSum=-1.484;VQSLOD=3.9115;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,21:22:60.10:579,60,0	0/0:9,0:9:27.07:0,27,315	0/0:14,0:15:26.44:0,26,295	0/0:7,0:7:12.03:0,12,137	0/0:19,0:19:51.16:0,51,615	0/0:22,0:22:63.19:0,63,761	0/0:16,0:16:42.13:0,42,507	1/1:4,33:37:99:939,99,0	0/0:16,0:16:48.15:0,48,580	0/0:27,0:27:69.21:0,69,825	0/0:26,0:26:72.22:0,72,868	0/0:11,0:11:33.10:0,33,398	0/0:12,0:12:36.11:0,36,434	0/0:12,0:12:33.07:0,33,383	0/0:16,0:16:42.12:0,42,496	0/0:15,0:15:42.13:0,42,507	0/0:20,0:20:57.17:0,57,689	0/0:23,0:23:66.16:0,66,781	1/1:1,14:15:39.06:376,39,0	1/1:1,27:28:75.11:723,75,0	1/1:0,14:14:36.06:348,36,0	0/0:23,0:23:63.19:0,63,761	0/0:19,0:19:51.16:0,51,615	0/0:17,0:17:42.13:0,42,507	0/0:17,0:17:48.14:0,48,571	0/0:24,0:24:69.21:0,69,834	1/1:4,22:26:63.10:608,63,0	0/0:9,0:9:27.08:0,27,326
chr10	50403351	.	C	CAT	1998.83	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=5.852;DP=531;FS=5.201;HRun=0;HaplotypeScore=88.5290;InbreedingCoeff=0.9101;MQ=61.35;MQ0=1;MQRankSum=-0.579;QD=10.10;ReadPosRankSum=2.045;VQSLOD=3.0506;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:7.12:0,7,330	1/1:6,1:7:18.01:191,18,0	0/0:25,0:16:44.71:0,45,405	0/0:17,0:13:36.03:0,36,349	0/0:25,0:24:56.71:0,57,542	1/1:27,0:27:9.03:125,9,0	1/1:10,1:11:3.01:56,3,0	0/0:31,0:31:81.99:0,82,744	1/1:17,1:18:6.02:101,6,0	0/0:16,0:16:35.98:0,36,379	0/0:23,0:23:59.66:0,60,543	1/1:18,0:18:9.92:250,10,0	1/1:18,0:18:22.51:251,23,0	0/0:7,0:7:17.98:0,18,152	1/1:16,3:19:20.96:319,21,0	1/1:17,0:17:6.02:78,6,0	0/0:26,0:25:65.75:0,66,631	0/0:16,0:16:35.71:0,36,305	0/0:23,0:23:44.17:0,44,484	0/0:23,0:23:59.87:0,60,494	0/0:10,0:10:20.96:0,21,172	1/1:17,0:17:35.57:273,36,0	1/1:21,0:21:25.34:215,25,0	1/1:25,0:25:44.76:352,45,0	0/0:12,0:12:16.61:0,17,308	0/0:19,0:19:54.06:0,54,589	0/0:24,0:24:21.34:0,21,341	0/0:13,0:13:35.89:0,36,282
chr10	50403352	.	A	ATATC	2177.87	PASS	AB=0.898;AC=20;AF=0.357;AN=56;BaseQRankSum=3.645;DP=588;FS=6.035;HRun=0;HaplotypeScore=124.6893;InbreedingCoeff=0.4483;MQ=59.96;MQ0=2;MQRankSum=-2.581;QD=7.92;ReadPosRankSum=0.230;VQSLOD=2.2099;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:24:41.11:0,41,416	1/1:7,1:8:14.52:176,15,0	0/0:25,0:16:44.71:0,45,405	0/0:17,0:13:36.03:0,36,349	0/0:26,0:26:56.62:0,57,632	1/1:9,2:33:9.50:223,10,0	1/1:2,1:12:3.01:47,3,0	0/0:34,0:34:23:0,23,675	0/1:7,14:23:7.33:109,0,7	0/0:19,0:19:34.85:0,35,422	0/0:19,0:23:59.46:0,59,617	0/1:19,0:19:52.18:224,0,52	0/1:18,0:18:38.01:174,0,38	0/0:7,0:7:17.99:0,18,166	1/1:5,14:21:1.26:391,1,0	1/1:1,1:19:6.02:148,6,0	0/0:30,0:30:65.79:0,66,773	0/0:14,0:15:35.74:0,36,364	0/1:27,0:27:67.08:67,0,429	0/0:29,0:29:28.55:0,29,428	0/0:12,0:12:20.96:0,21,172	1/1:18,0:18:31.20:259,31,0	0/1:22,0:21:11.21:176,0,11	1/1:26,0:26:13.38:296,13,0	0/0:12,0:14:32.70:0,33,423	0/0:23,0:23:37.13:0,37,667	0/1:21,0:28:74:74,0,312	0/0:13,0:13:35.89:0,36,282
chr10	50403394	.	CTCTT	C	1428.13	PASS	AB=0.948;AC=13;AF=0.232;AN=56;BaseQRankSum=0.450;DP=577;FS=5.487;HRun=0;HaplotypeScore=118.5993;InbreedingCoeff=0.0645;MQ=54.49;MQ0=11;MQRankSum=2.590;QD=6.43;ReadPosRankSum=2.334;VQSLOD=2.1950;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:28:54.48:0,54,688	0/1:8,0:8:55.90:56,0,107	0/0:25,0:15:41.92:0,42,366	0/0:29,0:19:37.84:0,38,451	0/0:23,0:23:35.64:0,36,724	0/1:25,0:25:68.50:173,0,68	0/1:18,0:18:12.80:209,0,13	0/0:27,0:27:77.98:0,78,750	0/1:26,0:25:30.54:168,0,31	0/0:18,0:18:47.93:0,48,697	0/0:25,0:25:42.68:0,43,757	0/1:22,0:22:13.41:237,0,13	1/1:20,3:23:7.35:383,7,0	0/0:11,0:11:26.75:0,27,231	0/1:20,0:20:58.70:59,0,184	0/1:12,0:12:30.91:150,0,31	0/0:35,0:33:63.44:0,63,1366	0/0:15,0:14:14.98:0,15,446	0/0:15,0:15:45.06:0,45,608	0/0:18,0:17:40.79:0,41,458	0/0:15,0:15:30.71:0,31,233	1/1:16,0:16:6:64,6,0	0/1:3,21:24:8.14:8,0,17	0/1:28,0:28:22.47:79,0,22	0/0:23,0:23:42.39:0,42,926	0/0:27,0:27:77.87:0,78,1205	0/0:15,0:15:32.88:0,33,402	0/0:4,0:4:12.01:0,12,151
chr10	50403396	.	CTT	C	2143.67	PASS	AB=1.000;AC=20;AF=0.357;AN=56;BaseQRankSum=1.689;DP=585;FS=17.393;HRun=2;HaplotypeScore=100.8159;InbreedingCoeff=0.8109;MQ=55.55;MQ0=11;MQRankSum=3.349;QD=9.66;ReadPosRankSum=2.305;VQSLOD=-0.6843;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:27:38.76:0,39,462	0/1:8,0:8:4.46:60,0,4	0/0:25,0:15:41.92:0,42,365	0/0:32,0:22:40.81:0,41,472	0/0:22,0:22:38.21:0,38,501	1/1:26,0:26:8.67:222,9,0	1/1:19,0:19:36.23:284,36,0	0/0:28,0:28:80.88:0,81,703	1/1:24,0:23:18.58:189,19,0	0/0:19,0:19:49.89:0,50,558	0/0:25,0:25:49.08:0,49,534	1/1:24,0:24:56.31:450,56,0	1/1:18,5:23:59.22:564,59,0	0/0:12,0:12:24.19:0,24,215	0/1:21,0:21:21.09:125,0,21	1/1:12,0:12:18.07:171,18,0	0/0:36,0:34:76.41:0,76,893	0/0:14,0:13:35.08:0,35,369	0/0:15,0:15:44.96:0,45,454	0/0:18,0:17:36.87:0,37,361	0/0:15,0:15:30.68:0,31,232	1/1:1,14:15:3.01:47,3,0	1/1:23,1:24:8.70:85,9,0	1/1:1,25:26:12.02:151,12,0	0/0:24,0:24:55:0,55,725	0/0:28,0:28:83.66:0,84,857	0/0:14,0:15:32.59:0,33,292	0/0:6,0:6:18:0,18,190
chr10	50404781	.	CTT	C	2609.06	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=14.973;DP=687;FS=4.198;HRun=2;HaplotypeScore=146.3231;InbreedingCoeff=0.9989;MQ=83.59;MQ0=0;MQRankSum=-14.983;QD=24.16;ReadPosRankSum=-0.460;VQSLOD=2.1941;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,32:32:84.02:805,84,0	0/0:14,0:14:42.14:0,42,853	0/0:20,0:20:60.21:0,60,1197	0/0:24,0:24:72.11:0,72,1362	0/0:38,0:38:99:0,114,2133	0/0:24,0:24:72.25:0,72,1454	0/0:28,0:28:84.29:0,84,1692	1/1:4,15:19:51.08:511,51,0	0/0:31,0:31:93.31:0,93,1853	0/0:26,0:26:78.26:0,78,1551	0/0:23,0:23:69.24:0,69,1377	0/0:31,0:31:93.26:0,93,1735	0/0:19,0:19:57.20:0,57,1150	0/0:31,0:31:93.27:0,93,1764	0/0:37,0:37:99:0,111,2219	0/0:27,0:27:81.21:0,81,1603	0/0:38,0:38:99:0,114,2299	0/0:27,0:27:81.27:0,81,1607	1/1:0,10:10:30.04:295,30,0	1/1:1,11:11:29.98:262,30,0	1/1:2,8:10:22.29:189,22,0	0/0:24,0:24:72.23:0,72,1415	0/0:20,0:20:60.18:0,60,1170	0/0:24,0:24:72.25:0,72,1447	0/0:21,0:21:63.21:0,63,1247	0/0:43,0:43:99:0,129,2549	1/1:2,23:25:75.02:735,75,0	0/0:9,0:9:27.07:0,27,510
chr10	50404784	.	G	GGTACA	8181.95	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=12.380;DP=709;FS=3.268;HRun=0;HaplotypeScore=183.5294;InbreedingCoeff=0.9967;MQ=82.34;MQ0=0;MQRankSum=-15.873;QD=60.61;ReadPosRankSum=-2.921;VQSLOD=4.6917;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,27:35:90.31:2138,90,0	0/0:17,0:17:45.13:0,45,860	0/0:22,0:22:54.19:0,54,1138	0/0:22,0:22:54.15:0,54,1090	0/0:38,0:38:99:0,111,2341	0/0:23,0:23:69.24:0,69,1431	0/0:28,0:28:84.27:0,84,1713	1/1:10,15:25:75.24:1772,75,0	0/0:31,0:31:90.30:0,90,1865	0/0:28,0:28:84.27:0,84,1714	0/0:21,0:21:60.19:0,60,1224	0/0:26,0:26:72.25:0,72,1535	0/0:21,0:21:57.20:0,57,1195	0/0:29,0:29:87.28:0,87,1779	0/0:36,0:36:99:0,99,2072	0/0:27,0:27:75.23:0,75,1522	0/0:37,0:37:99:0,99,2106	0/0:27,0:27:72.25:0,72,1520	1/1:3,10:13:39.13:997,39,0	1/1:5,11:17:36.12:836,36,0	1/1:4,8:12:18.05:351,18,0	0/0:25,0:25:69.22:0,69,1387	0/0:20,0:20:51.18:0,51,1087	0/0:22,0:22:66.20:0,66,1321	0/0:21,0:21:60.21:0,60,1258	0/0:44,0:44:99:0,129,2715	1/1:9,23:32:87.28:2088,87,0	0/0:9,0:9:18.06:0,18,373
chr10	50448551	.	A	AT	6170.59	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-15.591;DP=728;FS=0.668;HRun=6;HaplotypeScore=68.2046;InbreedingCoeff=0.9999;MQ=85.87;MQ0=0;MQRankSum=-1.972;QD=31.81;ReadPosRankSum=-0.109;VQSLOD=5.1084;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,49:57:99:1720,138,0	0/0:12,0:12:33.06:0,33,330	0/0:25,0:25:54.10:0,54,543	0/0:24,0:23:42.04:0,42,455	0/0:36,0:36:99:0,99,1003	0/0:20,0:20:51.10:0,51,514	0/0:25,0:25:63.14:0,63,643	1/1:5,34:39:99:1231,99,0	0/0:24,0:24:66.15:0,66,673	0/0:25,0:25:63.14:0,63,643	0/0:28,0:28:69.15:0,69,704	0/0:23,0:23:60.13:0,60,612	0/0:22,0:22:63.09:0,63,626	0/0:22,0:22:60.13:0,60,612	0/0:29,0:29:78.18:0,78,796	0/0:29,0:29:84.14:0,84,841	0/0:36,0:36:99:0,99,1010	0/0:22,0:22:60.14:0,60,612	1/1:2,12:14:36.11:442,36,0	1/1:2,18:20:45.14:566,45,0	1/1:5,33:38:99:1269,102,0	0/0:27,0:27:78.18:0,78,796	0/0:23,0:23:60.13:0,60,612	0/0:27,0:27:69.13:0,69,696	0/0:22,0:22:63.13:0,63,636	0/0:22,0:22:57.12:0,57,582	1/1:1,25:26:75.24:943,75,0	0/0:11,0:11:33.07:0,33,336
chr10	50448888	.	TGCC	T	505.22	PASS	AB=0.850;AC=6;AF=0.107;AN=56;BaseQRankSum=3.871;DP=733;FS=13.671;HRun=0;HaplotypeScore=154.6513;InbreedingCoeff=-0.1204;MQ=63.00;MQ0=7;MQRankSum=-3.029;QD=3.04;ReadPosRankSum=-3.148;VQSLOD=0.9444;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:30,1:31:29.87:30,0,83	0/0:12,0:12:36.12:0,36,834	0/0:28,0:20:60.20:0,60,1336	0/0:10,0:7:21.04:0,21,410	0/0:33,0:33:51.97:0,52,2014	0/0:24,0:24:72.25:0,72,1684	0/0:21,0:21:63.22:0,63,1551	0/0:35,0:35:99:0,105,2318	0/0:24,0:24:72.25:0,72,1752	0/0:32,0:32:93.63:0,94,1879	0/0:25,0:25:30.67:0,31,1392	0/0:21,0:21:50.44:0,50,1006	0/0:23,0:23:64.42:0,64,1210	0/1:14,5:19:55.90:56,0,840	0/0:30,0:30:90.31:0,90,2205	0/0:32,0:32:87.27:0,87,1725	0/0:34,1:35:59.05:0,59,1661	0/0:20,3:23:20.95:0,21,1330	0/1:18,3:21:44:44,0,1057	0/0:27,8:35:61.86:0,62,1543	0/1:17,2:19:54.39:54,0,735	0/0:25,0:25:60.19:0,60,1122	0/0:28,0:28:84.23:0,84,1916	0/0:25,0:25:59.69:0,60,1171	0/0:31,0:31:68.12:0,68,1388	0/1:28,5:33:98.46:98,0,1754	0/1:24,19:43:99:347,0,1560	0/0:15,0:15:39.13:0,39,819
chr10	50448891	.	CATCT	C	1863.83	PASS	AB=1.000;AC=11;AF=0.212;AN=52;BaseQRankSum=-0.140;DP=751;FS=0.622;HRun=0;HaplotypeScore=168.0838;InbreedingCoeff=0.7863;MQ=61.66;MQ0=7;MQRankSum=1.493;QD=12.18;ReadPosRankSum=1.597;VQSLOD=3.0049;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:5.03:0,5,30	0/0:10,0:13:12.02:0,12,178	./.	./.	0/0:24,0:34:33.09:0,33,531	0/0:24,0:24:30.10:0,30,674	0/0:22,0:22:27.09:0,27,578	0/0:39,0:39:4.98:0,5,13	0/0:26,0:26:36.12:0,36,810	0/0:18,0:33:51.16:0,51,833	0/0:17,0:27:20.10:0,20,298	1/1:11,11:22:20.75:318,21,0	1/1:12,10:23:30.10:456,30,0	0/0:17,0:17:5.90:0,6,37	0/0:32,0:32:48.15:0,48,1066	1/1:17,15:32:33.11:502,33,0	0/0:17,0:34:45.15:0,45,784	0/0:24,0:24:37.27:0,37,698	0/1:25,0:25:7.40:7,0,52	0/0:36,0:36:16.91:0,17,286	0/0:18,0:18:2.73:0,3,8	1/1:9,16:25:33.07:476,33,0	0/0:26,0:26:27.08:0,27,548	1/1:13,13:26:18.06:274,18,0	0/0:21,0:38:16.33:0,16,324	0/0:30,0:31:35.48:0,35,538	0/0:43,0:43:33.83:0,34,401	0/0:10,0:16:16.30:0,16,275
chr10	50448896	.	A	ATCTGTCTG	5712.34	PASS	AB=1.000;AC=14;AF=0.250;AN=56;BaseQRankSum=-1.189;DP=759;FS=17.207;HRun=0;HaplotypeScore=212.3809;InbreedingCoeff=0.4095;MQ=59.51;MQ0=9;MQRankSum=-7.216;QD=18.43;ReadPosRankSum=-2.914;VQSLOD=2.6704;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:1,34:37:3.01:87,3,0	0/0:14,0:14:38.07:0,38,514	0/0:20,0:12:30.05:0,30,409	0/0:8,0:5:9.03:0,9,165	0/0:35,0:35:82.05:0,82,1084	0/0:23,0:23:63.18:0,63,1275	0/0:21,0:21:60.19:0,60,1196	1/1:53,0:51:99:1900,126,0	0/0:26,0:26:72.19:0,72,1454	0/0:33,0:33:66.48:0,66,968	0/0:27,0:27:65.86:0,66,851	0/0:21,0:21:45.63:0,46,844	0/0:24,0:24:63.17:0,63,1101	0/1:20,0:20:81.59:82,0,525	0/0:30,0:30:84.27:0,84,1870	0/0:30,0:30:78.20:0,78,1277	0/0:34,0:34:79.17:0,79,813	0/0:26,0:26:13.11:0,13,1150	0/1:27,0:26:40.79:739,0,41	1/1:35,0:35:12.36:941,12,0	0/1:16,0:16:3.28:287,0,3	0/0:24,0:24:54.18:0,54,988	0/0:27,0:27:78.25:0,78,1429	0/0:26,0:26:50.94:0,51,849	0/1:38,0:38:99:364,0,632	0/1:30,0:30:99:130,0,811	1/1:41,0:41:48.71:1010,49,0	0/1:13,0:13:99:174,0,213
chr10	50449267	.	T	TTGA	11343.82	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-13.343;DP=690;FS=1.875;HRun=0;HaplotypeScore=89.2408;InbreedingCoeff=0.9998;MQ=80.40;MQ0=1;MQRankSum=-6.217;QD=67.12;ReadPosRankSum=-0.721;VQSLOD=5.9259;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,31:36:90.31:2217,90,0	0/0:14,0:14:42.14:0,42,779	0/0:26,0:26:77.99:0,78,1342	0/0:32,0:31:73.89:0,74,1523	0/0:28,0:28:81.26:0,81,1466	0/0:25,0:25:75.24:0,75,1348	0/0:19,0:19:57.20:0,57,1052	1/1:2,30:34:99:2415,102,0	0/0:23,0:23:69.21:0,69,1243	0/0:25,0:25:72.24:0,72,1288	0/0:21,0:21:60.21:0,60,1118	0/0:20,0:20:60.21:0,60,1111	0/0:26,0:26:75.26:0,75,1387	0/0:24,0:24:72.25:0,72,1321	0/0:28,0:28:84.29:0,84,1566	0/0:27,0:27:81.27:0,81,1478	0/0:27,0:27:81.25:0,81,1476	0/0:16,0:16:45.15:0,45,839	1/1:2,17:24:72.24:1605,72,0	1/1:1,28:29:84.25:2009,84,0	1/1:0,25:25:66.23:1619,66,0	0/0:26,0:26:78.27:0,78,1441	0/0:25,0:25:75.24:0,75,1366	0/0:38,0:38:99:0,111,2035	0/0:21,0:21:63.22:0,63,1173	0/0:21,0:21:63.22:0,63,1175	1/1:0,20:21:60.21:1478,60,0	0/0:9,0:9:27.09:0,27,499
chr10	50451183	.	GT	G	2330.86	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=2.303;DP=700;FS=6.465;HRun=10;HaplotypeScore=149.6696;InbreedingCoeff=0.9380;MQ=61.41;MQ0=4;MQRankSum=-5.250;QD=18.95;ReadPosRankSum=-3.522;VQSLOD=1.8010;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:58:99:0,119,1439	0/0:11,0:16:37.39:0,37,204	0/0:20,0:12:16.73:0,17,145	0/0:24,0:18:0.20:0,0,147	0/0:28,0:28:83.90:0,84,907	0/0:14,0:15:37.17:0,37,207	0/0:13,0:22:48.29:0,48,241	1/1:10,24:34:74.98:650,75,0	0/0:9,0:12:32.58:0,33,163	0/0:35,0:36:99:0,99,1071	0/0:33,0:36:83.89:0,84,891	0/0:7,0:21:46.72:0,47,234	0/0:9,0:23:52.41:0,52,272	0/0:15,0:15:42.11:0,42,457	0/0:18,0:28:61.46:0,61,335	0/0:20,0:29:73.13:0,73,396	0/0:41,0:42:98.74:0,99,1026	0/0:19,0:19:36.06:0,36,384	1/1:6,10:15:29.99:260,30,0	1/1:7,26:32:89.90:764,90,0	1/1:3,9:12:26.99:234,27,0	0/0:8,0:22:55.44:0,55,285	0/0:7,0:22:50.63:0,51,246	0/0:6,0:14:19.92:0,20,106	0/0:19,1:20:22.07:0,22,472	0/0:35,1:36:70.19:0,70,993	1/1:8,20:28:68.96:596,69,0	0/0:16,0:16:42.11:0,42,464
chr10	50451200	.	TC	T	1282.81	PASS	AB=0.994;AC=21;AF=0.375;AN=56;BaseQRankSum=14.455;DP=644;FS=6.295;HRun=1;HaplotypeScore=136.8247;InbreedingCoeff=-0.0060;MQ=58.39;MQ0=6;MQRankSum=-7.627;QD=3.34;ReadPosRankSum=6.364;VQSLOD=0.2062;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:46,0:45:38.61:177,39,0	0/1:15,0:14:39.71:40,0,79	0/0:13,0:6:12.20:0,12,95	0/0:20,1:15:13.72:0,14,143	0/0:36,0:36:99:0,99,1149	1/1:14,0:14:4.64:49,5,0	0/1:20,0:20:23.28:23,0,109	0/1:29,0:28:87.05:87,0,141	1/1:15,0:15:26.73:90,27,0	0/0:28,0:28:84.25:0,84,1037	0/0:32,0:32:93.13:0,93,1074	0/1:24,0:24:15.29:123,0,15	0/1:22,0:21:34.01:98,0,34	0/0:19,0:19:54.11:0,54,622	0/1:27,0:26:46.09:78,0,46	0/1:26,1:27:7.66:119,0,8	0/0:34,0:34:99:0,102,1225	0/0:14,0:14:15.86:0,16,412	0/1:11,0:11:43.39:43,0,49	0/1:35,0:34:99:127,0,110	0/1:11,0:11:15.89:16,0,50	0/1:24,0:24:62.92:73,0,63	0/1:22,1:23:32.17:141,0,32	1/1:18,1:18:15.88:108,16,0	0/0:15,0:15:37.08:0,37,452	0/0:34,0:34:99:0,102,1226	0/1:22,0:21:69.14:69,0,116	0/0:14,0:14:39.05:0,39,430
chr10	50451201	.	CT	C	6859.62	PASS	AB=0.875;AC=33;AF=0.589;AN=56;BaseQRankSum=15.612;DP=642;FS=3.452;HRun=8;HaplotypeScore=119.2108;InbreedingCoeff=0.9174;MQ=58.39;MQ0=6;MQRankSum=-6.600;QD=18.05;ReadPosRankSum=1.899;VQSLOD=4.0333;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,45:45:99:1129,117,0	0/1:12,2:13:6.18:224,0,6	0/0:13,0:6:8.52:0,9,52	0/0:21,0:15:18:0,18,168	0/0:37,0:37:93.22:0,93,1056	1/1:11,3:14:35.95:347,36,0	1/1:13,5:18:30.04:289,30,0	1/1:12,17:28:51.07:492,51,0	1/1:9,5:14:36.05:345,36,0	0/0:28,0:28:78.23:0,78,932	0/0:32,0:32:78.24:0,78,941	1/1:6,18:24:29.12:414,29,0	1/1:8,14:21:27.84:310,28,0	0/0:20,0:20:48.13:0,48,568	1/1:14,13:26:60.08:577,60,0	1/1:14,13:27:69.07:659,69,0	0/0:34,0:34:96.27:0,96,1137	0/0:13,0:14:33.57:0,34,399	1/1:3,8:11:23.98:222,24,0	1/1:7,28:34:54.07:521,54,0	1/1:3,8:11:14.95:127,15,0	1/1:6,18:24:19.80:276,20,0	1/1:9,14:23:15.24:264,15,0	1/1:4,15:18:39.05:374,39,0	0/0:14,1:15:10.14:0,10,402	0/0:34,0:34:90.28:0,90,1087	1/1:8,14:22:30.02:289,30,0	0/0:14,0:14:33.07:0,33,383
chr10	50452581	.	CA	C	1494.49	PASS	AB=0.898;AC=21;AF=0.375;AN=56;BaseQRankSum=13.871;DP=471;FS=0.356;HRun=1;HaplotypeScore=92.3897;InbreedingCoeff=-0.0346;MQ=73.70;MQ0=0;MQRankSum=-0.735;QD=4.68;ReadPosRankSum=4.864;VQSLOD=0.4351;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:21,4:25:21.62:149,0,22	0/1:13,3:16:12.71:137,0,13	0/0:17,0:17:34.92:0,35,425	0/0:11,1:12:20.01:0,20,253	0/0:10,0:10:27.09:0,27,386	0/1:10,1:11:4.28:40,0,4	0/1:20,0:20:51.53:64,0,52	0/1:34,3:37:72.65:73,0,194	0/1:14,3:17:8.23:109,0,8	0/0:14,0:14:41.82:0,42,449	0/0:15,0:15:45.15:0,45,643	1/1:10,5:15:21.13:211,21,0	0/1:15,3:18:15.48:128,0,15	0/0:17,0:17:47.82:0,48,571	0/1:20,2:22:2.25:118,0,2	0/1:13,4:17:37.27:167,0,37	0/0:27,0:27:81.22:0,81,1077	0/0:15,0:15:45.14:0,45,622	0/1:13,2:15:13.55:53,0,14	0/1:10,1:11:8.97:18,0,9	0/1:19,1:20:53.24:53,0,78	0/1:15,1:16:24.36:26,0,24	0/1:14,1:15:16.37:16,0,29	1/1:10,1:11:22.45:92,22,0	0/0:13,0:13:39.06:0,39,464	0/0:12,0:12:36.12:0,36,505	1/1:26,1:27:15.91:211,16,0	0/1:5,1:6:5.01:5,0,177
chr10	50452582	.	AC	A	7139.37	PASS	AB=1.000;AC=35;AF=0.625;AN=56;BaseQRankSum=12.189;DP=476;FS=2.291;HRun=8;HaplotypeScore=78.7613;InbreedingCoeff=0.9207;MQ=73.53;MQ0=0;MQRankSum=-0.646;QD=22.31;ReadPosRankSum=-0.535;VQSLOD=5.1028;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,17:25:57.09:549,57,0	1/1:5,11:16:38.96:362,39,0	0/0:16,1:17:32.08:0,32,340	0/0:9,0:12:9.39:0,9,76	0/0:11,0:11:30.08:0,30,351	1/1:3,9:12:30.05:289,30,0	1/1:3,16:19:45.07:434,45,0	1/1:11,25:36:78.08:735,78,0	1/1:5,12:17:42.06:405,42,0	0/0:12,0:13:26.95:0,27,304	0/0:17,0:17:45.14:0,45,544	1/1:7,9:16:45.07:431,45,0	1/1:7,12:19:42.05:402,42,0	0/0:17,0:17:48.13:0,48,570	1/1:4,18:22:60.10:579,60,0	1/1:7,8:15:41.99:385,42,0	0/0:27,0:27:72.22:0,72,870	0/0:16,0:16:42.13:0,42,507	1/1:3,11:14:39.03:363,39,0	1/1:3,8:11:24.04:230,24,0	1/1:7,14:21:36.04:345,36,0	1/1:4,13:17:36.05:347,36,0	1/1:5,11:16:27.03:261,27,0	1/1:1,10:11:30.05:289,30,0	0/0:13,0:13:33.10:0,33,398	0/0:13,0:13:39.11:0,39,461	1/1:3,24:27:75.12:722,75,0	0/1:6,0:6:10.85:11,0,161
chr10	50453309	.	T	TTA	12277.41	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-13.664;DP=487;FS=1.585;HRun=0;HaplotypeScore=49.8319;InbreedingCoeff=0.9901;MQ=68.07;MQ0=1;MQRankSum=0.339;QD=42.78;ReadPosRankSum=0.556;VQSLOD=6.2230;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,10:13:30.10:531,30,0	1/1:1,6:7:15.05:266,15,0	0/0:17,0:17:48.16:0,48,653	0/0:16,0:16:38.80:0,39,504	0/0:32,0:32:90.26:0,90,1186	1/1:3,19:22:60.21:1063,60,0	1/1:1,13:14:33.11:585,33,0	1/1:5,28:33:84.25:1415,84,0	1/1:1,10:11:27.09:479,27,0	0/0:21,0:20:60.19:0,60,809	0/0:22,0:22:63.20:0,63,848	1/1:4,20:24:51.17:905,51,0	1/1:1,14:15:39.13:692,39,0	0/0:17,0:17:51.16:0,51,684	1/1:1,14:15:39.13:692,39,0	1/1:0,16:16:45.15:798,45,0	0/0:22,0:22:63.18:0,63,846	0/0:11,0:11:10.17:0,10,349	1/1:1,18:20:57.18:982,57,0	1/1:3,18:22:54.18:942,54,0	1/1:0,16:16:36.12:639,36,0	1/1:0,11:12:30.10:532,30,0	1/1:2,10:13:27.09:479,27,0	1/1:1,9:10:24.08:426,24,0	0/0:11,0:11:30.09:0,30,396	0/0:22,0:22:60.17:0,60,781	1/1:3,21:23:48.16:851,48,0	0/0:9,0:9:27.09:0,27,371
chr10	50453768	.	G	GT	508.97	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=0.840;DP=609;FS=0.000;HRun=4;HaplotypeScore=61.4704;InbreedingCoeff=0.9897;MQ=70.38;MQ0=0;MQRankSum=-2.342;QD=25.45;ReadPosRankSum=-0.041;VQSLOD=2.1671;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,14:20:39.52:604,40,0	0/0:7,0:7:18.05:0,18,204	0/0:20,0:18:48.11:0,48,522	0/0:20,0:20:43.25:0,43,442	0/0:31,0:31:93.25:0,93,1044	0/0:23,0:23:60.15:0,60,671	0/0:13,0:13:39.11:0,39,442	0/0:31,0:31:78.20:0,78,868	0/0:22,0:22:60.11:0,60,640	0/0:26,0:26:72.20:0,72,816	0/0:32,0:32:78.18:0,78,872	0/0:12,0:12:36.10:0,36,408	0/0:27,0:27:69.19:0,69,782	0/0:22,0:22:63.16:0,63,704	0/0:21,0:21:54.14:0,54,603	0/0:21,0:21:60.17:0,60,681	0/0:28,0:28:84.24:0,84,951	0/0:23,0:23:57.11:0,57,622	0/0:22,0:22:57.16:0,57,647	0/0:27,0:27:78.22:0,78,880	0/0:14,0:14:41.97:0,42,447	0/0:17,0:17:45.11:0,45,499	0/0:26,0:26:78.21:0,78,874	0/0:24,0:24:66.14:0,66,737	0/0:17,0:17:51.15:0,51,579	0/0:26,0:26:75.20:0,75,841	0/0:29,0:28:75.21:0,75,851	0/0:8,0:8:24.07:0,24,272
chr10	50454344	.	TG	T	4373.68	PASS	AB=0.991;AC=27;AF=0.482;AN=56;BaseQRankSum=6.506;DP=554;FS=1.072;HRun=2;HaplotypeScore=82.7905;InbreedingCoeff=0.6821;MQ=64.68;MQ0=0;MQRankSum=1.097;QD=14.63;ReadPosRankSum=0.247;VQSLOD=4.3347;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:12.49:0,12,176	1/1:3,0:3:8.58:51,9,0	0/0:14,0:14:35.23:0,35,499	0/0:14,0:13:38.47:0,38,423	0/0:36,0:36:99:0,105,1502	1/1:12,1:13:36.92:196,37,0	1/1:16,0:16:36.55:182,37,0	0/1:21,1:22:62.94:75,0,63	1/1:14,0:14:38.72:195,39,0	0/0:27,0:27:78.23:0,78,1118	0/0:27,0:27:81.22:0,81,1093	1/1:0,19:19:51.17:660,51,0	1/1:0,17:17:45.10:582,45,0	0/0:13,0:13:39.10:0,39,541	1/1:28,0:28:69.06:325,69,0	1/1:17,0:17:33.30:181,33,0	0/0:22,0:22:63.19:0,63,899	0/0:24,0:24:66.18:0,66,941	0/1:25,0:25:65.15:65,0,80	0/1:19,0:19:12.48:12,0,77	0/1:19,0:19:1.90:2,0,114	1/1:1,18:19:51.04:619,51,0	1/1:1,22:23:60.15:757,60,0	1/1:0,14:14:36.12:466,36,0	0/0:24,0:24:69.22:0,69,1009	0/0:33,0:33:99:0,99,1384	0/1:31,0:31:3.54:4,0,162	0/0:7,0:7:21.05:0,21,292
chr10	50454345	.	G	GT	2307.66	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=1.175;DP=558;FS=1.431;HRun=2;HaplotypeScore=91.2112;InbreedingCoeff=0.9279;MQ=64.67;MQ0=0;MQRankSum=1.497;QD=24.81;ReadPosRankSum=1.164;VQSLOD=3.4989;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:12.84:0,13,159	1/1:1,2:3:4.96:65,5,0	0/0:14,0:14:18.12:0,18,446	0/0:14,0:13:38.91:0,39,486	0/0:35,0:35:99:0,105,1464	1/1:4,10:14:30.38:368,30,0	1/1:2,14:16:35.04:399,35,0	0/0:22,0:22:22.89:0,23,205	1/1:3,12:15:33.99:396,34,0	0/0:28,0:28:78.26:0,78,1086	0/0:28,0:28:81.26:0,81,1104	0/0:19,0:19:26.43:0,26,70	0/0:17,0:17:23.32:0,23,62	0/0:13,0:13:39.13:0,39,544	1/1:2,26:28:73.61:818,74,0	1/1:3,14:17:29.17:443,29,0	0/0:22,0:22:63.19:0,63,862	0/0:24,0:24:66.22:0,66,918	0/0:24,1:25:3.17:0,3,226	0/0:20,0:20:38.49:0,38,210	0/0:19,0:19:50.35:0,50,290	0/0:18,0:18:24.57:0,25,65	0/0:22,0:23:31.36:0,31,83	0/0:14,0:14:15.25:0,15,42	0/0:25,0:25:69.23:0,69,964	0/0:33,0:33:99:0,99,1347	0/0:31,0:31:73.43:0,73,410	0/0:7,0:7:21.05:0,21,276
chr10	50454346	.	G	GTTT	1321.44	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=9.472;DP=557;FS=5.373;HRun=8;HaplotypeScore=116.9968;InbreedingCoeff=0.9452;MQ=65.53;MQ0=0;MQRankSum=1.119;QD=12.24;ReadPosRankSum=-0.063;VQSLOD=0.3029;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:3,11:14:27.09:545,27,0	1/1:3,0:3:5.48:25,5,0	0/0:15,0:15:33.05:0,33,412	0/0:14,0:13:26.02:0,26,304	0/0:36,0:36:93.25:0,93,1207	1/1:15,0:15:33.37:165,33,0	1/1:16,0:16:33.09:149,33,0	0/0:22,0:22:50.02:0,50,451	1/1:15,0:15:35.31:166,35,0	0/0:28,0:28:72.19:0,72,934	0/0:27,0:27:69.17:0,69,889	0/0:19,0:19:50.83:0,51,399	0/0:17,0:17:44.82:0,45,348	0/0:13,0:13:33.06:0,33,390	1/1:28,0:28:68.53:315,69,0	1/1:17,0:17:11.73:149,12,0	0/0:21,0:21:57.16:0,57,749	0/0:24,0:24:63.15:0,63,806	0/0:24,0:24:51.27:0,51,536	0/0:20,0:20:4.33:0,4,342	0/0:19,0:19:51.02:0,51,503	0/0:18,0:18:44.82:0,45,348	0/0:23,0:23:59.75:0,60,463	0/0:14,0:14:35.86:0,36,281	0/0:25,0:25:69.17:0,69,875	0/0:33,0:33:93.30:0,93,1215	0/0:31,0:31:74.71:0,75,742	0/0:6,0:6:18.06:0,18,237
chr10	50454417	.	A	AT	2606.53	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-8.760;DP=601;FS=0.865;HRun=10;HaplotypeScore=73.4406;InbreedingCoeff=0.9233;MQ=63.12;MQ0=0;MQRankSum=0.103;QD=21.02;ReadPosRankSum=-2.202;VQSLOD=3.7412;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:44.88:0,45,365	0/0:9,0:9:26.97:0,27,222	0/0:13,0:11:22.96:0,23,172	0/0:8,0:8:11.97:0,12,98	0/0:41,2:45:50.95:0,51,810	0/0:18,0:18:52.94:0,53,418	0/0:18,0:18:23.87:0,24,345	1/1:7,21:28:66.06:665,66,0	0/0:14,0:14:38.95:0,39,320	0/0:28,0:28:62.89:0,63,517	0/0:27,0:27:68.88:0,69,561	0/0:19,0:19:41.92:0,42,345	0/0:22,0:22:56.93:0,57,468	0/0:17,0:17:41.93:0,42,345	0/0:19,0:19:38.93:0,39,320	0/0:23,1:24:21.91:0,22,386	0/0:26,0:26:63:0,63,532	0/0:19,0:20:43.95:0,44,350	1/1:3,25:28:69.17:735,69,0	1/1:3,24:27:23.05:643,23,0	1/1:2,11:13:8.44:295,8,0	0/0:14,0:17:45.05:0,45,338	0/0:25,0:25:59.91:0,60,492	0/0:22,0:22:56.91:0,57,467	0/0:20,0:21:49.95:0,50,400	0/0:34,0:34:80.88:0,81,662	1/1:6,22:28:1.84:431,2,0	0/0:10,0:10:23.96:0,24,197
chr10	50454980	.	GT	G	9527.15	PASS	AB=0.864;AC=55;AF=0.982;AN=56;BaseQRankSum=3.073;DP=545;FS=1.389;HRun=1;HaplotypeScore=157.2429;InbreedingCoeff=-0.0230;MQ=67.49;MQ0=0;MQRankSum=-2.318;QD=17.48;ReadPosRankSum=4.927;VQSLOD=5.3038;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:18:44.34:298,44,0	1/1:4,0:4:11.89:87,12,0	1/1:20,0:20:22.70:188,23,0	0/1:16,3:19:33.73:127,0,34	1/1:29,0:29:52.04:499,52,0	1/1:24,0:24:71.11:500,71,0	1/1:21,0:21:61.84:411,62,0	1/1:37,0:37:99:520,105,0	1/1:21,0:21:38.40:403,38,0	1/1:25,0:25:65.90:380,66,0	1/1:14,0:14:41.58:308,42,0	1/1:9,0:9:26.60:179,27,0	1/1:25,0:25:51.05:446,51,0	1/1:17,0:17:50.47:369,50,0	1/1:26,0:26:73.67:489,74,0	1/1:13,0:13:13.50:220,14,0	1/1:8,0:8:17.92:138,18,0	1/1:9,1:10:26.75:204,27,0	1/1:23,0:23:66.83:397,67,0	1/1:25,0:25:42.60:433,43,0	1/1:14,0:14:35.69:265,36,0	1/1:28,0:28:76.71:512,77,0	1/1:27,0:27:74.38:523,74,0	1/1:12,0:12:32.72:244,33,0	1/1:23,0:23:68:469,68,0	1/1:22,0:22:61.05:376,61,0	1/1:25,0:25:70.88:486,71,0	1/1:5,1:6:8.29:57,8,0
chr10	50455470	.	AGTGTGTGTGT	A	3947.86	PASS	AB=0.789;AC=23;AF=0.411;AN=56;BaseQRankSum=7.794;DP=511;FS=4.710;HRun=0;HaplotypeScore=162.7176;InbreedingCoeff=0.6241;MQ=54.72;MQ0=12;MQRankSum=-8.708;QD=18.80;ReadPosRankSum=1.529;VQSLOD=2.2036;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:9:7.99:0,8,68	1/1:3,0:6:3:30,3,0	0/0:36,0:22:5.23:0,5,51	0/0:36,0:16:6.49:0,6,141	0/0:25,0:24:36.11:0,36,1243	1/1:8,11:19:9.03:267,9,0	1/1:11,2:13:6.02:120,6,0	0/0:16,0:18:17.97:0,18,245	1/1:7,13:20:30.10:889,30,0	0/0:20,0:20:34.66:0,35,1314	0/0:22,0:23:27.09:0,27,1194	0/1:15,0:23:49.94:331,0,50	1/1:9,0:20:24.08:558,24,0	0/0:16,0:16:36.12:0,36,1470	1/1:5,1:14:7.76:287,8,0	1/1:4,0:7:9.02:111,9,0	0/0:8,0:12:12.04:0,12,518	0/0:16,0:18:30.10:0,30,1107	0/1:14,0:15:14.69:15,0,146	0/1:12,1:22:41.52:134,0,42	0/0:14,0:13:8.70:0,9,88	1/1:8,0:24:36.12:837,36,0	1/1:10,0:16:15.02:349,15,0	1/1:10,0:9:2.96:19,3,0	0/0:21,0:23:56.49:0,56,2199	0/0:14,0:14:12.04:0,12,445	0/0:14,0:22:18.74:0,19,100	0/0:14,0:13:23.65:0,24,760
chr10	50455853	.	TA	T	11152.22	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=14.250;DP=562;FS=14.050;HRun=3;HaplotypeScore=79.9064;InbreedingCoeff=0.9987;MQ=67.02;MQ0=2;MQRankSum=0.324;QD=33.39;ReadPosRankSum=-0.249;VQSLOD=3.6334;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,17:17:48.15:594,48,0	1/1:0,6:6:17.95:202,18,0	0/0:19,0:17:46.38:0,46,595	0/0:15,0:15:36.05:0,36,462	0/0:29,0:29:84.27:0,84,1192	1/1:0,19:19:42.13:520,42,0	1/1:1,12:13:33.10:409,33,0	1/1:1,36:36:99:1249,105,0	1/1:0,23:23:66.21:817,66,0	0/0:29,0:29:84.27:0,84,1180	0/0:21,0:21:51.17:0,51,734	1/1:0,14:14:39.12:483,39,0	1/1:0,16:16:42.13:520,42,0	0/0:15,0:15:42.14:0,42,605	1/1:0,26:26:75.24:929,75,0	1/1:0,24:24:66.21:817,66,0	0/0:22,0:22:62.32:0,62,824	0/0:17,0:17:51.17:0,51,732	1/1:2,15:15:39.10:467,39,0	1/1:0,26:26:72.12:856,72,0	1/1:0,18:18:51.16:631,51,0	1/1:0,14:14:42.09:502,42,0	1/1:2,19:21:54.17:668,54,0	1/1:1,18:19:54.08:634,54,0	0/0:23,0:23:69.22:0,69,973	0/0:22,0:22:63.21:0,63,892	1/1:0,24:24:69.22:853,69,0	0/0:16,0:16:45.15:0,45,647
chr10	50457215	.	A	AC	18892.39	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=8.425;DP=652;FS=6.617;HRun=0;HaplotypeScore=91.8359;InbreedingCoeff=0.9976;MQ=88.53;MQ0=0;MQRankSum=-3.010;QD=42.94;ReadPosRankSum=3.653;VQSLOD=5.1620;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,44:44:99:1964,123,0	1/1:0,11:11:30.10:479,30,0	0/0:24,0:24:68.98:0,69,821	0/0:22,0:22:62.48:0,62,735	0/0:21,0:21:63.19:0,63,861	1/1:1,17:18:51.17:815,51,0	1/1:1,17:18:45.15:719,45,0	1/1:1,40:41:99:1887,120,0	1/1:1,21:22:60.20:959,60,0	0/0:23,0:23:66.21:0,66,906	0/0:17,0:17:51.16:0,51,696	1/1:1,24:25:69.15:1071,69,0	1/1:1,20:21:57.19:910,57,0	0/0:29,0:29:87.26:0,87,1175	1/1:0,23:23:60.20:959,60,0	1/1:0,33:33:90.31:1438,90,0	0/0:16,0:16:48.16:0,48,671	0/0:13,0:13:36.12:0,36,501	1/1:0,20:20:60.17:911,60,0	1/1:0,31:31:87.29:1366,87,0	1/1:0,22:22:57.19:911,57,0	1/1:0,29:29:78.18:1200,78,0	1/1:0,27:27:65.67:1054,66,0	1/1:0,20:20:51.17:815,51,0	0/0:20,0:20:60.16:0,60,815	0/0:22,0:22:63.19:0,63,862	1/1:1,34:35:90.31:1435,90,0	0/0:5,0:5:15.05:0,15,208
chr10	50459488	.	A	AGTTGTCCACGTTCTTTAGTA	26574.08	PASS	AB=0.940;AC=50;AF=0.893;AN=56;BaseQRankSum=-3.104;DP=192;FS=4.309;HRun=0;HaplotypeScore=231.4696;InbreedingCoeff=-0.1513;MQ=72.70;MQ0=0;MQRankSum=-0.912;QD=138.41;ReadPosRankSum=-2.182;VQSLOD=4.3062;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,0:7:17.84:518,18,0	1/1:3,0:3:3.01:241,3,0	0/1:5,0:1:20.27:20,0,63	0/1:4,1:8:8.18:1180,0,8	1/1:10,0:10:27.09:1075,27,0	1/1:5,0:5:15.05:936,15,0	1/1:4,0:4:12.04:794,12,0	1/1:11,0:11:24.08:1290,24,0	1/1:3,0:3:9.03:524,9,0	1/1:9,0:9:24.08:1881,24,0	1/1:11,0:11:33.11:2038,33,0	0/1:8,0:8:8.86:851,0,9	1/1:3,0:3:6.02:467,6,0	1/1:5,0:5:15.05:713,15,0	1/1:2,0:2:3.01:223,3,0	1/1:9,0:9:17.81:1222,18,0	1/1:7,0:7:14.84:891,15,0	0/1:5,0:5:43.32:820,0,43	0/1:10,0:10:38.53:1004,0,39	1/1:10,0:10:30.10:1904,30,0	1/1:3,0:3:6.02:286,6,0	1/1:7,0:7:14.85:1048,15,0	1/1:8,0:8:24.08:1398,24,0	1/1:6,0:6:8.82:426,9,0	1/1:9,0:9:27.09:1478,27,0	1/1:13,0:13:10.47:1967,10,0	1/1:3,0:3:9.03:419,9,0	0/1:7,0:7:76.41:960,0,76
chr10	50459532	.	A	AC	2385.55	PASS	AB=1.000;AC=31;AF=0.574;AN=54;BaseQRankSum=-0.314;DP=289;FS=21.202;HRun=5;HaplotypeScore=115.8617;InbreedingCoeff=0.8540;MQ=80.05;MQ0=3;MQRankSum=-4.914;QD=18.64;ReadPosRankSum=0.116;VQSLOD=2.1243;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,1:6:6.02:79,6,0	1/1:0,3:3:3.01:39,3,0	0/0:32,0:20:12.99:0,13,341	0/0:27,0:14:19.15:0,19,141	0/0:13,0:13:38.98:0,39,381	1/1:4,2:6:17.67:126,18,0	1/1:2,2:4:5.95:57,6,0	1/1:19,5:24:56.86:544,57,0	1/1:2,1:3:8.88:74,9,0	0/0:12,0:12:36.03:0,36,363	0/0:11,0:11:29.80:0,30,244	1/1:3,5:8:11.95:134,12,0	1/1:1,3:4:8.88:74,9,0	0/0:5,0:5:14.88:0,15,112	1/1:0,2:2:2.94:18,3,0	1/1:7,7:14:32.58:278,33,0	0/0:14,0:14:39.05:0,39,405	0/0:13,0:13:35.98:0,36,360	1/1:12,10:22:47.91:515,48,0	1/1:4,6:10:26.93:309,27,0	./.	1/1:1,5:6:14.61:144,15,0	1/1:6,2:8:17.63:123,18,0	0/1:4,0:4:0:0,0,0	0/0:10,0:10:29.95:0,30,284	0/0:15,0:15:38.90:0,39,356	1/1:3,1:4:10.43:78,10,0	0/0:7,0:7:21.02:0,21,214
chr10	50459539	.	TTTTTA	T	2435.01	PASS	AB=1.000;AC=29;AF=0.580;AN=50;BaseQRankSum=6.765;DP=272;FS=17.135;HRun=0;HaplotypeScore=95.9146;InbreedingCoeff=0.7598;MQ=78.64;MQ0=8;MQRankSum=-4.906;QD=18.59;ReadPosRankSum=-0.519;VQSLOD=2.0739;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,1:3:5.95:43,6,0	1/1:3,0:3:2.98:21,3,0	0/1:31,0:18:6.96:7,0,327	0/0:39,0:18:17.88:0,18,265	0/0:12,0:12:30.08:0,30,569	1/1:3,3:6:12.01:205,12,0	1/1:2,0:2:2.98:21,3,0	1/1:11,7:18:41.14:634,41,0	1/1:2,1:3:5.99:82,6,0	0/0:12,0:12:30.08:0,30,510	0/0:10,0:10:12.03:0,12,208	1/1:6,1:6:11.93:124,12,0	1/1:3,1:4:5.99:83,6,0	0/0:5,0:5:6.01:0,6,107	./.	1/1:6,6:12:29.97:453,30,0	0/0:14,0:14:39.12:0,39,1035	0/0:12,0:12:30.10:0,30,890	1/1:12,5:15:43.13:452,43,0	1/1:9,0:9:20.82:147,21,0	./.	1/1:5,1:6:11.96:128,12,0	1/1:6,0:6:2.98:22,3,0	./.	0/0:10,0:10:21.05:0,21,390	0/0:14,0:14:24.07:0,24,511	1/1:1,3:4:12:204,12,0	0/0:9,0:9:27.07:0,27,508
chr10	50459579	.	A	AT	720.32	PASS	AB=0.714;AC=19;AF=0.452;AN=42;BaseQRankSum=-0.254;DP=128;FS=13.048;HRun=7;HaplotypeScore=34.6498;InbreedingCoeff=0.4933;MQ=39.57;MQ0=1;MQRankSum=-4.035;QD=18.01;ReadPosRankSum=-0.608;VQSLOD=1.6880;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:1,0:1:2.60:0,3,10	1/1:0,1:1:3.01:36,3,0	0/0:13,0:5:2.98:0,3,23	0/0:18,0:6:5.72:0,6,32	0/0:3,0:3:9.01:0,9,87	0/1:3,2:5:16.89:81,0,17	./.	1/1:4,8:11:24.07:289,24,0	./.	0/0:1,0:1:3:0,3,29	./.	./.	1/1:0,2:2:3.01:36,3,0	0/0:1,0:1:3:0,3,29	./.	1/1:0,6:6:18.05:214,18,0	0/0:19,0:19:51.08:0,51,492	0/0:15,0:15:42.06:0,42,404	1/1:8,0:8:6.02:69,6,0	1/1:0,1:1:3.01:36,3,0	./.	1/1:0,1:1:3.01:31,3,0	1/1:0,1:1:3.01:36,3,0	./.	0/0:4,0:4:6.01:0,6,58	0/0:2,0:2:6.01:0,6,57	1/1:2,1:3:3.01:36,3,0	0/0:7,0:7:18.03:0,18,174
chr10	50459645	.	C	CA	1409.99	PASS	AC=24;AF=0.857;AN=28;BaseQRankSum=-0.893;DP=62;FS=7.404;HRun=0;HaplotypeScore=8.8383;InbreedingCoeff=0.2450;MQ=47.27;MQ0=10;MQRankSum=-0.473;QD=32.05;ReadPosRankSum=1.523;VQSLOD=2.7459;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,0:1:3.01:38,3,0	1/1:2,0:1:2.98:22,3,0	./.	0/0:4,0:1:0:0,0,0	1/1:0,1:1:3.01:48,3,0	1/1:0,3:3:9.03:143,9,0	./.	1/1:4,2:4:3.01:48,3,0	0/0:1,0:1:3.01:0,3,37	./.	./.	./.	./.	./.	./.	./.	1/1:0,7:8:18.06:287,18,0	1/1:0,8:7:18.06:287,18,0	1/1:0,1:1:3.01:48,3,0	1/1:0,1:1:3.01:48,3,0	./.	1/1:2,1:3:3.01:48,3,0	./.	./.	1/1:0,5:5:15.05:239,15,0	./.	./.	1/1:0,5:5:15.05:239,15,0
chr10	50461756	.	A	ACACACAC	788.50	PASS	AB=0.929;AC=8;AF=0.143;AN=56;BaseQRankSum=7.700;DP=586;FS=10.107;HRun=0;HaplotypeScore=202.0627;InbreedingCoeff=-0.1842;MQ=62.17;MQ0=5;MQRankSum=-4.907;QD=5.22;ReadPosRankSum=-1.233;VQSLOD=1.7360;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:15:7.69:0,8,66	0/0:9,0:9:1.97:0,2,42	0/0:28,0:21:63.20:0,63,997	0/0:35,0:32:93.31:0,93,1664	0/0:24,0:24:60:0,60,1412	0/1:8,4:12:60.03:82,0,60	0/0:16,0:13:22.87:0,23,106	0/1:25,0:20:73.24:73,0,108	0/1:16,1:17:82.69:83,0,90	0/0:28,0:28:63.08:0,63,1588	0/0:20,0:20:57.17:0,57,1358	0/1:23,0:22:63.30:157,0,63	0/1:20,0:21:60.67:191,0,61	0/0:31,0:31:85.20:0,85,2109	0/1:19,1:19:8.22:8,0,106	0/1:18,0:18:66.47:66,0,81	0/0:29,0:29:84.21:0,84,2008	0/0:24,0:24:63.12:0,63,1298	0/0:11,0:10:10.50:0,11,59	0/0:16,0:15:17.48:0,17,110	0/0:11,0:11:22.67:0,23,131	0/0:21,0:22:12.88:0,13,70	0/0:10,1:11:8.44:0,8,44	0/0:23,1:23:16.34:0,16,125	0/0:35,0:35:93.28:0,93,2152	0/0:32,0:32:78.19:0,78,1690	0/1:12,1:14:50.36:261,0,50	0/0:10,0:10:30.09:0,30,629
chr10	50461784	.	C	CACACACACAA	1266.48	PASS	AB=1.000;AC=21;AF=0.389;AN=54;BaseQRankSum=8.157;DP=537;FS=14.809;HRun=0;HaplotypeScore=191.3661;InbreedingCoeff=0.4569;MQ=44.59;MQ0=15;MQRankSum=-7.382;QD=6.92;ReadPosRankSum=-3.095;VQSLOD=0.9025;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:14:8.09:41,8,0	1/1:8,0:8:2.97:10,3,0	./.	0/0:19,0:11:13.10:0,13,154	0/0:30,0:29:38.67:0,39,893	1/1:11,0:11:9.97:205,10,0	1/1:8,0:5:0.89:2,1,0	0/1:26,0:19:45.71:46,0,101	0/1:14,0:14:27.25:142,0,27	0/0:32,0:32:90.14:0,90,2032	0/0:23,0:23:51.12:0,51,1229	1/1:25,0:24:6.99:187,7,0	0/1:23,0:23:6.09:174,0,6	0/0:32,0:32:72.55:0,73,1677	0/0:14,0:13:2.79:0,3,31	0/1:12,0:12:9.06:71,0,9	0/0:27,0:27:57.14:0,57,1502	0/0:21,0:21:45.99:0,46,1009	0/0:12,0:10:7.33:0,7,60	1/1:10,0:9:10.11:101,10,0	1/1:7,0:7:4.99:26,5,0	0/0:26,0:24:0.47:0,0,1	0/1:9,0:9:0:0,0,0	0/0:22,0:20:0.97:0,1,3	0/0:30,0:30:74.51:0,75,1881	0/0:41,0:40:99:0,106,2204	1/1:9,5:12:2.43:426,2,0	0/0:9,0:9:27.09:0,27,734
chr10	50461810	.	G	GAGAA	1436.44	PASS	AB=0.817;AC=21;AF=0.375;AN=56;BaseQRankSum=7.117;DP=589;FS=5.263;HRun=0;HaplotypeScore=137.1223;InbreedingCoeff=0.4194;MQ=56.57;MQ0=15;MQRankSum=-2.767;QD=5.68;ReadPosRankSum=-3.890;VQSLOD=1.2020;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:12,0:11:4.06:4,0,24	0/0:14,0:14:0.51:0,1,32	0/0:31,0:12:29.34:0,29,300	0/0:38,0:22:39.52:0,40,498	0/0:17,0:17:17.97:0,18,246	0/0:18,0:17:2.37:0,2,35	0/0:12,0:10:7.29:0,7,32	0/1:30,0:27:99:256,0,146	0/1:14,0:14:23.17:63,0,23	0/0:37,0:37:99:0,104,1391	0/0:20,0:19:51.08:0,51,724	0/1:9,13:23:12.96:65,0,13	0/1:3,18:23:10.78:25,0,11	0/0:30,0:30:69.09:0,69,1013	1/1:15,0:15:2.37:8,2,0	1/1:15,0:15:8.90:68,9,0	0/0:24,0:24:65.89:0,66,821	0/0:17,0:17:41.91:0,42,580	0/1:11,0:11:51.86:52,0,85	1/1:18,0:19:40.33:283,40,0	1/1:6,0:6:8.50:63,8,0	1/1:6,19:27:34.10:237,34,0	1/1:3,9:12:8.82:60,9,0	0/1:5,15:22:0:0,0,0	0/0:28,0:28:71.65:0,72,896	0/0:40,0:39:99:0,109,1268	1/1:22,0:21:34.41:433,34,0	0/0:10,0:10:26.33:0,26,371
chr10	50461812	.	G	GGAGAGAGAA	597.17	PASS	AB=0.950;AC=9;AF=0.167;AN=54;BaseQRankSum=4.187;DP=599;FS=3.006;HRun=0;HaplotypeScore=187.3926;InbreedingCoeff=0.3317;MQ=57.76;MQ0=15;MQRankSum=-5.157;QD=5.69;ReadPosRankSum=-1.946;VQSLOD=2.5620;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:11,0:11:20.21:42,0,20	0/1:14,0:14:10.85:127,0,11	0/0:31,0:12:23.63:0,24,470	0/0:39,0:23:58.90:0,59,896	0/0:18,0:18:21.06:0,21,499	0/1:18,0:18:36.71:95,0,37	0/1:12,0:10:0.04:87,0,0	0/0:34,0:31:77.47:0,77,1142	0/1:12,0:14:16.64:183,0,17	0/0:37,0:37:99:0,108,2449	0/0:20,0:19:51.16:0,51,1281	0/0:22,0:22:8.45:0,8,54	0/0:22,0:22:14.89:0,15,134	0/0:29,0:29:75.65:0,76,1828	1/1:4,1:18:3.01:37,3,0	1/1:5,0:16:9.03:165,9,0	0/0:22,0:22:66.19:0,66,1494	0/0:17,0:17:42.14:0,42,1060	0/0:12,0:12:31.94:0,32,448	0/0:21,0:20:12:0,12,319	0/0:9,0:9:10.42:0,10,105	0/0:27,0:27:36.29:0,36,205	0/0:12,0:12:10.02:0,10,53	./.	0/0:30,0:30:77.66:0,78,1751	0/0:42,0:41:99:0,116,2414	0/0:21,0:19:15.56:0,16,552	0/0:10,0:10:28.87:0,29,687
chr10	50463741	.	TCTC	T	16111.53	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=17.096;DP=646;FS=16.564;HRun=0;HaplotypeScore=129.8746;InbreedingCoeff=0.9938;MQ=68.85;MQ0=0;MQRankSum=-5.556;QD=38.73;ReadPosRankSum=3.556;VQSLOD=4.9205;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,40:42:99:1580,99,0	1/1:0,11:11:27.09:433,27,0	0/0:18,0:18:45.12:0,45,804	0/0:7,0:7:11.29:0,11,110	0/0:32,0:32:90.27:0,90,1875	1/1:2,17:19:48.16:771,48,0	1/1:6,24:30:63.21:1011,63,0	1/1:5,21:26:60.18:902,60,0	1/1:2,28:30:75.26:1203,75,0	0/0:28,0:28:78.27:0,78,1706	0/0:24,0:24:72.25:0,72,1553	1/1:1,22:23:60.20:962,60,0	1/1:2,23:25:63.21:1012,63,0	0/0:18,0:18:54.17:0,54,1150	1/1:0,23:23:63.21:1011,63,0	1/1:1,29:30:84.29:1349,84,0	0/0:29,0:29:75.26:0,75,1628	0/0:22,0:22:57.20:0,57,1256	1/1:4,15:19:45.14:695,45,0	1/1:2,25:27:72.16:1089,72,0	1/1:1,30:31:78.15:1194,78,0	1/1:0,18:18:51.17:809,51,0	1/1:1,11:12:24.01:355,24,0	1/1:6,24:30:60.20:964,60,0	0/0:18,0:18:51.18:0,51,1125	0/0:25,0:25:69.24:0,69,1522	1/1:1,19:20:47.92:770,48,0	0/0:9,0:9:21.07:0,21,463
chr10	50464020	.	T	TTATA	12592.08	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=-2.949;DP=658;FS=6.184;HRun=0;HaplotypeScore=111.3035;InbreedingCoeff=0.9978;MQ=83.18;MQ0=1;MQRankSum=-6.133;QD=34.98;ReadPosRankSum=1.139;VQSLOD=4.8836;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:39.66:0,40,112	1/1:2,0:16:30.78:141,31,0	0/0:26,0:26:54.15:0,54,861	0/0:15,0:15:33.07:0,33,521	0/0:30,0:30:81.27:0,81,1392	1/1:5,0:24:36.50:171,36,0	1/1:7,0:23:36.37:167,36,0	1/1:11,25:37:90.29:2049,90,0	1/1:5,0:25:55.96:256,56,0	0/0:30,0:30:87.29:0,87,1477	0/0:27,0:27:81.25:0,81,1360	1/1:5,14:20:27.09:671,27,0	1/1:1,9:12:21.07:538,21,0	0/0:18,0:18:48.15:0,48,799	1/1:1,0:25:55.96:256,56,0	1/1:2,0:18:36.37:167,36,0	0/0:35,0:35:78.19:0,78,1313	0/0:20,0:20:57.15:0,57,947	1/1:6,18:25:60.20:1319,60,0	1/1:2,24:27:57.20:1455,57,0	1/1:3,18:23:38.71:982,39,0	1/1:1,11:13:27.09:669,27,0	1/1:4,18:24:54.19:1331,54,0	1/1:6,15:21:30.10:738,30,0	0/0:29,0:29:84.24:0,84,1397	0/0:26,0:26:72.25:0,72,1271	1/1:5,21:26:66.23:1681,66,0	0/0:6,0:6:18.06:0,18,318
chr10	50464023	.	T	TAC	4308.28	PASS	AB=1.000;AC=26;AF=0.464;AN=56;BaseQRankSum=13.777;DP=636;FS=9.020;HRun=0;HaplotypeScore=111.1767;InbreedingCoeff=0.4140;MQ=82.69;MQ0=1;MQRankSum=-7.923;QD=11.31;ReadPosRankSum=6.085;VQSLOD=3.7700;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,35:35:84.29:1620,84,0	1/1:15,0:15:11.07:276,11,0	0/0:25,0:25:69.16:0,69,948	0/0:14,0:14:39.02:0,39,538	0/0:29,0:29:81.27:0,81,1233	0/1:22,0:22:3.94:291,0,4	0/1:21,0:21:48.82:287,0,49	0/1:34,0:34:21.75:116,0,22	1/1:22,0:22:18.07:477,18,0	0/0:30,0:30:90.30:0,90,1356	0/0:27,0:27:81.27:0,81,1229	0/1:19,0:19:29.59:33,0,30	0/1:14,0:14:10.44:15,0,10	0/0:19,0:19:57.15:0,57,801	1/1:26,0:26:17.08:473,17,0	1/1:18,0:18:17.04:313,17,0	0/0:31,0:31:87.23:0,87,1249	0/0:20,0:20:60.19:0,60,892	0/1:24,0:24:33.28:33,0,43	1/1:30,0:29:3.90:45,4,0	0/1:22,0:22:19.46:19,0,29	1/1:14,0:14:15.91:56,16,0	1/1:23,0:23:8.67:107,9,0	0/1:18,0:18:22.86:23,0,27	0/0:28,0:28:84.29:0,84,1280	0/0:26,0:26:78.25:0,78,1155	1/1:24,0:24:35.58:124,36,0	0/0:6,0:6:18.06:0,18,275
chr10	50465077	.	CTA	C	4826.72	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=11.515;DP=609;FS=2.249;HRun=0;HaplotypeScore=124.4415;InbreedingCoeff=0.9927;MQ=88.45;MQ0=0;MQRankSum=-8.889;QD=35.75;ReadPosRankSum=-0.241;VQSLOD=6.3103;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,114,2089	0/0:11,0:11:33.11:0,33,611	0/0:21,0:21:47.89:0,48,773	0/0:28,0:28:75.43:0,75,1280	0/0:16,0:16:48.16:0,48,890	0/0:26,0:26:72.25:0,72,1348	0/0:26,0:26:72.20:0,72,1317	1/1:4,30:34:87.28:1254,87,0	0/0:12,0:12:33.11:0,33,618	0/0:19,0:19:57.18:0,57,1011	0/0:12,0:12:36.12:0,36,674	0/0:18,0:18:48.16:0,48,898	0/0:22,0:22:63.22:0,63,1179	0/0:18,0:17:51.17:0,51,948	0/0:24,0:23:69.24:0,69,1284	0/0:17,0:17:42.14:0,42,787	0/0:32,0:32:93.32:0,93,1740	0/0:28,0:28:84.25:0,84,1525	1/1:3,22:25:66.22:969,66,0	1/1:0,18:18:42.14:617,42,0	1/1:3,26:29:56.86:838,57,0	0/0:19,0:19:54.17:0,54,979	0/0:17,0:17:45.61:0,46,801	0/0:24,0:24:63.18:0,63,1107	0/0:14,0:14:39.13:0,39,723	0/0:27,0:27:81.27:0,81,1488	1/1:1,28:29:78.26:1147,78,0	0/0:4,0:3:12.04:0,12,224
chr10	50465430	.	GT	G	9510.19	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=17.621;DP=541;FS=0.674;HRun=2;HaplotypeScore=94.5510;InbreedingCoeff=0.9840;MQ=85.13;MQ0=0;MQRankSum=-3.917;QD=32.35;ReadPosRankSum=0.562;VQSLOD=4.5445;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,19:19:48.05:582,48,0	1/1:1,5:6:15.05:193,15,0	0/0:18,0:18:49.02:0,49,656	0/0:19,0:19:50.74:0,51,632	0/0:35,0:35:99:0,102,1471	1/1:0,10:10:27.09:349,27,0	1/1:1,12:13:33.11:428,33,0	1/1:1,19:20:57.12:668,57,0	1/1:1,10:10:21:251,21,0	0/0:19,0:19:57.18:0,57,821	0/0:20,0:20:60.18:0,60,860	1/1:1,17:18:42.14:544,42,0	1/1:1,16:17:38.92:505,39,0	0/0:28,0:28:84.26:0,84,1203	1/1:0,4:4:9.03:117,9,0	1/1:0,10:10:30.03:368,30,0	0/0:41,0:41:99:0,123,1728	0/0:21,0:21:63.17:0,63,918	1/1:0,19:19:57.11:667,57,0	1/1:1,30:31:78.10:952,78,0	1/1:0,42:42:99:1556,120,0	1/1:0,14:14:33.11:427,33,0	1/1:0,12:11:30.01:351,30,0	1/1:1,27:28:63.16:816,63,0	0/0:15,0:15:42.13:0,42,609	0/0:26,0:26:75.24:0,75,1087	1/1:0,20:20:57.19:738,57,0	0/0:5,0:5:12.04:0,12,180
chr10	50466502	.	A	AG	1905.94	PASS	AB=0.975;AC=23;AF=0.411;AN=56;BaseQRankSum=10.101;DP=559;FS=23.127;HRun=0;HaplotypeScore=74.4071;InbreedingCoeff=0.2503;MQ=35.88;MQ0=91;MQRankSum=-5.734;QD=8.29;ReadPosRankSum=-1.768;VQSLOD=1.5272;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:14,2:9:74.61:114,0,75	1/1:3,0:3:3.01:42,3,0	0/0:39,0:8:23.02:0,23,268	0/0:50,0:5:4.26:0,4,45	0/0:27,0:17:44.98:0,45,579	1/1:10,0:6:15.05:205,15,0	0/1:12,0:5:33.04:35,0,33	0/1:21,0:14:32.34:256,0,32	0/1:5,0:3:35.18:35,0,36	0/0:24,0:24:58.11:0,58,859	0/0:16,0:11:29.93:0,30,388	0/1:24,0:18:64.05:64,0,169	0/1:27,1:17:11.96:141,0,12	0/0:27,0:21:54.04:0,54,715	1/1:12,0:8:15.05:201,15,0	1/1:12,0:10:15.05:205,15,0	0/0:33,0:17:42.14:0,42,583	0/0:23,0:18:35.17:0,35,432	0/1:12,0:11:10.88:329,0,11	1/1:12,0:6:7.59:122,8,0	1/1:11,0:6:3.01:41,3,0	0/0:15,0:10:19.39:0,19,169	0/1:29,0:24:45.97:46,0,291	0/1:10,1:4:32.78:58,0,33	0/0:22,0:19:33.98:0,34,497	0/0:24,0:17:46.26:0,46,635	1/1:12,0:7:15.05:199,15,0	0/0:29,0:27:66.22:0,66,918
chr10	50466526	.	GA	G	1059.68	PASS	AB=0.923;AC=17;AF=0.315;AN=54;BaseQRankSum=8.262;DP=472;FS=0.582;HRun=2;HaplotypeScore=98.5775;InbreedingCoeff=0.2730;MQ=38.65;MQ0=35;MQRankSum=-3.036;QD=7.06;ReadPosRankSum=-3.521;VQSLOD=-0.4618;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:11,2:10:5.22:5,0,59	0/0:8,0:7:4.04:0,4,40	0/0:35,0:6:18.03:0,18,213	0/0:45,1:5:3.01:0,3,39	0/0:16,0:15:33.05:0,33,427	0/0:12,0:11:1.16:0,1,25	1/1:9,0:8:2.50:9,2,0	0/0:16,1:13:22.86:0,23,263	0/1:5,0:5:2.70:3,0,35	0/0:16,0:16:45.10:0,45,562	0/0:12,0:12:30.04:0,30,380	0/1:22,2:21:53.02:176,0,53	0/1:21,1:17:3.53:312,0,4	0/0:19,0:19:48.13:0,48,608	0/1:8,0:8:12.12:12,0,25	0/0:12,0:12:16.19:0,16,231	0/0:28,0:26:66.67:0,67,913	0/0:19,0:16:41.06:0,41,479	0/1:3,2:5:32.90:134,0,33	1/1:9,0:8:0.31:18,0,0	./.	1/1:8,2:10:15.05:198,15,0	1/1:19,6:25:22.65:309,23,0	1/1:7,0:4:2.26:29,2,0	0/0:23,0:22:35.53:0,36,398	0/0:23,0:19:57:0,57,697	0/1:13,0:13:9.81:10,0,94	0/0:32,0:31:76.09:0,76,920
chr10	50466528	.	G	GA	547.45	PASS	AB=0.980;AC=12;AF=0.222;AN=54;BaseQRankSum=6.645;DP=470;FS=1.495;HRun=1;HaplotypeScore=105.4216;InbreedingCoeff=0.4671;MQ=38.75;MQ0=35;MQRankSum=0.132;QD=4.49;ReadPosRankSum=-0.388;VQSLOD=0.2223;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:12:5.47:0,5,62	0/0:10,0:9:6.47:0,6,44	0/0:34,0:6:15.03:0,15,168	0/0:45,0:5:3.01:0,3,39	0/0:19,0:18:33.09:0,33,406	0/1:13,0:12:7.15:7,0,18	0/1:10,0:9:0.04:0,0,0	0/0:17,0:12:24.14:0,24,239	0/0:5,0:5:2.80:0,3,38	0/0:18,0:18:44.61:0,45,510	0/0:11,0:11:27:0,27,343	0/1:21,2:20:91.38:123,0,91	1/1:22,1:18:12.30:272,12,0	0/0:17,0:17:38.74:0,39,457	0/0:9,0:9:2.96:0,3,36	0/0:12,0:12:20.77:0,21,228	0/0:27,0:26:63.20:0,63,807	0/0:18,0:16:39.45:0,39,462	0/0:3,0:3:6.64:0,7,48	1/1:9,0:8:2.55:10,3,0	./.	1/1:10,1:11:8.95:75,9,0	1/1:25,1:26:11.85:184,12,0	0/1:7,0:4:5.13:23,0,5	0/0:22,0:22:35.26:0,35,356	0/0:24,0:20:55.69:0,56,661	0/0:12,0:12:6.25:0,6,101	0/0:28,0:27:66.85:0,67,690
chr10	50466531	.	AG	A	383.10	PASS	AB=0.979;AC=8;AF=0.148;AN=54;BaseQRankSum=5.921;DP=454;FS=0.000;HRun=1;HaplotypeScore=104.4131;InbreedingCoeff=0.4017;MQ=38.82;MQ0=33;MQRankSum=0.662;QD=4.21;ReadPosRankSum=-1.450;VQSLOD=-0.4047;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:12:5.26:0,5,68	0/0:11,0:10:7.21:0,7,93	0/0:29,0:5:12:0,12,114	0/0:43,0:4:3.01:0,3,39	0/0:18,0:17:36.12:0,36,478	0/0:13,0:12:4.71:0,5,51	0/0:11,0:10:1.53:0,2,4	0/0:13,0:10:24.52:0,25,275	0/0:5,0:5:2.79:0,3,40	0/0:17,0:17:51.15:0,51,650	0/0:11,0:11:27.08:0,27,351	0/1:22,1:20:50.89:51,0,135	0/1:22,0:18:75.49:207,0,75	0/0:15,0:15:35.90:0,36,496	0/0:10,0:10:2.91:0,3,38	0/0:12,0:12:20.22:0,20,256	0/0:26,0:26:69.42:0,69,937	0/0:18,0:16:42.50:0,42,556	0/0:1,0:1:3.01:0,3,48	0/0:9,0:8:2.02:0,2,6	./.	1/1:11,2:13:11.72:90,12,0	1/1:22,4:26:10.74:147,11,0	1/1:6,1:4:3.34:21,3,0	0/0:20,0:20:29.96:0,30,383	0/0:24,0:20:60.19:0,60,811	0/0:12,0:12:16.89:0,17,169	0/0:28,0:27:78.13:0,78,934
chr10	50466556	.	GA	G	412.79	PASS	AB=0.819;AC=16;AF=0.320;AN=50;BaseQRankSum=6.760;DP=541;FS=0.751;HRun=1;HaplotypeScore=128.4723;InbreedingCoeff=0.3326;MQ=60.93;MQ0=28;MQRankSum=-5.914;QD=2.60;ReadPosRankSum=0.316;VQSLOD=-0.5353;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:12,2:13:5.97:0,6,76	1/1:7,3:10:12.43:148,12,0	0/0:58,0:21:16:0,16,405	0/0:75,0:20:26.54:0,27,321	0/0:26,0:26:51.16:0,51,664	1/1:12,9:20:3.61:51,4,0	1/1:8,6:14:5.77:78,6,0	./.	1/1:5,0:5:2.85:41,3,0	0/0:22,0:22:63.67:0,64,812	0/0:11,0:11:27.05:0,27,360	0/1:17,3:18:41.52:42,0,113	0/0:17,5:18:12.07:0,12,312	0/0:15,0:15:33.02:0,33,435	./.	0/1:11,3:14:23.21:23,0,188	0/0:24,0:24:63.65:0,64,871	0/0:19,0:17:39.46:0,39,556	0/1:2,1:3:29.96:30,0,78	1/1:14,8:21:0.30:70,0,0	./.	0/1:10,4:14:0:0,0,0	0/1:20,7:27:7.41:7,0,55	0/0:6,0:3:0:0,0,0	0/0:29,0:29:54.17:0,54,682	0/0:22,0:21:63.20:0,63,857	0/1:8,1:9:28.17:71,0,28	0/0:24,0:21:60.15:0,60,715
chr10	50466560	.	G	GGAC	1431.25	PASS	AB=0.954;AC=20;AF=0.385;AN=52;BaseQRankSum=7.795;DP=553;FS=8.411;HRun=0;HaplotypeScore=137.3561;InbreedingCoeff=0.2802;MQ=62.18;MQ0=30;MQRankSum=-8.868;QD=7.19;ReadPosRankSum=-0.972;VQSLOD=2.5266;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:12,0:11:16:16,0,45	1/1:9,2:11:22.87:343,23,0	0/0:63,0:25:45.25:0,45,639	0/0:86,0:26:47.59:0,48,568	0/0:28,0:28:54.16:0,54,919	1/1:21,0:20:31.88:263,32,0	1/1:13,1:14:8.92:122,9,0	./.	1/1:5,0:5:2.08:9,2,0	0/0:21,0:21:57.67:0,58,1037	0/0:10,0:10:27.06:0,27,451	0/1:20,0:18:99:232,0,108	0/1:18,1:15:24.95:25,0,257	0/0:15,0:15:33.11:0,33,560	0/0:11,0:11:0:0,0,0	0/1:13,0:14:99:118,0,209	0/0:23,0:24:61.15:0,61,1092	0/0:17,0:15:39.95:0,40,650	0/1:5,0:3:52.04:52,0,64	1/1:22,0:21:3:121,3,0	./.	0/1:13,1:14:0:0,0,0	0/1:26,0:26:47.82:59,0,48	1/1:6,1:4:2.74:15,3,0	0/0:29,0:29:54.15:0,54,887	0/0:23,0:22:63.18:0,63,1064	0/1:7,2:9:37.47:222,0,37	0/0:22,0:19:53.58:0,54,666
chr10	50466562	.	G	GGAC	1040.30	PASS	AB=0.932;AC=18;AF=0.346;AN=52;BaseQRankSum=8.152;DP=556;FS=7.114;HRun=0;HaplotypeScore=137.8198;InbreedingCoeff=0.2718;MQ=63.55;MQ0=30;MQRankSum=-8.285;QD=5.36;ReadPosRankSum=-0.009;VQSLOD=2.3650;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:12,0:11:4.74:5,0,46	1/1:8,3:11:11.34:292,11,0	0/0:64,0:26:32.57:0,33,697	0/0:90,0:29:43.12:0,43,638	0/0:28,0:28:57.15:0,57,925	1/1:18,4:20:25.81:165,26,0	1/1:12,1:13:8.24:95,8,0	./.	0/0:5,0:5:2.48:0,2,14	0/0:20,0:20:57.66:0,58,997	0/0:11,0:11:27.08:0,27,463	0/1:18,2:18:62.70:151,0,63	0/1:17,2:15:8.46:8,0,189	0/0:15,0:15:33.11:0,33,552	0/0:11,0:11:5.09:0,5,18	0/1:13,1:14:94.65:95,0,191	0/0:24,0:24:62.73:0,63,1050	0/0:17,0:15:39.58:0,40,663	0/1:6,0:4:45.14:45,0,51	1/1:21,1:21:3.84:96,4,0	./.	0/1:14,0:14:0:0,0,0	0/1:22,3:25:29.69:42,0,30	1/1:7,0:4:1.90:6,2,0	0/0:27,0:27:51.14:0,51,844	0/0:23,0:22:66.19:0,66,1077	0/1:7,2:9:38:200,0,38	0/0:22,0:19:44.55:0,45,547
chr10	50466567	.	AG	A	1840.75	PASS	AB=0.769;AC=27;AF=0.500;AN=54;BaseQRankSum=8.029;DP=536;FS=26.399;HRun=2;HaplotypeScore=108.5422;InbreedingCoeff=0.5751;MQ=67.62;MQ0=29;MQRankSum=-7.934;QD=9.02;ReadPosRankSum=-2.471;VQSLOD=-0.5047;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:11,2:11:4.13:33,0,4	1/1:4,7:11:29.68:334,30,0	0/0:65,0:27:45.69:0,46,669	0/0:94,0:32:51.72:0,52,653	0/0:25,0:25:54.18:0,54,718	1/1:8,10:17:33.01:415,33,0	1/1:6,7:13:9.03:115,9,0	1/1:2,5:4:12:123,12,0	1/1:4,1:5:2.85:38,3,0	0/0:19,0:19:54.56:0,55,695	0/0:9,0:9:27.09:0,27,366	1/1:13,5:16:17.07:178,17,0	1/1:11,6:13:18.98:219,19,0	0/0:15,0:15:12.08:0,12,401	1/1:7,4:11:6.02:76,6,0	0/1:9,3:12:48.49:96,0,48	0/0:21,0:21:60.19:0,60,814	0/0:16,0:15:14.87:0,15,494	0/1:4,2:4:35.39:68,0,35	1/1:12,9:20:5.11:109,5,0	./.	0/1:8,6:14:0:0,0,0	1/1:14,9:23:4.73:75,5,0	1/1:4,3:4:2.91:38,3,0	0/0:23,4:27:29.69:0,30,599	0/0:21,0:20:50.08:0,50,590	0/1:5,3:8:29.07:118,0,29	0/0:17,0:15:22.08:0,22,382
chr10	50466568	.	G	GA	1961.73	PASS	AB=0.852;AC=26;AF=0.500;AN=52;BaseQRankSum=8.483;DP=521;FS=24.983;HRun=1;HaplotypeScore=102.8694;InbreedingCoeff=0.5489;MQ=68.49;MQ0=28;MQRankSum=-7.711;QD=11.02;ReadPosRankSum=-3.219;VQSLOD=-0.1070;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:12,0:10:3.87:33,0,4	1/1:8,3:11:30.09:373,30,0	0/0:65,0:27:40.32:0,40,665	0/0:94,0:32:53.19:0,53,645	0/0:25,0:25:54.18:0,54,719	1/1:13,4:16:33.01:434,33,0	1/1:9,1:10:9.03:115,9,0	1/1:8,0:4:12:123,12,0	1/1:2,1:4:2.96:24,3,0	0/0:20,0:20:57.65:0,58,734	0/0:9,0:9:27.09:0,27,360	1/1:8,7:14:15.04:195,15,0	1/1:8,5:11:18.93:214,19,0	0/0:16,0:16:11.66:0,12,366	1/1:11,0:11:6.02:76,6,0	0/1:10,2:12:41.52:107,0,42	0/0:21,0:21:60.19:0,60,798	0/0:14,1:15:14.66:0,15,479	0/1:4,2:4:32.40:68,0,32	1/1:17,1:17:12.10:125,12,0	./.	./.	1/1:17,5:23:8.38:72,8,0	1/1:7,0:4:2.82:38,3,0	0/0:24,0:24:2.58:0,3,529	0/0:21,0:20:46.86:0,47,549	0/1:6,2:8:22.36:154,0,22	0/0:16,1:15:1.25:0,1,204
chr10	50467001	.	C	CA	13187.76	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=17.673;DP=615;FS=5.202;HRun=3;HaplotypeScore=82.5757;InbreedingCoeff=0.9930;MQ=80.21;MQ0=0;MQRankSum=-0.044;QD=36.73;ReadPosRankSum=-0.373;VQSLOD=4.9737;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,25:25:66.22:905,66,0	1/1:0,6:6:18.06:246,18,0	0/0:22,0:21:42.12:0,42,501	0/0:10,0:10:27.02:0,27,291	0/0:33,0:33:93.27:0,93,1104	1/1:1,30:31:81.27:1112,81,0	1/1:0,6:6:15.05:204,15,0	1/1:1,33:35:99:1368,102,0	1/1:1,18:19:48.16:658,48,0	0/0:27,0:27:78.24:0,78,936	0/0:31,0:31:81.25:0,81,971	1/1:0,25:25:69.23:948,69,0	1/1:0,20:20:57.19:780,57,0	0/0:17,0:17:48.15:0,48,576	1/1:4,17:21:57.18:765,57,0	1/1:2,14:16:39.13:527,39,0	0/0:24,0:24:66.20:0,66,792	0/0:26,0:26:72.22:0,72,864	1/1:0,21:21:63.21:854,63,0	1/1:0,28:28:78.15:1025,78,0	1/1:3,8:11:15.05:206,15,0	1/1:1,23:24:66.18:885,66,0	1/1:0,36:36:99:1400,102,0	1/1:0,7:7:18.06:248,18,0	0/0:22,0:22:66.20:0,66,791	0/0:26,0:26:69.21:0,69,828	1/1:5,23:27:78.25:1056,78,0	0/0:18,0:18:48.15:0,48,576
chr10	50467103	.	G	GT	483.40	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=1.971;DP=632;FS=9.456;HRun=8;HaplotypeScore=116.8513;InbreedingCoeff=0.8382;MQ=80.77;MQ0=0;MQRankSum=-3.686;QD=16.67;ReadPosRankSum=-2.903;VQSLOD=2.0045;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,20:29:40.45:578,40,0	0/0:13,0:13:34.95:0,35,193	0/0:20,0:19:48.01:0,48,437	0/0:17,0:16:11.69:0,12,250	0/0:38,0:38:99:0,99,902	0/0:20,1:21:26.83:0,27,248	0/0:13,0:13:34.35:0,34,174	0/0:37,0:37:71.92:0,72,368	0/0:18,0:18:44.40:0,44,238	0/0:30,0:30:71.98:0,72,650	0/0:23,0:23:66.02:0,66,599	0/0:17,0:17:11.31:0,11,26	0/0:22,0:22:17.95:0,18,54	0/0:29,0:29:72.03:0,72,659	0/0:22,0:22:30.29:0,30,246	0/0:20,0:20:29.14:0,29,242	0/0:17,0:17:51.03:0,51,467	0/0:15,0:15:42.02:0,42,384	0/0:24,0:24:26.79:0,27,224	0/0:39,0:39:61.49:0,61,446	0/0:20,0:20:52.07:0,52,279	0/0:24,0:24:15.66:0,16,38	0/0:15,0:15:10.56:0,11,25	0/0:17,0:17:12.42:0,12,29	0/0:26,0:26:75.04:0,75,687	0/0:33,0:33:84.02:0,84,765	0/0:25,0:25:14.15:0,14,265	0/0:8,0:8:18:0,18,165
chr10	50467110	.	TTG	T	459.42	PASS	AB=0.979;AC=14;AF=0.250;AN=56;BaseQRankSum=8.185;DP=629;FS=5.427;HRun=0;HaplotypeScore=132.7472;InbreedingCoeff=0.6126;MQ=80.18;MQ0=0;MQRankSum=-5.166;QD=2.24;ReadPosRankSum=-3.862;VQSLOD=0.3289;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:29:1.56:2,0,105	0/0:13,0:13:14.03:0,14,260	0/0:21,0:20:36.21:0,36,940	0/0:15,0:14:38.86:0,39,645	0/0:35,0:35:99:0,105,1949	0/0:21,0:21:56.75:0,57,443	0/1:15,1:16:10.77:11,0,222	0/0:31,0:31:43.13:0,43,483	0/0:18,1:19:1.57:0,2,299	0/0:31,0:31:90.25:0,90,1590	0/0:26,0:26:78.18:0,78,1355	1/1:16,0:16:28.08:106,28,0	1/1:20,0:20:14.03:85,14,0	0/0:24,0:24:72.25:0,72,1386	0/0:22,0:22:32.75:0,33,384	0/0:20,1:21:25.89:0,26,354	0/0:17,0:17:51.17:0,51,984	0/0:16,0:16:45.13:0,45,833	0/1:26,0:26:64:64,0,312	0/1:37,1:38:16.24:16,0,620	0/0:20,0:20:29.35:0,29,369	1/1:25,1:26:38.46:179,38,0	1/1:17,0:17:17.06:71,17,0	1/1:17,0:17:28.42:105,28,0	0/0:27,0:26:81.24:0,81,1493	0/0:33,0:33:99:0,99,1769	0/0:22,2:24:12.92:0,13,420	0/0:8,0:8:24.05:0,24,398
chr10	50467111	.	TG	T	3868.54	PASS	AB=0.990;AC=17;AF=0.304;AN=56;BaseQRankSum=4.619;DP=621;FS=6.799;HRun=1;HaplotypeScore=108.0407;InbreedingCoeff=0.5484;MQ=80.47;MQ0=0;MQRankSum=-3.700;QD=15.85;ReadPosRankSum=-4.354;VQSLOD=2.0317;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:26:40.84:210,41,0	0/0:13,0:13:8.65:0,9,85	0/0:21,0:20:26.71:0,27,654	0/0:15,0:14:29.24:0,29,462	0/0:34,0:34:99:0,102,1452	0/0:22,0:22:46.71:0,47,167	0/1:16,0:16:48.75:58,0,49	0/0:30,0:30:4.44:0,4,116	0/1:18,1:19:41.19:41,0,85	0/0:31,0:31:90.20:0,90,1220	0/0:26,0:26:78.18:0,78,1053	1/1:1,15:16:48:582,48,0	1/1:4,16:20:50.10:740,50,0	0/0:24,0:24:72.24:0,72,1048	0/0:22,0:22:21.25:0,21,118	0/0:21,0:21:16.47:0,16,109	0/0:17,0:17:51.17:0,51,746	0/0:15,0:15:45.13:0,45,637	0/1:26,0:26:74.06:77,0,74	0/1:38,0:38:31.29:31,0,196	0/0:20,0:20:23.33:0,23,129	1/1:5,21:26:78.04:963,78,0	1/1:3,14:17:50.99:610,51,0	1/1:1,15:16:42.08:539,42,0	0/0:28,0:27:84.23:0,84,1167	0/0:32,0:32:96.29:0,96,1323	0/1:24,0:24:17.48:17,0,124	0/0:6,0:6:18.06:0,18,263
chr10	50467165	.	T	TC	13577.87	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-3.508;DP=629;FS=5.664;HRun=3;HaplotypeScore=79.3618;InbreedingCoeff=0.9987;MQ=87.14;MQ0=0;MQRankSum=-5.752;QD=36.70;ReadPosRankSum=1.719;VQSLOD=5.4017;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,21:23:57.10:751,57,0	1/1:0,10:10:30.10:420,30,0	0/0:35,0:35:95.50:0,95,1108	0/0:25,0:25:68.68:0,69,778	0/0:29,0:29:81.24:0,81,960	1/1:2,22:24:60.20:840,60,0	1/1:2,15:17:42.14:588,42,0	1/1:0,32:32:96.31:1326,96,0	1/1:1,23:24:66.22:924,66,0	0/0:31,0:31:90.27:0,90,1072	0/0:30,0:30:90.28:0,90,1079	1/1:3,20:23:60.19:822,60,0	1/1:0,15:15:45.15:629,45,0	0/0:21,0:21:63.19:0,63,756	1/1:0,29:29:81.27:1134,81,0	1/1:4,16:20:48.16:671,48,0	0/0:18,0:18:45.12:0,45,527	0/0:14,0:14:42.13:0,42,504	1/1:5,14:19:45.15:630,45,0	1/1:1,28:29:81.23:1110,81,0	1/1:0,23:23:63.21:882,63,0	1/1:3,19:22:60.16:816,60,0	1/1:2,14:16:39.12:523,39,0	1/1:2,21:23:51.08:670,51,0	0/0:20,0:19:60.18:0,60,720	0/0:28,0:28:78.24:0,78,936	1/1:1,20:21:60.20:839,60,0	0/0:8,0:8:18.03:0,18,203
chr10	50469838	.	TA	T	10313.02	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=8.229;DP=638;FS=4.334;HRun=7;HaplotypeScore=73.4023;InbreedingCoeff=0.9990;MQ=73.82;MQ0=1;MQRankSum=-1.349;QD=26.72;ReadPosRankSum=2.042;VQSLOD=5.7441;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,14:15:39.08:398,39,0	1/1:0,8:8:24.05:245,24,0	0/0:24,0:16:23.02:0,23,245	0/0:27,0:23:34.71:0,35,386	0/0:20,0:20:54.15:0,54,663	1/1:1,28:29:78.18:796,78,0	1/1:1,19:20:51.11:520,51,0	1/1:6,29:35:87.19:887,87,0	1/1:0,27:27:72.16:735,72,0	0/0:28,0:28:75.22:0,75,929	0/0:18,0:18:51.16:0,51,641	1/1:1,19:20:54.12:551,54,0	1/1:1,23:24:66.15:673,66,0	0/0:28,0:28:75.22:0,75,917	1/1:1,20:21:60.14:612,60,0	1/1:2,26:28:75.17:765,75,0	0/0:23,0:23:69.22:0,69,868	0/0:24,0:24:54.13:0,54,661	1/1:7,23:30:69.14:704,69,0	1/1:2,25:27:69.15:704,69,0	1/1:0,8:8:24.05:245,24,0	1/1:0,20:20:57.13:581,57,0	1/1:0,22:22:57.13:581,57,0	1/1:3,23:26:66.15:673,66,0	0/0:18,0:18:51.16:0,51,641	0/0:26,1:27:41.60:0,42,814	1/1:4,22:26:63.14:643,63,0	0/0:12,0:12:36.08:0,36,422
chr10	50470119	.	GGTGTGTGTGTGT	G	646.70	PASS	AB=0.886;AC=16;AF=0.348;AN=46;BaseQRankSum=4.895;DP=512;FS=20.751;HRun=0;HaplotypeScore=156.3922;InbreedingCoeff=0.5362;MQ=74.67;MQ0=10;MQRankSum=-3.896;QD=3.51;ReadPosRankSum=-0.627;VQSLOD=1.4802;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:27:2.99:23,3,0	./.	./.	./.	0/0:8,0:8:6.01:0,6,199	./.	1/1:15,5:20:0.47:1,0,0	0/1:20,0:20:5.13:14,0,5	0/1:12,5:17:99:134,0,101	0/0:13,0:16:18.53:0,19,642	0/0:11,0:12:9.03:0,9,397	0/0:16,0:16:18.06:0,18,887	0/0:14,0:17:18.05:0,18,552	0/0:19,0:19:12.51:0,13,531	1/1:24,8:32:6.02:205,6,0	1/1:9,6:16:14.08:297,14,0	0/0:20,0:19:22.86:0,23,900	0/0:18,0:18:30.10:0,30,1310	./.	1/1:15,0:15:0.47:1,0,0	1/1:25,0:22:4.80:28,5,0	0/0:10,0:10:6.02:0,6,279	0/0:10,0:10:15.04:0,15,598	0/0:31,0:36:51.65:0,52,2415	0/0:10,0:10:3.01:0,3,150	0/0:22,0:23:21.67:0,22,488	1/1:10,0:11:3.01:84,3,0	0/0:8,0:11:24.08:0,24,991
chr10	50471762	.	T	TCA	460.72	PASS	AB=1.000;AC=17;AF=0.405;AN=42;BaseQRankSum=-1.330;DP=462;FS=1.120;HRun=0;HaplotypeScore=71.8027;InbreedingCoeff=0.5845;MQ=74.59;MQ0=10;MQRankSum=0.743;QD=3.27;ReadPosRankSum=-2.486;VQSLOD=1.3235;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:2.22:0,2,7	./.	./.	./.	0/0:13,0:13:8.99:0,9,80	0/0:14,0:14:3.01:0,3,32	0/0:18,0:21:8.35:0,8,41	./.	./.	1/1:18,0:18:9.91:74,10,0	1/1:16,0:15:9:93,9,0	1/1:16,0:16:3:25,3,0	1/1:12,6:20:9.50:132,10,0	./.	0/0:11,0:13:5.68:0,6,28	0/0:11,0:14:11.42:0,11,59	0/0:23,0:24:23.52:0,24,234	0/0:17,0:20:14.33:0,14,127	./.	0/0:5,0:6:2.84:0,3,14	0/0:20,0:20:5.59:0,6,26	1/1:13,0:13:6.01:67,6,0	1/1:14,0:14:3.01:42,3,0	1/1:18,4:22:9.03:131,9,0	0/0:15,0:15:2.84:0,3,14	0/1:17,0:17:0:0,0,0	0/0:6,0:8:5.68:0,6,28	1/1:2,0:2:3.01:41,3,0
chr10	50472505	.	TC	T	3484.48	PASS	AB=0.950;AC=26;AF=0.464;AN=56;BaseQRankSum=-3.708;DP=443;FS=3.512;HRun=10;HaplotypeScore=59.6085;InbreedingCoeff=0.7402;MQ=71.05;MQ0=1;MQRankSum=2.674;QD=13.15;ReadPosRankSum=3.347;VQSLOD=3.6074;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,22:30:62.01:526,62,0	1/1:2,7:9:11.97:104,12,0	0/0:27,0:19:4.47:0,4,262	0/1:23,0:18:14:14,0,117	0/0:14,0:15:14.31:0,14,177	1/1:1,12:14:38.03:318,38,0	1/1:4,20:24:41.99:364,42,0	1/1:16,6:22:17.92:152,18,0	1/1:3,8:11:11.93:104,12,0	0/1:8,1:9:15.97:16,0,50	0/0:9,0:9:18.03:0,18,188	0/0:11,0:11:20.10:0,20,128	0/0:10,0:10:4.41:0,4,36	0/0:18,0:18:30.07:0,30,263	1/1:5,19:24:50.65:427,51,0	1/1:5,12:17:32.97:285,33,0	0/0:21,0:21:43.32:0,43,436	0/0:11,0:11:24.90:0,25,235	1/1:7,12:19:35.71:297,36,0	1/1:9,13:22:26.71:233,27,0	1/1:8,14:22:8.81:305,9,0	0/0:2,0:2:0:0,0,0	0/0:9,0:9:5.40:0,5,39	0/0:2,0:4:5.84:0,6,40	0/0:21,0:21:41.49:0,41,387	0/0:11,0:11:11.96:0,12,102	1/1:4,15:19:38.15:337,38,0	0/0:9,0:9:17.07:0,17,170
chr10	50473967	.	TA	T	9229.78	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=16.962;DP=798;FS=8.855;HRun=7;HaplotypeScore=100.8728;InbreedingCoeff=0.9999;MQ=75.21;MQ0=0;MQRankSum=-0.241;QD=26.91;ReadPosRankSum=-0.248;VQSLOD=4.3840;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,53:59:99:1592,156,0	0/0:11,0:11:30.10:0,30,376	0/0:27,0:26:69.05:0,69,813	0/0:29,0:29:68.70:0,69,749	0/0:34,0:34:99:0,102,1270	0/0:24,0:24:66.21:0,66,830	0/0:24,0:24:69.20:0,69,854	1/1:1,30:31:90.19:911,90,0	0/0:30,0:30:84.27:0,84,1055	0/0:31,0:31:75.23:0,75,934	0/0:25,0:25:72.23:0,72,904	1/1:4,24:29:72.16:735,72,0	1/1:2,25:27:69.16:704,69,0	0/0:23,0:23:69.22:0,69,868	0/0:36,0:36:99:0,102,1270	0/0:33,0:33:96.30:0,96,1197	0/0:28,0:28:84.27:0,84,1057	0/0:25,0:25:69.15:0,69,848	1/1:1,19:20:57.12:575,57,0	1/1:1,33:34:96.22:980,96,0	1/1:1,35:36:93.21:949,93,0	1/1:1,19:20:51.11:520,51,0	1/1:1,32:33:80.85:826,81,0	1/1:2,24:26:72.16:734,72,0	0/0:30,0:30:90.29:0,90,1131	0/0:28,0:28:69.20:0,69,846	1/1:2,26:28:69.16:704,69,0	0/0:17,0:17:51.16:0,51,642
chr10	50476671	.	A	AT	10754.90	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=13.558;DP=621;FS=0.619;HRun=1;HaplotypeScore=69.8711;InbreedingCoeff=0.9914;MQ=68.68;MQ0=0;MQRankSum=0.518;QD=40.89;ReadPosRankSum=-1.497;VQSLOD=4.7827;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:63.19:0,63,804	1/1:1,10:11:27.09:405,27,0	0/0:10,0:10:27.09:0,27,346	0/0:8,0:8:9.06:0,9,200	0/0:26,0:26:78.25:0,78,1012	1/1:0,22:22:60.20:899,60,0	1/1:0,20:20:51.17:764,51,0	1/1:3,30:33:93.29:1349,93,0	1/1:1,15:16:42.14:629,42,0	0/0:24,0:24:63.20:0,63,818	0/0:35,0:35:99:0,102,1282	0/0:22,0:22:66.20:0,66,842	0/0:22,0:22:66.20:0,66,843	0/0:24,0:24:72.22:0,72,920	1/1:0,28:28:75.25:1124,75,0	1/1:0,22:22:66.22:989,66,0	0/0:25,0:25:72.23:0,72,935	0/0:14,0:14:42.14:0,42,544	1/1:2,18:20:60.15:826,60,0	1/1:1,44:45:99:1790,123,0	1/1:1,18:19:54.18:809,54,0	0/0:10,0:10:30.10:0,30,387	0/0:26,0:26:78.22:0,78,982	0/0:33,0:33:99:0,99,1285	0/0:26,0:26:78.25:0,78,1012	0/0:14,0:14:39.12:0,39,494	1/1:0,27:27:78.26:1169,78,0	0/0:15,0:15:45.15:0,45,584
chr10	50477052	.	GGT	G	1161.29	PASS	AB=0.879;AC=28;AF=0.538;AN=52;BaseQRankSum=9.502;DP=702;FS=9.869;HRun=0;HaplotypeScore=102.0538;InbreedingCoeff=-0.4337;MQ=62.70;MQ0=21;MQRankSum=-1.721;QD=1.96;ReadPosRankSum=1.024;VQSLOD=1.2630;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:36,5:41:65.32:65,0,280	0/0:8,0:9:12.03:0,12,161	./.	./.	0/1:20,8:28:90.87:91,0,195	0/1:20,0:20:37.99:38,0,247	0/1:32,3:34:2.73:3,0,367	1/1:30,0:28:2.04:6,2,0	0/1:28,1:30:28.64:29,0,529	0/1:27,0:29:21.52:22,0,152	0/0:18,0:18:24.06:0,24,322	0/1:23,3:27:45.11:45,0,301	0/0:20,2:22:0.12:0,0,325	0/1:19,2:25:97.61:98,0,225	0/1:22,4:25:23.54:24,0,472	0/1:16,3:20:44.62:45,0,160	0/1:21,4:25:62.40:62,0,363	0/1:19,2:22:44.14:44,0,293	1/1:14,0:15:11.36:56,11,0	1/1:12,0:21:23.20:112,23,0	1/1:16,0:19:5.68:28,6,0	0/1:24,1:25:5.75:6,0,310	0/1:22,0:21:24.43:24,0,157	0/1:27,9:35:56.65:57,0,376	0/1:22,4:26:65.41:65,0,275	0/1:17,5:21:99:133,0,141	1/1:11,0:27:39.64:195,40,0	0/1:11,2:11:43.80:67,0,44
chr10	50478094	.	CCTGGT	C	2211.56	PASS	AB=0.778;AC=9;AF=0.161;AN=56;BaseQRankSum=11.250;DP=656;FS=10.284;HRun=0;HaplotypeScore=162.5766;InbreedingCoeff=0.8665;MQ=99.11;MQ0=0;MQRankSum=-11.554;QD=22.80;ReadPosRankSum=1.081;VQSLOD=3.0572;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:57.20:0,57,1795	0/0:10,0:10:30.10:0,30,1000	0/0:35,0:35:99:0,105,3137	0/0:37,0:37:99:0,108,3333	0/0:36,0:36:99:0,108,3521	0/0:32,0:32:96.33:0,96,3073	0/0:22,0:22:66.23:0,66,2001	1/1:14,8:22:23.67:384,24,0	0/0:25,0:25:72.25:0,72,2398	0/0:31,0:31:93.32:0,93,2941	0/0:23,0:23:69.24:0,69,2264	0/0:21,0:21:63.22:0,63,1982	0/0:27,0:27:81.28:0,81,2692	0/0:23,0:23:69.24:0,69,2233	0/0:35,0:35:99:0,105,3325	0/0:22,0:22:66.20:0,66,2004	0/0:25,0:25:75.26:0,75,2395	0/0:13,0:13:36.09:0,36,1107	1/1:11,8:19:29.95:403,30,0	1/1:6,21:27:55.54:791,56,0	0/1:5,2:7:38.91:70,0,39	0/0:20,0:20:60.21:0,60,1948	0/0:20,0:20:60.20:0,60,1868	0/0:14,0:13:42.14:0,42,1371	0/0:21,0:21:63.21:0,63,1962	0/0:39,0:39:99:0,117,3810	1/1:6,16:22:53.98:728,54,0	0/0:9,0:9:27.09:0,27,900
chr10	50478100	.	AGGGTCACATCC	A	4546.56	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=12.709;DP=615;FS=17.059;HRun=0;HaplotypeScore=224.7975;InbreedingCoeff=0.9911;MQ=102.21;MQ0=0;MQRankSum=-12.243;QD=74.53;ReadPosRankSum=1.696;VQSLOD=3.3954;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:57.20:0,57,3312	0/0:10,0:10:30.10:0,30,1369	0/0:34,0:34:99:0,102,4590	0/0:39,0:39:99:0,117,4837	0/0:36,0:36:99:0,108,6214	0/0:30,0:30:90.27:0,90,4057	0/0:20,0:20:60.19:0,60,2691	1/1:2,8:10:30.09:756,30,0	0/0:25,0:25:72.23:0,72,3402	0/0:30,0:30:90.31:0,90,5242	0/0:25,0:25:75.24:0,75,4217	0/0:24,0:24:72.23:0,72,4095	0/0:27,0:27:81.25:0,81,4300	0/0:24,0:24:72.25:0,72,4209	0/0:31,0:31:93.31:0,93,4461	0/0:20,0:20:60.21:0,60,2663	0/0:25,0:25:75.24:0,75,4045	0/0:13,0:13:36.12:0,36,1930	1/1:0,8:8:24.08:700,24,0	1/1:2,21:23:66.07:1649,66,0	1/1:2,2:4:11.61:113,12,0	0/0:20,0:20:60.21:0,60,3456	0/0:20,0:20:60.18:0,60,3049	0/0:15,0:14:45.11:0,45,2272	0/0:21,0:21:63.22:0,63,3227	0/0:37,0:37:99:0,111,6355	1/1:1,15:16:48.16:1329,48,0	0/0:9,0:9:27.09:0,27,1587
chr10	50479491	.	A	ACCTGGAGGTGCATACAGATGGATCT	37763.03	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=6.654;DP=568;FS=0.359;HRun=0;HaplotypeScore=335.7018;InbreedingCoeff=0.9932;MQ=77.47;MQ0=0;MQRankSum=-16.962;QD=146.94;ReadPosRankSum=1.055;VQSLOD=3.9579;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:38,2:44:63.21:4935,63,0	0/0:11,0:11:27.09:0,27,1686	0/0:18,0:18:43.39:0,43,1724	0/0:15,0:15:39.10:0,39,1455	0/0:19,0:19:51.18:0,51,2752	0/0:20,0:20:57.18:0,57,3085	0/0:23,0:23:63.22:0,63,3514	1/1:38,0:38:99:6890,102,0	0/0:12,0:12:33.11:0,33,1845	0/0:13,0:13:30.10:0,30,1590	0/0:12,0:12:36.12:0,36,2034	1/1:17,5:25:56.87:4853,57,0	1/1:8,5:15:39.13:4072,39,0	0/0:17,0:17:48.16:0,48,2850	0/0:13,0:13:36.11:0,36,1761	0/0:14,0:14:30.09:0,30,1831	0/0:32,0:32:93.28:0,93,5174	0/0:39,0:39:99:0,117,7171	1/1:18,0:18:45.13:2868,45,0	1/1:12,3:16:21.07:1813,21,0	1/1:18,0:18:18.06:1377,18,0	1/1:12,0:12:17.69:1256,18,0	1/1:15,1:18:14.09:1078,14,0	1/1:20,1:24:24.08:2424,24,0	0/0:19,0:19:54.19:0,54,3120	0/0:24,0:24:69.24:0,69,3658	1/1:24,2:29:66.70:6198,67,0	0/0:10,0:10:24.08:0,24,1458
chr10	50482426	.	AAC	A	9133.31	PASS	AB=0.889;AC=35;AF=0.625;AN=56;BaseQRankSum=12.926;DP=563;FS=0.729;HRun=0;HaplotypeScore=104.0492;InbreedingCoeff=0.8965;MQ=71.39;MQ0=0;MQRankSum=3.013;QD=28.02;ReadPosRankSum=3.602;VQSLOD=5.9501;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,21:27:47.48:604,47,0	1/1:3,8:11:21.07:265,21,0	0/0:27,0:24:3.69:0,4,680	0/0:33,0:29:61.07:0,61,766	0/0:24,0:24:51.13:0,51,794	1/1:2,23:25:63.20:794,63,0	1/1:1,12:13:36.12:454,36,0	1/1:14,23:37:69.20:844,69,0	1/1:4,9:13:24.08:303,24,0	0/0:18,0:18:42.14:0,42,698	0/0:18,0:18:48.16:0,48,797	1/1:2,17:19:51.16:644,51,0	1/1:2,15:17:30.10:379,30,0	0/0:16,0:16:33.11:0,33,549	1/1:2,14:16:36.12:454,36,0	1/1:2,11:13:36.10:441,36,0	0/0:30,0:30:78.27:0,78,1296	0/0:31,0:31:78.22:0,78,1252	1/1:5,15:19:15.98:556,16,0	1/1:0,14:14:42.13:530,42,0	1/1:4,18:22:54.17:681,54,0	1/1:1,9:10:27.09:341,27,0	1/1:1,6:7:18.06:227,18,0	1/1:1,27:28:81.26:1022,81,0	0/0:22,0:22:51.17:0,51,848	0/1:14,2:16:25.59:26,0,438	1/1:3,15:18:45.14:568,45,0	0/0:17,0:17:45.09:0,45,691
chr10	50482542	.	C	CT	4532.59	PASS	AB=0.602;AC=20;AF=0.357;AN=56;BaseQRankSum=-1.896;DP=615;FS=2.025;HRun=10;HaplotypeScore=87.8491;InbreedingCoeff=0.8444;MQ=78.98;MQ0=1;MQRankSum=-0.825;QD=20.14;ReadPosRankSum=-2.552;VQSLOD=4.5213;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:36:99:0,104,833	1/1:2,5:7:15.04:160,15,0	0/0:21,0:20:30.51:0,31,224	0/0:20,0:21:4.91:0,5,143	0/0:37,0:37:74.10:0,74,727	1/1:5,16:21:29.48:512,29,0	1/1:1,13:14:20.31:365,20,0	1/1:9,19:28:35.80:532,36,0	1/1:8,18:26:26.49:487,26,0	0/0:18,0:18:38.94:0,39,318	0/0:16,0:16:41.92:0,42,342	0/0:24,0:24:59.91:0,60,493	0/0:26,1:27:39.90:0,40,531	0/0:23,0:23:59.91:0,60,490	0/1:6,17:24:8.16:355,0,8	1/1:6,19:25:4.65:462,5,0	0/0:44,0:45:99:0,119,962	0/0:29,0:29:80.81:0,81,653	1/1:6,12:18:23.22:387,23,0	0/1:5,8:13:0.58:200,0,1	1/1:3,18:21:26.48:484,26,0	0/0:11,0:11:31.78:0,32,251	0/0:10,0:10:29.92:0,30,238	0/0:29,0:28:76.93:0,77,619	0/0:18,0:19:40.98:0,41,326	0/0:16,0:16:35.94:0,36,296	1/1:7,20:27:54.62:587,55,0	0/0:7,0:7:11:0,11,97
chr10	50482823	.	TC	T	4650.35	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=11.182;DP=676;FS=1.213;HRun=1;HaplotypeScore=64.2209;InbreedingCoeff=0.9997;MQ=85.10;MQ0=0;MQRankSum=-2.010;QD=36.91;ReadPosRankSum=1.152;VQSLOD=5.2371;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,114,1745	0/0:11,0:11:33.10:0,33,504	0/0:16,0:16:45.07:0,45,655	0/0:26,0:26:78.06:0,78,1137	0/0:26,0:26:78.27:0,78,1239	0/0:19,0:19:57.19:0,57,905	0/0:33,0:33:99:0,99,1571	1/1:0,26:26:78.23:1040,78,0	0/0:22,0:22:66.21:0,66,1024	0/0:24,0:24:72.20:0,72,1120	0/0:13,0:13:39.13:0,39,622	0/0:25,0:25:75.22:0,75,1139	0/0:25,0:25:75.24:0,75,1167	0/0:25,0:25:75.24:0,75,1175	0/0:25,0:25:75.24:0,75,1169	0/0:18,0:18:54.15:0,54,809	0/0:40,0:40:99:0,120,1832	0/0:37,0:37:99:0,111,1707	1/1:1,11:12:32.94:433,33,0	1/1:0,14:14:39.13:540,39,0	1/1:1,43:44:99:1593,114,0	0/0:24,0:24:72.23:0,72,1123	0/0:14,0:14:42.11:0,42,624	0/0:35,0:35:99:0,105,1611	0/0:28,0:27:84.29:0,84,1340	0/0:16,0:16:48.16:0,48,747	1/1:1,29:30:75.25:1045,75,0	0/0:10,0:10:30.10:0,30,465
chr10	50482970	.	A	AGG	15480.36	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-13.347;DP=582;FS=1.872;HRun=2;HaplotypeScore=70.2651;InbreedingCoeff=0.9917;MQ=85.66;MQ0=0;MQRankSum=-3.812;QD=43.48;ReadPosRankSum=1.148;VQSLOD=4.9079;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,40:45:96.33:1798,96,0	1/1:0,6:6:18.06:334,18,0	0/0:23,0:23:62.74:0,63,846	0/0:15,0:15:42.14:0,42,615	0/0:12,0:12:36.12:0,36,528	1/1:1,11:12:30.10:562,30,0	1/1:4,22:26:42.14:787,42,0	1/1:2,20:22:60.21:1116,60,0	1/1:3,21:25:51.17:953,51,0	0/0:25,0:25:69.23:0,69,1016	0/0:9,0:9:27.09:0,27,396	1/1:2,22:24:57.20:1064,57,0	1/1:0,16:17:39.13:730,39,0	0/0:26,0:26:75.25:0,75,1104	1/1:1,18:19:54.19:1011,54,0	1/1:1,12:13:30.10:562,30,0	0/0:36,0:36:99:0,108,1569	0/0:33,0:33:96.29:0,96,1389	1/1:7,11:18:51.15:842,51,0	1/1:4,3:7:15.05:258,15,0	1/1:14,36:50:99:2193,126,0	1/1:2,12:15:33.11:613,33,0	1/1:1,14:15:29.71:561,30,0	1/1:0,22:24:60.20:1116,60,0	0/0:19,0:19:57.19:0,57,840	0/0:24,0:24:63.21:0,63,927	1/1:1,17:18:54.16:978,54,0	0/0:4,0:4:12.04:0,12,176
chr10	50483045	.	C	CG	5381.18	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-10.646;DP=643;FS=1.609;HRun=3;HaplotypeScore=79.8920;InbreedingCoeff=0.9964;MQ=75.69;MQ0=0;MQRankSum=-1.230;QD=36.36;ReadPosRankSum=-2.257;VQSLOD=4.4610;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,126,1511	0/0:9,0:9:27.08:0,27,324	0/0:9,0:9:18.03:0,18,193	0/0:14,0:14:20.01:0,20,254	0/0:18,0:18:54.17:0,54,647	0/0:16,0:16:45.14:0,45,540	0/0:37,0:37:93.28:0,93,1115	1/1:2,22:24:66.20:892,66,0	0/0:22,0:22:54.15:0,54,636	0/0:28,0:28:84.26:0,84,1008	0/0:14,0:14:39.12:0,39,467	0/0:27,0:27:72.22:0,72,861	0/0:28,0:28:69.21:0,69,827	0/0:19,0:19:54.15:0,54,636	0/0:22,0:22:63.19:0,63,756	0/0:11,0:11:30.09:0,30,360	0/0:33,0:33:96.29:0,96,1152	0/0:27,0:27:72.22:0,72,862	1/1:5,20:25:66.22:917,66,0	1/1:0,15:15:42.14:585,42,0	1/1:5,60:65:99:2248,163,0	0/0:18,0:18:51.16:0,51,611	0/0:13,0:13:30.09:0,30,359	0/0:23,0:23:63.19:0,63,755	0/0:19,0:19:51.11:0,51,586	0/0:27,0:27:72.22:0,72,864	1/1:2,17:19:54.17:739,54,0	0/0:12,0:12:33.10:0,33,396
chr10	50483563	.	CT	C	5111.32	PASS	AB=0.835;AC=35;AF=0.625;AN=56;BaseQRankSum=10.576;DP=672;FS=2.563;HRun=13;HaplotypeScore=107.1039;InbreedingCoeff=0.7214;MQ=77.72;MQ0=3;MQRankSum=-1.088;QD=10.67;ReadPosRankSum=3.563;VQSLOD=4.5407;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,37:39:84.35:704,84,0	1/1:1,9:10:26.84:197,27,0	0/1:30,0:21:5.59:6,0,122	0/0:24,0:16:7.94:0,8,135	0/0:19,0:20:20.11:0,20,246	0/1:5,17:22:12.23:241,0,12	1/1:4,15:22:38.91:258,39,0	1/1:7,1:28:31.24:102,31,0	1/1:4,20:25:56.97:403,57,0	0/0:23,1:25:25.01:0,25,365	0/0:18,0:18:31.81:0,32,311	1/1:4,19:23:56.66:415,57,0	1/1:4,25:29:65.41:481,65,0	0/0:18,1:21:31.76:0,32,417	1/1:4,21:25:50.42:371,50,0	1/1:7,15:22:8.40:246,8,0	0/1:29,2:32:25.34:25,0,542	0/0:26,2:28:22.32:0,22,518	1/1:5,1:18:28.75:96,29,0	1/1:5,0:22:28.67:82,29,0	1/1:1,0:19:18.80:54,19,0	1/1:1,21:22:52.46:377,52,0	1/1:4,18:22:47.36:349,47,0	1/1:5,25:30:68.39:503,68,0	0/0:24,0:25:58.14:0,58,528	0/0:24,2:27:0.25:0,0,284	1/1:7,1:39:62.27:202,62,0	0/0:5,0:5:9.01:0,9,88
chr10	50486619	.	TAC	T	1248.35	PASS	AB=0.844;AC=29;AF=0.630;AN=46;BaseQRankSum=0.573;DP=526;FS=1.950;HRun=0;HaplotypeScore=101.9608;InbreedingCoeff=0.3358;MQ=69.61;MQ0=14;MQRankSum=-0.474;QD=4.25;ReadPosRankSum=1.656;VQSLOD=2.8038;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:36:35.39:0,35,348	./.	./.	./.	1/1:8,4:12:5.85:46,6,0	1/1:8,0:14:11.36:56,11,0	./.	./.	1/1:16,0:23:11.36:56,11,0	1/1:21,3:24:8.14:84,8,0	0/1:13,3:16:20.64:26,0,21	0/0:22,0:22:8.59:0,9,70	0/0:10,0:10:0:0,0,0	1/1:7,4:12:11.86:110,12,0	1/1:11,0:21:14.20:70,14,0	1/1:12,0:20:8.42:42,8,0	1/1:17,3:22:17.71:156,18,0	1/1:13,2:14:11.84:100,12,0	1/1:12,2:14:5.81:34,6,0	0/1:14,1:16:1.46:102,0,1	0/1:12,9:22:11.95:56,0,12	0/0:20,0:20:2.02:0,2,24	0/0:17,0:17:2.51:0,3,41	0/0:18,0:29:8.68:0,9,78	0/1:17,0:17:30.30:68,0,30	0/1:12,4:15:15.01:60,0,15	1/1:8,5:12:15.04:160,15,0	1/1:8,6:14:17.88:174,18,0
chr10	50487722	.	GAC	G	1522.29	PASS	AB=0.923;AC=15;AF=0.268;AN=56;BaseQRankSum=1.639;DP=494;FS=1.056;HRun=0;HaplotypeScore=88.8314;InbreedingCoeff=0.3934;MQ=60.38;MQ0=8;MQRankSum=0.076;QD=7.89;ReadPosRankSum=1.783;VQSLOD=2.8378;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:34.92:0,35,495	1/1:8,0:8:15.39:95,15,0	0/0:32,0:15:41.73:0,42,688	0/0:29,0:16:39.07:0,39,624	0/0:5,0:5:9.03:0,9,143	0/1:18,0:18:4.67:87,0,5	0/1:26,0:26:59.96:113,0,60	0/1:3,8:11:12.89:270,0,13	0/1:24,0:24:6.57:72,0,7	0/0:18,0:18:45.15:0,45,676	0/0:5,0:5:12.04:0,12,175	0/0:20,0:20:39.11:0,39,603	0/0:22,0:22:39.09:0,39,534	0/0:26,0:26:25.86:0,26,381	1/1:20,0:20:23.29:150,23,0	0/1:20,0:20:7.66:67,0,8	0/0:15,0:15:24.08:0,24,345	0/0:20,0:20:45.15:0,45,651	0/1:14,1:15:59.17:226,0,59	1/1:6,0:6:5.86:79,6,0	1/1:28,1:28:31.53:319,32,0	0/0:18,0:18:36.10:0,36,549	0/0:9,0:9:24.06:0,24,347	0/0:29,0:29:65.21:0,65,965	0/0:15,0:15:17.05:0,17,257	0/0:12,0:12:27.56:0,28,445	0/1:15,1:16:87.32:221,0,87	0/0:7,0:7:17.72:0,18,184
chr10	50487726	.	CACAT	C	1010.71	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=-0.718;DP=536;FS=12.742;HRun=0;HaplotypeScore=107.4439;InbreedingCoeff=0.4662;MQ=57.30;MQ0=9;MQRankSum=0.195;QD=4.51;ReadPosRankSum=0.277;VQSLOD=0.9613;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:31.70:0,32,300	1/1:8,1:9:9.57:104,10,0	0/0:31,0:14:39.06:0,39,410	0/0:28,0:15:38.97:0,39,365	0/0:4,0:4:8.99:0,9,74	1/1:18,2:20:7.43:116,7,0	0/1:30,0:30:9.16:326,0,9	0/1:18,0:18:84.48:84,0,133	1/1:31,0:31:7.32:93,7,0	0/0:18,0:18:8.15:0,8,551	0/0:5,0:5:11.93:0,12,93	0/0:26,0:26:44.84:0,45,596	0/0:23,0:23:35.30:0,35,357	0/0:25,0:25:10.82:0,11,278	1/1:22,1:23:8.85:97,9,0	1/1:23,2:25:7.11:116,7,0	0/0:13,0:13:23.83:0,24,263	0/0:20,0:20:50.77:0,51,487	0/1:14,0:14:76.48:76,0,199	1/1:6,0:6:5.54:36,6,0	0/1:29,0:29:56.14:82,0,56	0/0:18,0:18:32.68:0,33,529	0/0:9,0:9:23.64:0,24,276	0/0:30,0:30:59:0,59,750	0/0:17,0:17:15.88:0,16,251	0/0:13,0:13:27.18:0,27,309	0/1:18,0:18:58.01:58,0,231	0/0:8,0:7:14.96:0,15,161
chr10	50487728	.	CAT	C	2071.36	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=-0.065;DP=552;FS=10.876;HRun=0;HaplotypeScore=91.5562;InbreedingCoeff=0.5349;MQ=55.90;MQ0=11;MQRankSum=1.113;QD=7.70;ReadPosRankSum=-0.749;VQSLOD=2.1732;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:31.69:0,32,251	1/1:10,0:10:26.47:275,26,0	0/0:33,0:14:39.06:0,39,410	0/0:30,0:14:38.91:0,39,362	0/0:4,0:4:8.99:0,9,74	1/1:3,16:19:18.03:230,18,0	1/1:25,4:29:35.31:576,35,0	0/1:18,0:18:14.10:144,0,14	1/1:2,28:30:14.96:182,15,0	0/0:20,0:20:3.77:0,4,349	0/0:5,0:5:11.93:0,12,93	0/0:26,0:26:30.60:0,31,379	0/0:24,0:24:35.37:0,35,284	0/1:27,0:27:47.09:47,0,195	1/1:2,20:22:24.04:319,24,0	1/1:4,22:26:14.71:184,15,0	0/0:13,0:13:23.83:0,24,214	0/0:20,0:20:8.03:0,8,292	0/1:14,0:14:39.18:86,0,39	1/1:7,0:6:5.71:37,6,0	1/1:31,0:30:7.57:93,8,0	0/0:18,0:18:33.02:0,33,360	0/0:10,0:10:26.67:0,27,255	0/0:32,0:32:58.95:0,59,529	0/1:17,0:17:7.14:7,0,149	0/0:13,0:13:22.75:0,23,264	0/1:19,0:19:43.83:90,0,44	0/0:9,0:8:4.16:0,4,66
chr10	50487730	.	T	TACACACAC	4321	PASS	AB=0.816;AC=35;AF=0.673;AN=52;BaseQRankSum=-4.482;DP=593;FS=0.000;HRun=0;HaplotypeScore=153.9412;InbreedingCoeff=0.3560;MQ=55.12;MQ0=12;MQRankSum=-2.323;QD=9.60;ReadPosRankSum=-3.603;VQSLOD=2.8966;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:29:5.97:49,6,0	0/1:10,0:10:58.20:58,0,63	./.	0/1:33,0:16:0:0,0,0	1/1:4,3:12:1.93:6,2,0	0/0:18,0:18:18.06:0,18,292	0/1:31,0:31:99:108,0,226	1/1:21,0:21:35.53:263,36,0	0/0:29,0:29:14.67:0,15,220	1/1:21,0:21:38.69:510,39,0	./.	0/1:12,0:27:91.87:105,0,92	1/1:9,0:27:12.46:115,12,0	1/1:26,0:26:25.23:424,25,0	0/0:22,0:22:23.11:0,23,349	0/0:25,0:25:15:0,15,212	0/1:10,4:18:66.12:115,0,66	1/1:22,0:22:23.96:476,24,0	1/1:17,0:17:28.35:318,28,0	0/0:7,0:6:0:0,0,0	1/1:31,0:29:14.53:117,15,0	1/1:9,0:17:23.33:177,23,0	0/1:7,0:10:34.98:60,0,35	0/1:12,0:34:4.44:148,0,4	1/1:17,0:17:12.40:223,12,0	1/1:7,9:21:29.50:474,30,0	1/1:18,0:18:29.31:382,29,0	1/1:3,0:7:9.03:193,9,0
chr10	50487733	.	A	ACACACACACACA	4893	PASS	AB=1.000;AC=30;AF=0.577;AN=52;BaseQRankSum=-6.706;DP=611;FS=3.922;HRun=0;HaplotypeScore=182.9587;InbreedingCoeff=0.2544;MQ=55.17;MQ0=15;MQRankSum=-3.079;QD=11.35;ReadPosRankSum=-5.712;VQSLOD=2.0795;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:2.49:0,2,7	0/1:10,0:10:58.53:59,0,91	./.	0/1:38,0:18:0:1,0,0	0/1:11,0:11:0:0,0,0	0/0:18,0:18:18.06:0,18,413	0/1:31,0:31:99:117,0,330	1/1:19,0:19:35.62:277,36,0	0/0:29,0:29:12.25:0,12,293	1/1:20,0:20:42.27:568,42,0	./.	0/1:27,0:27:99:104,0,158	0/1:26,0:26:1.54:60,0,2	1/1:28,0:28:23.73:585,24,0	0/0:22,0:22:23.09:0,23,481	0/0:28,0:28:14.99:0,15,282	0/1:19,0:19:87.95:298,0,88	1/1:17,5:25:23.96:704,24,0	1/1:18,0:18:30.30:402,30,0	0/0:7,0:6:0:0,0,0	1/1:32,0:30:13.51:130,14,0	0/1:19,0:19:12.57:72,0,13	0/1:8,0:8:36.40:65,0,36	0/1:34,0:34:45.66:65,0,46	1/1:17,0:17:13.92:302,14,0	1/1:21,0:21:30.49:437,30,0	1/1:21,0:21:29.60:526,30,0	1/1:7,0:6:9.03:120,9,0
chr10	50488315	.	TA	T	4497.28	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=3.681;DP=526;FS=3.048;HRun=9;HaplotypeScore=69.1592;InbreedingCoeff=0.9815;MQ=78.51;MQ0=0;MQRankSum=-1.140;QD=22.71;ReadPosRankSum=-0.233;VQSLOD=5.6027;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:25:57.19:0,57,330	1/1:1,5:6:15.01:137,15,0	0/0:17,0:16:42.28:0,42,406	0/0:14,0:15:6.29:0,6,196	0/0:28,0:28:72.21:0,72,828	1/1:1,17:18:42.02:384,42,0	1/1:1,14:15:36.02:329,36,0	1/1:7,26:33:60.22:689,60,0	1/1:0,28:28:75.04:686,75,0	0/0:21,0:21:60.17:0,60,686	0/0:15,0:15:42.10:0,42,473	0/0:2,0:11:16.67:0,17,84	0/0:3,0:17:40.20:0,40,238	0/0:19,0:19:57.17:0,57,653	1/1:1,17:18:42.02:384,42,0	1/1:0,14:14:33.02:302,33,0	0/0:33,0:33:87.26:0,87,1004	0/0:19,0:19:48.13:0,48,544	1/1:1,11:12:33.02:302,33,0	1/1:3,22:25:62.98:568,63,0	1/1:1,13:14:36.02:329,36,0	0/0:6,0:17:40.37:0,40,248	0/0:3,0:27:74.22:0,74,406	0/0:2,0:14:34.24:0,34,183	0/0:18,0:18:54.16:0,54,623	0/0:24,0:24:69.21:0,69,796	1/1:1,14:15:42.02:384,42,0	0/0:8,0:8:24.07:0,24,277
chr10	50488866	.	TG	T	2232.57	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=6.692;DP=558;FS=6.197;HRun=9;HaplotypeScore=57.4670;InbreedingCoeff=0.9232;MQ=74.40;MQ0=0;MQRankSum=0.516;QD=18.30;ReadPosRankSum=3.613;VQSLOD=3.8855;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:31:59.99:0,60,343	1/1:2,6:8:15.01:137,15,0	0/1:14,0:13:3.99:4,0,187	0/0:13,0:12:29.70:0,30,261	0/0:33,0:34:69.01:0,69,756	1/1:2,13:15:39.01:357,39,0	1/1:2,17:19:42.02:384,42,0	0/0:29,0:29:42.06:0,42,445	1/1:1,24:25:66.04:604,66,0	0/0:20,0:20:36.09:0,36,406	0/0:20,0:20:39.01:0,39,420	0/0:22,0:22:51.10:0,51,550	0/0:21,0:21:54.15:0,54,614	0/0:17,0:17:36.10:0,36,405	1/1:2,17:19:51.02:467,51,0	1/1:2,20:22:51.03:467,51,0	0/0:25,1:26:41.73:0,42,724	0/0:22,0:22:54.16:0,54,623	0/0:15,0:15:36.11:0,36,415	0/0:14,0:15:41.94:0,42,454	0/0:25,0:25:57.09:0,57,629	0/0:16,0:16:33.10:0,33,381	0/0:22,0:22:54.15:0,54,615	0/0:17,0:17:48.10:0,48,540	0/0:13,0:13:30.08:0,30,338	0/0:26,1:27:35.70:0,36,648	0/0:22,0:22:60.13:0,60,662	0/0:9,0:9:24.05:0,24,264
chr10	50490838	.	C	CT	5677.58	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=1.169;DP=699;FS=35.720;HRun=0;HaplotypeScore=125.9677;InbreedingCoeff=0.7604;MQ=95.32;MQ0=0;MQRankSum=-6.662;QD=26.29;ReadPosRankSum=2.092;VQSLOD=2.8269;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:14.31:0,14,48	1/1:4,11:15:33.07:449,33,0	0/0:29,0:29:81.27:0,81,1132	0/0:34,0:34:91.26:0,91,1224	0/0:22,0:22:60.16:0,60,787	1/1:4,13:17:44.73:608,45,0	1/1:0,26:26:75.25:1126,75,0	0/0:39,0:39:71.62:0,72,289	1/1:0,22:22:60.20:899,60,0	0/0:28,0:28:72.21:0,72,944	0/0:10,0:10:30.09:0,30,401	0/1:27,0:27:5.30:5,0,39	0/0:29,0:29:15.97:0,16,49	0/0:31,0:31:87.28:0,87,1199	1/1:1,30:31:90.30:1352,90,0	1/1:0,29:28:81.26:1220,81,0	0/0:34,0:34:99:0,102,1407	0/0:28,0:28:78.24:0,78,1071	0/0:17,0:17:19.49:0,19,101	0/0:13,0:13:6.10:0,6,35	0/0:42,0:42:35.70:0,36,93	0/0:16,0:16:15.86:0,16,41	0/1:13,0:13:11.12:17,0,11	0/0:29,0:29:23.81:0,24,63	0/0:18,0:18:48.13:0,48,650	0/0:21,0:21:57.17:0,57,778	0/1:36,0:35:2.15:2,0,22	0/0:11,0:11:32.44:0,32,406
chr10	50490839	.	C	CT	17085.14	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-4.262;DP=741;FS=0.621;HRun=0;HaplotypeScore=101.2155;InbreedingCoeff=0.9996;MQ=95.06;MQ0=0;MQRankSum=-3.314;QD=36.98;ReadPosRankSum=1.553;VQSLOD=4.6887;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,34:43:69.24:1102,69,0	1/1:14,0:17:39:505,39,0	0/0:31,0:31:84.28:0,84,1155	0/0:35,0:35:92.77:0,93,1178	0/0:22,0:22:53.85:0,54,721	1/1:18,0:19:47.72:653,48,0	1/1:26,0:26:75.25:1114,75,0	1/1:3,41:44:99:1665,120,0	1/1:20,0:20:60.20:895,60,0	0/0:29,0:29:74.62:0,75,902	0/0:10,0:10:30.05:0,30,386	1/1:0,26:27:75.25:1185,75,0	1/1:0,30:30:75.26:1197,75,0	0/0:31,0:31:90.22:0,90,1212	1/1:30,0:31:90.30:1336,90,0	1/1:28,0:27:81.26:1189,81,0	0/0:34,0:34:99:0,102,1405	0/0:28,0:28:81.20:0,81,1088	1/1:1,15:16:45.11:646,45,0	1/1:2,14:16:27.09:431,27,0	1/1:3,41:44:81.25:1245,81,0	1/1:1,18:19:38.65:595,39,0	1/1:2,12:15:30.10:462,30,0	1/1:0,31:31:81.28:1294,81,0	0/0:21,0:21:46.39:0,46,623	0/0:27,0:27:57.17:0,57,774	1/1:0,35:35:99:1573,99,0	0/0:11,0:11:30.01:0,30,393
chr10	50491468	.	GC	G	11746.50	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=16.289;DP=717;FS=1.687;HRun=6;HaplotypeScore=128.8107;InbreedingCoeff=0.9984;MQ=77.25;MQ0=0;MQRankSum=-13.470;QD=25.76;ReadPosRankSum=1.713;VQSLOD=3.3612;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,31:38:78.17:830,78,0	1/1:1,10:11:30.08:322,30,0	0/0:29,0:28:54.17:0,54,696	0/0:16,0:16:33.33:0,33,510	0/0:28,0:28:78.24:0,78,1003	1/1:6,21:27:63.14:669,63,0	1/1:6,26:32:81.20:870,81,0	1/1:8,21:29:66.14:690,66,0	1/1:5,23:28:66.14:701,66,0	0/0:27,0:27:78.25:0,78,1026	0/0:26,0:26:72.23:0,72,947	1/1:3,21:24:63.14:668,63,0	1/1:4,29:33:87.22:932,87,0	0/0:24,0:24:66.19:0,66,841	1/1:2,21:23:57.14:612,57,0	1/1:1,25:26:78.20:837,78,0	0/0:22,0:22:66.21:0,66,868	0/0:26,0:26:78.25:0,78,1026	1/1:5,20:25:63.14:670,63,0	1/1:1,30:31:81.20:870,81,0	1/1:8,12:20:18.04:193,18,0	1/1:2,25:27:66.17:709,66,0	1/1:0,26:26:69.17:741,69,0	1/1:4,26:30:62.74:677,63,0	0/0:27,0:27:75.23:0,75,964	0/0:28,0:28:84.27:0,84,1105	1/1:3,23:26:72.15:757,72,0	0/0:8,0:8:24.03:0,24,266
chr10	50491496	.	C	CT	14854.44	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=16.264;DP=658;FS=10.011;HRun=3;HaplotypeScore=130.3653;InbreedingCoeff=0.9948;MQ=66.04;MQ0=0;MQRankSum=-11.965;QD=34.87;ReadPosRankSum=-3.495;VQSLOD=2.1885;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,35:36:99:1404,102,0	1/1:3,13:16:35.92:461,36,0	0/0:12,0:12:23.96:0,24,246	0/0:11,0:12:22.16:0,22,162	0/0:24,0:24:60.18:0,60,719	1/1:2,19:21:60.14:799,60,0	1/1:3,22:25:66.18:886,66,0	1/1:3,18:21:51.17:714,51,0	1/1:0,28:28:75.17:1006,75,0	0/0:26,0:26:66.20:0,66,786	0/0:30,0:30:81.24:0,81,960	1/1:2,27:29:84.27:1154,84,0	1/1:4,33:37:93.28:1279,93,0	0/0:18,0:18:54.17:0,54,648	1/1:3,21:24:66.20:893,66,0	1/1:2,24:26:66.22:919,66,0	0/0:22,0:22:66.19:0,66,779	0/0:27,0:27:78.24:0,78,935	1/1:3,13:16:42.13:574,42,0	1/1:0,27:27:75.15:988,75,0	1/1:2,17:19:39.04:502,39,0	1/1:1,26:27:81.13:1051,81,0	1/1:1,16:17:42.01:520,42,0	1/1:4,28:32:63.14:850,63,0	0/0:25,0:25:69.20:0,69,817	0/0:32,0:32:93.28:0,93,1116	1/1:3,22:25:63.18:856,63,0	0/0:4,0:4:12.04:0,12,144
chr10	50491975	.	C	CCCACTGAGG	38462.19	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=15.220;DP=716;FS=4.484;HRun=0;HaplotypeScore=212.2147;InbreedingCoeff=0.9976;MQ=56.10;MQ0=0;MQRankSum=-19.394;QD=92.46;ReadPosRankSum=-1.939;VQSLOD=4.4917;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:20,23:48:99:4243,99,0	1/1:3,4:8:21.07:871,21,0	0/0:37,0:34:99:0,99,2648	0/0:29,0:28:63.11:0,63,1676	0/0:23,0:23:63.22:0,63,1908	1/1:5,12:18:39.09:1746,39,0	1/1:13,12:22:48.16:2266,48,0	1/1:25,2:28:66.21:2209,66,0	1/1:7,21:29:81.26:3474,81,0	0/0:28,0:28:72.22:0,72,2007	0/0:19,0:19:54.16:0,54,1522	1/1:9,19:29:69.19:2993,69,0	1/1:10,20:32:78.27:3581,78,0	0/0:31,0:31:87.28:0,87,2513	1/1:7,17:24:60.16:2714,60,0	1/1:9,15:27:66.23:3029,66,0	0/0:35,0:35:99:0,102,2970	0/0:33,0:33:96.33:0,96,2915	1/1:18,4:19:45.12:1597,45,0	1/1:11,8:23:45.15:1614,45,0	1/1:15,0:15:21.06:717,21,0	1/1:6,9:16:39.09:1654,39,0	1/1:14,15:29:48.16:2230,48,0	1/1:11,9:21:34.74:1611,35,0	0/0:27,0:27:65.03:0,65,2219	0/0:32,0:32:87.29:0,87,2533	1/1:6,13:20:44.78:1912,45,0	0/0:6,0:6:18.06:0,18,515
chr10	50492553	.	GT	G	1031.05	PASS	AB=0.840;AC=7;AF=0.125;AN=56;BaseQRankSum=13.508;DP=735;FS=12.010;HRun=7;HaplotypeScore=183.4228;InbreedingCoeff=0.2041;MQ=65.73;MQ0=0;MQRankSum=-13.154;QD=6.97;ReadPosRankSum=-0.395;VQSLOD=-0.1544;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,139,1739	0/1:10,4:15:53.56:117,0,54	0/0:31,0:25:45.46:0,45,516	0/0:32,0:30:76.15:0,76,795	0/0:28,0:28:78.24:0,78,969	0/1:25,8:33:60.86:236,0,61	0/1:23,3:26:6.58:214,0,7	0/0:29,0:28:67.45:0,67,823	0/1:22,4:26:42.62:188,0,43	0/0:24,0:24:69.21:0,69,857	0/0:18,0:18:54.16:0,54,667	0/0:26,0:26:75.21:0,75,916	0/0:25,0:25:66.21:0,66,826	0/0:28,0:28:84.27:0,84,1056	0/1:19,3:21:47.79:119,0,48	1/1:20,6:26:9.46:290,9,0	0/0:28,0:28:75.23:0,75,930	0/0:23,0:23:57.11:0,57,670	0/0:21,0:21:54.17:0,54,672	0/0:19,0:19:51.15:0,51,629	0/0:32,0:32:81.26:0,81,1018	0/0:33,0:33:96.30:0,96,1193	0/0:25,0:25:72.23:0,72,905	0/0:36,0:36:99:0,105,1291	0/0:19,0:19:54.17:0,54,679	0/0:27,0:27:75.24:0,75,943	0/0:22,0:22:66.20:0,66,817	0/0:11,0:11:30.10:0,30,377
chr10	50492557	.	T	TTTTTTTGTTGTTGTTG	17396.64	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=14.520;DP=753;FS=2.435;HRun=0;HaplotypeScore=370.8395;InbreedingCoeff=0.9998;MQ=65.31;MQ0=1;MQRankSum=-15.414;QD=110.81;ReadPosRankSum=-0.619;VQSLOD=3.9839;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,136,5237	1/1:10,6:16:45.15:2403,45,0	0/0:33,0:26:34.48:0,34,1256	0/0:34,0:32:79.12:0,79,1799	0/0:28,0:28:78.22:0,78,2674	1/1:26,8:34:80.07:3667,80,0	1/1:25,3:28:34.17:2687,34,0	0/0:27,0:26:66.13:0,66,2000	1/1:20,7:27:75.06:3262,75,0	0/0:27,0:27:69.21:0,69,2502	0/0:18,0:18:51.16:0,51,1968	0/0:29,0:29:84.25:0,84,2687	0/0:24,0:24:66.22:0,66,2497	0/0:28,0:28:84.26:0,84,3272	1/1:21,4:24:63.08:2157,63,0	1/1:22,3:27:75.19:3220,75,0	0/0:29,0:29:75.21:0,75,2786	0/0:21,0:21:60.20:0,60,2231	0/0:20,0:20:56.90:0,57,1794	0/0:19,0:19:54.17:0,54,1901	0/0:30,0:30:81.25:0,81,3049	0/0:32,0:32:93.28:0,93,3321	0/0:26,0:26:78.23:0,78,2713	0/0:36,0:36:99:0,105,3974	0/0:20,0:20:54.18:0,54,2040	0/0:30,0:30:78.25:0,78,3086	0/0:23,0:23:69.11:0,69,2202	0/0:10,0:10:30.10:0,30,1346
chr10	50492560	.	TG	T	1736.65	PASS	AB=0.755;AC=6;AF=0.107;AN=56;BaseQRankSum=11.630;DP=745;FS=2.510;HRun=1;HaplotypeScore=187.7791;InbreedingCoeff=-0.0951;MQ=66.04;MQ0=1;MQRankSum=-9.274;QD=11.50;ReadPosRankSum=-1.786;VQSLOD=1.5238;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,150,1958	0/1:13,3:16:64.18:95,0,64	0/0:34,1:27:17.28:0,17,596	0/0:36,0:34:78.22:0,78,954	0/0:27,0:27:78.22:0,78,1041	0/1:25,9:34:50.67:335,0,51	0/1:15,11:26:45.92:440,0,46	0/0:26,0:25:70.45:0,70,930	0/1:16,9:25:62.18:317,0,62	0/0:26,0:26:78.14:0,78,998	0/0:18,0:18:51.16:0,51,694	0/0:28,0:28:84.24:0,84,1112	0/0:23,0:23:69.21:0,69,941	0/0:28,0:28:84.24:0,84,1119	0/1:17,7:23:82.72:243,0,83	0/1:14,12:26:11.03:432,0,11	0/0:26,0:26:78.20:0,78,1032	0/0:21,0:21:60.13:0,60,806	0/0:19,0:19:56.89:0,57,713	0/0:19,0:19:57.16:0,57,756	0/0:30,0:30:87.25:0,87,1157	0/0:32,0:32:96.28:0,96,1284	0/0:26,0:26:78.21:0,78,1033	0/0:41,0:41:99:0,120,1547	0/0:20,0:20:60.17:0,60,794	0/0:28,0:28:84.24:0,84,1119	0/0:23,0:23:68.94:0,69,874	0/0:10,0:10:30.10:0,30,418
chr10	50492567	.	TTG	T	629.30	PASS	AB=0.788;AC=6;AF=0.107;AN=56;BaseQRankSum=10.874;DP=727;FS=21.680;HRun=0;HaplotypeScore=201.2776;InbreedingCoeff=-0.1200;MQ=65.72;MQ0=1;MQRankSum=-11.082;QD=4.66;ReadPosRankSum=0.631;VQSLOD=1.2450;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,156,2703	0/1:13,3:16:48.85:49,0,360	0/0:34,0:27:60.15:0,60,1214	0/0:36,0:35:83.84:0,84,1479	0/0:22,0:22:66.23:0,66,1312	0/1:23,4:28:38.22:38,0,479	0/1:11,8:20:99:202,0,272	0/0:31,0:30:83.34:0,83,1127	0/1:16,7:23:99:131,0,343	0/0:26,0:26:78.25:0,78,1488	0/0:14,0:14:42.14:0,42,838	0/0:30,0:30:89.98:0,90,1448	0/0:24,0:24:72.14:0,72,1215	0/0:26,0:26:78.27:0,78,1549	0/1:17,6:22:99:104,0,319	0/1:14,9:25:99:230,0,243	0/0:26,0:26:78.22:0,78,1508	0/0:21,0:21:60.20:0,60,1153	0/0:20,0:20:56.89:0,57,863	0/0:21,0:21:60.07:0,60,991	0/0:32,0:32:96.04:0,96,1557	0/0:32,0:32:96.05:0,96,1535	0/0:26,0:26:77.69:0,78,1254	0/0:42,0:42:99:0,120,2038	0/0:18,0:18:54.19:0,54,1063	0/0:29,0:29:87.29:0,87,1691	0/0:19,0:19:51.81:0,52,952	0/0:10,0:10:30.10:0,30,609
chr10	50492570	.	G	GT	2667.12	PASS	AB=0.651;AC=10;AF=0.179;AN=56;BaseQRankSum=12.863;DP=724;FS=4.310;HRun=2;HaplotypeScore=180.9896;InbreedingCoeff=0.8061;MQ=66.61;MQ0=1;MQRankSum=-11.010;QD=19.19;ReadPosRankSum=0.735;VQSLOD=3.5056;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,138,707	1/1:3,13:16:26.24:462,26,0	0/0:32,1:26:61.37:0,61,720	0/0:39,0:37:54.75:0,55,853	0/0:22,0:22:66.19:0,66,804	1/1:6,20:26:44.29:667,44,0	0/1:11,10:21:1.90:296,0,2	0/0:28,0:27:54.06:0,54,217	1/1:8,17:25:31.82:537,32,0	0/0:25,0:25:75.23:0,75,919	0/0:15,0:15:42.12:0,42,509	0/0:28,0:28:49.68:0,50,324	0/0:24,0:24:42.04:0,42,274	0/0:25,0:25:75.24:0,75,928	0/1:10,15:24:12.93:428,0,13	1/1:12,14:26:10.97:442,11,0	0/0:27,0:27:81.16:0,81,935	0/0:19,0:19:54.17:0,54,666	0/0:19,0:19:47.35:0,47,205	0/0:21,0:21:54.62:0,55,243	0/0:34,0:34:62.15:0,62,377	0/0:30,0:30:74.91:0,75,362	0/0:26,0:26:57.10:0,57,290	0/0:42,0:42:82.77:0,83,490	0/0:18,0:18:51.16:0,51,631	0/0:28,0:28:81.25:0,81,1004	0/0:19,0:19:31.46:0,31,224	0/0:11,0:11:33.08:0,33,394
chr10	50494281	.	GTCTCTCTCTC	G	3054.73	PASS	AB=0.888;AC=24;AF=0.429;AN=56;BaseQRankSum=9.374;DP=689;FS=18.547;HRun=0;HaplotypeScore=203.9429;InbreedingCoeff=0.7414;MQ=65.73;MQ0=29;MQRankSum=-8.046;QD=9.85;ReadPosRankSum=3.641;VQSLOD=1.1146;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:19,13:31:6.22:102,6,0	1/1:5,0:9:12.04:279,12,0	0/1:57,0:23:0:0,0,0	0/0:67,0:26:0.89:0,1,2	0/0:24,0:23:24.06:0,24,506	1/1:15,0:23:18.06:419,18,0	1/1:14,0:24:6.02:140,6,0	0/0:47,0:45:15.25:0,15,74	1/1:5,0:14:21.07:488,21,0	0/0:20,0:20:18.79:0,19,661	0/0:6,0:6:6.01:0,6,113	1/1:12,5:17:9.03:266,9,0	1/1:20,5:25:5.31:176,5,0	0/0:25,0:25:26.89:0,27,1114	1/1:12,0:19:21.07:488,21,0	1/1:10,0:19:21.07:488,21,0	0/0:26,0:26:36.12:0,36,1441	0/0:20,0:20:27.05:0,27,815	0/0:23,0:23:24.93:0,25,878	0/0:19,0:19:15.51:0,16,377	0/0:29,0:28:33.06:0,33,916	1/1:13,11:23:8.84:149,9,0	1/1:3,11:14:5.70:124,6,0	0/1:22,1:31:32.42:134,0,32	0/0:20,0:20:9.03:0,9,346	0/0:22,0:21:21.07:0,21,783	0/0:22,0:21:51.15:0,51,2003	0/0:5,0:4:3.01:0,3,149
chr10	50498221	.	A	AACC	750.40	PASS	AB=0.876;AC=7;AF=0.125;AN=56;BaseQRankSum=5.802;DP=493;FS=3.634;HRun=0;HaplotypeScore=91.4454;InbreedingCoeff=0.1864;MQ=61.81;MQ0=13;MQRankSum=-4.825;QD=8.93;ReadPosRankSum=0.311;VQSLOD=2.9444;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:11,0:12:22.84:63,0,23	0/0:5,0:5:8.99:0,9,95	0/0:53,0:13:18.92:0,19,319	0/0:51,0:17:32.79:0,33,334	0/0:15,0:15:42.11:0,42,567	0/0:18,0:18:42.06:0,42,535	0/0:16,0:16:48.10:0,48,626	0/0:29,0:28:36.98:0,37,421	0/0:5,0:5:15.05:0,15,191	0/0:20,0:20:60.16:0,60,823	0/0:21,0:21:60.19:0,60,837	1/1:13,3:16:3.18:142,3,0	0/1:9,1:10:50.27:82,0,50	0/0:11,0:11:33.10:0,33,465	0/0:10,0:10:24.08:0,24,357	0/0:11,0:11:30.10:0,30,421	0/0:23,0:22:51.64:0,52,732	0/0:23,0:22:53.89:0,54,690	0/0:11,0:10:12.29:0,12,147	0/0:21,0:20:44.76:0,45,388	0/0:8,0:7:8.99:0,9,95	0/1:13,2:14:50.20:140,0,50	0/1:16,3:18:7.68:325,0,8	0/1:9,3:11:3.11:125,0,3	0/0:13,0:13:30.04:0,30,382	0/0:25,0:23:66.21:0,66,920	0/0:9,0:9:5.02:0,5,127	0/0:11,0:11:24.05:0,24,313
chr10	50498222	.	A	ACC	506.55	PASS	AB=0.952;AC=7;AF=0.125;AN=56;BaseQRankSum=4.865;DP=492;FS=5.499;HRun=0;HaplotypeScore=86.0116;InbreedingCoeff=0.1966;MQ=61.87;MQ0=13;MQRankSum=-3.914;QD=6.18;ReadPosRankSum=-0.277;VQSLOD=2.4564;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:10,2:12:20.31:74,0,20	0/0:5,0:5:9.01:0,9,98	0/0:53,0:13:33.12:0,33,332	0/0:51,0:17:34.06:0,34,309	0/0:15,0:15:45.13:0,45,628	0/0:18,0:18:42.10:0,42,585	0/0:16,0:16:48.15:0,48,657	0/0:29,0:28:52.44:0,52,527	0/0:5,0:5:15.04:0,15,196	0/0:20,0:20:60.19:0,60,871	0/0:22,0:22:60.19:0,60,849	1/1:16,0:16:1.16:103,1,0	0/1:10,0:10:49.21:81,0,49	0/0:11,0:11:33.11:0,33,498	0/0:11,0:11:24.08:0,24,376	0/0:10,0:10:30.09:0,30,436	0/0:23,0:22:51.64:0,52,749	0/0:22,0:21:54.16:0,54,735	0/0:11,0:10:20.49:0,20,203	0/0:21,0:20:47.06:0,47,493	0/0:8,0:7:7.26:0,7,78	0/1:14,0:13:36.95:37,0,92	0/1:17,2:18:11.94:224,0,12	0/1:11,0:10:0.02:112,0,0	0/0:14,0:14:30.06:0,30,418	0/0:25,0:23:66.21:0,66,936	0/0:9,0:9:17.92:0,18,172	0/0:11,0:11:24.06:0,24,339
chr10	50498227	.	C	CAA	1983.53	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=5.652;DP=502;FS=1.044;HRun=10;HaplotypeScore=89.5116;InbreedingCoeff=0.9175;MQ=63.10;MQ0=14;MQRankSum=-5.349;QD=12.48;ReadPosRankSum=-1.023;VQSLOD=1.6564;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:12:9:82,9,0	0/0:5,0:5:8.97:0,9,74	0/0:59,0:18:21.24:0,21,226	0/0:54,0:17:18.36:0,18,126	0/0:16,0:16:32.74:0,33,311	0/0:18,0:18:32.76:0,33,332	0/0:15,0:15:20.18:0,20,268	1/1:17,9:27:36.38:557,36,0	0/0:4,0:5:11.73:0,12,97	0/0:20,0:20:56.59:0,57,553	0/0:22,0:22:11.22:0,11,335	1/1:12,0:17:32.03:237,32,0	1/1:9,0:11:19.88:127,20,0	0/0:13,0:13:27.02:0,27,268	0/0:11,0:11:15.02:0,15,151	0/0:10,0:10:27.05:0,27,274	0/0:24,0:23:50.51:0,51,482	0/0:24,0:23:32.15:0,32,455	1/1:5,4:10:17.03:196,17,0	1/1:11,8:19:30.49:378,30,0	1/1:4,2:5:2.97:20,3,0	1/1:11,0:13:21.48:154,21,0	1/1:16,0:18:32.66:262,33,0	1/1:10,0:10:14.52:97,15,0	0/0:12,0:12:24.05:0,24,244	0/0:25,0:23:46.98:0,47,500	1/1:8,1:10:6.02:90,6,0	0/0:10,0:10:11.93:0,12,172
chr10	50498943	.	A	AAG	2711.50	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-1.513;DP=656;FS=0.462;HRun=0;HaplotypeScore=119.5719;InbreedingCoeff=0.9375;MQ=61.23;MQ0=11;MQRankSum=-2.199;QD=9.62;ReadPosRankSum=-2.853;VQSLOD=2.9879;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:45,2:47:8.85:150,9,0	0/0:11,0:11:29.92:0,30,243	0/0:32,0:19:47.98:0,48,455	0/0:37,0:21:31.96:0,32,321	0/0:24,0:24:36.16:0,36,518	0/0:20,0:20:41.92:0,42,345	0/0:29,0:29:68.96:0,69,558	1/1:36,0:35:72.46:714,72,0	0/0:25,0:24:56.27:0,56,450	0/0:27,0:27:74.57:0,75,679	0/0:10,0:10:26.97:0,27,253	1/1:16,0:16:9.03:116,9,0	1/1:20,2:22:17.75:236,18,0	0/0:20,0:20:51:0,51,523	0/0:30,0:30:66.36:0,66,546	0/0:22,0:22:56.95:0,57,487	0/0:27,0:27:72.29:0,72,632	0/0:16,0:15:32.40:0,32,400	1/1:17,0:17:34.53:343,35,0	1/1:14,0:14:18.17:194,18,0	1/1:28,0:28:25.45:253,25,0	1/1:25,2:27:8.16:147,8,0	1/1:3,8:12:5.76:81,6,0	1/1:44,1:44:32.76:402,33,0	0/0:19,0:19:11.60:0,12,374	0/0:20,0:19:47.93:0,48,460	1/1:18,0:18:13.43:292,13,0	0/0:4,0:4:8.98:0,9,73
chr10	50498945	.	GACAC	G	2050.96	PASS	AB=0.970;AC=15;AF=0.288;AN=52;BaseQRankSum=2.179;DP=702;FS=11.032;HRun=0;HaplotypeScore=135.4499;InbreedingCoeff=0.6253;MQ=59.57;MQ0=12;MQRankSum=3.187;QD=9.04;ReadPosRankSum=0.343;VQSLOD=2.1377;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:9,0:52:37.07:37,0,94	1/1:7,2:11:12.03:169,12,0	./.	./.	0/0:25,0:26:42.11:0,42,831	1/1:9,7:18:5.09:182,5,0	1/1:14,15:29:21.03:491,21,0	0/0:36,0:35:44.99:0,45,522	1/1:18,6:25:20.97:279,21,0	0/0:28,0:28:35.93:0,36,549	0/0:9,0:10:14.75:0,15,203	0/0:2,0:21:12.04:0,12,196	0/0:5,0:25:14.78:0,15,227	0/0:22,0:25:22.62:0,23,679	1/1:14,13:29:30.09:442,30,0	1/1:9,14:23:36.12:564,36,0	0/0:27,0:31:47.06:0,47,688	0/1:19,0:18:7.11:7,0,574	0/0:21,0:21:18.32:0,18,205	0/0:15,0:15:12.01:0,12,153	0/0:30,0:30:5.06:0,5,94	0/0:4,0:28:13.11:0,13,203	0/0:13,0:14:6.02:0,6,96	0/0:5,0:48:25.40:0,25,467	0/1:16,2:20:57.95:58,0,517	0/0:22,0:20:27.94:0,28,576	0/0:20,0:20:17.84:0,18,245	0/0:4,0:4:5.73:0,6,34
chr10	50499578	.	CATAT	C	1990.20	PASS	AB=0.876;AC=19;AF=0.365;AN=52;BaseQRankSum=4.618;DP=516;FS=5.035;HRun=0;HaplotypeScore=150.8645;InbreedingCoeff=0.6898;MQ=51.11;MQ0=10;MQRankSum=-0.879;QD=8.54;ReadPosRankSum=-5.536;VQSLOD=0.8030;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:16,0:26:0.07:0,0,0	0/0:5,0:6:6.01:0,6,104	./.	0/0:3,0:3:3.01:0,3,46	0/0:16,0:18:38.92:0,39,828	0/0:22,0:21:9.03:0,9,213	0/0:18,0:17:15.01:0,15,262	1/1:17,21:29:59.27:664,59,0	0/0:26,0:25:29.57:0,30,302	0/0:24,0:25:50.96:0,51,1070	0/0:18,0:18:18.78:0,19,557	1/1:17,0:19:14.87:188,15,0	1/1:15,0:16:26.64:271,27,0	0/0:12,0:12:24.08:0,24,572	0/0:13,0:10:9.03:0,9,129	0/0:17,0:17:14.81:0,15,161	0/0:43,0:44:99:0,102,1877	0/1:20,0:22:0.22:0,0,737	1/1:21,0:20:26.17:503,26,0	0/1:27,0:27:15.95:148,0,16	1/1:9,0:9:6.01:71,6,0	./.	1/1:22,0:19:6.02:89,6,0	1/1:13,0:13:6.02:75,6,0	0/0:12,0:12:24.04:0,24,345	0/0:26,0:26:57.70:0,58,1078	1/1:18,0:18:2.32:158,2,0	0/0:10,0:10:29.46:0,29,647
chr10	50500694	.	TTGGA	T	4731.04	PASS	AB=0.788;AC=16;AF=0.296;AN=54;BaseQRankSum=11.305;DP=743;FS=34.349;HRun=0;HaplotypeScore=183.8908;InbreedingCoeff=-0.2922;MQ=44.10;MQ0=58;MQRankSum=-10.637;QD=10.63;ReadPosRankSum=0.469;VQSLOD=2.5631;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:29,4:29:99:176,0,1675	1/1:1,4:5:0.11:177,0,0	0/0:23,0:1:2.88:0,3,15	./.	0/0:30,0:30:84.29:0,84,2345	0/1:5,4:9:38.23:225,0,38	0/1:6,6:8:9.12:234,0,9	0/0:42,0:30:90.31:0,90,2528	0/1:10,8:18:78.38:451,0,78	0/0:44,0:42:99:0,126,3552	0/0:22,0:22:60.21:0,60,1660	0/1:25,11:34:99:538,0,1589	0/1:18,4:20:99:206,0,729	0/0:25,0:25:75.26:0,75,2165	0/1:11,10:20:77.91:573,0,78	0/1:17,9:23:99:445,0,105	0/0:20,0:20:60.18:0,60,1627	0/0:14,0:14:42.14:0,42,1172	0/1:37,6:26:99:242,0,1496	0/1:51,3:51:60.56:61,0,2928	0/1:63,2:54:1.93:2,0,3439	0/1:19,7:23:99:337,0,489	0/1:10,10:18:99:393,0,398	0/0:12,0:11:21.07:0,21,552	0/0:20,0:20:60.21:0,60,1703	0/0:24,0:22:66.23:0,66,1864	0/1:42,13:48:99:673,0,2603	0/0:6,0:6:18.06:0,18,521
chr10	50501881	.	CTT	C	2752.28	PASS	AB=0.714;AC=33;AF=0.589;AN=56;BaseQRankSum=5.342;DP=507;FS=5.901;HRun=15;HaplotypeScore=78.5429;InbreedingCoeff=0.9033;MQ=77.16;MQ0=3;MQRankSum=2.484;QD=10.55;ReadPosRankSum=3.924;VQSLOD=2.6194;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,12:21:11.08:179,11,0	1/1:1,5:6:14.99:132,15,0	0/0:54,0:23:22.76:0,23,196	0/0:26,0:16:21.48:0,21,213	0/0:23,0:26:66.03:0,66,780	1/1:3,16:20:32.69:276,33,0	1/1:8,0:9:11.55:126,12,0	1/1:8,0:32:63.08:353,63,0	1/1:2,7:11:8.57:109,9,0	0/0:12,0:16:41.38:0,41,457	0/0:16,0:18:37.78:0,38,406	1/1:3,15:18:29.95:264,30,0	1/1:2,6:8:14.95:126,15,0	0/0:5,0:5:14.78:0,15,165	1/1:2,7:11:17.55:132,18,0	1/1:5,7:13:17.68:144,18,0	0/0:21,1:28:38.17:0,38,673	0/0:12,0:14:26.71:0,27,367	1/1:4,1:15:20.16:142,20,0	1/1:3,1:26:32.62:283,33,0	0/1:3,0:5:6.89:7,0,17	1/1:2,8:12:20.36:155,20,0	1/1:4,13:17:19.86:227,20,0	1/1:0,5:5:12:106,12,0	0/0:21,0:25:53.12:0,53,614	0/0:11,0:12:26.57:0,27,335	1/1:7,4:32:21.21:216,21,0	0/0:19,0:22:40.46:0,40,455
chr10	50502485	.	T	TA	5961.10	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=15.411;DP=682;FS=1.522;HRun=2;HaplotypeScore=80.2098;InbreedingCoeff=0.9989;MQ=91.44;MQ0=0;MQRankSum=-3.440;QD=38.71;ReadPosRankSum=2.824;VQSLOD=5.3997;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,25:28:78.22:1093,78,0	0/0:9,0:9:27.08:0,27,335	0/0:28,0:28:81.23:0,81,970	0/0:28,0:28:74.03:0,74,875	0/0:28,0:28:84.25:0,84,1029	0/0:24,0:24:69.14:0,69,853	0/0:21,0:21:63.20:0,63,780	0/0:34,0:34:99:0,99,1207	0/0:26,0:26:75.21:0,75,904	0/0:32,0:32:90.28:0,90,1113	0/0:16,0:16:48.15:0,48,594	1/1:2,22:24:66.18:927,66,0	1/1:4,24:28:72.24:1036,72,0	0/0:24,0:24:72.23:0,72,893	0/0:23,0:23:66.19:0,66,806	0/0:15,0:15:45.14:0,45,558	0/0:30,0:30:84.26:0,84,1040	0/0:14,0:14:36.11:0,36,445	0/0:27,0:27:75.23:0,75,919	0/0:31,0:31:90.28:0,90,1116	0/0:29,0:29:84.25:0,84,1028	1/1:4,24:28:81.26:1147,81,0	1/1:2,18:20:54.17:759,54,0	1/1:3,23:26:41.06:999,41,0	0/0:25,0:25:75.23:0,75,918	0/0:30,0:30:87.25:0,87,1056	0/0:27,0:27:81.25:0,81,1004	0/0:7,0:7:21.07:0,21,260
chr10	50502554	.	C	CT	5901.57	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-5.861;DP=676;FS=8.413;HRun=1;HaplotypeScore=66.5654;InbreedingCoeff=0.9991;MQ=83.25;MQ0=0;MQRankSum=-2.450;QD=42.15;ReadPosRankSum=0.312;VQSLOD=4.9273;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,25:27:78.26:1168,78,0	0/0:7,0:7:21.07:0,21,273	0/0:20,0:20:54.17:0,54,692	0/0:21,0:21:53.20:0,53,656	0/0:36,0:36:99:0,105,1355	0/0:20,0:20:60.20:0,60,779	0/0:19,0:19:57.19:0,57,739	0/0:33,0:33:96.31:0,96,1234	0/0:23,0:23:69.22:0,69,896	0/0:42,0:42:99:0,126,1621	0/0:21,0:21:63.20:0,63,818	1/1:4,13:17:48.16:715,48,0	1/1:0,29:29:84.24:1233,84,0	0/0:26,0:26:78.25:0,78,1013	0/0:22,0:22:66.21:0,66,856	0/0:23,0:23:63.19:0,63,805	0/0:34,0:34:99:0,99,1285	0/0:20,0:20:60.19:0,60,778	0/0:36,0:36:99:0,108,1391	0/0:28,0:28:84.26:0,84,1077	0/0:20,0:20:60.19:0,60,779	1/1:1,20:21:63.20:923,63,0	1/1:1,22:23:66.18:964,66,0	1/1:0,23:23:59.79:898,60,0	0/0:24,0:24:69.20:0,69,879	0/0:28,0:28:81.26:0,81,1052	0/0:21,0:21:63.19:0,63,802	0/0:12,0:12:36.09:0,36,450
chr10	50503092	.	C	CG	5909.71	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-4.488;DP=655;FS=3.033;HRun=2;HaplotypeScore=88.6687;InbreedingCoeff=0.9937;MQ=82.04;MQ0=0;MQRankSum=-4.881;QD=39.14;ReadPosRankSum=2.195;VQSLOD=5.1997;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,25:31:81.27:1160,81,0	0/0:12,0:12:33.09:0,33,395	0/0:24,0:24:69.16:0,69,797	0/0:15,0:15:39.05:0,39,442	0/0:30,0:30:90.28:0,90,1114	0/0:31,0:31:93.27:0,93,1137	0/0:16,0:16:48.14:0,48,582	0/0:36,0:36:99:0,99,1196	0/0:27,0:27:75.19:0,75,902	0/0:33,0:33:93.29:0,93,1153	0/0:22,0:22:63.20:0,63,780	1/1:1,22:23:66.22:948,66,0	1/1:1,26:27:81.27:1161,81,0	0/0:19,0:19:57.18:0,57,706	0/0:24,0:24:66.21:0,66,818	0/0:25,0:25:66.15:0,66,779	0/0:16,0:16:48.15:0,48,595	0/0:21,0:21:60.19:0,60,743	0/0:21,0:21:60.18:0,60,733	0/0:29,0:29:78.23:0,78,953	0/0:24,0:24:63.20:0,63,780	1/1:2,27:29:81.24:1117,81,0	1/1:2,20:22:60.20:852,60,0	1/1:2,17:18:47.96:671,48,0	0/0:20,0:20:60.15:0,60,717	0/0:27,0:27:75.23:0,75,927	0/0:28,0:27:81.15:0,81,980	0/0:4,0:4:12.04:0,12,149
chr10	50503139	.	G	GA	7210.39	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-0.611;DP=617;FS=0.000;HRun=9;HaplotypeScore=86.0398;InbreedingCoeff=0.9751;MQ=76.37;MQ0=0;MQRankSum=-3.741;QD=18.30;ReadPosRankSum=0.740;VQSLOD=4.8095;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,24:33:69.56:729,70,0	1/1:1,6:7:18.05:199,18,0	0/0:19,0:19:41.98:0,42,363	0/0:12,0:13:23.73:0,24,194	0/0:32,0:32:86.97:0,87,755	1/1:6,19:25:31.10:571,31,0	1/1:4,10:14:27.07:299,27,0	1/1:8,0:25:32.76:169,33,0	1/1:5,18:23:5.04:512,5,0	0/0:30,0:30:77.95:0,78,673	0/0:18,0:18:38.98:0,39,339	1/1:10,16:26:51.14:564,51,0	1/1:6,20:26:60.09:635,60,0	0/0:23,0:23:65.97:0,66,569	1/1:3,24:27:46.27:737,46,0	1/1:5,11:16:26.91:299,27,0	0/0:24,0:24:59.94:0,60,513	0/0:18,0:18:50.99:0,51,443	1/1:10,0:29:34.94:188,35,0	1/1:4,0:31:66.97:346,67,0	1/1:1,0:16:25.81:130,26,0	1/1:6,19:26:53.24:624,53,0	1/1:2,18:20:48.13:530,48,0	1/1:6,14:19:21.09:437,21,0	0/0:17,0:18:47.03:0,47,397	0/0:24,0:24:56.98:0,57,495	1/1:8,0:29:48.37:243,48,0	0/0:4,0:4:12:0,12,104
chr10	50504584	.	T	TA	3992.31	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-12.584;DP=604;FS=0.000;HRun=7;HaplotypeScore=54.3236;InbreedingCoeff=0.9944;MQ=77.56;MQ0=0;MQRankSum=-0.469;QD=31.44;ReadPosRankSum=-2.884;VQSLOD=2.6495;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:60.06:0,60,568	0/0:9,0:9:24.04:0,24,232	0/0:10,0:10:15.02:0,15,145	0/0:16,0:16:33.42:0,33,303	0/0:28,0:28:81.10:0,81,771	0/0:18,0:18:51.05:0,51,480	0/0:10,0:10:30.05:0,30,290	1/1:4,25:29:72.19:845,72,0	0/0:24,0:24:66.10:0,66,637	0/0:28,0:28:81.12:0,81,779	0/0:17,0:17:48.06:0,48,457	0/0:23,0:23:63.10:0,63,608	0/0:17,0:17:42:0,42,386	0/0:22,0:22:57.08:0,57,546	0/0:35,0:35:99:0,102,954	0/0:35,0:35:90.14:0,90,869	0/0:21,0:21:60.06:0,60,566	0/0:9,0:9:21.03:0,21,203	1/1:2,13:15:39.09:449,39,0	1/1:3,29:32:90.24:1067,90,0	1/1:1,18:19:54.17:652,54,0	0/0:20,0:20:48.06:0,48,458	0/0:24,0:24:63.09:0,63,603	0/0:15,0:15:45.07:0,45,435	0/0:28,0:28:78.11:0,78,748	0/0:35,0:35:96.14:0,96,921	1/1:1,31:32:81.25:979,81,0	0/0:9,0:9:27.04:0,27,261
chr10	50505107	.	GTATATA	G	9076.42	PASS	AB=0.685;AC=31;AF=0.554;AN=56;BaseQRankSum=14.441;DP=700;FS=4.707;HRun=0;HaplotypeScore=199.2490;InbreedingCoeff=0.6104;MQ=55.39;MQ0=0;MQRankSum=-12.701;QD=19.56;ReadPosRankSum=-1.572;VQSLOD=3.6288;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,10:16:15.52:331,16,0	1/1:1,9:10:12.04:264,12,0	0/1:8,0:5:0:0,0,0	0/1:15,0:8:0.40:1,0,0	0/0:24,0:26:75.26:0,75,2302	1/1:4,19:25:39.60:860,40,0	1/1:3,8:11:15.02:330,15,0	0/1:17,0:48:32.34:80,0,32	1/1:3,15:19:36.12:782,36,0	0/0:36,0:38:99:0,108,3442	0/0:34,0:38:99:0,102,3123	1/1:7,24:31:39.13:859,39,0	1/1:6,32:38:72.25:1586,72,0	0/0:18,0:21:60.20:0,60,1890	1/1:2,36:38:66.23:1432,66,0	1/1:7,31:38:84.29:1829,84,0	0/0:14,0:14:33.11:0,33,1123	0/0:7,0:8:18.03:0,18,469	0/1:2,0:12:19.39:21,0,19	0/1:7,0:37:11.25:59,0,11	1/1:5,0:22:6.13:17,6,0	1/1:1,16:17:9.03:198,9,0	1/1:3,18:21:15.05:331,15,0	0/1:2,12:14:0:0,0,0	0/0:30,0:33:87.30:0,87,2747	0/0:38,0:45:99:0,129,3931	0/1:8,1:43:23.05:96,0,23	0/0:9,0:12:30.10:0,30,872
chr10	50505376	.	TATGTCC	T	7431.55	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=14.626;DP=802;FS=0.783;HRun=0;HaplotypeScore=169.6877;InbreedingCoeff=0.9963;MQ=79.06;MQ0=0;MQRankSum=-16.259;QD=46.74;ReadPosRankSum=-0.716;VQSLOD=4.6168;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,17:20:24.04:503,24,0	0/0:15,0:15:42.14:0,42,1429	0/0:23,0:23:69.24:0,69,2207	0/0:22,0:22:57.20:0,57,1752	0/0:35,0:35:87.30:0,87,2980	0/0:35,0:35:99:0,99,3343	0/0:13,0:13:36.12:0,36,1174	0/0:45,0:45:99:0,132,4267	0/0:30,0:30:84.29:0,84,2912	0/0:45,0:45:99:0,132,4577	0/0:43,0:43:99:0,126,4409	1/1:0,31:31:75.26:1746,75,0	1/1:2,41:43:99:2292,99,0	0/0:35,0:35:99:0,102,3524	0/0:44,0:44:99:0,126,4352	0/0:33,0:33:99:0,99,3476	0/0:13,0:13:36.12:0,36,1269	0/0:12,0:12:30.10:0,30,1041	0/0:20,0:20:57.18:0,57,1830	0/0:42,0:42:99:0,123,4108	0/0:30,0:30:87.30:0,87,3020	1/1:4,16:20:42.14:941,42,0	1/1:2,26:28:69.15:1599,69,0	1/1:3,14:17:15.25:350,15,0	0/0:27,0:27:72.25:0,72,2518	0/0:34,0:34:99:0,102,3443	0/0:30,0:30:84.29:0,84,2922	0/0:17,0:17:48.16:0,48,1681
chr10	50506121	.	G	GT	6199.83	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-14.817;DP=807;FS=5.626;HRun=2;HaplotypeScore=73.1644;InbreedingCoeff=1.0000;MQ=92.19;MQ0=0;MQRankSum=-5.355;QD=38.04;ReadPosRankSum=-3.107;VQSLOD=4.1030;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:84.26:0,84,1039	0/0:13,0:13:39.10:0,39,468	0/0:36,0:36:90.21:0,90,1069	0/0:31,0:32:84.02:0,84,976	0/0:37,0:37:99:0,105,1294	0/0:32,0:32:93.27:0,93,1127	0/0:19,0:19:54.16:0,54,657	1/1:2,35:37:99:1443,102,0	0/0:24,0:24:69.19:0,69,830	0/0:36,0:36:99:0,105,1300	0/0:25,0:25:75.12:0,75,894	0/0:36,0:36:99:0,105,1288	0/0:26,0:26:75.21:0,75,903	0/0:34,0:34:99:0,99,1199	0/0:41,0:41:99:0,123,1481	0/0:41,0:41:99:0,120,1438	0/0:32,0:32:93.27:0,93,1136	0/0:12,0:12:36.11:0,36,444	1/1:1,35:36:99:1426,105,0	1/1:3,30:33:93.16:1249,93,0	1/1:4,29:33:75.25:1080,75,0	0/0:30,0:30:87.25:0,87,1063	0/0:20,0:20:60.18:0,60,732	0/0:20,0:20:54.13:0,54,651	0/0:25,0:24:69.20:0,69,840	0/0:29,0:29:81.25:0,81,1003	1/1:1,21:23:72.16:1002,72,0	0/0:16,0:16:48.15:0,48,595
chr10	50509780	.	CAGA	C	5647.87	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=15.290;DP=753;FS=0.000;HRun=0;HaplotypeScore=117.3822;InbreedingCoeff=0.9999;MQ=77.42;MQ0=0;MQRankSum=-4.424;QD=36.67;ReadPosRankSum=-0.066;VQSLOD=5.5161;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,108,2405	0/0:12,0:12:36.12:0,36,754	0/0:17,0:17:42.06:0,42,774	0/0:18,0:18:42.14:0,42,818	0/0:28,0:28:78.27:0,78,1705	0/0:21,0:21:57.20:0,57,1270	0/0:30,0:30:81.26:0,81,1760	1/1:7,25:32:72.20:1120,72,0	0/0:23,0:23:69.22:0,69,1483	0/0:29,0:29:84.29:0,84,1870	0/0:16,0:16:45.15:0,45,1000	0/0:34,0:34:99:0,99,2153	0/0:38,0:38:99:0,114,2529	0/0:34,0:34:99:0,99,2147	0/0:34,0:34:99:0,102,2276	0/0:36,0:36:99:0,99,2169	0/0:24,0:24:72.21:0,72,1562	0/0:15,0:15:39.12:0,39,810	1/1:5,18:23:54.13:807,54,0	1/1:2,23:25:60.20:979,60,0	1/1:3,34:37:75.73:1225,76,0	0/0:25,0:25:72.23:0,72,1562	0/0:16,0:16:42.14:0,42,935	0/0:31,0:31:90.31:0,90,1990	0/0:24,0:24:69.24:0,69,1490	0/0:40,0:40:99:0,111,2421	1/1:3,34:37:93.32:1516,93,0	0/0:15,0:15:36.12:0,36,804
chr10	50511881	.	AGTGC	A	2647.13	PASS	AB=1.000;AC=18;AF=0.321;AN=56;BaseQRankSum=2.113;DP=664;FS=1.215;HRun=0;HaplotypeScore=132.6013;InbreedingCoeff=0.3403;MQ=61.57;MQ0=11;MQRankSum=-0.232;QD=8.12;ReadPosRankSum=-0.546;VQSLOD=2.1651;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:41,0:41:65.99:66,0,388	0/1:7,0:6:23.15:23,0,52	0/0:26,0:14:22.28:0,22,224	0/0:30,0:18:37.21:0,37,438	0/1:18,0:18:15.02:15,0,383	0/1:10,0:10:63.93:82,0,64	0/1:30,0:29:99:142,0,156	1/1:24,0:24:56.87:486,57,0	0/1:28,0:26:99:155,0,198	0/0:19,0:19:50.34:0,50,548	0/0:13,0:13:39.02:0,39,615	0/0:25,0:25:44.90:0,45,793	0/0:28,0:28:73.73:0,74,943	0/0:38,0:38:87.75:0,88,1224	0/1:32,0:32:76.78:191,0,77	0/1:23,0:23:95.94:195,0,96	0/0:29,0:29:80.70:0,81,1219	0/0:23,0:23:65.52:0,66,977	1/1:29,1:29:36.57:390,37,0	1/1:9,1:10:20.99:206,21,0	1/1:57,3:58:13.52:667,14,0	0/0:21,0:21:25.02:0,25,736	0/0:15,0:15:35.93:0,36,577	0/0:31,0:30:83.56:0,84,1403	0/0:14,0:14:37.52:0,38,576	0/0:20,0:20:56.78:0,57,673	1/1:13,0:13:26.94:218,27,0	0/0:6,0:6:18.03:0,18,361
chr10	50511883	.	TGC	T	3001.22	PASS	AB=0.964;AC=12;AF=0.214;AN=56;BaseQRankSum=0.964;DP=670;FS=5.553;HRun=0;HaplotypeScore=111.5857;InbreedingCoeff=0.7551;MQ=60.46;MQ0=11;MQRankSum=-0.561;QD=15.31;ReadPosRankSum=-0.889;VQSLOD=3.3313;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:41,0:41:37.14:37,0,243	0/0:6,0:5:8.10:0,8,62	0/0:24,0:12:22.28:0,22,224	0/0:30,0:18:37.09:0,37,356	0/0:17,0:17:35.07:0,35,356	0/0:10,0:10:8.26:0,8,82	0/0:31,0:30:38.33:0,38,243	1/1:24,0:23:61.15:534,61,0	0/0:24,0:23:42.93:0,43,276	0/0:18,0:18:20.15:0,20,378	0/0:15,0:15:40.79:0,41,447	0/0:28,0:28:31.03:0,31,559	0/0:27,0:27:43.52:0,44,615	0/0:37,0:37:73.74:0,74,932	0/0:30,0:30:30.76:0,31,165	0/0:24,0:24:28.95:0,29,168	0/0:30,0:30:35.62:0,36,826	0/0:23,0:23:9.70:0,10,666	1/1:27,3:29:72.94:636,73,0	1/1:10,0:10:23.96:197,24,0	1/1:44,20:62:99:1503,129,0	0/0:20,0:20:22.35:0,22,502	0/0:17,0:17:38.50:0,39,437	0/0:31,0:30:51.84:0,52,981	0/1:12,1:13:11.55:12,0,355	0/0:23,0:23:65.75:0,66,676	1/1:13,1:14:29.95:263,30,0	0/0:9,0:9:14.92:0,15,256
chr10	50511885	.	CGTGT	C	1809.06	PASS	AB=0.907;AC=17;AF=0.315;AN=54;BaseQRankSum=2.718;DP=709;FS=3.861;HRun=0;HaplotypeScore=143.0687;InbreedingCoeff=0.5129;MQ=57.29;MQ0=16;MQRankSum=0.849;QD=6.17;ReadPosRankSum=3.066;VQSLOD=2.7390;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:25,5:40:99:202,0,102	1/1:4,1:5:3.01:48,3,0	./.	0/0:30,0:17:9:0,9,108	0/1:15,2:17:74.94:75,0,184	1/1:4,6:10:9.03:144,9,0	1/1:16,15:33:24.07:343,24,0	0/0:28,0:25:13.78:0,14,100	1/1:13,10:22:21.07:335,21,0	0/0:18,0:21:26.27:0,26,322	0/0:14,0:15:30.08:0,30,566	0/0:28,0:29:36.32:0,36,707	0/0:28,0:30:41.79:0,42,628	0/0:38,0:40:55.62:0,56,896	1/1:11,18:31:27.08:401,27,0	1/1:10,14:24:23.78:383,24,0	0/0:25,0:31:30.07:0,30,850	0/0:23,0:27:44.32:0,44,679	0/0:32,0:30:33.29:0,33,245	0/1:11,0:11:19.16:26,0,19	0/1:73,0:71:31.70:32,0,639	0/1:21,1:23:6.04:6,0,582	0/0:17,0:17:21.07:0,21,490	0/0:30,0:31:56.60:0,57,1060	0/0:12,0:14:23.65:0,24,408	0/0:21,0:21:24.97:0,25,520	0/0:15,0:15:5.99:0,6,49	0/0:11,0:11:26.81:0,27,496
chr10	50511964	.	GCTCTCTCTCTCT	G	1316.15	PASS	AB=0.877;AC=12;AF=0.214;AN=56;BaseQRankSum=4.885;DP=535;FS=0.797;HRun=0;HaplotypeScore=197.3565;InbreedingCoeff=0.4062;MQ=61.51;MQ0=20;MQRankSum=-3.238;QD=8.72;ReadPosRankSum=1.913;VQSLOD=2.7644;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:10,3:16:3.36:98,3,0	0/0:9,0:9:6.91:0,7,228	0/0:30,0:16:2.80:0,3,13	0/0:47,0:27:12.04:0,12,269	0/0:10,0:10:24.08:0,24,1160	0/0:9,0:9:21.07:0,21,1070	0/0:25,0:26:34.50:0,34,1255	0/0:20,0:18:0:0,0,0	0/0:19,0:18:24.07:0,24,945	0/0:19,0:18:36.12:0,36,1549	0/0:10,0:9:6.02:0,6,252	0/1:16,0:17:78.70:79,0,154	0/1:16,0:19:99:111,0,210	0/0:16,0:16:21.07:0,21,950	0/0:16,0:16:20.03:0,20,701	0/0:22,0:22:25.73:0,26,968	0/0:26,0:25:57.20:0,57,2604	0/0:17,0:17:34.20:0,34,1838	1/1:13,0:13:9.03:262,9,0	0/1:8,3:14:42.94:43,0,170	1/1:34,4:40:8.59:169,9,0	0/0:9,0:10:6.02:0,6,77	0/1:12,0:12:46.58:76,0,47	0/0:21,0:21:5.25:0,5,100	0/0:21,0:21:27.08:0,27,927	0/0:17,0:16:33.11:0,33,1372	1/1:6,3:14:24.01:636,24,0	0/0:18,0:17:12.04:0,12,533
chr10	50512003	.	C	CTGTGTGTG	2140.57	PASS	AB=1.000;AC=30;AF=0.577;AN=52;BaseQRankSum=7.844;DP=634;FS=9.082;HRun=0;HaplotypeScore=195.4550;InbreedingCoeff=0.6169;MQ=41.05;MQ0=41;MQRankSum=-3.109;QD=5.82;ReadPosRankSum=-2.904;VQSLOD=1.4425;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:23,1:22:2.93:24,3,0	1/1:15,0:15:9.02:224,9,0	./.	./.	0/0:26,0:22:27.09:0,27,630	1/1:16,0:15:12:210,12,0	1/1:35,0:33:3:29,3,0	1/1:24,0:21:18.06:393,18,0	1/1:14,12:28:2.92:21,3,0	0/0:40,0:35:31.81:0,32,748	0/0:15,0:14:12.04:0,12,295	1/1:25,0:24:2.94:29,3,0	1/1:31,0:30:40.98:615,41,0	0/0:21,0:19:27.09:0,27,629	0/0:19,0:19:0:0,0,0	1/1:25,0:25:12.04:240,12,0	0/0:33,0:31:48.93:0,49,1079	0/0:29,0:29:42.13:0,42,997	1/1:18,0:16:12.58:99,13,0	0/1:19,0:18:69.26:82,0,69	1/1:37,0:32:1.41:4,1,0	1/1:16,0:16:5.83:38,6,0	1/1:12,0:11:5.51:79,6,0	1/1:29,0:28:13.77:128,14,0	0/0:34,0:32:39.10:0,39,798	0/0:31,0:27:11.09:0,11,466	0/1:13,0:13:13.46:109,0,13	0/0:14,0:10:12:0,12,257
chr10	50512039	.	G	GCA	1035.32	PASS	AB=0.873;AC=21;AF=0.375;AN=56;BaseQRankSum=2.041;DP=554;FS=0.668;HRun=0;HaplotypeScore=123.1631;InbreedingCoeff=0.5950;MQ=54.51;MQ0=27;MQRankSum=0.162;QD=4.35;ReadPosRankSum=-0.622;VQSLOD=2.8933;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:25:11.65:64,12,0	1/1:3,9:12:9.03:173,9,0	0/0:4,0:4:2.97:0,3,24	0/0:7,0:4:3.83:0,4,21	0/0:25,0:21:54.09:0,54,729	0/1:5,7:13:17.29:42,0,17	1/1:4,1:24:2.01:11,2,0	0/0:15,0:15:32.36:0,32,210	1/1:22,2:23:18.02:206,18,0	0/0:25,0:23:68.13:0,68,889	0/0:14,0:13:24.08:0,24,358	0/1:21,0:21:12.88:19,0,13	1/1:30,0:30:6.89:132,7,0	0/0:25,0:23:57.07:0,57,795	1/1:15,6:20:25.88:351,26,0	1/1:3,16:20:8.92:155,9,0	0/0:29,0:28:74.89:0,75,926	0/0:27,0:27:66.47:0,66,909	0/0:16,0:13:29.84:0,30,264	0/0:18,0:17:26.73:0,27,216	0/0:27,0:23:8.26:0,8,80	1/1:9,0:9:1.66:10,2,0	1/1:11,0:10:3.19:39,3,0	0/1:26,0:26:11.90:20,0,12	0/0:32,0:30:66.20:0,66,953	0/0:24,0:20:38.87:0,39,534	0/0:19,0:19:41.65:0,42,314	0/0:8,0:6:11.97:0,12,155
chr10	50516906	.	G	GT	1661.48	PASS	AB=0.835;AC=17;AF=0.304;AN=56;BaseQRankSum=0.638;DP=583;FS=7.530;HRun=13;HaplotypeScore=74.2483;InbreedingCoeff=0.0789;MQ=63.77;MQ0=3;MQRankSum=-0.290;QD=6.46;ReadPosRankSum=0.899;VQSLOD=2.2322;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:6,20:26:7.69:361,0,8	0/0:5,0:5:5.91:0,6,41	0/0:20,0:14:12.44:0,12,64	0/1:16,0:8:10.76:11,0,20	0/0:25,0:28:39.90:0,40,307	0/0:12,0:14:33.71:0,34,215	0/0:25,0:26:24.26:0,24,294	0/0:33,0:35:64.22:0,64,408	0/0:21,1:23:24.58:0,25,301	0/0:29,0:33:61.50:0,62,393	0/1:13,1:14:36.23:36,0,132	1/1:2,12:14:23.98:213,24,0	0/1:6,15:21:8.07:218,0,8	0/0:17,0:20:27.75:0,28,176	0/0:16,0:16:35.64:0,36,247	0/0:24,1:30:17.66:0,18,227	0/0:26,0:26:61.42:0,61,412	0/0:26,0:28:64.35:0,64,412	0/1:11,2:14:38.85:39,0,51	0/1:11,2:14:33.31:33,0,84	0/1:14,0:15:15.45:15,0,121	1/1:2,14:18:10.81:301,11,0	1/1:9,6:14:3.42:168,3,0	0/1:6,25:33:20.38:407,0,20	0/0:19,0:19:31.38:0,31,207	0/1:27,0:27:1.46:1,0,272	0/1:16,2:20:12.93:13,0,195	0/1:7,1:8:11.22:11,0,69
chr10	50517258	.	G	GA	10659.61	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-5.579;DP=653;FS=1.413;HRun=6;HaplotypeScore=78.2357;InbreedingCoeff=0.9973;MQ=73.51;MQ0=1;MQRankSum=-1.569;QD=26.65;ReadPosRankSum=1.015;VQSLOD=5.1777;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,40:42:99:1416,114,0	1/1:1,19:20:51.16:642,51,0	0/0:26,0:23:37.42:0,37,283	0/0:16,0:11:14.77:0,15,160	0/0:28,0:28:78.08:0,78,768	1/1:1,23:24:60.19:755,60,0	1/1:3,22:25:60.19:754,60,0	1/1:2,0:24:63.37:329,63,0	1/1:2,25:27:78.25:979,78,0	0/0:33,0:33:81.18:0,81,823	0/0:22,0:22:63.08:0,63,620	1/1:1,21:22:57.18:716,57,0	1/1:1,17:18:54.17:678,54,0	0/0:17,0:17:42.09:0,42,428	1/1:2,28:30:72.23:906,72,0	1/1:1,20:21:48.15:603,48,0	0/0:28,0:28:78.17:0,78,795	0/0:23,0:23:60.09:0,60,600	1/1:1,1:27:71.99:395,72,0	1/1:1,0:29:79.41:403,79,0	1/1:0,2:17:36.93:188,37,0	1/1:0,17:17:45.14:566,45,0	1/1:0,17:17:36.11:453,36,0	1/1:1,25:26:57.18:717,57,0	0/0:20,0:20:48.10:0,48,489	0/0:30,0:30:84.19:0,84,856	1/1:0,2:14:31.28:160,31,0	0/0:10,0:10:27.05:0,27,268
chr10	50518698	.	CAG	C	1300.89	PASS	AB=1.000;AC=12;AF=0.214;AN=56;BaseQRankSum=10.369;DP=777;FS=4.922;HRun=0;HaplotypeScore=177.0660;InbreedingCoeff=0.5592;MQ=52.03;MQ0=19;MQRankSum=-8.197;QD=7.61;ReadPosRankSum=-0.312;VQSLOD=3.2979;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:37:12.17:0,12,101	0/1:9,0:9:0.03:0,0,0	0/0:72,0:17:2.49:0,2,67	0/0:105,0:25:14.23:0,14,239	0/0:25,0:25:66.21:0,66,1037	0/0:20,0:20:9.91:0,10,81	0/0:30,0:27:8.86:0,9,69	1/1:16,13:27:45.12:505,45,0	0/1:17,0:16:8.04:8,0,54	0/0:34,1:35:59.38:0,59,1458	0/1:12,0:12:12.58:13,0,310	0/0:24,0:23:14.96:0,15,139	0/0:22,0:22:12.90:0,13,81	0/0:19,1:20:11.23:0,11,626	0/0:31,0:27:16.37:0,16,122	0/1:26,0:25:4.24:4,0,36	0/0:29,0:29:67.47:0,67,1072	0/0:20,0:20:48.11:0,48,748	1/1:9,10:18:41.26:374,41,0	1/1:14,12:25:14.76:137,15,0	0/0:8,7:15:0.41:0,0,1	0/0:24,0:22:9.27:0,9,65	0/0:22,0:21:0.88:0,1,2	0/0:8,0:8:0.94:0,1,2	0/0:25,0:25:48.16:0,48,780	0/0:23,0:23:54.17:0,54,837	1/1:13,20:33:57.11:418,57,0	0/0:17,0:17:32.99:0,33,519
chr10	50518704	.	G	GAC	712.88	PASS	AB=0.892;AC=6;AF=0.107;AN=56;BaseQRankSum=7.886;DP=788;FS=1.784;HRun=0;HaplotypeScore=185.3084;InbreedingCoeff=0.1795;MQ=51.94;MQ0=20;MQRankSum=-6.049;QD=4.95;ReadPosRankSum=1.530;VQSLOD=3.2556;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:37:48.01:0,48,391	0/0:8,0:8:6:0,6,60	0/0:67,0:15:26.13:0,26,205	0/0:112,0:28:31.08:0,31,359	0/0:26,0:26:72.19:0,72,1033	0/0:18,0:18:36.28:0,36,279	0/0:31,0:28:43.20:0,43,337	0/1:34,0:31:71.42:244,0,71	0/0:17,0:16:21.20:0,21,142	0/0:36,0:36:99:0,108,1547	0/0:12,0:12:33.02:0,33,415	0/0:24,0:23:45.25:0,45,345	0/0:18,0:18:21.59:0,22,179	0/0:19,0:19:54.08:0,54,712	0/0:31,0:27:38.87:0,39,313	0/0:28,0:27:28.80:0,29,339	0/0:31,0:31:87.08:0,87,1162	0/0:18,0:18:51.10:0,51,729	0/1:30,3:30:55.64:201,0,56	1/1:20,6:25:7.71:67,8,0	0/1:15,2:17:17.55:19,0,18	0/0:26,0:24:38.87:0,39,323	0/0:17,0:16:21.84:0,22,172	0/0:7,0:7:3.46:0,3,24	0/0:20,0:20:57.15:0,57,808	0/0:21,0:21:60.17:0,60,842	0/1:23,11:34:32.96:305,0,33	0/0:17,0:17:38.66:0,39,586
chr10	50518726	.	C	CAG	2586.87	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=2.817;DP=757;FS=10.864;HRun=0;HaplotypeScore=177.7345;InbreedingCoeff=0.8846;MQ=56.55;MQ0=15;MQRankSum=-4.024;QD=15.40;ReadPosRankSum=-1.014;VQSLOD=2.9468;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:30:32.65:0,33,353	0/0:9,0:9:5.85:0,6,51	0/0:61,0:21:28.04:0,28,381	0/0:100,0:37:40.56:0,41,467	0/0:28,0:28:75.20:0,75,890	0/0:20,0:20:26.94:0,27,321	0/0:30,0:27:33.07:0,33,395	1/1:18,21:37:62.58:979,63,0	0/0:19,0:18:24.01:0,24,250	0/0:25,0:25:42.11:0,42,490	0/0:15,0:15:30.08:0,30,360	0/0:18,0:17:27:0,27,286	0/0:16,0:16:16.14:0,16,211	0/0:18,0:18:42.13:0,42,521	0/0:30,0:26:41.92:0,42,486	0/0:22,0:21:28.04:0,28,348	0/0:28,0:28:81.20:0,81,974	0/0:21,0:22:41.96:0,42,497	1/1:21,15:35:51.62:757,52,0	1/1:15,16:30:17.57:282,18,0	1/1:12,8:20:6.49:100,6,0	0/0:24,0:23:27.07:0,27,318	0/0:9,0:8:6.01:0,6,64	0/0:6,0:6:2.89:0,3,21	0/0:15,0:15:21.07:0,21,260	0/0:22,0:22:42.11:0,42,496	1/1:16,23:40:55.24:637,55,0	0/0:19,0:20:43.54:0,44,574
chr10	50521644	.	C	CTG	386.04	PASS	AB=0.994;AC=15;AF=0.375;AN=40;BaseQRankSum=-2.260;DP=576;FS=0.000;HRun=0;HaplotypeScore=99.8596;InbreedingCoeff=-0.0935;MQ=62.53;MQ0=6;MQRankSum=0.639;QD=1.56;ReadPosRankSum=-0.047;VQSLOD=1.0878;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:2.84:0,3,14	0/1:7,0:7:0:0,0,0	./.	./.	0/1:25,0:24:25.07:25,0,33	0/1:17,1:16:9.09:47,0,9	0/1:22,0:22:2.11:87,0,2	1/1:22,0:21:0.47:1,0,0	0/1:17,0:17:12.27:12,0,15	0/0:20,0:23:2.84:0,3,14	0/0:9,0:10:5.68:0,6,28	./.	0/0:16,0:16:5.65:0,6,28	0/1:19,0:19:5.86:6,0,18	0/1:24,0:24:21.29:21,0,66	0/1:23,0:23:43.86:56,0,44	1/1:19,12:33:9.03:131,9,0	0/1:21,0:21:13.16:111,0,13	./.	0/0:18,0:18:2.84:0,3,14	./.	./.	0/0:15,0:15:2.80:0,3,13	./.	0/0:23,1:25:8.51:0,9,72	1/1:16,0:16:0.94:2,1,0	0/0:12,0:12:2.84:0,3,14	./.
chr10	50521686	.	GTGTGTGTGTGTA	G	3211.82	PASS	AB=1.000;AC=22;AF=0.393;AN=56;BaseQRankSum=8.178;DP=542;FS=2.309;HRun=0;HaplotypeScore=185.3566;InbreedingCoeff=0.2193;MQ=53.23;MQ0=13;MQRankSum=2.356;QD=10.07;ReadPosRankSum=-2.436;VQSLOD=1.9440;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:37,1:37:12.60:500,13,0	0/1:10,0:10:36.46:36,0,404	0/0:22,0:6:18.02:0,18,172	0/0:14,0:10:13.21:0,13,204	0/0:16,0:15:39.06:0,39,1140	0/1:22,0:21:99:145,0,596	0/1:31,0:31:99:183,0,1011	0/1:21,0:20:43.56:266,0,44	0/1:14,0:14:71.51:72,0,367	0/0:16,0:16:42.04:0,42,671	0/0:7,0:7:6.02:0,6,177	1/1:16,0:16:23.92:213,24,0	1/1:2,12:14:6.02:224,6,0	0/0:21,0:21:48.22:0,48,1479	0/0:26,0:26:23.10:0,23,1813	0/1:31,0:31:99:169,0,1526	0/0:29,0:28:42.58:0,43,1560	0/0:22,0:21:40.37:0,40,1714	0/1:9,0:8:46.33:111,0,46	0/1:16,0:16:7.85:8,0,19	0/1:31,0:31:99:197,0,217	1/1:17,0:16:38.74:325,39,0	1/1:9,1:10:20.02:262,20,0	1/1:30,0:30:55.15:581,55,0	0/0:21,0:20:44.65:0,45,1350	0/0:23,0:19:52.79:0,53,1059	0/1:9,0:9:42:112,0,42	0/0:5,0:5:14.99:0,15,168
chr10	50521690	.	GTGTGTGTA	G	3889.94	PASS	AB=1.000;AC=28;AF=0.500;AN=56;BaseQRankSum=8.734;DP=520;FS=2.302;HRun=0;HaplotypeScore=148.6080;InbreedingCoeff=0.5418;MQ=53.79;MQ0=13;MQRankSum=1.717;QD=12.01;ReadPosRankSum=-0.480;VQSLOD=2.8920;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:34,0:33:64.50:531,65,0	0/1:10,0:10:39.77:40,0,168	0/0:25,0:9:20.21:0,20,233	0/0:16,0:11:16.18:0,16,239	0/0:14,0:13:33.02:0,33,587	0/1:21,0:20:99:172,0,261	0/1:30,0:30:99:237,0,409	1/1:24,0:23:49.05:426,49,0	0/1:12,0:12:97.29:97,0,178	0/0:17,0:17:39.02:0,39,416	0/0:5,0:5:6.02:0,6,73	1/1:11,0:11:20.91:162,21,0	1/1:12,0:12:6.02:131,6,0	0/0:21,0:21:45.38:0,45,933	0/1:25,0:25:0.77:1,0,1035	0/1:28,0:28:99:197,0,748	0/0:28,0:27:39.09:0,39,979	0/0:22,0:21:43.02:0,43,1118	1/1:10,0:9:23.87:183,24,0	1/1:3,12:15:3.01:84,3,0	1/1:31,0:31:45.46:344,45,0	1/1:17,0:16:38.86:307,39,0	1/1:8,0:8:20.97:210,21,0	1/1:28,0:28:69.24:557,69,0	0/0:21,0:20:47.57:0,48,830	0/0:22,0:18:52.62:0,53,585	1/1:8,0:8:17.98:210,18,0	0/0:5,0:5:11.78:0,12,86
chr10	50526265	.	A	AC	6789.70	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-12.265;DP=839;FS=4.960;HRun=0;HaplotypeScore=79.9227;InbreedingCoeff=1.0000;MQ=84.67;MQ0=0;MQRankSum=-1.508;QD=42.17;ReadPosRankSum=-0.796;VQSLOD=5.0472;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,150,2084	0/0:12,0:12:36.12:0,36,503	0/0:21,0:21:48.70:0,49,670	0/0:30,0:30:55.46:0,55,1062	0/0:23,0:23:63.21:0,63,876	0/0:28,0:28:84.23:0,84,1107	0/0:21,0:21:63.19:0,63,858	1/1:2,35:37:99:1553,105,0	0/0:20,0:20:60.16:0,60,801	0/0:24,0:24:72.23:0,72,978	0/0:30,0:30:90.29:0,90,1240	0/0:38,0:38:99:0,114,1541	0/0:50,0:50:99:0,150,2044	0/0:40,0:40:99:0,111,1513	0/0:42,0:41:99:0,126,1722	0/0:34,0:34:99:0,102,1418	0/0:37,0:37:99:0,111,1495	0/0:26,0:26:78.14:0,78,1001	1/1:0,32:32:93.30:1421,93,0	1/1:0,20:20:54.10:814,54,0	1/1:1,46:47:99:2017,129,0	0/0:27,0:27:81.26:0,81,1111	0/0:20,0:20:60.20:0,60,836	0/0:33,0:33:96.22:0,96,1257	0/0:24,0:24:72.23:0,72,974	0/0:27,0:27:81.26:0,81,1115	1/1:1,24:25:63.21:984,63,0	0/0:21,0:21:63.19:0,63,861
chr10	50527258	.	T	TA	1354.62	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=4.666;DP=707;FS=9.146;HRun=4;HaplotypeScore=82.3003;InbreedingCoeff=0.9917;MQ=83.58;MQ0=0;MQRankSum=-1.098;QD=31.50;ReadPosRankSum=2.042;VQSLOD=3.9346;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,141,1584	1/1:1,11:12:33.11:451,33,0	0/0:22,0:22:57.15:0,57,637	0/0:19,0:19:48.13:0,48,536	0/0:26,0:26:69.12:0,69,740	0/0:20,0:20:57.15:0,57,636	0/0:28,0:28:78.21:0,78,874	0/0:28,0:28:78.21:0,78,877	0/0:20,0:20:57.13:0,57,627	0/0:20,0:20:60.15:0,60,659	0/0:19,0:19:54.11:0,54,589	0/0:22,0:22:63.15:0,63,696	0/0:31,0:31:90.19:0,90,978	0/0:26,0:26:75.21:0,75,850	1/1:3,28:31:75.25:1026,75,0	0/0:20,0:20:57.15:0,57,637	0/0:34,0:34:90.24:0,90,1011	0/0:15,0:15:39.10:0,39,433	0/0:23,0:23:63.15:0,63,698	0/0:30,0:30:84.24:0,84,952	0/0:26,0:26:75.20:0,75,843	0/0:29,0:29:87.24:0,87,978	0/0:23,0:23:66.10:0,66,723	0/0:27,0:27:81.22:0,81,908	0/0:30,0:30:84.24:0,84,953	0/0:31,0:31:90.26:0,90,1021	0/0:36,0:36:99:0,105,1181	0/0:5,0:5:15.04:0,15,170
chr10	50529046	.	G	GAA	8272.24	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=9.983;DP=686;FS=9.050;HRun=10;HaplotypeScore=115.9314;InbreedingCoeff=0.9893;MQ=69.69;MQ0=3;MQRankSum=1.259;QD=21.00;ReadPosRankSum=-1.249;VQSLOD=2.9971;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,17:19:42.14:626,42,0	1/1:0,12:14:38.61:529,39,0	0/0:24,0:15:17.93:0,18,174	0/0:13,0:10:9.94:0,10,117	0/0:40,0:41:87.55:0,88,1014	1/1:1,0:26:49.91:175,50,0	1/1:5,1:24:15.43:155,15,0	1/1:8,1:15:30.50:299,31,0	1/1:5,0:21:34.93:123,35,0	0/0:25,0:26:53.70:0,54,512	0/0:28,0:29:65.81:0,66,640	1/1:4,19:26:60.19:861,60,0	1/1:4,11:17:42.09:583,42,0	0/0:29,0:29:57.09:0,57,729	1/1:1,23:25:42.14:610,42,0	1/1:4,0:31:60.40:246,60,0	0/0:32,0:33:77.79:0,78,756	0/0:46,0:46:99:0,114,1129	1/1:11,0:16:23.97:219,24,0	1/1:6,3:39:99:933,102,0	1/1:2,1:12:30.01:304,30,0	1/1:3,23:27:62.85:708,63,0	1/1:3,19:22:39.09:556,39,0	1/1:5,16:23:45.15:654,45,0	0/0:14,0:15:35.77:0,36,347	0/0:22,0:22:54.09:0,54,549	1/1:5,1:34:74.57:691,75,0	0/0:14,0:14:35.79:0,36,346
chr10	50529727	.	AGT	A	1665.48	PASS	AB=0.520;AC=3;AF=0.054;AN=56;BaseQRankSum=7.205;DP=694;FS=6.101;HRun=0;HaplotypeScore=83.0533;InbreedingCoeff=0.6503;MQ=79.45;MQ0=0;MQRankSum=-3.070;QD=40.62;ReadPosRankSum=3.156;VQSLOD=5.2645;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,135,2716	0/1:1,12:13:21.81:548,0,22	0/0:26,0:26:75.26:0,75,1491	0/0:24,0:24:66.55:0,67,1191	0/0:24,0:24:72.23:0,72,1424	0/0:22,0:22:66.21:0,66,1288	0/0:18,0:18:54.19:0,54,1097	0/0:46,0:46:99:0,135,2652	0/0:19,0:19:57.20:0,57,1145	0/0:15,0:15:45.13:0,45,809	0/0:25,0:25:75.26:0,75,1509	0/0:22,0:22:66.21:0,66,1303	0/0:28,0:28:84.29:0,84,1706	0/0:27,0:27:81.26:0,81,1590	1/1:0,28:28:75.26:1224,75,0	0/0:26,0:26:78.25:0,78,1520	0/0:25,0:25:75.24:0,75,1470	0/0:16,0:16:45.14:0,45,877	0/0:22,0:22:66.22:0,66,1274	0/0:26,0:26:78.25:0,78,1522	0/0:36,0:36:99:0,108,2193	0/0:20,0:20:60.21:0,60,1218	0/0:23,0:23:69.24:0,69,1382	0/0:20,0:20:57.20:0,57,1157	0/0:30,0:30:90.31:0,90,1828	0/0:37,0:37:99:0,111,2213	0/0:22,0:22:66.21:0,66,1289	0/0:9,0:9:27.09:0,27,535
chr10	50530420	.	AGTGT	A	731.69	PASS	AB=0.930;AC=21;AF=0.420;AN=50;BaseQRankSum=3.796;DP=659;FS=0.915;HRun=0;HaplotypeScore=115.9783;InbreedingCoeff=0.1746;MQ=72.74;MQ0=23;MQRankSum=2.369;QD=2.11;ReadPosRankSum=1.145;VQSLOD=2.2041;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:31,9:40:1.23:104,1,0	1/1:7,0:7:2.04:6,2,0	./.	./.	0/0:10,0:10:1.66:0,2,10	0/1:13,0:13:2.42:8,0,2	0/0:22,0:25:8.94:0,9,68	0/0:25,0:23:1.82:0,2,5	0/0:35,0:31:20.17:0,20,276	0/0:20,0:20:15.32:0,15,227	0/0:10,0:10:8.08:0,8,173	0/1:15,6:20:34.35:34,0,40	1/1:16,0:16:4.82:51,5,0	0/1:24,0:25:39.03:39,0,69	0/1:39,0:39:6.60:245,0,7	0/1:24,1:29:33.19:33,0,70	0/1:24,0:24:19.10:19,0,249	0/0:25,0:24:28.37:0,28,340	0/0:22,0:21:3.01:0,3,33	./.	0/1:45,0:44:5.37:5,0,97	1/1:17,4:20:6.01:70,6,0	1/1:21,5:26:2.43:45,2,0	1/1:22,1:22:3.92:194,4,0	0/0:10,0:10:12.88:0,13,152	0/0:30,0:31:28.09:0,28,229	1/1:15,0:15:3:25,3,0	0/0:7,0:7:3.83:0,4,20
chr10	50530692	.	G	GGCTA	2887.13	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-7.146;DP=775;FS=1.379;HRun=0;HaplotypeScore=120.6226;InbreedingCoeff=0.9938;MQ=88.33;MQ0=0;MQRankSum=-2.598;QD=65.62;ReadPosRankSum=-0.092;VQSLOD=5.7118;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,132,2670	1/1:2,5:7:21.07:579,21,0	0/0:20,0:20:54.14:0,54,1076	0/0:35,0:35:99:0,99,1870	0/0:21,0:21:63.22:0,63,1321	0/0:25,0:25:72.25:0,72,1510	0/0:32,0:32:93.32:0,93,1903	0/0:34,0:34:99:0,99,2040	0/0:28,0:28:81.28:0,81,1696	0/0:26,0:26:78.26:0,78,1513	0/0:15,0:15:45.15:0,45,944	0/0:33,0:33:90.31:0,90,1869	0/0:39,0:39:99:0,111,2321	0/0:30,0:30:87.30:0,87,1793	1/1:2,33:37:84.29:2429,84,0	0/0:32,0:32:96.31:0,96,1959	0/0:42,0:42:99:0,126,2607	0/0:24,0:24:69.21:0,69,1353	0/0:25,0:25:72.22:0,72,1420	0/0:16,0:16:48.16:0,48,1006	0/0:44,0:44:99:0,132,2687	0/0:27,0:27:81.25:0,81,1622	0/0:22,0:22:63.16:0,63,1203	0/0:43,0:43:99:0,126,2635	0/0:16,0:16:48.16:0,48,1006	0/0:29,0:29:87.30:0,87,1825	0/0:21,0:20:63.20:0,63,1278	0/0:6,0:6:18.06:0,18,377
chr10	50530996	.	T	TAAA	6096.23	PASS	AB=0.527;AC=32;AF=0.571;AN=56;BaseQRankSum=13.811;DP=640;FS=4.273;HRun=9;HaplotypeScore=113.7459;InbreedingCoeff=0.8657;MQ=64.73;MQ0=4;MQRankSum=-0.517;QD=15.88;ReadPosRankSum=0.899;VQSLOD=2.3416;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,0:25:59.79:464,60,0	1/1:6,13:20:46.40:835,46,0	0/0:21,0:11:17.20:0,17,242	0/0:16,0:8:6.29:0,6,100	0/0:35,0:35:59.88:0,60,996	1/1:3,0:27:65.77:517,66,0	1/1:4,0:19:37.12:280,37,0	1/1:8,0:23:17.93:54,18,0	1/1:0,0:25:62.78:487,63,0	0/0:33,0:33:93.27:0,93,1153	0/0:19,0:19:42.08:0,42,517	1/1:3,0:24:44.83:345,45,0	1/1:1,0:16:32.87:252,33,0	0/0:18,0:18:45.13:0,45,568	1/1:4,20:25:63.20:1206,63,0	1/1:2,1:20:49.09:407,49,0	0/0:15,0:15:39.12:0,39,493	0/0:28,0:28:72.15:0,72,889	1/1:5,0:23:23.31:51,23,0	1/1:7,0:28:15.78:56,16,0	0/1:1,0:14:14.11:14,0,14	1/1:5,0:27:66.62:484,67,0	1/1:4,0:28:61.33:463,61,0	1/1:1,0:8:17.93:138,18,0	0/0:26,0:26:75.21:0,75,935	0/0:34,0:34:84.17:0,84,1019	0/1:4,0:30:2.16:43,0,2	0/0:11,0:11:21.06:0,21,265
chr10	50533262	.	CCAAA	C	1038.57	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.167;DP=812;FS=3.534;HRun=0;HaplotypeScore=127.1874;InbreedingCoeff=0.8418;MQ=71.56;MQ0=1;MQRankSum=3.302;QD=22.10;ReadPosRankSum=0.124;VQSLOD=3.0504;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:68.39:0,68,1632	1/1:3,12:15:27.09:435,27,0	0/0:40,0:30:15.05:0,15,336	0/0:29,0:24:18.03:0,18,365	0/0:33,0:33:66.67:0,67,1529	0/0:26,1:27:2.88:0,3,1078	0/0:26,0:26:48.16:0,48,1132	0/0:39,0:39:54.16:0,54,1145	0/0:31,0:31:48.16:0,48,1155	0/0:35,1:36:17.92:0,18,1403	0/0:24,1:25:11.85:0,12,1137	0/0:30,0:30:63.20:0,63,1423	0/0:42,0:42:90.31:0,90,2118	0/0:31,0:31:57.20:0,57,1318	1/1:9,23:32:45.15:725,45,0	0/0:26,0:26:63.22:0,63,1493	0/0:34,0:34:78.27:0,78,1732	0/0:25,0:24:60.21:0,60,1401	0/0:19,0:19:42.08:0,42,850	0/0:23,1:24:5.86:0,6,1091	0/0:30,0:30:54.19:0,54,1274	0/0:30,1:31:23.94:0,24,1548	0/0:15,0:15:27.09:0,27,648	0/0:35,0:35:72.25:0,72,1705	0/0:26,0:26:42.14:0,42,990	0/0:27,0:27:57.20:0,57,1368	0/0:33,0:33:78.27:0,78,1862	0/0:13,0:13:36.11:0,36,804
chr10	50535573	.	GGTGTGT	G	2633.81	PASS	AB=1.000;AC=31;AF=0.646;AN=48;BaseQRankSum=2.410;DP=554;FS=2.896;HRun=0;HaplotypeScore=121.8667;InbreedingCoeff=0.7096;MQ=56.35;MQ0=20;MQRankSum=1.200;QD=8.58;ReadPosRankSum=3.346;VQSLOD=2.2515;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:12,0:14:9.03:167,9,0	1/1:2,0:3:3.01:53,3,0	./.	./.	0/0:25,0:25:23.27:0,23,577	0/1:21,0:20:12.02:104,0,12	1/1:14,0:12:9.50:174,10,0	1/1:32,0:31:6.02:80,6,0	1/1:19,0:19:38.10:468,38,0	0/0:27,0:27:31.61:0,32,924	0/0:19,0:19:13.08:0,13,492	1/1:11,0:13:9.99:195,10,0	1/1:17,0:17:24.07:407,24,0	0/0:15,0:15:15.04:0,15,344	./.	1/1:19,0:19:26.54:193,27,0	0/0:17,0:15:8.96:0,9,134	0/0:13,0:13:18.04:0,18,411	1/1:17,0:18:5.53:116,6,0	1/1:27,1:28:1.24:3,1,0	1/1:18,0:15:3.01:60,3,0	1/1:17,0:19:12:202,12,0	1/1:14,0:16:15.05:250,15,0	1/1:19,0:20:6.02:121,6,0	./.	0/0:25,0:24:33.57:0,34,805	1/1:18,15:33:11.35:217,11,0	0/0:13,0:10:9.03:0,9,229
chr10	50535605	.	TGTGTGTGTGTGA	T	519.61	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=5.332;DP=582;FS=18.181;HRun=0;HaplotypeScore=145.3878;InbreedingCoeff=0.1780;MQ=40.56;MQ0=60;MQRankSum=3.209;QD=2.33;ReadPosRankSum=2.236;VQSLOD=1.7645;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:12:8.90:104,9,0	1/1:9,0:8:6:84,6,0	0/0:11,0:5:11.99:0,12,130	0/0:7,0:1:2.98:0,3,21	0/0:23,0:22:45.14:0,45,1336	0/1:20,0:18:16.60:17,0,262	0/1:19,0:13:48.42:48,0,54	0/0:25,0:22:39.38:0,39,305	0/0:29,0:27:30.65:0,31,374	0/0:34,0:33:82.87:0,83,2746	0/0:17,0:16:33.06:0,33,1025	1/1:22,0:21:7.76:95,8,0	0/1:23,0:19:58.21:116,0,58	0/0:25,0:24:10.22:0,10,730	0/0:14,13:25:3.56:0,4,13	0/0:29,0:24:19.08:0,19,255	0/0:17,0:14:6.12:0,6,427	0/0:13,0:11:27.03:0,27,819	0/1:14,0:11:10.19:10,0,132	1/1:31,0:28:3.01:46,3,0	0/0:27,0:14:2.37:0,2,8	0/1:25,0:23:37.69:38,0,65	0/1:20,0:19:9.85:78,0,10	0/1:26,0:19:43.35:43,0,80	0/0:16,0:16:3.01:0,3,45	0/0:24,0:21:59.80:0,60,1811	0/0:28,0:25:6.92:0,7,193	0/0:7,0:3:9.03:0,9,443
chr10	50535609	.	TGTGTGTGAGAGAGA	T	2420.11	PASS	AB=1.000;AC=27;AF=0.540;AN=50;BaseQRankSum=1.589;DP=554;FS=14.980;HRun=0;HaplotypeScore=138.3318;InbreedingCoeff=0.6409;MQ=39.79;MQ0=61;MQRankSum=1.756;QD=7.83;ReadPosRankSum=0.045;VQSLOD=1.7301;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:13:9.01:142,9,0	0/1:9,0:8:9.08:50,0,9	./.	./.	0/0:24,0:23:38.99:0,39,892	0/1:21,0:19:34.67:56,0,35	1/1:18,0:11:9.29:174,9,0	1/1:24,0:21:16.93:253,17,0	1/1:28,0:26:12.47:235,12,0	0/0:34,0:33:94.24:0,94,1973	0/0:16,0:15:22.11:0,22,931	1/1:22,0:21:12.87:182,13,0	0/1:20,0:16:7.33:322,0,7	0/0:25,0:24:32.68:0,33,902	0/0:28,0:26:3.41:0,3,20	1/1:29,0:24:26.78:209,27,0	0/0:17,0:14:25.91:0,26,440	0/0:13,0:11:25.64:0,26,706	1/1:9,0:7:11.93:136,12,0	./.	1/1:27,0:13:3.01:65,3,0	1/1:23,0:21:12:203,12,0	1/1:19,0:18:15.05:235,15,0	1/1:24,0:17:6.02:108,6,0	0/0:7,0:17:6.02:0,6,222	0/0:22,0:19:57.11:0,57,1540	1/1:21,0:18:11.06:239,11,0	0/0:7,0:3:9.03:0,9,343
chr10	50535615	.	TGAGAGA	T	91.30	PASS	AB=0.938;AC=7;AF=0.140;AN=50;BaseQRankSum=3.197;DP=540;FS=2.583;HRun=0;HaplotypeScore=113.6126;InbreedingCoeff=0.2190;MQ=39.07;MQ0=60;MQRankSum=0.064;QD=0.68;ReadPosRankSum=1.468;VQSLOD=2.3280;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:13,2:13:2.92:0,3,17	0/0:9,0:8:2.06:0,2,12	./.	./.	0/0:21,0:20:18.01:0,18,257	0/0:21,0:17:8.74:0,9,38	0/1:19,0:10:0:0,0,0	0/0:23,0:21:3.61:0,4,20	0/1:29,0:27:2.90:3,0,52	0/0:30,0:29:38.63:0,39,596	0/0:18,0:17:27.06:0,27,460	1/1:14,8:21:4.86:46,5,0	0/1:16,3:14:4.73:68,0,5	0/0:24,0:23:21.07:0,21,411	0/0:29,0:26:3.01:0,3,35	0/1:26,1:22:5.79:67,0,6	0/0:18,0:15:20.77:0,21,305	0/0:13,0:11:18.02:0,18,327	0/0:9,0:7:3.10:0,3,13	./.	0/0:26,0:13:2.68:0,3,11	0/0:19,2:19:2.96:0,3,19	0/1:16,3:17:4.84:14,0,5	0/0:26,0:19:1.25:0,1,3	0/0:21,0:20:12.04:0,12,268	0/0:24,0:21:54.50:0,54,887	0/0:20,0:17:4.05:0,4,12	0/0:7,0:3:9:0,9,132
chr10	50535654	.	C	CAGAG	86.49	PASS	AB=0.978;AC=11;AF=0.239;AN=46;BaseQRankSum=4.563;DP=494;FS=10.742;HRun=0;HaplotypeScore=107.6317;InbreedingCoeff=0.4813;MQ=41.26;MQ0=70;MQRankSum=-3.527;QD=0.54;ReadPosRankSum=-2.902;VQSLOD=0.6817;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:13,1:12:0:1,0,0	1/1:12,0:12:0.77:2,1,0	./.	0/0:13,0:5:7.41:0,7,69	0/0:18,0:17:33.08:0,33,533	0/0:22,0:16:5.36:0,5,66	0/1:19,0:11:11.89:12,0,20	./.	0/0:23,0:22:3.37:0,3,9	0/0:30,0:26:60.20:0,60,1012	0/0:18,0:17:32.97:0,33,483	1/1:21,2:23:6.21:79,6,0	1/1:26,1:22:5.35:27,5,0	0/0:26,0:24:35.97:0,36,537	0/1:32,0:30:0.25:17,0,0	1/1:29,0:24:4.15:69,4,0	0/0:18,0:15:32.25:0,32,491	0/0:14,0:11:12.09:0,12,386	./.	./.	0/0:15,0:2:2.88:0,3,15	0/0:21,1:20:3.48:0,3,39	0/0:17,1:16:0.47:0,0,2	0/0:28,1:22:0.47:0,0,1	0/0:25,0:23:33.08:0,33,524	0/0:20,0:19:47.99:0,48,816	./.	0/0:7,0:5:12.04:0,12,205
chr10	50535656	.	GAGAGAC	G	387	PASS	AB=1.000;AC=7;AF=0.152;AN=46;BaseQRankSum=5.056;DP=497;FS=0.000;HRun=0;HaplotypeScore=110.9653;InbreedingCoeff=0.4611;MQ=41.49;MQ0=70;MQRankSum=2.857;QD=3.15;ReadPosRankSum=-1.119;VQSLOD=1.6336;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:12:3.01:0,3,40	1/1:13,2:12:10.85:85,11,0	./.	0/0:16,0:5:5.15:0,5,73	0/0:18,0:17:33.11:0,33,861	0/0:24,0:18:14.91:0,15,183	0/0:18,0:10:6.02:0,6,77	./.	0/0:21,0:20:8.85:0,9,64	0/0:31,0:27:66.22:0,66,1303	0/0:18,0:17:33.11:0,33,781	0/0:23,0:23:1.78:0,2,12	0/0:27,0:22:1.79:0,2,24	0/0:27,0:25:42.14:0,42,937	1/1:26,8:32:38.20:406,38,0	0/1:29,0:24:8.50:9,0,11	0/0:19,0:16:18.48:0,18,711	0/0:14,0:11:26.11:0,26,659	./.	./.	0/0:15,0:2:2.96:0,3,19	0/0:22,0:20:2.21:0,2,34	0/1:17,0:15:0:1,0,0	0/1:28,0:21:0:0,0,0	0/0:24,0:22:33.11:0,33,773	0/0:21,0:20:53.77:0,54,1289	./.	0/0:7,0:5:12.04:0,12,260
chr10	50535670	.	CAG	C	180.46	PASS	AB=0.956;AC=15;AF=0.313;AN=48;BaseQRankSum=5.509;DP=497;FS=5.222;HRun=0;HaplotypeScore=87.7829;InbreedingCoeff=0.4651;MQ=46.77;MQ0=55;MQRankSum=0.059;QD=0.90;ReadPosRankSum=-0.915;VQSLOD=0.7207;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:14:2.94:18,3,0	0/1:11,2:10:3.24:18,0,3	0/0:5,0:1:2.88:0,3,15	0/0:19,0:5:9.03:0,9,133	0/0:19,0:18:42.14:0,42,697	1/1:25,0:19:13.82:88,14,0	0/1:14,0:8:11.87:18,0,12	./.	1/1:18,0:18:8.95:67,9,0	0/0:31,0:28:72.17:0,72,1080	0/0:19,0:18:39.13:0,39,655	0/1:23,0:23:5.92:16,0,6	1/1:24,0:20:0.75:2,1,0	0/0:26,0:24:42.09:0,42,800	1/1:26,7:32:1.14:72,1,0	1/1:33,0:29:1.36:19,1,0	0/0:22,0:19:39.05:0,39,613	0/0:14,0:10:24.04:0,24,361	./.	./.	0/0:7,0:2:3.01:0,3,51	0/0:22,0:20:0.94:0,1,2	0/0:16,0:16:0.47:0,0,1	0/0:30,0:24:0:0,0,0	0/0:23,0:22:45.14:0,45,712	0/0:23,0:22:57.16:0,57,927	./.	0/0:8,0:6:15.05:0,15,255
chr10	50535674	.	GAGAGAGACAC	G	1002.33	PASS	AB=0.585;AC=19;AF=0.396;AN=48;BaseQRankSum=3.558;DP=501;FS=2.285;HRun=0;HaplotypeScore=123.8008;InbreedingCoeff=0.6492;MQ=47.87;MQ0=53;MQRankSum=-1.581;QD=4.56;ReadPosRankSum=0.925;VQSLOD=2.5533;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:15:3.01:91,3,0	0/0:12,0:9:12.51:0,13,253	0/0:7,0:2:4.83:0,5,69	0/0:23,0:5:8.78:0,9,100	0/0:22,0:21:51.15:0,51,1675	1/1:22,3:19:17.77:537,18,0	1/1:14,0:8:2.98:42,3,0	./.	1/1:7,10:17:9.03:263,9,0	0/0:30,0:27:71.53:0,72,2311	0/0:18,0:17:42.14:0,42,1298	1/1:13,10:23:2.74:89,3,0	0/1:7,17:21:0.12:29,0,0	0/0:27,0:25:56.67:0,57,1621	0/0:35,0:34:56.88:0,57,1073	1/1:11,23:29:2.53:92,3,0	0/0:21,0:19:27.75:0,28,1472	0/0:15,0:11:30.10:0,30,925	./.	./.	0/0:7,0:2:3.01:0,3,54	1/1:8,14:20:0.47:1,0,0	1/1:5,11:16:1.89:3,2,0	1/1:15,14:24:0.47:1,0,0	0/0:23,0:22:47.51:0,48,1502	0/0:22,0:21:54.18:0,54,1542	./.	0/0:8,0:6:15.05:0,15,573
chr10	50535680	.	GAC	G	406.90	PASS	AC=14;AF=0.292;AN=48;BaseQRankSum=5.860;DP=480;FS=7.087;HRun=0;HaplotypeScore=84.1058;InbreedingCoeff=0.6781;MQ=49.57;MQ0=39;MQRankSum=-0.963;QD=2.93;ReadPosRankSum=0.566;VQSLOD=1.2108;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:2,12:14:3.01:43,3,0	0/0:11,0:9:11.07:0,11,106	0/0:8,0:2:5.12:0,5,23	0/0:29,0:6:11.56:0,12,157	0/0:22,0:21:51.10:0,51,809	1/1:14,9:17:17.83:231,18,0	1/1:15,0:9:5.87:64,6,0	./.	1/1:16,0:16:9.03:120,9,0	0/0:29,0:26:71.46:0,71,1144	0/0:17,0:17:45.08:0,45,752	1/1:18,0:18:3.01:39,3,0	1/1:22,0:20:2.55:18,3,0	0/0:29,0:27:62.55:0,63,945	0/0:37,0:36:38.73:0,39,469	1/1:31,0:29:2.98:39,3,0	0/0:21,0:20:45.14:0,45,774	0/0:13,0:11:27.51:0,28,429	./.	./.	0/0:6,0:2:3.01:0,3,55	0/0:18,0:17:0.94:0,1,2	0/0:15,0:15:0.47:0,0,1	0/0:25,0:24:0:0,0,0	0/0:25,0:24:53.51:0,54,818	0/0:21,0:21:60.16:0,60,994	./.	0/0:6,0:6:18.04:0,18,297
chr10	50535714	.	GACAGAT	G	788.83	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=7.446;DP=592;FS=5.569;HRun=0;HaplotypeScore=138.9026;InbreedingCoeff=0.9120;MQ=61.43;MQ0=20;MQRankSum=-3.054;QD=15.17;ReadPosRankSum=-5.056;VQSLOD=0.9470;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:21:0,21,397	0/0:13,0:11:30.09:0,30,950	0/0:30,0:19:33.95:0,34,963	0/0:47,0:17:21.58:0,22,347	0/0:24,0:24:65.59:0,66,1806	0/0:21,0:20:42.14:0,42,1076	0/0:14,0:13:27.07:0,27,770	1/1:13,0:12:36.04:431,36,0	0/0:22,0:22:24.55:0,25,865	0/0:30,0:30:90.30:0,90,2760	0/0:18,0:18:51.12:0,51,1569	0/0:18,0:18:21.93:0,22,502	0/0:32,0:31:39.55:0,40,935	0/0:22,0:21:54.19:0,54,1886	0/0:42,0:42:93.17:0,93,2983	0/0:30,0:29:24.08:0,24,636	0/0:25,0:25:61.07:0,61,1783	0/0:11,0:9:21.01:0,21,552	1/1:0,8:8:23.88:185,24,0	1/1:8,0:8:6.01:61,6,0	0/1:10,0:9:0:0,0,0	0/0:20,0:20:23.26:0,23,550	0/0:17,0:17:22.20:0,22,645	0/0:21,0:21:11.66:0,12,247	0/0:25,0:25:72.16:0,72,1928	0/0:27,0:27:78.23:0,78,2379	1/1:13,0:13:23.93:264,24,0	0/0:9,0:9:27.04:0,27,713
chr10	50536363	.	G	GTCTA	4597.75	PASS	AB=1.000;AC=27;AF=0.500;AN=54;BaseQRankSum=-0.735;DP=729;FS=6.722;HRun=0;HaplotypeScore=132.0736;InbreedingCoeff=0.8996;MQ=63.50;MQ0=9;MQRankSum=-3.005;QD=11.16;ReadPosRankSum=-1.016;VQSLOD=3.9200;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:26:20.78:199,21,0	0/0:14,0:14:15.03:0,15,209	./.	0/1:20,0:14:0:0,0,0	0/0:29,0:29:36.01:0,36,399	0/0:23,0:23:42.12:0,42,605	0/0:15,0:15:21.04:0,21,280	1/1:47,0:45:23.72:159,24,0	0/0:12,0:12:18.06:0,18,276	0/0:31,0:31:27.09:0,27,417	0/0:26,0:27:60.08:0,60,751	1/1:13,0:23:27.09:467,27,0	1/1:13,0:24:14.76:256,15,0	1/1:10,16:26:27.09:633,27,0	0/0:33,0:33:45.07:0,45,585	0/0:28,0:28:51.09:0,51,655	0/0:22,0:22:33.11:0,33,509	0/0:15,0:14:17.98:0,18,204	1/1:16,11:26:38.87:672,39,0	1/1:17,19:37:30.10:704,30,0	1/1:12,8:20:12.04:281,12,0	1/1:16,0:27:3.01:52,3,0	1/1:21,0:33:5.79:104,6,0	1/1:12,0:21:6.02:97,6,0	1/1:16,1:28:15.05:279,15,0	0/0:30,0:30:45.08:0,45,572	1/1:26,25:52:30.10:694,30,0	0/0:12,0:13:12.03:0,12,164
chr10	50538533	.	AT	A	2954.30	PASS	AB=0.816;AC=35;AF=0.625;AN=56;BaseQRankSum=3.477;DP=431;FS=3.726;HRun=11;HaplotypeScore=64.5102;InbreedingCoeff=0.7381;MQ=71.44;MQ0=1;MQRankSum=0.027;QD=10.74;ReadPosRankSum=3.618;VQSLOD=3.1684;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,4:11:11.28:97,11,0	0/1:5,4:9:9.22:84,0,9	0/1:8,1:9:13.12:13,0,42	0/0:13,0:9:14.68:0,15,81	0/0:12,0:26:64.74:0,65,405	1/1:9,12:21:26.88:222,27,0	1/1:3,9:12:32.92:267,33,0	1/1:11,0:28:29.03:92,29,0	1/1:7,4:11:23.92:191,24,0	0/0:9,0:9:24.03:0,24,243	0/0:11,0:11:33.01:0,33,330	1/1:3,8:11:32.95:268,33,0	1/1:5,13:18:50.91:414,51,0	0/0:16,0:16:45.10:0,45,473	1/1:1,19:21:58.97:474,59,0	1/1:1,10:11:23.25:196,23,0	0/0:20,1:21:20.47:0,20,423	0/1:10,2:12:16.23:16,0,245	1/1:6,0:18:23.28:67,23,0	1/1:10,0:23:5.64:42,6,0	1/1:2,0:3:3.28:9,3,0	1/1:4,9:14:31.97:249,32,0	1/1:4,9:13:20.53:171,21,0	1/1:2,7:9:23.96:195,24,0	0/0:20,0:20:56.44:0,56,513	0/0:23,1:24:38.48:0,38,590	1/1:2,0:21:34.13:99,34,0	0/0:15,0:15:39.10:0,39,416
chr10	50538650	.	TA	T	2256.89	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=10.502;DP=514;FS=7.957;HRun=9;HaplotypeScore=52.2371;InbreedingCoeff=0.9751;MQ=68.40;MQ0=0;MQRankSum=-0.795;QD=23.03;ReadPosRankSum=-0.716;VQSLOD=4.0248;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:48.13:0,48,539	0/0:8,0:8:24.07:0,24,274	0/0:12,0:12:25.86:0,26,256	0/0:6,0:6:11.06:0,11,105	0/0:35,0:35:99:0,102,1158	0/0:23,0:23:57.17:0,57,658	0/0:14,0:14:39.10:0,39,434	1/1:1,24:25:69.04:631,69,0	0/0:11,0:11:24.07:0,24,277	0/0:26,0:26:66.20:0,66,762	0/0:27,0:27:78.17:0,78,866	0/0:18,0:18:51.15:0,51,589	0/0:16,0:16:39.10:0,39,439	0/0:19,0:19:54.16:0,54,623	0/0:19,0:19:57.12:0,57,633	0/0:26,0:26:75.20:0,75,845	0/0:12,0:12:33.06:0,33,366	0/0:14,0:14:36.09:0,36,404	1/1:1,15:16:45.02:408,45,0	1/1:1,23:24:68.96:621,69,0	1/1:0,3:3:9:82,9,0	0/0:12,0:12:33.10:0,33,381	0/0:20,0:21:56.99:0,57,624	0/0:9,0:9:24.02:0,24,252	0/0:23,0:23:56.83:0,57,624	0/0:29,0:29:81.22:0,81,913	1/1:5,25:30:75.04:686,75,0	0/0:16,1:17:23.69:0,24,526
chr10	50538716	.	T	TAGTCCATTG	13217.95	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-3.111;DP=532;FS=9.039;HRun=0;HaplotypeScore=135.5236;InbreedingCoeff=0.9825;MQ=66.19;MQ0=0;MQRankSum=-12.120;QD=94.41;ReadPosRankSum=-5.725;VQSLOD=3.3276;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:63.19:0,63,1701	0/0:11,0:11:24.08:0,24,707	0/0:4,0:4:9.03:0,9,265	0/0:11,0:11:30.10:0,30,775	0/0:26,0:26:69.22:0,69,1949	0/0:16,0:16:42.14:0,42,1237	0/0:7,0:7:18.06:0,18,508	1/1:18,13:36:82.50:2794,83,0	0/0:12,0:12:36.12:0,36,1060	0/0:21,0:21:51.18:0,51,1502	0/0:28,0:28:78.25:0,78,2172	0/0:19,0:19:54.17:0,54,1479	0/0:20,0:20:57.18:0,57,1615	0/0:20,0:20:60.21:0,60,1688	0/0:26,0:26:72.25:0,72,2043	0/0:25,0:25:72.23:0,72,2055	0/0:13,0:13:36.11:0,36,996	0/0:11,0:11:27.09:0,27,751	1/1:23,7:30:72.24:2651,72,0	1/1:11,21:35:96.32:3506,96,0	1/1:6,3:10:21.07:681,21,0	0/0:9,0:9:27.08:0,27,692	0/0:21,0:21:60.21:0,60,1704	0/0:11,0:11:27.09:0,27,795	0/0:19,0:19:57.17:0,57,1547	0/0:27,0:27:75.26:0,75,2034	1/1:13,16:28:84.29:3587,84,0	0/0:14,0:14:42.14:0,42,1063
chr10	50540307	.	AG	A	4884.60	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=11.302;DP=639;FS=3.119;HRun=2;HaplotypeScore=68.4413;InbreedingCoeff=0.9988;MQ=71.49;MQ0=1;MQRankSum=0.246;QD=37.00;ReadPosRankSum=-2.595;VQSLOD=4.4317;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,120,1795	0/0:13,0:13:39.13:0,39,584	0/0:17,0:16:37.66:0,38,459	0/0:30,0:27:53.83:0,54,838	0/0:25,0:25:75.25:0,75,1109	0/0:23,0:23:69.23:0,69,1034	0/0:19,0:19:57.18:0,57,833	1/1:1,41:42:99:1502,120,0	0/0:25,0:25:72.24:0,72,1056	0/0:24,0:24:72.13:0,72,1033	0/0:21,0:21:63.21:0,63,943	0/0:19,0:19:57.17:0,57,816	0/0:31,0:31:93.32:0,93,1393	0/0:22,0:22:63.21:0,63,930	0/0:30,0:30:87.29:0,87,1304	0/0:27,0:27:78.26:0,78,1145	0/0:20,0:20:60.19:0,60,878	0/0:9,0:9:27.09:0,27,405	1/1:0,20:20:60.19:777,60,0	1/1:0,21:21:60.20:779,60,0	1/1:0,19:19:57.18:737,57,0	0/0:16,0:16:48.15:0,48,701	0/0:17,0:17:51.16:0,51,743	0/0:21,0:21:63.20:0,63,923	0/0:23,0:23:66.22:0,66,989	0/0:23,0:23:66.22:0,66,989	1/1:0,30:30:84.27:1091,84,0	0/0:7,0:7:21.07:0,21,315
chr10	50542513	.	GTGTGCTGTCA	G	8807.06	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=14.650;DP=732;FS=0.843;HRun=0;HaplotypeScore=216.2327;InbreedingCoeff=0.9984;MQ=84.36;MQ0=0;MQRankSum=-12.354;QD=69.90;ReadPosRankSum=-1.221;VQSLOD=4.5750;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:96.33:0,96,5053	0/0:11,0:11:33.11:0,33,1753	0/0:27,0:26:74.78:0,75,3446	0/0:33,0:32:87.30:0,87,4165	0/0:28,0:28:84.29:0,84,4409	0/0:33,0:33:90.31:0,90,4675	0/0:33,0:33:96.33:0,96,4679	1/1:10,25:35:75.24:2258,75,0	0/0:21,0:21:63.22:0,63,3288	0/0:37,0:37:99:0,108,5406	0/0:24,0:24:72.25:0,72,3779	0/0:27,0:27:78.27:0,78,4010	0/0:26,0:26:78.27:0,78,3967	0/0:19,0:19:57.20:0,57,2978	0/0:34,0:34:99:0,102,5296	0/0:30,0:29:90.30:0,90,4470	0/0:28,0:28:84.28:0,84,3978	0/0:12,0:12:36.12:0,36,1871	1/1:4,11:15:33.09:972,33,0	1/1:2,23:25:66.23:2147,66,0	1/1:3,13:16:24.08:737,24,0	0/0:19,0:19:54.17:0,54,2669	0/0:26,0:26:75.26:0,75,3895	0/0:37,0:37:99:0,105,5411	0/0:23,0:23:69.24:0,69,3414	0/0:35,0:35:99:0,102,5009	1/1:3,32:35:81.28:2694,81,0	0/0:8,0:8:21.07:0,21,1089
chr10	50542906	.	C	CAA	6374.66	PASS	AB=0.596;AC=31;AF=0.554;AN=56;BaseQRankSum=2.448;DP=697;FS=4.350;HRun=12;HaplotypeScore=117.6057;InbreedingCoeff=0.7669;MQ=71.78;MQ0=1;MQRankSum=-0.354;QD=14.13;ReadPosRankSum=-4.415;VQSLOD=2.7480;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:5,16:22:44.88:587,45,0	1/1:1,0:9:19.96:69,20,0	0/0:17,0:17:16.10:0,16,173	0/0:21,0:21:13.06:0,13,139	0/0:35,0:36:59.58:0,60,550	1/1:6,0:24:15.68:131,16,0	0/1:6,2:21:15.66:127,0,16	1/1:12,23:37:81.58:1023,82,0	1/1:8,0:33:42.88:158,43,0	0/0:32,0:35:74.28:0,74,701	0/0:16,0:19:32.75:0,33,352	1/1:4,27:33:45.15:626,45,0	1/1:9,23:35:45.84:511,46,0	0/0:21,0:22:41.17:0,41,354	1/1:6,0:27:25.15:146,25,0	1/1:8,0:24:6.43:87,6,0	0/0:21,0:21:52.49:0,52,468	0/0:11,0:14:36.08:0,36,310	1/1:12,10:24:38.59:475,39,0	0/1:6,11:24:12.04:333,0,12	1/1:6,17:25:42.15:468,42,0	1/1:8,13:24:27.01:474,27,0	0/1:11,12:26:40.85:288,0,41	1/1:7,20:29:22.28:481,22,0	0/0:23,0:24:41.54:0,42,369	0/0:25,0:26:47.82:0,48,491	1/1:4,23:31:32.29:389,32,0	0/0:9,0:9:20.96:0,21,194
chr10	50544934	.	GTT	G	4737.09	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=10.728;DP=609;FS=13.084;HRun=12;HaplotypeScore=89.5639;InbreedingCoeff=0.9972;MQ=70.57;MQ0=0;MQRankSum=-3.169;QD=16.39;ReadPosRankSum=5.406;VQSLOD=2.1862;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,37:42:77.85:846,78,0	1/1:2,7:9:21.02:214,21,0	0/0:13,0:12:26.57:0,27,341	0/0:15,0:15:23.56:0,24,145	0/0:33,0:37:85.83:0,86,1030	0/0:19,1:21:20.59:0,21,579	0/0:11,0:17:46.57:0,47,537	1/1:4,0:20:43.36:188,43,0	0/0:12,0:12:27.09:0,27,399	0/0:25,1:26:30.53:0,31,744	0/0:31,0:31:83.97:0,84,1110	1/1:2,19:22:38.81:449,39,0	1/1:3,15:18:39.08:396,39,0	0/0:18,0:19:41.61:0,42,532	1/1:3,18:24:38.26:482,38,0	0/0:29,0:30:68.68:0,69,907	0/0:23,0:23:69.21:0,69,972	0/0:20,0:22:53.66:0,54,751	1/1:5,1:23:39.16:193,39,0	1/1:2,0:14:21.91:95,22,0	1/1:2,0:25:43.62:187,44,0	1/1:1,13:14:30.03:303,30,0	1/1:2,17:20:29.78:357,30,0	1/1:3,36:40:55.57:873,56,0	0/0:17,0:19:46.34:0,46,538	0/0:24,0:24:29.69:0,30,705	1/1:2,0:18:35.67:154,36,0	0/0:9,0:9:27.09:0,27,402
chr10	50545394	.	CATT	C	1458.71	PASS	AB=1.000;AC=18;AF=0.563;AN=32;BaseQRankSum=-5.443;DP=275;FS=13.096;HRun=0;HaplotypeScore=65.8658;InbreedingCoeff=0.3206;MQ=70.85;MQ0=0;MQRankSum=2.546;QD=7.12;ReadPosRankSum=-0.050;VQSLOD=0.5913;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:23:6.51:7,0,93	./.	./.	./.	1/1:6,16:22:21.06:250,21,0	0/0:16,0:16:23.93:0,24,329	0/0:3,0:3:3:0,3,25	./.	./.	1/1:20,0:19:29.91:309,30,0	1/1:6,5:11:3.01:41,3,0	0/0:11,0:11:11.97:0,12,99	./.	1/1:6,7:13:3.01:41,3,0	0/1:13,0:13:15.35:61,0,15	0/0:6,0:6:9.02:0,9,132	0/1:26,0:26:39:39,0,137	1/1:10,18:28:11.91:165,12,0	./.	./.	./.	./.	0/0:13,0:13:14.72:0,15,104	./.	0/1:20,0:20:51.26:254,0,51	1/1:15,9:24:4.26:294,4,0	./.	1/1:5,0:5:12.01:130,12,0
chr10	50545423	.	TTAG	T	399.12	PASS	AB=1.000;AC=11;AF=0.262;AN=42;BaseQRankSum=1.177;DP=261;FS=0.000;HRun=0;HaplotypeScore=68.7501;InbreedingCoeff=-0.0612;MQ=52.99;MQ0=3;MQRankSum=2.223;QD=3.09;ReadPosRankSum=5.009;VQSLOD=0.5150;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:20:32.78:0,33,348	0/0:5,0:4:2.92:0,3,17	0/0:14,0:7:20.93:0,21,188	0/0:10,0:5:8.11:0,8,95	0/1:22,0:22:77.38:84,0,77	0/1:11,0:11:34.92:35,0,127	./.	./.	./.	0/1:12,0:12:34.47:34,0,38	0/0:13,0:13:6.48:0,6,144	0/0:10,0:11:5.93:0,6,40	0/0:8,0:8:11.81:0,12,77	0/0:12,0:12:0.57:0,1,105	0/0:13,0:13:17.88:0,18,162	0/0:4,0:4:6:0,6,54	1/1:7,12:19:15.01:192,15,0	0/1:21,0:21:50.63:51,0,53	./.	./.	./.	0/0:4,0:3:1.53:0,2,5	0/0:12,0:12:11.79:0,12,80	1/1:4,0:4:1.51:4,2,0	0/1:17,0:17:30.45:30,0,134	0/1:17,0:17:75.74:76,0,167	./.	0/1:6,0:6:20.25:20,0,35
chr10	50545440	.	AGTAGTG	A	94.23	PASS	AB=0.948;AC=9;AF=0.196;AN=46;BaseQRankSum=2.923;DP=325;FS=22.309;HRun=0;HaplotypeScore=105.8144;InbreedingCoeff=0.1473;MQ=51.28;MQ0=5;MQRankSum=-0.305;QD=1.07;ReadPosRankSum=-3.329;VQSLOD=-0.1637;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:22:38.54:0,39,746	0/0:7,0:6:3.01:0,3,53	0/0:21,0:13:38.96:0,39,708	0/0:14,0:8:24.05:0,24,405	0/1:22,0:21:30.26:30,0,339	0/1:16,0:16:2.80:3,0,369	0/0:10,0:10:17.94:0,18,147	./.	0/0:6,0:6:14.90:0,15,118	0/0:11,0:11:0.07:0,0,293	0/0:16,0:16:33.05:0,33,557	0/1:11,1:12:17.09:17,0,38	0/1:7,2:9:33.21:33,0,60	0/0:13,0:13:30.07:0,30,545	0/1:15,0:15:15.07:15,0,274	0/0:10,0:10:23.25:0,23,222	0/0:17,0:17:9.06:0,9,264	0/0:21,0:21:27.06:0,27,471	./.	./.	./.	1/1:5,1:5:0.85:21,1,0	0/0:12,0:12:10.65:0,11,82	1/1:5,3:8:13.53:101,14,0	0/0:15,0:15:9.88:0,10,624	0/0:22,0:22:29.09:0,29,848	./.	0/0:14,0:14:9.84:0,10,469
chr10	50545474	.	A	ATAG	5680.23	PASS	AB=0.542;AC=23;AF=0.500;AN=46;BaseQRankSum=3.243;DP=335;FS=44.835;HRun=0;HaplotypeScore=79.2548;InbreedingCoeff=0.8847;MQ=63.49;MQ0=0;MQRankSum=-0.785;QD=35.95;ReadPosRankSum=1.276;VQSLOD=3.2862;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:20:39.13:579,39,0	1/1:2,1:9:11.72:130,12,0	0/0:24,0:22:32.88:0,33,351	0/0:18,0:16:28.93:0,29,275	0/0:12,0:12:36.12:0,36,520	1/1:4,13:18:30.10:613,30,0	1/1:1,14:15:27.09:552,27,0	./.	1/1:1,7:9:21.07:404,21,0	0/0:10,0:10:24.08:0,24,332	0/0:14,0:14:36.12:0,36,519	1/1:0,15:15:33.11:675,33,0	1/1:1,14:16:39.13:774,39,0	0/0:13,0:13:33.11:0,33,477	1/1:2,1:17:37.30:396,37,0	1/1:0,17:17:39.13:774,39,0	0/0:21,0:21:36.08:0,36,479	0/0:16,0:16:20.91:0,21,276	./.	./.	./.	1/1:2,1:3:6.02:100,6,0	1/1:2,3:5:12.04:245,12,0	0/1:2,11:13:16.29:438,0,16	0/0:15,0:15:42.12:0,42,585	0/0:18,0:18:45.14:0,45,635	./.	0/0:16,0:16:48.14:0,48,659
chr10	50545483	.	G	GTAC	3775.25	PASS	AB=1.000;AC=18;AF=0.391;AN=46;BaseQRankSum=7.657;DP=346;FS=65.894;HRun=0;HaplotypeScore=84.9114;InbreedingCoeff=0.4743;MQ=68.74;MQ0=0;MQRankSum=-2.375;QD=22.61;ReadPosRankSum=5.600;VQSLOD=1.1417;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,23:23:39.13:881,39,0	0/1:11,0:10:14.49:50,0,14	0/0:23,0:21:46.46:0,46,636	0/0:16,0:15:29.01:0,29,410	0/0:13,0:13:39.12:0,39,635	0/1:18,0:18:31.85:358,0,32	1/1:15,0:15:5.10:307,5,0	./.	0/1:10,0:10:0.92:238,0,1	0/0:10,0:10:30.09:0,30,462	0/0:13,0:13:39.12:0,39,635	1/1:16,0:16:11.12:401,11,0	0/1:18,0:18:1.87:448,0,2	0/0:16,0:16:45.09:0,45,658	0/1:18,0:18:13.63:155,0,14	1/1:18,0:18:39.08:483,39,0	0/0:20,0:20:39.11:0,39,624	0/0:17,0:17:37.33:0,37,445	./.	./.	./.	1/1:2,0:2:3.01:37,3,0	1/1:4,0:4:12.04:148,12,0	0/1:14,0:14:43.97:268,0,44	0/0:17,0:17:51.13:0,51,784	0/0:18,0:18:51.14:0,51,813	./.	0/0:16,0:16:48.16:0,48,808
chr10	50546513	.	C	CTGG	1200.61	PASS	AB=1.000;AC=23;AF=0.460;AN=50;BaseQRankSum=0.538;DP=243;FS=2.021;HRun=0;HaplotypeScore=50.2968;InbreedingCoeff=0.5573;MQ=66.27;MQ0=19;MQRankSum=-2.185;QD=11.22;ReadPosRankSum=-0.379;VQSLOD=3.0746;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:5:3.01:0,3,55	./.	0/1:34,0:16:30.47:30,0,190	0/0:33,0:8:7.95:0,8,55	0/0:8,0:8:6.02:0,6,95	1/1:9,2:11:24.08:446,24,0	1/1:3,7:12:11.93:207,12,0	1/1:3,0:3:2.74:12,3,0	1/1:5,0:6:5.38:59,5,0	0/0:10,0:9:27.04:0,27,399	0/0:13,0:12:18.05:0,18,246	1/1:1,0:2:2.88:38,3,0	1/1:1,0:1:2.80:13,3,0	0/0:13,0:12:30.09:0,30,455	1/1:1,0:4:6.02:67,6,0	1/1:6,0:11:18.53:355,19,0	0/0:16,0:15:14.85:0,15,218	0/0:7,0:7:2.97:0,3,20	1/1:2,0:3:8.76:53,9,0	./.	0/0:1,0:1:0.89:0,1,2	0/0:1,0:1:3.01:0,3,55	./.	1/1:4,0:1:2.96:19,3,0	0/0:11,0:11:9.03:0,9,118	0/0:9,0:8:6.02:0,6,92	1/1:2,0:2:5.95:69,6,0	0/0:4,0:4:3.01:0,3,32
chr10	50546595	.	CTCCTCCAGCAATCTTAGTTTGTTGTTTG	C	3611.40	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=6.630;DP=327;FS=1.006;HRun=0;HaplotypeScore=224.8067;InbreedingCoeff=0.8697;MQ=93.76;MQ0=0;MQRankSum=-6.589;QD=97.61;ReadPosRankSum=3.422;VQSLOD=3.2320;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:33.11:0,33,3464	0/0:6,0:6:18.06:0,18,2101	0/0:16,0:16:48.16:0,48,3142	0/0:16,0:16:42.12:0,42,2492	0/0:12,0:12:36.11:0,36,3868	1/1:6,9:15:24.08:1806,24,0	1/1:3,6:9:9.03:677,9,0	0/0:14,0:14:42.14:0,42,3469	1/1:0,6:6:3.01:226,3,0	0/0:17,0:17:51.18:0,51,5736	0/0:14,0:14:42.14:0,42,4382	0/0:6,0:6:15.05:0,15,1457	0/0:8,0:8:24.08:0,24,2626	0/0:18,0:18:54.19:0,54,5455	0/0:13,0:13:33.11:0,33,3747	1/1:2,5:7:12.04:903,12,0	0/0:22,0:22:63.22:0,63,7697	0/0:20,0:20:57.20:0,57,5746	0/0:15,0:15:42.14:0,42,3614	0/0:9,0:9:24.08:0,24,2961	0/0:8,0:8:24.06:0,24,2088	0/0:3,0:3:9.03:0,9,1110	0/0:2,0:2:6.02:0,6,692	0/0:12,0:12:36.12:0,36,4448	0/0:10,0:10:30.09:0,30,3439	0/0:19,0:19:57.20:0,57,6483	0/0:9,0:9:27.09:0,27,3098	0/0:10,0:10:30.10:0,30,3429
chr10	50546779	.	T	TA	5695.64	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=-11.972;DP=519;FS=0.356;HRun=8;HaplotypeScore=48.2062;InbreedingCoeff=0.9010;MQ=69.33;MQ0=0;MQRankSum=-0.103;QD=27.92;ReadPosRankSum=-1.550;VQSLOD=4.6648;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:63.02:0,63,573	0/0:5,0:5:15.01:0,15,137	0/1:8,0:8:40.83:46,0,41	0/0:8,0:7:5.80:0,6,44	0/0:18,0:18:47.95:0,48,428	1/1:2,26:28:72.21:830,72,0	1/1:2,15:17:48.05:526,48,0	1/1:4,24:28:47.72:770,48,0	1/1:0,11:11:33.10:381,33,0	0/0:32,0:32:87.04:0,87,796	0/0:21,0:21:63.02:0,63,569	0/0:13,0:13:36.02:0,36,329	0/0:26,0:26:69.03:0,69,628	0/0:24,0:24:66.02:0,66,601	0/0:23,0:23:69.04:0,69,631	1/1:3,22:25:63.19:727,63,0	0/0:27,0:27:75.04:0,75,686	0/0:11,0:11:33.02:0,33,302	1/1:7,26:33:78.18:862,78,0	1/1:2,16:18:28.04:516,28,0	1/1:0,13:13:33.10:381,33,0	0/0:10,0:10:24.01:0,24,220	0/0:11,0:11:33.02:0,33,302	0/0:9,0:9:24.01:0,24,220	0/0:18,0:18:45.02:0,45,412	0/0:19,0:19:54.02:0,54,490	1/1:3,20:23:57.17:657,57,0	0/0:15,0:14:45.02:0,45,412
chr10	50548244	.	C	CCTCTCT	1576.06	PASS	AB=1.000;AC=29;AF=0.604;AN=48;BaseQRankSum=1.258;DP=569;FS=33.730;HRun=0;HaplotypeScore=154.1621;InbreedingCoeff=0.2798;MQ=68.48;MQ0=11;MQRankSum=-2.391;QD=4.53;ReadPosRankSum=-2.518;VQSLOD=0.9047;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:12,0:12:14.98:182,15,0	0/1:13,0:13:1.96:2,0,50	./.	./.	0/1:25,0:25:18.26:18,0,88	0/1:28,0:27:18.35:205,0,18	1/1:21,0:20:21.86:247,22,0	1/1:34,0:35:16.05:132,16,0	0/0:10,0:15:4.28:0,4,62	0/0:27,0:26:5.13:0,5,131	0/0:17,0:20:27.09:0,27,525	1/1:13,0:13:2.98:22,3,0	0/1:20,0:20:9.34:135,0,9	0/0:23,0:23:15.04:0,15,245	0/0:20,0:20:34.63:0,35,394	1/1:17,5:24:3.01:33,3,0	0/0:19,0:20:29.81:0,30,460	0/1:16,0:17:32.14:32,0,159	1/1:21,0:19:14.94:187,15,0	./.	./.	1/1:15,0:15:6.38:104,6,0	1/1:20,0:20:17.90:206,18,0	1/1:14,0:13:2.98:22,3,0	0/1:18,0:16:33.85:34,0,145	0/1:26,0:26:5.94:6,0,214	1/1:17,0:14:11.90:168,12,0	1/1:9,0:9:2.04:6,2,0
chr10	50548272	.	TC	T	153.70	PASS	AB=0.882;AC=3;AF=0.054;AN=56;BaseQRankSum=5.370;DP=534;FS=5.618;HRun=1;HaplotypeScore=94.9284;InbreedingCoeff=0.4988;MQ=52.44;MQ0=10;MQRankSum=1.884;QD=4.39;ReadPosRankSum=2.381;VQSLOD=0.6680;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:30.09:0,30,383	0/1:13,2:15:52.92:53,0,106	0/0:15,0:7:16.29:0,16,192	0/0:15,0:8:20.55:0,21,232	0/0:23,0:23:55.82:0,56,701	0/0:31,0:30:75.66:0,76,941	0/0:18,0:17:33.58:0,34,453	0/0:36,0:36:99:0,101,1074	0/0:14,0:13:18.05:0,18,220	0/0:26,0:25:72.23:0,72,951	0/0:20,0:20:51.17:0,51,734	0/0:7,0:7:3.01:0,3,43	0/0:21,0:21:36.09:0,36,464	0/0:22,0:22:51.14:0,51,680	1/1:10,10:19:12.83:201,13,0	0/0:15,0:15:21.07:0,21,284	0/0:29,0:29:70.27:0,70,922	0/0:17,0:17:24.80:0,25,563	0/0:15,0:15:9.37:0,9,358	0/0:19,0:17:29.25:0,29,236	0/0:8,0:8:17.82:0,18,178	0/0:20,0:20:43.37:0,43,442	0/0:21,0:21:25.86:0,26,305	0/0:13,0:12:9.03:0,9,119	0/0:20,0:20:44.30:0,44,578	0/0:26,0:26:78.24:0,78,1027	0/0:22,0:19:43.21:0,43,447	0/0:10,0:9:26.11:0,26,319
chr10	50548274	.	TC	T	147.78	PASS	AB=0.938;AC=4;AF=0.071;AN=56;BaseQRankSum=5.700;DP=528;FS=0.000;HRun=1;HaplotypeScore=93.6412;InbreedingCoeff=0.2790;MQ=53.61;MQ0=10;MQRankSum=2.226;QD=3.08;ReadPosRankSum=0.245;VQSLOD=-0.3146;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:27.08:0,27,349	0/1:12,2:14:31.52:32,0,112	0/0:14,0:6:17.42:0,17,197	0/0:14,0:8:17.63:0,18,188	0/0:23,0:23:55.82:0,56,701	0/0:32,0:31:80.53:0,81,999	0/0:17,0:16:30.55:0,31,401	0/0:35,0:35:69.06:0,69,943	0/0:15,0:14:21.06:0,21,258	0/0:25,0:24:69.21:0,69,905	0/0:20,0:20:51.16:0,51,721	0/0:7,0:7:2.90:0,3,16	0/0:20,0:20:32.47:0,32,260	0/0:23,0:23:54.15:0,54,704	1/1:9,10:18:5.70:206,6,0	0/0:16,0:16:21.07:0,21,283	0/0:29,0:29:70.27:0,70,925	0/0:16,0:16:23.08:0,23,501	0/1:15,0:15:12:12,0,286	0/0:18,0:16:25.56:0,26,177	0/0:7,0:7:11.56:0,12,102	0/0:20,0:20:2.44:0,2,242	0/0:21,0:21:15.44:0,15,169	0/0:13,0:12:8.92:0,9,91	0/0:21,0:21:44.29:0,44,567	0/0:25,0:25:72.23:0,72,973	0/0:22,0:19:42.14:0,42,391	0/0:11,0:10:28.31:0,28,338
chr10	50548275	.	C	CTCTT	2727.62	PASS	AB=1.000;AC=20;AF=0.357;AN=56;BaseQRankSum=-0.250;DP=526;FS=14.953;HRun=0;HaplotypeScore=113.5981;InbreedingCoeff=0.0785;MQ=53.66;MQ0=10;MQRankSum=0.999;QD=9.95;ReadPosRankSum=0.167;VQSLOD=1.8498;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:15,0:15:74.39:81,0,74	0/1:14,0:14:24.83:133,0,25	0/0:15,0:7:8.15:0,8,114	0/0:13,0:8:4.83:0,5,73	0/0:23,0:23:48.91:0,49,440	0/1:32,0:31:52.10:52,0,321	0/1:15,0:14:16.11:16,0,108	0/1:35,0:35:99:318,0,162	0/0:15,0:14:15.69:0,16,155	0/0:25,0:24:62.53:0,63,617	0/0:20,0:20:45.07:0,45,656	1/1:1,5:7:3.01:81,3,0	1/1:3,14:19:1.03:490,1,0	0/0:22,0:22:41.84:0,42,492	0/1:19,0:18:45.98:58,0,46	0/0:15,0:15:20.97:0,21,173	0/0:29,0:29:71.81:0,72,837	0/0:17,0:17:35.57:0,36,371	0/1:15,0:15:17.99:186,0,18	0/1:19,0:17:31.42:165,0,31	0/1:6,0:6:13.95:44,0,14	1/1:2,17:21:40.49:503,40,0	1/1:3,17:22:6.73:439,7,0	1/1:6,6:12:3.01:81,3,0	0/0:21,0:21:39.29:0,39,397	0/0:26,0:26:68.11:0,68,697	0/1:22,0:19:46.51:254,0,47	0/0:11,0:10:27.19:0,27,203
chr10	50548963	.	AGAGGTAACTT	A	6129.09	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=13.739;DP=701;FS=7.418;HRun=0;HaplotypeScore=208.0617;InbreedingCoeff=0.9971;MQ=81.00;MQ0=1;MQRankSum=-9.986;QD=58.93;ReadPosRankSum=-3.236;VQSLOD=3.1025;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:93.32:0,93,4870	0/0:11,0:11:33.11:0,33,1563	0/0:23,0:23:60.21:0,60,2622	0/0:21,0:21:49:0,49,2246	0/0:44,0:44:99:0,129,6286	0/0:26,0:26:75.26:0,75,3737	0/0:29,0:29:87.30:0,87,4513	1/1:7,26:33:75.21:2170,75,0	0/0:26,0:26:75.26:0,75,3721	0/0:30,0:30:84.27:0,84,3962	0/0:27,0:27:78.27:0,78,3920	0/0:22,0:22:63.22:0,63,3362	0/0:33,0:33:93.32:0,93,4856	0/0:20,0:20:60.21:0,60,3019	0/0:28,0:28:84.29:0,84,4036	0/0:26,0:26:75.24:0,75,3759	0/0:35,0:35:99:0,105,5019	0/0:8,0:7:18.04:0,18,711	1/1:2,12:14:36.08:998,36,0	1/1:3,19:22:48.16:1282,48,0	1/1:2,14:16:20.95:345,21,0	0/0:28,0:28:84.29:0,84,4124	0/0:21,0:21:60.19:0,60,2709	0/0:27,0:27:72.25:0,72,3710	0/0:34,0:34:96.32:0,96,4714	0/0:29,0:29:87.30:0,87,4330	1/1:0,19:19:44.98:1334,45,0	0/0:18,0:18:54.19:0,54,2880
chr10	50549200	.	G	GT	6483.96	PASS	AB=0.545;AC=13;AF=0.232;AN=56;BaseQRankSum=-14.281;DP=740;FS=0.000;HRun=5;HaplotypeScore=70.3435;InbreedingCoeff=0.9234;MQ=81.88;MQ0=0;MQRankSum=-0.137;QD=33.60;ReadPosRankSum=-0.828;VQSLOD=4.8313;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:93.17:0,93,985	0/1:2,10:12:5.16:285,0,5	0/0:33,0:33:78.12:0,78,806	0/0:23,0:23:46.21:0,46,470	0/0:34,0:34:93.23:0,93,999	0/0:34,0:34:99:0,99,1054	0/0:23,0:23:63.12:0,63,660	1/1:1,34:36:99:1345,105,0	0/0:28,0:28:81.16:0,81,858	0/0:41,0:41:99:0,117,1252	0/0:18,0:18:51.13:0,51,547	0/0:27,0:27:72.17:0,72,774	0/0:29,0:29:87.22:0,87,934	0/0:24,0:24:66.14:0,66,700	1/1:3,25:28:72.23:947,72,0	0/0:15,0:15:42.11:0,42,451	0/0:18,0:18:45.06:0,45,470	0/0:15,0:15:35.76:0,36,365	1/1:1,23:24:69.22:907,69,0	1/1:4,33:37:93.30:1224,93,0	1/1:2,20:22:54.18:711,54,0	0/0:28,0:28:78.16:0,78,820	0/0:29,0:29:87.19:0,87,918	0/0:28,0:28:75.19:0,75,805	0/0:26,0:26:78.19:0,78,831	0/0:35,0:34:84.18:0,84,882	1/1:2,32:34:81.26:1065,81,0	0/0:7,0:7:21.05:0,21,226
chr10	50549379	.	A	ATCTC	3613.15	PASS	AB=0.943;AC=42;AF=0.778;AN=54;BaseQRankSum=-4.899;DP=586;FS=7.887;HRun=0;HaplotypeScore=127.8584;InbreedingCoeff=-0.0078;MQ=61.94;MQ0=11;MQRankSum=1.412;QD=6.61;ReadPosRankSum=-0.021;VQSLOD=1.5106;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:15:14.13:86,14,0	0/1:8,0:9:10.02:10,0,32	./.	0/1:32,0:15:0:0,0,0	1/1:13,1:18:10.28:110,10,0	0/1:20,0:21:7.73:8,0,78	1/1:8,0:15:8.23:37,8,0	1/1:31,0:31:2.94:18,3,0	0/1:11,0:17:27.07:57,0,27	1/1:13,14:29:43.76:569,44,0	1/1:12,0:22:8.63:102,9,0	1/1:6,8:18:15.05:334,15,0	1/1:9,3:20:21.07:439,21,0	1/1:11,6:17:12.03:236,12,0	0/1:18,0:18:2.76:3,0,141	1/1:7,7:15:6.02:141,6,0	1/1:12,0:23:9.03:137,9,0	1/1:10,0:10:4.56:45,5,0	0/1:18,0:15:8.66:85,0,9	0/1:26,0:26:78.43:105,0,78	0/0:11,0:11:11.95:0,12,111	0/1:13,5:18:38.17:61,0,38	1/1:31,0:30:9.33:258,9,0	0/1:19,0:19:6.08:61,0,6	1/1:16,6:26:5.75:83,6,0	1/1:15,10:28:40.40:533,40,0	0/1:23,0:23:20.53:21,0,133	1/1:17,4:22:0.73:76,1,0
chr10	50549417	.	CTCTT	C	1622.13	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=-0.849;DP=564;FS=2.818;HRun=0;HaplotypeScore=109.4814;InbreedingCoeff=0.4941;MQ=63.70;MQ0=12;MQRankSum=0.631;QD=9.06;ReadPosRankSum=-1.622;VQSLOD=2.8459;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:30.64:0,31,375	1/1:12,1:13:29.89:313,30,0	0/0:23,0:10:23.66:0,24,185	0/0:34,0:15:5.57:0,6,162	0/0:18,0:18:40.87:0,41,572	0/0:22,0:22:44.13:0,44,558	0/0:19,0:19:39.03:0,39,430	1/1:21,0:20:48.03:446,48,0	0/0:23,0:23:34.52:0,35,654	0/0:31,0:30:26.52:0,27,804	0/0:21,0:21:31.83:0,32,331	0/0:18,0:18:27.04:0,27,369	0/0:23,0:22:41.91:0,42,437	0/0:14,0:13:23.88:0,24,303	1/1:5,14:19:27.09:452,27,0	0/0:16,0:15:21.05:0,21,322	0/0:21,0:21:37.23:0,37,418	0/0:8,0:7:14.96:0,15,153	0/1:11,0:9:14.16:70,0,14	0/1:19,0:19:99:177,0,130	0/1:11,0:11:54.37:54,0,124	0/0:18,0:18:18.22:0,18,319	0/1:23,0:23:7.38:7,0,383	0/0:18,0:17:32.82:0,33,344	0/0:27,0:27:42.04:0,42,472	0/1:33,0:33:17.77:18,0,679	1/1:27,2:29:28.07:261,28,0	0/0:15,0:13:20.24:0,20,231
chr10	50550013	.	T	TG	5618.01	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-14.046;DP=787;FS=0.352;HRun=1;HaplotypeScore=72.9976;InbreedingCoeff=0.9998;MQ=82.97;MQ0=0;MQRankSum=-0.754;QD=38.48;ReadPosRankSum=2.802;VQSLOD=5.5213;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:32:88.17:0,88,1130	0/0:11,0:11:27.09:0,27,351	0/0:30,0:30:76.36:0,76,1056	0/0:25,0:25:68.98:0,69,855	0/0:36,0:36:99:0,102,1324	0/0:23,0:23:66.21:0,66,857	0/0:30,0:30:90.27:0,90,1148	0/0:34,0:34:90.29:0,90,1169	0/0:20,0:20:60.20:0,60,779	0/0:26,0:26:75.22:0,75,947	0/0:26,0:26:75.19:0,75,954	1/1:0,32:32:81.27:1214,81,0	1/1:0,24:24:63.21:944,63,0	0/0:30,0:30:81.25:0,81,1037	0/0:33,0:33:99:0,99,1285	0/0:35,0:35:99:0,105,1349	0/0:38,0:38:99:0,105,1334	0/0:15,0:15:42.08:0,42,511	0/0:24,0:24:72.23:0,72,935	0/0:32,0:32:93.30:0,93,1202	0/0:17,0:17:51.14:0,51,645	1/1:1,33:35:81.27:1213,81,0	1/1:1,33:34:90.25:1348,90,0	1/1:0,21:21:60.20:899,60,0	0/0:20,0:20:60.17:0,60,750	0/0:35,0:35:99:0,105,1335	0/0:47,0:47:99:0,135,1696	0/0:22,0:22:63.20:0,63,816
chr10	50551353	.	AT	A	11305.67	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=11.520;DP=703;FS=1.381;HRun=8;HaplotypeScore=71.1586;InbreedingCoeff=0.9981;MQ=86.20;MQ0=0;MQRankSum=-2.660;QD=24.52;ReadPosRankSum=1.829;VQSLOD=5.6978;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,59:63:99:1593,165,0	1/1:1,9:10:18.03:174,18,0	0/0:20,0:20:39.10:0,39,447	0/0:25,0:25:51.11:0,51,572	0/0:26,0:26:66.20:0,66,797	1/1:1,17:18:48.08:463,48,0	1/1:2,21:23:60.09:579,60,0	1/1:5,41:46:99:1168,123,0	1/1:3,23:26:66.10:637,66,0	0/0:21,0:21:57.17:0,57,688	0/0:17,0:17:39.12:0,39,471	1/1:2,18:20:54.09:521,54,0	1/1:3,20:23:60.10:579,60,0	0/0:25,0:25:63.19:0,63,761	1/1:3,26:29:66.10:637,66,0	1/1:2,31:33:87.14:840,87,0	0/0:30,0:30:84.23:0,84,1000	0/0:20,0:20:54.15:0,54,640	1/1:1,9:10:27.04:261,27,0	1/1:1,26:27:66.09:637,66,0	1/1:5,31:36:90.14:869,90,0	1/1:1,25:26:68.24:665,68,0	1/1:3,19:22:54.09:522,54,0	1/1:2,29:31:81.13:782,81,0	0/0:20,0:20:57.17:0,57,688	0/0:31,0:31:63.19:0,63,758	1/1:2,16:18:38.90:376,39,0	0/0:7,0:7:21.06:0,21,253
chr10	50552354	.	TGACAA	T	2178.28	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.536;DP=897;FS=0.632;HRun=0;HaplotypeScore=165.9278;InbreedingCoeff=0.9957;MQ=88.20;MQ0=0;MQRankSum=-4.619;QD=51.86;ReadPosRankSum=3.212;VQSLOD=3.8265;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,40:42:99:2273,105,0	0/0:11,0:11:33.11:0,33,1037	0/0:35,0:35:99:0,99,3026	0/0:30,0:31:84.23:0,84,2349	0/0:28,0:28:81.28:0,81,2494	0/0:25,0:25:75.26:0,75,2333	0/0:30,0:30:84.29:0,84,2574	0/0:31,0:31:93.32:0,93,2880	0/0:22,0:22:63.22:0,63,1948	0/0:36,0:36:99:0,99,3142	0/0:22,0:22:66.20:0,66,1903	0/0:47,0:47:99:0,135,4055	0/0:51,0:51:99:0,151,4685	0/0:39,0:39:99:0,117,3640	0/0:41,0:41:99:0,123,3902	0/0:33,0:33:99:0,99,3088	0/0:31,0:31:84.29:0,84,2636	0/0:29,0:29:81.28:0,81,2508	0/0:19,0:19:54.19:0,54,1677	0/0:34,0:34:99:0,102,3233	0/0:46,0:46:99:0,126,3846	0/0:34,0:34:99:0,99,3112	0/0:32,0:32:96.31:0,96,2924	0/0:39,0:39:99:0,114,3535	0/0:29,0:29:81.28:0,81,2525	0/0:39,0:39:99:0,114,3434	0/0:34,0:34:99:0,99,3139	0/0:7,0:7:21.07:0,21,666
chr10	50553605	.	A	ATT	4126.53	PASS	AB=0.585;AC=18;AF=0.321;AN=56;BaseQRankSum=0.269;DP=799;FS=12.395;HRun=13;HaplotypeScore=114.5156;InbreedingCoeff=0.8019;MQ=65.51;MQ0=1;MQRankSum=0.200;QD=12.86;ReadPosRankSum=-4.821;VQSLOD=-0.0749;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:33:26.87:205,27,0	0/0:4,0:12:21.91:0,22,94	0/0:13,0:12:8.61:0,9,59	0/0:13,0:12:11.67:0,12,91	0/0:22,0:22:38.72:0,39,339	0/1:8,3:31:44.75:178,0,45	1/1:6,0:20:16.41:76,16,0	1/1:17,16:34:52.07:578,52,0	0/1:11,0:34:19.41:62,0,19	0/0:34,0:34:53.68:0,54,472	0/0:11,0:11:14.88:0,15,132	0/0:30,0:34:38.35:0,38,381	0/0:36,0:37:39.90:0,40,615	0/0:36,0:39:56.09:0,56,531	0/0:7,0:42:76.63:0,77,329	1/1:6,1:34:30.48:216,30,0	0/0:30,1:33:22.30:0,22,597	0/0:13,0:13:29.91:0,30,264	1/1:14,11:25:42.07:517,42,0	1/1:3,27:35:96.16:1037,96,0	1/1:11,17:31:31.57:352,32,0	0/0:29,0:32:56.37:0,56,576	0/0:19,0:22:29.64:0,30,353	0/0:42,0:45:88.71:0,89,736	0/0:20,0:21:33.59:0,34,343	0/0:42,0:48:64.14:0,64,580	1/1:11,29:44:51.01:907,51,0	0/0:5,0:5:5.94:0,6,53
chr10	50553891	.	TG	T	3934.01	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=15.271;DP=624;FS=2.945;HRun=2;HaplotypeScore=67.1649;InbreedingCoeff=0.9996;MQ=82.97;MQ0=0;MQRankSum=-1.393;QD=34.51;ReadPosRankSum=3.537;VQSLOD=4.1954;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:84.25:0,84,1218	1/1:0,10:10:30.10:390,30,0	0/0:18,0:18:54.18:0,54,793	0/0:21,0:21:55.86:0,56,844	0/0:26,0:26:72.24:0,72,1069	1/1:0,22:22:63.20:818,63,0	1/1:1,21:22:57.19:740,57,0	0/0:22,0:22:60.19:0,60,864	1/1:1,16:17:45.15:584,45,0	0/0:31,0:31:90.30:0,90,1349	0/0:13,0:13:39.13:0,39,580	0/0:26,0:26:78.26:0,78,1169	0/0:31,0:31:93.31:0,93,1371	0/0:19,0:19:57.14:0,57,770	1/1:0,21:21:57.19:740,57,0	1/1:1,21:22:51.11:662,51,0	0/0:26,0:26:75.25:0,75,1123	0/0:20,0:20:60.20:0,60,898	0/0:27,0:27:81.27:0,81,1195	0/0:27,0:27:81.27:0,81,1204	0/0:11,0:11:33.09:0,33,474	0/0:27,0:27:81.27:0,81,1209	0/0:22,0:22:63.21:0,63,933	0/0:22,0:22:66.22:0,66,989	0/0:17,0:17:51.17:0,51,760	0/0:26,0:25:72.24:0,72,1078	0/0:41,0:40:99:0,123,1837	0/0:9,0:9:27.09:0,27,404
chr10	50554625	.	AG	A	4211.57	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=8.670;DP=672;FS=3.223;HRun=1;HaplotypeScore=194.9160;InbreedingCoeff=0.9922;MQ=87.07;MQ0=1;MQRankSum=-13.883;QD=32.65;ReadPosRankSum=-2.296;VQSLOD=3.8875;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:57.19:0,57,828	0/0:9,0:9:24.08:0,24,356	0/0:27,0:27:74.89:0,75,1041	0/0:27,0:27:74.43:0,74,1033	0/0:27,0:27:57.16:0,57,788	0/0:34,0:34:93.31:0,93,1341	0/0:22,0:22:63.08:0,63,836	1/1:0,32:32:96.27:1123,96,0	0/0:26,0:26:63.14:0,63,861	0/0:39,0:39:99:0,111,1615	0/0:23,0:23:62.78:0,63,863	0/0:26,0:26:72.22:0,72,1046	0/0:41,0:41:99:0,108,1565	0/0:20,0:20:57.17:0,57,827	0/0:28,0:28:60.19:0,60,879	0/0:26,0:26:69.21:0,69,993	0/0:27,0:27:66.07:0,66,923	0/0:18,0:18:48.10:0,48,635	1/1:0,14:14:42.13:495,42,0	1/1:0,35:35:99:1133,99,0	1/1:0,13:13:29.95:344,30,0	0/0:16,0:16:48.14:0,48,679	0/0:16,0:16:39.13:0,39,555	0/0:15,0:15:35.91:0,36,533	0/0:23,0:23:60.20:0,60,883	0/0:26,0:26:78.26:0,78,1114	1/1:1,34:34:96.27:1118,96,0	0/0:5,0:5:12.02:0,12,162
chr10	50554896	.	TG	T	1857.25	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=7.056;DP=562;FS=0.000;HRun=1;HaplotypeScore=56.8002;InbreedingCoeff=0.9770;MQ=76.25;MQ0=0;MQRankSum=-1.972;QD=31.48;ReadPosRankSum=1.066;VQSLOD=3.2292;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:75.19:0,75,1078	0/0:10,0:10:27.07:0,27,388	0/0:21,0:21:60.06:0,60,755	0/0:7,0:7:9.05:0,9,234	0/0:34,0:34:99:0,99,1448	0/0:16,0:16:48.15:0,48,712	0/0:20,0:20:60.20:0,60,918	0/0:33,0:33:99:0,99,1400	0/0:16,0:16:45.12:0,45,637	0/0:39,0:39:99:0,117,1705	0/0:21,0:21:63.18:0,63,914	1/1:0,15:15:39.13:543,39,0	1/1:0,21:21:45.15:629,45,0	0/0:24,0:24:72.23:0,72,1079	0/0:25,0:25:75.25:0,75,1140	0/0:23,0:23:69.20:0,69,1011	0/0:22,0:22:66.19:0,66,947	0/0:15,0:15:45.15:0,45,671	0/0:18,0:18:54.13:0,54,763	0/0:24,0:24:69.07:0,69,911	0/0:10,0:10:30.10:0,30,459	1/1:0,4:4:12:146,12,0	1/1:0,11:11:33.11:460,33,0	1/1:0,8:8:18.06:252,18,0	0/0:27,0:27:71.85:0,72,1185	0/0:26,0:26:75.25:0,75,1149	0/0:33,0:33:96.32:0,96,1445	0/0:11,0:11:33.11:0,33,505
chr10	50555557	.	AATAT	A	4251.87	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=15.174;DP=537;FS=9.084;HRun=0;HaplotypeScore=106.3815;InbreedingCoeff=0.9691;MQ=65.86;MQ0=1;MQRankSum=-12.219;QD=33.75;ReadPosRankSum=-2.874;VQSLOD=3.4266;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:39.13:0,39,1075	0/0:7,0:7:21.07:0,21,588	0/0:8,0:7:17.94:0,18,340	0/0:8,0:7:21.07:0,21,488	0/0:33,0:33:93.30:0,93,2491	0/0:19,0:19:57.20:0,57,1593	0/0:9,0:9:27.08:0,27,693	1/1:9,24:33:75.20:1065,75,0	0/0:20,0:20:57.18:0,57,1536	0/0:22,0:22:63.21:0,63,1699	0/0:28,0:28:81.25:0,81,2102	0/0:13,0:13:39.13:0,39,1048	0/0:24,0:24:72.23:0,72,1937	0/0:23,0:23:66.23:0,66,1835	0/0:21,0:21:63.22:0,63,1709	0/0:12,0:12:36.12:0,36,984	0/0:11,0:11:27.06:0,27,596	0/0:29,0:27:81.24:0,81,2090	1/1:3,11:14:39.11:533,39,0	1/1:8,40:48:99:1684,122,0	1/1:5,1:5:5.84:39,6,0	0/0:12,0:12:36.08:0,36,830	0/0:14,0:14:42.13:0,42,1079	0/0:7,0:7:21.07:0,21,548	0/0:33,0:33:99:0,99,2666	0/0:27,0:27:78.23:0,78,1931	1/1:4,21:25:60.31:931,60,0	0/0:16,0:16:48.16:0,48,1342
chr10	50555558	.	ATATACATT	A	2117.73	PASS	AB=0.800;AC=9;AF=0.161;AN=56;BaseQRankSum=14.650;DP=523;FS=6.578;HRun=0;HaplotypeScore=154.9474;InbreedingCoeff=0.8769;MQ=66.45;MQ0=1;MQRankSum=-11.479;QD=18.74;ReadPosRankSum=-1.948;VQSLOD=2.4338;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:39.13:0,39,1693	0/0:7,0:7:21.07:0,21,973	0/0:8,0:7:17.99:0,18,443	0/0:8,0:7:21.07:0,21,768	0/0:31,0:31:93.32:0,93,4104	0/0:19,0:19:57.20:0,57,2569	0/0:9,0:9:27.09:0,27,1155	1/1:24,2:26:73.99:555,74,0	0/0:19,0:19:57.20:0,57,2538	0/0:21,0:21:63.22:0,63,2813	0/0:29,0:29:84.29:0,84,3475	0/0:13,0:13:39.13:0,39,1775	0/0:24,0:24:72.25:0,72,3112	0/0:22,0:22:66.23:0,66,2998	0/0:22,0:22:66.23:0,66,2783	0/0:13,0:13:39.13:0,39,1600	0/0:11,0:11:30.07:0,30,1044	0/0:30,0:28:87.26:0,87,3520	1/1:11,2:13:38.27:356,38,0	1/1:46,0:46:32.80:973,33,0	0/1:3,0:3:6.26:46,0,6	0/0:12,0:12:36.12:0,36,1374	0/0:14,0:14:42.14:0,42,1742	0/0:7,0:7:21.07:0,21,878	0/0:34,0:34:99:0,102,4437	0/0:26,0:26:78.25:0,78,3112	1/1:24,0:24:10.06:350,10,0	0/0:16,0:16:48.16:0,48,2208
chr10	50555563	.	CA	C	2390.58	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=14.999;DP=516;FS=16.031;HRun=1;HaplotypeScore=78.6041;InbreedingCoeff=0.9510;MQ=66.79;MQ0=2;MQRankSum=-13.262;QD=20.43;ReadPosRankSum=-2.808;VQSLOD=2.0683;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:39.11:0,39,596	0/0:7,0:7:21.07:0,21,335	0/0:9,0:8:17.84:0,18,217	0/0:8,0:7:18.06:0,18,288	0/0:30,0:30:90.29:0,90,1415	0/0:20,0:20:60.20:0,60,956	0/0:9,0:9:27.09:0,27,431	1/1:6,25:30:81.37:706,81,0	0/0:18,0:18:54.18:0,54,863	0/0:23,0:23:69.24:0,69,1103	0/0:28,0:28:81.28:0,81,1284	0/0:14,0:14:42.14:0,42,671	0/0:24,0:24:72.22:0,72,1105	0/0:23,0:23:69.21:0,69,1057	0/0:21,0:21:63.19:0,63,961	0/0:16,0:16:48.14:0,48,716	0/0:9,0:9:21.07:0,21,334	0/0:26,0:26:78.22:0,78,1217	1/1:2,11:13:33.89:285,34,0	1/1:6,40:46:99:1019,126,0	1/1:2,1:2:2.96:19,3,0	0/0:9,0:9:27.09:0,27,432	0/0:12,0:12:36.12:0,36,575	0/0:7,0:7:21.07:0,21,336	0/0:32,0:32:96.33:0,96,1534	0/0:23,0:23:69.23:0,69,1082	1/1:3,21:24:64.71:529,65,0	0/0:17,0:17:51.17:0,51,813
chr10	50555659	.	AC	A	4007.38	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=10.956;DP=541;FS=14.182;HRun=2;HaplotypeScore=55.7446;InbreedingCoeff=0.9934;MQ=84.41;MQ0=0;MQRankSum=-1.721;QD=35.15;ReadPosRankSum=-2.397;VQSLOD=1.5628;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:54.14:0,54,774	0/0:9,0:9:27.09:0,27,399	0/0:19,0:19:38.30:0,38,627	0/0:18,1:19:23.42:0,23,582	0/0:26,0:26:78.26:0,78,1150	0/0:31,0:31:90.27:0,90,1292	0/0:15,0:15:42.07:0,42,535	1/1:0,26:26:75.19:938,75,0	0/0:19,0:19:57.18:0,57,824	0/0:25,0:25:66.22:0,66,977	0/0:19,0:19:57.16:0,57,792	0/0:19,0:19:57.19:0,57,843	0/0:21,0:21:63.21:0,63,929	0/0:22,0:22:66.22:0,66,975	0/0:22,0:22:63.18:0,63,892	0/0:24,0:24:69.22:0,69,996	0/0:6,0:6:18.06:0,18,262	0/0:18,0:18:54.09:0,54,725	1/1:0,20:20:60.18:763,60,0	1/1:1,18:19:51.10:640,51,0	1/1:0,6:6:15.05:190,15,0	0/0:11,0:11:33.10:0,33,467	0/0:21,0:21:63.20:0,63,909	0/0:11,0:10:33.10:0,33,463	0/0:17,0:17:51.15:0,51,717	0/0:23,0:23:69.23:0,69,1019	1/1:0,43:43:99:1477,114,0	0/0:11,0:11:29.77:0,30,443
chr10	50556599	.	A	ATTTT	3933.40	PASS	AB=0.669;AC=16;AF=0.286;AN=56;BaseQRankSum=-6.160;DP=629;FS=0.000;HRun=10;HaplotypeScore=124.2876;InbreedingCoeff=0.6756;MQ=76.45;MQ0=0;MQRankSum=-2.257;QD=16.67;ReadPosRankSum=-0.360;VQSLOD=0.8791;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:4,0:33:2.24:2,0,37	1/1:2,0:11:26.92:298,27,0	0/0:16,0:16:36.04:0,36,465	0/1:16,0:16:11.86:12,0,206	0/0:36,0:36:96.22:0,96,1338	1/1:6,16:24:39.13:892,39,0	1/1:13,11:28:36.12:790,36,0	0/0:7,0:27:3.62:0,4,70	1/1:9,14:27:29.73:693,30,0	0/0:20,0:20:48.08:0,48,679	0/0:34,0:34:90.17:0,90,1266	0/0:30,0:31:73.33:0,73,1021	0/0:17,0:18:51.15:0,51,703	0/0:27,0:27:69.10:0,69,976	1/1:5,0:24:42.08:520,42,0	1/1:9,11:22:31.92:683,32,0	0/0:25,0:26:72.14:0,72,981	0/0:16,0:16:39.07:0,39,531	0/1:6,0:18:3.61:4,0,55	0/1:5,0:32:25.93:40,0,26	0/0:4,0:21:21.10:0,21,52	0/0:19,0:20:54.10:0,54,739	0/0:27,0:29:71.66:0,72,981	0/0:11,0:11:30.09:0,30,425	0/0:23,0:24:55.32:0,55,742	0/0:12,0:12:33.09:0,33,466	0/0:3,0:20:16.14:0,16,40	0/0:4,0:5:11.98:0,12,151
chr10	50557605	.	A	AT	8579.31	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-5.431;DP=574;FS=4.027;HRun=9;HaplotypeScore=65.4498;InbreedingCoeff=0.9848;MQ=77.41;MQ0=1;MQRankSum=-2.606;QD=25.09;ReadPosRankSum=-2.190;VQSLOD=4.9101;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:15:34.25:182,34,0	1/1:1,0:12:28.41:142,28,0	0/0:16,0:14:10.86:0,11,167	0/0:17,0:19:12.55:0,13,171	0/0:31,0:31:83.96:0,84,725	1/1:5,26:31:84.23:929,84,0	1/1:3,15:18:42.11:464,42,0	1/1:10,13:23:16.03:393,16,0	1/1:4,10:14:38.96:404,39,0	0/0:26,0:26:59.98:0,60,521	0/0:24,0:24:59.96:0,60,518	1/1:3,10:13:33.08:357,33,0	1/1:5,20:25:63.16:687,63,0	0/0:14,0:14:32.98:0,33,286	1/1:5,0:22:56.93:294,57,0	1/1:2,20:22:63.17:697,63,0	0/0:27,0:27:68.98:0,69,599	0/0:20,0:20:47.99:0,48,417	1/1:6,12:20:47.80:493,48,0	1/1:5,22:27:72.19:789,72,0	1/1:4,6:10:21.05:224,21,0	1/1:7,20:27:69.18:755,69,0	1/1:6,20:26:67.72:727,68,0	1/1:1,7:8:21.06:232,21,0	0/0:21,0:21:59.98:0,60,520	0/0:27,0:27:71.98:0,72,625	1/1:5,24:29:76.04:809,76,0	0/0:7,0:7:14.96:0,15,124
chr10	50557690	.	C	CAG	19741.12	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-14.125;DP=618;FS=0.000;HRun=0;HaplotypeScore=73.8045;InbreedingCoeff=0.9932;MQ=79.17;MQ0=0;MQRankSum=-2.712;QD=50.88;ReadPosRankSum=-0.837;VQSLOD=5.3543;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,22:23:69.24:1291,69,0	1/1:1,5:6:18.06:334,18,0	0/0:14,0:14:42.12:0,42,572	0/0:20,0:19:42.06:0,42,568	0/0:33,0:33:90.29:0,90,1304	1/1:2,27:29:81.23:1473,81,0	1/1:0,19:19:51.17:955,51,0	1/1:1,22:23:66.22:1206,66,0	1/1:3,15:19:51.16:912,51,0	0/0:30,0:30:87.29:0,87,1264	0/0:24,0:24:69.23:0,69,1016	1/1:1,20:22:63.22:1179,63,0	1/1:6,27:33:84.29:1572,84,0	0/0:24,0:24:72.24:0,72,1052	1/1:5,30:35:99:1849,99,0	1/1:2,20:22:66.18:1200,66,0	0/0:26,0:26:75.25:0,75,1104	0/0:8,0:8:21.07:0,21,309	1/1:1,11:12:36.11:644,36,0	1/1:2,35:37:99:1823,99,0	1/1:0,11:11:33.11:618,33,0	1/1:1,25:26:69.24:1292,69,0	1/1:3,31:34:83.68:1541,84,0	1/1:0,8:8:21.07:393,21,0	0/0:24,0:24:72.24:0,72,1058	0/0:23,0:23:69.23:0,69,1014	1/1:3,26:29:78.17:1460,78,0	0/0:4,0:4:12.04:0,12,177
chr10	50559063	.	GAGTAAT	G	2260.22	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.333;DP=649;FS=3.174;HRun=0;HaplotypeScore=139.7449;InbreedingCoeff=0.9833;MQ=82.74;MQ0=0;MQRankSum=-9.663;QD=52.56;ReadPosRankSum=-0.628;VQSLOD=3.3950;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:66.23:0,66,2315	1/1:0,8:8:24.04:523,24,0	0/0:20,0:20:54.18:0,54,1668	0/0:23,0:23:60.21:0,60,1807	0/0:32,0:32:96.33:0,96,3371	0/0:34,0:34:99:0,99,3420	0/0:24,0:24:72.23:0,72,2455	0/0:33,0:33:93.31:0,93,3080	0/0:13,0:13:39.12:0,39,1306	0/0:18,0:18:48.16:0,48,1720	0/0:19,0:19:57.18:0,57,1916	0/0:31,0:31:93.32:0,93,3232	0/0:18,0:18:54.19:0,54,1907	0/0:27,0:27:81.28:0,81,2801	1/1:3,32:35:78.27:1858,78,0	0/0:33,0:33:93.32:0,93,3264	0/0:26,0:26:75.26:0,75,2651	0/0:20,0:20:60.16:0,60,2001	0/0:21,0:21:60.18:0,60,1952	0/0:22,0:22:66.23:0,66,2251	0/0:21,0:21:63.22:0,63,2191	0/0:16,0:16:48.16:0,48,1727	0/0:26,0:26:72.23:0,72,2488	0/0:28,0:28:81.28:0,81,2920	0/0:15,0:15:42.14:0,42,1458	0/0:25,0:25:69.24:0,69,2442	0/0:33,0:33:93.31:0,93,3248	0/0:4,0:4:12.04:0,12,432
chr10	50560946	.	ATG	A	1717.42	PASS	AB=0.995;AC=17;AF=0.304;AN=56;BaseQRankSum=5.484;DP=761;FS=2.943;HRun=0;HaplotypeScore=128.9161;InbreedingCoeff=0.6318;MQ=67.65;MQ0=10;MQRankSum=0.230;QD=6.00;ReadPosRankSum=-0.750;VQSLOD=3.2887;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,10:25:29.88:361,30,0	0/1:7,0:7:0.67:1,0,165	0/0:31,0:18:27.08:0,27,396	0/0:35,0:22:24.97:0,25,376	0/0:23,0:23:45.12:0,45,651	1/1:27,5:32:50.48:522,50,0	1/1:3,17:20:2.74:34,3,0	0/0:35,0:31:63.03:0,63,863	1/1:7,24:31:20.70:248,21,0	0/0:34,0:33:73.04:0,73,964	0/0:15,0:17:4.73:0,5,460	0/1:26,0:26:0.43:6,0,0	0/1:40,1:41:13.65:36,0,14	0/0:26,0:26:61.38:0,61,813	0/0:35,0:35:77.64:0,78,927	1/1:22,3:25:54.12:617,54,0	0/0:25,0:25:62.95:0,63,808	0/0:32,0:32:51.16:0,51,1085	0/0:27,0:27:59.28:0,59,818	0/0:26,0:26:49.89:0,50,622	0/0:45,0:44:72.20:0,72,1021	0/1:23,0:23:2.85:3,0,53	1/1:24,0:24:12.32:50,12,0	0/1:32,0:32:19.56:21,0,20	0/0:16,0:16:41.03:0,41,543	0/0:34,0:34:80.82:0,81,1114	0/0:19,0:18:44.30:0,44,545	0/0:15,0:15:36.07:0,36,473
chr10	50560958	.	G	GTA	802.03	PASS	AB=0.650;AC=10;AF=0.179;AN=56;BaseQRankSum=6.189;DP=774;FS=2.532;HRun=0;HaplotypeScore=136.7562;InbreedingCoeff=0.1598;MQ=59.42;MQ0=12;MQRankSum=2.131;QD=3.41;ReadPosRankSum=2.690;VQSLOD=2.7627;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:25:22.65:108,23,0	0/0:9,0:9:24.02:0,24,285	0/0:23,0:10:27.08:0,27,377	0/0:26,0:13:23.57:0,24,369	0/0:24,0:24:51.02:0,51,645	0/1:35,0:35:20.92:96,0,21	0/0:22,0:22:6.79:0,7,45	0/0:35,0:31:86.45:0,86,989	0/0:28,0:28:1.18:0,1,63	0/0:31,0:30:81.64:0,82,1040	0/0:19,0:19:8.03:0,8,437	0/1:5,20:26:22.35:49,0,22	0/1:9,28:39:29.77:111,0,30	0/0:26,0:26:72.20:0,72,1012	0/0:36,0:36:81.03:0,81,1146	1/1:23,0:23:2.13:174,2,0	0/0:29,0:29:84.01:0,84,1035	0/0:39,0:39:87.56:0,88,1295	0/0:31,0:30:77.92:0,78,973	0/0:27,0:27:51.16:0,51,725	0/0:47,0:45:72.23:0,72,1057	0/1:9,17:26:46.60:47,0,64	0/1:7,18:25:20.70:161,0,21	0/1:10,26:36:26.15:205,0,26	0/0:19,0:19:48.09:0,48,639	0/0:33,0:33:92.23:0,92,1132	0/0:19,0:18:45.15:0,45,661	0/0:15,0:15:36.08:0,36,462
chr10	50560962	.	ATGTGTG	A	1077.73	PASS	AB=0.869;AC=16;AF=0.286;AN=56;BaseQRankSum=4.378;DP=778;FS=1.471;HRun=0;HaplotypeScore=176.8275;InbreedingCoeff=0.6705;MQ=60.83;MQ0=15;MQRankSum=-4.957;QD=3.81;ReadPosRankSum=-0.386;VQSLOD=2.7292;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:32:2.74:40,3,0	0/0:11,0:11:17.34:0,17,183	0/0:27,0:12:15.01:0,15,144	0/0:31,0:15:11.16:0,11,96	0/0:16,0:23:21.04:0,21,425	1/1:22,0:38:1.93:149,2,0	1/1:23,0:26:7.42:75,7,0	0/1:37,0:33:52.72:112,0,53	1/1:22,0:28:20.52:294,21,0	0/0:25,0:31:47.98:0,48,1044	0/0:16,0:17:21.07:0,21,555	0/0:23,0:23:12.03:0,12,257	0/0:39,0:39:19.67:0,20,431	0/0:26,0:26:33.09:0,33,646	0/0:21,0:32:29.70:0,30,396	0/0:19,0:22:2.71:0,3,91	0/0:26,0:26:46.78:0,47,1030	0/0:34,0:39:57.15:0,57,1203	1/1:28,0:29:8.77:123,9,0	1/1:16,9:27:12.04:227,12,0	0/1:29,15:43:5.96:6,0,40	0/0:27,0:27:8.97:0,9,262	0/0:23,0:23:14.16:0,14,360	0/0:31,0:31:18.89:0,19,468	0/0:15,0:19:36.11:0,36,847	0/0:25,0:33:56.98:0,57,1056	1/1:11,8:19:12.04:227,12,0	0/0:8,0:13:15.05:0,15,393
chr10	50561352	.	TA	T	1745.85	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=4.132;DP=598;FS=2.055;HRun=10;HaplotypeScore=78.8067;InbreedingCoeff=0.9657;MQ=70.01;MQ0=0;MQRankSum=-0.766;QD=17.63;ReadPosRankSum=3.283;VQSLOD=4.3865;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:66.08:0,66,687	0/0:9,0:10:29.89:0,30,301	0/0:11,0:11:8.16:0,8,206	0/0:12,0:12:8.75:0,9,99	0/0:23,0:23:63.17:0,63,697	0/0:32,0:32:90.23:0,90,988	0/0:15,0:15:36.10:0,36,398	0/0:11,0:32:74.73:0,75,449	0/0:21,1:22:28.14:0,28,538	0/0:20,0:19:51.14:0,51,564	0/0:25,0:25:63.17:0,63,697	1/1:5,17:22:44.98:391,45,0	1/1:3,23:26:62.98:547,63,0	0/0:22,0:22:51.12:0,51,555	0/0:22,1:23:40.07:0,40,636	0/0:24,1:25:43.14:0,43,697	0/0:16,0:16:42.08:0,42,452	0/0:23,0:23:60.13:0,60,651	0/0:10,0:17:28.53:0,29,147	0/0:7,0:22:39.93:0,40,212	0/0:3,0:16:34.09:0,34,170	1/1:2,17:19:47.94:409,48,0	1/1:4,20:24:50.98:443,51,0	1/1:2,6:8:14.98:130,15,0	0/0:29,0:30:81:0,81,856	0/0:33,0:33:81.20:0,81,885	0/0:9,0:31:83.14:0,83,445	0/0:13,0:13:30.08:0,30,332
chr10	50565855	.	ATCAGC	A	14691.02	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=14.354;DP=782;FS=5.192;HRun=0;HaplotypeScore=178.3700;InbreedingCoeff=0.9975;MQ=81.05;MQ0=0;MQRankSum=-16.655;QD=52.66;ReadPosRankSum=0.223;VQSLOD=4.5309;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,35:44:99:2165,108,0	0/0:13,0:13:39.13:0,39,1222	0/0:21,0:21:60.19:0,60,1616	0/0:33,0:33:90.26:0,90,2522	0/0:31,0:31:90.27:0,90,2580	0/0:22,0:22:66.23:0,66,2022	0/0:32,0:32:90.29:0,90,2700	1/1:4,21:25:66.23:1397,66,0	0/0:29,0:29:78.27:0,78,2442	0/0:35,0:35:96.33:0,96,2951	0/0:27,0:27:78.25:0,78,2374	1/1:4,26:30:87.30:1822,87,0	1/1:6,22:28:72.23:1492,72,0	0/0:40,0:40:99:0,117,3662	0/0:55,0:55:99:0,157,4764	0/0:47,0:47:99:0,132,4087	0/0:25,0:25:72.25:0,72,2248	0/0:30,0:30:87.30:0,87,2600	1/1:3,8:11:33.09:616,33,0	1/1:4,31:35:99:2075,102,0	1/1:9,10:19:27.08:526,27,0	1/1:6,19:25:57.20:1200,57,0	1/1:1,20:21:57.20:1203,57,0	1/1:2,17:19:42.60:854,43,0	0/0:30,0:30:87.28:0,87,2605	0/0:27,0:27:81.26:0,81,2392	1/1:1,21:22:63.22:1341,63,0	0/0:6,0:6:15.05:0,15,470
chr10	50565902	.	AG	A	14443.58	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=19.604;DP=867;FS=11.937;HRun=2;HaplotypeScore=125.3368;InbreedingCoeff=0.9994;MQ=84.21;MQ0=0;MQRankSum=-12.405;QD=34.39;ReadPosRankSum=1.069;VQSLOD=3.1121;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,46:46:99:1400,108,0	1/1:0,8:8:24.08:312,24,0	0/0:30,0:30:87.29:0,87,1272	0/0:30,0:30:84.28:0,84,1228	0/0:27,0:27:78.26:0,78,1169	0/0:15,0:15:45.11:0,45,649	0/0:35,0:35:99:0,99,1465	1/1:2,29:31:87.27:1113,87,0	0/0:33,0:33:96.32:0,96,1420	0/0:31,0:31:93.32:0,93,1394	0/0:31,0:31:93.29:0,93,1355	1/1:0,34:34:96.31:1244,96,0	1/1:2,44:46:99:1518,117,0	0/0:40,0:40:99:0,120,1791	1/1:0,57:57:99:2141,166,0	0/0:50,0:50:99:0,150,2224	0/0:25,0:25:69.23:0,69,1034	0/0:32,0:32:90.30:0,90,1349	1/1:0,22:22:66.21:844,66,0	1/1:0,39:39:99:1323,102,0	1/1:0,15:15:33.11:428,33,0	1/1:2,23:25:69.22:895,69,0	1/1:0,25:25:66.21:856,66,0	1/1:0,25:25:54.18:700,54,0	0/0:31,0:31:93.32:0,93,1393	0/0:29,0:29:84.28:0,84,1256	1/1:0,47:47:99:1669,127,0	0/0:8,0:8:24.08:0,24,360
chr10	50566025	.	CAG	C	5236.31	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=18.431;DP=653;FS=15.657;HRun=0;HaplotypeScore=176.6965;InbreedingCoeff=0.9911;MQ=86.93;MQ0=0;MQRankSum=-13.406;QD=18.44;ReadPosRankSum=2.803;VQSLOD=4.2859;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,17:28:68.34:452,68,0	1/1:6,8:14:24.10:264,24,0	0/0:30,0:30:70.83:0,71,1328	0/0:26,0:26:29.02:0,29,1199	0/0:30,0:30:90.30:0,90,1793	0/0:20,0:20:57.20:0,57,1157	0/0:30,0:30:87.28:0,87,1729	1/1:2,13:15:44.49:305,44,0	0/0:26,0:26:72.25:0,72,1461	0/0:21,0:21:63.22:0,63,1278	0/0:13,0:12:36.12:0,36,731	1/1:11,12:23:65.37:563,65,0	1/1:15,19:34:86.86:659,87,0	0/0:40,0:40:99:0,120,2433	1/1:15,24:39:98.24:800,98,0	0/0:41,0:41:99:0,117,2315	0/0:21,0:21:63.22:0,63,1280	0/0:22,0:22:66.23:0,66,1341	1/1:4,7:11:21.38:258,21,0	1/1:13,13:26:71.40:603,71,0	1/1:12,8:20:44.70:297,45,0	1/1:3,15:18:36.47:220,36,0	1/1:1,18:19:41.52:177,42,0	1/1:11,9:20:32.80:284,33,0	0/0:17,0:17:51.18:0,51,1036	0/0:29,0:29:87.29:0,87,1723	1/1:7,10:17:46.83:353,47,0	0/0:3,0:3:9.03:0,9,183
chr10	50566029	.	A	ATG	9006.83	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=17.974;DP=709;FS=12.750;HRun=0;HaplotypeScore=203.3975;InbreedingCoeff=0.9919;MQ=85.91;MQ0=0;MQRankSum=-13.248;QD=26.97;ReadPosRankSum=1.511;VQSLOD=5.1361;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:17,17:34:77.77:790,78,0	1/1:6,8:14:36.70:459,37,0	0/0:34,0:34:73.56:0,74,1111	0/0:26,0:26:68.56:0,69,1011	0/0:30,0:30:87.28:0,87,1393	0/0:21,0:21:60.19:0,60,950	0/0:28,0:28:81.01:0,81,1283	1/1:6,13:19:57.15:673,57,0	0/0:25,0:25:69.24:0,69,1124	0/0:22,0:22:66.23:0,66,1072	0/0:12,0:12:36.12:0,36,587	1/1:14,12:26:68.97:817,69,0	1/1:17,19:36:99:1070,100,0	0/0:41,0:41:99:0,123,2007	1/1:25,24:49:99:1521,131,0	0/0:37,0:37:99:0,105,1691	0/0:23,0:23:69.21:0,69,1093	0/0:22,0:22:66.19:0,66,1041	1/1:6,7:13:30.55:392,31,0	1/1:20,13:33:77.99:904,78,0	1/1:14,8:22:50.70:496,51,0	1/1:8,15:23:41.76:387,42,0	1/1:4,18:22:50.49:399,50,0	1/1:15,10:25:44.81:487,45,0	0/0:19,0:19:57.18:0,57,901	0/0:30,0:30:87.28:0,87,1374	1/1:8,10:18:53.88:613,54,0	0/0:5,0:5:9.03:0,9,147
chr10	50566073	.	A	ATAT	28117.51	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=4.833;DP=700;FS=14.465;HRun=0;HaplotypeScore=149.1785;InbreedingCoeff=0.9988;MQ=87.17;MQ0=0;MQRankSum=-16.973;QD=64.64;ReadPosRankSum=-2.244;VQSLOD=4.0652;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,31:37:99:2433,99,0	1/1:0,14:14:42.14:1031,42,0	0/0:27,0:27:81.01:0,81,1349	0/0:35,0:34:75.92:0,76,1648	0/0:28,0:28:81.28:0,81,1509	1/1:1,14:17:42.14:1034,42,0	1/1:7,24:31:81.28:1975,81,0	1/1:5,14:20:57.18:1344,57,0	1/1:1,25:27:69.24:1700,69,0	0/0:22,0:22:66.23:0,66,1231	0/0:17,0:17:51.17:0,51,950	1/1:4,30:34:96.33:2359,96,0	1/1:1,20:22:63.22:1549,63,0	0/0:35,0:35:99:0,102,1856	1/1:2,33:36:96.33:2351,96,0	1/1:0,27:30:78.27:1921,78,0	0/0:24,0:24:72.25:0,72,1342	0/0:23,0:23:66.23:0,66,1221	1/1:2,17:20:60.20:1429,60,0	1/1:0,27:28:81.28:1989,81,0	1/1:3,20:23:51.18:1254,51,0	1/1:2,20:22:63.22:1547,63,0	1/1:5,19:25:57.20:1400,57,0	1/1:1,23:24:41.89:1030,42,0	0/0:21,0:21:60.19:0,60,1088	0/0:27,0:27:78.27:0,78,1455	1/1:0,25:25:72.25:1771,72,0	0/0:6,0:6:18.06:0,18,336
chr10	50568517	.	GTCTATTCTATTCTATTCTAT	G	524.21	PASS	AB=0.932;AC=8;AF=0.160;AN=50;BaseQRankSum=-0.440;DP=621;FS=5.895;HRun=0;HaplotypeScore=298.8308;InbreedingCoeff=0.4994;MQ=78.85;MQ0=37;MQRankSum=-3.818;QD=5.35;ReadPosRankSum=0.156;VQSLOD=1.6207;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:30:95.62:103,0,96	./.	0/0:52,0:20:2.80:0,3,13	0/0:117,0:53:11.32:0,11,77	0/0:21,0:21:30.10:0,30,1871	0/0:14,0:13:33.09:0,33,1439	0/0:13,0:12:12.04:0,12,426	./.	0/0:17,0:17:27.08:0,27,1567	0/0:18,0:18:9.50:0,10,578	0/0:18,0:18:12.04:0,12,540	0/0:18,0:18:12.04:0,12,716	0/0:19,0:18:15.05:0,15,761	0/0:22,0:22:15.05:0,15,783	./.	0/0:18,0:18:36.06:0,36,1810	0/0:19,0:19:18.06:0,18,999	0/0:17,0:17:23.29:0,23,1418	1/1:21,0:17:6.02:230,6,0	0/1:15,2:16:2.51:89,0,3	1/1:18,0:17:5.59:119,6,0	0/0:11,0:11:3.01:0,3,145	0/0:10,0:10:12.04:0,12,453	0/0:19,0:19:27.46:0,27,1503	0/0:16,0:15:9.03:0,9,489	0/0:20,0:18:18.05:0,18,739	1/1:8,3:10:3:109,3,0	0/0:17,0:17:24.06:0,24,988
chr10	50568548	.	T	TTTC	202.56	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=3.359;DP=491;FS=1.503;HRun=0;HaplotypeScore=84.6234;InbreedingCoeff=0.8545;MQ=56.55;MQ0=57;MQRankSum=-2.664;QD=33.76;ReadPosRankSum=-0.547;VQSLOD=3.6743;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:65:0,65,1103	1/1:2,2:4:11.95:181,12,0	0/0:23,0:3:8.62:0,9,109	0/0:57,0:18:13.94:0,14,184	0/0:32,0:28:78.25:0,78,1417	0/0:24,0:22:66.22:0,66,1190	0/0:12,0:12:36.11:0,36,633	0/0:21,0:16:45.10:0,45,684	0/0:10,0:10:30.10:0,30,559	0/0:22,0:17:51.17:0,51,921	0/0:17,0:11:30.10:0,30,559	0/0:14,0:14:40.66:0,41,692	0/0:13,0:12:33.04:0,33,553	0/0:18,0:18:54.14:0,54,912	1/1:0,2:2:6.02:127,6,0	0/0:19,0:19:51.16:0,51,919	0/0:16,0:16:48.15:0,48,863	0/0:19,0:18:51.17:0,51,950	0/0:12,0:9:24.03:0,24,381	0/0:18,0:16:39.95:0,40,612	0/0:15,0:14:30.09:0,30,527	0/0:6,0:4:9.02:0,9,137	0/0:9,0:8:24.06:0,24,387	0/0:16,0:16:42.10:0,42,695	0/0:20,0:17:45.15:0,45,823	0/0:15,0:12:36.12:0,36,648	0/0:17,0:15:40.83:0,41,621	0/0:14,0:14:42.09:0,42,745
chr10	50568568	.	T	TTTC	125.94	PASS	AB=0.847;AC=3;AF=0.054;AN=56;BaseQRankSum=3.803;DP=485;FS=6.217;HRun=0;HaplotypeScore=73.4995;InbreedingCoeff=-0.0621;MQ=60.83;MQ0=42;MQRankSum=-3.426;QD=3.23;ReadPosRankSum=-0.523;VQSLOD=0.9629;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:23:24.22:0,24,887	0/0:2,0:2:5.95:0,6,74	0/0:14,0:7:14.95:0,15,155	0/0:40,0:11:22.50:0,22,381	0/0:38,0:34:96.33:0,96,1787	0/0:24,0:22:66.20:0,66,1162	0/0:14,0:14:39.13:0,39,707	0/0:20,0:15:45.15:0,45,838	0/0:17,0:17:51.16:0,51,918	0/0:23,0:19:51.17:0,51,920	0/0:20,0:15:42.13:0,42,744	0/0:17,0:17:48.11:0,48,851	0/0:15,0:14:39.13:0,39,717	0/0:13,0:13:39.12:0,39,696	0/0:9,0:9:26.80:0,27,309	0/0:18,0:18:54.12:0,54,938	0/0:15,0:15:44.91:0,45,761	0/0:16,0:15:42.14:0,42,783	0/1:7,2:7:99:126,0,226	0/0:18,0:17:45.02:0,45,736	0/1:8,5:13:69.73:70,0,312	0/0:9,0:6:15.04:0,15,251	0/0:12,0:11:33.10:0,33,578	0/0:13,0:13:39.13:0,39,701	0/0:24,0:22:54.15:0,54,944	0/0:20,0:18:54.17:0,54,922	0/1:17,0:15:30.62:31,0,643	0/0:11,0:11:33.08:0,33,553
chr10	50569194	.	CTTT	C	1551.03	PASS	AC=10;AF=0.313;AN=32;BaseQRankSum=4.551;DP=320;FS=31.186;HRun=6;HaplotypeScore=93.9549;InbreedingCoeff=0.9609;MQ=69.15;MQ0=8;MQRankSum=-5.378;QD=29.26;ReadPosRankSum=1.712;VQSLOD=0.2833;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:39,0:13:27.68:0,28,345	0/0:34,0:16:15.39:0,15,230	0/0:30,0:30:73.98:0,74,1240	./.	./.	./.	./.	0/0:18,0:18:49.80:0,50,833	0/0:19,0:19:21.62:0,22,962	1/1:6,8:14:39.12:555,39,0	1/1:9,6:15:36.10:498,36,0	0/0:15,0:14:39.13:0,39,779	./.	./.	0/0:30,0:30:83.73:0,84,1536	0/0:34,0:31:74.95:0,75,1346	./.	./.	./.	1/1:1,1:2:5.80:43,6,0	1/1:8,4:12:23.80:350,24,0	1/1:5,5:10:17.98:249,18,0	0/0:20,0:20:60.13:0,60,1011	0/0:16,0:16:39.05:0,39,647	./.	0/0:12,0:12:32.94:0,33,478
chr10	50569201	.	CTTT	C	491.70	PASS	AC=10;AF=0.313;AN=32;BaseQRankSum=7.257;DP=332;FS=17.659;HRun=16;HaplotypeScore=99.3559;InbreedingCoeff=0.8525;MQ=65.76;MQ0=12;MQRankSum=-4.639;QD=10.03;ReadPosRankSum=3.284;VQSLOD=-0.6704;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:53,0:15:20.82:0,21,219	0/0:40,0:16:14.59:0,15,103	0/0:23,0:27:58.70:0,59,787	./.	./.	./.	./.	0/0:16,0:17:41.45:0,41,509	0/0:17,0:21:52.81:0,53,706	1/1:6,6:13:23.54:209,24,0	1/1:9,5:14:10.07:150,10,0	0/0:13,0:13:32.97:0,33,452	./.	./.	0/0:23,0:30:72.42:0,72,1008	0/0:28,1:28:68.58:0,69,992	./.	./.	./.	1/1:2,0:2:2.82:18,3,0	1/1:7,3:11:1.19:127,1,0	1/1:4,4:9:14.39:119,14,0	0/0:17,0:19:23.50:0,24,532	0/0:19,0:20:43.54:0,44,510	./.	0/0:10,0:10:18.05:0,18,270
chr10	50569425	.	AC	A	6290.23	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=12.184;DP=410;FS=0.377;HRun=1;HaplotypeScore=73.2900;InbreedingCoeff=0.9890;MQ=71.95;MQ0=0;MQRankSum=-2.936;QD=35.54;ReadPosRankSum=-1.429;VQSLOD=4.2988;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,13:13:27.09:375,27,0	1/1:0,6:6:18.06:250,18,0	0/0:9,0:8:24.05:0,24,304	0/0:11,0:11:25.66:0,26,209	0/0:19,0:19:57.16:0,57,776	1/1:0,13:13:33.11:456,33,0	1/1:0,15:15:36.12:499,36,0	1/1:0,38:38:99:1372,114,0	1/1:0,11:11:33.11:456,33,0	0/0:16,0:16:48.15:0,48,670	0/0:23,0:23:69.18:0,69,928	0/0:13,0:13:36.12:0,36,513	0/0:17,0:17:36.10:0,36,496	0/0:14,0:14:41.97:0,42,559	1/1:0,10:10:15.05:208,15,0	1/1:0,9:9:24.08:333,24,0	0/0:21,0:21:63.18:0,63,863	0/0:20,0:20:60.18:0,60,837	1/1:0,17:17:51.12:643,51,0	1/1:0,28:28:78.17:1038,78,0	1/1:0,10:10:30.10:412,30,0	0/0:4,0:4:12.04:0,12,170	0/0:10,0:10:29.93:0,30,374	0/0:9,0:9:24.08:0,24,343	0/0:18,0:18:54.14:0,54,706	0/0:22,0:22:66.20:0,66,883	1/1:1,6:7:19.61:248,20,0	0/0:7,0:6:18.03:0,18,236
chr10	50569457	.	T	TA	1733.45	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-5.604;DP=400;FS=24.518;HRun=1;HaplotypeScore=64.1274;InbreedingCoeff=0.9354;MQ=70.49;MQ0=0;MQRankSum=-1.714;QD=32.71;ReadPosRankSum=0.525;VQSLOD=1.8632;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:8:18.06:0,18,233	0/0:6,0:6:18.06:0,18,233	0/0:5,0:5:4.69:0,5,77	0/0:8,0:8:11.84:0,12,99	0/0:26,0:26:75.24:0,75,973	0/0:14,0:14:39.09:0,39,487	0/0:11,0:11:21.07:0,21,272	0/0:39,0:39:99:0,117,1483	0/0:8,0:8:15.05:0,15,194	0/0:18,0:18:45.15:0,45,583	0/0:26,0:26:78.24:0,78,999	1/1:0,14:14:36.12:539,36,0	1/1:1,11:12:21.07:314,21,0	0/0:11,0:11:33.09:0,33,413	0/0:10,0:10:12.03:0,12,141	0/0:8,0:8:21.07:0,21,272	0/0:15,0:15:45.15:0,45,584	0/0:28,0:28:78.18:0,78,952	0/0:18,0:18:45.14:0,45,574	0/0:24,0:24:60.15:0,60,725	0/0:8,0:8:21.07:0,21,271	1/1:0,4:4:12.04:180,12,0	1/1:0,13:13:33.07:468,33,0	1/1:0,10:10:27.09:404,27,0	0/0:19,0:19:57.19:0,57,740	0/0:22,0:22:63.18:0,63,791	0/0:9,0:9:24.07:0,24,299	0/0:6,0:6:18.05:0,18,220
chr10	50569547	.	CA	C	5108.11	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=14.326;DP=429;FS=2.205;HRun=3;HaplotypeScore=62.1208;InbreedingCoeff=0.9708;MQ=76.32;MQ0=0;MQRankSum=-3.272;QD=33.39;ReadPosRankSum=-0.967;VQSLOD=4.8118;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,24:24:63.19:755,63,0	1/1:1,1:2:3.01:36,3,0	0/0:9,0:9:20.81:0,21,202	0/0:11,0:11:27.29:0,27,334	0/0:21,0:21:60.19:0,60,848	1/1:0,9:9:27.08:324,27,0	1/1:1,8:9:24.07:288,24,0	1/1:2,31:33:93.29:1115,93,0	1/1:0,9:9:24.07:288,24,0	0/0:23,0:23:66.20:0,66,891	0/0:24,0:24:66.18:0,66,927	0/0:17,0:17:42.14:0,42,605	0/0:19,0:19:51.12:0,51,694	0/0:13,0:13:36.12:0,36,519	1/1:0,8:8:24.07:288,24,0	1/1:0,11:11:33.10:396,33,0	0/0:24,0:24:72.24:0,72,1036	0/0:27,0:27:75.21:0,75,1054	1/1:1,8:9:24.07:288,24,0	1/1:1,15:16:42.13:503,42,0	1/1:0,11:11:33.10:396,33,0	0/0:9,0:9:24.08:0,24,346	0/0:14,0:14:27.09:0,27,388	0/0:17,0:17:48.16:0,48,691	0/0:23,0:23:69.18:0,69,940	0/0:20,0:20:60.20:0,60,864	1/1:0,12:12:36.11:432,36,0	0/0:5,0:5:15.05:0,15,216
chr10	50569620	.	A	AAAGAAAGAAAG	5430.71	PASS	AB=1.000;AC=21;AF=0.389;AN=54;BaseQRankSum=5.001;DP=429;FS=13.852;HRun=0;HaplotypeScore=156.6956;InbreedingCoeff=0.2874;MQ=53.53;MQ0=7;MQRankSum=-4.943;QD=23.41;ReadPosRankSum=-0.282;VQSLOD=3.5419;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:16,0:16:1.40:458,0,1	0/0:10,0:10:23.80:0,24,181	./.	0/0:3,0:2:2.60:0,3,10	0/0:13,0:13:33.11:0,33,898	0/1:10,0:10:5.46:5,0,86	0/1:9,0:9:13.43:17,0,13	0/1:22,0:21:18.41:346,0,18	0/1:9,0:9:52.45:52,0,125	0/0:19,0:19:48.16:0,48,1200	0/0:21,0:21:48.16:0,48,1149	1/1:4,13:18:6.02:332,6,0	1/1:3,13:17:12.04:664,12,0	0/0:19,0:19:45.63:0,46,1337	0/1:16,0:16:99:155,0,111	0/0:19,0:19:6.84:0,7,389	0/0:27,0:27:68.04:0,68,1484	0/0:16,0:16:39.13:0,39,876	0/1:23,0:21:37.01:347,0,37	0/1:22,0:22:9.76:924,0,10	1/1:4,0:4:6.01:62,6,0	1/1:1,9:13:20.98:548,21,0	1/1:2,14:21:32.52:1044,33,0	1/1:17,0:18:21.54:288,22,0	0/0:16,0:16:45.12:0,45,991	0/0:17,0:17:48.15:0,48,1204	0/1:14,0:14:83.13:189,0,83	0/0:8,0:6:12.14:0,12,134
chr10	50569623	.	GA	G	392.48	PASS	AB=0.844;AC=5;AF=0.089;AN=56;BaseQRankSum=3.525;DP=416;FS=7.968;HRun=3;HaplotypeScore=92.9254;InbreedingCoeff=-0.1205;MQ=50.26;MQ0=7;MQRankSum=-5.366;QD=4.51;ReadPosRankSum=1.950;VQSLOD=0.2226;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:28:0,28,408	0/1:3,7:10:56.22:233,0,56	0/0:7,0:3:6.02:0,6,84	0/0:2,0:1:3.01:0,3,38	0/0:13,0:13:39.13:0,39,559	0/0:9,0:9:15.03:0,15,184	0/0:8,0:8:13.20:0,13,109	0/1:17,3:19:67.11:67,0,432	0/0:9,0:9:13.93:0,14,179	0/0:19,0:19:54.18:0,54,772	0/0:22,0:22:66.21:0,66,909	0/0:17,0:17:11.89:0,12,99	0/0:17,0:17:13.28:0,13,137	0/0:20,0:20:49.04:0,49,673	0/1:11,5:16:99:150,0,264	0/0:20,0:20:42.15:0,42,599	0/0:26,0:26:75.25:0,75,1069	0/0:14,0:14:42.11:0,42,576	0/1:21,0:19:32.45:32,0,416	0/0:21,0:21:63.20:0,63,818	0/0:2,0:2:6.02:0,6,76	0/0:14,0:14:14.48:0,14,152	0/1:20,0:20:26.88:27,0,66	0/0:17,0:17:23.82:0,24,306	0/0:17,0:17:51.15:0,51,700	0/0:17,0:17:51.17:0,51,727	0/0:14,0:14:42.13:0,42,537	0/0:8,0:6:15.02:0,15,178
chr10	50569627	.	GA	G	627.82	PASS	AB=0.839;AC=8;AF=0.148;AN=54;BaseQRankSum=3.649;DP=419;FS=13.928;HRun=3;HaplotypeScore=92.2240;InbreedingCoeff=-0.1786;MQ=49.39;MQ0=10;MQRankSum=-4.971;QD=5.02;ReadPosRankSum=-0.132;VQSLOD=-0.5942;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:24.97:0,25,230	0/1:9,0:9:1.67:2,0,80	./.	0/0:5,0:2:6.02:0,6,73	0/0:14,0:14:42.13:0,42,586	0/1:5,5:10:99:159,0,143	0/1:3,4:7:58.76:131,0,59	0/1:21,1:21:35.91:36,0,345	0/1:10,3:13:95.91:96,0,251	0/0:18,0:18:51.17:0,51,730	0/0:21,0:21:57.19:0,57,807	0/0:15,0:15:11.93:0,12,120	0/0:17,0:17:14.88:0,15,125	0/0:18,0:18:48.88:0,49,661	0/0:17,0:17:21.04:0,21,422	0/1:14,7:21:99:197,0,533	0/0:25,0:25:72.24:0,72,1022	0/0:14,0:14:42.14:0,42,596	0/1:21,3:20:99:101,0,341	0/0:20,0:20:34.76:0,35,372	0/0:3,0:3:5.22:0,5,64	0/0:14,0:14:23.84:0,24,287	0/1:19,0:19:35.98:36,0,150	0/0:16,0:16:17.42:0,17,102	0/0:17,0:17:51.15:0,51,701	0/0:17,0:17:51.17:0,51,727	0/0:14,0:14:28.23:0,28,362	0/0:8,0:6:15.02:0,15,178
chr10	50569631	.	GA	G	1318.74	PASS	AB=0.825;AC=10;AF=0.185;AN=54;BaseQRankSum=4.135;DP=430;FS=20.044;HRun=3;HaplotypeScore=93.9745;InbreedingCoeff=-0.2337;MQ=48.96;MQ0=10;MQRankSum=-2.706;QD=8.14;ReadPosRankSum=-1.959;VQSLOD=-0.3860;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:9,6:15:99:166,0,185	0/0:9,0:9:27.08:0,27,337	./.	0/0:5,0:2:3.01:0,3,35	0/0:14,0:14:39.13:0,39,551	0/0:10,0:10:6.83:0,7,192	0/1:7,0:7:10.32:10,0,64	0/1:18,6:23:99:173,0,304	0/0:14,0:14:24.32:0,24,356	0/0:18,0:18:54.15:0,54,748	0/0:21,0:21:57.18:0,57,790	0/0:15,0:15:14.12:0,14,140	0/0:16,0:16:16.55:0,17,120	0/0:18,0:18:48.78:0,49,658	0/0:17,0:17:51.16:0,51,664	0/0:23,0:23:41.62:0,42,676	0/0:24,0:24:72.24:0,72,1024	0/0:15,0:15:45.11:0,45,611	0/1:18,5:19:99:256,0,242	0/1:10,11:21:99:361,0,310	0/1:2,1:3:31.64:52,0,32	0/1:16,0:16:4.12:4,0,332	0/1:19,0:19:80.96:81,0,162	0/1:14,6:20:91.31:207,0,91	0/0:18,0:18:54.16:0,54,727	0/0:18,0:18:54.17:0,54,752	0/1:9,5:14:99:146,0,283	0/0:8,0:6:15.02:0,15,178
chr10	50569737	.	A	AAT	694.21	PASS	AB=0.917;AC=6;AF=0.107;AN=56;BaseQRankSum=2.856;DP=561;FS=1.716;HRun=0;HaplotypeScore=103.0230;InbreedingCoeff=0.4902;MQ=69.99;MQ0=6;MQRankSum=-2.006;QD=11.20;ReadPosRankSum=-2.843;VQSLOD=3.1517;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:5.76:0,6,70	0/0:10,0:10:17.63:0,18,198	0/0:36,0:22:24.67:0,25,574	0/0:44,0:25:5.03:0,5,682	0/0:21,0:21:60.16:0,60,866	0/1:12,3:15:1.94:274,0,2	1/1:3,12:17:0.93:60,1,0	0/0:34,0:31:82.33:0,82,1053	0/1:13,0:13:24.51:400,0,25	0/0:28,0:28:84.22:0,84,1240	0/0:17,0:17:48.13:0,48,706	0/0:16,0:16:23.89:0,24,322	0/0:22,0:21:24.07:0,24,337	0/0:20,0:20:57.15:0,57,847	0/0:13,0:13:15.04:0,15,208	1/1:2,14:15:5.58:75,6,0	0/0:17,0:18:48.14:0,48,744	0/0:18,0:18:54.16:0,54,849	0/0:23,0:22:63.19:0,63,861	0/0:23,0:23:45.13:0,45,656	0/0:17,0:17:23.44:0,23,328	0/0:19,0:19:41.91:0,42,623	0/0:21,0:21:26.88:0,27,408	0/0:17,0:14:20.37:0,20,251	0/0:23,0:23:66.13:0,66,928	0/0:24,0:24:71.87:0,72,1033	0/0:10,0:10:11.79:0,12,146	0/0:11,0:11:28.41:0,28,438
chr10	50569853	.	G	GGTGTGT	14022.52	PASS	AB=0.760;AC=33;AF=0.589;AN=56;BaseQRankSum=10.213;DP=596;FS=21.535;HRun=0;HaplotypeScore=157.2830;InbreedingCoeff=0.9327;MQ=76.00;MQ0=0;MQRankSum=-12.568;QD=41.12;ReadPosRankSum=-1.027;VQSLOD=3.1964;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:25:47.80:759,48,0	1/1:5,0:5:6.02:176,6,0	0/0:38,0:33:68.57:0,69,1388	0/0:30,0:29:47.83:0,48,828	0/0:25,0:25:63.22:0,63,1368	1/1:4,14:20:33.11:1109,33,0	1/1:9,8:21:39.13:1204,39,0	1/1:19,1:30:60.19:1487,60,0	1/1:7,11:19:33.11:1100,33,0	0/0:21,0:21:57.18:0,57,1139	0/0:20,0:20:42.11:0,42,850	1/1:19,0:20:40.38:637,40,0	1/1:24,0:24:57.66:909,58,0	0/0:24,0:24:64.75:0,65,1361	1/1:21,0:21:39.13:1146,39,0	1/1:2,8:11:18.06:611,18,0	0/0:26,0:26:72.22:0,72,1559	0/0:13,0:13:36.05:0,36,648	0/1:13,0:18:1.53:899,0,2	1/1:7,0:17:21.07:561,21,0	1/1:11,1:18:12.51:328,13,0	1/1:22,0:22:48.29:848,48,0	1/1:20,0:20:39.33:718,39,0	1/1:33,0:33:59.83:1032,60,0	0/0:27,0:27:69.24:0,69,1500	0/0:23,0:23:54.17:0,54,1131	1/1:3,1:14:18.53:498,19,0	0/0:8,0:8:14.95:0,15,198
chr10	50569861	.	T	TGTGTGTG	14211.20	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=11.076;DP=580;FS=25.370;HRun=0;HaplotypeScore=175.1187;InbreedingCoeff=0.6349;MQ=70.86;MQ0=2;MQRankSum=-12.415;QD=42.17;ReadPosRankSum=2.301;VQSLOD=2.7324;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:26:71.75:1223,72,0	1/1:3,2:6:9.03:281,9,0	0/0:39,0:36:91.54:0,92,1882	0/0:23,0:24:48.73:0,49,1049	0/0:22,0:22:63.22:0,63,1627	1/1:18,0:19:11.81:892,12,0	1/1:21,0:21:20.83:1093,21,0	0/1:30,0:30:32.71:1626,0,33	1/1:15,0:15:13.77:811,14,0	0/0:20,0:20:57.18:0,57,1353	0/0:19,0:19:48.13:0,48,1104	1/1:20,0:20:35.68:562,36,0	1/1:24,0:24:59.87:820,60,0	0/0:26,0:26:67.74:0,68,1619	1/1:5,17:26:48.13:1728,48,0	0/1:12,0:12:99:414,0,103	0/0:27,0:27:75.21:0,75,1883	0/0:13,0:13:39.05:0,39,811	0/1:16,0:15:79.09:768,0,79	0/1:19,0:17:24.58:658,0,25	0/1:15,0:15:8.34:420,0,8	1/1:24,0:24:41.93:756,42,0	1/1:20,0:19:39.31:659,39,0	1/1:33,0:33:53.36:899,53,0	0/0:24,0:24:72.24:0,72,1798	0/0:19,0:19:54.17:0,54,1309	1/1:10,0:10:21.07:600,21,0	0/0:7,0:7:21.03:0,21,355
chr10	50569862	.	G	GTGT	8892.44	PASS	AB=0.962;AC=25;AF=0.446;AN=56;BaseQRankSum=12.950;DP=560;FS=19.271;HRun=0;HaplotypeScore=127.6644;InbreedingCoeff=0.3485;MQ=71.33;MQ0=2;MQRankSum=-11.361;QD=28.05;ReadPosRankSum=3.857;VQSLOD=3.6986;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:14,10:24:11.08:665,0,11	1/1:4,0:4:5.84:77,6,0	0/0:41,0:36:74.54:0,75,1432	0/0:24,0:23:35.18:0,35,765	0/0:22,0:22:63.22:0,63,1151	1/1:16,0:16:1.07:369,1,0	0/1:18,0:19:2.03:376,0,2	0/1:24,0:24:99:148,0,417	0/1:14,0:14:8:276,0,8	0/0:23,0:23:57.18:0,57,990	0/0:18,0:18:48.16:0,48,836	1/1:1,17:20:41.06:893,41,0	1/1:2,20:24:60.66:1274,61,0	0/0:26,0:26:70.78:0,71,1201	1/1:20,0:20:38.99:515,39,0	0/1:12,0:12:99:133,0,163	0/0:26,0:26:78.22:0,78,1357	0/0:13,0:13:39.06:0,39,607	0/1:16,0:15:96.73:97,0,227	0/1:18,0:16:51.65:185,0,52	0/1:13,0:13:26.51:65,0,27	1/1:0,24:25:57.15:1218,57,0	1/1:0,19:21:45.13:952,45,0	1/1:2,32:36:69.18:1488,69,0	0/0:24,0:24:72.16:0,72,1275	0/0:19,0:19:54.17:0,54,954	0/1:9,0:9:13.74:161,0,14	0/0:7,0:7:21.07:0,21,338
chr10	50569865	.	G	GA	654.80	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.745;DP=569;FS=1.590;HRun=0;HaplotypeScore=142.1153;InbreedingCoeff=0.8184;MQ=71.72;MQ0=2;MQRankSum=-4.989;QD=25.18;ReadPosRankSum=-0.856;VQSLOD=3.5640;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,10:26:65.53:750,66,0	0/0:5,0:5:3.44:0,3,27	0/0:42,0:37:97.31:0,97,1190	0/0:24,0:23:44.25:0,44,651	0/0:22,0:22:63.18:0,63,831	0/0:15,0:15:34.07:0,34,222	0/0:21,0:21:44.11:0,44,305	0/0:25,0:25:71.70:0,72,785	0/0:14,0:14:38.17:0,38,253	0/0:21,0:21:57.15:0,57,724	0/0:19,0:19:48.15:0,48,649	0/0:22,0:22:42.35:0,42,349	0/0:26,0:25:60.94:0,61,483	0/0:26,0:26:72.21:0,72,957	0/0:20,0:20:15.58:0,16,37	0/0:13,0:13:35.69:0,36,346	0/0:25,0:25:75.23:0,75,1013	0/0:10,0:10:30.10:0,30,417	0/0:17,0:16:44.80:0,45,460	0/0:18,0:16:41.34:0,41,320	0/0:13,0:13:12.60:0,13,113	0/0:24,0:24:50.26:0,50,443	0/0:23,0:22:37.81:0,38,314	0/0:35,0:35:68.84:0,69,701	0/0:24,0:24:69.20:0,69,914	0/0:22,0:22:66.13:0,66,779	0/0:10,0:10:16.65:0,17,146	0/0:7,0:7:21.07:0,21,283
chr10	50571637	.	CAGACAGACAGAA	C	3979.77	PASS	AB=1.000;AC=24;AF=0.429;AN=56;BaseQRankSum=6.770;DP=522;FS=6.908;HRun=0;HaplotypeScore=190.6605;InbreedingCoeff=0.1932;MQ=53.62;MQ0=6;MQRankSum=-1.536;QD=13.01;ReadPosRankSum=1.798;VQSLOD=1.9331;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:66.12:0,66,1472	1/1:4,0:4:12.02:178,12,0	0/0:8,0:3:6.02:0,6,95	0/0:13,0:9:21.04:0,21,355	0/0:35,0:35:93.07:0,93,2789	1/1:17,0:17:6.02:149,6,0	0/1:7,0:7:14.25:47,0,14	0/1:27,0:23:28.99:29,0,47	1/1:20,0:20:6.02:123,6,0	0/0:21,0:20:60.18:0,60,1964	0/0:19,0:19:51.13:0,51,1106	0/1:23,0:23:99:267,0,460	0/1:33,0:33:99:621,0,150	0/0:21,0:21:44.22:0,44,2213	1/1:1,24:25:15.05:540,15,0	1/1:21,0:21:51.12:823,51,0	0/0:19,0:19:51.06:0,51,1420	0/1:18,0:18:9.93:10,0,1297	1/1:13,0:13:17.91:127,18,0	0/1:14,0:14:20.09:136,0,20	1/1:18,0:18:1.17:96,1,0	0/1:15,0:15:23.87:218,0,24	0/1:19,0:19:99:238,0,236	0/1:19,0:19:96.50:174,0,97	0/0:27,0:27:81.24:0,81,2386	0/0:21,0:21:60.19:0,60,1878	0/1:13,0:13:12.36:205,0,12	0/0:5,0:5:15.05:0,15,687
chr10	50571641	.	CAGACAGAAAGAAAGAA	C	4263.94	PASS	AB=1.000;AC=27;AF=0.482;AN=56;BaseQRankSum=3.984;DP=501;FS=5.086;HRun=0;HaplotypeScore=218.3544;InbreedingCoeff=0.4346;MQ=53.51;MQ0=6;MQRankSum=-0.199;QD=14.36;ReadPosRankSum=-2.287;VQSLOD=3.3134;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:66.10:0,66,1779	0/1:4,0:4:36.97:37,0,48	0/0:4,0:2:5.98:0,6,47	0/0:10,0:7:17.98:0,18,160	0/0:32,0:32:93.03:0,93,3463	1/1:0,16:16:6.02:280,6,0	1/1:6,0:6:12.03:260,12,0	1/1:25,0:20:47.06:474,47,0	1/1:0,19:19:6.02:254,6,0	0/0:21,0:20:57.14:0,57,2431	0/0:16,0:16:48.02:0,48,1343	0/1:22,0:22:74.49:74,0,1124	0/1:31,0:31:99:179,0,676	0/0:21,0:21:59.63:0,60,2605	1/1:24,0:24:13.66:84,14,0	1/1:21,0:21:8.84:549,9,0	0/0:18,0:18:48.09:0,48,1984	0/1:18,0:18:10.67:11,0,1727	1/1:14,0:14:36.07:567,36,0	1/1:1,12:13:26.90:477,27,0	1/1:17,0:17:41.93:486,42,0	0/1:16,0:16:36.83:37,0,242	0/1:20,0:20:32.74:33,0,880	0/1:19,0:19:48.62:49,0,589	0/0:28,0:28:81.20:0,81,3163	0/0:22,0:22:63.18:0,63,2298	1/1:0,12:12:8.69:415,9,0	0/0:6,0:6:18.06:0,18,828
chr10	50571645	.	CAGAAAGAAAGAA	C	2145	PASS	AB=1.000;AC=19;AF=0.365;AN=52;BaseQRankSum=3.917;DP=502;FS=2.010;HRun=0;HaplotypeScore=194.0534;InbreedingCoeff=0.7911;MQ=53.39;MQ0=4;MQRankSum=-3.351;QD=12.92;ReadPosRankSum=0.295;VQSLOD=2.6131;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:45.14:0,45,1300	0/0:4,0:4:3.01:0,3,32	./.	./.	0/0:31,0:31:69.22:0,69,2488	1/1:16,0:16:6.02:185,6,0	1/1:8,0:8:14.08:290,14,0	1/1:23,0:18:14.37:165,14,0	1/1:19,0:19:6.02:159,6,0	0/0:20,0:19:42.14:0,42,1694	0/0:16,0:16:30.08:0,30,858	0/0:23,0:23:54.17:0,54,1260	0/0:32,0:32:45.04:0,45,726	0/0:21,0:21:48.09:0,48,1835	1/1:24,0:24:15.05:340,15,0	0/1:21,0:21:30.44:169,0,30	0/0:18,0:18:36.08:0,36,1465	0/0:19,0:19:22.13:0,22,1284	1/1:5,10:15:30.02:452,30,0	1/1:12,0:12:3:184,3,0	1/1:16,0:16:7.58:120,8,0	0/0:15,0:15:21.03:0,21,277	0/0:21,0:21:51.01:0,51,942	0/0:20,0:20:19.78:0,20,533	0/0:27,0:28:60.19:0,60,2228	0/0:22,0:22:45.14:0,45,1683	1/1:12,0:12:8.44:272,8,0	0/0:8,0:8:24.08:0,24,740
chr10	50571665	.	A	AAAAG	1657.17	PASS	AB=0.885;AC=7;AF=0.125;AN=56;BaseQRankSum=6.149;DP=532;FS=17.424;HRun=0;HaplotypeScore=129.4659;InbreedingCoeff=-0.1374;MQ=54.35;MQ0=7;MQRankSum=-6.970;QD=11.92;ReadPosRankSum=0.720;VQSLOD=1.8843;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:65.16:0,65,1111	0/0:5,0:5:15.05:0,15,259	0/1:3,0:3:2.37:2,0,84	0/0:9,0:3:6.02:0,6,97	0/0:36,0:36:99:0,105,1809	0/0:20,0:20:14.71:0,15,228	0/0:11,0:11:27.08:0,27,415	0/0:20,0:15:41.90:0,42,550	0/1:20,0:20:7.27:7,0,104	0/0:19,0:18:51.17:0,51,991	0/0:15,0:15:42.14:0,42,762	0/1:22,2:24:99:731,0,258	0/1:16,16:33:97.87:98,0,400	0/0:24,0:24:69.23:0,69,1211	0/0:24,0:24:21.05:0,21,297	0/0:17,0:17:46.62:0,47,594	0/0:19,0:19:54.01:0,54,930	0/0:17,0:17:47.79:0,48,832	0/0:12,0:11:32.78:0,33,449	0/0:16,0:16:21.51:0,22,259	0/0:13,0:13:27.03:0,27,387	0/1:7,8:15:93.58:94,0,216	0/1:23,1:24:99:550,0,399	0/1:20,0:20:99:298,0,287	0/0:29,0:29:84.26:0,84,1521	0/0:28,0:28:84.25:0,84,1459	0/0:17,0:17:23.35:0,23,334	0/0:11,0:11:33.11:0,33,555
chr10	50572337	.	AGTGTGT	A	1194.79	PASS	AB=0.714;AC=13;AF=0.260;AN=50;BaseQRankSum=3.017;DP=522;FS=1.807;HRun=0;HaplotypeScore=139.0778;InbreedingCoeff=0.6699;MQ=58.69;MQ0=8;MQRankSum=-4.451;QD=7.76;ReadPosRankSum=-1.832;VQSLOD=2.1865;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:14.88:0,15,402	0/0:6,0:13:12.04:0,12,314	0/0:12,0:10:3.01:0,3,46	./.	0/0:21,0:20:24.08:0,24,711	1/1:1,14:16:6.02:123,6,0	0/1:9,6:14:28.82:56,0,29	1/1:25,8:32:21.01:334,21,0	1/1:7,6:11:3.01:62,3,0	0/0:21,0:22:39.13:0,39,1143	0/0:17,0:18:21.05:0,21,508	0/0:11,0:16:6.02:0,6,138	0/0:12,0:21:19.42:0,19,312	0/0:11,0:13:21.07:0,21,564	0/0:9,0:21:9.03:0,9,202	./.	0/0:21,0:22:43.02:0,43,1170	0/0:13,0:15:33.07:0,33,845	1/1:20,6:25:18.06:369,18,0	1/1:9,15:24:2.79:62,3,0	./.	0/0:13,0:13:9.03:0,9,158	0/0:11,0:13:3.01:0,3,92	0/0:19,0:19:9:0,9,154	0/0:19,0:23:42.14:0,42,1186	0/0:30,0:31:52.06:0,52,1525	1/1:9,14:27:18.04:350,18,0	0/0:12,0:13:29.13:0,29,792
chr10	50572381	.	C	CAT	289.90	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=0.929;DP=526;FS=6.007;HRun=0;HaplotypeScore=112.0133;InbreedingCoeff=0.6245;MQ=54.73;MQ0=18;MQRankSum=0.789;QD=5.80;ReadPosRankSum=0.288;VQSLOD=2.7840;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,13:15:19.61:293,20,0	0/0:13,0:13:24.08:0,24,310	0/1:17,0:5:11.66:12,0,33	0/0:14,0:8:12.48:0,12,138	0/0:19,0:18:51.17:0,51,661	0/0:27,0:27:42.10:0,42,516	0/0:12,0:11:2.74:0,3,39	0/0:41,0:40:63.15:0,63,1075	0/0:18,0:17:21.05:0,21,268	0/0:27,0:27:62.87:0,63,787	0/0:19,0:19:48.14:0,48,609	0/0:15,0:15:26.51:0,27,300	0/0:16,0:16:17.46:0,17,204	0/0:10,0:10:24.07:0,24,295	0/0:18,0:18:23.89:0,24,295	1/1:2,10:11:6.02:102,6,0	0/0:18,0:18:7.69:0,8,402	0/0:15,0:15:38.35:0,38,485	0/0:15,0:14:24.95:0,25,347	0/0:25,0:25:20.99:0,21,259	0/0:10,0:10:15.02:0,15,194	0/0:8,0:8:15.05:0,15,195	0/0:13,0:12:15.01:0,15,195	0/0:18,0:18:27.09:0,27,351	0/0:21,0:21:57.18:0,57,722	0/0:24,0:23:59.51:0,60,716	0/0:35,0:34:51.09:0,51,627	0/0:25,0:24:51.10:0,51,628
chr10	50573028	.	TGAG	T	1849.08	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-3.183;DP=736;FS=1.239;HRun=0;HaplotypeScore=141.3755;InbreedingCoeff=0.9970;MQ=83.84;MQ0=0;MQRankSum=-1.033;QD=43.00;ReadPosRankSum=1.600;VQSLOD=5.1302;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,138,2067	0/0:8,0:8:24.06:0,24,333	0/0:23,0:23:63.22:0,63,1423	0/0:32,0:31:49.64:0,50,1681	0/0:21,0:21:63.19:0,63,1440	0/0:38,0:38:99:0,105,1572	0/0:27,0:27:78.26:0,78,1136	0/0:32,0:32:90.25:0,90,1186	0/0:28,1:29:34.40:0,34,1210	0/0:29,0:29:87.30:0,87,1999	0/0:18,0:18:54.17:0,54,1229	0/0:22,0:22:57.19:0,57,847	0/0:32,0:32:96.28:0,96,1408	0/0:28,0:28:84.29:0,84,1968	0/0:34,0:34:94.20:0,94,1369	1/1:5,38:43:40.47:1944,40,0	0/0:33,0:33:96.29:0,96,2075	0/0:17,0:17:51.12:0,51,1109	0/0:12,0:12:29.61:0,30,423	0/0:29,0:29:78.25:0,78,1136	0/0:24,0:24:72.24:0,72,1075	0/0:23,0:23:66.21:0,66,959	0/0:22,0:22:66.21:0,66,979	0/0:16,0:16:45.15:0,45,673	0/0:28,0:28:84.27:0,84,1937	0/0:32,0:32:96.33:0,96,2269	0/0:24,0:24:69.23:0,69,1043	0/0:12,0:12:36.09:0,36,797
chr10	50577652	.	CTCTG	C	4193.11	PASS	AB=0.956;AC=14;AF=0.250;AN=56;BaseQRankSum=9.921;DP=802;FS=5.510;HRun=0;HaplotypeScore=142.6085;InbreedingCoeff=0.7961;MQ=70.21;MQ0=9;MQRankSum=0.743;QD=19.32;ReadPosRankSum=2.341;VQSLOD=2.9464;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:43:15:0,15,169	0/0:2,0:10:18.06:0,18,315	0/0:38,0:27:9.03:0,9,209	0/0:55,0:37:12.04:0,12,261	0/0:23,0:23:60.21:0,60,1399	0/1:21,1:22:17.25:17,0,612	0/0:37,1:38:21.86:0,22,1374	0/0:31,0:31:27.08:0,27,598	0/0:27,0:27:60.21:0,60,1400	0/0:29,0:29:54.19:0,54,1249	0/1:20,1:21:8.22:8,0,779	1/1:12,22:34:48.16:758,48,0	1/1:17,19:36:42.35:663,42,0	0/0:25,0:25:54.17:0,54,1225	0/0:12,0:36:51.06:0,51,910	1/1:12,18:29:45.15:710,45,0	0/0:23,0:23:51.04:0,51,1115	0/0:13,0:13:15.05:0,15,357	0/0:15,0:14:15.05:0,15,357	0/0:40,0:40:54.19:0,54,1259	0/0:44,0:44:87.22:0,87,1878	1/1:7,6:13:18.06:284,18,0	1/1:9,15:24:42.14:663,42,0	1/1:8,29:37:69.23:1089,69,0	0/0:28,0:28:60.21:0,60,1401	0/0:33,0:33:48.16:0,48,1128	0/0:25,0:25:51.16:0,51,1137	0/0:9,0:9:27.09:0,27,642
chr10	50577892	.	TAAC	T	10419.37	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=15.035;DP=616;FS=2.666;HRun=0;HaplotypeScore=94.3570;InbreedingCoeff=0.9998;MQ=75.47;MQ0=0;MQRankSum=-6.958;QD=43.60;ReadPosRankSum=0.460;VQSLOD=6.0221;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,25:26:63.22:1072,63,0	1/1:0,13:13:36.12:599,36,0	0/0:22,0:22:57.19:0,57,1230	0/0:16,0:16:41.98:0,42,769	0/0:21,0:21:57.18:0,57,1267	1/1:0,19:19:51.17:868,51,0	1/1:0,17:17:48.16:803,48,0	1/1:1,28:29:84.26:1353,84,0	1/1:0,14:14:36.12:613,36,0	0/0:31,0:31:87.16:0,87,1892	0/0:36,0:36:99:0,108,2396	0/0:27,0:27:78.27:0,78,1751	0/0:27,0:27:81.26:0,81,1822	0/0:25,0:25:72.23:0,72,1611	1/1:1,19:20:48.16:818,48,0	1/1:5,15:20:54.17:882,54,0	0/0:26,0:26:78.27:0,78,1755	0/0:15,0:15:39.13:0,39,866	1/1:2,15:17:45.15:766,45,0	1/1:2,23:25:65.94:1025,66,0	1/1:0,12:12:27.09:445,27,0	0/0:18,0:18:48.16:0,48,1105	0/0:22,0:22:66.20:0,66,1421	0/0:16,0:16:48.14:0,48,1040	0/0:25,0:25:75.26:0,75,1661	0/0:35,0:35:99:0,105,2285	1/1:0,27:27:69.17:1175,69,0	0/0:15,0:15:42.14:0,42,967
chr10	50577964	.	CA	C	340.76	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.007;DP=591;FS=3.103;HRun=9;HaplotypeScore=65.5534;InbreedingCoeff=0.9753;MQ=72.16;MQ0=0;MQRankSum=-1.393;QD=15.49;ReadPosRankSum=1.858;VQSLOD=3.9736;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:60.17:0,60,682	0/0:15,0:15:39.09:0,39,437	0/0:13,0:13:23.72:0,24,231	0/0:10,0:10:20.16:0,20,256	0/0:38,0:38:99:0,108,1246	0/0:19,0:19:48.13:0,48,543	0/0:11,0:12:32.93:0,33,361	0/0:32,0:32:78.21:0,78,884	0/0:14,0:14:36.11:0,36,415	0/0:23,0:23:60.14:0,60,678	0/0:39,0:39:99:0,105,1181	0/0:14,0:14:36.11:0,36,415	0/0:16,0:16:36.05:0,36,400	0/0:24,0:24:69.21:0,69,796	0/0:18,0:18:45.12:0,45,511	1/1:4,18:22:19.39:432,19,0	0/0:30,0:30:84.25:0,84,969	0/0:16,0:16:45.13:0,45,519	0/0:21,0:21:54.16:0,54,623	0/0:25,0:25:72.20:0,72,822	0/0:8,0:8:18.03:0,18,191	0/0:17,0:17:36.11:0,36,415	0/0:30,1:31:53.77:0,54,873	0/0:11,0:11:27.08:0,27,312	0/0:34,0:34:96.29:0,96,1108	0/0:24,0:24:63.19:0,63,727	0/0:30,0:30:72.15:0,72,804	0/0:10,0:10:24.07:0,24,273
chr10	50578152	.	T	TCC	13699.72	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=14.539;DP=676;FS=5.611;HRun=6;HaplotypeScore=152.7101;InbreedingCoeff=0.9983;MQ=65.88;MQ0=5;MQRankSum=-10.983;QD=36.24;ReadPosRankSum=-5.627;VQSLOD=2.0277;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:12,37:49:99:2049,129,0	1/1:4,1:10:27.04:267,27,0	0/0:42,0:34:60.07:0,60,867	0/0:48,0:32:53.11:0,53,700	0/0:27,0:27:75.23:0,75,915	1/1:9,13:22:48.13:734,48,0	1/1:4,12:16:39.09:623,39,0	1/1:23,3:27:42.11:634,42,0	1/1:11,16:27:75.19:1166,75,0	0/0:28,0:28:81.25:0,81,988	0/0:18,0:18:54.16:0,54,650	1/1:6,8:14:39.12:627,39,0	1/1:2,18:20:57.15:922,57,0	0/0:33,0:33:84.24:0,84,1013	1/1:7,0:29:78.09:802,78,0	1/1:2,0:22:53.84:538,54,0	0/0:24,0:24:69.19:0,69,827	0/0:10,0:10:30.09:0,30,364	1/1:4,8:12:24.08:399,24,0	1/1:12,15:27:75.16:1133,75,0	1/1:11,13:24:44.52:714,45,0	1/1:3,13:16:42.14:696,42,0	1/1:10,10:20:45.15:749,45,0	1/1:5,14:19:39.09:617,39,0	0/0:39,0:39:99:0,108,1315	0/0:23,0:23:66.19:0,66,792	1/1:11,13:22:63.20:1030,63,0	0/0:6,0:6:18.06:0,18,220
chr10	50578193	.	GTA	G	11996.59	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=15.884;DP=719;FS=7.787;HRun=0;HaplotypeScore=150.5183;InbreedingCoeff=0.9979;MQ=61.47;MQ0=2;MQRankSum=-6.566;QD=28.29;ReadPosRankSum=0.863;VQSLOD=6.0661;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,52:62:99:1554,108,0	1/1:1,9:10:21.07:290,21,0	0/0:29,1:17:36.46:0,36,558	0/0:31,0:26:33.34:0,33,784	0/0:27,0:27:78.23:0,78,1392	1/1:2,19:21:51.17:729,51,0	1/1:0,26:26:48.16:682,48,0	1/1:2,29:31:89.82:1163,90,0	1/1:1,26:27:57.19:821,57,0	0/0:30,0:30:90.30:0,90,1649	0/0:23,0:23:69.22:0,69,1248	1/1:3,12:15:33.09:464,33,0	1/1:1,31:31:84.28:1216,84,0	0/0:34,0:34:99:0,102,1683	1/1:2,26:28:54.18:784,54,0	1/1:3,14:17:42.13:591,42,0	0/0:35,0:35:99:0,102,1710	0/0:15,0:15:45.08:0,45,729	1/1:0,13:13:32.96:382,33,0	1/1:1,21:22:39.13:565,39,0	1/1:1,36:37:51.43:726,51,0	1/1:2,20:22:30.09:412,30,0	1/1:2,22:24:41.89:607,42,0	1/1:3,21:24:42.14:615,42,0	0/0:38,0:38:99:0,111,1789	0/0:25,0:25:75.24:0,75,1368	1/1:0,12:12:27.09:396,27,0	0/0:7,0:7:18.06:0,18,326
chr10	50579734	.	ATT	A	4456.71	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=7.970;DP=603;FS=2.587;HRun=11;HaplotypeScore=80.4790;InbreedingCoeff=0.9840;MQ=76.44;MQ0=1;MQRankSum=-0.395;QD=25.18;ReadPosRankSum=-0.400;VQSLOD=4.8280;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:3,0:26:63.07:0,63,612	0/0:2,0:8:7.49:0,7,26	0/0:17,0:17:18.01:0,18,215	0/0:14,0:14:22.87:0,23,348	0/0:36,0:38:99:0,108,1580	1/1:4,18:22:48.08:511,48,0	1/1:2,19:21:51.12:543,51,0	1/1:6,23:29:66.10:686,66,0	1/1:3,16:19:45.09:479,45,0	0/0:25,0:26:63.20:0,63,931	0/0:34,0:35:98.81:0,99,1463	0/0:17,0:18:50.66:0,51,747	0/0:27,0:27:78.24:0,78,1158	0/0:15,0:15:39.12:0,39,575	0/0:0,0:16:39.93:0,40,137	0/0:1,0:24:57.09:0,57,546	0/0:25,0:27:71.21:0,71,1033	0/0:16,0:16:45.14:0,45,667	1/1:2,22:24:66.14:694,66,0	1/1:4,20:24:57.12:607,57,0	1/1:2,8:10:24.04:255,24,0	0/0:23,0:23:60.19:0,60,901	0/0:19,0:19:48.16:0,48,739	0/0:16,0:16:39.13:0,39,598	0/0:31,0:32:96.25:0,96,1355	0/0:22,0:22:48.16:0,48,732	1/1:2,25:27:65.88:683,66,0	0/0:7,0:7:21.07:0,21,323
chr10	50580596	.	G	GTT	5004.66	PASS	AB=0.553;AC=19;AF=0.339;AN=56;BaseQRankSum=-4.816;DP=632;FS=2.526;HRun=11;HaplotypeScore=84.3307;InbreedingCoeff=0.8967;MQ=73.57;MQ0=2;MQRankSum=0.396;QD=22.34;ReadPosRankSum=0.095;VQSLOD=4.5561;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:48.05:0,48,465	1/1:0,0:11:22.46:77,22,0	0/0:34,0:20:11.06:0,11,267	0/0:21,0:15:4.72:0,5,54	0/0:28,0:30:59.46:0,59,591	1/1:8,28:37:71.73:1008,72,0	1/1:9,10:20:33.07:449,33,0	1/1:12,18:30:44.55:532,45,0	1/1:1,10:11:24.08:348,24,0	0/0:22,0:22:50.61:0,51,494	0/0:17,0:18:38.96:0,39,428	0/0:25,0:26:68.80:0,69,643	0/0:20,0:22:53.73:0,54,549	0/0:24,0:25:60.01:0,60,626	0/1:5,0:26:15.09:86,0,15	0/0:20,0:20:57.05:0,57,546	0/0:32,0:32:84.10:0,84,809	0/0:17,0:17:41.78:0,42,390	1/1:4,15:23:48.15:662,48,0	1/1:9,22:31:68.44:855,68,0	1/1:2,12:14:29.46:399,29,0	0/0:19,0:21:40.02:0,40,437	0/0:23,0:23:66.09:0,66,640	0/0:15,0:15:45.06:0,45,430	0/0:20,0:21:35.83:0,36,407	0/0:28,0:28:69.03:0,69,665	1/1:3,16:20:42.13:590,42,0	0/0:12,0:13:26.96:0,27,311
chr10	50580963	.	G	GTCA	7292.47	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-1.119;DP=753;FS=0.000;HRun=0;HaplotypeScore=136.5278;InbreedingCoeff=0.9997;MQ=87.66;MQ0=0;MQRankSum=-2.753;QD=50.29;ReadPosRankSum=2.699;VQSLOD=6.7641;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:78.27:0,78,1229	0/0:12,0:12:30.10:0,30,473	0/0:28,0:28:75.22:0,75,1153	0/0:27,0:27:69.23:0,69,1060	0/0:33,0:33:87.28:0,87,1345	0/0:30,0:30:84.25:0,84,1302	0/0:13,0:13:36.09:0,36,518	0/0:37,0:37:90.29:0,90,1375	0/0:28,0:28:78.27:0,78,1229	0/0:34,0:34:99:0,99,1498	0/0:21,0:21:60.19:0,60,922	1/1:5,25:30:69.24:1507,69,0	1/1:5,39:45:99:2575,120,0	0/0:30,0:30:84.29:0,84,1332	0/0:37,0:37:99:0,111,1706	0/0:48,0:48:99:0,132,2061	0/0:25,0:25:72.25:0,72,1142	0/0:26,0:26:66.22:0,66,1042	0/0:12,0:12:36.12:0,36,565	0/0:35,0:35:99:0,99,1536	0/0:17,0:17:48.16:0,48,755	1/1:5,20:25:54.19:1180,54,0	1/1:3,20:26:51.11:1113,51,0	1/1:2,17:19:42.14:917,42,0	0/0:22,0:22:63.21:0,63,993	0/0:21,0:21:57.19:0,57,901	0/0:30,0:30:87.30:0,87,1368	0/0:13,0:13:30.08:0,30,452
chr10	50582036	.	GAC	G	10263.56	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=14.187;DP=599;FS=6.221;HRun=0;HaplotypeScore=138.7615;InbreedingCoeff=0.9950;MQ=59.34;MQ0=3;MQRankSum=-11.443;QD=31.39;ReadPosRankSum=-2.751;VQSLOD=5.8176;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,12:14:26.78:374,27,0	1/1:5,4:8:18.06:233,18,0	0/0:24,0:18:48.13:0,48,721	0/0:19,0:15:33.09:0,33,494	0/0:38,0:38:99:0,114,1862	1/1:6,19:24:60.16:750,60,0	1/1:1,10:11:30.10:389,30,0	1/1:18,19:36:30.94:850,31,0	1/1:1,10:11:30.10:389,30,0	0/0:25,0:25:75.25:0,75,1243	0/0:23,0:23:66.22:0,66,1082	1/1:3,12:15:39.13:505,39,0	1/1:7,20:26:75.24:972,75,0	0/0:14,0:14:42.14:0,42,710	1/1:3,19:22:63.20:816,63,0	1/1:3,22:25:66.21:856,66,0	0/0:29,0:29:56.50:0,57,1099	0/0:24,0:24:50.69:0,51,952	1/1:8,12:19:42.10:519,42,0	1/1:5,26:31:87.28:1123,87,0	1/1:2,7:9:15.05:194,15,0	1/1:0,7:7:21.07:272,21,0	1/1:6,18:24:62.90:815,63,0	1/1:4,6:10:21.07:272,21,0	0/0:20,0:20:51.17:0,51,847	0/0:28,1:29:39.21:0,39,1181	1/1:8,22:30:72.23:934,72,0	0/0:27,0:27:81.23:0,81,1346
chr10	50582062	.	TAC	T	3694.85	PASS	AB=0.840;AC=28;AF=0.500;AN=56;BaseQRankSum=12.851;DP=633;FS=3.118;HRun=0;HaplotypeScore=176.6958;InbreedingCoeff=0.7848;MQ=49.19;MQ0=12;MQRankSum=-9.802;QD=11.77;ReadPosRankSum=-5.238;VQSLOD=2.6316;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,4:17:5.67:50,6,0	1/1:8,0:10:20.59:131,21,0	0/0:33,0:12:17.98:0,18,256	0/0:26,0:11:11.95:0,12,138	0/0:44,0:44:99:0,117,1949	1/1:12,11:23:21.02:224,21,0	0/1:9,8:17:1.81:117,0,2	1/1:18,19:33:51.15:635,51,0	1/1:6,8:14:15.02:161,15,0	0/0:27,0:26:75.25:0,75,1233	0/0:21,0:21:54.18:0,54,899	1/1:7,8:15:8.91:77,9,0	1/1:9,16:25:29.09:314,29,0	0/0:20,0:20:51.17:0,51,852	0/1:11,0:24:8.14:66,0,8	1/1:2,25:27:21.01:248,21,0	0/0:24,0:24:63.05:0,63,943	0/0:24,0:24:44.81:0,45,635	1/1:12,8:17:39.11:464,39,0	1/1:10,20:30:36.03:376,36,0	1/1:8,2:10:2.99:23,3,0	1/1:4,5:9:11.98:101,12,0	0/0:7,12:19:0:0,0,0	0/0:5,3:8:0:0,0,0	0/0:19,0:19:42.14:0,42,692	0/0:26,0:26:69.24:0,69,1152	1/1:18,18:36:64.67:706,65,0	0/0:28,0:28:59.86:0,60,908
chr10	50582072	.	CACAGAT	C	5105.71	PASS	AB=0.925;AC=26;AF=0.464;AN=56;BaseQRankSum=11.187;DP=610;FS=4.476;HRun=0;HaplotypeScore=191.5909;InbreedingCoeff=0.6409;MQ=49.31;MQ0=13;MQRankSum=-11.517;QD=16.63;ReadPosRankSum=-3.391;VQSLOD=3.6324;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,0:11:5.98:79,6,0	0/1:8,0:8:18.75:19,0,19	0/0:26,0:8:17.98:0,18,256	0/0:22,0:8:11.99:0,12,142	0/0:41,0:41:99:0,123,2961	1/1:12,8:20:21.07:361,21,0	0/1:12,9:21:1.81:146,0,2	1/1:35,0:30:51.11:635,51,0	1/1:11,6:17:15.05:253,15,0	0/0:29,0:27:81.27:0,81,1758	0/0:21,0:21:15.83:0,16,1213	1/1:8,7:15:8.86:214,9,0	1/1:17,8:25:30.10:496,30,0	0/0:19,0:19:54.19:0,54,1379	0/1:21,0:21:10.51:11,0,35	0/1:27,0:27:74.61:75,0,124	0/0:25,0:25:72.07:0,72,1340	0/0:23,0:23:27.58:0,28,967	1/1:12,6:16:45.15:690,45,0	1/1:22,9:32:36.11:661,36,0	1/1:2,8:10:3.01:69,3,0	1/1:5,5:10:12.04:282,12,0	0/0:12,3:16:0:0,0,0	0/0:4,4:8:0:0,0,0	0/0:20,0:20:45.15:0,45,1159	0/0:27,0:27:78.27:0,78,1690	1/1:23,14:37:69.17:1115,69,0	0/0:26,0:26:33.97:0,34,715
chr10	50582074	.	CAG	C	1914.61	PASS	AB=1.000;AC=27;AF=0.482;AN=56;BaseQRankSum=14.457;DP=608;FS=1.904;HRun=0;HaplotypeScore=170.0815;InbreedingCoeff=0.6857;MQ=49.34;MQ0=15;MQRankSum=-10.262;QD=6.26;ReadPosRankSum=-1.132;VQSLOD=3.2142;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:12,0:12:5.86:35,6,0	1/1:2,7:9:21.07:278,21,0	0/0:25,0:8:15.05:0,15,227	0/0:21,0:7:9.48:0,9,113	0/0:41,0:41:99:0,123,2014	1/1:20,0:20:20.41:123,20,0	0/1:21,0:21:24.66:39,0,25	0/1:34,0:27:87.86:193,0,88	1/1:16,0:16:14.65:96,15,0	0/0:28,0:26:81.26:0,81,1290	0/0:22,0:22:43.68:0,44,886	1/1:15,0:15:8.60:48,9,0	1/1:25,0:25:29.37:185,29,0	0/0:19,0:19:54.17:0,54,897	1/1:14,8:22:12.04:170,12,0	0/1:27,0:27:4.80:79,0,5	0/0:26,0:26:63.99:0,64,897	0/0:20,0:20:25.49:0,25,638	1/1:19,0:17:28.71:236,29,0	1/1:31,0:31:32.21:197,32,0	1/1:10,0:10:2.90:16,3,0	1/1:10,0:10:11.58:63,12,0	0/0:16,0:16:0:0,0,0	0/0:8,0:8:0:0,0,0	0/0:14,0:22:45.15:0,45,756	0/0:27,0:27:81.24:0,81,1225	1/1:35,0:35:61.19:360,61,0	0/0:17,0:26:41.16:0,41,632
chr10	50582076	.	GATAGAT	G	1163.06	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=9.742;DP=594;FS=11.986;HRun=0;HaplotypeScore=198.1240;InbreedingCoeff=0.6129;MQ=49.47;MQ0=13;MQRankSum=-9.702;QD=5.43;ReadPosRankSum=-0.975;VQSLOD=1.5982;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:5,5:10:4.83:73,5,0	0/1:9,0:9:43.02:43,0,112	0/0:25,0:7:15.05:0,15,214	0/0:19,0:5:9.02:0,9,112	0/0:42,0:42:99:0,126,2973	1/1:20,0:20:3.82:97,4,0	0/1:19,0:19:23.08:23,0,60	0/0:33,0:27:50.12:0,50,289	1/1:16,0:16:7.54:77,8,0	0/0:28,0:26:78.26:0,78,1683	0/0:21,0:21:58.73:0,59,1298	1/1:15,0:15:8.86:108,9,0	1/1:25,0:25:18.90:146,19,0	0/0:20,0:20:57.19:0,57,1476	0/0:21,0:21:11.68:0,12,92	0/0:27,0:27:12.13:0,12,375	0/0:25,0:25:59.35:0,59,1234	0/0:20,0:20:53.48:0,53,1150	0/1:16,0:16:28.15:71,0,28	1/1:31,0:31:16.72:237,17,0	1/1:10,0:10:3.01:34,3,0	1/1:10,0:10:12.04:145,12,0	0/0:16,0:16:0:0,0,0	0/0:8,0:8:0:0,0,0	0/0:23,0:23:48.16:0,48,1207	0/0:27,0:27:81.27:0,81,1882	1/1:32,0:33:28.09:298,28,0	0/0:25,0:25:41.45:0,41,665
chr10	50582176	.	TA	T	732.28	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.231;DP=636;FS=0.000;HRun=4;HaplotypeScore=69.4006;InbreedingCoeff=0.9975;MQ=76.92;MQ0=0;MQRankSum=-1.612;QD=30.51;ReadPosRankSum=1.100;VQSLOD=3.9137;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:48.15:0,48,654	0/0:10,0:10:30.10:0,30,419	0/0:13,0:13:29.25:0,29,352	0/0:17,0:17:39.09:0,39,501	0/0:29,0:27:84.25:0,84,1142	0/0:22,0:22:63.21:0,63,882	0/0:10,0:10:27.09:0,27,377	0/0:41,0:40:99:0,117,1592	0/0:22,0:22:63.21:0,63,881	0/0:36,0:36:99:0,105,1470	0/0:27,0:27:78.26:0,78,1092	0/0:14,0:14:42.10:0,42,534	0/0:33,0:33:96.21:0,96,1313	0/0:23,0:23:69.19:0,69,913	0/0:25,0:25:72.21:0,72,983	1/1:0,24:24:69.21:827,69,0	0/0:19,0:19:54.18:0,54,748	0/0:17,0:17:48.15:0,48,652	0/0:23,0:23:69.22:0,69,936	0/0:35,0:35:99:0,99,1336	0/0:14,0:14:33.11:0,33,462	0/0:18,0:18:51.17:0,51,714	0/0:18,0:18:54.18:0,54,755	0/0:24,0:24:69.23:0,69,965	0/0:33,0:33:96.29:0,96,1294	0/0:30,0:30:84.28:0,84,1176	0/0:23,0:21:63.21:0,63,880	0/0:17,0:17:48.16:0,48,672
chr10	50584894	.	T	TC	4339.57	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-11.959;DP=694;FS=2.225;HRun=5;HaplotypeScore=69.2956;InbreedingCoeff=0.9998;MQ=82.08;MQ0=0;MQRankSum=-2.337;QD=35.57;ReadPosRankSum=2.601;VQSLOD=4.9200;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,129,1386	0/0:11,0:11:30.07:0,30,322	0/0:28,0:27:75.05:0,75,765	0/0:22,0:23:53.55:0,54,533	0/0:25,0:25:66.12:0,66,697	0/0:20,0:20:54.06:0,54,545	0/0:19,0:19:54.14:0,54,580	0/0:29,0:29:66.16:0,66,709	0/0:35,0:35:96.22:0,96,1022	0/0:24,0:24:66.16:0,66,708	0/0:18,0:18:51.11:0,51,540	1/1:0,25:25:75.24:987,75,0	1/1:2,23:25:57.19:750,57,0	0/0:34,0:34:81.14:0,81,844	0/0:35,0:35:99:0,105,1118	0/0:26,0:26:75.19:0,75,806	0/0:29,0:29:78.16:0,78,826	0/0:24,0:24:66.16:0,66,709	0/0:14,0:14:33.04:0,33,342	0/0:25,0:25:66.16:0,66,706	0/0:24,0:24:66.16:0,66,709	1/1:0,26:26:72.23:945,72,0	1/1:2,18:20:51.17:671,51,0	1/1:1,25:26:75.24:987,75,0	0/0:29,0:28:78.19:0,78,839	0/0:21,0:21:54.13:0,54,580	0/0:21,0:21:51.13:0,51,546	0/0:12,0:12:36.09:0,36,387
chr10	50587410	.	AC	A	1223.05	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.127;DP=808;FS=6.878;HRun=1;HaplotypeScore=113.6424;InbreedingCoeff=0.9953;MQ=90.41;MQ0=0;MQRankSum=-3.392;QD=35.97;ReadPosRankSum=3.269;VQSLOD=3.2500;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:90.30:0,90,1261	1/1:0,7:7:18.06:252,18,0	0/0:28,0:28:81.22:0,81,1239	0/0:35,0:35:99:0,105,1594	0/0:36,0:36:99:0,108,1654	0/0:30,0:30:90.31:0,90,1437	0/0:21,0:21:63.21:0,63,1004	0/0:50,0:49:99:0,144,2214	0/0:29,0:29:87.26:0,87,1341	0/0:33,0:32:99:0,99,1560	0/0:33,0:33:99:0,99,1558	0/0:33,0:33:99:0,99,1576	0/0:42,0:42:99:0,126,1987	0/0:29,0:29:87.30:0,87,1387	1/1:0,27:27:78.26:1091,78,0	0/0:32,0:32:96.31:0,96,1509	0/0:22,0:22:66.20:0,66,1029	0/0:27,0:27:78.22:0,78,1194	0/0:24,0:24:69.22:0,69,1072	0/0:33,0:33:99:0,99,1576	0/0:21,0:21:63.15:0,63,932	0/0:38,0:38:99:0,114,1819	0/0:19,0:19:56.86:0,57,872	0/0:28,0:28:81.28:0,81,1287	0/0:36,0:36:99:0,108,1720	0/0:27,0:27:81.27:0,81,1269	0/0:29,0:29:87.28:0,87,1360	0/0:9,0:9:27.09:0,27,431
chr10	50591028	.	G	GGGGGA	264.24	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=3.210;DP=306;FS=5.141;HRun=0;HaplotypeScore=77.4854;InbreedingCoeff=0.4321;MQ=81.84;MQ0=1;MQRankSum=-4.865;QD=12.58;ReadPosRankSum=-1.078;VQSLOD=2.0821;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,4:6:9.03:218,9,0	0/0:1,0:1:2.97:0,3,20	0/0:25,0:21:48.07:0,48,849	0/0:17,0:16:32.61:0,33,538	0/0:16,0:16:42.14:0,42,828	0/0:3,0:3:6.02:0,6,101	0/0:9,0:9:11.12:0,11,292	0/1:10,0:10:65.14:65,0,138	0/0:3,0:3:3:0,3,25	0/0:13,0:13:36.12:0,36,740	0/0:11,0:11:33.11:0,33,676	0/0:6,0:6:12.01:0,12,211	0/0:7,0:7:17.84:0,18,252	0/0:22,0:22:63.21:0,63,1256	0/0:6,0:6:9.70:0,10,107	1/1:0,5:5:3.01:91,3,0	0/0:23,0:23:66.23:0,66,1336	0/0:23,0:23:66.22:0,66,1297	0/0:6,0:6:14.28:0,14,139	0/0:3,0:3:8.77:0,9,134	0/0:9,0:9:14.65:0,15,160	0/0:4,0:4:12.03:0,12,204	0/0:7,0:7:20.23:0,20,267	0/0:6,0:6:14.61:0,15,148	0/0:22,0:22:60.21:0,60,1221	0/0:22,0:22:60.18:0,60,1137	0/0:3,0:3:3.01:0,3,38	0/0:18,0:18:36.09:0,36,665
chr10	50591588	.	T	TG	16552.37	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-3.079;DP=754;FS=3.576;HRun=3;HaplotypeScore=93.5137;InbreedingCoeff=0.9966;MQ=80.48;MQ0=0;MQRankSum=-5.034;QD=37.53;ReadPosRankSum=1.302;VQSLOD=4.8870;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,30:31:87.29:1218,87,0	1/1:0,8:8:18.06:252,18,0	0/0:30,0:29:84.07:0,84,964	0/0:28,0:26:63.05:0,63,716	0/0:32,0:32:96.29:0,96,1151	1/1:1,38:39:99:1553,111,0	1/1:1,19:20:57.19:797,57,0	1/1:6,37:42:99:1497,111,0	1/1:1,19:20:57.19:796,57,0	0/0:38,0:38:99:0,108,1285	0/0:27,0:27:78.22:0,78,923	1/1:0,24:24:60.20:840,60,0	1/1:3,32:35:87.29:1206,87,0	0/0:38,0:38:99:0,111,1307	1/1:1,26:27:72.24:1008,72,0	1/1:0,35:35:96.32:1343,96,0	0/0:21,0:20:60.18:0,60,719	0/0:29,0:29:73.50:0,74,963	1/1:1,21:21:63.21:881,63,0	1/1:0,27:27:75.25:1048,75,0	1/1:2,17:19:45.15:630,45,0	1/1:0,19:19:54.18:755,54,0	1/1:2,21:24:63.21:880,63,0	1/1:0,19:19:51.17:714,51,0	0/0:28,0:28:84.25:0,84,997	0/0:37,0:37:99:0,105,1260	1/1:2,27:28:81.27:1134,81,0	0/0:5,0:5:15.05:0,15,180
chr10	50592422	.	CT	C	8835.70	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=15.301;DP=755;FS=23.665;HRun=4;HaplotypeScore=72.8182;InbreedingCoeff=0.9993;MQ=80.38;MQ0=0;MQRankSum=-2.313;QD=32.72;ReadPosRankSum=1.612;VQSLOD=2.9773;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,144,1960	1/1:0,11:11:30.09:360,30,0	0/0:27,0:27:63.66:0,64,836	0/0:15,0:15:42.11:0,42,533	0/0:23,0:23:63.19:0,63,863	1/1:0,22:22:63.19:756,63,0	1/1:3,28:31:72.22:864,72,0	1/1:0,24:24:72.21:851,72,0	1/1:2,20:22:54.17:648,54,0	0/0:31,0:31:90.29:0,90,1232	0/0:15,0:15:45.15:0,45,629	0/0:27,0:27:81.25:0,81,1103	0/0:26,0:26:78.26:0,78,1091	0/0:26,0:26:75.25:0,75,1050	1/1:1,34:35:90.28:1080,90,0	0/0:34,0:34:99:0,102,1429	0/0:44,0:44:99:0,132,1846	0/0:24,0:24:72.24:0,72,1005	1/1:0,31:31:93.29:1116,93,0	1/1:1,21:22:63.19:756,63,0	1/1:1,38:39:99:1332,111,0	0/0:19,0:19:54.17:0,54,740	0/0:23,0:23:69.23:0,69,958	0/0:37,0:37:99:0,111,1531	0/0:22,0:22:66.22:0,66,918	0/0:32,0:32:90.29:0,90,1244	1/1:1,32:33:90.27:1072,90,0	0/0:9,0:9:20.95:0,21,199
chr10	50592913	.	CGTGTGT	C	2981.19	PASS	AB=1.000;AC=22;AF=0.393;AN=56;BaseQRankSum=10.511;DP=696;FS=3.394;HRun=0;HaplotypeScore=201.9736;InbreedingCoeff=0.6269;MQ=56.44;MQ0=4;MQRankSum=-11.345;QD=9.87;ReadPosRankSum=0.159;VQSLOD=2.8091;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:14.90:0,15,268	0/0:15,0:15:20.65:0,21,272	0/0:32,0:11:9.03:0,9,245	0/0:31,0:22:22.41:0,22,488	0/0:23,1:28:0.19:0,0,1487	1/1:23,0:22:27.01:256,27,0	1/1:22,0:22:7.06:97,7,0	0/1:31,0:31:32.14:115,0,32	1/1:20,0:20:29.95:281,30,0	0/0:34,0:37:78.22:0,78,2033	0/0:8,0:10:18.05:0,18,474	1/1:9,14:25:47.93:864,48,0	1/1:13,15:29:33.11:662,33,0	0/0:29,0:29:72.22:0,72,2158	0/0:39,0:39:5.56:0,6,482	0/0:22,0:22:26.86:0,27,646	0/0:37,0:44:85.13:0,85,2526	0/0:15,0:20:38.39:0,38,983	0/1:18,0:18:3.04:88,0,3	1/1:18,0:18:11.94:167,12,0	0/1:33,0:33:5.25:5,0,52	1/1:4,10:14:3.01:64,3,0	1/1:4,6:10:6.02:126,6,0	1/1:16,19:39:11.82:231,12,0	0/0:22,0:25:36.35:0,36,1182	0/0:19,0:21:56.98:0,57,1589	0/1:20,0:20:7.88:222,0,8	0/0:11,0:11:23.35:0,23,620
chr10	50592935	.	TGTGTGTGCGAGC	T	4375.19	PASS	AB=0.931;AC=15;AF=0.268;AN=56;BaseQRankSum=8.816;DP=695;FS=2.619;HRun=0;HaplotypeScore=255.6495;InbreedingCoeff=0.8184;MQ=52.57;MQ0=2;MQRankSum=-8.026;QD=24.31;ReadPosRankSum=1.580;VQSLOD=3.2956;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:15.03:0,15,341	0/0:16,0:16:20.57:0,21,354	0/0:28,0:13:39.13:0,39,1375	0/0:33,0:19:44.23:0,44,1676	0/0:30,0:30:81.25:0,81,3178	1/1:21,1:21:27.09:550,27,0	1/1:24,1:25:14.88:230,15,0	1/1:31,0:31:8.65:1328,9,0	1/1:17,0:17:33.11:623,33,0	0/0:34,0:34:96.29:0,96,4096	0/0:12,0:12:33.11:0,33,1238	0/0:24,0:24:56.79:0,57,931	0/0:28,0:28:48.32:0,48,1120	0/0:34,0:34:99:0,99,4288	0/0:39,0:39:34.31:0,34,619	0/0:29,0:29:27.08:0,27,1197	0/0:39,0:39:99:0,111,5301	0/0:18,0:18:51.15:0,51,2378	1/1:17,0:17:6.40:440,6,0	1/1:13,2:15:20.99:400,21,0	0/1:25,1:27:45.73:169,0,46	0/0:17,0:17:20.39:0,20,542	0/0:9,0:9:14.79:0,15,279	0/0:32,0:32:20.92:0,21,381	0/0:21,0:21:54.53:0,55,2489	0/0:24,0:24:72.25:0,72,3258	1/1:25,1:26:0.17:634,0,0	0/0:14,0:14:42.14:0,42,1561
chr10	50592937	.	TGTGTGCGAGC	T	7049.64	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=6.245;DP=680;FS=3.209;HRun=0;HaplotypeScore=222.9097;InbreedingCoeff=0.8974;MQ=53.79;MQ0=2;MQRankSum=-6.371;QD=33.73;ReadPosRankSum=1.193;VQSLOD=4.1460;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:12:0,12,217	0/0:15,0:15:19.91:0,20,159	0/0:27,0:14:42.14:0,42,1321	0/0:31,0:18:44.21:0,44,1541	0/0:28,0:28:75.26:0,75,2787	1/1:3,19:21:27.09:891,27,0	1/1:2,23:25:14.95:465,15,0	1/1:5,24:29:78.05:1772,78,0	1/1:2,15:17:33.11:1032,33,0	0/0:34,0:34:99:0,99,3699	0/0:13,0:13:36.11:0,36,1113	0/0:23,0:23:54.98:0,55,726	0/0:28,0:28:14.90:0,15,1012	0/0:34,0:34:99:0,99,3882	0/1:37,0:37:66.87:67,0,216	0/0:30,0:30:24.08:0,24,952	0/0:38,0:38:99:0,111,4601	0/0:18,0:18:50.91:0,51,2014	1/1:6,9:15:27.54:774,28,0	1/1:3,12:15:21.07:647,21,0	1/1:24,1:25:16.30:240,16,0	0/0:16,0:16:20.61:0,21,524	0/0:9,0:9:14.74:0,15,229	0/0:32,0:32:21.89:0,22,398	0/0:21,0:21:51.17:0,51,2085	0/0:25,0:25:75.26:0,75,2941	1/1:3,21:24:39.13:1161,39,0	0/0:14,0:14:42.09:0,42,1397
chr10	50592939	.	TGTGCGAGC	T	5411.91	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=10.769;DP=661;FS=0.000;HRun=0;HaplotypeScore=204.6504;InbreedingCoeff=0.7842;MQ=56.79;MQ0=2;MQRankSum=-8.307;QD=18.28;ReadPosRankSum=2.753;VQSLOD=3.8638;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:30:0.94:1,0,119	1/1:15,0:15:1.05:22,1,0	0/0:27,0:15:45.15:0,45,1313	0/0:31,0:19:42.68:0,43,1374	0/0:27,0:27:75.09:0,75,2307	1/1:21,1:21:27.09:599,27,0	1/1:24,1:25:14.55:291,15,0	1/1:25,1:26:75.26:1558,75,0	1/1:17,0:17:33.11:705,33,0	0/0:34,0:34:90.24:0,90,2992	0/0:13,0:13:36.11:0,36,993	0/1:22,0:22:5.25:5,0,495	0/0:28,0:28:38.20:0,38,766	0/0:36,0:36:99:0,108,3472	1/1:36,2:38:10.89:231,11,0	0/0:29,0:29:24.08:0,24,770	0/0:38,0:38:99:0,108,3849	0/0:18,0:18:49.72:0,50,1657	1/1:11,1:12:29.07:620,29,0	1/1:14,0:14:21.07:425,21,0	1/1:19,0:19:9.97:176,10,0	0/0:17,0:17:24:0,24,525	0/0:10,0:10:17.86:0,18,312	0/1:34,0:34:7.98:8,0,401	0/0:18,0:18:36.20:0,36,1678	0/0:25,0:25:75.25:0,75,2445	1/1:22,0:22:39.13:770,39,0	0/0:14,0:14:41.88:0,42,1243
chr10	50592941	.	TGCGA	T	3557.95	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=11.834;DP=671;FS=0.415;HRun=0;HaplotypeScore=176.0611;InbreedingCoeff=0.9540;MQ=58.60;MQ0=2;MQRankSum=-7.725;QD=17.02;ReadPosRankSum=2.872;VQSLOD=3.5022;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:38:5.45:0,5,67	1/1:0,13:14:17.99:302,18,0	0/0:26,0:17:51.11:0,51,887	0/0:31,0:19:47.71:0,48,890	0/0:27,0:27:65.01:0,65,1289	1/1:22,0:21:27.05:266,27,0	1/1:25,0:25:11.85:113,12,0	1/1:25,0:26:75.05:910,75,0	1/1:17,0:17:33.07:338,33,0	0/0:33,0:33:84.21:0,84,1793	0/0:13,0:13:14.12:0,14,564	0/0:22,0:22:19.30:0,19,269	0/0:29,0:29:42.91:0,43,518	0/0:36,0:36:99:0,105,2062	1/1:6,24:38:42.59:709,43,0	0/0:3,0:32:26.97:0,27,462	0/0:38,0:38:97.90:0,98,2224	0/0:18,0:18:43.56:0,44,992	1/1:12,0:12:30.05:333,30,0	1/1:14,0:14:18.02:169,18,0	1/1:17,0:19:6.96:89,7,0	0/0:17,0:17:21.74:0,22,315	0/0:10,0:10:13.55:0,14,183	0/0:35,0:35:24.37:0,24,305	0/0:17,0:17:25.16:0,25,916	0/0:26,0:26:66.09:0,66,1413	1/1:22,0:22:36.38:328,36,0	0/0:14,0:14:35.24:0,35,721
chr10	50593118	.	T	TCA	5268.83	PASS	AB=1.000;AC=22;AF=0.393;AN=56;BaseQRankSum=16.540;DP=854;FS=9.074;HRun=0;HaplotypeScore=194.4742;InbreedingCoeff=0.3998;MQ=76.62;MQ0=1;MQRankSum=-5.812;QD=10.98;ReadPosRankSum=8.105;VQSLOD=3.0906;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:49,0:49:97.15:97,0,167	1/1:18,0:18:17.10:44,17,0	0/0:29,0:28:69.17:0,69,907	0/0:25,0:24:59.78:0,60,832	0/0:25,0:25:69.22:0,69,993	1/1:20,0:20:25.33:101,25,0	0/1:36,0:36:19.16:58,0,19	0/0:40,0:40:50.98:0,51,448	0/1:27,0:27:47.81:107,0,48	0/0:29,0:29:81.27:0,81,1176	0/0:21,0:21:63.21:0,63,925	1/1:1,28:29:54.01:866,54,0	1/1:2,30:34:78.27:1294,78,0	0/0:46,0:46:99:0,132,1918	0/1:47,0:47:74.15:143,0,74	0/1:37,0:36:60.47:60,0,94	0/0:32,0:32:96.24:0,96,1340	0/0:25,1:26:23.22:0,23,925	0/0:28,0:28:31.81:0,32,165	0/1:27,0:27:15.97:31,0,16	0/1:48,0:48:24.88:25,0,156	1/1:3,23:26:48.16:794,48,0	1/1:9,14:23:15.31:563,15,0	1/1:8,26:34:63.21:1024,63,0	0/0:26,0:26:75.22:0,75,1057	0/0:21,0:21:60.19:0,60,861	0/1:25,0:25:61.07:61,0,113	0/0:26,0:26:78.26:0,78,1140
chr10	50593121	.	T	TAC	21099.06	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=9.839;DP=860;FS=7.445;HRun=0;HaplotypeScore=139.3757;InbreedingCoeff=0.9949;MQ=78.03;MQ0=1;MQRankSum=-2.292;QD=38.29;ReadPosRankSum=3.383;VQSLOD=6.6624;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,42:50:99:2080,123,0	1/1:0,18:18:51.17:867,51,0	0/0:28,0:27:54.02:0,54,649	0/0:29,0:28:59.72:0,60,724	0/0:24,0:24:60.19:0,60,779	1/1:1,20:21:48.16:815,48,0	1/1:2,32:34:81.28:1378,81,0	1/1:9,31:40:93.25:1467,93,0	1/1:3,22:25:27.22:1026,27,0	0/0:30,0:30:81.22:0,81,1034	0/0:21,0:21:57.18:0,57,741	1/1:30,0:30:60.01:919,60,0	1/1:34,0:34:76.48:1292,76,0	0/0:45,0:45:99:0,120,1544	1/1:3,41:46:99:2032,120,0	1/1:6,34:39:87.30:1477,87,0	0/0:31,0:31:87.22:0,87,1083	0/0:25,0:25:13.03:0,13,705	1/1:6,23:30:81.23:1299,81,0	1/1:2,25:27:75.26:1270,75,0	1/1:5,43:49:99:2081,123,0	1/1:25,0:25:48.16:797,48,0	1/1:23,0:23:17.25:567,17,0	1/1:37,0:37:62.75:1018,63,0	0/0:26,0:26:63.20:0,63,818	0/0:23,0:23:60.17:0,60,753	1/1:3,19:22:42.14:713,42,0	0/0:27,0:27:66.21:0,66,855
chr10	50593712	.	GACACAC	G	5801.06	PASS	AB=0.605;AC=18;AF=0.321;AN=56;BaseQRankSum=1.354;DP=687;FS=1.364;HRun=0;HaplotypeScore=176.6103;InbreedingCoeff=0.8179;MQ=57.57;MQ0=3;MQRankSum=-10.099;QD=25.00;ReadPosRankSum=1.655;VQSLOD=4.8330;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:37:52.29:0,52,1186	1/1:2,12:14:36.12:727,36,0	0/0:17,0:9:0.09:0,0,1	0/0:19,0:17:9.03:0,9,205	0/0:27,0:28:54.18:0,54,1563	0/1:12,16:31:5.61:674,0,6	1/1:12,14:26:18.06:377,18,0	1/1:17,18:34:25.61:780,26,0	0/1:7,15:23:0.13:489,0,0	0/0:21,0:21:45.13:0,45,1122	0/0:9,0:9:15.05:0,15,440	0/0:36,0:36:66.17:0,66,1020	0/0:27,0:27:47.37:0,47,740	0/0:29,0:30:69.21:0,69,1999	1/1:6,23:30:54.18:1110,54,0	0/0:43,0:43:99:0,99,2597	0/0:25,0:28:57.15:0,57,1561	0/0:23,0:23:48.16:0,48,1440	1/1:5,6:11:10.98:255,11,0	1/1:5,21:27:33.11:670,33,0	1/1:13,0:13:3.90:51,4,0	0/0:26,0:26:47.96:0,48,747	0/0:15,0:15:24.08:0,24,422	0/0:27,0:27:42.13:0,42,680	0/0:27,0:31:78.27:0,78,2249	0/0:26,0:29:74.92:0,75,1819	1/1:5,17:22:11.15:667,11,0	0/0:7,0:7:12.01:0,12,318
chr10	50593739	.	ACACT	A	1968.74	PASS	AB=0.987;AC=18;AF=0.321;AN=56;BaseQRankSum=15.227;DP=712;FS=9.792;HRun=0;HaplotypeScore=183.7570;InbreedingCoeff=0.1575;MQ=56.71;MQ0=4;MQRankSum=-7.200;QD=4.91;ReadPosRankSum=0.351;VQSLOD=1.8139;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:42,0:41:99:293,0,315	1/1:13,0:13:28.20:107,28,0	0/0:15,0:8:11.12:0,11,171	0/0:9,0:7:8.15:0,8,150	0/0:29,0:29:75.17:0,75,1595	0/1:32,0:32:70.78:71,0,238	0/1:19,0:19:38.87:39,0,52	0/0:39,0:38:35.77:0,36,655	0/1:24,0:24:86.32:86,0,107	0/0:29,0:29:78.12:0,78,1375	0/0:12,0:11:29.98:0,30,488	0/1:35,2:37:24.39:387,0,24	1/1:27,2:29:19.69:250,20,0	0/0:26,0:26:75.18:0,75,1731	0/1:31,0:30:84.79:118,0,85	0/1:48,1:49:99:171,0,974	0/0:29,0:29:69.06:0,69,1361	0/0:18,0:18:51.16:0,51,1323	0/0:14,0:14:7.66:0,8,241	0/1:29,0:29:58.72:59,0,120	0/0:13,0:13:26.04:0,26,200	1/1:28,1:29:35.46:312,35,0	0/1:15,1:16:33.99:34,0,54	1/1:28,0:28:18.44:166,18,0	0/0:40,0:40:99:0,117,2264	0/0:31,0:31:84.17:0,84,1673	0/1:23,0:23:59.10:59,0,99	0/0:7,0:7:18.01:0,18,318
chr10	50593741	.	ACT	A	4738.96	PASS	AB=0.945;AC=12;AF=0.214;AN=56;BaseQRankSum=6.322;DP=716;FS=3.338;HRun=0;HaplotypeScore=151.1716;InbreedingCoeff=0.7201;MQ=57.66;MQ0=4;MQRankSum=5.626;QD=20.78;ReadPosRankSum=-1.274;VQSLOD=4.5807;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:41,0:40:22.27:379,0,22	0/0:13,0:13:17.26:0,17,47	0/0:14,0:8:10.33:0,10,146	0/0:8,0:6:11.14:0,11,151	0/0:28,0:28:67.39:0,67,1126	0/0:32,0:32:57.04:0,57,354	0/0:19,0:19:17.07:0,17,97	0/0:40,0:39:78.01:0,78,822	0/0:24,0:24:0.48:0,0,140	0/0:32,0:32:83.62:0,84,1150	0/0:11,0:10:29.96:0,30,356	1/1:20,16:36:83.56:1037,84,0	1/1:13,15:28:71.90:861,72,0	0/0:26,0:26:65.34:0,65,1207	0/0:33,0:32:52.64:0,53,267	0/1:43,6:49:99:522,0,351	0/0:29,0:29:37.70:0,38,922	0/0:20,0:20:57.13:0,57,990	0/0:15,0:15:38.49:0,38,306	0/0:30,0:30:41.29:0,41,240	0/0:12,0:12:26.92:0,27,218	1/1:17,13:30:78.05:880,78,0	1/1:10,7:17:12.06:341,12,0	1/1:14,13:27:56.62:720,57,0	0/0:41,0:41:78.88:0,79,1573	0/0:32,0:32:60.44:0,60,1165	0/0:23,0:23:34.66:0,35,193	0/0:6,0:6:18.01:0,18,245
chr10	50593786	.	TG	T	7900.58	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=14.941;DP=743;FS=2.948;HRun=2;HaplotypeScore=99.0024;InbreedingCoeff=0.9994;MQ=83.75;MQ0=0;MQRankSum=-3.095;QD=36.08;ReadPosRankSum=3.190;VQSLOD=5.2026;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,41:41:99:1457,114,0	0/0:10,0:10:24.03:0,24,314	0/0:24,0:24:72.22:0,72,1055	0/0:23,0:23:63.21:0,63,925	0/0:29,0:29:84.28:0,84,1256	0/0:28,0:28:81.26:0,81,1193	0/0:19,0:19:45.15:0,45,674	0/0:34,0:33:96.29:0,96,1351	0/0:28,0:28:66.22:0,66,989	0/0:34,0:34:99:0,102,1512	0/0:20,0:20:57.19:0,57,852	1/1:1,32:33:90.24:1148,90,0	1/1:1,34:35:99:1263,99,0	0/0:21,0:21:60.20:0,60,898	0/0:39,0:39:99:0,99,1416	1/1:2,34:36:99:1310,102,0	0/0:28,0:28:81.18:0,81,1124	0/0:22,0:22:63.17:0,63,916	0/0:15,0:15:42.14:0,42,630	0/0:28,0:28:78.26:0,78,1167	0/0:24,0:24:69.23:0,69,1032	1/1:1,25:26:75.24:974,75,0	1/1:1,24:25:72.11:893,72,0	1/1:2,21:23:66.21:856,66,0	0/0:37,0:37:99:0,108,1600	0/0:29,0:29:87.28:0,87,1284	0/0:23,0:23:60.20:0,60,899	0/0:9,0:9:27.09:0,27,405
chr10	50594764	.	G	GTTT	12913.21	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-17.337;DP=753;FS=7.524;HRun=4;HaplotypeScore=111.0673;InbreedingCoeff=0.9998;MQ=87.13;MQ0=0;MQRankSum=-5.972;QD=52.07;ReadPosRankSum=-1.943;VQSLOD=3.4790;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,114,1723	1/1:1,9:10:27.09:584,27,0	0/0:27,0:27:72.24:0,72,1084	0/0:28,0:28:75.25:0,75,1123	0/0:26,0:26:66.22:0,66,1012	1/1:5,36:43:99:2163,99,0	1/1:3,17:22:51.18:1138,51,0	1/1:9,25:34:81.26:1759,81,0	1/1:0,23:24:63.22:1407,63,0	0/0:33,0:33:93.30:0,93,1388	0/0:28,0:28:78.26:0,78,1194	0/0:30,0:30:84.27:0,84,1266	0/0:34,0:34:99:0,99,1511	0/0:36,0:36:96.32:0,96,1469	1/1:1,25:27:63.17:1360,63,0	0/0:33,1:34:32.24:0,32,1342	0/0:25,0:25:72.20:0,72,1057	0/0:17,0:17:48.14:0,48,713	1/1:6,14:19:45.11:925,45,0	1/1:2,20:22:60.08:1163,60,0	1/1:5,13:19:36.12:804,36,0	0/0:23,0:23:69.10:0,69,1025	0/0:24,0:24:69.23:0,69,1057	0/0:22,0:22:57.15:0,57,829	0/0:21,0:21:63.21:0,63,965	0/0:39,0:39:99:0,108,1606	1/1:3,24:26:75.21:1610,75,0	0/0:20,0:20:45.14:0,45,690
chr10	50595711	.	C	CT	4933.19	PASS	AB=0.861;AC=35;AF=0.625;AN=56;BaseQRankSum=6.586;DP=710;FS=4.559;HRun=12;HaplotypeScore=99.5641;InbreedingCoeff=0.7843;MQ=72.93;MQ0=1;MQRankSum=-2.583;QD=10.43;ReadPosRankSum=0.469;VQSLOD=4.4102;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:11,28:39:22.27:535,22,0	0/1:5,5:10:3.88:128,0,4	0/0:19,1:21:9.93:0,10,149	0/1:17,0:14:5.60:6,0,31	0/0:33,0:35:75.03:0,75,532	1/1:7,2:27:34.25:227,34,0	1/1:7,2:25:40.69:234,41,0	1/1:15,3:41:61.56:368,62,0	1/1:5,0:16:19.89:100,20,0	0/0:31,0:34:77.17:0,77,541	0/0:24,0:24:37.59:0,38,260	1/1:3,4:26:38.62:217,39,0	1/1:1,2:17:34.42:200,34,0	0/0:36,0:36:80.44:0,80,589	1/1:12,28:40:3.38:518,3,0	1/1:3,20:23:44.83:438,45,0	0/0:26,0:26:59.62:0,60,438	0/1:28,3:33:9.22:9,0,414	1/1:7,7:26:58.01:406,58,0	1/1:6,5:39:96.52:580,97,0	1/1:1,0:8:17.52:86,18,0	1/1:6,3:19:32.78:214,33,0	1/1:3,2:19:37.17:220,37,0	1/1:3,1:18:34.42:200,34,0	0/0:24,2:26:30.44:0,30,387	0/0:25,0:26:61.65:0,62,440	1/1:8,1:30:47.40:247,47,0	0/0:7,0:7:17.87:0,18,131
chr10	50598048	.	C	CCTA	332.90	PASS	AB=0.684;AC=1;AF=0.018;AN=56;BaseQRankSum=-4.219;DP=609;FS=14.256;HRun=0;HaplotypeScore=86.3517;InbreedingCoeff=-0.0184;MQ=80.72;MQ0=0;MQRankSum=-4.035;QD=25.61;ReadPosRankSum=-3.397;VQSLOD=1.7825;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:87.30:0,87,1621	0/0:10,0:10:30.10:0,30,559	0/0:27,0:27:66.01:0,66,1127	0/0:7,0:7:21.07:0,21,357	0/0:26,0:26:78.22:0,78,1401	0/0:24,0:24:69.19:0,69,1236	0/0:16,0:16:48.12:0,48,858	0/0:31,0:31:93.23:0,93,1624	0/0:19,0:19:57.20:0,57,1062	0/0:32,0:32:90.27:0,90,1630	0/0:20,0:20:51.17:0,51,948	0/0:15,0:15:42.13:0,42,749	0/0:26,0:26:75.21:0,75,1350	0/0:27,0:27:81.28:0,81,1505	0/0:24,0:24:69.24:0,69,1286	0/0:24,0:24:69.19:0,69,1249	0/0:13,0:12:39.13:0,39,720	0/0:25,0:25:72.25:0,72,1325	0/0:20,0:20:57.20:0,57,1062	0/0:26,0:26:78.27:0,78,1437	0/0:9,0:9:27.09:0,27,503	0/0:24,0:24:72.25:0,72,1329	0/0:15,0:15:45.15:0,45,820	0/0:15,0:15:45.15:0,45,839	0/0:31,0:31:93.30:0,93,1675	0/0:29,0:29:87.30:0,87,1619	0/0:31,0:31:87.30:0,87,1605	0/1:7,6:13:99:407,0,299
chr10	50601256	.	C	CCA	1390.17	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-7.661;DP=728;FS=3.576;HRun=0;HaplotypeScore=83.0343;InbreedingCoeff=0.9916;MQ=87.58;MQ0=0;MQRankSum=-4.749;QD=42.13;ReadPosRankSum=1.482;VQSLOD=5.5472;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,31:33:81.28:1485,81,0	0/0:11,0:11:30.10:0,30,430	0/0:28,0:28:77.58:0,78,1030	0/0:23,0:23:54.14:0,54,722	0/0:35,0:35:99:0,105,1498	0/0:25,0:25:72.24:0,72,1032	0/0:25,0:25:69.22:0,69,967	0/0:43,0:43:99:0,111,1573	0/0:27,0:27:78.25:0,78,1097	0/0:40,0:40:99:0,114,1630	0/0:18,0:18:51.17:0,51,731	0/0:27,0:27:75.24:0,75,1054	0/0:22,0:22:63.19:0,63,882	0/0:24,0:24:72.23:0,72,1014	0/0:23,0:23:60.19:0,60,842	0/0:29,0:29:87.29:0,87,1247	0/0:18,0:18:54.18:0,54,774	0/0:16,0:16:45.15:0,45,645	0/0:23,0:23:66.21:0,66,926	0/0:26,0:26:72.24:0,72,1032	0/0:29,0:29:84.28:0,84,1194	0/0:26,0:26:78.26:0,78,1118	0/0:29,0:29:84.28:0,84,1204	0/0:30,0:30:90.29:0,90,1271	0/0:18,0:18:54.18:0,54,772	0/0:41,0:41:99:0,114,1614	0/0:33,0:33:99:0,99,1400	0/0:6,0:6:18.06:0,18,258
chr10	50605059	.	AT	A	620.10	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.762;DP=384;FS=6.115;HRun=11;HaplotypeScore=41.1057;InbreedingCoeff=0.5377;MQ=77.47;MQ0=1;MQRankSum=-0.252;QD=18.24;ReadPosRankSum=1.530;VQSLOD=4.4967;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,31:34:86.89:714,87,0	0/0:8,0:8:18.05:0,18,192	0/0:6,0:6:2.92:0,3,17	0/0:14,0:12:10.83:0,11,93	0/0:13,3:16:5.43:0,5,263	0/0:10,1:11:8.44:0,8,295	0/0:10,0:10:26.43:0,26,263	0/0:20,2:22:4.82:0,5,444	0/0:11,0:11:24.06:0,24,256	0/0:15,0:15:42.11:0,42,447	0/0:14,1:15:20.47:0,20,423	0/0:17,1:18:20.47:0,20,422	0/0:10,0:10:24.06:0,24,256	0/0:12,1:13:5.42:0,5,255	0/0:11,0:11:21.05:0,21,224	0/0:8,0:9:20.89:0,21,206	0/0:14,0:14:36.09:0,36,384	0/0:14,0:14:33.08:0,33,352	0/0:14,0:14:30.08:0,30,319	0/0:15,0:15:42.06:0,42,438	0/0:13,0:13:30.08:0,30,320	0/0:7,0:7:21.04:0,21,218	0/0:18,2:20:29.48:0,29,513	0/0:7,0:7:6.02:0,6,64	0/0:18,0:18:48.12:0,48,512	0/0:14,1:15:17.47:0,17,391	0/0:18,0:18:51.13:0,51,544	0/0:6,0:6:15.04:0,15,160
chr10	50605711	.	G	GCC	1246.50	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.671;DP=675;FS=5.123;HRun=2;HaplotypeScore=80.6674;InbreedingCoeff=0.9956;MQ=76.81;MQ0=0;MQRankSum=-4.024;QD=37.77;ReadPosRankSum=-0.214;VQSLOD=3.4108;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,27:33:75.21:1341,75,0	0/0:8,0:8:24.08:0,24,353	0/0:12,0:12:33.11:0,33,468	0/0:22,0:22:59.86:0,60,820	0/0:21,0:21:60.16:0,60,859	0/0:25,0:25:75.24:0,75,1083	0/0:20,0:20:54.12:0,54,750	0/0:34,0:34:96.32:0,96,1411	0/0:29,0:29:81.27:0,81,1191	0/0:25,0:25:75.25:0,75,1104	0/0:16,0:16:48.14:0,48,686	0/0:22,0:22:66.22:0,66,972	0/0:22,0:22:60.20:0,60,883	0/0:33,0:33:96.32:0,96,1412	0/0:40,0:40:99:0,117,1702	0/0:28,0:28:81.27:0,81,1193	0/0:16,0:16:45.15:0,45,663	0/0:19,0:19:57.19:0,57,836	0/0:13,0:13:39.12:0,39,554	0/0:28,0:28:81.27:0,81,1192	0/0:22,0:22:63.21:0,63,928	0/0:20,0:20:54.18:0,54,792	0/0:27,0:27:81.24:0,81,1148	0/0:31,0:31:90.30:0,90,1323	0/0:27,0:27:81.26:0,81,1174	0/0:35,0:35:99:0,102,1481	0/0:37,0:36:99:0,108,1590	0/0:10,0:10:24.08:0,24,353
chr10	50607606	.	CTG	C	1346.46	PASS	AB=1.000;AC=21;AF=0.404;AN=52;BaseQRankSum=9.674;DP=659;FS=5.340;HRun=0;HaplotypeScore=150.2601;InbreedingCoeff=0.8755;MQ=47.80;MQ0=36;MQRankSum=-1.760;QD=4.99;ReadPosRankSum=-2.984;VQSLOD=2.2785;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:36:4.49:0,4,45	1/1:5,0:5:3.37:17,3,0	./.	./.	0/0:22,0:22:48.08:0,48,565	1/1:26,1:26:19.21:100,19,0	1/1:27,0:23:16.74:123,17,0	1/1:39,0:36:36.02:247,36,0	1/1:13,0:13:8.11:52,8,0	0/0:31,0:27:74.75:0,75,1026	0/0:19,0:18:29.90:0,30,350	0/0:29,0:26:16.94:0,17,253	0/0:15,0:14:12.47:0,12,218	0/0:27,1:28:72.21:0,72,1156	0/1:33,0:32:1.34:110,0,1	1/1:16,1:17:30.51:294,31,0	0/0:43,0:43:83.97:0,84,1538	0/0:20,0:20:35.12:0,35,475	1/1:19,0:16:19.09:122,19,0	1/1:30,0:29:20.10:145,20,0	1/1:39,0:29:26.69:217,27,0	0/0:22,1:23:15.48:0,15,170	0/0:25,0:23:27.18:0,27,349	0/0:22,0:19:11.90:0,12,140	0/0:31,0:30:39.88:0,40,817	0/0:27,0:25:60.88:0,61,823	1/1:21,0:21:13.71:123,14,0	0/0:6,0:6:17.21:0,17,179
chr10	50607620	.	CTCTCTGTGTGTGTGTGTGTG	C	707.80	PASS	AB=0.929;AC=6;AF=0.115;AN=52;BaseQRankSum=5.145;DP=636;FS=4.980;HRun=0;HaplotypeScore=298.6806;InbreedingCoeff=0.0270;MQ=46.87;MQ0=36;MQRankSum=-4.303;QD=7.15;ReadPosRankSum=-2.492;VQSLOD=1.7453;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,30:35:0.37:1,0,0	0/1:3,0:5:26.71:190,0,27	./.	./.	0/0:22,0:22:54.19:0,54,3009	0/0:28,0:27:46.35:0,46,1037	0/0:27,0:23:33.37:0,33,666	0/0:34,0:32:68.10:0,68,1076	0/0:16,0:14:20.78:0,21,443	0/0:31,0:27:75.69:0,76,3105	0/0:15,0:14:27.09:0,27,1332	0/1:27,0:24:99:275,0,183	0/1:11,0:10:99:173,0,154	0/0:33,0:33:80.88:0,81,4468	0/0:32,0:31:49.48:0,49,487	0/1:16,0:16:99:177,0,209	0/0:39,0:39:99:0,117,5671	0/0:19,0:19:36.12:0,36,1906	0/0:16,0:13:30.89:0,31,870	0/0:25,0:24:17.68:0,18,334	0/0:38,0:27:40.20:0,40,1410	0/0:25,0:25:3.71:0,4,94	0/0:28,0:25:15.46:0,15,307	0/0:19,0:16:6.02:0,6,99	0/0:29,0:28:70.79:0,71,3800	0/0:31,0:29:87.26:0,87,3408	0/0:22,0:22:18.47:0,18,600	0/0:7,0:6:15.05:0,15,821
chr10	50607624	.	CTGTG	C	1138.47	PASS	AB=0.918;AC=36;AF=0.692;AN=52;BaseQRankSum=5.790;DP=635;FS=1.421;HRun=0;HaplotypeScore=162.2853;InbreedingCoeff=0.0422;MQ=46.94;MQ0=38;MQRankSum=-3.208;QD=1.91;ReadPosRankSum=-1.109;VQSLOD=2.7138;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:41,0:35:1.25:3,1,0	1/1:4,0:5:6.01:63,6,0	./.	./.	0/1:21,0:22:10.25:10,0,430	1/1:20,1:27:2.83:46,3,0	1/1:24,0:21:8.63:126,9,0	0/1:33,0:30:8.51:59,0,9	0/1:10,0:14:0:0,0,0	0/1:29,2:27:74.98:75,0,464	0/1:14,0:13:0.95:1,0,248	1/1:30,0:27:8.09:71,8,0	1/1:11,0:10:6.01:58,6,0	0/0:32,0:32:0.68:0,1,688	0/1:19,0:28:0.14:0,0,0	1/1:16,0:16:5.99:50,6,0	0/1:42,0:43:59.57:60,0,927	0/1:10,1:18:23.49:23,0,214	1/1:13,4:13:8.88:89,9,0	1/1:13,10:23:2.84:17,3,0	1/1:36,0:25:20.83:280,21,0	0/1:26,0:26:0.02:0,0,0	1/1:29,0:26:0.57:2,1,0	0/1:20,0:18:0:0,0,0	0/1:29,0:29:13.34:13,0,667	0/1:28,0:27:67.48:67,0,347	1/1:3,17:22:11.40:154,11,0	0/0:7,0:6:9.01:0,9,158
chr10	50607657	.	TGTGTGTGTGCGCGCGC	T	594.38	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=6.290;DP=617;FS=1.124;HRun=0;HaplotypeScore=213.9712;InbreedingCoeff=0.7427;MQ=49.36;MQ0=26;MQRankSum=-6.166;QD=4.64;ReadPosRankSum=-0.645;VQSLOD=2.5428;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:50:11.04:0,11,200	1/1:5,0:5:6.02:96,6,0	0/0:13,0:3:9.03:0,9,210	0/0:9,0:1:1.25:0,1,3	0/0:20,0:20:54.19:0,54,3041	0/0:25,0:24:31.35:0,31,1029	0/0:23,0:19:35.40:0,35,1456	0/0:21,0:20:51.03:0,51,1343	0/0:11,0:9:5.84:0,6,196	0/0:34,0:29:70.56:0,71,2992	0/0:11,0:11:27.09:0,27,1524	1/1:28,0:26:9.03:186,9,0	1/1:11,0:11:6.49:172,6,0	0/0:28,0:28:56.94:0,57,2754	0/0:19,0:18:12.04:0,12,316	1/1:4,9:13:6.02:268,6,0	0/0:35,0:35:99:0,99,5628	0/0:22,0:22:42.13:0,42,1958	0/0:13,0:12:24.08:0,24,998	0/0:20,0:20:21.02:0,21,691	0/0:35,0:29:53.91:0,54,1746	1/1:23,0:23:1.49:3,1,0	1/1:21,0:20:3.14:9,3,0	0/1:27,0:25:0:0,0,0	0/0:37,0:33:78.27:0,78,4324	0/0:27,0:26:56.41:0,56,3009	0/0:25,0:25:24.50:0,25,801	0/0:7,0:7:18.06:0,18,979
chr10	50607659	.	TGTGTGTGC	T	505.59	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=6.630;DP=614;FS=0.000;HRun=0;HaplotypeScore=160.7830;InbreedingCoeff=0.6599;MQ=49.78;MQ0=22;MQRankSum=-4.732;QD=4.14;ReadPosRankSum=0.690;VQSLOD=1.9253;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:50:15.05:0,15,114	1/1:5,0:5:6.02:72,6,0	0/0:13,0:3:5.96:0,6,45	0/0:10,0:2:5.52:0,6,25	0/0:20,0:20:36.93:0,37,1391	0/0:26,0:25:37.60:0,38,281	0/0:21,0:18:25.95:0,26,291	0/0:21,0:20:45.96:0,46,385	0/0:12,0:10:11.94:0,12,91	0/0:35,0:31:54.20:0,54,1461	0/0:11,0:11:27:0,27,731	1/1:22,4:25:8.73:228,9,0	1/1:11,0:11:6.47:141,6,0	0/0:28,0:28:66.09:0,66,1701	0/0:18,0:18:11.69:0,12,81	1/1:11,0:12:8.99:121,9,0	0/0:35,0:35:87.92:0,88,2699	0/0:23,0:23:51.02:0,51,874	0/0:14,0:13:29.94:0,30,320	0/0:20,0:20:19.27:0,19,153	0/0:35,0:30:56.56:0,57,442	1/1:20,2:22:0.47:1,0,0	1/1:20,1:20:1.61:4,2,0	0/0:25,2:25:0:0,0,0	0/0:38,0:34:85.71:0,86,2073	0/0:24,0:23:11.62:0,12,1261	0/1:25,0:25:83:83,0,139	0/0:7,0:7:17.97:0,18,403
chr10	50608192	.	CT	C	641.91	PASS	AB=0.909;AC=3;AF=0.054;AN=56;BaseQRankSum=3.482;DP=719;FS=1.123;HRun=11;HaplotypeScore=103.6904;InbreedingCoeff=0.6409;MQ=77.89;MQ0=0;MQRankSum=0.333;QD=11.46;ReadPosRankSum=0.450;VQSLOD=3.3069;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:40:99:0,102,1029	0/0:8,0:8:17.09:0,17,87	0/1:18,2:20:21.56:22,0,141	0/0:20,1:21:21.88:0,22,234	0/0:22,1:24:41.31:0,41,611	0/0:25,0:25:41.52:0,42,640	0/0:23,2:25:38.47:0,38,591	0/0:31,1:33:53.38:0,53,751	0/0:25,0:26:63:0,63,638	0/0:19,0:19:45.11:0,45,480	0/0:14,0:14:30.05:0,30,310	0/0:27,1:28:32.08:0,32,294	0/0:16,0:16:37.32:0,37,205	0/0:45,1:49:86.12:0,86,1051	0/0:44,2:46:34.83:0,35,417	1/1:2,32:36:90.97:726,91,0	0/0:19,1:20:26.48:0,26,485	0/0:16,0:16:42.09:0,42,439	0/0:31,0:33:77.82:0,78,773	0/0:22,0:22:47.19:0,47,542	0/0:29,0:29:40.89:0,41,618	0/0:16,0:16:45.90:0,46,253	0/0:21,0:21:33.01:0,33,260	0/0:29,0:29:70.54:0,71,367	0/0:23,2:26:39.22:0,39,592	0/0:31,0:32:59.97:0,60,610	0/0:28,1:29:44.52:0,45,671	0/0:15,1:16:23.40:0,23,426
chr10	50608458	.	A	ACAAACAAACAAG	41090.31	PASS	AB=0.804;AC=30;AF=0.536;AN=56;BaseQRankSum=-5.474;DP=763;FS=3.703;HRun=0;HaplotypeScore=211.2379;InbreedingCoeff=0.8484;MQ=62.47;MQ0=0;MQRankSum=-17.506;QD=86.69;ReadPosRankSum=-1.907;VQSLOD=4.4988;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:22,8:44:66.22:3022,66,0	0/0:15,0:15:36.12:0,36,1135	0/0:20,0:20:35.05:0,35,730	0/0:23,0:19:29.66:0,30,580	0/0:27,0:27:47.84:0,48,2032	1/1:11,17:30:57.13:3026,57,0	1/1:16,10:38:54.18:2824,54,0	1/1:38,0:38:99:3404,99,0	1/1:6,15:29:33.11:1970,33,0	0/0:21,0:21:48.16:0,48,1576	0/0:17,0:17:48.16:0,48,1585	1/1:13,16:39:63.22:3535,63,0	1/1:12,11:28:54.19:2605,54,0	0/0:26,0:26:69.22:0,69,2279	0/0:34,0:34:87.30:0,87,2992	0/1:17,22:48:14.75:4719,0,15	0/0:38,0:38:99:0,102,3178	0/1:14,0:14:67.22:67,0,814	1/1:9,10:26:69.15:2826,69,0	1/1:14,15:37:66.21:3215,66,0	1/1:6,2:14:9.03:538,9,0	1/1:9,7:18:33.11:1671,33,0	1/1:11,9:24:54.12:2704,54,0	1/1:8,5:17:18.06:1049,18,0	0/0:29,0:29:78.27:0,78,2516	0/0:31,0:31:78.25:0,78,2488	1/1:8,20:30:69.24:3916,69,0	0/0:8,0:8:18.06:0,18,533
chr10	50609651	.	G	GA	2822.50	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-10.527;DP=648;FS=7.740;HRun=8;HaplotypeScore=62.5787;InbreedingCoeff=0.9910;MQ=75.17;MQ0=0;MQRankSum=0.036;QD=25.66;ReadPosRankSum=1.671;VQSLOD=4.4602;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:75.02:0,75,680	0/0:8,0:8:24.01:0,24,220	0/0:20,0:18:38.99:0,39,351	0/0:23,0:20:14.90:0,15,223	0/0:31,0:31:90.05:0,90,824	0/0:27,0:27:75.04:0,75,686	0/0:19,0:19:51.02:0,51,467	0/0:44,0:44:90:0,90,817	0/0:26,1:27:43.41:0,43,647	0/0:26,0:26:60.02:0,60,549	0/0:20,0:20:60.02:0,60,544	1/1:4,20:24:51.15:588,51,0	1/1:0,15:15:42.12:482,42,0	0/0:16,0:16:39:0,39,352	0/0:25,0:25:69.01:0,69,626	0/0:30,0:30:78.01:0,78,705	0/0:14,0:14:32.68:0,33,301	0/0:7,0:7:15:0,15,137	0/0:17,0:17:27.04:0,27,387	0/0:35,0:35:87.04:0,87,794	0/0:22,0:22:63.03:0,63,577	1/1:1,21:22:60.14:678,60,0	1/1:2,22:24:63.19:723,63,0	1/1:8,17:25:23.68:527,24,0	0/0:23,0:23:53.99:0,54,488	0/0:33,0:33:87.04:0,87,792	0/0:34,0:34:99:0,102,900	0/0:10,0:10:30.02:0,30,275
chr10	50610337	.	A	ATG	2274.33	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-0.603;DP=688;FS=0.568;HRun=0;HaplotypeScore=83.6165;InbreedingCoeff=0.9964;MQ=79.73;MQ0=0;MQRankSum=-2.990;QD=40.61;ReadPosRankSum=1.747;VQSLOD=5.1368;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:90.28:0,90,1215	1/1:2,10:12:21.07:372,21,0	0/0:18,0:18:39:0,39,481	0/0:16,0:16:45.11:0,45,588	0/0:22,0:22:60.19:0,60,805	0/0:22,0:22:60.20:0,60,823	0/0:12,0:12:30.07:0,30,378	0/0:41,0:41:96.27:0,96,1261	0/0:28,0:28:78.26:0,78,1070	0/0:20,0:20:57.19:0,57,783	0/0:22,0:22:66.22:0,66,905	0/0:17,0:17:48.13:0,48,625	0/0:28,0:28:84.25:0,84,1117	0/0:22,0:22:57.17:0,57,764	1/1:1,43:44:99:2022,114,0	0/0:47,0:47:99:0,132,1794	0/0:19,0:19:51.13:0,51,664	0/0:17,0:17:41.72:0,42,555	0/0:17,0:17:35.92:0,36,445	0/0:21,0:21:60.20:0,60,822	0/0:28,0:28:84.23:0,84,1103	0/0:29,0:29:75.24:0,75,1014	0/0:28,0:28:78.24:0,78,1053	0/0:15,0:15:42.12:0,42,559	0/0:27,0:27:72.19:0,72,935	0/0:30,0:30:87.28:0,87,1179	0/0:42,0:42:99:0,123,1689	0/0:8,0:8:24.05:0,24,310
chr10	50611156	.	G	GGAA	20906.70	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=-16.146;DP=705;FS=4.029;HRun=0;HaplotypeScore=89.7742;InbreedingCoeff=0.9998;MQ=63.25;MQ0=4;MQRankSum=-5.489;QD=49.08;ReadPosRankSum=-0.266;VQSLOD=6.9311;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:66.21:0,66,999	1/1:2,10:12:30.10:644,30,0	0/0:26,0:23:60.20:0,60,886	0/0:25,0:24:54.18:0,54,822	0/0:30,0:30:78.26:0,78,1207	1/1:2,25:28:63.22:1337,63,0	1/1:9,21:30:57.16:1180,57,0	1/1:9,23:32:75.25:1547,75,0	1/1:2,16:18:42.14:901,42,0	0/0:24,0:24:63.21:0,63,955	0/0:28,0:28:69.23:0,69,1067	1/1:5,17:22:54.19:1159,54,0	1/1:5,25:30:78.23:1629,78,0	0/0:20,0:20:54.17:0,54,815	1/1:8,30:39:84.29:1802,84,0	1/1:1,32:34:93.32:1997,93,0	0/0:32,0:32:84.27:0,84,1277	0/0:19,0:19:48.16:0,48,743	1/1:8,13:21:39.10:794,39,0	1/1:4,24:30:75.26:1544,75,0	1/1:3,30:33:75.17:1560,75,0	1/1:2,21:23:60.21:1287,60,0	1/1:2,13:19:38.60:836,39,0	1/1:3,21:24:51.10:1095,51,0	0/0:21,0:21:57.17:0,57,858	0/0:20,0:20:57.17:0,57,841	1/1:3,26:30:75.26:1595,75,0	0/0:10,0:10:27.09:0,27,416
chr10	50611331	.	C	CT	16001.68	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-13.259;DP=745;FS=7.611;HRun=4;HaplotypeScore=71.8437;InbreedingCoeff=0.9994;MQ=77.21;MQ0=0;MQRankSum=-5.226;QD=35.25;ReadPosRankSum=2.128;VQSLOD=5.3729;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,33:34:96.32:1313,96,0	1/1:1,8:9:20.93:259,21,0	0/0:32,0:33:80.79:0,81,875	0/0:20,0:20:54.14:0,54,596	0/0:36,0:36:93.26:0,93,1054	1/1:4,24:28:63.21:861,63,0	1/1:3,22:25:60.20:820,60,0	1/1:3,31:34:93.30:1251,93,0	1/1:0,25:25:63.21:859,63,0	0/0:35,0:35:96.24:0,96,1059	0/0:26,0:26:75.20:0,75,840	1/1:1,21:22:57.19:776,57,0	1/1:3,30:33:84.28:1143,84,0	0/0:28,0:28:81.18:0,81,888	1/1:2,24:25:69.23:943,69,0	1/1:1,29:30:84.28:1149,84,0	0/0:25,0:25:72.19:0,72,807	0/0:22,0:21:63.18:0,63,714	1/1:2,32:34:96.25:1260,96,0	1/1:1,19:20:54.18:738,54,0	1/1:0,25:25:69.23:943,69,0	1/1:3,24:27:69.23:941,69,0	1/1:1,20:21:54.18:736,54,0	1/1:1,19:20:51.17:698,51,0	0/0:20,0:20:51.15:0,51,578	0/0:33,0:33:87.22:0,87,963	1/1:4,37:40:96.32:1312,96,0	0/0:13,0:13:36.10:0,36,405
chr10	50611670	.	G	GA	781.86	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-7.619;DP=591;FS=4.074;HRun=4;HaplotypeScore=90.2962;InbreedingCoeff=0.9974;MQ=91.58;MQ0=0;MQRankSum=-2.867;QD=30.07;ReadPosRankSum=0.038;VQSLOD=3.5618;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:66.19:0,66,749	1/1:2,10:12:24.08:328,24,0	0/0:22,0:22:54.14:0,54,607	0/0:29,0:29:77.56:0,78,798	0/0:32,0:32:90.25:0,90,1020	0/0:23,0:23:57.16:0,57,647	0/0:17,0:17:45.11:0,45,500	0/0:25,0:25:69.19:0,69,782	0/0:18,0:18:45.11:0,45,510	0/0:19,0:18:48.14:0,48,544	0/0:16,0:16:36.10:0,36,408	0/0:27,0:27:72.20:0,72,815	0/0:24,0:24:66.19:0,66,748	0/0:22,0:22:66.19:0,66,748	1/1:0,14:14:42.14:575,42,0	0/0:28,0:28:78.22:0,78,885	0/0:23,0:23:57.16:0,57,647	0/0:12,0:12:36.10:0,36,408	0/0:19,0:19:54.15:0,54,612	0/0:16,0:16:39.11:0,39,442	0/0:22,0:22:57.15:0,57,637	0/0:28,0:28:75.21:0,75,851	0/0:24,0:24:69.20:0,69,782	0/0:10,0:10:24.07:0,24,272	0/0:21,0:21:57.16:0,57,647	0/0:26,0:26:78.21:0,78,876	0/0:29,0:29:72.20:0,72,816	0/0:10,0:10:30.09:0,30,340
chr10	50611741	.	CAATT	C	7017.31	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=10.502;DP=585;FS=1.184;HRun=0;HaplotypeScore=112.5740;InbreedingCoeff=0.9976;MQ=83.60;MQ0=0;MQRankSum=-6.418;QD=43.86;ReadPosRankSum=0.385;VQSLOD=4.9110;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,120,3286	0/0:9,0:9:27.09:0,27,706	0/0:28,0:28:69.24:0,69,1741	0/0:19,0:19:46.34:0,46,1179	0/0:18,0:18:54.19:0,54,1381	1/1:0,24:24:60.21:1137,60,0	1/1:1,20:21:48.16:870,48,0	1/1:3,18:21:54.15:963,54,0	1/1:1,15:16:39.09:756,39,0	0/0:27,0:27:78.27:0,78,2108	0/0:9,0:9:24.08:0,24,616	0/0:18,0:18:51.16:0,51,1330	0/0:26,0:26:78.27:0,78,2084	0/0:30,0:30:87.30:0,87,2346	0/0:27,0:27:78.27:0,78,2137	0/0:32,0:32:90.31:0,90,2423	0/0:19,0:19:54.16:0,54,1377	0/0:12,0:12:33.11:0,33,889	1/1:0,15:15:42.11:701,42,0	1/1:2,10:12:24.08:393,24,0	1/1:2,18:20:36.12:648,36,0	0/0:19,0:19:51.17:0,51,1220	0/0:11,0:11:30.10:0,30,817	0/0:27,0:27:81.28:0,81,2166	0/0:22,0:22:63.19:0,63,1608	0/0:24,0:24:66.22:0,66,1753	1/1:1,30:31:84.29:1549,84,0	0/0:6,0:6:18.06:0,18,493
chr10	50612748	.	ACAACGTT	A	3514.67	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=10.564;DP=774;FS=3.500;HRun=0;HaplotypeScore=179.5180;InbreedingCoeff=0.9916;MQ=86.22;MQ0=0;MQRankSum=-10.011;QD=63.90;ReadPosRankSum=1.680;VQSLOD=3.9038;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,123,4703	1/1:0,13:13:36.59:950,37,0	0/0:17,0:17:30.48:0,30,1529	0/0:37,0:37:99:0,108,3370	0/0:24,0:24:69.22:0,69,2523	0/0:24,0:23:72.23:0,72,2672	0/0:31,0:31:93.22:0,93,3169	0/0:39,0:39:99:0,117,4478	0/0:24,0:24:72.25:0,72,2632	0/0:27,0:27:72.24:0,72,2654	0/0:28,0:28:84.29:0,84,3380	0/0:22,0:22:66.21:0,66,2436	0/0:27,0:27:78.27:0,78,2938	0/0:36,0:36:99:0,105,4088	1/1:5,37:42:99:2565,99,0	0/0:33,0:33:99:0,99,3506	0/0:22,0:22:63.21:0,63,2335	0/0:26,0:26:78.27:0,78,2969	0/0:21,0:21:60.20:0,60,2268	0/0:28,0:28:81.28:0,81,3210	0/0:31,0:31:90.27:0,90,3332	0/0:27,0:27:81.27:0,81,3126	0/0:25,0:25:72.25:0,72,2735	0/0:39,0:39:99:0,114,4470	0/0:26,0:26:78.27:0,78,3015	0/0:24,0:24:72.24:0,72,2799	0/0:35,0:35:99:0,99,3893	0/0:5,0:5:15.05:0,15,596
chr10	50613507	.	TCACACACACACA	T	1853.10	PASS	AB=0.821;AC=15;AF=0.300;AN=50;BaseQRankSum=3.369;DP=660;FS=4.399;HRun=0;HaplotypeScore=206.5429;InbreedingCoeff=0.2857;MQ=58.39;MQ0=16;MQRankSum=-1.703;QD=6.37;ReadPosRankSum=-0.194;VQSLOD=2.4431;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:31,0:32:18.39:18,0,106	./.	./.	./.	0/0:26,0:27:36.02:0,36,1587	0/1:19,16:34:18.53:196,0,19	1/1:28,0:28:3.21:125,3,0	0/1:34,0:33:23.95:24,0,36	0/1:8,9:19:11.94:471,0,12	0/0:20,0:19:23.97:0,24,853	0/0:17,0:17:26.98:0,27,915	0/0:17,0:26:17.84:0,18,154	0/0:3,0:10:17.74:0,18,213	0/0:20,0:20:27.52:0,28,1170	1/1:18,0:21:9.03:251,9,0	1/1:33,0:33:11.43:273,11,0	0/0:29,0:29:51.99:0,52,1938	0/0:26,0:24:36.03:0,36,1189	0/1:13,5:18:17.32:145,0,17	0/1:14,6:19:13.95:198,0,14	0/1:26,0:28:2.53:125,0,3	0/0:15,0:15:20.74:0,21,313	0/0:8,0:14:14.39:0,14,121	0/0:14,0:27:17.98:0,18,166	0/0:31,0:30:32.29:0,32,1373	0/0:22,0:22:30.05:0,30,963	1/1:9,12:22:3.25:184,3,0	0/0:8,0:8:17.99:0,18,817
chr10	50613532	.	CACACACACACACACACACACAT	C	807.11	PASS	AB=0.891;AC=3;AF=0.054;AN=56;BaseQRankSum=3.241;DP=653;FS=2.986;HRun=0;HaplotypeScore=293.6312;InbreedingCoeff=-0.0534;MQ=50.67;MQ0=24;MQRankSum=-3.955;QD=12.81;ReadPosRankSum=-0.144;VQSLOD=2.2307;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:33:45.65:0,46,1486	0/0:1,0:1:3.01:0,3,53	0/1:13,0:4:0.85:1,0,17	0/0:36,0:14:18.02:0,18,386	0/0:25,0:25:45.15:0,45,3321	0/0:27,0:26:15.03:0,15,387	0/0:21,0:21:32.99:0,33,748	0/0:28,0:25:39.17:0,39,847	0/0:20,0:20:33.03:0,33,623	0/0:22,0:20:56.81:0,57,2956	0/0:16,0:16:32.49:0,32,2045	0/0:23,0:22:23.80:0,24,585	0/0:14,0:13:27.08:0,27,1187	0/0:24,0:24:51.27:0,51,2972	0/1:21,0:21:99:378,0,227	0/1:15,14:29:99:517,0,256	0/0:34,0:34:82.79:0,83,4839	0/0:24,0:22:57.12:0,57,2874	0/0:18,0:17:36.88:0,37,970	0/0:22,0:20:24.05:0,24,398	0/0:41,0:39:54.04:0,54,1524	0/0:22,0:22:42.60:0,43,1642	0/0:21,0:21:27:0,27,819	0/0:37,0:36:37.48:0,37,1190	0/0:26,0:25:59.52:0,60,3624	0/0:21,0:20:57.19:0,57,3398	0/0:24,0:23:4.97:0,5,667	0/0:9,0:9:27.09:0,27,1874
chr10	50613596	.	AT	A	610.98	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.633;DP=564;FS=4.258;HRun=10;HaplotypeScore=67.7452;InbreedingCoeff=0.9864;MQ=73.07;MQ0=0;MQRankSum=-0.101;QD=19.09;ReadPosRankSum=1.011;VQSLOD=4.6077;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,1:31:55.04:0,55,800	1/1:0,6:6:17.92:148,18,0	0/0:12,0:12:22.97:0,23,243	0/0:13,0:13:30.03:0,30,309	0/0:22,0:22:66.07:0,66,697	0/0:27,0:27:78.21:0,78,863	0/0:24,0:24:69.18:0,69,755	0/0:31,1:32:54.79:0,55,723	0/0:16,0:16:30.02:0,30,316	0/0:14,0:14:33.09:0,33,365	0/0:17,1:18:25.07:0,25,496	0/0:12,0:12:27.07:0,27,299	0/0:11,0:11:27.07:0,27,299	0/0:21,0:21:54.08:0,54,562	1/1:2,24:26:68.86:583,69,0	0/0:16,0:16:21.01:0,21,211	0/0:29,0:29:75.15:0,75,806	0/0:16,0:16:48.13:0,48,531	0/0:21,0:22:65.99:0,66,701	0/0:23,0:23:55.39:0,55,601	0/0:23,0:23:50.99:0,51,510	0/0:17,0:17:45.07:0,45,476	0/0:19,0:19:54.07:0,54,582	0/0:20,0:20:48.11:0,48,522	0/0:22,1:23:40.03:0,40,639	0/0:25,1:26:49.14:0,49,763	0/0:30,0:30:77.24:0,77,834	0/0:14,1:15:19.07:0,19,439
chr10	50613916	.	AT	A	1813.32	PASS	AB=0.973;AC=30;AF=0.536;AN=56;BaseQRankSum=9.312;DP=549;FS=3.341;HRun=6;HaplotypeScore=90.5287;InbreedingCoeff=0.7742;MQ=71.25;MQ0=8;MQRankSum=-3.092;QD=6.48;ReadPosRankSum=0.900;VQSLOD=0.0071;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:10,12:22:44.88:401,45,0	0/0:6,0:6:1.82:0,2,4	0/1:49,2:20:7.58:8,0,220	0/0:48,2:26:7.97:0,8,275	0/0:28,0:28:81.60:0,82,993	1/1:14,0:14:24.39:115,24,0	1/1:14,0:14:30.43:133,30,0	1/1:25,0:25:38.02:266,38,0	1/1:10,0:10:13.43:81,13,0	0/0:19,0:19:49.38:0,49,583	0/0:22,0:22:57.16:0,57,712	1/1:16,0:16:24.82:87,25,0	1/1:10,0:10:21.90:110,22,0	0/0:8,0:8:21.07:0,21,274	0/0:26,0:26:13.50:0,13,51	1/1:16,0:16:25.58:88,26,0	0/0:25,0:25:68:0,68,819	0/0:13,0:13:36.10:0,36,447	1/1:19,0:19:29.87:211,30,0	1/1:17,0:17:4.14:76,4,0	1/1:5,0:5:5.74:36,6,0	0/1:17,0:17:12.47:109,0,12	1/1:13,0:13:3.97:43,4,0	1/1:14,0:14:28.88:130,29,0	0/0:25,0:25:63.18:0,63,789	0/0:31,0:31:84.22:0,84,1025	1/1:15,0:15:25.72:133,26,0	0/0:14,0:14:36.11:0,36,459
chr10	50613921	.	T	TA	2177.32	PASS	AB=1.000;AC=24;AF=0.429;AN=56;BaseQRankSum=5.137;DP=587;FS=2.271;HRun=0;HaplotypeScore=95.1457;InbreedingCoeff=0.7996;MQ=72.15;MQ0=12;MQRankSum=0.306;QD=11.22;ReadPosRankSum=3.522;VQSLOD=4.0768;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:30.08:0,30,117	0/0:7,0:7:9.35:0,9,34	0/0:72,0:24:43.99:0,44,500	0/0:75,0:33:67.35:0,67,592	0/0:30,0:30:87.23:0,87,1161	1/1:3,12:15:16.13:312,16,0	1/1:0,14:15:35.67:341,36,0	1/1:9,13:24:16.90:347,17,0	1/1:3,9:12:13.41:190,13,0	0/0:18,0:18:51.17:0,51,709	0/0:21,0:21:60.19:0,60,823	1/1:15,0:15:28.96:129,29,0	0/1:11,0:11:9.67:44,0,10	0/0:9,0:9:24.06:0,24,316	0/0:27,0:27:49.58:0,50,182	0/0:14,0:14:34.06:0,34,146	0/0:25,0:25:75.22:0,75,987	0/0:12,0:12:36.12:0,36,493	1/1:7,10:20:30.43:288,30,0	1/1:1,15:16:23.27:319,23,0	1/1:2,5:7:1.70:27,2,0	0/1:17,0:18:20.90:44,0,21	1/1:13,0:13:10.67:86,11,0	1/1:13,0:13:8.06:69,8,0	0/0:23,0:23:66.19:0,66,888	0/0:30,0:30:87.27:0,87,1180	1/1:3,12:15:17.62:196,18,0	0/0:12,0:12:36.12:0,36,502
chr10	50613922	.	TA	T	537.74	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=2.229;DP=592;FS=5.858;HRun=10;HaplotypeScore=101.4365;InbreedingCoeff=0.9201;MQ=72.56;MQ0=12;MQRankSum=-1.072;QD=10.34;ReadPosRankSum=1.701;VQSLOD=2.8737;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:18:10.40:48,10,0	1/1:0,7:7:12:104,12,0	0/0:75,0:26:50.55:0,51,464	0/0:76,0:33:58.79:0,59,403	0/0:27,2:29:34.78:0,35,737	0/0:14,0:15:40.19:0,40,233	0/0:15,0:15:34.12:0,34,172	0/0:23,0:23:51.80:0,52,294	0/0:11,0:12:22.90:0,23,121	0/0:17,1:18:13.02:0,13,359	0/0:21,0:21:52.68:0,53,560	0/0:15,0:15:32.26:0,32,194	0/0:10,0:10:17.75:0,18,121	0/0:9,0:9:26.79:0,27,261	1/1:1,26:27:59.99:520,60,0	0/0:14,0:14:38.14:0,38,230	0/0:25,0:25:36.96:0,37,571	0/0:12,0:12:33.05:0,33,351	0/0:21,0:21:43.10:0,43,239	0/0:16,0:16:46.36:0,46,277	0/0:7,0:7:5.84:0,6,40	0/0:18,0:18:26.94:0,27,251	0/0:14,0:14:35.16:0,35,238	0/0:13,0:13:26.53:0,27,168	0/0:25,0:25:66.11:0,66,692	0/0:30,0:30:71.74:0,72,744	0/0:14,0:14:20.36:0,20,102	0/0:13,0:13:36.08:0,36,389
chr10	50613932	.	A	AG	2072.24	PASS	AB=0.993;AC=22;AF=0.393;AN=56;BaseQRankSum=8.848;DP=606;FS=11.353;HRun=5;HaplotypeScore=97.6058;InbreedingCoeff=0.5524;MQ=77.79;MQ0=12;MQRankSum=-0.967;QD=9.09;ReadPosRankSum=4.396;VQSLOD=0.3672;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,2:19:31.11:154,31,0	0/0:7,0:7:14.63:0,15,85	0/0:77,0:31:79.85:0,80,644	0/0:77,0:34:58.27:0,58,482	0/0:30,0:30:87.07:0,87,874	0/1:17,0:17:50.57:51,0,58	1/1:15,0:15:15.94:70,16,0	0/1:23,0:24:36.94:37,0,140	0/1:13,0:13:8.95:36,0,9	0/0:15,0:15:42:0,42,420	0/0:24,0:24:66.03:0,66,650	1/1:0,20:20:33.10:414,33,0	1/1:2,8:10:12.04:151,12,0	0/0:11,0:11:30.01:0,30,291	0/0:27,0:27:61.42:0,61,358	1/1:0,0:16:36.89:183,37,0	0/0:22,0:22:54:0,54,539	0/0:13,0:13:39.03:0,39,386	0/1:19,0:19:0.99:1,0,90	0/1:20,0:20:62.94:63,0,86	0/0:7,0:7:1.58:0,2,43	1/1:2,12:16:38.94:417,39,0	1/1:1,12:14:21.77:371,22,0	1/1:1,9:10:24.08:302,24,0	0/0:25,0:25:69.13:0,69,710	0/0:26,0:26:72.12:0,72,742	0/1:15,0:15:24.02:24,0,72	0/0:17,0:17:45.04:0,45,444
chr10	50614037	.	TTGTGTGTG	T	237.78	PASS	AC=10;AF=0.208;AN=48;BaseQRankSum=2.598;DP=567;FS=4.042;HRun=0;HaplotypeScore=139.8357;InbreedingCoeff=0.5635;MQ=67.73;MQ0=16;MQRankSum=-2.758;QD=3.17;ReadPosRankSum=0.376;VQSLOD=2.3711;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:4.81:0,5,30	0/0:12,0:12:18.05:0,18,503	./.	./.	0/0:24,0:24:18.06:0,18,443	1/1:9,2:11:3.01:74,3,0	0/0:23,0:23:0:0,0,0	0/0:27,0:24:0:0,0,0	1/1:11,3:14:3.01:74,3,0	0/0:22,0:22:9.03:0,9,155	0/0:22,0:20:15.05:0,15,350	0/0:22,0:21:2.69:0,3,104	0/0:16,0:16:3.46:0,3,25	0/0:24,0:24:15.05:0,15,301	0/0:22,0:22:12.04:0,12,401	1/1:12,3:16:6.02:130,6,0	0/0:34,0:33:29.41:0,29,521	0/0:20,0:20:21.96:0,22,497	./.	1/1:18,0:18:2.04:6,2,0	./.	0/0:13,0:13:11.98:0,12,113	0/0:19,0:18:9.50:0,10,133	0/0:15,0:15:12.01:0,12,133	0/0:15,0:16:12.03:0,12,201	0/0:31,0:31:8.51:0,9,210	1/1:14,2:13:3.01:74,3,0	0/0:6,0:6:9:0,9,196
chr10	50614690	.	GTAAGCAATATATGAAGTCGCACAAGTATACACACACATA	G	4580.44	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.239;DP=724;FS=6.741;HRun=0;HaplotypeScore=669.3548;InbreedingCoeff=0.9875;MQ=82.73;MQ0=0;MQRankSum=-6.123;QD=120.54;ReadPosRankSum=2.653;VQSLOD=0.6744;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,132,16360	1/1:2,5:7:15.05:1255,15,0	0/0:24,0:24:60.18:0,60,3273	0/0:18,0:18:54.01:0,54,3184	0/0:27,0:27:81.28:0,81,10809	0/0:32,0:32:96.32:0,96,13340	0/0:16,0:16:45.12:0,45,4520	0/0:29,0:29:84.28:0,84,6403	0/0:29,0:29:84.28:0,84,11573	0/0:34,0:34:99:0,99,13808	0/0:19,0:19:57.20:0,57,8316	0/0:20,0:20:60.21:0,60,9310	0/0:29,0:29:87.30:0,87,12995	0/0:37,0:37:99:0,108,14612	1/1:20,11:31:39.13:3325,39,0	0/0:37,0:37:99:0,108,15296	0/0:18,0:18:54.15:0,54,6605	0/0:18,0:18:54.17:0,54,6405	0/0:11,0:11:33.11:0,33,3112	0/0:39,0:39:99:0,111,14546	0/0:37,0:37:99:0,108,13895	0/0:31,0:31:93.32:0,93,13808	0/0:22,0:22:66.23:0,66,9434	0/0:20,0:20:60.19:0,60,7784	0/0:26,0:26:78.22:0,78,10470	0/0:36,0:36:99:0,102,13275	0/0:26,0:26:78.27:0,78,11665	0/0:6,0:6:18.06:0,18,3214
chr10	50614769	.	CAT	C	1825.37	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=10.727;DP=704;FS=9.159;HRun=0;HaplotypeScore=107.1664;InbreedingCoeff=0.9994;MQ=70.83;MQ0=0;MQRankSum=-6.146;QD=38.84;ReadPosRankSum=0.893;VQSLOD=5.5248;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:78.25:0,78,1460	1/1:0,10:10:27.09:402,27,0	0/0:14,0:14:38.15:0,38,652	0/0:18,0:16:36.05:0,36,640	0/0:26,0:26:78.25:0,78,1472	0/0:28,0:28:78.25:0,78,1466	0/0:26,0:26:78.25:0,78,1465	0/0:45,0:45:99:0,132,2473	0/0:28,0:28:84.27:0,84,1554	0/0:23,0:23:66.22:0,66,1229	0/0:16,0:16:48.16:0,48,927	0/0:30,0:30:87.27:0,87,1592	0/0:26,0:26:78.27:0,78,1462	0/0:29,0:29:87.28:0,87,1646	1/1:1,36:37:99:1545,105,0	0/0:28,0:28:81.26:0,81,1531	0/0:20,0:20:60.21:0,60,1147	0/0:21,0:21:57.15:0,57,1020	0/0:19,0:19:55.06:0,55,1005	0/0:33,0:33:99:0,99,1878	0/0:20,0:20:60.19:0,60,1114	0/0:20,0:20:57.18:0,57,1066	0/0:23,0:23:69.21:0,69,1273	0/0:16,0:16:48.16:0,48,918	0/0:34,0:34:99:0,102,1925	0/0:37,0:37:99:0,102,1971	0/0:29,0:29:87.28:0,87,1645	0/0:18,0:18:54.19:0,54,1043
chr10	50614989	.	A	AGCAG	1633.64	PASS	AB=0.839;AC=16;AF=0.286;AN=56;BaseQRankSum=-0.664;DP=598;FS=7.147;HRun=0;HaplotypeScore=98.9535;InbreedingCoeff=0.6975;MQ=68.11;MQ0=3;MQRankSum=-1.351;QD=7.39;ReadPosRankSum=-4.895;VQSLOD=-0.6281;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:14.55:0,15,211	0/0:8,0:8:6.42:0,6,132	0/0:23,0:18:3:0,3,26	0/1:28,0:23:4.12:4,0,109	0/0:13,0:13:18.03:0,18,237	1/1:5,7:12:0.47:1,0,0	1/1:18,17:32:9.03:192,9,0	1/1:10,0:10:6.02:111,6,0	1/1:16,15:31:12.04:287,12,0	0/0:14,0:14:20.94:0,21,244	0/0:14,0:14:21.07:0,21,306	0/0:22,0:22:27.06:0,27,382	0/0:23,0:22:24.07:0,24,350	0/0:29,0:29:54.15:0,54,778	0/0:23,0:23:8.80:0,9,269	0/0:22,0:22:50.74:0,51,720	0/0:28,0:28:51.17:0,51,786	0/0:21,0:21:16.59:0,17,524	1/1:9,5:16:20.27:274,20,0	1/1:5,9:15:20.82:259,21,0	0/1:22,19:41:19.03:252,0,19	0/0:19,0:19:19.33:0,19,299	0/0:8,0:8:9.03:0,9,132	0/0:41,0:41:66.20:0,66,1007	0/0:20,0:20:27.08:0,27,369	0/0:20,0:20:21.05:0,21,274	1/1:15,14:30:17.67:429,18,0	0/0:4,0:4:12.04:0,12,181
chr10	50618355	.	ATG	A	9447.70	PASS	AB=0.880;AC=35;AF=0.625;AN=56;BaseQRankSum=10.989;DP=615;FS=16.906;HRun=0;HaplotypeScore=80.0249;InbreedingCoeff=0.9069;MQ=68.53;MQ0=3;MQRankSum=-1.448;QD=24.54;ReadPosRankSum=2.302;VQSLOD=4.4596;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:15,38:53:99:1227,99,0	1/1:0,0:4:8.52:42,9,0	0/0:29,1:23:10.95:0,11,674	0/0:22,0:18:22.62:0,23,463	0/0:22,0:22:48.14:0,48,749	1/1:2,17:19:42.13:521,42,0	1/1:6,24:30:60.19:744,60,0	1/1:10,14:24:42.07:480,42,0	1/1:0,12:12:33.10:409,33,0	0/0:25,0:25:60.11:0,60,871	0/0:21,0:21:57.19:0,57,935	1/1:4,16:20:48.15:595,48,0	1/1:2,10:13:30.04:354,30,0	0/0:23,0:23:54.18:0,54,883	1/1:3,0:19:31.25:154,31,0	1/1:2,17:19:51.16:632,51,0	0/1:19,3:22:63.47:63,0,542	0/0:23,0:23:66.23:0,66,1082	1/1:5,11:16:30.07:358,30,0	1/1:4,15:19:45.14:558,45,0	1/1:2,21:23:54.17:670,54,0	1/1:6,17:22:54.17:670,54,0	1/1:5,5:10:18.06:223,18,0	1/1:2,28:30:78.24:967,78,0	0/0:23,0:23:42.13:0,42,660	0/0:28,0:28:60.18:0,60,898	1/1:4,25:28:63.20:781,63,0	0/0:12,0:12:30.10:0,30,492
chr10	50620976	.	A	AG	3104.85	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-0.656;DP=629;FS=0.435;HRun=0;HaplotypeScore=117.0145;InbreedingCoeff=0.9912;MQ=79.33;MQ0=0;MQRankSum=-2.818;QD=32.68;ReadPosRankSum=2.034;VQSLOD=3.2642;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:54.84:0,55,175	0/0:9,0:9:12.68:0,13,36	0/0:28,0:28:78.23:0,78,1036	0/0:21,0:20:55.05:0,55,743	0/0:28,0:28:84.28:0,84,1174	0/0:23,0:23:48.83:0,49,177	0/0:29,0:29:50.52:0,51,185	0/0:31,0:30:79.88:0,80,378	0/0:26,0:26:49.49:0,49,163	0/0:24,0:24:69.23:0,69,965	0/0:16,0:16:48.14:0,48,653	1/1:0,29:29:78:1089,78,0	1/1:1,20:21:60.16:805,60,0	0/0:20,0:20:57.17:0,57,776	0/0:25,0:25:56.35:0,56,215	0/0:30,0:30:67.65:0,68,245	0/0:30,0:30:90.27:0,90,1223	0/0:21,0:21:63.21:0,63,881	0/0:19,0:19:46.90:0,47,205	0/0:24,0:24:53.70:0,54,246	0/0:23,0:23:42.26:0,42,132	1/1:3,11:14:27.05:380,27,0	1/1:0,12:12:30.10:414,30,0	1/1:0,19:19:42.61:592,43,0	0/0:20,0:20:60.18:0,60,806	0/0:23,0:23:69.23:0,69,952	0/0:18,0:18:25.75:0,26,89	0/0:6,0:6:18.06:0,18,252
chr10	50620978	.	T	TA	16018.68	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=2.633;DP=636;FS=1.753;HRun=1;HaplotypeScore=74.8848;InbreedingCoeff=0.9985;MQ=79.58;MQ0=0;MQRankSum=-2.687;QD=39.95;ReadPosRankSum=1.759;VQSLOD=5.5959;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,42:42:99:1573,105,0	1/1:0,8:8:24.08:360,24,0	0/0:27,0:27:72.22:0,72,905	0/0:20,0:19:48.63:0,49,622	0/0:28,0:28:81.26:0,81,1052	1/1:1,22:23:63.21:944,63,0	1/1:1,31:32:84.28:1252,84,0	1/1:1,30:30:87.28:1282,87,0	1/1:0,26:26:69.23:1034,69,0	0/0:24,0:24:72.22:0,72,910	0/0:16,0:16:48.16:0,48,619	1/1:27,0:27:78.26:1134,78,0	1/1:20,1:21:60.20:876,60,0	0/0:20,0:20:54.16:0,54,686	1/1:0,26:26:72.24:1079,72,0	1/1:0,31:31:90.30:1349,90,0	0/0:29,0:29:87.26:0,87,1113	0/0:21,0:21:63.20:0,63,818	1/1:1,19:20:57.18:829,57,0	1/1:4,23:27:69.17:1001,69,0	1/1:0,24:24:66.22:989,66,0	1/1:15,0:15:36.09:467,36,0	1/1:12,0:12:30.10:436,30,0	1/1:17,0:17:42.14:611,42,0	0/0:21,0:21:60.18:0,60,765	0/0:23,0:23:66.21:0,66,845	1/1:1,18:19:54.18:803,54,0	0/0:6,0:6:18.06:0,18,234
chr10	50621330	.	GGCTAA	G	3009.46	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=10.911;DP=647;FS=43.363;HRun=0;HaplotypeScore=127.1278;InbreedingCoeff=0.9871;MQ=95.38;MQ0=0;MQRankSum=-10.359;QD=49.34;ReadPosRankSum=-0.554;VQSLOD=1.7361;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,102,3258	0/0:12,0:12:36.12:0,36,1182	0/0:33,0:33:96.33:0,96,3072	0/0:33,0:31:72.99:0,73,2387	0/0:18,0:18:54.19:0,54,1684	0/0:27,0:26:81.28:0,81,2696	0/0:28,0:28:84.29:0,84,2715	0/0:41,0:41:99:0,123,3936	0/0:23,0:23:69.22:0,69,2192	0/0:19,0:19:57.20:0,57,1893	0/0:17,0:17:51.18:0,51,1639	1/1:0,14:14:36.08:785,36,0	1/1:0,18:18:45.15:1044,45,0	0/0:30,0:30:90.31:0,90,2977	0/0:32,0:32:96.33:0,96,3146	0/0:33,0:33:99:0,99,3205	0/0:26,0:26:75.26:0,75,2485	0/0:29,0:29:87.30:0,87,2814	0/0:19,0:19:57.20:0,57,1852	0/0:15,0:15:45.15:0,45,1498	0/0:40,0:40:99:0,120,3823	1/1:0,6:6:18.06:418,18,0	1/1:0,5:5:12:229,12,0	1/1:0,18:18:36.04:705,36,0	0/0:31,0:31:93.32:0,93,3052	0/0:24,0:24:72.25:0,72,2383	0/0:17,0:17:51.18:0,51,1699	0/0:5,0:5:15.05:0,15,485
chr10	50621646	.	G	GCA	3754.71	PASS	AB=0.703;AC=14;AF=0.304;AN=46;BaseQRankSum=-10.626;DP=571;FS=0.911;HRun=0;HaplotypeScore=76.2722;InbreedingCoeff=0.5194;MQ=61.65;MQ0=17;MQRankSum=0.811;QD=15.14;ReadPosRankSum=-0.745;VQSLOD=3.4135;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:26:11.36:0,11,213	0/0:14,0:14:8.38:0,8,135	0/0:25,0:12:9:0,9,85	0/0:24,0:11:8.50:0,9,123	0/0:28,0:30:68.96:0,69,738	1/1:8,22:31:5.96:590,6,0	0/1:7,11:18:21.14:178,0,21	1/1:20,25:45:15.18:653,15,0	1/1:6,11:17:19.31:292,19,0	0/0:25,0:25:54.04:0,54,596	0/0:24,0:24:57.11:0,57,649	./.	./.	0/0:19,0:19:42.12:0,42,495	0/1:42,0:41:33.77:34,0,266	0/0:30,0:28:62.40:0,62,451	0/0:16,0:17:38.88:0,39,396	0/0:29,0:29:72.14:0,72,815	0/1:3,6:9:5.44:242,0,5	0/1:10,22:29:84.76:672,0,85	1/1:5,10:14:21.07:323,21,0	./.	./.	./.	0/0:21,1:22:2.92:0,3,496	0/0:22,0:22:53.92:0,54,599	1/1:8,31:39:48.16:771,48,0	0/0:7,0:5:14.99:0,15,152
chr10	50621663	.	CAT	C	810.50	PASS	AB=0.988;AC=6;AF=0.130;AN=46;BaseQRankSum=1.963;DP=592;FS=10.509;HRun=0;HaplotypeScore=98.5307;InbreedingCoeff=0.6634;MQ=61.79;MQ0=15;MQRankSum=0.313;QD=6.19;ReadPosRankSum=0.445;VQSLOD=2.2770;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,22:34:23.36:277,23,0	0/0:14,0:14:11.14:0,11,257	0/1:20,0:8:0.71:1,0,123	0/0:27,0:15:19.93:0,20,204	0/0:33,0:33:75.17:0,75,1128	0/0:33,0:33:60.08:0,60,643	0/0:19,0:19:27.03:0,27,291	0/0:41,0:41:75.05:0,75,790	0/0:14,0:14:27.07:0,27,335	0/0:24,1:25:24.89:0,25,838	0/0:22,1:23:25.07:0,25,860	./.	./.	0/0:19,0:19:51.12:0,51,748	0/1:39,1:39:62.92:63,0,572	1/1:5,28:32:47.90:594,48,0	0/0:19,0:19:30.09:0,30,523	0/0:28,1:29:34.04:0,34,1031	0/0:11,0:11:26.98:0,27,270	0/0:37,0:34:84.15:0,84,975	0/0:20,0:19:44.98:0,45,447	./.	./.	./.	0/0:24,0:24:63.12:0,63,862	0/0:25,0:25:60.15:0,60,882	0/0:37,0:37:62.38:0,62,646	0/0:9,0:7:15.01:0,15,196
chr10	50626769	.	C	CA	1766.32	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-8.535;DP=795;FS=5.457;HRun=4;HaplotypeScore=84.0918;InbreedingCoeff=0.9994;MQ=75.70;MQ0=0;MQRankSum=-1.391;QD=33.97;ReadPosRankSum=0.732;VQSLOD=4.1286;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:72.20:0,72,816	1/1:2,9:11:27.09:369,27,0	0/0:17,0:16:41.78:0,42,445	0/0:21,0:21:50:0,50,501	0/0:28,0:28:81.23:0,81,919	0/0:32,0:32:87.25:0,87,987	0/0:21,0:21:57.13:0,57,626	0/0:33,0:33:96.27:0,96,1088	0/0:27,0:27:75.20:0,75,841	0/0:34,0:34:99:0,99,1123	0/0:21,0:21:60.17:0,60,681	0/0:25,0:25:69.18:0,69,773	0/0:31,0:31:90.26:0,90,1021	0/0:32,0:32:87.22:0,87,968	1/1:3,38:41:99:1519,111,0	0/0:45,0:45:99:0,132,1483	0/0:24,0:24:72.21:0,72,817	0/0:17,0:17:48.14:0,48,544	0/0:27,0:27:78.19:0,78,862	0/0:51,0:51:99:0,147,1667	0/0:25,0:25:66.19:0,66,749	0/0:34,0:34:93.26:0,93,1055	0/0:22,0:22:54.14:0,54,602	0/0:23,0:23:57.16:0,57,647	0/0:32,0:32:96.26:0,96,1080	0/0:40,0:40:99:0,114,1279	0/0:44,0:44:99:0,132,1477	0/0:12,0:12:36.07:0,36,386
chr10	50628462	.	AACACACACAC	A	321.89	PASS	AB=0.938;AC=14;AF=0.304;AN=46;BaseQRankSum=3.469;DP=491;FS=15.233;HRun=0;HaplotypeScore=142.8124;InbreedingCoeff=0.3498;MQ=64.12;MQ0=13;MQRankSum=-2.216;QD=2.24;ReadPosRankSum=-0.303;VQSLOD=2.0643;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:25:39.13:0,39,1417	1/1:7,2:9:3.01:88,3,0	./.	./.	0/0:17,0:17:27.09:0,27,863	1/1:6,0:6:2.84:8,3,0	0/1:19,0:19:0:0,0,0	0/0:26,0:23:1.55:0,2,4	1/1:12,0:13:2.90:16,3,0	0/0:19,0:19:24.08:0,24,936	0/0:11,0:11:3.01:0,3,117	./.	0/1:13,0:13:17.79:41,0,18	0/0:20,0:20:18.06:0,18,483	1/1:12,1:14:2.96:20,3,0	0/0:13,0:13:15.05:0,15,343	0/0:27,0:28:33.10:0,33,1202	0/0:8,0:10:16.61:0,17,536	./.	1/1:17,0:18:6.02:118,6,0	./.	0/1:25,6:30:15.31:98,0,15	0/0:21,0:22:0:0,0,0	0/0:18,1:19:2.74:0,3,18	0/0:22,0:21:18.06:0,18,762	0/0:14,0:14:14.41:0,14,409	0/1:19,0:21:63.70:64,0,81	0/0:1,0:1:3.01:0,3,71
chr10	50629614	.	C	CAAAAAA	3550.32	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=6.053;DP=580;FS=10.008;HRun=9;HaplotypeScore=143.3732;InbreedingCoeff=0.9616;MQ=68.14;MQ0=1;MQRankSum=-6.059;QD=31.14;ReadPosRankSum=-4.653;VQSLOD=-0.6781;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,123,1194	0/0:12,0:12:36.11:0,36,636	0/0:13,0:13:26.94:0,27,464	0/0:9,0:6:12.03:0,12,219	0/0:21,0:21:44.95:0,45,810	0/0:17,0:17:42.03:0,42,754	0/0:18,0:18:6.78:0,7,762	0/0:26,0:26:44.84:0,45,806	0/0:18,0:18:51.13:0,51,913	0/0:17,0:17:45.09:0,45,783	0/0:10,0:11:27.05:0,27,464	1/1:8,1:19:24.08:473,24,0	1/1:13,0:22:30.10:570,30,0	0/0:27,0:27:75.23:0,75,1391	0/0:28,0:29:81.04:0,81,1367	0/0:3,0:13:10.76:0,11,126	0/0:29,0:30:90.15:0,90,1584	0/0:18,0:18:48.09:0,48,855	0/0:12,0:12:30.02:0,30,541	0/0:17,0:17:29.89:0,30,524	0/0:28,0:28:63.03:0,63,1163	1/1:10,1:26:56.43:1018,56,0	1/1:7,0:23:33.34:549,33,0	1/1:11,9:23:36.06:941,36,0	0/0:26,0:26:44.74:0,45,804	0/0:32,0:32:81.01:0,81,1431	0/0:18,0:18:48.10:0,48,858	0/0:10,0:10:30.10:0,30,543
chr10	50629615	.	A	AC	1688.91	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=-5.067;DP=583;FS=1.085;HRun=1;HaplotypeScore=91.3005;InbreedingCoeff=0.7802;MQ=68.17;MQ0=1;MQRankSum=0.595;QD=28.63;ReadPosRankSum=2.371;VQSLOD=3.5713;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,46:47:99:1756,123,0	0/0:12,0:12:36.12:0,36,494	0/0:13,0:13:29.22:0,29,402	0/0:9,0:6:12.04:0,12,168	0/0:21,0:21:59.93:0,60,725	0/0:17,0:17:51.12:0,51,641	0/0:18,0:18:53.74:0,54,689	0/0:28,0:28:69.12:0,69,833	0/0:18,0:18:54.17:0,54,722	0/0:18,0:18:51.16:0,51,676	0/0:10,0:10:29.88:0,30,366	0/0:19,0:19:31.33:0,31,196	0/0:22,0:22:27.12:0,27,182	0/0:27,0:27:81.25:0,81,1096	0/0:29,0:29:80.88:0,81,1118	0/1:12,0:12:2.51:39,0,3	0/0:30,0:30:82.31:0,82,1203	0/0:18,0:18:54.11:0,54,702	0/0:12,0:12:33.08:0,33,432	0/0:16,0:16:48.07:0,48,562	0/0:28,0:28:75.20:0,75,971	0/0:27,0:27:39.52:0,40,285	0/0:22,0:22:33.72:0,34,173	0/0:25,0:24:35.52:0,36,183	0/0:26,0:26:68.95:0,69,818	0/0:31,0:31:87.20:0,87,1151	0/0:18,0:18:54.16:0,54,721	0/0:10,0:10:30.10:0,30,409
chr10	50631816	.	G	GACAC	4450.19	PASS	AB=1.000;AC=30;AF=0.536;AN=56;BaseQRankSum=12.330;DP=643;FS=4.492;HRun=0;HaplotypeScore=137.0106;InbreedingCoeff=0.6714;MQ=59.26;MQ0=8;MQRankSum=-3.344;QD=12.40;ReadPosRankSum=5.267;VQSLOD=4.0128;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:37,0:36:29.97:400,30,0	1/1:8,0:8:11.89:96,12,0	0/0:33,0:25:56.60:0,57,709	0/0:28,0:20:28.72:0,29,486	0/0:44,0:44:99:0,120,2040	1/1:16,0:16:2.47:297,2,0	0/1:27,0:27:36.33:75,0,36	0/1:33,0:32:23.54:24,0,260	1/1:17,0:17:18.06:241,18,0	0/0:26,0:25:69.09:0,69,1132	0/0:18,0:18:48.10:0,48,720	1/1:1,11:13:15.04:319,15,0	1/1:2,15:19:20.53:462,21,0	0/0:18,0:17:51.13:0,51,897	1/1:28,0:28:20.97:179,21,0	1/1:14,0:14:16.38:85,16,0	0/0:38,0:37:99:0,102,1605	0/0:26,0:25:41.08:0,41,840	0/1:17,0:16:99:103,0,104	1/1:15,0:15:18.15:176,18,0	0/1:17,0:17:15.45:56,0,15	1/1:2,10:14:15.02:228,15,0	1/1:1,14:17:24.06:447,24,0	1/1:9,24:36:40.52:858,41,0	0/0:19,0:19:57.12:0,57,887	0/0:29,0:29:66.14:0,66,1256	1/1:30,0:30:30.10:405,30,0	0/0:4,0:4:11.99:0,12,130
chr10	50631820	.	G	GACAGACAC	7899.66	PASS	AB=1.000;AC=30;AF=0.536;AN=56;BaseQRankSum=-0.920;DP=658;FS=6.102;HRun=0;HaplotypeScore=167.7238;InbreedingCoeff=0.7321;MQ=58.64;MQ0=8;MQRankSum=-4.190;QD=21.07;ReadPosRankSum=1.339;VQSLOD=3.5709;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,0:35:35.82:740,36,0	1/1:10,0:10:17.88:164,18,0	0/0:31,0:23:47.46:0,47,427	0/0:29,0:22:36.36:0,36,329	0/0:46,0:47:99:0,117,2583	1/1:3,15:19:26.58:1062,27,0	1/1:4,21:28:6.02:264,6,0	1/1:33,0:33:70.07:909,70,0	1/1:0,17:21:18.06:789,18,0	0/0:25,0:26:75.11:0,75,1429	0/0:19,0:19:51.04:0,51,806	1/1:14,0:14:14.16:116,14,0	0/1:20,0:19:5.40:121,0,5	0/0:17,0:17:51.13:0,51,1156	1/1:27,0:27:29.23:292,29,0	1/1:14,0:14:17.37:60,17,0	0/0:35,0:35:93.44:0,93,1744	0/0:18,0:22:39.05:0,39,950	1/1:6,9:20:19.19:843,19,0	1/1:0,15:18:12.04:426,12,0	1/1:18,0:18:29.66:405,30,0	0/1:12,0:12:17.31:35,0,17	0/1:18,0:18:0.76:101,0,1	0/1:34,0:34:93.47:218,0,93	0/0:19,0:19:57.10:0,57,1186	0/0:27,0:29:84.18:0,84,1638	1/1:0,29:31:33.55:1357,34,0	0/0:3,0:4:11.98:0,12,155
chr10	50631833	.	A	ACACC	3598.20	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=11.748;DP=622;FS=1.413;HRun=0;HaplotypeScore=126.9114;InbreedingCoeff=-0.2440;MQ=56.43;MQ0=6;MQRankSum=-4.645;QD=10.81;ReadPosRankSum=4.626;VQSLOD=3.1669;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:35,0:34:45.65:275,0,46	0/1:10,0:10:10.39:10,0,20	0/0:22,0:13:25.66:0,26,378	0/0:25,0:16:35.82:0,36,403	0/0:45,0:45:99:0,126,2068	0/1:18,0:18:82.70:285,0,83	0/1:20,0:20:58.94:72,0,59	0/1:33,0:32:12.15:12,0,217	0/1:21,0:21:46.81:218,0,47	0/0:26,0:25:69.23:0,69,1226	0/0:19,0:19:54.10:0,54,819	0/1:15,0:15:9.64:187,0,10	0/1:21,0:20:23.30:272,0,23	0/0:19,0:18:51.15:0,51,862	0/0:27,0:27:6.48:0,6,52	1/1:0,16:17:24.08:647,24,0	0/0:30,0:29:78.22:0,78,1321	0/0:19,0:18:42.61:0,43,696	0/1:18,0:18:99:150,0,120	0/1:18,0:18:41.68:188,0,42	0/1:17,0:17:30.48:61,0,30	0/1:12,0:12:9.47:119,0,9	0/1:22,0:22:83.32:244,0,83	0/1:30,0:30:47.47:500,0,47	0/0:21,0:21:63.16:0,63,1056	0/0:31,0:31:90.27:0,90,1460	0/1:26,0:26:35.33:359,0,35	0/0:5,0:5:15.03:0,15,207
chr10	50632247	.	G	GT	565.19	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-6.860;DP=719;FS=9.701;HRun=7;HaplotypeScore=68.8550;InbreedingCoeff=0.9695;MQ=85.29;MQ0=0;MQRankSum=-3.174;QD=22.61;ReadPosRankSum=0.532;VQSLOD=3.0361;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,117,1122	0/0:13,0:13:36.03:0,36,339	0/0:20,0:20:54.03:0,54,499	0/0:25,0:25:43.67:0,44,425	0/0:24,0:24:66.10:0,66,637	0/0:19,0:19:57.09:0,57,550	0/0:25,0:25:69.05:0,69,642	0/0:30,0:30:66.10:0,66,637	0/0:25,0:25:72.10:0,72,689	0/0:28,0:28:81.12:0,81,778	0/0:14,0:14:42.05:0,42,398	0/0:27,0:27:81.12:0,81,776	0/0:27,0:27:72.08:0,72,683	0/0:24,0:24:69.09:0,69,661	0/0:26,0:26:72.11:0,72,695	1/1:3,22:25:31.21:660,31,0	0/0:33,0:33:90.09:0,90,854	0/0:34,0:34:90.14:0,90,869	0/0:22,0:22:63.08:0,63,601	0/0:16,0:16:36.05:0,36,348	0/0:39,0:39:99:0,105,1002	0/0:23,0:23:60.09:0,60,579	0/0:15,0:15:45.06:0,45,428	0/0:38,0:38:99:0,111,1071	0/0:21,0:21:60.10:0,60,579	0/0:38,0:38:96.08:0,96,909	0/0:38,0:38:99:0,105,1001	0/0:4,0:4:12.02:0,12,116
chr10	50633037	.	AT	A	976.41	PASS	AB=0.810;AC=17;AF=0.304;AN=56;BaseQRankSum=8.535;DP=547;FS=0.935;HRun=14;HaplotypeScore=74.6889;InbreedingCoeff=0.4526;MQ=75.87;MQ0=1;MQRankSum=-0.822;QD=4.72;ReadPosRankSum=3.949;VQSLOD=1.8307;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,0:26:34.59:100,35,0	0/0:6,0:12:17.37:0,17,113	0/0:21,0:20:22.81:0,23,158	0/0:17,0:13:16.68:0,17,125	0/0:15,0:16:35.99:0,36,317	0/0:19,1:23:24.08:0,24,333	0/1:17,1:23:7.56:8,0,223	0/0:31,2:33:9.72:0,10,360	0/1:13,2:16:8.31:8,0,197	0/0:20,0:21:44.87:0,45,397	0/0:22,0:22:48:0,48,434	1/1:4,11:16:28.76:191,29,0	1/1:3,11:14:29.71:204,30,0	0/0:14,2:16:12.49:0,12,246	0/0:2,0:18:17.15:0,17,89	1/1:4,11:15:32.67:225,33,0	0/0:35,2:38:37.16:0,37,740	0/0:15,1:16:15.38:0,15,275	0/1:19,2:25:5.98:6,0,246	0/0:22,0:23:44.01:0,44,412	0/0:17,0:19:32.68:0,33,272	0/1:7,6:13:10.03:85,0,10	0/1:8,15:24:8.87:209,0,9	1/1:2,6:8:14.86:103,15,0	0/0:20,0:21:44.69:0,45,379	0/1:16,2:18:8.14:8,0,214	0/0:19,0:23:56.86:0,57,467	0/1:5,2:9:14.89:15,0,118
chr10	50634136	.	A	ATAACTACCTAC	3076.21	PASS	AB=0.815;AC=12;AF=0.214;AN=56;BaseQRankSum=1.696;DP=772;FS=2.660;HRun=0;HaplotypeScore=214.8949;InbreedingCoeff=0.3476;MQ=66.28;MQ0=5;MQRankSum=-3.609;QD=12.56;ReadPosRankSum=-0.235;VQSLOD=2.7994;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:35,0:35:16.53:17,0,971	0/1:6,0:7:42.35:131,0,42	0/0:28,0:23:69.21:0,69,2104	0/0:16,0:13:36.97:0,37,857	0/0:24,0:24:72.21:0,72,2172	0/0:5,0:40:28.30:0,28,206	0/1:21,0:21:74.66:75,0,393	0/0:37,0:36:11.45:0,11,1067	0/0:4,0:22:16.21:0,16,158	0/0:32,0:32:96.32:0,96,3156	0/0:22,0:22:66.20:0,66,2130	0/1:0,1:37:7.97:530,0,8	0/1:2,0:32:16.13:391,0,16	0/0:24,0:24:72.24:0,72,2310	0/1:31,0:31:30.05:30,0,742	0/0:3,0:26:20.89:0,21,156	0/0:27,0:27:81.28:0,81,2657	0/0:17,0:17:48.16:0,48,1349	0/0:4,0:31:4.31:0,4,668	0/0:0,0:34:81.56:0,82,798	0/0:1,0:31:23.38:0,23,109	1/1:0,0:21:10.04:467,10,0	1/1:0,0:26:21.07:954,21,0	1/1:1,2:35:19.61:648,20,0	0/0:34,0:34:99:0,102,3198	0/0:37,0:37:99:0,105,2981	0/0:2,0:25:29.69:0,30,166	0/0:17,0:16:48.13:0,48,1297
chr10	50634351	.	CCCCAGAATGCCAG	C	16984.90	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=17.628;DP=735;FS=0.335;HRun=0;HaplotypeScore=276.6954;InbreedingCoeff=0.9982;MQ=77.62;MQ0=0;MQRankSum=-17.000;QD=90.35;ReadPosRankSum=-1.094;VQSLOD=3.9698;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,114,7408	0/0:10,0:10:30.10:0,30,1942	0/0:20,0:20:60.21:0,60,3508	0/0:18,0:18:48.15:0,48,2108	0/0:38,0:38:99:0,114,7259	1/1:5,26:31:72.25:2834,72,0	1/1:5,36:41:78.27:3107,78,0	1/1:6,19:25:57.17:2179,57,0	1/1:1,17:18:45.63:1773,46,0	0/0:37,0:37:99:0,108,7049	0/0:28,0:28:84.28:0,84,5094	0/0:26,0:26:75.26:0,75,4753	0/0:32,0:32:96.33:0,96,6043	0/0:33,0:33:99:0,99,6427	0/0:25,0:25:75.26:0,75,4644	0/0:24,0:24:66.70:0,67,4304	0/0:27,0:27:78.72:0,79,4763	0/0:28,0:28:84.29:0,84,5280	1/1:1,16:17:48.14:1546,48,0	1/1:1,19:20:54.18:2020,54,0	1/1:1,10:11:24.08:950,24,0	0/0:25,0:25:75.25:0,75,4752	0/0:30,0:30:87.30:0,87,5761	0/0:31,0:31:87.30:0,87,5575	0/0:27,0:27:81.28:0,81,5400	0/0:43,0:43:99:0,126,7946	1/1:1,24:25:63.22:2576,63,0	0/0:6,0:6:18.06:0,18,1205
chr10	50634432	.	G	GT	639.39	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-5.251;DP=657;FS=21.815;HRun=4;HaplotypeScore=81.0463;InbreedingCoeff=0.9838;MQ=92.97;MQ0=0;MQRankSum=-1.757;QD=29.06;ReadPosRankSum=3.221;VQSLOD=1.9901;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:78.21:0,78,874	0/0:5,0:5:15.04:0,15,170	0/0:31,0:31:87.24:0,87,975	0/0:31,0:31:77.25:0,77,804	0/0:22,0:22:66.16:0,66,735	0/0:22,0:22:54.15:0,54,609	0/0:45,0:45:99:0,108,1208	0/0:23,0:23:66.18:0,66,741	0/0:26,0:26:69.19:0,69,777	0/0:23,0:23:63.16:0,63,701	0/0:12,0:12:33.01:0,33,356	0/0:24,0:24:72.19:0,72,805	0/0:32,0:32:87.22:0,87,968	0/0:27,0:27:78.19:0,78,861	0/0:42,0:42:99:0,117,1297	1/1:2,19:22:54.18:734,54,0	0/0:26,0:26:75.19:0,75,837	0/0:18,0:18:44.74:0,45,462	0/0:12,0:12:36.10:0,36,400	0/0:16,0:16:39.08:0,39,424	0/0:16,0:16:42.11:0,42,471	0/0:13,0:13:36.10:0,36,407	0/0:21,0:21:60.17:0,60,674	0/0:25,0:25:69.20:0,69,782	0/0:32,0:32:93.27:0,93,1052	0/0:21,0:21:60.17:0,60,680	0/0:29,0:29:72.04:0,72,781	0/0:14,0:14:42.12:0,42,476
chr10	50635224	.	T	TA	7248.79	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-16.692;DP=737;FS=1.750;HRun=6;HaplotypeScore=66.6602;InbreedingCoeff=0.9709;MQ=88.92;MQ0=1;MQRankSum=-1.610;QD=32.65;ReadPosRankSum=-0.545;VQSLOD=4.7899;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,129,1308	0/0:8,0:8:24.05:0,24,245	0/0:27,0:27:66.10:0,66,654	0/0:28,0:27:63.03:0,63,681	0/0:30,0:30:72.16:0,72,732	1/1:2,21:23:60.19:755,60,0	1/1:0,19:19:48.15:604,48,0	1/1:8,27:35:81.24:1004,81,0	1/1:5,25:30:66.21:830,66,0	0/0:24,0:24:60.12:0,60,606	0/0:20,0:20:57.13:0,57,581	0/0:26,0:26:72.16:0,72,735	0/0:30,0:30:78.10:0,78,776	0/0:29,0:29:84.19:0,84,857	0/0:33,0:33:96.20:0,96,972	0/0:40,0:40:99:0,114,1163	0/0:35,0:35:93.20:0,93,947	0/0:20,0:20:51.12:0,51,520	1/1:2,26:28:78.25:981,78,0	1/1:2,26:28:75.24:944,75,0	1/1:2,28:30:82.14:1050,82,0	0/0:23,0:23:69.16:0,69,704	0/0:26,0:26:69.14:0,69,697	0/0:17,0:17:45.09:0,45,453	0/0:20,0:20:57.13:0,57,581	0/0:34,0:34:99:0,99,1010	1/1:1,28:29:87.27:1082,87,0	0/0:1,0:1:3.01:0,3,31
chr10	50637963	.	G	GT	1420.51	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=8.993;DP=811;FS=3.011;HRun=1;HaplotypeScore=81.8662;InbreedingCoeff=0.9996;MQ=80.28;MQ0=0;MQRankSum=-0.505;QD=34.65;ReadPosRankSum=1.633;VQSLOD=3.7830;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:58:99:0,174,2206	0/0:15,0:15:45.12:0,45,567	0/0:21,0:21:47.62:0,48,546	0/0:19,0:19:54.08:0,54,598	0/0:27,0:27:75.24:0,75,974	0/0:23,0:23:63.20:0,63,818	0/0:33,0:33:96.31:0,96,1247	0/0:38,0:38:99:0,111,1428	0/0:38,0:38:99:0,114,1461	0/0:35,0:35:99:0,105,1351	0/0:22,0:22:60.19:0,60,779	0/0:40,0:40:99:0,117,1518	0/0:37,0:37:99:0,111,1426	0/0:41,0:41:99:0,123,1582	0/0:49,0:49:99:0,147,1908	1/1:1,40:41:99:1515,108,0	0/0:27,0:27:75.24:0,75,971	0/0:14,0:14:39.13:0,39,506	0/0:21,0:20:63.18:0,63,801	0/0:23,0:23:69.22:0,69,895	0/0:37,0:37:99:0,102,1324	0/0:25,0:25:69.22:0,69,895	0/0:23,0:23:69.22:0,69,896	0/0:21,0:21:60.18:0,60,764	0/0:21,0:21:63.20:0,63,817	0/0:17,0:17:51.17:0,51,662	0/0:34,0:34:99:0,99,1271	0/0:11,0:11:33.09:0,33,411
chr10	50638226	.	GCACACACACACACACACA	G	2637.46	PASS	AB=0.952;AC=13;AF=0.241;AN=54;BaseQRankSum=8.008;DP=539;FS=22.590;HRun=0;HaplotypeScore=231.4627;InbreedingCoeff=0.2313;MQ=63.73;MQ0=11;MQRankSum=-6.666;QD=12.99;ReadPosRankSum=-0.243;VQSLOD=1.0883;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:27.09:0,27,1286	1/1:3,7:10:12.04:472,12,0	./.	0/0:32,0:28:6.02:0,6,85	0/0:18,0:18:27.09:0,27,1322	0/1:16,0:14:19.16:19,0,32	0/1:23,0:23:16.84:141,0,17	0/0:21,0:19:7.79:0,8,102	0/1:15,0:15:22.39:92,0,22	0/0:14,0:14:17.74:0,18,540	0/0:9,0:8:18.05:0,18,595	0/0:15,0:19:24.06:0,24,487	0/0:12,0:12:12.04:0,12,311	0/0:15,0:14:18.06:0,18,1099	0/1:16,16:32:62.95:989,0,63	1/1:17,0:28:16.09:626,16,0	0/0:26,0:26:51.17:0,51,2164	0/0:11,0:14:24.04:0,24,1181	0/1:11,0:9:3.90:26,0,4	0/1:17,0:15:9.75:162,0,10	0/1:28,0:27:14.88:34,0,15	0/0:17,0:20:18.06:0,18,378	0/0:13,0:13:6.02:0,6,101	0/0:21,0:33:18.04:0,18,315	0/0:14,0:14:12.04:0,12,792	0/0:12,0:11:9.38:0,9,653	1/1:23,0:22:1.66:234,2,0	0/0:9,0:9:18.06:0,18,830
chr10	50638265	.	CACACACACACACA	C	4558.04	PASS	AB=0.984;AC=18;AF=0.321;AN=56;BaseQRankSum=7.956;DP=636;FS=9.490;HRun=0;HaplotypeScore=172.0722;InbreedingCoeff=0.6091;MQ=47.50;MQ0=55;MQRankSum=-7.312;QD=18.91;ReadPosRankSum=2.319;VQSLOD=2.6749;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:34:80.11:0,80,2323	0/1:14,0:13:99:221,0,129	0/0:33,0:5:15.04:0,15,174	0/0:37,0:8:9.81:0,10,221	0/0:27,0:27:66.22:0,66,1816	1/1:10,0:6:18.06:312,18,0	1/1:5,29:31:15.05:626,15,0	1/1:25,0:13:6.56:372,7,0	1/1:3,16:18:5.05:423,5,0	0/0:16,0:15:45.15:0,45,1237	0/0:13,0:11:27.08:0,27,679	0/0:32,0:30:47.32:0,47,897	0/0:15,0:15:33.99:0,34,554	0/0:27,0:25:60.20:0,60,1727	0/1:28,0:27:99:524,0,284	0/1:25,0:24:99:358,0,316	0/0:32,0:32:82.08:0,82,3000	0/0:24,0:23:37.09:0,37,2026	1/1:7,13:18:26.44:488,26,0	1/1:3,8:11:9.03:237,9,0	0/1:27,0:19:18.87:185,0,19	0/0:18,0:17:27.14:0,27,533	0/0:11,0:11:24.08:0,24,400	0/0:37,0:37:36.99:0,37,642	0/0:13,0:12:30.33:0,30,1092	0/0:13,0:11:27.76:0,28,907	1/1:6,17:20:20.99:810,21,0	0/0:11,0:11:24.75:0,25,1151
chr10	50638277	.	CA	C	1183.06	PASS	AB=0.746;AC=15;AF=0.268;AN=56;BaseQRankSum=6.586;DP=654;FS=16.868;HRun=1;HaplotypeScore=94.2917;InbreedingCoeff=0.6605;MQ=59.28;MQ0=51;MQRankSum=-6.318;QD=6.54;ReadPosRankSum=-0.551;VQSLOD=-0.7421;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:39:88.83:0,89,1083	0/0:12,0:12:14.15:0,14,152	0/0:45,0:17:50.82:0,51,587	0/0:46,0:17:42.70:0,43,506	0/0:23,0:23:57.18:0,57,744	0/1:3,8:4:3.88:108,0,4	1/1:31,2:30:14.94:113,15,0	1/1:7,17:13:30.36:400,30,0	1/1:18,0:17:8.97:68,9,0	0/0:17,0:17:51.15:0,51,626	0/0:13,0:11:27.09:0,27,354	0/0:29,0:28:58.18:0,58,674	0/0:13,0:13:20.23:0,20,302	0/0:26,0:24:51.57:0,52,726	0/0:34,0:33:0.53:0,1,404	0/0:27,0:26:31.20:0,31,402	0/0:29,0:29:57.31:0,57,754	0/0:27,0:26:63.62:0,64,778	1/1:19,0:18:29.08:345,29,0	1/1:11,0:10:2.99:23,3,0	0/1:15,16:19:21.82:145,0,22	0/0:16,0:15:10.45:0,10,215	0/0:10,0:10:27.08:0,27,331	0/0:39,0:39:55.41:0,55,656	0/0:13,0:12:30.02:0,30,402	0/0:14,0:12:27.77:0,28,387	1/1:21,1:20:17.56:146,18,0	0/1:12,0:12:17.31:17,0,253
chr10	50638925	.	CTG	C	426.67	PASS	AB=0.980;AC=19;AF=0.365;AN=52;BaseQRankSum=1.229;DP=705;FS=3.060;HRun=0;HaplotypeScore=102.9100;InbreedingCoeff=0.3465;MQ=64.63;MQ0=10;MQRankSum=1.299;QD=1.60;ReadPosRankSum=0.785;VQSLOD=1.9043;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:37.14:0,37,316	1/1:9,3:12:3.01:33,3,0	./.	./.	1/1:14,0:16:2.84:14,3,0	0/0:18,0:18:12.02:0,12,147	0/0:26,0:26:6.02:0,6,89	0/0:32,0:31:0:0,0,0	1/1:16,6:22:9.02:96,9,0	0/0:28,0:28:12.63:0,13,123	0/0:18,1:18:15.01:0,15,218	0/0:18,0:24:5.94:0,6,45	0/0:17,0:27:8.96:0,9,73	0/1:24,3:27:53.52:54,0,71	1/1:20,6:28:5.20:84,5,0	0/0:34,0:34:8.81:0,9,87	0/0:29,0:28:20.85:0,21,232	0/1:12,0:13:28.74:29,0,198	1/1:31,0:31:5.80:33,6,0	1/1:13,1:14:5.85:47,6,0	0/1:47,0:47:23.12:23,0,222	0/0:25,0:25:15.45:0,15,160	0/0:9,0:20:3:0,3,26	0/0:19,0:36:8.98:0,9,73	0/0:15,0:15:15.01:0,15,195	0/1:22,0:22:11.27:11,0,199	1/1:18,9:27:14.87:144,15,0	0/1:7,0:7:23.58:24,0,47
chr10	50639884	.	GGT	G	122.61	PASS	AB=0.969;AC=18;AF=0.375;AN=48;BaseQRankSum=1.960;DP=523;FS=10.997;HRun=0;HaplotypeScore=89.1184;InbreedingCoeff=0.1600;MQ=62.58;MQ0=18;MQRankSum=-0.846;QD=0.53;ReadPosRankSum=0.767;VQSLOD=0.9255;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:31:5.78:0,6,39	0/0:4,0:4:5.97:0,6,45	./.	./.	0/0:31,0:30:20.70:0,21,144	0/1:4,0:6:0:0,0,0	1/1:9,4:12:5.33:30,5,0	./.	0/0:11,0:11:3:0,3,25	0/0:16,0:16:14.89:0,15,116	0/1:11,0:11:2.64:3,0,29	0/1:27,0:27:10.80:11,0,147	0/1:22,0:21:10.92:11,0,106	0/0:25,0:25:14.60:0,15,251	0/0:15,0:15:2.99:0,3,24	0/0:22,0:22:26.83:0,27,205	0/1:26,0:26:9.09:9,0,132	0/1:23,0:20:61.18:61,0,70	1/1:13,0:13:8.22:41,8,0	1/1:8,0:7:2.99:23,3,0	1/1:10,8:16:2.88:15,3,0	0/0:20,0:19:5.95:0,6,44	0/0:14,0:14:8.95:0,9,68	0/1:35,0:32:41.35:41,0,93	0/1:15,0:14:2.90:3,0,74	0/0:26,0:24:16.61:0,17,165	1/1:9,0:13:2.58:15,3,0	./.
chr10	50639930	.	TGAGAGAGAGA	T	184.84	PASS	AB=0.803;AC=5;AF=0.104;AN=48;BaseQRankSum=2.823;DP=438;FS=7.610;HRun=0;HaplotypeScore=138.5666;InbreedingCoeff=0.4405;MQ=43.06;MQ0=29;MQRankSum=-0.978;QD=2.12;ReadPosRankSum=-0.745;VQSLOD=2.0551;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:19:9.50:0,10,332	./.	./.	./.	0/0:27,0:24:9.03:0,9,369	0/0:7,0:7:5.53:0,6,146	0/0:22,0:20:9.26:0,9,444	0/0:15,0:14:24.01:0,24,614	0/0:6,0:6:0:0,0,0	0/0:14,0:14:26.97:0,27,894	0/0:13,0:13:7.27:0,7,122	1/1:19,1:20:6:76,6,0	0/1:18,2:22:8.47:199,0,8	0/0:31,0:30:24.07:0,24,840	./.	0/0:15,0:15:5.89:0,6,163	0/0:22,0:23:28.65:0,29,937	0/0:27,0:22:39.09:0,39,1295	0/0:13,0:12:15.05:0,15,616	0/0:6,0:6:0.47:0,0,1	0/0:18,0:17:9.03:0,9,421	0/0:11,1:12:0:0,0,0	0/1:7,6:15:0:0,0,0	0/1:27,2:26:0.14:0,0,0	0/0:14,0:13:12.03:0,12,281	0/0:33,0:28:39.13:0,39,1399	0/0:12,0:12:13.64:0,14,461	0/0:7,0:3:6.07:0,6,98
chr10	50639989	.	T	TGGG	2114.79	PASS	AB=0.966;AC=19;AF=0.339;AN=56;BaseQRankSum=4.748;DP=376;FS=0.000;HRun=5;HaplotypeScore=75.4937;InbreedingCoeff=0.3559;MQ=58.98;MQ0=10;MQRankSum=-1.850;QD=12.97;ReadPosRankSum=0.283;VQSLOD=-0.6616;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:15,0:15:38.36:38,0,103	0/0:3,0:3:5.95:0,6,57	0/0:32,0:14:13.66:0,14,498	0/0:29,0:15:28.28:0,28,416	0/0:13,0:13:13.28:0,13,365	0/0:4,0:4:7.20:0,7,85	0/1:9,3:13:47.51:48,0,176	0/1:19,0:17:99:225,0,159	0/1:8,0:8:82.73:83,0,83	0/0:14,0:14:29.96:0,30,407	0/0:14,0:14:30.09:0,30,445	1/1:7,5:12:28.78:501,29,0	1/1:6,9:15:29.69:475,30,0	0/0:16,0:16:41.97:0,42,636	1/1:9,0:9:2.98:9,3,0	0/1:7,0:7:7.77:8,0,200	0/0:14,0:14:32.57:0,33,491	0/0:19,0:17:48.16:0,48,748	0/1:7,0:7:32.55:85,0,33	0/0:13,0:13:25.89:0,26,314	0/1:13,0:13:82.49:82,0,157	1/1:5,7:11:14.88:246,15,0	1/1:14,0:14:23.76:294,24,0	1/1:6,12:17:9.03:206,9,0	0/0:12,0:12:27.55:0,28,392	0/0:16,0:16:6.05:0,6,291	0/0:8,0:8:20.97:0,21,215	0/0:5,0:5:9.01:0,9,114
chr10	50639990	.	G	GGGGGTGGTAGTA	1421.67	PASS	AB=0.972;AC=19;AF=0.339;AN=56;BaseQRankSum=3.893;DP=383;FS=15.721;HRun=0;HaplotypeScore=132.3099;InbreedingCoeff=0.0648;MQ=58.79;MQ0=10;MQRankSum=-5.313;QD=7.40;ReadPosRankSum=-1.681;VQSLOD=1.1916;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:15,0:15:11.75:86,0,12	1/1:3,0:3:7.27:116,7,0	0/0:29,0:14:17.11:0,17,568	0/0:29,0:14:31.31:0,31,419	0/0:12,0:13:36.02:0,36,695	0/0:4,0:4:1.25:0,1,57	0/1:12,0:12:61.96:62,0,177	1/1:22,0:19:14.89:358,15,0	0/1:8,0:10:47.56:50,0,48	0/0:13,0:14:24:0,24,630	0/0:13,0:13:24.08:0,24,595	0/1:12,0:12:99:155,0,151	0/1:15,0:15:99:109,0,101	0/0:16,0:16:42.10:0,42,1074	1/1:1,7:15:6.79:174,7,0	0/1:7,0:7:56.76:57,0,171	0/0:14,0:14:33.11:0,33,760	0/0:19,0:17:51.14:0,51,1214	1/1:7,0:7:11.96:138,12,0	0/0:14,0:14:22.27:0,22,349	0/1:12,0:12:99:150,0,208	0/1:12,0:11:29.01:29,0,66	0/1:13,0:13:65.88:66,0,148	0/1:21,0:19:32.11:39,0,32	0/0:13,0:13:24.01:0,24,636	0/1:9,0:16:7.57:8,0,440	0/0:7,0:7:17.94:0,18,239	0/0:5,0:5:12.02:0,12,245
chr10	50641453	.	A	AT	19686.03	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-14.725;DP=695;FS=4.378;HRun=0;HaplotypeScore=72.5056;InbreedingCoeff=0.9986;MQ=79.78;MQ0=0;MQRankSum=-4.334;QD=42.70;ReadPosRankSum=1.905;VQSLOD=5.6503;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,56:56:99:2438,157,0	1/1:0,9:9:24.08:375,24,0	0/0:26,0:26:72.20:0,72,937	0/0:19,0:19:47.30:0,47,654	0/0:25,0:25:72.23:0,72,982	1/1:0,19:19:54.18:844,54,0	1/1:1,31:32:84.29:1314,84,0	1/1:0,27:27:81.24:1222,81,0	1/1:1,23:24:63.21:985,63,0	0/0:26,0:26:78.24:0,78,1060	0/0:16,0:16:45.14:0,45,611	1/1:1,19:20:51.17:798,51,0	1/1:0,24:24:60.20:939,60,0	0/0:23,0:23:69.21:0,69,926	1/1:1,29:30:81.28:1267,81,0	1/1:0,22:22:66.22:1017,66,0	0/0:20,0:20:60.19:0,60,823	0/0:28,0:28:78.24:0,78,1072	1/1:0,28:28:84.29:1313,84,0	1/1:0,23:23:66.16:1001,66,0	1/1:0,36:36:99:1592,102,0	1/1:0,19:19:51.09:768,51,0	1/1:1,25:26:69.23:1079,69,0	1/1:1,34:35:93.32:1454,93,0	0/0:22,0:22:66.20:0,66,892	0/0:23,0:23:69.22:0,69,945	1/1:2,28:31:84.26:1282,84,0	0/0:6,0:6:18.06:0,18,251
chr10	50641780	.	TG	T	5564.43	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=12.301;DP=576;FS=1.978;HRun=4;HaplotypeScore=58.9451;InbreedingCoeff=0.9992;MQ=79.49;MQ0=0;MQRankSum=-2.411;QD=32.35;ReadPosRankSum=2.279;VQSLOD=5.5433;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:66.22:0,66,912	0/0:9,0:9:21.07:0,21,294	0/0:18,0:18:48.13:0,48,651	0/0:12,0:12:36.11:0,36,477	0/0:25,0:25:69.20:0,69,931	1/1:1,19:20:48.15:574,48,0	1/1:2,33:35:93.26:1103,93,0	0/0:24,0:24:72.23:0,72,994	1/1:0,24:24:72.22:864,72,0	0/0:19,0:19:57.18:0,57,776	0/0:15,0:15:42.14:0,42,588	1/1:2,17:19:48.15:576,48,0	1/1:0,11:11:30.09:360,30,0	0/0:26,0:26:72.24:0,72,1007	0/0:21,0:21:60.20:0,60,840	0/0:23,0:23:66.20:0,66,906	0/0:31,0:31:90.28:0,90,1242	0/0:14,0:14:39.13:0,39,546	0/0:17,0:17:45.10:0,45,592	0/0:21,0:21:54.15:0,54,721	0/0:18,0:18:51.14:0,51,679	1/1:0,22:22:57.17:684,57,0	1/1:1,20:21:57.17:684,57,0	1/1:0,20:20:60.18:720,60,0	0/0:18,0:18:54.13:0,54,703	0/0:29,0:29:84.28:0,84,1176	0/0:27,0:27:81.27:0,81,1131	0/0:13,0:13:39.13:0,39,546
chr10	50642073	.	GCA	G	1054.99	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.393;DP=594;FS=0.000;HRun=0;HaplotypeScore=68.0597;InbreedingCoeff=0.9996;MQ=84.13;MQ0=0;MQRankSum=-3.195;QD=36.38;ReadPosRankSum=1.403;VQSLOD=5.4662;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:84.29:0,84,1505	1/1:0,10:10:30.10:420,30,0	0/0:21,0:20:51.10:0,51,780	0/0:15,0:15:45.15:0,45,802	0/0:37,0:37:99:0,105,1882	0/0:15,0:15:42.14:0,42,751	0/0:20,0:20:54.17:0,54,942	0/0:33,0:33:96.33:0,96,1724	0/0:19,0:19:51.15:0,51,860	0/0:19,0:19:57.18:0,57,998	0/0:21,0:21:60.19:0,60,1042	0/0:15,0:15:45.15:0,45,805	0/0:18,0:18:48.16:0,48,864	0/0:27,0:27:75.24:0,75,1321	1/1:1,18:19:54.18:756,54,0	0/0:19,0:19:54.17:0,54,936	0/0:26,0:26:72.25:0,72,1289	0/0:18,0:18:54.16:0,54,940	0/0:14,0:14:39.13:0,39,703	0/0:31,0:31:81.28:0,81,1459	0/0:13,0:13:39.13:0,39,702	0/0:29,0:29:87.30:0,87,1556	0/0:24,0:24:66.20:0,66,1158	0/0:19,0:19:51.17:0,51,915	0/0:20,0:20:57.20:0,57,1020	0/0:25,0:25:75.26:0,75,1348	0/0:20,0:20:60.21:0,60,1080	0/0:17,0:17:48.16:0,48,862
chr10	50643743	.	TTTA	T	1507.23	PASS	AB=0.746;AC=29;AF=0.725;AN=40;BaseQRankSum=4.950;DP=269;FS=0.000;HRun=0;HaplotypeScore=60.9020;InbreedingCoeff=0.3204;MQ=71.71;MQ0=3;MQRankSum=-1.559;QD=8.92;ReadPosRankSum=2.821;VQSLOD=2.5587;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:15.05:0,15,279	./.	./.	./.	0/1:5,2:8:48.60:70,0,49	1/1:4,0:13:20.83:147,21,0	1/1:4,0:5:2.98:21,3,0	./.	1/1:2,0:4:5.95:42,6,0	1/1:8,5:13:15.05:198,15,0	1/1:6,0:7:5.99:61,6,0	0/0:8,0:8:9.03:0,9,173	0/1:12,1:13:21.52:22,0,270	1/1:6,2:8:3.01:40,3,0	0/0:8,0:9:8.99:0,9,107	0/0:9,0:9:2.04:0,2,6	0/1:4,10:14:36.60:198,0,37	1/1:16,8:24:20.99:239,21,0	1/1:7,0:8:2.98:21,3,0	1/1:4,0:6:2.98:21,3,0	./.	./.	1/1:6,0:6:2.98:21,3,0	./.	1/1:10,3:13:9.03:119,9,0	./.	1/1:5,0:15:26.65:188,27,0	1/1:6,6:12:18.06:238,18,0
chr10	50644754	.	CT	C	1267.59	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=0.230;DP=603;FS=1.021;HRun=13;HaplotypeScore=93.2821;InbreedingCoeff=0.9010;MQ=68.40;MQ0=1;MQRankSum=3.543;QD=9.98;ReadPosRankSum=3.830;VQSLOD=3.3395;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,16:21:31.79:225,32,0	0/0:3,0:5:11.60:0,12,69	0/0:18,1:13:1.33:0,1,49	0/0:11,0:10:0.47:0,0,2	0/0:34,0:34:53.21:0,53,633	0/0:6,0:18:26.10:0,26,151	0/0:15,0:28:49.16:0,49,286	0/0:22,0:26:43.24:0,43,280	0/0:11,0:22:23.15:0,23,135	0/0:19,1:20:36.22:0,36,372	0/0:19,0:19:21.39:0,21,355	1/1:4,8:12:11.88:87,12,0	1/1:7,23:30:41.64:306,42,0	0/0:18,0:18:45.02:0,45,417	0/0:8,0:23:30.16:0,30,168	0/0:4,0:30:54.04:0,54,272	0/0:31,0:31:66.09:0,66,636	0/0:22,4:27:17.52:0,18,303	0/0:11,0:22:41.73:0,42,243	0/0:6,0:21:41.59:0,42,208	0/0:4,0:12:17.03:0,17,89	1/1:6,16:22:29.74:219,30,0	1/1:5,16:21:35.75:263,36,0	1/1:3,18:21:47.71:350,48,0	0/0:27,1:28:37.22:0,37,490	0/0:26,0:29:41.89:0,42,389	0/0:16,0:28:37.75:0,38,222	0/0:4,0:4:12:0,12,105
chr10	50646589	.	A	ATG	1913.06	PASS	AB=1.000;AC=12;AF=0.214;AN=56;BaseQRankSum=19.125;DP=824;FS=79.276;HRun=0;HaplotypeScore=134.4171;InbreedingCoeff=0.3646;MQ=83.79;MQ0=0;MQRankSum=-1.583;QD=6.44;ReadPosRankSum=2.693;VQSLOD=0.3069;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,138,2098	0/0:15,0:15:45.15:0,45,728	0/0:27,0:26:47.82:0,48,1030	0/0:24,0:23:63.02:0,63,958	0/0:24,0:24:69.21:0,69,1083	1/1:22,0:22:38.78:116,39,0	0/1:27,0:27:45.27:68,0,45	0/1:34,0:34:30.09:30,0,61	0/1:37,0:37:99:107,0,110	0/0:28,0:28:84.10:0,84,1230	0/0:13,0:13:39.12:0,39,606	0/0:31,0:31:87.26:0,87,1347	0/0:31,0:31:93.32:0,93,1504	0/0:39,0:39:99:0,114,1776	0/0:46,0:45:99:0,132,2061	1/1:6,35:42:79.15:1338,79,0	0/0:32,0:32:90.22:0,90,1401	0/0:30,0:30:87.30:0,87,1417	0/1:29,0:29:16.72:17,0,170	0/1:25,0:25:46.63:70,0,47	1/1:50,0:50:61.29:224,61,0	0/0:21,0:21:60.19:0,60,952	0/0:23,0:23:60.20:0,60,977	0/0:36,0:36:99:0,108,1646	0/0:25,0:25:75.26:0,75,1214	0/0:28,0:28:81.25:0,81,1270	0/1:31,0:31:33.07:112,0,33	0/0:7,0:7:21.05:0,21,317
chr10	50646590	.	C	CGT	13045.44	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-9.552;DP=840;FS=0.000;HRun=0;HaplotypeScore=101.3608;InbreedingCoeff=0.9987;MQ=83.85;MQ0=0;MQRankSum=-1.558;QD=41.81;ReadPosRankSum=-1.315;VQSLOD=5.9663;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,120,1597	0/0:16,0:16:42.14:0,42,559	0/0:26,0:26:57.03:0,57,711	0/0:25,0:24:58.01:0,58,746	0/0:24,0:24:60.18:0,60,781	1/1:0,22:22:60.21:1039,60,0	1/1:2,26:29:69.24:1195,69,0	1/1:4,32:38:99:1691,102,0	1/1:5,32:37:93.32:1609,93,0	0/0:28,0:28:63.20:0,63,824	0/0:14,0:14:33.11:0,33,439	0/0:32,0:32:72.22:0,72,943	0/0:31,0:31:90.30:0,90,1196	0/0:39,0:39:99:0,102,1354	0/0:47,0:46:99:0,123,1620	1/1:44,1:45:90.31:1540,90,0	0/0:32,0:32:87.23:0,87,1122	0/0:30,0:30:90.26:0,90,1177	1/1:5,25:31:81.22:1304,81,0	1/1:2,23:25:54.18:928,54,0	1/1:2,49:52:99:2390,138,0	0/0:21,0:21:57.19:0,57,758	0/0:22,0:22:60.18:0,60,784	0/0:35,0:35:96.32:0,96,1276	0/0:26,0:26:72.24:0,72,958	0/0:28,0:28:75.24:0,75,985	1/1:2,31:33:78.27:1349,78,0	0/0:6,0:6:18.06:0,18,240
chr10	50647713	.	GA	G	5713.65	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=8.116;DP=565;FS=28.772;HRun=2;HaplotypeScore=86.6746;InbreedingCoeff=0.9995;MQ=78.75;MQ0=0;MQRankSum=-4.399;QD=31.92;ReadPosRankSum=0.388;VQSLOD=2.8393;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:84.23:0,84,1157	0/0:9,0:9:27.08:0,27,368	0/0:20,0:19:41.10:0,41,547	0/0:18,0:17:39.12:0,39,529	0/0:9,0:9:27.09:0,27,388	1/1:7,17:24:65.89:693,66,0	1/1:5,26:31:90.22:1111,90,0	1/1:2,20:22:57.12:675,57,0	1/1:1,17:18:51.12:636,51,0	0/0:14,0:14:38.99:0,39,525	0/0:17,0:17:45.15:0,45,637	0/0:19,0:19:54.13:0,54,738	0/0:16,0:16:47.37:0,47,648	0/0:22,0:22:65.94:0,66,907	0/0:34,0:34:99:0,99,1357	0/0:33,0:33:96.25:0,96,1318	0/0:32,0:32:76.89:0,77,1020	0/0:22,0:22:60.17:0,60,846	1/1:0,19:19:51.09:612,51,0	1/1:0,15:15:42.08:525,42,0	1/1:1,28:29:69.22:893,69,0	0/0:15,0:15:42.13:0,42,592	0/0:18,0:18:45.13:0,45,621	0/0:18,0:18:52.37:0,52,688	0/0:11,0:11:33.11:0,33,474	0/0:18,0:18:53.38:0,53,734	1/1:0,21:21:44.93:568,45,0	0/0:12,0:12:36.11:0,36,504
chr10	50647726	.	AG	A	1114.38	PASS	AB=0.904;AC=10;AF=0.179;AN=56;BaseQRankSum=4.817;DP=547;FS=4.472;HRun=10;HaplotypeScore=109.7298;InbreedingCoeff=0.5447;MQ=72.51;MQ0=0;MQRankSum=-5.299;QD=8.57;ReadPosRankSum=-0.896;VQSLOD=2.3637;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:46.19:0,46,244	0/0:7,0:7:17.82:0,18,131	0/0:14,0:14:27.63:0,28,215	0/1:15,1:15:2.06:2,0,146	0/0:10,0:10:17.98:0,18,176	1/1:3,20:23:53.98:469,54,0	1/1:9,18:27:50.89:431,51,0	0/0:21,0:21:35.07:0,35,209	1/1:1,19:20:32.97:286,33,0	0/0:11,1:12:12.03:0,12,127	0/1:15,0:15:7.87:8,0,148	0/0:23,0:23:34.19:0,34,173	0/0:15,0:15:31.60:0,32,174	0/0:20,1:21:16.91:0,17,382	0/0:33,1:34:68.49:0,68,570	0/0:25,0:25:67.89:0,68,448	0/0:34,1:35:45.98:0,46,663	0/1:17,2:19:22.04:22,0,230	0/0:26,0:26:52.95:0,53,353	0/0:16,0:16:26.80:0,27,210	0/0:29,0:29:61.95:0,62,395	0/0:18,0:18:31.21:0,31,154	0/0:15,0:15:21.13:0,21,101	0/0:23,0:23:42.61:0,43,210	0/0:10,0:10:15:0,15,165	0/1:7,3:10:54.07:54,0,142	0/0:26,1:27:36.01:0,36,364	0/0:9,0:9:24.05:0,24,256
chr10	50647736	.	G	GC	4245.65	PASS	AB=1.000;AC=27;AF=0.482;AN=56;BaseQRankSum=-3.716;DP=576;FS=3.517;HRun=0;HaplotypeScore=103.2705;InbreedingCoeff=0.6057;MQ=73.59;MQ0=0;MQRankSum=-2.499;QD=11.00;ReadPosRankSum=-1.324;VQSLOD=4.5555;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,32:36:42.14:567,42,0	0/0:6,0:6:8.69:0,9,37	0/0:13,0:13:17.50:0,17,240	0/0:16,0:16:25.21:0,25,288	0/0:10,0:10:15.05:0,15,249	1/1:22,0:22:55.32:271,55,0	1/1:26,0:26:65.32:383,65,0	1/1:20,0:20:17.93:187,18,0	1/1:22,0:22:39.14:209,39,0	0/0:15,0:15:42.05:0,42,420	0/0:13,0:13:32.82:0,33,337	1/1:1,19:20:32.52:450,33,0	1/1:2,16:18:19.26:346,19,0	0/0:24,0:24:56.34:0,56,614	0/1:35,0:35:35.21:62,0,35	0/1:27,0:27:40.17:46,0,40	0/0:34,0:34:86.92:0,87,958	0/0:20,0:20:53.80:0,54,535	0/1:25,0:25:25.70:155,0,26	0/1:15,0:15:6.26:6,0,54	1/1:32,0:32:0.18:181,0,0	1/1:2,19:21:33.09:441,33,0	1/1:0,15:15:21.07:282,21,0	1/1:0,22:23:45.13:602,45,0	0/0:10,0:10:27.03:0,27,306	0/0:13,0:13:35.80:0,36,358	0/1:29,0:29:30.41:58,0,30	0/0:15,0:15:41.99:0,42,452
chr10	50650327	.	G	GTC	10323.89	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=0.411;DP=735;FS=8.187;HRun=0;HaplotypeScore=128.9861;InbreedingCoeff=0.9578;MQ=70.07;MQ0=25;MQRankSum=-1.785;QD=25.94;ReadPosRankSum=0.805;VQSLOD=5.9467;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:36,1:37:63.20:944,63,0	1/1:12,3:15:39.13:624,39,0	0/0:63,0:26:24.19:0,24,425	0/0:91,0:43:30.07:0,30,856	0/0:21,0:21:48.14:0,48,598	1/1:11,0:11:21.06:287,21,0	1/1:26,0:26:66.12:938,66,0	1/1:34,0:34:81.23:1282,81,0	1/1:18,0:18:27:375,27,0	0/0:26,0:25:60.18:0,60,758	0/0:16,0:16:42.04:0,42,498	1/1:20,0:20:41.94:570,42,0	1/1:17,0:17:33.05:441,33,0	0/0:27,0:27:42.02:0,42,513	1/1:5,30:35:3.01:51,3,0	1/1:35,2:37:75.09:1127,75,0	0/0:20,0:20:44.01:0,44,580	0/0:18,0:18:24.08:0,24,308	1/1:19,0:19:35.85:459,36,0	1/1:9,0:8:18.02:258,18,0	1/1:24,4:28:6.15:588,6,0	1/1:24,0:23:42.10:582,42,0	1/1:15,0:15:24.08:358,24,0	1/1:22,2:24:36.12:547,36,0	0/0:15,0:15:39.10:0,39,480	0/0:23,0:23:51.08:0,51,634	1/1:29,0:29:68.61:893,69,0	0/0:17,0:17:36.11:0,36,464
chr10	50650334	.	TC	T	1672.52	PASS	AB=0.955;AC=25;AF=0.446;AN=56;BaseQRankSum=7.851;DP=733;FS=10.778;HRun=2;HaplotypeScore=132.2154;InbreedingCoeff=0.4122;MQ=66.76;MQ0=34;MQRankSum=1.276;QD=4.54;ReadPosRankSum=1.398;VQSLOD=-0.3524;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:38,0:38:24.66:103,0,25	0/1:14,1:15:11.75:37,0,12	0/0:59,0:22:54.39:0,54,584	0/0:86,1:39:39.99:0,40,963	0/0:22,0:21:47.93:0,48,640	1/1:7,5:12:15.21:73,15,0	1/1:26,1:26:45.94:198,46,0	0/1:30,1:31:1.10:203,0,1	1/1:13,5:18:23.41:108,23,0	0/0:27,0:26:68.11:0,68,822	0/0:19,0:18:41.53:0,42,491	1/1:15,3:18:40.19:236,40,0	1/1:13,3:16:18.36:101,18,0	0/0:29,0:29:50.40:0,50,634	0/0:36,0:36:4.56:0,5,17	0/1:39,0:38:57.90:155,0,58	0/0:24,0:22:27.50:0,28,689	0/1:19,1:18:9.66:10,0,324	0/1:17,0:16:20.74:21,0,119	0/1:8,1:8:23.04:28,0,23	0/1:24,1:25:9.02:76,0,9	1/1:21,3:23:29.42:154,29,0	1/1:9,2:10:19.78:98,20,0	1/1:19,2:21:24.99:106,25,0	0/0:14,4:18:38.85:0,39,507	0/0:28,0:27:78.09:0,78,974	0/1:23,4:27:1.76:164,0,2	0/0:16,0:15:42.14:0,42,560
chr10	50650335	.	CCTCTCT	C	306.07	PASS	AB=1.000;AC=22;AF=0.478;AN=46;BaseQRankSum=3.540;DP=750;FS=1.146;HRun=0;HaplotypeScore=192.1091;InbreedingCoeff=0.3891;MQ=64.89;MQ0=36;MQRankSum=-0.801;QD=1.16;ReadPosRankSum=-0.145;VQSLOD=2.7573;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:27.08:0,27,582	0/0:18,0:18:15.99:0,16,322	./.	./.	0/0:22,0:21:12.04:0,12,262	1/1:16,0:16:3.53:30,4,0	./.	./.	1/1:20,0:20:3.62:70,4,0	0/1:27,0:26:5.51:6,0,245	0/1:19,0:18:35.36:35,0,267	1/1:18,0:18:6.02:82,6,0	1/1:18,0:18:2.38:52,2,0	0/0:29,0:29:12.04:0,12,313	0/0:35,0:34:3.01:0,3,84	0/0:39,0:38:27.47:0,27,482	0/0:23,0:22:32.89:0,33,616	1/1:14,6:18:0.89:2,1,0	./.	1/1:9,0:8:2.96:19,3,0	0/1:27,0:26:15.38:15,0,39	1/1:25,0:24:2.85:19,3,0	0/1:12,0:11:0:0,0,0	1/1:24,0:23:0.90:3,1,0	0/0:19,0:19:9.03:0,9,220	0/0:28,0:27:30.57:0,31,703	1/1:28,0:28:2.31:113,2,0	0/0:18,0:16:6.02:0,6,96
chr10	50650338	.	CTCTCT	C	1224.09	PASS	AB=0.970;AC=24;AF=0.429;AN=56;BaseQRankSum=9.250;DP=769;FS=11.737;HRun=0;HaplotypeScore=180.8879;InbreedingCoeff=0.4131;MQ=61.75;MQ0=40;MQRankSum=3.397;QD=3.20;ReadPosRankSum=0.573;VQSLOD=2.0505;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:39,0:39:27.60:28,0,663	0/1:19,0:19:37.42:37,0,348	0/0:55,0:18:44.25:0,44,478	0/0:83,0:35:75.59:0,76,879	0/0:22,0:21:42.07:0,42,713	1/1:12,1:17:17.15:63,17,0	1/1:27,0:27:37.02:139,37,0	0/1:29,0:29:1.36:197,0,1	1/1:17,1:21:8.70:100,9,0	0/0:27,0:26:69.48:0,69,1018	0/0:19,0:18:21.28:0,21,561	1/1:17,3:19:26.70:148,27,0	1/1:17,2:20:14.57:92,15,0	0/0:29,0:29:42.61:0,43,728	0/0:34,0:33:2.88:0,3,95	0/1:39,0:37:62.32:62,0,588	0/0:27,0:25:66.13:0,66,1221	0/0:20,0:17:30.95:0,31,361	0/1:19,0:17:32.71:33,0,89	0/1:11,0:11:16.56:32,0,17	0/1:29,0:28:35.80:82,0,36	1/1:20,2:22:23.41:104,23,0	1/1:11,2:12:15.44:55,15,0	1/1:26,1:24:18.32:75,18,0	0/0:18,0:18:32.95:0,33,552	0/0:31,0:30:87.28:0,87,1620	0/1:23,1:27:15.63:175,0,16	0/0:21,0:19:48.72:0,49,641
chr10	50650384	.	CTGTGTGAG	C	1028.94	PASS	AB=1.000;AC=15;AF=0.278;AN=54;BaseQRankSum=-5.216;DP=553;FS=42.100;HRun=0;HaplotypeScore=192.9521;InbreedingCoeff=-0.1946;MQ=41.16;MQ0=22;MQRankSum=-4.996;QD=3.50;ReadPosRankSum=-2.213;VQSLOD=1.2035;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:31,0:30:39.60:40,0,132	0/1:10,0:10:75.90:76,0,79	./.	0/0:13,0:2:3:0,3,28	0/1:19,0:18:2.44:2,0,294	0/0:19,0:18:17.86:0,18,244	0/0:21,0:20:20.87:0,21,505	0/1:24,0:23:80.50:80,0,293	0/1:25,0:25:3.69:4,0,558	0/1:23,0:23:23.90:24,0,833	0/1:13,0:13:12.47:12,0,198	0/0:21,0:19:22.35:0,22,677	0/0:25,0:24:4.83:0,5,466	0/1:18,0:18:19.79:20,0,438	0/0:18,0:17:9.02:0,9,233	1/1:20,14:33:36.01:664,36,0	0/0:24,0:23:21.76:0,22,840	0/0:15,0:14:15.05:0,15,338	0/1:18,0:17:59.54:60,0,322	0/0:13,0:12:15:0,15,290	0/0:29,0:26:6.65:0,7,519	0/1:20,0:19:20.72:21,0,86	0/0:12,0:11:12.04:0,12,281	0/0:20,0:16:20.80:0,21,415	0/0:25,0:25:15.35:0,15,694	0/1:31,0:30:99:124,0,783	0/1:19,0:18:50.98:51,0,524	0/1:9,0:8:0.93:1,0,255
chr10	50650651	.	GGA	G	191.57	PASS	AB=0.967;AC=20;AF=0.385;AN=52;BaseQRankSum=6.113;DP=654;FS=51.543;HRun=0;HaplotypeScore=102.0717;InbreedingCoeff=0.4337;MQ=71.87;MQ0=8;MQRankSum=-5.213;QD=0.69;ReadPosRankSum=-0.028;VQSLOD=-0.2156;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:17.63:0,18,182	0/0:14,0:14:14.63:0,15,137	./.	./.	0/1:19,0:19:18.21:18,0,28	1/1:22,0:22:8.52:42,9,0	1/1:26,0:26:8.83:40,9,0	0/0:28,0:28:15.04:0,15,175	1/1:19,0:19:5.68:28,6,0	0/1:20,0:18:22.77:23,0,51	0/0:17,0:17:6.02:0,6,89	1/1:24,0:24:13.80:63,14,0	1/1:24,0:24:8.52:42,9,0	0/1:27,2:28:2.30:2,0,365	0/0:26,0:26:13.16:0,13,119	0/0:29,0:29:49.21:0,49,411	0/1:25,1:27:58.52:59,0,169	0/0:33,1:32:17.57:0,18,545	0/0:15,0:15:3.01:0,3,38	0/0:21,0:17:11.32:0,11,91	0/0:20,0:20:10.08:0,10,66	1/1:30,0:29:2.84:14,3,0	1/1:20,0:20:2.84:14,3,0	1/1:16,0:16:2.71:14,3,0	0/0:23,0:24:5.16:0,5,161	0/0:19,0:18:15.04:0,15,197	0/0:13,0:13:0.21:0,0,61	0/0:14,0:12:10.28:0,10,130
chr10	50650688	.	GAGAGAGGA	G	3774.18	PASS	AB=0.991;AC=19;AF=0.339;AN=56;BaseQRankSum=6.970;DP=683;FS=20.632;HRun=0;HaplotypeScore=161.7867;InbreedingCoeff=-0.0672;MQ=61.70;MQ0=10;MQRankSum=-0.268;QD=9.88;ReadPosRankSum=-0.124;VQSLOD=1.0106;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:47,0:47:99:521,0,677	0/1:14,0:14:99:144,0,369	0/0:28,0:18:42.19:0,42,842	0/0:28,0:12:29.82:0,30,505	0/0:21,0:21:48.61:0,49,966	1/1:24,2:26:9.02:212,9,0	1/1:19,1:20:11.86:157,12,0	0/1:34,0:34:99:761,0,454	0/1:18,0:18:36.59:51,0,37	0/0:17,0:16:42.13:0,42,855	0/0:20,0:19:47.98:0,48,1000	0/1:29,1:30:7.04:231,0,7	0/1:26,1:27:13.13:141,0,13	0/0:34,0:33:78.26:0,78,2094	0/1:34,0:34:99:403,0,708	0/1:35,0:35:99:389,0,1087	0/0:26,0:24:69.24:0,69,1720	0/0:31,0:29:87.30:0,87,2505	0/1:19,0:18:99:267,0,166	0/1:12,0:10:99:155,0,239	0/0:23,0:22:24.08:0,24,475	0/1:17,0:16:18.77:26,0,19	0/1:12,0:12:22.83:23,0,40	1/1:18,0:18:2.74:31,3,0	0/0:20,0:20:40.90:0,41,1151	0/0:29,0:29:44.68:0,45,1812	0/1:18,1:19:99:262,0,368	0/0:24,0:23:69.17:0,69,1319
chr10	50650690	.	GAGAGGA	G	4615.44	PASS	AB=1.000;AC=24;AF=0.429;AN=56;BaseQRankSum=7.194;DP=649;FS=18.406;HRun=0;HaplotypeScore=133.3621;InbreedingCoeff=0.2920;MQ=65.41;MQ0=9;MQRankSum=1.022;QD=13.26;ReadPosRankSum=0.577;VQSLOD=2.7094;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:44,0:44:99:573,0,297	0/1:14,0:14:99:216,0,216	0/0:30,0:21:51.27:0,51,1000	0/0:29,0:13:32.67:0,33,500	0/0:20,0:20:48.56:0,49,814	1/1:3,18:21:9.03:191,9,0	1/1:3,12:15:12.04:250,12,0	0/1:34,0:34:99:764,0,295	1/1:1,11:12:6.02:153,6,0	0/0:15,0:14:42.13:0,42,707	0/0:20,0:19:41.97:0,42,835	1/1:3,22:25:14.80:337,15,0	1/1:1,22:23:8.65:210,9,0	0/0:33,0:33:74.84:0,75,1697	0/1:34,0:34:99:458,0,383	0/1:36,0:36:99:440,0,658	0/0:26,0:24:59.66:0,60,1264	0/0:33,0:31:93.30:0,93,2113	0/1:18,0:17:82.02:310,0,82	0/1:13,0:11:99:195,0,136	0/0:23,0:23:23.94:0,24,270	1/1:0,13:13:3.01:77,3,0	1/1:0,9:9:3.28:77,3,0	1/1:1,16:17:2.74:76,3,0	0/0:20,0:20:48.06:0,48,960	0/0:29,0:29:37.96:0,38,1417	0/1:20,0:20:99:288,0,176	0/0:23,0:22:66.18:0,66,1171
chr10	50650694	.	GGA	G	6303.78	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=9.298;DP=607;FS=9.304;HRun=0;HaplotypeScore=89.1603;InbreedingCoeff=0.8617;MQ=70.33;MQ0=8;MQRankSum=-0.865;QD=17.76;ReadPosRankSum=0.649;VQSLOD=4.3203;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:39,2:41:85.56:1113,86,0	1/1:13,1:14:25.44:371,25,0	0/0:33,0:24:60.23:0,60,1125	0/0:30,0:15:38.96:0,39,602	0/0:19,0:19:41.94:0,42,621	1/1:20,0:20:9.02:89,9,0	1/1:15,0:15:11.82:108,12,0	1/1:8,23:31:66.22:929,66,0	1/1:12,0:12:6.01:59,6,0	0/0:13,0:12:32.59:0,33,498	0/0:19,0:18:45.15:0,45,716	1/1:25,0:25:14.92:145,15,0	1/1:23,0:23:8.62:88,9,0	0/0:30,0:30:69.17:0,69,1102	1/1:32,1:33:59.90:907,60,0	1/1:24,1:32:70.85:889,71,0	0/0:19,0:17:47.98:0,48,715	0/0:27,0:25:65.64:0,66,1048	1/1:8,10:17:30.08:406,30,0	1/1:12,1:11:26.07:319,26,0	1/1:3,12:15:3:44,3,0	1/1:13,0:13:3.01:30,3,0	1/1:9,0:9:2.63:29,3,0	1/1:16,0:17:2.87:30,3,0	0/0:17,0:17:40:0,40,619	0/0:23,1:24:26.27:0,26,977	1/1:20,4:24:53.48:748,53,0	0/0:21,0:21:63.17:0,63,975
chr10	50650696	.	A	AG	1306.30	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=9.835;DP=565;FS=5.403;HRun=2;HaplotypeScore=98.8142;InbreedingCoeff=0.7725;MQ=73.64;MQ0=6;MQRankSum=3.111;QD=7.42;ReadPosRankSum=-1.716;VQSLOD=0.2874;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:32,0:32:51.24:257,51,0	1/1:12,0:12:15.46:86,15,0	0/0:34,0:25:72.17:0,72,894	0/0:31,0:16:39.04:0,39,473	0/0:18,0:18:41.89:0,42,533	0/0:20,0:20:1.41:0,1,3	0/0:13,0:13:2.71:0,3,6	1/1:25,0:25:36.71:169,37,0	0/0:11,0:11:0.94:0,1,2	0/0:12,0:11:33.11:0,33,428	0/0:17,0:17:45.15:0,45,583	0/0:25,0:25:2.89:0,3,7	0/0:24,0:24:0.87:0,1,3	0/0:28,0:28:69.19:0,69,865	1/1:29,0:29:45.69:227,46,0	1/1:23,7:30:47.83:366,48,0	0/0:18,0:16:48.16:0,48,623	0/0:26,0:24:69.13:0,69,856	1/1:12,0:11:19.51:69,20,0	1/1:12,0:11:11.60:62,12,0	0/0:13,0:13:1.55:0,2,4	0/0:13,0:13:0.47:0,0,1	0/0:9,0:9:0.47:0,0,2	0/0:17,0:17:0.47:0,0,1	0/0:17,0:17:40:0,40,490	0/0:22,0:22:60.63:0,61,762	1/1:24,0:24:27.74:252,28,0	0/0:21,0:21:63.20:0,63,818
chr10	50651580	.	CTTT	C	4833.24	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=0.519;DP=612;FS=10.820;HRun=12;HaplotypeScore=104.8649;InbreedingCoeff=0.9926;MQ=77.47;MQ0=0;MQRankSum=-1.309;QD=25.17;ReadPosRankSum=3.831;VQSLOD=2.9102;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,34:41:43.99:945,44,0	1/1:1,6:7:17.97:206,18,0	0/0:18,0:17:12.81:0,13,411	0/0:16,0:20:28.09:0,28,314	0/0:24,0:26:75.20:0,75,1319	0/0:4,0:18:44.82:0,45,346	0/0:6,0:13:32.92:0,33,296	1/1:5,27:32:78.16:925,78,0	0/0:8,0:25:61.08:0,61,480	0/0:32,0:33:78.19:0,78,1331	0/0:23,0:30:75.05:0,75,1164	0/0:2,0:15:26.91:0,27,210	0/0:2,0:20:49.08:0,49,374	0/0:23,0:26:66.17:0,66,1133	1/1:3,25:28:66.04:794,66,0	0/0:23,0:26:63.11:0,63,1052	0/0:18,0:22:45.13:0,45,804	0/0:13,0:17:45.08:0,45,682	1/1:2,11:14:26.95:294,27,0	1/1:4,18:22:41.73:480,42,0	1/1:5,25:30:60.08:734,60,0	0/0:4,0:15:35.87:0,36,278	0/0:4,0:22:50.34:0,50,410	0/0:7,0:21:46.14:0,46,425	0/0:16,0:18:45.07:0,45,699	0/0:26,0:26:60.17:0,60,1024	1/1:4,14:18:36.09:455,36,0	0/0:8,0:8:18.95:0,19,358
chr10	50651950	.	CTTTAATACT	C	16194.18	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=14.764;DP=532;FS=4.575;HRun=0;HaplotypeScore=163.6254;InbreedingCoeff=0.9804;MQ=70.47;MQ0=0;MQRankSum=-15.294;QD=53.45;ReadPosRankSum=1.365;VQSLOD=4.7453;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,13:15:33.11:903,33,0	1/1:3,8:11:20.94:605,21,0	0/0:18,0:18:30.10:0,30,1160	0/0:7,0:7:18.06:0,18,578	0/0:29,0:29:75.26:0,75,3028	1/1:1,15:16:27.09:781,27,0	1/1:5,13:18:33.11:926,33,0	1/1:12,18:30:54.19:1410,54,0	1/1:4,18:22:51.18:1447,51,0	0/0:32,0:32:78.26:0,78,3504	0/0:29,0:29:75.26:0,75,3099	1/1:5,12:17:30.10:866,30,0	1/1:6,16:22:36.12:1041,36,0	0/0:19,0:19:51.17:0,51,2168	1/1:4,15:19:42.14:1212,42,0	1/1:5,12:17:30.10:867,30,0	0/0:20,0:20:39.13:0,39,1785	0/0:17,0:17:39.13:0,39,1609	1/1:3,9:12:27.09:745,27,0	1/1:7,20:27:63.18:1643,63,0	1/1:4,5:9:15.05:372,15,0	1/1:4,11:15:33.11:914,33,0	1/1:10,15:25:35.94:1034,36,0	1/1:4,3:7:6.02:156,6,0	0/0:19,0:19:45.15:0,45,1900	0/0:25,0:25:54.18:0,54,2342	1/1:5,16:21:45.15:1273,45,0	0/0:14,0:14:36.12:0,36,1547
chr10	50652824	.	T	TG	12669.14	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=16.392;DP=761;FS=7.138;HRun=0;HaplotypeScore=97.4099;InbreedingCoeff=1.0000;MQ=80.05;MQ0=0;MQRankSum=-6.722;QD=42.80;ReadPosRankSum=3.184;VQSLOD=4.9920;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,111,1497	1/1:0,16:16:48.16:750,48,0	0/0:22,0:22:66.20:0,66,877	0/0:15,0:15:45.13:0,45,605	0/0:29,0:29:87.27:0,87,1184	1/1:1,31:32:87.23:1332,87,0	1/1:0,23:23:63.21:986,63,0	0/0:27,0:27:81.27:0,81,1119	1/1:0,20:20:60.20:938,60,0	0/0:27,0:27:81.26:0,81,1104	0/0:24,0:24:69.23:0,69,964	1/1:1,21:22:57.14:861,57,0	1/1:1,32:33:87.12:1328,87,0	0/0:34,0:34:99:0,102,1395	1/1:0,51:51:99:2111,135,0	1/1:0,34:34:96.33:1502,96,0	0/0:24,0:24:72.21:0,72,955	0/0:23,0:23:69.14:0,69,887	0/0:37,0:37:99:0,108,1492	0/0:24,0:24:72.21:0,72,986	0/0:41,0:41:99:0,120,1660	1/1:0,20:20:57.19:891,57,0	1/1:0,18:18:51.17:797,51,0	1/1:0,27:27:75.26:1173,75,0	0/0:20,0:20:57.18:0,57,781	0/0:29,0:29:87.28:0,87,1189	0/0:35,0:35:99:0,105,1426	0/0:17,0:17:51.17:0,51,713
chr10	50653727	.	T	TCTC	17062.84	PASS	AB=0.565;AC=33;AF=0.589;AN=56;BaseQRankSum=-3.728;DP=679;FS=1.509;HRun=0;HaplotypeScore=101.5136;InbreedingCoeff=0.9149;MQ=69.71;MQ0=0;MQRankSum=-1.872;QD=39.68;ReadPosRankSum=1.608;VQSLOD=5.7666;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:12,26:38:72.24:1446,72,0	0/1:3,9:13:6.98:468,0,7	0/0:27,0:26:45.09:0,45,581	0/0:17,0:16:18.06:0,18,255	0/0:33,0:33:84.28:0,84,1228	1/1:6,24:33:60.21:1230,60,0	1/1:11,16:27:4.24:871,4,0	1/1:18,17:36:54.07:901,54,0	1/1:3,19:22:54.19:1114,54,0	0/0:18,0:18:42.14:0,42,614	0/0:26,0:26:69.23:0,69,1010	1/1:5,21:26:60.21:1222,60,0	1/1:4,18:25:48.16:981,48,0	0/0:22,0:22:48.11:0,48,660	1/1:6,16:23:39.13:798,39,0	1/1:0,12:12:30.10:619,30,0	0/0:22,0:22:51.13:0,51,702	0/0:22,0:22:54.07:0,54,722	1/1:18,10:28:45.09:783,45,0	1/1:6,20:27:75.26:1503,75,0	1/1:2,16:18:39.13:805,39,0	1/1:8,21:30:63.22:1262,63,0	1/1:5,17:23:39.13:794,39,0	1/1:4,17:20:45.15:920,45,0	0/0:20,0:20:54.14:0,54,733	0/0:29,0:29:75.25:0,75,1098	1/1:3,24:27:66.23:1348,66,0	0/0:13,0:13:15.05:0,15,220
chr10	50653916	.	A	AGT	1534.29	PASS	AB=0.938;AC=34;AF=0.654;AN=52;BaseQRankSum=4.774;DP=731;FS=2.437;HRun=0;HaplotypeScore=152.6779;InbreedingCoeff=0.3211;MQ=60.19;MQ0=8;MQRankSum=-1.641;QD=2.94;ReadPosRankSum=-2.091;VQSLOD=2.6742;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:41,0:42:41.61:409,42,0	1/1:6,0:10:3:26,3,0	./.	./.	0/1:14,2:16:71.80:72,0,95	1/1:29,0:32:3:26,3,0	1/1:25,0:25:9.70:116,10,0	0/1:24,0:24:20.94:70,0,21	1/1:26,0:32:8.96:74,9,0	0/0:17,0:17:12.91:0,13,134	0/0:17,0:17:12.02:0,12,123	1/1:19,0:22:3:26,3,0	1/1:30,0:31:12.42:108,12,0	0/0:26,0:27:21.32:0,21,192	1/1:17,0:38:12:105,12,0	1/1:17,0:21:5.96:52,6,0	0/1:27,0:29:13.68:14,0,226	0/0:19,0:19:14.12:0,14,150	1/1:16,1:17:6.41:63,6,0	0/1:13,0:13:26.82:38,0,27	1/1:33,10:45:5.11:87,5,0	1/1:21,0:20:9:77,9,0	1/1:22,0:21:8.99:89,9,0	1/1:33,0:32:9.01:94,9,0	0/0:29,0:29:35.66:0,36,368	0/1:23,0:26:25.51:26,0,120	0/1:12,4:19:77.47:139,0,77	0/0:25,0:26:29.72:0,30,281
chr10	50654354	.	TTCC	T	3146.86	PASS	AB=0.963;AC=19;AF=0.339;AN=56;BaseQRankSum=13.920;DP=672;FS=16.045;HRun=0;HaplotypeScore=148.4169;InbreedingCoeff=0.2502;MQ=45.12;MQ0=57;MQRankSum=-7.108;QD=9.26;ReadPosRankSum=6.452;VQSLOD=1.4836;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:21,0:18:10.40:89,0,10	0/0:4,0:4:2.99:0,3,10	0/0:22,0:5:12.84:0,13,73	0/0:31,0:4:5.92:0,6,34	0/0:17,0:15:30.27:0,30,267	0/1:20,2:17:47.46:47,0,247	0/1:27,1:21:42.89:43,0,84	0/0:24,0:18:37.41:0,37,203	0/1:23,1:21:46.83:47,0,354	0/0:26,0:21:54.34:0,54,636	0/0:13,0:13:24.07:0,24,221	1/1:18,8:25:60.74:673,61,0	1/1:16,12:23:62.24:647,62,0	0/0:37,0:35:88.16:0,88,1189	0/1:28,0:26:55.40:147,0,55	0/1:16,3:19:97.67:98,0,219	0/0:36,0:32:80.33:0,80,1112	0/0:37,0:31:68.33:0,68,1200	0/1:24,0:15:38.46:38,0,158	0/1:12,0:12:51.20:79,0,51	0/0:18,0:9:9.49:0,9,108	1/1:13,3:7:17.44:125,17,0	1/1:17,3:16:30.54:354,31,0	1/1:26,6:27:45.46:610,45,0	0/0:23,0:23:39.49:0,39,331	0/0:32,0:25:54.97:0,55,450	0/1:39,0:38:99:337,0,213	0/0:12,0:9:27.08:0,27,399
chr10	50654387	.	TCCTTCC	T	4230.58	PASS	AB=0.996;AC=20;AF=0.357;AN=56;BaseQRankSum=12.231;DP=673;FS=39.730;HRun=0;HaplotypeScore=189.8898;InbreedingCoeff=0.2143;MQ=39.50;MQ0=51;MQRankSum=-9.777;QD=11.69;ReadPosRankSum=5.310;VQSLOD=2.1438;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:18,0:16:53.49:53,0,92	0/0:9,0:9:13.23:0,13,136	0/0:21,0:3:9.03:0,9,151	0/0:31,0:6:15.01:0,15,209	0/0:11,0:10:15.05:0,15,213	0/1:24,0:19:24.16:158,0,24	0/1:26,1:21:8.61:256,0,9	0/1:23,0:14:15.04:15,0,367	1/1:23,0:20:9.86:207,10,0	0/0:32,0:21:54.18:0,54,1024	0/0:8,0:7:18.06:0,18,255	1/1:25,1:25:23.32:525,23,0	1/1:20,2:22:33.86:633,34,0	0/0:29,0:26:66.23:0,66,1679	0/0:29,0:26:41.08:0,41,481	0/1:24,0:23:9.03:423,0,9	0/0:37,0:32:75.24:0,75,1551	0/0:36,0:29:76.98:0,77,1735	0/1:24,0:17:99:170,0,319	0/1:22,0:20:52.45:187,0,52	0/1:21,0:13:34.59:54,0,35	1/1:14,1:8:10.02:117,10,0	1/1:13,1:10:29.41:296,29,0	0/1:35,0:30:77.59:449,0,78	0/0:19,0:18:45.14:0,45,716	0/0:34,0:27:66.82:0,67,1073	0/1:44,0:40:78.70:686,0,79	0/0:15,0:13:36.11:0,36,716
chr10	50654402	.	CTCTTCT	C	8307.91	PASS	AB=0.911;AC=26;AF=0.464;AN=56;BaseQRankSum=11.150;DP=609;FS=30.641;HRun=0;HaplotypeScore=184.9220;InbreedingCoeff=0.4866;MQ=42.30;MQ0=16;MQRankSum=-6.418;QD=23.01;ReadPosRankSum=3.201;VQSLOD=3.0404;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:18,3:20:7.99:460,8,0	0/1:9,1:10:40.59:213,0,41	0/0:15,0:2:3.01:0,3,76	0/0:22,0:5:12.04:0,12,200	0/0:12,0:12:30.10:0,30,640	1/1:14,2:16:35.95:528,36,0	1/1:20,0:18:31.40:515,31,0	0/0:25,0:15:2.67:0,3,375	1/1:16,1:17:37.78:553,38,0	0/0:24,0:23:69.21:0,69,1445	0/0:7,0:7:21.07:0,21,461	1/1:19,8:27:75.18:1096,75,0	1/1:17,6:23:57.11:908,57,0	0/0:22,0:22:60.21:0,60,1508	0/1:25,1:26:99:225,0,366	1/1:25,3:28:58.74:841,59,0	0/0:37,0:33:90.30:0,90,2073	0/0:29,0:26:64.05:0,64,1494	0/1:22,2:21:99:160,0,357	0/1:24,3:26:99:256,0,217	0/1:20,0:16:39.63:40,0,122	1/1:10,1:10:18.64:264,19,0	1/1:8,3:11:25.99:413,26,0	1/1:26,4:30:4.63:884,5,0	0/0:16,0:16:42.14:0,42,940	0/0:27,0:24:65.43:0,65,1438	0/1:35,15:46:99:952,0,264	0/0:12,0:11:30.10:0,30,699
chr10	50654408	.	T	TTCC	9912.07	PASS	AB=0.948;AC=28;AF=0.500;AN=56;BaseQRankSum=8.790;DP=629;FS=25.841;HRun=0;HaplotypeScore=154.4521;InbreedingCoeff=0.5546;MQ=44.20;MQ0=16;MQRankSum=-5.847;QD=24.41;ReadPosRankSum=4.315;VQSLOD=2.8440;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:15,7:21:38.62:503,39,0	1/1:6,7:12:33.03:463,33,0	0/0:13,0:2:6.01:0,6,73	0/0:22,0:6:14.82:0,15,153	0/0:13,0:13:36.10:0,36,531	1/1:4,13:18:33.11:725,33,0	1/1:4,17:20:33.11:726,33,0	0/1:25,0:15:70.06:70,0,199	1/1:3,13:17:39.08:811,39,0	0/0:22,0:21:60.20:0,60,936	0/0:8,0:8:24.07:0,24,361	1/1:16,11:27:64.56:1220,65,0	1/1:13,12:25:41.92:797,42,0	0/0:24,0:24:66.13:0,66,894	0/1:13,10:24:16.98:709,0,17	1/1:9,18:29:54.10:1093,54,0	0/0:40,0:37:96.27:0,96,1412	0/0:28,0:24:62.83:0,63,903	0/1:28,0:25:99:234,0,242	0/1:28,0:27:99:129,0,177	0/1:18,0:15:30.57:31,0,66	1/1:2,10:13:18.01:307,18,0	1/1:4,10:15:23.57:408,24,0	1/1:8,24:33:38.12:1041,38,0	0/0:15,0:15:42.10:0,42,640	0/0:25,0:23:63.21:0,63,985	0/1:50,0:47:24.31:648,0,24	0/0:12,0:11:30.09:0,30,441
chr10	50654432	.	CTCT	C	3757.42	PASS	AB=0.661;AC=11;AF=0.196;AN=56;BaseQRankSum=7.294;DP=677;FS=7.384;HRun=0;HaplotypeScore=166.5533;InbreedingCoeff=0.4880;MQ=50.49;MQ0=11;MQRankSum=-6.535;QD=19.37;ReadPosRankSum=1.067;VQSLOD=2.8636;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,12:21:31.07:563,31,0	1/1:1,11:11:30.05:349,30,0	0/0:24,0:13:23.45:0,23,452	0/0:19,0:12:31.63:0,32,500	0/0:15,0:15:45.14:0,45,992	0/0:21,0:20:42.13:0,42,844	0/0:27,0:27:63.04:0,63,1143	0/1:13,6:14:99:178,0,210	0/0:20,0:20:50.60:0,51,966	0/0:28,0:28:84.26:0,84,1757	0/0:11,0:11:33.10:0,33,672	0/0:29,0:29:72.79:0,73,1480	0/0:29,0:27:61.53:0,62,1082	0/0:24,0:24:69.10:0,69,1303	0/1:8,12:20:34.05:426,0,34	0/0:34,0:34:86.90:0,87,1666	0/0:47,0:44:99:0,102,2452	0/0:22,0:19:54.15:0,54,1076	0/1:13,9:21:99:260,0,198	1/1:9,20:29:17.45:779,17,0	0/1:6,17:21:2.03:287,0,2	0/0:17,0:17:40.11:0,40,792	0/0:19,0:19:30.39:0,30,489	0/0:34,0:33:60.60:0,61,971	0/0:16,0:16:48.16:0,48,1105	0/0:35,0:33:90.26:0,90,1813	0/1:19,28:44:31.10:915,0,31	0/0:10,0:10:30.09:0,30,591
chr10	50657969	.	TG	T	6962.80	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=8.965;DP=683;FS=32.898;HRun=7;HaplotypeScore=77.8656;InbreedingCoeff=0.9951;MQ=85.37;MQ0=0;MQRankSum=-2.596;QD=25.32;ReadPosRankSum=4.411;VQSLOD=3.0006;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:38:83.10:0,83,455	1/1:2,12:14:30.07:306,30,0	0/0:19,0:19:48.15:0,48,592	0/0:24,0:24:56.95:0,57,665	0/0:20,0:20:45.08:0,45,523	1/1:7,20:27:63.13:642,63,0	1/1:3,28:31:72.16:735,72,0	0/0:39,0:39:99:0,105,1289	1/1:3,19:22:54.05:538,54,0	0/0:21,0:21:54.13:0,54,626	0/0:19,0:19:51.05:0,51,575	1/1:1,31:32:84.19:856,84,0	1/1:3,24:27:66.15:673,66,0	0/0:18,0:18:51.16:0,51,642	1/1:2,38:40:99:1132,111,0	0/0:22,0:22:60.19:0,60,755	0/0:36,0:36:99:0,102,1255	0/0:25,0:25:66.21:0,66,827	0/0:22,0:22:54.13:0,54,660	0/0:21,0:21:45.12:0,45,541	0/0:32,0:32:75.18:0,75,900	1/1:2,13:15:39.09:397,39,0	1/1:2,24:26:63.14:643,63,0	1/1:5,36:41:99:1041,102,0	0/0:10,0:10:27.06:0,27,304	0/0:12,0:12:30.10:0,30,377	0/0:25,0:24:60.19:0,60,755	0/0:5,0:5:12.04:0,12,151
chr10	50658046	.	TACAC	T	7101.32	PASS	AB=0.878;AC=19;AF=0.339;AN=56;BaseQRankSum=-2.431;DP=780;FS=12.242;HRun=0;HaplotypeScore=172.9461;InbreedingCoeff=0.7244;MQ=60.96;MQ0=19;MQRankSum=-0.839;QD=22.26;ReadPosRankSum=-0.147;VQSLOD=3.8787;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:46:99:0,109,1612	0/0:13,0:13:20.98:0,21,179	0/0:35,0:10:8.73:0,9,108	0/0:46,0:15:7.56:0,8,161	0/0:23,0:25:68.66:0,69,1421	1/1:15,20:35:78.15:1206,78,0	1/1:6,28:36:63.21:1022,63,0	1/1:10,15:25:44.15:615,44,0	1/1:7,14:22:54.16:849,54,0	0/0:27,0:30:86.86:0,87,1857	0/0:24,0:24:60.17:0,60,1337	0/1:38,0:35:10.41:10,0,534	0/0:42,0:41:3.20:0,3,791	0/0:27,0:28:65.91:0,66,1476	0/1:35,0:35:24.64:25,0,445	1/1:9,15:24:57.18:929,57,0	0/0:27,0:27:66.23:0,66,1558	0/0:16,0:16:33.03:0,33,607	0/1:8,11:19:15.57:436,0,16	1/1:2,24:27:39.60:658,40,0	1/1:8,33:41:43.21:897,43,0	0/0:24,0:23:20.22:0,20,356	0/0:25,0:25:25.41:0,25,386	0/0:32,0:32:62.75:0,63,526	0/0:22,0:22:66.20:0,66,1461	0/0:18,0:18:42.14:0,42,975	1/1:1,16:17:27.09:454,27,0	0/0:7,0:7:21.07:0,21,522
chr10	50658063	.	ACACG	A	4643.03	PASS	AB=0.994;AC=22;AF=0.393;AN=56;BaseQRankSum=3.587;DP=803;FS=9.481;HRun=0;HaplotypeScore=179.8080;InbreedingCoeff=0.1542;MQ=57.85;MQ0=21;MQRankSum=-0.029;QD=9.29;ReadPosRankSum=-0.823;VQSLOD=3.1132;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,109,1762	0/1:12,0:12:1.93:16,0,2	0/1:41,0:10:5.95:6,0,189	0/0:49,0:11:10.91:0,11,166	0/0:28,0:28:75.04:0,75,1535	1/1:31,0:31:27.55:580,28,0	0/1:38,0:38:75.96:505,0,76	0/1:24,0:24:41.61:313,0,42	0/1:24,0:24:48.25:397,0,48	0/0:36,0:36:99:0,105,2264	0/0:22,0:22:57.19:0,57,1436	1/1:38,2:37:17.43:326,17,0	0/1:39,3:41:48.36:208,0,48	0/0:27,0:27:78.19:0,78,1719	1/1:32,2:34:21.63:316,22,0	0/1:24,0:24:28.12:436,0,28	0/0:29,0:29:84.15:0,84,1860	0/0:12,0:12:27.01:0,27,564	0/1:19,0:19:99:190,0,140	0/1:29,0:29:31.43:327,0,31	0/1:44,0:44:97.84:439,0,98	1/1:28,0:27:11.51:183,12,0	1/1:20,1:21:4.15:105,4,0	0/1:28,0:28:0.27:61,0,0	0/0:26,0:26:66.16:0,66,1580	0/0:19,0:19:54.06:0,54,1116	0/1:21,0:21:61.89:234,0,62	0/0:8,0:8:24.04:0,24,584
chr10	50658065	.	ACG	A	7403.57	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=-1.048;DP=808;FS=2.142;HRun=0;HaplotypeScore=145.1125;InbreedingCoeff=0.7209;MQ=58.46;MQ0=20;MQRankSum=1.283;QD=23.06;ReadPosRankSum=0.209;VQSLOD=5.1460;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:49,0:49:73.74:74,0,916	1/1:6,6:12:21.05:298,21,0	0/1:39,0:10:12.36:12,0,137	0/0:49,0:11:2.25:0,2,109	0/0:27,0:27:51.79:0,52,1037	0/0:29,0:29:58.70:0,59,263	0/0:38,1:39:38.15:0,38,295	0/1:25,0:25:78.01:78,0,107	0/0:25,0:25:48.76:0,49,249	0/0:36,0:36:91.35:0,91,1604	0/0:21,0:21:57.17:0,57,1007	1/1:16,24:37:99:1353,103,0	1/1:12,30:41:96.33:1577,96,0	0/0:28,0:28:63.76:0,64,1209	1/1:19,17:36:99:1243,99,0	0/0:26,0:26:60.88:0,61,296	0/0:29,0:29:84.05:0,84,1342	0/0:11,0:11:22.82:0,23,385	0/0:19,0:19:33.83:0,34,270	0/0:29,0:29:35.87:0,36,164	0/0:46,0:46:65.14:0,65,332	1/1:16,13:28:75.13:938,75,0	1/1:11,10:21:57.13:796,57,0	1/1:10,18:28:75.18:1035,75,0	0/0:25,0:25:66.16:0,66,1136	0/0:18,0:18:53.73:0,54,815	0/0:21,0:21:25.85:0,26,144	0/0:8,0:8:24.04:0,24,420
chr10	50658271	.	C	CA	3975.28	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-6.017;DP=799;FS=4.909;HRun=2;HaplotypeScore=80.1098;InbreedingCoeff=0.9977;MQ=82.62;MQ0=0;MQRankSum=-2.643;QD=38.59;ReadPosRankSum=-0.256;VQSLOD=3.9955;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,144,1771	0/0:14,0:14:42.12:0,42,508	0/0:21,0:21:55.16:0,55,688	0/0:23,0:23:45.46:0,45,683	0/0:26,0:26:78.22:0,78,947	1/1:1,25:25:75.25:1080,75,0	1/1:1,22:23:60.20:864,60,0	0/0:24,0:24:63.19:0,63,771	1/1:0,19:19:57.19:821,57,0	0/0:35,0:35:99:0,102,1246	0/0:28,0:28:81.24:0,81,993	0/0:31,0:31:93.29:0,93,1153	0/0:46,0:46:99:0,135,1632	0/0:45,0:45:99:0,135,1659	0/0:42,0:42:99:0,123,1511	1/1:2,33:35:84.28:1210,84,0	0/0:20,0:20:57.18:0,57,706	0/0:29,0:29:87.27:0,87,1079	0/0:28,0:28:81.25:0,81,1004	0/0:23,0:23:63.20:0,63,781	0/0:41,0:41:99:0,114,1399	0/0:17,0:17:51.11:0,51,589	0/0:26,0:26:75.22:0,75,917	0/0:37,0:37:99:0,111,1343	0/0:30,0:30:87.27:0,87,1079	0/0:23,0:23:66.21:0,66,818	0/0:30,0:30:90.28:0,90,1115	0/0:6,0:6:18.06:0,18,223
chr10	50661266	.	TATGCTATATCTATATGCATATCTA	T	22810.14	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=15.610;DP=528;FS=12.554;HRun=0;HaplotypeScore=294.6946;InbreedingCoeff=0.9694;MQ=78.20;MQ0=0;MQRankSum=-13.559;QD=91.61;ReadPosRankSum=3.986;VQSLOD=2.9519;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,29:29:12.04:747,12,0	0/0:5,0:5:15.05:0,15,1585	0/0:14,0:14:38.31:0,38,1227	0/0:20,0:20:47.64:0,48,1751	0/0:36,0:36:99:0,108,9906	1/1:0,13:13:15.05:987,15,0	1/1:0,19:19:15.05:1002,15,0	1/1:0,18:18:54.16:1378,54,0	1/1:1,8:9:18.06:1215,18,0	0/0:32,0:32:96.33:0,96,8974	0/0:22,0:22:66.23:0,66,6566	1/1:1,21:22:36.12:2411,36,0	1/1:0,23:23:51.18:3443,51,0	0/0:28,0:28:78.25:0,78,7403	0/0:31,0:31:93.31:0,93,9495	1/1:0,22:22:54.19:3633,54,0	0/0:19,0:19:57.20:0,57,5337	0/0:14,0:14:42.14:0,42,4004	1/1:0,6:6:18.06:589,18,0	1/1:0,13:13:21.04:1191,21,0	1/1:0,19:19:9.03:601,9,0	1/1:0,19:19:21.03:1208,21,0	1/1:0,10:11:15.05:896,15,0	1/1:0,10:10:15.05:876,15,0	0/0:23,0:23:69.24:0,69,6210	0/0:30,0:30:90.31:0,90,9126	1/1:0,16:16:39.13:2634,39,0	0/0:4,0:4:12.04:0,12,951
chr10	50661290	.	A	AGAT	6433.67	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=15.507;DP=654;FS=34.075;HRun=0;HaplotypeScore=239.8735;InbreedingCoeff=0.9919;MQ=68.94;MQ0=1;MQRankSum=-17.065;QD=17.72;ReadPosRankSum=3.693;VQSLOD=2.7705;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:35,1:36:26.11:512,26,0	0/0:7,0:7:21.07:0,21,391	0/0:14,0:13:39.13:0,39,704	0/0:18,0:18:35.69:0,36,544	0/0:32,0:32:93.29:0,93,1652	1/1:18,1:19:18.18:309,18,0	1/1:26,0:26:19.84:316,20,0	1/1:34,0:34:42.01:963,42,0	1/1:14,1:15:26.61:407,27,0	0/0:32,0:32:96.29:0,96,1723	0/0:24,0:24:72.23:0,72,1310	1/1:31,2:32:36.63:661,37,0	1/1:29,0:29:44.10:411,44,0	0/0:28,0:28:78.27:0,78,1428	0/0:38,0:38:99:0,108,2013	1/1:30,0:30:53.24:561,53,0	0/0:21,0:21:63.22:0,63,1174	0/0:15,0:15:45.15:0,45,839	1/1:15,0:15:23.29:464,23,0	1/1:18,1:19:21.85:394,22,0	1/1:28,1:29:20.92:337,21,0	1/1:24,0:24:20.83:271,21,0	1/1:16,0:16:21.03:446,21,0	1/1:18,0:18:15.85:242,16,0	0/0:20,0:20:60.21:0,60,1111	0/0:34,0:34:99:0,99,1830	1/1:20,0:19:19.81:139,20,0	0/0:8,0:8:24.08:0,24,422
chr10	50661731	.	TCCTC	T	3886.53	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=10.986;DP=691;FS=23.068;HRun=0;HaplotypeScore=111.1468;InbreedingCoeff=0.9980;MQ=60.45;MQ0=4;MQRankSum=0.720;QD=26.80;ReadPosRankSum=-1.440;VQSLOD=1.1415;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:78.25:0,78,1451	0/0:10,0:10:21.06:0,21,478	0/0:26,0:18:25.74:0,26,396	0/0:36,0:16:33.82:0,34,628	0/0:13,0:13:27.09:0,27,658	0/0:16,0:16:36.11:0,36,855	0/0:28,0:28:72.24:0,72,1667	1/1:9,17:26:41.86:613,42,0	0/0:29,0:29:75.20:0,75,1669	0/0:19,0:19:57.16:0,57,1341	0/0:14,0:14:30.10:0,30,711	0/0:36,0:35:74.29:0,74,1894	0/0:36,0:36:96.21:0,96,2090	0/0:22,0:22:57.18:0,57,1392	0/0:37,0:37:99:0,102,2448	0/0:36,0:36:93.28:0,93,2245	0/0:26,0:26:63.17:0,63,1399	0/0:21,0:21:57.20:0,57,1423	1/1:7,22:27:62.96:847,63,0	1/1:3,19:22:47.87:635,48,0	1/1:7,22:29:42.03:661,42,0	0/0:20,0:20:45.15:0,45,1071	0/0:24,0:24:62.43:0,62,1487	0/0:19,0:18:48.12:0,48,1160	0/0:15,0:15:36.03:0,36,688	0/0:25,0:25:72.20:0,72,1574	1/1:3,36:39:65.46:1130,65,0	0/0:9,0:9:27.05:0,27,514
chr10	50662467	.	T	TA	7871.22	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-12.360;DP=442;FS=19.060;HRun=8;HaplotypeScore=39.0856;InbreedingCoeff=0.9751;MQ=74.19;MQ0=0;MQRankSum=1.996;QD=27.43;ReadPosRankSum=1.341;VQSLOD=3.1843;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,19:22:50.98:568,51,0	1/1:0,7:7:18.05:208,18,0	0/0:12,0:10:17.36:0,17,141	0/0:9,0:9:17.96:0,18,153	0/0:15,0:15:11.47:0,11,273	1/1:2,23:26:63.19:726,63,0	1/1:3,14:17:42.12:485,42,0	1/1:2,23:26:68.96:714,69,0	1/1:1,19:20:48.14:545,48,0	0/0:14,0:14:42.02:0,42,384	0/0:14,0:14:40.58:0,41,361	1/1:1,18:19:48.14:554,48,0	1/1:1,15:16:33.10:381,33,0	0/0:7,0:7:21.01:0,21,192	1/1:0,17:17:48.14:554,48,0	1/1:3,12:16:35.94:395,36,0	0/0:18,0:18:51.01:0,51,462	0/0:20,0:20:57.02:0,57,521	1/1:4,14:18:22.85:431,23,0	1/1:1,9:10:27.08:311,27,0	1/1:1,13:14:33.10:381,33,0	1/1:1,4:5:9.03:104,9,0	1/1:1,7:8:15.04:173,15,0	1/1:0,16:16:45.13:519,45,0	0/0:6,0:6:12:0,12,109	0/0:23,0:23:57.03:0,57,522	1/1:5,25:30:65.24:821,65,0	0/0:17,0:17:45.02:0,45,412
chr10	50663026	.	A	AT	9638.22	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-16.909;DP=567;FS=6.512;HRun=2;HaplotypeScore=48.6024;InbreedingCoeff=0.9946;MQ=70.59;MQ0=0;MQRankSum=1.976;QD=38.86;ReadPosRankSum=0.152;VQSLOD=5.0326;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,43:45:99:1641,114,0	0/0:10,0:10:30.09:0,30,372	0/0:5,0:5:14.88:0,15,157	0/0:9,0:9:14.97:0,15,155	0/0:17,0:16:45.14:0,45,558	0/0:23,0:23:66.19:0,66,796	0/0:25,0:25:72.23:0,72,892	1/1:0,25:25:72.12:956,72,0	0/0:26,0:26:78.24:0,78,956	0/0:19,0:19:51.11:0,51,593	0/0:13,0:13:39.12:0,39,483	1/1:1,25:26:72.24:1037,72,0	1/1:1,15:16:36.12:518,36,0	0/0:27,0:27:81.21:0,81,966	0/0:28,0:28:75.21:0,75,915	0/0:24,0:24:69.19:0,69,829	0/0:21,0:21:60.19:0,60,743	0/0:31,0:31:87.20:0,87,1035	1/1:1,14:15:42.13:586,42,0	1/1:0,15:15:42.11:582,42,0	1/1:0,31:31:87.29:1252,87,0	1/1:1,11:12:33.11:475,33,0	1/1:1,14:15:39.13:561,39,0	1/1:0,24:24:69.23:993,69,0	0/0:21,0:21:57.16:0,57,692	0/0:13,0:13:39.12:0,39,483	1/1:0,24:24:72.24:1036,72,0	0/0:7,0:7:21.07:0,21,260
chr10	50663797	.	TTTTTTG	T	279.13	PASS	AB=0.686;AC=1;AF=0.018;AN=56;BaseQRankSum=4.641;DP=575;FS=15.366;HRun=0;HaplotypeScore=139.6601;InbreedingCoeff=0.1448;MQ=70.24;MQ0=5;MQRankSum=-3.299;QD=11.63;ReadPosRankSum=-1.434;VQSLOD=1.6518;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:13,11:23:9.72:354,0,10	0/0:13,0:13:26.99:0,27,855	0/0:28,0:17:13.60:0,14,254	0/0:19,0:10:14.62:0,15,107	0/0:31,0:31:90.30:0,90,2686	0/0:29,0:29:78.25:0,78,2345	0/0:17,0:17:42.09:0,42,1116	0/0:31,0:31:48.20:0,48,999	0/0:13,0:13:39.13:0,39,1108	0/0:26,0:26:69.17:0,69,1950	0/0:24,0:24:69.22:0,69,2020	0/0:24,0:24:59.92:0,60,860	0/0:22,0:22:60.81:0,61,914	0/0:14,0:14:39.10:0,39,1023	0/0:16,0:16:39.09:0,39,1090	0/0:23,0:23:66.23:0,66,2010	0/0:19,0:19:49.40:0,49,1350	0/0:17,0:17:48.15:0,48,1280	0/0:18,0:18:33.08:0,33,667	0/0:25,0:25:55.57:0,56,1427	0/0:10,0:10:21.07:0,21,458	0/0:13,0:13:36.11:0,36,547	0/0:22,0:22:42.37:0,42,753	0/0:12,0:13:31.04:0,31,483	0/0:19,0:19:51.14:0,51,1325	0/0:26,0:26:72.23:0,72,2010	0/0:22,0:22:32.70:0,33,825	0/0:17,0:17:39.01:0,39,1063
chr10	50663803	.	G	GT	4762.22	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=1.423;DP=568;FS=5.456;HRun=10;HaplotypeScore=70.2169;InbreedingCoeff=0.9475;MQ=67.27;MQ0=5;MQRankSum=3.204;QD=22.25;ReadPosRankSum=0.197;VQSLOD=5.7240;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:22:23.98:0,24,188	0/0:13,0:13:30.04:0,30,289	0/0:28,0:18:26.43:0,26,228	0/1:18,0:8:3.01:3,0,45	0/0:31,0:31:93.14:0,93,892	0/0:26,0:26:74.34:0,74,702	0/0:15,0:15:36.05:0,36,347	1/1:7,19:26:60.15:700,60,0	0/0:13,0:13:33.04:0,33,319	0/0:26,0:26:75.01:0,75,689	0/0:24,0:24:69.10:0,69,661	1/1:21,0:21:62.65:554,63,0	1/1:24,0:24:35.97:463,36,0	0/0:15,0:15:41.95:0,42,386	0/0:14,0:14:39.06:0,39,376	0/0:24,0:24:66.09:0,66,632	0/0:21,0:21:48.06:0,48,463	0/0:18,0:18:48.07:0,48,462	1/1:9,8:17:36.57:417,37,0	1/1:2,25:27:75.15:869,75,0	1/1:0,11:11:21.06:254,21,0	1/1:13,0:13:38.96:338,39,0	1/1:23,0:23:59.83:502,60,0	1/1:12,0:12:29.95:251,30,0	0/0:19,0:19:44.94:0,45,434	0/0:27,0:27:75.12:0,75,724	1/1:3,19:22:35.94:413,36,0	0/0:16,0:16:41.90:0,42,380
chr10	50665197	.	GA	G	2493.12	PASS	AB=0.941;AC=15;AF=0.268;AN=56;BaseQRankSum=10.617;DP=632;FS=5.467;HRun=10;HaplotypeScore=63.5544;InbreedingCoeff=0.9220;MQ=70.49;MQ0=0;MQRankSum=1.942;QD=17.43;ReadPosRankSum=3.633;VQSLOD=4.4970;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,16:16:41.99:365,42,0	1/1:1,8:9:21:182,21,0	0/1:15,1:16:6.59:7,0,199	0/0:16,1:15:29.55:0,30,297	0/0:36,0:36:94.48:0,94,1022	1/1:1,21:22:56.99:495,57,0	1/1:3,11:14:21.61:272,22,0	0/0:33,0:33:81.52:0,82,878	1/1:1,15:16:35.99:313,36,0	0/0:32,0:35:92.90:0,93,979	0/0:17,0:17:37.33:0,37,393	0/0:20,0:20:48.13:0,48,531	0/0:24,0:24:66.18:0,66,730	0/0:26,0:27:72.01:0,72,763	1/1:7,20:27:62.97:545,63,0	1/1:1,22:23:32.81:514,33,0	0/0:21,0:21:54.04:0,54,580	0/0:17,0:17:45.56:0,46,479	0/0:23,0:27:79.34:0,79,784	0/0:18,1:18:19.07:0,19,439	0/0:19,0:19:54.15:0,54,597	0/0:28,1:29:46.08:0,46,710	0/0:18,0:19:50.97:0,51,545	0/0:16,0:16:48.13:0,48,531	0/0:29,0:29:84.21:0,84,919	0/0:34,0:34:84.69:0,85,922	0/0:34,0:34:93.20:0,93,994	0/0:16,0:16:48.13:0,48,531
chr10	50665701	.	T	TA	2713.77	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=-2.595;DP=601;FS=1.970;HRun=8;HaplotypeScore=68.9835;InbreedingCoeff=0.8874;MQ=66.27;MQ0=0;MQRankSum=-0.326;QD=25.85;ReadPosRankSum=0.560;VQSLOD=4.4290;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,120,1098	0/0:9,0:10:26.04:0,26,225	0/1:6,0:4:18.06:18,0,36	0/0:9,0:9:27:0,27,240	0/0:31,0:31:93.03:0,93,844	0/0:23,0:23:56.98:0,57,511	0/0:11,0:12:29.03:0,29,248	0/0:38,0:38:99:0,108,974	0/0:19,0:19:48.02:0,48,439	0/0:33,0:33:87.03:0,87,794	0/0:25,0:25:75.04:0,75,686	1/1:3,13:16:42.12:485,42,0	1/1:7,21:28:72.21:827,72,0	0/0:19,0:19:51.03:0,51,467	0/0:24,0:24:69.04:0,69,631	0/0:19,0:19:57.01:0,57,513	0/0:21,0:21:54:0,54,488	0/0:15,0:15:45.02:0,45,411	0/0:18,0:18:39.01:0,39,356	0/0:25,0:25:66.03:0,66,604	0/0:10,0:10:27.01:0,27,247	1/1:4,9:13:27.08:312,27,0	1/1:5,21:26:41.74:733,42,0	1/1:5,11:16:48.07:519,48,0	0/0:31,0:31:81.04:0,81,740	0/0:22,0:22:54.02:0,54,493	0/0:33,0:32:90.05:0,90,824	0/0:13,0:13:39.02:0,39,357
chr10	50665768	.	TG	T	10422.77	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=12.195;DP=634;FS=3.494;HRun=5;HaplotypeScore=70.3402;InbreedingCoeff=0.9999;MQ=83.18;MQ0=0;MQRankSum=-2.678;QD=29.86;ReadPosRankSum=2.405;VQSLOD=5.5868;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,44:48:99:1395,123,0	0/0:12,0:12:36.10:0,36,475	0/0:17,0:17:42.07:0,42,534	0/0:23,0:23:51.11:0,51,646	0/0:32,0:32:90.30:0,90,1231	1/1:1,18:19:54.15:612,54,0	1/1:0,23:23:66.19:749,66,0	1/1:1,24:25:72.17:797,72,0	1/1:0,20:20:60.17:681,60,0	0/0:29,0:29:81.27:0,81,1106	0/0:22,0:22:63.17:0,63,812	1/1:1,18:19:48.14:545,48,0	1/1:1,25:26:54.14:604,54,0	0/0:30,0:30:87.28:0,87,1175	0/0:30,0:30:84.27:0,84,1134	1/1:2,15:17:45.13:511,45,0	0/0:25,0:25:72.24:0,72,985	0/0:12,0:12:33.11:0,33,451	1/1:3,17:20:51.13:569,51,0	1/1:0,27:27:75.21:851,75,0	1/1:2,28:30:87.23:977,87,0	1/1:1,15:16:45.11:500,45,0	1/1:4,22:26:51.14:578,51,0	1/1:0,13:13:36.10:408,36,0	0/0:20,0:20:57.19:0,57,780	0/0:21,0:21:63.19:0,63,829	1/1:1,19:20:57.16:647,57,0	0/0:12,0:12:36.12:0,36,492
chr10	50666386	.	T	TA	21268.31	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-16.188;DP=891;FS=2.380;HRun=3;HaplotypeScore=79.9161;InbreedingCoeff=1.0000;MQ=86.39;MQ0=0;MQRankSum=-4.286;QD=41.22;ReadPosRankSum=1.507;VQSLOD=4.3940;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,48:48:99:1933,129,0	0/0:23,0:23:63.19:0,63,801	0/0:31,0:31:87.27:0,87,1095	0/0:26,0:26:66.08:0,66,933	0/0:30,0:30:87.28:0,87,1128	1/1:0,42:42:99:1834,123,0	1/1:0,27:27:81.27:1214,81,0	1/1:0,33:33:99:1462,99,0	1/1:0,31:31:87.29:1304,87,0	0/0:37,0:37:99:0,108,1388	0/0:28,0:28:84.26:0,84,1077	1/1:0,32:32:75.25:1124,75,0	1/1:1,37:38:99:1574,105,0	0/0:29,0:29:84.26:0,84,1074	0/0:48,0:48:99:0,141,1830	1/1:3,33:36:96.33:1439,96,0	0/0:32,0:32:96.31:0,96,1245	0/0:13,0:13:36.12:0,36,467	1/1:1,17:18:54.18:797,54,0	1/1:0,44:44:99:1909,129,0	1/1:1,36:37:93.32:1394,93,0	1/1:2,29:31:87.29:1304,87,0	1/1:2,29:31:81.22:1214,81,0	1/1:0,28:28:78.26:1169,78,0	0/0:24,0:24:72.22:0,72,918	0/0:39,1:40:72.38:0,72,1419	1/1:1,39:38:99:1597,108,0	0/0:14,0:14:42.14:0,42,545
chr10	50666841	.	TTG	T	211.90	PASS	AB=0.970;AC=18;AF=0.360;AN=50;BaseQRankSum=3.710;DP=625;FS=12.947;HRun=0;HaplotypeScore=133.5740;InbreedingCoeff=-0.1451;MQ=62.46;MQ0=36;MQRankSum=2.188;QD=0.68;ReadPosRankSum=1.749;VQSLOD=1.8384;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	1/1:13,0:13:1.78:5,2,0	0/0:32,0:18:0:0,0,0	./.	0/1:21,1:22:23.53:24,0,237	0/0:23,0:22:3.46:0,3,25	1/1:23,0:21:0.77:2,1,0	0/0:33,0:31:8.64:0,9,53	0/0:26,0:25:2.66:0,3,11	0/1:12,3:14:9.97:23,0,10	0/1:9,0:9:23.33:23,0,71	1/1:16,0:14:3.49:8,3,0	0/0:29,0:29:5.56:0,6,72	0/1:24,0:23:47.56:48,0,147	0/0:19,0:19:2.33:0,2,23	0/1:21,0:20:12.36:12,0,16	0/1:18,1:18:55.03:55,0,255	0/0:16,0:16:0.32:0,0,202	0/0:21,0:20:5.95:0,6,47	0/1:19,0:18:1.91:2,0,2	0/1:41,0:40:1.88:2,0,39	0/1:18,0:18:3.22:8,0,3	./.	0/1:28,0:27:0.18:0,0,1	0/1:16,1:16:16.49:16,0,216	0/1:24,1:23:99:105,0,119	0/0:21,0:21:8.36:0,8,70	0/0:7,0:4:2.98:0,3,22
chr10	50666880	.	TGC	T	2656.19	PASS	AB=1.000;AC=38;AF=0.792;AN=48;BaseQRankSum=8.728;DP=390;FS=28.070;HRun=0;HaplotypeScore=81.7086;InbreedingCoeff=0.0298;MQ=46.10;MQ0=52;MQRankSum=-0.076;QD=7.38;ReadPosRankSum=-2.968;VQSLOD=0.9606;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	1/1:12,1:12:23.09:191,23,0	./.	./.	0/1:17,0:16:5.01:5,0,275	1/1:2,10:10:2.99:24,3,0	1/1:18,1:13:35.85:288,36,0	1/1:12,0:9:6.77:102,7,0	1/1:21,0:17:35.42:254,35,0	0/1:16,0:11:13.64:14,0,67	0/1:10,0:9:18.18:18,0,126	1/1:7,0:6:11.92:89,12,0	1/1:17,0:16:31.95:267,32,0	0/1:16,0:14:4.38:4,0,248	1/1:17,0:16:12.02:113,12,0	1/1:10,0:9:17.98:151,18,0	0/1:26,0:25:48.01:48,0,339	0/0:13,0:11:1.38:0,1,237	1/1:11,0:9:19.58:136,20,0	1/1:13,0:12:32.84:257,33,0	1/1:31,0:23:35.88:290,36,0	1/1:14,0:13:22.92:164,23,0	./.	1/1:13,1:14:17.96:146,18,0	0/1:19,0:17:73.98:74,0,185	0/1:23,0:19:43.78:44,0,185	1/1:9,0:9:15.31:111,15,0	0/1:13,0:8:4.26:4,0,71
chr10	50666898	.	C	CGTGT	111.91	PASS	AB=0.895;AC=16;AF=0.364;AN=44;BaseQRankSum=4.671;DP=402;FS=9.294;HRun=0;HaplotypeScore=106.1658;InbreedingCoeff=0.5154;MQ=44.38;MQ0=50;MQRankSum=1.720;QD=0.70;ReadPosRankSum=-4.506;VQSLOD=-0.2661;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	./.	1/1:13,0:12:8.41:127,8,0	0/0:8,0:2:3:0,3,46	./.	0/0:22,0:21:22.16:0,22,439	1/1:17,0:15:2.80:7,3,0	./.	1/1:8,0:7:5.87:36,6,0	0/1:15,0:12:0:0,0,0	0/0:16,0:10:18.06:0,18,290	0/0:11,0:9:9.03:0,9,149	./.	1/1:18,0:16:0.52:2,1,0	0/0:16,0:16:35.14:0,35,450	0/1:5,12:17:0:0,0,0	1/1:11,0:10:5.31:28,5,0	0/0:24,0:23:52.88:0,53,673	0/0:16,0:13:11:0,11,315	0/0:10,0:6:0.75:0,1,9	0/0:13,0:13:0:0,0,0	0/1:29,0:20:0.30:1,0,0	./.	./.	1/1:14,0:13:1.99:4,2,0	0/0:13,0:11:12.65:0,13,204	0/0:23,0:20:23.81:0,24,364	0/1:16,0:16:10.79:27,0,11	0/0:10,0:7:16.29:0,16,204
chr10	50666917	.	GTT	G	1197.40	PASS	AB=0.969;AC=22;AF=0.423;AN=52;BaseQRankSum=9.351;DP=413;FS=4.107;HRun=3;HaplotypeScore=88.5532;InbreedingCoeff=0.5428;MQ=50.66;MQ0=19;MQRankSum=0.350;QD=6.80;ReadPosRankSum=-1.592;VQSLOD=-0.2632;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:3.60:0,4,7	0/1:11,0:11:58.76:59,0,149	0/0:19,0:6:10.73:0,11,100	0/0:16,0:1:0:0,0,0	0/0:24,0:23:45.88:0,46,766	1/1:11,1:12:17.96:144,18,0	1/1:2,14:14:8.95:68,9,0	0/1:14,0:14:43.98:110,0,44	0/1:6,1:7:2.90:57,0,3	0/0:16,0:13:34.94:0,35,439	0/0:13,0:12:28.26:0,28,335	1/1:5,0:5:7.21:48,7,0	1/1:10,0:9:8.41:59,8,0	0/0:17,0:16:36.14:0,36,593	0/0:16,0:16:10.53:0,11,79	1/1:9,1:10:17.12:140,17,0	0/0:25,0:25:54.09:0,54,960	0/0:20,0:19:5.34:0,5,475	1/1:8,0:6:8.77:56,9,0	./.	1/1:31,2:27:24.31:280,24,0	./.	0/0:7,0:7:0.47:0,0,1	1/1:14,2:15:20.95:167,21,0	0/1:18,0:17:25.16:25,0,409	0/0:21,0:19:3.50:0,4,472	1/1:16,0:16:11.31:166,11,0	0/0:9,0:9:24.03:0,24,346
chr10	50666923	.	GTGTGTGTGTT	G	4944.32	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=7.272;DP=455;FS=19.416;HRun=0;HaplotypeScore=128.4220;InbreedingCoeff=0.7482;MQ=50.72;MQ0=18;MQRankSum=0.347;QD=26.58;ReadPosRankSum=-4.227;VQSLOD=1.3313;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:5.64:0,6,13	0/0:11,0:11:23.52:0,24,479	0/0:29,0:8:19.68:0,20,357	0/0:22,0:3:2.53:0,3,53	0/0:25,0:24:59.94:0,60,1705	0/1:11,0:11:2.54:397,0,3	1/1:15,0:14:12.04:206,12,0	0/1:17,0:17:15.90:374,0,16	0/1:7,0:7:2.23:217,0,2	0/0:14,0:13:36.07:0,36,1041	0/0:11,0:11:33.11:0,33,933	1/1:5,0:5:11.63:182,12,0	1/1:11,0:10:23.46:368,23,0	0/0:15,0:14:32.54:0,33,1268	0/0:17,0:17:17.42:0,17,317	1/1:14,0:14:30.23:509,30,0	0/0:26,0:26:68.98:0,69,2267	0/0:21,0:20:53.80:0,54,1530	1/1:4,8:9:6.88:209,7,0	1/1:0,12:12:24.08:304,24,0	1/1:33,0:28:55.79:782,56,0	1/1:3,10:12:18.06:215,18,0	0/0:0,8:8:0.94:0,1,1	1/1:18,0:17:38.18:559,38,0	0/0:19,0:18:47.84:0,48,1179	0/0:23,0:23:44.89:0,45,1440	1/1:18,0:18:38.21:624,38,0	0/0:8,0:8:21.06:0,21,559
chr10	50670578	.	A	ATTATTTAT	620.03	PASS	AB=1.000;AC=17;AF=0.425;AN=40;BaseQRankSum=-2.708;DP=291;FS=9.192;HRun=0;HaplotypeScore=78.9159;InbreedingCoeff=0.5672;MQ=64.74;MQ0=2;MQRankSum=0.751;QD=6.39;ReadPosRankSum=-1.798;VQSLOD=-0.1856;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:9,0:9:2.92:0,3,17	./.	./.	1/1:9,0:12:9.01:101,9,0	0/0:11,0:14:9.01:0,9,117	./.	0/0:40,0:38:0:0,0,0	0/0:6,0:8:2.60:0,3,10	1/1:4,0:5:2.99:24,3,0	1/1:3,0:5:5.99:49,6,0	./.	0/0:7,0:7:3.01:0,3,50	1/1:4,0:5:5.83:39,6,0	0/0:10,0:10:3.01:0,3,56	0/0:4,0:7:6.02:0,6,105	1/1:14,13:29:15.03:337,15,0	1/1:15,4:19:3.01:121,3,0	0/0:9,0:13:12:0,12,188	0/1:6,0:6:0:0,0,0	1/1:5,0:6:0.89:2,1,0	./.	./.	./.	0/0:14,0:14:15.05:0,15,341	1/1:10,0:10:6:80,6,0	0/0:12,0:16:9.01:0,9,125	0/0:18,0:18:24.08:0,24,577
chr10	50676563	.	TTCTCTCTCTCTCTCTCTC	T	601.86	PASS	AB=0.976;AC=8;AF=0.160;AN=50;BaseQRankSum=2.478;DP=553;FS=7.638;HRun=0;HaplotypeScore=233.5385;InbreedingCoeff=0.3866;MQ=59.70;MQ0=13;MQRankSum=-0.305;QD=6.69;ReadPosRankSum=1.544;VQSLOD=1.3946;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:19,0:18:13.97:41,0,14	0/0:4,0:5:3.01:0,3,56	./.	./.	0/0:16,0:16:3.01:0,3,117	0/0:14,0:14:5.91:0,6,130	0/0:11,0:11:3.48:0,3,36	0/0:36,0:35:2.97:0,3,20	0/1:17,0:17:2.74:3,0,491	0/0:29,0:29:20.74:0,21,761	0/0:15,0:15:3.01:0,3,162	0/0:21,0:20:21.07:0,21,1370	0/0:13,0:12:18.06:0,18,848	0/0:24,0:21:24.08:0,24,1282	0/0:17,0:16:18.06:0,18,629	0/0:22,0:22:12.03:0,12,261	0/0:19,0:18:9.50:0,10,484	0/0:24,0:21:21.07:0,21,1115	1/1:24,5:27:11.52:588,12,0	./.	1/1:11,0:9:5.97:46,6,0	0/0:16,0:16:15.05:0,15,674	0/0:23,0:23:16.30:0,16,487	0/0:28,0:28:26.98:0,27,1548	0/0:19,0:19:6.02:0,6,349	0/0:31,0:31:24.08:0,24,1359	1/1:12,0:12:3.01:47,3,0	0/0:11,0:10:4.81:0,5,30
chr10	50676600	.	TCTCTCTCTC	T	252.18	PASS	AB=0.917;AC=7;AF=0.135;AN=52;BaseQRankSum=6.445;DP=433;FS=22.642;HRun=0;HaplotypeScore=142.1784;InbreedingCoeff=0.0652;MQ=43.85;MQ0=41;MQRankSum=-4.617;QD=2.74;ReadPosRankSum=-2.100;VQSLOD=0.9704;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:19:8.78:0,9,81	1/1:4,0:2:2.50:9,2,0	./.	./.	0/0:11,0:10:15.05:0,15,275	0/1:23,1:20:22.57:23,0,306	0/1:11,1:10:1.55:2,0,92	0/0:17,0:13:39.12:0,39,485	0/1:12,2:14:99:126,0,162	0/0:18,0:17:51.17:0,51,869	0/0:10,0:9:12.04:0,12,248	0/0:20,0:19:13.51:0,14,872	0/0:15,0:13:32.82:0,33,773	0/0:21,0:18:39.13:0,39,949	0/0:19,0:19:18.20:0,18,228	0/1:15,3:18:50.35:50,0,222	0/0:17,0:17:45.13:0,45,753	0/0:20,0:17:51.17:0,51,1145	0/1:19,0:16:99:158,0,351	0/0:13,0:13:12.92:0,13,152	0/0:16,0:12:18.39:0,18,205	0/0:12,0:11:19.96:0,20,421	0/0:16,0:16:21.16:0,21,344	0/0:24,0:23:44.50:0,45,1020	0/0:21,0:20:36.12:0,36,684	0/0:28,0:22:63.21:0,63,1517	0/0:9,0:8:14.87:0,15,170	0/0:11,0:7:18.06:0,18,226
chr10	50676617	.	CTG	C	2002.03	PASS	AB=0.992;AC=28;AF=0.500;AN=56;BaseQRankSum=2.074;DP=540;FS=5.224;HRun=0;HaplotypeScore=122.0239;InbreedingCoeff=0.5164;MQ=46.86;MQ0=40;MQRankSum=1.579;QD=6.36;ReadPosRankSum=-2.893;VQSLOD=2.6429;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:21:14.90:107,15,0	1/1:5,0:3:5.87:34,6,0	0/0:15,0:3:1.91:0,2,24	0/1:18,0:6:0.59:1,0,14	0/0:15,0:15:6.28:0,6,190	0/0:25,0:23:35.80:0,36,276	0/0:20,0:18:23.75:0,24,175	1/1:13,22:31:51.15:491,51,0	0/0:13,0:13:24.61:0,25,161	0/0:27,0:25:21.09:0,21,321	0/1:12,0:11:9.59:10,0,80	0/1:25,0:23:5.94:114,0,6	1/1:20,0:18:14.27:208,14,0	0/0:20,0:19:3.30:0,3,177	1/1:10,0:15:2.92:17,3,0	0/0:20,0:19:2.24:0,2,177	0/0:20,0:20:25.99:0,26,290	0/1:20,0:19:0.87:1,0,185	0/1:28,0:22:4.16:215,0,4	1/1:16,0:16:23.88:188,24,0	1/1:23,0:18:20.34:157,20,0	1/1:9,0:8:17.83:132,18,0	1/1:18,0:18:3.88:170,4,0	1/1:26,0:25:1.87:209,2,0	0/0:21,0:21:19.36:0,19,306	0/0:28,0:23:8.32:0,8,228	1/1:11,0:10:17.88:132,18,0	0/1:10,0:7:0.01:0,0,108
chr10	50676683	.	TTG	T	5421.16	PASS	AB=0.923;AC=23;AF=0.411;AN=56;BaseQRankSum=12.280;DP=719;FS=18.506;HRun=0;HaplotypeScore=129.7151;InbreedingCoeff=0.7853;MQ=53.20;MQ0=31;MQRankSum=1.371;QD=17.60;ReadPosRankSum=3.504;VQSLOD=3.4076;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,34:40:68.80:734,69,0	0/0:9,0:8:24.08:0,24,382	0/0:42,0:8:21:0,21,283	0/0:46,0:13:10.40:0,10,268	0/0:23,1:24:22.90:0,23,814	1/1:2,16:18:39.07:466,39,0	1/1:8,26:34:51.06:597,51,0	0/0:31,1:30:29.01:0,29,946	1/1:3,19:22:48.06:561,48,0	0/0:35,0:34:78.18:0,78,1192	0/0:17,0:17:42.14:0,42,679	1/1:2,24:26:39.10:484,39,0	1/1:4,14:17:27.04:315,27,0	0/0:11,0:11:18.04:0,18,268	0/0:20,0:20:45.15:0,45,735	1/1:3,24:28:43.14:468,43,0	0/0:21,0:21:54.11:0,54,818	0/1:11,1:12:4.10:4,0,459	0/0:32,0:31:75.12:0,75,1125	0/0:22,0:22:60.20:0,60,963	0/0:51,3:49:9.42:0,9,1059	1/1:3,12:15:27.05:335,27,0	1/1:5,13:18:35.94:423,36,0	1/1:2,40:44:83.90:995,84,0	0/1:22,1:23:14.34:14,0,772	0/0:31,0:31:81.25:0,81,1274	0/0:15,0:15:39.11:0,39,593	0/1:7,1:8:25.16:25,0,135
chr10	50676773	.	GTGTCTC	G	1637.12	PASS	AB=0.703;AC=9;AF=0.161;AN=56;BaseQRankSum=6.452;DP=699;FS=0.000;HRun=0;HaplotypeScore=187.2570;InbreedingCoeff=0.7906;MQ=58.12;MQ0=26;MQRankSum=-3.189;QD=12.99;ReadPosRankSum=-4.746;VQSLOD=1.7658;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:47.09:0,47,1495	0/0:18,0:18:29.90:0,30,787	0/0:39,0:12:20.08:0,20,279	0/0:50,0:21:0.19:0,0,472	0/0:15,0:15:24.08:0,24,754	0/0:16,0:15:33.11:0,33,986	0/0:37,0:35:48.13:0,48,1322	0/1:15,11:23:41.23:475,0,41	0/0:16,0:16:23.98:0,24,758	0/0:27,0:26:54.12:0,54,1491	0/0:13,0:12:21.07:0,21,666	0/0:32,0:31:60.04:0,60,1860	0/0:27,0:27:61.58:0,62,1943	0/0:21,0:21:45.15:0,45,1373	0/0:20,0:20:16.60:0,17,443	0/0:26,0:26:27.04:0,27,723	0/0:27,0:27:57.19:0,57,1616	0/0:25,0:25:66.20:0,66,1938	1/1:11,8:16:24.03:407,24,0	1/1:3,10:13:11.78:145,12,0	1/1:9,35:42:20.90:354,21,0	0/0:21,0:21:26.53:0,27,888	0/0:15,0:15:17.29:0,17,547	0/0:35,0:35:28.62:0,29,956	0/0:20,0:19:42.14:0,42,1200	0/0:29,0:28:69.23:0,69,1983	1/1:10,13:23:29.37:416,29,0	0/0:8,0:8:18.06:0,18,533
chr10	50676795	.	TTGTGTGTGTGTG	T	903.62	PASS	AB=0.932;AC=26;AF=0.542;AN=48;BaseQRankSum=7.696;DP=624;FS=21.562;HRun=0;HaplotypeScore=210.9963;InbreedingCoeff=0.6647;MQ=45.16;MQ0=45;MQRankSum=-5.862;QD=2.61;ReadPosRankSum=-1.332;VQSLOD=1.3073;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:32,0:33:0.76:4,1,0	1/1:11,0:16:2.93:61,3,0	./.	./.	0/0:14,0:14:15.02:0,15,385	1/1:12,2:13:8.54:52,9,0	0/1:35,1:32:0.09:0,0,2	./.	1/1:13,2:15:5.60:77,6,0	0/0:22,0:26:33.07:0,33,1058	0/0:13,0:13:12.04:0,12,507	1/1:23,0:26:8.95:184,9,0	1/1:23,0:23:2.75:15,3,0	0/0:21,0:20:18.06:0,18,542	1/1:8,0:17:9.03:185,9,0	1/1:7,11:18:11.87:80,12,0	0/0:24,0:31:42.14:0,42,1666	0/0:24,0:24:33.11:0,33,1449	./.	1/1:10,0:12:2.69:49,3,0	0/1:45,0:38:0:0,0,0	0/1:17,0:21:0.14:0,0,0	1/1:11,0:13:0.89:2,1,0	0/1:30,0:29:0.20:0,0,0	0/0:26,0:23:12.40:0,12,475	0/0:25,0:25:35.86:0,36,1407	1/1:11,0:16:15.05:351,15,0	0/0:9,0:9:12.04:0,12,624
chr10	50676846	.	T	TGCGCGC	5047.12	PASS	AB=1.000;AC=22;AF=0.393;AN=56;BaseQRankSum=-1.416;DP=536;FS=12.197;HRun=0;HaplotypeScore=150.1102;InbreedingCoeff=0.8347;MQ=47.72;MQ0=26;MQRankSum=2.201;QD=21.57;ReadPosRankSum=2.053;VQSLOD=4.1918;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:27,2:26:23.29:470,23,0	0/0:10,0:10:12.04:0,12,235	0/0:9,0:4:9.03:0,9,169	0/0:20,0:7:14.63:0,15,270	0/0:12,0:12:26.98:0,27,512	1/1:11,0:11:18.05:309,18,0	1/1:23,0:21:24.08:712,24,0	0/0:22,0:21:5.27:0,5,437	1/1:17,0:17:42.08:645,42,0	0/0:31,0:30:61.45:0,61,1295	0/0:19,0:19:27.08:0,27,532	1/1:29,0:28:60.16:986,60,0	1/1:9,0:9:15.01:247,15,0	0/0:15,0:14:30.08:0,30,597	0/0:28,0:27:55.38:0,55,960	1/1:20,0:20:35.78:534,36,0	0/0:32,0:32:57.19:0,57,1155	0/0:15,0:14:39.13:0,39,751	0/0:15,0:10:18.49:0,18,174	0/0:16,0:16:32.79:0,33,273	0/0:31,0:28:23.94:0,24,199	1/1:16,0:16:25.73:402,26,0	1/1:20,0:19:26.59:469,27,0	1/1:24,3:24:14.59:241,15,0	0/0:17,0:17:23.82:0,24,535	0/1:25,0:25:2.67:3,0,1104	0/1:8,0:8:29.10:29,0,72	0/0:10,0:9:21.06:0,21,372
chr10	50679353	.	C	CT	11084.97	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-10.066;DP=584;FS=9.830;HRun=5;HaplotypeScore=63.1238;InbreedingCoeff=0.9978;MQ=86.35;MQ0=0;MQRankSum=-0.581;QD=32.51;ReadPosRankSum=1.765;VQSLOD=5.1350;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,30:31:90.29:1170,90,0	1/1:0,7:7:18.06:237,18,0	0/0:20,0:20:41.15:0,41,404	0/0:19,0:19:34.71:0,35,387	0/0:31,0:31:87.20:0,87,926	1/1:2,26:28:69.22:908,69,0	1/1:2,18:20:39.13:513,39,0	1/1:2,28:30:87.25:1099,87,0	1/1:0,8:8:24.08:315,24,0	0/0:19,0:19:57.14:0,57,613	0/0:21,0:21:51.12:0,51,545	1/1:2,15:17:45.15:592,45,0	1/1:2,19:21:57.19:750,57,0	0/0:30,0:30:84.20:0,84,894	1/1:2,13:15:36.12:474,36,0	1/1:1,12:13:33.11:434,33,0	0/0:29,0:29:75.14:0,75,787	0/0:19,0:19:53.30:0,53,534	1/1:5,13:18:39.09:482,39,0	1/1:2,20:22:60.14:765,60,0	1/1:2,27:29:60.20:789,60,0	1/1:4,17:21:42.14:553,42,0	1/1:5,12:17:39.12:504,39,0	1/1:1,17:18:48.16:631,48,0	0/0:15,0:15:45.09:0,45,474	0/0:33,0:33:90.20:0,90,947	1/1:2,24:26:66.21:868,66,0	0/0:7,0:7:21.05:0,21,226
chr10	50679656	.	T	TG	8547.86	PASS	AB=0.585;AC=31;AF=0.554;AN=56;BaseQRankSum=-10.603;DP=551;FS=5.524;HRun=8;HaplotypeScore=57.1155;InbreedingCoeff=0.8276;MQ=84.96;MQ0=0;MQRankSum=-5.304;QD=24.08;ReadPosRankSum=1.470;VQSLOD=5.6485;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,38:43:85.43:1092,85,0	0/1:1,5:6:15.43:92,0,15	0/0:18,0:18:41.37:0,41,365	0/0:17,0:17:21.02:0,21,260	0/0:24,0:24:72.04:0,72,658	1/1:8,19:27:30.59:598,31,0	1/1:1,22:23:45.13:518,45,0	1/1:5,12:17:34.50:387,35,0	0/1:5,9:14:0.39:250,0,0	0/0:12,0:12:30.01:0,30,274	0/0:15,0:15:36.02:0,36,329	1/1:2,14:16:30.09:346,30,0	1/1:6,17:23:51.15:586,51,0	0/0:28,0:28:78.03:0,78,713	1/1:3,18:21:48.14:551,48,0	0/1:5,10:15:0.25:250,0,0	0/0:20,0:20:60:0,60,542	0/0:19,0:18:51:0,51,461	1/1:2,22:24:66.19:760,66,0	1/1:10,13:23:39.11:440,39,0	1/1:7,22:29:63.19:727,63,0	1/1:0,14:15:44.97:499,45,0	1/1:1,14:15:30.09:345,30,0	1/1:3,18:21:33.10:381,33,0	0/0:24,0:24:63.02:0,63,576	0/0:18,0:18:42:0,42,380	1/1:1,22:23:63.19:727,63,0	0/0:1,0:1:3:0,3,27
chr10	50680831	.	TA	T	6996.91	PASS	AB=0.792;AC=34;AF=0.607;AN=56;BaseQRankSum=11.426;DP=639;FS=1.415;HRun=11;HaplotypeScore=71.9004;InbreedingCoeff=0.8422;MQ=66.94;MQ0=1;MQRankSum=-3.496;QD=17.67;ReadPosRankSum=-0.203;VQSLOD=5.6318;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,21:22:56.93:468,57,0	1/1:0,0:13:24.44:71,24,0	0/1:15,1:14:11.72:12,0,129	0/0:12,0:13:13.54:0,14,217	0/0:32,2:37:46.45:0,46,856	1/1:3,26:29:74.89:616,75,0	1/1:2,14:16:38.94:320,39,0	1/1:5,31:37:91.90:739,92,0	1/1:1,19:20:47.94:394,48,0	0/0:22,0:22:54.13:0,54,571	0/0:25,0:25:60.13:0,60,627	1/1:2,8:10:23.97:197,24,0	1/1:3,17:20:41.90:345,42,0	0/0:35,0:36:81.06:0,81,839	1/1:1,0:27:52.96:153,53,0	1/1:2,13:15:35.96:296,36,0	0/0:14,0:14:36.09:0,36,384	0/0:11,0:11:24.06:0,24,256	1/1:2,14:16:12.96:313,13,0	1/1:2,32:34:57.89:682,58,0	1/1:2,15:17:41.94:345,42,0	1/1:3,28:31:59.72:641,60,0	1/1:4,14:18:9.95:288,10,0	0/1:4,5:9:17.01:84,0,17	0/0:30,0:30:81.06:0,81,840	0/0:34,0:34:78.19:0,78,825	1/1:4,42:46:99:1034,126,0	0/0:19,0:20:59.98:0,60,622
chr10	50680958	.	A	ATGTGTGTG	3883.45	PASS	AB=0.842;AC=25;AF=0.446;AN=56;BaseQRankSum=5.047;DP=686;FS=10.913;HRun=0;HaplotypeScore=186.9603;InbreedingCoeff=0.7176;MQ=61.79;MQ0=1;MQRankSum=-6.279;QD=11.70;ReadPosRankSum=-1.547;VQSLOD=1.6258;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:15.58:0,16,769	1/1:4,0:12:12.03:218,12,0	0/1:22,0:13:0.06:0,0,70	0/0:24,0:18:6:0,6,54	0/0:31,0:34:81.16:0,81,1692	1/1:14,0:36:15.02:439,15,0	1/1:9,2:25:9.03:327,9,0	0/1:26,0:44:72.65:149,0,73	1/1:9,0:16:12.04:415,12,0	0/0:24,0:24:34.89:0,35,637	0/0:27,0:28:51.16:0,51,1099	1/1:25,0:25:18.03:401,18,0	1/1:23,0:23:21.05:530,21,0	0/0:23,0:25:54.12:0,54,1235	1/1:10,0:29:29.87:645,30,0	1/1:8,2:15:6.02:228,6,0	0/0:20,0:20:33.11:0,33,833	0/0:27,0:31:22.91:0,23,659	0/1:10,0:13:5.81:6,0,21	0/0:8,0:15:8.17:0,8,40	0/0:17,0:37:33.28:0,33,236	1/1:17,0:26:7.69:214,8,0	1/1:13,1:25:5.60:208,6,0	1/1:7,1:19:3.01:104,3,0	0/0:23,0:23:51.06:0,51,1121	0/0:30,0:32:62.45:0,62,1117	0/0:14,0:24:32.14:0,32,254	0/0:11,0:11:18.06:0,18,428
chr10	50682765	.	TTCTCTC	T	583.82	PASS	AB=0.830;AC=12;AF=0.231;AN=52;BaseQRankSum=5.265;DP=441;FS=8.630;HRun=0;HaplotypeScore=137.9956;InbreedingCoeff=0.2721;MQ=43.09;MQ0=22;MQRankSum=-0.133;QD=4.91;ReadPosRankSum=-2.903;VQSLOD=1.3092;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:3,0:14:7.55:0,8,58	0/0:7,0:7:2.40:0,2,14	./.	./.	0/0:19,0:19:23.51:0,24,291	0/0:27,0:24:11.66:0,12,73	0/0:17,0:15:0.79:0,1,17	0/1:11,11:19:10.64:280,0,11	0/0:14,0:14:5.17:0,5,38	0/0:21,0:21:33.09:0,33,536	0/0:24,0:23:44.30:0,44,665	0/1:11,0:11:5.21:5,0,42	0/0:13,0:13:3.34:0,3,25	0/0:13,0:13:23.64:0,24,352	0/0:12,0:8:6.19:0,6,87	1/1:10,0:9:1.68:4,2,0	0/0:23,0:22:38.59:0,39,483	0/1:12,0:11:21.93:22,0,105	1/1:8,10:15:2.23:256,2,0	1/1:7,5:11:5.04:31,5,0	1/1:17,0:16:12.06:97,12,0	0/0:21,0:19:6.60:0,7,45	0/0:25,0:25:8.34:0,8,64	0/0:18,0:17:6.45:0,6,48	0/0:11,0:9:20.55:0,21,324	0/0:16,0:16:28.40:0,28,410	0/1:8,9:16:24.57:25,0,43	0/0:14,0:9:8.90:0,9,102
chr10	50683326	.	ACT	A	1009.59	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.614;DP=598;FS=3.712;HRun=0;HaplotypeScore=72.3231;InbreedingCoeff=0.9962;MQ=78.92;MQ0=0;MQRankSum=-2.477;QD=38.83;ReadPosRankSum=1.130;VQSLOD=5.7961;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:84.29:0,84,1562	0/0:10,0:10:30.09:0,30,531	0/0:18,0:18:44.70:0,45,798	0/0:19,0:18:48.11:0,48,745	0/0:27,0:27:81.28:0,81,1508	0/0:31,0:31:93.32:0,93,1730	0/0:10,0:10:30.10:0,30,545	0/0:23,0:23:63.22:0,63,1170	0/0:10,0:10:30.10:0,30,562	0/0:29,0:29:84.28:0,84,1544	0/0:24,0:24:69.22:0,69,1248	0/0:19,0:19:57.20:0,57,1066	0/0:23,0:23:66.23:0,66,1232	1/1:1,25:26:75.25:1104,75,0	0/0:23,0:23:69.24:0,69,1284	0/0:11,0:11:33.11:0,33,618	0/0:24,0:24:69.24:0,69,1292	0/0:16,0:15:45.15:0,45,843	0/0:25,0:25:63.22:0,63,1159	0/0:30,0:30:87.27:0,87,1560	0/0:18,0:18:54.15:0,54,940	0/0:15,0:15:45.15:0,45,843	0/0:21,0:21:54.15:0,54,968	0/0:19,0:19:54.19:0,54,1011	0/0:26,0:26:75.24:0,75,1350	0/0:31,0:31:93.32:0,93,1736	0/0:33,0:32:99:0,99,1816	0/0:8,0:8:24.08:0,24,426
chr10	50684967	.	AT	A	2315.83	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=10.918;DP=598;FS=0.889;HRun=8;HaplotypeScore=59.2365;InbreedingCoeff=0.9957;MQ=80.01;MQ0=1;MQRankSum=-0.268;QD=22.27;ReadPosRankSum=1.612;VQSLOD=4.2382;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,18:19:51.08:492,51,0	0/0:7,0:7:21.05:0,21,242	0/0:19,0:17:31.95:0,32,366	0/0:17,0:14:35.31:0,35,319	0/0:30,0:30:78.24:0,78,942	1/1:1,17:18:51.08:492,51,0	1/1:3,13:16:33.05:319,33,0	0/0:32,0:32:87.24:0,87,1023	1/1:5,23:28:63.10:608,63,0	0/0:23,0:23:63.19:0,63,761	0/0:26,0:26:46.68:0,47,841	0/0:12,0:12:33.09:0,33,386	0/0:20,0:20:57.17:0,57,685	0/0:14,0:15:35.96:0,36,402	0/0:18,0:18:51.15:0,51,605	1/1:1,22:23:59.82:579,60,0	0/0:23,0:23:63.17:0,63,747	0/0:17,0:17:36.07:0,36,417	0/0:24,2:27:17.12:0,17,740	0/0:38,0:38:99:0,108,1281	0/0:8,0:8:24.07:0,24,290	0/0:26,0:26:78.24:0,78,942	0/0:22,0:22:54.17:0,54,652	0/0:20,0:20:60.17:0,60,713	0/0:23,0:23:66.17:0,66,773	0/0:23,0:23:63.19:0,63,761	0/0:38,0:39:99:0,111,1319	0/0:9,0:9:27.07:0,27,315
chr10	50685535	.	GGTGTGTGTGTGTGTGTGTGTGCGTGT	G	2444.15	PASS	AB=0.961;AC=26;AF=0.464;AN=56;BaseQRankSum=-0.732;DP=476;FS=4.285;HRun=0;HaplotypeScore=281.2464;InbreedingCoeff=0.1638;MQ=62.72;MQ0=16;MQRankSum=0.213;QD=7.66;ReadPosRankSum=1.035;VQSLOD=1.6265;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:22:32.89:262,33,0	1/1:8,0:9:11.99:257,12,0	0/1:36,0:15:21.29:21,0,56	0/1:34,0:18:17:98,0,17	0/0:16,0:15:20.95:0,21,780	0/0:21,0:21:35.65:0,36,948	0/1:14,0:13:0.91:1,0,906	0/1:23,0:23:2.18:230,0,2	0/1:7,0:7:59.88:60,0,81	0/0:17,0:17:35.03:0,35,1607	0/0:10,0:9:6.02:0,6,366	0/1:15,0:16:59.42:253,0,59	0/1:13,0:12:55.84:56,0,123	0/1:12,0:12:4.66:5,0,429	1/1:13,0:13:26.97:225,27,0	1/1:16,1:17:26.91:394,27,0	0/0:28,0:28:50.62:0,51,1910	0/0:16,0:16:27.01:0,27,1012	1/1:14,0:14:0.27:95,0,0	0/1:9,14:23:8.62:197,0,9	1/1:14,0:13:20.92:169,21,0	0/1:10,0:10:31.87:32,0,220	0/1:8,0:8:58.84:59,0,95	0/1:22,0:21:91.03:91,0,195	0/0:21,0:21:27.13:0,27,1728	0/0:13,0:13:13.86:0,14,417	1/1:11,0:11:15.45:125,15,0	0/0:15,0:15:24.51:0,25,1698
chr10	50687404	.	CT	C	9691.73	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=12.700;DP=686;FS=5.776;HRun=3;HaplotypeScore=81.4897;InbreedingCoeff=0.9995;MQ=77.02;MQ0=0;MQRankSum=-2.499;QD=34.86;ReadPosRankSum=0.487;VQSLOD=5.3089;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,42:43:99:1488,120,0	0/0:10,0:10:30.10:0,30,432	0/0:18,0:18:48.15:0,48,654	0/0:14,0:14:38.13:0,38,513	0/0:24,0:24:72.24:0,72,1036	1/1:0,19:19:57.18:706,57,0	1/1:1,30:31:84.26:1041,84,0	1/1:0,32:32:93.28:1140,93,0	1/1:2,39:41:99:1413,114,0	0/0:21,0:21:60.19:0,60,847	0/0:27,0:27:75.21:0,75,1057	0/0:29,0:29:87.29:0,87,1252	0/0:22,0:22:63.21:0,63,906	0/0:20,0:20:60.20:0,60,864	0/0:35,0:35:99:0,102,1451	0/0:19,1:20:23:0,23,784	0/0:22,0:22:66.22:0,66,950	0/0:23,0:23:69.21:0,69,973	1/1:0,21:21:63.20:780,63,0	1/1:1,29:30:81.25:1004,81,0	1/1:0,35:35:99:1227,99,0	0/0:27,0:27:81.24:0,81,1100	0/0:22,0:22:63.20:0,63,890	0/0:20,0:20:57.15:0,57,797	0/0:19,0:19:57.16:0,57,798	0/0:19,0:19:57.19:0,57,821	1/1:1,25:26:72.23:893,72,0	0/0:16,0:16:36.12:0,36,518
chr10	50688519	.	C	CTTCCTTGT	17377.85	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=14.938;DP=550;FS=7.223;HRun=0;HaplotypeScore=148.9264;InbreedingCoeff=0.9963;MQ=73.61;MQ0=0;MQRankSum=-15.762;QD=123.25;ReadPosRankSum=4.464;VQSLOD=6.8267;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:84.29:0,84,2517	1/1:0,4:6:18.06:629,18,0	0/0:16,0:16:48.12:0,48,1137	0/0:9,0:8:23.86:0,24,530	0/0:26,0:26:78.27:0,78,2324	1/1:0,14:17:45.15:2073,45,0	1/1:0,7:9:21.07:967,21,0	1/1:0,7:7:21.07:970,21,0	1/1:0,17:17:51.18:2351,51,0	0/0:33,0:33:99:0,99,2624	0/0:18,0:18:54.19:0,54,1469	0/0:26,0:26:78.23:0,78,2212	0/0:34,0:34:96.33:0,96,2908	0/0:28,0:28:75.26:0,75,2230	1/1:0,15:17:45.15:2075,45,0	1/1:1,16:18:48.16:2213,48,0	0/0:24,0:24:72.23:0,72,2033	0/0:10,0:10:30.10:0,30,909	1/1:0,7:8:24.08:1023,24,0	1/1:0,9:10:30.10:1283,30,0	1/1:0,7:9:21.07:926,21,0	0/0:31,0:31:93.31:0,93,2735	0/0:26,0:26:78.27:0,78,2280	0/0:32,0:32:96.30:0,96,2695	0/0:20,0:20:60.21:0,60,1817	0/0:33,0:33:93.31:0,93,2737	1/1:1,17:22:63.21:2869,63,0	0/0:14,0:14:39.13:0,39,1181
chr10	50691658	.	AAC	A	311.68	PASS	AB=0.924;AC=26;AF=0.520;AN=50;BaseQRankSum=3.801;DP=534;FS=10.082;HRun=0;HaplotypeScore=81.1785;InbreedingCoeff=0.3597;MQ=65.44;MQ0=15;MQRankSum=-2.466;QD=1.21;ReadPosRankSum=2.002;VQSLOD=0.8551;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,1:22:9.03:0,9,124	1/1:6,0:7:5.57:38,6,0	./.	./.	0/0:21,0:20:6.45:0,6,105	0/0:7,0:7:2.98:0,3,21	0/0:23,0:22:11.99:0,12,114	./.	0/1:18,1:19:10.20:10,0,184	0/1:24,1:25:11.44:26,0,11	1/1:11,0:14:7.24:32,7,0	0/0:17,0:17:13.80:0,14,140	0/0:9,0:14:15.01:0,15,154	0/1:10,1:11:18.32:18,0,79	1/1:14,0:29:14.20:70,14,0	1/1:8,7:16:5.85:46,6,0	0/1:28,5:33:5.24:5,0,273	1/1:11,5:15:3.01:32,3,0	1/1:13,0:13:2.80:13,3,0	1/1:17,0:20:2.84:14,3,0	0/0:26,0:30:0:0,0,0	0/0:11,0:17:2.99:0,3,24	0/0:12,0:12:6.02:0,6,86	0/0:30,0:36:27.07:0,27,340	1/1:8,0:8:8.84:69,9,0	1/1:24,0:24:0.03:40,0,0	1/1:9,0:15:5.21:23,5,0	1/1:6,1:5:3.48:33,3,0
chr10	50692961	.	C	CT	3233.06	PASS	AB=0.587;AC=21;AF=0.375;AN=56;BaseQRankSum=5.450;DP=648;FS=10.386;HRun=10;HaplotypeScore=78.4020;InbreedingCoeff=0.9207;MQ=78.57;MQ0=2;MQRankSum=-2.595;QD=13.94;ReadPosRankSum=0.711;VQSLOD=2.8511;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,35:44:99:1093,105,0	1/1:1,10:11:27.07:288,27,0	0/0:21,0:19:22:0,22,183	0/0:27,0:23:26.95:0,27,241	0/0:28,0:29:61.64:0,62,594	1/1:2,0:21:42.71:214,43,0	1/1:2,0:10:14.27:72,14,0	0/0:33,0:33:77.88:0,78,640	1/1:1,1:18:40.01:218,40,0	0/0:23,1:25:26.97:0,27,415	0/0:24,0:24:68.91:0,69,564	1/1:4,0:18:42.84:222,43,0	1/1:9,3:32:61.28:356,61,0	0/0:19,0:19:29.73:0,30,387	0/1:8,19:27:16.60:453,0,17	0/0:21,0:22:45.26:0,45,453	0/0:25,0:25:62.86:0,63,508	0/0:12,0:12:29.97:0,30,246	0/0:23,0:23:53.92:0,54,441	0/0:35,0:35:83.84:0,84,690	0/0:7,0:7:20.98:0,21,172	1/1:1,1:15:31.48:163,31,0	1/1:5,1:20:34.32:189,34,0	1/1:1,0:16:37:186,37,0	0/0:22,0:23:53.90:0,54,440	0/0:28,0:28:74.89:0,75,613	0/0:48,1:49:84.76:0,85,892	0/0:11,0:11:26.96:0,27,222
chr10	50694126	.	TGGG	T	4831.02	PASS	AC=18;AF=0.333;AN=54;BaseQRankSum=-0.921;DP=450;FS=5.506;HRun=12;HaplotypeScore=82.7708;InbreedingCoeff=0.9448;MQ=77.05;MQ0=0;MQRankSum=-0.087;QD=30.38;ReadPosRankSum=7.001;VQSLOD=4.1265;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,19:24:57.15:720,57,0	0/0:4,0:11:13.19:0,13,93	0/0:17,0:17:38.12:0,38,604	0/0:10,0:11:2.41:0,2,42	0/0:28,0:29:36.45:0,36,603	1/1:2,16:18:42.11:527,42,0	1/1:0,13:13:39.12:493,39,0	0/0:11,0:17:26.95:0,27,270	1/1:2,14:17:45.06:549,45,0	0/0:5,0:5:12.04:0,12,209	0/0:17,0:18:33.11:0,33,545	1/1:2,17:19:51.16:644,51,0	1/1:2,15:17:45.13:569,45,0	0/0:16,0:16:21.96:0,22,372	0/0:4,0:20:33.62:0,34,238	./.	0/0:16,0:19:39.05:0,39,575	0/0:8,0:8:15.05:0,15,239	0/0:9,0:16:23.92:0,24,203	0/0:7,0:18:22.95:0,23,162	0/0:5,0:18:26.40:0,26,189	1/1:3,24:27:66.08:779,66,0	1/1:3,11:14:21.01:247,21,0	1/1:1,9:10:24.07:303,24,0	0/0:19,0:19:42.14:0,42,743	0/0:14,0:14:15.05:0,15,292	0/0:11,0:28:47.40:0,47,336	0/0:4,0:5:9.03:0,9,161
chr10	50694256	.	A	AGT	1297.54	PASS	AB=0.852;AC=21;AF=0.404;AN=52;BaseQRankSum=-4.577;DP=543;FS=4.885;HRun=0;HaplotypeScore=87.4920;InbreedingCoeff=0.1644;MQ=64.35;MQ0=15;MQRankSum=0.470;QD=4.74;ReadPosRankSum=-2.006;VQSLOD=1.4302;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:26,3:26:9.32:227,9,0	0/1:3,2:5:17.35:36,0,17	./.	0/1:37,0:19:0:0,0,0	0/0:28,0:26:30.05:0,30,309	1/1:17,3:20:3.01:45,3,0	0/1:18,4:22:26.21:38,0,26	1/1:19,0:18:0.47:1,0,0	0/1:14,4:18:42.68:171,0,43	0/1:14,0:18:8.95:13,0,9	0/0:9,0:13:5.68:0,6,28	0/1:10,5:16:14.19:194,0,14	0/1:11,3:14:22.28:137,0,22	0/0:18,0:18:15.01:0,15,148	1/1:5,14:18:16.97:263,17,0	./.	0/0:20,0:20:18.03:0,18,181	0/1:15,0:16:24.24:37,0,24	0/0:10,0:15:12.25:0,12,58	0/0:11,0:24:13.79:0,14,65	0/0:23,0:36:14.04:0,14,67	0/1:11,6:17:49.24:118,0,49	1/1:8,1:10:3.01:44,3,0	1/1:10,4:14:7.92:131,8,0	0/0:11,0:19:11.36:0,11,56	0/0:24,0:24:20.29:0,20,224	0/0:13,0:23:16.02:0,16,75	0/0:11,0:10:0.90:0,1,65
chr10	50695383	.	AACACAC	A	1039.25	PASS	AB=0.976;AC=24;AF=0.500;AN=48;BaseQRankSum=5.443;DP=461;FS=2.242;HRun=0;HaplotypeScore=104.7491;InbreedingCoeff=0.5751;MQ=56.32;MQ0=10;MQRankSum=-5.308;QD=4.39;ReadPosRankSum=0.750;VQSLOD=2.1183;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:0:0,0,0	0/0:9,0:8:9.03:0,9,253	./.	./.	0/0:22,0:21:12.04:0,12,304	1/1:16,0:19:3:42,3,0	1/1:13,2:15:6.02:120,6,0	0/1:27,0:27:0:0,0,0	1/1:6,2:14:9.03:162,9,0	0/0:15,0:15:8.15:0,8,256	0/0:23,0:21:6.02:0,6,175	1/1:11,7:18:8.86:178,9,0	1/1:15,1:15:2.75:60,3,0	0/0:14,0:14:12.04:0,12,322	0/0:15,0:15:9.03:0,9,248	./.	0/0:17,0:17:13.58:0,14,264	0/0:12,0:11:9.03:0,9,196	1/1:14,0:15:3.01:42,3,0	1/1:20,0:19:9.03:117,9,0	./.	1/1:9,0:15:6.02:84,6,0	1/1:11,2:10:3.01:60,3,0	1/1:18,4:21:6.02:120,6,0	0/0:13,0:12:12.04:0,12,349	0/1:19,1:19:39.17:50,0,39	1/1:9,0:20:11.93:167,12,0	0/0:7,0:6:6.02:0,6,86
chr10	50698695	.	AAAAGAAAGAAAG	A	1711.52	PASS	AC=10;AF=0.192;AN=52;BaseQRankSum=5.641;DP=464;FS=7.533;HRun=0;HaplotypeScore=156.2652;InbreedingCoeff=0.8752;MQ=54.16;MQ0=8;MQRankSum=-5.989;QD=20.14;ReadPosRankSum=-0.391;VQSLOD=2.0108;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:72.72:0,73,4041	0/0:3,0:10:21.07:0,21,1111	./.	./.	0/0:31,0:31:54.16:0,54,2826	0/0:16,0:16:27.09:0,27,1523	0/0:10,0:10:12.04:0,12,676	1/1:15,0:15:3.01:60,3,0	0/0:9,0:9:18.06:0,18,927	0/0:25,0:25:54.19:0,54,2988	0/0:16,0:16:36.12:0,36,1996	0/0:16,0:16:21.07:0,21,1172	0/0:13,0:12:24.08:0,24,1259	0/0:13,0:13:27.09:0,27,1451	0/0:11,0:17:30.09:0,30,1407	0/0:17,0:17:36.12:0,36,1679	0/0:26,0:26:54.16:0,54,2755	0/0:14,0:14:21.07:0,21,1004	1/1:15,2:17:5.96:125,6,0	1/1:10,11:21:24.05:708,24,0	1/1:7,1:8:6.02:148,6,0	0/0:18,0:18:30.10:0,30,1734	0/0:22,0:22:51.18:0,51,2787	0/0:17,0:17:30.09:0,30,1595	0/0:22,0:23:57.20:0,57,3091	0/0:14,0:14:24.08:0,24,1118	1/1:12,12:24:24.08:823,24,0	0/0:6,0:5:9.03:0,9,427
chr10	50700884	.	TCAGG	T	1242	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.904;DP=583;FS=4.054;HRun=0;HaplotypeScore=93.0857;InbreedingCoeff=0.9824;MQ=88.73;MQ0=0;MQRankSum=-5.326;QD=51.75;ReadPosRankSum=1.015;VQSLOD=4.8060;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:90.31:0,90,2401	0/0:9,0:9:27.08:0,27,683	0/0:25,0:25:66.21:0,66,1721	0/0:18,0:18:53.90:0,54,1188	0/0:27,0:27:78.27:0,78,2136	0/0:25,0:25:75.26:0,75,2055	0/0:13,0:13:36.12:0,36,986	0/0:33,0:33:96.32:0,96,2532	0/0:19,0:19:54.19:0,54,1472	0/0:21,0:21:60.21:0,60,1637	0/0:24,0:24:72.25:0,72,1971	0/0:18,0:18:51.18:0,51,1395	0/0:28,0:28:84.27:0,84,2223	0/0:19,0:19:54.19:0,54,1479	0/0:21,0:21:60.21:0,60,1644	1/1:0,24:24:69.24:1337,69,0	0/0:17,0:17:48.15:0,48,1246	0/0:10,0:10:27.09:0,27,718	0/0:15,0:15:45.15:0,45,1176	0/0:24,0:24:72.25:0,72,1965	0/0:16,0:16:48.15:0,48,1255	0/0:25,0:25:75.26:0,75,2032	0/0:27,0:27:75.26:0,75,2024	0/0:17,0:17:51.18:0,51,1376	0/0:31,0:31:84.29:0,84,2256	0/0:15,0:15:45.15:0,45,1233	0/0:25,0:24:75.24:0,75,1960	0/0:6,0:6:15.05:0,15,411
chr10	50701584	.	T	TGAGAGAGGGAGAGAGGGAGAA	217.87	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.192;DP=749;FS=3.835;HRun=0;HaplotypeScore=388.6174;InbreedingCoeff=0.7383;MQ=72.39;MQ0=1;MQRankSum=-0.560;QD=8.38;ReadPosRankSum=-3.236;VQSLOD=0.5267;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:48.47:0,48,2620	0/0:15,0:15:36.12:0,36,1785	0/0:26,0:23:14.59:0,15,651	0/0:26,0:23:17.39:0,17,549	0/0:29,0:29:72.22:0,72,3475	0/0:26,0:26:69.21:0,69,3153	0/0:23,0:23:57.20:0,57,2363	0/0:23,0:23:51.17:0,51,1568	0/0:36,0:36:96.30:0,96,4470	0/0:31,0:31:78.26:0,78,3272	0/0:24,0:24:54.18:0,54,2583	0/0:25,0:25:60.16:0,60,2241	0/0:37,0:37:93.28:0,93,4324	0/0:32,0:32:87.28:0,87,4502	0/0:22,0:22:57.18:0,57,2887	1/1:2,12:26:2.91:295,3,0	0/0:33,0:32:93.23:0,93,4266	0/0:18,0:18:51.16:0,51,2342	0/0:29,0:29:66.20:0,66,2186	0/0:27,0:27:69.19:0,69,3124	0/0:42,0:42:96.27:0,96,4410	0/0:28,0:28:63.18:0,63,2462	0/0:29,0:29:69.18:0,69,2805	0/0:32,0:32:84.27:0,84,3917	0/0:25,0:25:75.24:0,75,3819	0/0:27,0:27:78.24:0,78,3258	0/0:26,0:26:57.18:0,57,2867	0/0:6,0:6:12.04:0,12,681
chr10	50701866	.	A	ACAAGTTAT	1187.54	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-3.027;DP=723;FS=1.202;HRun=0;HaplotypeScore=175.6570;InbreedingCoeff=0.9964;MQ=76.61;MQ0=0;MQRankSum=-5.316;QD=53.98;ReadPosRankSum=1.198;VQSLOD=3.3600;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:49:99:0,141,3506	0/0:12,0:12:36.12:0,36,964	0/0:34,0:34:72.22:0,72,1714	0/0:36,0:35:87.27:0,87,2058	0/0:25,0:25:69.24:0,69,1750	0/0:32,0:32:78.27:0,78,2071	0/0:27,0:27:72.23:0,72,1839	0/0:38,0:38:81.28:0,81,2127	0/0:24,0:24:60.21:0,60,1572	0/0:28,0:28:75.26:0,75,1991	0/0:24,0:24:60.21:0,60,1577	0/0:22,0:22:51.18:0,51,1338	0/0:27,0:27:81.28:0,81,2146	0/0:14,0:14:36.12:0,36,926	0/0:31,0:31:78.27:0,78,1961	1/1:10,11:22:30.10:1282,30,0	0/0:29,0:29:75.26:0,75,1913	0/0:14,0:14:33.11:0,33,838	0/0:27,0:27:66.16:0,66,1567	0/0:19,0:19:48.16:0,48,1289	0/0:37,0:37:87.30:0,87,2280	0/0:28,0:28:81.28:0,81,2075	0/0:18,0:18:48.15:0,48,1197	0/0:23,0:23:60.21:0,60,1519	0/0:14,0:14:30.08:0,30,610	0/0:34,0:34:87.29:0,87,2282	0/0:26,0:26:63.22:0,63,1660	0/0:8,0:8:24.08:0,24,602
chr10	50704311	.	G	GCTGAGTGAA	38608.88	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-9.653;DP=658;FS=1.416;HRun=0;HaplotypeScore=150.5010;InbreedingCoeff=0.9963;MQ=78.26;MQ0=0;MQRankSum=-18.727;QD=91.06;ReadPosRankSum=-0.733;VQSLOD=5.1500;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,33:47:92.71:3381,93,0	1/1:2,5:9:15.05:732,15,0	0/0:27,0:27:65.40:0,65,1917	0/0:18,0:19:44.33:0,44,1347	0/0:26,0:26:75.26:0,75,2327	1/1:4,13:19:36.05:1474,36,0	1/1:8,10:27:51.18:2386,51,0	1/1:12,11:28:75.24:3053,75,0	1/1:5,16:27:57.15:2648,57,0	0/0:19,0:18:57.19:0,57,1703	0/0:19,0:19:48.16:0,48,1489	1/1:4,19:27:51.18:2491,51,0	1/1:3,18:22:60.21:2919,60,0	0/0:21,0:21:57.20:0,57,1747	1/1:6,25:41:90.09:3751,90,0	1/1:7,18:27:60.21:2930,60,0	0/0:30,0:30:90.27:0,90,2518	0/0:25,0:25:75.22:0,75,2252	1/1:8,7:20:57.12:2065,57,0	1/1:4,21:31:68.99:2838,69,0	1/1:3,10:19:26.94:860,27,0	1/1:2,7:14:23.93:854,24,0	1/1:4,12:23:30.02:1189,30,0	1/1:3,7:11:23.81:966,24,0	0/0:19,0:19:57.20:0,57,1729	0/0:22,0:22:66.22:0,66,1936	1/1:7,22:32:84.29:4072,84,0	0/0:7,0:7:21.07:0,21,652
chr10	50707146	.	C	CT	4132.25	PASS	AB=0.863;AC=21;AF=0.375;AN=56;BaseQRankSum=-8.494;DP=601;FS=3.867;HRun=10;HaplotypeScore=63.9786;InbreedingCoeff=0.7759;MQ=78.88;MQ0=0;MQRankSum=-1.325;QD=16.14;ReadPosRankSum=1.544;VQSLOD=4.1580;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,33:39:44.53:679,45,0	0/0:10,0:10:23.96:0,24,197	0/1:26,0:26:11.18:11,0,116	0/1:12,0:12:19.69:20,0,61	0/0:31,0:31:74.83:0,75,605	1/1:1,17:18:42.11:447,42,0	1/1:6,18:24:42.11:448,42,0	0/0:30,0:31:49.89:0,50,397	0/1:6,9:15:3.58:171,0,4	0/0:20,0:20:47.77:0,48,380	0/0:29,0:29:63.90:0,64,533	1/1:7,16:23:36.09:384,36,0	1/1:4,11:15:27.07:288,27,0	0/0:21,0:21:47.92:0,48,391	0/0:17,0:17:38.93:0,39,320	1/1:2,21:24:56.98:590,57,0	0/0:29,0:29:68.89:0,69,566	0/0:27,0:27:65.86:0,66,534	0/0:20,0:21:40.93:0,41,321	0/0:17,0:17:41.95:0,42,345	0/0:14,1:16:12:0,12,294	1/1:6,13:19:11.45:328,11,0	1/1:1,14:15:26.98:272,27,0	1/1:6,18:24:7.86:495,8,0	0/0:21,0:23:58.90:0,59,467	0/0:22,0:22:41.92:0,42,345	0/0:23,0:23:56.91:0,57,464	0/0:8,0:8:11.98:0,12,99
chr10	50707888	.	T	TC	12635.04	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-16.178;DP=823;FS=4.359;HRun=1;HaplotypeScore=95.1910;InbreedingCoeff=0.9998;MQ=77.29;MQ0=0;MQRankSum=-2.815;QD=39.98;ReadPosRankSum=3.007;VQSLOD=5.3027;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,40:40:99:1606,108,0	0/0:14,0:14:39.08:0,39,487	0/0:19,0:19:54.16:0,54,665	0/0:23,0:23:47.71:0,48,567	0/0:22,0:22:66.18:0,66,827	1/1:1,26:27:72.24:1078,72,0	1/1:4,29:33:78.26:1167,78,0	0/0:33,0:33:90.24:0,90,1138	1/1:0,28:29:78.26:1156,78,0	0/0:25,0:25:75.24:0,75,972	0/0:12,0:12:33.11:0,33,427	1/1:2,45:47:99:1923,129,0	1/1:2,27:29:78.26:1167,78,0	0/0:41,0:41:99:0,120,1557	0/0:41,0:40:99:0,117,1517	1/1:1,43:44:99:1708,114,0	0/0:44,0:44:99:0,126,1633	0/0:28,0:28:84.27:0,84,1089	0/0:22,0:22:30.24:0,30,672	0/0:32,0:32:90.29:0,90,1160	0/0:68,0:68:99:0,205,2647	1/1:0,20:20:57.19:853,57,0	1/1:0,15:15:39.13:583,39,0	1/1:0,31:31:93.32:1393,93,0	0/0:13,0:13:39.13:0,39,506	0/0:23,0:23:69.22:0,69,896	0/0:32,0:31:93.30:0,93,1203	0/0:15,0:15:39.13:0,39,506
chr10	50708232	.	AT	A	10896.56	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=14.857;DP=791;FS=5.496;HRun=1;HaplotypeScore=76.5644;InbreedingCoeff=0.9997;MQ=93.79;MQ0=0;MQRankSum=-9.045;QD=38.10;ReadPosRankSum=5.108;VQSLOD=5.3370;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,44:44:99:1677,120,0	0/0:13,0:13:39.12:0,39,600	0/0:37,0:37:99:0,108,1556	0/0:33,0:33:82.60:0,83,1359	0/0:29,0:29:87.27:0,87,1337	1/1:0,27:27:81.27:1132,81,0	1/1:0,27:27:57.19:796,57,0	0/0:28,0:28:81.25:0,81,1230	1/1:0,26:26:72.24:1007,72,0	0/0:34,0:34:99:0,102,1602	0/0:20,0:20:57.17:0,57,866	1/1:0,28:28:75.25:1049,75,0	1/1:0,38:38:99:1419,105,0	0/0:26,1:27:39.31:0,39,1179	0/0:27,0:27:81.26:0,81,1271	1/1:0,28:28:78.26:1090,78,0	0/0:37,0:37:99:0,108,1676	0/0:23,0:23:69.15:0,69,1047	0/0:30,0:29:90.31:0,90,1437	0/0:28,0:28:84.29:0,84,1342	0/0:39,0:39:99:0,114,1821	1/1:0,27:27:78.26:1090,78,0	1/1:0,15:15:39.12:545,39,0	1/1:0,26:26:78.26:1090,78,0	0/0:34,0:34:99:0,99,1552	0/0:35,0:34:99:0,105,1678	0/0:23,0:23:69.22:0,69,1079	0/0:8,0:8:24.06:0,24,359
chr10	50708533	.	CT	C	8978.18	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=13.583;DP=669;FS=6.828;HRun=1;HaplotypeScore=65.1278;InbreedingCoeff=0.9982;MQ=77.98;MQ0=0;MQRankSum=-1.243;QD=36.20;ReadPosRankSum=4.635;VQSLOD=4.9527;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,39:39:99:1425,102,0	0/0:14,0:13:42.14:0,42,659	0/0:24,0:24:42.43:0,42,638	0/0:7,0:7:20.96:0,21,205	0/0:28,0:28:81.26:0,81,1270	1/1:0,18:18:45.15:629,45,0	1/1:0,21:21:60.20:839,60,0	0/0:28,0:28:84.28:0,84,1320	1/1:0,23:23:66.22:922,66,0	0/0:40,0:39:99:0,120,1813	0/0:21,0:21:63.20:0,63,975	1/1:0,26:26:69.23:964,69,0	1/1:1,20:21:51.01:699,51,0	0/0:22,0:22:66.22:0,66,1051	0/0:34,0:34:99:0,102,1579	1/1:0,33:33:78.26:1090,78,0	0/0:28,0:28:84.27:0,84,1314	0/0:18,0:18:51.17:0,51,801	0/0:19,0:19:57.18:0,57,869	0/0:27,0:27:81.24:0,81,1230	0/0:14,0:14:42.13:0,42,642	1/1:0,28:28:72.20:983,72,0	1/1:0,18:18:51.17:713,51,0	1/1:0,21:21:51.17:713,51,0	0/0:23,0:23:69.24:0,69,1100	0/0:29,0:29:87.30:0,87,1390	0/0:39,0:38:99:0,117,1868	0/0:6,0:6:18.06:0,18,287
chr10	50708976	.	G	GACT	7543.91	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-13.611;DP=703;FS=3.131;HRun=0;HaplotypeScore=95.8167;InbreedingCoeff=0.9995;MQ=82.66;MQ0=0;MQRankSum=-2.920;QD=49.96;ReadPosRankSum=-3.253;VQSLOD=6.1851;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,120,1936	0/0:12,0:12:36.01:0,36,536	0/0:21,0:21:48.19:0,48,754	0/0:27,0:27:57.48:0,57,873	0/0:30,0:30:78.24:0,78,1247	0/0:25,0:25:75.24:0,75,1224	0/0:22,0:22:63.13:0,63,941	1/1:1,41:45:99:2646,132,0	0/0:19,0:19:57.19:0,57,945	0/0:24,0:24:66.20:0,66,1070	0/0:16,0:16:42.14:0,42,699	0/0:20,0:20:57.19:0,57,945	0/0:41,0:41:99:0,120,1944	0/0:21,0:21:54.17:0,54,875	0/0:29,0:29:87.30:0,87,1446	0/0:29,0:29:81.21:0,81,1268	0/0:29,0:29:87.28:0,87,1422	0/0:20,0:20:54.17:0,54,873	1/1:3,19:22:63.19:1285,63,0	1/1:1,28:30:72.12:1473,72,0	1/1:1,28:30:59.89:1191,60,0	0/0:27,0:27:69.23:0,69,1120	0/0:20,0:20:57.19:0,57,947	0/0:28,0:28:75.24:0,75,1223	0/0:18,0:18:45.15:0,45,722	0/0:26,0:26:69.24:0,69,1149	1/1:3,19:24:41.69:949,42,0	0/0:8,0:8:24.07:0,24,374
chr10	50709711	.	AAATAAAGAC	A	15525.18	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=17.611;DP=658;FS=1.038;HRun=0;HaplotypeScore=202.2228;InbreedingCoeff=0.9993;MQ=80.39;MQ0=0;MQRankSum=-18.826;QD=66.35;ReadPosRankSum=1.938;VQSLOD=4.4396;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,21:28:51.17:1434,51,0	0/0:9,0:9:21.07:0,21,1015	0/0:21,0:21:57.19:0,57,2041	0/0:22,0:22:62.87:0,63,2529	0/0:24,0:24:69.24:0,69,3160	1/1:3,26:29:66.23:1967,66,0	1/1:5,16:21:45.15:1329,45,0	0/0:37,0:37:99:0,99,4666	1/1:5,18:23:51.18:1545,51,0	0/0:35,0:35:99:0,99,4384	0/0:24,0:24:66.17:0,66,3114	1/1:4,20:24:54.19:1603,54,0	1/1:1,26:27:72.21:1997,72,0	0/0:36,0:36:99:0,102,4773	0/0:25,0:25:66.23:0,66,3098	1/1:3,24:27:66.23:1970,66,0	0/0:15,0:15:45.15:0,45,2175	0/0:16,0:16:48.16:0,48,2225	0/0:23,0:23:66.23:0,66,2813	0/0:29,0:29:84.26:0,84,3685	0/0:12,0:12:36.12:0,36,1658	1/1:2,19:21:57.20:1600,57,0	1/1:1,15:16:42.14:1133,42,0	1/1:3,15:18:33.11:947,33,0	0/0:21,0:21:57.20:0,57,2716	0/0:37,0:37:99:0,105,4937	0/0:25,0:25:72.23:0,72,2982	0/0:13,0:13:39.13:0,39,1885
chr10	50710020	.	AT	A	3573.67	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=11.303;DP=549;FS=5.057;HRun=10;HaplotypeScore=61.7035;InbreedingCoeff=0.9926;MQ=76.36;MQ0=3;MQRankSum=2.158;QD=19.64;ReadPosRankSum=3.245;VQSLOD=4.7686;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,33:38:88.76:761,89,0	0/0:12,0:12:30.08:0,30,332	0/0:31,0:23:21.73:0,22,306	0/0:21,0:14:20.22:0,20,186	0/0:26,0:26:60.77:0,61,659	1/1:1,14:15:35.99:313,36,0	1/1:0,14:14:32.99:287,33,0	0/0:25,1:26:33.76:0,34,569	1/1:4,9:13:31.21:258,31,0	0/0:20,0:20:57.14:0,57,621	0/0:24,0:25:63:0,63,678	1/1:4,15:19:16.64:290,17,0	1/1:2,13:15:35.99:312,36,0	0/0:19,0:19:51.12:0,51,555	0/0:16,0:16:42.08:0,42,447	1/1:1,19:20:41.99:365,42,0	0/0:29,1:30:55.17:0,55,833	0/0:6,0:6:15.04:0,15,166	0/0:23,0:23:31.23:0,31,570	0/0:26,0:26:72.19:0,72,789	0/0:7,0:7:18.05:0,18,199	1/1:2,16:18:44.98:390,45,0	1/1:1,18:19:47.89:417,48,0	1/1:2,9:11:20.99:182,21,0	0/0:14,0:14:39.10:0,39,428	0/0:23,1:24:43.13:0,43,704	0/0:20,0:20:57.15:0,57,631	0/0:20,0:20:54.15:0,54,597
chr10	50710337	.	GT	G	3999.60	PASS	AB=0.882;AC=22;AF=0.393;AN=56;BaseQRankSum=13.239;DP=590;FS=5.975;HRun=10;HaplotypeScore=56.5688;InbreedingCoeff=0.8144;MQ=67.55;MQ0=0;MQRankSum=-0.453;QD=17.09;ReadPosRankSum=3.022;VQSLOD=4.3062;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,24:25:65.99:573,66,0	0/0:21,0:21:51.14:0,51,564	0/0:8,0:8:11.06:0,11,106	0/1:5,0:6:27.02:27,0,82	0/0:34,0:34:81.22:0,81,896	1/1:1,22:23:56.98:495,57,0	1/1:4,15:19:35.98:313,36,0	0/0:38,0:38:96.23:0,96,1039	1/1:3,18:21:31.24:397,31,0	0/0:18,0:18:48.12:0,48,525	0/0:28,0:28:78.20:0,78,862	1/1:1,13:15:38.03:319,38,0	1/1:1,15:16:32.99:287,33,0	0/0:17,0:17:50.94:0,51,528	0/0:18,1:18:31.09:0,31,561	1/1:2,23:25:59.99:521,60,0	0/1:25,3:28:16.93:17,0,663	0/0:18,0:18:42.11:0,42,464	0/0:31,0:31:81.22:0,81,896	0/0:22,1:24:40:0,40,645	0/0:9,2:11:1.02:0,1,239	1/1:3,17:21:31.90:402,32,0	1/1:1,19:20:47.99:417,48,0	1/1:2,12:14:26.99:234,27,0	0/0:20,0:21:56.99:0,57,612	0/0:30,0:30:58.21:0,58,870	0/0:24,0:24:57.13:0,57,620	0/0:14,0:14:33.09:0,33,365
chr10	50710801	.	T	TTTCAGTTACCAATAGTCA	48186.96	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=2.546;DP=733;FS=11.411;HRun=0;HaplotypeScore=325.1533;InbreedingCoeff=0.9995;MQ=71.61;MQ0=0;MQRankSum=-20.468;QD=186.05;ReadPosRankSum=1.593;VQSLOD=4.1224;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:17,4:21:57.20:3343,57,0	0/0:15,0:15:39.12:0,39,1739	0/0:18,0:18:48.16:0,48,1934	0/0:15,0:15:36.12:0,36,1326	0/0:39,0:39:99:0,114,5052	1/1:19,13:36:93.32:6725,93,0	1/1:17,6:25:57.19:3683,57,0	0/0:31,0:31:78.26:0,78,2894	1/1:16,10:27:75.26:5500,75,0	0/0:36,0:36:99:0,102,4590	0/0:30,0:30:87.28:0,87,4020	1/1:13,8:21:63.22:4518,63,0	1/1:21,12:34:96.33:6937,96,0	0/0:29,0:29:81.28:0,81,3816	0/0:25,0:25:72.25:0,72,3278	1/1:19,12:33:87.30:6564,87,0	0/0:38,0:38:99:0,111,5220	0/0:18,0:18:51.14:0,51,2335	0/0:23,0:23:63.22:0,63,2496	0/0:44,0:44:99:0,126,5781	0/0:8,0:8:24.06:0,24,1002	1/1:19,5:28:78.27:5071,78,0	1/1:10,8:21:51.17:3616,51,0	1/1:6,6:13:27.09:2230,27,0	0/0:35,0:35:99:0,102,4690	0/0:29,0:29:75.26:0,75,3684	0/0:28,0:27:84.29:0,84,3993	0/0:13,0:13:33.11:0,33,1532
chr10	50711175	.	GA	G	8072.20	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=19.732;DP=675;FS=2.537;HRun=2;HaplotypeScore=101.5658;InbreedingCoeff=0.9990;MQ=85.31;MQ0=0;MQRankSum=-8.248;QD=33.63;ReadPosRankSum=2.571;VQSLOD=4.8696;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,23:23:57.19:740,57,0	0/0:11,0:11:33.10:0,33,476	0/0:20,0:20:60.18:0,60,866	0/0:25,0:25:48.99:0,49,839	0/0:29,0:29:87.29:0,87,1300	1/1:2,27:29:78.21:993,78,0	1/1:1,22:23:60.20:778,60,0	0/0:30,0:30:87.29:0,87,1286	1/1:2,24:26:66.13:818,66,0	0/0:29,0:29:87.28:0,87,1266	0/0:23,0:23:69.21:0,69,997	1/1:3,31:34:87.15:1071,87,0	1/1:0,33:33:96.27:1222,96,0	0/0:28,0:28:84.25:0,84,1200	0/0:22,0:22:66.22:0,66,970	1/1:0,31:31:90.21:1130,90,0	0/0:18,0:18:54.14:0,54,765	0/0:27,0:27:81.24:0,81,1188	0/0:15,0:15:45.15:0,45,674	0/0:36,0:36:99:0,105,1552	0/0:23,0:23:69.21:0,69,994	1/1:0,13:13:33.11:427,33,0	1/1:1,17:18:45.15:583,45,0	1/1:0,10:10:24.08:311,24,0	0/0:27,0:27:81.27:0,81,1214	0/0:27,0:27:81.26:0,81,1180	0/0:38,0:36:99:0,108,1557	0/0:7,0:7:21.07:0,21,315
chr10	50711962	.	GAAA	G	6191.75	PASS	AB=0.581;AC=21;AF=0.375;AN=56;BaseQRankSum=2.325;DP=592;FS=2.787;HRun=11;HaplotypeScore=111.2161;InbreedingCoeff=0.9114;MQ=71.88;MQ0=0;MQRankSum=-5.652;QD=27.16;ReadPosRankSum=5.972;VQSLOD=3.7739;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,22:24:60.18:788,60,0	0/0:0,0:9:25.15:0,25,187	0/0:12,0:12:27.05:0,27,381	0/0:18,0:18:20.52:0,21,365	0/0:35,0:37:93.30:0,93,1765	1/1:2,19:21:48.15:631,48,0	1/1:5,12:17:33.08:434,33,0	0/0:6,0:36:37.02:0,37,80	1/1:1,18:19:39.11:509,39,0	0/0:27,0:28:66.19:0,66,1248	0/0:19,0:19:48.16:0,48,936	1/1:1,16:17:45.14:587,45,0	1/1:1,18:20:46.71:628,47,0	0/0:19,0:20:54.16:0,54,1045	0/0:3,0:13:29.90:0,30,234	1/1:6,22:28:63.17:828,63,0	0/0:20,0:20:57.15:0,57,1111	0/0:18,0:18:45.15:0,45,859	0/1:5,1:18:17.04:17,0,44	0/0:1,0:31:37.38:0,37,81	0/0:1,0:8:7.48:0,7,16	1/1:3,18:22:52.71:707,53,0	1/1:2,22:24:50.57:670,51,0	1/1:3,15:18:30.07:394,30,0	0/0:25,0:27:64.44:0,64,1238	0/0:29,0:29:72.25:0,72,1402	0/0:8,0:28:16.95:0,17,41	0/0:9,0:9:27.09:0,27,529
chr10	50712084	.	A	AGGAACCATTTTGGTTATTC	45121.13	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=-2.324;DP=693;FS=7.991;HRun=0;HaplotypeScore=284.6812;InbreedingCoeff=0.9223;MQ=78.08;MQ0=0;MQRankSum=-19.274;QD=130.03;ReadPosRankSum=2.599;VQSLOD=3.5561;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,7:25:27.09:2229,27,0	0/0:10,0:10:30.10:0,30,1423	0/0:20,0:20:54.16:0,54,2188	0/0:22,0:22:39.05:0,39,2061	0/0:20,0:20:60.19:0,60,3123	1/1:11,13:33:72.25:5322,72,0	1/1:9,4:26:42.14:3019,42,0	0/0:33,0:33:96.31:0,96,3929	1/1:9,16:36:75.26:5807,75,0	0/0:24,0:24:69.24:0,69,3419	0/0:17,0:17:48.16:0,48,2502	1/1:12,14:35:66.23:5464,66,0	1/1:9,12:30:62.85:4811,63,0	0/0:23,0:23:66.21:0,66,3364	0/0:33,0:33:99:0,99,4900	1/1:14,14:40:84.29:6271,84,0	0/0:18,0:18:51.17:0,51,2537	0/0:16,0:16:48.13:0,48,2356	0/0:23,0:23:66.20:0,66,2953	0/1:36,0:36:99:172,0,4834	0/0:22,0:22:66.15:0,66,2963	1/1:11,11:28:63.22:4721,63,0	1/1:16,11:36:72.72:5231,73,0	1/1:6,6:22:30.10:2074,30,0	0/0:21,0:21:57.18:0,57,2853	0/0:20,0:20:60.20:0,60,2768	0/0:18,0:18:54.19:0,54,2656	0/0:6,0:6:18.06:0,18,934
chr10	50712488	.	T	TGA	16295.29	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-16.294;DP=629;FS=1.346;HRun=0;HaplotypeScore=68.0834;InbreedingCoeff=0.9992;MQ=76.88;MQ0=2;MQRankSum=0.210;QD=45.26;ReadPosRankSum=-0.385;VQSLOD=6.0548;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,35:41:99:1995,114,0	0/0:9,0:9:21.07:0,21,289	0/0:14,0:14:36.12:0,36,470	0/0:14,0:14:27.09:0,27,362	0/0:24,0:24:69.23:0,69,948	1/1:0,20:20:54.19:958,54,0	1/1:1,27:29:63.22:1118,63,0	1/1:4,27:31:78.26:1357,78,0	1/1:0,18:19:51.17:905,51,0	0/0:21,0:21:57.18:0,57,771	0/0:19,0:19:57.18:0,57,767	1/1:1,10:11:30.10:532,30,0	1/1:3,22:25:63.22:1118,63,0	0/0:18,0:18:48.16:0,48,659	0/0:21,0:21:63.21:0,63,865	1/1:1,21:23:60.21:1064,60,0	0/0:38,0:38:99:0,111,1523	0/0:18,0:18:54.18:0,54,739	1/1:2,22:26:72.20:1181,72,0	1/1:1,16:18:45.15:799,45,0	1/1:6,26:32:72.25:1278,72,0	1/1:0,20:20:48.16:852,48,0	1/1:0,21:21:63.22:1117,63,0	1/1:2,13:15:39.13:692,39,0	0/0:32,0:32:81.27:0,81,1113	0/0:30,0:30:90.29:0,90,1220	1/1:0,26:26:75.26:1328,75,0	0/0:11,0:11:33.11:0,33,453
chr10	50712590	.	GA	G	4590.14	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=1.611;DP=582;FS=0.000;HRun=9;HaplotypeScore=71.7054;InbreedingCoeff=0.9958;MQ=77.07;MQ0=0;MQRankSum=-0.799;QD=24.16;ReadPosRankSum=3.966;VQSLOD=5.3814;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,36:38:99:934,102,0	0/0:2,0:8:19.89:0,20,101	0/0:20,0:20:36.01:0,36,375	0/0:9,0:9:14.97:0,15,152	0/0:27,0:27:72.20:0,72,823	1/1:0,21:21:57.03:522,57,0	1/1:2,16:19:47.06:418,47,0	0/0:6,0:45:99:0,107,580	1/1:0,9:9:27.01:247,27,0	0/0:26,0:26:63.18:0,63,718	0/0:17,0:17:36.11:0,36,415	1/1:1,23:24:57.03:522,57,0	1/1:0,24:24:72.04:658,72,0	0/0:22,0:22:63.19:0,63,726	0/0:5,0:17:44:0,44,252	1/1:1,12:13:33.01:302,33,0	0/0:26,0:25:78.21:0,78,881	0/0:11,0:11:30.05:0,30,325	0/0:7,0:24:51.04:0,51,257	0/0:1,0:11:25.31:0,25,129	0/0:6,0:17:28.41:0,28,144	1/1:1,8:9:24.01:220,24,0	1/1:3,15:18:42.02:384,42,0	1/1:1,14:15:42.02:384,42,0	0/0:18,0:18:42.12:0,42,485	0/0:35,0:35:96.27:0,96,1092	0/0:12,0:36:73.89:0,74,383	0/0:23,0:23:69.20:0,69,794
chr10	50712961	.	TTTGC	T	1491.35	PASS	AB=1.000;AC=10;AF=0.185;AN=54;BaseQRankSum=-0.028;DP=264;FS=16.295;HRun=0;HaplotypeScore=50.2876;InbreedingCoeff=0.6603;MQ=58.17;MQ0=5;MQRankSum=3.606;QD=18.88;ReadPosRankSum=0.121;VQSLOD=1.1683;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:7.13:0,7,212	0/0:3,0:3:9.03:0,9,130	0/0:17,0:7:20.73:0,21,353	0/0:22,0:9:21.07:0,21,386	0/0:6,0:6:18.06:0,18,323	0/0:7,0:7:17.98:0,18,163	0/1:5,0:5:18.03:18,0,47	1/1:18,27:44:75.21:1084,75,0	0/0:4,0:4:8.85:0,9,73	0/0:4,0:4:12.04:0,12,223	0/0:5,0:5:12.04:0,12,200	0/0:7,0:7:21.04:0,21,213	0/0:7,0:7:15.02:0,15,148	0/0:8,0:8:21.07:0,21,342	0/0:8,0:8:18.06:0,18,288	0/1:5,0:5:4.29:4,0,72	0/0:28,0:27:60.21:0,60,1155	0/0:9,0:9:24.04:0,24,453	1/1:12,0:10:15.90:210,16,0	1/1:1,6:7:12.04:145,12,0	./.	0/0:2,0:2:6.01:0,6,58	0/0:9,0:9:27.03:0,27,250	0/0:7,0:7:18.03:0,18,185	0/0:10,0:10:24.08:0,24,451	0/0:7,0:7:21.07:0,21,384	1/1:5,0:5:12.51:187,13,0	0/0:4,0:4:6:0,6,97
chr10	50713964	.	TAA	T	5806.24	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=13.051;DP=678;FS=0.362;HRun=2;HaplotypeScore=79.5307;InbreedingCoeff=0.9980;MQ=81.90;MQ0=0;MQRankSum=-1.884;QD=45.01;ReadPosRankSum=-1.068;VQSLOD=4.3649;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,147,2935	0/0:14,0:14:42.13:0,42,817	0/0:20,0:20:60.20:0,60,1099	0/0:15,0:15:42.11:0,42,772	0/0:25,0:25:75.26:0,75,1502	0/0:27,0:27:81.28:0,81,1646	0/0:14,0:14:42.14:0,42,854	1/1:0,30:30:90.27:1387,90,0	0/0:29,0:29:87.30:0,87,1758	0/0:30,0:30:90.30:0,90,1790	0/0:15,0:15:45.15:0,45,915	0/0:25,0:25:75.26:0,75,1521	0/0:32,0:32:96.33:0,96,1951	0/0:25,0:25:75.26:0,75,1515	0/0:25,0:25:75.26:0,75,1524	0/0:27,0:27:81.26:0,81,1592	0/0:27,0:27:81.28:0,81,1634	0/0:19,0:19:54.19:0,54,1097	1/1:0,10:10:30.08:462,30,0	1/1:0,32:32:93.32:1514,93,0	1/1:0,20:20:48.16:782,48,0	0/0:27,0:27:81.28:0,81,1622	0/0:22,0:22:66.23:0,66,1338	0/0:16,0:16:48.16:0,48,966	0/0:32,0:32:96.32:0,96,1905	0/0:28,0:28:81.28:0,81,1641	1/1:0,37:37:99:1661,102,0	0/0:6,0:6:18.06:0,18,366
chr10	50714822	.	G	GCA	1922.16	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-8.169;DP=753;FS=11.414;HRun=0;HaplotypeScore=94.0753;InbreedingCoeff=0.9975;MQ=68.42;MQ0=0;MQRankSum=-0.331;QD=36.96;ReadPosRankSum=1.168;VQSLOD=5.3393;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:31.39:0,31,935	1/1:1,12:14:33.11:548,33,0	0/0:31,0:24:45.11:0,45,539	0/0:35,0:34:68.78:0,69,788	0/0:19,0:19:51.16:0,51,643	0/0:20,0:20:51.16:0,51,644	0/0:18,0:18:42.12:0,42,515	0/0:34,0:34:78.22:0,78,940	0/0:32,0:32:90.27:0,90,1122	0/0:32,0:32:93.29:0,93,1164	0/0:18,0:19:47.98:0,48,582	0/0:33,0:33:81.26:0,81,1022	0/0:32,0:32:78.25:0,78,984	0/0:30,0:30:87.28:0,87,1098	1/1:6,31:38:90.31:1495,90,0	0/0:25,0:25:72.23:0,72,909	0/0:35,0:35:90.29:0,90,1136	0/0:30,0:30:75.22:0,75,932	0/0:22,0:22:51.12:0,51,625	0/0:24,0:24:66.03:0,66,796	0/0:16,0:17:41.97:0,42,506	0/0:24,0:24:60.18:0,60,744	0/0:20,0:20:53.45:0,53,680	0/0:38,0:39:99:0,99,1226	0/0:26,0:26:75.24:0,75,947	0/0:37,0:37:99:0,99,1238	0/0:25,0:25:69.22:0,69,871	0/0:7,0:7:21.07:0,21,265
chr10	50721306	.	T	TA	4914.65	PASS	AB=0.651;AC=19;AF=0.339;AN=56;BaseQRankSum=-10.709;DP=605;FS=5.408;HRun=10;HaplotypeScore=61.9133;InbreedingCoeff=0.7570;MQ=80.22;MQ0=0;MQRankSum=-0.733;QD=18.62;ReadPosRankSum=-0.056;VQSLOD=5.3974;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:5,18:23:22.52:397,0,23	0/0:9,0:9:26.97:0,27,222	0/0:19,0:20:20.59:0,21,193	0/0:10,0:11:11.53:0,12,91	0/0:20,0:20:50.93:0,51,418	1/1:2,23:26:59.98:622,60,0	0/1:2,20:22:13.20:284,0,13	0/1:28,5:33:65.11:65,0,255	1/1:3,19:23:29.33:502,29,0	0/0:18,0:20:33.63:0,34,251	0/0:19,0:19:46.99:0,47,386	1/1:5,15:21:20.31:405,20,0	1/1:6,18:25:51:515,51,0	0/0:21,0:21:56.89:0,57,465	0/0:27,1:28:36.90:0,37,510	1/1:3,22:25:38.52:615,39,0	0/0:18,0:18:37.32:0,37,356	0/0:21,0:21:50.89:0,51,415	0/0:20,1:21:21.92:0,22,382	0/0:22,0:22:28.89:0,29,391	0/0:12,0:12:23.96:0,24,197	1/1:3,24:27:19.79:596,20,0	1/1:4,18:24:54.09:562,54,0	1/1:2,13:15:33.08:352,33,0	0/0:20,0:21:53.87:0,54,440	0/0:29,0:29:67.93:0,68,545	0/0:31,1:34:52.98:0,53,620	0/0:15,0:15:44.95:0,45,369
chr10	50722348	.	TAGA	T	1470.56	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.530;DP=781;FS=2.484;HRun=0;HaplotypeScore=107.0697;InbreedingCoeff=0.9703;MQ=89.92;MQ0=0;MQRankSum=-3.572;QD=47.44;ReadPosRankSum=1.576;VQSLOD=5.9226;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,163,3962	0/0:17,0:16:51.18:0,51,1257	0/0:30,0:30:84.27:0,84,1842	0/0:29,0:29:84.29:0,84,1907	0/0:28,0:28:81.28:0,81,1991	0/0:22,0:22:66.21:0,66,1570	0/0:27,0:27:81.28:0,81,1992	0/0:39,0:39:99:0,117,2835	0/0:28,0:28:84.29:0,84,2035	0/0:28,0:28:81.28:0,81,1971	0/0:21,0:21:60.21:0,60,1450	0/0:31,0:31:93.30:0,93,2186	0/0:32,0:32:96.32:0,96,2286	0/0:35,0:35:99:0,105,2520	0/0:37,0:37:99:0,111,2668	1/1:0,31:31:84.29:1565,84,0	0/0:33,0:33:99:0,99,2403	0/0:18,0:18:54.19:0,54,1331	0/0:30,0:30:90.29:0,90,2111	0/0:24,0:24:72.25:0,72,1774	0/0:23,0:23:66.19:0,66,1540	0/0:23,0:23:69.24:0,69,1615	0/0:21,0:21:60.21:0,60,1476	0/0:24,0:24:72.23:0,72,1689	0/0:37,0:37:99:0,111,2708	0/0:33,0:33:99:0,99,2395	0/0:21,0:21:63.22:0,63,1550	0/0:4,0:4:12.04:0,12,296
chr10	50723227	.	T	TG	3072.75	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-4.598;DP=524;FS=1.431;HRun=1;HaplotypeScore=70.9068;InbreedingCoeff=0.9450;MQ=72.32;MQ0=2;MQRankSum=1.287;QD=23.28;ReadPosRankSum=0.853;VQSLOD=3.6970;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:54.51:0,55,338	0/0:9,0:9:17.01:0,17,117	0/0:11,0:7:17.80:0,18,160	0/0:15,0:14:23.79:0,24,192	0/0:21,0:21:56.79:0,57,585	0/0:22,0:21:36.24:0,36,240	0/0:10,0:10:8.23:0,8,36	1/1:4,16:22:55.71:626,56,0	0/0:16,0:16:30.90:0,31,214	0/0:22,0:22:60.08:0,60,661	0/0:25,0:25:66.04:0,66,700	0/0:19,0:19:26.34:0,26,187	0/0:15,0:15:21.69:0,22,126	0/0:16,0:16:38.60:0,39,414	0/0:23,0:23:24.53:0,25,166	1/1:5,20:25:7.49:308,7,0	0/0:23,0:23:55.56:0,56,620	0/0:14,0:14:36.01:0,36,384	1/1:7,21:28:74.96:873,75,0	1/1:2,24:26:68.78:807,69,0	1/1:1,7:8:8.06:94,8,0	0/0:8,0:8:14.27:0,14,93	0/0:17,0:17:22.62:0,23,133	0/0:10,0:10:25.52:0,26,144	0/0:18,0:17:46.03:0,46,511	0/0:31,0:31:78.64:0,79,877	1/1:2,21:23:37.76:545,38,0	0/0:13,0:13:30.03:0,30,333
chr10	50723333	.	T	TAA	4349	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=-11.458;DP=554;FS=1.910;HRun=8;HaplotypeScore=67.5675;InbreedingCoeff=0.9438;MQ=70.52;MQ0=0;MQRankSum=1.615;QD=36.55;ReadPosRankSum=-3.266;VQSLOD=4.1096;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:96.23:0,96,1058	0/0:12,0:12:33.07:0,33,359	0/0:14,0:14:27.03:0,27,279	0/1:2,0:2:0:0,0,0	0/0:40,0:40:99:0,108,1194	0/0:18,0:18:48.11:0,48,526	0/0:16,0:16:33.05:0,33,368	1/1:4,18:23:54.17:832,54,0	0/0:15,0:15:36.07:0,36,390	0/0:31,0:31:81.19:0,81,891	0/0:23,0:23:60.12:0,60,650	0/0:9,0:9:18.04:0,18,201	0/0:17,0:17:42.10:0,42,468	0/0:22,0:22:60.15:0,60,668	0/0:21,0:21:60.14:0,60,659	0/0:25,0:25:54.73:0,55,181	0/0:21,0:21:60.16:0,60,669	0/0:11,0:11:27.07:0,27,300	1/1:7,18:25:54.18:856,54,0	1/1:1,24:28:74.66:1090,75,0	1/1:1,6:7:15.05:238,15,0	0/0:24,0:24:63.15:0,63,692	0/0:28,0:28:75.18:0,75,826	0/0:11,0:11:24.02:0,24,254	0/0:18,0:18:54.15:0,54,602	0/0:19,0:19:54.14:0,54,602	1/1:2,32:34:84.29:1333,84,0	0/0:7,0:7:8.98:0,9,100
chr10	50723341	.	A	AT	958.78	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-6.273;DP=560;FS=4.934;HRun=0;HaplotypeScore=64.9226;InbreedingCoeff=0.8368;MQ=69.66;MQ0=0;MQRankSum=-0.204;QD=35.51;ReadPosRankSum=-0.449;VQSLOD=2.8388;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,108,1411	0/0:13,0:13:39.11:0,39,511	0/0:13,0:13:30.05:0,30,348	0/0:2,0:2:2.98:0,3,21	0/0:37,0:37:99:0,111,1526	0/0:19,0:19:54.15:0,54,715	0/0:15,0:15:45.11:0,45,563	0/0:26,0:26:65.84:0,66,402	0/0:13,0:13:39.12:0,39,525	0/0:32,0:32:93.26:0,93,1211	0/0:21,0:21:63.19:0,63,856	0/0:6,0:6:18.06:0,18,250	0/0:16,0:16:48.04:0,48,626	0/0:20,0:20:60.20:0,60,835	0/0:25,0:25:72.20:0,72,936	1/1:0,27:27:72.24:1053,72,0	0/0:21,0:21:63.19:0,63,856	0/0:12,0:12:32.99:0,33,413	0/0:26,0:26:72.55:0,73,440	0/0:30,0:30:68.06:0,68,374	0/0:7,0:7:17.01:0,17,92	0/0:21,0:21:63.21:0,63,872	0/0:27,0:27:81.24:0,81,1090	0/0:11,0:11:27.03:0,27,335	0/0:18,0:18:54.18:0,54,752	0/0:18,0:18:54.18:0,54,750	0/0:36,0:36:81.80:0,82,431	0/0:11,0:11:32.97:0,33,319
chr10	50724502	.	ATGTGTGTGTG	A	3144.39	PASS	AB=0.662;AC=15;AF=0.288;AN=52;BaseQRankSum=5.621;DP=643;FS=0.717;HRun=0;HaplotypeScore=190.1466;InbreedingCoeff=0.5174;MQ=59.44;MQ0=10;MQRankSum=-7.931;QD=12.73;ReadPosRankSum=0.956;VQSLOD=2.3466;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:24,22:46:12.20:441,12,0	0/0:3,0:6:6.02:0,6,227	./.	./.	0/0:24,0:27:39.05:0,39,796	0/1:12,9:21:2.92:170,0,3	0/1:20,15:35:11.48:230,0,11	0/0:34,0:34:16.85:0,17,272	1/1:6,5:11:9.03:268,9,0	0/0:17,0:18:30.07:0,30,612	0/0:9,0:12:15.05:0,15,411	0/1:11,13:25:8.33:673,0,8	1/1:7,14:22:5.94:376,6,0	0/0:14,0:17:27.05:0,27,558	0/0:18,0:30:21.03:0,21,676	1/1:18,0:18:27.09:627,27,0	0/0:21,0:41:57.13:0,57,1387	0/0:12,0:17:42.10:0,42,1170	0/0:11,0:10:11.98:0,12,164	0/0:18,0:18:12.03:0,12,296	0/0:25,0:24:27.08:0,27,738	1/1:3,10:13:6.02:179,6,0	0/1:11,16:26:8.68:84,0,9	0/1:13,15:28:8.28:265,0,8	0/0:14,0:21:24.08:0,24,671	0/0:15,0:20:33.06:0,33,601	0/0:35,0:35:57.63:0,58,1985	0/0:7,0:10:9:0,9,161
chr10	50724505	.	TG	T	58.58	PASS	AB=0.654;AC=1;AF=0.018;AN=56;BaseQRankSum=4.866;DP=642;FS=0.000;HRun=1;HaplotypeScore=120.1263;InbreedingCoeff=0.2874;MQ=57.29;MQ0=11;MQRankSum=-3.917;QD=3.45;ReadPosRankSum=2.995;VQSLOD=0.2708;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:39.31:0,39,444	0/0:4,0:4:9.02:0,9,115	0/0:21,0:7:15.03:0,15,159	0/0:34,0:7:18.04:0,18,185	0/0:30,0:30:64.44:0,64,810	0/0:18,0:18:28.85:0,29,335	0/0:36,0:35:37.73:0,38,451	0/0:36,0:36:95.35:0,95,1154	0/0:9,0:9:14.70:0,15,159	0/0:20,0:20:46.48:0,46,531	0/0:14,0:14:29.38:0,29,304	0/0:24,0:24:36.28:0,36,378	0/0:21,0:21:22.59:0,23,240	0/0:15,1:16:41.24:0,41,433	0/0:30,0:30:51.14:0,51,638	0/1:8,9:17:4.85:133,0,5	0/0:41,0:41:76.38:0,76,721	0/0:19,0:19:46.24:0,46,446	0/0:12,0:11:25.85:0,26,309	0/0:18,0:18:36.12:0,36,487	0/0:26,0:25:51.12:0,51,670	0/0:13,0:13:7.79:0,8,81	0/0:26,0:25:27.97:0,28,346	0/0:28,0:28:23.72:0,24,274	0/0:22,0:22:44.72:0,45,493	0/0:22,0:22:54.16:0,54,555	0/0:31,0:31:88.42:0,88,1141	0/0:10,0:10:23.10:0,23,273
chr10	50724507	.	TGTGTGTGTGTGTGTGTGTGTGTG	T	1384.78	PASS	AB=0.640;AC=1;AF=0.018;AN=56;BaseQRankSum=5.208;DP=643;FS=7.807;HRun=0;HaplotypeScore=315.5585;InbreedingCoeff=-0.0040;MQ=56.24;MQ0=13;MQRankSum=-4.908;QD=86.55;ReadPosRankSum=0.849;VQSLOD=2.2030;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:48.02:0,48,1691	0/0:4,0:4:9.03:0,9,576	0/0:23,0:7:15.03:0,15,394	0/0:35,0:7:18.04:0,18,226	0/0:30,0:30:75.26:0,75,4804	0/0:17,0:17:30.10:0,30,1030	0/0:36,0:35:40.42:0,40,1296	0/0:35,0:34:99:0,99,3321	0/0:9,0:9:21.07:0,21,644	0/0:20,0:20:57.18:0,57,3946	0/0:14,0:14:36.12:0,36,2186	0/0:23,0:23:50.98:0,51,1662	0/0:21,0:21:32.98:0,33,1332	0/0:15,0:15:42.14:0,42,2496	0/0:30,0:30:51.17:0,51,2695	0/1:7,8:16:19.36:1459,0,19	0/0:41,0:41:93.30:0,93,5847	0/0:19,0:19:57.15:0,57,4269	0/0:13,0:12:36.12:0,36,1849	0/0:19,0:19:36.12:0,36,1696	0/0:27,0:26:63.69:0,64,4242	0/0:13,0:13:12.04:0,12,326	0/0:26,0:25:29.41:0,29,665	0/0:28,0:28:30.05:0,30,1222	0/0:22,0:22:54.18:0,54,2854	0/0:22,0:22:65.96:0,66,3959	0/0:32,0:32:93.32:0,93,6151	0/0:9,0:9:21.07:0,21,866
chr10	50724544	.	GTA	G	1360.81	PASS	AB=0.981;AC=14;AF=0.259;AN=54;BaseQRankSum=0.988;DP=607;FS=13.522;HRun=0;HaplotypeScore=125.8918;InbreedingCoeff=0.3042;MQ=66.89;MQ0=8;MQRankSum=-2.086;QD=6.70;ReadPosRankSum=-0.221;VQSLOD=2.6594;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:52.65:0,53,438	0/0:7,0:7:21:0,21,210	0/0:33,0:20:49.40:0,49,536	0/0:29,0:19:53.83:0,54,485	0/0:21,0:21:38.38:0,38,294	0/0:21,0:21:31.60:0,32,223	0/0:29,0:28:23.33:0,23,195	1/1:24,0:23:64.10:535,64,0	0/0:13,0:13:22.41:0,22,177	0/0:19,0:19:18.45:0,18,313	0/1:14,0:14:12.64:13,0,172	0/0:24,0:24:21.25:0,21,206	0/0:23,0:23:24.29:0,24,166	0/1:14,0:15:3.94:4,0,205	0/0:22,0:22:38.96:0,39,380	0/0:19,0:19:42.30:0,42,265	0/1:38,1:38:81.18:81,0,289	0/1:20,2:22:99:109,0,248	1/1:8,0:7:17.51:118,18,0	./.	1/1:25,0:26:26:306,26,0	0/0:22,0:22:30.84:0,31,249	0/0:24,0:24:25.26:0,25,201	0/0:31,0:31:32.40:0,32,238	0/1:15,0:15:10.33:10,0,168	0/1:10,0:10:1.91:2,0,118	0/1:23,1:24:48.89:344,0,49	0/1:6,0:5:0.27:0,0,39
chr10	50725868	.	GC	G	661.01	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.339;DP=604;FS=1.808;HRun=4;HaplotypeScore=59.2843;InbreedingCoeff=0.9925;MQ=86.32;MQ0=0;MQRankSum=-4.216;QD=27.54;ReadPosRankSum=0.394;VQSLOD=2.9830;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:87.27:0,87,1199	0/0:8,0:8:21.05:0,21,276	0/0:25,0:25:75.10:0,75,934	0/0:20,0:20:53.55:0,54,640	0/0:23,0:23:63.21:0,63,871	0/0:14,0:14:39.13:0,39,546	0/0:23,0:23:63.21:0,63,882	0/0:24,0:24:63.13:0,63,795	0/0:15,0:15:45.15:0,45,629	0/0:18,0:18:54.18:0,54,743	0/0:19,0:19:57.19:0,57,793	0/0:28,0:28:84.25:0,84,1138	0/0:27,0:27:78.25:0,78,1074	0/0:27,0:27:81.24:0,81,1112	0/0:26,0:26:78.26:0,78,1080	1/1:2,22:24:63.19:756,63,0	0/0:39,0:39:99:0,114,1561	0/0:32,0:32:93.22:0,93,1257	0/0:22,0:22:54.13:0,54,689	0/0:19,0:19:57.18:0,57,780	0/0:34,0:34:93.29:0,93,1266	0/0:8,0:8:24.06:0,24,317	0/0:12,0:12:33.11:0,33,461	0/0:16,0:16:48.12:0,48,650	0/0:17,0:17:48.15:0,48,656	0/0:13,0:13:36.12:0,36,504	0/0:31,0:31:93.30:0,93,1283	0/0:9,0:9:27.06:0,27,342
chr10	50726664	.	C	CA	967.46	PASS	AB=0.776;AC=16;AF=0.286;AN=56;BaseQRankSum=-4.817;DP=559;FS=5.635;HRun=15;HaplotypeScore=88.8708;InbreedingCoeff=0.2563;MQ=79.46;MQ0=1;MQRankSum=-1.394;QD=4.34;ReadPosRankSum=-2.678;VQSLOD=1.0923;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,15:23:7.14:248,7,0	0/0:2,0:7:10.17:0,10,29	0/1:17,1:15:9.11:9,0,21	0/0:15,0:15:8.53:0,9,29	0/0:12,1:24:7.23:0,7,78	0/1:6,13:21:15.13:222,0,15	1/1:0,14:14:20.98:176,21,0	0/0:33,0:33:44.80:0,45,339	1/1:7,11:18:14.91:118,15,0	0/1:20,2:22:18.22:18,0,129	0/0:17,0:20:5.83:0,6,139	1/1:6,10:16:3:26,3,0	0/1:6,9:17:3.22:68,0,3	0/0:12,0:12:17.44:0,17,107	0/0:9,0:28:41.51:0,42,129	0/0:7,0:22:26.39:0,26,75	0/0:36,0:41:73.06:0,73,423	0/0:13,4:17:7.21:0,7,154	0/0:16,0:16:23.37:0,23,171	0/0:21,0:22:35.90:0,36,245	0/0:6,0:6:8.66:0,9,54	0/0:18,0:19:22.33:0,22,131	0/1:6,11:17:13.96:106,0,14	0/1:11,17:28:72.10:116,0,72	0/0:22,0:22:19.29:0,19,123	0/1:15,2:19:3.67:4,0,80	0/0:31,0:31:20.11:0,20,283	0/1:7,0:10:20.58:24,0,21
chr10	50726679	.	A	AT	1796.59	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=1.060;DP=531;FS=6.990;HRun=1;HaplotypeScore=72.9007;InbreedingCoeff=0.8824;MQ=76.32;MQ0=1;MQRankSum=-1.101;QD=13.82;ReadPosRankSum=-2.149;VQSLOD=1.8176;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:6.84:0,7,145	0/0:6,0:6:17.78:0,18,117	0/0:17,0:14:13.26:0,13,152	0/0:12,0:10:16.93:0,17,143	0/0:24,0:24:69.20:0,69,513	0/0:23,0:23:30.46:0,30,294	0/0:15,0:15:0.41:0,0,43	1/1:38,2:40:98.89:651,99,0	0/0:15,0:15:8.49:0,8,103	0/0:18,0:18:47.90:0,48,517	0/0:18,0:18:44.65:0,45,455	0/0:14,0:14:12.19:0,12,81	0/0:16,0:16:23.47:0,23,182	0/0:11,0:11:30.04:0,30,327	0/0:26,0:26:71.11:0,71,486	0/0:21,0:21:53.14:0,53,350	0/0:38,0:38:98.80:0,99,1040	0/0:17,0:17:40.14:0,40,467	1/1:21,1:22:58.20:400,58,0	1/1:26,1:27:57.17:365,57,0	1/1:9,0:9:23.16:160,23,0	0/0:14,0:14:32.99:0,33,356	0/0:15,0:15:10.47:0,10,123	0/0:26,0:26:17.63:0,18,302	0/0:13,0:13:36.03:0,36,373	0/0:13,0:13:33.81:0,34,328	1/1:30,1:32:66.09:393,66,0	0/0:8,0:8:16.97:0,17,133
chr10	50727213	.	CA	C	4582.90	PASS	AB=0.927;AC=25;AF=0.446;AN=56;BaseQRankSum=6.020;DP=768;FS=10.234;HRun=10;HaplotypeScore=119.4983;InbreedingCoeff=0.6411;MQ=60.44;MQ0=10;MQRankSum=1.918;QD=10.76;ReadPosRankSum=2.191;VQSLOD=3.0228;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,28:32:24.76:615,25,0	0/0:8,0:8:24.06:0,24,264	0/0:42,0:14:21.03:0,21,213	0/1:45,1:18:6.74:7,0,176	0/1:32,5:37:21.78:22,0,895	1/1:6,12:18:29.99:260,30,0	1/1:8,15:23:21.51:341,22,0	0/0:33,0:31:5.55:0,6,33	1/1:2,21:23:62.99:547,63,0	0/0:33,2:34:9.51:0,10,729	0/0:29,0:29:75.19:0,75,821	1/1:5,22:28:65.02:552,65,0	1/1:4,17:21:44.85:390,45,0	0/0:14,0:14:39.11:0,39,431	0/0:18,1:20:27.94:0,28,517	0/1:19,5:24:74.81:91,0,75	0/0:29,0:29:72.18:0,72,786	0/1:16,1:18:2.73:3,0,333	0/1:28,0:24:0.89:1,0,26	1/1:35,0:34:4.23:17,4,0	0/0:18,0:17:12.30:0,12,52	1/1:5,20:25:53.97:468,54,0	1/1:6,29:35:45.12:618,45,0	1/1:4,27:31:74.98:651,75,0	0/0:21,0:22:56.96:0,57,593	0/0:35,2:38:44.05:0,44,917	0/0:38,0:38:4.77:0,5,56	0/0:15,0:16:41.88:0,42,408
chr10	50727215	.	A	AC	3622.11	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=10.083;DP=763;FS=0.682;HRun=0;HaplotypeScore=125.9090;InbreedingCoeff=0.9983;MQ=59.63;MQ0=12;MQRankSum=-2.836;QD=20.70;ReadPosRankSum=-0.584;VQSLOD=4.8140;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:83.82:0,84,527	0/0:8,0:8:24.08:0,24,333	0/0:43,0:13:23.81:0,24,288	0/0:49,0:17:20.93:0,21,276	0/0:37,0:37:99:0,110,1395	0/0:18,0:18:43.28:0,43,294	0/0:21,0:21:54.72:0,55,367	1/1:28,4:30:85.95:766,86,0	0/0:21,0:21:59.93:0,60,370	0/0:33,0:32:89.45:0,89,1109	0/0:28,0:28:84.24:0,84,1107	0/0:27,0:27:71.60:0,72,459	0/0:22,0:22:62.47:0,62,447	0/0:14,0:14:39.13:0,39,541	0/0:20,0:20:51.68:0,52,705	1/1:9,15:24:59.33:438,59,0	0/0:29,0:29:87.16:0,87,1096	0/0:17,0:17:39.26:0,39,540	1/1:24,4:24:68.06:595,68,0	1/1:34,2:35:92.46:674,92,0	1/1:13,5:17:41.91:419,42,0	0/0:27,0:27:75.42:0,75,511	0/0:32,0:32:82.58:0,83,577	0/0:32,0:32:87.64:0,88,583	0/0:22,0:22:60.69:0,61,808	0/0:39,0:39:99:0,112,1421	1/1:34,3:37:99:729,100,0	0/0:16,0:16:41.91:0,42,527
chr10	50727217	.	A	ACAAC	763.70	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.772;DP=760;FS=10.196;HRun=0;HaplotypeScore=176.6469;InbreedingCoeff=0.9958;MQ=59.63;MQ0=13;MQRankSum=-4.446;QD=33.20;ReadPosRankSum=-0.084;VQSLOD=2.6195;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:87.22:0,87,1150	0/0:8,0:8:24.08:0,24,503	0/0:45,0:13:26.87:0,27,425	0/0:49,0:18:27.55:0,28,466	0/0:37,0:37:99:0,111,2176	0/0:18,0:18:45.08:0,45,542	0/0:21,0:21:57.17:0,57,751	0/0:34,0:32:56.77:0,57,856	0/0:21,0:21:63.21:0,63,841	0/0:33,0:32:93.29:0,93,1740	0/0:29,0:29:87.25:0,87,1689	0/0:27,0:27:75.21:0,75,957	0/0:20,0:20:56.84:0,57,706	0/0:14,0:14:39.13:0,39,817	0/0:20,0:20:57.19:0,57,1098	1/1:9,12:23:38.77:859,39,0	0/0:28,0:28:84.18:0,84,1635	0/0:17,0:17:51.13:0,51,893	0/0:26,0:22:41.29:0,41,545	0/0:36,0:35:77.42:0,77,1072	0/0:18,0:17:42.11:0,42,507	0/0:26,0:26:78.17:0,78,958	0/0:32,0:32:84.26:0,84,1130	0/0:32,0:32:87.23:0,87,1123	0/0:22,0:22:66.22:0,66,1276	0/0:37,0:37:99:0,111,2063	0/0:38,0:38:99:0,99,1295	0/0:16,0:16:48.16:0,48,914
chr10	50727219	.	AAAAAC	A	1336.31	PASS	AB=0.937;AC=7;AF=0.125;AN=56;BaseQRankSum=10.687;DP=764;FS=1.242;HRun=0;HaplotypeScore=185.6309;InbreedingCoeff=0.5436;MQ=59.63;MQ0=13;MQRankSum=0.552;QD=8.97;ReadPosRankSum=-0.441;VQSLOD=2.9723;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:89.72:0,90,1483	0/0:9,0:9:27.08:0,27,647	0/0:48,0:14:9.29:0,9,421	0/0:52,0:19:15.67:0,16,473	0/0:39,0:39:99:0,114,2873	0/0:16,0:16:36.11:0,36,576	0/0:19,0:19:48.13:0,48,747	1/1:31,2:31:14.76:413,15,0	0/0:21,0:21:62.70:0,63,992	0/0:34,0:33:93.16:0,93,2262	0/0:30,0:30:84.27:0,84,2227	0/0:25,0:25:66.22:0,66,1083	0/0:20,0:20:57.19:0,57,1021	0/0:15,0:15:42.13:0,42,1207	0/0:22,0:22:63.16:0,63,1560	0/0:23,0:23:6.62:0,7,439	0/0:28,0:28:78.25:0,78,2083	0/0:17,0:17:47.70:0,48,1058	0/1:21,3:21:2.97:383,0,3	1/1:35,1:35:65.73:401,66,0	0/1:17,1:17:23.33:101,0,23	0/0:24,0:24:60.21:0,60,1043	0/0:32,0:32:81.26:0,81,1360	0/0:30,0:30:77.75:0,78,1265	0/0:23,0:23:66.18:0,66,1537	0/0:38,0:38:99:0,108,2724	0/1:37,1:38:32.65:179,0,33	0/0:18,0:18:48.09:0,48,977
chr10	50727222	.	AAC	A	4894.52	PASS	AB=1.000;AC=12;AF=0.214;AN=56;BaseQRankSum=9.961;DP=769;FS=7.837;HRun=0;HaplotypeScore=134.9538;InbreedingCoeff=0.7939;MQ=60.78;MQ0=12;MQRankSum=-2.506;QD=21.37;ReadPosRankSum=-3.086;VQSLOD=4.3170;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:69.27:0,69,460	0/0:11,0:11:33.03:0,33,425	0/0:51,0:19:12.22:0,12,309	0/1:55,0:21:8.15:8,0,244	0/0:40,0:40:99:0,120,1629	0/0:15,0:15:34.72:0,35,213	0/0:17,0:17:43.20:0,43,232	1/1:7,29:34:99:1117,102,0	0/0:21,0:21:59.25:0,59,300	0/0:31,0:30:77.54:0,78,1239	0/0:29,0:29:87.20:0,87,1274	0/0:25,0:25:54.47:0,54,305	0/0:22,0:22:60.49:0,60,404	0/0:16,0:16:45.13:0,45,710	0/0:22,0:22:62.71:0,63,879	0/1:24,0:24:32.87:137,0,33	0/0:26,0:26:78.20:0,78,1207	0/0:17,0:17:19.35:0,19,562	1/1:11,11:20:57.02:639,57,0	1/1:4,33:36:99:1319,105,0	1/1:7,11:18:44.84:496,45,0	0/0:23,0:23:59.74:0,60,341	0/0:30,0:30:74.87:0,75,395	0/0:30,1:31:76.32:0,76,401	0/0:27,0:27:75.08:0,75,941	0/0:37,0:37:99:0,99,1547	1/1:7,30:37:87.20:1180,87,0	0/0:17,0:17:39:0,39,528
chr10	50727223	.	AC	A	2432.72	PASS	AB=0.992;AC=23;AF=0.411;AN=56;BaseQRankSum=16.082;DP=763;FS=4.522;HRun=1;HaplotypeScore=128.6299;InbreedingCoeff=0.3604;MQ=61.54;MQ0=12;MQRankSum=0.051;QD=5.48;ReadPosRankSum=4.753;VQSLOD=0.9097;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:32,0:32:34.23:34,0,58	0/0:11,0:11:33.04:0,33,364	0/0:51,0:20:15.23:0,15,299	0/1:54,2:23:8.49:8,0,208	0/0:40,0:40:91.51:0,92,1232	0/1:15,0:15:5.50:6,0,36	0/1:16,0:16:11.74:12,0,12	1/1:36,0:34:82.60:614,83,0	1/1:21,0:21:20.08:53,20,0	0/0:31,1:31:41.26:0,41,964	0/0:29,0:29:87.13:0,87,1021	0/1:24,1:25:5.59:78,0,6	0/1:23,0:23:15.19:15,0,115	0/0:16,0:16:45.12:0,45,566	0/0:22,0:22:44.04:0,44,662	1/1:23,1:24:2.03:91,2,0	0/0:26,0:26:77.54:0,78,952	0/0:16,0:16:24.08:0,24,462	1/1:22,0:20:38.93:262,39,0	1/1:37,0:36:99:649,103,0	1/1:18,0:18:18.94:172,19,0	0/1:24,0:24:49.24:49,0,66	0/1:30,0:30:10.71:18,0,11	0/1:31,0:31:14.81:56,0,15	0/0:25,0:25:74.53:0,75,783	0/0:37,0:37:99:0,103,1241	1/1:34,0:34:78.33:508,78,0	0/0:13,0:13:39:0,39,436
chr10	50727226	.	AC	A	304.10	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=8.649;DP=761;FS=1.585;HRun=1;HaplotypeScore=137.0321;InbreedingCoeff=0.6737;MQ=62.16;MQ0=12;MQRankSum=-6.570;QD=3.85;ReadPosRankSum=0.071;VQSLOD=0.0950;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:87.28:0,87,1276	0/0:10,0:10:30.10:0,30,471	0/0:52,0:19:42.20:0,42,531	0/1:55,0:22:8.84:9,0,323	0/0:38,0:38:99:0,114,1752	0/0:16,0:16:39.11:0,39,564	0/0:16,0:16:48.14:0,48,692	0/0:35,0:33:93.31:0,93,552	0/0:22,0:22:66.17:0,66,914	0/0:34,0:33:74.48:0,74,1413	0/0:28,0:28:84.13:0,84,1257	0/0:25,0:25:67.76:0,68,876	0/0:23,0:23:65.96:0,66,963	0/0:16,0:16:45.15:0,45,718	0/0:23,0:23:66.21:0,66,1020	1/1:14,10:24:41.14:397,41,0	0/0:25,0:25:75.22:0,75,1153	0/0:15,1:16:19.90:0,20,618	0/0:22,0:20:55.40:0,55,361	0/0:40,0:39:99:0,108,679	0/0:18,0:18:41.37:0,41,320	0/0:22,0:22:65.91:0,66,924	0/0:30,0:30:78.26:0,78,1174	0/0:31,0:31:81.20:0,81,1126	0/0:23,0:23:68.24:0,68,1002	0/0:37,0:37:99:0,111,1736	0/0:35,0:35:87.83:0,88,558	0/0:13,0:13:39.13:0,39,607
chr10	50727227	.	C	CAA	877.31	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=8.714;DP=759;FS=5.448;HRun=2;HaplotypeScore=148.9289;InbreedingCoeff=0.9933;MQ=62.98;MQ0=10;MQRankSum=-5.480;QD=36.55;ReadPosRankSum=-2.353;VQSLOD=2.7772;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:87.29:0,87,1276	0/0:10,0:10:27.09:0,27,396	0/0:53,0:21:24.24:0,24,447	0/0:52,0:22:27.11:0,27,343	0/0:39,0:39:99:0,108,1582	0/0:16,0:16:39.10:0,39,535	0/0:16,0:16:48.15:0,48,684	0/0:34,0:32:39.75:0,40,798	0/0:22,0:22:63.15:0,63,863	0/0:34,0:33:96.28:0,96,1323	0/0:28,0:28:78.24:0,78,1111	0/0:25,0:25:69.23:0,69,1008	0/0:23,0:23:66.22:0,66,958	0/0:16,0:16:45.15:0,45,652	0/0:23,0:23:66.22:0,66,965	1/1:12,12:24:52.87:972,53,0	0/0:26,0:26:75.23:0,75,1074	0/0:15,0:15:37.09:0,37,566	0/0:21,0:19:24.02:0,24,388	0/0:40,0:39:86.55:0,87,1189	0/0:19,0:19:31.63:0,32,342	0/0:22,0:22:66.22:0,66,967	0/0:29,0:29:75.25:0,75,1102	0/0:29,0:29:78.25:0,78,1125	0/0:21,0:21:63.21:0,63,911	0/0:37,0:37:99:0,108,1507	0/0:36,0:36:44.51:0,45,943	0/0:13,0:13:39.10:0,39,550
chr10	50727246	.	AC	A	490.57	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.552;DP=743;FS=6.761;HRun=5;HaplotypeScore=125.1665;InbreedingCoeff=0.9988;MQ=76.08;MQ0=4;MQRankSum=-5.294;QD=22.30;ReadPosRankSum=-1.654;VQSLOD=1.7639;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:87.16:0,87,1077	0/0:11,0:11:33.09:0,33,417	0/0:64,0:38:94.86:0,95,1144	0/0:47,0:28:47.68:0,48,518	0/0:29,0:29:84.28:0,84,1134	0/0:15,0:15:39.12:0,39,514	0/0:20,0:20:35.44:0,35,674	0/0:35,0:34:96.22:0,96,1180	0/0:21,0:21:60.17:0,60,778	0/0:32,0:32:87.25:0,87,1108	0/0:25,0:25:72.16:0,72,895	0/0:26,0:26:72.20:0,72,912	0/0:22,0:22:54.15:0,54,699	0/0:15,0:15:39.13:0,39,527	0/0:23,0:23:41.47:0,41,770	1/1:5,17:22:57.01:585,57,0	0/0:31,0:31:93.15:0,93,1181	0/0:14,0:14:36.09:0,36,446	0/0:12,0:12:33.07:0,33,398	0/0:37,0:37:99:0,105,1385	0/0:19,0:19:48.07:0,48,574	0/0:24,0:24:66.19:0,66,847	0/0:30,0:30:72.21:0,72,942	0/0:26,0:26:69.23:0,69,932	0/0:20,0:20:33.53:0,34,621	0/0:36,0:36:99:0,105,1354	0/0:39,0:39:96.26:0,96,1224	0/0:16,0:16:48.16:0,48,648
chr10	50729584	.	TACC	T	244.17	PASS	AB=0.735;AC=1;AF=0.018;AN=56;BaseQRankSum=5.604;DP=749;FS=1.151;HRun=0;HaplotypeScore=127.7944;InbreedingCoeff=-0.0183;MQ=74.99;MQ0=0;MQRankSum=-4.753;QD=9.77;ReadPosRankSum=2.026;VQSLOD=3.4770;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,102,2338	0/0:12,0:12:36.12:0,36,829	0/0:20,0:21:62.39:0,62,1202	0/0:22,0:23:54.18:0,54,1098	0/0:30,0:30:90.29:0,90,1994	0/0:29,0:29:84.29:0,84,1984	0/0:16,0:16:45.13:0,45,1009	0/0:31,0:31:93.31:0,93,2110	0/0:31,0:31:90.31:0,90,2085	0/0:44,0:44:99:0,132,3052	0/0:19,0:19:57.18:0,57,1302	0/0:35,0:35:99:0,105,2404	0/0:38,0:38:99:0,114,2655	0/0:29,0:29:87.30:0,87,2037	0/0:36,0:36:99:0,108,2534	0/1:16,9:25:99:319,0,248	0/0:13,0:13:39.13:0,39,874	0/0:21,0:21:63.18:0,63,1412	0/0:18,0:18:54.19:0,54,1204	0/0:20,0:20:57.20:0,57,1328	0/0:36,0:35:99:0,108,2509	0/0:32,0:32:96.33:0,96,2201	0/0:28,0:28:84.29:0,84,1953	0/0:28,0:28:84.29:0,84,1963	0/0:27,0:27:81.28:0,81,1915	0/0:39,0:39:99:0,114,2656	0/0:27,0:27:81.28:0,81,1891	0/0:7,0:7:21.07:0,21,497
chr10	50729589	.	GTAGTCATGTGCTAATGACACTTACC	G	1928.31	PASS	AB=0.625;AC=1;AF=0.018;AN=56;BaseQRankSum=6.790;DP=739;FS=0.000;HRun=0;HaplotypeScore=468.1427;InbreedingCoeff=-0.0191;MQ=73.55;MQ0=0;MQRankSum=-5.097;QD=128.55;ReadPosRankSum=1.058;VQSLOD=2.6248;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,111,8360	0/0:14,0:14:42.13:0,42,3479	0/0:19,0:20:13.11:0,13,2465	0/0:20,0:20:48.06:0,48,2647	0/0:28,0:28:84.29:0,84,7882	0/0:28,0:28:84.29:0,84,7383	0/0:16,0:16:48.16:0,48,3923	0/0:32,0:32:90.17:0,90,4903	0/0:31,0:31:93.29:0,93,7390	0/0:43,0:43:99:0,129,11344	0/0:18,0:18:54.19:0,54,5186	0/0:34,0:34:99:0,102,9091	0/0:37,0:37:99:0,111,9747	0/0:32,0:32:96.31:0,96,8439	0/0:38,0:38:99:0,114,9221	0/1:6,9:15:99:2003,0,315	0/0:13,0:13:39.11:0,39,2969	0/0:21,0:21:63.22:0,63,5531	0/0:16,0:16:45.07:0,45,2134	0/0:20,0:20:60.21:0,60,4513	0/0:36,0:35:99:0,102,8343	0/0:32,0:32:93.30:0,93,7918	0/0:28,0:28:84.27:0,84,6222	0/0:31,0:31:93.32:0,93,6686	0/0:28,0:28:84.29:0,84,7823	0/0:36,0:36:99:0,108,10628	0/0:27,0:27:81.28:0,81,6492	0/0:8,0:8:24.08:0,24,2517
chr10	50729612	.	AC	A	612.20	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.938;DP=754;FS=2.662;HRun=2;HaplotypeScore=89.9972;InbreedingCoeff=0.9959;MQ=68.00;MQ0=0;MQRankSum=-6.311;QD=24.49;ReadPosRankSum=2.450;VQSLOD=3.5793;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:96.32:0,96,1420	0/0:13,0:13:39.13:0,39,585	0/0:12,0:12:33.05:0,33,454	0/0:12,0:12:35.11:0,35,445	0/0:31,0:31:93.30:0,93,1371	0/0:32,0:32:96.33:0,96,1437	0/0:24,0:24:72.24:0,72,1079	0/0:33,0:33:93.31:0,93,1374	0/0:28,0:28:81.22:0,81,1171	0/0:46,0:46:99:0,132,1954	0/0:23,0:23:69.23:0,69,1030	0/0:36,0:36:99:0,108,1578	0/0:35,0:35:99:0,105,1570	0/0:36,0:36:99:0,102,1527	0/0:40,0:40:99:0,120,1756	1/1:10,15:25:29.71:707,30,0	0/0:9,0:9:27.09:0,27,405	0/0:18,0:18:54.15:0,54,765	0/0:17,0:17:48.15:0,48,683	0/0:25,0:25:75.25:0,75,1120	0/0:43,0:42:99:0,129,1882	0/0:34,0:34:99:0,102,1523	0/0:21,0:21:60.17:0,60,874	0/0:32,0:32:96.33:0,96,1434	0/0:24,0:24:63.21:0,63,926	0/0:35,0:35:99:0,99,1484	0/0:29,0:29:87.27:0,87,1277	0/0:8,0:8:24.05:0,24,319
chr10	50731010	.	G	GCTGAGTACTTGATATCAGCCAGCTC	11473.85	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.472;DP=768;FS=2.009;HRun=0;HaplotypeScore=464.2440;InbreedingCoeff=0.9998;MQ=84.92;MQ0=0;MQRankSum=-10.642;QD=239.04;ReadPosRankSum=3.543;VQSLOD=4.4855;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:58:99:0,169,10486	0/0:20,0:20:57.20:0,57,3475	0/0:26,0:27:62.89:0,63,2351	0/0:22,0:22:42.08:0,42,1500	0/0:16,0:16:39.13:0,39,2388	0/0:18,0:18:51.17:0,51,2988	0/0:26,0:26:69.24:0,69,4024	0/0:28,0:28:81.26:0,81,3547	0/0:22,0:22:60.19:0,60,3641	0/0:32,0:32:84.27:0,84,3873	0/0:25,0:25:69.22:0,69,4083	0/0:21,0:21:57.20:0,57,2977	0/0:30,0:30:84.27:0,84,4878	0/0:24,0:24:66.23:0,66,3476	0/0:41,0:41:99:0,120,7677	1/1:40,5:48:99:11474,123,0	0/0:36,0:36:96.31:0,96,5560	0/0:25,0:25:54.19:0,54,2736	0/0:26,0:26:63.20:0,63,3143	0/0:19,0:19:45.15:0,45,2368	0/0:29,0:29:78.27:0,78,4400	0/0:32,0:32:84.29:0,84,5152	0/0:18,0:18:48.15:0,48,2683	0/0:31,0:31:93.30:0,93,5417	0/0:23,0:23:69.20:0,69,3693	0/0:32,0:32:84.17:0,84,4840	0/0:26,0:26:69.24:0,69,3784	0/0:13,0:13:39.13:0,39,2504
chr10	50731220	.	TCA	T	158.71	PASS	AB=0.954;AC=13;AF=0.260;AN=50;BaseQRankSum=1.549;DP=476;FS=6.586;HRun=0;HaplotypeScore=67.6843;InbreedingCoeff=-0.1733;MQ=63.57;MQ0=5;MQRankSum=1.432;QD=0.77;ReadPosRankSum=-1.227;VQSLOD=-0.0202;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:23:14.67:0,15,120	0/0:5,0:7:6.01:0,6,68	./.	./.	0/1:20,0:20:6.11:6,0,100	0/1:20,0:20:35:43,0,35	1/1:17,2:21:11.65:91,12,0	0/0:18,0:18:8.89:0,9,59	0/1:12,0:12:6.06:6,0,178	0/1:19,0:19:50.53:51,0,98	0/1:10,0:10:18.89:19,0,38	0/1:15,1:16:17.01:17,0,122	0/0:13,0:13:14.84:0,15,180	0/1:15,0:15:7.65:8,0,129	0/0:18,0:18:3:0,3,25	0/1:21,5:26:34.05:34,0,249	0/1:20,2:21:2.64:3,0,255	0/0:9,0:9:9.02:0,9,114	./.	0/0:17,0:17:15.02:0,15,171	0/0:18,0:18:14.81:0,15,139	0/1:14,0:13:4.93:5,0,19	0/1:9,3:12:13.68:14,0,38	0/0:22,0:23:3.91:0,4,170	0/0:15,0:15:14.78:0,15,187	0/0:23,0:22:17.87:0,18,185	0/0:11,0:15:9.01:0,9,95	0/0:7,0:7:3.01:0,3,43
chr10	50731711	.	GGA	G	590.62	PASS	AB=0.987;AC=19;AF=0.365;AN=52;BaseQRankSum=1.112;DP=649;FS=20.747;HRun=0;HaplotypeScore=90.5877;InbreedingCoeff=0.0714;MQ=76.36;MQ0=9;MQRankSum=1.403;QD=1.72;ReadPosRankSum=-1.002;VQSLOD=0.3447;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:25,7:30:3.87:35,4,0	0/0:5,0:5:5.89:0,6,59	./.	./.	0/1:11,0:11:18.17:18,0,33	1/1:22,0:22:6:56,6,0	1/1:22,8:30:6.01:65,6,0	0/0:24,0:24:2.99:0,3,23	0/1:30,0:31:11.62:12,0,242	0/0:14,0:14:6.01:0,6,71	0/1:19,0:19:14.32:14,0,58	1/1:35,2:37:12.92:199,13,0	1/1:13,11:23:14.87:143,15,0	0/0:18,0:18:6:0,6,68	0/0:35,0:35:6.31:0,6,226	0/0:25,0:26:27.05:0,27,302	0/1:32,1:33:11.11:11,0,276	0/1:12,0:12:13.39:13,0,53	0/0:19,0:19:3.01:0,3,37	0/1:21,0:21:15.99:16,0,60	0/0:19,0:19:7.81:0,8,71	0/0:23,0:23:11.91:0,12,92	0/1:18,1:19:26.29:26,0,38	0/1:22,0:23:3.10:127,0,3	0/0:23,0:23:11.70:0,12,125	0/1:30,0:30:11.73:12,0,130	0/0:27,0:27:2.08:0,2,286	0/0:10,0:9:3.01:0,3,37
chr10	50733175	.	TA	T	695.75	PASS	AB=0.907;AC=11;AF=0.196;AN=56;BaseQRankSum=3.761;DP=521;FS=4.708;HRun=11;HaplotypeScore=64.4361;InbreedingCoeff=0.2774;MQ=78.17;MQ0=3;MQRankSum=-0.813;QD=3.91;ReadPosRankSum=0.148;VQSLOD=0.4019;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:51.07:0,51,505	0/1:4,8:12:1.07:146,0,1	0/1:33,1:16:2.10:2,0,112	0/0:18,0:11:7.80:0,8,57	0/0:32,2:35:52.05:0,52,821	0/0:16,2:19:23.34:0,23,419	0/0:17,0:17:45.03:0,45,435	0/1:26,0:26:21.78:22,0,77	0/0:12,0:12:33.08:0,33,348	0/0:20,0:20:38.95:0,39,382	0/0:17,0:18:47.66:0,48,436	0/0:12,0:12:33:0,33,327	0/0:16,0:16:42.05:0,42,419	0/0:18,0:18:48.04:0,48,474	1/1:3,22:25:31.27:460,31,0	1/1:7,0:9:16.48:50,16,0	0/0:17,2:19:1.87:0,2,404	0/0:15,1:17:23.28:0,23,392	0/1:18,0:18:13.32:76,0,13	0/1:19,0:19:12.96:13,0,85	0/1:5,2:7:15.55:52,0,16	0/0:11,0:11:24.06:0,24,253	0/0:14,1:15:14.47:0,14,349	0/0:11,0:11:30.03:0,30,295	0/0:23,0:23:53.97:0,54,532	0/0:21,0:21:34.55:0,35,530	0/1:27,0:27:28.11:28,0,143	0/0:22,0:22:57.11:0,57,586
chr10	50733744	.	C	CT	2383.49	PASS	AB=0.667;AC=9;AF=0.161;AN=56;BaseQRankSum=-9.041;DP=597;FS=0.959;HRun=7;HaplotypeScore=59.3709;InbreedingCoeff=0.8475;MQ=75.51;MQ0=1;MQRankSum=-0.055;QD=24.57;ReadPosRankSum=-0.547;VQSLOD=3.7231;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:72.07:0,72,682	0/0:8,0:8:18.03:0,18,174	0/0:17,0:18:8.80:0,9,226	0/0:16,0:15:24.45:0,24,219	0/0:8,0:8:24.04:0,24,231	0/0:16,0:16:45.06:0,45,430	0/0:32,0:32:75.05:0,75,701	1/1:2,9:11:27.06:303,27,0	0/0:21,0:21:63.07:0,63,598	0/0:25,0:25:65.58:0,66,614	0/0:17,0:17:42.04:0,42,394	0/0:42,0:42:99:0,117,1113	0/0:20,0:20:57.07:0,57,543	0/0:39,0:40:99:0,104,964	0/0:13,0:13:33.03:0,33,308	0/0:16,0:15:42.04:0,42,395	0/0:39,0:39:99:0,99,930	0/0:25,0:25:66.08:0,66,630	0/1:6,6:12:33.91:161,0,34	1/1:0,6:6:18:200,18,0	1/1:7,39:46:99:1196,99,0	0/0:10,0:10:24.03:0,24,231	0/0:9,0:9:24.03:0,24,228	0/0:41,0:41:99:0,105,988	0/0:16,0:16:39.03:0,39,364	0/0:21,0:21:57.02:0,57,526	1/1:1,21:22:57.17:688,57,0	0/0:16,0:16:48.04:0,48,447
chr10	50735395	.	A	AG	1587.85	PASS	AB=0.718;AC=15;AF=0.268;AN=56;BaseQRankSum=-4.276;DP=440;FS=7.058;HRun=9;HaplotypeScore=55.8725;InbreedingCoeff=0.7578;MQ=77.18;MQ0=0;MQRankSum=0.130;QD=12.31;ReadPosRankSum=-2.196;VQSLOD=2.2872;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:53.95:0,54,461	0/1:3,9:12:1.99:207,0,2	0/0:20,0:18:9.93:0,10,172	0/1:15,0:16:8.04:8,0,86	0/0:18,0:18:44.79:0,45,368	0/0:20,0:20:41.94:0,42,360	0/0:22,0:21:28.37:0,28,390	1/1:5,3:8:8.97:86,9,0	0/0:6,0:6:14.99:0,15,130	0/0:16,0:16:23.98:0,24,208	0/0:15,0:15:35.86:0,36,298	0/0:18,0:18:41.93:0,42,354	0/0:14,0:14:35.96:0,36,306	0/0:16,0:16:35.98:0,36,312	1/1:2,7:9:15.04:166,15,0	1/1:1,9:10:15.04:166,15,0	0/0:26,0:26:62.88:0,63,530	0/0:10,0:9:26.99:0,27,234	0/1:11,13:25:7.04:356,0,7	1/1:5,5:10:15.04:166,15,0	1/1:6,17:23:30.08:332,30,0	0/0:12,0:12:19.78:0,20,154	0/0:10,0:10:17.98:0,18,156	0/0:14,0:14:35.98:0,36,308	0/0:11,0:12:17.02:0,17,136	0/0:25,0:25:56.95:0,57,487	1/1:3,12:16:27.06:290,27,0	0/0:15,0:15:20.94:0,21,179
chr10	50735919	.	TG	T	2298.69	PASS	AB=0.971;AC=20;AF=0.357;AN=56;BaseQRankSum=5.324;DP=438;FS=9.649;HRun=10;HaplotypeScore=50.0691;InbreedingCoeff=0.8124;MQ=74.34;MQ0=0;MQRankSum=0.379;QD=14.46;ReadPosRankSum=3.199;VQSLOD=2.8653;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,6:10:14.98:130,15,0	0/0:4,0:4:9.01:0,9,92	0/0:14,0:13:15.43:0,15,141	0/1:15,0:13:21.34:21,0,68	0/0:22,1:24:21.90:0,22,444	1/1:3,18:21:11.81:331,12,0	1/1:1,10:11:29.99:260,30,0	0/0:31,0:32:33.04:0,33,339	1/1:2,13:15:38.99:339,39,0	0/0:13,0:13:30.06:0,30,314	0/0:15,0:15:27.03:0,27,285	1/1:1,7:8:21:182,21,0	1/1:0,20:20:53.97:466,54,0	0/0:12,0:12:30.08:0,30,332	0/0:17,0:17:36.10:0,36,398	0/0:12,0:12:36.08:0,36,389	0/0:15,0:15:33.09:0,33,363	0/0:4,0:9:14.69:0,15,119	0/0:17,0:17:20.86:0,21,200	0/0:23,0:23:57.14:0,57,622	0/1:15,1:16:2.01:2,0,191	1/1:1,9:10:24:208,24,0	1/1:7,15:22:11.81:331,12,0	1/1:2,9:11:26.97:234,27,0	0/0:15,1:16:0.98:0,1,218	0/0:19,0:19:33.02:0,33,349	0/0:24,0:24:54.15:0,54,597	0/0:12,0:12:24.05:0,24,257
chr10	50736081	.	TAA	T	1550.67	PASS	AB=0.723;AC=23;AF=0.411;AN=56;BaseQRankSum=-0.236;DP=455;FS=0.466;HRun=17;HaplotypeScore=72.2118;InbreedingCoeff=0.5704;MQ=78.73;MQ0=5;MQRankSum=-0.911;QD=7.38;ReadPosRankSum=2.875;VQSLOD=0.1538;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,8:15:24.67:197,25,0	0/0:1,1:5:1.40:0,1,52	0/0:38,0:17:11.91:0,12,135	0/1:25,0:14:10.85:11,0,22	0/0:23,1:29:38.43:0,38,527	1/1:5,13:18:35.71:285,36,0	1/1:2,8:10:20.92:166,21,0	0/1:9,3:25:12.60:13,0,80	1/1:2,8:10:20.39:152,20,0	0/0:13,0:17:30.54:0,31,285	0/0:16,2:23:28.62:0,29,444	1/1:2,8:12:23.34:166,23,0	1/1:3,13:18:33.55:307,34,0	0/0:14,1:16:5.58:0,6,225	0/0:8,0:20:30.06:0,30,159	0/1:6,2:13:18.98:32,0,19	0/0:5,0:7:17.28:0,17,131	0/0:5,0:9:21.58:0,22,153	0/1:8,2:14:35.78:36,0,66	0/1:8,3:17:38.86:39,0,117	0/0:4,0:13:27.43:0,27,121	1/1:2,4:6:14.43:104,14,0	1/1:7,8:18:16.07:154,16,0	1/1:5,4:9:11.75:95,12,0	0/0:14,0:16:43.92:0,44,457	0/0:13,0:14:29.56:0,30,337	0/0:5,2:19:8.26:0,8,79	0/0:12,1:16:21.45:0,21,376
chr10	50736501	.	CCCCCA	C	1284.46	PASS	AB=1.000;AC=14;AF=0.250;AN=56;BaseQRankSum=5.537;DP=399;FS=3.946;HRun=0;HaplotypeScore=85.9673;InbreedingCoeff=0.5894;MQ=81.03;MQ0=0;MQRankSum=-4.056;QD=10.28;ReadPosRankSum=-1.425;VQSLOD=2.2885;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:18,0:18:53.91:54,0,74	0/0:8,0:8:20.92:0,21,471	0/0:15,0:15:22.50:0,23,949	0/0:20,0:20:46.94:0,47,989	0/0:21,0:21:45.10:0,45,1144	0/0:11,0:11:7.46:0,7,86	0/0:19,0:19:32.89:0,33,283	1/1:13,0:13:15.39:115,15,0	0/0:7,0:7:12.60:0,13,146	0/0:18,0:18:44.92:0,45,1079	0/0:12,0:12:33.11:0,33,918	0/0:2,0:2:2.92:0,3,17	0/1:11,0:11:4.01:4,0,131	0/0:27,0:27:72.21:0,72,1963	0/0:13,0:13:27.08:0,27,761	1/1:3,14:17:36.12:712,36,0	0/0:13,0:13:35.98:0,36,744	0/0:14,0:14:39.13:0,39,1118	1/1:7,1:8:7.13:87,7,0	1/1:17,1:18:17.61:169,18,0	0/1:12,0:12:0:0,0,0	0/0:15,0:15:6:0,6,60	0/1:8,0:8:19.45:19,0,26	0/0:8,0:8:0.95:0,1,28	0/0:22,0:22:52.69:0,53,1264	0/0:19,0:19:45.11:0,45,1050	1/1:19,1:20:26.91:294,27,0	0/0:10,0:10:27.09:0,27,762
chr10	50736502	.	CCCCA	C	1633.08	PASS	AB=0.940;AC=20;AF=0.357;AN=56;BaseQRankSum=2.992;DP=402;FS=14.875;HRun=0;HaplotypeScore=77.8085;InbreedingCoeff=0.4428;MQ=80.92;MQ0=0;MQRankSum=-4.021;QD=9.33;ReadPosRankSum=-4.379;VQSLOD=-0.6200;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:20,0:20:3.39:127,0,3	0/0:8,0:8:20.17:0,20,391	0/0:15,0:15:22.45:0,22,792	0/0:20,0:20:50.69:0,51,839	0/0:20,0:20:45.05:0,45,962	0/1:12,0:12:18.94:104,0,19	0/1:20,0:20:24.34:24,0,74	1/1:12,2:14:24.01:285,24,0	0/1:7,0:7:24.59:25,0,63	0/0:18,0:18:33.11:0,33,897	0/0:13,0:13:36.03:0,36,788	1/1:2,0:2:0.47:1,0,0	0/1:11,0:11:15.25:15,0,38	0/0:27,0:27:72.21:0,72,1662	0/0:12,0:12:27.07:0,27,642	1/1:15,1:16:36.11:417,36,0	0/0:15,0:15:41.89:0,42,655	0/0:13,0:13:39.13:0,39,949	1/1:6,0:6:9.89:89,10,0	1/1:8,10:18:20.84:186,21,0	0/1:1,11:12:0:0,0,0	0/0:15,0:15:5.76:0,6,31	0/1:9,0:9:6.93:37,0,7	0/1:9,0:9:3.28:59,0,3	0/0:22,0:22:32.09:0,32,1025	0/0:19,0:19:42.88:0,43,850	1/1:4,15:19:27.09:444,27,0	0/0:10,0:10:27.09:0,27,642
chr10	50736503	.	CCCA	C	1847.98	PASS	AB=1.000;AC=27;AF=0.482;AN=56;BaseQRankSum=3.282;DP=400;FS=40.622;HRun=0;HaplotypeScore=69.6270;InbreedingCoeff=0.8317;MQ=80.06;MQ0=0;MQRankSum=-4.622;QD=10.27;ReadPosRankSum=-5.922;VQSLOD=-0.1318;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:20:31.99:233,32,0	0/0:7,0:7:10.09:0,10,309	0/0:15,0:15:15.64:0,16,628	0/0:19,0:19:46.41:0,46,662	0/0:20,0:20:45.94:0,46,797	1/1:12,0:12:13.40:143,13,0	1/1:23,0:23:29.51:222,30,0	1/1:13,1:14:27:242,27,0	0/1:7,0:7:8.55:57,0,9	0/0:18,0:18:33.08:0,33,746	0/0:12,0:12:36.04:0,36,644	1/1:2,0:2:3:26,3,0	1/1:11,0:11:12.87:105,13,0	0/0:27,0:27:72.03:0,72,1356	0/0:12,0:12:27.06:0,27,525	1/1:16,0:16:36.06:347,36,0	0/0:16,0:16:47.76:0,48,557	0/0:13,0:13:39.13:0,39,780	1/1:6,0:6:12:106,12,0	1/1:16,2:18:20.66:157,21,0	0/0:11,0:11:0:0,0,0	1/1:14,0:14:0.92:2,1,0	1/1:10,0:10:10.20:72,10,0	1/1:8,0:8:10.31:73,10,0	0/0:22,0:22:21.90:0,22,797	0/0:18,0:18:42.85:0,43,709	1/1:18,1:19:27.05:272,27,0	0/0:10,0:10:27.08:0,27,524
chr10	50736983	.	T	TAA	3614.31	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-7.008;DP=516;FS=0.000;HRun=9;HaplotypeScore=93.0384;InbreedingCoeff=0.9850;MQ=76.11;MQ0=1;MQRankSum=-0.369;QD=28.91;ReadPosRankSum=-4.478;VQSLOD=2.7568;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:51.08:0,51,523	0/0:5,0:5:12.03:0,12,128	0/0:11,0:12:11.42:0,11,94	0/0:21,0:20:29.05:0,29,299	0/0:23,0:23:60.11:0,60,622	0/0:26,0:26:69.15:0,69,727	0/0:17,0:17:38.79:0,39,386	1/1:10,22:34:63.12:854,63,0	0/0:22,0:22:66.17:0,66,702	0/0:22,0:22:57.13:0,57,601	0/0:13,0:13:39.10:0,39,415	0/0:16,0:16:33.03:0,33,343	0/0:19,0:19:54.13:0,54,575	0/0:24,0:24:54.10:0,54,575	0/0:15,0:15:42.08:0,42,439	1/1:3,0:18:39.06:373,39,0	0/0:24,0:24:63.14:0,63,669	0/0:16,0:16:36.95:0,37,412	1/1:9,12:23:44.12:611,44,0	1/1:1,17:19:47.61:666,48,0	1/1:2,7:10:21.02:279,21,0	0/0:12,0:12:30.07:0,30,319	0/0:16,0:16:42.09:0,42,447	0/0:16,0:16:36.07:0,36,383	0/0:16,0:16:42.10:0,42,447	0/0:25,0:26:66.11:0,66,687	1/1:1,20:21:54.18:831,54,0	0/0:9,0:10:23.80:0,24,235
chr10	50736999	.	GA	G	3996.50	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=5.783;DP=517;FS=0.369;HRun=8;HaplotypeScore=74.8782;InbreedingCoeff=0.9964;MQ=74.23;MQ0=1;MQRankSum=-1.088;QD=24.98;ReadPosRankSum=3.955;VQSLOD=4.2920;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,15:16:42.07:405,42,0	0/0:7,0:7:21.06:0,21,254	0/0:15,0:15:28.85:0,29,309	0/0:20,0:19:31.11:0,31,324	0/0:26,0:26:75.20:0,75,882	1/1:2,23:25:60.09:579,60,0	1/1:4,18:21:51.08:492,51,0	0/0:28,0:28:72.22:0,72,867	1/1:0,23:23:69.11:666,69,0	0/0:22,0:22:57.17:0,57,689	0/0:17,0:17:39.12:0,39,468	1/1:2,13:15:33.05:319,33,0	1/1:1,20:21:54.09:521,54,0	0/0:22,0:22:63.18:0,63,749	0/0:15,0:15:39.11:0,39,460	0/0:16,0:16:39.08:0,39,446	0/0:22,0:22:66.19:0,66,785	0/0:18,0:18:42.08:0,42,479	0/0:26,1:27:49.25:0,49,847	0/0:22,0:22:57.16:0,57,667	0/0:7,0:7:15.05:0,15,181	1/1:1,12:13:33.05:318,33,0	1/1:1,13:14:39.06:376,39,0	1/1:0,11:11:33.05:319,33,0	0/0:16,0:16:48.15:0,48,580	0/0:26,0:27:81.09:0,81,935	0/0:21,0:21:51.12:0,51,598	0/0:9,0:9:27.08:0,27,326
chr10	50737542	.	CCA	C	894.40	PASS	AB=0.951;AC=28;AF=0.519;AN=54;BaseQRankSum=4.830;DP=478;FS=2.319;HRun=0;HaplotypeScore=89.9567;InbreedingCoeff=0.2761;MQ=72.35;MQ0=8;MQRankSum=-0.025;QD=2.77;ReadPosRankSum=0.651;VQSLOD=1.7111;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:22:1.21:36,1,0	0/0:8,0:10:11.99:0,12,103	0/0:33,0:26:3.62:0,4,11	./.	0/0:14,0:14:9.03:0,9,133	0/0:23,0:23:9.65:0,10,108	0/1:22,0:21:21.95:67,0,22	1/1:25,0:24:0.47:1,0,0	0/1:13,0:13:5.51:25,0,6	0/1:19,0:18:10.43:10,0,272	0/1:9,1:11:34.80:35,0,78	1/1:12,0:12:8.46:45,8,0	1/1:6,0:6:8.70:54,9,0	0/1:18,2:18:74.47:74,0,118	0/0:2,0:10:6:0,6,52	0/0:10,0:14:15.01:0,15,146	0/1:19,4:22:32.38:32,0,313	0/1:5,0:5:6.12:6,0,7	1/1:14,0:14:2.74:55,3,0	1/1:23,0:22:9.10:87,9,0	1/1:21,0:21:14.90:109,15,0	1/1:17,0:17:8.95:67,9,0	0/1:18,0:17:0.21:0,0,0	1/1:32,0:32:8.93:207,9,0	0/0:8,0:8:10.80:0,11,119	0/0:9,0:9:11.43:0,11,140	1/1:20,0:20:4.32:150,4,0	0/0:7,0:7:8.82:0,9,100
chr10	50737580	.	ACACACT	A	693.55	PASS	AB=0.964;AC=12;AF=0.214;AN=56;BaseQRankSum=5.069;DP=565;FS=1.778;HRun=0;HaplotypeScore=137.4239;InbreedingCoeff=-0.1009;MQ=58.71;MQ0=8;MQRankSum=-0.127;QD=2.89;ReadPosRankSum=-2.900;VQSLOD=1.3065;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:16.07:0,16,89	0/0:12,0:12:15.03:0,15,312	0/0:29,0:13:28.47:0,28,335	0/0:26,0:14:21.13:0,21,282	0/0:21,0:21:60:0,60,857	0/1:18,0:18:97.53:98,0,379	0/1:16,0:16:78.78:79,0,347	0/1:20,0:19:17.08:229,0,17	0/1:10,0:10:43.49:43,0,220	0/0:27,0:27:53.94:0,54,1303	0/0:19,0:19:44.70:0,45,659	0/1:3,9:12:1.55:84,0,2	0/1:12,0:12:10.31:10,0,14	0/0:21,0:19:48.04:0,48,772	0/0:16,0:16:27.02:0,27,397	0/0:19,0:19:13.21:0,13,746	0/0:33,0:32:71.93:0,72,1160	0/0:11,0:10:21.90:0,22,343	0/1:25,0:25:54.09:206,0,54	0/1:24,0:23:8.55:43,0,9	0/1:27,0:26:5.94:6,0,38	0/0:19,0:19:7.41:0,7,31	0/1:20,0:19:0.01:0,0,0	0/1:31,0:31:24.93:25,0,102	0/0:11,0:11:24:0,24,359	0/0:21,0:21:29.01:0,29,776	0/1:25,0:25:13.77:14,0,97	0/0:12,0:11:32.89:0,33,412
chr10	50737582	.	ACACT	A	1649.97	PASS	AB=0.975;AC=22;AF=0.393;AN=56;BaseQRankSum=9.832;DP=567;FS=7.972;HRun=0;HaplotypeScore=118.8038;InbreedingCoeff=0.4726;MQ=61.76;MQ0=7;MQRankSum=1.309;QD=5.91;ReadPosRankSum=0.501;VQSLOD=1.6131;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:29:1.27:83,1,0	0/0:14,0:14:20.60:0,21,257	0/0:31,0:15:38.22:0,38,413	0/0:27,0:15:24.14:0,24,313	0/0:21,0:21:59.97:0,60,692	0/1:18,1:19:99:119,0,167	0/1:15,1:16:99:173,0,155	1/1:17,0:16:5.75:235,6,0	0/1:10,0:10:88.08:88,0,101	0/0:26,0:26:51.10:0,51,953	0/0:19,0:19:19.95:0,20,429	1/1:11,1:12:8.82:106,9,0	1/1:2,10:12:8.27:80,8,0	0/0:22,0:21:40.34:0,40,590	0/0:16,0:16:26.99:0,27,283	0/0:19,0:19:13.21:0,13,550	0/0:32,0:31:74.84:0,75,889	0/0:11,0:10:21.87:0,22,269	0/1:26,0:26:29.67:294,0,30	1/1:24,1:24:20.54:161,21,0	1/1:26,0:25:16.31:84,16,0	1/1:19,0:19:8.32:38,8,0	0/0:3,17:19:0.14:0,0,1	1/1:30,2:32:32.72:233,33,0	0/0:10,0:10:23.98:0,24,281	0/0:20,0:20:28.12:0,28,614	0/1:23,1:24:13.36:142,0,13	0/1:12,0:11:1.06:1,0,246
chr10	50737584	.	ACT	A	2828.87	PASS	AB=0.907;AC=24;AF=0.429;AN=56;BaseQRankSum=9.457;DP=566;FS=20.555;HRun=0;HaplotypeScore=99.2627;InbreedingCoeff=0.5297;MQ=62.13;MQ0=7;MQRankSum=0.380;QD=9.49;ReadPosRankSum=0.495;VQSLOD=1.2605;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:27,3:30:3.81:152,4,0	0/0:13,0:13:18.04:0,18,165	0/0:33,0:17:44.23:0,44,478	0/0:27,0:16:23.58:0,24,309	0/0:22,0:22:59.92:0,60,557	0/1:19,0:19:17.26:211,0,17	0/1:14,2:16:15.79:211,0,16	1/1:4,13:16:9.18:238,9,0	0/1:10,0:10:9.24:106,0,9	0/0:27,0:27:29.41:0,29,719	0/0:18,0:18:30.38:0,30,347	1/1:11,1:12:8.99:93,9,0	1/1:10,2:12:8.86:115,9,0	0/0:22,0:21:7.60:0,8,376	0/0:16,0:16:26.98:0,27,239	0/0:19,0:19:13.10:0,13,347	0/0:30,0:29:46.26:0,46,600	0/0:11,0:10:9.11:0,9,146	0/1:9,17:26:21.45:354,0,21	1/1:2,22:23:20.93:247,21,0	1/1:6,20:25:18.04:252,18,0	1/1:2,17:19:9.03:137,9,0	0/1:18,1:18:0.02:0,0,1	1/1:5,27:32:39.06:529,39,0	0/0:10,0:10:7.80:0,8,203	0/0:20,0:20:28.58:0,29,450	1/1:3,21:24:21.99:356,22,0	0/1:12,0:11:25.99:26,0,180
chr10	50737586	.	T	TCA	3220.27	PASS	AB=1.000;AC=28;AF=0.500;AN=56;BaseQRankSum=8.898;DP=565;FS=19.586;HRun=0;HaplotypeScore=102.1502;InbreedingCoeff=0.8521;MQ=63.16;MQ0=7;MQRankSum=-0.859;QD=10.63;ReadPosRankSum=0.829;VQSLOD=2.0095;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:10,20:30:5.87:47,6,0	0/0:13,0:13:11.59:0,12,130	0/0:34,0:18:54:0,54,673	0/0:27,0:16:31.20:0,31,477	0/0:24,0:24:60.18:0,60,771	1/1:17,0:17:16.55:424,17,0	1/1:16,1:17:47.50:546,48,0	1/1:18,0:17:39.13:590,39,0	1/1:11,0:11:20.31:228,20,0	0/0:27,0:27:60.15:0,60,784	0/0:18,0:18:39.11:0,39,493	1/1:12,0:12:8.65:56,9,0	1/1:12,0:12:8.30:59,8,0	0/0:21,0:20:45.15:0,45,588	0/0:16,0:16:20.68:0,21,277	0/1:19,0:19:38.05:38,0,250	0/0:27,0:26:66.12:0,66,817	0/0:13,0:12:23.81:0,24,283	1/1:23,0:24:47.88:610,48,0	1/1:24,0:23:20.87:195,21,0	1/1:25,1:25:18.80:159,19,0	1/1:19,0:19:8.73:71,9,0	0/1:19,0:18:0.18:0,0,0	1/1:31,0:31:27.12:254,27,0	0/0:9,0:9:20.85:0,21,250	0/0:20,0:20:48.06:0,48,591	1/1:24,0:24:23.51:160,24,0	0/0:13,0:12:21.06:0,21,273
chr10	50739613	.	G	GCT	1936.56	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=1.644;DP=647;FS=5.424;HRun=0;HaplotypeScore=136.6898;InbreedingCoeff=0.8097;MQ=73.52;MQ0=14;MQRankSum=-1.100;QD=11.60;ReadPosRankSum=-4.150;VQSLOD=2.3423;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:27:41.54:0,42,344	0/0:9,0:9:20.97:0,21,183	0/0:32,0:27:57.92:0,58,618	0/0:39,0:30:73.48:0,73,725	0/0:19,0:18:45.04:0,45,504	0/0:11,0:11:20.98:0,21,184	0/0:22,0:21:3.32:0,3,263	1/1:37,0:37:93.09:857,93,0	0/0:26,0:26:24.14:0,24,350	0/0:30,0:29:69.48:0,69,805	0/0:12,0:12:33.03:0,33,353	0/0:21,0:21:24.17:0,24,389	0/0:25,0:25:24.52:0,25,403	0/0:32,0:32:51.23:0,51,776	0/0:32,0:32:38.18:0,38,359	0/1:27,0:27:24.95:25,0,227	0/0:25,0:25:68.90:0,69,683	0/0:21,0:21:51.53:0,52,577	1/1:3,16:17:50.85:465,51,0	1/1:18,0:18:32.97:289,33,0	1/1:10,21:28:5.97:106,6,0	0/0:16,0:16:32.98:0,33,295	0/0:9,0:9:17.71:0,18,131	0/0:27,0:27:26.59:0,27,217	0/0:13,0:13:33.01:0,33,341	0/0:27,0:27:71.71:0,72,748	1/1:30,5:31:14.61:366,15,0	0/0:4,0:4:9.01:0,9,93
chr10	50739616	.	C	CTG	908.38	PASS	AB=0.972;AC=20;AF=0.370;AN=54;BaseQRankSum=6.903;DP=728;FS=8.126;HRun=0;HaplotypeScore=184.6048;InbreedingCoeff=-0.0435;MQ=67.33;MQ0=16;MQRankSum=-2.890;QD=2.09;ReadPosRankSum=-0.377;VQSLOD=2.0456;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:41,1:40:28.65:29,0,31	0/1:9,0:9:13.20:50,0,13	0/1:29,0:25:4.95:17,0,5	0/0:37,0:28:2.65:0,3,23	0/0:19,0:18:24.06:0,24,267	0/0:18,0:18:2.78:0,3,14	0/1:16,8:23:7.34:84,0,7	./.	0/1:27,2:29:41.66:70,0,42	0/0:36,0:35:37.97:0,38,393	0/0:12,0:15:23.70:0,24,210	0/1:27,0:27:62.26:62,0,83	0/1:29,0:28:19.27:74,0,19	0/0:32,2:34:2.20:0,2,417	0/1:34,0:34:25.42:36,0,25	1/1:28,6:34:32.10:350,32,0	0/0:27,0:27:27.03:0,27,290	0/0:21,0:22:3.70:0,4,332	0/1:20,0:19:3.19:92,0,3	1/1:18,0:18:5.78:31,6,0	0/1:32,0:30:12.50:13,0,25	0/1:24,0:24:12.91:13,0,25	1/1:17,0:17:2.92:19,3,0	1/1:26,1:27:4.50:49,5,0	0/0:13,0:16:17.71:0,18,161	0/0:26,0:31:29.50:0,29,342	0/1:36,0:32:73.50:79,0,74	0/0:2,0:4:5.85:0,6,47
chr10	50739640	.	G	GTCTGTCTGTCTGTC	3867.37	PASS	AB=0.953;AC=16;AF=0.286;AN=56;BaseQRankSum=8.961;DP=739;FS=20.397;HRun=0;HaplotypeScore=302.9882;InbreedingCoeff=0.2376;MQ=46.86;MQ0=17;MQRankSum=-4.522;QD=11.48;ReadPosRankSum=-4.009;VQSLOD=0.3329;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:43:44.36:0,44,655	0/0:9,0:9:21.06:0,21,412	0/0:11,0:6:17.37:0,17,214	0/0:21,0:10:24.07:0,24,409	0/0:23,0:22:63.19:0,63,1790	0/1:23,0:23:25:25,0,311	0/1:27,0:26:86.31:86,0,392	1/1:37,0:36:10.42:1056,10,0	0/1:32,0:32:99:155,0,432	0/0:34,0:33:85.85:0,86,2703	0/0:19,0:19:51.16:0,51,1613	0/1:27,0:27:21.92:22,0,644	0/1:28,0:27:67.52:68,0,596	0/0:32,0:32:76.12:0,76,2527	0/0:36,0:36:17.46:0,17,388	0/0:35,0:35:55.95:0,56,644	0/0:27,0:27:73.02:0,73,1953	0/0:23,0:23:63.18:0,63,2074	1/1:22,0:21:20.37:905,20,0	1/1:2,11:20:6.02:328,6,0	1/1:36,0:31:12.11:197,12,0	0/1:30,0:29:98.08:98,0,332	0/1:19,0:19:34.34:64,0,34	0/0:16,0:31:7.34:0,7,216	0/0:22,0:22:47.28:0,47,1383	0/0:30,0:30:90.28:0,90,2731	0/1:14,13:32:19.11:864,0,19	0/0:3,0:3:6.02:0,6,237
chr10	50739648	.	G	GTGTGTCTGTC	6561.54	PASS	AB=0.964;AC=26;AF=0.464;AN=56;BaseQRankSum=5.177;DP=737;FS=1.748;HRun=0;HaplotypeScore=254.3470;InbreedingCoeff=0.3189;MQ=46.92;MQ0=15;MQRankSum=-1.699;QD=12.87;ReadPosRankSum=-6.320;VQSLOD=2.3168;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:44,0:41:31.21:206,0,31	0/1:6,0:6:10.20:89,0,10	0/1:12,0:8:2.27:2,0,186	0/0:20,0:8:14.61:0,15,207	0/0:24,0:24:65.91:0,66,1137	1/1:25,0:25:7:190,7,0	1/1:26,0:25:19.59:480,20,0	1/1:39,0:38:90.19:1247,90,0	0/1:34,0:34:14.93:416,0,15	0/0:33,0:32:60.79:0,61,1280	0/0:19,0:19:46.38:0,46,926	0/1:26,0:26:82.50:137,0,83	0/1:26,0:25:8.45:211,0,8	0/0:30,0:30:68.81:0,69,1593	0/1:16,16:37:25.36:95,0,25	1/1:38,0:38:50.19:712,50,0	0/0:23,0:23:35.53:0,36,1040	0/0:24,0:24:21.19:0,21,1225	1/1:22,0:21:46.73:625,47,0	1/1:23,0:23:21.03:432,21,0	0/1:34,0:30:15.58:234,0,16	0/1:29,0:28:4.23:350,0,4	1/1:21,0:21:23.70:362,24,0	1/1:33,0:33:11.36:211,11,0	0/0:23,0:23:45.59:0,46,870	0/0:27,0:27:59.84:0,60,1277	0/1:35,0:31:63.66:563,0,64	0/0:3,0:3:9.01:0,9,200
chr10	50741052	.	A	AG	4517.64	PASS	AB=0.846;AC=17;AF=0.304;AN=56;BaseQRankSum=9.500;DP=513;FS=0.412;HRun=1;HaplotypeScore=72.4519;InbreedingCoeff=0.9062;MQ=56.40;MQ0=52;MQRankSum=-8.603;QD=25.67;ReadPosRankSum=2.740;VQSLOD=4.8114;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,2:14:23.76:314,24,0	0/0:7,0:7:21.04:0,21,255	0/0:37,0:14:23.94:0,24,267	0/0:21,0:10:4.25:0,4,236	0/0:23,0:23:66.17:0,66,820	1/1:23,2:19:57.19:802,57,0	1/1:15,4:15:32.26:486,32,0	0/0:21,0:21:57.17:0,57,711	1/1:12,0:12:27.09:366,27,0	0/0:36,0:33:93.30:0,93,1197	0/0:15,0:14:42.12:0,42,530	1/1:18,1:14:39.13:545,39,0	1/1:19,1:15:30.10:423,30,0	0/0:18,0:13:38.79:0,39,467	0/0:16,0:15:45.13:0,45,570	0/0:17,0:16:42.14:0,42,545	0/0:19,0:15:42.04:0,42,495	0/0:13,0:11:33.11:0,33,428	0/0:8,0:8:24.08:0,24,306	0/0:16,0:17:39.59:0,40,496	0/0:4,0:3:6.02:0,6,78	1/1:20,3:18:51.17:719,51,0	1/1:18,1:18:48.15:652,48,0	0/1:18,4:18:1.53:211,0,2	0/0:19,0:19:57.07:0,57,673	0/0:14,0:14:42.09:0,42,526	0/0:23,0:20:54.17:0,54,695	0/0:9,0:7:12.04:0,12,156
chr10	50741053	.	GAA	G	4296.31	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=11.007;DP=515;FS=0.000;HRun=3;HaplotypeScore=79.4931;InbreedingCoeff=0.9125;MQ=53.50;MQ0=61;MQRankSum=-9.808;QD=24.27;ReadPosRankSum=2.432;VQSLOD=3.2642;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,6:12:23.73:291,24,0	0/0:7,0:7:21.04:0,21,363	0/0:35,0:12:26.79:0,27,423	0/0:20,0:10:0.63:0,1,364	0/0:26,0:26:72.15:0,72,1312	1/1:14,12:19:57.15:782,57,0	1/1:10,8:14:38.43:465,38,0	0/0:21,0:21:56.81:0,57,759	1/1:1,11:12:27.09:366,27,0	0/0:36,0:33:99:0,99,1872	0/0:15,0:14:42.13:0,42,813	1/1:8,11:14:39.13:551,39,0	1/1:13,7:14:29.69:389,30,0	0/0:17,0:13:38.72:0,39,717	0/0:17,0:16:48.12:0,48,899	0/0:17,0:16:42.11:0,42,501	0/0:18,0:14:40.92:0,41,696	0/0:13,0:11:33.11:0,33,647	0/0:8,0:8:24.07:0,24,326	0/0:15,0:15:38.23:0,38,408	0/0:4,0:3:6.02:0,6,92	1/1:17,7:17:49.89:645,50,0	1/1:6,13:18:48.10:627,48,0	1/1:20,3:18:2.96:181,3,0	0/0:20,0:20:60.13:0,60,1051	0/0:15,0:14:42.14:0,42,812	0/0:21,0:18:54.14:0,54,580	0/0:11,0:7:12.04:0,12,243
chr10	50741059	.	GA	G	5425.16	PASS	AB=0.767;AC=29;AF=0.518;AN=56;BaseQRankSum=11.127;DP=533;FS=3.534;HRun=3;HaplotypeScore=66.2942;InbreedingCoeff=0.7556;MQ=44.17;MQ0=98;MQRankSum=-6.606;QD=18.27;ReadPosRankSum=1.193;VQSLOD=4.6038;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,6:12:11.33:244,11,0	0/0:4,0:4:12.04:0,12,166	0/0:31,0:8:24.06:0,24,306	0/0:19,0:9:17.27:0,17,199	0/0:26,0:26:64.22:0,64,891	1/1:17,12:19:51.52:595,52,0	1/1:6,10:12:29.75:316,30,0	0/1:8,11:19:19.37:352,0,19	1/1:1,10:12:27.07:310,27,0	0/0:37,0:32:93.02:0,93,1252	0/0:15,0:14:35.54:0,36,496	1/1:10,11:15:41.16:474,41,0	1/1:14,7:14:17.59:312,18,0	0/0:20,0:13:33.09:0,33,435	0/0:16,0:15:45.13:0,45,594	1/1:3,14:15:36.11:445,36,0	0/1:17,0:11:3.96:4,0,370	0/0:15,0:11:27.09:0,27,373	0/1:5,5:10:4.19:189,0,4	1/1:3,13:16:39.80:453,40,0	1/1:3,2:3:3.01:37,3,0	1/1:22,7:16:43.06:502,43,0	1/1:7,13:16:40.62:493,41,0	1/1:18,5:14:3.30:103,3,0	0/0:19,0:18:54.11:0,54,709	0/0:18,0:14:39.13:0,39,528	1/1:6,18:22:23.89:595,24,0	0/0:15,0:8:7.03:0,7,121
chr10	50741060	.	A	AAG	5531.50	PASS	AB=0.972;AC=30;AF=0.536;AN=56;BaseQRankSum=11.103;DP=535;FS=1.294;HRun=0;HaplotypeScore=75.9686;InbreedingCoeff=0.8065;MQ=43.62;MQ0=99;MQRankSum=-6.505;QD=18.20;ReadPosRankSum=0.884;VQSLOD=4.5153;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:13:19.36:282,19,0	0/0:4,0:4:12.04:0,12,166	0/0:31,0:8:24.06:0,24,305	0/0:20,0:9:16.22:0,16,189	0/0:26,0:26:64.87:0,65,883	1/1:29,1:20:45.97:583,46,0	1/1:20,0:16:36.71:352,37,0	0/1:17,0:17:13.75:342,0,14	1/1:12,0:13:27.96:312,28,0	0/0:37,0:32:93.12:0,93,1255	0/0:14,0:13:35.99:0,36,497	1/1:21,1:16:41.56:475,42,0	1/1:21,0:14:22.20:345,22,0	0/0:18,0:11:33.09:0,33,435	0/0:16,0:15:45.12:0,45,590	1/1:16,0:14:36.11:445,36,0	0/1:16,1:11:9.64:10,0,370	0/0:14,0:10:27.09:0,27,373	1/1:10,0:10:5.79:195,6,0	1/1:17,0:16:39.13:452,39,0	1/1:5,0:3:3.01:37,3,0	1/1:28,0:15:42.59:500,43,0	1/1:20,0:16:34.83:486,35,0	1/1:22,2:15:13.81:120,14,0	0/0:19,0:18:54.16:0,54,711	0/0:17,0:13:39.12:0,39,523	1/1:25,0:22:26.21:595,26,0	0/0:14,0:8:7.69:0,8,122
chr10	50741167	.	AG	A	6202.09	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=12.462;DP=717;FS=1.615;HRun=1;HaplotypeScore=48.2090;InbreedingCoeff=0.9880;MQ=45.87;MQ0=173;MQRankSum=-2.856;QD=25.42;ReadPosRankSum=2.127;VQSLOD=4.8466;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,25:27:66.03:954,66,0	0/0:13,0:12:36.12:0,36,511	0/0:10,0:6:17.93:0,18,230	0/0:9,0:6:9.03:0,9,114	0/0:36,0:23:60.02:0,60,787	1/1:7,22:22:54.18:747,54,0	1/1:3,18:19:26.51:677,27,0	0/0:63,0:27:74.74:0,75,1013	1/1:8,15:15:39.13:542,39,0	0/0:29,0:21:60.16:0,60,831	0/0:17,0:14:39.12:0,39,540	1/1:5,22:20:54.18:750,54,0	1/1:8,17:18:39.13:542,39,0	0/0:19,0:13:36.10:0,36,483	0/0:17,0:17:48.16:0,48,684	0/0:21,0:17:48.16:0,48,672	0/0:40,0:27:66.19:0,66,907	0/0:24,0:20:54.15:0,54,730	0/0:25,0:11:30.07:0,30,392	0/0:29,1:25:33.49:0,33,983	0/0:15,0:7:18.06:0,18,256	1/1:5,21:21:42.14:585,42,0	1/1:7,18:17:51.17:710,51,0	1/1:15,18:24:39.34:695,39,0	0/0:28,0:22:61.27:0,61,822	0/0:27,0:20:60.20:0,60,856	0/0:30,0:21:63.21:0,63,897	0/0:20,0:11:33.11:0,33,470
chr10	50742562	.	GAGAGA	G	158.19	PASS	AB=0.971;AC=9;AF=0.161;AN=56;BaseQRankSum=7.013;DP=512;FS=2.005;HRun=0;HaplotypeScore=103.9465;InbreedingCoeff=0.1920;MQ=62.88;MQ0=21;MQRankSum=-4.867;QD=1.48;ReadPosRankSum=0.472;VQSLOD=1.9424;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,1:35:25.71:0,26,343	0/0:7,0:7:19.31:0,19,309	0/0:36,0:14:39.99:0,40,458	0/0:47,0:16:42.11:0,42,507	0/0:19,0:19:42.14:0,42,671	0/0:16,0:16:40.04:0,40,220	0/0:24,0:23:52.56:0,53,364	0/1:28,0:27:50.01:50,0,273	0/0:11,0:12:3.22:0,3,145	0/0:22,0:21:48.89:0,49,789	0/0:14,0:13:30.10:0,30,447	0/0:12,1:13:1.07:0,1,155	0/1:20,3:24:64.41:64,0,185	0/0:16,0:16:33.11:0,33,766	0/0:7,0:7:18.06:0,18,346	0/0:12,0:11:0.75:0,1,2	0/0:26,0:24:60.58:0,61,763	0/0:12,0:10:28.33:0,28,407	0/1:6,0:5:23.24:23,0,29	1/1:5,0:5:2.94:18,3,0	1/1:9,0:8:2.99:23,3,0	0/0:14,0:14:29.25:0,29,188	0/0:16,0:16:37.98:0,38,271	0/1:20,0:18:2.36:2,0,144	0/0:27,0:26:54.16:0,54,839	0/0:14,0:14:36.48:0,36,586	0/1:15,0:15:99:105,0,225	0/0:15,0:14:42.13:0,42,532
chr10	50745020	.	G	GCA	11305.87	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-14.840;DP=627;FS=21.605;HRun=0;HaplotypeScore=69.0890;InbreedingCoeff=0.9636;MQ=77.35;MQ0=0;MQRankSum=1.116;QD=44.69;ReadPosRankSum=1.978;VQSLOD=3.9561;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,24:28:60.21:1080,60,0	1/1:2,9:11:24.08:432,24,0	0/0:15,0:16:22.50:0,23,298	0/0:10,0:10:0.65:0,1,164	0/0:19,0:19:54.16:0,54,738	1/1:1,20:21:45.15:810,45,0	1/1:2,22:24:54.19:972,54,0	0/0:27,0:27:63.19:0,63,863	1/1:1,24:26:66.23:1188,66,0	0/0:24,0:24:69.23:0,69,955	0/0:11,0:11:33.11:0,33,461	1/1:1,22:24:66.23:1184,66,0	1/1:0,30:30:84.29:1512,84,0	0/0:22,0:22:66.22:0,66,923	1/1:0,15:16:45.15:807,45,0	0/0:19,0:19:54.18:0,54,756	0/0:54,0:53:99:0,153,2124	0/0:29,0:29:84.28:0,84,1174	0/0:22,0:22:57.17:0,57,763	0/0:20,0:20:51.14:0,51,678	0/0:29,0:29:81.25:0,81,1116	1/1:4,25:29:75.26:1350,75,0	1/1:3,5:8:18.05:295,18,0	1/1:3,31:36:93.32:1675,93,0	0/0:10,0:10:30.10:0,30,419	0/0:17,0:17:48.16:0,48,672	0/0:34,0:33:99:0,99,1368	0/0:11,0:11:33.11:0,33,462
chr10	50745669	.	C	CTCTTTCTT	10356.67	PASS	AC=34;AF=0.654;AN=52;BaseQRankSum=5.113;DP=633;FS=2.111;HRun=0;HaplotypeScore=166.3427;InbreedingCoeff=0.9411;MQ=60.70;MQ0=2;MQRankSum=-8.958;QD=27.77;ReadPosRankSum=-0.828;VQSLOD=4.4345;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:26:27.05:454,27,0	1/1:8,0:8:12.02:240,12,0	./.	./.	0/0:26,0:26:33.02:0,33,629	1/1:24,0:25:36.11:828,36,0	1/1:21,0:21:20.96:281,21,0	1/1:36,0:36:2.92:17,3,0	1/1:16,0:16:21.07:471,21,0	0/0:25,0:25:30.09:0,30,658	0/0:25,0:25:33.09:0,33,677	1/1:17,5:22:51.13:1710,51,0	1/1:20,1:24:30.10:724,30,0	0/0:16,0:16:24.07:0,24,531	1/1:18,0:18:24.43:570,24,0	1/1:16,4:20:27.09:821,27,0	0/0:32,0:32:42.11:0,42,787	0/0:29,0:29:16.27:0,16,995	1/1:20,0:21:16.79:125,17,0	1/1:24,5:29:42.12:1154,42,0	1/1:15,0:17:14.57:106,15,0	1/1:23,1:26:27.05:640,27,0	1/1:16,3:19:30.56:800,31,0	1/1:19,0:19:6.02:171,6,0	0/0:28,0:29:42.14:0,42,934	0/0:35,0:35:60.17:0,60,1301	1/1:18,6:26:45.06:1244,45,0	0/0:18,0:17:27.08:0,27,607
chr10	50745714	.	T	TCTTTCTTC	5841.67	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=4.375;DP=609;FS=1.193;HRun=0;HaplotypeScore=177.0976;InbreedingCoeff=-0.0950;MQ=54.69;MQ0=6;MQRankSum=-7.432;QD=19.22;ReadPosRankSum=-2.327;VQSLOD=4.1293;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:24:99:432,0,108	1/1:6,1:7:20.97:300,21,0	0/0:14,0:6:18.02:0,18,174	0/0:12,0:6:14.49:0,14,117	0/0:29,0:29:77.82:0,78,1106	0/1:20,0:20:99:192,0,186	0/1:19,0:19:31.25:31,0,194	0/0:37,0:37:48.99:0,49,659	0/1:21,0:21:7.38:7,0,312	0/0:28,0:28:74.51:0,75,1183	0/0:20,0:20:48.08:0,48,861	0/1:28,0:28:99:963,0,240	0/1:22,0:22:99:324,0,209	0/0:14,0:14:42.04:0,42,692	1/1:15,3:18:39.68:752,40,0	0/1:22,0:22:99:453,0,246	0/0:26,0:26:68.18:0,68,1033	0/0:31,0:31:30.04:0,30,1326	0/1:21,0:19:99:137,0,202	0/1:30,0:30:99:827,0,293	0/1:10,0:10:64.17:64,0,72	0/1:19,0:19:99:307,0,234	0/1:14,0:14:49.85:332,0,50	0/0:17,0:17:16.73:0,17,268	0/0:19,0:19:51.13:0,51,1152	0/0:37,0:37:99:0,102,1775	0/1:29,0:29:99:720,0,278	0/0:21,0:21:63.03:0,63,999
chr10	50745745	.	GTTT	G	4554.33	PASS	AB=0.552;AC=19;AF=0.339;AN=56;BaseQRankSum=1.782;DP=622;FS=2.259;HRun=12;HaplotypeScore=107.2579;InbreedingCoeff=0.9229;MQ=63.06;MQ0=5;MQRankSum=-1.429;QD=23.84;ReadPosRankSum=2.858;VQSLOD=4.0331;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,16:20:37.41:478,37,0	0/0:0,0:7:6.70:0,7,14	0/0:37,0:16:34.63:0,35,498	0/0:31,0:16:29.86:0,30,364	0/0:31,0:33:93.29:0,93,1703	1/1:3,22:25:54.15:662,54,0	1/1:2,17:19:45.06:548,45,0	0/0:8,0:30:62.81:0,63,523	1/1:3,17:20:45.12:565,45,0	0/0:27,0:27:66.22:0,66,1254	0/0:26,0:26:70.45:0,70,1190	1/1:6,16:22:39.06:493,39,0	1/1:4,17:21:42.09:527,42,0	0/0:17,0:17:39.03:0,39,671	0/1:3,0:16:4.33:4,0,31	0/0:4,0:26:53.05:0,53,434	0/0:27,0:27:56.36:0,56,1281	0/0:22,0:22:54.16:0,54,1027	0/0:4,0:12:25.18:0,25,223	0/0:3,0:24:59.92:0,60,465	0/0:4,0:7:14.98:0,15,137	1/1:0,16:16:44.04:562,44,0	1/1:3,10:13:15.02:186,15,0	1/1:2,17:19:41.46:529,41,0	0/0:20,0:23:48.12:0,48,826	0/0:31,0:33:76.46:0,76,1352	0/0:5,0:25:53.81:0,54,429	0/0:24,0:24:69.24:0,69,1346
chr10	50746189	.	TA	T	5089.37	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=13.774;DP=501;FS=2.212;HRun=1;HaplotypeScore=47.9788;InbreedingCoeff=0.9964;MQ=72.19;MQ0=0;MQRankSum=0.226;QD=34.62;ReadPosRankSum=2.116;VQSLOD=4.7261;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,27:27:63.21:878,63,0	0/0:8,0:8:24.05:0,24,307	0/0:15,0:15:42.09:0,42,497	0/0:7,0:7:18:0,18,199	0/0:26,0:26:78.19:0,78,1038	1/1:0,20:20:54.18:753,54,0	1/1:1,17:18:35.75:539,36,0	0/0:33,0:33:99:0,99,1383	1/1:0,23:23:63.21:878,63,0	0/0:17,0:17:51.16:0,51,713	0/0:13,0:13:39.13:0,39,557	1/1:0,13:13:30.10:417,30,0	1/1:0,13:13:33.11:460,33,0	0/0:15,0:15:45.09:0,45,569	0/0:12,0:12:36.11:0,36,497	0/0:16,0:16:48.13:0,48,649	0/0:26,0:26:78.18:0,78,1062	0/0:22,0:22:60.17:0,60,832	0/0:16,0:16:48.14:0,48,655	0/0:29,0:29:87.28:0,87,1225	0/0:6,0:6:18.04:0,18,238	1/1:0,9:9:27.05:350,27,0	1/1:0,16:16:35.96:502,36,0	1/1:1,7:8:24.03:312,24,0	0/0:25,0:25:75.24:0,75,1053	0/0:27,0:27:81.23:0,81,1090	0/0:26,0:26:78.21:0,78,1056	0/0:15,0:15:39.60:0,40,557
chr10	50746293	.	CT	C	4118.21	PASS	AB=0.972;AC=23;AF=0.411;AN=56;BaseQRankSum=11.864;DP=553;FS=3.153;HRun=9;HaplotypeScore=63.9973;InbreedingCoeff=0.9152;MQ=75.89;MQ0=1;MQRankSum=-0.386;QD=19.33;ReadPosRankSum=3.597;VQSLOD=4.2966;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,22:27:63.03:577,63,0	1/1:1,3:4:9:82,9,0	0/1:33,1:22:8.34:8,0,185	0/0:32,0:19:23.93:0,24,172	0/0:27,1:28:47.76:0,48,801	1/1:0,26:26:75.04:686,75,0	1/1:1,8:9:24.01:220,24,0	0/0:29,0:29:72.21:0,72,831	1/1:2,22:24:63.03:577,63,0	0/0:17,0:17:44.80:0,45,496	0/0:22,0:22:54.16:0,54,623	1/1:0,7:7:9:82,9,0	1/1:2,16:18:42.02:384,42,0	0/0:12,0:12:33.08:0,33,371	1/1:1,16:17:42.02:384,42,0	0/0:8,0:8:21.06:0,21,242	0/0:34,0:34:96.20:0,96,1069	0/0:17,0:17:39.12:0,39,449	0/0:16,0:16:34.79:0,35,413	0/0:24,0:24:63.14:0,63,704	0/0:9,0:9:18.05:0,18,208	1/1:0,17:17:51.03:466,51,0	1/1:2,18:20:51:460,51,0	1/1:0,9:9:21.01:192,21,0	0/0:27,1:29:50.59:0,51,809	0/0:26,1:27:44.74:0,45,760	0/0:27,0:27:75.19:0,75,846	0/0:8,0:7:21.06:0,21,242
chr10	50747178	.	TG	T	113.54	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=5.956;DP=499;FS=10.958;HRun=1;HaplotypeScore=63.0966;InbreedingCoeff=0.6655;MQ=60.63;MQ0=1;MQRankSum=-0.279;QD=8.11;ReadPosRankSum=0.400;VQSLOD=-0.3523;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:93.27:0,93,1422	0/1:2,0:2:0.17:0,0,19	0/0:9,0:6:17.90:0,18,225	0/0:5,0:5:12.04:0,12,160	0/0:13,0:13:39.11:0,39,592	0/0:32,0:32:90.29:0,90,1389	0/0:22,0:22:66.22:0,66,1028	0/0:34,0:34:99:0,102,1545	0/0:26,0:26:78.27:0,78,1246	0/0:17,0:17:51.17:0,51,789	0/0:23,0:23:69.22:0,69,1081	0/0:28,0:28:84.26:0,84,1274	0/0:28,0:28:84.29:0,84,1324	0/0:17,0:17:51.17:0,51,810	1/1:7,5:12:8.66:196,9,0	0/0:34,0:34:99:0,102,1597	0/0:21,0:21:56.24:0,56,902	0/0:17,0:17:51.13:0,51,764	0/0:14,0:14:42.14:0,42,666	0/0:14,0:14:42.14:0,42,671	0/0:9,0:9:27.09:0,27,426	0/0:3,0:3:9.03:0,9,137	0/0:6,0:6:18.05:0,18,265	0/0:17,0:17:51.17:0,51,808	0/0:14,0:14:42.14:0,42,666	0/0:20,0:20:60.20:0,60,960	0/0:20,0:20:60.18:0,60,927	0/0:11,0:11:33.11:0,33,510
chr10	50747180	.	ATG	A	194	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=5.757;DP=498;FS=7.725;HRun=0;HaplotypeScore=73.7844;InbreedingCoeff=0.6930;MQ=61.06;MQ0=1;MQRankSum=-0.085;QD=12.12;ReadPosRankSum=-0.108;VQSLOD=2.5069;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:93.32:0,93,1774	0/1:3,0:3:3.45:3,0,22	0/0:9,0:6:18.04:0,18,271	0/0:6,0:6:18.05:0,18,218	0/0:14,0:14:42.14:0,42,783	0/0:30,0:30:87.29:0,87,1635	0/0:22,0:22:66.20:0,66,1233	0/0:31,0:31:93.30:0,93,1683	0/0:26,0:26:78.27:0,78,1568	0/0:17,0:17:51.15:0,51,958	0/0:23,0:23:69.22:0,69,1357	0/0:25,0:25:75.26:0,75,1436	0/0:29,0:29:87.30:0,87,1632	0/0:17,0:17:51.17:0,51,1004	1/1:8,5:13:20.16:285,20,0	0/0:34,0:34:99:0,102,1993	0/0:23,0:23:48.13:0,48,1222	0/0:16,0:16:45.15:0,45,851	0/0:14,0:14:42.14:0,42,822	0/0:14,0:14:42.14:0,42,839	0/0:9,0:9:27.09:0,27,523	0/0:4,0:4:12.04:0,12,194	0/0:5,0:5:15.05:0,15,300	0/0:17,0:17:51.17:0,51,988	0/0:14,0:14:42.14:0,42,823	0/0:20,0:20:60.21:0,60,1211	0/0:20,0:20:60.12:0,60,1123	0/0:11,0:11:30.07:0,30,525
chr10	50747643	.	AGGAAGG	A	6126.91	PASS	AB=0.947;AC=19;AF=0.339;AN=56;BaseQRankSum=11.951;DP=466;FS=10.876;HRun=0;HaplotypeScore=118.1589;InbreedingCoeff=0.8661;MQ=49.15;MQ0=18;MQRankSum=-11.071;QD=43.45;ReadPosRankSum=-1.452;VQSLOD=4.0578;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,8:23:55.39:917,55,0	0/0:3,0:3:6.01:0,6,62	0/0:34,0:7:21.07:0,21,651	0/0:51,0:9:21.07:0,21,539	0/0:15,0:15:45.15:0,45,1510	1/1:0,21:21:54.18:1191,54,0	1/1:8,6:14:16.11:628,16,0	0/0:26,0:25:69.67:0,70,1677	1/1:2,6:8:24.04:492,24,0	0/0:13,0:13:39.13:0,39,1217	0/0:5,0:5:15.05:0,15,478	1/1:3,7:11:33.08:610,33,0	1/1:2,9:11:30.10:621,30,0	0/0:12,0:12:36.12:0,36,1134	0/0:16,0:16:42.13:0,42,895	0/0:15,0:15:42.14:0,42,1300	0/1:17,0:18:14.07:14,0,1469	0/0:19,0:19:54.61:0,55,1798	0/0:14,0:10:30.08:0,30,840	0/0:13,0:12:36.09:0,36,882	0/0:30,0:30:60.16:0,60,1607	1/1:4,8:12:1.61:641,2,0	1/1:1,7:8:23.99:403,24,0	1/1:2,8:15:30.10:610,30,0	0/0:19,0:19:57.16:0,57,1764	0/0:16,0:16:48.16:0,48,1711	0/0:13,0:13:36.12:0,36,1133	0/0:9,0:9:17.10:0,17,743
chr10	50747646	.	A	AGG	1573.94	PASS	AB=0.878;AC=18;AF=0.321;AN=56;BaseQRankSum=12.553;DP=463;FS=17.190;HRun=2;HaplotypeScore=105.6627;InbreedingCoeff=0.8181;MQ=47.82;MQ0=17;MQRankSum=-10.384;QD=12.39;ReadPosRankSum=-1.929;VQSLOD=-0.7649;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:21:27.43:399,27,0	0/0:3,0:3:6.02:0,6,77	0/0:35,0:8:23.95:0,24,332	0/0:52,0:9:24.03:0,24,305	0/0:17,0:17:48.14:0,48,726	1/1:21,0:21:40.75:228,41,0	0/1:11,2:13:8.23:237,0,8	0/0:26,0:25:63.03:0,63,850	1/1:8,0:8:14.05:65,14,0	0/0:13,0:13:39.13:0,39,617	0/0:6,0:6:18.05:0,18,249	1/1:9,1:10:14.88:126,15,0	1/1:11,0:11:25.42:217,25,0	0/0:12,0:12:36.11:0,36,551	0/0:16,0:16:42.13:0,42,624	0/0:16,0:16:29.19:0,29,651	0/0:18,0:18:41.11:0,41,702	0/0:18,0:18:50.51:0,51,819	0/0:15,0:12:32.99:0,33,442	0/0:13,0:12:32.80:0,33,473	0/0:29,0:29:53.68:0,54,806	1/1:13,0:13:9.40:157,9,0	1/1:7,0:7:14.15:56,14,0	1/1:14,1:15:27.35:284,27,0	0/0:16,0:16:48.16:0,48,772	0/0:17,0:17:51.16:0,51,808	0/0:13,0:13:36.12:0,36,584	0/1:7,0:8:10.26:10,0,312
chr10	50747650	.	A	AG	1521.15	PASS	AB=0.938;AC=18;AF=0.321;AN=56;BaseQRankSum=12.449;DP=455;FS=22.102;HRun=2;HaplotypeScore=99.8188;InbreedingCoeff=0.8101;MQ=48.45;MQ0=15;MQRankSum=-10.909;QD=11.61;ReadPosRankSum=-2.252;VQSLOD=0.4414;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:17,5:22:28.57:429,29,0	0/0:3,0:3:5.89:0,6,36	0/0:29,0:7:21.06:0,21,264	0/0:48,0:7:21.03:0,21,254	0/0:16,0:16:45.15:0,45,584	1/1:21,0:21:35.22:258,35,0	0/1:12,2:14:6.44:142,0,6	0/0:24,0:23:60.12:0,60,688	1/1:8,0:8:13.33:141,13,0	0/0:13,0:13:36.12:0,36,466	0/0:6,0:6:18.06:0,18,233	1/1:8,2:10:6.59:139,7,0	1/1:12,0:12:16.58:111,17,0	0/0:11,0:11:33.11:0,33,428	0/0:18,0:18:42:0,42,402	0/0:16,0:16:41.92:0,42,508	0/0:20,0:20:50.08:0,50,626	0/0:18,0:18:50.70:0,51,661	0/0:14,0:13:26.36:0,26,438	0/0:11,0:11:30.05:0,30,370	0/0:29,0:28:51.10:0,51,611	1/1:13,0:13:1.39:154,1,0	1/1:8,0:8:13.91:95,14,0	1/1:11,4:15:27.57:246,28,0	0/0:16,0:16:48.16:0,48,623	0/0:18,0:18:51.17:0,51,661	0/0:14,0:14:36.11:0,36,437	0/1:8,0:8:0.01:0,0,213
chr10	50747653	.	GGAA	G	3695.71	PASS	AB=0.833;AC=18;AF=0.321;AN=56;BaseQRankSum=11.786;DP=449;FS=23.574;HRun=0;HaplotypeScore=102.7672;InbreedingCoeff=0.8087;MQ=48.82;MQ0=14;MQRankSum=-10.720;QD=27.58;ReadPosRankSum=-1.996;VQSLOD=1.7429;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:14,8:22:46.36:532,46,0	0/0:3,0:3:6.02:0,6,74	0/0:28,0:7:18.03:0,18,247	0/0:44,0:7:21.02:0,21,276	0/0:15,0:15:45.12:0,45,884	1/1:6,15:21:53.98:764,54,0	0/1:6,6:12:40.66:304,0,41	0/0:24,0:23:14.92:0,15,535	1/1:1,8:9:24.04:347,24,0	0/0:12,0:12:32.98:0,33,645	0/0:7,0:7:21.07:0,21,469	1/1:2,7:9:27.07:359,27,0	1/1:4,7:11:27.36:334,27,0	0/0:11,0:11:30.05:0,30,578	0/0:17,0:17:18.26:0,18,471	0/0:15,0:15:30.98:0,31,419	0/0:21,0:21:44.60:0,45,1037	0/0:19,0:19:54.19:0,54,1217	0/1:16,0:15:23.28:23,0,320	0/0:11,0:11:30:0,30,372	0/0:29,0:28:51.02:0,51,637	1/1:5,6:11:12.52:329,13,0	1/1:0,8:8:21.07:319,21,0	1/1:12,3:15:30.52:386,31,0	0/0:16,0:16:48.12:0,48,875	0/0:19,0:19:51.17:0,51,1099	0/0:15,0:15:30.10:0,30,420	0/0:8,0:8:22.63:0,23,482
chr10	50747656	.	A	AGAG	7909.47	PASS	AB=1.000;AC=33;AF=0.589;AN=56;BaseQRankSum=2.232;DP=453;FS=20.591;HRun=0;HaplotypeScore=90.7395;InbreedingCoeff=0.8914;MQ=49.33;MQ0=13;MQRankSum=-6.596;QD=30.66;ReadPosRankSum=-2.500;VQSLOD=2.9635;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,9:21:33.92:621,34,0	1/1:1,2:3:6.02:124,6,0	0/0:25,0:5:8.99:0,9,90	0/0:43,0:8:8.92:0,9,98	0/0:15,0:15:39.09:0,39,517	1/1:21,0:21:47.80:597,48,0	0/1:13,0:13:19.16:270,0,19	1/1:12,12:25:36.11:640,36,0	1/1:9,1:10:23.90:309,24,0	0/0:11,0:11:24.08:0,24,338	0/0:7,0:7:21.07:0,21,309	1/1:9,1:10:28.12:293,28,0	1/1:9,3:13:23.35:242,23,0	0/0:11,0:11:27.05:0,27,341	1/1:4,13:17:30.10:597,30,0	1/1:2,12:14:27.09:557,27,0	0/0:21,0:22:27.18:0,27,642	0/0:18,0:18:54.18:0,54,778	1/1:5,12:18:42.08:663,42,0	1/1:2,10:12:30.03:553,30,0	1/1:5,24:30:45.15:932,45,0	1/1:8,3:12:23.67:270,24,0	1/1:8,0:8:18.84:216,19,0	1/1:10,4:14:30.05:466,30,0	0/0:16,0:16:30.10:0,30,442	0/0:18,0:18:42.13:0,42,584	1/1:2,12:14:27.09:558,27,0	0/0:8,0:8:22.32:0,22,311
chr10	50750524	.	AGC	A	1090.71	PASS	AB=0.848;AC=13;AF=0.232;AN=56;BaseQRankSum=-4.644;DP=348;FS=1.918;HRun=0;HaplotypeScore=58.3162;InbreedingCoeff=0.6103;MQ=66.05;MQ0=21;MQRankSum=-3.135;QD=8.66;ReadPosRankSum=-1.809;VQSLOD=3.0264;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:15:3.28:0,3,146	0/0:13,0:12:19.54:0,20,163	0/0:21,0:16:47.50:0,48,365	0/0:33,0:18:36.70:0,37,352	0/0:9,0:9:8.49:0,8,113	0/0:6,0:5:14.80:0,15,107	0/0:6,0:6:1.33:0,1,81	1/1:19,0:19:44.45:380,44,0	0/0:11,0:10:20.18:0,20,155	0/0:9,0:9:19.19:0,19,164	0/0:5,0:5:6.01:0,6,77	0/0:8,0:7:14.70:0,15,102	0/0:4,0:4:8.81:0,9,58	0/0:12,0:12:14.50:0,14,89	0/0:20,0:18:15.41:0,15,246	0/1:3,15:17:15.33:82,0,15	0/1:14,0:13:7.17:7,0,120	0/0:7,0:7:8.93:0,9,64	1/1:10,0:9:23.46:206,23,0	1/1:12,0:10:18.44:149,18,0	1/1:21,0:17:15.90:106,16,0	0/0:5,0:5:11.83:0,12,87	0/0:8,0:8:17.88:0,18,119	0/0:6,0:5:8.99:0,9,73	0/0:12,0:12:27.35:0,27,233	0/1:7,0:7:0.87:1,0,79	1/1:25,0:23:15.36:331,15,0	0/0:11,0:9:19.54:0,20,128
chr10	50752137	.	AACACACAC	A	1155.85	PASS	AB=0.825;AC=14;AF=0.269;AN=52;BaseQRankSum=7.543;DP=643;FS=27.924;HRun=0;HaplotypeScore=180.5975;InbreedingCoeff=0.2794;MQ=55.86;MQ0=8;MQRankSum=-7.293;QD=4.28;ReadPosRankSum=-1.010;VQSLOD=1.0304;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:26:8.04:8,0,70	1/1:7,3:10:5.98:95,6,0	./.	./.	0/0:17,0:20:30.10:0,30,927	0/0:18,0:19:18.02:0,18,227	0/0:17,0:21:6.01:0,6,87	0/0:19,0:19:5.23:0,5,80	0/0:18,0:25:23.36:0,23,235	0/0:23,0:23:30.05:0,30,764	0/0:15,0:16:30.09:0,30,853	1/1:21,9:29:15:318,15,0	0/1:19,6:26:52.42:417,0,52	0/0:29,0:31:42.13:0,42,1308	1/1:26,9:38:19.97:249,20,0	0/1:32,1:46:24.66:127,0,25	0/0:19,0:20:39.13:0,39,1335	0/0:14,0:15:27.08:0,27,900	1/1:17,0:18:2.90:16,3,0	0/0:16,1:19:14.87:0,15,124	0/0:40,0:39:4.61:0,5,126	0/1:20,4:26:48.07:48,0,106	0/0:11,0:13:3.01:0,3,36	0/1:21,1:34:12.24:12,0,19	0/0:14,0:14:15.04:0,15,450	0/0:17,0:16:23.76:0,24,536	0/1:13,0:16:24.27:24,0,27	0/0:13,0:13:21.07:0,21,614
chr10	50756422	.	C	CT	1784.88	PASS	AB=0.856;AC=21;AF=0.375;AN=56;BaseQRankSum=-8.822;DP=655;FS=10.293;HRun=15;HaplotypeScore=86.3920;InbreedingCoeff=0.2862;MQ=74.77;MQ0=0;MQRankSum=-0.294;QD=4.59;ReadPosRankSum=-0.202;VQSLOD=1.1172;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,34:45:5.48:279,5,0	0/0:3,0:12:16.03:0,16,46	0/1:22,1:17:13.36:13,0,35	0/1:23,0:14:7.78:8,0,32	0/0:22,1:23:19.22:0,19,195	1/1:11,18:28:9.06:272,9,0	1/1:8,21:31:34.94:419,35,0	0/0:13,0:33:41.37:0,41,129	1/1:5,17:22:32.92:270,33,0	0/1:21,0:22:7.35:7,0,151	0/1:17,1:20:13.85:14,0,137	0/1:8,11:19:14.35:95,0,14	0/1:10,12:22:9.13:42,0,9	0/1:24,2:26:20.57:21,0,92	0/0:5,0:24:25.22:0,25,88	0/0:6,0:23:26.73:0,27,78	0/1:35,1:36:0.77:1,0,257	0/0:19,0:19:41.01:0,41,251	0/0:13,0:21:23.89:0,24,87	0/0:8,0:23:4.35:0,4,40	0/0:4,0:11:10.12:0,10,29	1/1:7,8:15:8.63:89,9,0	0/1:9,14:24:1.74:184,0,2	1/1:5,21:27:17.80:248,18,0	0/0:16,2:18:6.17:0,6,141	0/0:14,0:15:3.18:0,3,72	0/0:8,0:28:28.09:0,28,81	0/0:15,0:16:0.40:0,0,106
chr10	50758151	.	C	CT	108.54	PASS	AC=4;AF=0.074;AN=54;BaseQRankSum=-0.236;DP=326;FS=0.000;HRun=9;HaplotypeScore=36.4363;InbreedingCoeff=0.8052;MQ=78.76;MQ0=1;MQRankSum=-0.430;QD=13.57;ReadPosRankSum=-2.435;VQSLOD=2.0003;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:22.73:0,23,273	1/1:1,3:4:11.95:116,12,0	0/0:17,0:13:12.34:0,12,149	0/0:15,0:12:8.90:0,9,150	0/0:12,0:12:35.01:0,35,288	0/0:6,0:6:17.98:0,18,153	0/0:4,0:5:11.01:0,11,79	0/0:29,0:29:62.96:0,63,545	0/0:14,0:14:41.83:0,42,352	0/0:9,0:9:26.99:0,27,234	0/0:13,0:13:32.98:0,33,286	0/0:14,0:14:41.98:0,42,360	0/0:5,0:5:15:0,15,130	0/0:10,0:10:26.98:0,27,234	1/1:0,4:4:9.02:100,9,0	0/0:7,0:7:20.99:0,21,180	0/0:27,0:27:74.97:0,75,648	0/0:26,0:26:71.98:0,72,625	0/0:15,0:15:26.95:0,27,232	0/0:13,0:13:35.92:0,36,304	./.	0/0:2,0:2:6:0,6,52	0/0:10,0:10:29.99:0,30,260	0/0:3,0:3:9:0,9,78	0/0:12,0:12:35.99:0,36,310	0/0:16,0:16:44.99:0,45,391	0/0:10,0:10:29.99:0,30,260	0/0:13,0:13:32.95:0,33,280
chr10	50758797	.	G	GTTT	1844.31	PASS	AB=0.643;AC=15;AF=0.268;AN=56;BaseQRankSum=10.699;DP=693;FS=5.053;HRun=9;HaplotypeScore=113.4630;InbreedingCoeff=0.9124;MQ=77.23;MQ0=0;MQRankSum=-1.120;QD=9.36;ReadPosRankSum=-1.288;VQSLOD=0.1665;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:31:87.17:0,87,1051	1/1:1,16:17:29.87:591,30,0	0/0:24,0:24:45:0,45,526	0/0:19,0:19:27.09:0,27,359	0/0:29,0:30:84.14:0,84,1012	0/0:25,0:25:69.19:0,69,872	0/0:19,0:19:48.12:0,48,606	1/1:8,0:34:30.40:83,30,0	0/0:20,0:20:54.15:0,54,682	0/0:35,0:36:99:0,99,1219	0/0:30,0:30:81.15:0,81,962	0/0:21,0:21:60.16:0,60,731	0/0:23,0:23:66.21:0,66,834	0/0:19,0:20:52.69:0,53,637	1/1:2,20:23:54.19:1061,54,0	1/1:3,0:25:17.28:45,17,0	0/0:17,0:17:42.06:0,42,512	0/0:13,0:13:36.06:0,36,437	1/1:4,0:22:27.01:81,27,0	1/1:4,0:31:37.59:126,38,0	0/1:8,0:18:11.29:11,0,22	0/0:21,0:21:54.15:0,54,682	0/0:27,0:28:70.76:0,71,880	0/0:23,0:23:66.15:0,66,801	0/0:41,0:42:99:0,114,1394	0/0:27,0:27:41.04:0,41,748	1/1:5,0:27:21.18:45,21,0	0/0:26,0:26:63.13:0,63,796
chr10	50759607	.	GTATTTGAAGA	G	2503.80	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.207;DP=688;FS=1.613;HRun=0;HaplotypeScore=214.1784;InbreedingCoeff=0.9958;MQ=80.76;MQ0=0;MQRankSum=-8.532;QD=78.24;ReadPosRankSum=0.758;VQSLOD=3.5751;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:57.20:0,57,3045	1/1:0,6:6:18.06:610,18,0	0/0:16,0:16:48.13:0,48,2182	0/0:20,0:20:60.21:0,60,2570	0/0:37,0:37:99:0,108,5577	0/0:37,0:37:99:0,105,5404	0/0:19,0:19:54.18:0,54,2586	0/0:29,0:29:87.28:0,87,4268	0/0:28,0:28:84.29:0,84,4436	0/0:26,0:26:75.26:0,75,3886	0/0:40,0:40:99:0,120,6309	0/0:19,0:19:54.19:0,54,2631	0/0:21,0:21:63.22:0,63,3238	0/0:23,0:23:69.24:0,69,3368	1/1:1,25:26:60.21:2014,60,0	0/0:24,0:24:72.25:0,72,3370	0/0:29,0:29:87.30:0,87,4482	0/0:18,0:18:54.19:0,54,2735	0/0:19,0:19:54.19:0,54,2769	0/0:27,0:27:81.28:0,81,4301	0/0:24,0:24:69.24:0,69,3714	0/0:33,0:33:99:0,99,5134	0/0:31,0:31:87.30:0,87,4507	0/0:19,0:19:57.20:0,57,2886	0/0:16,0:16:48.16:0,48,2540	0/0:30,0:30:87.29:0,87,4276	0/0:38,0:38:99:0,114,5744	0/0:14,0:14:42.14:0,42,2170
chr10	50761404	.	A	ATACTC	10616.71	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-12.418;DP=690;FS=5.683;HRun=0;HaplotypeScore=134.5456;InbreedingCoeff=0.9816;MQ=89.62;MQ0=0;MQRankSum=-8.141;QD=72.72;ReadPosRankSum=-3.093;VQSLOD=5.4828;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,111,2227	0/0:5,0:4:12.04:0,12,249	0/0:28,0:28:57.19:0,57,1163	0/0:26,0:26:75.21:0,75,1405	0/0:29,0:29:78.27:0,78,1609	0/0:27,0:26:60.21:0,60,1244	0/0:27,0:27:75.26:0,75,1517	1/1:15,25:40:99:3069,108,0	0/0:29,0:29:84.29:0,84,1741	0/0:21,0:21:54.19:0,54,1119	0/0:14,0:14:36.12:0,36,746	0/0:30,0:30:81.22:0,81,1558	0/0:30,0:30:81.28:0,81,1678	0/0:24,0:24:69.24:0,69,1430	0/0:33,0:33:93.32:0,93,1928	1/1:4,28:32:25.10:2516,25,0	0/0:29,0:29:84.27:0,84,1702	0/0:30,0:30:87.30:0,87,1792	1/1:3,10:16:45.10:1027,45,0	1/1:7,14:21:48.16:1454,48,0	1/1:3,12:15:27.09:829,27,0	0/0:21,0:21:57.20:0,57,1181	0/0:25,0:25:69.24:0,69,1430	0/0:17,0:17:51.18:0,51,1057	0/0:23,0:23:69.19:0,69,1365	0/0:33,0:33:96.33:0,96,1990	1/1:4,17:22:60.18:1722,60,0	0/0:3,0:3:9.03:0,9,187
chr10	50761660	.	AACAC	A	1844.29	PASS	AB=1.000;AC=14;AF=0.269;AN=52;BaseQRankSum=2.478;DP=645;FS=0.000;HRun=0;HaplotypeScore=125.7344;InbreedingCoeff=0.8277;MQ=62.83;MQ0=10;MQRankSum=1.696;QD=10.79;ReadPosRankSum=-1.559;VQSLOD=2.7056;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:39:35.82:0,36,401	0/1:7,0:5:0:0,0,0	./.	./.	0/0:32,0:35:26.48:0,26,1239	0/0:17,0:34:30.10:0,30,433	0/0:17,0:22:18.03:0,18,204	1/1:18,6:24:14.91:160,15,0	0/0:14,0:14:9.03:0,9,128	0/0:19,0:19:30.09:0,30,638	0/0:18,0:19:29.53:0,30,546	0/0:18,0:29:24.33:0,24,354	0/0:12,0:19:15.05:0,15,226	0/0:23,0:23:47.62:0,48,866	0/0:19,0:19:15:0,15,192	1/1:11,11:23:24.04:336,24,0	0/0:23,1:28:11.47:0,11,1012	0/0:15,0:18:29.42:0,29,489	1/1:6,4:9:11.33:165,11,0	1/1:12,11:22:29.78:409,30,0	1/1:11,22:34:27.09:431,27,0	0/0:13,0:19:10.59:0,11,110	0/0:10,0:17:14.71:0,15,166	0/0:18,0:27:8.70:0,9,115	0/0:10,0:13:13.46:0,13,234	0/0:23,0:23:31.86:0,32,699	1/1:12,14:29:36.10:515,36,0	0/1:21,0:21:5.84:6,0,639
chr10	50761689	.	A	ACACACA	4180.92	PASS	AB=1.000;AC=21;AF=0.404;AN=52;BaseQRankSum=-0.789;DP=659;FS=3.482;HRun=0;HaplotypeScore=157.6362;InbreedingCoeff=0.8518;MQ=60.02;MQ0=10;MQRankSum=-9.201;QD=17.00;ReadPosRankSum=-7.193;VQSLOD=0.9842;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:44,0:44:26.41:557,26,0	0/1:7,0:5:0:0,0,0	./.	./.	0/0:36,0:35:29.19:0,29,655	1/1:28,0:28:42.01:843,42,0	1/1:24,0:24:12.03:256,12,0	0/0:30,0:29:4.72:0,5,32	1/1:10,4:15:12.04:278,12,0	0/0:19,0:19:24.07:0,24,426	0/0:22,0:21:8.13:0,8,351	1/1:26,0:26:24.08:576,24,0	1/1:21,0:21:23.65:606,24,0	0/0:22,0:22:37.32:0,37,581	1/1:22,0:22:18.53:410,19,0	0/0:15,0:15:21.07:0,21,293	0/0:29,0:29:51.17:0,51,949	0/0:15,0:15:2.70:0,3,473	0/0:26,0:25:7.26:0,7,79	0/0:26,0:25:19:0,19,250	0/0:36,0:36:27.08:0,27,346	1/1:15,0:15:5.80:141,6,0	1/1:16,0:16:17.90:376,18,0	1/1:28,0:26:6.02:137,6,0	0/0:14,0:14:15.03:0,15,228	0/0:24,0:24:23.89:0,24,335	0/0:26,0:26:35.99:0,36,493	0/0:18,0:18:28.43:0,28,516
chr10	50762118	.	AGAGAGAGAGAGAGC	A	4305.18	PASS	AB=1.000;AC=28;AF=0.500;AN=56;BaseQRankSum=-0.007;DP=572;FS=38.796;HRun=0;HaplotypeScore=160.5425;InbreedingCoeff=0.7753;MQ=59.42;MQ0=26;MQRankSum=0.705;QD=13.93;ReadPosRankSum=0.450;VQSLOD=2.6362;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:37,0:32:74.76:705,75,0	0/1:10,0:10:99:120,0,275	0/0:18,0:9:19.54:0,20,142	0/0:23,0:13:16.93:0,17,179	0/0:19,0:17:41.84:0,42,553	1/1:14,0:13:26.06:285,26,0	1/1:2,39:40:5.91:122,6,0	1/1:23,0:23:41.88:403,42,0	1/1:4,22:25:9.03:338,9,0	0/0:30,0:29:61.84:0,62,1252	0/0:10,0:9:14.94:0,15,214	1/1:14,0:13:28.62:400,29,0	1/1:13,0:12:26.32:417,26,0	0/0:29,0:29:35.57:0,36,640	0/0:23,0:23:9.50:0,10,316	1/1:15,1:16:12.01:290,12,0	0/0:26,0:25:60.53:0,61,1822	0/0:18,0:17:46.79:0,47,1034	1/1:14,0:12:15.15:163,15,0	1/1:11,0:11:13.61:144,14,0	1/1:21,0:20:21.66:237,22,0	1/1:13,1:12:7.67:242,8,0	0/0:12,0:11:0.47:0,0,1	0/1:36,0:34:99:190,0,226	0/0:16,0:15:38.78:0,39,569	0/0:26,0:24:64.06:0,64,1089	1/1:19,0:19:30.65:249,31,0	0/0:12,0:10:12.95:0,13,360
chr10	50762120	.	AGAGAGAGAGAGC	A	4242.30	PASS	AB=1.000;AC=30;AF=0.536;AN=56;BaseQRankSum=0.430;DP=555;FS=51.438;HRun=0;HaplotypeScore=140.1585;InbreedingCoeff=0.8519;MQ=60.22;MQ0=26;MQRankSum=3.221;QD=13.86;ReadPosRankSum=2.330;VQSLOD=2.1865;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:33,1:29:73.13:628,73,0	0/1:10,0:10:99:120,0,194	0/0:18,0:9:19.59:0,20,141	0/0:24,0:14:20.36:0,20,217	0/0:20,0:18:44.80:0,45,483	1/1:11,0:11:28.83:257,29,0	1/1:41,0:40:6.01:99,6,0	1/1:25,0:25:51.37:479,51,0	1/1:25,0:24:9.03:244,9,0	0/0:28,0:27:78.09:0,78,1056	0/0:10,0:9:17.77:0,18,176	1/1:13,1:13:26.54:318,27,0	1/1:10,2:11:23.91:329,24,0	0/0:28,0:28:32.31:0,32,548	0/0:23,0:23:9.50:0,10,243	1/1:2,14:16:12.01:347,12,0	0/0:27,0:25:60.52:0,61,1539	0/0:19,0:18:49.18:0,49,859	1/1:11,0:9:12.49:138,12,0	1/1:11,0:11:11.35:120,11,0	1/1:19,0:18:19.74:238,20,0	1/1:14,0:12:23.95:252,24,0	0/1:12,0:11:0:0,0,1	1/1:35,0:33:18.47:423,18,0	0/0:14,0:13:38.14:0,38,484	0/0:26,0:24:66.55:0,67,892	1/1:15,1:16:30.86:249,31,0	0/0:12,0:10:12.80:0,13,263
chr10	50762122	.	AGAGAGAGAGC	A	4322.46	PASS	AB=0.880;AC=30;AF=0.536;AN=56;BaseQRankSum=-0.125;DP=553;FS=39.525;HRun=0;HaplotypeScore=126.0354;InbreedingCoeff=0.7596;MQ=62.37;MQ0=24;MQRankSum=0.508;QD=13.85;ReadPosRankSum=2.447;VQSLOD=2.1913;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:32,0:29:61.13:574,61,0	0/1:11,0:11:99:145,0,119	0/0:20,0:11:24.96:0,25,191	0/0:24,0:14:19.56:0,20,213	0/0:20,0:18:41.47:0,41,394	1/1:11,0:11:26.34:207,26,0	1/1:41,0:40:6.01:85,6,0	1/1:26,0:26:55.54:508,56,0	1/1:25,0:24:9.03:190,9,0	0/0:28,0:27:77.55:0,78,787	0/0:10,0:9:17.77:0,18,150	1/1:14,0:13:31.94:320,32,0	1/1:11,0:10:23.63:303,24,0	0/0:26,0:26:32.31:0,32,482	0/0:24,0:24:9:0,9,149	1/1:16,0:16:12.01:268,12,0	0/0:30,0:28:69.12:0,69,1267	0/0:19,0:18:48.74:0,49,711	1/1:11,0:9:16:164,16,0	1/1:10,0:10:10.67:120,11,0	0/1:17,0:16:5.38:215,0,5	1/1:12,0:11:23.95:238,24,0	0/1:1,11:11:0:0,0,0	1/1:33,1:32:54.68:708,55,0	0/0:14,0:13:38.14:0,38,433	0/0:26,0:24:62.72:0,63,667	1/1:17,0:17:34.88:275,35,0	0/1:12,0:10:1.89:2,0,175
chr10	50762128	.	AGAGC	A	4205.18	PASS	AB=1.000;AC=33;AF=0.589;AN=56;BaseQRankSum=-0.547;DP=557;FS=13.936;HRun=0;HaplotypeScore=86.3517;InbreedingCoeff=0.8951;MQ=70.79;MQ0=18;MQRankSum=-0.257;QD=12.86;ReadPosRankSum=2.559;VQSLOD=1.6412;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:28:52.01:530,52,0	1/1:11,0:11:26.23:221,26,0	0/0:24,0:15:35.87:0,36,283	0/0:30,0:20:34.79:0,35,337	0/0:18,0:17:41.77:0,42,318	1/1:12,0:12:29.44:248,29,0	1/1:41,0:40:5.97:46,6,0	1/1:29,0:29:67.31:597,67,0	1/1:25,0:24:9.01:98,9,0	0/0:26,0:25:6.78:0,7,406	0/0:11,0:10:17.41:0,17,120	1/1:15,0:14:35.89:309,36,0	1/1:11,0:11:26.95:244,27,0	0/0:24,0:24:27.24:0,27,234	1/1:3,21:24:2.88:57,3,0	1/1:16,0:16:12.01:143,12,0	0/0:24,0:23:20.45:0,20,413	0/0:20,0:19:47.39:0,47,376	1/1:14,0:12:26.29:249,26,0	1/1:11,0:11:13.99:145,14,0	1/1:18,0:17:32.82:273,33,0	1/1:12,0:12:26.94:221,27,0	0/1:12,0:11:0.13:0,0,0	1/1:29,0:28:48.52:518,49,0	0/0:16,0:15:41.12:0,41,314	0/0:24,0:22:58.90:0,59,419	1/1:18,0:18:40.21:304,40,0	0/0:13,0:11:8.56:0,9,130
chr10	50765053	.	TCAGA	T	9651.90	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=15.923;DP=706;FS=9.193;HRun=0;HaplotypeScore=117.2970;InbreedingCoeff=0.9993;MQ=83.81;MQ0=0;MQRankSum=-6.661;QD=48.50;ReadPosRankSum=-0.013;VQSLOD=5.2815;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,108,3019	1/1:0,8:8:21.07:419,21,0	0/0:28,0:28:81.28:0,81,2087	0/0:16,0:16:45.15:0,45,1169	0/0:27,0:27:81.28:0,81,2180	0/0:19,0:19:57.20:0,57,1580	0/0:28,0:28:81.28:0,81,2197	1/1:3,24:27:69.22:1326,69,0	0/0:25,0:25:75.26:0,75,2080	0/0:22,0:22:63.22:0,63,1674	0/0:19,0:19:54.19:0,54,1511	0/0:33,0:33:96.33:0,96,2660	0/0:29,0:29:87.30:0,87,2384	0/0:41,0:41:99:0,123,3292	1/1:0,37:37:93.32:1847,93,0	1/1:1,22:23:56.99:1133,57,0	0/0:28,0:28:84.26:0,84,2289	0/0:16,0:16:40.02:0,40,1092	1/1:0,20:20:60.21:1183,60,0	1/1:1,21:22:57.20:1132,57,0	1/1:1,30:31:66.23:1294,66,0	0/0:27,0:27:81.28:0,81,2266	0/0:23,0:23:69.24:0,69,1893	0/0:28,0:28:84.29:0,84,2314	0/0:22,0:22:66.23:0,66,1836	0/0:28,0:28:84.27:0,84,2254	1/1:2,29:31:66.23:1317,66,0	0/0:12,0:12:36.12:0,36,1007
chr10	50765750	.	T	TC	13895.73	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-11.064;DP=553;FS=3.746;HRun=0;HaplotypeScore=54.3164;InbreedingCoeff=0.9993;MQ=82.99;MQ0=0;MQRankSum=-2.788;QD=42.89;ReadPosRankSum=-0.479;VQSLOD=5.0786;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,32:33:87.30:1390,87,0	1/1:0,8:8:24.08:383,24,0	0/0:16,0:16:42.94:0,43,540	0/0:22,0:22:53.70:0,54,662	0/0:26,0:26:78.26:0,78,1082	1/1:0,26:26:75.26:1197,75,0	1/1:0,15:14:39.13:622,39,0	1/1:0,30:31:93.28:1400,93,0	1/1:0,16:16:39.13:623,39,0	0/0:30,0:30:87.29:0,87,1215	0/0:26,0:26:78.26:0,78,1080	1/1:0,19:19:48.16:766,48,0	1/1:0,15:16:45.15:705,45,0	0/0:11,0:11:33.11:0,33,461	1/1:2,19:21:48.16:754,48,0	1/1:0,12:12:33.11:527,33,0	0/0:30,0:30:90.30:0,90,1255	0/0:17,0:17:51.15:0,51,694	1/1:0,22:22:63.17:977,63,0	1/1:0,8:8:24.08:384,24,0	1/1:0,25:25:72.25:1149,72,0	1/1:0,14:14:39.13:623,39,0	1/1:0,17:17:45.15:718,45,0	1/1:0,21:21:57.19:911,57,0	0/0:17,0:17:48.16:0,48,671	0/0:23,0:23:69.22:0,69,945	1/1:0,20:20:48.16:765,48,0	0/0:11,0:11:33.11:0,33,461
chr10	50765972	.	TGA	T	426.70	PASS	AB=0.694;AC=8;AF=0.143;AN=56;BaseQRankSum=5.765;DP=386;FS=24.167;HRun=0;HaplotypeScore=50.5505;InbreedingCoeff=0.0327;MQ=65.62;MQ0=3;MQRankSum=-3.053;QD=8.37;ReadPosRankSum=-2.279;VQSLOD=1.2747;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:87.30:0,87,1666	1/1:0,1:1:3.01:46,3,0	0/0:18,0:14:39.12:0,39,600	0/0:15,0:11:30.05:0,30,402	0/0:11,0:11:30.09:0,30,546	0/0:15,0:15:45.15:0,45,866	0/0:25,0:25:72.23:0,72,1340	0/0:2,0:2:6.02:0,6,116	0/0:19,0:19:54.19:0,54,1034	0/0:10,0:10:30.10:0,30,547	0/0:13,0:13:39.13:0,39,753	0/0:14,0:14:42.13:0,42,779	0/0:17,0:17:51.17:0,51,983	0/0:18,0:18:54.17:0,54,1001	0/1:4,4:8:73.53:74,0,213	0/1:4,4:8:99:116,0,210	0/0:35,0:35:99:0,105,2006	0/0:13,0:13:36.11:0,36,643	0/1:2,1:2:39.85:40,0,52	0/1:5,7:12:99:138,0,262	0/1:9,5:14:99:112,0,266	0/0:7,0:7:21.07:0,21,405	0/0:7,0:7:21.07:0,21,405	0/0:20,0:20:60.21:0,60,1159	0/0:20,0:20:60.21:0,60,1159	0/0:18,0:18:51.17:0,51,950	0/1:3,2:5:33.81:34,0,161	0/0:8,0:8:24.08:0,24,464
chr10	50766083	.	TA	T	570.97	PASS	AC=16;AF=0.421;AN=38;BaseQRankSum=6.674;DP=213;FS=0.000;HRun=2;HaplotypeScore=37.2886;InbreedingCoeff=0.8490;MQ=77.63;MQ0=2;MQRankSum=-5.111;QD=12.41;ReadPosRankSum=-0.443;VQSLOD=1.8202;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,8:9:11.98:96,12,0	./.	0/0:5,0:4:6.01:0,6,71	0/0:14,0:12:21.54:0,22,301	0/0:15,0:15:42.13:0,42,599	1/1:0,4:4:8.98:71,9,0	1/1:0,3:3:8.97:70,9,0	1/1:12,0:10:29.63:320,30,0	1/1:2,1:3:6:61,6,0	0/0:20,0:20:60.20:0,60,877	0/0:13,0:13:33.10:0,33,477	1/1:0,0:4:2.74:12,3,0	1/1:2,2:7:8.74:65,9,0	0/0:6,0:6:18.05:0,18,250	./.	./.	0/0:21,0:21:60.18:0,60,877	0/0:14,0:14:39.13:0,39,580	./.	./.	./.	./.	1/1:2,1:4:5.73:35,6,0	./.	0/0:20,0:20:60.20:0,60,884	0/0:13,0:13:39.12:0,39,547	./.	0/0:18,0:18:48.11:0,48,647
chr10	50766084	.	A	AT	573.07	PASS	AC=14;AF=0.368;AN=38;BaseQRankSum=5.751;DP=206;FS=1.827;HRun=1;HaplotypeScore=40.9379;InbreedingCoeff=0.8079;MQ=78.25;MQ0=2;MQRankSum=-4.610;QD=14.69;ReadPosRankSum=-0.960;VQSLOD=2.7725;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,0:8:11.11:82,11,0	./.	0/0:5,0:4:6.01:0,6,66	0/0:15,0:12:21.95:0,22,281	0/0:14,0:14:42.13:0,42,563	1/1:6,0:6:8.28:40,8,0	1/1:3,0:3:8.63:75,9,0	1/1:0,12:10:30.10:409,30,0	1/1:2,0:2:5.69:48,6,0	0/0:20,0:20:60.19:0,60,823	0/0:12,0:12:33.10:0,33,446	0/0:4,0:4:0.47:0,0,1	1/1:5,1:6:5.06:58,5,0	0/0:6,0:6:18.05:0,18,235	./.	./.	0/0:20,0:20:60.18:0,60,820	0/0:14,0:14:39.13:0,39,544	./.	./.	./.	./.	1/1:2,0:2:2.04:10,2,0	./.	0/0:20,0:20:60.20:0,60,834	0/0:13,0:13:39.12:0,39,523	./.	0/0:19,0:19:48.11:0,48,614
chr10	50766086	.	TATACATAC	T	986	PASS	AB=1.000;AC=15;AF=0.395;AN=38;BaseQRankSum=6.986;DP=200;FS=1.922;HRun=0;HaplotypeScore=69.3093;InbreedingCoeff=0.7083;MQ=78.69;MQ0=2;MQRankSum=-4.814;QD=24.05;ReadPosRankSum=-0.538;VQSLOD=2.7257;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:4,4:8:11.63:218,12,0	./.	0/0:5,0:4:3.01:0,3,44	0/0:15,0:12:19.75:0,20,411	0/0:15,0:15:39.13:0,39,1601	1/1:2,4:6:11.78:220,12,0	1/1:1,2:3:9.03:173,9,0	0/1:11,0:9:33.01:116,0,33	1/1:0,1:1:3.01:69,3,0	0/0:20,0:20:60.19:0,60,2243	0/0:11,0:11:30.06:0,30,981	1/1:4,0:4:3.01:59,3,0	1/1:4,2:6:9.02:155,9,0	0/0:5,0:5:15.05:0,15,552	./.	./.	0/0:19,0:19:57.17:0,57,2244	0/0:14,0:14:39.13:0,39,1521	./.	./.	./.	./.	1/1:1,1:2:6.02:127,6,0	./.	0/0:20,0:20:60.18:0,60,2350	0/0:11,0:11:33.11:0,33,1367	./.	0/0:19,0:19:57.20:0,57,2236
chr10	50767512	.	T	TG	10927.45	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-3.123;DP=470;FS=5.035;HRun=1;HaplotypeScore=54.9141;InbreedingCoeff=0.9955;MQ=73.58;MQ0=0;MQRankSum=-5.544;QD=41.87;ReadPosRankSum=3.684;VQSLOD=5.2671;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,28:28:81.27:1213,81,0	1/1:0,7:7:21.07:315,21,0	0/0:24,0:24:60.14:0,60,732	0/0:14,0:14:36.10:0,36,440	0/0:27,0:27:81.21:0,81,1032	1/1:0,12:12:36.12:540,36,0	1/1:1,25:26:62.72:983,63,0	1/1:2,14:16:45.15:664,45,0	1/1:1,14:15:39.13:584,39,0	0/0:22,0:22:63.15:0,63,787	0/0:19,0:19:51.12:0,51,631	1/1:0,26:26:72.24:1079,72,0	1/1:0,14:14:39.13:584,39,0	0/0:20,0:20:54.17:0,54,697	1/1:0,23:23:66.18:964,66,0	1/1:0,6:6:18.06:270,18,0	0/0:19,0:19:51.17:0,51,662	0/0:17,0:17:42.14:0,42,545	1/1:0,6:5:18.06:269,18,0	1/1:0,8:8:24.08:360,24,0	1/1:2,15:17:45.15:675,45,0	1/1:1,11:12:33.11:495,33,0	1/1:0,12:12:36.12:539,36,0	1/1:1,26:27:75.25:1124,75,0	0/0:14,0:14:42.13:0,42,531	0/0:21,0:21:63.20:0,63,818	1/1:0,6:6:18.06:270,18,0	0/0:12,0:12:36.12:0,36,463
chr10	50767581	.	AGT	A	133.47	PASS	AB=0.979;AC=26;AF=0.500;AN=52;BaseQRankSum=5.471;DP=284;FS=0.000;HRun=0;HaplotypeScore=56.3453;InbreedingCoeff=0.5564;MQ=60.81;MQ0=5;MQRankSum=-2.161;QD=1.00;ReadPosRankSum=-3.379;VQSLOD=0.4173;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,1:20:2.83:27,3,0	1/1:6,0:6:3.47:27,3,0	0/0:21,0:14:31.13:0,31,355	0/0:30,0:10:23.51:0,24,207	0/0:8,0:8:24.05:0,24,321	1/1:3,0:3:2.70:7,3,0	0/1:22,1:23:21.08:54,0,21	1/1:6,0:6:1.72:4,2,0	0/1:10,0:10:1.36:1,0,3	0/0:14,0:14:38.99:0,39,585	0/0:8,0:8:21.05:0,21,301	1/1:17,1:17:2.97:26,3,0	0/0:10,0:10:6.50:0,7,21	0/0:11,0:11:30.09:0,30,467	1/1:11,0:11:3.63:15,4,0	1/1:5,0:5:2.68:11,3,0	0/0:14,0:14:36.53:0,37,484	0/0:8,0:7:17.29:0,17,220	./.	1/1:1,0:1:0.89:2,1,0	1/1:5,2:7:5.99:50,6,0	1/1:7,0:7:1.33:17,1,0	./.	1/1:12,0:11:5.05:25,5,0	0/0:6,0:6:18.06:0,18,292	0/0:12,0:12:32.91:0,33,445	1/1:3,1:4:3:25,3,0	0/0:7,0:7:9.03:0,9,145
chr10	50768583	.	TTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	T	8914.73	PASS	AB=0.961;AC=20;AF=0.357;AN=56;BaseQRankSum=1.282;DP=578;FS=11.170;HRun=0;HaplotypeScore=483.1247;InbreedingCoeff=-0.1475;MQ=59.79;MQ0=27;MQRankSum=-6.848;QD=28.12;ReadPosRankSum=8.005;VQSLOD=1.0124;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:17,0:17:99:364,0,600	0/1:7,0:7:59.75:60,0,832	0/0:28,0:14:14.92:0,15,344	0/0:28,0:14:9.68:0,10,437	0/0:26,0:25:44.99:0,45,2598	0/1:25,0:24:99:359,0,1258	1/1:13,0:11:0.06:442,0,0	1/1:18,0:18:35.01:526,35,0	0/1:14,0:14:99:117,0,385	0/0:18,0:18:51.17:0,51,3917	0/0:22,0:21:45.15:0,45,2415	0/1:21,0:20:99:1132,0,827	0/1:20,0:20:99:1160,0,854	0/0:18,0:16:39.09:0,39,1644	0/1:16,0:16:99:755,0,973	0/1:24,0:22:99:738,0,1732	0/0:20,0:20:42.10:0,42,2378	0/0:25,0:24:63.20:0,63,4936	0/1:18,0:18:99:539,0,625	0/1:30,0:30:99:695,0,2292	1/1:11,0:11:12.40:197,12,0	0/1:11,0:14:8.94:9,0,902	0/1:16,13:28:99:337,0,1029	0/1:14,0:14:99:556,0,466	0/0:22,0:21:54.37:0,54,3270	0/0:33,0:32:78.26:0,78,5397	0/1:24,0:24:99:929,0,926	0/0:14,0:11:21.07:0,21,1395
chr10	50768595	.	C	CTT	2432.89	PASS	AB=0.939;AC=19;AF=0.339;AN=56;BaseQRankSum=6.825;DP=565;FS=0.412;HRun=1;HaplotypeScore=196.4482;InbreedingCoeff=0.6493;MQ=49.49;MQ0=50;MQRankSum=-8.328;QD=10.81;ReadPosRankSum=3.881;VQSLOD=0.5612;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:9,7:16:7.77:148,0,8	0/0:7,0:6:13.90:0,14,83	0/0:22,0:8:14.90:0,15,116	0/0:24,0:10:3.05:0,3,120	0/0:25,0:22:39.42:0,39,350	1/1:11,16:26:42.11:494,42,0	0/1:10,0:7:0.08:97,0,0	0/0:15,0:14:29.29:0,29,124	1/1:9,7:14:21.03:211,21,0	0/0:22,0:19:54.08:0,54,514	0/0:22,0:20:47.85:0,48,425	1/1:22,0:21:41.21:413,41,0	1/1:26,0:23:26:471,26,0	0/0:18,0:14:22.02:0,22,270	0/0:16,0:17:13.09:0,13,198	0/0:20,0:18:46.04:0,46,249	0/0:22,0:18:41.82:0,42,406	0/0:24,0:23:60.76:0,61,499	0/1:16,0:16:2.52:3,0,135	0/1:27,0:26:0.85:1,0,217	0/1:7,0:7:10.66:11,0,19	1/1:15,0:13:0.96:107,1,0	1/1:27,0:26:33.03:338,33,0	1/1:16,0:14:30.60:328,31,0	0/0:27,0:24:61.34:0,61,558	0/0:34,0:31:88.54:0,89,805	0/0:23,0:22:30.62:0,31,232	0/0:18,0:11:28.71:0,29,233
chr10	50768604	.	TCTC	T	1104.40	PASS	AB=0.892;AC=16;AF=0.286;AN=56;BaseQRankSum=11.246;DP=537;FS=7.924;HRun=0;HaplotypeScore=211.3396;InbreedingCoeff=-0.2364;MQ=42.84;MQ0=52;MQRankSum=-8.950;QD=3.92;ReadPosRankSum=12.906;VQSLOD=-0.6829;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:16,0:16:55.16:64,0,55	0/1:5,3:7:32.55:33,0,37	0/0:14,0:4:6.02:0,6,76	0/0:16,0:5:9.50:0,9,108	0/0:25,0:22:47.99:0,48,734	0/1:25,0:24:39.39:170,0,39	0/0:10,0:7:14.44:0,14,102	0/0:8,0:7:2.64:0,3,13	0/1:17,0:15:29.19:95,0,29	0/0:20,0:17:51.17:0,51,864	0/0:24,0:22:54.16:0,54,747	0/1:22,0:21:94.16:128,0,94	0/1:27,0:24:99:100,0,170	0/0:15,0:11:30.09:0,30,407	0/1:11,8:19:84.20:84,0,109	0/1:14,7:19:68.86:69,0,173	0/0:20,0:16:27.78:0,28,540	0/0:24,0:23:69.23:0,69,1145	0/1:8,6:14:92.45:92,0,100	0/1:17,5:21:31.17:31,0,299	0/1:8,0:7:5.24:28,0,5	0/1:14,0:12:27.97:32,0,28	0/1:29,0:26:20.30:135,0,20	1/1:14,0:12:8.33:104,8,0	0/0:29,0:26:64.25:0,64,920	0/0:32,0:29:87.25:0,87,1297	0/1:19,7:25:99:100,0,119	0/0:17,0:10:27.07:0,27,422
chr10	50769340	.	A	ACCGGAGAGGGAAC	12360.72	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=11.443;DP=525;FS=14.956;HRun=0;HaplotypeScore=200.8081;InbreedingCoeff=0.9981;MQ=76.09;MQ0=0;MQRankSum=-14.644;QD=107.48;ReadPosRankSum=-3.931;VQSLOD=2.5656;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,108,3839	1/1:5,2:7:18.06:992,18,0	0/0:12,0:12:29.29:0,29,803	0/0:12,0:12:33.11:0,33,917	0/0:21,0:21:57.20:0,57,2259	0/0:19,0:19:54.19:0,54,1977	0/0:28,0:28:72.23:0,72,2602	1/1:21,0:21:54.13:1893,54,0	0/0:11,0:11:30.10:0,30,1115	0/0:17,0:17:45.15:0,45,1652	0/0:12,0:12:36.12:0,36,1375	0/0:20,0:20:60.20:0,60,2286	0/0:18,0:18:51.14:0,51,1828	0/0:18,0:18:54.19:0,54,2121	1/1:8,6:14:42.14:2207,42,0	1/1:11,3:14:36.12:1562,36,0	0/0:42,0:42:99:0,117,4276	0/0:26,0:26:69.22:0,69,2638	1/1:11,2:13:39.13:1582,39,0	1/1:12,4:16:42.06:1550,42,0	1/1:17,1:18:30.54:966,31,0	0/0:19,0:19:57.20:0,57,2115	0/0:19,0:19:54.19:0,54,2045	0/0:19,0:19:54.19:0,54,2140	0/0:11,0:11:30.10:0,30,1093	0/0:29,0:29:78.27:0,78,2952	1/1:10,2:12:33.11:1608,33,0	0/0:18,0:18:54.19:0,54,2059
chr10	50769344	.	G	GAGA	4495.35	PASS	AB=0.706;AC=12;AF=0.214;AN=56;BaseQRankSum=12.660;DP=497;FS=2.764;HRun=0;HaplotypeScore=111.0847;InbreedingCoeff=0.5627;MQ=76.77;MQ0=0;MQRankSum=-13.241;QD=45.87;ReadPosRankSum=1.166;VQSLOD=6.9223;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,120,2142	1/1:6,0:6:10.71:200,11,0	0/0:11,0:11:30.08:0,30,514	0/0:12,0:12:33.11:0,33,596	0/0:19,0:19:57.20:0,57,1061	0/0:18,0:18:54.19:0,54,1007	0/0:27,0:27:78.25:0,78,1421	0/1:8,10:18:99:850,0,102	0/0:10,0:10:30.10:0,30,559	0/0:15,0:15:45.15:0,45,837	0/0:12,0:12:36.12:0,36,671	0/0:22,0:22:63.19:0,63,1114	0/0:17,0:17:51.16:0,51,919	0/0:19,0:19:57.18:0,57,1031	1/1:8,4:12:36.12:760,36,0	1/1:7,5:12:10.27:617,10,0	0/0:40,0:40:99:0,120,2161	0/0:25,0:25:72.19:0,72,1274	0/1:7,3:10:15.52:423,0,16	0/1:6,7:13:13.27:703,0,13	0/1:13,6:19:93.13:454,0,93	0/0:20,0:20:60.19:0,60,1078	0/0:18,0:18:54.19:0,54,1002	0/0:19,0:19:57.18:0,57,1032	0/0:11,0:11:33.10:0,33,586	0/0:26,0:26:78.27:0,78,1434	1/1:4,4:8:24.08:488,24,0	0/0:18,0:18:54.19:0,54,1006
chr10	50769346	.	T	TG	2503.68	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=13.784;DP=492;FS=2.591;HRun=3;HaplotypeScore=85.7244;InbreedingCoeff=0.9960;MQ=76.98;MQ0=0;MQRankSum=-12.882;QD=25.55;ReadPosRankSum=-1.605;VQSLOD=2.5499;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,108,1401	1/1:0,6:6:15.05:205,15,0	0/0:11,0:11:24.08:0,24,311	0/0:12,0:12:30.02:0,30,339	0/0:20,0:20:60.18:0,60,764	0/0:18,0:18:54.18:0,54,701	0/0:27,0:27:81.25:0,81,1034	1/1:12,7:19:56.72:529,57,0	0/0:10,0:10:30.10:0,30,389	0/0:16,0:16:45.14:0,45,571	0/0:12,0:12:36.12:0,36,467	0/0:21,0:21:63.20:0,63,817	0/0:16,0:16:48.16:0,48,623	0/0:20,0:20:60.18:0,60,764	1/1:4,8:12:33:381,33,0	1/1:5,7:12:36:404,36,0	0/0:38,0:38:99:0,111,1410	0/0:23,0:23:69.22:0,69,895	1/1:5,4:9:26.97:296,27,0	1/1:7,6:13:35.93:353,36,0	1/1:9,8:17:28.24:282,28,0	0/0:21,0:21:57.19:0,57,740	0/0:18,0:18:54.15:0,54,672	0/0:19,0:19:57.19:0,57,740	0/0:11,0:11:33.11:0,33,428	0/0:25,0:25:75.24:0,75,974	1/1:5,5:10:23.98:260,24,0	0/0:18,0:18:51.17:0,51,662
chr10	50769349	.	AT	A	932.94	PASS	AB=0.731;AC=7;AF=0.125;AN=56;BaseQRankSum=9.545;DP=498;FS=1.284;HRun=2;HaplotypeScore=91.9767;InbreedingCoeff=-0.1437;MQ=76.95;MQ0=0;MQRankSum=-9.709;QD=9.15;ReadPosRankSum=-1.619;VQSLOD=0.7430;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,111,1643	0/0:6,0:6:14.81:0,15,102	0/0:11,0:11:26.76:0,27,349	0/0:13,0:13:32.44:0,32,391	0/0:20,0:20:60.20:0,60,894	0/0:18,0:18:51.17:0,51,761	0/0:27,0:27:81.25:0,81,1188	0/1:11,10:21:99:315,0,145	0/0:10,0:10:30.09:0,30,429	0/0:16,0:16:48.15:0,48,683	0/0:12,0:12:36.11:0,36,518	0/0:21,0:21:63.21:0,63,938	0/0:16,0:16:48.15:0,48,694	0/0:20,0:20:57.18:0,57,833	0/1:8,4:12:89.29:89,0,98	0/1:8,5:13:80.99:148,0,81	0/0:36,0:36:99:0,108,1575	0/0:23,0:23:69.23:0,69,1034	0/1:8,3:11:90.34:90,0,92	0/1:6,7:13:44.19:245,0,44	0/1:11,6:17:77.02:77,0,93	0/0:21,0:21:63.21:0,63,943	0/0:17,0:17:48.15:0,48,700	0/0:19,0:19:57.19:0,57,854	0/0:11,0:11:33.11:0,33,493	0/0:25,0:25:72.24:0,72,1069	0/1:11,4:15:99:100,0,191	0/0:17,0:17:51.16:0,51,743
chr10	50771346	.	T	TA	4879.65	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-13.260;DP=571;FS=12.351;HRun=8;HaplotypeScore=52.1113;InbreedingCoeff=0.9965;MQ=77.75;MQ0=0;MQRankSum=-1.417;QD=28.04;ReadPosRankSum=-0.252;VQSLOD=4.3830;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:48.01:0,48,439	1/1:1,15:16:39.12:450,39,0	0/0:16,0:16:35.83:0,36,324	0/0:9,0:9:14.25:0,14,150	0/0:34,0:34:86.98:0,87,788	0/0:24,0:24:60.01:0,60,545	0/0:16,0:16:39:0,39,352	1/1:5,17:22:29.70:595,30,0	0/0:17,0:17:48:0,48,430	0/0:19,0:19:51.02:0,51,467	0/0:19,0:19:57.01:0,57,514	0/0:24,0:24:63.03:0,63,577	0/0:14,0:14:36.01:0,36,325	0/0:21,0:21:51.01:0,51,467	1/1:3,27:30:69.21:796,69,0	1/1:3,23:27:59.24:721,59,0	0/0:16,0:16:42.01:0,42,380	0/0:18,0:18:36.01:0,36,330	1/1:7,17:24:60.15:670,60,0	1/1:2,15:17:45.09:505,45,0	1/1:1,13:14:39.12:450,39,0	0/0:24,0:24:60.01:0,60,549	0/0:22,0:22:63.03:0,63,576	0/0:24,0:24:66.03:0,66,604	0/0:24,0:25:65.02:0,65,573	0/0:23,0:23:54.01:0,54,494	1/1:1,23:24:60.04:692,60,0	0/0:9,0:9:27.02:0,27,247
chr10	50771913	.	TA	T	4830.01	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=13.541;DP=447;FS=4.565;HRun=1;HaplotypeScore=47.3943;InbreedingCoeff=0.9768;MQ=76.39;MQ0=0;MQRankSum=-1.356;QD=38.64;ReadPosRankSum=-1.694;VQSLOD=4.5338;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:66.22:0,66,1020	1/1:0,6:6:15.05:210,15,0	0/0:12,0:12:36.06:0,36,483	0/0:10,0:10:17.58:0,18,222	0/0:28,0:28:84.29:0,84,1328	0/0:20,0:20:60.20:0,60,949	0/0:12,0:12:33.10:0,33,497	1/1:0,33:32:93.31:1299,93,0	0/0:7,0:7:21.07:0,21,328	0/0:15,0:15:45.15:0,45,719	0/0:13,0:13:39.13:0,39,624	0/0:18,0:18:54.17:0,54,824	0/0:18,0:18:54.18:0,54,855	0/0:13,0:13:39.13:0,39,610	1/1:0,11:11:30.10:420,30,0	1/1:0,12:12:33.11:462,33,0	0/0:25,0:25:66.23:0,66,1055	0/0:16,0:16:48.16:0,48,767	1/1:0,19:19:57.18:778,57,0	1/1:0,15:15:42.14:585,42,0	1/1:1,9:10:24.08:325,24,0	0/0:10,0:10:30.07:0,30,405	0/0:8,0:8:24.08:0,24,384	0/0:2,0:2:6.02:0,6,96	0/0:33,0:33:99:0,99,1583	0/0:18,0:18:54.17:0,54,842	1/1:0,19:19:54.10:752,54,0	0/0:21,0:21:63.21:0,63,986
chr10	50772607	.	T	TG	5442.24	PASS	AB=0.550;AC=15;AF=0.268;AN=56;BaseQRankSum=-0.812;DP=509;FS=5.431;HRun=2;HaplotypeScore=51.9806;InbreedingCoeff=0.8848;MQ=67.71;MQ0=0;MQRankSum=-6.386;QD=44.61;ReadPosRankSum=-0.341;VQSLOD=3.9114;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:96.32:0,96,1340	1/1:0,12:12:36.12:571,36,0	0/0:13,0:12:33.07:0,33,427	0/0:5,0:5:15.04:0,15,197	0/0:30,0:30:84.28:0,84,1175	0/0:23,0:23:66.22:0,66,917	0/0:11,0:11:33.11:0,33,460	1/1:6,27:33:96.30:1487,96,0	0/0:13,0:13:33.11:0,33,462	0/0:21,0:21:63.20:0,63,863	0/0:27,0:27:81.27:0,81,1131	0/0:17,0:17:45.15:0,45,629	0/0:15,0:15:36.12:0,36,502	0/0:16,0:16:45.15:0,45,629	1/1:0,15:15:45.15:718,45,0	0/1:2,9:11:8.87:421,0,9	0/0:28,0:28:81.27:0,81,1130	0/0:23,0:23:66.22:0,66,922	1/1:2,14:16:48.16:763,48,0	1/1:0,21:21:60.20:957,60,0	1/1:0,4:4:3.01:48,3,0	0/0:17,0:17:45.15:0,45,629	0/0:15,0:15:39.04:0,39,501	0/0:9,0:9:27.09:0,27,378	0/0:31,0:30:93.31:0,93,1296	0/0:28,0:28:84.28:0,84,1174	1/1:0,10:10:30.10:477,30,0	0/0:10,0:10:30.10:0,30,420
chr10	50772661	.	T	TA	4685.77	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=-4.921;DP=567;FS=1.714;HRun=7;HaplotypeScore=87.2431;InbreedingCoeff=0.9003;MQ=66.54;MQ0=0;MQRankSum=-8.121;QD=26.62;ReadPosRankSum=-3.084;VQSLOD=3.9899;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:78.10:0,78,752	1/1:1,6:7:18.02:199,18,0	0/0:16,0:15:16.29:0,16,194	0/1:14,0:11:17.18:17,0,78	0/0:30,0:30:81.13:0,81,782	0/0:20,0:20:57.07:0,57,543	0/0:11,0:11:21.02:0,21,203	1/1:7,43:51:99:1486,133,0	0/0:15,0:15:30.03:0,30,283	0/0:24,0:24:66.09:0,66,631	0/0:20,0:20:57.08:0,57,547	0/0:15,0:15:24.03:0,24,232	0/0:20,0:20:42.06:0,42,401	0/0:14,0:14:39.04:0,39,369	1/1:3,5:8:15.05:181,15,0	1/1:1,12:13:36.08:416,36,0	0/0:30,0:30:78.10:0,78,745	0/0:24,0:24:57.08:0,57,550	1/1:3,17:19:51.08:584,51,0	1/1:9,20:29:63.09:740,63,0	1/1:1,4:5:9.03:109,9,0	0/0:15,0:15:42.05:0,42,396	0/0:13,0:13:36.05:0,36,342	0/0:16,0:16:45.02:0,45,420	0/0:27,0:26:72.12:0,72,695	0/0:31,0:31:84.13:0,84,810	1/1:3,25:29:81.20:953,81,0	0/0:16,0:16:48.08:0,48,463
chr10	50772696	.	GTC	G	5196.65	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=4.048;DP=721;FS=1.298;HRun=0;HaplotypeScore=126.9913;InbreedingCoeff=0.9569;MQ=57.94;MQ0=5;MQRankSum=4.450;QD=30.93;ReadPosRankSum=4.330;VQSLOD=6.4666;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,29:32:72.24:1018,72,0	0/0:11,0:11:20.79:0,21,375	0/0:31,1:17:34.81:0,35,540	0/0:37,0:24:34.09:0,34,624	0/0:30,0:29:81.26:0,81,1446	1/1:3,15:18:42.14:593,42,0	1/1:1,12:13:24.08:343,24,0	0/0:70,0:67:99:0,182,3102	1/1:1,15:16:29.84:429,30,0	0/0:23,0:23:69.23:0,69,1220	0/0:22,0:22:66.21:0,66,1166	1/1:0,13:13:21.05:300,21,0	1/1:3,19:21:45.13:625,45,0	0/0:18,0:18:51.17:0,51,911	0/0:19,0:17:24.08:0,24,437	0/0:19,1:20:1:0,1,650	0/0:34,0:32:84.22:0,84,1484	0/0:22,0:22:60.04:0,60,1051	0/0:35,0:33:86.14:0,86,1311	0/0:39,0:39:90.28:0,90,1607	0/0:26,0:22:15.05:0,15,259	1/1:1,20:20:51.17:731,51,0	1/1:0,13:13:36.12:515,36,0	1/1:4,14:18:45.15:642,45,0	0/0:22,1:22:14.39:0,14,928	0/0:34,0:34:96.31:0,96,1720	0/0:38,0:38:90.31:0,90,1630	0/0:20,0:20:60.21:0,60,1085
chr10	50772764	.	CTGTCTCTGCCTTTCTG	C	3058.86	PASS	AB=0.924;AC=8;AF=0.143;AN=56;BaseQRankSum=8.634;DP=777;FS=0.000;HRun=0;HaplotypeScore=340.3140;InbreedingCoeff=0.0718;MQ=55.15;MQ0=8;MQRankSum=-8.686;QD=10.85;ReadPosRankSum=-3.288;VQSLOD=1.1883;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:43:99:0,110,3983	0/1:17,0:18:40.65:234,0,41	0/0:36,0:13:20.61:0,21,474	0/1:60,0:26:28.37:28,0,631	0/0:18,0:18:51.17:0,51,2299	0/0:27,0:27:48.07:0,48,1773	0/0:20,0:19:36.09:0,36,1062	1/1:15,31:48:9.35:1925,9,0	0/0:15,0:15:36.11:0,36,1232	0/0:30,0:30:90.28:0,90,4501	0/0:21,0:20:60.19:0,60,3195	0/0:21,0:21:51.54:0,52,2464	0/0:16,0:16:42.14:0,42,1704	0/0:24,0:24:69.24:0,69,4095	0/0:24,0:25:0.64:0,1,9	0/1:23,0:26:64.36:153,0,64	0/0:26,0:25:75.22:0,75,3750	0/0:28,0:28:84.18:0,84,4636	0/1:30,0:28:99:225,0,214	0/1:45,0:51:32.63:311,0,33	0/0:21,0:16:1.85:0,2,20	0/0:13,0:13:34.62:0,35,1039	0/0:19,0:18:48.15:0,48,1598	0/0:22,0:21:45.14:0,45,1503	0/0:20,0:20:60.02:0,60,2561	0/0:27,0:26:78.26:0,78,4201	0/1:40,0:42:71.26:319,0,71	0/0:16,0:15:45.08:0,45,1994
chr10	50772766	.	G	GTC	2548.01	PASS	AB=0.789;AC=10;AF=0.179;AN=56;BaseQRankSum=10.832;DP=766;FS=12.273;HRun=0;HaplotypeScore=194.4374;InbreedingCoeff=0.2913;MQ=55.31;MQ0=9;MQRankSum=-9.883;QD=8.44;ReadPosRankSum=-0.072;VQSLOD=2.2674;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:41:99:0,99,1320	0/1:4,14:18:9.67:395,0,10	0/0:39,0:13:21.44:0,21,259	0/1:60,0:25:28.33:28,0,238	0/0:19,0:19:42.13:0,42,561	0/0:26,0:26:39.13:0,39,536	0/0:19,0:18:33.10:0,33,437	0/1:43,3:46:99:212,0,133	0/0:15,0:15:33.09:0,33,435	0/0:30,0:30:78.24:0,78,1053	0/0:22,0:20:54.18:0,54,742	0/0:20,0:20:48.16:0,48,660	0/0:16,0:16:39.13:0,39,535	0/0:25,0:25:72.21:0,72,955	0/1:17,11:25:12.88:27,0,13	1/1:14,14:25:33.06:585,33,0	0/0:27,0:26:72.16:0,72,945	0/0:29,0:29:84.26:0,84,1135	0/1:24,6:25:17.76:313,0,18	0/1:27,24:51:8.66:340,0,9	0/0:17,5:17:2.63:0,3,25	0/0:13,0:13:24.07:0,24,309	0/0:18,0:17:42.14:0,42,576	0/0:21,0:20:39.11:0,39,517	0/0:19,0:19:48.15:0,48,643	0/0:27,0:26:72.22:0,72,958	1/1:17,24:41:16.54:805,17,0	0/0:14,0:13:39.13:0,39,534
chr10	50772770	.	CTGCCTT	C	2909.89	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=12.189;DP=739;FS=0.857;HRun=0;HaplotypeScore=228.3387;InbreedingCoeff=0.8275;MQ=54.97;MQ0=8;MQRankSum=-10.341;QD=10.25;ReadPosRankSum=-3.066;VQSLOD=2.4020;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:44:99:0,113,3432	1/1:19,1:20:30.15:351,30,0	0/0:37,0:13:9.42:0,9,561	0/1:57,0:24:29.63:30,0,485	0/0:17,0:17:45.15:0,45,1477	0/0:24,0:24:45.06:0,45,1429	0/0:22,0:21:43.66:0,44,1191	1/1:42,2:44:87.22:877,87,0	0/0:14,0:14:36.12:0,36,1114	0/0:27,0:27:78.27:0,78,2711	0/0:23,0:21:63.22:0,63,2115	0/0:20,0:20:54.55:0,55,1736	0/0:15,0:15:39.13:0,39,1372	0/0:26,0:26:75.26:0,75,2595	1/1:27,1:25:7.30:65,7,0	1/1:27,0:24:34.46:451,34,0	0/0:26,0:25:75.26:0,75,2441	0/0:30,0:30:90.31:0,90,2953	1/1:19,1:18:22.24:280,22,0	1/1:43,4:47:38.76:569,39,0	0/0:20,0:15:1.55:0,2,6	0/0:10,0:10:25.64:0,26,813	0/0:17,0:16:42.14:0,42,1375	0/0:23,0:22:45.06:0,45,1347	0/0:18,0:18:51.07:0,51,1709	0/0:27,0:26:75.26:0,75,2546	1/1:40,1:41:3.92:477,4,0	0/0:14,0:13:39.13:0,39,1275
chr10	50772771	.	TGC	T	905.59	PASS	AB=0.986;AC=10;AF=0.179;AN=56;BaseQRankSum=11.276;DP=724;FS=9.448;HRun=0;HaplotypeScore=194.1169;InbreedingCoeff=0.0937;MQ=55.27;MQ0=8;MQRankSum=-7.736;QD=2.89;ReadPosRankSum=-2.459;VQSLOD=1.5913;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:43:99:0,111,2143	0/1:19,0:19:21.72:127,0,22	0/1:38,0:14:0.47:0,0,434	0/1:55,0:24:4.75:5,0,370	0/0:15,0:15:45.15:0,45,882	0/0:24,0:24:44.85:0,45,820	0/0:22,0:21:41.98:0,42,777	0/1:44,0:44:59.44:314,0,59	0/0:14,0:14:39.13:0,39,764	0/0:26,0:26:78.27:0,78,1571	0/0:23,0:21:63.22:0,63,1257	0/0:19,0:19:51.15:0,51,1016	0/0:15,0:15:39.13:0,39,780	0/0:27,0:27:78.27:0,78,1560	0/1:29,0:26:2.07:2,0,13	0/1:26,0:23:8.98:88,0,9	0/0:26,0:25:75.26:0,75,1504	0/0:31,0:31:93.29:0,93,1811	0/1:16,1:15:35.12:104,0,35	1/1:43,1:44:36.65:258,37,0	0/0:17,1:15:2.67:0,3,18	0/0:10,0:10:24.05:0,24,488	0/0:17,0:16:42.14:0,42,832	0/0:23,0:22:41.96:0,42,796	0/0:17,0:17:50.96:0,51,988	0/0:26,0:25:75.26:0,75,1506	0/1:38,1:39:99:144,0,191	0/0:14,0:13:39.13:0,39,790
chr10	50772780	.	G	GTC	9157.19	PASS	AB=0.922;AC=33;AF=0.589;AN=56;BaseQRankSum=-1.976;DP=706;FS=2.687;HRun=0;HaplotypeScore=164.3058;InbreedingCoeff=0.8368;MQ=55.47;MQ0=14;MQRankSum=-0.845;QD=19.28;ReadPosRankSum=-2.246;VQSLOD=4.4873;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,33:41:93.25:1574,93,0	1/1:18,2:20:13.55:145,14,0	0/0:30,0:12:19.21:0,19,182	0/1:48,0:18:2.48:2,0,103	0/0:13,0:13:35.79:0,36,463	1/1:0,23:23:36.12:639,36,0	1/1:5,17:21:24.08:426,24,0	1/1:44,0:43:71.89:1101,72,0	1/1:3,14:17:45.14:760,45,0	0/0:26,0:25:70.11:0,70,934	0/0:23,0:21:57.17:0,57,763	1/1:4,17:21:57.02:1008,57,0	1/1:6,11:18:48.14:811,48,0	0/0:27,0:27:75.22:0,75,993	1/1:21,4:23:8.96:128,9,0	1/1:22,4:23:24:318,24,0	0/0:27,0:26:18.22:0,18,771	0/0:32,0:31:70.67:0,71,1136	1/1:18,1:16:18.39:142,18,0	1/1:40,3:43:14.16:130,14,0	0/1:12,3:12:0:0,0,0	1/1:3,7:10:21.06:344,21,0	1/1:5,10:14:36.12:630,36,0	1/1:4,22:25:39.13:692,39,0	0/0:15,0:15:42.14:0,42,575	0/0:27,0:27:75.20:0,75,993	0/1:38,3:40:49.08:306,0,49	0/0:11,0:10:27.09:0,27,370
chr10	50772782	.	CTCTG	C	419.58	PASS	AB=0.925;AC=10;AF=0.179;AN=56;BaseQRankSum=7.131;DP=706;FS=1.268;HRun=0;HaplotypeScore=210.5662;InbreedingCoeff=0.1048;MQ=55.63;MQ0=15;MQRankSum=-4.085;QD=2.13;ReadPosRankSum=-4.291;VQSLOD=1.4208;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:40:22.21:0,22,1104	0/1:15,5:20:64.57:136,0,65	0/0:29,0:11:2.38:0,2,258	0/0:47,0:18:18.89:0,19,198	0/0:13,0:13:35.79:0,36,867	0/0:23,0:23:24.65:0,25,441	0/0:22,0:21:25.66:0,26,399	0/0:44,0:43:10.08:0,10,579	0/0:18,0:18:34.58:0,35,741	0/0:26,0:25:71.69:0,72,1619	0/0:22,0:20:57.16:0,57,1380	0/0:21,0:21:51.99:0,52,879	0/0:19,0:19:16.59:0,17,575	0/0:27,0:27:78.25:0,78,1964	0/1:23,2:23:17.03:17,0,29	0/1:25,1:23:85.94:129,0,86	0/0:26,0:25:40.18:0,40,1514	0/0:32,0:31:71.28:0,71,2195	0/1:18,1:16:37.88:38,0,270	1/1:35,5:40:3.75:49,4,0	1/1:16,0:13:1.20:3,1,0	0/1:10,0:10:3.89:4,0,285	0/0:17,0:16:15.17:0,15,561	0/0:27,0:26:45.12:0,45,698	0/0:15,0:15:42.02:0,42,907	0/0:29,0:29:81.26:0,81,1974	0/1:37,4:40:99:174,0,455	0/0:11,0:10:27.09:0,27,705
chr10	50772784	.	CTG	C	214.04	PASS	AB=0.981;AC=10;AF=0.179;AN=56;BaseQRankSum=7.449;DP=702;FS=5.363;HRun=0;HaplotypeScore=190.1491;InbreedingCoeff=0.1963;MQ=55.59;MQ0=16;MQRankSum=-5.007;QD=1.09;ReadPosRankSum=-4.856;VQSLOD=0.7115;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,1:41:32.17:0,32,691	0/1:20,0:20:29.71:91,0,30	0/0:27,0:10:20.42:0,20,270	0/0:46,0:18:10.68:0,11,140	0/0:13,0:13:35.77:0,36,613	0/0:23,0:23:35.81:0,36,308	0/0:21,0:20:32.98:0,33,334	0/0:44,0:43:36.71:0,37,621	0/0:18,0:18:34.47:0,34,420	0/0:28,0:27:77.66:0,78,1277	0/0:21,0:19:57.14:0,57,997	0/0:21,0:20:56.91:0,57,512	0/0:18,1:19:21.48:0,21,358	0/0:26,0:26:78.22:0,78,1404	0/1:25,1:23:12.03:12,0,42	0/1:26,0:23:66.84:124,0,67	0/0:25,0:24:44.72:0,45,1125	0/0:32,0:31:71.29:0,71,1614	0/1:17,1:15:1.55:2,0,233	1/1:36,3:39:9.58:58,10,0	1/1:17,0:13:1.21:3,1,0	0/1:10,0:10:3.93:4,0,145	0/0:18,0:17:23.74:0,24,394	0/0:27,0:26:45.03:0,45,428	0/0:15,0:15:42.08:0,42,676	0/0:28,0:28:81.25:0,81,1461	0/1:39,1:39:49.09:49,0,276	0/0:11,0:10:27.09:0,27,519
chr10	50772786	.	GTCTC	G	122.88	PASS	AB=0.942;AC=5;AF=0.089;AN=56;BaseQRankSum=6.335;DP=687;FS=0.000;HRun=0;HaplotypeScore=205.6907;InbreedingCoeff=0.0774;MQ=55.14;MQ0=17;MQRankSum=-5.533;QD=1.19;ReadPosRankSum=-1.113;VQSLOD=1.8193;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:88.69:0,89,1704	0/1:20,0:20:65.42:65,0,108	0/0:24,0:9:21.23:0,21,241	0/0:44,0:18:13.28:0,13,144	0/0:13,0:13:33.09:0,33,786	0/0:23,0:23:36.05:0,36,672	0/0:21,0:20:33.09:0,33,665	0/0:41,0:40:79.28:0,79,994	0/0:19,0:19:49.71:0,50,1086	0/0:28,0:27:71.71:0,72,1550	0/0:20,0:19:51.16:0,51,1257	0/0:21,0:20:57.17:0,57,1225	0/0:18,0:18:48.06:0,48,871	0/0:26,0:26:75.24:0,75,1889	0/0:25,0:22:0.16:0,0,40	0/1:23,2:23:45.45:45,0,162	0/0:25,0:25:43.63:0,44,1472	0/0:31,0:30:84.28:0,84,2081	0/0:18,0:15:2.84:0,3,433	0/0:38,0:38:6.43:0,6,30	1/1:18,0:13:1.08:3,1,0	0/0:9,0:9:21.07:0,21,469	0/0:18,0:17:41.85:0,42,920	0/0:27,0:26:45.15:0,45,970	0/0:15,0:15:30.04:0,30,769	0/0:29,0:28:75.26:0,75,1885	0/1:36,3:38:99:111,0,673	0/0:11,0:10:27.09:0,27,646
chr10	50772788	.	C	CTG	200.87	PASS	AB=0.964;AC=8;AF=0.143;AN=56;BaseQRankSum=6.756;DP=691;FS=4.138;HRun=0;HaplotypeScore=189.2801;InbreedingCoeff=0.2510;MQ=54.72;MQ0=18;MQRankSum=-6.877;QD=1.07;ReadPosRankSum=-3.244;VQSLOD=1.4011;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:40:83.76:0,84,593	0/1:19,1:20:2.28:56,0,2	0/0:24,0:9:22.26:0,22,214	0/0:42,0:17:6.76:0,7,109	0/0:12,0:12:33.09:0,33,483	0/0:21,0:21:35.76:0,36,255	0/0:21,0:20:31.98:0,32,300	0/0:45,0:44:4.14:0,4,578	0/0:18,0:18:48.99:0,49,398	0/0:27,0:26:78.21:0,78,1086	0/0:20,0:18:54.16:0,54,784	0/0:21,0:20:45.95:0,46,383	0/0:18,0:18:45.66:0,46,318	0/0:25,0:25:75.24:0,75,1124	1/1:24,1:22:0.89:13,1,0	0/1:25,2:24:15.67:117,0,16	0/0:26,0:24:42.75:0,43,873	0/0:36,0:35:84.28:0,84,1263	0/1:19,0:15:4.11:4,0,214	0/1:38,0:38:4.56:9,0,5	0/1:18,1:14:0.02:0,0,0	0/0:9,0:9:20.85:0,21,167	0/0:17,0:16:41.72:0,42,366	0/0:27,0:26:43.29:0,43,344	0/0:15,0:15:39.08:0,39,532	0/0:28,0:27:78.25:0,78,1172	0/1:37,2:38:99:118,0,139	0/0:11,0:10:27.09:0,27,413
chr10	50772862	.	G	GCC	147.02	PASS	AB=0.920;AC=6;AF=0.115;AN=52;BaseQRankSum=6.569;DP=623;FS=48.690;HRun=0;HaplotypeScore=148.7962;InbreedingCoeff=0.1403;MQ=42.84;MQ0=54;MQRankSum=-5.479;QD=1.17;ReadPosRankSum=-0.840;VQSLOD=0.7220;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:37:60.91:0,61,793	0/0:9,0:8:6.16:0,6,59	./.	./.	0/0:21,0:16:24:0,24,311	0/0:18,0:16:14.97:0,15,169	0/0:32,0:23:21.19:0,21,300	0/0:22,0:19:28.41:0,28,381	0/0:27,0:25:50.91:0,51,729	0/0:21,0:19:60.16:0,60,868	0/0:13,0:13:18.05:0,18,269	0/0:27,0:22:38.90:0,39,549	0/0:27,0:26:54.18:0,54,824	0/0:25,0:24:57.14:0,57,848	1/1:25,3:22:5.66:72,6,0	0/1:14,3:16:38.89:39,0,171	0/0:32,0:26:63.52:0,64,941	0/0:35,0:32:77.95:0,78,1144	0/1:17,0:13:44.66:45,0,349	0/0:22,0:20:10.83:0,11,151	0/1:33,1:25:34.49:34,0,83	0/0:11,0:10:12.04:0,12,193	0/0:20,0:19:33.03:0,33,506	0/0:33,0:31:38.95:0,39,625	0/0:16,0:13:18.03:0,18,239	0/0:36,0:34:82.95:0,83,1308	0/1:25,5:29:77.46:77,0,426	0/0:9,0:3:5.99:0,6,70
chr10	50772868	.	GTC	G	509.38	PASS	AB=0.937;AC=16;AF=0.320;AN=50;BaseQRankSum=0.538;DP=638;FS=2.484;HRun=0;HaplotypeScore=147.2550;InbreedingCoeff=-0.0049;MQ=43.15;MQ0=54;MQRankSum=3.184;QD=1.56;ReadPosRankSum=-1.505;VQSLOD=2.3894;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:39,4:39:62.12:189,0,62	0/0:8,0:8:0.89:0,1,2	./.	./.	0/0:20,0:15:2.93:0,3,86	0/1:20,1:19:10.01:53,0,10	1/1:32,0:27:13.41:63,13,0	./.	0/1:22,3:25:32.67:74,0,33	0/0:19,0:18:11.62:0,12,127	0/0:10,4:14:6.02:0,6,88	0/1:28,0:23:31.64:32,0,162	0/1:29,2:30:99:100,0,168	0/1:23,0:21:8.67:9,0,269	0/1:22,0:21:0:0,0,1	0/1:18,1:19:27.01:27,0,42	0/0:31,0:25:33.05:0,33,425	0/0:31,4:32:2.98:0,3,370	0/0:17,0:13:9:0,9,85	0/0:22,0:21:1.59:0,2,50	0/0:36,0:27:5.66:0,6,60	1/1:13,1:13:4.87:56,5,0	0/0:22,0:21:9.01:0,9,111	0/0:31,1:30:18.06:0,18,266	0/1:14,3:14:17.93:18,0,102	0/1:35,0:33:1.11:1,0,391	0/0:28,1:28:22.16:0,22,174	1/1:10,0:4:3:29,3,0
chr10	50772872	.	C	CTG	1251.14	PASS	AB=0.945;AC=12;AF=0.231;AN=52;BaseQRankSum=3.477;DP=668;FS=12.297;HRun=0;HaplotypeScore=139.1457;InbreedingCoeff=-0.2848;MQ=43.15;MQ0=57;MQRankSum=3.655;QD=3.97;ReadPosRankSum=-0.571;VQSLOD=2.2098;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:42,0:38:99:180,0,153	0/0:9,0:8:2.96:0,3,19	./.	./.	0/1:20,1:16:20.72:21,0,165	0/1:9,12:20:22.34:152,0,22	0/1:28,5:25:6.31:187,0,6	0/0:26,0:20:37.72:0,38,221	0/1:25,1:25:99:153,0,106	0/0:18,0:17:52.29:0,52,428	0/0:17,0:17:13.03:0,13,201	0/1:26,1:22:99:119,0,207	0/1:33,0:32:99:182,0,173	0/0:23,0:21:47.77:0,48,525	0/0:24,2:21:1.36:0,1,13	0/0:18,0:18:10.35:0,10,68	0/0:33,0:27:61.33:0,61,695	0/0:38,0:34:55.36:0,55,724	0/1:16,0:12:0.76:1,0,138	0/1:21,1:20:34.01:34,0,49	0/0:36,0:27:10.22:0,10,76	0/1:16,0:15:27.42:65,0,27	0/1:23,0:21:58.31:184,0,58	0/1:34,0:32:99:114,0,286	0/0:19,0:16:23.76:0,24,232	0/0:38,0:36:70.36:0,70,942	0/0:31,0:29:35.47:0,35,230	0/0:10,0:4:5.39:0,5,22
chr10	50776028	.	GT	G	4405.98	PASS	AB=0.604;AC=25;AF=0.446;AN=56;BaseQRankSum=4.747;DP=624;FS=4.186;HRun=12;HaplotypeScore=72.3263;InbreedingCoeff=0.6588;MQ=77.81;MQ0=0;MQRankSum=0.026;QD=13.07;ReadPosRankSum=4.809;VQSLOD=5.1982;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:11,33:47:18.06:579,0,18	0/0:4,0:6:14.70:0,15,120	0/0:21,1:21:11.72:0,12,211	0/0:15,0:15:16.17:0,16,106	0/0:29,0:29:57.96:0,58,560	0/1:4,11:15:22.24:176,0,22	1/1:3,27:30:50.25:573,50,0	1/1:13,17:30:43.46:341,43,0	1/1:5,14:21:36.88:267,37,0	0/0:17,0:21:50.75:0,51,473	0/0:14,1:15:13.71:0,14,304	1/1:14,5:19:20.76:161,21,0	1/1:4,21:26:52.77:401,53,0	0/0:28,0:28:61.33:0,61,590	0/0:23,0:23:49.30:0,49,466	1/1:3,12:17:39.91:290,40,0	0/0:30,2:35:39.41:0,39,761	0/0:24,1:28:33.51:0,34,483	0/1:12,12:24:20.86:216,0,21	0/1:7,11:19:1.70:122,0,2	1/1:8,12:21:25.90:192,26,0	1/1:2,9:13:28.92:215,29,0	0/1:4,9:13:12.83:176,0,13	1/1:3,15:18:41.82:325,42,0	0/0:17,0:21:44.72:0,45,407	0/0:21,1:24:21.68:0,22,377	1/1:5,19:24:32.35:373,32,0	0/0:18,1:19:13.26:0,13,291
chr10	50776407	.	T	TGTAGTGTGTGAGTGTA	12458.19	PASS	AB=0.511;AC=15;AF=0.268;AN=56;BaseQRankSum=9.589;DP=717;FS=13.720;HRun=0;HaplotypeScore=320.6845;InbreedingCoeff=0.8755;MQ=88.57;MQ0=0;MQRankSum=-10.037;QD=79.86;ReadPosRankSum=-1.192;VQSLOD=3.1094;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,160,7090	1/1:0,0:9:9.03:450,9,0	0/0:28,0:28:38.68:0,39,2637	0/0:27,0:28:77.55:0,78,2397	0/0:33,0:33:99:0,99,4400	0/0:22,0:22:66.23:0,66,2875	0/0:35,0:35:99:0,102,4414	1/1:1,0:23:64.46:2654,64,0	0/0:25,0:25:72.23:0,72,2900	0/0:28,0:28:78.22:0,78,3035	0/0:8,0:8:24.08:0,24,1065	0/0:25,0:25:75.26:0,75,3406	0/0:31,0:31:90.29:0,90,4099	0/0:24,0:24:69.22:0,69,2785	1/1:1,1:33:29.39:2067,29,0	0/1:1,0:24:99:1828,0,117	0/0:35,0:35:99:0,102,4850	0/0:22,0:22:66.23:0,66,3107	1/1:0,1:18:54.17:2492,54,0	1/1:0,0:8:6.02:414,6,0	1/1:1,0:19:15.05:611,15,0	0/0:26,0:26:78.27:0,78,3377	0/0:23,0:23:66.21:0,66,2521	0/0:42,0:42:99:0,123,4943	0/0:20,0:20:60.18:0,60,2795	0/0:30,0:30:84.29:0,84,3832	1/1:0,0:22:32.78:1943,33,0	0/0:21,0:21:63.19:0,63,2531
chr10	50778667	.	C	CA	5923.74	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-14.202;DP=763;FS=20.892;HRun=8;HaplotypeScore=70.7898;InbreedingCoeff=0.9887;MQ=85.66;MQ0=0;MQRankSum=-1.542;QD=26.93;ReadPosRankSum=-0.639;VQSLOD=3.1953;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,99,898	1/1:2,11:13:8.64:352,9,0	0/0:26,0:27:46.18:0,46,398	0/0:20,0:21:24.38:0,24,335	0/0:39,0:39:99:0,99,906	0/0:36,0:35:96:0,96,864	0/0:26,0:26:69:0,69,626	1/1:6,30:37:90.09:1008,90,0	0/0:25,0:25:62.99:0,63,566	0/0:32,0:32:90.03:0,90,820	0/0:23,0:23:56.99:0,57,513	0/0:15,0:15:26.98:0,27,242	0/0:41,0:41:99:0,123,1125	0/0:21,0:21:63.03:0,63,576	1/1:5,37:42:74.83:1115,75,0	1/1:3,21:24:59.97:692,60,0	0/0:18,0:18:51.01:0,51,461	0/0:14,0:14:38.98:0,39,349	1/1:4,13:18:41.96:464,42,0	1/1:3,24:27:63.13:711,63,0	1/1:7,19:27:57:638,57,0	0/0:24,0:24:60:0,60,541	0/0:40,0:40:99:0,114,1038	0/0:23,0:23:69.02:0,69,626	0/0:32,0:32:83.98:0,84,752	0/0:38,0:38:99:0,105,957	1/1:3,29:32:60.26:943,60,0	0/0:9,0:9:27.01:0,27,247
chr10	50779078	.	TTGTGTG	T	619.89	PASS	AB=0.801;AC=9;AF=0.173;AN=52;BaseQRankSum=1.850;DP=578;FS=2.236;HRun=0;HaplotypeScore=124.0058;InbreedingCoeff=0.4532;MQ=60.27;MQ0=13;MQRankSum=-1.949;QD=4.59;ReadPosRankSum=-0.095;VQSLOD=2.1155;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:18.53:0,19,415	0/0:11,0:14:9.03:0,9,187	./.	./.	0/0:17,0:17:30.03:0,30,633	0/0:8,0:19:9.03:0,9,164	0/0:27,0:27:20.99:0,21,424	0/0:32,0:32:5.97:0,6,61	0/0:18,0:18:21.05:0,21,474	0/0:16,0:16:15.52:0,16,346	0/0:10,0:10:8.20:0,8,168	0/0:26,0:26:18.44:0,18,438	0/0:18,0:18:17.95:0,18,306	0/0:15,0:15:17.74:0,18,443	0/0:22,0:22:36.12:0,36,934	0/1:17,8:25:41.22:214,0,41	0/1:27,0:29:20.80:21,0,617	0/0:15,0:18:19.31:0,19,335	1/1:16,0:14:3:29,3,0	0/1:13,6:18:7.95:118,0,8	1/1:21,0:20:11.42:156,11,0	0/0:11,0:11:9.03:0,9,228	0/0:17,0:17:9.03:0,9,189	0/0:27,0:26:18:0,18,386	0/0:13,0:15:27.09:0,27,660	0/0:17,0:18:26.97:0,27,394	1/1:16,5:22:11.88:223,12,0	0/0:11,0:10:11.30:0,11,237
chr10	50779550	.	T	TC	3417.27	PASS	AB=0.724;AC=8;AF=0.143;AN=56;BaseQRankSum=6.328;DP=710;FS=31.846;HRun=0;HaplotypeScore=78.3694;InbreedingCoeff=-0.1668;MQ=60.39;MQ0=2;MQRankSum=-11.818;QD=15.12;ReadPosRankSum=0.264;VQSLOD=2.3455;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,1:28:52.24:0,52,994	0/1:7,6:13:99:234,0,235	0/0:23,0:20:55.61:0,56,725	0/0:21,0:17:37.51:0,38,554	0/0:32,0:32:90.24:0,90,1158	0/0:30,0:30:90.28:0,90,1239	0/0:22,0:22:60.18:0,60,808	0/1:22,15:35:99:466,0,635	0/0:25,0:25:72.24:0,72,1006	0/0:25,0:25:75.23:0,75,1002	0/0:24,0:24:72.22:0,72,974	0/0:26,0:26:78.24:0,78,1058	0/0:30,0:30:90.24:0,90,1187	0/0:16,0:16:48.16:0,48,671	0/1:23,21:45:99:773,0,805	0/1:18,11:27:99:515,0,372	0/0:24,0:24:63.15:0,63,839	0/0:17,0:17:45.15:0,45,626	0/1:11,21:32:99:772,0,296	0/1:22,7:29:99:258,0,653	0/1:5,2:7:87.77:88,0,142	0/0:25,0:25:75.24:0,75,1031	0/0:26,0:26:66.21:0,66,907	0/0:24,0:24:72.16:0,72,962	0/0:27,0:27:81.26:0,81,1118	0/0:30,0:30:87.27:0,87,1185	0/1:26,8:34:99:311,0,799	0/0:9,0:9:24.08:0,24,335
chr10	50779834	.	GA	G	4525.45	PASS	AB=0.746;AC=34;AF=0.607;AN=56;BaseQRankSum=12.308;DP=705;FS=0.313;HRun=11;HaplotypeScore=96.1342;InbreedingCoeff=0.8363;MQ=75.49;MQ0=4;MQRankSum=0.880;QD=10.19;ReadPosRankSum=2.195;VQSLOD=4.2621;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:7,24:31:7.04:362,0,7	1/1:0,0:6:8.62:24,9,0	0/0:21,0:22:22.78:0,23,264	0/1:12,1:13:60.55:61,0,76	0/0:31,0:35:95.55:0,96,936	1/1:4,12:16:29.96:246,30,0	1/1:1,21:22:53.94:443,54,0	1/1:17,0:39:27.46:104,27,0	1/1:4,15:20:19.79:302,20,0	0/0:27,0:30:83.68:0,84,812	0/0:18,0:21:59.80:0,60,591	1/1:6,17:23:42.24:404,42,0	1/1:4,24:28:34.05:485,34,0	0/0:35,0:36:50.35:0,50,873	1/1:4,0:27:36.66:106,37,0	1/1:2,0:22:36.66:106,37,0	0/0:26,0:27:68.97:0,69,701	0/0:24,1:30:27.27:0,27,591	1/1:1,1:25:46.93:155,47,0	1/1:3,0:19:28.51:82,29,0	1/1:0,1:26:47.81:154,48,0	1/1:4,16:20:32.91:270,33,0	1/1:2,25:27:62.75:517,63,0	1/1:1,23:24:56.69:468,57,0	0/0:33,0:33:68.48:0,68,900	0/0:24,0:24:57.14:0,57,608	1/1:9,0:52:81.46:235,81,0	0/0:2,0:2:6.02:0,6,64
chr10	50780249	.	A	AT	5174.99	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=6.862;DP=589;FS=3.628;HRun=7;HaplotypeScore=68.8596;InbreedingCoeff=0.9868;MQ=81.53;MQ0=0;MQRankSum=-1.555;QD=28.75;ReadPosRankSum=0.874;VQSLOD=5.6147;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,136,1330	1/1:1,14:15:42.13:507,42,0	0/0:20,0:20:45.05:0,45,423	0/0:11,0:11:21.02:0,21,199	0/0:20,0:20:54.08:0,54,521	0/0:24,0:24:72.12:0,72,695	0/0:25,0:25:66.07:0,66,626	1/1:5,26:31:81.24:966,81,0	0/0:21,0:21:60.10:0,60,579	0/0:19,0:19:48.07:0,48,463	0/0:13,0:13:36.06:0,36,348	0/0:16,0:16:39.05:0,39,371	0/0:17,0:17:48.06:0,48,458	0/0:23,0:23:69.11:0,69,666	1/1:4,15:19:45.14:544,45,0	1/1:5,16:21:48.15:580,48,0	0/0:21,0:21:63.10:0,63,607	0/0:15,0:15:45.04:0,45,427	1/1:8,18:26:28.19:623,28,0	1/1:4,19:23:50.28:614,50,0	1/1:1,14:15:42.13:507,42,0	0/0:26,0:26:69.11:0,69,666	0/0:12,0:12:15.02:0,15,145	0/0:18,0:18:51.08:0,51,492	0/0:22,0:22:63.07:0,63,596	0/0:34,0:34:93.14:0,93,898	1/1:4,26:30:69.21:833,69,0	0/0:3,0:3:9.01:0,9,87
chr10	50780436	.	GT	G	2969.89	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-1.090;DP=588;FS=22.361;HRun=10;HaplotypeScore=75.3715;InbreedingCoeff=0.9837;MQ=72.27;MQ0=0;MQRankSum=-0.393;QD=18.45;ReadPosRankSum=1.205;VQSLOD=2.5929;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:59.92:0,60,678	1/1:2,7:9:17.90:141,18,0	0/0:12,0:10:13.38:0,13,98	0/0:14,0:11:14.86:0,15,133	0/0:27,0:27:75.20:0,75,819	0/0:25,0:25:69.50:0,70,701	0/0:19,0:19:51.02:0,51,522	1/1:6,23:28:68.88:576,69,0	0/0:15,0:15:41.43:0,41,416	0/0:22,0:22:30.93:0,31,529	0/0:30,1:31:55.09:0,55,814	0/0:14,0:14:38.97:0,39,388	0/0:18,0:18:48.03:0,48,492	0/0:28,0:28:78.15:0,78,833	1/1:1,22:23:56.99:495,57,0	1/1:2,16:18:35.99:313,36,0	0/0:36,0:36:96.03:0,96,1012	0/0:10,0:10:27.06:0,27,289	1/1:6,14:20:10.87:324,11,0	1/1:1,25:26:71.97:624,72,0	1/1:2,11:13:32.99:286,33,0	0/0:22,0:22:54:0,54,537	0/0:20,0:20:52.13:0,52,538	0/0:30,0:31:82.45:0,82,823	0/0:21,0:21:54.09:0,54,561	0/0:32,0:32:93.18:0,93,977	1/1:1,22:23:47.99:417,48,0	0/0:8,0:8:18.05:0,18,199
chr10	50780883	.	G	GA	3629.83	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=13.316;DP=607;FS=2.253;HRun=6;HaplotypeScore=70.5993;InbreedingCoeff=0.8996;MQ=70.03;MQ0=1;MQRankSum=-1.381;QD=22.41;ReadPosRankSum=-1.466;VQSLOD=2.5284;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:42.09:0,42,427	0/1:7,0:7:6.29:6,0,66	0/0:16,0:16:29.18:0,29,324	0/0:14,0:11:18.02:0,18,183	0/0:27,0:27:72.13:0,72,720	0/0:26,0:26:78.18:0,78,796	0/0:14,0:14:30.04:0,30,298	1/1:20,12:31:50.20:518,50,0	0/0:13,0:13:39.09:0,39,398	0/0:32,0:32:84.17:0,84,852	0/0:30,0:30:73.71:0,74,738	0/0:14,0:14:42.08:0,42,422	0/0:28,0:28:81.18:0,81,826	0/0:28,0:28:81.18:0,81,825	0/0:11,0:11:25.50:0,26,127	1/1:3,22:25:8.55:535,9,0	0/0:16,0:16:39.04:0,39,387	0/0:17,0:17:45.10:0,45,458	1/1:3,16:19:54.14:629,54,0	1/1:8,28:37:66.77:888,67,0	1/1:0,5:6:14.88:159,15,0	0/0:21,0:21:60.13:0,60,612	0/0:35,0:35:90.17:0,90,905	0/0:13,0:13:36.08:0,36,367	0/0:28,0:28:78.16:0,78,789	0/0:27,0:27:78.18:0,78,795	1/1:5,30:35:65.98:893,66,0	0/0:18,0:18:51.12:0,51,520
chr10	50781023	.	CA	C	7735.77	PASS	AB=1.000;AC=31;AF=0.554;AN=56;BaseQRankSum=13.797;DP=564;FS=6.979;HRun=9;HaplotypeScore=59.1052;InbreedingCoeff=0.9341;MQ=78.27;MQ0=1;MQRankSum=-0.691;QD=23.37;ReadPosRankSum=-0.451;VQSLOD=5.4600;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,11:12:33.02:302,33,0	0/0:10,0:10:30.09:0,30,346	0/0:21,0:19:21.55:0,22,261	0/1:16,0:15:8.74:9,0,139	0/0:26,0:27:75.04:0,75,833	1/1:1,23:24:69.04:632,69,0	1/1:2,12:14:30.02:275,30,0	1/1:4,28:32:84:758,84,0	1/1:0,17:17:42.02:384,42,0	0/0:19,1:20:26.72:0,27,559	0/0:23,0:23:60.18:0,60,692	1/1:2,19:21:57.03:522,57,0	1/1:1,21:22:63.03:577,63,0	0/0:37,0:37:99:0,105,1200	0/0:12,0:12:33.08:0,33,362	1/1:0,26:26:78.04:714,78,0	0/0:18,0:18:51.15:0,51,589	0/0:13,0:13:33.07:0,33,367	1/1:5,20:25:60:544,60,0	1/1:2,32:34:96.05:878,96,0	1/1:0,10:10:27.01:247,27,0	1/1:0,13:13:39.02:357,39,0	1/1:1,22:23:63.03:577,63,0	1/1:0,7:7:21.01:192,21,0	0/0:20,0:20:51.11:0,51,567	0/0:25,0:25:75.22:0,75,866	1/1:4,31:35:84.03:768,84,0	0/0:7,0:7:21.06:0,21,242
chr10	50783188	.	GACACACACAC	G	2283.50	PASS	AB=1.000;AC=13;AF=0.241;AN=54;BaseQRankSum=3.959;DP=511;FS=0.000;HRun=0;HaplotypeScore=145.1999;InbreedingCoeff=0.7306;MQ=60.95;MQ0=14;MQRankSum=-4.224;QD=19.19;ReadPosRankSum=0.959;VQSLOD=2.8360;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:34:36.12:0,36,809	0/0:6,0:10:21.07:0,21,771	./.	0/0:28,0:15:9.50:0,10,142	0/0:12,0:16:27.09:0,27,1118	0/0:21,0:21:24.08:0,24,446	0/1:16,0:15:9.53:10,0,111	1/1:14,9:22:3.29:324,3,0	0/0:10,0:10:6.01:0,6,77	0/0:20,0:20:40.01:0,40,1642	0/0:13,0:13:21.05:0,21,752	0/0:13,0:12:18.01:0,18,393	0/0:10,0:10:12.93:0,13,353	0/0:20,0:21:0.34:0,0,1074	0/0:15,0:22:18.23:0,18,392	1/1:6,12:21:25.90:664,26,0	0/0:22,0:24:48.14:0,48,1995	0/0:17,0:19:30.09:0,30,1179	1/1:7,1:10:15.05:342,15,0	1/1:11,13:25:24.35:730,24,0	1/1:8,0:7:2.99:23,3,0	0/0:12,0:12:12.04:0,12,357	0/0:9,0:10:15.04:0,15,343	0/0:22,0:23:33.58:0,34,917	0/0:13,0:18:24.08:0,24,896	0/0:19,0:21:36.12:0,36,1365	1/1:4,11:15:12.04:359,12,0	0/0:10,0:10:12.01:0,12,283
chr10	50783226	.	CACAT	C	1044.69	PASS	AB=0.979;AC=19;AF=0.339;AN=56;BaseQRankSum=8.076;DP=561;FS=15.965;HRun=0;HaplotypeScore=102.1835;InbreedingCoeff=0.2242;MQ=58.69;MQ0=21;MQRankSum=-2.887;QD=3.84;ReadPosRankSum=2.212;VQSLOD=0.6879;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:29,2:30:44.14:44,0,62	0/0:13,0:13:36:0,36,469	0/1:30,0:4:1.79:2,0,15	0/1:19,0:8:0.41:0,0,86	0/0:21,0:20:44.97:0,45,695	1/1:2,17:18:18.06:344,18,0	1/1:4,12:15:9.03:135,9,0	0/0:39,0:35:83.88:0,84,721	1/1:3,8:11:5.89:69,6,0	0/0:25,0:23:68.89:0,69,1181	0/0:16,0:16:41.96:0,42,707	0/1:16,0:15:11.99:102,0,12	1/1:15,0:15:11.21:90,11,0	0/0:21,0:21:25.10:0,25,740	0/0:16,0:16:24.01:0,24,313	0/1:19,0:19:46.28:52,0,46	0/0:31,0:30:41.60:0,42,1299	0/0:22,0:22:45.08:0,45,806	0/0:18,0:17:11.68:0,12,220	0/1:26,0:25:39.30:39,0,147	0/0:13,0:11:8.72:0,9,74	0/1:11,0:11:0.48:11,0,0	0/1:9,1:10:3.89:130,0,4	0/1:21,2:22:80.47:180,0,80	0/0:24,0:24:21.89:0,22,657	0/0:30,0:30:67.94:0,68,1297	0/1:19,0:19:8.85:9,0,161	0/1:6,0:6:7.17:7,0,218
chr10	50783228	.	CAT	C	1462.37	PASS	AB=0.845;AC=19;AF=0.339;AN=56;BaseQRankSum=5.900;DP=564;FS=3.759;HRun=0;HaplotypeScore=87.3333;InbreedingCoeff=0.7644;MQ=58.84;MQ0=19;MQRankSum=-0.603;QD=7.86;ReadPosRankSum=1.160;VQSLOD=2.9829;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:4,27:30:0.99:180,0,1	0/0:13,0:13:24.08:0,24,253	0/1:27,0:4:4.25:4,0,14	0/0:18,0:8:8.62:0,9,96	0/0:21,0:20:25.15:0,25,444	1/1:18,0:17:17.95:148,18,0	1/1:15,0:14:8.99:75,9,0	0/0:40,0:36:74.89:0,75,649	1/1:12,0:11:4.52:24,5,0	0/0:26,0:24:61.52:0,62,824	0/0:17,0:17:41.93:0,42,483	1/1:13,3:15:23.80:272,24,0	1/1:13,3:16:32.76:308,33,0	0/0:21,0:21:41.55:0,42,539	0/0:17,0:17:27:0,27,269	0/0:19,0:19:21.69:0,22,106	0/0:32,0:31:79.73:0,80,947	0/0:22,0:22:26.30:0,26,525	0/0:18,0:17:32.94:0,33,243	0/0:27,0:26:36.26:0,36,211	0/0:14,0:12:11.72:0,12,98	1/1:2,9:11:9.03:129,9,0	1/1:9,0:10:17.91:137,18,0	1/1:21,2:22:36.01:370,36,0	0/0:24,0:24:28.60:0,29,393	0/0:30,0:30:78.87:0,79,782	0/0:19,0:19:29.37:0,29,208	0/1:6,0:6:13.57:14,0,106
chr10	50783380	.	G	GTAA	2813.59	PASS	AB=0.545;AC=13;AF=0.232;AN=56;BaseQRankSum=1.791;DP=451;FS=6.379;HRun=0;HaplotypeScore=76.7515;InbreedingCoeff=0.8564;MQ=72.62;MQ0=2;MQRankSum=-0.813;QD=22.51;ReadPosRankSum=-5.100;VQSLOD=1.2898;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:17:44.86:0,45,646	0/0:4,0:8:7.45:0,7,62	0/0:23,0:15:2.17:0,2,201	0/0:8,0:6:11.40:0,11,86	0/0:17,0:19:53.91:0,54,627	0/0:17,0:21:57.02:0,57,780	0/0:18,0:19:43.32:0,43,703	1/1:9,20:34:87.72:997,88,0	0/0:8,0:9:17.88:0,18,246	0/0:19,0:21:50.96:0,51,768	0/0:14,0:16:48.14:0,48,779	0/0:15,0:16:41.95:0,42,590	0/0:7,0:8:17.93:0,18,260	0/0:12,0:12:23.82:0,24,342	0/1:2,0:12:1.50:1,0,77	1/1:8,3:13:39.06:628,39,0	0/0:11,0:15:38.65:0,39,604	0/0:14,0:17:39.04:0,39,564	1/1:3,0:9:23.89:251,24,0	1/1:0,15:22:50.68:620,51,0	1/1:2,9:12:6.02:145,6,0	0/0:9,0:9:27.07:0,27,427	0/0:11,0:11:30.03:0,30,485	0/0:22,0:25:56.46:0,56,871	0/0:13,0:14:39.03:0,39,587	0/0:20,0:22:53.81:0,54,788	1/1:3,15:23:20.99:352,21,0	0/0:13,0:15:43.95:0,44,459
chr10	50784521	.	A	AGTGTGT	684.39	PASS	AB=1.000;AC=22;AF=0.440;AN=50;BaseQRankSum=-0.266;DP=540;FS=10.939;HRun=0;HaplotypeScore=129.4578;InbreedingCoeff=0.2520;MQ=70.13;MQ0=10;MQRankSum=-2.826;QD=2.54;ReadPosRankSum=-1.724;VQSLOD=1.7975;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:26:17.12:17,0,36	1/1:7,0:6:3:25,3,0	./.	./.	0/0:19,0:19:12.49:0,12,202	0/1:18,0:18:2.96:3,0,36	1/1:16,0:16:0.89:2,1,0	1/1:32,0:32:17.71:154,18,0	0/1:15,0:15:17.62:18,0,25	0/0:18,0:18:14.01:0,14,224	0/0:9,0:9:3.01:0,3,59	1/1:18,0:18:3.41:19,3,0	0/0:9,0:9:2.01:0,2,46	0/0:13,0:12:6.02:0,6,102	0/0:16,0:16:0:0,0,0	1/1:13,3:16:0.89:2,1,0	0/1:13,0:13:6.97:7,0,120	0/0:19,0:19:17.18:0,17,315	1/1:15,0:15:8.82:128,9,0	1/1:17,0:16:12.01:228,12,0	./.	0/1:25,0:24:30.34:30,0,187	0/0:10,0:9:0.47:0,0,1	0/1:37,0:38:14.32:14,0,74	0/0:34,0:33:26.56:0,27,436	0/0:21,0:20:10.21:0,10,316	1/1:11,2:13:6.91:185,7,0	0/0:11,0:11:3.01:0,3,45
chr10	50784564	.	A	ATG	498.81	PASS	AB=1.000;AC=18;AF=0.346;AN=52;BaseQRankSum=1.888;DP=427;FS=19.487;HRun=0;HaplotypeScore=80.9775;InbreedingCoeff=0.5378;MQ=44.92;MQ0=15;MQRankSum=-3.213;QD=3.04;ReadPosRankSum=-3.153;VQSLOD=-0.2289;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:22:10.74:33,0,11	./.	0/0:19,0:11:12.47:0,12,264	0/0:18,0:6:17.97:0,18,202	0/0:15,0:15:30.07:0,30,353	0/1:24,0:22:5.42:34,0,5	1/1:16,0:16:2.97:11,3,0	1/1:11,0:11:16.77:145,17,0	0/1:15,0:12:0:0,0,0	0/0:25,0:24:55.96:0,56,554	0/0:9,0:8:9.03:0,9,115	1/1:20,0:20:0.94:2,1,0	0/0:15,0:15:2.72:0,3,15	0/0:10,0:8:8.56:0,9,100	0/0:14,0:11:0:0,0,0	1/1:12,0:11:0.43:1,0,0	0/0:12,0:11:20.91:0,21,223	0/0:11,0:11:26.93:0,27,259	1/1:6,9:15:21.61:281,22,0	1/1:14,0:13:4.56:45,5,0	./.	0/0:20,0:18:14.74:0,15,88	0/1:10,0:7:0.14:1,0,0	0/0:28,0:28:5.58:0,6,34	0/0:20,0:18:41.57:0,42,387	0/0:25,0:22:56.98:0,57,607	1/1:0,4:4:6.02:92,6,0	0/0:2,0:2:3.45:0,3,22
chr10	50784606	.	G	GGA	44.63	PASS	AB=0.838;AC=20;AF=0.500;AN=40;BaseQRankSum=4.424;DP=224;FS=3.463;HRun=0;HaplotypeScore=43.2459;InbreedingCoeff=0.3356;MQ=37.92;MQ0=5;MQRankSum=-1.326;QD=0.32;ReadPosRankSum=-2.756;VQSLOD=0.7925;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/1:15,0:4:2.19:2,0,6	0/1:22,0:3:2.81:3,0,29	0/0:4,0:4:3.01:0,3,38	1/1:3,10:12:2.96:19,3,0	0/1:7,4:10:0:0,0,0	1/1:9,1:7:3.01:43,3,0	./.	0/0:11,0:10:15:0,15,156	0/0:2,0:2:2.03:0,2,6	0/1:5,4:9:0:0,0,0	./.	0/1:4,0:4:0:0,0,0	1/1:6,0:4:0.47:1,0,0	./.	0/0:9,0:8:2.13:0,2,36	0/0:4,0:3:1.86:0,2,70	1/1:10,0:10:0.47:2,0,0	1/1:6,0:6:1.89:4,2,0	./.	1/1:11,1:10:3:25,3,0	0/1:3,6:7:0:1,0,0	1/1:12,0:10:3.01:46,3,0	0/0:6,0:5:6:0,6,61	0/0:16,0:15:33.27:0,33,400	./.	./.
chr10	50784609	.	G	GGA	43	PASS	AB=1.000;AC=7;AF=0.167;AN=42;BaseQRankSum=4.426;DP=199;FS=4.335;HRun=0;HaplotypeScore=36.3080;InbreedingCoeff=0.2881;MQ=36.81;MQ0=4;MQRankSum=-0.581;QD=1.19;ReadPosRankSum=0.152;VQSLOD=1.0092;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:15,0:4:1.03:0,1,37	0/0:22,0:3:4.58:0,5,54	0/0:3,0:3:3.01:0,3,49	0/0:13,0:11:8.93:0,9,83	1/1:9,0:8:0.89:3,1,0	0/0:8,0:5:8.85:0,9,117	0/0:3,0:2:3.01:0,3,46	0/0:9,0:8:21.07:0,21,335	0/0:2,0:2:3.01:0,3,48	./.	0/0:9,0:9:6.02:0,6,88	0/1:4,0:4:0:0,0,0	0/0:4,2:4:5.98:0,6,53	./.	0/0:8,0:7:8.83:0,9,107	0/0:4,0:3:9.03:0,9,134	0/1:8,0:8:33.27:33,0,132	1/1:3,3:6:11.65:101,12,0	./.	0/0:10,0:8:5.47:0,5,50	0/1:9,0:7:0:1,0,0	0/0:9,0:8:1.25:0,1,3	0/0:4,0:4:6.02:0,6,98	0/0:16,0:15:45.07:0,45,694	./.	./.
chr10	50784724	.	A	AT	1450.67	PASS	AB=0.664;AC=13;AF=0.232;AN=56;BaseQRankSum=1.637;DP=608;FS=9.936;HRun=0;HaplotypeScore=170.4076;InbreedingCoeff=0.6288;MQ=53.28;MQ0=13;MQRankSum=-6.451;QD=11.70;ReadPosRankSum=0.528;VQSLOD=4.0864;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:31.84:0,32,215	1/1:1,4:5:5.61:88,6,0	0/0:24,0:10:27.08:0,27,358	0/0:43,0:22:63.07:0,63,801	0/0:28,0:25:48.11:0,48,662	0/0:21,0:20:23.59:0,24,153	0/0:27,0:24:29.95:0,30,196	0/1:21,14:34:99:593,0,190	0/0:28,0:26:54.41:0,54,358	0/0:26,0:24:57.52:0,58,698	0/0:20,0:19:45.11:0,45,620	0/0:27,0:26:32.90:0,33,217	0/0:19,0:18:44.92:0,45,323	0/0:20,0:20:35.15:0,35,461	1/1:7,11:16:5.68:76,6,0	1/1:10,7:15:9.03:123,9,0	0/0:22,0:22:42.59:0,43,563	0/0:12,0:11:27.09:0,27,357	0/1:2,5:7:10.35:232,0,10	1/1:8,7:15:8.43:178,8,0	1/1:1,10:11:3.90:43,4,0	0/0:27,0:25:32.27:0,32,195	0/0:13,0:12:14.64:0,15,86	0/0:31,0:30:41.22:0,41,258	0/0:27,0:27:45.15:0,45,622	0/0:32,0:29:75.66:0,76,803	0/1:9,7:15:3.39:279,0,3	0/0:15,0:14:29.99:0,30,345
chr10	50784725	.	G	GATT	3443.25	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=2.590;DP=594;FS=47.238;HRun=0;HaplotypeScore=220.8116;InbreedingCoeff=0.9341;MQ=53.95;MQ0=13;MQRankSum=-10.770;QD=28.93;ReadPosRankSum=-6.131;VQSLOD=1.4786;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:25.02:0,25,138	1/1:5,0:5:13.99:175,14,0	0/0:24,0:10:30.09:0,30,485	0/0:43,0:22:62.84:0,63,986	0/0:28,0:25:48.16:0,48,839	0/0:20,0:19:20.02:0,20,113	0/0:27,0:24:3.69:0,4,123	1/1:25,0:24:57.19:1227,57,0	0/0:28,0:26:52.12:0,52,298	0/0:26,0:24:22.33:0,22,678	0/0:19,0:18:45.15:0,45,776	0/0:26,0:25:28.50:0,29,165	0/0:18,0:17:19.99:0,20,234	0/0:19,0:19:33.11:0,33,570	1/1:18,1:17:29.55:264,30,0	1/1:16,2:16:29.22:310,29,0	0/0:22,0:22:31.53:0,32,710	0/0:12,0:11:27.09:0,27,430	1/1:9,0:9:3.18:371,3,0	1/1:12,1:14:21.50:331,22,0	1/1:13,0:13:23.41:188,23,0	0/0:27,0:25:31.18:0,31,158	0/0:12,0:12:14.24:0,14,70	0/0:30,0:29:39.88:0,40,214	0/0:26,0:26:45.15:0,45,780	0/0:30,0:27:47.84:0,48,780	1/1:12,4:15:34.04:577,34,0	0/0:15,0:14:23.16:0,23,345
chr10	50785760	.	C	CAA	9316.70	PASS	AB=0.529;AC=15;AF=0.268;AN=56;BaseQRankSum=1.596;DP=595;FS=2.936;HRun=0;HaplotypeScore=70.8314;InbreedingCoeff=0.9503;MQ=78.36;MQ0=1;MQRankSum=-1.988;QD=55.46;ReadPosRankSum=0.480;VQSLOD=4.9760;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:42.14:0,42,685	1/1:1,8:10:27.05:508,27,0	0/0:17,0:17:42.09:0,42,599	0/0:13,0:14:32.14:0,32,442	0/0:27,0:27:81.28:0,81,1321	0/0:31,0:30:93.32:0,93,1510	0/0:19,0:19:54.18:0,54,880	1/1:3,28:32:96.31:1908,96,0	0/0:14,0:14:42.14:0,42,684	0/0:23,0:23:66.22:0,66,1055	0/0:26,0:26:72.18:0,72,1098	0/0:16,0:16:48.15:0,48,759	0/0:27,0:27:75.24:0,75,1195	0/0:26,0:26:78.25:0,78,1248	1/1:0,20:21:57.20:1159,57,0	0/1:2,16:18:0.79:826,0,1	0/0:23,0:23:69.18:0,69,1069	0/0:15,0:15:45.15:0,45,734	1/1:1,15:16:48.16:976,48,0	1/1:2,28:30:84.29:1684,84,0	1/1:1,8:9:21.07:427,21,0	0/0:23,0:23:66.23:0,66,1076	0/0:21,0:21:63.22:0,63,1027	0/0:12,0:12:36.11:0,36,561	0/0:21,0:21:63.22:0,63,1028	0/0:33,0:33:96.33:0,96,1565	1/1:0,32:30:90.31:1829,90,0	0/0:25,0:25:75.26:0,75,1223
chr10	50786045	.	G	GA	492.15	PASS	AB=0.909;AC=5;AF=0.089;AN=56;BaseQRankSum=-3.338;DP=504;FS=1.776;HRun=9;HaplotypeScore=49.8971;InbreedingCoeff=0.8350;MQ=83.04;MQ0=0;MQRankSum=-2.164;QD=12.95;ReadPosRankSum=0.827;VQSLOD=3.0282;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:71.98:0,72,625	1/1:1,6:8:20.89:213,21,0	0/0:16,0:17:20.86:0,21,264	0/0:17,0:18:34.75:0,35,285	0/0:28,0:28:69.87:0,70,600	0/0:24,1:25:32.80:0,33,514	0/1:9,1:10:3.19:3,0,204	0/0:27,0:27:71.97:0,72,623	0/0:19,0:19:50.97:0,51,439	0/0:13,0:13:26.99:0,27,234	0/0:26,0:26:68.98:0,69,599	0/0:13,0:13:35.97:0,36,309	0/0:18,0:18:44.99:0,45,391	0/0:15,0:15:41.99:0,42,365	1/1:4,16:20:36.10:398,36,0	0/0:13,0:13:35.98:0,36,313	0/0:27,0:27:68.96:0,69,599	0/0:14,0:14:35.99:0,36,313	0/0:28,0:28:71.95:0,72,619	0/0:18,0:18:47.99:0,48,417	0/0:11,0:11:29.99:0,30,260	0/0:20,0:20:23.50:0,24,366	0/0:15,0:15:38.99:0,39,339	0/0:8,0:8:20.99:0,21,182	0/0:18,0:18:41.98:0,42,365	0/0:18,0:18:44.98:0,45,388	0/0:17,0:17:47.99:0,48,417	0/0:13,0:13:38.99:0,39,339
chr10	50787457	.	TA	T	13842.07	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=10.254;DP=814;FS=2.848;HRun=2;HaplotypeScore=98.7171;InbreedingCoeff=0.9999;MQ=89.57;MQ0=0;MQRankSum=-3.481;QD=37.01;ReadPosRankSum=4.608;VQSLOD=5.0229;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,57:57:99:2064,160,0	1/1:1,16:17:45.15:584,45,0	0/0:37,0:37:99:0,111,1556	0/0:26,0:26:62.64:0,63,836	0/0:28,0:28:84.25:0,84,1218	1/1:0,24:24:69.22:896,69,0	1/1:0,36:36:99:1363,105,0	0/0:30,0:30:90.30:0,90,1331	1/1:0,30:30:90.29:1169,90,0	0/0:33,0:33:96.32:0,96,1422	0/0:28,0:28:81.24:0,81,1153	1/1:2,35:37:96.31:1243,96,0	1/1:1,36:37:99:1363,105,0	0/0:34,0:34:99:0,102,1526	1/1:0,28:28:81.26:1052,81,0	1/1:0,23:23:69.22:896,69,0	0/0:21,0:21:63.20:0,63,924	0/0:18,0:18:51.17:0,51,764	0/0:23,0:23:66.18:0,66,946	0/0:29,0:29:84.26:0,84,1219	0/0:24,0:24:72.24:0,72,1079	1/1:1,24:25:75.19:954,75,0	1/1:1,27:28:78.25:1013,78,0	1/1:0,32:32:96.31:1246,96,0	0/0:33,0:33:99:0,99,1466	0/0:34,0:34:99:0,99,1484	0/0:32,0:32:96.30:0,96,1396	0/0:10,0:10:30.10:0,30,450
chr10	50788293	.	G	GGTGTGTGTGTGT	13024.65	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-1.861;DP=689;FS=6.066;HRun=0;HaplotypeScore=233.6969;InbreedingCoeff=0.8857;MQ=66.57;MQ0=11;MQRankSum=-9.006;QD=36.48;ReadPosRankSum=-5.177;VQSLOD=3.1047;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:27:18.39:645,18,0	0/0:5,0:14:15.28:0,15,450	0/0:40,0:22:7.43:0,7,83	0/0:34,0:24:1.38:0,1,48	0/0:19,0:18:33.10:0,33,1006	1/1:10,8:18:12.04:646,12,0	1/1:19,7:31:23.30:943,23,0	1/1:30,0:30:41.40:863,41,0	1/1:17,10:27:30.57:1618,31,0	0/0:25,0:25:27.09:0,27,757	0/0:24,0:23:30.10:0,30,922	1/1:8,9:20:18.06:859,18,0	1/1:18,9:30:32.65:1698,33,0	0/0:15,0:16:33.11:0,33,1060	0/0:18,0:35:24.12:0,24,512	1/1:17,3:22:34.34:1356,34,0	0/0:23,0:24:13.50:0,13,844	0/0:27,0:27:30.16:0,30,1315	1/1:13,0:12:18.06:649,18,0	1/1:21,0:29:19.95:1238,20,0	1/1:23,0:23:12.02:327,12,0	1/1:8,0:14:6.02:233,6,0	1/1:11,10:22:9.03:487,9,0	1/1:11,6:18:3.01:175,3,0	0/0:29,0:33:66.21:0,66,2004	0/0:30,0:34:27.83:0,28,1058	1/1:30,0:31:30.03:1288,30,0	0/0:4,0:5:9.03:0,9,205
chr10	50788314	.	G	GTGTGTGTGTGTGTGTG	7367.07	PASS	AB=0.990;AC=29;AF=0.518;AN=56;BaseQRankSum=-0.165;DP=643;FS=1.735;HRun=0;HaplotypeScore=252.0150;InbreedingCoeff=0.7496;MQ=54.51;MQ0=14;MQRankSum=-6.417;QD=19.80;ReadPosRankSum=-3.469;VQSLOD=3.3822;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:25:5.80:125,0,6	0/0:14,0:14:15.28:0,15,644	0/0:34,0:15:7.46:0,7,82	0/1:31,0:19:12.91:13,0,41	0/0:20,0:19:33.10:0,33,1224	1/1:17,0:17:6.02:257,6,0	1/1:29,0:29:17.54:473,18,0	1/1:30,0:30:33:510,33,0	1/1:20,0:20:21.96:903,22,0	0/0:20,0:20:27.09:0,27,924	0/0:19,0:18:30.10:0,30,1118	1/1:21,0:20:15.05:564,15,0	1/1:27,0:27:21.07:816,21,0	0/0:14,0:14:33.11:0,33,1296	0/0:27,0:27:21.92:0,22,812	1/1:24,0:24:39.07:1130,39,0	0/0:27,0:26:11.12:0,11,1014	0/0:29,0:27:7.69:0,8,1556	1/1:14,0:13:11.25:256,11,0	1/1:28,0:28:9.50:624,10,0	1/1:22,0:22:15.02:562,15,0	1/1:17,0:17:6.02:177,6,0	1/1:22,0:22:9.03:359,9,0	0/1:15,0:15:0:0,0,0	0/0:33,0:33:66.21:0,66,2467	0/0:28,0:28:12.60:0,13,1368	1/1:18,6:28:11.39:598,11,0	0/0:6,0:5:9.03:0,9,261
chr10	50790595	.	AAC	A	13223.45	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=13.482;DP=877;FS=2.959;HRun=0;HaplotypeScore=115.0309;InbreedingCoeff=0.9660;MQ=65.57;MQ0=14;MQRankSum=2.241;QD=23.91;ReadPosRankSum=5.406;VQSLOD=5.5134;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,43:54:84.24:1051,84,0	1/1:4,10:14:18.06:225,18,0	0/0:39,0:26:21.02:0,21,702	0/0:37,0:20:39.08:0,39,558	0/0:30,0:30:90.24:0,90,1442	1/1:0,23:22:60.19:751,60,0	1/1:6,20:26:50.71:637,51,0	1/1:12,28:40:84.19:1033,84,0	1/1:2,28:30:63.20:788,63,0	0/0:26,0:26:72.23:0,72,1125	0/0:32,0:32:87.30:0,87,1414	1/1:7,27:34:63.03:764,63,0	1/1:5,21:26:57.18:709,57,0	0/0:34,1:35:52.78:0,53,1378	1/1:6,24:31:56.97:672,57,0	1/1:3,25:24:48.15:600,48,0	0/0:31,0:31:81.20:0,81,1244	0/0:17,1:18:1.61:0,2,556	1/1:7,17:23:31.72:532,32,0	1/1:2,31:33:75.24:938,75,0	1/1:7,41:46:58.54:1195,59,0	1/1:6,19:26:45.14:563,45,0	1/1:5,29:34:19.70:776,20,0	1/1:8,46:53:99:1351,108,0	0/0:29,0:29:75.25:0,75,1209	0/0:37,1:38:55.70:0,56,1334	1/1:5,23:28:51.16:638,51,0	0/0:9,0:8:21.07:0,21,343
chr10	50791699	.	TCA	T	1513.32	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.631;DP=657;FS=8.989;HRun=0;HaplotypeScore=75.5968;InbreedingCoeff=0.9971;MQ=83.54;MQ0=0;MQRankSum=-3.453;QD=35.19;ReadPosRankSum=1.542;VQSLOD=5.8691;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:66.23:0,66,1236	1/1:0,15:15:45.15:663,45,0	0/0:24,0:24:69.24:0,69,1279	0/0:14,0:14:30.10:0,30,549	0/0:25,0:25:75.23:0,75,1343	0/0:36,0:36:99:0,102,1877	0/0:8,0:8:21.07:0,21,386	0/0:35,0:35:99:0,99,1841	0/0:24,0:24:72.23:0,72,1308	0/0:40,0:40:99:0,120,2238	0/0:25,0:25:66.23:0,66,1235	0/0:22,0:22:63.20:0,63,1142	0/0:25,0:25:75.26:0,75,1398	0/0:29,0:29:84.27:0,84,1540	1/1:1,27:28:66.22:972,66,0	0/0:18,0:18:54.19:0,54,1011	0/0:18,0:18:48.16:0,48,899	0/0:11,0:11:30.10:0,30,561	0/0:20,0:20:60.21:0,60,1115	0/0:38,0:38:99:0,111,2055	0/0:25,0:25:75.24:0,75,1343	0/0:20,0:20:57.20:0,57,1068	0/0:24,0:24:69.24:0,69,1292	0/0:14,0:14:42.14:0,42,763	0/0:29,0:29:78.27:0,78,1461	0/0:27,0:27:81.28:0,81,1518	0/0:28,0:28:81.28:0,81,1501	0/0:10,0:10:30.10:0,30,562
chr10	50796174	.	CAA	C	4854.90	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=3.069;DP=562;FS=2.581;HRun=12;HaplotypeScore=87.2519;InbreedingCoeff=0.9875;MQ=71.64;MQ0=2;MQRankSum=-2.261;QD=22.79;ReadPosRankSum=5.230;VQSLOD=4.7914;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,20:23:48.09:488,48,0	1/1:4,9:14:23.73:296,24,0	0/0:21,0:18:37.39:0,37,398	0/0:14,0:10:10.12:0,10,67	0/0:17,0:17:39.12:0,39,551	1/1:4,14:18:39.05:396,39,0	1/1:2,10:12:27.06:275,27,0	0/0:25,0:29:57.14:0,57,728	1/1:4,13:17:39.07:393,39,0	0/0:21,0:24:50.65:0,51,702	0/0:18,0:21:50.11:0,50,634	1/1:4,8:12:20.82:202,21,0	1/1:3,13:17:33.67:437,34,0	0/0:25,0:25:60.20:0,60,871	1/1:5,11:17:41.81:408,42,0	1/1:1,17:17:42.02:427,42,0	0/0:31,0:30:81.05:0,81,1141	0/0:32,0:34:75.52:0,76,983	0/0:23,0:23:45.09:0,45,609	0/0:26,0:29:84.21:0,84,1097	0/0:10,0:10:27.98:0,28,404	1/1:3,13:18:41.55:390,42,0	1/1:5,20:27:62.60:673,63,0	1/1:3,16:20:47.82:469,48,0	0/0:17,0:23:56.64:0,57,727	0/0:22,0:22:55.70:0,56,737	0/0:18,0:19:51.15:0,51,705	0/0:4,0:5:11.53:0,12,143
chr10	50796218	.	CAA	C	3481.98	PASS	AB=0.947;AC=15;AF=0.268;AN=56;BaseQRankSum=2.157;DP=597;FS=6.377;HRun=11;HaplotypeScore=97.9819;InbreedingCoeff=0.9048;MQ=63.33;MQ0=2;MQRankSum=0.895;QD=21.49;ReadPosRankSum=1.162;VQSLOD=3.0985;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:68.71:0,69,1003	1/1:2,10:12:30.05:319,30,0	0/0:28,0:20:26.80:0,27,190	0/1:17,1:11:15.50:15,0,110	0/0:15,0:16:42.13:0,42,608	0/0:18,0:18:44.74:0,45,657	0/0:17,0:17:51.15:0,51,744	1/1:9,24:33:69.10:722,69,0	0/0:11,0:12:26.51:0,27,308	0/0:29,0:30:69.20:0,69,970	0/0:19,0:21:50.14:0,50,710	0/0:16,0:16:39.12:0,39,578	0/0:20,0:20:51.11:0,51,713	0/0:19,0:20:53.53:0,54,770	1/1:2,16:19:47.85:491,48,0	0/0:18,0:19:47.64:0,48,681	0/0:40,0:38:99:0,111,1610	0/0:27,0:29:74.72:0,75,1077	1/1:1,22:23:60.14:631,60,0	1/1:3,21:24:60.13:637,60,0	1/1:3,13:15:27.05:287,27,0	0/0:16,0:16:39.08:0,39,549	0/0:29,0:29:87.27:0,87,1265	0/0:22,0:22:51.17:0,51,785	0/0:23,0:24:54.18:0,54,810	0/0:19,0:22:56.16:0,56,781	1/1:3,14:17:33.98:380,34,0	0/0:6,0:7:11.50:0,11,104
chr10	50797846	.	AT	A	12609.88	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=14.141;DP=743;FS=2.739;HRun=6;HaplotypeScore=72.3922;InbreedingCoeff=0.9999;MQ=85.71;MQ0=0;MQRankSum=-1.888;QD=28.34;ReadPosRankSum=2.138;VQSLOD=5.6924;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,37:39:99:1114,105,0	1/1:1,16:17:45.11:483,45,0	0/0:31,0:31:87.19:0,87,1036	0/0:16,0:16:38.99:0,39,483	0/0:39,0:39:99:0,108,1391	1/1:1,30:31:78.19:838,78,0	1/1:0,22:22:60.15:644,60,0	1/1:4,23:27:69.16:733,69,0	1/1:2,29:31:81.20:871,81,0	0/0:36,0:36:99:0,108,1384	0/0:24,0:24:66.20:0,66,854	1/1:3,20:23:60.15:645,60,0	1/1:2,31:33:90.22:967,90,0	0/0:32,0:32:93.29:0,93,1197	1/1:6,24:30:69.17:742,69,0	1/1:2,22:24:63.16:677,63,0	0/0:24,0:24:66.21:0,66,868	0/0:12,0:12:33.11:0,33,433	1/1:1,23:24:69.14:719,69,0	1/1:2,27:29:75.13:793,75,0	1/1:0,15:15:42.11:451,42,0	1/1:0,24:24:72.18:773,72,0	1/1:3,25:28:66.17:709,66,0	1/1:0,24:24:69.17:742,69,0	0/0:28,0:28:84.25:0,84,1076	0/0:42,0:42:99:0,120,1554	1/1:0,24:24:66.17:709,66,0	0/0:14,0:14:42.14:0,42,552
chr10	50799221	.	T	TAATA	3084.91	PASS	AC=10;AF=0.192;AN=52;BaseQRankSum=-5.453;DP=291;FS=0.000;HRun=0;HaplotypeScore=46.5265;InbreedingCoeff=0.7778;MQ=71.32;MQ0=2;MQRankSum=-0.663;QD=37.17;ReadPosRankSum=-3.431;VQSLOD=2.6229;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:29.12:0,29,423	0/0:10,0:10:18.06:0,18,279	0/0:8,0:7:9.01:0,9,122	0/0:8,0:8:6.02:0,6,96	0/0:10,0:10:12.04:0,12,191	0/0:22,0:22:54.17:0,54,846	./.	1/1:11,22:33:72.24:1498,72,0	0/0:4,0:4:6.02:0,6,87	0/0:8,0:8:15.05:0,15,247	0/0:8,0:8:9.03:0,9,136	0/0:5,0:5:9.03:0,9,146	0/0:7,0:7:9.03:0,9,148	0/0:3,0:3:6.02:0,6,86	0/0:15,0:15:24.07:0,24,355	0/0:6,0:6:6.02:0,6,99	0/0:9,0:9:24.08:0,24,370	0/0:12,0:12:26.96:0,27,401	1/1:7,13:22:48.12:867,48,0	1/1:6,4:10:12.04:220,12,0	1/1:0,3:3:9.03:221,9,0	0/0:5,0:5:6.02:0,6,96	0/0:6,0:6:6.02:0,6,83	./.	0/0:10,0:10:12.04:0,12,198	0/0:18,0:18:36.12:0,36,580	1/1:3,10:13:18.06:441,18,0	0/0:15,0:15:27.09:0,27,430
chr10	50804247	.	A	AT	5127.08	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=10.438;DP=542;FS=0.709;HRun=9;HaplotypeScore=93.7225;InbreedingCoeff=0.9721;MQ=72.13;MQ0=0;MQRankSum=0.730;QD=18.38;ReadPosRankSum=-2.300;VQSLOD=4.0834;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:16:24.74:156,25,0	0/0:18,0:18:35.14:0,35,140	0/0:9,0:9:8.94:0,9,67	0/0:12,0:10:5.70:0,6,37	0/0:26,0:26:68.93:0,69,585	1/1:20,0:20:53.61:282,54,0	1/1:13,0:13:19.12:145,19,0	1/1:5,28:33:83.92:837,84,0	1/1:15,0:15:28.46:154,28,0	0/0:45,0:45:99:0,129,1112	0/0:35,0:35:83.95:0,84,725	1/1:22,0:22:14.79:245,15,0	1/1:10,0:10:25.70:146,26,0	0/0:11,0:11:29.99:0,30,260	0/0:22,0:22:46.88:0,47,158	1/1:18,0:18:43.37:261,43,0	0/0:18,0:18:47.90:0,48,402	0/0:18,0:18:47.84:0,48,395	1/1:5,14:20:45.46:472,45,0	1/1:5,23:28:66.06:686,66,0	1/1:1,13:15:36.96:386,37,0	1/1:12,0:12:32.02:191,32,0	1/1:19,0:19:48.67:277,49,0	1/1:10,0:10:23.29:141,23,0	0/0:19,0:19:50.98:0,51,443	0/0:20,0:20:50.98:0,51,441	1/1:3,24:28:69.16:748,69,0	0/0:10,0:10:23.99:0,24,208
chr10	50804256	.	TAA	T	4824.08	PASS	AB=0.526;AC=23;AF=0.411;AN=56;BaseQRankSum=8.135;DP=540;FS=3.785;HRun=6;HaplotypeScore=107.8886;InbreedingCoeff=0.9483;MQ=69.24;MQ0=0;MQRankSum=-2.120;QD=24.24;ReadPosRankSum=4.592;VQSLOD=3.1466;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,12:14:29.95:362,30,0	1/1:1,0:16:31.20:150,31,0	0/0:6,0:6:11.80:0,12,159	0/0:11,0:9:14.25:0,14,144	0/0:25,0:25:72.21:0,72,1163	1/1:1,20:21:51.17:679,51,0	1/1:2,9:12:23.81:292,24,0	0/0:31,0:31:66.28:0,66,266	1/1:2,12:14:30.09:387,30,0	0/0:45,0:45:99:0,129,2225	0/0:34,0:34:99:0,102,1738	0/1:2,17:20:1.44:547,0,1	1/1:1,11:12:24.08:319,24,0	0/0:10,0:10:30.10:0,30,523	1/1:1,0:23:56.34:264,56,0	1/1:1,19:20:39.13:519,39,0	0/0:25,0:25:63.21:0,63,1051	0/0:18,0:18:54.14:0,54,897	0/0:16,0:16:33.39:0,33,152	0/0:30,0:30:65.14:0,65,276	0/0:16,0:16:31.47:0,31,128	1/1:0,15:15:36.11:468,36,0	1/1:2,22:24:41.98:559,42,0	1/1:1,7:8:21.07:279,21,0	0/0:19,0:19:57.20:0,57,992	0/0:18,0:18:54.18:0,54,916	0/0:29,0:29:67.41:0,67,319	0/0:8,0:8:24.08:0,24,419
chr10	50806106	.	A	AT	9778.15	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-8.263;DP=547;FS=0.741;HRun=8;HaplotypeScore=56.3856;InbreedingCoeff=0.9904;MQ=78.94;MQ0=0;MQRankSum=-1.073;QD=27.70;ReadPosRankSum=0.459;VQSLOD=5.2915;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,24:28:57.17:658,57,0	1/1:4,17:21:51.15:589,51,0	0/0:15,0:15:17.55:0,18,166	0/0:10,0:10:11.94:0,12,135	0/0:23,0:23:57.02:0,57,521	1/1:0,19:19:54.16:623,54,0	1/1:0,14:14:30.09:346,30,0	1/1:6,18:24:54.09:580,54,0	1/1:3,15:18:42.02:466,42,0	0/0:24,0:24:54.02:0,54,491	0/0:14,0:14:42.02:0,42,384	1/1:2,20:23:60.17:682,60,0	1/1:1,15:16:14.66:422,15,0	0/0:19,0:19:45:0,45,408	1/1:2,17:19:48.14:554,48,0	1/1:3,16:19:48.14:554,48,0	0/0:28,0:28:75.04:0,75,686	0/0:14,0:14:29.98:0,30,268	1/1:7,17:24:51.13:577,51,0	1/1:3,20:23:60.14:677,60,0	1/1:4,14:19:44.97:499,45,0	1/1:0,17:17:48.13:546,48,0	1/1:1,21:22:60.18:692,60,0	1/1:2,15:17:42.12:485,42,0	0/0:20,0:20:54.02:0,54,494	0/0:21,0:21:57.01:0,57,518	1/1:6,24:30:72.21:829,72,0	0/0:6,0:6:18.01:0,18,165
chr10	50806497	.	AACAC	A	1008.91	PASS	AB=0.834;AC=16;AF=0.296;AN=54;BaseQRankSum=3.736;DP=556;FS=0.812;HRun=0;HaplotypeScore=99.3361;InbreedingCoeff=0.3945;MQ=67.96;MQ0=13;MQRankSum=2.140;QD=4.92;ReadPosRankSum=1.652;VQSLOD=2.0775;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:28:22.87:58,0,23	0/0:15,0:16:20.44:0,20,345	./.	0/0:26,0:19:0:0,0,0	0/0:17,0:17:15.05:0,15,288	1/1:13,6:17:6.02:93,6,0	0/1:11,3:15:0.45:111,0,0	0/0:28,0:26:8.99:0,9,109	1/1:13,6:19:9.03:139,9,0	0/0:20,0:20:26.82:0,27,451	0/0:18,0:18:17.79:0,18,262	0/1:10,3:13:31.61:38,0,32	0/1:10,6:16:27.31:170,0,27	0/0:22,0:21:17.71:0,18,240	0/0:28,0:28:30.08:0,30,542	0/1:15,6:21:11.98:152,0,12	0/0:26,0:27:35.32:0,35,458	0/0:19,0:19:19.99:0,20,469	0/0:9,0:9:0.47:0,0,1	0/0:18,0:21:8.96:0,9,157	0/0:17,0:16:21.07:0,21,430	1/1:12,3:14:6.02:78,6,0	1/1:14,6:20:5.82:92,6,0	1/1:8,7:16:15.05:232,15,0	0/0:15,0:14:15.05:0,15,302	0/0:28,0:28:29.81:0,30,456	0/0:12,0:17:8.86:0,9,176	0/1:20,0:20:11.80:12,0,461
chr10	50809448	.	CACACACACACACACAT	C	4253.12	PASS	AB=0.996;AC=18;AF=0.321;AN=56;BaseQRankSum=5.565;DP=731;FS=17.357;HRun=0;HaplotypeScore=275.7547;InbreedingCoeff=0.3265;MQ=54.61;MQ0=9;MQRankSum=-2.087;QD=12.85;ReadPosRankSum=-3.630;VQSLOD=1.5772;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:36:7.74:0,8,110	0/0:17,0:17:26.90:0,27,1592	0/0:24,0:10:21.05:0,21,322	0/0:34,0:15:10.31:0,10,413	0/0:31,0:31:63.16:0,63,3404	0/1:22,0:22:27.28:27,0,51	0/1:20,0:20:23.94:24,0,43	1/1:15,22:35:62.50:627,62,0	0/1:30,0:30:16.42:16,0,133	0/0:28,0:28:75.22:0,75,4034	0/0:22,0:22:25.43:0,25,1731	0/1:20,0:20:45.20:224,0,45	0/1:23,0:23:74.91:266,0,75	0/0:27,0:27:48.16:0,48,2436	0/0:41,0:41:54.17:0,54,3202	0/0:24,0:24:11.03:0,11,80	0/0:25,0:25:60.12:0,60,3438	0/0:24,0:23:61.86:0,62,2961	1/1:7,10:16:28.99:345,29,0	1/1:16,5:20:35.72:888,36,0	1/1:31,0:31:24:245,24,0	0/1:21,0:21:99:140,0,180	0/1:26,1:27:80.39:169,0,80	0/1:31,0:31:99:112,0,135	0/0:28,0:27:72.04:0,72,2974	0/0:26,0:26:69.17:0,69,3481	1/1:26,5:31:64.94:1170,65,0	0/0:12,0:12:30.08:0,30,1599
chr10	50809452	.	CACACACACACAT	C	6238.22	PASS	AB=0.957;AC=29;AF=0.518;AN=56;BaseQRankSum=7.141;DP=733;FS=16.132;HRun=0;HaplotypeScore=227.1125;InbreedingCoeff=0.8902;MQ=55.15;MQ0=10;MQRankSum=-4.838;QD=16.25;ReadPosRankSum=-2.325;VQSLOD=2.2139;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:37,0:36:2.56:49,3,0	0/0:17,0:17:26.27:0,26,1112	0/0:25,0:12:23.18:0,23,248	0/0:40,0:19:16.53:0,17,291	0/0:29,0:29:60.15:0,60,2476	0/1:21,1:22:11.77:150,0,12	1/1:18,1:19:9.03:203,9,0	1/1:34,0:32:65.63:537,66,0	1/1:28,1:29:20.43:356,20,0	0/0:30,0:30:80.34:0,80,2931	0/0:20,0:20:25.94:0,26,1272	1/1:13,4:17:30.03:663,30,0	1/1:6,16:22:17.84:599,18,0	0/0:26,0:26:54.15:0,54,1741	0/0:40,0:40:57.14:0,57,2386	1/1:23,0:23:17.59:296,18,0	0/0:26,0:26:60.08:0,60,2518	0/0:25,0:24:63.07:0,63,2212	1/1:16,0:15:29:297,29,0	1/1:21,0:20:33.04:651,33,0	1/1:32,0:31:27.86:228,28,0	1/1:23,1:24:27.22:381,27,0	1/1:10,17:27:12.92:414,13,0	1/1:25,7:32:39.90:577,40,0	0/0:30,0:30:44.20:0,44,2027	0/0:28,0:28:72.16:0,72,2672	1/1:29,0:29:65.34:839,65,0	0/0:12,0:12:26.98:0,27,1148
chr10	50809454	.	CACACACACAT	C	5995.49	PASS	AB=0.611;AC=29;AF=0.518;AN=56;BaseQRankSum=6.479;DP=729;FS=14.512;HRun=0;HaplotypeScore=205.4158;InbreedingCoeff=0.8875;MQ=55.47;MQ0=11;MQRankSum=-6.089;QD=15.95;ReadPosRankSum=-2.363;VQSLOD=2.4806;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:9,27:35:2.82:94,3,0	0/0:17,0:17:26.45:0,26,888	0/0:28,0:13:29.19:0,29,313	0/0:42,0:21:15.15:0,15,262	0/0:27,0:27:60.12:0,60,2061	0/1:8,14:22:10.86:160,0,11	1/1:8,10:18:9.03:259,9,0	1/1:33,0:31:66.65:525,67,0	1/1:7,19:26:20.85:574,21,0	0/0:29,0:29:55.98:0,56,2421	0/0:22,0:22:29.24:0,29,1059	1/1:18,0:18:33.02:520,33,0	1/1:21,0:21:18.95:421,19,0	0/0:24,0:25:54.14:0,54,1351	0/0:40,0:40:57.14:0,57,2019	1/1:4,21:25:17.82:567,18,0	0/0:26,0:26:60.08:0,60,2169	0/0:25,0:24:61.77:0,62,1895	1/1:15,0:14:29:283,29,0	1/1:21,0:20:33.04:567,33,0	1/1:32,0:31:29.96:250,30,0	1/1:24,0:24:25.35:300,25,0	1/1:26,0:26:12.45:299,12,0	1/1:32,0:32:39.89:444,40,0	0/0:33,0:32:11.77:0,12,1577	0/0:27,0:27:71.29:0,71,2272	1/1:27,0:27:65.26:732,65,0	0/0:12,0:12:26.92:0,27,947
chr10	50811558	.	CT	C	3929.66	PASS	AB=0.713;AC=33;AF=0.589;AN=56;BaseQRankSum=7.831;DP=583;FS=1.724;HRun=12;HaplotypeScore=67.2233;InbreedingCoeff=0.7276;MQ=64.17;MQ0=7;MQRankSum=-0.158;QD=10.77;ReadPosRankSum=2.317;VQSLOD=3.3497;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,27:37:0.68:435,1,0	1/1:2,1:8:9.09:41,9,0	0/0:23,0:10:11.96:0,12,99	0/0:19,0:10:8.77:0,9,59	0/0:33,0:34:65.03:0,65,676	1/1:5,14:19:38.75:295,39,0	1/1:6,20:27:13.41:276,13,0	1/1:12,16:27:8.93:227,9,0	0/1:3,7:10:6.53:139,0,7	0/0:19,0:19:39.05:0,39,384	0/0:24,1:25:29.65:0,30,430	1/1:10,8:18:29.81:226,30,0	1/1:4,9:13:26.87:209,27,0	0/0:14,1:20:18.78:0,19,349	1/1:1,0:29:48.89:141,49,0	1/1:1,12:13:29.88:232,30,0	0/0:21,2:24:32.77:0,33,481	0/1:22,1:24:7.13:7,0,271	1/1:11,12:23:8.35:241,8,0	1/1:5,15:19:38.79:297,39,0	1/1:2,9:11:17.92:139,18,0	0/1:4,9:12:12.52:98,0,13	1/1:4,21:26:35.54:278,36,0	1/1:3,17:20:14.84:255,15,0	0/0:19,0:19:24.87:0,25,433	0/0:20,1:23:39.09:0,39,500	1/1:5,18:23:50.78:394,51,0	0/0:9,0:9:18.04:0,18,183
chr10	50811969	.	T	TAA	7572.25	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-13.652;DP=697;FS=5.613;HRun=0;HaplotypeScore=81.0989;InbreedingCoeff=1.0000;MQ=88.21;MQ0=0;MQRankSum=-3.098;QD=56.93;ReadPosRankSum=-0.464;VQSLOD=4.7356;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,160,2590	0/0:17,0:17:51.17:0,51,832	0/0:33,0:33:87.27:0,87,1365	0/0:19,0:19:54.15:0,54,780	0/0:14,0:14:42.14:0,42,685	0/0:26,0:26:78.25:0,78,1248	0/0:14,0:14:42.10:0,42,656	1/1:1,23:25:75.24:1439,75,0	0/0:27,0:27:78.27:0,78,1266	0/0:35,0:35:99:0,105,1689	0/0:18,0:18:51.16:0,51,802	0/0:18,0:18:51.17:0,51,829	0/0:26,0:26:75.26:0,75,1224	0/0:28,0:28:84.27:0,84,1339	0/0:23,0:23:69.24:0,69,1126	0/0:26,0:26:78.27:0,78,1271	0/0:28,0:28:84.26:0,84,1323	0/0:19,0:19:57.13:0,57,875	1/1:0,22:22:66.23:1342,66,0	1/1:2,16:19:54.11:994,54,0	1/1:1,36:38:99:2152,108,0	0/0:20,0:20:57.18:0,57,907	0/0:28,0:28:81.26:0,81,1297	0/0:17,0:17:51.17:0,51,832	0/0:27,0:27:81.26:0,81,1298	0/0:31,0:31:93.32:0,93,1517	1/1:0,28:29:81.28:1645,81,0	0/0:15,0:15:45.15:0,45,729
chr10	50812367	.	A	AC	19804.43	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-18.764;DP=827;FS=4.849;HRun=2;HaplotypeScore=75.9889;InbreedingCoeff=0.9997;MQ=80.34;MQ0=1;MQRankSum=-4.656;QD=37.72;ReadPosRankSum=2.545;VQSLOD=5.6441;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,55:56:99:2246,157,0	1/1:0,19:19:54.18:778,54,0	0/0:25,0:24:62.36:0,62,700	0/0:27,0:27:70.43:0,70,802	0/0:28,0:28:81.25:0,81,1004	1/1:1,19:20:54.18:778,54,0	1/1:0,22:22:66.22:950,66,0	1/1:2,30:32:90.25:1235,90,0	1/1:1,28:29:78.26:1123,78,0	0/0:28,0:28:81.25:0,81,994	0/0:32,0:32:93.25:0,93,1112	1/1:0,28:28:84.28:1209,84,0	1/1:1,30:31:81.27:1166,81,0	0/0:38,0:38:99:0,102,1264	1/1:2,43:45:99:1682,117,0	1/1:2,19:20:45.13:628,45,0	0/0:33,0:33:99:0,99,1227	0/0:26,0:25:72.23:0,72,892	1/1:4,27:31:81.26:1143,81,0	1/1:4,28:32:72.24:1036,72,0	1/1:1,37:38:99:1469,102,0	1/1:2,29:31:84.28:1209,84,0	1/1:2,23:25:57.13:820,57,0	1/1:3,22:25:57.19:821,57,0	0/0:30,0:30:87.73:0,88,1068	0/0:27,0:27:78.24:0,78,967	1/1:0,40:40:99:1512,105,0	0/0:8,0:8:24.08:0,24,298
chr10	50813347	.	TACATTGGCAGATGCTGCCTGGGTATTTGGAAGGGTTGAAAGAAC	T	13592	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=10.055;DP=682;FS=2.811;HRun=0;HaplotypeScore=679.4244;InbreedingCoeff=0.9322;MQ=87.88;MQ0=0;MQRankSum=-10.032;QD=72.30;ReadPosRankSum=7.446;VQSLOD=-0.5435;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:17,6:23:3.01:336,3,0	0/0:12,0:12:36.12:0,36,5049	0/0:29,0:29:78.26:0,78,5079	0/0:32,0:32:81.24:0,81,5672	0/0:38,0:38:99:0,108,11828	1/1:4,10:14:12.04:1342,12,0	1/1:15,0:15:6.02:134,6,0	0/0:29,0:29:87.30:0,87,7834	1/1:10,7:17:12.04:1342,12,0	0/0:37,0:37:99:0,99,14746	0/0:26,0:26:72.24:0,72,8457	1/1:11,12:23:18.06:2013,18,0	1/1:13,10:23:18.06:2013,18,0	0/0:20,0:20:57.20:0,57,8017	0/0:44,0:44:99:0,126,19943	1/1:10,9:19:21.07:2349,21,0	0/0:15,0:15:45.15:0,45,7004	0/0:17,0:17:48.15:0,48,6101	0/0:15,0:15:45.14:0,45,4020	0/0:39,0:39:99:0,114,14799	0/0:44,0:44:99:0,126,18834	1/1:13,4:17:12.04:1342,12,0	1/1:10,10:20:18.53:2014,19,0	1/1:12,5:17:9.97:708,10,0	0/0:18,0:18:51.18:0,51,7691	0/0:32,0:32:84.29:0,84,11755	0/0:34,0:33:99:0,99,15776	0/0:13,0:13:39.13:0,39,7075
chr10	50815633	.	TTGTGTGTG	T	2885.11	PASS	AB=1.000;AC=25;AF=0.463;AN=54;BaseQRankSum=8.890;DP=598;FS=2.150;HRun=0;HaplotypeScore=161.7537;InbreedingCoeff=0.7522;MQ=58.16;MQ0=13;MQRankSum=-7.295;QD=10.53;ReadPosRankSum=0.573;VQSLOD=2.8023;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:32,6:39:12.51:226,13,0	1/1:10,0:10:0.47:1,0,0	0/0:20,0:11:0:0,0,0	./.	0/0:16,0:16:24.08:0,24,725	1/1:11,4:15:3.01:47,3,0	1/1:23,2:23:11.82:165,12,0	0/0:33,0:33:33.06:0,33,563	1/1:12,7:17:6.02:150,6,0	0/0:23,0:26:33.07:0,33,861	0/0:16,0:18:15.04:0,15,365	1/1:12,6:19:21.07:480,21,0	1/1:19,10:31:32.85:778,33,0	0/0:13,0:14:27.09:0,27,888	1/1:38,0:37:17.16:470,17,0	1/1:5,6:11:18.06:416,18,0	0/0:21,0:25:45.13:0,45,1585	0/0:23,0:24:17.55:0,18,1333	0/0:20,0:18:15.51:0,16,333	0/1:16,0:21:18.61:19,0,257	0/0:32,0:32:27.08:0,27,650	1/1:10,5:15:3.01:75,3,0	1/1:9,2:11:9.91:178,10,0	1/1:16,2:18:2.75:75,3,0	0/0:16,0:18:21.05:0,21,614	0/0:26,0:26:33.11:0,33,842	0/0:9,0:18:15.03:0,15,346	0/0:6,0:5:12.02:0,12,189
chr10	50815668	.	TGTGTGTGTGTGC	T	1860.82	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=6.697;DP=559;FS=6.246;HRun=0;HaplotypeScore=187.5774;InbreedingCoeff=-0.0154;MQ=51.66;MQ0=28;MQRankSum=-6.955;QD=5.80;ReadPosRankSum=3.349;VQSLOD=2.2689;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:35,0:33:97.05:97,0,352	1/1:4,0:4:8.95:78,9,0	0/0:13,0:10:15.34:0,15,131	0/0:14,0:6:8.09:0,8,91	0/0:18,0:18:44.99:0,45,1312	0/0:13,0:12:19.63:0,20,170	0/1:31,0:28:2.31:127,0,2	0/1:18,0:16:31.64:32,0,423	0/1:21,0:19:6.02:6,0,262	0/0:24,0:23:53.57:0,54,1560	0/0:18,0:18:30.05:0,30,863	0/1:16,0:16:99:103,0,114	0/1:32,0:32:99:222,0,228	0/0:25,0:25:69.01:0,69,1971	1/1:6,31:36:33.02:1009,33,0	0/1:13,0:13:51.49:123,0,51	0/0:32,0:31:78.10:0,78,2899	0/0:31,0:29:61.44:0,61,2328	0/1:12,0:10:12.33:12,0,438	0/1:16,0:15:3.92:4,0,356	0/1:30,0:26:73.47:73,0,740	0/1:9,0:9:18.68:20,0,19	0/1:14,0:14:98.75:99,0,166	1/1:18,0:15:2.72:18,3,0	0/0:16,0:16:42:0,42,1246	0/0:29,0:27:75.01:0,75,1657	0/1:15,0:15:5.39:5,0,402	0/0:5,0:4:12.04:0,12,182
chr10	50815678	.	TGC	T	708.13	PASS	AB=0.989;AC=13;AF=0.232;AN=56;BaseQRankSum=1.674;DP=524;FS=1.120;HRun=0;HaplotypeScore=110.2547;InbreedingCoeff=0.4872;MQ=54.59;MQ0=24;MQRankSum=-3.572;QD=5.02;ReadPosRankSum=0.320;VQSLOD=3.1016;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:32:54.28:0,54,354	1/1:4,0:4:8.89:62,9,0	0/0:14,0:13:11.35:0,11,165	0/0:10,0:6:8.11:0,8,103	0/0:19,0:19:0.59:0,1,278	0/0:14,0:14:22.20:0,22,196	0/0:24,0:22:2.02:0,2,16	1/1:13,0:11:11.91:95,12,0	0/0:20,0:18:32.77:0,33,248	0/0:22,0:21:6.41:0,6,289	0/0:12,0:12:17.92:0,18,164	0/0:19,0:19:25.65:0,26,192	0/0:34,0:34:57.01:0,57,348	0/0:25,0:25:57.51:0,58,576	1/1:37,0:36:29.85:236,30,0	0/0:11,0:11:17.79:0,18,106	0/0:31,0:30:62.59:0,63,752	0/0:31,0:29:34.55:0,35,584	1/1:4,8:11:4.54:127,5,0	0/1:12,0:11:18.40:57,0,18	0/1:27,1:24:27.51:206,0,28	0/0:9,0:9:13.54:0,14,102	0/0:13,0:13:28.37:0,28,187	1/1:19,0:16:0.47:1,0,0	0/0:16,0:16:27.08:0,27,315	0/0:24,0:22:39.94:0,40,388	0/1:16,0:16:10.56:80,0,11	0/0:2,0:2:5.92:0,6,39
chr10	50815685	.	G	GCA	4215.08	PASS	AB=0.545;AC=19;AF=0.339;AN=56;BaseQRankSum=0.933;DP=517;FS=9.158;HRun=0;HaplotypeScore=103.3759;InbreedingCoeff=0.8894;MQ=65.23;MQ0=18;MQRankSum=-3.175;QD=21.62;ReadPosRankSum=0.992;VQSLOD=5.2324;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:31,0:30:60.16:796,60,0	0/0:5,0:5:12.02:0,12,130	0/0:20,0:19:38.74:0,39,550	0/0:15,0:11:26.52:0,27,307	0/0:17,0:17:46.35:0,46,614	1/1:13,0:13:32.94:462,33,0	0/1:4,19:23:7.42:10,0,7	0/0:8,0:6:15:0,15,159	1/1:18,0:18:47.93:586,48,0	0/0:18,0:18:45.11:0,45,615	0/0:10,0:10:23.98:0,24,290	1/1:19,0:19:44.54:451,45,0	1/1:34,0:34:88.05:921,88,0	0/0:24,0:24:68.12:0,68,922	0/0:37,0:36:36:0,36,333	1/1:10,0:10:26.76:280,27,0	0/0:30,0:29:75.21:0,75,1102	0/0:29,0:27:76.11:0,76,1076	0/0:9,0:9:26.97:0,27,290	0/0:9,0:9:15.05:0,15,208	0/0:30,0:26:50.29:0,50,495	1/1:11,0:11:21.01:247,21,0	1/1:14,0:14:35.74:449,36,0	1/1:5,16:19:2.88:15,3,0	0/0:18,0:18:48.02:0,48,626	0/0:23,0:21:60.10:0,60,823	0/0:17,0:17:16.71:0,17,185	0/0:3,0:3:9:0,9,110
chr10	50816341	.	T	TC	7186.56	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-13.786;DP=769;FS=5.207;HRun=7;HaplotypeScore=75.5434;InbreedingCoeff=0.9741;MQ=91.60;MQ0=0;MQRankSum=-2.311;QD=28.41;ReadPosRankSum=1.780;VQSLOD=5.6579;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,30:33:78.24:942,78,0	0/0:11,0:11:27.02:0,27,255	0/0:33,0:33:78.07:0,78,737	0/0:37,0:37:56.99:0,57,633	0/0:22,0:22:57.08:0,57,546	1/1:1,13:14:39.05:453,39,0	1/1:2,22:24:57.17:688,57,0	0/0:36,0:36:87.11:0,87,833	1/1:1,18:19:48.15:580,48,0	0/0:29,0:29:72.09:0,72,689	0/0:14,0:14:33.04:0,33,313	1/1:3,25:28:57.17:688,57,0	1/1:3,33:36:75.02:905,75,0	0/0:41,0:41:99:0,120,1158	0/0:48,0:48:99:0,126,1202	1/1:1,23:24:63.19:761,63,0	0/0:34,0:34:99:0,99,936	0/0:28,0:28:78.09:0,78,740	0/0:23,0:23:54.07:0,54,516	0/0:34,0:34:81.09:0,81,771	0/0:32,0:32:84.13:0,84,811	1/1:4,23:27:69.21:829,69,0	1/1:3,19:22:45.14:544,45,0	1/1:3,23:26:66.20:797,66,0	0/0:21,0:21:63.10:0,63,608	0/0:36,0:36:99:0,102,977	0/0:34,0:33:93.12:0,93,892	0/0:3,0:3:3:0,3,29
chr10	50818067	.	C	CCA	16477.46	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=7.455;DP=631;FS=0.665;HRun=0;HaplotypeScore=91.1865;InbreedingCoeff=0.9912;MQ=74.31;MQ0=0;MQRankSum=-1.121;QD=42.80;ReadPosRankSum=1.862;VQSLOD=6.3770;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,43:47:99:1752,102,0	1/1:2,6:8:24.08:400,24,0	0/0:17,0:16:30.42:0,30,279	0/0:8,0:8:9.01:0,9,100	0/0:30,0:30:78.26:0,78,1037	1/1:3,17:20:42.14:728,42,0	1/1:6,29:35:80.95:1389,81,0	1/1:6,14:20:51.17:878,51,0	1/1:1,13:14:35.89:623,36,0	0/0:27,0:27:72.23:0,72,944	0/0:17,0:17:48.14:0,48,610	1/1:2,18:20:51.17:883,51,0	1/1:2,16:18:51.17:869,51,0	0/0:16,0:16:45.13:0,45,583	1/1:3,20:23:57.20:987,57,0	1/1:2,15:18:42.14:727,42,0	0/0:35,0:35:93.30:0,93,1238	0/0:33,0:33:90.30:0,90,1199	1/1:2,21:23:63.22:1085,63,0	1/1:3,28:31:84.29:1449,84,0	1/1:2,28:30:81.28:1403,81,0	1/1:0,17:17:45.15:779,45,0	1/1:3,15:20:45.11:779,45,0	1/1:2,15:17:42.14:709,42,0	0/0:28,0:28:75.22:0,75,981	0/0:22,0:22:51.17:0,51,679	1/1:4,20:23:60.21:1038,60,0	0/0:13,0:13:33.11:0,33,439
chr10	50821603	.	AT	A	5078.76	PASS	AB=0.684;AC=34;AF=0.607;AN=56;BaseQRankSum=9.324;DP=509;FS=5.876;HRun=12;HaplotypeScore=56.7199;InbreedingCoeff=0.6963;MQ=74.40;MQ0=0;MQRankSum=-0.296;QD=14.89;ReadPosRankSum=-0.397;VQSLOD=5.3039;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:6,26:33:2.61:521,0,3	1/1:1,0:7:10.18:29,10,0	0/1:22,3:22:16.16:16,0,231	0/0:9,0:7:13.40:0,13,138	0/0:20,1:21:33.88:0,34,524	1/1:1,17:18:44.81:348,45,0	1/1:4,10:15:31.89:238,32,0	1/1:5,27:32:25.76:563,26,0	1/1:2,13:15:35.84:279,36,0	0/0:22,1:24:39.72:0,40,566	0/0:5,0:6:5.17:0,5,86	1/1:0,11:11:32.87:255,33,0	1/1:3,15:18:44.82:348,45,0	1/1:0,23:25:66.83:499,67,0	1/1:2,0:17:26.47:76,26,0	1/1:1,13:15:37.90:284,38,0	0/0:30,0:30:75.14:0,75,755	0/0:25,0:25:60.12:0,60,609	0/1:12,10:23:20.04:217,0,20	1/1:0,14:14:35.82:279,36,0	1/1:2,7:9:14.94:116,15,0	0/1:3,5:8:12.51:98,0,13	1/1:1,11:12:23.90:186,24,0	1/1:2,20:23:58.79:447,59,0	0/0:13,0:15:38.91:0,39,375	0/0:18,1:19:18.85:0,19,373	1/1:7,13:21:13.42:277,13,0	0/0:19,0:19:48.04:0,48,471
chr10	50821969	.	AGGCT	A	13359.36	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=14.223;DP=701;FS=1.699;HRun=0;HaplotypeScore=129.5322;InbreedingCoeff=0.9913;MQ=86.21;MQ0=1;MQRankSum=-4.287;QD=43.66;ReadPosRankSum=7.884;VQSLOD=5.1460;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,59:62:99:2829,151,0	1/1:0,5:5:9.03:171,9,0	0/0:22,0:22:60.21:0,60,1482	0/0:28,0:28:54.64:0,55,1272	0/0:18,0:18:48.15:0,48,1131	1/1:0,10:10:24.08:456,24,0	1/1:2,23:25:63.22:1196,63,0	0/0:20,0:20:54.18:0,54,1354	1/1:0,29:28:63.22:1195,63,0	0/0:21,0:21:60.21:0,60,1597	0/0:18,0:18:51.18:0,51,1300	1/1:3,21:24:57.20:1078,57,0	1/1:0,23:23:63.22:1195,63,0	0/0:26,0:26:78.27:0,78,2016	1/1:2,30:32:75.26:1424,75,0	1/1:4,28:32:63.22:1196,63,0	0/0:28,0:28:81.26:0,81,2086	0/0:47,0:47:99:0,141,3780	0/0:27,0:27:66.23:0,66,1715	0/0:12,0:12:30.10:0,30,794	0/0:44,0:44:99:0,126,3240	1/1:1,11:12:27.09:512,27,0	1/1:1,12:13:30.10:569,30,0	1/1:2,37:39:81.75:1538,82,0	0/0:18,0:18:39.12:0,39,998	0/0:26,0:26:75.26:0,75,1946	0/0:25,0:24:72.23:0,72,1854	0/0:15,0:15:42.14:0,42,1118
chr10	50822221	.	ATT	A	8147.43	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=8.494;DP=567;FS=18.315;HRun=10;HaplotypeScore=75.5314;InbreedingCoeff=0.9791;MQ=74.68;MQ0=1;MQRankSum=-0.121;QD=24.18;ReadPosRankSum=2.073;VQSLOD=2.8013;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,14:20:8.88:399,9,0	1/1:1,7:8:18.05:201,18,0	0/0:18,0:14:17.46:0,17,185	0/0:13,0:12:8.97:0,9,173	0/0:27,0:27:75.23:0,75,1127	1/1:4,16:20:38.27:491,38,0	1/1:7,21:28:57.10:623,57,0	1/1:3,30:33:72.40:982,72,0	1/1:2,20:22:57.15:635,57,0	0/0:20,0:23:60.20:0,60,927	0/0:25,0:26:77.73:0,78,1152	1/1:2,14:16:30.07:334,30,0	1/1:1,18:19:39.10:435,39,0	0/0:17,0:18:50.74:0,51,728	1/1:3,22:24:57.15:635,57,0	1/1:2,13:15:33.09:368,33,0	0/0:27,0:27:63.21:0,63,1000	0/0:13,0:15:41.59:0,42,601	1/1:2,20:22:60.05:611,60,0	1/1:6,14:20:45.08:498,45,0	1/1:2,8:10:18.04:201,18,0	1/1:6,17:23:40.72:465,41,0	1/1:5,12:17:30.05:334,30,0	1/1:3,11:14:30.07:334,30,0	0/0:20,0:23:53.65:0,54,762	0/0:18,0:18:51.17:0,51,787	1/1:4,21:25:54.13:602,54,0	0/0:21,0:21:57.19:0,57,900
chr10	50823871	.	T	TTC	6425.68	PASS	AB=0.761;AC=32;AF=0.571;AN=56;BaseQRankSum=3.561;DP=509;FS=16.910;HRun=0;HaplotypeScore=105.9642;InbreedingCoeff=0.3788;MQ=53.55;MQ0=8;MQRankSum=-3.591;QD=20.46;ReadPosRankSum=-2.333;VQSLOD=3.2624;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,7:11:12.04:190,12,0	1/1:3,2:5:4.64:80,5,0	0/0:29,0:13:5.58:0,6,75	0/0:39,0:18:14.03:0,14,121	0/1:33,0:33:25.62:26,0,826	0/1:6,12:19:13.31:334,0,13	1/1:1,10:10:18.06:297,18,0	1/1:7,17:22:19.66:771,20,0	1/1:1,11:12:30.10:494,30,0	0/0:20,0:20:57.18:0,57,711	0/1:27,0:27:57.03:57,0,672	0/1:6,9:15:13.80:340,0,14	1/1:5,14:21:39.01:532,39,0	0/0:14,0:14:4.25:0,4,366	1/1:6,9:14:30.06:405,30,0	0/1:5,8:13:7.84:347,0,8	0/0:25,0:25:39.28:0,39,691	0/1:9,0:9:14.24:14,0,184	1/1:3,7:9:21.07:334,21,0	1/1:4,14:18:20.99:642,21,0	1/1:3,2:5:6.02:99,6,0	0/1:2,10:13:2.33:432,0,2	1/1:6,15:22:33.11:543,33,0	1/1:2,8:10:15.05:249,15,0	0/0:24,0:24:30.14:0,30,608	0/0:29,0:28:29.29:0,29,774	0/1:12,8:18:18.20:243,0,18	0/0:13,0:14:35.65:0,36,365
chr10	50823873	.	C	CTT	4052.23	PASS	AB=0.962;AC=28;AF=0.500;AN=56;BaseQRankSum=11.751;DP=510;FS=10.132;HRun=2;HaplotypeScore=121.4549;InbreedingCoeff=-0.1023;MQ=52.73;MQ0=9;MQRankSum=-4.033;QD=11.54;ReadPosRankSum=1.568;VQSLOD=-0.0725;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:11,0:11:29.92:79,0,30	0/1:4,1:5:29.64:71,0,30	0/0:30,0:13:18.67:0,19,225	0/0:41,0:17:27.40:0,27,293	0/1:30,3:33:99:139,0,1029	0/1:20,0:19:53.16:174,0,53	0/1:11,0:10:4.94:146,0,5	0/1:26,0:24:8.46:380,0,8	1/1:12,0:12:30.05:300,30,0	0/0:20,0:20:60.20:0,60,897	0/1:22,4:26:99:145,0,832	0/1:14,1:15:45.53:214,0,46	1/1:21,1:22:17.23:387,17,0	0/1:14,1:15:63.11:63,0,445	1/1:12,3:14:8.11:314,8,0	0/1:12,0:12:32.58:219,0,33	0/0:26,0:26:67.95:0,68,955	0/1:8,1:9:30.25:30,0,278	0/1:9,0:8:4.04:139,0,4	1/1:18,0:18:18.25:387,18,0	0/1:4,0:4:37.90:43,0,38	0/1:13,0:13:35.63:241,0,36	1/1:22,0:22:6.35:297,6,0	1/1:10,0:10:15.01:142,15,0	0/1:23,0:23:3.35:3,0,745	0/0:26,1:27:30.85:0,31,980	0/1:20,0:18:99:141,0,119	0/0:13,0:14:35.72:0,36,483
chr10	50823905	.	T	TCC	95.12	PASS	AB=0.750;AC=2;AF=0.037;AN=54;BaseQRankSum=5.262;DP=423;FS=8.843;HRun=0;HaplotypeScore=128.8607;InbreedingCoeff=-0.0581;MQ=36.06;MQ0=7;MQRankSum=-3.470;QD=7.93;ReadPosRankSum=3.502;VQSLOD=2.6915;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:6:14.92:0,15,209	0/1:1,1:2:41.76:54,0,42	0/0:11,0:4:12.04:0,12,196	./.	0/0:35,0:35:94.94:0,95,1446	0/0:16,0:15:42.14:0,42,671	0/0:8,0:7:17.93:0,18,260	0/0:29,0:24:65.76:0,66,843	0/0:10,0:10:27.02:0,27,374	0/0:29,0:29:82.35:0,82,1190	0/0:30,0:30:65.41:0,65,1052	0/0:11,1:12:1.13:0,1,487	0/0:16,1:17:6.16:0,6,531	0/0:14,0:14:42.14:0,42,663	0/1:8,2:9:99:129,0,214	0/0:11,0:11:30.10:0,30,480	0/0:20,0:20:51.09:0,51,775	0/0:8,0:8:21.07:0,21,335	0/0:18,0:15:41.99:0,42,596	0/0:15,0:15:44.98:0,45,674	0/0:2,0:2:6.02:0,6,98	0/0:14,0:14:42.13:0,42,637	0/0:21,0:21:54.62:0,55,847	0/0:8,0:8:18.06:0,18,285	0/0:17,0:17:22.44:0,22,757	0/0:21,0:21:63.22:0,63,1021	0/0:14,0:14:42.14:0,42,640	0/0:10,0:10:30.04:0,30,411
chr10	50823912	.	T	TTGGG	1134.93	PASS	AB=0.923;AC=11;AF=0.204;AN=54;BaseQRankSum=-1.210;DP=378;FS=26.002;HRun=0;HaplotypeScore=129.3216;InbreedingCoeff=-0.2771;MQ=34.81;MQ0=4;MQRankSum=-3.371;QD=7.05;ReadPosRankSum=0.292;VQSLOD=0.9210;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:3,2:5:99:118,0,173	0/0:2,0:2:3:0,3,26	0/0:10,0:4:11.83:0,12,186	./.	0/0:27,1:28:24.92:0,25,1105	0/0:15,0:14:42.12:0,42,712	0/1:8,0:7:50.03:50,0,215	0/0:22,0:21:57.13:0,57,910	0/1:9,0:9:99:112,0,329	0/1:21,2:26:99:278,0,927	0/1:27,1:28:68.81:69,0,1013	0/0:12,0:12:36.06:0,36,583	0/0:16,0:16:47.93:0,48,660	0/0:13,0:13:39.12:0,39,635	0/0:11,0:10:5.47:0,5,298	0/0:10,0:10:24.08:0,24,456	0/0:16,0:16:42.02:0,42,778	0/0:8,0:8:18.01:0,18,274	0/0:11,0:10:26.73:0,27,416	0/1:11,2:13:99:161,0,499	0/0:2,0:2:6.02:0,6,126	0/1:12,1:13:90.37:90,0,525	0/1:18,2:20:99:182,0,795	0/0:7,0:7:15.05:0,15,304	0/1:16,0:16:7.63:8,0,753	0/0:19,0:19:57.17:0,57,1011	0/1:13,1:14:81.69:82,0,521	0/1:9,0:9:99:129,0,276
chr10	50824986	.	T	TAC	259.25	PASS	AB=0.957;AC=22;AF=0.478;AN=46;BaseQRankSum=5.689;DP=597;FS=2.395;HRun=0;HaplotypeScore=211.8974;InbreedingCoeff=-0.0990;MQ=28.04;MQ0=27;MQRankSum=-4.331;QD=0.65;ReadPosRankSum=-3.737;VQSLOD=2.1518;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:9,0:8:0.87:2,1,0	0/1:17,2:16:21.74:22,0,66	./.	./.	0/0:30,0:23:5.95:0,6,78	1/1:12,1:10:2.59:27,3,0	./.	0/0:33,0:11:12.67:0,13,253	./.	0/1:66,1:53:57.90:58,0,721	0/1:23,1:21:10.30:10,0,156	1/1:15,0:13:0.47:1,0,0	0/1:21,1:20:16.17:16,0,50	0/1:29,0:25:28.85:29,0,70	0/1:24,2:25:12.56:13,0,121	1/1:17,2:14:8.50:65,9,0	0/0:19,1:19:15.60:0,16,166	0/0:3,0:2:3.01:0,3,32	0/0:11,0:5:3.48:0,3,41	1/1:30,0:26:6.07:23,6,0	./.	1/1:28,1:22:9.99:52,10,0	0/0:21,0:19:1.27:0,1,11	0/1:13,2:15:16.50:16,0,66	0/0:40,1:29:3.18:0,3,41	0/1:36,1:26:37.48:37,0,415	0/1:18,0:15:21.99:22,0,144	0/1:23,0:23:1.92:2,0,277
chr10	50824992	.	C	CAT	243.69	PASS	AB=0.960;AC=21;AF=0.420;AN=50;BaseQRankSum=7.515;DP=689;FS=21.445;HRun=0;HaplotypeScore=225.3154;InbreedingCoeff=-0.0482;MQ=28.50;MQ0=39;MQRankSum=-4.584;QD=0.52;ReadPosRankSum=-3.795;VQSLOD=0.8176;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:10:1.96:0,2,6	0/1:18,1:16:24.52:25,0,76	./.	./.	0/0:36,2:31:23.90:0,24,228	1/1:17,0:13:3.21:14,3,0	0/0:11,1:11:0:0,0,0	0/1:43,0:17:15.92:16,0,282	0/0:17,0:11:0:0,0,0	0/1:77,1:58:86.74:87,0,942	0/0:28,0:25:7.62:0,8,219	1/1:17,1:16:0.47:1,0,0	0/1:24,0:22:0.07:0,0,56	0/1:25,5:26:4:4,0,124	0/1:23,5:27:7.78:8,0,153	1/1:17,2:14:4.25:21,4,0	0/0:21,0:19:23.62:0,24,242	0/0:6,0:5:5.92:0,6,41	0/1:16,0:7:9.53:10,0,55	1/1:33,1:30:5.76:21,6,0	./.	1/1:32,0:24:11.19:40,11,0	0/0:25,0:23:1.60:0,2,12	0/1:17,0:17:1.68:2,0,77	0/0:42,1:31:3.06:0,3,42	0/1:48,2:33:31.35:31,0,583	0/1:20,1:18:69.84:70,0,137	0/1:23,0:23:28.96:29,0,362
chr10	50824994	.	T	TAC	789.24	PASS	AB=0.980;AC=25;AF=0.521;AN=48;BaseQRankSum=7.878;DP=712;FS=27.540;HRun=0;HaplotypeScore=228.8619;InbreedingCoeff=-0.0206;MQ=28.39;MQ0=45;MQRankSum=-5.053;QD=1.48;ReadPosRankSum=-2.098;VQSLOD=1.1848;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:12,0:11:2.22:2,0,2	0/1:19,0:16:13.69:14,0,71	./.	./.	0/0:37,1:31:24.01:0,24,315	1/1:17,0:13:5.48:36,5,0	0/1:13,0:11:0.03:0,0,0	0/0:48,0:18:31.64:0,32,330	./.	0/1:73,8:59:99:270,0,863	0/0:28,0:25:11.37:0,11,244	1/1:18,0:16:0.47:1,0,0	0/1:24,0:22:11.01:11,0,33	0/1:28,2:26:18.90:19,0,165	0/1:29,0:27:3.28:3,0,145	1/1:21,0:16:5.61:39,6,0	0/0:22,0:20:22.69:0,23,272	0/0:6,0:5:6.02:0,6,74	0/1:18,0:9:27.50:27,0,47	1/1:37,0:33:15.22:92,15,0	./.	1/1:34,0:26:18.84:99,19,0	1/1:25,0:23:5.61:26,6,0	0/1:17,0:17:6.87:7,0,71	0/1:38,5:31:4.45:4,0,48	0/1:51,0:34:58.70:59,0,612	0/1:22,0:19:99:111,0,101	0/1:23,0:23:99:115,0,320
chr10	50824997	.	A	ACG	54.12	PASS	AB=0.989;AC=13;AF=0.260;AN=50;BaseQRankSum=6.641;DP=733;FS=13.263;HRun=0;HaplotypeScore=236.8970;InbreedingCoeff=0.1592;MQ=28.56;MQ0=46;MQRankSum=-3.497;QD=0.16;ReadPosRankSum=-0.556;VQSLOD=1.3003;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:12:3.47:0,3,10	0/0:19,0:16:16.31:0,16,133	./.	./.	0/0:36,1:30:24.08:0,24,368	1/1:17,1:14:1:3,1,0	0/0:15,0:13:0:0,0,1	0/0:54,0:21:53.76:0,54,610	0/0:17,0:11:0:0,0,0	0/1:81,1:59:52.37:52,0,1183	0/0:27,1:25:11.81:0,12,310	0/1:19,0:17:0.05:0,0,0	0/0:24,0:22:7.89:0,8,41	0/0:32,0:28:10.11:0,10,265	0/0:29,0:27:12.46:0,12,185	0/1:20,1:16:0.92:1,0,3	0/0:22,0:20:22.53:0,23,328	0/0:7,0:6:6.02:0,6,91	0/1:18,0:9:4.55:5,0,95	1/1:32,6:34:1.76:12,2,0	./.	1/1:32,2:26:4.19:21,4,0	0/0:24,0:22:3.58:0,4,18	0/0:16,0:17:5.06:0,5,90	0/0:44,0:32:10.07:0,10,105	0/1:52,1:35:27.04:27,0,852	0/1:24,0:20:27.79:28,0,163	0/1:24,0:23:24.81:25,0,403
chr10	50825008	.	C	CAT	311.70	PASS	AB=0.981;AC=22;AF=0.423;AN=52;BaseQRankSum=8.439;DP=826;FS=26.501;HRun=0;HaplotypeScore=250.8145;InbreedingCoeff=-0.0145;MQ=29.16;MQ0=68;MQRankSum=-5.754;QD=0.58;ReadPosRankSum=-0.828;VQSLOD=1.0469;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:1.02:0,1,3	0/1:19,0:16:52.17:52,0,94	./.	./.	0/0:39,0:32:32.86:0,33,460	1/1:19,0:15:1.49:6,1,0	0/0:23,0:19:2.37:0,2,9	0/1:68,3:26:40.76:41,0,400	1/1:18,0:12:2.89:25,3,0	0/1:91,0:66:44.48:44,0,1047	0/0:30,0:27:6.52:0,7,355	1/1:20,0:18:0.47:1,0,0	0/1:27,0:25:0.50:1,0,9	0/0:33,0:29:6.29:0,6,326	0/0:32,0:30:6.73:0,7,168	1/1:24,0:19:3.92:14,4,0	0/0:23,0:20:29.38:0,29,389	0/0:10,0:9:9.88:0,10,115	0/1:20,1:12:20.20:20,0,80	0/1:40,3:38:30.10:52,0,30	0/0:20,0:8:3.01:0,3,33	1/1:37,0:29:12.28:67,12,0	0/1:25,0:22:9.96:18,0,10	1/1:18,0:17:4.63:14,5,0	0/1:44,0:32:39.93:40,0,108	0/0:61,0:38:9.02:0,9,989	0/1:24,1:21:33.93:34,0,60	0/1:32,0:30:28.60:29,0,503
chr10	50825012	.	TAC	T	1227.53	PASS	AB=0.969;AC=29;AF=0.558;AN=52;BaseQRankSum=9.260;DP=850;FS=52.335;HRun=0;HaplotypeScore=244.9353;InbreedingCoeff=0.0239;MQ=29.97;MQ0=70;MQRankSum=-6.193;QD=1.79;ReadPosRankSum=-0.294;VQSLOD=1.2019;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:17,0:16:15.51:18,0,16	1/1:12,6:15:9.90:125,10,0	./.	./.	0/0:41,0:34:36.12:0,36,607	1/1:21,2:19:5.53:27,6,0	0/0:22,1:19:2.98:0,3,22	0/1:69,3:27:99:339,0,113	1/1:18,0:12:0.89:2,1,0	0/1:91,2:67:63.58:64,0,1000	0/0:28,0:25:16.41:0,16,452	1/1:21,0:19:3.44:21,3,0	1/1:25,2:25:0.23:19,0,0	0/0:33,0:29:20.89:0,21,421	1/1:18,14:30:14.91:175,15,0	1/1:24,0:19:8.75:52,9,0	0/0:24,0:21:28.42:0,28,467	0/0:10,1:10:15.93:0,16,228	0/1:22,1:12:11.98:116,0,12	0/1:38,5:38:31.84:71,0,32	0/1:24,0:12:13.89:14,0,46	1/1:31,6:29:21.75:112,22,0	1/1:20,6:23:8.34:41,8,0	0/1:17,2:18:22.16:22,0,36	0/1:42,2:32:29.08:29,0,138	0/1:62,0:38:29.90:30,0,1047	0/1:25,0:21:3.24:83,0,3	0/1:36,0:34:33.83:34,0,685
chr10	50825014	.	C	CAT	669.53	PASS	AB=0.971;AC=21;AF=0.404;AN=52;BaseQRankSum=5.375;DP=864;FS=31.464;HRun=0;HaplotypeScore=256.9075;InbreedingCoeff=0.1065;MQ=30.25;MQ0=71;MQRankSum=-4.824;QD=1.49;ReadPosRankSum=-1.471;VQSLOD=1.3278;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:17,0:16:14.65:15,0,19	0/1:18,0:15:9.11:9,0,23	./.	./.	0/0:41,0:34:36.05:0,36,550	1/1:22,0:18:1.67:6,2,0	0/1:24,0:20:0:0,0,0	0/1:72,0:27:99:248,0,174	1/1:17,1:12:4.46:38,4,0	0/0:95,0:68:10.93:0,11,1086	0/0:30,0:26:16.26:0,16,401	1/1:22,0:20:3.43:21,3,0	0/1:28,0:26:4.47:11,0,4	0/0:33,0:29:9.24:0,9,365	0/0:33,0:31:6.41:0,6,49	1/1:24,0:19:7.57:36,8,0	0/0:24,0:21:13.04:0,13,401	0/0:11,0:10:12.93:0,13,181	0/1:22,2:12:19.10:159,0,19	0/1:41,4:40:13:13,0,43	0/1:25,0:13:13.89:14,0,39	1/1:37,0:29:6.77:46,7,0	0/1:28,0:25:10.08:29,0,10	0/1:18,1:18:17.54:18,0,21	0/0:44,0:32:9.97:0,10,144	0/0:63,0:39:74.84:0,75,1176	0/1:22,3:21:1.70:162,0,2	0/0:36,0:34:27.46:0,27,679
chr10	50825016	.	CACACAT	C	4116.89	PASS	AB=0.940;AC=27;AF=0.519;AN=52;BaseQRankSum=10.895;DP=883;FS=74.871;HRun=0;HaplotypeScore=259.7303;InbreedingCoeff=-0.3105;MQ=30.42;MQ0=76;MQRankSum=-9.690;QD=5.48;ReadPosRankSum=0.831;VQSLOD=-0.5402;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:16,1:16:2.17:5,0,2	0/1:16,1:15:53.95:148,0,54	./.	./.	0/0:34,7:34:36.11:0,36,1132	1/1:24,0:20:5.82:93,6,0	0/0:23,1:20:2.34:0,2,11	0/1:73,2:27:99:383,0,133	1/1:17,0:12:2.22:7,2,0	0/1:84,12:69:99:708,0,1896	0/1:28,2:26:85.15:85,0,878	0/0:22,0:20:1.47:0,1,4	1/1:28,0:26:11.34:152,11,0	0/1:33,0:29:35.17:35,0,769	0/1:32,1:31:28.95:29,0,129	1/1:24,0:19:4.09:90,4,0	0/1:25,1:23:24.83:25,0,889	0/0:11,0:10:0.24:0,0,370	0/1:26,0:12:23.28:33,0,23	0/1:38,4:40:54.84:455,0,55	0/0:29,0:16:4.56:0,5,77	1/1:29,6:29:24.52:488,25,0	1/1:22,7:26:9.20:280,9,0	0/1:18,0:18:34.90:35,0,94	0/1:35,11:34:99:228,0,293	0/1:59,5:39:99:368,0,2169	0/1:25,1:22:77.67:97,0,78	0/1:28,6:34:99:370,0,1466
chr10	50825018	.	C	CAT	3169.30	PASS	AB=0.861;AC=25;AF=0.481;AN=52;BaseQRankSum=12.081;DP=884;FS=84.667;HRun=0;HaplotypeScore=255.1716;InbreedingCoeff=-0.3905;MQ=30.74;MQ0=76;MQRankSum=-9.612;QD=4.23;ReadPosRankSum=2.157;VQSLOD=-0.2584;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:4.61:0,5,47	1/1:12,6:15:9.27:143,9,0	./.	./.	0/0:31,4:34:36.02:0,36,550	1/1:22,1:21:8.60:119,9,0	0/0:23,0:20:0.88:0,1,2	0/1:64,9:28:99:627,0,129	0/0:15,0:12:2.96:0,3,19	0/1:76,14:68:99:595,0,899	0/1:24,5:27:21.72:22,0,380	0/1:17,1:20:21.02:40,0,21	0/1:20,2:26:23.58:109,0,24	0/1:28,4:29:24.56:25,0,355	1/1:24,8:31:7.55:53,8,0	0/1:16,4:19:14.36:119,0,14	0/1:22,2:23:19.21:19,0,422	0/1:11,0:10:1:1,0,198	0/1:22,1:12:23.71:79,0,24	0/1:38,5:40:60:243,0,60	0/0:29,0:16:12:0,12,120	1/1:29,6:29:5.04:250,5,0	0/1:26,4:28:31.97:107,0,32	0/1:18,1:18:29.51:30,0,47	0/1:36,7:34:99:144,0,107	0/1:61,1:39:99:133,0,959	0/1:12,12:22:16.92:229,0,17	0/1:32,2:35:99:233,0,622
chr10	50825020	.	CAT	C	1441.41	PASS	AB=0.932;AC=32;AF=0.615;AN=52;BaseQRankSum=9.067;DP=881;FS=42.515;HRun=0;HaplotypeScore=250.4224;InbreedingCoeff=0.1171;MQ=31.15;MQ0=74;MQRankSum=-5.231;QD=1.97;ReadPosRankSum=-3.366;VQSLOD=1.1999;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:15,4:18:7.53:73,8,0	0/1:18,0:15:4.56:56,0,5	./.	./.	0/0:41,0:34:36.59:0,37,694	1/1:8,17:21:3.92:12,4,0	0/1:17,8:21:14.49:19,0,14	0/1:64,8:26:99:286,0,116	1/1:10,8:12:5.92:39,6,0	0/1:93,0:66:18.99:19,0,1282	0/0:31,0:27:19.33:0,19,532	1/1:11,10:19:3.48:46,3,0	1/1:18,9:25:4.09:58,4,0	0/0:35,0:31:25.61:0,26,534	1/1:33,0:31:14.18:71,14,0	1/1:14,10:19:10.12:83,10,0	0/0:26,0:23:34.72:0,35,556	0/0:11,0:10:17.96:0,18,270	1/1:16,4:9:16.46:159,16,0	0/1:41,5:41:25.07:129,0,25	0/1:29,1:17:42.44:101,0,42	1/1:25,12:29:13.68:102,14,0	1/1:29,1:27:16.05:147,16,0	0/1:14,5:18:41.32:41,0,82	0/1:46,0:34:42.13:42,0,151	0/1:65,0:39:21.54:22,0,1243	1/1:25,2:23:17.02:98,17,0	0/1:37,0:35:12.70:13,0,903
chr10	50825022	.	TAC	T	573.39	PASS	AB=0.968;AC=23;AF=0.442;AN=52;BaseQRankSum=9.853;DP=889;FS=43.767;HRun=0;HaplotypeScore=254.5243;InbreedingCoeff=-0.0485;MQ=31.37;MQ0=74;MQRankSum=-5.934;QD=1.04;ReadPosRankSum=-2.165;VQSLOD=1.2463;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:19,0:18:15.79:18,0,16	0/1:16,1:15:8.73:46,0,9	./.	./.	0/0:41,0:34:36.12:0,36,695	1/1:24,2:22:5.79:38,6,0	0/0:23,0:21:2.94:0,3,21	0/1:72,0:28:92.65:93,0,137	1/1:19,0:12:3.38:12,3,0	0/0:91,2:66:10.08:0,10,1552	0/0:30,0:27:22.95:0,23,560	1/1:22,0:20:3.44:21,3,0	0/1:26,2:26:11.39:13,0,11	0/0:35,0:31:28.30:0,28,603	0/1:33,0:31:7.06:7,0,24	1/1:24,0:19:8.92:62,9,0	0/0:26,0:23:38.31:0,38,612	0/0:11,0:11:21.05:0,21,322	0/1:19,0:9:3.83:56,0,4	0/1:38,5:40:35.58:100,0,36	0/1:30,0:17:13.91:14,0,49	1/1:32,5:29:23.80:129,24,0	0/1:27,5:29:43.10:57,0,43	0/1:19,0:18:26.24:26,0,102	0/1:43,3:35:6.25:6,0,159	0/0:66,0:40:18.48:0,18,1341	0/1:26,0:23:12.46:12,0,38	0/1:37,0:35:25.49:25,0,987
chr10	50825034	.	TAC	T	340.76	PASS	AB=0.970;AC=14;AF=0.250;AN=56;BaseQRankSum=10.303;DP=927;FS=45.244;HRun=0;HaplotypeScore=245.7108;InbreedingCoeff=-0.1350;MQ=33.36;MQ0=64;MQRankSum=-7.550;QD=0.84;ReadPosRankSum=-2.800;VQSLOD=1.0648;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:17:7.32:0,7,153	0/1:17,1:15:13.32:13,0,18	0/0:3,1:3:5.99:0,6,52	0/0:8,0:2:6.01:0,6,77	0/0:43,1:37:45.15:0,45,759	1/1:27,0:23:5.83:43,6,0	0/0:26,0:22:9.03:0,9,137	0/0:65,0:26:7.66:0,8,438	0/0:17,0:10:6.02:0,6,98	0/0:95,2:68:10.17:0,10,1769	0/0:34,0:30:41.89:0,42,682	0/0:25,0:23:11.50:0,12,179	0/1:30,0:28:7.47:7,0,269	0/0:38,0:34:35.47:0,35,710	0/1:36,0:34:1.25:57,0,1	0/1:26,0:21:27.52:28,0,176	0/0:29,0:26:40.26:0,40,676	0/0:14,0:14:33.11:0,33,532	0/1:23,0:11:16.16:16,0,209	0/1:40,2:38:57.46:57,0,323	0/0:32,0:21:15.03:0,15,232	0/1:36,0:28:67.51:68,0,174	0/1:33,0:30:23.51:24,0,331	0/1:20,0:19:4.16:4,0,193	0/1:44,4:36:67.86:68,0,179	0/0:70,0:45:78.19:0,78,1570	0/1:23,7:26:94.46:94,0,175	0/1:36,0:34:11.61:12,0,977
chr10	50825112	.	CAGAG	C	2546.55	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=8.236;DP=762;FS=4.430;HRun=0;HaplotypeScore=199.4330;InbreedingCoeff=0.9877;MQ=51.01;MQ0=4;MQRankSum=-7.058;QD=21.95;ReadPosRankSum=-2.301;VQSLOD=3.1002;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:24.05:0,24,548	0/0:10,0:10:30.10:0,30,774	0/0:37,0:24:57.13:0,57,1267	0/0:63,0:38:66.55:0,67,1624	0/0:25,0:25:38.92:0,39,948	0/0:32,0:30:36.10:0,36,950	0/0:22,0:20:30.10:0,30,789	1/1:4,24:28:63.20:1052,63,0	0/0:26,0:21:42.09:0,42,961	0/0:32,0:31:87.29:0,87,2205	0/0:23,0:23:38.79:0,39,906	0/0:23,0:23:45.04:0,45,1138	0/0:29,0:29:57.20:0,57,1459	0/0:24,0:21:42.14:0,42,1002	0/0:37,0:36:69.22:0,69,1674	0/0:23,0:22:36.12:0,36,860	0/0:34,0:33:61.42:0,61,1928	0/0:28,0:28:81.28:0,81,1974	1/1:0,12:11:33.11:576,33,0	1/1:9,16:25:12:183,12,0	1/1:19,6:25:14.66:266,15,0	0/0:26,0:26:36.12:0,36,918	0/0:23,0:23:38.91:0,39,825	0/0:28,0:28:38.16:0,38,891	0/0:26,0:26:51.18:0,51,1332	0/0:33,0:29:72.25:0,72,1770	1/1:2,24:26:36.12:642,36,0	0/0:23,0:23:69.24:0,69,1638
chr10	50829889	.	CATCGCCAGCACAAGTCTGGCG	C	10296.52	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=13.431;DP=659;FS=2.784;HRun=0;HaplotypeScore=360.9497;InbreedingCoeff=0.9792;MQ=67.87;MQ0=0;MQRankSum=-7.466;QD=98.06;ReadPosRankSum=1.083;VQSLOD=3.6758;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,126,11646	0/0:13,0:13:33.11:0,33,2690	0/0:13,0:14:33.07:0,33,1146	0/0:4,0:4:9.03:0,9,459	0/0:39,0:39:99:0,108,9805	0/0:16,0:16:48.16:0,48,4187	0/0:22,0:22:63.22:0,63,5315	1/1:9,16:25:48.13:1754,48,0	0/0:14,0:14:42.14:0,42,3788	0/0:20,0:20:54.18:0,54,4402	0/0:27,0:27:78.25:0,78,7140	0/0:32,0:32:93.30:0,93,7507	0/0:22,0:22:66.21:0,66,6058	0/0:25,0:25:72.25:0,72,6552	0/0:28,0:28:81.28:0,81,7402	0/0:27,0:27:81.28:0,81,7516	0/0:32,0:32:96.33:0,96,8917	0/0:14,0:14:42.14:0,42,3971	1/1:7,14:21:42.12:2043,42,0	1/1:6,21:27:57.15:2785,57,0	1/1:4,5:9:12.04:707,12,0	0/0:33,0:33:93.29:0,93,8023	0/0:35,0:35:99:0,105,9208	0/0:25,0:25:75.26:0,75,7395	0/0:24,0:24:72.25:0,72,6625	0/0:33,0:33:99:0,99,9414	1/1:3,20:23:51.18:3007,51,0	0/0:13,0:13:39.13:0,39,3472
chr10	50831323	.	ATG	A	1767.95	PASS	AB=0.989;AC=26;AF=0.500;AN=52;BaseQRankSum=6.783;DP=329;FS=0.000;HRun=0;HaplotypeScore=58.4237;InbreedingCoeff=0.5901;MQ=56.71;MQ0=8;MQRankSum=-0.865;QD=10.10;ReadPosRankSum=-0.042;VQSLOD=3.1248;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,3:12:20.85:185,21,0	0/0:2,0:2:5.98:0,6,46	0/0:15,0:2:5.83:0,6,37	0/1:20,0:5:0.02:1,0,0	0/0:19,0:19:21.81:0,22,623	0/1:22,0:22:60.83:106,0,61	1/1:2,0:2:2.99:24,3,0	1/1:33,0:30:3.46:388,3,0	0/1:11,0:11:9.75:89,0,10	0/0:13,0:13:39.10:0,39,564	0/0:17,0:17:27.36:0,27,559	1/1:11,1:12:32.72:277,33,0	1/1:12,3:15:44.71:377,45,0	0/0:12,0:12:35.31:0,35,536	0/0:5,0:5:12.43:0,12,93	1/1:9,0:9:23.93:204,24,0	0/1:14,0:14:8.29:8,0,364	0/0:16,0:16:18.46:0,18,624	1/1:12,0:5:9.01:81,9,0	1/1:2,0:2:2.86:25,3,0	./.	./.	1/1:2,1:3:5.97:46,6,0	1/1:2,2:4:11.95:122,12,0	0/0:20,0:20:60.13:0,60,904	0/0:23,0:22:31.75:0,32,782	1/1:3,0:3:2.97:20,3,0	0/0:12,0:12:23.72:0,24,419
chr10	50831329	.	GTA	G	117.41	PASS	AB=0.946;AC=12;AF=0.240;AN=50;BaseQRankSum=3.826;DP=335;FS=0.853;HRun=0;HaplotypeScore=64.4249;InbreedingCoeff=-0.0175;MQ=58.29;MQ0=7;MQRankSum=1.900;QD=0.84;ReadPosRankSum=0.461;VQSLOD=1.4948;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:13,0:13:17.29:17,0,47	0/0:2,0:2:6.02:0,6,96	1/1:15,0:3:1.55:4,2,0	0/0:19,0:4:0.47:0,0,1	0/1:16,3:19:27.68:28,0,508	0/0:22,0:22:29.91:0,30,439	./.	0/0:34,0:30:37.86:0,38,337	0/0:12,0:12:1.33:0,1,121	0/0:13,0:13:27.09:0,27,419	0/0:16,4:20:2.68:0,3,466	0/1:13,0:13:29.50:30,0,32	0/1:15,0:15:19.37:27,0,19	0/0:12,0:12:36.12:0,36,560	0/0:5,0:5:15.04:0,15,218	0/1:9,0:9:3.50:10,0,3	0/1:11,3:14:39.71:40,0,369	0/0:16,0:16:45.07:0,45,618	0/0:10,0:4:2.97:0,3,20	0/0:2,0:2:0:0,0,0	./.	./.	0/0:3,0:3:3.95:0,4,28	1/1:4,0:4:0.75:25,1,0	0/0:19,0:20:45.14:0,45,701	0/1:20,3:22:55.04:55,0,582	0/0:3,0:3:0:0,0,0	0/1:13,0:14:5.81:6,0,334
chr10	50831348	.	T	TCA	2821.74	PASS	AB=0.500;AC=19;AF=0.339;AN=56;BaseQRankSum=7.359;DP=337;FS=1.083;HRun=0;HaplotypeScore=57.3149;InbreedingCoeff=0.8107;MQ=67.46;MQ0=2;MQRankSum=0.011;QD=27.94;ReadPosRankSum=2.049;VQSLOD=4.7920;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:12,2:14:27.07:357,27,0	0/0:2,0:2:6.02:0,6,84	0/0:19,0:9:8.33:0,8,148	0/0:13,0:8:0.56:0,1,99	0/0:19,0:19:51.05:0,51,633	1/1:11,8:21:54.13:820,54,0	0/1:0,3:3:0:0,0,0	0/0:27,0:24:47.17:0,47,628	1/1:4,10:14:17.88:273,18,0	0/0:12,0:12:3.56:0,4,373	0/0:20,0:20:45.14:0,45,602	1/1:15,0:15:36.04:426,36,0	1/1:17,0:17:51.14:619,51,0	0/0:12,0:12:36.10:0,36,485	0/0:12,0:12:30.97:0,31,400	1/1:5,1:6:12.03:132,12,0	0/0:15,0:15:42.12:0,42,550	0/0:14,0:14:34.27:0,34,407	0/0:1,0:1:3.01:0,3,38	0/0:7,0:7:18.06:0,18,247	0/0:3,0:3:6.02:0,6,78	1/1:2,0:2:6.02:97,6,0	1/1:3,1:4:12.04:169,12,0	1/1:5,0:5:12.03:125,12,0	0/0:17,0:17:45.62:0,46,623	0/0:26,0:25:72.17:0,72,936	0/0:6,0:6:12.02:0,12,146	0/0:11,0:11:21.53:0,22,294
chr10	50832755	.	TGCTTACACGCTTACAC	T	2926.44	PASS	AC=20;AF=0.370;AN=54;BaseQRankSum=4.061;DP=828;FS=1.475;HRun=0;HaplotypeScore=329.8447;InbreedingCoeff=0.7773;MQ=69.54;MQ0=6;MQRankSum=-4.149;QD=9.50;ReadPosRankSum=0.040;VQSLOD=1.7947;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:31,9:40:0.05:87,0,0	0/0:14,0:14:15.01:0,15,587	0/0:31,0:29:0:0,0,0	./.	0/0:18,0:17:15.05:0,15,535	1/1:19,0:19:9.03:201,9,0	1/1:27,0:27:20.97:269,21,0	0/0:33,0:33:0:0,0,0	1/1:20,14:34:18.06:711,18,0	0/0:39,0:39:33.11:0,33,1240	0/0:22,0:22:6.02:0,6,345	1/1:24,9:33:12.04:417,12,0	1/1:40,9:49:17.91:748,18,0	0/0:32,0:32:45.15:0,45,2214	0/0:40,0:40:36.10:0,36,1738	1/1:23,9:32:5.81:233,6,0	0/0:35,0:35:54.18:0,54,2896	0/0:12,0:12:9.03:0,9,596	0/0:23,0:23:6.02:0,6,269	0/0:26,0:26:21.07:0,21,1055	0/0:48,0:47:42.14:0,42,2340	1/1:22,5:27:3.01:129,3,0	1/1:12,3:15:3.01:78,3,0	1/1:32,0:32:16.74:238,17,0	0/0:38,0:37:27.09:0,27,875	0/0:26,0:26:24.08:0,24,1088	0/0:33,0:33:36.12:0,36,1901	0/0:25,0:25:36.05:0,36,1626
chr10	50845136	.	GGT	G	1300.44	PASS	AB=0.938;AC=24;AF=0.462;AN=52;BaseQRankSum=4.209;DP=577;FS=0.000;HRun=0;HaplotypeScore=82.5100;InbreedingCoeff=0.5153;MQ=68.32;MQ0=4;MQRankSum=0.297;QD=4.93;ReadPosRankSum=2.090;VQSLOD=2.5514;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:20,2:23:20.56:152,21,0	0/0:12,0:12:5.95:0,6,62	./.	./.	0/0:15,0:15:21.07:0,21,309	1/1:22,0:22:11.98:101,12,0	0/1:14,2:17:29.65:97,0,30	0/0:26,0:26:8.96:0,9,80	1/1:3,7:11:23.90:242,24,0	0/1:20,0:20:17.56:18,0,106	0/0:22,0:21:6.94:0,7,233	1/1:16,2:17:8.81:78,9,0	1/1:10,6:16:15.04:163,15,0	0/0:14,0:14:10.31:0,10,195	0/1:16,2:18:37.96:38,0,266	1/1:13,5:18:14.87:144,15,0	0/0:39,2:42:18.64:0,19,635	0/0:25,2:26:4.79:0,5,399	0/0:18,0:19:5.99:0,6,49	0/0:13,0:22:3.66:0,4,48	0/0:23,0:25:6.32:0,6,85	1/1:16,2:18:14.69:132,15,0	1/1:19,5:25:7.57:69,8,0	1/1:20,6:27:20.89:209,21,0	0/0:20,0:19:23.86:0,24,303	0/1:27,0:27:14.47:14,0,184	0/0:13,0:19:14.89:0,15,115	1/1:2,1:3:3:33,3,0
chr10	50845250	.	C	CTCTCTTCTCTTCTCT	17462.76	PASS	AC=34;AF=0.654;AN=52;BaseQRankSum=9.227;DP=680;FS=16.059;HRun=0;HaplotypeScore=280.8189;InbreedingCoeff=0.9696;MQ=68.26;MQ0=4;MQRankSum=-9.443;QD=43.44;ReadPosRankSum=-2.673;VQSLOD=2.8448;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:31,0:31:33.11:1010,33,0	1/1:13,0:12:15.02:544,15,0	./.	./.	0/0:30,0:31:54.19:0,54,1614	1/1:30,0:29:53.96:1426,54,0	1/1:18,0:21:9.03:188,9,0	1/1:36,0:35:15.02:160,15,0	1/1:18,0:19:45.05:1590,45,0	0/0:33,0:34:48:0,48,1582	0/0:24,0:24:33.10:0,33,941	1/1:31,0:30:51.12:1927,51,0	1/1:38,0:38:63.48:1889,63,0	0/0:19,0:19:33:0,33,974	1/1:25,0:25:48.05:1810,48,0	1/1:21,0:21:42.10:1542,42,0	0/0:30,0:30:36.10:0,36,1079	0/0:12,0:12:15.03:0,15,396	1/1:11,0:10:12.01:369,12,0	1/1:18,6:27:27.01:861,27,0	1/1:11,0:11:12.04:448,12,0	1/1:23,0:23:24.04:791,24,0	1/1:20,0:24:50.71:1292,51,0	1/1:17,0:17:17.95:325,18,0	0/0:30,0:30:42.14:0,42,1531	0/0:33,0:33:50.69:0,51,1066	1/1:13,8:20:21.07:1290,21,0	0/0:12,0:12:21.07:0,21,778
chr10	50847275	.	GACAC	G	742.84	PASS	AB=0.924;AC=16;AF=0.400;AN=40;BaseQRankSum=3.081;DP=425;FS=8.891;HRun=0;HaplotypeScore=82.8000;InbreedingCoeff=0.2581;MQ=86.12;MQ0=8;MQRankSum=0.079;QD=3.47;ReadPosRankSum=2.498;VQSLOD=0.9033;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:28,3:31:11.52:143,12,0	./.	./.	./.	0/0:6,0:6:12.04:0,12,281	0/0:13,0:16:2.74:0,3,12	0/1:26,1:27:50.84:51,0,124	./.	1/1:13,0:13:3:28,3,0	./.	./.	1/1:9,0:9:5.97:92,6,0	1/1:11,2:13:6.02:92,6,0	0/0:10,0:10:6.02:0,6,140	0/1:16,2:21:32:32,0,33	0/0:9,0:9:6.02:0,6,140	0/1:22,0:23:12.98:13,0,668	0/0:12,0:12:8.96:0,9,158	0/0:6,0:5:3.01:0,3,70	0/0:6,0:6:3.01:0,3,70	0/1:28,1:28:25.36:25,0,270	./.	1/1:9,0:10:3:28,3,0	1/1:24,11:35:26.97:377,27,0	0/0:7,0:6:3.01:0,3,70	0/0:7,0:7:6.02:0,6,141	0/0:8,0:8:11.38:0,11,163	./.
chr10	50847436	.	GTATATATATATATATATATATATATATATATA	G	5598.06	PASS	AC=20;AF=0.556;AN=36;BaseQRankSum=4.011;DP=192;FS=4.324;HRun=0;HaplotypeScore=138.5469;InbreedingCoeff=0.5578;MQ=69.09;MQ0=1;MQRankSum=-3.284;QD=51.36;ReadPosRankSum=3.429;VQSLOD=3.5543;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:13,6:19:12.04:860,12,0	1/1:4,0:4:3.01:74,3,0	./.	0/0:6,0:6:0.47:0,0,1	0/0:4,0:4:5.61:0,6,148	1/1:4,10:15:21.07:1673,21,0	./.	./.	1/1:4,2:6:6.02:492,6,0	0/0:8,0:8:3:0,3,28	0/0:1,0:1:3:0,3,26	1/1:5,0:5:3.01:52,3,0	1/1:7,6:14:15.05:1167,15,0	./.	1/1:11,3:14:9.03:738,9,0	./.	0/0:11,0:21:27.94:0,28,2366	0/0:5,0:5:12.04:0,12,1201	./.	./.	0/0:2,0:2:2.99:0,3,24	1/1:5,0:5:3.01:50,3,0	1/1:12,6:19:5.70:469,6,0	1/1:7,0:7:2.99:24,3,0	./.	./.	./.	0/0:4,0:4:3.01:0,3,403
chr10	50848466	.	C	CTTT	3097.39	PASS	AB=0.914;AC=36;AF=0.692;AN=52;BaseQRankSum=3.036;DP=230;FS=2.962;HRun=1;HaplotypeScore=72.9259;InbreedingCoeff=-0.1872;MQ=32.01;MQ0=29;MQRankSum=-2.913;QD=15.56;ReadPosRankSum=1.902;VQSLOD=0.7801;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:6,1:9:46.25:223,0,46	1/1:3,0:3:6.02:71,6,0	./.	./.	1/1:3,0:3:8.35:68,8,0	1/1:2,6:7:6.02:141,6,0	0/1:5,5:9:12.95:138,0,13	0/1:16,0:11:38.05:98,0,38	1/1:2,8:8:12.04:272,12,0	1/1:3,0:2:6.02:84,6,0	0/1:4,0:4:29.54:30,0,71	1/1:0,9:10:3.01:71,3,0	1/1:3,5:9:11.80:259,12,0	0/1:5,0:5:4.13:63,0,4	1/1:1,6:8:8.84:201,9,0	0/1:6,0:6:10.63:61,0,11	1/1:9,0:9:12.90:173,13,0	0/1:2,0:2:35.95:36,0,44	0/0:7,0:5:12.04:0,12,171	0/1:6,0:5:64.77:65,0,97	1/1:14,0:11:9.03:129,9,0	0/1:3,13:15:21.52:206,0,22	1/1:11,1:12:29.17:365,29,0	1/1:6,13:19:21.46:347,21,0	0/1:6,0:5:18.51:32,0,19	0/1:8,0:6:34.84:35,0,103	0/1:3,0:3:39.81:86,0,40	0/0:5,0:4:2.94:0,3,18
chr10	50849711	.	CAG	C	5237.59	PASS	AB=0.833;AC=25;AF=0.446;AN=56;BaseQRankSum=12.841;DP=723;FS=0.000;HRun=0;HaplotypeScore=91.1062;InbreedingCoeff=0.5409;MQ=67.76;MQ0=0;MQRankSum=0.435;QD=13.16;ReadPosRankSum=3.401;VQSLOD=4.6471;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:12,32:47:68.87:762,69,0	1/1:3,1:4:3.01:35,3,0	0/0:29,0:21:1.01:0,1,43	0/0:29,0:16:11.69:0,12,107	0/1:25,3:28:50.66:51,0,617	1/1:3,19:24:47.81:518,48,0	1/1:12,18:32:46.87:547,47,0	0/0:30,0:30:44.60:0,45,560	1/1:8,15:23:33.10:385,33,0	0/1:22,5:27:49.29:49,0,463	0/1:17,0:17:22.50:22,0,428	1/1:6,14:22:35.77:377,36,0	1/1:2,19:25:41.45:406,41,0	0/0:25,2:27:25.21:0,25,820	1/1:9,26:37:68.87:762,69,0	0/0:27,1:28:19.07:0,19,732	0/0:14,0:15:42.13:0,42,637	0/0:19,0:20:45.12:0,45,655	0/0:15,0:16:0.88:0,1,152	0/0:26,1:27:16.18:0,16,667	0/1:30,6:36:99:150,0,549	1/1:8,24:33:41.96:469,42,0	0/1:4,12:18:9.09:307,0,9	1/1:13,11:25:35.94:399,36,0	0/0:29,0:29:8.81:0,9,835	0/0:32,0:32:58.35:0,58,794	0/0:32,1:34:23.05:0,23,935	0/0:8,0:8:12.04:0,12,184
chr10	50851103	.	A	AT	4207.46	PASS	AB=0.711;AC=31;AF=0.554;AN=56;BaseQRankSum=2.616;DP=580;FS=3.809;HRun=12;HaplotypeScore=72.2695;InbreedingCoeff=0.8138;MQ=72.06;MQ0=0;MQRankSum=-0.325;QD=11.72;ReadPosRankSum=-1.155;VQSLOD=3.2501;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,1:26:10.65:213,11,0	0/1:1,7:8:6.89:102,0,7	0/0:11,0:11:12.92:0,13,77	0/1:10,0:10:0.85:1,0,32	0/0:25,0:26:55.65:0,56,398	1/1:4,4:23:51.81:308,52,0	1/1:2,0:17:25.57:128,26,0	0/1:11,21:33:17.48:463,0,17	1/1:2,1:21:42.89:231,43,0	0/0:19,0:20:36.96:0,37,266	0/0:23,0:24:56.51:0,57,397	1/1:5,0:21:28.52:147,29,0	1/1:5,1:26:36.83:185,37,0	0/0:18,0:18:35.74:0,36,262	1/1:4,23:29:21.96:510,22,0	0/0:21,1:22:25.21:0,25,323	0/0:20,0:20:47.71:0,48,350	0/0:14,0:14:38.78:0,39,285	1/1:9,11:21:18.48:308,18,0	1/1:7,20:29:60.61:546,61,0	1/1:0,13:14:23.87:219,24,0	1/1:6,0:23:23.92:201,24,0	1/1:7,1:22:37.22:204,37,0	1/1:0,2:11:25.89:158,26,0	0/0:22,0:23:55.66:0,56,397	0/0:30,0:31:67.11:0,67,486	1/1:5,19:25:13.99:285,14,0	0/0:12,0:12:17.80:0,18,131
chr10	50852021	.	A	AAG	4343.68	PASS	AB=0.541;AC=19;AF=0.339;AN=56;BaseQRankSum=-8.841;DP=833;FS=0.000;HRun=0;HaplotypeScore=109.2863;InbreedingCoeff=0.9188;MQ=67.55;MQ0=14;MQRankSum=2.752;QD=19.57;ReadPosRankSum=3.010;VQSLOD=4.7950;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,21:27:30.10:498,30,0	1/1:0,9:9:15.05:229,15,0	0/0:79,0:38:29.56:0,30,363	0/0:115,0:35:40.64:0,41,361	0/0:24,0:24:63.19:0,63,777	1/1:4,22:28:15.05:249,15,0	1/1:3,20:23:15.05:249,15,0	0/0:36,0:36:84.23:0,84,1005	1/1:1,17:18:24.07:363,24,0	0/0:33,0:33:84.26:0,84,1046	0/0:19,0:19:44.97:0,45,531	1/1:5,21:26:23.13:590,23,0	0/0:25,0:25:48.10:0,48,558	0/0:25,1:26:19.36:0,19,776	1/1:3,26:29:44.71:747,45,0	0/0:24,0:24:61.70:0,62,741	0/0:24,0:24:57.16:0,57,694	0/0:17,0:17:42.07:0,42,507	0/0:17,0:18:47.96:0,48,556	0/0:28,0:28:75.19:0,75,899	0/0:24,0:24:57.46:0,57,754	1/1:1,14:15:21.07:335,21,0	0/1:3,17:20:7.74:419,0,8	1/1:7,20:26:41.99:664,42,0	0/0:24,0:24:57.12:0,57,686	0/0:32,0:32:87.27:0,87,1086	0/0:40,0:39:99:0,105,1288	0/0:21,1:22:13.36:0,13,706
chr10	50852790	.	C	CA	5342.21	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=15.410;DP=606;FS=3.236;HRun=0;HaplotypeScore=73.7450;InbreedingCoeff=0.9853;MQ=77.58;MQ0=0;MQRankSum=-1.015;QD=40.47;ReadPosRankSum=-3.895;VQSLOD=3.7181;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:93.30:0,93,1283	0/0:7,0:7:21.03:0,21,271	0/0:11,0:11:32.30:0,32,407	0/0:19,0:19:52.90:0,53,652	0/0:21,0:21:63.12:0,63,827	0/0:22,0:22:63.21:0,63,881	0/0:21,0:21:57.19:0,57,797	1/1:0,27:27:78.19:1095,78,0	0/0:26,0:26:78.18:0,78,1031	0/0:20,0:20:57.13:0,57,750	0/0:13,0:13:36.11:0,36,487	0/0:27,0:27:78.22:0,78,1068	0/0:18,0:18:51.16:0,51,695	0/0:23,0:23:66.20:0,66,891	0/0:31,0:31:93.29:0,93,1267	0/0:9,0:9:27.05:0,27,339	0/0:21,0:21:60.20:0,60,835	0/0:3,0:3:9.03:0,9,126	1/1:0,14:14:39.10:534,39,0	1/1:0,34:34:93.31:1387,93,0	1/1:1,24:25:63.21:940,63,0	0/0:34,0:34:99:0,99,1336	0/0:24,0:24:63.21:0,63,880	0/0:36,0:36:99:0,102,1377	0/0:13,0:13:39.08:0,39,492	0/0:30,0:30:84.26:0,84,1128	1/1:0,32:32:93.31:1386,93,0	0/0:13,0:13:39.11:0,39,526
chr10	50853096	.	CA	C	278.65	PASS	AC=16;AF=1.000;AN=16;DP=23;FS=0.000;HRun=4;HaplotypeScore=6.3546;MQ=27.52;MQ0=3;QD=16.39;VQSLOD=2.0451;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	./.	./.	./.	./.	./.	1/1:0,1:1:3.01:36,3,0	./.	./.	./.	1/1:0,1:1:3.01:36,3,0	./.	1/1:0,1:1:3.01:36,3,0	1/1:0,2:2:3.01:36,3,0	1/1:0,1:1:3.01:36,3,0	./.	./.	./.	./.	./.	./.	1/1:1,3:4:6.01:61,6,0	1/1:0,4:2:6.02:72,6,0	./.	1/1:0,3:2:3.01:36,3,0
chr10	50861163	.	C	CT	4678.81	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-10.850;DP=731;FS=21.419;HRun=3;HaplotypeScore=70.6000;InbreedingCoeff=0.9999;MQ=92.80;MQ0=0;MQRankSum=-4.031;QD=35.18;ReadPosRankSum=-2.163;VQSLOD=2.5171;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,126,1423	0/0:19,0:19:54.13:0,54,630	0/0:31,0:31:68.97:0,69,801	0/0:35,0:35:57.89:0,58,729	0/0:21,0:21:60.17:0,60,708	0/0:16,0:16:48.15:0,48,576	0/0:20,0:20:54.15:0,54,636	1/1:1,38:39:99:1532,114,0	0/0:17,0:17:51.16:0,51,612	0/0:34,0:34:95.29:0,95,1086	0/0:20,0:20:40.04:0,40,534	0/0:28,0:28:78.23:0,78,926	0/0:24,0:24:66.18:0,66,771	0/0:33,0:33:99:0,99,1175	0/0:32,0:32:96.25:0,96,1105	0/0:24,0:24:60.17:0,60,709	0/0:38,0:38:99:0,105,1245	0/0:16,0:16:45.10:0,45,514	1/1:3,12:15:42.13:567,42,0	1/1:2,30:32:81.23:1110,81,0	1/1:2,18:20:36.12:504,36,0	0/0:21,0:21:60.18:0,60,719	0/0:20,0:20:57.17:0,57,684	0/0:30,0:30:81.07:0,81,911	0/0:25,0:25:72.22:0,72,863	0/0:33,0:33:87.25:0,87,1029	1/1:0,27:27:69.23:966,69,0	0/0:16,0:16:42.13:0,42,504
chr10	50861548	.	G	GA	4686.38	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=-11.202;DP=548;FS=1.198;HRun=9;HaplotypeScore=53.7396;InbreedingCoeff=0.8747;MQ=78.57;MQ0=0;MQRankSum=0.755;QD=20.74;ReadPosRankSum=2.334;VQSLOD=5.5702;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,12:19:27.07:299,27,0	1/1:5,6:11:18.01:186,18,0	0/1:13,0:13:14.98:15,0,112	0/0:14,0:14:10.54:0,11,142	0/0:24,0:24:64.67:0,65,541	1/1:4,11:15:7.37:306,7,0	1/1:3,12:15:33.09:365,33,0	0/0:25,0:25:62.96:0,63,544	1/1:2,17:19:45.12:498,45,0	0/0:22,0:22:50.94:0,51,437	0/0:17,1:18:8.80:0,9,305	1/1:5,22:27:51.09:550,51,0	1/1:8,19:27:54.15:597,54,0	0/0:14,0:14:35.99:0,36,313	1/1:8,18:26:51.14:564,51,0	0/0:16,0:16:32.97:0,33,283	0/0:20,0:19:56.96:0,57,490	0/0:22,0:22:65.92:0,66,560	0/0:16,0:16:41.99:0,42,365	0/0:21,0:21:32.64:0,33,286	0/0:18,4:22:11.80:0,12,331	1/1:5,13:19:38.86:385,39,0	1/1:2,22:24:57.15:631,57,0	1/1:3,8:11:27.06:291,27,0	0/0:13,3:16:3.69:0,4,255	0/0:20,0:20:41.93:0,42,362	0/0:42,0:42:98.94:0,99,859	0/0:10,0:10:26.99:0,27,234
chr10	50862114	.	A	AT	15500.81	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=-15.225;DP=682;FS=0.000;HRun=2;HaplotypeScore=60.0585;InbreedingCoeff=0.9999;MQ=87.67;MQ0=0;MQRankSum=-3.468;QD=38.18;ReadPosRankSum=1.941;VQSLOD=5.3742;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,29:34:81.27:1166,81,0	1/1:1,13:14:39.13:562,39,0	0/0:29,0:29:81.22:0,81,971	0/0:19,0:19:50.89:0,51,605	0/0:33,0:33:96.27:0,96,1163	1/1:2,28:30:78.26:1123,78,0	1/1:1,27:28:63.17:884,63,0	1/1:1,30:31:90.30:1296,90,0	1/1:1,23:24:69.23:993,69,0	0/0:34,0:34:99:0,99,1226	0/0:33,0:33:96.30:0,96,1189	1/1:0,12:12:33.11:475,33,0	1/1:0,38:38:99:1512,105,0	0/0:14,0:14:33.10:0,33,409	1/1:0,24:24:66.22:950,66,0	0/0:23,0:23:69.22:0,69,855	0/0:15,0:15:42.13:0,42,521	0/0:13,0:13:39.08:0,39,466	1/1:2,15:17:45.15:648,45,0	1/1:0,27:27:81.23:1143,81,0	1/1:1,24:25:66.22:950,66,0	1/1:2,23:25:66.22:950,66,0	1/1:2,21:23:51.17:735,51,0	1/1:0,19:19:42.14:604,42,0	0/0:27,0:27:78.24:0,78,967	0/0:23,0:23:63.19:0,63,769	1/1:0,33:34:99:1509,105,0	0/0:13,0:13:36.11:0,36,446
chr10	50862498	.	GC	G	4032.20	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=11.413;DP=635;FS=0.000;HRun=4;HaplotypeScore=59.2740;InbreedingCoeff=0.9979;MQ=84.96;MQ0=0;MQRankSum=-0.350;QD=32.78;ReadPosRankSum=-0.930;VQSLOD=3.6899;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:96.28:0,96,1304	0/0:13,0:13:36.12:0,36,504	0/0:21,1:22:27.39:0,27,803	0/0:19,0:18:42.14:0,42,581	0/0:41,0:41:99:0,117,1578	0/0:22,0:22:63.21:0,63,880	0/0:26,0:26:75.25:0,75,1049	1/1:3,21:24:63.19:756,63,0	0/0:16,0:16:42.12:0,42,555	0/0:21,0:21:60.19:0,60,825	0/0:24,0:24:72.24:0,72,1006	0/0:22,0:22:63.20:0,63,863	0/0:18,0:18:51.16:0,51,697	0/0:25,0:25:72.23:0,72,980	0/0:23,0:23:69.23:0,69,966	0/0:26,0:26:75.25:0,75,1050	0/0:28,0:28:84.27:0,84,1157	0/0:19,0:19:54.17:0,54,735	1/1:1,22:23:66.20:792,66,0	1/1:1,27:28:75.23:900,75,0	1/1:2,22:24:66.20:792,66,0	0/0:20,0:20:55.73:0,56,755	0/0:18,0:18:54.17:0,54,737	0/0:20,0:20:51.16:0,51,695	0/0:22,0:22:66.22:0,66,923	0/0:25,0:25:72.23:0,72,991	1/1:0,24:24:66.20:792,66,0	0/0:6,0:6:18.06:0,18,252
chr10	50863235	.	TTGTCTTTG	T	12087.84	PASS	AB=0.541;AC=21;AF=0.375;AN=56;BaseQRankSum=15.936;DP=709;FS=5.296;HRun=0;HaplotypeScore=185.8070;InbreedingCoeff=0.9189;MQ=80.26;MQ0=4;MQRankSum=-17.637;QD=47.78;ReadPosRankSum=3.192;VQSLOD=4.5871;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,28:35:60.16:1587,60,0	1/1:0,7:7:18.06:495,18,0	0/0:25,0:25:40.31:0,40,2126	0/0:23,0:22:46.45:0,46,1884	0/0:27,0:27:63.22:0,63,2648	1/1:1,21:22:45.15:1237,45,0	1/1:6,16:22:36.12:990,36,0	0/0:30,0:30:81.27:0,81,3257	0/1:3,17:19:85.36:1110,0,85	0/0:28,0:28:75.25:0,75,3094	0/0:13,0:13:36.12:0,36,1531	1/1:7,24:30:69.24:1887,69,0	1/1:1,25:26:69.24:1897,69,0	0/0:33,0:33:93.32:0,93,3963	1/1:3,21:24:42.14:1155,42,0	0/0:29,0:29:84.29:0,84,3647	0/0:46,0:46:99:0,132,5590	0/0:22,0:22:63.22:0,63,2726	0/0:22,0:22:60.19:0,60,2324	0/0:32,0:32:90.30:0,90,3688	0/0:33,0:33:96.32:0,96,4015	1/1:5,15:20:18.06:495,18,0	1/1:10,19:28:30.10:825,30,0	1/1:5,11:15:15.05:412,15,0	0/0:21,0:21:57.18:0,57,2247	0/0:28,0:28:81.26:0,81,3180	0/0:31,0:31:93.32:0,93,3938	0/0:13,0:13:30.10:0,30,1283
chr10	50863473	.	GT	G	6238.88	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-1.623;DP=755;FS=2.365;HRun=1;HaplotypeScore=136.4976;InbreedingCoeff=0.9980;MQ=90.65;MQ0=0;MQRankSum=-0.877;QD=38.99;ReadPosRankSum=0.286;VQSLOD=4.4250;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:72.23:0,72,1116	0/0:11,0:11:33.11:0,33,520	0/0:30,0:30:77.37:0,77,1287	0/0:29,0:29:84.64:0,85,1234	0/0:32,0:32:96.33:0,96,1535	0/0:29,0:29:81.26:0,81,1271	0/0:21,0:21:63.19:0,63,975	1/1:0,31:31:93.29:1266,93,0	0/0:32,0:32:93.32:0,93,1477	0/0:38,0:38:99:0,114,1815	0/0:22,0:22:66.23:0,66,1053	0/0:27,0:27:81.28:0,81,1292	0/0:30,0:30:87.29:0,87,1354	0/0:24,0:24:72.23:0,72,1118	0/0:33,0:33:99:0,99,1560	0/0:24,0:24:72.25:0,72,1148	0/0:25,0:25:75.26:0,75,1198	0/0:22,0:22:66.17:0,66,1003	1/1:1,15:16:48.16:658,48,0	1/1:1,28:29:33.30:1042,33,0	1/1:0,48:48:99:1888,135,0	0/0:36,0:36:99:0,105,1652	0/0:30,0:30:84.29:0,84,1343	0/0:14,0:14:42.14:0,42,668	0/0:30,0:30:90.31:0,90,1429	0/0:26,0:26:78.26:0,78,1235	1/1:0,36:36:99:1384,99,0	0/0:6,0:6:18.06:0,18,284
chr10	50864975	.	TTGTGTG	T	784.32	PASS	AC=20;AF=0.400;AN=50;BaseQRankSum=1.835;DP=531;FS=0.000;HRun=0;HaplotypeScore=105.5215;InbreedingCoeff=0.6703;MQ=62.38;MQ0=25;MQRankSum=0.442;QD=4.17;ReadPosRankSum=1.065;VQSLOD=1.8979;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:33,0:33:16.85:223,17,0	1/1:5,0:5:3.01:60,3,0	./.	./.	0/0:30,0:28:24.08:0,24,620	1/1:15,0:14:2.80:57,3,0	1/1:25,0:24:1.05:2,1,0	0/0:37,0:35:2.98:0,3,22	1/1:17,0:17:0.88:2,1,0	0/0:12,0:12:9.03:0,9,196	0/0:8,0:8:15.05:0,15,386	1/1:8,6:14:3.01:60,3,0	1/1:20,0:19:11.79:198,12,0	0/0:9,0:9:18.04:0,18,292	1/1:13,5:18:5.93:77,6,0	0/0:12,0:14:12.04:0,12,231	0/0:39,0:38:39.10:0,39,898	0/0:18,0:13:18.06:0,18,404	0/0:11,0:10:6.02:0,6,142	./.	0/0:34,0:32:27.35:0,27,608	1/1:13,6:18:12.04:216,12,0	0/0:15,0:15:0.98:0,1,186	1/1:15,0:22:4.37:51,4,0	0/0:10,0:10:12.02:0,12,145	0/0:19,0:16:9.03:0,9,164	0/0:18,0:18:14.84:0,15,256	0/0:4,0:4:9.03:0,9,216
chr10	50865909	.	TGG	T	11895.99	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=16.940;DP=700;FS=5.780;HRun=3;HaplotypeScore=95.3386;InbreedingCoeff=0.9980;MQ=88.96;MQ0=1;MQRankSum=-6.398;QD=40.33;ReadPosRankSum=2.086;VQSLOD=4.2416;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,62:63:99:2387,157,0	1/1:0,9:9:24.08:358,24,0	0/0:30,0:30:87.13:0,87,1506	0/0:23,0:23:16.21:0,16,989	0/0:24,0:24:72.24:0,72,1350	1/1:0,25:24:69.17:1028,69,0	1/1:0,23:23:63.21:964,63,0	0/0:35,0:35:99:0,102,1783	1/1:0,23:23:66.19:1008,66,0	0/0:34,0:34:96.33:0,96,1848	0/0:22,0:22:63.21:0,63,1181	1/1:0,22:22:63.21:964,63,0	1/1:0,20:20:57.19:872,57,0	0/0:20,0:20:60.21:0,60,1159	1/1:1,33:34:84.29:1285,84,0	0/0:20,0:20:60.19:0,60,1096	0/0:20,0:20:60.19:0,60,1127	0/0:18,0:18:51.17:0,51,984	0/0:18,0:18:51.15:0,51,949	0/0:25,0:25:72.25:0,72,1383	0/0:20,0:20:60.20:0,60,1128	1/1:1,29:30:81.28:1239,81,0	1/1:0,19:19:51.17:780,51,0	1/1:2,25:27:66.22:1010,66,0	0/0:21,0:21:63.22:0,63,1217	0/0:21,0:21:63.22:0,63,1204	0/0:33,0:33:99:0,99,1878	0/0:21,0:21:63.22:0,63,1216
chr10	50867356	.	TATGTG	T	9169.22	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=16.525;DP=665;FS=2.910;HRun=0;HaplotypeScore=144.6950;InbreedingCoeff=0.9867;MQ=66.37;MQ0=0;MQRankSum=-17.626;QD=41.68;ReadPosRankSum=-1.924;VQSLOD=4.7182;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,13:18:36.08:587,36,0	1/1:1,4:5:12.04:235,12,0	0/0:20,0:19:39.10:0,39,940	0/0:18,0:18:34.65:0,35,812	0/0:24,0:24:72.25:0,72,2076	1/1:7,24:31:64.10:1227,64,0	1/1:4,12:16:36.12:696,36,0	0/0:45,0:45:99:0,108,3078	1/1:7,16:23:51.18:999,51,0	0/0:30,0:30:84.29:0,84,2429	0/0:23,0:23:54.19:0,54,1598	1/1:2,20:22:57.19:1051,57,0	1/1:3,23:26:60.20:1126,60,0	0/0:29,0:29:78.27:0,78,2309	1/1:4,35:38:83.86:1598,84,0	0/0:36,0:36:87.30:0,87,2526	0/0:15,0:15:39.13:0,39,1152	0/0:9,0:9:24.08:0,24,711	0/0:18,0:18:39.12:0,39,1077	0/0:32,0:32:84.29:0,84,2429	0/0:38,0:38:99:0,114,3345	1/1:2,10:12:27.09:529,27,0	1/1:5,19:24:51.17:946,51,0	1/1:0,4:4:9.03:175,9,0	0/0:18,0:18:51.18:0,51,1496	0/0:36,0:36:87.30:0,87,2520	0/0:35,0:35:99:0,102,2985	0/0:18,0:18:54.19:0,54,1533
chr10	50867515	.	A	AAT	5742.11	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-5.959;DP=582;FS=4.845;HRun=0;HaplotypeScore=71.0910;InbreedingCoeff=0.9516;MQ=62.41;MQ0=6;MQRankSum=-1.932;QD=31.04;ReadPosRankSum=3.477;VQSLOD=6.4193;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,21:24:57.20:968,57,0	1/1:2,5:7:6.02:102,6,0	0/0:14,0:11:9.31:0,9,136	0/0:10,0:6:15.02:0,15,160	0/0:22,0:22:51.16:0,51,650	1/1:6,21:27:45.15:748,45,0	1/1:2,5:7:15.05:255,15,0	0/0:33,0:33:75.23:0,75,963	1/1:3,13:16:33.11:560,33,0	0/0:37,0:37:90.29:0,90,1170	0/0:27,0:27:78.25:0,78,1013	1/1:3,14:17:39.13:662,39,0	1/1:1,18:18:45.15:764,45,0	0/0:29,0:29:75.22:0,75,939	1/1:6,27:32:54.18:917,54,0	0/0:23,0:23:60.20:0,60,780	0/0:24,0:24:57.18:0,57,739	0/0:25,0:25:56.69:0,57,670	0/0:13,0:13:36.11:0,36,454	0/0:27,0:27:81.26:0,81,1040	0/0:10,0:10:18.06:0,18,234	1/1:2,6:9:12.04:204,12,0	1/1:2,16:18:27.08:459,27,0	1/1:2,3:4:6.02:102,6,0	0/0:31,0:31:81.23:0,81,1012	0/0:26,0:26:66.21:0,66,846	0/0:30,0:30:81.25:0,81,1039	0/0:16,0:16:32.80:0,33,496
chr10	50868714	.	T	TA	8612.66	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-16.015;DP=624;FS=0.000;HRun=3;HaplotypeScore=56.5961;InbreedingCoeff=0.9886;MQ=70.71;MQ0=0;MQRankSum=-0.449;QD=36.19;ReadPosRankSum=2.159;VQSLOD=5.3165;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,23:24:57.19:798,57,0	1/1:0,11:11:33.11:462,33,0	0/0:13,0:13:10.53:0,11,163	0/0:10,0:9:14.78:0,15,151	0/0:40,0:40:99:0,114,1357	1/1:1,27:28:81.27:1134,81,0	1/1:1,15:16:36.12:504,36,0	0/0:31,0:31:84.25:0,84,999	1/1:2,12:14:36.12:504,36,0	0/0:29,0:29:84.25:0,84,999	0/0:26,0:26:75.20:0,75,875	1/1:4,16:20:45.15:630,45,0	1/1:0,29:29:87.29:1218,87,0	0/0:32,0:32:90.26:0,90,1068	1/1:1,31:32:78.26:1093,78,0	0/0:25,0:25:69.21:0,69,828	0/0:15,0:15:42.13:0,42,503	0/0:7,0:7:21.06:0,21,251	0/0:23,0:23:60.18:0,60,719	0/0:27,0:27:72.22:0,72,864	0/0:12,0:12:33.10:0,33,396	1/1:2,19:21:51.17:714,51,0	1/1:0,27:27:72.24:1008,72,0	1/1:1,15:16:39.13:546,39,0	0/0:30,0:30:78.21:0,78,912	0/0:27,0:27:78.23:0,78,925	0/0:34,0:34:96.28:0,96,1139	0/0:5,0:5:15.05:0,15,180
chr10	50869447	.	C	CT	10297.38	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-0.111;DP=748;FS=11.760;HRun=5;HaplotypeScore=80.4386;InbreedingCoeff=0.9657;MQ=94.15;MQ0=1;MQRankSum=-5.882;QD=32.28;ReadPosRankSum=4.340;VQSLOD=4.6227;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,33:37:87.28:1145,87,0	1/1:2,10:12:0.88:363,1,0	0/0:35,0:35:84.95:0,85,868	0/0:35,0:35:93.06:0,93,955	0/0:25,0:25:69.15:0,69,726	1/1:3,34:37:87.28:1145,87,0	1/1:0,14:14:36.12:474,36,0	0/0:36,0:36:87.19:0,87,915	1/1:0,25:25:69.05:845,69,0	0/0:32,0:32:90.21:0,90,953	0/0:17,0:17:42.10:0,42,451	1/1:3,38:41:96.24:1240,96,0	1/1:1,27:28:75.20:967,75,0	0/0:28,0:28:84.20:0,84,895	1/1:0,41:41:99:1281,102,0	0/0:29,0:29:72.16:0,72,766	0/0:17,0:17:48.09:0,48,506	0/0:12,0:12:36.09:0,36,387	0/0:18,0:17:45.10:0,45,477	0/0:34,0:34:96.23:0,96,1024	0/0:24,0:24:63.14:0,63,669	1/1:1,35:36:96.23:1221,96,0	1/1:1,24:25:69.22:907,69,0	1/1:1,22:23:54.18:711,54,0	0/0:21,0:21:60.14:0,60,637	0/0:24,0:24:63.15:0,63,670	0/0:31,0:31:87.18:0,87,916	0/0:11,0:11:24.06:0,24,258
chr10	50869619	.	A	ATTG	16632.62	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=20.449;DP=829;FS=1.563;HRun=0;HaplotypeScore=166.4699;InbreedingCoeff=0.9994;MQ=68.78;MQ0=0;MQRankSum=-19.644;QD=49.50;ReadPosRankSum=2.719;VQSLOD=6.4678;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,27:32:66.23:1438,66,0	1/1:2,15:17:48.10:1020,48,0	0/0:26,0:26:65.51:0,66,1023	0/0:28,0:28:51.06:0,51,806	0/0:32,0:32:93.32:0,93,1515	1/1:3,23:27:57.20:1269,57,0	1/1:5,18:23:60.21:1305,60,0	0/0:37,0:37:96.31:0,96,1518	1/1:7,30:37:81.05:1675,81,0	0/0:30,0:30:90.28:0,90,1413	0/0:27,0:27:75.26:0,75,1224	1/1:5,38:43:99:2488,114,0	1/1:3,34:38:96.33:2135,96,0	0/0:33,0:33:93.30:0,93,1488	1/1:9,32:41:93.25:2016,93,0	0/0:31,0:31:90.29:0,90,1443	0/0:31,0:31:90.28:0,90,1432	0/0:19,0:19:57.19:0,57,926	0/0:27,0:27:75.25:0,75,1201	0/0:30,0:30:81.26:0,81,1274	0/0:34,0:34:96.30:0,96,1510	1/1:9,23:32:69.07:1434,69,0	1/1:5,21:27:56.86:1119,57,0	1/1:5,12:18:33.58:734,34,0	0/0:30,0:30:87.30:0,87,1418	0/0:30,0:30:87.29:0,87,1399	0/0:41,0:40:99:0,117,1847	0/0:7,0:7:21.07:0,21,343
chr10	50870588	.	C	CGT	6907.75	PASS	AB=0.745;AC=40;AF=0.714;AN=56;BaseQRankSum=0.088;DP=694;FS=2.539;HRun=0;HaplotypeScore=125.3634;InbreedingCoeff=-0.0856;MQ=57.46;MQ0=8;MQRankSum=-0.677;QD=10.96;ReadPosRankSum=1.404;VQSLOD=4.9222;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:18,2:24:24.03:266,24,0	1/1:5,0:9:8.85:60,9,0	0/0:29,0:20:15.01:0,15,151	0/1:30,0:24:34.76:35,0,57	0/0:34,0:35:62.44:0,62,616	1/1:20,0:30:3.37:96,3,0	1/1:16,0:29:25.63:199,26,0	0/1:31,4:35:25.93:43,0,26	1/1:6,1:20:28.25:223,28,0	0/1:13,6:20:40.70:251,0,41	1/1:12,7:20:9.93:304,10,0	1/1:15,0:29:20.99:182,21,0	1/1:9,0:24:20.03:160,20,0	1/1:9,20:30:20.31:727,20,0	1/1:9,0:28:41.95:359,42,0	0/1:11,12:23:53.52:420,0,54	0/1:15,11:26:99:289,0,131	0/1:9,8:18:12.89:229,0,13	0/1:15,2:17:22.02:91,0,22	1/1:9,13:24:11.23:606,11,0	0/1:12,20:32:13.66:681,0,14	1/1:4,0:11:9.66:101,10,0	1/1:13,0:27:15.05:97,15,0	1/1:13,0:28:20.18:145,20,0	0/1:16,9:25:79.55:424,0,80	0/1:13,7:22:56.63:183,0,57	0/1:11,11:22:25.72:487,0,26	0/1:10,11:22:43.75:251,0,44
chr10	50871164	.	ATATG	A	4720.61	PASS	AB=0.773;AC=20;AF=0.370;AN=54;BaseQRankSum=10.845;DP=794;FS=8.132;HRun=0;HaplotypeScore=187.2062;InbreedingCoeff=0.2702;MQ=60.62;MQ0=1;MQRankSum=-10.154;QD=11.16;ReadPosRankSum=1.622;VQSLOD=3.8296;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:24,5:28:6.89:135,0,7	0/0:8,0:6:3.01:0,3,71	0/0:16,0:11:2.98:0,3,22	./.	0/0:34,0:34:63.22:0,63,1468	0/1:23,13:36:43.92:662,0,44	0/1:21,4:25:32.18:192,0,32	1/1:43,0:53:0.10:8,0,0	0/1:21,10:31:99:421,0,103	0/0:23,0:23:42.14:0,42,955	0/0:25,0:25:45.15:0,45,975	0/1:23,11:34:45.01:567,0,45	0/1:26,15:41:43.75:670,0,44	0/0:22,0:22:30.10:0,30,706	0/0:53,0:53:78.59:0,79,2070	0/0:32,0:31:60.19:0,60,1373	0/0:31,0:31:60.19:0,60,1356	0/0:18,0:18:26.60:0,27,601	1/1:9,0:21:18.45:191,18,0	1/1:12,0:27:43.55:413,44,0	1/1:22,0:22:4.34:25,4,0	0/1:18,9:27:11.09:457,0,11	0/1:18,10:28:81.25:381,0,81	1/1:17,4:21:16.37:237,16,0	0/0:36,0:36:72.25:0,72,1653	0/0:35,0:35:72.22:0,72,1615	1/1:10,0:27:39.04:363,39,0	0/0:19,0:19:36.12:0,36,792
chr10	50871213	.	GTA	G	2930.81	PASS	AB=0.770;AC=10;AF=0.179;AN=56;BaseQRankSum=9.659;DP=874;FS=0.815;HRun=0;HaplotypeScore=226.8944;InbreedingCoeff=-0.2197;MQ=53.05;MQ0=6;MQRankSum=-10.911;QD=9.25;ReadPosRankSum=-1.792;VQSLOD=2.8618;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:20,7:27:81.98:82,0,403	0/0:13,0:11:8.18:0,8,511	0/0:33,0:14:35.45:0,35,552	0/0:55,0:25:35.10:0,35,717	0/0:28,0:28:78.27:0,78,1419	0/1:21,13:34:99:464,0,841	0/1:21,4:25:99:115,0,747	0/0:57,0:56:99:0,129,2479	0/1:24,8:32:99:215,0,756	0/0:26,0:26:78.25:0,78,1356	0/0:22,0:22:57.19:0,57,1001	0/1:17,11:28:99:344,0,538	0/1:23,16:39:99:496,0,994	0/0:17,0:17:42.14:0,42,766	0/1:36,20:55:99:756,0,1180	0/0:34,0:33:96.32:0,96,1729	0/0:33,0:33:87.23:0,87,1561	0/0:19,0:19:54.11:0,54,884	0/0:30,0:29:77.47:0,77,1257	0/0:37,0:37:93.10:0,93,1474	0/0:13,1:14:18.06:0,18,327	0/1:24,10:34:99:329,0,901	0/1:19,9:28:99:262,0,553	0/1:11,3:14:11.94:12,0,251	0/0:40,0:40:99:0,120,2141	0/0:40,0:40:99:0,114,2059	0/0:42,0:42:99:0,99,1626	0/0:17,0:17:48.16:0,48,879
chr10	50871271	.	A	ATATATGTG	16164.85	PASS	AC=30;AF=0.556;AN=54;BaseQRankSum=5.384;DP=767;FS=23.386;HRun=0;HaplotypeScore=233.8765;InbreedingCoeff=0.9489;MQ=56.47;MQ0=3;MQRankSum=-6.940;QD=37.33;ReadPosRankSum=-4.899;VQSLOD=2.5881;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:25:2.14:103,2,0	1/1:13,6:19:29.94:862,30,0	0/0:26,0:14:10.49:0,10,375	0/0:24,0:11:20.59:0,21,231	0/0:31,0:31:87.26:0,87,2128	1/1:12,10:22:32.40:900,32,0	1/1:20,2:22:35.39:839,35,0	1/1:56,0:55:99:2366,114,0	1/1:15,7:22:45.14:1381,45,0	0/0:25,0:25:66.23:0,66,1759	0/0:24,0:24:57.15:0,57,1347	1/1:13,9:22:27.09:826,27,0	1/1:22,8:31:35.80:977,36,0	0/0:22,0:22:51.18:0,51,1340	1/1:35,14:48:71.05:2189,71,0	0/0:32,0:32:84.15:0,84,1898	0/0:21,0:22:41.11:0,41,993	0/0:14,0:15:36.07:0,36,792	1/1:21,0:16:33.05:608,33,0	1/1:6,29:41:29.22:1000,29,0	./.	1/1:15,11:26:47.68:1276,48,0	1/1:20,9:29:42.11:1190,42,0	1/1:11,2:13:5.84:148,6,0	0/0:37,0:37:99:0,99,2368	0/0:40,0:40:99:0,117,2797	1/1:25,10:35:60.08:1501,60,0	0/0:10,0:10:30.08:0,30,704
chr10	50871279	.	G	GTA	3051.19	PASS	AB=0.948;AC=16;AF=0.296;AN=54;BaseQRankSum=11.773;DP=756;FS=10.179;HRun=0;HaplotypeScore=208.1061;InbreedingCoeff=-0.2665;MQ=56.39;MQ0=2;MQRankSum=-8.069;QD=7.26;ReadPosRankSum=-5.858;VQSLOD=1.0232;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:18,3:21:3.22:3,0,37	0/1:17,0:17:80.89:143,0,81	0/0:23,0:11:11.88:0,12,240	0/0:25,0:13:10.86:0,11,231	0/0:32,0:32:93.30:0,93,1310	0/1:19,2:21:9.71:207,0,10	0/1:21,1:22:99:205,0,128	0/1:52,3:54:99:517,0,656	0/1:21,0:21:67.11:224,0,67	0/0:26,0:26:75.22:0,75,1037	0/0:22,0:22:63.20:0,63,881	0/1:21,2:23:22.32:124,0,22	0/1:32,3:35:99:263,0,122	0/0:20,0:20:51.17:0,51,723	0/1:44,3:47:93.63:321,0,94	0/0:30,0:30:84.22:0,84,1143	0/0:26,0:26:60.76:0,61,781	0/0:16,0:16:42.06:0,42,546	0/1:20,2:19:99:150,0,243	0/1:39,0:39:23.85:233,0,24	./.	0/1:23,0:23:95.85:245,0,96	0/1:29,2:31:99:152,0,120	1/1:10,0:10:2.98:44,3,0	0/0:40,0:40:99:0,114,1553	0/0:41,0:41:99:0,123,1683	0/1:31,2:33:99:375,0,190	0/0:14,0:14:42.14:0,42,593
chr10	50871439	.	AGAGGGG	A	389.14	PASS	AB=0.968;AC=9;AF=0.161;AN=56;BaseQRankSum=7.183;DP=448;FS=53.695;HRun=0;HaplotypeScore=107.1454;InbreedingCoeff=-0.0136;MQ=57.44;MQ0=23;MQRankSum=-4.746;QD=2.74;ReadPosRankSum=-1.719;VQSLOD=-0.6153;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:15,0:15:93.27:93,0,229	0/0:6,0:5:15.05:0,15,267	0/0:13,0:5:12.03:0,12,184	0/0:29,0:17:2.12:0,2,123	0/0:23,0:22:57.13:0,57,900	0/1:6,4:10:21.92:22,0,185	0/0:12,0:11:24.06:0,24,313	0/1:29,0:26:10.17:19,0,10	0/0:8,0:8:6.45:0,6,61	0/0:19,0:17:51.17:0,51,1035	0/0:17,0:17:44.36:0,44,744	0/1:4,0:4:3.89:4,0,71	0/1:16,0:16:45.79:46,0,144	0/0:18,0:18:51:0,51,938	0/0:13,0:11:11.40:0,11,183	0/0:18,0:18:42.11:0,42,844	0/0:20,0:18:40.36:0,40,876	0/0:5,0:5:12.04:0,12,178	0/1:13,0:10:4.17:89,0,4	0/1:19,0:19:5.93:169,0,6	0/1:15,0:13:3.76:19,0,4	0/0:17,0:15:12.04:0,12,189	0/0:28,0:28:47.92:0,48,697	0/0:5,0:5:15.05:0,15,209	0/0:17,0:16:47.30:0,47,840	0/0:27,0:26:71.37:0,71,1352	0/1:21,0:21:11.68:63,0,12	0/0:11,0:10:24.06:0,24,435
chr10	50871443	.	GGGGAGAGAGAGAGAGA	G	2250.53	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=0.124;DP=436;FS=19.483;HRun=0;HaplotypeScore=160.1867;InbreedingCoeff=0.4320;MQ=55.56;MQ0=24;MQRankSum=-2.370;QD=15.21;ReadPosRankSum=-1.058;VQSLOD=1.4935;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:13,0:13:92.29:92,0,113	0/0:6,0:5:15.01:0,15,161	0/0:13,0:5:8.98:0,9,79	0/0:25,0:13:8.99:0,9,76	0/0:23,0:22:47.08:0,47,935	0/0:10,0:10:10.35:0,10,89	0/0:10,0:9:4.81:0,5,127	1/1:27,0:24:61.75:521,62,0	0/0:7,0:7:2.16:0,2,19	0/0:20,0:18:54.05:0,54,1679	0/0:19,0:19:47.67:0,48,873	0/1:5,0:4:30.97:103,0,31	0/1:16,0:16:79.78:237,0,80	0/0:18,0:18:51.09:0,51,1443	0/1:14,0:12:96.45:96,0,101	0/0:17,0:17:49.93:0,50,1218	0/0:20,0:18:25.28:0,25,1666	0/0:5,0:5:12.80:0,13,92	1/1:14,0:11:29.69:455,30,0	1/1:17,1:18:32.78:424,33,0	1/1:16,0:14:3.95:154,4,0	0/0:16,0:14:11.93:0,12,93	0/0:26,0:26:41.13:0,41,347	0/1:6,0:6:27.12:27,0,87	0/0:17,0:16:45.02:0,45,1362	0/0:26,0:25:75.10:0,75,2244	1/1:0,19:19:11.89:319,12,0	0/0:10,0:9:21.04:0,21,596
chr10	50871445	.	GGAGAGAGAGAGAGA	G	1453.26	PASS	AC=24;AF=0.500;AN=48;BaseQRankSum=4.383;DP=430;FS=47.229;HRun=0;HaplotypeScore=147.5589;InbreedingCoeff=0.6546;MQ=54.89;MQ0=25;MQRankSum=-5.130;QD=9.50;ReadPosRankSum=-2.576;VQSLOD=0.5063;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,2:11:8.71:232,9,0	./.	./.	./.	0/0:19,0:18:12.04:0,12,438	1/1:10,0:10:2.99:23,3,0	1/1:10,0:9:2.99:24,3,0	0/0:27,0:24:0.47:0,0,1	1/1:1,5:6:2.85:50,3,0	0/0:21,0:19:24.55:0,25,1199	0/0:19,0:18:15.05:0,15,432	1/1:5,0:5:6.02:186,6,0	1/1:7,9:16:11.98:402,12,0	0/0:19,0:20:27.09:0,27,1076	1/1:10,0:11:3.01:98,3,0	0/0:16,0:18:18.06:0,18,818	0/0:21,0:19:33.10:0,33,1489	0/0:5,0:5:0.89:0,1,2	1/1:13,0:11:8.90:185,9,0	1/1:16,0:16:1.89:115,2,0	0/0:16,0:14:6.02:0,6,86	./.	1/1:22,5:27:2.94:18,3,0	1/1:6,0:6:3.01:84,3,0	0/0:17,0:17:24.06:0,24,953	0/0:25,0:25:36.12:0,36,1762	1/1:19,0:19:6.02:200,6,0	0/0:10,0:9:12.04:0,12,397
chr10	50873729	.	T	TTC	8534.16	PASS	AB=0.615;AC=21;AF=0.375;AN=56;BaseQRankSum=4.407;DP=665;FS=1.104;HRun=0;HaplotypeScore=113.6566;InbreedingCoeff=0.9375;MQ=65.29;MQ0=5;MQRankSum=-3.723;QD=36.32;ReadPosRankSum=2.616;VQSLOD=7.1572;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,23:31:43.09:966,43,0	1/1:4,5:9:24.04:334,24,0	0/0:31,0:21:22.78:0,23,254	0/0:30,0:15:26.29:0,26,300	0/0:19,0:19:51.16:0,51,636	1/1:5,25:30:69.24:1165,69,0	0/1:6,10:16:6.22:402,0,6	0/0:32,0:32:62.95:0,63,746	1/1:5,16:21:45.15:752,45,0	0/0:36,0:36:99:0,99,1239	0/0:18,0:18:48.12:0,48,575	1/1:3,18:21:51.16:848,51,0	1/1:4,27:31:69.24:1160,69,0	0/0:26,0:26:60.17:0,60,739	1/1:1,28:29:78.27:1290,78,0	0/0:20,0:20:51.16:0,51,649	0/0:25,0:25:62.41:0,62,768	0/0:28,0:28:78.23:0,78,969	0/0:23,0:23:48.15:0,48,609	0/0:31,0:31:81.23:0,81,1003	0/0:19,0:19:33.11:0,33,420	1/1:7,8:15:36.12:576,36,0	1/1:7,9:16:39.11:591,39,0	1/1:5,11:16:26.66:451,27,0	0/0:16,0:16:36.11:0,36,447	0/0:22,0:22:57.18:0,57,725	0/0:37,0:37:81.26:0,81,1030	0/0:17,0:17:30.10:0,30,382
chr10	50873753	.	CTCTT	C	3019.36	PASS	AB=0.894;AC=14;AF=0.259;AN=54;BaseQRankSum=1.002;DP=616;FS=2.168;HRun=0;HaplotypeScore=157.7791;InbreedingCoeff=0.7733;MQ=54.28;MQ0=8;MQRankSum=3.956;QD=16.68;ReadPosRankSum=0.333;VQSLOD=3.5866;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:24.40:0,24,275	0/0:9,0:9:18.05:0,18,270	1/1:18,0:8:2.04:6,2,0	./.	0/0:27,0:27:72.23:0,72,1532	0/0:22,0:22:40.04:0,40,554	0/0:16,0:16:14.50:0,15,214	1/1:12,21:33:60.06:733,60,0	0/0:16,0:16:24.01:0,24,379	0/0:39,0:38:84.28:0,84,1836	0/0:22,0:22:6.42:0,6,1068	0/0:22,0:22:46.52:0,47,658	0/0:30,0:30:62.17:0,62,885	0/0:19,0:19:39.11:0,39,806	0/0:30,0:30:51.08:0,51,747	0/1:14,2:16:28.20:28,0,397	0/0:28,0:28:57.05:0,57,1272	0/0:29,0:29:63.11:0,63,1365	1/1:7,10:16:27.01:318,27,0	1/1:7,23:30:60.07:876,60,0	1/1:4,9:13:12.04:197,12,0	0/0:18,0:18:36.18:0,36,482	0/0:20,0:20:34.89:0,35,544	0/0:14,0:14:12.40:0,12,154	0/1:16,2:18:1.11:1,0,984	0/0:21,0:21:54.18:0,54,1167	1/1:6,30:36:63.22:1035,63,0	0/0:11,0:11:21.07:0,21,438
chr10	50873761	.	T	TTCTC	11029.18	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=2.143;DP=586;FS=0.000;HRun=0;HaplotypeScore=122.5574;InbreedingCoeff=0.9260;MQ=53.20;MQ0=8;MQRankSum=-3.799;QD=49.46;ReadPosRankSum=-0.280;VQSLOD=4.9497;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,8:18:47.94:850,48,0	1/1:3,9:12:23.98:497,24,0	0/0:14,0:4:3.01:0,3,30	0/1:16,0:4:0.88:1,0,15	0/0:28,0:28:81.23:0,81,1353	1/1:12,8:20:51.12:1053,51,0	1/1:10,6:16:17.88:565,18,0	0/0:29,0:29:56.14:0,56,444	1/1:8,6:14:42.09:821,42,0	0/0:35,0:34:99:0,99,1675	0/0:20,0:20:52.98:0,53,934	1/1:14,8:22:63.17:1321,63,0	1/1:13,15:28:81.20:1752,81,0	0/0:22,0:22:63.10:0,63,878	1/1:18,13:31:93.20:1841,93,0	0/0:16,0:16:39.09:0,39,533	0/0:29,0:29:78.02:0,78,1187	0/0:28,0:28:81.15:0,81,1320	0/0:16,0:15:41.96:0,42,376	0/0:28,0:28:71.91:0,72,664	0/0:12,0:12:15.03:0,15,157	1/1:4,12:16:45.11:915,45,0	1/1:4,14:18:42.12:991,42,0	1/1:9,3:12:11.09:421,11,0	0/0:19,0:19:54.17:0,54,930	0/0:20,0:20:60.18:0,60,1045	0/0:36,0:36:81.12:0,81,834	0/0:11,0:11:24.04:0,24,414
chr10	50874554	.	CAAAA	C	5528.75	PASS	AB=0.589;AC=29;AF=0.518;AN=56;BaseQRankSum=13.042;DP=531;FS=3.330;HRun=15;HaplotypeScore=114.3974;InbreedingCoeff=0.7434;MQ=65.28;MQ0=0;MQRankSum=-4.964;QD=18.87;ReadPosRankSum=8.129;VQSLOD=2.9802;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,25:32:56.94:776,57,0	1/1:2,3:5:5.93:82,6,0	0/0:17,0:12:26.94:0,27,362	0/0:20,0:14:18.04:0,18,269	0/0:22,0:25:66.21:0,66,1328	1/1:5,15:21:48.01:636,48,0	1/1:2,8:11:21.03:269,21,0	0/1:10,0:23:8.64:9,0,46	1/1:2,10:12:27.05:368,27,0	0/0:28,0:33:81.26:0,81,1513	0/0:14,0:14:27.06:0,27,563	1/1:3,11:14:27.02:368,27,0	1/1:5,10:17:28.22:354,28,0	0/0:22,0:23:54.16:0,54,1064	1/1:5,23:29:75.11:1004,75,0	0/0:12,0:12:36.12:0,36,783	0/0:21,0:24:54.48:0,54,987	0/0:13,0:15:36.12:0,36,752	0/1:5,0:15:11.25:11,0,26	0/1:3,1:27:57.54:58,0,70	1/1:4,0:16:7.38:19,7,0	1/1:2,16:18:42.04:571,42,0	1/1:1,14:15:36.11:490,36,0	1/1:2,12:14:36.09:490,36,0	0/0:14,0:15:42.14:0,42,937	0/0:20,0:20:51.16:0,51,1036	1/1:11,0:24:1.84:24,2,0	0/0:16,0:20:39.13:0,39,811
chr10	50875129	.	TTGTGTG	T	1074.49	PASS	AB=1.000;AC=23;AF=0.605;AN=38;BaseQRankSum=-1.142;DP=493;FS=0.000;HRun=0;HaplotypeScore=97.9174;InbreedingCoeff=0.2409;MQ=65.07;MQ0=20;MQRankSum=-0.071;QD=4.37;ReadPosRankSum=1.102;VQSLOD=1.6469;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:4,0:4:6.02:0,6,93	./.	./.	1/1:12,2:14:5.93:40,6,0	1/1:24,0:23:14.07:174,14,0	1/1:18,2:17:3.01:49,3,0	0/0:32,0:31:0.89:0,1,2	1/1:14,1:16:7.53:77,8,0	0/0:15,0:14:0:0,0,0	./.	1/1:18,0:17:8.76:153,9,0	1/1:6,4:10:1.47:57,1,0	0/1:13,0:12:29.90:30,0,37	0/1:19,0:18:39.84:89,0,40	0/0:15,0:14:2.32:0,2,42	0/1:28,0:23:79.65:80,0,128	0/0:13,0:13:6.83:0,7,40	1/1:22,0:22:3.01:42,3,0	./.	./.	./.	1/1:13,2:15:2.88:59,3,0	1/1:30,0:30:20.55:266,21,0	./.	./.	1/1:10,0:16:5.70:83,6,0	0/0:8,0:8:5.52:0,6,33
chr10	50877673	.	ACAATCTTGAGG	A	22080.30	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=19.196;DP=682;FS=2.173;HRun=0;HaplotypeScore=238.3402;InbreedingCoeff=0.9662;MQ=89.45;MQ0=1;MQRankSum=-19.528;QD=78.58;ReadPosRankSum=4.172;VQSLOD=4.8208;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,18:23:51.17:1763,51,0	1/1:2,7:8:15.05:535,15,0	0/0:38,0:38:75.79:0,76,4746	0/0:23,0:23:66.23:0,66,3171	0/0:23,0:22:69.24:0,69,3834	1/1:2,17:19:51.18:1799,51,0	1/1:2,22:24:60.21:2122,60,0	0/0:22,0:22:63.22:0,63,3165	1/1:3,27:30:63.22:2247,63,0	0/0:23,0:23:69.24:0,69,3569	0/0:18,0:18:54.17:0,54,2825	1/1:3,31:34:93.32:3317,93,0	1/1:5,34:39:89.97:3208,90,0	0/0:35,1:36:1.35:0,1,5726	1/1:0,28:28:72.25:2568,72,0	0/0:26,0:26:78.27:0,78,4307	0/0:18,0:18:54.19:0,54,2897	0/0:18,0:18:54.18:0,54,2809	0/0:27,0:27:81.28:0,81,4179	0/0:20,0:20:57.20:0,57,3049	0/0:23,0:22:63.22:0,63,3550	1/1:4,22:26:57.20:2033,57,0	1/1:4,21:19:33.11:1177,33,0	1/1:3,21:24:42.61:1311,43,0	0/0:26,0:26:75.26:0,75,4093	0/0:19,0:19:57.20:0,57,3108	0/0:27,0:27:81.28:0,81,4585	0/0:14,0:14:42.14:0,42,2424
chr10	50878167	.	TTC	T	182.51	PASS	AB=0.935;AC=16;AF=0.333;AN=48;BaseQRankSum=4.288;DP=609;FS=3.389;HRun=0;HaplotypeScore=93.6023;InbreedingCoeff=-0.0534;MQ=64.98;MQ0=13;MQRankSum=-0.627;QD=0.58;ReadPosRankSum=-0.611;VQSLOD=1.2386;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:31:17.54:18,0,23	./.	0/1:56,0:28:0:0,0,0	./.	0/1:20,1:21:18.11:18,0,160	0/1:19,0:18:5.65:6,0,7	0/0:20,0:18:6.15:0,6,37	0/0:35,0:24:3.01:0,3,34	0/0:16,0:15:2.60:0,3,10	0/1:25,4:27:58.30:58,0,237	0/0:13,2:14:9.02:0,9,108	1/1:20,0:19:5.68:28,6,0	1/1:14,0:12:5.54:25,6,0	0/1:16,1:17:16.51:17,0,148	0/1:19,0:19:12.46:12,0,30	0/1:16,5:22:77.55:78,0,299	0/1:17,4:21:27.19:27,0,458	0/0:18,0:18:14.41:0,14,223	0/0:15,0:11:8.92:0,9,89	0/0:19,0:18:1.25:0,1,3	./.	0/0:17,0:17:2.90:0,3,16	./.	1/1:25,0:22:2.84:14,3,0	0/0:12,0:17:3:0,3,26	0/1:16,1:17:17.32:17,0,138	0/0:28,0:25:21.27:0,21,164	0/0:16,0:16:14.82:0,15,128
chr10	50878199	.	CTCTCTCTGTCTCTG	C	1015.70	PASS	AB=0.996;AC=15;AF=0.268;AN=56;BaseQRankSum=2.932;DP=576;FS=0.770;HRun=0;HaplotypeScore=160.9291;InbreedingCoeff=0.2267;MQ=52.21;MQ0=17;MQRankSum=-2.454;QD=5.13;ReadPosRankSum=-0.715;VQSLOD=2.6812;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:38,1:37:36.37:256,0,36	0/1:3,0:3:34.87:35,0,40	0/0:50,0:14:25.19:0,25,360	0/0:66,0:17:26.63:0,27,328	0/0:23,0:23:31.46:0,31,1498	0/1:22,0:21:10.19:63,0,10	0/1:19,0:17:93.80:180,0,94	0/0:35,0:22:54.90:0,55,1496	1/1:11,0:10:8.72:67,9,0	0/0:20,0:19:40.08:0,40,1901	0/0:14,0:13:15.05:0,15,728	1/1:16,1:16:8.98:273,9,0	0/1:10,0:8:16.91:123,0,17	0/0:11,0:11:25.64:0,26,1210	0/1:21,0:20:40.53:41,0,328	0/0:26,0:26:67.11:0,67,2954	0/0:25,0:25:57.20:0,57,2926	0/0:17,0:17:3.36:0,3,1167	0/0:20,0:11:29.97:0,30,809	0/1:20,0:19:1.97:2,0,273	0/0:10,0:8:8.99:0,9,121	0/0:11,0:11:3.73:0,4,16	1/1:11,0:11:2.49:9,2,0	1/1:23,2:22:3:125,3,0	0/0:8,0:7:6.02:0,6,262	0/0:10,0:10:27.98:0,28,1139	0/0:17,0:14:34.93:0,35,1284	0/0:14,0:14:19:0,19,559
chr10	50878201	.	CTCTCTGTCTCTG	C	1387.49	PASS	AB=0.952;AC=18;AF=0.321;AN=56;BaseQRankSum=2.966;DP=566;FS=3.443;HRun=0;HaplotypeScore=148.8173;InbreedingCoeff=0.4388;MQ=50.52;MQ0=16;MQRankSum=-1.791;QD=6.74;ReadPosRankSum=-1.266;VQSLOD=2.4750;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,23:35:14.98:226,15,0	0/1:3,0:3:12.47:35,0,12	0/0:50,0:14:31.16:0,31,447	0/0:64,0:17:29.53:0,30,357	0/0:21,0:21:31.46:0,31,1302	1/1:23,0:22:8.65:161,9,0	0/1:19,0:17:3.26:285,0,3	0/0:35,0:22:59.94:0,60,1435	1/1:5,6:10:3.90:38,4,0	0/0:19,0:18:42.14:0,42,1680	0/0:14,0:13:15.05:0,15,620	1/1:5,12:16:8.98:271,9,0	0/1:5,4:8:16.94:211,0,17	0/0:12,0:12:30:0,30,1073	0/1:21,0:20:99:167,0,115	0/0:26,0:26:67.11:0,67,2543	0/0:24,0:24:57.20:0,57,2517	0/0:17,0:17:3.36:0,3,1026	0/0:20,0:11:29.93:0,30,719	0/1:19,0:18:2.58:3,0,262	0/0:10,0:8:8.99:0,9,121	0/1:10,0:10:1.86:14,0,2	1/1:3,8:11:3.01:54,3,0	1/1:8,17:22:2.89:92,3,0	0/0:8,0:7:6.02:0,6,210	0/0:10,0:10:27.09:0,27,972	0/0:17,0:14:34.65:0,35,1053	0/0:13,0:13:8.96:0,9,379
chr10	50878203	.	CTCTGTCTCTG	C	1518.25	PASS	AB=1.000;AC=20;AF=0.357;AN=56;BaseQRankSum=3.197;DP=553;FS=0.612;HRun=0;HaplotypeScore=136.9621;InbreedingCoeff=0.6629;MQ=50.92;MQ0=16;MQRankSum=-2.720;QD=7.99;ReadPosRankSum=-0.653;VQSLOD=2.2186;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:32:14.74:189,15,0	1/1:4,0:4:8.39:88,8,0	0/0:48,0:15:37.16:0,37,518	0/0:66,0:20:35.05:0,35,425	0/0:21,0:21:31.46:0,31,1107	1/1:6,17:22:11.79:209,12,0	1/1:19,0:17:16.49:408,16,0	0/0:33,0:21:34.60:0,35,1201	1/1:11,0:10:4.83:41,5,0	0/0:17,0:16:42.14:0,42,1452	0/0:14,0:13:15:0,15,527	1/1:16,0:15:8.98:210,9,0	0/1:8,0:7:16.78:145,0,17	0/0:12,0:12:30:0,30,928	1/1:20,0:19:4.80:298,5,0	0/0:26,0:26:66.69:0,67,2250	0/0:24,0:24:57.20:0,57,2202	0/0:17,0:17:3.36:0,3,931	0/0:21,0:13:35.95:0,36,726	0/1:19,0:18:2.97:3,0,257	0/0:10,0:8:8.99:0,9,121	0/0:8,0:8:2.30:0,2,7	1/1:10,0:11:3.01:34,3,0	1/1:23,0:21:2.98:78,3,0	0/0:7,0:6:5.93:0,6,155	0/0:9,0:9:27.09:0,27,885	0/0:17,0:14:34.22:0,34,838	0/0:13,0:13:8.39:0,8,328
chr10	50878205	.	CTG	C	722.85	PASS	AB=1.000;AC=24;AF=0.429;AN=56;BaseQRankSum=6.616;DP=532;FS=4.889;HRun=0;HaplotypeScore=95.0465;InbreedingCoeff=0.4191;MQ=51.12;MQ0=14;MQRankSum=-2.020;QD=3.20;ReadPosRankSum=0.058;VQSLOD=1.6603;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:32,0:31:12.73:60,13,0	1/1:4,0:4:8.93:65,9,0	0/0:49,0:17:14.85:0,15,282	0/0:64,0:19:8.56:0,9,150	0/0:18,1:19:20.24:0,20,302	1/1:20,0:20:6.32:35,6,0	1/1:15,1:14:32.08:243,32,0	0/0:33,0:21:37.73:0,38,449	1/1:10,0:9:4.76:23,5,0	0/1:17,0:16:12.45:12,0,360	0/0:14,0:13:14.91:0,15,166	1/1:15,0:15:8.36:46,8,0	0/1:8,0:6:8.78:20,0,9	0/1:12,0:12:9.65:10,0,245	1/1:14,4:17:39.41:324,39,0	0/0:28,0:28:41.55:0,42,674	0/0:24,0:24:31.99:0,32,701	0/0:17,0:17:7.55:0,8,344	0/0:21,0:13:26.84:0,27,292	0/1:19,0:18:4.71:5,0,103	0/0:9,0:8:6:0,6,51	0/0:8,0:8:2.03:0,2,6	1/1:10,0:10:2.92:17,3,0	1/1:21,0:19:2.84:15,3,0	0/1:4,0:3:11.97:12,0,25	0/0:9,0:9:14.31:0,14,248	0/1:16,0:13:23.47:23,0,150	0/0:11,0:11:5.87:0,6,104
chr10	50878281	.	CACAT	C	848.97	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=-0.090;DP=503;FS=23.811;HRun=0;HaplotypeScore=106.4814;InbreedingCoeff=0.0862;MQ=58.87;MQ0=14;MQRankSum=1.163;QD=4.06;ReadPosRankSum=0.624;VQSLOD=0.5976;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:25:72:72,0,83	1/1:9,1:10:11.90:99,12,0	0/0:24,0:16:48.05:0,48,492	0/0:22,0:14:42:0,42,430	0/0:15,0:14:26.96:0,27,224	0/1:27,0:26:74.94:75,0,263	0/1:30,0:29:99:233,0,129	0/0:22,0:21:63.02:0,63,710	0/1:9,0:9:3.10:3,0,148	0/0:24,0:22:62.79:0,63,763	0/0:10,0:10:20.89:0,21,221	0/1:15,0:15:34.11:39,0,34	0/1:20,0:20:79.01:79,0,249	0/0:18,0:18:38.75:0,39,568	1/1:9,18:25:11.16:190,11,0	0/0:17,0:16:48.06:0,48,807	0/0:23,0:23:31.77:0,32,662	0/0:16,0:16:44.92:0,45,504	0/0:13,0:13:32.45:0,32,338	0/0:14,0:13:26.82:0,27,254	0/0:19,0:19:29.69:0,30,225	0/1:14,0:14:79.88:80,0,103	0/1:11,0:11:44.93:45,0,68	0/1:21,0:20:93.19:93,0,137	0/0:12,0:10:20.85:0,21,164	0/0:24,0:23:65.95:0,66,798	0/0:8,0:8:11.86:0,12,178	0/0:13,0:12:9.67:0,10,168
chr10	50878283	.	CAT	C	1139.96	PASS	AB=1.000;AC=14;AF=0.250;AN=56;BaseQRankSum=0.792;DP=483;FS=9.168;HRun=0;HaplotypeScore=87.1918;InbreedingCoeff=0.2829;MQ=60.74;MQ0=10;MQRankSum=0.451;QD=5.67;ReadPosRankSum=1.892;VQSLOD=2.0424;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:24:17.94:74,0,18	1/1:1,9:10:20.42:196,20,0	0/0:24,0:16:48.05:0,48,492	0/0:23,0:15:45:0,45,457	0/0:15,0:15:10:0,10,153	0/1:26,0:26:64.83:79,0,65	1/1:29,1:29:17.74:303,18,0	0/0:21,0:20:59.61:0,60,530	0/1:9,0:9:36.25:43,0,36	0/0:22,0:21:59.76:0,60,602	0/0:9,0:9:20.89:0,21,197	0/1:15,0:15:7.37:40,0,7	0/1:20,0:20:90.84:122,0,91	0/0:17,0:17:38.90:0,39,445	1/1:19,3:20:15.03:181,15,0	0/0:16,0:15:33.56:0,34,516	0/0:22,0:22:37.22:0,37,460	0/0:14,0:14:25.81:0,26,313	0/0:14,0:14:34.46:0,34,255	0/0:13,0:12:26.83:0,27,228	0/0:18,0:18:29.69:0,30,225	0/1:14,0:14:25.03:81,0,25	0/1:11,0:11:3.43:72,0,3	0/1:20,0:19:28.47:122,0,28	0/0:11,0:11:23.85:0,24,189	0/0:24,0:23:51.72:0,52,612	0/0:8,0:8:11.80:0,12,141	0/0:11,0:10:26.64:0,27,197
chr10	50878434	.	TTGTGTGTGAGTGTATG	T	1088.74	PASS	AB=1.000;AC=19;AF=0.365;AN=52;BaseQRankSum=-1.879;DP=487;FS=6.639;HRun=0;HaplotypeScore=230.3148;InbreedingCoeff=-0.1279;MQ=61.75;MQ0=8;MQRankSum=0.273;QD=3.70;ReadPosRankSum=-4.332;VQSLOD=1.0798;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:6.45:0,6,113	1/1:11,0:11:12.47:106,12,0	0/1:37,0:16:1.86:2,0,177	0/1:42,0:17:59.48:59,0,378	0/0:24,0:24:2.65:0,3,1028	0/0:12,0:12:9.03:0,9,281	0/1:12,0:13:0:0,0,0	1/1:5,11:15:36.10:617,36,0	0/0:4,0:4:3.01:0,3,99	0/0:21,0:21:51.68:0,52,1791	0/0:16,0:16:17.99:0,18,574	0/1:10,0:10:10.51:11,0,113	0/1:13,0:13:20.36:20,0,219	0/0:13,0:13:8.66:0,9,267	0/0:12,0:12:3.01:0,3,100	0/1:17,0:17:37.24:37,0,285	0/1:20,0:20:6.32:6,0,581	0/0:19,0:19:4.93:0,5,840	0/1:14,0:14:99:205,0,108	0/1:19,0:18:49.08:49,0,368	0/1:12,0:12:22.52:23,0,110	1/1:19,0:17:2.95:19,3,0	./.	./.	0/0:27,0:27:10.57:0,11,1120	0/1:19,0:19:20.21:20,0,1616	0/1:12,0:12:43.82:44,0,362	0/1:20,0:20:19.07:19,0,1662
chr10	50878441	.	TGA	T	1980.05	PASS	AB=0.851;AC=35;AF=0.625;AN=56;BaseQRankSum=4.821;DP=460;FS=21.522;HRun=0;HaplotypeScore=141.9544;InbreedingCoeff=0.3316;MQ=57.22;MQ0=10;MQRankSum=-3.074;QD=5.88;ReadPosRankSum=-3.346;VQSLOD=1.4000;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:3,8:13:5.75:37,0,6	1/1:3,8:11:8.97:71,9,0	0/1:34,0:13:1.19:1,0,142	0/0:41,0:16:8.67:0,9,254	0/1:24,0:24:6.87:7,0,308	1/1:0,12:12:8.82:123,9,0	0/1:1,11:13:0:0,0,0	1/1:15,1:14:41.83:370,42,0	1/1:2,1:3:3.01:43,3,0	0/0:21,0:21:37.21:0,37,400	0/0:15,0:14:17.87:0,18,143	1/1:3,6:9:12:148,12,0	1/1:0,12:12:17.98:226,18,0	0/1:13,0:13:8.19:8,0,67	1/1:1,11:12:3.01:43,3,0	0/1:13,0:12:7.05:7,0,101	0/1:20,0:20:39.05:39,0,216	0/1:19,0:19:10.10:10,0,333	1/1:0,10:10:26.98:322,27,0	1/1:1,19:19:20.36:297,20,0	1/1:3,9:12:6.49:86,6,0	1/1:6,11:15:2.96:19,3,0	0/1:10,4:14:0:0,0,0	0/1:0,12:13:0.05:0,0,0	0/0:28,0:28:47.84:0,48,395	0/1:18,0:18:2.57:3,0,273	1/1:0,9:9:21.07:287,21,0	0/0:18,0:18:18.76:0,19,313
chr10	50878480	.	GTA	G	56.50	PASS	AB=0.847;AC=16;AF=0.333;AN=48;BaseQRankSum=5.674;DP=395;FS=3.380;HRun=0;HaplotypeScore=121.3164;InbreedingCoeff=0.5785;MQ=32.93;MQ0=15;MQRankSum=-2.658;QD=0.50;ReadPosRankSum=2.296;VQSLOD=2.0639;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,3:12:6.44:32,6,0	1/1:4,5:8:2.91:19,3,0	./.	0/0:17,0:5:6.02:0,6,112	0/0:19,0:19:9.50:0,10,146	1/1:10,5:15:11.13:52,11,0	0/1:10,5:15:0:0,0,1	0/0:26,0:23:61.82:0,62,678	1/1:5,3:8:2.39:11,2,0	0/0:18,0:18:44.79:0,45,749	0/0:18,0:18:9.03:0,9,153	1/1:10,3:12:5.15:29,5,0	1/1:8,4:12:5.03:31,5,0	0/0:17,0:17:5.81:0,6,57	1/1:8,4:12:2.74:12,3,0	0/0:8,0:8:3.01:0,3,58	0/1:16,1:17:16.85:17,0,234	0/0:13,0:13:28.92:0,29,307	0/0:16,0:14:23.35:0,23,462	0/0:17,0:17:17.86:0,18,223	0/0:10,0:9:6.02:0,6,74	./.	./.	./.	0/0:17,0:17:8.53:0,9,169	0/0:18,1:18:25.25:0,25,635	0/0:6,0:6:17.84:0,18,192	0/0:12,0:12:32.37:0,32,446
chr10	50878483	.	TGA	T	168.95	PASS	AB=0.968;AC=24;AF=0.444;AN=54;BaseQRankSum=3.887;DP=377;FS=2.664;HRun=0;HaplotypeScore=119.6274;InbreedingCoeff=0.0883;MQ=32.29;MQ0=14;MQRankSum=-1.261;QD=0.70;ReadPosRankSum=-1.696;VQSLOD=1.6710;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:12,1:12:10:10,0,10	1/1:8,1:8:2.89:18,3,0	./.	0/0:14,0:2:6.01:0,6,72	0/1:18,0:18:3.77:4,0,33	1/1:13,2:15:9.82:44,10,0	0/1:13,2:15:0.01:0,0,0	0/1:24,0:21:18.68:19,0,299	1/1:8,0:8:2.66:13,3,0	0/1:18,0:18:23.57:24,0,270	0/0:18,0:18:5.93:0,6,54	1/1:11,1:11:5.79:38,6,0	1/1:12,0:12:11.30:51,11,0	0/0:17,0:17:2.94:0,3,12	1/1:10,1:11:2.80:13,3,0	0/0:8,0:8:3:0,3,26	0/1:17,0:17:12.78:13,0,74	0/0:13,0:13:2.23:0,2,145	0/1:15,0:14:22.18:22,0,203	0/1:17,0:17:31.89:32,0,59	0/0:11,0:10:2.95:0,3,20	0/1:8,1:9:0:0,0,0	0/1:12,0:12:0:0,0,0	0/1:8,1:9:0:0,0,0	0/0:15,0:15:8.59:0,9,69	0/0:19,0:18:8.32:0,8,295	0/0:5,0:5:12.02:0,12,116	0/1:9,0:9:9.89:10,0,142
chr10	50878492	.	GTA	G	31.83	PASS	AC=14;AF=0.304;AN=46;BaseQRankSum=5.761;DP=353;FS=0.000;HRun=0;HaplotypeScore=106.6541;InbreedingCoeff=0.5904;MQ=31.79;MQ0=11;MQRankSum=-1.346;QD=0.48;ReadPosRankSum=0.447;VQSLOD=1.9030;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:11:3.58:16,4,0	1/1:7,1:8:2.83:15,3,0	./.	./.	0/0:17,0:17:1.21:0,1,65	1/1:10,2:12:8.34:38,8,0	0/0:13,2:15:0:0,0,1	0/0:19,0:18:51.01:0,51,638	1/1:7,0:7:2.39:11,2,0	0/0:19,0:19:30.11:0,30,588	0/0:19,0:19:6.02:0,6,97	1/1:8,1:8:5.23:37,5,0	1/1:9,0:9:9.24:41,9,0	0/0:18,0:18:3.84:0,4,15	1/1:9,1:10:2.74:12,3,0	0/0:9,0:9:3.01:0,3,49	0/0:17,0:17:19.10:0,19,231	0/0:11,0:11:27.04:0,27,415	0/0:13,0:12:10.64:0,11,363	0/0:15,0:15:11.97:0,12,99	0/0:11,0:10:2.96:0,3,21	./.	./.	./.	0/0:17,0:17:8.81:0,9,96	0/0:17,1:18:14.88:0,15,570	0/0:7,0:7:15.78:0,16,168	0/0:8,0:8:9.86:0,10,277
chr10	50878680	.	G	GAAA	4394.46	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=0.274;DP=521;FS=11.645;HRun=11;HaplotypeScore=94.7093;InbreedingCoeff=0.9226;MQ=67.22;MQ0=0;MQRankSum=-2.895;QD=23.37;ReadPosRankSum=-0.879;VQSLOD=2.2099;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,20:27:38.21:775,38,0	1/1:4,7:11:15.05:282,15,0	0/0:10,0:11:2.96:0,3,33	0/0:7,0:7:2.97:0,3,35	0/0:19,0:20:44.95:0,45,509	1/1:5,17:25:27.03:438,27,0	1/1:5,10:16:27.03:421,27,0	0/0:22,0:22:44.76:0,45,214	1/1:6,13:19:21.05:361,21,0	0/0:24,0:27:29.60:0,30,552	0/0:18,0:22:29.93:0,30,362	1/1:0,7:7:12.04:226,12,0	1/1:5,9:14:15.05:282,15,0	0/0:23,0:23:45.04:0,45,526	1/1:1,9:13:27.09:463,27,0	0/0:26,0:26:20.25:0,20,658	0/0:22,0:23:49.63:0,50,593	0/0:23,0:25:56.81:0,57,613	0/0:21,0:21:38.77:0,39,206	0/0:21,0:21:18.91:0,19,126	0/0:14,0:14:30.77:0,31,125	1/1:10,8:20:12.27:317,12,0	1/1:4,13:21:20.91:234,21,0	1/1:2,10:15:36.08:597,36,0	0/0:17,0:19:36.13:0,36,440	0/0:17,0:19:40.49:0,40,467	0/0:16,0:16:7.51:0,8,66	0/0:17,0:17:45.07:0,45,526
chr10	50878688	.	A	AT	3161.08	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-9.969;DP=510;FS=5.276;HRun=0;HaplotypeScore=70.2837;InbreedingCoeff=0.9376;MQ=58.74;MQ0=0;MQRankSum=2.775;QD=30.69;ReadPosRankSum=-0.552;VQSLOD=3.0094;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:45.95:0,46,272	0/0:7,0:7:17.40:0,17,104	0/0:4,0:4:8.97:0,9,75	0/0:3,0:3:3.01:0,3,42	0/0:21,0:21:62.98:0,63,739	0/0:27,0:27:43.79:0,44,298	0/0:16,0:16:34.12:0,34,209	1/1:1,26:27:81.05:913,81,0	0/0:17,0:17:28.51:0,29,164	0/0:25,0:25:68:0,68,805	0/0:23,0:23:54.76:0,55,633	0/0:8,0:8:14.36:0,14,83	0/0:10,0:10:17.12:0,17,95	0/0:22,0:22:57.06:0,57,708	0/0:14,0:14:29.24:0,29,162	0/0:27,0:27:80.44:0,80,971	0/0:21,0:21:56.52:0,57,782	0/0:24,0:24:72.01:0,72,846	1/1:0,24:24:72.14:908,72,0	1/1:0,20:20:48:602,48,0	1/1:4,13:17:21.53:509,22,0	0/0:15,0:15:25.62:0,26,156	0/0:22,0:22:32.58:0,33,225	0/0:15,0:15:37.41:0,37,216	0/0:20,0:20:43.28:0,43,645	0/0:21,0:21:55.51:0,56,695	1/1:0,15:15:30.10:402,30,0	0/0:19,0:19:57.13:0,57,723
chr10	50879601	.	G	GAGGAT	15795.32	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=16.611;DP=623;FS=4.525;HRun=0;HaplotypeScore=122.9619;InbreedingCoeff=0.9976;MQ=65.57;MQ0=0;MQRankSum=-18.294;QD=73.13;ReadPosRankSum=1.131;VQSLOD=6.7348;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,14:18:36.12:1154,36,0	1/1:2,8:12:21.07:675,21,0	0/0:17,0:16:41.99:0,42,797	0/0:6,0:6:18.06:0,18,381	0/0:44,0:44:99:0,129,2750	1/1:6,24:31:75.26:2410,75,0	1/1:3,11:17:39.09:1145,39,0	0/0:41,0:41:99:0,120,2532	1/1:2,14:20:48.12:1466,48,0	0/0:29,0:29:84.27:0,84,1795	0/0:19,0:19:57.18:0,57,1208	1/1:5,16:23:51.13:1563,51,0	1/1:6,24:32:81.19:2447,81,0	0/0:24,0:24:69.24:0,69,1517	1/1:0,12:16:36.12:1157,36,0	0/0:22,0:22:63.22:0,63,1386	0/0:22,0:22:66.18:0,66,1362	0/0:17,0:17:45.13:0,45,953	0/0:21,0:21:57.18:0,57,1181	0/0:27,0:27:78.25:0,78,1663	0/0:18,0:18:54.19:0,54,1184	1/1:1,18:20:54.19:1734,54,0	1/1:1,16:19:45.15:1446,45,0	1/1:2,6:8:21.03:598,21,0	0/0:17,0:17:51.16:0,51,1079	0/0:24,0:24:69.23:0,69,1499	0/0:35,0:35:99:0,105,2321	0/0:24,0:24:69.24:0,69,1537
chr10	50879961	.	C	CACTT	20926.73	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=1.907;DP=596;FS=3.054;HRun=0;HaplotypeScore=92.7603;InbreedingCoeff=0.9948;MQ=77.28;MQ0=0;MQRankSum=-7.822;QD=68.17;ReadPosRankSum=0.154;VQSLOD=7.1097;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,13:16:33.11:903,33,0	1/1:1,6:7:21.07:574,21,0	0/0:17,0:17:48.16:0,48,901	0/0:14,0:14:39.13:0,39,755	0/0:45,0:44:99:0,132,2485	1/1:7,19:28:72.04:1660,72,0	1/1:1,8:11:27.09:738,27,0	1/1:10,24:34:99:2602,99,0	1/1:2,18:20:57.15:1489,57,0	0/0:35,0:35:99:0,99,1889	0/0:16,0:16:48.16:0,48,905	1/1:0,14:14:42.14:1149,42,0	1/1:2,17:20:48.16:1270,48,0	0/0:21,0:21:63.22:0,63,1220	1/1:3,10:15:36.04:860,36,0	0/0:23,0:23:66.23:0,66,1279	0/0:21,0:21:57.17:0,57,1056	0/0:22,0:22:63.22:0,63,1218	1/1:3,10:14:39.12:970,39,0	1/1:5,26:32:93.15:2209,93,0	1/1:2,10:12:27.05:677,27,0	1/1:1,23:24:72.20:1908,72,0	1/1:1,17:19:51.18:1396,51,0	1/1:2,4:6:12.04:328,12,0	0/0:26,0:26:78.26:0,78,1468	0/0:28,0:28:78.27:0,78,1491	1/1:3,31:35:87.17:2195,87,0	0/0:21,0:21:60.21:0,60,1163
chr10	50880128	.	CACCA	C	9452.08	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=15.973;DP=573;FS=12.058;HRun=0;HaplotypeScore=102.3403;InbreedingCoeff=0.9973;MQ=90.41;MQ0=1;MQRankSum=-8.371;QD=49.23;ReadPosRankSum=4.342;VQSLOD=5.0173;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,10:11:24.08:443,24,0	1/1:2,11:13:30.10:559,30,0	0/0:29,0:29:81.26:0,81,1952	0/0:18,0:19:48.08:0,48,1086	0/0:26,0:26:78.26:0,78,1991	1/1:1,20:21:57.20:1063,57,0	1/1:1,10:11:30.10:559,30,0	0/0:24,0:24:63.22:0,63,1681	1/1:0,21:20:60.21:1119,60,0	0/0:20,0:20:57.20:0,57,1495	0/0:24,0:24:69.24:0,69,1800	1/1:0,12:12:36.12:672,36,0	1/1:0,23:23:63.22:1175,63,0	0/0:16,0:16:48.16:0,48,1244	1/1:1,25:26:69.24:1287,69,0	0/0:20,0:20:54.19:0,54,1429	0/0:15,0:15:45.15:0,45,1171	0/0:16,0:16:47.35:0,47,1087	0/0:19,0:19:48.16:0,48,1220	0/0:32,0:32:93.32:0,93,2457	0/0:16,0:16:48.15:0,48,1224	1/1:0,18:18:45.15:838,45,0	1/1:2,18:20:51.17:951,51,0	1/1:1,15:16:42.14:784,42,0	0/0:34,0:34:99:0,99,2611	0/0:33,0:33:99:0,99,2617	0/0:33,0:33:93.31:0,93,2412	0/0:5,0:5:15.05:0,15,400
chr10	50880495	.	T	TA	6657.89	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=8.036;DP=590;FS=5.342;HRun=1;HaplotypeScore=121.7912;InbreedingCoeff=0.9984;MQ=58.90;MQ0=2;MQRankSum=-2.528;QD=32.96;ReadPosRankSum=-0.364;VQSLOD=4.1941;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,15:20:30.96:540,31,0	1/1:1,10:11:26.68:390,27,0	0/0:15,0:12:36.12:0,36,503	0/0:15,0:11:27.09:0,27,358	0/0:26,0:26:75.25:0,75,1047	1/1:2,20:21:46.92:579,47,0	1/1:2,13:15:32.18:440,32,0	0/0:41,0:40:99:0,111,1410	1/1:1,19:20:42.02:602,42,0	0/0:29,0:29:81.27:0,81,1136	0/0:23,0:23:63.21:0,63,881	1/1:1,16:17:42.14:666,42,0	1/1:1,21:22:48.16:764,48,0	0/0:19,0:19:57.19:0,57,797	1/1:0,26:26:71:934,71,0	0/0:28,0:28:84.27:0,84,1158	0/0:11,2:13:21.54:0,22,295	0/0:14,1:15:21.79:0,22,545	0/0:21,0:21:63.14:0,63,854	0/0:31,0:31:90.30:0,90,1257	0/0:20,0:20:57.19:0,57,797	1/1:1,20:21:45.15:699,45,0	1/1:0,16:16:39.13:618,39,0	1/1:2,10:12:27.09:424,27,0	0/0:28,0:28:81.27:0,81,1133	0/0:30,0:30:90.28:0,90,1226	0/0:21,0:21:60.19:0,60,834	0/0:12,0:12:36.12:0,36,503
chr10	50880502	.	TA	T	4632.49	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=4.182;DP=581;FS=6.769;HRun=1;HaplotypeScore=126.0190;InbreedingCoeff=0.9953;MQ=56.62;MQ0=3;MQRankSum=-0.373;QD=36.19;ReadPosRankSum=-0.156;VQSLOD=3.8943;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:21.38:0,21,569	0/0:9,0:9:23.09:0,23,317	0/0:16,0:10:30.10:0,30,451	0/0:13,0:6:18.06:0,18,261	0/0:26,0:26:75.24:0,75,1157	0/0:24,0:23:46.95:0,47,778	0/0:13,0:13:33.94:0,34,447	1/1:6,34:39:23.35:1139,23,0	0/0:19,0:19:49.32:0,49,625	0/0:29,0:29:87.29:0,87,1339	0/0:25,0:25:75.24:0,75,1154	0/0:18,0:18:54.17:0,54,811	0/0:21,0:21:48.16:0,48,751	0/0:18,0:18:54.18:0,54,853	0/0:27,0:27:72.33:0,72,1014	0/0:28,0:28:84.29:0,84,1326	0/0:12,0:12:25.90:0,26,383	0/0:16,0:15:43.39:0,43,660	1/1:1,18:19:33.14:705,33,0	1/1:0,30:30:87.29:1214,87,0	1/1:0,17:17:48.16:671,48,0	0/0:21,0:21:48.15:0,48,747	0/0:17,0:17:45.09:0,45,665	0/0:10,0:10:27.09:0,27,417	0/0:30,0:30:90.31:0,90,1410	0/0:29,0:29:87.30:0,87,1366	1/1:0,22:22:66.22:904,66,0	0/0:12,0:12:36.12:0,36,575
chr10	50880533	.	A	ATAGG	5675.59	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=2.341;DP=591;FS=18.855;HRun=0;HaplotypeScore=149.2634;InbreedingCoeff=0.9572;MQ=66.84;MQ0=2;MQRankSum=-2.181;QD=25.00;ReadPosRankSum=-1.540;VQSLOD=3.1731;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:24:65.26:565,65,0	1/1:9,1:10:17.80:168,18,0	0/0:14,0:11:33.06:0,33,359	0/0:19,0:14:38.73:0,39,359	0/0:26,0:26:66.12:0,66,1009	1/1:15,10:25:65.89:851,66,0	1/1:8,3:11:21.01:264,21,0	0/0:40,0:38:99:0,99,844	1/1:11,8:19:42:564,42,0	0/0:26,0:26:75.17:0,75,1143	0/0:21,0:21:57.10:0,57,856	1/1:25,0:25:71.82:598,72,0	1/1:29,0:29:67.83:555,68,0	0/0:17,0:17:45.12:0,45,757	1/1:17,12:29:72.11:1107,72,0	0/0:27,0:27:81.18:0,81,1274	0/0:14,0:14:27.52:0,28,371	0/1:11,0:10:0.56:1,0,407	0/0:23,0:23:69.16:0,69,972	0/0:34,0:34:96.13:0,96,1243	0/0:10,0:10:27.06:0,27,396	1/1:22,0:22:56.62:450,57,0	1/1:16,0:16:44.31:362,44,0	1/1:6,0:6:17.96:192,18,0	0/0:28,0:28:84.14:0,84,1213	0/0:30,0:30:81.19:0,81,1172	0/0:23,0:22:69.03:0,69,885	0/0:12,0:12:36.11:0,36,650
chr10	50883217	.	T	TA	13722.72	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=13.803;DP=600;FS=6.533;HRun=2;HaplotypeScore=98.4028;InbreedingCoeff=0.9977;MQ=91.68;MQ0=0;MQRankSum=-4.073;QD=38.12;ReadPosRankSum=3.282;VQSLOD=4.9595;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,37:37:99:1468,102,0	1/1:0,6:6:15.05:216,15,0	0/0:28,0:28:79.78:0,80,946	0/0:21,0:21:57.14:0,57,671	0/0:13,0:13:36.11:0,36,446	1/1:2,26:29:72.24:1029,72,0	1/1:1,21:22:48.16:691,48,0	1/1:3,28:31:90.23:1250,90,0	1/1:0,16:17:42.14:599,42,0	0/0:26,0:26:75.20:0,75,901	0/0:17,0:17:42.13:0,42,515	1/1:0,15:15:42.14:605,42,0	1/1:1,23:24:69.23:992,69,0	0/0:18,0:18:48.15:0,48,595	1/1:0,30:30:81.27:1166,81,0	0/0:24,0:24:72.23:0,72,893	0/0:21,0:21:57.15:0,57,691	0/0:17,0:17:39.08:0,39,466	1/1:1,25:26:75.25:1078,75,0	1/1:1,21:22:60.20:864,60,0	1/1:1,17:18:45.15:648,45,0	1/1:0,20:20:57.19:820,57,0	1/1:0,17:17:51.17:735,51,0	1/1:0,19:19:45.15:648,45,0	0/0:12,0:12:36.11:0,36,446	0/0:21,0:21:60.19:0,60,744	1/1:2,25:27:32.04:913,32,0	0/0:21,0:22:65.39:0,65,773
chr10	50883620	.	CT	C	1801	PASS	AB=0.704;AC=28;AF=0.500;AN=56;BaseQRankSum=8.536;DP=475;FS=9.459;HRun=15;HaplotypeScore=73.5334;InbreedingCoeff=0.3817;MQ=64.25;MQ0=1;MQRankSum=-0.619;QD=5.87;ReadPosRankSum=4.014;VQSLOD=2.1080;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:9,5:15:3.92:92,0,4	1/1:2,6:8:14.68:93,15,0	1/1:13,1:10:6.09:30,6,0	0/0:11,0:4:0:0,0,0	0/0:17,1:22:28.39:0,28,334	1/1:10,13:25:31.38:198,31,0	1/1:3,1:5:7.90:44,8,0	0/1:16,14:30:0.36:174,0,0	1/1:2,7:9:14.72:96,15,0	0/0:17,0:17:17.99:0,18,154	0/0:23,0:23:13.70:0,14,233	1/1:5,0:5:2.80:18,3,0	0/1:10,2:14:21.23:65,0,21	0/0:15,0:15:23.02:0,23,167	1/1:12,10:24:33.38:203,33,0	0/0:24,0:24:41.93:0,42,346	0/0:16,1:17:14.89:0,15,230	0/0:14,2:16:1.69:0,2,129	1/1:6,6:15:7.27:117,7,0	0/1:12,18:31:46.43:248,0,46	0/1:4,6:11:11.21:30,0,11	0/1:10,9:20:0.46:126,0,0	0/1:9,15:24:9.07:189,0,9	1/1:14,4:19:24.82:155,25,0	0/1:17,1:18:10.53:11,0,151	0/0:21,0:22:24.36:0,24,190	1/1:13,6:19:14.29:96,14,0	0/0:1,0:1:3:0,3,26
chr10	50883811	.	TA	T	3869.76	PASS	AB=0.871;AC=33;AF=0.589;AN=56;BaseQRankSum=12.217;DP=649;FS=20.370;HRun=12;HaplotypeScore=87.6359;InbreedingCoeff=0.8989;MQ=71.39;MQ0=5;MQRankSum=0.323;QD=9.82;ReadPosRankSum=1.566;VQSLOD=1.1377;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,1:25:34.61:100,35,0	1/1:1,0:10:16.29:47,16,0	0/0:14,0:13:20.60:0,21,165	0/0:13,0:13:7.65:0,8,85	0/1:22,3:27:4.57:5,0,511	1/1:1,18:19:41.84:325,42,0	1/1:2,15:17:14.38:292,14,0	1/1:6,29:36:85.63:652,86,0	1/1:3,14:17:38.84:302,39,0	0/0:29,1:32:65.93:0,66,642	0/0:27,0:27:68.15:0,68,666	1/1:2,0:21:33.05:98,33,0	1/1:6,0:32:45.45:135,45,0	0/0:20,1:22:18.65:0,19,338	1/1:5,0:27:37.30:111,37,0	0/0:22,2:24:19.60:0,20,543	0/0:30,2:32:11.26:0,11,681	0/0:17,0:21:21.69:0,22,328	1/1:1,21:23:60.77:443,61,0	1/1:6,20:26:26.04:368,26,0	1/1:3,13:16:29.85:228,30,0	1/1:6,0:29:41.18:119,41,0	1/1:4,0:24:32.58:94,33,0	1/1:2,0:12:18.33:53,18,0	0/0:31,3:34:51.72:0,52,677	0/0:24,0:24:64.27:0,64,623	1/1:2,24:28:66.83:500,67,0	0/0:10,1:11:3.85:0,4,220
chr10	50887885	.	G	GGTGT	2105.37	PASS	AB=0.919;AC=37;AF=0.685;AN=54;BaseQRankSum=3.212;DP=693;FS=2.573;HRun=0;HaplotypeScore=148.5214;InbreedingCoeff=0.4749;MQ=56.52;MQ0=30;MQRankSum=-2.017;QD=4.27;ReadPosRankSum=-2.553;VQSLOD=1.5776;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:36,0:36:23.82:292,24,0	1/1:6,0:7:2.87:15,3,0	./.	0/0:36,0:16:0:0,0,0	0/0:25,0:24:12.04:0,12,185	1/1:30,0:29:8.94:80,9,0	1/1:22,0:22:2.64:24,3,0	1/1:33,0:32:6.49:99,6,0	1/1:28,0:32:9.88:95,10,0	1/1:23,0:27:11.67:76,12,0	0/1:10,0:10:45.16:73,0,45	1/1:21,1:26:12.51:227,13,0	1/1:15,0:14:9.48:131,9,0	0/0:9,0:9:11.99:0,12,163	1/1:21,1:31:7.78:109,8,0	0/1:17,0:25:38.18:38,0,116	0/0:32,0:39:35.54:0,36,413	0/0:22,0:23:17.47:0,17,200	1/1:18,0:17:3.01:64,3,0	1/1:10,2:18:9.02:192,9,0	1/1:29,0:29:20.89:312,21,0	1/1:19,0:20:3.01:45,3,0	1/1:22,0:22:2.99:24,3,0	1/1:22,0:24:5.98:70,6,0	0/0:26,0:28:16.62:0,17,322	0/1:26,0:26:28.52:106,0,29	1/1:14,1:19:14.55:207,15,0	0/0:9,0:9:8.99:0,9,110
chr10	50888679	.	TACAAAAAAAAAAAA	T	5102.77	PASS	AB=0.956;AC=10;AF=0.179;AN=56;BaseQRankSum=11.524;DP=451;FS=9.173;HRun=0;HaplotypeScore=176.9732;InbreedingCoeff=0.1011;MQ=69.21;MQ0=7;MQRankSum=-9.665;QD=34.95;ReadPosRankSum=6.610;VQSLOD=2.9338;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:26:99:714,0,196	1/1:5,0:5:15.05:428,15,0	0/0:34,0:10:14.55:0,15,280	0/1:27,0:14:5.64:6,0,166	0/0:20,0:20:54.04:0,54,1951	0/0:16,0:16:48.11:0,48,2354	0/0:4,0:3:6.01:0,6,229	0/0:24,0:24:62.93:0,63,2243	0/0:15,0:15:45.07:0,45,1484	0/0:14,0:13:36.08:0,36,1438	0/0:15,0:15:39.10:0,39,1680	0/1:13,1:14:99:495,0,111	0/1:15,3:18:99:954,0,114	0/0:17,0:17:48.07:0,48,1946	0/1:14,2:16:48.77:861,0,49	0/0:11,0:11:24.05:0,24,1005	0/0:28,0:28:78.07:0,78,3235	0/0:9,0:9:23.99:0,24,858	0/0:13,0:13:17.47:0,17,1832	0/0:16,0:15:42.06:0,42,1543	0/0:7,0:7:21.04:0,21,759	0/1:11,0:11:28.99:576,0,29	0/1:15,0:15:1.07:889,0,1	0/1:12,0:12:77.83:181,0,78	0/0:18,0:18:51.14:0,51,2708	0/0:20,0:20:57.13:0,57,1944	0/0:15,0:15:41.28:0,41,1739	0/0:9,0:8:21.07:0,21,840
chr10	50889172	.	AC	A	6044.79	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=14.802;DP=738;FS=0.663;HRun=4;HaplotypeScore=67.9697;InbreedingCoeff=0.9986;MQ=81.52;MQ0=0;MQRankSum=-6.186;QD=32.15;ReadPosRankSum=4.855;VQSLOD=5.2220;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,22:23:60.18:720,60,0	1/1:0,6:6:18.06:216,18,0	0/0:27,0:27:72.22:0,72,988	0/0:22,0:22:63.19:0,63,835	0/0:25,0:25:69.22:0,69,947	0/0:27,0:27:78.26:0,78,1092	0/0:28,0:28:84.24:0,84,1124	0/0:37,0:37:99:0,105,1468	0/0:17,0:17:51.17:0,51,714	0/0:36,0:36:99:0,99,1349	0/0:27,0:27:78.26:0,78,1091	1/1:2,18:20:48.15:576,48,0	1/1:1,32:33:84.26:1004,84,0	0/0:28,0:28:81.24:0,81,1094	1/1:2,28:30:81.25:972,81,0	0/0:32,0:32:93.28:0,93,1267	0/0:31,0:30:87.29:0,87,1213	0/0:17,0:17:48.16:0,48,672	0/0:24,0:24:69.22:0,69,947	0/0:39,0:39:99:0,114,1565	0/0:26,0:26:78.24:0,78,1057	1/1:1,31:32:90.23:1064,90,0	1/1:0,24:24:72.18:847,72,0	1/1:1,19:20:54.17:648,54,0	0/0:31,0:31:90.23:0,90,1199	0/0:25,0:25:72.24:0,72,1007	0/0:37,0:36:99:0,111,1517	0/0:14,0:13:42.14:0,42,588
chr10	50889409	.	T	TACAA	21541.57	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=0.849;DP=820;FS=0.297;HRun=0;HaplotypeScore=129.0991;InbreedingCoeff=0.9997;MQ=76.06;MQ0=1;MQRankSum=-4.977;QD=46.33;ReadPosRankSum=1.251;VQSLOD=5.5953;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:14,20:34:54.06:1209,54,0	1/1:1,13:14:39.13:970,39,0	0/0:38,0:35:31.31:0,31,844	0/0:28,0:28:47.92:0,48,751	0/0:35,0:35:75.26:0,75,1264	1/1:13,27:40:75.17:1761,75,0	1/1:13,14:29:48.16:1195,48,0	1/1:16,14:30:57.18:1298,57,0	1/1:5,24:29:66.23:1629,66,0	0/0:31,0:31:81.28:0,81,1358	0/0:16,0:16:42.14:0,42,710	1/1:14,21:35:54.19:1340,54,0	1/1:6,23:29:53.97:1345,54,0	0/0:23,0:23:60.19:0,60,992	1/1:1,31:32:87.30:2173,87,0	0/0:34,0:34:81.28:0,81,1370	0/0:31,0:31:90.22:0,90,1483	0/0:29,0:29:81.23:0,81,1305	1/1:11,13:24:42.13:952,42,0	1/1:5,26:32:78.11:1723,78,0	1/1:5,11:18:27.09:675,27,0	1/1:7,14:20:36.08:763,36,0	1/1:7,14:23:36.12:899,36,0	1/1:6,20:28:51.18:1271,51,0	0/0:31,0:31:84.24:0,84,1344	0/0:34,0:34:90.29:0,90,1473	1/1:7,39:47:96.30:2337,96,0	0/0:24,0:24:40.11:0,40,840
chr10	50890131	.	GGATGATGATGAT	G	6134.10	PASS	AC=26;AF=0.565;AN=46;BaseQRankSum=10.952;DP=691;FS=4.469;HRun=0;HaplotypeScore=251.5454;InbreedingCoeff=0.8752;MQ=66.75;MQ0=6;MQRankSum=-11.102;QD=21.01;ReadPosRankSum=1.664;VQSLOD=3.1991;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:15:3.01:47,3,0	1/1:8,0:15:24.08:669,24,0	./.	./.	0/0:28,0:28:48.16:0,48,2608	1/1:28,0:33:9.03:251,9,0	./.	./.	1/1:10,0:15:12.04:335,12,0	0/0:21,0:21:21.07:0,21,1073	0/0:23,0:23:39.13:0,39,2262	1/1:13,14:27:30.10:1022,30,0	1/1:17,14:33:39.13:1281,39,0	0/0:34,0:35:78.25:0,78,4152	1/1:24,0:33:21.07:584,21,0	0/0:34,0:35:57.20:0,57,2952	0/0:33,0:34:63.10:0,63,3337	0/0:19,0:19:21.07:0,21,1157	1/1:14,0:17:9.03:251,9,0	1/1:19,0:22:6.02:167,6,0	./.	1/1:9,6:15:12.04:409,12,0	1/1:9,7:16:15.05:509,15,0	1/1:16,8:24:4.16:106,4,0	0/0:32,0:34:48.16:0,48,2491	0/0:30,0:30:45.15:0,45,2201	1/1:15,0:26:18.06:503,18,0	0/0:6,0:6:6.02:0,6,348
chr10	50890715	.	G	GAC	13796.79	PASS	AB=0.545;AC=31;AF=0.554;AN=56;BaseQRankSum=-13.739;DP=771;FS=2.737;HRun=0;HaplotypeScore=92.8597;InbreedingCoeff=0.8435;MQ=65.41;MQ0=4;MQRankSum=-2.491;QD=29.35;ReadPosRankSum=2.458;VQSLOD=6.6544;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,27:34:57.19:916,57,0	0/1:3,15:17:15.91:583,0,16	0/0:32,0:28:27.87:0,28,302	0/0:35,0:30:44.62:0,45,483	0/0:38,0:38:99:0,99,1187	1/1:5,15:22:30.10:483,30,0	1/1:9,27:36:46.21:996,46,0	1/1:6,23:29:69.19:1054,69,0	1/1:5,27:32:26.84:930,27,0	0/0:22,0:22:48.14:0,48,571	0/0:17,0:17:35.47:0,35,408	1/1:11,26:37:2.59:1039,3,0	1/1:6,28:34:66.23:1064,66,0	0/0:24,0:24:60.14:0,60,691	1/1:10,35:45:81.28:1305,81,0	0/0:34,0:34:81.25:0,81,982	0/0:24,0:24:57.17:0,57,687	0/0:12,0:12:27.02:0,27,309	1/1:3,13:16:8.68:581,9,0	1/1:6,17:25:45.15:726,45,0	1/1:12,24:37:2.47:1040,2,0	1/1:1,23:24:57.18:904,57,0	1/1:6,13:20:33.11:532,33,0	1/1:8,14:22:2.74:545,3,0	0/0:19,0:19:45.12:0,45,532	0/0:29,0:32:73.69:0,74,881	1/1:6,33:37:69.05:1100,69,0	0/0:10,0:10:18.05:0,18,218
chr10	50890917	.	C	CATACAG	26027.78	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=-6.192;DP=743;FS=8.299;HRun=0;HaplotypeScore=170.7729;InbreedingCoeff=0.9963;MQ=76.40;MQ0=0;MQRankSum=-19.002;QD=63.17;ReadPosRankSum=-2.430;VQSLOD=4.3007;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,32:45:69.42:2395,69,0	1/1:2,5:7:15.05:524,15,0	0/0:47,0:47:99:0,120,2611	0/0:29,0:29:74.74:0,75,1548	0/0:31,0:31:90.31:0,90,2075	1/1:4,13:17:33.11:1152,33,0	1/1:9,12:23:39.13:1339,39,0	1/1:11,33:48:99:3884,125,0	1/1:3,10:16:30.10:1048,30,0	0/0:26,0:26:66.23:0,66,1522	0/0:26,0:26:78.24:0,78,1654	1/1:6,27:33:90.31:3102,90,0	1/1:6,17:22:54.18:1737,54,0	0/0:31,0:31:87.27:0,87,1871	1/1:5,26:31:75.26:2594,75,0	0/0:26,0:26:72.25:0,72,1641	0/0:19,0:19:54.19:0,54,1217	0/0:26,0:26:69.64:0,70,1427	1/1:4,15:23:63.21:1909,63,0	1/1:4,22:28:39.13:1362,39,0	1/1:10,12:24:26.66:943,27,0	1/1:4,12:16:33.11:1137,33,0	1/1:6,17:25:24.08:833,24,0	1/1:4,20:28:19.32:729,19,0	0/0:26,0:26:61.77:0,62,1586	0/0:31,0:31:90.30:0,90,2016	1/1:7,14:24:39.13:1341,39,0	0/0:13,0:13:39.10:0,39,810
chr10	50891843	.	CAG	C	200.56	PASS	AB=0.954;AC=9;AF=0.161;AN=56;BaseQRankSum=2.101;DP=680;FS=33.322;HRun=0;HaplotypeScore=146.2028;InbreedingCoeff=-0.1890;MQ=55.84;MQ0=15;MQRankSum=-1.305;QD=0.92;ReadPosRankSum=-4.824;VQSLOD=-0.7173;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:49.63:0,50,534	0/1:13,0:12:23.01:23,0,134	0/0:8,0:6:0.93:0,1,36	0/1:16,0:9:6.96:7,0,27	0/0:19,0:18:38.77:0,39,529	0/0:33,0:30:35.87:0,36,371	0/0:27,0:26:20.91:0,21,234	0/0:27,0:26:38.54:0,39,451	0/0:22,0:22:39.02:0,39,465	0/0:21,0:21:10.38:0,10,522	0/0:15,0:14:15.97:0,16,382	0/1:31,0:31:45.62:46,0,399	0/1:21,1:22:49.67:50,0,265	0/1:18,0:18:17.03:17,0,478	0/1:16,10:26:99:140,0,215	0/0:28,0:27:37:0,37,724	0/0:17,0:17:35.04:0,35,468	0/0:22,0:21:58.97:0,59,582	0/0:14,0:14:31.52:0,32,212	0/0:34,0:33:19.41:0,19,284	0/0:43,0:40:52.46:0,52,567	0/1:30,1:31:0.49:0,0,319	0/1:25,1:26:30.52:31,0,216	0/1:34,1:35:18.62:19,0,543	0/0:25,0:24:60.07:0,60,905	0/0:31,0:31:40.23:0,40,951	0/0:27,0:25:27.23:0,27,223	0/0:12,0:12:17.06:0,17,300
chr10	50891845	.	GACACAC	G	1626.82	PASS	AB=0.916;AC=14;AF=0.259;AN=54;BaseQRankSum=-1.192;DP=686;FS=0.598;HRun=0;HaplotypeScore=183.2298;InbreedingCoeff=0.0631;MQ=54.76;MQ0=16;MQRankSum=-2.727;QD=5.01;ReadPosRankSum=-4.602;VQSLOD=0.7603;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:31.44:0,31,528	0/0:7,0:12:16.81:0,17,199	./.	0/0:16,0:8:3.45:0,3,23	0/0:14,0:18:8.85:0,9,608	0/1:30,0:29:99:142,0,256	0/1:26,0:25:10.70:154,0,11	1/1:27,0:26:1.86:211,2,0	0/1:22,0:23:64.75:65,0,405	0/1:13,0:22:0.86:1,0,734	0/0:13,0:14:26.30:0,26,593	0/0:31,0:31:42.12:0,42,680	0/0:22,0:22:41.39:0,41,623	0/0:15,0:18:36.12:0,36,866	0/0:26,0:26:20.30:0,20,293	0/1:25,0:29:2.18:2,0,1142	0/1:16,0:17:29.22:29,0,417	0/1:23,0:23:26.63:27,0,598	0/1:11,4:15:7.17:141,0,7	1/1:16,18:34:4.46:210,4,0	0/1:46,0:43:0.05:520,0,0	0/0:30,0:30:15.23:0,15,309	0/0:25,0:25:16.65:0,17,223	0/0:35,0:35:40.39:0,40,678	0/0:24,0:24:39.13:0,39,1106	0/0:29,0:32:59.95:0,60,1193	0/1:12,15:26:36.82:269,0,37	0/0:8,0:9:18.06:0,18,468
chr10	50891851	.	C	CAG	3141.65	PASS	AB=0.925;AC=19;AF=0.339;AN=56;BaseQRankSum=2.069;DP=685;FS=12.240;HRun=0;HaplotypeScore=136.6546;InbreedingCoeff=-0.2260;MQ=52.84;MQ0=16;MQRankSum=3.466;QD=7.21;ReadPosRankSum=-0.351;VQSLOD=2.6066;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:37,0:36:99:272,0,250	0/1:13,0:12:44.22:66,0,44	0/0:9,0:4:6.01:0,6,69	0/0:16,0:4:4.55:0,5,61	0/0:20,0:19:30.62:0,31,490	1/1:6,25:28:17.36:429,17,0	0/1:5,19:23:10.70:158,0,11	0/1:16,7:22:99:241,0,246	1/1:4,17:21:6.48:357,6,0	0/1:22,0:22:70.71:71,0,228	0/0:18,0:17:21.03:0,21,345	0/1:32,0:32:99:223,0,267	0/1:21,0:21:59.55:60,0,358	0/0:22,0:22:51.02:0,51,607	0/1:26,1:27:99:151,0,145	0/0:31,1:31:17.30:0,17,712	0/1:14,1:15:18.63:19,0,329	0/1:22,1:22:0.50:1,0,525	0/1:15,0:15:36.37:36,0,167	0/0:33,1:33:2.79:0,3,207	0/1:24,19:40:99:506,0,192	0/1:27,0:27:99:178,0,146	0/1:27,0:27:99:126,0,140	0/1:35,0:35:99:413,0,157	0/0:25,0:24:69.07:0,69,817	0/0:36,0:36:42.12:0,42,929	0/0:27,0:25:19.34:0,19,178	0/0:10,0:10:29.95:0,30,293
chr10	50892752	.	TG	T	6878.71	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=14.160;DP=653;FS=3.840;HRun=1;HaplotypeScore=65.2750;InbreedingCoeff=0.9999;MQ=67.23;MQ0=1;MQRankSum=1.261;QD=36.98;ReadPosRankSum=0.478;VQSLOD=5.1548;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,33:33:90.30:1258,90,0	1/1:0,13:13:39.10:524,39,0	0/0:30,0:26:78.24:0,78,1209	0/0:21,0:19:43.01:0,43,763	0/0:37,0:37:99:0,108,1703	0/0:26,0:26:78.23:0,78,1197	0/0:24,0:24:72.21:0,72,1101	0/0:24,0:24:72.24:0,72,1129	0/0:17,0:17:51.17:0,51,813	0/0:27,0:27:81.27:0,81,1272	0/0:16,0:16:48.16:0,48,763	1/1:0,16:16:39.13:545,39,0	1/1:0,35:35:84.23:1175,84,0	0/0:15,0:15:45.14:0,45,695	1/1:0,20:20:54.18:755,54,0	0/0:16,0:16:48.16:0,48,765	0/0:18,0:18:51.17:0,51,812	0/0:18,0:18:54.18:0,54,862	0/0:18,0:16:45.15:0,45,719	0/0:47,0:47:99:0,141,2186	0/0:20,0:20:60.20:0,60,959	1/1:0,21:21:51.13:691,51,0	1/1:0,31:31:90.30:1258,90,0	1/1:0,17:17:48.16:671,48,0	0/0:14,0:14:39.13:0,39,622	0/0:22,0:22:66.21:0,66,1033	0/0:45,0:45:99:0,135,2110	0/0:12,0:12:33.58:0,34,528
chr10	50893700	.	G	GA	7367.33	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-14.173;DP=687;FS=0.659;HRun=5;HaplotypeScore=64.8696;InbreedingCoeff=0.9991;MQ=81.05;MQ0=0;MQRankSum=-3.592;QD=32.89;ReadPosRankSum=2.374;VQSLOD=5.4585;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,49:53:99:1733,132,0	1/1:2,13:15:33.11:434,33,0	0/0:22,0:22:54.11:0,54,570	0/0:22,0:22:63.08:0,63,649	0/0:21,0:21:60.14:0,60,638	0/0:24,0:24:28.18:0,28,585	0/0:30,0:30:81.17:0,81,853	0/0:27,0:27:72.16:0,72,760	0/0:31,0:31:87.20:0,87,926	0/0:23,0:23:66.17:0,66,709	0/0:15,0:15:45.11:0,45,483	1/1:2,27:29:81.26:1066,81,0	1/1:2,26:28:69.22:908,69,0	0/0:27,0:27:69.17:0,69,741	1/1:1,33:34:90.29:1184,90,0	0/0:27,0:27:72.18:0,72,774	0/0:28,0:28:81.14:0,81,846	0/0:19,0:19:51.13:0,51,548	0/0:19,0:19:45.09:0,45,469	0/0:17,0:17:45.11:0,45,483	0/0:31,0:31:87.22:0,87,935	1/1:1,22:24:63.20:819,63,0	1/1:5,13:18:36.12:474,36,0	1/1:2,21:23:57.19:750,57,0	0/0:22,0:22:66.15:0,66,699	0/0:24,0:24:72.16:0,72,760	0/0:27,0:27:75.19:0,75,806	0/0:7,0:7:21.05:0,21,226
chr10	50895627	.	CCCCA	C	698.78	PASS	AB=0.917;AC=15;AF=0.278;AN=54;BaseQRankSum=5.719;DP=286;FS=17.654;HRun=0;HaplotypeScore=54.2137;InbreedingCoeff=0.7984;MQ=96.40;MQ0=1;MQRankSum=-1.606;QD=9.08;ReadPosRankSum=-1.851;VQSLOD=0.5136;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:13,1:14:17.72:167,18,0	1/1:5,0:5:2.83:14,3,0	0/0:16,0:16:34.60:0,35,531	0/0:21,0:20:48.62:0,49,862	0/0:6,0:6:18.06:0,18,436	0/0:10,0:10:24.08:0,24,589	0/0:15,0:15:39.84:0,40,715	0/0:18,0:18:45.11:0,45,897	0/0:13,0:13:39.13:0,39,846	0/0:8,0:8:18.06:0,18,388	0/0:8,0:8:21.05:0,21,399	0/1:10,1:11:57.32:184,0,57	1/1:7,2:9:17.87:162,18,0	0/0:10,0:9:24.08:0,24,482	1/1:10,1:11:8.91:92,9,0	0/0:9,0:9:27.05:0,27,422	0/0:10,0:10:30.04:0,30,527	0/0:7,0:7:21.07:0,21,436	0/0:6,0:6:18.06:0,18,405	0/0:7,0:7:18.05:0,18,395	0/0:11,0:10:30.10:0,30,655	1/1:5,0:5:3.47:28,3,0	1/1:2,0:2:5.98:46,6,0	1/1:19,1:20:23.26:183,23,0	0/0:9,0:9:27.08:0,27,538	0/0:10,0:10:21:0,21,405	0/0:14,0:14:42.14:0,42,964	./.
chr10	50895628	.	CCCA	C	1047.19	PASS	AB=0.846;AC=15;AF=0.278;AN=54;BaseQRankSum=4.181;DP=286;FS=28.511;HRun=0;HaplotypeScore=47.2559;InbreedingCoeff=0.8186;MQ=96.36;MQ0=1;MQRankSum=-3.437;QD=13.96;ReadPosRankSum=-2.580;VQSLOD=0.9399;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:12,2:14:17.72:144,18,0	1/1:1,4:5:3.01:44,3,0	0/0:16,0:16:18.21:0,18,382	0/0:21,0:20:48.60:0,49,733	0/0:6,0:6:18.06:0,18,359	0/0:9,0:9:23.66:0,24,486	0/0:15,0:15:23.82:0,24,526	0/0:19,0:19:48.11:0,48,782	0/0:13,0:13:39.13:0,39,677	0/0:8,0:8:18.06:0,18,310	0/0:8,0:8:20.97:0,21,316	0/1:9,2:11:30.10:227,0,30	1/1:7,2:9:17.94:169,18,0	0/0:10,0:9:24:0,24,376	1/1:1,9:10:8.97:99,9,0	0/0:9,0:9:27.01:0,27,348	0/0:10,0:10:29.63:0,30,429	0/0:7,0:7:21.07:0,21,344	0/0:6,0:6:18.06:0,18,328	0/0:7,0:7:18.05:0,18,322	0/0:13,0:12:36.06:0,36,572	1/1:3,2:5:8.97:73,9,0	1/1:2,0:2:5.98:46,6,0	1/1:13,6:19:38.66:427,39,0	0/0:10,0:10:27.91:0,28,423	0/0:9,0:9:20.99:0,21,325	0/0:14,0:14:42.12:0,42,780	./.
chr10	50899891	.	C	CTATGTGTGTGTG	2299.86	PASS	AB=0.736;AC=15;AF=0.268;AN=56;BaseQRankSum=1.378;DP=619;FS=7.141;HRun=0;HaplotypeScore=237.8329;InbreedingCoeff=0.7240;MQ=65.19;MQ0=8;MQRankSum=-2.111;QD=16.08;ReadPosRankSum=-1.030;VQSLOD=1.6297;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:13:14.98:456,15,0	1/1:4,0:4:0.47:1,0,0	0/0:25,0:16:25.64:0,26,587	0/0:21,0:16:44.75:0,45,684	0/0:25,0:25:38.97:0,39,821	0/0:27,0:27:60.17:0,60,1627	0/0:30,0:30:75.15:0,75,1696	0/0:24,0:24:71.97:0,72,1148	0/0:29,0:29:57.11:0,57,1472	0/0:26,0:25:63.17:0,63,1462	0/0:18,0:18:39.03:0,39,761	1/1:21,3:24:27.33:683,27,0	0/1:4,5:15:3.13:169,0,3	0/0:27,0:27:66.35:0,66,1579	1/1:20,2:24:19.18:800,19,0	0/0:35,0:35:96.25:0,96,2745	0/0:30,0:30:78.08:0,78,2039	0/1:19,0:19:45.92:46,0,1045	0/0:9,0:8:21.06:0,21,361	0/0:17,0:16:24.05:0,24,463	0/0:38,0:38:75.20:0,75,1831	1/1:6,0:6:8.44:88,8,0	1/1:14,0:14:8.68:62,9,0	0/1:10,8:24:2.72:170,0,3	0/0:31,0:31:78.06:0,78,1986	0/0:18,0:17:33.15:0,33,432	0/0:29,0:29:69.22:0,69,2161	0/0:17,0:15:36.08:0,36,921
chr10	50899893	.	CTGTG	C	3482.90	PASS	AB=0.921;AC=18;AF=0.321;AN=56;BaseQRankSum=5.621;DP=667;FS=8.016;HRun=0;HaplotypeScore=150.8458;InbreedingCoeff=0.5751;MQ=62.61;MQ0=9;MQRankSum=-2.667;QD=13.09;ReadPosRankSum=2.413;VQSLOD=2.8387;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:5.83:0,6,121	0/0:4,0:4:3.01:0,3,49	0/0:25,0:16:5.99:0,6,95	0/0:21,0:15:9.03:0,9,187	0/1:22,1:25:18.79:19,0,496	1/1:7,17:27:39.12:589,39,0	1/1:14,15:31:2.60:476,3,0	0/1:17,7:25:57.45:337,0,57	1/1:10,0:29:42.05:390,42,0	0/0:24,0:25:50.86:0,51,1007	0/1:19,0:19:0.54:1,0,549	0/0:33,0:33:24.04:0,24,357	0/0:16,0:16:3.01:0,3,52	0/0:24,0:26:2.50:0,2,938	0/0:32,0:32:23.89:0,24,391	0/0:35,1:37:20.77:0,21,1484	0/0:32,0:36:31.11:0,31,1121	0/0:18,0:19:41.85:0,42,785	1/1:8,3:9:5.99:70,6,0	1/1:7,9:16:12.03:153,12,0	1/1:13,21:37:42.13:658,42,0	0/0:9,0:9:6.02:0,6,123	0/1:16,0:16:0:0,0,0	0/0:26,0:26:12.01:0,12,151	0/0:32,0:34:80.75:0,81,1754	0/0:20,0:19:36.07:0,36,648	1/1:5,22:29:41.69:791,42,0	0/0:15,0:15:29.84:0,30,649
chr10	50903105	.	TCA	T	582.44	PASS	AB=0.925;AC=26;AF=0.565;AN=46;BaseQRankSum=3.312;DP=550;FS=1.710;HRun=0;HaplotypeScore=69.5065;InbreedingCoeff=0.0949;MQ=67.76;MQ0=10;MQRankSum=3.103;QD=1.64;ReadPosRankSum=1.721;VQSLOD=1.6160;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:31,5:36:6.01:64,6,0	./.	./.	./.	0/1:16,0:17:2.10:2,0,100	1/1:8,0:12:2.84:14,3,0	1/1:21,0:27:8.36:41,8,0	./.	1/1:9,0:12:5.35:28,5,0	0/0:17,0:17:17.93:0,18,183	0/0:13,0:13:8.74:0,9,70	1/1:13,5:17:12.03:129,12,0	1/1:20,2:22:3:32,3,0	0/1:15,1:17:8.10:8,0,242	0/1:14,0:15:26.35:26,0,56	0/1:17,3:21:22.23:22,0,184	0/1:21,4:25:22.63:23,0,107	0/1:11,1:12:23.17:23,0,48	0/0:14,0:13:9.01:0,9,90	0/0:17,0:19:12:0,12,117	0/1:32,0:43:3.51:4,0,142	1/1:5,5:11:14.74:142,15,0	./.	1/1:20,5:26:14.87:143,15,0	0/1:13,0:15:9.21:9,0,124	0/1:22,0:22:2.64:3,0,212	0/0:16,0:22:12:0,12,112	0/1:3,1:4:23.14:23,0,48
chr10	50903752	.	GAAT	G	1552.83	PASS	AB=0.891;AC=29;AF=0.690;AN=42;BaseQRankSum=0.485;DP=198;FS=1.041;HRun=0;HaplotypeScore=28.6808;InbreedingCoeff=0.3169;MQ=51.31;MQ0=16;MQRankSum=1.441;QD=12.73;ReadPosRankSum=3.069;VQSLOD=2.5961;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:11,1:12:42.60:128,0,43	1/1:0,2:2:6.02:80,6,0	./.	./.	1/1:5,1:6:3.01:40,3,0	0/0:4,0:8:10.28:0,10,121	./.	0/0:24,0:19:18.06:0,18,346	0/0:3,0:4:6.02:0,6,76	1/1:4,2:7:9:101,9,0	1/1:5,1:6:2.68:39,3,0	0/1:4,2:6:48.55:71,0,49	1/1:2,2:4:2.95:40,3,0	1/1:5,1:6:3.01:40,3,0	1/1:4,4:8:9.03:119,9,0	1/1:0,4:4:12.04:159,12,0	1/1:7,9:16:27.09:358,27,0	1/1:9,8:17:18.06:239,18,0	./.	0/0:4,0:4:3.01:0,3,58	0/0:3,0:3:3.01:0,3,58	./.	./.	./.	1/1:4,3:9:17.82:176,18,0	1/1:6,1:6:3.01:40,3,0	0/1:9,0:11:25.49:25,0,75	1/1:0,1:1:3.01:40,3,0
chr10	50903793	.	ATAT	A	324.59	PASS	AB=0.965;AC=10;AF=0.179;AN=56;BaseQRankSum=9.069;DP=251;FS=23.267;HRun=0;HaplotypeScore=37.5988;InbreedingCoeff=-0.2667;MQ=53.92;MQ0=13;MQRankSum=1.598;QD=3.15;ReadPosRankSum=6.212;VQSLOD=0.1167;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:10,6:16:99:141,0,210	0/1:3,0:3:16.24:21,0,16	0/0:9,0:2:5.99:0,6,49	0/0:6,0:3:8.48:0,8,56	0/0:15,0:15:24.41:0,24,277	0/0:7,0:7:15.51:0,16,255	0/0:2,0:2:2.94:0,3,18	0/0:29,0:25:75.03:0,75,944	0/0:8,0:8:23.89:0,24,249	0/1:11,0:11:1.79:2,0,168	0/0:8,0:8:3.01:0,3,110	0/1:9,0:9:9.89:10,0,186	0/0:6,0:6:0.01:0,0,84	0/0:7,0:7:6:0,6,133	0/1:8,0:8:24.90:25,0,78	0/1:8,0:8:35.93:36,0,71	0/1:15,0:15:96.83:99,0,97	0/1:10,0:10:26.51:76,0,27	0/0:14,0:4:11.72:0,12,81	0/0:9,0:9:26.98:0,27,273	0/0:3,0:3:8.98:0,9,118	0/0:3,0:3:8.99:0,9,75	0/0:4,0:4:11.93:0,12,93	0/0:4,0:4:11.94:0,12,92	0/1:11,0:11:25.15:25,0,79	0/0:7,0:7:7.93:0,8,142	0/1:11,1:12:24.62:25,0,224	0/0:7,0:7:5:0,5,126
chr10	50904062	.	TCCCTTGTC	T	9021.06	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=14.741;DP=628;FS=5.443;HRun=0;HaplotypeScore=160.3584;InbreedingCoeff=0.9982;MQ=64.17;MQ0=1;MQRankSum=-13.004;QD=61.37;ReadPosRankSum=-1.691;VQSLOD=4.0138;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,105,4419	0/0:8,0:8:24.08:0,24,1046	0/0:35,0:33:86.69:0,87,2464	0/0:25,0:21:43.14:0,43,1547	0/0:17,0:17:51.17:0,51,2110	1/1:0,16:12:33.11:933,33,0	1/1:1,21:18:39.13:1103,39,0	1/1:2,14:16:42.11:911,42,0	1/1:1,23:22:60.21:1666,60,0	0/0:22,0:22:57.19:0,57,2370	0/0:16,0:16:45.15:0,45,1948	0/0:18,0:18:51.18:0,51,2250	0/0:37,0:37:99:0,102,4396	0/0:28,0:28:81.28:0,81,3527	0/0:31,0:31:90.31:0,90,3843	0/0:34,0:34:96.26:0,96,4059	0/0:24,0:24:66.21:0,66,2782	0/0:22,0:22:63.17:0,63,2471	1/1:2,17:19:51.13:1230,51,0	1/1:1,16:17:45.15:1263,45,0	1/1:1,11:10:17.99:394,18,0	0/0:19,0:19:57.20:0,57,2348	0/0:11,0:11:33.11:0,33,1440	0/0:30,0:30:84.27:0,84,3394	0/0:24,0:24:72.25:0,72,3190	0/0:27,0:27:81.28:0,81,3364	1/1:1,20:21:54.19:1521,54,0	0/0:17,0:16:48.16:0,48,1933
chr10	50911406	.	T	TAGCTCGGTTCTGGGGCCCATCCCGTAC	2119.60	PASS	AB=0.683;AC=20;AF=0.909;AN=22;BaseQRankSum=-3.464;DP=36;FS=31.588;HRun=0;HaplotypeScore=42.1132;InbreedingCoeff=-0.2424;MQ=135.15;MQ0=0;MQRankSum=-2.153;QD=66.24;ReadPosRankSum=-1.592;VQSLOD=0.1574;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,0:1:2.99:23,3,0	./.	0/1:3,2:8:63.38:1005,0,63	0/1:4,0:6:32.39:706,0,32	./.	./.	./.	1/1:3,0:3:6.01:82,6,0	1/1:1,0:1:3:25,3,0	./.	./.	./.	1/1:2,0:2:3:25,3,0	1/1:4,0:4:6.01:74,6,0	1/1:1,0:1:3.01:50,3,0	1/1:2,0:2:6.02:102,6,0	./.	1/1:1,0:1:2.97:20,3,0	1/1:3,0:3:9:93,9,0	./.	./.	./.	./.	./.	./.	./.	./.	./.
chr10	50913342	.	CGTGTGTGTGTGTGT	C	6208.51	PASS	AB=0.792;AC=24;AF=0.444;AN=54;BaseQRankSum=10.143;DP=724;FS=9.046;HRun=0;HaplotypeScore=258.1177;InbreedingCoeff=0.4295;MQ=61.49;MQ0=11;MQRankSum=-7.299;QD=15.33;ReadPosRankSum=-1.504;VQSLOD=2.1434;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:16,16:31:4.86:402,0,5	1/1:7,5:12:12:466,12,0	./.	0/0:28,0:19:8.95:0,9,67	0/0:25,0:28:27.06:0,27,1124	1/1:11,0:25:21.07:645,21,0	0/1:23,0:23:3.37:32,0,3	0/1:20,0:30:31.96:32,0,42	1/1:9,0:28:18.95:588,19,0	0/0:26,0:30:33.05:0,33,856	0/0:12,0:13:15.04:0,15,743	0/1:9,15:24:37.06:676,0,37	0/1:14,15:31:18.78:973,0,19	0/0:20,0:23:42.11:0,42,1350	1/1:13,15:30:13.91:846,14,0	0/0:26,0:33:60.14:0,60,1936	0/0:21,0:27:33.10:0,33,1653	0/0:22,0:24:60.15:0,60,2857	0/1:16,0:16:9.31:16,0,9	1/1:22,0:33:6.02:195,6,0	0/1:30,0:29:25.53:26,0,97	0/1:10,9:20:1.93:531,0,2	1/1:18,0:18:11.16:138,11,0	1/1:18,10:28:8.84:251,9,0	0/0:23,0:26:27.07:0,27,1027	0/0:38,0:40:66.67:0,67,1929	1/1:10,0:23:11.48:390,11,0	0/0:9,0:8:18.03:0,18,420
chr10	50913375	.	GTGTGTGTGTGTGTC	G	4874.66	PASS	AB=0.969;AC=12;AF=0.214;AN=56;BaseQRankSum=11.619;DP=712;FS=19.768;HRun=0;HaplotypeScore=260.9117;InbreedingCoeff=-0.2971;MQ=49.68;MQ0=18;MQRankSum=-10.694;QD=16.47;ReadPosRankSum=8.461;VQSLOD=1.8952;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:34,0:33:99:292,0,156	0/1:9,1:10:30.28:400,0,30	0/0:19,0:2:5.95:0,6,43	0/0:35,0:10:7.03:0,7,111	0/0:37,0:36:53.44:0,53,1806	0/1:25,0:25:99:477,0,172	0/0:24,0:24:12.78:0,13,192	0/0:24,0:23:35.50:0,36,260	0/1:30,0:30:82.85:458,0,83	0/0:28,0:28:72.10:0,72,1831	0/0:23,0:23:45.06:0,45,1335	0/1:30,0:30:99:575,0,120	0/1:27,0:27:70:810,0,70	0/0:31,0:29:65.70:0,66,2122	0/1:33,0:33:99:680,0,199	0/0:32,0:32:66.91:0,67,2233	0/0:25,0:25:46.90:0,47,1975	0/0:29,0:29:76.39:0,76,3329	0/0:10,0:9:14.30:0,14,200	0/1:22,0:20:99:136,0,118	0/0:27,0:26:2.17:0,2,215	0/1:19,1:20:47.96:488,0,48	0/1:11,5:15:89.99:90,0,112	0/1:28,0:28:65:180,0,65	0/0:24,0:22:33.10:0,33,1466	0/0:33,0:33:92.15:0,92,2422	0/1:21,0:21:99:290,0,114	0/0:14,0:13:36.05:0,36,1223
chr10	50913689	.	GTC	G	624.06	PASS	AB=0.983;AC=20;AF=0.357;AN=56;BaseQRankSum=1.110;DP=905;FS=6.429;HRun=0;HaplotypeScore=168.6587;InbreedingCoeff=-0.1164;MQ=58.54;MQ0=21;MQRankSum=1.936;QD=1.17;ReadPosRankSum=2.405;VQSLOD=2.3410;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:28:6.94:7,0,74	1/1:10,0:9:5.95:42,6,0	0/0:39,0:23:0.89:0,1,2	0/0:57,0:34:0:0,0,0	0/0:19,0:19:3.48:0,3,192	0/1:26,0:25:11.57:12,0,62	0/1:28,0:27:12.71:13,0,64	0/0:53,0:50:44.38:0,44,295	0/1:37,0:36:21.54:22,0,112	0/1:37,6:41:38.16:38,0,355	0/0:22,0:22:4.11:0,4,166	0/1:43,1:41:0.38:52,0,0	1/1:32,0:29:2.38:17,2,0	0/1:37,0:37:99:114,0,407	1/1:56,0:53:1.08:132,1,0	0/1:31,1:33:36.50:37,0,307	0/1:29,0:29:0.03:0,0,303	0/1:24,1:25:67.45:67,0,184	0/0:27,0:26:9.66:0,10,111	0/0:32,0:32:32.94:0,33,270	0/0:43,0:41:11.97:0,12,97	0/1:20,0:19:6.13:19,0,6	0/1:31,0:30:32.61:68,0,33	0/1:34,0:33:4.21:109,0,4	0/1:21,0:21:24.95:25,0,131	0/0:28,0:28:38.96:0,39,343	0/0:40,0:39:6.97:0,7,308	0/0:10,0:9:12:0,12,125
chr10	50913721	.	C	CTGTG	191.57	PASS	AB=0.946;AC=8;AF=0.143;AN=56;BaseQRankSum=5.660;DP=745;FS=21.105;HRun=0;HaplotypeScore=180.4791;InbreedingCoeff=0.0234;MQ=46.83;MQ0=21;MQRankSum=-0.749;QD=0.96;ReadPosRankSum=-2.942;VQSLOD=0.5219;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:25:7.37:0,7,256	1/1:9,0:8:2.76:71,3,0	0/0:6,0:2:3.01:0,3,39	0/0:10,0:1:3.01:0,3,41	0/0:30,0:29:49.83:0,50,599	0/0:22,0:21:21.06:0,21,332	0/0:25,0:23:11.62:0,12,222	0/0:35,0:31:75.19:0,75,880	0/0:34,0:34:35.22:0,35,482	0/0:46,0:42:99:0,110,1809	0/0:23,0:23:35.70:0,36,606	0/1:39,0:36:18.79:19,0,107	0/1:34,0:31:17.05:35,0,17	0/0:35,0:34:84.28:0,84,1479	0/1:22,17:39:11.34:11,0,57	0/0:30,0:30:68.98:0,69,1116	0/0:29,0:29:63.21:0,63,1110	0/0:19,0:18:47.37:0,47,728	0/0:25,0:24:56.82:0,57,690	0/0:28,0:28:18.04:0,18,236	0/0:25,0:23:15.02:0,15,182	0/1:22,0:20:1.87:2,0,60	0/1:22,0:21:49.69:50,0,141	0/1:31,0:29:99:129,0,199	0/0:20,0:19:48.14:0,48,778	0/0:29,0:29:70.29:0,70,1431	0/0:37,0:37:63.58:0,64,724	0/0:10,0:9:24.04:0,24,375
chr10	50913723	.	C	CTGTGTGTG	485.56	PASS	AB=1.000;AC=9;AF=0.167;AN=54;BaseQRankSum=2.013;DP=730;FS=1.972;HRun=0;HaplotypeScore=217.9025;InbreedingCoeff=0.6468;MQ=46.96;MQ0=19;MQRankSum=1.661;QD=3.71;ReadPosRankSum=0.231;VQSLOD=2.6885;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:25:13.27:0,13,163	1/1:9,0:8:4.22:82,4,0	0/0:6,0:2:6.02:0,6,99	./.	0/0:28,0:27:17.75:0,18,455	0/0:21,0:21:18.50:0,19,282	0/0:25,0:23:8.34:0,8,117	0/0:34,0:30:65.78:0,66,533	0/0:34,0:34:30.38:0,30,334	0/0:45,0:41:99:0,108,1891	0/0:22,0:22:35.11:0,35,604	0/0:17,17:37:2.80:0,3,11	1/1:12,16:28:5.15:85,5,0	0/0:34,0:33:80.83:0,81,1699	0/1:37,0:34:20:20,0,25	0/0:28,0:28:39.52:0,40,1300	0/0:29,0:29:43.74:0,44,1226	0/0:21,0:20:34.47:0,34,762	0/0:26,0:25:56.80:0,57,814	0/0:28,0:28:33.27:0,33,395	0/0:22,0:20:15.87:0,16,177	0/0:8,11:21:0.47:0,0,1	1/1:22,0:21:6.79:171,7,0	1/1:31,1:31:8.32:262,8,0	0/0:22,0:21:40.49:0,40,882	0/0:27,0:27:81.25:0,81,1721	0/0:38,0:38:77.76:0,78,1034	0/0:10,0:9:26.99:0,27,536
chr10	50913725	.	CTGTGTGTGTGTG	C	1872.01	PASS	AB=0.745;AC=10;AF=0.179;AN=56;BaseQRankSum=3.958;DP=722;FS=0.755;HRun=0;HaplotypeScore=231.3228;InbreedingCoeff=0.3515;MQ=46.53;MQ0=20;MQRankSum=-2.314;QD=9.41;ReadPosRankSum=-3.611;VQSLOD=2.1060;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:27:8.86:0,9,288	0/0:10,0:9:8.44:0,8,456	0/0:6,0:2:6.02:0,6,299	0/0:5,0:2:3.01:0,3,143	0/0:27,0:26:35.65:0,36,1628	1/1:14,9:23:9.92:311,10,0	0/0:15,11:24:0.47:0,0,1	0/1:25,0:29:34.01:279,0,34	1/1:22,13:34:15.05:483,15,0	0/0:45,0:41:93.25:0,93,4165	0/0:22,0:22:15.05:0,15,757	0/0:36,0:33:12.97:0,13,255	0/0:30,0:27:3.95:0,4,157	0/0:35,0:34:63.17:0,63,3106	0/0:38,0:35:19.76:0,20,947	0/0:31,0:31:51.18:0,51,2552	0/0:29,0:29:44.68:0,45,2264	0/0:23,0:22:36.52:0,37,1378	0/1:14,0:25:99:422,0,101	0/1:18,0:25:54.65:55,0,86	1/1:20,0:20:3.90:69,4,0	0/0:18,0:16:9.02:0,9,182	0/0:22,0:21:23.11:0,23,1029	0/0:31,0:32:36.96:0,37,1275	0/0:21,0:20:42.14:0,42,2005	0/0:27,0:27:63.22:0,63,3093	0/1:20,0:36:99:402,0,289	0/0:9,0:8:21.07:0,21,1011
chr10	50914818	.	C	CAAAACAAAACA	14751.03	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=0.096;DP=565;FS=66.757;HRun=0;HaplotypeScore=155.8434;InbreedingCoeff=0.9765;MQ=67.45;MQ0=1;MQRankSum=-8.823;QD=51.04;ReadPosRankSum=0.013;VQSLOD=2.1077;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,14:24:9.57:1200,10,0	1/1:1,3:4:12.04:561,12,0	0/0:32,0:24:39.58:0,40,1034	0/0:22,0:20:18.61:0,19,804	0/0:36,0:36:96.21:0,96,2449	1/1:1,0:19:33.11:593,33,0	1/1:5,0:19:29.31:506,29,0	1/1:10,0:41:99:1833,114,0	1/1:1,0:8:24.08:406,24,0	0/0:29,0:29:72.23:0,72,2235	0/0:28,0:28:84.22:0,84,2427	1/1:1,11:16:21.07:1188,21,0	1/1:6,4:11:15.05:761,15,0	0/0:18,0:18:51.14:0,51,1282	1/1:2,13:19:27.09:1404,27,0	0/0:17,0:17:48.15:0,48,1187	0/0:25,0:25:57.18:0,57,1629	0/0:14,0:14:38.97:0,39,1049	1/1:3,0:21:63.17:1005,63,0	1/1:3,0:26:54.18:1000,54,0	1/1:1,0:9:15.05:239,15,0	1/1:2,10:15:30.10:1264,30,0	1/1:5,11:20:39.13:1929,39,0	1/1:7,11:22:12.04:512,12,0	0/0:13,0:13:36.02:0,36,859	0/0:25,0:25:66.20:0,66,1564	1/1:1,0:15:18.06:351,18,0	0/0:17,0:17:46.87:0,47,1259
chr10	50920102	.	AAT	A	165.69	PASS	AB=0.866;AC=11;AF=0.324;AN=34;BaseQRankSum=3.609;DP=243;FS=0.000;HRun=0;HaplotypeScore=43.0611;InbreedingCoeff=-0.3584;MQ=86.58;MQ0=5;MQRankSum=1.670;QD=1.22;ReadPosRankSum=0.893;VQSLOD=1.0601;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:9:2.74:0,3,12	./.	0/1:18,0:11:2.83:3,0,18	0/0:29,0:15:5.81:0,6,39	0/1:9,1:11:14.67:15,0,244	./.	./.	0/0:11,0:9:3.01:0,3,36	./.	0/1:12,2:14:47.46:47,0,263	0/1:6,2:8:20.72:21,0,176	./.	0/0:5,0:4:3:0,3,26	0/0:7,0:8:12.93:0,13,193	./.	0/0:10,0:10:3.01:0,3,30	0/1:15,3:18:59.17:59,0,539	0/1:6,2:8:23.73:24,0,131	0/0:5,0:5:1.25:0,1,3	./.	./.	./.	./.	1/1:2,0:2:2.97:20,3,0	0/1:11,1:12:11.69:12,0,306	0/1:18,1:24:44.92:45,0,550	./.	0/1:14,6:20:29.40:29,0,515
chr10	50921159	.	GAGGGAGAGAGGAAGGAAGGA	G	12551.72	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=12.550;DP=567;FS=15.997;HRun=0;HaplotypeScore=218.7023;InbreedingCoeff=0.9558;MQ=57.64;MQ0=8;MQRankSum=-12.663;QD=53.87;ReadPosRankSum=5.085;VQSLOD=2.7549;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,25:28:10.12:1260,10,0	1/1:0,4:4:6.02:337,6,0	0/0:24,0:12:29.99:0,30,586	0/0:13,0:7:12.04:0,12,344	0/0:20,0:20:60.19:0,60,3860	1/1:0,27:27:30.10:1685,30,0	1/1:12,0:12:32.93:555,33,0	0/0:31,0:29:77.93:0,78,2926	1/1:1,28:29:42.14:2358,42,0	0/0:21,0:20:60.19:0,60,3431	0/0:18,0:18:48.16:0,48,3614	1/1:0,23:23:21.07:1163,21,0	1/1:0,23:23:18.06:994,18,0	0/0:11,0:11:33.11:0,33,2453	1/1:2,19:20:24.08:1340,24,0	1/1:2,16:18:18.06:1011,18,0	0/0:28,0:28:81.28:0,81,5743	0/0:22,0:21:60.19:0,60,4562	0/0:28,0:25:66.22:0,66,3728	0/0:18,0:17:45.15:0,45,3168	0/0:12,0:11:30.05:0,30,1383	1/1:0,16:16:14.98:671,15,0	1/1:0,10:10:9.03:505,9,0	1/1:0,22:22:12.04:673,12,0	0/0:18,0:18:51.16:0,51,3781	0/0:31,0:31:93.31:0,93,6812	0/0:28,0:27:78.25:0,78,5665	0/0:9,0:8:21.07:0,21,1713
chr10	50921164	.	AGAG	A	1513.99	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=13.580;DP=555;FS=18.121;HRun=0;HaplotypeScore=113.8502;InbreedingCoeff=0.9413;MQ=54.34;MQ0=8;MQRankSum=-12.435;QD=6.55;ReadPosRankSum=5.419;VQSLOD=1.0900;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:28:29.08:233,29,0	1/1:5,0:5:2.24:36,2,0	0/0:22,0:8:23.94:0,24,447	0/0:12,0:6:12.04:0,12,267	0/0:19,0:19:57.20:0,57,1389	1/1:27,0:27:29.76:210,30,0	1/1:5,6:11:11.33:169,11,0	0/0:31,0:29:77.03:0,77,1701	1/1:28,1:29:41.66:293,42,0	0/0:24,0:23:69.23:0,69,1612	0/0:17,0:17:48.16:0,48,1164	1/1:23,0:23:20.83:147,21,0	1/1:23,0:23:17.86:126,18,0	0/0:14,0:14:42.14:0,42,953	1/1:20,0:20:23.76:164,24,0	1/1:16,0:16:17.86:126,18,0	0/0:28,0:28:84.29:0,84,2000	0/0:21,0:20:60.17:0,60,1387	0/0:27,0:24:66.23:0,66,1579	0/0:16,0:15:45.14:0,45,1037	0/0:8,0:7:24.08:0,24,570	1/1:16,0:16:11.90:84,12,0	1/1:10,0:10:8.93:63,9,0	1/1:22,0:22:11.91:85,12,0	0/0:17,0:17:51.16:0,51,1203	0/0:32,0:32:96.33:0,96,2290	0/0:28,0:27:84.29:0,84,1972	0/0:8,0:7:21.07:0,21,507
chr10	50921484	.	A	AG	1621.08	PASS	AB=0.872;AC=18;AF=0.321;AN=56;BaseQRankSum=11.083;DP=478;FS=166.945;HRun=1;HaplotypeScore=116.3094;InbreedingCoeff=-0.4820;MQ=37.58;MQ0=8;MQRankSum=-9.123;QD=4.82;ReadPosRankSum=1.009;VQSLOD=0.3060;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:20:20:0,20,442	0/1:5,0:6:34.39:34,0,91	0/0:9,0:2:3.01:0,3,39	0/0:19,0:4:9.03:0,9,116	0/1:17,3:20:68.56:69,0,331	0/1:17,0:19:99:106,0,330	0/1:24,0:25:99:195,0,506	0/1:12,2:10:63.59:64,0,113	0/1:12,0:11:13.04:13,0,227	0/1:25,6:25:99:243,0,391	0/1:12,1:13:31.65:32,0,243	0/1:18,0:19:12.65:13,0,472	0/1:9,0:9:60.90:61,0,170	0/1:19,12:29:94.12:94,0,463	0/0:20,0:19:19.87:0,20,464	0/1:19,0:19:16.72:17,0,471	0/0:19,2:20:12.78:0,13,547	0/0:12,0:11:33.11:0,33,425	0/1:12,3:13:91.13:91,0,136	0/1:14,8:23:99:240,0,243	0/0:10,0:21:38.65:0,39,361	0/0:8,0:8:23.87:0,24,248	0/0:6,0:6:15.05:0,15,194	0/1:16,0:16:1.50:2,0,425	0/1:13,8:21:99:148,0,189	0/1:15,9:23:99:277,0,351	0/1:10,4:14:79.81:80,0,188	0/0:5,0:3:6.02:0,6,78
chr10	50921519	.	G	GGAA	260.60	PASS	AB=0.986;AC=13;AF=0.241;AN=54;BaseQRankSum=5.286;DP=321;FS=17.737;HRun=0;HaplotypeScore=115.5195;InbreedingCoeff=-0.2244;MQ=33.00;MQ0=0;MQRankSum=-2.049;QD=1.69;ReadPosRankSum=2.784;VQSLOD=1.0043;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:32.69:0,33,399	0/0:4,0:4:11.96:0,12,149	./.	0/0:4,0:1:3.01:0,3,53	0/1:15,0:15:41.38:41,0,155	0/1:11,0:11:12.61:13,0,118	0/0:16,0:16:39.05:0,39,410	0/1:11,0:8:19.38:19,0,91	0/1:10,0:9:7.80:8,0,198	0/1:24,1:21:3.31:3,0,287	0/0:7,1:8:15.69:0,16,211	0/0:12,0:11:27.81:0,28,258	0/0:8,0:7:11.46:0,11,99	0/0:20,0:20:1.30:0,1,383	0/0:17,0:17:8.41:0,8,425	0/0:20,0:20:11.46:0,11,517	0/0:12,0:11:2.04:0,2,239	0/1:6,0:5:18.06:18,0,106	0/1:12,0:12:56.36:56,0,230	0/1:18,1:18:36.92:37,0,155	0/1:17,0:17:23.23:23,0,414	0/0:8,0:8:1.33:0,1,78	0/1:9,0:9:29.61:30,0,58	0/0:8,0:8:6.24:0,6,120	0/0:15,0:15:6:0,6,251	0/1:14,1:14:92.68:93,0,149	1/1:3,1:4:6.01:59,6,0	0/0:1,0:1:2.50:0,2,9
chr10	50925895	.	C	CA	1606.47	PASS	AB=1.000;AC=32;AF=0.571;AN=56;BaseQRankSum=5.248;DP=454;FS=2.519;HRun=0;HaplotypeScore=140.0007;InbreedingCoeff=0.6957;MQ=63.43;MQ0=5;MQRankSum=-0.926;QD=6.02;ReadPosRankSum=1.359;VQSLOD=3.4046;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:19:5.57:32,6,0	1/1:10,0:10:11.25:69,11,0	0/0:22,0:13:9.17:0,9,208	0/0:26,0:20:29.76:0,30,244	0/0:6,0:6:12:0,12,131	1/1:19,0:19:18.12:109,18,0	1/1:13,0:13:0.16:17,0,0	1/1:13,5:17:17.11:202,17,0	1/1:13,0:13:2.36:42,2,0	0/0:14,0:13:20.94:0,21,186	0/0:11,0:11:20.59:0,21,159	1/1:20,0:20:10.53:86,11,0	0/1:8,0:8:8.93:24,0,9	0/0:18,0:18:38.32:0,38,342	1/1:14,0:14:8.48:58,8,0	1/1:10,0:10:10.08:66,10,0	0/0:42,0:41:99:0,106,1085	0/0:13,0:13:29.77:0,30,305	1/1:13,3:16:29.78:315,30,0	1/1:5,13:18:9.85:134,10,0	1/1:8,19:26:5.55:81,6,0	1/1:10,0:10:2.99:24,3,0	1/1:10,0:10:5.88:41,6,0	0/1:19,0:19:0:0,0,0	0/0:16,0:16:30.02:0,30,326	0/0:10,0:9:0.37:0,0,44	1/1:2,20:20:39.11:501,39,0	0/0:8,0:8:18.03:0,18,204
chr10	50926639	.	AGT	A	7393.50	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=19.075;DP=656;FS=52.942;HRun=0;HaplotypeScore=181.5631;InbreedingCoeff=0.9942;MQ=74.96;MQ0=0;MQRankSum=-17.619;QD=30.30;ReadPosRankSum=1.108;VQSLOD=3.1947;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,14:22:39.13:542,39,0	1/1:3,12:15:36.12:501,36,0	0/0:18,0:18:48.13:0,48,777	0/0:17,0:17:36.98:0,37,569	0/0:28,0:27:72.23:0,72,1290	1/1:2,15:17:45.15:627,45,0	1/1:5,6:11:18.06:249,18,0	0/0:36,0:36:99:0,102,1824	1/1:4,19:23:60.20:837,60,0	0/0:34,0:34:99:0,99,1804	0/0:21,0:21:60.21:0,60,1099	1/1:5,10:15:30.10:417,30,0	1/1:7,15:22:48.16:669,48,0	0/0:27,0:27:78.27:0,78,1411	1/1:8,12:20:36.12:502,36,0	1/1:4,17:21:51.17:702,51,0	0/0:25,0:25:72.25:0,72,1320	0/0:10,0:10:30.10:0,30,532	0/0:31,0:31:90.30:0,90,1590	0/0:34,0:34:99:0,99,1783	0/0:40,0:40:99:0,117,2119	1/1:6,32:38:90.30:1246,90,0	1/1:6,23:29:69.20:936,69,0	1/1:5,6:11:12.04:165,12,0	0/0:29,0:29:84.29:0,84,1540	0/0:32,0:32:90.31:0,90,1650	0/0:21,0:21:60.21:0,60,1089	0/0:9,0:9:27.09:0,27,494
chr10	50926648	.	ACTATGTGGAT	A	17448.47	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=19.094;DP=601;FS=44.775;HRun=0;HaplotypeScore=233.2495;InbreedingCoeff=0.9938;MQ=75.84;MQ0=0;MQRankSum=-18.209;QD=96.40;ReadPosRankSum=3.925;VQSLOD=3.2910;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,14:14:42.10:1238,42,0	1/1:0,12:12:36.12:1221,36,0	0/0:21,0:21:63.22:0,63,2711	0/0:12,0:12:29.67:0,30,1236	0/0:29,0:29:87.28:0,87,4343	1/1:0,15:15:45.15:1536,45,0	1/1:0,6:6:18.06:609,18,0	0/0:37,0:37:99:0,111,5168	1/1:0,20:20:60.21:2090,60,0	0/0:30,0:30:90.31:0,90,4877	0/0:23,0:23:69.22:0,69,3563	1/1:1,9:10:30.09:932,30,0	1/1:0,15:15:45.15:1567,45,0	0/0:27,0:27:81.28:0,81,3974	1/1:0,12:12:33.11:1111,33,0	1/1:1,16:17:51.17:1712,51,0	0/0:27,0:27:81.28:0,81,4328	0/0:11,0:11:33.07:0,33,1389	0/0:27,0:27:78.26:0,78,3637	0/0:36,0:36:99:0,108,5705	0/0:42,0:42:99:0,126,6565	1/1:1,29:30:90.14:2958,90,0	1/1:0,24:24:69.14:2094,69,0	1/1:0,6:6:11.59:381,12,0	0/0:29,0:29:87.30:0,87,4489	0/0:37,0:37:99:0,111,5722	0/0:23,0:23:69.24:0,69,3385	0/0:9,0:9:27.09:0,27,1265
chr10	50926658	.	T	TCA	6680.25	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=19.321;DP=699;FS=21.022;HRun=0;HaplotypeScore=199.9672;InbreedingCoeff=0.9977;MQ=74.39;MQ0=1;MQRankSum=-18.760;QD=26.40;ReadPosRankSum=1.857;VQSLOD=3.7791;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:22:38:363,38,0	1/1:15,1:16:43.68:569,44,0	0/0:22,0:22:62.42:0,62,943	0/0:14,0:14:38.72:0,39,621	0/0:28,0:28:84.29:0,84,1370	1/1:22,0:22:49.69:581,50,0	1/1:9,0:9:24.05:303,24,0	0/0:39,0:39:99:0,117,1859	1/1:27,0:27:75.05:836,75,0	0/0:34,0:34:99:0,99,1582	0/0:29,0:29:81.26:0,81,1290	1/1:17,1:17:40.27:426,40,0	1/1:18,0:18:51.12:589,51,0	0/0:24,0:24:69.23:0,69,1114	1/1:20,0:20:40.24:406,40,0	1/1:18,0:18:54.14:666,54,0	0/0:31,0:31:90.28:0,90,1441	0/0:11,0:11:30.08:0,30,452	0/0:31,0:31:93.29:0,93,1484	0/0:40,0:40:99:0,117,1909	0/0:43,0:43:99:0,126,2055	1/1:35,0:35:94.09:980,94,0	1/1:32,1:33:74.44:764,74,0	1/1:13,2:15:16.10:198,16,0	0/0:29,0:29:87.28:0,87,1385	0/0:40,0:40:99:0,114,1858	0/0:22,0:22:66.21:0,66,1051	0/0:9,0:9:27.09:0,27,441
chr10	50927407	.	GCTCTCT	G	438.76	PASS	AB=1.000;AC=13;AF=0.295;AN=44;BaseQRankSum=-0.323;DP=488;FS=28.421;HRun=0;HaplotypeScore=114.4483;InbreedingCoeff=0.5484;MQ=62.75;MQ0=11;MQRankSum=-2.828;QD=4.22;ReadPosRankSum=3.322;VQSLOD=-0.1789;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:25:6.02:0,6,104	0/0:14,0:14:9.03:0,9,203	./.	./.	./.	0/0:22,0:22:15.05:0,15,389	0/0:20,0:20:18.06:0,18,400	0/0:27,0:26:18:0,18,227	0/0:18,0:17:20.97:0,21,511	0/0:12,4:15:2.67:0,3,74	./.	1/1:11,0:10:5.98:74,6,0	1/1:17,0:16:3.14:21,3,0	1/1:3,9:13:6.02:102,6,0	0/0:29,0:28:9.03:0,9,201	0/0:18,0:18:15.04:0,15,271	0/0:19,0:22:19.63:0,20,337	1/1:11,5:16:8.89:160,9,0	0/0:15,0:14:3.95:0,4,79	0/0:21,0:21:3.01:0,3,94	0/0:18,0:17:9.03:0,9,261	0/0:10,0:10:3:0,3,25	./.	0/1:20,0:18:16:16,0,17	1/1:14,0:14:2.55:27,3,0	./.	0/0:24,0:23:13.78:0,14,430	1/1:8,5:12:9.03:182,9,0
chr10	50927467	.	AT	A	4741.91	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=12.073;DP=440;FS=4.087;HRun=7;HaplotypeScore=71.4854;InbreedingCoeff=0.9985;MQ=75.02;MQ0=1;MQRankSum=1.070;QD=25.91;ReadPosRankSum=1.091;VQSLOD=5.6231;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,22:24:60.13:612,60,0	1/1:1,11:12:33.08:337,33,0	0/0:21,0:17:44.32:0,44,483	0/0:16,0:12:30.07:0,30,352	0/0:18,0:18:54.17:0,54,679	1/1:0,13:13:36.08:367,36,0	1/1:2,11:13:30.06:306,30,0	0/0:21,0:21:60.18:0,60,744	1/1:1,16:17:47.44:489,47,0	0/0:11,0:11:33.10:0,33,404	0/0:10,0:10:30.09:0,30,366	1/1:0,14:14:36.08:367,36,0	1/1:2,12:14:33.07:336,33,0	0/0:20,0:20:48.03:0,48,550	1/1:2,20:22:57.13:582,57,0	1/1:0,10:10:27.06:275,27,0	0/0:16,0:16:45.07:0,45,499	0/0:19,0:19:45.14:0,45,566	0/0:7,0:7:21.06:0,21,254	0/0:13,0:13:39.12:0,39,491	0/0:20,0:20:54.14:0,54,661	1/1:1,14:15:42.10:429,42,0	1/1:2,9:11:24.05:245,24,0	1/1:1,17:18:38.60:398,39,0	0/0:15,0:15:45.14:0,45,566	0/0:12,0:12:30.10:0,30,377	0/0:24,0:24:69.19:0,69,831	0/0:14,0:14:36.09:0,36,436
chr10	50928083	.	AAT	A	5380.62	PASS	AB=0.948;AC=27;AF=0.482;AN=56;BaseQRankSum=13.003;DP=643;FS=2.513;HRun=0;HaplotypeScore=158.9123;InbreedingCoeff=0.7933;MQ=63.86;MQ0=10;MQRankSum=1.317;QD=14.99;ReadPosRankSum=-0.660;VQSLOD=4.8001;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:25:52.97:664,53,0	1/1:4,1:6:17.67:185,18,0	0/0:38,0:25:63.04:0,63,1228	0/1:46,0:28:21.07:21,0,709	0/0:21,0:21:54.18:0,54,998	1/1:18,4:24:30.55:380,31,0	1/1:18,2:21:41.44:413,41,0	0/1:39,4:41:89.47:89,0,1492	1/1:15,4:23:42.19:556,42,0	0/0:21,0:21:60.21:0,60,1159	0/0:13,0:13:31.96:0,32,605	1/1:12,1:14:24.91:346,25,0	1/1:21,3:23:39.42:538,39,0	0/0:24,0:24:72.24:0,72,1376	1/1:27,0:28:25.85:254,26,0	1/1:9,6:19:41.72:476,42,0	0/0:19,0:19:51.14:0,51,979	0/0:18,0:18:51.17:0,51,997	0/1:12,1:13:8.13:8,0,529	0/0:11,0:11:30.10:0,30,553	0/0:32,0:31:88.50:0,88,1368	1/1:24,2:27:41.92:533,42,0	1/1:15,3:18:31.22:453,31,0	1/1:23,3:26:42.27:464,42,0	0/0:21,0:21:63:0,63,1208	0/0:28,0:28:84.22:0,84,1641	0/0:29,0:28:78.81:0,79,1405	0/0:9,0:9:24.08:0,24,420
chr10	50928084	.	AT	A	468.13	PASS	AB=0.931;AC=21;AF=0.375;AN=56;BaseQRankSum=15.273;DP=644;FS=2.902;HRun=1;HaplotypeScore=169.5432;InbreedingCoeff=0.7071;MQ=63.93;MQ0=10;MQRankSum=0.504;QD=1.84;ReadPosRankSum=0.826;VQSLOD=-0.7651;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:23:28.55:88,29,0	0/1:5,1:6:11.72:12,0,23	0/0:38,0:25:75.22:0,75,1140	0/0:46,0:31:45.62:0,46,771	0/0:21,0:21:54.08:0,54,808	1/1:22,2:24:15.94:80,16,0	1/1:20,1:21:1.04:44,1,0	0/0:44,0:42:99:0,107,1688	1/1:19,4:23:5.37:61,5,0	0/0:21,0:21:60.20:0,60,956	0/0:13,0:13:33.07:0,33,513	1/1:12,1:13:9.89:48,10,0	0/1:24,0:23:26.41:40,0,26	0/0:24,0:24:72.25:0,72,1141	0/1:27,2:28:6.85:39,0,7	1/1:15,4:19:17.32:66,17,0	0/0:19,0:19:48.16:0,48,765	0/0:18,0:18:53.21:0,53,817	0/0:14,0:14:37:0,37,552	0/0:11,0:11:30.10:0,30,479	0/0:32,0:31:90.31:0,90,1422	1/1:26,1:27:10.90:60,11,0	1/1:19,0:19:13.52:78,14,0	1/1:26,0:26:10.06:53,10,0	0/0:22,0:22:63.14:0,63,958	0/0:28,0:28:84.28:0,84,1326	0/0:28,0:27:81.27:0,81,1277	0/0:9,0:9:24.08:0,24,383
chr10	50928142	.	G	GTGTGTA	4388.74	PASS	AB=1.000;AC=25;AF=0.446;AN=56;BaseQRankSum=8.944;DP=687;FS=4.978;HRun=0;HaplotypeScore=197.0458;InbreedingCoeff=0.8684;MQ=57.65;MQ0=14;MQRankSum=-0.812;QD=13.93;ReadPosRankSum=-0.933;VQSLOD=3.5744;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:25:32.79:350,33,0	1/1:8,0:8:11.84:159,12,0	0/0:41,0:24:35.81:0,36,304	0/0:42,0:20:25.31:0,25,314	0/0:27,0:26:11.02:0,11,239	1/1:28,2:30:51.05:739,51,0	1/1:30,0:29:47.37:513,47,0	0/0:36,0:34:59.68:0,60,489	1/1:20,3:23:23.27:645,23,0	0/0:22,0:21:30.81:0,31,362	0/0:6,0:6:8.91:0,9,65	1/1:19,0:17:19.08:214,19,0	1/1:29,0:29:57.76:482,58,0	0/0:34,0:34:34.31:0,34,436	1/1:6,22:31:17.70:463,18,0	1/1:7,15:29:17.96:419,18,0	0/0:14,0:14:19.46:0,19,98	0/1:16,0:16:13.10:13,0,203	0/0:17,0:16:32.55:0,33,246	0/0:16,0:15:27:0,27,308	0/0:41,0:41:67.15:0,67,780	1/1:17,0:17:15.31:132,15,0	1/1:19,0:19:9.83:140,10,0	1/1:38,0:37:14.95:118,15,0	0/0:20,0:20:1.91:0,2,147	0/0:29,0:29:50.07:0,50,536	0/0:19,0:18:32.81:0,33,270	0/0:8,0:8:20.55:0,21,160
chr10	50928148	.	A	ATGTG	2477.66	PASS	AB=0.878;AC=35;AF=0.673;AN=52;BaseQRankSum=2.775;DP=715;FS=3.048;HRun=0;HaplotypeScore=181.1632;InbreedingCoeff=0.0432;MQ=54.18;MQ0=18;MQRankSum=1.089;QD=4.42;ReadPosRankSum=1.721;VQSLOD=2.8756;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:25:9.01:174,9,0	1/1:7,0:8:6.02:110,6,0	./.	0/0:38,0:16:0:0,0,0	1/1:17,11:28:3.01:70,3,0	0/1:33,0:33:7.11:346,0,7	0/1:31,0:31:55.67:56,0,67	0/0:38,0:34:2.46:0,2,13	0/1:27,1:27:3.01:318,0,3	0/1:18,0:24:13.86:95,0,14	0/0:5,0:5:1.25:0,1,3	1/1:19,0:17:14.53:119,15,0	1/1:31,0:31:17.99:149,18,0	1/1:25,11:37:3.90:72,4,0	1/1:31,0:31:15.94:237,16,0	1/1:32,0:32:20.57:293,21,0	0/1:2,0:15:24.38:53,0,24	0/1:12,8:22:10.33:163,0,10	./.	0/0:15,0:15:4.28:0,4,131	0/1:42,0:43:5.77:6,0,182	1/1:15,0:15:6.41:45,6,0	1/1:18,0:18:5.95:67,6,0	0/1:36,0:35:0:1,0,0	1/1:11,1:19:7.04:89,7,0	1/1:24,0:32:21.45:121,21,0	0/1:20,0:19:11.15:11,0,36	1/1:8,0:8:3.40:18,3,0
chr10	50928385	.	GT	G	4464.53	PASS	AB=0.775;AC=25;AF=0.446;AN=56;BaseQRankSum=0.384;DP=516;FS=13.529;HRun=11;HaplotypeScore=77.9949;InbreedingCoeff=0.7693;MQ=70.36;MQ0=0;MQRankSum=-0.272;QD=15.89;ReadPosRankSum=4.365;VQSLOD=4.4276;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,34:36:86.79:703,87,0	1/1:0,7:7:20.98:172,21,0	0/1:15,4:19:63.19:63,0,249	0/1:17,1:15:0.82:1,0,147	0/0:23,2:25:16.73:0,17,533	1/1:3,19:22:50.85:406,51,0	1/1:2,22:24:50.93:419,51,0	0/0:13,0:24:51.76:0,52,311	1/1:4,17:21:41.84:334,42,0	0/0:23,1:24:38.50:0,38,603	0/0:10,1:12:2.22:0,2,187	1/1:5,13:19:15.06:297,15,0	1/1:3,16:19:41.94:344,42,0	0/0:18,0:18:45.06:0,45,466	1/1:1,24:26:64.91:517,65,0	1/1:4,10:14:17.94:148,18,0	0/0:25,1:26:35.41:0,35,555	0/0:13,0:13:36:0,36,358	0/0:1,0:9:22.41:0,22,109	0/0:4,0:15:28.53:0,29,145	0/0:4,0:12:22.86:0,23,117	1/1:2,19:21:56.89:462,57,0	0/1:3,12:16:13.62:230,0,14	1/1:1,18:19:44.95:369,45,0	0/0:15,1:16:5.34:0,5,227	0/0:14,0:14:36.07:0,36,372	0/0:8,0:18:37.31:0,37,203	0/0:9,0:9:27.03:0,27,271
chr10	50931225	.	TGG	T	2984.79	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-1.572;DP=647;FS=5.980;HRun=9;HaplotypeScore=102.1104;InbreedingCoeff=0.9753;MQ=70.12;MQ0=7;MQRankSum=-1.441;QD=20.73;ReadPosRankSum=3.845;VQSLOD=2.6173;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:33:59.52:0,60,208	1/1:1,10:11:24.07:278,24,0	0/0:38,0:31:5.31:0,5,558	0/0:26,0:24:44.71:0,45,592	0/0:18,0:18:45.04:0,45,570	1/1:4,34:38:55.91:837,56,0	1/1:3,19:22:36.10:419,36,0	0/0:5,0:24:53.56:0,54,466	1/1:1,19:20:30.08:347,30,0	0/0:21,0:21:42.14:0,42,684	0/0:21,0:23:50.12:0,50,684	0/0:6,0:33:45.51:0,46,224	0/0:5,0:24:51.72:0,52,181	0/0:21,0:21:57.11:0,57,833	1/1:2,27:29:57.17:663,57,0	1/1:2,22:24:54.16:628,54,0	0/0:23,0:23:60.14:0,60,862	0/0:22,0:22:63.14:0,63,922	0/0:7,0:13:32.97:0,33,308	0/0:2,0:16:32.91:0,33,294	0/0:17,0:21:39.03:0,39,379	0/0:2,0:19:37.84:0,38,139	0/0:5,0:17:29.70:0,30,104	0/0:10,0:24:37.41:0,37,132	0/0:15,0:15:36.06:0,36,514	0/0:24,0:24:60.20:0,60,959	0/0:8,0:26:50.88:0,51,530	0/0:11,0:11:33.10:0,33,504
chr10	50931619	.	C	CCAT	13547.10	PASS	AB=0.574;AC=22;AF=0.393;AN=56;BaseQRankSum=-17.718;DP=925;FS=6.882;HRun=0;HaplotypeScore=120.8237;InbreedingCoeff=0.8552;MQ=63.35;MQ0=5;MQRankSum=0.907;QD=32.03;ReadPosRankSum=5.758;VQSLOD=5.1265;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,35:43:78.27:1579,78,0	0/1:5,15:21:12.80:514,0,13	0/0:37,0:27:41.81:0,42,469	0/0:31,0:29:23.06:0,23,264	0/0:30,0:30:81.25:0,81,1127	1/1:6,29:37:60.21:1192,60,0	1/1:6,23:29:42.14:828,42,0	0/0:36,0:36:47.99:0,48,602	1/1:4,28:32:45.15:911,45,0	0/0:37,0:36:84.21:0,84,1109	0/0:32,0:31:79.49:0,79,1094	1/1:4,30:34:69.24:1397,69,0	0/1:12,31:43:16.34:1180,0,16	0/0:40,0:40:99:0,102,1336	1/1:12,39:52:75.26:1496,75,0	1/1:4,33:37:72.25:1458,72,0	0/0:27,0:27:57.65:0,58,793	0/0:22,0:22:60.16:0,60,821	0/0:17,0:16:33.04:0,33,427	0/0:41,0:41:96.26:0,96,1289	0/0:62,0:62:99:0,137,2069	1/1:9,20:29:42.14:848,42,0	1/1:2,28:30:42.02:826,42,0	1/1:7,28:35:66.23:1318,66,0	0/0:14,0:14:36.10:0,36,480	0/0:36,0:35:90.22:0,90,1231	0/0:30,0:30:72.23:0,72,1006	0/0:10,0:10:24.07:0,24,325
chr10	50933922	.	AT	A	5478.79	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=15.401;DP=534;FS=14.571;HRun=7;HaplotypeScore=65.7774;InbreedingCoeff=0.9872;MQ=73.64;MQ0=1;MQRankSum=0.168;QD=26.73;ReadPosRankSum=4.600;VQSLOD=4.1364;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,25:28:75.17:765,75,0	1/1:0,6:6:18.04:183,18,0	0/0:17,1:13:8.05:0,8,316	0/0:16,0:16:23.91:0,24,251	0/0:29,0:29:84.27:0,84,1053	1/1:0,16:16:48.11:490,48,0	1/1:0,17:17:42.10:428,42,0	0/0:30,0:30:84.26:0,84,1046	1/1:0,16:16:48.11:490,48,0	0/0:25,0:25:66.21:0,66,830	0/0:26,0:26:72.23:0,72,905	1/1:0,15:15:36.08:367,36,0	1/1:1,13:14:39.09:398,39,0	0/0:12,0:12:36.10:0,36,440	1/1:4,21:25:60.13:612,60,0	1/1:2,12:14:27.06:276,27,0	0/0:17,0:17:48.15:0,48,603	0/0:21,0:21:54.17:0,54,678	0/0:14,0:14:33.11:0,33,415	0/0:22,0:22:63.19:0,63,779	0/0:7,0:7:18.06:0,18,226	1/1:0,13:13:33.07:337,33,0	1/1:0,21:21:63.14:643,63,0	1/1:2,18:20:48.11:490,48,0	0/0:24,0:24:69.21:0,69,853	0/0:28,0:28:84.26:0,84,1045	0/0:29,0:28:72.22:0,72,893	0/0:10,0:10:26.82:0,27,314
chr10	50934954	.	G	GT	12328.23	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=20.752;DP=850;FS=11.358;HRun=3;HaplotypeScore=106.4625;InbreedingCoeff=0.9999;MQ=85.67;MQ0=0;MQRankSum=-5.112;QD=34.25;ReadPosRankSum=3.334;VQSLOD=4.0932;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,35:35:96.32:1344,96,0	1/1:3,14:17:45.07:587,45,0	0/0:30,0:30:75.23:0,75,899	0/0:28,0:28:81.20:0,81,943	0/0:42,0:42:99:0,111,1329	1/1:1,20:21:57.11:754,57,0	1/1:3,28:31:66.17:901,66,0	0/0:41,0:41:99:0,114,1327	1/1:2,28:29:72.24:1007,72,0	0/0:36,0:36:99:0,105,1250	0/0:23,0:23:66.19:0,66,779	1/1:4,32:36:99:1379,99,0	1/1:3,31:33:72.20:985,72,0	0/0:23,0:23:63.19:0,63,755	1/1:1,33:34:84.28:1175,84,0	1/1:5,35:40:87.29:1218,87,0	0/0:31,0:31:87.27:0,87,1044	0/0:19,0:19:57.12:0,57,655	0/0:27,0:27:78.20:0,78,907	0/0:23,0:23:63.19:0,63,755	0/0:40,0:40:99:0,105,1221	1/1:2,26:28:78.26:1089,78,0	1/1:5,17:22:48.16:672,48,0	1/1:0,32:32:87.29:1218,87,0	0/0:37,0:37:99:0,105,1259	0/0:37,0:37:99:0,99,1174	0/0:42,0:41:99:0,126,1496	0/0:11,0:11:30.09:0,30,360
chr10	50936309	.	T	TAA	7716.65	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=10.194;DP=731;FS=2.031;HRun=1;HaplotypeScore=93.7021;InbreedingCoeff=0.9998;MQ=88.00;MQ0=0;MQRankSum=-3.700;QD=52.49;ReadPosRankSum=2.947;VQSLOD=4.9431;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,22:23:66.23:1340,66,0	0/0:15,0:15:45.15:0,45,734	0/0:23,0:23:48.49:0,48,1030	0/0:29,0:29:83.21:0,83,1216	0/0:29,0:29:87.28:0,87,1389	0/0:24,0:24:72.23:0,72,1149	0/0:22,0:22:63.22:0,63,1027	0/0:43,0:43:99:0,123,1961	0/0:20,0:20:60.19:0,60,942	0/0:37,0:37:99:0,111,1762	0/0:28,0:28:84.27:0,84,1322	1/1:0,39:40:99:2134,105,0	1/1:0,20:22:60.21:1218,60,0	0/0:33,0:33:96.31:0,96,1537	0/0:27,0:27:81.28:0,81,1321	0/0:25,0:25:72.20:0,72,1102	0/0:22,0:22:63.22:0,63,1027	0/0:19,0:19:57.19:0,57,928	0/0:19,0:19:57.18:0,57,883	0/0:35,0:35:99:0,105,1637	0/0:31,0:31:90.29:0,90,1442	1/1:0,22:24:60.16:1177,60,0	1/1:0,24:24:66.05:1299,66,0	1/1:0,14:14:27.03:549,27,0	0/0:22,0:22:63.19:0,63,981	0/0:38,0:38:99:0,114,1814	0/0:30,0:30:84.27:0,84,1343	0/0:13,0:13:39.13:0,39,636
chr10	50936804	.	AT	A	5999.01	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=13.133;DP=731;FS=1.872;HRun=2;HaplotypeScore=104.3243;InbreedingCoeff=0.9964;MQ=87.98;MQ0=0;MQRankSum=-4.346;QD=35.50;ReadPosRankSum=-0.101;VQSLOD=4.6545;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:57.18:0,57,834	1/1:0,16:16:45.15:584,45,0	0/0:31,0:31:90.25:0,90,1245	0/0:23,0:23:63.07:0,63,796	0/0:31,0:31:93.31:0,93,1391	1/1:2,32:34:93.29:1193,93,0	1/1:4,13:17:51.14:632,51,0	0/0:32,0:32:96.32:0,96,1433	1/1:2,19:21:48.16:623,48,0	0/0:35,0:35:99:0,99,1458	0/0:31,0:31:93.27:0,93,1367	0/0:18,0:18:54.18:0,54,807	0/0:28,0:28:81.26:0,81,1192	0/0:19,0:19:57.19:0,57,854	1/1:1,50:51:99:1932,150,0	1/1:4,26:30:81.25:1035,81,0	0/0:23,0:23:66.22:0,66,987	0/0:6,0:6:15.05:0,15,215	0/0:19,0:19:57.17:0,57,802	0/0:23,0:23:66.20:0,66,949	0/0:28,0:28:81.27:0,81,1207	0/0:23,0:23:66.21:0,66,969	0/0:22,0:22:57.19:0,57,851	0/0:33,0:32:96.31:0,96,1416	0/0:32,0:32:96.33:0,96,1439	0/0:29,0:29:81.27:0,81,1211	0/0:44,0:44:99:0,129,1912	0/0:9,0:9:24.08:0,24,360
chr10	50936866	.	A	ATC	16728.40	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-10.416;DP=699;FS=0.280;HRun=0;HaplotypeScore=82.8687;InbreedingCoeff=0.9976;MQ=72.36;MQ0=1;MQRankSum=-4.645;QD=53.11;ReadPosRankSum=4.148;VQSLOD=5.6889;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,13:15:35.61:636,36,0	1/1:0,20:20:60.21:1158,60,0	0/0:20,0:20:54.17:0,54,798	0/0:26,0:25:75.24:0,75,1116	0/0:28,0:28:84.27:0,84,1262	1/1:1,28:30:81.26:1526,81,0	1/1:2,19:22:60.19:1112,60,0	0/0:37,0:37:99:0,108,1617	1/1:1,16:17:51.17:951,51,0	0/0:31,0:31:87.30:0,87,1331	0/0:20,0:20:60.20:0,60,919	1/1:1,26:27:75.26:1449,75,0	1/1:2,22:24:69.24:1309,69,0	0/0:18,0:18:51.17:0,51,780	1/1:1,43:44:99:2234,117,0	1/1:0,36:36:99:2078,108,0	0/0:25,0:25:75.25:0,75,1145	0/0:9,0:9:27.09:0,27,413	0/0:26,0:26:69.22:0,69,1036	0/0:25,0:25:69.22:0,69,1036	0/0:18,0:18:51.17:0,51,781	1/1:1,20:22:63.22:1196,63,0	1/1:0,30:30:78.27:1486,78,0	1/1:2,26:27:84.29:1593,84,0	0/0:19,0:19:57.19:0,57,873	0/0:38,0:38:99:0,105,1563	0/0:39,0:39:99:0,108,1588	0/0:5,0:5:15.05:0,15,222
chr10	50937786	.	CTT	C	1361.70	PASS	AB=0.784;AC=10;AF=0.179;AN=56;BaseQRankSum=-0.606;DP=481;FS=13.590;HRun=14;HaplotypeScore=77.8129;InbreedingCoeff=0.8186;MQ=64.46;MQ0=14;MQRankSum=1.188;QD=11.54;ReadPosRankSum=0.703;VQSLOD=1.0007;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:19:47.72:0,48,459	0/0:6,0:8:17.98:0,18,196	0/1:18,0:12:1.93:2,0,134	0/0:9,0:5:9.03:0,9,102	0/0:20,1:21:24.42:0,24,441	0/0:16,0:17:41.47:0,41,471	0/0:10,0:13:10.05:0,10,246	1/1:11,19:31:45.15:512,45,0	0/0:7,0:8:18.05:0,18,239	0/0:24,0:26:44.57:0,45,529	0/0:16,0:16:38.36:0,38,462	0/0:5,0:14:26.92:0,27,247	0/0:8,0:17:23.89:0,24,188	0/0:22,0:21:53.93:0,54,627	0/0:17,0:19:38.09:0,38,461	0/0:15,1:18:16.18:0,16,427	0/0:22,0:24:56.60:0,57,714	0/0:19,0:19:46.29:0,46,558	1/1:5,11:17:35.39:292,35,0	1/1:2,14:19:39.34:330,39,0	1/1:1,4:9:20.47:160,20,0	0/0:8,0:14:32.92:0,33,313	0/0:6,0:13:30.36:0,30,266	0/0:3,0:8:18.50:0,18,195	0/0:18,0:21:44.47:0,44,512	0/0:13,0:14:38.54:0,39,459	0/1:5,14:19:2.13:229,0,2	0/0:16,0:16:38.55:0,39,471
chr10	50938314	.	TA	T	4942.70	PASS	AB=0.900;AC=25;AF=0.446;AN=56;BaseQRankSum=12.277;DP=544;FS=5.980;HRun=9;HaplotypeScore=52.5619;InbreedingCoeff=0.9423;MQ=68.59;MQ0=0;MQRankSum=-0.190;QD=21.58;ReadPosRankSum=5.014;VQSLOD=5.3073;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,14:14:30.02:275,30,0	1/1:0,11:11:33.02:300,33,0	0/0:9,0:8:18.51:0,19,198	0/0:12,0:11:15.03:0,15,161	0/0:37,0:37:99:0,102,1176	1/1:2,25:27:63.03:577,63,0	1/1:2,11:13:30.01:275,30,0	0/0:30,0:30:75.22:0,75,866	1/1:2,18:20:48.02:439,48,0	0/0:23,0:23:63.18:0,63,718	0/0:25,0:25:69.20:0,69,788	1/1:5,24:29:69.03:632,69,0	1/1:1,12:13:33.02:302,33,0	0/0:15,0:15:36.11:0,36,415	1/1:0,22:22:54.03:494,54,0	1/1:2,23:25:63.03:577,63,0	0/0:17,0:18:47.97:0,48,534	0/1:8,1:9:3.43:3,0,203	0/0:26,0:26:72.17:0,72,809	0/0:30,0:30:78.23:0,78,900	0/0:11,0:11:33.10:0,33,381	1/1:2,21:23:57.02:520,57,0	1/1:1,17:18:48.03:439,48,0	1/1:1,4:5:12.01:110,12,0	0/0:17,0:17:42.12:0,42,485	0/0:18,0:18:54.15:0,54,614	0/0:33,0:32:99:0,99,1130	0/0:11,0:11:30.09:0,30,346
chr10	50940153	.	GA	G	2841.65	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=2.505;DP=640;FS=7.847;HRun=8;HaplotypeScore=74.7782;InbreedingCoeff=0.9055;MQ=69.07;MQ0=0;MQRankSum=-0.161;QD=20.15;ReadPosRankSum=-1.580;VQSLOD=2.8431;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:44:99:0,123,1464	0/0:11,0:11:21.05:0,21,244	0/1:14,0:13:4.25:4,0,230	0/0:9,0:8:12:0,12,126	0/0:25,0:25:57.17:0,57,688	0/0:31,0:31:84.24:0,84,993	0/0:21,0:21:57.16:0,57,667	1/1:5,32:37:90.07:858,90,0	0/0:20,0:20:54.17:0,54,652	0/0:28,0:28:72.22:0,72,870	0/0:18,0:18:42.13:0,42,507	0/0:19,0:19:54.15:0,54,640	0/0:30,0:30:78.24:0,78,942	0/0:21,0:21:57.13:0,57,672	0/0:31,0:31:93.24:0,93,1106	0/0:21,0:21:57.13:0,57,672	0/0:23,1:24:37.19:0,37,706	0/0:6,0:6:15.05:0,15,181	1/1:3,11:14:33.05:319,33,0	1/1:4,26:30:41.88:687,42,0	1/1:0,20:20:57.09:550,57,0	0/0:19,0:19:54.15:0,54,641	0/0:22,0:22:60.18:0,60,725	0/0:31,0:31:93.26:0,93,1100	0/0:23,0:23:66.19:0,66,779	0/0:22,0:22:63.19:0,63,752	1/1:5,21:26:63.06:600,63,0	0/0:23,0:23:63.19:0,63,761
chr10	50940331	.	GAC	G	3500.39	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=12.486;DP=625;FS=0.000;HRun=0;HaplotypeScore=132.4661;InbreedingCoeff=0.6032;MQ=56.74;MQ0=20;MQRankSum=4.408;QD=16.21;ReadPosRankSum=4.554;VQSLOD=3.6597;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:32,0:25:19.14:155,19,0	1/1:2,10:12:24.08:367,24,0	0/0:28,0:22:46.49:0,46,825	0/0:21,1:9:8.10:0,8,245	0/0:30,0:30:81.26:0,81,1508	1/1:4,17:20:23.92:536,24,0	1/1:2,13:15:27.02:413,27,0	0/0:39,0:38:99:0,108,1997	1/1:1,14:15:30.10:459,30,0	0/0:25,0:24:69.24:0,69,1333	0/0:27,0:27:72.13:0,72,1389	0/1:14,0:9:8.52:43,0,9	0/1:19,0:12:23.33:63,0,23	0/0:19,0:19:45.12:0,45,755	1/1:8,15:21:38.87:563,39,0	1/1:2,18:20:48.16:735,48,0	0/0:19,0:19:45.13:0,45,821	0/0:28,0:28:69.71:0,70,1313	0/0:22,0:21:57.63:0,58,1019	0/0:26,0:26:75.24:0,75,1386	0/0:29,0:28:72.25:0,72,1361	0/1:15,0:11:57.79:58,0,75	0/1:16,0:11:40.49:40,0,41	0/1:14,0:10:17.58:66,0,18	0/0:28,0:28:78.23:0,78,1415	0/0:31,0:30:87.28:0,87,1559	0/0:24,0:24:68.72:0,69,1243	0/0:10,0:10:30.10:0,30,568
chr10	50940335	.	TAG	T	495.57	PASS	AB=0.750;AC=9;AF=0.161;AN=56;BaseQRankSum=6.090;DP=631;FS=42.324;HRun=0;HaplotypeScore=148.2784;InbreedingCoeff=0.2367;MQ=55.60;MQ0=20;MQRankSum=2.977;QD=3.87;ReadPosRankSum=-0.462;VQSLOD=1.4238;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:16,14:23:20.56:236,21,0	0/0:12,0:12:13.62:0,14,43	0/0:27,0:20:35.20:0,35,592	0/0:22,0:8:12.73:0,13,180	0/0:30,0:30:72.23:0,72,1068	0/0:22,0:21:13.21:0,13,38	0/1:18,0:18:3.25:3,0,14	0/0:39,0:38:93.27:0,93,1302	0/0:16,0:16:18.22:0,18,61	0/0:27,0:25:75.23:0,75,1105	0/0:26,0:26:72.12:0,72,1063	1/1:7,8:10:0.31:64,0,0	0/1:9,9:11:47.44:94,0,47	0/0:17,0:17:24.91:0,25,446	0/0:23,0:21:16.01:0,16,43	0/0:23,0:23:4.57:0,5,36	0/0:19,0:19:42.14:0,42,615	0/0:27,0:27:69.54:0,70,1009	0/0:21,0:20:47.14:0,47,699	0/0:26,0:26:64.99:0,65,955	0/0:32,0:31:65.81:0,66,970	0/1:10,5:11:74.22:85,0,74	0/1:8,9:12:56.94:57,0,83	0/1:8,7:11:59.18:93,0,59	0/0:27,0:27:65.87:0,66,955	0/0:32,0:31:71.35:0,71,951	0/0:24,0:24:58.58:0,59,830	0/0:11,0:11:33.11:0,33,532
chr10	50940337	.	GAGAT	G	778.26	PASS	AB=0.929;AC=29;AF=0.630;AN=46;BaseQRankSum=1.677;DP=630;FS=1.286;HRun=0;HaplotypeScore=164.2717;InbreedingCoeff=0.5024;MQ=53.62;MQ0=23;MQRankSum=1.058;QD=2.26;ReadPosRankSum=-1.082;VQSLOD=1.9296;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:22:0:0,0,0	1/1:12,0:12:3:26,3,0	./.	./.	./.	1/1:23,0:22:1.69:5,2,0	0/0:18,0:18:0:0,0,1	./.	0/0:15,0:15:2.68:0,3,11	0/0:27,0:25:9.03:0,9,199	0/1:24,2:26:0.26:0,0,0	1/1:15,0:11:2.76:17,3,0	0/0:15,0:10:5.24:0,5,21	1/1:11,6:17:12.04:166,12,0	./.	1/1:24,0:24:3:27,3,0	0/0:17,0:18:3.48:0,3,42	1/1:27,0:27:2.66:19,3,0	1/1:23,0:23:5.93:40,6,0	1/1:25,0:25:6.01:56,6,0	1/1:31,0:30:10.76:84,11,0	0/0:13,0:11:2.50:0,2,9	1/1:17,0:12:5.37:31,5,0	1/1:12,0:10:1.36:3,1,0	1/1:22,5:27:9.03:132,9,0	1/1:26,7:32:18.03:221,18,0	1/1:26,0:26:11.71:83,12,0	0/0:11,0:11:15.01:0,15,242
chr10	50940731	.	A	ATC	14452.73	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-4.655;DP=696;FS=9.684;HRun=0;HaplotypeScore=83.0867;InbreedingCoeff=0.9998;MQ=80.79;MQ0=0;MQRankSum=-2.299;QD=47.39;ReadPosRankSum=4.077;VQSLOD=5.7940;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,27:28:81.28:1458,81,0	1/1:0,13:14:36.12:647,36,0	0/0:23,0:23:60.20:0,60,834	0/0:21,0:21:54.14:0,54,723	0/0:31,0:31:78.25:0,78,1074	1/1:0,42:43:99:2213,123,0	1/1:1,22:23:54.19:972,54,0	0/0:30,0:30:84.27:0,84,1160	1/1:1,14:15:33.11:594,33,0	0/0:38,0:38:99:0,102,1414	0/0:26,0:26:75.22:0,75,1014	1/1:0,17:17:51.17:917,51,0	1/1:2,24:26:54.19:971,54,0	0/0:28,0:28:81.27:0,81,1134	1/1:1,31:32:84.29:1510,84,0	1/1:0,32:33:84.29:1512,84,0	0/0:22,0:22:63.21:0,63,882	0/0:11,0:11:33.11:0,33,462	0/0:17,0:17:48.16:0,48,672	0/0:24,0:24:63.21:0,63,881	0/0:11,0:11:30.10:0,30,420	1/1:2,24:26:72.25:1284,72,0	1/1:1,29:30:78.27:1401,78,0	1/1:0,18:18:54.19:973,54,0	0/0:28,0:28:75.25:0,75,1049	0/0:28,0:28:81.27:0,81,1133	0/0:34,0:34:99:0,102,1428	0/0:19,0:19:57.19:0,57,796
chr10	50943110	.	ACTT	A	6293.59	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-15.312;DP=716;FS=3.665;HRun=0;HaplotypeScore=202.4569;InbreedingCoeff=0.9918;MQ=78.50;MQ0=0;MQRankSum=-7.428;QD=45.94;ReadPosRankSum=-3.615;VQSLOD=4.8752;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:32.35:0,32,322	0/0:8,0:8:23.59:0,24,148	0/0:26,0:26:64.22:0,64,490	0/0:27,0:27:41.09:0,41,390	0/0:26,0:26:73.67:0,74,462	0/0:20,0:20:49.80:0,50,305	0/0:32,0:32:66.04:0,66,470	1/1:0,32:32:96.29:1610,96,0	0/0:25,0:25:73.75:0,74,462	0/0:17,0:17:44.27:0,44,287	0/0:17,0:17:41.30:0,41,263	0/0:26,0:26:70.27:0,70,435	0/0:25,0:25:70.77:0,71,443	0/0:34,0:34:78.43:0,78,540	0/0:39,0:39:99:0,106,652	0/0:36,0:36:91.44:0,91,574	0/0:44,0:44:99:0,99,695	0/0:21,0:21:53.08:0,53,333	1/1:0,13:13:36.12:631,36,0	1/1:0,25:25:69.24:1214,69,0	1/1:1,40:41:93.32:1624,93,0	0/0:23,0:23:55.84:0,56,351	0/0:14,0:14:35.11:0,35,214	0/0:36,0:36:99:0,99,618	0/0:22,0:22:56:0,56,354	0/0:22,0:22:64.95:0,65,407	1/1:0,26:26:69.24:1214,69,0	0/0:5,0:5:11.78:0,12,74
chr10	50943784	.	C	CA	11726.51	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-12.524;DP=717;FS=3.266;HRun=4;HaplotypeScore=70.4797;InbreedingCoeff=0.9964;MQ=78.96;MQ0=0;MQRankSum=-7.541;QD=35.32;ReadPosRankSum=3.623;VQSLOD=5.3672;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,50:51:99:1928,141,0	1/1:0,7:7:18.06:246,18,0	0/0:19,0:19:45.58:0,46,492	0/0:13,0:13:15.76:0,16,255	0/0:23,0:23:66.19:0,66,748	1/1:2,28:30:78.26:1067,78,0	1/1:0,21:21:63.21:862,63,0	0/0:31,0:31:90.25:0,90,1012	1/1:3,12:15:36.12:493,36,0	0/0:31,0:31:90.24:0,90,1007	0/0:18,0:18:51.14:0,51,578	1/1:0,29:29:78.26:1066,78,0	1/1:4,35:39:90.24:1231,90,0	0/0:33,0:33:93.26:0,93,1055	1/1:1,39:40:99:1519,111,0	1/1:6,20:26:54.18:739,54,0	0/0:21,0:21:63.18:0,63,714	0/0:29,0:29:84.24:0,84,953	0/0:22,0:22:63.16:0,63,705	0/0:39,0:39:99:0,108,1216	0/0:22,0:21:66.17:0,66,739	1/1:4,22:26:63.21:852,63,0	1/1:2,21:23:57.19:780,57,0	1/1:1,24:25:69.23:944,69,0	0/0:17,0:17:51.15:0,51,579	0/0:30,0:30:75.19:0,75,835	0/0:30,0:30:84.22:0,84,943	0/0:7,0:7:21.06:0,21,238
chr10	50945054	.	G	GATT	2643.05	PASS	AC=24;AF=0.545;AN=44;BaseQRankSum=-6.889;DP=275;FS=19.722;HRun=0;HaplotypeScore=46.2662;InbreedingCoeff=0.6258;MQ=66.80;MQ0=3;MQRankSum=4.788;QD=17.05;ReadPosRankSum=-0.676;VQSLOD=1.4334;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,1:18:6.02:78,6,0	0/0:1,0:3:5.93:0,6,40	./.	./.	1/1:6,3:8:9.03:173,9,0	0/0:4,0:14:26.78:0,27,188	0/0:4,0:6:5.95:0,6,41	0/0:18,0:26:2.68:0,3,11	0/0:3,0:6:5.95:0,6,42	./.	1/1:4,2:5:6.49:110,6,0	1/1:9,0:9:3.01:39,3,0	1/1:8,0:8:3:25,3,0	1/1:7,0:7:5.97:76,6,0	0/0:4,0:6:2.98:0,3,21	0/0:6,0:9:8.93:0,9,63	1/1:5,17:24:45.15:865,45,0	1/1:9,9:21:27.09:512,27,0	0/0:9,0:10:2.98:0,3,21	0/0:2,0:3:2.97:0,3,20	./.	./.	1/1:8,0:8:6.02:89,6,0	1/1:6,0:6:6.02:83,6,0	1/1:5,5:11:15.05:288,15,0	./.	0/0:8,0:10:5.94:0,6,41	1/1:18,9:27:24.08:461,24,0
chr10	50948722	.	ATTACAAGCTTCCTTTCTTTTTTTTTTTTTTTTTT	A	20497.44	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=11.483;DP=489;FS=13.436;HRun=0;HaplotypeScore=358.7696;InbreedingCoeff=0.9244;MQ=72.37;MQ0=2;MQRankSum=-11.638;QD=74.00;ReadPosRankSum=5.870;VQSLOD=2.1305;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,12:14:9.03:776,9,0	1/1:9,0:9:26.74:655,27,0	0/0:20,0:15:23.39:0,23,317	0/0:19,0:12:25.08:0,25,713	0/0:25,0:25:72.21:0,72,4902	1/1:19,0:19:47.70:2007,48,0	1/1:6,0:6:11.94:94,12,0	1/1:26,0:26:50.68:406,51,0	1/1:8,0:8:23.94:827,24,0	0/0:25,0:25:57.18:0,57,3835	0/0:24,0:24:63.22:0,63,4405	1/1:1,16:17:15.05:1307,15,0	1/1:2,18:20:18.06:1568,18,0	0/0:11,0:11:24.07:0,24,1720	1/1:22,0:22:59.76:3050,60,0	1/1:14,0:14:38.80:1709,39,0	0/0:28,0:28:75.14:0,75,5222	0/0:16,0:16:30.08:0,30,2504	1/1:12,9:21:26.89:441,27,0	1/1:4,13:17:27.04:1895,27,0	1/1:1,13:14:3.01:253,3,0	1/1:4,11:15:18.06:1329,18,0	1/1:3,8:11:6.02:522,6,0	1/1:1,15:16:6.02:523,6,0	0/0:12,0:12:24.07:0,24,1646	0/0:25,0:25:60.19:0,60,2843	1/1:4,23:27:36.12:3136,36,0	0/0:6,0:6:15.03:0,15,536
chr10	50948728	.	AGCTTCCTTTCTTTTTTTTTTTTTTTTTTTT	A	14969.52	PASS	AB=0.859;AC=20;AF=0.357;AN=56;BaseQRankSum=12.993;DP=467;FS=1.574;HRun=0;HaplotypeScore=320.7255;InbreedingCoeff=0.1466;MQ=69.40;MQ0=4;MQRankSum=-10.733;QD=67.43;ReadPosRankSum=11.817;VQSLOD=1.3707;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,0:12:9.03:608,9,0	0/1:7,2:9:82.92:412,0,83	0/0:20,0:12:36.12:0,36,852	0/0:19,0:12:28.25:0,28,939	0/0:26,0:26:75.26:0,75,5582	0/1:11,7:18:99:1517,0,123	0/0:4,0:4:10.21:0,10,45	0/0:24,0:24:67.42:0,67,825	0/1:5,3:8:33.79:562,0,34	0/0:23,0:22:63.21:0,63,4473	0/0:22,0:22:66.23:0,66,4988	1/1:16,0:16:15.05:1027,15,0	0/1:20,0:20:48.91:1209,0,49	0/0:12,0:12:30.10:0,30,1949	0/1:9,11:20:98.88:2370,0,99	0/1:7,6:13:76.84:1285,0,77	0/0:28,0:27:81.26:0,81,5735	0/0:17,0:17:45.10:0,45,3446	0/1:16,0:16:99:160,0,536	0/1:15,0:15:99:1399,0,104	1/1:13,0:13:3.01:197,3,0	0/1:14,0:14:99:971,0,106	0/1:9,0:9:44.32:401,0,44	1/1:15,0:15:6.02:411,6,0	0/0:15,0:15:39.12:0,39,2392	0/0:27,0:27:78.27:0,78,4233	1/1:24,0:23:15.14:2440,15,0	0/0:5,0:5:15.05:0,15,728
chr10	50949772	.	CT	C	7035.32	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=15.115;DP=917;FS=5.141;HRun=1;HaplotypeScore=110.9677;InbreedingCoeff=0.9349;MQ=83.68;MQ0=0;MQRankSum=-5.402;QD=37.42;ReadPosRankSum=2.780;VQSLOD=4.8047;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:60,0:60:99:0,180,2816	1/1:1,17:18:0.21:580,0,0	0/0:33,0:33:99:0,99,1520	0/0:22,0:21:60.20:0,60,932	0/0:32,0:32:96.33:0,96,1517	1/1:0,35:35:99:1425,102,0	1/1:0,31:31:87.29:1216,87,0	0/0:39,0:39:99:0,114,1799	1/1:0,31:31:84.28:1173,84,0	0/0:40,0:40:99:0,120,1918	0/0:16,0:16:48.15:0,48,744	0/0:34,0:34:99:0,102,1604	0/0:39,0:39:99:0,117,1843	0/0:31,0:31:90.31:0,90,1434	1/1:0,37:37:99:1383,99,0	1/1:0,36:36:90.30:1257,90,0	0/0:36,0:36:99:0,108,1694	0/0:32,0:33:99:0,99,1521	0/0:21,0:21:63.19:0,63,949	0/0:26,0:26:78.25:0,78,1224	0/0:43,0:43:99:0,129,2036	0/0:40,0:40:99:0,120,1886	0/0:32,0:32:96.33:0,96,1533	0/0:47,0:47:99:0,138,2139	0/0:38,0:38:99:0,114,1750	0/0:30,0:30:90.30:0,90,1417	0/0:34,0:34:99:0,102,1630	0/0:3,0:3:9.03:0,9,144
chr10	50951530	.	CTCTTTCTTTCTT	C	2890.24	PASS	AB=0.780;AC=18;AF=0.346;AN=52;BaseQRankSum=4.872;DP=525;FS=1.805;HRun=0;HaplotypeScore=214.2364;InbreedingCoeff=0.3172;MQ=55.48;MQ0=13;MQRankSum=-6.193;QD=11.80;ReadPosRankSum=-2.438;VQSLOD=2.3626;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:26:46.92:89,0,47	0/0:10,0:10:12.04:0,12,514	./.	./.	0/0:16,0:29:45.11:0,45,752	0/1:15,0:15:18.47:18,0,146	0/1:23,0:23:20.29:20,0,25	1/1:29,10:38:26.56:321,27,0	0/0:8,0:9:17.89:0,18,437	0/0:19,0:17:39.12:0,39,1372	0/0:14,0:14:27.08:0,27,1243	0/1:9,0:15:26.10:305,0,26	0/1:9,0:15:82.30:82,0,214	0/0:13,0:13:21.07:0,21,717	0/0:20,0:24:36.10:0,36,732	0/0:12,0:11:18.06:0,18,621	0/0:23,0:24:41.30:0,41,1087	0/0:19,0:18:30.09:0,30,1101	1/1:15,7:22:20.87:480,21,0	1/1:3,13:16:30.10:904,30,0	1/1:13,0:13:2.94:77,3,0	0/1:5,0:9:5.34:101,0,5	0/1:2,0:8:7.30:108,0,7	0/1:10,0:16:15.04:55,0,15	0/0:13,0:24:15.04:0,15,244	0/0:19,0:19:45.15:0,45,1586	1/1:10,15:25:15.05:507,15,0	0/0:15,0:15:36.12:0,36,1579
chr10	50951584	.	TTTCCTTCCTTCC	T	2632.35	PASS	AB=0.890;AC=14;AF=0.250;AN=56;BaseQRankSum=7.539;DP=476;FS=2.766;HRun=0;HaplotypeScore=198.9776;InbreedingCoeff=0.6279;MQ=55.77;MQ0=10;MQRankSum=-9.005;QD=16.56;ReadPosRankSum=1.329;VQSLOD=2.9103;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:6,22:27:41.22:171,0,41	0/0:9,0:9:21.07:0,21,631	0/0:8,0:6:15.48:0,15,489	0/0:7,0:6:12.27:0,12,575	0/0:24,0:24:63.19:0,63,2249	0/0:27,0:27:78.20:0,78,1824	0/0:15,0:14:32.93:0,33,612	0/0:31,0:29:69.18:0,69,1929	0/0:16,0:16:48.04:0,48,1458	0/0:17,0:14:39.13:0,39,1845	0/0:17,0:17:48.16:0,48,1964	1/1:3,8:11:20.67:536,21,0	1/1:3,12:15:26.90:653,27,0	0/0:12,0:12:30.57:0,31,1560	0/0:17,0:17:44.99:0,45,1213	0/0:14,0:14:42.14:0,42,1456	0/1:25,0:25:6:6,0,1791	0/0:22,0:22:51.15:0,51,1941	0/0:15,0:14:36.88:0,37,806	0/1:21,0:21:10.02:10,0,1067	0/0:9,0:9:12.04:0,12,402	1/1:2,6:8:15.01:384,15,0	1/1:4,13:16:21.05:413,21,0	1/1:11,1:12:23.91:632,24,0	0/0:12,0:11:12.04:0,12,473	0/0:29,0:29:78.27:0,78,3324	0/1:21,0:21:9.03:9,0,887	0/0:15,0:15:44.97:0,45,1601
chr10	50952061	.	CT	C	7912.77	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=8.058;DP=621;FS=1.014;HRun=2;HaplotypeScore=70.1766;InbreedingCoeff=0.9998;MQ=90.31;MQ0=0;MQRankSum=-7.328;QD=32.17;ReadPosRankSum=8.003;VQSLOD=3.8050;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,23:34:90.58:1018,91,0	1/1:1,14:15:30.10:390,30,0	0/0:20,0:20:60.20:0,60,888	0/0:30,0:30:78.38:0,78,1103	0/0:26,0:26:66.15:0,66,860	1/1:0,20:20:48.16:623,48,0	1/1:1,23:24:60.19:779,60,0	0/0:29,0:29:78.16:0,78,1028	1/1:0,19:19:51.17:662,51,0	0/0:28,0:28:72.04:0,72,756	0/0:25,0:25:72.01:0,72,838	1/1:0,23:23:63.20:815,63,0	1/1:0,17:17:48.16:623,48,0	0/0:27,0:27:72.11:0,72,791	1/1:0,17:17:48.16:623,48,0	1/1:0,16:16:45.15:584,45,0	0/0:35,0:35:99:0,105,1404	0/0:18,0:18:51.12:0,51,653	0/0:19,0:18:48.11:0,48,609	0/0:19,0:19:54.12:0,54,682	0/0:24,0:24:72.15:0,72,890	1/1:13,9:22:59.55:603,60,0	1/1:11,5:16:42.01:413,42,0	1/1:1,22:23:60.19:779,60,0	0/0:27,0:27:75.04:0,75,804	0/0:21,0:21:54.08:0,54,627	0/0:18,0:18:51.11:0,51,636	0/0:9,0:9:27.09:0,27,405
chr10	50954089	.	C	CT	3659.14	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-0.298;DP=486;FS=0.381;HRun=7;HaplotypeScore=52.0649;InbreedingCoeff=0.9689;MQ=86.41;MQ0=0;MQRankSum=-2.461;QD=23.46;ReadPosRankSum=-0.067;VQSLOD=3.5239;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,0:8:20.43:120,20,0	1/1:1,1:2:3.01:36,3,0	0/0:19,0:19:36.02:0,36,332	0/0:19,0:19:33.94:0,34,362	0/0:17,0:17:42.05:0,42,399	1/1:4,11:15:33.10:399,33,0	1/1:5,15:20:39.12:471,39,0	0/0:29,0:29:66.05:0,66,621	1/1:0,17:17:51.16:616,51,0	0/0:20,0:20:48.04:0,48,450	0/0:12,0:12:30.04:0,30,290	1/1:14,0:14:40.33:224,40,0	1/1:19,0:19:46.39:257,46,0	0/0:17,0:17:48.05:0,48,453	1/1:0,23:23:63.19:761,63,0	1/1:4,13:17:39.12:471,39,0	0/0:21,0:21:51.07:0,51,492	0/0:11,0:11:27.04:0,27,261	0/0:25,0:26:62.11:0,62,581	0/0:20,0:20:57.08:0,57,546	0/0:24,0:24:60.09:0,60,579	1/1:8,0:8:19.97:101,20,0	1/1:8,0:8:23.27:136,23,0	1/1:5,0:5:11.68:68,12,0	0/0:19,0:19:48.07:0,48,464	0/0:22,0:22:60.09:0,60,579	0/0:36,0:36:96.15:0,96,927	0/0:18,0:18:51.08:0,51,492
chr10	50954096	.	T	TA	2885.58	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=3.222;DP=466;FS=0.379;HRun=2;HaplotypeScore=50.9636;InbreedingCoeff=0.8830;MQ=85.86;MQ0=0;MQRankSum=-1.528;QD=18.38;ReadPosRankSum=1.999;VQSLOD=3.7618;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,7:7:21.07:294,21,0	1/1:1,0:1:2.68:11,3,0	0/0:16,0:16:38.40:0,38,405	0/0:18,0:18:44.83:0,45,461	0/0:16,0:16:48.11:0,48,565	1/1:13,0:13:9.16:114,9,0	1/1:16,0:16:12.60:108,13,0	0/0:24,0:24:63.18:0,63,756	0/1:21,0:21:36.24:143,0,36	0/0:18,0:18:45.13:0,45,537	0/0:11,0:11:30.08:0,30,358	1/1:1,14:15:42.14:587,42,0	1/1:2,20:22:48.16:671,48,0	0/0:16,0:16:42.13:0,42,519	1/1:25,0:25:37.52:205,38,0	1/1:15,0:15:35.10:157,35,0	0/0:20,0:20:60.14:0,60,702	0/0:12,0:12:33.07:0,33,381	0/0:24,0:24:69.05:0,69,798	0/0:21,0:21:57.16:0,57,681	0/0:23,0:23:66.17:0,66,789	1/1:0,9:9:24.04:314,24,0	1/1:0,8:8:24.08:331,24,0	1/1:0,5:5:12.04:168,12,0	0/0:16,0:16:48.15:0,48,593	0/0:22,0:22:66.19:0,66,796	0/0:33,0:33:99:0,99,1199	0/0:19,0:19:57.07:0,57,669
chr10	50954277	.	ATC	A	1895.26	PASS	AC=12;AF=0.231;AN=52;BaseQRankSum=3.212;DP=350;FS=1.750;HRun=0;HaplotypeScore=90.8368;InbreedingCoeff=0.8437;MQ=56.70;MQ0=1;MQRankSum=4.463;QD=17.55;ReadPosRankSum=-1.351;VQSLOD=3.5850;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:7:8.95:0,9,69	./.	0/0:2,0:2:5.98:0,6,46	0/0:9,0:8:15.03:0,15,205	0/0:18,1:19:12.17:0,12,691	0/0:16,0:16:32.91:0,33,278	0/0:5,0:5:2.99:0,3,23	1/1:21,21:42:99:1072,103,0	0/0:8,0:8:8.97:0,9,70	0/0:14,0:14:39.11:0,39,611	0/0:24,0:24:66.06:0,66,1049	0/0:7,0:7:6:0,6,57	0/0:6,0:6:11.99:0,12,120	0/0:10,0:10:26.89:0,27,362	0/0:16,0:16:14.95:0,15,117	0/0:7,0:7:8.99:0,9,93	0/0:14,0:14:32.88:0,33,484	0/0:17,0:17:47.93:0,48,648	1/1:14,0:13:29.63:309,30,0	1/1:14,0:14:26.63:206,27,0	1/1:17,0:17:31.48:225,31,0	1/1:4,0:4:5.74:37,6,0	0/0:10,0:10:11.94:0,12,89	./.	0/0:18,0:17:51.17:0,51,844	0/0:12,0:12:25.84:0,26,355	1/1:17,0:17:34.53:221,35,0	0/0:14,0:14:42.14:0,42,697
chr10	50954295	.	A	ATG	1484.02	PASS	AB=0.800;AC=8;AF=0.160;AN=50;BaseQRankSum=5.767;DP=374;FS=10.977;HRun=0;HaplotypeScore=97.3744;InbreedingCoeff=0.3155;MQ=55.35;MQ0=2;MQRankSum=1.156;QD=14.00;ReadPosRankSum=2.405;VQSLOD=3.0981;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:11,0:6:11.35:0,11,80	0/0:21,0:9:23.10:0,23,248	0/0:21,0:21:63.03:0,63,878	0/0:12,0:12:19.59:0,20,93	0/0:4,0:4:2.62:0,3,13	0/1:31,3:34:99:193,0,191	0/0:7,0:7:7.80:0,8,39	0/0:21,0:21:60.19:0,60,882	0/0:28,0:28:81.21:0,81,1130	0/1:7,0:7:5.31:5,0,8	0/0:4,0:4:5.74:0,6,36	0/0:8,0:8:21.07:0,21,314	0/0:11,0:11:8.48:0,8,42	0/0:7,0:7:5.60:0,6,26	0/0:17,0:17:42.13:0,42,606	0/0:21,0:21:54.12:0,54,725	0/1:9,5:13:26.81:260,0,27	1/1:2,14:16:18.43:386,18,0	0/1:3,15:18:24.87:412,0,25	0/0:2,0:2:2.80:0,3,13	0/0:8,0:8:11.19:0,11,51	./.	0/0:22,0:21:63.17:0,63,903	0/0:15,0:15:45.11:0,45,597	1/1:2,15:17:13.75:364,14,0	0/0:15,0:15:45.14:0,45,663
chr10	50954297	.	ATG	A	173.45	PASS	AB=0.894;AC=19;AF=0.380;AN=50;BaseQRankSum=7.398;DP=377;FS=0.000;HRun=0;HaplotypeScore=100.9564;InbreedingCoeff=0.5349;MQ=54.69;MQ0=3;MQRankSum=-5.433;QD=2.09;ReadPosRankSum=2.286;VQSLOD=1.8550;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:13,0:6:8.97:0,9,93	0/0:24,0:9:1.08:0,1,157	0/0:21,0:21:53.60:0,54,739	1/1:12,0:12:19.59:91,20,0	1/1:4,0:4:2.78:13,3,0	0/0:32,0:36:41.61:0,42,401	1/1:7,0:7:7.90:39,8,0	0/0:19,1:20:18.43:0,18,731	0/0:27,1:28:26.92:0,27,819	0/1:7,0:7:12.87:13,0,15	1/1:3,0:3:2.74:12,3,0	0/1:6,2:8:21.15:21,0,178	1/1:11,0:11:8.39:39,8,0	1/1:7,0:7:5.60:26,6,0	0/0:17,2:19:8.91:0,9,553	0/0:18,1:19:5.89:0,6,525	0/0:13,0:12:26.91:0,27,248	0/0:15,0:15:26.99:0,27,238	0/0:18,0:18:39.02:0,39,407	1/1:1,0:1:2.74:12,3,0	1/1:8,0:8:11.03:48,11,0	./.	0/0:22,0:21:54.17:0,54,823	0/1:13,2:15:28.42:28,0,443	0/0:18,0:18:36.01:0,36,336	0/0:15,0:15:45.09:0,45,670
chr10	50954307	.	GTGTGTGTGTGCATGCGCGTGCA	G	3683.23	PASS	AC=18;AF=0.360;AN=50;BaseQRankSum=8.043;DP=369;FS=0.000;HRun=0;HaplotypeScore=206.1169;InbreedingCoeff=0.8438;MQ=55.78;MQ0=5;MQRankSum=-6.856;QD=61.39;ReadPosRankSum=2.263;VQSLOD=2.6002;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:15,0:8:15.52:0,16,995	0/0:27,0:10:14.97:0,15,1174	0/0:20,0:20:57.20:0,57,4918	1/1:3,10:13:21.07:1248,21,0	1/1:3,1:4:3.01:178,3,0	0/0:31,0:31:46.54:0,47,3546	1/1:4,3:7:7.61:532,8,0	0/0:19,0:19:54.19:0,54,5292	0/0:23,0:23:60.20:0,60,5340	1/1:7,0:7:8.62:260,9,0	1/1:3,0:3:3.01:92,3,0	0/0:8,0:8:18.06:0,18,1311	1/1:7,5:12:9.03:535,9,0	1/1:1,4:5:6.02:356,6,0	0/0:22,0:22:57.20:0,57,4798	0/0:17,0:17:48.12:0,48,3383	0/0:12,0:11:27.09:0,27,2139	0/0:15,0:15:30.10:0,30,2831	0/0:18,0:18:39.13:0,39,3193	1/1:1,0:1:3.01:90,3,0	1/1:8,0:8:12.04:391,12,0	./.	0/0:20,0:19:48.16:0,48,4614	0/0:15,0:15:45.15:0,45,4316	0/0:18,0:18:42.13:0,42,3501	0/0:16,0:16:45.15:0,45,4086
chr10	50954313	.	GTGTGCATGCGCGTGCA	G	2795.84	PASS	AC=18;AF=0.360;AN=50;BaseQRankSum=7.929;DP=369;FS=0.874;HRun=0;HaplotypeScore=176.2392;InbreedingCoeff=0.8500;MQ=55.83;MQ0=6;MQRankSum=-6.794;QD=49.93;ReadPosRankSum=1.817;VQSLOD=3.4843;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:19,0:10:20.45:0,20,976	0/0:29,0:12:19.97:0,20,1162	0/0:19,0:19:57.20:0,57,3732	1/1:13,0:13:21.07:805,21,0	1/1:4,0:4:2.79:115,3,0	0/0:32,0:32:56.61:0,57,3467	1/1:5,0:5:9.03:345,9,0	0/0:19,0:19:57.20:0,57,4180	0/0:22,0:22:60.20:0,60,4072	1/1:3,4:7:9.03:319,9,0	1/1:2,1:3:3.01:140,3,0	0/0:8,0:8:18.06:0,18,1010	1/1:10,0:10:9.03:345,9,0	1/1:5,0:5:6.02:230,6,0	0/0:23,0:23:21.31:0,21,3642	0/0:16,0:16:48.05:0,48,2490	0/0:11,0:11:30.10:0,30,1752	0/0:15,0:15:30.10:0,30,2097	0/0:17,0:17:39.13:0,39,2385	1/1:0,1:1:3.01:140,3,0	1/1:4,4:8:12.04:537,12,0	./.	0/0:20,0:19:51.17:0,51,3694	0/0:17,0:17:51.18:0,51,3545	0/0:18,0:18:42.06:0,42,2635	0/0:16,0:16:45.15:0,45,3103
chr10	50955440	.	AG	A	3845.88	PASS	AB=1.000;AC=49;AF=0.942;AN=52;BaseQRankSum=-0.389;DP=198;FS=38.316;HRun=5;HaplotypeScore=44.5441;InbreedingCoeff=0.2061;MQ=37.69;MQ0=5;MQRankSum=-2.429;QD=20.79;ReadPosRankSum=1.230;VQSLOD=1.2712;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,8:12:9.02:101,9,0	1/1:0,2:2:6.02:68,6,0	0/0:11,0:2:2.90:0,3,16	0/1:4,0:2:17.89:18,0,18	1/1:1,6:7:9.03:101,9,0	1/1:0,9:9:27.08:303,27,0	1/1:3,3:5:3.01:34,3,0	1/1:1,1:2:3.01:34,3,0	1/1:2,7:9:18.05:202,18,0	1/1:3,10:13:33.09:369,33,0	1/1:0,7:7:21.06:237,21,0	1/1:1,12:12:27.08:304,27,0	1/1:2,8:9:18.05:201,18,0	1/1:1,6:6:15.04:168,15,0	1/1:4,7:10:9.02:101,9,0	1/1:0,9:7:21.06:236,21,0	1/1:2,5:6:12.03:135,12,0	./.	1/1:0,6:4:12.03:136,12,0	1/1:3,7:10:12.03:134,12,0	./.	1/1:0,6:6:15:155,15,0	1/1:0,6:6:9.03:101,9,0	1/1:1,2:3:6.02:67,6,0	1/1:0,3:3:9.03:101,9,0	1/1:2,9:10:24.07:271,24,0	1/1:1,6:7:18.05:201,18,0	1/1:0,2:2:6.02:68,6,0
chr10	50955451	.	GA	G	3668.13	PASS	AB=1.000;AC=47;AF=0.940;AN=50;BaseQRankSum=-2.237;DP=166;FS=17.160;HRun=3;HaplotypeScore=40.9137;InbreedingCoeff=0.2526;MQ=43.03;MQ0=1;MQRankSum=-2.426;QD=23.22;ReadPosRankSum=2.237;VQSLOD=1.9530;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,10:8:12.04:145,12,0	./.	0/0:4,0:2:3.01:0,3,34	0/1:5,0:2:7.53:8,0,19	1/1:2,5:7:6.02:73,6,0	1/1:1,8:9:24.08:293,24,0	1/1:0,3:3:3.01:37,3,0	1/1:0,1:1:3.01:37,3,0	1/1:1,7:7:15.05:183,15,0	1/1:2,10:12:30.05:351,30,0	1/1:2,5:7:15.05:183,15,0	1/1:2,10:11:21.07:256,21,0	1/1:0,8:7:18.06:218,18,0	1/1:0,6:5:15.05:182,15,0	1/1:0,7:6:9.03:110,9,0	1/1:1,8:7:18.06:219,18,0	1/1:1,5:5:9.03:110,9,0	./.	1/1:2,6:5:12.04:148,12,0	1/1:1,6:7:12.04:143,12,0	./.	1/1:0,6:6:12.04:147,12,0	1/1:1,4:5:6.02:73,6,0	1/1:0,2:2:6.02:73,6,0	1/1:0,4:4:11.97:128,12,0	1/1:0,10:9:27.08:332,27,0	1/1:0,4:4:12.04:147,12,0	1/1:0,2:2:6.02:74,6,0
chr10	50956742	.	AGT	A	249.82	PASS	AB=0.887;AC=14;AF=0.259;AN=54;BaseQRankSum=3.130;DP=592;FS=1.678;HRun=0;HaplotypeScore=123.5346;InbreedingCoeff=-0.0160;MQ=63.65;MQ0=6;MQRankSum=0.506;QD=1.03;ReadPosRankSum=1.929;VQSLOD=2.5131;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:10.24:0,10,59	0/0:7,0:7:9.01:0,9,93	./.	0/0:29,0:18:11.98:0,12,134	0/1:28,4:33:31.81:32,0,573	0/0:19,0:19:2.37:0,2,8	0/0:18,0:18:3.85:0,4,27	0/0:31,0:31:21.76:0,22,344	0/0:12,0:12:3:0,3,26	0/1:19,3:22:55.24:55,0,518	0/0:18,0:20:9.97:0,10,307	1/1:25,0:26:2.64:12,3,0	0/0:26,0:26:2.50:0,3,50	0/1:18,4:22:35.92:36,0,362	0/0:25,0:25:2.72:0,3,26	0/0:20,0:20:11.74:0,12,94	0/1:18,2:19:26.84:27,0,503	0/1:17,6:24:99:144,0,324	0/0:21,0:20:17.43:0,17,155	0/0:18,0:18:9.01:0,9,104	1/1:12,0:28:1.25:3,1,0	0/0:9,0:9:2.80:0,3,13	0/1:11,0:11:0:0,0,0	1/1:24,0:23:2.98:21,3,0	0/1:21,1:23:37.70:38,0,512	0/0:16,1:17:1.62:0,2,468	0/0:24,0:26:25.12:0,25,276	0/1:8,0:9:15.08:15,0,185
chr10	50956752	.	T	TGTGTGTGTGC	3125.24	PASS	AB=0.902;AC=21;AF=0.375;AN=56;BaseQRankSum=7.126;DP=680;FS=6.181;HRun=0;HaplotypeScore=185.8770;InbreedingCoeff=-0.0304;MQ=51.26;MQ0=11;MQRankSum=-5.359;QD=7.70;ReadPosRankSum=1.941;VQSLOD=2.3339;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:13,19:38:27.50:88,0,27	0/1:8,0:8:11.93:220,0,12	0/0:26,0:7:6:0,6,56	0/0:38,0:11:20.49:0,20,161	0/0:32,0:32:50.38:0,50,1192	0/1:19,0:19:18.92:89,0,19	0/1:22,0:22:57.01:97,0,57	0/1:28,0:28:84:288,0,84	1/1:14,0:14:4.57:126,5,0	0/1:29,0:29:88.30:88,0,1055	0/0:21,0:21:27.08:0,27,682	0/0:4,25:31:2.65:0,3,19	0/1:7,22:34:1.18:485,0,1	0/0:24,0:24:53.76:0,54,1048	0/1:26,0:26:13.82:14,0,107	0/1:28,0:28:30.40:229,0,30	0/0:20,0:19:54.07:0,54,1187	0/0:25,0:25:24.20:0,24,1154	0/1:22,0:21:87.27:371,0,87	1/1:15,0:15:13.62:314,14,0	0/1:33,0:33:79.15:79,0,83	0/1:3,9:13:11.25:125,0,11	1/1:17,0:17:12.92:191,13,0	1/1:4,25:33:2.97:137,3,0	0/0:23,0:23:51.15:0,51,1330	0/0:23,0:23:60.09:0,60,1103	0/1:26,0:25:67.03:356,0,67	0/0:11,0:10:29.97:0,30,593
chr10	50956768	.	T	TGTGTGTGTGC	2704.16	PASS	AB=0.958;AC=21;AF=0.375;AN=56;BaseQRankSum=3.334;DP=723;FS=14.480;HRun=0;HaplotypeScore=199.2126;InbreedingCoeff=0.0845;MQ=48.06;MQ0=17;MQRankSum=-3.783;QD=7.10;ReadPosRankSum=-0.770;VQSLOD=1.6168;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:33:33.11:33,0,70	1/1:0,7:9:9.03:315,9,0	0/0:32,0:10:17.98:0,18,155	0/0:54,0:13:26.36:0,26,242	0/0:36,0:36:65.63:0,66,1314	1/1:4,1:19:3.01:130,3,0	1/1:7,0:21:6.60:151,7,0	0/1:35,0:34:99:308,0,319	1/1:3,9:14:5.80:185,6,0	0/0:26,0:26:73.49:0,73,1180	0/0:23,0:23:39.05:0,39,772	0/0:30,0:30:23.56:0,24,190	0/1:32,0:32:99:259,0,147	0/0:27,0:27:54.05:0,54,1048	0/1:5,18:33:11.94:53,0,12	1/1:7,0:30:14.63:395,15,0	0/0:21,0:20:54.05:0,54,1204	0/0:28,0:28:57.86:0,58,1402	0/1:20,0:19:99:300,0,120	0/1:18,0:18:33.98:81,0,34	0/1:31,0:30:61.18:61,0,212	0/1:16,0:16:84.68:85,0,85	0/1:16,0:16:26.94:27,0,99	0/1:29,0:28:40.85:94,0,41	0/0:26,0:26:60.11:0,60,1443	0/0:27,0:27:77.63:0,78,1238	0/1:25,0:24:99:405,0,99	0/0:11,0:10:27:0,27,560
chr10	50958518	.	A	AGT	22629.74	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-16.762;DP=732;FS=6.223;HRun=0;HaplotypeScore=77.3744;InbreedingCoeff=0.9748;MQ=88.07;MQ0=1;MQRankSum=-7.487;QD=45.81;ReadPosRankSum=2.002;VQSLOD=6.3067;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,37:40:99:2032,114,0	1/1:2,11:13:30.09:540,30,0	0/0:23,0:23:45.63:0,46,700	0/0:36,0:36:90.22:0,90,1192	0/0:25,0:25:66.22:0,66,918	1/1:0,29:31:84.29:1493,84,0	1/1:1,22:24:48.16:864,48,0	1/1:2,28:31:87.27:1482,87,0	1/1:2,19:20:54.19:972,54,0	0/0:21,0:21:60.20:0,60,838	0/0:14,0:14:39.13:0,39,546	1/1:1,25:26:72.25:1297,72,0	1/1:1,42:43:99:1998,111,0	0/0:28,0:28:81.25:0,81,1111	1/1:2,39:41:99:1837,102,0	1/1:3,26:30:69.24:1243,69,0	0/0:33,0:33:93.31:0,93,1296	0/0:12,0:12:36.09:0,36,484	1/1:8,30:39:99:1699,99,0	1/1:1,23:25:69.24:1237,69,0	1/1:1,29:32:81.28:1459,81,0	1/1:0,32:31:84.28:1511,84,0	1/1:0,17:19:51.17:916,51,0	1/1:0,20:20:54.19:973,54,0	0/0:22,0:22:66.21:0,66,908	0/0:23,0:23:63.21:0,63,880	1/1:3,23:27:60.21:1078,60,0	0/0:1,0:1:3.01:0,3,42
chr10	50958792	.	CAGA	C	5369.40	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=13.949;DP=652;FS=24.894;HRun=0;HaplotypeScore=89.1071;InbreedingCoeff=0.9874;MQ=85.54;MQ0=0;MQRankSum=-4.829;QD=40.37;ReadPosRankSum=3.717;VQSLOD=3.7896;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,28:31:63.21:1074,63,0	0/0:12,0:12:36.12:0,36,830	0/0:26,0:26:75.26:0,75,1672	0/0:17,0:17:51.13:0,51,1060	0/0:25,0:25:75.26:0,75,1729	0/0:22,0:22:66.23:0,66,1522	0/0:17,0:17:48.16:0,48,1101	0/0:45,0:45:99:0,135,3072	0/0:20,0:20:60.19:0,60,1340	0/0:36,0:36:99:0,105,2423	0/0:21,0:21:57.20:0,57,1314	1/1:1,33:34:87.30:1483,87,0	1/1:1,17:18:42.14:716,42,0	0/0:23,0:23:66.23:0,66,1503	0/0:15,0:15:45.15:0,45,1038	0/0:33,0:33:99:0,99,2175	0/0:18,0:18:54.19:0,54,1224	0/0:17,0:17:51.18:0,51,1170	0/0:21,0:21:60.18:0,60,1337	0/0:36,0:36:99:0,105,2377	0/0:20,0:20:60.20:0,60,1301	1/1:0,21:20:51.17:869,51,0	1/1:1,18:19:51.17:869,51,0	1/1:0,10:10:21.07:358,21,0	0/0:26,0:26:78.27:0,78,1794	0/0:24,0:24:69.23:0,69,1535	0/0:42,0:42:99:0,123,2726	0/0:3,0:3:9.03:0,9,208
chr10	50958907	.	T	TAA	15363.84	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=10.343;DP=653;FS=1.330;HRun=6;HaplotypeScore=106.5929;InbreedingCoeff=0.9949;MQ=77.67;MQ0=0;MQRankSum=-2.914;QD=41.98;ReadPosRankSum=-0.189;VQSLOD=3.4946;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,8:9:21.03:324,21,0	1/1:1,9:10:21.07:355,21,0	0/0:20,0:20:44.91:0,45,512	0/0:9,0:9:18.06:0,18,217	0/0:32,0:32:93.29:0,93,1134	1/1:0,25:25:69.24:1167,69,0	1/1:3,10:14:39.06:577,39,0	1/1:7,28:36:93.17:1420,93,0	0/0:23,0:23:54.11:0,54,620	0/0:33,0:33:93.28:0,93,1126	0/0:19,0:19:57.18:0,57,695	1/1:7,18:26:63.14:990,63,0	1/1:6,24:30:78.21:1260,78,0	0/0:29,0:29:78.22:0,78,937	1/1:2,17:19:48.16:811,48,0	1/1:2,30:32:87.25:1440,87,0	0/0:20,0:20:54.17:0,54,659	0/0:25,0:25:57.13:0,57,678	1/1:5,15:20:42.14:684,42,0	1/1:1,34:35:99:1630,102,0	1/1:0,5:5:15.05:254,15,0	1/1:1,28:29:84.20:1358,84,0	1/1:5,18:23:51.15:863,51,0	1/1:3,9:12:24.08:406,24,0	0/0:35,0:35:99:0,105,1280	0/0:30,0:30:87.27:0,87,1061	1/1:2,39:40:99:1824,108,0	0/0:12,0:12:23.92:0,24,239
chr10	50959596	.	AGTCT	A	5052.12	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=16.335;DP=590;FS=2.191;HRun=0;HaplotypeScore=140.9579;InbreedingCoeff=0.9937;MQ=70.41;MQ0=0;MQRankSum=-15.608;QD=34.14;ReadPosRankSum=3.060;VQSLOD=5.1964;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,9:15:30.05:403,30,0	1/1:1,3:4:12.04:174,12,0	0/0:19,0:18:32.86:0,33,1133	0/0:21,0:18:51.14:0,51,1197	0/0:29,0:29:87.30:0,87,2421	0/0:24,0:24:72.25:0,72,1998	0/0:25,0:25:75.26:0,75,2047	0/0:26,0:26:78.27:0,78,2144	0/0:17,0:17:51.18:0,51,1416	0/0:28,0:28:81.28:0,81,2256	0/0:26,0:26:78.27:0,78,2121	1/1:4,17:21:54.17:741,54,0	1/1:3,16:19:51.16:710,51,0	0/0:26,0:26:75.26:0,75,2092	1/1:3,18:20:54.18:751,54,0	1/1:0,14:14:42.14:599,42,0	0/0:24,0:24:69.24:0,69,1897	0/0:27,0:27:81.28:0,81,2263	0/0:23,0:23:69.24:0,69,1904	0/0:26,0:26:78.27:0,78,2147	0/0:13,0:13:39.13:0,39,1057	1/1:0,21:23:60.20:857,60,0	1/1:3,17:20:42.14:596,42,0	1/1:4,7:11:18.02:220,18,0	0/0:22,0:22:66.23:0,66,1847	0/0:32,0:32:93.32:0,93,2551	0/0:20,0:20:60.21:0,60,1643	0/0:14,0:14:42.14:0,42,1175
chr10	50959602	.	ATGGAG	A	6242.65	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=16.409;DP=585;FS=0.784;HRun=0;HaplotypeScore=147.7856;InbreedingCoeff=0.9925;MQ=70.86;MQ0=0;MQRankSum=-16.104;QD=48.02;ReadPosRankSum=4.148;VQSLOD=5.2981;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,9:9:27.09:474,27,0	1/1:1,3:4:12.04:217,12,0	0/0:18,0:17:48.64:0,49,1415	0/0:21,0:18:51.12:0,51,1484	0/0:29,0:29:87.30:0,87,2893	0/0:24,0:24:72.25:0,72,2358	0/0:22,0:22:66.21:0,66,2049	0/0:29,0:29:87.30:0,87,2818	0/0:18,0:18:54.17:0,54,1724	0/0:29,0:29:87.29:0,87,2828	0/0:26,0:26:78.27:0,78,2541	1/1:0,17:17:51.17:894,51,0	1/1:1,16:17:48.16:846,48,0	0/0:27,0:27:81.26:0,81,2532	1/1:1,18:18:54.18:937,54,0	1/1:1,14:15:45.15:785,45,0	0/0:22,0:22:66.23:0,66,2120	0/0:28,0:28:84.25:0,84,2586	0/0:26,0:26:78.24:0,78,2396	0/0:31,0:31:93.32:0,93,3045	0/0:13,0:13:39.13:0,39,1244	1/1:2,21:23:60.21:1058,60,0	1/1:2,17:19:45.15:782,45,0	1/1:0,7:7:15.05:250,15,0	0/0:25,0:25:75.24:0,75,2356	0/0:33,0:33:96.33:0,96,3198	0/0:20,0:20:60.21:0,60,1999	0/0:14,0:14:42.14:0,42,1399
chr10	50959606	.	AG	A	2825.89	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=16.549;DP=593;FS=2.179;HRun=2;HaplotypeScore=114.6892;InbreedingCoeff=0.9923;MQ=72.74;MQ0=1;MQRankSum=-15.895;QD=20.93;ReadPosRankSum=3.182;VQSLOD=3.7833;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:9,0:9:26.97:222,27,0	1/1:4,1:4:11.99:103,12,0	0/0:19,0:18:49.59:0,50,729	0/0:25,0:22:61.62:0,62,867	0/0:34,0:34:99:0,102,1511	0/0:23,0:23:69.23:0,69,1033	0/0:23,0:23:66.18:0,66,942	0/0:31,0:31:90.30:0,90,1331	0/0:19,0:19:57.19:0,57,847	0/0:28,0:28:84.28:0,84,1259	0/0:25,0:25:75.23:0,75,1084	1/1:17,2:19:53.94:449,54,0	1/1:16,3:19:50.57:421,51,0	0/0:26,0:26:75.25:0,75,1122	1/1:18,0:18:53.93:443,54,0	1/1:16,0:16:47.94:407,48,0	0/0:21,0:21:63.17:0,63,901	0/0:25,0:25:75.25:0,75,1123	0/0:28,0:28:81.26:0,81,1192	0/0:31,0:31:90.30:0,90,1349	0/0:12,0:12:36.12:0,36,538	1/1:22,0:22:59.93:497,60,0	1/1:18,2:20:47.91:388,48,0	1/1:7,0:7:14.82:110,15,0	0/0:22,0:22:66.22:0,66,989	0/0:32,0:32:96.33:0,96,1439	0/0:20,0:20:60.20:0,60,899	0/0:14,0:14:42.14:0,42,629
chr10	50960094	.	G	GT	4055.83	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=10.585;DP=545;FS=1.209;HRun=9;HaplotypeScore=63.4952;InbreedingCoeff=0.9295;MQ=73.12;MQ0=0;MQRankSum=0.556;QD=22.79;ReadPosRankSum=-1.343;VQSLOD=4.0430;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,1:25:35.78:0,36,535	1/1:1,5:6:12.03:133,12,0	0/1:17,0:16:4.12:4,0,172	0/0:11,0:11:24.43:0,24,203	0/0:27,0:26:74.97:0,75,648	0/0:20,0:20:56.14:0,56,461	0/0:8,0:8:17.95:0,18,145	1/1:7,23:30:43.10:685,43,0	0/0:15,0:15:38.98:0,39,336	0/0:31,0:31:71.95:0,72,618	0/0:23,0:23:62.97:0,63,544	0/0:19,0:20:47:0,47,392	0/0:27,0:27:77.89:0,78,665	0/0:23,0:23:62.96:0,63,541	1/1:0,17:17:48.13:531,48,0	1/1:2,18:20:28.09:538,28,0	0/0:17,0:17:41.91:0,42,356	0/0:12,0:12:24.87:0,25,207	1/1:3,15:19:24.92:484,25,0	1/1:2,22:24:62.91:674,63,0	1/1:2,7:9:18.05:199,18,0	0/0:17,0:17:38.96:0,39,335	0/0:15,0:15:41.99:0,42,364	0/0:10,0:10:26.98:0,27,232	0/0:18,0:20:55.91:0,56,461	0/0:26,0:26:71.98:0,72,623	1/1:7,28:36:54.98:807,55,0	0/0:20,0:20:56.99:0,57,495
chr10	50961800	.	TA	T	7059.57	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=14.572;DP=673;FS=5.337;HRun=2;HaplotypeScore=64.2251;InbreedingCoeff=0.9995;MQ=78.77;MQ0=0;MQRankSum=-1.008;QD=34.44;ReadPosRankSum=3.137;VQSLOD=5.3688;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,29:29:75.24:973,75,0	0/0:10,0:10:30.09:0,30,429	0/0:18,0:17:45.11:0,45,633	0/0:13,0:13:39.13:0,39,555	0/0:26,0:26:75.23:0,75,1083	1/1:0,21:21:54.18:700,54,0	1/1:0,18:18:48.16:623,48,0	0/0:29,0:29:81.25:0,81,1154	0/0:29,0:29:87.26:0,87,1262	0/0:29,0:29:84.25:0,84,1234	0/0:38,0:38:99:0,111,1603	1/1:0,26:26:72.23:934,72,0	1/1:0,26:26:72.23:934,72,0	0/0:11,0:11:30.10:0,30,449	0/0:28,0:28:81.27:0,81,1195	0/0:31,0:31:93.29:0,93,1356	0/0:15,0:15:42.14:0,42,629	0/0:16,0:16:45.04:0,45,644	0/0:16,0:16:48.15:0,48,685	0/0:46,0:46:99:0,135,1937	0/0:14,0:14:39.12:0,39,565	1/1:1,27:28:75.16:951,75,0	1/1:0,34:34:96.31:1244,96,0	1/1:0,23:23:54.18:701,54,0	0/0:29,0:29:84.28:0,84,1241	0/0:29,0:29:87.27:0,87,1250	0/0:33,0:33:99:0,99,1433	0/0:8,0:8:24.08:0,24,359
chr10	50962015	.	AT	A	4720.67	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=12.034;DP=640;FS=0.336;HRun=8;HaplotypeScore=79.5749;InbreedingCoeff=0.9930;MQ=81.64;MQ0=0;MQRankSum=-1.283;QD=23.49;ReadPosRankSum=-0.196;VQSLOD=5.1496;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:69.19:0,69,820	1/1:0,8:8:18.01:174,18,0	0/0:25,0:25:65.85:0,66,740	0/0:15,1:16:24.12:0,24,238	0/0:30,0:30:81.24:0,81,963	0/0:22,1:23:31.24:0,31,643	0/0:17,0:17:45.12:0,45,530	1/1:7,33:40:99:948,99,0	0/0:27,0:27:72.21:0,72,858	0/0:30,0:30:81.24:0,81,963	0/0:20,0:20:51.16:0,51,616	0/0:19,0:19:57.13:0,57,672	0/0:26,0:26:75.17:0,75,866	0/0:12,0:12:33.10:0,33,398	1/1:2,20:22:51.08:493,51,0	1/1:4,36:40:56.91:833,57,0	0/0:30,0:30:84.22:0,84,988	0/0:19,0:19:48.15:0,48,578	1/1:4,17:21:51.07:487,51,0	1/1:1,26:27:72.06:686,72,0	1/1:0,15:15:42.07:406,42,0	0/0:23,0:23:63.17:0,63,736	0/0:32,0:32:72.18:0,72,844	0/0:18,0:18:51.15:0,51,605	0/0:21,0:21:60.17:0,60,715	0/0:19,0:19:51.16:0,51,616	1/1:3,25:28:72.11:695,72,0	0/0:5,0:5:12.04:0,12,145
chr10	50963478	.	TA	T	5063.59	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=14.463;DP=655;FS=2.827;HRun=7;HaplotypeScore=61.3880;InbreedingCoeff=0.9937;MQ=74.79;MQ0=0;MQRankSum=-1.259;QD=26.51;ReadPosRankSum=0.053;VQSLOD=5.4922;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:78.25:0,78,981	1/1:1,8:9:21.05:214,21,0	0/0:16,0:16:39.04:0,39,465	0/0:7,0:7:11.77:0,12,125	0/0:37,0:37:99:0,108,1353	0/0:27,0:27:78.23:0,78,967	0/0:21,0:21:60.19:0,60,755	1/1:5,21:26:63.10:628,63,0	0/0:23,0:23:69.22:0,69,865	0/0:35,0:35:93.30:0,93,1169	0/0:36,0:36:90.29:0,90,1132	0/0:23,0:23:66.21:0,66,830	0/0:26,0:26:75.24:0,75,941	0/0:17,0:17:48.15:0,48,604	1/1:2,31:33:87.19:888,87,0	1/1:2,23:25:63.14:643,63,0	0/0:23,0:23:57.18:0,57,717	0/0:12,0:12:36.10:0,36,439	1/1:0,20:20:60.14:612,60,0	1/1:5,29:34:84.19:857,84,0	1/1:1,18:19:54.12:551,54,0	0/0:25,0:25:69.21:0,69,857	0/0:22,0:22:63.20:0,63,792	0/0:21,0:21:51.15:0,51,629	0/0:29,0:29:72.23:0,72,906	0/0:29,0:29:84.27:0,84,1057	1/1:4,21:25:66.14:671,66,0	0/0:9,0:9:27.08:0,27,328
chr10	50963932	.	TAGAGAGATAAGTGGTGCCCA	T	12893.82	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=13.622;DP=470;FS=0.000;HRun=0;HaplotypeScore=255.4408;InbreedingCoeff=0.9774;MQ=83.59;MQ0=0;MQRankSum=-12.088;QD=151.69;ReadPosRankSum=3.073;VQSLOD=4.6152;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,118,9652	1/1:0,11:11:33.11:1886,33,0	0/0:16,0:16:48.16:0,48,2947	0/0:17,0:17:37.29:0,37,1823	0/0:25,0:25:72.23:0,72,6209	0/0:32,0:32:96.32:0,96,8177	0/0:17,0:17:51.18:0,51,4568	1/1:0,10:10:30.09:1473,30,0	0/0:15,0:15:45.15:0,45,3864	0/0:23,0:23:69.24:0,69,6157	0/0:19,0:19:57.18:0,57,4593	0/0:18,0:18:54.17:0,54,4426	0/0:14,0:14:42.14:0,42,3409	0/0:14,0:14:42.14:0,42,3673	1/1:0,11:11:33.11:1919,33,0	1/1:0,9:9:27.09:1571,27,0	0/0:15,0:15:42.12:0,42,3434	0/0:20,0:20:57.20:0,57,4178	1/1:0,5:5:15.02:453,15,0	1/1:0,21:21:60.16:2999,60,0	1/1:0,3:3:9.03:498,9,0	0/0:11,0:11:33.11:0,33,2965	0/0:20,0:20:60.18:0,60,4973	0/0:17,0:17:51.14:0,51,4050	0/0:23,0:23:69.22:0,69,6259	0/0:24,0:24:72.25:0,72,6337	1/1:0,15:15:36.12:2095,36,0	0/0:3,0:3:9.03:0,9,587
chr10	50964144	.	GA	G	6719.89	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=16.984;DP=655;FS=6.916;HRun=1;HaplotypeScore=82.4951;InbreedingCoeff=0.9960;MQ=85.30;MQ0=0;MQRankSum=-5.410;QD=37.54;ReadPosRankSum=2.233;VQSLOD=5.3586;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,120,1841	1/1:0,13:13:39.13:544,39,0	0/0:23,0:23:61.59:0,62,945	0/0:19,0:19:54.18:0,54,843	0/0:31,0:31:93.32:0,93,1478	0/0:22,0:22:63.21:0,63,1007	0/0:30,0:30:90.21:0,90,1360	1/1:0,28:28:81.25:1113,81,0	0/0:18,0:18:54.18:0,54,863	0/0:35,0:35:99:0,105,1651	0/0:20,0:20:54.18:0,54,858	0/0:31,0:31:90.31:0,90,1429	0/0:30,0:30:90.28:0,90,1392	0/0:27,0:27:81.26:0,81,1272	1/1:0,20:20:57.19:794,57,0	1/1:0,19:19:57.19:795,57,0	0/0:14,0:14:42.14:0,42,666	0/0:6,0:6:18.06:0,18,288	1/1:0,22:22:63.21:875,63,0	1/1:0,23:23:48.16:671,48,0	1/1:0,23:23:57.19:797,57,0	0/0:24,0:24:72.23:0,72,1124	0/0:22,0:22:66.20:0,66,1006	0/0:30,0:30:90.23:0,90,1359	0/0:15,0:15:45.14:0,45,697	0/0:32,0:32:90.28:0,90,1373	1/1:0,31:31:81.27:1131,81,0	0/0:5,0:5:15.05:0,15,240
chr10	50964606	.	G	GT	5815.84	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=16.883;DP=701;FS=9.831;HRun=8;HaplotypeScore=96.8976;InbreedingCoeff=0.9584;MQ=77.88;MQ0=0;MQRankSum=-0.959;QD=25.07;ReadPosRankSum=-2.898;VQSLOD=3.5052;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:78.04:0,78,714	1/1:2,10:12:24.02:260,24,0	0/0:15,0:15:0.38:0,0,190	0/0:20,0:20:33.64:0,34,322	0/0:27,0:27:72.01:0,72,654	0/0:25,0:25:69.04:0,69,631	0/0:19,0:19:54:0,54,486	1/1:10,26:36:78.18:872,78,0	0/0:29,0:29:74.99:0,75,672	0/0:24,0:24:60.01:0,60,547	0/0:32,0:32:80.88:0,81,741	0/0:28,0:28:78.01:0,78,705	0/0:22,0:22:48:0,48,435	0/0:19,0:19:51.03:0,51,467	1/1:12,28:40:57.06:823,57,0	1/1:3,22:26:38.69:685,39,0	0/0:38,0:38:99:0,99,897	0/0:17,0:17:50.99:0,51,456	1/1:10,24:35:70.36:825,70,0	1/1:2,30:32:78.14:970,78,0	1/1:1,22:23:51.11:677,51,0	0/0:24,0:24:66:0,66,594	0/0:22,0:22:65.94:0,66,586	0/0:11,0:11:29.97:0,30,266	0/0:20,0:20:51.02:0,51,467	0/0:25,0:25:63:0,63,573	1/1:6,21:28:46.79:704,47,0	0/0:23,0:23:66.03:0,66,604
chr10	50964885	.	TTGTGTGTGTGTGTGTGTGTG	T	506.90	PASS	AB=0.938;AC=15;AF=0.288;AN=52;BaseQRankSum=2.924;DP=533;FS=0.000;HRun=0;HaplotypeScore=220.4723;InbreedingCoeff=0.5347;MQ=67.66;MQ0=35;MQRankSum=-2.562;QD=2.85;ReadPosRankSum=-0.265;VQSLOD=2.2678;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:24:12.62:134,13,0	0/0:12,0:12:18.06:0,18,536	./.	0/1:38,0:23:0:0,0,0	0/0:11,0:11:9.03:0,9,467	0/1:17,0:20:12.24:163,0,12	./.	0/0:30,0:30:11.21:0,11,117	0/0:13,0:14:9.03:0,9,346	0/0:11,0:11:11.54:0,12,335	0/0:14,0:13:3.01:0,3,270	1/1:7,3:10:3.01:158,3,0	1/1:21,0:20:3.89:39,4,0	0/0:14,0:12:12.04:0,12,536	0/0:14,0:15:12.04:0,12,426	0/0:16,0:20:18.06:0,18,672	0/0:27,0:24:16.30:0,16,910	0/1:17,0:17:57.91:58,0,913	0/0:19,0:19:11.07:0,11,330	0/0:28,0:25:33.08:0,33,757	0/0:33,0:28:15.94:0,16,346	1/1:13,0:13:8.23:65,8,0	1/1:9,0:9:2.97:20,3,0	1/1:18,5:21:4.72:23,5,0	0/0:9,0:9:9.03:0,9,336	0/0:14,0:13:13.09:0,13,461	0/0:11,0:11:9.03:0,9,188	0/0:11,0:11:12.51:0,13,672
chr10	50966350	.	AAAC	A	6769.18	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=15.088;DP=462;FS=18.640;HRun=0;HaplotypeScore=84.3579;InbreedingCoeff=0.9802;MQ=67.97;MQ0=0;MQRankSum=-12.246;QD=43.12;ReadPosRankSum=-1.015;VQSLOD=4.5565;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:44.36:0,44,986	1/1:0,11:11:33.11:509,33,0	0/0:12,0:12:27.04:0,27,449	0/0:9,0:9:21.07:0,21,383	0/0:24,0:24:72.23:0,72,1462	0/0:10,0:10:30.10:0,30,619	0/0:15,0:15:45.12:0,45,849	1/1:7,26:33:99:1471,99,0	0/0:20,0:20:57.20:0,57,1215	0/0:16,0:16:48.16:0,48,956	0/0:22,0:22:63.20:0,63,1285	0/0:15,0:15:45.15:0,45,960	0/0:15,0:15:45.12:0,45,865	0/0:14,0:14:42.10:0,42,757	1/1:4,19:23:57.18:872,57,0	1/1:1,11:12:36.12:545,36,0	0/0:15,0:15:42.13:0,42,856	0/0:10,0:10:30.09:0,30,599	1/1:4,10:14:39.06:540,39,0	1/1:8,26:34:99:1517,102,0	1/1:1,2:3:6.02:93,6,0	0/0:15,0:15:45.14:0,45,921	0/0:22,0:22:66.11:0,66,1204	0/0:8,0:8:21.07:0,21,448	0/0:16,0:16:48.16:0,48,1025	0/0:21,0:21:63.22:0,63,1334	1/1:2,25:27:78.27:1222,78,0	0/0:8,0:8:24.08:0,24,512
chr10	50966382	.	AC	A	6085.84	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=15.922;DP=422;FS=5.187;HRun=1;HaplotypeScore=61.4890;InbreedingCoeff=0.9857;MQ=67.30;MQ0=0;MQRankSum=-8.070;QD=39.26;ReadPosRankSum=0.064;VQSLOD=5.3104;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:48.16:0,48,759	1/1:0,9:9:27.09:376,27,0	0/0:9,0:9:24.06:0,24,359	0/0:5,0:5:15.05:0,15,227	0/0:21,0:21:63.18:0,63,958	0/0:10,0:10:30.09:0,30,456	0/0:11,0:11:33.09:0,33,501	1/1:0,31:31:93.30:1284,93,0	0/0:14,0:14:42.14:0,42,671	0/0:17,0:17:51.17:0,51,816	0/0:23,0:23:69.21:0,69,1054	0/0:14,0:14:42.13:0,42,646	0/0:14,0:14:42.14:0,42,671	0/0:15,0:15:45.14:0,45,696	1/1:1,18:19:51.17:710,51,0	1/1:0,16:16:39.13:544,39,0	0/0:10,0:10:30.10:0,30,477	0/0:10,0:10:27.09:0,27,430	1/1:0,16:16:48.15:643,48,0	1/1:0,28:28:78.26:1088,78,0	1/1:0,4:4:8.94:101,9,0	0/0:11,0:11:33.10:0,33,504	0/0:13,0:13:39.13:0,39,623	0/0:7,0:7:21.06:0,21,310	0/0:17,0:17:51.17:0,51,815	0/0:18,0:18:54.17:0,54,839	1/1:0,32:32:96.32:1340,96,0	0/0:11,0:11:33.11:0,33,527
chr10	50966856	.	AAAAC	A	4413.49	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=12.005;DP=561;FS=0.000;HRun=0;HaplotypeScore=124.7242;InbreedingCoeff=0.6519;MQ=56.82;MQ0=15;MQRankSum=-9.953;QD=18.86;ReadPosRankSum=2.713;VQSLOD=4.4735;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:5.29:0,5,68	1/1:4,7:11:18.68:231,19,0	0/0:63,0:17:17.50:0,17,286	0/1:36,0:15:17.19:17,0,105	0/0:17,0:17:45.10:0,45,857	0/0:20,0:19:13.53:0,14,114	0/0:10,0:10:2.54:0,3,24	1/1:7,17:24:57.51:705,58,0	0/0:11,0:11:30.07:0,30,557	0/0:19,0:18:45.08:0,45,808	0/0:29,0:28:69.77:0,70,1404	1/1:11,0:11:1.44:16,1,0	0/1:21,0:20:9.94:10,0,52	0/0:10,0:10:13.06:0,13,132	1/1:3,25:28:63.28:927,63,0	1/1:4,15:19:45.13:635,45,0	0/0:24,0:24:67.03:0,67,1188	0/0:22,0:22:56.43:0,56,1158	1/1:11,11:20:41.73:505,42,0	1/1:6,15:21:42.12:567,42,0	1/1:3,2:5:8.96:88,9,0	0/1:14,0:14:56.72:59,0,57	0/0:27,0:27:9.57:0,10,91	0/0:12,0:12:3:0,3,26	0/0:15,0:15:42.09:0,42,793	0/0:25,0:25:75.20:0,75,1409	1/1:3,19:22:45:654,45,0	0/0:4,0:4:12.04:0,12,245
chr10	50966860	.	CAAA	C	4437.24	PASS	AB=0.950;AC=32;AF=0.571;AN=56;BaseQRankSum=9.494;DP=557;FS=2.288;HRun=13;HaplotypeScore=113.6918;InbreedingCoeff=0.8160;MQ=57.11;MQ0=14;MQRankSum=-6.930;QD=15.20;ReadPosRankSum=3.503;VQSLOD=3.7112;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,16:19:7.72:239,8,0	1/1:10,0:10:2.72:99,3,0	0/0:64,0:20:22.90:0,23,292	0/0:36,0:14:1.90:0,2,114	0/0:14,0:16:45.12:0,45,747	1/1:5,16:20:33.05:397,33,0	1/1:1,10:11:24.06:292,24,0	1/1:25,0:25:19.16:203,19,0	0/0:11,0:11:30.07:0,30,490	0/0:18,0:18:39.07:0,39,604	0/0:26,0:26:56.94:0,57,1107	1/1:1,10:11:24.07:286,24,0	1/1:2,19:20:36.08:435,36,0	0/1:8,1:9:10.86:11,0,244	1/1:29,0:29:55.30:350,55,0	1/1:18,0:18:42.06:248,42,0	0/0:22,0:23:57.14:0,57,979	0/0:21,0:23:61.38:0,61,1027	1/1:19,0:17:31.50:200,31,0	1/1:20,0:20:36.79:206,37,0	0/1:5,0:5:0.16:11,0,0	1/1:3,9:13:8.92:307,9,0	1/1:2,24:26:56.95:693,57,0	1/1:1,11:12:18.05:219,18,0	0/0:16,0:16:39.12:0,39,676	0/0:24,0:25:63.19:0,63,1096	1/1:23,0:22:23.69:242,24,0	0/0:3,0:4:12.02:0,12,196
chr10	50968180	.	CTG	C	118.66	PASS	AC=18;AF=0.692;AN=26;BaseQRankSum=2.261;DP=648;FS=9.031;HRun=0;HaplotypeScore=76.0879;InbreedingCoeff=0.3930;MQ=66.30;MQ0=19;MQRankSum=-0.754;QD=0.53;ReadPosRankSum=-0.452;VQSLOD=0.2737;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:33,0:32:3:31,3,0	./.	./.	./.	1/1:13,4:16:3.01:31,3,0	./.	1/1:34,0:32:1.55:4,2,0	./.	0/0:26,0:25:5.75:0,6,84	./.	./.	./.	1/1:26,0:25:2.84:14,3,0	0/0:17,0:17:3.01:0,3,43	./.	./.	1/1:28,4:32:6:63,6,0	1/1:20,1:22:5.76:45,6,0	1/1:18,0:19:2.84:14,3,0	./.	./.	0/0:17,0:16:3.01:0,3,41	1/1:14,0:14:1.25:3,1,0	./.	0/0:23,0:23:5.99:0,6,49	./.	1/1:24,0:26:2.84:14,3,0	./.
chr10	50968473	.	C	CTT	2311.93	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=5.829;DP=616;FS=1.179;HRun=8;HaplotypeScore=86.4507;InbreedingCoeff=0.9691;MQ=76.98;MQ0=0;MQRankSum=0.575;QD=13.44;ReadPosRankSum=-2.222;VQSLOD=0.8142;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:78.16:0,78,849	1/1:1,9:10:18.06:286,18,0	0/0:17,0:17:24.42:0,24,240	0/0:15,0:15:3.54:0,4,183	0/0:26,0:26:60.10:0,60,640	0/0:24,0:24:63.10:0,63,686	0/0:11,0:11:27.03:0,27,283	1/1:5,0:34:72.80:266,73,0	0/0:23,0:23:63.10:0,63,665	0/0:27,0:27:69.15:0,69,746	0/0:19,0:19:51.04:0,51,534	0/0:23,0:23:54.11:0,54,591	0/0:28,0:28:75.12:0,75,795	0/0:24,0:24:66.12:0,66,697	1/1:2,20:23:41.97:647,42,0	1/1:2,18:20:45.15:714,45,0	0/0:26,0:27:77.94:0,78,847	0/0:22,0:22:60.13:0,60,658	1/1:6,0:19:16.31:101,16,0	1/1:2,1:29:62.67:263,63,0	1/1:1,0:11:22.46:77,22,0	0/0:31,0:31:81.18:0,81,884	0/0:22,0:22:51.09:0,51,550	0/0:14,0:14:39.11:0,39,434	0/0:21,0:21:60.12:0,60,647	0/0:25,0:25:66.13:0,66,720	1/1:2,0:26:47.29:163,47,0	0/0:14,0:14:42.11:0,42,468
chr10	50968548	.	G	GA	4612.81	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-14.608;DP=621;FS=2.631;HRun=8;HaplotypeScore=70.4191;InbreedingCoeff=0.9730;MQ=72.66;MQ0=0;MQRankSum=-0.423;QD=27.46;ReadPosRankSum=1.696;VQSLOD=5.4947;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,31:34:87.26:1004,87,0	0/0:6,0:6:5.99:0,6,54	0/0:22,0:21:45.01:0,45,410	0/0:11,0:6:9.89:0,10,84	0/0:27,0:27:71.98:0,72,651	1/1:1,26:27:75.22:866,75,0	1/1:1,15:16:42.12:485,42,0	0/0:29,0:29:65.99:0,66,595	0/0:20,0:20:54.03:0,54,494	0/0:28,0:28:69.02:0,69,628	0/0:25,0:25:66.03:0,66,604	1/1:5,17:22:28.25:519,28,0	1/1:5,20:25:53.95:620,54,0	0/0:24,0:24:66.03:0,66,601	0/0:20,0:20:39.01:0,39,357	0/0:16,0:16:42.02:0,42,384	0/0:29,0:29:84.05:0,84,768	0/0:18,0:18:53.98:0,54,486	0/0:20,0:20:51.01:0,51,467	0/0:32,0:32:81.03:0,81,740	0/0:29,0:29:81.04:0,81,741	1/1:2,17:19:42.08:470,42,0	1/1:3,14:17:39.11:442,39,0	1/1:1,7:8:18.05:208,18,0	0/0:27,0:27:78.04:0,78,714	0/0:19,0:19:51.02:0,51,466	0/0:30,0:30:75.02:0,75,682	0/0:21,0:21:51.02:0,51,467
chr10	50970113	.	G	GA	5784.16	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-2.392;DP=675;FS=2.385;HRun=6;HaplotypeScore=70.1321;InbreedingCoeff=0.9985;MQ=73.88;MQ0=2;MQRankSum=0.039;QD=31.78;ReadPosRankSum=-0.575;VQSLOD=5.0832;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:87.18:0,87,881	1/1:3,12:15:30.10:377,30,0	0/0:20,0:18:46.30:0,46,438	0/0:17,0:16:36.07:0,36,361	0/0:27,0:27:75.16:0,75,759	0/0:33,0:33:96.01:0,96,961	0/0:21,0:21:60.13:0,60,607	1/1:2,31:33:93.27:1140,93,0	0/0:21,0:21:63.14:0,63,638	0/0:36,0:36:99:0,102,1040	0/0:22,0:22:63.12:0,63,634	0/0:21,0:21:54.12:0,54,551	0/0:24,0:24:72.15:0,72,728	0/0:29,0:29:84.18:0,84,850	1/1:1,22:23:60.19:755,60,0	1/1:0,26:26:75.24:944,75,0	0/0:21,0:21:60.11:0,60,603	0/0:24,0:24:69.16:0,69,704	1/1:3,16:17:48.14:584,48,0	1/1:3,27:30:81.16:965,81,0	1/1:2,7:9:18.06:226,18,0	0/0:25,0:25:72.14:0,72,727	0/0:21,0:21:56.60:0,57,553	0/0:23,0:23:69.16:0,69,704	0/0:28,0:28:78.17:0,78,796	0/0:34,0:34:83.91:0,84,833	1/1:3,24:27:63.20:792,63,0	0/0:11,0:11:30.07:0,30,306
chr10	50970411	.	G	GA	4228.94	PASS	AB=0.586;AC=14;AF=0.250;AN=56;BaseQRankSum=18.314;DP=716;FS=9.430;HRun=0;HaplotypeScore=111.3525;InbreedingCoeff=0.8418;MQ=87.30;MQ0=0;MQRankSum=-3.830;QD=19.40;ReadPosRankSum=3.112;VQSLOD=6.7629;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,114,1533	1/1:2,7:9:13.81:187,14,0	0/0:20,0:20:54.18:0,54,755	0/0:33,0:33:90.30:0,90,1251	0/0:41,0:40:99:0,114,1594	0/0:25,0:25:75.21:0,75,1027	0/0:30,0:30:84.28:0,84,1174	0/1:9,19:28:16.95:394,0,17	0/0:27,0:27:81.25:0,81,1098	0/0:30,0:30:87.27:0,87,1173	0/0:15,0:15:45.15:0,45,629	0/0:28,0:28:81.27:0,81,1129	0/0:26,0:26:78.24:0,78,1052	0/0:27,0:27:78.26:0,78,1088	1/1:6,27:33:55.43:766,55,0	1/1:3,21:24:54.88:595,55,0	0/0:24,0:24:69.21:0,69,932	0/0:11,0:11:25.04:0,25,412	0/1:5,14:19:2.56:349,0,3	1/1:10,20:30:17.18:485,17,0	1/1:10,34:44:64.41:875,64,0	0/0:25,0:25:69.23:0,69,963	0/0:23,0:23:69.21:0,69,931	0/0:25,0:25:69.22:0,69,947	0/0:16,0:16:45.15:0,45,629	0/0:20,0:20:60.18:0,60,808	1/1:7,24:31:36.87:577,37,0	0/0:12,0:12:36.09:0,36,468
chr10	50970412	.	G	GTGA	8656.62	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=16.926;DP=713;FS=12.658;HRun=0;HaplotypeScore=125.5248;InbreedingCoeff=0.9673;MQ=88.12;MQ0=0;MQRankSum=-4.823;QD=40.45;ReadPosRankSum=1.929;VQSLOD=5.8230;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,111,2001	1/1:2,6:9:5.76:337,6,0	0/0:20,0:20:54.18:0,54,975	0/0:35,0:35:96.14:0,96,1653	0/0:40,0:39:99:0,114,2082	0/0:25,0:25:75.22:0,75,1363	0/0:30,0:30:90.27:0,90,1553	1/1:8,19:27:8.30:944,8,0	0/0:26,0:26:75.25:0,75,1368	0/0:30,0:30:87.27:0,87,1518	0/0:16,0:16:45.15:0,45,838	0/0:28,0:28:81.28:0,81,1497	0/0:26,0:26:78.24:0,78,1383	0/0:27,0:27:81.25:0,81,1405	1/1:6,27:33:71.85:1487,72,0	1/1:4,21:25:48.77:1130,49,0	0/0:24,0:24:69.21:0,69,1226	0/0:11,0:11:32.90:0,33,572	1/1:5,14:19:15.20:803,15,0	1/1:9,20:29:63.65:1033,64,0	1/1:8,34:42:68.74:1684,69,0	0/0:25,0:25:72.24:0,72,1310	0/0:23,0:23:66.22:0,66,1194	0/0:25,0:25:75.21:0,75,1276	0/0:16,0:16:48.16:0,48,866	0/0:20,0:20:60.18:0,60,1056	1/1:6,23:30:73.33:1237,73,0	0/0:12,0:12:36.10:0,36,611
chr10	50970708	.	TAA	T	4019.53	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=12.543;DP=582;FS=2.729;HRun=12;HaplotypeScore=95.9816;InbreedingCoeff=0.9391;MQ=75.49;MQ0=0;MQRankSum=0.459;QD=22.46;ReadPosRankSum=4.301;VQSLOD=3.5922;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,20:20:45.10:458,45,0	0/0:2,0:7:15.49:0,15,89	0/0:19,0:18:20.78:0,21,258	0/1:12,0:11:0.69:1,0,40	0/0:31,0:32:84.22:0,84,1189	1/1:6,26:32:72.11:732,72,0	1/1:3,13:17:32.79:317,33,0	0/0:8,0:27:52.72:0,53,224	0/0:16,0:16:45.13:0,45,624	0/0:20,0:21:57.18:0,57,802	0/0:15,0:17:46.60:0,47,572	1/1:2,21:23:54.12:549,54,0	1/1:3,24:27:69.14:702,69,0	0/0:13,0:13:33.09:0,33,470	0/0:3,0:26:52.40:0,52,184	0/0:3,1:18:10.42:0,10,117	0/0:30,0:31:84.26:0,84,1191	0/0:15,0:18:44.60:0,45,561	0/0:5,0:21:36.81:0,37,129	0/0:12,0:25:54.25:0,54,281	0/0:3,0:8:12.48:0,12,44	1/1:2,17:19:45.07:456,45,0	1/1:1,13:15:41.74:408,42,0	1/1:1,13:14:39.08:397,39,0	0/0:28,0:31:85.70:0,86,1097	0/0:23,1:24:32.67:0,33,812	0/0:4,0:32:69.75:0,70,245	0/0:15,0:16:44.62:0,45,601
chr10	50994082	.	A	AC	94.97	PASS	AB=0.911;AC=6;AF=0.200;AN=30;BaseQRankSum=3.616;DP=174;FS=39.837;HRun=0;HaplotypeScore=27.4945;InbreedingCoeff=0.3012;MQ=43.22;MQ0=38;MQRankSum=-2.933;QD=3.65;ReadPosRankSum=-3.507;VQSLOD=0.9716;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	1/1:0,1:1:3.01:48,3,0	0/0:8,0:1:3.01:0,3,42	./.	0/0:20,1:19:0.34:0,0,564	./.	./.	0/1:7,1:2:35.81:42,0,36	0/0:7,0:6:15.04:0,15,187	0/0:10,0:8:24.08:0,24,336	0/0:14,0:11:30.10:0,30,419	1/1:1,2:2:6.02:95,6,0	./.	0/0:10,0:8:21.07:0,21,294	./.	./.	0/0:18,0:18:51.17:0,51,711	0/0:11,0:10:30.10:0,30,420	./.	./.	0/0:7,0:3:6.02:0,6,84	./.	./.	./.	0/0:9,1:8:21.07:0,21,294	0/1:13,1:12:11.84:12,0,421	./.	0/0:6,0:6:18.06:0,18,252
chr10	50996173	.	C	CACCT	12510.39	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-10.812;DP=717;FS=4.991;HRun=0;HaplotypeScore=115.0235;InbreedingCoeff=0.9566;MQ=86.19;MQ0=3;MQRankSum=-6.287;QD=53.69;ReadPosRankSum=-0.851;VQSLOD=5.3095;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,102,1837	1/1:3,10:13:30.10:786,30,0	0/0:27,0:27:72.24:0,72,1270	0/0:24,0:24:66.05:0,66,1117	0/0:21,0:21:54.18:0,54,980	0/0:21,0:21:57.20:0,57,1049	0/0:31,0:31:81.26:0,81,1458	1/1:8,22:31:69.02:1588,69,0	0/0:27,1:28:2.04:0,2,1325	0/0:26,0:26:63.21:0,63,1130	0/0:16,0:16:39.10:0,39,653	0/0:38,0:38:99:0,114,2067	0/0:27,0:27:75.26:0,75,1374	0/0:26,0:26:72.25:0,72,1324	1/1:3,42:45:99:2865,111,0	1/1:1,25:25:9.27:1531,9,0	0/0:24,0:24:69.24:0,69,1269	0/0:14,0:14:42.14:0,42,772	1/1:10,16:28:78.12:1783,78,0	1/1:7,13:20:24.08:633,24,0	1/1:9,33:44:75.26:1978,75,0	0/0:20,0:20:41.86:0,42,671	0/0:11,0:11:24.08:0,24,431	0/0:43,0:43:99:0,123,2190	0/0:13,0:13:30.10:0,30,552	0/0:23,0:23:60.21:0,60,1092	1/1:0,22:21:51.18:1345,51,0	0/0:12,0:12:33.11:0,33,607
chr10	50997777	.	A	AG	17017.40	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=20.072;DP=700;FS=1.986;HRun=1;HaplotypeScore=135.4277;InbreedingCoeff=0.9994;MQ=88.76;MQ0=0;MQRankSum=-5.549;QD=40.04;ReadPosRankSum=1.510;VQSLOD=4.4942;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,49:50:99:2068,138,0	1/1:0,7:7:21.07:314,21,0	0/0:34,0:34:99:0,102,1274	0/0:20,0:20:60.18:0,60,736	0/0:25,0:25:75.23:0,75,959	1/1:2,24:26:69.23:1034,69,0	1/1:0,20:20:54.18:809,54,0	1/1:2,25:27:78.24:1140,78,0	0/0:29,0:29:84.22:0,84,1057	0/0:31,0:31:93.30:0,93,1208	0/0:15,0:15:45.15:0,45,584	1/1:2,31:33:84.28:1258,84,0	1/1:2,20:22:63.21:923,63,0	0/0:20,0:20:60.13:0,60,758	1/1:1,23:23:63.21:944,63,0	1/1:1,23:24:69.23:1033,69,0	0/0:22,0:22:39.56:0,40,753	0/0:19,0:19:57.19:0,57,739	1/1:1,20:21:60.20:899,60,0	1/1:0,24:24:63.21:944,63,0	1/1:4,35:39:99:1483,99,0	1/1:0,22:22:60.20:887,60,0	1/1:1,26:28:78.18:1140,78,0	1/1:3,27:30:78.13:1115,78,0	0/0:18,0:18:54.17:0,54,688	0/0:21,0:21:63.20:0,63,805	1/1:4,24:28:69.08:1027,69,0	0/0:21,0:21:63.20:0,63,817
chr10	50997905	.	T	TAC	2984.54	PASS	AB=0.794;AC=22;AF=0.393;AN=56;BaseQRankSum=1.324;DP=614;FS=3.093;HRun=0;HaplotypeScore=123.6107;InbreedingCoeff=0.2504;MQ=55.99;MQ0=8;MQRankSum=-0.650;QD=8.91;ReadPosRankSum=0.219;VQSLOD=3.5646;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:20,14:34:92.58:367,0,93	1/1:3,2:5:6.02:90,6,0	0/0:16,0:7:2.94:0,3,33	0/0:18,0:7:3.01:0,3,32	0/0:17,0:19:0.68:0,1,209	0/0:7,0:19:28.41:0,28,140	0/0:17,0:27:19.89:0,20,98	1/1:17,1:18:8.98:96,9,0	0/0:22,0:22:24.06:0,24,265	0/0:22,0:24:17.82:0,18,180	0/0:16,0:18:26.71:0,27,244	1/1:7,13:20:27.09:407,27,0	1/1:10,6:17:15.01:225,15,0	0/0:19,0:21:20.89:0,21,212	0/1:17,8:25:21.11:124,0,21	0/1:13,9:23:56.32:202,0,56	0/0:33,1:36:3.67:0,4,558	0/0:22,0:24:37.79:0,38,378	1/1:11,1:12:6.49:91,6,0	1/1:11,5:16:8.79:135,9,0	0/1:27,11:38:99:241,0,103	0/1:20,7:27:19.31:390,0,19	0/1:9,3:13:21.23:123,0,21	0/1:32,7:41:43.94:430,0,44	0/0:20,0:21:32.90:0,33,336	0/1:21,1:22:21.17:21,0,188	1/1:9,10:21:15.05:226,15,0	0/0:12,0:12:16.20:0,16,177
chr10	50998275	.	T	TTGGTAGGTTCTTCCCATA	50111.01	PASS	AB=0.585;AC=31;AF=0.554;AN=56;BaseQRankSum=-0.518;DP=687;FS=8.500;HRun=0;HaplotypeScore=283.2808;InbreedingCoeff=0.8936;MQ=90.70;MQ0=0;MQRankSum=-19.012;QD=132.57;ReadPosRankSum=0.174;VQSLOD=3.0248;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,4:18:24.08:1712,24,0	1/1:1,1:4:6.02:480,6,0	0/0:33,0:33:94.39:0,94,3268	0/0:36,0:36:58.35:0,58,3267	0/0:27,0:27:78.27:0,78,3602	1/1:11,10:31:54.19:3928,54,0	1/1:7,2:18:27.09:1539,27,0	1/1:27,0:53:99:8794,159,0	0/0:25,0:25:72.25:0,72,3489	0/0:42,0:42:99:0,117,5581	0/0:23,0:23:66.23:0,66,3149	1/1:11,13:35:66.70:4931,67,0	1/1:9,8:31:51.18:3565,51,0	0/0:30,0:30:87.30:0,87,3906	1/1:5,8:18:39.13:2904,39,0	0/1:7,8:24:99:2563,0,273	0/0:23,0:23:63.22:0,63,2959	0/0:10,0:10:21.07:0,21,1008	1/1:10,3:24:69.24:3636,69,0	1/1:7,8:21:42.14:3104,42,0	1/1:5,2:9:6.02:391,6,0	1/1:8,8:23:45.15:3348,45,0	1/1:7,4:16:30.06:1876,30,0	1/1:7,3:13:27.09:1814,27,0	0/0:24,0:24:72.25:0,72,3246	0/0:30,0:30:87.30:0,87,4121	1/1:14,12:40:69.24:5524,69,0	0/0:6,0:6:12.04:0,12,624
chr10	50998676	.	T	TTATA	876.42	PASS	AB=1.000;AC=18;AF=0.429;AN=42;BaseQRankSum=6.816;DP=203;FS=0.929;HRun=0;HaplotypeScore=48.4196;InbreedingCoeff=0.7099;MQ=66.79;MQ0=0;MQRankSum=-2.307;QD=12.89;ReadPosRankSum=-3.694;VQSLOD=1.7735;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	1/1:3,1:4:6.01:98,6,0	./.	0/0:5,0:3:3.01:0,3,32	0/0:24,0:24:60.13:0,60,887	./.	0/1:1,0:1:0:0,0,0	1/1:27,1:28:21.43:406,21,0	0/0:13,0:13:33.11:0,33,556	0/0:12,0:12:30.10:0,30,490	0/0:10,0:10:24.08:0,24,400	1/1:4,0:5:6.01:75,6,0	1/1:5,0:5:2.99:24,3,0	0/0:3,0:3:9.03:0,9,154	./.	0/1:3,0:3:0:0,0,0	0/0:8,0:8:18.06:0,18,309	0/0:7,0:7:18.06:0,18,302	1/1:8,0:8:2.29:6,2,0	1/1:2,2:4:6.02:145,6,0	./.	1/1:2,0:2:3:26,3,0	./.	./.	0/0:4,0:4:9.01:0,9,127	0/0:12,0:12:30.09:0,30,488	1/1:4,3:8:12.03:244,12,0	0/0:18,0:18:45.15:0,45,757
chr10	51000051	.	A	AT	3614.14	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-2.823;DP=510;FS=2.484;HRun=7;HaplotypeScore=61.0558;InbreedingCoeff=0.9946;MQ=77.68;MQ0=0;MQRankSum=-0.068;QD=28.91;ReadPosRankSum=1.076;VQSLOD=4.4162;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,16:19:42.13:507,42,0	0/0:9,0:9:24.04:0,24,232	0/0:15,0:15:24.02:0,24,227	0/0:11,0:11:23.51:0,24,207	0/0:24,0:24:63.10:0,63,608	1/1:5,14:19:39.12:471,39,0	1/1:1,9:10:24.07:290,24,0	0/0:34,0:34:90.07:0,90,854	0/0:9,0:9:27.04:0,27,261	0/0:20,0:20:54.08:0,54,522	0/0:26,0:26:63.09:0,63,608	1/1:3,11:14:36.11:432,36,0	1/1:3,15:18:48.06:547,48,0	0/0:9,0:9:21.03:0,21,203	0/0:23,0:24:53.10:0,53,498	0/0:12,0:12:30.05:0,30,290	0/0:13,0:13:30.01:0,30,282	0/0:16,0:16:42.06:0,42,404	0/0:18,0:18:51.08:0,51,493	0/0:45,0:45:99:0,111,1071	0/0:14,0:14:27.04:0,27,261	1/1:2,11:13:36.11:434,36,0	1/1:4,21:25:69:752,69,0	1/1:0,7:7:15.05:181,15,0	0/0:20,0:20:54.09:0,54,522	0/0:26,0:26:66.10:0,66,637	0/0:17,0:17:39.01:0,39,367	0/0:23,0:23:60.09:0,60,579
chr10	51000121	.	T	TATTTTTTGTGTACTAGCAA	63319.67	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=2.815;DP=545;FS=1.057;HRun=0;HaplotypeScore=253.0974;InbreedingCoeff=0.9614;MQ=55.36;MQ0=0;MQRankSum=-16.563;QD=186.78;ReadPosRankSum=-1.175;VQSLOD=4.6040;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:13,2:15:36.10:1942,36,0	1/1:4,3:8:18.06:1332,18,0	0/0:9,0:9:27.04:0,27,634	0/0:4,0:4:9.03:0,9,379	0/0:33,0:33:99:0,99,4677	1/1:15,5:20:54.13:3829,54,0	1/1:5,5:11:30.10:2372,30,0	1/1:43,0:43:99:7436,129,0	0/0:13,0:13:36.12:0,36,1712	0/0:13,0:13:33.10:0,33,1624	0/0:30,0:30:90.29:0,90,4350	1/1:8,9:18:54.18:4173,54,0	1/1:20,9:30:90.27:7149,90,0	0/0:8,0:8:21.07:0,21,999	1/1:10,9:21:57.19:4146,57,0	1/1:7,7:17:41.99:3608,42,0	0/0:20,0:20:60.21:0,60,3002	0/0:15,0:15:36.12:0,36,1753	1/1:8,3:14:39.13:2299,39,0	1/1:22,11:39:99:7006,114,0	1/1:2,1:4:3.01:276,3,0	1/1:13,9:24:69.11:4701,69,0	1/1:20,13:33:96.20:5136,96,0	1/1:5,1:5:12.04:681,12,0	0/0:23,0:23:66.23:0,66,3038	0/0:21,0:21:63.22:0,63,3215	1/1:22,11:36:99:7234,99,0	0/0:17,0:17:42.09:0,42,1436
chr10	51001954	.	GA	G	11537.17	PASS	AB=0.538;AC=31;AF=0.554;AN=56;BaseQRankSum=19.437;DP=640;FS=14.538;HRun=3;HaplotypeScore=152.0535;InbreedingCoeff=0.9280;MQ=81.11;MQ0=0;MQRankSum=-6.292;QD=30.04;ReadPosRankSum=2.000;VQSLOD=2.9068;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,24:25:54.16:646,54,0	0/1:1,6:7:22.15:195,0,22	0/0:21,0:21:59.66:0,60,780	0/0:22,0:22:62.98:0,63,783	0/0:25,0:25:69.23:0,69,994	1/1:3,40:43:99:1192,102,0	1/1:1,19:20:51.16:612,51,0	1/1:6,28:34:92.76:1069,93,0	0/0:23,0:23:66.20:0,66,930	0/0:22,0:22:63.21:0,63,907	0/0:28,0:28:84.27:0,84,1190	1/1:0,15:15:42.13:501,42,0	1/1:0,25:25:66.20:785,66,0	0/0:18,0:18:54.15:0,54,740	1/1:0,24:24:63.19:756,63,0	1/1:1,21:22:48.15:576,48,0	0/0:25,0:25:69.02:0,69,958	0/0:11,0:11:32.84:0,33,420	1/1:2,20:21:60.18:718,60,0	1/1:3,37:40:99:1278,108,0	1/1:0,14:14:39.12:467,39,0	1/1:1,24:25:63.19:755,63,0	1/1:3,23:26:63.19:756,63,0	1/1:1,16:17:40.67:472,41,0	0/0:29,0:29:87.27:0,87,1233	0/0:23,0:23:69.23:0,69,992	1/1:2,23:25:64.44:759,64,0	0/0:9,0:9:27.09:0,27,389
chr10	51002497	.	TGTGGATTGTCTCA	T	10097.90	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=14.610;DP=561;FS=29.881;HRun=0;HaplotypeScore=216.9962;InbreedingCoeff=0.9968;MQ=88.00;MQ0=0;MQRankSum=-14.566;QD=82.10;ReadPosRankSum=0.200;VQSLOD=2.9402;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,14:17:35.69:1030,36,0	0/0:9,0:9:27.09:0,27,1766	0/0:24,0:23:63.17:0,63,2918	0/0:23,0:23:60.17:0,60,3278	0/0:25,0:25:72.21:0,72,4294	1/1:0,16:16:42.10:1565,42,0	1/1:3,14:16:30.02:991,30,0	0/0:33,0:32:90.31:0,90,5514	0/0:19,0:19:54.17:0,54,3204	0/0:35,0:35:95.94:0,96,5684	0/0:27,0:27:75.23:0,75,4405	1/1:2,13:15:36.12:1426,36,0	1/1:1,13:14:36.08:1250,36,0	0/0:15,0:15:45.15:0,45,2941	0/0:21,0:21:60.07:0,60,3493	0/0:17,0:17:51.17:0,51,3193	0/0:21,0:21:63.19:0,63,3925	0/0:21,0:21:57.13:0,57,3525	0/0:14,0:14:39.12:0,39,2147	0/0:22,0:22:66.23:0,66,3842	0/0:18,0:18:51.18:0,51,3344	1/1:2,23:23:63.18:2317,63,0	1/1:1,10:10:27.05:971,27,0	1/1:2,6:8:15.05:549,15,0	0/0:21,0:21:60.19:0,60,3397	0/0:26,0:26:75.25:0,75,4581	0/0:33,0:33:99:0,99,5846	0/0:14,0:14:39.13:0,39,2560
chr10	51003204	.	CAT	C	853.03	PASS	AB=1.000;AC=22;AF=0.458;AN=48;BaseQRankSum=3.563;DP=234;FS=1.027;HRun=0;HaplotypeScore=46.8802;InbreedingCoeff=0.5560;MQ=69.83;MQ0=1;MQRankSum=-2.277;QD=7.23;ReadPosRankSum=-1.509;VQSLOD=2.7034;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:13:1.55:4,2,0	./.	0/0:10,0:7:3.01:0,3,32	0/0:13,0:7:5.98:0,6,25	0/0:10,0:10:15.05:0,15,246	1/1:18,0:18:3:25,3,0	1/1:2,4:6:6.02:76,6,0	1/1:5,17:20:45.13:558,45,0	0/0:6,0:6:15.05:0,15,243	0/0:6,0:6:12.04:0,12,194	0/0:3,0:3:6.02:0,6,100	1/1:4,3:7:6.90:79,7,0	1/1:9,0:9:1.55:4,2,0	0/0:3,0:3:6.02:0,6,97	1/1:2,6:8:3.01:38,3,0	./.	0/0:15,0:15:30.10:0,30,468	0/0:7,0:7:5.93:0,6,68	0/1:6,0:6:6.85:32,0,7	./.	1/1:1,1:2:3.01:38,3,0	./.	1/1:6,4:10:3.01:38,3,0	1/1:1,4:5:9.03:114,9,0	0/0:6,0:6:12.04:0,12,201	0/0:4,0:4:6.02:0,6,99	0/1:12,0:12:0:0,0,0	0/0:5,0:5:12.04:0,12,199
chr10	51003212	.	T	TATACATATACATA	1361.41	PASS	AB=0.851;AC=23;AF=0.479;AN=48;BaseQRankSum=4.553;DP=233;FS=1.939;HRun=0;HaplotypeScore=83.5450;InbreedingCoeff=0.3832;MQ=57.12;MQ0=1;MQRankSum=-3.205;QD=9.20;ReadPosRankSum=0.914;VQSLOD=1.4724;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:17:3.01:148,3,0	./.	0/0:6,0:3:3.01:0,3,32	0/1:12,0:6:12.57:16,0,13	0/0:9,0:9:15.05:0,15,286	1/1:3,1:23:3.01:143,3,0	1/1:7,0:7:4.82:74,5,0	0/1:25,0:23:9.14:375,0,9	0/0:7,0:7:15.05:0,15,420	0/0:5,0:5:15.05:0,15,352	0/0:2,0:2:6.02:0,6,100	1/1:7,0:8:8.76:164,9,0	1/1:0,0:8:3.01:133,3,0	0/0:2,0:2:6.02:0,6,166	1/1:7,0:7:3.01:38,3,0	./.	0/0:20,0:20:34.21:0,34,936	0/1:8,0:8:54.51:55,0,181	0/1:4,0:6:0.71:231,0,1	./.	1/1:1,0:1:3.01:38,3,0	./.	1/1:8,0:10:2.94:18,3,0	1/1:5,0:5:7.26:80,7,0	0/0:6,0:6:12.04:0,12,366	0/0:2,0:2:6.02:0,6,99	0/1:2,0:10:0:0,0,0	0/0:4,0:4:12.04:0,12,270
chr10	51003224	.	CAT	C	194.59	PASS	AB=0.933;AC=8;AF=0.211;AN=38;BaseQRankSum=-1.448;DP=190;FS=0.000;HRun=0;HaplotypeScore=54.0826;InbreedingCoeff=0.2498;MQ=49.68;MQ0=1;MQRankSum=4.406;QD=3.47;ReadPosRankSum=-0.239;VQSLOD=1.6019;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:1.71:0,2,5	./.	./.	./.	0/1:4,0:4:4.51:5,0,32	0/0:18,0:18:2.94:0,3,18	0/0:7,0:7:1.55:0,2,4	0/0:24,0:22:23.40:0,23,138	./.	0/0:3,0:3:5.79:0,6,38	./.	0/0:7,0:7:2.94:0,3,18	0/0:6,0:6:2.37:0,2,8	0/0:1,0:1:3:0,3,25	0/0:6,0:6:3:0,3,25	./.	1/1:6,16:23:21.06:241,21,0	0/1:7,0:10:0.55:30,0,1	0/0:2,0:2:2.97:0,3,20	0/0:7,0:7:1.55:0,2,4	./.	./.	0/1:10,0:10:0:0,0,0	0/0:5,0:5:1.55:0,2,4	1/1:5,0:5:4.82:17,5,0	./.	0/0:4,0:4:2.94:0,3,18	0/1:3,0:3:5.14:5,0,17
chr10	51003252	.	TAGAGAGAG	T	38.58	PASS	AC=10;AF=0.227;AN=44;BaseQRankSum=2.357;DP=192;FS=7.455;HRun=0;HaplotypeScore=71.2922;InbreedingCoeff=0.4198;MQ=53.77;MQ0=3;MQRankSum=-1.901;QD=0.73;ReadPosRankSum=0.969;VQSLOD=0.2971;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,3:7:1.83:6,2,0	./.	./.	0/0:14,0:5:5.85:0,6,53	0/0:6,0:5:15.05:0,15,526	1/1:21,0:23:0.68:104,1,0	1/1:9,0:12:2.88:15,3,0	0/0:19,0:19:24.08:0,24,723	0/0:2,0:2:3.01:0,3,100	0/0:4,0:5:5.78:0,6,28	0/0:3,0:2:6.02:0,6,101	0/0:2,6:8:0:0,0,0	1/1:4,0:4:2.74:12,3,0	0/0:3,0:3:9.03:0,9,175	0/0:6,0:6:15.05:0,15,471	./.	0/0:27,0:27:48.16:0,48,1472	0/0:13,0:12:21.07:0,21,613	0/0:3,0:2:3.01:0,3,60	0/0:3,0:3:3.01:0,3,104	./.	./.	1/1:2,5:7:0.94:2,1,0	0/0:2,2:4:2.76:0,3,14	0/0:6,0:6:9.03:0,9,183	./.	0/0:4,0:4:6.02:0,6,209	0/0:3,0:3:6.02:0,6,109
chr10	51003603	.	TAG	T	8977.97	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=6.297;DP=510;FS=10.625;HRun=0;HaplotypeScore=94.2568;InbreedingCoeff=0.9730;MQ=79.76;MQ0=9;MQRankSum=-4.357;QD=30.23;ReadPosRankSum=4.688;VQSLOD=6.1887;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,15:22:43.71:682,44,0	1/1:0,3:3:9.03:138,9,0	0/0:36,0:22:53.23:0,53,747	0/0:44,0:33:47.04:0,47,671	0/0:10,0:10:30.09:0,30,511	1/1:2,38:39:65.64:1008,66,0	1/1:2,27:30:57.19:871,57,0	1/1:0,25:26:75.25:1134,75,0	0/0:8,0:8:21.07:0,21,397	0/0:18,0:18:48.16:0,48,906	0/0:10,0:10:22.71:0,23,463	1/1:6,8:13:36.12:528,36,0	1/1:1,19:19:33.11:505,33,0	0/0:13,0:13:33.10:0,33,584	1/1:0,11:11:27.09:412,27,0	1/1:0,20:20:33.11:505,33,0	0/0:16,0:16:40.69:0,41,710	0/0:14,0:14:38.87:0,39,673	1/1:1,11:11:33.09:479,33,0	1/1:0,7:7:18.06:276,18,0	1/1:1,27:28:42.14:643,42,0	1/1:5,8:12:27.08:391,27,0	1/1:4,5:9:6.02:92,6,0	1/1:1,20:20:41.65:617,42,0	0/0:9,0:9:27.09:0,27,515	0/0:14,0:14:39.11:0,39,709	1/1:1,20:21:16.51:696,17,0	0/0:14,0:14:42.14:0,42,763
chr10	51003688	.	TCG	T	991.81	PASS	AB=1.000;AC=34;AF=0.607;AN=56;BaseQRankSum=5.891;DP=456;FS=4.233;HRun=0;HaplotypeScore=95.0235;InbreedingCoeff=0.3308;MQ=30.83;MQ0=121;MQRankSum=-4.773;QD=3.53;ReadPosRankSum=-1.530;VQSLOD=1.7335;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:13:2.85:20,3,0	1/1:12,0:10:17.71:112,18,0	0/0:49,0:3:4.56:0,5,38	0/0:56,0:5:0.29:0,0,15	0/0:19,0:15:16.55:0,17,113	1/1:24,1:21:26.61:170,27,0	1/1:19,0:17:20.62:128,21,0	1/1:7,4:4:11.43:72,11,0	0/0:11,0:11:14.31:0,14,81	0/1:19,0:14:29.21:29,0,178	0/1:12,0:10:23.27:59,0,23	1/1:9,0:9:11.78:73,12,0	1/1:12,0:10:20.52:125,21,0	0/0:17,0:14:10.51:0,11,63	1/1:8,0:6:2.94:25,3,0	1/1:15,1:15:2.30:18,2,0	0/1:19,0:16:22.91:65,0,23	0/1:15,0:10:58.11:58,0,89	1/1:5,4:4:11.72:85,12,0	1/1:11,0:9:2.88:19,3,0	0/0:9,0:6:0:0,0,0	1/1:9,1:9:2.94:18,3,0	0/1:19,0:16:0:0,0,0	1/1:19,0:13:4.96:33,5,0	0/0:9,0:6:1.82:0,2,5	0/1:14,0:12:1.15:1,0,124	1/1:7,0:7:8.14:47,8,0	0/0:5,0:2:5.99:0,6,60
chr10	51003696	.	TCACACACACACACACACACA	T	781.65	PASS	AB=0.771;AC=4;AF=0.074;AN=54;BaseQRankSum=2.377;DP=493;FS=4.512;HRun=0;HaplotypeScore=160.1131;InbreedingCoeff=0.0748;MQ=30.78;MQ0=123;MQRankSum=-4.114;QD=12.21;ReadPosRankSum=-1.251;VQSLOD=2.4445;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:13:3.48:0,3,119	0/0:12,0:10:18.06:0,18,1048	0/0:49,0:3:3:0,3,26	./.	0/0:20,0:17:15.05:0,15,1297	0/1:18,7:23:99:706,0,383	0/1:13,4:18:74.53:162,0,75	0/0:16,0:8:18.06:0,18,912	0/0:11,0:11:15.02:0,15,721	0/0:25,0:21:57.20:0,57,4155	0/0:14,0:12:6.02:0,6,430	0/0:10,0:11:11.63:0,12,369	0/0:14,0:11:23.93:0,24,844	0/0:17,0:14:14.06:0,14,694	0/0:9,0:7:3.01:0,3,225	0/0:20,0:18:7.16:0,7,337	0/0:21,0:17:9.03:0,9,638	0/0:15,0:9:21.07:0,21,1549	0/0:8,0:4:9.03:0,9,539	0/0:12,0:10:6.02:0,6,277	0/0:10,0:6:0:0,0,0	0/0:11,0:11:3.01:0,3,119	1/1:20,0:18:0.41:2,0,0	0/0:21,0:14:7.05:0,7,218	0/0:12,0:8:3.01:0,3,225	0/0:17,0:13:33.10:0,33,2206	0/0:7,0:7:9.03:0,9,269	0/0:3,0:2:6.02:0,6,564
chr10	51003739	.	G	GA	1244.30	PASS	AB=0.891;AC=15;AF=0.268;AN=56;BaseQRankSum=5.709;DP=450;FS=1.479;HRun=8;HaplotypeScore=108.3372;InbreedingCoeff=0.6937;MQ=48.61;MQ0=60;MQRankSum=-5.603;QD=8.30;ReadPosRankSum=-3.011;VQSLOD=1.2584;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,12:11:5.98:55,6,0	0/0:9,0:9:6:0,6,55	0/0:20,0:6:11.93:0,12,94	0/1:22,0:6:2.18:2,0,24	0/0:21,0:21:18:0,18,165	0/1:18,17:33:99:425,0,248	0/0:12,4:12:17.99:0,18,165	0/0:15,0:11:24.01:0,24,220	0/0:13,0:13:18:0,18,165	0/0:26,0:24:63.01:0,63,572	0/0:12,0:12:12:0,12,110	1/1:3,13:15:11.99:121,12,0	1/1:3,13:14:27.08:310,27,0	0/0:13,0:12:21.01:0,21,192	0/0:13,0:11:8.99:0,9,83	0/0:19,0:17:23.48:0,23,219	0/0:19,0:14:23.93:0,24,219	0/0:14,0:6:12.01:0,12,110	0/0:16,0:12:21:0,21,188	0/0:20,0:18:29.69:0,30,273	0/0:9,0:6:2.77:0,3,27	1/1:1,12:13:27.04:296,27,0	1/1:2,10:12:9.03:104,9,0	1/1:5,10:11:9.46:105,9,0	0/0:17,0:16:18:0,18,165	0/0:18,0:16:42.02:0,42,384	0/0:10,0:10:17.97:0,18,157	0/1:5,0:4:0:0,0,0
chr10	51003802	.	TTTTC	T	6342.20	PASS	AC=30;AF=0.556;AN=54;BaseQRankSum=10.791;DP=394;FS=1.168;HRun=0;HaplotypeScore=95.0826;InbreedingCoeff=0.9240;MQ=50.20;MQ0=22;MQRankSum=-6.223;QD=31.87;ReadPosRankSum=-0.163;VQSLOD=4.4467;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,14:18:39.05:567,39,0	1/1:1,7:8:15.05:249,15,0	0/0:19,0:7:8.51:0,9,93	0/0:17,0:7:3.01:0,3,49	0/0:29,0:29:51.18:0,51,1228	1/1:8,21:27:59.95:928,60,0	1/1:7,14:19:48.07:708,48,0	1/1:9,2:11:14.90:187,15,0	0/0:15,0:15:24.08:0,24,573	0/0:17,0:17:39.10:0,39,905	0/0:26,0:25:39.13:0,39,932	1/1:4,7:10:27.01:374,27,0	1/1:3,8:10:24.08:392,24,0	0/0:9,0:9:15.05:0,15,352	1/1:2,13:15:35.91:599,36,0	1/1:0,8:8:18.06:299,18,0	0/0:15,0:12:18.06:0,18,437	0/0:11,0:7:11.94:0,12,186	1/1:3,6:9:15.05:250,15,0	1/1:4,12:16:24:339,24,0	./.	1/1:1,7:8:21.03:319,21,0	1/1:2,13:15:36.08:562,36,0	1/1:1,3:3:9.03:150,9,0	0/0:18,0:18:27.04:0,27,597	0/0:13,0:13:33.07:0,33,757	1/1:0,13:13:27.05:419,27,0	0/0:5,0:4:6.02:0,6,147
chr10	51003825	.	G	GT	1640.63	PASS	AB=0.923;AC=24;AF=0.429;AN=56;BaseQRankSum=7.169;DP=455;FS=10.112;HRun=11;HaplotypeScore=105.5722;InbreedingCoeff=0.3644;MQ=52.46;MQ0=30;MQRankSum=-5.878;QD=6.01;ReadPosRankSum=-0.504;VQSLOD=1.2601;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:12,7:17:5.68:178,0,6	0/0:10,0:9:20.36:0,20,118	1/1:32,0:8:0.90:6,1,0	0/1:21,0:8:8.92:9,0,34	0/0:27,1:28:8.40:0,8,248	1/1:12,9:26:44.56:377,45,0	1/1:7,14:22:30.48:354,30,0	0/0:9,0:9:18.23:0,18,84	0/1:12,1:13:6.56:7,0,139	0/0:15,0:15:29.33:0,29,215	0/0:23,1:26:31.75:0,32,238	1/1:7,6:11:10.46:157,10,0	1/1:9,8:16:29.82:259,30,0	0/0:11,0:11:23.91:0,24,186	0/1:14,1:15:54.58:55,0,84	0/1:14,0:13:5.36:5,0,40	0/0:23,0:20:44.71:0,45,340	0/1:7,1:8:16.44:16,0,62	0/1:11,1:11:10.64:11,0,62	0/1:20,0:20:37.27:37,0,91	0/0:3,0:1:2.60:0,3,10	1/1:7,3:8:9.02:91,9,0	1/1:11,8:19:27.12:221,27,0	1/1:2,1:4:5.85:45,6,0	0/0:18,0:19:28.14:0,28,207	0/0:15,0:15:35.77:0,36,271	0/0:18,0:18:25.42:0,25,137	0/0:4,0:3:5.98:0,6,46
chr10	51004019	.	AC	A	4516.35	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=6.476;DP=620;FS=1.118;HRun=7;HaplotypeScore=70.6072;InbreedingCoeff=0.9822;MQ=78.91;MQ0=0;MQRankSum=-1.495;QD=26.26;ReadPosRankSum=-0.684;VQSLOD=5.1498;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:87.26:0,87,1079	1/1:2,5:7:15.03:153,15,0	0/0:18,0:19:45.06:0,45,516	0/0:19,0:19:45:0,45,483	0/0:24,0:24:66.18:0,66,792	0/0:29,0:48:99:0,126,1178	0/0:22,0:45:99:0,100,864	1/1:4,27:31:81.18:826,81,0	0/0:26,0:26:78.23:0,78,957	0/0:19,0:19:57.17:0,57,698	0/0:18,0:18:54.17:0,54,679	0/0:17,0:17:45.14:0,45,566	0/0:21,0:21:57.18:0,57,716	0/0:13,0:13:39.12:0,39,491	1/1:0,19:19:57.13:581,57,0	1/1:1,21:22:54.12:550,54,0	0/0:25,0:25:63.18:0,63,776	0/0:21,0:21:57.18:0,57,717	1/1:3,17:20:51.07:509,51,0	1/1:2,22:24:63.14:643,63,0	1/1:1,14:15:36.08:367,36,0	0/0:11,0:10:30.10:0,30,377	0/0:15,1:16:8.92:0,9,422	0/0:24,0:25:72.05:0,72,868	0/0:18,0:18:51.16:0,51,641	0/0:22,0:22:60.18:0,60,740	1/1:3,31:33:87.19:887,87,0	0/0:5,0:5:12.04:0,12,151
chr10	51004113	.	AACTAGGCTC	A	2672.53	PASS	AB=0.766;AC=2;AF=0.036;AN=56;BaseQRankSum=5.827;DP=647;FS=9.350;HRun=0;HaplotypeScore=211.0055;InbreedingCoeff=-0.0373;MQ=85.89;MQ0=0;MQRankSum=-7.179;QD=30.72;ReadPosRankSum=-0.520;VQSLOD=1.8692;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:78.27:0,78,3809	0/0:8,0:8:24.08:0,24,1080	0/0:23,0:23:69.24:0,69,2804	0/0:24,0:24:51.52:0,52,2686	0/0:33,0:33:96.33:0,96,4705	0/1:25,22:46:99:1923,0,3213	0/1:32,7:40:99:838,0,3551	0/0:31,0:31:90.31:0,90,3887	0/0:22,0:22:66.23:0,66,3276	0/0:27,0:27:81.28:0,81,4034	0/0:23,0:23:69.24:0,69,3410	0/0:17,0:17:51.18:0,51,2550	0/0:19,0:19:54.19:0,54,2660	0/0:21,0:21:63.22:0,63,3111	0/0:21,0:21:63.22:0,63,3099	0/0:26,0:25:66.23:0,66,3232	0/0:12,0:12:36.12:0,36,1756	0/0:14,0:14:42.14:0,42,2006	0/0:23,0:23:69.22:0,69,3001	0/0:22,0:22:57.15:0,57,2641	0/0:20,0:20:60.15:0,60,2652	0/0:10,0:10:24.08:0,24,1168	0/0:20,0:20:57.17:0,57,2664	0/0:22,0:22:60.20:0,60,2644	0/0:17,0:17:48.16:0,48,2341	0/0:34,0:34:99:0,102,4826	0/0:35,0:35:99:0,102,5131	0/0:7,0:7:21.07:0,21,1003
chr10	51004155	.	A	AATC	25096.67	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=-13.808;DP=655;FS=0.000;HRun=0;HaplotypeScore=90.8349;InbreedingCoeff=0.9953;MQ=86.40;MQ0=0;MQRankSum=-8.739;QD=61.97;ReadPosRankSum=1.887;VQSLOD=6.6517;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,30:30:84.29:1896,84,0	1/1:0,8:8:24.08:565,24,0	0/0:21,0:21:57.06:0,57,975	0/0:32,0:32:90.19:0,90,1379	0/0:38,0:38:99:0,108,1878	1/1:0,49:48:99:3187,135,0	1/1:2,35:38:99:2429,105,0	1/1:5,24:31:93.28:2047,93,0	0/0:22,0:22:66.23:0,66,1164	0/0:24,0:24:72.23:0,72,1187	0/0:23,0:23:66.22:0,66,1133	1/1:2,18:21:57.20:1324,57,0	1/1:0,19:19:48.16:1134,48,0	0/0:17,0:17:51.13:0,51,810	1/1:0,21:22:57.20:1347,57,0	1/1:1,29:30:75.26:1765,75,0	0/0:10,0:10:30.10:0,30,529	0/0:17,0:17:51.13:0,51,860	1/1:2,22:25:69.24:1540,69,0	1/1:2,22:24:63.22:1470,63,0	1/1:4,19:24:57.20:1306,57,0	1/1:2,10:13:36.12:826,36,0	1/1:2,14:15:36.12:811,36,0	1/1:0,18:18:44.68:1045,45,0	0/0:12,0:12:36.12:0,36,635	0/0:30,0:30:84.27:0,84,1432	1/1:1,33:36:99:2403,102,0	0/0:4,0:4:12.04:0,12,212
chr10	51004591	.	T	TA	7810.05	PASS	AB=0.950;AC=53;AF=0.946;AN=56;BaseQRankSum=0.569;DP=749;FS=7.582;HRun=1;HaplotypeScore=225.7608;InbreedingCoeff=0.4788;MQ=76.18;MQ0=0;MQRankSum=3.718;QD=10.71;ReadPosRankSum=5.224;VQSLOD=2.9987;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:41,0:41:96.46:451,96,0	1/1:9,0:9:18.98:89,19,0	0/1:18,0:19:24.13:24,0,285	0/0:19,1:20:4.25:0,4,312	1/1:31,0:31:58.08:279,58,0	1/1:60,0:60:99:705,132,0	1/1:27,0:27:47.12:260,47,0	1/1:41,1:42:72.22:492,72,0	1/1:28,0:28:49.99:260,50,0	1/1:28,0:28:65.89:401,66,0	1/1:11,0:11:7.77:58,8,0	1/1:21,2:23:45.11:279,45,0	1/1:25,0:25:48.62:273,49,0	1/1:24,0:24:49.64:298,50,0	1/1:30,0:30:68.09:378,68,0	1/1:24,0:24:55.43:279,55,0	1/1:22,0:22:48.58:309,49,0	1/1:20,0:20:35.57:150,36,0	1/1:25,0:25:48.50:295,49,0	1/1:30,0:30:60.85:293,61,0	1/1:33,0:33:78.40:364,78,0	1/1:23,0:23:48.82:252,49,0	1/1:19,0:19:30.06:170,30,0	1/1:33,0:33:64.57:307,65,0	1/1:22,0:22:47.12:243,47,0	1/1:34,0:34:68.40:431,68,0	1/1:34,0:34:69.43:340,69,0	1/1:12,0:12:26.55:131,27,0
chr10	51005632	.	ATTCTTTTCTTTT	A	7081.83	PASS	AB=0.980;AC=30;AF=0.536;AN=56;BaseQRankSum=11.495;DP=553;FS=11.143;HRun=0;HaplotypeScore=178.3258;InbreedingCoeff=0.7910;MQ=75.23;MQ0=2;MQRankSum=-7.257;QD=24.42;ReadPosRankSum=-0.737;VQSLOD=3.4351;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:29:3.03:142,3,0	1/1:2,3:5:12.04:427,12,0	0/0:21,0:12:8.09:0,8,85	0/0:27,0:18:26.60:0,27,567	0/0:26,0:26:69.65:0,70,2725	0/1:41,0:41:99:252,0,2706	0/1:23,1:24:99:136,0,1299	1/1:6,16:22:46.89:731,47,0	0/0:11,0:11:24.05:0,24,941	0/0:25,0:25:69.05:0,69,2329	0/0:30,0:30:78.18:0,78,3183	1/1:17,1:19:36.12:570,36,0	1/1:18,1:19:41.20:479,41,0	0/0:17,0:17:45.14:0,45,1890	1/1:4,17:21:21.07:734,21,0	1/1:4,12:16:23.67:846,24,0	0/0:32,0:31:86.80:0,87,4224	0/0:15,0:15:45.14:0,45,1849	1/1:1,10:11:33.05:663,33,0	1/1:3,17:20:48.05:945,48,0	1/1:4,0:3:9.02:118,9,0	1/1:12,0:12:17.90:164,18,0	1/1:13,1:14:10.81:329,11,0	1/1:18,0:18:9:137,9,0	0/0:21,0:21:51.12:0,51,2351	0/0:18,0:18:50.95:0,51,2354	1/1:5,10:15:12.04:409,12,0	0/0:20,0:20:60.19:0,60,2693
chr10	51005635	.	CTTTTCTTTTTTCT	C	5586.44	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=11.946;DP=545;FS=8.383;HRun=0;HaplotypeScore=188.5529;InbreedingCoeff=0.7188;MQ=71.78;MQ0=3;MQRankSum=-6.658;QD=19.74;ReadPosRankSum=0.838;VQSLOD=3.1992;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:32,0:31:29.04:72,0,29	1/1:3,1:4:12.04:367,12,0	0/0:17,0:8:8.24:0,8,107	0/0:26,0:17:32.45:0,32,645	0/0:25,0:25:69.66:0,70,2982	0/1:41,0:41:99:162,0,2927	0/1:24,0:24:88.88:89,0,1424	1/1:21,0:21:47.28:617,47,0	0/0:11,0:11:27.54:0,28,1134	0/0:25,0:25:69.06:0,69,2544	0/0:33,0:33:82.56:0,83,3571	1/1:18,0:18:3.82:378,4,0	1/1:16,0:16:11.92:275,12,0	0/0:17,0:17:48.15:0,48,2238	1/1:18,2:21:21.07:673,21,0	1/1:15,0:15:23.68:648,24,0	0/0:31,0:31:87.21:0,87,4600	0/0:16,0:16:48.15:0,48,2219	1/1:11,0:11:33.02:538,33,0	1/1:18,1:19:47.76:798,48,0	1/1:4,0:3:9.02:118,9,0	1/1:12,0:12:16.26:132,16,0	1/1:12,1:13:10.94:293,11,0	1/1:18,0:18:9:109,9,0	0/0:22,0:22:54.14:0,54,2732	0/0:19,0:19:53.96:0,54,2730	1/1:14,0:14:12.04:316,12,0	0/0:20,0:20:60.19:0,60,2945
chr10	51005636	.	TTTTCTTTTTTC	T	7208.22	PASS	AB=0.977;AC=30;AF=0.536;AN=56;BaseQRankSum=10.875;DP=546;FS=10.867;HRun=0;HaplotypeScore=165.3013;InbreedingCoeff=0.7987;MQ=70.80;MQ0=4;MQRankSum=-7.236;QD=25.47;ReadPosRankSum=-0.488;VQSLOD=3.2942;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:33,0:32:16.21:237,16,0	1/1:4,0:4:12.04:368,12,0	0/0:17,0:8:2.82:0,3,61	0/0:25,0:16:28.46:0,28,502	0/0:24,0:24:69.63:0,70,2474	0/1:39,2:41:99:333,0,2490	0/1:24,0:24:99:148,0,1184	1/1:20,1:21:47.29:697,47,0	0/0:12,0:12:29.69:0,30,1074	0/0:28,0:27:75.04:0,75,2269	0/0:33,0:33:81.12:0,81,2971	1/1:16,2:18:43.31:725,43,0	1/1:16,0:16:44.94:647,45,0	0/0:17,0:17:48.14:0,48,1858	1/1:21,0:21:21.07:644,21,0	1/1:13,1:14:23.66:746,24,0	0/0:31,0:31:87.21:0,87,3882	0/0:16,0:16:48.15:0,48,1836	1/1:10,1:11:33.05:591,33,0	1/1:18,1:19:48.02:874,48,0	1/1:4,0:3:9.02:118,9,0	1/1:12,0:12:18.82:198,19,0	1/1:13,0:13:11.23:334,11,0	1/1:18,0:18:9:165,9,0	0/0:22,0:22:54.12:0,54,2310	0/0:18,0:18:53.96:0,54,2298	1/1:13,1:14:12.04:380,12,0	0/0:20,0:20:60.19:0,60,2490
chr10	51005637	.	TTTCTTTTTTC	T	7458.92	PASS	AB=0.906;AC=31;AF=0.554;AN=56;BaseQRankSum=9.738;DP=543;FS=11.697;HRun=0;HaplotypeScore=154.9004;InbreedingCoeff=0.7562;MQ=70.01;MQ0=4;MQRankSum=-6.673;QD=25.11;ReadPosRankSum=-0.803;VQSLOD=3.6847;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:31,1:31:20.87:331,21,0	1/1:4,0:4:12.04:345,12,0	0/1:17,0:8:11.11:11,0,39	0/0:24,0:15:19.03:0,19,429	0/0:24,0:24:68.69:0,69,2222	0/1:39,1:40:99:393,0,2279	0/1:15,8:23:99:185,0,1074	1/1:21,0:21:47.45:686,47,0	0/0:12,0:12:28.64:0,29,978	0/0:27,0:26:74.87:0,75,2047	0/0:33,0:33:79.73:0,80,2709	1/1:16,2:18:44.57:825,45,0	1/1:14,2:16:45.12:721,45,0	0/0:18,0:18:51.15:0,51,1760	1/1:20,0:20:21.07:604,21,0	1/1:14,0:14:23.79:688,24,0	0/0:32,0:32:90.22:0,90,3621	0/0:16,0:16:48.15:0,48,1658	1/1:11,0:11:33.05:569,33,0	1/1:19,0:19:47.92:823,48,0	1/1:4,0:3:9.02:118,9,0	1/1:2,10:12:20.91:232,21,0	1/1:2,11:13:11.48:371,11,0	1/1:1,18:19:8.64:213,9,0	0/0:22,0:22:54.11:0,54,2105	0/0:18,0:18:53.96:0,54,2096	1/1:14,0:14:12.04:346,12,0	0/0:20,0:20:60.19:0,60,2271
chr10	51005638	.	TTCTTTTTTC	T	7264.04	PASS	AB=0.917;AC=31;AF=0.554;AN=56;BaseQRankSum=9.452;DP=532;FS=9.676;HRun=0;HaplotypeScore=144.0006;InbreedingCoeff=0.7553;MQ=68.44;MQ0=4;MQRankSum=-7.181;QD=25.40;ReadPosRankSum=-1.092;VQSLOD=3.4304;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,25:30:21.04:421,21,0	1/1:4,0:4:12.04:322,12,0	0/1:15,0:6:12.76:13,0,28	0/0:24,0:15:19.98:0,20,373	0/0:24,0:24:65.28:0,65,1985	0/1:26,13:39:99:401,0,2068	0/1:23,0:23:99:164,0,966	1/1:18,0:18:47.20:675,47,0	0/0:13,0:13:30.32:0,30,888	0/0:27,0:26:69.21:0,69,1822	0/0:31,0:31:79.62:0,80,2455	1/1:17,1:18:45.72:773,46,0	1/1:16,0:16:45.12:751,45,0	0/0:19,0:19:54.15:0,54,1613	1/1:20,0:20:21.07:564,21,0	1/1:13,0:13:23.92:643,24,0	0/0:32,0:32:90.22:0,90,3277	0/0:16,0:16:48.14:0,48,1491	1/1:11,0:11:33.05:546,33,0	1/1:19,0:19:47.54:783,48,0	1/1:4,0:3:9.02:118,9,0	1/1:11,1:12:20.91:255,21,0	1/1:13,0:13:11.42:329,11,0	1/1:19,0:19:8.89:182,9,0	0/0:22,0:22:54.09:0,54,1901	0/0:18,0:18:53.96:0,54,1899	1/1:11,0:11:12.04:323,12,0	0/0:20,0:20:60.19:0,60,2039
chr10	51005639	.	TCTTTTTTC	T	6874.48	PASS	AB=0.983;AC=31;AF=0.554;AN=56;BaseQRankSum=9.674;DP=526;FS=8.643;HRun=0;HaplotypeScore=135.9203;InbreedingCoeff=0.7545;MQ=68.49;MQ0=4;MQRankSum=-7.048;QD=24.29;ReadPosRankSum=-1.382;VQSLOD=3.8789;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:28,2:29:21.02:365,21,0	1/1:4,0:4:12.04:300,12,0	0/1:15,0:6:14.27:14,0,17	0/0:24,0:15:17.26:0,17,321	0/0:24,0:24:64.20:0,64,1784	0/1:36,2:38:99:356,0,1866	0/1:23,0:23:99:153,0,864	1/1:17,0:17:47.36:664,47,0	0/0:12,0:12:22.64:0,23,780	0/0:27,0:26:68.96:0,69,1633	0/0:30,0:30:79.66:0,80,2229	1/1:18,0:18:46.29:749,46,0	1/1:16,0:16:45.12:741,45,0	0/0:18,0:18:54.18:0,54,1449	1/1:20,0:20:21.07:526,21,0	1/1:13,0:13:23.91:599,24,0	0/0:32,0:33:93.02:0,93,2991	0/0:16,0:16:48.14:0,48,1323	1/1:11,0:11:33.05:524,33,0	1/1:19,0:19:46.60:745,47,0	1/1:4,0:3:9.02:119,9,0	1/1:11,1:12:20.91:241,21,0	1/1:13,0:13:11.29:307,11,0	1/1:19,0:19:8.97:171,9,0	0/0:20,0:20:54.17:0,54,1701	0/0:18,0:18:53.96:0,54,1719	1/1:11,0:11:12.04:301,12,0	0/0:21,0:21:63.03:0,63,1843
chr10	51005912	.	CA	C	4554.80	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=13.660;DP=571;FS=0.000;HRun=2;HaplotypeScore=63.1316;InbreedingCoeff=0.9689;MQ=61.83;MQ0=0;MQRankSum=0.441;QD=35.04;ReadPosRankSum=3.834;VQSLOD=5.0875;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,47:49:99:1714,132,0	0/0:2,0:2:6.02:0,6,90	0/0:16,0:14:42.13:0,42,573	0/0:16,0:12:33.98:0,34,438	0/0:13,0:13:39.12:0,39,564	0/0:46,0:46:99:0,135,1975	0/0:34,0:34:99:0,102,1508	0/0:34,0:34:96.25:0,96,1342	0/0:16,0:16:48.15:0,48,701	0/0:19,0:19:57.19:0,57,850	0/0:11,0:11:30.10:0,30,449	1/1:0,29:29:78.25:1011,78,0	1/1:0,17:17:48.16:623,48,0	0/0:17,0:17:51.15:0,51,721	0/0:21,0:21:63.20:0,63,926	0/0:28,0:28:84.27:0,84,1239	0/0:23,0:23:69.23:0,69,1034	0/0:24,0:23:66.18:0,66,964	0/0:15,0:15:39.13:0,39,582	0/0:10,0:10:27.08:0,27,386	0/0:32,0:32:96.29:0,96,1398	1/1:0,6:6:12.04:156,12,0	1/1:0,6:6:15.05:195,15,0	1/1:0,23:23:66.21:857,66,0	0/0:9,0:9:27.09:0,27,405	0/0:25,0:25:75.25:0,75,1105	0/0:18,0:18:54.17:0,54,790	0/0:12,0:12:36.12:0,36,539
chr10	51006168	.	A	ATTAT	1598.52	PASS	AC=16;AF=0.320;AN=50;BaseQRankSum=-4.543;DP=315;FS=0.780;HRun=0;HaplotypeScore=47.4907;InbreedingCoeff=0.7197;MQ=63.56;MQ0=1;MQRankSum=0.255;QD=15.22;ReadPosRankSum=-2.237;VQSLOD=2.5091;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:27.09:0,27,429	1/1:2,0:3:3.01:52,3,0	./.	./.	0/0:14,0:14:15.04:0,15,215	0/0:36,0:36:66.21:0,66,1007	0/0:9,0:9:6.02:0,6,95	1/1:38,12:50:39.09:667,39,0	0/0:4,0:4:9.03:0,9,143	0/0:10,0:10:21.07:0,21,315	0/0:9,0:9:12.04:0,12,191	0/0:6,0:6:9.03:0,9,126	0/0:4,0:4:9.02:0,9,117	0/0:5,0:5:3.01:0,3,48	1/1:4,0:7:9.03:155,9,0	1/1:5,0:7:6.02:105,6,0	0/0:21,0:21:10.93:0,11,395	0/0:15,0:15:18.06:0,18,275	1/1:5,6:10:12.04:287,12,0	1/1:7,3:10:9.03:215,9,0	1/1:1,1:2:3.01:72,3,0	0/0:5,0:6:3:0,3,28	./.	0/0:2,0:2:6.02:0,6,95	0/0:6,0:6:6.02:0,6,95	0/0:15,0:15:12.04:0,12,179	1/1:9,5:14:9.03:215,9,0	0/0:17,0:17:39.13:0,39,608
chr10	51006415	.	A	AT	504.99	PASS	AB=0.761;AC=2;AF=0.036;AN=56;BaseQRankSum=9.209;DP=679;FS=13.103;HRun=0;HaplotypeScore=78.5232;InbreedingCoeff=-0.0372;MQ=82.47;MQ0=0;MQRankSum=-9.137;QD=5.74;ReadPosRankSum=1.783;VQSLOD=1.8827;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,102,1354	0/0:8,0:8:21.07:0,21,291	0/0:24,0:24:66.20:0,66,895	0/0:17,0:17:46.93:0,47,599	0/0:27,0:27:81.26:0,81,1115	0/1:34,25:60:99:496,0,1186	0/1:22,6:28:97.78:98,0,783	0/0:33,0:33:89.04:0,89,1265	0/0:30,0:30:87.29:0,87,1217	0/0:20,0:20:54.17:0,54,734	0/0:25,0:25:72.24:0,72,1004	0/0:26,0:26:78.24:0,78,1058	0/0:31,0:31:93.31:0,93,1301	0/0:21,0:21:63.21:0,63,881	0/0:28,0:28:78.25:0,78,1072	0/0:31,0:31:93.30:0,93,1281	0/0:18,0:18:54.15:0,54,732	0/0:20,0:20:60.20:0,60,839	0/0:22,0:22:60.20:0,60,839	0/0:19,0:19:57.18:0,57,782	0/0:28,0:28:81.25:0,81,1099	0/0:14,0:14:42.14:0,42,584	0/0:11,0:11:33.11:0,33,462	0/0:21,0:21:60.19:0,60,823	0/0:10,0:10:30.09:0,30,406	0/0:20,0:20:60.20:0,60,839	0/0:40,0:40:99:0,120,1655	0/0:13,0:13:39.13:0,39,545
chr10	51006416	.	A	AACCTGGGT	4403.98	PASS	AB=0.798;AC=2;AF=0.036;AN=56;BaseQRankSum=9.869;DP=691;FS=8.940;HRun=0;HaplotypeScore=173.4590;InbreedingCoeff=-0.0371;MQ=81.90;MQ0=0;MQRankSum=-10.594;QD=44.48;ReadPosRankSum=0.124;VQSLOD=4.0780;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,102,2976	0/0:8,0:8:24.05:0,24,595	0/0:24,0:24:72.22:0,72,1892	0/0:18,0:18:50.74:0,51,1305	0/0:27,0:27:81.28:0,81,2396	0/1:44,22:66:99:3306,0,2773	0/1:27,6:33:99:1098,0,1752	0/0:31,0:31:92.33:0,92,2606	0/0:33,0:33:87.28:0,87,2566	0/0:19,0:19:54.17:0,54,1474	0/0:25,0:25:75.23:0,75,2100	0/0:26,0:26:78.27:0,78,2288	0/0:31,0:31:93.28:0,93,2673	0/0:21,0:21:63.20:0,63,1841	0/0:28,0:28:84.25:0,84,2290	0/0:32,0:32:93.29:0,93,2603	0/0:18,0:18:51.15:0,51,1435	0/0:20,0:20:60.21:0,60,1817	0/0:21,0:21:63.17:0,63,1637	0/0:19,0:19:57.20:0,57,1711	0/0:28,0:28:81.28:0,81,2371	0/0:14,0:14:42.13:0,42,1158	0/0:11,0:11:33.11:0,33,998	0/0:21,0:21:60.17:0,60,1642	0/0:10,0:10:30.10:0,30,896	0/0:20,0:20:60.21:0,60,1800	0/0:40,0:40:99:0,120,3308	0/0:13,0:13:39.13:0,39,1181
chr10	51007281	.	CG	C	8341.76	PASS	AB=0.878;AC=54;AF=0.964;AN=56;BaseQRankSum=3.018;DP=663;FS=11.855;HRun=1;HaplotypeScore=340.9929;InbreedingCoeff=-0.0371;MQ=70.55;MQ0=0;MQRankSum=-7.490;QD=12.58;ReadPosRankSum=3.077;VQSLOD=2.3633;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,25:29:67.51:323,68,0	1/1:2,8:10:24.63:110,25,0	0/1:15,1:17:31.51:32,0,56	0/1:21,3:25:50.83:149,0,51	1/1:3,12:15:30.07:154,30,0	1/1:1,38:39:99:510,107,0	1/1:8,47:56:99:732,150,0	1/1:0,25:25:72.70:413,73,0	1/1:5,31:36:96.15:465,96,0	1/1:3,28:31:81.33:556,81,0	1/1:1,14:15:36.56:154,37,0	1/1:4,23:27:73.63:376,74,0	1/1:2,38:40:99:505,106,0	1/1:6,20:26:53.13:244,53,0	1/1:2,30:32:85.86:423,86,0	1/1:3,26:29:79.41:403,79,0	1/1:1,14:15:40.24:189,40,0	1/1:1,5:7:20.18:120,20,0	1/1:0,10:10:24.91:135,25,0	1/1:2,21:23:62.48:334,62,0	1/1:2,16:18:35.31:253,35,0	1/1:3,18:21:47.44:275,47,0	1/1:1,18:19:46.60:232,47,0	1/1:2,12:14:22.60:84,23,0	1/1:1,18:19:51.65:259,52,0	1/1:2,23:25:66.70:357,67,0	1/1:1,33:34:91.51:464,92,0	1/1:0,6:6:17.20:90,17,0
chr10	51007283	.	CT	C	9562.78	PASS	AB=0.972;AC=54;AF=0.964;AN=56;BaseQRankSum=6.634;DP=668;FS=32.031;HRun=1;HaplotypeScore=333.9194;InbreedingCoeff=-0.0418;MQ=70.53;MQ0=0;MQRankSum=-2.628;QD=14.32;ReadPosRankSum=7.186;VQSLOD=1.8768;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:28,1:29:61.45:424,61,0	1/1:8,2:10:18.76:137,19,0	0/1:16,1:17:25.02:78,0,25	0/1:25,0:25:40.57:150,0,41	1/1:14,0:14:13.61:119,14,0	1/1:38,0:38:84.09:543,84,0	1/1:55,2:57:99:858,147,0	1/1:26,0:26:70.81:392,71,0	1/1:37,0:37:86.23:545,86,0	1/1:32,0:32:89.63:519,90,0	1/1:17,0:17:46.95:319,47,0	1/1:27,1:28:71.84:479,72,0	1/1:39,0:39:99:665,113,0	1/1:25,1:26:63.43:376,63,0	1/1:33,0:33:88.48:526,88,0	1/1:29,0:29:83.39:469,83,0	1/1:15,0:15:21.33:179,21,0	1/1:7,0:7:12.01:68,12,0	1/1:11,0:11:22.36:146,22,0	1/1:23,0:23:53.15:353,53,0	1/1:16,0:16:9.84:109,10,0	1/1:22,0:22:47.84:322,48,0	1/1:20,0:20:45.96:300,46,0	1/1:14,0:14:25.95:142,26,0	1/1:20,0:20:52.85:336,53,0	1/1:23,1:24:69.21:391,69,0	1/1:33,0:33:94.25:536,94,0	1/1:6,0:6:15.28:82,15,0
chr10	51007284	.	T	TC	9817.47	PASS	AB=1.000;AC=54;AF=0.964;AN=56;BaseQRankSum=2.132;DP=699;FS=9.464;HRun=1;HaplotypeScore=344.7637;InbreedingCoeff=0.3704;MQ=70.74;MQ0=0;MQRankSum=-8.485;QD=14.05;ReadPosRankSum=3.093;VQSLOD=3.1315;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,25:33:79.36:417,79,0	1/1:2,8:10:25.78:147,26,0	0/1:20,0:20:0.11:0,0,134	0/1:24,0:24:17.90:18,0,228	1/1:3,12:15:30.25:161,30,0	1/1:3,38:41:99:577,111,0	1/1:13,47:60:99:1010,170,0	1/1:2,25:27:76.94:524,77,0	1/1:6,31:37:99:640,105,0	1/1:5,28:33:76.86:657,77,0	1/1:2,15:17:42.80:211,43,0	1/1:6,23:29:77:428,77,0	1/1:3,38:41:99:549,109,0	1/1:7,20:27:50.85:407,51,0	1/1:5,30:35:95.64:502,96,0	1/1:5,26:31:89.13:541,89,0	1/1:1,14:15:42.43:222,42,0	1/1:2,5:7:17.72:124,18,0	1/1:1,10:11:28.95:187,29,0	1/1:3,21:24:64.79:335,65,0	1/1:1,16:17:25.77:135,26,0	1/1:7,18:25:50.85:298,51,0	1/1:3,18:21:50.15:276,50,0	1/1:3,12:15:24.83:127,25,0	1/1:2,18:20:56.50:304,57,0	1/1:1,23:24:67.44:430,67,0	1/1:1,33:34:93.04:480,93,0	1/1:0,6:6:17.63:108,18,0
chr10	51007420	.	AT	A	593.25	PASS	AB=0.804;AC=3;AF=0.054;AN=56;BaseQRankSum=6.286;DP=663;FS=10.149;HRun=9;HaplotypeScore=68.5585;InbreedingCoeff=-0.0601;MQ=76.12;MQ0=0;MQRankSum=0.257;QD=5.82;ReadPosRankSum=-0.440;VQSLOD=0.2476;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:84.24:0,84,959	0/0:9,0:9:21.04:0,21,229	0/0:20,1:21:12.26:0,12,478	0/1:14,0:14:34.07:34,0,104	0/0:25,0:25:72.20:0,72,823	0/1:24,15:39:99:282,0,581	0/1:27,22:49:99:377,0,586	0/0:32,0:32:84.20:0,84,946	0/0:22,0:22:60.15:0,60,679	0/0:24,0:24:69.21:0,69,796	0/0:30,0:30:78.23:0,78,895	0/0:21,1:22:29.69:0,30,587	0/0:25,1:26:41.75:0,42,727	0/0:12,0:12:33.10:0,33,381	0/0:23,0:23:60.17:0,60,683	0/0:32,1:32:53.75:0,54,849	0/0:44,0:45:99:0,113,1344	0/0:15,0:15:42.10:0,42,472	0/0:15,0:15:36.10:0,36,407	0/0:26,0:26:72.21:0,72,830	0/0:19,0:19:42.12:0,42,485	0/0:28,0:28:84.20:0,84,944	0/0:19,0:19:51.15:0,51,589	0/0:13,0:13:36.11:0,36,415	0/0:16,0:16:42.12:0,42,485	0/0:22,0:22:63.19:0,63,726	0/0:29,0:29:78.23:0,78,900	0/0:3,0:3:9.03:0,9,104
chr10	51008022	.	CAGAG	C	4107.80	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=3.385;DP=752;FS=9.327;HRun=0;HaplotypeScore=188.9884;InbreedingCoeff=0.8937;MQ=52.34;MQ0=11;MQRankSum=-5.163;QD=15.74;ReadPosRankSum=-1.774;VQSLOD=2.3285;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:34:27.87:0,28,639	1/1:7,2:10:11.37:229,11,0	1/1:27,0:7:1.82:5,2,0	0/0:37,0:10:5.68:0,6,81	0/0:26,0:28:50.30:0,50,759	0/0:24,0:32:34.75:0,35,513	0/0:30,0:38:42.84:0,43,623	1/1:32,0:30:65.22:580,65,0	1/1:4,17:22:30.09:470,30,0	0/0:34,0:34:62.92:0,63,1056	0/0:30,0:32:41.20:0,41,570	0/0:19,0:19:48.12:0,48,952	0/0:29,0:31:68.93:0,69,1311	0/0:14,0:16:32.57:0,33,507	1/1:16,7:23:41.91:547,42,0	1/1:19,5:25:33.09:482,33,0	0/0:30,0:32:7.62:0,8,989	0/0:20,0:20:48:0,48,845	1/1:16,2:16:26.92:312,27,0	1/1:25,7:32:5.29:389,5,0	1/1:25,3:26:24.02:284,24,0	0/0:26,0:28:29.68:0,30,567	0/0:21,0:20:19.04:0,19,479	0/0:26,0:28:36.12:0,36,497	0/0:19,0:19:21.07:0,21,433	0/0:33,0:34:53.57:0,54,862	1/1:26,8:37:53.41:810,53,0	0/0:3,0:2:3.01:0,3,73
chr10	51008066	.	CAGAG	C	11038.33	PASS	AB=0.768;AC=30;AF=0.536;AN=56;BaseQRankSum=9.059;DP=721;FS=29.956;HRun=0;HaplotypeScore=171.7596;InbreedingCoeff=0.6856;MQ=47.04;MQ0=36;MQRankSum=-3.613;QD=22.71;ReadPosRankSum=0.285;VQSLOD=3.0635;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:7,13:20:31.02:503,0,31	1/1:0,6:6:15.05:259,15,0	0/0:34,0:7:12.02:0,12,228	0/1:76,0:10:2.04:2,0,81	0/0:23,0:22:63.18:0,63,1544	0/1:15,11:22:99:467,0,185	0/1:27,12:36:99:432,0,316	1/1:7,39:36:90.01:1283,90,0	0/0:19,0:19:45.11:0,45,932	0/0:29,0:29:81.22:0,81,1635	0/0:22,0:22:60.10:0,60,1442	1/1:4,16:20:51.13:871,51,0	1/1:6,17:23:48.15:821,48,0	0/0:20,0:20:57.16:0,57,1339	1/1:1,23:24:48.12:749,48,0	1/1:6,15:21:37.68:611,38,0	0/0:35,0:35:85.47:0,85,1923	0/0:22,0:23:56.22:0,56,1550	1/1:1,24:24:68.77:969,69,0	1/1:8,22:29:7.40:765,7,0	1/1:4,20:23:15.03:245,15,0	1/1:5,9:14:26.88:392,27,0	1/1:7,12:18:10.20:454,10,0	1/1:13,23:36:38.95:911,39,0	0/0:7,0:7:5.92:0,6,97	0/0:21,0:20:57.18:0,57,1315	1/1:0,37:37:78.25:1304,78,0	0/0:2,0:2:5.96:0,6,44
chr10	51008122	.	A	AAC	5868.94	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-0.089;DP=779;FS=7.893;HRun=0;HaplotypeScore=151.8593;InbreedingCoeff=0.9725;MQ=55.24;MQ0=23;MQRankSum=1.354;QD=23.48;ReadPosRankSum=0.597;VQSLOD=5.3026;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:9,25:33:63.18:953,63,0	0/0:8,0:8:18.01:0,18,204	0/0:34,0:10:14.82:0,15,141	0/0:41,0:14:8.96:0,9,94	0/0:21,0:21:42.09:0,42,483	1/1:23,11:29:10.96:554,11,0	1/1:25,18:42:52.71:761,53,0	0/0:51,0:48:96.05:0,96,1080	0/0:18,0:18:18.31:0,18,421	0/0:32,0:32:87.23:0,87,1007	0/0:19,0:21:50.78:0,51,544	1/1:10,19:29:57.19:849,57,0	1/1:5,22:28:37.28:723,37,0	0/0:27,0:27:72.15:0,72,842	0/0:23,0:23:35.87:0,36,332	0/0:28,0:28:56.51:0,57,614	0/0:31,0:31:78.19:0,78,929	0/0:16,0:16:36.08:0,36,416	0/0:30,0:29:75.04:0,75,866	0/0:34,0:35:87.02:0,87,989	0/0:20,0:20:23.92:0,24,266	1/1:5,14:18:13.24:437,13,0	1/1:6,18:23:44.82:644,45,0	1/1:12,26:38:63.04:947,63,0	0/0:16,0:16:39.12:0,39,480	0/0:36,0:36:99:0,102,1234	0/0:31,0:31:53.90:0,54,552	0/0:7,0:7:18.01:0,18,192
chr10	51008224	.	GAGACAGAGAC	G	1009.50	PASS	AB=0.968;AC=10;AF=0.179;AN=56;BaseQRankSum=0.683;DP=832;FS=6.331;HRun=0;HaplotypeScore=294.7103;InbreedingCoeff=0.0083;MQ=51.46;MQ0=26;MQRankSum=-4.349;QD=3.30;ReadPosRankSum=-4.469;VQSLOD=1.1336;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:31:38.18:0,38,1546	0/0:11,0:11:21.05:0,21,758	0/0:31,0:10:9.74:0,10,117	0/1:65,0:14:7.85:8,0,28	0/0:31,0:31:78.23:0,78,3009	1/1:9,7:17:37.72:414,38,0	0/1:18,8:26:30.90:355,0,31	0/1:55,0:38:99:150,0,1044	0/0:24,0:24:66.19:0,66,2566	0/0:38,0:38:81.28:0,81,3182	0/0:28,0:27:71.25:0,71,2676	0/0:17,0:17:18.09:0,18,848	0/1:26,0:25:68.59:69,0,1125	0/0:20,0:20:51.13:0,51,1863	0/0:35,0:34:4.03:0,4,1328	0/1:20,0:20:11.62:12,0,642	0/0:34,0:34:91.54:0,92,3451	0/0:26,0:26:46.22:0,46,2185	0/0:34,0:25:38.62:0,39,1866	0/1:26,0:26:99:104,0,1059	0/0:34,0:33:44.28:0,44,1405	0/0:31,0:31:44.89:0,45,1538	0/0:31,0:30:9.09:0,9,1941	0/1:35,0:35:19.13:19,0,828	0/0:21,0:21:45.05:0,45,1884	0/0:44,0:43:99:0,120,4583	0/1:32,0:32:27.78:28,0,1630	0/0:4,0:4:9.03:0,9,370
chr10	51008256	.	GAAAC	G	599.09	PASS	AB=0.912;AC=8;AF=0.143;AN=56;BaseQRankSum=8.996;DP=763;FS=5.998;HRun=0;HaplotypeScore=231.0805;InbreedingCoeff=-0.1872;MQ=49.21;MQ0=19;MQRankSum=-7.805;QD=4.08;ReadPosRankSum=-2.220;VQSLOD=1.8547;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,2:29:47.05:0,47,679	0/1:12,0:12:99:110,0,436	0/0:31,0:8:14.21:0,14,204	0/0:53,0:13:1.36:0,1,254	0/0:37,0:37:99:0,111,2942	0/1:14,0:13:51.10:51,0,55	0/0:24,2:24:11.46:0,11,163	0/0:38,0:27:77.79:0,78,1418	0/0:32,0:32:94.19:0,94,2384	0/0:38,0:38:99:0,114,2942	0/0:29,0:29:78.27:0,78,2147	0/1:13,5:18:48.83:49,0,339	0/1:14,7:21:99:248,0,497	0/0:23,0:23:69.23:0,69,1862	0/1:22,1:23:63.94:64,0,635	0/1:12,1:13:99:116,0,255	0/0:31,0:31:86.85:0,87,2177	0/0:27,0:27:78.20:0,78,1866	0/1:25,1:22:28.69:29,0,1165	0/1:18,1:19:67.03:67,0,634	0/0:27,1:26:42.37:0,42,744	0/0:26,8:34:34.62:0,35,854	0/0:36,0:36:56.73:0,57,1131	0/0:23,2:25:31.66:0,32,480	0/0:24,0:24:72.25:0,72,1892	0/0:43,0:42:99:0,126,3298	0/0:20,1:21:4.88:0,5,925	0/0:4,0:4:12.04:0,12,334
chr10	51008262	.	C	CAG	4523.29	PASS	AB=1.000;AC=22;AF=0.393;AN=56;BaseQRankSum=8.322;DP=775;FS=7.744;HRun=0;HaplotypeScore=213.6752;InbreedingCoeff=0.8390;MQ=49.26;MQ0=17;MQRankSum=-7.380;QD=17.20;ReadPosRankSum=-2.671;VQSLOD=3.5468;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:18.43:0,18,123	1/1:8,6:14:29.66:384,30,0	0/0:32,0:7:6:0,6,64	0/0:52,0:14:17.40:0,17,158	0/0:38,0:38:99:0,99,1228	1/1:7,8:14:14.98:235,15,0	1/1:18,9:27:3.74:142,4,0	1/1:17,21:26:58.32:845,58,0	0/0:31,0:31:78.23:0,78,991	0/0:41,0:41:99:0,108,1324	0/0:31,0:31:53.24:0,53,874	0/1:20,0:20:1.23:1,0,89	0/1:21,0:21:10.72:11,0,77	0/0:24,0:24:69.20:0,69,862	1/1:13,9:21:36.10:569,36,0	1/1:7,4:11:19.42:228,19,0	0/0:39,0:39:96.05:0,96,1138	0/0:27,0:27:63.03:0,63,759	1/1:16,10:22:19.69:688,20,0	1/1:17,5:22:35.97:546,36,0	1/1:13,12:23:24.07:395,24,0	0/0:35,0:35:33.93:0,34,191	0/0:35,0:35:35.20:0,35,216	0/0:23,0:23:14.80:0,15,91	0/0:25,0:25:69.17:0,69,831	0/0:42,0:42:99:0,105,1377	1/1:6,14:20:32.81:480,33,0	0/0:6,0:6:18.01:0,18,186
chr10	51008272	.	GAC	G	1065.34	PASS	AB=0.780;AC=11;AF=0.196;AN=56;BaseQRankSum=10.016;DP=778;FS=2.944;HRun=0;HaplotypeScore=221.3915;InbreedingCoeff=-0.2567;MQ=51.44;MQ0=12;MQRankSum=-7.548;QD=4.48;ReadPosRankSum=-3.239;VQSLOD=2.2816;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,3:30:20.77:0,21,296	0/1:10,5:15:99:122,0,123	0/0:26,0:5:8.61:0,9,77	0/0:54,0:20:18.88:0,19,261	0/0:38,0:38:99:0,114,1947	0/1:15,3:16:26.76:35,0,27	0/0:24,5:26:4.27:0,4,121	0/1:39,2:32:99:136,0,520	0/0:30,0:30:87.21:0,87,1557	0/0:39,0:39:99:0,117,2139	0/0:31,0:30:58.67:0,59,1388	0/1:8,10:18:73.84:74,0,121	0/1:7,9:16:99:225,0,186	0/0:25,0:25:75.23:0,75,1368	0/1:14,8:21:46.75:103,0,47	0/1:7,5:12:50.61:130,0,51	0/0:41,0:41:99:0,115,1870	0/0:27,0:27:66.52:0,67,1153	0/1:26,3:24:99:254,0,256	0/1:9,13:22:57.27:57,0,103	0/1:23,2:24:26.99:27,0,107	0/0:24,11:35:28.62:0,29,478	0/0:33,1:34:35.55:0,36,654	0/0:20,2:22:15.78:0,16,225	0/0:30,0:30:87.09:0,87,1410	0/0:41,0:41:99:0,120,2137	0/1:16,4:20:51.38:51,0,194	0/0:6,0:6:18.05:0,18,293
chr10	51008304	.	GAAAC	G	536.68	PASS	AB=0.981;AC=12;AF=0.214;AN=56;BaseQRankSum=8.056;DP=814;FS=8.019;HRun=0;HaplotypeScore=273.4805;InbreedingCoeff=-0.0880;MQ=55.08;MQ0=10;MQRankSum=-6.896;QD=1.92;ReadPosRankSum=-6.056;VQSLOD=0.0122;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:26:43.71:44,0,74	0/1:12,2:14:13.02:13,0,280	0/0:36,0:12:16.32:0,16,299	0/0:63,0:20:24.31:0,24,364	0/0:35,0:35:99:0,102,2494	0/1:27,0:24:18.19:18,0,650	0/1:35,0:32:3.43:3,0,1034	0/0:57,0:51:99:0,129,3022	0/0:31,0:31:93.28:0,93,2269	0/0:41,0:41:99:0,123,3152	0/0:30,0:28:75.12:0,75,1890	0/1:23,0:22:73.25:73,0,201	0/1:19,0:19:10.61:11,0,366	0/0:29,0:29:87.29:0,87,2270	0/1:29,1:30:99:114,0,453	0/0:17,0:17:8.41:0,8,564	0/0:37,0:37:89.64:0,90,2380	0/0:20,0:20:60.13:0,60,1385	0/0:27,1:23:31.13:0,31,1278	0/1:40,0:40:99:121,0,541	0/0:15,0:14:17.54:0,18,156	0/1:31,0:30:69.52:240,0,70	0/1:20,0:19:1.97:2,0,11	1/1:11,0:12:3.67:40,4,0	0/0:36,0:36:98.55:0,99,2601	0/0:31,0:31:90.30:0,90,2218	0/0:16,0:16:7.20:0,7,503	0/0:11,0:11:12.04:0,12,738
chr10	51008305	.	A	AGAGAGACAGA	5698.92	PASS	AB=1.000;AC=32;AF=0.571;AN=56;BaseQRankSum=10.189;DP=779;FS=0.485;HRun=0;HaplotypeScore=311.3704;InbreedingCoeff=0.6610;MQ=55.93;MQ0=10;MQRankSum=-9.207;QD=12.07;ReadPosRankSum=-7.064;VQSLOD=1.6169;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:25:3.68:137,4,0	1/1:13,0:13:14.88:435,15,0	0/1:39,0:12:15.54:16,0,17	0/1:62,0:20:1.15:1,0,146	0/0:35,0:35:78.19:0,78,1943	1/1:25,0:22:7.46:211,7,0	0/1:35,0:32:78.27:78,0,114	1/1:48,0:43:27.40:422,27,0	0/0:31,0:31:60.17:0,60,1610	0/0:41,0:41:81.27:0,81,2133	0/0:30,0:28:57.04:0,57,1529	1/1:22,0:21:14.75:379,15,0	1/1:18,0:18:17.96:804,18,0	0/0:30,0:30:60.17:0,60,1557	1/1:28,0:27:20.58:519,21,0	1/1:16,0:16:15.28:490,15,0	0/0:37,0:37:72.39:0,72,1821	0/0:21,0:21:51.14:0,51,1266	1/1:25,0:21:27.51:543,28,0	1/1:39,0:39:16.73:536,17,0	1/1:12,0:11:1.35:42,1,0	1/1:23,0:23:22.47:646,22,0	0/0:5,9:16:0.31:0,0,2	1/1:12,0:12:10.70:133,11,0	0/0:34,0:34:57.35:0,57,1459	0/0:31,0:31:60.15:0,60,1497	1/1:16,0:16:15.02:304,15,0	0/1:11,0:11:3.27:3,0,326
chr10	51008310	.	C	CAG	2312.19	PASS	AB=0.976;AC=20;AF=0.357;AN=56;BaseQRankSum=11.518;DP=818;FS=4.639;HRun=0;HaplotypeScore=251.9550;InbreedingCoeff=0.1680;MQ=54.71;MQ0=11;MQRankSum=-9.392;QD=6.59;ReadPosRankSum=-6.813;VQSLOD=1.5585;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:17,10:25:2.47:291,2,0	0/1:12,0:13:40.20:92,0,40	0/0:41,0:12:10.84:0,11,162	0/0:68,0:20:8.82:0,9,59	0/0:32,0:33:72.03:0,72,832	0/1:25,0:24:87.80:108,0,88	0/1:36,0:33:99:128,0,233	0/0:51,0:45:26.51:0,27,922	0/0:31,0:31:75.22:0,75,900	0/0:45,0:45:99:0,102,1179	0/0:28,0:26:42.11:0,42,490	1/1:13,11:23:20.15:409,20,0	1/1:12,9:21:50.60:685,51,0	0/0:29,0:29:69.05:0,69,820	0/1:28,0:27:37.31:37,0,73	0/1:18,0:19:69.23:69,0,134	0/0:35,0:36:60.90:0,61,847	0/0:21,0:21:43.29:0,43,497	0/1:26,0:20:47.19:47,0,303	0/1:41,0:41:18.58:239,0,19	0/1:15,0:14:27.56:93,0,28	0/1:17,8:24:1.49:138,0,1	1/1:16,4:19:8.93:71,9,0	1/1:10,2:12:2.01:6,2,0	0/0:37,0:37:87.26:0,87,1049	0/0:31,0:34:71.85:0,72,785	0/1:16,0:16:76.21:76,0,90	0/0:12,0:12:27.08:0,27,330
chr10	51008320	.	G	GAGAC	1888.51	PASS	AB=0.914;AC=21;AF=0.375;AN=56;BaseQRankSum=13.473;DP=817;FS=13.775;HRun=0;HaplotypeScore=258.6981;InbreedingCoeff=0.1502;MQ=54.09;MQ0=19;MQRankSum=-11.318;QD=4.62;ReadPosRankSum=-0.706;VQSLOD=1.0476;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:25:16.90:138,17,0	0/1:9,3:12:96.57:176,0,97	0/0:41,0:13:22.07:0,22,247	0/0:69,0:17:14.54:0,15,156	0/0:34,0:34:96.20:0,96,1513	0/1:29,0:26:90.88:91,0,188	0/1:41,0:38:72.44:72,0,453	0/1:48,0:41:99:115,0,1577	0/0:29,0:29:78.20:0,78,1430	0/0:39,0:39:99:0,117,2034	0/0:24,0:22:60.59:0,61,932	1/1:23,0:22:23.98:172,24,0	1/1:20,0:20:16.36:158,16,0	0/0:28,0:28:75.23:0,75,1332	0/1:29,1:29:84.67:89,0,85	0/1:18,2:20:99:121,0,241	0/0:33,0:33:73.75:0,74,1409	0/0:18,0:18:50.94:0,51,859	0/1:24,2:20:99:103,0,524	0/1:34,7:41:35.70:445,0,36	0/1:15,3:14:51.23:191,0,51	1/1:25,0:24:2.50:30,2,0	1/1:19,0:18:5.33:30,5,0	0/1:8,0:10:0:0,0,0	0/0:37,0:37:99:0,111,1831	0/0:40,0:39:99:0,99,1537	0/1:18,2:20:99:134,0,146	0/0:14,0:14:17.06:0,17,558
chr10	51008322	.	G	GGC	2985.18	PASS	AB=0.924;AC=22;AF=0.393;AN=56;BaseQRankSum=14.572;DP=821;FS=4.280;HRun=0;HaplotypeScore=236.5751;InbreedingCoeff=0.1924;MQ=52.07;MQ0=21;MQRankSum=-12.697;QD=7.09;ReadPosRankSum=-0.747;VQSLOD=2.9049;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:25,2:25:16.38:105,16,0	0/1:12,0:12:94.14:94,0,105	0/0:38,0:12:20.20:0,20,257	0/0:62,0:12:17.38:0,17,197	0/0:33,0:33:96.29:0,96,1507	0/1:18,13:29:99:528,0,195	0/1:18,19:34:99:521,0,422	0/1:51,0:40:66.98:67,0,1388	0/0:30,0:30:81.25:0,81,1282	0/0:43,0:43:99:0,123,1957	0/0:23,0:22:60.20:0,60,963	1/1:25,0:24:19.89:245,20,0	1/1:17,3:20:49.42:368,49,0	0/0:28,0:28:81.23:0,81,1261	0/1:28,0:28:66.12:94,0,66	0/1:22,0:22:99:238,0,212	0/0:32,0:32:87.98:0,88,1339	0/0:18,0:18:51.15:0,51,794	0/1:28,0:22:99:138,0,483	0/1:40,0:42:43.53:305,0,44	0/1:22,1:19:29.74:168,0,30	1/1:23,2:24:12.66:122,13,0	1/1:15,2:16:6.78:41,7,0	1/1:10,0:10:1.76:6,2,0	0/0:37,0:37:99:0,111,1781	0/0:39,0:38:99:0,111,1671	0/1:21,0:21:99:132,0,135	0/0:14,0:14:39.13:0,39,611
chr10	51008327	.	G	GCAGAGA	8760.84	PASS	AB=0.923;AC=29;AF=0.518;AN=56;BaseQRankSum=8.940;DP=795;FS=2.942;HRun=0;HaplotypeScore=250.7451;InbreedingCoeff=0.7601;MQ=53.69;MQ0=20;MQRankSum=-11.762;QD=21.32;ReadPosRankSum=-1.420;VQSLOD=4.1795;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:22:10.88:330,11,0	1/1:6,5:12:14.63:170,15,0	0/0:34,0:11:3.01:0,3,42	0/0:56,0:14:8.96:0,9,127	0/0:34,0:34:60.43:0,60,1094	0/1:33,0:30:99:297,0,121	0/1:40,0:37:99:237,0,173	1/1:46,0:35:30.09:502,30,0	0/0:28,0:28:37.18:0,37,960	0/0:44,0:44:87.21:0,87,1634	0/0:24,0:23:36.58:0,37,717	1/1:14,1:23:29.96:802,30,0	1/1:18,0:22:42.10:973,42,0	0/0:27,0:28:59.51:0,60,1115	1/1:8,20:28:42.04:1263,42,0	1/1:14,8:23:41.89:907,42,0	0/0:30,0:30:69.13:0,69,1331	0/0:19,0:19:33.04:0,33,578	1/1:23,2:20:32.98:590,33,0	1/1:16,24:44:55.54:1353,56,0	1/1:24,1:22:15.84:310,16,0	1/1:16,1:19:11.90:284,12,0	1/1:9,2:11:2.45:92,2,0	0/1:7,1:10:0:0,0,0	0/0:36,0:36:84.27:0,84,1657	0/0:34,0:33:72.17:0,72,1389	1/1:6,15:23:26.96:649,27,0	0/0:14,0:14:22.57:0,23,613
chr10	51008346	.	C	CAG	1232.71	PASS	AB=0.951;AC=16;AF=0.286;AN=56;BaseQRankSum=10.602;DP=795;FS=6.692;HRun=0;HaplotypeScore=234.9682;InbreedingCoeff=-0.1376;MQ=56.50;MQ0=29;MQRankSum=-9.661;QD=3.31;ReadPosRankSum=-3.020;VQSLOD=1.4527;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:20:39.60:40,0,52	0/1:11,1:12:34.03:34,0,34	0/0:38,0:11:13.54:0,14,175	0/1:70,0:29:1.68:2,0,264	0/0:28,0:28:75.25:0,75,1070	0/0:39,0:36:48.11:0,48,629	0/0:40,0:38:49.86:0,50,661	0/1:23,10:23:99:301,0,288	0/0:26,0:26:75.25:0,75,1060	0/0:44,0:43:99:0,116,1601	0/0:23,0:22:54.18:0,54,773	0/1:22,3:25:42.94:132,0,43	0/1:21,1:22:99:145,0,186	0/0:25,0:25:75.24:0,75,1047	0/1:25,1:25:99:206,0,118	0/1:20,0:20:99:154,0,168	0/0:31,0:31:81.93:0,82,1101	0/0:15,0:15:39.10:0,39,516	0/1:23,1:20:30.88:31,0,467	0/1:45,0:45:99:205,0,115	0/0:31,1:29:13.89:0,14,342	0/1:16,1:18:4.51:5,0,52	1/1:14,2:15:2.09:7,2,0	1/1:13,0:13:2.02:6,2,0	0/0:31,0:31:90.29:0,90,1265	0/0:39,0:38:99:0,114,1614	0/1:26,0:26:99:116,0,216	0/0:12,0:12:33.11:0,33,466
chr10	51008371	.	AGC	A	43.78	PASS	AB=0.987;AC=10;AF=0.179;AN=56;BaseQRankSum=10.425;DP=808;FS=1.139;HRun=0;HaplotypeScore=214.0733;InbreedingCoeff=0.4560;MQ=62.88;MQ0=19;MQRankSum=-6.145;QD=0.29;ReadPosRankSum=-5.883;VQSLOD=1.1595;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:11:8.58:27,9,0	0/0:10,0:10:9.02:0,9,168	0/0:48,0:23:36.46:0,36,635	0/0:73,0:31:9.11:0,9,556	0/0:33,0:33:48.18:0,48,1434	0/1:39,0:38:15.26:15,0,1202	0/1:40,0:37:5.10:5,0,728	0/0:42,0:36:99:0,105,1808	0/0:28,0:28:76.82:0,77,1466	0/0:47,0:47:99:0,135,2364	0/0:26,0:26:71.26:0,71,1317	0/1:17,0:18:28.89:29,0,92	0/0:16,0:16:1.35:0,1,196	0/0:23,0:23:66.13:0,66,1134	0/0:30,0:29:39.05:0,39,666	0/0:18,0:18:22.91:0,23,600	0/0:32,1:33:82.57:0,83,1525	0/0:14,0:14:23.08:0,23,653	0/0:24,0:23:42.20:0,42,1019	0/0:41,0:41:16.09:0,16,751	0/0:32,2:31:48.01:0,48,917	1/1:13,0:13:16.24:61,16,0	1/1:13,0:13:15.71:50,16,0	0/1:14,0:14:4.08:4,0,12	0/0:26,0:26:72.15:0,72,1219	0/0:44,0:43:99:0,129,2441	0/0:31,0:31:48.16:0,48,913	0/0:15,1:16:3.63:0,4,576
chr10	51008373	.	CGAGAGACA	C	3132.59	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=8.146;DP=794;FS=16.228;HRun=0;HaplotypeScore=254.9483;InbreedingCoeff=0.9370;MQ=63.40;MQ0=18;MQRankSum=-8.209;QD=36.85;ReadPosRankSum=-4.146;VQSLOD=1.6089;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:6,6:10:15.05:388,15,0	0/0:8,0:8:12.04:0,12,450	0/0:49,0:23:29.91:0,30,521	0/0:70,0:30:8.27:0,8,648	0/0:33,0:33:78.16:0,78,3134	0/0:37,0:37:74.88:0,75,2656	0/0:39,0:36:47.77:0,48,1802	0/0:41,0:38:93.25:0,93,3242	0/0:29,0:29:78.25:0,78,2765	0/0:48,0:48:99:0,117,4008	0/0:26,0:26:60.20:0,60,2280	1/1:7,10:18:30.10:777,30,0	1/1:6,10:16:39.10:866,39,0	0/0:23,0:23:57.18:0,57,2025	0/0:30,0:28:35.95:0,36,1512	0/0:20,0:20:39.13:0,39,1440	0/0:32,0:32:84.19:0,84,3164	0/0:14,0:14:33.11:0,33,1247	0/0:23,0:22:51.17:0,51,1665	0/0:39,0:39:50.30:0,50,1978	0/0:33,0:30:48.12:0,48,1843	1/1:5,8:13:21:528,21,0	1/1:4,9:13:26.87:674,27,0	1/1:7,6:13:2.61:78,3,0	0/0:23,0:23:45.15:0,45,1693	0/0:45,0:44:99:0,123,4507	0/0:28,0:28:48.16:0,48,1873	0/0:14,0:16:36.10:0,36,985
chr10	51008386	.	GAC	G	792.95	PASS	AB=0.945;AC=8;AF=0.143;AN=56;BaseQRankSum=10.784;DP=793;FS=13.911;HRun=0;HaplotypeScore=198.4817;InbreedingCoeff=0.4182;MQ=61.29;MQ0=26;MQRankSum=-8.351;QD=8.17;ReadPosRankSum=-3.540;VQSLOD=1.5788;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,0:9:14.50:142,14,0	0/0:8,0:8:15.05:0,15,272	0/0:47,0:17:22.79:0,23,326	0/0:67,0:30:14.88:0,15,377	0/0:31,0:31:84.15:0,84,1566	0/0:36,0:36:70.89:0,71,1320	0/0:36,0:33:54.13:0,54,993	0/0:41,0:39:99:0,111,1970	0/0:29,0:29:87.21:0,87,1529	0/0:48,0:48:99:0,120,2208	0/0:24,0:24:66.18:0,66,1166	0/1:18,1:18:40.32:135,0,40	1/1:15,2:16:16.25:253,16,0	0/0:22,0:22:65.22:0,65,1125	0/0:35,0:34:45.14:0,45,829	0/0:20,0:20:45.02:0,45,808	0/0:36,0:36:99:0,103,1825	0/0:13,0:13:36.08:0,36,624	0/0:23,0:21:63.02:0,63,1049	0/0:34,0:32:54.18:0,54,1024	0/0:35,0:32:51.14:0,51,947	0/1:17,1:18:46.68:104,0,47	0/1:18,1:19:81.52:295,0,82	0/1:13,1:14:6.06:6,0,18	0/0:19,0:19:54.14:0,54,937	0/0:47,0:46:99:0,138,2391	0/0:29,0:29:51.08:0,51,901	0/0:14,0:14:34.07:0,34,553
chr10	51008408	.	A	AAC	5539.42	PASS	AB=0.794;AC=15;AF=0.268;AN=56;BaseQRankSum=0.580;DP=734;FS=6.208;HRun=0;HaplotypeScore=168.4471;InbreedingCoeff=0.9027;MQ=55.21;MQ0=25;MQRankSum=-0.766;QD=25.89;ReadPosRankSum=-2.179;VQSLOD=4.8097;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:14.92:0,15,133	1/1:3,4:8:18.06:293,18,0	0/0:47,0:15:27.08:0,27,323	0/0:58,0:26:36.10:0,36,443	0/0:32,0:32:63.12:0,63,721	0/0:28,0:28:44.93:0,45,513	0/0:35,0:34:44.79:0,45,461	1/1:23,26:45:78.04:1089,78,0	0/0:25,0:25:60.14:0,60,709	0/0:39,0:39:87.25:0,87,1044	0/0:19,0:19:45.14:0,45,552	0/0:16,0:15:32.94:0,33,353	0/0:14,0:13:21.02:0,21,241	0/0:24,0:24:63.02:0,63,715	1/1:8,22:28:69.11:1012,69,0	1/1:3,15:18:42.14:653,42,0	0/0:34,0:34:90.20:0,90,1075	0/0:13,0:13:29.96:0,30,306	0/1:20,7:22:5.76:405,0,6	1/1:11,16:25:11.32:672,11,0	1/1:16,15:29:8.20:560,8,0	0/0:18,0:18:29.96:0,30,317	0/0:20,0:20:24.72:0,25,267	0/0:12,0:12:17.94:0,18,171	0/0:18,0:18:35.02:0,35,377	0/0:42,0:42:99:0,104,1210	1/1:12,11:23:54.18:856,54,0	0/0:12,0:12:27:0,27,277
chr10	51008440	.	A	AACACACAC	2231.68	PASS	AB=1.000;AC=30;AF=0.536;AN=56;BaseQRankSum=6.443;DP=662;FS=9.932;HRun=0;HaplotypeScore=218.2616;InbreedingCoeff=0.6814;MQ=56.20;MQ0=26;MQRankSum=1.366;QD=7.22;ReadPosRankSum=-0.741;VQSLOD=0.9528;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:12,2:13:1.34:86,1,0	1/1:6,0:6:5.19:30,5,0	0/0:46,0:15:12.04:0,12,269	0/0:50,0:21:16.26:0,16,260	0/0:29,0:29:59.25:0,59,1344	1/1:21,0:20:3.31:25,3,0	1/1:29,0:28:8.80:60,9,0	0/1:38,0:31:15.63:193,0,16	0/0:21,0:19:38.77:0,39,943	0/0:35,0:34:90.29:0,90,2097	0/0:19,0:19:39.02:0,39,850	1/1:15,1:16:9.03:260,9,0	1/1:8,2:7:7.78:277,8,0	0/0:20,0:20:54.17:0,54,1337	1/1:32,0:29:19.02:242,19,0	1/1:17,0:17:7.91:35,8,0	0/0:38,0:38:90.28:0,90,2181	0/1:11,0:12:38.41:38,0,367	1/1:20,0:14:18.66:160,19,0	1/1:18,0:17:4.49:36,4,0	1/1:23,0:23:8.28:35,8,0	0/0:8,15:29:0.47:0,0,1	1/1:20,1:22:28.03:668,28,0	1/1:14,1:16:8.98:209,9,0	0/0:19,0:19:43.94:0,44,793	0/0:31,0:31:81.21:0,81,1805	1/1:14,0:14:13.52:80,14,0	0/0:16,0:15:42.14:0,42,1021
chr10	51008450	.	CAGAGAG	C	275.65	PASS	AC=6;AF=0.115;AN=52;BaseQRankSum=4.558;DP=679;FS=7.928;HRun=0;HaplotypeScore=196.5708;InbreedingCoeff=0.5945;MQ=53.30;MQ0=24;MQRankSum=-4.632;QD=3.99;ReadPosRankSum=-1.871;VQSLOD=1.0525;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:16:2.21:0,2,34	0/0:7,0:7:6.02:0,6,160	./.	./.	0/0:31,0:31:39.13:0,39,985	1/1:23,0:22:1.77:4,2,0	0/0:32,0:32:17.95:0,18,275	0/0:36,0:30:27.84:0,28,477	0/0:20,0:21:24.08:0,24,647	0/0:40,0:39:60.16:0,60,1304	0/0:22,0:22:29.72:0,30,856	0/0:16,0:16:9.03:0,9,274	0/0:15,0:11:14.68:0,15,177	0/0:22,0:23:27.09:0,27,695	0/0:29,0:29:16.60:0,17,377	0/0:19,0:19:14.04:0,14,287	0/0:30,0:34:44.17:0,44,1100	0/0:14,0:14:13.86:0,14,401	0/0:21,0:16:21.07:0,21,459	0/0:21,0:20:5.15:0,5,97	0/0:25,0:25:5.99:0,6,74	1/1:25,0:25:0.89:2,1,0	0/0:21,0:24:23.73:0,24,486	0/0:17,0:18:17.52:0,18,366	1/1:9,9:21:21.07:366,21,0	0/0:34,0:36:9.70:0,10,1416	0/0:16,0:16:12.98:0,13,236	0/0:15,0:14:27.09:0,27,725
chr10	51009292	.	ACG	A	1439.70	PASS	AB=0.993;AC=15;AF=0.268;AN=56;BaseQRankSum=6.645;DP=622;FS=3.069;HRun=0;HaplotypeScore=122.5774;InbreedingCoeff=0.3008;MQ=59.04;MQ0=10;MQRankSum=-2.571;QD=6.26;ReadPosRankSum=-2.868;VQSLOD=2.9523;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:32.42:0,32,559	0/1:9,0:9:8.61:15,0,9	0/0:25,0:13:8.23:0,8,258	0/0:29,0:13:5.90:0,6,213	0/0:27,0:27:41.70:0,42,838	0/1:22,0:22:0.86:1,0,534	0/0:31,0:31:24.70:0,25,643	1/1:26,0:25:12.35:394,12,0	0/0:16,0:16:45.04:0,45,719	0/1:25,0:24:79.18:79,0,413	0/0:11,0:11:27.03:0,27,317	0/0:25,0:25:47.79:0,48,521	0/0:21,1:22:28.55:0,29,298	0/1:14,1:15:5.67:6,0,514	0/1:20,0:20:5.93:138,0,6	0/1:22,0:22:0.12:139,0,0	0/0:24,0:24:38.35:0,38,730	0/0:28,0:28:50.19:0,50,810	0/1:14,0:14:21.83:89,0,22	1/1:19,0:19:6.81:131,7,0	1/1:24,1:25:48:414,48,0	0/0:26,0:26:32.55:0,33,265	0/0:15,0:14:30:0,30,289	0/0:32,1:32:40.80:0,41,608	0/0:19,0:19:29.72:0,30,587	0/0:28,0:28:64.03:0,64,1011	0/1:23,0:23:18.63:193,0,19	0/1:10,0:9:1.34:1,0,232
chr10	51009867	.	CCAAT	C	1924.91	PASS	AB=0.533;AC=15;AF=0.268;AN=56;BaseQRankSum=6.513;DP=544;FS=30.417;HRun=0;HaplotypeScore=109.7404;InbreedingCoeff=0.9329;MQ=79.10;MQ0=4;MQRankSum=-4.857;QD=16.59;ReadPosRankSum=0.199;VQSLOD=1.5628;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:54.14:0,54,1180	1/1:9,0:9:15.05:211,15,0	0/0:28,0:20:46.48:0,46,829	0/0:47,0:27:57.20:0,57,1013	0/0:28,0:28:75.15:0,75,1659	0/0:27,0:26:54.14:0,54,1231	0/0:18,0:18:45.11:0,45,1028	1/1:6,18:24:54.18:1014,54,0	0/0:16,0:16:45.14:0,45,980	0/0:23,0:23:66.23:0,66,1606	0/0:25,0:25:66.14:0,66,1520	0/0:22,0:22:54.07:0,54,1239	0/0:23,0:23:66.21:0,66,1510	0/0:17,0:17:51.15:0,51,1089	1/1:17,0:17:14.88:176,15,0	1/1:16,1:17:14.79:214,15,0	0/0:18,0:18:51.10:0,51,1113	0/0:19,0:19:54.14:0,54,1187	1/1:1,4:5:11.78:182,12,0	1/1:13,4:17:9.03:152,9,0	0/1:2,14:15:0.01:0,0,0	0/0:15,0:15:45.15:0,45,1048	0/0:14,0:14:42.14:0,42,880	0/0:16,0:16:39.13:0,39,778	0/0:24,0:24:66.18:0,66,1582	0/0:19,0:19:54.19:0,54,1361	1/1:1,10:11:9.03:162,9,0	0/0:10,0:9:24.08:0,24,584
chr10	51009868	.	CAATCAGAGAGAGAG	C	2727	PASS	AB=0.902;AC=12;AF=0.214;AN=56;BaseQRankSum=5.544;DP=538;FS=28.069;HRun=0;HaplotypeScore=195.0124;InbreedingCoeff=0.6330;MQ=79.26;MQ0=4;MQRankSum=-4.091;QD=23.71;ReadPosRankSum=1.111;VQSLOD=0.9939;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:54.14:0,54,2030	1/1:0,6:9:15.05:528,15,0	0/0:28,0:20:46.48:0,46,829	0/0:47,0:27:57.42:0,57,1015	0/0:26,0:26:75.15:0,75,2447	0/0:27,0:26:54.14:0,54,1627	0/0:17,0:17:48.12:0,48,1642	1/1:23,0:23:38.84:888,39,0	0/0:16,0:16:48.16:0,48,2015	0/0:23,0:23:66.23:0,66,2822	0/0:25,0:25:66.14:0,66,2258	0/0:22,0:22:54.04:0,54,1742	0/0:22,0:22:66.21:0,66,2781	0/0:17,0:17:51.15:0,51,1469	1/1:0,17:17:15.05:620,15,0	1/1:1,15:17:15.05:561,15,0	0/0:18,0:18:51.10:0,51,2193	0/0:19,0:19:54.17:0,54,2477	0/1:5,0:5:99:159,0,118	0/1:6,0:17:44.41:44,0,82	0/1:16,0:15:0:0,0,0	0/0:15,0:15:45.15:0,45,1435	0/0:14,0:14:42.14:0,42,1620	0/0:16,0:16:39.13:0,39,1526	0/0:24,0:24:66.18:0,66,2438	0/0:18,0:18:54.19:0,54,1990	0/1:11,0:11:81.39:95,0,81	0/0:10,0:9:24.08:0,24,1182
chr10	51009872	.	CAG	C	958.49	PASS	AB=0.941;AC=27;AF=0.500;AN=54;BaseQRankSum=4.751;DP=574;FS=1.408;HRun=0;HaplotypeScore=101.8174;InbreedingCoeff=0.1452;MQ=73.18;MQ0=5;MQRankSum=0.519;QD=2.78;ReadPosRankSum=2.918;VQSLOD=2.1180;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:21:13.71:106,14,0	1/1:9,0:9:11.36:56,11,0	./.	0/0:43,0:23:0:0,0,0	1/1:24,5:29:3:32,3,0	0/0:21,0:33:6.02:0,6,86	0/0:19,0:18:9:0,9,77	0/0:22,0:22:0:0,0,0	0/1:13,4:17:99:104,0,128	0/1:22,0:22:21.41:21,0,232	0/0:29,0:29:7.99:0,8,167	1/1:15,7:22:9.02:96,9,0	0/1:25,0:25:23.30:23,0,285	0/1:14,1:15:14.92:55,0,15	1/1:17,0:17:11.83:56,12,0	1/1:17,0:17:11.36:56,11,0	0/0:20,0:20:20.79:0,21,255	0/1:16,0:17:31.10:31,0,237	0/0:7,0:7:7.58:0,8,93	0/1:22,0:21:23.74:24,0,85	0/0:17,0:16:3.01:0,3,44	1/1:17,0:17:8.60:67,9,0	1/1:14,1:15:17.85:151,18,0	1/1:14,3:17:9.65:177,10,0	0/1:27,0:27:2.84:3,0,302	0/1:21,4:25:40.62:41,0,128	0/0:11,0:11:2.32:0,2,8	0/1:10,1:10:21.21:23,0,21
chr10	51011066	.	CT	C	8499.22	PASS	AC=52;AF=0.963;AN=54;BaseQRankSum=0.425;DP=271;FS=13.961;HRun=2;HaplotypeScore=77.9475;InbreedingCoeff=0.5504;MQ=43.12;MQ0=0;MQRankSum=-2.118;QD=31.83;ReadPosRankSum=2.561;VQSLOD=3.4275;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,8:8:18.06:233,18,0	1/1:1,6:7:18.06:233,18,0	0/0:3,0:3:3.01:0,3,52	./.	1/1:0,16:16:40.34:541,40,0	1/1:2,18:20:48.15:622,48,0	1/1:1,8:9:21.07:272,21,0	1/1:1,13:14:39.13:506,39,0	1/1:2,8:10:24.08:311,24,0	1/1:0,6:6:18.06:233,18,0	1/1:0,10:10:13.26:191,13,0	1/1:2,13:15:39.13:505,39,0	1/1:2,5:7:18.06:225,18,0	1/1:1,7:8:21.07:272,21,0	1/1:1,13:14:33.11:428,33,0	1/1:3,8:11:21.06:272,21,0	1/1:0,9:9:21.07:272,21,0	1/1:1,2:3:6.02:78,6,0	1/1:1,8:9:21.07:272,21,0	1/1:0,9:9:27.09:350,27,0	1/1:0,3:2:6.02:78,6,0	1/1:0,14:14:36.12:466,36,0	1/1:2,11:13:27.08:350,27,0	1/1:1,6:7:12.04:155,12,0	1/1:0,13:13:33.10:428,33,0	1/1:0,12:12:36.12:467,36,0	1/1:1,15:16:45.15:583,45,0	1/1:0,4:4:12.04:156,12,0
chr10	51013715	.	CA	C	734	PASS	AB=0.687;AC=9;AF=0.161;AN=56;BaseQRankSum=0.320;DP=602;FS=0.500;HRun=15;HaplotypeScore=97.0519;InbreedingCoeff=0.5457;MQ=71.84;MQ0=1;MQRankSum=0.375;QD=5.65;ReadPosRankSum=4.978;VQSLOD=2.7837;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:16,16:32:99:157,0,124	0/0:4,0:7:8.78:0,9,60	0/0:29,0:23:18.78:0,19,131	0/0:20,0:14:24.07:0,24,164	0/0:19,2:23:18.03:0,18,362	0/0:24,0:24:12.30:0,12,179	0/0:23,0:23:16.03:0,16,201	0/0:9,0:21:38.30:0,38,209	0/0:13,0:13:20.97:0,21,178	0/0:26,2:28:31.55:0,32,376	0/0:16,1:17:19.69:0,20,287	1/1:13,4:18:20.92:122,21,0	0/1:11,6:17:26.48:92,0,26	0/0:20,1:21:22.64:0,23,304	0/0:13,0:24:26.65:0,27,166	0/0:6,0:18:9.57:0,10,57	0/0:28,1:29:67.10:0,67,548	0/0:17,0:17:32.91:0,33,264	0/0:13,0:23:37.88:0,38,210	0/0:9,0:27:55.85:0,56,311	0/0:1,0:9:8.99:0,9,44	1/1:11,15:29:13.49:250,13,0	0/1:8,8:17:24.96:111,0,25	1/1:10,6:17:25.44:159,25,0	0/0:17,3:21:19.35:0,19,254	0/0:30,1:32:12.95:0,13,396	0/0:13,0:28:42.24:0,42,237	0/0:12,0:16:29.67:0,30,236
chr10	51013730	.	AC	A	442.33	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.672;DP=606;FS=8.415;HRun=3;HaplotypeScore=83.4830;InbreedingCoeff=0.9790;MQ=74.26;MQ0=1;MQRankSum=1.199;QD=10.79;ReadPosRankSum=-1.853;VQSLOD=0.5100;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:61.19:0,61,439	0/0:5,0:5:13.47:0,13,102	0/0:32,0:23:30.25:0,30,302	0/0:27,0:20:22.70:0,23,265	0/0:23,0:23:54.77:0,55,527	1/1:19,2:21:37.30:296,37,0	1/1:19,1:20:27.03:268,27,0	0/0:25,0:25:57.91:0,58,555	0/0:12,1:13:30.06:0,30,317	0/0:25,0:25:56.60:0,57,683	0/0:17,0:17:44.47:0,44,488	0/0:22,0:22:51.37:0,51,392	0/0:16,1:17:17.51:0,18,254	0/0:21,0:21:48.82:0,49,469	0/0:19,0:19:34.52:0,35,310	0/0:16,0:16:23.99:0,24,219	0/0:32,0:32:88.35:0,88,933	0/0:18,0:18:47.88:0,48,472	0/0:19,0:18:51:0,51,479	0/0:27,0:27:62.54:0,63,543	0/0:13,0:13:23.86:0,24,181	0/0:31,0:31:56.65:0,57,390	0/0:15,0:15:33.76:0,34,208	0/0:20,0:20:41.04:0,41,290	0/0:21,0:21:47.41:0,47,462	0/0:30,0:30:77.86:0,78,766	0/0:28,0:28:62.78:0,63,542	0/0:14,0:14:35.05:0,35,359
chr10	51017082	.	AACACACACACAC	A	2699.01	PASS	AC=12;AF=0.222;AN=54;BaseQRankSum=6.290;DP=573;FS=5.305;HRun=0;HaplotypeScore=191.3839;InbreedingCoeff=0.8927;MQ=60.41;MQ0=9;MQRankSum=-6.689;QD=20.76;ReadPosRankSum=1.887;VQSLOD=2.3191;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:14,5:19:15:369,15,0	0/0:11,0:10:12.04:0,12,417	0/0:38,0:28:6.02:0,6,79	./.	0/0:16,0:14:24.08:0,24,1048	0/0:10,0:21:15.94:0,16,465	0/0:11,0:13:18.06:0,18,518	0/0:22,0:22:21.07:0,21,698	0/0:14,0:23:26.83:0,27,967	0/0:21,0:21:51.17:0,51,2109	0/0:16,0:19:39.13:0,39,2106	1/1:9,14:22:26.88:909,27,0	1/1:10,7:17:9.03:283,9,0	0/0:15,0:16:18.06:0,18,851	0/0:14,0:21:18.06:0,18,790	0/0:21,0:27:17.82:0,18,834	0/0:27,0:26:34.67:0,35,1728	0/0:16,0:16:29.13:0,29,1330	0/0:12,0:12:21.94:0,22,504	0/0:21,0:27:12.04:0,12,507	0/0:16,0:23:12.04:0,12,546	1/1:19,9:29:20.86:683,21,0	1/1:18,5:23:21.06:545,21,0	1/1:14,3:18:2.80:84,3,0	0/0:17,0:19:45.15:0,45,2402	0/0:13,0:12:24.08:0,24,910	0/0:21,0:21:24.08:0,24,1032	0/0:9,0:9:24.08:0,24,1037
chr10	51017894	.	TG	T	5092.56	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=14.799;DP=439;FS=1.729;HRun=6;HaplotypeScore=106.4676;InbreedingCoeff=0.9500;MQ=85.27;MQ0=0;MQRankSum=-13.989;QD=22.05;ReadPosRankSum=-1.425;VQSLOD=3.1755;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,22:26:48.08:491,48,0	1/1:2,4:6:18.03:184,18,0	0/0:20,0:20:48:0,48,619	0/0:16,0:16:39.09:0,39,468	0/0:6,0:6:12.04:0,12,158	1/1:2,14:16:36.08:379,36,0	1/1:5,25:30:56.17:599,56,0	1/1:5,14:19:41.82:432,42,0	0/0:20,0:20:57.15:0,57,717	0/0:22,0:22:66.21:0,66,855	0/0:15,0:15:42.12:0,42,536	1/1:1,15:16:42.11:449,42,0	1/1:4,14:18:42.09:443,42,0	0/0:20,0:20:54.18:0,54,708	1/1:3,16:19:51.12:541,51,0	1/1:1,9:10:27.07:289,27,0	0/0:29,0:29:87.28:0,87,1139	0/0:19,0:19:54.18:0,54,709	1/1:2,10:12:33.02:333,33,0	1/1:2,8:10:18.03:185,18,0	1/1:3,12:15:18.04:186,18,0	1/1:0,5:5:3:32,3,0	1/1:2,5:7:6.01:64,6,0	1/1:2,8:10:14.99:146,15,0	0/0:21,0:21:63.20:0,63,828	0/0:13,0:13:39.13:0,39,511	1/1:3,9:12:33.04:340,33,0	0/0:7,0:7:18.06:0,18,237
chr10	51017917	.	T	TC	9011.17	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=5.406;DP=473;FS=2.085;HRun=1;HaplotypeScore=94.1602;InbreedingCoeff=0.9807;MQ=86.08;MQ0=0;MQRankSum=-10.748;QD=35.34;ReadPosRankSum=-1.226;VQSLOD=4.4407;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,32:35:80.64:1139,81,0	1/1:0,5:5:15.05:224,15,0	0/0:22,0:22:60.16:0,60,740	0/0:16,0:16:44.39:0,44,508	0/0:12,0:12:36.12:0,36,467	1/1:0,11:11:21.07:314,21,0	1/1:2,17:19:44.64:641,45,0	1/1:4,14:18:48.15:684,48,0	0/0:24,0:24:69.22:0,69,895	0/0:21,0:21:63.20:0,63,818	0/0:12,0:12:33.11:0,33,428	1/1:1,25:26:72.24:1056,72,0	1/1:2,15:17:39.10:558,39,0	0/0:21,0:21:63.20:0,63,818	1/1:2,25:27:78.26:1158,78,0	1/1:1,12:13:36.12:539,36,0	0/0:23,0:23:66.21:0,66,856	0/0:17,0:17:48.16:0,48,623	1/1:4,13:17:48.16:709,48,0	1/1:1,7:8:18.02:244,18,0	1/1:1,20:21:39.09:557,39,0	1/1:2,3:5:8.99:110,9,0	1/1:0,6:6:12.04:180,12,0	1/1:2,8:10:14.79:224,15,0	0/0:25,0:25:75.24:0,75,973	0/0:18,0:18:45.15:0,45,584	1/1:1,16:17:45.15:674,45,0	0/0:7,0:7:21.07:0,21,271
chr10	51020445	.	TGGG	T	4156.23	PASS	AB=0.600;AC=15;AF=0.268;AN=56;BaseQRankSum=10.335;DP=544;FS=6.328;HRun=10;HaplotypeScore=104.8686;InbreedingCoeff=0.8747;MQ=77.76;MQ0=0;MQRankSum=-8.498;QD=28.86;ReadPosRankSum=3.760;VQSLOD=2.5163;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:21.96:0,22,357	0/1:2,4:6:14.36:111,0,14	0/0:20,0:19:42.05:0,42,660	0/0:16,0:16:29.62:0,30,425	0/0:23,0:24:45.13:0,45,884	0/0:8,0:20:12.04:0,12,175	0/0:14,0:24:26.54:0,27,293	1/1:2,22:24:63.09:784,63,0	0/0:13,0:14:36.10:0,36,678	0/0:24,0:24:29.61:0,30,737	0/0:23,0:23:48.15:0,48,944	0/0:4,0:10:6.02:0,6,77	0/0:10,0:19:15.89:0,16,202	0/0:23,0:23:48.62:0,49,926	1/1:5,16:21:42.13:573,42,0	1/1:3,21:24:57.18:778,57,0	0/0:26,0:29:66.17:0,66,1237	0/0:12,0:13:36.10:0,36,706	1/1:5,10:15:30.06:376,30,0	1/1:3,15:18:39.10:513,39,0	1/1:1,15:16:21.06:286,21,0	0/0:12,0:18:17.91:0,18,276	0/0:18,0:21:23.93:0,24,378	0/0:12,0:20:9.02:0,9,130	0/0:19,0:22:45.08:0,45,781	0/0:21,0:21:36.10:0,36,707	1/1:0,20:20:54.18:736,54,0	0/0:15,0:15:30.10:0,30,607
chr10	51020641	.	TAGAG	T	363.89	PASS	AB=0.785;AC=9;AF=0.161;AN=56;BaseQRankSum=7.645;DP=544;FS=7.983;HRun=0;HaplotypeScore=105.0258;InbreedingCoeff=0.2328;MQ=95.15;MQ0=0;MQRankSum=-5.650;QD=8.88;ReadPosRankSum=1.174;VQSLOD=2.1816;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:93.32:0,93,2617	0/1:2,2:4:59.89:60,0,98	0/0:30,0:30:90.31:0,90,2518	0/0:22,0:22:63.22:0,63,1758	0/0:25,0:25:75.26:0,75,2139	0/0:23,0:23:69.24:0,69,1972	0/0:33,0:33:99:0,99,2700	0/1:9,0:9:26.72:27,0,207	0/0:22,0:22:66.23:0,66,1890	0/0:18,0:18:54.19:0,54,1514	0/0:33,0:33:99:0,99,2708	0/0:22,0:22:66.23:0,66,1900	0/0:23,0:23:69.24:0,69,1911	0/0:28,0:28:84.29:0,84,2392	0/1:3,1:4:21.30:21,0,26	1/1:2,4:6:0.92:113,1,0	0/0:20,0:20:60.21:0,60,1681	0/0:13,0:13:39.13:0,39,1096	0/1:4,1:5:28.04:28,0,64	0/1:2,3:5:35.74:91,0,36	0/0:16,0:16:6.79:0,7,292	0/0:19,0:19:57.20:0,57,1621	0/0:22,0:22:63.22:0,63,1808	0/0:22,0:22:66.23:0,66,1891	0/0:33,0:33:99:0,99,2775	0/0:38,0:38:99:0,114,3197	1/1:3,5:8:15.89:165,16,0	0/0:9,0:9:24.08:0,24,672
chr10	51020647	.	TACTGTAGAACTACTTTA	T	1716.64	PASS	AB=0.687;AC=6;AF=0.107;AN=56;BaseQRankSum=6.802;DP=538;FS=6.840;HRun=0;HaplotypeScore=250.8988;InbreedingCoeff=-0.1218;MQ=96.01;MQ0=0;MQRankSum=-6.214;QD=46.40;ReadPosRankSum=3.677;VQSLOD=2.1355;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,102,6995	0/1:1,2:3:99:248,0,247	0/0:31,0:31:93.31:0,93,5668	0/0:22,0:22:66.23:0,66,3770	0/0:25,0:25:75.26:0,75,6022	0/0:23,0:23:69.24:0,69,5454	0/0:33,0:33:99:0,99,6481	0/0:7,0:7:21.07:0,21,406	0/0:22,0:22:66.23:0,66,5056	0/0:18,0:18:54.19:0,54,3963	0/0:28,0:28:84.29:0,84,6582	0/0:25,0:25:75.26:0,75,5703	0/0:25,0:25:75.26:0,75,5511	0/0:29,0:29:87.30:0,87,6546	0/1:1,1:2:54.33:115,0,54	0/1:3,4:7:99:474,0,124	0/0:20,0:20:60.19:0,60,4598	0/0:13,0:13:39.13:0,39,3034	0/1:7,1:8:99:156,0,336	0/1:2,3:5:48.25:369,0,48	0/0:4,0:4:11.70:0,12,114	0/0:18,0:18:54.17:0,54,3725	0/0:22,0:22:66.23:0,66,4776	0/0:22,0:22:66.23:0,66,4644	0/0:31,0:31:93.30:0,93,6536	0/0:41,0:41:99:0,123,8801	0/1:7,5:12:99:479,0,379	0/0:7,0:7:21.07:0,21,1791
chr10	51021028	.	AGG	A	2141.39	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=14.270;DP=730;FS=2.591;HRun=3;HaplotypeScore=126.2922;InbreedingCoeff=0.9821;MQ=80.85;MQ0=0;MQRankSum=-14.396;QD=21.85;ReadPosRankSum=1.597;VQSLOD=1.8189;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:63,0:63:99:0,190,3589	1/1:0,4:4:9.01:86,9,0	0/0:26,0:25:66.23:0,66,1261	0/0:16,0:17:44.35:0,44,682	0/0:27,0:27:81.27:0,81,1522	0/0:21,0:21:63.20:0,63,1184	0/0:39,0:39:99:0,111,2111	1/1:5,11:16:33.07:340,33,0	0/0:28,0:28:84.29:0,84,1588	0/0:35,0:35:99:0,102,1968	0/0:31,0:31:90.30:0,90,1660	0/0:27,0:27:78.27:0,78,1506	0/0:36,0:36:99:0,102,1970	0/0:34,0:34:99:0,102,1971	1/1:0,19:19:54.09:523,54,0	1/1:1,12:13:33.06:324,33,0	0/0:42,0:42:99:0,126,2410	0/0:21,0:21:63.22:0,63,1214	1/1:3,11:14:33.04:334,33,0	1/1:0,18:18:48.08:464,48,0	1/1:0,5:5:12.02:126,12,0	0/0:30,0:30:90.31:0,90,1727	0/0:29,0:29:87.27:0,87,1592	0/0:37,0:37:99:0,111,2137	0/0:28,0:28:84.28:0,84,1591	0/0:45,0:45:99:0,135,2544	1/1:2,7:9:15.03:149,15,0	0/0:16,0:16:48.16:0,48,890
chr10	51021032	.	TAGA	T	2635.82	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=14.399;DP=733;FS=3.229;HRun=0;HaplotypeScore=145.0998;InbreedingCoeff=0.9799;MQ=79.58;MQ0=0;MQRankSum=-13.719;QD=25.10;ReadPosRankSum=1.762;VQSLOD=3.9209;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:67,0:67:99:0,202,4666	1/1:4,4:8:8.50:106,8,0	0/0:25,0:24:69.24:0,69,1520	0/0:17,0:17:19.03:0,19,777	0/0:24,0:24:69.22:0,69,1547	0/0:19,0:19:54.18:0,54,1225	0/0:36,0:36:99:0,105,2437	1/1:2,11:13:33.11:416,33,0	0/0:29,0:29:87.28:0,87,1976	0/0:34,0:34:96.33:0,96,2256	0/0:29,0:29:81.26:0,81,1811	0/0:27,0:27:81.28:0,81,1887	0/0:36,0:36:99:0,108,2525	0/0:34,0:34:99:0,102,2371	1/1:2,19:21:54.16:646,54,0	1/1:2,12:14:33.10:399,33,0	0/0:41,0:41:99:0,123,2905	0/0:23,0:23:69.24:0,69,1595	1/1:4,11:14:27.88:378,28,0	1/1:3,18:21:48.15:574,48,0	1/1:2,4:6:12.03:138,12,0	0/0:30,0:30:84.29:0,84,1960	0/0:27,0:27:78.27:0,78,1759	0/0:36,0:36:99:0,105,2469	0/0:30,0:30:87.28:0,87,2009	0/0:48,0:48:99:0,141,3249	1/1:0,7:7:15.05:184,15,0	0/0:16,0:16:48.16:0,48,1133
chr10	51021136	.	TTC	T	2659.60	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=13.258;DP=758;FS=35.547;HRun=0;HaplotypeScore=115.4952;InbreedingCoeff=0.9781;MQ=69.29;MQ0=0;MQRankSum=-12.433;QD=28.91;ReadPosRankSum=-0.051;VQSLOD=2.4817;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,128,2817	1/1:2,3:5:9.50:130,10,0	0/0:27,0:25:75.25:0,75,1431	0/0:33,0:33:99:0,99,1803	0/0:32,0:32:96.33:0,96,1950	0/0:16,0:16:48.16:0,48,960	0/0:31,0:31:93.32:0,93,1864	1/1:0,6:5:15.05:213,15,0	0/0:35,0:35:99:0,105,2134	0/0:48,0:48:99:0,144,2864	0/0:23,0:23:69.24:0,69,1402	0/0:37,0:37:99:0,111,2255	0/0:32,0:32:96.30:0,96,1889	0/0:35,0:35:99:0,102,2071	1/1:0,10:10:27.09:380,27,0	1/1:2,8:10:27.09:400,27,0	0/0:33,0:33:99:0,99,2004	0/0:27,0:27:81.21:0,81,1565	1/1:1,4:5:9.01:125,9,0	1/1:2,13:14:30.10:431,30,0	1/1:7,17:24:42.12:613,42,0	0/0:28,0:28:84.27:0,84,1607	0/0:26,0:26:78.26:0,78,1550	0/0:54,0:54:99:0,157,3116	0/0:33,0:32:99:0,99,1967	0/0:45,0:45:99:0,135,2692	1/1:0,17:17:39.13:571,39,0	0/0:20,0:20:60.21:0,60,1219
chr10	51021260	.	TTCCAGGTAGCTAGGGTGAGGG	T	7133.08	PASS	AB=0.545;AC=13;AF=0.241;AN=54;BaseQRankSum=10.946;DP=684;FS=25.896;HRun=0;HaplotypeScore=355.9146;InbreedingCoeff=0.8786;MQ=60.03;MQ0=2;MQRankSum=-10.777;QD=92.64;ReadPosRankSum=1.781;VQSLOD=3.5929;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:67,0:67:99:0,193,18116	1/1:0,8:8:15.05:885,15,0	0/0:14,0:8:24.08:0,24,1347	0/0:18,0:11:29.13:0,29,1745	0/0:31,0:31:87.30:0,87,8065	0/0:12,0:12:36.12:0,36,2893	0/0:34,0:34:96.33:0,96,8900	./.	0/0:35,0:35:99:0,102,9856	0/0:35,0:35:99:0,105,8855	0/0:20,0:20:60.21:0,60,5483	0/0:37,0:37:99:0,111,10052	0/0:40,0:40:99:0,117,10347	0/0:39,0:39:99:0,114,10410	1/1:1,9:10:15.05:884,15,0	0/1:2,10:12:99:1040,0,282	0/0:25,0:25:75.26:0,75,6990	0/0:19,0:18:54.16:0,54,4594	1/1:2,4:4:12.04:572,12,0	1/1:4,12:16:27.09:1467,27,0	1/1:3,6:9:11.95:338,12,0	0/0:25,0:25:72.25:0,72,6245	0/0:23,0:23:66.23:0,66,6481	0/0:40,0:40:99:0,117,10540	0/0:29,0:29:81.28:0,81,7514	0/0:37,0:37:99:0,102,8881	1/1:4,12:16:33.11:1946,33,0	0/0:17,0:17:48.16:0,48,4488
chr10	51021893	.	A	AGTC	2376	PASS	AC=14;AF=0.259;AN=54;BaseQRankSum=10.474;DP=642;FS=32.171;HRun=0;HaplotypeScore=99.5618;InbreedingCoeff=0.9706;MQ=65.80;MQ0=2;MQRankSum=-9.060;QD=25.55;ReadPosRankSum=-2.390;VQSLOD=1.6200;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,117,1905	1/1:1,9:10:9.03:203,9,0	0/0:16,0:15:45.11:0,45,689	0/0:29,0:30:67.02:0,67,1211	0/0:19,0:19:48.15:0,48,770	0/0:35,0:35:99:0,102,1699	0/0:19,0:19:54.17:0,54,876	1/1:5,6:5:9.02:162,9,0	0/0:23,0:23:69.22:0,69,1107	0/0:32,0:32:90.30:0,90,1474	0/0:27,0:27:81.28:0,81,1349	0/0:18,0:18:51.17:0,51,850	0/0:49,0:49:99:0,138,2246	0/0:24,0:24:72.23:0,72,1174	1/1:3,11:15:27.09:603,27,0	1/1:2,8:8:18.06:405,18,0	0/0:33,0:33:99:0,99,1645	0/0:31,0:31:90.31:0,90,1495	1/1:4,6:7:18.06:384,18,0	1/1:6,12:15:18.06:406,18,0	./.	0/0:28,0:28:81.24:0,81,1317	0/0:23,0:23:69.24:0,69,1148	0/0:37,0:37:99:0,99,1649	0/0:22,0:22:63.22:0,63,1045	0/0:36,0:36:99:0,102,1618	1/1:2,11:13:18.06:402,18,0	0/0:6,0:6:18.06:0,18,300
chr10	51022009	.	TGC	T	5020.96	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=16.017;DP=704;FS=13.176;HRun=0;HaplotypeScore=105.2504;InbreedingCoeff=0.9949;MQ=60.70;MQ0=5;MQRankSum=-8.988;QD=39.85;ReadPosRankSum=2.954;VQSLOD=6.1612;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,163,3257	1/1:0,8:8:21.07:342,21,0	0/0:27,0:21:56.72:0,57,1131	0/0:23,0:17:48.16:0,48,967	0/0:39,0:39:99:0,114,2281	0/0:28,0:28:78.27:0,78,1572	0/0:33,0:33:99:0,99,1976	1/1:0,11:7:18.06:293,18,0	0/0:25,0:25:75.24:0,75,1487	0/0:27,0:27:81.28:0,81,1645	0/0:25,0:25:75.26:0,75,1510	0/0:25,0:25:72.25:0,72,1442	0/0:29,0:29:87.30:0,87,1766	0/0:28,0:28:84.29:0,84,1681	1/1:1,19:20:24.45:708,24,0	1/1:0,24:24:66.23:1074,66,0	0/0:39,0:39:99:0,117,2316	0/0:31,0:31:90.31:0,90,1813	1/1:0,6:5:15.05:244,15,0	1/1:0,27:27:75.26:1210,75,0	1/1:0,15:15:39.13:613,39,0	0/0:24,0:24:69.24:0,69,1402	0/0:26,0:26:78.27:0,78,1583	0/0:33,0:32:96.33:0,96,1936	0/0:17,0:17:51.18:0,51,1036	0/0:29,0:29:87.30:0,87,1728	1/1:0,15:15:33.11:537,33,0	0/0:15,0:15:45.15:0,45,914
chr10	51024096	.	GA	G	5910.26	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=15.900;DP=714;FS=7.152;HRun=6;HaplotypeScore=117.2373;InbreedingCoeff=0.9977;MQ=70.71;MQ0=0;MQRankSum=-5.896;QD=26.27;ReadPosRankSum=2.903;VQSLOD=4.0667;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,22:22:51.13:535,51,0	0/0:10,0:10:29.63:0,30,239	0/0:18,0:16:26.79:0,27,298	0/0:19,0:19:44.38:0,44,415	0/0:26,0:26:66.21:0,66,867	1/1:8,22:30:78.17:810,78,0	1/1:8,16:24:66.16:691,66,0	0/0:32,0:32:86.68:0,87,819	0/0:19,0:19:57.17:0,57,731	0/0:35,0:34:90.26:0,90,1141	0/0:26,0:26:75.24:0,75,971	1/1:8,23:31:74.54:761,75,0	1/1:3,23:26:75.17:779,75,0	0/0:19,0:19:56.77:0,57,719	0/0:41,0:41:98.88:0,99,860	0/0:27,0:27:68.94:0,69,612	0/0:17,1:18:20.03:0,20,582	0/0:23,0:23:57.98:0,58,710	0/0:26,0:26:66.09:0,66,646	0/0:35,0:35:98.91:0,99,871	0/0:14,0:14:32.95:0,33,281	1/1:5,25:30:75.17:780,75,0	1/1:7,34:41:99:1024,99,0	1/1:4,17:21:51.11:530,51,0	0/0:29,0:29:78.20:0,78,978	0/0:26,1:27:37.39:0,37,823	0/0:32,0:32:90.85:0,91,679	0/0:13,0:13:19.05:0,19,345
chr10	51024103	.	CA	C	5513.25	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=16.036;DP=693;FS=0.986;HRun=10;HaplotypeScore=118.4118;InbreedingCoeff=0.9923;MQ=67.08;MQ0=0;MQRankSum=-1.943;QD=13.03;ReadPosRankSum=2.990;VQSLOD=4.4500;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,0:21:35.96:102,36,0	1/1:1,9:10:26.99:234,27,0	0/0:12,0:10:9.99:0,10,131	0/0:18,0:18:20.60:0,21,278	0/0:27,0:27:40.13:0,40,671	1/1:6,0:28:52.52:150,53,0	1/1:5,0:23:34.41:98,34,0	1/1:3,26:29:77.91:661,78,0	0/0:20,0:20:51.14:0,51,563	0/0:33,0:32:79.46:0,79,866	0/0:30,0:30:57.67:0,58,801	1/1:7,0:28:38.47:114,38,0	1/1:5,0:28:54.78:155,55,0	0/0:22,0:22:48.11:0,48,522	1/1:4,32:36:83.98:729,84,0	1/1:3,24:27:29.80:488,30,0	0/0:17,0:18:40.95:0,41,399	0/0:26,1:27:41.01:0,41,671	1/1:3,20:23:59.99:521,60,0	1/1:4,32:36:89.97:781,90,0	1/1:1,11:12:29.99:260,30,0	1/1:0,0:27:54.08:155,54,0	1/1:6,0:42:80.83:228,81,0	1/1:1,0:18:34.77:106,35,0	0/0:26,0:26:66.01:0,66,710	0/0:23,0:27:68.18:0,68,753	1/1:1,34:35:83.92:729,84,0	0/0:10,0:10:30.08:0,30,331
chr10	51024438	.	C	CT	5936.62	PASS	AB=0.629;AC=31;AF=0.554;AN=56;BaseQRankSum=-10.063;DP=617;FS=9.414;HRun=11;HaplotypeScore=68.5988;InbreedingCoeff=0.8782;MQ=75.56;MQ0=0;MQRankSum=-0.859;QD=15.50;ReadPosRankSum=1.841;VQSLOD=5.1913;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,23:33:6.57:358,7,0	1/1:2,9:11:20.99:201,21,0	0/0:11,0:10:10.97:0,11,76	0/0:16,0:15:21.32:0,21,155	0/0:32,0:33:73.46:0,73,542	1/1:5,22:27:60.11:603,60,0	1/1:6,22:28:20.36:372,20,0	1/1:12,28:40:46.30:788,46,0	0/0:24,0:24:62.69:0,63,477	0/0:25,0:27:65.24:0,65,493	0/0:17,1:19:16.42:0,16,300	1/1:10,17:27:18.24:290,18,0	0/1:9,13:22:59.79:304,0,60	0/0:15,0:15:32.84:0,33,253	1/1:4,19:24:18.68:356,19,0	1/1:10,14:24:12.80:298,13,0	0/0:17,0:17:38.76:0,39,289	0/0:11,0:12:22.94:0,23,168	1/1:6,8:14:7.52:207,8,0	1/1:7,21:28:22.74:405,23,0	1/1:1,8:9:15.03:152,15,0	1/1:8,11:20:12.67:296,13,0	1/1:5,27:32:35.69:517,36,0	1/1:2,13:16:12:336,12,0	0/0:19,0:19:53.79:0,54,417	0/0:31,0:32:79.62:0,80,595	1/1:6,22:28:29.97:454,30,0	0/0:8,0:8:20.91:0,21,160
chr10	51026638	.	CA	C	517.28	PASS	AB=0.816;AC=13;AF=0.232;AN=56;BaseQRankSum=2.565;DP=673;FS=4.544;HRun=16;HaplotypeScore=95.4606;InbreedingCoeff=0.0143;MQ=65.49;MQ0=9;MQRankSum=0.839;QD=1.97;ReadPosRankSum=4.265;VQSLOD=-0.2517;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:32:37.60:0,38,221	0/1:9,3:12:9.08:9,0,116	0/0:35,0:15:5.62:0,6,52	0/1:21,0:10:2.76:3,0,5	0/0:17,0:21:34.54:0,35,254	0/1:10,6:16:19.30:99,0,19	0/1:9,11:21:26.11:26,0,34	0/1:14,14:29:76.75:127,0,77	0/0:17,3:19:12.79:0,13,200	0/0:22,1:25:22.99:0,23,312	0/1:22,2:27:18.92:19,0,211	0/0:13,0:20:18.17:0,18,76	0/1:5,1:22:6.46:6,0,35	0/0:27,1:28:23.55:0,24,268	0/0:26,4:31:35.68:0,36,379	0/0:19,1:25:26.74:0,27,314	0/0:40,5:45:32.58:0,33,552	0/0:26,0:27:50.67:0,51,394	0/1:14,0:14:28.26:28,0,47	1/1:5,16:23:19.10:203,19,0	0/1:19,3:22:10.90:57,0,11	0/0:10,1:25:23.57:0,24,210	0/0:12,0:24:14.35:0,14,76	0/0:2,0:14:8.99:0,9,44	0/0:23,2:27:12.41:0,12,270	0/1:20,5:25:3.15:3,0,290	0/1:14,13:28:2.32:87,0,2	0/0:8,0:9:23.73:0,24,178
chr10	51027207	.	AGGAGAAGGGGAGGGGGATG	A	10583.03	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=12.315;DP=551;FS=13.082;HRun=0;HaplotypeScore=277.0199;InbreedingCoeff=0.9870;MQ=65.36;MQ0=2;MQRankSum=-10.847;QD=92.03;ReadPosRankSum=2.730;VQSLOD=3.3254;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:81.28:0,81,7120	1/1:1,5:6:12.04:635,12,0	0/0:26,0:22:41.61:0,42,2249	0/0:24,0:21:50.90:0,51,2228	0/0:19,0:19:54.17:0,54,4467	0/0:28,0:28:75.26:0,75,6377	0/0:23,0:23:66.23:0,66,5320	1/1:13,8:21:24.08:840,24,0	0/0:17,0:17:48.16:0,48,3864	0/0:22,0:22:63.22:0,63,5547	0/0:18,0:18:51.16:0,51,4425	0/0:20,0:20:48.16:0,48,4160	0/0:23,0:23:63.22:0,63,5115	0/0:19,0:19:51.17:0,51,4178	1/1:3,15:18:33.11:1746,33,0	1/1:2,16:18:39.13:2063,39,0	0/0:24,0:24:66.23:0,66,4942	0/0:29,0:29:75.26:0,75,6368	1/1:5,4:8:12.04:521,12,0	1/1:4,8:12:21.07:1042,21,0	1/1:3,6:9:18.06:879,18,0	0/0:14,0:14:42.14:0,42,3695	0/0:12,0:12:36.12:0,36,2950	0/0:30,0:30:87.30:0,87,7000	0/0:26,0:26:72.25:0,72,6081	0/0:24,0:24:66.23:0,66,5777	1/1:4,18:22:54.19:2857,54,0	0/0:9,0:9:27.09:0,27,2425
chr10	51027366	.	C	CA	3129.57	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-12.090;DP=547;FS=13.192;HRun=7;HaplotypeScore=52.1149;InbreedingCoeff=0.9953;MQ=64.37;MQ0=5;MQRankSum=0.401;QD=23.18;ReadPosRankSum=2.649;VQSLOD=2.6299;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,22:27:54.16:647,54,0	0/0:7,0:7:18.03:0,18,174	0/0:19,0:12:25.14:0,25,205	0/0:17,0:10:21.45:0,21,177	0/0:34,0:34:90.14:0,90,869	1/1:3,16:19:39.12:471,39,0	1/1:3,12:17:27.31:337,27,0	0/0:40,0:39:96.10:0,96,917	0/0:8,0:8:21.03:0,21,203	0/0:27,0:26:69.10:0,69,666	0/0:13,0:13:30.03:0,30,284	1/1:1,9:10:24.07:290,24,0	1/1:0,20:20:42.13:507,42,0	0/0:12,0:12:36.06:0,36,347	0/0:24,0:24:62.13:0,62,585	0/0:19,0:19:57.09:0,57,550	0/0:20,0:20:60.09:0,60,577	0/0:31,0:32:88.68:0,89,840	0/0:23,0:23:51.08:0,51,492	0/0:17,0:17:36.05:0,36,347	0/0:8,0:8:24.04:0,24,232	1/1:3,13:16:33.10:398,33,0	1/1:1,16:17:36.11:435,36,0	1/1:0,9:9:21.06:251,21,0	0/0:23,0:23:57.08:0,57,545	0/0:28,0:28:82.02:0,82,784	0/0:25,0:24:66.07:0,66,625	0/0:16,0:15:45.07:0,45,435
chr10	51031321	.	TTAGA	T	2717.09	PASS	AB=0.688;AC=40;AF=0.870;AN=46;BaseQRankSum=3.023;DP=610;FS=1.340;HRun=0;HaplotypeScore=122.1591;InbreedingCoeff=0.3790;MQ=61.36;MQ0=17;MQRankSum=0.484;QD=6.05;ReadPosRankSum=-0.803;VQSLOD=2.6204;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:23:3.35:17,3,0	1/1:7,0:7:3:28,3,0	./.	./.	1/1:24,9:31:20.99:251,21,0	1/1:16,0:24:3:28,3,0	./.	./.	1/1:15,0:16:3.01:34,3,0	1/1:21,0:33:27.03:254,27,0	0/0:17,0:20:5.73:0,6,177	1/1:10,0:22:24.03:224,24,0	1/1:19,0:28:9.01:84,9,0	1/1:8,12:20:14.88:224,15,0	1/1:16,0:16:12.02:124,12,0	1/1:27,0:27:9.96:109,10,0	1/1:14,16:29:18.06:269,18,0	./.	1/1:18,0:18:9.03:134,9,0	1/1:30,0:30:12.03:157,12,0	1/1:11,0:11:5.75:52,6,0	1/1:9,0:19:3:28,3,0	1/1:11,0:20:6.01:56,6,0	0/1:6,0:11:0:0,0,0	0/0:26,0:30:18.02:0,18,230	0/1:17,13:31:12.68:516,0,13	1/1:22,0:22:6.01:68,6,0	1/1:3,4:7:12.04:179,12,0
chr10	51034341	.	A	AT	4209.44	PASS	AB=1.000;AC=18;AF=0.321;AN=56;BaseQRankSum=-11.088;DP=650;FS=2.027;HRun=11;HaplotypeScore=75.5662;InbreedingCoeff=0.8138;MQ=71.15;MQ0=1;MQRankSum=-0.264;QD=17.76;ReadPosRankSum=-1.557;VQSLOD=4.0470;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,1:23:29.29:0,29,407	1/1:1,14:15:42.08:426,42,0	0/0:19,0:16:4.82:0,5,115	0/1:20,0:17:14.78:15,0,100	0/0:17,0:18:43.87:0,44,331	0/0:6,0:32:56.90:0,57,194	0/0:5,0:24:32.58:0,33,94	1/1:14,17:32:10.43:439,10,0	0/0:18,0:18:47.81:0,48,371	0/0:22,0:22:36.44:0,36,396	0/0:19,0:19:44.81:0,45,348	0/0:22,0:25:60.11:0,60,451	0/0:40,0:40:67.88:0,68,667	0/0:27,1:30:45.44:0,45,513	1/1:5,31:36:17.46:722,17,0	1/1:7,21:29:39.89:586,40,0	0/0:11,0:11:28.93:0,29,215	0/0:16,0:16:32.82:0,33,255	1/1:11,16:28:4.43:380,4,0	1/1:5,28:35:61.78:749,62,0	1/1:0,4:4:12.02:122,12,0	0/0:19,0:19:44.80:0,45,345	0/0:15,0:17:48.90:0,49,360	0/0:23,0:23:56.75:0,57,441	0/0:29,0:29:74.70:0,75,580	0/0:28,0:28:62.74:0,63,488	1/1:7,25:31:40.69:770,41,0	0/1:6,0:6:1.54:2,0,78
chr10	51036199	.	AATTATTATTATTATTATT	A	2006.90	PASS	AB=0.815;AC=14;AF=0.269;AN=52;BaseQRankSum=3.650;DP=241;FS=9.796;HRun=0;HaplotypeScore=120.1404;InbreedingCoeff=0.4665;MQ=67.50;MQ0=1;MQRankSum=-1.349;QD=18.93;ReadPosRankSum=-1.926;VQSLOD=1.5482;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:6:8.53:0,9,73	1/1:4,2:6:3.01:146,3,0	./.	./.	0/0:8,0:8:6.02:0,6,351	0/1:10,0:12:4.84:5,0,118	0/0:8,0:8:5.87:0,6,35	0/1:24,0:33:99:170,0,175	0/0:6,0:6:9.03:0,9,521	0/0:4,0:4:3:0,3,29	0/0:6,0:6:18.06:0,18,790	0/0:9,0:9:17.53:0,18,322	0/0:5,0:5:3.01:0,3,67	0/0:4,0:4:6.02:0,6,239	0/0:1,0:1:2.92:0,3,17	1/1:8,2:10:6.02:292,6,0	0/0:13,0:13:21.07:0,21,1300	0/0:13,0:13:33.11:0,33,1528	1/1:10,4:14:12.02:395,12,0	1/1:4,5:9:9:247,9,0	1/1:4,0:4:3.01:33,3,0	0/0:2,0:2:6.02:0,6,139	0/0:7,0:7:3.01:0,3,83	0/0:1,0:1:2.97:0,3,20	0/0:9,0:9:9.02:0,9,497	0/0:12,0:12:6.02:0,6,293	1/1:7,10:17:18.06:873,18,0	0/0:12,0:12:24.08:0,24,1133
chr10	51036237	.	TTATTATTAG	T	1267.25	PASS	AB=1.000;AC=21;AF=0.389;AN=54;BaseQRankSum=-0.072;DP=223;FS=11.454;HRun=0;HaplotypeScore=83.1305;InbreedingCoeff=0.1260;MQ=54.15;MQ0=5;MQRankSum=-3.228;QD=9.39;ReadPosRankSum=2.059;VQSLOD=0.9432;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:6,0:6:31.48:31,0,88	1/1:2,0:2:3.01:46,3,0	0/0:4,0:2:5.99:0,6,50	0/0:3,0:2:5.93:0,6,40	0/0:7,0:7:20.22:0,20,233	0/0:7,0:7:13.11:0,13,114	0/0:4,0:4:3.83:0,4,20	0/1:29,0:24:3.23:226,0,3	0/0:8,0:8:6.02:0,6,228	0/0:6,0:6:17.88:0,18,140	0/1:11,0:11:25.93:26,0,218	1/1:7,0:7:19.24:269,19,0	1/1:0,5:5:2.82:87,3,0	0/0:10,0:10:29.98:0,30,306	1/1:5,0:5:11.97:100,12,0	0/1:7,0:7:71.62:72,0,97	0/0:18,0:18:50.96:0,51,756	0/0:13,0:13:23.95:0,24,389	0/1:8,0:7:35.98:105,0,36	0/1:14,0:14:7.20:7,0,211	0/0:3,0:3:4.84:0,5,40	1/1:0,3:3:3.01:68,3,0	1/1:0,6:6:2.73:73,3,0	./.	0/0:4,0:4:12.04:0,12,375	0/1:6,0:6:33.25:33,0,185	0/1:15,0:15:80.88:241,0,81	0/1:11,0:11:48.48:48,0,146
chr10	51036243	.	T	TTAG	1628.35	PASS	AB=1.000;AC=24;AF=0.444;AN=54;BaseQRankSum=-0.565;DP=244;FS=10.203;HRun=0;HaplotypeScore=63.4777;InbreedingCoeff=0.6591;MQ=54.48;MQ0=7;MQRankSum=2.128;QD=14.16;ReadPosRankSum=0.406;VQSLOD=2.2195;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:6:8.96:0,9,71	0/0:2,0:2:3.01:0,3,30	0/0:6,0:2:6.01:0,6,57	0/1:4,0:2:1.09:1,0,7	1/1:0,8:8:20.66:167,21,0	1/1:8,0:8:9.91:100,10,0	1/1:4,0:4:2.94:18,3,0	0/0:35,0:29:41.91:0,42,362	1/1:0,10:10:6.02:118,6,0	1/1:7,0:7:17.91:142,18,0	1/1:11,0:11:20.76:245,21,0	0/0:9,0:9:12.41:0,12,95	0/0:5,0:5:0.89:0,1,2	1/1:12,0:12:32.86:265,33,0	0/0:6,0:6:14.96:0,15,124	0/0:7,0:7:20.95:0,21,184	1/1:19,0:19:35.87:316,36,0	1/1:13,0:14:20.91:260,21,0	0/0:8,0:7:8.92:0,9,69	0/0:15,0:15:41.80:0,42,328	0/0:4,0:4:11.86:0,12,84	0/0:3,0:3:0:0,0,0	0/0:6,0:6:2.97:0,3,21	./.	0/1:4,0:4:16.14:38,0,16	1/1:7,0:7:3.24:97,3,0	0/0:16,0:16:34.15:0,34,248	1/1:7,0:7:5.98:46,6,0
chr10	51037532	.	AT	A	4733.09	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=12.246;DP=635;FS=1.082;HRun=7;HaplotypeScore=61.9862;InbreedingCoeff=0.9880;MQ=61.89;MQ0=0;MQRankSum=-0.115;QD=28.34;ReadPosRankSum=-0.693;VQSLOD=5.1879;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:96.31:0,96,1205	1/1:0,6:6:18.04:184,18,0	0/0:10,0:10:27.07:0,27,312	0/0:6,0:7:8.99:0,9,169	0/0:31,0:30:90.25:0,90,1115	0/0:20,0:20:57.17:0,57,704	0/0:20,0:20:57.18:0,57,716	1/1:2,19:21:57.11:573,57,0	0/0:22,0:22:66.20:0,66,818	0/0:32,0:32:93.28:0,93,1145	0/0:23,0:23:63.19:0,63,780	0/0:24,0:24:69.18:0,69,829	0/0:26,0:26:78.22:0,78,953	0/0:22,0:22:63.19:0,63,779	1/1:0,18:18:48.11:490,48,0	1/1:0,17:17:44.94:459,45,0	0/0:17,0:17:48.15:0,48,603	0/0:21,0:21:63.19:0,63,780	1/1:1,27:28:81.17:820,81,0	1/1:0,35:35:99:1045,105,0	1/1:1,13:14:36.08:367,36,0	0/0:36,0:36:99:0,105,1321	0/0:29,0:29:87.27:0,87,1083	0/0:19,0:19:57.14:0,57,699	0/0:33,0:33:99:0,99,1217	0/0:34,0:34:93.30:0,93,1170	1/1:2,26:28:78.17:796,78,0	0/0:7,0:7:21.07:0,21,264
chr10	51039046	.	TG	T	4556.69	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=4.639;DP=657;FS=17.921;HRun=9;HaplotypeScore=80.4854;InbreedingCoeff=0.9352;MQ=81.71;MQ0=2;MQRankSum=-2.342;QD=19.47;ReadPosRankSum=2.983;VQSLOD=3.8087;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:18:23.27:0,23,166	1/1:1,12:13:36.02:329,36,0	0/0:22,0:22:48:0,48,482	0/1:22,0:22:2.04:2,0,324	0/0:16,0:16:39.12:0,39,450	0/0:23,0:23:60.17:0,60,683	0/0:17,0:17:11.68:0,12,387	1/1:5,19:25:53.04:473,53,0	0/0:21,1:22:23.67:0,24,517	0/0:25,0:25:57.17:0,57,656	0/0:17,0:17:39.11:0,39,442	0/0:15,0:29:28.67:0,29,160	0/0:11,0:32:42.61:0,43,216	0/0:25,0:24:57.15:0,57,647	1/1:5,29:34:75.02:686,75,0	1/1:2,26:28:72.03:659,72,0	0/0:25,0:25:48.39:0,48,735	0/0:14,0:14:36.09:0,36,402	1/1:2,13:15:39.01:357,39,0	1/1:6,34:40:83.96:760,84,0	1/1:3,18:21:45.02:412,45,0	0/0:8,0:23:25.69:0,26,141	0/0:12,0:24:14.03:0,14,71	0/0:4,0:20:15.13:0,15,150	0/0:26,0:26:61.30:0,61,714	0/0:27,0:27:69.21:0,69,796	1/1:4,32:36:96.05:879,96,0	0/0:16,0:17:45.13:0,45,519
chr10	51043649	.	T	TTATC	4553.55	PASS	AC=20;AF=0.417;AN=48;BaseQRankSum=-7.494;DP=614;FS=21.563;HRun=0;HaplotypeScore=104.7872;InbreedingCoeff=0.8879;MQ=67.90;MQ0=6;MQRankSum=2.785;QD=18.44;ReadPosRankSum=-4.008;VQSLOD=2.4422;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:20:15.02:0,15,140	0/0:13,0:14:24.06:0,24,331	./.	./.	0/0:21,0:21:42.13:0,42,621	1/1:13,0:26:5.98:53,6,0	1/1:13,0:12:0.89:3,1,0	1/1:35,0:35:8.48:102,8,0	0/0:22,0:22:27.09:0,27,412	1/1:14,12:26:36.10:690,36,0	1/1:9,10:19:15.05:352,15,0	0/0:9,0:26:18.01:0,18,163	0/0:10,0:19:14.73:0,15,131	0/0:27,0:27:42.08:0,42,577	0/0:34,0:34:48.14:0,48,696	0/0:18,0:18:20.87:0,21,299	0/0:22,0:24:31.15:0,31,633	0/0:16,0:16:27.07:0,27,386	1/1:8,0:16:22.53:242,23,0	1/1:9,13:22:35.99:740,36,0	./.	0/0:9,0:13:3:0,3,28	0/0:10,0:23:8.88:0,9,84	./.	0/0:15,0:15:30.09:0,30,436	1/1:17,16:35:13.77:1106,14,0	1/1:19,21:38:27.09:634,27,0	1/1:4,10:14:27.09:633,27,0
chr10	51043825	.	CT	C	3735.23	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=10.044;DP=524;FS=2.236;HRun=7;HaplotypeScore=54.0175;InbreedingCoeff=0.8890;MQ=72.41;MQ0=1;MQRankSum=0.465;QD=21.34;ReadPosRankSum=-0.543;VQSLOD=2.8990;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:66.64:0,67,799	1/1:0,5:5:15.03:153,15,0	0/0:14,0:11:16.12:0,16,125	0/1:12,0:11:16.36:16,0,51	0/0:31,0:31:84.14:0,84,937	0/0:20,0:20:57.11:0,57,658	0/0:6,0:6:15.02:0,15,162	1/1:7,22:29:63.03:598,63,0	0/0:10,0:10:27.07:0,27,326	0/0:30,0:30:64.65:0,65,724	0/0:26,0:26:72.20:0,72,867	0/0:16,0:16:42.12:0,42,515	0/0:27,0:27:75.21:0,75,907	0/0:20,0:20:54.16:0,54,664	1/1:3,20:23:45.08:451,45,0	1/1:2,20:22:42.09:428,42,0	0/0:21,0:21:63.16:0,63,763	0/0:13,0:13:33.05:0,33,383	1/1:2,19:21:51.01:490,51,0	1/1:1,23:24:68.91:652,69,0	1/1:1,4:5:9.02:92,9,0	0/0:8,0:8:21.07:0,21,264	0/0:19,0:19:45.13:0,45,541	0/0:4,0:4:8.79:0,9,99	0/0:21,0:21:60.18:0,60,734	0/0:29,0:29:72.13:0,72,842	1/1:8,24:32:87.12:854,87,0	0/0:9,0:9:18.06:0,18,226
chr10	51047291	.	GT	G	2946.45	PASS	AB=0.792;AC=17;AF=0.304;AN=56;BaseQRankSum=3.794;DP=643;FS=13.896;HRun=11;HaplotypeScore=80.3104;InbreedingCoeff=0.7851;MQ=67.59;MQ0=1;MQRankSum=-1.740;QD=12.92;ReadPosRankSum=-0.056;VQSLOD=1.9591;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:30:45.87:0,46,245	1/1:2,7:9:20.96:172,21,0	0/0:14,0:13:22.60:0,23,201	0/0:16,0:13:14.98:0,15,134	0/1:20,2:22:1.17:1,0,394	0/0:21,0:21:51.12:0,51,537	0/0:12,0:13:26.90:0,27,270	1/1:4,22:26:62.87:514,63,0	0/0:21,0:21:42.07:0,42,425	0/0:41,0:41:87.17:0,87,891	0/0:33,0:34:92.90:0,93,912	0/0:4,0:29:45.62:0,46,229	0/0:7,0:27:57.26:0,57,307	0/0:30,1:31:78.12:0,78,804	1/1:1,16:17:41.95:345,42,0	0/1:8,24:32:7.19:362,0,7	0/0:20,0:20:54.11:0,54,560	0/0:16,0:16:11.48:0,11,318	1/1:8,17:25:44.89:365,45,0	1/1:6,30:37:79.79:636,80,0	1/1:3,15:18:10.93:246,11,0	0/0:3,0:13:34.68:0,35,205	0/0:3,0:21:40.07:0,40,212	0/0:5,0:12:22.93:0,23,132	0/0:25,0:27:68.99:0,69,705	0/0:29,0:29:72.14:0,72,739	1/1:2,24:26:59.60:492,60,0	0/1:13,2:16:10.35:10,0,295
chr10	51048336	.	CTGTGTGTG	C	1273.20	PASS	AB=0.958;AC=10;AF=0.192;AN=52;BaseQRankSum=1.522;DP=536;FS=2.995;HRun=0;HaplotypeScore=121.9488;InbreedingCoeff=0.4635;MQ=43.92;MQ0=35;MQRankSum=0.915;QD=9.16;ReadPosRankSum=0.622;VQSLOD=2.4070;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:32,0:27:9.22:474,0,9	./.	0/0:7,0:4:12.04:0,12,328	0/0:2,0:1:3:0,3,27	0/0:27,0:25:37.94:0,38,1146	0/1:21,0:17:1.65:93,0,2	1/1:10,11:20:1.92:68,2,0	0/0:26,0:24:42.14:0,42,1133	0/0:25,0:23:42.14:0,42,1257	0/0:23,0:22:27.52:0,28,598	0/0:18,0:17:27.09:0,27,803	0/1:16,3:20:1.80:310,0,2	1/1:3,11:15:9.03:208,9,0	0/0:16,0:14:24.08:0,24,668	0/0:24,0:22:6.02:0,6,159	0/0:21,0:21:18.52:0,19,380	0/0:32,0:32:58.04:0,58,1615	0/0:29,0:29:42.14:0,42,1379	0/0:19,0:17:18.06:0,18,460	0/0:15,0:15:6.02:0,6,192	0/0:20,0:14:6:0,6,123	./.	1/1:15,2:16:12.04:252,12,0	0/0:10,6:15:5.85:0,6,34	0/0:17,0:16:19.57:0,20,383	0/0:23,0:22:59:0,59,1551	0/0:20,0:18:27.07:0,27,687	0/1:13,0:11:9.98:10,0,642
chr10	51049168	.	TTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	T	1243.37	PASS	AB=1.000;AC=8;AF=0.143;AN=56;BaseQRankSum=2.127;DP=609;FS=6.672;HRun=0;HaplotypeScore=387.3605;InbreedingCoeff=0.5375;MQ=72.44;MQ0=8;MQRankSum=-0.515;QD=10.19;ReadPosRankSum=0.665;VQSLOD=0.6523;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:32:33.08:0,33,2498	0/0:5,0:5:3.01:0,3,224	0/0:38,0:31:9.50:0,10,261	0/0:33,0:27:23.29:0,23,681	0/0:12,0:12:18.04:0,18,1494	0/0:15,0:16:12.04:0,12,964	0/0:19,0:23:25.02:0,25,1477	0/1:28,0:28:48.15:48,0,148	0/0:21,0:19:24.55:0,25,2463	0/0:22,0:21:29.83:0,30,1909	0/0:9,0:9:3.48:0,3,169	0/0:30,0:30:49.08:0,49,4774	0/0:19,0:19:27.56:0,28,2245	0/0:26,0:26:32.50:0,32,2481	0/0:24,0:24:27.09:0,27,2110	0/0:26,0:26:24.63:0,25,2382	0/0:19,0:19:39.09:0,39,3661	0/0:12,0:17:21.07:0,21,1542	0/1:15,0:15:56.53:57,0,72	1/1:20,8:28:8.52:479,9,0	1/1:33,0:32:8.60:115,9,0	0/0:17,0:17:27.09:0,27,1547	0/0:13,0:12:6.02:0,6,476	0/0:28,0:28:30.10:0,30,2714	0/0:17,0:18:21.05:0,21,2131	0/0:27,0:27:42.14:0,42,2989	1/1:11,7:17:9.91:684,10,0	0/0:10,0:9:18.06:0,18,1865
chr10	51055323	.	C	CTG	526.16	PASS	AB=0.898;AC=18;AF=0.346;AN=52;BaseQRankSum=1.706;DP=719;FS=10.946;HRun=0;HaplotypeScore=120.9852;InbreedingCoeff=0.3796;MQ=66.80;MQ0=12;MQRankSum=1.114;QD=1.60;ReadPosRankSum=0.891;VQSLOD=1.9232;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:45,0:45:26:215,26,0	1/1:14,0:14:5.99:49,6,0	./.	./.	0/0:18,0:18:8.67:0,9,66	0/1:15,6:22:35.14:35,0,47	1/1:37,0:35:5.17:67,5,0	0/1:23,0:22:1.45:3,0,1	0/0:15,0:15:8.94:0,9,87	0/0:20,0:22:8.64:0,9,51	0/0:14,0:14:5.96:0,6,49	0/0:26,0:26:19.43:0,19,181	0/0:20,0:20:8.15:0,8,95	0/0:25,0:25:14.59:0,15,104	1/1:31,0:30:11.96:94,12,0	1/1:26,0:30:3.29:27,3,0	0/0:41,0:43:37.16:0,37,333	0/0:26,0:26:6.42:0,6,192	0/1:25,0:23:0.53:1,0,21	0/1:14,1:16:35.15:35,0,55	1/1:46,1:47:7.70:121,8,0	0/0:11,0:14:2.84:0,3,14	0/0:22,0:22:8.93:0,9,88	0/0:20,0:22:11.98:0,12,111	0/0:16,0:16:2.83:0,3,9	0/1:22,0:22:2:2,0,89	0/1:11,6:17:23.41:36,0,23	0/0:13,0:13:11.79:0,12,86
chr10	51057346	.	T	TA	3629.91	PASS	AB=0.588;AC=21;AF=0.375;AN=56;BaseQRankSum=2.582;DP=485;FS=8.461;HRun=11;HaplotypeScore=68.6617;InbreedingCoeff=0.8845;MQ=69.52;MQ0=0;MQRankSum=-0.108;QD=18.33;ReadPosRankSum=0.591;VQSLOD=4.5838;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,22:32:60.02:595,60,0	0/0:9,0:9:26.90:0,27,209	0/0:19,0:14:7.95:0,8,69	0/0:27,0:16:15.04:0,15,119	0/0:25,0:27:64.76:0,65,491	0/0:0,0:24:42.78:0,43,124	0/0:0,0:7:12.22:0,12,35	1/1:18,17:35:11.77:458,12,0	0/0:11,0:13:28.91:0,29,213	0/0:22,0:24:57.69:0,58,420	0/0:14,0:15:40.88:0,41,308	1/1:4,12:16:6.82:251,7,0	1/1:5,9:14:21.04:213,21,0	0/0:9,0:9:20.91:0,21,163	0/0:15,0:15:23.84:0,24,185	0/0:10,0:10:29.89:0,30,232	0/0:20,0:20:41.81:0,42,325	0/0:25,0:26:52.80:0,53,401	1/1:1,18:19:54.10:543,54,0	1/1:5,14:19:39.04:385,39,0	1/1:0,8:8:21.04:213,21,0	1/1:3,8:11:20.94:198,21,0	1/1:5,12:17:27.52:275,28,0	0/1:3,7:10:28.44:104,0,28	0/0:17,0:19:45.91:0,46,337	0/0:16,0:17:37.88:0,38,284	1/1:1,15:16:39.08:396,39,0	0/0:6,0:6:17.93:0,18,139
chr10	51060377	.	TCA	T	1395.62	PASS	AB=0.852;AC=15;AF=0.278;AN=54;BaseQRankSum=3.971;DP=575;FS=7.791;HRun=0;HaplotypeScore=80.2740;InbreedingCoeff=0.3975;MQ=58.52;MQ0=4;MQRankSum=2.746;QD=6.46;ReadPosRankSum=1.677;VQSLOD=2.3070;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:20,9:29:6.02:66,6,0	0/0:8,0:14:18.04:0,18,228	0/0:18,0:11:3.01:0,3,37	./.	0/0:25,0:25:42.10:0,42,581	0/0:17,0:17:6:0,6,61	0/0:15,0:15:3:0,3,28	0/0:30,0:29:26.79:0,27,215	0/1:19,4:23:61.18:61,0,352	0/0:20,2:22:3.44:0,3,418	0/0:26,1:27:11.92:0,12,508	1/1:5,9:17:32.59:307,33,0	1/1:8,16:24:29.98:332,30,0	0/0:15,0:15:14.88:0,15,194	0/0:12,0:22:20.98:0,21,213	0/0:12,0:24:27.02:0,27,309	0/1:20,3:24:38.46:38,0,378	0/0:11,0:11:11.09:0,11,258	0/0:19,0:19:23.98:0,24,273	0/0:21,0:21:14.36:0,14,111	0/0:10,0:10:6.02:0,6,85	1/1:7,9:16:15.04:164,15,0	1/1:4,20:23:27.07:298,27,0	0/1:16,15:30:57.22:265,0,57	0/1:21,0:21:19.35:19,0,494	0/0:21,0:21:11.61:0,12,472	0/0:28,0:27:27.55:0,28,208	0/1:6,1:6:18.18:18,0,116
chr10	51062383	.	ATGTGTGTG	A	2067.75	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=4.034;DP=646;FS=5.840;HRun=0;HaplotypeScore=170.2264;InbreedingCoeff=0.8665;MQ=55.63;MQ0=20;MQRankSum=-7.602;QD=16.54;ReadPosRankSum=4.312;VQSLOD=2.2406;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:8,6:14:3.01:76,3,0	0/0:4,0:8:21.06:0,21,401	0/0:31,0:16:3.01:0,3,45	0/0:34,0:16:9.03:0,9,138	0/0:32,0:34:78.08:0,78,2345	0/0:15,0:29:33.06:0,33,620	0/0:13,0:25:27.07:0,27,538	0/0:35,0:33:33.05:0,33,591	0/0:16,0:18:30.10:0,30,895	0/0:25,0:25:60.21:0,60,1981	0/0:24,0:26:48.16:0,48,1507	1/1:10,10:20:12.04:305,12,0	1/1:6,13:20:23.97:563,24,0	0/0:20,0:21:33.11:0,33,1219	0/0:19,0:19:33.11:0,33,1202	0/0:7,0:19:39.13:0,39,831	0/0:22,0:23:41.34:0,41,1383	0/0:16,0:16:35.15:0,35,971	0/0:22,0:19:20.28:0,20,506	0/0:13,0:31:23.10:0,23,552	0/0:30,0:26:18.92:0,19,367	1/1:8,17:25:29.85:763,30,0	1/1:12,12:27:20.93:453,21,0	1/1:10,9:19:3.01:76,3,0	0/0:19,0:21:42.14:0,42,1556	0/0:12,0:12:33.10:0,33,1018	0/0:9,0:22:28.65:0,29,851	0/0:12,0:10:18.06:0,18,533
chr10	51063161	.	T	TTA	2159.11	PASS	AB=1.000;AC=27;AF=0.519;AN=52;BaseQRankSum=-1.085;DP=272;FS=2.675;HRun=0;HaplotypeScore=43.0926;InbreedingCoeff=0.7949;MQ=83.13;MQ0=0;MQRankSum=-0.849;QD=17.14;ReadPosRankSum=0.400;VQSLOD=2.9888;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,8:9:18.06:301,18,0	1/1:0,3:3:6.02:100,6,0	0/0:6,0:5:8.39:0,8,82	0/0:18,0:15:17.38:0,17,145	0/0:8,0:8:18.06:0,18,228	1/1:3,9:12:18.06:301,18,0	1/1:0,4:4:9.03:150,9,0	1/1:12,0:44:41.54:505,42,0	0/0:13,0:13:33.11:0,33,419	0/0:5,0:5:15.05:0,15,190	0/0:10,0:10:18.06:0,18,229	1/1:5,2:8:9.03:147,9,0	1/1:0,3:3:9.03:151,9,0	0/0:4,0:4:9.03:0,9,114	1/1:2,5:7:12.04:201,12,0	1/1:2,4:6:9.03:151,9,0	0/0:19,0:18:54.12:0,54,652	0/0:7,0:7:18.06:0,18,229	0/1:11,0:10:7.52:20,0,8	1/1:1,1:4:6:53,6,0	./.	./.	1/1:1,3:4:9.03:151,9,0	1/1:1,2:3:3.01:50,3,0	0/0:14,0:14:39.12:0,39,496	0/0:17,0:17:48.15:0,48,611	1/1:1,0:8:9:79,9,0	0/0:20,0:20:60.19:0,60,764
chr10	51063846	.	GTC	G	801.26	PASS	AB=0.996;AC=32;AF=0.667;AN=48;BaseQRankSum=-1.548;DP=729;FS=2.327;HRun=0;HaplotypeScore=138.1862;InbreedingCoeff=0.1691;MQ=67.72;MQ0=33;MQRankSum=1.350;QD=1.75;ReadPosRankSum=0.177;VQSLOD=2.1526;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:32,1:32:23.84:26,0,24	1/1:8,2:10:3:32,3,0	./.	./.	1/1:24,0:24:5.91:47,6,0	1/1:15,0:15:1.25:3,1,0	0/1:24,0:24:10.29:37,0,10	./.	1/1:26,3:28:2.28:31,2,0	0/1:26,0:26:3.92:4,0,22	1/1:20,0:20:2.04:6,2,0	1/1:15,5:21:17.88:174,18,0	1/1:22,4:26:4.74:128,5,0	1/1:17,6:22:3:32,3,0	0/0:30,1:30:15.01:0,15,134	0/0:30,1:32:0.88:0,1,97	1/1:17,1:19:5.85:46,6,0	0/1:14,0:14:24.22:24,0,30	0/0:20,0:18:3:0,3,28	0/1:29,0:28:0:0,0,0	1/1:23,1:22:3.01:32,3,0	0/0:14,0:14:5.23:0,5,37	1/1:20,3:20:5.76:64,6,0	1/1:16,9:26:23.89:238,24,0	0/1:17,0:17:2.02:2,0,20	0/1:27,0:26:5.55:8,0,6	0/1:26,0:26:0:0,0,0	./.
chr10	51063848	.	C	CTG	3202.76	PASS	AB=1.000;AC=27;AF=0.482;AN=56;BaseQRankSum=9.803;DP=741;FS=0.385;HRun=0;HaplotypeScore=147.3618;InbreedingCoeff=0.8418;MQ=65.29;MQ0=34;MQRankSum=-2.460;QD=9.20;ReadPosRankSum=-0.316;VQSLOD=3.2976;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:32,1:32:48.49:394,48,0	1/1:11,0:11:15.45:126,15,0	0/0:44,0:16:22.15:0,22,211	0/0:81,0:37:38.39:0,38,340	0/0:26,0:26:10.53:0,11,370	0/0:16,0:16:42.75:0,43,340	0/0:25,0:25:34.10:0,34,415	1/1:40,0:36:66.64:446,67,0	0/0:31,0:30:66.36:0,66,543	0/0:25,0:25:50.07:0,50,503	0/0:21,0:21:40.96:0,41,366	1/1:22,0:22:45.24:362,45,0	1/1:30,0:27:12.50:220,13,0	0/0:25,0:24:41.39:0,41,328	1/1:30,0:29:8.40:237,8,0	1/1:32,0:32:20.17:408,20,0	0/0:21,0:21:38.85:0,39,307	0/1:13,0:13:39.61:40,0,104	1/1:20,0:18:37.38:276,37,0	1/1:7,23:29:2.78:19,3,0	1/1:23,0:21:11.94:100,12,0	1/1:15,0:15:9.53:134,10,0	1/1:21,2:20:34.68:301,35,0	1/1:26,0:26:49.73:357,50,0	0/0:20,0:20:27.69:0,28,254	0/0:26,0:24:51.88:0,52,498	0/0:4,22:26:0:0,0,0	0/0:6,0:6:11.97:0,12,99
chr10	51064900	.	GGAGAGA	G	91.73	PASS	AB=0.960;AC=8;AF=0.167;AN=48;BaseQRankSum=2.990;DP=587;FS=8.283;HRun=0;HaplotypeScore=134.1609;InbreedingCoeff=0.2636;MQ=65.30;MQ0=9;MQRankSum=-2.381;QD=0.71;ReadPosRankSum=0.143;VQSLOD=2.0950;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:29.69:0,30,513	0/0:11,0:11:3.01:0,3,57	./.	./.	0/0:16,0:16:11.23:0,11,135	./.	1/1:20,0:22:3.01:50,3,0	0/0:28,0:28:3.83:0,4,20	0/0:18,0:18:18.04:0,18,336	0/0:15,0:15:11.98:0,12,146	0/0:14,0:13:3:0,3,25	0/1:21,4:25:38.90:124,0,39	0/1:16,0:16:7.26:7,0,8	0/0:23,0:23:15.23:0,15,309	0/0:24,0:24:8.97:0,9,71	0/0:21,0:21:8.98:0,9,103	0/0:24,0:24:32.85:0,33,500	0/0:25,0:22:35.99:0,36,576	1/1:21,0:20:1.87:6,2,0	0/0:18,0:18:0.47:0,0,1	0/0:25,0:24:8.97:0,9,90	0/1:17,0:17:0:0,0,0	./.	0/1:28,0:28:6.97:7,0,40	0/0:18,0:17:8.61:0,9,92	0/0:18,0:18:17.06:0,17,227	0/0:20,0:21:9.50:0,10,182	0/0:15,0:15:17.97:0,18,164
chr10	51064947	.	G	GAC	3139.10	PASS	AB=0.917;AC=23;AF=0.411;AN=56;BaseQRankSum=13.204;DP=684;FS=9.613;HRun=0;HaplotypeScore=125.9474;InbreedingCoeff=0.6345;MQ=55.72;MQ0=20;MQRankSum=2.678;QD=9.66;ReadPosRankSum=5.555;VQSLOD=2.2493;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:42,0:42:27.97:515,28,0	1/1:10,0:10:11.62:93,12,0	0/0:23,0:11:20.13:0,20,212	0/0:43,0:22:23.33:0,23,345	0/0:25,0:25:36.42:0,36,402	0/0:10,0:9:18.43:0,18,146	0/0:25,0:24:23.87:0,24,394	0/1:30,0:29:31.13:399,0,31	0/0:23,0:22:56.60:0,57,490	0/0:22,0:21:53.19:0,53,427	0/0:18,0:17:26.96:0,27,223	0/1:21,0:20:5.26:202,0,5	1/1:18,0:18:1.90:211,2,0	0/0:36,0:36:80.19:0,80,701	0/1:26,0:27:10.97:148,0,11	1/1:33,0:33:24.29:317,24,0	0/0:37,0:37:75.42:0,75,712	0/0:33,0:30:83.80:0,84,686	0/1:17,0:17:4.54:122,0,5	1/1:14,0:14:24.98:215,25,0	0/1:9,21:30:42.86:43,0,54	1/1:14,0:12:26.96:222,27,0	1/1:15,0:15:17.96:145,18,0	1/1:28,0:28:61.93:481,62,0	0/0:25,0:23:35.77:0,36,297	0/0:27,0:27:44.29:0,44,541	1/1:25,0:25:23.28:232,23,0	0/0:12,0:11:25.58:0,26,220
chr10	51067518	.	G	GA	2792.82	PASS	AB=0.891;AC=28;AF=0.500;AN=56;BaseQRankSum=-1.493;DP=538;FS=0.000;HRun=13;HaplotypeScore=91.0544;InbreedingCoeff=0.7921;MQ=70.69;MQ0=0;MQRankSum=0.664;QD=9.04;ReadPosRankSum=-4.879;VQSLOD=1.6557;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,0:21:10.07:47,10,0	0/0:3,0:12:20.53:0,21,60	0/1:21,0:17:24.85:25,0,59	0/0:7,0:6:6.80:0,7,32	0/0:34,0:36:13.33:0,13,269	1/1:3,17:25:43:384,43,0	1/1:4,16:21:26.18:269,26,0	1/1:11,16:28:24.81:377,25,0	0/0:15,0:16:22.73:0,23,150	0/0:15,0:15:19.44:0,19,127	0/1:13,5:18:21.26:21,0,78	1/1:3,0:16:17.25:93,17,0	1/1:7,0:18:26.22:135,26,0	0/0:16,0:16:13.26:0,13,185	0/0:7,0:18:22.14:0,22,64	0/0:6,0:23:31.44:0,31,103	0/0:11,0:12:28.75:0,29,188	0/0:17,1:18:10.76:0,11,219	1/1:7,10:18:16.22:261,16,0	1/1:8,26:36:34.72:525,35,0	1/1:3,3:7:11.97:103,12,0	1/1:6,0:16:29.98:165,30,0	1/1:9,1:21:20.23:98,20,0	1/1:5,1:13:14.10:77,14,0	0/0:21,0:21:13.70:0,14,219	0/0:16,0:19:13.48:0,13,137	1/1:14,14:29:5.60:433,6,0	0/0:13,0:15:33.70:0,34,212
chr10	51067870	.	A	AT	2114.30	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-9.552;DP=660;FS=0.000;HRun=4;HaplotypeScore=67.6975;InbreedingCoeff=0.9984;MQ=84.02;MQ0=0;MQRankSum=-1.179;QD=33.56;ReadPosRankSum=1.098;VQSLOD=4.1882;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,165,1818	1/1:0,13:13:33.11:451,33,0	0/0:19,0:19:45.12:0,45,505	0/0:32,0:32:72.18:0,72,795	0/0:32,0:32:90.26:0,90,1021	0/0:16,0:16:45.13:0,45,510	0/0:19,0:19:48.14:0,48,544	0/0:29,0:29:75.20:0,75,843	0/0:18,0:18:48.08:0,48,529	0/0:28,0:28:81.22:0,81,912	0/0:14,0:14:39.11:0,39,442	0/0:34,0:34:96.27:0,96,1089	0/0:17,0:17:42.12:0,42,476	0/0:26,0:26:78.17:0,78,847	1/1:1,23:24:66.22:903,66,0	1/1:3,23:26:66.22:903,66,0	0/0:23,0:23:66.16:0,66,736	0/0:28,0:28:84.15:0,84,914	0/0:25,0:25:66.12:0,66,708	0/0:25,0:25:69.17:0,69,764	0/0:23,0:23:66.17:0,66,739	0/0:15,0:15:36.05:0,36,379	0/0:21,0:21:57.01:0,57,627	0/0:24,0:24:63.18:0,63,715	0/0:24,0:24:66.16:0,66,729	0/0:21,0:21:54.12:0,54,593	0/0:22,0:22:60.15:0,60,662	0/0:7,0:7:21.06:0,21,237
chr10	51068486	.	A	AGGG	772.31	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=2.912;DP=583;FS=0.912;HRun=8;HaplotypeScore=83.1754;InbreedingCoeff=0.9890;MQ=75.06;MQ0=0;MQRankSum=-5.529;QD=20.87;ReadPosRankSum=-1.764;VQSLOD=0.8337;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:93.28:0,93,1200	0/0:8,0:8:18.06:0,18,237	0/0:17,0:17:39.11:0,39,507	0/0:10,0:10:26.75:0,27,323	0/0:19,0:19:51.16:0,51,669	1/1:11,0:17:18.06:268,18,0	1/1:6,12:20:33.09:624,33,0	0/0:12,0:14:26.41:0,26,323	0/0:25,0:25:69.21:0,69,901	0/0:20,0:20:54.17:0,54,710	0/0:14,0:14:33.10:0,33,434	0/0:21,0:21:48.11:0,48,606	0/0:29,0:29:84.27:0,84,1102	0/0:16,0:16:42.07:0,42,508	0/0:29,0:29:84.23:0,84,1074	0/0:31,0:31:84.26:0,84,1097	0/0:40,0:40:99:0,102,1325	0/0:28,0:28:78.24:0,78,1025	0/0:16,0:16:27.04:0,27,333	0/0:16,0:16:36.10:0,36,458	0/0:24,0:24:57.16:0,57,749	0/0:21,0:22:49.18:0,49,666	0/0:17,0:17:45.13:0,45,585	0/0:20,0:20:54.15:0,54,695	0/0:27,0:27:63.15:0,63,810	0/0:21,0:21:36.03:0,36,473	0/0:13,0:13:27.08:0,27,355	0/0:17,0:17:42.14:0,42,552
chr10	51071719	.	GTTGTTTTTT	G	6094.18	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=10.854;DP=528;FS=7.419;HRun=0;HaplotypeScore=150.5416;InbreedingCoeff=0.8933;MQ=73.92;MQ0=5;MQRankSum=-10.905;QD=39.07;ReadPosRankSum=5.258;VQSLOD=4.0441;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,20:22:24.04:600,24,0	0/0:10,0:10:27.09:0,27,1061	0/0:45,0:23:47.49:0,47,887	0/1:24,0:12:28.71:29,0,367	0/0:21,0:21:57.11:0,57,2009	1/1:0,0:19:42.14:1015,42,0	1/1:6,2:18:50.98:1005,51,0	0/0:27,0:28:78.23:0,78,2620	0/0:16,0:16:42.14:0,42,1512	0/0:18,0:18:54.15:0,54,1698	0/0:21,0:21:63.15:0,63,1949	1/1:0,18:18:33.11:974,33,0	1/1:2,16:18:33.11:974,33,0	0/0:21,0:20:48.05:0,48,1851	0/0:17,0:16:45.08:0,45,1548	0/0:17,0:17:48.60:0,49,1557	0/0:24,0:25:72.23:0,72,2742	0/0:8,0:8:24.08:0,24,991	0/0:24,0:25:69.13:0,69,2180	0/0:21,0:22:66.19:0,66,2148	0/0:6,0:6:15.03:0,15,521	1/1:2,15:17:39.05:979,39,0	1/1:1,11:13:20.92:341,21,0	1/1:0,6:6:6.02:176,6,0	0/0:21,0:21:63.18:0,63,2441	0/0:26,0:26:69.21:0,69,2540	0/0:16,0:17:51.14:0,51,1703	0/0:7,0:7:20.99:0,21,474
chr10	51072797	.	CATA	C	9670.45	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=16.077;DP=579;FS=0.326;HRun=0;HaplotypeScore=86.7178;InbreedingCoeff=0.9996;MQ=81.99;MQ0=0;MQRankSum=-4.134;QD=39.80;ReadPosRankSum=3.296;VQSLOD=5.9903;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,30:30:69.24:1176,69,0	0/0:12,0:12:36.12:0,36,830	0/0:18,0:18:51.14:0,51,992	0/0:14,0:14:29.01:0,29,625	0/0:37,0:37:99:0,111,2484	0/0:23,0:23:66.23:0,66,1504	0/0:9,0:9:27.08:0,27,554	1/1:1,22:23:63.17:994,63,0	0/0:21,0:21:60.21:0,60,1379	0/0:26,0:26:75.25:0,75,1648	0/0:19,0:19:57.18:0,57,1251	1/1:2,22:24:63.22:1073,63,0	1/1:1,14:15:32.64:562,33,0	0/0:22,0:22:63.19:0,63,1357	0/0:18,0:18:54.19:0,54,1243	0/0:16,0:16:48.16:0,48,1071	0/0:28,0:28:84.29:0,84,1934	0/0:11,0:11:33.11:0,33,761	1/1:0,16:16:48.14:768,48,0	1/1:2,35:37:90.24:1500,90,0	1/1:0,17:18:39.09:633,39,0	1/1:1,21:22:39.13:665,39,0	1/1:0,20:20:45.15:767,45,0	1/1:1,18:19:51.17:869,51,0	0/0:26,0:26:77.94:0,78,1740	0/0:26,0:26:72.24:0,72,1615	1/1:1,18:19:38.74:663,39,0	0/0:10,0:10:30.10:0,30,629
chr10	51073465	.	TA	T	4812.98	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=3.000;DP=672;FS=7.407;HRun=10;HaplotypeScore=115.8685;InbreedingCoeff=0.9944;MQ=73.33;MQ0=0;MQRankSum=-1.438;QD=21.30;ReadPosRankSum=2.896;VQSLOD=4.3948;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,37:40:99:865,101,0	0/0:12,0:12:33.06:0,33,353	0/0:13,0:13:11.96:0,12,113	0/0:15,0:15:27.38:0,27,266	0/0:34,2:36:41.13:0,41,893	1/1:4,13:17:41.99:364,42,0	1/1:4,20:24:65.95:563,66,0	0/0:34,0:34:84.20:0,84,905	0/0:23,1:24:43.13:0,43,703	0/0:16,0:16:36.10:0,36,398	0/0:20,1:21:28.08:0,28,531	1/1:2,27:29:71.98:625,72,0	1/1:5,10:15:23.98:208,24,0	0/0:21,2:23:34.11:0,34,604	0/0:33,0:33:84.21:0,84,920	0/0:27,1:28:55.14:0,55,821	0/0:26,0:25:60.15:0,60,655	1/1:1,20:21:44.99:391,45,0	0/0:25,0:25:69.18:0,69,754	0/0:20,0:20:33.14:0,33,571	0/0:19,0:19:54.09:0,54,583	1/1:0,26:26:65.96:573,66,0	1/1:2,22:24:65.98:573,66,0	1/1:3,27:30:74.98:651,75,0	0/0:25,0:25:51.12:0,51,594	0/0:30,0:30:78.19:0,78,852	0/0:30,1:30:49.55:0,50,729	0/0:15,0:15:42.09:0,42,448
chr10	51073490	.	G	GC	6052.25	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=3.654;DP=663;FS=10.341;HRun=2;HaplotypeScore=123.6508;InbreedingCoeff=0.9911;MQ=74.48;MQ0=0;MQRankSum=-3.588;QD=35.60;ReadPosRankSum=-0.684;VQSLOD=3.0348;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,105,1289	0/0:14,0:14:42.12:0,42,506	0/0:18,0:18:51.14:0,51,610	0/0:7,0:7:9.92:0,10,167	0/0:34,0:34:99:0,102,1251	1/1:17,0:17:44.96:421,45,0	1/1:23,0:23:54:496,54,0	1/1:1,28:29:84.28:1209,84,0	0/0:26,0:26:69.22:0,69,855	0/0:19,0:19:51.15:0,51,625	0/0:22,0:22:60.19:0,60,741	0/0:26,0:26:72.23:0,72,892	0/0:16,0:16:36.11:0,36,446	0/0:28,0:28:84.26:0,84,1041	0/0:30,0:30:90.25:0,90,1090	0/0:26,0:26:78.25:0,78,967	0/0:19,0:18:54.17:0,54,669	0/0:25,0:25:54.17:0,54,668	1/1:2,23:25:69.23:991,69,0	1/1:0,25:25:72.24:1036,72,0	1/1:1,19:20:51.17:734,51,0	0/0:21,0:21:63.18:0,63,764	0/0:30,0:30:78.24:0,78,966	0/0:26,0:26:72.17:0,72,863	0/0:23,0:23:66.20:0,66,807	0/0:29,0:29:87.27:0,87,1068	1/1:1,30:31:81.14:1165,81,0	0/0:11,0:11:33.10:0,33,409
chr10	51073492	.	C	CT	3628.94	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=9.401;DP=666;FS=9.443;HRun=0;HaplotypeScore=132.7615;InbreedingCoeff=0.8980;MQ=75.76;MQ0=0;MQRankSum=-1.719;QD=20.98;ReadPosRankSum=0.227;VQSLOD=4.7406;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,111,1512	0/0:14,0:14:42.14:0,42,587	0/0:20,0:20:54.16:0,54,707	0/0:7,0:7:15.05:0,15,210	0/0:34,0:34:99:0,102,1425	1/1:1,15:16:48.15:741,48,0	1/1:1,21:22:54.18:860,54,0	1/1:28,0:28:80.99:449,81,0	0/0:24,0:24:72.23:0,72,989	0/0:19,0:19:57.16:0,57,752	0/0:21,0:21:63.17:0,63,857	0/0:26,0:26:72.24:0,72,1006	0/0:15,0:15:39.12:0,39,530	0/0:28,0:28:84.28:0,84,1172	0/0:30,0:30:90.30:0,90,1256	0/0:27,0:27:78.26:0,78,1091	0/0:18,0:17:54.18:0,54,755	0/0:26,0:26:57.15:0,57,772	0/1:28,0:28:19.67:324,0,20	1/1:26,0:26:48.92:439,49,0	1/1:21,0:21:49.74:296,50,0	0/0:21,0:21:63.19:0,63,862	0/0:28,0:28:81.25:0,81,1115	0/0:26,0:26:72.20:0,72,984	0/0:24,0:24:69.20:0,69,943	0/0:29,0:29:87.29:0,87,1217	1/1:32,0:32:79.43:521,79,0	0/0:11,0:11:33.11:0,33,461
chr10	51073576	.	C	CA	9610.25	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-6.957;DP=683;FS=2.976;HRun=1;HaplotypeScore=78.4608;InbreedingCoeff=0.9834;MQ=81.41;MQ0=0;MQRankSum=-3.097;QD=40.55;ReadPosRankSum=2.114;VQSLOD=5.5729;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,47:48:99:2068,138,0	0/0:13,0:13:39.08:0,39,486	0/0:24,0:24:69.18:0,69,853	0/0:22,0:22:62.23:0,62,690	0/0:17,0:17:48.14:0,48,608	1/1:0,15:15:39.13:584,39,0	1/1:0,26:26:66.22:988,66,0	0/0:29,0:29:84.25:0,84,1055	0/0:21,0:21:60.18:0,60,761	0/0:30,0:30:90.28:0,90,1146	0/0:20,0:19:51.15:0,51,646	1/1:0,23:23:63.21:944,63,0	1/1:0,30:30:81.27:1211,81,0	0/0:22,1:23:24.25:0,24,812	0/0:33,0:33:96.31:0,96,1246	0/0:31,0:31:90.29:0,90,1168	0/0:29,0:29:87.24:0,87,1097	1/1:1,27:28:66.22:983,66,0	0/0:19,0:19:57.17:0,57,725	0/0:23,0:23:66.21:0,66,856	0/0:34,0:34:96.24:0,96,1225	1/1:0,18:18:51.17:764,51,0	1/1:0,28:28:81.27:1214,81,0	1/1:0,21:21:57.19:854,57,0	0/0:27,0:27:78.24:0,78,998	0/0:22,0:22:60.19:0,60,767	0/0:26,0:26:75.23:0,75,959	0/0:3,0:3:6.02:0,6,78
chr10	51074425	.	G	GCAA	13559.34	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=7.126;DP=718;FS=5.180;HRun=0;HaplotypeScore=107.6029;InbreedingCoeff=0.9103;MQ=69.53;MQ0=0;MQRankSum=-3.007;QD=44.60;ReadPosRankSum=2.547;VQSLOD=6.2461;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,34:40:90.31:1909,90,0	0/0:16,0:16:36.12:0,36,550	0/0:9,0:10:8.24:0,8,99	0/1:15,0:15:11.90:12,0,312	0/0:36,0:36:99:0,99,1494	1/1:0,24:24:60.16:1236,60,0	1/1:3,25:28:57.20:1202,57,0	0/0:22,0:22:57.16:0,57,798	0/0:27,0:27:72.20:0,72,1056	0/0:25,0:25:66.20:0,66,938	0/0:24,0:24:57.19:0,57,867	1/1:5,27:32:72.25:1535,72,0	1/1:3,19:25:48.16:1000,48,0	0/0:15,0:15:39.13:0,39,598	0/0:20,0:20:60.19:0,60,898	0/0:17,0:17:36.11:0,36,531	0/0:29,0:29:74.11:0,74,1143	1/1:3,17:20:45.15:933,45,0	0/0:20,0:20:51.15:0,51,757	0/0:35,0:35:96.32:0,96,1438	0/0:15,0:15:33.11:0,33,506	1/1:9,31:41:96.20:1911,96,0	1/1:6,38:44:99:2157,108,0	1/1:3,30:33:78.27:1664,78,0	0/0:41,0:41:99:0,105,1570	0/0:32,0:32:90.30:0,90,1362	0/0:25,0:25:72.24:0,72,1104	0/0:5,0:5:12.04:0,12,184
chr10	51076383	.	G	GCACATACACACACA	6742.47	PASS	AB=1.000;AC=25;AF=0.446;AN=56;BaseQRankSum=2.215;DP=492;FS=11.101;HRun=0;HaplotypeScore=183.1756;InbreedingCoeff=0.4622;MQ=64.42;MQ0=4;MQRankSum=-5.714;QD=21.47;ReadPosRankSum=-2.327;VQSLOD=2.8064;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:25:22.98:211,23,0	0/1:6,0:5:12.34:134,0,12	0/0:20,0:12:27.07:0,27,280	0/0:27,0:13:30:0,30,289	0/0:13,0:14:26.90:0,27,293	1/1:7,15:27:9.03:493,9,0	1/1:14,0:14:38.08:608,38,0	0/1:25,0:25:99:893,0,121	0/0:10,0:10:23.98:0,24,262	0/0:14,0:14:25.97:0,26,327	0/0:10,0:12:26.18:0,26,255	1/1:31,0:31:40.96:716,41,0	1/1:27,0:25:47.18:667,47,0	0/0:13,0:13:31.98:0,32,544	0/1:20,0:20:33.31:158,0,33	0/1:22,0:22:99:164,0,197	0/0:24,0:27:65.91:0,66,893	1/1:20,0:20:41.82:752,42,0	0/1:13,0:12:23.02:207,0,23	0/1:8,0:8:31.90:32,0,107	0/0:11,0:11:10.80:0,11,77	1/1:21,0:21:40.22:382,40,0	1/1:8,0:8:15:184,15,0	1/1:25,0:22:41.69:491,42,0	0/0:10,0:12:4.62:0,5,246	0/0:11,0:11:21.79:0,22,275	0/1:20,0:20:99:649,0,111	0/0:5,0:7:17.34:0,17,325
chr10	51077734	.	A	AAAAT	1329.36	PASS	AB=0.867;AC=20;AF=0.526;AN=38;BaseQRankSum=-2.617;DP=269;FS=0.000;HRun=0;HaplotypeScore=42.1266;InbreedingCoeff=0.5098;MQ=70.45;MQ0=7;MQRankSum=0.501;QD=12.20;ReadPosRankSum=0.835;VQSLOD=2.2400;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:7,4:11:34.78:200,0,35	1/1:2,3:5:9.03:184,9,0	./.	./.	0/0:17,0:17:12.03:0,12,165	0/0:16,0:16:24.08:0,24,375	0/0:3,0:3:3.01:0,3,47	1/1:27,0:27:12.03:207,12,0	0/0:8,0:8:9:0,9,116	0/0:7,0:7:6.02:0,6,93	0/1:10,0:10:27.86:28,0,128	./.	1/1:7,1:8:3.01:71,3,0	./.	./.	1/1:3,1:4:3.01:71,3,0	0/0:22,0:22:27.09:0,27,421	1/1:7,3:10:11.40:220,11,0	1/1:8,2:9:6.02:142,6,0	1/1:7,2:9:6.02:142,6,0	1/1:4,3:7:6.02:142,6,0	./.	./.	./.	0/0:9,0:9:9.03:0,9,140	./.	1/1:6,1:8:3.01:71,3,0	0/0:15,0:15:36.12:0,36,563
chr10	51079417	.	TACACACAC	T	1255.74	PASS	AB=1.000;AC=21;AF=0.420;AN=50;BaseQRankSum=3.826;DP=621;FS=0.000;HRun=0;HaplotypeScore=166.2068;InbreedingCoeff=0.4178;MQ=59.72;MQ0=15;MQRankSum=-4.192;QD=4.12;ReadPosRankSum=0.284;VQSLOD=2.6583;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:46,0:46:0:0,0,0	./.	./.	./.	0/0:20,0:22:48.13:0,48,1102	0/0:25,0:24:11.98:0,12,99	0/1:30,0:30:23.77:57,0,24	0/1:34,0:33:38.64:39,0,57	0/0:23,0:24:45.60:0,46,1131	0/0:21,0:21:51.04:0,51,1158	0/0:12,0:11:18.05:0,18,361	0/1:22,0:22:36.78:37,0,41	1/1:17,0:17:6.01:79,6,0	0/0:28,0:28:33.02:0,33,751	0/0:21,0:24:24.06:0,24,477	0/0:18,0:32:17.96:0,18,179	0/0:32,0:32:81.15:0,81,1999	0/1:12,0:12:56.10:56,0,80	1/1:6,4:8:12.04:303,12,0	1/1:8,11:20:3.39:133,3,0	1/1:34,0:32:23.99:331,24,0	1/1:11,0:12:1.11:3,1,0	1/1:18,0:18:0.70:3,1,0	1/1:23,0:23:0.83:3,1,0	0/0:20,0:19:39.13:0,39,1365	0/0:15,0:14:18.06:0,18,441	1/1:10,15:27:1.26:367,1,0	0/0:6,0:6:6.02:0,6,107
chr10	51079444	.	ACACACACACACG	A	774.58	PASS	AB=0.971;AC=16;AF=0.296;AN=54;BaseQRankSum=3.307;DP=698;FS=0.000;HRun=0;HaplotypeScore=193.6046;InbreedingCoeff=0.6412;MQ=49.48;MQ0=36;MQRankSum=-2.188;QD=3.69;ReadPosRankSum=-1.973;VQSLOD=2.2425;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,33:45:2.88:15,3,0	0/0:5,0:5:9:0,9,123	0/0:39,0:10:13.47:0,13,91	0/0:49,0:8:14.55:0,15,112	0/0:21,0:21:60.12:0,60,1847	./.	1/1:7,24:31:8.92:110,9,0	0/0:39,0:36:75.74:0,76,798	0/0:25,0:25:62.14:0,62,1862	0/0:25,0:24:68.98:0,69,1845	0/0:14,0:13:36.07:0,36,921	1/1:4,20:24:5.89:117,6,0	1/1:1,16:17:6.02:192,6,0	0/0:25,0:25:35.97:0,36,1029	0/0:19,0:19:36.06:0,36,939	0/0:30,0:28:26.59:0,27,392	0/0:35,0:35:96.23:0,96,3114	0/1:15,1:16:30.49:295,0,30	0/0:18,0:18:44.21:0,44,373	0/0:24,0:24:42.02:0,42,624	0/0:52,0:47:79.38:0,79,868	1/1:11,4:15:20.64:189,21,0	1/1:0,12:12:1.77:3,2,0	1/1:2,21:23:0.86:2,1,0	0/0:19,0:18:45.14:0,45,1998	0/0:17,0:15:41.78:0,42,949	0/1:26,0:26:9.80:10,0,158	0/0:6,0:5:12.01:0,12,166
chr10	51079655	.	T	TTA	4810.21	PASS	AB=1.000;AC=24;AF=0.444;AN=54;BaseQRankSum=-0.633;DP=382;FS=2.663;HRun=0;HaplotypeScore=55.5039;InbreedingCoeff=0.7615;MQ=66.10;MQ0=1;MQRankSum=1.266;QD=23.46;ReadPosRankSum=0.187;VQSLOD=5.1520;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:20:42.11:451,42,0	0/0:6,0:6:18.04:0,18,212	0/0:6,0:7:2.79:0,3,14	0/0:11,0:9:8.50:0,9,42	0/0:21,0:21:54.16:0,54,661	0/1:23,0:23:0.58:336,0,1	0/1:10,0:10:23.64:134,0,24	1/1:12,29:41:36.92:1327,37,0	0/0:6,0:6:18.04:0,18,211	0/0:20,0:20:48.12:0,48,557	0/0:12,0:12:33.11:0,33,412	1/1:6,0:6:12.03:129,12,0	1/1:12,0:12:17.98:187,18,0	0/0:4,0:4:12.04:0,12,150	0/0:4,0:4:6.02:0,6,75	0/0:12,0:12:27.09:0,27,338	0/0:19,1:20:7.55:0,8,573	1/1:15,0:15:24.06:256,24,0	1/1:7,6:13:21.05:299,21,0	1/1:4,14:20:36.12:594,36,0	1/1:2,0:2:3.01:49,3,0	1/1:9,0:9:3.01:32,3,0	1/1:12,0:12:20.99:225,21,0	./.	0/0:26,0:26:69.13:0,69,781	0/0:16,0:16:39.11:0,39,466	1/1:2,18:21:48.16:790,48,0	0/0:12,0:12:24.06:0,24,286
chr10	51079667	.	A	ATG	3689.33	PASS	AB=0.971;AC=24;AF=0.444;AN=54;BaseQRankSum=7.601;DP=368;FS=10.184;HRun=0;HaplotypeScore=55.2139;InbreedingCoeff=0.6387;MQ=66.14;MQ0=1;MQRankSum=1.316;QD=18.26;ReadPosRankSum=3.105;VQSLOD=2.8873;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,0:22:42.12:477,42,0	0/0:7,0:7:18.05:0,18,221	0/0:4,0:4:8.84:0,9,56	0/1:9,0:7:3.60:4,0,58	0/0:26,0:26:75.11:0,75,860	1/1:2,21:25:42.14:719,42,0	1/1:2,6:9:18.06:309,18,0	0/1:37,1:38:99:503,0,121	0/0:8,0:8:21.03:0,21,245	0/0:18,0:18:42.08:0,42,520	0/0:15,0:15:45.09:0,45,533	1/1:0,0:8:12.03:136,12,0	1/1:0,0:9:18.04:197,18,0	0/0:6,0:6:18.03:0,18,206	0/0:4,0:4:9.02:0,9,103	0/0:9,0:9:27.09:0,27,355	0/0:19,0:19:22.58:0,23,563	1/1:0,0:14:24.07:273,24,0	0/1:9,1:10:54.23:134,0,54	1/1:18,0:18:14.15:280,14,0	1/1:1,0:1:3:26,3,0	1/1:0,0:5:3.01:34,3,0	1/1:0,0:10:21:238,21,0	./.	0/0:27,0:27:57.16:0,57,719	0/0:14,0:14:33.10:0,33,420	0/1:23,0:23:36.44:359,0,36	0/0:9,0:9:24.06:0,24,299
chr10	51080924	.	C	CTTTCT	3484.65	PASS	AB=1.000;AC=20;AF=0.357;AN=56;BaseQRankSum=11.445;DP=534;FS=6.435;HRun=0;HaplotypeScore=132.5187;InbreedingCoeff=0.8174;MQ=66.90;MQ0=3;MQRankSum=-9.973;QD=16.44;ReadPosRankSum=-0.467;VQSLOD=2.9756;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:21:45.42:579,45,0	0/0:5,0:5:12.04:0,12,183	0/1:22,0:10:19.70:20,0,30	0/1:26,0:14:3.63:4,0,69	0/0:24,0:24:27.08:0,27,404	1/1:5,16:21:15.05:427,15,0	1/1:5,7:12:3.01:85,3,0	0/0:32,0:32:39.10:0,39,492	0/0:9,0:9:15.05:0,15,256	0/0:19,0:19:42.12:0,42,670	0/0:19,0:19:45.12:0,45,705	1/1:15,0:15:26.86:329,27,0	1/1:14,0:14:23.95:333,24,0	0/0:13,0:13:21.04:0,21,281	0/0:15,0:15:21.02:0,21,277	0/0:14,0:14:24.08:0,24,404	0/0:29,0:29:69.19:0,69,1102	1/1:26,0:26:42.71:452,43,0	0/0:21,0:21:18.01:0,18,220	0/0:24,0:24:60.11:0,60,914	0/0:15,0:15:18.06:0,18,274	1/1:18,0:18:29.96:418,30,0	1/1:25,0:25:45.51:712,46,0	1/1:12,0:12:8.99:125,9,0	0/0:21,0:21:51.13:0,51,802	0/0:28,0:28:54.17:0,54,870	0/0:24,0:24:60.16:0,60,1033	0/0:10,0:10:30.10:0,30,515
chr10	51080948	.	C	CT	1342.29	PASS	AB=0.861;AC=10;AF=0.179;AN=56;BaseQRankSum=11.845;DP=498;FS=10.901;HRun=4;HaplotypeScore=74.3466;InbreedingCoeff=-0.2225;MQ=60.14;MQ0=10;MQRankSum=-7.671;QD=6.81;ReadPosRankSum=-0.946;VQSLOD=-0.4171;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:17,3:20:99:177,0,305	0/0:6,0:6:12.04:0,12,144	0/1:28,0:10:30.33:30,0,62	0/1:35,0:9:7.47:7,0,96	0/0:13,0:13:33.10:0,33,395	0/1:23,0:23:18.80:19,0,184	0/0:10,0:10:4.42:0,4,133	0/0:35,0:35:93.26:0,93,1095	0/0:6,0:6:18.04:0,18,204	0/0:20,0:20:54.16:0,54,648	0/0:17,0:17:48.13:0,48,564	0/1:8,4:12:99:179,0,156	0/1:7,3:10:99:115,0,131	0/0:9,0:9:27.08:0,27,323	0/0:12,0:12:33.08:0,33,378	0/0:10,0:10:30.09:0,30,360	0/0:29,0:29:84.26:0,84,1003	0/1:26,4:30:99:407,0,250	0/0:18,0:14:41.57:0,42,426	0/0:27,0:27:78.24:0,78,936	0/0:6,0:6:18.06:0,18,216	0/1:9,4:13:77.44:215,0,77	0/1:15,4:19:99:262,0,302	0/1:4,2:6:56.75:75,0,57	0/0:26,0:26:72.20:0,72,850	0/0:21,0:21:60.18:0,60,719	0/0:23,1:24:46.84:0,47,802	0/0:12,0:12:36.07:0,36,406
chr10	51080949	.	TTTC	T	1534.51	PASS	AB=0.888;AC=9;AF=0.161;AN=56;BaseQRankSum=10.826;DP=500;FS=10.063;HRun=0;HaplotypeScore=91.3359;InbreedingCoeff=-0.1825;MQ=60.05;MQ0=10;MQRankSum=-7.576;QD=8.77;ReadPosRankSum=-1.418;VQSLOD=2.1139;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:16,3:19:99:248,0,635	0/0:6,0:6:18.06:0,18,334	0/1:29,0:11:1.09:1,0,187	0/1:35,1:9:40.10:40,0,199	0/0:13,0:13:33.11:0,33,653	0/0:23,0:23:33.04:0,33,611	0/0:10,0:10:15.05:0,15,305	0/0:37,0:37:99:0,99,2054	0/0:6,0:6:18.06:0,18,382	0/0:19,0:19:54.18:0,54,1241	0/0:17,0:17:48.15:0,48,978	0/1:10,2:12:99:193,0,363	0/1:8,2:10:99:122,0,315	0/0:10,0:10:30.10:0,30,588	0/0:12,0:12:36.11:0,36,705	0/0:10,0:10:30.10:0,30,646	0/0:28,0:28:84.28:0,84,1818	0/1:25,6:31:99:426,0,561	0/0:18,0:14:42.03:0,42,744	0/0:27,0:27:78.27:0,78,1749	0/0:6,0:6:18.06:0,18,360	0/1:9,4:13:99:248,0,177	0/1:16,3:19:99:321,0,624	0/1:6,0:6:71.39:71,0,123	0/0:26,0:26:75.25:0,75,1618	0/0:21,0:21:60.20:0,60,1238	0/0:24,0:24:71.91:0,72,1525	0/0:12,0:12:36.12:0,36,790
chr10	51080959	.	TCTC	T	783.06	PASS	AB=0.758;AC=7;AF=0.125;AN=56;BaseQRankSum=9.075;DP=454;FS=8.941;HRun=0;HaplotypeScore=82.8433;InbreedingCoeff=-0.1480;MQ=62.24;MQ0=13;MQRankSum=-7.089;QD=9.32;ReadPosRankSum=0.185;VQSLOD=1.8239;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:14,3:18:99:148,0,809	0/0:6,0:6:18.06:0,18,337	0/0:22,0:10:14.94:0,15,212	0/0:40,0:13:19.90:0,20,307	0/0:9,0:9:24.08:0,24,591	0/0:21,0:21:33.11:0,33,810	0/0:9,0:9:15.05:0,15,367	0/0:36,0:36:99:0,105,2319	0/0:6,0:6:18.04:0,18,317	0/0:19,0:19:57.20:0,57,1395	0/0:16,0:16:48.15:0,48,1073	0/1:7,3:10:99:119,0,473	0/1:5,1:7:76.40:76,0,348	0/0:8,0:8:24.08:0,24,578	0/0:13,0:13:39.13:0,39,907	0/0:9,0:9:27.08:0,27,616	0/0:28,0:28:84.29:0,84,2017	0/1:14,7:21:99:197,0,845	0/0:16,0:10:30.07:0,30,671	0/0:28,0:28:81.28:0,81,1966	0/0:4,0:4:9.03:0,9,222	0/1:4,5:9:99:174,0,197	0/1:10,5:15:99:178,0,691	0/1:3,1:4:21.95:22,0,138	0/0:26,0:26:75.26:0,75,1765	0/0:19,0:19:57.18:0,57,1285	0/0:22,0:22:66.22:0,66,1569	0/0:12,0:12:36.12:0,36,859
chr10	51080968	.	T	TC	359.79	PASS	AB=0.837;AC=7;AF=0.125;AN=56;BaseQRankSum=8.931;DP=454;FS=11.427;HRun=0;HaplotypeScore=71.5957;InbreedingCoeff=-0.1550;MQ=63.41;MQ0=14;MQRankSum=-6.469;QD=3.33;ReadPosRankSum=-1.943;VQSLOD=1.6312;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:19,2:21:76.91:77,0,458	0/0:5,0:5:15.04:0,15,195	0/1:22,0:9:12.14:12,0,114	0/0:38,0:13:16.12:0,16,178	0/0:9,0:9:24.08:0,24,335	0/0:17,0:17:36.12:0,36,503	0/0:6,0:6:15.02:0,15,189	0/0:37,0:37:99:0,102,1395	0/0:4,0:4:12.03:0,12,152	0/0:19,0:19:57.19:0,57,796	0/0:15,0:15:45.14:0,45,615	0/1:10,2:12:68.84:69,0,325	0/1:6,1:7:42.94:43,0,188	0/0:12,0:12:36.12:0,36,503	0/0:14,0:14:42.14:0,42,586	0/0:8,0:8:24.08:0,24,336	0/0:31,0:31:93.27:0,93,1274	0/1:15,7:22:99:132,0,521	0/0:13,0:10:27.09:0,27,377	0/0:29,0:29:84.27:0,84,1158	0/0:4,0:4:9.02:0,9,110	0/1:4,4:8:68.64:69,0,105	0/1:12,3:15:87.77:88,0,373	0/0:3,1:4:3.57:0,4,79	0/0:25,0:25:75.24:0,75,1020	0/0:20,0:20:60.19:0,60,822	0/0:24,0:24:69.22:0,69,949	0/0:12,0:12:36.12:0,36,503
chr10	51081808	.	CTG	C	7562.33	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=15.155;DP=725;FS=1.407;HRun=0;HaplotypeScore=88.7395;InbreedingCoeff=0.9998;MQ=83.90;MQ0=1;MQRankSum=-1.557;QD=41.78;ReadPosRankSum=3.522;VQSLOD=6.2411;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,38:38:99:1560,102,0	0/0:13,0:13:39.13:0,39,744	0/0:28,0:28:81.26:0,81,1387	0/0:16,0:16:42.13:0,42,710	0/0:32,0:32:96.29:0,96,1776	0/0:38,0:38:99:0,114,2143	0/0:17,0:17:51.17:0,51,984	0/0:29,0:29:84.26:0,84,1502	0/0:31,0:31:93.30:0,93,1741	0/0:28,0:28:84.28:0,84,1583	0/0:23,0:23:69.22:0,69,1270	1/1:0,26:26:78.26:1193,78,0	1/1:1,28:29:78.26:1193,78,0	0/0:29,1:30:38.34:0,38,1448	0/0:29,0:29:87.27:0,87,1604	0/0:22,0:22:63.22:0,63,1199	0/0:30,0:30:87.75:0,88,1621	1/1:0,16:15:42.14:632,42,0	0/0:23,0:23:66.22:0,66,1246	0/0:28,0:28:81.24:0,81,1486	0/0:30,0:30:90.27:0,90,1660	1/1:0,21:21:60.20:918,60,0	1/1:0,30:30:78.16:1193,78,0	1/1:0,21:21:57.19:872,57,0	0/0:17,0:17:51.11:0,51,913	0/0:38,0:38:99:0,111,2112	0/0:33,0:33:99:0,99,1904	0/0:9,0:9:27.09:0,27,521
chr10	51082883	.	CT	C	805.06	PASS	AB=0.885;AC=8;AF=0.143;AN=56;BaseQRankSum=6.772;DP=615;FS=5.283;HRun=12;HaplotypeScore=64.6321;InbreedingCoeff=0.6039;MQ=69.98;MQ0=0;MQRankSum=-0.538;QD=10.32;ReadPosRankSum=1.609;VQSLOD=3.0730;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:40:83.80:0,84,809	1/1:2,7:9:20.91:163,21,0	0/0:9,0:9:5.86:0,6,61	0/0:9,0:8:8.05:0,8,67	0/0:25,2:30:26.30:0,26,575	0/0:23,1:24:36.87:0,37,550	0/0:15,1:17:24.71:0,25,417	0/0:30,2:33:25.45:0,25,587	0/0:15,1:18:15.64:0,16,312	0/0:26,1:27:42.90:0,43,612	0/0:17,2:20:1.45:0,1,358	0/0:33,2:35:49.37:0,49,672	0/0:20,2:22:4.59:0,5,390	0/0:19,0:19:45.04:0,45,436	1/1:2,19:22:43.84:331,44,0	1/1:1,21:23:58.82:447,59,0	0/0:17,4:22:10.44:0,10,437	0/0:13,0:13:30.01:0,30,290	0/0:18,1:19:15.82:0,16,332	0/0:33,1:35:51.74:0,52,687	0/0:17,0:18:35.86:0,36,337	0/0:16,2:20:1.36:0,1,347	0/0:29,3:33:14.70:0,15,645	0/0:19,0:21:41.90:0,42,403	0/1:15,2:17:1.43:1,0,333	0/0:28,0:28:33.82:0,34,503	0/0:20,3:25:33.66:0,34,493	0/1:5,1:7:5.37:5,0,118
chr10	51083962	.	CACAGAG	C	1483.47	PASS	AB=0.990;AC=26;AF=0.464;AN=56;BaseQRankSum=8.538;DP=681;FS=0.000;HRun=0;HaplotypeScore=156.9717;InbreedingCoeff=0.4166;MQ=40.34;MQ0=52;MQRankSum=-6.082;QD=3.91;ReadPosRankSum=-2.055;VQSLOD=1.9838;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:24,2:24:11.80:109,12,0	0/1:8,0:8:12.54:41,0,13	0/0:24,0:1:3.01:0,3,38	0/0:51,0:3:9.03:0,9,143	0/0:26,0:26:48.16:0,48,1205	1/1:30,1:30:1.15:27,1,0	0/1:33,0:29:0:0,0,0	0/1:29,2:27:99:407,0,108	0/0:19,0:19:51.17:0,51,1484	0/0:25,0:22:59.89:0,60,1101	0/0:20,0:20:33.11:0,33,785	1/1:25,1:24:0.38:33,0,0	1/1:25,0:24:11.11:204,11,0	0/0:17,0:16:48.16:0,48,1116	1/1:29,0:29:3.84:16,4,0	1/1:24,0:23:19.52:144,20,0	0/0:35,0:32:52.31:0,52,1588	1/1:18,0:16:9.01:85,9,0	0/1:23,0:19:33.18:364,0,33	0/1:30,0:29:1.39:1,0,10	0/0:18,0:13:3.01:0,3,33	1/1:16,1:18:7.28:28,7,0	1/1:18,1:17:2.93:33,3,0	1/1:24,1:23:0.76:24,1,0	0/0:26,0:26:57.13:0,57,1336	0/0:27,0:25:73.13:0,73,1673	0/1:13,0:13:23.08:143,0,23	0/0:14,0:13:35.91:0,36,717
chr10	51083964	.	CAGAG	C	1873.84	PASS	AB=0.719;AC=27;AF=0.500;AN=54;BaseQRankSum=8.068;DP=665;FS=1.180;HRun=0;HaplotypeScore=143.4694;InbreedingCoeff=0.5274;MQ=40.23;MQ0=49;MQRankSum=-6.978;QD=5.04;ReadPosRankSum=-2.135;VQSLOD=2.2821;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:13,11:23:6.72:59,7,0	1/1:6,1:8:4.42:59,4,0	0/0:24,0:1:3.01:0,3,38	0/0:51,0:3:9.03:0,9,143	0/0:25,0:25:45.14:0,45,963	1/1:12,17:28:2.82:18,3,0	0/1:9,0:29:0:0,0,0	0/1:26,5:28:65.47:544,0,65	0/0:19,0:19:51.17:0,51,1216	0/0:24,0:21:54.04:0,54,918	0/0:17,0:17:30.10:0,30,642	0/1:14,12:24:8.49:42,0,8	1/1:12,13:24:2.30:152,2,0	0/0:17,0:16:48.13:0,48,907	1/1:19,0:29:4.18:15,4,0	1/1:19,0:23:17.60:187,18,0	0/0:34,0:31:68.99:0,69,1350	0/1:7,12:17:26.88:74,0,27	1/1:17,5:18:26.97:492,27,0	1/1:19,6:25:5.77:77,6,0	0/1:15,3:13:0:0,0,0	./.	1/1:6,13:17:2.95:23,3,0	1/1:13,12:23:2.27:19,2,0	0/0:26,0:26:51.15:0,51,1050	0/0:26,0:25:72.19:0,72,1398	1/1:6,7:14:22.59:292,23,0	0/0:14,0:13:36.12:0,36,690
chr10	51083990	.	CAG	C	487.13	PASS	AB=0.983;AC=23;AF=0.442;AN=52;BaseQRankSum=9.239;DP=621;FS=0.000;HRun=0;HaplotypeScore=149.5508;InbreedingCoeff=0.5639;MQ=43.32;MQ0=31;MQRankSum=-8.499;QD=1.41;ReadPosRankSum=1.692;VQSLOD=1.8232;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:18:3.09:12,3,0	1/1:3,2:5:3.80:20,4,0	./.	0/1:32,1:4:0:0,0,0	0/0:24,0:23:56.93:0,57,836	0/1:31,0:30:0.35:0,0,10	0/1:27,0:25:0:0,0,0	0/1:19,2:17:27.28:67,0,27	0/0:27,0:27:66.04:0,66,1096	0/0:22,0:20:53.79:0,54,803	0/0:21,0:19:45.15:0,45,751	0/1:23,0:23:0.05:0,0,0	0/0:23,0:22:8.84:0,9,84	0/0:17,0:17:45.15:0,45,761	1/1:26,1:27:2.92:17,3,0	1/1:24,0:24:11.60:70,12,0	0/0:28,0:26:39.12:0,39,617	0/0:23,0:22:0.87:0,1,115	1/1:22,2:22:21.33:256,21,0	1/1:24,3:27:2.63:17,3,0	0/1:24,0:22:0:0,0,0	./.	1/1:24,0:21:0.85:2,1,0	0/1:21,0:19:0:0,0,0	0/0:19,0:19:41.96:0,42,625	0/0:23,0:22:54.15:0,54,846	1/1:12,0:13:20.69:174,21,0	0/0:17,0:17:51.14:0,51,808
chr10	51083992	.	GAGAGAGAGACAGAGAC	G	3563.81	PASS	AB=1.000;AC=28;AF=0.500;AN=56;BaseQRankSum=9.623;DP=624;FS=1.173;HRun=0;HaplotypeScore=212.9071;InbreedingCoeff=0.4874;MQ=43.66;MQ0=30;MQRankSum=-8.321;QD=9.53;ReadPosRankSum=-0.013;VQSLOD=2.2266;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:21,0:17:1.27:85,0,1	1/1:5,0:6:8.32:117,8,0	0/0:18,0:1:3.01:0,3,37	0/1:31,0:5:3.88:4,0,84	0/0:26,0:25:66.14:0,66,2570	0/1:31,0:30:1.75:96,0,2	0/1:27,0:25:0:0,0,0	1/1:16,0:16:33.37:552,33,0	0/0:27,0:27:69.01:0,69,3495	0/0:21,0:19:54.14:0,54,2545	0/0:22,0:20:53.94:0,54,2336	1/1:22,0:22:2.09:13,2,0	0/1:23,0:22:39.41:39,0,69	0/0:18,0:18:51.11:0,51,2492	1/1:3,20:26:2.90:89,3,0	1/1:2,19:23:12.04:523,12,0	0/0:29,0:27:50.85:0,51,2207	0/1:23,0:22:99:105,0,160	1/1:11,11:22:46.50:1130,46,0	1/1:7,17:27:2.22:90,2,0	0/0:5,19:22:0:0,0,0	1/1:13,0:11:2.90:16,3,0	1/1:24,0:21:2.77:16,3,0	1/1:20,0:18:2.94:18,3,0	0/0:21,0:20:50.89:0,51,1721	0/0:24,0:23:63.17:0,63,2859	1/1:3,7:13:20.24:671,20,0	0/0:19,0:19:57.16:0,57,3078
chr10	51084000	.	GAC	G	674.01	PASS	AB=0.978;AC=28;AF=0.500;AN=56;BaseQRankSum=10.378;DP=602;FS=0.000;HRun=0;HaplotypeScore=153.2234;InbreedingCoeff=0.4035;MQ=46.50;MQ0=25;MQRankSum=-6.581;QD=1.70;ReadPosRankSum=-0.812;VQSLOD=2.3335;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:18:7.65:42,8,0	0/1:8,1:9:10.24:23,0,10	0/0:15,0:7:11.98:0,12,111	0/1:30,0:8:10.95:19,0,11	0/0:25,0:23:60.08:0,60,991	0/1:31,0:30:6.91:20,0,7	1/1:23,0:21:2.98:23,3,0	0/1:28,0:25:99:113,0,116	0/0:27,0:27:74.80:0,75,1310	0/0:21,0:19:51.08:0,51,923	0/0:21,0:19:51.16:0,51,935	1/1:21,0:21:3.81:43,4,0	0/1:22,0:22:9.99:10,0,65	0/0:17,0:17:48.15:0,48,882	1/1:26,0:26:0.88:2,1,0	1/1:23,1:24:10.94:69,11,0	0/0:21,0:21:53.37:0,53,793	0/1:21,1:21:17.63:18,0,132	1/1:18,2:18:35.80:231,36,0	0/1:24,0:24:0.08:0,0,0	0/1:27,0:23:0:0,0,0	1/1:12,0:10:2.99:24,3,0	1/1:20,0:18:2.95:23,3,0	1/1:22,0:20:7.29:50,7,0	0/0:15,0:15:43.29:0,43,641	0/0:21,0:20:54.09:0,54,931	1/1:13,0:13:18.67:143,19,0	0/0:21,0:21:57.12:0,57,937
chr10	51084006	.	GAC	G	497.93	PASS	AB=0.898;AC=21;AF=0.375;AN=56;BaseQRankSum=8.649;DP=599;FS=3.793;HRun=0;HaplotypeScore=160.2766;InbreedingCoeff=0.5085;MQ=50.64;MQ0=20;MQRankSum=-2.473;QD=1.74;ReadPosRankSum=-1.267;VQSLOD=2.4823;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:18,6:20:8.61:62,9,0	0/0:9,0:9:6.33:0,6,37	0/0:16,0:10:27.65:0,28,395	0/0:34,0:14:22.61:0,23,281	0/0:23,0:21:63.19:0,63,1120	1/1:22,13:34:16.08:101,16,0	1/1:23,1:22:2.98:22,3,0	0/0:26,0:24:14.10:0,14,288	0/0:29,0:29:80.87:0,81,1516	0/0:19,0:19:57.18:0,57,1039	0/0:20,0:18:51.17:0,51,983	1/1:16,7:23:8.18:55,8,0	0/1:13,10:23:20.98:72,0,21	0/0:18,0:18:51.14:0,51,929	0/0:25,0:24:2.92:0,3,17	1/1:23,0:23:8.51:39,9,0	0/0:20,0:20:45.14:0,45,866	0/1:17,3:19:67.83:68,0,75	0/1:21,0:18:58.69:59,0,71	0/0:22,0:22:2.39:0,2,14	0/1:26,0:23:0:0,0,0	1/1:7,4:9:5.99:49,6,0	1/1:16,7:21:9.41:73,9,0	1/1:16,5:20:5.74:47,6,0	0/0:12,1:13:35.52:0,36,618	0/0:18,0:17:51.17:0,51,960	0/1:11,1:12:11.25:33,0,11	0/0:20,0:20:57.18:0,57,1059
chr10	51084008	.	C	CAG	1527.72	PASS	AB=0.958;AC=25;AF=0.446;AN=56;BaseQRankSum=8.360;DP=599;FS=0.000;HRun=0;HaplotypeScore=159.5843;InbreedingCoeff=0.2688;MQ=51.41;MQ0=20;MQRankSum=0.361;QD=4.04;ReadPosRankSum=-5.143;VQSLOD=0.7741;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:19:3.18:62,0,3	1/1:3,6:9:8.62:104,9,0	0/0:16,0:11:26.29:0,26,374	0/1:33,0:16:3.69:4,0,204	0/0:24,0:22:57.16:0,57,778	0/1:31,0:30:3.77:68,0,4	1/1:22,0:20:3.01:47,3,0	0/1:14,14:26:99:613,0,113	0/0:29,0:29:81.21:0,81,1138	0/0:19,0:19:57.17:0,57,769	0/0:20,0:18:51.15:0,51,711	1/1:24,0:24:11.76:131,12,0	0/1:23,0:23:43.11:43,0,54	0/0:18,0:18:48.14:0,48,667	1/1:26,0:25:3:36,3,0	0/1:23,0:23:13.38:29,0,13	0/0:18,0:18:45.15:0,45,644	0/1:21,0:20:19.81:20,0,62	0/1:22,1:20:71.25:256,0,71	1/1:25,0:25:2.98:38,3,0	0/0:27,0:24:0:0,0,0	1/1:10,0:8:3.01:46,3,0	1/1:23,0:21:9.47:95,9,0	1/1:22,0:21:8.97:91,9,0	0/0:13,0:13:35.71:0,36,482	0/0:18,0:17:48.16:0,48,687	0/1:12,0:12:21.44:21,0,44	0/0:19,0:19:57.19:0,57,811
chr10	51084010	.	GACAGAGAC	G	1570.23	PASS	AB=0.897;AC=23;AF=0.411;AN=56;BaseQRankSum=10.210;DP=596;FS=0.000;HRun=0;HaplotypeScore=194.3078;InbreedingCoeff=0.3768;MQ=52.83;MQ0=19;MQRankSum=-3.087;QD=5.08;ReadPosRankSum=-0.824;VQSLOD=2.3813;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:17,6:20:26.69:106,0,27	0/1:9,0:9:9.86:10,0,11	0/0:17,0:11:33.09:0,33,852	0/0:34,0:17:22.29:0,22,540	0/0:25,0:23:63.20:0,63,2132	1/1:16,13:28:20.18:274,20,0	1/1:19,1:18:5.95:69,6,0	0/0:28,0:28:0.45:0,0,373	0/0:30,0:30:83.90:0,84,2993	0/0:19,0:19:57.18:0,57,2072	0/0:21,0:19:54.06:0,54,1911	1/1:17,7:24:13.86:199,14,0	0/1:13,10:23:99:178,0,115	0/0:17,0:17:48.15:0,48,1696	1/1:25,0:25:0.84:2,1,0	1/1:20,0:21:12.04:179,12,0	0/0:19,0:19:48.16:0,48,1727	0/1:18,2:20:51.96:189,0,52	0/1:21,0:19:87.18:161,0,87	0/0:23,0:23:1.80:0,2,53	0/1:25,0:24:0:0,0,0	1/1:4,4:7:4.56:72,5,0	1/1:16,7:21:5.85:75,6,0	1/1:15,5:20:6.81:78,7,0	0/0:12,0:12:35.71:0,36,1147	0/0:19,0:18:51.17:0,51,1863	0/1:12,0:12:47.25:156,0,47	0/0:20,0:20:60.21:0,60,2363
chr10	51084016	.	GAC	G	410.47	PASS	AB=0.983;AC=16;AF=0.286;AN=56;BaseQRankSum=7.433;DP=616;FS=6.318;HRun=0;HaplotypeScore=165.6472;InbreedingCoeff=-0.1781;MQ=56.22;MQ0=17;MQRankSum=-2.780;QD=1.20;ReadPosRankSum=-1.899;VQSLOD=1.7818;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:21:17.47:17,0,59	0/0:8,0:8:5.80:0,6,34	0/0:25,0:14:33.10:0,33,583	0/0:37,1:20:31.59:0,32,513	0/0:25,0:24:72.16:0,72,1268	0/1:29,0:28:25.41:25,0,38	0/1:22,0:22:12.21:13,0,12	0/1:31,2:31:99:171,0,189	0/0:29,0:29:80.93:0,81,1492	0/0:19,0:19:57.15:0,57,1012	0/0:20,0:18:51.16:0,51,950	0/1:25,0:25:23.74:45,0,24	0/1:24,0:24:9.19:9,0,177	0/0:16,0:16:45.15:0,45,838	0/1:24,1:24:16.46:19,0,16	1/1:20,1:21:12.53:72,13,0	0/0:20,0:20:51.17:0,51,939	0/1:23,0:22:52.28:52,0,181	0/1:16,0:14:39.69:40,0,78	0/1:25,0:25:17.42:17,0,55	0/1:27,2:26:0:0,0,0	0/1:11,0:10:15.58:16,0,28	0/1:21,0:19:18.15:18,0,31	0/0:20,0:19:1.58:0,2,18	0/0:15,0:15:40.36:0,40,723	0/0:19,0:18:54.17:0,54,963	0/1:12,1:13:40.19:51,0,40	0/0:20,0:20:60.21:0,60,1156
chr10	51085712	.	TGGGATGCTGAGTTTAGAAGGCTGGTAATGTGGTTCCTCC	T	10204.61	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=9.743;DP=630;FS=0.653;HRun=0;HaplotypeScore=513.1195;InbreedingCoeff=0.9109;MQ=85.48;MQ0=0;MQRankSum=-9.694;QD=80.35;ReadPosRankSum=6.521;VQSLOD=1.5830;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,19:20:9.03:890,9,0	0/0:12,0:12:36.11:0,36,3877	0/0:30,0:30:90.27:0,90,5457	0/0:22,0:22:57.17:0,57,3475	0/0:33,0:33:96.32:0,96,13024	1/1:0,10:10:6.02:601,6,0	1/1:0,16:16:3.01:300,3,0	0/0:25,0:24:66.22:0,66,5263	0/0:21,0:21:60.21:0,60,8383	0/0:27,0:27:78.27:0,78,10822	0/0:16,0:16:48.15:0,48,6379	1/1:0,23:23:18.06:1803,18,0	1/1:0,12:12:21.07:2103,21,0	0/0:28,0:28:78.22:0,78,11281	0/0:39,0:39:99:0,111,16650	0/0:27,0:27:72.23:0,72,10639	0/0:41,0:41:99:0,117,16524	1/1:0,9:9:6.02:601,6,0	0/0:16,0:16:42.13:0,42,4179	0/0:30,0:30:81.22:0,81,10420	0/0:33,0:33:90.30:0,90,11705	1/1:1,8:9:9.03:901,9,0	1/1:0,13:13:18.06:1803,18,0	1/1:2,13:15:12.04:1202,12,0	0/0:34,0:34:99:0,99,13765	0/0:28,0:28:81.28:0,81,11226	0/0:26,0:26:63.22:0,63,8443	0/0:15,0:15:45.15:0,45,5955
chr10	51087502	.	CT	C	15269.59	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=17.533;DP=688;FS=1.632;HRun=1;HaplotypeScore=85.0783;InbreedingCoeff=0.9983;MQ=79.05;MQ0=0;MQRankSum=-2.306;QD=36.88;ReadPosRankSum=0.502;VQSLOD=5.1512;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,36:36:90.30:1257,90,0	1/1:0,9:9:24.08:335,24,0	0/0:17,0:15:37.09:0,37,439	0/0:18,0:17:18.12:0,18,363	0/0:27,0:27:81.23:0,81,1194	1/1:0,16:16:42.14:587,42,0	1/1:0,23:23:57.19:791,57,0	1/1:0,34:34:99:1294,99,0	0/0:21,0:21:63.21:0,63,985	0/0:26,0:26:75.25:0,75,1154	0/0:28,0:28:84.26:0,84,1290	1/1:0,15:15:33.11:461,33,0	1/1:1,23:24:60.20:839,60,0	0/0:36,1:37:69.43:0,69,1647	1/1:0,28:28:75.25:1048,75,0	1/1:0,19:19:54.18:754,54,0	0/0:24,0:24:72.21:0,72,1074	1/1:0,10:10:27.09:377,27,0	1/1:0,26:26:78.25:1073,78,0	1/1:1,37:38:99:1365,101,0	1/1:0,25:25:57.19:796,57,0	1/1:0,28:28:69.23:964,69,0	1/1:3,16:19:54.17:729,54,0	1/1:0,27:27:78.26:1091,78,0	0/0:41,0:41:99:0,123,1859	0/0:25,0:25:75.24:0,75,1150	1/1:0,37:37:99:1509,108,0	0/0:10,0:10:30.06:0,30,439
chr10	51087503	.	TC	T	5836	PASS	AB=0.803;AC=36;AF=0.643;AN=56;BaseQRankSum=19.970;DP=694;FS=6.521;HRun=3;HaplotypeScore=119.7693;InbreedingCoeff=0.8436;MQ=77.14;MQ0=0;MQRankSum=0.789;QD=12.85;ReadPosRankSum=0.117;VQSLOD=3.1394;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:36,0:36:87.36:502,87,0	1/1:9,0:9:23.06:122,23,0	0/1:12,3:13:43.42:43,0,269	0/1:12,5:16:99:141,0,121	0/0:26,0:26:78.25:0,78,1104	1/1:16,0:16:40.33:212,40,0	1/1:23,0:23:54.87:312,55,0	1/1:37,0:37:55.89:409,56,0	0/0:21,0:21:63.21:0,63,907	0/0:27,0:27:81.25:0,81,1120	0/0:28,0:28:84.28:0,84,1207	1/1:15,0:15:31.68:166,32,0	1/1:24,0:24:57.85:313,58,0	0/0:38,0:38:99:0,99,1567	1/1:30,0:30:28.47:341,28,0	1/1:19,0:19:51.81:270,52,0	0/0:24,0:24:69.22:0,69,974	1/1:10,0:10:26.05:144,26,0	1/1:28,0:28:52.57:396,53,0	1/1:39,1:40:52.87:508,53,0	1/1:25,0:25:55.02:307,55,0	1/1:28,0:28:66.55:369,67,0	1/1:18,0:18:49.05:285,49,0	1/1:27,0:27:74.93:396,75,0	0/0:40,0:40:99:0,117,1681	0/0:26,0:26:75.24:0,75,1063	1/1:37,0:37:99:600,105,0	0/0:10,0:10:27.07:0,27,370
chr10	51088540	.	AT	A	2682.94	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=10.335;DP=425;FS=1.967;HRun=7;HaplotypeScore=44.5224;InbreedingCoeff=0.8647;MQ=72.99;MQ0=0;MQRankSum=-0.294;QD=20.33;ReadPosRankSum=2.466;VQSLOD=3.0549;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,25:28:72.16:734,72,0	0/0:4,0:4:12.04:0,12,151	0/1:11,0:11:16.40:16,0,54	0/0:8,0:6:5.86:0,6,86	0/0:29,0:29:78.24:0,78,967	1/1:2,16:18:42.09:428,42,0	1/1:2,10:12:21.04:214,21,0	0/0:18,0:18:43.01:0,43,509	0/0:16,0:16:39.12:0,39,480	0/0:22,0:22:63.19:0,63,781	0/0:20,1:21:29.56:0,30,662	1/1:0,10:10:24.05:245,24,0	1/1:1,12:13:36.08:367,36,0	0/0:15,0:15:42.13:0,42,528	0/0:14,0:14:39.12:0,39,491	0/0:9,0:9:24.05:0,24,277	0/0:19,0:19:54.17:0,54,679	1/1:2,7:9:21.05:214,21,0	0/0:10,0:10:27.08:0,27,328	0/0:11,0:11:30.10:0,30,377	0/0:5,0:5:15.05:0,15,189	1/1:1,5:6:15.03:153,15,0	1/1:2,21:23:47.96:489,48,0	1/1:0,2:2:3.01:31,3,0	0/0:31,0:31:84.27:0,84,1057	0/0:20,0:20:54.17:0,54,679	0/0:36,0:34:99:0,99,1188	0/0:5,0:5:15.05:0,15,189
chr10	51090026	.	TTATC	T	2163.97	PASS	AB=1.000;AC=32;AF=0.640;AN=50;BaseQRankSum=1.123;DP=641;FS=0.000;HRun=0;HaplotypeScore=101.9803;InbreedingCoeff=0.6637;MQ=75.50;MQ0=4;MQRankSum=0.763;QD=5.61;ReadPosRankSum=2.202;VQSLOD=1.8376;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:9,7:16:3.01:46,3,0	1/1:6,0:6:5.99:51,6,0	./.	./.	0/1:29,0:29:34.68:35,0,221	1/1:27,0:27:2.97:20,3,0	1/1:22,0:21:8.97:71,9,0	./.	0/0:25,0:25:53.20:0,53,567	0/0:43,0:42:56.91:0,57,636	0/0:12,0:12:17.93:0,18,191	1/1:17,0:17:23.97:200,24,0	1/1:28,0:28:35.95:299,36,0	0/0:19,0:19:39.02:0,39,516	1/1:32,0:31:2.92:17,3,0	1/1:28,0:28:2.99:24,3,0	0/0:14,0:14:20.99:0,21,237	1/1:7,6:13:3.01:46,3,0	1/1:24,0:24:20.85:162,21,0	1/1:21,0:21:17.65:110,18,0	1/1:19,0:18:28.37:212,28,0	1/1:24,0:24:44.92:371,45,0	1/1:25,0:25:47.92:412,48,0	1/1:17,0:17:23.58:239,24,0	0/0:26,0:26:38.96:0,39,457	0/0:21,0:21:24.03:0,24,263	0/1:38,0:38:11.05:37,0,11	0/0:17,0:17:11.99:0,12,142
chr10	51090065	.	TCTATCTATCTATCTAC	T	1178.31	PASS	AB=1.000;AC=14;AF=0.269;AN=52;BaseQRankSum=5.986;DP=609;FS=0.000;HRun=0;HaplotypeScore=210.8713;InbreedingCoeff=0.4417;MQ=57.57;MQ0=11;MQRankSum=1.397;QD=4.89;ReadPosRankSum=-1.626;VQSLOD=2.4231;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:29.91:0,30,394	0/1:7,0:7:21.91:56,0,22	./.	./.	0/0:24,0:24:66.09:0,66,1742	0/1:26,0:26:17.98:53,0,18	0/1:20,0:16:17.83:165,0,18	0/0:31,0:27:3.05:0,3,144	0/0:31,0:31:93.17:0,93,2806	0/0:39,0:37:77.34:0,77,3023	0/0:13,0:12:33.10:0,33,1228	0/0:12,0:12:33.03:0,33,495	0/0:22,0:22:34.75:0,35,724	0/0:22,0:22:66.13:0,66,2358	1/1:0,40:40:3.01:107,3,0	1/1:2,32:34:6:158,6,0	0/0:15,0:15:42.12:0,42,1487	0/0:10,0:10:13.23:0,13,234	1/1:15,0:14:29.06:280,29,0	1/1:25,0:25:3.59:110,4,0	1/1:31,0:29:6.87:359,7,0	0/0:27,0:27:80.95:0,81,1199	0/0:20,0:20:4.16:0,4,910	0/0:21,0:21:26.70:0,27,838	0/0:24,0:24:69.16:0,69,2148	0/0:17,0:17:51.13:0,51,1588	0/1:43,0:43:49.87:50,0,84	0/0:16,0:16:42.08:0,42,1330
chr10	51090069	.	TCTATCTATCTAC	T	2699.23	PASS	AB=0.835;AC=21;AF=0.404;AN=52;BaseQRankSum=3.595;DP=613;FS=2.777;HRun=0;HaplotypeScore=181.9188;InbreedingCoeff=0.6579;MQ=57.54;MQ0=12;MQRankSum=2.725;QD=8.44;ReadPosRankSum=-1.989;VQSLOD=2.6372;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:29.87:0,30,294	1/1:7,0:7:21.03:259,21,0	./.	./.	0/0:22,0:22:59.58:0,60,1181	1/1:1,0:26:3.01:30,3,0	1/1:20,0:16:38.96:388,39,0	1/1:33,0:26:7.14:42,7,0	0/0:34,0:34:99:0,102,1993	0/0:40,0:38:77.28:0,77,2088	0/0:13,0:12:36.07:0,36,810	0/0:12,0:12:16.40:0,16,168	0/1:25,0:25:21.53:22,0,367	0/0:22,0:22:66.12:0,66,1675	1/1:40,0:39:3.01:61,3,0	1/1:33,0:32:6:111,6,0	0/0:15,0:15:42.07:0,42,1010	0/0:13,0:13:20.94:0,21,225	1/1:5,11:15:32.95:504,33,0	1/1:1,25:26:26.99:300,27,0	1/1:31,0:29:80.89:914,81,0	0/0:26,0:26:32.50:0,32,518	0/1:21,0:21:68.05:68,0,402	0/0:23,0:23:7.29:0,7,441	0/0:23,0:23:66.14:0,66,1526	0/0:18,0:18:54.11:0,54,1123	0/1:1,41:42:31.92:192,0,32	0/0:14,0:14:39.05:0,39,899
chr10	51090921	.	CAGT	C	7236.13	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=3.894;DP=616;FS=1.567;HRun=0;HaplotypeScore=103.1783;InbreedingCoeff=0.9974;MQ=74.67;MQ0=0;MQRankSum=-6.685;QD=46.39;ReadPosRankSum=4.353;VQSLOD=6.4759;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:84.29:0,84,1985	1/1:0,10:10:21.07:370,21,0	0/0:12,0:12:25.23:0,25,652	0/0:15,0:15:42.13:0,42,854	0/0:34,0:34:96.33:0,96,2243	0/0:24,0:24:69.23:0,69,1582	0/0:17,0:17:48.15:0,48,1059	1/1:1,20:21:60.21:1052,60,0	0/0:14,0:14:42.13:0,42,947	0/0:28,0:28:84.28:0,84,1919	0/0:33,0:33:96.33:0,96,2269	0/0:18,0:18:54.19:0,54,1276	0/0:38,0:38:99:0,114,2611	0/0:19,0:19:57.20:0,57,1343	1/1:1,20:21:51.17:899,51,0	1/1:0,27:27:72.25:1267,72,0	0/0:26,0:26:78.25:0,78,1796	0/0:16,0:16:48.16:0,48,1133	1/1:1,10:11:30.10:529,30,0	1/1:1,20:21:51.17:899,51,0	1/1:0,7:7:18.06:317,18,0	0/0:25,0:25:75.26:0,75,1772	0/0:24,0:24:66.23:0,66,1508	0/0:9,0:9:27.09:0,27,638	0/0:32,0:32:93.32:0,93,2199	0/0:29,0:29:87.30:0,87,2057	1/1:0,38:38:99:1902,108,0	0/0:19,0:19:57.20:0,57,1348
chr10	51091291	.	CA	C	2132.78	PASS	AB=0.743;AC=34;AF=0.607;AN=56;BaseQRankSum=8.750;DP=495;FS=2.958;HRun=14;HaplotypeScore=75.0781;InbreedingCoeff=0.3978;MQ=79.04;MQ0=1;MQRankSum=-0.798;QD=6.15;ReadPosRankSum=3.225;VQSLOD=2.8393;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,20:23:27.21:270,27,0	1/1:0,0:4:8.15:24,8,0	0/0:31,0:19:11.90:0,12,87	0/1:21,0:17:3.15:3,0,100	0/0:24,0:25:47.83:0,48,420	1/1:5,8:15:5.95:167,6,0	1/1:1,9:10:26.78:185,27,0	1/1:6,0:23:35.05:101,35,0	0/0:10,0:10:26.90:0,27,231	0/0:22,0:23:17.61:0,18,330	0/1:20,4:25:28.48:28,0,306	0/1:6,6:13:7.95:89,0,8	0/1:3,8:12:5.01:106,0,5	0/1:10,2:12:14.24:14,0,146	1/1:1,1:17:31.49:103,31,0	1/1:1,1:10:15.18:56,15,0	0/0:18,2:21:6.66:0,7,317	0/1:9,16:25:80.08:196,0,80	1/1:2,1:16:29.63:99,30,0	1/1:2,0:15:22.36:65,22,0	1/1:4,0:13:14.25:41,14,0	0/1:2,12:14:14:205,0,14	1/1:6,15:21:9.91:217,10,0	1/1:0,16:16:35.70:247,36,0	0/0:15,2:18:9.77:0,10,352	0/0:17,1:19:27.30:0,27,380	1/1:4,0:21:32.56:94,33,0	0/1:14,3:18:16.88:17,0,268
chr10	51091373	.	GCT	G	2020.88	PASS	AB=0.900;AC=37;AF=0.841;AN=44;BaseQRankSum=0.135;DP=477;FS=0.000;HRun=0;HaplotypeScore=90.7492;InbreedingCoeff=0.3480;MQ=57.35;MQ0=25;MQRankSum=0.049;QD=6.26;ReadPosRankSum=1.114;VQSLOD=2.9294;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:26:11.98:0,12,98	1/1:4,0:4:0.94:1,1,0	0/0:18,0:8:0:0,0,0	./.	1/1:17,0:17:26.87:206,27,0	./.	./.	./.	1/1:6,0:10:2.90:16,3,0	1/1:10,8:18:16.85:130,17,0	1/1:10,0:14:2.80:13,3,0	./.	1/1:17,0:16:31.80:227,32,0	1/1:19,0:19:23.89:185,24,0	1/1:11,0:11:12.86:88,13,0	1/1:7,0:8:11.20:80,11,0	1/1:24,1:22:28.05:220,28,0	1/1:21,0:19:16.91:113,17,0	1/1:15,0:16:20.71:148,21,0	1/1:12,0:15:23.89:185,24,0	1/1:13,0:10:3.87:26,4,0	./.	1/1:19,0:18:5.98:48,6,0	0/1:19,0:19:0:0,0,0	0/1:21,0:21:27.31:84,0,27	0/1:8,6:13:9.15:98,0,9	1/1:17,0:17:8.64:64,9,0	1/1:21,0:19:26.84:200,27,0
chr10	51091414	.	CTCTGTGTGTGTGTGTG	C	946.73	PASS	AB=0.961;AC=20;AF=0.400;AN=50;BaseQRankSum=-1.249;DP=464;FS=58.110;HRun=0;HaplotypeScore=177.9525;InbreedingCoeff=-0.0028;MQ=45.41;MQ0=36;MQRankSum=0.868;QD=3.22;ReadPosRankSum=-3.808;VQSLOD=-0.4493;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:29:11.95:0,12,205	0/0:10,0:8:14.91:0,15,544	./.	./.	0/1:23,0:23:54.31:54,0,623	0/0:16,0:12:6.02:0,6,121	0/1:18,0:12:4.25:4,0,209	0/0:22,0:16:33.01:0,33,1038	0/1:13,0:11:3.87:4,0,484	0/1:21,0:19:1.24:1,0,1221	0/0:16,0:15:5.12:0,5,726	./.	1/1:21,0:19:21.93:493,22,0	0/1:13,0:13:96.88:97,0,359	0/1:24,0:22:21.99:22,0,1491	0/0:12,0:11:10.26:0,10,971	0/1:22,0:19:17.39:17,0,1367	1/1:11,0:8:14.21:245,14,0	0/0:14,0:13:0.56:0,1,678	0/1:26,0:26:28.38:28,0,1119	0/0:12,0:8:15.05:0,15,700	0/1:2,15:17:0.12:0,0,0	1/1:16,0:14:5.71:60,6,0	1/1:6,12:17:0.47:1,0,0	0/1:20,0:20:5.29:5,0,1278	0/0:21,0:20:26.90:0,27,2278	0/1:13,0:12:10.80:11,0,455	0/1:18,0:15:48.37:48,0,882
chr10	51091416	.	CTGTGTGTGTGTGTG	C	274.38	PASS	AB=0.891;AC=8;AF=0.160;AN=50;BaseQRankSum=2.355;DP=471;FS=4.864;HRun=0;HaplotypeScore=172.1732;InbreedingCoeff=0.3836;MQ=45.23;MQ0=37;MQRankSum=-1.398;QD=2.66;ReadPosRankSum=0.366;VQSLOD=2.6354;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,14:28:9.13:0,9,98	0/0:9,0:7:15.05:0,15,552	./.	./.	0/0:20,0:23:24.04:0,24,754	0/0:18,0:13:9.03:0,9,200	0/1:18,0:14:1.31:1,0,286	0/0:23,0:17:36.02:0,36,1210	0/0:13,0:11:9.03:0,9,496	0/0:23,0:21:45:0,45,1594	0/0:17,0:16:15.05:0,15,736	./.	0/1:15,6:20:4.06:265,0,4	0/0:13,0:13:14.52:0,15,438	0/0:23,0:21:32.18:0,32,1551	0/0:13,0:12:21.07:0,21,964	0/0:22,0:19:40.36:0,40,1433	0/1:11,0:8:12.30:91,0,12	0/0:13,0:13:27.04:0,27,744	0/0:25,0:25:30.44:0,30,1188	0/0:13,0:8:15.05:0,15,699	0/1:15,0:17:0.06:0,0,0	1/1:12,3:13:2.55:15,3,0	1/1:18,0:17:0.47:1,0,0	0/0:20,0:20:31.51:0,32,1325	0/0:21,0:20:48.64:0,49,2295	0/0:14,0:13:17.89:0,18,656	0/0:18,0:15:29.12:0,29,965
chr10	51092851	.	AAAT	A	3437.17	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=10.256;DP=691;FS=1.004;HRun=0;HaplotypeScore=96.0242;InbreedingCoeff=0.9999;MQ=82.80;MQ0=0;MQRankSum=-6.075;QD=47.74;ReadPosRankSum=3.364;VQSLOD=5.9277;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:87.30:0,87,1997	1/1:0,14:14:39.13:687,39,0	0/0:25,0:25:72.25:0,72,1584	0/0:22,0:21:60.64:0,61,1363	0/0:26,0:26:75.25:0,75,1713	0/0:17,0:17:51.18:0,51,1206	0/0:24,0:24:72.24:0,72,1597	0/0:30,0:30:84.28:0,84,1886	0/0:26,0:26:78.25:0,78,1789	0/0:29,0:29:84.29:0,84,1987	0/0:21,0:21:63.22:0,63,1488	0/0:34,0:34:99:0,102,2368	0/0:28,0:28:81.27:0,81,1858	0/0:28,0:28:84.29:0,84,1941	1/1:2,35:37:93.32:1640,93,0	1/1:0,21:21:63.22:1110,63,0	0/0:25,0:25:69.22:0,69,1560	0/0:12,0:12:33.11:0,33,780	0/0:20,0:20:60.21:0,60,1411	0/0:35,0:35:99:0,105,2430	0/0:19,0:19:54.18:0,54,1201	0/0:28,0:28:84.29:0,84,1983	0/0:23,0:23:66.23:0,66,1527	0/0:32,0:32:93.23:0,93,2092	0/0:25,0:25:75.25:0,75,1727	0/0:26,0:26:78.27:0,78,1844	0/0:20,0:20:60.21:0,60,1403	0/0:15,0:15:45.15:0,45,1034
chr10	51094158	.	TA	T	5270.97	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=13.346;DP=405;FS=5.570;HRun=8;HaplotypeScore=77.7776;InbreedingCoeff=0.9412;MQ=68.65;MQ0=1;MQRankSum=-11.995;QD=24.40;ReadPosRankSum=-3.145;VQSLOD=4.2931;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,10:14:29.93:268,30,0	1/1:0,4:4:12.02:116,12,0	0/0:16,0:12:2.57:0,3,177	0/0:16,0:13:9.82:0,10,200	0/0:23,0:23:66.19:0,66,784	1/1:2,15:17:45.01:422,45,0	1/1:0,7:7:21.03:202,21,0	1/1:11,23:34:78.10:743,78,0	0/0:4,0:4:12.04:0,12,145	0/0:17,0:17:45.14:0,45,544	0/0:21,0:21:57.16:0,57,677	1/1:1,11:12:33.01:309,33,0	1/1:4,9:13:36.01:334,36,0	0/0:7,0:7:18.04:0,18,206	1/1:0,14:14:42:393,42,0	1/1:1,9:10:30.05:289,30,0	0/0:32,0:32:90.28:0,90,1087	1/1:6,8:13:24.01:224,24,0	1/1:2,13:15:39.06:376,39,0	1/1:2,21:23:65.99:615,66,0	1/1:4,2:6:11.99:106,12,0	1/1:0,4:4:12.02:116,12,0	1/1:1,7:8:23.98:218,24,0	1/1:0,5:5:12.02:116,12,0	0/0:19,0:19:48.13:0,48,566	0/0:23,0:23:57.17:0,57,680	1/1:2,14:16:45.02:424,45,0	0/0:11,0:11:30.09:0,30,362
chr10	51094181	.	A	AG	9234.10	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=15.412;DP=426;FS=5.143;HRun=0;HaplotypeScore=75.1504;InbreedingCoeff=0.9786;MQ=67.94;MQ0=1;MQRankSum=-12.053;QD=39.80;ReadPosRankSum=0.100;VQSLOD=5.2703;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,16:17:33.11:494,33,0	1/1:0,6:6:18.06:274,18,0	0/0:15,0:12:19.34:0,19,247	0/0:14,0:12:18.27:0,18,299	0/0:28,0:28:84.25:0,84,1126	1/1:1,15:16:45.02:613,45,0	1/1:0,7:7:21.07:319,21,0	1/1:5,23:28:78.18:1089,78,0	0/0:6,0:6:15.05:0,15,210	0/0:21,0:21:63.21:0,63,879	0/0:20,0:20:54.17:0,54,721	1/1:1,11:12:36.04:491,36,0	1/1:1,9:10:27.09:410,27,0	0/0:7,0:7:21.07:0,21,294	1/1:1,16:17:45.15:683,45,0	1/1:1,12:13:36.04:500,36,0	0/0:30,0:30:90.28:0,90,1239	1/1:0,15:14:39.13:595,39,0	1/1:1,21:22:63.17:919,63,0	1/1:0,24:24:72.24:1089,72,0	1/1:0,5:5:9.03:137,9,0	1/1:0,6:6:18.06:273,18,0	1/1:1,8:9:21.07:320,21,0	1/1:0,5:5:11.87:125,12,0	0/0:18,0:18:54.16:0,54,712	0/0:19,0:19:57.19:0,57,796	1/1:0,20:20:60.20:904,60,0	0/0:16,0:16:45.15:0,45,629
chr10	51094504	.	G	GAC	5496.47	PASS	AB=0.675;AC=11;AF=0.196;AN=56;BaseQRankSum=-13.252;DP=703;FS=4.681;HRun=0;HaplotypeScore=91.6057;InbreedingCoeff=-0.1382;MQ=69.88;MQ0=1;MQRankSum=-0.018;QD=18.20;ReadPosRankSum=1.025;VQSLOD=4.8232;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:19,34:53:99:1179,0,113	0/0:4,0:4:12.04:0,12,141	0/0:36,0:26:4.46:0,4,201	0/1:32,0:22:2.26:2,0,340	0/0:18,0:25:56.13:0,56,520	0/1:7,15:22:78.67:520,0,79	0/1:10,11:21:66.91:434,0,67	0/1:27,1:32:0.06:0,0,356	0/0:27,0:27:66.03:0,66,756	0/0:26,0:28:44.63:0,45,466	0/0:16,0:17:29.92:0,30,332	0/1:8,9:17:99:343,0,105	0/1:6,19:27:4.47:860,0,4	0/0:24,0:27:68.87:0,69,770	0/0:27,0:30:77.87:0,78,855	0/0:15,0:17:41.79:0,42,452	0/0:16,0:21:42.57:0,43,469	0/1:7,13:22:73.16:358,0,73	0/0:15,0:19:29.03:0,29,250	0/0:28,0:28:66.18:0,66,759	0/0:30,0:30:83.04:0,83,947	0/1:8,11:19:11.26:307,0,11	0/1:7,22:29:13.67:703,0,14	0/1:8,19:27:10.48:790,0,10	0/0:14,0:15:35.94:0,36,403	0/0:25,0:28:56.65:0,57,589	0/0:26,0:31:68.37:0,68,727	0/0:11,0:14:35.94:0,36,403
chr10	51097228	.	CTCTG	C	8602.06	PASS	AB=0.963;AC=35;AF=0.625;AN=56;BaseQRankSum=13.073;DP=607;FS=9.835;HRun=0;HaplotypeScore=152.8039;InbreedingCoeff=0.8893;MQ=65.96;MQ0=2;MQRankSum=-7.697;QD=22.46;ReadPosRankSum=-0.074;VQSLOD=4.0373;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,25:33:45.15:737,45,0	1/1:1,3:4:9.03:147,9,0	0/0:32,0:23:30.57:0,31,614	0/1:25,1:21:22.07:22,0,517	0/0:25,1:26:14.08:0,14,1330	1/1:2,15:17:36.12:589,36,0	1/1:7,13:20:21.07:344,21,0	1/1:15,31:47:96.23:1379,96,0	0/0:25,0:25:54.17:0,54,1267	0/0:25,0:25:60.21:0,60,1441	0/0:11,0:11:18.06:0,18,439	1/1:6,8:14:15:221,15,0	1/1:7,11:18:21.07:344,21,0	0/0:18,0:18:48.16:0,48,1171	1/1:10,24:34:66.23:1081,66,0	1/1:5,13:18:30.10:491,30,0	0/0:30,2:32:32.13:0,32,1808	1/1:6,5:11:15.05:246,15,0	1/1:6,10:16:30.09:468,30,0	1/1:5,17:22:47.89:783,48,0	1/1:19,7:26:15.05:243,15,0	1/1:6,6:12:9.03:148,9,0	1/1:8,9:17:18.06:290,18,0	1/1:4,10:14:11.78:187,12,0	0/0:13,0:13:30.10:0,30,732	0/0:33,0:33:63.22:0,63,1532	1/1:16,17:33:54.18:881,54,0	0/0:9,0:9:24.08:0,24,585
chr10	51097295	.	G	GTC	913.25	PASS	AB=0.741;AC=12;AF=0.222;AN=54;BaseQRankSum=7.876;DP=627;FS=0.743;HRun=0;HaplotypeScore=189.5673;InbreedingCoeff=0.7451;MQ=47.13;MQ0=19;MQRankSum=-7.358;QD=5.74;ReadPosRankSum=0.589;VQSLOD=3.2348;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:24,13:34:2.30:8,2,0	0/0:8,0:8:15.05:0,15,203	0/0:10,0:6:15.05:0,15,213	0/0:16,0:12:14.32:0,14,170	0/0:27,0:27:66.20:0,66,924	1/1:17,6:23:9.01:97,9,0	1/1:8,5:12:9.01:125,9,0	0/0:41,0:34:84.43:0,84,1111	0/0:29,0:29:72.07:0,72,1024	0/0:18,0:18:54.14:0,54,749	0/0:13,0:12:14.38:0,14,213	1/1:9,7:16:15.05:226,15,0	1/1:11,11:22:26.97:410,27,0	0/0:17,0:16:42.14:0,42,599	0/0:36,0:36:57.58:0,58,734	0/0:14,0:12:21.07:0,21,294	0/0:30,0:29:84.24:0,84,1200	0/1:12,2:14:38.62:202,0,39	0/0:24,0:19:51.17:0,51,699	0/0:28,0:26:44.85:0,45,625	0/0:31,0:28:30.03:0,30,405	./.	0/0:17,9:24:0.46:0,0,1	0/1:12,22:33:0.01:0,0,0	0/0:22,0:22:51.17:0,51,726	0/0:28,0:27:72.11:0,72,937	0/0:25,0:21:54.18:0,54,758	0/0:6,0:6:18.05:0,18,229
chr10	51097297	.	CTG	C	627.65	PASS	AB=0.967;AC=10;AF=0.179;AN=56;BaseQRankSum=8.006;DP=633;FS=0.738;HRun=0;HaplotypeScore=186.7711;InbreedingCoeff=0.6460;MQ=47.24;MQ0=20;MQRankSum=-6.610;QD=6.61;ReadPosRankSum=1.283;VQSLOD=3.3993;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,5:34:5.50:0,5,17	0/0:7,0:7:15.05:0,15,289	0/0:9,0:6:15.05:0,15,255	0/0:16,0:11:14.15:0,14,162	0/0:29,0:29:66.05:0,66,1149	1/1:12,11:23:9.03:120,9,0	1/1:10,3:12:9.01:119,9,0	0/0:41,0:34:87.49:0,87,1403	0/0:30,0:30:75.08:0,75,1357	0/0:18,0:18:54.18:0,54,947	0/0:13,0:12:13.43:0,13,271	1/1:16,1:17:14.77:143,15,0	1/1:19,3:22:18.43:262,18,0	0/0:17,0:16:42.14:0,42,785	0/0:39,0:39:64.44:0,64,1109	0/0:17,0:14:24.53:0,25,384	0/0:30,0:29:84.76:0,85,1582	0/1:13,1:14:54.27:134,0,54	0/0:23,0:18:51.17:0,51,890	0/0:29,0:27:47.62:0,48,820	0/0:31,0:28:31.78:0,32,592	0/0:16,1:17:1.90:0,2,6	0/0:23,3:24:1.57:0,2,6	0/0:33,1:33:1.61:0,2,6	0/0:23,0:23:57.18:0,57,1024	0/0:26,0:25:75.25:0,75,1273	0/0:25,0:21:54.18:0,54,971	0/1:6,0:6:1.15:1,0,215
chr10	51097299	.	G	GTC	668.85	PASS	AB=0.910;AC=12;AF=0.222;AN=54;BaseQRankSum=8.268;DP=635;FS=0.750;HRun=0;HaplotypeScore=188.6190;InbreedingCoeff=0.7347;MQ=47.22;MQ0=23;MQRankSum=-7.748;QD=4.10;ReadPosRankSum=0.615;VQSLOD=2.6982;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:33,5:34:2.34:8,2,0	0/0:7,0:7:12.04:0,12,172	0/0:7,0:6:14.94:0,15,178	0/0:11,0:8:9.26:0,9,99	0/0:27,0:27:63.17:0,63,860	1/1:19,5:24:8.67:96,9,0	1/1:11,3:13:8.97:85,9,0	0/0:42,0:35:79.23:0,79,1000	0/0:30,0:30:75.01:0,75,1039	0/0:19,0:19:48.16:0,48,686	0/0:13,0:12:14.38:0,14,214	1/1:17,0:17:14.90:147,15,0	1/1:17,4:21:26.97:320,27,0	0/0:18,0:17:42.14:0,42,599	0/0:39,0:39:64.10:0,64,805	0/0:19,0:15:24.35:0,24,303	0/0:31,0:30:81.26:0,81,1160	0/1:12,2:14:37.15:168,0,37	0/0:24,0:19:51.09:0,51,655	0/0:28,0:26:44.33:0,44,583	0/0:32,0:28:33.02:0,33,427	./.	0/0:20,6:24:0.46:0,0,1	0/1:33,2:33:0.01:0,0,0	0/0:22,0:22:57.18:0,57,794	0/0:25,0:24:69.22:0,69,958	0/0:26,0:22:54.17:0,54,751	0/0:6,0:6:16.85:0,17,202
chr10	51097307	.	GTC	G	698.71	PASS	AB=0.922;AC=21;AF=0.389;AN=54;BaseQRankSum=6.290;DP=659;FS=9.724;HRun=0;HaplotypeScore=179.1719;InbreedingCoeff=-0.0669;MQ=46.28;MQ0=25;MQRankSum=-1.084;QD=1.62;ReadPosRankSum=-1.357;VQSLOD=1.7677;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:31,5:34:5.04:27,0,5	0/0:4,0:7:11.99:0,12,103	./.	0/0:6,0:4:0.89:0,1,2	0/1:25,2:27:4.57:5,0,306	1/1:13,12:25:15.03:156,15,0	1/1:8,6:13:2.98:26,3,0	0/1:40,0:33:4.48:4,0,173	0/0:31,2:33:56.70:0,57,711	0/1:17,1:18:4.84:5,0,251	0/0:12,6:17:23.54:0,24,311	1/1:8,1:18:8.90:72,9,0	1/1:16,3:21:9.32:138,9,0	0/0:16,5:20:4.49:0,4,491	0/1:34,0:39:99:136,0,309	0/1:20,0:19:43.30:43,0,165	0/0:34,1:34:6.73:0,7,700	0/1:6,0:15:6.55:44,0,7	0/1:25,1:23:7.06:7,0,170	0/1:26,0:28:29.33:29,0,139	0/1:17,3:31:44.57:45,0,127	0/0:10,1:18:2.04:0,2,6	0/0:18,2:24:1.70:0,2,6	0/0:30,4:33:1.71:0,2,6	0/0:19,3:22:15.92:0,16,536	0/1:23,3:25:30.37:30,0,393	0/1:23,0:23:45.66:46,0,321	0/1:5,1:6:39.25:39,0,83
chr10	51097309	.	C	CTG	1304.68	PASS	AB=0.971;AC=21;AF=0.389;AN=54;BaseQRankSum=9.591;DP=662;FS=3.522;HRun=0;HaplotypeScore=182.9029;InbreedingCoeff=0.1725;MQ=46.28;MQ0=25;MQRankSum=-2.210;QD=3.20;ReadPosRankSum=1.320;VQSLOD=2.6391;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:35,2:33:5.49:51,5,0	0/1:7,0:7:34.62:35,0,95	./.	0/0:6,0:4:0.89:0,1,2	0/0:26,0:26:28.41:0,28,588	1/1:26,0:26:15:149,15,0	1/1:15,0:14:5.50:42,6,0	0/0:39,0:32:5.74:0,6,319	0/0:31,0:31:72.10:0,72,922	0/0:19,0:18:41.16:0,41,465	0/0:20,0:19:27.50:0,28,334	1/1:18,1:18:14.85:137,15,0	1/1:18,4:22:26.18:303,26,0	0/0:21,0:20:50.82:0,51,638	0/1:41,1:41:26.36:294,0,26	0/1:23,0:19:24.77:25,0,163	0/0:36,0:35:76.91:0,77,1096	0/1:12,2:14:23.57:124,0,24	0/1:26,0:22:55.78:56,0,179	0/1:31,0:30:80.75:81,0,153	0/1:35,1:32:99:111,0,122	0/1:17,2:18:0:0,0,0	0/0:19,5:22:0.46:0,0,1	0/1:35,2:34:0.14:0,0,0	0/0:22,0:22:56.29:0,56,695	0/1:27,0:26:4.71:5,0,601	0/1:27,0:23:57.15:57,0,279	0/0:6,0:6:16.67:0,17,163
chr10	51097435	.	ACACG	A	5040.69	PASS	AB=1.000;AC=18;AF=0.321;AN=56;BaseQRankSum=9.331;DP=753;FS=0.799;HRun=0;HaplotypeScore=143.9352;InbreedingCoeff=0.8220;MQ=54.51;MQ0=7;MQRankSum=0.200;QD=19.02;ReadPosRankSum=1.070;VQSLOD=4.4707;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:66.07:0,66,1332	1/1:2,7:9:21.07:356,21,0	0/0:30,0:15:11.04:0,11,125	0/0:27,0:12:9.02:0,9,148	0/0:32,0:32:68.95:0,69,1259	0/1:25,0:25:20.79:21,0,474	0/1:30,0:29:99:130,0,291	1/1:11,15:24:44.94:441,45,0	0/0:26,0:26:57.03:0,57,1136	0/0:30,0:30:57.19:0,57,1519	0/0:22,0:22:54.01:0,54,1020	0/0:23,0:23:47.97:0,48,796	0/0:24,0:24:41.88:0,42,676	0/0:22,0:22:48.04:0,48,972	1/1:7,23:29:45.15:746,45,0	1/1:5,17:22:39.12:635,39,0	0/0:17,0:17:42.06:0,42,854	0/0:28,0:28:37.16:0,37,1119	1/1:12,16:24:44.94:526,45,0	1/1:7,22:29:39.13:659,39,0	1/1:12,25:37:39.13:661,39,0	0/0:19,0:19:45.08:0,45,918	0/0:29,0:29:68.77:0,69,1338	0/0:49,0:49:80.89:0,81,1464	0/0:31,0:31:65.96:0,66,1196	0/0:32,0:32:64.48:0,64,1425	1/1:4,24:27:51.17:865,51,0	0/0:12,0:12:32.98:0,33,606
chr10	51097747	.	TAA	T	2488.54	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=9.684;DP=440;FS=8.714;HRun=10;HaplotypeScore=64.2983;InbreedingCoeff=0.9831;MQ=71.92;MQ0=0;MQRankSum=-1.497;QD=24.64;ReadPosRankSum=3.109;VQSLOD=2.8091;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,20:23:56.87:613,57,0	0/0:8,0:8:24.05:0,24,354	0/0:12,0:11:21.02:0,21,287	0/0:7,0:7:8.99:0,9,99	0/0:24,0:24:66.22:0,66,1025	0/0:3,0:19:43.40:0,43,175	0/0:2,0:13:27.32:0,27,94	0/0:36,0:36:99:0,99,1491	0/0:13,0:13:36.11:0,36,549	0/0:14,0:14:36.12:0,36,571	0/0:12,0:12:33.11:0,33,524	1/1:1,14:15:36.09:401,36,0	1/1:0,8:8:15.03:167,15,0	0/0:18,0:19:54.17:0,54,803	0/0:11,0:11:33.11:0,33,524	0/0:26,0:26:78.26:0,78,1216	0/0:21,0:21:60.20:0,60,949	1/1:1,14:15:39.10:435,39,0	0/0:9,0:10:26.57:0,27,365	0/0:22,0:22:54.08:0,54,701	0/0:8,0:8:21.07:0,21,315	1/1:1,14:15:36.09:401,36,0	1/1:0,13:13:33.08:367,33,0	1/1:3,9:12:27.07:301,27,0	0/0:16,0:16:47.94:0,48,706	0/0:23,0:24:62.68:0,63,919	0/0:16,0:16:39.07:0,39,542	0/0:8,0:8:21.07:0,21,323
chr10	51098712	.	AT	A	1454.62	PASS	AB=1.000;AC=18;AF=0.321;AN=56;BaseQRankSum=0.635;DP=382;FS=7.139;HRun=6;HaplotypeScore=70.0607;InbreedingCoeff=0.7553;MQ=74.50;MQ0=1;MQRankSum=1.849;QD=14.55;ReadPosRankSum=1.660;VQSLOD=2.9832;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,13:15:39.09:419,39,0	0/0:6,0:6:13.97:0,14,73	0/1:12,0:10:18.53:19,0,54	0/0:11,0:7:2.89:0,3,17	0/0:23,0:23:66.16:0,66,810	0/1:15,0:15:14.90:15,0,37	1/1:4,0:4:2.49:7,2,0	0/0:28,0:28:69.11:0,69,431	0/0:4,0:4:12.03:0,12,143	0/0:17,0:17:45.13:0,45,567	0/0:18,0:18:54.16:0,54,695	1/1:2,8:10:24.06:258,24,0	1/1:2,8:10:15.04:161,15,0	0/0:8,0:8:21:0,21,216	0/0:6,0:6:14.68:0,15,96	0/0:9,0:9:23.03:0,23,140	0/0:28,0:28:72.21:0,72,919	1/1:0,12:12:33.04:341,33,0	0/0:29,0:29:70.49:0,70,487	0/0:25,0:25:66.38:0,66,395	0/0:7,0:7:20.55:0,21,128	1/1:1,6:7:17.96:168,18,0	1/1:3,7:10:17.95:167,18,0	1/1:0,5:5:9.02:97,9,0	0/0:19,0:19:51.15:0,51,644	0/0:16,0:16:45.13:0,45,566	0/0:21,0:20:51.63:0,52,318	0/0:7,0:7:15.05:0,15,197
chr10	51098718	.	TAA	T	3487.66	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=8.031;DP=361;FS=2.953;HRun=9;HaplotypeScore=67.0194;InbreedingCoeff=0.9381;MQ=71.70;MQ0=2;MQRankSum=-4.391;QD=28.59;ReadPosRankSum=-0.895;VQSLOD=3.6387;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:42.07:0,42,420	1/1:0,6:6:15.04:175,15,0	0/0:13,0:7:12:0,12,137	0/0:12,0:7:14.26:0,14,116	0/0:22,0:22:57.19:0,57,933	0/0:2,0:17:32.44:0,32,114	0/0:0,0:4:7.32:0,7,26	1/1:2,24:26:72.11:803,72,0	0/0:4,0:4:12.04:0,12,196	0/0:15,0:15:42.14:0,42,688	0/0:18,0:18:51.17:0,51,834	0/0:8,0:8:24.05:0,24,244	0/0:9,0:9:18.03:0,18,194	0/0:7,0:7:15.05:0,15,244	1/1:1,4:5:12.03:140,12,0	1/1:2,6:8:18.05:207,18,0	0/0:26,0:26:75.25:0,75,1201	0/0:12,0:12:33.05:0,33,328	1/1:4,22:26:60.16:699,60,0	1/1:4,19:23:60.17:698,60,0	1/1:0,8:8:21.06:245,21,0	0/0:6,0:6:12.03:0,12,124	0/0:7,0:7:11.92:0,12,122	0/0:5,0:5:9.02:0,9,91	0/0:17,0:17:48.16:0,48,765	0/0:15,0:15:39.13:0,39,617	1/1:2,18:20:45.13:522,45,0	0/0:7,0:7:18.06:0,18,293
chr10	51099390	.	AAC	A	725.44	PASS	AB=0.886;AC=31;AF=0.646;AN=48;BaseQRankSum=5.798;DP=526;FS=3.392;HRun=0;HaplotypeScore=89.1697;InbreedingCoeff=-0.1352;MQ=68.51;MQ0=10;MQRankSum=-2.445;QD=1.87;ReadPosRankSum=0.518;VQSLOD=1.8392;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:32:5.68:28,6,0	1/1:4,0:8:11.36:56,11,0	./.	./.	0/1:14,2:15:14.93:53,0,15	1/1:17,0:23:16.34:74,16,0	0/1:16,0:22:3.72:41,0,4	./.	0/1:15,1:16:14.21:14,0,162	0/1:24,0:25:16.93:17,0,52	0/1:15,1:16:26.22:26,0,38	1/1:12,0:19:5.68:28,6,0	1/1:10,0:12:5.68:28,6,0	0/1:13,1:14:20.20:20,0,112	0/1:27,3:30:28.40:28,0,344	0/0:19,0:19:21.06:0,21,288	0/1:16,3:18:72.64:73,0,197	1/1:3,0:7:5.68:28,6,0	./.	0/1:15,3:19:35.22:55,0,35	0/1:28,3:31:52.44:53,0,52	1/1:15,0:18:1.13:3,1,0	1/1:7,0:16:6.15:29,6,0	0/0:12,0:14:2.97:0,3,20	0/0:18,0:18:6.01:0,6,67	1/1:14,3:18:7.84:59,8,0	1/1:10,4:14:8.69:78,9,0	0/1:8,3:10:61.72:82,0,62
chr10	51099944	.	TAAAA	T	2534.70	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=6.368;DP=409;FS=0.000;HRun=15;HaplotypeScore=77.8644;InbreedingCoeff=0.9109;MQ=67.02;MQ0=1;MQRankSum=-4.407;QD=25.35;ReadPosRankSum=4.705;VQSLOD=2.8083;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,9:12:27.09:368,27,0	0/0:8,0:8:21.07:0,21,468	0/0:21,0:8:15.03:0,15,191	0/1:11,0:6:3.93:4,0,63	0/0:16,0:21:58.41:0,58,1124	0/0:4,0:21:37.29:0,37,305	0/0:3,0:11:20.56:0,21,139	0/0:26,0:26:54.14:0,54,1069	0/0:7,0:8:21.07:0,21,460	0/0:11,0:17:36.12:0,36,717	0/0:7,0:8:24.08:0,24,491	1/1:7,15:22:51.07:693,51,0	1/1:3,6:10:21:269,21,0	0/0:9,0:10:21.07:0,21,390	0/0:10,0:12:30.09:0,30,566	0/0:14,0:16:42.14:0,42,905	0/0:10,0:10:21.07:0,21,477	1/1:3,9:12:27.03:368,27,0	0/0:22,0:25:60.20:0,60,1229	0/0:13,0:17:42.03:0,42,735	0/0:5,0:5:9.03:0,9,155	1/1:2,9:11:33.11:434,33,0	1/1:4,10:15:37.13:439,37,0	1/1:2,5:7:12:157,12,0	0/0:12,0:14:39.13:0,39,770	0/0:21,0:25:57.17:0,57,1046	0/0:16,0:16:39.05:0,39,799	0/0:14,0:14:36.11:0,36,692
chr10	51100003	.	GTGCTTGCT	G	4402.99	PASS	AC=12;AF=0.222;AN=54;BaseQRankSum=10.483;DP=415;FS=1.772;HRun=0;HaplotypeScore=113.3929;InbreedingCoeff=0.9502;MQ=72.60;MQ0=0;MQRankSum=-11.081;QD=56.45;ReadPosRankSum=0.999;VQSLOD=4.7855;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,13:16:30.10:772,30,0	0/0:11,0:11:30.10:0,30,1243	0/0:16,0:16:44.52:0,45,1533	0/0:14,0:13:30.02:0,30,835	0/0:25,0:24:72.25:0,72,2961	0/0:12,0:12:21.07:0,21,874	0/0:6,0:6:15.05:0,15,643	0/0:36,0:36:78.25:0,78,3016	0/0:10,0:10:30.10:0,30,1265	0/0:29,0:29:78.27:0,78,3294	0/0:26,0:26:75.26:0,75,3191	1/1:1,10:11:24.08:611,24,0	1/1:3,7:10:21.07:538,21,0	0/0:4,0:4:12.04:0,12,419	0/0:6,0:6:18.06:0,18,771	0/0:7,0:7:21.07:0,21,874	0/0:12,0:12:33.11:0,33,1403	1/1:4,8:12:24.08:611,24,0	0/0:23,0:22:57.20:0,57,2326	0/0:24,0:24:63.22:0,63,2614	0/0:2,0:2:3.01:0,3,129	1/1:1,10:11:30.10:771,30,0	1/1:3,15:18:42.14:1100,42,0	./.	0/0:9,0:9:27.09:0,27,1157	0/0:15,0:15:42.14:0,42,1788	0/0:22,0:22:63.22:0,63,2657	0/0:25,0:25:66.23:0,66,2808
chr10	51100473	.	T	TTTTTC	11956.37	PASS	AB=0.588;AC=33;AF=0.589;AN=56;BaseQRankSum=7.523;DP=612;FS=6.308;HRun=0;HaplotypeScore=124.9182;InbreedingCoeff=0.8602;MQ=51.37;MQ0=8;MQRankSum=-6.017;QD=29.89;ReadPosRankSum=0.912;VQSLOD=4.0204;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,0:37:72.03:1048,72,0	0/1:3,7:10:36.70:378,0,37	0/0:7,0:4:9:0,9,118	0/0:4,0:3:3.01:0,3,55	0/0:25,0:25:38.92:0,39,667	1/1:4,11:18:17.08:538,17,0	1/1:4,13:20:33.04:790,33,0	1/1:18,21:43:4.22:1158,4,0	0/0:21,0:20:48.09:0,48,805	0/0:24,0:23:51.03:0,51,750	0/0:21,0:21:45.10:0,45,726	1/1:2,0:15:30.10:490,30,0	1/1:4,0:19:33.11:538,33,0	0/0:27,0:27:60.03:0,60,930	1/1:3,14:18:30.08:746,30,0	1/1:5,16:24:24.01:669,24,0	0/0:28,0:27:66.12:0,66,1089	1/1:3,0:17:24.08:369,24,0	1/1:11,19:31:39.21:1013,39,0	1/1:2,21:26:45.08:1091,45,0	1/1:9,5:12:9.05:293,9,0	1/1:2,0:27:36.11:589,36,0	1/1:3,0:21:32.90:517,33,0	1/1:3,0:19:30.09:472,30,0	0/0:18,0:18:39.12:0,39,665	0/0:27,0:27:42.03:0,42,618	1/1:14,16:32:36.19:1259,36,0	0/0:10,0:10:15.04:0,15,244
chr10	51100945	.	TAA	T	2915.95	PASS	AB=1.000;AC=34;AF=0.607;AN=56;BaseQRankSum=11.222;DP=398;FS=0.425;HRun=12;HaplotypeScore=60.3070;InbreedingCoeff=0.8336;MQ=56.48;MQ0=20;MQRankSum=-0.053;QD=12.30;ReadPosRankSum=3.449;VQSLOD=1.7115;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,18:22:34.88:508,35,0	0/1:6,0:6:12.61:24,0,13	0/0:5,0:4:8.98:0,9,109	0/1:5,0:3:1.74:2,0,56	0/0:28,0:27:54.13:0,54,764	1/1:2,0:12:24.70:108,25,0	1/1:2,0:3:5.49:24,5,0	1/1:5,0:16:16.88:95,17,0	0/0:10,0:10:27.01:0,27,353	0/0:14,0:13:35.59:0,36,467	0/0:14,0:12:33.10:0,33,473	1/1:2,4:6:9.01:92,9,0	1/1:3,14:16:36.03:366,36,0	0/0:13,0:13:36.08:0,36,512	1/1:15,0:12:14.56:52,15,0	1/1:14,0:14:13:90,13,0	0/0:22,0:22:66.20:0,66,933	1/1:3,18:22:40.39:484,40,0	1/1:1,0:8:17.71:74,18,0	1/1:4,0:16:35.67:154,36,0	1/1:0,0:5:8.23:36,8,0	1/1:1,10:12:32.81:317,33,0	1/1:3,11:14:23.81:243,24,0	1/1:4,9:13:27.05:275,27,0	0/0:21,0:20:45.10:0,45,626	0/0:14,0:14:35.47:0,35,482	1/1:3,0:21:43.91:190,44,0	0/0:18,0:17:45.15:0,45,661
chr10	51100953	.	AAAAAG	A	1094.32	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=2.916;DP=385;FS=2.311;HRun=0;HaplotypeScore=88.8709;InbreedingCoeff=0.7765;MQ=57.90;MQ0=7;MQRankSum=0.491;QD=25.45;ReadPosRankSum=2.608;VQSLOD=3.5234;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:62.90:0,63,663	1/1:2,4:6:12.02:223,12,0	0/0:5,0:4:12.04:0,12,256	0/0:5,0:3:9.03:0,9,163	0/0:25,0:24:57.18:0,57,1540	0/1:13,0:13:5.52:22,0,6	0/0:7,0:6:3.41:0,3,53	0/0:20,0:18:48.98:0,49,345	0/0:11,0:11:30.09:0,30,748	0/0:14,0:13:36.12:0,36,969	0/0:14,0:14:36.11:0,36,962	0/0:6,0:6:15.04:0,15,203	0/0:16,0:15:39.09:0,39,424	0/0:15,0:15:42.12:0,42,1041	1/1:2,8:9:18.06:329,18,0	1/1:2,12:14:36.11:665,36,0	0/0:23,0:23:66.21:0,66,1728	0/0:22,0:22:54.13:0,54,584	0/0:9,0:9:25.79:0,26,156	0/0:16,0:16:42.38:0,42,230	0/0:5,0:5:8.39:0,8,39	0/0:11,0:11:32.87:0,33,328	0/0:13,0:13:30.06:0,30,351	0/0:12,0:12:32.44:0,32,352	0/0:17,0:17:45.15:0,45,1234	0/0:14,0:14:42.13:0,42,1013	0/0:22,0:21:53.67:0,54,308	0/0:17,0:16:45.15:0,45,1253
chr10	51101228	.	T	TTG	4635.08	PASS	AB=0.646;AC=15;AF=0.268;AN=56;BaseQRankSum=-10.742;DP=543;FS=0.000;HRun=0;HaplotypeScore=88.9508;InbreedingCoeff=0.4332;MQ=62.03;MQ0=7;MQRankSum=0.026;QD=20.97;ReadPosRankSum=-0.469;VQSLOD=4.9798;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:21:24.38:0,24,134	1/1:5,0:5:3.01:47,3,0	0/0:19,0:11:6.01:0,6,68	0/0:21,0:17:32.34:0,32,306	0/0:28,0:29:62.99:0,63,696	1/1:8,12:20:1.05:481,1,0	0/1:7,9:16:13.21:263,0,13	0/1:21,11:32:28.21:486,0,28	0/0:14,0:14:36.08:0,36,399	0/0:16,0:18:29.72:0,30,296	0/0:16,0:16:27.08:0,27,317	0/0:4,0:21:51.13:0,51,252	0/0:8,0:25:56.72:0,57,277	0/0:19,0:19:33.10:0,33,387	0/1:10,17:27:80.04:518,0,80	1/1:3,20:23:31.33:735,31,0	0/0:8,0:9:20.88:0,21,213	0/0:1,0:13:25.57:0,26,126	1/1:12,11:23:9.33:430,9,0	0/1:4,12:16:34.27:398,0,34	1/1:3,20:23:48.12:753,48,0	0/0:4,0:15:25.47:0,25,124	0/0:3,0:12:25.57:0,26,126	0/0:2,0:12:19.89:0,20,98	0/0:16,0:18:47.95:0,48,529	0/0:26,0:25:48.12:0,48,545	0/1:17,17:34:28.20:524,0,28	0/0:14,0:14:33.10:0,33,387
chr10	51101406	.	AT	A	9434.75	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=16.250;DP=521;FS=2.071;HRun=6;HaplotypeScore=81.1075;InbreedingCoeff=0.9745;MQ=69.21;MQ0=0;MQRankSum=-0.197;QD=27.75;ReadPosRankSum=0.671;VQSLOD=5.3970;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,21:24:63.15:675,63,0	1/1:0,7:7:18.05:193,18,0	0/0:5,0:5:6.02:0,6,79	0/0:7,0:7:9.50:0,10,82	0/0:23,0:23:69.21:0,69,893	1/1:0,16:16:48.12:516,48,0	1/1:0,14:14:42.11:451,42,0	1/1:5,28:33:84.19:887,84,0	0/0:9,0:9:27.07:0,27,340	0/0:24,0:24:63.20:0,63,827	0/0:27,0:27:72.23:0,72,947	1/1:0,19:19:51.13:548,51,0	1/1:5,19:24:57.14:612,57,0	0/0:24,0:24:33.94:0,34,779	1/1:2,18:20:54.14:580,54,0	1/1:1,14:15:42.11:451,42,0	0/0:17,0:17:45.15:0,45,590	1/1:0,12:12:24.02:243,24,0	1/1:2,22:24:66.15:698,66,0	1/1:1,20:21:54.13:580,54,0	1/1:0,21:21:54.14:580,54,0	1/1:1,20:21:54.14:580,54,0	1/1:1,15:16:42.11:451,42,0	1/1:2,23:25:60.15:645,60,0	0/0:19,0:19:51.17:0,51,671	0/0:20,0:20:60.17:0,60,757	1/1:1,27:28:69.17:741,69,0	0/0:6,0:6:18.06:0,18,237
chr10	51104988	.	AT	A	3463.16	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=15.717;DP=562;FS=5.145;HRun=9;HaplotypeScore=66.5581;InbreedingCoeff=0.9918;MQ=68.60;MQ0=0;MQRankSum=-0.847;QD=21.38;ReadPosRankSum=-1.230;VQSLOD=3.9667;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:78.21:0,78,883	1/1:0,13:13:36.02:330,36,0	0/0:11,0:10:19.15:0,19,188	0/0:9,0:9:11.98:0,12,106	0/0:23,0:23:48.09:0,48,606	0/0:22,0:22:57.16:0,57,650	0/0:19,0:19:51.14:0,51,577	1/1:9,12:21:36.01:329,36,0	0/0:17,0:17:42.12:0,42,485	0/0:21,0:21:57.17:0,57,655	0/0:23,2:25:17.26:0,17,688	0/0:24,0:24:63.19:0,63,727	0/0:18,0:18:51.11:0,51,573	0/0:14,0:14:41.91:0,42,463	1/1:2,13:15:42.17:369,42,0	1/1:1,22:23:60.03:548,60,0	0/0:34,0:34:87.26:0,87,1004	0/0:11,0:11:30.09:0,30,346	1/1:2,16:18:47.35:395,47,0	1/1:8,19:27:57.17:506,57,0	1/1:2,22:24:57.03:521,57,0	0/0:17,0:17:45.12:0,45,509	0/0:17,0:17:33.09:0,33,371	0/0:24,0:25:59.22:0,59,709	0/0:27,0:27:75.20:0,75,841	0/0:27,0:27:75.19:0,75,840	1/1:3,18:21:51.03:465,51,0	0/0:10,0:10:27.08:0,27,311
chr10	51107551	.	AT	A	2935.78	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=10.950;DP=361;FS=0.000;HRun=7;HaplotypeScore=32.6655;InbreedingCoeff=0.9440;MQ=68.69;MQ0=0;MQRankSum=-0.413;QD=25.31;ReadPosRankSum=-1.875;VQSLOD=2.6378;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:45.14:0,45,566	1/1:0,3:3:9.02:92,9,0	0/0:7,0:7:18.06:0,18,227	0/0:6,0:5:5.52:0,6,67	0/0:30,0:30:84.27:0,84,1057	0/0:17,0:17:48.15:0,48,604	0/0:5,0:5:12.04:0,12,151	1/1:2,32:34:96.19:966,96,0	0/0:15,0:15:42.13:0,42,528	0/0:17,0:17:48.15:0,48,600	0/0:17,0:17:51.15:0,51,629	0/0:6,0:6:18.04:0,18,213	0/0:8,0:8:24.08:0,24,302	0/0:7,0:7:21.07:0,21,264	1/1:0,8:8:24.05:245,24,0	1/1:0,6:6:15.03:153,15,0	0/0:19,0:19:42.10:0,42,511	0/0:20,0:20:51.12:0,51,624	1/1:3,15:18:45.09:459,45,0	1/1:3,23:26:69.15:704,69,0	1/1:2,6:8:18.04:184,18,0	0/0:3,0:3:9.03:0,9,113	0/0:6,0:6:18.04:0,18,213	0/0:6,0:6:15.05:0,15,189	0/0:12,0:12:33.11:0,33,415	0/0:19,0:19:51.16:0,51,642	1/1:0,13:13:33.08:337,33,0	0/0:8,0:8:21.07:0,21,264
chr10	51109449	.	G	GCT	1683.44	PASS	AC=28;AF=1.000;AN=28;DP=180;FS=0.000;HRun=0;HaplotypeScore=11.3470;InbreedingCoeff=-0.1324;MQ=15.13;MQ0=104;QD=20.28;VQSLOD=2.9047;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,2:3:6.02:121,6,0	1/1:2,4:3:9.03:182,9,0	./.	./.	1/1:2,6:4:9.03:182,9,0	1/1:2,3:2:6.02:121,6,0	./.	./.	./.	1/1:3,3:1:3.01:61,3,0	1/1:1,5:1:3.01:61,3,0	1/1:1,3:3:9.03:182,9,0	1/1:5,2:2:3.01:61,3,0	./.	1/1:0,1:1:3.01:61,3,0	./.	./.	1/1:6,2:3:3.01:61,3,0	./.	./.	./.	1/1:3,1:1:3.01:61,3,0	1/1:0,3:2:3.01:61,3,0	./.	./.	./.	1/1:7,7:7:21.07:420,21,0	1/1:1,3:2:6.02:122,6,0
chr10	51113005	.	GA	G	5287.61	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=15.751;DP=623;FS=4.343;HRun=8;HaplotypeScore=76.7991;InbreedingCoeff=0.9992;MQ=79.54;MQ0=0;MQRankSum=-0.135;QD=24.82;ReadPosRankSum=-0.119;VQSLOD=5.4913;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:48.11:0,48,563	1/1:1,9:10:21.03:203,21,0	0/0:17,0:17:39.10:0,39,448	0/0:22,0:23:39.18:0,39,495	0/0:30,0:30:87.27:0,87,1051	0/0:29,0:29:72.19:0,72,840	0/0:20,0:20:57.17:0,57,685	1/1:5,40:45:99:1099,117,0	0/0:15,0:15:45.14:0,45,544	0/0:22,0:22:60.18:0,60,725	0/0:22,0:22:63.18:0,63,750	0/0:13,0:13:39.10:0,39,451	0/0:20,0:21:60.05:0,60,703	0/0:19,0:19:54.17:0,54,652	1/1:2,24:26:72.11:695,72,0	1/1:2,17:19:48.08:463,48,0	0/0:24,0:24:69.21:0,69,832	0/0:14,0:14:39.04:0,39,429	1/1:3,20:23:60.09:579,60,0	1/1:2,34:36:99:945,99,0	1/1:2,21:23:60.10:579,60,0	0/0:22,1:23:31.34:0,31,652	0/0:25,0:25:66.20:0,66,796	0/0:14,0:14:42.09:0,42,491	0/0:16,0:16:45.12:0,45,530	0/0:31,0:31:78.23:0,78,932	1/1:2,29:31:75.12:724,75,0	0/0:13,0:13:36.08:0,36,412
chr10	51113712	.	GTTTC	G	1403.07	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=2.026;DP=473;FS=1.194;HRun=0;HaplotypeScore=93.0343;InbreedingCoeff=0.8092;MQ=81.89;MQ0=12;MQRankSum=-0.181;QD=23.38;ReadPosRankSum=1.194;VQSLOD=3.5768;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:2,21:23:4.91:0,5,21	0/0:5,0:5:14.03:0,14,142	0/0:38,0:23:1.87:0,2,392	0/0:52,0:25:59.28:0,59,590	0/0:20,0:20:52.98:0,53,690	0/0:15,0:13:35.55:0,36,496	0/0:11,0:11:30.08:0,30,586	0/0:33,0:33:98.55:0,99,947	0/0:9,0:9:21.05:0,21,355	0/0:13,0:12:36.06:0,36,473	0/0:14,0:14:32.31:0,32,557	1/1:13,0:13:11.09:367,11,0	1/1:9,0:9:24:297,24,0	0/0:16,0:16:42.43:0,42,556	0/0:12,0:12:8.97:0,9,74	0/0:15,0:15:41.85:0,42,423	0/0:18,0:18:32.70:0,33,618	1/1:1,3:4:3.01:56,3,0	0/0:11,0:11:32.62:0,33,318	0/0:16,0:16:45.03:0,45,436	0/0:21,0:20:3.01:0,3,60	1/1:3,4:7:8.36:57,8,0	1/1:8,0:8:23.98:226,24,0	1/1:19,0:16:45:571,45,0	0/0:6,0:6:15.03:0,15,239	0/0:23,0:23:54.37:0,54,969	0/0:21,0:19:6.48:0,6,96	0/0:21,0:19:54.47:0,54,624
chr10	51113716	.	C	CTCTT	2156.24	PASS	AB=1.000;AC=18;AF=0.321;AN=56;BaseQRankSum=-0.224;DP=513;FS=3.616;HRun=0;HaplotypeScore=110.9643;InbreedingCoeff=0.6734;MQ=74.76;MQ0=18;MQRankSum=-2.672;QD=11.72;ReadPosRankSum=-3.218;VQSLOD=2.5410;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:26:7.18:0,7,75	1/1:6,0:6:9:124,9,0	0/0:35,0:20:56.83:0,57,514	0/0:50,0:23:49.09:0,49,447	0/0:24,0:24:50.19:0,50,603	0/1:21,0:19:78.40:78,0,114	0/1:12,0:12:53.98:54,0,121	1/1:41,0:41:99:887,100,0	0/0:7,0:7:21:0,21,237	0/0:16,0:15:37.09:0,37,365	0/0:14,0:14:25.41:0,25,263	0/0:15,0:14:33.03:0,33,367	0/0:11,0:11:23.95:0,24,241	0/0:16,0:16:35.48:0,35,401	1/1:13,0:13:2.97:20,3,0	1/1:17,0:17:40.23:374,40,0	0/0:25,0:24:59.88:0,60,616	0/0:4,0:4:3.01:0,3,32	1/1:13,0:12:25.98:247,26,0	1/1:19,0:19:41.94:416,42,0	1/1:17,0:16:5.51:85,6,0	0/0:8,0:8:5.36:0,5,31	0/0:8,0:8:15.01:0,15,176	0/0:21,0:19:53.90:0,54,580	0/0:6,0:6:14.96:0,15,151	0/0:23,0:22:62.46:0,62,780	1/1:6,19:22:0.32:58,0,0	0/0:19,0:16:42.16:0,42,384
chr10	51113718	.	C	CTT	1555.53	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=-0.484;DP=527;FS=0.000;HRun=1;HaplotypeScore=91.5299;InbreedingCoeff=0.6069;MQ=73.63;MQ0=23;MQRankSum=-2.175;QD=10.44;ReadPosRankSum=-1.173;VQSLOD=-0.1532;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:8.67:0,9,69	1/1:6,0:6:9:99,9,0	0/0:35,0:20:56.83:0,57,515	0/0:50,0:23:48.90:0,49,443	0/0:26,0:26:50.30:0,50,506	0/0:20,0:18:15.40:0,15,144	0/0:14,0:12:11.06:0,11,119	0/1:41,0:41:38.24:600,0,38	0/0:8,0:8:21:0,21,212	0/0:16,0:15:37.31:0,37,360	0/0:15,0:14:17.84:0,18,179	0/0:14,0:13:33.03:0,33,359	0/0:12,0:12:26.99:0,27,268	0/0:20,0:20:36.03:0,36,365	1/1:2,10:12:5:26,5,0	1/1:16,0:16:32.87:307,33,0	0/0:25,0:24:68.62:0,69,627	0/0:4,0:4:3.01:0,3,31	0/1:13,0:12:3.99:207,0,4	1/1:20,0:19:41.52:390,42,0	1/1:17,0:16:5.38:58,5,0	0/0:8,0:8:5.36:0,5,31	0/0:10,0:10:15:0,15,147	0/0:22,0:19:54.01:0,54,570	0/0:7,0:7:12:0,12,119	0/0:24,0:23:65.59:0,66,690	0/1:24,0:21:8.85:36,0,9	0/0:19,0:16:43.76:0,44,363
chr10	51114378	.	GGACA	G	9435.13	PASS	AB=0.600;AC=29;AF=0.518;AN=56;BaseQRankSum=14.801;DP=629;FS=1.552;HRun=0;HaplotypeScore=107.9161;InbreedingCoeff=0.8843;MQ=68.57;MQ0=0;MQRankSum=-0.876;QD=28.85;ReadPosRankSum=3.272;VQSLOD=4.8167;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,17:23:39.13:652,39,0	1/1:2,8:10:9.03:151,9,0	0/0:14,0:12:17.97:0,18,321	0/0:24,0:23:21.54:0,22,694	0/0:25,0:25:60.15:0,60,1375	0/0:19,0:19:51.17:0,51,1185	0/0:24,0:24:7.02:0,7,1110	1/1:11,23:34:69.24:1115,69,0	0/0:26,0:26:60.21:0,60,1484	0/0:28,1:29:19.06:0,19,1529	0/0:25,0:25:57.20:0,57,1346	1/1:3,7:10:15.05:251,15,0	1/1:4,8:12:12.04:201,12,0	0/0:25,0:25:66.23:0,66,1530	1/1:8,18:26:36.12:602,36,0	1/1:5,24:29:5.23:804,5,0	0/0:28,0:28:63.19:0,63,1462	0/1:4,8:12:17.34:324,0,17	1/1:9,19:28:55.94:792,56,0	1/1:6,27:33:84.24:1320,84,0	1/1:3,19:22:30.57:493,31,0	1/1:4,13:17:33.11:552,33,0	1/1:1,23:24:39.13:636,39,0	1/1:1,13:14:33.11:552,33,0	0/0:25,0:25:54.19:0,54,1308	0/0:29,0:29:75.26:0,75,1796	1/1:7,26:33:60.20:991,60,0	0/0:9,0:9:27.09:0,27,617
chr10	51115724	.	AT	A	302.59	PASS	AB=0.857;AC=17;AF=0.607;AN=28;BaseQRankSum=-1.892;DP=53;FS=12.632;HRun=1;HaplotypeScore=12.0951;InbreedingCoeff=0.3217;MQ=85.90;MQ0=5;MQRankSum=0.961;QD=15.13;ReadPosRankSum=-2.264;VQSLOD=0.8613;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:2,0:2:2.98:0,3,22	./.	0/0:9,0:3:6.02:0,6,95	0/0:5,1:4:2.92:0,3,17	./.	1/1:2,2:4:5.99:52,6,0	./.	./.	1/1:1,0:1:3:25,3,0	1/1:1,0:1:2.97:20,3,0	./.	./.	./.	./.	1/1:0,2:2:3.01:41,3,0	1/1:0,1:1:3.01:41,3,0	1/1:0,2:2:6.02:82,6,0	./.	0/0:4,0:4:11.98:0,12,107	./.	./.	1/1:2,0:1:3.01:41,3,0	./.	0/1:5,1:4:11.98:80,0,12	./.	1/1:1,0:1:3:27,3,0	./.	0/0:1,0:1:0.89:0,1,2
chr10	51116031	.	G	GT	5489.33	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-14.652;DP=636;FS=8.956;HRun=6;HaplotypeScore=58.1387;InbreedingCoeff=0.9812;MQ=83.24;MQ0=0;MQRankSum=-0.281;QD=33.07;ReadPosRankSum=-0.389;VQSLOD=4.4597;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:57:99:0,168,1695	1/1:1,2:3:6.02:75,6,0	0/0:20,0:20:51.09:0,51,507	0/0:21,0:21:48.03:0,48,467	0/0:14,0:14:33.07:0,33,336	0/0:23,0:23:60.11:0,60,603	0/0:23,0:23:60.12:0,60,605	1/1:5,26:31:78.23:966,78,0	0/0:29,0:29:84.19:0,84,857	0/0:33,0:33:84.19:0,84,856	0/0:21,0:21:54.07:0,54,539	0/0:29,0:29:81.17:0,81,820	0/0:29,0:29:81.18:0,81,826	0/0:21,0:21:60.13:0,60,606	1/1:0,26:26:72.23:906,72,0	1/1:2,25:27:41.62:837,42,0	0/0:30,0:30:87.16:0,87,877	0/0:27,0:27:69.03:0,69,671	1/1:1,17:18:51.16:629,51,0	1/1:2,7:9:24.03:280,24,0	1/1:3,29:32:87.25:1078,87,0	0/0:15,0:15:39.09:0,39,398	0/0:12,0:12:36.08:0,36,367	0/0:24,0:23:69.16:0,69,704	0/0:11,0:11:30.07:0,30,306	0/0:24,0:24:66.13:0,66,666	1/1:1,19:20:57.18:717,57,0	0/0:7,0:7:21.05:0,21,214
chr10	51116343	.	TA	T	3090.56	PASS	AB=0.892;AC=19;AF=0.339;AN=56;BaseQRankSum=6.608;DP=511;FS=2.220;HRun=11;HaplotypeScore=66.7525;InbreedingCoeff=0.7799;MQ=65.22;MQ0=1;MQRankSum=0.075;QD=16.01;ReadPosRankSum=0.801;VQSLOD=4.4388;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:15:14.33:0,14,77	1/1:0,14:14:35.96:296,36,0	0/1:3,1:3:5.17:5,0,26	0/1:4,0:4:0.02:0,0,0	0/0:22,2:24:5.30:0,5,450	0/0:18,1:19:29.48:0,29,507	0/0:15,0:15:45.02:0,45,454	1/1:7,22:29:62.51:503,63,0	0/0:21,2:23:7.83:0,8,484	0/0:23,2:25:15.39:0,15,531	0/0:23,3:28:10.41:0,10,474	0/0:3,0:16:28.84:0,29,163	0/0:5,0:15:29.30:0,29,172	0/0:15,0:15:30.06:0,30,312	1/1:0,15:17:49.02:381,49,0	1/1:3,13:17:40.98:326,41,0	0/0:14,0:14:27.04:0,27,272	0/0:4,0:15:31.45:0,31,175	1/1:5,22:27:59.90:492,60,0	1/1:7,29:36:80.86:665,81,0	1/1:0,8:8:17.98:148,18,0	0/0:6,0:17:43.53:0,44,295	0/0:7,0:24:34.28:0,34,183	0/0:0,0:1:2.84:0,3,14	0/0:29,1:30:44.51:0,45,665	0/0:20,1:21:38.50:0,38,602	1/1:8,22:30:56.89:468,57,0	0/1:6,1:7:6.59:7,0,142
chr10	51116707	.	G	GCAA	13081.33	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=4.434;DP=789;FS=5.536;HRun=0;HaplotypeScore=114.5689;InbreedingCoeff=0.9993;MQ=85.90;MQ0=0;MQRankSum=-8.281;QD=52.33;ReadPosRankSum=-1.261;VQSLOD=6.7803;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,129,2103	1/1:0,14:14:36.12:803,36,0	0/0:35,0:35:90.01:0,90,1347	0/0:21,0:22:60.83:0,61,936	0/0:31,0:31:78.13:0,78,1182	0/0:19,0:19:42.10:0,42,651	0/0:30,0:30:90.29:0,90,1441	1/1:6,37:44:99:2245,111,0	0/0:39,1:40:41.30:0,41,1588	0/0:35,0:35:96.32:0,96,1523	0/0:25,0:25:66.21:0,66,1054	0/0:19,0:19:54.18:0,54,873	0/0:20,0:20:51.15:0,51,775	0/0:20,0:20:57.18:0,57,907	1/1:3,27:30:66.18:1413,66,0	1/1:1,25:27:57.20:1263,57,0	0/0:29,0:29:84.29:0,84,1361	0/0:24,0:24:66.16:0,66,1019	1/1:3,18:22:54.14:962,54,0	1/1:2,33:35:96.33:2134,96,0	1/1:2,48:51:99:2668,121,0	0/0:21,0:21:60.20:0,60,980	0/0:38,0:38:99:0,105,1649	0/0:38,0:38:99:0,99,1506	0/0:18,0:18:48.15:0,48,760	0/0:21,0:21:57.17:0,57,885	1/1:3,23:27:72.25:1591,72,0	0/0:8,0:8:21.07:0,21,343
chr10	51117078	.	C	CA	5959.43	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-14.509;DP=621;FS=10.700;HRun=5;HaplotypeScore=59.0177;InbreedingCoeff=0.9990;MQ=85.43;MQ0=0;MQRankSum=-2.213;QD=32.57;ReadPosRankSum=-0.715;VQSLOD=4.5424;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:81.20:0,81,871	1/1:0,15:15:36.12:474,36,0	0/0:24,0:24:63.15:0,63,666	0/0:16,0:16:42.09:0,42,436	0/0:30,0:30:78.16:0,78,821	0/0:26,0:26:69.17:0,69,741	0/0:16,0:16:42.10:0,42,451	1/1:1,27:28:81.26:1065,81,0	0/0:31,0:31:84.21:0,84,902	0/0:27,0:27:69.17:0,69,736	0/0:22,0:22:66.14:0,66,693	0/0:21,0:21:54.13:0,54,580	0/0:22,0:22:57.14:0,57,612	0/0:12,0:12:30.07:0,30,322	1/1:0,33:33:93.30:1224,93,0	1/1:1,14:15:36.12:474,36,0	0/0:17,0:17:51.13:0,51,548	0/0:11,0:11:27.06:0,27,290	1/1:4,10:14:33.03:396,33,0	1/1:3,24:27:63.12:790,63,0	1/1:4,16:20:48.16:630,48,0	0/0:29,0:29:78.20:0,78,838	0/0:24,0:24:63.14:0,63,668	0/0:20,0:20:42.10:0,42,451	0/0:26,0:26:78.20:0,78,838	0/0:29,0:29:81.19:0,81,864	1/1:1,30:31:69.22:908,69,0	0/0:7,0:7:21.05:0,21,226
chr10	51118005	.	T	TA	1203.97	PASS	AB=0.860;AC=12;AF=0.214;AN=56;BaseQRankSum=10.174;DP=646;FS=6.314;HRun=8;HaplotypeScore=81.1169;InbreedingCoeff=0.5553;MQ=73.70;MQ0=0;MQRankSum=-1.764;QD=6.62;ReadPosRankSum=-5.876;VQSLOD=-0.2911;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:54.01:0,54,486	0/1:10,1:11:42.94:49,0,43	0/0:18,0:16:23.54:0,24,210	0/0:10,0:11:19.74:0,20,163	0/0:32,0:32:81.03:0,81,741	0/0:22,0:22:56.89:0,57,497	0/0:26,0:26:65.96:0,66,588	1/1:10,17:28:48.93:469,49,0	0/0:23,0:23:59.99:0,60,542	0/0:30,0:30:83.41:0,83,750	0/0:20,0:20:56.99:0,57,508	0/0:21,0:20:60.02:0,60,544	0/0:22,0:22:60.02:0,60,544	0/0:30,0:30:81.03:0,81,735	0/1:21,3:24:63.43:63,0,113	0/1:22,1:23:26.08:26,0,102	0/0:19,0:19:42.01:0,42,384	0/0:11,0:11:32.98:0,33,294	1/1:15,4:19:2.75:192,3,0	1/1:6,10:18:19.94:159,20,0	0/1:12,10:23:5.48:39,0,5	0/0:35,0:35:87.04:0,87,796	0/0:32,0:32:74.98:0,75,678	0/0:26,0:26:75.01:0,75,677	0/0:24,0:24:66.03:0,66,601	0/0:35,0:35:81.02:0,81,734	1/1:6,29:36:30.70:374,31,0	0/0:6,0:6:18.01:0,18,164
chr10	51118199	.	CCTCTTTTTCTCT	C	3818.97	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=0.762;DP=554;FS=38.746;HRun=0;HaplotypeScore=196.3935;InbreedingCoeff=0.6710;MQ=78.22;MQ0=9;MQRankSum=-0.732;QD=24.96;ReadPosRankSum=-1.093;VQSLOD=1.1890;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:23:34.20:34,0,605	1/1:8,0:8:18.06:245,18,0	0/0:28,0:22:47.93:0,48,922	0/0:29,0:22:34.31:0,34,617	0/0:30,0:29:80.54:0,81,2125	0/0:15,0:15:30.33:0,30,503	0/0:17,0:16:29.62:0,30,790	1/1:24,0:24:57.19:899,57,0	0/0:23,0:23:64.79:0,65,1381	0/0:37,0:37:94.20:0,94,3092	0/0:20,0:20:54.16:0,54,1441	0/0:12,0:10:12.67:0,13,256	0/0:20,0:19:16.90:0,17,327	0/0:18,0:18:51.17:0,51,1959	1/1:1,13:15:3.01:111,3,0	1/1:11,3:14:36.99:749,37,0	0/0:22,0:22:63.20:0,63,1513	0/0:9,0:8:16.82:0,17,474	0/1:26,0:25:35.89:785,0,36	1/1:16,0:15:6.02:76,6,0	1/1:22,0:22:14.93:794,15,0	0/0:23,0:22:21.20:0,21,279	0/0:25,0:25:27.82:0,28,365	0/0:14,0:13:25.84:0,26,633	0/0:19,0:19:54.18:0,54,1354	0/0:32,0:32:96.32:0,96,2974	0/1:5,0:5:6.91:126,0,7	0/0:7,0:7:12.04:0,12,211
chr10	51118206	.	TTC	T	57	PASS	AB=0.951;AC=8;AF=0.154;AN=52;BaseQRankSum=1.650;DP=621;FS=2.755;HRun=0;HaplotypeScore=124.1828;InbreedingCoeff=0.1904;MQ=65.94;MQ0=50;MQRankSum=-0.180;QD=0.45;ReadPosRankSum=2.493;VQSLOD=2.5245;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:31:15.40:0,15,154	./.	./.	0/0:23,0:16:0:0,0,0	0/0:35,1:33:20.95:0,21,202	0/0:19,0:19:9.50:0,9,116	0/0:23,0:20:15.04:0,15,190	0/0:23,0:22:2.97:0,3,20	0/1:24,0:24:5.54:6,0,62	0/0:35,0:34:15.88:0,16,311	0/0:18,0:17:10.26:0,10,116	0/0:16,0:11:8.84:0,9,76	0/0:21,0:18:8.45:0,8,65	0/1:20,3:22:78.29:78,0,112	1/1:16,0:14:2.84:14,3,0	1/1:15,0:12:8.52:42,9,0	0/1:25,1:23:18.72:19,0,118	0/0:11,0:8:14.42:0,14,97	0/0:27,0:26:5.96:0,6,42	0/0:21,0:18:2.99:0,3,24	0/0:26,0:25:7:0,7,34	0/0:22,0:21:1.82:0,2,5	0/0:26,0:26:7.34:0,7,39	0/0:17,0:15:20.42:0,20,125	0/1:21,1:20:20.30:20,0,81	0/0:33,0:33:12.03:0,12,157	0/0:15,0:14:8.67:0,9,53	0/0:19,0:8:5.99:0,6,49
chr10	51118295	.	A	AC	877.50	PASS	AB=0.806;AC=14;AF=0.250;AN=56;BaseQRankSum=4.876;DP=506;FS=19.649;HRun=7;HaplotypeScore=85.8381;InbreedingCoeff=0.7830;MQ=66.94;MQ0=18;MQRankSum=-2.676;QD=9.44;ReadPosRankSum=-4.773;VQSLOD=-0.4741;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:42.06:0,42,405	1/1:5,0:5:9.02:96,9,0	0/0:31,0:19:38.90:0,39,350	0/0:35,0:26:16.64:0,17,422	0/0:13,0:13:36.01:0,36,338	0/0:18,0:18:45.04:0,45,434	0/0:19,0:15:27.01:0,27,252	1/1:12,1:10:8.98:86,9,0	0/0:18,0:18:51.08:0,51,489	0/0:32,0:32:96.13:0,96,920	0/0:20,0:20:54.07:0,54,516	0/0:22,0:19:48.07:0,48,462	0/0:21,0:19:45.07:0,45,434	0/0:18,0:18:51.05:0,51,481	0/1:9,3:11:13.48:96,0,13	0/1:10,3:12:2.07:184,0,2	0/0:22,0:22:63.10:0,63,607	0/0:7,0:6:18.03:0,18,174	1/1:12,1:11:27.02:258,27,0	1/1:12,1:11:15:147,15,0	1/1:10,7:11:15.03:152,15,0	0/0:20,0:19:51.08:0,51,491	0/0:24,0:24:44.96:0,45,421	0/0:14,0:13:33.05:0,33,318	0/0:14,0:14:35.55:0,36,328	0/0:27,0:27:75.12:0,75,724	1/1:2,5:5:3.01:36,3,0	0/0:5,0:5:15.02:0,15,144
chr10	51118303	.	ATG	A	38.78	PASS	AB=0.890;AC=6;AF=0.107;AN=56;BaseQRankSum=3.932;DP=547;FS=0.908;HRun=0;HaplotypeScore=101.7661;InbreedingCoeff=0.3183;MQ=63.46;MQ0=22;MQRankSum=-3.443;QD=0.71;ReadPosRankSum=-0.209;VQSLOD=1.8999;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,1:33:42.14:0,42,671	1/1:4,0:4:3.11:8,3,0	0/0:37,0:17:19.33:0,19,227	0/0:39,0:24:25.72:0,26,260	0/0:19,0:19:54.18:0,54,868	0/0:23,0:23:40.72:0,41,670	0/0:22,0:17:33.11:0,33,530	0/0:9,0:5:1.55:0,2,4	0/1:19,3:22:85.20:85,0,712	0/0:35,1:35:59.86:0,60,1408	0/0:20,0:20:50.67:0,51,820	0/0:21,0:18:42.13:0,42,653	0/0:22,0:19:36.12:0,36,580	0/0:19,0:19:23.65:0,24,722	0/0:10,0:9:3.01:0,3,48	0/0:11,0:10:0.69:0,1,46	0/0:23,0:23:60.18:0,60,940	0/0:10,0:9:18.04:0,18,290	1/1:11,0:9:1.14:17,1,0	0/0:10,0:8:2.99:0,3,24	0/0:21,0:15:1.37:0,1,3	0/0:24,0:23:41.90:0,42,669	0/0:22,2:24:8.79:0,9,618	0/0:15,0:15:30.10:0,30,481	0/1:16,2:18:33.14:33,0,493	0/0:31,2:32:21.09:0,21,1098	0/0:4,0:2:0:0,0,0	0/0:5,0:5:9.03:0,9,141
chr10	51118321	.	GTC	G	120.15	PASS	AB=0.910;AC=8;AF=0.143;AN=56;BaseQRankSum=6.582;DP=617;FS=2.229;HRun=0;HaplotypeScore=129.6090;InbreedingCoeff=0.3906;MQ=56.95;MQ0=17;MQRankSum=-4.153;QD=1.11;ReadPosRankSum=-2.272;VQSLOD=2.2268;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:37:32.53:0,33,726	0/1:7,1:8:34.89:38,0,35	0/1:52,0:16:8.36:8,0,254	0/0:46,0:19:39.36:0,39,361	0/0:23,0:23:69.11:0,69,1120	0/0:23,0:23:17.63:0,18,754	0/0:31,0:24:44.56:0,45,676	1/1:10,2:6:11.97:61,12,0	0/0:26,0:26:2.98:0,3,939	0/0:41,0:40:99:0,109,1801	0/0:20,0:19:32.24:0,32,978	0/0:19,0:15:39.13:0,39,746	0/0:21,0:17:35.69:0,36,674	0/0:27,0:27:33.60:0,34,1046	0/0:6,1:7:11.76:0,12,113	0/1:10,1:10:10.85:11,0,66	0/0:30,0:30:64.89:0,65,1232	0/0:12,0:11:23.98:0,24,386	0/1:12,3:9:2.88:98,0,3	1/1:10,0:10:4.88:36,5,0	0/0:20,0:17:3.56:0,4,10	0/0:27,0:24:47.79:0,48,786	0/0:26,0:25:23.66:0,24,730	0/0:15,0:13:30.10:0,30,569	0/0:18,0:18:18.29:0,18,642	0/0:30,0:29:71.27:0,71,1341	0/0:4,0:3:0.47:0,0,1	0/0:4,0:4:12.01:0,12,183
chr10	51118327	.	GTGTT	G	220.12	PASS	AB=1.000;AC=10;AF=0.179;AN=56;BaseQRankSum=6.838;DP=621;FS=11.163;HRun=0;HaplotypeScore=150.7578;InbreedingCoeff=0.3720;MQ=56.40;MQ0=15;MQRankSum=-6.177;QD=2.59;ReadPosRankSum=-1.568;VQSLOD=1.9778;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:35:20.05:0,20,968	1/1:6,0:6:5.09:28,5,0	0/0:49,0:16:23.92:0,24,629	0/0:46,0:18:33.58:0,34,723	0/0:22,0:22:66.23:0,66,1711	0/1:24,0:24:7.39:7,0,943	0/0:35,0:28:28.77:0,29,873	1/1:13,3:10:14.09:191,14,0	0/0:28,0:28:73.68:0,74,1781	0/0:37,0:36:99:0,102,2608	0/0:19,0:18:54.19:0,54,1333	0/0:21,0:17:40.49:0,40,1053	0/0:23,0:19:36.02:0,36,779	0/0:27,0:27:74.90:0,75,1980	0/1:6,0:6:25.28:25,0,71	0/1:12,0:11:28.92:29,0,73	0/0:32,0:32:83.69:0,84,2143	0/0:13,1:13:33.04:0,33,642	0/1:13,0:7:25.64:34,0,26	1/1:8,0:7:2.10:48,2,0	0/0:14,4:17:3.63:0,4,9	0/0:29,0:26:59.65:0,60,1073	0/0:27,0:26:44.64:0,45,1114	0/0:16,0:14:30.05:0,30,742	0/0:17,0:17:48.05:0,48,1142	0/0:29,0:28:81.25:0,81,2001	0/0:4,0:3:3.45:0,3,23	0/0:4,0:4:12.04:0,12,268
chr10	51118335	.	GTCTT	G	1868.04	PASS	AB=0.926;AC=19;AF=0.339;AN=56;BaseQRankSum=10.769;DP=631;FS=32.498;HRun=0;HaplotypeScore=149.1810;InbreedingCoeff=0.1408;MQ=55.82;MQ0=15;MQRankSum=-10.111;QD=7.08;ReadPosRankSum=-5.391;VQSLOD=-0.6515;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:38,1:37:88.21:88,0,567	1/1:6,0:6:14.38:193,14,0	0/0:50,0:17:40.86:0,41,797	0/0:49,0:20:28.67:0,29,771	0/0:25,0:25:75.26:0,75,1916	0/1:19,2:21:99:142,0,484	0/1:32,2:28:99:391,0,329	1/1:14,1:11:8.64:130,9,0	0/0:27,1:28:63.09:0,63,1854	0/0:35,0:35:99:0,105,2627	0/0:18,0:17:48.16:0,48,1308	0/1:19,2:17:63.88:64,0,635	0/1:20,1:18:25.16:25,0,420	0/0:27,0:27:77.29:0,77,2045	0/1:6,1:7:36.50:134,0,37	0/1:9,5:13:50.64:451,0,51	0/0:33,1:34:47.50:0,47,2343	0/1:15,0:14:32.84:33,0,364	0/1:12,0:6:2.58:78,0,3	1/1:5,1:5:9.03:141,9,0	0/1:17,2:18:2.81:47,0,3	0/0:27,1:25:53.72:0,54,731	0/1:28,1:28:44.67:45,0,640	0/0:16,0:14:27.08:0,27,452	0/0:19,0:19:51.16:0,51,1241	0/0:33,0:30:90.31:0,90,2253	1/1:3,1:3:6.02:83,6,0	0/0:3,0:3:9.03:0,9,231
chr10	51118339	.	T	TTGTG	7733.68	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=5.385;DP=664;FS=14.245;HRun=0;HaplotypeScore=142.9159;InbreedingCoeff=0.8961;MQ=53.85;MQ0=21;MQRankSum=-5.937;QD=23.58;ReadPosRankSum=-1.629;VQSLOD=3.1959;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:14,28:41:34:781,34,0	1/1:7,0:7:20.74:297,21,0	0/0:51,0:15:20.25:0,20,402	0/0:55,0:19:4.90:0,5,447	0/0:24,0:24:60.20:0,60,1024	1/1:16,6:21:36.47:565,36,0	1/1:13,19:26:47.17:1092,47,0	1/1:19,0:16:14.82:157,15,0	0/0:28,0:28:48.78:0,49,868	0/0:38,0:37:75.26:0,75,1300	0/0:19,0:18:48.11:0,48,727	1/1:15,5:17:38.77:705,39,0	1/1:17,5:18:24.05:412,24,0	0/0:28,0:28:77.92:0,78,1258	1/1:7,1:8:21.05:321,21,0	1/1:16,0:15:22.27:528,22,0	0/0:36,0:36:63.25:0,63,1307	1/1:11,5:15:1.31:480,1,0	1/1:12,0:6:12.89:114,13,0	1/1:6,0:5:9.02:133,9,0	1/1:21,0:19:6.81:110,7,0	1/1:7,23:27:21.04:447,21,0	1/1:6,24:30:36.02:897,36,0	1/1:7,9:14:21.06:530,21,0	0/0:21,0:21:51.15:0,51,795	0/0:33,0:30:72.19:0,72,1158	1/1:4,1:4:9.03:167,9,0	0/0:3,0:3:6.02:0,6,106
chr10	51118373	.	T	TGTG	135.38	PASS	AB=0.876;AC=4;AF=0.071;AN=56;BaseQRankSum=6.186;DP=689;FS=22.841;HRun=0;HaplotypeScore=182.6048;InbreedingCoeff=0.1791;MQ=43.86;MQ0=54;MQRankSum=-7.174;QD=1.65;ReadPosRankSum=-4.310;VQSLOD=-0.3701;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:28:41.70:0,42,334	0/0:14,0:14:16.57:0,17,245	1/1:26,0:3:0.89:2,1,0	0/0:44,0:8:10.58:0,11,127	0/0:26,0:24:69.23:0,69,1113	0/1:19,1:17:30.04:30,0,303	0/1:27,9:27:99:194,0,180	0/0:64,0:53:95.74:0,96,1316	0/0:18,0:19:26.04:0,26,594	0/0:29,0:25:52.89:0,53,831	0/0:12,0:12:36.09:0,36,536	0/0:10,0:7:10.86:0,11,53	0/0:9,0:6:11.22:0,11,86	0/0:29,0:28:78.22:0,78,1205	0/0:25,0:22:46.44:0,46,522	0/0:24,0:23:55.46:0,55,533	0/0:29,0:28:64.16:0,64,1072	0/0:13,0:13:22.20:0,22,292	0/0:23,0:13:26.44:0,26,320	0/0:20,0:18:19.87:0,20,227	0/0:46,0:31:31.05:0,31,212	0/0:24,0:22:23.56:0,24,244	0/0:18,0:16:15.87:0,16,159	0/0:23,0:20:11.91:0,12,131	0/0:23,0:22:50.26:0,50,811	0/0:34,0:30:84.29:0,84,1374	0/0:13,0:12:30.06:0,30,344	0/0:4,0:4:12.04:0,12,200
chr10	51118374	.	G	GTC	276.08	PASS	AB=0.980;AC=8;AF=0.143;AN=56;BaseQRankSum=6.304;DP=698;FS=21.197;HRun=0;HaplotypeScore=174.4663;InbreedingCoeff=0.1115;MQ=42.71;MQ0=55;MQRankSum=-6.737;QD=1.30;ReadPosRankSum=2.391;VQSLOD=0.9611;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:28:44.37:0,44,369	0/1:15,0:15:6.38:6,0,22	0/0:28,0:3:0:0,0,0	0/0:42,0:7:5.18:0,5,93	0/0:26,0:24:69.18:0,69,984	0/0:21,0:18:34.44:0,34,231	0/0:36,0:27:40.64:0,41,323	0/1:61,6:54:99:213,0,646	0/0:19,0:19:40.64:0,41,544	0/0:30,0:26:61.05:0,61,732	0/0:14,0:14:35.92:0,36,469	0/0:10,0:7:14.77:0,15,107	0/0:9,0:6:11.76:0,12,77	0/0:29,0:28:78.10:0,78,1068	0/1:24,1:22:19.66:20,0,39	0/1:25,0:24:7.23:118,0,7	0/0:29,0:28:41.41:0,41,915	0/0:13,0:13:23.98:0,24,300	0/0:24,0:13:8.71:0,9,140	1/1:19,1:18:1.35:2,1,0	0/1:46,0:31:5.93:12,0,6	0/0:23,0:21:29.91:0,30,287	0/0:18,0:16:20.57:0,21,182	0/0:23,0:20:12.49:0,12,131	0/0:23,0:22:56.68:0,57,763	0/0:34,0:30:84.27:0,84,1245	0/1:14,0:13:22.30:24,0,22	0/0:4,0:4:12.04:0,12,183
chr10	51118384	.	C	CTG	5648.45	PASS	AB=0.825;AC=30;AF=0.556;AN=54;BaseQRankSum=9.637;DP=701;FS=36.827;HRun=0;HaplotypeScore=164.0482;InbreedingCoeff=0.6494;MQ=42.22;MQ0=46;MQRankSum=-4.771;QD=13.04;ReadPosRankSum=-2.483;VQSLOD=2.3051;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:29:27.04:178,27,0	1/1:6,7:14:18.06:283,18,0	./.	0/0:37,0:3:5.98:0,6,49	0/0:25,0:24:57.14:0,57,682	1/1:15,7:20:40.13:621,40,0	0/1:32,6:30:22.86:361,0,23	0/1:58,7:54:24.20:585,0,24	0/0:22,0:22:40.58:0,41,481	0/0:28,0:25:56.69:0,57,689	0/0:12,0:12:26.95:0,27,310	1/1:3,0:8:15:132,15,0	1/1:5,0:6:6.62:34,7,0	0/0:30,0:30:63.17:0,63,760	1/1:15,12:24:39.09:637,39,0	1/1:10,18:26:56.22:875,56,0	0/0:31,0:30:56.34:0,56,762	0/1:8,0:18:41.13:64,0,41	0/1:16,2:11:31.62:91,0,32	1/1:8,15:22:27.06:385,27,0	1/1:30,18:35:54.99:654,55,0	1/1:18,0:20:16.47:112,16,0	1/1:11,0:14:13.55:108,14,0	1/1:7,2:26:8.11:77,8,0	0/0:25,0:24:56.64:0,57,643	0/0:33,0:31:68.24:0,68,816	1/1:8,7:14:29.36:450,29,0	0/0:5,0:5:12.04:0,12,147
chr10	51118464	.	TTG	T	2102.02	PASS	AB=0.898;AC=20;AF=0.400;AN=50;BaseQRankSum=7.776;DP=659;FS=13.148;HRun=0;HaplotypeScore=133.2359;InbreedingCoeff=0.2002;MQ=47.49;MQ0=31;MQRankSum=-1.186;QD=6.06;ReadPosRankSum=0.265;VQSLOD=2.2825;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:37,9:40:8.36:380,0,8	0/0:9,0:9:0.73:0,1,18	./.	./.	0/0:24,0:24:39.72:0,40,630	0/1:30,0:29:11.71:12,0,127	0/0:33,1:31:21.64:0,22,219	0/0:20,0:7:2.92:0,3,17	0/1:32,6:38:15.16:15,0,613	0/1:35,0:34:11.95:12,0,664	0/0:13,2:14:23.76:0,24,325	1/1:11,9:19:36.10:414,36,0	1/1:14,9:23:43.76:372,44,0	0/0:39,5:44:50.18:0,50,1069	0/0:12,0:12:0.89:0,1,2	0/0:13,0:12:3.01:0,3,30	0/0:31,0:30:46.66:0,47,672	0/1:13,5:17:15.49:279,0,15	1/1:15,0:15:5.88:36,6,0	./.	0/1:16,0:12:9.54:10,0,11	1/1:12,3:15:26.99:270,27,0	0/1:11,3:14:22.03:78,0,22	1/1:21,9:27:27.07:304,27,0	0/0:21,1:20:4.59:0,5,283	0/1:25,4:27:61.74:62,0,367	1/1:8,0:8:5.42:23,5,0	0/0:13,0:12:6.43:0,6,364
chr10	51118494	.	CTG	C	5464.48	PASS	AB=0.837;AC=31;AF=0.554;AN=56;BaseQRankSum=9.208;DP=679;FS=16.617;HRun=0;HaplotypeScore=145.4359;InbreedingCoeff=0.6470;MQ=49.56;MQ0=21;MQRankSum=-0.838;QD=14.27;ReadPosRankSum=1.014;VQSLOD=3.9725;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:44,8:45:58.10:666,58,0	1/1:1,5:6:14.87:148,15,0	0/0:5,0:4:8.89:0,9,90	0/0:17,1:10:9.79:0,10,214	0/0:29,0:29:26.42:0,26,836	1/1:11,23:33:16.62:251,17,0	1/1:27,8:34:65.53:734,66,0	0/1:15,1:7:11.17:29,0,11	0/0:40,2:42:37.80:0,38,970	0/0:44,0:42:98.85:0,99,1466	0/0:23,0:21:34.76:0,35,650	1/1:11,11:22:51.15:613,51,0	1/1:10,25:33:32.22:312,32,0	0/0:48,1:48:34.39:0,34,1398	1/1:2,9:11:18.05:198,18,0	0/1:1,15:16:15.83:292,0,16	0/0:30,1:30:18.26:0,18,668	0/1:10,6:15:30.33:293,0,30	0/1:19,0:13:15.47:95,0,15	1/1:3,10:12:18.05:200,18,0	1/1:9,10:14:14.77:134,15,0	1/1:20,4:24:45.05:499,45,0	1/1:15,2:17:27.53:307,28,0	1/1:17,9:24:39.09:448,39,0	0/0:19,0:17:30.02:0,30,395	0/0:36,0:35:57.22:0,57,1281	1/1:0,8:8:21.06:244,21,0	0/1:11,0:10:2.89:3,0,170
chr10	51122590	.	G	GA	776.57	PASS	AC=8;AF=0.211;AN=38;BaseQRankSum=7.498;DP=453;FS=33.902;HRun=1;HaplotypeScore=38.4473;InbreedingCoeff=0.6899;MQ=14.31;MQ0=241;MQRankSum=-0.552;QD=9.83;ReadPosRankSum=1.163;VQSLOD=-0.6306;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:4:6.02:0,6,84	./.	./.	./.	0/0:20,0:4:9.03:0,9,111	0/0:13,0:4:9.03:0,9,126	0/0:12,0:4:12.04:0,12,167	./.	0/0:37,0:14:33.11:0,33,460	0/0:17,0:2:3.01:0,3,42	0/0:15,0:4:9.03:0,9,126	0/0:23,0:12:27.09:0,27,377	0/0:24,0:11:27.09:0,27,376	0/0:18,0:7:18.06:0,18,251	1/1:9,15:12:36.02:334,36,0	1/1:9,14:11:30.03:284,30,0	0/0:17,0:4:6.02:0,6,78	0/0:19,0:1:3.01:0,3,42	1/1:19,4:4:12.04:144,12,0	./.	./.	0/0:9,0:2:6.02:0,6,80	./.	./.	0/0:15,0:2:6.02:0,6,84	./.	1/1:3,6:5:15.03:150,15,0	0/0:13,0:1:3.01:0,3,42
chr10	51122592	.	TTC	T	697.69	PASS	AC=8;AF=0.211;AN=38;BaseQRankSum=7.735;DP=460;FS=38.887;HRun=0;HaplotypeScore=41.3244;InbreedingCoeff=0.7069;MQ=14.42;MQ0=244;MQRankSum=-1.012;QD=8.83;ReadPosRankSum=1.790;VQSLOD=1.6101;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:4:6.02:0,6,122	./.	./.	./.	0/0:20,0:4:8.94:0,9,101	0/0:14,0:4:9.03:0,9,182	0/0:12,0:4:12.04:0,12,243	./.	0/0:37,0:14:33.11:0,33,669	0/0:16,0:2:6.02:0,6,116	0/0:17,0:4:12.04:0,12,218	0/0:25,0:13:33.11:0,33,659	0/0:25,0:11:30.10:0,30,555	0/0:18,0:7:18.06:0,18,365	1/1:9,15:12:35.97:312,36,0	1/1:8,14:11:30:266,30,0	0/0:18,0:5:3.01:0,3,61	0/0:20,0:2:6.02:0,6,103	1/1:19,4:4:11.95:117,12,0	./.	./.	0/0:9,0:2:5.05:0,5,67	./.	./.	0/0:15,0:2:6.02:0,6,122	./.	1/1:4,6:5:15.02:141,15,0	0/0:13,0:1:3.01:0,3,61
chr10	51122806	.	AG	A	79.58	PASS	AC=4;AF=0.083;AN=48;BaseQRankSum=-0.746;DP=199;FS=7.943;HRun=6;HaplotypeScore=20.7346;InbreedingCoeff=0.5191;MQ=43.90;MQ0=37;MQRankSum=-0.847;QD=7.96;ReadPosRankSum=0.862;VQSLOD=-0.5995;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:12:27.05:0,27,349	./.	0/0:6,0:2:2.50:0,2,9	./.	0/0:11,0:8:15:0,15,176	1/1:0,4:4:9.03:108,9,0	1/1:0,6:5:6.02:72,6,0	0/0:14,0:10:24.08:0,24,318	0/0:16,0:13:27.09:0,27,373	0/0:10,0:5:15.05:0,15,209	0/0:8,0:7:18.02:0,18,230	0/0:9,0:7:20.52:0,21,240	0/0:4,0:4:3.48:0,3,42	0/0:4,0:3:9.03:0,9,126	0/0:5,0:3:6.02:0,6,82	0/0:6,0:4:6.02:0,6,82	0/0:12,0:11:30.10:0,30,420	0/0:2,0:2:6.02:0,6,84	0/0:1,0:1:3.01:0,3,41	./.	./.	0/0:7,0:6:15.05:0,15,210	0/0:10,0:5:9.03:0,9,126	0/0:5,0:5:12.04:0,12,166	0/0:10,0:6:15.02:0,15,175	0/0:11,0:6:18.06:0,18,251	0/0:4,0:3:6.02:0,6,81	0/0:10,0:8:24.01:0,24,272
chr10	51122894	.	T	TAA	1739.65	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=1.393;DP=319;FS=20.688;HRun=10;HaplotypeScore=43.9448;InbreedingCoeff=0.8433;MQ=74.47;MQ0=6;MQRankSum=0.353;QD=23.83;ReadPosRankSum=-1.718;VQSLOD=0.8131;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:45.03:0,45,448	1/1:0,0:2:3.01:33,3,0	0/0:19,0:13:3.63:0,4,180	0/0:18,0:12:8.97:0,9,119	0/0:15,0:15:39.03:0,39,397	0/0:14,0:15:23.75:0,24,296	0/0:6,0:7:17.76:0,18,157	1/1:5,17:25:56.14:741,56,0	0/0:9,0:9:18.03:0,18,183	0/0:11,0:11:30.07:0,30,305	0/0:16,0:17:26.74:0,27,327	0/0:2,0:2:6.01:0,6,61	0/0:11,0:11:24.03:0,24,244	0/0:9,0:9:24.05:0,24,244	1/1:1,0:6:17.94:178,18,0	1/1:0,0:8:15.04:163,15,0	0/0:23,0:23:60.10:0,60,610	0/0:15,0:15:42.08:0,42,427	1/1:1,7:8:21.05:277,21,0	1/1:0,3:3:9.03:134,9,0	1/1:1,4:5:9.92:137,10,0	0/0:1,0:1:3.01:0,3,31	0/0:4,0:4:9:0,9,91	0/0:4,0:4:9.01:0,9,92	0/0:12,0:12:30.04:0,30,305	0/0:9,0:10:23.78:0,24,225	1/1:2,10:12:18.06:268,18,0	0/0:23,0:23:60.07:0,60,601
chr10	51123282	.	C	CAT	1022.59	PASS	AB=1.000;AC=15;AF=0.375;AN=40;BaseQRankSum=3.728;DP=288;FS=19.164;HRun=0;HaplotypeScore=55.9413;InbreedingCoeff=0.7625;MQ=70.36;MQ0=4;MQRankSum=-4.144;QD=16.23;ReadPosRankSum=-2.776;VQSLOD=0.8409;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:10,0:10:0:0,0,0	0/0:1,3:4:0:0,0,0	0/0:18,0:8:8.45:0,8,78	0/0:33,0:15:10.76:0,11,58	0/0:36,0:35:99:0,102,1355	1/1:3,0:3:2.99:23,3,0	./.	1/1:10,13:22:42.06:610,42,0	0/0:9,0:9:21.07:0,21,287	0/0:15,0:15:36.12:0,36,485	0/0:20,0:20:48.15:0,48,638	./.	./.	0/0:4,0:4:12.04:0,12,162	1/1:6,0:6:6.02:101,6,0	./.	0/0:19,0:19:48.12:0,48,621	1/1:8,0:8:15.08:170,15,0	1/1:2,3:5:12.51:177,13,0	./.	1/1:1,1:2:3.01:53,3,0	./.	./.	./.	0/0:19,0:19:51.15:0,51,673	0/0:24,0:24:66.22:0,66,893	1/1:0,4:5:3.01:37,3,0	0/0:12,0:12:36.10:0,36,471
chr10	51123350	.	AT	A	1306.56	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=7.210;DP=349;FS=15.947;HRun=7;HaplotypeScore=43.2310;InbreedingCoeff=0.9061;MQ=63.94;MQ0=0;MQRankSum=-1.647;QD=22.53;ReadPosRankSum=0.719;VQSLOD=1.9304;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,9:10:24.05:244,24,0	0/0:5,0:5:9:0,9,97	0/0:4,0:4:6.87:0,7,56	0/0:2,0:2:1.09:0,1,26	0/0:27,0:27:66.21:0,66,830	0/0:7,0:7:21.07:0,21,264	0/0:9,0:9:27.09:0,27,339	0/0:29,0:29:81.21:0,81,989	0/0:10,0:10:30.09:0,30,368	0/0:22,0:22:60.16:0,60,738	0/0:22,0:22:54.17:0,54,679	1/1:0,4:4:9.02:92,9,0	1/1:0,9:9:27.06:274,27,0	0/0:12,0:12:36.12:0,36,453	0/0:8,0:8:24.08:0,24,298	0/0:9,0:9:21.05:0,21,251	0/0:17,0:17:48.15:0,48,602	1/1:3,17:20:45.10:459,45,0	0/0:15,0:15:39.10:0,39,466	0/0:13,0:13:33.10:0,33,406	0/0:6,0:6:18.02:0,18,198	1/1:0,6:6:15.03:153,15,0	1/1:0,5:5:15.03:153,15,0	1/1:0,4:4:12.03:122,12,0	0/0:21,0:21:60.19:0,60,755	0/0:24,0:24:68.57:0,69,827	0/0:11,0:11:18.06:0,18,226	0/0:18,0:18:48.15:0,48,604
chr10	51123530	.	A	AT	5205.13	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=1.601;DP=517;FS=0.000;HRun=5;HaplotypeScore=59.8110;InbreedingCoeff=0.9948;MQ=70.51;MQ0=0;MQRankSum=-1.481;QD=32.74;ReadPosRankSum=-1.973;VQSLOD=4.5289;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:47.52:0,48,543	1/1:1,5:6:15.05:197,15,0	0/0:7,0:7:21.05:0,21,224	0/0:18,0:18:48.05:0,48,487	0/0:26,0:26:72.16:0,72,765	0/0:17,0:17:42.08:0,42,442	0/0:21,0:21:57.14:0,57,613	1/1:5,21:26:63.17:796,63,0	0/0:29,0:29:81.20:0,81,869	0/0:19,0:19:45.11:0,45,484	0/0:14,0:14:36.09:0,36,386	0/0:20,0:20:57.14:0,57,613	0/0:18,0:18:48.09:0,48,504	0/0:18,0:18:48.10:0,48,508	1/1:5,18:23:54.18:710,54,0	1/1:3,21:24:30.95:757,31,0	0/0:17,0:17:38.69:0,39,504	0/0:14,0:14:33.08:0,33,354	1/1:0,22:22:66.16:832,66,0	1/1:0,11:11:30.10:395,30,0	1/1:1,16:17:45.15:592,45,0	0/0:16,0:16:48.12:0,48,516	0/0:10,0:10:27.05:0,27,282	0/0:12,0:12:33.08:0,33,355	0/0:19,0:19:54.10:0,54,562	0/0:35,0:35:93.23:0,93,999	1/1:2,28:30:72.19:925,72,0	0/0:10,0:10:18.04:0,18,193
chr10	51123655	.	GTC	G	313.86	PASS	AB=0.950;AC=5;AF=0.089;AN=56;BaseQRankSum=1.557;DP=600;FS=2.030;HRun=0;HaplotypeScore=126.2662;InbreedingCoeff=0.2647;MQ=69.26;MQ0=7;MQRankSum=-1.954;QD=3.78;ReadPosRankSum=0.452;VQSLOD=2.8615;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:33:37.87:0,38,275	0/0:10,0:10:17.71:0,18,153	0/0:37,0:20:49.46:0,49,536	0/0:41,0:27:62.80:0,63,674	0/0:26,0:26:41.34:0,41,826	0/1:14,3:17:27.45:96,0,27	1/1:28,2:29:10.54:303,11,0	0/0:29,0:27:62.97:0,63,575	0/0:20,0:20:48.98:0,49,668	0/0:23,0:23:53.43:0,53,803	0/0:14,0:14:29.19:0,29,566	0/0:16,0:16:14.86:0,15,60	0/0:17,0:17:3.95:0,4,127	0/0:20,0:20:25.53:0,26,719	0/1:25,0:25:21.05:21,0,304	0/0:29,0:29:49.20:0,49,485	0/0:23,0:23:31.31:0,31,561	0/0:17,0:17:14.41:0,14,123	0/0:18,0:18:38.92:0,39,331	0/0:6,0:5:3.01:0,3,48	0/0:30,0:28:20.95:0,21,186	0/0:15,0:15:20.35:0,20,139	0/0:7,0:7:11.98:0,12,98	0/0:27,0:27:29.54:0,30,249	0/0:18,0:18:16.14:0,16,362	0/0:20,0:20:55.24:0,55,718	0/0:21,0:21:46.72:0,47,441	0/1:11,0:11:4.72:5,0,121
chr10	51123661	.	CTG	C	1256.04	PASS	AB=0.936;AC=18;AF=0.321;AN=56;BaseQRankSum=6.869;DP=630;FS=0.000;HRun=0;HaplotypeScore=126.9294;InbreedingCoeff=0.2306;MQ=64.23;MQ0=12;MQRankSum=1.309;QD=4.65;ReadPosRankSum=1.737;VQSLOD=2.6720;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:36,0:36:4.04:176,0,4	0/0:2,0:13:11.24:0,11,71	0/0:37,0:19:6.02:0,6,84	0/0:39,0:23:11.97:0,12,107	0/1:23,4:27:12.12:12,0,624	0/0:17,0:17:12.02:0,12,135	0/1:27,0:26:17.99:18,0,76	0/0:29,0:27:18.24:0,18,119	0/0:19,0:20:12.92:0,13,578	0/0:25,0:24:7.57:0,8,495	0/0:13,3:16:4.62:0,5,496	1/1:17,0:17:35.49:255,35,0	1/1:16,0:16:17.08:113,17,0	0/1:17,2:19:55.33:55,0,532	0/0:24,0:27:0.82:0,1,38	0/0:27,0:32:7.63:0,8,240	0/1:24,3:27:99:128,0,281	1/1:18,0:18:31.93:217,32,0	0/0:20,0:18:12.41:0,12,67	0/0:10,0:9:3:0,3,28	0/0:31,0:29:5.44:0,5,39	0/1:16,0:16:0.37:114,0,0	1/1:9,0:8:2.97:20,3,0	0/1:30,0:30:34.45:173,0,34	0/1:13,4:17:42.40:42,0,273	0/0:22,0:22:11.01:0,11,384	0/0:22,0:22:4.78:0,5,120	1/1:8,3:11:9.03:103,9,0
chr10	51123687	.	GTGTC	G	2121.84	PASS	AB=0.996;AC=24;AF=0.429;AN=56;BaseQRankSum=5.807;DP=643;FS=6.712;HRun=0;HaplotypeScore=142.5030;InbreedingCoeff=0.3623;MQ=48.08;MQ0=27;MQRankSum=1.024;QD=5.98;ReadPosRankSum=-0.717;VQSLOD=2.2336;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:41,1:42:32.59:283,33,0	0/0:12,0:12:10.70:0,11,108	0/0:32,0:5:11.97:0,12,98	0/0:57,0:12:13.50:0,13,213	0/0:25,0:25:57.10:0,57,1116	0/1:15,0:15:9.67:23,0,10	0/1:24,0:23:22.92:41,0,23	0/1:20,0:19:52.98:179,0,53	0/0:28,0:28:11.01:0,11,1197	0/0:23,0:22:62.20:0,62,969	0/0:19,0:19:43.83:0,44,936	1/1:25,1:26:35.24:260,35,0	1/1:6,10:16:18.30:162,18,0	0/0:22,0:22:50.62:0,51,991	0/1:21,0:21:45.58:46,0,66	0/1:28,0:28:93.28:93,0,205	0/0:25,0:25:19.62:0,20,723	1/1:12,3:15:32.16:299,32,0	0/1:17,0:15:10.26:138,0,10	1/1:18,0:17:5.97:49,6,0	1/1:28,0:26:14.40:118,14,0	1/1:19,1:19:13.87:173,14,0	1/1:6,0:5:3.01:44,3,0	0/1:30,1:31:22.87:263,0,23	0/0:15,0:15:19.13:0,19,638	0/0:24,0:24:18.99:0,19,902	0/1:28,0:28:42.42:148,0,42	0/0:6,0:6:17.62:0,18,126
chr10	51123689	.	GTC	G	3816.82	PASS	AB=0.931;AC=31;AF=0.554;AN=56;BaseQRankSum=6.575;DP=640;FS=0.846;HRun=0;HaplotypeScore=124.1164;InbreedingCoeff=0.4982;MQ=48.71;MQ0=28;MQRankSum=-1.087;QD=10.07;ReadPosRankSum=1.399;VQSLOD=3.5065;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,36:40:33.09:465,33,0	0/1:12,0:12:12.39:18,0,12	0/0:32,0:5:11.98:0,12,99	0/0:64,0:16:23.23:0,23,204	0/0:25,0:25:24.73:0,25,745	0/1:10,2:16:12.96:13,0,54	0/1:23,0:23:29.28:29,0,51	1/1:20,0:19:37.36:283,37,0	0/0:28,0:28:55.92:0,56,891	0/0:23,0:22:46.73:0,47,741	0/0:19,0:19:33.94:0,34,686	1/1:1,25:26:35.99:523,36,0	1/1:11,5:16:20.46:238,20,0	0/0:22,0:22:17.18:0,17,693	1/1:19,1:20:23.04:172,23,0	0/1:24,3:27:15.17:153,0,15	0/0:24,0:24:14.46:0,14,500	1/1:3,12:15:33.04:431,33,0	1/1:17,0:15:32.98:232,33,0	1/1:17,0:17:3.57:45,4,0	1/1:26,1:26:15.43:120,15,0	1/1:2,18:19:16.22:299,16,0	1/1:5,1:5:3.01:43,3,0	1/1:18,11:29:37.45:530,37,0	0/1:15,0:15:1.06:1,0,390	0/0:24,0:24:14.58:0,15,621	0/1:24,2:26:4.65:208,0,5	0/1:6,0:6:14.03:14,0,40
chr10	51123733	.	CTGTGTGTGTG	C	1326	PASS	AB=0.862;AC=11;AF=0.212;AN=52;BaseQRankSum=5.108;DP=707;FS=7.527;HRun=0;HaplotypeScore=192.4373;InbreedingCoeff=0.4192;MQ=47.10;MQ0=34;MQRankSum=-6.037;QD=7.05;ReadPosRankSum=1.172;VQSLOD=1.6762;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:43:21.07:0,21,659	0/0:8,0:7:0:0,0,0	./.	./.	0/0:19,0:20:21.07:0,21,816	1/1:9,8:18:6.02:161,6,0	1/1:17,9:24:3.71:73,4,0	0/1:37,0:33:19.54:20,0,409	0/0:18,0:25:32.85:0,33,983	0/0:21,0:20:51.18:0,51,1821	0/0:16,0:15:24.08:0,24,853	0/0:29,0:29:6.02:0,6,206	0/0:15,0:15:12.01:0,12,382	0/0:25,0:27:48.16:0,48,1687	1/1:14,13:27:2.58:88,3,0	0/1:18,13:31:99:323,0,189	0/0:30,0:29:52.73:0,53,2084	0/0:13,0:13:9.03:0,9,294	0/1:14,1:15:73.56:150,0,74	0/0:12,12:25:0.47:0,0,1	0/0:40,0:36:2.69:0,3,148	0/0:27,0:27:15.05:0,15,430	0/0:3,0:7:6.02:0,6,99	0/0:29,0:29:6.15:0,6,267	0/0:16,0:16:14.61:0,15,488	0/0:23,0:23:45.11:0,45,1490	1/1:13,18:32:23.97:654,24,0	0/0:9,0:8:24.08:0,24,869
chr10	51124923	.	C	CTT	4007.29	PASS	AB=0.596;AC=28;AF=0.500;AN=56;BaseQRankSum=1.726;DP=500;FS=4.216;HRun=11;HaplotypeScore=70.4142;InbreedingCoeff=0.6108;MQ=79.32;MQ0=0;MQRankSum=-1.657;QD=12.64;ReadPosRankSum=-1.624;VQSLOD=1.7383;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:2,15:19:35.61:486,36,0	1/1:1,1:14:6.86:117,7,0	0/0:15,0:15:14.35:0,14,99	0/0:13,0:13:25.05:0,25,215	0/0:25,0:26:44.88:0,45,475	1/1:4,11:19:23.57:313,24,0	1/1:5,8:16:41.98:502,42,0	1/1:10,2:25:11.33:192,11,0	0/0:18,0:19:47.73:0,48,430	0/0:11,0:12:26.75:0,27,245	0/0:21,0:22:50.24:0,50,452	1/1:2,8:12:2.70:43,3,0	1/1:4,14:21:35.05:413,35,0	0/0:12,0:13:26.71:0,27,239	0/1:5,0:20:17.25:79,0,17	1/1:2,0:16:27.45:94,27,0	0/0:14,0:16:32.44:0,32,278	0/1:5,9:14:3.21:276,0,3	0/1:7,0:23:7.22:183,0,7	0/1:9,1:28:1.33:236,0,1	0/1:4,0:13:3.64:52,0,4	1/1:5,13:20:35.37:366,35,0	1/1:7,7:21:32.86:327,33,0	1/1:3,7:13:20.56:269,21,0	0/0:9,0:9:27.02:0,27,255	0/0:24,0:25:59.79:0,60,565	0/1:9,0:23:50.83:58,0,51	0/0:10,0:12:16.51:0,17,189
chr10	51125181	.	CA	C	4364.16	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=11.942;DP=565;FS=11.253;HRun=7;HaplotypeScore=55.6561;InbreedingCoeff=0.9992;MQ=67.27;MQ0=4;MQRankSum=-1.823;QD=25.23;ReadPosRankSum=-0.860;VQSLOD=4.3178;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:84.24:0,84,1019	1/1:0,11:11:30.07:306,30,0	0/0:17,1:17:26.80:0,27,280	0/0:15,1:16:27.82:0,28,350	0/0:19,0:19:54.16:0,54,665	0/0:18,0:18:51.15:0,51,626	0/0:19,0:19:51.15:0,51,627	1/1:6,30:34:84.13:833,84,0	0/0:29,0:29:84.26:0,84,1035	0/0:18,0:18:42.12:0,42,513	0/0:17,0:17:40.37:0,40,492	0/0:24,0:24:66.21:0,66,822	0/0:17,0:17:48.15:0,48,604	0/0:25,0:25:75.24:0,75,942	1/1:2,14:14:36.08:367,36,0	1/1:2,19:21:57.13:581,57,0	0/0:21,0:21:54.17:0,54,679	0/0:25,0:25:72.20:0,72,886	1/1:4,21:23:65.98:656,66,0	1/1:2,23:25:63.13:642,63,0	1/1:1,18:19:42.09:428,42,0	0/0:21,0:21:57.18:0,57,705	0/0:18,0:18:45.13:0,45,554	0/0:14,0:14:36.11:0,36,450	0/0:19,0:19:51.16:0,51,636	0/0:16,0:16:45.12:0,45,550	1/1:1,19:20:54.12:550,54,0	0/0:8,0:8:24.06:0,24,288
chr10	51126356	.	G	GT	17781.10	PASS	AB=0.893;AC=53;AF=0.946;AN=56;BaseQRankSum=0.127;DP=624;FS=12.385;HRun=1;HaplotypeScore=145.2126;InbreedingCoeff=0.6201;MQ=85.85;MQ0=0;MQRankSum=-9.561;QD=29.49;ReadPosRankSum=4.214;VQSLOD=3.2657;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:28,8:36:94.76:991,95,0	1/1:4,0:4:12.01:131,12,0	0/1:22,3:25:94.15:94,0,299	0/0:20,1:21:50.53:0,51,330	1/1:22,6:28:77.27:816,77,0	1/1:14,4:18:53.83:594,54,0	1/1:13,4:17:47.64:509,48,0	1/1:20,15:35:89.94:976,90,0	1/1:19,7:26:71.63:769,72,0	1/1:17,8:25:73.20:828,73,0	1/1:12,10:22:61.34:530,61,0	1/1:13,5:18:51.35:520,51,0	1/1:25,4:29:83.72:915,84,0	1/1:19,3:22:62.69:684,63,0	1/1:20,9:29:77.52:855,78,0	1/1:15,5:20:59.54:633,60,0	1/1:22,4:26:74.81:831,75,0	1/1:10,2:12:35.65:357,36,0	1/1:15,5:21:60.10:718,60,0	1/1:21,8:29:83.85:951,84,0	1/1:13,6:19:41.88:449,42,0	1/1:18,3:21:62.71:702,63,0	1/1:18,7:25:74.26:806,74,0	1/1:12,2:14:36.10:436,36,0	1/1:12,3:15:44.96:510,45,0	1/1:20,5:25:69.03:830,69,0	1/1:33,5:37:99:1211,111,0	1/1:4,0:4:12.01:135,12,0
chr10	51126359	.	TC	T	13922.47	PASS	AB=0.880;AC=53;AF=0.946;AN=56;BaseQRankSum=0.435;DP=598;FS=15.003;HRun=2;HaplotypeScore=150.4967;InbreedingCoeff=0.7629;MQ=84.67;MQ0=0;MQRankSum=-9.180;QD=24.09;ReadPosRankSum=4.489;VQSLOD=3.3210;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:26,8:34:90.81:798,91,0	1/1:3,1:4:12.03:130,12,0	0/0:20,0:20:55.61:0,56,363	0/1:19,2:22:2.05:2,0,271	1/1:21,5:26:74.61:680,75,0	1/1:14,3:17:49.82:436,50,0	1/1:12,4:16:46.18:412,46,0	1/1:16,17:33:94.91:895,95,0	1/1:19,7:26:72.85:634,73,0	1/1:17,8:25:66.17:655,66,0	1/1:13,10:23:59.26:428,59,0	1/1:12,5:17:37.45:296,37,0	1/1:23,3:26:73.24:671,73,0	1/1:18,4:22:64.27:597,64,0	1/1:19,8:27:63.36:543,63,0	1/1:14,5:19:51.68:453,52,0	1/1:23,3:26:76.53:704,77,0	1/1:11,2:13:37.35:323,37,0	1/1:12,6:18:50.88:526,51,0	1/1:22,6:28:76.55:680,77,0	1/1:13,6:19:44.11:403,44,0	1/1:19,3:22:61.32:576,61,0	1/1:17,5:22:56.49:471,56,0	1/1:11,1:12:33.06:326,33,0	1/1:12,3:15:44.42:423,44,0	1/1:20,6:26:77.45:797,77,0	1/1:32,5:37:99:988,109,0	1/1:3,0:3:8.91:75,9,0
chr10	51126554	.	CA	C	12306.93	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=6.539;DP=607;FS=3.003;HRun=2;HaplotypeScore=101.0550;InbreedingCoeff=0.9911;MQ=74.09;MQ0=0;MQRankSum=-1.224;QD=35.16;ReadPosRankSum=-0.829;VQSLOD=4.5451;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,19:19:51.17:662,51,0	1/1:0,9:9:27.09:351,27,0	0/0:10,0:10:30.10:0,30,450	0/0:12,0:12:35.84:0,36,476	0/0:33,0:33:99:0,99,1481	1/1:0,21:21:60.20:779,60,0	1/1:0,13:13:39.13:506,39,0	1/1:2,27:29:81.25:1036,81,0	0/0:19,0:19:54.16:0,54,771	0/0:35,0:35:99:0,105,1558	0/0:27,0:27:81.27:0,81,1197	1/1:0,12:12:33.11:428,33,0	1/1:0,18:18:48.16:623,48,0	0/0:23,0:23:66.22:0,66,989	1/1:0,29:29:81.26:1051,81,0	1/1:0,17:17:42.14:545,42,0	0/0:25,0:25:75.25:0,75,1114	1/1:1,14:15:36.12:464,36,0	1/1:1,19:20:57.18:739,57,0	1/1:2,44:46:99:1629,126,0	1/1:1,17:18:48.16:623,48,0	1/1:1,21:22:63.20:812,63,0	1/1:0,20:20:51.16:662,51,0	1/1:0,11:11:24.08:312,24,0	0/0:30,0:30:90.30:0,90,1349	0/0:40,0:40:99:0,117,1739	1/1:0,31:31:84.27:1086,84,0	0/0:3,0:3:9.03:0,9,135
chr10	51127383	.	G	GA	5097.45	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-12.744;DP=649;FS=7.336;HRun=9;HaplotypeScore=60.9470;InbreedingCoeff=0.9507;MQ=75.41;MQ0=0;MQRankSum=-0.448;QD=24.51;ReadPosRankSum=2.598;VQSLOD=5.7194;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,22:23:60.16:664,60,0	0/0:8,0:8:17.99:0,18,156	0/0:13,0:13:32.78:0,33,272	0/0:14,0:14:6.01:0,6,94	0/0:22,0:22:53.96:0,54,465	1/1:6,27:32:75.20:830,75,0	1/1:3,15:18:42.11:463,42,0	0/0:37,0:37:89.93:0,90,776	0/0:27,0:27:62.93:0,63,539	0/0:36,0:36:56.93:0,57,713	0/0:23,0:23:53.97:0,54,469	1/1:5,16:22:50.97:545,51,0	1/1:7,13:21:18.90:418,19,0	0/0:17,0:17:41.93:0,42,357	0/0:15,1:16:16.44:0,16,267	0/0:17,0:17:44.99:0,45,391	0/0:26,0:26:68.93:0,69,589	1/1:1,7:9:20.89:213,21,0	0/0:19,0:19:44.97:0,45,391	0/0:30,1:31:41.80:0,42,592	0/0:8,0:8:20.99:0,21,182	1/1:6,32:38:81.22:896,81,0	1/1:7,22:29:34.11:605,34,0	1/1:1,14:15:42.11:465,42,0	0/0:30,0:30:83.96:0,84,726	0/0:44,0:44:99:0,102,882	0/0:38,0:38:97.98:0,98,839	0/0:13,1:14:2.81:0,3,253
chr10	51128279	.	GA	G	7088.25	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=15.551;DP=720;FS=0.309;HRun=2;HaplotypeScore=67.7197;InbreedingCoeff=0.9996;MQ=87.81;MQ0=0;MQRankSum=-6.959;QD=37.11;ReadPosRankSum=3.064;VQSLOD=5.4840;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,42:43:99:1597,123,0	0/0:15,0:15:45.15:0,45,673	0/0:28,0:28:84.28:0,84,1210	0/0:22,0:22:54.18:0,54,795	0/0:24,0:24:69.23:0,69,1034	0/0:26,0:26:78.26:0,78,1169	0/0:17,0:17:51.16:0,51,743	0/0:33,0:33:90.30:0,90,1326	0/0:21,0:21:63.21:0,63,944	0/0:37,0:37:99:0,111,1639	0/0:22,0:22:66.21:0,66,969	1/1:1,26:27:75.24:974,75,0	1/1:1,21:22:63.20:818,63,0	0/0:20,0:20:60.19:0,60,881	0/0:36,0:36:99:0,105,1573	0/0:21,0:21:63.21:0,63,943	0/0:19,0:19:57.19:0,57,854	1/1:0,20:20:60.20:779,60,0	0/0:23,0:23:66.22:0,66,983	0/0:41,0:41:99:0,123,1801	0/0:35,0:35:99:0,105,1532	1/1:0,30:30:87.28:1128,87,0	1/1:0,19:19:57.19:740,57,0	1/1:0,30:30:81.26:1052,81,0	0/0:22,0:22:66.22:0,66,984	0/0:30,0:30:90.30:0,90,1349	0/0:28,0:27:84.26:0,84,1218	0/0:9,0:9:24.06:0,24,338
chr10	51128959	.	C	CTCATCT	4193.73	PASS	AB=0.964;AC=8;AF=0.143;AN=56;BaseQRankSum=9.713;DP=684;FS=35.812;HRun=0;HaplotypeScore=138.3640;InbreedingCoeff=-0.1691;MQ=76.65;MQ0=2;MQRankSum=-11.418;QD=25.11;ReadPosRankSum=0.744;VQSLOD=1.7079;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:69.10:0,69,1263	0/1:13,0:12:59.89:521,0,60	0/0:35,0:28:56.28:0,56,706	0/0:31,0:25:41.71:0,42,553	0/0:28,0:28:72.19:0,72,1388	0/0:25,0:25:60.14:0,60,1099	0/0:21,0:21:51.76:0,52,908	0/1:26,0:26:99:163,0,156	0/0:26,0:26:72.16:0,72,1318	0/0:34,0:34:99:0,99,1776	0/0:27,0:27:66.20:0,66,1302	0/0:26,0:25:63.11:0,63,1025	0/0:37,0:37:99:0,105,2054	0/0:19,0:19:51.13:0,51,947	0/1:28,0:28:61.93:1062,0,62	0/1:23,0:23:99:609,0,111	0/0:21,0:21:53.97:0,54,911	0/0:16,0:16:42.01:0,42,660	0/1:12,0:12:99:162,0,163	0/1:23,0:23:56.87:864,0,57	0/1:9,6:15:66.69:67,0,77	0/0:28,0:28:72.07:0,72,1063	0/0:28,0:28:75.17:0,75,1521	0/0:17,0:17:48.12:0,48,933	0/0:31,0:31:75.11:0,75,1280	0/0:29,0:29:69.15:0,69,1201	0/1:27,0:27:99:747,0,136	0/0:10,0:10:9.61:0,10,511
chr10	51128965	.	T	TTCATCC	5874.88	PASS	AB=0.636;AC=15;AF=0.268;AN=56;BaseQRankSum=-9.312;DP=681;FS=22.968;HRun=0;HaplotypeScore=131.4499;InbreedingCoeff=0.8727;MQ=74.70;MQ0=2;MQRankSum=-9.540;QD=34.56;ReadPosRankSum=0.153;VQSLOD=2.8931;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:69.21:0,69,1327	1/1:7,6:12:21.07:683,21,0	0/0:35,0:28:37.15:0,37,616	0/0:30,0:24:18.93:0,19,322	0/0:29,0:29:66.18:0,66,1232	0/0:26,0:26:57.13:0,57,1004	0/0:22,0:22:45.13:0,45,818	1/1:19,0:19:18.06:290,18,0	0/0:26,0:26:66.20:0,66,1282	0/0:35,0:35:75.25:0,75,1546	0/0:24,0:24:66.20:0,66,1284	0/0:25,0:24:45.14:0,45,894	0/0:37,0:37:93.30:0,93,1865	0/0:19,0:19:54.17:0,54,1062	1/1:9,20:30:48.16:1416,48,0	1/1:7,12:22:24.08:782,24,0	0/0:22,0:22:42.13:0,42,817	0/0:19,0:19:39.03:0,39,677	0/1:6,6:14:36.63:382,0,37	1/1:7,18:26:50.94:1230,51,0	1/1:14,1:15:3.01:99,3,0	0/0:27,0:27:60.12:0,60,1062	0/0:27,0:27:75.24:0,75,1528	0/0:17,0:17:42.14:0,42,879	0/0:27,0:27:57.20:0,57,1154	0/0:26,0:26:54.18:0,54,1090	1/1:13,17:31:30.10:993,30,0	0/0:9,0:9:24.97:0,25,511
chr10	51129093	.	AAGAGGTC	A	8780.09	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=14.889;DP=691;FS=14.807;HRun=0;HaplotypeScore=162.9241;InbreedingCoeff=0.9921;MQ=86.54;MQ0=0;MQRankSum=-14.830;QD=55.57;ReadPosRankSum=0.733;VQSLOD=4.1332;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:81.28:0,81,3077	1/1:0,7:7:15.05:374,15,0	0/0:38,0:37:98.82:0,99,3216	0/0:21,0:21:54.15:0,54,1670	0/0:38,0:38:99:0,105,3880	0/0:38,0:38:99:0,108,4029	0/0:22,0:22:54.19:0,54,2073	1/1:3,21:24:63.19:1411,63,0	0/0:31,0:31:84.27:0,84,3089	0/0:31,0:31:87.30:0,87,3250	0/0:20,0:20:57.20:0,57,2080	0/0:21,0:21:54.19:0,54,1999	0/0:26,0:26:66.23:0,66,2475	0/0:24,0:24:63.22:0,63,2383	1/1:2,18:20:45.15:1118,45,0	1/1:2,15:17:42.14:1027,42,0	0/0:29,0:29:87.30:0,87,3184	0/0:16,0:16:48.16:0,48,1756	1/1:2,10:12:30.09:676,30,0	1/1:6,23:29:60.21:1471,60,0	1/1:1,8:9:12.04:276,12,0	0/0:22,0:22:66.21:0,66,2335	0/0:24,0:24:66.23:0,66,2419	0/0:21,0:21:57.20:0,57,2201	0/0:33,0:32:96.32:0,96,3630	0/0:31,0:31:87.29:0,87,3195	1/1:6,34:40:99:2426,99,0	0/0:18,0:18:54.19:0,54,2103
chr10	51129457	.	TTGTGTGTGTGTGTGTGTGTGTGTGTG	T	2876.89	PASS	AB=1.000;AC=11;AF=0.204;AN=54;BaseQRankSum=7.021;DP=644;FS=0.766;HRun=0;HaplotypeScore=336.4432;InbreedingCoeff=0.7382;MQ=64.69;MQ0=10;MQRankSum=-1.660;QD=24.38;ReadPosRankSum=1.704;VQSLOD=1.3008;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:49.58:0,50,3812	1/1:8,0:8:3.01:34,3,0	0/0:44,0:23:11.99:0,12,344	0/0:41,0:28:32.85:0,33,999	0/0:19,0:20:15.94:0,16,1518	0/0:16,0:22:18.53:0,19,1162	0/0:23,0:32:43.09:0,43,2949	1/1:11,11:20:32.91:344,33,0	0/0:15,0:15:25.02:0,25,2462	0/0:26,0:25:65.03:0,65,5799	0/0:12,0:12:23.68:0,24,2637	0/0:9,0:12:20.10:0,20,1344	0/0:15,0:17:27.56:0,28,2640	0/0:19,0:19:24.55:0,25,2463	1/1:14,15:29:12.04:812,12,0	1/1:7,18:25:14.28:1014,14,0	0/0:40,0:41:84.27:0,84,7959	0/0:26,0:28:58.08:0,58,4233	0/1:16,0:15:19.98:20,0,32	./.	0/0:23,27:50:0.47:0,0,1	0/0:14,0:19:19:0,19,1781	0/0:8,0:14:3.01:0,3,316	0/0:26,0:26:30.95:0,31,2526	0/0:16,0:16:24.08:0,24,1898	0/0:25,0:25:46.40:0,46,4034	1/1:8,10:18:12.95:815,13,0	0/0:3,0:3:6.02:0,6,345
chr10	51130098	.	TC	T	722.32	PASS	AB=1.000;AC=11;AF=0.262;AN=42;BaseQRankSum=3.494;DP=369;FS=0.000;HRun=4;HaplotypeScore=42.5687;InbreedingCoeff=0.6333;MQ=25.02;MQ0=153;MQRankSum=0.866;QD=10.32;ReadPosRankSum=1.418;VQSLOD=0.4894;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:2:2.99:0,3,23	1/1:0,2:1:3.01:36,3,0	./.	./.	0/0:20,0:20:20.98:0,21,268	0/0:9,0:7:6.02:0,6,84	0/0:10,0:3:8.96:0,9,102	./.	0/0:12,0:10:6.02:0,6,84	0/0:20,0:20:48.06:0,48,611	0/0:15,0:15:15.05:0,15,209	0/0:11,0:7:2.58:0,3,23	0/0:17,0:10:8.62:0,9,68	0/0:19,0:12:21:0,21,269	1/1:0,17:12:15.05:180,15,0	1/1:0,17:10:27.08:323,27,0	./.	./.	./.	1/1:1,6:4:6.02:72,6,0	./.	0/1:12,0:12:1.94:2,0,97	0/0:9,0:7:11.96:0,12,94	0/0:12,0:3:2.99:0,3,24	0/0:22,0:21:29.62:0,30,373	0/0:26,0:20:54.17:0,54,734	1/1:0,15:14:21.06:252,21,0	0/0:8,0:2:5.99:0,6,64
chr10	51130762	.	TC	T	368.07	PASS	AC=8;AF=0.222;AN=36;BaseQRankSum=2.923;DP=264;FS=0.000;HRun=4;HaplotypeScore=19.1066;InbreedingCoeff=0.6096;MQ=20.86;MQ0=161;MQRankSum=2.480;QD=7.51;ReadPosRankSum=-1.298;VQSLOD=-0.4878;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	1/1:0,8:4:12.04:144,12,0	./.	./.	0/0:12,0:11:15.05:0,15,209	0/0:10,0:5:6.02:0,6,80	0/0:7,0:2:3.01:0,3,42	./.	0/0:11,0:4:6.02:0,6,84	0/0:9,0:8:21.07:0,21,294	0/0:10,0:10:6.02:0,6,75	./.	0/0:7,0:4:5.99:0,6,50	0/0:8,0:4:3.01:0,3,42	./.	1/1:2,10:5:9.03:108,9,0	./.	0/0:12,0:1:2.99:0,3,23	./.	1/1:1,15:7:12.04:144,12,0	./.	0/0:4,0:4:0.88:0,1,2	0/0:7,0:7:5.99:0,6,49	./.	0/0:6,0:5:12.04:0,12,168	0/0:11,0:3:9.03:0,9,126	1/1:2,11:8:9.02:98,9,0	0/0:11,0:7:12.04:0,12,164
chr10	51131440	.	C	CGATGAT	4545.59	PASS	AB=0.863;AC=31;AF=0.554;AN=56;BaseQRankSum=8.443;DP=671;FS=1.417;HRun=0;HaplotypeScore=193.6080;InbreedingCoeff=0.6466;MQ=67.22;MQ0=1;MQRankSum=-2.677;QD=10.40;ReadPosRankSum=-1.453;VQSLOD=3.8937;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:37,0:35:8.96:114,9,0	1/1:4,0:4:8.50:98,9,0	0/0:26,0:24:20.57:0,21,306	0/0:26,0:24:29.61:0,30,498	0/0:24,0:24:57.14:0,57,1058	1/1:7,0:19:4.11:152,4,0	1/1:35,0:32:36.54:481,37,0	1/1:14,0:14:25.25:148,25,0	0/0:35,0:35:87.25:0,87,1688	0/0:18,0:18:42.14:0,42,808	0/0:10,0:10:27.09:0,27,504	1/1:18,16:35:21.01:489,21,0	1/1:9,11:20:10.55:270,11,0	0/1:28,0:29:18.69:19,0,1191	1/1:39,0:39:38.45:815,38,0	1/1:30,0:30:42.62:897,43,0	0/0:46,0:46:99:0,108,1932	1/1:19,10:31:33.11:758,33,0	0/1:22,0:21:21.90:108,0,22	1/1:14,0:14:7.82:69,8,0	1/1:25,0:25:8.03:56,8,0	0/1:4,9:13:0:0,0,0	1/1:13,0:12:2.99:24,3,0	0/1:18,9:29:0.09:0,0,0	0/0:26,0:26:63.18:0,63,1221	0/0:15,0:15:36.08:0,36,695	0/1:27,0:26:46.48:46,0,167	0/0:7,0:8:15.05:0,15,291
chr10	51131462	.	G	GACGACG	1548.83	PASS	AB=1.000;AC=26;AF=0.464;AN=56;BaseQRankSum=7.450;DP=709;FS=0.476;HRun=0;HaplotypeScore=197.1471;InbreedingCoeff=0.3826;MQ=49.78;MQ0=4;MQRankSum=-4.370;QD=3.57;ReadPosRankSum=-3.163;VQSLOD=1.7751;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:27,18:47:1.87:5,2,0	0/1:6,0:6:7.97:8,0,85	0/0:22,0:18:35.74:0,36,454	0/0:29,0:23:31.22:0,31,438	0/0:29,0:29:69.20:0,69,1204	0/1:23,0:23:56.79:57,0,237	0/1:34,0:31:11.87:12,0,270	1/1:22,0:22:10.52:62,11,0	0/0:33,0:33:84.24:0,84,1661	0/0:22,0:22:54.14:0,54,919	0/0:14,0:14:30.09:0,30,548	1/1:37,0:36:33.21:320,33,0	1/1:21,0:21:9.77:67,10,0	0/0:30,0:30:71.97:0,72,1287	0/1:36,0:36:33.95:34,0,390	0/1:26,0:26:99:182,0,205	0/0:44,0:44:96.21:0,96,1704	1/1:32,0:32:43.02:490,43,0	0/1:21,0:19:74.18:96,0,74	0/1:16,0:16:4.59:40,0,5	1/1:32,0:32:5.93:40,6,0	1/1:16,0:16:8.64:79,9,0	1/1:11,0:10:9.02:121,9,0	1/1:31,0:31:10.58:118,11,0	0/0:27,0:27:72.18:0,72,1240	0/0:17,0:17:45.12:0,45,830	0/1:21,0:21:12.44:12,0,256	0/0:8,0:8:21.07:0,21,378
chr10	51131471	.	GACA	G	2075.67	PASS	AB=0.964;AC=23;AF=0.411;AN=56;BaseQRankSum=9.249;DP=719;FS=20.784;HRun=0;HaplotypeScore=162.5660;InbreedingCoeff=0.2315;MQ=49.80;MQ0=3;MQRankSum=-3.239;QD=4.74;ReadPosRankSum=-4.698;VQSLOD=-0.0643;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:50,0:48:0.71:92,0,1	0/1:5,1:6:12.90:55,0,13	0/0:23,0:19:50.44:0,50,626	0/0:27,0:22:55.43:0,55,702	0/0:31,0:31:84.20:0,84,1454	0/1:24,0:24:30.98:31,0,92	0/1:35,0:32:56.99:140,0,57	1/1:23,2:25:18.82:146,19,0	0/0:31,0:31:90.26:0,90,1828	0/0:25,0:25:75.13:0,75,1169	0/0:14,0:14:42.11:0,42,715	0/1:37,0:36:27.18:95,0,27	0/1:24,0:24:0.58:91,0,1	0/0:31,0:31:77.35:0,77,1477	0/1:25,7:32:53.99:232,0,54	0/1:25,2:27:34.45:204,0,34	0/0:41,0:41:99:0,120,2052	0/1:35,0:35:99:168,0,108	1/1:13,4:16:14.58:222,15,0	1/1:12,3:15:10.07:100,10,0	1/1:5,22:27:3.31:31,3,0	1/1:17,0:17:14.94:91,15,0	0/1:12,0:11:20.26:21,0,20	0/1:30,0:30:18.72:51,0,19	0/0:28,0:28:84.12:0,84,1434	0/0:21,0:21:63.14:0,63,1059	1/1:0,25:25:36.08:492,36,0	0/0:8,0:8:22.63:0,23,401
chr10	51131482	.	CGATGACGAT	C	1352.97	PASS	AB=0.862;AC=9;AF=0.161;AN=56;BaseQRankSum=7.305;DP=770;FS=4.279;HRun=0;HaplotypeScore=247.2003;InbreedingCoeff=0.3238;MQ=54.83;MQ0=2;MQRankSum=-2.373;QD=7.60;ReadPosRankSum=-7.170;VQSLOD=0.5120;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:46:34.48:0,34,962	0/0:4,0:5:8.96:0,9,123	0/0:24,0:20:60.08:0,60,1362	0/0:37,0:29:77.87:0,78,2242	0/0:37,0:37:95.97:0,96,2922	0/0:28,0:28:40.34:0,40,902	0/0:38,0:35:34.12:0,34,1086	1/1:2,20:24:50.04:446,50,0	0/0:34,0:34:99:0,102,3499	0/0:29,0:29:84.21:0,84,3005	0/0:16,0:16:45.11:0,45,1393	0/0:41,0:40:72.18:0,72,1961	0/0:30,0:30:51.31:0,51,1178	0/0:29,0:29:78.17:0,78,2999	0/1:30,1:34:99:347,0,392	0/1:24,0:25:99:167,0,349	0/0:36,0:36:99:0,102,3972	0/0:38,0:38:42.42:0,42,1947	0/1:16,0:17:40.74:253,0,41	0/1:3,15:19:23.18:32,0,23	1/1:28,0:28:14.67:94,15,0	0/0:16,0:16:23.41:0,23,623	0/0:17,0:16:27.09:0,27,762	0/0:32,0:32:34.81:0,35,1130	0/0:24,0:24:72.06:0,72,2225	0/0:24,0:24:72.24:0,72,2732	0/1:30,0:31:99:165,0,203	0/0:9,0:9:24.08:0,24,973
chr10	51132162	.	GGTGT	G	13806.24	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=13.736;DP=747;FS=4.373;HRun=0;HaplotypeScore=129.5542;InbreedingCoeff=0.9978;MQ=64.92;MQ0=5;MQRankSum=-1.499;QD=29.69;ReadPosRankSum=2.886;VQSLOD=4.9266;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,25:39:45.14:778,45,0	1/1:0,8:8:18.06:311,18,0	0/0:29,0:22:39.12:0,39,666	0/0:29,0:23:47.78:0,48,948	0/0:33,0:33:87.28:0,87,2016	1/1:1,23:24:45.15:777,45,0	1/1:8,20:28:45.15:777,45,0	1/1:6,21:27:63.17:988,63,0	0/0:23,0:23:63.20:0,63,1501	0/0:31,0:31:84.29:0,84,2054	0/0:24,0:24:63.20:0,63,1525	1/1:4,26:29:63.22:1088,63,0	1/1:3,21:23:48.16:829,48,0	0/0:21,0:21:51.16:0,51,1192	1/1:6,29:35:60.20:1036,60,0	1/1:5,32:38:63.10:1064,63,0	0/0:28,0:28:68.93:0,69,1501	1/1:2,18:20:24.08:415,24,0	1/1:8,8:16:21:279,21,0	1/1:3,27:30:63.16:1030,63,0	1/1:9,32:41:57.19:985,57,0	1/1:2,30:33:62.82:1064,63,0	1/1:1,23:24:63.22:1089,63,0	1/1:6,20:26:36.12:622,36,0	0/0:13,0:13:27.09:0,27,671	0/0:27,0:27:72.24:0,72,1721	1/1:6,16:22:39.10:673,39,0	0/0:23,0:23:60.21:0,60,1472
chr10	51132453	.	G	GA	7030.50	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=10.835;DP=690;FS=5.359;HRun=6;HaplotypeScore=75.1676;InbreedingCoeff=0.9998;MQ=85.93;MQ0=0;MQRankSum=-1.221;QD=32.40;ReadPosRankSum=0.660;VQSLOD=5.1916;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:57.13:0,57,581	1/1:0,12:12:33.11:415,33,0	0/0:27,0:27:69.13:0,69,694	0/0:18,0:18:29.20:0,29,312	0/0:27,0:27:72.14:0,72,727	0/0:29,0:28:81.17:0,81,820	0/0:20,0:20:51.10:0,51,514	1/1:7,38:45:99:1330,108,0	0/0:23,0:23:54.11:0,54,551	0/0:36,0:36:96.21:0,96,979	0/0:34,0:34:87.06:0,87,853	0/0:22,0:22:60.12:0,60,607	0/0:20,0:20:54.12:0,54,550	0/0:33,0:33:87.15:0,87,866	1/1:1,25:26:69.22:867,69,0	1/1:2,21:23:54.17:679,54,0	0/0:26,0:26:69.15:0,69,704	0/0:13,0:13:36.06:0,36,359	1/1:3,16:19:51.15:627,51,0	1/1:0,30:30:90.29:1132,90,0	1/1:0,16:16:45.08:546,45,0	0/0:24,0:24:63.13:0,63,636	0/0:21,0:21:57.13:0,57,581	0/0:18,0:18:51.12:0,51,520	0/0:18,0:18:48.10:0,48,489	0/0:24,0:24:65.72:0,66,645	1/1:4,42:44:99:1434,114,0	0/0:18,0:18:54.12:0,54,551
chr10	51132825	.	G	GA	3585.61	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-0.402;DP=649;FS=4.689;HRun=9;HaplotypeScore=75.7189;InbreedingCoeff=0.9691;MQ=65.33;MQ0=26;MQRankSum=0.563;QD=21.86;ReadPosRankSum=-1.749;VQSLOD=3.8502;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:51:99:0,135,1171	1/1:2,6:8:15.04:166,15,0	0/0:17,0:16:29.57:0,30,303	0/0:14,0:10:26.97:0,27,230	0/0:41,0:39:76.30:0,76,808	0/0:33,0:29:80.97:0,81,703	0/0:26,0:25:59.98:0,60,520	1/1:7,28:35:60.85:881,61,0	0/0:20,0:20:47.95:0,48,412	0/0:23,0:21:59.58:0,60,505	0/0:21,0:21:23.01:0,23,415	0/0:16,0:15:35.99:0,36,312	0/0:19,0:18:50.99:0,51,442	0/0:17,0:15:40.22:0,40,338	1/1:3,18:21:33.07:355,33,0	1/1:3,19:21:48.13:531,48,0	0/0:34,0:33:92.24:0,92,803	0/0:24,0:24:50.98:0,51,443	1/1:6,21:26:40.09:671,40,0	1/1:10,13:21:36.06:385,36,0	1/1:1,5:6:6.02:66,6,0	0/0:23,0:22:50.97:0,51,440	0/0:18,0:18:41.98:0,42,363	0/0:30,0:30:71.96:0,72,625	0/0:23,0:21:53.97:0,54,466	0/0:27,0:26:74.98:0,75,651	1/1:2,20:21:48.13:531,48,0	0/0:4,0:3:9:0,9,78
chr10	51136484	.	C	CCA	12341.44	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=13.895;DP=677;FS=1.321;HRun=0;HaplotypeScore=97.8242;InbreedingCoeff=0.9999;MQ=87.78;MQ0=0;MQRankSum=-3.097;QD=50.37;ReadPosRankSum=2.892;VQSLOD=5.4696;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,47:49:99:2605,135,0	0/0:11,0:11:30.10:0,30,456	0/0:29,0:29:78.24:0,78,1127	0/0:22,0:21:39.71:0,40,837	0/0:24,0:24:66.22:0,66,1009	1/1:1,19:21:51.17:983,51,0	1/1:5,27:32:81.28:1559,81,0	0/0:32,0:32:93.29:0,93,1365	0/0:14,0:14:42.14:0,42,643	0/0:31,0:31:93.32:0,93,1422	0/0:13,0:13:39.13:0,39,596	1/1:0,23:23:66.23:1269,66,0	1/1:3,19:22:54.18:1021,54,0	0/0:20,0:20:60.20:0,60,917	0/0:20,0:20:54.18:0,54,826	0/0:20,0:20:57.18:0,57,850	0/0:31,0:31:90.31:0,90,1378	1/1:1,24:25:75.26:1434,75,0	0/0:21,0:21:63.21:0,63,965	0/0:25,0:25:72.24:0,72,1100	0/0:41,0:41:99:0,120,1792	1/1:1,15:16:45.15:865,45,0	1/1:0,20:21:50.95:984,51,0	1/1:5,31:35:83.95:1620,84,0	0/0:25,0:25:72.24:0,72,1101	0/0:14,0:14:42.13:0,42,622	0/0:26,0:26:78.25:0,78,1170	0/0:13,0:13:39.13:0,39,597
chr10	51137563	.	GC	G	3937.64	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=13.839;DP=566;FS=9.810;HRun=8;HaplotypeScore=86.1123;InbreedingCoeff=0.9951;MQ=72.29;MQ0=0;MQRankSum=-1.068;QD=22.37;ReadPosRankSum=3.004;VQSLOD=3.8946;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,23:26:60.09:579,60,0	0/0:1,0:8:23.07:0,23,123	0/0:17,0:16:13.95:0,14,238	0/0:15,0:15:20.71:0,21,211	0/0:27,0:27:65.01:0,65,848	1/1:4,29:31:75.12:724,75,0	1/1:3,12:15:30.05:290,30,0	0/0:27,0:27:41.29:0,41,697	0/0:13,0:14:38.97:0,39,430	0/0:30,0:30:84.25:0,84,1004	0/0:25,0:25:72.21:0,72,857	1/1:1,12:13:33.05:318,33,0	1/1:0,20:20:51.08:492,51,0	0/0:18,0:18:42.12:0,42,497	0/0:1,0:15:40.22:0,40,204	0/0:3,0:17:45.42:0,45,236	0/0:24,0:24:69.21:0,69,833	1/1:1,9:10:24.04:232,24,0	0/0:11,0:12:32.95:0,33,365	0/0:32,0:32:87.25:0,87,1037	0/0:12,0:12:36.10:0,36,423	1/1:3,11:14:33.05:319,33,0	1/1:3,26:29:65.95:638,66,0	1/1:3,13:16:36.05:348,36,0	0/0:29,0:29:78.24:0,78,935	0/0:20,0:20:51.13:0,51,602	0/0:33,0:33:93.29:0,93,1122	0/0:15,0:15:33.10:0,33,399
chr10	51137676	.	T	TTG	6429.36	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=9.656;DP=624;FS=8.462;HRun=0;HaplotypeScore=105.5098;InbreedingCoeff=0.9984;MQ=61.97;MQ0=12;MQRankSum=-0.440;QD=35.33;ReadPosRankSum=1.490;VQSLOD=6.4297;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,13:21:51.12:798,51,0	0/0:12,0:11:33.07:0,33,419	0/0:30,0:22:49.78:0,50,641	0/0:22,0:17:35.66:0,36,403	0/0:33,0:33:81.05:0,81,1013	1/1:14,15:28:69.22:1133,69,0	1/1:1,21:22:36.10:608,36,0	0/0:32,0:32:75.21:0,75,972	0/0:14,0:14:33.11:0,33,438	0/0:27,0:25:65.63:0,66,845	0/0:29,0:29:66.17:0,66,831	1/1:7,9:16:43.85:594,44,0	1/1:6,10:15:24.08:415,24,0	0/0:20,0:20:51.15:0,51,664	0/0:26,0:22:63.03:0,63,761	0/0:12,0:10:24.01:0,24,281	0/0:30,0:30:75.17:0,75,942	1/1:4,9:13:31.33:550,31,0	0/0:11,0:11:20.55:0,21,249	0/0:27,0:27:65.75:0,66,825	0/0:18,0:17:42.14:0,42,558	1/1:7,12:20:57.18:929,57,0	1/1:4,16:21:36.12:623,36,0	1/1:3,20:22:45.14:779,45,0	0/0:28,0:28:74.95:0,75,957	0/0:26,0:26:64.94:0,65,726	0/0:26,0:26:72.20:0,72,917	0/0:18,0:18:50.16:0,50,610
chr10	51137712	.	G	GGA	672.88	PASS	AB=0.982;AC=25;AF=0.481;AN=52;BaseQRankSum=0.167;DP=641;FS=0.000;HRun=0;HaplotypeScore=126.7901;InbreedingCoeff=0.2401;MQ=52.35;MQ0=38;MQRankSum=1.452;QD=2.04;ReadPosRankSum=0.017;VQSLOD=2.4228;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:20:0.37:2,0,0	0/0:5,0:4:0.88:0,1,2	./.	./.	0/0:20,0:26:3.31:0,3,15	0/0:22,0:17:0.89:0,1,2	0/0:18,0:17:3.43:0,3,15	0/1:31,0:31:0.51:1,0,1	0/0:15,0:14:15.43:0,15,137	0/1:19,0:19:4.89:14,0,5	0/0:10,0:17:0.47:0,0,1	1/1:9,0:9:4.21:13,4,0	1/1:15,0:14:7.03:38,7,0	0/1:16,0:18:9.16:9,0,15	1/1:22,0:17:1.55:4,2,0	0/1:10,0:8:0:0,0,0	0/0:32,0:32:38.02:0,38,397	0/0:11,0:11:4.37:0,4,20	1/1:17,0:16:10.92:149,11,0	1/1:22,7:29:1.79:58,2,0	0/1:24,0:20:13.40:14,0,13	1/1:14,0:14:6.23:37,6,0	1/1:16,0:16:0.47:1,0,0	1/1:23,0:22:1.36:3,1,0	0/0:30,0:30:13.97:0,14,118	0/1:26,3:29:20.37:190,0,20	0/1:26,1:26:25.75:272,0,26	0/0:22,0:20:5.76:0,6,47
chr10	51137740	.	AG	A	393.26	PASS	AB=0.657;AC=4;AF=0.074;AN=54;BaseQRankSum=2.963;DP=553;FS=3.224;HRun=1;HaplotypeScore=117.9309;InbreedingCoeff=0.4426;MQ=44.83;MQ0=37;MQRankSum=-4.297;QD=13.11;ReadPosRankSum=-0.406;VQSLOD=2.5102;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:24:25.92:0,26,367	0/1:2,2:3:31.49:31,0,34	./.	0/0:23,0:1:2.88:0,3,15	0/0:24,0:22:31.31:0,31,350	0/0:23,0:17:32.78:0,33,362	0/0:10,0:9:14.23:0,14,125	0/0:34,0:32:87.28:0,87,1105	0/0:18,1:18:16.60:0,17,609	0/0:25,0:21:55.11:0,55,687	0/0:17,0:17:23.88:0,24,303	0/0:11,0:11:25.87:0,26,303	0/0:13,0:11:16.12:0,16,157	0/0:19,0:19:30.78:0,31,316	1/1:4,11:10:27.08:328,27,0	0/1:5,6:9:5.43:147,0,5	0/0:32,0:31:77.23:0,77,1043	0/0:12,0:12:23.60:0,24,325	0/0:17,0:16:48.14:0,48,601	0/0:28,0:27:54.10:0,54,660	0/0:24,0:20:39.02:0,39,505	0/0:11,0:10:3.32:0,3,234	0/0:16,0:16:23.94:0,24,304	0/0:22,0:21:20.63:0,21,252	0/0:29,0:29:66.05:0,66,883	0/0:28,0:28:75.07:0,75,906	0/0:27,0:26:69.20:0,69,890	0/0:23,0:20:53.20:0,53,680
chr10	51137750	.	AGAG	A	192.60	PASS	AB=0.829;AC=3;AF=0.054;AN=56;BaseQRankSum=3.834;DP=518;FS=4.408;HRun=0;HaplotypeScore=128.5879;InbreedingCoeff=-0.0716;MQ=44.73;MQ0=25;MQRankSum=-3.776;QD=4.82;ReadPosRankSum=-1.399;VQSLOD=2.5098;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:24:35.28:0,35,470	0/0:4,0:3:8.83:0,9,78	0/0:11,0:1:3.01:0,3,37	0/0:16,0:3:9:0,9,97	0/0:20,0:19:21.11:0,21,254	0/1:12,3:12:18.20:92,0,18	0/1:6,3:9:51.61:188,0,52	0/0:36,0:34:97.51:0,98,1231	0/0:24,0:23:63.20:0,63,972	0/0:26,0:22:40.10:0,40,650	0/0:18,0:18:6.50:0,6,277	0/0:10,0:10:24.08:0,24,306	0/0:12,0:10:14.89:0,15,173	0/0:21,0:21:4.83:0,5,269	0/0:13,0:10:7.58:0,8,37	0/0:11,0:11:17.41:0,17,114	0/0:35,0:34:81.92:0,82,1524	0/1:13,0:13:6.11:6,0,349	0/0:13,0:13:39.13:0,39,621	0/0:25,0:24:44.32:0,44,629	0/0:23,0:19:36.41:0,36,459	0/0:9,0:8:13.07:0,13,209	0/0:12,0:12:15.40:0,15,185	0/0:19,0:18:15.02:0,15,162	0/0:24,0:24:48.03:0,48,797	0/0:27,0:27:75.10:0,75,1145	0/0:27,0:26:69.23:0,69,1153	0/0:15,0:15:32.33:0,32,506
chr10	51137874	.	AG	A	1163.80	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=4.451;DP=565;FS=0.657;HRun=2;HaplotypeScore=65.4115;InbreedingCoeff=0.8437;MQ=77.97;MQ0=0;MQRankSum=-1.172;QD=24.25;ReadPosRankSum=0.184;VQSLOD=3.2413;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:25:72.24:0,72,1065	0/0:10,0:10:30.10:0,30,448	0/0:20,0:20:44.55:0,45,507	0/1:7,0:7:2.42:2,0,86	0/0:33,0:33:96.31:0,96,1417	1/1:1,21:22:57.19:740,57,0	1/1:0,19:19:42.14:545,42,0	0/0:39,0:39:99:0,117,1644	0/0:23,0:23:66.22:0,66,987	0/0:25,0:25:72.23:0,72,1044	0/0:20,0:20:60.20:0,60,899	0/0:12,0:12:36.12:0,36,537	0/0:19,0:19:54.15:0,54,762	0/0:19,0:19:54.12:0,54,762	0/0:33,0:33:94.50:0,95,1346	0/0:10,0:10:30.09:0,30,431	0/0:16,0:16:45.14:0,45,655	0/0:11,0:11:33.11:0,33,486	0/0:21,0:21:57.19:0,57,853	0/0:21,0:21:63.21:0,63,941	0/0:19,0:19:54.18:0,54,808	0/0:5,0:5:15.05:0,15,225	0/0:20,0:20:57.04:0,57,803	0/0:27,0:27:72.16:0,72,1029	0/0:22,0:22:66.22:0,66,981	0/0:18,0:18:54.18:0,54,807	0/0:29,0:29:84.23:0,84,1212	0/0:19,0:19:54.18:0,54,804
chr10	51139595	.	C	CA	1889.05	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-0.767;DP=535;FS=0.573;HRun=2;HaplotypeScore=50.7760;InbreedingCoeff=0.9885;MQ=82.71;MQ0=0;MQRankSum=-5.281;QD=37.04;ReadPosRankSum=0.558;VQSLOD=3.9492;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:63.20:0,63,781	1/1:0,4:4:12.04:172,12,0	0/0:16,0:16:48.12:0,48,566	0/0:15,0:15:41.88:0,42,463	0/0:29,0:29:87.27:0,87,1077	0/0:14,0:14:42.13:0,42,520	0/0:17,0:17:48.15:0,48,594	0/0:34,0:34:93.28:0,93,1141	0/0:16,0:16:48.15:0,48,583	0/0:18,0:18:45.14:0,45,557	0/0:23,0:23:69.20:0,69,843	0/0:17,0:17:48.15:0,48,595	0/0:30,0:30:90.28:0,90,1114	0/0:16,0:16:48.15:0,48,594	1/1:0,24:24:63.21:906,63,0	1/1:0,23:23:66.22:950,66,0	0/0:22,0:22:66.21:0,66,817	0/0:13,0:13:30.09:0,30,372	0/0:16,0:16:48.15:0,48,595	0/0:18,0:18:51.16:0,51,632	0/0:16,0:16:45.10:0,45,529	0/0:11,0:11:33.10:0,33,409	0/0:12,0:12:33.10:0,33,409	0/0:17,0:17:48.15:0,48,594	0/0:16,0:16:45.12:0,45,544	0/0:18,0:18:54.16:0,54,660	0/0:36,0:36:99:0,105,1284	0/0:22,0:22:66.14:0,66,774
chr10	51139745	.	CACAT	C	407.63	PASS	AB=0.948;AC=12;AF=0.214;AN=56;BaseQRankSum=5.341;DP=435;FS=8.074;HRun=0;HaplotypeScore=89.6421;InbreedingCoeff=0.0350;MQ=73.18;MQ0=11;MQRankSum=1.239;QD=2.85;ReadPosRankSum=-3.899;VQSLOD=-0.3743;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:11:17.33:0,17,126	1/1:4,0:4:3.01:43,3,0	0/0:39,0:23:42.43:0,42,462	0/0:37,0:19:28.09:0,28,342	0/0:18,0:18:47.61:0,48,492	0/0:24,0:24:30.62:0,31,307	0/0:12,0:11:1.99:0,2,84	0/0:19,0:19:46.02:0,46,375	0/1:8,0:7:4.24:4,0,214	0/0:17,0:17:41.46:0,41,607	0/0:8,0:8:17.89:0,18,236	0/0:3,0:3:8.98:0,9,72	0/0:12,0:11:27.53:0,28,190	0/0:21,0:19:41.94:0,42,557	1/1:10,0:10:5.31:68,5,0	0/0:15,0:15:5.18:0,5,16	0/0:26,0:26:36.67:0,37,669	0/0:11,0:11:28.29:0,28,192	0/1:13,8:21:99:118,0,236	0/1:21,0:21:13.53:14,0,225	0/1:20,0:20:30.47:30,0,204	0/0:8,0:8:14.94:0,15,117	0/1:6,0:5:9.99:10,0,18	0/0:4,0:4:5.95:0,6,43	0/1:14,0:14:38.84:39,0,410	0/0:6,0:6:18:0,18,201	0/1:21,0:21:99:203,0,109	0/1:15,0:18:23.23:23,0,354
chr10	51139749	.	TACAC	T	850.28	PASS	AB=0.917;AC=11;AF=0.306;AN=36;BaseQRankSum=1.917;DP=438;FS=0.832;HRun=0;HaplotypeScore=89.3235;InbreedingCoeff=0.5051;MQ=68.72;MQ0=12;MQRankSum=2.845;QD=6.91;ReadPosRankSum=-0.471;VQSLOD=2.2332;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	1/1:4,0:4:3:25,3,0	./.	./.	0/0:22,0:22:17.13:0,17,324	0/1:16,0:24:16.38:22,0,16	./.	0/0:18,0:18:0:0,0,0	0/1:10,0:9:1.57:2,0,111	0/0:16,0:16:24.05:0,24,389	0/0:9,0:9:14.68:0,15,216	./.	./.	0/0:22,0:19:21.07:0,21,397	0/0:9,0:9:2.98:0,3,22	0/0:14,0:14:11.88:0,12,85	0/0:19,0:26:29.54:0,30,457	./.	1/1:20,0:20:24.08:332,24,0	1/1:13,8:21:7.38:95,7,0	0/1:22,0:22:25.19:193,0,25	./.	./.	./.	0/0:14,0:14:17.49:0,17,331	0/0:9,0:9:15.26:0,15,181	1/1:16,4:22:28.88:314,29,0	0/0:17,0:18:33.09:0,33,398
chr10	51139760	.	A	ATG	223.93	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=4.640;DP=429;FS=1.394;HRun=0;HaplotypeScore=78.6372;InbreedingCoeff=0.6920;MQ=51.39;MQ0=19;MQRankSum=-2.845;QD=8.61;ReadPosRankSum=1.608;VQSLOD=2.8231;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:7:6.02:0,6,90	1/1:1,4:5:3.01:57,3,0	0/0:25,0:10:29.13:0,29,410	0/0:29,0:11:20.84:0,21,400	0/0:23,0:22:42.03:0,42,606	0/0:19,0:19:27.06:0,27,383	0/0:14,0:13:14.88:0,15,231	0/0:24,0:24:63.26:0,63,859	0/0:11,0:10:20.56:0,21,273	0/0:17,0:16:44.94:0,45,651	0/0:11,0:11:21.07:0,21,327	0/0:3,0:2:6.02:0,6,91	0/0:10,0:9:21.07:0,21,310	0/0:22,0:19:36.59:0,37,565	1/1:0,7:7:3.01:59,3,0	1/1:1,13:14:12.04:223,12,0	0/0:29,0:29:71.03:0,71,1017	0/0:10,0:9:21.07:0,21,288	0/0:17,0:16:48.09:0,48,571	0/0:24,0:24:48.36:0,48,649	0/0:24,0:23:51.12:0,51,655	0/0:7,0:7:9.03:0,9,138	0/0:7,0:6:6.02:0,6,90	0/0:4,0:4:6.02:0,6,90	0/0:14,0:14:29.97:0,30,441	0/0:15,0:14:42.12:0,42,586	0/0:19,0:19:49.01:0,49,580	0/0:17,0:17:42.15:0,42,485
chr10	51140218	.	ATTGT	A	3820.60	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=13.666;DP=749;FS=0.966;HRun=0;HaplotypeScore=151.0650;InbreedingCoeff=1.0000;MQ=78.15;MQ0=0;MQRankSum=-13.472;QD=53.06;ReadPosRankSum=0.924;VQSLOD=4.4313;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:90.30:0,90,2300	1/1:0,17:17:51.17:932,51,0	0/0:15,0:15:42.13:0,42,961	0/0:21,0:21:54.18:0,54,1320	0/0:40,0:40:99:0,111,2867	0/0:31,0:31:90.31:0,90,2389	0/0:13,0:13:39.13:0,39,1027	0/0:36,0:36:99:0,105,2726	0/0:28,0:28:81.28:0,81,2161	0/0:40,0:40:99:0,114,3010	0/0:32,0:32:87.28:0,87,2201	0/0:32,0:32:90.31:0,90,2385	0/0:43,0:43:99:0,126,3225	0/0:23,0:23:69.24:0,69,1829	1/1:2,25:27:75.26:1380,75,0	1/1:1,27:28:81.28:1508,81,0	0/0:24,0:24:72.23:0,72,1758	0/0:16,0:16:48.13:0,48,1198	0/0:26,0:26:75.25:0,75,1938	0/0:32,0:32:93.28:0,93,2346	0/0:19,0:19:57.18:0,57,1465	0/0:18,0:18:54.19:0,54,1436	0/0:27,0:27:81.26:0,81,2085	0/0:20,0:20:54.19:0,54,1432	0/0:32,0:32:93.32:0,93,2435	0/0:37,0:37:99:0,105,2799	0/0:22,0:22:60.21:0,60,1589	0/0:18,0:18:51.18:0,51,1360
chr10	51140255	.	T	TTGAA	5498.77	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=5.319;DP=708;FS=1.512;HRun=0;HaplotypeScore=139.4585;InbreedingCoeff=0.9992;MQ=80.53;MQ0=1;MQRankSum=-10.721;QD=65.46;ReadPosRankSum=0.763;VQSLOD=6.7486;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:60.21:0,60,1104	1/1:3,16:19:48.16:1264,48,0	0/0:19,0:19:45.15:0,45,819	0/0:19,0:19:48.16:0,48,815	0/0:30,0:30:87.27:0,87,1536	0/0:33,0:33:93.31:0,93,1669	0/0:12,0:12:33.11:0,33,607	0/0:31,0:31:78.25:0,78,1353	0/0:26,0:26:78.23:0,78,1340	0/0:37,0:37:99:0,108,1959	0/0:21,0:21:57.20:0,57,1036	0/0:31,0:31:84.27:0,84,1515	0/0:35,0:35:99:0,105,1885	0/0:22,0:22:63.21:0,63,1127	1/1:3,33:36:96.33:2505,96,0	1/1:5,22:28:66.23:1729,66,0	0/0:24,0:24:69.23:0,69,1226	0/0:17,0:17:42.14:0,42,737	0/0:22,0:22:63.22:0,63,1160	0/0:31,0:31:93.32:0,93,1712	0/0:20,0:20:57.20:0,57,1042	0/0:24,0:24:66.23:0,66,1210	0/0:35,0:35:99:0,105,1830	0/0:16,0:16:48.16:0,48,849	0/0:29,0:29:87.28:0,87,1548	0/0:32,0:32:93.32:0,93,1698	0/0:22,0:22:60.19:0,60,1066	0/0:16,0:16:24.08:0,24,442
chr10	51140812	.	ACTTC	A	2502.02	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=10.663;DP=717;FS=6.157;HRun=0;HaplotypeScore=117.1227;InbreedingCoeff=0.9943;MQ=85.74;MQ0=0;MQRankSum=-4.235;QD=36.79;ReadPosRankSum=3.082;VQSLOD=3.8303;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,120,3113	1/1:4,7:11:15.05:270,15,0	0/0:19,0:18:48.16:0,48,1190	0/0:27,0:27:62.68:0,63,1451	0/0:34,0:34:93.31:0,93,2335	0/0:19,0:19:51.18:0,51,1323	0/0:29,0:29:78.25:0,78,1958	0/0:27,0:27:66.22:0,66,1656	0/0:27,0:27:75.26:0,75,1945	0/0:35,0:35:99:0,105,2657	0/0:24,0:24:63.21:0,63,1584	0/0:22,0:22:66.23:0,66,1712	0/0:24,0:24:66.23:0,66,1704	0/0:17,0:17:45.14:0,45,1115	1/1:2,29:31:72.25:1294,72,0	1/1:2,24:26:60.21:1079,60,0	0/0:35,0:35:99:0,102,2609	0/0:15,0:15:42.11:0,42,1017	0/0:16,0:16:45.15:0,45,1168	0/0:28,0:28:78.27:0,78,2017	0/0:31,0:31:81.28:0,81,2073	0/0:21,0:21:63.22:0,63,1634	0/0:21,0:21:60.21:0,60,1539	0/0:34,0:34:96.31:0,96,2395	0/0:29,0:29:81.27:0,81,2016	0/0:23,0:23:63.22:0,63,1636	0/0:35,0:34:99:0,102,2584	0/0:14,0:14:39.13:0,39,982
chr10	51142202	.	T	TTA	531.75	PASS	AC=6;AF=0.111;AN=54;BaseQRankSum=5.443;DP=212;FS=1.109;HRun=0;HaplotypeScore=30.1927;InbreedingCoeff=0.6372;MQ=78.43;MQ0=1;MQRankSum=0.539;QD=44.31;ReadPosRankSum=2.094;VQSLOD=5.0351;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:27.09:0,27,386	1/1:0,4:4:12.04:220,12,0	0/0:6,0:5:12.03:0,12,138	0/0:21,0:13:14.36:0,14,179	0/0:6,0:6:12.04:0,12,172	0/0:8,0:8:24.07:0,24,326	0/0:2,0:2:6.02:0,6,86	0/0:41,0:41:99:0,120,1624	0/0:2,0:2:6.01:0,6,68	0/0:3,0:3:9.03:0,9,129	0/0:2,0:2:6.02:0,6,86	0/0:1,0:1:3.01:0,3,43	0/0:4,0:4:12.01:0,12,151	0/0:4,0:4:9.03:0,9,129	1/1:0,4:4:12.04:220,12,0	1/1:0,4:4:12.04:220,12,0	0/0:13,0:12:33.02:0,33,488	0/0:16,0:16:45.15:0,45,642	0/0:10,0:10:27.08:0,27,370	0/0:4,0:4:12.04:0,12,171	0/0:1,0:1:3.01:0,3,43	0/0:2,0:2:6.02:0,6,85	./.	0/0:1,0:1:3.01:0,3,43	0/0:13,0:13:39.11:0,39,537	0/0:8,0:8:24.07:0,24,326	0/0:5,0:5:15.05:0,15,214	0/0:18,0:18:54.18:0,54,774
chr10	51142709	.	A	AC	767.05	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-5.464;DP=384;FS=0.000;HRun=5;HaplotypeScore=35.6236;InbreedingCoeff=0.9841;MQ=84.22;MQ0=0;MQRankSum=-1.953;QD=30.68;ReadPosRankSum=0.531;VQSLOD=3.4243;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:48.12:0,48,516	1/1:0,6:6:18.06:237,18,0	0/0:18,0:18:42.06:0,42,432	0/0:11,0:11:30:0,30,317	0/0:24,0:24:66.13:0,66,697	0/0:20,0:20:57.14:0,57,612	0/0:12,0:12:30.06:0,30,314	0/0:28,0:28:78.19:0,78,833	0/0:8,0:8:21.05:0,21,226	0/0:15,0:15:39.09:0,39,414	0/0:13,0:13:27.05:0,27,283	0/0:14,0:14:42.11:0,42,451	0/0:16,0:16:45.11:0,45,484	0/0:14,0:14:36.09:0,36,387	1/1:0,11:11:30.10:395,30,0	1/1:0,8:8:21.07:276,21,0	0/0:21,0:21:63.16:0,63,676	0/0:6,0:6:18.05:0,18,193	0/0:18,0:18:54.14:0,54,579	0/0:12,0:12:33.08:0,33,355	0/0:12,0:12:33.08:0,33,355	0/0:10,0:10:30.08:0,30,322	0/0:10,0:10:30.08:0,30,322	0/0:13,0:13:39.10:0,39,419	0/0:14,0:14:42.11:0,42,451	0/0:13,0:13:39.10:0,39,419	0/0:15,0:15:39.10:0,39,419	0/0:5,0:5:15.04:0,15,161
chr10	51143619	.	TC	T	1976.17	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=12.079;DP=604;FS=9.263;HRun=1;HaplotypeScore=73.7449;InbreedingCoeff=0.9930;MQ=83.40;MQ0=1;MQRankSum=-1.724;QD=31.87;ReadPosRankSum=3.189;VQSLOD=2.6059;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,123,1863	1/1:0,10:10:27.08:335,27,0	0/0:21,0:21:54.64:0,55,804	0/0:18,0:18:51.06:0,51,755	0/0:21,0:21:57.15:0,57,838	0/0:17,0:17:51.17:0,51,811	0/0:23,0:23:69.24:0,69,1100	0/0:19,0:19:57.17:0,57,866	0/0:24,0:24:72.23:0,72,1127	0/0:17,0:17:51.17:0,51,808	0/0:5,0:5:15.05:0,15,240	0/0:26,0:26:78.24:0,78,1200	0/0:37,0:37:99:0,111,1745	0/0:40,0:40:99:0,117,1805	1/1:1,27:28:78.25:967,78,0	1/1:0,24:24:66.06:817,66,0	0/0:25,0:24:75.25:0,75,1186	0/0:24,0:24:69.17:0,69,1102	0/0:12,0:12:36.10:0,36,525	0/0:9,0:9:27.09:0,27,424	0/0:33,0:32:93.02:0,93,1459	0/0:11,0:11:33.06:0,33,456	0/0:9,0:9:27.07:0,27,407	0/0:47,0:47:99:0,138,2192	0/0:13,0:13:36.12:0,36,575	0/0:14,0:14:42.14:0,42,671	0/0:24,0:24:72.23:0,72,1123	0/0:12,0:12:36.12:0,36,574
chr10	51144159	.	GAA	G	3233.06	PASS	AB=0.777;AC=25;AF=0.446;AN=56;BaseQRankSum=8.815;DP=636;FS=34.637;HRun=14;HaplotypeScore=92.6671;InbreedingCoeff=0.6804;MQ=70.79;MQ0=3;MQRankSum=1.260;QD=9.74;ReadPosRankSum=5.973;VQSLOD=-0.1030;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,17:23:47.44:412,47,0	1/1:3,0:11:21.93:96,22,0	0/1:22,0:20:7.02:7,0,180	0/1:11,0:8:10.44:10,0,36	0/1:25,3:30:12.09:12,0,744	0/1:2,2:25:6.22:6,0,100	0/1:7,1:20:8.03:8,0,99	0/0:23,1:30:33.90:0,34,625	0/0:20,0:22:57.83:0,58,641	0/0:27,0:30:30.53:0,31,550	0/0:24,0:28:81.90:0,82,955	1/1:2,19:24:62.26:535,62,0	1/1:6,11:18:29.67:255,30,0	0/0:15,0:18:47.64:0,48,629	1/1:5,0:27:49.35:215,49,0	1/1:8,0:28:49.33:215,49,0	0/0:13,1:20:22.81:0,23,520	1/1:1,17:21:50.27:424,50,0	0/0:20,1:22:28.90:0,29,687	0/0:28,0:33:77.56:0,78,868	0/0:15,0:17:38.59:0,39,492	1/1:6,19:26:43.06:446,43,0	1/1:1,19:22:59.55:523,60,0	1/1:3,13:17:19.97:287,20,0	0/0:15,0:16:43.44:0,43,555	0/0:22,0:25:56.67:0,57,738	0/0:31,0:33:74.08:0,74,943	0/0:8,0:10:20.50:0,21,208
chr10	51145514	.	TAAAAC	T	1751.17	PASS	AB=0.595;AC=5;AF=0.089;AN=56;BaseQRankSum=9.267;DP=764;FS=1.395;HRun=0;HaplotypeScore=141.6636;InbreedingCoeff=0.7754;MQ=67.59;MQ0=1;MQRankSum=-9.525;QD=28.71;ReadPosRankSum=2.560;VQSLOD=3.4864;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:81.28:0,81,2236	1/1:2,8:10:18.06:335,18,0	0/0:32,0:20:35.95:0,36,803	0/0:31,0:25:29.11:0,29,463	0/0:33,0:33:81.28:0,81,2243	0/0:34,0:34:75.26:0,75,2034	0/0:21,0:21:54.18:0,54,1483	0/0:26,0:26:51.16:0,51,1222	0/0:25,0:25:69.24:0,69,1881	0/0:36,0:36:87.28:0,87,2427	0/0:25,0:25:60.21:0,60,1593	0/0:25,0:25:57.20:0,57,1591	0/0:26,0:26:54.18:0,54,1454	0/0:32,0:32:66.23:0,66,1861	1/1:10,19:29:54.18:1013,54,0	0/1:7,15:22:53.44:532,0,53	0/0:24,0:24:48.64:0,49,1326	0/0:17,0:17:48.15:0,48,1213	0/0:30,0:30:66.22:0,66,1678	0/0:35,0:35:84.29:0,84,2312	0/0:24,0:24:51.18:0,51,1441	0/0:23,0:23:54.19:0,54,1443	0/0:33,0:33:72.25:0,72,1921	0/0:45,0:45:99:0,105,2968	0/0:30,0:30:72.25:0,72,1948	0/0:26,0:26:63.20:0,63,1721	0/0:23,0:23:48.16:0,48,1315	0/0:11,0:11:24.08:0,24,676
chr10	51146500	.	GT	G	5902.28	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=12.435;DP=667;FS=2.451;HRun=2;HaplotypeScore=66.6222;InbreedingCoeff=0.9994;MQ=80.08;MQ0=0;MQRankSum=-2.047;QD=37.36;ReadPosRankSum=3.907;VQSLOD=5.5487;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,19:19:51.17:712,51,0	0/0:14,0:14:42.13:0,42,635	0/0:20,0:20:60.18:0,60,847	0/0:28,0:28:83.63:0,84,1130	0/0:34,0:34:99:0,102,1590	0/0:23,0:23:69.23:0,69,1075	0/0:20,0:20:60.20:0,60,938	0/0:44,0:44:99:0,129,1901	0/0:26,0:26:78.25:0,78,1196	0/0:33,0:33:99:0,99,1516	0/0:21,0:21:63.15:0,63,891	1/1:0,29:29:75.25:1045,75,0	1/1:1,19:20:57.19:791,57,0	0/0:15,0:15:45.13:0,45,675	0/0:24,0:24:72.21:0,72,1079	0/0:20,0:20:60.19:0,60,917	0/0:21,0:21:63.21:0,63,985	1/1:0,12:12:27.09:377,27,0	0/0:32,0:32:96.27:0,96,1395	0/0:26,0:26:75.23:0,75,1128	0/0:26,0:26:75.26:0,75,1165	1/1:0,31:31:90.30:1257,90,0	1/1:0,21:21:56.98:797,57,0	1/1:1,25:26:66.22:923,66,0	0/0:23,0:23:69.19:0,69,1012	0/0:29,0:29:84.28:0,84,1293	0/0:22,0:22:66.19:0,66,982	0/0:8,0:8:24.08:0,24,370
chr10	51146621	.	TCTCTCTCTCTCTCTCTCTCTCTCTCTC	T	521.94	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=0.305;DP=638;FS=1.136;HRun=0;HaplotypeScore=319.9413;InbreedingCoeff=0.8498;MQ=67.31;MQ0=31;MQRankSum=-4.145;QD=11.60;ReadPosRankSum=-1.501;VQSLOD=1.7397;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:19:38.31:0,38,751	1/1:2,0:12:2.26:123,2,0	0/0:44,0:25:40.12:0,40,715	0/0:44,0:14:42.13:0,42,495	0/0:26,0:26:50.01:0,50,604	0/0:22,0:22:42.13:0,42,499	0/0:18,0:17:41.96:0,42,718	0/0:54,0:54:99:0,143,2279	0/0:11,0:10:24.07:0,24,297	0/0:25,0:23:62.65:0,63,1122	0/0:20,0:18:22.76:0,23,306	0/0:26,0:26:57.45:0,57,1247	0/0:15,0:14:38.41:0,38,579	0/0:13,0:13:29.41:0,29,378	1/1:1,0:11:27.85:295,28,0	1/1:2,16:17:3.01:223,3,0	0/0:24,0:21:61.79:0,62,716	0/0:12,0:12:36.11:0,36,576	0/0:29,0:29:75.80:0,76,868	0/0:20,0:20:34.16:0,34,384	0/0:32,0:30:46.78:0,47,1415	0/0:18,0:17:38.31:0,38,519	0/0:19,0:19:47.97:0,48,558	0/0:21,0:21:54:0,54,979	0/0:23,0:23:45.14:0,45,1166	0/0:22,0:21:59.62:0,60,1037	0/0:14,0:13:27.07:0,27,441	0/0:20,0:19:48.16:0,48,1385
chr10	51148299	.	ATGT	A	6820.49	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=12.964;DP=566;FS=26.243;HRun=0;HaplotypeScore=84.9838;InbreedingCoeff=0.9973;MQ=94.32;MQ0=0;MQRankSum=-2.591;QD=38.10;ReadPosRankSum=2.926;VQSLOD=3.4209;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,33:34:90.18:1383,90,0	0/0:14,0:14:42.13:0,42,890	0/0:34,0:34:82.21:0,82,1756	0/0:19,0:19:51.17:0,51,1070	0/0:18,0:18:51.14:0,51,1045	1/1:2,17:19:51.10:766,51,0	1/1:2,15:17:36.12:588,36,0	0/0:27,0:27:69.24:0,69,1509	0/0:16,0:16:45.15:0,45,997	0/0:15,0:15:42.13:0,42,891	0/0:13,0:13:36.12:0,36,798	1/1:2,11:13:33.10:516,33,0	1/1:2,17:19:44.84:706,45,0	0/0:20,0:20:60.21:0,60,1323	0/0:18,0:18:48.15:0,48,1011	0/0:29,0:29:87.26:0,87,1834	0/0:28,0:28:75.24:0,75,1619	1/1:2,17:19:48.16:774,48,0	0/0:11,0:11:29.76:0,30,568	0/0:16,0:16:48.16:0,48,1036	0/0:32,0:32:87.28:0,87,1885	1/1:1,16:18:47.98:686,48,0	1/1:1,16:17:42.10:647,42,0	1/1:1,22:23:48.12:755,48,0	0/0:20,0:20:60.21:0,60,1317	0/0:27,0:27:75.26:0,75,1662	0/0:25,0:25:69.24:0,69,1518	0/0:5,0:5:15.03:0,15,290
chr10	51148459	.	TG	T	1260.75	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.979;DP=570;FS=2.211;HRun=1;HaplotypeScore=55.0907;InbreedingCoeff=0.9625;MQ=95.85;MQ0=0;MQRankSum=-2.961;QD=35.02;ReadPosRankSum=1.197;VQSLOD=3.5287;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:81.15:0,81,1115	0/0:9,0:9:27.09:0,27,395	0/0:25,0:25:75.13:0,75,1022	0/0:28,0:28:74.04:0,74,1000	0/0:29,0:29:87.25:0,87,1214	1/1:0,22:22:63.21:880,63,0	1/1:0,14:14:36.12:503,36,0	0/0:39,0:39:99:0,114,1546	0/0:21,0:21:63.20:0,63,902	0/0:17,0:17:51.16:0,51,729	0/0:20,0:20:60.17:0,60,837	0/0:17,0:17:51.17:0,51,746	0/0:19,0:19:57.19:0,57,828	0/0:13,0:13:39.13:0,39,568	0/0:17,0:17:51.17:0,51,746	0/0:17,0:17:51.09:0,51,701	0/0:5,0:5:15.05:0,15,219	0/0:27,0:27:78.24:0,78,1110	0/0:24,0:24:70.08:0,70,926	0/0:30,0:30:90.25:0,90,1239	0/0:16,0:16:48.13:0,48,662	0/0:23,0:23:69.21:0,69,969	0/0:26,0:26:78.18:0,78,1055	0/0:18,0:18:54.14:0,54,749	0/0:28,0:28:84.24:0,84,1172	0/0:16,0:16:48.15:0,48,683	0/0:20,0:20:60.19:0,60,857	0/0:3,0:3:9.03:0,9,132
chr10	51148584	.	A	AC	1399.54	PASS	AB=0.985;AC=19;AF=0.339;AN=56;BaseQRankSum=1.424;DP=448;FS=9.281;HRun=9;HaplotypeScore=49.0926;InbreedingCoeff=0.6288;MQ=74.26;MQ0=3;MQRankSum=-0.454;QD=7.95;ReadPosRankSum=0.553;VQSLOD=0.5474;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,16:20:5.06:210,5,0	0/1:9,0:9:2.17:26,0,2	0/1:22,2:16:45.26:58,0,45	0/1:18,0:14:6.23:6,0,36	0/0:17,0:17:50.82:0,51,427	0/0:21,0:21:52.50:0,52,438	0/0:14,0:14:38.94:0,39,330	0/0:24,0:24:47.86:0,48,399	0/0:18,0:18:38.93:0,39,328	0/0:15,0:15:7.27:0,7,235	0/0:16,0:16:44.81:0,45,371	1/1:3,7:10:14.99:151,15,0	1/1:3,13:16:17.12:256,17,0	0/0:16,0:17:47.02:0,47,396	0/1:16,0:16:5.30:34,0,5	0/1:17,0:17:11.21:37,0,11	0/0:16,0:16:44.96:0,45,382	1/1:3,12:15:30.03:317,30,0	0/0:16,0:16:22.36:0,22,327	0/0:16,0:16:41.80:0,42,342	0/0:12,0:12:26.96:0,27,227	1/1:5,6:11:12.03:133,12,0	1/1:2,8:10:15.04:166,15,0	1/1:0,10:10:18.05:199,18,0	0/0:17,0:17:44.96:0,45,385	0/0:18,0:18:50.96:0,51,436	0/0:22,0:22:56.95:0,57,488	0/0:13,0:13:35.91:0,36,300
chr10	51148592	.	C	CA	739.97	PASS	AB=0.885;AC=12;AF=0.214;AN=56;BaseQRankSum=10.603;DP=471;FS=4.518;HRun=0;HaplotypeScore=57.0782;InbreedingCoeff=0.2361;MQ=72.20;MQ0=3;MQRankSum=-0.133;QD=5.00;ReadPosRankSum=3.845;VQSLOD=2.7435;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:23:16.61:17,0,78	1/1:2,7:9:14.45:191,14,0	0/0:28,0:18:8.13:0,8,261	0/0:21,0:16:29.64:0,30,215	0/0:21,0:21:56.21:0,56,737	0/0:20,0:20:60.17:0,60,790	0/0:15,0:15:45.12:0,45,591	0/0:27,0:27:75.12:0,75,894	0/0:14,0:14:42.13:0,42,567	0/0:14,0:14:31.29:0,31,471	0/0:18,0:18:51.15:0,51,671	0/1:11,0:11:13.01:13,0,30	0/1:17,0:17:19.63:32,0,20	0/0:18,0:18:54.02:0,54,692	0/1:2,17:19:1.81:229,0,2	0/1:3,13:17:19.97:294,0,20	0/0:16,0:16:48.15:0,48,650	0/1:15,0:15:4.75:34,0,5	0/0:18,0:18:52.70:0,53,659	0/0:15,0:15:45.13:0,45,588	0/0:9,0:9:27.09:0,27,370	0/1:11,0:11:17.73:18,0,56	0/1:14,0:14:33.43:35,0,33	1/1:12,0:12:12.22:37,12,0	0/0:18,0:18:54.15:0,54,703	0/0:17,0:17:51.17:0,51,709	0/0:22,0:22:66.18:0,66,868	0/0:12,0:12:36.12:0,36,498
chr10	51150376	.	AAG	A	262.14	PASS	AB=0.938;AC=15;AF=0.288;AN=52;BaseQRankSum=2.962;DP=576;FS=0.000;HRun=0;HaplotypeScore=96.5104;InbreedingCoeff=0.1144;MQ=67.69;MQ0=12;MQRankSum=1.211;QD=1.14;ReadPosRankSum=0.312;VQSLOD=1.0265;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:17:14.59:0,15,105	./.	./.	0/0:35,0:21:0:0,0,0	0/0:30,0:29:30.11:0,30,659	1/1:16,0:16:12.04:87,12,0	1/1:13,0:12:2.75:38,3,0	0/0:34,0:32:6.64:0,7,37	0/1:19,5:24:53.01:53,0,319	0/0:26,0:26:30.02:0,30,384	0/1:9,1:10:20.70:21,0,122	0/1:15,0:15:0.56:1,0,19	0/0:19,0:18:16.33:0,16,57	0/1:15,0:15:24.66:25,0,153	0/0:13,0:13:4.48:0,4,38	0/0:28,0:28:37.47:0,37,283	0/1:15,4:20:27.98:28,0,244	0/0:21,0:18:6.85:0,7,72	0/0:12,0:12:5.51:0,6,48	1/1:18,4:21:14.68:130,15,0	0/1:15,0:14:3.42:3,0,55	0/1:22,0:22:0.25:0,0,42	0/0:15,0:15:10.61:0,11,54	0/0:18,0:17:4.96:0,5,18	0/1:17,3:20:11.65:12,0,236	0/1:38,0:38:10.34:10,0,484	0/0:28,0:28:16.48:0,16,135	0/0:15,0:14:25.47:0,25,243
chr10	51150416	.	GAGA	G	1243.25	PASS	AB=0.990;AC=20;AF=0.357;AN=56;BaseQRankSum=9.494;DP=699;FS=1.699;HRun=0;HaplotypeScore=126.9030;InbreedingCoeff=0.6117;MQ=47.27;MQ0=33;MQRankSum=-5.005;QD=5.41;ReadPosRankSum=-1.649;VQSLOD=2.5326;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:19,0:16:22.71:29,0,23	1/1:6,0:5:3.01:38,3,0	0/0:66,0:11:20.96:0,21,214	0/0:79,0:16:26.55:0,27,382	0/0:32,0:31:84.65:0,85,1379	1/1:21,0:18:22.87:214,23,0	1/1:18,0:16:1.42:47,1,0	0/0:31,0:30:68.04:0,68,1002	0/0:26,0:26:59.57:0,60,890	0/0:26,0:25:57.05:0,57,900	0/0:13,0:13:26.82:0,27,404	1/1:17,1:17:4.30:118,4,0	1/1:20,1:20:18.53:301,19,0	0/0:22,0:21:47.73:0,48,684	0/1:24,1:25:2.08:103,0,2	0/1:26,0:26:88.14:114,0,88	0/0:24,0:24:24.39:0,24,670	1/1:20,1:17:12.63:303,13,0	0/0:16,0:16:32.84:0,33,568	0/0:19,0:18:49.83:0,50,554	0/0:14,0:14:25.18:0,25,286	1/1:18,2:20:6.39:133,6,0	1/1:18,0:17:1.29:13,1,0	0/1:16,0:13:1.19:14,0,1	0/0:24,0:24:62.94:0,63,954	0/0:32,0:32:83.69:0,84,1157	0/0:31,0:29:40.51:0,41,739	0/0:13,0:13:26.92:0,27,424
chr10	51150418	.	GA	G	2452.77	PASS	AB=0.679;AC=23;AF=0.411;AN=56;BaseQRankSum=10.250;DP=697;FS=7.140;HRun=2;HaplotypeScore=105.6091;InbreedingCoeff=0.8383;MQ=47.13;MQ0=34;MQRankSum=-2.067;QD=10.81;ReadPosRankSum=-0.221;VQSLOD=1.3466;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:16,4:16:14.01:133,14,0	1/1:2,3:4:3.01:38,3,0	0/0:68,0:12:24.14:0,24,267	0/0:83,0:16:32.30:0,32,412	0/0:32,0:31:87.67:0,88,1185	1/1:9,12:18:16.97:170,17,0	0/1:10,9:17:27.10:39,0,27	0/0:31,0:30:84.20:0,84,1078	0/0:27,0:27:68.04:0,68,832	0/0:25,0:24:57.15:0,57,786	0/0:12,0:12:26.58:0,27,343	1/1:6,12:17:20.61:238,21,0	1/1:7,14:20:45.10:534,45,0	0/0:20,0:19:47.28:0,47,608	1/1:3,22:25:23.92:257,24,0	1/1:14,11:25:35.99:293,36,0	0/0:24,0:24:55.06:0,55,668	1/1:5,16:18:48.03:553,48,0	0/0:17,0:17:8.17:0,8,512	0/0:19,0:18:52.44:0,52,565	0/0:14,0:14:25.25:0,25,285	1/1:3,17:20:20.93:224,21,0	1/1:2,14:15:8.81:111,9,0	1/1:9,7:13:5.57:77,6,0	0/0:23,0:23:62.69:0,63,833	0/0:31,0:31:88.86:0,89,1065	0/0:32,0:30:3.79:0,4,633	0/0:12,0:12:27.04:0,27,376
chr10	51150419	.	A	AG	2167.81	PASS	AB=0.894;AC=23;AF=0.411;AN=56;BaseQRankSum=9.172;DP=689;FS=1.961;HRun=1;HaplotypeScore=108.9600;InbreedingCoeff=0.6898;MQ=47.22;MQ0=34;MQRankSum=-0.435;QD=8.53;ReadPosRankSum=-1.167;VQSLOD=0.6835;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,7:16:13.29:217,13,0	1/1:4,0:3:3.01:38,3,0	0/0:68,0:12:21.97:0,22,285	0/0:85,0:18:43.95:0,44,474	0/0:31,0:30:87.20:0,87,1154	0/1:20,1:18:17.16:149,0,17	0/1:18,0:17:36.70:37,0,61	0/0:32,0:30:84.21:0,84,1105	0/0:27,0:27:68.11:0,68,844	0/0:23,0:22:57.19:0,57,768	0/0:11,0:11:27.07:0,27,349	1/1:15,1:15:17.63:151,18,0	1/1:21,0:20:42.18:363,42,0	0/0:20,0:19:47.71:0,48,606	1/1:25,0:25:15.08:95,15,0	1/1:11,13:24:47.29:631,47,0	0/0:24,0:24:57.04:0,57,703	1/1:22,1:19:46.94:381,47,0	0/0:17,0:17:9.09:0,9,526	0/0:19,0:18:54.08:0,54,639	0/0:12,0:13:18.23:0,18,245	1/1:19,1:20:18.82:198,19,0	1/1:14,1:14:7.21:33,7,0	1/1:15,0:13:1.10:39,1,0	0/0:23,0:23:63.19:0,63,833	0/0:31,0:31:90.05:0,90,1086	0/1:20,12:30:41.80:42,0,582	0/0:10,0:10:26.99:0,27,366
chr10	51150435	.	AAAGAG	A	3734.06	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=12.263;DP=691;FS=19.612;HRun=0;HaplotypeScore=134.8406;InbreedingCoeff=0.9814;MQ=53.19;MQ0=25;MQRankSum=-10.115;QD=18.86;ReadPosRankSum=-5.944;VQSLOD=0.7983;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:16,3:18:38.15:316,38,0	1/1:0,0:3:8.95:77,9,0	0/0:77,0:20:34.37:0,34,277	0/0:101,0:28:27.76:0,28,335	0/0:24,0:24:57.02:0,57,1189	1/1:13,10:20:49.90:531,50,0	1/1:10,7:16:35.68:322,36,0	0/0:41,0:39:84.05:0,84,1212	0/0:25,0:25:54.11:0,54,1260	0/0:26,0:26:63.18:0,63,1235	0/0:12,0:12:30.01:0,30,576	1/1:13,6:18:38.70:394,39,0	1/1:13,5:17:38.94:476,39,0	0/0:20,0:20:50.92:0,51,1126	1/1:5,0:20:50.60:379,51,0	1/1:9,0:17:32.88:295,33,0	0/0:21,0:21:44.68:0,45,840	1/1:17,1:16:23.92:275,24,0	0/0:17,0:17:35.94:0,36,770	0/0:19,0:19:51.12:0,51,1183	0/0:13,0:13:29.98:0,30,547	1/1:12,7:19:47.70:429,48,0	1/1:7,4:10:20.88:185,21,0	1/1:12,2:11:8.57:55,9,0	0/0:29,0:29:69.07:0,69,1420	0/0:28,0:28:69.17:0,69,1443	0/0:27,0:25:69.14:0,69,1572	0/0:12,0:12:27.07:0,27,538
chr10	51153642	.	A	AT	6224.47	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-13.247;DP=582;FS=7.165;HRun=8;HaplotypeScore=51.0988;InbreedingCoeff=0.9864;MQ=71.01;MQ0=0;MQRankSum=0.830;QD=29.09;ReadPosRankSum=1.675;VQSLOD=5.2078;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,16:18:46.31:506,46,0	1/1:1,11:12:33.10:381,33,0	0/0:13,0:13:22.18:0,22,199	0/0:7,0:7:12:0,12,110	0/0:37,0:37:87.03:0,87,796	1/1:3,19:22:54.16:623,54,0	1/1:0,18:18:51.15:589,51,0	0/0:38,0:38:92.02:0,92,831	0/0:19,0:19:54.02:0,54,491	0/0:36,0:36:96.04:0,96,878	0/0:24,0:24:69:0,69,623	1/1:2,18:20:48.14:554,48,0	1/1:2,16:18:48.14:553,48,0	0/0:17,0:17:44.99:0,45,400	1/1:3,20:23:54.16:623,54,0	1/1:1,14:15:36.11:415,36,0	0/0:23,0:23:63.03:0,63,577	1/1:2,24:26:72.21:830,72,0	0/0:22,0:22:54.01:0,54,489	0/0:31,0:32:83.04:0,83,738	0/0:13,0:13:21:0,21,192	1/1:2,20:22:32.71:630,33,0	1/1:1,4:5:9.03:104,9,0	1/1:2,13:15:36.11:415,36,0	0/0:18,0:18:48.02:0,48,436	0/0:30,0:30:84.02:0,84,761	0/0:25,0:25:75.02:0,75,678	0/0:14,0:14:42.02:0,42,384
chr10	51154068	.	CAG	C	59.78	PASS	AB=0.948;AC=7;AF=0.140;AN=50;BaseQRankSum=1.109;DP=392;FS=2.983;HRun=0;HaplotypeScore=63.6375;InbreedingCoeff=0.1945;MQ=62.67;MQ0=6;MQRankSum=0.619;QD=0.72;ReadPosRankSum=0.687;VQSLOD=1.5485;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:21:2.78:0,3,23	0/0:8,0:8:11.95:0,12,97	./.	./.	0/1:11,0:11:1.42:1,0,20	1/1:14,3:18:8.85:81,9,0	0/1:13,1:15:0.97:39,0,1	0/0:17,0:17:7.30:0,7,44	0/0:9,0:13:12:0,12,119	0/0:21,0:22:17.93:0,18,194	0/1:10,1:11:18.94:27,0,19	0/0:13,0:13:13.61:0,14,76	0/0:13,0:13:8.99:0,9,81	0/0:7,0:7:2.99:0,3,23	0/0:12,0:12:9.48:0,9,98	0/0:7,0:12:6:0,6,52	0/0:23,0:23:3.19:0,3,260	0/0:9,0:9:9.18:0,9,52	0/0:16,0:15:8.18:0,8,64	0/1:15,1:15:22.88:23,0,82	0/0:15,0:12:8.89:0,9,134	0/0:11,0:11:6.02:0,6,75	0/0:13,0:13:5.75:0,6,46	0/1:12,0:12:0.02:0,0,1	0/0:9,0:9:9.03:0,9,135	0/0:16,0:15:21.07:0,21,303	0/0:13,0:13:18.02:0,18,237	./.
chr10	51154107	.	A	AG	567.25	PASS	AB=0.624;AC=16;AF=0.286;AN=56;BaseQRankSum=3.641;DP=338;FS=1.912;HRun=1;HaplotypeScore=45.7856;InbreedingCoeff=0.3627;MQ=36.30;MQ0=52;MQRankSum=-2.209;QD=7.56;ReadPosRankSum=-1.062;VQSLOD=0.3933;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,9:12:1.15:45,1,0	0/1:2,4:5:2.81:110,0,3	0/0:50,0:9:25.89:0,26,296	0/0:69,0:10:14.77:0,15,190	0/0:11,0:9:9.03:0,9,120	0/0:8,0:7:11.87:0,12,93	0/0:6,0:6:0.73:0,1,39	0/0:16,0:14:0.08:0,0,345	0/0:5,0:5:3.01:0,3,42	0/0:8,0:8:15.02:0,15,204	0/0:5,0:5:8.98:0,9,102	1/1:2,5:8:14.07:174,14,0	0/1:4,3:7:39.84:66,0,40	1/1:3,1:4:3.01:48,3,0	0/1:2,6:8:29.90:46,0,30	1/1:5,0:5:6.01:55,6,0	0/0:13,1:14:28.86:0,29,369	0/1:2,3:5:31.16:83,0,31	0/0:7,0:7:21.06:0,21,263	0/0:9,0:7:17.20:0,17,165	0/0:15,0:8:12.04:0,12,166	0/0:0,1:1:0:0,0,0	1/1:0,7:7:5.31:90,5,0	1/1:5,1:5:0.25:0,0,0	0/0:5,0:4:9.03:0,9,126	0/0:12,1:12:33.07:0,33,425	0/0:10,0:10:27.07:0,27,343	0/0:10,0:4:6.02:0,6,80
chr10	51154147	.	GGGGGGAGAGAGAGAGA	G	219.03	PASS	AB=0.728;AC=7;AF=0.140;AN=50;BaseQRankSum=2.658;DP=281;FS=14.079;HRun=0;HaplotypeScore=66.1457;InbreedingCoeff=0.2465;MQ=31.98;MQ0=39;MQRankSum=-2.264;QD=6.84;ReadPosRankSum=-1.070;VQSLOD=0.0707;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,0:7:4.30:16,4,0	0/0:2,0:2:0:0,0,0	0/0:48,0:4:11.87:0,12,137	0/0:69,0:8:17.58:0,18,228	0/0:7,0:7:7.98:0,8,109	0/0:5,0:9:9.87:0,10,87	0/0:8,0:7:11.40:0,11,84	0/0:14,0:11:29.47:0,29,500	0/0:6,0:3:9.03:0,9,372	0/0:6,0:6:8.61:0,9,326	0/0:2,0:2:3.01:0,3,54	0/1:3,6:7:60.79:234,0,61	0/1:2,5:6:33.89:34,0,116	0/0:7,0:6:10.83:0,11,96	./.	0/1:4,0:3:30.56:31,0,74	0/0:11,0:10:24.05:0,24,988	./.	0/0:6,0:5:8.86:0,9,116	0/0:3,0:3:6.02:0,6,110	0/0:11,0:8:11.75:0,12,269	0/0:1,0:1:1.82:0,2,5	1/1:4,0:4:2.97:21,3,0	./.	0/0:6,0:6:8.65:0,9,199	0/0:10,0:8:14.70:0,15,284	0/0:12,0:12:20.48:0,20,838	0/0:8,0:6:18.06:0,18,823
chr10	51154167	.	A	AAGAGGGG	176.01	PASS	AB=1.000;AC=4;AF=0.071;AN=56;BaseQRankSum=5.232;DP=415;FS=2.690;HRun=0;HaplotypeScore=86.1518;InbreedingCoeff=0.3809;MQ=43.99;MQ0=40;MQRankSum=-4.342;QD=4.76;ReadPosRankSum=-2.742;VQSLOD=1.3535;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:10,4:16:13.85:184,14,0	0/0:7,0:7:13.35:0,13,264	0/0:37,0:5:12.04:0,12,190	0/0:54,0:2:3.01:0,3,36	0/0:13,0:13:24.07:0,24,574	0/0:19,0:18:19.84:0,20,425	0/0:9,0:8:9.03:0,9,218	0/0:18,0:16:45.12:0,45,919	0/0:13,0:10:24.08:0,24,573	0/0:10,0:10:24.08:0,24,616	0/0:11,0:11:24.04:0,24,421	0/1:11,0:11:84.75:85,0,150	0/0:10,0:10:14.24:0,14,187	0/0:8,0:7:14.94:0,15,269	0/0:8,0:8:18.03:0,18,266	0/0:10,0:10:22.32:0,22,495	0/0:21,0:20:47.99:0,48,1241	0/1:7,0:3:8.06:18,0,8	0/0:7,0:7:18.06:0,18,462	0/0:7,0:7:21.07:0,21,465	0/0:16,0:14:30.04:0,30,538	0/0:10,0:10:20.32:0,20,288	0/0:12,0:12:15.17:0,15,209	0/0:8,0:7:6.02:0,6,84	0/0:12,0:12:21.04:0,21,449	0/0:16,0:14:36.12:0,36,858	0/0:17,0:17:35.74:0,36,943	0/0:24,0:20:51.18:0,51,1209
chr10	51159845	.	A	AC	7272.08	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-11.095;DP=581;FS=3.364;HRun=6;HaplotypeScore=61.7265;InbreedingCoeff=0.9952;MQ=87.79;MQ0=0;MQRankSum=-2.353;QD=29.44;ReadPosRankSum=3.994;VQSLOD=5.5768;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,35:40:93.30:1167,93,0	1/1:0,5:5:12.04:151,12,0	0/0:27,0:27:51.95:0,52,509	0/0:20,0:20:37.89:0,38,356	0/0:25,0:25:65.28:0,65,626	1/1:1,28:29:60.19:755,60,0	1/1:4,23:27:56.76:716,57,0	0/0:28,0:28:78.14:0,78,777	0/0:16,0:16:39.07:0,39,391	0/0:21,0:21:63.06:0,63,608	0/0:13,0:13:32.09:0,32,356	1/1:0,18:18:48.15:603,48,0	1/1:3,17:20:48.15:604,48,0	0/0:18,0:18:54.08:0,54,531	1/1:0,26:26:66.21:828,66,0	1/1:0,18:18:54.17:679,54,0	0/0:18,0:17:51.05:0,51,496	1/1:0,17:17:42.13:528,42,0	0/0:25,0:25:66.07:0,66,648	0/0:26,0:26:75.13:0,75,745	0/0:19,0:19:48.09:0,48,485	1/1:0,19:19:50.99:600,51,0	1/1:2,14:16:24.08:301,24,0	1/1:1,11:12:27.09:340,27,0	0/0:15,0:15:42.07:0,42,419	0/0:18,0:18:42.66:0,43,436	0/0:27,0:27:69.14:0,69,700	0/0:18,0:18:54.12:0,54,548
chr10	51160238	.	CTGTGTG	C	740.16	PASS	AB=1.000;AC=16;AF=0.320;AN=50;BaseQRankSum=1.288;DP=580;FS=30.840;HRun=0;HaplotypeScore=123.0095;InbreedingCoeff=0.3786;MQ=45.87;MQ0=39;MQRankSum=2.053;QD=2.94;ReadPosRankSum=-1.800;VQSLOD=0.1768;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:31,0:28:8.60:116,9,0	0/0:7,0:7:3.01:0,3,57	./.	./.	0/0:26,0:26:22:0,22,421	0/1:23,0:22:7.10:7,0,11	1/1:24,0:19:14.32:214,14,0	0/0:22,0:22:5.91:0,6,77	0/1:16,0:16:45.82:51,0,46	0/0:23,0:22:15.05:0,15,277	0/0:18,0:17:12.04:0,12,275	0/1:11,0:11:0:0,0,0	1/1:29,1:31:11.30:210,11,0	0/0:30,0:26:12.04:0,12,254	0/0:22,0:21:4.14:0,4,116	0/1:36,0:35:2.34:2,0,270	0/0:24,0:21:3.16:0,3,243	0/1:18,0:15:11.52:69,0,12	1/1:10,0:9:3:26,3,0	0/0:23,0:23:17.59:0,18,369	0/0:32,0:25:16.63:0,17,540	./.	0/0:14,4:17:0:0,0,0	1/1:25,0:22:12.04:190,12,0	0/0:19,0:18:8.65:0,9,135	0/1:26,0:26:5.14:5,0,163	0/0:27,0:24:24.07:0,24,445	0/0:12,0:9:6.93:0,7,320
chr10	51161772	.	T	TTACATATACATA	1794.37	PASS	AB=1.000;AC=19;AF=0.352;AN=54;BaseQRankSum=5.039;DP=602;FS=16.125;HRun=0;HaplotypeScore=211.2528;InbreedingCoeff=0.6787;MQ=66.90;MQ0=2;MQRankSum=-4.531;QD=7.84;ReadPosRankSum=-2.202;VQSLOD=1.3038;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:27:10.72:217,11,0	0/1:13,0:13:0:0,0,0	0/0:19,0:16:11.66:0,12,206	0/0:17,0:15:11.72:0,12,218	0/0:31,0:31:54.18:0,54,1771	1/1:20,0:20:9.50:369,10,0	1/1:16,0:16:3.22:116,3,0	0/0:40,0:39:45.15:0,45,1358	0/0:15,0:15:27.09:0,27,945	0/0:22,0:22:36.12:0,36,1256	0/0:23,0:23:48.16:0,48,1537	1/1:34,0:34:2.72:38,3,0	1/1:31,0:31:18.05:491,18,0	0/0:24,0:24:57.20:0,57,1832	1/1:10,19:30:3.01:97,3,0	0/1:24,0:24:86.78:467,0,87	0/0:19,0:19:32.86:0,33,1088	1/1:5,0:5:3.01:74,3,0	0/0:16,0:15:9.03:0,9,283	0/0:20,0:20:39.13:0,39,1122	0/0:17,0:17:33.11:0,33,1143	./.	1/1:15,0:15:3.01:93,3,0	0/1:14,0:14:0:0,0,0	0/0:22,0:22:51.17:0,51,1616	0/0:30,0:29:63.21:0,63,2059	0/0:24,0:24:48.15:0,48,1541	0/0:20,0:20:39.13:0,39,1231
chr10	51161797	.	T	TAC	354.85	PASS	AB=0.732;AC=12;AF=0.222;AN=54;BaseQRankSum=3.497;DP=587;FS=2.432;HRun=0;HaplotypeScore=87.5478;InbreedingCoeff=0.5398;MQ=53.12;MQ0=14;MQRankSum=-1.303;QD=3.45;ReadPosRankSum=-2.995;VQSLOD=1.7087;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:15:6:73,6,0	0/1:2,5:8:0:0,0,0	0/0:26,0:8:14.41:0,14,184	0/0:28,0:10:27.06:0,27,341	0/0:29,0:28:63.21:0,63,1005	1/1:10,0:10:2.87:45,3,0	0/0:15,0:14:2.68:0,3,48	0/0:36,0:33:96.27:0,96,1495	0/0:24,0:23:45.07:0,45,696	0/0:23,0:22:63.22:0,63,1024	0/0:26,0:26:57.19:0,57,926	0/0:21,0:21:2.22:0,2,7	1/1:21,0:21:0.80:149,1,0	0/0:27,0:27:66.22:0,66,1032	0/0:21,0:20:6.02:0,6,109	0/1:22,3:25:47.08:165,0,47	0/0:25,0:24:44.71:0,45,673	0/0:2,0:2:5.99:0,6,62	0/0:22,0:20:52.55:0,53,699	0/0:24,0:22:54.18:0,54,854	0/0:16,0:16:33.11:0,33,538	./.	1/1:9,0:9:3.01:45,3,0	1/1:14,0:14:1.62:4,2,0	0/0:25,0:23:60.20:0,60,976	0/0:38,0:37:99:0,106,1638	0/0:26,0:26:65.16:0,65,1056	0/0:25,0:23:62.87:0,63,950
chr10	51161804	.	ATGTGTGTG	A	220.88	PASS	AB=0.685;AC=12;AF=0.250;AN=48;BaseQRankSum=4.280;DP=578;FS=1.404;HRun=0;HaplotypeScore=120.5763;InbreedingCoeff=0.5569;MQ=46.61;MQ0=20;MQRankSum=-1.754;QD=1.67;ReadPosRankSum=-2.067;VQSLOD=1.6862;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:5,10:14:0:0,0,0	0/1:5,0:6:0.16:0,0,0	./.	./.	0/0:27,0:25:39.13:0,39,1072	0/1:4,0:9:0:0,0,0	1/1:10,1:15:2.59:75,3,0	0/0:35,0:32:39.01:0,39,819	0/0:27,0:26:25.71:0,26,845	0/0:27,0:25:57.11:0,57,1462	0/0:28,0:28:48.15:0,48,1191	1/1:4,16:21:6.02:100,6,0	1/1:5,11:17:2.34:63,2,0	0/0:24,0:24:33.09:0,33,760	1/1:20,0:20:6.01:66,6,0	0/1:11,0:25:30.37:41,0,30	0/0:26,0:25:29.57:0,30,588	0/0:5,0:4:1.19:0,1,111	0/0:20,0:19:36.10:0,36,888	0/0:22,0:20:30.79:0,31,885	0/0:18,0:17:21.06:0,21,555	./.	./.	0/0:14,0:13:2.94:0,3,18	0/0:27,0:25:37.84:0,38,1032	0/0:41,0:40:81.20:0,81,2243	0/0:29,0:29:41.43:0,41,1013	0/0:23,0:21:48.16:0,48,1489
chr10	51162069	.	TTAAGTG	T	10507.80	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=16.083;DP=681;FS=14.501;HRun=0;HaplotypeScore=145.5074;InbreedingCoeff=0.9818;MQ=86.68;MQ0=0;MQRankSum=-18.102;QD=44.34;ReadPosRankSum=2.667;VQSLOD=3.7840;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,13:17:33.11:746,33,0	1/1:3,5:8:15.05:339,15,0	0/0:28,0:28:75.26:0,75,2236	0/0:26,0:26:57.13:0,57,1678	0/0:29,0:29:66.23:0,66,2264	1/1:1,19:20:48.16:1086,48,0	1/1:9,18:27:42.14:942,42,0	0/0:36,0:36:81.27:0,81,2679	0/0:29,1:30:10.36:0,10,2424	0/0:30,0:30:75.26:0,75,2492	0/0:17,0:17:48.16:0,48,1658	1/1:6,27:33:75.26:1696,75,0	1/1:3,27:30:60.21:1357,60,0	0/0:37,0:37:99:0,111,3657	1/1:4,26:30:66.23:1493,66,0	1/1:2,28:30:60.21:1357,60,0	0/0:22,0:22:60.18:0,60,1973	1/1:1,5:6:12.04:272,12,0	0/0:32,0:32:81.28:0,81,2731	0/0:14,0:14:36.12:0,36,1247	0/0:42,0:42:99:0,120,4051	1/1:2,7:9:12.04:270,12,0	1/1:6,8:14:21.07:475,21,0	1/1:2,11:13:21.07:475,21,0	0/0:12,0:12:33.11:0,33,1115	0/0:32,0:32:78.27:0,78,2702	0/0:33,0:33:93.32:0,93,3164	0/0:24,0:24:72.25:0,72,2486
chr10	51164232	.	T	TAGG	15503.20	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-17.004;DP=707;FS=10.952;HRun=0;HaplotypeScore=98.6130;InbreedingCoeff=0.9955;MQ=91.72;MQ0=0;MQRankSum=-8.831;QD=52.73;ReadPosRankSum=5.209;VQSLOD=6.5327;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,31:43:90.31:1954,90,0	1/1:2,17:19:42.14:927,42,0	0/0:36,0:35:93.19:0,93,1383	0/0:31,0:29:40.78:0,41,838	0/0:28,0:28:75.26:0,75,1200	1/1:0,21:22:63.22:1389,63,0	1/1:3,20:25:54.19:1190,54,0	0/0:37,0:37:99:0,102,1597	0/0:25,0:25:75.24:0,75,1182	0/0:24,0:24:66.20:0,66,999	0/0:19,0:19:45.14:0,45,700	1/1:1,16:17:48.16:1050,48,0	1/1:2,38:42:99:2515,114,0	0/0:13,0:13:30.08:0,30,457	1/1:7,26:33:75.26:1660,75,0	1/1:3,20:23:57.20:1248,57,0	0/0:24,0:24:66.20:0,66,1032	1/1:1,6:7:15.05:331,15,0	0/0:20,0:20:51.14:0,51,773	0/0:31,0:31:87.30:0,87,1397	0/0:31,0:31:93.25:0,93,1437	1/1:3,21:24:57.20:1255,57,0	1/1:5,15:20:45.15:992,45,0	1/1:1,18:19:45.15:993,45,0	0/0:27,0:27:81.28:0,81,1301	0/0:33,0:33:93.26:0,93,1441	0/0:27,0:27:75.26:0,75,1199	0/0:6,0:6:15.05:0,15,241
chr10	51167009	.	GA	G	7426.56	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=14.685;DP=695;FS=7.308;HRun=7;HaplotypeScore=67.2371;InbreedingCoeff=0.9984;MQ=79.81;MQ0=0;MQRankSum=-1.472;QD=26.06;ReadPosRankSum=3.921;VQSLOD=5.5168;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,21:21:57.13:581,57,0	1/1:1,9:10:24.05:245,24,0	0/0:16,0:16:42.13:0,42,515	0/0:22,0:22:57.17:0,57,687	0/0:31,0:31:90.27:0,90,1117	1/1:1,25:26:66.15:673,66,0	1/1:2,19:21:54.12:551,54,0	0/0:37,0:37:99:0,99,1195	0/0:30,0:30:87.27:0,87,1080	0/0:31,0:31:81.25:0,81,1008	0/0:25,0:25:66.21:0,66,829	1/1:1,30:31:84.19:856,84,0	1/1:2,29:31:87.20:887,87,0	0/0:27,0:27:78.22:0,78,944	1/1:2,32:34:90.20:918,90,0	1/1:6,19:25:19.38:513,19,0	0/0:26,0:26:69.22:0,69,867	1/1:1,10:11:24.05:245,24,0	0/0:31,0:31:84.25:0,84,1040	0/0:24,0:24:69.22:0,69,868	0/0:19,0:19:48.14:0,48,591	1/1:2,20:22:51.11:520,51,0	1/1:2,19:21:51.01:519,51,0	1/1:1,31:32:90.20:918,90,0	0/0:15,0:15:42.13:0,42,528	0/0:32,0:32:93.29:0,93,1160	0/0:35,0:35:96.31:0,96,1203	0/0:9,0:9:27.07:0,27,326
chr10	51167300	.	TGAGGAAAGGCCCCTCCTA	T	12072.20	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=14.576;DP=658;FS=5.288;HRun=0;HaplotypeScore=312.6750;InbreedingCoeff=0.9696;MQ=88.79;MQ0=0;MQRankSum=-14.896;QD=92.86;ReadPosRankSum=0.634;VQSLOD=3.9559;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,24:32:48.16:2471,48,0	0/0:11,0:11:33.11:0,33,2736	0/0:32,0:32:84.26:0,84,4643	0/0:20,0:20:54.15:0,54,3477	0/0:30,0:30:90.30:0,90,7038	0/0:31,0:31:90.31:0,90,7074	0/0:20,0:20:57.16:0,57,3825	0/0:37,0:37:99:0,102,6287	0/0:26,0:26:78.27:0,78,5542	0/0:21,0:21:63.22:0,63,5115	0/0:21,0:21:63.22:0,63,5037	1/1:2,27:29:69.24:3422,69,0	1/1:4,16:20:45.15:2179,45,0	0/0:32,0:32:96.32:0,96,7585	0/0:36,0:36:99:0,105,9025	0/0:25,0:25:72.25:0,72,6136	0/0:19,0:19:54.14:0,54,4145	1/1:1,3:4:9.03:467,9,0	0/0:16,0:16:45.15:0,45,3026	0/0:29,0:29:87.30:0,87,6530	0/0:36,0:36:99:0,108,8371	1/1:1,19:19:50.96:1921,51,0	1/1:4,11:15:33.03:1300,33,0	1/1:4,6:10:6.02:312,6,0	0/0:31,0:31:87.28:0,87,7123	0/0:18,0:18:45.15:0,45,3379	0/0:28,0:28:81.28:0,81,6540	0/0:9,0:9:27.09:0,27,2377
chr10	51168300	.	GA	G	4722.59	PASS	AB=0.900;AC=25;AF=0.446;AN=56;BaseQRankSum=13.812;DP=595;FS=7.065;HRun=9;HaplotypeScore=65.6922;InbreedingCoeff=0.9056;MQ=54.71;MQ0=32;MQRankSum=1.428;QD=17.89;ReadPosRankSum=5.047;VQSLOD=4.9694;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,41:47:99:932,102,0	1/1:2,11:12:30.01:274,30,0	0/0:14,1:2:3.01:0,3,35	0/1:8,1:4:10.36:10,0,28	0/0:26,0:24:48.13:0,48,540	1/1:2,19:21:48.02:439,48,0	1/1:5,15:18:42.02:383,42,0	0/0:31,0:31:77.74:0,78,792	0/0:22,0:22:45.13:0,45,512	0/0:18,0:18:51.15:0,51,588	0/0:12,0:12:33.09:0,33,372	1/1:0,13:13:17.96:165,18,0	1/1:2,13:15:33.02:302,33,0	0/0:26,1:27:35.72:0,36,655	1/1:3,16:17:38.91:357,39,0	1/1:3,19:22:48.51:512,49,0	0/0:35,0:34:96.29:0,96,1108	1/1:3,27:29:45:580,45,0	0/0:24,0:22:57.16:0,57,650	0/0:23,0:20:45.02:0,45,476	0/0:11,0:10:27.06:0,27,297	1/1:4,8:11:15:137,15,0	1/1:6,11:16:21:192,21,0	1/1:5,18:23:48.02:439,48,0	0/0:14,0:14:30.06:0,30,319	0/0:29,0:25:60.17:0,60,684	0/0:28,0:27:57.13:0,57,640	0/0:15,0:14:36.11:0,36,415
chr10	51169665	.	G	GAA	6542.14	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-9.772;DP=494;FS=5.145;HRun=7;HaplotypeScore=56.2054;InbreedingCoeff=0.9923;MQ=79.88;MQ0=0;MQRankSum=-2.283;QD=37.38;ReadPosRankSum=0.905;VQSLOD=4.4589;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,25:25:72.25:1181,72,0	1/1:0,8:8:24.08:394,24,0	0/0:15,0:15:33.01:0,33,341	0/0:11,0:11:14.91:0,15,163	0/0:29,0:29:78.23:0,78,909	1/1:2,0:16:36.02:339,36,0	1/1:1,1:11:18.03:174,18,0	0/0:26,0:26:60.16:0,60,699	0/0:13,0:13:39.10:0,39,444	0/0:27,0:27:75.10:0,75,857	0/0:33,0:33:87.23:0,87,1002	1/1:1,12:13:33.11:542,33,0	1/1:4,15:19:45.15:724,45,0	0/0:11,0:11:30.09:0,30,349	1/1:3,19:23:53.67:831,54,0	1/1:1,9:10:24.08:393,24,0	0/0:28,0:28:81.24:0,81,944	1/1:1,14:15:33.11:534,33,0	0/0:14,0:14:39.11:0,39,455	0/0:26,0:26:75.22:0,75,874	0/0:13,0:13:33.08:0,33,374	1/1:0,6:6:18.02:266,18,0	1/1:3,21:24:58.44:938,58,0	1/1:0,4:5:15.05:226,15,0	0/0:22,0:22:66.20:0,66,769	0/0:19,0:19:51.15:0,51,594	0/0:23,0:22:66.18:0,66,758	0/0:9,0:9:27.08:0,27,315
chr10	51170571	.	A	AT	3624.13	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=-11.445;DP=539;FS=13.539;HRun=7;HaplotypeScore=54.5820;InbreedingCoeff=0.8878;MQ=75.23;MQ0=0;MQRankSum=2.269;QD=27.25;ReadPosRankSum=2.370;VQSLOD=3.3152;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,23:27:66.20:797,66,0	0/0:7,0:7:21.03:0,21,203	0/0:9,0:9:2.02:0,2,90	0/1:11,0:11:0.22:0,0,29	0/0:24,0:24:60.09:0,60,579	0/0:32,0:32:96.12:0,96,916	0/0:16,0:16:39.04:0,39,368	0/0:35,0:35:87.10:0,87,830	0/0:22,0:22:63.08:0,63,603	0/0:17,0:17:51.06:0,51,485	0/0:21,0:21:57.09:0,57,550	1/1:1,10:11:24.07:290,24,0	1/1:0,20:20:54.17:652,54,0	0/0:17,0:17:48.08:0,48,464	0/0:19,0:19:42.04:0,42,400	0/0:19,0:19:54.08:0,54,521	0/0:23,0:23:66.08:0,66,629	1/1:0,12:12:36.11:435,36,0	0/0:19,0:19:51.07:0,51,493	0/0:27,0:27:69.09:0,69,660	0/0:14,0:14:36:0,36,333	1/1:2,15:17:42.13:507,42,0	1/1:2,15:17:39.12:471,39,0	1/1:2,16:18:39.12:471,39,0	0/0:25,0:25:69.10:0,69,666	0/0:30,0:30:87.14:0,87,840	0/0:27,0:27:72.10:0,72,689	0/0:2,0:2:3:0,3,29
chr10	51170901	.	C	CATTTACAGAATT	24374.55	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-4.243;DP=600;FS=6.853;HRun=0;HaplotypeScore=185.6058;InbreedingCoeff=0.9943;MQ=78.21;MQ0=0;MQRankSum=-16.727;QD=126.95;ReadPosRankSum=-1.840;VQSLOD=4.4832;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,4:9:21.07:1136,21,0	1/1:4,7:12:33.11:1895,33,0	0/0:23,0:23:63.22:0,63,2145	0/0:13,0:13:33.08:0,33,933	0/0:22,0:22:66.20:0,66,2256	1/1:6,9:21:42.14:2279,42,0	1/1:3,5:11:21.07:1038,21,0	0/0:38,0:38:99:0,114,3934	0/0:27,0:27:72.25:0,72,2653	0/0:31,0:31:90.31:0,90,3125	0/0:27,0:27:75.26:0,75,2708	1/1:4,10:14:36.12:2008,36,0	1/1:14,9:26:63.18:3166,63,0	0/0:19,0:19:57.20:0,57,2105	1/1:6,12:19:51.18:2774,51,0	1/1:6,10:19:48.16:2564,48,0	0/0:22,0:22:66.20:0,66,2315	1/1:1,4:7:15.05:923,15,0	0/0:18,0:18:51.18:0,51,1830	0/0:27,0:27:78.27:0,78,2727	0/0:16,0:16:39.13:0,39,1311	1/1:3,13:21:51.18:2834,51,0	1/1:14,9:24:66.14:2967,66,0	1/1:3,3:8:15.05:791,15,0	0/0:36,0:36:87.28:0,87,3110	0/0:28,0:28:81.28:0,81,3030	0/0:45,0:45:99:0,126,4415	0/0:16,0:16:36.11:0,36,1156
chr10	51171603	.	TA	T	933.80	PASS	AB=0.832;AC=9;AF=0.161;AN=56;BaseQRankSum=7.242;DP=638;FS=2.717;HRun=12;HaplotypeScore=79.5595;InbreedingCoeff=0.3134;MQ=76.23;MQ0=0;MQRankSum=-0.312;QD=5.73;ReadPosRankSum=2.675;VQSLOD=2.3118;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,3:38:46.45:0,46,782	0/1:3,6:9:6.80:98,0,7	0/0:19,0:15:15.65:0,16,123	0/0:22,0:20:13.51:0,14,139	0/0:29,1:30:43.17:0,43,583	0/1:13,3:16:33.70:34,0,216	0/1:19,2:21:8.25:8,0,314	0/1:32,3:36:11.16:11,0,395	0/0:26,0:26:69.10:0,69,682	0/0:19,2:21:1.61:0,2,375	0/0:19,2:22:0.83:0,1,394	0/0:15,0:16:35.91:0,36,349	0/0:18,2:20:10.63:0,11,466	0/0:22,1:23:30.81:0,31,467	1/1:6,23:29:59.73:464,60,0	1/1:5,24:30:44.96:450,45,0	0/0:30,0:30:63.10:0,63,626	0/0:9,0:9:27.02:0,27,260	0/0:17,0:21:31.92:0,32,323	0/0:25,1:26:25.70:0,26,408	0/1:18,3:22:15.69:16,0,370	0/0:17,1:18:22.74:0,23,400	0/0:16,0:20:42.37:0,42,401	0/0:21,1:22:39.87:0,40,574	0/0:22,1:23:30.82:0,31,473	0/0:18,1:21:21.52:0,22,369	0/0:25,1:32:54.58:0,55,695	0/0:14,0:14:39.03:0,39,379
chr10	51172071	.	AT	A	3482.18	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=10.147;DP=830;FS=12.128;HRun=2;HaplotypeScore=137.7574;InbreedingCoeff=0.9999;MQ=86.55;MQ0=0;MQRankSum=-3.617;QD=32.85;ReadPosRankSum=0.369;VQSLOD=1.7012;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,46:46:99:1400,114,0	0/0:13,0:13:39.09:0,39,558	0/0:31,0:31:90.20:0,90,1233	0/0:30,0:30:84.26:0,84,1156	0/0:23,0:23:69.22:0,69,1011	1/1:0,27:27:75.15:915,75,0	1/1:0,33:33:90.29:1167,90,0	0/0:32,0:32:87.29:0,87,1304	0/0:26,0:26:78.26:0,78,1151	0/0:30,0:30:84.28:0,84,1241	0/0:23,0:23:66.21:0,66,963	0/0:26,0:26:75.19:0,75,1065	0/0:30,0:30:84.27:0,84,1233	0/0:33,0:33:99:0,99,1440	0/0:43,0:43:99:0,129,1883	0/0:41,0:41:99:0,120,1750	0/0:34,0:34:99:0,102,1528	0/0:18,0:18:39.13:0,39,584	0/0:16,0:16:48.16:0,48,719	0/0:26,0:26:75.24:0,75,1087	0/0:56,0:56:99:0,162,2359	0/0:25,0:25:72.24:0,72,1062	0/0:22,0:22:63.17:0,63,923	0/0:33,0:33:90.29:0,90,1327	0/0:26,0:26:78.24:0,78,1131	0/0:39,0:39:99:0,114,1689	0/0:37,0:37:99:0,111,1620	0/0:11,0:11:33.11:0,33,495
chr10	51172164	.	TTCTTCCTA	T	10347.17	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=15.425;DP=717;FS=10.258;HRun=0;HaplotypeScore=229.8108;InbreedingCoeff=0.9720;MQ=88.44;MQ0=0;MQRankSum=-17.146;QD=53.06;ReadPosRankSum=1.941;VQSLOD=3.5279;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,23:29:63.11:1418,63,0	0/0:16,0:16:36.12:0,36,1566	0/0:31,0:31:84.22:0,84,3047	0/0:30,0:29:60.62:0,61,2047	0/0:19,0:19:54.19:0,54,2291	1/1:3,21:24:51.13:1339,51,0	1/1:5,21:26:51.04:1273,51,0	0/0:38,0:38:99:0,102,3925	0/0:30,0:30:84.27:0,84,3474	0/0:26,0:26:75.26:0,75,3189	0/0:16,0:16:48.16:0,48,2088	1/1:2,23:25:60.21:1648,60,0	1/1:7,30:37:78.17:2018,78,0	0/0:25,0:25:72.21:0,72,2697	0/0:39,0:39:99:0,105,4373	0/0:30,0:30:84.29:0,84,3547	0/0:23,0:23:63.22:0,63,2670	1/1:4,5:9:9.03:247,9,0	0/0:13,0:13:36.12:0,36,1374	0/0:28,0:28:84.29:0,84,3409	0/0:46,0:46:99:0,132,5160	1/1:1,16:17:48.12:1257,48,0	1/1:3,16:19:45.47:1048,45,0	1/1:0,9:9:5.43:98,5,0	0/0:34,0:34:93.32:0,93,3894	0/0:40,0:40:99:0,111,4639	0/0:29,0:29:78.27:0,78,3381	0/0:9,0:9:24.08:0,24,960
chr10	51172197	.	ATCT	A	1126.32	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=6.396;DP=685;FS=0.000;HRun=0;HaplotypeScore=159.1404;InbreedingCoeff=0.6692;MQ=77.85;MQ0=0;MQRankSum=-6.510;QD=25.60;ReadPosRankSum=0.324;VQSLOD=3.4731;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,25:29:75.26:1219,75,0	0/0:11,0:11:33.11:0,33,730	0/0:24,0:24:59.69:0,60,1278	0/1:15,0:14:10.12:10,0,614	0/0:21,0:21:60.19:0,60,1316	0/0:25,0:25:57.20:0,57,1269	0/0:23,0:23:51.09:0,51,1057	0/0:40,0:40:99:0,108,2384	0/0:27,0:27:78.26:0,78,1722	0/0:28,0:28:81.28:0,81,1807	0/0:24,0:24:66.21:0,66,1409	0/0:24,0:24:51.13:0,51,1104	0/0:31,0:31:75.26:0,75,1693	0/0:22,0:22:57.15:0,57,1242	0/0:32,0:32:90.29:0,90,1956	0/0:32,0:32:96.33:0,96,2171	0/0:31,0:31:90.31:0,90,1972	0/0:12,0:12:30.07:0,30,632	0/0:14,0:14:42.14:0,42,912	0/0:24,0:24:72.25:0,72,1599	0/0:27,0:27:81.28:0,81,1830	0/0:20,0:20:54.14:0,54,1171	0/0:23,0:23:63.17:0,63,1376	0/0:16,0:16:36.04:0,36,699	0/0:34,0:34:99:0,102,2312	0/0:34,0:34:99:0,102,2297	0/0:29,0:29:87.30:0,87,1917	0/0:13,0:13:33.11:0,33,748
chr10	51172558	.	G	GTT	6048.56	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=15.471;DP=633;FS=0.000;HRun=1;HaplotypeScore=87.2146;InbreedingCoeff=0.9916;MQ=78.40;MQ0=0;MQRankSum=-3.715;QD=30.55;ReadPosRankSum=1.911;VQSLOD=4.6907;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,13:16:26.11:417,26,0	0/0:6,0:6:18.04:0,18,267	0/0:17,0:17:44.77:0,45,567	0/0:14,0:14:20.43:0,20,241	0/0:26,0:26:78.20:0,78,1175	1/1:1,31:35:86.54:1224,87,0	1/1:2,7:10:11.02:176,11,0	0/0:31,0:31:87.28:0,87,1370	0/0:27,0:27:81.24:0,81,1287	0/0:34,0:34:99:0,99,1568	0/0:20,0:20:60.19:0,60,951	1/1:2,20:23:40.24:669,40,0	1/1:1,30:32:78.26:1177,78,0	0/0:26,0:26:75.24:0,75,1186	0/0:33,0:33:99:0,99,1515	0/0:24,0:24:69.20:0,69,1069	0/0:14,0:14:42.06:0,42,652	1/1:3,14:17:26.55:384,27,0	0/0:23,0:23:66.20:0,66,1022	0/0:22,0:22:66.20:0,66,1024	0/0:14,0:14:42.09:0,42,620	1/1:0,18:19:50.03:728,50,0	1/1:2,18:21:48:663,48,0	1/1:3,20:25:42.85:610,43,0	0/0:29,0:29:87.25:0,87,1341	0/0:20,0:20:59:0,59,911	0/0:40,0:39:99:0,117,1871	0/0:15,0:15:42.14:0,42,679
chr10	51173400	.	A	AACACACACACACACACACAC	5779.22	PASS	AB=1.000;AC=25;AF=0.446;AN=56;BaseQRankSum=4.941;DP=670;FS=1.298;HRun=0;HaplotypeScore=320.6778;InbreedingCoeff=0.6924;MQ=62.38;MQ0=6;MQRankSum=-6.789;QD=17.84;ReadPosRankSum=-2.763;VQSLOD=2.5882;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:31,0:31:20.20:743,20,0	1/1:5,0:5:3.01:211,3,0	0/0:31,0:22:23.04:0,23,460	0/0:20,0:14:12.02:0,12,184	0/0:33,0:40:78.25:0,78,3529	1/1:11,0:27:18.06:368,18,0	1/1:19,0:30:9.50:202,10,0	0/1:39,0:38:41.02:41,0,1049	0/0:18,0:18:24.07:0,24,930	0/0:35,0:39:54.15:0,54,2138	0/0:19,0:21:33.10:0,33,1303	0/1:18,0:18:4.42:109,0,4	1/1:16,0:25:15.05:884,15,0	0/0:22,0:21:10.56:0,11,1521	1/1:19,3:28:6.02:558,6,0	1/1:12,1:18:6.02:500,6,0	0/1:18,0:22:99:110,0,1412	1/1:10,0:10:9.03:324,9,0	0/0:17,0:17:23.82:0,24,855	0/0:31,0:31:69.07:0,69,2827	0/0:25,0:27:40.78:0,41,1847	1/1:16,0:30:12.04:684,12,0	1/1:22,0:20:15.03:749,15,0	1/1:19,0:18:5.59:296,6,0	0/0:30,0:32:60.19:0,60,2981	0/0:25,0:25:45.14:0,45,1995	0/0:13,0:14:30.06:0,30,1381	0/0:8,0:7:15.05:0,15,674
chr10	51174905	.	T	TCAAAG	14676.69	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=8.677;DP=685;FS=10.894;HRun=0;HaplotypeScore=138.1660;InbreedingCoeff=0.9974;MQ=77.08;MQ0=0;MQRankSum=-16.795;QD=63.54;ReadPosRankSum=-2.004;VQSLOD=5.0346;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,11:19:33.03:828,33,0	1/1:1,12:13:30.10:918,30,0	0/0:22,0:22:48.64:0,49,983	0/0:14,0:14:32.90:0,33,584	0/0:35,0:35:96.24:0,96,1764	0/0:31,0:31:72.25:0,72,1480	0/0:23,0:23:63.20:0,63,1267	0/0:29,0:29:75.22:0,75,1381	0/0:19,0:19:57.20:0,57,1180	0/0:44,0:44:99:0,126,2521	0/0:20,0:20:54.17:0,54,1064	1/1:1,23:26:66.23:1985,66,0	1/1:8,25:36:19.13:2275,19,0	0/0:26,0:26:75.23:0,75,1478	1/1:1,29:30:75.26:2292,75,0	1/1:8,14:27:48.16:1391,48,0	0/0:23,0:23:66.20:0,66,1308	1/1:5,10:15:36.12:1098,36,0	0/0:17,0:17:48.12:0,48,850	0/0:35,0:35:96.29:0,96,1846	0/0:20,0:20:51.18:0,51,1056	1/1:2,20:25:54.19:1616,54,0	1/1:6,17:24:60.21:1676,60,0	1/1:3,9:14:23.64:598,24,0	0/0:28,0:28:69.23:0,69,1392	0/0:26,0:26:72.24:0,72,1441	0/0:36,0:35:99:0,102,2074	0/0:6,0:6:18.06:0,18,368
chr10	51176074	.	TA	T	4761.66	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=13.402;DP=592;FS=0.000;HRun=8;HaplotypeScore=61.4651;InbreedingCoeff=0.9290;MQ=80.94;MQ0=0;MQRankSum=-3.730;QD=24.05;ReadPosRankSum=3.145;VQSLOD=5.4881;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,18:20:48.08:464,48,0	1/1:0,13:13:33.05:319,33,0	0/0:24,0:24:41.64:0,42,521	0/1:10,0:10:10.45:10,0,154	0/0:24,0:24:72.22:0,72,869	0/0:28,0:28:81.25:0,81,977	0/0:9,0:9:24.06:0,24,279	0/0:29,0:29:75.21:0,75,886	0/0:13,0:13:39.11:0,39,459	0/0:31,0:31:84.26:0,84,1012	0/0:29,0:29:81.25:0,81,976	1/1:1,23:24:69.11:666,69,0	1/1:2,16:18:45.07:435,45,0	0/0:25,0:25:63.19:0,63,760	1/1:0,21:21:60.10:579,60,0	1/1:3,19:22:48.08:464,48,0	0/0:19,0:19:48.15:0,48,580	1/1:2,17:19:51.08:492,51,0	0/0:14,0:14:42.13:0,42,507	0/0:26,0:26:75.23:0,75,905	0/0:11,0:11:33.09:0,33,387	1/1:0,13:13:36.06:348,36,0	1/1:4,26:30:78.12:753,78,0	1/1:0,8:8:24.04:232,24,0	0/0:31,0:30:90.27:0,90,1078	0/0:27,0:27:75.21:0,75,884	0/0:46,0:46:99:0,126,1492	0/0:8,0:8:24.07:0,24,290
chr10	51177628	.	T	TGAC	13927.36	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-15.697;DP=770;FS=0.618;HRun=0;HaplotypeScore=108.6377;InbreedingCoeff=0.9987;MQ=88.80;MQ0=0;MQRankSum=-4.889;QD=51.97;ReadPosRankSum=6.511;VQSLOD=6.6987;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,28:30:51.18:1135,51,0	1/1:1,12:13:33.11:736,33,0	0/0:33,0:33:75.09:0,75,1161	0/0:30,0:29:77.79:0,78,1128	0/0:31,0:31:84.24:0,84,1253	0/0:25,0:25:69.24:0,69,1123	0/0:39,0:39:99:0,114,1861	0/0:32,0:32:78.17:0,78,1198	0/0:25,0:25:72.24:0,72,1153	0/0:26,0:26:75.26:0,75,1213	0/0:14,0:14:39.12:0,39,603	1/1:1,29:30:81.28:1802,81,0	1/1:4,27:31:81.14:1769,81,0	0/0:33,0:33:84.28:0,84,1344	1/1:6,30:36:81.28:1807,81,0	1/1:5,25:30:63.22:1400,63,0	0/0:32,0:32:90.31:0,90,1470	1/1:0,23:23:63.22:1404,63,0	0/0:30,0:30:72.24:0,72,1139	0/0:29,0:29:84.24:0,84,1261	0/0:30,0:30:81.25:0,81,1273	1/1:2,20:22:48.16:1069,48,0	1/1:5,14:19:42.14:932,42,0	1/1:3,31:34:84.24:1873,84,0	0/0:34,0:34:99:0,99,1568	0/0:29,0:29:84.24:0,84,1256	0/0:24,0:24:72.19:0,72,1117	0/0:6,0:6:18.06:0,18,294
chr10	51177789	.	A	AT	1373.88	PASS	AB=0.962;AC=6;AF=0.107;AN=56;BaseQRankSum=-8.215;DP=715;FS=4.936;HRun=10;HaplotypeScore=83.6804;InbreedingCoeff=0.7272;MQ=74.11;MQ0=0;MQRankSum=0.374;QD=14.77;ReadPosRankSum=1.508;VQSLOD=4.1177;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:65.91:0,66,542	0/0:15,0:16:37.95:0,38,296	0/1:15,0:16:2.88:3,0,108	0/1:11,0:12:1.93:2,0,90	0/0:32,0:31:86.88:0,87,714	1/1:6,32:39:90.06:942,90,0	1/1:4,22:26:32.50:551,32,0	0/0:35,0:35:80.87:0,81,665	0/0:14,0:14:32.96:0,33,271	0/0:29,0:30:79.88:0,80,637	0/0:19,0:19:53.94:0,54,443	0/0:27,2:29:14.27:0,14,527	0/0:32,0:32:80.87:0,81,661	0/0:25,0:26:64.93:0,65,520	0/0:38,0:38:99:0,105,862	0/0:31,0:31:77.88:0,78,637	0/0:13,0:14:34.98:0,35,273	0/0:21,0:21:50.93:0,51,419	0/0:22,0:23:58.96:0,59,472	0/0:35,0:36:88.89:0,89,717	0/0:18,0:18:47.94:0,48,394	0/0:23,0:23:53.91:0,54,443	0/0:28,0:28:77.88:0,78,637	0/0:20,0:20:44.78:0,45,363	0/0:31,2:33:45.85:0,46,577	0/0:31,0:31:83.89:0,84,690	0/0:35,0:37:93.92:0,94,747	0/0:11,0:11:23.97:0,24,197
chr10	51178110	.	AG	A	7951.46	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=17.226;DP=703;FS=2.514;HRun=3;HaplotypeScore=64.0240;InbreedingCoeff=0.9954;MQ=78.96;MQ0=0;MQRankSum=-1.449;QD=33.98;ReadPosRankSum=4.714;VQSLOD=5.3618;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,18:18:54.17:669,54,0	1/1:1,14:15:39.12:484,39,0	0/0:17,0:17:45.15:0,45,635	0/0:15,0:15:36.97:0,37,475	0/0:31,0:31:93.30:0,93,1314	0/0:30,0:30:90.30:0,90,1294	0/0:18,0:18:54.18:0,54,776	0/0:46,0:46:99:0,123,1760	0/0:33,0:33:96.31:0,96,1358	0/0:44,0:44:99:0,132,1894	0/0:24,0:24:69.22:0,69,973	1/1:1,19:20:54.17:667,54,0	1/1:1,33:34:93.29:1148,93,0	0/0:25,0:25:75.25:0,75,1079	1/1:0,39:39:99:1302,105,0	1/1:1,24:25:63.20:781,63,0	0/0:19,0:19:57.19:0,57,819	1/1:1,15:16:42.13:521,42,0	0/0:20,0:20:57.17:0,57,799	0/0:33,0:33:96.32:0,96,1380	0/0:20,0:20:57.19:0,57,821	1/1:0,20:20:57.18:707,57,0	1/1:1,26:27:78.25:967,78,0	1/1:0,20:20:57.18:707,57,0	0/0:19,0:19:54.18:0,54,777	0/0:27,0:27:81.27:0,81,1166	0/0:44,0:44:99:0,132,1893	0/0:4,0:4:12.02:0,12,154
chr10	51180910	.	CAA	C	2435.44	PASS	AB=0.952;AC=21;AF=0.375;AN=56;BaseQRankSum=9.389;DP=514;FS=6.084;HRun=17;HaplotypeScore=85.7664;InbreedingCoeff=0.8845;MQ=72.36;MQ0=1;MQRankSum=0.404;QD=13.53;ReadPosRankSum=7.398;VQSLOD=2.6283;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,15:16:13.11:217,13,0	1/1:2,6:9:19.50:146,20,0	0/0:43,0:16:5.15:0,5,71	0/1:19,0:15:6.64:14,0,7	0/0:18,0:20:37.07:0,37,306	0/0:13,1:20:12.71:0,13,147	0/0:4,0:9:10.74:0,11,77	0/0:29,0:32:49.24:0,49,411	0/0:18,0:19:38.24:0,38,356	0/0:17,0:17:27.02:0,27,281	0/0:15,0:17:32.21:0,32,301	1/1:3,16:19:44.70:355,45,0	1/1:10,12:22:38.05:320,38,0	0/0:17,0:18:43.74:0,44,393	1/1:4,11:15:29.56:236,30,0	1/1:6,10:16:25.72:212,26,0	0/0:22,0:24:55.43:0,55,550	1/1:7,10:17:21.28:285,21,0	0/0:15,0:17:36.91:0,37,381	0/0:25,0:25:48.11:0,48,448	0/0:6,1:8:12.47:0,12,115	1/1:3,10:12:29.73:236,30,0	1/1:5,19:23:55.85:418,56,0	1/1:1,8:9:26.94:213,27,0	0/0:15,0:20:45.51:0,46,400	0/0:16,1:17:8:0,8,213	0/0:22,0:22:46.96:0,47,478	0/0:6,0:6:8.98:0,9,84
chr10	51181180	.	AACACAC	A	60.67	PASS	AB=0.868;AC=5;AF=0.104;AN=48;BaseQRankSum=4.212;DP=465;FS=2.547;HRun=0;HaplotypeScore=98.1000;InbreedingCoeff=0.0598;MQ=64.50;MQ0=22;MQRankSum=-1.050;QD=0.83;ReadPosRankSum=-0.212;VQSLOD=1.8121;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:21:6:0,6,61	./.	./.	./.	0/0:16,0:17:24.06:0,24,512	0/0:16,0:15:12.02:0,12,151	0/1:21,0:22:13.97:14,0,72	0/0:25,0:25:2.74:0,3,12	0/0:11,0:10:6.02:0,6,133	0/0:14,0:13:15.15:0,15,285	0/0:10,0:10:6.02:0,6,108	0/1:19,3:23:50.64:86,0,51	./.	0/0:13,0:12:12.02:0,12,311	1/1:14,0:17:0.88:2,1,0	0/1:8,1:10:29.66:55,0,30	0/0:22,0:23:24.08:0,24,579	0/0:9,0:8:0.89:0,1,2	0/0:15,0:15:3.90:0,4,71	0/0:11,0:11:10.43:0,10,300	0/0:19,0:19:9.03:0,9,223	0/0:12,0:11:9.03:0,9,150	0/0:17,2:18:3.01:0,3,47	0/0:20,0:22:18:0,18,209	0/0:16,0:16:24.08:0,24,683	0/0:21,0:21:20.03:0,20,372	0/0:17,0:17:16.61:0,17,461	0/0:11,0:10:27.09:0,27,638
chr10	51181452	.	T	TTGTC	2534.27	PASS	AB=0.875;AC=5;AF=0.089;AN=56;BaseQRankSum=-8.883;DP=782;FS=3.726;HRun=0;HaplotypeScore=145.9165;InbreedingCoeff=0.7824;MQ=76.29;MQ0=2;MQRankSum=0.099;QD=34.25;ReadPosRankSum=-2.971;VQSLOD=3.1750;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:48.21:0,48,795	0/0:4,0:4:9.03:0,9,105	0/0:37,0:32:17.79:0,18,251	0/0:32,0:29:21.07:0,21,328	0/0:33,0:33:54.17:0,54,837	1/1:10,30:40:87.30:2085,87,0	1/1:9,9:19:24.08:568,24,0	0/0:31,0:30:38.80:0,39,514	0/0:24,0:24:51.17:0,51,793	0/0:36,0:36:69.21:0,69,1042	0/0:20,0:20:39.13:0,39,616	0/0:34,0:34:62.25:0,62,934	0/0:37,0:37:84.72:0,85,986	0/0:37,0:37:90.28:0,90,1383	0/0:38,0:38:38.18:0,38,654	0/0:36,0:36:66.18:0,66,750	0/0:23,0:23:42.12:0,42,638	0/1:12,0:14:5.56:6,0,143	0/0:16,0:15:12.46:0,12,235	0/0:22,0:22:45.14:0,45,695	0/0:32,0:32:60.18:0,60,913	0/0:35,0:35:69.20:0,69,794	0/0:29,0:29:63.17:0,63,718	0/0:14,0:14:24.07:0,24,279	0/0:27,0:26:57.15:0,57,838	0/0:42,0:42:81.28:0,81,1284	0/0:25,0:25:51.17:0,51,814	0/0:9,0:9:21.07:0,21,335
chr10	51183770	.	ATG	A	452.68	PASS	AB=0.792;AC=8;AF=0.143;AN=56;BaseQRankSum=9.505;DP=440;FS=44.908;HRun=0;HaplotypeScore=92.4406;InbreedingCoeff=-0.1849;MQ=79.24;MQ0=3;MQRankSum=-4.689;QD=4.08;ReadPosRankSum=-1.284;VQSLOD=0.4167;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:60.21:0,60,1216	0/1:5,1:4:24.66:25,0,55	0/1:33,1:23:6.65:7,0,618	0/0:41,0:30:9.92:0,10,491	0/0:7,0:7:18.06:0,18,331	0/0:20,0:20:57.20:0,57,1156	0/0:19,1:20:20.51:0,21,915	0/0:35,0:33:96.33:0,96,1927	0/0:13,0:13:39.12:0,39,755	0/0:8,1:9:2.93:0,3,452	0/1:11,3:14:75.62:76,0,550	0/0:17,0:17:51.18:0,51,1024	0/0:19,0:19:57.20:0,57,1134	0/0:19,0:19:54.19:0,54,1095	0/0:12,0:12:36.12:0,36,730	0/0:7,0:7:21.07:0,21,427	0/0:19,0:19:57.20:0,57,1149	0/0:6,0:6:18.06:0,18,364	0/0:5,0:5:15.05:0,15,305	0/1:10,4:14:99:131,0,448	0/0:11,0:11:30.10:0,30,551	0/1:8,3:10:62.93:63,0,337	0/1:4,7:11:99:166,0,152	0/0:17,0:17:48.16:0,48,969	0/1:10,2:12:35.25:35,0,394	0/0:12,0:12:1.53:0,2,636	0/0:15,0:15:45.14:0,45,863	0/1:4,3:6:82.83:83,0,128
chr10	51183777	.	GATA	G	729.24	PASS	AB=0.801;AC=9;AF=0.161;AN=56;BaseQRankSum=8.786;DP=430;FS=49.686;HRun=0;HaplotypeScore=96.1657;InbreedingCoeff=-0.1933;MQ=79.27;MQ0=3;MQRankSum=-6.813;QD=7.60;ReadPosRankSum=1.283;VQSLOD=1.0263;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:21:57.19:0,57,1355	0/1:5,1:4:35.21:35,0,68	0/0:41,0:25:58:0,58,1031	0/0:43,0:28:50.51:0,51,843	0/0:5,1:6:15.05:0,15,370	0/0:20,0:20:57.20:0,57,1396	0/0:16,1:17:3.97:0,4,991	0/0:29,0:27:75.25:0,75,1826	0/0:12,0:12:33.11:0,33,809	0/1:8,1:9:4.63:5,0,564	0/1:9,4:13:99:122,0,566	0/0:16,0:16:45.15:0,45,1105	0/0:17,0:17:48.12:0,48,1124	0/0:20,0:20:60.21:0,60,1474	0/0:12,0:12:36.12:0,36,886	0/0:7,0:7:21.07:0,21,518	0/0:20,0:20:57.20:0,57,1381	0/0:6,0:6:18.06:0,18,443	0/0:5,0:5:15.05:0,15,370	0/1:10,4:14:99:179,0,551	0/0:10,0:10:30.10:0,30,738	0/1:8,3:10:94.21:94,0,415	0/1:4,7:11:99:246,0,190	0/0:16,0:16:45.15:0,45,1107	0/1:11,2:12:58.87:59,0,419	0/1:10,1:11:13.50:13,0,701	0/0:14,0:14:39.13:0,39,935	0/1:5,3:5:99:113,0,133
chr10	51183831	.	AGGGG	A	1491.96	PASS	AB=0.901;AC=16;AF=0.308;AN=52;BaseQRankSum=6.421;DP=312;FS=16.933;HRun=6;HaplotypeScore=91.6823;InbreedingCoeff=0.0291;MQ=51.43;MQ0=13;MQRankSum=-6.088;QD=10.01;ReadPosRankSum=2.635;VQSLOD=-0.6125;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:10,0:9:9.38:9,0,284	./.	0/0:33,0:11:11.69:0,12,288	0/1:26,2:11:32.45:32,0,326	0/0:10,0:8:6.02:0,6,135	1/1:9,4:15:30.04:465,30,0	1/1:3,9:13:36.12:643,36,0	0/0:15,0:11:18.06:0,18,467	0/1:10,0:10:3.40:3,0,507	0/0:9,0:9:21.03:0,21,452	0/0:7,0:7:15.05:0,15,395	0/1:6,2:8:36.52:151,0,37	0/1:7,0:6:36.67:37,0,95	0/0:10,0:10:30:0,30,506	0/1:6,3:8:99:122,0,153	0/0:5,0:5:12.02:0,12,146	0/0:13,0:13:39.13:0,39,918	0/1:3,1:4:31.76:32,0,61	0/0:7,0:6:12.01:0,12,246	0/1:8,1:9:49.56:50,0,76	0/0:15,0:14:36.09:0,36,782	0/0:7,0:5:9.02:0,9,140	1/1:8,0:8:3.01:51,3,0	./.	0/0:10,1:9:15.05:0,15,339	0/0:5,0:6:2.98:0,3,216	0/1:15,0:15:16.13:16,0,908	0/1:10,1:6:40.88:41,0,155
chr10	51183836	.	G	GAA	160.42	PASS	AB=0.992;AC=12;AF=0.222;AN=54;BaseQRankSum=6.310;DP=282;FS=8.106;HRun=0;HaplotypeScore=71.0097;InbreedingCoeff=0.1977;MQ=48.83;MQ0=14;MQRankSum=-4.594;QD=1.98;ReadPosRankSum=0.892;VQSLOD=0.7652;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:12:23.60:0,24,278	./.	0/0:32,0:10:20.42:0,20,247	0/0:26,0:9:14.40:0,14,196	0/0:7,0:5:5.89:0,6,93	1/1:11,3:14:10.55:122,11,0	0/1:13,1:13:60.64:113,0,61	0/0:17,0:13:21.02:0,21,336	0/0:10,0:10:11.73:0,12,406	0/0:7,0:7:21.06:0,21,312	0/0:5,0:5:15.05:0,15,244	0/1:8,0:8:6.46:6,0,105	0/1:8,0:7:0.01:0,0,150	0/0:10,0:10:27.05:0,27,365	0/1:9,0:8:0.86:1,0,147	0/0:4,0:4:12.03:0,12,148	0/0:13,0:13:39.06:0,39,576	0/1:6,0:5:23.04:23,0,62	0/0:8,0:7:10.32:0,10,170	0/0:4,0:4:3.91:0,4,94	0/0:14,0:12:30.10:0,30,481	0/0:5,0:3:9.03:0,9,113	1/1:1,0:1:2.68:11,3,0	0/1:8,0:5:0:0,0,0	0/0:8,0:6:15.02:0,15,216	0/1:5,0:5:2:2,0,134	0/0:15,0:15:39.98:0,40,597	0/1:8,0:3:2.70:3,0,89
chr10	51183857	.	G	GA	2393.84	PASS	AB=0.988;AC=29;AF=0.518;AN=56;BaseQRankSum=2.989;DP=305;FS=48.558;HRun=4;HaplotypeScore=75.2686;InbreedingCoeff=0.5398;MQ=42.33;MQ0=10;MQRankSum=-4.282;QD=13.45;ReadPosRankSum=-0.780;VQSLOD=-0.0917;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,11:14:25.28:310,25,0	1/1:1,3:3:9.03:123,9,0	0/0:31,0:9:20.85:0,21,228	0/0:22,0:6:11.83:0,12,101	0/0:3,0:3:5.65:0,6,68	1/1:7,5:16:34.90:342,35,0	1/1:8,7:16:38.96:428,39,0	0/1:23,0:20:39.42:39,0,260	0/1:13,0:13:6.77:7,0,272	0/0:8,0:8:21.06:0,21,238	0/0:8,0:7:12.03:0,12,136	1/1:2,8:10:24.03:282,24,0	1/1:5,6:11:19.50:280,19,0	0/1:15,0:16:49.87:50,0,270	1/1:2,3:5:12.04:163,12,0	1/1:0,4:4:12.04:163,12,0	0/0:8,0:8:22.31:0,22,241	1/1:1,1:3:5.04:46,5,0	0/1:6,0:6:24.76:25,0,117	0/0:10,0:10:20.92:0,21,219	0/0:10,0:9:4.56:0,5,219	1/1:1,5:5:12.04:164,12,0	1/1:0,2:2:5.98:61,6,0	1/1:3,3:6:6.09:107,6,0	0/0:13,0:13:33.09:0,33,373	0/0:7,0:8:19.87:0,20,210	0/1:17,0:17:3.81:4,0,295	0/0:4,0:1:2.80:0,3,13
chr10	51183859	.	A	AG	1272.38	PASS	AB=0.918;AC=26;AF=0.464;AN=56;BaseQRankSum=9.659;DP=295;FS=45.476;HRun=0;HaplotypeScore=74.2616;InbreedingCoeff=0.6523;MQ=42.59;MQ0=11;MQRankSum=-4.765;QD=10.43;ReadPosRankSum=1.542;VQSLOD=1.8523;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:14:5.15:131,5,0	1/1:4,0:3:8.90:60,9,0	0/0:29,0:9:21.04:0,21,253	0/0:23,0:6:11.95:0,12,133	0/0:3,0:3:6.49:0,6,84	1/1:12,2:14:35.90:367,36,0	1/1:12,3:15:37.22:327,37,0	0/0:21,0:18:25.09:0,25,415	0/1:11,1:13:10.20:10,0,359	0/0:8,0:8:21.07:0,21,289	0/0:8,0:7:20.85:0,21,222	1/1:10,0:10:20.42:121,20,0	0/1:10,0:11:2.32:120,0,2	0/0:15,0:15:0.04:0,0,377	1/1:5,0:5:11.54:67,12,0	1/1:5,0:5:14.39:83,14,0	0/0:8,0:8:24.05:0,24,316	1/1:4,0:3:8.85:58,9,0	0/1:6,0:6:1.77:2,0,129	0/0:11,0:10:22.75:0,23,294	0/0:10,0:9:24.01:0,24,334	0/1:7,1:5:0.76:39,0,1	1/1:2,0:2:2.92:21,3,0	1/1:7,0:5:9.97:55,10,0	0/0:14,0:13:39.03:0,39,497	0/0:7,0:7:17.61:0,18,251	0/0:15,0:16:34.57:0,35,446	1/1:3,0:1:1.55:4,2,0
chr10	51183860	.	A	AG	1445.27	PASS	AB=0.883;AC=30;AF=0.536;AN=56;BaseQRankSum=9.356;DP=299;FS=48.332;HRun=0;HaplotypeScore=74.8094;InbreedingCoeff=0.3317;MQ=42.47;MQ0=9;MQRankSum=-3.633;QD=7.77;ReadPosRankSum=2.319;VQSLOD=1.6912;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:14:4.70:119,5,0	1/1:4,0:3:8.91:61,9,0	0/0:28,0:9:21.05:0,21,265	0/0:24,0:6:14.95:0,15,149	0/0:3,0:3:6.02:0,6,84	1/1:13,0:14:17.99:208,18,0	1/1:14,2:16:41.08:352,41,0	0/1:17,4:18:94.20:94,0,384	0/1:12,1:13:13.85:14,0,363	0/0:8,0:8:21.07:0,21,292	0/0:8,0:7:20.94:0,21,227	1/1:9,1:10:1.22:135,1,0	1/1:8,3:11:23.33:166,23,0	0/1:13,1:15:36.56:37,0,380	0/1:5,1:6:0.32:48,0,0	1/1:5,0:5:14.48:91,14,0	0/0:8,0:8:24.05:0,24,315	1/1:3,0:3:8.79:57,9,0	0/1:4,2:6:50.65:51,0,149	0/0:13,0:12:7.35:0,7,321	0/1:10,1:10:10.29:10,0,307	0/1:8,0:5:5.70:41,0,6	1/1:2,0:2:2.92:21,3,0	1/1:6,1:5:9.43:90,9,0	0/0:14,0:13:39.04:0,39,500	0/0:7,0:7:20.10:0,20,257	0/1:14,2:16:31.65:32,0,396	1/1:3,0:1:0.89:2,1,0
chr10	51184243	.	GGAA	G	1153.37	PASS	AB=0.949;AC=11;AF=0.239;AN=46;BaseQRankSum=-2.016;DP=899;FS=13.725;HRun=0;HaplotypeScore=124.2436;InbreedingCoeff=-0.0733;MQ=20.35;MQ0=376;MQRankSum=-2.653;QD=3.29;ReadPosRankSum=-2.062;VQSLOD=1.2295;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:9:6.02:0,6,68	./.	./.	./.	0/0:33,0:28:2.09:0,2,35	0/0:29,0:6:0.89:0,1,2	./.	./.	0/0:29,0:17:41.91:0,42,449	1/1:32,2:23:3.05:197,3,0	1/1:23,13:20:3.49:63,3,0	0/0:25,0:10:9:0,9,99	0/0:30,0:8:3.01:0,3,35	0/1:22,2:9:23.28:131,0,23	0/0:30,0:5:3.01:0,3,35	0/0:21,0:9:12.04:0,12,141	0/0:76,0:30:45.13:0,45,625	0/0:44,0:11:15.05:0,15,197	0/1:28,0:13:68.26:68,0,155	0/1:49,0:33:43.95:114,0,44	0/0:17,0:2:2.94:0,3,18	0/0:32,0:12:7.78:0,8,80	0/0:21,0:6:3.01:0,3,37	0/0:48,0:10:15.93:0,16,170	0/1:31,5:28:17.09:177,0,17	0/1:63,6:35:99:401,0,155	0/1:40,0:26:99:100,0,155	0/1:32,1:14:29.91:30,0,45
chr10	51184413	.	AAG	A	637.24	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=0.142;DP=791;FS=9.356;HRun=0;HaplotypeScore=77.3623;InbreedingCoeff=0.8322;MQ=42.15;MQ0=126;MQRankSum=-1.622;QD=14.82;ReadPosRankSum=1.204;VQSLOD=2.9789;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:33:81.78:0,82,955	0/0:2,0:2:6.02:0,6,74	0/0:8,0:6:18.04:0,18,206	0/0:10,0:8:24.06:0,24,279	0/0:33,0:24:68.94:0,69,833	1/1:25,0:18:51.17:705,51,0	1/1:7,11:11:3.01:41,3,0	0/0:42,0:19:54.17:0,54,668	0/0:27,0:23:57.45:0,57,674	0/0:36,0:27:78.25:0,78,984	0/0:15,0:10:27.08:0,27,334	0/0:31,0:26:57.43:0,57,697	0/0:40,0:29:60.19:0,60,776	0/0:25,0:20:54.17:0,54,667	0/0:42,0:29:65.23:0,65,781	0/0:27,0:20:50.94:0,51,611	0/0:36,0:20:45.14:0,45,554	0/0:23,0:14:13.07:0,13,436	0/0:29,0:21:63.20:0,63,797	0/0:26,0:18:32.33:0,32,547	0/0:30,0:22:25.19:0,25,631	0/0:22,0:16:42.13:0,42,520	0/0:21,0:20:50.28:0,50,606	0/0:60,0:40:50.70:0,51,1050	0/0:24,0:22:55.99:0,56,748	0/0:48,0:27:79.10:0,79,958	0/0:29,0:20:53.20:0,53,639	0/0:13,0:8:19.78:0,20,194
chr10	51184415	.	G	GA	637.27	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=0.106;DP=784;FS=8.833;HRun=2;HaplotypeScore=69.9368;InbreedingCoeff=0.8223;MQ=44.67;MQ0=119;MQRankSum=-1.834;QD=15.17;ReadPosRankSum=0.951;VQSLOD=2.6504;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:51,1:36:83.77:0,84,991	0/0:2,0:2:6.02:0,6,74	0/0:10,0:8:21.02:0,21,224	0/0:10,0:8:23.97:0,24,268	0/0:33,0:24:68.06:0,68,765	1/1:6,19:18:51.17:705,51,0	1/1:17,0:11:3.01:41,3,0	0/0:43,0:21:57.16:0,57,689	0/0:25,0:21:52.05:0,52,631	0/0:38,0:29:84.20:0,84,993	0/0:14,0:10:27.05:0,27,333	0/0:30,0:25:38.44:0,38,661	0/0:39,0:28:57.17:0,57,688	0/0:24,0:20:54.17:0,54,662	0/0:41,0:28:64.07:0,64,767	0/0:25,0:19:46.35:0,46,539	0/0:34,1:22:48.13:0,48,579	0/0:22,0:14:10.85:0,11,423	0/0:28,0:21:63.19:0,63,764	0/0:25,0:17:15.54:0,16,469	0/0:30,0:23:37.36:0,37,660	0/0:20,0:15:42.13:0,42,517	0/0:20,0:19:48.54:0,49,569	0/0:61,0:42:56.43:0,56,1028	0/0:24,0:22:58.41:0,58,692	0/0:47,0:27:77.04:0,77,918	0/0:30,0:21:52.04:0,52,621	0/0:13,0:8:21.06:0,21,247
chr10	51187734	.	CACACACAT	C	2133.61	PASS	AB=0.980;AC=22;AF=0.393;AN=56;BaseQRankSum=9.674;DP=1171;FS=45.735;HRun=0;HaplotypeScore=315.3959;InbreedingCoeff=0.8048;MQ=48.65;MQ0=31;MQRankSum=-2.160;QD=4.88;ReadPosRankSum=-1.546;VQSLOD=1.0552;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:34,1:36:28.33:262,28,0	1/1:11,2:11:6.41:57,6,0	0/0:67,0:33:63.36:0,63,768	0/0:68,0:43:71.47:0,71,1662	0/0:34,0:33:87.28:0,87,2625	1/1:36,0:36:11.53:118,12,0	1/1:35,0:30:31.43:254,31,0	0/0:73,0:59:99:0,126,2706	0/0:51,0:50:99:0,108,3601	0/0:62,0:53:99:0,105,3982	0/0:28,0:28:66.22:0,66,2364	0/1:47,2:47:8.60:161,0,9	1/1:46,1:44:4.65:230,5,0	0/0:49,0:49:99:0,132,4050	1/1:50,1:46:20.97:250,21,0	1/1:58,1:57:17.51:235,18,0	0/0:51,0:51:99:0,112,3679	0/1:20,0:19:7.63:266,0,8	0/0:27,0:22:41.72:0,42,1311	0/0:26,0:25:72.24:0,72,2187	0/0:65,0:63:99:0,123,3885	1/1:29,3:31:11.62:130,12,0	1/1:34,1:34:23.95:343,24,0	1/1:24,0:23:5.49:37,5,0	0/0:36,0:37:78.26:0,78,2611	0/0:50,0:47:99:0,115,4141	0/0:38,0:38:94.49:0,94,2612	0/0:6,0:6:15.05:0,15,386
chr10	51187738	.	C	CAT	642.80	PASS	AB=0.956;AC=14;AF=0.250;AN=56;BaseQRankSum=11.632;DP=1191;FS=15.362;HRun=0;HaplotypeScore=239.6308;InbreedingCoeff=0.2312;MQ=45.94;MQ0=36;MQRankSum=-2.963;QD=1.52;ReadPosRankSum=-0.948;VQSLOD=1.1105;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:35,0:35:47.71:48,0,49	0/1:13,0:11:13.20:13,0,15	0/0:62,0:28:62.06:0,62,933	0/0:62,0:37:99:0,103,1507	0/0:34,0:32:90.27:0,90,1321	0/1:36,0:36:36.67:37,0,43	0/1:31,2:28:45.51:46,0,61	0/0:78,0:59:99:0,147,2040	0/0:50,2:51:99:0,114,1694	0/0:65,0:55:99:0,135,1935	0/0:30,0:30:78.21:0,78,1107	1/1:42,9:49:17.76:138,18,0	1/1:40,8:45:4.42:136,4,0	0/0:49,0:49:99:0,138,2016	0/1:46,7:48:1.86:93,0,2	0/1:60,1:59:21.71:69,0,22	0/0:50,0:50:99:0,113,1743	0/1:21,1:21:66.26:72,0,66	0/0:26,0:21:38.13:0,38,698	0/0:29,0:28:75.17:0,75,1092	0/0:68,1:66:99:0,129,1882	0/1:31,5:35:23.75:35,0,24	1/1:30,6:35:16.06:122,16,0	0/0:25,1:24:0.38:0,0,11	0/0:39,0:39:84.24:0,84,1222	0/0:52,1:49:98.05:0,98,2005	0/0:38,0:38:99:0,102,1451	0/0:5,0:5:15.05:0,15,229
chr10	51187752	.	TAC	T	574.45	PASS	AB=0.889;AC=17;AF=0.304;AN=56;BaseQRankSum=9.568;DP=1204;FS=8.932;HRun=0;HaplotypeScore=230.7292;InbreedingCoeff=0.4309;MQ=41.64;MQ0=65;MQRankSum=-7.453;QD=1.25;ReadPosRankSum=-1.275;VQSLOD=1.1254;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:27,3:30:0.46:1,0,0	0/1:12,2:12:5.10:27,0,5	0/0:35,0:8:14.30:0,14,133	0/0:44,1:22:31.90:0,32,509	0/0:34,0:32:81.26:0,81,1351	1/1:30,6:37:5.52:50,6,0	1/1:34,3:28:9.84:79,10,0	0/0:95,0:62:99:0,122,1769	0/0:51,0:50:93.30:0,93,1561	0/0:71,0:56:96.96:0,97,1986	0/0:31,0:30:77.84:0,78,1307	0/1:42,6:46:46.95:79,0,47	0/1:47,3:47:42.95:177,0,43	0/0:49,0:49:99:0,111,1907	1/1:54,2:50:11.72:99,12,0	0/1:63,3:63:22.15:90,0,22	0/0:48,0:48:99:0,112,1858	0/1:22,1:22:16.09:99,0,16	0/0:31,0:21:42.03:0,42,639	0/0:33,0:31:34.28:0,34,1159	0/0:81,0:76:99:0,138,2217	0/1:28,10:37:0.03:0,0,0	1/1:30,5:32:5.63:33,6,0	0/1:19,6:23:0:0,0,0	0/0:43,0:43:78.27:0,78,1329	0/0:53,4:50:88.96:0,89,1974	0/0:33,0:32:69.13:0,69,1133	0/0:6,0:6:9.03:0,9,146
chr10	51187758	.	C	CAT	1379.20	PASS	AB=0.838;AC=17;AF=0.304;AN=56;BaseQRankSum=8.920;DP=1201;FS=9.151;HRun=0;HaplotypeScore=235.5484;InbreedingCoeff=0.5159;MQ=40.04;MQ0=67;MQRankSum=-6.303;QD=2.95;ReadPosRankSum=-0.206;VQSLOD=1.1505;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:17,7:24:2.92:18,3,0	1/1:10,4:12:3.44:56,3,0	0/0:20,0:5:14.96:0,15,163	0/0:35,0:16:43.28:0,43,524	0/0:34,0:32:84.25:0,84,1236	0/1:32,5:37:0.23:158,0,0	1/1:26,7:25:11.92:176,12,0	0/0:102,0:64:99:0,147,1896	0/0:48,0:47:96.30:0,96,1420	0/0:75,0:60:99:0,117,1988	0/0:34,0:32:81.24:0,81,1192	0/1:38,11:47:3.69:130,0,4	0/1:43,11:51:84.67:274,0,85	0/0:49,0:49:99:0,120,1768	1/1:45,15:54:11.61:198,12,0	0/1:52,17:66:31.55:130,0,32	0/0:47,0:47:99:0,119,1670	0/1:19,5:23:4.37:288,0,4	0/0:28,0:19:48.03:0,48,655	0/0:32,0:30:81.07:0,81,1129	0/0:87,0:81:99:0,141,2061	0/1:37,4:40:0:1,0,0	1/1:31,4:32:6.02:113,6,0	0/1:20,7:25:0.45:1,0,0	0/0:45,0:45:90.22:0,90,1287	0/0:57,0:49:99:0,131,1838	0/0:32,0:31:72.20:0,72,1064	0/0:4,0:4:9.03:0,9,132
chr10	51187762	.	T	TAC	564.79	PASS	AB=0.866;AC=17;AF=0.304;AN=56;BaseQRankSum=9.211;DP=1226;FS=2.380;HRun=0;HaplotypeScore=236.1807;InbreedingCoeff=0.4536;MQ=39.71;MQ0=75;MQRankSum=-8.341;QD=1.19;ReadPosRankSum=-0.171;VQSLOD=2.5653;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,4:24:0.57:2,1,0	0/1:12,3:13:2.22:45,0,2	0/0:16,0:5:2.50:0,2,23	0/1:25,0:13:5.01:5,0,10	0/0:36,0:34:72.22:0,72,940	0/1:35,0:41:1.98:12,0,2	0/0:33,1:26:0.41:0,0,2	0/0:104,0:59:89.31:0,89,1132	0/0:53,0:49:90.27:0,90,1176	0/0:77,1:62:99:0,147,1881	0/0:35,0:33:84.24:0,84,1080	1/1:25,23:45:14.07:143,14,0	0/1:34,20:52:74.42:189,0,74	0/0:47,0:47:99:0,120,1592	1/1:56,9:58:11.61:155,12,0	1/1:60,10:67:5.28:36,5,0	0/0:50,0:50:99:0,108,1442	0/1:21,3:22:37.72:122,0,38	0/0:30,0:20:51.14:0,51,622	0/0:31,0:29:78.23:0,78,996	0/0:96,0:86:99:0,132,1744	0/1:29,13:42:0:0,0,0	1/1:14,15:29:2.29:6,2,0	0/1:18,4:24:0.05:0,0,0	0/0:42,1:43:81.24:0,81,1055	0/0:58,0:51:92.95:0,93,1477	0/0:34,0:32:69.14:0,69,864	0/0:3,0:3:6.02:0,6,80
chr10	51187776	.	CACAT	C	138.98	PASS	AB=0.973;AC=15;AF=0.288;AN=52;BaseQRankSum=9.188;DP=1190;FS=0.691;HRun=0;HaplotypeScore=264.0515;InbreedingCoeff=0.4307;MQ=39.26;MQ0=79;MQRankSum=-8.783;QD=0.36;ReadPosRankSum=-3.002;VQSLOD=1.9356;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:27,3:28:1.75:7,2,0	0/1:16,1:14:10.07:10,0,74	./.	./.	0/0:37,0:35:87.23:0,87,2053	1/1:42,0:42:7.13:69,7,0	1/1:35,1:22:2.02:13,2,0	0/0:100,0:53:79.14:0,79,2228	0/0:52,0:48:87.27:0,87,1977	0/0:75,0:59:99:0,131,3223	0/0:31,0:28:72.23:0,72,1867	1/1:52,0:49:8.15:81,8,0	0/1:54,0:51:60.19:60,0,271	0/0:46,0:46:99:0,120,2936	1/1:72,4:66:0.89:23,1,0	0/0:71,2:67:7.03:0,7,50	0/0:46,0:46:96.90:0,97,2587	0/1:25,1:21:15.10:15,0,86	0/0:28,0:19:43.94:0,44,937	0/0:33,0:31:87.23:0,87,2090	0/0:96,0:86:99:0,138,3389	0/0:46,1:46:2.84:0,3,15	0/1:32,0:30:0:0,0,1	0/1:23,1:21:0:0,0,1	0/0:42,0:42:72.14:0,72,1718	0/0:58,0:51:99:0,144,3411	0/0:34,0:32:67.74:0,68,1417	0/0:3,0:3:6.02:0,6,162
chr10	51187778	.	CAT	C	162.38	PASS	AB=0.956;AC=14;AF=0.269;AN=52;BaseQRankSum=9.299;DP=1178;FS=4.166;HRun=0;HaplotypeScore=241.1407;InbreedingCoeff=0.4147;MQ=39.30;MQ0=75;MQRankSum=-8.742;QD=0.37;ReadPosRankSum=-2.038;VQSLOD=2.1665;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:29,2:29:5.43:29,5,0	0/1:15,2:14:8.98:9,0,51	./.	./.	0/0:37,0:35:87.23:0,87,1550	1/1:42,0:42:3.29:44,3,0	0/1:37,0:23:0.56:1,0,1	0/0:90,3:50:63.61:0,64,1730	0/0:49,0:45:87.21:0,87,1535	0/0:72,2:60:54.77:0,55,2311	0/0:31,2:29:60.18:0,60,1362	1/1:47,5:49:9.21:58,9,0	0/1:51,2:50:99:116,0,138	0/0:47,0:47:99:0,123,2197	1/1:76,1:67:4.77:35,5,0	0/1:71,2:67:3.19:3,0,21	0/0:46,0:46:87.46:0,87,1904	0/0:25,0:20:0.96:0,1,81	0/1:26,1:19:0.34:0,0,660	0/0:33,0:31:87.21:0,87,1525	0/0:94,0:84:99:0,138,2493	0/0:44,4:47:1.55:0,2,5	0/1:31,2:31:0:0,0,1	0/0:23,2:22:0:0,0,1	0/0:38,1:40:75.13:0,75,1326	0/0:58,0:52:99:0,147,2534	0/0:29,2:29:22.92:0,23,998	0/0:3,0:3:6.02:0,6,116
chr10	51187780	.	T	TAC	313.43	PASS	AB=0.917;AC=15;AF=0.288;AN=52;BaseQRankSum=8.537;DP=1178;FS=0.000;HRun=0;HaplotypeScore=255.3976;InbreedingCoeff=0.3561;MQ=39.22;MQ0=71;MQRankSum=-8.109;QD=0.60;ReadPosRankSum=-3.708;VQSLOD=1.8915;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:33,1:32:2.88:16,3,0	0/1:15,2:14:34.88:47,0,35	./.	./.	0/0:37,0:35:81.25:0,81,1090	0/1:19,6:46:2.58:52,0,3	0/1:26,2:23:0.38:0,0,0	0/0:91,0:49:99:0,105,1323	0/0:48,0:44:70.10:0,70,930	0/0:71,0:58:99:0,127,1673	0/0:32,0:28:72.21:0,72,955	0/1:51,0:48:4.58:16,0,5	0/1:54,0:51:91.31:91,0,130	0/0:47,0:47:99:0,120,1634	1/1:67,5:66:8.09:73,8,0	0/1:64,5:65:0.67:37,0,1	0/0:47,0:47:95.30:0,95,1348	0/1:21,3:19:34.40:108,0,34	0/0:24,0:18:35.79:0,36,464	0/0:33,0:31:87.29:0,87,1189	0/0:95,0:85:99:0,124,1682	1/1:50,0:49:2.60:10,3,0	0/1:35,0:33:0.01:0,0,0	0/1:25,0:21:0.04:0,0,0	0/0:39,1:40:66.20:0,66,877	0/0:58,0:53:99:0,141,1870	0/0:31,0:29:62.77:0,63,804	0/0:3,0:3:6.02:0,6,82
chr10	51187782	.	C	CAT	269.76	PASS	AB=0.970;AC=13;AF=0.250;AN=52;BaseQRankSum=7.223;DP=1166;FS=0.911;HRun=0;HaplotypeScore=242.5467;InbreedingCoeff=0.3163;MQ=39.26;MQ0=71;MQRankSum=-7.188;QD=0.63;ReadPosRankSum=-2.533;VQSLOD=2.2750;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,2:30:1.24:0,1,5	0/1:17,0:14:29.71:30,0,40	./.	./.	0/0:37,0:35:87.26:0,87,1285	1/1:45,0:45:1.18:23,1,0	0/1:37,0:23:0.04:1,0,0	0/0:90,0:48:99:0,105,1537	0/0:46,0:42:81.20:0,81,1149	0/0:74,0:60:99:0,137,2032	0/0:31,0:27:72.24:0,72,1096	0/0:43,6:46:4:0,4,40	0/1:46,6:49:99:179,0,184	0/0:48,0:48:99:0,120,1835	1/1:71,5:66:7.97:39,8,0	0/1:69,1:64:13.92:51,0,14	0/0:46,0:46:99:0,108,1585	0/1:22,1:18:66.09:66,0,75	0/0:26,0:20:45.01:0,45,599	0/0:34,0:32:90.29:0,90,1354	0/0:94,0:84:99:0,133,1955	1/1:44,4:47:2.60:12,3,0	0/1:32,2:33:0:1,0,0	0/1:25,0:21:0.01:0,0,0	0/0:39,0:39:72.22:0,72,1057	0/0:57,0:52:99:0,144,2178	0/0:31,0:29:66.08:0,66,935	0/0:4,0:4:6.02:0,6,92
chr10	51187784	.	CAT	C	379.85	PASS	AB=0.840;AC=13;AF=0.250;AN=52;BaseQRankSum=10.276;DP=1162;FS=0.617;HRun=0;HaplotypeScore=233.6811;InbreedingCoeff=0.3787;MQ=39.32;MQ0=72;MQRankSum=-9.404;QD=0.87;ReadPosRankSum=-2.528;VQSLOD=2.2324;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:29,3:30:9.28:41,9,0	0/1:13,4:14:11.93:12,0,52	./.	./.	0/0:37,0:35:81.24:0,81,1492	0/1:44,1:45:9.72:13,0,10	0/1:35,3:25:0.38:0,0,1	0/0:89,1:48:99:0,102,1688	0/0:44,0:40:75.19:0,75,1298	0/0:72,0:58:99:0,123,2255	0/0:33,0:29:65.11:0,65,1347	0/1:27,22:46:4.82:52,0,5	0/1:34,18:49:99:280,0,129	0/0:50,0:50:99:0,132,2258	1/1:48,26:64:8.93:42,9,0	1/1:40,30:64:6.40:58,6,0	0/0:47,0:47:99:0,105,1853	0/1:23,0:18:26.44:26,0,62	0/0:24,0:19:38.61:0,39,687	0/0:35,0:33:67.69:0,68,1589	0/0:95,0:84:99:0,135,2474	0/0:32,14:45:1.55:0,2,5	0/1:22,13:33:0:0,0,1	0/0:19,4:19:0:0,0,1	0/0:38,0:38:69.10:0,69,1175	0/0:57,0:52:99:0,147,2637	0/0:32,0:30:60.62:0,61,1153	0/0:4,0:4:9.01:0,9,140
chr10	51187786	.	TAC	T	135.75	PASS	AB=0.961;AC=7;AF=0.140;AN=50;BaseQRankSum=7.654;DP=1148;FS=0.852;HRun=0;HaplotypeScore=231.1997;InbreedingCoeff=0.2033;MQ=39.47;MQ0=68;MQRankSum=-7.556;QD=0.46;ReadPosRankSum=-2.012;VQSLOD=2.1193;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,5:31:5.37:0,5,15	0/1:14,2:13:10.05:10,0,46	./.	./.	0/0:35,0:33:75.26:0,75,1283	0/0:43,0:44:4.83:0,5,34	0/1:36,1:24:0:0,0,0	0/0:88,0:49:96.96:0,97,1420	0/0:43,0:39:69.21:0,69,1089	0/0:69,0:57:99:0,130,1964	0/0:32,0:28:60.03:0,60,1177	0/1:48,0:45:9.85:32,0,10	0/1:49,0:47:99:153,0,151	0/0:51,0:51:99:0,123,2043	1/1:66,8:65:2.54:32,3,0	0/1:63,4:62:17.58:20,0,18	0/0:46,0:47:89.58:0,90,1607	0/0:22,2:19:3.95:0,4,67	0/0:26,0:23:53.19:0,53,706	0/0:35,0:33:84.28:0,84,1403	0/0:94,0:83:99:0,138,2272	0/0:44,2:45:1.23:0,1,4	./.	0/0:19,2:17:0:0,0,0	0/0:39,0:39:63.12:0,63,1037	0/0:57,0:52:99:0,135,2234	0/0:32,0:30:68.82:0,69,1112	0/0:4,0:4:9.03:0,9,150
chr10	51187794	.	CAT	C	49.74	PASS	AB=0.956;AC=12;AF=0.231;AN=52;BaseQRankSum=8.472;DP=1165;FS=0.744;HRun=0;HaplotypeScore=238.3342;InbreedingCoeff=0.2467;MQ=39.73;MQ0=62;MQRankSum=-7.907;QD=0.11;ReadPosRankSum=-2.310;VQSLOD=2.1593;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:35,0:32:0.92:9,1,0	0/1:18,0:15:11.93:12,0,52	./.	./.	0/0:33,0:31:75.24:0,75,1393	0/1:38,9:47:4.83:31,0,5	0/1:33,5:25:0:0,0,0	0/0:86,0:49:99:0,114,1644	0/0:45,0:41:75.14:0,75,1152	0/0:64,0:52:99:0,113,2023	0/0:33,0:29:75.22:0,75,1327	0/1:50,0:47:4.72:5,0,12	0/1:51,1:49:31.63:32,0,183	0/0:52,0:52:99:0,138,2433	1/1:75,0:65:4.93:26,5,0	0/1:65,0:59:0.95:1,0,67	0/0:46,0:46:99:0,106,1840	0/1:24,0:19:56.03:56,0,87	0/0:28,0:26:65.99:0,66,883	0/0:39,0:37:99:0,104,1641	0/0:100,0:89:99:0,153,2600	0/0:48,1:48:1.55:0,2,5	0/1:31,2:31:0:0,0,1	0/0:20,1:17:0:0,0,1	0/0:36,0:36:68.87:0,69,1184	0/0:55,0:50:99:0,138,2422	0/0:33,0:31:75.22:0,75,1296	0/0:4,0:4:9.03:0,9,174
chr10	51187806	.	CAT	C	85.76	PASS	AB=0.975;AC=10;AF=0.192;AN=52;BaseQRankSum=8.424;DP=1157;FS=0.000;HRun=0;HaplotypeScore=228.0270;InbreedingCoeff=0.4099;MQ=39.86;MQ0=56;MQRankSum=-7.873;QD=0.30;ReadPosRankSum=-4.032;VQSLOD=1.0669;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:31,3:32:0.96:9,1,0	0/0:18,0:15:3.01:0,3,58	./.	./.	0/0:34,0:33:77.90:0,78,1340	1/1:48,0:48:7.63:69,8,0	0/0:41,0:26:1.74:0,2,17	0/0:76,0:48:99:0,125,1807	0/0:41,0:37:69.21:0,69,1137	0/0:59,0:50:99:0,104,2028	0/0:31,0:27:72.19:0,72,1237	0/0:45,1:42:2.53:0,3,34	0/1:53,3:53:67.45:67,0,250	0/0:52,0:52:99:0,135,2458	1/1:76,0:65:2.24:9,2,0	0/0:59,1:54:5.31:0,5,86	0/0:47,0:47:75.12:0,75,1739	0/1:24,0:19:34.55:35,0,91	0/0:36,0:33:88.39:0,88,1300	0/0:37,0:35:96.28:0,96,1681	0/0:99,0:88:99:0,156,2714	1/1:47,3:48:2.17:21,2,0	0/0:34,1:33:0:0,0,0	0/0:20,1:17:0:0,0,0	0/0:33,0:33:66.10:0,66,1165	0/0:58,0:52:99:0,141,2454	0/0:31,0:30:72.21:0,72,1283	0/0:4,0:4:9.03:0,9,171
chr10	51187818	.	T	TAC	612.46	PASS	AB=0.878;AC=13;AF=0.260;AN=50;BaseQRankSum=7.968;DP=1152;FS=13.545;HRun=0;HaplotypeScore=236.7308;InbreedingCoeff=0.4612;MQ=39.68;MQ0=66;MQRankSum=-7.103;QD=1.74;ReadPosRankSum=-1.272;VQSLOD=0.8651;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:33,4:33:2.17:16,2,0	0/0:14,5:16:3.01:0,3,35	./.	./.	0/0:39,0:37:81.22:0,81,1021	1/1:17,26:43:6.02:101,6,0	0/0:28,12:29:3.10:0,3,39	0/0:84,0:53:99:0,119,1456	0/0:45,0:40:58.92:0,59,905	0/0:61,0:51:87.85:0,88,1316	0/0:28,0:25:57.16:0,57,709	0/0:28,14:38:4.96:0,5,23	0/1:40,12:49:99:347,0,111	0/0:46,0:46:99:0,102,1292	1/1:39,27:56:2.45:10,2,0	1/1:37,18:48:1.48:153,1,0	0/0:40,0:42:63.17:0,63,815	0/1:24,3:22:73.36:73,0,107	0/0:44,0:38:92.03:0,92,1112	0/0:35,0:33:84.19:0,84,1040	0/0:95,0:83:99:0,124,1583	1/1:38,11:47:3:46,3,0	./.	0/1:21,2:19:0:0,0,0	0/0:35,0:35:56.77:0,57,708	0/0:58,0:53:99:0,136,1687	0/0:32,0:31:66.17:0,66,829	0/0:8,0:7:12.04:0,12,155
chr10	51187836	.	TATAC	T	105.32	PASS	AB=0.952;AC=4;AF=0.080;AN=50;BaseQRankSum=7.303;DP=1014;FS=2.135;HRun=0;HaplotypeScore=242.5983;InbreedingCoeff=0.2975;MQ=41.42;MQ0=66;MQRankSum=-6.953;QD=0.99;ReadPosRankSum=0.395;VQSLOD=2.7664;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,5:33:8.80:0,9,44	./.	./.	./.	0/0:35,0:33:84.27:0,84,2114	0/0:44,0:44:21:0,21,433	0/0:37,1:27:22.12:0,22,521	0/0:94,0:61:99:0,149,3257	0/0:45,0:40:87.25:0,87,2232	0/0:51,0:44:92.78:0,93,2605	0/0:23,0:21:48.14:0,48,1111	0/0:28,0:26:4.07:0,4,14	0/1:43,1:43:99:119,0,166	0/0:37,0:37:99:0,99,2531	0/0:45,8:47:5.29:0,5,24	1/1:31,6:32:9.97:59,10,0	0/0:29,0:30:10.89:0,11,1415	0/1:23,2:20:32.66:33,0,111	0/0:40,0:30:81.12:0,81,1614	0/0:28,0:27:78.21:0,78,1898	0/0:79,1:70:99:0,138,3374	0/0:42,0:41:3:0,3,30	0/0:28,0:27:3.01:0,3,36	0/0:19,0:16:0:0,0,1	0/0:37,0:37:71.78:0,72,1650	0/0:51,0:47:99:0,129,3192	0/0:31,0:30:67.39:0,67,1970	0/0:6,0:5:9.03:0,9,208
chr10	51187838	.	TAC	T	80.06	PASS	AB=0.862;AC=6;AF=0.115;AN=52;BaseQRankSum=7.434;DP=1010;FS=9.163;HRun=0;HaplotypeScore=214.2447;InbreedingCoeff=0.4085;MQ=41.74;MQ0=66;MQRankSum=-6.433;QD=0.62;ReadPosRankSum=0.138;VQSLOD=1.4445;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,1:34:3.03:0,3,47	0/0:10,4:12:0:0,0,0	./.	./.	0/0:35,0:34:84.20:0,84,1297	0/0:42,0:42:21.06:0,21,326	0/0:35,2:26:22.55:0,23,365	0/0:95,0:59:99:0,119,1793	0/0:46,0:41:84.23:0,84,1363	0/0:51,0:44:74.03:0,74,1549	0/0:24,0:22:22.89:0,23,637	1/1:20,7:25:2.90:16,3,0	0/1:35,8:43:83:107,0,83	0/0:36,0:36:93.28:0,93,1498	0/0:44,12:49:4.63:0,5,20	1/1:29,8:32:7.91:50,8,0	0/0:28,0:29:25.46:0,25,842	0/1:19,3:18:20.34:20,0,118	0/0:39,0:29:63.09:0,63,914	0/0:27,0:26:72.15:0,72,1115	0/0:82,0:72:99:0,126,1995	0/0:31,9:39:1.24:0,1,3	0/0:22,6:28:3:0,3,32	0/0:15,2:14:0:0,0,0	0/0:35,0:35:49.98:0,50,889	0/0:54,0:50:99:0,129,1984	0/0:33,0:32:54.72:0,55,1225	0/0:6,0:5:9.03:0,9,142
chr10	51187850	.	TACACACACATACAC	T	707.76	PASS	AB=0.937;AC=12;AF=0.214;AN=56;BaseQRankSum=6.772;DP=997;FS=1.865;HRun=0;HaplotypeScore=333.4275;InbreedingCoeff=0.4507;MQ=43.34;MQ0=58;MQRankSum=-6.531;QD=2.62;ReadPosRankSum=-0.687;VQSLOD=1.9267;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:43,0:39:32.28:65,0,32	1/1:10,5:13:3.01:37,3,0	0/0:12,0:3:9.03:0,9,179	0/0:18,0:5:14.94:0,15,281	0/0:38,0:37:81.23:0,81,3485	0/0:46,0:46:31.74:0,32,385	0/0:31,0:27:20.93:0,21,540	0/0:83,0:50:94.79:0,95,3056	0/0:39,0:36:85.52:0,86,4432	0/0:49,0:44:95.82:0,96,4206	0/0:24,0:23:51.17:0,51,2293	0/0:19,8:25:2.77:0,3,17	1/1:26,13:39:25.65:459,26,0	0/0:36,0:36:87.30:0,87,4721	0/1:48,2:45:0.05:0,0,1	0/1:33,0:31:9.70:49,0,10	0/0:31,0:30:66.18:0,66,2691	0/1:15,6:18:70.08:217,0,70	0/0:32,0:23:54.18:0,54,2650	0/0:25,0:24:66.21:0,66,3127	0/0:75,0:67:99:0,105,5255	1/1:19,17:36:2.26:17,2,0	1/1:18,12:30:0.47:1,0,0	0/0:16,1:14:0.47:0,0,1	0/0:34,0:34:59.58:0,60,3076	0/0:52,0:49:99:0,111,5144	0/0:38,0:38:99:0,99,4145	0/0:13,0:12:27.09:0,27,947
chr10	51187858	.	CAT	C	318.41	PASS	AB=0.943;AC=14;AF=0.259;AN=54;BaseQRankSum=8.438;DP=967;FS=2.302;HRun=0;HaplotypeScore=196.0668;InbreedingCoeff=0.5260;MQ=44.09;MQ0=51;MQRankSum=-5.486;QD=1.33;ReadPosRankSum=-1.139;VQSLOD=2.6297;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:43,1:39:12.50:20,0,13	1/1:11,4:13:2.95:19,3,0	0/0:26,0:9:13.19:0,13,190	0/1:22,1:9:6.45:6,0,133	0/0:37,0:36:76.70:0,77,1305	0/0:41,0:41:24.12:0,24,90	0/0:34,0:27:21.72:0,22,230	0/0:70,0:43:81.50:0,82,1351	0/0:39,0:36:90.20:0,90,1488	0/0:46,0:40:86.13:0,86,1533	0/0:24,0:24:44.70:0,45,942	1/1:19,5:23:0.47:2,0,0	1/1:29,7:36:15.99:202,16,0	0/0:36,0:36:88.46:0,88,1597	0/0:38,11:43:0.75:0,1,2	1/1:24,8:29:7.49:97,7,0	0/0:34,0:33:65.44:0,65,1038	0/1:15,2:14:21.70:101,0,22	0/0:31,0:23:50.90:0,51,945	0/0:24,0:23:34.61:0,35,940	0/0:70,0:64:99:0,117,1871	1/1:27,5:32:2.90:16,3,0	./.	0/1:15,1:13:0:0,0,0	0/0:30,0:30:38.60:0,39,1088	0/0:50,0:47:99:0,131,1933	0/0:38,0:37:99:0,108,1684	0/0:18,0:18:41.97:0,42,553
chr10	51187860	.	TACAC	T	1054.23	PASS	AB=0.950;AC=14;AF=0.269;AN=52;BaseQRankSum=7.242;DP=950;FS=4.622;HRun=0;HaplotypeScore=210.7482;InbreedingCoeff=0.6288;MQ=45.22;MQ0=44;MQRankSum=-2.472;QD=3.98;ReadPosRankSum=0.094;VQSLOD=2.5198;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:42,1:39:9.70:0,10,41	1/1:15,0:13:2.90:37,3,0	0/0:30,0:12:17.10:0,17,486	0/0:24,0:9:26.52:0,27,345	0/0:32,0:33:75.03:0,75,1684	1/1:10,31:42:29.70:486,30,0	0/1:24,8:25:99:184,0,138	0/0:70,0:42:78.67:0,79,1604	0/0:37,0:36:78.27:0,78,1892	0/0:49,0:43:99:0,106,2097	0/0:20,0:21:56.98:0,57,1318	./.	1/1:35,0:35:11.90:233,12,0	0/0:36,0:36:96.30:0,96,2145	0/1:48,0:42:0.13:0,0,0	1/1:32,0:30:8.95:131,9,0	0/0:33,0:32:47:0,47,1227	0/1:17,0:14:57.31:115,0,57	0/0:30,0:23:65.68:0,66,1356	0/0:23,0:22:50.85:0,51,1135	0/0:67,0:63:99:0,104,2442	./.	0/1:28,0:28:0:0,0,0	1/1:16,0:13:2.65:24,3,0	0/0:29,0:30:62.59:0,63,1474	0/0:46,0:44:99:0,105,2397	0/0:38,0:38:98.35:0,98,2177	0/0:17,1:18:45.13:0,45,934
chr10	51192251	.	T	TA	11313.07	PASS	AB=0.941;AC=25;AF=0.446;AN=56;BaseQRankSum=-17.119;DP=651;FS=8.534;HRun=1;HaplotypeScore=55.3950;InbreedingCoeff=0.9523;MQ=84.86;MQ0=0;MQRankSum=-1.752;QD=39.28;ReadPosRankSum=3.408;VQSLOD=5.1908;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,29:29:75.25:1123,75,0	1/1:0,16:16:42.14:629,42,0	0/0:25,0:25:75.24:0,75,968	0/0:15,0:15:42.07:0,42,505	0/0:38,0:38:99:0,114,1453	1/1:0,29:29:84.28:1258,84,0	1/1:0,19:19:48.16:719,48,0	0/0:32,0:32:90.28:0,90,1156	0/0:21,0:21:63.20:0,63,817	0/0:24,0:24:69.22:0,69,896	0/0:22,0:22:63.19:0,63,804	1/1:0,24:24:66.22:989,66,0	1/1:3,21:24:60.20:891,60,0	0/1:15,1:16:2.83:3,0,464	1/1:0,25:25:72.24:1079,72,0	1/1:0,17:17:48.16:719,48,0	0/0:19,0:19:57.19:0,57,739	1/1:1,25:26:75.25:1118,75,0	0/0:27,0:27:81.23:0,81,1012	0/0:33,0:33:99:0,99,1270	0/0:14,0:14:42.14:0,42,545	1/1:0,29:29:84.28:1258,84,0	1/1:0,19:19:57.19:853,57,0	1/1:0,15:15:45.15:673,45,0	0/0:20,0:20:60.19:0,60,768	0/0:31,0:31:93.29:0,93,1194	0/0:28,0:28:72.18:0,72,902	0/0:14,0:14:33.11:0,33,428
chr10	51192693	.	AC	A	9051.08	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=14.951;DP=718;FS=3.364;HRun=1;HaplotypeScore=68.2676;InbreedingCoeff=0.9998;MQ=83.63;MQ0=0;MQRankSum=-1.379;QD=37.09;ReadPosRankSum=4.507;VQSLOD=5.3408;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,44:44:99:1760,126,0	1/1:0,18:18:51.17:712,51,0	0/0:26,0:26:68.48:0,68,1114	0/0:17,0:18:47.97:0,48,669	0/0:36,0:36:99:0,108,1588	0/0:29,0:29:87.30:0,87,1387	0/0:18,0:18:54.12:0,54,811	0/0:28,0:28:81.24:0,81,1208	0/0:22,0:22:66.23:0,66,1051	0/0:33,0:33:96.32:0,96,1515	0/0:15,0:15:45.15:0,45,707	1/1:0,26:26:66.22:922,66,0	1/1:0,28:28:63.21:879,63,0	0/0:28,0:28:84.26:0,84,1316	1/1:0,37:37:87.29:1216,87,0	1/1:0,19:19:54.18:755,54,0	0/0:31,0:31:93.23:0,93,1407	1/1:0,9:9:27.09:377,27,0	0/0:14,0:14:42.10:0,42,620	0/0:37,0:37:99:0,111,1749	0/0:22,0:22:66.13:0,66,953	1/1:0,17:17:51.17:713,51,0	1/1:0,31:31:84.28:1173,84,0	1/1:0,15:15:39.13:545,39,0	0/0:26,0:26:78.25:0,78,1221	0/0:42,0:42:99:0,123,1892	0/0:35,0:35:99:0,105,1592	0/0:14,0:14:42.14:0,42,671
chr10	51193064	.	C	CT	3937.98	PASS	AB=0.655;AC=42;AF=0.750;AN=56;BaseQRankSum=-4.093;DP=622;FS=19.097;HRun=13;HaplotypeScore=86.6503;InbreedingCoeff=0.2092;MQ=71.91;MQ0=0;MQRankSum=0.009;QD=7.29;ReadPosRankSum=0.449;VQSLOD=0.7907;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,1:38:46.02:0,46,400	1/1:9,10:20:14.41:117,14,0	0/0:19,1:20:0.09:0,0,102	0/1:19,0:15:1.14:1,0,45	0/0:22,0:22:47.75:0,48,300	1/1:2,1:21:22.73:115,23,0	1/1:6,2:20:15.23:78,15,0	1/1:11,3:18:13.09:97,13,0	1/1:5,11:16:9.47:81,9,0	1/1:14,7:21:7.96:198,8,0	1/1:5,13:19:13.87:223,14,0	0/1:7,12:19:5.14:88,0,5	1/1:15,5:20:35.39:273,35,0	1/1:26,5:31:42.21:315,42,0	1/1:11,19:30:17.89:148,18,0	0/1:8,16:24:3.47:121,0,3	0/1:9,18:28:12.41:68,0,12	0/1:5,8:13:8.57:72,0,9	0/1:12,11:23:14.04:261,0,14	1/1:17,5:24:4.08:185,4,0	1/1:4,15:19:9.53:230,10,0	1/1:0,13:13:11.91:90,12,0	1/1:6,25:32:44.71:371,45,0	1/1:3,10:13:12.01:111,12,0	0/1:4,13:19:2.86:94,0,3	1/1:11,19:30:0.52:318,1,0	0/1:6,21:27:5:120,0,5	1/1:10,10:21:3.30:161,3,0
chr10	51194210	.	CA	C	5998.90	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=12.079;DP=515;FS=17.208;HRun=1;HaplotypeScore=50.5108;InbreedingCoeff=0.9991;MQ=80.31;MQ0=0;MQRankSum=-0.287;QD=33.51;ReadPosRankSum=2.839;VQSLOD=3.0834;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,21:22:54.18:748,54,0	1/1:0,12:12:27.09:364,27,0	0/0:13,0:13:36.07:0,36,488	0/0:12,0:12:26.23:0,26,405	0/0:24,0:24:69.18:0,69,1005	0/0:20,0:20:60.16:0,60,884	0/0:17,0:17:51.15:0,51,766	0/0:33,0:33:99:0,99,1460	0/0:11,0:11:33.10:0,33,500	0/0:17,0:17:51.17:0,51,795	0/0:16,0:16:48.16:0,48,754	1/1:0,11:11:24.08:333,24,0	1/1:0,26:26:60.20:832,60,0	0/0:19,0:19:57.18:0,57,875	1/1:0,18:18:42.14:584,42,0	1/1:0,19:19:41.50:550,42,0	0/0:29,0:29:87.27:0,87,1340	1/1:0,18:18:48.16:664,48,0	0/0:14,0:14:42.13:0,42,622	0/0:14,0:14:42.14:0,42,670	0/0:13,0:13:39.12:0,39,598	1/1:0,10:10:27.09:367,27,0	1/1:0,27:27:72.20:974,72,0	1/1:0,16:16:42.14:584,42,0	0/0:19,0:19:57.18:0,57,882	0/0:24,0:24:72.24:0,72,1129	0/0:30,0:29:90.27:0,90,1377	0/0:11,0:11:33.11:0,33,526
chr10	51194342	.	C	CTG	8755.34	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-14.087;DP=518;FS=8.447;HRun=0;HaplotypeScore=56.2951;InbreedingCoeff=0.9798;MQ=77.14;MQ0=2;MQRankSum=0.619;QD=45.84;ReadPosRankSum=2.764;VQSLOD=6.0958;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,18:19:54.19:989,54,0	1/1:1,3:4:6.02:110,6,0	0/0:11,0:11:26.87:0,27,320	0/0:10,0:10:20.57:0,21,253	0/0:25,0:25:66.20:0,66,923	1/1:2,16:18:42.14:770,42,0	1/1:0,7:7:15.05:275,15,0	0/0:29,0:29:81.27:0,81,1161	0/0:16,0:16:48.15:0,48,668	0/0:34,0:34:99:0,99,1403	0/0:18,0:18:54.17:0,54,756	1/1:1,20:21:57.20:1044,57,0	1/1:0,32:32:84.29:1539,84,0	0/0:25,0:25:69.22:0,69,969	1/1:1,20:22:48.16:880,48,0	1/1:1,24:26:29.25:1222,29,0	0/0:31,0:31:93.30:0,93,1314	1/1:0,10:10:30.10:550,30,0	0/0:13,0:13:39.10:0,39,522	0/0:20,0:20:57.16:0,57,780	0/0:13,0:13:33.11:0,33,472	1/1:0,6:7:18.06:330,18,0	1/1:0,8:8:18.06:330,18,0	1/1:1,14:15:39.13:715,39,0	0/0:10,0:10:30.10:0,30,429	0/0:25,0:25:72.24:0,72,1032	0/0:29,0:29:81.24:0,81,1122	0/0:18,0:18:41.81:0,42,570
chr10	51194515	.	T	TA	882.45	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-8.228;DP=606;FS=13.570;HRun=8;HaplotypeScore=61.1249;InbreedingCoeff=0.9913;MQ=78.86;MQ0=0;MQRankSum=-0.268;QD=25.21;ReadPosRankSum=-0.239;VQSLOD=3.1301;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:63.03:0,63,576	0/0:14,0:14:42.02:0,42,384	0/0:20,0:20:45.01:0,45,409	0/0:17,0:17:16.39:0,16,272	0/0:29,0:29:75:0,75,676	1/1:1,15:16:42.12:485,42,0	1/1:0,19:19:45.13:519,45,0	0/0:29,0:29:75.01:0,75,682	0/0:17,0:17:51.03:0,51,466	0/0:30,0:30:84.02:0,84,765	0/0:28,0:28:75.04:0,75,686	0/0:20,0:20:54:0,54,489	0/0:26,0:26:75.02:0,75,681	0/0:28,0:28:75.04:0,75,686	0/0:10,0:10:23.99:0,24,215	0/0:14,0:14:42:0,42,379	0/0:13,0:13:29.99:0,30,268	0/0:26,0:26:75.04:0,75,686	0/0:19,0:19:45.01:0,45,408	0/0:30,0:30:75.02:0,75,686	0/0:11,0:11:27.01:0,27,247	0/0:24,0:24:69.04:0,69,630	0/0:39,0:39:99:0,105,955	0/0:16,0:16:45.02:0,45,412	0/0:27,0:27:78.04:0,78,714	0/0:27,0:27:39.36:0,39,526	0/0:23,0:23:66.02:0,66,599	0/0:13,0:13:25.86:0,26,317
chr10	51194812	.	ATGTGTGTGTT	A	4783.38	PASS	AB=0.789;AC=20;AF=0.357;AN=56;BaseQRankSum=8.780;DP=766;FS=29.082;HRun=0;HaplotypeScore=194.7184;InbreedingCoeff=0.5581;MQ=58.05;MQ0=12;MQRankSum=-6.823;QD=16.61;ReadPosRankSum=4.887;VQSLOD=2.4888;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:4,14:18:3.21:222,3,0	1/1:2,9:11:14.62:388,15,0	0/0:47,0:21:36.06:0,36,489	0/0:47,0:26:47.09:0,47,669	0/0:29,0:29:84.27:0,84,2943	0/1:2,0:32:51.88:52,0,1387	0/1:4,0:27:5.93:6,0,1088	0/0:55,0:55:99:0,138,2960	0/0:24,0:24:63.21:0,63,1919	0/0:26,0:26:75.26:0,75,2770	0/0:26,0:26:72.25:0,72,2944	0/1:5,14:19:3.83:449,0,4	1/1:3,23:26:25.33:822,25,0	0/1:16,0:16:49.02:49,0,1722	1/1:1,17:18:15.05:467,15,0	1/1:1,24:26:17.72:513,18,0	0/0:19,0:19:48.15:0,48,1385	0/1:4,14:19:28.48:94,0,28	0/0:21,0:19:39.13:0,39,1126	0/0:26,0:26:72.23:0,72,2837	0/0:58,0:58:99:0,150,5037	1/1:2,16:18:33.01:813,33,0	1/1:2,27:29:20.71:580,21,0	0/1:7,21:28:4.86:328,0,5	0/0:18,0:18:54.15:0,54,1367	0/0:44,0:44:99:0,111,3525	0/0:23,0:23:63.21:0,63,2062	0/0:15,0:15:36.07:0,36,1108
chr10	51195189	.	A	AT	7931.14	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-16.466;DP=640;FS=3.136;HRun=8;HaplotypeScore=56.7975;InbreedingCoeff=0.9962;MQ=81.50;MQ0=0;MQRankSum=-0.795;QD=28.53;ReadPosRankSum=2.492;VQSLOD=5.4201;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,27:31:72.21:831,72,0	1/1:0,8:8:24.07:277,24,0	0/0:25,0:25:35.47:0,35,337	0/0:14,0:14:29.98:0,30,266	0/0:33,0:33:90.03:0,90,819	1/1:1,23:24:63.19:727,63,0	1/1:4,23:27:63.19:727,63,0	0/0:32,0:32:78.02:0,78,711	0/0:19,0:19:51.01:0,51,459	0/0:33,0:33:87.01:0,87,788	0/0:18,0:18:54.03:0,54,494	1/1:3,26:29:69.21:797,69,0	1/1:2,29:31:88.50:1007,89,0	0/0:16,0:17:44.05:0,44,390	1/1:3,28:31:75.22:866,75,0	1/1:1,28:29:69.20:796,69,0	0/0:16,0:16:47.98:0,48,428	1/1:2,16:18:45.13:519,45,0	0/0:22,0:22:48.02:0,48,439	0/0:22,0:22:60.01:0,60,544	0/0:8,0:8:17.99:0,18,159	1/1:1,15:16:36.11:415,36,0	1/1:1,16:17:48.14:554,48,0	1/1:1,16:17:36.11:415,36,0	0/0:30,0:30:87:0,87,781	0/0:28,0:28:84.05:0,84,769	0/0:39,0:39:99:0,105,956	0/0:6,0:6:15.01:0,15,137
chr10	51196588	.	TGATA	T	571.96	PASS	AB=0.828;AC=8;AF=0.160;AN=50;BaseQRankSum=3.857;DP=639;FS=7.898;HRun=0;HaplotypeScore=134.0085;InbreedingCoeff=0.4882;MQ=59.30;MQ0=25;MQRankSum=2.136;QD=4.77;ReadPosRankSum=-1.918;VQSLOD=1.4694;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:28:1.44:0,1,4	./.	./.	./.	1/1:25,18:41:8.73:60,9,0	0/0:16,0:14:1.18:0,1,3	0/0:9,0:8:5.99:0,6,50	0/0:46,0:43:8.92:0,9,70	0/0:19,0:19:39.12:0,39,617	0/0:33,0:32:15.03:0,15,213	0/1:10,11:21:0:0,0,0	0/0:15,0:15:5.09:0,5,25	0/0:24,0:23:4.29:0,4,28	0/0:18,0:16:36.11:0,36,569	0/0:20,0:19:2.94:0,3,25	0/0:20,0:20:1.83:0,2,4	0/0:23,0:22:2.84:0,3,20	0/1:25,0:22:15.64:16,0,20	0/0:15,0:15:18.05:0,18,292	0/0:36,0:34:51.15:0,51,786	0/0:15,0:14:24.08:0,24,387	0/0:18,0:18:5.67:0,6,29	0/0:30,0:26:20.38:0,20,116	0/0:14,0:13:2.68:0,3,11	0/0:35,0:33:2.12:0,2,8	1/1:9,11:20:32.87:385,33,0	0/0:34,0:31:66.16:0,66,1005	1/1:11,0:10:20.02:242,20,0
chr10	51196635	.	TAGG	T	151.11	PASS	AB=1.000;AC=8;AF=0.154;AN=52;BaseQRankSum=3.872;DP=571;FS=21.546;HRun=0;HaplotypeScore=155.3504;InbreedingCoeff=0.5833;MQ=48.94;MQ0=40;MQRankSum=-1.822;QD=2.32;ReadPosRankSum=-4.067;VQSLOD=-0.5479;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:23:7.09:7,0,146	0/0:6,0:6:17.44:0,17,104	./.	./.	0/0:42,0:38:57.15:0,57,1116	0/0:11,0:10:17.07:0,17,100	0/0:8,0:6:11.39:0,11,65	0/0:47,0:42:99:0,126,2100	0/0:19,0:16:45.15:0,45,920	0/0:23,0:20:53.49:0,53,563	0/0:27,0:26:26.53:0,27,206	0/0:8,0:8:1.09:0,1,42	0/0:17,0:17:5.86:0,6,143	0/0:22,0:20:54.19:0,54,1132	0/0:22,0:20:43.67:0,44,246	0/1:9,0:8:4.86:5,0,23	0/0:28,0:25:52.09:0,52,292	0/0:28,0:22:14.84:0,15,163	0/0:19,0:17:49.90:0,50,760	0/0:40,0:38:91.51:0,92,1303	0/0:18,0:17:44.04:0,44,604	1/1:3,2:5:8.92:94,9,0	1/1:2,16:14:8.95:97,9,0	1/1:6,3:8:5.81:75,6,0	0/0:37,0:34:80.39:0,80,600	0/0:28,0:28:74.68:0,75,1189	0/0:37,0:34:95.35:0,95,1489	0/0:16,0:15:40.77:0,41,297
chr10	51196636	.	A	AT	321.53	PASS	AB=0.847;AC=7;AF=0.135;AN=52;BaseQRankSum=5.383;DP=567;FS=2.778;HRun=1;HaplotypeScore=136.7606;InbreedingCoeff=0.0106;MQ=49.00;MQ0=40;MQRankSum=-3.432;QD=3.57;ReadPosRankSum=-2.274;VQSLOD=-0.5479;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:22:29.41:0,29,335	0/0:6,0:6:17.82:0,18,185	./.	./.	0/0:42,0:38:54.18:0,54,754	0/1:8,3:10:56.54:57,0,106	0/0:7,0:5:9.01:0,9,94	0/0:47,0:42:99:0,126,1698	0/0:19,0:16:45.14:0,45,612	0/0:24,0:21:51.13:0,51,668	0/0:27,0:26:26.21:0,26,341	0/1:6,3:9:13.46:48,0,13	0/1:16,3:17:99:126,0,100	0/0:22,0:20:54.17:0,54,738	0/0:21,0:19:43.58:0,44,433	0/1:6,2:8:26.93:83,0,27	0/0:27,0:24:54.17:0,54,690	0/1:21,6:21:99:112,0,116	0/0:19,0:17:51.16:0,51,673	0/0:39,0:37:92.13:0,92,1151	0/0:18,0:17:45.13:0,45,573	0/1:5,0:5:3.29:15,0,3	0/0:18,0:14:1.62:0,2,6	0/1:9,0:8:4.95:5,0,6	0/0:38,0:35:84.21:0,84,1054	0/0:28,0:28:72.08:0,72,877	0/0:36,0:33:93.77:0,94,1234	0/0:16,0:15:42.11:0,42,484
chr10	51196638	.	GTAGA	G	735.51	PASS	AB=1.000;AC=6;AF=0.120;AN=50;BaseQRankSum=1.374;DP=572;FS=0.000;HRun=0;HaplotypeScore=161.5836;InbreedingCoeff=0.2827;MQ=49.01;MQ0=39;MQRankSum=3.232;QD=7.66;ReadPosRankSum=0.187;VQSLOD=2.7474;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:23:5.22:0,5,41	0/0:6,0:6:0.47:0,0,1	./.	./.	0/0:42,0:38:57.17:0,57,893	0/0:12,0:10:1.55:0,2,4	0/0:8,0:6:3.19:0,3,25	0/0:48,0:44:11.87:0,12,83	0/0:18,0:15:6.02:0,6,101	1/1:9,14:20:42.09:547,42,0	0/1:27,0:26:25.57:279,0,26	0/0:9,0:9:1.22:0,1,3	0/0:21,0:19:6.73:0,7,34	0/0:22,0:20:21.07:0,21,347	1/1:20,0:18:1.09:3,1,0	0/0:11,0:10:8.49:0,8,58	0/0:27,0:24:4.71:0,5,22	0/1:26,0:20:15.01:15,0,41	0/0:19,0:17:9.01:0,9,97	0/0:39,0:37:9.72:0,10,79	0/0:19,0:18:3.73:0,4,27	0/0:6,0:6:3.81:0,4,20	./.	0/0:8,0:7:0.89:0,1,2	0/0:38,0:35:8.89:0,9,193	0/0:28,0:28:45.15:0,45,779	0/0:37,0:34:5.96:0,6,50	0/0:16,0:15:14.38:0,14,101
chr10	51196646	.	A	AC	176.12	PASS	AB=0.835;AC=7;AF=0.135;AN=52;BaseQRankSum=5.502;DP=544;FS=30.537;HRun=0;HaplotypeScore=124.3682;InbreedingCoeff=-0.1533;MQ=48.57;MQ0=40;MQRankSum=-3.134;QD=1.74;ReadPosRankSum=-2.888;VQSLOD=0.5535;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:20,0:19:16.90:17,0,242	0/1:6,0:6:8.18:8,0,57	./.	./.	0/0:41,0:37:60.18:0,60,839	0/1:8,3:9:5.48:5,0,96	0/0:7,0:5:12.04:0,12,168	0/0:48,0:42:99:0,120,1622	0/0:15,0:12:33.09:0,33,442	0/0:25,0:22:56.67:0,57,535	0/0:25,0:24:28.75:0,29,236	0/1:5,5:10:32.81:86,0,33	0/1:14,6:18:98.22:98,0,340	0/0:20,0:18:48.16:0,48,671	0/0:19,0:17:12.04:0,12,329	0/1:5,3:7:73.78:74,0,149	0/0:27,0:24:54.18:0,54,753	0/1:23,2:20:6.83:7,0,282	0/0:17,0:14:42.14:0,42,569	0/0:35,0:33:80.86:0,81,1116	0/0:19,0:18:45.15:0,45,617	0/0:6,1:7:15.04:0,15,193	0/0:6,10:12:9.01:0,9,126	0/0:5,3:7:6.02:0,6,84	0/0:38,0:35:87.19:0,87,1149	0/0:22,0:22:66.22:0,66,917	0/0:38,0:35:96.79:0,97,1327	0/0:15,0:15:42.14:0,42,578
chr10	51196650	.	A	AC	149.41	PASS	AB=0.894;AC=6;AF=0.111;AN=54;BaseQRankSum=5.156;DP=542;FS=33.268;HRun=0;HaplotypeScore=117.2394;InbreedingCoeff=-0.1417;MQ=48.37;MQ0=41;MQRankSum=-2.799;QD=1.84;ReadPosRankSum=-4.109;VQSLOD=-0.6876;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:15,0:17:51.31:51,0,108	0/1:2,4:6:71.70:80,0,72	0/0:3,0:2:3.01:0,3,42	./.	0/0:40,0:36:63.20:0,63,881	0/0:12,0:10:15.05:0,15,208	0/0:6,0:4:12.04:0,12,168	0/0:48,0:42:99:0,120,1603	0/0:12,0:9:24.08:0,24,336	0/0:25,0:22:65.69:0,66,645	0/0:24,0:23:28.77:0,29,253	0/1:10,0:10:57.60:58,0,72	0/1:20,0:18:24.71:25,0,344	0/0:20,0:18:48.15:0,48,652	0/1:17,2:17:13.03:13,0,308	0/1:8,0:7:44.85:45,0,149	0/0:26,0:23:51.17:0,51,711	0/0:26,0:20:12.64:0,13,375	0/0:16,0:13:39.13:0,39,540	0/0:33,0:32:77.82:0,78,1041	0/0:20,0:19:51.14:0,51,666	0/0:8,0:8:18.06:0,18,251	0/0:17,0:14:12.01:0,12,150	0/0:9,0:8:6.02:0,6,84	0/0:39,0:36:90.28:0,90,1204	0/0:23,0:23:64.60:0,65,857	0/0:34,0:31:87.74:0,88,1172	0/0:15,0:15:41.63:0,42,556
chr10	51197327	.	T	TAA	4841.10	PASS	AB=0.747;AC=20;AF=0.357;AN=56;BaseQRankSum=-12.465;DP=497;FS=11.343;HRun=9;HaplotypeScore=60.0788;InbreedingCoeff=0.8727;MQ=80.27;MQ0=0;MQRankSum=-0.671;QD=28.48;ReadPosRankSum=1.843;VQSLOD=3.5853;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,23:26:57.19:858,57,0	1/1:2,4:6:12.04:173,12,0	0/1:16,0:17:1.77:2,0,139	0/0:19,0:16:22.85:0,23,196	0/0:29,0:29:75.17:0,75,798	0/0:15,0:14:45.08:0,45,462	0/0:18,0:18:25.56:0,26,456	0/0:30,0:30:72.08:0,72,754	0/0:14,0:14:36.08:0,36,383	0/0:26,0:26:69.08:0,69,710	0/0:19,0:19:48.09:0,48,502	1/1:2,12:14:27.09:415,27,0	1/1:2,16:18:36.12:553,36,0	0/0:10,0:10:21.05:0,21,223	1/1:1,21:23:51.17:784,51,0	1/1:2,15:17:33.11:507,33,0	0/0:31,0:31:78.16:0,78,821	1/1:1,15:16:42.14:646,42,0	0/0:17,0:17:42.06:0,42,436	0/0:27,0:27:69.13:0,69,726	0/0:6,0:6:12.02:0,12,128	0/1:2,9:11:4.74:304,0,5	1/1:1,14:15:30.02:461,30,0	1/1:3,4:7:9.03:138,9,0	0/0:19,0:19:57.12:0,57,597	0/0:25,0:25:60.02:0,60,638	0/0:16,0:16:48.12:0,48,511	0/0:6,0:6:15.03:0,15,160
chr10	51198558	.	AAGAG	A	843.43	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.750;DP=679;FS=9.635;HRun=0;HaplotypeScore=103.2589;InbreedingCoeff=0.9965;MQ=61.32;MQ0=8;MQRankSum=-1.787;QD=22.20;ReadPosRankSum=-0.907;VQSLOD=2.7481;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:81.75:0,82,2047	0/0:9,0:9:24.08:0,24,612	0/0:49,0:23:54.15:0,54,1189	0/0:70,0:27:44.12:0,44,744	0/0:40,0:40:99:0,114,2710	1/1:3,20:23:33.11:580,33,0	1/1:5,10:15:23.87:384,24,0	0/0:33,0:33:87:0,87,1967	0/0:23,0:23:57.18:0,57,1401	0/0:26,0:26:78.27:0,78,2000	0/0:22,0:22:60.19:0,60,1384	0/0:11,0:11:27.09:0,27,622	0/0:16,0:16:45.12:0,45,1001	0/0:17,0:17:42.13:0,42,935	0/0:21,0:21:54.17:0,54,1289	0/0:22,0:22:60.21:0,60,1531	0/0:18,0:18:35.91:0,36,1066	0/0:35,0:35:97.95:0,98,2343	0/0:13,0:13:30.10:0,30,721	0/0:22,0:22:60.21:0,60,1479	0/0:15,0:16:41.93:0,42,1013	0/0:25,0:25:63.18:0,63,1432	0/0:16,0:16:45.12:0,45,1049	0/0:20,0:20:45.15:0,45,1049	0/0:26,0:26:66.23:0,66,1686	0/0:13,0:13:30.10:0,30,742	0/0:23,0:23:63.18:0,63,1434	0/0:22,0:22:63.06:0,63,1341
chr10	51200767	.	CTT	C	3941.53	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=12.307;DP=547;FS=6.271;HRun=10;HaplotypeScore=83.0564;InbreedingCoeff=0.9358;MQ=65.68;MQ0=17;MQRankSum=-10.718;QD=26.45;ReadPosRankSum=4.029;VQSLOD=3.6572;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,9:11:24.06:267,24,0	1/1:0,9:9:27.07:301,27,0	0/0:48,0:18:26.38:0,26,333	0/0:27,1:13:0.52:0,1,91	0/0:19,0:19:39.12:0,39,596	0/0:20,0:20:48.16:0,48,750	0/0:15,0:15:30.10:0,30,473	0/0:38,0:37:81.21:0,81,1189	0/0:14,0:14:26.96:0,27,396	0/0:26,0:26:66.09:0,66,909	0/0:23,0:24:65.19:0,65,948	1/1:2,17:18:3.51:487,4,0	1/1:4,9:13:31.61:329,32,0	0/0:16,0:16:45.14:0,45,680	1/1:4,16:17:45.12:501,45,0	1/1:2,22:24:66.16:735,66,0	0/0:19,0:19:47.85:0,48,699	1/1:1,12:12:33.08:363,33,0	0/0:17,0:19:38.10:0,38,539	0/0:23,0:23:63.14:0,63,909	0/0:9,0:9:27.09:0,27,429	1/1:4,10:13:36.08:392,36,0	1/1:5,11:16:36.09:400,36,0	1/1:4,5:7:15.04:167,15,0	0/0:18,0:19:54.18:0,54,824	0/0:21,0:21:57.19:0,57,885	0/0:30,0:30:69.20:0,69,1042	0/0:9,0:9:24.02:0,24,308
chr10	51200781	.	GTT	G	3032.86	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=12.330;DP=547;FS=4.323;HRun=12;HaplotypeScore=89.1381;InbreedingCoeff=0.9800;MQ=63.47;MQ0=23;MQRankSum=-11.505;QD=20.09;ReadPosRankSum=6.576;VQSLOD=3.0599;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,9:12:27.04:274,27,0	1/1:1,7:12:23:239,23,0	0/0:53,0:14:9.22:0,9,104	0/0:34,0:16:21.70:0,22,248	0/0:18,0:19:50.49:0,50,632	0/0:3,0:18:32.19:0,32,113	0/0:5,0:12:20.83:0,21,114	0/0:32,0:31:61.02:0,61,800	0/0:12,0:12:30.03:0,30,367	0/0:22,0:22:53.90:0,54,699	0/0:26,0:29:65.07:0,65,799	1/1:9,10:17:11.97:317,12,0	1/1:3,10:14:29.73:276,30,0	0/0:15,0:16:45.70:0,46,473	1/1:6,14:17:44.91:440,45,0	1/1:5,16:22:56.85:559,57,0	0/0:21,0:21:44.72:0,45,470	1/1:7,7:13:33.03:325,33,0	0/0:18,0:17:36.09:0,36,471	0/0:18,0:20:49.64:0,50,610	0/0:10,0:10:27.08:0,27,371	1/1:2,10:11:30.06:304,30,0	1/1:1,14:15:39.08:396,39,0	1/1:3,5:7:12.02:121,12,0	0/0:18,0:19:44.65:0,45,509	0/0:16,0:24:52.67:0,53,598	0/0:22,1:25:33.52:0,34,751	0/0:8,0:11:27.06:0,27,328
chr10	51200791	.	T	TG	221.85	PASS	AB=0.904;AC=7;AF=0.125;AN=56;BaseQRankSum=4.637;DP=517;FS=5.810;HRun=0;HaplotypeScore=89.5663;InbreedingCoeff=-0.1536;MQ=62.55;MQ0=15;MQRankSum=-4.363;QD=2.22;ReadPosRankSum=-0.244;VQSLOD=2.0765;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:12,1:13:17.69:18,0,77	0/1:11,1:12:58.59:59,0,75	0/0:45,0:13:17.85:0,18,176	0/0:30,0:19:28.08:0,28,293	0/0:21,0:21:55.76:0,56,665	0/0:18,0:18:43.26:0,43,275	0/0:10,0:10:23.14:0,23,163	0/0:27,0:27:70.02:0,70,833	0/0:12,0:12:35.95:0,36,391	0/0:20,0:20:56.90:0,57,700	0/0:26,0:26:68.55:0,69,805	0/1:16,2:16:99:107,0,115	0/0:13,0:13:13.28:0,13,139	0/0:20,0:20:58.16:0,58,580	0/1:19,0:18:9.55:10,0,171	0/1:18,1:19:16.52:17,0,134	0/0:20,0:20:50.69:0,51,507	0/1:8,4:11:39.27:94,0,39	0/0:16,0:15:42.05:0,42,506	0/0:19,0:19:47.01:0,47,570	0/0:9,0:9:26.98:0,27,330	0/0:12,0:12:0.73:0,1,102	0/0:17,1:17:11.95:0,12,161	0/1:6,1:7:28.80:46,0,29	0/0:20,0:20:56.93:0,57,571	0/0:21,0:21:49.20:0,49,557	0/0:25,1:25:62.47:0,62,753	0/0:13,0:13:15.87:0,16,268
chr10	51203914	.	CACAG	C	7481.64	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=13.908;DP=820;FS=8.309;HRun=0;HaplotypeScore=188.5313;InbreedingCoeff=0.9876;MQ=64.45;MQ0=6;MQRankSum=-3.884;QD=23.16;ReadPosRankSum=4.017;VQSLOD=4.0372;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:20,35:55:99:1449,99,0	1/1:5,6:11:23.91:321,24,0	0/0:39,0:28:26.27:0,26,668	0/0:29,0:24:38.98:0,39,833	0/0:33,1:34:47.99:0,48,1108	1/1:24,0:24:30.07:426,30,0	1/1:19,0:19:33.08:483,33,0	0/0:43,0:43:69.19:0,69,1319	0/0:33,1:34:23.86:0,24,1536	0/0:32,1:33:23.73:0,24,1452	0/0:22,0:22:42.14:0,42,967	1/1:11,10:22:35.99:499,36,0	1/1:12,19:31:60.19:932,60,0	0/0:26,0:26:63.19:0,63,1377	1/1:12,21:33:59.97:903,60,0	1/1:7,23:30:72.13:1080,72,0	0/0:26,0:26:60.15:0,60,1269	1/1:7,3:10:9.03:145,9,0	0/0:21,0:20:36.12:0,36,856	0/0:31,0:31:75.24:0,75,1724	0/0:51,1:51:84.02:0,84,3024	1/1:13,13:28:17.41:280,17,0	1/1:12,14:26:21.03:310,21,0	1/1:12,22:34:43.01:654,43,0	0/0:22,0:22:42.14:0,42,992	0/0:41,1:42:29.78:0,30,1621	0/0:36,0:35:57.10:0,57,1176	0/0:7,0:7:18.06:0,18,435
chr10	51203932	.	CAG	C	477.42	PASS	AB=0.970;AC=11;AF=0.196;AN=56;BaseQRankSum=17.381;DP=896;FS=4.107;HRun=0;HaplotypeScore=233.9748;InbreedingCoeff=-0.0296;MQ=54.31;MQ0=10;MQRankSum=-5.247;QD=1.53;ReadPosRankSum=7.117;VQSLOD=2.0308;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:59,0:59:75.05:75,0,110	0/1:10,0:10:10.30:10,0,74	0/0:49,0:32:81.11:0,81,1230	0/0:53,0:29:47.92:0,48,1005	0/0:26,0:26:72.23:0,72,1251	1/1:11,10:21:7.98:174,8,0	0/1:15,9:24:12.54:158,0,13	0/0:41,0:41:99:0,117,1965	0/0:31,0:31:80.65:0,81,1484	0/0:41,0:41:99:0,114,2032	0/0:20,0:20:57.18:0,57,1017	0/1:27,0:27:18.60:19,0,145	0/1:33,0:33:42.45:42,0,158	0/0:33,0:33:99:0,99,1706	0/1:42,0:42:49.70:51,0,50	0/1:35,0:35:48.88:49,0,169	0/0:30,0:30:81.19:0,81,1443	0/0:11,0:11:10.71:0,11,274	0/0:28,0:27:81.27:0,81,1350	0/0:35,0:35:99:0,105,1902	0/0:59,0:58:99:0,162,2965	0/0:33,0:33:24.10:0,24,360	0/1:29,0:29:10.43:10,0,69	0/1:33,0:33:38.17:38,0,54	0/0:21,0:21:60.17:0,60,1023	0/0:33,0:33:89.64:0,90,1670	0/0:26,0:25:75.26:0,75,1351	0/0:12,0:12:36.05:0,36,528
chr10	51203936	.	CAG	C	545.18	PASS	AB=0.971;AC=11;AF=0.196;AN=56;BaseQRankSum=17.116;DP=909;FS=5.294;HRun=0;HaplotypeScore=247.7806;InbreedingCoeff=-0.0019;MQ=54.82;MQ0=10;MQRankSum=-4.083;QD=1.70;ReadPosRankSum=4.823;VQSLOD=1.7131;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:61,0:61:78.73:79,0,84	0/1:12,0:12:7.71:8,0,89	0/0:48,0:31:85.27:0,85,1236	0/0:56,0:33:46.08:0,46,971	0/0:28,0:28:78.22:0,78,1296	1/1:12,10:22:13.18:221,13,0	0/1:16,9:25:12.98:157,0,13	0/0:38,0:38:99:0,111,1886	0/0:30,0:30:83.71:0,84,1583	0/0:41,0:41:99:0,105,1863	0/0:19,0:19:54.17:0,54,972	0/1:24,0:24:25.53:26,0,77	0/1:33,0:33:45.75:46,0,99	0/0:33,0:33:99:0,99,1700	0/1:46,0:46:27.85:51,0,28	0/1:37,0:37:55.45:55,0,98	0/0:29,0:29:78.25:0,78,1406	0/0:12,0:12:13.56:0,14,264	0/0:29,0:28:81.26:0,81,1319	0/0:37,0:37:99:0,111,1965	0/0:57,0:56:99:0,159,2957	0/0:35,0:35:17.54:0,18,217	0/1:29,0:29:13.53:14,0,24	0/1:32,0:32:12.82:41,0,13	0/0:19,0:19:57.19:0,57,1024	0/0:35,0:35:95.68:0,96,1783	0/0:28,0:27:78.25:0,78,1371	0/0:12,0:12:36.09:0,36,583
chr10	51203956	.	CAGAGAG	C	5612.36	PASS	AB=0.629;AC=23;AF=0.411;AN=56;BaseQRankSum=12.902;DP=899;FS=0.000;HRun=0;HaplotypeScore=288.3773;InbreedingCoeff=0.8680;MQ=53.81;MQ0=9;MQRankSum=-12.676;QD=15.50;ReadPosRankSum=-2.953;VQSLOD=3.2469;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:24,30:55:33.13:588,33,0	1/1:2,10:13:10.86:235,11,0	0/0:40,0:28:34.82:0,35,824	0/0:65,0:33:41.26:0,41,857	0/0:26,0:27:53.66:0,54,1482	0/1:9,0:22:55.96:56,0,72	1/1:9,1:26:3.63:6,4,0	0/0:34,0:34:57.19:0,57,1559	0/0:32,0:36:84.29:0,84,2526	0/0:31,0:32:87.29:0,87,2572	0/0:15,0:16:36.10:0,36,992	1/1:6,21:28:36.03:697,36,0	1/1:6,28:34:42:899,42,0	0/0:33,0:33:84.29:0,84,2582	1/1:10,36:49:79.28:1471,79,0	1/1:11,24:35:50.75:983,51,0	0/0:30,0:30:66.23:0,66,2067	1/1:5,4:9:9.03:193,9,0	0/0:27,0:29:66.23:0,66,1886	0/0:35,0:35:75.24:0,75,2373	0/0:57,0:63:99:0,129,3707	1/1:6,25:31:11.92:182,12,0	1/1:5,25:31:6.02:106,6,0	1/1:13,16:29:12.44:197,12,0	0/0:23,0:23:63.22:0,63,1904	0/0:26,0:29:66.22:0,66,2006	0/0:23,0:24:60.21:0,60,1849	0/0:17,0:17:45.15:0,45,1324
chr10	51207543	.	G	GCT	4578.69	PASS	AB=0.715;AC=18;AF=0.321;AN=56;BaseQRankSum=6.016;DP=682;FS=6.911;HRun=0;HaplotypeScore=101.4048;InbreedingCoeff=0.7137;MQ=68.79;MQ0=15;MQRankSum=1.699;QD=20.72;ReadPosRankSum=3.726;VQSLOD=4.9622;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,19:23:2.96:542,3,0	0/1:7,10:17:42.08:348,0,42	0/0:45,0:14:4.18:0,4,50	0/0:61,0:26:4.99:0,5,118	0/0:16,0:15:39.12:0,39,469	0/0:17,0:20:29.59:0,30,291	0/0:15,0:15:27.07:0,27,309	0/0:36,0:40:71.31:0,71,736	0/0:29,0:29:29.45:0,29,524	0/0:29,0:29:60.18:0,60,722	0/0:16,0:16:33.10:0,33,398	1/1:6,22:29:33.04:530,33,0	1/1:11,15:26:22.81:380,23,0	0/0:24,0:25:41.96:0,42,484	0/1:21,6:28:31.47:443,0,31	1/1:12,26:38:0.02:948,0,0	0/0:35,0:35:21.57:0,22,596	1/1:5,9:13:35.08:473,35,0	0/0:14,0:14:19.68:0,20,194	0/0:13,0:13:39.12:0,39,469	0/0:31,0:30:66.20:0,66,792	1/1:8,6:13:18.06:289,18,0	1/1:4,10:14:15.05:241,15,0	1/1:3,14:15:24.08:385,24,0	0/0:14,0:13:17.27:0,17,188	0/0:22,0:22:54.16:0,54,651	0/0:26,0:25:51.14:0,51,596	0/0:8,0:9:17.89:0,18,194
chr10	51207590	.	G	GTC	425.21	PASS	AB=0.931;AC=14;AF=0.269;AN=52;BaseQRankSum=6.522;DP=695;FS=12.237;HRun=0;HaplotypeScore=116.2119;InbreedingCoeff=0.2754;MQ=48.02;MQ0=31;MQRankSum=0.302;QD=1.71;ReadPosRankSum=-3.249;VQSLOD=0.5449;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:37,0:34:17.16:106,17,0	1/1:11,0:12:0.81:88,1,0	./.	./.	0/0:25,0:24:24.02:0,24,238	0/0:18,0:18:0.47:0,0,1	0/0:13,0:8:0.26:0,0,1	0/0:30,0:25:10.12:0,10,142	0/0:23,0:25:41.75:0,42,439	0/0:35,0:36:64.85:0,65,599	0/0:18,0:21:14.75:0,15,134	0/1:28,0:27:8.87:73,0,9	0/0:23,0:20:2.61:0,3,16	0/0:26,0:30:2.37:0,2,317	1/1:27,0:25:3:25,3,0	0/1:40,0:38:11.52:103,0,12	0/0:37,0:36:50.12:0,50,493	0/1:12,0:11:4.21:52,0,4	0/0:28,0:25:13.19:0,13,190	0/0:22,0:22:14.30:0,14,284	0/0:46,0:39:39.12:0,39,557	1/1:25,0:23:4.33:29,4,0	0/0:31,0:30:8.60:0,9,41	0/1:21,0:19:12.53:16,0,13	0/1:10,19:28:62.35:74,0,62	0/0:26,0:26:37.48:0,37,324	0/0:27,0:26:39.28:0,39,352	0/1:14,0:13:5.64:6,0,91
chr10	51207622	.	C	CTCTCTG	2358.51	PASS	AB=0.989;AC=18;AF=0.321;AN=56;BaseQRankSum=5.204;DP=730;FS=0.878;HRun=0;HaplotypeScore=144.2979;InbreedingCoeff=0.5679;MQ=49.56;MQ0=20;MQRankSum=2.543;QD=8.67;ReadPosRankSum=0.776;VQSLOD=2.4871;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:41,0:39:63.47:678,63,0	0/1:10,0:10:58.13:126,0,58	0/0:10,0:5:8.94:0,9,72	0/1:10,0:7:0.14:0,0,87	0/0:33,0:33:60:0,60,703	0/1:16,0:15:11.55:19,0,12	1/1:22,0:17:14.80:102,15,0	0/0:39,0:37:96.59:0,97,811	0/0:33,0:33:80.91:0,81,1222	0/0:35,0:35:88.04:0,88,1355	0/0:21,0:20:32.71:0,33,426	1/1:29,0:27:25.85:373,26,0	0/1:22,0:19:4.90:124,0,5	0/0:27,0:27:63.33:0,63,856	1/1:4,25:32:3.01:48,3,0	0/1:30,0:27:0.77:406,0,1	0/0:37,0:36:81.94:0,82,1111	1/1:9,0:8:12.64:189,13,0	0/0:23,0:23:38.80:0,39,516	0/0:25,0:26:34.32:0,34,625	0/0:49,0:42:72.55:0,73,1302	0/1:25,0:25:21.18:168,0,21	0/0:35,0:34:43.56:0,44,360	1/1:23,0:21:37.72:312,38,0	0/0:27,0:26:23.61:0,24,225	0/0:27,0:27:65.23:0,65,825	0/0:25,0:25:57.71:0,58,852	0/0:11,0:11:19.17:0,19,274
chr10	51210213	.	TA	T	3956.20	PASS	AB=0.889;AC=25;AF=0.446;AN=56;BaseQRankSum=11.361;DP=598;FS=4.130;HRun=12;HaplotypeScore=57.7654;InbreedingCoeff=0.8848;MQ=59.21;MQ0=4;MQRankSum=3.898;QD=15.33;ReadPosRankSum=5.486;VQSLOD=4.3916;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:13,27:40:56.74:499,57,0	1/1:2,7:9:17.93:139,18,0	0/1:7,1:4:17.22:17,0,23	0/0:7,0:5:6.01:0,6,61	0/0:36,2:38:49.55:0,50,830	1/1:3,15:18:41.83:325,42,0	1/1:3,15:18:27.74:308,28,0	0/0:35,2:37:55.17:0,55,797	0/0:19,1:20:15.83:0,16,336	0/0:28,0:28:65.71:0,66,641	0/0:19,0:19:51.02:0,51,492	1/1:2,14:16:29.89:232,30,0	1/1:4,18:22:44.82:348,45,0	0/0:20,1:21:30.82:0,31,476	1/1:5,15:20:38.82:302,39,0	1/1:7,27:35:73.72:563,74,0	0/0:22,0:22:47.95:0,48,463	1/1:4,27:31:68.71:534,69,0	0/0:24,2:26:7.56:0,8,423	0/0:22,1:23:18.85:0,19,373	0/0:2,0:2:6.01:0,6,61	1/1:1,8:9:20.45:162,20,0	1/1:3,16:19:41.81:325,42,0	1/1:1,12:13:26.81:201,27,0	0/0:19,1:22:36.71:0,37,534	0/0:36,1:37:69.91:0,70,876	0/0:27,1:28:51.89:0,52,673	0/0:8,0:8:23.87:0,24,219
chr10	51210483	.	GCA	G	479.85	PASS	AB=0.899;AC=16;AF=0.296;AN=54;BaseQRankSum=4.461;DP=645;FS=19.850;HRun=0;HaplotypeScore=85.6802;InbreedingCoeff=-0.4145;MQ=63.97;MQ0=12;MQRankSum=0.476;QD=1.39;ReadPosRankSum=2.414;VQSLOD=0.3011;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:42,1:43:99:139,0,335	0/1:7,0:7:8.65:9,0,122	./.	0/0:28,0:17:0.89:0,1,2	0/1:15,8:24:99:99,0,164	0/0:23,0:22:6.01:0,6,67	0/0:28,0:26:0.72:0,1,40	0/0:20,0:19:6.02:0,6,78	0/0:18,0:21:13.10:0,13,361	0/1:9,0:12:2.17:2,0,110	0/1:15,4:19:11.76:12,0,232	0/0:24,0:25:27.42:0,27,442	0/1:15,3:18:44.60:45,0,188	0/0:22,3:25:3:0,3,416	0/1:18,4:22:35.58:36,0,304	0/0:28,0:28:36.12:0,36,520	0/1:40,1:44:69.84:70,0,700	0/1:21,4:25:28.47:28,0,371	0/1:15,0:15:18.70:25,0,19	0/1:16,3:19:11.30:11,0,247	0/0:31,0:31:18.03:0,18,208	0/1:10,0:10:1.48:1,0,39	0/1:16,0:16:11.41:11,0,240	0/1:35,2:36:23.04:23,0,471	0/1:10,4:14:47.65:48,0,107	0/0:11,0:10:11.99:0,12,116	0/0:26,0:25:30.57:0,31,424	0/1:12,5:17:62.55:63,0,277
chr10	51212372	.	G	GA	6082.73	PASS	AB=0.907;AC=26;AF=0.464;AN=56;BaseQRankSum=9.686;DP=717;FS=1.458;HRun=11;HaplotypeScore=98.1636;InbreedingCoeff=0.8196;MQ=76.20;MQ0=1;MQRankSum=-0.357;QD=16.22;ReadPosRankSum=2.685;VQSLOD=5.4326;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,50:61:92.61:1078,93,0	1/1:4,14:18:12.83:305,13,0	0/0:32,0:29:29.86:0,30,226	0/0:18,0:14:4.21:0,4,112	0/0:23,0:26:31.49:0,31,357	1/1:2,13:16:38.77:378,39,0	1/1:3,21:24:36.83:544,37,0	0/1:24,2:26:11.65:12,0,279	0/0:19,0:21:52.76:0,53,389	0/0:26,0:26:19.87:0,20,325	0/0:19,0:19:50.77:0,51,393	1/1:4,16:20:41.62:389,42,0	1/1:7,29:39:28.31:610,28,0	0/0:27,0:27:68.71:0,69,531	1/1:6,21:27:42.01:506,42,0	1/1:1,17:18:10.41:282,10,0	0/0:36,3:39:44.13:0,44,687	1/1:2,21:23:54.11:548,54,0	0/0:18,1:20:12.52:0,13,248	0/0:23,3:26:29.23:0,29,410	0/0:34,0:36:43.77:0,44,589	1/1:7,22:30:53.58:496,54,0	1/1:3,19:23:10.56:444,11,0	1/1:5,21:25:23.71:430,24,0	0/0:22,0:22:47.79:0,48,370	0/1:20,3:23:58.79:59,0,139	0/0:20,0:20:44.73:0,45,343	0/0:8,0:8:17.91:0,18,137
chr10	51213628	.	CA	C	7832.38	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=11.528;DP=560;FS=2.481;HRun=2;HaplotypeScore=55.8271;InbreedingCoeff=0.9928;MQ=82.01;MQ0=0;MQRankSum=-1.352;QD=32.63;ReadPosRankSum=2.848;VQSLOD=4.7295;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,25:25:60.19:777,60,0	1/1:0,6:6:15.05:194,15,0	0/0:14,0:13:33.05:0,33,436	0/0:17,0:17:38.98:0,39,438	0/0:16,0:16:48.15:0,48,700	1/1:0,7:7:15.05:195,15,0	1/1:1,24:25:66.21:856,66,0	0/0:22,0:22:48.14:0,48,683	0/0:28,0:28:84.27:0,84,1237	0/0:18,0:18:51.17:0,51,763	0/0:9,0:9:27.06:0,27,347	1/1:0,33:33:90.29:1168,90,0	1/1:0,20:20:45.15:584,45,0	0/0:29,0:29:87.26:0,87,1241	1/1:0,21:21:54.18:701,54,0	1/1:1,27:28:51.28:911,51,0	0/0:28,0:28:84.28:0,84,1243	1/1:1,17:18:48.16:623,48,0	0/0:24,0:24:63.19:0,63,876	0/0:14,0:14:35.98:0,36,453	0/0:34,0:34:99:0,102,1526	1/1:2,15:17:42.14:542,42,0	1/1:0,9:9:23.88:310,24,0	1/1:0,31:31:75.24:973,75,0	0/0:17,0:17:51.16:0,51,727	0/0:15,0:15:42.13:0,42,591	0/0:30,0:30:90.22:0,90,1300	0/0:5,0:5:15.03:0,15,204
chr10	51214759	.	TTA	T	1442.75	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.660;DP=647;FS=5.475;HRun=0;HaplotypeScore=74.6541;InbreedingCoeff=0.9976;MQ=87.12;MQ0=0;MQRankSum=-1.645;QD=40.08;ReadPosRankSum=2.255;VQSLOD=5.7757;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:87.27:0,87,1727	0/0:14,0:14:42.12:0,42,781	0/0:25,0:25:68.41:0,68,1344	0/0:18,0:18:48.07:0,48,776	0/0:29,0:29:87.28:0,87,1717	1/1:0,23:23:63.22:1027,63,0	1/1:0,13:13:33.11:538,33,0	0/0:35,0:35:99:0,105,1873	0/0:17,0:17:51.15:0,51,966	0/0:24,0:24:72.24:0,72,1429	0/0:26,0:26:78.16:0,78,1520	0/0:28,0:28:84.24:0,84,1564	0/0:25,0:25:75.19:0,75,1410	0/0:25,0:25:75.24:0,75,1464	0/0:25,0:25:75.24:0,75,1471	0/0:14,0:14:42.13:0,42,817	0/0:35,0:35:99:0,105,2051	0/0:25,0:25:75.24:0,75,1481	0/0:31,0:31:93.30:0,93,1811	0/0:30,0:30:90.25:0,90,1646	0/0:11,0:11:33.08:0,33,596	0/0:25,0:25:72.11:0,72,1375	0/0:27,0:27:81.24:0,81,1569	0/0:22,0:22:66.16:0,66,1240	0/0:23,0:23:69.20:0,69,1321	0/0:23,0:23:69.23:0,69,1368	0/0:18,0:18:54.16:0,54,1038	0/0:7,0:7:21.07:0,21,422
chr10	51216110	.	T	TAC	7112.75	PASS	AB=0.944;AC=21;AF=0.375;AN=56;BaseQRankSum=-13.348;DP=697;FS=7.885;HRun=0;HaplotypeScore=77.0210;InbreedingCoeff=0.9477;MQ=64.28;MQ0=3;MQRankSum=1.966;QD=27.46;ReadPosRankSum=4.942;VQSLOD=6.0234;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:13,35:48:54.84:1369,55,0	1/1:3,13:16:33.11:532,33,0	0/0:39,0:22:26.09:0,26,293	0/0:28,0:17:18.02:0,18,203	0/0:18,0:18:47.98:0,48,559	0/0:28,0:28:68.20:0,68,770	0/1:16,1:17:0.27:0,0,485	0/0:32,0:32:54.15:0,54,645	0/0:17,0:17:36.11:0,36,436	0/0:26,0:26:51.14:0,51,607	0/0:18,0:18:41.49:0,41,481	1/1:7,20:27:11.77:690,12,0	1/1:3,18:22:11.77:689,12,0	0/0:24,0:24:51.14:0,51,605	1/1:6,19:26:20.80:835,21,0	1/1:9,15:24:36.12:581,36,0	0/0:27,0:28:57.01:0,57,669	1/1:2,18:21:48.16:774,48,0	0/0:19,0:19:48.15:0,48,581	0/0:23,0:25:51.69:0,52,562	0/0:37,0:37:93.28:0,93,1128	1/1:10,7:17:21.07:339,21,0	1/1:0,19:19:51.17:822,51,0	1/1:7,12:21:30.10:482,30,0	0/0:32,0:32:81.25:0,81,982	0/0:26,0:26:54.16:0,54,655	0/0:29,0:29:72.22:0,72,873	0/0:11,0:11:30.09:0,30,364
chr10	51219345	.	CT	C	1241.95	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.960;DP=639;FS=0.635;HRun=2;HaplotypeScore=60.2583;InbreedingCoeff=0.9630;MQ=86.48;MQ0=0;MQRankSum=-3.241;QD=28.23;ReadPosRankSum=-0.261;VQSLOD=3.0075;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:93.27:0,93,1346	0/0:5,0:5:15.05:0,15,225	0/0:29,0:29:78.26:0,78,1144	0/0:16,0:16:35.12:0,35,600	0/0:23,0:23:66.22:0,66,988	1/1:1,19:20:51.17:662,51,0	1/1:0,24:24:54.17:701,54,0	0/0:27,0:27:78.23:0,78,1098	0/0:19,0:19:57.18:0,57,835	0/0:26,0:26:78.26:0,78,1169	0/0:15,0:15:45.14:0,45,646	0/0:23,0:23:69.23:0,69,1033	0/0:22,0:22:66.21:0,66,969	0/0:23,0:23:69.19:0,69,973	0/0:22,0:22:66.22:0,66,972	0/0:22,0:22:66.21:0,66,952	0/0:32,0:32:93.27:0,93,1347	0/0:25,0:25:75.25:0,75,1124	0/0:14,0:14:42.13:0,42,609	0/0:23,0:23:69.21:0,69,993	0/0:15,0:15:42.13:0,42,609	0/0:29,0:29:87.28:0,87,1263	0/0:24,0:24:72.24:0,72,1079	0/0:36,0:36:99:0,108,1595	0/0:30,0:30:87.29:0,87,1304	0/0:31,0:31:90.30:0,90,1330	0/0:28,0:28:81.26:0,81,1192	0/0:3,0:3:9.03:0,9,135
chr10	51222791	.	TTGTCTGTCTGTC	T	9650.84	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=12.697;DP=856;FS=14.484;HRun=0;HaplotypeScore=277.9116;InbreedingCoeff=0.9656;MQ=64.07;MQ0=6;MQRankSum=-14.430;QD=30.06;ReadPosRankSum=1.758;VQSLOD=2.8098;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:21,19:40:15.05:368,15,0	1/1:9,10:19:21.36:770,21,0	0/0:41,0:19:12.04:0,12,281	0/0:38,0:26:27.56:0,28,877	0/0:40,0:41:72.25:0,72,3336	0/0:18,0:26:39.13:0,39,1650	0/0:10,0:23:39.13:0,39,1957	0/0:27,0:27:33.11:0,33,1541	0/0:21,0:21:42.14:0,42,2417	0/0:32,0:32:57.20:0,57,2800	0/0:19,0:19:42.13:0,42,2313	1/1:13,22:35:51.17:1479,51,0	1/1:12,24:36:60.20:1789,60,0	0/0:30,0:30:69.19:0,69,3538	1/1:15,29:44:54.19:1494,54,0	1/1:7,21:29:48.16:1533,48,0	0/0:30,0:30:60.21:0,60,3000	1/1:18,2:20:7.13:309,7,0	0/0:25,0:25:33.10:0,33,1550	0/0:21,0:21:51.18:0,51,2833	0/0:55,0:59:99:0,132,6828	1/1:14,20:34:44.72:1124,45,0	1/1:7,14:21:20.85:541,21,0	1/1:23,20:43:9.03:245,9,0	0/0:25,0:25:57.18:0,57,2592	0/0:37,0:37:69.24:0,69,3563	0/0:34,0:34:63.22:0,63,3137	0/0:4,0:4:12.04:0,12,605
chr10	51223355	.	GACACAC	G	9712.53	PASS	AB=0.596;AC=23;AF=0.411;AN=56;BaseQRankSum=15.388;DP=812;FS=30.004;HRun=0;HaplotypeScore=169.7128;InbreedingCoeff=0.9079;MQ=56.46;MQ0=9;MQRankSum=-17.652;QD=31.33;ReadPosRankSum=-0.624;VQSLOD=2.8669;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,23:38:25.31:667,25,0	1/1:2,7:11:18.06:333,18,0	0/0:42,0:14:21.54:0,22,559	0/0:34,0:16:21.38:0,21,533	0/0:28,0:30:66.21:0,66,1812	1/1:11,9:22:36.12:712,36,0	1/1:13,13:26:36.12:753,36,0	0/0:31,0:31:39.71:0,40,1044	0/0:27,0:27:66.17:0,66,1929	0/0:30,0:32:63.20:0,63,1801	0/0:24,0:24:59.87:0,60,1853	1/1:6,17:26:17.09:1103,17,0	1/1:2,23:29:57.19:1112,57,0	0/0:36,0:36:84.24:0,84,2496	1/1:5,28:34:57.19:1184,57,0	0/1:9,19:28:48.38:963,0,48	0/0:37,0:45:99:0,108,2901	1/1:2,14:16:29.59:581,30,0	0/0:16,0:15:21.07:0,21,672	0/0:23,0:23:51.12:0,51,1374	0/0:38,0:39:96.29:0,96,2792	1/1:10,20:31:54.18:1120,54,0	1/1:4,18:23:50.92:1056,51,0	1/1:8,18:26:6.49:128,6,0	0/0:30,0:32:69.22:0,69,1922	0/0:38,0:38:96.33:0,96,2909	0/0:34,0:37:90.31:0,90,2631	0/0:16,0:16:39.13:0,39,1054
chr10	51225339	.	G	GTA	2748.93	PASS	AB=0.610;AC=23;AF=0.411;AN=56;BaseQRankSum=4.178;DP=495;FS=7.766;HRun=0;HaplotypeScore=89.8635;InbreedingCoeff=0.9301;MQ=69.04;MQ0=7;MQRankSum=-1.856;QD=12.97;ReadPosRankSum=-0.489;VQSLOD=2.7964;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:20:44.76:364,45,0	1/1:10,0:10:7.61:261,8,0	0/0:26,0:22:63.10:0,63,665	0/0:20,0:14:35.92:0,36,320	0/0:17,0:17:35.98:0,36,391	1/1:19,0:18:29.94:244,30,0	1/1:13,0:12:20.79:165,21,0	0/0:23,0:22:58.27:0,58,548	0/0:14,0:13:39:0,39,429	0/0:17,0:17:45.09:0,45,554	0/0:14,0:14:35.90:0,36,378	0/1:9,16:24:0:0,0,0	1/1:17,0:17:32.77:293,33,0	0/0:10,0:10:26.89:0,27,263	1/1:25,0:24:38.50:404,38,0	1/1:22,0:22:48.01:545,48,0	0/0:21,0:21:34.54:0,35,265	1/1:9,0:9:23.51:174,24,0	0/0:17,0:17:44.98:0,45,443	0/0:12,0:12:33.02:0,33,363	0/0:16,0:16:38.20:0,38,363	1/1:15,6:21:17.93:142,18,0	1/1:10,5:15:11.98:98,12,0	1/1:16,0:14:18.06:276,18,0	0/0:19,0:19:50.60:0,51,521	0/0:25,0:24:3.97:0,4,532	0/0:26,0:26:66.11:0,66,798	0/0:6,0:6:11.97:0,12,110
chr10	51226495	.	C	CT	1062.71	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-6.577;DP=539;FS=2.860;HRun=9;HaplotypeScore=54.7790;InbreedingCoeff=0.9703;MQ=78.39;MQ0=0;MQRankSum=-1.392;QD=21.69;ReadPosRankSum=-0.139;VQSLOD=4.1983;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:21:59.03:0,59,500	0/0:7,0:7:21:0,21,182	0/0:20,0:21:27.47:0,27,209	0/0:13,0:13:14.94:0,15,123	0/0:23,1:24:26.79:0,27,461	1/1:8,17:28:62.46:620,62,0	1/1:2,19:21:51.14:564,51,0	0/0:26,0:25:68.97:0,69,596	0/0:7,0:7:21:0,21,182	0/0:26,1:27:26.77:0,27,461	0/0:19,0:19:13.92:0,14,333	0/0:16,0:16:41.99:0,42,364	0/0:19,0:19:50.99:0,51,443	0/0:14,0:14:38.99:0,39,338	0/0:30,0:30:86.98:0,87,755	0/0:17,0:17:35.98:0,36,313	0/0:18,0:18:47.96:0,48,411	0/0:14,0:14:32.94:0,33,279	0/0:18,0:19:24.22:0,24,319	0/0:30,0:30:77.97:0,78,677	0/0:9,0:9:17.99:0,18,156	0/0:23,0:23:53.97:0,54,469	0/0:16,0:16:41.99:0,42,365	0/0:18,0:18:47.99:0,48,417	0/0:20,0:20:47.58:0,48,401	0/0:19,0:21:44.02:0,44,371	0/0:27,0:27:74.97:0,75,651	0/0:14,0:14:29.98:0,30,260
chr10	51227976	.	CT	C	1552.79	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.788;DP=758;FS=1.207;HRun=2;HaplotypeScore=72.4625;InbreedingCoeff=0.9996;MQ=83.20;MQ0=0;MQRankSum=-1.404;QD=33.04;ReadPosRankSum=1.164;VQSLOD=3.8033;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,105,1529	0/0:11,0:11:33.10:0,33,475	0/0:25,0:25:66.13:0,66,855	0/0:23,0:23:46.13:0,46,778	0/0:23,0:23:69.23:0,69,1034	1/1:1,19:20:57.18:740,57,0	1/1:1,26:27:72.23:935,72,0	0/0:43,0:43:99:0,126,1874	0/0:33,0:33:99:0,99,1458	0/0:31,0:31:87.26:0,87,1258	0/0:21,0:21:63.21:0,63,943	0/0:34,0:34:99:0,99,1458	0/0:32,0:32:90.30:0,90,1323	0/0:34,0:34:99:0,102,1528	0/0:41,0:41:99:0,123,1813	0/0:37,0:37:99:0,111,1646	0/0:30,0:30:84.23:0,84,1178	0/0:16,0:16:48.16:0,48,717	0/0:21,0:21:63.20:0,63,918	0/0:27,0:27:75.24:0,75,1099	0/0:26,0:26:78.22:0,78,1097	0/0:28,0:28:84.27:0,84,1226	0/0:22,0:22:66.20:0,66,946	0/0:26,0:26:78.26:0,78,1153	0/0:20,0:20:60.18:0,60,873	0/0:30,0:30:90.29:0,90,1316	0/0:31,0:30:90.30:0,90,1349	0/0:10,0:10:30.08:0,30,425
chr10	51232624	.	G	GT	5442.31	PASS	AB=0.875;AC=19;AF=0.339;AN=56;BaseQRankSum=-12.642;DP=685;FS=0.683;HRun=9;HaplotypeScore=66.8162;InbreedingCoeff=0.8968;MQ=73.23;MQ0=0;MQRankSum=-0.813;QD=24.19;ReadPosRankSum=3.957;VQSLOD=5.5292;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:56.86:0,57,483	1/1:0,11:11:30.08:332,30,0	0/0:21,0:21:38.13:0,38,303	0/0:10,0:10:15.84:0,16,127	0/0:35,0:35:92.93:0,93,803	0/0:33,0:35:91.02:0,91,763	0/0:32,0:32:89.97:0,90,778	0/0:48,1:49:99:0,117,988	0/0:28,0:29:77.02:0,77,657	0/0:27,0:27:74.91:0,75,640	0/0:15,1:16:5.75:0,6,270	1/1:2,21:23:57.15:631,57,0	1/1:4,22:26:51.14:564,51,0	0/0:17,0:17:16.04:0,16,308	1/1:4,24:29:72.03:778,72,0	1/1:3,26:29:60.16:664,60,0	0/0:21,1:22:23.79:0,24,435	1/1:4,30:34:87.17:937,87,0	0/0:22,0:22:62.97:0,63,544	0/0:34,0:34:86.82:0,87,737	0/0:25,0:25:65.81:0,66,552	1/1:3,11:17:9.97:310,10,0	1/1:5,19:25:47.39:618,47,0	1/1:4,20:24:54.15:597,54,0	0/0:14,0:14:38.95:0,39,331	0/0:20,0:20:44.98:0,45,390	0/0:26,0:26:59.97:0,60,520	0/1:6,1:7:12.18:12,0,135
chr10	51233123	.	A	AT	7400.09	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=2.097;DP=640;FS=6.171;HRun=2;HaplotypeScore=81.4820;InbreedingCoeff=0.9759;MQ=70.81;MQ0=2;MQRankSum=-0.891;QD=31.36;ReadPosRankSum=3.395;VQSLOD=4.4659;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:63.08:0,63,723	1/1:0,10:10:21.07:290,21,0	0/0:23,0:19:32.33:0,32,403	0/0:17,0:17:3.46:0,3,366	0/0:34,0:34:99:0,99,1126	1/1:3,17:20:45.15:620,45,0	1/1:0,13:13:24.08:331,24,0	0/0:37,0:37:99:0,108,1245	0/0:21,0:21:63.17:0,63,745	0/0:15,0:15:45.13:0,45,536	0/0:23,0:23:69.16:0,69,806	1/1:0,26:26:54.18:745,54,0	1/1:3,30:33:69.16:928,69,0	0/0:17,0:17:51.13:0,51,595	1/1:0,30:30:63.21:868,63,0	1/1:0,26:26:60.20:827,60,0	0/0:27,0:27:78.15:0,78,895	1/1:2,19:21:54.18:745,54,0	0/0:23,0:23:68.44:0,68,721	0/0:29,0:29:84.21:0,84,986	0/0:13,0:13:36.11:0,36,444	1/1:1,24:25:66.11:868,66,0	1/1:0,18:18:47.94:663,48,0	1/1:0,14:14:39.09:517,39,0	0/0:29,0:29:84.19:0,84,964	0/0:33,0:33:96.25:0,96,1131	0/0:24,0:24:72.09:0,72,812	0/0:16,0:16:48.15:0,48,590
chr10	51233243	.	T	TTCTCTCTCTCTCTC	1904.35	PASS	AB=0.921;AC=23;AF=0.411;AN=56;BaseQRankSum=10.111;DP=520;FS=0.512;HRun=0;HaplotypeScore=227.7022;InbreedingCoeff=0.8437;MQ=64.05;MQ0=8;MQRankSum=-5.960;QD=9.34;ReadPosRankSum=-2.886;VQSLOD=2.2616;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:11:20.98:0,21,318	1/1:4,0:4:3:37,3,0	0/0:27,0:15:32.72:0,33,681	0/1:32,0:22:27.06:27,0,771	0/0:22,0:22:56.81:0,57,1177	1/1:7,8:15:17.80:385,18,0	1/1:13,0:13:29.18:470,29,0	0/0:33,0:33:84.13:0,84,2115	0/0:11,0:11:17.27:0,17,306	0/0:18,0:18:37.60:0,38,839	0/0:15,0:15:39.09:0,39,731	1/1:18,0:18:10.19:112,10,0	1/1:19,0:19:9.77:134,10,0	0/0:14,0:14:26.74:0,27,335	1/1:19,0:19:15.33:205,15,0	1/1:18,0:18:27.88:220,28,0	0/0:17,0:17:14.90:0,15,556	1/1:16,0:16:15.16:180,15,0	0/0:20,0:18:36.11:0,36,988	0/0:27,0:27:65.95:0,66,1280	0/0:24,0:24:41.35:0,41,827	1/1:11,0:11:9:136,9,0	1/1:17,0:16:18.67:174,19,0	1/1:18,0:18:9.02:36,9,0	0/0:21,0:21:44.76:0,45,932	0/0:21,0:20:44.75:0,45,1191	0/0:23,0:23:6.30:0,6,766	0/0:9,0:8:16.28:0,16,353
chr10	51233245	.	CAT	C	2748.92	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=8.030;DP=516;FS=13.369;HRun=0;HaplotypeScore=112.4224;InbreedingCoeff=0.9286;MQ=63.11;MQ0=8;MQRankSum=-1.125;QD=16.86;ReadPosRankSum=-0.279;VQSLOD=2.9302;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:11:18.06:0,18,230	1/1:1,1:2:1.24:34,1,0	0/0:27,0:14:28.80:0,29,501	0/0:36,0:22:39.43:0,39,676	0/0:22,0:22:57.96:0,58,798	1/1:10,3:12:7.91:106,8,0	1/1:11,3:14:33.11:429,33,0	0/0:36,0:36:39.96:0,40,1297	0/0:10,0:10:16.30:0,16,232	0/0:19,0:19:17.40:0,17,654	0/0:16,0:16:39.11:0,39,556	1/1:12,6:19:30.70:330,31,0	1/1:12,7:19:30.34:369,30,0	0/0:12,0:12:17.99:0,18,308	1/1:16,0:17:23.20:404,23,0	1/1:13,2:19:27.77:357,28,0	0/0:16,0:17:41.82:0,42,557	1/1:11,3:15:22.22:316,22,0	0/0:19,0:17:26.94:0,27,692	0/0:25,0:25:39.12:0,39,851	0/0:26,0:27:41.88:0,42,592	1/1:10,1:11:11.18:180,11,0	1/1:11,2:16:14.15:368,14,0	1/1:10,3:17:8.55:71,9,0	0/0:21,0:21:35.50:0,35,590	0/0:20,0:19:50.48:0,50,913	0/0:24,0:24:14.02:0,14,591	0/0:9,0:8:18.06:0,18,291
chr10	51233247	.	T	TTCTCTC	6395.33	PASS	AB=1.000;AC=51;AF=0.944;AN=54;BaseQRankSum=-1.721;DP=641;FS=4.372;HRun=0;HaplotypeScore=204.1593;InbreedingCoeff=0.3290;MQ=58.39;MQ0=8;MQRankSum=0.556;QD=10.59;ReadPosRankSum=1.752;VQSLOD=3.8845;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:16:2.52:21,3,0	./.	1/1:27,0:14:0.59:7,1,0	0/0:34,0:21:4.63:0,5,169	1/1:20,1:28:8.15:172,8,0	1/1:20,0:19:20.39:254,20,0	1/1:18,0:18:14.99:181,15,0	1/1:42,0:42:22.32:459,22,0	1/1:8,6:20:12.04:317,12,0	1/1:18,5:26:38.10:764,38,0	1/1:13,5:20:3.01:97,3,0	1/1:21,0:22:13.34:155,13,0	1/1:27,0:27:18.05:241,18,0	1/1:9,6:18:6.02:191,6,0	1/1:22,0:23:12.04:202,12,0	1/1:22,0:26:32.66:520,33,0	1/1:13,7:20:6.02:174,6,0	1/1:17,0:18:12.04:225,12,0	1/1:19,0:17:18.04:346,18,0	1/1:16,8:27:12.04:294,12,0	1/1:16,0:28:4.57:82,5,0	0/1:16,0:15:0.02:1,0,0	1/1:20,0:23:12.03:212,12,0	1/1:17,0:21:13.57:195,14,0	1/1:12,9:27:12.04:327,12,0	1/1:22,6:30:33.96:673,34,0	1/1:14,0:25:6.02:166,6,0	1/1:9,1:11:5.99:119,6,0
chr10	51233453	.	ATGTTAGGCGG	A	2905.64	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.058;DP=778;FS=4.414;HRun=0;HaplotypeScore=224.1422;InbreedingCoeff=0.9977;MQ=70.76;MQ0=0;MQRankSum=-9.190;QD=66.04;ReadPosRankSum=-0.017;VQSLOD=2.8291;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,148,7605	0/0:7,0:7:21.07:0,21,925	0/0:13,0:13:36.04:0,36,1544	0/0:11,0:11:33.11:0,33,1525	0/0:29,0:29:84.29:0,84,4354	1/1:1,20:21:42.14:1367,42,0	1/1:3,20:23:51.18:1660,51,0	0/0:29,0:29:78.26:0,78,3645	0/0:31,0:31:81.28:0,81,4179	0/0:32,0:32:90.31:0,90,4460	0/0:25,0:25:66.21:0,66,3284	0/0:29,0:29:87.30:0,87,4230	0/0:39,0:39:99:0,114,5539	0/0:37,0:37:99:0,108,5277	0/0:34,0:34:96.19:0,96,4497	0/0:26,0:26:75.26:0,75,3879	0/0:45,0:45:99:0,129,6510	0/0:17,0:17:42.14:0,42,2211	0/0:25,0:25:72.19:0,72,2933	0/0:26,0:26:75.24:0,75,3560	0/0:43,0:43:99:0,120,5524	0/0:24,0:24:69.24:0,69,3366	0/0:24,0:24:69.22:0,69,3376	0/0:27,0:26:81.23:0,81,3623	0/0:32,0:32:96.32:0,96,4707	0/0:39,0:39:99:0,111,5298	0/0:24,0:24:69.24:0,69,3515	0/0:16,0:16:48.12:0,48,2101
chr10	51234140	.	A	ATGGGAAG	4401.09	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.090;DP=710;FS=0.635;HRun=0;HaplotypeScore=176.7952;InbreedingCoeff=0.9165;MQ=87.84;MQ0=0;MQRankSum=-10.384;QD=104.79;ReadPosRankSum=-0.221;VQSLOD=5.9974;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,120,3066	0/0:12,0:12:33.11:0,33,822	0/0:25,0:25:72.23:0,72,1780	0/0:25,0:26:72.24:0,72,1640	0/0:39,0:39:99:0,111,2754	1/1:2,14:19:51.18:1969,51,0	1/1:9,14:23:66.23:2432,66,0	0/0:48,0:48:99:0,129,3227	0/0:21,0:21:57.20:0,57,1396	0/0:20,0:20:54.19:0,54,1418	0/0:22,0:22:63.22:0,63,1609	0/0:16,0:16:48.16:0,48,1237	0/0:30,0:30:75.26:0,75,1973	0/0:26,0:26:78.27:0,78,2010	0/0:33,0:33:99:0,99,2429	0/0:15,0:15:42.14:0,42,1089	0/0:27,0:27:78.27:0,78,2015	0/0:31,0:31:90.31:0,90,2326	0/0:21,0:21:60.18:0,60,1403	0/0:36,0:36:99:0,108,2725	0/0:34,0:34:90.29:0,90,2226	0/0:21,0:21:63.22:0,63,1589	0/0:28,0:28:84.29:0,84,2176	0/0:18,0:18:51.17:0,51,1343	0/0:27,0:27:78.27:0,78,2057	0/0:24,0:24:66.21:0,66,1615	0/0:26,0:26:72.23:0,72,1769	0/0:1,0:1:3.01:0,3,79
chr10	51234483	.	CAT	C	883.78	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.578;DP=955;FS=2.628;HRun=0;HaplotypeScore=125.9849;InbreedingCoeff=0.9999;MQ=79.73;MQ0=0;MQRankSum=-3.544;QD=25.99;ReadPosRankSum=1.039;VQSLOD=4.7226;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,31:34:69.23:979,69,0	0/0:14,0:14:36.11:0,36,607	0/0:37,0:38:93.68:0,94,1780	0/0:34,0:32:59.50:0,59,1246	0/0:37,0:37:99:0,108,1930	0/0:32,0:32:84.27:0,84,1494	0/0:26,0:26:66.20:0,66,1163	0/0:38,0:38:99:0,105,1792	0/0:28,0:28:81.28:0,81,1469	0/0:41,0:41:99:0,123,2194	0/0:24,0:24:66.23:0,66,1197	0/0:55,0:55:99:0,160,2816	0/0:49,0:49:99:0,147,2603	0/0:44,0:44:99:0,126,2226	0/0:52,0:52:99:0,150,2658	0/0:42,0:42:99:0,126,2201	0/0:29,0:29:87.26:0,87,1492	0/0:15,0:15:45.15:0,45,806	0/0:25,0:25:75.25:0,75,1334	0/0:41,0:41:99:0,114,2040	0/0:29,0:29:78.27:0,78,1396	0/0:40,0:40:99:0,114,2044	0/0:32,0:32:84.27:0,84,1506	0/0:22,0:22:63.22:0,63,1139	0/0:38,0:38:99:0,111,1896	0/0:34,0:34:99:0,102,1811	0/0:44,0:43:99:0,126,2232	0/0:18,0:18:50.60:0,51,870
chr10	51234744	.	T	TGAACACAC	2595.61	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=0.191;DP=921;FS=10.086;HRun=0;HaplotypeScore=230.4659;InbreedingCoeff=0.9957;MQ=77.15;MQ0=0;MQRankSum=-8.740;QD=58.99;ReadPosRankSum=-2.606;VQSLOD=1.6687;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:93.30:0,93,2323	0/0:7,0:7:18.06:0,18,488	0/0:34,0:35:72.24:0,72,1795	0/0:28,0:28:69.11:0,69,1486	0/0:24,0:24:60.19:0,60,1439	1/1:4,15:23:36.12:1325,36,0	1/1:9,9:21:39.13:1392,39,0	0/0:39,0:39:96.33:0,96,2433	0/0:42,0:42:99:0,114,2883	0/0:48,0:48:99:0,117,3070	0/0:19,0:19:51.16:0,51,1293	0/0:58,0:58:99:0,162,4137	0/0:48,0:48:99:0,120,3011	0/0:38,0:38:99:0,108,2845	0/0:42,0:42:99:0,110,2896	0/0:56,0:56:99:0,153,3792	0/0:20,0:20:54.16:0,54,1364	0/0:20,0:20:51.14:0,51,1308	0/0:17,0:17:42.14:0,42,1057	0/0:42,0:42:99:0,114,2932	0/0:47,0:47:99:0,120,3043	0/0:33,0:33:81.28:0,81,2163	0/0:32,0:32:86.84:0,87,2326	0/0:24,0:24:53.92:0,54,1348	0/0:28,0:28:69.22:0,69,1799	0/0:38,0:38:99:0,102,2562	0/0:38,0:38:99:0,102,2736	0/0:14,0:14:36.04:0,36,780
chr10	51235301	.	GGA	G	8034.72	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=18.114;DP=709;FS=11.020;HRun=0;HaplotypeScore=102.4627;InbreedingCoeff=0.9943;MQ=69.88;MQ0=1;MQRankSum=-5.688;QD=41.20;ReadPosRankSum=4.916;VQSLOD=6.4627;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:57:99:0,172,3215	1/1:0,7:7:21.07:328,21,0	0/0:22,0:22:66.22:0,66,1231	0/0:29,0:28:77.56:0,78,1506	0/0:24,0:24:72.25:0,72,1410	0/0:25,0:25:75.23:0,75,1429	0/0:24,0:24:72.23:0,72,1385	0/0:26,0:26:78.26:0,78,1494	0/0:19,0:19:57.18:0,57,1103	0/0:15,0:15:45.08:0,45,701	0/0:20,0:20:60.18:0,60,1097	1/1:0,30:30:81.28:1263,81,0	1/1:0,32:32:84.29:1311,84,0	0/0:33,0:33:99:0,99,1937	1/1:0,32:32:87.30:1359,87,0	1/1:0,24:24:63.08:984,63,0	0/0:30,0:30:84.27:0,84,1623	1/1:1,14:15:11.89:579,12,0	0/0:19,0:19:57.16:0,57,1047	0/0:21,0:21:63.19:0,63,1166	0/0:35,0:35:99:0,104,1995	1/1:1,18:18:48.16:749,48,0	1/1:2,11:13:39.05:573,39,0	1/1:0,23:23:57.19:890,57,0	0/0:32,0:32:90.29:0,90,1703	0/0:31,0:31:90.28:0,90,1659	0/0:42,0:42:99:0,126,2451	0/0:10,0:10:30.08:0,30,529
chr10	51235815	.	TA	T	1102.67	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.071;DP=675;FS=9.979;HRun=7;HaplotypeScore=65.1890;InbreedingCoeff=0.9991;MQ=66.17;MQ0=0;MQRankSum=-1.400;QD=19.35;ReadPosRankSum=-0.421;VQSLOD=2.3573;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:93.30:0,93,1170	0/0:19,0:19:48.15:0,48,604	0/0:22,0:22:54.05:0,54,604	0/0:15,0:14:30.10:0,30,378	0/0:23,0:23:57.18:0,57,717	1/1:5,19:24:48.10:490,48,0	1/1:5,28:33:72.16:735,72,0	0/0:20,0:20:60.17:0,60,732	0/0:22,0:22:57.17:0,57,706	0/0:22,0:22:63.20:0,63,793	0/0:24,0:24:54.17:0,54,680	0/0:26,0:26:75.23:0,75,926	0/0:31,0:31:78.25:0,78,981	0/0:14,0:14:39.11:0,39,476	0/0:33,0:33:93.29:0,93,1159	0/0:29,0:28:78.23:0,78,958	0/0:34,0:34:90.29:0,90,1132	0/0:29,0:29:81.26:0,81,1018	0/0:20,0:20:57.18:0,57,717	0/0:23,0:23:54.17:0,54,679	0/0:15,0:15:36.12:0,36,453	0/0:26,0:26:72.23:0,72,906	0/0:22,0:22:63.20:0,63,792	0/0:19,0:19:51.12:0,51,624	0/0:31,0:31:84.27:0,84,1056	0/0:21,0:21:63.20:0,63,793	0/0:36,0:36:99:0,102,1268	0/0:9,0:9:27.07:0,27,327
chr10	51236336	.	A	AG	11889.76	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=4.514;DP=770;FS=19.431;HRun=3;HaplotypeScore=88.4506;InbreedingCoeff=0.9956;MQ=78.69;MQ0=0;MQRankSum=-0.297;QD=37.63;ReadPosRankSum=2.737;VQSLOD=2.9838;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,49:53:99:1974,141,0	1/1:0,10:10:27.09:378,27,0	0/0:19,0:18:32.88:0,33,387	0/0:14,0:15:16.99:0,17,258	0/0:42,0:42:99:0,117,1392	1/1:0,22:22:57.19:798,57,0	1/1:1,26:27:69.23:966,69,0	0/0:33,0:33:90.27:0,90,1071	0/0:29,0:29:84.24:0,84,996	0/0:34,0:34:93.28:0,93,1116	0/0:22,0:22:66.19:0,66,781	1/1:1,32:33:93.31:1302,93,0	1/1:0,28:28:81.27:1134,81,0	0/0:37,0:37:99:0,108,1296	1/1:4,34:37:99:1429,102,0	1/1:2,20:22:21.18:720,21,0	0/0:26,0:26:72.21:0,72,853	1/1:0,20:20:60.20:840,60,0	0/0:23,0:23:63.19:0,63,756	0/0:32,0:32:93.28:0,93,1115	0/0:45,0:45:99:0,129,1547	1/1:0,24:24:66.22:924,66,0	1/1:0,20:20:56.98:793,57,0	1/1:2,17:19:45.15:630,45,0	0/0:23,0:23:63.19:0,63,756	0/0:37,0:37:99:0,108,1275	0/0:32,0:32:96.26:0,96,1126	0/0:5,0:5:15.05:0,15,180
chr10	51237560	.	CCTCTCTCTCTCTCTCTCTCTCTCT	C	1712.19	PASS	AB=0.867;AC=15;AF=0.313;AN=48;BaseQRankSum=5.780;DP=614;FS=29.574;HRun=0;HaplotypeScore=276.7660;InbreedingCoeff=0.4826;MQ=69.79;MQ0=40;MQRankSum=-1.644;QD=6.44;ReadPosRankSum=3.397;VQSLOD=1.3872;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:16:18.06:0,18,900	./.	./.	0/1:81,0:24:0:0,0,0	0/0:29,0:29:3.01:0,3,255	0/0:10,0:9:3.01:0,3,69	0/0:20,0:18:12.02:0,12,177	0/0:29,0:29:17.04:0,17,189	./.	0/0:20,0:20:21.07:0,21,1208	./.	1/1:17,0:18:6.02:208,6,0	1/1:10,12:22:2.81:186,3,0	0/0:19,0:18:19.42:0,19,1050	1/1:19,0:30:8.20:490,8,0	1/1:22,0:33:9.31:205,9,0	0/0:13,0:12:10.28:0,10,677	0/1:14,4:15:3.77:180,0,4	0/0:18,0:18:8.39:0,8,393	0/0:13,0:13:0.47:0,0,1	0/0:17,0:14:3.48:0,3,213	1/1:15,9:24:14.63:532,15,0	0/1:21,8:28:19.05:48,0,19	1/1:10,0:9:2.04:6,2,0	0/0:17,0:17:6.02:0,6,331	0/0:21,0:20:9.92:0,10,602	0/0:10,0:9:3.01:0,3,110	0/0:7,0:5:0.89:0,1,2
chr10	51238092	.	GAT	G	9205.55	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=14.359;DP=732;FS=10.868;HRun=0;HaplotypeScore=87.2586;InbreedingCoeff=0.9998;MQ=93.84;MQ0=2;MQRankSum=-3.431;QD=39.01;ReadPosRankSum=5.904;VQSLOD=6.0482;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,154,2864	1/1:0,15:15:42.14:617,42,0	0/0:36,0:36:99:0,102,1779	0/0:28,0:28:72.09:0,72,1233	0/0:18,0:18:51.17:0,51,954	0/0:18,0:18:51.16:0,51,924	0/0:23,0:23:66.23:0,66,1236	0/0:28,0:28:84.28:0,84,1536	0/0:26,0:26:75.22:0,75,1340	0/0:29,0:29:81.28:0,81,1496	0/0:9,0:9:27.05:0,27,398	1/1:1,18:19:48.16:707,48,0	1/1:0,31:31:87.29:1280,87,0	0/0:33,0:33:99:0,99,1786	1/1:1,42:42:99:1635,111,0	1/1:0,31:31:81.27:1193,81,0	0/0:32,0:32:93.28:0,93,1706	1/1:0,28:27:72.21:1037,72,0	0/0:25,0:25:69.21:0,69,1209	0/0:19,0:19:54.18:0,54,995	0/0:32,0:32:93.29:0,93,1694	1/1:1,15:16:39.13:574,39,0	1/1:0,12:12:33.11:485,33,0	1/1:0,41:41:99:1679,114,0	0/0:21,0:21:63.22:0,63,1180	0/0:22,0:22:63.22:0,63,1180	0/0:32,0:32:96.33:0,96,1769	0/0:14,0:14:42.14:0,42,786
chr10	51238783	.	T	TA	917.14	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-6.600;DP=575;FS=2.323;HRun=8;HaplotypeScore=64.3994;InbreedingCoeff=0.9960;MQ=76.13;MQ0=0;MQRankSum=-0.402;QD=25.48;ReadPosRankSum=1.064;VQSLOD=4.5364;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:51.02:0,51,463	0/0:12,0:12:36.01:0,36,325	0/0:16,0:16:24.11:0,24,251	0/0:13,0:14:24.01:0,24,218	0/0:27,0:27:72.03:0,72,659	1/1:4,21:25:60.18:692,60,0	1/1:0,11:11:30.09:346,30,0	0/0:32,0:32:74.51:0,75,660	0/0:13,0:14:38.05:0,38,335	0/0:24,0:24:62.97:0,63,560	0/0:26,0:26:63.01:0,63,569	0/0:11,0:11:30.02:0,30,275	0/0:25,0:25:72.04:0,72,658	0/0:12,0:12:24:0,24,220	0/0:17,0:17:51.03:0,51,467	0/0:17,0:17:44.98:0,45,398	0/0:18,0:18:48.01:0,48,433	0/0:17,0:17:45.02:0,45,408	0/0:24,0:24:66:0,66,596	0/0:35,0:35:90.03:0,90,820	0/0:13,0:13:36.02:0,36,329	0/0:24,0:24:60.01:0,60,542	0/0:28,0:28:66.02:0,66,604	0/0:12,0:12:33.02:0,33,302	0/0:28,0:28:75.03:0,75,682	0/0:28,0:28:78.03:0,78,710	0/0:29,0:29:75.02:0,75,686	0/0:16,0:17:47.06:0,47,418
chr10	51238836	.	A	AT	5771.69	PASS	AB=0.941;AC=19;AF=0.339;AN=56;BaseQRankSum=-13.602;DP=575;FS=1.581;HRun=4;HaplotypeScore=55.5025;InbreedingCoeff=0.9192;MQ=81.21;MQ0=0;MQRankSum=0.086;QD=33.56;ReadPosRankSum=2.760;VQSLOD=5.4697;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:96.23:0,96,1065	1/1:1,8:9:21.07:287,21,0	0/1:15,0:16:21.09:21,0,190	0/0:13,0:13:26.87:0,27,295	0/0:26,0:26:75.18:0,75,829	0/0:22,0:22:56.65:0,57,645	0/0:10,0:10:27.08:0,27,306	0/0:16,0:16:45.13:0,45,510	0/0:9,0:9:27.08:0,27,306	0/0:24,0:24:69.16:0,69,756	0/0:26,0:26:75.21:0,75,850	1/1:0,15:15:45.15:616,45,0	1/1:1,21:22:63.21:862,63,0	0/0:18,0:18:51.12:0,51,566	1/1:2,17:19:51.17:698,51,0	1/1:2,18:20:48.16:657,48,0	0/0:29,0:29:84.24:0,84,952	1/1:1,13:14:39.13:533,39,0	0/0:32,0:32:87.24:0,87,978	0/0:26,0:26:72.19:0,72,807	0/0:7,0:7:21.06:0,21,238	1/1:0,13:14:39.08:498,39,0	1/1:0,27:27:78.25:1067,78,0	1/1:3,13:16:39.13:534,39,0	0/0:26,0:26:72.20:0,72,817	0/0:27,0:27:75.21:0,75,851	0/0:44,0:44:99:0,129,1453	0/0:14,0:14:36.10:0,36,408
chr10	51239119	.	TTTG	T	1360.58	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=10.237;DP=763;FS=4.385;HRun=0;HaplotypeScore=125.9900;InbreedingCoeff=0.9268;MQ=70.71;MQ0=3;MQRankSum=-8.420;QD=19.16;ReadPosRankSum=-0.593;VQSLOD=3.3580;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:24:34.43:217,34,0	0/0:12,0:12:10.09:0,10,374	0/0:30,0:27:33.54:0,34,596	0/0:27,0:25:3.50:0,3,536	0/0:29,0:29:60.18:0,60,1174	1/1:9,18:27:63.13:834,63,0	1/1:11,9:20:18.12:450,18,0	0/0:39,0:39:49.71:0,50,1297	0/0:24,0:24:72.25:0,72,1450	0/0:31,0:31:63.21:0,63,1215	0/0:24,0:24:57.20:0,57,1125	0/0:41,0:41:99:0,99,1873	0/0:31,0:31:72.23:0,72,1371	0/0:33,0:33:63.19:0,63,1198	0/0:35,0:35:81.25:0,81,1549	0/0:19,0:19:48.16:0,48,939	0/0:25,0:25:54.19:0,54,1091	0/0:25,0:25:51.17:0,51,973	0/0:31,0:31:60.16:0,60,1062	0/0:34,0:34:87.30:0,87,1750	0/0:22,0:22:51.17:0,51,1007	0/0:25,0:25:45.15:0,45,909	0/0:20,0:20:51.18:0,51,1031	0/0:27,0:26:66.21:0,66,1292	0/0:29,0:29:63.20:0,63,1236	0/0:28,0:28:66.22:0,66,1263	0/0:29,0:29:78.27:0,78,1569	0/0:21,0:21:57.20:0,57,1116
chr10	51239149	.	C	CT	1900.89	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=4.158;DP=700;FS=8.150;HRun=8;HaplotypeScore=97.1933;InbreedingCoeff=0.8211;MQ=70.80;MQ0=3;MQRankSum=-6.784;QD=19.01;ReadPosRankSum=-3.264;VQSLOD=2.0622;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,24:30:65.86:721,66,0	0/0:7,0:7:18.01:0,18,165	0/0:20,0:19:7.90:0,8,105	0/1:23,0:18:13.31:13,0,87	0/0:26,0:26:69.02:0,69,631	1/1:2,23:25:69.21:796,69,0	1/1:4,16:20:45.13:519,45,0	0/0:35,1:36:61.33:0,61,793	0/0:26,0:26:69.02:0,69,627	0/0:27,0:27:75.04:0,75,686	0/0:20,0:21:52.63:0,53,435	0/0:30,0:30:80.97:0,81,719	0/0:28,0:28:72.04:0,72,659	0/0:27,0:27:69.01:0,69,627	0/0:28,0:28:37.41:0,37,593	0/0:18,0:18:45.02:0,45,412	0/0:23,0:23:57.03:0,57,522	0/0:20,0:20:54.03:0,54,494	0/0:27,0:26:66:0,66,593	0/0:38,0:38:99:0,102,921	0/0:21,0:21:56.97:0,57,505	0/0:20,0:20:57.02:0,57,522	0/0:25,0:25:62.94:0,63,561	0/0:25,0:24:69.01:0,69,626	0/0:23,0:23:60.03:0,60,549	0/0:29,0:29:81.03:0,81,738	0/0:34,0:33:99:0,99,900	0/0:19,0:19:51.03:0,51,467
chr10	51241809	.	AT	A	3651.36	PASS	AB=0.913;AC=19;AF=0.339;AN=56;BaseQRankSum=11.063;DP=545;FS=5.209;HRun=8;HaplotypeScore=55.2207;InbreedingCoeff=0.9514;MQ=74.94;MQ0=0;MQRankSum=-0.704;QD=22.54;ReadPosRankSum=2.118;VQSLOD=4.2005;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:2,0:20:48.88:0,49,249	1/1:0,15:15:39.06:377,39,0	0/0:14,0:14:35.47:0,35,392	0/0:11,0:11:22.58:0,23,249	0/0:35,0:35:99:0,102,1222	0/0:20,1:23:33.95:0,34,653	0/0:9,0:9:24.07:0,24,290	0/0:35,0:35:93.29:0,93,1123	0/0:18,0:18:54.15:0,54,641	0/0:23,0:23:57.17:0,57,680	0/0:20,0:20:48.15:0,48,580	1/1:0,17:17:48.08:464,48,0	1/1:1,16:17:48.08:464,48,0	0/0:24,1:25:40.23:0,40,768	1/1:1,19:20:54.09:522,54,0	1/1:1,21:22:63.10:608,63,0	0/1:19,2:21:0.79:1,0,547	1/1:3,7:10:18.02:174,18,0	0/0:19,0:19:48.15:0,48,580	0/0:25,0:25:69.20:0,69,823	0/0:10,0:10:21.06:0,21,254	1/1:1,9:10:21.03:203,21,0	1/1:0,19:19:54.09:522,54,0	1/1:0,11:11:33.05:319,33,0	0/0:27,0:27:72.21:0,72,860	0/0:24,0:24:69.21:0,69,834	0/0:37,0:37:99:0,99,1167	0/0:8,0:8:18.06:0,18,217
chr10	51242383	.	CTTTAAGCAT	C	4326.15	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=11.049;DP=562;FS=4.327;HRun=0;HaplotypeScore=149.7569;InbreedingCoeff=0.9972;MQ=97.56;MQ0=0;MQRankSum=-11.016;QD=60.93;ReadPosRankSum=1.371;VQSLOD=4.8632;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,24:28:51.17:1511,51,0	0/0:7,0:7:21.07:0,21,798	0/0:28,0:28:66.17:0,66,2845	0/0:30,0:30:66.63:0,67,3331	0/0:14,0:14:42.14:0,42,1789	1/1:2,19:21:51.17:1559,51,0	1/1:2,20:22:42.14:1256,42,0	0/0:35,0:35:99:0,99,4027	0/0:22,0:22:66.21:0,66,2908	0/0:35,0:35:99:0,105,4849	0/0:10,0:10:30.10:0,30,1409	0/0:15,0:15:45.15:0,45,2072	0/0:20,0:20:57.20:0,57,2588	0/0:19,0:19:51.18:0,51,2387	0/0:27,0:27:81.28:0,81,3657	0/0:18,0:18:54.19:0,54,2613	0/0:20,0:20:60.21:0,60,2837	0/0:17,0:17:48.16:0,48,2142	0/0:23,0:23:60.20:0,60,2591	0/0:10,0:10:30.10:0,30,1441	0/0:20,0:20:60.19:0,60,2765	0/0:12,0:12:36.12:0,36,1658	0/0:10,0:10:30.05:0,30,1142	0/0:8,0:8:24.04:0,24,1037	0/0:20,0:20:60.21:0,60,2765	0/0:24,0:24:69.24:0,69,3121	0/0:27,0:27:81.28:0,81,3809	0/0:20,0:20:60.21:0,60,2943
chr10	51242633	.	AAT	A	1003.01	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=7.811;DP=287;FS=4.758;HRun=0;HaplotypeScore=36.7184;InbreedingCoeff=0.8279;MQ=73.18;MQ0=0;MQRankSum=1.428;QD=19.29;ReadPosRankSum=2.308;VQSLOD=2.8924;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:33.11:0,33,556	1/1:2,3:5:9.03:116,9,0	0/0:8,0:8:3.48:0,3,12	0/0:3,0:2:3.01:0,3,31	0/0:14,0:14:36.11:0,36,561	0/0:16,0:16:36.11:0,36,580	0/0:8,0:8:18.06:0,18,288	0/0:31,0:31:72.23:0,72,1156	0/0:6,0:6:15.05:0,15,245	0/0:12,0:12:21.07:0,21,353	0/0:10,0:10:18.06:0,18,300	1/1:1,6:7:9.03:116,9,0	1/1:1,7:8:18.06:231,18,0	0/0:1,0:5:12.01:0,12,107	1/1:1,7:8:18.06:232,18,0	1/1:2,4:6:6.02:77,6,0	0/0:21,0:21:51.17:0,51,856	1/1:1,4:5:12.04:154,12,0	0/0:24,0:24:69.22:0,69,1116	0/0:8,0:8:12.04:0,12,195	0/0:2,0:2:6:0,6,74	1/1:4,0:4:9.03:115,9,0	1/1:2,4:6:9.03:116,9,0	1/1:1,2:3:3.01:39,3,0	0/0:11,0:11:27.07:0,27,418	0/0:9,0:9:27.09:0,27,449	0/0:9,0:8:18.06:0,18,294	0/0:22,0:22:57.19:0,57,937
chr10	51243305	.	G	GGTTT	3078.96	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=2.412;DP=520;FS=15.500;HRun=0;HaplotypeScore=100.0133;InbreedingCoeff=0.9807;MQ=74.93;MQ0=0;MQRankSum=-5.734;QD=22.81;ReadPosRankSum=1.758;VQSLOD=2.6008;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:57.16:0,57,762	1/1:7,1:8:11.98:205,12,0	0/0:22,0:17:26.11:0,26,274	0/0:14,0:11:20.11:0,20,225	0/0:27,0:27:56.92:0,57,783	0/0:21,0:21:51.15:0,51,670	0/0:14,0:14:33.07:0,33,415	0/0:29,0:29:63.10:0,63,835	0/0:19,0:19:54.15:0,54,895	0/0:13,0:13:33.10:0,33,556	0/0:11,0:11:29.96:0,30,438	1/1:13,1:14:26.15:339,26,0	1/1:16,1:17:16.28:275,16,0	0/0:16,0:16:30.08:0,30,453	1/1:11,1:12:18.05:328,18,0	1/1:19,3:22:30.10:597,30,0	0/0:24,0:24:69.17:0,69,1083	1/1:16,1:17:30.10:571,30,0	0/0:23,0:23:59.85:0,60,751	0/0:19,0:19:51.10:0,51,807	0/0:29,0:29:69.11:0,69,939	1/1:3,1:4:9.03:168,9,0	1/1:16,0:17:26.63:382,27,0	1/1:24,0:24:24.07:425,24,0	0/0:16,0:16:42.93:0,43,581	0/0:25,0:25:66.20:0,66,1083	0/0:21,0:21:54:0,54,738	0/0:16,0:16:43.58:0,44,610
chr10	51243306	.	G	GTTTGT	4247.68	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-2.669;DP=554;FS=22.476;HRun=0;HaplotypeScore=117.5175;InbreedingCoeff=0.9827;MQ=74.71;MQ0=0;MQRankSum=-5.760;QD=26.38;ReadPosRankSum=1.378;VQSLOD=3.0837;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:26:57.16:0,57,870	1/1:2,1:8:11.98:227,12,0	0/0:24,0:18:29.04:0,29,312	0/0:13,0:11:22.97:0,23,236	0/0:25,0:27:58.79:0,59,846	0/0:4,0:21:51.15:0,51,756	0/0:3,0:14:33.07:0,33,468	0/0:27,0:29:65.95:0,66,925	0/0:19,0:19:54.10:0,54,994	0/0:12,0:12:33.02:0,33,611	0/0:12,0:13:32.83:0,33,509	1/1:7,1:14:26.15:379,26,0	1/1:5,12:23:22.31:430,22,0	0/0:14,0:14:32.97:0,33,516	1/1:4,8:16:18.05:395,18,0	1/1:5,15:26:30.09:692,30,0	0/0:23,0:25:69.15:0,69,1216	1/1:4,12:20:36.06:833,36,0	0/0:23,0:24:37.36:0,37,759	0/0:18,0:19:51.05:0,51,900	0/0:29,0:30:74.93:0,75,1063	1/1:1,3:5:9.03:175,9,0	1/1:3,14:22:26.96:526,27,0	1/1:4,21:27:24.06:592,24,0	0/0:13,0:17:42.88:0,43,640	0/0:23,0:25:66.11:0,66,1208	0/0:20,0:23:56.83:0,57,835	0/0:13,0:16:35.38:0,35,652
chr10	51244822	.	AC	A	1510.37	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.489;DP=759;FS=1.817;HRun=5;HaplotypeScore=68.9801;InbreedingCoeff=0.9999;MQ=76.87;MQ0=0;MQRankSum=-0.409;QD=26.97;ReadPosRankSum=1.800;VQSLOD=3.5563;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,120,1622	0/0:16,0:16:39.11:0,39,516	0/0:28,0:28:51.91:0,52,924	0/0:19,0:19:42.10:0,42,543	0/0:27,0:27:81.26:0,81,1089	1/1:1,33:34:87.25:986,87,0	1/1:0,22:22:57.16:646,57,0	0/0:27,0:27:75.24:0,75,999	0/0:18,0:18:54.18:0,54,737	0/0:34,0:34:93.28:0,93,1217	0/0:19,0:19:51.16:0,51,681	0/0:24,0:24:72.23:0,72,965	0/0:30,0:30:84.19:0,84,1092	0/0:21,0:21:60.18:0,60,803	0/0:32,0:32:96.29:0,96,1278	0/0:24,0:24:72.24:0,72,982	0/0:26,0:26:78.15:0,78,1037	0/0:22,0:22:63.20:0,63,844	0/0:33,0:33:93.31:0,93,1262	0/0:21,0:21:63.20:0,63,844	0/0:22,0:22:66.21:0,66,885	0/0:30,0:30:78.20:0,78,1029	0/0:25,0:25:75.20:0,75,997	0/0:23,0:23:66.22:0,66,902	0/0:32,0:32:96.30:0,96,1284	0/0:37,0:37:99:0,102,1348	0/0:49,0:48:99:0,144,1908	0/0:22,0:22:66.22:0,66,902
chr10	51245408	.	T	TTTA	5799.79	PASS	AB=0.765;AC=20;AF=0.357;AN=56;BaseQRankSum=5.230;DP=759;FS=12.546;HRun=0;HaplotypeScore=123.8564;InbreedingCoeff=0.8310;MQ=74.64;MQ0=0;MQRankSum=-3.725;QD=19.27;ReadPosRankSum=2.584;VQSLOD=3.8847;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:4,0:35:2.77:103,0,3	1/1:1,10:13:25.19:432,25,0	0/0:16,0:15:44.65:0,45,480	0/0:14,0:14:12.42:0,12,147	0/0:30,0:30:74.62:0,75,910	0/1:28,0:28:89.15:89,0,121	0/0:21,0:21:0.28:0,0,113	0/0:41,0:41:99:0,111,1315	0/0:30,0:30:78.02:0,78,1029	0/0:27,0:28:74.70:0,75,880	0/0:21,0:21:44.71:0,45,552	1/1:1,0:29:19.69:482,20,0	1/1:2,1:39:72.48:791,72,0	0/0:37,0:37:99:0,100,1285	1/1:2,33:41:62.87:1182,63,0	1/1:1,18:22:42.09:824,42,0	0/0:25,0:25:74.72:0,75,940	1/1:0,0:13:26.73:261,27,0	0/0:22,0:22:65.60:0,66,796	0/0:30,0:30:62.83:0,63,1061	0/0:26,0:26:75.08:0,75,953	1/1:1,2:35:76.94:907,77,0	1/1:0,0:27:42.22:474,42,0	1/1:1,0:19:24.53:256,25,0	0/0:29,0:29:81.01:0,81,1067	0/0:43,0:43:99:0,114,1361	0/0:31,0:31:93.20:0,93,1249	0/0:13,0:13:39.12:0,39,570
chr10	51247658	.	CT	C	4577.78	PASS	AB=0.950;AC=26;AF=0.464;AN=56;BaseQRankSum=11.201;DP=640;FS=5.632;HRun=11;HaplotypeScore=75.2439;InbreedingCoeff=0.8774;MQ=78.65;MQ0=0;MQRankSum=-5.230;QD=15.95;ReadPosRankSum=2.962;VQSLOD=5.8451;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,19:21:50.94:419,51,0	1/1:1,9:10:26.97:222,27,0	0/1:18,1:20:8.24:8,0,192	0/1:17,1:18:5.01:5,0,271	0/0:37,1:39:71.59:0,72,960	1/1:5,20:25:59.92:493,60,0	1/1:2,16:18:47.94:394,48,0	0/0:29,0:31:40.34:0,40,565	0/0:17,0:17:42.08:0,42,434	0/0:28,0:28:60.11:0,60,621	0/0:24,0:24:44.05:0,44,566	1/1:5,29:34:42.92:559,43,0	1/1:3,16:19:38.94:320,39,0	0/0:23,0:23:54.08:0,54,550	1/1:6,19:25:24.94:411,25,0	1/1:4,22:26:59.91:493,60,0	0/0:18,0:19:51.79:0,52,507	1/1:5,8:13:23.96:197,24,0	0/0:16,1:17:12.64:0,13,413	0/0:29,2:31:31.90:0,32,743	0/0:24,0:24:57.11:0,57,589	1/1:3,24:27:65.80:534,66,0	1/1:3,20:23:26.69:370,27,0	1/1:0,7:8:20.02:154,20,0	0/0:18,0:18:45.07:0,45,465	0/0:37,0:38:81.01:0,81,822	0/0:26,0:26:69.17:0,69,735	0/0:18,0:18:39.06:0,39,399
chr10	51248108	.	ATGTGTGTGTGTG	A	310.33	PASS	AB=0.960;AC=10;AF=0.200;AN=50;BaseQRankSum=4.003;DP=545;FS=2.292;HRun=0;HaplotypeScore=177.1154;InbreedingCoeff=0.4315;MQ=65.50;MQ0=8;MQRankSum=-1.475;QD=2.37;ReadPosRankSum=-0.530;VQSLOD=2.9228;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:15.04:0,15,257	./.	./.	./.	0/0:9,0:8:9.03:0,9,284	0/0:17,0:17:12.04:0,12,191	0/0:17,0:19:6.48:0,6,73	0/0:29,0:29:5.93:0,6,46	0/0:27,0:27:11.88:0,12,393	0/0:16,0:14:6.49:0,6,195	0/0:8,0:8:15.05:0,15,492	1/1:18,0:18:9:204,9,0	0/1:21,0:23:24.06:24,0,183	0/0:19,0:19:21.07:0,21,683	1/1:18,2:19:2.97:20,3,0	0/1:21,0:21:0:0,0,0	0/0:24,0:23:16.30:0,16,534	1/1:17,2:18:3:102,3,0	0/0:23,0:23:6.01:0,6,75	0/0:8,0:8:3.01:0,3,77	0/0:39,0:37:3.01:0,3,48	0/0:19,0:18:0.47:0,0,1	0/0:12,0:12:0.47:0,0,1	1/1:30,0:29:2.51:83,3,0	0/0:19,0:19:6.02:0,6,96	0/0:23,0:23:15.94:0,16,592	0/0:11,0:11:6.02:0,6,110	0/0:6,0:6:7.84:0,8,248
chr10	51251117	.	G	GGT	2232.02	PASS	AB=0.561;AC=5;AF=0.089;AN=56;BaseQRankSum=-9.239;DP=703;FS=1.846;HRun=0;HaplotypeScore=82.3178;InbreedingCoeff=0.7804;MQ=69.12;MQ0=2;MQRankSum=-1.732;QD=26.26;ReadPosRankSum=0.414;VQSLOD=4.5160;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,29:32:45.95:927,46,0	0/0:9,0:9:21.04:0,21,227	0/0:32,0:18:38.77:0,39,442	0/0:28,0:22:22.97:0,23,285	0/0:23,0:23:63.16:0,63,750	0/1:5,17:23:19.99:642,0,20	1/1:6,24:30:48.16:793,48,0	0/0:35,0:35:81.20:0,81,935	0/0:15,0:15:33.09:0,33,400	0/0:26,0:26:56.82:0,57,645	0/0:22,0:22:60.18:0,60,738	0/0:28,0:28:68.97:0,69,822	0/0:31,0:32:87.06:0,87,1014	0/0:25,0:25:60.18:0,60,740	0/0:26,0:26:66.21:0,66,825	0/0:21,0:21:63.18:0,63,763	0/0:45,0:45:99:0,111,1279	0/0:25,0:25:63.15:0,63,756	0/0:20,0:20:41:0,41,387	0/0:19,0:20:53.88:0,54,557	0/0:32,0:31:71.40:0,71,831	0/0:26,0:26:66.15:0,66,773	0/0:26,0:26:69.17:0,69,834	0/0:20,0:20:51.13:0,51,611	0/0:18,0:18:45.14:0,45,563	0/0:25,0:25:51.16:0,51,628	0/0:28,0:28:75.71:0,76,919	0/0:11,0:11:33.09:0,33,400
chr10	51252083	.	ATC	A	7239.65	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=14.881;DP=634;FS=4.024;HRun=0;HaplotypeScore=75.0250;InbreedingCoeff=0.9996;MQ=82.26;MQ0=1;MQRankSum=-1.353;QD=44.14;ReadPosRankSum=3.296;VQSLOD=6.6985;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:51.18:0,51,1036	1/1:0,14:14:39.13:637,39,0	0/0:21,0:21:63.22:0,63,1249	0/0:13,0:13:39.11:0,39,697	0/0:33,0:33:96.33:0,96,1951	0/0:36,0:36:99:0,108,2194	0/0:13,0:13:39.13:0,39,778	0/0:41,0:41:99:0,123,2480	0/0:29,0:29:87.30:0,87,1756	0/0:27,0:27:81.27:0,81,1602	0/0:19,0:19:57.20:0,57,1136	1/1:0,21:21:57.19:930,57,0	1/1:0,22:22:60.20:980,60,0	0/0:30,0:30:90.31:0,90,1821	1/1:0,25:25:69.24:1126,69,0	1/1:0,20:19:45.15:734,45,0	0/0:17,0:17:48.16:0,48,974	1/1:0,11:11:33.11:532,33,0	0/0:22,0:22:63.20:0,63,1212	0/0:38,0:38:99:0,114,2276	0/0:15,0:15:45.15:0,45,914	1/1:0,21:21:57.19:930,57,0	1/1:0,18:18:51.17:832,51,0	1/1:0,12:12:33.11:539,33,0	0/0:26,0:25:78.26:0,78,1525	0/0:25,0:25:75.26:0,75,1515	0/0:40,0:40:99:0,120,2389	0/0:8,0:8:24.08:0,24,488
chr10	51254054	.	AG	A	974.81	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.800;DP=640;FS=0.000;HRun=6;HaplotypeScore=58.9965;InbreedingCoeff=0.9871;MQ=90.39;MQ0=0;MQRankSum=-4.995;QD=24.37;ReadPosRankSum=-0.822;VQSLOD=2.7811;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:72.23:0,72,947	0/0:6,0:6:18.06:0,18,237	0/0:22,0:22:57.14:0,57,718	0/0:29,0:29:75.20:0,75,955	0/0:11,0:11:33.11:0,33,433	1/1:0,22:22:54.14:580,54,0	1/1:2,16:18:48.12:516,48,0	0/0:35,0:35:87.21:0,87,1088	0/0:22,0:22:63.20:0,63,829	0/0:23,0:23:66.19:0,66,838	0/0:15,0:15:42.12:0,42,536	0/0:18,0:18:45.12:0,45,574	0/0:32,0:32:90.25:0,90,1164	0/0:28,0:28:84.27:0,84,1103	0/0:34,0:34:99:0,99,1289	0/0:23,0:23:66.16:0,66,836	0/0:26,0:26:75.19:0,75,952	0/0:23,0:23:66.20:0,66,853	0/0:27,0:27:69.21:0,69,886	0/0:22,0:22:63.20:0,63,828	0/0:41,0:41:99:0,120,1548	0/0:10,0:10:27.09:0,27,355	0/0:22,0:22:60.19:0,60,785	0/0:31,0:31:90.29:0,90,1184	0/0:20,0:20:57.18:0,57,737	0/0:23,0:23:63.20:0,63,816	0/0:24,0:24:72.23:0,72,947	0/0:5,0:5:15.03:0,15,181
chr10	51255114	.	CATA	C	686.62	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.232;DP=732;FS=15.746;HRun=0;HaplotypeScore=99.5745;InbreedingCoeff=0.9998;MQ=87.23;MQ0=0;MQRankSum=-3.167;QD=32.70;ReadPosRankSum=1.456;VQSLOD=2.9854;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,21:21:42.14:781,42,0	0/0:15,0:15:45.15:0,45,1085	0/0:24,0:24:69.24:0,69,1649	0/0:26,0:26:72.16:0,72,1574	0/0:27,0:27:81.25:0,81,1863	0/0:37,0:37:99:0,105,2587	0/0:15,0:15:45.14:0,45,1051	0/0:42,0:42:99:0,126,2775	0/0:25,0:25:75.26:0,75,1848	0/0:31,0:31:93.30:0,93,2148	0/0:34,0:34:99:0,102,2413	0/0:26,0:26:78.27:0,78,1922	0/0:33,0:33:99:0,99,2378	0/0:30,0:30:90.30:0,90,2071	0/0:32,0:32:96.33:0,96,2341	0/0:27,0:27:78.25:0,78,1849	0/0:18,0:18:54.19:0,54,1322	0/0:14,0:14:39.13:0,39,961	0/0:31,0:31:90.30:0,90,2100	0/0:34,0:34:99:0,102,2458	0/0:27,0:27:81.26:0,81,1906	0/0:27,0:27:78.20:0,78,1764	0/0:21,0:21:60.19:0,60,1428	0/0:15,0:15:45.15:0,45,1109	0/0:23,0:23:69.21:0,69,1583	0/0:33,0:33:99:0,99,2258	0/0:31,0:31:93.32:0,93,2264	0/0:13,0:13:39.13:0,39,925
chr10	51255483	.	GA	G	1355.17	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=8.254;DP=819;FS=16.442;HRun=3;HaplotypeScore=82.3344;InbreedingCoeff=0.9993;MQ=68.18;MQ0=0;MQRankSum=0.512;QD=30.11;ReadPosRankSum=1.280;VQSLOD=2.0241;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,43:45:99:1450,117,0	0/0:16,0:16:45.14:0,45,622	0/0:18,0:18:36.11:0,36,600	0/0:15,0:15:32.39:0,32,365	0/0:37,0:37:99:0,111,1555	0/0:26,0:26:78.26:0,78,1123	0/0:27,0:27:81.25:0,81,1130	0/0:32,0:32:93.30:0,93,1309	0/0:27,0:27:81.25:0,81,1128	0/0:37,0:37:99:0,108,1513	0/0:31,0:31:90.30:0,90,1293	0/0:33,0:33:93.31:0,93,1339	0/0:31,0:31:90.06:0,90,1296	0/0:36,0:36:99:0,108,1520	0/0:32,0:32:93.31:0,93,1338	0/0:27,0:27:75.23:0,75,1046	0/0:26,0:26:78.22:0,78,1096	0/0:13,0:13:33.11:0,33,468	0/0:26,0:26:75.23:0,75,1047	0/0:35,0:35:99:0,99,1407	0/0:18,0:18:51.17:0,51,734	0/0:39,0:39:99:0,117,1661	0/0:30,0:30:84.28:0,84,1204	0/0:21,0:21:57.17:0,57,785	0/0:23,0:23:69.20:0,69,934	0/0:52,0:52:99:0,156,2187	0/0:52,0:52:99:0,147,2082	0/0:14,0:14:42.14:0,42,605
chr10	51255579	.	AG	A	9936.14	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=13.313;DP=775;FS=3.646;HRun=1;HaplotypeScore=78.3861;InbreedingCoeff=0.9998;MQ=63.38;MQ0=0;MQRankSum=-1.474;QD=39.90;ReadPosRankSum=6.372;VQSLOD=5.0001;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,105,1578	1/1:0,12:12:33.11:462,33,0	0/0:32,0:30:84.26:0,84,1267	0/0:25,0:24:71.60:0,72,1084	0/0:29,0:29:87.30:0,87,1384	0/0:15,0:15:45.15:0,45,717	0/0:19,0:19:54.18:0,54,863	0/0:40,0:39:99:0,120,1871	0/0:29,0:29:87.30:0,87,1391	0/0:25,0:25:72.25:0,72,1150	0/0:15,0:15:45.13:0,45,673	1/1:1,35:36:99:1417,102,0	1/1:0,30:30:87.28:1217,87,0	0/0:22,1:23:27.26:0,27,1011	1/1:0,32:32:93.31:1301,93,0	1/1:0,37:37:99:1553,111,0	0/0:34,0:34:99:0,99,1557	1/1:0,25:25:69.23:965,69,0	0/0:21,0:21:63.20:0,63,985	0/0:33,0:33:90.28:0,90,1403	0/0:33,0:33:99:0,99,1559	1/1:0,25:25:69.23:965,69,0	1/1:0,28:28:81.27:1133,81,0	1/1:0,24:24:66.22:923,66,0	0/0:30,0:30:86.85:0,87,1368	0/0:31,0:31:93.32:0,93,1477	0/0:41,0:41:99:0,123,1900	0/0:13,0:13:39.13:0,39,623
chr10	51256239	.	G	GTAAC	861.95	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=1.716;DP=558;FS=3.537;HRun=0;HaplotypeScore=102.8518;InbreedingCoeff=0.9173;MQ=90.82;MQ0=3;MQRankSum=-2.722;QD=43.10;ReadPosRankSum=0.751;VQSLOD=3.6928;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,17:19:39.12:957,39,0	0/0:6,0:6:15.05:0,15,273	0/0:28,0:28:68.03:0,68,1174	0/0:29,0:27:59.69:0,60,904	0/0:20,0:18:42.14:0,42,763	0/0:9,0:9:24.08:0,24,434	0/0:13,0:11:30.09:0,30,516	0/0:29,0:13:27.08:0,27,453	0/0:21,0:15:30.09:0,30,540	0/0:30,0:22:51.15:0,51,857	0/0:14,0:14:36.04:0,36,617	0/0:12,0:10:21.07:0,21,381	0/0:11,0:11:23.98:0,24,436	0/0:33,0:21:33.11:0,33,599	0/0:15,0:15:39.12:0,39,679	0/0:25,0:25:66.16:0,66,1153	0/0:32,0:23:41.98:0,42,731	0/0:14,0:14:36.12:0,36,652	0/0:20,0:13:39.08:0,39,652	0/0:15,0:15:42.14:0,42,763	0/0:39,0:30:51.08:0,51,859	0/0:18,0:18:45.09:0,45,780	0/0:10,0:10:23.97:0,24,379	0/0:15,0:15:33.03:0,33,562	0/0:19,0:19:32.82:0,33,572	0/0:42,0:34:96.28:0,96,1657	0/0:13,0:8:18.06:0,18,327	0/0:6,0:4:9.50:0,10,165
chr10	51257484	.	A	AAAAT	1210.11	PASS	AB=0.900;AC=18;AF=0.333;AN=54;BaseQRankSum=7.848;DP=344;FS=7.250;HRun=0;HaplotypeScore=57.7426;InbreedingCoeff=0.5014;MQ=67.38;MQ0=0;MQRankSum=-0.510;QD=12.22;ReadPosRankSum=0.457;VQSLOD=1.7882;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:13,0:13:92.11:92,0,189	1/1:7,0:7:8.97:80,9,0	0/0:6,0:5:8.99:0,9,99	./.	0/0:14,0:14:18.04:0,18,247	0/1:19,0:19:99:103,0,206	0/0:8,0:8:2.30:0,2,190	0/0:23,0:23:51.16:0,51,799	0/0:12,0:12:21.05:0,21,325	0/0:11,0:11:24.05:0,24,315	0/0:21,0:21:45.13:0,45,698	1/1:3,2:5:6.02:141,6,0	1/1:3,0:3:3.01:46,3,0	0/0:14,0:14:27.09:0,27,454	1/1:7,0:9:12.03:188,12,0	1/1:3,0:7:3.01:52,3,0	0/0:23,0:23:48.12:0,48,763	0/1:6,11:18:7.65:468,0,8	0/0:12,0:12:30.10:0,30,479	0/0:12,0:12:27.08:0,27,422	0/0:11,0:11:27.07:0,27,417	1/1:6,1:7:3.01:70,3,0	0/1:6,0:6:19.98:20,0,24	1/1:4,1:5:9.01:123,9,0	0/0:18,0:18:45.13:0,45,707	0/0:17,0:17:48.15:0,48,792	0/0:25,0:25:60.15:0,60,929	0/0:11,0:11:30.03:0,30,420
chr10	51257497	.	G	GAATA	2004.89	PASS	AB=1.000;AC=22;AF=0.423;AN=52;BaseQRankSum=0.953;DP=292;FS=18.956;HRun=0;HaplotypeScore=48.5110;InbreedingCoeff=0.6712;MQ=63.36;MQ0=0;MQRankSum=0.424;QD=21.56;ReadPosRankSum=2.660;VQSLOD=1.0550;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,6:12:18.06:430,18,0	1/1:4,0:4:5.98:55,6,0	./.	./.	0/0:7,0:7:9.03:0,9,140	1/1:6,12:18:21.07:502,21,0	1/1:7,1:8:6.02:140,6,0	0/0:21,0:21:11.95:0,12,115	0/0:6,0:6:9.03:0,9,143	0/0:10,0:10:12.04:0,12,190	0/0:16,0:16:18.06:0,18,274	1/1:4,0:4:6.02:141,6,0	1/1:6,0:6:9.02:101,9,0	0/0:10,0:10:18.06:0,18,283	1/1:6,0:6:6.02:104,6,0	1/1:5,0:5:3.01:52,3,0	0/0:21,0:21:51.12:0,51,765	0/1:20,0:20:1.26:502,0,1	0/0:11,0:11:9.02:0,9,123	0/0:11,0:11:15.04:0,15,212	0/0:9,0:9:9.03:0,9,143	1/1:2,0:2:3.01:70,3,0	0/1:4,0:4:19.89:20,0,24	1/1:4,0:4:3.01:70,3,0	0/0:15,0:15:27.08:0,27,405	0/0:18,0:18:30.09:0,30,455	0/0:21,0:21:42.14:0,42,653	0/0:14,0:14:27.03:0,27,337
chr10	51257629	.	GGGAA	G	749.02	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=1.950;DP=485;FS=6.758;HRun=0;HaplotypeScore=104.2818;InbreedingCoeff=0.7794;MQ=63.75;MQ0=5;MQRankSum=-0.394;QD=28.81;ReadPosRankSum=0.768;VQSLOD=2.8421;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,19:25:21.27:841,21,0	0/0:3,0:3:3.01:0,3,53	0/0:34,0:16:26.60:0,27,468	0/0:29,0:17:10.47:0,10,560	0/0:21,0:21:45.12:0,45,1035	0/0:21,0:21:51.17:0,51,955	0/0:12,0:13:33.08:0,33,556	0/0:17,0:17:12.49:0,12,927	0/0:9,0:9:21.05:0,21,479	0/0:10,0:10:21.06:0,21,483	0/0:12,0:12:27.08:0,27,632	0/0:13,0:13:30.08:0,30,473	0/0:23,0:23:47.82:0,48,799	0/0:27,0:27:57.20:0,57,1392	0/0:17,0:17:42.14:0,42,749	0/0:10,0:10:20.81:0,21,329	0/0:22,0:22:57.18:0,57,1371	0/0:22,0:22:53.34:0,53,891	0/0:15,0:15:36.11:0,36,804	0/0:18,0:18:39.12:0,39,883	0/0:25,0:25:54.13:0,54,1263	0/0:8,0:8:21.07:0,21,366	0/0:10,0:10:21.07:0,21,370	0/0:19,0:19:48.11:0,48,827	0/0:14,0:14:39.13:0,39,979	0/0:19,0:19:45.15:0,45,1090	0/0:21,0:21:54.19:0,54,1337	0/0:7,0:7:21.05:0,21,462
chr10	51258243	.	TC	T	1517.25	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=8.531;DP=796;FS=1.775;HRun=6;HaplotypeScore=74.6987;InbreedingCoeff=0.9989;MQ=88.16;MQ0=0;MQRankSum=-4.027;QD=26.16;ReadPosRankSum=2.154;VQSLOD=4.2220;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,53:58:99:1612,150,0	0/0:14,0:14:42.14:0,42,552	0/0:30,0:30:75.17:0,75,930	0/0:26,0:26:40.77:0,41,611	0/0:35,0:35:99:0,99,1288	0/0:24,0:24:72.23:0,72,947	0/0:27,0:27:72.22:0,72,932	0/0:40,0:40:99:0,117,1502	0/0:36,0:36:99:0,99,1260	0/0:33,0:33:87.27:0,87,1127	0/0:28,0:28:81.23:0,81,1035	0/0:28,0:28:78.25:0,78,1019	0/0:33,0:33:96.31:0,96,1261	0/0:23,0:23:66.20:0,66,854	0/0:40,0:40:99:0,111,1405	0/0:31,0:31:84.27:0,84,1105	0/0:26,0:26:78.25:0,78,1026	0/0:10,0:10:27.09:0,27,355	0/0:24,0:24:66.20:0,66,851	0/0:32,0:32:96.28:0,96,1233	0/0:17,0:17:48.16:0,48,632	0/0:26,0:26:72.23:0,72,946	0/0:30,0:30:87.27:0,87,1129	0/0:19,0:19:54.18:0,54,709	0/0:26,0:26:78.24:0,78,1011	0/0:26,0:26:78.22:0,78,985	0/0:39,0:37:99:0,114,1496	0/0:15,0:15:45.14:0,45,586
chr10	51258871	.	C	CAAAACAAA	9746.05	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-5.185;DP=720;FS=0.430;HRun=0;HaplotypeScore=157.6078;InbreedingCoeff=0.9750;MQ=61.87;MQ0=2;MQRankSum=-11.862;QD=36.37;ReadPosRankSum=1.576;VQSLOD=4.1461;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:41:86.69:0,87,2202	1/1:6,9:17:12.04:407,12,0	0/0:30,0:22:22.27:0,22,525	0/0:31,0:19:7.91:0,8,301	0/0:40,0:40:99:0,99,2130	1/1:4,0:23:27.09:921,27,0	1/1:3,0:24:15.05:512,15,0	0/0:21,0:21:32.33:0,32,640	0/0:27,0:27:69.21:0,69,1565	0/0:21,0:21:51.15:0,51,1110	0/0:26,0:26:54.18:0,54,1222	1/1:1,23:25:36.12:1485,36,0	1/1:5,16:24:21.07:862,21,0	0/0:20,0:20:51.16:0,51,1123	1/1:11,20:33:23.96:991,24,0	1/1:7,12:22:21.07:866,21,0	0/0:21,0:21:48.16:0,48,1110	1/1:6,13:20:18.53:568,19,0	0/0:26,0:26:50.52:0,51,1094	0/0:36,0:36:99:0,99,1981	0/0:13,0:13:24.07:0,24,520	1/1:7,22:31:39.05:1312,39,0	1/1:7,24:32:38.99:1292,39,0	1/1:9,7:17:12.17:531,12,0	0/0:25,0:25:54.18:0,54,1232	0/0:30,0:30:66.23:0,66,1501	0/0:33,0:33:78.23:0,78,1675	0/0:10,0:10:25.87:0,26,497
chr10	51263623	.	GCT	G	126.66	PASS	AB=0.944;AC=7;AF=0.130;AN=54;BaseQRankSum=5.150;DP=521;FS=1.710;HRun=0;HaplotypeScore=98.9179;InbreedingCoeff=0.4391;MQ=74.07;MQ0=8;MQRankSum=-2.273;QD=1.38;ReadPosRankSum=-0.762;VQSLOD=1.9622;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:22,1:21:1.61:2,0,418	./.	0/0:44,0:24:40.23:0,40,467	0/0:49,1:31:3.71:0,4,342	0/0:20,0:20:33.10:0,33,506	1/1:8,0:8:14.68:92,15,0	1/1:16,0:15:18.43:142,18,0	0/1:26,2:27:9.98:10,0,793	0/0:13,0:13:26.50:0,27,484	0/0:19,0:18:10.88:0,11,415	0/1:15,1:15:4.38:4,0,421	0/0:14,0:12:22.80:0,23,193	0/0:14,0:12:17.43:0,17,228	0/0:12,0:12:27.09:0,27,438	0/0:14,0:11:26.66:0,27,350	0/0:18,0:14:16.65:0,17,149	0/0:21,0:21:57.18:0,57,900	0/0:1,0:1:2.74:0,3,12	0/0:21,1:22:6.65:0,7,545	0/0:15,1:15:1.56:0,2,483	0/0:36,1:36:51.94:0,52,1317	0/0:8,0:8:12.04:0,12,181	0/0:13,0:12:25.62:0,26,343	0/0:13,0:12:27.01:0,27,349	0/0:20,0:20:54.15:0,54,789	0/0:18,0:18:42.14:0,42,661	0/0:19,0:19:51.16:0,51,807	0/0:23,0:23:54.13:0,54,778
chr10	51263640	.	CTCCCTCCT	C	2041.86	PASS	AB=0.661;AC=19;AF=0.352;AN=54;BaseQRankSum=6.302;DP=502;FS=2.544;HRun=0;HaplotypeScore=123.4799;InbreedingCoeff=0.7004;MQ=58.50;MQ0=20;MQRankSum=-4.476;QD=17.16;ReadPosRankSum=-0.102;VQSLOD=2.7920;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,1:12:20.73:194,21,0	./.	0/0:59,0:18:23.71:0,24,295	0/0:72,0:22:28.48:0,28,371	0/0:12,0:12:23.69:0,24,617	1/1:10,0:10:14.89:144,15,0	1/1:14,0:13:6.33:123,6,0	0/0:32,0:30:57.49:0,57,970	0/0:12,0:12:17.18:0,17,723	0/0:18,0:17:39.09:0,39,1056	0/0:12,0:10:30.05:0,30,809	1/1:4,5:7:14.98:293,15,0	1/1:7,5:9:23.76:350,24,0	0/0:11,0:11:18.05:0,18,565	0/1:11,4:12:32.80:226,0,33	0/1:3,12:11:11.08:276,0,11	0/0:18,0:18:33.13:0,33,1501	0/1:1,1:2:58.89:76,0,59	0/0:15,0:14:30.06:0,30,625	0/0:15,0:14:36.07:0,36,969	0/0:35,0:34:80.78:0,81,2338	1/1:2,2:4:8.95:82,9,0	1/1:8,4:11:21.04:329,21,0	1/1:9,1:9:4.10:144,4,0	0/0:17,0:17:42.10:0,42,1221	0/0:18,0:18:48.14:0,48,1519	0/0:19,0:19:48.04:0,48,1191	0/0:17,0:17:30.06:0,30,839
chr10	51263644	.	CTCCT	C	1339.92	PASS	AB=0.963;AC=20;AF=0.370;AN=54;BaseQRankSum=7.584;DP=486;FS=0.000;HRun=0;HaplotypeScore=90.8372;InbreedingCoeff=0.6565;MQ=55.79;MQ0=19;MQRankSum=-6.567;QD=7.02;ReadPosRankSum=-1.095;VQSLOD=2.0883;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:12,0:11:20.84:156,21,0	./.	0/0:61,0:15:23.76:0,24,231	0/1:73,0:21:73.56:74,0,233	0/0:13,0:13:29.96:0,30,469	1/1:7,3:10:14.89:151,15,0	1/1:10,4:13:9.32:155,9,0	0/0:30,0:29:64.74:0,65,701	0/0:11,0:11:21.57:0,22,484	0/0:15,0:14:39.06:0,39,698	0/0:12,0:10:30.05:0,30,563	1/1:7,0:5:14.46:124,14,0	1/1:11,0:8:22.68:181,23,0	0/0:10,0:10:18.03:0,18,316	0/1:15,0:12:13.93:157,0,14	0/1:14,0:11:11.08:112,0,11	0/0:17,0:17:32.93:0,33,942	0/1:2,0:2:26.71:27,0,59	0/0:12,0:11:31.55:0,32,395	0/0:13,0:12:36.06:0,36,628	0/0:34,0:33:84.08:0,84,1524	1/1:6,0:6:14.85:109,15,0	1/1:11,0:10:20.86:173,21,0	1/1:10,1:10:7.13:121,7,0	0/0:17,0:17:45.10:0,45,835	0/0:16,0:16:47.93:0,48,972	0/0:18,0:18:47.23:0,47,782	0/0:14,0:14:35.89:0,36,592
chr10	51263728	.	TTC	T	1246.63	PASS	AB=0.905;AC=22;AF=0.423;AN=52;BaseQRankSum=2.698;DP=448;FS=12.133;HRun=0;HaplotypeScore=84.9927;InbreedingCoeff=0.2265;MQ=60.54;MQ0=15;MQRankSum=2.057;QD=6.23;ReadPosRankSum=2.707;VQSLOD=1.9085;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:17:13.52:0,14,99	1/1:3,3:6:9.02:99,9,0	0/0:50,0:14:0.94:0,1,2	0/0:74,0:28:0:0,0,0	0/0:17,0:17:7.21:0,7,421	./.	0/1:18,0:18:0.23:0,0,0	0/0:21,0:21:5.16:0,5,25	0/1:12,0:12:34.72:35,0,57	0/1:13,1:13:15.13:15,0,156	0/1:8,2:10:18.11:18,0,164	1/1:6,6:14:28.86:282,29,0	1/1:5,8:13:26.09:295,26,0	0/0:8,0:8:15.05:0,15,218	1/1:8,5:15:22.94:201,23,0	./.	0/1:14,2:16:39.25:39,0,265	0/1:2,2:3:5.25:57,0,5	0/0:12,0:14:18.02:0,18,194	0/0:13,0:12:9.02:0,9,116	0/1:21,1:22:11.88:12,0,203	1/1:5,1:6:6.01:66,6,0	1/1:7,4:11:17.88:197,18,0	0/1:9,0:9:0.14:0,0,0	0/1:13,1:13:15.12:15,0,185	0/0:10,0:9:13.59:0,14,166	0/1:12,2:14:77.50:78,0,282	0/0:5,0:5:15.02:0,15,183
chr10	51264085	.	AG	A	11354.03	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=13.552;DP=647;FS=8.487;HRun=1;HaplotypeScore=70.2978;InbreedingCoeff=0.9987;MQ=89.91;MQ0=0;MQRankSum=-1.782;QD=39.02;ReadPosRankSum=5.667;VQSLOD=4.9806;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,38:38:99:1468,105,0	1/1:0,11:11:33.11:461,33,0	0/0:24,0:24:72.24:0,72,1108	0/0:26,0:26:49.05:0,49,952	0/0:20,0:20:51.16:0,51,790	1/1:0,34:34:99:1384,99,0	1/1:0,28:28:75.25:1049,75,0	0/0:30,0:30:90.31:0,90,1439	0/0:25,0:25:75.26:0,75,1197	0/0:14,0:14:39.13:0,39,624	0/0:15,0:15:39.12:0,39,600	1/1:0,14:14:42.14:587,42,0	1/1:0,20:20:57.19:797,57,0	0/0:16,0:16:48.16:0,48,765	1/1:0,26:26:75.25:1049,75,0	1/1:1,24:25:17.83:833,18,0	0/0:22,0:22:66.23:0,66,1053	1/1:0,24:24:72.24:1007,72,0	0/0:28,0:28:78.24:0,78,1201	0/0:14,0:14:39.08:0,39,550	0/0:37,0:37:99:0,105,1629	1/1:0,22:22:57.19:797,57,0	1/1:0,18:18:48.16:663,48,0	1/1:0,31:31:90.30:1259,90,0	0/0:15,0:15:42.12:0,42,619	0/0:22,0:22:60.20:0,60,938	0/0:28,0:28:84.29:0,84,1340	0/0:20,0:20:60.20:0,60,954
chr10	51266362	.	TGA	T	1032.17	PASS	AB=0.942;AC=22;AF=0.393;AN=56;BaseQRankSum=9.821;DP=1016;FS=0.820;HRun=0;HaplotypeScore=298.6229;InbreedingCoeff=0.5829;MQ=48.71;MQ0=19;MQRankSum=-8.154;QD=2.19;ReadPosRankSum=-2.540;VQSLOD=1.6233;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:28:14.75:125,15,0	1/1:16,0:14:5.82:39,6,0	0/0:48,0:15:3.43:0,3,238	0/1:52,0:17:23.30:23,0,57	0/0:31,0:30:74.26:0,74,1064	0/1:24,4:27:10.16:53,0,10	1/1:30,3:33:18.24:133,18,0	0/0:41,0:39:99:0,104,1022	0/0:40,0:40:40.89:0,41,1177	0/0:44,0:43:45.63:0,46,1442	0/0:22,0:22:60.03:0,60,820	1/1:68,0:66:12.83:110,13,0	1/1:41,0:40:8.82:283,9,0	0/0:35,0:35:61.16:0,61,1131	1/1:46,2:46:1.48:23,1,0	0/1:49,2:51:39.66:86,0,40	0/0:29,0:29:67.69:0,68,995	1/1:17,0:17:4.40:165,4,0	0/0:25,0:24:56.79:0,57,806	0/0:31,0:31:39.08:0,39,938	0/0:74,0:73:99:0,178,2396	0/1:34,2:35:9.54:10,0,26	1/1:24,0:24:16.59:123,17,0	1/1:26,2:28:5.30:52,5,0	0/0:29,1:30:38.10:0,38,1174	0/0:44,0:44:99:0,102,1649	0/0:35,0:35:88.28:0,88,1316	0/0:14,0:15:39.84:0,40,522
chr10	51266364	.	AGT	A	619.37	PASS	AB=0.846;AC=14;AF=0.250;AN=56;BaseQRankSum=9.065;DP=1021;FS=2.932;HRun=0;HaplotypeScore=302.6959;InbreedingCoeff=0.2070;MQ=48.74;MQ0=18;MQRankSum=-7.047;QD=1.59;ReadPosRankSum=-3.429;VQSLOD=1.5896;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:24,3:26:5.39:31,5,0	1/1:15,1:14:0.80:16,1,0	0/0:49,0:16:42.03:0,42,531	0/0:51,0:16:32.66:0,33,330	0/0:32,0:31:77.88:0,78,1165	0/1:24,4:27:17.51:20,0,18	1/1:31,2:33:16.78:157,17,0	0/0:41,0:39:81.26:0,81,1305	0/0:39,0:39:66.47:0,66,1357	0/0:42,0:41:86.51:0,87,1454	0/0:21,0:21:51.14:0,51,811	0/1:51,17:66:43.97:79,0,44	0/1:35,5:39:99:219,0,106	0/0:35,0:35:75.25:0,75,1217	0/1:38,10:46:0.41:0,0,1	0/1:47,4:51:99:116,0,164	0/0:29,0:29:69.06:0,69,1066	0/1:13,4:17:45.50:100,0,45	0/0:25,0:25:57.19:0,57,909	0/0:31,0:31:72.14:0,72,1150	0/0:78,0:77:99:0,176,2745	0/1:29,7:35:6.11:6,0,91	0/1:19,6:25:29.39:29,0,31	0/0:25,2:27:4.76:0,5,14	0/0:30,0:30:52.78:0,53,1214	0/0:45,0:45:99:0,119,1887	0/0:36,0:36:93.14:0,93,1447	0/0:18,0:18:53.34:0,53,729
chr10	51266419	.	G	GTGTGTA	9019.01	PASS	AB=0.655;AC=22;AF=0.393;AN=56;BaseQRankSum=8.079;DP=1094;FS=4.825;HRun=0;HaplotypeScore=318.4842;InbreedingCoeff=0.7799;MQ=47.18;MQ0=18;MQRankSum=-12.444;QD=20.93;ReadPosRankSum=0.234;VQSLOD=3.4770;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:25,2:25:6.34:154,6,0	1/1:4,4:9:5.92:209,6,0	0/0:54,0:16:38.43:0,38,647	0/0:46,0:9:23.77:0,24,397	0/0:27,0:27:75.23:0,75,1585	1/1:16,12:28:26.75:753,27,0	1/1:5,26:32:17.94:623,18,0	0/0:55,0:48:99:0,126,2419	0/0:42,0:42:99:0,120,2573	0/0:51,0:50:99:0,144,3103	0/0:23,0:23:69.24:0,69,1523	1/1:19,45:68:32.54:1464,33,0	1/1:8,32:40:1.22:921,1,0	0/0:45,0:45:99:0,124,2352	1/1:16,47:68:33.32:1549,33,0	0/1:16,34:55:99:1392,0,178	0/0:33,0:33:90.15:0,90,1777	1/1:6,3:9:20.83:384,21,0	0/0:30,0:26:57.03:0,57,1082	0/0:30,0:30:84.23:0,84,1733	0/0:97,0:97:99:0,197,4420	1/1:14,11:26:23.30:751,23,0	1/1:25,9:33:12.64:680,13,0	0/1:20,12:32:18.14:140,0,18	0/0:22,0:22:57.12:0,57,1050	0/0:53,0:52:99:0,153,2988	0/0:30,0:30:84.24:0,84,1752	0/0:25,0:25:53.02:0,53,1543
chr10	51266524	.	CTGTGTGTG	C	479.38	PASS	AB=1.000;AC=4;AF=0.071;AN=56;BaseQRankSum=3.463;DP=1357;FS=4.178;HRun=0;HaplotypeScore=430.4374;InbreedingCoeff=0.4557;MQ=50.50;MQ0=24;MQRankSum=1.042;QD=3.75;ReadPosRankSum=-4.743;VQSLOD=0.0415;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:27,4:33:24.36:536,24,0	0/0:11,0:11:18.06:0,18,605	0/0:42,0:9:26.05:0,26,335	0/0:59,0:10:23.51:0,24,319	0/0:36,0:36:99:0,108,3912	0/0:30,0:29:19.48:0,19,713	0/0:64,0:61:98.08:0,98,3221	0/0:75,0:65:99:0,179,5083	0/0:53,0:53:99:0,151,5888	0/0:72,0:72:99:0,211,7677	0/0:22,0:22:66.16:0,66,2391	0/0:62,0:59:60.13:0,60,1588	0/1:50,0:49:25.87:26,0,1779	0/0:58,0:58:99:0,162,6177	0/0:61,0:59:36.10:0,36,1318	0/0:56,0:55:60.91:0,61,1685	0/0:43,0:43:99:0,126,4530	0/0:45,0:44:72.58:0,73,1667	0/0:22,0:13:39.11:0,39,1257	0/0:46,0:46:99:0,135,5150	0/0:130,0:124:99:0,308,11046	0/1:43,0:42:32.38:32,0,1311	0/0:31,0:31:36.03:0,36,1493	0/0:75,0:74:66.04:0,66,2978	0/0:38,0:38:90.80:0,91,3748	0/0:51,0:51:99:0,150,5262	0/0:31,0:31:90.08:0,90,2997	0/0:15,0:15:45.15:0,45,1858
chr10	51266532	.	G	GTC	7603.36	PASS	AB=1.000;AC=20;AF=0.357;AN=56;BaseQRankSum=-5.317;DP=1364;FS=48.235;HRun=0;HaplotypeScore=301.0923;InbreedingCoeff=0.8262;MQ=50.26;MQ0=21;MQRankSum=-0.072;QD=14.35;ReadPosRankSum=2.213;VQSLOD=2.9407;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:33:23.15:0,23,134	1/1:0,12:12:18.06:319,18,0	0/0:38,0:6:13.62:0,14,122	0/0:57,0:10:7.05:0,7,122	0/0:35,0:35:99:0,99,1286	0/1:31,0:30:13.74:46,0,14	0/1:64,0:62:61.64:62,0,224	0/0:68,0:59:94.32:0,94,1383	0/0:56,0:56:99:0,150,1893	0/0:76,0:76:99:0,213,2489	0/0:23,0:23:62.92:0,63,755	1/1:39,26:62:45.93:659,46,0	1/1:29,21:49:69.99:950,70,0	0/0:62,0:62:99:0,157,1922	1/1:36,26:59:38.42:502,38,0	1/1:38,18:55:49.86:641,50,0	0/0:42,0:43:99:0,120,1407	1/1:6,42:47:12.16:1000,12,0	0/0:17,0:12:36.05:0,36,415	0/0:51,0:51:99:0,138,1578	0/0:131,0:126:99:0,288,3444	1/1:23,17:39:57.14:884,57,0	1/1:17,13:30:60.07:974,60,0	1/1:40,31:70:91.98:1567,92,0	0/0:41,0:41:99:0,103,1151	0/0:50,0:50:99:0,135,1631	0/0:29,0:29:78.02:0,78,876	0/0:15,0:15:42.14:0,42,573
chr10	51266616	.	ATG	A	8473.86	PASS	AB=0.652;AC=23;AF=0.411;AN=56;BaseQRankSum=18.592;DP=1277;FS=1.592;HRun=0;HaplotypeScore=300.6965;InbreedingCoeff=0.9219;MQ=50.60;MQ0=17;MQRankSum=2.497;QD=14.97;ReadPosRankSum=2.414;VQSLOD=4.0894;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:27,44:65:55.16:730,55,0	1/1:4,10:14:21.06:272,21,0	0/0:26,0:5:3.01:0,3,50	0/0:37,0:14:21:0,21,260	0/0:33,0:32:81.26:0,81,1327	1/1:11,14:25:22.84:279,23,0	1/1:21,24:45:56.57:723,57,0	0/0:55,0:54:99:0,132,2059	0/0:54,0:54:99:0,147,2390	0/0:61,0:60:99:0,159,2571	0/0:21,0:21:56.67:0,57,894	1/1:28,28:53:60.03:738,60,0	1/1:4,45:49:48.13:624,48,0	0/0:57,0:56:99:0,144,2291	1/1:34,42:75:91.61:1148,92,0	1/1:20,43:63:96.72:1220,97,0	0/0:39,0:39:96.61:0,97,1594	0/1:14,16:30:3.78:706,0,4	0/0:30,0:28:57.19:0,57,937	0/0:43,0:42:99:0,117,1854	0/0:133,0:127:99:0,324,5250	1/1:20,18:37:45.12:554,45,0	1/1:9,18:25:48.16:623,48,0	1/1:11,60:71:66.17:858,66,0	0/0:29,0:29:77.48:0,77,1256	0/0:55,0:54:99:0,128,2178	0/0:26,0:26:69.19:0,69,1131	0/0:11,0:11:21.05:0,21,324
chr10	51266716	.	G	GTA	607.35	PASS	AB=0.994;AC=16;AF=0.286;AN=56;BaseQRankSum=12.473;DP=1312;FS=53.562;HRun=0;HaplotypeScore=344.2460;InbreedingCoeff=0.3413;MQ=43.82;MQ0=43;MQRankSum=-3.040;QD=1.09;ReadPosRankSum=0.900;VQSLOD=0.5770;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:55,2:54:1.06:16,1,0	0/0:7,0:7:5.77:0,6,17	0/0:57,0:10:27.07:0,27,368	0/0:61,0:19:54.13:0,54,747	0/0:32,0:31:84.24:0,84,1216	0/1:39,0:38:37.04:37,0,54	0/1:50,0:49:18.53:19,0,49	0/0:68,0:56:99:0,147,1909	0/0:50,0:50:99:0,130,1788	0/0:60,0:55:99:0,159,2269	0/0:21,0:20:60.16:0,60,850	0/1:72,0:72:67.07:67,0,93	0/1:68,0:65:91.35:189,0,91	0/0:61,0:59:99:0,165,2471	1/1:65,0:64:11.67:51,12,0	0/1:61,0:59:31.85:126,0,32	0/0:46,0:46:99:0,126,1693	0/1:28,1:29:92.96:161,0,93	0/0:24,0:14:33.06:0,33,470	0/0:29,0:28:77.44:0,77,1110	0/0:109,0:105:99:0,253,3521	1/1:40,0:39:9.51:50,10,0	1/1:31,0:29:10.91:53,11,0	1/1:40,2:41:1.97:8,2,0	0/0:35,0:35:86.86:0,87,1263	0/0:54,0:52:99:0,153,2106	0/0:30,0:27:81.13:0,81,1121	0/0:11,0:11:18.06:0,18,272
chr10	51266720	.	GTC	G	948.30	PASS	AB=0.995;AC=19;AF=0.339;AN=56;BaseQRankSum=14.790;DP=1275;FS=12.532;HRun=0;HaplotypeScore=334.2001;InbreedingCoeff=0.6156;MQ=44.08;MQ0=38;MQRankSum=-4.828;QD=1.79;ReadPosRankSum=-3.665;VQSLOD=0.4860;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:56,0:52:1.40:16,1,0	0/0:7,0:7:3.79:0,4,10	0/0:57,0:10:27.20:0,27,339	0/0:63,0:18:38.44:0,38,664	0/0:31,0:30:84.18:0,84,1382	1/1:35,1:35:20.16:102,20,0	0/1:44,0:43:16.94:17,0,41	0/0:67,0:55:99:0,121,2059	0/0:46,0:46:99:0,123,2111	0/0:59,0:55:99:0,134,2590	0/0:19,0:18:54.17:0,54,977	0/1:70,1:71:37.29:94,0,37	1/1:64,1:62:16.54:316,17,0	0/0:58,0:57:99:0,154,2944	1/1:62,1:63:15.77:69,16,0	1/1:60,0:58:1.83:213,2,0	0/0:49,0:49:84.77:0,85,1892	0/1:28,0:28:35.14:128,0,35	0/0:25,0:15:28.16:0,28,565	0/0:30,0:29:62.58:0,63,1236	0/0:106,0:104:99:0,258,4044	1/1:39,1:40:8.90:109,9,0	1/1:29,0:28:12.11:61,12,0	1/1:38,1:38:1.89:8,2,0	0/0:35,0:35:96.19:0,96,1509	0/0:55,0:53:99:0,134,2503	0/0:28,0:28:65.81:0,66,1254	0/0:8,0:8:20.86:0,21,290
chr10	51266721	.	T	TGC	3506.04	PASS	AB=0.779;AC=14;AF=0.250;AN=56;BaseQRankSum=11.652;DP=1258;FS=51.701;HRun=0;HaplotypeScore=323.3560;InbreedingCoeff=0.1890;MQ=44.25;MQ0=36;MQRankSum=-1.426;QD=6.87;ReadPosRankSum=-3.433;VQSLOD=1.5340;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:38,16:51:5.52:123,6,0	0/0:5,2:7:5.50:0,6,20	0/0:59,0:11:27.07:0,27,365	0/0:63,0:18:51.05:0,51,680	0/0:32,0:31:84.25:0,84,1285	1/1:28,7:34:9.99:331,10,0	0/1:27,13:39:50.13:204,0,50	0/0:65,0:53:99:0,144,1999	0/0:47,0:47:99:0,124,1852	0/0:59,0:55:99:0,165,2458	0/0:19,0:18:54.17:0,54,850	0/1:50,20:70:90.90:377,0,91	0/1:39,21:57:99:680,0,115	0/0:58,0:57:99:0,169,2659	0/1:42,17:59:17.17:284,0,17	0/1:43,16:57:52.38:482,0,52	0/0:48,0:48:99:0,136,1880	0/1:17,9:27:96.19:562,0,96	0/0:26,0:16:39.06:0,39,532	0/0:30,0:29:80.71:0,81,1194	0/0:105,0:104:99:0,259,3708	0/1:31,9:40:23.60:228,0,24	0/1:24,5:28:1.80:227,0,2	1/1:27,10:37:2.35:8,2,0	0/0:36,0:36:96.22:0,96,1416	0/0:54,0:53:99:0,156,2276	0/0:28,0:28:80.55:0,81,1171	0/0:9,0:9:21.05:0,21,311
chr10	51266731	.	TGA	T	1682.79	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=16.055;DP=1252;FS=17.642;HRun=0;HaplotypeScore=330.0581;InbreedingCoeff=0.7879;MQ=44.76;MQ0=32;MQRankSum=-6.494;QD=3.27;ReadPosRankSum=-5.356;VQSLOD=0.7143;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:47,3:47:7.47:83,7,0	1/1:10,0:10:2.06:17,2,0	0/0:75,0:18:30.39:0,30,506	0/0:71,0:23:33.90:0,34,610	0/0:28,0:27:78.20:0,78,1346	1/1:33,0:32:18.44:120,18,0	0/1:44,0:43:3.40:103,0,3	0/0:62,0:55:99:0,114,2000	0/0:45,0:45:99:0,123,2123	0/0:55,0:52:99:0,147,2550	0/0:21,0:21:63.14:0,63,1044	0/1:67,0:67:19.30:121,0,19	1/1:54,0:52:59.23:433,59,0	0/0:57,0:56:99:0,162,2640	1/1:65,0:65:30.53:228,31,0	1/1:58,0:56:36.09:340,36,0	0/0:46,0:46:90.17:0,90,1854	1/1:24,0:24:27.60:233,28,0	0/0:29,0:19:37.52:0,38,701	0/0:28,0:28:78.20:0,78,1303	0/0:96,1:96:99:0,229,3805	1/1:41,0:41:7.60:106,8,0	1/1:32,0:32:14.36:100,14,0	0/1:37,0:37:0.20:0,0,0	0/0:30,0:30:84.65:0,85,1439	0/0:57,0:56:99:0,120,2643	0/0:28,0:28:81.21:0,81,1359	0/0:8,0:8:21.02:0,21,319
chr10	51266733	.	AGTGTGTGT	A	4102.29	PASS	AB=0.717;AC=16;AF=0.286;AN=56;BaseQRankSum=12.357;DP=1245;FS=8.671;HRun=0;HaplotypeScore=403.5891;InbreedingCoeff=0.1925;MQ=44.98;MQ0=32;MQRankSum=-6.400;QD=8.06;ReadPosRankSum=-4.729;VQSLOD=0.3432;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:40,10:48:12.75:33,0,13	1/1:7,3:10:3.24:75,3,0	0/0:74,0:17:35.62:0,36,1013	0/0:72,0:24:62.41:0,62,1404	0/0:30,0:29:81.20:0,81,2755	0/1:12,19:30:62.78:152,0,63	1/1:26,16:41:13.58:245,14,0	0/0:60,0:55:99:0,123,3443	0/0:46,0:46:99:0,116,4325	0/0:54,0:51:99:0,140,5035	0/0:21,0:21:63.22:0,63,2321	0/1:36,29:65:35.91:334,0,36	0/1:32,20:50:99:1060,0,147	0/0:57,0:56:99:0,159,5518	1/1:38,29:67:3.62:572,4,0	0/1:31,25:54:72.55:851,0,73	0/0:45,0:44:85.79:0,86,3696	0/1:20,5:25:81.04:341,0,81	0/0:28,0:19:50.65:0,51,1491	0/0:29,0:29:75.24:0,75,2757	0/0:94,0:94:99:0,217,7308	0/1:21,19:40:26.19:290,0,26	0/1:15,16:31:33.21:123,0,33	1/1:31,8:39:4.04:27,4,0	0/0:31,0:31:72.23:0,72,2779	0/0:57,0:56:99:0,150,5688	0/0:28,0:28:81.26:0,81,2980	0/0:8,0:8:18.06:0,18,515
chr10	51266741	.	T	TGTGA	2322.59	PASS	AB=0.960;AC=23;AF=0.411;AN=56;BaseQRankSum=13.808;DP=1226;FS=16.020;HRun=0;HaplotypeScore=356.6979;InbreedingCoeff=0.8238;MQ=46.04;MQ0=26;MQRankSum=-3.927;QD=4.65;ReadPosRankSum=-3.036;VQSLOD=0.5131;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:49,1:47:1.67:16,2,0	1/1:12,0:12:7.09:66,7,0	0/0:68,0:17:42.51:0,43,656	0/0:66,0:27:71.35:0,71,964	0/0:30,0:30:81.19:0,81,1353	1/1:32,0:31:9.06:129,9,0	1/1:37,1:37:12.85:178,13,0	0/0:72,0:66:99:0,159,2306	0/0:42,0:42:99:0,114,2022	0/0:56,0:53:99:0,150,2540	0/0:22,0:22:63.22:0,63,1170	1/1:59,1:60:10.64:214,11,0	1/1:50,0:49:33.11:454,33,0	0/0:59,0:58:99:0,156,2660	1/1:68,0:68:36.56:414,37,0	1/1:56,1:55:6.50:438,6,0	0/0:45,0:44:99:0,106,1867	0/1:23,1:24:52.72:214,0,53	0/0:29,0:22:57.61:0,58,873	0/0:27,0:27:75.24:0,75,1373	0/0:90,0:89:99:0,225,3665	1/1:40,0:40:28.63:255,29,0	1/1:29,0:29:10.53:106,11,0	1/1:36,3:39:4.46:45,4,0	0/0:29,0:29:74.82:0,75,1343	0/0:54,0:53:99:0,147,2676	0/0:29,0:29:87.25:0,87,1535	0/0:8,0:8:21.05:0,21,336
chr10	51267616	.	CGCGTGTGTGTGTGAGTGTGTGTGTGT	C	5153.53	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=3.135;DP=684;FS=3.435;HRun=0;HaplotypeScore=340.1358;InbreedingCoeff=0.7991;MQ=63.09;MQ0=8;MQRankSum=-1.575;QD=18.95;ReadPosRankSum=3.917;VQSLOD=2.8885;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:44,0:44:99:193,0,186	1/1:0,15:15:5.93:231,6,0	0/0:32,0:23:47.83:0,48,504	0/0:34,0:23:38.11:0,38,475	0/0:23,0:23:69.02:0,69,4210	1/1:21,0:21:20.67:412,21,0	1/1:20,0:20:5.49:244,5,0	0/0:20,0:19:56.63:0,57,888	0/0:23,0:23:63.06:0,63,4589	0/0:29,0:29:80.93:0,81,5245	0/0:7,0:7:17.98:0,18,867	1/1:1,16:17:3.48:213,3,0	1/1:0,29:29:0.75:208,1,0	0/0:32,0:32:87.08:0,87,5166	1/1:1,16:16:9.03:636,9,0	1/1:1,30:31:18.06:1272,18,0	0/0:36,0:36:96.92:0,97,5222	1/1:10,0:10:26.85:266,27,0	0/0:16,0:15:44.79:0,45,1162	0/0:14,0:14:41.94:0,42,1867	0/0:71,0:69:99:0,187,12335	1/1:0,21:21:6.02:422,6,0	1/1:0,22:22:9.03:588,9,0	1/1:25,0:25:41.96:469,42,0	0/0:15,0:15:36.04:0,36,2653	0/0:20,0:20:59.30:0,59,2583	0/0:21,0:21:59.89:0,60,4083	0/0:18,0:18:50.69:0,51,2607
chr10	51267630	.	AGT	A	145	PASS	AB=0.974;AC=19;AF=0.339;AN=56;BaseQRankSum=6.591;DP=679;FS=4.519;HRun=0;HaplotypeScore=108.8428;InbreedingCoeff=0.3314;MQ=56.05;MQ0=13;MQRankSum=-2.913;QD=0.50;ReadPosRankSum=2.578;VQSLOD=1.7638;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:48,0:48:7.43:7,0,16	1/1:15,0:15:2.72:14,3,0	0/0:18,0:9:3:0,3,25	0/0:26,0:14:3.01:0,3,39	0/0:23,0:23:12.99:0,13,598	1/1:20,0:20:2.84:14,3,0	0/0:17,0:17:3.01:0,3,33	0/0:22,0:19:33.03:0,33,413	0/0:25,0:25:58.56:0,59,810	0/0:27,0:27:62.42:0,62,784	0/1:7,0:7:20.11:20,0,149	1/1:17,0:17:2.84:14,3,0	0/1:30,0:30:8.19:8,0,9	0/0:34,0:34:48.30:0,48,672	1/1:17,0:16:8.52:41,9,0	1/1:30,0:30:17.04:83,17,0	0/1:37,0:37:35.78:36,0,719	0/0:9,0:9:1.55:0,2,4	0/0:16,0:14:5.25:0,5,93	0/0:12,0:12:20.95:0,21,275	0/0:74,0:71:25.50:0,26,1672	1/1:21,0:21:5.54:25,6,0	1/1:23,0:22:4.42:25,4,0	0/0:23,0:23:5.49:0,5,30	0/0:15,4:19:0.06:0,0,385	0/0:22,0:22:33.65:0,34,483	0/1:23,4:27:19.16:19,0,587	0/0:18,0:18:30.10:0,30,454
chr10	51267632	.	TGTGTGTGTGTGTGTGTGTGTGTGA	T	2874.94	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=7.907;DP=687;FS=1.705;HRun=0;HaplotypeScore=307.8898;InbreedingCoeff=0.7026;MQ=54.44;MQ0=15;MQRankSum=-3.658;QD=12.61;ReadPosRankSum=1.389;VQSLOD=1.4895;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:12.49:0,12,163	1/1:15,0:15:2.64:158,3,0	0/0:18,0:8:3.01:0,3,100	0/0:27,0:12:3.01:0,3,44	0/0:23,0:23:51.18:0,51,4096	1/1:10,10:20:3.01:189,3,0	1/1:19,0:19:5.59:111,6,0	0/0:21,0:18:48.15:0,48,1676	0/0:26,0:26:60.21:0,60,4871	0/0:28,0:28:69.20:0,69,5132	0/0:7,0:7:15.05:0,15,1255	1/1:17,0:17:3.48:159,3,0	1/1:30,0:30:4.12:173,4,0	0/0:34,0:34:72.21:0,72,4998	1/1:17,0:16:9.03:475,9,0	1/1:30,0:30:18.06:948,18,0	0/0:37,0:36:66.68:0,67,5256	0/1:10,0:10:19.62:20,0,34	0/0:17,0:15:19.26:0,19,881	0/0:12,0:12:21.07:0,21,1756	0/0:77,0:73:99:0,162,12258	1/1:22,0:22:6.02:315,6,0	1/1:23,0:22:9.03:428,9,0	1/1:25,0:25:9.01:86,9,0	0/0:19,0:19:36.12:0,36,2912	0/0:22,0:22:40.38:0,40,2431	0/0:27,0:27:51.18:0,51,4159	0/0:15,0:15:33.11:0,33,2286
chr10	51269709	.	T	TGGAGCCA	8392.66	PASS	AB=0.731;AC=19;AF=0.339;AN=56;BaseQRankSum=-3.538;DP=521;FS=5.028;HRun=0;HaplotypeScore=115.7470;InbreedingCoeff=0.8748;MQ=88.08;MQ0=1;MQRankSum=-12.874;QD=46.11;ReadPosRankSum=0.779;VQSLOD=4.6715;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:24,14:40:42.14:1460,42,0	1/1:1,5:7:9.03:340,9,0	0/0:18,0:18:36.11:0,36,740	0/0:24,0:24:54.13:0,54,1054	0/0:12,0:12:21.06:0,21,455	0/0:15,0:15:42.13:0,42,956	0/0:33,0:33:72.22:0,72,1603	0/0:25,0:25:33.11:0,33,763	0/0:20,0:20:45.12:0,45,969	0/0:17,0:17:48.15:0,48,1100	0/0:14,0:14:39.12:0,39,871	1/1:2,11:15:27.09:996,27,0	1/1:6,6:12:15.05:566,15,0	0/0:17,0:17:39.07:0,39,741	1/1:9,14:23:39.13:1472,39,0	1/1:9,9:20:30.10:1133,30,0	0/0:27,0:27:63.22:0,63,1502	0/1:12,6:19:56.57:439,0,57	0/0:16,0:16:33.11:0,33,787	0/0:13,0:13:33.11:0,33,788	0/0:34,0:34:84.24:0,84,1860	1/1:4,6:13:21.07:758,21,0	1/1:5,9:14:21.07:776,21,0	1/1:11,7:18:12.04:453,12,0	0/0:6,0:6:18.06:0,18,430	0/0:27,0:27:72.25:0,72,1715	0/0:20,0:20:39.13:0,39,888	0/0:1,0:1:3.01:0,3,72
chr10	51276796	.	T	TA	728.09	PASS	AB=0.857;AC=11;AF=0.196;AN=56;BaseQRankSum=2.125;DP=585;FS=1.248;HRun=14;HaplotypeScore=84.4642;InbreedingCoeff=-0.1187;MQ=72.80;MQ0=1;MQRankSum=-0.629;QD=3.17;ReadPosRankSum=-2.436;VQSLOD=0.0828;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:19,28:50:43.90:363,0,44	0/0:8,0:8:11.75:0,12,77	0/0:24,0:19:9.96:0,10,51	0/0:7,0:7:4.90:0,5,13	0/0:25,1:28:2.03:0,2,133	1/1:6,14:22:1.42:227,1,0	0/1:8,8:16:49.99:105,0,50	0/1:35,1:38:10.92:11,0,181	0/0:14,0:17:21.71:0,22,127	0/0:18,0:22:26.65:0,27,164	0/1:15,1:16:8.72:9,0,78	0/0:16,0:16:14.47:0,14,95	0/0:19,0:21:22.38:0,22,138	0/0:25,0:25:28.04:0,28,177	0/0:16,0:19:23.47:0,23,131	0/0:28,0:28:9.22:0,9,169	0/0:21,0:23:43.28:0,43,272	0/1:14,5:19:72.91:73,0,102	0/0:14,0:15:5.80:0,6,38	0/0:16,0:16:28.71:0,29,190	0/0:25,0:25:37.51:0,38,247	0/0:16,0:16:14.41:0,14,94	0/0:18,0:19:13.62:0,14,82	0/1:22,0:24:36.93:37,0,112	0/1:13,1:14:9.71:10,0,66	0/0:25,0:25:23.36:0,23,153	0/1:16,3:19:26.23:26,0,108	0/1:11,1:12:5.75:6,0,94
chr10	51277395	.	GGA	G	268.01	PASS	AB=0.983;AC=11;AF=0.239;AN=46;BaseQRankSum=2.984;DP=555;FS=0.000;HRun=0;HaplotypeScore=101.0868;InbreedingCoeff=-0.1560;MQ=66.30;MQ0=15;MQRankSum=1.523;QD=1.22;ReadPosRankSum=1.981;VQSLOD=1.5192;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	0/0:28,0:28:9.02:0,9,114	0/1:26,0:25:17.27:27,0,17	0/0:26,0:25:8.07:0,8,48	0/0:19,0:19:5.93:0,6,40	0/1:24,2:25:57.62:58,0,263	0/0:19,0:19:12:0,12,145	0/0:13,0:13:1.55:0,2,4	0/1:25,1:23:25.60:58,0,26	0/0:17,0:17:2.90:0,3,76	0/0:15,0:14:23.44:0,23,310	0/1:28,0:26:12.19:12,0,75	0/1:20,0:20:16.79:17,0,74	0/0:23,0:23:15.83:0,16,248	0/0:24,0:23:0.09:0,0,135	0/0:13,0:13:1.55:0,2,5	0/1:16,0:16:15.90:54,0,16	0/1:29,0:28:6.21:6,0,159	0/1:14,0:13:2.24:2,0,21	0/0:10,0:8:5.92:0,6,43	1/1:18,2:20:14.96:129,15,0	0/0:12,0:11:2.70:0,3,25	0/1:14,0:14:31.56:32,0,144	0/0:23,0:22:3.59:0,4,174	./.
chr10	51277442	.	CAG	C	34.54	PASS	AB=0.981;AC=6;AF=0.115;AN=52;BaseQRankSum=5.439;DP=649;FS=2.241;HRun=0;HaplotypeScore=141.4732;InbreedingCoeff=0.0935;MQ=43.60;MQ0=30;MQRankSum=0.129;QD=0.26;ReadPosRankSum=-0.208;VQSLOD=2.7744;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:14:0.82:7,1,0	0/0:8,0:8:1.55:0,2,4	./.	./.	0/0:26,0:24:44.94:0,45,707	0/0:30,0:30:3.58:0,4,26	0/0:28,0:27:6.81:0,7,56	0/0:27,0:25:72.07:0,72,781	0/0:25,0:25:58.93:0,59,788	0/0:27,0:26:66.19:0,66,1041	0/0:24,0:24:21.07:0,21,316	0/1:22,1:21:3.71:4,0,27	0/1:28,0:27:8.21:31,0,8	0/0:26,0:24:59.75:0,60,806	0/0:33,1:31:10.94:0,11,58	0/1:34,0:32:24.13:33,0,24	0/0:40,0:36:61.30:0,61,1103	0/0:32,1:30:7.07:0,7,208	0/0:25,0:20:55.25:0,55,665	0/0:22,0:20:26.79:0,27,368	0/0:28,0:22:24.05:0,24,372	0/0:19,1:18:8.51:0,9,50	0/0:21,0:19:3.97:0,4,20	0/1:27,1:23:32.70:64,0,33	0/0:20,0:16:27.99:0,28,402	0/0:21,0:20:47.65:0,48,672	0/0:27,0:24:60.04:0,60,831	0/0:3,0:1:3.01:0,3,36
chr10	51277448	.	CAG	C	956.70	PASS	AB=0.939;AC=17;AF=0.327;AN=52;BaseQRankSum=9.479;DP=645;FS=11.812;HRun=0;HaplotypeScore=134.8057;InbreedingCoeff=0.6312;MQ=44.87;MQ0=26;MQRankSum=-0.434;QD=3.92;ReadPosRankSum=1.431;VQSLOD=2.0454;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:16:6.02:66,6,0	1/1:8,0:8:3.01:30,3,0	./.	./.	0/0:25,0:24:44.94:0,45,755	0/0:33,0:33:1.56:0,2,4	0/0:29,0:28:0.07:0,0,45	0/0:26,0:23:51.11:0,51,778	0/0:26,0:26:55.98:0,56,861	0/0:29,0:28:69.15:0,69,1109	0/0:23,0:23:21.07:0,21,357	1/1:23,0:21:14.97:166,15,0	1/1:30,0:29:18.89:176,19,0	0/0:23,0:22:54.17:0,54,886	1/1:32,0:29:9.31:95,9,0	1/1:32,0:30:17.04:183,17,0	0/0:39,0:35:59.75:0,60,1063	0/1:32,1:30:6.11:253,0,6	0/0:25,0:20:47.75:0,48,666	0/0:23,0:21:30.09:0,30,480	0/0:29,0:23:36.07:0,36,537	0/1:16,1:15:1.98:55,0,2	1/1:19,0:17:6.38:65,6,0	0/1:25,3:23:30.33:42,0,30	0/0:18,0:15:26.21:0,26,413	0/0:20,0:19:44.63:0,45,704	0/0:29,0:27:68.88:0,69,1062	0/0:4,0:2:6:0,6,74
chr10	51277450	.	G	GAC	1901.98	PASS	AB=0.590;AC=16;AF=0.308;AN=52;BaseQRankSum=8.187;DP=649;FS=17.735;HRun=0;HaplotypeScore=133.3690;InbreedingCoeff=0.5065;MQ=45.32;MQ0=23;MQRankSum=-2.220;QD=7.61;ReadPosRankSum=3.036;VQSLOD=2.2447;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,17:16:5.94:108,6,0	1/1:1,7:9:3:27,3,0	./.	./.	0/0:25,0:24:48.15:0,48,712	0/0:15,17:34:17.79:0,18,121	0/1:10,21:32:46.01:46,0,69	0/0:24,0:21:62.13:0,62,800	0/0:25,0:25:62.51:0,63,851	0/0:29,0:28:75.10:0,75,1062	0/0:23,0:23:21.07:0,21,321	0/1:5,16:20:9.86:287,0,10	1/1:3,26:29:24.06:384,24,0	0/0:23,0:22:54.18:0,54,820	1/1:5,25:29:8.94:170,9,0	1/1:6,25:31:5.57:403,6,0	0/0:40,0:36:79.23:0,79,1107	0/1:15,20:32:76.71:430,0,77	0/0:23,0:19:56.12:0,56,714	0/0:23,0:21:33.08:0,33,461	0/0:30,0:24:36.09:0,36,505	0/1:4,13:15:35.77:101,0,36	1/1:1,18:18:5.86:114,6,0	0/0:16,13:24:8.13:0,8,71	0/0:19,0:16:25.80:0,26,371	0/0:19,0:18:51.62:0,52,717	0/0:29,0:27:74.95:0,75,1037	0/0:4,0:2:6:0,6,69
chr10	51282189	.	G	GC	6752.76	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-14.067;DP=551;FS=1.979;HRun=8;HaplotypeScore=59.9610;InbreedingCoeff=0.9779;MQ=83.63;MQ0=0;MQRankSum=-2.317;QD=26.90;ReadPosRankSum=1.952;VQSLOD=5.5988;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,41:47:99:1246,108,0	1/1:0,7:7:18.05:208,18,0	0/0:20,0:20:36.17:0,36,313	0/0:18,0:18:32.84:0,33,284	0/0:15,1:16:10.41:0,10,349	1/1:2,15:17:11.67:388,12,0	1/1:5,10:15:30.09:346,30,0	0/0:28,0:28:51:0,51,466	0/0:10,0:10:27.01:0,27,247	0/0:19,0:19:51.02:0,51,464	1/1:1,15:16:33.10:381,33,0	1/1:3,22:26:66.18:751,66,0	1/1:0,12:12:33.10:381,33,0	0/0:19,0:19:54.03:0,54,494	1/1:2,23:25:66.20:762,66,0	1/1:3,12:15:8.64:353,9,0	0/0:43,0:43:99:0,117,1064	1/1:1,21:22:63.19:727,63,0	0/0:11,0:11:27.01:0,27,247	0/0:12,0:12:33.01:0,33,301	0/0:27,0:29:73.10:0,73,643	1/1:3,12:16:35.94:414,36,0	1/1:3,11:14:30.09:346,30,0	1/1:6,13:19:39.12:450,39,0	0/0:25,0:25:63.03:0,63,576	0/0:22,0:22:54.01:0,54,491	0/0:21,0:21:63.03:0,63,577	0/0:7,0:7:18.01:0,18,165
chr10	51283637	.	G	GA	4381.59	PASS	AB=0.766;AC=24;AF=0.429;AN=56;BaseQRankSum=2.273;DP=606;FS=2.162;HRun=11;HaplotypeScore=72.0583;InbreedingCoeff=0.6838;MQ=59.96;MQ0=23;MQRankSum=-0.125;QD=16.47;ReadPosRankSum=1.963;VQSLOD=5.8715;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,23:37:70.96:717,71,0	1/1:3,11:14:30.06:303,30,0	0/0:22,0:7:7.62:0,8,49	0/0:22,0:7:14.67:0,15,101	0/0:27,0:28:28.53:0,29,393	1/1:4,5:10:14.86:136,15,0	1/1:5,14:21:32.90:317,33,0	0/0:35,0:34:68.93:0,69,513	0/0:14,1:14:2.44:0,2,199	0/0:26,0:25:59.73:0,60,462	0/0:19,1:22:9.44:0,9,236	1/1:6,22:29:4.31:435,4,0	1/1:7,10:16:27.05:274,27,0	0/1:10,1:11:3.54:4,0,159	1/1:4,13:17:32.25:360,32,0	1/1:6,15:21:45.08:452,45,0	0/0:17,0:17:50.76:0,51,387	0/1:6,13:19:24.88:273,0,25	0/1:13,1:14:0.56:1,0,177	0/0:30,0:32:71.19:0,71,540	0/0:15,0:15:37.90:0,38,285	1/1:4,17:23:47.88:460,48,0	0/1:6,11:17:13.97:254,0,14	1/1:0,15:15:39.08:396,39,0	0/0:30,0:30:74.66:0,75,578	0/0:20,1:21:22.36:0,22,345	0/0:31,0:31:37.49:0,37,460	0/0:16,1:19:6.47:0,6,213
chr10	51287183	.	TTGTGTG	T	84.26	PASS	AB=0.907;AC=7;AF=0.135;AN=52;BaseQRankSum=4.484;DP=614;FS=10.219;HRun=0;HaplotypeScore=134.8121;InbreedingCoeff=0.1324;MQ=67.84;MQ0=15;MQRankSum=-0.110;QD=0.87;ReadPosRankSum=0.211;VQSLOD=2.2515;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:2.04:0,2,80	1/1:9,0:9:1.35:3,1,0	./.	./.	0/0:21,0:21:18.04:0,18,481	0/1:23,0:24:29.78:30,0,62	0/0:21,0:19:5.96:0,6,66	0/0:20,0:18:4.51:0,5,22	0/0:16,0:15:12.01:0,12,146	0/0:32,0:31:12.03:0,12,279	0/0:18,0:18:9.49:0,9,201	0/0:30,0:30:36.07:0,36,759	0/0:20,0:20:21.29:0,21,277	0/0:19,0:19:9.03:0,9,244	1/1:26,1:27:4.11:62,4,0	0/1:19,1:21:27.83:59,0,28	0/0:31,0:31:14.92:0,15,181	0/0:18,0:17:14.83:0,15,175	0/0:12,0:12:5.95:0,6,110	0/0:14,0:13:3:0,3,25	0/0:40,0:38:32.39:0,32,466	0/0:22,0:22:6.47:0,6,71	0/0:12,0:12:5.18:0,5,88	0/0:26,0:26:16.10:0,16,406	0/0:15,0:15:6.02:0,6,162	0/0:21,0:20:11.72:0,12,77	0/1:13,2:15:40.66:41,0,257	0/0:23,0:20:10.23:0,10,138
chr10	51288150	.	TGCGCGC	T	1996.76	PASS	AB=0.928;AC=18;AF=0.333;AN=54;BaseQRankSum=1.198;DP=527;FS=3.654;HRun=0;HaplotypeScore=151.4111;InbreedingCoeff=0.0531;MQ=49.51;MQ0=4;MQRankSum=1.532;QD=7.89;ReadPosRankSum=-6.113;VQSLOD=0.2735;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:32,0:32:37.46:37,0,44	0/1:10,0:9:52.13:52,0,59	1/1:3,0:2:3.01:42,3,0	./.	0/0:17,0:17:33.58:0,34,980	0/1:16,0:15:88.64:89,0,131	1/1:22,0:20:6.40:72,6,0	0/0:24,0:24:45.62:0,46,1188	0/1:11,0:12:25.92:26,0,650	0/0:18,0:19:57.19:0,57,1578	0/0:13,0:13:29.82:0,30,876	0/1:24,3:28:82.55:478,0,83	0/1:17,1:18:99:284,0,174	0/0:22,0:22:48.16:0,48,1444	1/1:21,3:23:15.05:333,15,0	0/1:23,3:26:92.11:92,0,120	0/0:29,0:32:78.22:0,78,2153	0/1:10,1:12:62.99:332,0,63	0/0:13,0:13:30.10:0,30,837	0/0:17,0:17:48.16:0,48,1548	0/0:27,0:27:56.93:0,57,1558	0/1:19,0:20:99:148,0,118	0/1:12,2:15:99:112,0,119	1/1:13,0:13:0.50:65,0,0	0/0:19,0:19:51.18:0,51,1626	0/0:25,0:25:68.56:0,69,1687	0/0:22,0:20:60.20:0,60,1576	0/0:11,0:11:27.09:0,27,895
chr10	51288155	.	GCGCGCGCA	G	399.27	PASS	AB=0.961;AC=12;AF=0.214;AN=56;BaseQRankSum=6.195;DP=467;FS=8.199;HRun=0;HaplotypeScore=157.3910;InbreedingCoeff=-0.0720;MQ=55.47;MQ0=2;MQRankSum=0.182;QD=2.54;ReadPosRankSum=-2.783;VQSLOD=1.5445;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:9.82:0,10,123	0/1:6,2:8:7.30:7,0,119	0/1:7,0:5:53.26:53,0,241	0/0:12,0:4:3.45:0,3,23	0/0:15,0:15:45.10:0,45,1363	0/0:13,0:12:23.93:0,24,379	0/0:11,5:14:5.14:0,5,83	0/0:22,0:22:63.16:0,63,1985	0/1:11,0:11:38.48:38,0,992	0/0:20,0:20:60.21:0,60,2273	0/0:12,0:12:32.99:0,33,1272	0/1:28,0:28:99:113,0,399	0/1:15,0:15:99:100,0,482	0/0:22,0:22:57.18:0,57,2249	1/1:16,4:19:13.99:111,14,0	0/1:17,5:22:42.91:43,0,379	0/0:30,0:30:78.24:0,78,2854	0/1:10,0:10:50.83:51,0,197	0/0:11,0:11:30.10:0,30,1219	0/0:18,0:18:51.17:0,51,2078	0/0:23,0:23:57.20:0,57,2072	0/1:15,0:15:15.20:15,0,407	0/1:12,0:12:3.82:4,0,383	0/1:9,0:8:14.07:14,0,51	0/0:18,0:18:51.18:0,51,2215	0/0:25,0:25:72.19:0,72,2308	0/0:21,0:19:60.21:0,60,2264	0/0:11,0:11:27.09:0,27,1198
chr10	51288932	.	CAACAACAACAAT	C	14239.33	PASS	AB=0.517;AC=23;AF=0.411;AN=56;BaseQRankSum=16.303;DP=756;FS=7.585;HRun=0;HaplotypeScore=235.4621;InbreedingCoeff=0.9092;MQ=55.03;MQ0=2;MQRankSum=-16.299;QD=46.23;ReadPosRankSum=6.225;VQSLOD=3.2763;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,42:47:45.15:1364,45,0	1/1:1,10:11:23.97:678,24,0	0/0:28,0:22:60.21:0,60,2327	0/0:22,0:19:37.59:0,38,1638	0/0:30,0:30:81.21:0,81,3517	1/1:3,17:20:30.10:1047,30,0	1/1:3,21:24:27.09:878,27,0	0/0:42,0:42:93.30:0,93,3859	0/0:33,0:33:90.29:0,90,4716	0/0:22,0:22:51.17:0,51,2431	0/0:14,0:14:36.02:0,36,1627	1/1:4,32:36:68.75:2482,69,0	1/1:3,23:26:42.03:1472,42,0	0/0:35,0:35:93.32:0,93,4804	1/1:4,39:43:75.26:2412,75,0	0/1:2,28:30:99:1886,0,109	0/0:32,0:32:90.10:0,90,4709	1/1:8,3:11:21:386,21,0	0/0:18,0:17:42.13:0,42,1573	0/0:26,0:26:66.21:0,66,3271	0/0:45,0:45:99:0,126,6227	1/1:1,14:15:33:891,33,0	1/1:2,14:16:6.02:184,6,0	1/1:5,24:29:20.11:561,20,0	0/0:27,0:27:66.21:0,66,3548	0/0:34,0:34:87.17:0,87,3949	0/0:30,0:30:72.23:0,72,3727	0/0:10,0:10:30.09:0,30,1325
chr10	51289430	.	G	GA	1899.89	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-11.358;DP=702;FS=0.487;HRun=8;HaplotypeScore=65.3002;InbreedingCoeff=0.9965;MQ=77.43;MQ0=0;MQRankSum=-3.424;QD=26.03;ReadPosRankSum=0.554;VQSLOD=4.3224;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,27:31:78.23:900,78,0	0/0:9,0:9:17.99:0,18,160	0/0:19,0:19:45.65:0,46,370	0/0:21,0:21:44.96:0,45,398	0/0:42,0:42:99:0,114,1043	1/1:2,21:23:54.16:623,54,0	1/1:1,18:19:45.13:519,45,0	0/0:44,0:44:99:0,109,947	0/0:18,0:18:51.02:0,51,463	0/0:33,0:33:96.04:0,96,875	0/0:23,0:23:63:0,63,571	0/0:29,0:29:61.19:0,61,694	0/0:31,0:31:80.75:0,81,719	0/0:20,0:20:26.34:0,26,454	0/0:32,0:31:87.04:0,87,796	0/0:32,1:33:58.37:0,58,769	0/0:27,0:27:72.01:0,72,654	0/0:19,0:19:57.03:0,57,521	0/0:18,0:18:44.99:0,45,405	0/0:22,0:22:60.01:0,60,544	0/0:19,0:19:51.03:0,51,467	0/0:27,0:27:78.01:0,78,705	0/0:28,0:28:66:0,66,598	0/0:22,0:22:66.02:0,66,599	0/0:12,0:12:33.01:0,33,302	0/0:25,0:25:72.04:0,72,659	0/0:37,1:38:67.39:0,67,858	0/0:17,0:17:51.03:0,51,467
chr10	51292019	.	G	GTA	5238.76	PASS	AB=0.563;AC=17;AF=0.304;AN=56;BaseQRankSum=-12.272;DP=540;FS=10.491;HRun=0;HaplotypeScore=56.2440;InbreedingCoeff=0.8403;MQ=65.28;MQ0=3;MQRankSum=0.626;QD=34.47;ReadPosRankSum=3.347;VQSLOD=6.6063;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:54.17:0,54,680	1/1:0,3:3:9.03:150,9,0	0/0:4,0:4:3.01:0,3,37	0/0:4,0:3:1.55:0,2,4	0/0:27,0:27:66.21:0,66,830	0/0:25,0:25:72.23:0,72,908	0/0:9,0:9:24.08:0,24,302	0/0:33,0:33:69.22:0,69,870	0/0:25,0:25:63.18:0,63,781	0/0:23,0:23:51.16:0,51,643	0/0:21,0:21:51.14:0,51,628	1/1:4,16:20:45.15:748,45,0	1/1:3,13:15:33.11:549,33,0	0/0:27,0:27:69.22:0,69,870	1/1:1,18:19:39.13:648,39,0	1/1:6,17:22:7.29:660,7,0	0/0:21,0:21:54.17:0,54,682	1/1:2,20:21:48.16:798,48,0	0/0:18,0:18:48.14:0,48,593	0/0:15,0:15:36.12:0,36,454	0/0:20,0:20:57.14:0,57,689	1/1:2,13:16:39.12:625,39,0	1/1:3,12:15:36.12:598,36,0	0/1:4,14:18:39.60:463,0,40	0/0:20,0:20:39.12:0,39,492	0/0:24,0:24:69.22:0,69,870	0/0:34,0:34:78.25:0,78,984	0/0:14,0:14:39.12:0,39,492
chr10	51292429	.	TTGTGTGTGTGTGTGTG	T	11367.01	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=13.297;DP=718;FS=2.106;HRun=0;HaplotypeScore=293.4061;InbreedingCoeff=0.9410;MQ=60.72;MQ0=6;MQRankSum=-11.262;QD=37.03;ReadPosRankSum=1.049;VQSLOD=3.5362;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:28,11:40:21.07:828,21,0	1/1:5,3:8:6.02:264,6,0	0/0:24,0:16:9.03:0,9,300	0/0:32,0:19:24.08:0,24,677	0/0:22,0:22:36.12:0,36,2331	1/1:8,13:22:27.09:1169,27,0	1/1:17,1:18:3.01:132,3,0	0/0:29,0:29:51.17:0,51,2424	0/0:19,0:19:33.07:0,33,1565	0/0:20,0:20:30.10:0,30,1714	0/0:13,0:15:24.07:0,24,1250	1/1:18,15:33:33.11:1434,33,0	1/1:13,17:31:42.14:1790,42,0	0/0:28,0:28:54.19:0,54,3632	1/1:18,14:34:36.12:1546,36,0	1/1:18,11:29:24.08:1058,24,0	0/0:33,0:35:93.32:0,93,6270	1/1:10,7:19:18.06:752,18,0	0/0:29,0:28:21.34:0,21,1159	0/0:19,0:19:43.02:0,43,2450	0/0:57,0:59:84.27:0,84,4557	1/1:14,12:26:33.07:1335,33,0	1/1:14,7:21:15.01:549,15,0	1/1:20,4:25:12.93:510,13,0	0/0:19,0:19:24.08:0,24,1481	0/0:32,0:34:66.23:0,66,3867	0/0:20,0:20:39.13:0,39,2485	0/0:5,0:6:15.05:0,15,1022
chr10	51293972	.	GT	G	3167.22	PASS	AB=0.832;AC=25;AF=0.446;AN=56;BaseQRankSum=2.944;DP=501;FS=4.831;HRun=12;HaplotypeScore=67.7031;InbreedingCoeff=0.7257;MQ=66.71;MQ0=3;MQRankSum=2.665;QD=11.43;ReadPosRankSum=3.180;VQSLOD=3.5074;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,17:22:21.07:266,21,0	1/1:2,6:8:17.75:129,18,0	0/1:19,1:14:34.09:34,0,65	0/0:10,0:6:7.77:0,8,40	0/0:17,0:17:39.42:0,39,366	1/1:5,14:19:38.80:301,39,0	1/1:2,15:17:29.75:224,30,0	0/0:23,3:28:8.99:0,9,408	0/0:9,0:10:23.88:0,24,227	0/0:13,1:15:18.67:0,19,341	0/0:13,0:13:34.27:0,34,310	1/1:9,17:26:53.69:411,54,0	1/1:4,19:23:32.67:353,33,0	0/0:19,1:19:20.10:0,20,371	1/1:7,21:29:61.78:470,62,0	1/1:6,21:28:3.60:378,4,0	0/0:36,0:36:49.36:0,49,663	1/1:6,15:20:13.63:233,14,0	0/1:20,2:21:17.64:18,0,356	0/0:14,0:14:33.87:0,34,307	0/0:8,0:8:14.69:0,15,127	0/1:4,6:10:17.68:109,0,18	1/1:8,4:12:16.82:115,17,0	1/1:4,15:19:21.01:341,21,0	0/0:8,0:8:24.02:0,24,227	0/0:18,0:18:42.04:0,42,404	0/0:21,0:24:60.63:0,61,565	0/0:3,0:3:9.02:0,9,91
chr10	51303104	.	G	GA	3872.67	PASS	AB=0.857;AC=24;AF=0.429;AN=56;BaseQRankSum=4.551;DP=586;FS=6.357;HRun=12;HaplotypeScore=93.5765;InbreedingCoeff=0.7717;MQ=61.43;MQ0=5;MQRankSum=-5.276;QD=15.01;ReadPosRankSum=1.384;VQSLOD=4.1909;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,2:23:42.70:211,43,0	0/1:6,4:10:6.92:93,0,7	0/0:12,0:10:7.93:0,8,105	0/1:11,0:10:27.92:29,0,28	0/0:27,0:29:67:0,67,470	1/1:16,2:31:57.74:337,58,0	1/1:9,1:11:2.60:102,3,0	0/0:20,0:20:26.92:0,27,217	0/0:15,0:17:39.32:0,39,258	0/0:27,0:27:66.04:0,66,479	0/0:25,0:25:41.59:0,42,299	1/1:10,4:17:43.39:365,43,0	1/1:10,9:19:38.15:328,38,0	0/0:17,0:18:37.29:0,37,251	1/1:8,16:24:50.57:473,51,0	1/1:6,13:19:10.48:422,10,0	0/0:26,0:27:34.04:0,34,395	1/1:13,14:25:57:533,57,0	0/0:22,2:25:2.07:0,2,320	0/0:26,0:27:51.72:0,52,362	0/0:15,0:15:10.04:0,10,190	1/1:4,12:17:32.83:290,33,0	1/1:5,9:16:4.80:182,5,0	1/1:13,14:27:40.02:509,40,0	0/0:26,0:25:50.66:0,51,369	0/0:16,0:16:24.30:0,24,176	0/0:31,0:30:71.32:0,71,505	0/0:10,0:11:28.88:0,29,203
chr10	51303143	.	T	TGTGTGGCTTGGGGAGGAACC	26859.32	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=2.251;DP=639;FS=1.689;HRun=0;HaplotypeScore=289.7749;InbreedingCoeff=0.9968;MQ=66.16;MQ0=1;MQRankSum=-15.454;QD=93.26;ReadPosRankSum=1.453;VQSLOD=4.3425;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:15,3:28:21.06:1169,21,0	1/1:2,3:8:15.05:1176,15,0	0/0:29,0:28:54.30:0,54,2510	0/0:19,0:19:42.14:0,42,1756	0/0:29,0:29:60.21:0,60,2972	1/1:16,7:33:54.15:2937,54,0	1/1:12,2:22:33.03:1994,33,0	0/0:25,0:25:57.18:0,57,2335	0/0:20,0:20:57.17:0,57,2830	0/0:32,0:32:81.26:0,81,3760	0/0:20,0:20:57.20:0,57,2503	1/1:9,8:27:42.13:3312,42,0	1/1:14,3:24:39.11:2587,39,0	0/0:12,0:12:36.12:0,36,1851	1/1:12,6:35:48.06:3253,48,0	1/1:11,6:23:42.14:3077,42,0	0/0:24,0:24:66.21:0,66,3230	1/1:10,5:20:30.10:2520,30,0	0/0:20,0:20:51.17:0,51,2127	0/0:24,0:24:54.15:0,54,2449	0/0:18,0:18:48.13:0,48,2476	1/1:20,1:21:30.10:1579,30,0	1/1:19,1:20:29.99:1204,30,0	1/1:14,3:23:30.10:2053,30,0	0/0:22,0:22:54.17:0,54,2609	0/0:16,0:16:45.15:0,45,1930	0/0:31,0:31:78.05:0,78,3513	0/0:10,0:10:30.10:0,30,1502
chr10	51308013	.	T	TG	15786.16	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-18.885;DP=816;FS=1.827;HRun=1;HaplotypeScore=76.4038;InbreedingCoeff=0.9997;MQ=82.79;MQ0=0;MQRankSum=-0.265;QD=41.11;ReadPosRankSum=3.708;VQSLOD=5.4017;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,61:63:99:2742,184,0	1/1:2,8:10:24.08:355,24,0	0/0:26,0:26:69.20:0,69,861	0/0:24,0:24:63.13:0,63,770	0/0:27,0:27:78.25:0,78,1013	1/1:0,13:12:36.12:539,36,0	1/1:0,32:32:90.30:1349,90,0	0/0:25,0:25:63.20:0,63,806	0/0:24,0:24:69.21:0,69,882	0/0:25,0:25:75.24:0,75,964	0/0:13,0:13:39.11:0,39,492	1/1:1,46:47:99:1709,114,0	1/1:1,32:33:90.30:1347,90,0	0/0:39,0:39:99:0,114,1480	1/1:0,30:30:81.27:1214,81,0	1/1:2,42:44:48.50:1721,49,0	0/0:22,0:22:66.19:0,66,841	1/1:0,22:22:60.20:899,60,0	0/0:25,0:25:72.13:0,72,921	0/0:33,0:33:96.30:0,96,1232	0/0:39,0:39:99:0,108,1403	1/1:0,32:32:93.32:1394,93,0	1/1:0,22:22:63.21:943,63,0	1/1:0,36:36:99:1573,105,0	0/0:20,0:20:57.18:0,57,736	0/0:42,0:42:99:0,120,1559	0/0:33,0:32:99:0,99,1283	0/0:15,0:15:42.14:0,42,545
chr10	51315116	.	ATCTTTCAGCT	A	19594.80	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=18.834;DP=693;FS=5.287;HRun=0;HaplotypeScore=219.3309;InbreedingCoeff=0.9988;MQ=83.07;MQ0=0;MQRankSum=-19.823;QD=66.88;ReadPosRankSum=4.018;VQSLOD=3.8290;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,45:49:99:3389,111,0	1/1:1,8:9:24.08:774,24,0	0/0:23,0:23:57.20:0,57,2510	0/0:26,0:26:54.66:0,55,2641	0/0:16,0:16:48.16:0,48,2420	1/1:5,18:23:51.14:1574,51,0	1/1:6,26:32:69.24:2185,69,0	0/0:36,0:36:81.28:0,81,3869	0/0:24,0:24:72.25:0,72,3754	0/0:36,0:36:99:0,105,5251	0/0:7,0:7:21.06:0,21,898	1/1:4,28:32:57.20:1842,57,0	1/1:2,21:23:53.52:1746,54,0	0/0:37,0:37:99:0,105,5422	1/1:1,25:26:60.21:1940,60,0	1/1:6,20:26:51.18:1648,51,0	0/0:31,0:31:90.31:0,90,4609	1/1:2,16:18:30.10:930,30,0	0/0:26,0:26:75.24:0,75,3357	0/0:12,0:12:30.10:0,30,1520	0/0:46,0:46:99:0,132,6697	1/1:1,21:22:54.14:1667,54,0	1/1:1,13:14:27.03:812,27,0	1/1:4,15:19:36.05:1088,36,0	0/0:18,0:18:54.19:0,54,2830	0/0:33,0:33:87.29:0,87,4109	0/0:15,0:15:45.15:0,45,2180	0/0:14,0:14:42.14:0,42,2151
chr10	51321347	.	A	AAGAC	19052.51	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-17.121;DP=735;FS=1.297;HRun=0;HaplotypeScore=114.0712;InbreedingCoeff=0.9998;MQ=81.87;MQ0=2;MQRankSum=-5.328;QD=61.07;ReadPosRankSum=6.347;VQSLOD=6.6778;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,45:51:99:3311,123,0	1/1:2,11:13:28.60:817,29,0	0/0:31,0:31:90:0,90,1504	0/0:21,0:21:50.88:0,51,891	0/0:40,0:40:99:0,108,2018	1/1:1,16:18:33.05:903,33,0	1/1:3,19:22:48.16:1312,48,0	0/0:28,0:28:72.22:0,72,1295	0/0:19,0:19:57.20:0,57,1105	0/0:25,0:25:69.22:0,69,1267	0/0:20,0:20:57.20:0,57,1080	1/1:0,18:18:48.16:1312,48,0	1/1:0,18:18:41.95:1148,42,0	0/0:19,0:19:57.18:0,57,1041	1/1:1,29:30:66.10:1805,66,0	1/1:2,25:26:61.89:1719,62,0	0/0:42,0:42:99:0,123,2259	1/1:0,30:30:69.24:1885,69,0	0/0:25,0:25:72.20:0,72,1285	0/0:34,0:34:99:0,99,1886	0/0:31,0:31:90.31:0,90,1743	1/1:6,15:20:45.14:1170,45,0	1/1:2,34:35:90.11:2390,90,0	1/1:2,24:26:49.05:1280,49,0	0/0:15,0:15:45.15:0,45,872	0/0:25,0:25:72.24:0,72,1352	0/0:24,0:24:60.21:0,60,1163	0/0:24,0:24:69.23:0,69,1306
chr10	51321427	.	TA	T	184.97	PASS	AB=0.950;AC=4;AF=0.071;AN=56;BaseQRankSum=-1.043;DP=688;FS=0.000;HRun=13;HaplotypeScore=124.0695;InbreedingCoeff=0.3996;MQ=70.86;MQ0=4;MQRankSum=0.355;QD=2.26;ReadPosRankSum=-1.992;VQSLOD=0.1757;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:59.50:0,60,267	0/0:10,0:10:25.68:0,26,119	0/0:31,0:13:3.29:0,3,65	0/1:34,0:18:8.94:9,0,65	0/0:33,0:34:73.20:0,73,651	0/0:22,0:22:44.65:0,45,204	0/0:14,0:14:30:0,30,133	0/0:31,2:33:27.08:0,27,540	0/0:13,0:13:30.05:0,30,292	1/1:7,14:21:35.63:257,36,0	0/0:21,0:21:42.04:0,42,397	0/0:18,0:18:42.74:0,43,193	0/0:22,0:21:53.04:0,53,242	0/0:22,2:25:13.29:0,13,318	0/0:35,0:35:80.52:0,81,365	0/0:35,0:34:73.01:0,73,333	0/0:28,0:28:69.08:0,69,660	0/0:37,0:37:77.27:0,77,348	0/0:32,0:32:43.54:0,44,447	0/1:24,3:27:31.30:31,0,345	0/0:14,1:16:7.96:0,8,220	0/0:25,0:24:61.44:0,61,284	0/0:26,0:25:48.31:0,48,217	0/0:19,0:18:35.29:0,35,166	0/0:17,0:17:17.70:0,18,374	0/0:25,2:27:13.34:0,13,436	0/0:17,2:20:25.99:0,26,395	0/0:17,1:18:20.16:0,20,358
chr10	51321432	.	A	AAAG	13797.44	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-14.523;DP=708;FS=2.097;HRun=0;HaplotypeScore=103.5802;InbreedingCoeff=0.9678;MQ=67.66;MQ0=5;MQRankSum=-1.972;QD=47.25;ReadPosRankSum=6.135;VQSLOD=6.6027;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,21:27:72.22:1371,72,0	1/1:3,7:11:33.08:544,33,0	0/0:33,0:10:1.10:0,1,96	0/0:35,0:18:23.08:0,23,228	0/0:36,0:36:96.03:0,96,1264	1/1:9,13:22:54.17:1000,54,0	1/1:2,15:17:33.09:652,33,0	0/0:35,0:35:92.32:0,92,1220	0/0:12,0:12:33.08:0,33,510	0/0:26,0:26:63.08:0,63,624	0/0:18,0:18:54.14:0,54,764	1/1:1,17:20:48.14:952,48,0	1/1:1,20:21:57.20:1136,57,0	0/0:22,0:22:60.04:0,60,771	1/1:9,26:35:93.28:1738,93,0	1/1:7,25:32:90.24:1611,90,0	0/0:29,0:29:81.01:0,81,1156	1/1:13,22:36:93.16:1589,93,0	0/0:26,0:26:75.02:0,75,942	0/0:32,0:32:84.20:0,84,1094	0/0:15,0:15:32.98:0,33,439	1/1:2,24:26:66.10:1259,66,0	1/1:11,14:25:71.85:1089,72,0	1/1:5,15:19:45.12:856,45,0	0/0:21,0:21:54.15:0,54,777	0/0:31,0:31:84.19:0,84,1074	0/0:26,0:26:66.04:0,66,873	0/0:18,0:18:54.14:0,54,773
chr10	51322845	.	AT	A	5306.80	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=11.586;DP=597;FS=1.466;HRun=9;HaplotypeScore=63.3339;InbreedingCoeff=0.9623;MQ=83.42;MQ0=1;MQRankSum=-2.278;QD=22.97;ReadPosRankSum=3.905;VQSLOD=5.6596;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,27:29:66.03:604,66,0	1/1:3,14:17:42.02:384,42,0	0/0:36,0:31:41.57:0,42,576	0/0:13,0:11:27.17:0,27,257	0/0:22,0:22:54.16:0,54,623	1/1:3,16:19:39.02:357,39,0	1/1:1,9:10:24.01:220,24,0	0/0:41,0:41:93.24:0,93,1045	0/0:12,0:12:30.07:0,30,335	0/0:30,0:30:81.24:0,81,928	0/0:23,0:23:60.01:0,60,670	1/1:0,22:22:54.01:494,54,0	1/1:0,22:22:66.04:604,66,0	0/0:22,0:22:57:0,57,611	1/1:1,20:21:54.03:494,54,0	1/1:3,17:20:48.02:439,48,0	0/0:24,0:24:40.27:0,40,647	1/1:0,15:15:42.02:384,42,0	0/0:19,0:19:48.13:0,48,546	0/0:31,0:31:90.26:0,90,1025	0/0:6,0:6:0.59:0,1,64	1/1:1,23:24:66.03:604,66,0	1/1:1,18:19:51.02:467,51,0	1/1:2,11:13:13.16:255,13,0	0/0:20,0:20:51.14:0,51,581	0/0:24,0:24:72.20:0,72,823	0/0:22,0:22:66.17:0,66,743	0/0:21,0:21:54.15:0,54,614
chr10	51331995	.	ATG	A	2234.22	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=11.619;DP=835;FS=0.460;HRun=0;HaplotypeScore=90.4126;InbreedingCoeff=0.8358;MQ=60.16;MQ0=11;MQRankSum=-1.960;QD=16.43;ReadPosRankSum=0.113;VQSLOD=3.0622;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,27:30:60.19:764,60,0	0/0:19,1:20:15.99:0,16,815	0/1:44,0:15:11.65:12,0,46	0/0:52,0:20:15.35:0,15,307	0/0:32,0:32:84.24:0,84,1321	1/1:2,24:26:57.15:708,57,0	1/1:5,29:34:72.19:898,72,0	0/0:36,0:36:84.29:0,84,1399	0/0:30,0:30:69.24:0,69,1146	0/0:35,0:35:96.33:0,96,1581	0/0:21,0:21:22.01:0,22,905	0/0:22,1:23:22.01:0,22,903	0/0:20,1:21:24.98:0,25,925	0/0:32,1:33:49.18:0,49,1337	0/0:31,0:30:90.31:0,90,1504	0/0:16,0:16:42.14:0,42,684	0/0:27,0:27:69.24:0,69,1149	0/0:24,0:24:63.22:0,63,1043	0/0:21,0:20:36.42:0,36,671	0/0:35,0:35:90.30:0,90,1454	0/0:36,0:36:96.33:0,96,1596	0/0:39,0:39:99:0,105,1695	0/0:32,0:32:81.24:0,81,1296	0/0:28,0:28:81.28:0,81,1341	0/0:40,0:40:80.01:0,80,1772	0/0:34,0:34:90.31:0,90,1500	0/0:24,0:23:54.17:0,54,874	0/0:9,0:9:27.02:0,27,368
chr10	51332676	.	A	AAC	569.05	PASS	AB=1.000;AC=27;AF=0.519;AN=52;BaseQRankSum=4.184;DP=655;FS=1.677;HRun=0;HaplotypeScore=111.0274;InbreedingCoeff=0.3100;MQ=59.50;MQ0=19;MQRankSum=0.688;QD=1.46;ReadPosRankSum=-0.123;VQSLOD=2.3106;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:38,0:38:8.52:90,9,0	0/1:9,0:9:0:0,0,0	./.	./.	0/0:19,0:21:17.19:0,17,125	0/1:21,0:19:46.24:87,0,46	0/1:25,0:24:46.57:124,0,47	0/1:26,0:26:1.61:2,0,25	0/1:21,0:21:0.06:0,0,174	0/1:26,0:25:17.16:17,0,113	0/0:13,0:13:3:0,3,26	1/1:20,0:20:5.97:46,6,0	1/1:25,0:24:11.92:89,12,0	0/1:22,0:22:16.66:17,0,99	1/1:26,0:25:11.96:94,12,0	1/1:29,0:29:5:28,5,0	0/0:38,0:36:23.73:0,24,254	1/1:21,0:21:0.13:1,0,0	1/1:14,0:13:2.51:7,3,0	0/0:18,0:18:9.01:0,9,88	0/0:57,0:56:3.64:0,4,220	1/1:21,0:21:5.06:16,5,0	1/1:15,0:15:2.59:20,3,0	1/1:19,13:32:5.87:89,6,0	0/0:16,0:16:6.01:0,6,65	0/0:21,0:21:12.16:0,12,112	0/0:20,0:20:9.26:0,9,40	0/0:6,0:6:4.17:0,4,43
chr10	51332718	.	C	CGCACACACAT	1167.43	PASS	AB=0.765;AC=14;AF=0.250;AN=56;BaseQRankSum=4.401;DP=739;FS=0.600;HRun=0;HaplotypeScore=213.7733;InbreedingCoeff=0.6610;MQ=62.19;MQ0=6;MQRankSum=-2.201;QD=5.40;ReadPosRankSum=0.066;VQSLOD=1.9698;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:33,0:33:6.78:241,7,0	0/0:7,0:7:2.15:0,2,6	0/0:35,0:19:52.51:0,53,826	0/0:36,0:22:66.04:0,66,1043	0/0:20,0:20:54.59:0,55,899	0/0:6,0:17:20.97:0,21,183	0/0:5,0:31:18.47:0,18,238	0/0:31,0:29:63.40:0,63,1084	0/0:29,0:29:63.08:0,63,1058	0/0:33,0:33:85.86:0,86,1257	0/0:11,0:11:21.04:0,21,347	0/1:4,1:35:26.10:139,0,26	0/1:21,0:21:12.76:185,0,13	0/0:38,0:38:85.08:0,85,1233	1/1:21,0:20:12.84:278,13,0	1/1:8,0:38:3.72:23,4,0	0/0:37,0:36:81.57:0,82,1481	1/1:12,0:12:8.61:211,9,0	0/0:16,0:16:41.96:0,42,560	0/0:16,0:16:41.80:0,42,655	0/0:65,0:64:99:0,162,2508	0/0:4,0:25:1.24:0,1,3	1/1:18,0:18:11.42:144,11,0	1/1:38,0:37:4.05:113,4,0	0/0:25,0:25:57.33:0,57,905	0/0:19,0:19:56.90:0,57,975	0/0:21,0:21:59.58:0,60,778	0/0:9,0:9:26.83:0,27,428
chr10	51332868	.	TG	T	4390.64	PASS	AB=0.840;AC=36;AF=0.643;AN=56;BaseQRankSum=1.181;DP=583;FS=1.438;HRun=11;HaplotypeScore=77.5656;InbreedingCoeff=0.1705;MQ=75.75;MQ0=0;MQRankSum=0.404;QD=8.53;ReadPosRankSum=3.249;VQSLOD=3.8421;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,16:27:55.60:443,56,0	0/0:5,0:10:5.99:0,6,50	0/1:15,2:18:35.77:98,0,36	0/1:20,1:21:61.38:74,0,61	1/1:9,6:15:18.44:148,18,0	0/0:13,0:20:23.53:0,24,186	0/1:19,2:26:0.09:0,0,280	1/1:15,16:31:38.10:316,38,0	1/1:6,15:22:18.33:343,18,0	1/1:13,10:23:29.90:246,30,0	1/1:5,15:22:40.02:307,40,0	0/1:18,3:21:25.21:25,0,168	0/1:11,2:13:3.61:4,0,157	1/1:11,11:24:48.86:370,49,0	0/0:11,0:18:17.51:0,18,125	0/1:8,1:19:4.07:4,0,118	1/1:18,24:43:57.23:576,57,0	0/0:16,0:19:34.04:0,34,260	1/1:6,4:11:19.98:149,20,0	1/1:13,3:17:28.96:225,29,0	0/1:12,7:20:32:170,0,32	0/1:23,2:25:12.99:13,0,263	0/1:15,3:18:28.13:28,0,139	0/1:20,5:25:71.78:72,0,319	0/1:8,9:18:3:171,0,3	1/1:12,9:23:36.96:275,37,0	0/1:12,8:21:22.01:186,0,22	1/1:5,6:11:17.98:148,18,0
chr10	51336201	.	GGTGT	G	2497.54	PASS	AB=0.794;AC=23;AF=0.442;AN=52;BaseQRankSum=7.571;DP=585;FS=1.926;HRun=0;HaplotypeScore=125.4998;InbreedingCoeff=0.6241;MQ=50.86;MQ0=35;MQRankSum=-6.265;QD=9.42;ReadPosRankSum=1.344;VQSLOD=2.7371;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:30:18.42:48,0,18	0/1:3,4:6:17.28:127,0,17	./.	./.	0/0:14,0:13:6.02:0,6,121	1/1:8,0:14:23.63:233,24,0	1/1:16,0:18:6.01:56,6,0	0/0:30,0:25:8.86:0,9,126	0/0:19,0:19:27.09:0,27,590	0/0:20,0:21:23.77:0,24,363	0/0:9,0:9:8.97:0,9,189	1/1:15,9:24:18.05:260,18,0	1/1:9,6:15:2.54:162,3,0	0/0:11,0:12:15.92:0,16,308	1/1:16,9:26:26.14:451,26,0	1/1:12,13:25:36.10:537,36,0	0/0:27,1:30:3.87:0,4,822	1/1:12,0:16:15.02:141,15,0	0/0:24,0:23:35.43:0,35,579	0/0:19,0:21:26.81:0,27,527	0/0:41,0:41:47.95:0,48,911	1/1:7,6:13:1.12:116,1,0	1/1:12,4:17:15.04:212,15,0	1/1:18,12:31:20.67:326,21,0	0/1:24,0:24:21.83:22,0,307	0/0:27,0:25:23.80:0,24,356	0/0:16,0:16:33.10:0,33,699	0/0:14,0:17:23.28:0,23,322
chr10	51341834	.	TTCTTCCTCC	T	769.45	PASS	AC=6;AF=0.111;AN=54;BaseQRankSum=5.013;DP=463;FS=8.115;HRun=0;HaplotypeScore=118.0953;InbreedingCoeff=0.7596;MQ=50.15;MQ0=26;MQRankSum=-5.135;QD=20.80;ReadPosRankSum=0.023;VQSLOD=2.3813;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:10,2:8:18.04:359,18,0	./.	0/0:41,0:11:5.84:0,6,77	0/0:65,0:18:9.15:0,9,394	0/0:24,0:23:57.19:0,57,2017	1/1:7,3:10:18.06:431,18,0	1/1:4,11:15:6.02:109,6,0	0/0:19,0:17:36.08:0,36,816	0/0:18,0:18:45.15:0,45,1592	0/0:20,0:19:36.12:0,36,1352	0/0:18,0:18:42.14:0,42,1447	0/0:8,0:7:18.06:0,18,651	0/0:13,0:11:33.09:0,33,974	0/0:13,0:13:27.08:0,27,1034	0/0:10,0:8:21.07:0,21,841	0/0:11,0:11:18.06:0,18,601	0/0:24,0:23:62.50:0,63,2395	0/0:6,0:5:6.02:0,6,151	0/0:19,0:15:36.11:0,36,1036	0/0:20,0:20:57.19:0,57,1969	0/0:22,0:21:53.12:0,53,1315	0/0:10,0:9:17.98:0,18,428	0/0:10,0:9:17.69:0,18,389	0/0:6,0:5:3:0,3,95	0/0:19,0:19:48.14:0,48,1607	0/0:17,0:17:39.11:0,39,1258	0/0:5,0:5:6.02:0,6,224	0/0:5,0:4:9.03:0,9,423
chr10	51343816	.	TACACACACACAC	T	983.20	PASS	AB=0.793;AC=14;AF=0.259;AN=54;BaseQRankSum=6.450;DP=545;FS=0.996;HRun=0;HaplotypeScore=172.1643;InbreedingCoeff=0.3277;MQ=64.71;MQ0=26;MQRankSum=-4.512;QD=5.59;ReadPosRankSum=0.542;VQSLOD=2.3715;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:17,0:24:0.55:39,0,1	0/0:5,0:5:4.50:0,4,21	./.	0/0:43,0:16:3.01:0,3,44	0/0:22,0:24:26.97:0,27,687	0/1:13,0:12:15.47:15,0,41	0/0:28,0:27:3.26:0,3,93	0/0:17,0:17:9.01:0,9,94	0/0:10,0:14:9.03:0,9,340	0/0:24,0:24:36.12:0,36,1475	0/0:14,0:14:21.07:0,21,903	1/1:11,10:21:12.04:402,12,0	0/1:6,3:9:34.69:97,0,35	0/0:11,0:10:12.02:0,12,437	0/1:8,0:22:6.25:105,0,6	0/1:7,0:13:13.51:14,0,30	0/0:21,0:21:21.07:0,21,835	0/1:14,0:15:26.76:27,0,117	0/0:19,0:19:20.08:0,20,383	0/0:18,0:21:21.07:0,21,810	0/0:18,0:19:33.09:0,33,1047	1/1:13,3:16:2.92:17,3,0	1/1:7,9:15:9.03:307,9,0	1/1:27,0:27:5.48:118,5,0	0/0:22,0:22:21.07:0,21,679	0/0:14,0:14:27.09:0,27,1053	0/0:21,0:21:45.10:0,45,1654	0/0:5,0:4:9.03:0,9,414
chr10	51346430	.	T	TA	3962.64	PASS	AB=0.613;AC=21;AF=0.375;AN=56;BaseQRankSum=-1.553;DP=634;FS=7.071;HRun=10;HaplotypeScore=78.3834;InbreedingCoeff=0.7482;MQ=60.35;MQ0=24;MQRankSum=1.055;QD=16.72;ReadPosRankSum=0.489;VQSLOD=4.0473;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:18,17:35:59.24:751,59,0	1/1:4,7:11:30.02:294,30,0	0/0:33,0:9:2.99:0,3,59	0/0:18,0:8:11.02:0,11,67	0/0:27,0:27:63.49:0,63,518	1/1:1,10:11:21.05:220,21,0	0/1:4,13:17:19.19:226,0,19	0/0:20,0:15:35.89:0,36,287	0/0:13,0:13:29.89:0,30,239	0/0:32,0:31:80.86:0,81,662	0/0:21,0:21:46.66:0,47,409	1/1:4,11:14:15.04:160,15,0	1/1:7,17:24:39.09:410,39,0	0/0:23,0:23:59.86:0,60,486	1/1:4,20:22:39.08:407,39,0	0/1:6,11:16:20.03:197,0,20	0/0:45,0:44:99:0,101,832	1/1:10,14:24:51.01:517,51,0	0/0:18,0:16:35.90:0,36,295	0/0:20,0:20:33.44:0,33,257	0/0:17,0:17:26.84:0,27,217	0/1:6,6:11:9.60:113,0,10	1/1:12,17:28:42.48:423,42,0	1/1:3,15:17:24.02:244,24,0	0/0:24,0:24:48.74:0,49,392	0/0:33,0:33:65.33:0,65,521	0/0:26,0:26:56.67:0,57,464	0/0:24,0:24:33.92:0,34,385
chr10	51349909	.	A	ACGTAG	21482.64	PASS	AB=0.955;AC=19;AF=0.339;AN=56;BaseQRankSum=-17.888;DP=848;FS=3.241;HRun=0;HaplotypeScore=139.0187;InbreedingCoeff=0.9049;MQ=85.16;MQ0=0;MQRankSum=-5.422;QD=63.75;ReadPosRankSum=4.655;VQSLOD=5.9987;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:81.28:0,81,1634	1/1:3,16:19:51.18:1553,51,0	0/0:35,0:35:93.29:0,93,1798	0/0:22,0:22:57.16:0,57,1089	0/0:34,0:34:99:0,99,1958	0/0:27,0:27:75.24:0,75,1498	0/0:25,0:25:66.21:0,66,1316	0/0:41,0:41:99:0,114,2286	0/0:36,0:36:99:0,102,2013	0/0:32,0:32:84.28:0,84,1690	0/0:19,0:19:54.19:0,54,1096	1/1:9,28:39:87.30:2613,87,0	1/1:5,34:40:93.32:2815,93,0	0/0:38,0:38:99:0,105,2057	1/1:13,35:49:99:3109,102,0	1/1:12,40:52:40.79:2956,41,0	0/0:21,0:20:57.20:0,57,1152	1/1:2,16:19:45.15:1372,45,0	0/0:31,0:31:84.25:0,84,1571	0/1:20,1:21:33.84:34,0,997	0/0:27,0:27:78.27:0,78,1600	1/1:3,34:37:99:3014,99,0	1/1:6,19:25:51.18:1548,51,0	1/1:7,27:35:81.28:2468,81,0	0/0:20,0:20:57.20:0,57,1144	0/0:27,0:27:78.26:0,78,1566	0/0:46,0:46:99:0,135,2751	0/0:2,0:2:6.02:0,6,123
chr10	51352540	.	GGGGT	G	1043.10	PASS	AB=1.000;AC=12;AF=0.214;AN=56;BaseQRankSum=-0.504;DP=513;FS=2.329;HRun=0;HaplotypeScore=86.0276;InbreedingCoeff=0.0863;MQ=68.60;MQ0=49;MQRankSum=0.114;QD=6.25;ReadPosRankSum=3.425;VQSLOD=1.3372;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:27:38.96:0,39,539	0/1:5,0:5:10.99:11,0,121	0/0:24,0:19:23.22:0,23,428	0/0:25,0:17:38.50:0,38,352	0/0:14,0:13:26.78:0,27,247	0/0:9,0:15:2.70:0,3,12	1/1:2,21:23:3.76:22,4,0	0/0:19,0:17:44.97:0,45,401	0/0:16,0:13:4.84:0,5,159	0/0:16,0:16:35.73:0,36,349	0/0:11,0:9:24.02:0,24,325	0/1:18,0:17:11.47:168,0,11	0/1:10,0:6:13.96:14,0,78	0/0:21,0:21:49.58:0,50,621	0/1:12,0:12:12:213,0,12	0/1:12,0:11:45.12:90,0,45	0/0:23,0:21:28.03:0,28,584	0/1:28,0:27:99:355,0,130	0/0:13,0:9:19.83:0,20,179	0/0:12,0:10:21.47:0,21,182	0/0:32,0:26:40.13:0,40,545	0/1:15,0:14:46.64:134,0,47	1/1:14,0:11:15.06:101,15,0	0/1:28,0:27:90.22:90,0,190	0/0:20,0:17:38.62:0,39,389	0/0:20,0:20:31.95:0,32,452	0/0:20,0:16:28.70:0,29,285	0/0:13,0:10:5.84:0,6,389
chr10	51352542	.	GGT	G	217.83	PASS	AB=0.973;AC=14;AF=0.269;AN=52;BaseQRankSum=-0.241;DP=559;FS=3.150;HRun=0;HaplotypeScore=82.5224;InbreedingCoeff=0.1660;MQ=63.18;MQ0=62;MQRankSum=2.454;QD=1.08;ReadPosRankSum=0.619;VQSLOD=1.6843;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:32,0:29:22.21:22,0,107	0/0:7,0:7:9:0,9,88	./.	./.	1/1:14,0:12:6.63:34,7,0	0/0:18,0:15:2.74:0,3,12	1/1:24,0:23:2.97:20,3,0	0/0:19,0:16:5.87:0,6,35	1/1:12,0:13:8.60:66,9,0	0/0:16,0:16:11.57:0,12,83	0/0:11,0:8:6.02:0,6,88	0/0:19,0:19:3:0,3,25	0/0:15,0:10:8.91:0,9,65	0/1:21,0:21:48.07:48,0,93	0/0:13,0:13:3.01:0,3,39	0/0:17,0:15:6:0,6,63	0/1:23,0:19:41.90:42,0,142	0/0:35,0:32:28.99:0,29,222	1/1:15,1:12:5.05:40,5,0	0/0:14,0:11:0:0,0,0	0/0:35,0:28:14.94:0,15,123	0/0:17,0:16:6:0,6,64	0/0:17,0:14:0:0,0,0	0/0:35,0:34:17.76:0,18,177	0/1:22,0:18:41.38:52,0,41	0/0:21,0:21:9.05:0,9,93	0/1:17,4:17:10.62:12,0,11	0/1:13,0:10:26.86:27,0,100
chr10	51352598	.	C	CGT	2344.51	PASS	AB=0.571;AC=12;AF=0.214;AN=56;BaseQRankSum=-1.930;DP=485;FS=50.005;HRun=0;HaplotypeScore=76.5083;InbreedingCoeff=0.4924;MQ=64.71;MQ0=27;MQRankSum=2.330;QD=13.71;ReadPosRankSum=3.743;VQSLOD=1.1424;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:29:44.52:750,45,0	0/0:1,8:10:2.99:0,3,24	0/0:6,0:5:2.99:0,3,24	0/0:8,0:6:0.73:0,1,30	0/0:15,0:14:33:0,33,353	1/1:19,0:19:35.04:511,35,0	1/1:30,0:29:69.03:889,69,0	0/0:20,0:17:50.25:0,50,522	0/0:13,0:12:19.35:0,19,206	0/0:11,0:11:30.01:0,30,367	0/0:7,0:7:18.06:0,18,259	0/1:5,16:20:8.87:22,0,9	0/1:6,10:14:18.44:20,0,18	0/0:24,0:24:56.85:0,57,669	1/1:0,13:14:3.01:58,3,0	0/1:3,11:15:0:1,0,0	0/0:17,0:16:42.07:0,42,533	0/1:5,18:21:27.37:251,0,27	0/0:12,0:11:30.04:0,30,359	0/0:11,0:9:24.02:0,24,259	0/0:31,0:29:63:0,63,749	0/0:3,10:13:2.98:0,3,22	0/0:1,8:9:0:0,0,0	0/0:10,33:41:14.12:0,14,104	0/0:16,0:14:30.02:0,30,354	0/0:23,0:22:60.03:0,60,726	0/0:14,0:11:23.39:0,23,245	0/0:9,0:8:16.98:0,17,176
chr10	51356201	.	G	GGTGTGT	2486.98	PASS	AB=0.842;AC=21;AF=0.404;AN=52;BaseQRankSum=0.197;DP=750;FS=13.961;HRun=0;HaplotypeScore=172.3579;InbreedingCoeff=0.6543;MQ=59.90;MQ0=34;MQRankSum=-1.337;QD=8.26;ReadPosRankSum=0.857;VQSLOD=2.0937;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:21:33.49:0,33,568	1/1:6,0:7:5.89:82,6,0	./.	./.	0/0:17,0:19:21.07:0,21,325	1/1:5,6:16:6.02:149,6,0	1/1:20,15:38:5.17:133,5,0	0/0:21,0:20:3.64:0,4,72	0/1:21,0:21:10.69:11,0,342	0/0:21,0:20:24.06:0,24,359	0/0:11,0:12:21.06:0,21,352	1/1:18,8:27:3.01:39,3,0	1/1:14,10:28:6.91:93,7,0	0/0:20,0:20:10.52:0,11,193	1/1:31,2:36:15.04:367,15,0	1/1:15,0:18:17.08:267,17,0	0/0:28,0:32:45.93:0,46,757	1/1:24,0:32:12.93:526,13,0	0/0:19,0:16:4.33:0,4,69	0/0:16,0:16:15.04:0,15,248	0/0:68,0:78:76.90:0,77,1181	0/1:5,7:13:0:0,0,0	1/1:14,0:19:24.08:483,24,0	0/1:35,3:39:30.92:519,0,31	0/0:12,0:12:12.04:0,12,195	0/0:19,0:19:24.05:0,24,351	0/0:13,0:14:24.08:0,24,428	0/0:10,0:10:17.64:0,18,242
chr10	51356277	.	CGT	C	6053.39	PASS	AB=0.844;AC=27;AF=0.482;AN=56;BaseQRankSum=13.727;DP=766;FS=0.000;HRun=0;HaplotypeScore=149.5240;InbreedingCoeff=0.6807;MQ=52.30;MQ0=17;MQRankSum=-0.012;QD=17.55;ReadPosRankSum=5.122;VQSLOD=4.4819;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,18:26:26.19:288,26,0	1/1:1,8:9:17.89:200,18,0	0/0:44,0:5:8.97:0,9,93	0/0:46,0:9:19.34:0,19,275	0/0:29,0:29:72.25:0,72,1166	1/1:6,10:16:28.72:304,29,0	1/1:7,26:34:19.08:834,19,0	0/0:27,0:27:54.18:0,54,843	0/0:18,0:18:45.14:0,45,700	0/0:29,0:30:59.61:0,60,1127	0/0:17,0:18:34.04:0,34,672	1/1:4,23:28:48.10:588,48,0	1/1:6,23:29:69.20:836,69,0	0/1:26,3:29:33.35:33,0,963	1/1:6,26:32:69.20:838,69,0	0/1:4,16:22:10.07:416,0,10	0/0:35,0:34:79.10:0,79,1209	1/1:4,15:19:50.44:590,50,0	0/1:14,1:15:4.09:4,0,442	0/1:14,2:16:10.12:10,0,366	0/0:100,3:102:99:0,109,3197	1/1:2,11:13:30.09:370,30,0	1/1:0,7:7:15.05:186,15,0	1/1:4,31:36:47.56:552,48,0	0/0:21,0:21:45.14:0,45,713	0/0:38,0:38:99:0,105,1612	0/0:11,0:11:27.09:0,27,441	0/1:11,1:12:4.26:4,0,393
chr10	51356332	.	C	CGT	9942.59	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=10.331;DP=914;FS=19.049;HRun=0;HaplotypeScore=203.7334;InbreedingCoeff=0.9984;MQ=55.75;MQ0=14;MQRankSum=-2.309;QD=29.68;ReadPosRankSum=-1.914;VQSLOD=3.5772;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,18:28:43.77:600,44,0	1/1:4,8:12:21.07:330,21,0	0/0:54,0:23:24.93:0,25,425	0/0:60,0:28:44.75:0,45,460	0/0:23,0:23:57.19:0,57,749	1/1:8,12:20:38.58:524,39,0	1/1:17,28:45:99:1547,102,0	0/0:34,0:34:87.21:0,87,1090	0/0:28,0:28:66.18:0,66,837	0/0:33,0:33:75.24:0,75,977	0/0:22,0:22:60.17:0,60,763	1/1:11,21:32:69.09:1081,69,0	1/1:11,21:31:55.53:1188,56,0	0/0:36,0:36:92.88:0,93,1143	1/1:18,18:36:65.93:1000,66,0	1/1:9,30:39:99:1591,99,0	0/0:41,0:41:99:0,114,1441	1/1:11,10:20:31.88:610,32,0	0/0:25,0:22:51.14:0,51,651	0/0:17,0:17:42.14:0,42,554	0/0:105,0:103:99:0,239,2999	1/1:8,5:14:26.67:389,27,0	1/1:5,6:11:21.01:327,21,0	1/1:25,20:45:51.10:756,51,0	0/0:23,0:22:51.12:0,51,657	0/0:49,0:49:99:0,120,1583	0/0:18,0:18:48.06:0,48,583	0/0:11,0:11:33.11:0,33,436
chr10	51356367	.	A	AGT	8372.36	PASS	AB=0.699;AC=22;AF=0.393;AN=56;BaseQRankSum=0.768;DP=883;FS=14.964;HRun=0;HaplotypeScore=172.1627;InbreedingCoeff=0.7803;MQ=52.89;MQ0=15;MQRankSum=0.736;QD=22.33;ReadPosRankSum=-2.423;VQSLOD=4.1542;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:12,22:36:56.44:860,56,0	1/1:2,8:10:21.07:340,21,0	0/0:43,0:14:24.05:0,24,280	0/0:49,0:22:12.39:0,12,217	0/0:27,0:29:77.89:0,78,895	1/1:10,15:25:51.12:774,51,0	0/1:18,32:50:1.91:1406,0,2	0/0:37,0:37:75.20:0,75,882	0/0:27,0:30:61.46:0,61,716	0/0:31,0:31:78.24:0,78,944	0/0:17,0:18:34.02:0,34,580	1/1:13,11:25:17.57:500,18,0	1/1:12,19:30:51.15:788,51,0	0/0:34,0:35:96.10:0,96,1125	0/1:9,19:28:0.75:499,0,1	1/1:15,26:41:35.58:1082,36,0	0/0:40,0:40:84.08:0,84,1010	1/1:9,15:24:32.32:494,32,0	0/1:24,1:24:3.89:4,0,423	0/0:24,0:24:63.20:0,63,770	0/0:81,0:81:99:0,128,2032	1/1:5,11:16:36.10:536,36,0	0/1:4,6:10:18.13:201,0,18	1/1:23,29:50:29.03:888,29,0	0/0:21,0:20:38.91:0,39,476	0/0:40,0:39:99:0,99,1201	0/0:19,0:19:54.16:0,54,648	0/0:10,0:10:15.05:0,15,183
chr10	51362341	.	G	GCACACACA	8175.26	PASS	AB=0.576;AC=23;AF=0.411;AN=56;BaseQRankSum=0.147;DP=780;FS=6.488;HRun=0;HaplotypeScore=211.3213;InbreedingCoeff=0.8442;MQ=57.16;MQ0=4;MQRankSum=-11.669;QD=25.95;ReadPosRankSum=-0.826;VQSLOD=3.7193;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:39:8.32:271,8,0	1/1:3,4:8:5.95:189,6,0	0/0:35,0:18:5.54:0,6,127	0/0:30,0:13:3.01:0,3,76	0/0:28,0:30:57.19:0,57,1413	1/1:8,17:27:24.08:870,24,0	1/1:8,16:27:2.35:550,2,0	0/0:26,0:30:57.18:0,57,1284	0/0:33,0:35:78.22:0,78,1863	0/0:19,0:20:45.15:0,45,1133	0/0:10,0:11:33.11:0,33,763	1/1:13,18:34:39.13:1509,39,0	1/1:13,15:31:36.12:1215,36,0	0/0:33,0:35:93.32:0,93,2296	1/1:17,19:37:32.73:1244,33,0	1/1:6,10:18:15.05:557,15,0	0/0:30,0:34:49.67:0,50,1578	1/1:15,0:15:26.88:384,27,0	0/0:15,0:17:29.59:0,30,626	0/0:25,0:27:59.96:0,60,1243	0/0:56,0:69:99:0,123,3172	1/1:8,11:22:5.36:647,5,0	0/1:5,11:18:0.24:342,0,0	1/1:16,17:38:11.42:398,11,0	0/0:15,0:17:36.12:0,36,882	0/0:26,0:31:17.60:0,18,1193	0/0:21,0:23:45.15:0,45,1113	0/0:17,0:19:57.19:0,57,1382
chr10	51362680	.	CCCT	C	2226.31	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=2.025;DP=421;FS=1.128;HRun=0;HaplotypeScore=61.8060;InbreedingCoeff=0.8383;MQ=63.40;MQ0=3;MQRankSum=1.182;QD=17.26;ReadPosRankSum=5.318;VQSLOD=3.2379;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:9.95:0,10,103	1/1:3,0:3:5.98:51,6,0	0/0:25,0:16:38.04:0,38,501	0/0:21,0:11:32.81:0,33,448	0/0:18,0:18:32.60:0,33,436	0/0:25,0:24:47.53:0,48,208	0/0:14,0:14:24.64:0,25,120	0/0:25,0:25:38.76:0,39,478	0/0:14,0:14:28.27:0,28,377	0/0:15,0:15:24.04:0,24,325	0/0:6,0:6:6.02:0,6,106	1/1:0,9:9:12.04:183,12,0	1/1:4,16:20:18.04:274,18,0	0/0:10,0:10:18.01:0,18,202	1/1:2,20:22:30.08:418,30,0	1/1:1,14:15:32.25:501,32,0	0/0:7,0:7:18.04:0,18,346	1/1:2,12:14:13.69:284,14,0	0/0:13,0:13:4.18:0,4,445	0/0:18,0:18:23.93:0,24,280	0/0:14,0:14:18.19:0,18,204	1/1:1,8:9:9.02:137,9,0	1/1:10,5:14:27.45:302,27,0	1/1:1,12:13:18.05:274,18,0	0/0:7,0:7:6.02:0,6,96	0/1:9,0:9:4.95:5,0,133	0/0:31,0:31:26.57:0,27,797	0/0:12,0:12:26.43:0,26,419
chr10	51362682	.	CT	C	672.19	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=7.489;DP=412;FS=2.662;HRun=1;HaplotypeScore=56.1355;InbreedingCoeff=0.8237;MQ=63.82;MQ0=3;MQRankSum=-0.283;QD=5.09;ReadPosRankSum=4.940;VQSLOD=0.8352;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:16.25:0,16,195	1/1:3,0:3:6:51,6,0	0/0:25,0:16:34.28:0,34,314	0/0:22,0:11:32.97:0,33,366	0/0:17,0:17:26.93:0,27,279	0/0:25,0:24:52.40:0,52,308	0/0:14,0:14:25.90:0,26,162	0/0:18,4:22:14.91:0,15,365	0/0:12,0:12:22.21:0,22,217	0/0:17,0:17:25.60:0,26,267	0/0:6,0:6:8.98:0,9,88	1/1:9,0:9:11.50:61,12,0	1/1:17,1:18:17.25:92,17,0	0/0:14,0:14:29.96:0,30,260	1/1:22,0:22:28.75:151,29,0	1/1:14,1:15:32.10:168,32,0	0/0:6,0:6:14.87:0,15,197	1/1:13,0:13:7.84:96,8,0	0/0:14,0:14:6.36:0,6,292	0/1:16,0:16:4.60:5,0,134	0/0:7,0:7:4.36:0,4,115	1/1:8,0:8:8.63:46,9,0	1/1:16,0:15:20.24:113,20,0	1/1:12,0:12:17.25:91,17,0	0/0:7,0:7:5.99:0,6,63	0/0:9,0:9:16.37:0,16,141	0/0:33,0:33:51.84:0,52,540	0/0:10,0:10:23.38:0,23,254
chr10	51365163	.	A	ATGTGTGTGTGTG	3680.39	PASS	AB=0.969;AC=20;AF=0.370;AN=54;BaseQRankSum=3.730;DP=819;FS=0.458;HRun=0;HaplotypeScore=275.0474;InbreedingCoeff=0.7930;MQ=54.60;MQ0=18;MQRankSum=-4.889;QD=12.73;ReadPosRankSum=-3.723;VQSLOD=1.6370;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:23:8.61:102,9,0	./.	0/1:25,0:12:12.06:12,0,13	0/0:41,0:17:2.49:0,2,9	0/0:27,0:27:36.09:0,36,861	1/1:22,1:21:12.15:184,12,0	1/1:33,0:26:24.04:381,24,0	0/0:46,0:52:21.92:0,22,596	0/0:18,0:21:38.40:0,38,955	0/0:27,0:30:46.94:0,47,1163	0/0:16,0:15:13.44:0,13,578	1/1:36,0:34:40.97:776,41,0	1/1:22,0:19:26.12:612,26,0	0/0:35,0:39:59.31:0,59,1846	0/0:11,14:25:0.90:0,1,2	1/1:6,13:20:12.04:645,12,0	0/0:25,0:25:42.11:0,42,1011	1/1:23,1:23:33.01:614,33,0	0/0:26,0:23:12.46:0,12,332	0/0:22,0:21:31.77:0,32,744	0/0:89,0:89:84.02:0,84,3890	1/1:27,0:25:5.83:48,6,0	0/1:14,1:14:0:0,0,0	1/1:35,0:34:20.31:306,20,0	0/0:22,0:24:39.12:0,39,996	0/0:38,0:39:66.94:0,67,1536	0/0:14,0:14:6.13:0,6,778	0/0:24,0:27:45.88:0,46,1705
chr10	51365272	.	CTG	C	1969.67	PASS	AB=0.875;AC=10;AF=0.179;AN=56;BaseQRankSum=3.294;DP=877;FS=8.390;HRun=0;HaplotypeScore=151.2807;InbreedingCoeff=0.3184;MQ=59.48;MQ0=14;MQRankSum=2.250;QD=5.97;ReadPosRankSum=-0.634;VQSLOD=2.6394;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,15:28:45:546,45,0	0/0:11,0:11:21.07:0,21,333	0/0:51,0:10:9.63:0,10,41	0/0:47,0:17:20.01:0,20,209	0/0:8,0:8:10.26:0,10,124	0/1:4,15:19:3.27:464,0,3	1/1:12,36:50:86.93:1011,87,0	0/1:35,2:35:7.28:7,0,788	0/0:28,0:28:48.16:0,48,765	0/1:30,2:30:18.62:19,0,535	0/0:14,0:14:30.07:0,30,457	0/0:55,0:54:99:0,112,1734	0/0:25,0:24:52.37:0,52,744	0/0:30,0:30:69.18:0,69,1018	0/0:29,1:30:20.82:0,21,807	0/1:20,2:22:27.66:28,0,570	0/0:34,1:35:30.54:0,31,1053	0/0:30,0:30:63.20:0,63,992	0/0:15,0:12:18.04:0,18,276	0/0:17,0:16:27.08:0,27,410	0/1:120,7:123:37.54:38,0,3298	0/0:21,1:22:51.16:0,51,798	0/0:14,0:13:20.86:0,21,297	0/0:63,1:63:15.83:0,16,1202	0/1:14,1:15:12.28:12,0,315	0/0:33,0:32:36.47:0,36,872	0/0:13,0:13:21.07:0,21,339	0/0:4,0:4:12.04:0,12,194
chr10	51365513	.	A	AGT	4582.93	PASS	AB=0.821;AC=18;AF=0.321;AN=56;BaseQRankSum=2.805;DP=1001;FS=3.290;HRun=0;HaplotypeScore=208.9674;InbreedingCoeff=0.2984;MQ=50.09;MQ0=30;MQRankSum=0.100;QD=12.25;ReadPosRankSum=-0.177;VQSLOD=4.4816;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:24,1:37:44.48:394,44,0	1/1:6,5:11:12.03:186,12,0	0/0:72,0:15:5.88:0,6,52	0/0:81,0:19:0.66:0,1,49	0/0:19,0:19:30.56:0,31,353	1/1:14,2:20:20.46:207,20,0	1/1:29,2:45:56.99:655,57,0	0/0:30,0:29:38.26:0,38,333	0/0:38,0:40:59.20:0,59,668	0/0:50,0:47:99:0,102,1122	0/0:15,0:16:6.26:0,6,295	0/1:34,8:42:66.20:421,0,66	0/1:20,8:26:24.75:515,0,25	0/0:40,0:41:67.08:0,67,669	0/1:21,12:33:17.21:546,0,17	0/1:14,9:21:39.28:306,0,39	0/0:27,0:28:60.29:0,60,645	1/1:21,8:28:1.47:457,1,0	0/1:14,0:8:19.59:20,0,85	0/0:23,0:23:38.87:0,39,422	0/0:134,0:133:99:0,206,2223	0/1:17,7:23:11.90:255,0,12	0/1:11,1:11:0.08:0,0,0	0/1:39,13:51:17.46:621,0,17	0/0:26,0:27:50.98:0,51,571	0/0:36,0:35:55.71:0,56,616	0/0:12,0:12:21.53:0,22,244	0/0:8,0:8:7.88:0,8,101
chr10	51365541	.	G	GGT	4529.46	PASS	AB=0.786;AC=16;AF=0.286;AN=56;BaseQRankSum=3.153;DP=1015;FS=15.297;HRun=0;HaplotypeScore=207.7104;InbreedingCoeff=0.4713;MQ=50.44;MQ0=41;MQRankSum=0.421;QD=12.24;ReadPosRankSum=-4.411;VQSLOD=2.1944;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:38:70.09:0,70,818	1/1:5,2:7:6.01:94,6,0	0/1:99,0:14:4.80:5,0,35	0/0:98,0:15:9.74:0,10,80	0/0:18,0:19:29.86:0,30,322	0/0:18,0:18:32.98:0,33,380	0/0:45,0:45:65.99:0,66,826	0/0:26,0:27:35.91:0,36,377	0/0:34,0:35:68.85:0,69,751	0/0:45,0:43:59.84:0,60,660	0/0:10,0:12:23.11:0,23,234	0/1:16,27:45:21.34:989,0,21	0/1:17,12:30:11.06:634,0,11	0/0:32,0:34:72.03:0,72,818	0/1:21,12:33:36.71:534,0,37	1/1:6,17:23:33.89:687,34,0	0/0:27,0:29:56.59:0,57,585	1/1:11,10:21:42.01:561,42,0	0/0:18,0:10:18.05:0,18,210	0/0:26,0:25:36.10:0,36,426	0/0:131,0:133:99:0,207,2369	1/1:9,14:25:21.07:333,21,0	1/1:6,6:13:10.68:165,11,0	0/1:27,16:45:81.91:519,0,82	0/1:26,0:27:7.34:7,0,320	0/0:33,0:35:71.82:0,72,781	0/0:14,0:14:27.06:0,27,308	0/0:10,0:11:21.78:0,22,322
chr10	51365643	.	C	CTG	7648.68	PASS	AB=0.707;AC=23;AF=0.411;AN=56;BaseQRankSum=5.164;DP=791;FS=13.271;HRun=0;HaplotypeScore=141.6999;InbreedingCoeff=0.7441;MQ=55.59;MQ0=23;MQRankSum=1.852;QD=25.00;ReadPosRankSum=2.788;VQSLOD=5.5915;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:13,15:25:44.38:696,44,0	1/1:3,4:7:12.04:194,12,0	0/0:34,0:13:9.74:0,10,59	0/0:30,0:8:5.92:0,6,42	0/0:11,0:11:24.04:0,24,259	1/1:8,12:20:39.98:605,40,0	0/1:18,25:42:48.66:757,0,49	0/0:21,0:20:23.81:0,24,268	0/0:31,0:31:66.03:0,66,767	0/0:36,0:36:65.76:0,66,737	0/0:16,0:16:24.07:0,24,292	1/1:5,26:29:23.54:888,24,0	1/1:13,11:24:42.11:637,42,0	0/0:38,0:37:96.30:0,96,1163	1/1:5,15:22:39.60:628,40,0	1/1:4,18:23:36.12:584,36,0	0/0:16,1:16:26.61:0,27,325	1/1:9,16:23:40:718,40,0	0/0:18,0:12:18.06:0,18,220	0/0:13,0:13:23.54:0,24,252	0/0:151,1:148:99:0,278,3266	0/1:5,10:15:15.56:271,0,16	1/1:3,9:12:24.08:389,24,0	1/1:16,32:44:81.12:1251,81,0	0/0:14,0:14:30.08:0,30,349	0/0:40,0:40:43.98:0,44,667	0/1:7,1:8:30.49:30,0,165	0/0:10,0:10:8.99:0,9,93
chr10	51365754	.	C	CTG	1691.44	PASS	AB=0.653;AC=3;AF=0.054;AN=56;BaseQRankSum=-3.615;DP=905;FS=3.362;HRun=0;HaplotypeScore=136.6759;InbreedingCoeff=-0.0692;MQ=53.14;MQ0=39;MQRankSum=1.002;QD=16.11;ReadPosRankSum=-1.402;VQSLOD=3.4410;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:16,11:26:32.89:461,0,33	0/0:9,0:8:11.96:0,12,142	0/0:47,0:10:19.94:0,20,176	0/0:46,0:3:3.01:0,3,35	0/0:12,0:12:17.33:0,17,167	0/1:9,19:27:99:396,0,104	0/1:24,25:48:99:934,0,291	0/0:31,0:27:39.11:0,39,461	0/0:32,0:33:61.06:0,61,710	0/0:34,0:32:35.18:0,35,421	0/0:19,0:16:30.45:0,30,332	0/0:47,0:47:99:0,101,1153	0/0:27,0:26:62.79:0,63,695	0/0:42,0:40:72.15:0,72,849	0/0:33,0:33:81.24:0,81,962	0/0:24,0:22:56.99:0,57,665	0/0:35,0:34:84.21:0,84,986	0/0:28,0:28:67.25:0,67,873	0/0:14,0:11:21.03:0,21,238	0/0:19,0:18:39.10:0,39,450	0/0:130,0:126:99:0,198,2549	0/0:25,0:26:40.05:0,40,576	0/0:10,0:11:22.93:0,23,231	0/0:53,0:49:99:0,116,1373	0/0:22,0:22:45.11:0,45,539	0/0:33,0:32:59.26:0,59,612	0/0:17,0:17:29.27:0,29,292	0/0:2,0:3:5.85:0,6,50
chr10	51366431	.	A	ATTTTTT	8112.37	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=3.566;DP=533;FS=1.355;HRun=9;HaplotypeScore=116.0868;InbreedingCoeff=0.9891;MQ=68.96;MQ0=0;MQRankSum=-13.933;QD=36.22;ReadPosRankSum=-6.555;VQSLOD=1.3250;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:12,11:27:49.01:1272,49,0	1/1:6,5:11:18.06:483,18,0	0/0:10,0:10:23.65:0,24,309	0/0:10,0:10:17.98:0,18,285	0/0:17,0:17:39.02:0,39,723	1/1:9,1:18:24.08:550,24,0	1/1:7,2:23:48.16:1075,48,0	0/0:36,0:36:85.01:0,85,1461	0/0:25,0:25:72.25:0,72,1317	0/0:25,0:27:68.97:0,69,1206	0/0:10,0:10:27.08:0,27,469	1/1:9,9:20:27.09:754,27,0	1/1:10,3:16:18.06:485,18,0	0/0:18,0:18:54.19:0,54,995	1/1:17,1:21:35.15:904,35,0	1/1:16,5:22:21.07:591,21,0	0/0:17,0:17:51.14:0,51,889	1/1:3,7:12:15.05:412,15,0	0/0:20,0:21:41.84:0,42,894	0/0:23,0:24:66.14:0,66,1130	0/0:20,0:20:51.13:0,51,946	1/1:9,0:11:20.10:478,20,0	1/1:10,5:17:19.88:498,20,0	1/1:11,9:22:27.09:609,27,0	0/0:16,0:16:35.97:0,36,661	0/0:29,0:29:72.09:0,72,1315	0/0:22,0:22:57.09:0,57,1047	0/0:5,0:5:15.05:0,15,278
chr10	51369309	.	AGT	A	8683.97	PASS	AB=0.955;AC=25;AF=0.446;AN=56;BaseQRankSum=13.239;DP=645;FS=0.317;HRun=0;HaplotypeScore=88.1142;InbreedingCoeff=0.9432;MQ=80.18;MQ0=1;MQRankSum=-2.207;QD=29.54;ReadPosRankSum=3.583;VQSLOD=6.2540;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,31:35:84.27:1092,84,0	1/1:1,12:13:36.07:449,36,0	0/1:19,1:21:5.48:5,0,677	0/0:29,0:27:27.82:0,28,720	0/0:23,0:23:60.21:0,60,1016	1/1:2,18:19:48.16:624,48,0	1/1:3,16:19:48.16:624,48,0	0/0:26,0:26:69.21:0,69,1124	0/0:16,0:16:45.15:0,45,764	0/0:29,0:29:81.27:0,81,1355	0/0:17,0:17:45.14:0,45,739	1/1:4,19:23:57.18:738,57,0	1/1:3,20:23:60.20:780,60,0	0/0:18,0:18:45.15:0,45,756	1/1:3,22:25:63.20:819,63,0	1/1:2,18:20:48.16:624,48,0	0/0:24,0:24:60.21:0,60,1021	1/1:4,19:23:54.17:702,54,0	0/0:26,0:26:60.19:0,60,994	0/0:18,0:18:51.17:0,51,854	0/0:28,0:28:72.24:0,72,1206	1/1:6,19:25:51.17:663,51,0	1/1:2,21:23:63.20:819,63,0	1/1:2,22:24:57.19:741,57,0	0/0:23,0:23:63.18:0,63,1017	0/0:31,0:31:78.27:0,78,1327	0/0:22,0:22:54.16:0,54,884	0/0:20,1:21:24.19:0,24,981
chr10	51369402	.	CAGAGAG	C	2632.66	PASS	AB=0.988;AC=20;AF=0.385;AN=52;BaseQRankSum=2.099;DP=601;FS=74.082;HRun=0;HaplotypeScore=139.5448;InbreedingCoeff=0.4978;MQ=46.11;MQ0=33;MQRankSum=2.581;QD=8.63;ReadPosRankSum=-3.000;VQSLOD=-0.7575;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:39,0:43:13.44:497,13,0	1/1:7,0:7:5.91:117,6,0	./.	./.	0/0:23,0:23:9.03:0,9,187	1/1:13,0:11:5.77:76,6,0	1/1:32,0:27:5.21:99,5,0	0/0:22,0:21:9.03:0,9,172	0/0:26,0:24:9.89:0,10,460	0/0:29,0:28:44.84:0,45,700	0/0:14,0:14:5.99:0,6,188	1/1:22,2:26:15.26:283,15,0	1/1:18,4:22:15.05:287,15,0	0/0:26,0:25:36.57:0,37,804	0/1:26,0:23:15.42:251,0,15	1/1:25,0:26:13.01:235,13,0	0/0:16,0:22:13.60:0,14,281	0/1:18,0:18:68.48:248,0,68	0/0:11,0:11:6.02:0,6,111	0/1:15,0:14:50.70:51,0,90	0/1:35,0:29:31.64:32,0,197	0/0:13,7:20:0:0,0,0	0/0:11,6:16:0:0,0,0	1/1:36,0:37:33.11:634,33,0	0/0:14,0:14:9.02:0,9,158	0/0:32,0:31:53.99:0,54,937	0/0:26,0:26:21.54:0,22,456	0/0:7,0:5:12.04:0,12,255
chr10	51369930	.	AT	A	5964.02	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=13.263;DP=655;FS=10.023;HRun=10;HaplotypeScore=69.6315;InbreedingCoeff=0.9758;MQ=71.80;MQ0=0;MQRankSum=-0.569;QD=20.85;ReadPosRankSum=2.931;VQSLOD=5.5683;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,56:59:99:1302,150,0	1/1:3,13:16:32.97:286,33,0	0/0:14,0:14:20.96:0,21,197	0/0:12,0:12:18.31:0,18,153	0/0:25,0:25:72.18:0,72,782	1/1:1,17:18:47.99:417,48,0	1/1:3,12:15:35.99:313,36,0	0/0:35,0:35:81.21:0,81,889	0/0:14,1:15:4.04:0,4,265	0/0:29,0:29:78.15:0,78,837	0/0:16,0:16:33.08:0,33,358	1/1:3,13:16:32.82:286,33,0	1/1:3,15:18:15.95:313,16,0	0/0:28,0:28:75.20:0,75,830	1/1:3,26:29:65.97:573,66,0	1/1:2,27:29:74.98:651,75,0	0/0:30,1:31:64.14:0,64,915	1/1:3,18:21:47.97:417,48,0	0/0:21,1:22:31.08:0,31,556	0/0:26,0:28:77.99:0,78,823	0/0:20,0:20:39.09:0,39,422	1/1:4,24:28:59.97:521,60,0	1/1:0,14:14:35.99:313,36,0	1/1:0,23:23:65.99:573,66,0	0/0:21,0:21:48.12:0,48,522	0/0:26,0:27:72.02:0,72,771	0/0:29,0:29:75.19:0,75,815	0/0:17,0:17:51.12:0,51,555
chr10	51370544	.	CGTGTGTGTGT	C	2399.58	PASS	AB=0.674;AC=15;AF=0.278;AN=54;BaseQRankSum=6.618;DP=625;FS=0.000;HRun=0;HaplotypeScore=173.2308;InbreedingCoeff=0.7308;MQ=65.62;MQ0=2;MQRankSum=-6.663;QD=14.12;ReadPosRankSum=0.911;VQSLOD=2.6817;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:41:23.93:0,24,592	1/1:8,2:10:6.02:178,6,0	./.	0/0:29,0:20:3.01:0,3,71	0/0:16,0:19:30.09:0,30,1131	0/0:19,0:19:3:0,3,25	0/0:29,0:27:18.49:0,18,835	0/0:29,0:29:19.61:0,20,515	0/0:16,0:18:21.07:0,21,882	0/0:22,0:22:33.02:0,33,1062	0/0:9,0:11:15.03:0,15,399	1/1:12,6:18:9.92:269,10,0	1/1:13,7:20:6.02:178,6,0	0/0:23,0:23:33.05:0,33,1328	1/1:15,9:25:14.92:425,15,0	1/1:8,10:18:18.06:534,18,0	0/0:21,0:24:36.12:0,36,1584	0/0:17,0:16:3.01:0,3,40	0/0:20,0:19:7.20:0,7,151	0/0:6,0:11:6.02:0,6,175	0/0:38,0:49:21.07:0,21,838	1/1:13,9:22:12.51:286,13,0	1/1:14,12:26:25.44:562,25,0	0/1:16,14:31:15.72:149,0,16	0/0:19,0:19:27.07:0,27,1009	0/0:26,0:26:30.56:0,31,1017	0/0:14,0:15:27.19:0,27,912	0/0:9,0:11:21.07:0,21,920
chr10	51370754	.	CCTGTTCTCT	C	9848.12	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=13.742;DP=568;FS=16.204;HRun=0;HaplotypeScore=182.2351;InbreedingCoeff=0.9991;MQ=87.90;MQ0=0;MQRankSum=-15.260;QD=75.75;ReadPosRankSum=1.709;VQSLOD=4.0769;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,102,4771	1/1:0,9:9:27.09:800,27,0	0/0:25,0:25:69.24:0,69,2968	0/0:21,0:21:57.18:0,57,2262	0/0:22,0:22:60.21:0,60,2768	0/0:18,0:18:48.16:0,48,2255	0/0:22,0:22:66.23:0,66,3172	0/0:21,0:21:60.19:0,60,2611	0/0:29,0:29:87.30:0,87,4072	0/0:26,0:26:78.24:0,78,3347	0/0:14,0:14:36.12:0,36,1680	1/1:3,13:16:45.15:1345,45,0	1/1:3,16:19:51.16:1512,51,0	0/0:27,0:27:81.28:0,81,3480	1/1:0,12:12:36.12:1116,36,0	1/1:5,12:17:42.14:1233,42,0	0/0:30,0:30:90.31:0,90,4327	1/1:3,10:13:36.12:1033,36,0	0/0:20,0:20:57.19:0,57,2557	0/0:17,0:17:51.17:0,51,2309	0/0:33,0:32:96.31:0,96,4477	1/1:1,15:16:42.06:1153,42,0	1/1:0,15:15:39:952,39,0	1/1:3,10:13:24.08:704,24,0	0/0:20,0:20:60.21:0,60,2530	0/0:18,0:18:48.16:0,48,2197	0/0:26,0:25:78.27:0,78,3689	0/0:8,0:8:24.08:0,24,1174
chr10	51370775	.	A	AC	6847.89	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=2.989;DP=554;FS=0.724;HRun=6;HaplotypeScore=106.7421;InbreedingCoeff=0.9947;MQ=79.54;MQ0=0;MQRankSum=-8.846;QD=28.18;ReadPosRankSum=1.300;VQSLOD=4.5962;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,34:37:90.29:1132,90,0	1/1:3,11:14:27.09:339,27,0	0/0:13,0:14:32.61:0,33,322	0/0:19,0:19:45.50:0,45,421	0/0:18,0:18:54.10:0,54,538	1/1:3,17:20:45.14:565,45,0	1/1:1,26:27:69.22:868,69,0	0/0:16,0:16:33.06:0,33,331	0/0:26,0:26:72.16:0,72,730	0/0:21,0:21:48.11:0,48,490	0/0:12,0:11:27.05:0,27,275	1/1:5,13:18:39.12:490,39,0	1/1:3,15:18:45.13:564,45,0	0/0:26,0:26:69.14:0,69,703	1/1:3,13:16:42.13:528,42,0	1/1:1,17:18:45.08:548,45,0	0/0:30,0:30:78.16:0,78,789	1/1:3,16:19:54.13:650,54,0	0/0:22,0:22:57.12:0,57,581	0/0:13,0:13:30.07:0,30,306	0/0:29,0:29:78.17:0,78,796	1/1:5,13:18:39.12:488,39,0	1/1:5,15:20:30.10:374,30,0	1/1:4,14:18:23.69:301,24,0	0/0:14,0:14:42.10:0,42,428	0/0:14,0:14:27.06:0,27,275	0/0:29,0:28:78.14:0,78,781	0/0:8,0:8:11.98:0,12,112
chr10	51371007	.	TAACTC	T	3471.09	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=11.459;DP=562;FS=1.627;HRun=0;HaplotypeScore=125.6064;InbreedingCoeff=0.9877;MQ=86.93;MQ0=0;MQRankSum=-12.041;QD=43.94;ReadPosRankSum=0.215;VQSLOD=3.9319;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,30:30:84.20:1554,84,0	0/0:5,0:5:11.93:0,12,301	0/0:22,0:22:63.15:0,63,1722	0/0:20,0:21:43.30:0,43,1145	0/0:16,0:16:45.15:0,45,1426	1/1:0,19:19:48.12:965,48,0	1/1:5,25:30:51.17:953,51,0	0/0:33,0:33:96.33:0,96,2873	0/0:36,0:36:99:0,108,3317	0/0:21,0:21:60.18:0,60,1831	0/0:8,0:8:24.08:0,24,760	0/0:23,0:23:69.22:0,69,2048	0/0:22,0:22:63.18:0,63,1776	0/0:21,0:21:63.22:0,63,1992	0/0:22,0:22:63.20:0,63,1868	0/0:27,0:27:75.24:0,75,2253	0/0:22,0:22:66.23:0,66,2035	0/0:19,0:19:57.15:0,57,1676	0/0:12,0:12:36.11:0,36,1068	0/0:16,0:16:48.16:0,48,1496	0/0:22,0:22:60.21:0,60,1903	0/0:13,0:13:36.12:0,36,1051	0/0:10,0:10:30.10:0,30,941	0/0:29,0:29:84.27:0,84,2562	0/0:11,0:11:33.11:0,33,989	0/0:17,0:17:51.17:0,51,1509	0/0:22,0:22:63.20:0,63,1879	0/0:13,0:13:39.13:0,39,1053
chr10	51372959	.	G	GC	4461.76	PASS	AB=1.000;AC=49;AF=0.942;AN=52;BaseQRankSum=3.740;DP=139;FS=8.074;HRun=0;HaplotypeScore=120.6859;InbreedingCoeff=0.3578;MQ=73.08;MQ0=0;MQRankSum=-3.726;QD=35.13;ReadPosRankSum=3.659;VQSLOD=3.8289;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,6:6:15.05:206,15,0	1/1:0,2:2:6.02:85,6,0	0/0:12,0:5:6.01:0,6,67	0/1:12,0:6:3.09:3,0,81	1/1:0,9:9:21.07:282,21,0	1/1:0,2:2:6.02:83,6,0	./.	./.	1/1:0,8:8:24.08:332,24,0	1/1:0,2:2:6.02:81,6,0	1/1:0,6:6:18.06:246,18,0	1/1:0,9:9:27.09:387,27,0	1/1:0,6:6:18.06:239,18,0	1/1:0,12:12:36.10:467,36,0	1/1:0,7:7:21.07:287,21,0	1/1:0,5:5:15.05:200,15,0	1/1:0,3:3:9.03:121,9,0	1/1:0,7:7:15.05:204,15,0	1/1:0,1:1:3.01:44,3,0	1/1:0,3:3:9.03:121,9,0	1/1:0,3:3:9.03:122,9,0	1/1:0,4:4:12.04:163,12,0	1/1:0,4:4:12.04:171,12,0	1/1:0,3:3:9.03:123,9,0	1/1:0,4:5:12.04:167,12,0	1/1:0,0:1:3.01:44,3,0	1/1:0,4:4:12.04:159,12,0	1/1:0,3:3:9.03:125,9,0
chr10	51373000	.	T	TC	374.38	PASS	AB=0.763;AC=17;AF=0.354;AN=48;BaseQRankSum=3.880;DP=135;FS=1.982;HRun=0;HaplotypeScore=94.8115;InbreedingCoeff=0.4667;MQ=88.71;MQ0=0;MQRankSum=-1.254;QD=7.97;ReadPosRankSum=1.644;VQSLOD=3.7516;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:2,4:6:10.88:114,0,11	./.	0/0:11,0:9:14.17:0,14,106	0/0:18,0:9:9.39:0,9,73	0/1:7,1:8:9.04:9,0,20	1/1:1,6:7:7.05:170,7,0	0/0:5,0:5:14.20:0,14,69	0/0:5,0:4:9.98:0,10,39	0/0:4,0:4:11.40:0,11,56	0/0:4,0:4:11.29:0,11,62	0/0:5,0:5:14.26:0,14,71	1/1:0,0:3:7.95:32,8,0	./.	0/0:4,0:4:11.43:0,11,57	1/1:0,0:2:4.90:18,5,0	1/1:0,0:3:0.82:16,1,0	0/0:9,0:9:22.80:0,23,114	1/1:0,0:5:2.96:24,3,0	0/1:3,1:4:23.12:23,0,23	0/0:1,0:1:2.84:0,3,14	0/0:5,0:5:1.12:0,1,20	1/1:0,1:4:10.80:64,11,0	1/1:0,1:5:8.64:61,9,0	./.	0/0:3,0:3:8.31:0,8,38	0/0:3,0:4:8.53:0,9,47	0/0:8,0:8:22.63:0,23,116	./.
chr10	51373424	.	G	GT	2788.32	PASS	AB=1.000;AC=24;AF=0.429;AN=56;BaseQRankSum=12.133;DP=501;FS=6.685;HRun=10;HaplotypeScore=101.6307;InbreedingCoeff=0.8655;MQ=55.88;MQ0=4;MQRankSum=-9.892;QD=13.60;ReadPosRankSum=-0.991;VQSLOD=3.2282;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:19,1:19:31.19:316,31,0	1/1:10,0:10:22.50:189,23,0	0/0:23,0:14:17.31:0,17,122	0/1:25,0:11:0.05:0,0,101	0/0:21,1:22:18.58:0,19,353	1/1:16,0:17:42.06:423,42,0	1/1:17,0:16:15.54:241,16,0	0/0:22,0:22:39.81:0,40,322	0/0:15,0:15:26.91:0,27,216	0/0:16,0:16:38.93:0,39,319	0/0:24,0:24:65.88:0,66,537	1/1:21,0:21:18.92:350,19,0	1/1:14,0:14:23.14:285,23,0	0/0:18,0:18:47.88:0,48,382	1/1:8,0:8:12.46:108,12,0	1/1:12,0:12:29.24:270,29,0	0/0:34,1:34:48.35:0,48,604	1/1:17,1:14:22.11:251,22,0	0/0:23,0:23:54.38:0,54,443	0/0:14,1:15:13.29:0,13,270	0/0:10,0:10:22.52:0,23,176	1/1:15,0:15:17.06:293,17,0	1/1:13,0:13:9.57:199,10,0	0/1:15,0:13:4.49:80,0,4	0/0:12,1:13:3.95:0,4,235	0/0:20,0:20:41.87:0,42,339	0/0:21,0:22:54.37:0,54,434	0/0:17,0:17:31.90:0,32,311
chr10	51373432	.	T	TTTTG	7588.57	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=12.030;DP=528;FS=7.389;HRun=0;HaplotypeScore=113.9355;InbreedingCoeff=0.9658;MQ=52.26;MQ0=9;MQRankSum=-9.584;QD=41.02;ReadPosRankSum=-0.535;VQSLOD=4.7771;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,12:21:41.73:780,42,0	1/1:7,4:11:30.07:492,30,0	0/0:27,0:12:15.34:0,15,323	0/0:35,0:14:12.75:0,13,270	0/0:22,0:22:40.07:0,40,843	1/1:3,13:16:42.12:917,42,0	1/1:11,5:15:45.01:666,45,0	0/0:21,0:21:54.04:0,54,749	0/0:14,0:14:35.99:0,36,504	0/0:19,0:18:48.09:0,48,734	0/0:25,0:25:75.15:0,75,1165	1/1:14,9:23:61.89:963,62,0	1/1:7,6:14:35.39:645,35,0	0/0:16,0:16:48.16:0,48,790	1/1:5,4:9:18.06:331,18,0	1/1:3,9:12:36.12:709,36,0	0/0:35,0:34:69.99:0,70,1285	1/1:17,5:19:36.04:608,36,0	0/0:26,0:26:69.58:0,70,1045	0/0:16,0:16:19.54:0,20,631	0/0:11,0:11:25.61:0,26,385	1/1:6,8:14:37.92:674,38,0	1/1:8,5:14:9.10:447,9,0	1/1:11,2:12:4.83:356,5,0	0/0:14,0:14:41.85:0,42,614	0/0:23,0:23:59.97:0,60,843	0/0:24,0:24:66.54:0,67,997	0/0:15,0:15:44.50:0,45,695
chr10	51373434	.	TG	T	1752.13	PASS	AB=0.886;AC=19;AF=0.339;AN=56;BaseQRankSum=12.450;DP=533;FS=5.550;HRun=1;HaplotypeScore=102.0982;InbreedingCoeff=0.5274;MQ=51.20;MQ0=10;MQRankSum=-9.284;QD=9.17;ReadPosRankSum=2.117;VQSLOD=1.4135;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,8:21:30.45:201,30,0	0/1:10,2:12:8.73:157,0,9	0/0:26,0:11:10.50:0,11,165	0/0:34,2:14:0.39:0,0,172	0/0:21,0:21:56.60:0,57,587	1/1:17,0:17:43.51:264,44,0	0/1:13,3:15:10.93:166,0,11	0/0:22,0:22:56.02:0,56,604	0/0:13,0:13:36.79:0,37,355	0/0:21,0:20:53.94:0,54,591	0/0:25,0:25:74.29:0,74,822	0/1:22,1:23:33.61:161,0,34	1/1:12,3:15:20.19:212,20,0	0/0:16,0:16:46.89:0,47,491	1/1:7,2:9:1.20:97,1,0	1/1:11,2:13:3.36:157,3,0	0/0:33,0:32:82.73:0,83,1012	0/1:18,4:20:4.35:117,0,4	0/0:26,0:26:47.24:0,47,761	0/0:17,0:17:22.40:0,22,498	0/0:11,0:11:10.95:0,11,282	1/1:14,1:15:9.77:157,10,0	1/1:13,2:15:27.89:208,28,0	0/1:12,1:13:12.42:43,0,12	0/0:15,0:15:44.52:0,45,455	0/0:21,0:21:62.87:0,63,685	0/0:24,0:24:60.88:0,61,682	0/0:15,0:15:45.14:0,45,556
chr10	51373436	.	T	TTG	6490.95	PASS	AB=0.964;AC=22;AF=0.393;AN=56;BaseQRankSum=12.295;DP=531;FS=8.495;HRun=0;HaplotypeScore=93.8654;InbreedingCoeff=0.8448;MQ=49.98;MQ0=11;MQRankSum=-9.993;QD=34.34;ReadPosRankSum=2.027;VQSLOD=7.2312;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:21:40.32:674,40,0	1/1:11,1:12:32.14:428,32,0	0/0:26,0:10:29.09:0,29,341	0/0:36,0:14:32.10:0,32,339	0/0:22,0:22:56.72:0,57,803	1/1:16,1:17:42.05:772,42,0	1/1:14,1:14:41.29:604,41,0	0/0:22,0:22:57.18:0,57,834	0/0:13,0:13:39.12:0,39,565	0/0:21,0:20:60.15:0,60,860	0/0:25,0:25:75.21:0,75,1104	1/1:17,6:23:28.46:920,28,0	1/1:9,3:15:33.56:543,34,0	0/0:16,0:16:48.16:0,48,710	1/1:6,3:10:17.42:265,17,0	1/1:12,1:13:38.93:653,39,0	0/0:31,0:30:82.51:0,83,1201	1/1:19,3:20:35.59:531,36,0	0/0:26,0:26:75.23:0,75,1079	0/0:17,0:17:45.15:0,45,668	0/0:10,0:10:30.09:0,30,425	1/1:13,1:14:11.21:579,11,0	0/1:14,0:14:26.13:296,0,26	0/1:12,1:13:16.66:225,0,17	0/0:17,0:17:45.15:0,45,676	0/0:21,0:21:63.21:0,63,937	0/0:24,0:24:67.77:0,68,983	0/0:15,0:15:45.15:0,45,688
chr10	51373439	.	TG	T	3990.68	PASS	AB=0.804;AC=24;AF=0.429;AN=56;BaseQRankSum=14.373;DP=543;FS=7.425;HRun=1;HaplotypeScore=92.3906;InbreedingCoeff=0.8534;MQ=48.24;MQ0=15;MQRankSum=-9.725;QD=18.14;ReadPosRankSum=2.024;VQSLOD=3.6819;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,12:20:40.96:413,41,0	1/1:4,8:12:31.91:309,32,0	0/1:27,0:10:6.30:6,0,233	0/0:33,1:11:4.78:0,5,147	0/0:22,0:22:59.35:0,59,741	1/1:4,14:18:42.09:454,42,0	1/1:9,7:15:39.08:405,39,0	0/0:26,0:26:69.02:0,69,857	0/0:12,0:12:36.12:0,36,517	0/0:22,0:21:63.19:0,63,873	0/0:25,0:25:75.22:0,75,1024	1/1:8,14:22:32.03:532,32,0	1/1:7,7:14:32.53:303,33,0	0/0:16,0:16:48.01:0,48,598	1/1:7,4:11:16.97:126,17,0	1/1:3,10:13:38.82:380,39,0	0/0:31,0:29:73.54:0,74,1105	1/1:8,14:20:38.76:388,39,0	0/0:26,0:26:72.17:0,72,990	0/0:20,0:20:54.10:0,54,706	0/0:10,0:10:30.09:0,30,415	1/1:3,12:15:15.05:334,15,0	1/1:9,6:15:11.93:215,12,0	0/1:5,9:14:7.19:126,0,7	0/0:17,0:17:51.01:0,51,668	0/0:22,0:22:65.87:0,66,896	0/0:25,0:25:66.65:0,67,905	0/0:15,0:15:45.15:0,45,656
chr10	51374040	.	G	GCTT	18188.97	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-13.457;DP=810;FS=7.271;HRun=0;HaplotypeScore=110.6192;InbreedingCoeff=0.9919;MQ=79.68;MQ0=4;MQRankSum=-5.368;QD=49.16;ReadPosRankSum=1.005;VQSLOD=6.8340;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,50:55:99:2540,135,0	1/1:1,4:5:9.03:197,9,0	0/0:29,0:29:73.75:0,74,1071	0/0:27,0:27:49.70:0,50,714	0/0:21,0:21:63.21:0,63,980	1/1:6,33:38:93.15:1850,93,0	1/1:3,25:28:69.19:1437,69,0	0/0:36,0:36:84.28:0,84,1303	0/0:27,0:27:75.24:0,75,1162	0/0:28,0:28:81.27:0,81,1265	0/0:24,0:24:62.88:0,63,969	1/1:4,22:29:69.24:1502,69,0	1/1:4,28:32:78.27:1672,78,0	0/0:36,0:36:99:0,108,1684	1/1:10,31:41:90.27:1921,90,0	1/1:3,33:38:93.32:2006,93,0	0/0:22,0:22:63.18:0,63,953	1/1:3,12:14:39.10:808,39,0	0/0:29,0:29:66.20:0,66,1009	0/0:27,0:27:81.28:0,81,1283	0/0:48,0:48:99:0,120,1895	1/1:0,34:34:99:2015,99,0	1/1:5,15:19:45.07:864,45,0	1/1:2,30:33:63.22:1378,63,0	0/0:18,0:18:51.17:0,51,809	0/0:31,0:31:75.25:0,75,1169	0/0:20,0:20:54.18:0,54,850	0/0:17,0:17:36.12:0,36,571
chr10	51375967	.	GTAAA	G	786.20	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.252;DP=491;FS=2.073;HRun=0;HaplotypeScore=82.0796;InbreedingCoeff=0.8064;MQ=65.47;MQ0=1;MQRankSum=-1.715;QD=43.68;ReadPosRankSum=1.599;VQSLOD=4.1870;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,16:18:48.16:881,48,0	0/0:8,0:8:24.08:0,24,611	0/0:6,0:4:11.40:0,11,146	0/0:14,0:11:14.98:0,15,224	0/0:22,0:22:45.14:0,45,1124	0/0:18,0:18:48.16:0,48,1265	0/0:9,0:8:21.07:0,21,553	0/0:24,0:24:69.23:0,69,1725	0/0:10,0:10:24.08:0,24,612	0/0:18,0:18:54.19:0,54,1345	0/0:22,0:22:60.20:0,60,1507	0/0:16,0:16:45.15:0,45,1185	0/0:16,0:16:48.16:0,48,1228	0/0:10,0:10:24.08:0,24,632	0/0:11,0:11:27.09:0,27,681	0/0:18,0:18:48.16:0,48,1258	0/0:21,0:21:60.21:0,60,1570	0/0:18,0:18:45.14:0,45,1131	0/0:22,0:22:63.21:0,63,1600	0/0:29,0:29:84.27:0,84,2132	0/0:2,0:2:3.01:0,3,79	0/0:13,0:13:36.12:0,36,927	0/0:23,0:23:63.22:0,63,1639	0/0:11,0:11:30.10:0,30,755	0/0:26,0:26:75.26:0,75,1946	0/0:27,0:27:72.23:0,72,1780	0/0:19,0:19:57.15:0,57,1342	0/0:38,0:38:99:0,114,2985
chr10	51376031	.	AT	A	2347.53	PASS	AB=0.782;AC=24;AF=0.429;AN=56;BaseQRankSum=10.084;DP=484;FS=0.832;HRun=12;HaplotypeScore=55.1540;InbreedingCoeff=0.6784;MQ=73.51;MQ0=0;MQRankSum=0.777;QD=11.51;ReadPosRankSum=0.972;VQSLOD=3.1013;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,19:22:50.79:395,51,0	0/1:2,3:5:21.48:37,0,21	0/1:17,0:15:4.73:5,0,60	0/0:9,0:10:4.85:0,5,59	0/0:24,0:25:53.26:0,53,566	1/1:6,14:21:43.86:331,44,0	1/1:1,13:14:35.86:279,36,0	0/1:29,3:34:3.79:4,0,478	0/0:15,1:16:24.86:0,25,433	0/0:22,0:22:57.10:0,57,573	0/0:21,0:21:51.09:0,51,512	1/1:1,7:8:20.92:162,21,0	1/1:1,9:10:26.89:209,27,0	0/0:12,1:13:15.81:0,16,332	1/1:1,8:9:17.91:139,18,0	1/1:7,8:15:20.86:162,21,0	0/0:28,1:29:51.91:0,52,708	1/1:0,10:10:26.90:209,27,0	0/0:28,1:29:24.86:0,25,429	0/0:13,2:16:0.64:0,1,174	0/0:6,0:6:18.04:0,18,183	1/1:3,7:10:20.91:162,21,0	1/1:4,17:22:41.56:363,42,0	0/1:2,5:7:12.51:98,0,13	0/0:22,0:22:57.10:0,57,573	0/0:23,4:27:5.43:0,5,596	0/0:16,1:17:18.84:0,19,368	0/0:27,0:27:47.75:0,48,614
chr10	51377272	.	GGGGT	G	694.94	PASS	AB=0.964;AC=24;AF=0.429;AN=56;BaseQRankSum=8.586;DP=344;FS=4.989;HRun=0;HaplotypeScore=72.8915;InbreedingCoeff=0.7940;MQ=79.45;MQ0=0;MQRankSum=-5.642;QD=4.66;ReadPosRankSum=1.241;VQSLOD=1.0321;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:16,1:17:20.71:124,21,0	1/1:4,0:4:2.87:27,3,0	0/0:17,0:17:38.91:0,39,556	0/0:9,0:9:7.22:0,7,180	0/0:12,0:12:27.09:0,27,590	1/1:17,0:17:11.28:62,11,0	1/1:12,0:12:11.44:91,11,0	0/1:12,1:13:15.02:15,0,354	0/0:11,0:11:30.02:0,30,657	0/0:14,0:14:32.26:0,32,430	0/0:9,0:9:24.07:0,24,505	1/1:13,3:16:19.39:207,19,0	1/1:14,0:14:8.49:53,8,0	0/0:12,0:12:32.93:0,33,655	1/1:10,0:10:11.36:56,11,0	1/1:10,0:10:11.49:63,11,0	0/0:25,0:25:41.29:0,41,1285	1/1:9,0:9:8.81:47,9,0	0/0:6,0:6:14.85:0,15,156	0/0:12,0:12:33.07:0,33,638	0/0:19,0:19:45.56:0,46,744	0/1:6,0:6:0:0,0,0	1/1:4,0:4:2.38:14,2,0	1/1:17,0:17:17.82:140,18,0	0/0:10,0:10:23.71:0,24,351	0/0:13,0:13:30.05:0,30,550	0/0:21,0:21:56.55:0,57,1256	0/0:5,0:5:15.03:0,15,283
chr10	51377273	.	GGGT	G	1673.88	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=8.309;DP=345;FS=0.000;HRun=0;HaplotypeScore=64.3338;InbreedingCoeff=0.8832;MQ=80.45;MQ0=0;MQRankSum=-4.930;QD=12.78;ReadPosRankSum=0.232;VQSLOD=2.8895;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:17,1:18:30.62:253,31,0	1/1:3,1:4:6:52,6,0	0/0:18,0:18:44.04:0,44,546	0/0:10,0:10:5.77:0,6,195	0/0:12,0:12:27.08:0,27,473	1/1:6,10:16:12:158,12,0	1/1:6,6:12:11.98:163,12,0	0/0:14,0:14:11.87:0,12,340	0/0:11,0:11:30.02:0,30,540	0/0:14,0:14:35.24:0,35,382	0/0:9,0:9:24.08:0,24,425	1/1:5,11:16:20.19:261,20,0	1/1:5,9:14:8.83:112,9,0	0/0:12,0:12:32.94:0,33,572	1/1:4,4:8:12.04:184,12,0	1/1:3,7:10:12:159,12,0	0/0:27,0:27:45.55:0,46,1080	1/1:8,0:8:20.99:199,21,0	0/0:7,0:7:18.31:0,18,158	0/0:12,0:12:36.03:0,36,555	0/0:19,0:19:45.07:0,45,651	0/1:4,0:4:0:0,0,0	1/1:0,4:4:3.13:46,3,0	1/1:13,4:17:29.98:296,30,0	0/0:10,0:10:23.65:0,24,300	0/0:13,0:13:30.03:0,30,445	0/0:21,0:21:56.55:0,57,1044	0/0:5,0:5:15.02:0,15,234
chr10	51377275	.	GT	G	952.03	PASS	AB=0.750;AC=24;AF=0.429;AN=56;BaseQRankSum=8.854;DP=343;FS=3.239;HRun=1;HaplotypeScore=57.1483;InbreedingCoeff=0.8295;MQ=81.60;MQ0=0;MQRankSum=-3.017;QD=7.16;ReadPosRankSum=0.606;VQSLOD=0.8459;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:17:32.80:246,33,0	1/1:4,0:4:6:52,6,0	0/0:19,0:19:37.40:0,37,389	0/0:10,0:10:4.89:0,5,142	0/0:11,0:11:25.32:0,25,239	1/1:13,2:15:11.10:69,11,0	1/1:8,3:11:11.63:65,12,0	0/0:16,0:16:23.26:0,23,295	0/0:11,0:11:29.84:0,30,308	0/0:14,0:14:23.38:0,23,246	0/0:9,1:10:23.99:0,24,237	1/1:15,1:16:19.12:109,19,0	1/1:12,2:14:8.85:55,9,0	0/0:12,0:12:32.74:0,33,327	1/1:5,3:8:11.70:68,12,0	1/1:8,1:9:11.74:71,12,0	0/0:25,0:25:46.76:0,47,607	1/1:7,1:8:20.95:173,21,0	0/1:7,0:7:3.02:3,0,123	0/0:12,0:12:11.81:0,12,324	0/0:19,0:19:39.65:0,40,398	0/1:0,4:4:0:0,0,0	1/1:4,0:4:3.76:19,4,0	1/1:13,3:16:29.69:227,30,0	0/0:10,1:11:26.53:0,27,220	0/0:14,0:14:32.45:0,32,284	0/0:21,0:21:56.96:0,57,633	0/0:5,0:5:10.20:0,10,136
chr10	51381459	.	G	GA	5416.36	PASS	AB=0.772;AC=24;AF=0.429;AN=56;BaseQRankSum=-10.645;DP=699;FS=7.759;HRun=11;HaplotypeScore=87.0658;InbreedingCoeff=0.7039;MQ=77.71;MQ0=0;MQRankSum=0.330;QD=15.09;ReadPosRankSum=2.700;VQSLOD=5.2925;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:15,41:57:35.08:914,35,0	0/1:3,5:9:5.36:118,0,5	0/0:28,0:25:21.08:0,21,226	0/0:19,0:16:11.39:0,11,145	0/0:31,1:33:34.24:0,34,432	0/1:7,10:17:36.61:211,0,37	1/1:4,11:16:12.67:296,13,0	0/0:23,0:24:64.48:0,64,480	0/0:21,0:22:46.76:0,47,347	0/0:17,0:17:41.22:0,41,309	0/0:25,0:25:25.19:0,25,343	1/1:3,16:20:36.07:365,36,0	1/1:5,14:20:22.49:376,22,0	0/0:24,0:24:53.43:0,53,403	1/1:4,24:30:41.77:625,42,0	1/1:5,21:26:36.88:552,37,0	0/1:29,1:34:13.65:14,0,407	1/1:1,15:17:42:413,42,0	0/0:19,0:19:53.79:0,54,416	0/0:22,0:23:59.93:0,60,446	0/0:23,2:27:5.91:0,6,392	1/1:7,18:25:30.70:478,31,0	1/1:2,18:21:35.91:349,36,0	1/1:7,27:36:31.50:652,31,0	0/0:26,1:27:32.03:0,32,421	0/0:30,0:30:59.67:0,60,460	0/1:26,4:31:54.05:54,0,353	0/0:19,0:20:37.80:0,38,284
chr10	51386875	.	GGA	G	165.25	PASS	AB=0.902;AC=10;AF=0.192;AN=52;BaseQRankSum=3.132;DP=332;FS=4.028;HRun=0;HaplotypeScore=29.5638;InbreedingCoeff=-0.0660;MQ=45.75;MQ0=45;MQRankSum=0.023;QD=1.08;ReadPosRankSum=-0.485;VQSLOD=0.2660;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:11,0:12:23.62:24,0,79	./.	0/0:59,0:5:8.88:0,9,66	0/1:66,0:11:5.29:5,0,49	0/0:8,0:8:15.04:0,15,202	0/0:9,0:8:15.05:0,15,217	0/1:9,4:11:80.94:81,0,197	0/1:18,0:14:33.53:34,0,275	0/0:6,0:6:15.03:0,15,204	0/0:10,0:9:11.97:0,12,152	0/0:5,0:5:6.02:0,6,87	0/0:6,0:5:15.03:0,15,199	0/1:14,1:14:4.38:4,0,363	0/0:6,0:5:9.03:0,9,133	0/0:11,0:11:24.01:0,24,327	0/0:5,0:5:9.03:0,9,134	0/1:7,0:7:0.52:1,0,141	./.	0/0:3,0:3:6.02:0,6,80	1/1:1,2:3:6.02:70,6,0	0/0:8,0:7:18.06:0,18,258	0/0:7,0:7:15.05:0,15,219	0/1:6,4:9:22.96:23,0,118	0/1:6,2:8:51.97:52,0,156	0/0:8,0:8:15.05:0,15,221	0/0:8,0:6:7.19:0,7,131	0/0:12,0:12:3.91:0,4,297	0/0:4,1:1:2.98:0,3,22
chr10	51388528	.	CATATATAT	C	3555.94	PASS	AB=1.000;AC=25;AF=0.463;AN=54;BaseQRankSum=8.269;DP=299;FS=0.641;HRun=0;HaplotypeScore=86.0901;InbreedingCoeff=0.7172;MQ=63.64;MQ0=2;MQRankSum=-8.432;QD=21.95;ReadPosRankSum=1.011;VQSLOD=2.3634;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,12:21:12.72:227,13,0	1/1:2,4:6:15.05:368,15,0	1/1:12,0:7:2.43:10,2,0	0/1:16,0:6:13.14:13,0,18	0/0:5,0:5:6.02:0,6,252	1/1:5,16:21:34.67:778,35,0	1/1:3,3:6:9.03:173,9,0	0/0:33,0:37:80.99:0,81,2354	0/0:4,0:4:9.03:0,9,302	0/0:5,0:6:9.03:0,9,317	0/0:9,0:9:15.05:0,15,552	1/1:6,4:12:9.03:190,9,0	1/1:3,10:13:12.04:311,12,0	0/0:6,0:6:6.02:0,6,193	1/1:3,6:9:15.05:349,15,0	1/1:4,5:9:18.05:336,18,0	0/0:10,0:11:18.06:0,18,494	1/1:7,9:16:18.01:392,18,0	0/0:7,0:6:18.05:0,18,596	0/0:7,0:7:12.04:0,12,495	0/0:2,0:3:6.02:0,6,191	1/1:6,3:9:3.01:78,3,0	1/1:3,9:12:1.51:331,2,0	./.	0/0:2,0:2:3.01:0,3,126	0/0:4,0:6:15.04:0,15,384	0/0:9,0:9:15.04:0,15,524	0/0:16,0:20:36.12:0,36,1380
chr10	51390778	.	A	AT	5591.88	PASS	AB=0.723;AC=15;AF=0.268;AN=56;BaseQRankSum=10.845;DP=997;FS=7.408;HRun=0;HaplotypeScore=187.1983;InbreedingCoeff=0.1285;MQ=47.08;MQ0=30;MQRankSum=-5.389;QD=12.32;ReadPosRankSum=0.211;VQSLOD=5.2089;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:23,27:49:37.92:498,0,38	0/1:10,5:16:99:221,0,123	0/0:60,0:6:15.05:0,15,209	0/0:74,0:9:8.54:0,9,115	0/0:26,0:26:71.51:0,72,978	1/1:26,6:32:18.32:253,18,0	0/1:15,16:30:99:256,0,196	0/0:33,0:30:85.82:0,86,1158	0/0:27,0:27:81.05:0,81,1082	0/0:27,0:25:75.25:0,75,1044	0/0:17,0:17:47.74:0,48,611	1/1:49,15:65:1.28:829,1,0	0/1:27,20:48:74.80:894,0,75	0/0:32,0:32:84.28:0,84,1168	0/1:42,11:53:70.08:512,0,70	0/1:22,10:32:9.95:402,0,10	0/0:32,0:32:90.06:0,90,1224	0/1:15,13:27:99:436,0,157	0/0:24,0:21:54.14:0,54,711	0/0:20,0:20:57.19:0,57,795	0/0:74,1:74:99:0,143,2336	1/1:21,11:32:35.33:533,35,0	0/1:20,10:30:20.60:493,0,21	0/1:22,15:37:55.53:264,0,56	0/0:29,0:29:78.26:0,78,1088	0/0:37,0:37:99:0,108,1456	0/0:17,0:17:43.07:0,43,622	0/0:13,0:13:39.13:0,39,528
chr10	51390781	.	CACGA	C	1920.03	PASS	AB=0.977;AC=21;AF=0.375;AN=56;BaseQRankSum=11.655;DP=945;FS=41.363;HRun=0;HaplotypeScore=217.9557;InbreedingCoeff=0.4505;MQ=47.01;MQ0=27;MQRankSum=-5.965;QD=3.77;ReadPosRankSum=-0.882;VQSLOD=1.0679;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:45,0:44:15.40:144,0,15	1/1:15,0:15:17.89:235,18,0	0/1:56,0:6:0.14:0,0,75	0/0:69,0:7:1.91:0,2,40	0/0:26,0:26:62.08:0,62,1425	1/1:30,0:30:7.11:68,7,0	1/1:28,0:27:3.41:215,3,0	0/0:32,0:29:50.57:0,51,922	0/0:25,0:25:60.03:0,60,1168	0/0:29,0:27:75.06:0,75,1301	0/0:17,0:17:20.34:0,20,795	1/1:60,0:60:32.09:268,32,0	0/1:47,0:47:65.57:89,0,66	0/0:29,0:29:69.62:0,70,1272	1/1:48,0:48:18.06:211,18,0	1/1:32,0:32:8.19:75,8,0	0/1:32,0:32:24.45:24,0,1495	0/1:22,3:24:30.18:478,0,30	0/0:23,0:20:53.23:0,53,815	0/0:20,0:20:28.75:0,29,775	0/0:75,0:74:99:0,122,2816	0/1:30,0:30:1.87:40,0,2	1/1:27,0:27:14.11:125,14,0	0/1:32,2:34:34.42:135,0,34	0/0:28,0:28:59.43:0,59,1351	0/0:37,0:37:39:0,39,1513	0/0:16,0:16:39.01:0,39,484	0/0:9,0:9:26.98:0,27,487
chr10	51390783	.	CGA	C	1795.06	PASS	AB=0.921;AC=23;AF=0.411;AN=56;BaseQRankSum=11.712;DP=891;FS=23.267;HRun=0;HaplotypeScore=185.4769;InbreedingCoeff=0.3626;MQ=47.01;MQ0=25;MQRankSum=-5.424;QD=3.61;ReadPosRankSum=-0.797;VQSLOD=0.9980;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:35,7:43:56.87:135,0,57	1/1:10,3:13:17.04:202,17,0	0/1:41,5:5:0.14:0,0,75	0/0:49,11:7:1.91:0,2,40	0/0:26,0:26:59.21:0,59,1139	1/1:27,1:28:10.57:79,11,0	1/1:20,4:25:3.42:226,3,0	0/0:29,1:27:24.69:0,25,925	0/0:23,2:25:5.25:0,5,844	0/0:29,0:27:64.68:0,65,1142	0/0:17,0:17:18.59:0,19,608	1/1:54,1:57:32.21:277,32,0	0/1:41,0:41:38.86:80,0,39	0/0:30,0:30:73.79:0,74,1044	1/1:43,1:45:18.04:186,18,0	1/1:30,0:30:8.34:65,8,0	0/1:33,0:33:21.46:21,0,1290	0/1:18,5:23:8.22:413,0,8	0/0:24,0:21:40.82:0,41,678	0/1:18,0:18:7.35:7,0,624	0/0:69,1:70:89.92:0,90,2300	0/1:28,0:29:1.87:40,0,2	1/1:24,0:24:14.27:110,14,0	0/1:26,2:29:24.14:136,0,24	0/0:28,0:28:59.24:0,59,1145	0/0:36,0:36:34.36:0,34,1216	0/0:15,0:15:35.15:0,35,394	0/1:8,0:9:0.41:0,0,322
chr10	51390784	.	GAA	G	2294.59	PASS	AB=0.957;AC=22;AF=0.393;AN=56;BaseQRankSum=15.691;DP=873;FS=4.569;HRun=2;HaplotypeScore=179.5321;InbreedingCoeff=0.6640;MQ=46.17;MQ0=25;MQRankSum=-4.015;QD=5.81;ReadPosRankSum=-2.062;VQSLOD=-0.6517;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:37,5:41:97.24:196,0,97	1/1:13,0:13:23.35:158,23,0	0/0:45,0:4:5.01:0,5,53	0/0:62,0:6:0.96:0,1,33	0/0:26,0:26:47.98:0,48,1037	1/1:28,0:28:12.19:84,12,0	0/1:27,0:26:1.85:187,0,2	0/0:27,0:24:38.81:0,39,562	0/0:27,0:27:26.84:0,27,819	0/0:29,0:27:78.61:0,79,907	0/0:18,0:18:40.59:0,41,638	1/1:53,4:57:58.40:391,58,0	1/1:38,1:39:9.06:253,9,0	0/0:29,0:29:65.22:0,65,996	1/1:44,1:45:37.84:257,38,0	1/1:27,2:29:22.67:159,23,0	0/0:33,0:33:12.89:0,13,1083	1/1:24,0:23:7.70:262,8,0	0/0:22,0:19:46.29:0,46,574	0/0:17,0:17:22.35:0,22,500	0/0:68,0:68:70.15:0,70,1776	1/1:28,1:29:31.23:206,31,0	1/1:22,2:24:29.83:233,30,0	0/1:27,2:29:89.49:106,0,89	0/0:26,0:26:43.81:0,44,840	0/0:35,0:35:14.60:0,15,1039	0/0:13,0:13:32.96:0,33,334	0/1:9,0:9:6.86:7,0,238
chr10	51390785	.	AAC	A	179.31	PASS	AB=0.967;AC=17;AF=0.315;AN=54;BaseQRankSum=6.685;DP=879;FS=8.310;HRun=0;HaplotypeScore=191.6220;InbreedingCoeff=0.1392;MQ=46.00;MQ0=26;MQRankSum=-3.801;QD=0.41;ReadPosRankSum=1.766;VQSLOD=2.2332;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:41:13.19:0,13,90	1/1:15,0:15:8.31:39,8,0	./.	0/0:59,0:6:0:0,0,0	0/0:26,0:26:51.16:0,51,739	0/1:28,0:28:4.75:5,0,15	0/0:26,0:25:6.74:0,7,29	0/1:28,1:25:21.32:21,0,93	0/0:26,1:27:5.25:0,5,508	0/0:29,0:27:33.08:0,33,430	0/0:18,0:18:30.57:0,31,452	0/1:58,0:58:8.43:13,0,8	0/1:41,0:41:2.21:2,0,61	0/0:27,2:29:17.52:0,18,678	1/1:45,0:45:6.83:30,7,0	1/1:29,0:29:2.70:14,3,0	0/0:33,0:33:12.53:0,13,576	0/1:26,0:25:9.64:10,0,52	0/0:22,0:19:21.53:0,22,294	0/0:17,0:17:17.27:0,17,236	0/1:63,4:67:75.82:76,0,941	0/0:29,0:29:1.82:0,2,5	1/1:24,0:24:5.05:19,5,0	0/0:34,0:34:3.03:0,3,61	0/1:25,0:25:3.73:4,0,359	0/1:35,1:36:19.71:20,0,541	0/0:11,0:11:15.05:0,15,216	0/1:7,2:9:77.66:78,0,125
chr10	51390791	.	C	CGA	1956.78	PASS	AB=0.965;AC=16;AF=0.286;AN=56;BaseQRankSum=11.032;DP=882;FS=0.448;HRun=0;HaplotypeScore=192.4437;InbreedingCoeff=0.0220;MQ=46.95;MQ0=28;MQRankSum=-8.217;QD=4.78;ReadPosRankSum=-4.843;VQSLOD=1.7188;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:35,1:36:99:176,0,207	0/1:12,1:13:46.04:92,0,46	0/1:45,0:7:4.09:4,0,199	0/0:63,0:8:15.05:0,15,205	0/0:31,0:31:83.97:0,84,1302	0/1:26,0:26:23.97:58,0,24	0/1:20,0:19:99:216,0,153	0/0:36,0:32:83.98:0,84,1129	0/0:28,0:28:81.26:0,81,1224	0/0:35,0:33:90.24:0,90,1330	0/0:16,0:16:46.03:0,46,697	0/1:53,4:57:99:276,0,100	0/1:36,2:38:95.47:278,0,95	0/0:34,0:34:87.24:0,87,1298	0/1:43,0:43:24.66:210,0,25	1/1:26,0:26:5.97:180,6,0	0/0:28,0:29:79.34:0,79,1186	0/1:22,2:23:99:178,0,324	0/0:20,0:17:47.61:0,48,632	0/0:20,0:20:54.18:0,54,842	0/0:69,1:68:99:0,141,2349	1/1:27,0:27:2.70:262,3,0	1/1:21,0:21:1.97:173,2,0	0/1:30,2:32:12.75:13,0,239	0/0:26,0:26:61.82:0,62,895	0/0:44,0:44:99:0,126,1848	0/0:11,0:11:26.97:0,27,418	0/0:9,0:9:27.04:0,27,348
chr10	51390797	.	C	CATGA	1301.58	PASS	AB=0.966;AC=13;AF=0.232;AN=56;BaseQRankSum=7.465;DP=856;FS=9.913;HRun=0;HaplotypeScore=200.2787;InbreedingCoeff=-0.0849;MQ=48.54;MQ0=23;MQRankSum=-8.127;QD=3.83;ReadPosRankSum=-0.011;VQSLOD=1.8900;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:24:16.42:16,0,127	0/1:11,1:12:12.53:104,0,13	0/0:41,0:8:21.06:0,21,325	0/0:55,0:13:20.28:0,20,282	0/0:33,0:33:89.68:0,90,1782	0/1:26,0:26:5.70:6,0,59	0/1:15,0:14:10.35:80,0,10	0/0:38,0:34:97.13:0,97,1687	0/0:29,0:29:84.25:0,84,1615	0/0:37,0:36:96.33:0,96,1869	0/0:16,0:16:47.19:0,47,877	0/1:57,0:58:99:205,0,173	0/1:36,0:37:28.36:28,0,206	0/0:34,0:34:87.28:0,87,1663	0/1:45,0:45:69.08:149,0,69	0/1:27,0:27:17.22:50,0,17	0/0:31,0:31:81.26:0,81,1472	0/1:17,3:19:68.14:459,0,68	0/0:21,0:18:50.48:0,50,833	0/0:21,0:21:57.16:0,57,1055	0/0:69,0:67:99:0,151,3012	0/1:26,0:26:42.31:42,0,122	1/1:20,0:20:8.96:124,9,0	0/1:25,4:29:20.84:193,0,21	0/0:24,0:24:63.05:0,63,1209	0/0:45,0:45:99:0,126,2309	0/0:10,0:10:23.85:0,24,476	0/0:11,0:11:30.06:0,30,456
chr10	51390799	.	C	CATGA	1202.58	PASS	AB=0.939;AC=11;AF=0.196;AN=56;BaseQRankSum=8.774;DP=862;FS=8.554;HRun=0;HaplotypeScore=198.0461;InbreedingCoeff=-0.1716;MQ=49.44;MQ0=22;MQRankSum=-7.715;QD=3.88;ReadPosRankSum=2.473;VQSLOD=1.4190;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:27,2:28:51.72:138,0,52	0/1:13,0:13:47.38:47,0,201	0/0:41,0:8:13.79:0,14,257	0/0:58,0:15:19.22:0,19,279	0/0:33,0:33:89.69:0,90,1781	0/1:26,0:26:24.82:57,0,25	0/1:8,5:13:3.08:294,0,3	0/0:36,0:32:93.16:0,93,1606	0/0:30,0:30:81.28:0,81,1575	0/0:37,0:36:99:0,102,1869	0/0:17,0:17:50.65:0,51,927	0/1:59,1:61:99:199,0,222	0/0:37,0:37:10.24:0,10,236	0/0:33,0:33:87.28:0,87,1627	0/1:45,1:46:82.04:82,0,219	0/1:28,0:28:8.34:8,0,97	0/0:30,0:30:75.61:0,76,1463	0/1:17,1:18:65.35:345,0,65	0/0:21,0:18:51.01:0,51,930	0/0:20,0:20:54.18:0,54,1066	0/0:70,0:68:99:0,160,3068	0/1:26,1:27:54.77:55,0,123	0/1:18,0:18:13.01:23,0,13	0/1:25,1:29:91.03:101,0,91	0/0:25,0:25:60.04:0,60,1160	0/0:43,0:43:99:0,126,2404	0/0:10,0:10:23.85:0,24,476	0/0:10,0:10:27.05:0,27,451
chr10	51391734	.	T	TA	1050.63	PASS	AB=0.881;AC=12;AF=0.214;AN=56;BaseQRankSum=-4.019;DP=616;FS=0.492;HRun=11;HaplotypeScore=77.4599;InbreedingCoeff=0.1460;MQ=79.28;MQ0=0;MQRankSum=0.576;QD=5.18;ReadPosRankSum=-0.049;VQSLOD=1.4824;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,28:32:16.55:515,17,0	0/0:8,0:8:17.93:0,18,139	0/1:21,0:17:14.14:14,0,69	0/1:32,0:24:5.08:5,0,75	0/0:18,0:18:23.82:0,24,186	1/1:5,15:20:18.59:354,19,0	0/1:9,9:18:33.81:222,0,34	0/0:26,0:29:50.85:0,51,363	0/0:15,3:18:5.42:0,5,225	0/0:21,0:21:26.80:0,27,207	0/0:21,2:25:2.95:0,3,368	0/0:35,1:37:67.20:0,67,694	0/0:25,0:26:64.72:0,65,488	0/0:18,1:19:10.42:0,10,254	0/1:18,2:20:10.96:11,0,294	0/0:27,0:27:45.61:0,46,463	0/0:13,0:18:41.02:0,41,279	0/0:22,0:23:50.41:0,50,361	0/0:26,1:27:13.26:0,13,370	0/0:31,1:32:20.29:0,20,341	0/1:11,2:13:45.99:46,0,55	0/0:11,0:12:31.89:0,32,236	0/1:10,2:12:9.56:10,0,118	0/0:11,0:11:20.89:0,21,163	0/1:21,3:24:4.14:4,0,338	0/0:32,0:37:72.87:0,73,516	0/0:24,1:24:26.25:0,26,383	0/1:8,1:9:23.66:24,0,95
chr10	51396699	.	AAAT	A	1714.84	PASS	AC=24;AF=0.444;AN=54;BaseQRankSum=8.242;DP=231;FS=2.251;HRun=0;HaplotypeScore=33.3598;InbreedingCoeff=0.7533;MQ=63.40;MQ0=0;MQRankSum=-0.031;QD=24.85;ReadPosRankSum=3.591;VQSLOD=3.2615;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,13:17:39.13:557,39,0	1/1:0,4:4:9.03:124,9,0	0/0:8,0:5:6.02:0,6,115	0/0:6,0:4:9.03:0,9,158	0/0:7,0:7:9.02:0,9,147	1/1:2,6:8:15.05:209,15,0	1/1:0,3:3:6.02:87,6,0	0/0:32,0:32:63.20:0,63,1167	0/0:2,0:2:3.01:0,3,61	0/0:4,0:4:9.03:0,9,182	0/0:9,0:9:18.04:0,18,328	1/1:2,4:6:12.04:174,12,0	1/1:1,3:4:9.03:130,9,0	0/0:3,0:3:6.02:0,6,103	1/1:2,2:4:6.02:87,6,0	1/1:0,2:2:6.02:87,6,0	0/0:17,0:17:39.11:0,39,758	1/1:2,11:13:24.08:347,24,0	0/0:19,0:18:51.17:0,51,1002	0/0:4,0:4:6.02:0,6,122	./.	1/1:1,1:2:3.01:43,3,0	1/1:3,1:4:3.01:43,3,0	1/1:2,0:2:2.98:21,3,0	0/0:13,0:13:33.11:0,33,666	0/0:7,0:7:12.04:0,12,244	0/0:9,0:9:18.06:0,18,367	0/0:22,0:21:51.18:0,51,1039
chr10	51397754	.	G	GCACACACACACACACA	1493.28	PASS	AB=0.970;AC=27;AF=0.482;AN=56;BaseQRankSum=3.101;DP=519;FS=8.573;HRun=0;HaplotypeScore=195.8710;InbreedingCoeff=0.7702;MQ=46.69;MQ0=17;MQRankSum=-1.097;QD=5.95;ReadPosRankSum=-6.468;VQSLOD=-0.6728;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:23:7.99:79,8,0	1/1:5,0:5:3.01:49,3,0	1/1:33,0:8:6.58:18,7,0	0/1:31,0:7:7.98:8,0,22	0/0:23,0:23:52.90:0,53,1665	1/1:19,0:19:20.78:249,21,0	1/1:21,0:17:11.96:95,12,0	0/0:21,0:16:27.65:0,28,206	0/0:12,0:13:23.77:0,24,705	0/0:21,0:21:42.93:0,43,1415	0/0:19,0:21:53.58:0,54,1590	1/1:18,0:18:20.93:210,21,0	1/1:8,0:8:11.96:199,12,0	0/0:10,0:12:27.05:0,27,862	1/1:14,0:14:3.01:105,3,0	1/1:11,0:11:5.95:44,6,0	0/0:21,0:25:29.02:0,29,1154	1/1:8,11:26:6.02:438,6,0	0/0:12,0:8:8.99:0,9,385	0/0:24,0:25:63.11:0,63,1875	0/0:18,0:18:48.13:0,48,1373	1/1:10,0:9:8.99:74,9,0	1/1:17,0:17:6.01:103,6,0	1/1:13,0:12:3.01:25,3,0	0/0:19,0:20:56.43:0,56,1475	0/0:25,0:24:47.40:0,47,1602	0/0:9,0:9:14.92:0,15,429	0/0:20,0:20:56.98:0,57,1447
chr10	51402566	.	C	CA	3982.17	PASS	AB=0.950;AC=27;AF=0.482;AN=56;BaseQRankSum=9.873;DP=625;FS=6.814;HRun=9;HaplotypeScore=94.2671;InbreedingCoeff=0.8997;MQ=55.17;MQ0=13;MQRankSum=-5.283;QD=14.91;ReadPosRankSum=2.863;VQSLOD=3.6688;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:24:47.67:365,48,0	1/1:14,0:14:32.35:258,32,0	0/0:43,1:7:8.96:0,9,77	0/0:55,0:11:11.14:0,11,72	0/1:18,1:19:15.88:16,0,322	1/1:15,0:15:41.62:313,42,0	1/1:17,0:17:32.76:251,33,0	0/0:26,0:26:52.20:0,52,443	0/0:14,0:14:26:0,26,250	0/0:29,0:28:64.22:0,64,549	0/0:20,0:20:47.57:0,48,401	1/1:11,0:10:16.97:149,17,0	1/1:24,0:24:46.58:377,47,0	0/0:24,0:24:60.80:0,61,539	1/1:21,1:22:27.83:302,28,0	1/1:19,0:17:41.21:297,41,0	0/0:28,0:28:50.66:0,51,553	1/1:14,0:13:15.31:105,15,0	0/0:24,0:22:53.02:0,53,463	0/0:21,0:21:47.97:0,48,413	0/0:4,0:5:9:0,9,78	1/1:13,1:13:34.35:271,34,0	1/1:22,1:22:56.46:467,56,0	1/1:13,0:12:13.01:115,13,0	1/1:8,29:35:63.17:697,63,0	0/0:30,0:30:71.94:0,72,618	0/0:32,0:32:43.09:0,43,455	0/0:6,0:5:15:0,15,130
chr10	51402571	.	A	AC	5937.14	PASS	AB=0.882;AC=24;AF=0.429;AN=56;BaseQRankSum=4.170;DP=612;FS=1.547;HRun=0;HaplotypeScore=88.9053;InbreedingCoeff=0.8032;MQ=54.17;MQ0=11;MQRankSum=-7.139;QD=24.43;ReadPosRankSum=3.128;VQSLOD=5.7298;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,17:26:56.96:734,57,0	1/1:3,11:14:38.68:464,39,0	0/0:40,0:6:10.52:0,11,128	0/0:52,0:10:17.78:0,18,158	0/0:19,0:19:36.68:0,37,651	1/1:2,13:15:45.12:601,45,0	1/1:6,9:15:36.11:488,36,0	0/0:28,0:28:70.79:0,71,887	0/0:14,0:14:39.01:0,39,483	0/0:26,0:25:75.22:0,75,989	0/0:20,0:20:60.08:0,60,753	1/1:5,4:8:2.35:240,2,0	1/1:3,19:23:15.46:638,15,0	0/0:23,0:23:69.04:0,69,915	1/1:5,15:20:23.34:516,23,0	1/1:7,14:19:17.55:559,18,0	0/0:29,0:29:78.60:0,79,1018	1/1:8,4:11:6.13:217,6,0	0/0:29,0:27:64.23:0,64,819	0/0:20,0:20:57.10:0,57,734	0/0:5,0:5:15:0,15,172	1/1:3,12:14:36.81:448,37,0	1/1:5,18:22:63.07:809,63,0	0/1:9,4:12:10.28:162,0,10	0/1:37,0:35:59.97:60,0,107	0/0:29,0:29:87.05:0,87,1125	0/0:29,0:29:77.80:0,78,945	0/0:6,0:5:15.05:0,15,209
chr10	51402586	.	C	CA	1465.06	PASS	AB=0.827;AC=24;AF=0.429;AN=56;BaseQRankSum=8.674;DP=606;FS=3.080;HRun=11;HaplotypeScore=104.2916;InbreedingCoeff=0.2952;MQ=53.82;MQ0=6;MQRankSum=-7.858;QD=4.27;ReadPosRankSum=-1.594;VQSLOD=1.4436;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:8,20:28:44.75:317,0,45	1/1:11,0:13:4.23:37,4,0	0/1:30,0:9:10.89:11,0,37	0/1:37,0:6:0.64:1,0,24	0/0:13,1:16:11.29:0,11,238	0/1:7,9:16:4.39:320,0,4	0/1:6,6:12:2.19:160,0,2	0/0:24,1:26:22.28:0,22,334	0/0:16,1:17:8.34:0,8,242	0/1:22,2:25:2.10:2,0,341	0/1:17,4:21:68.43:68,0,210	1/1:9,0:10:1.12:28,1,0	0/1:15,0:20:14.48:54,0,14	0/1:24,1:25:5.91:6,0,303	0/1:17,0:19:18.09:56,0,18	1/1:14,0:18:20.44:120,20,0	0/0:28,0:29:40.62:0,41,485	1/1:11,0:11:14.41:83,14,0	0/0:31,1:33:30.12:0,30,492	0/0:17,0:20:44.80:0,45,318	0/0:12,0:12:24.31:0,24,184	1/1:10,1:16:26.94:149,27,0	1/1:11,0:23:40.13:211,40,0	1/1:11,0:10:2.49:20,2,0	0/0:32,1:33:69.72:0,70,515	0/0:31,0:33:40.70:0,41,461	0/0:26,4:30:40.83:0,41,470	0/0:12,0:11:23.89:0,24,185
chr10	51402687	.	A	AGTATATATAT	21079.96	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-6.769;DP=672;FS=20.005;HRun=0;HaplotypeScore=192.6257;InbreedingCoeff=0.9765;MQ=77.66;MQ0=0;MQRankSum=-15.799;QD=98.50;ReadPosRankSum=-2.479;VQSLOD=2.8631;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,10:25:36.10:1520,36,0	1/1:6,4:10:24.08:1158,24,0	0/0:16,0:16:45.11:0,45,1240	0/0:25,0:25:48.19:0,48,1621	0/0:33,0:33:96.27:0,96,2836	1/1:8,7:15:33.11:1489,33,0	1/1:10,16:25:63.20:3029,63,0	0/0:36,0:35:96.33:0,96,2997	0/0:27,0:27:81.28:0,81,2651	0/0:43,0:43:99:0,129,3974	0/0:25,0:25:75.21:0,75,2046	1/1:9,7:16:39.13:1607,39,0	1/1:6,15:21:60.21:2958,60,0	0/0:31,0:31:90.31:0,90,2947	1/1:14,11:23:54.19:2455,54,0	1/1:16,12:27:60.19:2696,60,0	0/0:26,0:26:75.26:0,75,2353	1/1:1,2:3:4.07:316,4,0	0/0:27,0:27:81.27:0,81,2425	0/0:27,0:27:75.24:0,75,2287	0/0:41,0:41:99:0,117,3607	1/1:10,4:14:24.07:1009,24,0	1/1:8,13:21:48.16:2161,48,0	1/1:9,1:10:15.05:681,15,0	0/0:22,0:21:60.21:0,60,1902	0/0:32,0:32:93.27:0,93,2642	0/0:31,0:31:90.31:0,90,2920	0/0:16,0:16:42.12:0,42,1253
chr10	51402689	.	T	TA	1868.72	PASS	AB=0.974;AC=17;AF=0.304;AN=56;BaseQRankSum=16.397;DP=639;FS=12.891;HRun=0;HaplotypeScore=136.9595;InbreedingCoeff=0.2799;MQ=78.11;MQ0=0;MQRankSum=-14.902;QD=9.89;ReadPosRankSum=0.230;VQSLOD=3.4904;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:23:54.07:125,0,54	1/1:8,1:9:2.47:122,2,0	0/0:16,0:16:48.07:0,48,614	0/0:23,0:23:66.17:0,66,877	0/0:33,0:33:96.26:0,96,1260	0/1:16,0:17:72.31:72,0,154	0/1:23,1:24:76.50:302,0,76	0/0:34,0:33:99:0,99,1349	0/0:27,0:27:81.27:0,81,1133	0/0:43,0:43:99:0,129,1785	0/0:25,0:25:75.22:0,75,1001	0/1:14,0:14:38.31:140,0,38	1/1:19,0:19:5.06:238,5,0	0/0:31,0:31:93.29:0,93,1281	0/1:21,0:19:22.03:190,0,22	0/1:20,2:22:31.15:287,0,31	0/0:26,0:26:78.23:0,78,1067	1/1:3,0:3:5.36:22,5,0	0/0:27,0:27:81.26:0,81,1103	0/0:26,0:26:75.24:0,75,1033	0/0:42,0:42:99:0,120,1620	0/1:11,0:11:19.84:83,0,20	1/1:18,2:20:7.38:404,7,0	1/1:5,1:6:5.69:53,6,0	0/0:22,0:21:63.21:0,63,879	0/0:31,0:31:93.27:0,93,1212	0/0:30,0:30:90.30:0,90,1252	0/0:14,0:14:42.12:0,42,556
chr10	51402762	.	CGT	C	8692.40	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=15.824;DP=846;FS=15.867;HRun=0;HaplotypeScore=124.6381;InbreedingCoeff=0.9640;MQ=61.76;MQ0=2;MQRankSum=0.302;QD=25.64;ReadPosRankSum=2.272;VQSLOD=4.9765;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,30:40:71.89:816,72,0	1/1:3,8:11:21.06:255,21,0	0/0:44,1:25:2.68:0,3,468	0/0:37,0:25:42.03:0,42,535	0/0:22,1:23:11.79:0,12,687	1/1:3,25:28:23.68:735,24,0	1/1:9,28:37:69.13:805,69,0	0/0:44,0:44:84.29:0,84,1342	0/0:33,0:33:90.31:0,90,1441	0/0:34,1:35:41.85:0,42,1143	0/0:30,0:30:69.22:0,69,1083	1/1:5,25:30:75.23:910,75,0	1/1:3,27:30:81.17:950,81,0	0/0:34,0:34:78.26:0,78,1243	1/1:6,34:40:53.79:1103,54,0	1/1:6,33:39:99:1170,99,0	0/0:30,1:31:29.85:0,30,976	1/1:2,10:12:30.09:364,30,0	0/0:25,0:25:48.16:0,48,750	0/0:17,1:18:11.76:0,12,686	0/0:58,0:57:99:0,138,2160	1/1:5,20:25:36.11:437,36,0	1/1:4,18:22:48.15:582,48,0	1/1:0,25:25:48.09:566,48,0	0/0:21,0:21:57.19:0,57,920	0/0:34,1:34:38.88:0,39,1119	0/0:28,2:30:26.81:0,27,931	0/0:8,0:8:24.08:0,24,387
chr10	51404053	.	G	GAATACTTTTGTCCAGTGAGTAA	3449.20	PASS	AB=0.744;AC=38;AF=0.950;AN=40;BaseQRankSum=-2.482;DP=55;FS=15.198;HRun=0;HaplotypeScore=29.8225;InbreedingCoeff=-0.2072;MQ=133.32;MQ0=0;MQRankSum=-1.604;QD=70.39;ReadPosRankSum=-0.330;VQSLOD=0.9978;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,0:2:6.02:108,6,0	1/1:2,0:2:6.02:127,6,0	0/1:6,0:11:64.44:1233,0,64	0/1:3,1:4:26.27:591,0,26	./.	1/1:2,0:2:3.01:94,3,0	1/1:2,0:2:6.02:135,6,0	1/1:2,0:2:3:25,3,0	1/1:2,0:2:2.99:24,3,0	./.	./.	1/1:4,0:4:12.04:227,12,0	./.	1/1:2,0:2:3.01:38,3,0	1/1:1,0:1:3.01:76,3,0	1/1:1,0:1:3.01:96,3,0	./.	./.	./.	1/1:1,0:1:3.01:76,3,0	1/1:2,0:2:2.99:24,3,0	1/1:3,0:3:6.02:129,6,0	1/1:1,0:1:3.01:40,3,0	1/1:3,0:3:6.02:120,6,0	1/1:1,0:1:3.01:74,3,0	1/1:1,0:1:3.01:47,3,0	1/1:2,0:2:6.02:168,6,0	./.
chr10	51405686	.	G	GCT	2445.59	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=10.274;DP=487;FS=42.201;HRun=0;HaplotypeScore=87.0414;InbreedingCoeff=0.9456;MQ=67.35;MQ0=4;MQRankSum=-6.435;QD=13.66;ReadPosRankSum=5.473;VQSLOD=1.7037;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,29:32:8.77:113,9,0	1/1:4,0:4:3.01:36,3,0	0/0:23,0:17:47.53:0,48,487	0/0:27,0:21:18.86:0,19,383	0/0:11,0:11:24.02:0,24,251	0/0:20,0:19:25.49:0,25,176	0/0:16,0:15:11.96:0,12,96	0/0:8,0:8:24.04:0,24,247	0/0:16,0:16:38.73:0,39,363	0/0:16,0:16:38.94:0,39,363	0/0:15,0:15:35.85:0,36,369	1/1:20,0:21:29.85:331,30,0	1/1:8,0:8:14.98:199,15,0	0/0:19,0:19:44.93:0,45,473	1/1:22,0:22:30.10:398,30,0	1/1:19,0:19:29.99:420,30,0	0/0:25,0:25:72.43:0,72,773	1/1:17,0:17:30.07:355,30,0	0/0:15,0:14:33.08:0,33,407	0/0:19,0:19:50.98:0,51,548	0/0:22,0:22:53.90:0,54,581	1/1:22,0:23:26.97:332,27,0	1/1:13,0:13:8.92:96,9,0	1/1:20,0:17:31.72:377,32,0	0/0:13,0:13:33.07:0,33,378	0/0:20,0:20:48.45:0,48,494	0/0:12,0:11:26.94:0,27,220	0/0:11,0:11:26.96:0,27,251
chr10	51405690	.	T	TCTC	3812.54	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=7.525;DP=481;FS=44.261;HRun=0;HaplotypeScore=94.0330;InbreedingCoeff=0.9475;MQ=66.34;MQ0=9;MQRankSum=-5.926;QD=20.50;ReadPosRankSum=5.432;VQSLOD=1.6850;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:33,0:33:8.74:64,9,0	1/1:0,4:4:3.01:67,3,0	0/0:21,0:16:47.45:0,47,561	0/0:26,0:20:22.42:0,22,528	0/0:10,0:10:24.03:0,24,282	0/0:8,0:20:25.05:0,25,174	0/0:6,0:14:11.96:0,12,96	0/0:8,0:8:24.04:0,24,268	0/0:14,0:17:38.59:0,39,395	0/0:15,0:15:38.94:0,39,389	0/0:13,0:13:35.86:0,36,422	1/1:11,11:22:29.93:537,30,0	1/1:8,0:10:18.53:298,19,0	0/0:18,0:18:45.03:0,45,557	1/1:10,11:21:30.10:582,30,0	1/1:10,8:20:29.99:508,30,0	0/0:26,0:26:72.44:0,72,895	1/1:9,9:18:33.06:637,33,0	0/0:14,0:13:36.08:0,36,520	0/0:20,0:20:50.92:0,51,641	0/0:18,0:18:53.91:0,54,688	1/1:14,8:22:26.97:447,27,0	1/1:4,8:12:8.92:142,9,0	1/1:22,0:19:31.97:532,32,0	0/0:12,0:12:33.07:0,33,443	0/0:19,0:18:48.45:0,48,560	0/0:10,0:9:25.19:0,25,217	0/0:10,0:10:26.96:0,27,273
chr10	51405694	.	C	CCA	1287.53	PASS	AB=0.811;AC=18;AF=0.321;AN=56;BaseQRankSum=9.551;DP=497;FS=21.838;HRun=0;HaplotypeScore=102.2952;InbreedingCoeff=0.7550;MQ=61.75;MQ0=17;MQRankSum=-4.540;QD=7.19;ReadPosRankSum=6.501;VQSLOD=1.0663;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:30:3.88:4,0,19	1/1:3,0:3:3:25,3,0	0/0:21,0:16:44.70:0,45,500	0/0:23,0:17:22.86:0,23,420	0/0:13,0:13:30.02:0,30,313	0/0:19,0:18:14.79:0,15,83	0/0:16,0:14:12.41:0,12,90	0/0:9,0:9:26.92:0,27,253	0/0:19,0:18:42.46:0,42,417	0/0:15,0:15:30.44:0,30,313	0/0:16,0:15:24.02:0,24,300	1/1:13,7:22:10.42:180,10,0	1/1:8,2:12:16.32:166,16,0	0/0:18,0:18:45.02:0,45,498	1/1:12,7:19:28.32:229,28,0	1/1:11,8:20:3.88:199,4,0	0/0:27,0:27:69.54:0,70,799	1/1:10,5:17:24.53:209,25,0	0/0:15,0:12:33.09:0,33,456	0/0:20,0:20:47.74:0,48,569	0/0:27,0:25:55.12:0,55,621	0/1:9,11:23:13.05:161,0,13	1/1:7,4:11:5.90:70,6,0	1/1:12,7:17:6.66:233,7,0	0/0:13,0:13:39.04:0,39,451	0/0:26,0:24:44.06:0,44,489	0/0:9,0:8:26.77:0,27,203	0/0:12,0:11:26.96:0,27,259
chr10	51405700	.	CGT	C	65.41	PASS	AB=1.000;AC=4;AF=0.083;AN=48;BaseQRankSum=-0.513;DP=545;FS=0.000;HRun=0;HaplotypeScore=115.1630;InbreedingCoeff=0.1648;MQ=54.04;MQ0=23;MQRankSum=2.748;QD=0.85;ReadPosRankSum=1.740;VQSLOD=1.7603;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:24.49:0,24,241	./.	./.	./.	0/0:12,0:12:9.02:0,9,112	0/0:25,0:23:2.99:0,3,25	0/0:19,0:16:3:0,3,27	0/0:11,0:10:0:0,0,0	0/0:18,0:16:3.01:0,3,42	0/0:14,0:14:9.50:0,10,132	0/0:14,0:13:12.04:0,12,164	0/0:31,0:33:15:0,15,134	0/0:18,0:17:5.98:0,6,63	0/0:16,0:19:3:0,3,26	0/0:27,0:27:9.01:0,9,96	0/0:19,0:20:6.01:0,6,67	1/1:17,9:28:14.87:144,15,0	0/0:24,0:24:26.75:0,27,271	./.	0/0:14,0:14:3.01:0,3,45	0/1:30,0:27:11.70:12,0,148	0/0:29,0:29:5.98:0,6,66	0/0:13,0:12:2.99:0,3,41	0/0:16,0:21:5.93:0,6,35	0/1:19,0:19:11.35:11,0,203	0/0:23,0:21:19.28:0,19,222	0/0:11,0:10:9.03:0,9,126	0/0:10,0:9:6.01:0,6,65
chr10	51408511	.	ACAGCAG	A	2217.68	PASS	AC=12;AF=0.500;AN=24;BaseQRankSum=5.986;DP=516;FS=3.378;HRun=0;HaplotypeScore=117.6167;InbreedingCoeff=0.8368;MQ=79.70;MQ0=5;MQRankSum=-9.075;QD=19.63;ReadPosRankSum=-0.796;VQSLOD=3.3596;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	1/1:1,1:2:3.01:60,3,0	./.	./.	./.	./.	./.	./.	0/0:27,0:28:9.23:0,9,1297	./.	./.	1/1:13,14:27:33.11:662,33,0	1/1:16,8:24:30.10:601,30,0	0/0:29,0:31:72:0,72,1811	1/1:16,0:25:27.09:377,27,0	1/1:7,10:18:27.09:523,27,0	0/0:36,0:36:54.19:0,54,1655	1/1:12,5:17:6.02:120,6,0	./.	./.	./.	./.	./.	0/0:17,0:43:58.84:0,59,372	./.	./.	0/0:20,0:19:36.08:0,36,1028	0/0:4,0:4:3.01:0,3,95
chr10	51408536	.	CA	C	175.68	PASS	AC=6;AF=0.125;AN=48;BaseQRankSum=2.752;DP=428;FS=5.106;HRun=1;HaplotypeScore=66.2043;InbreedingCoeff=0.6929;MQ=54.60;MQ0=40;MQRankSum=0.755;QD=7.03;ReadPosRankSum=-3.542;VQSLOD=-0.5906;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,5:5:6.02:83,6,0	0/0:1,0:1:0.89:0,1,2	0/0:14,0:7:18.06:0,18,244	0/0:24,0:14:24.72:0,25,347	./.	1/1:2,5:5:6.02:83,6,0	1/1:2,10:11:8.95:124,9,0	0/0:10,0:5:12.04:0,12,172	0/0:30,0:30:87.16:0,87,1313	0/0:8,0:3:7.26:0,7,73	./.	0/0:21,0:21:27.79:0,28,260	0/0:29,0:29:63.04:0,63,785	0/0:36,0:36:99:0,101,1439	0/0:21,0:21:28.94:0,29,426	0/0:22,0:22:37.02:0,37,425	0/0:42,0:42:99:0,126,1806	0/0:18,0:18:34.11:0,34,491	0/0:11,0:8:23.95:0,24,263	./.	0/0:15,0:13:27.09:0,27,381	0/0:2,0:2:3.01:0,3,43	./.	0/0:41,0:41:68.83:0,69,605	0/0:12,0:8:12.04:0,12,171	0/0:9,0:2:3.01:0,3,43	0/0:22,0:21:66.18:0,66,970	0/0:4,0:4:9.03:0,9,133
chr10	51408808	.	AG	A	6777.87	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=15.494;DP=564;FS=1.087;HRun=1;HaplotypeScore=73.9832;InbreedingCoeff=0.9994;MQ=76.14;MQ0=0;MQRankSum=-0.027;QD=38.08;ReadPosRankSum=3.722;VQSLOD=5.5122;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,114,1653	1/1:0,9:9:27.09:376,27,0	0/0:17,0:16:48.02:0,48,675	0/0:15,0:15:37.69:0,38,499	0/0:9,0:9:27.06:0,27,370	0/0:14,0:14:39.13:0,39,583	0/0:24,0:24:72.23:0,72,1079	0/0:20,0:20:59.92:0,60,816	0/0:35,0:35:99:0,102,1497	0/0:17,0:17:48.14:0,48,679	0/0:12,0:12:36.12:0,36,521	1/1:0,22:22:63.21:876,63,0	1/1:0,33:33:93.31:1293,93,0	0/0:16,0:16:48.16:0,48,734	1/1:0,21:21:54.18:755,54,0	1/1:0,17:17:45.15:629,45,0	0/0:30,1:31:51.36:0,51,1283	1/1:0,27:27:72.24:1006,72,0	0/0:26,0:26:78.22:0,78,1124	0/0:17,0:17:48.12:0,48,665	0/0:25,0:25:72.20:0,72,1037	1/1:0,17:17:45.15:629,45,0	1/1:0,11:11:33.11:461,33,0	1/1:0,21:21:54.18:753,54,0	0/0:16,0:16:48.16:0,48,733	0/0:21,0:21:60.15:0,60,857	0/0:24,0:24:72.17:0,72,1053	0/0:9,0:9:27.05:0,27,368
chr10	51409629	.	T	TC	10194.56	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-13.250;DP=641;FS=10.322;HRun=2;HaplotypeScore=65.6056;InbreedingCoeff=0.9999;MQ=96.99;MQ0=0;MQRankSum=-7.795;QD=37.34;ReadPosRankSum=3.401;VQSLOD=5.0546;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,27:30:69.23:990,69,0	1/1:0,11:11:30.10:432,30,0	0/0:25,0:25:71.48:0,71,837	0/0:38,0:38:92.16:0,92,1174	0/0:21,0:21:60.17:0,60,730	1/1:2,20:22:60.19:846,60,0	1/1:2,18:20:51.17:735,51,0	0/0:43,0:43:99:0,124,1490	0/0:17,0:17:51.16:0,51,632	0/0:16,0:16:45.14:0,45,558	0/0:17,0:17:48.15:0,48,595	1/1:0,26:26:66.22:951,66,0	1/1:0,29:29:87.29:1253,87,0	0/0:24,0:24:63.20:0,63,781	1/1:0,23:23:57.19:818,57,0	1/1:1,14:15:33.11:475,33,0	0/0:25,0:25:69.20:0,69,842	1/1:1,19:20:51.16:716,51,0	0/0:17,0:17:51.15:0,51,620	0/0:17,0:17:45.14:0,45,557	0/0:24,0:24:72.21:0,72,879	1/1:0,28:28:78.26:1122,78,0	1/1:0,18:18:48.05:691,48,0	1/1:1,30:31:81.27:1166,81,0	0/0:20,0:20:57.18:0,57,706	0/0:21,0:21:57.18:0,57,706	0/0:25,0:25:72.23:0,72,892	0/0:18,0:18:53.31:0,53,595
chr10	51412905	.	CAA	C	4078.37	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=14.036;DP=687;FS=9.555;HRun=11;HaplotypeScore=121.4328;InbreedingCoeff=0.9857;MQ=78.08;MQ0=1;MQRankSum=-0.030;QD=22.53;ReadPosRankSum=4.575;VQSLOD=2.0876;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:2,0:30:63.80:0,64,257	1/1:1,5:6:12.03:128,12,0	0/0:27,1:27:9.51:0,10,396	0/0:19,0:19:19.47:0,19,322	0/0:31,1:32:84.27:0,84,1272	0/0:6,1:30:29.50:0,29,239	0/0:5,0:21:37.43:0,37,128	0/0:35,0:35:96.33:0,96,1477	0/0:20,0:20:57.18:0,57,855	0/0:30,0:31:84.27:0,84,1255	0/0:24,0:29:73.31:0,73,1006	1/1:4,17:21:45.11:479,45,0	1/1:5,12:17:30.05:319,30,0	0/0:23,0:26:68.69:0,69,967	1/1:9,29:38:75.15:798,75,0	1/1:1,18:19:51.12:543,51,0	0/0:27,0:27:75.24:0,75,1134	1/1:4,14:18:39.08:415,39,0	0/0:18,0:20:56.16:0,56,801	0/0:29,0:30:87.24:0,87,1248	0/0:13,0:13:39.13:0,39,599	1/1:7,17:25:38.93:470,39,0	1/1:5,19:24:57.12:607,57,0	1/1:1,12:13:30.06:319,30,0	0/0:34,0:39:95.29:0,95,1368	0/0:29,0:32:89.76:0,90,1255	0/0:24,0:25:65.71:0,66,977	0/0:12,0:17:40.57:0,41,475
chr10	51414277	.	CT	C	6072.64	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=15.293;DP=733;FS=15.106;HRun=6;HaplotypeScore=76.7446;InbreedingCoeff=0.9998;MQ=83.56;MQ0=0;MQRankSum=-3.085;QD=29.34;ReadPosRankSum=3.560;VQSLOD=4.0471;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,102,1340	1/1:1,9:10:27.07:289,27,0	0/0:20,0:20:52.67:0,53,603	0/0:27,0:27:52.37:0,52,668	0/0:41,0:41:99:0,114,1482	0/0:20,0:20:57.17:0,57,734	0/0:23,0:23:66.21:0,66,868	0/0:34,0:34:93.28:0,93,1197	0/0:27,0:27:75.24:0,75,984	0/0:32,0:32:90.25:0,90,1144	0/0:25,0:25:72.22:0,72,934	1/1:0,33:33:90.22:962,90,0	1/1:2,23:25:69.17:739,69,0	0/0:33,0:33:87.28:0,87,1143	1/1:2,23:25:69.17:738,69,0	1/1:0,28:28:81.20:867,81,0	0/0:29,0:29:84.27:0,84,1103	1/1:0,15:15:45.11:483,45,0	0/0:14,0:14:33.11:0,33,431	0/0:28,0:28:75.24:0,75,985	0/0:25,0:25:69.19:0,69,878	1/1:0,18:18:54.13:576,54,0	1/1:2,20:22:60.15:644,60,0	1/1:4,27:31:72.18:774,72,0	0/0:23,0:23:66.21:0,66,867	0/0:30,0:30:90.25:0,90,1130	0/0:44,0:44:99:0,129,1691	0/0:14,0:14:42.14:0,42,553
chr10	51414360	.	T	TA	4900.43	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=17.160;DP=668;FS=0.740;HRun=2;HaplotypeScore=115.5710;InbreedingCoeff=0.9969;MQ=87.18;MQ0=0;MQRankSum=-17.140;QD=30.63;ReadPosRankSum=1.738;VQSLOD=4.5346;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,132,1619	1/1:2,5:7:15.05:194,15,0	0/0:30,0:30:81.23:0,81,981	0/0:23,0:23:63.15:0,63,741	0/0:23,0:23:69.20:0,69,842	0/0:20,0:20:54.15:0,54,656	0/0:35,0:35:99:0,102,1236	0/0:33,0:33:87.26:0,87,1057	0/0:38,0:39:99:0,114,1370	0/0:31,0:31:93.29:0,93,1153	0/0:15,0:15:42.13:0,42,520	1/1:3,22:26:63.20:807,63,0	1/1:3,17:20:54.13:669,54,0	0/0:20,0:20:60.19:0,60,743	1/1:2,18:20:57.17:719,57,0	1/1:6,21:27:63.21:823,63,0	0/0:34,0:34:99:0,99,1212	1/1:7,6:13:24.08:325,24,0	0/0:20,0:20:54.17:0,54,669	0/0:25,0:25:72.21:0,72,880	0/0:26,0:26:72.23:0,72,892	1/1:2,19:21:54.13:669,54,0	1/1:1,10:11:30.05:357,30,0	1/1:3,12:15:27.09:338,27,0	0/0:19,0:19:57.18:0,57,706	0/0:32,0:32:96.29:0,96,1179	0/0:29,0:29:78.24:0,78,967	0/0:10,0:10:30.09:0,30,372
chr10	51414365	.	TGGG	T	6970.58	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=17.250;DP=643;FS=1.568;HRun=3;HaplotypeScore=129.3075;InbreedingCoeff=0.9979;MQ=87.45;MQ0=0;MQRankSum=-17.053;QD=50.88;ReadPosRankSum=1.640;VQSLOD=4.5418;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,135,3261	1/1:1,5:6:18.06:319,18,0	0/0:27,0:28:81.27:0,81,1859	0/0:22,0:22:66.23:0,66,1552	0/0:22,0:22:66.23:0,66,1625	0/0:21,0:21:63.22:0,63,1552	0/0:35,0:35:99:0,105,2499	0/0:34,0:34:99:0,99,2387	0/0:39,0:39:99:0,117,2827	0/0:31,0:31:93.32:0,93,2250	0/0:17,0:17:48.15:0,48,1112	1/1:2,23:25:72.25:1269,72,0	1/1:0,17:17:51.17:893,51,0	0/0:19,0:19:57.20:0,57,1381	1/1:0,18:18:54.18:949,54,0	1/1:2,21:23:69.24:1215,69,0	0/0:32,0:32:96.31:0,96,2317	1/1:0,7:7:21.07:383,21,0	0/0:20,0:20:60.20:0,60,1437	0/0:26,0:26:78.26:0,78,1882	0/0:28,0:28:84.27:0,84,1993	1/1:0,19:19:54.18:939,54,0	1/1:0,10:10:30.10:517,30,0	1/1:0,12:12:30.04:487,30,0	0/0:19,0:19:57.20:0,57,1408	0/0:30,0:30:90.30:0,90,2172	0/0:25,0:25:75.22:0,75,1749	0/0:13,0:13:39.13:0,39,929
chr10	51415825	.	CGT	C	78.17	PASS	AB=0.753;AC=2;AF=0.036;AN=56;BaseQRankSum=4.151;DP=731;FS=11.602;HRun=0;HaplotypeScore=101.8730;InbreedingCoeff=-0.0372;MQ=72.20;MQ0=0;MQRankSum=4.823;QD=3.91;ReadPosRankSum=-2.616;VQSLOD=1.2402;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:75.26:0,75,1522	0/0:12,0:12:33.11:0,33,670	0/1:6,5:12:99:100,0,147	0/1:6,2:8:67.05:67,0,184	0/0:22,0:22:66.22:0,66,1310	0/0:24,0:24:72.23:0,72,1425	0/0:30,0:30:90.29:0,90,1791	0/0:30,0:30:87.29:0,87,1708	0/0:24,0:24:72.25:0,72,1461	0/0:30,0:30:87.26:0,87,1681	0/0:32,0:32:96.30:0,96,1910	0/0:32,0:32:96.33:0,96,1934	0/0:39,0:39:99:0,117,2253	0/0:34,0:34:99:0,99,1921	0/0:41,0:41:99:0,120,2394	0/0:37,0:37:99:0,111,2203	0/0:18,0:18:54.19:0,54,1096	0/0:22,0:22:66.23:0,66,1340	0/0:28,0:28:84.29:0,84,1697	0/0:27,0:27:78.27:0,78,1572	0/0:38,0:38:99:0,114,2301	0/0:28,0:28:84.29:0,84,1679	0/0:25,0:25:75.26:0,75,1510	0/0:13,0:13:39.13:0,39,792	0/0:21,0:21:63.19:0,63,1241	0/0:45,0:45:99:0,135,2666	0/0:27,0:27:78.27:0,78,1581	0/0:7,0:7:21.05:0,21,388
chr10	51416731	.	C	CT	16319.37	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-17.669;DP=802;FS=0.846;HRun=0;HaplotypeScore=76.0276;InbreedingCoeff=0.9995;MQ=72.10;MQ0=0;MQRankSum=-2.325;QD=42.72;ReadPosRankSum=3.344;VQSLOD=5.4561;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,46:46:99:1959,123,0	1/1:0,12:12:36.12:575,36,0	0/0:13,0:13:33.08:0,33,420	0/0:11,0:10:29.38:0,29,350	0/0:18,0:18:54.12:0,54,714	1/1:0,19:19:48.16:767,48,0	1/1:0,30:30:78.27:1236,78,0	0/0:37,0:37:90.25:0,90,1214	0/0:38,0:38:99:0,108,1491	0/0:27,0:27:75.24:0,75,1024	0/0:10,0:10:24.04:0,24,298	1/1:1,40:41:99:1715,108,0	1/1:0,39:39:99:1581,99,0	0/0:36,0:36:99:0,105,1466	1/1:1,39:40:99:1678,105,0	1/1:1,29:30:84.29:1342,84,0	0/0:28,0:28:84.26:0,84,1156	1/1:0,30:30:81.28:1295,81,0	0/0:16,0:16:45.15:0,45,624	0/0:27,0:27:69.22:0,69,946	0/0:50,0:50:99:0,141,1906	1/1:0,32:32:87.30:1390,87,0	1/1:0,17:17:48.16:767,48,0	1/1:0,45:45:99:2014,126,0	0/0:25,0:25:75.20:0,75,1009	0/0:28,0:28:75.72:0,76,1042	0/0:42,0:42:99:0,123,1715	0/0:14,0:14:30.10:0,30,419
chr10	51417949	.	T	TAA	3947.28	PASS	AB=0.600;AC=23;AF=0.411;AN=56;BaseQRankSum=-2.205;DP=586;FS=1.309;HRun=11;HaplotypeScore=82.2914;InbreedingCoeff=0.9269;MQ=71.37;MQ0=3;MQRankSum=-0.971;QD=20.35;ReadPosRankSum=0.259;VQSLOD=3.0835;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,3:20:36.07:380,36,0	1/1:3,5:8:9.95:133,10,0	0/0:26,0:17:22.13:0,22,197	0/0:21,0:11:14.78:0,15,111	0/0:32,0:32:84.08:0,84,808	0/1:6,1:18:5.62:80,0,6	1/1:1,0:11:25.30:91,25,0	0/0:21,0:22:47.76:0,48,443	0/0:27,0:30:65.45:0,65,599	0/0:29,0:29:62.99:0,63,604	0/0:24,0:25:62.75:0,63,583	1/1:7,9:17:18.06:261,18,0	1/1:5,9:18:30.81:364,31,0	0/0:22,0:22:48:0,48,459	1/1:4,12:16:23.57:313,24,0	1/1:2,13:15:27.09:390,27,0	0/0:30,0:30:72.06:0,72,698	1/1:0,21:23:53.45:716,53,0	0/0:30,0:31:71.99:0,72,747	0/0:31,0:33:70.60:0,71,638	0/0:7,0:7:17.99:0,18,163	1/1:5,10:15:30.10:429,30,0	1/1:2,19:22:41.63:574,42,0	1/1:2,7:10:15.05:217,15,0	0/0:30,0:30:78.08:0,78,751	0/0:24,0:25:35.84:0,36,399	0/0:17,0:20:31.17:0,31,400	0/0:9,0:9:24.02:0,24,233
chr10	51418496	.	G	GCT	13900.83	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-14.931;DP=724;FS=2.836;HRun=0;HaplotypeScore=78.1572;InbreedingCoeff=0.9963;MQ=86.62;MQ0=1;MQRankSum=-1.766;QD=44.84;ReadPosRankSum=3.631;VQSLOD=6.3044;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,30:34:87.30:1567,87,0	1/1:0,20:19:51.17:918,51,0	0/0:34,0:34:84.27:0,84,1162	0/0:16,0:16:42.14:0,42,578	0/0:24,0:24:69.23:0,69,964	1/1:3,17:20:51.17:918,51,0	1/1:1,12:13:33.11:593,33,0	0/0:27,0:27:75.17:0,75,935	0/0:26,0:26:69.21:0,69,947	0/0:36,0:36:99:0,99,1357	0/0:23,0:23:69.20:0,69,928	1/1:3,24:28:63.22:1135,63,0	1/1:3,26:29:75.26:1350,75,0	0/0:35,0:35:99:0,105,1451	1/1:0,45:45:99:2161,120,0	1/1:6,34:40:13.08:1538,13,0	0/0:15,0:15:33.07:0,33,424	1/1:2,16:18:35.07:695,35,0	0/0:14,0:14:42.14:0,42,575	0/0:29,0:29:75.24:0,75,1033	0/0:25,0:25:72.22:0,72,990	1/1:1,23:24:66.23:1188,66,0	1/1:0,19:19:48.16:864,48,0	1/1:0,20:20:54.19:972,54,0	0/0:37,0:37:99:0,111,1554	0/0:36,0:36:99:0,99,1357	0/0:28,0:28:78.26:0,78,1091	0/0:9,0:9:27.09:0,27,378
chr10	51419852	.	GAGC	G	6642.11	PASS	AB=0.900;AC=26;AF=0.464;AN=56;BaseQRankSum=10.845;DP=651;FS=3.011;HRun=0;HaplotypeScore=91.0567;InbreedingCoeff=0.7519;MQ=63.85;MQ0=3;MQRankSum=1.089;QD=18.15;ReadPosRankSum=2.420;VQSLOD=4.8139;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:21,14:35:9.03:125,9,0	1/1:4,14:18:35.81:501,36,0	0/0:13,0:9:18.75:0,19,253	0/1:15,1:15:68.93:69,0,217	0/0:11,0:11:3.01:0,3,60	1/1:8,10:18:24.08:334,24,0	1/1:8,22:30:53.21:717,53,0	0/0:13,0:13:15.03:0,15,224	0/0:31,0:31:63.18:0,63,1173	0/0:18,0:18:15.04:0,15,253	0/0:10,0:10:5.05:0,5,57	1/1:15,33:48:84.28:1169,84,0	1/1:13,14:28:36.04:481,36,0	0/0:32,0:31:75.22:0,75,1388	1/1:9,20:30:48.11:646,48,0	1/1:5,17:22:39.13:543,39,0	0/0:21,0:21:42.14:0,42,809	1/1:8,20:28:51.17:711,51,0	0/0:18,0:16:6.02:0,6,110	0/0:11,0:11:18.05:0,18,311	0/0:63,0:63:93.26:0,93,1697	1/1:8,4:12:9.03:125,9,0	1/1:15,0:14:3.01:42,3,0	1/1:11,35:46:81.20:1128,81,0	0/0:12,0:12:15.05:0,15,299	0/0:23,0:23:21.06:0,21,344	0/1:16,2:18:50.49:50,0,505	0/0:9,0:9:27.04:0,27,496
chr10	51421104	.	C	CT	4371.25	PASS	AB=0.553;AC=21;AF=0.375;AN=56;BaseQRankSum=-11.992;DP=612;FS=7.013;HRun=10;HaplotypeScore=61.7697;InbreedingCoeff=0.9119;MQ=72.50;MQ0=0;MQRankSum=0.784;QD=21.53;ReadPosRankSum=0.333;VQSLOD=5.7561;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:40:99:0,107,868	1/1:2,8:10:18.05:192,18,0	0/0:15,0:15:26.85:0,27,210	0/0:12,0:11:4.58:0,5,30	0/0:38,0:38:71.28:0,71,725	1/1:2,13:15:23.29:397,23,0	1/1:3,8:11:18.05:192,18,0	0/0:27,1:29:35.91:0,36,489	0/0:18,0:18:44.93:0,45,366	0/0:32,0:33:91.13:0,91,724	0/0:15,0:15:38.95:0,39,320	1/1:2,12:15:35.92:366,36,0	1/1:6,22:28:44.48:667,44,0	0/0:22,0:24:55.90:0,56,443	1/1:7,25:32:38.51:615,39,0	1/1:5,17:23:23.31:438,23,0	0/0:25,0:25:68.91:0,69,567	1/1:3,16:19:20.54:423,21,0	0/0:25,1:27:29.81:0,30,429	0/0:26,0:26:51.86:0,52,543	0/0:12,0:12:32.96:0,33,271	1/1:3,14:17:39.10:416,39,0	0/1:4,17:21:4.12:370,0,4	1/1:2,10:12:8.52:295,9,0	0/0:35,0:35:92.66:0,93,748	0/0:23,0:23:53.93:0,54,443	0/0:27,0:27:62.89:0,63,514	0/0:10,0:10:20.96:0,21,172
chr10	51421968	.	A	AGTGTGT	1986.32	PASS	AC=20;AF=0.370;AN=54;BaseQRankSum=-2.129;DP=698;FS=1.716;HRun=0;HaplotypeScore=172.8429;InbreedingCoeff=0.8090;MQ=62.07;MQ0=13;MQRankSum=-5.689;QD=7.76;ReadPosRankSum=-1.316;VQSLOD=2.5939;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:23,5:30:3.48:39,3,0	1/1:7,4:11:6.02:193,6,0	1/1:42,0:24:0.47:1,0,0	./.	0/0:22,0:22:21.05:0,21,390	0/0:20,0:36:42.09:0,42,547	0/0:17,0:25:23.52:0,24,302	0/0:38,0:38:20.30:0,20,342	0/0:15,0:16:30.10:0,30,590	0/0:21,0:21:19.89:0,20,416	0/0:12,0:12:18.06:0,18,366	1/1:12,5:18:9.03:232,9,0	1/1:15,9:26:21.07:594,21,0	0/0:17,0:17:27.04:0,27,438	1/1:14,8:25:6.49:194,6,0	1/1:10,10:22:14.82:308,15,0	0/0:29,0:32:45.11:0,45,792	1/1:13,6:21:12.03:318,12,0	0/0:21,0:19:9.03:0,9,164	0/0:14,0:17:24.05:0,24,378	0/0:41,0:43:42.11:0,42,772	1/1:18,10:31:3.01:97,3,0	0/0:17,7:30:0.46:0,0,1	1/1:16,10:29:5.40:192,5,0	0/0:21,0:21:27.08:0,27,491	0/0:21,0:24:36.11:0,36,643	0/0:24,0:27:55.07:0,55,1045	0/0:17,0:16:12.02:0,12,207
chr10	51422564	.	G	GGT	3664.76	PASS	AB=0.606;AC=21;AF=0.375;AN=56;BaseQRankSum=-9.031;DP=699;FS=0.969;HRun=0;HaplotypeScore=99.6209;InbreedingCoeff=0.8521;MQ=63.63;MQ0=13;MQRankSum=2.477;QD=17.29;ReadPosRankSum=1.547;VQSLOD=3.8163;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:78.22:0,78,926	1/1:2,5:8:9.01:144,9,0	0/0:34,0:13:17.89:0,18,162	0/0:33,0:15:2.97:0,3,21	0/0:27,0:27:69.21:0,69,821	1/1:16,0:17:8.93:84,9,0	1/1:25,0:24:8.90:66,9,0	0/0:30,0:30:54.16:0,54,642	0/0:27,0:27:63.19:0,63,745	0/0:30,0:30:65.94:0,66,733	0/0:18,0:19:35.94:0,36,407	1/1:10,8:17:15.05:239,15,0	1/1:4,11:15:21.06:323,21,0	0/0:27,0:27:63.16:0,63,731	1/1:4,19:25:45.15:717,45,0	1/1:4,14:17:33.11:525,33,0	0/0:29,0:29:63.16:0,63,750	1/1:4,6:10:6.02:96,6,0	0/0:11,0:13:17.27:0,17,186	0/0:24,0:24:48.14:0,48,567	0/0:56,0:56:96.25:0,96,1117	1/1:6,18:23:35.10:534,35,0	0/1:6,11:20:18.73:316,0,19	1/1:10,18:30:39.13:621,39,0	0/0:19,0:19:54:0,54,621	0/0:30,0:31:50.99:0,51,582	0/0:29,0:33:83.90:0,84,944	0/0:13,0:15:30.23:0,30,315
chr10	51426660	.	AG	A	3831.14	PASS	AB=0.869;AC=29;AF=0.518;AN=56;BaseQRankSum=5.697;DP=609;FS=13.766;HRun=11;HaplotypeScore=77.3183;InbreedingCoeff=0.2858;MQ=71.55;MQ0=0;MQRankSum=-0.298;QD=8.95;ReadPosRankSum=6.523;VQSLOD=0.6933;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,1:37:10.80:0,11,240	0/1:3,5:8:1.34:105,0,1	0/0:24,0:20:15.31:0,15,218	0/1:16,0:15:23.21:23,0,117	0/1:16,2:18:19.06:19,0,211	1/1:3,0:21:34.40:100,34,0	1/1:1,0:20:34.63:100,35,0	0/0:14,0:14:14.96:0,15,133	0/1:23,4:27:17.03:17,0,409	0/0:21,0:21:8.51:0,9,285	0/0:16,0:16:18.02:0,18,178	1/1:10,23:34:29.97:442,30,0	1/1:2,17:20:20.87:358,21,0	0/0:15,1:16:2.40:0,2,222	1/1:11,20:32:47.10:456,47,0	1/1:7,15:26:30.28:410,30,0	0/0:24,2:26:7.85:0,8,486	1/1:9,24:36:77.05:590,77,0	0/1:15,3:19:25.17:25,0,162	0/0:23,0:23:3.83:0,4,110	0/1:15,2:17:22.92:23,0,133	1/1:9,17:25:41.76:323,42,0	1/1:5,12:17:35.96:295,36,0	1/1:5,20:26:55.96:449,56,0	0/1:13,2:15:28.21:28,0,139	0/1:27,4:31:53.82:54,0,396	0/1:17,2:19:13.21:13,0,251	0/0:4,0:4:3:0,3,25
chr10	51438294	.	AG	A	1206.36	PASS	AC=38;AF=1.000;AN=38;DP=60;FS=0.000;HRun=7;HaplotypeScore=13.2934;InbreedingCoeff=-0.1108;MQ=26.61;MQ0=9;QD=21.54;VQSLOD=1.3842;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,3:3:9.02:92,9,0	1/1:0,2:2:6.01:61,6,0	./.	./.	1/1:0,3:3:6.01:61,6,0	1/1:0,2:2:6.01:61,6,0	1/1:0,2:2:6.01:60,6,0	1/1:1,3:3:9.02:92,9,0	1/1:2,1:1:3.01:30,3,0	1/1:1,4:4:12.03:122,12,0	./.	1/1:0,2:2:6.01:61,6,0	1/1:0,4:4:9.02:92,9,0	./.	1/1:1,1:1:3.01:30,3,0	1/1:1,2:2:6.01:61,6,0	1/1:0,1:1:3.01:31,3,0	./.	1/1:1,5:6:15.03:152,15,0	1/1:1,3:3:9.02:92,9,0	./.	./.	1/1:1,3:4:9.02:92,9,0	./.	1/1:1,1:1:3.01:31,3,0	./.	1/1:0,3:3:3.01:31,3,0	1/1:0,1:1:3.01:31,3,0
chr10	51438379	.	TA	T	523.99	PASS	AB=0.825;AC=17;AF=0.315;AN=54;BaseQRankSum=-0.441;DP=302;FS=0.000;HRun=15;HaplotypeScore=41.1598;InbreedingCoeff=0.4325;MQ=54.17;MQ0=12;MQRankSum=3.520;QD=4.64;ReadPosRankSum=2.305;VQSLOD=0.4024;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:11.08:0,11,50	1/1:2,6:8:17.71:115,18,0	0/1:21,0:7:9.23:9,0,15	0/0:16,0:4:2.80:0,3,13	0/0:14,1:15:4.61:0,5,153	0/0:9,0:10:12.33:0,12,89	0/1:8,0:9:0.90:1,0,55	0/0:14,0:15:27.68:0,28,218	0/0:7,0:7:5.96:0,6,45	0/0:12,0:13:11.76:0,12,79	0/0:10,0:11:14.75:0,15,115	1/1:2,3:5:5.89:38,6,0	0/1:4,5:9:10.02:65,0,10	0/0:11,0:11:15.84:0,16,126	1/1:6,10:15:20.54:134,21,0	0/1:5,6:11:11.58:62,0,12	0/1:8,2:10:19.59:20,0,82	1/1:2,8:10:23.65:154,24,0	0/0:8,0:8:14.60:0,15,90	0/0:12,1:15:4.48:0,4,138	0/0:5,0:4:6:0,6,53	./.	1/1:8,4:12:10.18:77,10,0	1/1:0,1:1:2.96:19,3,0	0/0:10,0:10:8.75:0,9,52	0/0:18,0:19:28.52:0,29,235	0/0:9,1:10:18:0,18,158	0/0:3,0:3:5.97:0,6,46
chr10	51438393	.	AAG	A	282.48	PASS	AB=0.977;AC=6;AF=0.107;AN=56;BaseQRankSum=-0.434;DP=326;FS=19.487;HRun=0;HaplotypeScore=48.9503;InbreedingCoeff=0.3009;MQ=66.54;MQ0=2;MQRankSum=-0.990;QD=4.71;ReadPosRankSum=-1.319;VQSLOD=0.2071;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,3:17:26.90:240,27,0	0/0:6,0:6:17.62:0,18,105	0/0:25,0:10:14.96:0,15,118	0/0:19,0:10:12.92:0,13,88	0/0:15,0:15:36.01:0,36,435	0/1:11,0:11:8.51:42,0,9	0/1:12,0:12:2.43:102,0,2	0/0:25,0:25:47.96:0,48,499	0/0:9,0:9:12:0,12,120	0/0:11,0:11:24.02:0,24,242	0/1:9,1:10:17.05:17,0,157	0/0:4,0:4:8.85:0,9,59	0/1:10,0:10:4.47:4,0,147	0/0:12,0:12:18.03:0,18,229	0/0:17,0:17:35.36:0,35,235	0/0:9,0:9:20.53:0,21,164	0/0:10,0:10:17.72:0,18,183	0/0:12,0:12:32.27:0,32,205	0/0:8,0:7:12.03:0,12,135	0/0:12,0:12:17.99:0,18,235	0/0:8,0:7:11.95:0,12,112	0/0:6,0:5:8.99:0,9,74	0/0:12,0:11:26.41:0,26,175	0/0:1,0:1:2.94:0,3,18	0/0:9,0:9:9:0,9,83	0/0:20,0:20:36.07:0,36,473	0/0:13,0:13:30.06:0,30,383	0/0:2,0:2:3.01:0,3,46
chr10	51439335	.	TG	T	2137.70	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=10.523;DP=603;FS=6.222;HRun=5;HaplotypeScore=58.7644;InbreedingCoeff=0.9981;MQ=89.70;MQ0=0;MQRankSum=-3.169;QD=26.39;ReadPosRankSum=1.310;VQSLOD=3.4037;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,49:52:99:1429,126,0	0/0:11,0:11:33.11:0,33,451	0/0:21,0:21:54.18:0,54,733	0/0:23,0:24:57.17:0,57,750	0/0:31,0:31:90.23:0,90,1150	1/1:1,9:10:21.06:238,21,0	1/1:1,18:19:54.15:613,54,0	0/0:22,0:22:60.19:0,60,808	0/0:18,0:18:54.18:0,54,736	0/0:13,0:13:39.11:0,39,506	0/0:15,0:15:42.14:0,42,574	0/0:19,0:19:57.15:0,57,758	0/0:18,0:18:48.13:0,48,621	0/0:27,0:27:78.25:0,78,1050	0/0:21,0:21:57.18:0,57,764	0/0:18,0:18:51.16:0,51,682	0/0:29,0:29:84.28:0,84,1148	0/0:24,0:24:63.20:0,63,845	0/0:29,0:29:81.24:0,81,1076	0/0:19,0:19:51.17:0,51,696	0/0:41,0:41:99:0,117,1583	0/0:21,0:21:60.20:0,60,821	0/0:16,0:16:48.16:0,48,652	0/0:25,0:25:69.23:0,69,944	0/0:10,0:10:30.08:0,30,393	0/0:25,0:25:66.20:0,66,875	0/0:14,0:14:42.14:0,42,574	0/0:11,0:11:33.11:0,33,451
chr10	51440311	.	CT	C	3001.86	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=10.918;DP=757;FS=2.674;HRun=1;HaplotypeScore=70.1687;InbreedingCoeff=0.9996;MQ=76.29;MQ0=0;MQRankSum=-3.540;QD=34.50;ReadPosRankSum=2.164;VQSLOD=3.7710;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,43:43:99:1677,120,0	0/0:18,0:18:54.13:0,54,776	0/0:11,1:12:27.88:0,28,405	0/0:17,0:17:41.44:0,41,528	0/0:20,0:20:60.18:0,60,894	1/1:0,17:17:39.13:545,39,0	1/1:0,27:27:66.22:923,66,0	0/0:32,0:31:96.31:0,96,1446	0/0:35,0:35:99:0,105,1598	0/0:38,0:38:99:0,114,1743	0/0:25,0:25:75.23:0,75,1127	0/0:22,0:22:66.22:0,66,1031	0/0:18,0:18:54.16:0,54,799	0/0:36,0:36:99:0,108,1667	0/0:36,0:36:99:0,108,1668	0/0:40,0:40:99:0,120,1810	0/0:27,0:27:81.23:0,81,1218	0/0:18,0:18:48.09:0,48,679	0/0:22,0:22:66.22:0,66,1011	0/0:22,0:22:66.22:0,66,1032	0/0:54,0:54:99:0,160,2442	0/0:21,0:21:63.17:0,63,939	0/0:24,0:24:72.23:0,72,1104	0/0:34,0:34:99:0,102,1546	0/0:13,0:13:39.12:0,39,586	0/0:33,0:33:99:0,99,1484	0/0:29,0:29:87.28:0,87,1338	0/0:24,0:24:72.25:0,72,1126
chr10	51440560	.	GCA	G	2069.49	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=11.233;DP=840;FS=3.573;HRun=0;HaplotypeScore=93.6002;InbreedingCoeff=0.9765;MQ=60.92;MQ0=2;MQRankSum=0.327;QD=29.56;ReadPosRankSum=1.375;VQSLOD=5.4534;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,27:29:78.25:992,78,0	0/0:12,0:12:27.08:0,27,419	0/0:30,0:18:36.04:0,36,487	0/0:32,0:16:31.89:0,32,428	0/0:38,1:39:70.22:0,70,1655	1/1:2,13:15:36.12:458,36,0	1/1:4,22:26:60.19:763,60,0	0/0:39,1:39:49.16:0,49,1317	0/0:36,0:36:93.30:0,93,1521	0/0:36,2:38:33.02:0,33,1623	0/0:35,0:35:96.33:0,96,1582	0/0:23,1:24:34.11:0,34,1109	0/0:23,0:23:66.19:0,66,1053	0/0:46,0:46:99:0,117,1899	0/0:29,0:29:75.24:0,75,1212	0/0:35,0:35:99:0,102,1668	0/0:32,0:32:87.30:0,87,1451	0/0:8,0:8:13.36:0,13,341	0/0:22,1:23:21.99:0,22,865	0/0:35,0:35:99:0,99,1615	0/0:48,0:48:99:0,126,2082	0/0:32,0:32:81.28:0,81,1333	0/0:31,0:31:87.30:0,87,1446	0/0:29,2:31:11:0,11,1246	0/0:16,0:16:33.11:0,33,549	0/0:40,0:40:99:0,108,1775	0/0:30,0:30:81.25:0,81,1289	0/0:25,0:25:72.25:0,72,1204
chr10	51441062	.	TTAA	T	6425.01	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=9.685;DP=521;FS=0.377;HRun=0;HaplotypeScore=78.2052;InbreedingCoeff=0.9794;MQ=64.50;MQ0=0;MQRankSum=-1.096;QD=44.93;ReadPosRankSum=3.350;VQSLOD=6.3437;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:66.23:0,66,1519	1/1:0,13:13:39.13:688,39,0	0/0:6,0:6:18.06:0,18,334	0/0:4,0:4:9.01:0,9,141	0/0:28,0:28:84.29:0,84,1907	0/0:16,0:15:45.15:0,45,1044	0/0:11,0:11:30.10:0,30,710	0/0:46,0:46:99:0,129,2918	0/0:14,0:14:42.14:0,42,959	0/0:25,0:25:69.24:0,69,1632	0/0:17,0:17:51.18:0,51,1206	1/1:0,19:19:45.15:794,45,0	1/1:0,14:14:39.13:688,39,0	0/0:17,0:17:45.15:0,45,1064	1/1:1,18:19:48.16:845,48,0	1/1:0,9:9:21.07:370,21,0	0/0:13,0:13:39.12:0,39,876	1/1:0,14:14:39.13:688,39,0	0/0:19,0:19:57.19:0,57,1245	0/0:23,0:23:69.24:0,69,1590	0/0:10,0:10:24.08:0,24,566	1/1:1,21:22:63.21:1088,63,0	1/1:1,23:24:63.22:1107,63,0	1/1:1,8:9:9.03:159,9,0	0/0:24,0:24:72.25:0,72,1696	0/0:26,0:26:78.27:0,78,1828	0/0:43,0:42:99:0,129,2967	0/0:14,0:14:39.13:0,39,919
chr10	51441121	.	G	GA	1234.61	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-5.515;DP=482;FS=5.106;HRun=7;HaplotypeScore=57.2914;InbreedingCoeff=0.9660;MQ=72.85;MQ0=0;MQRankSum=-0.174;QD=24.21;ReadPosRankSum=1.299;VQSLOD=4.1451;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,17:25:54.17:652,54,0	0/0:10,0:10:27.04:0,27,261	0/0:10,0:9:14.64:0,15,141	0/0:9,0:8:9.38:0,9,67	0/0:29,0:29:81.13:0,81,782	1/1:1,13:14:36.11:435,36,0	1/1:1,11:12:24.07:290,24,0	0/0:32,0:32:90.11:0,90,860	0/0:22,0:22:57.08:0,57,550	0/0:23,0:23:57.08:0,57,548	0/0:17,0:17:45.07:0,45,435	0/0:17,0:17:39.06:0,39,377	0/0:17,0:17:51.08:0,51,492	0/0:12,0:12:27.04:0,27,261	0/0:20,0:20:51.08:0,51,493	0/0:14,0:14:36.06:0,36,348	0/0:13,0:13:39.06:0,39,377	0/0:12,0:12:30.05:0,30,290	0/0:19,0:19:48.07:0,48,464	0/0:15,0:15:42.05:0,42,400	0/0:16,0:16:48.08:0,48,464	0/0:11,0:11:24.04:0,24,232	0/0:13,0:13:24.03:0,24,232	0/0:12,0:12:27.04:0,27,261	0/0:21,0:21:63.08:0,63,601	0/0:21,0:21:48.07:0,48,464	0/0:39,0:39:99:0,114,1100	0/0:7,0:7:15.01:0,15,145
chr10	51441406	.	CTAAA	C	1088.12	PASS	AB=0.875;AC=29;AF=0.967;AN=30;BaseQRankSum=0.868;DP=253;FS=3.912;HRun=0;HaplotypeScore=47.2729;InbreedingCoeff=-0.1468;MQ=74.15;MQ0=1;MQRankSum=1.169;QD=6.68;ReadPosRankSum=2.150;VQSLOD=1.4325;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	1/1:7,2:9:6.02:91,6,0	1/1:5,3:8:6.02:91,6,0	0/1:6,1:7:39.41:39,0,62	./.	1/1:7,1:8:3.01:45,3,0	1/1:12,2:14:6.02:91,6,0	1/1:6,4:9:11.87:181,12,0	1/1:7,2:9:6.02:91,6,0	./.	./.	./.	1/1:9,0:10:2.98:21,3,0	1/1:13,0:19:5.26:48,5,0	./.	1/1:11,0:14:9.01:84,9,0	1/1:10,0:14:3:28,3,0	./.	1/1:4,1:5:3.01:45,3,0	./.	./.	./.	1/1:7,2:9:5.99:67,6,0	1/1:12,0:15:9.01:84,9,0	1/1:6,6:12:12.03:164,12,0
chr10	51443557	.	AAGCAGGACC	A	5263.24	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=12.210;DP=652;FS=0.000;HRun=0;HaplotypeScore=171.3271;InbreedingCoeff=0.9983;MQ=85.80;MQ0=0;MQRankSum=-12.242;QD=58.48;ReadPosRankSum=-0.433;VQSLOD=4.5659;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,44:44:90.31:2673,90,0	0/0:7,0:7:21.07:0,21,1029	0/0:21,0:21:57.15:0,57,2028	0/0:23,0:23:64.75:0,65,2458	0/0:25,0:25:75.24:0,75,3430	1/1:0,23:23:48.16:1402,48,0	1/1:0,23:23:39.13:1188,39,0	0/0:20,0:20:57.15:0,57,2182	0/0:25,0:25:72.25:0,72,3393	0/0:27,0:27:78.26:0,78,3557	0/0:10,0:10:30.09:0,30,1273	0/0:17,0:17:42.14:0,42,1835	0/0:27,0:27:81.20:0,81,3284	0/0:22,0:22:66.21:0,66,2813	0/0:29,0:29:84.27:0,84,3699	0/0:26,0:26:78.25:0,78,3588	0/0:28,0:28:84.25:0,84,3693	0/0:19,0:19:54.19:0,54,2479	0/0:23,0:23:66.23:0,66,2678	0/0:16,0:16:48.16:0,48,2058	0/0:30,0:30:87.17:0,87,3805	0/0:16,0:16:48.16:0,48,2120	0/0:22,0:22:63.17:0,63,2529	0/0:39,0:39:99:0,117,5291	0/0:21,0:21:57.18:0,57,2498	0/0:32,0:32:93.31:0,93,4078	0/0:24,0:24:72.21:0,72,2912	0/0:13,0:13:39.13:0,39,1713
chr10	51444714	.	GT	G	621.54	PASS	AB=0.952;AC=6;AF=0.107;AN=56;BaseQRankSum=3.364;DP=632;FS=1.899;HRun=12;HaplotypeScore=84.4674;InbreedingCoeff=0.5776;MQ=71.17;MQ0=0;MQRankSum=1.421;QD=7.58;ReadPosRankSum=1.418;VQSLOD=2.8380;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,1:37:67.07:0,67,821	0/0:7,0:20:22.89:0,23,141	0/0:20,1:19:6.71:0,7,220	0/1:18,0:16:15.54:16,0,162	0/0:23,2:25:32.22:0,32,491	1/1:1,16:17:44.82:348,45,0	1/1:8,20:28:47.80:371,48,0	0/0:37,0:37:84.14:0,84,839	0/0:24,0:24:60.10:0,60,597	0/0:21,0:21:54.10:0,54,539	0/0:18,0:18:48.05:0,48,476	0/0:6,0:14:11.91:0,12,66	0/0:9,0:26:21.07:0,21,113	0/0:25,0:25:63.10:0,63,627	0/0:4,0:22:23:0,23,130	0/0:6,0:18:9.85:0,10,80	0/0:22,0:23:68.93:0,69,663	0/0:5,0:18:11.51:0,12,68	0/0:24,2:26:28.78:0,29,652	0/0:24,1:25:36.89:0,37,555	0/0:14,0:16:41.74:0,42,389	0/0:5,0:17:23.24:0,23,116	0/0:7,0:20:30.80:0,31,165	0/0:3,0:23:31.25:0,31,158	0/1:15,2:19:21.88:22,0,290	0/0:29,1:31:31.38:0,31,644	0/0:21,1:22:27.86:0,28,464	0/0:21,0:21:41.53:0,42,386
chr10	51445625	.	GTGTGTCTCTC	G	839.08	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=4.314;DP=716;FS=4.213;HRun=0;HaplotypeScore=211.7980;InbreedingCoeff=0.8811;MQ=58.34;MQ0=17;MQRankSum=-3.502;QD=12.16;ReadPosRankSum=0.568;VQSLOD=2.6830;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:3,25:28:6.02:203,6,0	0/0:17,0:17:21.04:0,21,298	0/0:18,0:8:6.52:0,7,222	0/0:28,0:15:16.58:0,17,667	0/0:33,0:33:75.22:0,75,2294	1/1:6,13:18:14.52:452,15,0	1/1:7,14:22:11.93:312,12,0	0/0:46,0:45:99:0,135,3035	0/0:19,0:19:54.18:0,54,2029	0/0:23,0:23:69.20:0,69,2067	0/0:18,0:17:48.15:0,48,1440	0/0:20,0:19:12.04:0,12,197	0/0:29,0:29:21.04:0,21,319	0/0:23,0:22:65.96:0,66,2461	0/0:24,0:24:14.22:0,14,170	0/0:36,0:36:30.51:0,31,708	0/0:25,0:25:75.23:0,75,2570	0/0:20,0:20:30.06:0,30,470	0/0:23,0:21:62.16:0,62,1878	0/0:36,0:33:96.33:0,96,2535	0/0:36,0:35:96.10:0,96,3170	0/0:23,0:22:19.07:0,19,276	0/0:25,0:24:17.32:0,17,206	0/0:29,0:29:44.74:0,45,710	0/0:17,0:17:48.10:0,48,1346	0/0:32,0:32:96.29:0,96,3289	0/0:32,0:30:83.87:0,84,2751	0/0:15,0:12:36.12:0,36,974
chr10	51445627	.	GTGTC	G	4032.50	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=11.443;DP=697;FS=0.994;HRun=0;HaplotypeScore=136.9950;InbreedingCoeff=0.7738;MQ=58.48;MQ0=17;MQRankSum=-0.444;QD=13.58;ReadPosRankSum=9.118;VQSLOD=2.1741;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:26:6.01:57,6,0	1/1:2,14:16:15.05:298,15,0	0/1:15,0:7:1.71:2,0,95	0/0:28,0:15:26.65:0,27,301	0/0:32,0:32:68.95:0,69,1108	0/1:19,0:18:61.89:62,0,71	0/1:22,0:22:31.70:32,0,92	0/0:44,0:43:99:0,100,1472	0/0:19,0:19:53.73:0,54,985	0/0:23,0:23:65.56:0,66,1030	0/0:17,0:16:44.94:0,45,683	1/1:1,18:19:11.78:191,12,0	1/1:1,26:28:18.06:355,18,0	0/0:24,0:23:65.86:0,66,1221	1/1:0,21:24:15.05:255,15,0	1/1:1,29:32:45.15:852,45,0	0/0:25,0:25:47.57:0,48,1185	1/1:1,19:20:29.31:543,29,0	0/0:23,0:21:36.29:0,36,900	0/0:35,0:32:92.94:0,93,1050	0/0:37,0:36:92.45:0,92,1560	1/1:2,20:21:14.94:298,15,0	1/1:1,21:23:11.97:217,12,0	1/1:0,27:29:45.15:871,45,0	0/0:17,0:17:43.85:0,44,614	0/0:32,0:32:85.08:0,85,1517	0/0:29,0:27:79.30:0,79,1220	0/0:15,0:12:35.94:0,36,423
chr10	51445629	.	GTC	G	1553.39	PASS	AB=0.922;AC=33;AF=0.611;AN=54;BaseQRankSum=12.157;DP=693;FS=2.873;HRun=0;HaplotypeScore=123.3661;InbreedingCoeff=0.0477;MQ=58.27;MQ0=17;MQRankSum=0.461;QD=2.82;ReadPosRankSum=3.716;VQSLOD=2.5253;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:26:5.68:28,6,0	1/1:14,0:14:14.71:92,15,0	./.	0/0:28,0:14:0:0,0,0	0/0:25,5:31:33.11:0,33,502	1/1:19,0:18:14.37:88,14,0	1/1:22,0:22:0.92:32,1,0	0/1:46,0:45:35.98:36,0,324	0/1:17,3:20:32.26:32,0,416	0/1:20,2:22:14.91:15,0,428	0/1:14,1:14:10.12:10,0,271	0/1:20,0:19:13.56:43,0,14	1/1:27,0:27:17.65:109,18,0	0/0:25,0:24:42.12:0,42,596	1/1:24,0:24:14.51:83,15,0	1/1:31,1:32:44.08:277,44,0	0/1:23,1:25:3.22:3,0,521	1/1:20,0:20:26.49:166,26,0	0/1:23,1:23:60.03:60,0,437	0/1:34,2:33:51.86:52,0,244	0/1:31,6:36:68.11:68,0,685	1/1:22,0:21:14.57:92,15,0	1/1:23,0:22:11.67:69,12,0	1/1:29,0:29:44.03:271,44,0	0/1:14,2:17:61.22:61,0,226	0/1:27,3:30:32.24:32,0,536	0/0:29,0:27:4.59:0,5,489	0/0:15,0:12:6.02:0,6,92
chr10	51446932	.	ACTCTCTCTCTCT	A	951.64	PASS	AB=0.876;AC=17;AF=0.304;AN=56;BaseQRankSum=3.597;DP=544;FS=0.000;HRun=0;HaplotypeScore=181.4993;InbreedingCoeff=0.6157;MQ=65.61;MQ0=28;MQRankSum=-1.300;QD=5.14;ReadPosRankSum=0.044;VQSLOD=2.4172;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:27,2:29:13.33:186,13,0	1/1:6,0:6:3.01:76,3,0	0/0:33,0:13:0:0,0,0	0/1:46,0:15:0.20:0,0,0	0/0:19,0:21:30.09:0,30,956	0/0:17,0:15:8.07:0,8,120	0/0:15,0:13:4.19:0,4,92	0/0:19,0:19:13.29:0,13,290	0/0:19,0:18:20.93:0,21,662	0/0:10,0:15:33.11:0,33,1020	0/0:13,0:13:27.09:0,27,988	0/1:14,2:16:11.95:220,0,12	1/1:12,10:21:5.17:206,5,0	0/0:19,0:20:33.10:0,33,1093	1/1:10,1:11:3.01:57,3,0	1/1:4,4:8:2.80:103,3,0	0/0:18,0:22:32.12:0,32,867	1/1:7,2:8:6.02:207,6,0	0/0:19,0:15:24.84:0,25,786	0/0:19,0:18:27.09:0,27,1084	0/0:19,0:35:39.10:0,39,1633	0/0:4,6:10:0:0,0,0	0/1:11,6:16:0:0,0,0	1/1:12,7:20:3.01:50,3,0	0/0:12,0:13:21.07:0,21,620	0/0:20,0:20:39.13:0,39,1257	0/0:24,0:24:36.58:0,37,1616	0/0:12,0:18:12.04:0,12,381
chr10	51446973	.	CTCTG	C	43.07	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=5.447;DP=536;FS=43.805;HRun=0;HaplotypeScore=123.2901;InbreedingCoeff=0.3225;MQ=55.77;MQ0=8;MQRankSum=-2.350;QD=0.55;ReadPosRankSum=-0.348;VQSLOD=0.6388;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:30:59.52:0,60,556	0/0:11,0:11:32.48:0,32,279	0/0:39,0:21:28.31:0,28,442	0/0:37,0:12:26.77:0,27,231	0/0:23,0:23:0.68:0,1,244	1/1:14,1:14:8.99:103,9,0	1/1:13,2:15:2.14:14,2,0	0/0:24,0:24:71.45:0,71,634	0/1:13,0:13:4.78:5,0,146	0/1:19,0:19:30.31:30,0,309	0/0:9,0:9:17.97:0,18,204	0/0:15,0:15:17.75:0,18,250	0/0:24,0:24:4.28:0,4,190	0/0:17,0:17:36.11:0,36,429	0/0:14,0:14:29.88:0,30,231	0/0:8,0:8:1.29:0,1,65	0/0:24,0:24:29.16:0,29,400	0/0:9,0:8:7.80:0,8,137	0/0:14,0:14:38.80:0,39,327	0/0:18,0:17:10.22:0,10,374	0/0:42,0:42:71.86:0,72,922	0/0:15,0:15:23.81:0,24,219	0/0:13,0:13:17.72:0,18,127	0/0:19,0:19:20.32:0,20,150	0/0:14,2:16:38.71:0,39,356	0/1:16,0:16:1.77:2,0,236	0/0:18,0:18:50.35:0,50,833	0/0:17,0:17:37.77:0,38,332
chr10	51446993	.	C	CGT	34.62	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=4.036;DP=586;FS=8.616;HRun=0;HaplotypeScore=113.8101;InbreedingCoeff=0.5723;MQ=55.65;MQ0=18;MQRankSum=-0.648;QD=0.67;ReadPosRankSum=-1.762;VQSLOD=1.3748;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:30:62.82:0,63,766	0/0:14,0:14:39.08:0,39,493	0/0:44,0:21:41.87:0,42,526	0/0:37,0:14:27.09:0,27,354	0/0:15,0:15:33.05:0,33,412	1/1:12,2:17:0.07:103,0,0	1/1:10,10:20:3.40:22,3,0	0/0:27,0:25:69.14:0,69,888	0/0:13,0:13:30.09:0,30,389	0/0:18,0:18:45.52:0,46,535	0/0:9,0:9:18.05:0,18,227	0/0:14,0:14:33.11:0,33,446	0/0:23,0:22:33.91:0,34,418	0/0:27,0:27:66.18:0,66,830	0/0:15,0:15:32.95:0,33,420	0/0:13,0:13:27.09:0,27,365	0/0:30,0:30:72.21:0,72,942	0/0:10,0:10:25.81:0,26,299	0/0:16,0:14:39.12:0,39,500	0/0:16,0:15:30.10:0,30,389	0/0:42,0:41:83.35:0,83,1047	0/0:16,0:16:6.08:0,6,242	0/1:14,0:14:0.59:1,0,261	0/0:27,0:27:36.07:0,36,466	0/0:18,0:18:46.64:0,47,594	0/0:24,0:24:65.41:0,65,793	0/0:17,0:17:51.12:0,51,628	0/0:17,0:17:35.98:0,36,422
chr10	51446999	.	CGT	C	588.49	PASS	AB=0.882;AC=20;AF=0.370;AN=54;BaseQRankSum=5.840;DP=585;FS=0.000;HRun=0;HaplotypeScore=103.9809;InbreedingCoeff=-0.6009;MQ=55.19;MQ0=20;MQRankSum=1.090;QD=1.40;ReadPosRankSum=1.037;VQSLOD=1.8790;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:32,1:32:34.49:34,0,465	0/1:13,1:14:7.44:7,0,277	./.	0/0:35,0:12:3:0,3,25	0/1:12,3:15:13.43:13,0,215	0/0:16,0:16:13.88:0,14,92	0/1:23,0:22:10.23:10,0,38	0/1:24,3:25:32.11:32,0,217	0/1:10,2:12:16.31:16,0,214	0/1:13,4:18:49.98:50,0,320	0/1:5,3:8:25.40:25,0,74	0/0:13,0:12:27.02:0,27,328	0/0:22,0:21:29.24:0,29,381	0/1:19,6:25:49.26:49,0,619	0/0:16,2:18:1.66:0,2,431	0/0:14,0:14:11.15:0,11,336	0/1:25,7:32:99:137,0,659	0/0:9,0:10:24.04:0,24,318	0/1:16,2:15:37.93:38,0,164	0/1:11,4:15:58.70:59,0,187	0/1:39,2:41:58.09:58,0,468	0/1:17,1:18:7.37:7,0,292	0/1:13,1:14:10.33:10,0,285	0/1:26,2:28:29.84:30,0,446	0/1:16,1:18:22.25:22,0,337	0/1:19,6:25:75.21:75,0,529	0/1:17,0:18:15.50:16,0,357	0/1:14,2:16:47.82:48,0,167
chr10	51447068	.	A	AT	1084.55	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-3.549;DP=550;FS=4.332;HRun=6;HaplotypeScore=67.9743;InbreedingCoeff=0.9425;MQ=76.53;MQ0=1;MQRankSum=-0.656;QD=26.45;ReadPosRankSum=-0.709;VQSLOD=3.7886;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:72.16:0,72,734	0/0:6,0:6:18.04:0,18,184	0/0:13,0:13:5.86:0,6,209	0/0:12,0:12:29.20:0,29,267	0/0:21,0:21:63.14:0,63,641	1/1:2,19:21:54.17:679,54,0	1/1:4,16:20:42.13:527,42,0	0/0:25,0:25:66.14:0,66,669	0/0:17,0:17:48.11:0,48,489	0/0:14,0:14:30.06:0,30,306	0/0:17,0:17:48.11:0,48,489	0/0:16,0:16:48.11:0,48,490	0/0:21,0:21:60.13:0,60,612	0/0:25,0:25:66.15:0,66,673	0/0:24,0:24:60.13:0,60,612	0/0:18,0:18:51.11:0,51,520	0/0:39,0:39:99:0,111,1115	0/0:14,0:14:36.08:0,36,367	0/0:14,0:14:33.05:0,33,327	0/0:21,0:21:57.10:0,57,568	0/0:21,0:20:54.12:0,54,550	0/0:18,0:18:51.11:0,51,519	0/0:16,0:16:42.09:0,42,428	0/0:30,0:30:84.18:0,84,853	0/0:20,0:20:54.12:0,54,550	0/0:22,0:22:57.12:0,57,581	0/0:25,0:25:69.12:0,69,694	0/0:16,0:16:48.11:0,48,490
chr10	51447469	.	G	GT	1155.57	PASS	AB=0.931;AC=8;AF=0.143;AN=56;BaseQRankSum=-6.530;DP=649;FS=10.832;HRun=10;HaplotypeScore=78.9787;InbreedingCoeff=0.4139;MQ=67.88;MQ0=2;MQRankSum=0.573;QD=10.23;ReadPosRankSum=0.472;VQSLOD=1.7493;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:79.09:0,79,638	0/0:17,0:17:50.92:0,51,415	0/1:16,0:13:29.72:30,0,81	0/1:13,0:10:27.88:28,0,39	0/0:26,0:26:71.80:0,72,574	1/1:5,37:43:68.45:917,68,0	1/1:1,13:15:26.90:270,27,0	0/0:43,0:43:91.26:0,91,732	0/0:10,0:10:23.97:0,24,197	0/0:31,1:32:45.94:0,46,584	0/0:21,0:21:26.01:0,26,412	0/0:25,0:25:65.85:0,66,531	0/0:22,0:22:65.92:0,66,541	0/0:19,2:21:15.94:0,16,335	0/0:26,0:26:62.81:0,63,507	0/0:19,0:19:50.82:0,51,405	0/0:13,0:13:35.95:0,36,295	0/0:23,0:22:30.34:0,30,370	0/0:23,0:23:59.83:0,60,480	0/0:23,1:24:36.02:0,36,422	0/1:11,2:13:30.96:31,0,189	0/0:31,0:31:74.77:0,75,608	0/0:26,0:26:77.87:0,78,632	0/1:10,2:12:28.06:28,0,201	0/0:23,0:23:56.57:0,57,452	0/0:33,0:33:74.55:0,75,600	0/0:30,0:31:85.88:0,86,688	0/0:15,0:15:38.91:0,39,316
chr10	51448315	.	GT	G	2222.81	PASS	AC=20;AF=0.370;AN=54;BaseQRankSum=14.388;DP=441;FS=6.023;HRun=1;HaplotypeScore=57.5364;InbreedingCoeff=0.9947;MQ=94.81;MQ0=0;MQRankSum=0.139;QD=14.16;ReadPosRankSum=4.089;VQSLOD=2.9996;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:93.24:0,93,1427	./.	0/0:23,0:23:63.05:0,63,916	0/0:19,0:19:57.19:0,57,870	0/0:21,0:21:60.20:0,60,949	1/1:0,15:15:45.15:629,45,0	1/1:0,14:14:36.12:503,36,0	0/0:23,0:23:69.23:0,69,1077	0/0:10,0:10:30.10:0,30,479	0/0:16,0:16:48.16:0,48,767	0/0:12,0:12:36.11:0,36,549	1/1:18,0:18:42.90:180,43,0	1/1:19,0:19:16.06:141,16,0	0/0:14,0:14:39.13:0,39,622	1/1:17,0:17:21.64:170,22,0	1/1:17,0:17:40.53:178,41,0	0/0:16,0:16:45.11:0,45,660	1/1:10,0:10:24.45:108,24,0	0/0:14,0:14:42.14:0,42,667	0/0:13,0:13:39.13:0,39,622	0/0:21,0:21:57.13:0,57,858	1/1:7,0:7:19.06:84,19,0	1/1:10,0:10:22.02:103,22,0	1/1:30,0:30:76.57:343,77,0	0/0:8,0:8:24.08:0,24,383	0/0:17,0:17:51.14:0,51,785	0/0:19,0:19:57.18:0,57,883	0/0:7,0:7:21.07:0,21,330
chr10	51448316	.	TC	T	4513.86	PASS	AC=20;AF=0.370;AN=54;BaseQRankSum=10.783;DP=449;FS=3.352;HRun=4;HaplotypeScore=50.8514;InbreedingCoeff=0.9980;MQ=94.31;MQ0=0;MQRankSum=-2.036;QD=28.57;ReadPosRankSum=4.115;VQSLOD=4.4139;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:87.29:0,87,1216	./.	0/0:22,1:23:60.15:0,60,798	0/0:19,0:19:57.18:0,57,777	0/0:22,0:22:63.20:0,63,864	1/1:16,0:16:43.70:248,44,0	1/1:14,0:14:34.96:199,35,0	0/0:24,0:24:69.22:0,69,950	0/0:11,0:11:33.10:0,33,445	0/0:16,0:16:48.16:0,48,672	0/0:13,0:13:36.11:0,36,486	1/1:0,18:18:48.15:576,48,0	1/1:1,18:19:42.13:504,42,0	0/0:15,0:15:42.13:0,42,571	1/1:1,16:17:48.15:576,48,0	1/1:0,17:17:45.14:540,45,0	0/0:17,0:17:45.12:0,45,608	1/1:0,10:10:27.08:324,27,0	0/0:15,0:15:45.14:0,45,614	0/0:13,0:13:39.13:0,39,546	0/0:21,0:21:63.14:0,63,837	1/1:0,7:7:21.06:252,21,0	1/1:0,10:10:24.07:288,24,0	1/1:0,30:30:84.26:1008,84,0	0/0:9,0:9:27.08:0,27,363	0/0:16,0:16:48.16:0,48,672	0/0:19,0:19:57.19:0,57,797	0/0:7,0:7:21.07:0,21,294
chr10	51451379	.	G	GA	641.56	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=-6.626;DP=596;FS=20.003;HRun=9;HaplotypeScore=57.7902;InbreedingCoeff=0.7675;MQ=67.69;MQ0=0;MQRankSum=-0.843;QD=10.87;ReadPosRankSum=-1.356;VQSLOD=0.6897;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:71.95:0,72,620	0/0:7,0:7:17.99:0,18,156	0/1:23,0:12:10.64:11,0,55	0/0:15,0:10:15.87:0,16,131	0/0:29,1:30:35.79:0,36,539	1/1:5,10:16:12.87:346,13,0	1/1:5,15:20:17.14:406,17,0	0/0:32,0:32:83.66:0,84,729	0/0:18,0:18:48.86:0,49,414	0/0:38,0:38:66.32:0,66,801	0/0:11,0:12:35.03:0,35,292	0/0:23,0:23:68.99:0,69,599	0/0:21,0:20:50.98:0,51,443	0/0:19,0:19:56.97:0,57,491	0/0:18,0:18:47.99:0,48,417	0/0:16,0:16:38.99:0,39,338	0/0:28,0:28:77.92:0,78,664	0/0:25,0:24:56.97:0,57,492	0/0:26,0:26:71.98:0,72,625	0/0:25,1:26:32.78:0,33,510	0/0:12,0:12:32.99:0,33,286	0/0:13,0:13:32.99:0,33,286	0/0:19,1:19:20.79:0,21,406	0/0:21,0:21:59.99:0,60,521	0/0:24,0:24:32.79:0,33,514	0/0:20,0:20:50.99:0,51,443	0/0:26,0:26:62.97:0,63,547	0/0:18,0:18:47.98:0,48,416
chr10	51452165	.	C	CCATGCTCA	5714.29	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-8.493;DP=915;FS=5.514;HRun=0;HaplotypeScore=216.0793;InbreedingCoeff=0.9994;MQ=73.11;MQ0=1;MQRankSum=-11.121;QD=73.26;ReadPosRankSum=-2.300;VQSLOD=4.0330;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:69.13:0,69,1630	0/0:19,0:19:48.15:0,48,1145	0/0:29,0:27:60.10:0,60,1318	0/0:22,0:21:39.46:0,39,654	0/0:40,0:40:96.31:0,96,2478	1/1:6,33:39:75.26:3175,75,0	1/1:15,23:38:60.21:2539,60,0	0/0:40,0:39:75.22:0,75,1703	0/0:42,0:42:96.32:0,96,2364	0/0:39,0:39:93.29:0,93,2304	0/0:27,0:27:72.21:0,72,1737	0/0:39,0:39:99:0,102,2515	0/0:25,0:25:66.21:0,66,1608	0/0:43,0:43:99:0,120,2934	0/0:28,0:28:75.21:0,75,1713	0/0:42,0:42:99:0,114,2875	0/0:18,0:18:45.14:0,45,1107	0/0:17,0:17:48.05:0,48,1082	0/0:42,0:42:87.25:0,87,1961	0/0:34,0:34:81.26:0,81,2043	0/0:67,0:67:99:0,163,4122	0/0:34,0:34:87.27:0,87,2156	0/0:26,0:26:66.20:0,66,1606	0/0:30,0:30:75.19:0,75,1703	0/0:21,0:21:51.16:0,51,1296	0/0:34,0:34:81.27:0,81,2090	0/0:38,0:38:93.30:0,93,2351	0/0:11,0:11:27.09:0,27,714
chr10	51452750	.	TA	T	3886.32	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=5.202;DP=788;FS=2.211;HRun=3;HaplotypeScore=86.9729;InbreedingCoeff=0.9967;MQ=81.44;MQ0=0;MQRankSum=-0.343;QD=34.39;ReadPosRankSum=3.193;VQSLOD=4.2526;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,62:62:99:2176,178,0	0/0:9,0:9:27.06:0,27,367	0/0:17,0:17:34.17:0,34,464	0/0:27,0:27:66.96:0,67,896	0/0:31,0:31:90.29:0,90,1259	1/1:0,23:23:66.21:818,66,0	1/1:1,27:28:72.23:892,72,0	0/0:36,0:36:99:0,105,1442	0/0:24,0:24:72.07:0,72,1007	0/0:35,0:35:99:0,102,1449	0/0:30,0:30:90.29:0,90,1279	0/0:35,0:35:99:0,102,1448	0/0:26,0:26:78.23:0,78,1076	0/0:32,0:32:90.29:0,90,1279	0/0:31,0:31:87.28:0,87,1216	0/0:27,0:27:81.26:0,81,1141	0/0:24,0:24:69.20:0,69,957	0/0:19,0:19:54.15:0,54,755	0/0:29,0:29:87.23:0,87,1187	0/0:20,0:20:60.20:0,60,862	0/0:41,0:41:99:0,123,1749	0/0:31,0:31:93.26:0,93,1299	0/0:25,0:25:66.21:0,66,934	0/0:20,0:20:54.17:0,54,748	0/0:26,0:26:78.24:0,78,1090	0/0:35,0:35:99:0,102,1409	0/0:39,0:39:99:0,117,1649	0/0:6,0:6:18.06:0,18,259
chr10	51454692	.	TCTTCCTTACTTAGTTCACATC	T	6233.12	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=10.009;DP=769;FS=4.045;HRun=0;HaplotypeScore=400.9587;InbreedingCoeff=0.9984;MQ=87.31;MQ0=0;MQRankSum=-10.009;QD=78.90;ReadPosRankSum=1.311;VQSLOD=3.4284;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,16:30:33.11:1777,33,0	0/0:12,0:12:36.11:0,36,3378	0/0:24,0:24:72.25:0,72,4504	0/0:32,0:31:87.30:0,87,6411	0/0:25,0:25:72.25:0,72,6414	1/1:2,23:25:54.19:3210,54,0	1/1:11,12:23:21.07:1247,21,0	0/0:32,0:32:87.28:0,87,7692	0/0:27,0:27:81.28:0,81,7119	0/0:32,0:32:96.33:0,96,8100	0/0:23,0:23:66.22:0,66,6373	0/0:27,0:27:78.27:0,78,6956	0/0:30,0:30:90.31:0,90,7538	0/0:32,0:32:96.32:0,96,8360	0/0:29,0:29:87.30:0,87,7829	0/0:32,0:32:93.32:0,93,8354	0/0:22,0:22:66.21:0,66,5571	0/0:18,0:18:54.19:0,54,4654	0/0:18,0:18:54.19:0,54,3545	0/0:30,0:30:90.31:0,90,8646	0/0:43,0:43:99:0,123,10742	0/0:26,0:26:78.27:0,78,7431	0/0:24,0:23:69.24:0,69,6138	0/0:29,0:29:87.30:0,87,7453	0/0:28,0:28:84.29:0,84,7877	0/0:41,0:41:99:0,117,10158	0/0:40,0:39:99:0,120,10862	0/0:14,0:14:39.13:0,39,3585
chr10	51454844	.	CA	C	728.65	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.626;DP=712;FS=0.000;HRun=2;HaplotypeScore=76.0661;InbreedingCoeff=0.9998;MQ=83.92;MQ0=0;MQRankSum=-4.397;QD=26.02;ReadPosRankSum=-1.199;VQSLOD=2.9153;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,25:28:69.09:824,69,0	0/0:16,0:16:45.14:0,45,654	0/0:23,0:23:66.19:0,66,919	0/0:23,0:23:66.16:0,66,891	0/0:30,0:30:84.28:0,84,1237	0/0:27,0:27:78.20:0,78,1120	0/0:26,0:26:69.18:0,69,965	0/0:28,0:28:84.28:0,84,1241	0/0:30,0:30:87.29:0,87,1301	0/0:31,0:31:93.31:0,93,1377	0/0:27,0:27:81.26:0,81,1195	0/0:23,0:23:69.22:0,69,1014	0/0:27,0:27:81.27:0,81,1212	0/0:29,0:29:87.29:0,87,1302	0/0:23,0:23:69.22:0,69,998	0/0:31,0:31:93.26:0,93,1367	0/0:19,0:19:57.19:0,57,854	0/0:15,0:15:36.12:0,36,540	0/0:21,0:21:57.17:0,57,835	0/0:31,0:31:90.28:0,90,1306	0/0:34,0:34:99:0,99,1459	0/0:25,0:25:69.23:0,69,1034	0/0:24,0:24:72.24:0,72,1058	0/0:23,0:23:66.21:0,66,970	0/0:24,0:24:72.24:0,72,1062	0/0:30,0:30:87.28:0,87,1272	0/0:31,0:31:93.30:0,93,1374	0/0:13,0:13:39.13:0,39,584
chr10	51454900	.	GA	G	1311.56	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=10.864;DP=677;FS=5.904;HRun=9;HaplotypeScore=68.4748;InbreedingCoeff=0.9982;MQ=70.58;MQ0=0;MQRankSum=-4.969;QD=18.22;ReadPosRankSum=0.837;VQSLOD=3.7672;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,19:23:51.01:466,51,0	0/0:9,0:9:21.06:0,21,242	0/0:19,0:18:33.08:0,33,368	0/0:17,0:17:32.46:0,32,354	0/0:27,0:27:81.24:0,81,935	1/1:3,25:28:63.02:577,63,0	1/1:2,19:21:45.02:412,45,0	0/0:32,0:32:78.20:0,78,873	0/0:21,0:21:45.13:0,45,518	0/0:42,1:43:84.14:0,84,1210	0/0:31,0:31:90.26:0,90,1033	0/0:30,0:30:87.26:0,87,1004	0/0:17,0:17:42.12:0,42,485	0/0:32,0:32:84.24:0,84,959	0/0:17,0:17:45.13:0,45,519	0/0:33,0:33:87.26:0,87,1004	0/0:19,0:19:48.14:0,48,554	0/0:23,0:23:60.18:0,60,692	0/0:21,0:21:54.16:0,54,623	0/0:34,0:34:89.99:0,90,1007	0/0:11,0:11:33.10:0,33,381	0/0:28,0:28:75.22:0,75,865	0/0:26,1:27:50.75:0,51,828	0/0:15,0:15:42.12:0,42,485	0/0:24,0:24:58.94:0,59,683	0/0:25,0:25:66.20:0,66,762	0/0:29,0:29:69.20:0,69,788	0/0:21,0:21:60.18:0,60,692
chr10	51456356	.	T	TCAA	6991.45	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-14.112;DP=702;FS=0.402;HRun=0;HaplotypeScore=107.0395;InbreedingCoeff=0.9572;MQ=66.91;MQ0=2;MQRankSum=2.905;QD=35.13;ReadPosRankSum=2.371;VQSLOD=5.1572;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:33:29.73:0,30,208	1/1:1,14:15:42.14:819,42,0	0/0:35,0:30:12.02:0,12,134	0/0:27,0:21:11.70:0,12,150	0/0:41,0:42:93.20:0,93,1201	0/0:8,0:27:50.59:0,51,356	0/0:10,0:31:59.52:0,60,419	0/0:38,0:38:30.09:0,30,391	0/0:22,0:23:60.15:0,60,775	0/0:26,0:26:42.13:0,42,555	0/0:18,0:18:36.12:0,36,486	1/1:14,15:29:42.14:819,42,0	1/1:5,18:24:48.16:929,48,0	0/0:22,0:22:33.11:0,33,446	1/1:7,12:19:30.10:585,30,0	1/1:9,16:25:7.66:837,8,0	0/0:33,0:33:63.17:0,63,830	1/1:7,10:17:6.14:446,6,0	0/0:15,0:15:18.06:0,18,243	0/0:22,0:22:51.17:0,51,688	0/0:26,0:27:51.13:0,51,669	1/1:8,12:20:33.58:645,34,0	1/1:6,9:15:24.55:469,25,0	1/1:8,24:35:75.26:1441,75,0	0/0:16,0:17:27.05:0,27,345	0/0:29,0:31:48.09:0,48,609	0/0:25,0:25:51.17:0,51,689	0/0:11,0:11:15.05:0,15,203
chr10	51456601	.	A	AAGG	6037.07	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=13.694;DP=721;FS=1.331;HRun=0;HaplotypeScore=109.9583;InbreedingCoeff=0.9999;MQ=71.71;MQ0=0;MQRankSum=-9.360;QD=58.05;ReadPosRankSum=0.417;VQSLOD=6.1744;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,30:33:90.25:1953,90,0	0/0:11,0:11:33.11:0,33,574	0/0:23,0:23:61.97:0,62,961	0/0:21,0:19:39.21:0,39,523	0/0:32,0:32:96.24:0,96,1618	1/1:3,32:37:90.31:2031,90,0	1/1:8,26:34:93.28:2053,93,0	0/0:34,0:34:96.29:0,96,1551	0/0:18,0:18:54.18:0,54,949	0/0:28,0:28:84.25:0,84,1425	0/0:23,0:23:69.23:0,69,1190	0/0:24,0:24:69.21:0,69,1160	0/0:22,0:22:63.22:0,63,1111	0/0:24,0:24:72.25:0,72,1262	0/0:32,0:32:93.32:0,93,1628	0/0:22,0:22:66.20:0,66,1107	0/0:23,0:23:66.18:0,66,1101	0/0:24,0:24:60.04:0,60,987	0/0:26,0:26:78.22:0,78,1260	0/0:27,0:27:81.25:0,81,1359	0/0:23,0:23:66.21:0,66,1133	0/0:28,0:28:84.29:0,84,1468	0/0:27,0:27:81.28:0,81,1425	0/0:21,0:21:63.17:0,63,1077	0/0:27,0:27:78.27:0,78,1367	0/0:30,0:30:90.31:0,90,1587	0/0:29,0:29:81.18:0,81,1332	0/0:16,0:16:48.16:0,48,843
chr10	51457437	.	CAGA	C	2926.40	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=12.053;DP=694;FS=0.000;HRun=0;HaplotypeScore=101.6891;InbreedingCoeff=0.9983;MQ=83.54;MQ0=0;MQRankSum=-6.538;QD=37.04;ReadPosRankSum=1.278;VQSLOD=4.4950;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,36:37:87.30:1484,87,0	0/0:7,0:7:21.07:0,21,465	0/0:25,0:25:72.24:0,72,1617	0/0:19,0:19:50.66:0,51,1059	0/0:32,0:32:93.32:0,93,2047	1/1:1,24:25:63.22:1074,63,0	1/1:1,16:17:30.10:512,30,0	0/0:31,0:31:93.31:0,93,2047	0/0:33,0:33:93.28:0,93,1994	0/0:24,0:24:72.25:0,72,1636	0/0:24,0:24:66.18:0,66,1401	0/0:25,0:25:75.26:0,75,1698	0/0:31,0:31:93.31:0,93,2031	0/0:28,0:28:81.28:0,81,1829	0/0:19,0:19:57.20:0,57,1312	0/0:25,0:25:75.26:0,75,1708	0/0:25,0:25:75.19:0,75,1565	0/0:20,0:20:60.21:0,60,1353	0/0:19,0:19:54.18:0,54,1166	0/0:19,0:19:54.19:0,54,1227	0/0:25,0:25:75.18:0,75,1570	0/0:24,0:24:72.23:0,72,1614	0/0:21,0:21:63.22:0,63,1402	0/0:27,0:27:72.25:0,72,1660	0/0:26,0:26:75.24:0,75,1669	0/0:48,0:48:99:0,138,3098	0/0:26,0:26:78.27:0,78,1789	0/0:12,0:12:36.11:0,36,767
chr10	51460726	.	AGGAGAG	A	757.18	PASS	AB=0.958;AC=11;AF=0.212;AN=52;BaseQRankSum=8.517;DP=377;FS=6.432;HRun=0;HaplotypeScore=129.3259;InbreedingCoeff=0.1645;MQ=52.38;MQ0=10;MQRankSum=-8.379;QD=6.95;ReadPosRankSum=-1.260;VQSLOD=2.0430;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:3,0:3:0.45:1,0,0	0/1:4,0:4:3.16:3,0,35	0/0:32,0:12:30.09:0,30,820	0/0:20,0:7:15.93:0,16,374	0/0:12,0:12:30.08:0,30,893	./.	./.	0/0:11,0:8:24.06:0,24,569	0/0:21,0:21:63.18:0,63,1928	0/0:17,1:17:51.16:0,51,1560	0/0:5,0:5:12.04:0,12,357	0/1:15,1:16:99:205,0,127	0/1:11,0:11:23.71:24,0,179	0/0:16,0:16:42.14:0,42,1387	0/1:17,1:17:68.65:69,0,296	0/1:15,2:17:99:264,0,102	0/0:15,0:13:24.23:0,24,981	0/1:10,0:10:2.83:85,0,3	0/0:7,0:6:15.05:0,15,483	0/0:14,0:14:27.09:0,27,901	0/0:38,0:38:99:0,108,3493	0/1:11,1:12:99:101,0,187	0/0:5,0:4:11.92:0,12,112	1/1:17,1:16:15.97:143,16,0	0/0:14,0:14:36.08:0,36,1169	0/0:15,0:14:39.13:0,39,1198	0/0:10,0:8:21.07:0,21,753	0/0:13,0:13:39.13:0,39,1251
chr10	51460735	.	AGAGGGG	A	1303.18	PASS	AB=0.856;AC=10;AF=0.192;AN=52;BaseQRankSum=8.098;DP=398;FS=20.439;HRun=0;HaplotypeScore=134.2078;InbreedingCoeff=-0.0224;MQ=52.16;MQ0=8;MQRankSum=-8.843;QD=10.68;ReadPosRankSum=4.033;VQSLOD=1.4358;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:5:8.82:0,9,54	0/1:4,2:6:99:131,0,104	0/0:35,0:15:33.22:0,33,828	0/0:23,0:9:17.83:0,18,447	0/0:13,0:13:30.08:0,30,831	./.	./.	0/0:9,0:9:24.04:0,24,647	0/0:22,0:22:66:0,66,1957	0/0:17,0:16:42:0,42,1234	0/0:5,0:5:15.05:0,15,494	0/1:15,3:17:99:281,0,117	0/1:8,1:9:57.78:83,0,58	0/0:14,0:14:42.11:0,42,1263	0/1:15,2:17:28.96:252,0,29	0/1:17,4:20:99:266,0,183	0/0:14,0:12:29.06:0,29,730	0/1:11,2:13:99:104,0,125	0/0:7,0:6:14.92:0,15,276	0/0:13,0:13:32.77:0,33,649	0/0:43,0:43:99:0,117,3341	0/1:11,3:14:99:166,0,139	1/1:2,1:3:8.95:79,9,0	0/1:19,2:19:85.65:86,0,151	0/0:12,0:12:33.05:0,33,830	0/0:15,0:14:39.12:0,39,1227	0/0:12,0:10:27.09:0,27,785	0/0:14,0:14:42.12:0,42,1279
chr10	51460786	.	GGAGGTAGAGGAA	G	1812.53	PASS	AB=0.894;AC=8;AF=0.148;AN=54;BaseQRankSum=4.508;DP=490;FS=8.196;HRun=0;HaplotypeScore=196.0146;InbreedingCoeff=0.0417;MQ=52.02;MQ0=14;MQRankSum=-7.537;QD=17.26;ReadPosRankSum=-1.730;VQSLOD=1.2883;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:7:17.81:0,18,216	0/1:10,0:10:11.63:12,0,480	0/0:29,0:8:8.62:0,9,126	0/0:37,0:14:33.78:0,34,405	0/0:10,0:10:27.08:0,27,807	./.	1/1:3,0:3:5.75:30,6,0	0/0:27,0:26:66.21:0,66,1819	0/0:20,0:20:51.11:0,51,2016	0/0:17,0:17:48.16:0,48,1618	0/0:5,0:5:12.04:0,12,653	0/1:17,5:22:99:756,0,236	0/1:13,4:17:99:497,0,264	0/0:14,0:14:30.10:0,30,1277	0/0:30,0:25:54.62:0,55,1610	0/0:29,0:29:58.01:0,58,1820	0/0:16,0:16:22:0,22,1664	0/0:33,0:32:62.68:0,63,2784	0/0:4,0:2:2.93:0,3,139	0/0:6,0:6:15.05:0,15,602	0/0:44,0:43:79.10:0,79,4811	0/1:14,4:18:99:413,0,110	0/1:12,0:12:91.19:91,0,247	0/1:21,2:19:99:146,0,169	0/0:11,0:11:18.04:0,18,1043	0/0:17,0:17:39.13:0,39,1464	0/0:11,0:11:18.06:0,18,672	0/0:16,0:16:32.87:0,33,1559
chr10	51460788	.	AGGT	A	818.73	PASS	AB=0.892;AC=10;AF=0.185;AN=54;BaseQRankSum=8.572;DP=478;FS=15.045;HRun=0;HaplotypeScore=120.5620;InbreedingCoeff=-0.0392;MQ=52.15;MQ0=15;MQRankSum=-8.120;QD=5.46;ReadPosRankSum=-2.032;VQSLOD=1.2101;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:7:2.89:0,3,12	0/1:6,4:10:99:139,0,226	0/0:31,0:7:14.95:0,15,179	0/0:35,0:14:23.28:0,23,355	0/0:9,0:9:24.08:0,24,538	./.	1/1:3,0:3:5.88:37,6,0	0/0:26,0:25:72.10:0,72,1376	0/0:20,0:20:60.10:0,60,1179	0/0:16,0:16:48.13:0,48,986	0/0:5,0:5:15.03:0,15,305	0/1:22,0:22:99:195,0,120	0/1:16,2:18:99:150,0,113	0/0:12,0:12:30.10:0,30,646	0/1:28,2:25:33.21:33,0,779	0/0:28,1:29:27.42:0,27,1006	0/1:15,1:16:6.98:7,0,905	0/0:32,0:31:50.30:0,50,1334	0/0:4,0:2:2.04:0,2,72	0/0:6,0:6:15.05:0,15,336	0/0:43,0:42:99:0,121,2529	0/1:15,2:17:14.96:197,0,15	0/1:8,4:12:83.24:135,0,83	0/1:22,0:18:67:67,0,105	0/0:11,0:11:24.08:0,24,543	0/0:17,0:17:45.96:0,46,893	0/0:9,0:9:21:0,21,390	0/0:15,0:15:42.06:0,42,860
chr10	51460789	.	GGTA	G	768.87	PASS	AB=0.934;AC=10;AF=0.185;AN=54;BaseQRankSum=9.209;DP=483;FS=26.553;HRun=0;HaplotypeScore=121.5606;InbreedingCoeff=0.1560;MQ=52.12;MQ0=15;MQRankSum=-7.632;QD=6.86;ReadPosRankSum=-0.563;VQSLOD=1.3738;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:7,0:7:7.73:27,8,0	0/1:11,0:11:55.50:56,0,316	0/0:30,0:8:6.02:0,6,170	0/0:36,0:14:27.12:0,27,439	0/0:9,0:9:27.08:0,27,566	./.	1/1:2,1:3:6.02:68,6,0	0/0:27,0:26:69.24:0,69,1481	0/0:21,0:21:54.18:0,54,1148	0/0:16,0:16:48.16:0,48,1040	0/0:5,0:5:12.04:0,12,279	0/1:19,3:22:99:224,0,230	0/1:17,1:18:99:138,0,249	0/0:12,0:12:30.10:0,30,647	0/0:30,0:25:22.69:0,23,907	0/0:30,0:30:50.33:0,50,1184	0/0:15,0:16:10.82:0,11,888	0/0:32,1:31:42.28:0,42,1478	0/0:4,0:2:2.81:0,3,71	0/0:6,0:6:15.05:0,15,329	0/0:42,0:42:99:0,115,2499	0/1:15,2:17:83.76:231,0,84	0/1:11,1:12:88.45:88,0,215	0/1:21,1:18:80.31:80,0,164	0/0:11,0:11:26.58:0,27,564	0/0:17,0:17:35.50:0,35,780	0/0:9,0:9:18.06:0,18,384	0/0:15,0:15:36.08:0,36,823
chr10	51460963	.	G	GAGA	431.05	PASS	AB=0.717;AC=4;AF=0.071;AN=56;BaseQRankSum=5.873;DP=696;FS=5.548;HRun=0;HaplotypeScore=128.0524;InbreedingCoeff=0.4917;MQ=48.74;MQ0=25;MQRankSum=-5.147;QD=14.86;ReadPosRankSum=-0.815;VQSLOD=3.1043;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,5:9:12.04:280,12,0	0/0:15,0:15:33.01:0,33,482	0/0:37,0:7:17.79:0,18,160	0/0:36,0:2:6.02:0,6,111	0/0:14,0:13:35.15:0,35,593	0/1:4,2:5:40.74:60,0,41	0/1:7,5:12:5.10:201,0,5	0/0:31,0:27:62.92:0,63,771	0/0:34,0:32:93.25:0,93,1539	0/0:22,0:20:51.11:0,51,839	0/0:10,0:10:27.07:0,27,463	0/0:36,0:34:90.15:0,90,1465	0/0:36,0:33:83.91:0,84,1306	0/0:20,0:20:56.50:0,57,874	0/0:35,0:29:79.18:0,79,1195	0/0:41,0:40:99:0,105,1761	0/0:26,0:25:65.29:0,65,1157	0/0:38,0:35:81.05:0,81,1496	0/0:18,0:12:33.06:0,33,491	0/0:19,0:19:48.14:0,48,831	0/0:34,0:33:67.67:0,68,1533	0/0:21,0:21:52.96:0,53,881	0/0:25,0:25:65.82:0,66,1071	0/0:41,0:40:76.07:0,76,1311	0/0:18,0:18:51.13:0,51,829	0/0:27,0:28:72.15:0,72,1143	0/0:23,0:22:63.12:0,63,1010	0/0:8,0:5:15.05:0,15,278
chr10	51463357	.	G	GA	7244.10	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-17.172;DP=754;FS=5.635;HRun=7;HaplotypeScore=75.3061;InbreedingCoeff=0.9999;MQ=88.14;MQ0=0;MQRankSum=-1.690;QD=29.93;ReadPosRankSum=1.985;VQSLOD=5.3623;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,150,1449	1/1:2,12:14:30.09:362,30,0	0/0:26,0:26:43.10:0,43,440	0/0:27,0:27:69.06:0,69,648	0/0:15,0:15:42.07:0,42,405	0/0:29,0:29:69.08:0,69,660	0/0:27,0:27:78.10:0,78,746	0/0:32,0:32:78.11:0,78,753	0/0:28,0:28:78.09:0,78,745	0/0:21,0:21:57.09:0,57,547	0/0:25,0:25:69.10:0,69,661	1/1:7,24:31:72.22:863,72,0	1/1:1,26:27:69.21:825,69,0	0/0:38,0:38:90.10:0,90,862	1/1:2,35:37:93.29:1124,93,0	1/1:1,23:24:43.38:805,43,0	0/0:28,0:28:72.11:0,72,695	1/1:3,30:32:72.22:870,72,0	0/0:16,0:16:42.04:0,42,397	0/0:16,0:16:36.05:0,36,347	0/0:38,0:38:99:0,110,1035	1/1:1,26:27:78.20:926,78,0	1/1:3,19:22:51.59:600,52,0	1/1:3,24:27:72.22:870,72,0	0/0:23,0:23:69.10:0,69,659	0/0:29,0:29:81.12:0,81,778	0/0:20,0:19:57.09:0,57,550	0/0:22,0:22:57.09:0,57,550
chr10	51464563	.	A	ACAC	2706.99	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-6.981;DP=797;FS=4.487;HRun=0;HaplotypeScore=105.3606;InbreedingCoeff=0.9999;MQ=92.03;MQ0=0;MQRankSum=-5.814;QD=52.06;ReadPosRankSum=1.763;VQSLOD=5.8236;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,44:52:99:2802,132,0	0/0:21,0:21:54.16:0,54,855	0/0:28,0:28:72.20:0,72,1118	0/0:37,0:37:87.24:0,87,1323	0/0:31,0:31:93.32:0,93,1514	0/0:23,0:23:60.19:0,60,941	0/0:23,0:23:60.19:0,60,953	0/0:32,0:32:90.30:0,90,1444	0/0:36,0:36:99:0,105,1664	0/0:44,0:44:99:0,117,1887	0/0:15,0:15:45.14:0,45,704	0/0:30,0:30:81.28:0,81,1321	0/0:23,0:23:66.23:0,66,1074	0/0:20,0:20:57.18:0,57,904	0/0:47,0:46:99:0,138,2238	0/0:35,0:35:99:0,102,1666	0/0:28,0:28:69.23:0,69,1124	0/0:18,0:18:42.11:0,42,651	0/0:39,0:39:99:0,105,1684	0/0:23,0:23:66.23:0,66,1076	0/0:28,0:28:78.25:0,78,1241	0/0:17,0:17:45.15:0,45,726	0/0:23,0:23:63.21:0,63,1028	0/0:22,0:22:63.20:0,63,1005	0/0:24,0:24:66.23:0,66,1078	0/0:32,0:32:84.28:0,84,1348	0/0:24,0:23:69.22:0,69,1102	0/0:22,0:22:66.21:0,66,1045
chr10	51465537	.	T	TAAAG	1712.69	PASS	AB=0.625;AC=7;AF=0.146;AN=48;BaseQRankSum=-6.886;DP=570;FS=5.141;HRun=0;HaplotypeScore=132.5041;InbreedingCoeff=0.6599;MQ=66.66;MQ0=2;MQRankSum=3.393;QD=19.03;ReadPosRankSum=2.018;VQSLOD=3.2635;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:17.98:0,18,246	0/0:13,0:15:9.01:0,9,83	./.	./.	0/0:28,0:28:30.06:0,30,405	0/0:9,0:18:18.02:0,18,168	0/0:9,0:10:5.96:0,6,44	./.	0/0:22,0:22:18.03:0,18,229	0/0:30,0:30:33.08:0,33,457	0/0:21,0:21:15.05:0,15,226	0/0:9,0:14:14.90:0,15,120	0/0:16,0:22:11.93:0,12,100	1/1:14,7:22:15.05:346,15,0	0/0:10,0:25:26.87:0,27,229	0/0:13,0:18:11.83:0,12,82	0/0:24,0:24:19.07:0,19,447	0/0:22,0:24:5.96:0,6,56	0/0:20,0:18:12.02:0,12,158	0/0:26,0:26:33.03:0,33,410	0/0:6,0:11:6.01:0,6,56	0/0:18,0:20:3.27:0,3,14	0/0:9,0:15:13.51:0,14,92	./.	0/1:12,15:30:10.83:659,0,11	1/1:11,5:17:15.03:295,15,0	0/0:29,0:29:33.06:0,33,428	1/1:10,11:21:24.08:551,24,0
chr10	51466352	.	TTGTGTGTGTG	T	5932.86	PASS	AB=0.682;AC=17;AF=0.304;AN=56;BaseQRankSum=9.211;DP=767;FS=6.538;HRun=0;HaplotypeScore=224.2072;InbreedingCoeff=0.8586;MQ=58.07;MQ0=3;MQRankSum=-10.687;QD=24.72;ReadPosRankSum=4.677;VQSLOD=2.9963;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:45:50.87:0,51,1871	1/1:4,3:7:15.05:389,15,0	0/0:25,0:17:9.03:0,9,188	0/0:28,0:19:6.02:0,6,208	0/0:18,0:20:33.11:0,33,1472	0/0:17,0:26:11.84:0,12,408	0/0:26,0:33:18.06:0,18,544	0/0:28,0:28:39.11:0,39,921	0/0:24,0:26:45.15:0,45,1895	0/0:23,0:23:39.13:0,39,1497	0/0:15,0:17:27.09:0,27,996	1/1:13,18:31:45.15:1320,45,0	1/1:15,14:29:26.98:706,27,0	0/0:21,0:20:36.12:0,36,1380	1/1:15,11:26:21.07:632,21,0	1/1:16,20:37:48.15:1343,48,0	0/0:25,0:29:54.19:0,54,2109	0/1:16,13:30:99:232,0,155	0/0:28,0:29:52.02:0,52,1595	0/0:22,0:24:51.16:0,51,2126	0/0:58,0:63:99:0,114,4278	1/1:16,10:26:24.08:692,24,0	1/1:10,11:21:9.03:268,9,0	1/1:19,12:32:14.60:351,15,0	0/0:19,0:21:51.18:0,51,2181	0/0:33,0:34:68.60:0,69,2571	0/0:21,0:22:51.17:0,51,2036	0/0:9,0:9:9.03:0,9,411
chr10	51466661	.	GGTT	G	1602.13	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=8.588;DP=848;FS=1.322;HRun=0;HaplotypeScore=116.5710;InbreedingCoeff=0.9701;MQ=67.41;MQ0=1;MQRankSum=-0.784;QD=30.23;ReadPosRankSum=1.850;VQSLOD=4.1448;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,45:53:99:1697,111,0	0/0:12,0:12:33.11:0,33,688	0/0:32,0:25:64.70:0,65,1163	0/0:23,0:21:57.19:0,57,1030	0/0:29,0:29:84.29:0,84,1698	0/0:30,0:30:84.29:0,84,1681	0/0:45,0:45:99:0,126,2453	0/0:33,0:33:81.26:0,81,1531	0/0:30,0:30:81.28:0,81,1668	0/0:31,0:30:81.25:0,81,1556	0/0:18,0:18:51.18:0,51,1063	0/0:25,0:25:75.24:0,75,1534	0/0:31,0:31:75.24:0,75,1506	0/0:25,0:25:72.23:0,72,1409	0/0:48,0:48:99:0,135,2693	0/0:36,0:36:87.30:0,87,1792	0/0:39,0:39:99:0,99,2009	0/0:20,0:20:49.48:0,49,995	0/0:33,0:33:90.28:0,90,1733	0/0:33,0:33:93.11:0,93,1795	0/0:46,0:46:99:0,120,2504	0/0:22,0:22:60.15:0,60,1198	0/0:21,0:20:57.20:0,57,1177	0/0:39,0:39:99:0,105,2066	0/0:29,0:29:75.23:0,75,1432	0/0:35,0:35:81.27:0,81,1671	0/0:26,0:26:72.25:0,72,1470	0/0:4,0:4:12.04:0,12,250
chr10	51467569	.	ACAC	A	7783.13	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=17.638;DP=719;FS=0.692;HRun=0;HaplotypeScore=143.1437;InbreedingCoeff=0.9949;MQ=59.50;MQ0=1;MQRankSum=-11.607;QD=37.06;ReadPosRankSum=3.377;VQSLOD=5.3526;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:31:81.16:0,81,1558	1/1:0,7:5:15.05:250,15,0	0/0:29,0:26:75.25:0,75,1623	0/0:23,0:24:59.99:0,60,1234	0/0:21,0:21:63.20:0,63,1383	0/0:25,0:25:69.24:0,69,1559	0/0:19,0:19:57.18:0,57,1243	0/0:41,0:41:99:0,105,2321	0/0:22,0:22:66.22:0,66,1451	0/0:31,0:31:90.29:0,90,1924	0/0:25,0:25:72.20:0,72,1583	1/1:4,15:18:45.14:723,45,0	1/1:3,28:31:84.29:1396,84,0	0/0:16,0:16:48.16:0,48,1088	1/1:1,27:28:81.26:1322,81,0	1/1:5,31:36:99:1640,102,0	0/0:30,0:30:84.25:0,84,1832	1/1:6,24:28:66.23:1094,66,0	0/0:23,0:23:66.21:0,66,1414	0/0:40,0:40:99:0,111,2421	0/0:42,0:42:99:0,123,2712	1/1:2,17:11:18.06:299,18,0	1/1:1,21:12:30.10:499,30,0	1/1:1,17:17:36.11:561,36,0	0/0:21,0:21:63.22:0,63,1419	0/0:29,0:29:81.28:0,81,1832	0/0:30,0:30:87.30:0,87,1968	0/0:8,0:8:18.06:0,18,408
chr10	51467614	.	A	AAT	6709.87	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=9.446;DP=647;FS=2.229;HRun=0;HaplotypeScore=100.5520;InbreedingCoeff=0.9382;MQ=46.67;MQ0=36;MQRankSum=-10.369;QD=32.26;ReadPosRankSum=0.479;VQSLOD=7.0183;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:23:48.11:0,48,646	1/1:0,7:5:9.03:164,9,0	0/0:19,0:5:3.01:0,3,43	0/0:18,0:6:9.03:0,9,117	0/0:31,0:31:78.03:0,78,1082	0/0:26,0:26:63.21:0,63,901	0/0:19,0:19:54.13:0,54,728	0/0:26,0:26:66.17:0,66,892	0/0:18,0:18:48.16:0,48,687	0/0:22,0:22:57.18:0,57,800	0/0:22,0:22:66.19:0,66,923	1/1:3,18:20:27.09:492,27,0	1/1:6,23:29:54.18:984,54,0	0/0:16,0:16:45.15:0,45,644	1/1:0,23:24:60.21:1093,60,0	1/1:1,36:31:81.28:1458,81,0	0/0:27,0:27:63.11:0,63,852	1/1:5,11:16:39.13:697,39,0	0/0:17,0:17:48.15:0,48,672	0/0:35,0:32:81.24:0,81,1124	0/0:30,0:30:51.27:0,51,1007	1/1:2,21:18:42.06:725,42,0	1/1:5,25:20:21.03:383,21,0	1/1:3,16:15:40.69:714,41,0	0/0:29,0:29:66.22:0,66,944	0/0:26,0:26:78.26:0,78,1116	0/0:29,0:28:72.15:0,72,1005	0/0:3,0:3:6.02:0,6,86
chr10	51468941	.	A	AG	11924.75	PASS	AB=0.929;AC=51;AF=0.944;AN=54;BaseQRankSum=-1.647;DP=343;FS=32.219;HRun=1;HaplotypeScore=132.3997;InbreedingCoeff=0.6032;MQ=53.46;MQ0=4;MQRankSum=-2.683;QD=36.03;ReadPosRankSum=1.253;VQSLOD=2.3392;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,24:28:57.19:844,57,0	1/1:1,4:5:12.04:175,12,0	0/0:11,0:7:14.94:0,15,146	0/1:12,1:9:20.09:20,0,143	1/1:0,9:9:24.08:349,24,0	1/1:0,10:10:30.10:449,30,0	1/1:2,13:15:39.09:558,39,0	1/1:0,16:16:48.14:679,48,0	1/1:1,14:14:36.12:538,36,0	1/1:2,10:12:36.12:524,36,0	1/1:0,6:6:15.05:224,15,0	1/1:0,14:14:42.14:628,42,0	1/1:0,11:11:30.10:449,30,0	1/1:2,9:11:30.06:418,30,0	1/1:1,16:17:51.13:738,51,0	1/1:0,10:10:30.10:449,30,0	1/1:0,16:16:36.12:539,36,0	1/1:1,12:13:33.11:494,33,0	1/1:2,19:20:60.16:872,60,0	1/1:1,7:8:18.02:244,18,0	1/1:0,21:21:36.04:488,36,0	1/1:1,12:13:33.03:444,33,0	1/1:0,8:8:21.07:314,21,0	1/1:1,11:12:30.06:424,30,0	1/1:0,13:13:33.11:493,33,0	1/1:1,5:6:18.06:255,18,0	1/1:0,7:7:21.07:314,21,0	./.
chr10	51468961	.	T	TC	7871.18	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-0.484;DP=261;FS=55.109;HRun=2;HaplotypeScore=151.5668;InbreedingCoeff=0.6241;MQ=51.11;MQ0=1;MQRankSum=-3.630;QD=31.61;ReadPosRankSum=3.298;VQSLOD=0.1215;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,17:20:45.15:646,45,0	1/1:0,4:4:9.03:129,9,0	0/0:3,0:2:3:0,3,28	0/0:8,0:7:11.57:0,12,84	1/1:3,2:5:6.02:86,6,0	1/1:2,7:9:18.06:259,18,0	1/1:3,9:12:29.98:362,30,0	1/1:4,11:15:33.10:474,33,0	1/1:1,12:13:33.11:474,33,0	1/1:2,8:10:27.09:388,27,0	1/1:0,3:3:6.02:86,6,0	1/1:1,14:15:45.11:623,45,0	1/1:1,11:12:27.09:388,27,0	1/1:1,9:10:24.08:338,24,0	1/1:1,14:15:39.11:538,39,0	1/1:1,6:7:18.06:259,18,0	1/1:1,7:8:15.05:216,15,0	1/1:2,6:8:21.03:279,21,0	1/1:3,8:10:24.08:345,24,0	1/1:1,6:7:21.07:286,21,0	1/1:2,16:17:27.08:356,27,0	1/1:0,9:9:15.05:215,15,0	1/1:1,4:5:6.02:86,6,0	1/1:3,4:7:12.04:162,12,0	1/1:2,5:7:18.06:248,18,0	1/1:2,5:7:15.05:206,15,0	1/1:2,9:11:26.41:382,26,0	1/1:0,1:1:3.01:43,3,0
chr10	51468970	.	G	GC	1131.68	PASS	AB=0.989;AC=42;AF=0.778;AN=54;BaseQRankSum=4.515;DP=227;FS=11.043;HRun=0;HaplotypeScore=151.6129;InbreedingCoeff=-0.0409;MQ=47.27;MQ0=0;MQRankSum=-0.151;QD=5.12;ReadPosRankSum=5.670;VQSLOD=2.1841;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:16,0:16:70.56:75,0,71	1/1:4,0:4:7.03:36,7,0	./.	0/0:5,0:4:3.01:0,3,37	1/1:2,2:4:8.77:66,9,0	0/1:7,0:7:21.30:37,0,21	0/1:9,0:9:20.08:24,0,20	0/1:11,0:11:2.19:21,0,2	0/1:11,0:11:13.64:38,0,14	1/1:9,1:10:19.76:67,20,0	1/1:2,0:2:5.62:29,6,0	0/1:15,0:15:3.19:66,0,3	1/1:11,0:11:21.73:80,22,0	1/1:9,0:9:19.14:68,19,0	0/1:15,0:15:4.47:79,0,4	0/1:7,0:7:10.22:10,0,44	1/1:8,0:8:8.70:24,9,0	1/1:7,0:7:7.85:20,8,0	1/1:9,1:10:17.77:65,18,0	1/1:5,2:7:19:120,19,0	1/1:15,0:14:24.44:100,24,0	0/1:7,1:8:22.54:34,0,23	0/1:4,0:4:2.59:3,0,30	1/1:6,0:6:7.20:26,7,0	1/1:7,0:7:14.42:50,14,0	1/1:6,0:6:12.53:58,13,0	1/1:11,0:11:22.06:76,22,0	1/1:1,0:1:1.25:3,1,0
chr10	51468971	.	A	AC	7896.16	PASS	AC=52;AF=0.963;AN=54;BaseQRankSum=-1.597;DP=234;FS=22.529;HRun=1;HaplotypeScore=139.1552;InbreedingCoeff=0.3963;MQ=46.83;MQ0=0;MQRankSum=-1.732;QD=34.63;ReadPosRankSum=0.261;VQSLOD=2.7329;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,15:16:36.12:538,36,0	1/1:2,2:4:9.03:130,9,0	./.	0/0:5,0:4:3:0,3,28	1/1:2,2:4:9.03:134,9,0	1/1:2,5:7:15.05:224,15,0	1/1:2,7:9:21.07:314,21,0	1/1:1,10:11:27.55:405,28,0	1/1:0,11:11:27.09:404,27,0	1/1:1,9:10:30.10:449,30,0	1/1:0,2:2:6.02:89,6,0	1/1:1,15:16:42.57:604,43,0	1/1:1,11:12:27.09:404,27,0	1/1:2,8:10:24.08:359,24,0	1/1:1,14:15:36.12:534,36,0	1/1:0,6:6:12:155,12,0	1/1:1,7:8:18.02:244,18,0	1/1:0,7:7:21.07:314,21,0	1/1:2,9:11:30.10:449,30,0	1/1:2,5:7:21.07:312,21,0	1/1:2,14:15:30.04:448,30,0	1/1:3,5:8:12.04:179,12,0	1/1:2,2:4:3.01:45,3,0	1/1:2,6:8:9.34:135,9,0	1/1:0,7:7:18.05:269,18,0	1/1:1,6:7:18.06:265,18,0	1/1:0,11:11:30.10:448,30,0	1/1:0,1:1:3.01:45,3,0
chr10	51468985	.	A	AC	1042.13	PASS	AB=0.979;AC=44;AF=0.846;AN=52;BaseQRankSum=2.575;DP=214;FS=12.632;HRun=1;HaplotypeScore=146.4432;InbreedingCoeff=0.0307;MQ=44.93;MQ0=0;MQRankSum=-0.569;QD=5.03;ReadPosRankSum=5.092;VQSLOD=-0.7310;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:14,0:14:16.97:34,0,17	1/1:2,0:2:5.04:33,5,0	./.	0/0:5,0:4:3:0,3,28	1/1:3,0:3:8.01:37,8,0	1/1:6,1:7:14.14:54,14,0	0/1:8,0:8:9.95:15,0,10	1/1:13,0:12:18.42:55,18,0	1/1:9,0:9:17.76:56,18,0	0/1:8,0:8:4.95:18,0,5	1/1:4,0:4:4.97:18,5,0	1/1:14,0:14:32.87:121,33,0	1/1:10,0:10:24.10:101,24,0	0/1:9,0:9:1.23:47,0,1	1/1:12,0:12:23.07:83,23,0	1/1:6,0:6:14.89:60,15,0	0/1:7,0:7:22.39:22,0,23	1/1:8,0:8:12.34:38,12,0	1/1:15,0:15:7.91:57,8,0	0/1:6,1:7:39.43:39,0,53	1/1:12,0:12:20.30:69,20,0	1/1:5,0:5:9.33:31,9,0	./.	1/1:7,1:8:3.37:15,3,0	1/1:7,0:7:10.40:42,10,0	1/1:5,0:5:9.53:27,10,0	1/1:12,1:13:24.18:91,24,0	1/1:1,0:1:1.55:4,2,0
chr10	51468986	.	A	AC	7786.37	PASS	AC=50;AF=0.962;AN=52;BaseQRankSum=-3.328;DP=224;FS=19.614;HRun=1;HaplotypeScore=138.0413;InbreedingCoeff=0.4182;MQ=44.34;MQ0=0;MQRankSum=0.382;QD=35.88;ReadPosRankSum=2.874;VQSLOD=2.9060;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,12:14:21.07:314,21,0	1/1:0,2:2:6.02:88,6,0	./.	0/0:5,0:4:3.01:0,3,31	1/1:2,3:5:8.35:132,8,0	1/1:1,6:7:20.86:276,21,0	1/1:3,6:9:16.60:213,17,0	1/1:2,13:14:39.09:552,39,0	1/1:1,8:9:27.09:395,27,0	1/1:2,7:9:21.07:314,21,0	1/1:2,4:6:7.86:97,8,0	1/1:0,14:14:42.14:625,42,0	1/1:0,10:10:30.10:447,30,0	1/1:0,9:9:26.45:367,26,0	1/1:0,11:11:33.11:483,33,0	1/1:0,6:6:18.06:268,18,0	1/1:1,6:7:15.05:224,15,0	1/1:0,8:8:24.08:358,24,0	1/1:1,15:16:42.10:603,42,0	1/1:4,4:8:6.77:213,7,0	1/1:0,12:12:27.09:379,27,0	1/1:2,4:6:11.97:179,12,0	./.	1/1:1,7:8:9.03:124,9,0	1/1:0,7:7:21.07:298,21,0	1/1:0,5:5:15.05:224,15,0	1/1:1,12:13:39.13:568,39,0	1/1:0,1:1:3.01:45,3,0
chr10	51468997	.	T	TC	5695.64	PASS	AB=0.500;AC=51;AF=0.981;AN=52;DP=201;FS=0.000;HRun=1;HaplotypeScore=115.1578;InbreedingCoeff=0.1400;MQ=33.82;MQ0=0;QD=28.62;VQSLOD=4.5026;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,9:9:15.05:217,15,0	1/1:0,2:2:5.98:65,6,0	./.	./.	0/1:0,5:5:0:0,0,0	1/1:2,4:6:12.04:180,12,0	1/1:0,7:7:18.06:269,18,0	1/1:6,12:17:48.08:663,48,0	1/1:2,7:9:21.07:314,21,0	1/1:2,8:10:30.06:423,30,0	1/1:1,5:6:6.02:90,6,0	1/1:2,12:14:30.10:449,30,0	1/1:1,9:10:15.05:223,15,0	1/1:3,5:8:6.02:90,6,0	1/1:3,7:10:12.04:180,12,0	1/1:0,5:5:15.05:224,15,0	1/1:0,6:6:9.03:135,9,0	1/1:1,7:8:18.06:270,18,0	1/1:1,14:15:42.14:618,42,0	1/1:0,6:6:6.02:90,6,0	1/1:0,9:9:7.27:93,7,0	1/1:0,4:4:12.04:179,12,0	1/1:0,1:1:3.01:45,3,0	1/1:0,5:5:6.02:90,6,0	1/1:0,6:6:9.03:135,9,0	1/1:1,4:5:15.05:215,15,0	1/1:2,12:14:27.09:398,27,0	1/1:0,1:1:3.01:45,3,0
chr10	51470474	.	TTTG	T	1429.58	PASS	AB=0.933;AC=19;AF=0.339;AN=56;BaseQRankSum=11.577;DP=592;FS=3.543;HRun=0;HaplotypeScore=104.8344;InbreedingCoeff=0.7612;MQ=77.44;MQ0=4;MQRankSum=-1.801;QD=6.62;ReadPosRankSum=0.187;VQSLOD=2.8239;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:37,0:37:69.74:70,0,387	0/1:3,1:4:17.57:57,0,18	0/0:39,0:26:44.86:0,45,558	0/1:26,0:17:44.05:44,0,142	0/0:23,0:23:63.17:0,63,1156	0/0:13,0:13:35.48:0,35,678	0/0:20,0:20:57.12:0,57,982	0/0:29,0:29:68.70:0,69,1212	0/0:12,0:12:33.08:0,33,621	0/0:20,0:20:53.99:0,54,808	0/0:22,0:22:66.11:0,66,1212	1/1:15,2:17:37.31:270,37,0	1/1:15,0:15:33.65:177,34,0	0/0:21,0:21:57.10:0,57,930	1/1:20,0:20:25.88:141,26,0	1/1:17,3:20:25.26:238,25,0	0/0:29,0:29:75.10:0,75,1364	1/1:26,0:26:38.88:183,39,0	0/0:19,0:19:53.69:0,54,732	0/0:17,0:17:48.14:0,48,866	0/0:16,0:16:43.84:0,44,650	1/1:16,1:16:36.98:207,37,0	1/1:21,0:21:33.02:159,33,0	1/1:13,0:13:21.49:94,21,0	0/0:24,0:23:72.16:0,72,1296	0/0:28,0:28:80.92:0,81,1208	0/0:30,0:30:87.17:0,87,1503	0/0:14,0:14:42.09:0,42,718
chr10	51470475	.	TTG	T	3902.71	PASS	AB=0.987;AC=20;AF=0.357;AN=56;BaseQRankSum=10.337;DP=599;FS=0.372;HRun=0;HaplotypeScore=85.9656;InbreedingCoeff=0.8037;MQ=75.26;MQ0=4;MQRankSum=-1.275;QD=17.98;ReadPosRankSum=-0.507;VQSLOD=3.3809;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:36,1:37:99:201,0,113	1/1:3,2:5:0.21:120,0,0	0/0:36,0:23:37.09:0,37,437	0/1:26,0:17:31.26:31,0,117	0/0:23,0:23:63.15:0,63,948	0/0:14,0:14:30.53:0,31,550	0/0:20,0:20:56.94:0,57,789	0/0:31,0:31:74.58:0,75,1043	0/0:12,0:12:32.82:0,33,488	0/0:21,0:21:56.83:0,57,708	0/0:22,0:22:66.12:0,66,980	1/1:11,6:17:50.64:521,51,0	1/1:9,6:15:42.50:496,43,0	0/0:21,0:21:56.99:0,57,721	1/1:3,17:20:32.93:395,33,0	1/1:4,16:20:26.60:297,27,0	0/0:30,0:30:78.04:0,78,1121	1/1:2,24:26:41.99:528,42,0	0/0:21,0:21:42.91:0,43,631	0/0:19,0:19:54.13:0,54,758	0/0:16,0:16:43.57:0,44,542	1/1:2,15:16:41.98:493,42,0	1/1:1,20:21:36.01:493,36,0	1/1:2,11:13:23.93:328,24,0	0/0:24,0:23:72.16:0,72,1052	0/0:28,0:28:80.89:0,81,1015	0/0:30,0:30:87.17:0,87,1229	0/0:14,0:14:41.93:0,42,574
chr10	51470476	.	TG	T	2682.60	PASS	AB=0.958;AC=21;AF=0.375;AN=56;BaseQRankSum=12.592;DP=588;FS=3.155;HRun=1;HaplotypeScore=77.6532;InbreedingCoeff=0.9154;MQ=74.17;MQ0=4;MQRankSum=-1.306;QD=12.59;ReadPosRankSum=-0.623;VQSLOD=2.1464;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:34,2:36:66.47:595,66,0	1/1:5,0:5:11.53:85,12,0	0/0:35,1:23:15.66:0,16,297	0/1:22,1:15:86.68:87,0,92	0/0:21,0:21:63.07:0,63,720	0/0:13,0:13:38.84:0,39,449	0/0:20,0:20:52.92:0,53,594	0/0:30,0:30:77.54:0,78,873	0/0:11,0:11:20.98:0,21,350	0/0:20,0:20:55.13:0,55,572	0/0:22,0:22:66.11:0,66,764	1/1:16,1:17:50.15:393,50,0	1/1:12,3:15:43.33:338,43,0	0/0:21,0:21:54.80:0,55,534	1/1:17,3:20:32.79:257,33,0	1/1:19,1:20:26.45:171,26,0	0/0:29,0:29:77.99:0,78,881	1/1:24,2:26:41.59:284,42,0	0/0:20,0:20:31.97:0,32,482	0/0:20,0:20:57.09:0,57,625	0/0:17,0:17:41.67:0,42,438	1/1:16,1:16:41.60:283,42,0	1/1:20,1:21:35.70:247,36,0	1/1:11,2:13:22.86:163,23,0	0/0:24,0:23:72.13:0,72,831	0/0:27,0:27:78.78:0,79,820	0/0:30,0:30:89.50:0,89,986	0/0:14,0:14:36.94:0,37,430
chr10	51473361	.	GCA	G	449.20	PASS	AB=0.900;AC=12;AF=0.214;AN=56;BaseQRankSum=2.764;DP=637;FS=2.248;HRun=0;HaplotypeScore=116.6010;InbreedingCoeff=-0.1748;MQ=55.93;MQ0=18;MQRankSum=1.697;QD=1.66;ReadPosRankSum=0.914;VQSLOD=2.2260;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:23:9.61:0,10,62	0/0:9,0:11:5.68:0,6,37	0/0:38,0:8:0.47:0,0,1	0/0:39,0:5:4.23:0,4,26	0/1:19,2:21:0.79:1,0,385	0/0:10,0:21:23.99:0,24,209	0/0:9,0:22:26.99:0,27,236	0/1:27,2:29:40.51:41,0,274	0/1:18,1:20:3.09:3,0,527	0/1:26,0:26:2.83:3,0,509	0/0:17,2:19:2.04:0,2,431	0/0:18,0:21:12.33:0,12,83	0/0:23,0:31:29.67:0,30,251	0/0:14,0:14:25:0,25,517	0/0:12,0:24:23.19:0,23,136	0/1:14,0:14:0.04:0,0,0	0/1:19,5:24:99:116,0,520	0/0:10,0:14:20.67:0,21,168	0/1:17,1:17:10.03:10,0,271	0/1:30,2:32:99:113,0,596	0/1:20,10:30:99:130,0,393	0/0:17,0:20:0.47:0,0,2	0/0:15,0:17:5.88:0,6,42	0/0:17,0:16:3:0,3,25	0/0:28,3:31:28.52:0,29,849	0/1:15,2:17:31.14:31,0,382	0/1:18,4:24:87.17:87,0,653	0/1:11,2:13:41.22:41,0,254
chr10	51473989	.	A	AG	202.89	PASS	AB=0.952;AC=3;AF=0.054;AN=56;BaseQRankSum=-0.533;DP=580;FS=9.337;HRun=0;HaplotypeScore=86.4848;InbreedingCoeff=0.5729;MQ=60.45;MQ0=28;MQRankSum=2.680;QD=5.07;ReadPosRankSum=1.944;VQSLOD=2.5568;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,1:32:68.65:0,69,576	0/0:9,0:9:20.85:0,21,161	0/0:36,0:4:8.94:0,9,66	0/0:37,0:13:13.26:0,13,184	0/0:23,0:22:57.66:0,58,509	0/1:19,1:19:12.33:152,0,12	1/1:17,3:19:10.89:150,11,0	0/0:22,0:21:44.50:0,45,342	0/0:14,0:14:29.99:0,30,290	0/0:24,0:24:54.81:0,55,475	0/0:17,0:17:47.84:0,48,370	0/0:14,0:14:37.74:0,38,253	0/0:23,0:22:48.63:0,49,327	0/0:19,0:18:44.54:0,45,368	0/0:14,0:14:37.63:0,38,288	0/0:17,0:14:38.01:0,38,279	0/0:22,0:22:59.96:0,60,430	0/0:24,0:24:54.59:0,55,366	0/0:22,0:20:56.14:0,56,450	0/0:23,0:23:59.74:0,60,486	0/0:3,0:3:8.78:0,9,61	0/0:9,0:9:19.04:0,19,137	0/0:13,0:13:33.12:0,33,227	0/0:22,0:21:41.17:0,41,313	0/0:26,0:26:34.72:0,35,293	0/0:24,0:24:61.54:0,62,495	0/0:28,0:27:77.71:0,78,582	0/0:20,0:18:52.90:0,53,457
chr10	51475487	.	TA	T	420.22	PASS	AB=0.958;AC=7;AF=0.125;AN=56;BaseQRankSum=5.566;DP=472;FS=3.089;HRun=12;HaplotypeScore=50.8109;InbreedingCoeff=0.5029;MQ=67.53;MQ0=2;MQRankSum=0.044;QD=5.19;ReadPosRankSum=-1.006;VQSLOD=1.1946;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,1:25:33.84:0,34,510	0/0:11,0:11:20.83:0,21,178	0/1:21,0:13:14.91:15,0,75	0/1:9,0:6:18.13:18,0,49	0/0:19,0:19:42.08:0,42,426	1/1:2,12:14:29.88:232,30,0	1/1:5,11:16:35.84:278,36,0	0/0:25,1:26:39.88:0,40,581	0/0:14,0:14:39.06:0,39,389	0/0:13,0:13:30.06:0,30,304	0/0:19,3:22:10.62:0,11,460	0/0:16,1:17:21.85:0,22,403	0/0:15,0:15:36.01:0,36,337	0/0:11,0:11:29.98:0,30,291	0/0:19,0:20:50.93:0,51,496	0/0:9,0:10:29.89:0,30,283	0/1:18,3:21:18.52:19,0,368	0/0:23,2:25:36.87:0,37,548	0/0:16,0:16:31.61:0,32,308	0/0:21,1:22:33.85:0,34,513	0/0:9,0:9:27.05:0,27,274	0/0:15,1:17:21.68:0,22,380	0/0:14,0:15:33.04:0,33,327	0/0:6,0:6:18.04:0,18,183	0/0:23,1:24:39.82:0,40,564	0/0:20,0:20:42.07:0,42,420	0/0:14,0:14:33.07:0,33,335	0/0:19,1:20:24.86:0,25,433
chr10	51476494	.	AGCTG	A	3393.50	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.960;DP=545;FS=1.092;HRun=0;HaplotypeScore=89.7485;InbreedingCoeff=0.9606;MQ=71.50;MQ0=0;MQRankSum=-2.526;QD=49.90;ReadPosRankSum=1.480;VQSLOD=4.4418;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:54.19:0,54,1487	0/0:9,0:9:24.08:0,24,671	0/0:10,0:10:17.99:0,18,422	0/0:8,0:8:18.04:0,18,406	0/0:14,0:14:36.12:0,36,973	1/1:0,18:18:45.15:898,45,0	1/1:1,49:50:99:2495,126,0	0/0:20,0:20:45.15:0,45,1150	0/0:14,0:14:42.14:0,42,1152	0/0:15,0:15:42.14:0,42,1150	0/0:6,0:6:15.05:0,15,396	0/0:36,0:36:99:0,105,2914	0/0:19,0:19:57.20:0,57,1582	0/0:31,0:31:93.32:0,93,2565	0/0:22,0:22:63.22:0,63,1750	0/0:10,0:10:30.10:0,30,839	0/0:42,0:42:99:0,126,3431	0/0:20,0:20:60.21:0,60,1664	0/0:19,0:19:54.15:0,54,1432	0/0:9,0:9:27.09:0,27,694	0/0:54,0:54:99:0,151,4067	0/0:7,0:7:21.07:0,21,588	0/0:6,0:6:18.06:0,18,503	0/0:45,0:45:99:0,135,3649	0/0:11,0:11:33.10:0,33,841	0/0:12,0:12:36.12:0,36,984	0/0:15,0:15:42.13:0,42,1052	0/0:4,0:4:12.04:0,12,317
chr10	51476848	.	CG	C	1667.12	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.260;DP=730;FS=3.503;HRun=1;HaplotypeScore=75.2808;InbreedingCoeff=0.9619;MQ=89.69;MQ0=0;MQRankSum=-5.644;QD=37.05;ReadPosRankSum=2.218;VQSLOD=4.3583;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,45:45:99:1762,126,0	0/0:14,0:14:42.12:0,42,645	0/0:28,0:28:53.44:0,53,996	0/0:26,0:27:49.25:0,49,904	0/0:22,0:22:66.23:0,66,1052	0/0:17,0:17:51.17:0,51,793	0/0:27,0:27:78.27:0,78,1238	0/0:33,0:33:96.28:0,96,1484	0/0:30,0:30:90.27:0,90,1404	0/0:29,0:29:84.21:0,84,1267	0/0:6,0:6:15.05:0,15,237	0/0:46,0:46:99:0,138,2156	0/0:19,0:19:57.19:0,57,903	0/0:31,0:31:93.24:0,93,1415	0/0:29,0:29:87.28:0,87,1362	0/0:29,0:29:87.26:0,87,1361	0/0:37,0:37:99:0,111,1717	0/0:30,0:30:90.31:0,90,1426	0/0:18,0:18:54.16:0,54,836	0/0:22,0:22:63.21:0,63,1000	0/0:42,0:42:99:0,126,1982	0/0:20,0:20:60.14:0,60,885	0/0:6,0:6:18.06:0,18,283	0/0:35,0:35:99:0,99,1554	0/0:31,0:31:90.30:0,90,1406	0/0:27,0:27:81.27:0,81,1268	0/0:25,0:25:75.26:0,75,1193	0/0:5,0:5:15.05:0,15,240
chr10	51477358	.	CCTA	C	1803.34	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.003;DP=735;FS=9.775;HRun=0;HaplotypeScore=100.8339;InbreedingCoeff=0.9976;MQ=94.80;MQ0=0;MQRankSum=-3.623;QD=34.03;ReadPosRankSum=0.447;VQSLOD=4.0001;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,144,3163	0/0:7,0:7:21.07:0,21,468	0/0:28,0:28:66.23:0,66,1425	0/0:39,1:40:65.44:0,65,1945	0/0:19,0:19:54.19:0,54,1206	1/1:0,20:20:54.18:881,54,0	1/1:3,29:33:66.63:1044,67,0	0/0:33,0:33:87.30:0,87,1839	0/0:31,0:31:90.31:0,90,1998	0/0:36,0:36:99:0,108,2343	0/0:24,0:24:72.23:0,72,1518	0/0:25,0:25:66.23:0,66,1473	0/0:27,0:27:78.25:0,78,1668	0/0:33,0:33:96.33:0,96,2088	0/0:24,0:23:72.25:0,72,1559	0/0:22,0:22:60.21:0,60,1341	0/0:27,0:27:81.26:0,81,1719	0/0:22,0:22:60.21:0,60,1295	0/0:20,0:20:54.19:0,54,1196	0/0:21,0:21:57.20:0,57,1271	0/0:33,0:33:90.31:0,90,1964	0/0:16,0:16:48.16:0,48,1072	0/0:23,0:23:69.24:0,69,1502	0/0:33,0:33:96.33:0,96,2118	0/0:26,0:26:75.26:0,75,1659	0/0:25,0:25:72.25:0,72,1599	0/0:27,0:27:72.25:0,72,1589	0/0:10,0:10:30.10:0,30,670
chr10	51478752	.	CG	C	1146.82	PASS	AB=0.900;AC=10;AF=0.179;AN=56;BaseQRankSum=-0.012;DP=322;FS=7.213;HRun=9;HaplotypeScore=40.2830;InbreedingCoeff=0.5388;MQ=73.68;MQ0=0;MQRankSum=-0.296;QD=12.47;ReadPosRankSum=2.792;VQSLOD=2.2300;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,23:25:48.02:439,48,0	0/0:2,0:2:0.89:0,1,2	0/0:15,0:12:13.65:0,14,110	0/0:26,0:18:30.07:0,30,321	0/0:7,0:7:15.03:0,15,164	1/1:3,10:13:18:165,18,0	1/1:2,31:33:72.04:658,72,0	0/1:12,0:12:12.68:13,0,92	0/0:10,0:10:24.50:0,25,263	0/0:8,0:8:15.04:0,15,165	0/0:8,0:8:24.06:0,24,268	0/0:10,0:13:10.09:0,10,99	0/0:5,0:5:5.02:0,5,30	0/0:11,0:11:24.05:0,24,260	0/0:6,0:8:11.67:0,12,85	0/0:7,0:7:1.25:0,1,3	0/0:28,0:28:78.22:0,78,889	0/0:3,0:11:8.66:0,9,51	0/1:3,1:4:18.43:18,0,60	0/0:3,0:3:6.02:0,6,69	0/0:14,0:14:30.08:0,30,335	1/1:5,0:5:0.47:1,0,0	0/0:7,0:7:5.74:0,6,37	0/0:3,0:6:6.72:0,7,40	0/0:4,0:4:9.01:0,9,95	0/0:9,0:9:12.04:0,12,139	0/0:20,1:22:20.62:0,21,451	0/0:5,0:5:15.04:0,15,173
chr10	51479242	.	G	GA	1197.88	PASS	AB=0.943;AC=5;AF=0.089;AN=56;BaseQRankSum=4.026;DP=576;FS=0.577;HRun=9;HaplotypeScore=99.1611;InbreedingCoeff=0.7660;MQ=79.74;MQ0=1;MQRankSum=-3.839;QD=15.16;ReadPosRankSum=-1.819;VQSLOD=3.3710;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:42.36:0,42,362	0/0:12,0:11:26.99:0,27,234	0/0:20,0:17:11.87:0,12,116	0/1:30,0:22:36.66:37,0,118	0/0:24,0:24:47.92:0,48,417	1/1:7,18:25:66.10:696,66,0	1/1:3,18:21:54.14:595,54,0	0/0:23,0:24:43.63:0,44,367	0/0:23,0:23:53.96:0,54,469	0/0:18,0:18:38.97:0,39,337	0/0:14,0:14:32.97:0,33,282	0/0:20,0:20:41.95:0,42,367	0/0:17,0:17:35.96:0,36,310	0/0:18,0:18:36.39:0,36,303	0/0:24,0:24:57.36:0,57,496	0/0:16,0:16:32.96:0,33,282	0/0:15,0:15:32.90:0,33,279	0/0:18,0:18:35.96:0,36,312	0/0:25,0:25:67.52:0,68,574	0/0:21,0:21:50.95:0,51,443	0/0:10,0:10:17.99:0,18,156	0/0:18,0:19:47:0,47,390	0/0:17,0:17:35.98:0,36,318	0/0:22,0:22:44.96:0,45,391	0/0:28,0:28:61.71:0,62,542	0/0:23,0:23:50.96:0,51,442	0/0:25,0:25:59.98:0,60,520	0/0:18,0:18:42.03:0,42,348
chr10	51479268	.	CTT	C	1828.12	PASS	AB=0.773;AC=22;AF=0.393;AN=56;BaseQRankSum=7.397;DP=618;FS=7.478;HRun=16;HaplotypeScore=102.0735;InbreedingCoeff=0.8478;MQ=77.42;MQ0=5;MQRankSum=-3.984;QD=8.02;ReadPosRankSum=5.875;VQSLOD=0.9723;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:32:74.46:0,74,832	1/1:3,7:10:20.70:162,21,0	0/0:39,0:22:23.31:0,23,141	0/0:40,0:22:13.95:0,14,149	0/0:23,0:25:58.86:0,59,664	1/1:6,0:21:38.26:163,38,0	1/1:5,0:21:46.39:196,46,0	0/1:20,2:26:6.38:6,0,350	0/0:17,0:18:44.46:0,44,526	0/0:18,1:21:13.68:0,14,346	0/0:12,0:17:45.09:0,45,510	1/1:4,9:16:20.29:190,20,0	0/1:10,1:19:4.87:5,0,55	0/0:13,1:18:12.62:0,13,328	1/1:10,17:32:55.46:410,55,0	1/1:6,10:18:32.29:249,32,0	0/0:21,0:23:47.47:0,47,554	1/1:10,7:18:16.09:134,16,0	0/0:25,0:27:49.83:0,50,553	0/0:27,1:30:39.64:0,40,609	0/0:10,1:13:5.86:0,6,303	1/1:5,7:14:11.44:128,11,0	1/1:5,8:14:26.28:199,26,0	1/1:7,11:18:23.67:200,24,0	0/0:28,0:32:69.65:0,70,788	0/0:18,0:20:44.44:0,44,475	0/0:20,0:23:50.41:0,50,529	0/0:9,0:12:32.46:0,32,379
chr10	51479569	.	CCAGA	C	2404.02	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=2.867;DP=815;FS=0.000;HRun=0;HaplotypeScore=147.7434;InbreedingCoeff=0.9995;MQ=87.32;MQ0=0;MQRankSum=-5.207;QD=44.52;ReadPosRankSum=-0.502;VQSLOD=3.9985;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,141,3729	0/0:10,0:10:30.10:0,30,775	0/0:28,0:28:84.26:0,84,2113	0/0:28,0:28:81.28:0,81,2079	0/0:20,0:20:60.21:0,60,1552	1/1:0,15:15:36.12:683,36,0	1/1:0,39:39:99:1842,99,0	0/0:32,0:32:81.28:0,81,2096	0/0:37,0:37:99:0,111,2968	0/0:29,0:29:84.28:0,84,2154	0/0:14,0:14:42.14:0,42,1034	0/0:24,0:24:66.23:0,66,1782	0/0:39,0:39:99:0,114,3011	0/0:43,0:43:99:0,126,3400	0/0:38,0:38:99:0,114,3017	0/0:25,0:25:75.26:0,75,1929	0/0:31,0:31:84.25:0,84,2153	0/0:28,0:28:84.29:0,84,2250	0/0:21,0:21:63.16:0,63,1423	0/0:18,0:18:51.18:0,51,1377	0/0:74,0:73:99:0,208,5499	0/0:27,0:27:75.26:0,75,1986	0/0:15,0:15:45.14:0,45,1152	0/0:50,0:50:99:0,151,3958	0/0:19,0:19:54.19:0,54,1458	0/0:23,0:23:69.24:0,69,1834	0/0:27,0:27:81.28:0,81,2153	0/0:12,0:12:33.09:0,33,826
chr10	51482160	.	TACAC	T	1431.02	PASS	AB=0.917;AC=19;AF=0.365;AN=52;BaseQRankSum=5.343;DP=485;FS=8.995;HRun=0;HaplotypeScore=82.8688;InbreedingCoeff=0.8060;MQ=68.96;MQ0=6;MQRankSum=-1.555;QD=10.45;ReadPosRankSum=2.069;VQSLOD=1.8027;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:38:29.95:0,30,483	1/1:4,6:10:9.03:140,9,0	./.	./.	0/0:16,0:17:20.79:0,21,353	0/0:15,0:21:3.01:0,3,52	0/0:13,0:13:15.05:0,15,299	0/0:20,0:20:12.04:0,12,273	0/0:11,0:12:20.79:0,21,312	0/0:22,0:22:24.55:0,25,487	0/0:12,0:12:24.07:0,24,454	1/1:9,4:13:12.04:187,12,0	1/1:7,6:14:8.99:121,9,0	0/0:13,0:13:15.05:0,15,325	1/1:13,9:22:14.98:233,15,0	1/1:6,11:17:17.79:281,18,0	0/0:25,0:25:36.11:0,36,748	1/1:13,4:16:9.03:140,9,0	0/0:11,0:11:9.93:0,10,146	0/0:15,0:16:24.04:0,24,450	0/0:22,0:22:27.05:0,27,528	1/1:9,5:14:12.04:186,12,0	1/1:4,2:6:6.02:94,6,0	1/1:6,7:13:15.05:223,15,0	0/0:15,0:16:29.83:0,30,592	0/0:18,0:21:14.52:0,15,232	0/0:15,0:15:27.08:0,27,515	0/1:10,1:10:19.70:20,0,468
chr10	51482566	.	GAAAT	G	1827.51	PASS	AB=0.577;AC=19;AF=0.352;AN=54;BaseQRankSum=6.760;DP=302;FS=12.700;HRun=0;HaplotypeScore=53.0377;InbreedingCoeff=0.7147;MQ=60.65;MQ0=2;MQRankSum=1.828;QD=24.70;ReadPosRankSum=2.826;VQSLOD=2.1439;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,9:13:24.08:390,24,0	1/1:2,2:4:3.01:49,3,0	./.	0/0:2,0:1:2.96:0,3,19	0/0:16,0:16:27.08:0,27,544	0/0:16,0:16:33.77:0,34,455	0/0:11,0:11:15.04:0,15,218	0/0:38,0:38:63.22:0,63,1444	0/0:3,0:3:6.02:0,6,115	0/0:9,0:9:15.05:0,15,334	0/0:7,0:7:12.03:0,12,246	1/1:3,3:6:9.03:146,9,0	1/1:3,8:11:18.06:293,18,0	0/0:8,0:8:12.04:0,12,270	1/1:3,3:6:9.03:146,9,0	1/1:0,9:9:21.07:342,21,0	0/0:27,0:27:72.21:0,72,1554	0/1:4,11:15:19.84:452,0,20	0/0:8,0:8:18.06:0,18,412	0/0:9,0:9:12.04:0,12,291	0/0:5,0:5:6.02:0,6,146	1/1:1,1:2:3.01:49,3,0	1/1:1,4:5:5.14:96,5,0	1/1:2,1:3:3.01:49,3,0	0/0:15,0:15:27.09:0,27,595	0/0:16,0:16:39.13:0,39,865	0/0:14,0:14:19.96:0,20,485	0/0:14,0:14:33.10:0,33,639
chr10	51482594	.	T	TAA	538	PASS	AB=0.947;AC=5;AF=0.089;AN=56;BaseQRankSum=5.732;DP=336;FS=1.638;HRun=3;HaplotypeScore=54.5700;InbreedingCoeff=0.6033;MQ=64.11;MQ0=1;MQRankSum=-0.393;QD=10.76;ReadPosRankSum=-1.143;VQSLOD=0.0421;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:39.02:0,39,428	0/0:3,0:3:6.01:0,6,71	0/0:7,0:4:8.62:0,9,102	0/0:7,0:5:5.32:0,5,90	0/0:9,0:9:27.09:0,27,406	1/1:16,6:23:22.29:451,22,0	1/1:5,4:9:10.32:198,10,0	0/0:39,0:39:99:0,117,1717	0/0:7,0:7:15.05:0,15,228	0/0:10,0:10:24.08:0,24,366	0/0:9,0:9:27.08:0,27,392	0/0:7,0:7:21.03:0,21,256	0/0:11,0:11:26.98:0,27,246	0/0:8,0:8:24.07:0,24,342	0/0:9,0:9:24.03:0,24,279	0/0:11,0:10:23.99:0,24,221	0/0:29,0:29:87.16:0,87,1221	0/1:17,1:18:8.24:8,0,432	0/0:15,0:14:39.13:0,39,568	0/0:10,0:10:30.03:0,30,409	0/0:7,0:7:21.07:0,21,314	0/0:1,0:1:3:0,3,25	0/0:6,0:6:10.72:0,11,139	0/0:3,0:3:9.02:0,9,116	0/0:15,0:15:39.13:0,39,595	0/0:20,0:20:60.20:0,60,896	0/0:14,0:14:42.06:0,42,605	0/0:15,0:15:33.05:0,33,417
chr10	51482880	.	A	AT	4934.21	PASS	AB=0.529;AC=23;AF=0.411;AN=56;BaseQRankSum=-11.312;DP=632;FS=8.458;HRun=11;HaplotypeScore=64.0110;InbreedingCoeff=0.9259;MQ=67.34;MQ0=0;MQRankSum=-0.368;QD=17.62;ReadPosRankSum=1.566;VQSLOD=5.7899;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,28:36:22.50:577,22,0	0/1:1,7:9:2.36:146,0,2	0/0:16,0:15:10.43:0,10,168	0/0:9,0:9:11.42:0,11,90	0/0:20,0:20:44.78:0,45,348	1/1:5,17:22:21.85:403,22,0	1/1:4,19:23:45.09:457,45,0	0/0:35,0:36:91.65:0,92,700	0/0:34,0:34:80.61:0,81,624	0/0:26,0:26:53.74:0,54,418	0/0:11,0:12:19.90:0,20,145	1/1:6,20:28:50.77:485,51,0	1/1:2,29:31:66.12:664,66,0	0/0:23,0:24:55.79:0,56,424	1/1:4,18:22:39.08:396,39,0	1/1:8,22:30:13.64:502,14,0	0/0:21,0:21:59.75:0,60,464	1/1:5,17:22:39.08:396,39,0	0/0:24,1:27:13.34:0,13,277	0/0:23,0:24:22.01:0,22,306	0/0:14,0:14:23.84:0,24,184	1/1:4,4:8:9.90:93,10,0	1/1:3,12:15:24.36:244,24,0	1/1:8,23:34:24.94:571,25,0	0/0:12,0:12:20.89:0,21,163	0/0:26,0:25:59.72:0,60,463	0/0:33,0:33:80.65:0,81,627	0/0:17,0:18:40.50:0,41,296
chr10	51484704	.	T	TA	1651.61	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.580;DP=644;FS=7.548;HRun=2;HaplotypeScore=71.9823;InbreedingCoeff=0.9907;MQ=88.19;MQ0=0;MQRankSum=-4.587;QD=39.32;ReadPosRankSum=0.461;VQSLOD=3.9773;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:4,38:42:99:1746,111,0	0/0:6,0:6:18.06:0,18,252	0/0:26,0:26:48.30:0,48,845	0/0:26,0:26:71.28:0,71,884	0/0:27,0:27:75.25:0,75,1048	0/0:34,0:34:99:0,99,1346	0/0:23,0:23:69.21:0,69,947	0/0:30,0:30:90.30:0,90,1259	0/0:26,0:26:78.26:0,78,1089	0/0:26,0:26:78.26:0,78,1084	0/0:23,0:23:69.23:0,69,963	0/0:28,0:28:84.27:0,84,1157	0/0:20,0:20:60.20:0,60,837	0/0:30,0:30:84.28:0,84,1174	0/0:28,0:27:84.28:0,84,1174	0/0:15,0:15:45.15:0,45,624	0/0:20,0:20:60.17:0,60,819	0/0:13,0:13:33.11:0,33,458	0/0:22,0:22:60.18:0,60,821	0/0:22,0:22:63.20:0,63,862	0/0:26,0:26:75.25:0,75,1049	0/0:13,0:13:39.12:0,39,528	0/0:21,0:21:60.20:0,60,837	0/0:17,0:16:45.15:0,45,629	0/0:18,0:18:51.17:0,51,713	0/0:31,0:31:90.29:0,90,1244	0/0:22,0:22:63.19:0,63,860	0/0:9,0:9:27.07:0,27,359
chr10	51484874	.	CGT	C	536.80	PASS	AB=0.977;AC=6;AF=0.111;AN=54;BaseQRankSum=3.958;DP=668;FS=7.087;HRun=0;HaplotypeScore=98.9684;InbreedingCoeff=0.4058;MQ=57.59;MQ0=11;MQRankSum=1.212;QD=6.63;ReadPosRankSum=-0.232;VQSLOD=2.6337;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:58:55.03:0,55,451	0/0:8,0:8:6.21:0,6,38	0/0:34,0:13:5.67:0,6,35	0/0:33,0:18:8.99:0,9,75	0/0:20,3:23:12.17:0,12,565	1/1:4,14:18:27.08:323,27,0	1/1:12,16:30:26.91:297,27,0	0/0:31,0:31:34.07:0,34,494	0/0:27,0:27:54.04:0,54,625	0/0:25,0:25:53.97:0,54,644	0/0:15,1:16:3.13:0,3,453	0/0:16,0:16:8.98:0,9,75	0/0:11,0:11:2.24:0,2,19	0/0:32,4:36:30.36:0,30,761	./.	0/0:11,0:11:8.99:0,9,77	0/0:38,0:38:65.48:0,65,978	0/0:18,0:18:28.46:0,28,183	0/1:12,0:11:14.94:15,0,152	0/1:20,1:21:33.76:34,0,409	0/0:41,2:42:54.08:0,54,982	0/0:20,0:19:10.52:0,11,55	0/0:13,0:13:5.92:0,6,41	0/0:23,0:23:5.50:0,6,47	0/0:21,0:21:51.08:0,51,675	0/0:37,0:37:36.53:0,37,870	0/0:25,0:25:44.12:0,44,678	0/0:6,0:6:9.02:0,9,121
chr10	51484894	.	T	TGCGCGCGC	601.91	PASS	AC=12;AF=0.240;AN=50;BaseQRankSum=3.165;DP=588;FS=12.645;HRun=0;HaplotypeScore=156.6591;InbreedingCoeff=0.7973;MQ=53.36;MQ0=4;MQRankSum=-1.908;QD=6.76;ReadPosRankSum=-3.061;VQSLOD=1.3448;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:58:26.70:0,27,1038	1/1:8,1:10:2.56:25,3,0	./.	./.	0/0:23,0:23:48.16:0,48,1222	0/0:17,0:17:36.12:0,36,812	0/0:35,0:35:72.93:0,73,1575	0/0:21,0:21:18.06:0,18,433	0/0:20,0:20:33.11:0,33,863	0/0:22,0:22:36.12:0,36,806	0/0:16,0:16:37.01:0,37,930	0/0:14,0:15:2.84:0,3,9	1/1:10,0:10:1.78:9,2,0	0/0:26,0:26:42.14:0,42,1052	1/1:16,0:15:6.01:75,6,0	1/1:13,0:14:14.95:231,15,0	0/0:34,0:34:69.21:0,69,1734	1/1:12,3:18:17.93:345,18,0	0/0:14,0:13:24.06:0,24,530	0/0:18,0:19:33.11:0,33,815	0/0:42,0:42:69.22:0,69,1647	./.	0/0:13,0:13:0:0,0,0	1/1:20,1:21:5.98:67,6,0	0/0:20,0:20:36.09:0,36,874	0/0:28,0:29:60.21:0,60,1500	0/0:25,0:25:42.10:0,42,937	0/0:8,0:8:21.06:0,21,482
chr10	51485819	.	C	CTATTTATT	2018.64	PASS	AC=16;AF=0.308;AN=52;BaseQRankSum=-2.328;DP=340;FS=0.000;HRun=0;HaplotypeScore=87.3368;InbreedingCoeff=0.8126;MQ=61.38;MQ0=0;MQRankSum=-5.724;QD=30.59;ReadPosRankSum=-1.652;VQSLOD=2.6721;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:22.93:0,23,557	1/1:2,2:4:6.02:248,6,0	0/0:4,0:4:6.02:0,6,145	./.	0/0:22,0:22:48.16:0,48,1166	0/0:4,0:16:29.93:0,30,487	0/0:4,0:8:9.33:0,9,181	0/0:38,0:38:63.17:0,63,1414	0/0:6,0:6:6.02:0,6,153	0/0:23,0:23:33.11:0,33,841	0/0:25,0:25:63.22:0,63,1602	1/1:3,1:6:6.01:149,6,0	1/1:7,0:7:9.03:194,9,0	0/0:13,0:13:18.06:0,18,452	1/1:13,1:14:12.04:324,12,0	1/1:7,3:10:12.04:497,12,0	0/0:15,0:15:29.91:0,30,690	1/1:10,3:16:11.77:385,12,0	0/0:7,0:7:15.04:0,15,285	0/0:15,0:15:27.08:0,27,638	0/0:2,0:2:3.01:0,3,77	1/1:1,2:4:9.02:273,9,0	1/1:4,1:5:3.01:124,3,0	./.	0/0:10,0:10:18.06:0,18,455	0/0:12,0:12:18.06:0,18,455	0/0:17,0:17:36.11:0,36,846	0/0:18,0:19:54.11:0,54,1185
chr10	51485908	.	CATATATATACAT	C	4329.01	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=9.421;DP=334;FS=44.687;HRun=0;HaplotypeScore=103.8040;InbreedingCoeff=0.8848;MQ=64.67;MQ0=3;MQRankSum=-9.579;QD=49.76;ReadPosRankSum=4.468;VQSLOD=2.7002;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:27.04:0,27,930	1/1:0,8:8:24.08:873,24,0	1/1:6,0:4:0.17:6,0,0	0/0:20,0:7:8.37:0,8,114	0/0:22,0:22:57.18:0,57,2866	0/0:23,0:23:57.18:0,57,3100	0/0:6,0:6:18.03:0,18,683	0/0:37,0:37:87.21:0,87,3121	0/0:9,0:9:27.09:0,27,1497	0/0:13,0:13:30.10:0,30,1764	0/0:11,0:11:24.07:0,24,1053	1/1:0,8:8:15.05:546,15,0	1/1:1,16:17:21.07:764,21,0	0/0:10,0:10:27.08:0,27,1198	1/1:2,13:15:15.05:546,15,0	1/1:0,9:9:20.97:764,21,0	0/0:7,0:7:21.04:0,21,1109	1/1:6,1:7:8.95:150,9,0	0/0:10,0:10:24.06:0,24,1052	0/0:9,0:9:24.07:0,24,1141	0/0:6,0:6:18.06:0,18,1046	1/1:0,4:4:6.02:218,6,0	1/1:0,11:11:12.04:437,12,0	1/1:2,0:2:2.99:24,3,0	0/0:12,0:12:36.11:0,36,1821	0/0:17,0:17:51.16:0,51,2689	0/0:15,0:15:45.11:0,45,2185	0/0:8,0:8:15.02:0,15,592
chr10	51487036	.	C	CT	1012.92	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-5.175;DP=658;FS=0.000;HRun=9;HaplotypeScore=65.6980;InbreedingCoeff=0.9972;MQ=80.33;MQ0=0;MQRankSum=-1.213;QD=21.55;ReadPosRankSum=0.737;VQSLOD=4.3497;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:68.94:0,69,589	0/0:11,0:11:23.97:0,24,208	0/0:16,0:16:23.56:0,24,244	0/0:21,0:19:30.35:0,30,291	0/0:32,0:34:85.03:0,85,711	1/1:5,17:23:50.96:537,51,0	1/1:5,19:24:54.15:597,54,0	0/0:30,0:29:68.95:0,69,597	0/0:23,0:24:65.01:0,65,549	0/0:31,1:32:59.77:0,60,741	0/0:16,0:17:44.01:0,44,367	0/0:21,0:21:47.09:0,47,412	0/0:13,0:13:35.99:0,36,312	0/0:23,0:24:58.99:0,59,497	0/0:21,0:21:53.97:0,54,469	0/0:18,0:18:47.96:0,48,413	0/0:25,0:25:68.92:0,69,586	0/0:19,0:19:47.96:0,48,412	0/0:15,0:15:32.99:0,33,284	0/0:23,0:23:59.97:0,60,521	0/0:29,0:29:77.83:0,78,676	0/0:20,0:20:56.94:0,57,486	0/0:31,0:31:83.94:0,84,725	0/0:28,0:28:77.93:0,78,671	0/0:33,0:34:88.98:0,89,756	0/0:26,0:27:77.01:0,77,656	0/0:39,0:38:99:0,108,926	0/0:13,0:13:38.99:0,39,338
chr10	51488224	.	T	TTTGTTG	1428.04	PASS	AB=0.958;AC=12;AF=0.214;AN=56;BaseQRankSum=2.014;DP=789;FS=9.004;HRun=0;HaplotypeScore=193.8786;InbreedingCoeff=0.0931;MQ=66.42;MQ0=2;MQRankSum=-3.692;QD=5.31;ReadPosRankSum=-2.589;VQSLOD=1.1572;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:13,0:37:16.05:16,0,411	0/1:14,0:14:16.67:17,0,149	0/0:28,0:23:1.65:0,2,67	0/0:15,0:14:9.04:0,9,89	0/1:28,0:28:26.77:27,0,461	1/1:8,15:25:18.06:575,18,0	1/1:16,15:31:24.08:768,24,0	0/0:26,0:25:23.25:0,23,334	0/0:32,0:32:48.12:0,48,844	0/0:33,0:33:36.03:0,36,607	0/0:20,0:20:26.98:0,27,504	0/0:36,0:36:30.57:0,31,417	0/0:46,0:46:22.44:0,22,538	0/0:32,0:34:51.06:0,51,839	0/0:42,0:42:31.32:0,31,398	0/0:27,0:27:27.09:0,27,376	0/0:23,0:23:39.10:0,39,706	0/1:33,0:32:26.17:26,0,64	0/0:15,0:15:2.99:0,3,27	0/0:18,0:18:29.58:0,30,536	0/0:48,0:48:68.39:0,68,1111	0/1:25,0:25:9.48:9,0,74	0/1:22,0:22:14.61:15,0,33	0/1:30,0:29:25.13:25,0,70	0/1:12,0:24:34.34:108,0,34	0/0:37,0:39:41.58:0,42,658	0/0:31,0:30:48.12:0,48,918	0/0:6,0:7:2.31:0,2,289
chr10	51488249	.	TTGTTGTTGTTGC	T	7041.75	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=10.778;DP=738;FS=2.080;HRun=0;HaplotypeScore=212.0588;InbreedingCoeff=0.9590;MQ=55.68;MQ0=13;MQRankSum=-8.925;QD=29.10;ReadPosRankSum=4.529;VQSLOD=4.1515;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:33.09:0,33,1683	1/1:2,11:13:17.90:500,18,0	0/0:26,0:13:21.21:0,21,317	0/0:23,0:20:38.01:0,38,472	0/0:24,0:23:16.75:0,17,1990	0/0:28,0:28:39.02:0,39,1310	0/0:28,0:28:39.12:0,39,1767	0/0:36,0:35:54.37:0,54,1640	0/0:25,0:25:69.15:0,69,2965	0/0:31,0:30:69.62:0,70,2217	0/0:20,0:20:42.57:0,43,1862	1/1:8,23:31:32.63:1156,33,0	1/1:7,27:34:51.17:1769,51,0	0/0:33,0:33:81.16:0,81,2709	1/1:3,35:38:19.65:1181,20,0	1/1:3,26:29:6.13:1061,6,0	0/0:29,0:29:72.46:0,72,2471	1/1:8,23:30:12.87:275,13,0	0/0:8,0:6:8.99:0,9,103	0/0:17,0:17:38.97:0,39,1734	0/0:42,0:42:99:0,108,3789	1/1:7,14:21:17.97:400,18,0	1/1:2,16:17:16.85:393,17,0	1/1:5,22:27:15:307,15,0	0/0:18,0:18:38.98:0,39,1566	0/0:34,0:34:87.22:0,87,3065	0/0:27,0:26:72.16:0,72,3090	0/0:7,0:7:17.42:0,17,742
chr10	51488797	.	T	TAG	467.14	PASS	AB=0.962;AC=21;AF=0.457;AN=46;BaseQRankSum=-3.604;DP=465;FS=5.672;HRun=0;HaplotypeScore=90.3967;InbreedingCoeff=0.2259;MQ=75.74;MQ0=7;MQRankSum=-0.414;QD=1.82;ReadPosRankSum=-2.838;VQSLOD=0.8704;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:19,0:18:0.17:80,0,0	0/0:8,0:8:1.71:0,2,7	0/1:40,0:21:0:0,0,0	./.	./.	0/1:19,0:19:4.93:5,0,19	./.	1/1:24,0:23:1.25:4,1,0	0/0:8,0:12:5.68:0,6,28	0/1:18,0:18:0:0,0,0	1/1:15,0:15:2.99:23,3,0	0/0:11,0:15:8.48:0,8,41	0/1:11,0:13:14.73:15,0,19	1/1:17,0:17:6.35:49,6,0	0/0:9,0:17:14.06:0,14,69	0/0:2,0:9:8.52:0,9,42	0/1:15,6:25:20.04:107,0,20	0/0:10,0:16:7.81:0,8,41	1/1:9,0:8:3.01:40,3,0	0/0:16,0:16:3.01:0,3,31	1/1:7,0:7:6.01:68,6,0	./.	0/0:11,0:12:5.68:0,6,28	./.	1/1:8,2:10:3.01:44,3,0	0/1:17,0:17:21.16:56,0,21	1/1:14,6:24:3.47:106,3,0	0/0:14,0:14:1.62:0,2,9
chr10	51489041	.	G	GCCTGT	4953.39	PASS	AB=0.676;AC=46;AF=0.958;AN=48;BaseQRankSum=1.524;DP=147;FS=20.390;HRun=0;HaplotypeScore=159.3403;InbreedingCoeff=-0.1114;MQ=93.63;MQ0=0;MQRankSum=-2.757;QD=35.38;ReadPosRankSum=2.431;VQSLOD=3.3531;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,0:7:12.04:268,12,0	1/1:1,0:1:3.01:62,3,0	0/1:4,3:10:18.25:493,0,18	0/1:5,1:8:48.35:219,0,48	1/1:7,0:7:15.03:306,15,0	1/1:7,0:7:9.01:151,9,0	1/1:6,0:6:15:203,15,0	1/1:11,0:11:15.52:377,16,0	1/1:8,0:8:15.04:274,15,0	1/1:4,0:4:9.03:202,9,0	./.	./.	1/1:7,0:7:9.03:193,9,0	1/1:7,0:7:15.04:289,15,0	1/1:9,0:9:12.04:216,12,0	1/1:5,0:5:8.99:138,9,0	1/1:2,0:2:3.01:68,3,0	1/1:4,0:4:6.01:80,6,0	1/1:6,0:6:15.04:285,15,0	./.	./.	1/1:3,0:3:8.99:143,9,0	1/1:2,0:2:3.01:79,3,0	1/1:5,0:5:6.02:128,6,0	1/1:6,0:6:9:146,9,0	1/1:6,0:6:18.06:396,18,0	1/1:8,0:8:9.03:187,9,0	1/1:1,0:1:3.01:50,3,0
chr10	51490451	.	TTC	T	513.55	PASS	AB=0.946;AC=11;AF=0.196;AN=56;BaseQRankSum=-1.194;DP=482;FS=0.000;HRun=0;HaplotypeScore=101.7495;InbreedingCoeff=0.1364;MQ=54.44;MQ0=9;MQRankSum=0.262;QD=2.90;ReadPosRankSum=-0.202;VQSLOD=1.3602;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:21:88.95:89,0,132	0/0:13,0:12:6.31:0,6,34	0/0:20,0:9:0:0,0,0	0/0:30,0:17:6.01:0,6,70	0/0:23,0:22:11.93:0,12,92	0/0:27,0:26:17.98:0,18,150	0/0:12,0:11:9:0,9,77	0/0:22,0:20:17.68:0,18,130	0/0:9,0:9:18.80:0,19,148	0/1:17,0:15:17.92:18,0,204	0/0:13,0:13:11.46:0,11,107	0/0:10,0:9:5.88:0,6,51	0/1:13,0:12:5:5,0,39	0/0:21,0:21:1.57:0,2,236	0/0:20,0:20:14.94:0,15,118	0/0:14,0:14:9:0,9,78	0/1:25,0:24:18.39:18,0,257	0/0:8,0:8:10.89:0,11,66	0/1:6,9:15:5.50:96,0,6	1/1:24,1:25:28.76:210,29,0	0/1:26,0:23:62.41:105,0,62	0/0:14,0:13:11.88:0,12,89	0/0:13,0:13:5.94:0,6,43	0/0:17,0:17:14.89:0,15,122	0/1:16,0:15:35.37:57,0,35	0/0:11,0:11:8.98:0,9,75	1/1:17,0:17:8.68:64,9,0	0/0:8,0:8:8.69:0,9,69
chr10	51490474	.	TCTCA	T	583.26	PASS	AB=0.971;AC=17;AF=0.315;AN=54;BaseQRankSum=-0.207;DP=409;FS=2.823;HRun=0;HaplotypeScore=101.3381;InbreedingCoeff=-0.2510;MQ=44.81;MQ0=15;MQRankSum=-0.217;QD=2.24;ReadPosRankSum=-0.329;VQSLOD=1.9262;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:25:87.84:88,0,158	0/0:9,0:8:5.77:0,6,33	./.	0/0:9,0:2:6.01:0,6,70	0/0:22,0:21:11.93:0,12,92	0/1:23,0:22:8.65:9,0,124	0/0:11,0:10:9.47:0,9,78	0/0:12,0:9:17.68:0,18,130	0/0:11,0:11:22.17:0,22,188	0/1:15,0:13:15:15,0,251	0/1:16,0:16:4.15:4,0,151	0/1:10,0:9:7.82:8,0,42	0/1:11,0:10:5.21:5,0,39	0/1:22,0:22:7.54:8,0,361	0/0:17,0:17:15.29:0,15,118	0/1:8,0:8:2.47:2,0,66	0/1:26,0:24:38.80:39,0,441	0/1:6,0:6:9.70:10,0,46	0/1:15,0:14:8.35:91,0,8	1/1:20,0:19:13.03:202,13,0	0/1:22,0:19:99:137,0,107	0/0:12,0:11:11.88:0,12,89	0/0:14,0:14:5.94:0,6,43	0/0:19,0:19:14.87:0,15,122	0/1:16,0:14:41.81:42,0,142	0/0:9,0:8:13.60:0,14,110	0/1:3,10:13:13.07:51,0,13	0/1:10,0:10:23.41:23,0,88
chr10	51490476	.	TCACACACA	T	321.79	PASS	AB=0.636;AC=11;AF=0.229;AN=48;BaseQRankSum=3.587;DP=409;FS=9.342;HRun=0;HaplotypeScore=123.1175;InbreedingCoeff=0.5975;MQ=44.98;MQ0=14;MQRankSum=-2.749;QD=4.66;ReadPosRankSum=-2.230;VQSLOD=1.3194;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:24:9.33:0,9,243	1/1:7,0:8:0.47:1,0,0	./.	./.	0/0:16,0:21:2.99:0,3,24	1/1:16,1:20:9.03:185,9,0	0/0:9,0:9:0.47:0,0,1	./.	0/0:12,0:12:12.02:0,12,231	0/0:15,0:13:17.93:0,18,296	0/0:18,0:18:12.51:0,13,347	1/1:6,4:9:1.95:67,2,0	0/0:6,6:11:8.22:0,8,42	0/0:21,0:21:33.09:0,33,917	0/0:10,0:18:0.89:0,1,2	1/1:7,0:9:3.01:63,3,0	0/0:26,0:24:42.12:0,42,1075	1/1:6,0:6:6.02:124,6,0	0/0:17,0:16:25.30:0,25,311	0/0:21,0:20:9.07:0,9,112	0/0:22,0:19:18.04:0,18,417	./.	0/1:6,8:14:0:0,0,0	0/0:12,6:18:2.98:0,3,22	0/0:16,0:14:17.92:0,18,502	0/0:12,0:11:24.05:0,24,438	0/0:16,0:16:15.05:0,15,370	0/0:10,0:10:15.05:0,15,410
chr10	51490784	.	T	TG	8665.73	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=9.286;DP=676;FS=11.033;HRun=0;HaplotypeScore=73.9365;InbreedingCoeff=0.9908;MQ=82.44;MQ0=0;MQRankSum=-0.287;QD=43.11;ReadPosRankSum=4.024;VQSLOD=4.8339;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:90.29:0,90,1239	1/1:1,12:13:36.12:574,36,0	0/0:20,0:20:53.75:0,54,673	0/0:19,0:19:53.65:0,54,649	0/0:27,0:27:72.23:0,72,988	0/0:35,0:35:99:0,99,1366	0/0:24,0:24:69.19:0,69,912	0/0:38,0:38:99:0,111,1536	0/0:21,0:21:60.19:0,60,821	0/0:36,0:36:99:0,99,1384	0/0:23,0:23:69.23:0,69,964	1/1:0,31:31:84.29:1341,84,0	1/1:0,24:24:63.21:1004,63,0	0/0:22,0:22:63.21:0,63,881	1/1:1,23:23:63.21:1006,63,0	1/1:0,35:35:99:1678,105,0	0/0:23,0:23:69.21:0,69,945	1/1:0,3:3:9.03:143,9,0	0/0:19,0:19:57.19:0,57,794	0/0:27,0:27:75.17:0,75,1006	0/0:33,0:33:99:0,99,1328	1/1:0,26:26:66.23:1054,66,0	1/1:0,18:18:45.15:715,45,0	1/1:0,27:27:72.25:1150,72,0	0/0:17,0:17:51.14:0,51,679	0/0:29,0:29:84.26:0,84,1136	0/0:19,0:19:54.17:0,54,740	0/0:13,0:13:36.12:0,36,503
chr10	51491213	.	A	ATG	3588.40	PASS	AB=1.000;AC=25;AF=0.446;AN=56;BaseQRankSum=8.705;DP=677;FS=1.757;HRun=0;HaplotypeScore=117.4403;InbreedingCoeff=0.9333;MQ=59.16;MQ0=4;MQRankSum=-10.222;QD=13.00;ReadPosRankSum=0.231;VQSLOD=3.4172;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:13,17:30:35.20:499,35,0	1/1:11,0:11:20.02:168,20,0	0/0:27,0:21:10.04:0,10,147	0/1:19,0:10:0.05:0,0,68	0/0:33,0:33:78.19:0,78,873	1/1:10,21:32:42.13:655,42,0	1/1:7,8:15:21.07:327,21,0	0/0:37,0:37:51.11:0,51,558	0/0:24,0:24:57.14:0,57,640	0/0:26,0:24:54.06:0,54,593	0/0:23,0:23:54.16:0,54,626	1/1:24,0:24:46.95:374,47,0	1/1:15,0:15:20.98:175,21,0	0/0:33,0:34:78.06:0,78,884	1/1:26,0:26:50.94:425,51,0	1/1:27,0:27:31.04:235,31,0	0/0:17,0:17:24.05:0,24,265	1/1:17,0:17:10.27:120,10,0	0/0:23,0:23:21:0,21,234	0/0:23,0:23:60.12:0,60,650	0/0:16,0:17:23.88:0,24,245	1/1:25,0:25:41.09:296,41,0	1/1:20,0:20:29.97:260,30,0	1/1:15,0:15:8.02:54,8,0	0/0:23,1:24:13.38:0,13,593	0/0:39,0:38:81.69:0,82,923	0/0:40,0:40:93.14:0,93,995	0/0:11,0:11:18.05:0,18,209
chr10	51491234	.	T	TGTGTGC	8736.99	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-4.584;DP=653;FS=2.483;HRun=0;HaplotypeScore=145.6149;InbreedingCoeff=0.9523;MQ=60.01;MQ0=6;MQRankSum=-12.922;QD=46.72;ReadPosRankSum=2.776;VQSLOD=5.1065;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:32.40:0,32,145	1/1:3,6:11:16.91:561,17,0	0/0:31,0:22:56.52:0,57,750	0/0:19,0:11:30.01:0,30,367	0/0:31,0:31:87.25:0,87,1861	0/0:32,0:32:54.78:0,55,284	0/0:16,0:16:30.16:0,30,169	0/0:29,0:29:75.18:0,75,1302	0/0:23,0:23:69.18:0,69,1421	0/0:27,0:24:72.19:0,72,1404	0/0:22,0:22:66.17:0,66,1353	1/1:6,15:25:48.16:1474,48,0	1/1:1,10:14:24.08:783,24,0	0/0:32,0:32:90.24:0,90,1887	1/1:6,17:29:60.21:2006,60,0	1/1:8,13:25:39.13:1214,39,0	0/0:14,0:14:35.43:0,35,633	1/1:8,8:16:1.47:431,1,0	0/0:16,0:16:33.06:0,33,537	0/0:30,0:30:87.05:0,87,1577	0/0:13,0:13:32.77:0,33,568	1/1:5,20:28:33.11:1127,33,0	1/1:5,11:22:32.47:885,32,0	1/1:5,11:17:8.66:256,9,0	0/0:27,0:27:74.77:0,75,1436	0/0:36,0:35:99:0,99,2020	0/0:33,0:33:99:0,99,2040	0/0:7,0:7:21.05:0,21,442
chr10	51491432	.	C	CG	8255.59	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=18.227;DP=690;FS=1.378;HRun=1;HaplotypeScore=80.2635;InbreedingCoeff=0.9909;MQ=86.95;MQ0=0;MQRankSum=-2.322;QD=38.58;ReadPosRankSum=1.817;VQSLOD=5.5351;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,135,1744	1/1:2,13:15:39.13:563,39,0	0/0:24,0:25:66.15:0,66,799	0/0:22,0:22:57.18:0,57,718	0/0:24,0:24:69.22:0,69,894	0/0:26,0:26:78.25:0,78,1012	0/0:27,0:27:75.23:0,75,959	0/0:35,0:35:99:0,99,1273	0/0:28,0:28:78.25:0,78,1010	0/0:27,0:27:69.22:0,69,895	0/0:27,0:27:75.24:0,75,974	1/1:1,29:30:78.26:1120,78,0	1/1:2,26:28:81.23:1138,81,0	0/0:26,0:26:78.23:0,78,994	1/1:0,25:25:72.24:1034,72,0	1/1:0,26:26:75.21:1059,75,0	0/0:23,0:23:60.19:0,60,779	1/1:0,19:19:57.16:798,57,0	0/0:19,0:19:57.18:0,57,738	0/0:26,0:26:75.23:0,75,959	0/0:19,0:19:54.18:0,54,701	1/1:1,16:17:45.15:638,45,0	1/1:3,15:18:36.12:515,36,0	1/1:0,36:36:96.32:1391,96,0	0/0:15,0:15:45.15:0,45,584	0/0:33,0:33:99:0,99,1273	0/0:26,0:26:75.24:0,75,973	0/0:3,0:3:9.03:0,9,117
chr10	51493960	.	T	TA	3945.47	PASS	AB=0.571;AC=17;AF=0.304;AN=56;BaseQRankSum=14.148;DP=524;FS=0.385;HRun=8;HaplotypeScore=75.7261;InbreedingCoeff=0.9251;MQ=90.27;MQ0=0;MQRankSum=-8.169;QD=27.98;ReadPosRankSum=-1.297;VQSLOD=3.4818;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:50.98:0,51,458	1/1:1,5:6:17.99:191,18,0	0/0:34,0:33:65.97:0,66,591	0/0:15,0:15:8.86:0,9,186	0/0:28,0:28:81.04:0,81,741	0/0:20,0:20:51.03:0,51,467	0/0:21,0:21:54.01:0,54,491	0/0:26,0:26:69.04:0,69,631	0/0:10,0:10:27.01:0,27,247	0/0:23,0:23:63.03:0,63,576	0/0:20,0:20:51.03:0,51,467	1/1:2,10:12:36.08:396,36,0	1/1:4,10:14:30.09:344,30,0	0/0:18,0:18:39.02:0,39,357	1/1:5,17:22:57.10:629,57,0	1/1:7,18:25:69.03:766,69,0	0/0:24,0:24:57.02:0,57,522	0/1:5,15:20:3.77:463,0,4	0/0:18,0:18:45:0,45,410	0/0:28,0:28:77.81:0,78,691	0/0:14,0:14:39.01:0,39,353	1/1:4,12:16:38.95:404,39,0	1/1:4,11:15:36.10:407,36,0	1/1:0,11:11:30.09:346,30,0	0/0:14,0:14:36.01:0,36,329	0/0:30,0:30:83.94:0,84,757	0/0:18,0:18:48.02:0,48,439	0/0:4,0:4:12.01:0,12,110
chr10	51493972	.	C	CA	4542.02	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=13.610;DP=503;FS=6.385;HRun=4;HaplotypeScore=70.1479;InbreedingCoeff=0.9932;MQ=86.40;MQ0=0;MQRankSum=-7.534;QD=33.40;ReadPosRankSum=-0.488;VQSLOD=5.1698;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:48.14:0,48,544	1/1:1,7:8:21.07:286,21,0	0/0:27,0:26:28.76:0,29,442	0/0:15,0:15:20.44:0,20,245	0/0:30,0:30:81.23:0,81,919	0/0:19,0:19:51.13:0,51,569	0/0:22,0:22:60.13:0,60,659	0/0:27,0:27:60.17:0,60,681	0/0:11,0:11:33.08:0,33,365	0/0:24,0:24:68.92:0,69,750	0/0:18,0:18:51.14:0,51,574	1/1:2,10:12:27.09:369,27,0	1/1:3,10:13:30.10:409,30,0	0/0:16,0:16:45.13:0,45,510	1/1:0,19:19:57.19:778,57,0	1/1:2,17:19:51.17:696,51,0	0/0:19,0:19:57.16:0,57,646	1/1:5,18:23:57.18:759,57,0	0/0:18,0:18:48.14:0,48,544	0/0:28,0:28:84.24:0,84,952	0/0:14,0:14:33.09:0,33,371	1/1:2,12:14:33.07:429,33,0	1/1:3,12:15:33.01:406,33,0	1/1:2,11:13:30.10:410,30,0	0/0:13,0:13:36.08:0,36,397	0/0:27,0:27:72.17:0,72,797	0/0:17,0:17:45.13:0,45,510	0/0:4,0:4:12.03:0,12,136
chr10	51494526	.	A	ACTCCCTG	6472.92	PASS	AC=18;AF=0.333;AN=54;BaseQRankSum=10.172;DP=234;FS=15.531;HRun=0;HaplotypeScore=95.5264;InbreedingCoeff=0.8435;MQ=89.57;MQ0=0;MQRankSum=-10.316;QD=88.67;ReadPosRankSum=3.258;VQSLOD=5.1331;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:28.91:0,29,701	1/1:1,3:4:9.03:348,9,0	0/0:17,0:11:21.06:0,21,517	0/0:18,0:14:29.93:0,30,646	0/0:5,0:5:15.05:0,15,342	0/0:7,0:7:21.07:0,21,513	0/0:16,0:16:39.13:0,39,1008	0/0:16,0:16:39.13:0,39,987	0/0:4,0:4:12.04:0,12,312	0/0:6,0:6:9.03:0,9,234	./.	1/1:6,3:9:27.09:833,27,0	1/1:4,5:9:21.07:751,21,0	0/0:3,0:3:6.02:0,6,123	1/1:7,7:14:39.05:1301,39,0	1/1:5,6:11:33.07:1139,33,0	0/0:11,0:11:33.11:0,33,857	1/1:0,6:6:18.06:716,18,0	0/0:15,0:15:33.10:0,33,787	0/0:2,0:2:6.02:0,6,156	0/0:15,0:15:27.52:0,28,591	1/1:4,1:5:2.94:118,3,0	1/1:3,1:4:9:356,9,0	1/1:5,6:11:23.82:910,24,0	0/0:3,0:3:9.03:0,9,234	0/0:3,0:3:6.02:0,6,155	0/0:5,0:5:12.04:0,12,300	0/0:1,0:1:3.01:0,3,78
chr10	51494533	.	A	AT	2575.84	PASS	AC=18;AF=0.333;AN=54;BaseQRankSum=11.829;DP=270;FS=11.127;HRun=0;HaplotypeScore=70.0410;InbreedingCoeff=0.9013;MQ=95.09;MQ0=0;MQRankSum=-11.564;QD=32.20;ReadPosRankSum=4.529;VQSLOD=2.5164;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:40.01:0,40,531	1/1:0,4:4:6.02:95,6,0	0/0:19,0:13:33.08:0,33,439	0/0:22,0:19:54.05:0,54,650	0/0:6,0:6:18.06:0,18,252	0/0:8,0:8:21.07:0,21,293	0/0:15,0:15:42.14:0,42,587	0/0:23,0:23:63.18:0,63,823	0/0:6,0:6:18.05:0,18,234	0/0:6,0:6:18.02:0,18,230	./.	1/1:1,12:13:35.96:462,36,0	1/1:0,11:11:33.11:471,33,0	0/0:4,0:4:12.04:0,12,167	1/1:3,12:15:41.92:560,42,0	1/1:0,10:10:30.03:423,30,0	0/0:12,0:12:36.10:0,36,485	1/1:0,6:6:18.06:285,18,0	0/0:16,0:16:42.13:0,42,567	0/0:6,0:6:15.04:0,15,193	0/0:16,0:16:45.10:0,45,588	1/1:2,4:6:8.94:101,9,0	1/1:0,3:3:6.02:84,6,0	1/1:1,11:12:20.95:297,21,0	0/0:3,0:3:9.03:0,9,126	0/0:5,0:5:15.04:0,15,180	0/0:5,0:5:15.05:0,15,210	0/0:1,0:1:3.01:0,3,42
chr10	51494543	.	C	CT	2850.53	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=12.419;DP=299;FS=30.978;HRun=1;HaplotypeScore=73.1155;InbreedingCoeff=0.9049;MQ=94.56;MQ0=0;MQRankSum=-12.178;QD=30.01;ReadPosRankSum=3.013;VQSLOD=1.8863;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:51.14:0,51,645	1/1:1,3:4:9.03:119,9,0	0/0:16,0:14:39.10:0,39,481	0/0:19,0:19:51.17:0,51,662	0/0:7,0:7:21.06:0,21,259	0/0:10,0:10:30.10:0,30,389	0/0:12,0:12:36.09:0,36,450	0/0:25,0:25:69.21:0,69,872	0/0:8,0:8:24.06:0,24,296	0/0:8,0:8:21.07:0,21,269	0/0:1,0:1:3.01:0,3,39	1/1:0,13:13:33.04:466,33,0	1/1:0,12:12:36.09:514,36,0	0/0:8,0:8:18.06:0,18,234	1/1:2,20:22:48.03:622,48,0	1/1:0,11:11:33.11:493,33,0	0/0:13,0:13:36.12:0,36,467	1/1:1,7:8:15.05:224,15,0	0/0:17,0:17:45.14:0,45,567	0/0:6,0:6:18.06:0,18,234	0/0:17,0:17:48.16:0,48,623	1/1:0,7:7:14.96:174,15,0	1/1:0,4:4:6.02:90,6,0	1/1:1,13:14:26.97:352,27,0	0/0:4,0:4:12.04:0,12,156	0/0:8,0:8:21.06:0,21,260	0/0:6,0:6:18.06:0,18,234	0/0:1,0:1:3.01:0,3,39
chr10	51494566	.	TA	T	3944.17	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=13.602;DP=386;FS=8.016;HRun=1;HaplotypeScore=76.5153;InbreedingCoeff=0.9749;MQ=96.92;MQ0=0;MQRankSum=-11.646;QD=32.33;ReadPosRankSum=3.023;VQSLOD=2.8692;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:75.24:0,75,1175	1/1:0,4:4:9.03:117,9,0	0/0:19,0:19:55.74:0,56,850	0/0:22,0:22:66.18:0,66,1004	0/0:8,0:8:21.05:0,21,312	0/0:14,0:14:42.14:0,42,668	0/0:17,0:17:51.14:0,51,767	0/0:26,0:26:78.24:0,78,1180	0/0:9,0:9:27.09:0,27,432	0/0:9,0:9:24.08:0,24,383	0/0:6,0:6:18.05:0,18,264	1/1:0,14:14:42.14:547,42,0	1/1:0,17:17:45.15:583,45,0	0/0:14,0:14:42.14:0,42,671	1/1:0,27:27:72.23:933,72,0	1/1:0,14:14:30.10:389,30,0	0/0:16,0:16:48.14:0,48,742	1/1:0,11:11:27.09:350,27,0	0/0:17,0:17:48.16:0,48,759	0/0:8,0:8:24.08:0,24,382	0/0:18,0:18:54.18:0,54,862	1/1:0,11:11:30.10:389,30,0	1/1:0,5:5:15.05:192,15,0	1/1:0,19:19:36.05:445,36,0	0/0:6,0:6:18.06:0,18,288	0/0:10,0:10:30.10:0,30,480	0/0:16,0:16:42.14:0,42,671	0/0:3,0:3:9.01:0,9,116
chr10	51494934	.	A	AC	10455.86	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-12.083;DP=682;FS=2.544;HRun=1;HaplotypeScore=68.1338;InbreedingCoeff=0.9997;MQ=82.22;MQ0=0;MQRankSum=-1.623;QD=40.37;ReadPosRankSum=5.549;VQSLOD=5.1948;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:81.26:0,81,1051	1/1:1,9:10:27.05:380,27,0	0/0:17,0:17:50.53:0,51,622	0/0:19,0:19:51.05:0,51,603	0/0:17,0:17:51.17:0,51,662	1/1:0,26:26:75.25:1124,75,0	1/1:1,29:30:78.26:1169,78,0	0/0:37,0:37:99:0,102,1325	0/0:28,0:28:81.26:0,81,1052	0/0:32,0:32:93.30:0,93,1208	0/0:16,0:16:39.13:0,39,506	1/1:0,22:22:60.20:899,60,0	1/1:1,29:30:75.25:1124,75,0	0/0:29,0:29:81.25:0,81,1038	1/1:0,38:38:99:1709,114,0	1/1:1,26:27:32.97:995,33,0	0/0:16,0:16:48.16:0,48,623	1/1:0,11:12:30.10:449,30,0	0/0:21,0:21:60.19:0,60,779	0/0:22,0:22:66.21:0,66,856	0/0:28,0:28:81.26:0,81,1052	1/1:0,24:24:60.20:899,60,0	1/1:0,17:17:51.17:764,51,0	1/1:0,23:23:63.21:944,63,0	0/0:24,0:24:72.20:0,72,904	0/0:30,0:30:90.28:0,90,1144	0/0:38,0:38:99:0,114,1462	0/0:19,0:19:54.65:0,55,702
chr10	51495366	.	G	GAAAAAAA	1781.98	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=5.220;DP=591;FS=6.751;HRun=0;HaplotypeScore=158.1195;InbreedingCoeff=0.8674;MQ=71.90;MQ0=0;MQRankSum=-3.320;QD=12.91;ReadPosRankSum=-1.654;VQSLOD=2.1963;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:60.09:0,60,1073	1/1:8,0:8:12.06:188,12,0	0/0:18,0:18:35.69:0,36,541	0/0:17,0:14:24.01:0,24,286	0/0:32,0:32:74.03:0,74,1484	0/0:19,0:19:1.92:0,2,270	0/0:24,0:24:51.79:0,52,520	0/0:35,0:35:87.16:0,87,1674	0/0:26,0:26:78.23:0,78,1780	0/0:26,0:26:71.70:0,72,1481	0/0:17,0:17:39:0,39,769	1/1:14,0:13:10.50:164,10,0	1/1:5,0:17:5.57:79,6,0	0/0:26,0:26:66.15:0,66,1443	1/1:13,0:25:11.20:273,11,0	1/1:11,0:13:10.27:296,10,0	0/0:19,0:18:50.43:0,50,1090	1/1:3,0:9:1.96:72,2,0	0/0:17,0:17:41.85:0,42,568	0/0:33,0:33:80.40:0,80,1658	0/0:18,0:18:44.85:0,45,960	1/1:4,6:14:22.29:501,22,0	1/1:5,12:24:15.54:357,16,0	1/1:5,1:12:4.80:45,5,0	0/0:23,0:23:56.92:0,57,1347	0/0:25,0:25:68.40:0,68,1349	0/0:33,0:33:84.24:0,84,1831	0/0:14,0:14:42.12:0,42,814
chr10	51496215	.	CT	C	2021.90	PASS	AB=0.922;AC=20;AF=0.357;AN=56;BaseQRankSum=8.794;DP=607;FS=6.916;HRun=13;HaplotypeScore=68.2820;InbreedingCoeff=0.7892;MQ=74.90;MQ0=0;MQRankSum=0.431;QD=10.70;ReadPosRankSum=3.840;VQSLOD=3.2137;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,1:19:26.12:0,26,391	1/1:2,5:7:16.94:115,17,0	0/0:17,2:16:0.55:0,1,139	0/1:16,2:14:13.17:56,0,13	0/0:30,4:34:9.30:0,9,545	0/0:30,0:32:83.96:0,84,798	0/1:15,1:17:5.25:5,0,219	0/0:28,1:29:47.81:0,48,430	0/0:17,1:19:28.84:0,29,415	0/0:28,1:29:26.15:0,26,407	0/0:27,0:27:60.05:0,60,561	1/1:5,14:19:35.75:263,36,0	1/1:5,7:12:23.78:174,24,0	0/0:25,2:27:22.30:0,22,540	1/1:4,15:19:12.57:255,13,0	1/1:5,18:24:49.74:356,50,0	0/0:18,2:20:4.23:0,4,348	1/1:2,7:10:17.89:131,18,0	0/0:23,0:23:19.91:0,20,330	0/0:23,0:23:33.86:0,34,456	0/0:12,0:12:18.01:0,18,166	1/1:5,19:24:21.54:321,22,0	1/1:6,11:18:37.95:268,38,0	1/1:4,17:21:38.73:284,39,0	0/0:22,0:23:65.93:0,66,623	0/0:35,1:36:41.16:0,41,550	0/0:32,3:34:14.62:0,15,608	0/0:9,0:9:23.97:0,24,217
chr10	51496334	.	A	AT	3175.55	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-7.534;DP=521;FS=14.886;HRun=8;HaplotypeScore=54.7361;InbreedingCoeff=0.9770;MQ=72.07;MQ0=0;MQRankSum=-1.291;QD=27.86;ReadPosRankSum=2.041;VQSLOD=2.9170;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:39:0,39,357	1/1:3,9:12:30.02:329,30,0	0/0:14,0:13:7.50:0,8,170	0/0:11,0:9:9:0,9,82	0/0:31,0:31:90.03:0,90,820	0/0:28,0:27:78.02:0,78,709	0/0:14,0:14:35.98:0,36,317	0/0:21,0:20:48:0,48,431	0/0:20,0:20:45.49:0,45,412	0/0:25,0:25:69.03:0,69,631	0/0:27,0:27:69.03:0,69,629	1/1:1,6:7:21:225,21,0	1/1:3,12:15:39.12:449,39,0	0/0:17,0:17:48.01:0,48,435	1/1:1,7:8:24.07:277,24,0	1/1:4,11:15:36.11:415,36,0	0/0:18,0:18:48.01:0,48,435	1/1:1,10:12:27.55:312,28,0	0/0:22,0:22:54.01:0,54,494	0/0:37,0:37:99:0,108,988	0/0:11,0:11:30.02:0,30,275	1/1:0,13:13:39.03:432,39,0	1/1:0,22:22:60.09:675,60,0	1/1:1,9:10:23.74:275,24,0	0/0:20,0:20:54.03:0,54,494	0/0:32,0:32:87.02:0,87,788	0/0:22,0:22:66.03:0,66,601	0/0:17,0:17:45.02:0,45,412
chr10	51496389	.	G	GAAACA	7123.07	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-6.568;DP=572;FS=0.427;HRun=0;HaplotypeScore=101.9226;InbreedingCoeff=0.9885;MQ=67.11;MQ0=1;MQRankSum=-2.042;QD=52.38;ReadPosRankSum=1.417;VQSLOD=4.9964;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:52.73:0,53,952	1/1:3,10:13:30.09:804,30,0	0/0:24,0:21:30.05:0,30,418	0/0:28,0:20:25.06:0,25,398	0/0:33,0:33:96.26:0,96,1701	0/0:30,0:30:78.27:0,78,1432	0/0:25,0:25:69.15:0,69,1112	0/0:35,0:35:60.19:0,60,1036	0/0:24,0:24:66.18:0,66,1200	0/0:26,0:26:54.15:0,54,951	0/0:23,0:23:54.19:0,54,1008	1/1:0,11:11:24.08:693,24,0	1/1:10,7:17:39.13:948,39,0	0/0:13,0:13:27.06:0,27,449	1/1:3,9:13:21.07:607,21,0	1/1:2,10:12:27.09:766,27,0	0/0:21,0:21:42.12:0,42,765	1/1:9,3:12:24.02:509,24,0	0/0:25,0:22:36.09:0,36,601	0/0:24,0:24:66.17:0,66,1140	0/0:14,0:14:39.13:0,39,710	1/1:12,9:21:42.05:933,42,0	1/1:8,11:19:45.12:1127,45,0	1/1:11,7:18:30.04:737,30,0	0/0:10,0:10:24.03:0,24,384	0/0:26,0:26:57.19:0,57,1055	0/0:28,0:28:81.21:0,81,1483	0/0:9,0:9:9.03:0,9,144
chr10	51496731	.	T	TAAA	4169.17	PASS	AB=0.950;AC=25;AF=0.446;AN=56;BaseQRankSum=4.069;DP=585;FS=0.441;HRun=12;HaplotypeScore=99.2339;InbreedingCoeff=0.9119;MQ=69.98;MQ0=1;MQRankSum=0.467;QD=17.09;ReadPosRankSum=-1.067;VQSLOD=2.2040;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,0:21:18.69:42,19,0	1/1:3,11:14:27.09:474,27,0	0/1:17,0:13:5.80:6,0,104	0/0:13,0:12:4.79:0,5,49	0/0:33,0:35:71.35:0,71,721	1/1:9,0:26:19.80:62,20,0	1/1:2,0:15:16.51:37,17,0	0/0:39,0:41:45.04:0,45,522	0/0:16,0:16:39.07:0,39,437	0/0:27,0:29:55.35:0,55,601	0/0:23,0:27:51.19:0,51,594	1/1:6,6:13:21.05:335,21,0	1/1:5,14:22:32.98:534,33,0	0/0:20,0:21:47.94:0,48,517	1/1:3,7:14:18:251,18,0	1/1:5,15:23:42.10:668,42,0	0/0:20,0:19:50.95:0,51,520	1/1:4,14:24:41.98:574,42,0	0/0:19,0:19:51.10:0,51,554	0/0:22,0:22:47.93:0,48,538	0/0:19,0:19:48.03:0,48,528	1/1:5,13:20:42:581,42,0	1/1:6,2:19:19.12:271,19,0	1/1:5,8:14:21.05:336,21,0	0/0:18,0:19:44.89:0,45,488	0/0:21,0:23:49.40:0,49,547	0/0:28,0:27:65.93:0,66,706	0/0:9,0:9:10.21:0,10,131
chr10	51496939	.	AAGAGAG	A	2048.88	PASS	AB=0.788;AC=18;AF=0.346;AN=52;BaseQRankSum=3.001;DP=526;FS=5.814;HRun=0;HaplotypeScore=127.7079;InbreedingCoeff=0.6313;MQ=61.21;MQ0=8;MQRankSum=-6.026;QD=10.14;ReadPosRankSum=3.775;VQSLOD=1.5875;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:34:57.17:0,57,1655	./.	./.	0/1:35,0:17:0.20:0,0,0	0/0:16,0:18:29.25:0,29,762	1/1:7,3:10:12.46:282,12,0	1/1:1,2:3:5.99:82,6,0	0/0:26,0:26:18.03:0,18,334	0/0:12,0:22:15.05:0,15,355	0/0:17,0:17:32.30:0,32,825	0/0:15,0:15:17.10:0,17,479	1/1:10,11:22:24.55:454,25,0	1/1:8,7:16:12.04:224,12,0	0/0:19,0:20:26.94:0,27,568	0/1:12,3:28:33.51:177,0,34	1/1:12,8:21:18.06:348,18,0	0/0:8,0:12:9.03:0,9,196	0/1:15,6:21:19.41:55,0,19	0/0:18,0:18:22.13:0,22,402	0/0:23,0:23:27.02:0,27,490	0/0:12,0:12:8.97:0,9,135	1/1:8,9:19:18.06:329,18,0	1/1:7,5:12:3.01:61,3,0	0/1:9,5:14:13.62:217,0,14	0/0:17,0:18:29.92:0,30,749	0/0:21,0:25:63.15:0,63,1289	0/0:22,0:21:18.04:0,18,407	0/0:14,0:12:21.07:0,21,574
chr10	51497361	.	GA	G	2908.31	PASS	AB=0.707;AC=17;AF=0.304;AN=56;BaseQRankSum=6.113;DP=608;FS=4.499;HRun=11;HaplotypeScore=72.4266;InbreedingCoeff=0.7638;MQ=71.45;MQ0=0;MQRankSum=2.856;QD=15.55;ReadPosRankSum=4.451;VQSLOD=4.4852;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:35:47.66:0,48,263	1/1:2,12:14:32.95:271,33,0	0/1:9,0:9:3.06:3,0,71	0/0:6,2:8:2.80:0,3,13	0/0:23,2:26:38.50:0,38,607	0/0:6,0:25:45.68:0,46,239	0/0:6,0:23:48.94:0,49,283	0/0:26,0:27:68.99:0,69,706	0/0:25,0:25:66.17:0,66,704	0/0:21,0:21:45.09:0,45,464	0/0:20,0:20:55.36:0,55,560	1/1:3,16:19:44.94:369,45,0	0/1:7,17:24:2.95:340,0,3	0/0:19,2:21:1.75:0,2,405	1/1:6,22:28:56.10:466,56,0	1/1:1,17:18:50.94:419,51,0	0/0:24,0:24:66.15:0,66,696	0/1:2,13:15:2.02:192,0,2	0/0:18,0:20:41.84:0,42,391	0/0:19,0:20:47.95:0,48,488	0/0:30,0:31:68.96:0,69,698	1/1:6,16:22:40.51:342,41,0	1/1:2,17:19:17.17:338,17,0	1/1:1,18:19:18.96:362,19,0	0/0:30,1:31:50.56:0,51,728	0/0:28,1:28:63.15:0,63,666	0/0:31,1:33:65.15:0,65,832	0/0:2,0:2:6.02:0,6,64
chr10	51498934	.	CCTTT	C	286.17	PASS	AB=1.000;AC=10;AF=0.200;AN=50;BaseQRankSum=0.669;DP=516;FS=7.426;HRun=0;HaplotypeScore=126.6360;InbreedingCoeff=0.5630;MQ=44.77;MQ0=57;MQRankSum=2.621;QD=2.49;ReadPosRankSum=0.056;VQSLOD=2.0370;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:26:22.26:0,22,208	0/0:7,0:6:8.83:0,9,58	./.	./.	0/0:29,0:29:41.97:0,42,359	0/0:17,0:13:4.20:0,4,22	0/0:9,0:7:2.90:0,3,16	./.	0/0:34,0:29:44.84:0,45,407	0/0:36,0:34:25.99:0,26,406	0/0:21,0:19:15:0,15,132	0/0:9,0:8:5.88:0,6,36	0/0:13,0:10:2.98:0,3,21	0/0:23,0:19:28.78:0,29,204	0/0:16,0:14:2.61:0,3,18	0/0:13,0:13:5.94:0,6,41	0/0:26,0:24:38.85:0,39,313	0/0:10,0:6:11.90:0,12,87	1/1:12,5:14:14.93:114,15,0	1/1:14,6:18:11.53:66,12,0	0/0:17,0:16:26.74:0,27,197	1/1:16,0:14:2.50:9,2,0	0/1:13,0:9:0:0,0,0	0/1:18,0:15:18.28:18,0,28	0/0:14,0:11:14.94:0,15,124	0/0:25,0:23:33.02:0,33,356	1/1:31,0:30:26.94:218,27,0	0/0:21,0:17:6.01:0,6,78
chr10	51499011	.	C	CTT	1005.96	PASS	AB=0.587;AC=20;AF=0.357;AN=56;BaseQRankSum=12.460;DP=513;FS=1.879;HRun=9;HaplotypeScore=112.5527;InbreedingCoeff=0.7944;MQ=70.84;MQ0=13;MQRankSum=-2.971;QD=5.65;ReadPosRankSum=2.423;VQSLOD=-0.1961;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:56.62:0,57,578	1/1:4,0:6:7.79:30,8,0	0/0:29,0:19:11.01:0,11,264	0/0:20,0:13:24.24:0,24,188	0/0:22,0:22:57.12:0,57,599	1/1:5,10:16:20.41:253,20,0	1/1:6,14:20:12.04:174,12,0	0/0:17,0:16:36.04:0,36,371	0/0:25,0:23:45.08:0,45,478	0/0:24,0:24:44.95:0,45,517	0/0:14,0:14:32.87:0,33,339	1/1:6,0:15:22.81:88,23,0	1/1:4,0:17:36.29:125,36,0	0/0:22,0:22:48.99:0,49,512	1/1:5,0:21:27.85:115,28,0	1/1:1,0:19:44.05:153,44,0	0/0:25,0:24:48.09:0,48,511	1/1:5,0:14:26.70:93,27,0	0/0:23,0:22:54.99:0,55,574	0/0:11,0:11:24.04:0,24,255	0/0:11,0:10:21.01:0,21,224	1/1:3,0:12:19.34:68,19,0	0/1:2,0:13:31.04:61,0,31	0/1:7,0:19:41.71:56,0,42	0/0:15,0:15:36.07:0,36,383	0/0:12,0:11:29.98:0,30,312	0/0:38,0:37:87.12:0,87,917	0/0:2,0:2:2.98:0,3,22
chr10	51499262	.	TA	T	1448.23	PASS	AB=0.846;AC=18;AF=0.321;AN=56;BaseQRankSum=9.409;DP=372;FS=0.534;HRun=10;HaplotypeScore=53.6065;InbreedingCoeff=0.7925;MQ=81.60;MQ0=1;MQRankSum=0.525;QD=16.65;ReadPosRankSum=1.327;VQSLOD=4.0393;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:33.21:0,33,209	1/1:0,6:6:18:156,18,0	0/0:24,0:16:24.55:0,25,236	0/0:16,0:12:12.01:0,12,125	0/0:19,0:19:54.04:0,54,556	0/0:12,0:12:31.22:0,31,160	0/1:9,0:9:22.99:23,0,48	0/0:26,0:26:66.13:0,66,710	0/0:6,0:6:18.01:0,18,181	0/0:15,0:15:39.11:0,39,431	0/0:13,0:13:27.07:0,27,299	1/1:2,5:7:14.99:129,15,0	1/1:2,14:16:44.59:374,45,0	0/0:15,1:16:10.12:0,10,327	1/1:0,10:10:26.99:234,27,0	1/1:2,6:8:17.99:156,18,0	0/0:19,0:19:54.15:0,54,597	1/1:0,11:11:29.97:255,30,0	0/0:11,0:11:33.08:0,33,358	0/0:22,0:23:54.40:0,54,563	0/0:7,0:7:11.98:0,12,133	1/1:1,5:6:11.90:94,12,0	0/1:5,4:9:12.25:127,0,12	1/1:0,5:5:12:104,12,0	0/0:15,0:15:39.09:0,39,423	0/0:11,0:11:27.07:0,27,299	0/0:29,0:29:69.13:0,69,749	0/0:2,0:2:6.02:0,6,66
chr10	51500452	.	TA	T	348.64	PASS	AC=4;AF=0.077;AN=52;BaseQRankSum=3.278;DP=829;FS=0.000;HRun=5;HaplotypeScore=49.0859;InbreedingCoeff=0.7648;MQ=35.32;MQ0=137;MQRankSum=-4.773;QD=7.42;ReadPosRankSum=0.600;VQSLOD=-0.5579;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:16:15.05:0,15,205	0/0:15,0:12:17.67:0,18,240	./.	./.	0/0:48,0:39:41.87:0,42,545	1/1:11,21:19:33.09:374,33,0	1/1:8,7:6:8.98:88,9,0	0/0:41,0:3:9.03:0,9,123	0/0:26,0:20:21.04:0,21,267	0/0:39,0:22:66.21:0,66,887	0/0:41,0:23:21.07:0,21,287	0/0:26,0:20:12.04:0,12,164	0/0:37,0:35:42.09:0,42,549	0/0:24,0:16:9.03:0,9,123	0/0:34,0:27:18.06:0,18,246	0/0:23,0:11:12.04:0,12,164	0/0:42,0:19:14.59:0,15,153	0/0:32,0:18:18:0,18,191	0/0:26,0:10:27.09:0,27,369	0/0:42,0:24:35.86:0,36,415	0/0:35,0:18:5.95:0,6,59	0/0:25,0:16:18.06:0,18,246	0/0:38,0:25:29.93:0,30,325	0/0:35,0:22:21:0,21,264	0/0:29,0:17:18.03:0,18,226	0/0:32,0:25:69.23:0,69,942	0/0:35,0:31:42.14:0,42,568	0/0:18,0:9:6.02:0,6,82
chr10	51505499	.	G	GA	1263.59	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-9.061;DP=766;FS=12.444;HRun=6;HaplotypeScore=68.1600;InbreedingCoeff=0.9976;MQ=78.07;MQ0=0;MQRankSum=-1.698;QD=31.59;ReadPosRankSum=0.293;VQSLOD=3.2288;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,37:40:99:1358,108,0	0/0:14,0:14:42.10:0,42,428	0/0:12,0:11:24.02:0,24,235	0/0:22,0:22:40.63:0,41,399	0/0:31,0:31:84.17:0,84,849	0/0:25,0:25:69.15:0,69,704	0/0:25,0:25:69.14:0,69,697	0/0:37,0:37:99:0,99,1010	0/0:26,0:26:78.15:0,78,788	0/0:32,0:32:93.21:0,93,945	0/0:24,0:24:63.13:0,63,637	0/0:26,0:26:63.14:0,63,643	0/0:34,0:34:99:0,99,1010	0/0:35,0:35:93.21:0,93,949	0/0:29,0:29:78.14:0,78,782	0/0:29,0:29:81.12:0,81,800	0/0:25,0:25:75.17:0,75,765	0/0:14,0:14:36.08:0,36,366	0/0:26,0:25:66.11:0,66,662	0/0:28,0:28:78.16:0,78,789	0/0:16,0:16:36.05:0,36,359	0/0:25,0:25:75.17:0,75,765	0/0:24,0:24:63.14:0,63,643	0/0:28,0:28:72.16:0,72,735	0/0:48,0:48:99:0,135,1377	0/0:35,0:35:93.20:0,93,949	0/0:40,0:40:99:0,111,1133	0/0:16,0:16:48.11:0,48,490
chr10	51506078	.	CCCTCTCCTCTCCTCTCCTCTCCTCT	C	2240.31	PASS	AB=0.795;AC=20;AF=0.385;AN=52;BaseQRankSum=3.244;DP=420;FS=0.000;HRun=0;HaplotypeScore=189.2125;InbreedingCoeff=0.5097;MQ=71.28;MQ0=47;MQRankSum=-3.217;QD=16.35;ReadPosRankSum=1.430;VQSLOD=2.5177;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:10,0:20:16.23:55,0,16	1/1:8,0:7:9:170,9,0	0/0:42,0:21:3:0,3,36	./.	0/0:17,0:16:18.04:0,18,1050	0/0:13,0:13:17.77:0,18,101	0/0:12,0:9:2.08:0,2,68	0/0:29,0:28:17.97:0,18,155	0/0:7,0:3:2.99:0,3,24	0/0:12,0:12:6.02:0,6,369	0/0:6,0:6:9:0,9,418	1/1:10,0:9:21.05:431,21,0	1/1:2,12:14:6.02:389,6,0	0/0:9,0:9:7.36:0,7,55	1/1:5,6:11:3.90:196,4,0	0/1:13,1:13:99:261,0,158	0/0:7,0:5:3:0,3,25	1/1:10,12:21:3.90:186,4,0	0/0:17,0:9:0:0,0,0	0/0:7,0:9:14.98:0,15,485	0/0:19,0:18:18.23:0,18,439	1/1:7,10:17:8.96:249,9,0	1/1:8,0:6:15.01:237,15,0	1/1:4,4:6:3.01:195,3,0	./.	0/0:14,0:11:6.01:0,6,350	1/1:4,0:4:3.01:39,3,0	0/0:15,0:13:17.97:0,18,705
chr10	51506584	.	CT	C	1200.66	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.270;DP=732;FS=2.158;HRun=3;HaplotypeScore=67.2752;InbreedingCoeff=0.9995;MQ=78.07;MQ0=0;MQRankSum=-5.046;QD=33.35;ReadPosRankSum=1.015;VQSLOD=4.2078;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,35:36:99:1296,101,0	0/0:10,0:10:30.09:0,30,414	0/0:20,0:20:57.16:0,57,792	0/0:23,0:22:66.20:0,66,895	0/0:29,0:29:87.26:0,87,1197	0/0:22,0:22:60.20:0,60,860	0/0:26,0:26:75.23:0,75,1055	0/0:36,0:36:93.29:0,93,1286	0/0:22,0:22:66.22:0,66,947	0/0:23,0:23:69.23:0,69,994	0/0:26,0:26:72.22:0,72,1001	0/0:20,0:20:60.20:0,60,864	0/0:27,0:27:81.27:0,81,1159	0/0:21,0:21:63.19:0,63,869	0/0:24,0:24:72.23:0,72,1019	0/0:37,0:37:99:0,111,1579	0/0:25,0:25:75.24:0,75,1062	0/0:19,0:19:51.17:0,51,730	0/0:22,0:22:63.21:0,63,904	0/0:26,0:26:75.25:0,75,1080	0/0:46,0:46:99:0,135,1887	0/0:22,0:22:66.22:0,66,950	0/0:29,0:29:78.26:0,78,1119	0/0:31,0:31:93.31:0,93,1339	0/0:33,0:33:99:0,99,1402	0/0:33,0:33:96.32:0,96,1375	0/0:28,0:28:78.26:0,78,1113	0/0:16,0:16:42.07:0,42,541
chr10	51512772	.	TA	T	584.16	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.155;DP=502;FS=2.876;HRun=7;HaplotypeScore=45.9927;InbreedingCoeff=0.9364;MQ=64.79;MQ0=0;MQRankSum=-0.011;QD=22.47;ReadPosRankSum=-0.386;VQSLOD=3.0035;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,135,1590	0/0:11,0:11:33.10:0,33,403	0/0:12,0:12:21.06:0,21,250	0/0:3,0:3:6.02:0,6,75	0/0:28,0:28:63.20:0,63,793	1/1:1,6:7:18.04:184,18,0	1/1:2,17:19:51.11:520,51,0	0/0:29,0:29:78.23:0,78,955	0/0:13,0:13:33.09:0,33,400	0/0:17,0:17:39.12:0,39,489	0/0:19,0:19:48.15:0,48,600	0/0:13,0:13:39.11:0,39,468	0/0:18,0:18:54.14:0,54,651	0/0:13,0:13:33.06:0,33,397	0/0:20,0:20:54.17:0,54,676	0/0:12,0:12:33.09:0,33,402	0/0:29,0:29:78.22:0,78,965	0/0:25,0:26:65.99:0,66,765	0/0:22,0:22:54.17:0,54,675	0/0:16,0:16:39.12:0,39,491	0/0:13,0:13:27.09:0,27,338	0/0:9,0:9:24.08:0,24,296	0/0:17,0:17:48.15:0,48,602	0/0:13,0:13:33.09:0,33,401	0/0:15,0:15:33.08:0,33,400	0/0:31,0:31:87.28:0,87,1089	0/0:25,0:25:66.21:0,66,828	0/0:6,0:6:18.06:0,18,226
chr10	51513947	.	CCT	C	47.96	PASS	AB=0.825;AC=7;AF=0.125;AN=56;BaseQRankSum=4.861;DP=284;FS=1.305;HRun=0;HaplotypeScore=41.5268;InbreedingCoeff=-0.1518;MQ=64.15;MQ0=11;MQRankSum=-3.844;QD=0.58;ReadPosRankSum=-2.265;VQSLOD=1.1216;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:0.37:0,0,144	0/0:3,0:3:6.49:0,6,103	0/0:20,0:9:26.30:0,26,379	0/1:33,0:10:9.22:9,0,201	0/0:2,0:2:6.02:0,6,103	0/1:8,2:10:37.91:38,0,357	0/0:10,0:9:27:0,27,349	0/0:13,0:12:21.78:0,22,493	0/0:5,0:5:12.03:0,12,153	0/0:9,0:9:12.68:0,13,327	0/1:4,0:4:3.74:4,0,101	0/1:7,2:7:6.35:6,0,119	0/1:4,4:8:6.08:6,0,158	0/0:6,0:6:12.51:0,13,191	0/0:11,2:13:27.04:0,27,389	0/1:10,2:12:28.73:29,0,209	0/0:10,0:9:24.07:0,24,343	0/1:2,4:5:43.30:72,0,43	0/0:5,0:5:14.87:0,15,183	0/0:15,0:14:42.12:0,42,667	0/0:10,0:8:20.86:0,21,318	0/0:12,0:12:32.83:0,33,505	0/0:13,0:13:20.44:0,20,328	0/0:15,0:15:18.30:0,18,475	0/0:7,0:7:18.05:0,18,291	0/0:8,0:8:14.86:0,15,338	0/0:7,0:7:17.05:0,17,264	0/0:10,0:10:30.10:0,30,485
chr10	51514711	.	TAATGAAGA	T	1535.37	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.069;DP=766;FS=7.449;HRun=0;HaplotypeScore=188.6954;InbreedingCoeff=0.9999;MQ=85.66;MQ0=0;MQRankSum=-7.474;QD=43.87;ReadPosRankSum=-0.729;VQSLOD=2.3498;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,28:35:60.21:1630,60,0	0/0:13,0:13:39.13:0,39,1716	0/0:26,0:26:66.22:0,66,2628	0/0:27,0:27:78.26:0,78,3040	0/0:39,0:39:99:0,117,4770	0/0:28,0:28:81.23:0,81,3239	0/0:17,0:17:42.14:0,42,1846	0/0:23,0:23:57.20:0,57,2424	0/0:18,0:18:54.19:0,54,2365	0/0:37,0:37:99:0,105,4347	0/0:20,0:20:54.19:0,54,2275	0/0:30,0:30:84.29:0,84,3577	0/0:36,0:36:99:0,102,4295	0/0:22,0:22:66.23:0,66,2903	0/0:32,0:32:96.30:0,96,3875	0/0:37,0:37:99:0,108,4637	0/0:24,0:24:72.25:0,72,2956	0/0:22,0:22:63.22:0,63,2728	0/0:28,0:28:78.23:0,78,2933	0/0:36,0:36:99:0,108,4509	0/0:27,0:27:78.27:0,78,3176	0/0:32,0:32:93.32:0,93,4052	0/0:25,0:25:75.26:0,75,3174	0/0:35,0:35:99:0,99,4235	0/0:21,0:21:63.22:0,63,2752	0/0:30,0:29:90.31:0,90,3861	0/0:29,0:29:87.30:0,87,3752	0/0:17,0:17:51.18:0,51,2244
chr10	51515155	.	TA	T	2330.03	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=12.342;DP=645;FS=11.810;HRun=2;HaplotypeScore=72.9054;InbreedingCoeff=0.9996;MQ=76.19;MQ0=0;MQRankSum=-4.384;QD=32.82;ReadPosRankSum=2.537;VQSLOD=2.7885;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,29:29:81.26:1040,81,0	0/0:10,0:10:30.10:0,30,450	0/0:17,0:18:41.99:0,42,557	0/0:17,0:17:35.59:0,36,374	0/0:38,0:38:99:0,114,1709	1/1:2,28:30:75.24:970,75,0	1/1:0,12:12:36.12:462,36,0	0/0:28,0:27:72.23:0,72,1060	0/0:20,0:20:57.19:0,57,853	0/0:27,0:27:81.27:0,81,1215	0/0:27,0:27:81.27:0,81,1214	0/0:20,0:20:57.18:0,57,836	0/0:25,0:25:72.23:0,72,1059	0/0:17,0:17:51.17:0,51,765	0/0:23,0:23:69.22:0,69,1014	0/0:19,0:19:57.19:0,57,853	0/0:33,0:33:99:0,99,1460	0/0:27,0:27:78.25:0,78,1147	0/0:23,0:23:66.22:0,66,987	0/0:26,0:26:75.25:0,75,1123	0/0:15,0:15:45.15:0,45,672	0/0:21,0:21:63.21:0,63,943	0/0:23,0:23:69.15:0,69,949	0/0:12,0:12:36.12:0,36,540	0/0:26,0:26:78.26:0,78,1169	0/0:24,0:24:72.24:0,72,1078	0/0:39,0:39:99:0,117,1743	0/0:16,0:16:42.14:0,42,629
chr10	51515159	.	ATT	A	1873.15	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=12.197;DP=654;FS=11.215;HRun=9;HaplotypeScore=87.9810;InbreedingCoeff=0.9842;MQ=73.43;MQ0=0;MQRankSum=-0.453;QD=25.66;ReadPosRankSum=2.451;VQSLOD=2.3626;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,24:30:69.11:776,69,0	0/0:11,0:11:33.11:0,33,534	0/0:15,0:15:27.08:0,27,417	0/0:16,1:16:10.47:0,10,327	0/0:41,0:41:99:0,108,1746	1/1:9,21:30:72.19:825,72,0	1/1:1,12:13:36.10:415,36,0	0/0:26,0:25:54.18:0,54,874	0/0:19,0:19:51.16:0,51,810	0/0:27,0:27:78.26:0,78,1259	0/0:29,0:29:81.26:0,81,1303	0/0:19,0:19:51.17:0,51,837	0/0:24,0:24:60.19:0,60,960	0/0:18,0:18:45.15:0,45,727	0/0:26,0:26:75.26:0,75,1223	0/0:20,0:20:57.16:0,57,864	0/0:32,0:34:98.31:0,98,1544	0/0:27,0:27:60.17:0,60,956	0/0:19,0:21:50.64:0,51,753	0/0:28,0:29:80.75:0,81,1242	0/0:16,0:16:42.12:0,42,641	0/0:24,0:24:72.24:0,72,1158	0/0:23,0:23:63.21:0,63,1010	0/0:12,0:12:36.12:0,36,591	0/0:25,0:25:75.26:0,75,1225	0/0:22,0:23:65.70:0,66,1017	0/0:42,0:42:99:0,126,2042	0/0:13,0:13:39.09:0,39,549
chr10	51515828	.	CATACAATACAATACA	C	3594.65	PASS	AC=14;AF=0.280;AN=50;BaseQRankSum=6.073;DP=687;FS=6.961;HRun=0;HaplotypeScore=256.5953;InbreedingCoeff=0.7794;MQ=79.82;MQ0=11;MQRankSum=-7.592;QD=23.96;ReadPosRankSum=0.117;VQSLOD=1.7733;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:39.12:0,39,2019	1/1:4,2:6:3.01:123,3,0	./.	0/0:53,0:25:0.47:0,0,1	0/0:31,0:29:15.05:0,15,928	0/0:18,0:20:15.04:0,15,425	0/0:17,0:23:15.05:0,15,595	0/0:26,0:26:3:0,3,25	0/0:25,0:26:36.12:0,36,2239	0/0:18,0:18:21.07:0,21,1172	0/0:19,0:19:12.93:0,13,733	1/1:15,9:24:18.06:702,18,0	1/1:15,3:18:6.02:246,6,0	0/0:29,0:29:27.09:0,27,1699	1/1:17,9:26:24.08:983,24,0	1/1:28,11:39:30.10:1229,30,0	0/0:25,0:25:39.13:0,39,2537	./.	0/0:22,0:24:12.04:0,12,384	0/0:23,0:26:18.04:0,18,581	0/0:25,0:31:16.61:0,17,445	1/1:13,3:16:6.02:195,6,0	./.	1/1:21,0:21:1.30:117,1,0	0/0:14,0:14:9.02:0,9,261	0/0:21,0:21:12.04:0,12,471	0/0:25,0:35:51.17:0,51,1881	0/0:18,0:18:36.12:0,36,2050
chr10	51517576	.	T	TTAGTG	15764.09	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-12.571;DP=592;FS=18.021;HRun=0;HaplotypeScore=103.8189;InbreedingCoeff=0.9944;MQ=72.04;MQ0=0;MQRankSum=-6.128;QD=75.79;ReadPosRankSum=3.778;VQSLOD=5.6146;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,29:34:78.27:2517,78,0	1/1:3,6:11:21.07:635,21,0	0/0:17,0:17:45.15:0,45,886	0/0:5,0:5:15.05:0,15,321	0/0:24,0:24:69.24:0,69,1511	0/0:19,0:19:57.11:0,57,1170	0/0:19,0:19:54.14:0,54,1135	0/0:32,0:32:96.30:0,96,2082	0/0:18,0:18:48.16:0,48,1063	0/0:21,0:21:60.21:0,60,1324	0/0:26,0:26:75.25:0,75,1572	1/1:2,16:18:48.16:1458,48,0	1/1:4,17:22:60.21:1827,60,0	0/0:13,0:13:30.57:0,31,655	1/1:2,23:26:66.23:2129,66,0	1/1:5,9:14:27.09:827,27,0	0/0:24,0:24:72.25:0,72,1597	1/1:2,13:17:39.13:1151,39,0	0/0:20,0:20:60.19:0,60,1223	0/0:33,0:33:99:0,99,2185	0/0:16,0:16:39.13:0,39,870	1/1:2,27:31:87.30:2644,87,0	1/1:2,18:20:54.19:1654,54,0	1/1:1,14:15:30.10:922,30,0	0/0:41,0:41:99:0,123,2675	0/0:29,0:29:84.29:0,84,1865	0/0:22,0:22:57.20:0,57,1264	0/0:5,0:5:15.05:0,15,335
chr10	51517648	.	TTCTCTCTC	T	637.71	PASS	AB=1.000;AC=19;AF=0.500;AN=38;BaseQRankSum=3.104;DP=469;FS=26.578;HRun=0;HaplotypeScore=115.1061;InbreedingCoeff=0.4149;MQ=60.82;MQ0=15;MQRankSum=1.862;QD=4.59;ReadPosRankSum=4.123;VQSLOD=-0.0917;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	0/0:33,0:17:0:0,0,0	./.	1/1:16,0:20:6.02:107,6,0	1/1:18,0:18:0.89:2,1,0	0/0:37,0:34:6.95:0,7,36	0/0:5,4:9:3.01:0,3,34	0/0:12,0:11:1.36:0,1,3	./.	1/1:9,2:12:6:72,6,0	1/1:9,1:11:6:69,6,0	0/1:11,0:11:37.72:38,0,78	1/1:14,1:15:9.02:147,9,0	1/1:10,1:13:5.32:121,5,0	0/0:14,0:15:2.99:0,3,24	1/1:8,0:8:3.01:71,3,0	./.	./.	0/0:23,0:21:3.01:0,3,31	1/1:11,0:12:3.01:63,3,0	./.	./.	1/1:17,0:16:3.01:73,3,0	0/0:35,0:35:6.07:0,6,97	0/0:20,0:19:7.84:0,8,168	0/0:13,0:12:9.03:0,9,243
chr10	51517720	.	GACAC	G	420.25	PASS	AB=0.870;AC=5;AF=0.089;AN=56;BaseQRankSum=3.355;DP=615;FS=1.135;HRun=0;HaplotypeScore=110.1612;InbreedingCoeff=0.6190;MQ=50.06;MQ0=35;MQRankSum=-0.505;QD=7.64;ReadPosRankSum=1.080;VQSLOD=2.6012;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:23:34.06:0,34,780	0/0:6,0:6:18.04:0,18,245	0/0:87,0:18:29.35:0,29,499	0/0:99,0:19:19.24:0,19,245	0/0:18,0:18:48.11:0,48,1035	1/1:13,10:24:27.09:427,27,0	1/1:5,6:11:6.33:101,6,0	0/0:23,0:23:49.41:0,49,1051	0/0:19,0:19:38.74:0,39,732	0/0:20,0:20:53.92:0,54,1217	0/0:20,0:20:41.71:0,42,873	0/0:12,0:12:3.01:0,3,47	0/0:14,0:13:17.53:0,18,201	0/0:18,0:17:33.09:0,33,763	0/0:14,0:13:11.98:0,12,202	0/0:19,0:19:6.02:0,6,72	0/0:22,0:22:51.16:0,51,1113	0/0:11,0:10:14.97:0,15,157	0/0:22,0:20:47.88:0,48,882	0/0:20,0:20:51.17:0,51,1254	0/0:20,0:19:36.10:0,36,792	0/0:9,0:9:0:0,0,0	0/0:12,0:12:18.52:0,19,264	0/0:14,0:14:15.02:0,15,219	0/0:11,0:11:26.92:0,27,609	0/0:18,0:18:48.10:0,48,1075	0/1:17,1:19:8.46:8,0,739	0/0:6,0:6:12.02:0,12,217
chr10	51518042	.	TGAC	T	2771.99	PASS	AC=18;AF=0.333;AN=54;BaseQRankSum=12.419;DP=531;FS=2.199;HRun=0;HaplotypeScore=167.1335;InbreedingCoeff=0.9580;MQ=85.87;MQ0=1;MQRankSum=-12.114;QD=36.96;ReadPosRankSum=5.993;VQSLOD=4.5232;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,6:7:17.85:255,18,0	./.	0/0:25,0:25:72.25:0,72,1684	0/0:17,0:17:50.90:0,51,1086	0/0:33,0:33:96.33:0,96,2348	0/0:25,0:25:75.26:0,75,1842	0/0:19,0:19:57.20:0,57,1404	0/0:44,0:44:99:0,132,3060	0/0:24,0:24:72.25:0,72,1749	0/0:39,0:39:99:0,117,2803	0/0:20,0:20:60.20:0,60,1430	1/1:1,7:8:24.07:366,24,0	1/1:1,7:8:24.08:371,24,0	0/0:26,0:26:78.27:0,78,1887	1/1:2,12:14:42.12:630,42,0	1/1:0,12:13:39.13:617,39,0	0/0:29,0:29:87.30:0,87,2143	1/1:1,1:2:5.99:70,6,0	0/0:22,0:22:66.23:0,66,1623	0/0:25,0:25:72.25:0,72,1757	0/0:29,0:29:78.27:0,78,1922	1/1:0,13:13:29.93:428,30,0	1/1:0,5:5:12.04:176,12,0	1/1:0,4:4:5.91:64,6,0	0/0:23,0:23:69.22:0,69,1625	0/0:23,0:23:69.24:0,69,1702	0/0:25,0:24:75.26:0,75,1847	0/0:7,0:7:21.07:0,21,518
chr10	51518048	.	AGT	A	1139.42	PASS	AB=0.500;AC=16;AF=0.296;AN=54;BaseQRankSum=12.536;DP=518;FS=0.502;HRun=0;HaplotypeScore=160.4856;InbreedingCoeff=0.8468;MQ=89.84;MQ0=1;MQRankSum=-11.757;QD=16.51;ReadPosRankSum=7.029;VQSLOD=3.3618;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:0,6:6:1.60:105,0,2	./.	0/0:28,0:28:63.53:0,64,1444	0/0:20,0:19:53.77:0,54,950	0/0:35,0:35:99:0,105,2083	0/0:25,0:25:75.26:0,75,1511	0/0:18,0:18:54.19:0,54,1097	0/0:40,0:40:99:0,120,2375	0/0:25,0:25:75.26:0,75,1524	0/0:38,0:38:99:0,114,2280	0/0:19,0:19:57.20:0,57,1157	1/1:0,7:7:20.96:171,21,0	1/1:2,7:8:9.72:155,10,0	0/0:28,0:28:84.29:0,84,1666	1/1:0,12:12:35.91:289,36,0	1/1:1,12:13:38.42:302,38,0	0/0:28,0:28:84.29:0,84,1695	1/1:0,1:1:3:27,3,0	0/0:22,0:22:66.21:0,66,1274	0/0:22,0:22:63.22:0,63,1280	0/0:26,0:26:72.23:0,72,1426	1/1:0,12:12:22.77:185,23,0	1/1:0,5:5:11.74:77,12,0	0/1:0,4:4:2.65:17,0,3	0/0:19,0:19:57.20:0,57,1158	0/0:23,0:23:69.24:0,69,1403	0/0:24,0:23:72.23:0,72,1422	0/0:9,0:9:27.09:0,27,547
chr10	51518052	.	ACCTTGTAAGATGCAGGAGCTTTCGTTTTCT	A	13306.67	PASS	AC=18;AF=0.333;AN=54;BaseQRankSum=12.940;DP=505;FS=0.000;HRun=0;HaplotypeScore=426.3364;InbreedingCoeff=0.9528;MQ=87.95;MQ0=0;MQRankSum=-12.824;QD=201.62;ReadPosRankSum=6.163;VQSLOD=3.7320;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,6:6:18.06:1272,18,0	./.	0/0:26,0:27:74.91:0,75,4338	0/0:16,0:16:40.51:0,41,2155	0/0:34,0:34:99:0,102,12706	0/0:26,0:26:78.27:0,78,9293	0/0:17,0:17:51.18:0,51,5056	0/0:35,0:35:99:0,105,8518	0/0:25,0:25:75.26:0,75,9340	0/0:36,0:36:99:0,108,11739	0/0:20,0:20:60.21:0,60,7834	1/1:0,7:7:21.07:1541,21,0	1/1:0,7:7:21.07:1538,21,0	0/0:28,0:28:84.29:0,84,10389	1/1:0,12:12:36.12:2638,36,0	1/1:0,12:12:36.12:2641,36,0	0/0:29,0:29:87.30:0,87,10086	1/1:0,1:1:3.01:222,3,0	0/0:22,0:22:66.23:0,66,6897	0/0:22,0:22:66.23:0,66,6640	0/0:25,0:25:69.22:0,69,6745	1/1:0,12:12:33.11:2249,33,0	1/1:0,5:5:15.05:972,15,0	1/1:0,4:4:7.16:232,7,0	0/0:19,0:19:57.20:0,57,6935	0/0:24,0:24:72.25:0,72,8456	0/0:23,0:23:69.24:0,69,8214	0/0:10,0:10:30.10:0,30,3954
chr10	51518075	.	C	CA	117	PASS	AB=0.803;AC=6;AF=0.111;AN=54;BaseQRankSum=5.530;DP=525;FS=0.000;HRun=0;HaplotypeScore=156.8294;InbreedingCoeff=0.5457;MQ=90.97;MQ0=0;MQRankSum=-4.330;QD=3.16;ReadPosRankSum=-1.081;VQSLOD=3.1926;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:6,1:7:4.53:0,5,16	./.	0/0:27,0:27:36.15:0,36,892	0/0:20,0:21:52.49:0,52,625	0/0:32,0:32:96.32:0,96,1340	0/0:24,0:24:72.24:0,72,1006	0/0:18,0:18:48.12:0,48,648	0/0:34,0:34:99:0,102,1400	0/0:25,0:25:72.24:0,72,1006	0/0:36,0:36:99:0,105,1444	0/0:26,0:26:72.24:0,72,1002	0/1:7,2:9:21.59:22,0,22	0/0:7,0:7:14.04:0,14,39	0/0:29,0:29:87.29:0,87,1196	0/0:12,0:12:23.12:0,23,67	0/0:12,0:12:24.22:0,24,66	0/0:31,0:31:90.26:0,90,1221	0/1:1,1:2:0.63:33,0,1	0/0:26,0:26:78.24:0,78,1063	0/0:27,0:27:81.27:0,81,1109	0/0:17,0:17:51.17:0,51,702	0/1:12,0:12:0.30:60,0,0	1/1:5,1:6:10.06:93,10,0	0/1:5,3:8:0.86:34,0,1	0/0:20,0:20:60.20:0,60,837	0/0:24,0:24:72.23:0,72,988	0/0:21,0:21:60.20:0,60,838	0/0:11,0:11:30.10:0,30,411
chr10	51518640	.	T	TCACACACACA	6986.88	PASS	AB=1.000;AC=25;AF=0.446;AN=56;BaseQRankSum=7.723;DP=783;FS=17.267;HRun=0;HaplotypeScore=219.5852;InbreedingCoeff=0.8801;MQ=54.92;MQ0=15;MQRankSum=-11.996;QD=23.21;ReadPosRankSum=-0.289;VQSLOD=2.5571;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:3,0:30:21.07:549,21,0	1/1:13,3:16:12.04:468,12,0	0/0:48,0:27:44.19:0,44,1410	0/0:39,0:29:22.20:0,22,1168	0/0:19,0:19:48.46:0,48,1274	1/1:5,7:17:6.02:252,6,0	1/1:8,25:44:23.99:658,24,0	0/0:42,0:42:99:0,108,1911	0/0:35,0:35:92.84:0,93,2439	0/0:28,0:28:72.96:0,73,2291	0/1:20,0:19:2.92:3,0,1118	1/1:18,3:21:38.22:843,38,0	1/1:5,14:20:11.64:402,12,0	0/0:29,0:29:72.18:0,72,1985	1/1:4,13:19:21.07:786,21,0	1/1:2,19:26:30.10:1356,30,0	0/0:39,0:39:76.82:0,77,2733	1/1:8,0:8:11.99:320,12,0	0/0:30,0:29:75.08:0,75,1428	0/0:25,0:25:63.14:0,63,1769	0/0:51,0:49:99:0,121,3068	1/1:4,23:33:12.04:414,12,0	1/1:4,14:23:18.05:631,18,0	1/1:2,18:24:5.52:304,6,0	0/0:27,0:27:63.16:0,63,1639	0/0:26,0:26:69.18:0,69,1619	0/0:31,0:31:59.13:0,59,1854	0/0:12,0:10:4.02:0,4,589
chr10	51518654	.	ATATT	A	1577.01	PASS	AB=0.886;AC=14;AF=0.250;AN=56;BaseQRankSum=9.960;DP=751;FS=31.572;HRun=0;HaplotypeScore=170.3660;InbreedingCoeff=0.2103;MQ=50.82;MQ0=18;MQRankSum=-9.514;QD=6.57;ReadPosRankSum=-3.461;VQSLOD=0.6174;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:28,1:28:68.48:227,0,68	0/1:11,5:16:1.62:2,0,187	0/0:60,0:28:56.97:0,57,1902	0/0:47,0:27:78.06:0,78,1739	0/0:22,0:22:56.74:0,57,1554	0/1:12,3:15:53.35:53,0,105	0/1:33,3:36:84.49:263,0,84	0/0:33,0:33:99:0,99,2488	0/0:34,0:34:99:0,102,2713	0/0:28,0:28:84.29:0,84,2363	0/0:22,1:22:56.88:0,57,1246	0/1:14,6:20:99:250,0,226	0/1:13,1:14:76.51:91,0,77	0/0:27,0:27:80.97:0,81,2090	1/1:18,0:19:13.07:229,13,0	0/1:25,1:26:99:153,0,158	0/0:44,0:44:91.40:0,91,3421	0/0:6,1:7:18.02:0,18,364	0/0:24,0:21:63.20:0,63,1581	0/0:25,0:25:69.20:0,69,1901	0/0:48,0:47:99:0,128,3437	0/1:27,2:29:22.91:176,0,23	1/1:18,1:19:12.02:249,12,0	1/1:17,0:17:4.45:48,4,0	0/0:25,0:25:60.21:0,60,1646	0/0:25,0:25:72.24:0,72,1976	0/0:21,0:21:63.22:0,63,1770	0/0:17,0:14:16.80:0,17,849
chr10	51518680	.	T	TCACACA	2204.95	PASS	AB=1.000;AC=32;AF=0.593;AN=54;BaseQRankSum=2.298;DP=715;FS=0.000;HRun=0;HaplotypeScore=210.1817;InbreedingCoeff=0.6638;MQ=47.50;MQ0=22;MQRankSum=-2.495;QD=5.55;ReadPosRankSum=-4.084;VQSLOD=1.1485;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:23:1.74:66,2,0	1/1:12,1:13:3.01:96,3,0	./.	0/1:43,0:19:0:0,0,0	0/0:22,0:23:19.69:0,20,349	1/1:18,0:18:13.73:151,14,0	1/1:25,0:24:9.03:132,9,0	0/1:21,0:21:0:0,0,0	0/0:34,0:35:26.40:0,26,512	1/1:13,0:22:27.55:370,28,0	1/1:15,0:25:5.64:70,6,0	1/1:26,4:35:12.59:353,13,0	1/1:11,0:11:7.42:125,7,0	0/0:18,0:21:21.07:0,21,373	1/1:22,0:22:9.03:170,9,0	1/1:29,2:31:4.11:314,4,0	0/0:41,0:43:59.68:0,60,1074	1/1:10,3:13:6.91:144,7,0	0/0:18,0:14:3.01:0,3,61	0/0:21,0:22:26.14:0,26,447	0/0:52,0:48:2.20:0,2,258	1/1:27,0:27:1.98:25,2,0	1/1:20,0:21:4.40:110,4,0	1/1:20,1:21:9.50:213,10,0	0/0:15,0:25:10.89:0,11,53	1/1:21,0:20:2.95:44,3,0	0/0:19,0:19:15.05:0,15,300	0/0:13,0:12:18.06:0,18,310
chr10	51518721	.	CGT	C	3934.28	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=3.649;DP=638;FS=34.266;HRun=0;HaplotypeScore=112.4338;InbreedingCoeff=0.9840;MQ=67.15;MQ0=10;MQRankSum=-3.138;QD=26.58;ReadPosRankSum=0.295;VQSLOD=2.3734;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:24.03:0,24,350	1/1:4,0:5:7.51:116,8,0	0/0:39,0:24:60.08:0,60,1102	0/0:37,0:27:75.24:0,75,1156	0/0:25,0:25:53.28:0,53,852	0/0:18,0:18:19.74:0,20,508	0/0:19,0:19:30.10:0,30,461	0/0:25,0:24:69.24:0,69,1157	0/0:26,0:26:68.82:0,69,1095	0/0:22,0:22:59.56:0,60,995	0/0:20,0:19:39.12:0,39,563	1/1:23,1:24:41.86:399,42,0	1/1:17,3:20:59.33:722,59,0	0/0:15,0:15:36.90:0,37,585	1/1:11,4:15:33.10:439,33,0	1/1:23,2:25:49.67:815,50,0	0/0:41,0:40:99:0,108,1640	1/1:8,0:8:17.97:216,18,0	0/0:15,0:14:33.09:0,33,529	0/0:26,0:26:72.22:0,72,1192	0/0:46,0:45:99:0,101,1542	1/1:14,2:16:38.68:523,39,0	1/1:15,2:17:33.09:434,33,0	1/1:16,2:18:23.53:271,24,0	0/0:25,0:25:51:0,51,768	0/0:24,0:24:22.15:0,22,681	0/0:17,0:17:50.19:0,50,766	0/0:26,0:25:36.45:0,36,910
chr10	51519002	.	G	GA	6038.13	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-13.478;DP=601;FS=3.942;HRun=8;HaplotypeScore=55.8741;InbreedingCoeff=0.9880;MQ=73.61;MQ0=0;MQRankSum=-0.785;QD=28.62;ReadPosRankSum=3.552;VQSLOD=5.2125;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,24:27:69.21:796,69,0	1/1:2,9:11:27.08:312,27,0	0/0:13,0:13:23.68:0,24,203	0/0:13,0:13:16.38:0,16,268	0/0:29,0:29:78.04:0,78,714	0/0:4,0:23:38.70:0,39,114	0/0:0,0:17:26.48:0,26,78	0/0:33,0:33:87:0,87,784	0/0:21,0:21:60.03:0,60,549	0/0:21,0:21:51.02:0,51,467	0/0:25,0:25:63.03:0,63,576	1/1:5,20:25:60.18:693,60,0	1/1:2,24:26:72.21:831,72,0	0/0:19,0:19:51.02:0,51,467	1/1:0,17:17:51.15:589,51,0	1/1:0,19:19:54.16:623,54,0	0/0:19,0:19:51.02:0,51,467	1/1:2,23:25:63.19:727,63,0	0/0:24,0:24:60.02:0,60,549	0/0:19,0:19:39.02:0,39,357	0/0:17,0:17:48.03:0,48,439	1/1:4,14:18:8.64:353,9,0	1/1:7,22:29:41.74:734,42,0	1/1:2,12:14:33.10:381,33,0	0/0:24,0:24:63.02:0,63,577	0/0:22,1:23:28.41:0,28,515	0/0:37,0:37:96.03:0,96,873	0/0:13,0:13:33.02:0,33,302
chr10	51520820	.	ACG	A	2077.08	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=2.294;DP=688;FS=8.662;HRun=0;HaplotypeScore=98.4830;InbreedingCoeff=0.9986;MQ=83.30;MQ0=0;MQRankSum=-1.093;QD=39.19;ReadPosRankSum=-0.194;VQSLOD=5.2436;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:25:75.20:0,75,1317	0/0:9,0:9:26.96:0,27,395	0/0:20,0:20:25.37:0,25,706	0/0:22,0:22:37.68:0,38,895	0/0:20,0:20:60.21:0,60,1210	1/1:0,25:25:63.22:1026,63,0	1/1:0,28:28:72.25:1173,72,0	0/0:36,0:36:99:0,105,1902	0/0:27,0:27:81.26:0,81,1585	0/0:23,0:23:68.04:0,68,1341	0/0:29,0:29:84.17:0,84,1547	0/0:23,0:23:69.22:0,69,1259	0/0:25,0:25:75.21:0,75,1297	0/0:27,0:27:81.19:0,81,1481	0/0:32,0:32:96.26:0,96,1667	0/0:22,0:22:66.14:0,66,1131	0/0:17,0:17:51.11:0,51,954	0/0:24,0:24:72.17:0,72,1250	0/0:15,0:15:45.10:0,45,845	0/0:32,0:32:96.19:0,96,1717	0/0:23,0:23:69.18:0,69,1319	0/0:28,0:28:84.29:0,84,1565	0/0:26,0:26:75.20:0,75,1328	0/0:22,0:22:66.21:0,66,1177	0/0:34,0:34:99:0,102,2063	0/0:31,0:31:93.08:0,93,1649	0/0:30,0:30:90.31:0,90,1778	0/0:12,0:12:36.08:0,36,676
chr10	51521697	.	TG	T	1076.03	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.670;DP=711;FS=0.719;HRun=1;HaplotypeScore=81.5976;InbreedingCoeff=0.9985;MQ=81.53;MQ0=0;MQRankSum=-4.023;QD=34.71;ReadPosRankSum=1.721;VQSLOD=3.7620;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,31:31:84.28:1171,84,0	0/0:9,0:9:27.09:0,27,422	0/0:23,0:23:69.21:0,69,1011	0/0:15,0:15:45.13:0,45,642	0/0:32,0:32:96.24:0,96,1470	0/0:23,0:23:69.17:0,69,987	0/0:30,0:30:90.28:0,90,1359	0/0:45,0:45:99:0,132,1964	0/0:26,0:26:78.25:0,78,1197	0/0:35,0:35:99:0,105,1617	0/0:11,0:11:33.10:0,33,494	0/0:29,0:29:87.30:0,87,1358	0/0:38,0:38:99:0,114,1731	0/0:12,0:12:36.11:0,36,539	0/0:32,0:32:96.33:0,96,1488	0/0:25,0:25:75.26:0,75,1167	0/0:15,0:15:45.11:0,45,657	0/0:23,0:23:66.16:0,66,982	0/0:22,0:22:63.19:0,63,928	0/0:28,0:28:81.24:0,81,1209	0/0:27,0:27:81.26:0,81,1243	0/0:30,0:30:90.30:0,90,1392	0/0:24,0:24:72.21:0,72,1072	0/0:22,0:22:66.22:0,66,1005	0/0:18,0:18:54.18:0,54,845	0/0:27,0:27:81.24:0,81,1205	0/0:46,0:46:99:0,138,2084	0/0:13,0:13:39.11:0,39,576
chr10	51522060	.	A	AT	7879.45	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-16.776;DP=775;FS=0.302;HRun=5;HaplotypeScore=70.2462;InbreedingCoeff=0.9908;MQ=93.26;MQ0=0;MQRankSum=-6.946;QD=32.43;ReadPosRankSum=4.999;VQSLOD=5.0992;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:56:99:0,153,1613	1/1:1,10:11:33.11:430,33,0	0/0:24,0:24:63.15:0,63,671	0/0:41,0:41:99:0,99,1001	0/0:25,0:25:72.17:0,72,766	0/0:22,0:22:60.12:0,60,629	0/0:33,0:33:84.16:0,84,878	0/0:23,0:23:61.96:0,62,644	0/0:27,0:27:66.08:0,66,687	0/0:38,0:38:99:0,108,1142	0/0:18,0:18:48.12:0,48,516	1/1:2,32:34:84.27:1105,84,0	1/1:2,30:32:78.25:1026,78,0	0/0:24,0:24:69.12:0,69,728	1/1:1,31:33:81.26:1066,81,0	1/1:4,21:25:48.16:631,48,0	0/0:49,0:49:99:0,132,1369	1/1:2,27:29:78.25:1026,78,0	0/0:20,0:20:57.06:0,57,572	0/0:30,0:30:78.18:0,78,830	0/0:30,0:30:78.20:0,78,838	1/1:0,21:21:54.18:710,54,0	1/1:1,19:20:57.18:741,57,0	1/1:2,36:38:87.28:1145,87,0	0/0:18,0:18:45.10:0,45,477	0/0:38,0:38:99:0,111,1166	0/0:10,0:10:30.08:0,30,322	0/0:6,0:6:9.02:0,9,97
chr10	51523609	.	C	CAA	1189.01	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=0.276;DP=622;FS=3.342;HRun=10;HaplotypeScore=74.5941;InbreedingCoeff=0.9933;MQ=77.34;MQ0=0;MQRankSum=-3.907;QD=16.99;ReadPosRankSum=0.909;VQSLOD=2.3355;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,0:29:22.40:145,22,0	0/0:8,0:8:21.01:0,21,207	0/0:20,0:20:34.19:0,34,378	0/0:13,0:13:23.29:0,23,181	0/0:28,0:30:71.83:0,72,700	1/1:2,14:21:42.50:560,43,0	1/1:4,16:20:42.14:626,42,0	0/0:27,0:27:63.07:0,63,622	0/0:21,0:21:48.02:0,48,471	0/0:28,0:29:65.85:0,66,652	0/0:15,0:15:42.08:0,42,427	0/0:28,0:28:63.05:0,63,620	0/0:18,0:20:35.77:0,36,404	0/0:19,0:20:56.86:0,57,561	0/0:23,0:23:66.15:0,66,671	0/0:18,0:18:48.08:0,48,488	0/0:19,0:21:41.78:0,42,471	0/0:21,0:21:54.09:0,54,542	0/0:27,0:27:63.01:0,63,603	0/0:30,0:30:75.10:0,75,755	0/0:17,0:17:45.07:0,45,457	0/0:24,0:24:69.14:0,69,694	0/0:27,0:29:74.58:0,75,719	0/0:24,0:24:60.06:0,60,602	0/0:22,0:22:45.06:0,45,445	0/0:19,0:19:48.09:0,48,488	0/0:31,0:32:59.74:0,60,647	0/0:14,0:14:17.70:0,18,164
chr10	51523864	.	AT	A	9220.99	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=16.574;DP=738;FS=7.347;HRun=5;HaplotypeScore=79.6033;InbreedingCoeff=0.9918;MQ=89.79;MQ0=0;MQRankSum=-2.972;QD=30.63;ReadPosRankSum=2.789;VQSLOD=5.4856;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,49:51:99:1531,135,0	1/1:1,3:4:9.02:102,9,0	0/0:36,0:36:94.48:0,94,1203	0/0:19,0:19:44.98:0,45,568	0/0:18,0:18:54.18:0,54,738	1/1:1,24:25:66.19:748,66,0	1/1:0,26:26:72.21:817,72,0	0/0:28,0:28:81.24:0,81,1067	0/0:30,0:30:87.29:0,87,1189	0/0:27,0:27:75.24:0,75,1012	0/0:19,0:19:54.17:0,54,724	1/1:0,26:26:75.21:850,75,0	1/1:3,25:28:69.19:783,69,0	0/0:28,0:28:81.25:0,81,1087	1/1:1,33:34:90.26:1021,90,0	1/1:1,26:27:78.22:885,78,0	0/0:30,0:30:81.26:0,81,1093	1/1:0,15:15:42.12:476,42,0	0/0:37,0:37:99:0,99,1337	0/0:27,0:27:75.24:0,75,1010	0/0:33,0:33:96.32:0,96,1314	1/1:1,17:18:51.15:579,51,0	1/1:1,20:21:54.13:612,54,0	1/1:1,25:26:72.21:817,72,0	0/0:30,0:30:87.29:0,87,1189	0/0:35,0:35:99:0,99,1326	0/0:29,0:29:87.29:0,87,1190	0/0:11,0:11:30.09:0,30,394
chr10	51524455	.	T	TCACA	851.57	PASS	AB=0.955;AC=18;AF=0.375;AN=48;BaseQRankSum=-1.241;DP=477;FS=0.933;HRun=0;HaplotypeScore=94.7339;InbreedingCoeff=0.5143;MQ=65.13;MQ0=5;MQRankSum=2.211;QD=5.87;ReadPosRankSum=-1.876;VQSLOD=1.9992;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	1/1:2,2:5:3.01:70,3,0	./.	./.	0/0:27,0:26:9:0,9,117	0/0:13,0:12:9.01:0,9,116	0/0:19,0:24:18.52:0,19,241	0/0:22,0:22:2.74:0,3,12	./.	0/1:19,0:19:10.94:11,0,125	0/0:17,0:17:3.01:0,3,46	1/1:7,0:7:9.03:131,9,0	1/1:7,2:10:7.84:145,8,0	0/1:9,0:10:6.45:6,0,41	1/1:8,4:16:3.01:71,3,0	1/1:14,3:20:8.55:96,9,0	0/0:19,0:20:15.04:0,15,213	0/0:13,0:25:26.52:0,27,233	0/0:10,0:9:3.01:0,3,46	0/0:15,0:16:7.14:0,7,159	0/0:22,0:21:2.88:0,3,46	1/1:17,3:20:3.01:70,3,0	1/1:16,0:16:15.04:248,15,0	1/1:10,7:21:8.66:162,9,0	0/0:16,0:16:12.04:0,12,184	0/0:18,0:22:5.73:0,6,52	0/0:18,0:18:9.03:0,9,139	0/0:4,0:8:9.01:0,9,84
chr10	51524586	.	T	TTTTGTGTG	4033.51	PASS	AB=0.930;AC=15;AF=0.268;AN=56;BaseQRankSum=4.730;DP=538;FS=7.401;HRun=0;HaplotypeScore=145.9008;InbreedingCoeff=0.0171;MQ=59.21;MQ0=10;MQRankSum=-10.038;QD=17.69;ReadPosRankSum=-4.144;VQSLOD=1.1810;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:18,0:16:51.44:51,0,68	0/1:7,0:9:6.80:487,0,7	0/0:26,0:13:19.04:0,19,229	0/0:13,0:8:16.90:0,17,169	0/0:22,0:22:60.09:0,60,1211	1/1:5,8:15:16.61:578,17,0	1/1:3,16:23:17.80:569,18,0	0/0:25,0:24:69.12:0,69,1003	0/1:15,0:15:20.67:21,0,685	0/0:16,0:16:45.04:0,45,694	0/0:8,0:8:24.04:0,24,502	0/1:13,0:9:72.56:89,0,73	0/1:17,0:16:99:100,0,136	0/0:22,0:22:32.49:0,32,1145	0/1:18,0:28:99:905,0,200	0/1:13,0:21:79.25:856,0,79	0/1:19,0:19:10.68:11,0,892	0/1:16,0:15:99:186,0,118	0/0:23,0:21:55.50:0,55,857	0/0:21,0:21:57.04:0,57,982	0/0:30,0:30:86.98:0,87,1646	0/1:14,0:13:74.09:74,0,96	0/1:18,0:18:72.50:108,0,73	0/0:18,0:18:14.66:0,15,111	0/0:15,0:15:39.56:0,40,841	0/0:27,0:30:84.44:0,84,1516	0/0:27,0:27:78.16:0,78,1750	0/0:13,0:13:30.02:0,30,568
chr10	51525771	.	C	CT	2426.06	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-12.264;DP=794;FS=4.809;HRun=8;HaplotypeScore=79.1132;InbreedingCoeff=0.9992;MQ=78.50;MQ0=1;MQRankSum=-0.754;QD=24.76;ReadPosRankSum=2.338;VQSLOD=4.5571;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,42:44:92.89:1323,93,0	0/0:25,0:25:62.99:0,63,570	0/0:25,0:26:58.85:0,59,501	0/0:14,0:13:27.01:0,27,247	0/0:24,0:24:60.03:0,60,549	1/1:4,27:31:63.19:727,63,0	1/1:5,18:23:45.13:519,45,0	0/0:35,0:35:87.04:0,87,796	0/0:28,0:28:78.03:0,78,714	0/0:29,1:30:40.64:0,41,617	0/0:23,0:23:66.04:0,66,604	0/0:36,0:36:87.02:0,87,790	0/0:34,0:35:83.06:0,83,747	0/0:30,0:30:87.05:0,87,796	0/0:35,0:35:75.02:0,75,686	0/0:28,0:28:66.03:0,66,604	0/0:35,0:35:96.03:0,96,873	0/0:27,0:27:66:0,66,596	0/0:23,0:22:51.02:0,51,466	0/0:20,0:20:54.02:0,54,490	0/0:19,0:19:48.02:0,48,439	0/0:23,0:23:60:0,60,540	0/0:28,0:28:53.99:0,54,489	0/0:33,0:33:90.05:0,90,823	0/0:27,0:27:78.02:0,78,709	0/0:40,0:40:99:0,117,1071	0/0:43,0:43:99:0,117,1062	0/0:9,0:9:27.01:0,27,247
chr10	51525834	.	G	GGGA	9564.63	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-15.390;DP=796;FS=2.424;HRun=0;HaplotypeScore=110.6060;InbreedingCoeff=0.9604;MQ=66.61;MQ0=3;MQRankSum=-4.308;QD=36.65;ReadPosRankSum=5.024;VQSLOD=5.5363;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,99,1421	1/1:5,5:11:6.02:123,6,0	0/0:31,0:25:35.59:0,36,378	0/0:35,0:31:44.21:0,44,560	0/0:22,0:22:54.18:0,54,786	0/0:23,0:23:44.33:0,44,732	0/0:25,0:25:72.24:0,72,1049	0/0:22,0:22:45.13:0,45,591	0/0:27,0:27:69.22:0,69,983	0/0:29,0:29:54.18:0,54,786	0/0:19,0:19:53.20:0,53,732	1/1:4,23:27:10.53:1005,11,0	1/1:12,22:35:68.72:1351,69,0	0/0:27,0:27:66.22:0,66,961	1/1:5,34:39:81.28:1660,81,0	1/1:9,25:35:63.22:1296,63,0	0/0:47,0:47:99:0,114,1622	1/1:7,19:26:36.12:736,36,0	0/0:28,0:28:54.07:0,54,759	0/0:24,0:24:63.19:0,63,881	0/0:31,0:31:84.27:0,84,1205	1/1:6,17:23:45.15:926,45,0	1/1:7,23:31:62.86:1295,63,0	1/1:6,27:33:56.71:1172,57,0	0/0:29,0:29:84.27:0,84,1190	0/0:34,0:34:60.19:0,60,840	0/0:35,0:35:87.26:0,87,1225	0/0:2,0:2:6:0,6,67
chr10	51526872	.	A	AG	11085.48	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-17.846;DP=723;FS=20.909;HRun=5;HaplotypeScore=69.0335;InbreedingCoeff=0.9998;MQ=87.39;MQ0=0;MQRankSum=-3.400;QD=33.19;ReadPosRankSum=4.956;VQSLOD=3.0149;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,46:46:99:1618,123,0	1/1:1,11:12:30.10:393,30,0	0/0:32,0:32:66.71:0,67,753	0/0:27,0:28:73.98:0,74,766	0/0:21,0:21:54.13:0,54,580	1/1:4,31:35:78.25:1026,78,0	1/1:3,21:24:57.19:749,57,0	0/0:38,0:38:87.19:0,87,926	0/0:26,0:26:78.18:0,78,830	0/0:23,0:23:63.16:0,63,677	0/0:20,0:20:54.09:0,54,562	1/1:1,23:24:57.19:750,57,0	1/1:4,13:18:33.11:433,33,0	0/0:18,0:18:51.13:0,51,548	1/1:1,32:33:87.28:1145,87,0	1/1:0,29:29:81.26:1066,81,0	0/0:37,0:37:99:0,105,1127	1/1:0,19:19:54.18:711,54,0	0/0:18,0:18:42.10:0,42,451	0/0:18,0:18:45.10:0,45,476	0/0:31,0:31:84.21:0,84,902	1/1:2,24:26:69.22:908,69,0	1/1:1,26:27:75.24:984,75,0	1/1:4,37:41:99:1303,99,0	0/0:12,0:12:36.09:0,36,387	0/0:36,0:36:96.24:0,96,1032	0/0:19,0:19:54.11:0,54,572	0/0:12,0:12:33.08:0,33,355
chr10	51528355	.	ACT	A	2804.02	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=10.136;DP=680;FS=12.272;HRun=0;HaplotypeScore=79.9708;InbreedingCoeff=0.9929;MQ=92.55;MQ0=2;MQRankSum=-5.976;QD=31.51;ReadPosRankSum=0.770;VQSLOD=5.2592;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,46:46:99:1463,108,0	0/0:9,0:9:21.05:0,21,343	0/0:27,0:27:75.17:0,75,1208	0/0:30,0:30:75.21:0,75,1187	0/0:23,0:23:69.24:0,69,1219	1/1:0,19:19:57.19:783,57,0	1/1:1,21:22:51.17:701,51,0	0/0:31,0:31:84.28:0,84,1435	0/0:21,0:21:57.20:0,57,1012	0/0:24,0:24:60.19:0,60,1029	0/0:21,0:21:60.19:0,60,1028	0/0:18,0:18:51.17:0,51,901	0/0:27,0:27:72.23:0,72,1249	0/0:28,0:28:81.28:0,81,1428	0/0:39,0:39:99:0,117,2039	0/0:17,0:17:45.15:0,45,799	0/0:33,0:33:96.30:0,96,1664	0/0:17,0:17:48.16:0,48,852	0/0:26,0:26:72.22:0,72,1221	0/0:28,0:28:75.23:0,75,1266	0/0:28,0:28:84.22:0,84,1400	0/0:22,0:22:66.23:0,66,1170	0/0:15,0:15:42.14:0,42,732	0/0:24,0:24:69.21:0,69,1185	0/0:29,0:29:81.06:0,81,1375	0/0:21,0:21:60.21:0,60,1065	0/0:28,0:28:81.26:0,81,1408	0/0:5,0:5:15.05:0,15,266
chr10	51528670	.	TA	T	10343.76	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=17.047;DP=741;FS=1.562;HRun=2;HaplotypeScore=79.8369;InbreedingCoeff=0.9740;MQ=77.92;MQ0=3;MQRankSum=-1.876;QD=34.59;ReadPosRankSum=3.040;VQSLOD=5.3723;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,29:28:72.23:935,72,0	1/1:0,9:9:24.08:312,24,0	0/0:26,0:26:50.04:0,50,849	0/0:9,0:10:2.64:0,3,286	0/0:34,0:34:99:0,99,1441	1/1:4,21:25:57.17:722,57,0	1/1:7,19:25:63.17:783,63,0	0/0:40,0:40:99:0,117,1708	0/0:25,0:25:75.25:0,75,1119	0/0:29,0:29:87.26:0,87,1232	0/0:27,0:27:81.27:0,81,1214	1/1:2,27:28:72.23:934,72,0	1/1:0,23:23:69.22:895,69,0	0/0:29,0:29:87.29:0,87,1299	1/1:2,24:26:66.21:857,66,0	1/1:1,30:31:87.28:1128,87,0	0/0:38,0:38:99:0,114,1684	1/1:0,26:26:75.24:973,75,0	0/0:31,0:31:93.31:0,93,1390	0/0:25,0:25:72.24:0,72,1079	0/0:38,0:38:99:0,111,1649	1/1:0,20:20:57.19:740,57,0	1/1:0,36:36:99:1402,108,0	1/1:1,18:18:51.17:662,51,0	0/0:20,0:20:60.19:0,60,876	0/0:32,0:32:96.31:0,96,1397	0/0:27,0:26:81.27:0,81,1193	0/0:11,0:11:33.11:0,33,490
chr10	51528681	.	CT	C	1427.13	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.848;DP=729;FS=2.932;HRun=1;HaplotypeScore=107.5027;InbreedingCoeff=0.9976;MQ=81.22;MQ0=0;MQRankSum=-8.684;QD=31.02;ReadPosRankSum=-1.421;VQSLOD=3.0879;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:78.27:0,78,1245	0/0:7,0:7:21.07:0,21,335	0/0:27,0:27:79.09:0,79,1188	0/0:14,0:14:42.14:0,42,672	0/0:30,0:30:90.29:0,90,1413	1/1:0,23:23:57.15:773,57,0	1/1:1,22:23:57.18:775,57,0	0/0:39,0:39:99:0,117,1870	0/0:24,0:24:72.22:0,72,1102	0/0:29,0:28:84.28:0,84,1308	0/0:30,0:30:90.28:0,90,1389	0/0:26,0:26:69.21:0,69,1057	0/0:23,0:23:69.24:0,69,1095	0/0:32,0:32:96.33:0,96,1533	0/0:26,0:26:78.27:0,78,1247	0/0:28,0:28:84.27:0,84,1317	0/0:39,0:39:99:0,117,1821	0/0:28,0:28:84.29:0,84,1342	0/0:29,0:29:87.28:0,87,1348	0/0:23,0:23:69.22:0,69,1080	0/0:36,0:36:99:0,108,1723	0/0:20,0:20:57.19:0,57,910	0/0:37,0:37:99:0,111,1775	0/0:21,0:21:60.20:0,60,950	0/0:25,0:25:75.23:0,75,1172	0/0:30,0:30:90.30:0,90,1418	0/0:23,0:21:66.20:0,66,1027	0/0:10,0:10:30.09:0,30,456
chr10	51531424	.	G	GACAC	1463.15	PASS	AB=0.863;AC=22;AF=0.440;AN=50;BaseQRankSum=2.177;DP=580;FS=7.745;HRun=0;HaplotypeScore=132.8529;InbreedingCoeff=0.6839;MQ=57.83;MQ0=13;MQRankSum=-2.783;QD=5.76;ReadPosRankSum=-2.593;VQSLOD=1.0578;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:45:5.33:0,5,199	1/1:6,0:6:2.99:24,3,0	./.	./.	0/0:15,0:17:20.79:0,21,250	1/1:12,4:21:8.74:145,9,0	1/1:22,8:30:8.47:210,8,0	1/1:14,0:14:2.22:7,2,0	0/0:23,0:24:11.54:0,12,266	0/0:18,0:17:18.06:0,18,259	0/0:13,0:14:18.03:0,18,222	0/1:28,1:29:27.74:218,0,28	1/1:21,1:22:29:392,29,0	0/0:13,0:15:15.04:0,15,211	1/1:17,1:18:5.65:122,6,0	1/1:22,0:21:6.02:108,6,0	0/0:19,0:23:20.38:0,20,334	1/1:16,0:16:8.70:151,9,0	./.	0/0:18,0:18:12.03:0,12,150	0/0:35,0:36:5.82:0,6,367	1/1:25,1:25:8.97:97,9,0	0/1:13,6:19:0:0,0,0	1/1:30,0:30:8.40:165,8,0	0/0:18,0:17:14.63:0,15,176	0/0:20,0:19:11.23:0,11,130	0/0:15,0:19:15.04:0,15,209	0/0:15,0:15:12.03:0,12,149
chr10	51531469	.	A	ACACACACC	1269.96	PASS	AB=0.914;AC=15;AF=0.268;AN=56;BaseQRankSum=9.002;DP=651;FS=7.094;HRun=0;HaplotypeScore=175.2401;InbreedingCoeff=0.5039;MQ=57.59;MQ0=32;MQRankSum=-2.829;QD=6.32;ReadPosRankSum=-2.693;VQSLOD=1.6427;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:74.90:0,75,909	1/1:4,0:4:5.98:47,6,0	0/0:21,0:8:23.95:0,24,222	0/0:19,0:10:22.95:0,23,236	0/0:23,0:22:48.61:0,49,656	0/1:25,0:24:17.33:17,0,226	0/0:34,0:33:15.40:0,15,323	0/0:28,0:27:66.20:0,66,544	0/0:36,0:36:98.29:0,98,1030	0/0:25,0:22:59.45:0,59,724	0/0:18,0:17:43.82:0,44,568	0/1:28,0:26:28.58:271,0,29	1/1:23,0:23:18.40:252,18,0	0/0:28,0:27:67.24:0,67,741	0/1:7,11:21:6.95:165,0,7	1/1:15,0:15:3.70:193,4,0	0/0:29,0:31:85.76:0,86,1012	0/1:18,0:18:8.76:145,0,9	0/0:16,0:14:32.79:0,33,260	0/0:18,0:18:41:0,41,440	0/0:38,0:34:65.99:0,66,995	1/1:22,0:21:7.76:87,8,0	1/1:13,0:13:14.38:108,14,0	0/1:29,0:30:12.11:158,0,12	0/0:20,0:18:45.56:0,46,516	0/0:20,0:20:51.76:0,52,453	0/0:23,0:22:47.24:0,47,587	0/0:10,0:9:23.89:0,24,321
chr10	51531470	.	C	CACA	529.69	PASS	AB=0.949;AC=11;AF=0.196;AN=56;BaseQRankSum=7.269;DP=646;FS=42.906;HRun=0;HaplotypeScore=124.3061;InbreedingCoeff=-0.0096;MQ=57.76;MQ0=32;MQRankSum=-1.735;QD=2.44;ReadPosRankSum=0.598;VQSLOD=0.6001;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:95.28:0,95,1253	0/1:4,0:4:17.93:18,0,19	0/0:21,0:8:24.05:0,24,285	0/0:19,0:10:30.03:0,30,320	0/0:24,0:23:51.17:0,51,726	0/1:24,0:23:24.11:24,0,439	0/1:34,0:33:27.94:28,0,541	0/0:29,0:28:77.90:0,78,915	0/0:36,0:36:97.73:0,98,1324	0/0:25,0:22:60.16:0,60,833	0/0:18,0:17:45.10:0,45,605	0/1:26,1:26:36.86:116,0,37	0/1:19,1:22:21.83:155,0,22	0/0:28,0:27:69.68:0,70,936	0/1:19,0:20:14.45:59,0,14	0/1:14,0:15:17.14:17,0,87	0/0:31,0:31:50.81:0,51,1071	0/1:14,2:16:13.51:91,0,14	0/0:16,0:14:39.01:0,39,461	0/0:18,0:18:45.60:0,46,600	0/0:37,0:33:67.99:0,68,1060	0/1:23,0:21:18.51:26,0,19	0/0:12,0:12:11.65:0,12,84	1/1:27,2:30:12.30:148,12,0	0/0:21,0:19:48.20:0,48,612	0/0:19,0:19:54.13:0,54,684	0/0:23,0:22:53.79:0,54,740	0/0:10,0:9:24.08:0,24,333
chr10	51531472	.	C	CCA	1178.88	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=8.144;DP=652;FS=4.559;HRun=0;HaplotypeScore=116.1747;InbreedingCoeff=0.9137;MQ=60.43;MQ0=30;MQRankSum=-3.180;QD=6.66;ReadPosRankSum=-0.076;VQSLOD=3.2317;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:62.58:0,63,1026	1/1:2,2:4:3.01:43,3,0	0/0:23,0:10:24.03:0,24,273	0/0:20,0:11:32.01:0,32,340	0/0:24,0:23:54.04:0,54,618	0/0:24,0:23:38.96:0,39,432	0/0:32,0:31:56.49:0,56,665	0/0:29,0:28:63.12:0,63,755	0/0:36,0:36:79.33:0,79,1041	0/0:22,0:19:39.12:0,39,498	0/0:17,0:17:39.04:0,39,455	1/1:12,18:29:15:220,15,0	1/1:7,14:24:15.05:231,15,0	0/0:28,0:27:68.89:0,69,877	1/1:18,1:20:5.51:58,6,0	1/1:6,10:17:17.99:218,18,0	0/0:32,0:32:68.39:0,68,804	1/1:14,0:16:8.86:145,9,0	0/0:15,0:14:27.08:0,27,332	0/0:20,0:20:35.90:0,36,426	0/0:38,0:34:68.11:0,68,790	1/1:7,14:20:9.03:123,9,0	1/1:11,1:12:17.97:233,18,0	1/1:8,20:30:8.52:105,9,0	0/0:21,0:19:30.09:0,30,381	0/0:18,0:18:42.13:0,42,520	0/0:23,0:22:45.12:0,45,538	0/0:10,0:9:17.08:0,17,194
chr10	51531474	.	A	ACA	1178.55	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=8.168;DP=648;FS=4.559;HRun=0;HaplotypeScore=115.0039;InbreedingCoeff=0.9137;MQ=61.36;MQ0=30;MQRankSum=-3.646;QD=6.81;ReadPosRankSum=-0.832;VQSLOD=3.1636;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:62.58:0,63,1026	1/1:2,0:3:3.01:43,3,0	0/0:24,0:11:24.03:0,24,273	0/0:20,0:11:32.01:0,32,340	0/0:24,0:23:54.04:0,54,618	0/0:24,0:23:38.96:0,39,432	0/0:32,0:31:56.49:0,56,665	0/0:28,0:27:63.12:0,63,755	0/0:35,0:35:79.38:0,79,1041	0/0:22,0:19:39.12:0,39,498	0/0:17,0:17:39.04:0,39,455	1/1:30,0:28:15:220,15,0	1/1:21,0:22:15.05:231,15,0	0/0:28,0:27:68.95:0,69,877	1/1:20,0:20:5.51:58,6,0	1/1:18,0:17:17.99:218,18,0	0/0:32,0:32:68.39:0,68,804	1/1:4,11:16:8.86:145,9,0	0/0:15,0:14:27.08:0,27,332	0/0:20,0:20:35.90:0,36,426	0/0:36,0:32:68.11:0,68,790	1/1:22,0:20:9.03:123,9,0	1/1:12,0:12:17.97:233,18,0	1/1:30,0:30:8.52:105,9,0	0/0:22,0:20:30.09:0,30,381	0/0:18,0:18:42.12:0,42,508	0/0:23,0:22:45.12:0,45,538	0/0:10,0:9:17.08:0,17,194
chr10	51531728	.	AAGAT	A	3436.83	PASS	AB=1.000;AC=21;AF=0.438;AN=48;BaseQRankSum=2.447;DP=599;FS=7.581;HRun=0;HaplotypeScore=135.8463;InbreedingCoeff=0.7684;MQ=59.08;MQ0=5;MQRankSum=0.338;QD=13.69;ReadPosRankSum=-1.065;VQSLOD=2.8387;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:5.89:0,6,47	0/0:13,0:13:3.01:0,3,47	./.	./.	1/1:12,10:20:24.08:356,24,0	0/1:23,0:23:0:0,0,0	0/0:16,0:16:8.97:0,9,70	./.	1/1:16,11:27:27.09:408,27,0	1/1:13,11:24:33.11:492,33,0	1/1:16,4:20:8.99:111,9,0	0/0:20,0:20:9.01:0,9,103	0/0:21,0:21:20.97:0,21,258	1/1:12,12:23:21.07:317,21,0	0/0:29,0:29:3:0,3,26	0/0:23,0:23:11.97:0,12,99	1/1:17,10:27:12.04:181,12,0	./.	0/0:13,0:13:12.02:0,12,232	0/0:30,0:29:36.12:0,36,825	0/0:22,0:22:27.09:0,27,622	1/1:12,0:12:1.55:4,2,0	0/0:27,0:27:3.01:0,3,46	0/0:10,0:10:3:0,3,27	1/1:10,15:24:32.98:498,33,0	1/1:8,20:27:57.15:798,57,0	0/0:30,0:30:36.11:0,36,780	1/1:14,5:19:18.06:272,18,0
chr10	51531749	.	A	AGAT	718.64	PASS	AB=0.937;AC=8;AF=0.143;AN=56;BaseQRankSum=0.967;DP=606;FS=5.398;HRun=0;HaplotypeScore=133.5786;InbreedingCoeff=-0.1781;MQ=53.89;MQ0=13;MQRankSum=1.205;QD=4.52;ReadPosRankSum=-4.231;VQSLOD=0.6266;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:24.08:0,24,367	0/1:11,0:11:70.85:71,0,81	0/0:12,0:8:8.94:0,9,133	0/0:4,0:3:3.01:0,3,46	0/0:21,0:19:51.14:0,51,653	0/1:24,0:24:92.71:93,0,334	0/1:12,0:12:98.76:99,0,248	0/0:27,0:20:54.17:0,54,780	0/0:24,0:24:63.17:0,63,815	0/0:28,0:27:81.23:0,81,1049	0/0:21,0:21:48.15:0,48,700	0/1:14,11:25:37.50:37,0,359	0/1:18,6:24:22.98:23,0,496	0/0:25,0:24:57.16:0,57,757	0/1:28,0:28:99:171,0,305	0/0:34,0:34:31.34:0,31,440	0/0:19,0:19:36.58:0,37,486	0/0:19,0:19:23.44:0,23,328	0/0:15,0:13:36.11:0,36,542	0/0:26,0:25:69.24:0,69,1104	0/0:17,0:17:48.16:0,48,769	0/0:10,11:20:18.05:0,18,254	0/1:24,0:24:99:197,0,327	0/1:11,0:11:99:164,0,159	0/0:29,0:28:69.19:0,69,875	0/0:32,0:31:93.25:0,93,1157	0/0:32,0:32:90.29:0,90,1400	0/0:14,0:14:37.04:0,37,454
chr10	51531962	.	C	CT	12715.68	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=8.120;DP=665;FS=13.860;HRun=0;HaplotypeScore=79.4304;InbreedingCoeff=0.9984;MQ=76.56;MQ0=1;MQRankSum=-3.871;QD=41.69;ReadPosRankSum=5.656;VQSLOD=3.9550;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,43:45:99:1675,105,0	1/1:0,9:9:24.08:383,24,0	0/0:21,0:21:60.05:0,60,738	0/0:20,0:20:54.10:0,54,601	0/0:21,0:21:63.21:0,63,878	1/1:0,24:24:60.20:957,60,0	1/1:0,30:30:81.21:1264,81,0	0/0:33,0:33:93.10:0,93,1154	0/0:23,0:23:63.08:0,63,806	0/0:23,0:23:69.23:0,69,949	0/0:15,0:15:39.13:0,39,543	1/1:0,28:28:72.25:1146,72,0	1/1:1,21:22:61.09:958,61,0	0/0:20,0:19:54.15:0,54,723	1/1:0,23:23:66.23:1052,66,0	1/1:1,28:29:27.39:1009,27,0	0/0:31,0:31:93.30:0,93,1279	1/1:0,25:25:72.25:1149,72,0	0/0:15,0:15:45.15:0,45,623	0/0:23,0:23:66.17:0,66,895	0/0:26,0:26:75.18:0,75,1006	1/1:0,24:24:66.22:1032,66,0	1/1:0,24:24:69.23:1089,69,0	1/1:0,22:22:63.21:1002,63,0	0/0:32,0:32:96.29:0,96,1319	0/0:29,0:29:84.18:0,84,1110	0/0:22,0:22:66.14:0,66,855	0/0:6,0:6:17.95:0,18,223
chr10	51532077	.	GGTGTGTGTGTGTGTGTGTGTGT	G	6464.22	PASS	AB=0.636;AC=17;AF=0.304;AN=56;BaseQRankSum=9.045;DP=661;FS=0.000;HRun=0;HaplotypeScore=292.1593;InbreedingCoeff=0.8796;MQ=55.13;MQ0=21;MQRankSum=-7.796;QD=34.38;ReadPosRankSum=2.143;VQSLOD=3.0802;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:42:27.03:0,27,1087	1/1:9,0:9:3.01:88,3,0	0/0:40,0:20:11.99:0,12,181	0/0:49,0:20:21.54:0,22,499	0/0:17,0:19:39.12:0,39,2237	0/0:22,0:21:27.09:0,27,1550	0/0:14,0:25:28.34:0,28,1235	0/0:29,0:28:30.10:0,30,1278	0/0:17,0:17:39.13:0,39,2555	0/0:20,0:18:51.18:0,51,3095	0/0:14,0:12:24.08:0,24,1585	1/1:6,13:20:26.97:1228,27,0	1/1:7,16:23:23.67:892,24,0	0/0:16,0:17:36.12:0,36,1753	1/1:4,19:24:24.08:1047,24,0	1/1:4,24:29:23.59:1294,24,0	0/0:33,0:34:72.18:0,72,4314	1/1:13,15:28:15.05:749,15,0	0/0:13,0:13:21.07:0,21,864	0/0:9,0:14:9.03:0,9,422	0/0:28,0:39:45.15:0,45,2406	1/1:5,15:20:18.06:729,18,0	0/1:6,8:14:2.36:162,0,2	1/1:9,12:21:6.02:276,6,0	0/0:21,0:21:36.12:0,36,2647	0/0:23,0:24:45.13:0,45,2735	0/0:17,0:17:39.13:0,39,2370	0/0:15,0:14:27.05:0,27,1206
chr10	51532679	.	GA	G	1181.77	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=2.703;DP=687;FS=8.378;HRun=8;HaplotypeScore=83.1363;InbreedingCoeff=0.9971;MQ=71.25;MQ0=0;MQRankSum=-1.844;QD=22.30;ReadPosRankSum=0.222;VQSLOD=3.8374;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,123,1456	0/0:12,0:12:36.11:0,36,435	0/0:21,0:21:25.83:0,26,308	0/0:16,0:16:21.34:0,21,269	0/0:20,0:20:51.14:0,51,605	1/1:2,28:30:78.12:753,78,0	1/1:2,21:23:57.09:550,57,0	0/0:20,0:20:54.12:0,54,618	0/0:27,0:27:75.23:0,75,906	0/0:27,0:27:72.22:0,72,863	0/0:22,0:22:60.18:0,60,723	0/0:25,0:25:63.13:0,63,742	0/0:25,0:25:66.19:0,66,786	0/0:20,0:20:45.14:0,45,544	0/0:35,2:37:50.84:0,51,1052	0/0:26,1:27:37.19:0,37,704	0/0:34,0:34:93.26:0,93,1108	0/0:22,0:22:63.19:0,63,761	0/0:22,0:22:57.16:0,57,670	0/0:19,0:19:48.15:0,48,580	0/0:18,0:18:36.10:0,36,421	0/0:23,0:23:63.14:0,63,735	0/0:29,0:29:81.22:0,81,955	0/0:31,0:31:84.22:0,84,998	0/0:24,0:24:60.17:0,60,714	0/0:31,1:32:61.30:0,61,1022	0/0:23,0:22:66.20:0,66,797	0/0:15,0:15:42.05:0,42,475
chr10	51532891	.	ACT	A	10723.83	PASS	AB=0.515;AC=23;AF=0.411;AN=56;BaseQRankSum=20.027;DP=667;FS=4.457;HRun=0;HaplotypeScore=130.7365;InbreedingCoeff=0.9296;MQ=85.62;MQ0=0;MQRankSum=-7.044;QD=42.55;ReadPosRankSum=4.404;VQSLOD=6.4504;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,38:38:93.32:1492,93,0	1/1:0,16:16:45.15:733,45,0	0/0:22,0:21:63.19:0,63,1146	0/0:28,0:28:68.94:0,69,1315	0/0:31,0:31:93.30:0,93,1850	1/1:1,28:29:78.27:1250,78,0	1/1:0,16:16:42.10:654,42,0	0/0:28,0:28:84.29:0,84,1687	0/0:26,0:26:78.27:0,78,1585	0/0:27,0:27:78.21:0,78,1585	0/0:30,0:30:90.28:0,90,1744	1/1:0,22:22:66.23:1076,66,0	1/1:0,30:30:87.30:1419,87,0	0/0:21,0:21:63.22:0,63,1266	1/1:0,21:21:54.18:870,54,0	0/1:1,16:17:12.79:686,0,13	0/0:24,0:24:69.21:0,69,1328	1/1:0,11:11:30.10:479,30,0	0/0:27,0:27:78.23:0,78,1487	0/0:40,0:40:99:0,120,2344	0/0:16,0:16:48.16:0,48,974	1/1:0,22:22:57.15:891,57,0	1/1:0,19:19:48.16:783,48,0	1/1:0,11:11:24.08:391,24,0	0/0:33,0:33:99:0,99,1989	0/0:29,0:29:87.23:0,87,1647	0/0:21,0:21:63.20:0,63,1230	0/0:12,0:12:36.12:0,36,731
chr10	51533913	.	A	ATCC	4660.16	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=18.388;DP=684;FS=13.582;HRun=0;HaplotypeScore=148.9076;InbreedingCoeff=0.9972;MQ=82.89;MQ0=0;MQRankSum=-5.110;QD=22.09;ReadPosRankSum=4.804;VQSLOD=3.7990;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:87.22:0,87,1143	1/1:11,0:12:35.60:277,36,0	0/0:27,0:27:81.27:0,81,1465	0/0:21,0:21:58.64:0,59,934	0/0:25,0:25:75.23:0,75,1331	0/0:11,0:11:14.74:0,15,207	0/0:23,0:23:54.45:0,54,749	0/0:25,0:25:72.22:0,72,1249	0/0:24,0:24:72.25:0,72,1341	0/0:16,0:16:48.15:0,48,864	0/0:13,0:13:36.11:0,36,640	1/1:26,2:28:77.21:688,77,0	1/1:21,0:21:56.73:446,57,0	0/0:28,0:28:84.26:0,84,1503	1/1:32,0:33:92.71:785,93,0	1/1:27,0:27:62.82:509,63,0	0/0:46,0:46:99:0,138,2494	1/1:23,0:23:66.36:559,66,0	0/0:13,0:13:39.13:0,39,693	0/0:29,0:29:87.27:0,87,1542	0/0:37,0:37:99:0,111,1933	1/1:20,2:23:62.96:607,63,0	1/1:13,0:13:32.87:310,33,0	1/1:31,0:31:58.86:480,59,0	0/0:23,0:23:69.24:0,69,1285	0/0:33,0:33:96.32:0,96,1758	0/0:34,0:34:99:0,99,1675	0/0:10,0:10:30.10:0,30,559
chr10	51533917	.	A	ACC	7443.09	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=15.463;DP=681;FS=15.591;HRun=6;HaplotypeScore=125.1739;InbreedingCoeff=0.9741;MQ=82.99;MQ0=0;MQRankSum=-5.745;QD=26.97;ReadPosRankSum=3.613;VQSLOD=3.1778;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,32:38:75.26:1267,75,0	1/1:12,0:12:33.09:377,33,0	0/0:27,0:27:69.20:0,69,829	0/0:21,0:21:26.06:0,26,439	0/0:25,0:25:64.05:0,64,744	1/1:9,0:9:3:27,3,0	1/1:24,0:24:17.94:187,18,0	0/0:27,0:27:54.13:0,54,638	0/0:24,0:24:63.18:0,63,755	0/0:17,0:17:42.12:0,42,508	0/0:13,0:13:36.58:0,37,439	1/1:25,0:27:78.21:893,78,0	1/1:20,0:20:51.14:593,51,0	0/0:29,0:29:78.21:0,78,925	1/1:34,0:34:90.25:1026,90,0	1/1:28,0:28:60.18:721,60,0	0/0:45,0:45:99:0,120,1421	1/1:23,0:23:63.16:682,63,0	0/0:14,0:14:35.59:0,36,401	0/0:28,0:28:52.68:0,53,828	0/0:37,0:37:99:0,99,1164	1/1:21,0:23:60.17:714,60,0	1/1:13,0:13:33.10:395,33,0	1/1:25,0:25:51.44:560,51,0	0/0:24,0:24:66.19:0,66,792	0/0:32,0:32:90.24:0,90,1065	0/0:32,0:32:90.04:0,90,993	0/0:10,0:10:30.09:0,30,365
chr10	51533918	.	C	CCA	10435.57	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=18.255;DP=689;FS=8.347;HRun=0;HaplotypeScore=117.9773;InbreedingCoeff=0.8951;MQ=82.02;MQ0=0;MQRankSum=-4.593;QD=36.87;ReadPosRankSum=4.656;VQSLOD=7.0345;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:39,0:39:8.57:606,9,0	1/1:1,11:12:33.11:613,33,0	0/0:26,0:26:78.19:0,78,1097	0/0:22,0:22:46.82:0,47,656	0/0:25,0:25:65.43:0,65,962	0/0:9,0:9:1.20:0,1,56	0/1:25,0:25:6.73:7,0,193	0/0:25,0:25:66.19:0,66,927	0/0:22,0:22:66.21:0,66,989	0/0:16,0:16:48.14:0,48,693	0/0:13,0:13:36.59:0,37,552	1/1:4,24:28:81.02:1474,81,0	1/1:1,20:21:54.18:975,54,0	0/0:29,0:29:84.26:0,84,1242	1/1:5,30:36:96.18:1716,96,0	1/1:3,27:30:66.22:1171,66,0	0/0:44,0:44:99:0,129,1894	1/1:3,22:25:65.97:1210,66,0	0/0:14,0:14:39.99:0,40,556	0/0:26,0:26:63.13:0,63,1084	0/0:37,0:37:99:0,105,1552	1/1:4,18:24:60.20:1090,60,0	1/1:4,12:16:33.11:599,33,0	1/1:2,25:27:54.48:975,54,0	0/0:24,0:24:66.22:0,66,1009	0/0:33,0:33:95.68:0,96,1409	0/0:31,0:31:93.29:0,93,1372	0/0:10,0:10:30.10:0,30,459
chr10	51536237	.	CT	C	11448.02	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=17.643;DP=749;FS=0.865;HRun=2;HaplotypeScore=89.4977;InbreedingCoeff=0.9986;MQ=82.94;MQ0=0;MQRankSum=-0.896;QD=36.46;ReadPosRankSum=4.905;VQSLOD=5.1408;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,35:35:99:1361,105,0	1/1:0,10:10:27.09:351,27,0	0/0:20,0:20:59.68:0,60,814	0/0:21,0:21:56.97:0,57,715	0/0:38,0:38:99:0,111,1639	1/1:0,28:28:84.27:1091,84,0	1/1:0,28:28:81.26:1051,81,0	0/0:36,0:36:99:0,99,1445	0/0:19,1:20:18.24:0,18,771	0/0:31,0:31:84.26:0,84,1232	0/0:19,0:19:54.17:0,54,784	1/1:1,34:35:96.31:1246,96,0	1/1:1,20:21:54.18:701,54,0	0/0:37,0:37:99:0,105,1554	1/1:1,35:36:90.29:1168,90,0	1/1:0,29:29:84.27:1089,84,0	0/0:20,0:20:57.18:0,57,834	1/1:1,10:11:27.09:350,27,0	0/0:26,0:26:78.26:0,78,1160	0/0:29,0:29:87.29:0,87,1303	0/0:26,0:26:75.24:0,75,1103	1/1:1,28:29:84.27:1091,84,0	1/1:0,27:27:78.25:1013,78,0	1/1:0,25:25:72.23:935,72,0	0/0:23,0:23:69.23:0,69,1034	0/0:34,0:34:96.30:0,96,1372	0/0:36,0:36:99:0,108,1619	0/0:19,0:19:57.18:0,57,835
chr10	51537410	.	AT	A	341.25	PASS	AB=0.888;AC=8;AF=0.143;AN=56;BaseQRankSum=9.037;DP=555;FS=0.000;HRun=12;HaplotypeScore=83.5167;InbreedingCoeff=0.6871;MQ=72.40;MQ0=2;MQRankSum=1.362;QD=2.71;ReadPosRankSum=2.380;VQSLOD=-0.4962;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:42,0:42:47.87:228,48,0	0/0:6,0:6:8.99:0,9,43	0/0:24,0:15:6.19:0,6,83	0/0:15,0:11:9.35:0,9,69	0/0:20,0:20:53.85:0,54,505	1/1:20,0:20:32.75:131,33,0	1/1:18,0:18:27.65:109,28,0	0/0:31,1:32:33.23:0,33,498	0/0:18,2:20:27.82:0,28,443	0/0:29,1:30:57.40:0,57,738	0/1:18,2:20:0.55:1,0,328	0/0:11,0:11:20.09:0,20,105	0/0:15,0:16:34.52:0,35,194	0/0:21,1:22:39.47:0,39,537	0/0:13,0:13:20.05:0,20,104	0/0:18,0:18:34.22:0,34,172	0/0:22,0:24:47.55:0,48,589	0/0:21,0:21:39.80:0,40,196	0/0:25,0:25:63.09:0,63,620	0/0:15,0:15:36.03:0,36,354	0/0:19,0:19:51.06:0,51,497	0/0:18,0:18:38.24:0,38,201	0/0:17,0:17:34.08:0,34,167	0/0:7,0:7:5.68:0,6,28	0/0:18,3:22:24.68:0,25,411	0/1:22,4:26:19.31:19,0,477	0/0:24,2:25:48.84:0,49,645	0/0:8,0:8:18.04:0,18,182
chr10	51537421	.	T	TAAA	2918.50	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=8.366;DP=546;FS=0.453;HRun=0;HaplotypeScore=95.3741;InbreedingCoeff=0.5785;MQ=66.34;MQ0=2;MQRankSum=-2.164;QD=23.92;ReadPosRankSum=2.875;VQSLOD=3.1151;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,32:38:52.61:1330,53,0	0/1:6,0:6:2.33:2,0,9	0/0:21,0:9:8.79:0,9,151	0/0:11,0:6:8.81:0,9,102	0/0:23,0:23:63.21:0,63,1106	1/1:1,21:23:50.68:944,51,0	1/1:3,14:19:38.02:762,38,0	0/0:29,0:29:74.60:0,75,1263	0/0:21,0:21:60.18:0,60,1021	0/0:29,0:29:83.92:0,84,1404	0/0:20,0:20:57.16:0,57,883	0/0:14,0:14:6.79:0,7,62	0/0:16,0:16:7.58:0,8,134	0/0:22,0:22:66.21:0,66,1118	0/0:14,0:14:19.01:0,19,93	0/0:16,0:16:21.25:0,21,142	0/0:24,0:24:68.60:0,69,1206	0/0:19,0:19:26.28:0,26,146	0/0:24,0:24:72.24:0,72,1286	0/0:15,0:15:42.06:0,42,705	0/0:22,0:22:63.19:0,63,1084	0/1:19,0:19:11.75:12,0,93	0/1:17,0:17:21.20:21,0,23	0/0:4,0:4:5.59:0,6,26	0/0:19,0:19:51.15:0,51,876	0/0:27,0:27:80.07:0,80,1332	0/0:28,0:27:81.23:0,81,1380	0/0:6,0:6:18.06:0,18,335
chr10	51537422	.	T	TTAA	6669.87	PASS	AB=0.976;AC=26;AF=0.464;AN=56;BaseQRankSum=0.595;DP=543;FS=4.414;HRun=0;HaplotypeScore=82.4429;InbreedingCoeff=0.8290;MQ=65.34;MQ0=2;MQRankSum=-2.349;QD=28.26;ReadPosRankSum=4.176;VQSLOD=4.9631;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:37,0:37:56.36:790,56,0	1/1:0,5:6:12.04:227,12,0	0/1:19,0:8:25.81:26,0,43	0/1:11,0:6:18.10:18,0,80	0/0:23,0:23:62.17:0,62,820	1/1:22,0:22:45.82:559,46,0	1/1:17,0:18:25.32:440,25,0	0/0:31,0:31:81.16:0,81,1087	0/0:20,0:20:56.48:0,56,734	0/0:28,0:28:80.90:0,81,1165	0/0:20,0:20:56.98:0,57,705	1/1:1,12:15:20.95:382,21,0	1/1:3,12:15:9.48:567,9,0	0/0:22,0:22:62.79:0,63,827	1/1:1,13:15:21.06:404,21,0	1/1:0,14:16:36.11:733,36,0	0/0:24,0:24:67.24:0,67,944	1/1:0,17:19:42.14:871,42,0	0/0:24,0:24:72.03:0,72,1002	0/0:15,0:15:42.01:0,42,589	0/0:22,0:22:66.08:0,66,879	1/1:3,17:21:41.97:748,42,0	1/1:0,16:17:36.11:772,36,0	1/1:1,3:4:6.02:132,6,0	0/0:19,0:19:50.34:0,50,700	0/0:27,0:27:80.81:0,81,1096	0/0:26,0:25:75.10:0,75,1027	0/0:6,0:6:18.06:0,18,280
chr10	51537639	.	CGA	C	630.23	PASS	AB=0.847;AC=26;AF=0.542;AN=48;BaseQRankSum=-0.753;DP=467;FS=40.072;HRun=0;HaplotypeScore=72.4664;InbreedingCoeff=0.3192;MQ=70.32;MQ0=16;MQRankSum=1.126;QD=2.46;ReadPosRankSum=0.365;VQSLOD=0.1138;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:25:0.01:0,0,0	1/1:9,0:8:2.37:11,2,0	./.	0/0:24,0:13:0.47:0,0,1	1/1:17,0:17:2.04:6,2,0	0/0:19,0:19:11.98:0,12,132	0/0:23,0:19:9.02:0,9,95	1/1:22,0:20:5.50:42,6,0	0/1:13,3:16:9.94:97,0,10	1/1:12,0:13:2.84:14,3,0	1/1:17,0:17:10.81:65,11,0	0/0:16,0:16:0.44:0,0,1	0/0:10,0:10:3.01:0,3,37	0/1:7,6:13:10.82:87,0,11	./.	0/0:17,0:15:3.25:0,3,29	1/1:19,4:22:2.90:91,3,0	0/0:11,0:11:3.87:0,4,25	1/1:14,0:15:6.22:56,6,0	1/1:17,1:18:3.01:33,3,0	1/1:11,0:10:3.01:33,3,0	0/0:13,0:11:8.80:0,9,75	0/0:16,0:14:5.29:0,5,23	./.	1/1:8,4:12:5.84:47,6,0	1/1:14,5:20:10.25:108,10,0	0/1:16,3:18:37.46:82,0,37	./.
chr10	51537726	.	G	GAGAA	2339.24	PASS	AB=0.969;AC=16;AF=0.286;AN=56;BaseQRankSum=8.515;DP=450;FS=14.444;HRun=0;HaplotypeScore=118.8021;InbreedingCoeff=0.1529;MQ=32.71;MQ0=34;MQRankSum=-4.352;QD=10.35;ReadPosRankSum=-1.870;VQSLOD=1.5349;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:31,0:25:31.84:451,32,0	0/1:6,0:6:20.84:110,0,21	0/0:20,0:3:8.98:0,9,115	0/0:37,0:7:8.78:0,9,121	0/0:9,0:9:20.94:0,21,334	1/1:28,1:22:5.50:417,5,0	1/1:24,1:16:19.38:229,19,0	0/0:28,0:21:49.57:0,50,643	0/0:5,0:5:9.03:0,9,125	0/0:13,0:13:33.10:0,33,547	0/0:12,0:9:6.22:0,6,82	0/1:22,1:20:42.35:320,0,42	0/1:12,0:9:71.41:84,0,71	0/0:13,0:13:5.52:0,6,106	0/1:23,1:21:50.01:360,0,50	0/1:15,0:13:47.47:164,0,47	0/0:9,0:7:8.98:0,9,108	0/1:8,0:7:33.02:33,0,126	0/0:12,0:12:26.99:0,27,315	0/0:3,0:3:8.74:0,9,56	0/0:21,0:18:20.77:0,21,360	0/1:14,1:14:63.31:76,0,63	0/1:22,0:19:69.94:258,0,70	1/1:15,0:12:0.47:1,0,0	0/0:9,0:8:14.40:0,14,204	0/0:10,0:10:26.95:0,27,365	0/0:9,0:7:11.21:0,11,180	0/0:14,0:12:23.76:0,24,299
chr10	51539918	.	T	TTTG	4608.42	PASS	AB=1.000;AC=14;AF=0.250;AN=56;BaseQRankSum=13.609;DP=633;FS=0.000;HRun=0;HaplotypeScore=97.5721;InbreedingCoeff=0.0439;MQ=62.79;MQ0=4;MQRankSum=1.731;QD=19.20;ReadPosRankSum=1.778;VQSLOD=4.3924;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:29:99:350,0,166	0/1:14,0:14:85.68:214,0,86	0/0:27,0:18:38.80:0,39,523	0/0:19,0:12:21.37:0,21,254	0/0:37,0:37:99:0,102,1470	1/1:4,31:36:66.23:1383,66,0	1/1:3,16:19:33.11:685,33,0	0/0:27,0:27:60.19:0,60,822	0/0:18,0:18:45.15:0,45,652	0/0:22,0:22:66.20:0,66,934	0/0:27,0:27:72.24:0,72,1061	0/1:18,0:18:40.09:306,0,40	0/1:17,0:17:43.72:152,0,44	0/0:17,0:17:48.16:0,48,706	0/1:21,0:20:99:312,0,189	0/1:24,0:24:47.87:438,0,48	0/0:30,0:30:84.24:0,84,1187	0/1:22,0:22:34.66:335,0,35	0/0:25,0:23:54.15:0,54,734	0/0:24,0:24:60.20:0,60,870	0/0:6,0:6:12.03:0,12,159	0/1:12,0:12:55.37:140,0,55	0/1:16,0:16:99:172,0,129	0/1:12,0:12:99:122,0,99	0/0:35,0:35:90.28:0,90,1302	0/0:37,0:37:99:0,101,1431	0/0:33,0:32:81.26:0,81,1167	0/0:9,0:9:21.07:0,21,306
chr10	51539924	.	G	GTTGT	8255.03	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=-6.336;DP=658;FS=0.390;HRun=0;HaplotypeScore=99.2998;InbreedingCoeff=0.9022;MQ=60.67;MQ0=9;MQRankSum=1.040;QD=32.25;ReadPosRankSum=2.049;VQSLOD=4.5899;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,22:32:42.14:1015,42,0	1/1:2,11:13:27.09:642,27,0	0/0:25,0:16:15.02:0,15,209	0/0:20,0:8:6.02:0,6,93	0/0:39,0:39:87.27:0,87,1323	1/1:34,0:34:32.76:529,33,0	0/1:20,0:20:54.83:233,0,55	0/0:28,0:28:42.14:0,42,603	0/0:18,0:18:36.09:0,36,543	0/0:26,0:26:63.21:0,63,982	0/0:25,0:25:60.20:0,60,964	1/1:4,17:22:35.95:866,36,0	1/1:3,9:15:18.06:435,18,0	0/0:20,0:20:48.13:0,48,693	1/1:6,16:22:39.13:931,39,0	1/1:4,18:25:51.18:1232,51,0	0/0:33,0:33:72.24:0,72,1128	1/1:6,17:24:42.14:984,42,0	0/0:23,0:20:33.11:0,33,510	0/0:25,0:25:54.14:0,54,820	0/0:7,0:7:15.05:0,15,230	1/1:3,7:14:21.54:480,22,0	1/1:5,11:17:24.55:545,25,0	1/1:4,12:17:15.05:362,15,0	0/0:34,0:34:75.25:0,75,1200	0/0:38,0:39:77.62:0,78,1322	0/0:29,0:29:78.26:0,78,1248	0/0:11,0:11:21.07:0,21,314
chr10	51541031	.	C	CA	1473.08	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-8.100;DP=775;FS=1.842;HRun=7;HaplotypeScore=68.4355;InbreedingCoeff=0.9966;MQ=80.12;MQ0=0;MQRankSum=-1.036;QD=23.38;ReadPosRankSum=-0.501;VQSLOD=3.5504;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:93.14:0,93,898	0/0:9,0:9:27.04:0,27,261	0/0:22,0:22:45.05:0,45,428	0/0:18,0:18:24.37:0,24,346	0/0:35,0:35:99:0,99,956	1/1:5,27:32:57.17:689,57,0	1/1:3,28:31:75.23:906,75,0	0/0:35,0:35:75.08:0,75,716	0/0:22,0:22:66.09:0,66,631	0/0:28,0:28:81.13:0,81,782	0/0:23,0:23:60.09:0,60,579	0/0:34,0:34:93.15:0,93,898	0/0:23,0:23:57.05:0,57,542	0/0:25,0:25:75.12:0,75,724	0/0:39,0:39:99:0,111,1058	0/0:35,0:35:99:0,99,951	0/0:35,0:35:87.13:0,87,840	0/0:23,0:23:29.56:0,30,546	0/0:8,0:8:24.02:0,24,223	0/0:26,0:26:75.11:0,75,719	0/0:33,0:33:87.10:0,87,840	0/0:32,0:32:87.14:0,87,840	0/0:37,0:37:69.05:0,69,943	0/0:29,1:30:50.90:0,51,774	0/0:23,0:23:57.07:0,57,545	0/0:39,0:39:99:0,114,1101	0/0:36,0:36:99:0,99,948	0/0:9,0:9:27.04:0,27,261
chr10	51542510	.	ATGTG	A	974.32	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.784;DP=1011;FS=4.289;HRun=0;HaplotypeScore=161.5638;InbreedingCoeff=0.9998;MQ=61.47;MQ0=3;MQRankSum=-0.762;QD=32.48;ReadPosRankSum=1.874;VQSLOD=3.7919;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:46:99:0,117,2818	0/0:14,0:14:36.12:0,36,887	0/0:38,0:28:53.87:0,54,1177	0/0:36,0:23:54.14:0,54,1235	0/0:33,0:34:93.32:0,93,2322	0/0:19,0:19:42.14:0,42,1041	0/0:31,0:32:87.09:0,87,2078	0/0:28,0:28:63.22:0,63,1576	0/0:43,0:43:99:0,117,2773	0/0:32,0:32:87.30:0,87,2129	0/0:24,0:24:63.22:0,63,1578	0/0:47,0:47:99:0,123,2995	0/0:31,0:34:98.61:0,99,2197	0/0:45,0:47:99:0,129,2898	0/0:40,0:40:99:0,99,2469	0/0:32,0:33:90.10:0,90,2198	0/0:39,0:39:99:0,102,2513	1/1:3,27:30:62.75:1069,63,0	0/0:36,0:33:81.23:0,81,1870	0/0:24,0:24:54.19:0,54,1361	0/0:103,0:103:99:0,271,6684	0/0:34,0:34:93.32:0,93,2347	0/0:21,0:21:63.22:0,63,1584	0/0:43,0:43:99:0,120,3032	0/0:26,0:26:75.26:0,75,1868	0/0:38,0:38:99:0,99,2426	0/0:30,0:29:81.28:0,81,1968	0/0:37,0:37:90.27:0,90,2142
chr10	51542766	.	A	AGCCAT	5073.54	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.053;DP=856;FS=1.080;HRun=0;HaplotypeScore=157.2136;InbreedingCoeff=1.0000;MQ=82.11;MQ0=0;MQRankSum=-12.371;QD=76.87;ReadPosRankSum=0.032;VQSLOD=6.3106;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,114,2311	0/0:16,0:16:48.16:0,48,1017	0/0:26,0:26:75.23:0,75,1444	0/0:22,0:22:60.09:0,60,1119	0/0:32,0:32:96.33:0,96,2044	1/1:4,25:29:78.27:2425,78,0	1/1:14,20:37:87.30:2649,87,0	0/0:32,0:32:69.45:0,69,1734	0/0:38,0:38:99:0,111,2279	0/0:36,0:36:99:0,105,2153	0/0:13,0:13:39.13:0,39,831	0/0:31,0:31:87.30:0,87,1823	0/0:32,0:32:93.32:0,93,1954	0/0:32,0:32:93.30:0,93,1926	0/0:42,0:42:99:0,123,2539	0/0:35,0:35:99:0,99,2071	0/0:36,0:36:99:0,108,2286	0/0:21,0:21:60.18:0,60,1210	0/0:27,0:27:81.24:0,81,1606	0/0:21,0:21:57.18:0,57,1164	0/0:42,0:42:99:0,120,2530	0/0:27,0:27:81.24:0,81,1627	0/0:22,0:22:63.21:0,63,1300	0/0:40,0:40:99:0,111,2313	0/0:25,0:25:69.22:0,69,1364	0/0:35,0:35:99:0,102,2129	0/0:33,0:33:87.28:0,87,1791	0/0:34,0:34:99:0,99,1786
chr10	51544135	.	GTTTTT	G	2131.90	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=0.764;DP=605;FS=15.106;HRun=15;HaplotypeScore=130.6379;InbreedingCoeff=0.8374;MQ=68.50;MQ0=5;MQRankSum=-0.551;QD=16.40;ReadPosRankSum=5.644;VQSLOD=-0.6081;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,20:21:38.95:594,39,0	0/0:1,0:8:10.30:0,10,107	0/0:46,0:18:41.23:0,41,440	0/0:31,0:17:14.44:0,14,228	0/0:37,0:40:99:0,103,1917	0/0:30,0:29:67.09:0,67,1252	0/1:27,0:26:12.68:13,0,712	0/0:32,0:33:77.61:0,78,1439	0/0:15,0:16:41.81:0,42,916	0/0:29,0:31:78.16:0,78,1484	0/0:13,0:16:44.85:0,45,890	1/1:4,15:19:23.97:386,24,0	1/1:4,12:17:17.70:269,18,0	0/0:17,0:17:48.14:0,48,1116	0/0:4,0:17:12.53:0,13,69	0/0:2,0:13:24.43:0,24,116	0/0:24,0:29:67.08:0,67,1383	0/0:6,0:17:24.56:0,25,116	0/0:20,0:20:46.35:0,46,762	0/0:18,0:22:50.93:0,51,1107	0/0:10,0:12:29.11:0,29,581	1/1:2,13:15:29.92:439,30,0	1/1:3,13:17:1.27:275,1,0	1/1:2,12:14:21.05:338,21,0	0/0:21,0:23:60.19:0,60,1280	0/0:20,0:21:54.11:0,54,970	0/0:20,0:20:51.16:0,51,1220	0/0:8,0:7:21.07:0,21,478
chr10	51544143	.	T	TTTG	1264.58	PASS	AB=0.794;AC=3;AF=0.054;AN=56;BaseQRankSum=-4.615;DP=599;FS=2.236;HRun=0;HaplotypeScore=116.0883;InbreedingCoeff=-0.0601;MQ=68.49;MQ0=5;MQRankSum=-5.690;QD=18.60;ReadPosRankSum=3.008;VQSLOD=3.6476;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:30.78:0,31,320	0/0:7,0:7:21:0,21,201	0/0:52,0:22:48.41:0,48,396	0/0:34,0:16:17.71:0,18,159	0/0:42,0:42:99:0,109,1211	0/1:12,17:29:53.97:919,0,54	0/1:17,8:24:99:421,0,149	0/0:33,0:33:76.74:0,77,882	0/0:14,0:14:41.59:0,42,423	0/0:31,0:30:86.96:0,87,1004	0/0:18,0:18:50.77:0,51,592	0/0:15,0:15:23.84:0,24,209	0/0:13,0:13:8.49:0,8,117	0/0:17,0:17:47.98:0,48,558	0/0:16,0:16:26.97:0,27,256	0/0:14,0:14:30.05:0,30,294	0/0:28,0:28:69.55:0,70,834	0/0:20,0:20:38.50:0,39,341	0/0:19,0:19:56.69:0,57,575	0/0:22,0:22:56.81:0,57,678	0/0:11,0:11:29.09:0,29,352	0/1:13,0:13:24.12:24,0,177	0/0:18,0:18:18.83:0,19,212	0/0:14,0:14:23.99:0,24,209	0/0:23,0:22:56.12:0,56,696	0/0:19,0:19:55.30:0,55,615	0/0:19,0:19:52.96:0,53,699	0/0:9,0:8:23.98:0,24,300
chr10	51544151	.	G	GT	288.09	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=2.697;DP=570;FS=0.881;HRun=15;HaplotypeScore=93.6514;InbreedingCoeff=0.7916;MQ=64.93;MQ0=4;MQRankSum=-2.575;QD=3.51;ReadPosRankSum=1.149;VQSLOD=0.9283;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:53.43:0,53,445	0/0:7,0:7:18.01:0,18,163	0/0:39,0:14:19.31:0,19,182	0/1:28,0:14:1.70:2,0,34	0/0:36,0:36:70.47:0,70,595	1/1:28,0:29:23.99:232,24,0	1/1:16,8:23:20.79:175,21,0	0/0:29,0:29:53.36:0,53,479	0/0:13,0:13:8.37:0,8,77	0/0:29,0:28:10.29:0,10,345	0/0:18,0:18:32.65:0,33,272	0/0:15,0:15:24:0,24,209	0/0:15,0:15:20.42:0,20,155	0/0:20,0:20:26.56:0,27,246	0/0:17,0:17:32.92:0,33,278	0/0:15,0:15:35.98:0,36,318	0/0:29,0:29:50.61:0,51,450	0/0:19,0:19:38.64:0,39,317	0/0:15,0:15:26.91:0,27,241	0/0:21,0:21:47.91:0,48,414	0/0:11,0:11:24:0,24,219	0/0:13,0:13:32.96:0,33,280	0/0:19,0:19:35.14:0,35,287	0/0:16,0:16:32.94:0,33,276	0/0:20,0:20:41.87:0,42,371	0/0:17,0:17:14.66:0,15,231	0/0:20,0:20:19.09:0,19,271	0/0:9,0:8:18.01:0,18,164
chr10	51549051	.	GAT	G	158.24	PASS	AB=0.859;AC=7;AF=0.206;AN=34;BaseQRankSum=4.552;DP=232;FS=2.581;HRun=0;HaplotypeScore=30.6236;InbreedingCoeff=-0.0249;MQ=84.06;MQ0=1;MQRankSum=-1.221;QD=1.58;ReadPosRankSum=0.147;VQSLOD=1.2157;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:5:3:0,3,25	./.	1/1:10,0:9:1.71:6,2,0	0/0:9,0:5:0.47:0,0,1	0/0:7,0:8:18.01:0,18,216	./.	./.	0/1:30,5:36:99:136,0,563	0/0:11,0:11:15.05:0,15,239	0/0:9,0:9:18.06:0,18,287	0/0:5,0:5:12.02:0,12,163	./.	./.	0/1:4,2:6:26.72:27,0,86	./.	./.	0/0:18,2:20:6.39:0,6,585	./.	0/1:10,1:11:20.72:21,0,176	0/0:9,0:9:9.03:0,9,143	0/0:6,0:6:18.06:0,18,286	./.	./.	./.	0/0:11,0:11:18.06:0,18,287	0/0:9,0:9:21.07:0,21,334	0/1:17,1:18:2.64:3,0,444	0/1:15,4:19:68.31:68,0,318
chr10	51549298	.	A	AGTC	2790.11	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-8.066;DP=601;FS=7.011;HRun=0;HaplotypeScore=79.8798;InbreedingCoeff=0.9904;MQ=77.67;MQ0=0;MQRankSum=-2.075;QD=56.94;ReadPosRankSum=-1.598;VQSLOD=5.2506;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,102,1699	0/0:7,0:7:18.06:0,18,300	0/0:10,0:10:30.10:0,30,495	0/0:16,0:16:48.16:0,48,744	0/0:19,0:19:54.18:0,54,900	1/1:3,23:26:69.24:1560,69,0	1/1:3,20:23:60.21:1352,60,0	0/0:27,0:27:78.27:0,78,1281	0/0:20,0:20:60.19:0,60,970	0/0:25,0:25:72.23:0,72,1162	0/0:13,0:13:39.13:0,39,650	0/0:22,0:22:63.20:0,63,1006	0/0:27,0:27:81.26:0,81,1315	0/0:24,0:24:72.23:0,72,1171	0/0:21,0:21:57.19:0,57,950	0/0:18,0:18:54.18:0,54,900	0/0:22,0:23:64.77:0,65,1054	0/0:20,0:20:54.18:0,54,874	0/0:21,0:21:57.19:0,57,930	0/0:20,0:20:60.19:0,60,965	0/0:34,0:34:96.33:0,96,1599	0/0:8,0:8:18.06:0,18,300	0/0:8,0:8:24.08:0,24,400	0/0:30,0:30:90.31:0,90,1499	0/0:15,0:15:45.15:0,45,741	0/0:30,0:30:90.31:0,90,1489	0/0:34,0:33:99:0,99,1585	0/0:22,0:22:66.19:0,66,995
chr10	51550160	.	A	ATG	961.72	PASS	AB=0.979;AC=26;AF=0.542;AN=48;BaseQRankSum=1.855;DP=358;FS=11.846;HRun=0;HaplotypeScore=80.1466;InbreedingCoeff=0.1820;MQ=20.13;MQ0=149;MQRankSum=0.624;QD=4.02;ReadPosRankSum=1.180;VQSLOD=0.8283;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:2:0.47:0,0,1	0/0:2,0:1:3:0,3,27	./.	./.	0/0:9,0:6:1.05:0,1,3	1/1:11,1:9:14.92:184,15,0	1/1:9,2:5:2.91:26,3,0	0/0:6,0:3:9.01:0,9,105	0/1:14,0:7:22.56:29,0,23	0/1:14,0:9:51.22:51,0,168	0/0:10,0:3:2.52:0,3,7	1/1:10,3:8:6.31:74,6,0	1/1:9,0:5:4.26:40,4,0	1/1:12,0:7:3.01:32,3,0	0/1:12,2:8:1.16:35,0,1	1/1:10,2:10:11.97:145,12,0	0/0:16,0:8:1.53:0,2,28	1/1:21,1:5:12.02:160,12,0	0/1:11,0:6:42.79:43,0,100	1/1:11,0:9:3.86:29,4,0	./.	0/0:11,4:13:5.13:0,5,29	0/0:16,4:13:3.70:0,4,23	1/1:38,1:13:6.11:26,6,0	1/1:19,0:12:6.12:74,6,0	0/1:17,0:11:99:118,0,167	0/1:8,0:3:0.95:35,0,1	./.
chr10	51550178	.	A	ATG	87.19	PASS	AB=0.944;AC=13;AF=0.310;AN=42;BaseQRankSum=1.784;DP=288;FS=0.000;HRun=0;HaplotypeScore=46.8021;InbreedingCoeff=0.3548;MQ=16.86;MQ0=161;MQRankSum=0.811;QD=0.96;ReadPosRankSum=-1.063;VQSLOD=1.2922;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	0/0:2,0:1:2.88:0,3,15	./.	./.	0/0:4,0:1:0:0,0,0	1/1:9,1:6:3.73:23,4,0	0/1:10,1:5:0.09:0,0,0	0/0:10,0:1:0.47:0,0,1	0/0:10,0:4:2.60:0,3,10	0/0:4,0:2:3.01:0,3,49	./.	0/0:10,0:6:0.66:0,1,3	0/0:4,0:2:0.47:0,0,1	0/0:8,0:5:2.75:0,3,35	0/1:10,1:7:3.02:14,0,3	1/1:12,0:7:2.97:21,3,0	0/0:14,0:5:4.25:0,4,36	1/1:17,1:3:6.02:88,6,0	./.	1/1:7,0:5:5.92:44,6,0	./.	0/1:12,0:8:1.33:1,0,2	0/0:13,0:9:0.72:0,1,1	0/0:28,1:10:5.46:0,5,52	1/1:10,0:5:1.83:4,2,0	0/0:9,0:4:11.93:0,12,133	0/0:7,0:1:3.01:0,3,35	./.
chr10	51550186	.	A	ATG	39.98	PASS	AB=1.000;AC=11;AF=0.324;AN=34;BaseQRankSum=-0.975;DP=239;FS=0.000;HRun=0;HaplotypeScore=43.9425;InbreedingCoeff=0.2912;MQ=16.10;MQ0=143;MQRankSum=-0.237;QD=0.56;ReadPosRankSum=0.290;VQSLOD=0.8970;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/0:2,0:1:2.50:0,2,9	./.	./.	./.	0/0:9,0:5:2.37:0,2,9	0/1:9,0:5:0.09:0,0,0	1/1:12,0:1:1.25:3,1,0	0/0:9,0:4:1.25:0,1,3	0/0:3,0:1:3.01:0,3,49	./.	0/0:9,1:5:2.50:0,2,6	1/1:3,1:2:2.98:22,3,0	0/0:7,0:5:2.68:0,3,17	0/0:10,0:7:2.28:0,2,7	0/1:11,0:7:0.01:0,0,0	0/0:9,0:3:2.03:0,2,5	0/0:10,1:3:6:0,6,55	./.	./.	./.	1/1:9,0:5:2.84:17,3,0	0/0:7,1:5:0.72:0,1,1	1/1:20,1:9:8.73:66,9,0	./.	0/1:5,0:3:13.38:29,0,13	./.	./.
chr10	51550687	.	GGAGAGA	G	926.33	PASS	AB=0.958;AC=17;AF=0.315;AN=54;BaseQRankSum=2.246;DP=326;FS=23.107;HRun=0;HaplotypeScore=76.9091;InbreedingCoeff=0.4030;MQ=57.51;MQ0=22;MQRankSum=2.100;QD=5.94;ReadPosRankSum=2.841;VQSLOD=0.1128;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:16,2:17:16.30:181,0,16	0/0:5,0:5:3.48:0,3,40	./.	0/1:64,0:22:0:0,0,0	0/0:6,0:6:6.02:0,6,88	0/1:7,0:7:18.33:19,0,18	0/1:20,0:19:31.09:124,0,31	0/0:15,0:15:15.05:0,15,313	0/0:7,0:6:3.01:0,3,55	0/0:10,0:10:18.49:0,18,489	0/0:5,0:6:15.05:0,15,343	1/1:3,1:4:5.92:62,6,0	1/1:5,1:6:14.25:220,14,0	0/0:8,0:7:15.04:0,15,287	1/1:7,0:7:2.37:8,2,0	1/1:5,0:4:2.55:10,3,0	0/0:9,0:8:19.40:0,19,374	0/0:8,0:8:12.69:0,13,124	0/0:11,0:9:12.03:0,12,201	0/0:5,0:5:9.02:0,9,154	0/0:10,0:9:11.31:0,11,320	1/1:7,0:7:5.73:53,6,0	1/1:8,1:8:18.06:292,18,0	0/1:7,1:8:27.07:118,0,27	0/0:4,0:4:6.02:0,6,85	0/0:8,0:7:15.05:0,15,475	0/0:6,0:6:12.04:0,12,258	0/0:10,0:8:15.05:0,15,427
chr10	51550705	.	A	ATG	883.67	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=2.586;DP=348;FS=0.000;HRun=0;HaplotypeScore=70.0353;InbreedingCoeff=0.6765;MQ=39.04;MQ0=24;MQRankSum=-1.384;QD=16.67;ReadPosRankSum=-1.086;VQSLOD=2.7262;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:27.76:0,28,340	1/1:1,3:4:4.77:24,5,0	0/0:25,0:1:2.84:0,3,14	0/0:41,0:6:3.81:0,4,20	0/0:7,0:7:9.03:0,9,140	1/1:6,0:6:15.05:227,15,0	1/1:17,0:17:32.56:511,33,0	0/0:18,0:16:43.69:0,44,598	0/0:9,0:8:3.01:0,3,49	0/0:11,0:11:33.09:0,33,475	0/0:8,0:8:18.06:0,18,291	0/0:9,0:9:18.06:0,18,242	0/0:10,0:10:18:0,18,187	0/0:15,0:14:24.07:0,24,361	1/1:10,0:10:9.03:105,9,0	1/1:7,2:8:8.82:85,9,0	0/0:11,0:10:20.80:0,21,325	0/1:7,0:7:92.26:92,0,101	0/0:12,0:7:21.04:0,21,283	0/0:7,0:6:11.87:0,12,151	0/0:13,0:12:18.06:0,18,273	0/0:12,0:12:11.64:0,12,175	0/0:16,0:14:17.68:0,18,217	0/0:13,0:13:14.85:0,15,186	0/0:6,0:6:6.02:0,6,95	0/0:10,0:8:19.31:0,19,328	0/0:10,0:10:20.33:0,20,275	0/0:12,0:8:18.06:0,18,281
chr10	51550711	.	A	ATG	217.50	PASS	AB=0.942;AC=7;AF=0.130;AN=54;BaseQRankSum=2.692;DP=344;FS=8.843;HRun=0;HaplotypeScore=74.5923;InbreedingCoeff=0.0556;MQ=40.23;MQ0=20;MQRankSum=0.071;QD=3.06;ReadPosRankSum=2.692;VQSLOD=0.8489;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:17,1:18:60.56:61,0,122	0/1:4,0:4:7.40:7,0,34	./.	0/0:32,0:3:3.31:0,3,15	0/0:9,0:9:12.04:0,12,182	0/0:6,0:6:12.03:0,12,128	0/0:15,0:15:25.51:0,26,225	0/0:17,0:15:42.14:0,42,608	0/0:12,0:11:9:0,9,120	0/0:10,0:10:30.10:0,30,443	0/0:9,0:9:21.07:0,21,337	0/1:9,0:9:17.85:18,0,162	0/1:8,2:10:42.58:75,0,43	0/0:15,0:14:27.05:0,27,402	0/0:13,0:13:2.57:0,3,27	0/0:10,0:9:6.76:0,7,55	0/0:12,0:11:25.63:0,26,365	0/0:8,0:8:11.77:0,12,181	0/0:10,0:6:18.03:0,18,229	0/0:7,0:6:11.92:0,12,171	0/0:14,0:13:21.06:0,21,298	0/0:13,0:13:1.72:0,2,115	1/1:17,0:15:7.94:106,8,0	0/1:12,1:13:74.70:75,0,96	0/0:7,0:7:6.02:0,6,95	0/0:11,0:9:24.08:0,24,378	0/0:12,0:12:26.38:0,26,392	0/0:13,0:9:18.06:0,18,280
chr10	51550717	.	ATG	A	1795.75	PASS	AB=0.969;AC=29;AF=0.537;AN=54;BaseQRankSum=3.760;DP=321;FS=8.126;HRun=0;HaplotypeScore=64.3070;InbreedingCoeff=0.2751;MQ=40.71;MQ0=18;MQRankSum=-0.080;QD=9.26;ReadPosRankSum=2.380;VQSLOD=1.9981;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:17,1:18:22.17:293,22,0	1/1:0,3:3:2.96:24,3,0	./.	0/0:20,0:2:2.18:0,2,18	0/0:6,1:7:9.78:0,10,108	1/1:11,0:10:12.01:183,12,0	1/1:13,1:14:11.27:222,11,0	0/0:16,1:15:0.92:0,1,414	0/0:7,5:11:1.58:0,2,54	0/1:8,0:8:25.38:25,0,217	0/1:9,0:9:0.47:0,0,203	1/1:8,0:9:9.59:131,10,0	0/1:9,1:10:6.24:165,0,6	0/0:13,0:13:5.95:0,6,237	1/1:2,11:13:2.32:35,2,0	1/1:3,7:9:8.88:109,9,0	0/1:11,0:10:93.56:95,0,94	1/1:2,4:6:15.05:201,15,0	0/1:11,0:6:26.78:27,0,69	0/1:7,0:6:6.69:7,0,87	0/0:13,2:14:17.93:0,18,301	1/1:12,2:13:5.69:126,6,0	1/1:17,0:15:20.73:258,21,0	0/1:12,2:14:11.66:55,0,12	1/1:9,0:8:2.08:7,2,0	0/0:10,0:8:23.56:0,24,323	0/0:11,0:11:7.98:0,8,232	0/0:12,0:9:3.26:0,3,171
chr10	51550719	.	GGAGA	G	173.77	PASS	AB=0.984;AC=10;AF=0.192;AN=52;BaseQRankSum=2.547;DP=327;FS=0.000;HRun=0;HaplotypeScore=80.1814;InbreedingCoeff=0.3122;MQ=41.16;MQ0=15;MQRankSum=-1.276;QD=1.91;ReadPosRankSum=1.452;VQSLOD=0.7729;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:18,0:18:2.06:2,0,37	0/0:3,0:3:2.90:0,3,16	./.	./.	0/0:6,0:7:8.77:0,9,155	0/0:11,0:10:2.44:0,2,6	0/0:14,0:14:0:0,0,1	0/0:17,0:15:14.97:0,15,168	0/0:12,0:11:11.25:0,11,174	0/0:8,0:8:6.02:0,6,143	0/0:9,0:9:12.01:0,12,193	1/1:8,1:9:14.08:183,14,0	1/1:8,4:12:3.71:15,4,0	0/0:13,0:14:11.81:0,12,257	0/0:14,0:14:3.48:0,3,47	0/1:9,0:9:0:0,0,0	0/0:12,0:11:8.77:0,9,82	0/0:6,0:6:3.31:0,3,15	0/0:12,0:7:9.07:0,9,156	0/0:6,1:6:3.01:0,3,59	0/0:14,0:14:17.80:0,18,368	1/1:9,4:13:2.39:44,2,0	0/0:13,4:15:5.27:0,5,21	0/1:14,0:14:36.61:37,0,59	0/0:10,0:9:0:0,0,0	0/0:11,0:10:20.75:0,21,276	0/0:12,0:12:17.48:0,17,491	0/1:13,0:10:15.57:16,0,264
chr10	51550755	.	ATG	A	38.07	PASS	AB=0.924;AC=10;AF=0.185;AN=54;BaseQRankSum=6.989;DP=532;FS=24.622;HRun=0;HaplotypeScore=81.7001;InbreedingCoeff=-0.1604;MQ=56.19;MQ0=16;MQRankSum=-3.499;QD=0.21;ReadPosRankSum=-3.543;VQSLOD=-0.5998;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:24:22.01:0,22,621	0/1:2,2:4:18.80:19,0,34	0/0:30,0:13:16.52:0,17,416	0/1:41,0:11:13.43:13,0,159	0/0:16,1:17:31.93:0,32,349	./.	0/0:1,23:24:2.49:0,2,6	0/0:27,0:24:61.67:0,62,1102	0/0:17,2:19:36.88:0,37,502	0/0:14,0:12:24.14:0,24,583	0/0:15,0:14:7.75:0,8,373	0/1:18,0:18:0.66:1,0,465	0/1:17,2:19:2.32:2,0,421	0/0:21,0:21:44.94:0,45,595	0/0:15,0:15:30.10:0,30,470	0/0:16,1:16:23.69:0,24,507	0/1:11,0:11:0.90:1,0,376	0/1:6,1:7:41.57:42,0,158	0/1:18,1:13:42.12:42,0,527	0/0:12,0:12:30.10:0,30,444	0/0:24,1:23:34.39:0,34,763	0/1:13,1:13:3.36:3,0,197	0/0:19,1:19:33.96:0,34,463	0/1:21,1:21:1.99:2,0,496	0/0:20,1:20:42.09:0,42,561	0/0:21,0:20:22.24:0,22,857	0/0:20,1:21:7.45:0,7,740	0/1:22,1:21:30.24:30,0,568
chr10	51551585	.	GCA	G	482.25	PASS	AB=1.000;AC=17;AF=0.340;AN=50;BaseQRankSum=4.297;DP=477;FS=14.775;HRun=0;HaplotypeScore=95.3203;InbreedingCoeff=0.4495;MQ=47.92;MQ0=42;MQRankSum=3.432;QD=2.58;ReadPosRankSum=1.994;VQSLOD=0.8305;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:20:22.09:22,0,67	0/0:4,0:4:4.74:0,5,16	./.	./.	0/0:20,0:19:6.02:0,6,91	0/0:19,0:18:0:0,0,0	1/1:19,0:15:2.79:17,3,0	0/0:23,0:15:17.86:0,18,155	0/0:11,0:9:18.04:0,18,229	0/0:30,0:28:47.25:0,47,612	./.	1/1:23,0:19:3.63:89,4,0	1/1:10,2:9:17.97:154,18,0	0/0:11,0:10:6.02:0,6,91	0/1:9,0:9:0.13:0,0,0	0/0:8,0:7:0:0,0,0	0/0:28,0:27:37.06:0,37,508	0/0:13,0:11:4.38:0,4,23	0/1:11,0:7:14.49:14,0,197	0/1:13,0:13:10.21:10,0,226	0/0:25,3:28:8.01:0,8,497	1/1:14,0:13:5.91:45,6,0	1/1:23,0:22:17.84:135,18,0	1/1:23,0:18:16.60:148,17,0	0/0:24,0:22:21.05:0,21,297	0/0:33,0:32:61.52:0,62,782	0/0:10,0:9:18.06:0,18,259	0/1:17,0:15:0.58:1,0,285
chr10	51551616	.	CAT	C	590.36	PASS	AB=0.995;AC=31;AF=0.596;AN=52;BaseQRankSum=6.163;DP=443;FS=9.734;HRun=0;HaplotypeScore=92.8605;InbreedingCoeff=-0.1067;MQ=39.33;MQ0=71;MQRankSum=-0.906;QD=1.62;ReadPosRankSum=-3.375;VQSLOD=-0.0619;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:19,0:13:3.50:3,0,42	0/1:5,0:5:12.18:12,0,15	./.	./.	0/0:16,1:14:5.83:0,6,74	1/1:12,1:11:8.95:68,9,0	1/1:7,3:6:2.87:34,3,0	0/0:26,0:15:37.61:0,38,268	0/0:15,0:11:14.98:0,15,167	0/1:26,1:21:27.32:27,0,568	1/1:11,0:6:0.16:19,0,0	1/1:22,0:17:8.70:41,9,0	1/1:10,1:7:9.25:44,9,0	0/1:13,0:10:33.54:34,0,74	0/1:9,0:9:0:0,0,0	1/1:8,2:7:2.75:26,3,0	0/1:28,0:25:17.20:17,0,439	0/1:12,0:10:14.10:120,0,14	0/1:15,0:10:12.36:12,0,189	0/1:12,0:12:18.46:18,0,179	0/1:29,0:26:66.90:67,0,370	1/1:13,2:13:0.47:1,0,0	1/1:17,0:15:5.41:29,5,0	1/1:22,1:17:7.12:54,7,0	0/0:21,0:18:18.05:0,18,239	0/1:30,0:24:33.58:34,0,585	0/1:15,0:11:26.88:27,0,189	0/1:17,0:14:54.40:54,0,189
chr10	51551626	.	CAG	C	750.78	PASS	AB=0.857;AC=26;AF=0.565;AN=46;BaseQRankSum=-0.726;DP=403;FS=0.000;HRun=0;HaplotypeScore=79.2682;InbreedingCoeff=0.4397;MQ=38.74;MQ0=74;MQRankSum=0.940;QD=3.12;ReadPosRankSum=-0.012;VQSLOD=1.8881;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:4,0:4:3.86:0,4,23	./.	./.	0/1:9,0:12:0.17:0,0,0	0/0:13,0:10:8.86:0,9,57	0/0:7,0:3:3.01:0,3,43	./.	0/0:11,0:7:0:0,0,0	1/1:27,0:19:5.97:51,6,0	1/1:10,0:5:6:57,6,0	1/1:13,0:14:5.59:26,6,0	1/1:9,0:8:2.74:12,3,0	1/1:14,0:9:5.84:55,6,0	0/0:2,0:11:2.77:0,3,43	0/0:10,0:6:2.99:0,3,24	1/1:25,0:21:21.02:210,21,0	0/1:14,0:12:11.62:12,0,43	1/1:11,0:7:8.59:54,9,0	1/1:9,0:9:3.01:32,3,0	1/1:26,0:22:17.46:133,17,0	./.	0/0:12,0:16:0:0,0,0	0/0:16,0:13:2.58:0,3,20	0/0:10,8:15:0.47:0,0,1	1/1:21,3:17:9:88,9,0	1/1:17,1:13:11.94:99,12,0	1/1:17,0:13:6:56,6,0
chr10	51553289	.	GCACA	G	2151.04	PASS	AB=0.768;AC=19;AF=0.365;AN=52;BaseQRankSum=3.758;DP=717;FS=5.442;HRun=0;HaplotypeScore=139.9924;InbreedingCoeff=0.6105;MQ=54.90;MQ0=22;MQRankSum=-0.056;QD=6.98;ReadPosRankSum=2.193;VQSLOD=1.8512;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:18,11:29:18.06:280,18,0	0/1:7,2:10:3.50:60,0,4	./.	./.	0/0:17,0:17:18.04:0,18,341	1/1:11,0:20:14.51:125,15,0	1/1:22,0:30:6.01:56,6,0	0/0:25,0:25:6.45:0,6,85	1/1:14,9:24:18.05:261,18,0	0/0:22,0:23:29.78:0,30,452	0/0:11,0:10:18.05:0,18,361	1/1:18,12:34:23.42:336,23,0	1/1:12,12:27:32.29:439,32,0	0/0:27,1:32:35.58:0,36,660	0/0:21,0:29:0.52:0,1,67	0/1:15,2:33:74.75:124,0,75	0/0:28,0:28:36.30:0,36,577	0/1:28,1:31:53.07:53,0,163	0/0:10,0:9:5.69:0,6,76	0/0:17,0:17:11.85:0,12,251	0/0:57,0:68:15.76:0,16,910	1/1:11,8:22:3.02:141,3,0	0/0:10,0:10:3.01:0,3,40	1/1:26,16:41:26.51:462,27,0	0/0:25,0:27:19.80:0,20,733	0/0:12,0:12:11.07:0,11,161	0/0:15,0:20:30.55:0,31,509	0/0:12,0:11:8.99:0,9,161
chr10	51556366	.	G	GA	337.36	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=4.200;DP=441;FS=2.274;HRun=7;HaplotypeScore=63.8532;InbreedingCoeff=0.6964;MQ=51.74;MQ0=38;MQRankSum=-4.171;QD=4.89;ReadPosRankSum=0.104;VQSLOD=-0.2867;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:42:0,42,395	0/0:3,0:3:6.01:0,6,58	0/1:41,0:5:0.96:1,0,13	0/0:34,0:6:8.05:0,8,48	0/0:19,0:18:30.04:0,30,289	1/1:1,12:12:24.07:290,24,0	1/1:6,8:13:15:164,15,0	0/0:22,0:21:41.98:0,42,385	0/0:8,0:7:8.33:0,8,86	0/0:21,0:20:36.04:0,36,347	0/0:18,0:18:26.96:0,27,255	0/0:12,0:12:9:0,9,87	0/0:12,0:11:8.93:0,9,82	0/0:9,0:9:18.01:0,18,174	0/0:17,0:16:24.02:0,24,232	0/0:9,0:9:21.03:0,21,202	0/0:14,0:14:30.03:0,30,289	0/0:26,0:26:38.31:0,38,355	0/0:17,0:17:39.05:0,39,371	0/0:19,0:19:33:0,33,307	0/0:9,0:8:13.57:0,14,120	0/0:8,0:8:21.02:0,21,198	0/0:12,0:12:30.03:0,30,283	0/0:9,0:9:15.02:0,15,145	0/0:12,0:12:18.02:0,18,174	0/0:15,0:14:27.01:0,27,251	0/0:21,0:21:51.04:0,51,486	0/0:6,0:6:9.01:0,9,87
chr10	51556378	.	CAA	C	999.91	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=6.963;DP=421;FS=8.473;HRun=16;HaplotypeScore=55.4207;InbreedingCoeff=0.9087;MQ=56.60;MQ0=24;MQRankSum=-1.916;QD=7.19;ReadPosRankSum=5.170;VQSLOD=-0.4921;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,19:23:41.78:351,42,0	1/1:3,0:3:3.98:15,4,0	0/0:37,0:8:20.53:0,21,173	0/0:22,0:8:13.95:0,14,109	0/0:12,0:15:40.72:0,41,396	1/1:5,0:11:16.45:70,16,0	1/1:5,0:10:13.70:58,14,0	0/0:16,0:22:43.08:0,43,399	0/0:8,0:8:18.54:0,19,159	0/0:19,0:20:42.73:0,43,505	0/0:14,0:17:34.69:0,35,349	1/1:5,4:9:5.93:47,6,0	1/1:3,7:10:11.83:140,12,0	0/0:13,0:13:24.92:0,25,291	1/1:6,0:13:10.58:46,11,0	1/1:2,0:8:13.69:59,14,0	0/0:17,0:17:23.58:0,24,355	1/1:6,0:23:26.39:118,26,0	0/0:19,0:19:33.09:0,33,412	0/0:13,0:19:29.93:0,30,362	0/0:9,0:10:23.39:0,23,237	1/1:5,3:8:8.95:75,9,0	1/1:2,7:11:26.21:186,26,0	1/1:3,4:7:5.94:50,6,0	0/0:15,0:16:33.03:0,33,384	0/0:17,0:17:31.22:0,31,331	0/0:17,0:19:30.06:0,30,430	0/0:7,0:7:9.03:0,9,118
chr10	51556575	.	G	GT	946.55	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-5.523;DP=458;FS=6.889;HRun=8;HaplotypeScore=46.3572;InbreedingCoeff=0.8330;MQ=80.40;MQ0=0;MQRankSum=-0.809;QD=24.27;ReadPosRankSum=0.708;VQSLOD=4.2112;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:66.03:0,66,604	0/0:4,0:4:6:0,6,55	0/0:14,1:15:21:0,21,243	0/0:10,0:10:23.11:0,23,210	0/0:26,0:26:69.03:0,69,630	1/1:1,20:21:57.17:658,57,0	1/1:3,13:18:38.78:410,39,0	0/0:34,0:34:84.02:0,84,769	0/0:16,0:16:45.02:0,45,412	0/0:19,0:19:48.03:0,48,439	0/0:11,0:11:24:0,24,220	0/0:6,0:6:15.01:0,15,137	0/0:8,0:8:24.01:0,24,220	0/0:14,0:14:36.01:0,36,329	0/0:20,0:20:51.02:0,51,467	0/0:23,0:23:63.03:0,63,576	0/0:11,0:11:0.72:0,1,218	0/0:11,0:11:27.01:0,27,247	0/0:22,0:22:56.98:0,57,511	0/0:13,0:13:33.02:0,33,302	0/0:12,0:12:36:0,36,324	0/0:8,0:8:24.01:0,24,220	0/0:12,0:12:33.02:0,33,302	0/0:13,0:13:36.02:0,36,330	0/0:20,0:20:60.03:0,60,549	0/0:26,0:26:66.03:0,66,604	0/0:29,0:29:75.02:0,75,686	0/0:11,0:11:24.01:0,24,220
chr10	51556757	.	GCA	G	189.83	PASS	AB=0.877;AC=10;AF=0.200;AN=50;BaseQRankSum=1.265;DP=563;FS=23.950;HRun=0;HaplotypeScore=80.2687;InbreedingCoeff=-0.2774;MQ=66.15;MQ0=6;MQRankSum=1.347;QD=1.10;ReadPosRankSum=0.168;VQSLOD=-0.3615;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:33:14.99:0,15,142	0/0:3,0:6:3:0,3,26	./.	./.	0/1:16,2:18:20.51:21,0,80	0/0:22,0:23:6.83:0,7,134	0/0:25,0:27:12.03:0,12,159	./.	0/1:16,0:16:13.99:14,0,205	0/1:8,2:10:35.52:56,0,36	0/1:11,5:16:53.01:53,0,57	0/0:12,0:11:5.98:0,6,55	0/0:9,0:13:6.44:0,6,47	0/1:11,6:17:79.26:79,0,116	0/0:11,0:26:21:0,21,183	0/0:11,0:22:21.01:0,21,198	0/1:24,2:26:5.45:5,0,288	0/0:19,0:19:19.66:0,20,194	0/1:10,0:11:2.13:2,0,83	0/0:15,0:14:15.05:0,15,217	0/0:27,0:27:9.02:0,9,113	0/0:13,0:12:6.01:0,6,70	0/0:15,0:14:6:0,6,53	0/0:24,0:23:8.56:0,9,72	0/1:22,2:24:8.55:9,0,182	0/1:21,2:23:14.53:15,0,155	0/0:20,0:21:27.94:0,28,506	0/1:9,1:10:53.45:64,0,53
chr10	51558042	.	A	ATGTGTGTG	2012.78	PASS	AB=1.000;AC=21;AF=0.404;AN=52;BaseQRankSum=2.465;DP=605;FS=0.000;HRun=0;HaplotypeScore=161.3728;InbreedingCoeff=0.7610;MQ=50.44;MQ0=19;MQRankSum=0.024;QD=9.28;ReadPosRankSum=-0.589;VQSLOD=2.5589;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:26:9.01:185,9,0	1/1:6,0:5:6.02:143,6,0	./.	./.	0/0:31,0:30:54.72:0,55,1169	0/0:16,0:15:8.60:0,9,196	0/1:18,0:15:6.70:7,0,68	0/0:31,0:30:27.55:0,28,538	0/0:25,0:25:41.98:0,42,876	0/0:29,0:27:3.95:0,4,548	0/0:16,0:15:7.11:0,7,452	1/1:18,1:22:18:432,18,0	1/1:18,3:22:21.04:504,21,0	0/0:23,0:23:14.58:0,15,941	1/1:16,0:15:2.96:19,3,0	1/1:23,0:18:9.01:178,9,0	0/0:25,0:24:26.80:0,27,870	1/1:7,0:6:6.01:105,6,0	0/0:19,0:16:12.08:0,12,304	0/0:19,0:19:32.84:0,33,657	0/0:47,0:43:57.72:0,58,1079	1/1:17,0:17:3.01:100,3,0	1/1:18,2:22:8.82:172,9,0	1/1:36,1:34:24.48:356,24,0	0/0:21,0:20:47.63:0,48,873	0/0:24,0:24:45.07:0,45,846	0/0:17,0:17:19.16:0,19,365	0/0:11,0:12:20.98:0,21,373
chr10	51558100	.	CAG	C	1467.62	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=6.328;DP=656;FS=13.630;HRun=0;HaplotypeScore=104.5780;InbreedingCoeff=0.9308;MQ=57.08;MQ0=25;MQRankSum=1.798;QD=9.92;ReadPosRankSum=-1.462;VQSLOD=2.1605;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,14:20:5.89:56,6,0	0/0:4,0:3:3.01:0,3,52	0/0:35,0:10:23.93:0,24,275	0/0:62,0:17:13.78:0,14,227	0/0:26,0:26:56.98:0,57,925	0/0:22,0:19:32.74:0,33,541	0/0:21,0:18:36.12:0,36,616	0/0:25,0:24:60.18:0,60,919	0/0:20,0:20:44.68:0,45,646	0/0:17,0:17:40.01:0,40,651	0/0:18,0:17:45.09:0,45,640	1/1:3,17:20:29.49:332,29,0	1/1:6,21:27:23.19:318,23,0	0/0:17,0:17:41.86:0,42,656	0/0:11,0:11:30.10:0,30,518	0/0:17,0:15:39.03:0,39,608	0/0:24,0:23:60.18:0,60,1000	0/0:11,0:11:33.06:0,33,491	0/0:21,0:19:39.13:0,39,646	0/0:18,0:18:42.06:0,42,640	0/0:51,0:49:99:0,115,1894	1/1:1,14:15:26.85:337,27,0	1/1:5,16:21:11.73:159,12,0	1/1:4,41:45:36.03:445,36,0	0/0:32,0:31:81.22:0,81,1281	0/0:22,0:21:57.17:0,57,869	0/0:19,0:19:47.71:0,48,699	0/0:15,0:15:42.10:0,42,669
chr10	51558108	.	GAC	G	518.45	PASS	AB=0.986;AC=9;AF=0.161;AN=56;BaseQRankSum=9.215;DP=664;FS=8.678;HRun=0;HaplotypeScore=105.6837;InbreedingCoeff=0.5067;MQ=62.55;MQ0=19;MQRankSum=2.480;QD=3.58;ReadPosRankSum=-1.514;VQSLOD=1.7377;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:21,1:22:15.79:16,0,33	0/0:3,0:3:6:0,6,82	0/0:45,0:20:31.49:0,31,442	0/0:67,0:25:9.50:0,10,325	0/0:23,0:23:60.01:0,60,1098	0/0:21,0:19:32.75:0,33,625	0/0:20,0:18:36.12:0,36,693	0/0:25,0:25:69.12:0,69,1064	0/0:19,0:19:34.94:0,35,643	0/0:14,0:14:42.14:0,42,770	0/0:20,0:19:49.66:0,50,766	0/1:22,0:22:16.84:129,0,17	1/1:22,1:23:1.38:127,1,0	0/0:16,0:16:33.16:0,33,713	0/0:13,0:13:36.08:0,36,623	0/0:20,0:18:41.62:0,42,730	0/0:21,0:20:57.18:0,57,1042	0/0:13,0:13:36.06:0,36,589	0/0:19,0:19:52.93:0,53,791	0/0:19,0:19:48.12:0,48,805	0/0:44,0:44:95.37:0,95,2066	1/1:14,1:15:26.12:158,26,0	0/1:18,0:18:10.72:47,0,11	1/1:44,1:45:10.61:187,11,0	0/0:34,0:33:93.26:0,93,1606	0/0:24,0:23:62.25:0,62,915	0/0:21,0:21:57.01:0,57,912	0/0:15,0:15:41.62:0,42,709
chr10	51558909	.	AGAGGAGGAGGAGGAGGAGGAGGAG	A	1928.11	PASS	AB=0.896;AC=4;AF=0.077;AN=52;BaseQRankSum=4.639;DP=309;FS=2.688;HRun=0;HaplotypeScore=171.8153;InbreedingCoeff=0.1646;MQ=89.01;MQ0=8;MQRankSum=-3.701;QD=24.41;ReadPosRankSum=-1.003;VQSLOD=2.7121;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:15.05:0,15,693	0/0:2,0:2:3.01:0,3,136	0/0:19,0:14:2.37:0,2,8	0/1:24,0:21:11.27:11,0,163	0/0:12,0:12:6.02:0,6,464	1/1:20,16:36:18.06:1132,18,0	0/1:14,5:18:99:892,0,161	0/0:7,0:7:3.78:0,4,11	0/0:6,0:5:9.03:0,9,438	0/0:7,0:7:8.24:0,8,343	0/0:2,0:2:3.01:0,3,272	0/0:11,0:15:15.89:0,16,324	0/0:11,0:11:12.04:0,12,419	./.	0/0:15,0:15:18.05:0,18,678	0/0:10,0:13:18.06:0,18,652	0/0:16,0:15:9.89:0,10,276	0/0:12,0:13:15.05:0,15,558	0/0:7,0:7:9.02:0,9,215	0/0:5,0:5:4.57:0,5,79	0/0:15,0:13:21.06:0,21,1108	0/0:7,0:8:9.03:0,9,201	0/0:7,0:7:12.03:0,12,448	0/0:8,0:8:12.04:0,12,538	0/0:5,0:5:3:0,3,26	0/0:11,0:10:3.01:0,3,51	./.	0/0:1,0:1:3.01:0,3,291
chr10	51559266	.	TC	T	5071	PASS	AB=0.962;AC=25;AF=0.446;AN=56;BaseQRankSum=10.190;DP=607;FS=2.429;HRun=10;HaplotypeScore=71.5190;InbreedingCoeff=0.9133;MQ=80.46;MQ0=1;MQRankSum=-2.659;QD=15.85;ReadPosRankSum=5.225;VQSLOD=5.3554;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:5,44:49:99:1042,120,0	1/1:0,7:8:17.03:136,17,0	0/1:23,1:24:2.90:3,0,298	0/0:15,0:15:13.23:0,13,155	0/0:14,1:15:13.04:0,13,364	1/1:3,0:31:55:162,55,0	1/1:4,0:31:48.89:144,49,0	0/0:23,0:24:35.29:0,35,356	0/0:19,0:19:54.13:0,54,588	0/0:9,0:9:18.05:0,18,199	0/0:13,0:13:27.06:0,27,283	1/1:1,15:16:44.99:390,45,0	1/1:4,15:19:29.90:260,30,0	0/0:37,0:37:96.20:0,96,1026	1/1:2,32:34:86.98:755,87,0	1/1:5,22:27:59.97:521,60,0	0/0:41,2:43:75.98:0,76,1023	1/1:2,23:25:65.99:573,66,0	0/0:15,0:15:36.07:0,36,375	0/0:11,0:11:27.05:0,27,279	0/0:33,0:33:60.14:0,60,647	1/1:0,9:9:20.94:175,21,0	1/1:4,15:19:41.98:364,42,0	1/1:3,23:26:62.99:547,63,0	0/0:12,1:13:4.04:0,4,273	0/0:10,0:10:24.06:0,24,258	0/0:24,1:25:37.11:0,37,630	0/0:5,0:5:9.02:0,9,100
chr10	51560434	.	TACACACACACACACACACACAC	T	1454.72	PASS	AC=12;AF=0.222;AN=54;BaseQRankSum=6.217;DP=543;FS=6.111;HRun=0;HaplotypeScore=251.0689;InbreedingCoeff=0.7236;MQ=60.28;MQ0=12;MQRankSum=-5.683;QD=13.47;ReadPosRankSum=-1.479;VQSLOD=1.7699;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:25,5:30:9.02:265,9,0	./.	0/0:52,0:18:1.55:0,2,4	0/0:53,0:23:3.01:0,3,92	0/0:7,0:12:12.04:0,12,806	0/0:13,0:15:24.08:0,24,1819	0/0:20,0:19:31.66:0,32,1786	0/0:20,0:20:3.48:0,3,136	0/0:14,0:17:39.13:0,39,3143	0/0:15,0:17:25.33:0,25,1726	0/0:14,0:14:12.04:0,12,1030	1/1:8,4:12:6.02:241,6,0	1/1:9,5:15:15.05:846,15,0	0/0:20,0:22:36.10:0,36,2760	0/0:25,0:27:45.15:0,45,2966	0/0:13,0:21:45.15:0,45,3170	0/0:25,0:24:45.63:0,46,3665	0/0:11,0:12:21.07:0,21,1129	0/0:20,0:19:35.79:0,36,2238	0/0:12,0:13:27.08:0,27,1779	0/0:19,0:19:18.06:0,18,1568	1/1:9,2:10:3.01:73,3,0	1/1:8,3:11:6.02:110,6,0	1/1:23,0:27:2.49:72,2,0	0/0:6,0:6:9.03:0,9,605	0/0:18,0:18:42.14:0,42,3045	0/0:23,0:23:45.15:0,45,3845	0/0:4,0:4:6.02:0,6,608
chr10	51563176	.	TTGG	T	548.90	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=4.812;DP=656;FS=12.288;HRun=0;HaplotypeScore=104.5698;InbreedingCoeff=0.7578;MQ=67.78;MQ0=6;MQRankSum=-1.065;QD=9.46;ReadPosRankSum=0.536;VQSLOD=2.0089;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:36.11:0,36,653	0/0:4,0:4:3.01:0,3,61	0/0:28,0:19:12.03:0,12,174	0/0:38,0:33:42.12:0,42,687	0/0:23,0:22:39.08:0,39,672	1/1:15,8:23:19.31:271,19,0	1/1:9,26:34:30.09:397,30,0	0/0:24,0:23:39.11:0,39,694	0/0:23,0:23:42.13:0,42,784	0/0:16,0:16:12.03:0,12,209	0/0:10,0:10:9.03:0,9,165	0/0:26,0:26:42.13:0,42,813	0/0:28,0:28:46.96:0,47,860	0/0:32,0:32:32.42:0,32,1284	0/0:25,0:25:34.04:0,34,628	0/0:18,0:18:39.10:0,39,661	0/0:35,0:34:70.29:0,70,1486	0/0:18,0:18:25.91:0,26,546	0/0:21,0:21:24.54:0,25,417	0/0:20,0:20:21.05:0,21,376	0/0:51,0:51:52.36:0,52,865	0/0:22,0:22:15.05:0,15,301	0/0:17,0:17:9.48:0,9,145	0/0:32,0:32:72.70:0,73,1422	0/0:9,0:9:6.02:0,6,121	0/0:28,0:28:36.12:0,36,727	0/0:18,0:18:48.15:0,48,902	0/0:3,0:3:6.02:0,6,121
chr10	51563202	.	G	GGTGT	1618.89	PASS	AB=0.787;AC=20;AF=0.385;AN=52;BaseQRankSum=2.853;DP=565;FS=0.000;HRun=0;HaplotypeScore=132.9157;InbreedingCoeff=0.3741;MQ=52.73;MQ0=22;MQRankSum=-1.878;QD=6.18;ReadPosRankSum=-1.243;VQSLOD=2.3991;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:22:11.78:225,12,0	1/1:3,0:4:2.85:53,3,0	./.	./.	0/0:14,0:15:18.04:0,18,241	0/0:17,0:19:21.04:0,21,267	0/1:32,0:38:46.69:47,0,93	0/0:35,0:32:0.43:0,0,43	0/1:13,0:20:30.09:47,0,30	0/0:10,0:10:11.27:0,11,186	0/0:3,0:4:6.01:0,6,75	0/1:16,5:25:35.31:110,0,35	0/1:21,8:32:28.22:203,0,28	0/0:25,0:26:5.56:0,6,162	1/1:18,0:24:5.74:111,6,0	1/1:19,0:21:26.84:302,27,0	0/0:32,0:33:36.11:0,36,534	1/1:15,0:16:3.98:236,4,0	0/0:21,0:19:9.02:0,9,103	0/0:12,0:12:6.01:0,6,94	0/0:39,0:37:7.01:0,7,161	1/1:9,4:15:2.70:70,3,0	1/1:8,0:9:2.68:61,3,0	1/1:21,9:34:21.22:322,21,0	0/0:13,0:14:12.03:0,12,168	0/0:22,0:23:5.79:0,6,227	0/0:15,0:15:9.03:0,9,138	0/0:3,0:3:2.99:0,3,23
chr10	51563705	.	A	AT	1340.92	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-8.938;DP=673;FS=6.534;HRun=3;HaplotypeScore=62.6810;InbreedingCoeff=0.9993;MQ=79.09;MQ0=0;MQRankSum=-1.398;QD=30.48;ReadPosRankSum=0.488;VQSLOD=3.1799;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,114,1352	0/0:11,0:11:30.09:0,30,360	0/0:16,0:15:36.06:0,36,406	0/0:17,0:17:44.81:0,45,450	0/0:25,0:25:69.20:0,69,816	1/1:4,29:33:75.25:1042,75,0	1/1:0,11:11:30.10:420,30,0	0/0:30,0:30:78.23:0,78,925	0/0:21,0:21:63.18:0,63,745	0/0:21,0:21:51.15:0,51,603	0/0:26,0:26:78.23:0,78,923	0/0:22,0:22:57.17:0,57,682	0/0:19,0:19:51.14:0,51,599	0/0:26,0:26:78.23:0,78,924	0/0:28,0:28:81.22:0,81,948	0/0:34,0:34:93.27:0,93,1105	0/0:31,0:31:83.61:0,84,967	0/0:30,0:30:84.26:0,84,1006	0/0:22,0:22:60.16:0,60,701	0/0:26,0:26:72.21:0,72,850	0/0:18,0:18:54.17:0,54,648	0/0:16,0:16:48.15:0,48,576	0/0:23,0:23:69.17:0,69,792	0/0:31,0:31:72.19:0,72,850	0/0:24,0:24:69.19:0,69,807	0/0:20,0:20:57.17:0,57,681	0/0:40,0:40:99:0,111,1319	0/0:12,0:12:33.10:0,33,396
chr10	51566626	.	A	AT	1402.32	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=-8.538;DP=557;FS=0.553;HRun=8;HaplotypeScore=60.9106;InbreedingCoeff=0.8639;MQ=75.02;MQ0=0;MQRankSum=0.106;QD=21.25;ReadPosRankSum=1.185;VQSLOD=3.8607;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:39.38:0,39,522	1/1:1,8:9:21.06:242,21,0	0/0:15,0:15:35.91:0,36,303	0/1:10,0:9:6.58:7,0,68	0/0:21,0:21:54.01:0,54,489	0/0:4,0:23:40.74:0,41,119	0/0:0,0:16:30.07:0,30,88	0/0:31,0:31:78.04:0,78,714	0/0:14,0:14:39.01:0,39,353	0/0:29,0:29:81.04:0,81,741	0/0:22,0:22:60.01:0,60,544	0/0:13,0:13:39.02:0,39,357	0/0:24,0:24:60.02:0,60,549	0/0:27,0:27:78.04:0,78,714	1/1:3,12:15:29.93:346,30,0	1/1:1,9:10:27.08:312,27,0	0/0:25,0:25:66:0,66,598	1/1:3,19:22:57.17:658,57,0	0/0:17,0:17:38.99:0,39,348	0/0:25,0:25:69.02:0,69,627	0/0:14,0:14:33.01:0,33,302	0/0:11,0:11:33.02:0,33,302	0/0:33,0:34:83.02:0,83,739	0/0:11,0:11:30.02:0,30,275	0/0:23,0:23:60:0,60,544	0/0:22,0:22:60.02:0,60,545	0/0:39,0:39:99:0,102,933	0/0:12,0:12:6.18:0,6,199
chr10	51567667	.	T	TTGTG	2380.98	PASS	AB=0.821;AC=24;AF=0.429;AN=56;BaseQRankSum=11.346;DP=629;FS=0.928;HRun=0;HaplotypeScore=140.6249;InbreedingCoeff=0.5076;MQ=59.43;MQ0=4;MQRankSum=-3.938;QD=7.44;ReadPosRankSum=1.033;VQSLOD=2.1639;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:22:11.30:93,11,0	1/1:5,0:10:6.02:105,6,0	0/0:26,0:19:11.54:0,12,163	0/1:18,0:12:12.13:12,0,41	0/0:27,0:28:32.48:0,32,644	1/1:21,0:19:8.24:119,8,0	1/1:19,0:19:5.64:126,6,0	0/0:29,0:31:26.99:0,27,354	0/0:22,0:23:39.13:0,39,609	0/0:28,0:30:54.16:0,54,807	0/0:22,0:22:36.12:0,36,573	0/1:6,0:19:12.52:111,0,13	0/1:12,0:24:96.11:96,0,106	0/0:16,0:17:21.06:0,21,318	1/1:20,0:29:33.11:590,33,0	1/1:18,0:27:30.09:504,30,0	0/1:24,0:24:1.98:2,0,654	1/1:11,1:17:24.05:426,24,0	0/0:21,0:21:42.12:0,42,618	0/0:23,0:24:45.13:0,45,683	0/1:16,0:16:23.77:24,0,248	1/1:11,0:31:1.11:204,1,0	0/1:9,0:18:28.85:55,0,29	1/1:9,0:23:24.33:110,24,0	0/0:19,0:19:24.08:0,24,388	0/0:22,0:22:33.09:0,33,508	0/0:29,0:28:69.23:0,69,1109	0/0:14,0:14:24.08:0,24,384
chr10	51568377	.	ACTCTCTCT	A	371.53	PASS	AB=1.000;AC=13;AF=0.325;AN=40;BaseQRankSum=3.519;DP=531;FS=11.349;HRun=0;HaplotypeScore=120.3170;InbreedingCoeff=0.4394;MQ=66.38;MQ0=11;MQRankSum=-3.948;QD=2.88;ReadPosRankSum=0.830;VQSLOD=1.7520;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	0/0:20,0:20:3.01:0,3,107	0/1:21,0:21:8.99:9,0,18	1/1:15,0:17:3.01:56,3,0	0/0:26,0:26:0.47:0,0,1	0/0:23,0:23:18.04:0,18,584	0/0:19,0:19:3.48:0,3,30	./.	1/1:13,3:15:3.01:74,3,0	1/1:17,0:17:3.01:56,3,0	0/0:19,0:20:9.92:0,10,205	0/0:19,0:19:3.01:0,3,49	1/1:18,0:21:11.93:183,12,0	0/0:25,0:24:9.01:0,9,227	0/0:21,0:21:12.04:0,12,288	./.	0/0:11,0:11:0.89:0,1,2	0/0:13,0:12:2.94:0,3,18	1/1:18,0:19:2.90:16,3,0	./.	1/1:14,2:17:6.02:105,6,0	0/0:17,0:17:9.03:0,9,353	0/0:24,0:24:9.01:0,9,202	0/0:11,0:10:2.99:0,3,24	./.
chr10	51569941	.	TATA	T	256.89	PASS	AC=4;AF=0.111;AN=36;BaseQRankSum=2.242;DP=185;FS=0.000;HRun=0;HaplotypeScore=29.8870;InbreedingCoeff=0.3718;MQ=71.78;MQ0=2;MQRankSum=1.948;QD=12.84;ReadPosRankSum=2.087;VQSLOD=2.7583;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:6:2.94:0,3,18	1/1:2,1:3:3.01:40,3,0	./.	./.	0/0:5,0:5:9.03:0,9,172	0/0:4,0:4:3.01:0,3,40	0/0:2,0:2:3.01:0,3,40	0/0:30,0:28:24.08:0,24,311	./.	0/0:4,0:4:6.02:0,6,102	0/0:5,0:5:12.04:0,12,230	0/0:4,0:4:3.01:0,3,36	0/0:4,0:5:3.01:0,3,39	0/0:2,0:2:3.01:0,3,39	./.	./.	0/0:23,1:24:5.65:0,6,752	1/1:8,9:17:24.08:316,24,0	0/0:6,0:8:5.93:0,6,56	./.	0/0:5,0:7:6.02:0,6,79	./.	./.	./.	0/0:11,0:11:25.33:0,25,444	./.	0/0:6,0:8:9.03:0,9,117	0/0:6,0:6:15.05:0,15,288
chr10	51570045	.	CTTAG	C	1249.84	PASS	AC=8;AF=0.148;AN=54;BaseQRankSum=7.042;DP=228;FS=0.000;HRun=0;HaplotypeScore=39.4004;InbreedingCoeff=0.7357;MQ=80.73;MQ0=0;MQRankSum=-4.542;QD=43.10;ReadPosRankSum=1.560;VQSLOD=3.5474;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:8:24.08:0,24,598	1/1:0,2:2:6.02:112,6,0	0/0:17,0:17:37.70:0,38,962	0/0:1,0:1:3.01:0,3,79	0/0:6,0:6:18.06:0,18,480	0/0:8,0:8:21.07:0,21,559	0/0:3,0:3:9.03:0,9,240	0/0:31,0:31:87.28:0,87,2161	0/0:1,0:1:3.01:0,3,80	0/0:8,0:8:21.07:0,21,560	0/0:15,0:15:45.15:0,45,1178	0/0:7,0:7:18.06:0,18,480	0/0:5,0:5:15.05:0,15,400	0/0:4,0:4:12.04:0,12,314	1/1:0,6:6:18.06:336,18,0	1/1:0,2:2:6.02:112,6,0	0/0:28,0:28:84.29:0,84,2200	1/1:1,18:19:45.15:833,45,0	0/0:8,0:8:24.08:0,24,609	0/0:3,0:3:9.03:0,9,240	0/0:2,0:2:3.01:0,3,80	0/0:2,0:2:6.02:0,6,160	0/0:7,0:7:18.06:0,18,479	./.	0/0:12,0:12:33.11:0,33,880	0/0:7,0:7:21.07:0,21,560	0/0:9,0:8:27.09:0,27,718	0/0:7,0:7:20.99:0,21,388
chr10	51572017	.	C	CTTCA	1496.10	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-6.428;DP=778;FS=1.693;HRun=0;HaplotypeScore=138.0873;InbreedingCoeff=0.9902;MQ=70.31;MQ0=0;MQRankSum=0.856;QD=30.53;ReadPosRankSum=-0.820;VQSLOD=3.5305;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,120,1830	0/0:12,0:12:27.07:0,27,396	0/0:37,0:37:27.53:0,28,472	0/0:25,0:22:18.05:0,18,264	0/0:40,0:40:78.22:0,78,1217	1/1:3,23:26:36.12:882,36,0	1/1:6,17:23:30.10:735,30,0	0/0:32,0:32:51.17:0,51,799	0/0:32,0:32:78.27:0,78,1283	0/0:25,0:25:51.17:0,51,833	0/0:24,0:24:60.20:0,60,982	0/0:27,0:27:54.18:0,54,864	0/0:26,0:26:63.18:0,63,965	0/0:19,0:19:54.17:0,54,837	0/0:42,0:42:96.32:0,96,1537	0/0:33,0:33:81.28:0,81,1311	0/0:41,0:41:99:0,111,1777	0/0:18,0:18:39.11:0,39,591	0/0:23,0:23:45.13:0,45,693	0/0:22,0:22:42.14:0,42,691	0/0:31,0:31:60.17:0,60,922	0/0:25,0:25:60.20:0,60,980	0/0:23,0:23:42.14:0,42,686	0/0:37,0:36:93.29:0,93,1442	0/0:20,0:20:33.10:0,33,522	0/0:35,0:35:78.25:0,78,1213	0/0:23,0:23:57.18:0,57,890	0/0:11,0:10:18.06:0,18,292
chr10	51572138	.	T	TTG	233.66	PASS	AB=1.000;AC=19;AF=0.396;AN=48;BaseQRankSum=-2.597;DP=674;FS=4.437;HRun=0;HaplotypeScore=111.6076;InbreedingCoeff=0.2908;MQ=72.25;MQ0=21;MQRankSum=0.866;QD=0.82;ReadPosRankSum=-1.013;VQSLOD=2.0525;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:40,0:38:6.88:67,7,0	./.	./.	0/0:29,0:23:0:0,0,0	0/0:17,0:16:3:0,3,25	0/1:22,0:21:0.11:0,0,0	1/1:25,0:24:0.47:1,0,0	./.	0/0:24,0:23:2.50:0,2,25	1/1:32,0:32:0.47:1,0,0	0/0:17,0:17:2.50:0,2,9	1/1:24,0:24:6.46:49,6,0	1/1:17,0:17:5.71:75,6,0	0/0:29,0:29:2.51:0,3,7	0/0:21,0:22:2.82:0,3,14	0/0:19,0:22:8.35:0,8,41	0/0:28,0:32:2.84:0,3,14	1/1:19,0:17:0.47:1,0,0	0/0:27,0:26:2.71:0,3,12	0/0:17,0:17:0.45:0,0,1	0/0:36,0:34:2.80:0,3,14	0/1:14,0:13:6.92:17,0,7	1/1:11,4:14:2.70:43,3,0	0/1:50,0:48:72.97:94,0,73	0/0:23,0:22:5.98:0,6,57	1/1:26,0:26:0.47:2,0,0	0/0:20,0:19:5.96:0,6,55	./.
chr10	51573166	.	AC	A	1352.61	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.531;DP=769;FS=0.000;HRun=4;HaplotypeScore=75.1607;InbreedingCoeff=0.9973;MQ=82.43;MQ0=0;MQRankSum=-1.940;QD=28.18;ReadPosRankSum=-1.845;VQSLOD=2.3729;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,141,1948	0/0:11,0:11:27.09:0,27,378	0/0:20,0:20:57.19:0,57,795	0/0:22,0:22:48.14:0,48,646	0/0:24,0:24:60.19:0,60,821	1/1:0,19:19:54.17:648,54,0	1/1:1,28:29:69.21:826,69,0	0/0:25,0:25:69.22:0,69,950	0/0:29,0:29:78.25:0,78,1070	0/0:40,0:40:99:0,114,1565	0/0:14,0:14:36.11:0,36,486	0/0:35,0:35:99:0,105,1418	0/0:34,0:34:96.31:0,96,1322	0/0:35,0:35:99:0,105,1450	0/0:36,0:36:99:0,108,1492	0/0:28,0:28:84.26:0,84,1141	0/0:39,0:39:99:0,114,1571	0/0:27,0:27:81.24:0,81,1106	0/0:20,0:20:51.15:0,51,695	0/0:21,0:21:57.17:0,57,797	0/0:59,0:58:99:0,172,2392	0/0:25,0:25:72.24:0,72,1006	0/0:15,0:15:45.15:0,45,630	0/0:31,0:31:87.29:0,87,1216	0/0:22,0:22:66.17:0,66,869	0/0:28,0:28:84.26:0,84,1143	0/0:26,0:26:72.23:0,72,990	0/0:7,0:7:21.07:0,21,294
chr10	51574405	.	TC	T	5529.79	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=16.001;DP=596;FS=5.667;HRun=8;HaplotypeScore=72.0636;InbreedingCoeff=0.9977;MQ=78.42;MQ0=0;MQRankSum=-4.594;QD=23.94;ReadPosRankSum=3.824;VQSLOD=5.6402;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,42:50:99:1072,111,0	1/1:0,6:6:18.03:173,18,0	0/0:14,0:14:33.09:0,33,372	0/0:15,0:15:24.95:0,25,249	0/0:37,0:37:89.99:0,90,1053	0/0:21,0:21:57.16:0,57,677	0/0:26,2:28:49.26:0,49,875	0/0:30,0:30:75.22:0,75,896	0/0:19,0:19:57.17:0,57,689	0/0:16,0:16:48.13:0,48,561	0/0:13,0:13:33.09:0,33,387	1/1:1,29:30:78.13:753,78,0	1/1:1,24:25:66.10:637,66,0	0/0:24,0:24:60.17:0,60,713	1/1:2,26:28:72.11:695,72,0	1/1:1,15:16:45.07:435,45,0	0/0:20,0:20:54.17:0,54,652	1/1:2,22:24:60.10:579,60,0	0/0:20,0:20:51.14:0,51,604	0/0:21,1:22:34.20:0,34,676	0/0:25,0:25:66.16:0,66,762	1/1:1,11:12:33.05:319,33,0	1/1:4,10:14:30.04:287,30,0	1/1:5,21:26:60.09:579,60,0	0/0:9,0:9:21.05:0,21,254	0/0:18,0:18:54.15:0,54,632	0/0:23,0:23:69.19:0,69,819	0/0:11,0:11:33.10:0,33,399
chr10	51579282	.	GA	G	1162.98	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.194;DP=630;FS=7.855;HRun=7;HaplotypeScore=61.6623;InbreedingCoeff=0.9895;MQ=75.05;MQ0=2;MQRankSum=-1.778;QD=21.54;ReadPosRankSum=-0.100;VQSLOD=3.0530;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:90.25:0,90,1103	0/0:12,0:12:36.12:0,36,453	0/0:28,0:21:33.31:0,33,445	0/0:24,0:15:14.09:0,14,218	0/0:26,0:26:75.24:0,75,942	1/1:3,28:31:63.14:643,63,0	1/1:0,23:23:63.14:642,63,0	0/0:20,0:20:45.14:0,45,566	0/0:17,0:17:51.16:0,51,642	0/0:20,0:20:57.18:0,57,717	0/0:21,0:21:57.17:0,57,705	0/0:23,0:23:60.19:0,60,755	0/0:21,0:21:57.16:0,57,690	0/0:16,0:16:36.12:0,36,453	0/0:24,0:24:69.13:0,69,823	0/0:26,0:26:78.25:0,78,980	0/0:34,0:34:96.31:0,96,1206	0/0:15,0:15:42.08:0,42,496	0/0:13,0:13:33.11:0,33,415	0/0:24,0:24:72.23:0,72,905	0/0:26,0:26:78.25:0,78,980	0/0:16,0:16:48.15:0,48,604	0/0:24,0:24:72.23:0,72,905	0/0:26,0:26:69.17:0,69,832	0/0:14,0:14:42.12:0,42,514	0/0:26,0:26:75.24:0,75,943	0/0:31,0:31:90.23:0,90,1089	0/0:13,0:13:39.12:0,39,490
chr10	51579870	.	ACCACAC	A	377.64	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=2.430;DP=537;FS=10.895;HRun=0;HaplotypeScore=128.4350;InbreedingCoeff=0.7186;MQ=72.79;MQ0=11;MQRankSum=-1.772;QD=6.74;ReadPosRankSum=0.213;VQSLOD=1.7698;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:41.59:0,42,299	0/0:9,0:9:20.89:0,21,161	0/0:36,0:25:64.97:0,65,644	0/0:26,0:19:47.67:0,48,487	0/0:16,0:15:45.01:0,45,565	1/1:0,16:19:8.97:98,9,0	1/1:17,0:17:41.26:349,41,0	0/0:25,0:23:65.79:0,66,568	0/0:14,0:14:37.10:0,37,402	0/0:20,0:19:56.79:0,57,768	0/0:15,0:15:41.84:0,42,432	0/0:16,0:16:17.87:0,18,292	0/0:14,0:14:10.69:0,11,220	0/0:18,0:18:49.29:0,49,571	0/1:20,0:20:53.92:54,0,166	0/0:29,0:29:11.09:0,11,380	0/0:24,0:24:59.69:0,60,702	0/0:14,0:13:31.54:0,32,233	0/0:7,0:7:21:0,21,300	0/0:16,0:16:47.97:0,48,591	0/0:17,0:16:29.95:0,30,310	0/0:21,0:21:39.64:0,40,327	0/0:25,0:25:43.85:0,44,330	0/0:19,0:19:38.69:0,39,310	0/0:21,0:21:41.81:0,42,423	0/0:15,0:15:40.84:0,41,450	0/0:26,0:24:66.10:0,66,756	0/0:14,0:14:40.64:0,41,498
chr10	51579871	.	CCACACACACACACA	C	1054.08	PASS	AB=0.863;AC=14;AF=0.292;AN=48;BaseQRankSum=5.523;DP=536;FS=38.319;HRun=0;HaplotypeScore=192.8569;InbreedingCoeff=0.5238;MQ=71.77;MQ0=12;MQRankSum=-4.061;QD=6.20;ReadPosRankSum=0.332;VQSLOD=1.3561;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:25,2:27:1.92:18,2,0	./.	./.	./.	0/0:15,0:14:24.08:0,24,964	0/1:20,0:20:62.54:89,0,63	0/0:18,0:17:9.50:0,10,318	0/0:27,0:25:16.61:0,17,493	0/0:14,0:14:18.06:0,18,777	0/0:20,0:19:27.09:0,27,1264	0/0:12,0:14:18.06:0,18,758	1/1:13,2:15:3.01:117,3,0	1/1:10,3:14:3.01:117,3,0	0/0:18,0:18:15.05:0,15,684	1/1:10,9:20:14.53:380,15,0	0/1:18,8:29:76.16:353,0,76	0/0:18,0:23:27.09:0,27,1222	0/0:14,0:13:2.50:0,2,9	0/0:6,0:6:9.03:0,9,468	0/0:16,0:16:24.08:0,24,1114	0/0:16,0:16:12.04:0,12,463	1/1:14,7:21:2.67:82,3,0	1/1:16,8:24:3.01:46,3,0	./.	0/0:17,0:20:12.04:0,12,461	0/0:15,0:15:21.07:0,21,911	0/0:20,0:25:36.59:0,37,1550	0/0:14,0:14:24.08:0,24,1044
chr10	51580266	.	GGT	G	690.21	PASS	AB=0.983;AC=28;AF=0.560;AN=50;BaseQRankSum=5.774;DP=605;FS=4.892;HRun=0;HaplotypeScore=82.4238;InbreedingCoeff=0.2339;MQ=65.19;MQ0=22;MQRankSum=2.539;QD=1.84;ReadPosRankSum=2.648;VQSLOD=1.0285;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:27:8.68:53,9,0	1/1:11,0:11:8.81:65,9,0	./.	./.	0/0:14,0:13:15:0,15,155	0/1:22,0:20:0.24:27,0,0	1/1:20,0:20:3.01:32,3,0	0/0:29,0:29:9.80:0,10,76	0/0:20,0:19:15.73:0,16,176	0/1:19,0:19:5.94:6,0,54	0/0:11,0:11:5.69:0,6,53	0/1:21,0:21:15.05:15,0,25	1/1:14,0:14:17.52:126,18,0	0/1:19,0:18:16.97:17,0,111	1/1:19,0:19:5.68:28,6,0	1/1:24,0:22:20.90:167,21,0	0/1:27,2:28:55.72:56,0,390	./.	0/0:27,0:27:5.95:0,6,42	1/1:11,0:10:3.89:33,4,0	0/1:42,1:43:19.13:19,0,202	1/1:13,0:12:8.69:57,9,0	1/1:13,0:13:0.79:19,1,0	1/1:27,0:27:10.91:118,11,0	0/1:17,1:18:8.30:8,0,228	0/0:20,0:19:8.99:0,9,100	0/1:25,0:24:8.14:8,0,230	0/0:9,0:9:9.02:0,9,106
chr10	51580312	.	TG	T	1086.55	PASS	AB=0.949;AC=18;AF=0.321;AN=56;BaseQRankSum=13.159;DP=602;FS=3.670;HRun=2;HaplotypeScore=84.2415;InbreedingCoeff=0.5037;MQ=55.09;MQ0=34;MQRankSum=1.430;QD=4.74;ReadPosRankSum=0.307;VQSLOD=0.6186;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:32,2:33:48.57:197,49,0	0/1:7,1:8:23.99:55,0,24	0/0:52,0:11:27.54:0,28,312	0/0:52,0:13:35.91:0,36,381	0/0:17,0:17:45.87:0,46,589	1/1:17,1:14:5.62:27,6,0	0/0:14,0:14:3.26:0,3,10	0/0:16,0:16:28.09:0,28,415	0/1:14,0:14:10.52:11,0,292	0/0:18,1:19:12.85:0,13,592	0/0:12,0:12:33.11:0,33,443	0/1:27,1:28:21.26:21,0,47	0/1:9,0:9:23.30:52,0,23	0/0:22,0:20:47.23:0,47,621	1/1:20,1:21:32.08:107,32,0	1/1:25,4:27:56.26:353,56,0	0/0:28,0:26:74.01:0,74,934	0/1:7,1:5:0.59:1,0,29	0/0:14,0:13:36.11:0,36,468	0/0:12,0:11:20.55:0,21,243	0/0:37,1:36:61.94:0,62,926	0/1:19,1:19:6.67:93,0,7	1/1:13,1:13:10.34:100,10,0	1/1:23,3:26:50.31:256,50,0	0/0:31,0:31:75.23:0,75,932	0/0:20,0:19:57.19:0,57,751	0/0:20,0:19:56.47:0,56,696	0/0:5,1:6:8.27:0,8,108
chr10	51580313	.	G	GGT	5005.12	PASS	AB=0.859;AC=21;AF=0.375;AN=56;BaseQRankSum=0.973;DP=605;FS=10.730;HRun=0;HaplotypeScore=81.9702;InbreedingCoeff=0.7150;MQ=57.22;MQ0=33;MQRankSum=0.123;QD=21.48;ReadPosRankSum=1.689;VQSLOD=4.7660;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:33,0:32:53.01:1043,53,0	0/1:9,0:9:19.35:130,0,19	0/0:52,0:11:4.59:0,5,242	0/0:54,0:15:31.77:0,32,292	0/0:18,0:18:41.96:0,42,496	1/1:15,2:14:21.07:321,21,0	1/1:5,9:14:0.47:1,0,0	0/0:14,0:14:27.09:0,27,340	0/0:12,0:14:18.06:0,18,224	0/0:19,0:19:42.13:0,42,528	0/0:12,0:12:30.09:0,30,371	0/1:8,21:30:31.52:44,0,32	1/1:10,0:10:12.01:142,12,0	0/0:21,0:19:41.65:0,42,511	1/1:22,0:22:42.14:640,42,0	1/1:28,0:27:65.95:888,66,0	0/0:28,0:26:59.91:0,60,693	1/1:8,1:5:9.03:122,9,0	0/0:14,0:13:29.99:0,30,350	0/0:11,0:11:15.05:0,15,188	0/0:36,0:37:53.88:0,54,653	0/1:20,0:19:1.42:460,0,1	1/1:14,0:13:33.06:472,33,0	1/1:24,0:25:51.16:741,51,0	0/0:31,0:31:69.14:0,69,809	0/0:20,0:19:45.13:0,45,552	0/0:19,0:19:38.83:0,39,470	0/0:5,0:5:2.66:0,3,37
chr10	51581815	.	TA	T	747.87	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.636;DP=562;FS=0.000;HRun=8;HaplotypeScore=63.5077;InbreedingCoeff=0.9142;MQ=74.57;MQ0=0;MQRankSum=-0.364;QD=18.70;ReadPosRankSum=-2.487;VQSLOD=2.8221;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:42.13:0,42,507	0/0:8,0:8:21.06:0,21,254	0/0:9,0:9:17.72:0,18,189	0/0:11,0:11:20.76:0,21,220	0/0:31,0:31:87.26:0,87,1039	1/1:3,22:25:57.09:550,57,0	1/1:1,14:15:33.05:319,33,0	0/0:32,0:32:81.24:0,81,969	0/0:24,0:24:63.19:0,63,761	0/0:22,0:22:63.17:0,63,747	0/0:20,0:20:57.11:0,57,670	0/0:17,0:17:48.15:0,48,580	0/0:18,0:18:48.15:0,48,579	0/0:16,0:16:48.15:0,48,580	0/0:22,0:22:60.18:0,60,725	0/0:21,0:21:57.17:0,57,688	0/0:29,0:29:84.26:0,84,1015	0/0:24,0:24:63.19:0,63,760	0/0:26,1:27:34.18:0,34,680	0/0:32,0:32:93.28:0,93,1121	0/0:18,0:18:51.14:0,51,604	0/0:11,0:11:33.08:0,33,384	0/0:16,0:16:48.13:0,48,568	0/0:21,0:21:63.19:0,63,761	0/0:13,1:14:4.12:0,4,333	0/0:22,0:22:66.19:0,66,785	0/0:37,0:37:93.29:0,93,1123	0/0:5,0:5:15.05:0,15,181
chr10	51585955	.	TGGGA	T	869.88	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=1.934;DP=413;FS=1.882;HRun=0;HaplotypeScore=74.3359;InbreedingCoeff=0.6839;MQ=79.78;MQ0=1;MQRankSum=-0.558;QD=15.00;ReadPosRankSum=-1.149;VQSLOD=2.6342;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:54.17:0,54,1232	0/0:7,0:7:18.06:0,18,423	0/0:23,0:21:27.06:0,27,466	0/0:24,0:23:38.78:0,39,672	0/0:12,0:12:30.08:0,30,681	1/1:4,16:20:33.11:554,33,0	1/1:9,13:22:5.81:416,6,0	0/1:16,0:16:19.58:20,0,418	0/0:12,0:12:18.05:0,18,378	0/0:22,0:22:48.16:0,48,1174	0/0:11,0:11:21.07:0,21,521	0/0:17,0:17:36.11:0,36,819	0/0:14,0:14:33.11:0,33,787	0/0:16,0:16:45.15:0,45,1045	0/0:6,0:6:12.04:0,12,252	0/0:18,0:18:30.09:0,30,697	0/0:13,0:13:30.10:0,30,716	0/0:11,0:11:18.06:0,18,437	0/0:10,0:10:27.05:0,27,585	0/0:14,0:14:30.10:0,30,744	0/0:16,0:16:39.12:0,39,914	0/0:6,0:6:9.03:0,9,223	0/0:14,0:14:27.06:0,27,568	0/0:17,0:17:48.16:0,48,1162	0/0:13,0:13:27.08:0,27,622	0/0:12,0:12:21.07:0,21,520	0/0:13,0:13:30.10:0,30,743	0/0:8,0:8:24.07:0,24,547
chr10	51587693	.	AT	A	298.53	PASS	AB=0.723;AC=2;AF=0.036;AN=56;BaseQRankSum=6.517;DP=569;FS=2.110;HRun=5;HaplotypeScore=54.9299;InbreedingCoeff=-0.0392;MQ=65.38;MQ0=0;MQRankSum=-4.266;QD=7.46;ReadPosRankSum=-0.595;VQSLOD=-0.4946;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:90.29:0,90,1213	0/0:6,0:6:18.06:0,18,246	0/0:9,0:9:19.62:0,20,268	0/0:9,0:9:10.91:0,11,194	0/0:26,0:26:75.23:0,75,995	0/1:8,9:17:99:253,0,276	0/1:17,6:23:99:134,0,627	0/0:30,0:30:81.26:0,81,1092	0/0:19,0:19:54.17:0,54,721	0/0:25,0:25:72.21:0,72,961	0/0:23,0:23:60.19:0,60,803	0/0:21,0:21:60.18:0,60,788	0/0:18,0:18:51.17:0,51,697	0/0:15,0:15:42.11:0,42,555	0/0:20,0:20:60.18:0,60,789	0/0:14,0:14:42.13:0,42,558	0/0:27,0:27:78.19:0,78,1025	0/0:26,0:26:75.21:0,75,1004	0/0:13,0:13:36.12:0,36,492	0/0:26,0:26:75.23:0,75,995	0/0:7,0:7:21.04:0,21,253	0/0:11,0:11:33.10:0,33,436	0/0:23,0:23:69.23:0,69,943	0/0:13,0:13:39.13:0,39,533	0/0:36,0:36:99:0,105,1389	0/0:20,0:20:57.18:0,57,765	0/0:30,0:30:90.29:0,90,1215	0/0:29,0:29:87.26:0,87,1170
chr10	51591681	.	TAGC	T	49.41	PASS	AB=1.000;AC=6;AF=0.130;AN=46;BaseQRankSum=-0.771;DP=479;FS=1.430;HRun=0;HaplotypeScore=83.0010;InbreedingCoeff=0.3577;MQ=54.56;MQ0=8;MQRankSum=0.600;QD=0.76;ReadPosRankSum=-1.698;VQSLOD=1.4488;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	0/0:6,0:6:4.75:0,5,61	0/0:16,0:9:11.94:0,12,118	0/0:28,0:11:0:0,0,0	./.	1/1:6,0:6:6.02:82,6,0	1/1:7,16:23:3.01:41,3,0	0/0:16,0:16:17.87:0,18,177	0/0:22,0:22:38.87:0,39,554	0/0:11,0:10:3.47:0,3,27	./.	0/0:32,0:32:62.96:0,63,700	0/0:28,0:28:38.96:0,39,471	0/1:32,0:32:20.72:21,0,905	0/0:26,0:26:48.01:0,48,500	0/0:14,0:14:28.96:0,29,306	0/0:42,0:42:90.11:0,90,1381	0/0:21,0:21:34.46:0,34,321	0/0:12,0:11:2.98:0,3,22	0/0:7,0:7:0:0,0,0	0/0:27,0:26:11.96:0,12,158	./.	./.	0/0:42,0:42:63.87:0,64,718	0/0:10,0:10:3.01:0,3,50	0/0:14,0:14:1.25:0,1,3	0/0:16,0:16:32.94:0,33,411	0/1:4,0:4:14.22:14,0,113
chr10	51591697	.	A	AGCA	4519.08	PASS	AB=1.000;AC=20;AF=0.400;AN=50;BaseQRankSum=8.269;DP=455;FS=0.000;HRun=0;HaplotypeScore=78.1687;InbreedingCoeff=0.7034;MQ=53.14;MQ0=9;MQRankSum=4.791;QD=18.91;ReadPosRankSum=1.065;VQSLOD=4.4693;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:8,0:8:0.04:0,0,0	1/1:10,0:10:8.80:74,9,0	0/0:18,0:11:11.98:0,12,104	0/1:27,0:9:0:0,0,0	./.	0/0:7,0:7:4.87:0,5,17	0/0:21,0:21:2.98:0,3,21	0/0:19,0:19:14.94:0,15,119	0/0:17,0:17:33.06:0,33,386	0/0:9,0:8:3.46:0,3,25	./.	1/1:25,6:32:60.03:896,60,0	1/1:27,0:27:54.08:839,54,0	0/0:31,0:31:68.51:0,69,794	1/1:24,0:24:51.08:735,51,0	1/1:12,0:12:17.72:183,18,0	0/0:37,0:37:53.72:0,54,874	1/1:22,0:22:43.90:605,44,0	0/1:11,0:10:0.10:0,0,0	0/1:7,0:7:0:0,0,0	0/0:20,0:19:12.01:0,12,131	0/1:5,0:5:0:0,0,0	./.	1/1:43,0:43:78.10:1186,78,0	0/0:10,0:10:3:0,3,25	0/1:11,0:10:0:0,0,0	0/0:14,0:14:27.01:0,27,286	0/0:4,0:4:9.48:0,9,106
chr10	51591712	.	A	AGC	1660.88	PASS	AB=0.827;AC=6;AF=0.107;AN=56;BaseQRankSum=10.994;DP=504;FS=2.087;HRun=0;HaplotypeScore=81.8049;InbreedingCoeff=-0.0014;MQ=58.40;MQ0=7;MQRankSum=1.672;QD=11.07;ReadPosRankSum=7.954;VQSLOD=2.6046;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:47.21:0,47,307	0/0:12,0:12:18.46:0,18,153	0/0:21,0:13:30.06:0,30,429	0/0:29,0:11:33.03:0,33,412	0/0:9,0:9:27.08:0,27,369	0/0:11,0:11:33.07:0,33,413	0/0:23,0:23:21.07:0,21,290	0/0:27,0:25:69.22:0,69,996	0/0:14,0:14:42.13:0,42,645	0/0:10,0:9:24.06:0,24,327	0/0:11,0:11:30.04:0,30,381	0/1:20,11:31:2.35:397,0,2	0/1:23,4:27:75.53:306,0,76	0/0:30,0:30:87.27:0,87,1327	0/1:16,6:22:30.02:350,0,30	0/1:12,1:13:29.87:30,0,54	0/0:33,0:33:70.30:0,70,1393	0/1:16,4:20:28.54:219,0,29	0/0:11,0:11:33.04:0,33,415	0/0:11,0:11:24.98:0,25,309	0/0:18,0:18:42.56:0,43,582	0/0:10,0:10:16.12:0,16,100	0/0:10,0:10:17.68:0,18,109	0/1:28,9:37:93.35:483,0,93	0/0:13,0:13:30.99:0,31,402	0/0:16,0:15:42.12:0,42,575	0/0:12,0:12:36.09:0,36,516	0/0:5,0:5:15.05:0,15,228
chr10	51591713	.	A	AG	694.85	PASS	AB=0.856;AC=7;AF=0.125;AN=56;BaseQRankSum=10.407;DP=503;FS=1.587;HRun=0;HaplotypeScore=73.4653;InbreedingCoeff=-0.1448;MQ=59.55;MQ0=7;MQRankSum=1.899;QD=4.32;ReadPosRankSum=7.716;VQSLOD=2.6301;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:18,0:18:30.37:30,0,153	0/0:12,0:12:30.05:0,30,160	0/0:21,0:13:33.10:0,33,445	0/0:30,0:12:32.95:0,33,397	0/0:10,0:10:27.07:0,27,356	0/0:11,0:11:33.09:0,33,423	0/0:23,0:23:27.03:0,27,333	0/0:26,0:24:69.22:0,69,936	0/0:13,0:13:39.13:0,39,545	0/0:9,0:8:21.07:0,21,290	0/0:11,0:11:33:0,33,390	0/1:18,11:30:79.30:173,0,79	0/1:22,4:26:88.61:120,0,89	0/0:30,0:30:87.28:0,87,1187	0/1:16,6:22:66.71:130,0,67	0/0:11,0:12:24.08:0,24,127	0/0:34,0:34:92.89:0,93,1249	0/1:14,4:18:51.82:74,0,52	0/0:11,0:11:33.07:0,33,419	0/0:11,0:11:24.95:0,25,298	0/0:18,0:18:39.52:0,40,520	0/0:11,0:11:15.09:0,15,66	0/1:10,0:10:46.86:52,0,47	0/1:28,9:37:99:246,0,115	0/0:13,0:13:30.96:0,31,380	0/0:17,0:16:45.11:0,45,580	0/0:14,0:14:36.12:0,36,499	0/0:5,0:5:15.05:0,15,203
chr10	51591844	.	GAAAC	G	7489.41	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=14.231;DP=648;FS=4.977;HRun=0;HaplotypeScore=109.0314;InbreedingCoeff=0.9941;MQ=77.10;MQ0=1;MQRankSum=-1.714;QD=32.14;ReadPosRankSum=4.636;VQSLOD=4.7679;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,30:35:69.24:1137,69,0	1/1:1,5:6:12.04:200,12,0	0/0:41,0:37:35.96:0,36,656	0/0:25,0:24:35.64:0,36,692	0/0:17,0:17:45.15:0,45,1020	0/0:18,0:18:51.18:0,51,1229	0/0:29,0:29:75.24:0,75,1664	0/0:28,0:27:42.12:0,42,897	0/0:11,0:11:27.09:0,27,658	0/0:25,0:25:63.13:0,63,1379	0/0:13,0:13:30.10:0,30,654	1/1:5,29:34:84.28:1380,84,0	1/1:5,24:29:54.18:899,54,0	0/0:33,0:33:72.23:0,72,1613	1/1:4,21:25:48.16:799,48,0	1/1:3,22:25:44.99:749,45,0	0/0:30,0:30:72.22:0,72,1667	1/1:8,17:25:22.08:694,22,0	0/0:21,0:20:39.12:0,39,767	0/0:16,0:16:45.15:0,45,1073	0/0:19,0:19:54.19:0,54,1249	1/1:3,11:14:27.09:432,27,0	1/1:3,13:16:30.10:499,30,0	1/1:7,17:24:42.14:699,42,0	0/0:17,0:17:42.14:0,42,985	0/0:25,0:25:63.22:0,63,1522	0/0:29,0:29:69.22:0,69,1572	0/0:16,0:16:24.08:0,24,534
chr10	51593976	.	GTA	G	293.37	PASS	AB=0.863;AC=10;AF=0.263;AN=38;BaseQRankSum=3.209;DP=256;FS=0.951;HRun=0;HaplotypeScore=41.1850;InbreedingCoeff=-0.2245;MQ=88.10;MQ0=2;MQRankSum=-0.866;QD=2.29;ReadPosRankSum=-0.289;VQSLOD=1.4319;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:2,0:2:3:0,3,27	0/0:16,0:14:9.01:0,9,90	0/0:16,0:8:3.01:0,3,31	0/1:7,0:9:2.30:2,0,96	0/0:7,0:7:1.82:0,2,5	./.	0/1:31,6:39:99:150,0,567	0/0:3,0:4:9.03:0,9,142	0/1:7,2:9:38.34:61,0,38	0/1:4,2:6:23.30:23,0,128	./.	./.	0/0:5,0:5:6.02:0,6,95	0/0:3,0:3:0:0,0,0	./.	0/1:22,3:27:59.93:60,0,647	1/1:12,0:12:3.28:17,3,0	0/1:11,1:12:45.83:46,0,192	./.	0/0:3,0:3:3.01:0,3,46	./.	./.	./.	0/1:6,1:7:20.27:20,0,155	0/1:7,0:7:25.08:25,0,86	0/0:5,0:5:3.01:0,3,47	0/0:8,0:9:21.04:0,21,304
chr10	51593999	.	TAC	T	86.35	PASS	AB=1.000;AC=9;AF=0.188;AN=48;BaseQRankSum=5.269;DP=188;FS=4.113;HRun=0;HaplotypeScore=33.0739;InbreedingCoeff=0.1581;MQ=64.97;MQ0=5;MQRankSum=0.060;QD=2.47;ReadPosRankSum=0.430;VQSLOD=1.0556;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:10,0:10:2.99:24,3,0	0/0:1,0:1:3.01:0,3,51	0/0:8,0:5:4.40:0,4,29	0/0:13,0:1:2.99:0,3,23	0/0:5,0:5:1.11:0,1,82	1/1:2,2:4:5.74:37,6,0	./.	0/0:39,1:40:17.36:0,17,812	0/0:4,0:4:9.03:0,9,173	0/1:5,0:5:21.83:22,0,95	0/0:7,0:7:7.25:0,7,172	./.	./.	0/0:3,0:3:6.02:0,6,98	1/1:1,0:1:3:25,3,0	./.	0/0:26,0:26:36.67:0,37,874	0/1:12,0:12:92.39:92,0,101	0/0:15,0:13:16.85:0,17,308	0/0:2,0:2:3:0,3,25	0/0:1,0:1:3:0,3,25	0/0:2,0:2:5.99:0,6,48	0/0:1,0:1:2.99:0,3,24	0/0:1,0:1:2.99:0,3,24	0/0:7,0:7:11.20:0,11,238	0/1:3,0:3:5.30:5,0,107	0/0:1,0:1:3.01:0,3,58	0/0:10,0:10:29.91:0,30,475
chr10	51594125	.	A	AAT	866.55	PASS	AC=6;AF=0.111;AN=54;BaseQRankSum=6.820;DP=314;FS=4.159;HRun=0;HaplotypeScore=40.8459;InbreedingCoeff=0.7840;MQ=66.30;MQ0=1;MQRankSum=1.037;QD=25.49;ReadPosRankSum=1.973;VQSLOD=4.0496;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:63.17:0,63,767	0/0:2,0:2:6.02:0,6,76	1/1:6,0:5:0.89:2,1,0	./.	0/0:13,0:13:39.10:0,39,458	1/1:3,15:18:42.14:685,42,0	1/1:2,8:10:18.06:299,18,0	0/0:36,0:35:78.06:0,78,931	0/0:6,0:6:18.06:0,18,227	0/0:10,0:10:27.09:0,27,341	0/0:10,0:10:27.09:0,27,340	0/0:5,0:5:12.04:0,12,151	0/0:8,0:8:24.08:0,24,302	0/0:4,0:4:12.04:0,12,151	0/0:8,0:8:24.05:0,24,276	0/0:11,0:11:29.50:0,29,360	0/0:27,0:27:60.18:0,60,744	0/0:13,0:12:30.10:0,30,378	0/0:12,0:12:24.08:0,24,303	0/0:8,0:8:24.08:0,24,303	0/0:4,0:4:12.04:0,12,151	0/0:2,0:2:3.01:0,3,38	0/0:7,0:7:21.05:0,21,252	0/0:5,0:5:15.05:0,15,189	0/0:8,0:8:24.07:0,24,292	0/0:15,0:15:36.09:0,36,422	0/0:10,0:9:27.07:0,27,327	0/0:30,0:30:90.26:0,90,1108
chr10	51595291	.	GT	G	11279.21	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=14.823;DP=798;FS=4.387;HRun=1;HaplotypeScore=78.9623;InbreedingCoeff=0.9998;MQ=85.25;MQ0=0;MQRankSum=-2.238;QD=38.89;ReadPosRankSum=3.249;VQSLOD=5.6366;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,35:35:99:1466,105,0	1/1:0,10:10:27.09:377,27,0	0/0:21,0:21:63.16:0,63,913	0/0:28,0:28:68.99:0,69,1052	0/0:31,0:31:93.32:0,93,1486	0/0:25,0:25:75.26:0,75,1192	0/0:36,0:36:99:0,108,1662	0/0:33,0:33:96.32:0,96,1506	0/0:32,0:32:96.33:0,96,1535	0/0:25,0:25:69.24:0,69,1103	0/0:29,0:29:84.28:0,84,1321	1/1:0,34:34:99:1383,99,0	1/1:0,39:39:99:1552,111,0	0/0:34,0:34:99:0,102,1618	1/1:0,47:47:99:1719,123,0	1/1:0,38:38:99:1384,99,0	0/0:32,0:32:96.31:0,96,1498	1/1:0,15:15:39.13:546,39,0	0/0:20,0:20:60.17:0,60,899	0/0:26,0:26:78.27:0,78,1247	0/0:27,0:27:81.25:0,81,1269	1/1:0,19:19:51.17:712,51,0	1/1:0,25:25:69.23:965,69,0	1/1:0,28:28:84.28:1175,84,0	0/0:30,0:30:90.31:0,90,1438	0/0:29,0:29:87.28:0,87,1350	0/0:32,0:32:90.29:0,90,1408	0/0:18,0:18:54.18:0,54,863
chr10	51595663	.	AT	A	4855.79	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=13.471;DP=611;FS=1.076;HRun=9;HaplotypeScore=61.0658;InbreedingCoeff=0.9929;MQ=73.46;MQ0=0;MQRankSum=-1.292;QD=21.11;ReadPosRankSum=5.072;VQSLOD=5.3530;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,26:31:43.30:554,43,0	1/1:2,12:14:33.01:302,33,0	0/0:11,0:12:27.07:0,27,300	0/0:6,0:6:12.03:0,12,124	0/0:35,0:35:96.25:0,96,1073	0/0:20,0:20:48.11:0,48,528	0/0:14,0:14:30.09:0,30,346	0/0:30,0:30:84.20:0,84,921	0/0:11,0:11:24.06:0,24,266	0/0:20,0:20:42.12:0,42,485	0/0:21,0:21:63.06:0,63,688	1/1:4,29:33:81.03:741,81,0	1/1:4,15:19:42.02:384,42,0	0/0:24,0:24:60.16:0,60,681	1/1:4,27:31:72.04:659,72,0	1/1:2,18:20:38.92:357,39,0	0/0:27,0:27:78.23:0,78,900	1/1:2,19:21:54.03:494,54,0	0/0:17,1:18:20.65:0,21,474	0/0:31,0:32:90.12:0,90,1008	0/0:7,0:8:20.88:0,21,214	1/1:0,23:23:62.99:568,63,0	1/1:2,17:19:42.01:384,42,0	1/1:0,19:19:45.02:412,45,0	0/0:34,0:34:93.27:0,93,1066	0/0:23,0:23:63.16:0,63,703	0/0:39,0:38:99:0,114,1291	0/0:7,0:7:21.05:0,21,231
chr10	51596141	.	AC	A	647.45	PASS	AB=0.745;AC=9;AF=0.161;AN=56;BaseQRankSum=13.958;DP=739;FS=8.837;HRun=1;HaplotypeScore=170.7343;InbreedingCoeff=-0.1932;MQ=52.39;MQ0=9;MQRankSum=-10.501;QD=3.01;ReadPosRankSum=6.743;VQSLOD=-0.5506;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,1:20:10.08:0,10,215	0/1:5,4:9:36.48:36,0,95	0/0:31,0:12:35.68:0,36,467	0/0:25,1:11:24.08:0,24,366	0/0:36,0:36:99:0,105,1611	0/0:24,0:24:69.23:0,69,1055	0/0:31,0:29:82.50:0,82,1202	0/0:34,0:33:93.32:0,93,1458	0/0:25,0:25:75.26:0,75,1191	0/0:29,0:29:87.22:0,87,1279	0/0:23,0:23:66.19:0,66,1001	0/1:12,7:19:63.61:64,0,197	0/1:21,9:30:66.50:66,0,355	0/0:36,0:36:99:0,102,1560	0/1:25,12:37:99:130,0,456	0/1:13,11:25:99:143,0,194	0/0:27,0:26:75.25:0,75,1177	0/1:15,4:19:65.84:66,0,166	0/0:18,0:18:51.17:0,51,806	0/0:28,0:28:81.22:0,81,1206	0/0:20,0:20:60.20:0,60,945	0/1:25,14:39:99:162,0,336	0/1:14,10:24:99:104,0,131	0/1:10,3:13:15.75:16,0,103	0/0:26,0:26:69.67:0,70,1135	0/0:36,0:36:99:0,108,1639	0/0:41,0:41:99:0,123,1916	0/0:12,0:12:36.12:0,36,574
chr10	51596143	.	AACAAG	A	3438.89	PASS	AB=0.770;AC=10;AF=0.179;AN=56;BaseQRankSum=15.574;DP=736;FS=1.604;HRun=0;HaplotypeScore=216.2342;InbreedingCoeff=-0.2164;MQ=52.41;MQ0=8;MQRankSum=-11.227;QD=14.39;ReadPosRankSum=5.571;VQSLOD=3.1321;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:20,1:20:15.69:16,0,195	0/1:5,4:9:29.23:170,0,29	0/0:33,0:14:42.10:0,42,868	0/0:29,0:14:35.91:0,36,701	0/0:35,0:35:99:0,102,2811	0/0:24,0:24:68.97:0,69,1545	0/0:31,0:29:81.20:0,81,1914	0/0:32,0:32:93.30:0,93,2285	0/0:25,0:25:72.25:0,72,2093	0/0:27,0:27:78.26:0,78,2143	0/0:21,0:21:60.21:0,60,1671	0/1:12,7:19:70.30:333,0,70	0/1:22,9:31:99:462,0,102	0/0:36,0:36:99:0,102,2770	0/1:24,12:36:99:527,0,223	0/1:16,11:27:99:484,0,104	0/0:28,0:27:78.27:0,78,2195	0/1:15,4:19:34.98:353,0,35	0/0:18,0:18:54.18:0,54,1459	0/0:26,0:26:72.16:0,72,1991	0/0:20,0:20:57.19:0,57,1696	0/1:25,14:39:99:598,0,220	0/1:14,10:24:99:424,0,119	0/1:11,3:14:71.03:71,0,85	0/0:26,0:26:75.22:0,75,2001	0/0:34,0:34:99:0,102,2752	0/0:40,0:40:99:0,120,3423	0/0:12,0:12:36.12:0,36,1063
chr10	51596163	.	CAA	C	6455.03	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=18.434;DP=715;FS=10.520;HRun=8;HaplotypeScore=158.8094;InbreedingCoeff=0.9995;MQ=58.46;MQ0=1;MQRankSum=-15.961;QD=27.70;ReadPosRankSum=3.199;VQSLOD=3.3271;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,16:19:33.02:401,33,0	1/1:0,11:11:30.09:365,30,0	0/0:32,0:23:54.17:0,54,834	0/0:29,0:24:50.65:0,51,842	0/0:34,0:35:87.28:0,87,1408	0/0:25,0:25:75.22:0,75,1217	0/0:27,0:28:81.25:0,81,1306	0/0:34,0:34:96.31:0,96,1555	0/0:21,0:21:60.20:0,60,992	0/0:24,0:24:72.21:0,72,1124	0/0:23,0:23:57.17:0,57,877	1/1:3,15:18:39.12:475,39,0	1/1:3,29:32:81.25:986,81,0	0/0:28,0:28:78.26:0,78,1285	1/1:2,27:29:69.21:840,69,0	1/1:1,22:23:66.21:804,66,0	0/0:30,0:30:84.28:0,84,1376	1/1:3,16:19:31.72:400,32,0	0/0:20,0:20:54.18:0,54,894	0/0:23,0:24:59.67:0,60,915	0/0:19,0:20:54.18:0,54,888	1/1:6,33:39:96.20:1164,96,0	1/1:1,25:26:60.19:730,60,0	1/1:3,13:16:24.07:289,24,0	0/0:28,0:28:72.25:0,72,1197	0/0:33,0:33:90.29:0,90,1441	0/0:32,0:32:84.28:0,84,1385	0/0:16,0:16:48.06:0,48,713
chr10	51596546	.	GGCT	G	8968.10	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=18.580;DP=574;FS=8.941;HRun=0;HaplotypeScore=122.4663;InbreedingCoeff=0.9989;MQ=85.53;MQ0=0;MQRankSum=-9.877;QD=39.33;ReadPosRankSum=6.167;VQSLOD=5.7937;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,23:30:89.53:1118,90,0	1/1:1,10:11:33.09:477,33,0	0/0:29,0:29:61.14:0,61,1692	0/0:25,0:25:75.26:0,75,1677	0/0:23,0:23:63.22:0,63,1502	1/1:0,20:21:63.21:866,63,0	1/1:0,17:23:45.15:605,45,0	0/0:26,0:26:78.27:0,78,1826	0/0:16,0:16:48.16:0,48,1121	0/0:23,0:23:66.23:0,66,1586	0/0:11,0:11:30.09:0,30,677	1/1:2,11:13:33.51:492,34,0	1/1:4,10:14:41.45:526,41,0	0/0:24,1:25:28.88:0,29,1698	1/1:1,16:17:51.17:746,51,0	1/1:2,18:20:59.55:830,60,0	0/0:38,0:38:99:0,111,2572	1/1:0,22:22:66.22:1016,66,0	0/0:22,0:22:63.20:0,63,1395	0/0:19,0:19:54.19:0,54,1289	0/0:19,0:19:57.20:0,57,1323	1/1:1,16:17:48.16:692,48,0	1/1:3,6:9:24.05:300,24,0	1/1:4,27:31:89.48:1300,89,0	0/0:19,0:19:57.20:0,57,1356	0/0:26,0:26:75.26:0,75,1808	0/0:18,0:18:54.17:0,54,1186	0/0:7,0:7:21.07:0,21,500
chr10	51596555	.	CA	C	5938.85	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=18.377;DP=579;FS=29.768;HRun=1;HaplotypeScore=111.8735;InbreedingCoeff=0.9984;MQ=89.42;MQ0=0;MQRankSum=-7.922;QD=25.27;ReadPosRankSum=6.040;VQSLOD=3.1326;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,23:35:73.62:716,74,0	1/1:0,10:10:30.06:311,30,0	0/0:31,0:31:79.19:0,79,1033	0/0:31,0:31:76.92:0,77,1008	0/0:25,0:25:54.53:0,55,812	1/1:3,20:23:62.23:558,62,0	1/1:6,17:23:47.95:410,48,0	0/0:21,0:21:49.67:0,50,643	0/0:15,0:15:42.09:0,42,567	0/0:22,0:22:59.57:0,60,790	0/0:11,0:11:32.88:0,33,377	1/1:3,11:14:18.33:334,18,0	1/1:2,10:12:35.82:335,36,0	0/0:24,1:25:42.85:0,43,951	1/1:2,16:18:54.04:521,54,0	1/1:2,18:20:53.23:562,53,0	0/0:34,0:34:96.31:0,96,1356	1/1:0,22:22:66.15:706,66,0	0/0:20,0:20:49:0,49,645	0/0:20,0:20:46.94:0,47,596	0/0:19,0:19:26.20:0,26,533	1/1:3,15:18:48.02:463,48,0	1/1:6,6:12:26.26:210,26,0	1/1:1,27:28:80.89:812,81,0	0/0:21,0:21:46.87:0,47,702	0/0:23,0:23:30.93:0,31,717	0/0:15,0:15:45.14:0,45,612	0/0:11,0:11:33.06:0,33,414
chr10	51596633	.	C	CTTT	3719.70	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=10.896;DP=492;FS=0.386;HRun=10;HaplotypeScore=94.4897;InbreedingCoeff=0.9746;MQ=74.92;MQ0=0;MQRankSum=-2.149;QD=17.97;ReadPosRankSum=0.198;VQSLOD=1.7243;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:45:68.66:705,69,0	1/1:2,0:4:5.98:46,6,0	0/0:11,0:11:13.42:0,13,166	0/0:10,0:10:12.43:0,12,123	0/0:26,0:26:66.60:0,67,791	1/1:6,6:13:18.04:293,18,0	1/1:3,11:16:33.10:579,33,0	0/0:28,0:28:57.08:0,57,669	0/0:17,0:17:48.12:0,48,569	0/0:12,0:13:33.03:0,33,379	0/0:17,0:18:46.37:0,46,562	1/1:6,0:14:34.01:273,34,0	1/1:3,0:14:29.87:227,30,0	0/0:17,0:18:16.14:0,16,399	1/1:5,0:16:29.89:229,30,0	1/1:4,0:20:24.56:262,25,0	0/0:24,0:24:69.13:0,69,820	1/1:5,0:20:34.14:258,34,0	0/0:17,0:17:36.05:0,36,437	0/0:16,0:16:39.09:0,39,474	0/0:15,0:15:36.04:0,36,425	1/1:2,0:15:37.43:282,37,0	1/1:1,0:14:32.38:235,32,0	1/1:2,1:16:38.87:333,39,0	0/0:16,0:17:48.01:0,48,525	0/0:17,0:17:42.08:0,42,511	0/0:20,0:20:54.14:0,54,657	0/0:17,0:17:45.09:0,45,535
chr10	51597044	.	GAA	G	5039.22	PASS	AB=0.571;AC=19;AF=0.339;AN=56;BaseQRankSum=10.056;DP=553;FS=4.331;HRun=10;HaplotypeScore=71.0329;InbreedingCoeff=0.9290;MQ=75.37;MQ0=0;MQRankSum=0.406;QD=24.95;ReadPosRankSum=6.234;VQSLOD=4.5700;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:0,33:33:78.21:870,78,0	1/1:0,9:9:24.06:267,24,0	0/0:15,0:15:23.43:0,23,306	0/0:15,0:15:26.95:0,27,338	0/0:24,0:27:72.18:0,72,1055	0/0:26,0:28:77.11:0,77,1085	0/0:13,0:13:36.12:0,36,567	0/0:24,0:25:59.66:0,60,852	0/0:17,0:19:43.97:0,44,591	0/0:17,0:17:48:0,48,645	0/0:18,0:18:45.14:0,45,694	1/1:7,10:17:36.08:391,36,0	1/1:1,22:23:57.15:635,57,0	0/0:24,0:24:63.15:0,63,865	1/1:0,21:21:54.15:602,54,0	1/1:1,16:17:39.10:435,39,0	0/0:27,0:28:68.67:0,69,967	0/1:5,15:20:8.52:360,0,9	0/0:14,0:15:38.61:0,39,563	0/0:25,0:25:63.10:0,63,947	0/0:12,0:12:24.08:0,24,379	1/1:2,14:17:29.93:376,30,0	1/1:1,22:23:60.16:669,60,0	1/1:4,18:22:39.10:435,39,0	0/0:17,0:19:53.60:0,54,717	0/0:24,0:24:63.20:0,63,956	0/0:13,0:14:38.61:0,39,558	0/0:12,0:12:33.06:0,33,452
chr10	51597780	.	TTCC	T	3880.60	PASS	AB=0.589;AC=15;AF=0.268;AN=56;BaseQRankSum=6.020;DP=519;FS=28.250;HRun=0;HaplotypeScore=82.1335;InbreedingCoeff=0.6215;MQ=49.78;MQ0=2;MQRankSum=-5.691;QD=19.31;ReadPosRankSum=2.341;VQSLOD=1.7642;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:14,21:35:47.05:731,47,0	0/1:4,6:9:3.96:137,0,4	0/0:18,0:11:18.02:0,18,285	0/0:22,0:13:13.95:0,14,270	0/0:9,0:9:15.04:0,15,207	0/0:6,0:6:14.70:0,15,205	0/0:18,0:18:39.13:0,39,718	0/0:32,0:32:59.95:0,60,986	0/0:17,0:17:38.99:0,39,657	0/0:11,0:11:24.04:0,24,408	0/0:14,0:14:24.93:0,25,427	0/1:11,22:33:8.28:502,0,8	1/1:5,15:20:24.18:518,24,0	0/0:22,0:22:41.64:0,42,663	1/1:13,15:28:11.19:687,11,0	0/1:7,14:21:20.83:321,0,21	0/0:14,0:14:27.09:0,27,510	0/1:2,11:13:22.22:285,0,22	0/0:21,0:21:45.02:0,45,744	0/0:13,0:13:35.90:0,36,514	0/0:36,0:36:66.08:0,66,1059	0/1:4,11:15:0.07:295,0,0	1/1:2,7:9:14.90:163,15,0	1/1:3,14:17:21.02:242,21,0	0/0:20,0:20:44.76:0,45,622	0/0:14,0:14:33.11:0,33,620	0/0:15,0:15:33.10:0,33,554	0/0:15,0:15:36.05:0,36,640
chr10	51599741	.	GAA	G	6923.18	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=17.503;DP=613;FS=32.212;HRun=3;HaplotypeScore=125.5875;InbreedingCoeff=0.9350;MQ=54.35;MQ0=3;MQRankSum=-9.770;QD=35.69;ReadPosRankSum=2.982;VQSLOD=3.0856;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,33:34:87.10:1304,87,0	1/1:0,10:10:24.08:367,24,0	0/0:18,0:9:27.09:0,27,464	0/0:35,0:23:63.15:0,63,1069	0/0:19,0:19:54.19:0,54,1043	0/0:20,0:20:57.19:0,57,1070	0/0:32,0:32:96.29:0,96,1802	0/0:27,0:27:81.28:0,81,1565	0/0:15,0:15:45.11:0,45,831	0/0:28,0:28:84.27:0,84,1561	0/0:15,0:15:45.15:0,45,825	1/1:0,25:25:69.23:1054,69,0	1/1:3,19:21:54.17:804,54,0	0/0:24,0:24:69.24:0,69,1333	1/1:1,23:24:60.20:917,60,0	1/1:0,25:25:69.22:1033,69,0	0/0:37,0:37:99:0,111,2136	1/1:4,11:15:0.40:418,0,0	0/0:18,0:16:48.14:0,48,872	0/0:17,0:17:51.17:0,51,985	0/0:42,0:42:99:0,126,2322	1/1:0,16:16:39.13:595,39,0	1/1:0,5:5:3.01:46,3,0	1/1:0,18:18:26.63:386,27,0	0/0:22,0:22:66.18:0,66,1237	0/0:22,0:22:66.23:0,66,1275	0/0:18,0:18:54.18:0,54,1000	0/0:10,0:10:30.10:0,30,579
chr10	51599774	.	G	GC	8857.43	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=3.129;DP=666;FS=33.865;HRun=0;HaplotypeScore=109.7118;InbreedingCoeff=0.9962;MQ=60.69;MQ0=0;MQRankSum=-6.914;QD=36.30;ReadPosRankSum=-1.141;VQSLOD=2.3160;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,46:48:99:1722,111,0	1/1:0,6:6:18.06:287,18,0	0/0:24,0:18:48.11:0,48,619	0/0:21,0:17:48.15:0,48,655	0/0:18,0:18:54.18:0,54,755	0/0:20,0:20:60.20:0,60,837	0/0:36,0:36:99:0,108,1489	0/0:17,0:17:48.16:0,48,671	0/0:21,0:21:63.21:0,63,881	0/0:25,0:25:75.25:0,75,1049	0/0:28,0:28:84.28:0,84,1173	1/1:0,35:35:96.33:1532,96,0	1/1:0,23:22:63.21:968,63,0	0/0:27,0:27:81.26:0,81,1110	1/1:1,26:27:60.20:944,60,0	1/1:2,33:35:90.29:1394,90,0	0/0:36,0:36:99:0,105,1466	1/1:2,19:21:51.15:789,51,0	0/0:17,0:17:48.14:0,48,638	0/0:18,0:18:44.98:0,45,612	0/0:42,0:42:99:0,126,1743	1/1:1,18:19:39.13:622,39,0	1/1:0,11:11:15.05:211,15,0	1/1:1,18:19:27.05:388,27,0	0/0:25,0:25:72.24:0,72,995	0/0:23,0:23:69.22:0,69,950	0/0:14,0:14:42.14:0,42,586	0/0:10,0:10:30.07:0,30,399
chr10	51600439	.	G	GA	3550.14	PASS	AB=0.771;AC=20;AF=0.357;AN=56;BaseQRankSum=-8.922;DP=615;FS=0.858;HRun=9;HaplotypeScore=48.2922;InbreedingCoeff=0.7905;MQ=60.46;MQ0=11;MQRankSum=2.597;QD=14.49;ReadPosRankSum=2.427;VQSLOD=3.3898;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,36:38:33.09:365,33,0	1/1:2,10:12:24.06:266,24,0	0/1:17,2:7:4.74:5,0,39	0/0:18,0:4:4.95:0,5,26	0/0:28,0:30:67.04:0,67,556	0/0:26,0:24:50.97:0,51,438	0/0:19,0:19:20.98:0,21,179	0/0:25,0:23:53.91:0,54,459	0/0:26,0:25:59.96:0,60,517	0/0:26,0:26:68.85:0,69,584	0/0:16,0:17:43.71:0,44,355	1/1:9,15:23:29.95:310,30,0	0/1:8,11:21:3.10:217,0,3	0/0:21,0:21:50.99:0,51,443	1/1:4,20:24:42.11:465,42,0	1/1:7,23:30:1.42:448,1,0	0/0:18,0:19:20.98:0,21,178	1/1:2,12:14:8.93:72,9,0	0/0:12,0:13:31.05:0,31,243	0/0:25,0:25:65:0,65,547	0/0:14,0:13:3:0,3,26	1/1:4,16:21:47.96:512,48,0	1/1:4,28:33:32.14:811,32,0	1/1:4,4:9:8.86:81,9,0	0/0:19,0:20:52.99:0,53,443	0/0:29,0:31:75.40:0,75,612	0/0:25,0:23:71.92:0,72,610	0/0:12,0:11:14.98:0,15,130
chr10	51601796	.	G	GAA	4477.24	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=7.336;DP=480;FS=8.561;HRun=1;HaplotypeScore=78.0437;InbreedingCoeff=0.8849;MQ=52.88;MQ0=30;MQRankSum=0.291;QD=25.44;ReadPosRankSum=0.900;VQSLOD=2.9784;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,1:19:24.68:351,25,0	1/1:2,1:3:9.01:109,9,0	0/0:23,0:8:20.90:0,21,229	0/1:27,0:8:1.79:2,0,49	0/0:22,0:21:45.05:0,45,565	0/0:17,0:17:51.08:0,51,679	0/0:10,0:10:30.08:0,30,439	0/0:22,0:19:54.09:0,54,737	0/0:15,0:14:42.08:0,42,554	0/0:18,0:14:39.07:0,39,487	0/0:18,0:14:33.56:0,34,476	1/1:14,4:17:30.76:544,31,0	1/1:7,7:13:27.30:546,27,0	0/0:19,0:17:38.09:0,38,553	1/1:10,4:13:7.81:351,8,0	1/1:11,7:18:48.06:721,48,0	0/0:15,0:12:36.11:0,36,545	1/1:8,4:12:7.87:432,8,0	0/0:15,0:12:36.02:0,36,433	0/0:17,0:14:33.63:0,34,426	0/0:30,0:26:72.13:0,72,925	1/1:8,4:12:21.47:403,21,0	1/1:11,7:17:41.91:539,42,0	1/1:7,10:18:1.08:480,1,0	0/0:14,0:14:39.10:0,39,578	0/0:19,0:19:45.59:0,46,659	0/0:22,0:21:54.07:0,54,678	0/0:8,0:6:18:0,18,195
chr10	51601817	.	A	AG	3147.23	PASS	AB=0.560;AC=19;AF=0.339;AN=56;BaseQRankSum=13.003;DP=468;FS=7.481;HRun=7;HaplotypeScore=72.2692;InbreedingCoeff=0.9287;MQ=65.60;MQ0=16;MQRankSum=-1.148;QD=19.79;ReadPosRankSum=3.506;VQSLOD=3.0862;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,15:24:27.04:304,27,0	1/1:1,5:5:9.03:109,9,0	0/0:17,0:11:30.02:0,30,278	0/0:22,0:12:29.99:0,30,272	0/0:20,0:19:42:0,42,404	0/0:23,0:23:53.94:0,54,501	0/0:11,0:11:33.03:0,33,311	0/0:27,0:27:48.01:0,48,449	0/0:9,0:9:21.03:0,21,203	0/0:17,0:15:30.04:0,30,286	0/0:10,0:8:18.02:0,18,173	1/1:3,17:20:39.11:461,39,0	1/1:6,10:15:42.12:492,42,0	0/0:23,0:21:59.93:0,60,564	1/1:5,12:15:30.08:352,30,0	1/1:3,15:18:33.10:398,33,0	0/0:16,0:15:36.04:0,36,341	1/1:3,10:13:21.02:237,21,0	0/0:15,0:13:30.05:0,30,289	0/0:12,0:12:29.75:0,30,260	0/0:22,0:21:42.05:0,42,405	1/1:1,11:12:28.64:330,29,0	1/1:7,12:18:39.10:449,39,0	0/1:3,11:13:4.50:229,0,5	0/0:11,0:11:24.03:0,24,232	0/0:18,0:18:48.03:0,48,453	0/0:26,0:26:74.98:0,75,704	0/0:10,0:9:24.04:0,24,231
chr10	51605851	.	GGCGCGCGCGCGC	G	4508.85	PASS	AB=1.000;AC=21;AF=0.389;AN=54;BaseQRankSum=10.209;DP=482;FS=8.239;HRun=0;HaplotypeScore=166.3706;InbreedingCoeff=0.8220;MQ=70.20;MQ0=1;MQRankSum=-10.172;QD=27.33;ReadPosRankSum=1.654;VQSLOD=3.8024;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:18:18.06:597,18,0	1/1:3,3:6:3.01:107,3,0	./.	0/1:12,0:11:32.74:37,0,33	0/0:27,0:27:54:0,54,1827	0/0:20,0:20:42.10:0,42,1709	0/0:27,0:27:63.22:0,63,2817	0/0:29,0:28:29.01:0,29,887	0/0:13,0:13:30.10:0,30,1232	0/0:14,0:14:27.06:0,27,945	0/0:10,0:10:15.04:0,15,582	1/1:22,0:22:21.07:634,21,0	1/1:14,0:14:15.05:486,15,0	0/0:22,0:22:42.14:0,42,1669	1/1:27,0:27:27.09:857,27,0	1/1:20,0:20:30.10:963,30,0	0/0:22,0:23:66.23:0,66,3247	1/1:14,0:15:12.04:398,12,0	0/0:15,0:15:32.74:0,33,1250	0/0:13,0:13:27.07:0,27,1154	0/0:31,0:29:57.09:0,57,2743	1/1:14,0:14:6.02:143,6,0	1/1:8,1:9:6.02:196,6,0	1/1:8,0:8:3.01:92,3,0	0/0:24,0:24:51.18:0,51,1777	0/0:15,0:15:30.06:0,30,1140	0/0:16,0:16:30.99:0,31,1341	0/0:8,0:8:18.06:0,18,632
chr10	51605857	.	CGCGCGCGCGCGCGTGTGT	C	5940.88	PASS	AB=1.000;AC=21;AF=0.389;AN=54;BaseQRankSum=10.458;DP=470;FS=11.018;HRun=0;HaplotypeScore=190.2884;InbreedingCoeff=0.8244;MQ=57.53;MQ0=4;MQRankSum=-9.935;QD=39.34;ReadPosRankSum=5.667;VQSLOD=2.9887;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,14:18:18.06:931,18,0	1/1:4,0:4:3.01:107,3,0	./.	0/1:4,0:3:32.74:37,0,33	0/0:23,0:23:60.02:0,60,2495	0/0:20,0:20:51.13:0,51,2807	0/0:33,0:32:82.16:0,82,4569	0/0:24,0:23:35.63:0,36,1038	0/0:12,0:12:30.10:0,30,1423	0/0:17,0:17:45.12:0,45,2050	0/0:11,0:11:18.05:0,18,986	1/1:1,18:21:21.07:978,21,0	1/1:2,11:14:15.05:783,15,0	0/0:20,0:19:42.14:0,42,1723	1/1:4,1:25:27.09:975,27,0	1/1:0,3:20:29.77:1158,30,0	0/0:27,0:27:75.26:0,75,4333	1/1:5,0:16:12.04:327,12,0	0/0:14,0:14:35.75:0,36,1346	0/0:12,0:12:30.08:0,30,1505	0/0:32,0:30:63.14:0,63,3647	1/1:2,11:14:6.02:265,6,0	1/1:2,1:7:6.02:288,6,0	1/1:1,0:6:3.01:92,3,0	0/0:24,0:24:51.18:0,51,2120	0/0:17,0:16:39.09:0,39,1872	0/0:18,0:18:49.05:0,49,2711	0/0:9,0:8:24.08:0,24,1049
chr10	51605869	.	CGTGTGT	C	1975.59	PASS	AB=0.889;AC=20;AF=0.385;AN=52;BaseQRankSum=9.678;DP=458;FS=1.313;HRun=0;HaplotypeScore=119.1273;InbreedingCoeff=0.7544;MQ=50.86;MQ0=6;MQRankSum=-8.961;QD=10.68;ReadPosRankSum=5.085;VQSLOD=2.4436;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:18:18.06:273,18,0	1/1:10,0:10:8.75:89,9,0	./.	./.	0/0:19,0:19:27.09:0,27,602	0/0:14,0:18:24.08:0,24,650	0/0:32,0:31:42.12:0,42,1005	0/0:22,0:21:3.44:0,3,21	0/0:13,0:13:15.05:0,15,381	0/0:18,0:17:23.10:0,23,504	0/0:7,0:9:9.03:0,9,233	1/1:22,0:22:20.85:280,21,0	1/1:12,0:12:15.05:234,15,0	0/1:16,0:19:0:0,0,0	1/1:23,0:23:29.98:320,30,0	1/1:22,0:22:29.42:351,29,0	0/0:27,0:29:33.11:0,33,782	0/1:16,1:16:4.05:118,0,4	0/0:12,0:12:3.01:0,3,48	0/0:10,0:11:8.17:0,8,169	0/0:35,0:32:33.10:0,33,876	1/1:13,0:13:6.02:86,6,0	1/1:6,0:6:6.02:83,6,0	0/0:8,0:8:0:0,0,0	1/1:9,10:21:18.53:326,19,0	0/0:19,0:18:33.08:0,33,642	0/0:17,0:17:33.58:0,34,849	0/0:6,0:5:6.02:0,6,163
chr10	51606438	.	A	AT	5430.44	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-3.332;DP=649;FS=0.336;HRun=8;HaplotypeScore=60.8983;InbreedingCoeff=0.9863;MQ=67.86;MQ0=0;MQRankSum=-1.142;QD=28.43;ReadPosRankSum=2.097;VQSLOD=5.2395;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,18:21:23.68:526,24,0	1/1:0,6:6:15.04:173,15,0	0/0:10,0:10:15:0,15,137	0/0:8,0:8:17.33:0,17,148	0/0:41,0:41:99:0,114,1038	0/0:30,0:30:84.03:0,84,764	0/0:24,0:24:57.02:0,57,522	0/0:29,0:29:68.05:0,68,603	0/0:16,0:16:36.02:0,36,329	0/0:38,0:38:99:0,105,950	0/0:28,0:28:81.04:0,81,741	1/1:5,24:29:63.14:711,63,0	1/1:3,15:18:42.12:485,42,0	0/0:16,1:17:10.41:0,10,350	1/1:2,29:31:81.24:935,81,0	1/1:2,18:20:51.15:589,51,0	0/0:32,0:32:78.01:0,78,712	1/1:0,17:17:45.13:518,45,0	0/0:16,0:16:42.02:0,42,384	0/0:25,0:25:66.03:0,66,604	0/0:10,0:10:27:0,27,242	1/1:1,20:21:57.09:628,57,0	1/1:1,18:19:54.16:623,54,0	1/1:2,7:9:21.06:242,21,0	0/0:28,0:28:84.05:0,84,769	0/0:36,0:36:96.05:0,96,878	0/0:41,0:41:99:0,108,978	0/0:29,0:28:78.04:0,78,714
chr10	51606799	.	T	TTTC	7922.28	PASS	AB=0.977;AC=21;AF=0.375;AN=56;BaseQRankSum=7.128;DP=628;FS=0.366;HRun=0;HaplotypeScore=100.5362;InbreedingCoeff=0.9244;MQ=63.02;MQ0=3;MQRankSum=0.626;QD=34.00;ReadPosRankSum=8.045;VQSLOD=4.7907;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,34:36:81.23:1539,81,0	1/1:0,12:12:23.66:466,24,0	0/1:42,0:16:13.12:13,0,197	0/0:32,0:14:22.29:0,22,133	0/0:25,0:25:64.02:0,64,842	0/0:22,0:22:64.94:0,65,891	0/0:18,0:18:47.95:0,48,627	0/0:26,0:26:66.93:0,67,786	0/0:17,0:17:49.86:0,50,612	0/0:20,0:20:50.89:0,51,666	0/0:25,0:25:71.96:0,72,996	1/1:2,19:21:42.13:838,42,0	1/1:2,21:22:54.64:1074,55,0	0/0:31,0:30:83.67:0,84,1000	1/1:0,20:20:42.14:833,42,0	1/1:1,14:16:39.10:740,39,0	0/0:40,0:40:99:0,118,1593	1/1:1,14:16:30.07:564,30,0	0/0:15,0:15:40.53:0,41,491	0/0:24,0:24:68.95:0,69,925	0/0:8,0:8:17.26:0,17,200	1/1:0,17:17:47.89:823,48,0	1/1:0,19:19:33.03:636,33,0	1/1:2,8:10:21.06:396,21,0	0/0:28,0:28:81.63:0,82,1205	0/0:25,0:25:72.91:0,73,908	0/0:25,0:25:65.87:0,66,746	0/0:13,0:13:36.11:0,36,555
chr10	51607860	.	G	GCTCCC	22875.77	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-3.112;DP=808;FS=0.578;HRun=0;HaplotypeScore=145.6455;InbreedingCoeff=0.9998;MQ=86.27;MQ0=0;MQRankSum=-13.854;QD=75.50;ReadPosRankSum=2.271;VQSLOD=6.5843;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:16,29:51:90.31:2712,90,0	1/1:1,9:10:30.10:968,30,0	0/0:33,0:33:90.31:0,90,1945	0/0:29,0:29:75.26:0,75,1572	0/0:32,0:32:93.30:0,93,1979	0/0:29,0:29:81.22:0,81,1659	0/0:32,0:32:93.30:0,93,2011	0/0:23,0:23:60.20:0,60,1299	0/0:27,0:27:78.27:0,78,1740	0/0:39,0:39:99:0,114,2522	0/0:24,0:24:72.25:0,72,1604	1/1:4,34:40:99:3255,105,0	1/1:5,23:30:84.29:2554,84,0	0/0:40,0:40:99:0,117,2606	1/1:5,27:37:96.33:2899,96,0	1/1:5,37:43:56.50:3731,57,0	0/0:33,0:33:90.31:0,90,1924	1/1:7,10:19:42.14:1356,42,0	0/0:26,0:26:72.22:0,72,1504	0/0:27,0:27:75.24:0,75,1609	0/0:23,0:23:69.22:0,69,1494	1/1:5,22:27:72.25:2233,72,0	1/1:5,16:21:51.18:1622,51,0	1/1:3,20:25:47.82:1547,48,0	0/0:20,0:20:57.20:0,57,1271	0/0:35,0:35:99:0,99,2189	0/0:23,0:21:66.23:0,66,1447	0/0:10,0:10:30.10:0,30,669
chr10	51609768	.	A	AT	10447.61	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-16.407;DP=691;FS=8.458;HRun=2;HaplotypeScore=63.6663;InbreedingCoeff=0.9999;MQ=81.67;MQ0=0;MQRankSum=-1.208;QD=37.99;ReadPosRankSum=4.127;VQSLOD=5.2462;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,51:51:99:2030,141,0	1/1:1,12:13:33.11:475,33,0	0/0:16,0:16:45.14:0,45,555	0/0:20,0:20:56.65:0,57,650	0/0:26,0:26:75.20:0,75,903	0/0:20,0:20:57.18:0,57,705	0/0:30,0:30:84.26:0,84,1041	0/0:26,0:26:78.22:0,78,944	0/0:24,0:24:72.23:0,72,892	0/0:23,0:23:66.20:0,66,806	0/0:14,0:14:42.13:0,42,521	1/1:1,33:34:96.32:1382,96,0	1/1:0,28:28:78.26:1122,78,0	0/0:32,0:32:93.28:0,93,1140	1/1:1,38:39:99:1555,108,0	1/1:3,20:23:51.17:733,51,0	0/0:26,0:26:75.24:0,75,930	1/1:1,24:25:66.22:950,66,0	0/0:24,0:24:63.19:0,63,769	0/0:16,0:16:45.14:0,45,557	0/0:27,0:27:78.25:0,78,967	1/1:2,17:19:54.18:773,54,0	1/1:0,17:17:39.13:561,39,0	1/1:2,24:26:60.20:864,60,0	0/0:20,0:20:48.12:0,48,582	0/0:28,0:28:78.24:0,78,967	0/0:33,0:33:99:0,99,1209	0/0:11,0:11:33.10:0,33,408
chr10	51609875	.	ACAG	A	1189.22	PASS	AB=0.952;AC=8;AF=0.286;AN=28;BaseQRankSum=8.104;DP=585;FS=2.354;HRun=0;HaplotypeScore=156.6982;InbreedingCoeff=0.5084;MQ=72.99;MQ0=3;MQRankSum=-0.010;QD=8.87;ReadPosRankSum=1.218;VQSLOD=3.5324;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:3.01:0,3,57	./.	./.	./.	./.	./.	0/0:28,0:28:39.13:0,39,676	0/0:15,0:15:3.01:0,3,41	0/0:36,0:36:45.14:0,45,810	./.	./.	0/1:42,2:44:29.88:30,0,708	0/0:30,1:31:9.07:0,9,782	0/0:29,1:30:24.09:0,24,1080	1/1:17,9:26:33.11:428,33,0	1/1:18,4:22:29.89:321,30,0	0/0:37,0:36:66.23:0,66,1203	1/1:11,13:24:39.13:507,39,0	./.	./.	0/0:45,0:44:9.03:0,9,145	./.	./.	0/0:32,1:33:9.01:0,9,760	./.	./.	0/1:17,1:18:27.09:27,0,159	./.
chr10	51614964	.	AGCAG	A	6551.63	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=13.360;DP=779;FS=2.673;HRun=0;HaplotypeScore=132.5059;InbreedingCoeff=0.9926;MQ=79.61;MQ0=0;MQRankSum=-4.849;QD=46.14;ReadPosRankSum=2.738;VQSLOD=5.7952;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:93.32:0,93,2472	0/0:10,0:10:27.09:0,27,704	0/0:31,0:31:84.29:0,84,2231	0/0:15,0:16:35.98:0,36,974	0/0:27,0:27:81.25:0,81,2139	0/0:22,0:22:66.23:0,66,1790	0/0:34,0:34:99:0,102,2628	0/0:33,0:33:84.29:0,84,2179	0/0:19,0:19:54.19:0,54,1465	0/0:29,0:29:81.28:0,81,2188	0/0:23,0:23:69.24:0,69,1875	1/1:3,28:31:78.27:1496,78,0	1/1:2,31:33:87.30:1686,87,0	0/0:35,0:35:93.32:0,93,2541	0/0:35,0:35:99:0,105,2797	0/0:37,0:37:99:0,111,3007	0/0:38,0:38:99:0,111,2928	0/0:28,0:28:84.29:0,84,2297	0/0:30,0:30:90.31:0,90,2439	0/0:27,0:27:78.25:0,78,2077	0/0:31,0:31:87.30:0,87,2331	1/1:1,20:21:57.20:1104,57,0	1/1:2,24:26:60.06:1162,60,0	1/1:0,31:31:56.75:1104,57,0	0/0:35,0:35:99:0,102,2737	0/0:32,0:32:87.29:0,87,2291	0/0:29,0:28:87.30:0,87,2360	0/0:4,0:4:12.04:0,12,329
chr10	51616514	.	G	GA	3180.88	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=0.961;DP=623;FS=5.003;HRun=8;HaplotypeScore=64.6410;InbreedingCoeff=0.8987;MQ=72.21;MQ0=1;MQRankSum=-0.957;QD=25.25;ReadPosRankSum=0.595;VQSLOD=4.4956;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:60:0,60,545	0/0:6,0:6:18.01:0,18,165	0/1:14,0:14:2.65:3,0,159	0/0:10,0:10:5.38:0,5,127	0/0:40,0:40:99:0,111,1008	0/0:24,0:24:66.03:0,66,603	0/0:26,0:26:75.01:0,75,677	0/0:35,0:35:87.01:0,87,792	0/0:36,0:35:93.03:0,93,846	0/0:20,0:20:56.25:0,56,501	0/0:26,0:26:63.03:0,63,576	1/1:2,23:25:66.20:762,66,0	1/1:4,24:29:75.22:864,75,0	0/0:17,0:17:48.02:0,48,439	0/0:28,0:28:69.01:0,69,626	0/0:20,0:20:57.03:0,57,522	0/0:24,0:24:65.98:0,66,591	0/0:23,0:23:66.04:0,66,604	0/0:15,0:15:42.01:0,42,381	0/0:22,0:22:53.99:0,54,489	0/0:18,0:18:54.03:0,54,494	1/1:4,18:22:51.15:587,51,0	1/1:1,19:20:54.16:621,54,0	1/1:1,15:16:45.13:519,45,0	0/0:21,0:21:62.89:0,63,559	0/0:25,0:25:59.80:0,60,530	0/0:24,0:24:66:0,66,594	0/0:11,0:11:33.02:0,33,302
chr10	51616797	.	G	GACAGTAGT	3081.51	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-4.565;DP=743;FS=14.491;HRun=0;HaplotypeScore=181.8066;InbreedingCoeff=1.0000;MQ=85.53;MQ0=0;MQRankSum=-8.192;QD=96.30;ReadPosRankSum=2.076;VQSLOD=3.8165;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,22:32:72.25:3176,72,0	0/0:16,0:16:45.14:0,45,1166	0/0:23,0:23:66.12:0,66,1663	0/0:27,0:27:72.25:0,72,1884	0/0:40,0:40:99:0,120,3275	0/0:24,0:24:69.24:0,69,1925	0/0:28,0:28:81.24:0,81,2155	0/0:30,0:30:87.29:0,87,2393	0/0:23,0:23:66.23:0,66,1793	0/0:21,0:21:57.19:0,57,1515	0/0:18,0:18:54.17:0,54,1429	0/0:23,0:23:69.21:0,69,1833	0/0:25,0:25:72.23:0,72,1926	0/0:31,0:31:90.28:0,90,2408	0/0:30,0:30:81.28:0,81,2241	0/0:30,0:30:87.24:0,87,2335	0/0:41,0:41:99:0,117,3089	0/0:26,0:26:75.20:0,75,2048	0/0:25,0:25:69.24:0,69,1946	0/0:24,0:24:69.24:0,69,1934	0/0:27,0:27:78.27:0,78,2206	0/0:19,0:19:48.16:0,48,1358	0/0:23,0:23:69.24:0,69,1936	0/0:35,0:35:93.22:0,93,2383	0/0:22,0:22:57.17:0,57,1493	0/0:32,0:32:96.32:0,96,2649	0/0:32,0:32:90.31:0,90,2466	0/0:16,0:16:48.16:0,48,1301
chr10	51618070	.	GA	G	976.90	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=2.526;DP=526;FS=1.205;HRun=9;HaplotypeScore=63.2572;InbreedingCoeff=0.7703;MQ=77.16;MQ0=1;MQRankSum=0.892;QD=14.37;ReadPosRankSum=1.573;VQSLOD=3.7732;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:42.07:0,42,460	1/1:0,10:10:23.93:220,24,0	0/0:27,0:18:33.41:0,33,296	0/0:12,0:7:10.92:0,11,84	0/0:23,0:23:69.12:0,69,778	0/0:20,0:20:54.16:0,54,623	0/0:22,0:22:54.09:0,54,574	0/0:33,0:33:87.05:0,87,933	0/0:14,0:14:39.07:0,39,427	0/0:23,0:23:63.18:0,63,719	0/0:25,0:25:60.17:0,60,681	0/1:20,0:20:24.92:25,0,85	0/0:19,0:19:31.48:0,31,124	0/0:20,0:20:54.09:0,54,561	1/1:6,9:14:38.97:339,39,0	1/1:6,17:23:60.02:541,60,0	0/0:32,0:32:90.20:0,90,1002	0/0:8,0:8:18.05:0,18,208	0/0:20,0:20:51.11:0,51,559	0/0:16,0:16:39.10:0,39,438	0/0:4,0:4:12.04:0,12,138	0/0:16,0:16:4.21:0,4,69	0/0:22,0:22:28.17:0,28,191	0/0:13,0:13:26.95:0,27,102	0/0:27,0:27:72.20:0,72,822	0/0:14,0:14:39.08:0,39,437	0/0:28,0:28:75.11:0,75,809	0/0:4,0:4:12.04:0,12,138
chr10	51618155	.	C	CA	3036.14	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-1.000;DP=498;FS=2.849;HRun=10;HaplotypeScore=58.1210;InbreedingCoeff=0.9698;MQ=71.84;MQ0=2;MQRankSum=-0.756;QD=18.07;ReadPosRankSum=1.743;VQSLOD=4.4298;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,21:23:57.14:608,57,0	1/1:0,0:5:14.24:71,14,0	0/0:10,0:9:16.98:0,17,125	0/0:9,0:7:5.90:0,6,49	0/0:27,1:28:30.97:0,31,461	0/0:24,0:24:59.92:0,60,493	0/0:13,0:13:38.91:0,39,313	0/0:28,0:28:53.83:0,54,439	0/0:10,0:11:12.56:0,13,179	0/0:16,0:16:41.95:0,42,345	0/0:22,0:22:59.92:0,60,492	1/1:3,12:15:33.08:352,33,0	1/1:2,16:18:42.10:446,42,0	0/0:24,0:24:59.90:0,60,493	1/1:2,0:15:25.77:135,26,0	1/1:3,1:23:45.52:229,46,0	0/0:18,0:18:44.90:0,45,365	1/1:3,1:18:31.36:161,31,0	0/0:17,0:16:44.94:0,45,369	0/0:20,0:21:55.96:0,56,449	0/0:4,0:4:11.97:0,12,95	1/1:4,16:20:23.48:455,23,0	1/1:2,12:14:30.07:319,30,0	1/1:0,16:16:45.11:480,45,0	0/0:29,0:29:73.90:0,74,593	0/0:18,0:18:50.94:0,51,419	0/0:29,0:29:74.89:0,75,615	0/0:8,0:8:20.96:0,21,172
chr10	51618662	.	CA	C	4966.79	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=14.961;DP=770;FS=0.707;HRun=4;HaplotypeScore=79.1563;InbreedingCoeff=0.9980;MQ=78.56;MQ0=0;MQRankSum=-1.250;QD=33.11;ReadPosRankSum=3.628;VQSLOD=5.4148;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,108,1506	0/0:12,0:12:33.11:0,33,462	0/0:19,0:19:45.07:0,45,530	0/0:17,0:17:32.97:0,33,362	0/0:31,0:31:93.31:0,93,1300	0/0:21,0:21:63.21:0,63,882	0/0:25,0:25:72.23:0,72,993	0/0:42,0:41:99:0,114,1567	0/0:26,0:26:75.24:0,75,1032	0/0:46,0:46:99:0,132,1829	0/0:22,0:22:60.20:0,60,840	1/1:0,35:35:99:1188,99,0	1/1:0,29:29:81.25:972,81,0	0/0:32,0:32:96.29:0,96,1310	0/0:29,0:29:87.29:0,87,1218	0/0:37,0:37:99:0,111,1522	0/0:27,0:27:81.27:0,81,1133	0/0:21,0:21:57.17:0,57,780	0/0:25,0:25:75.24:0,75,1024	0/0:31,0:31:90.29:0,90,1243	0/0:30,0:30:81.27:0,81,1132	1/1:2,30:32:87.27:1044,87,0	1/1:0,27:27:68.81:828,69,0	1/1:1,26:27:78.24:936,78,0	0/0:29,0:29:87.29:0,87,1219	0/0:26,0:26:75.20:0,75,1012	0/0:27,0:27:72.18:0,72,968	0/0:8,0:8:18.06:0,18,252
chr10	51619300	.	AT	A	9230.77	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=13.240;DP=680;FS=1.289;HRun=2;HaplotypeScore=71.3642;InbreedingCoeff=0.9988;MQ=69.24;MQ0=0;MQRankSum=-2.373;QD=33.44;ReadPosRankSum=5.624;VQSLOD=4.6885;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,61:63:99:2025,157,0	1/1:0,16:16:41.93:545,42,0	0/0:24,0:24:72.21:0,72,1030	0/0:25,0:25:75.25:0,75,1100	0/0:34,0:34:99:0,99,1441	0/0:20,0:20:60.17:0,60,858	0/0:18,0:18:54.18:0,54,809	0/0:22,0:22:63.20:0,63,926	0/0:26,0:26:78.25:0,78,1150	0/0:20,0:20:60.20:0,60,884	0/0:16,0:16:48.16:0,48,719	1/1:1,19:20:51.17:662,51,0	1/1:1,28:29:75.24:973,75,0	0/0:24,0:24:72.23:0,72,1059	1/1:0,34:34:99:1286,99,0	1/1:0,22:22:57.19:740,57,0	0/0:29,0:29:87.27:0,87,1281	1/1:1,22:23:60.19:779,60,0	0/0:26,0:26:75.25:0,75,1116	0/0:19,0:19:57.19:0,57,854	0/0:19,0:19:54.18:0,54,801	1/1:0,21:21:54.18:701,54,0	1/1:0,22:22:54.17:701,54,0	1/1:0,26:26:63.20:818,63,0	0/0:19,0:19:54.18:0,54,809	0/0:24,0:24:72.23:0,72,1060	0/0:33,0:33:99:0,99,1482	0/0:6,0:6:18.06:0,18,268
chr10	51620495	.	AAATT	A	5290.95	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=14.593;DP=642;FS=6.673;HRun=0;HaplotypeScore=117.6909;InbreedingCoeff=0.9978;MQ=80.05;MQ0=0;MQRankSum=-10.556;QD=45.22;ReadPosRankSum=1.371;VQSLOD=5.5871;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,120,3131	0/0:9,0:9:27.09:0,27,729	0/0:17,0:17:51.14:0,51,1182	0/0:18,0:18:35.90:0,36,770	0/0:25,0:25:72.24:0,72,1888	0/0:28,0:28:84.28:0,84,2186	0/0:24,0:24:66.21:0,66,1669	0/0:26,0:26:75.25:0,75,1933	0/0:23,0:23:69.21:0,69,1717	0/0:24,0:24:66.23:0,66,1765	0/0:16,0:16:48.16:0,48,1268	1/1:0,28:28:72.25:1366,72,0	1/1:1,20:21:48.16:910,48,0	0/0:32,0:32:93.30:0,93,2438	0/0:39,0:39:99:0,117,3042	0/0:21,0:21:63.22:0,63,1659	0/0:19,0:19:57.18:0,57,1455	1/1:0,26:26:66.23:1253,66,0	0/0:26,0:26:72.24:0,72,1878	0/0:19,0:19:57.17:0,57,1425	0/0:25,0:25:72.20:0,72,1762	1/1:0,15:15:36.12:682,36,0	1/1:0,14:14:30.10:568,30,0	1/1:1,12:13:27.09:512,27,0	0/0:19,0:19:57.20:0,57,1538	0/0:40,0:40:99:0,111,2873	0/0:27,0:27:81.27:0,81,2117	0/0:6,0:6:18.06:0,18,485
chr10	51621336	.	CTTTTTTTT	C	5179.62	PASS	AB=0.563;AC=11;AF=0.196;AN=56;BaseQRankSum=9.473;DP=728;FS=0.427;HRun=17;HaplotypeScore=191.1720;InbreedingCoeff=0.8921;MQ=68.60;MQ0=7;MQRankSum=-12.262;QD=39.24;ReadPosRankSum=7.718;VQSLOD=1.3267;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:30:39.21:0,39,418	0/0:2,0:10:4.45:0,4,98	0/0:48,0:16:23.83:0,24,345	0/0:56,0:22:10.31:0,10,601	0/0:35,0:36:88.89:0,89,2183	0/0:22,0:24:60.20:0,60,1974	0/0:14,0:18:36.11:0,36,1193	0/0:38,0:43:90.22:0,90,2490	0/0:20,0:21:54.18:0,54,1849	0/0:19,0:20:54.17:0,54,1512	0/0:17,0:18:45.12:0,45,1446	1/1:2,25:27:60.09:1338,60,0	1/1:1,30:31:66.15:1472,66,0	0/0:21,0:21:54.15:0,54,1655	0/0:8,0:31:43.45:0,43,414	0/0:7,0:29:65.21:0,65,450	0/0:26,0:26:53.31:0,53,1792	0/1:4,0:18:2.47:138,0,2	0/0:29,0:29:57.18:0,57,1731	0/0:23,0:23:57.16:0,57,1691	0/0:10,0:10:27.09:0,27,1045	1/1:1,18:19:48.10:1070,48,0	1/1:3,12:15:25.76:600,26,0	1/1:3,19:22:27.73:561,28,0	0/0:13,0:14:33.10:0,33,1063	0/0:29,0:30:78.20:0,78,2257	0/0:32,0:32:78.14:0,78,2301	0/0:19,0:25:54.19:0,54,2024
chr10	51621700	.	AGT	A	3513.24	PASS	AB=0.904;AC=16;AF=0.286;AN=56;BaseQRankSum=12.225;DP=677;FS=3.427;HRun=0;HaplotypeScore=85.0503;InbreedingCoeff=0.8212;MQ=63.23;MQ0=1;MQRankSum=0.335;QD=18.20;ReadPosRankSum=4.418;VQSLOD=3.5703;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:11,34:45:75.23:905,75,0	0/0:10,0:10:24.08:0,24,377	0/0:30,0:19:15.55:0,16,336	0/0:25,0:17:32.92:0,33,485	0/0:19,1:20:41.73:0,42,652	0/0:28,1:29:25.21:0,25,850	0/0:25,0:25:60.20:0,60,964	0/0:32,0:31:66.20:0,66,987	0/0:15,0:15:33.10:0,33,507	0/1:21,3:24:13.52:14,0,627	0/0:27,1:28:39.06:0,39,1105	1/1:4,18:22:54.17:651,54,0	1/1:4,17:21:48.15:579,48,0	0/0:27,0:27:69.23:0,69,1070	0/1:21,2:23:9.16:9,0,852	0/0:31,1:32:51.10:0,51,1303	0/0:21,0:21:39.13:0,39,623	1/1:3,9:12:21.06:253,21,0	0/0:29,0:28:51.64:0,52,793	0/0:31,1:33:36.94:0,37,1219	0/0:20,0:20:57.18:0,57,905	1/1:2,15:18:38.87:414,39,0	1/1:1,8:9:14.96:181,15,0	1/1:2,17:19:42.13:507,42,0	0/0:33,2:35:26.94:0,27,1410	0/0:26,0:26:60.20:0,60,955	0/0:24,0:24:27.13:0,27,875	0/0:21,1:23:8.95:0,9,615
chr10	51623131	.	G	GA	1277.67	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-9.858;DP=535;FS=4.883;HRun=8;HaplotypeScore=56.9765;InbreedingCoeff=0.9653;MQ=76.34;MQ0=0;MQRankSum=0.140;QD=27.18;ReadPosRankSum=2.373;VQSLOD=4.4839;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:39.48:0,39,358	1/1:1,8:9:21.06:242,21,0	0/0:18,0:19:35.04:0,35,307	0/0:7,0:7:11.89:0,12,98	0/0:18,0:18:48.02:0,48,439	0/0:19,0:19:51.01:0,51,462	0/0:17,0:17:51.03:0,51,467	0/0:22,0:22:54.01:0,54,494	0/0:16,0:16:48.03:0,48,439	0/0:27,0:27:78.04:0,78,714	0/0:34,0:34:87.04:0,87,796	0/0:21,0:21:57.03:0,57,522	0/0:15,0:15:45.02:0,45,412	0/0:24,0:24:63.02:0,63,577	1/1:0,19:19:54.16:623,54,0	1/1:1,18:19:48.14:554,48,0	0/0:22,0:21:60.03:0,60,548	0/0:25,0:25:72.03:0,72,659	0/0:18,0:18:45.02:0,45,412	0/0:31,0:31:78.02:0,78,710	0/0:7,0:7:21.01:0,21,192	0/0:19,0:19:54.03:0,54,494	0/0:24,0:24:69.04:0,69,631	0/0:10,0:10:27.01:0,27,247	0/0:20,0:20:53.94:0,54,471	0/0:28,0:28:84.05:0,84,769	0/0:25,0:24:69.03:0,69,631	0/0:3,0:3:9:0,9,82
chr10	51624256	.	GGAGA	G	362.05	PASS	AB=0.912;AC=12;AF=0.231;AN=52;BaseQRankSum=1.546;DP=705;FS=52.869;HRun=0;HaplotypeScore=117.7926;InbreedingCoeff=0.4071;MQ=68.80;MQ0=32;MQRankSum=0.952;QD=1.42;ReadPosRankSum=-1.909;VQSLOD=-0.1935;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:18:15.05:0,15,233	0/0:12,0:12:12.03:0,12,145	0/1:78,0:29:0:0,0,0	0/0:80,0:28:0.94:0,1,2	0/0:20,0:20:12.03:0,12,184	0/0:18,0:18:21.04:0,21,260	./.	0/0:23,0:21:8.99:0,9,95	0/0:16,0:17:15.05:0,15,245	0/0:24,0:24:15.05:0,15,271	0/0:17,0:17:6.02:0,6,74	1/1:23,0:23:9.03:135,9,0	0/0:29,0:28:0:0,0,0	0/1:24,0:25:28.47:28,0,219	0/0:18,0:18:5.98:0,6,67	0/0:24,0:29:24.06:0,24,320	0/0:29,0:31:35.78:0,36,521	0/1:13,7:19:66.06:81,0,66	./.	0/0:16,0:16:3.01:0,3,41	0/0:13,0:12:12.04:0,12,196	1/1:18,7:24:3.01:46,3,0	1/1:21,0:21:3.01:47,3,0	1/1:30,14:45:9.50:140,9,0	0/0:23,0:23:18.06:0,18,313	0/0:22,0:23:20.81:0,21,343	0/1:15,1:17:24.70:25,0,303	0/0:7,0:7:9.01:0,9,97
chr10	51624329	.	G	GAGGAGAAGGAGA	2218.24	PASS	AB=1.000;AC=10;AF=0.185;AN=54;BaseQRankSum=7.705;DP=642;FS=10.922;HRun=0;HaplotypeScore=202.4569;InbreedingCoeff=0.8082;MQ=54.76;MQ0=26;MQRankSum=-8.330;QD=14.59;ReadPosRankSum=-0.100;VQSLOD=1.8058;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:5,10:30:9.03:494,9,0	1/1:10,0:10:22.88:303,23,0	./.	0/1:44,0:16:0:0,0,0	0/0:20,0:20:39.12:0,39,1017	0/0:21,0:21:53.85:0,54,1461	0/0:23,0:22:47.37:0,47,1085	0/0:27,0:25:11.89:0,12,141	0/0:12,0:12:27.07:0,27,621	0/0:25,0:24:48.15:0,48,1256	0/0:11,0:11:30.03:0,30,891	0/0:19,0:19:42.12:0,42,1093	0/0:24,0:24:63.15:0,63,1360	0/0:15,0:15:39.09:0,39,1064	1/1:27,0:27:63.18:853,63,0	0/1:27,0:25:48.72:555,0,49	0/0:27,0:27:42.66:0,43,1326	1/1:12,0:12:17.20:169,17,0	0/0:21,0:17:17.90:0,18,536	0/0:21,0:21:42.13:0,42,1222	0/0:26,0:26:51.13:0,51,1287	0/0:19,0:18:30.09:0,30,757	0/0:18,0:18:30.06:0,30,677	0/0:36,0:36:37.45:0,37,1345	0/0:16,0:16:27.09:0,27,793	0/0:24,0:24:48.13:0,48,1225	0/0:18,0:18:33.10:0,33,992	0/0:13,0:13:30.10:0,30,1029
chr10	51624479	.	AGGAACTTTGTGAG	A	10604.47	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=14.129;DP=788;FS=12.524;HRun=0;HaplotypeScore=297.0028;InbreedingCoeff=0.9998;MQ=82.43;MQ0=0;MQRankSum=-14.967;QD=80.95;ReadPosRankSum=3.330;VQSLOD=3.2557;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,138,8297	0/0:15,0:15:45.15:0,45,2769	0/0:24,0:24:66.23:0,66,3373	0/0:34,0:34:81.01:0,81,3737	0/0:34,0:34:99:0,102,6333	0/0:36,0:36:99:0,108,6789	0/0:31,0:31:90.27:0,90,5285	0/0:37,0:37:99:0,99,5989	0/0:23,0:23:69.24:0,69,4267	0/0:29,0:29:78.27:0,78,5049	0/0:29,0:29:84.29:0,84,5009	1/1:4,16:20:42.14:1664,42,0	1/1:4,19:23:51.18:2020,51,0	0/0:28,0:28:81.28:0,81,5056	0/0:36,0:36:99:0,105,6447	0/0:34,0:33:93.32:0,93,5668	0/0:23,0:23:66.23:0,66,4118	1/1:1,14:15:30.10:1160,30,0	0/0:26,0:26:69.24:0,69,4045	0/0:30,0:30:90.26:0,90,5280	0/0:28,0:28:81.28:0,81,5146	1/1:6,21:27:60.12:2177,60,0	1/1:3,24:27:63.17:2396,63,0	1/1:6,13:19:30.10:1188,30,0	0/0:26,0:26:69.24:0,69,4215	0/0:35,0:35:99:0,105,6706	0/0:34,0:32:96.33:0,96,5602	0/0:15,0:15:45.15:0,45,2933
chr10	51625500	.	AT	A	10988.73	PASS	AB=0.529;AC=19;AF=0.339;AN=56;BaseQRankSum=19.939;DP=757;FS=1.932;HRun=1;HaplotypeScore=95.0430;InbreedingCoeff=0.9049;MQ=91.68;MQ0=0;MQRankSum=-3.790;QD=38.56;ReadPosRankSum=4.801;VQSLOD=5.1544;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,55:55:99:2006,144,0	1/1:0,14:14:42.14:587,42,0	0/0:33,0:33:96.30:0,96,1384	0/0:27,0:27:67.30:0,67,871	0/0:25,0:25:72.14:0,72,1092	0/0:21,0:21:63.18:0,63,956	0/0:34,0:34:99:0,102,1576	0/0:37,0:37:99:0,111,1711	0/0:23,0:23:69.24:0,69,1103	0/0:16,0:16:45.15:0,45,719	0/0:21,0:21:63.21:0,63,1007	1/1:0,25:25:75.25:1048,75,0	1/1:0,38:38:99:1510,108,0	0/0:24,0:24:72.23:0,72,1122	1/1:0,31:31:90.30:1259,90,0	0/1:3,24:27:68.61:845,0,69	0/0:41,0:41:99:0,123,1861	1/1:0,17:17:51.17:713,51,0	0/0:27,0:27:78.27:0,78,1247	0/0:32,0:32:93.30:0,93,1460	0/0:40,0:40:99:0,120,1854	1/1:0,23:23:63.21:881,63,0	1/1:0,26:26:72.24:1007,72,0	1/1:0,29:29:81.27:1133,81,0	0/0:18,0:18:54.17:0,54,841	0/0:25,0:25:75.23:0,75,1136	0/0:26,0:26:78.27:0,78,1240	0/0:2,0:2:6.02:0,6,96
chr10	51626536	.	T	TG	5909.59	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-14.370;DP=724;FS=6.924;HRun=2;HaplotypeScore=69.7604;InbreedingCoeff=0.9966;MQ=84.34;MQ0=0;MQRankSum=-1.831;QD=38.13;ReadPosRankSum=3.833;VQSLOD=5.4193;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:80.06:0,80,970	0/0:9,0:9:27.08:0,27,335	0/0:27,0:27:65.99:0,66,785	0/0:17,0:17:48.11:0,48,567	0/0:28,0:28:75.24:0,75,930	0/0:23,0:23:66.21:0,66,818	0/0:29,0:29:84.25:0,84,1029	0/0:43,0:43:99:0,129,1589	0/0:24,0:24:72.20:0,72,865	0/0:28,0:28:84.26:0,84,1040	0/0:24,0:24:72.23:0,72,888	1/1:0,19:19:51.17:734,51,0	1/1:2,31:33:81.27:1158,81,0	0/0:33,0:33:90.28:0,90,1115	0/0:35,0:35:99:0,102,1252	0/0:44,0:44:99:0,132,1624	0/0:17,0:17:51.16:0,51,632	1/1:1,25:26:69.23:994,69,0	0/0:17,0:17:45.14:0,45,558	0/0:27,0:27:78.22:0,78,941	0/0:18,0:18:48.15:0,48,595	1/1:0,19:19:54.18:778,54,0	1/1:2,19:21:54.18:777,54,0	1/1:1,36:37:99:1469,102,0	0/0:18,0:18:48.14:0,48,583	0/0:33,0:33:90.28:0,90,1115	0/0:41,0:40:99:0,120,1487	0/0:6,0:6:15.05:0,15,186
chr10	51628169	.	AT	A	1095.37	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=9.462;DP=555;FS=0.000;HRun=8;HaplotypeScore=80.4200;InbreedingCoeff=0.8988;MQ=73.00;MQ0=0;MQRankSum=-4.218;QD=15.87;ReadPosRankSum=-0.065;VQSLOD=3.5842;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:63.06:0,63,710	1/1:1,7:8:21.03:203,21,0	0/1:17,0:16:0.50:1,0,313	0/0:15,0:14:24.95:0,25,292	0/0:20,0:20:57.13:0,57,644	0/0:25,0:25:75.16:0,75,866	0/0:20,0:20:57.17:0,57,689	0/0:36,0:36:81.23:0,81,957	0/0:9,0:9:21.06:0,21,254	0/0:27,0:27:78.21:0,78,909	0/0:15,0:15:42.13:0,42,507	0/0:14,0:14:33.10:0,33,398	0/0:20,0:20:48.07:0,48,537	0/0:19,0:19:48.15:0,48,579	1/1:6,20:26:59.98:566,60,0	1/1:2,16:18:50.66:468,51,0	0/0:41,0:41:99:0,117,1413	0/0:11,0:11:24.06:0,24,277	0/0:25,0:25:57.13:0,57,654	0/0:29,0:29:78.22:0,78,920	0/0:17,0:17:48.15:0,48,578	0/0:11,0:11:24.07:0,24,280	0/0:15,0:15:39.10:0,39,449	0/0:8,0:8:15.05:0,15,181	0/0:29,0:29:84.11:0,84,978	0/0:16,0:16:42.13:0,42,507	0/0:24,0:24:60.18:0,60,725	0/0:16,0:16:39.12:0,39,471
chr10	51628199	.	CCT	C	265.59	PASS	AB=0.975;AC=16;AF=0.296;AN=54;BaseQRankSum=3.713;DP=603;FS=4.729;HRun=0;HaplotypeScore=105.5297;InbreedingCoeff=0.0197;MQ=59.24;MQ0=15;MQRankSum=1.288;QD=0.83;ReadPosRankSum=1.129;VQSLOD=1.7086;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:28:8.99:0,9,74	1/1:6,0:6:2.84:14,3,0	0/0:29,0:13:6.01:0,6,71	0/0:36,0:21:19.60:0,20,115	0/0:29,0:29:29.52:0,30,550	0/0:23,0:22:2.10:0,2,179	0/1:27,0:27:5.71:6,0,360	0/1:48,0:47:15.31:15,0,414	0/0:8,0:8:18.46:0,18,171	0/1:19,4:23:77.20:77,0,243	0/0:13,0:13:32.35:0,32,304	0/0:14,0:13:11.88:0,12,86	0/0:12,0:13:6.90:0,7,65	0/1:18,1:19:88.05:88,0,110	1/1:15,0:15:2.84:14,3,0	1/1:16,0:16:17.04:84,17,0	0/1:38,2:39:14.43:14,0,490	0/0:9,0:8:11.95:0,12,107	0/1:22,0:21:3.12:3,0,145	0/1:26,0:25:15.91:16,0,423	0/1:28,0:27:6.56:7,0,349	0/0:14,0:16:0:0,0,0	0/0:20,0:17:5.99:0,6,50	./.	0/1:28,0:27:71.34:71,0,264	0/0:20,0:20:14.92:0,15,378	0/1:22,0:23:3.71:4,0,303	0/0:14,0:13:18:0,18,179
chr10	51628200	.	CTCTCTCTCTCTCTCT	C	1163.77	PASS	AB=0.500;AC=5;AF=0.089;AN=56;BaseQRankSum=7.393;DP=602;FS=9.858;HRun=0;HaplotypeScore=231.5848;InbreedingCoeff=0.7190;MQ=58.98;MQ0=15;MQRankSum=-4.974;QD=41.56;ReadPosRankSum=-0.903;VQSLOD=1.6646;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:30.02:0,30,1217	0/1:0,0:5:14.67:88,0,15	0/0:29,0:13:35.12:0,35,838	0/0:35,0:20:53.20:0,53,2012	0/0:30,0:29:72.24:0,72,4265	0/0:23,0:22:51.15:0,51,2454	0/0:27,0:27:70.95:0,71,4287	0/0:48,0:47:99:0,132,6798	0/0:9,0:9:18.95:0,19,1317	0/0:24,0:24:71.73:0,72,3471	0/0:13,0:13:39.13:0,39,2536	0/0:15,0:13:24.08:0,24,981	0/0:14,0:13:27.93:0,28,984	0/0:20,0:20:51.15:0,51,2319	1/1:4,4:11:20.16:285,20,0	1/1:1,4:12:35.91:919,36,0	0/0:41,0:40:99:0,114,5315	0/0:9,0:8:18.06:0,18,912	0/0:21,0:20:60.19:0,60,2446	0/0:26,0:25:69.23:0,69,4084	0/0:28,0:27:60.68:0,61,3715	0/0:16,0:16:15.52:0,16,523	0/0:20,0:17:24.08:0,24,796	0/0:8,0:7:3.01:0,3,37	0/0:30,0:29:78.24:0,78,3722	0/0:22,0:22:66.22:0,66,3824	0/0:23,0:23:66.22:0,66,3862	0/0:15,0:14:42.14:0,42,2064
chr10	51628260	.	GTGTCTGTCTGTCTGTC	G	585.77	PASS	AB=0.953;AC=12;AF=0.214;AN=56;BaseQRankSum=5.285;DP=614;FS=1.239;HRun=0;HaplotypeScore=227.0035;InbreedingCoeff=0.6431;MQ=52.00;MQ0=23;MQRankSum=-3.823;QD=3.51;ReadPosRankSum=1.755;VQSLOD=2.5323;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:35,0:35:2.04:6,2,0	0/0:8,0:8:14.48:0,14,253	0/0:18,0:10:27.05:0,27,787	0/0:14,0:11:27.31:0,27,817	0/0:32,0:28:48.16:0,48,2687	0/0:23,0:23:56.41:0,56,2801	0/0:23,0:20:29.58:0,30,1397	0/0:30,0:26:48.16:0,48,1607	0/0:16,0:15:30.10:0,30,1749	0/0:31,0:30:57.11:0,57,2364	0/0:18,0:17:27.09:0,27,1529	1/1:20,1:20:5.58:246,6,0	1/1:16,0:15:6.80:393,7,0	0/0:20,0:19:39.13:0,39,2051	0/0:24,0:24:5.97:0,6,130	0/1:22,0:22:4.31:4,0,462	0/0:30,0:30:72.25:0,72,3487	1/1:5,0:4:3.01:57,3,0	0/0:11,0:11:21.07:0,21,896	0/0:29,0:28:39.08:0,39,1824	0/0:36,0:34:48.68:0,49,2442	0/1:14,2:16:0:0,0,0	0/1:27,1:25:0:0,0,0	0/1:23,0:23:0.04:0,0,0	0/0:24,0:22:42.14:0,42,2236	0/0:23,0:23:42.14:0,42,1988	0/0:21,0:21:54.19:0,54,2895	0/0:14,0:14:30.10:0,30,1894
chr10	51628262	.	GTCTGTCTGTCTGTC	G	656.64	PASS	AB=0.850;AC=9;AF=0.161;AN=56;BaseQRankSum=6.027;DP=595;FS=8.066;HRun=0;HaplotypeScore=203.0617;InbreedingCoeff=0.4504;MQ=53.54;MQ0=21;MQRankSum=-3.781;QD=5.81;ReadPosRankSum=0.010;VQSLOD=1.5163;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:35:1.25:3,1,0	0/0:6,0:8:12.09:0,12,183	0/0:20,0:12:33.07:0,33,1013	0/0:16,0:13:30.02:0,30,925	0/0:33,0:30:54.19:0,54,2944	0/0:22,0:22:56.41:0,56,2670	0/0:23,0:20:38.57:0,39,1440	0/0:30,0:26:65.85:0,66,1819	0/0:14,0:14:33.05:0,33,1655	0/0:27,0:26:65.67:0,66,2331	0/0:15,0:14:27.09:0,27,1434	1/1:3,15:18:0.41:238,0,0	1/1:7,9:15:4.27:463,4,0	0/0:21,0:20:50.76:0,51,2174	0/0:3,0:24:3.59:0,4,108	0/1:20,0:22:14.68:15,0,327	0/0:32,0:32:90.01:0,90,3679	0/1:5,0:4:15.61:51,0,16	0/0:12,0:11:26.99:0,27,889	0/0:26,0:25:24.97:0,25,1725	0/0:30,0:29:35.23:0,35,2322	0/1:8,8:16:0:0,0,0	0/0:6,20:24:0.47:0,0,1	0/0:5,18:23:0.35:0,0,1	0/0:24,0:21:37.87:0,38,2104	0/0:19,0:19:31.13:0,31,1947	0/0:21,0:21:56.78:0,57,2767	0/0:13,0:13:30.10:0,30,1778
chr10	51629357	.	TA	T	650.33	PASS	AB=0.923;AC=9;AF=0.161;AN=56;BaseQRankSum=4.532;DP=487;FS=0.000;HRun=12;HaplotypeScore=57.5009;InbreedingCoeff=0.5996;MQ=68.76;MQ0=1;MQRankSum=0.744;QD=7.56;ReadPosRankSum=2.793;VQSLOD=2.0861;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:26:48.41:0,48,250	1/1:0,4:5:13.99:99,14,0	0/0:8,0:6:8.88:0,9,71	0/1:10,0:9:0.69:1,0,33	0/0:29,2:31:32.13:0,32,658	0/0:19,0:19:42.06:0,42,416	0/0:11,1:12:9.81:0,10,268	0/0:33,0:33:50.16:0,50,659	0/0:14,0:15:38.74:0,39,357	0/1:15,2:17:4.40:4,0,320	0/0:16,0:19:50.70:0,51,458	0/0:13,0:13:15.97:0,16,101	0/0:8,0:8:8.77:0,9,53	0/1:12,2:14:7.44:7,0,277	1/1:2,14:16:32.86:255,33,0	1/1:2,19:24:35.44:428,35,0	0/0:20,1:22:33.71:0,34,509	0/0:22,0:22:48.33:0,48,238	0/0:18,1:21:16.15:0,16,327	0/0:16,0:17:38.91:0,39,380	0/0:16,0:16:42.08:0,42,426	0/0:10,0:10:20.12:0,20,128	0/0:8,0:8:8.52:0,9,42	0/0:5,0:5:2.84:0,3,14	0/0:22,1:25:39.53:0,40,537	0/0:28,1:30:48.73:0,49,657	0/0:19,1:19:18.82:0,19,360	0/0:20,1:21:21.81:0,22,443
chr10	51629369	.	A	AAAAAAC	1178.76	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=4.919;DP=508;FS=8.057;HRun=0;HaplotypeScore=109.0787;InbreedingCoeff=0.8881;MQ=67.12;MQ0=1;MQRankSum=-1.356;QD=15.72;ReadPosRankSum=-0.592;VQSLOD=2.4022;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:34.21:0,34,183	0/0:5,0:5:15.05:0,15,231	0/0:8,0:6:11.23:0,11,174	0/0:8,0:7:11.88:0,12,146	0/0:32,0:32:91.93:0,92,1476	0/0:17,0:17:50.13:0,50,803	0/0:11,0:11:33.09:0,33,582	0/0:31,0:31:81.01:0,81,1363	0/0:14,0:14:42.07:0,42,679	0/0:18,0:18:54.15:0,54,911	0/0:22,0:22:59.81:0,60,903	1/1:0,0:13:5.98:94,6,0	1/1:0,8:15:3.01:104,3,0	0/0:16,0:16:48.06:0,48,740	0/0:19,0:19:45.10:0,45,609	0/0:26,0:26:78.21:0,78,1133	0/0:22,0:22:66.18:0,66,1212	1/1:0,0:20:50.24:506,50,0	0/0:17,0:17:49:0,49,770	0/0:19,0:19:47.21:0,47,788	0/0:18,0:18:54.12:0,54,959	1/1:0,1:10:20.92:286,21,0	1/1:1,8:10:9.29:207,9,0	1/1:1,0:7:6.02:148,6,0	0/0:27,0:27:75.02:0,75,1170	0/0:31,0:31:93.20:0,93,1583	0/0:20,0:21:56.92:0,57,903	0/0:22,0:22:61.34:0,61,1034
chr10	51629560	.	C	CA	7089.81	PASS	AB=0.556;AC=19;AF=0.339;AN=56;BaseQRankSum=16.605;DP=596;FS=1.917;HRun=1;HaplotypeScore=73.4637;InbreedingCoeff=0.9166;MQ=79.91;MQ0=0;MQRankSum=-4.242;QD=39.61;ReadPosRankSum=3.365;VQSLOD=5.6258;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,25:26:72.24:1039,72,0	1/1:1,6:7:18.06:261,18,0	0/0:19,0:19:36.60:0,37,554	0/0:10,0:10:30.09:0,30,372	0/0:31,0:31:87.25:0,87,1100	0/0:26,0:26:75.24:0,75,974	0/0:27,0:27:75.24:0,75,974	0/0:37,0:37:99:0,105,1351	0/0:13,0:13:36.12:0,36,467	0/0:26,0:26:75.24:0,75,962	0/0:27,0:27:81.26:0,81,1047	1/1:0,19:19:51.17:739,51,0	1/1:0,15:15:39.13:563,39,0	0/0:18,0:18:54.18:0,54,701	1/1:1,27:28:84.28:1208,84,0	1/1:1,13:14:36.12:524,36,0	0/0:18,0:18:54.18:0,54,700	0/1:2,8:10:47.11:316,0,47	0/0:22,0:22:57.18:0,57,740	0/0:32,0:32:93.29:0,93,1189	0/0:16,0:16:48.14:0,48,608	1/1:1,19:20:57.19:830,57,0	1/1:0,17:17:42.14:611,42,0	1/1:0,23:23:69.23:999,69,0	0/0:32,0:32:96.31:0,96,1247	0/0:29,0:29:87.27:0,87,1116	0/0:29,0:28:84.27:0,84,1090	0/0:5,0:5:15.05:0,15,195
chr10	51629638	.	G	GGAA	3638.04	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-8.899;DP=594;FS=3.185;HRun=0;HaplotypeScore=92.7590;InbreedingCoeff=0.9986;MQ=90.36;MQ0=0;MQRankSum=-5.567;QD=57.75;ReadPosRankSum=2.499;VQSLOD=5.3476;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:75.20:0,75,1147	1/1:0,10:11:29.94:670,30,0	0/0:26,0:26:63.21:0,63,1003	0/0:21,0:21:50.24:0,50,717	0/0:18,0:18:54.16:0,54,830	0/0:24,0:24:69.21:0,69,1064	0/0:28,0:28:81.28:0,81,1317	0/0:30,0:30:84.27:0,84,1323	0/0:15,0:15:45.15:0,45,735	0/0:25,0:25:66.22:0,66,1050	0/0:14,0:14:39.13:0,39,629	0/0:17,0:17:51.17:0,51,832	0/0:24,0:24:69.24:0,69,1126	0/0:23,0:23:66.23:0,66,1078	1/1:4,25:32:78.27:1695,78,0	1/1:0,20:20:57.20:1273,57,0	0/0:22,0:22:57.19:0,57,931	0/0:9,0:9:27.09:0,27,441	0/0:17,0:17:45.14:0,45,708	0/0:16,0:16:45.15:0,45,734	0/0:30,0:30:87.28:0,87,1395	0/0:12,0:12:36.12:0,36,586	0/0:13,0:13:36.11:0,36,559	0/0:34,0:34:90.31:0,90,1469	0/0:19,0:19:51.17:0,51,833	0/0:25,0:25:66.23:0,66,1077	0/0:33,0:32:96.33:0,96,1566	0/0:8,0:8:24.08:0,24,388
chr10	51630052	.	T	TTA	1852.98	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=1.943;DP=736;FS=5.076;HRun=0;HaplotypeScore=88.5804;InbreedingCoeff=0.9975;MQ=93.19;MQ0=0;MQRankSum=-3.637;QD=45.19;ReadPosRankSum=1.615;VQSLOD=5.2393;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,38:41:99:1948,105,0	0/0:18,0:18:54.12:0,54,723	0/0:35,0:35:90.21:0,90,1191	0/0:28,0:28:80.60:0,81,1100	0/0:24,0:24:72.07:0,72,1029	0/0:26,0:26:75.25:0,75,1104	0/0:25,0:25:69.21:0,69,977	0/0:55,0:55:99:0,150,2171	0/0:24,0:24:72.24:0,72,1059	0/0:26,0:26:69.23:0,69,1012	0/0:22,0:22:66.21:0,66,952	0/0:18,0:18:51.15:0,51,715	0/0:35,0:35:96.31:0,96,1377	0/0:36,0:36:99:0,108,1571	0/0:32,0:32:96.30:0,96,1376	0/0:31,0:31:93.30:0,93,1334	0/0:26,0:26:72.15:0,72,988	0/0:19,0:19:57.16:0,57,815	0/0:17,0:17:48.14:0,48,671	0/0:25,0:25:72.24:0,72,1060	0/0:29,0:29:87.27:0,87,1243	0/0:14,0:14:33.09:0,33,465	0/0:27,0:27:78.26:0,78,1142	0/0:23,0:23:66.17:0,66,929	0/0:16,0:16:48.16:0,48,690	0/0:31,1:32:34.10:0,34,1225	0/0:24,0:24:69.23:0,69,1016	0/0:8,0:8:24.06:0,24,332
chr10	51630333	.	CGTGT	C	810.07	PASS	AB=0.799;AC=11;AF=0.212;AN=52;BaseQRankSum=0.720;DP=661;FS=3.603;HRun=0;HaplotypeScore=148.0506;InbreedingCoeff=0.3300;MQ=67.29;MQ0=8;MQRankSum=1.132;QD=4.07;ReadPosRankSum=0.829;VQSLOD=2.5945;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:24,4:28:0.95:204,0,1	0/1:6,0:17:10.94:47,0,11	./.	./.	0/0:17,0:20:14.93:0,15,469	1/1:12,5:18:15.04:216,15,0	0/1:12,11:23:1.38:305,0,1	0/0:26,0:26:18.24:0,18,170	0/0:25,0:26:39.11:0,39,799	0/0:31,0:31:17.38:0,17,441	0/0:20,0:24:20.51:0,21,288	0/0:24,0:25:47.44:0,47,808	0/0:22,0:25:50.32:0,50,862	0/0:23,0:25:47.86:0,48,950	0/1:14,0:24:0.03:0,0,0	1/1:13,0:24:3:28,3,0	0/1:23,2:25:99:99,0,608	0/0:14,0:16:25.84:0,26,398	0/1:11,1:12:35.11:35,0,197	0/0:21,0:21:35.83:0,36,694	0/0:28,0:31:35.03:0,35,519	0/0:17,0:18:14.76:0,15,203	0/0:19,0:24:28.72:0,29,274	0/0:42,1:45:68.60:0,69,1178	0/0:19,0:19:8.12:0,8,553	0/1:24,2:26:17.98:18,0,683	0/0:21,0:22:35.99:0,36,631	0/0:2,0:2:6.02:0,6,121
chr10	51630399	.	TATATAC	T	60.45	PASS	AB=1.000;AC=7;AF=0.130;AN=54;BaseQRankSum=2.935;DP=642;FS=2.435;HRun=0;HaplotypeScore=161.3614;InbreedingCoeff=0.7482;MQ=52.44;MQ0=6;MQRankSum=-2.950;QD=0.64;ReadPosRankSum=-0.815;VQSLOD=2.8561;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:32:32.83:0,33,846	1/1:6,15:21:3.33:38,3,0	0/1:19,0:3:0:0,0,0	./.	0/0:25,0:25:66.21:0,66,2018	0/0:18,0:18:39.13:0,39,1212	0/0:18,0:18:27.09:0,27,910	0/0:33,0:33:84.29:0,84,2479	0/0:27,0:27:63.15:0,63,1562	0/0:25,0:25:66.22:0,66,2103	0/0:15,0:15:24:0,24,815	0/0:24,0:24:50.93:0,51,1656	0/0:24,0:24:62.32:0,62,1725	0/0:26,0:26:57.19:0,57,1754	1/1:8,19:27:2.93:66,3,0	1/1:5,22:26:2.92:64,3,0	0/0:25,0:25:51.05:0,51,1402	0/0:16,0:15:36.12:0,36,1185	0/0:13,0:12:24.08:0,24,567	0/0:27,0:27:66.23:0,66,2106	0/0:27,0:27:60.21:0,60,1947	0/0:15,0:15:30.08:0,30,927	0/0:18,0:18:38.32:0,38,968	0/0:29,0:30:60.09:0,60,1869	0/0:24,0:24:57.19:0,57,1722	0/0:31,0:31:78.27:0,78,2585	0/0:19,0:19:44.94:0,45,1363	0/0:8,0:8:21.07:0,21,700
chr10	51630411	.	C	CAT	420.34	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-3.633;DP=614;FS=7.027;HRun=0;HaplotypeScore=111.9118;InbreedingCoeff=0.5931;MQ=53.98;MQ0=5;MQRankSum=0.179;QD=12.36;ReadPosRankSum=3.584;VQSLOD=2.8175;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,26:33:30.10:514,30,0	0/0:22,0:22:2.49:0,2,38	0/0:21,0:1:3:0,3,28	0/0:22,0:3:4.56:0,5,31	0/0:26,0:26:66.17:0,66,832	0/0:17,0:17:39.13:0,39,508	0/0:15,0:15:39.07:0,39,497	0/0:38,0:38:93.28:0,93,1174	0/0:26,0:26:54.01:0,54,668	0/0:23,0:23:66.18:0,66,830	0/0:11,0:11:30.08:0,30,380	0/0:23,0:23:54.17:0,54,709	0/0:26,0:26:66.15:0,66,831	0/0:21,0:21:57.17:0,57,729	0/0:26,0:26:5.85:0,6,56	0/0:26,0:25:11.74:0,12,114	0/0:23,0:23:45.15:0,45,585	0/0:18,0:17:51.14:0,51,652	0/0:9,0:8:18.04:0,18,209	0/0:25,0:25:66.21:0,66,866	0/0:25,0:25:66.21:0,66,848	0/0:11,0:11:27.09:0,27,355	0/0:17,0:17:36.11:0,36,462	0/0:27,0:27:66.21:0,66,864	0/0:24,0:24:54.15:0,54,692	0/0:32,0:32:96.30:0,96,1248	0/0:17,0:17:42.12:0,42,535	0/0:9,0:9:27.09:0,27,353
chr10	51630452	.	ATG	A	2659.02	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=10.032;DP=710;FS=0.000;HRun=0;HaplotypeScore=111.5451;InbreedingCoeff=0.9748;MQ=56.97;MQ0=9;MQRankSum=1.370;QD=24.85;ReadPosRankSum=5.740;VQSLOD=3.9771;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:33.03:0,33,509	0/0:14,0:14:8.53:0,9,153	0/0:42,0:13:27.06:0,27,399	0/0:28,0:7:11.93:0,12,167	0/0:32,0:32:95.67:0,96,1550	0/0:14,0:14:39.12:0,39,636	0/0:24,0:24:49.04:0,49,798	0/0:48,0:48:99:0,117,1883	0/0:28,0:28:66.19:0,66,1121	0/0:26,0:26:75.25:0,75,1254	0/0:15,0:15:45.15:0,45,763	1/1:1,24:25:57.18:748,57,0	1/1:2,27:29:69.22:905,69,0	0/0:30,0:30:87.27:0,87,1425	0/0:29,0:29:29.90:0,30,514	0/0:23,0:22:20.99:0,21,360	0/0:28,0:27:66.96:0,67,1032	0/0:29,0:28:76.37:0,76,1158	0/0:11,0:11:24.08:0,24,382	0/0:23,0:23:63.20:0,63,1040	0/0:34,0:33:90.29:0,90,1503	1/1:2,14:16:27:354,27,0	1/1:0,13:13:30.10:394,30,0	1/1:4,20:24:33:433,33,0	0/0:23,0:23:48.01:0,48,794	0/0:42,0:42:99:0,120,1909	0/0:23,0:22:63.19:0,63,1050	0/0:8,0:8:21.07:0,21,359
chr10	51630518	.	T	TGCG	984	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=5.317;DP=592;FS=4.626;HRun=0;HaplotypeScore=116.8688;InbreedingCoeff=0.8803;MQ=62.04;MQ0=1;MQRankSum=-0.536;QD=18.92;ReadPosRankSum=-2.306;VQSLOD=2.6890;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,12:16:0.25:67,0,0	1/1:2,11:13:11.66:275,12,0	0/0:22,0:15:41.63:0,42,631	0/0:12,0:6:6.54:0,7,65	0/0:31,0:31:93.29:0,93,1671	0/0:19,0:19:54.17:0,54,976	0/0:16,0:16:48.15:0,48,861	0/0:36,0:37:99:0,105,1846	0/0:22,0:22:60.21:0,60,1119	0/0:33,0:33:96.32:0,96,1758	0/0:23,0:23:69.23:0,69,1243	0/0:26,0:26:66.18:0,66,1142	0/0:24,0:24:60.21:0,60,1116	0/0:30,0:30:87.30:0,87,1619	1/1:5,5:10:17.54:302,18,0	1/1:1,12:13:20.60:483,21,0	0/0:16,0:15:42.14:0,42,782	0/0:27,0:27:81.28:0,81,1507	0/0:12,0:11:27.09:0,27,492	0/0:17,0:18:51.16:0,51,918	0/0:24,0:24:72.25:0,72,1341	0/0:17,0:17:39.13:0,39,726	0/0:18,0:18:45.15:0,45,836	0/0:23,0:24:42.01:0,42,780	0/0:20,0:20:48.15:0,48,893	0/0:34,0:34:99:0,102,1878	0/0:26,0:25:75.26:0,75,1390	0/0:6,0:6:15.05:0,15,268
chr10	51630534	.	ATG	A	163.16	PASS	AB=0.727;AC=7;AF=0.125;AN=56;BaseQRankSum=6.208;DP=578;FS=1.040;HRun=0;HaplotypeScore=104.5634;InbreedingCoeff=0.6073;MQ=61.18;MQ0=0;MQRankSum=-3.183;QD=2.67;ReadPosRankSum=-1.581;VQSLOD=2.0296;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:7,11:18:10.82:34,0,11	1/1:1,11:12:15.25:135,15,0	0/0:22,0:13:13.02:0,13,282	0/1:11,1:7:13.20:13,0,34	0/0:23,0:23:69.24:0,69,1185	0/0:21,0:21:63.18:0,63,1034	0/0:16,0:16:42.11:0,42,663	0/0:48,0:48:99:0,126,1941	0/0:19,0:19:39.10:0,39,605	0/0:27,0:27:75.22:0,75,1199	0/0:20,0:20:60.19:0,60,1001	0/0:27,0:27:72.21:0,72,1177	0/0:19,0:19:39.12:0,39,647	0/0:31,0:31:78.23:0,78,1266	0/1:3,4:7:0:0,0,0	1/1:4,8:12:10.49:108,10,0	0/0:14,0:14:36.10:0,36,561	0/0:31,0:30:72.07:0,72,1065	0/0:12,0:11:30.05:0,30,462	0/0:21,0:21:54.17:0,54,880	0/0:19,0:19:48.14:0,48,783	0/0:18,0:18:42.14:0,42,710	0/0:21,0:21:51.16:0,51,860	0/0:25,0:25:45.09:0,45,712	0/0:17,0:17:51.16:0,51,854	0/0:33,0:33:84.28:0,84,1396	0/0:27,0:26:66.14:0,66,1002	0/0:6,0:6:15.03:0,15,232
chr10	51630568	.	A	ATG	287.25	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=1.621;DP=540;FS=2.860;HRun=0;HaplotypeScore=86.7724;InbreedingCoeff=0.7335;MQ=63.22;MQ0=4;MQRankSum=-1.352;QD=5.75;ReadPosRankSum=-0.955;VQSLOD=2.7824;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:14.71:0,15,171	1/1:2,12:14:12.04:202,12,0	0/0:14,0:11:27.08:0,27,340	0/1:9,0:5:11.75:12,0,33	0/0:33,0:33:93.24:0,93,1137	0/0:20,0:20:54.15:0,54,678	0/0:15,0:15:42.12:0,42,525	0/0:48,0:48:99:0,111,1291	0/0:14,0:14:39.06:0,39,443	0/0:29,0:29:75.22:0,75,938	0/0:23,0:23:57.18:0,57,732	0/0:28,0:28:81.26:0,81,1041	0/0:13,0:13:30.08:0,30,371	0/0:26,0:26:66.21:0,66,848	1/1:1,11:12:3.01:51,3,0	1/1:5,8:11:9.03:152,9,0	0/0:10,0:10:27.06:0,27,330	0/0:20,0:20:48.11:0,48,598	0/0:16,0:16:42.12:0,42,526	0/0:15,0:15:45.13:0,45,565	0/0:23,0:23:63.20:0,63,808	0/0:12,0:12:33.10:0,33,411	0/0:21,0:21:56.85:0,57,702	0/0:17,0:17:42.14:0,42,540	0/0:19,0:19:45.15:0,45,578	0/0:22,0:22:60.18:0,60,747	0/0:25,0:24:63.16:0,63,779	0/0:5,0:5:12.04:0,12,154
chr10	51630681	.	AT	A	754.84	PASS	AB=1.000;AC=8;AF=0.143;AN=56;BaseQRankSum=7.809;DP=357;FS=4.937;HRun=6;HaplotypeScore=34.7845;InbreedingCoeff=0.7416;MQ=71.30;MQ0=0;MQRankSum=-3.320;QD=17.97;ReadPosRankSum=1.645;VQSLOD=2.6350;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:30.10:0,30,393	1/1:0,10:10:26.98:274,27,0	0/1:5,0:5:16.13:16,0,64	0/1:6,0:6:0.20:0,0,125	0/0:23,0:23:66.21:0,66,855	0/0:25,0:25:75.22:0,75,948	0/0:9,0:9:24.08:0,24,316	0/0:20,0:20:54.16:0,54,688	0/0:8,0:8:21.07:0,21,275	0/0:15,0:15:45.14:0,45,583	0/0:11,0:11:30.09:0,30,381	0/0:14,0:14:39.13:0,39,513	0/0:11,0:11:33.10:0,33,422	0/0:12,0:12:33.10:0,33,421	1/1:0,7:7:21.05:225,21,0	1/1:1,13:14:36.09:386,36,0	0/0:22,0:22:66.20:0,66,849	0/0:13,0:13:39.10:0,39,482	0/0:17,0:17:48.16:0,48,631	0/0:13,0:13:39.13:0,39,512	0/0:8,0:8:21.07:0,21,276	0/0:4,0:4:12.04:0,12,158	0/0:7,0:7:18.05:0,18,224	0/0:3,0:3:9.01:0,9,103	0/0:11,0:11:30.10:0,30,395	0/0:25,0:25:72.23:0,72,934	0/0:26,0:26:69.19:0,69,866	0/0:7,0:7:21.07:0,21,276
chr10	51631230	.	A	ATATACT	11553.47	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=16.261;DP=623;FS=7.670;HRun=0;HaplotypeScore=155.7156;InbreedingCoeff=0.9963;MQ=88.11;MQ0=0;MQRankSum=-16.772;QD=78.06;ReadPosRankSum=4.198;VQSLOD=5.8675;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,0:11:27.09:688,27,0	1/1:3,0:8:21.05:456,21,0	0/0:28,0:28:84.28:0,84,2039	0/0:23,0:23:63:0,63,1411	0/0:29,0:29:87.26:0,87,2082	0/0:28,0:28:84.26:0,84,2040	0/0:23,0:23:69.24:0,69,1735	0/0:30,0:30:87.28:0,87,2109	0/0:23,0:23:69.24:0,69,1735	0/0:37,0:37:99:0,108,2655	0/0:21,0:21:63.20:0,63,1547	1/1:1,21:22:66.23:2048,66,0	1/1:1,24:25:72.25:2277,72,0	0/0:24,0:24:72.25:0,72,1846	1/1:4,0:22:63.16:1451,63,0	1/1:5,0:21:56.75:1342,57,0	0/0:23,0:23:69.24:0,69,1694	1/1:0,8:8:24.08:775,24,0	0/0:25,0:25:75.26:0,75,1907	0/0:28,0:28:78.21:0,78,1763	0/0:29,0:29:87.28:0,87,2076	1/1:2,6:8:24.06:622,24,0	1/1:0,15:15:45.15:1420,45,0	1/1:2,6:8:15.05:472,15,0	0/0:25,0:25:75.24:0,75,1804	0/0:27,0:27:81.26:0,81,1956	0/0:35,0:35:99:0,105,2648	0/0:17,0:17:51.18:0,51,1306
chr10	51631231	.	G	GGGT	8479.34	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=17.979;DP=649;FS=11.184;HRun=0;HaplotypeScore=145.2509;InbreedingCoeff=0.9981;MQ=86.54;MQ0=0;MQRankSum=-17.513;QD=48.45;ReadPosRankSum=3.196;VQSLOD=6.5761;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,9:17:45.14:773,45,0	1/1:3,5:10:23.85:477,24,0	0/0:29,0:29:84.28:0,84,1440	0/0:22,0:22:50.35:0,50,864	0/0:29,0:29:84.29:0,84,1460	0/0:27,0:27:81.26:0,81,1389	0/0:23,0:23:69.24:0,69,1217	0/0:29,0:29:84.28:0,84,1430	0/0:23,0:23:69.24:0,69,1217	0/0:36,0:36:99:0,108,1879	0/0:20,0:20:60.21:0,60,1058	1/1:1,20:23:69.24:1220,69,0	1/1:4,24:28:84.29:1482,84,0	0/0:24,0:24:72.25:0,72,1270	1/1:6,17:24:48.26:1254,48,0	1/1:4,16:23:31.27:938,31,0	0/0:24,0:24:66.23:0,66,1160	1/1:3,8:11:33.11:607,33,0	0/0:26,0:26:75.24:0,75,1269	0/0:28,0:28:81.24:0,81,1312	0/0:29,0:29:87.28:0,87,1501	1/1:1,6:9:24.08:443,24,0	1/1:7,15:22:54.18:954,54,0	1/1:1,6:8:18.06:332,18,0	0/0:25,0:25:72.25:0,72,1266	0/0:27,0:27:81.28:0,81,1427	0/0:36,0:36:99:0,102,1794	0/0:17,0:17:51.17:0,51,899
chr10	51632084	.	G	GTGAC	8197.94	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=11.636;DP=781;FS=23.660;HRun=0;HaplotypeScore=139.6885;InbreedingCoeff=0.9912;MQ=83.92;MQ0=1;MQRankSum=-4.903;QD=61.18;ReadPosRankSum=1.477;VQSLOD=4.0396;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,44:53:99:3211,120,0	1/1:2,10:13:30.10:807,30,0	0/0:31,0:32:55.77:0,56,1278	0/0:52,0:42:46.84:0,47,1203	0/0:30,0:30:90.27:0,90,1643	0/0:36,0:36:99:0,108,1991	0/0:29,0:29:81.28:0,81,1538	0/0:29,0:29:84.28:0,84,1562	0/0:28,0:28:81.25:0,81,1474	0/0:33,0:33:93.31:0,93,1730	0/0:19,0:19:54.03:0,54,896	0/0:31,0:31:87.21:0,87,1576	0/0:21,0:21:63.20:0,63,1156	0/0:30,0:30:90.30:0,90,1667	1/1:3,33:36:84.29:2264,84,0	1/1:4,28:32:72.08:1916,72,0	0/0:28,0:28:81.26:0,81,1475	0/0:16,0:16:42.14:0,42,797	0/0:15,0:15:45.13:0,45,783	0/0:32,0:32:96.22:0,96,1747	0/0:12,0:12:33.10:0,33,597	0/0:19,0:19:51.17:0,51,968	0/0:32,0:32:87.28:0,87,1605	0/0:26,0:26:75.26:0,75,1398	0/0:33,0:33:96.33:0,96,1816	0/0:31,0:31:87.28:0,87,1585	0/0:27,0:26:69.14:0,69,1239	0/0:5,0:5:12.04:0,12,228
chr10	51632647	.	AG	A	1972.40	PASS	AB=0.864;AC=19;AF=0.339;AN=56;BaseQRankSum=-2.219;DP=595;FS=1.357;HRun=11;HaplotypeScore=88.6097;InbreedingCoeff=0.3914;MQ=74.67;MQ0=1;MQRankSum=-1.733;QD=7.42;ReadPosRankSum=3.738;VQSLOD=2.5151;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:85.71:0,86,353	0/0:13,0:13:24.11:0,24,99	0/0:20,0:20:0.01:0,0,133	0/0:10,0:11:15.51:0,16,159	0/1:18,2:20:46.31:46,0,157	0/0:19,1:20:11.44:0,11,318	0/1:23,3:26:1.21:1,0,371	0/0:19,1:21:2.25:0,2,214	0/0:17,0:17:20.49:0,20,409	0/0:15,0:15:12.03:0,12,128	1/1:3,2:5:5.96:49,6,0	1/1:7,18:25:35.90:295,36,0	1/1:8,28:37:64.92:523,65,0	0/0:34,3:37:4.78:0,5,419	0/0:28,0:28:69.70:0,70,288	0/0:36,0:36:88.52:0,89,367	0/0:24,0:24:37.30:0,37,542	0/0:13,0:13:29.93:0,30,260	0/1:6,3:9:31.27:31,0,100	0/1:16,2:18:3.64:4,0,147	0/1:18,3:22:22.41:22,0,167	1/1:8,15:25:49.88:379,50,0	1/1:6,9:15:22.67:178,23,0	1/1:6,27:34:60.21:602,60,0	0/1:19,4:23:13.21:13,0,277	0/0:18,0:18:15.04:0,15,160	0/0:20,0:20:12.73:0,13,322	0/1:5,1:6:9.60:10,0,113
chr10	51632653	.	G	GT	4070.51	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-14.202;DP=596;FS=4.922;HRun=0;HaplotypeScore=83.7566;InbreedingCoeff=0.9940;MQ=69.67;MQ0=1;MQRankSum=-1.903;QD=36.34;ReadPosRankSum=7.236;VQSLOD=3.0521;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,35:36:96.32:1304,96,0	1/1:0,11:11:27.09:368,27,0	0/0:14,0:13:35.99:0,36,379	0/0:11,0:11:31.73:0,32,323	0/0:22,0:22:50.67:0,51,477	0/0:21,0:21:59.97:0,60,658	0/0:29,0:29:71.71:0,72,772	0/0:25,0:25:60.70:0,61,632	0/0:17,0:17:51.05:0,51,616	0/0:14,0:14:32.99:0,33,347	0/0:8,0:8:14.92:0,15,115	0/0:24,0:24:47.61:0,48,347	0/0:35,0:35:85.99:0,86,605	0/0:26,0:26:66.03:0,66,717	1/1:0,28:28:78.26:1058,78,0	1/1:0,37:37:99:1341,99,0	0/0:23,0:23:66.13:0,66,814	0/0:14,0:14:27.89:0,28,279	0/0:13,0:13:32.94:0,33,316	0/0:18,0:18:41.81:0,42,384	0/0:18,0:17:32.21:0,32,356	0/0:27,0:27:73.58:0,74,502	0/0:18,0:18:39.58:0,40,287	0/0:36,0:36:99:0,101,730	0/0:23,0:23:57.01:0,57,623	0/0:19,0:19:47.89:0,48,473	0/0:21,0:21:51.01:0,51,580	0/0:8,0:8:23.96:0,24,255
chr10	51636825	.	TTATTTAATTCACC	T	18936.74	PASS	AB=0.512;AC=19;AF=0.339;AN=56;BaseQRankSum=18.688;DP=712;FS=0.000;HRun=0;HaplotypeScore=265.9833;InbreedingCoeff=0.8918;MQ=76.71;MQ0=1;MQRankSum=-18.770;QD=76.05;ReadPosRankSum=2.861;VQSLOD=4.0347;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,32:41:81.23:2978,81,0	1/1:1,13:14:26.98:1072,27,0	0/0:21,0:21:51.17:0,51,2730	0/0:16,0:16:48.03:0,48,1604	0/0:31,0:31:93.32:0,93,6079	0/0:27,0:26:81.26:0,81,4658	0/0:32,0:32:96.33:0,96,6042	0/0:38,0:38:99:0,111,5921	0/0:19,0:19:57.18:0,57,3623	0/0:34,0:34:99:0,102,6359	0/0:27,0:27:78.27:0,78,4583	1/1:4,27:31:69.24:2757,69,0	1/1:2,28:30:69.24:2740,69,0	0/0:32,0:32:93.29:0,93,5892	1/1:3,21:22:45.15:1815,45,0	0/1:1,21:22:90.84:2386,0,91	0/0:37,0:37:99:0,108,6750	1/1:4,10:14:15:547,15,0	0/0:26,0:26:78.26:0,78,4240	0/0:31,0:31:93.32:0,93,5754	0/0:25,0:25:72.22:0,72,4453	1/1:3,27:30:69.24:2531,69,0	1/1:4,15:19:38.83:1203,39,0	1/1:5,18:23:27.09:907,27,0	0/0:11,0:11:33.11:0,33,1758	0/0:25,0:25:72.24:0,72,4231	0/0:30,0:30:90.29:0,90,5560	0/0:1,0:1:3.01:0,3,201
chr10	51639623	.	T	TACAATC	11741.05	PASS	AB=0.963;AC=15;AF=0.268;AN=56;BaseQRankSum=-4.261;DP=639;FS=4.540;HRun=0;HaplotypeScore=143.7177;InbreedingCoeff=0.9070;MQ=86.06;MQ0=0;MQRankSum=-16.218;QD=63.47;ReadPosRankSum=0.522;VQSLOD=4.9268;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,18:28:63.22:2133,63,0	0/0:8,0:8:23.82:0,24,508	0/0:24,0:24:63.21:0,63,1377	0/0:24,0:24:51.10:0,51,1083	0/0:36,0:36:96.33:0,96,2253	0/0:23,0:23:63.22:0,63,1469	0/0:21,0:21:63.22:0,63,1484	0/0:36,0:36:96.32:0,96,2189	0/0:18,0:18:45.15:0,45,1064	0/0:28,0:28:84.28:0,84,1942	0/0:17,0:17:51.18:0,51,1203	1/1:7,12:19:45.15:1534,45,0	1/1:7,19:29:63.22:2115,63,0	0/1:25,1:26:31.41:31,0,1590	0/0:29,0:29:84.26:0,84,1869	0/0:28,0:27:84.28:0,84,1936	0/0:24,0:24:69.19:0,69,1531	1/1:3,11:14:36.12:1281,36,0	0/0:17,0:17:48.16:0,48,1091	0/0:17,0:17:51.18:0,51,1198	0/0:29,0:29:78.25:0,78,1788	1/1:3,25:30:72.25:2393,72,0	1/1:5,13:19:45.11:1403,45,0	1/1:6,13:20:26.30:850,26,0	0/0:18,0:18:51.18:0,51,1200	0/0:24,0:24:69.24:0,69,1596	0/0:27,0:27:75.22:0,75,1714	0/0:6,0:6:18.06:0,18,426
chr10	51640990	.	TCTCTCACACACACACACA	T	39.46	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=2.486;DP=535;FS=4.180;HRun=0;HaplotypeScore=205.5826;InbreedingCoeff=0.3566;MQ=47.67;MQ0=20;MQRankSum=-1.042;QD=0.79;ReadPosRankSum=-2.448;VQSLOD=2.4760;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:17,17:33:2.23:115,2,0	0/0:9,0:8:13.28:0,13,247	0/0:3,0:2:6.02:0,6,155	0/0:8,0:1:3.01:0,3,131	0/0:21,0:20:35.40:0,35,2140	0/0:23,0:23:43.48:0,43,2145	0/0:27,0:26:45.31:0,45,1591	0/0:14,0:12:27.02:0,27,1008	0/0:22,0:22:43.09:0,43,2370	0/0:29,0:27:69.19:0,69,3298	0/0:15,0:15:18.27:0,18,1590	0/0:17,0:16:21.07:0,21,1264	0/1:16,0:16:5.64:6,0,908	0/0:25,0:25:54.12:0,54,2417	0/0:24,0:24:14.52:0,15,186	0/0:29,0:29:35.87:0,36,1720	0/0:8,0:7:21.07:0,21,964	0/0:11,0:11:33.11:0,33,1421	0/0:14,0:13:34:0,34,1737	0/0:27,0:26:47.08:0,47,2871	0/0:26,0:24:39.12:0,39,2375	0/0:11,0:11:10.28:0,10,445	0/0:20,0:20:30.10:0,30,1243	0/0:19,0:18:21.39:0,21,1205	0/0:30,0:29:69.41:0,69,4303	0/0:23,0:21:31.69:0,32,2450	0/0:23,0:23:44.98:0,45,2499	0/0:7,0:5:15.05:0,15,439
chr10	51640994	.	T	TCACATACA	1602.21	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=7.810;DP=551;FS=28.917;HRun=0;HaplotypeScore=145.5694;InbreedingCoeff=0.1845;MQ=47.17;MQ0=21;MQRankSum=0.686;QD=7.67;ReadPosRankSum=-1.730;VQSLOD=1.0793;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:31,0:32:19.72:20,0,56	1/1:2,6:10:4.26:60,4,0	0/0:3,0:2:3.01:0,3,65	0/0:12,0:2:2.22:0,2,7	0/0:20,0:19:36.49:0,36,633	0/0:25,0:25:39.52:0,40,769	0/0:27,0:26:34.56:0,35,517	0/0:16,0:14:32.87:0,33,473	0/0:20,0:20:41.23:0,41,858	0/0:27,0:25:71.66:0,72,970	0/0:15,0:15:29.91:0,30,465	0/1:22,0:21:23.91:315,0,24	0/1:21,0:21:90.98:286,0,91	0/0:24,0:24:44.02:0,44,869	1/1:14,1:26:4.79:14,5,0	1/1:31,0:32:16.84:616,17,0	0/0:8,0:7:20.99:0,21,381	0/1:11,0:11:41.42:41,0,136	0/0:14,0:13:35.77:0,36,491	0/0:25,0:24:45.99:0,46,771	0/0:26,0:24:36.04:0,36,655	0/1:13,0:13:38.58:42,0,39	0/1:19,0:19:86.81:202,0,87	0/1:21,0:20:93.79:164,0,94	0/0:29,0:28:72.48:0,72,1392	0/0:23,0:21:57.15:0,57,821	0/0:21,0:21:46.16:0,46,748	0/0:7,0:5:8.93:0,9,122
chr10	51644797	.	GTC	G	7986.34	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=13.822;DP=648;FS=4.292;HRun=0;HaplotypeScore=77.9926;InbreedingCoeff=0.9950;MQ=82.03;MQ0=3;MQRankSum=-3.552;QD=36.80;ReadPosRankSum=4.065;VQSLOD=6.8831;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,28:28:78.26:1148,78,0	1/1:0,5:5:12.04:177,12,0	0/0:24,0:24:69.24:0,69,1230	0/0:14,0:14:27.53:0,28,447	0/0:38,0:38:99:0,114,2089	0/0:21,0:21:57.20:0,57,1067	0/0:21,0:21:63.20:0,63,1149	0/0:33,0:33:96.32:0,96,1727	0/0:28,0:28:84.27:0,84,1540	0/0:39,0:39:99:0,108,2000	0/0:22,0:22:66.23:0,66,1234	1/1:1,23:24:63.21:927,63,0	1/1:0,22:22:60.20:883,60,0	0/0:22,0:22:63.22:0,63,1178	1/1:1,26:27:72.24:1060,72,0	1/1:2,37:38:93.31:1369,93,0	0/0:22,0:22:63.14:0,63,1052	1/1:0,14:14:30.10:442,30,0	0/0:13,0:13:36.11:0,36,640	0/0:33,0:33:99:0,99,1796	0/0:9,0:9:27.09:0,27,506	1/1:0,17:16:36.12:529,36,0	1/1:0,22:22:54.01:792,54,0	1/1:2,16:18:45.15:660,45,0	0/0:29,0:29:84.29:0,84,1566	0/0:21,0:21:63.22:0,63,1172	0/0:29,0:29:87.29:0,87,1595	0/0:13,0:13:33.11:0,33,617
chr10	51645113	.	AG	A	411.65	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.178;DP=545;FS=0.000;HRun=2;HaplotypeScore=48.9083;InbreedingCoeff=0.7712;MQ=69.74;MQ0=0;MQRankSum=-0.650;QD=29.40;ReadPosRankSum=1.494;VQSLOD=3.1275;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:45.14:0,45,654	0/0:4,0:4:12.04:0,12,180	0/0:13,0:12:35.33:0,35,489	0/0:2,0:2:2.44:0,2,44	0/0:38,0:38:99:0,111,1633	0/0:29,0:29:84.25:0,84,1216	0/0:17,0:17:51.13:0,51,704	0/0:35,0:35:99:0,105,1556	0/0:9,0:9:27.07:0,27,381	0/0:27,0:27:78.26:0,78,1151	0/0:30,0:30:87.27:0,87,1252	0/0:19,0:19:54.17:0,54,788	0/0:23,0:23:69.13:0,69,965	0/0:15,0:15:45.13:0,45,634	0/0:16,0:16:48.09:0,48,685	0/0:24,0:24:72.22:0,72,1040	0/0:16,0:16:45.15:0,45,674	1/1:0,14:14:39.13:506,39,0	0/0:26,0:26:75.21:0,75,1061	0/0:34,0:34:99:0,102,1526	0/0:8,0:8:24.08:0,24,360	0/0:6,0:6:18.06:0,18,270	0/0:19,0:19:48.15:0,48,699	0/0:3,0:3:9.03:0,9,135	0/0:39,0:39:99:0,117,1696	0/0:25,0:25:75.22:0,75,1099	0/0:31,0:31:93.30:0,93,1368	0/0:8,0:8:24.08:0,24,359
chr10	51645414	.	GA	G	3097.49	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=13.957;DP=716;FS=6.858;HRun=7;HaplotypeScore=82.2568;InbreedingCoeff=0.9979;MQ=89.01;MQ0=0;MQRankSum=-2.756;QD=24.58;ReadPosRankSum=2.644;VQSLOD=4.1539;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:77.89:0,78,928	0/0:10,0:10:27.09:0,27,340	0/0:30,0:30:66.20:0,66,808	0/0:22,0:22:51.15:0,51,625	0/0:28,0:28:84.26:0,84,1044	0/0:38,0:38:99:0,114,1396	0/0:28,0:28:72.23:0,72,906	0/0:33,0:33:81.25:0,81,1007	0/0:17,0:17:51.16:0,51,631	0/0:28,0:28:78.25:0,78,981	0/0:19,0:19:51.16:0,51,641	1/1:2,33:35:93.21:949,93,0	1/1:3,20:23:57.13:582,57,0	0/0:30,0:30:84.26:0,84,1045	0/0:29,0:29:78.25:0,78,981	0/0:21,0:21:57.18:0,57,717	0/0:19,0:19:57.14:0,57,696	0/0:20,0:19:54.17:0,54,679	0/0:18,0:18:45.14:0,45,566	0/0:41,0:41:99:0,111,1396	0/0:29,0:29:78.25:0,78,981	1/1:1,24:25:60.13:610,60,0	1/1:1,14:15:42.10:429,42,0	1/1:2,26:28:69.15:704,69,0	0/0:27,0:27:75.20:0,75,913	0/0:32,0:32:81.23:0,81,983	0/0:38,0:38:99:0,114,1421	0/0:6,0:6:18.06:0,18,226
chr10	51645643	.	TGTCCACCTACAGAAA	T	11921.17	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=14.907;DP=702;FS=11.705;HRun=0;HaplotypeScore=292.8321;InbreedingCoeff=0.9993;MQ=79.39;MQ0=0;MQRankSum=-15.159;QD=95.37;ReadPosRankSum=4.540;VQSLOD=2.9270;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,126,8217	0/0:14,0:14:42.12:0,42,2938	0/0:22,0:22:57.20:0,57,3240	0/0:17,0:17:45.63:0,46,2502	0/0:26,0:26:78.25:0,78,5040	0/0:26,0:26:78.25:0,78,5466	0/0:16,0:16:48.15:0,48,3131	0/0:34,0:34:99:0,99,6291	0/0:20,0:20:60.21:0,60,4227	0/0:27,0:27:78.27:0,78,5653	0/0:23,0:23:66.23:0,66,4710	1/1:6,20:26:57.20:2564,57,0	1/1:2,20:22:60.21:2699,60,0	0/0:23,0:23:66.23:0,66,4428	0/0:27,0:27:81.28:0,81,5646	0/0:31,0:31:93.32:0,93,6271	0/0:31,0:31:90.31:0,90,6463	0/0:14,0:14:42.14:0,42,3033	0/0:23,0:23:66.23:0,66,4387	0/0:37,0:37:99:0,105,7405	0/0:27,0:27:81.28:0,81,5483	1/1:4,28:32:72.25:3238,72,0	1/1:3,23:26:54.19:2425,54,0	1/1:4,15:19:24.08:995,24,0	0/0:35,0:35:99:0,105,7094	0/0:20,0:20:60.21:0,60,4321	0/0:32,0:31:93.32:0,93,6581	0/0:9,0:9:27.09:0,27,1565
chr10	51648361	.	A	ATTAT	889.11	PASS	AB=1.000;AC=16;AF=0.296;AN=54;BaseQRankSum=7.487;DP=455;FS=0.771;HRun=0;HaplotypeScore=82.2787;InbreedingCoeff=0.6440;MQ=64.06;MQ0=0;MQRankSum=-4.694;QD=12.52;ReadPosRankSum=-2.087;VQSLOD=2.7007;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:15,0:15:9.84:51,0,10	1/1:3,0:3:5.99:50,6,0	0/0:8,0:8:0.04:0,0,112	0/0:6,0:6:8.99:0,9,76	0/0:29,0:29:63.08:0,63,839	0/0:19,0:19:54.14:0,54,818	0/0:10,0:10:27.05:0,27,363	0/0:31,0:31:57.05:0,57,613	0/0:15,0:15:30.05:0,30,412	0/0:32,0:32:74.25:0,74,1099	0/0:34,0:34:74.26:0,74,1239	1/1:2,4:6:3.01:71,3,0	1/1:5,4:9:9.03:204,9,0	0/0:24,0:24:66.12:0,66,938	1/1:6,6:12:9.03:206,9,0	1/1:4,6:10:15.05:357,15,0	0/0:27,0:27:60.96:0,61,823	0/1:11,0:11:29.23:35,0,29	0/0:13,0:13:15.05:0,15,251	0/0:21,0:21:54.10:0,54,761	0/0:6,0:6:12.04:0,12,201	1/1:2,0:2:6.01:68,6,0	1/1:1,2:3:2.94:18,3,0	./.	0/0:33,0:33:72.19:0,72,1091	0/0:27,0:27:63.18:0,63,973	0/0:34,0:34:81.14:0,81,1120	0/0:14,0:14:33.11:0,33,510
chr10	51648376	.	ATTTG	A	229.45	PASS	AB=0.929;AC=8;AF=0.154;AN=52;BaseQRankSum=6.134;DP=442;FS=4.856;HRun=0;HaplotypeScore=76.5394;InbreedingCoeff=0.2655;MQ=56.75;MQ0=1;MQRankSum=-5.562;QD=4.88;ReadPosRankSum=-2.717;VQSLOD=1.0552;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:5,11:16:17.82:187,18,0	./.	0/0:8,0:7:4.94:0,5,157	0/0:5,0:5:3:0,3,28	0/0:27,0:27:63.13:0,63,1250	0/0:23,0:23:66.12:0,66,1250	0/0:15,0:15:38.98:0,39,634	0/0:31,0:31:57.09:0,57,797	0/0:12,0:12:30.07:0,30,589	0/0:28,0:28:66.21:0,66,1519	0/0:38,0:38:93.20:0,93,1904	0/1:4,0:4:26.21:34,0,26	0/1:7,0:7:5.98:6,0,89	0/0:23,0:23:54.14:0,54,1161	0/0:7,0:7:9.03:0,9,115	0/1:9,0:9:28.19:28,0,148	0/0:31,0:31:63.11:0,63,1174	0/1:6,4:10:51.48:88,0,51	0/0:10,0:9:27.02:0,27,509	0/0:25,0:25:60.12:0,60,1137	0/0:4,0:4:12.04:0,12,296	0/0:2,0:2:3.01:0,3,45	1/1:1,0:1:2.92:17,3,0	./.	0/0:32,0:32:84.16:0,84,1580	0/0:25,0:25:69.18:0,69,1439	0/0:32,0:32:51.08:0,51,1318	0/0:14,0:14:36.11:0,36,673
chr10	51649763	.	TTG	T	831.64	PASS	AB=0.873;AC=17;AF=0.327;AN=52;BaseQRankSum=5.856;DP=636;FS=0.000;HRun=0;HaplotypeScore=97.9562;InbreedingCoeff=0.4170;MQ=62.91;MQ0=8;MQRankSum=0.788;QD=3.68;ReadPosRankSum=2.167;VQSLOD=2.0352;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:32:8.40:0,8,283	0/1:6,0:7:5.89:10,0,6	./.	./.	0/0:27,0:27:20.34:0,20,255	1/1:15,8:22:11.73:94,12,0	1/1:10,4:19:23.23:167,23,0	0/0:21,0:21:14.81:0,15,100	0/0:24,0:23:6.50:0,6,431	0/1:20,3:22:9.70:10,0,187	0/0:21,0:21:20.50:0,20,216	0/0:16,0:22:14.76:0,15,128	0/0:18,0:23:3:0,3,26	0/0:27,0:27:10.45:0,10,283	1/1:10,9:22:27.04:238,27,0	0/1:10,16:29:43.72:322,0,44	1/1:17,0:24:11.34:56,11,0	1/1:8,1:15:8.69:61,9,0	1/1:18,0:18:4.66:19,5,0	0/0:20,0:20:13.74:0,14,306	0/0:29,0:30:17.92:0,18,197	0/0:18,0:18:2.93:0,3,27	0/0:21,0:21:2.99:0,3,40	0/0:20,0:25:2.90:0,3,26	0/1:26,0:25:9.35:9,0,318	0/0:34,0:33:38.86:0,39,445	0/1:16,0:15:17.17:17,0,165	0/0:16,0:15:27.02:0,27,347
chr10	51649985	.	CTGTGTGTGTGTG	C	456.30	PASS	AB=0.751;AC=11;AF=0.204;AN=54;BaseQRankSum=6.106;DP=748;FS=6.852;HRun=0;HaplotypeScore=223.8676;InbreedingCoeff=0.4268;MQ=68.02;MQ0=21;MQRankSum=-0.424;QD=2.87;ReadPosRankSum=0.219;VQSLOD=1.9649;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:43:32.93:0,33,277	1/1:4,3:7:3.01:103,3,0	./.	0/0:42,0:26:10.36:0,10,63	0/0:27,0:24:29.98:0,30,512	0/0:24,0:25:30.10:0,30,550	0/0:33,0:36:54.11:0,54,849	0/0:30,0:29:39.99:0,40,511	0/0:22,0:22:24.02:0,24,617	0/0:12,0:13:17.98:0,18,252	0/0:18,0:17:12.04:0,12,283	0/1:15,0:20:3.06:3,0,72	0/0:12,0:22:8.62:0,9,110	0/0:21,0:20:22:0,22,771	1/1:14,11:26:1.48:191,1,0	0/1:9,21:32:25.91:101,0,26	0/0:33,0:32:53.20:0,53,1335	1/1:28,0:26:2.55:115,3,0	0/0:15,0:14:18.04:0,18,364	0/0:22,0:22:29.45:0,29,423	0/0:56,0:58:51.09:0,51,814	0/1:22,0:23:35.94:51,0,36	1/1:14,0:19:2.99:25,3,0	0/0:17,0:33:17.44:0,17,189	0/0:21,0:20:27.06:0,27,522	0/0:25,0:22:23.86:0,24,320	0/0:29,0:29:44.94:0,45,1057	0/0:5,0:5:8.95:0,9,127
chr10	51650005	.	GTGTGTGTGTGTGTGTGTGTGTGTGTC	G	150.18	PASS	AB=0.798;AC=2;AF=0.036;AN=56;BaseQRankSum=1.909;DP=717;FS=0.000;HRun=0;HaplotypeScore=326.6088;InbreedingCoeff=-0.0424;MQ=50.41;MQ0=35;MQRankSum=-1.089;QD=2.73;ReadPosRankSum=0.840;VQSLOD=1.8014;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:48:90.05:0,90,3173	0/0:10,0:10:15.05:0,15,613	0/0:19,0:4:8.94:0,9,86	0/0:21,0:8:14.63:0,15,199	0/0:29,0:26:42.11:0,42,1562	0/0:19,0:17:39.10:0,39,1421	0/0:36,0:34:68.28:0,68,2477	0/0:28,0:27:73.94:0,74,1300	0/0:21,0:19:39.13:0,39,2222	0/0:17,0:16:36.99:0,37,1126	0/0:20,0:19:21.07:0,21,1144	0/0:19,0:18:31.88:0,32,1577	0/0:25,0:24:45.51:0,46,1460	0/0:19,0:18:37.04:0,37,2076	0/1:21,0:21:35.30:35,0,374	0/0:32,0:31:24.91:0,25,496	0/0:34,0:32:74.28:0,74,4260	0/1:11,23:31:99:204,0,159	0/0:15,0:12:36.10:0,36,1495	0/0:21,0:21:51.15:0,51,1775	0/0:58,0:54:81.18:0,81,2906	0/0:25,0:23:48.65:0,49,1057	0/0:15,0:15:15.04:0,15,513	0/0:37,0:35:45.15:0,45,1914	0/0:23,0:21:36.09:0,36,1410	0/0:30,0:25:66.19:0,66,2508	0/0:29,0:26:63.67:0,64,3086	0/0:6,0:4:12.04:0,12,716
chr10	51652531	.	TTTG	T	3011.97	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=11.339;DP=678;FS=52.659;HRun=0;HaplotypeScore=91.5788;InbreedingCoeff=0.9962;MQ=73.27;MQ0=0;MQRankSum=-3.088;QD=41.26;ReadPosRankSum=-0.003;VQSLOD=2.1070;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:90.31:0,90,2051	1/1:0,8:8:21.07:358,21,0	0/0:11,0:11:32.98:0,33,664	0/0:17,0:17:39.13:0,39,837	0/0:27,0:27:81.28:0,81,1837	0/0:33,0:33:93.32:0,93,2124	0/0:22,0:22:63.20:0,63,1376	0/0:40,0:40:99:0,117,2627	0/0:30,0:30:90.31:0,90,2075	0/0:29,0:29:81.28:0,81,1834	0/0:30,0:30:90.31:0,90,2074	0/0:20,0:20:57.20:0,57,1290	0/0:38,0:38:99:0,105,2348	0/0:29,0:29:87.30:0,87,1982	1/1:1,37:38:96.27:1579,96,0	1/1:0,27:27:75.19:1217,75,0	0/0:13,0:13:33.11:0,33,761	0/0:28,0:28:69.19:0,69,1530	0/0:18,0:18:51.12:0,51,1083	0/0:27,0:27:75.26:0,75,1669	0/0:25,0:25:72.25:0,72,1660	0/0:21,0:21:57.20:0,57,1291	0/0:23,0:23:66.23:0,66,1522	0/0:8,0:8:24.08:0,24,553	0/0:27,0:27:78.27:0,78,1799	0/0:23,0:23:66.23:0,66,1500	0/0:28,0:27:81.28:0,81,1865	0/0:7,0:7:21.07:0,21,484
chr10	51653674	.	GA	G	7778.90	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=20.363;DP=745;FS=0.630;HRun=1;HaplotypeScore=143.4751;InbreedingCoeff=0.9953;MQ=74.34;MQ0=0;MQRankSum=-17.827;QD=36.69;ReadPosRankSum=1.960;VQSLOD=4.5007;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,144,2252	1/1:0,13:13:39.13:543,39,0	0/0:16,0:16:48.16:0,48,744	0/0:17,0:17:43.99:0,44,674	0/0:28,0:28:84.29:0,84,1338	0/0:23,0:23:66.21:0,66,1031	0/0:20,0:20:60.20:0,60,955	0/0:46,0:46:99:0,138,2166	0/0:38,0:38:99:0,114,1823	0/0:49,0:49:99:0,147,2323	0/0:28,0:28:84.28:0,84,1314	1/1:0,26:27:75.23:1024,75,0	1/1:0,36:37:99:1453,105,0	0/0:38,0:38:99:0,114,1815	1/1:0,18:18:51.15:693,51,0	1/1:1,28:29:33.29:1040,33,0	1/1:0,17:17:48.15:654,48,0	1/1:0,7:7:12.04:168,12,0	0/0:20,0:20:60.19:0,60,938	0/0:27,0:27:81.28:0,81,1295	0/0:15,0:15:45.13:0,45,694	1/1:0,25:25:63.21:875,63,0	1/1:0,25:25:66.22:919,66,0	1/1:0,14:14:30.10:410,30,0	0/0:30,0:30:90.29:0,90,1414	0/0:39,0:39:99:0,117,1871	0/0:38,0:38:99:0,114,1762	0/0:12,0:12:36.12:0,36,560
chr10	51653911	.	CTGAA	C	9198.27	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=15.760;DP=811;FS=3.277;HRun=0;HaplotypeScore=134.3423;InbreedingCoeff=0.9408;MQ=73.11;MQ0=2;MQRankSum=-3.139;QD=30.56;ReadPosRankSum=6.971;VQSLOD=4.2817;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,18:22:45.15:722,45,0	1/1:6,10:16:27.09:450,27,0	0/0:23,1:24:1.16:0,1,981	0/0:30,0:29:48.12:0,48,930	0/0:43,0:43:96.31:0,96,2209	0/0:28,1:29:16.27:0,16,1429	0/0:24,0:24:63.22:0,63,1530	0/0:34,0:34:60.19:0,60,1350	0/0:35,0:35:81.26:0,81,1800	0/0:41,0:41:99:0,105,2558	0/0:21,0:21:36.12:0,36,883	1/1:1,21:22:54.18:899,54,0	1/1:12,27:39:63.22:1049,63,0	0/0:34,0:34:78.25:0,78,1822	1/1:5,23:28:48.16:799,48,0	1/1:11,33:44:69.24:1149,69,0	1/1:3,21:24:48.16:799,48,0	1/1:4,8:11:21.07:350,21,0	0/0:28,0:28:57.20:0,57,1361	0/0:38,0:38:93.31:0,93,2241	0/0:18,0:18:39.13:0,39,937	1/1:5,27:32:63.21:1034,63,0	1/1:5,21:26:51.07:849,51,0	1/1:10,26:35:66.23:1099,66,0	0/0:25,0:25:54.16:0,54,1281	0/0:39,0:39:96.33:0,96,2368	0/0:44,0:44:99:0,105,2575	0/0:3,0:3:2.99:0,3,24
chr10	51654224	.	AT	A	2257.96	PASS	AB=0.947;AC=7;AF=0.125;AN=56;BaseQRankSum=10.480;DP=811;FS=11.415;HRun=9;HaplotypeScore=81.6798;InbreedingCoeff=0.8325;MQ=71.06;MQ0=1;MQRankSum=0.919;QD=18.06;ReadPosRankSum=1.766;VQSLOD=3.1674;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:37:99:0,99,1121	1/1:2,12:14:36.02:329,36,0	0/1:16,1:15:25.22:25,0,154	0/0:12,0:11:15:0,15,152	0/0:30,1:31:59.78:0,60,933	0/0:28,0:28:72.21:0,72,831	0/0:19,0:19:54.15:0,54,614	0/0:42,0:42:99:0,108,1211	0/0:30,0:30:87.24:0,87,988	0/0:49,0:49:99:0,138,1586	0/0:14,0:14:33.10:0,33,379	0/0:32,0:32:81.20:0,81,920	0/0:41,0:41:99:0,108,1234	0/0:33,0:33:78.13:0,78,881	1/1:5,47:52:99:1208,132,0	1/1:5,36:41:64.43:844,64,0	0/0:24,0:24:66.18:0,66,751	0/0:13,0:13:36.11:0,36,412	0/0:19,0:19:42.12:0,42,485	0/0:30,0:30:75.21:0,75,856	0/0:22,0:22:63.16:0,63,700	0/0:32,0:32:90.24:0,90,1014	0/0:29,0:29:78.23:0,78,900	0/0:24,0:24:66.20:0,66,762	0/0:23,0:23:63.18:0,63,719	0/0:48,1:49:99:0,102,1427	0/0:41,0:41:99:0,111,1257	0/0:11,0:11:30.09:0,30,346
chr10	51654490	.	T	TGC	7626.31	PASS	AB=0.603;AC=19;AF=0.339;AN=56;BaseQRankSum=20.201;DP=941;FS=8.851;HRun=0;HaplotypeScore=205.0865;InbreedingCoeff=0.9186;MQ=53.01;MQ0=6;MQRankSum=-13.939;QD=24.44;ReadPosRankSum=3.344;VQSLOD=5.0208;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:96.73:0,97,1456	1/1:9,17:26:51.42:731,51,0	0/0:47,0:23:56.26:0,56,810	0/0:49,0:29:54.12:0,54,724	0/0:31,0:31:90.11:0,90,1254	0/0:27,0:27:81.24:0,81,1263	0/0:32,0:32:90.18:0,90,1337	0/0:42,0:39:99:0,105,1550	0/0:35,0:35:99:0,101,1527	0/0:41,0:41:99:0,120,1796	0/0:28,0:28:81.22:0,81,1223	1/1:11,22:33:69.17:798,69,0	1/1:4,38:42:99:1198,105,0	0/0:33,0:33:96.21:0,96,1511	1/1:8,39:47:80.88:1492,81,0	0/1:12,23:35:37.90:820,0,38	1/1:17,12:28:18.94:314,19,0	1/1:7,10:17:20.44:406,20,0	0/0:21,0:21:63.14:0,63,925	0/0:29,0:29:87.27:0,87,1360	0/0:80,0:79:99:0,217,3292	1/1:6,17:23:60:679,60,0	1/1:8,25:33:66.14:751,66,0	1/1:9,18:27:44.43:437,44,0	0/0:20,0:20:60.20:0,60,971	0/0:37,0:36:99:0,108,1659	0/0:23,0:23:69.22:0,69,1080	0/0:15,0:15:42.11:0,42,634
chr10	51654491	.	A	ATG	7072.61	PASS	AB=0.665;AC=18;AF=0.321;AN=56;BaseQRankSum=20.052;DP=937;FS=12.865;HRun=0;HaplotypeScore=209.7504;InbreedingCoeff=0.8063;MQ=52.82;MQ0=6;MQRankSum=-12.800;QD=22.60;ReadPosRankSum=4.787;VQSLOD=3.8814;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,103,1577	1/1:8,16:25:47.49:671,47,0	0/0:47,0:22:59.67:0,60,880	0/0:47,0:29:56.20:0,56,821	0/0:30,0:30:90.27:0,90,1393	0/0:27,0:27:81.28:0,81,1313	0/0:32,0:32:90.23:0,90,1422	0/0:42,0:39:99:0,108,1694	0/0:35,0:35:99:0,101,1585	0/0:40,0:40:99:0,117,1897	0/0:28,0:28:81.25:0,81,1265	1/1:12,22:34:68.61:762,69,0	1/1:4,38:42:92.81:1157,93,0	0/0:32,0:32:93.23:0,93,1513	1/1:7,39:46:94.54:1482,95,0	0/1:14,23:37:22.85:803,0,23	0/1:18,12:29:16.27:256,0,16	1/1:7,10:17:2.49:334,2,0	0/0:21,0:21:63.21:0,63,1019	0/0:28,0:28:84.27:0,84,1343	0/0:79,0:78:99:0,217,3442	1/1:5,17:22:25.84:577,26,0	1/1:9,24:34:54.87:668,55,0	1/1:8,18:26:21.18:362,21,0	0/0:21,0:21:60.20:0,60,978	0/0:37,0:36:99:0,108,1732	0/0:23,0:23:69.24:0,69,1115	0/0:15,0:15:42.14:0,42,678
chr10	51654493	.	A	ATG	5772.42	PASS	AB=0.867;AC=17;AF=0.304;AN=56;BaseQRankSum=20.108;DP=952;FS=9.074;HRun=0;HaplotypeScore=217.4771;InbreedingCoeff=0.7345;MQ=52.60;MQ0=11;MQRankSum=-11.832;QD=18.15;ReadPosRankSum=4.179;VQSLOD=3.9806;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,101,1555	1/1:22,2:24:47.72:537,48,0	0/0:50,0:21:60.22:0,60,903	0/0:46,0:26:56.70:0,57,805	0/0:27,0:27:81.28:0,81,1305	0/0:27,0:27:81.28:0,81,1313	0/0:31,0:31:84.23:0,84,1356	0/0:46,0:43:99:0,114,1784	0/0:35,0:35:97.88:0,98,1564	0/0:41,0:40:99:0,120,1925	0/0:28,0:28:81.28:0,81,1304	1/1:30,1:31:69.10:714,69,0	1/1:47,0:47:99:953,105,0	0/0:32,0:32:93.23:0,93,1514	1/1:46,1:47:78.50:1054,79,0	0/1:36,2:39:25.79:560,0,26	0/1:20,2:31:78.51:248,0,79	0/1:16,1:17:42.40:290,0,42	0/0:22,0:22:66.22:0,66,1060	0/0:28,0:28:84.29:0,84,1368	0/0:80,0:79:99:0,214,3443	1/1:20,1:21:53.84:494,54,0	1/1:32,1:34:65.52:620,66,0	1/1:26,0:26:8.18:302,8,0	0/0:22,0:22:61.28:0,61,1021	0/0:38,0:37:99:0,108,1759	0/0:23,0:23:69.24:0,69,1119	0/0:18,0:18:54.13:0,54,799
chr10	51654521	.	AAC	A	1918.35	PASS	AB=0.913;AC=13;AF=0.232;AN=56;BaseQRankSum=11.834;DP=962;FS=5.369;HRun=0;HaplotypeScore=222.7692;InbreedingCoeff=0.8896;MQ=48.58;MQ0=39;MQRankSum=-7.105;QD=9.27;ReadPosRankSum=-3.114;VQSLOD=2.1314;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:50.49:0,50,1083	0/0:23,0:23:28.91:0,29,534	0/0:68,3:12:17.42:0,17,227	0/0:60,1:12:15.04:0,15,219	0/0:22,0:22:51.12:0,51,788	0/0:33,0:32:64.54:0,65,1091	0/0:38,0:37:87.29:0,87,1422	0/0:55,0:50:99:0,99,1601	0/0:31,0:31:67.94:0,68,1071	0/0:31,0:29:65.50:0,66,1050	0/0:20,0:19:42.14:0,42,711	1/1:19,18:36:28.22:387,28,0	1/1:19,21:40:58.21:522,58,0	0/0:35,0:35:83.46:0,83,1312	0/0:37,0:37:72.83:0,73,978	0/0:34,0:34:58.73:0,59,775	1/1:20,6:25:44.73:424,45,0	0/1:19,2:20:23.17:218,0,23	0/0:28,0:23:54.04:0,54,835	0/0:20,0:20:16.32:0,16,637	0/0:82,0:79:99:0,200,3173	1/1:10,15:25:17.91:176,18,0	1/1:12,18:29:17.70:141,18,0	1/1:21,7:28:26.73:239,27,0	0/0:17,0:17:34.59:0,35,768	0/0:30,0:28:69.19:0,69,1109	0/0:21,0:22:54.18:0,54,899	0/0:18,0:18:48.16:0,48,794
chr10	51654548	.	T	TAC	144.27	PASS	AB=0.959;AC=7;AF=0.135;AN=52;BaseQRankSum=-0.153;DP=846;FS=2.237;HRun=0;HaplotypeScore=180.7210;InbreedingCoeff=-0.1616;MQ=47.11;MQ0=40;MQRankSum=-1.729;QD=0.81;ReadPosRankSum=-3.809;VQSLOD=1.7634;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:15.57:0,16,99	0/1:14,0:13:26.39:26,0,27	./.	./.	0/0:17,0:18:20.39:0,20,170	0/0:30,0:28:17.96:0,18,131	0/0:36,0:34:27.09:0,27,244	0/1:42,0:35:3.58:4,0,36	0/0:33,0:33:41.08:0,41,364	0/0:20,0:20:13.97:0,14,77	0/0:19,0:18:3:0,3,32	0/0:35,0:35:29.69:0,30,179	0/0:34,0:34:9.19:0,9,131	0/1:18,12:30:13.91:161,0,14	0/1:28,0:28:14.48:33,0,14	0/1:28,0:27:9.61:10,0,50	0/0:28,0:27:23.55:0,24,176	0/0:22,0:20:16.49:0,16,107	0/0:25,0:20:13.96:0,14,124	0/1:18,0:17:21.40:21,0,99	0/0:86,0:80:2.73:0,3,244	0/1:19,0:19:4.81:5,0,66	0/0:21,0:19:13.67:0,14,70	0/0:30,0:30:20.14:0,20,124	0/0:22,0:21:14.54:0,15,117	0/0:33,0:30:0.14:0,0,132	0/0:15,0:16:2.84:0,3,14	0/0:20,0:21:23.31:0,23,206
chr10	51656207	.	CG	C	2728.21	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.501;DP=678;FS=12.439;HRun=1;HaplotypeScore=139.1787;InbreedingCoeff=0.9923;MQ=83.43;MQ0=0;MQRankSum=-7.795;QD=37.89;ReadPosRankSum=1.405;VQSLOD=1.6846;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,105,1673	1/1:1,8:9:27.08:360,27,0	0/0:22,0:22:63.20:0,63,931	0/0:26,0:26:74.88:0,75,1071	0/0:22,0:22:63.21:0,63,1006	0/0:18,0:18:54.18:0,54,862	0/0:34,0:34:99:0,102,1622	0/0:28,0:28:84.28:0,84,1320	0/0:23,0:23:69.24:0,69,1100	0/0:26,0:26:75.24:0,75,1177	0/0:14,0:14:42.14:0,42,671	0/0:38,0:38:99:0,111,1738	0/0:37,0:37:99:0,105,1668	0/0:41,0:41:99:0,123,1960	1/1:0,31:31:90.30:1254,90,0	1/1:0,32:32:90.30:1257,90,0	0/0:20,0:20:44.04:0,44,627	0/0:10,0:10:20.52:0,21,273	0/0:20,0:20:60.19:0,60,936	0/0:15,0:15:45.15:0,45,713	0/0:53,0:53:99:0,160,2525	0/0:22,0:22:46.47:0,46,850	0/0:13,0:13:39.13:0,39,621	0/0:27,0:27:56.94:0,57,900	0/0:16,0:16:48.16:0,48,766	0/0:22,0:22:66.22:0,66,1049	0/0:18,0:18:54.18:0,54,862	0/0:5,0:5:15.05:0,15,239
chr10	51656250	.	A	ATTGCATGCAT	27418.90	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=9.603;DP=701;FS=1.390;HRun=0;HaplotypeScore=230.1902;InbreedingCoeff=0.9886;MQ=80.92;MQ0=0;MQRankSum=-19.088;QD=107.11;ReadPosRankSum=-0.255;VQSLOD=4.7674;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,123,3745	1/1:2,3:7:15.05:725,15,0	0/0:26,0:26:66.15:0,66,1812	0/0:23,0:23:51.15:0,51,1309	0/0:17,0:17:45.15:0,45,1338	0/0:21,0:21:54.17:0,54,1689	0/0:41,0:41:99:0,111,3420	0/0:28,0:28:66.23:0,66,2010	0/0:28,0:28:75.24:0,75,2315	0/0:29,0:29:84.29:0,84,2695	0/0:11,0:11:33.11:0,33,1042	1/1:15,22:40:99:4811,99,0	1/1:17,18:38:90.31:4382,90,0	0/0:37,0:37:93.32:0,93,2931	1/1:18,13:33:87.23:3708,87,0	1/1:15,20:35:93.30:4356,93,0	1/1:9,9:21:45.15:2266,45,0	1/1:3,5:8:24.08:1114,24,0	0/0:22,0:22:60.17:0,60,1484	0/0:19,0:19:54.19:0,54,1708	0/0:42,0:42:99:0,108,3426	1/1:7,12:21:51.18:2445,51,0	1/1:7,9:18:38.87:1793,39,0	1/1:20,12:35:41.42:1819,41,0	0/0:13,0:13:39.13:0,39,1199	0/0:21,0:21:60.20:0,60,1795	0/0:19,0:19:54.17:0,54,1601	0/0:3,0:3:9.03:0,9,294
chr10	51657402	.	CG	C	56.67	PASS	AC=2;AF=0.045;AN=44;BaseQRankSum=2.622;DP=148;FS=0.000;HRun=1;HaplotypeScore=23.3777;InbreedingCoeff=0.4222;MQ=33.65;MQ0=13;MQRankSum=-2.659;QD=8.10;ReadPosRankSum=-0.065;VQSLOD=0.5446;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,7:6:11.95:141,12,0	./.	./.	./.	0/0:9,0:8:14.92:0,15,201	0/0:6,0:6:15.04:0,15,213	0/0:15,0:13:35.99:0,36,495	0/0:8,0:6:12.04:0,12,189	0/0:6,0:5:12.04:0,12,181	0/0:2,0:2:6.02:0,6,95	0/0:6,0:6:11.95:0,12,155	0/0:4,0:4:2.84:0,3,14	0/0:4,0:3:5.90:0,6,51	0/0:5,0:5:15.02:0,15,190	./.	./.	0/0:8,0:5:11.77:0,12,114	0/0:5,0:2:5.98:0,6,46	0/0:10,0:8:24.08:0,24,371	0/0:6,0:5:14.98:0,15,203	0/0:10,0:8:17.91:0,18,228	0/0:6,0:5:8.95:0,9,71	0/0:5,0:3:5.80:0,6,32	0/0:1,0:1:3.01:0,3,36	0/0:6,0:5:12.04:0,12,188	0/0:7,0:7:21.07:0,21,331	0/0:6,0:6:14.98:0,15,205	./.
chr10	51657403	.	G	GGA	259.34	PASS	AB=0.909;AC=11;AF=0.250;AN=44;BaseQRankSum=4.859;DP=177;FS=0.000;HRun=0;HaplotypeScore=71.1110;InbreedingCoeff=0.7035;MQ=32.76;MQ0=13;MQRankSum=-0.835;QD=4.89;ReadPosRankSum=-3.560;VQSLOD=1.2256;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:8:17.02:0,17,86	./.	./.	./.	0/0:9,0:8:15.01:0,15,176	0/0:6,0:6:15.04:0,15,220	0/0:15,0:13:36.01:0,36,482	0/0:7,0:5:12.04:0,12,193	0/0:6,0:5:12.04:0,12,191	0/0:2,0:2:6.02:0,6,96	0/0:6,0:6:11.52:0,12,140	1/1:7,4:10:4.04:74,4,0	1/1:6,0:5:9.34:66,9,0	0/0:4,0:4:12.03:0,12,160	./.	./.	0/0:9,0:6:12.77:0,13,108	0/1:9,0:5:10.04:10,0,21	0/0:10,0:8:24.04:0,24,350	0/0:6,0:5:15:0,15,169	0/0:10,0:8:17.96:0,18,223	1/1:9,2:10:9:86,9,0	1/1:7,3:8:12.27:133,12,0	1/1:4,1:5:4.67:34,5,0	0/0:6,0:5:12.04:0,12,182	0/0:7,0:7:21.07:0,21,327	0/0:6,0:6:18:0,18,217	./.
chr10	51657421	.	ATAAATAAAT	A	1328.98	PASS	AC=14;AF=1.000;AN=14;DP=76;FS=0.000;HRun=0;HaplotypeScore=52.3067;MQ=24.80;MQ0=8;QD=22.91;VQSLOD=1.6509;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:12:36.12:473,36,0	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	1/1:10,0:9:22.54:214,23,0	1/1:5,0:4:12.02:153,12,0	./.	./.	./.	1/1:6,0:4:11.50:93,11,0	1/1:11,0:5:15.03:194,15,0	./.	./.	./.	./.	1/1:7,0:5:15.05:203,15,0	1/1:5,0:5:8.95:70,9,0	./.	./.	./.	./.
chr10	51658018	.	GA	G	89.03	PASS	AB=0.821;AC=12;AF=0.857;AN=14;BaseQRankSum=-2.451;DP=21;FS=2.920;HRun=1;HaplotypeScore=22.0585;MQ=194.91;MQ0=0;MQRankSum=-1.099;QD=4.95;ReadPosRankSum=-1.268;VQSLOD=0.0126;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/1:3,5:7:0.76:8,0,1	0/1:3,0:2:6.20:27,0,6	./.	./.	./.	1/1:1,0:1:2.96:19,3,0	1/1:1,0:1:3:25,3,0	./.	./.	./.	./.	1/1:1,0:1:2.97:20,3,0	1/1:1,0:1:2.98:21,3,0	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	1/1:2,0:2:5.94:41,6,0	./.	./.
chr10	51658178	.	TGATTTCTGAGTTA	T	1730.50	PASS	AC=2;AF=0.037;AN=54;BaseQRankSum=6.092;DP=490;FS=17.004;HRun=0;HaplotypeScore=191.6671;InbreedingCoeff=0.9833;MQ=86.34;MQ0=0;MQRankSum=-5.658;QD=82.40;ReadPosRankSum=2.251;VQSLOD=2.5198;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,21:21:45.15:1825,45,0	./.	0/0:14,0:14:42.14:0,42,2593	0/0:26,0:26:78.27:0,78,4533	0/0:9,0:9:27.09:0,27,1799	0/0:22,0:22:66.23:0,66,4355	0/0:36,0:36:99:0,105,6685	0/0:46,0:46:99:0,138,8427	0/0:19,0:19:57.20:0,57,3779	0/0:17,0:17:51.18:0,51,3389	0/0:12,0:12:36.12:0,36,2177	0/0:9,0:9:27.09:0,27,1603	0/0:13,0:13:33.11:0,33,2040	0/0:18,0:18:54.18:0,54,3331	0/0:18,0:18:48.16:0,48,2449	0/0:15,0:15:36.12:0,36,2153	0/0:12,0:12:24.06:0,24,1159	0/0:9,0:9:27.09:0,27,1530	0/0:29,0:29:87.29:0,87,5573	0/0:12,0:12:36.12:0,36,2111	0/0:29,0:29:87.30:0,87,5313	0/0:13,0:13:36.12:0,36,2101	0/0:10,0:10:24.08:0,24,1220	0/0:19,0:19:51.18:0,51,2800	0/0:9,0:9:27.08:0,27,1511	0/0:27,0:27:81.27:0,81,5130	0/0:20,0:19:60.21:0,60,3861	0/0:6,0:6:18.06:0,18,1223
chr10	51658212	.	A	ACAGCTATCTCCTGACCCACAGC	19504.34	PASS	AC=18;AF=0.333;AN=54;BaseQRankSum=3.419;DP=530;FS=22.344;HRun=0;HaplotypeScore=298.1015;InbreedingCoeff=0.9884;MQ=95.17;MQ0=0;MQRankSum=-12.659;QD=166.70;ReadPosRankSum=1.357;VQSLOD=3.1497;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:87.26:0,87,3998	./.	0/0:28,0:28:75.23:0,75,3296	0/0:29,0:29:80.74:0,81,4064	0/0:16,0:16:45.15:0,45,2572	0/0:19,0:19:54.19:0,54,2810	0/0:35,0:35:96.32:0,96,4710	0/0:39,0:38:99:0,105,4865	0/0:32,0:32:93.32:0,93,5333	0/0:18,0:18:54.19:0,54,3193	0/0:12,0:12:33.10:0,33,1491	1/1:19,3:22:57.19:4064,57,0	1/1:5,6:12:27.09:2425,27,0	0/0:24,0:24:69.18:0,69,3539	1/1:9,4:15:32.98:2325,33,0	1/1:7,3:16:30.10:2937,30,0	1/1:11,0:11:24.04:1707,24,0	1/1:7,0:7:21.07:1443,21,0	0/0:20,0:20:57.15:0,57,2550	0/0:9,0:9:27.09:0,27,1576	0/0:34,0:34:93.30:0,93,5050	1/1:8,2:11:18.06:1804,18,0	1/1:3,2:7:12.04:1219,12,0	1/1:16,0:16:18.06:1579,18,0	0/0:9,0:9:27.09:0,27,1414	0/0:24,0:24:72.25:0,72,3844	0/0:27,0:26:81.28:0,81,4510	0/0:5,0:5:15.05:0,15,790
chr10	51658302	.	A	AG	4074.81	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=9.255;DP=650;FS=12.992;HRun=0;HaplotypeScore=127.3312;InbreedingCoeff=0.9906;MQ=86.52;MQ0=0;MQRankSum=-9.844;QD=38.08;ReadPosRankSum=-0.114;VQSLOD=1.7592;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,143,1017	0/0:5,0:5:12.01:0,12,110	0/0:28,0:30:35.27:0,35,974	0/0:27,0:27:74.64:0,75,951	0/0:18,0:18:48.16:0,48,671	0/0:27,0:27:81.27:0,81,1133	0/0:33,0:33:96.32:0,96,1342	0/0:41,0:41:99:0,120,1649	0/0:27,0:27:78.23:0,78,1055	0/0:34,0:34:96.31:0,96,1328	0/0:14,0:14:36.12:0,36,500	1/1:0,20:20:60.20:957,60,0	1/1:1,24:25:66.22:1051,66,0	0/0:29,0:29:87.27:0,87,1188	0/0:27,0:27:74.73:0,75,627	0/0:25,0:25:59.99:0,60,522	1/1:1,10:11:32.14:484,32,0	1/1:1,7:8:21.07:335,21,0	0/0:23,0:23:66.21:0,66,908	0/0:8,0:8:24.08:0,24,335	0/0:53,0:53:99:0,156,2160	1/1:1,14:15:30.10:478,30,0	1/1:0,13:13:21.07:335,21,0	1/1:0,15:15:29.13:435,29,0	0/0:10,0:10:27.09:0,27,378	0/0:23,0:23:63.21:0,63,881	0/0:33,0:33:99:0,99,1365	0/0:6,0:6:18.06:0,18,251
chr10	51658321	.	A	AC	2488.20	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=16.023;DP=623;FS=14.860;HRun=1;HaplotypeScore=127.2482;InbreedingCoeff=0.9771;MQ=86.88;MQ0=0;MQRankSum=-15.010;QD=19.29;ReadPosRankSum=1.646;VQSLOD=2.6682;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,117,1501	1/1:1,4:5:9:81,9,0	0/0:30,0:30:87.22:0,87,1081	0/0:23,0:23:60.12:0,60,704	0/0:17,0:17:42.12:0,42,530	0/0:25,0:25:72.23:0,72,935	0/0:33,0:33:99:0,99,1272	0/0:45,0:45:99:0,132,1689	0/0:28,0:28:84.27:0,84,1089	0/0:30,0:30:87.27:0,87,1113	0/0:16,0:16:48.14:0,48,609	1/1:7,11:18:46.19:405,46,0	1/1:7,16:23:57.69:480,58,0	0/0:32,0:32:93.28:0,93,1191	1/1:4,10:14:38.90:324,39,0	1/1:6,11:17:38.13:328,38,0	1/1:3,6:9:23.86:170,24,0	1/1:1,3:4:11.98:103,12,0	0/0:25,0:25:72.23:0,72,935	0/0:10,0:10:30.07:0,30,361	0/0:54,0:54:99:0,153,1940	1/1:4,13:17:35.99:314,36,0	1/1:3,11:14:35.99:329,36,0	1/1:1,7:8:22.62:172,23,0	0/0:16,0:16:45.14:0,45,571	0/0:32,0:32:93.30:0,93,1207	0/0:31,0:31:93.29:0,93,1192	0/0:5,0:5:9.03:0,9,117
chr10	51658323	.	A	ATAGCCT	9177.20	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=14.874;DP=619;FS=16.509;HRun=0;HaplotypeScore=157.1047;InbreedingCoeff=0.9844;MQ=86.90;MQ0=0;MQRankSum=-14.664;QD=69.52;ReadPosRankSum=3.244;VQSLOD=4.8164;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,117,2861	1/1:2,4:6:9.03:283,9,0	0/0:32,0:32:96.22:0,96,2161	0/0:21,0:21:57.16:0,57,1306	0/0:16,0:16:39.10:0,39,999	0/0:26,0:26:72.25:0,72,1816	0/0:32,0:32:96.33:0,96,2432	0/0:45,0:45:99:0,135,3167	0/0:29,0:29:87.27:0,87,2117	0/0:28,0:28:84.29:0,84,2149	0/0:15,0:15:45.15:0,45,1152	1/1:8,11:19:42.10:1135,42,0	1/1:3,16:19:51.16:1527,51,0	0/0:31,0:31:93.29:0,93,2279	1/1:2,10:12:33.11:1034,33,0	1/1:0,11:11:33.11:1035,33,0	1/1:6,6:12:18.06:558,18,0	1/1:7,3:10:21.07:598,21,0	0/0:26,0:26:75.14:0,75,1872	0/0:8,0:8:24.08:0,24,615	0/0:53,0:53:99:0,159,3714	1/1:3,13:16:39.12:1151,39,0	1/1:5,11:16:33.08:1032,33,0	1/1:4,7:11:30.09:825,30,0	0/0:17,0:17:51.11:0,51,1196	0/0:31,0:31:93.31:0,93,2331	0/0:32,0:32:96.32:0,96,2379	0/0:5,0:5:12.02:0,12,253
chr10	51658400	.	A	AACAAAC	1192.74	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=5.096;DP=669;FS=3.750;HRun=0;HaplotypeScore=152.7536;InbreedingCoeff=0.9627;MQ=73.54;MQ0=0;MQRankSum=-4.779;QD=49.70;ReadPosRankSum=1.658;VQSLOD=3.8157;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,120,2414	1/1:2,4:7:9.03:311,9,0	0/0:29,0:29:75.06:0,75,1396	0/0:15,0:16:20.32:0,20,590	0/0:18,0:18:48.13:0,48,926	0/0:24,0:24:68.96:0,69,1469	0/0:25,0:25:69.19:0,69,1341	0/0:35,0:35:93.28:0,93,1817	0/0:29,0:29:78.24:0,78,1651	0/0:27,0:27:63.20:0,63,1299	0/0:25,0:25:72.25:0,72,1606	0/0:32,0:32:96.26:0,96,2023	0/0:30,0:30:87.22:0,87,1890	0/0:33,0:33:96.17:0,96,1797	1/1:0,6:9:18.06:598,18,0	1/1:0,4:8:12.04:416,12,0	0/0:30,0:30:84.20:0,84,1686	0/0:17,0:17:49.37:0,49,985	0/0:28,0:28:75.24:0,75,1541	0/0:29,0:29:87.28:0,87,1896	0/0:21,0:21:54.17:0,54,1159	0/0:17,0:17:48.02:0,48,847	0/0:19,0:19:57.11:0,57,1104	0/0:24,0:24:66.14:0,66,1339	0/0:25,0:25:72.18:0,72,1396	0/0:29,0:29:81.23:0,81,1583	0/0:24,0:24:69.24:0,69,1550	0/0:16,0:16:48.16:0,48,1103
chr10	51658527	.	A	ACATCTCTACAACATT	17516.50	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-4.122;DP=533;FS=10.864;HRun=0;HaplotypeScore=198.3236;InbreedingCoeff=0.9881;MQ=87.16;MQ0=0;MQRankSum=-14.521;QD=141.26;ReadPosRankSum=2.265;VQSLOD=4.2760;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,5:18:39.05:1909,39,0	1/1:2,3:5:15.05:840,15,0	0/0:22,0:22:51.14:0,51,2127	0/0:19,0:19:53.67:0,54,2031	0/0:28,0:28:81.28:0,81,3648	0/0:31,0:31:90.31:0,90,3979	0/0:26,0:26:78.25:0,78,3039	0/0:26,0:26:78.24:0,78,3018	0/0:18,0:18:54.17:0,54,2097	0/0:20,0:20:60.16:0,60,2346	0/0:20,0:20:60.19:0,60,2312	1/1:6,8:15:42.14:2769,42,0	1/1:4,12:22:54.19:3860,54,0	0/0:24,0:24:69.24:0,69,3120	1/1:3,3:8:15.05:991,15,0	1/1:3,3:8:18.03:1165,18,0	1/1:6,3:13:18.06:1237,18,0	1/1:0,5:6:15.05:1147,15,0	0/0:21,0:21:60.19:0,60,2356	0/0:27,0:27:81.28:0,81,3524	0/0:35,0:35:99:0,102,4311	1/1:1,4:6:18.06:1048,18,0	1/1:4,3:9:18.06:913,18,0	1/1:3,7:14:24.08:1637,24,0	0/0:16,0:16:48.14:0,48,2120	0/0:33,0:33:99:0,99,4024	0/0:33,0:32:99:0,99,3831	0/0:10,0:10:27.09:0,27,1258
chr10	51658816	.	GA	G	1836.17	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.286;DP=722;FS=4.842;HRun=4;HaplotypeScore=68.5898;InbreedingCoeff=0.9998;MQ=83.14;MQ0=0;MQRankSum=-2.108;QD=29.62;ReadPosRankSum=2.581;VQSLOD=4.1111;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,123,1699	1/1:0,12:12:30.09:360,30,0	0/0:23,0:23:60.17:0,60,800	0/0:20,0:20:50.38:0,50,671	0/0:35,0:35:99:0,102,1420	0/0:29,0:29:81.23:0,81,1109	0/0:26,0:26:72.21:0,72,972	0/0:25,0:25:69.22:0,69,949	0/0:29,0:29:87.29:0,87,1215	0/0:32,0:32:90.29:0,90,1224	0/0:30,0:30:87.28:0,87,1202	0/0:24,0:24:63.20:0,63,860	0/0:32,0:32:96.32:0,96,1340	0/0:28,0:28:75.25:0,75,1049	1/1:1,27:28:72.22:864,72,0	1/1:0,22:22:63.19:755,63,0	0/0:28,0:28:75.21:0,75,1014	0/0:19,0:19:48.12:0,48,650	0/0:18,0:18:51.17:0,51,711	0/0:28,0:28:81.23:0,81,1112	0/0:24,0:24:69.23:0,69,966	0/0:23,0:23:63.21:0,63,882	0/0:22,0:22:63.12:0,63,837	0/0:29,0:29:87.20:0,87,1174	0/0:18,0:18:51.14:0,51,691	0/0:41,0:41:99:0,120,1641	0/0:22,0:22:63.20:0,63,863	0/0:12,0:12:36.12:0,36,503
chr10	51659021	.	T	TAGACTGCATCAA	21654.34	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=1.901;DP=703;FS=1.936;HRun=0;HaplotypeScore=219.6841;InbreedingCoeff=0.9187;MQ=83.09;MQ0=0;MQRankSum=-17.189;QD=92.15;ReadPosRankSum=-0.474;VQSLOD=4.6629;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:14,16:33:57.07:2709,57,0	1/1:5,0:4:12:563,12,0	0/0:19,0:19:42.10:0,42,1074	0/0:28,0:28:71.90:0,72,1891	0/0:35,0:35:93.29:0,93,3052	0/0:34,0:34:87.27:0,87,2749	0/0:29,0:29:81.25:0,81,2620	0/0:35,0:35:84.26:0,84,2755	0/0:21,0:21:51.15:0,51,1624	0/0:35,0:35:93.31:0,93,3136	0/0:29,0:29:63.22:0,63,2139	1/1:3,11:17:27.09:1358,27,0	1/1:7,25:36:69.20:3594,69,0	0/0:28,0:28:69.22:0,69,2334	1/1:26,0:26:72.20:3108,72,0	0/1:33,0:33:13.65:3166,0,14	1/1:8,9:17:39.10:2072,39,0	1/1:5,5:12:18.06:961,18,0	0/0:14,0:14:39.13:0,39,1308	0/0:37,0:37:99:0,102,3534	0/0:23,0:23:66.23:0,66,2151	1/1:4,11:19:44.93:1784,45,0	1/1:8,14:23:38.62:1581,39,0	1/1:5,5:14:15.05:758,15,0	0/0:32,0:32:93.31:0,93,3207	0/0:31,0:31:72.24:0,72,2499	0/0:21,0:21:57.16:0,57,1854	0/0:17,0:17:51.15:0,51,1692
chr10	51659027	.	G	GCATCAAAGA	14013.16	PASS	AB=0.898;AC=13;AF=0.232;AN=56;BaseQRankSum=15.797;DP=660;FS=1.551;HRun=0;HaplotypeScore=203.8689;InbreedingCoeff=0.0969;MQ=86.36;MQ0=0;MQRankSum=-16.649;QD=67.70;ReadPosRankSum=4.851;VQSLOD=4.4447;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:27:99:1597,0,214	0/1:3,3:5:21.67:367,0,22	0/0:19,0:19:51.15:0,51,1315	0/0:31,0:31:83.16:0,83,2009	0/0:34,0:34:99:0,99,2947	0/0:31,0:31:93.32:0,93,2715	0/0:28,0:28:84.27:0,84,2509	0/0:37,0:37:99:0,99,2752	0/0:18,0:18:54.19:0,54,1563	0/0:36,0:36:99:0,99,2930	0/0:24,0:24:69.24:0,69,2039	1/1:9,0:9:19.17:824,19,0	1/1:27,0:27:23.36:2259,23,0	0/0:24,0:24:72.22:0,72,2075	0/1:15,13:28:52.04:2231,0,52	0/1:22,13:35:99:2318,0,228	0/1:17,0:17:67.70:1386,0,68	0/1:10,0:10:45.92:606,0,46	0/0:14,0:14:42.13:0,42,1212	0/0:36,0:36:99:0,105,3194	0/0:24,0:24:72.25:0,72,2050	0/1:17,0:17:99:1036,0,254	0/1:19,0:19:99:921,0,255	0/1:12,0:12:72.61:469,0,73	0/0:33,0:33:93.31:0,93,2832	0/0:28,0:28:78.25:0,78,2251	0/0:19,0:19:57.18:0,57,1680	0/0:17,0:17:51.18:0,51,1558
chr10	51659031	.	C	CTGG	2051.70	PASS	AB=0.918;AC=11;AF=0.196;AN=56;BaseQRankSum=15.849;DP=662;FS=4.066;HRun=0;HaplotypeScore=165.1311;InbreedingCoeff=-0.2327;MQ=87.52;MQ0=0;MQRankSum=-13.963;QD=9.91;ReadPosRankSum=5.509;VQSLOD=3.1953;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:24:99:141,0,138	0/1:4,3:6:12.15:165,0,12	0/0:22,0:22:54.06:0,54,811	0/0:30,0:30:67.58:0,68,1266	0/0:35,0:35:96.31:0,96,1748	0/0:29,0:29:87.27:0,87,1551	0/0:29,0:29:87.23:0,87,1522	0/0:34,0:34:99:0,99,1683	0/0:19,0:19:54.16:0,54,934	0/0:35,0:35:99:0,105,1811	0/0:24,0:24:72.23:0,72,1300	0/1:9,0:9:32.53:77,0,33	0/1:30,0:30:86.43:193,0,86	0/0:26,0:26:78.20:0,78,1288	0/1:13,13:26:99:655,0,207	0/1:23,13:36:99:635,0,444	0/1:16,0:16:83.45:83,0,168	0/1:10,0:10:19.44:19,0,130	0/0:18,0:18:45.13:0,45,751	0/0:37,0:37:99:0,105,1892	0/0:22,0:22:66.21:0,66,1181	0/1:16,0:16:99:105,0,125	0/1:20,0:20:85.14:85,0,228	0/1:13,0:13:41.66:42,0,66	0/0:34,0:34:99:0,99,1751	0/0:26,0:26:78.23:0,78,1338	0/0:18,0:18:54.19:0,54,1004	0/0:17,0:17:51.16:0,51,919
chr10	51659229	.	CTGTTGGTT	C	5876.33	PASS	AB=0.947;AC=16;AF=0.286;AN=56;BaseQRankSum=11.135;DP=569;FS=18.751;HRun=0;HaplotypeScore=149.7311;InbreedingCoeff=0.6856;MQ=56.88;MQ0=4;MQRankSum=-11.079;QD=41.38;ReadPosRankSum=2.865;VQSLOD=3.5793;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:65.97:0,66,710	0/1:9,0:9:30.93:167,0,31	0/0:23,0:17:50.86:0,51,1216	0/0:36,0:28:67.09:0,67,1820	0/0:27,0:27:78.22:0,78,2739	0/0:33,0:33:96.16:0,96,2903	0/0:21,0:21:63.20:0,63,2378	0/0:30,0:30:81.17:0,81,1841	0/0:21,0:21:63.19:0,63,2355	0/0:28,0:27:81.23:0,81,2705	0/0:20,0:20:57.12:0,57,2170	1/1:7,12:19:57.02:1192,57,0	1/1:1,19:20:36.12:997,36,0	0/0:24,0:24:69.21:0,69,2660	0/1:15,0:15:2.14:238,0,2	0/1:5,0:5:25.98:26,0,55	1/1:2,12:14:18.06:502,18,0	0/1:11,4:15:49.42:530,0,49	0/0:23,0:22:51.14:0,51,1564	0/0:26,0:26:78.22:0,78,3007	0/0:13,0:13:36.08:0,36,1181	1/1:7,7:14:38.94:746,39,0	1/1:1,16:17:32.64:919,33,0	1/1:10,4:14:35.82:560,36,0	0/0:21,0:21:56.95:0,57,1881	0/0:28,0:28:84.05:0,84,2612	0/0:23,0:23:69.13:0,69,2032	0/0:7,0:7:21.03:0,21,604
chr10	51659234	.	GGTTT	G	2518.85	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=12.859;DP=575;FS=17.172;HRun=0;HaplotypeScore=118.2043;InbreedingCoeff=0.8983;MQ=58.49;MQ0=5;MQRankSum=-10.000;QD=16.04;ReadPosRankSum=1.966;VQSLOD=2.0861;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:7,15:22:54.10:855,54,0	1/1:9,0:9:15.02:140,15,0	0/0:25,0:18:27.09:0,27,565	0/0:41,0:33:50.47:0,50,918	0/0:26,0:26:57.20:0,57,1350	0/0:32,0:32:60.21:0,60,1424	0/0:24,0:24:60.20:0,60,1384	0/0:32,0:32:45.12:0,45,860	0/0:22,0:22:54.19:0,54,1290	0/0:29,0:28:60.21:0,60,1347	0/0:20,0:20:51.17:0,51,1201	1/1:18,0:19:36.47:320,36,0	1/1:19,0:19:36.02:325,36,0	0/0:23,0:23:57.20:0,57,1363	1/1:15,0:15:20.82:195,21,0	1/1:4,0:4:3:28,3,0	1/1:12,0:12:18.01:162,18,0	0/1:14,0:14:8.35:120,0,8	0/0:19,0:17:36.10:0,36,800	0/0:28,0:28:72.25:0,72,1709	0/0:12,0:12:24.08:0,24,580	1/1:13,0:13:21.48:190,21,0	1/1:16,0:16:32.59:297,33,0	1/1:14,0:14:12.90:102,13,0	0/0:21,0:21:42.13:0,42,971	0/0:30,0:30:57.20:0,57,1323	0/0:23,0:23:42.13:0,42,928	0/0:11,0:11:24.08:0,24,554
chr10	51659246	.	TGTTTGTTTGTTTG	T	1543.98	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=4.154;DP=598;FS=0.000;HRun=0;HaplotypeScore=231.3319;InbreedingCoeff=0.9267;MQ=58.96;MQ0=6;MQRankSum=-5.311;QD=57.18;ReadPosRankSum=1.253;VQSLOD=3.1134;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:66.70:0,67,2098	1/1:0,8:8:15.05:628,15,0	0/0:33,0:23:66.21:0,66,2922	0/0:40,0:33:76.47:0,76,3879	0/0:27,0:27:81.28:0,81,4444	0/0:27,0:27:78.22:0,78,4359	0/0:27,0:27:81.26:0,81,4457	0/0:29,0:29:84.27:0,84,3909	0/0:25,0:25:75.24:0,75,4146	0/0:26,0:25:75.26:0,75,4379	0/0:19,0:19:57.20:0,57,3541	0/0:23,0:23:69.18:0,69,1191	0/0:22,0:22:45.07:0,45,660	0/0:24,0:24:72.21:0,72,4203	1/1:1,15:16:23.63:920,24,0	1/1:0,3:3:3.01:126,3,0	0/0:19,0:19:42.13:0,42,907	0/0:17,0:17:45.11:0,45,933	0/0:19,0:17:51.17:0,51,2721	0/0:29,0:29:87.25:0,87,5108	0/0:10,0:10:27.09:0,27,1722	0/0:16,0:16:45.12:0,45,790	0/0:21,0:21:42.58:0,43,579	0/0:14,0:14:36.11:0,36,670	0/0:21,0:21:63.22:0,63,3413	0/0:28,0:28:84.27:0,84,4477	0/0:21,0:21:63.19:0,63,3365	0/0:10,0:10:30.10:0,30,1578
chr10	51659324	.	A	AT	6530.90	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-7.832;DP=541;FS=16.280;HRun=3;HaplotypeScore=55.6116;InbreedingCoeff=0.9946;MQ=87.89;MQ0=0;MQRankSum=-4.372;QD=35.30;ReadPosRankSum=2.576;VQSLOD=3.5511;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,29:30:75.25:1043,75,0	0/0:7,0:7:12.04:0,12,144	0/0:18,0:18:29.91:0,30,327	0/0:25,0:25:48.46:0,48,520	0/0:18,0:18:51.14:0,51,599	0/0:18,0:18:51.16:0,51,612	0/0:23,0:23:63.17:0,63,742	0/0:27,0:26:75.20:0,75,871	0/0:15,0:15:45.10:0,45,524	0/0:14,0:14:38.91:0,39,445	0/0:17,0:17:45.14:0,45,539	1/1:0,16:16:45.15:623,45,0	1/1:1,17:18:46.04:631,46,0	0/0:14,0:14:39.10:0,39,456	0/0:16,0:16:33.10:0,33,393	0/0:17,0:16:45.14:0,45,537	1/1:0,33:33:93.31:1302,93,0	1/1:2,15:17:48.16:667,48,0	0/0:15,0:15:36.05:0,36,397	0/0:23,0:23:60.15:0,60,696	0/0:14,0:14:39.11:0,39,457	1/1:1,21:22:54.13:722,54,0	1/1:1,20:21:45.06:577,45,0	1/1:1,26:27:69.70:966,70,0	0/0:17,0:17:51.16:0,51,612	0/0:13,0:13:39.12:0,39,468	0/0:21,0:21:60.18:0,60,719	0/0:24,0:24:72.22:0,72,862
chr10	51659435	.	AAGAAAAGAG	A	721.23	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=3.416;DP=493;FS=30.959;HRun=0;HaplotypeScore=130.7341;InbreedingCoeff=0.9431;MQ=76.33;MQ0=3;MQRankSum=-2.815;QD=32.78;ReadPosRankSum=-0.447;VQSLOD=1.5779;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:45.15:0,45,1843	1/1:0,7:7:15.05:435,15,0	0/0:54,0:35:67.22:0,67,1982	0/0:59,0:29:57.59:0,58,1686	0/0:11,0:11:27.09:0,27,1040	0/0:12,0:12:30.10:0,30,1298	0/0:20,0:20:52.41:0,52,1990	0/0:22,0:22:45.10:0,45,1601	0/0:20,0:20:57.18:0,57,1822	0/0:17,0:17:51.18:0,51,2207	0/0:15,0:15:45.15:0,45,1920	0/0:16,0:16:42.14:0,42,1461	0/0:14,0:14:36.11:0,36,1176	0/0:12,0:12:27.09:0,27,1126	1/1:2,5:7:6.02:175,6,0	1/1:7,1:8:15:241,15,0	0/0:19,0:18:42.14:0,42,1647	0/0:12,0:12:24.08:0,24,914	0/0:10,0:10:27.09:0,27,942	0/0:13,0:13:36.12:0,36,1274	0/0:16,0:16:30.10:0,30,1269	0/0:13,0:13:24.08:0,24,1006	0/0:10,0:10:18.06:0,18,642	0/0:26,0:26:69.24:0,69,2568	0/0:12,0:12:30.10:0,30,1184	0/0:13,0:13:36.12:0,36,1489	0/0:22,0:22:51.16:0,51,1770	0/0:16,0:16:30.10:0,30,1258
chr10	51659453	.	GGA	G	32.83	PASS	AB=0.936;AC=12;AF=0.214;AN=56;BaseQRankSum=5.152;DP=485;FS=15.258;HRun=0;HaplotypeScore=66.4356;InbreedingCoeff=0.1030;MQ=61.01;MQ0=31;MQRankSum=-3.176;QD=0.19;ReadPosRankSum=0.805;VQSLOD=0.3955;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:35.51:0,36,572	1/1:7,0:7:11.86:41,12,0	0/0:70,1:30:14.98:0,15,725	0/1:76,1:24:3.41:3,0,516	0/0:9,0:9:18.06:0,18,280	0/0:12,0:11:27.09:0,27,411	0/0:18,2:18:0.92:0,1,580	0/0:24,0:23:46.68:0,47,708	0/1:15,1:16:8.03:8,0,438	0/0:22,0:19:48.16:0,48,748	0/0:16,0:16:40.02:0,40,625	0/0:13,0:13:25.98:0,26,485	0/1:10,1:11:27.87:28,0,177	0/0:8,0:8:21.07:0,21,337	1/1:7,0:6:4.09:18,4,0	0/1:6,0:6:26.23:26,0,81	0/0:12,0:11:30.10:0,30,474	0/1:10,2:11:15.44:15,0,240	0/0:14,0:12:33.06:0,33,464	0/0:10,0:9:24.08:0,24,371	0/0:15,0:12:24.08:0,24,385	0/0:7,0:7:18.06:0,18,289	0/0:7,0:7:18.06:0,18,288	0/0:24,0:24:26.12:0,26,618	0/1:11,1:11:20.16:20,0,269	0/1:13,1:13:8.12:8,0,449	0/1:12,1:13:11.09:11,0,358	0/0:10,0:10:27.09:0,27,439
chr10	51659718	.	GT	G	7726.40	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=11.177;DP=651;FS=1.396;HRun=1;HaplotypeScore=66.9303;InbreedingCoeff=0.9993;MQ=89.41;MQ0=0;MQRankSum=-6.162;QD=38.83;ReadPosRankSum=4.358;VQSLOD=5.4551;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,36:36:99:1384,99,0	0/0:8,0:8:21.07:0,21,333	0/0:27,0:27:81.23:0,81,1209	0/0:23,0:23:66.21:0,66,997	0/0:22,0:22:63.21:0,63,1004	0/0:24,0:24:69.20:0,69,1044	0/0:26,0:26:78.25:0,78,1224	0/0:24,0:24:72.23:0,72,1109	0/0:32,0:32:96.33:0,96,1534	0/0:21,0:20:63.21:0,63,1006	0/0:15,0:15:45.15:0,45,719	1/1:0,25:25:72.24:1006,72,0	1/1:0,21:21:60.20:839,60,0	0/0:18,0:18:54.18:0,54,862	0/0:29,0:29:84.23:0,84,1288	0/0:29,0:29:84.27:0,84,1319	1/1:0,34:34:96.32:1342,96,0	1/1:0,19:19:54.18:752,54,0	0/0:18,0:18:54.18:0,54,840	0/0:13,0:13:39.13:0,39,623	0/0:32,0:32:96.31:0,96,1509	1/1:0,17:17:42.10:565,42,0	1/1:0,17:17:44.82:625,45,0	1/1:0,30:30:87.29:1212,87,0	0/0:15,0:15:45.13:0,45,673	0/0:28,0:28:84.29:0,84,1342	0/0:25,0:25:75.26:0,75,1195	0/0:23,0:23:69.24:0,69,1103
chr10	51660399	.	AAAGTGTGAATGTG	A	16223.52	PASS	AB=0.519;AC=20;AF=0.357;AN=56;BaseQRankSum=16.608;DP=592;FS=10.718;HRun=0;HaplotypeScore=224.4047;InbreedingCoeff=0.8409;MQ=61.55;MQ0=0;MQRankSum=-16.764;QD=84.06;ReadPosRankSum=4.102;VQSLOD=3.1779;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,22:22:32.59:1432,33,0	1/1:0,9:9:18.06:746,18,0	0/0:10,0:10:27.02:0,27,778	0/0:7,0:7:15.02:0,15,446	0/0:23,0:23:69.23:0,69,3829	0/0:29,0:29:87.24:0,87,4820	0/0:23,0:23:69.24:0,69,4094	0/0:32,0:32:87.30:0,87,4951	0/0:27,0:27:81.26:0,81,4781	0/0:24,0:24:69.23:0,69,4127	0/0:30,0:30:90.31:0,90,5587	1/1:0,23:23:48.16:1971,48,0	1/1:0,24:24:63.22:2615,63,0	0/0:25,0:25:72.24:0,72,4057	1/1:0,29:29:66.23:2727,66,0	0/1:1,18:19:99:2062,0,140	1/1:0,11:11:24.08:993,24,0	0/1:1,10:11:17.70:345,0,18	0/0:17,0:17:51.18:0,51,2741	0/0:31,0:31:93.32:0,93,5528	0/0:22,0:22:60.16:0,60,3667	1/1:0,18:18:30.10:1248,30,0	1/1:0,12:12:27.09:1114,27,0	1/1:0,15:15:24.08:971,24,0	0/0:24,0:24:72.22:0,72,3605	0/0:30,0:30:90.31:0,90,5840	0/0:37,0:37:99:0,111,6802	0/0:8,0:8:24.05:0,24,1273
chr10	51663932	.	ATGCGCGTGCG	A	1393.62	PASS	AB=1.000;AC=19;AF=0.352;AN=54;BaseQRankSum=6.950;DP=353;FS=11.952;HRun=0;HaplotypeScore=120.9991;InbreedingCoeff=0.7535;MQ=63.62;MQ0=0;MQRankSum=-4.629;QD=11.06;ReadPosRankSum=1.381;VQSLOD=1.9128;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:26:40.97:41,0,813	1/1:10,0:10:3.01:76,3,0	0/0:10,0:7:10.54:0,11,167	0/0:12,0:7:6.02:0,6,102	0/0:13,0:13:35.99:0,36,650	0/0:15,0:15:36.07:0,36,1232	0/0:15,0:15:39.09:0,39,1469	0/0:26,0:26:60.05:0,60,1472	0/0:10,0:10:30.01:0,30,669	0/0:15,0:15:39.09:0,39,1564	0/0:12,0:12:30.05:0,30,925	1/1:4,5:9:8.99:212,9,0	1/1:2,2:4:5.98:116,6,0	0/0:4,0:4:6:0,6,146	1/1:12,0:12:9.03:234,9,0	1/1:13,0:13:14.77:209,15,0	1/1:4,13:17:8.98:210,9,0	1/1:2,13:15:9.03:285,9,0	0/0:11,0:11:24.02:0,24,475	0/0:9,0:9:27.04:0,27,710	0/0:8,0:8:21.04:0,21,825	1/1:6,6:12:8.93:135,9,0	1/1:6,2:8:3.01:61,3,0	./.	0/0:14,0:14:39.02:0,39,851	0/0:11,0:11:30.09:0,30,1225	0/0:14,0:14:39.02:0,39,974	0/0:14,0:14:32.96:0,33,448
chr10	51663937	.	CGTGCGTGCGCGCGCGT	C	1381.54	PASS	AB=0.958;AC=14;AF=0.259;AN=54;BaseQRankSum=6.766;DP=320;FS=9.755;HRun=0;HaplotypeScore=140.1679;InbreedingCoeff=0.6426;MQ=61.21;MQ0=1;MQRankSum=-6.279;QD=17.71;ReadPosRankSum=1.422;VQSLOD=2.1721;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:23.88:0,24,2018	1/1:0,9:10:3.01:143,3,0	0/0:9,0:6:11.32:0,11,287	0/0:9,0:5:6.02:0,6,144	0/0:13,0:13:36.07:0,36,1129	0/0:13,0:13:36.08:0,36,1905	0/0:16,0:16:42.13:0,42,2592	0/0:21,0:21:63.11:0,63,2503	0/0:10,0:10:30.08:0,30,1133	0/0:13,0:13:39.13:0,39,2500	0/0:11,0:11:30.09:0,30,1515	1/1:8,0:8:8.96:70,9,0	0/1:3,0:3:23.36:50,0,23	0/0:4,0:4:6.02:0,6,249	1/1:1,6:9:9.03:426,9,0	1/1:3,3:8:14.97:354,15,0	1/1:15,0:15:6.02:176,6,0	1/1:14,0:14:9.03:282,9,0	0/0:8,0:8:24.04:0,24,794	0/0:10,0:10:30.08:0,30,1367	0/0:8,0:8:21.07:0,21,1366	0/1:10,0:11:19.41:49,0,19	0/0:6,0:6:2.80:0,3,13	./.	0/0:16,0:15:45.09:0,45,1708	0/0:10,0:10:30.09:0,30,1882	0/0:15,0:15:42.14:0,42,1931	0/0:13,0:12:33.04:0,33,767
chr10	51663962	.	GCACACA	G	89.04	PASS	AC=12;AF=0.231;AN=52;BaseQRankSum=4.391;DP=360;FS=7.261;HRun=0;HaplotypeScore=100.5644;InbreedingCoeff=0.5605;MQ=48.76;MQ0=13;MQRankSum=-2.653;QD=1.04;ReadPosRankSum=0.639;VQSLOD=1.1185;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:20,5:24:0.47:1,0,0	1/1:7,0:7:3.01:42,3,0	./.	./.	0/0:11,0:11:6.02:0,6,193	0/0:12,0:11:8.70:0,9,193	0/0:19,0:18:24.08:0,24,714	0/0:21,0:19:20.79:0,21,194	0/0:4,0:4:3.01:0,3,89	0/0:14,0:13:18.95:0,19,440	0/0:10,0:10:15.05:0,15,401	0/0:9,0:9:2.87:0,3,15	0/0:5,0:3:3.01:0,3,71	0/0:9,0:11:12.04:0,12,268	1/1:10,5:14:5.62:84,6,0	1/1:6,3:9:3.01:44,3,0	0/0:25,0:24:39.21:0,39,756	0/0:17,0:17:35.25:0,35,764	0/0:9,0:8:12.04:0,12,264	0/0:13,0:12:18.06:0,18,471	0/0:18,0:19:8.96:0,9,254	1/1:20,0:18:5.92:39,6,0	1/1:10,0:9:0.47:1,0,0	0/0:20,0:19:3.01:0,3,72	0/0:12,0:11:18.06:0,18,557	0/0:14,0:14:19.74:0,20,271	0/0:12,0:12:15.05:0,15,391	0/0:6,0:5:9.03:0,9,254
chr10	51664009	.	C	CTT	906.24	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=3.922;DP=441;FS=20.157;HRun=0;HaplotypeScore=86.1391;InbreedingCoeff=0.8518;MQ=56.76;MQ0=14;MQRankSum=-0.346;QD=14.16;ReadPosRankSum=-2.822;VQSLOD=1.4850;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:18:30.10:0,30,454	0/0:6,0:6:15.04:0,15,210	0/0:17,0:8:24.08:0,24,381	0/0:18,0:10:0.04:0,0,228	0/0:14,0:14:33.11:0,33,493	0/0:16,0:15:36.10:0,36,508	0/0:14,0:13:39.12:0,39,590	0/0:21,0:20:57.58:0,58,851	0/0:6,0:6:18.06:0,18,266	0/0:19,0:17:48.43:0,48,619	0/0:8,0:8:21.06:0,21,300	1/1:5,3:8:6.49:76,6,0	1/1:9,1:9:27.09:453,27,0	0/0:12,0:12:18.05:0,18,256	0/0:11,0:10:9.01:0,9,100	0/0:20,0:20:36.11:0,36,533	0/0:35,0:34:70.89:0,71,849	0/0:27,0:27:70.04:0,70,783	0/0:14,0:14:42.14:0,42,657	0/0:13,0:12:27.09:0,27,417	0/0:32,0:32:66.29:0,66,904	1/1:12,0:18:20.34:135,20,0	1/1:4,5:8:3.01:37,3,0	1/1:16,0:16:24.08:364,24,0	0/0:16,0:15:39.13:0,39,615	0/0:15,0:15:42.93:0,43,603	0/0:17,0:16:45.15:0,45,670	0/0:7,0:7:18.06:0,18,282
chr10	51664210	.	TG	T	3438.56	PASS	AB=0.524;AC=7;AF=0.125;AN=56;BaseQRankSum=13.399;DP=665;FS=2.452;HRun=3;HaplotypeScore=80.9246;InbreedingCoeff=0.8366;MQ=84.89;MQ0=0;MQRankSum=-1.409;QD=34.73;ReadPosRankSum=0.961;VQSLOD=4.2395;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,29:30:81.26:1051,81,0	1/1:0,9:9:24.08:311,24,0	0/0:20,0:20:60.19:0,60,852	0/0:24,0:24:69.22:0,69,1005	0/0:18,0:18:48.15:0,48,692	0/0:26,0:26:78.25:0,78,1146	0/0:19,0:19:57.19:0,57,852	0/0:31,0:31:90.30:0,90,1332	0/0:20,0:20:57.19:0,57,854	0/0:24,0:24:72.24:0,72,1065	0/0:14,0:14:42.14:0,42,629	0/0:22,0:22:66.21:0,66,967	0/0:23,0:23:66.17:0,66,938	0/0:25,0:25:72.22:0,72,1033	1/1:1,37:38:99:1363,105,0	0/1:2,20:22:23.73:713,0,24	0/0:31,0:31:90.30:0,90,1346	0/0:31,0:31:84.27:0,84,1237	0/0:31,0:31:87.01:0,87,1259	0/0:17,0:17:51.17:0,51,764	0/0:39,0:39:99:0,117,1750	0/0:16,0:16:45.11:0,45,647	0/0:12,0:12:36.12:0,36,539	0/0:26,0:26:75.24:0,75,1103	0/0:15,0:15:45.15:0,45,674	0/0:34,0:34:99:0,99,1483	0/0:38,0:38:99:0,111,1640	0/0:10,0:10:30.10:0,30,441
chr10	51664465	.	GC	G	4666.19	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=9.880;DP=792;FS=11.825;HRun=3;HaplotypeScore=134.6668;InbreedingCoeff=0.9961;MQ=85.03;MQ0=0;MQRankSum=-3.888;QD=33.57;ReadPosRankSum=2.289;VQSLOD=2.9789;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,141,1941	1/1:0,6:6:15.05:184,15,0	0/0:30,0:30:84.27:0,84,1180	0/0:26,0:26:51.71:0,52,824	0/0:21,0:21:54.18:0,54,776	0/0:15,0:15:36.12:0,36,517	0/0:36,0:36:99:0,102,1448	0/0:37,0:37:99:0,102,1385	0/0:31,0:31:93.24:0,93,1293	0/0:26,0:26:75.25:0,75,1071	0/0:18,0:18:51.14:0,51,696	0/0:29,0:29:75.25:0,75,1041	0/0:42,0:42:99:0,123,1697	0/0:37,0:37:99:0,105,1483	1/1:2,43:45:99:1384,114,0	1/1:1,30:31:90.25:1091,90,0	1/1:0,31:31:90.28:1115,90,0	1/1:0,26:26:72.23:892,72,0	0/0:18,0:17:51.16:0,51,712	0/0:20,0:20:60.20:0,60,861	0/0:45,0:45:99:0,129,1835	0/0:23,0:23:69.18:0,69,921	0/0:22,0:22:63.18:0,63,848	0/0:41,0:41:99:0,120,1659	0/0:18,0:18:51.16:0,51,714	0/0:31,0:30:93.18:0,93,1274	0/0:30,0:30:87.22:0,87,1186	0/0:10,0:10:30.10:0,30,432
chr10	51665000	.	G	GGT	10230.86	PASS	AB=0.537;AC=17;AF=0.304;AN=56;BaseQRankSum=3.420;DP=798;FS=5.227;HRun=0;HaplotypeScore=113.0259;InbreedingCoeff=0.9228;MQ=74.69;MQ0=0;MQRankSum=-7.079;QD=38.90;ReadPosRankSum=4.185;VQSLOD=6.8073;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,0:54:47.18:1269,47,0	1/1:1,0:21:57.12:584,57,0	0/0:31,0:31:78.18:0,78,1217	0/0:22,0:21:51.34:0,51,718	0/0:30,0:30:87.26:0,87,1322	0/0:23,0:23:69.06:0,69,1017	0/0:31,0:31:93.27:0,93,1412	0/0:22,0:22:66.20:0,66,1005	0/0:20,0:20:57.19:0,57,892	0/0:38,0:38:99:0,111,1648	0/0:19,0:19:57.19:0,57,907	1/1:0,32:32:90.31:1826,90,0	1/1:0,32:34:78.27:1579,78,0	0/0:31,0:31:90.28:0,90,1388	1/1:1,0:25:52.26:631,52,0	0/1:3,1:22:10.37:458,0,10	0/0:38,0:38:99:0,111,1717	0/0:30,0:29:90.27:0,90,1403	0/0:19,0:19:54.15:0,54,793	0/0:24,0:24:69.23:0,69,1057	0/0:36,0:36:99:0,105,1615	1/1:1,22:24:57.19:1129,57,0	1/1:2,22:25:69.24:1356,69,0	1/1:1,24:26:69.24:1400,69,0	0/0:42,0:42:99:0,119,1793	0/0:33,0:33:96.03:0,96,1467	0/0:32,0:32:96.27:0,96,1426	0/0:13,0:13:39.12:0,39,584
chr10	51666178	.	G	GGAAA	2807.68	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=10.905;DP=713;FS=9.557;HRun=0;HaplotypeScore=157.0850;InbreedingCoeff=0.9812;MQ=59.05;MQ0=3;MQRankSum=-5.007;QD=40.11;ReadPosRankSum=0.027;VQSLOD=3.7565;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:60.15:0,60,886	1/1:13,2:15:33.06:452,33,0	0/0:23,0:9:12:0,12,129	0/0:15,0:9:15.49:0,15,179	0/0:40,0:40:99:0,102,1521	0/0:28,0:28:69.19:0,69,1080	0/0:22,0:22:22.35:0,22,672	0/0:31,0:31:54.10:0,54,686	0/0:17,0:17:51.13:0,51,755	0/0:36,0:36:81.27:0,81,1323	0/0:24,0:24:57.17:0,57,903	0/0:26,0:26:42.33:0,42,898	0/0:31,0:31:87.24:0,87,1325	0/0:25,0:25:60.19:0,60,969	1/1:23,6:29:75.15:1168,75,0	1/1:17,9:26:72.20:1331,72,0	0/0:39,0:39:40.10:0,40,1030	0/0:34,0:34:74.96:0,75,1098	0/0:18,0:18:30.08:0,30,435	0/0:37,0:37:93.27:0,93,1460	0/0:10,0:10:30.09:0,30,474	0/0:22,0:22:57.18:0,57,901	0/0:23,0:24:45.03:0,45,629	0/0:30,0:30:63.19:0,63,992	0/0:13,0:13:39.05:0,39,597	0/0:28,0:28:69.22:0,69,1110	0/0:35,0:35:90.22:0,90,1331	0/0:10,0:10:21.54:0,22,354
chr10	51666200	.	G	GAAGA	2979.19	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.190;DP=725;FS=16.360;HRun=0;HaplotypeScore=155.5534;InbreedingCoeff=0.9978;MQ=62.11;MQ0=7;MQRankSum=-4.310;QD=39.72;ReadPosRankSum=0.015;VQSLOD=3.1408;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:57.16:0,57,929	1/1:11,2:13:30.98:558,31,0	0/0:30,0:15:31.03:0,31,358	0/0:34,0:20:20.88:0,21,442	0/0:37,0:37:89.95:0,90,1455	0/0:24,0:24:63.15:0,63,1012	0/0:22,0:22:60.12:0,60,931	0/0:28,0:28:60.18:0,60,953	0/0:18,0:18:45.14:0,45,744	0/0:36,0:36:93.27:0,93,1469	0/0:20,0:20:60.21:0,60,1028	0/0:25,0:25:60.11:0,60,935	0/0:28,0:28:72.25:0,72,1242	0/0:24,0:24:66.21:0,66,1092	1/1:28,6:34:77.80:1211,78,0	1/1:19,9:28:70.03:1354,70,0	0/0:38,0:37:72.59:0,73,905	0/0:35,0:35:67.60:0,68,962	0/0:14,0:14:30.07:0,30,466	0/0:36,0:36:99:0,102,1673	0/0:17,0:17:45.11:0,45,695	0/0:23,0:23:60.17:0,60,954	0/0:21,0:21:53.34:0,53,780	0/0:26,0:26:66.11:0,66,1069	0/0:16,0:16:48.15:0,48,771	0/0:27,0:27:75.22:0,75,1195	0/0:35,0:35:90.29:0,90,1505	0/0:10,0:10:30.10:0,30,505
chr10	51666811	.	GAA	G	1397.74	PASS	AB=0.863;AC=15;AF=0.268;AN=56;BaseQRankSum=4.962;DP=545;FS=3.577;HRun=13;HaplotypeScore=78.1316;InbreedingCoeff=0.5410;MQ=72.75;MQ0=5;MQRankSum=-0.840;QD=8.63;ReadPosRankSum=4.976;VQSLOD=1.3864;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:23:37.02:0,37,144	0/1:6,1:10:2.55:3,0,238	0/0:16,0:11:14.30:0,14,118	0/1:15,1:13:23.01:23,0,124	0/0:22,0:22:22.33:0,22,534	0/0:14,1:17:15:0,15,490	0/1:15,4:21:60.32:60,0,500	0/0:31,0:36:76.69:0,77,985	0/0:19,0:22:59.12:0,59,751	0/0:18,0:20:44.55:0,45,522	0/0:15,0:19:38.40:0,38,567	1/1:3,10:12:26.99:262,27,0	1/1:3,13:19:17.82:319,18,0	0/1:12,2:14:31.25:31,0,205	0/0:7,1:22:24.65:0,25,460	0/0:3,0:15:32.54:0,33,306	0/0:27,0:27:72.20:0,72,980	0/0:9,0:12:26.57:0,27,340	0/1:14,2:16:19.04:19,0,416	0/0:17,1:24:29.51:0,30,635	0/0:11,1:13:3.48:0,3,340	1/1:5,13:20:26.67:245,27,0	1/1:2,13:19:37.78:309,38,0	1/1:1,12:14:26.98:312,27,0	0/0:16,1:19:26.54:0,27,647	0/0:18,0:22:46.58:0,47,550	0/0:33,0:35:89.62:0,90,1279	0/0:13,0:17:37.58:0,38,445
chr10	51667171	.	C	CA	1195.86	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-5.525;DP=659;FS=3.587;HRun=1;HaplotypeScore=71.5104;InbreedingCoeff=0.9979;MQ=76.12;MQ0=0;MQRankSum=-3.746;QD=42.71;ReadPosRankSum=0.024;VQSLOD=3.8881;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,28:28:81.28:1291,81,0	0/0:15,0:15:45.15:0,45,628	0/0:18,0:18:44.80:0,45,609	0/0:10,0:10:27.08:0,27,357	0/0:38,0:38:99:0,111,1550	0/0:21,0:21:63.21:0,63,873	0/0:19,0:19:57.18:0,57,778	0/0:44,0:44:99:0,132,1798	0/0:23,0:23:69.23:0,69,962	0/0:23,0:23:69.19:0,69,939	0/0:32,0:32:93.31:0,93,1298	0/0:22,0:22:60.20:0,60,838	0/0:23,0:23:63.12:0,63,836	0/0:26,0:26:78.26:0,78,1089	0/0:31,0:31:84.16:0,84,1126	0/0:19,0:19:57.19:0,57,796	0/0:21,0:21:63.18:0,63,860	0/0:19,0:19:53.85:0,54,751	0/0:17,0:17:51.17:0,51,711	0/0:35,0:35:99:0,99,1353	0/0:20,0:20:57.14:0,57,771	0/0:17,0:17:51.17:0,51,712	0/0:21,0:21:60.19:0,60,823	0/0:21,0:21:63.21:0,63,877	0/0:33,0:33:99:0,99,1345	0/0:29,0:29:87.29:0,87,1214	0/0:25,0:25:72.11:0,72,978	0/0:9,0:9:27.09:0,27,377
chr10	51667762	.	A	AT	490.98	PASS	AC=8;AF=0.148;AN=54;BaseQRankSum=2.703;DP=214;FS=6.561;HRun=5;HaplotypeScore=31.4466;InbreedingCoeff=0.7570;MQ=86.30;MQ0=1;MQRankSum=-1.473;QD=23.38;ReadPosRankSum=-0.755;VQSLOD=1.7340;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:5:9.02:0,9,97	0/0:9,0:9:21.05:0,21,225	0/0:14,0:11:10.21:0,10,249	0/0:11,0:7:11.98:0,12,110	0/0:6,0:6:15.02:0,15,153	0/0:4,0:4:6.01:0,6,64	0/0:4,0:4:12.03:0,12,129	0/0:27,0:27:72.18:0,72,774	0/0:7,0:7:18.04:0,18,193	0/0:10,0:10:21.05:0,21,225	0/0:12,0:12:33.08:0,33,355	1/1:0,5:5:12.04:158,12,0	1/1:0,10:10:24.08:316,24,0	0/0:4,0:4:12.03:0,12,129	0/0:6,0:6:15.04:0,15,161	0/0:10,0:10:24.06:0,24,258	0/0:13,0:13:18.03:0,18,185	0/0:11,0:11:27.07:0,27,290	0/0:8,0:8:24.06:0,24,258	0/0:8,0:8:21.05:0,21,226	0/0:3,0:3:6.01:0,6,64	./.	1/1:1,2:3:6.02:79,6,0	1/1:0,3:3:6.02:79,6,0	0/0:5,0:5:15.04:0,15,161	0/0:5,0:5:12.03:0,12,129	0/0:7,0:7:18.04:0,18,193	0/0:2,0:2:3.01:0,3,32
chr10	51667790	.	TAC	T	433.26	PASS	AB=1.000;AC=16;AF=0.400;AN=40;BaseQRankSum=2.452;DP=106;FS=6.603;HRun=0;HaplotypeScore=23.2587;InbreedingCoeff=0.2656;MQ=67.22;MQ0=2;MQRankSum=-1.053;QD=5.28;ReadPosRankSum=-0.914;VQSLOD=0.7371;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/1:1,0:1:0:0,0,0	1/1:8,0:1:2.04:6,2,0	0/1:13,0:6:11.70:13,0,12	0/0:3,0:3:6:0,6,51	0/0:2,0:2:6:0,6,56	0/0:2,0:2:3:0,3,25	0/1:25,0:24:93.92:94,0,373	./.	0/0:2,2:4:4.99:0,5,35	./.	./.	1/1:2,0:2:3:25,3,0	./.	0/0:1,0:2:2.95:0,3,19	1/1:2,0:2:1.25:4,1,0	1/1:0,9:9:3.01:46,3,0	1/1:12,0:12:32.83:254,33,0	0/0:4,0:4:7.82:0,8,59	0/0:1,0:1:3:0,3,25	0/0:1,0:1:3:0,3,25	./.	./.	./.	1/1:4,0:4:11.93:89,12,0	0/0:1,0:1:3:0,3,28	0/0:2,0:2:6:0,6,58	0/1:6,0:6:8.09:28,0,8
chr10	51671017	.	CAGAG	C	225.09	PASS	AB=0.937;AC=5;AF=0.100;AN=50;BaseQRankSum=1.791;DP=606;FS=1.467;HRun=0;HaplotypeScore=95.3592;InbreedingCoeff=0.3204;MQ=77.89;MQ0=8;MQRankSum=0.216;QD=2.53;ReadPosRankSum=0.634;VQSLOD=1.6149;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:3.48:0,3,49	./.	0/0:60,0:31:0.47:0,0,1	0/0:70,0:29:0.47:0,0,1	0/0:15,0:15:9:0,9,94	0/0:17,0:17:15.05:0,15,252	0/0:22,0:23:8.77:0,9,130	0/0:21,0:21:3.63:0,4,10	0/1:19,2:21:28.35:28,0,240	0/0:14,0:14:13.21:0,13,142	./.	0/0:18,0:18:9.03:0,9,143	0/0:12,0:11:0.47:0,0,1	0/0:24,0:24:21.05:0,21,363	0/0:19,0:19:6.01:0,6,86	0/0:14,0:23:9.03:0,9,157	0/1:23,2:26:0.78:106,0,1	1/1:15,5:19:12.04:184,12,0	./.	0/1:22,0:22:18.87:19,0,66	0/0:19,0:19:9:0,9,99	0/0:20,0:19:12.04:0,12,200	0/0:17,0:17:12.04:0,12,179	0/0:15,0:15:3.01:0,3,50	0/0:17,0:17:9.03:0,9,139	0/0:21,0:21:23.35:0,23,346	0/0:24,0:24:20.78:0,21,285	0/0:12,0:11:15.03:0,15,202
chr10	51673271	.	A	AAAAAC	3140.25	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=5.365;DP=636;FS=1.032;HRun=0;HaplotypeScore=119.9847;InbreedingCoeff=0.9962;MQ=73.92;MQ0=0;MQRankSum=-3.538;QD=38.30;ReadPosRankSum=2.215;VQSLOD=3.6018;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,23:28:54.10:1458,54,0	0/0:10,0:10:24.08:0,24,452	0/0:22,0:20:23.95:0,24,334	0/0:16,0:15:24.54:0,25,503	0/0:37,0:37:81.72:0,82,1449	0/0:21,0:21:57.17:0,57,982	0/0:19,0:19:48.13:0,48,841	0/0:30,0:30:66.16:0,66,1033	0/0:23,0:23:54.16:0,54,928	0/0:26,0:26:69.17:0,69,1224	0/0:23,0:23:63.20:0,63,1127	0/0:12,0:12:33.11:0,33,620	0/0:20,0:20:54.16:0,54,954	0/0:23,0:23:60.19:0,60,1071	0/0:25,0:25:60.17:0,60,1037	0/0:19,0:18:57.17:0,57,1005	1/1:30,0:30:69.23:964,69,0	1/1:24,0:24:63.21:861,63,0	0/0:18,0:18:42.11:0,42,700	0/0:36,0:36:99:0,99,1742	0/0:8,0:8:21.01:0,21,323	0/0:24,0:24:57.11:0,57,934	0/0:21,0:21:51.17:0,51,913	0/0:25,0:25:69.16:0,69,1187	0/0:25,0:25:72.24:0,72,1328	0/0:34,0:34:87.28:0,87,1567	0/0:26,0:26:66.20:0,66,1173	0/0:11,0:11:33.11:0,33,622
chr10	51673272	.	A	AAAAAC	4513.33	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=-5.572;DP=639;FS=0.000;HRun=0;HaplotypeScore=114.6707;InbreedingCoeff=0.7783;MQ=74.50;MQ0=0;MQRankSum=-2.294;QD=53.10;ReadPosRankSum=3.979;VQSLOD=4.9370;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:28:61.58:578,0,62	0/0:10,0:10:30.04:0,30,505	0/0:23,0:21:47.76:0,48,585	0/0:16,0:15:22.39:0,22,552	0/0:36,0:36:99:0,100,1719	0/0:22,0:22:63.19:0,63,1099	0/0:18,0:18:54.17:0,54,990	0/0:31,0:31:81.18:0,81,1269	0/0:23,0:23:69.18:0,69,1126	0/0:26,0:26:75.17:0,75,1389	0/0:23,0:23:66.20:0,66,1199	0/0:12,0:12:33.11:0,33,636	0/0:21,0:21:57.17:0,57,1026	0/0:23,0:23:69.20:0,69,1197	0/0:24,0:24:66.19:0,66,1193	0/0:19,0:18:57.19:0,57,1061	1/1:0,32:32:69.24:2037,69,0	1/1:0,24:25:66.23:1898,66,0	0/0:17,0:17:48.14:0,48,852	0/0:36,0:36:99:0,105,1904	0/0:8,0:8:23.99:0,24,377	0/0:25,0:25:69.16:0,69,1151	0/0:21,0:21:60.18:0,60,1049	0/0:25,0:25:75.09:0,75,1259	0/0:25,0:25:75.25:0,75,1391	0/0:33,0:33:96.28:0,96,1698	0/0:26,0:26:78.24:0,78,1370	0/0:11,0:11:33.11:0,33,635
chr10	51674260	.	TGG	T	1771.42	PASS	AB=0.761;AC=10;AF=0.179;AN=56;BaseQRankSum=4.984;DP=484;FS=3.402;HRun=11;HaplotypeScore=73.8429;InbreedingCoeff=0.6506;MQ=76.02;MQ0=0;MQRankSum=0.005;QD=13.52;ReadPosRankSum=7.672;VQSLOD=1.4561;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:43:95.43:412,95,0	1/1:2,5:7:12.02:125,12,0	0/0:13,0:12:13.76:0,14,139	0/0:15,0:16:7.81:0,8,121	0/0:18,0:18:39.07:0,39,503	0/0:20,1:24:6.02:0,6,421	0/0:19,0:19:39.13:0,39,585	0/0:16,0:17:35.56:0,36,474	0/0:14,0:14:24.02:0,24,321	0/0:14,0:15:11.53:0,12,147	0/0:15,0:16:23.74:0,24,298	0/0:13,0:13:15.04:0,15,204	0/0:16,0:16:30.09:0,30,433	0/0:11,0:11:24.06:0,24,328	1/1:2,16:19:47.85:491,48,0	1/1:1,29:31:83.79:874,84,0	0/0:15,1:34:6.54:0,7,164	0/1:7,1:20:25.27:25,0,82	0/0:16,0:18:22.86:0,23,225	0/1:10,0:11:5.36:5,0,188	0/0:13,0:13:33.09:0,33,482	0/0:11,0:11:21.04:0,21,276	0/0:5,0:5:9.01:0,9,116	0/0:10,0:12:27.06:0,27,355	0/0:18,0:20:50.62:0,51,659	0/0:20,0:20:27.07:0,27,371	0/0:17,1:18:1.08:0,1,304	0/0:6,0:8:20.55:0,21,268
chr10	51675170	.	G	GACC	5890.90	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-3.981;DP=817;FS=0.862;HRun=0;HaplotypeScore=117.2865;InbreedingCoeff=0.9999;MQ=82.82;MQ0=0;MQRankSum=-3.967;QD=62.67;ReadPosRankSum=1.994;VQSLOD=6.5712;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,157,2661	1/1:2,20:22:60.10:1368,60,0	0/0:30,0:30:73.39:0,73,1046	0/0:21,0:21:32.97:0,33,458	0/0:24,0:24:69.19:0,69,1142	0/0:23,0:23:69.22:0,69,1151	0/0:23,0:23:69.22:0,69,1151	0/0:29,0:29:75.26:0,75,1277	0/0:24,0:24:69.24:0,69,1177	0/0:44,0:44:99:0,129,2174	0/0:23,0:23:69.24:0,69,1172	0/0:38,0:38:99:0,108,1790	0/0:44,0:44:99:0,132,2224	0/0:28,0:28:81.28:0,81,1378	1/1:3,28:32:87.30:1975,87,0	1/1:6,34:40:99:2549,114,0	0/0:32,0:32:90.29:0,90,1503	0/0:23,0:23:69.24:0,69,1165	0/0:17,0:17:48.16:0,48,819	0/0:28,0:28:84.29:0,84,1433	0/0:37,0:37:99:0,105,1787	0/0:14,0:14:39.12:0,39,638	0/0:19,0:19:54.18:0,54,921	0/0:31,0:31:87.30:0,87,1484	0/0:39,0:39:99:0,111,1866	0/0:35,0:35:99:0,102,1634	0/0:25,0:24:72.25:0,72,1228	0/0:20,0:20:60.21:0,60,1023
chr10	51675684	.	GT	G	3395.37	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=14.311;DP=736;FS=1.938;HRun=1;HaplotypeScore=90.3267;InbreedingCoeff=0.9971;MQ=89.86;MQ0=0;MQRankSum=-2.063;QD=41.41;ReadPosRankSum=1.574;VQSLOD=3.9901;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,153,2384	1/1:0,21:21:63.21:880,63,0	0/0:27,0:27:78.24:0,78,1199	0/0:29,0:29:74.40:0,74,1186	0/0:21,0:21:63.21:0,63,1007	0/0:21,0:21:63.21:0,63,997	0/0:20,0:20:60.20:0,60,959	0/0:26,0:26:78.25:0,78,1200	0/0:36,0:36:99:0,105,1596	0/0:33,0:33:99:0,99,1582	0/0:13,0:13:39.12:0,39,600	0/0:27,0:27:81.28:0,81,1275	0/0:32,0:32:96.30:0,96,1486	0/0:38,0:38:99:0,114,1814	1/1:0,35:35:99:1467,105,0	1/1:0,26:26:75.25:1049,75,0	0/0:23,0:23:69.24:0,69,1103	0/0:26,0:26:78.22:0,78,1219	0/0:23,0:22:69.22:0,69,1071	0/0:20,0:20:60.20:0,60,957	0/0:21,0:21:63.21:0,63,996	0/0:25,0:25:75.26:0,75,1188	0/0:25,0:25:72.16:0,72,1120	0/0:26,0:26:78.27:0,78,1246	0/0:26,0:26:78.27:0,78,1247	0/0:30,0:30:90.31:0,90,1427	0/0:29,0:29:87.25:0,87,1311	0/0:6,0:6:18.06:0,18,287
chr10	51676358	.	TC	T	1658.05	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=6.824;DP=601;FS=1.801;HRun=1;HaplotypeScore=62.0128;InbreedingCoeff=0.9912;MQ=90.30;MQ0=1;MQRankSum=-1.458;QD=33.16;ReadPosRankSum=1.377;VQSLOD=3.3869;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:72.18:0,72,968	1/1:1,5:6:15.05:209,15,0	0/0:32,0:31:69.78:0,70,911	0/0:20,0:20:39.80:0,40,641	0/0:18,0:18:54.06:0,54,706	0/0:27,0:27:81.24:0,81,1115	0/0:24,0:24:72.18:0,72,952	0/0:35,0:35:99:0,105,1438	0/0:19,0:19:57.16:0,57,773	0/0:24,0:24:72.22:0,72,983	0/0:22,0:22:66.21:0,66,925	0/0:19,0:19:56.99:0,57,748	0/0:19,0:19:57.19:0,57,814	0/0:28,0:28:83.30:0,83,1146	1/1:3,15:18:54.15:707,54,0	1/1:7,19:26:29.35:883,29,0	0/0:37,0:37:99:0,111,1547	0/0:30,0:30:87.21:0,87,1199	0/0:17,0:17:51.17:0,51,729	0/0:27,0:27:81.25:0,81,1120	0/0:16,0:16:48.02:0,48,586	0/0:15,0:15:45.14:0,45,625	0/0:18,0:18:54.17:0,54,750	0/0:17,0:17:51.16:0,51,711	0/0:12,0:12:36.10:0,36,494	0/0:18,0:18:51.17:0,51,728	0/0:26,0:26:75.22:0,75,1048	0/0:6,0:6:18.06:0,18,257
chr10	51676452	.	A	AT	1979.83	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.894;DP=567;FS=5.250;HRun=1;HaplotypeScore=60.8953;InbreedingCoeff=0.9988;MQ=86.80;MQ0=0;MQRankSum=-4.110;QD=36.66;ReadPosRankSum=1.002;VQSLOD=4.0394;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:81.26:0,81,1050	1/1:0,9:9:24.08:349,24,0	0/0:20,0:20:51.02:0,51,576	0/0:17,0:18:37.29:0,37,457	0/0:17,0:17:51.15:0,51,645	0/0:21,0:21:60.20:0,60,779	0/0:20,0:20:57.16:0,57,711	0/0:25,0:25:75.23:0,75,951	0/0:18,0:18:51.15:0,51,648	0/0:16,0:16:48.16:0,48,623	0/0:15,0:15:45.15:0,45,584	0/0:24,0:24:69.20:0,69,867	0/0:21,0:21:63.20:0,63,818	0/0:27,0:27:78.25:0,78,1012	1/1:2,17:19:54.17:767,54,0	1/1:1,25:26:69.23:1007,69,0	0/0:18,0:18:51.15:0,51,647	0/0:16,0:16:48.14:0,48,608	0/0:19,0:19:57.18:0,57,728	0/0:16,0:16:45.14:0,45,572	0/0:44,0:44:99:0,129,1645	0/0:13,0:13:39.11:0,39,490	0/0:18,0:18:51.17:0,51,661	0/0:30,0:30:90.24:0,90,1135	0/0:17,0:17:51.14:0,51,645	0/0:14,0:14:36.12:0,36,467	0/0:28,0:28:84.27:0,84,1091	0/0:10,0:10:27.09:0,27,350
chr10	51676796	.	GAA	G	1529.50	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.376;DP=541;FS=7.370;HRun=10;HaplotypeScore=75.2946;InbreedingCoeff=0.9861;MQ=77.55;MQ0=0;MQRankSum=0.571;QD=26.37;ReadPosRankSum=4.645;VQSLOD=3.4113;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:63.14:0,63,945	1/1:1,11:12:33.09:368,33,0	0/0:14,0:14:29.77:0,30,417	0/0:9,0:10:12.18:0,12,220	0/0:20,0:21:60.17:0,60,888	0/0:15,0:16:38.61:0,39,559	0/0:22,0:22:57.17:0,57,860	0/0:32,0:32:84.25:0,84,1266	0/0:20,0:20:54.18:0,54,835	0/0:23,0:23:63.20:0,63,951	0/0:16,0:17:47.65:0,48,718	0/0:16,0:16:48.16:0,48,756	0/0:16,0:16:42.13:0,42,639	0/0:19,0:19:57.19:0,57,901	1/1:2,21:23:63.17:702,63,0	1/1:2,21:23:54.14:602,54,0	0/0:2,0:27:63.10:0,63,599	0/0:4,0:26:72.09:0,72,689	0/0:21,0:21:51.17:0,51,806	0/0:23,0:23:57.19:0,57,903	0/0:7,0:7:18.06:0,18,286	0/0:16,0:17:51.13:0,51,706	0/0:27,0:27:75.24:0,75,1148	0/0:13,0:13:39.13:0,39,619	0/0:22,0:22:60.19:0,60,905	0/0:17,0:18:48.14:0,48,704	0/0:24,0:24:69.24:0,69,1095	0/0:10,0:10:30.10:0,30,476
chr10	51676954	.	TAAA	T	1536.24	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=7.545;DP=562;FS=1.228;HRun=12;HaplotypeScore=82.5710;InbreedingCoeff=0.9384;MQ=72.67;MQ0=0;MQRankSum=-0.870;QD=22.26;ReadPosRankSum=4.171;VQSLOD=2.5707;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,24:26:40.51:733,41,0	0/0:8,0:8:21.07:0,21,414	0/0:16,0:16:29.80:0,30,392	0/0:14,0:11:3.19:0,3,164	0/0:28,0:29:72.23:0,72,1332	0/0:21,0:21:57.20:0,57,1097	0/0:16,0:16:48.16:0,48,947	0/0:31,0:31:66.17:0,66,1196	0/0:18,0:18:48.15:0,48,903	0/0:22,0:22:60.19:0,60,1135	0/0:12,0:14:33.11:0,33,618	0/0:21,0:22:60.18:0,60,1133	0/0:17,0:17:48.16:0,48,916	0/0:27,0:27:75.25:0,75,1405	0/0:26,0:26:60.21:0,60,1167	0/0:28,0:28:72.23:0,72,1379	1/1:2,15:17:27.07:341,27,0	1/1:4,22:26:48.09:604,48,0	0/0:20,0:20:51.17:0,51,973	0/0:22,0:22:60.19:0,60,1135	0/0:9,0:9:21.07:0,21,400	0/0:11,0:11:30.08:0,30,542	0/0:25,0:27:75.26:0,75,1393	0/0:10,0:10:27.09:0,27,523	0/0:30,0:30:81.27:0,81,1527	0/0:17,0:17:42.14:0,42,828	0/0:22,0:22:54.17:0,54,1011	0/0:13,0:13:36.11:0,36,675
chr10	51677570	.	C	CT	2357.58	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=14.401;DP=768;FS=5.401;HRun=2;HaplotypeScore=114.4048;InbreedingCoeff=0.9940;MQ=77.65;MQ0=0;MQRankSum=-11.938;QD=27.10;ReadPosRankSum=-0.468;VQSLOD=3.0360;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,132,1661	1/1:0,11:11:27:287,27,0	0/0:22,0:22:50.35:0,50,691	0/0:22,0:22:60.17:0,60,742	0/0:29,0:29:87.25:0,87,1099	0/0:26,0:26:78.25:0,78,1013	0/0:29,0:29:84.26:0,84,1075	0/0:28,0:28:78.24:0,78,990	0/0:23,0:23:69.19:0,69,867	0/0:26,0:26:78.25:0,78,1000	0/0:24,0:24:72.22:0,72,920	0/0:34,0:34:96.29:0,96,1229	0/0:29,0:29:84.27:0,84,1091	0/0:29,0:29:81.22:0,81,1020	1/1:3,43:46:99:1363,130,0	1/1:2,28:30:78.04:850,78,0	0/0:30,0:30:87.25:0,87,1095	0/0:26,0:26:78.22:0,78,981	0/0:16,0:16:45.15:0,45,584	0/0:19,0:19:51.15:0,51,648	0/0:41,0:41:99:0,123,1507	0/0:30,0:30:87.22:0,87,1082	0/0:20,0:20:57.19:0,57,740	0/0:37,0:36:99:0,105,1361	0/0:25,0:25:72.23:0,72,935	0/0:27,0:27:75.24:0,75,962	0/0:37,0:36:99:0,108,1334	0/0:6,0:6:15.05:0,15,195
chr10	51677573	.	CGTAGAGCTA	C	4353.49	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=12.795;DP=752;FS=1.026;HRun=0;HaplotypeScore=230.5548;InbreedingCoeff=0.9978;MQ=76.41;MQ0=0;MQRankSum=-11.703;QD=55.81;ReadPosRankSum=2.463;VQSLOD=4.6998;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,135,6044	1/1:3,7:10:21.07:493,21,0	0/0:18,0:18:51.17:0,51,2089	0/0:21,0:21:56.37:0,56,2409	0/0:30,0:30:84.26:0,84,3786	0/0:26,0:26:78.25:0,78,3673	0/0:30,0:30:90.28:0,90,4001	0/0:29,0:29:87.28:0,87,3787	0/0:21,0:21:63.22:0,63,2894	0/0:26,0:26:78.26:0,78,3677	0/0:25,0:25:75.26:0,75,3527	0/0:32,0:32:87.28:0,87,4071	0/0:30,0:30:84.29:0,84,3956	0/0:27,0:27:75.24:0,75,3513	1/1:10,32:42:99:2540,105,0	1/1:9,17:26:54.12:1320,54,0	0/0:29,0:29:87.28:0,87,3934	0/0:26,0:26:75.26:0,75,3499	0/0:17,0:17:48.15:0,48,2124	0/0:19,0:19:54.17:0,54,2408	0/0:39,0:39:99:0,108,5009	0/0:28,0:28:78.25:0,78,3621	0/0:21,0:21:51.18:0,51,2377	0/0:38,0:37:99:0,111,4807	0/0:26,0:26:78.25:0,78,3569	0/0:26,0:26:78.26:0,78,3489	0/0:34,0:33:96.32:0,96,4212	0/0:8,0:8:24.08:0,24,1029
chr10	51677774	.	TAA	T	3804.27	PASS	AB=0.538;AC=21;AF=0.375;AN=56;BaseQRankSum=10.969;DP=653;FS=3.710;HRun=13;HaplotypeScore=101.5163;InbreedingCoeff=0.9043;MQ=65.58;MQ0=5;MQRankSum=0.763;QD=14.75;ReadPosRankSum=5.630;VQSLOD=2.8226;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,28:33:59.93:619,60,0	0/1:1,0:7:15.19:24,0,15	0/0:30,0:15:8.28:0,8,138	0/0:24,0:17:7.89:0,8,94	0/0:20,0:27:68.57:0,69,743	0/0:30,0:35:89.23:0,89,1146	0/0:19,0:19:44.73:0,45,600	0/0:20,0:19:48.02:0,48,613	0/0:13,0:14:27.06:0,27,337	0/0:29,0:33:68.16:0,68,862	0/0:19,0:19:44.61:0,45,562	1/1:5,20:24:29.97:340,30,0	1/1:5,19:25:41.54:389,42,0	0/0:10,0:10:27.08:0,27,374	1/1:4,0:25:24.69:106,25,0	1/1:2,0:21:38.33:165,38,0	1/1:3,17:21:41.63:407,42,0	1/1:5,23:31:53.22:538,53,0	0/0:13,0:16:41.57:0,42,480	0/0:34,0:39:99:0,101,1244	0/0:16,0:20:36.02:0,36,318	1/1:1,18:19:48.03:465,48,0	1/1:7,25:34:48.80:577,49,0	1/1:6,10:16:18.01:174,18,0	0/0:22,1:23:28.01:0,28,676	0/0:22,0:22:57.10:0,57,703	0/0:24,0:28:63.72:0,64,737	0/0:12,0:14:32.38:0,32,363
chr10	51678809	.	TAC	T	4425.88	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=12.632;DP=956;FS=3.056;HRun=0;HaplotypeScore=146.2373;InbreedingCoeff=0.9864;MQ=62.25;MQ0=2;MQRankSum=0.366;QD=24.59;ReadPosRankSum=3.879;VQSLOD=5.8527;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:53.94:0,54,789	0/0:11,0:11:27.09:0,27,429	0/0:36,1:29:52.97:0,53,711	0/0:28,0:16:17.41:0,17,287	0/0:42,0:42:93.20:0,93,1391	0/0:22,0:22:60.12:0,60,862	0/0:26,0:26:72.12:0,72,1109	0/0:51,0:51:85.54:0,86,1508	0/0:45,0:45:99:0,114,1721	0/0:40,2:42:30.40:0,30,1462	0/0:31,0:31:69.13:0,69,939	1/1:6,47:53:99:1462,117,0	1/1:4,35:39:75.24:938,75,0	0/0:36,0:36:90.24:0,90,1378	0/0:55,0:55:99:0,129,2077	0/0:54,0:54:43.48:0,43,1086	0/0:24,0:24:48.12:0,48,741	0/0:25,0:25:67.90:0,68,971	0/0:22,1:23:10.67:0,11,630	0/0:27,0:27:44.78:0,45,1081	0/0:38,0:38:84.24:0,84,1307	1/1:6,29:35:69.22:863,69,0	1/1:3,29:32:63.20:788,63,0	1/1:4,17:21:30.10:375,30,0	0/0:35,2:37:43.68:0,44,1134	0/0:31,0:31:49.76:0,50,1241	0/0:39,0:39:99:0,102,1572	0/0:20,0:20:19.09:0,19,740
chr10	51678976	.	CCATACACA	C	6649.82	PASS	AB=0.531;AC=11;AF=0.196;AN=56;BaseQRankSum=14.807;DP=1024;FS=20.008;HRun=0;HaplotypeScore=248.5498;InbreedingCoeff=0.8534;MQ=61.31;MQ0=4;MQRankSum=-14.875;QD=33.25;ReadPosRankSum=-1.127;VQSLOD=3.0695;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:2,27:30:48.16:1109,48,0	1/1:3,14:17:30.10:767,30,0	0/0:42,0:31:66.18:0,66,1386	0/0:36,0:34:86.02:0,86,2198	0/0:25,0:25:66.23:0,66,2437	0/0:22,0:22:51.17:0,51,1996	0/0:36,0:38:96.80:0,97,3375	0/0:55,0:55:99:0,135,3038	0/0:49,0:49:99:0,120,4675	0/0:49,0:49:99:0,135,4970	0/0:19,0:19:54.17:0,54,2026	0/0:48,0:48:99:0,132,4620	0/0:54,0:54:99:0,147,5408	0/0:38,0:38:99:0,102,4149	1/1:8,38:46:72.24:1859,72,0	0/1:6,46:52:30.08:2321,0,30	1/1:6,20:27:18.06:434,18,0	1/1:8,20:28:4.63:160,5,0	0/0:21,0:20:51.16:0,51,1772	0/0:36,0:36:99:0,108,3948	0/0:68,0:68:99:0,172,6142	0/0:33,0:33:90.31:0,90,3337	0/0:40,0:40:99:0,111,4393	0/0:38,0:38:86.01:0,86,3324	0/0:28,0:28:69.22:0,69,2415	0/0:41,0:41:37.14:0,37,4038	0/0:25,0:25:63.22:0,63,2340	0/0:19,0:19:51.15:0,51,1863
chr10	51679110	.	A	AACACAC	695.94	PASS	AB=0.960;AC=16;AF=0.308;AN=52;BaseQRankSum=0.746;DP=755;FS=1.516;HRun=0;HaplotypeScore=180.1319;InbreedingCoeff=0.4127;MQ=58.57;MQ0=7;MQRankSum=-1.475;QD=2.65;ReadPosRankSum=-3.814;VQSLOD=1.7041;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:31,0:37:22.97:313,23,0	1/1:9,3:13:3.25:85,3,0	./.	./.	0/0:26,0:30:34.05:0,34,538	0/0:23,0:25:23.79:0,24,396	0/0:27,0:27:20.74:0,21,371	0/1:32,0:31:0:0,0,0	0/0:32,0:33:4.44:0,4,556	0/0:25,0:25:12.04:0,12,193	0/0:9,0:10:2.80:0,3,60	0/0:21,0:27:14.11:0,14,259	0/0:40,0:40:17.22:0,17,504	0/0:30,0:31:25.04:0,25,379	1/1:14,14:30:3.01:37,3,0	1/1:15,9:32:13.37:303,13,0	0/1:20,0:29:6.22:6,0,350	0/1:17,0:20:48.42:48,0,132	1/1:13,0:11:1.69:40,2,0	0/1:10,0:16:8.25:8,0,179	0/0:45,0:60:23.83:0,24,273	0/1:26,0:26:1:1,0,318	0/0:17,0:18:9.88:0,10,143	0/0:37,0:38:46.80:0,47,615	0/0:26,0:26:25.73:0,26,435	0/0:22,0:25:19.45:0,19,308	0/1:13,0:12:1.88:2,0,177	0/0:7,0:9:13.86:0,14,209
chr10	51682001	.	G	GA	4622.04	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-11.718;DP=733;FS=3.864;HRun=4;HaplotypeScore=67.9324;InbreedingCoeff=0.9979;MQ=76.50;MQ0=0;MQRankSum=-0.486;QD=34.75;ReadPosRankSum=3.189;VQSLOD=5.5170;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:72.17:0,72,795	0/0:14,0:14:39.10:0,39,432	0/0:20,0:20:48.08:0,48,512	0/0:13,0:13:30.66:0,31,399	0/0:38,0:38:99:0,111,1209	0/0:19,0:19:57.16:0,57,646	0/0:28,0:28:72.19:0,72,805	0/0:44,0:43:99:0,108,1197	0/0:29,0:29:81.23:0,81,918	0/0:45,0:45:99:0,129,1444	0/0:34,0:34:90.25:0,90,1012	1/1:1,22:23:60.20:818,60,0	1/1:3,32:35:84.28:1139,84,0	0/0:21,0:21:60.09:0,60,631	0/0:32,0:32:87.20:0,87,958	0/0:23,0:23:69.18:0,69,770	0/0:24,0:24:63.14:0,63,691	0/0:18,0:18:54.15:0,54,612	0/0:15,0:15:33.08:0,33,363	0/0:28,0:28:72.18:0,72,807	0/0:23,0:23:63.16:0,63,705	1/1:1,20:21:57.19:779,57,0	1/1:1,23:24:63.06:861,63,0	1/1:2,28:30:75.25:1025,75,0	0/0:36,0:36:99:0,99,1103	0/0:22,0:22:66.16:0,66,719	0/0:44,0:43:99:0,123,1394	0/0:6,0:6:18.05:0,18,204
chr10	51683528	.	G	GA	3459.74	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=3.397;DP=769;FS=10.256;HRun=9;HaplotypeScore=84.0728;InbreedingCoeff=0.9908;MQ=77.95;MQ0=0;MQRankSum=-2.063;QD=24.71;ReadPosRankSum=0.363;VQSLOD=3.7303;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:83.91:0,84,718	0/0:13,0:13:35.98:0,36,309	0/0:17,0:17:28.78:0,29,219	0/0:19,0:19:17.59:0,18,287	0/0:32,0:32:74.98:0,75,651	0/0:19,0:19:47.98:0,48,416	0/0:21,0:21:53.95:0,54,463	0/0:40,0:40:98.93:0,99,857	0/0:21,0:21:53.98:0,54,468	0/0:44,0:44:99:0,111,964	0/0:29,0:29:83.94:0,84,722	1/1:7,14:22:12.88:353,13,0	1/1:2,26:28:72.19:797,72,0	0/0:33,0:33:83.94:0,84,724	0/0:34,0:33:89.94:0,90,777	0/0:21,0:21:50.97:0,51,443	0/0:27,0:27:65.97:0,66,573	0/0:30,0:30:89.98:0,90,781	0/0:27,0:27:53.93:0,54,461	0/0:46,0:46:99:0,129,1112	0/0:19,0:19:50.99:0,51,443	1/1:4,19:24:42.95:677,43,0	1/1:4,21:25:60.16:664,60,0	1/1:4,37:41:67.20:969,67,0	0/0:17,0:17:47.99:0,48,417	0/0:44,0:44:99:0,123,1068	0/0:35,0:34:95.98:0,96,833	0/0:10,0:10:21:0,21,182
chr10	51685674	.	AC	A	15802.59	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=16.849;DP=1160;FS=1.237;HRun=2;HaplotypeScore=132.7339;InbreedingCoeff=0.9996;MQ=63.32;MQ0=7;MQRankSum=-1.825;QD=34.43;ReadPosRankSum=7.893;VQSLOD=3.5620;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,53:53:99:1785,139,0	1/1:0,14:14:42.14:545,42,0	0/0:48,0:32:78.82:0,79,1027	0/0:52,0:45:99:0,99,1486	0/0:33,0:33:95.95:0,96,1333	0/0:31,0:31:84.28:0,84,1248	0/0:48,0:48:99:0,139,1957	0/0:56,0:56:99:0,163,2265	0/0:39,0:39:99:0,108,1569	0/0:38,0:38:99:0,107,1525	0/0:28,0:28:73.79:0,74,1035	1/1:0,51:51:99:1751,135,0	1/1:0,31:31:90.29:1162,90,0	0/0:65,0:65:99:0,186,2618	1/1:2,79:80:99:2887,225,0	1/1:3,58:61:99:2155,148,0	1/1:2,31:32:78.22:993,78,0	1/1:3,26:28:68.79:874,69,0	0/0:29,0:28:84.24:0,84,1148	0/0:29,0:29:81.27:0,81,1198	0/0:77,0:77:99:0,210,2982	1/1:1,31:31:83.86:1061,84,0	1/1:1,28:29:87.28:1118,87,0	1/1:1,42:41:99:1473,114,0	0/0:39,0:39:99:0,111,1617	0/0:38,0:38:99:0,108,1475	0/0:39,0:39:99:0,114,1625	0/0:11,0:11:23.32:0,23,393
chr10	51685776	.	TCA	T	9667.48	PASS	AB=0.907;AC=25;AF=0.446;AN=56;BaseQRankSum=15.813;DP=1024;FS=17.313;HRun=0;HaplotypeScore=159.6116;InbreedingCoeff=0.7465;MQ=62.93;MQ0=11;MQRankSum=2.318;QD=18.10;ReadPosRankSum=4.791;VQSLOD=3.7467;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:24,29:55:99:1178,102,0	1/1:4,11:15:24.07:282,24,0	0/0:39,0:27:18.05:0,18,260	0/0:52,0:31:29.85:0,30,324	0/0:23,2:25:12.82:0,13,662	0/0:21,1:22:54.15:0,54,826	0/0:38,1:40:22.63:0,23,1259	0/0:38,0:38:53.89:0,54,660	0/1:27,4:31:72.28:72,0,787	0/1:23,3:25:28.48:28,0,521	0/0:15,1:16:36.11:0,36,541	1/1:16,30:46:84.09:989,84,0	1/1:7,20:28:60.01:684,60,0	0/0:44,0:44:99:0,105,1648	1/1:15,30:42:72.21:848,72,0	1/1:25,30:54:60.85:1159,61,0	1/1:13,22:36:69.48:940,69,0	1/1:14,25:40:74.84:839,75,0	0/1:29,2:31:23.99:24,0,573	0/0:30,3:33:1.63:0,2,971	0/0:63,1:63:67.60:0,68,1960	1/1:11,25:37:68.99:769,69,0	1/1:9,14:23:39.12:459,39,0	1/1:23,38:62:86.78:1396,87,0	0/0:29,1:30:25.38:0,25,970	0/0:37,1:38:57.97:0,58,1336	0/0:31,1:33:13.72:0,14,843	0/0:16,0:16:43.08:0,43,706
chr10	51689061	.	TAC	T	248.82	PASS	AB=0.944;AC=8;AF=0.143;AN=56;BaseQRankSum=0.729;DP=432;FS=0.961;HRun=0;HaplotypeScore=64.1697;InbreedingCoeff=0.6279;MQ=65.32;MQ0=10;MQRankSum=0.929;QD=4.98;ReadPosRankSum=2.423;VQSLOD=2.3727;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,1:26:16.91:0,17,640	1/1:5,0:5:9.02:102,9,0	0/0:37,0:14:22.35:0,22,276	0/0:38,0:16:20.63:0,21,161	0/0:18,0:18:35.91:0,36,524	0/0:15,0:15:27.09:0,27,417	0/0:10,1:11:21.05:0,21,303	0/0:24,0:24:57.13:0,57,729	0/1:16,0:16:1.07:1,0,476	0/0:10,0:10:27.08:0,27,390	0/0:15,0:15:33.09:0,33,492	0/0:7,0:7:11.93:0,12,140	0/0:6,0:6:2.88:0,3,15	0/1:7,1:8:16.24:16,0,162	1/1:10,1:11:14.55:119,15,0	1/1:10,0:10:12.04:147,12,0	0/0:17,0:18:14.92:0,15,124	0/0:23,0:22:30.24:0,30,222	0/0:6,0:6:12.04:0,12,173	0/0:15,0:15:36.11:0,36,544	0/0:8,0:7:9.98:0,10,199	0/0:5,0:5:8.62:0,9,91	0/0:14,0:14:17.53:0,18,177	0/0:15,0:15:17.29:0,17,118	0/0:18,0:18:38.36:0,38,489	0/0:25,1:26:10.42:0,10,573	0/0:19,0:18:42.13:0,42,645	0/0:7,0:7:18.06:0,18,275
chr10	51689080	.	GCA	G	267.40	PASS	AB=0.933;AC=15;AF=0.268;AN=56;BaseQRankSum=1.989;DP=462;FS=2.005;HRun=0;HaplotypeScore=68.8600;InbreedingCoeff=0.3913;MQ=51.71;MQ0=20;MQRankSum=3.117;QD=2.50;ReadPosRankSum=1.793;VQSLOD=1.7323;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:19.73:0,20,239	0/0:5,0:5:2.84:0,3,9	0/0:62,0:12:5.90:0,6,30	0/0:53,0:6:5.94:0,6,42	0/1:14,2:16:11.71:12,0,232	0/0:12,0:12:22.26:0,22,238	0/0:12,0:12:20.95:0,21,231	0/0:22,0:21:36:0,36,379	0/0:15,0:15:33.54:0,34,372	0/0:12,0:11:14.95:0,15,157	0/0:13,0:13:12.48:0,12,143	1/1:10,0:10:3:28,3,0	1/1:4,0:4:6.01:55,6,0	0/1:6,0:6:10.24:10,0,100	0/0:11,0:11:8.99:0,9,74	0/1:12,0:12:0:0,0,0	0/0:22,0:22:29.90:0,30,250	0/0:24,0:23:46.93:0,47,347	0/0:6,0:5:6.02:0,6,89	0/0:14,0:14:24:0,24,256	0/1:7,1:7:17.94:18,0,152	1/1:6,0:6:2.97:20,3,0	1/1:12,0:12:8.85:85,9,0	1/1:17,0:17:14.84:148,15,0	0/1:14,2:16:47.92:48,0,289	0/0:18,0:18:1.56:0,2,299	0/0:17,0:16:41.84:0,42,457	0/0:7,0:7:8.93:0,9,88
chr10	51689099	.	CACA	C	418.37	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=3.317;DP=482;FS=12.034;HRun=0;HaplotypeScore=75.3616;InbreedingCoeff=0.6652;MQ=49.52;MQ0=28;MQRankSum=0.224;QD=4.92;ReadPosRankSum=2.277;VQSLOD=0.6501;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:26:12.72:13,0,272	0/0:6,0:6:4.09:0,4,12	0/0:57,0:12:23.85:0,24,229	0/0:54,0:8:4.32:0,4,139	0/0:18,0:18:32.62:0,33,477	0/0:9,0:9:24:0,24,369	0/0:13,0:12:30.92:0,31,437	0/0:23,0:22:54.39:0,54,648	0/0:16,0:16:37.53:0,38,514	0/0:11,0:9:24.02:0,24,306	0/0:13,0:13:28.38:0,28,325	1/1:1,7:7:3.01:52,3,0	1/1:8,0:7:8.64:124,9,0	0/0:7,0:7:13.56:0,14,212	0/0:13,0:13:12.34:0,12,80	0/0:13,0:13:3.79:0,4,11	0/0:22,0:20:20.87:0,21,315	0/0:25,0:22:9.31:0,9,363	0/0:12,0:10:29.81:0,30,344	0/0:15,0:14:14.73:0,15,423	0/0:10,0:9:20.61:0,21,332	1/1:1,4:5:2.91:20,3,0	1/1:1,10:11:9.22:155,9,0	1/1:3,17:19:14.65:206,15,0	0/0:20,0:19:22.18:0,22,536	0/0:18,0:17:39.22:0,39,474	0/0:16,0:15:44.98:0,45,659	0/0:6,0:5:12.01:0,12,144
chr10	51689102	.	A	AC	794.10	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=7.677;DP=505;FS=1.275;HRun=1;HaplotypeScore=76.5347;InbreedingCoeff=0.6377;MQ=52.27;MQ0=26;MQRankSum=-4.283;QD=6.62;ReadPosRankSum=5.086;VQSLOD=0.9373;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:26:13.44:13,0,188	1/1:3,0:3:0.88:2,1,0	0/0:54,0:12:26.06:0,26,213	0/0:50,0:9:3.55:0,4,123	0/0:22,0:22:34.08:0,34,477	0/0:10,0:10:24:0,24,276	0/0:16,0:15:36.68:0,37,375	0/0:25,0:24:53.65:0,54,558	0/0:17,0:17:24.85:0,25,433	0/0:15,0:13:3.84:0,4,244	0/0:14,0:14:24.91:0,25,261	1/1:8,1:8:0.87:2,1,0	1/1:9,0:8:3.97:26,4,0	0/0:12,0:12:33.01:0,33,320	1/1:10,1:11:14.73:110,15,0	0/0:12,0:12:3.79:0,4,11	1/1:7,15:20:24.57:309,25,0	1/1:9,13:20:49.62:482,50,0	0/0:14,0:12:35.74:0,36,358	0/0:16,0:15:17.74:0,18,346	0/0:12,0:11:32.94:0,33,298	0/0:5,0:5:2.96:0,3,19	1/1:11,0:11:2.12:6,2,0	0/0:21,0:20:4.82:0,5,51	0/0:25,0:24:45.39:0,45,561	0/0:19,0:18:47.34:0,47,426	0/0:19,0:19:25.43:0,25,362	0/0:7,0:6:14.77:0,15,140
chr10	51689271	.	GC	G	3219.26	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=10.041;DP=623;FS=1.974;HRun=1;HaplotypeScore=65.0787;InbreedingCoeff=0.9980;MQ=87.71;MQ0=0;MQRankSum=-1.482;QD=35.77;ReadPosRankSum=1.903;VQSLOD=4.0342;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:49:99:0,133,2197	0/0:12,0:12:36.12:0,36,573	0/0:22,0:23:63.68:0,64,983	0/0:26,1:26:64.25:0,64,1004	0/0:13,0:13:36.11:0,36,551	0/0:22,0:22:63.21:0,63,1006	0/0:25,0:25:75.20:0,75,1124	0/0:36,0:36:99:0,108,1684	0/0:26,0:26:78.25:0,78,1224	0/0:12,0:12:33.11:0,33,528	0/0:13,0:13:39.12:0,39,597	1/1:0,16:16:42.14:587,42,0	1/1:0,24:24:66.22:919,66,0	0/0:31,0:31:90.13:0,90,1415	0/0:27,0:27:78.24:0,78,1199	0/0:28,0:28:84.27:0,84,1315	0/0:24,0:24:72.22:0,72,1123	0/0:21,0:21:60.20:0,60,946	0/0:25,0:25:72.25:0,72,1148	0/0:21,0:21:63.20:0,63,984	0/0:38,0:38:99:0,111,1751	1/1:0,15:15:45.15:629,45,0	1/1:0,7:7:18.06:252,18,0	1/1:0,28:28:72.24:1007,72,0	0/0:16,0:16:48.16:0,48,767	0/0:14,0:14:42.14:0,42,672	0/0:17,0:17:51.16:0,51,790	0/0:13,0:13:39.13:0,39,624
chr10	51690411	.	C	CA	2315.74	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=0.830;DP=681;FS=6.968;HRun=10;HaplotypeScore=83.5844;InbreedingCoeff=0.8530;MQ=76.15;MQ0=2;MQRankSum=-0.276;QD=16.42;ReadPosRankSum=0.368;VQSLOD=3.8960;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:83.86:0,84,689	0/0:8,0:8:17.97:0,18,148	0/1:19,0:19:10.69:11,0,93	0/0:18,0:17:12.14:0,12,94	0/0:33,0:35:93.95:0,94,746	0/0:25,0:25:62.91:0,63,517	0/0:20,0:20:47.89:0,48,391	0/0:38,0:39:79.90:0,80,645	0/0:22,0:22:59.72:0,60,480	0/0:27,0:27:68.91:0,69,566	0/0:16,0:16:41.93:0,42,344	1/1:6,27:33:16.88:591,17,0	1/1:3,21:25:25.49:495,25,0	0/0:25,0:25:56.91:0,57,468	0/0:26,0:29:63.87:0,64,496	0/0:26,0:26:68.89:0,69,566	0/0:23,1:25:4.27:0,4,435	0/0:19,0:20:46.89:0,47,366	0/0:19,0:19:53.82:0,54,433	0/0:31,0:32:76.83:0,77,614	0/0:22,2:23:18.91:0,19,355	1/1:3,12:17:41.81:413,42,0	1/1:4,21:25:57.01:591,57,0	1/1:4,18:22:17.46:391,17,0	0/0:25,0:25:65.88:0,66,538	0/0:25,0:25:56.92:0,57,466	0/0:28,0:31:80.99:0,81,630	0/0:15,0:15:38.74:0,39,320
chr10	51691140	.	A	AT	989.24	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-8.478;DP=690;FS=6.024;HRun=9;HaplotypeScore=74.5361;InbreedingCoeff=0.9759;MQ=68.60;MQ0=0;MQRankSum=-0.677;QD=19.78;ReadPosRankSum=0.197;VQSLOD=3.9550;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:10,40:50:97.20:1084,97,0	0/0:16,0:17:47.02:0,47,397	0/0:15,0:16:20.46:0,20,161	0/0:8,0:8:17.55:0,18,150	0/0:26,0:27:71.97:0,72,625	0/0:22,0:22:62.99:0,63,547	0/0:16,0:16:32.94:0,33,277	0/0:31,2:33:22.15:0,22,565	0/0:20,0:20:56.99:0,57,495	0/0:30,0:30:71.97:0,72,623	0/0:20,1:21:29.81:0,30,488	0/0:18,0:18:41.96:0,42,365	0/0:24,0:24:56.97:0,57,494	0/0:23,0:23:65.98:0,66,573	0/0:29,0:29:65.96:0,66,573	0/0:24,0:25:71.02:0,71,605	0/0:22,0:22:59.98:0,60,521	0/0:21,0:20:50.98:0,51,443	0/0:15,0:15:35.98:0,36,313	0/0:45,0:45:99:0,123,1068	0/0:23,1:24:29.81:0,30,487	0/0:22,1:23:20.80:0,21,409	0/0:36,0:36:99:0,102,881	0/0:18,0:18:44.98:0,45,391	0/0:30,1:31:47.78:0,48,644	0/0:38,0:39:99:0,101,865	0/0:29,0:28:83.98:0,84,729	0/0:8,0:8:24:0,24,208
chr10	51695268	.	GGA	G	1038.25	PASS	AB=0.853;AC=7;AF=0.125;AN=56;BaseQRankSum=8.955;DP=371;FS=9.569;HRun=0;HaplotypeScore=70.3354;InbreedingCoeff=0.5016;MQ=77.52;MQ0=0;MQRankSum=-3.424;QD=13.14;ReadPosRankSum=4.653;VQSLOD=2.3681;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:26.31:0,26,245	1/1:4,3:7:13.54:113,14,0	0/0:24,0:22:52.93:0,53,629	0/0:13,0:12:34.32:0,34,528	0/0:9,0:9:26.89:0,27,327	0/0:16,0:16:44.56:0,45,500	0/0:9,0:9:27.08:0,27,430	0/0:19,0:19:42.18:0,42,477	0/0:16,0:16:47.98:0,48,734	0/0:8,0:8:20.84:0,21,218	0/0:12,0:12:25.92:0,26,316	0/0:7,0:7:17.69:0,18,171	0/0:17,0:17:46.18:0,46,338	0/0:17,0:17:51.08:0,51,770	1/1:3,18:21:45:596,45,0	0/1:3,11:14:24.30:287,0,24	0/1:21,0:21:35.51:111,0,36	0/1:16,0:16:8.73:72,0,9	0/0:11,0:11:29.99:0,30,465	0/0:11,0:11:32.86:0,33,444	0/0:6,0:6:12.01:0,12,132	0/0:9,0:9:10.24:0,10,148	0/0:9,0:9:23.35:0,23,159	0/0:9,0:9:20.72:0,21,190	0/0:12,0:12:24.69:0,25,403	0/0:7,0:7:12.04:0,12,218	0/0:21,0:21:41.37:0,41,851	0/0:17,0:17:48.08:0,48,706
chr10	51695814	.	ACGCGCGCG	A	683.84	PASS	AB=0.967;AC=8;AF=0.143;AN=56;BaseQRankSum=5.330;DP=472;FS=15.119;HRun=0;HaplotypeScore=119.7606;InbreedingCoeff=0.1853;MQ=59.93;MQ0=10;MQRankSum=-2.759;QD=6.45;ReadPosRankSum=-2.408;VQSLOD=1.1648;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,1:28:60.19:0,60,837	0/1:6,0:6:12.81:13,0,115	1/1:5,5:7:20.75:413,21,0	0/1:12,4:13:42.38:362,0,42	0/0:11,0:11:33.06:0,33,819	0/0:21,0:21:51.18:0,51,1633	0/0:21,0:20:41.24:0,41,1310	0/0:19,0:18:45.14:0,45,1015	0/0:15,0:13:39.12:0,39,1091	0/0:21,0:20:40.20:0,40,1480	0/0:16,0:15:45.11:0,45,1305	0/0:21,0:21:41.81:0,42,690	0/0:19,0:18:45.11:0,45,825	0/0:17,0:17:44.99:0,45,1267	0/1:15,0:15:12.16:12,0,113	0/1:14,0:14:6.02:6,0,91	0/1:29,0:27:2.08:2,0,87	0/1:16,0:16:1.53:2,0,366	0/0:15,0:15:18.07:0,18,1107	0/0:8,0:8:21.06:0,21,507	0/0:33,0:28:69.12:0,69,2132	0/0:9,0:8:21.07:0,21,415	0/0:10,0:10:23.11:0,23,424	0/0:34,0:32:70.30:0,70,1487	0/0:13,0:12:33.11:0,33,1067	0/0:15,0:15:45.14:0,45,1100	0/0:11,0:11:26.12:0,26,739	0/0:9,0:9:24.97:0,25,680
chr10	51695820	.	GCGCACACACACACACA	G	1650.83	PASS	AB=0.937;AC=18;AF=0.321;AN=56;BaseQRankSum=-0.118;DP=448;FS=7.703;HRun=0;HaplotypeScore=160.2717;InbreedingCoeff=0.1274;MQ=55.42;MQ0=12;MQRankSum=-1.553;QD=7.50;ReadPosRankSum=-0.247;VQSLOD=2.0412;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:28:99:226,0,214	1/1:5,0:6:14.92:213,15,0	1/1:7,0:4:11.44:60,11,0	0/1:15,0:12:11.16:61,0,11	0/0:9,0:8:24.04:0,24,748	0/0:20,0:20:44.87:0,45,1555	0/0:22,0:20:41.25:0,41,1221	0/0:13,0:12:6.02:0,6,258	0/0:15,0:13:32.93:0,33,914	0/0:21,0:20:56.79:0,57,1769	0/0:16,0:15:38.25:0,38,1205	0/1:22,0:22:99:124,0,536	0/1:16,0:15:62.36:62,0,1199	0/0:16,0:16:14.57:0,15,1141	1/1:0,10:10:3.01:142,3,0	1/1:0,13:13:3.01:142,3,0	0/1:4,24:26:36.34:133,0,36	0/1:12,3:15:4.58:413,0,5	0/0:15,0:15:39.57:0,40,1170	0/1:8,0:8:6.90:7,0,396	0/0:34,0:29:59.93:0,60,2762	0/1:9,0:8:81.39:81,0,339	0/1:8,0:8:80.42:80,0,383	0/1:32,0:33:76.27:76,0,2336	0/0:14,0:13:29.97:0,30,1344	0/0:11,0:11:25.83:0,26,642	0/0:12,0:12:29.91:0,30,1015	0/0:10,0:10:12.69:0,13,466
chr10	51695822	.	GCA	G	238.71	PASS	AB=0.958;AC=20;AF=0.400;AN=50;BaseQRankSum=0.967;DP=460;FS=10.518;HRun=0;HaplotypeScore=74.1444;InbreedingCoeff=-0.2937;MQ=54.19;MQ0=13;MQRankSum=1.011;QD=0.84;ReadPosRankSum=0.710;VQSLOD=0.6619;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	0/1:7,0:7:8.15:8,0,13	./.	./.	0/1:11,0:9:17.76:27,0,18	0/1:18,3:21:20.02:20,0,90	0/1:23,0:22:22.90:23,0,60	0/0:15,0:14:4.52:0,5,23	0/0:15,0:13:3.01:0,3,41	0/1:22,1:23:32.51:33,0,37	0/1:14,2:15:13.19:86,0,13	0/0:15,0:22:5.87:0,6,70	0/0:14,0:13:12.03:0,12,154	0/1:15,2:17:19.78:20,0,76	1/1:10,0:10:2.84:14,3,0	1/1:13,0:13:2.84:14,3,0	1/1:28,0:26:2.80:13,3,0	0/1:16,0:16:5.13:7,0,5	0/1:14,0:15:28.39:28,0,67	0/0:8,0:8:3.01:0,3,41	0/1:34,0:29:5.25:5,0,200	0/0:9,0:8:3.46:0,3,25	0/0:8,0:8:6.02:0,6,79	0/0:36,0:34:21.49:0,21,228	0/1:12,1:12:23.05:23,0,78	0/1:11,0:11:20.90:26,0,21	0/1:12,0:12:5:5,0,11	0/1:11,0:11:17.94:26,0,18
chr10	51697022	.	ATGTG	A	772.18	PASS	AB=0.975;AC=11;AF=0.220;AN=50;BaseQRankSum=1.670;DP=599;FS=6.354;HRun=0;HaplotypeScore=120.1005;InbreedingCoeff=0.3093;MQ=66.71;MQ0=6;MQRankSum=0.362;QD=4.54;ReadPosRankSum=-0.732;VQSLOD=1.9840;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:29:7.78:59,8,0	0/1:13,0:13:49.71:50,0,52	./.	./.	0/0:24,0:24:29.73:0,30,433	0/1:17,0:18:34.78:35,0,93	0/0:23,0:25:33.30:0,33,597	0/0:28,0:27:14.74:0,15,157	0/0:7,0:7:17.53:0,18,278	0/0:27,0:29:38.51:0,39,500	0/0:17,0:17:29.80:0,30,529	0/0:21,0:22:38.99:0,39,709	0/1:18,0:18:21.26:21,0,360	0/0:17,0:18:23.80:0,24,388	0/1:22,0:21:25.63:26,0,204	0/0:13,0:13:20.91:0,21,162	1/1:10,15:26:33.09:459,33,0	1/1:20,9:30:0.64:240,1,0	0/1:12,0:13:30.92:31,0,90	0/0:26,0:27:14.10:0,14,527	0/0:34,0:34:51.07:0,51,792	0/0:22,0:22:39.13:0,39,720	0/0:19,0:19:32.94:0,33,545	0/0:28,0:30:60.53:0,61,1094	0/0:15,0:17:14.77:0,15,250	0/0:31,0:31:20.37:0,20,375	0/0:15,0:16:29.78:0,30,527	./.
chr10	51697064	.	GTC	G	1119.72	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=4.469;DP=649;FS=19.357;HRun=0;HaplotypeScore=103.3240;InbreedingCoeff=0.7973;MQ=63.62;MQ0=12;MQRankSum=-0.043;QD=16.23;ReadPosRankSum=-0.476;VQSLOD=2.1608;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:50.57:0,51,382	1/1:2,13:15:15.02:186,15,0	0/0:32,0:17:7.82:0,8,203	0/0:41,0:19:15.64:0,16,191	0/0:19,1:20:34.85:0,35,445	0/0:14,0:14:28.47:0,28,292	0/0:34,0:34:66.72:0,67,848	0/0:26,0:26:52.40:0,52,527	0/1:15,0:15:1.45:1,0,288	0/0:24,0:24:38.32:0,38,618	0/0:22,0:22:48.80:0,49,636	0/0:19,0:18:45.08:0,45,722	0/0:18,0:18:50.58:0,51,601	0/0:20,0:20:42.81:0,43,522	1/1:17,6:23:37.73:550,38,0	1/1:9,7:16:45.04:523,45,0	0/0:32,0:31:60.64:0,61,390	0/0:28,0:27:47.72:0,48,301	0/0:17,1:17:11.79:0,12,337	0/0:25,0:25:8.55:0,9,531	0/0:41,0:40:42.41:0,42,856	0/0:24,0:24:66.08:0,66,892	0/0:21,0:21:43.39:0,43,678	0/0:39,0:39:69.22:0,69,1285	0/0:10,0:10:12.67:0,13,242	0/0:20,0:20:12.64:0,13,447	0/0:21,0:21:40.06:0,40,617	0/0:3,0:3:5.96:0,6,44
chr10	51697738	.	ATTAAGAGCACTTAATACTC	A	9916.90	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=12.488;DP=623;FS=4.698;HRun=0;HaplotypeScore=306.3166;InbreedingCoeff=0.9960;MQ=70.65;MQ0=0;MQRankSum=-12.655;QD=112.69;ReadPosRankSum=3.864;VQSLOD=4.1101;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:81.28:0,81,6925	0/0:14,0:14:42.14:0,42,3803	0/0:22,0:22:63.22:0,63,4100	0/0:16,0:16:48.16:0,48,3231	0/0:38,0:38:99:0,114,8727	0/0:21,0:21:63.22:0,63,5432	0/0:25,0:25:72.25:0,72,6175	0/0:34,0:34:96.31:0,96,7518	0/0:23,0:23:66.23:0,66,5927	0/0:24,0:24:66.22:0,66,5324	0/0:23,0:23:66.23:0,66,5499	1/1:2,17:19:36.12:1955,36,0	1/1:4,26:30:69.24:3747,69,0	0/0:25,0:25:72.25:0,72,6446	0/0:22,0:22:66.23:0,66,5775	0/0:19,0:19:57.20:0,57,5179	0/0:31,0:31:93.32:0,93,8228	0/0:21,0:21:57.18:0,57,4932	0/0:13,0:13:33.11:0,33,1934	0/0:24,0:24:69.24:0,69,6060	0/0:23,0:23:63.22:0,63,5430	1/1:1,11:12:33.11:1792,33,0	1/1:3,11:14:30.10:1620,30,0	1/1:3,10:13:15.05:802,15,0	0/0:22,0:22:65.95:0,66,5360	0/0:26,0:26:75.26:0,75,6325	0/0:26,0:26:72.23:0,72,5792	0/0:16,0:16:45.15:0,45,3823
chr10	51701325	.	TCAAAA	T	4672.98	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=12.675;DP=794;FS=7.056;HRun=0;HaplotypeScore=150.1698;InbreedingCoeff=0.9985;MQ=71.85;MQ0=5;MQRankSum=-1.324;QD=35.67;ReadPosRankSum=2.936;VQSLOD=4.3690;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:75.26:0,75,2085	0/0:10,0:10:27.09:0,27,777	0/0:48,0:35:43.37:0,43,1210	0/0:64,0:40:46.36:0,46,1025	0/0:32,0:32:75.26:0,75,2123	0/0:19,0:19:45.15:0,45,1288	0/0:25,0:25:57.18:0,57,1504	0/0:34,0:34:70.48:0,70,1923	0/0:19,0:19:48.16:0,48,1349	0/0:40,0:40:90.31:0,90,2585	0/0:23,0:23:51.18:0,51,1462	1/1:4,18:22:48.16:901,48,0	1/1:11,23:34:63.22:1182,63,0	0/0:20,0:20:54.19:0,54,1553	0/0:41,0:41:90.31:0,90,2519	0/0:22,0:22:54.19:0,54,1549	0/0:46,0:46:99:0,111,3131	0/0:29,0:29:75.26:0,75,2147	0/0:15,0:15:39.13:0,39,1086	0/0:27,0:27:60.21:0,60,1651	0/0:13,0:13:21.07:0,21,604	1/1:5,12:17:30.10:563,30,0	1/1:8,16:24:36.12:675,36,0	1/1:8,26:34:72.25:1351,72,0	0/0:32,0:32:75.26:0,75,2106	0/0:31,0:31:87.30:0,87,2478	0/0:28,0:28:69.24:0,69,1953	0/0:11,0:11:30.10:0,30,782
chr10	51703003	.	CGGT	C	1542.02	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.409;DP=668;FS=3.293;HRun=0;HaplotypeScore=91.9125;InbreedingCoeff=0.9955;MQ=92.07;MQ0=0;MQRankSum=-5.041;QD=38.55;ReadPosRankSum=3.860;VQSLOD=4.2894;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,38:40:96.33:1637,96,0	0/0:7,0:7:21.07:0,21,484	0/0:27,0:27:81.25:0,81,1769	0/0:28,0:28:81.04:0,81,1827	0/0:29,0:29:78.24:0,78,1710	0/0:21,0:21:63.22:0,63,1452	0/0:27,0:27:81.26:0,81,1775	0/0:33,0:33:81.27:0,81,1827	0/0:19,0:19:57.20:0,57,1312	0/0:22,0:22:66.23:0,66,1483	0/0:19,0:19:57.20:0,57,1291	0/0:24,0:24:69.24:0,69,1562	0/0:20,0:20:57.20:0,57,1290	0/0:23,0:23:63.22:0,63,1429	0/0:19,0:19:54.19:0,54,1245	0/0:25,0:25:75.26:0,75,1730	0/0:31,0:31:84.26:0,84,1862	0/0:22,0:22:63.22:0,63,1453	0/0:24,0:24:66.23:0,66,1519	0/0:20,0:20:54.19:0,54,1245	0/0:29,0:29:87.30:0,87,1983	0/0:22,0:22:63.20:0,63,1406	0/0:17,0:17:51.17:0,51,1151	0/0:28,0:28:81.28:0,81,1867	0/0:21,0:21:63.22:0,63,1451	0/0:27,0:27:72.25:0,72,1661	0/0:33,0:32:93.32:0,93,2121	0/0:11,0:11:30.10:0,30,692
chr10	51703789	.	AACACAC	A	171.19	PASS	AC=10;AF=0.192;AN=52;BaseQRankSum=2.233;DP=476;FS=4.621;HRun=0;HaplotypeScore=101.6746;InbreedingCoeff=0.6584;MQ=70.45;MQ0=10;MQRankSum=-2.730;QD=2.63;ReadPosRankSum=1.274;VQSLOD=1.0906;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:23:11.96:0,12,105	0/0:9,0:9:6.02:0,6,149	./.	./.	0/0:17,1:19:24.05:0,24,503	0/0:13,0:13:15.05:0,15,431	0/0:17,0:20:12.04:0,12,270	0/0:18,0:17:3.87:0,4,24	0/0:13,0:13:12.03:0,12,300	0/0:11,0:11:18.05:0,18,429	0/0:10,0:10:14.76:0,15,327	1/1:9,2:11:5.98:80,6,0	1/1:11,7:18:5.25:116,5,0	0/0:12,0:13:8.99:0,9,156	0/0:14,0:14:15.05:0,15,363	0/0:18,0:18:9.50:0,10,223	0/0:16,0:23:12.04:0,12,280	0/0:15,0:19:27.07:0,27,655	0/0:16,0:16:6.49:0,6,151	0/0:14,0:16:12.04:0,12,303	0/0:35,0:34:48.14:0,48,1193	1/1:8,2:9:3.48:61,3,0	1/1:8,0:8:3.46:25,3,0	1/1:13,5:18:2.96:20,3,0	0/0:14,0:14:24.07:0,24,631	0/0:18,0:19:20.12:0,20,590	0/0:22,0:24:33.11:0,33,928	0/0:9,0:9:12.04:0,12,303
chr10	51703799	.	C	CACAT	737.14	PASS	AB=0.853;AC=7;AF=0.125;AN=56;BaseQRankSum=4.097;DP=516;FS=10.601;HRun=0;HaplotypeScore=99.4638;InbreedingCoeff=0.4896;MQ=57.99;MQ0=15;MQRankSum=-2.513;QD=9.21;ReadPosRankSum=2.953;VQSLOD=1.9344;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:31:53.85:0,54,440	1/1:1,7:8:6.02:140,6,0	0/0:20,0:11:13.42:0,13,166	0/0:25,0:15:35.98:0,36,339	0/0:25,0:25:45.15:0,45,447	0/0:18,0:18:44.83:0,45,459	0/0:22,0:22:53.81:0,54,510	0/0:23,0:22:63.61:0,64,495	0/0:14,0:13:26.36:0,26,313	0/0:11,0:11:32.97:0,33,282	0/0:10,0:10:20.78:0,21,232	0/0:12,0:11:26.70:0,27,218	0/0:22,0:21:35.61:0,36,290	0/0:13,0:13:26.98:0,27,263	1/1:16,0:16:18.05:370,18,0	0/1:4,13:19:6.43:209,0,6	0/1:17,0:17:99:105,0,144	0/1:20,0:20:46.79:47,0,285	0/0:20,0:18:47.77:0,48,374	0/0:13,0:13:32.97:0,33,342	0/0:42,0:41:89.82:0,90,962	0/0:9,0:8:14.98:0,15,130	0/0:10,0:10:14.89:0,15,111	0/0:19,0:18:20.61:0,21,170	0/0:15,0:15:24.47:0,24,440	0/0:23,0:23:55.91:0,56,583	0/0:26,0:26:65.31:0,65,747	0/0:12,0:12:26.72:0,27,197
chr10	51704405	.	ACTCTCTCTCTCT	A	958.74	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=5.891;DP=561;FS=7.571;HRun=0;HaplotypeScore=178.7641;InbreedingCoeff=0.7157;MQ=63.34;MQ0=10;MQRankSum=-3.996;QD=9.13;ReadPosRankSum=2.366;VQSLOD=1.8646;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:12.04:0,12,480	1/1:8,0:7:0.47:1,0,0	0/0:24,0:16:3.01:0,3,70	0/0:32,0:16:2.13:0,2,5	0/0:18,0:18:9.03:0,9,333	0/0:18,0:19:33.11:0,33,1587	0/0:15,0:15:12.02:0,12,473	0/0:33,0:32:18.78:0,19,518	0/0:14,0:14:21.07:0,21,1132	0/0:17,0:17:24.08:0,24,1144	0/0:18,0:20:15.01:0,15,629	1/1:19,8:27:18.51:440,19,0	1/1:11,1:12:9.03:168,9,0	0/0:11,0:13:21.07:0,21,968	0/0:19,0:19:8.93:0,9,242	0/0:29,0:29:7.09:0,7,322	0/0:16,0:15:18.06:0,18,718	0/0:13,0:12:15.94:0,16,545	0/0:20,0:19:17.42:0,17,672	0/0:18,0:18:3.01:0,3,141	0/0:21,0:19:27.09:0,27,1220	1/1:15,7:23:8.99:207,9,0	1/1:18,0:19:2.99:24,3,0	1/1:10,6:15:12.03:271,12,0	0/0:22,0:22:27.07:0,27,1228	0/0:27,0:26:36.12:0,36,1722	0/0:18,0:19:30.09:0,30,1317	0/0:17,0:15:6.02:0,6,287
chr10	51704407	.	T	TCTCG	65.73	PASS	AB=0.899;AC=4;AF=0.071;AN=56;BaseQRankSum=5.191;DP=585;FS=1.090;HRun=0;HaplotypeScore=129.0284;InbreedingCoeff=-0.0680;MQ=61.59;MQ0=11;MQRankSum=-2.763;QD=0.75;ReadPosRankSum=-0.442;VQSLOD=2.3371;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:10,20:31:17.02:92,0,17	0/0:7,0:6:12.46:0,12,101	0/0:23,0:15:35.94:0,36,337	0/0:32,0:16:21.76:0,22,289	0/0:18,0:18:35.79:0,36,286	0/0:20,0:20:53.90:0,54,582	0/0:14,0:13:30.01:0,30,298	0/0:39,0:37:92.52:0,93,758	0/0:16,0:16:35.32:0,35,422	0/0:20,0:20:49.84:0,50,508	0/0:24,0:23:51.46:0,51,462	0/0:27,0:27:56.77:0,57,486	0/0:11,0:11:23.73:0,24,210	0/0:14,0:14:23.10:0,23,375	0/0:19,0:19:22.01:0,22,268	0/1:28,0:28:15.06:15,0,331	0/1:16,0:15:39.23:39,0,198	0/1:13,0:12:28.17:28,0,122	0/0:24,0:23:56.66:0,57,494	0/0:18,0:18:47.95:0,48,401	0/0:22,0:20:41.97:0,42,399	0/0:22,0:22:41.77:0,42,353	0/0:19,0:19:44.88:0,45,363	0/0:16,0:15:27.34:0,27,229	0/0:24,0:24:50.99:0,51,467	0/0:28,0:27:71.91:0,72,686	0/0:22,0:22:54.81:0,55,607	0/0:18,0:16:35.92:0,36,321
chr10	51705401	.	C	CT	1001.83	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-6.842;DP=574;FS=9.942;HRun=10;HaplotypeScore=68.2782;InbreedingCoeff=0.9659;MQ=68.17;MQ0=0;MQRankSum=-1.907;QD=21.32;ReadPosRankSum=-0.335;VQSLOD=4.0536;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:65.90:0,66,542	0/0:8,0:8:17.97:0,18,148	0/0:9,0:9:14.94:0,15,119	0/0:9,0:8:14.98:0,15,123	0/0:21,0:21:53.90:0,54,440	0/0:25,0:27:72.97:0,73,575	0/0:11,0:11:29.96:0,30,246	0/0:37,1:38:47.04:0,47,584	0/0:25,1:26:42.93:0,43,559	0/0:27,0:28:67.89:0,68,546	0/0:29,0:29:71.88:0,72,591	0/0:16,0:16:47.92:0,48,391	0/0:22,0:22:56.91:0,57,465	0/0:15,0:15:44.94:0,45,366	0/0:15,1:16:28.18:0,28,344	0/0:19,0:18:53.92:0,54,443	1/1:6,24:30:41.52:645,42,0	1/1:1,16:17:26.47:478,26,0	0/0:28,0:29:61.94:0,62,498	0/0:31,0:31:68.87:0,69,566	0/0:6,0:6:17.98:0,18,148	0/0:17,0:19:46:0,46,357	0/0:28,0:28:74.90:0,75,616	0/0:15,0:15:35.93:0,36,292	0/0:8,0:7:14.97:0,15,123	0/0:22,0:22:56.93:0,57,468	0/0:27,0:29:71.99:0,72,556	0/0:18,0:18:29.92:0,30,246
chr10	51705422	.	TC	T	3738.15	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=10.007;DP=580;FS=12.450;HRun=2;HaplotypeScore=59.1020;InbreedingCoeff=0.9971;MQ=67.58;MQ0=0;MQRankSum=-0.659;QD=35.94;ReadPosRankSum=2.062;VQSLOD=3.2853;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:72.24:0,72,1078	0/0:10,0:10:30.10:0,30,448	0/0:9,0:9:23.77:0,24,266	0/0:7,0:6:18.06:0,18,270	0/0:23,0:23:66.22:0,66,988	0/0:31,0:31:93.31:0,93,1388	0/0:15,0:15:45.15:0,45,670	0/0:27,0:27:78.26:0,78,1150	0/0:33,0:33:99:0,99,1464	0/0:28,0:28:84.28:0,84,1240	0/0:30,0:30:90.30:0,90,1348	1/1:0,16:16:48.16:623,48,0	1/1:1,25:26:72.23:935,72,0	0/0:17,0:17:51.16:0,51,741	0/0:18,0:18:54.18:0,54,809	0/0:25,0:24:75.24:0,75,1100	0/0:25,0:25:69.21:0,69,997	0/0:19,0:19:54.18:0,54,807	0/0:27,0:27:81.24:0,81,1173	0/0:23,0:23:69.22:0,69,1012	0/0:9,0:9:27.08:0,27,382	1/1:0,20:20:54.18:700,54,0	1/1:0,28:28:78.25:1013,78,0	1/1:0,14:14:36.12:467,36,0	0/0:10,0:10:30.06:0,30,425	0/0:20,0:20:60.19:0,60,878	0/0:29,0:28:84.27:0,84,1235	0/0:17,0:17:51.17:0,51,764
chr10	51705520	.	T	TAC	3990.85	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-8.402;DP=672;FS=14.777;HRun=0;HaplotypeScore=79.4459;InbreedingCoeff=0.9979;MQ=65.42;MQ0=1;MQRankSum=0.029;QD=38.01;ReadPosRankSum=1.713;VQSLOD=4.8115;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:61.34:0,61,749	0/0:12,0:12:30.10:0,30,378	0/0:18,0:18:43.75:0,44,555	0/0:10,0:8:18.03:0,18,210	0/0:23,0:23:63.20:0,63,794	0/0:33,0:33:90.25:0,90,1093	0/0:18,0:18:48.13:0,48,578	0/0:36,0:36:78.18:0,78,882	0/0:27,0:27:75.21:0,75,918	0/0:37,0:37:99:0,102,1245	0/0:35,0:35:93.26:0,93,1131	1/1:1,16:17:33.11:548,33,0	1/1:4,14:17:45.14:721,45,0	0/0:22,0:22:57.16:0,57,693	0/0:20,0:20:54.17:0,54,681	0/0:29,0:29:84.25:0,84,1034	0/0:23,0:23:60.14:0,60,726	0/0:21,0:21:48:0,48,524	0/0:19,0:19:45.13:0,45,536	0/0:31,0:33:90.09:0,90,1084	0/0:19,0:19:54.14:0,54,654	1/1:10,15:25:60.18:937,60,0	1/1:11,19:29:43.33:1045,43,0	1/1:1,14:15:45.15:739,45,0	0/0:26,0:26:66.20:0,66,819	0/0:32,0:32:84.22:0,84,977	0/0:27,0:27:81.22:0,81,981	0/0:18,0:18:39.12:0,39,491
chr10	51706396	.	T	TCACACA	2241.28	PASS	AB=0.830;AC=20;AF=0.357;AN=56;BaseQRankSum=0.186;DP=516;FS=7.422;HRun=0;HaplotypeScore=135.6320;InbreedingCoeff=0.6069;MQ=61.20;MQ0=5;MQRankSum=-6.594;QD=10.62;ReadPosRankSum=-1.977;VQSLOD=1.2631;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:28,1:36:32.86:33,0,924	1/1:8,0:8:3.01:77,3,0	0/0:23,0:15:6.27:0,6,155	0/0:21,0:12:3.01:0,3,59	0/0:17,0:17:21.07:0,21,431	0/0:13,0:14:18.06:0,18,349	0/0:21,0:22:33.07:0,33,612	0/0:15,0:15:15.05:0,15,308	0/0:13,0:16:30.99:0,31,596	0/0:20,0:20:12.69:0,13,304	0/0:11,0:14:27.98:0,28,498	1/1:7,3:13:8.49:291,8,0	0/1:12,6:22:46.73:365,0,47	0/0:25,0:25:42.13:0,42,812	1/1:15,0:15:6.02:111,6,0	1/1:9,0:9:6.02:163,6,0	1/1:22,0:22:16.51:488,17,0	1/1:16,0:16:9.03:229,9,0	0/0:14,0:15:5.10:0,5,159	0/0:12,0:24:7.62:0,8,108	0/0:25,0:29:8.12:0,8,534	1/1:10,5:18:2.17:82,2,0	1/1:9,9:19:8.74:259,9,0	1/1:21,8:33:11.45:328,11,0	0/0:17,0:17:21.07:0,21,430	0/0:15,0:17:24.07:0,24,452	0/0:14,0:14:27.09:0,27,498	0/0:1,0:1:3.01:0,3,62
chr10	51706638	.	CTGTTTTCAGT	C	3986.51	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=9.580;DP=478;FS=3.959;HRun=0;HaplotypeScore=143.7715;InbreedingCoeff=0.9670;MQ=97.99;MQ0=0;MQRankSum=-9.960;QD=65.35;ReadPosRankSum=3.579;VQSLOD=3.4949;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:90.31:0,90,4688	1/1:0,3:3:6.02:200,6,0	0/0:30,0:30:74.43:0,74,3331	0/0:23,0:23:63.18:0,63,2967	0/0:10,0:10:30.09:0,30,1415	0/0:14,0:14:36.12:0,36,1798	0/0:20,0:20:60.21:0,60,3164	0/0:29,0:29:87.22:0,87,4283	0/0:18,0:18:51.08:0,51,2424	0/0:13,0:13:39.13:0,39,1932	0/0:8,0:8:18.05:0,18,792	0/0:10,0:10:30.09:0,30,1467	0/0:18,0:18:54.17:0,54,2598	0/0:19,0:19:57.15:0,57,2678	1/1:0,14:14:30.10:1000,30,0	1/1:0,7:7:18.06:570,18,0	1/1:1,19:20:36.06:1118,36,0	1/1:0,17:17:32.28:1099,32,0	0/0:26,0:26:69.06:0,69,2965	0/0:10,0:10:30.10:0,30,1590	0/0:40,0:40:99:0,117,5897	0/0:15,0:15:42.14:0,42,2200	0/0:10,0:10:30.10:0,30,1563	0/0:21,0:21:63.22:0,63,3160	0/0:15,0:15:45.15:0,45,2361	0/0:13,0:13:33.05:0,33,1663	0/0:19,0:19:57.17:0,57,2903	0/0:5,0:5:15.05:0,15,610
chr10	51706820	.	TTGAC	T	2224.52	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.044;DP=559;FS=3.994;HRun=0;HaplotypeScore=88.6611;InbreedingCoeff=0.9852;MQ=83.80;MQ0=0;MQRankSum=-2.722;QD=49.43;ReadPosRankSum=2.163;VQSLOD=4.5921;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,126,3637	1/1:0,4:4:12.04:252,12,0	0/0:20,0:20:57.20:0,57,1569	0/0:16,0:16:45.15:0,45,1229	0/0:20,0:20:60.21:0,60,1723	0/0:8,0:7:24.08:0,24,662	0/0:26,0:26:78.26:0,78,2183	0/0:29,0:29:84.29:0,84,2371	0/0:21,0:21:63.22:0,63,1813	0/0:17,0:17:51.18:0,51,1438	0/0:18,0:18:54.17:0,54,1489	0/0:17,0:17:51.18:0,51,1478	0/0:20,0:20:60.20:0,60,1621	0/0:22,0:22:66.23:0,66,1900	1/1:0,25:25:63.22:1295,63,0	1/1:0,16:16:39.13:818,39,0	0/0:17,0:17:51.18:0,51,1461	0/0:20,0:20:57.15:0,57,1558	0/0:15,0:15:45.15:0,45,1291	0/0:34,0:34:99:0,102,2936	0/0:29,0:29:87.29:0,87,2377	0/0:19,0:19:57.20:0,57,1645	0/0:15,0:15:45.15:0,45,1290	0/0:26,0:26:78.27:0,78,2248	0/0:12,0:12:36.12:0,36,1044	0/0:22,0:22:66.23:0,66,1871	0/0:23,0:23:69.24:0,69,1986	0/0:6,0:6:18.06:0,18,521
chr10	51707013	.	G	GT	946.92	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=4.544;DP=574;FS=1.286;HRun=10;HaplotypeScore=101.0655;InbreedingCoeff=0.9175;MQ=72.02;MQ0=0;MQRankSum=-5.076;QD=20.15;ReadPosRankSum=-2.835;VQSLOD=2.7066;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:28:64.63:0,65,488	1/1:2,7:9:24.03:241,24,0	0/0:13,0:13:7.61:0,8,142	0/0:14,0:14:23.09:0,23,206	0/0:22,0:23:61.93:0,62,493	0/0:12,0:11:26.93:0,27,221	0/0:14,0:14:41.95:0,42,344	0/0:28,0:29:67.91:0,68,546	0/0:24,0:24:62.74:0,63,503	0/0:34,0:34:52.17:0,52,633	0/0:24,1:26:38.96:0,39,514	0/0:10,0:10:20.02:0,20,107	0/0:12,0:12:6.08:0,6,102	0/0:18,0:19:43.98:0,44,348	1/1:8,10:18:35.93:341,36,0	1/1:3,17:20:43.11:507,43,0	0/0:31,0:31:26.42:0,26,65	0/0:18,0:18:17.43:0,17,44	0/0:25,0:25:60.80:0,61,495	0/0:35,1:36:60.85:0,61,702	0/0:17,0:17:47.88:0,48,389	0/0:24,0:24:36.84:0,37,246	0/0:17,0:17:10.81:0,11,124	0/0:23,0:23:53.71:0,54,298	0/0:19,0:19:47.93:0,48,394	0/0:31,0:31:83.48:0,83,672	0/0:18,0:19:49.97:0,50,400	0/0:8,0:8:20.96:0,21,172
chr10	51707023	.	TA	T	1601.54	PASS	AB=0.963;AC=13;AF=0.232;AN=56;BaseQRankSum=9.756;DP=576;FS=2.069;HRun=2;HaplotypeScore=101.2869;InbreedingCoeff=0.6967;MQ=69.62;MQ0=0;MQRankSum=-6.881;QD=13.46;ReadPosRankSum=-1.595;VQSLOD=2.3737;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:67.76:0,68,796	1/1:8,0:8:15.57:66,16,0	0/0:18,0:19:36.41:0,36,435	0/0:17,0:15:36.51:0,37,388	0/0:22,0:22:60.64:0,61,784	0/0:12,0:11:36.11:0,36,469	0/0:20,0:20:58.89:0,59,687	0/0:33,0:33:94.11:0,94,1143	0/0:27,0:27:74.72:0,75,915	0/0:32,0:32:93.26:0,93,1202	0/0:27,0:27:77.48:0,77,974	0/1:10,0:10:17.61:18,0,40	0/1:12,0:12:31.88:32,0,38	0/0:18,0:18:48.60:0,49,630	1/1:13,0:13:23.41:114,23,0	1/1:19,0:19:33.23:127,33,0	1/1:2,23:25:66.12:808,66,0	1/1:1,15:16:45.11:562,45,0	0/0:24,0:24:69.20:0,69,882	0/0:37,0:37:99:0,108,1372	0/0:18,0:17:51.16:0,51,675	0/0:22,0:22:24.67:0,25,117	0/1:14,2:16:35.10:60,0,35	0/0:21,0:21:30.18:0,30,157	0/0:20,0:20:60.14:0,60,754	0/0:31,0:31:89.26:0,89,1142	0/0:20,0:20:57.62:0,58,726	0/0:9,0:9:27.07:0,27,350
chr10	51707042	.	TTGTGTGTGTGTGTATGTG	T	1513.25	PASS	AB=1.000;AC=16;AF=0.286;AN=56;BaseQRankSum=8.226;DP=604;FS=3.543;HRun=0;HaplotypeScore=303.8854;InbreedingCoeff=0.6459;MQ=60.70;MQ0=4;MQRankSum=-5.727;QD=11.92;ReadPosRankSum=1.422;VQSLOD=2.1567;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:25,4:29:18.71:531,19,0	1/1:7,0:7:3:25,3,0	0/0:28,0:20:8.82:0,9,129	0/0:22,0:14:2.88:0,3,167	0/0:24,0:24:48.15:0,48,2882	0/0:15,0:14:23.91:0,24,1598	0/0:24,0:24:54.17:0,54,3180	0/0:43,0:41:58.07:0,58,1960	0/0:31,0:32:60.20:0,60,3881	0/0:34,0:34:41.35:0,41,1700	0/0:23,0:23:30.09:0,30,1921	0/1:11,0:11:52.10:121,0,52	1/1:8,0:8:15.05:220,15,0	0/0:25,0:25:63.22:0,63,3516	1/1:11,0:11:9.03:207,9,0	1/1:17,0:17:15.05:333,15,0	0/0:20,0:21:1.75:0,2,89	0/1:11,0:11:11.38:56,0,11	0/0:27,0:23:18.06:0,18,1116	0/0:34,0:34:66.21:0,66,4307	0/0:26,0:25:48.07:0,48,2342	1/1:20,0:20:12.02:147,12,0	1/1:13,0:13:2.98:52,3,0	0/0:21,0:21:1.55:0,2,4	0/0:22,0:22:42.13:0,42,2618	0/0:30,0:30:45.15:0,45,2655	0/0:20,0:20:42.13:0,42,2735	0/0:6,0:6:9.03:0,9,549
chr10	51707054	.	GTA	G	1146.39	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=11.487;DP=562;FS=8.388;HRun=0;HaplotypeScore=116.7944;InbreedingCoeff=0.8925;MQ=56.96;MQ0=8;MQRankSum=-5.224;QD=8.19;ReadPosRankSum=-0.166;VQSLOD=2.4827;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:26:7.87:8,0,202	1/1:4,2:6:5.55:48,6,0	0/0:26,0:17:15.10:0,15,423	0/0:22,0:12:27.08:0,27,354	0/0:22,0:22:43.77:0,44,825	0/0:16,0:15:41.34:0,41,518	0/0:28,0:28:72.14:0,72,1174	0/0:44,0:39:99:0,113,1633	0/0:30,0:29:57.97:0,58,1189	0/0:25,2:27:31.46:0,31,949	0/0:18,0:18:45.08:0,45,672	1/1:3,7:10:16.23:146,16,0	1/1:1,6:7:20.94:178,21,0	0/0:27,0:27:33.22:0,33,1132	1/1:3,4:7:9:81,9,0	1/1:4,6:10:20.90:174,21,0	1/1:14,0:14:10.91:68,11,0	1/1:10,2:12:22.48:174,22,0	0/0:20,0:15:44.80:0,45,549	0/0:36,0:36:96.27:0,96,1470	0/0:31,0:29:77.92:0,78,1055	1/1:11,6:17:23.51:199,24,0	1/1:7,3:10:14.95:120,15,0	1/1:21,0:21:20.93:164,21,0	0/0:20,0:20:56.79:0,57,877	0/0:29,0:29:80.55:0,81,1149	0/0:19,0:19:52.32:0,52,849	0/0:7,0:7:21.01:0,21,278
chr10	51707062	.	GTGTGTGTGTGTA	G	2339.64	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=8.371;DP=596;FS=20.942;HRun=0;HaplotypeScore=215.6943;InbreedingCoeff=0.6542;MQ=50.25;MQ0=12;MQRankSum=-6.423;QD=16.95;ReadPosRankSum=1.969;VQSLOD=0.9544;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:30:99:198,0,182	0/1:7,0:7:0:0,0,0	0/0:25,0:10:8.97:0,9,102	0/0:28,0:12:4.01:0,4,152	0/0:23,0:23:54.04:0,54,2200	0/0:15,0:14:32.77:0,33,1591	0/0:30,0:30:66.19:0,66,2789	0/0:39,0:34:74.35:0,74,1851	0/0:27,0:26:63.14:0,63,2813	0/0:27,0:27:39.18:0,39,1773	0/0:20,0:20:39.12:0,39,1668	1/1:9,1:10:20.92:402,21,0	1/1:8,0:8:18.03:542,18,0	0/0:31,0:31:82.09:0,82,3088	1/1:5,3:8:9.03:270,9,0	1/1:11,3:13:15.05:468,15,0	0/0:17,0:17:3.30:0,3,68	0/1:15,0:15:46.39:199,0,46	0/0:22,0:15:42.06:0,42,1137	0/0:34,0:34:81.28:0,81,3733	0/0:38,0:36:72.96:0,73,2391	1/1:17,0:17:9.03:314,9,0	1/1:9,0:9:3.01:105,3,0	1/1:20,0:20:2.70:20,3,0	0/0:21,0:21:54.16:0,54,2264	0/0:34,0:34:74.37:0,74,2544	0/0:21,0:21:57.16:0,57,2268	0/0:6,0:6:11.94:0,12,399
chr10	51707064	.	GTGTGTGTGTA	G	1854.18	PASS	AB=0.950;AC=17;AF=0.304;AN=56;BaseQRankSum=8.513;DP=591;FS=17.475;HRun=0;HaplotypeScore=198.4921;InbreedingCoeff=0.6694;MQ=49.84;MQ0=13;MQRankSum=-6.690;QD=13.24;ReadPosRankSum=0.830;VQSLOD=1.2594;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:30:99:206,0,202	0/1:6,0:6:0:0,0,0	0/0:25,0:10:5.11:0,5,66	0/0:28,0:12:3.79:0,4,180	0/0:23,0:23:54.07:0,54,1814	0/0:14,0:13:34.36:0,34,1342	0/0:31,0:31:69.20:0,69,2436	0/0:40,0:36:83.32:0,83,1730	0/0:30,0:29:72.09:0,72,2481	0/0:25,0:25:39.17:0,39,1512	0/0:18,0:18:39.12:0,39,1404	1/1:5,6:11:18.23:284,18,0	1/1:3,5:8:18.02:406,18,0	0/0:30,0:30:83:0,83,2653	1/1:8,0:8:8.50:235,8,0	1/1:15,1:15:17.73:412,18,0	0/0:17,0:17:3.33:0,3,53	0/1:13,2:15:8.96:150,0,9	0/0:22,0:14:42.09:0,42,996	0/0:34,0:34:81.27:0,81,3136	0/0:38,0:36:76.06:0,76,2083	1/1:12,5:17:9.92:234,10,0	1/1:7,3:10:5.69:88,6,0	1/1:19,0:19:2.95:20,3,0	0/0:20,0:20:54.16:0,54,1946	0/0:30,0:30:73.97:0,74,2227	0/0:21,0:21:57.16:0,57,1928	0/0:4,0:4:11.94:0,12,349
chr10	51707074	.	ATG	A	158.91	PASS	AB=0.988;AC=14;AF=0.259;AN=54;BaseQRankSum=7.784;DP=553;FS=3.962;HRun=0;HaplotypeScore=121.3049;InbreedingCoeff=0.1670;MQ=53.86;MQ0=11;MQRankSum=-5.373;QD=0.95;ReadPosRankSum=4.236;VQSLOD=2.0717;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:28,1:29:57.31:57,0,285	./.	0/0:22,0:10:18.52:0,19,229	0/0:29,0:13:23.39:0,23,245	0/1:20,2:22:24.71:25,0,581	0/0:16,0:15:10.81:0,11,593	0/0:36,1:37:46.96:0,47,1162	0/0:40,0:35:32.18:0,32,862	0/0:26,0:25:6.85:0,7,805	0/0:24,0:24:42.14:0,42,664	0/0:16,0:16:2.44:0,2,521	0/1:13,0:13:9.28:29,0,9	0/1:8,0:8:8.40:47,0,8	0/0:26,1:27:28.62:0,29,901	0/1:6,0:6:7.48:28,0,7	0/1:12,0:11:1.08:48,0,1	0/1:16,0:16:1.91:2,0,13	0/1:10,0:10:7.86:8,0,62	0/1:22,0:16:0.83:1,0,448	0/0:27,1:28:33.28:0,33,1000	0/0:33,1:32:34.99:0,35,930	1/1:9,0:9:8.48:41,8,0	1/1:7,0:7:2.79:13,3,0	0/1:13,0:13:0.02:0,0,0	0/0:23,0:23:59.72:0,60,908	0/0:30,0:30:35.02:0,35,931	0/0:21,2:23:23.02:0,23,844	0/0:6,0:6:12.04:0,12,187
chr10	51707166	.	GTC	G	286.46	PASS	AB=0.968;AC=12;AF=0.222;AN=54;BaseQRankSum=8.301;DP=760;FS=16.851;HRun=0;HaplotypeScore=128.0263;InbreedingCoeff=0.6045;MQ=51.65;MQ0=36;MQRankSum=-4.172;QD=2.22;ReadPosRankSum=0.192;VQSLOD=1.5776;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:43:57.14:0,57,894	./.	0/0:50,0:7:10.55:0,11,144	0/0:97,2:25:30.53:0,31,460	0/0:22,1:23:16.67:0,17,796	0/0:21,0:21:42.11:0,42,643	0/0:31,0:31:39.37:0,39,932	0/0:38,0:34:66.19:0,66,975	0/0:33,0:33:84.26:0,84,1326	0/0:26,0:26:75.17:0,75,1088	0/0:23,0:23:57.18:0,57,908	0/0:15,0:15:5.99:0,6,50	1/1:18,0:18:3.79:20,4,0	0/0:23,0:23:38.69:0,39,980	1/1:16,0:16:11.94:109,12,0	1/1:13,0:13:11.81:75,12,0	1/1:21,0:21:16.97:117,17,0	0/1:12,0:10:14.41:81,0,14	0/1:27,2:24:23.89:24,0,592	0/0:21,0:21:60.14:0,60,961	0/0:55,2:58:72.26:0,72,2039	0/0:23,0:22:3:0,3,25	1/1:20,0:20:2.87:19,3,0	0/0:18,0:18:2.16:0,2,21	0/0:16,0:16:39.13:0,39,632	0/0:29,0:29:69.21:0,69,1088	0/0:22,0:22:57.12:0,57,836	0/0:15,0:14:36.12:0,36,583
chr10	51707178	.	CTCTG	C	866.17	PASS	AB=0.912;AC=8;AF=0.148;AN=54;BaseQRankSum=6.879;DP=721;FS=8.074;HRun=0;HaplotypeScore=140.0716;InbreedingCoeff=0.5671;MQ=51.69;MQ0=31;MQRankSum=-2.786;QD=10.31;ReadPosRankSum=-2.439;VQSLOD=1.5821;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:57.14:0,57,1479	./.	0/0:43,0:6:6.36:0,6,195	0/0:79,0:20:37.10:0,37,773	0/0:21,0:21:54.05:0,54,1419	0/0:19,0:19:42.11:0,42,1051	0/0:30,0:30:39.39:0,39,1594	0/0:31,0:28:84.07:0,84,1803	0/0:35,0:34:92.27:0,92,2243	0/0:30,0:30:87.08:0,87,1883	0/0:20,0:20:57.20:0,57,1530	0/0:13,0:13:6.02:0,6,93	0/0:17,0:17:5.15:0,5,47	0/0:28,0:28:83.52:0,84,1814	1/1:8,10:18:11.90:163,12,0	1/1:3,12:15:11.92:236,12,0	1/1:14,5:19:8.97:305,9,0	0/1:11,3:12:14.36:288,0,14	0/0:24,0:20:59.81:0,60,1141	0/0:24,0:24:63.20:0,63,1657	0/0:57,0:57:99:0,155,3617	0/0:21,1:22:3:0,3,25	0/1:18,0:18:13.59:14,0,17	0/0:17,0:17:9:0,9,90	0/0:17,0:17:42.13:0,42,1097	0/0:31,0:31:85.83:0,86,1925	0/0:21,0:21:61.40:0,61,1408	0/0:14,0:12:36.12:0,36,963
chr10	51707182	.	GTGTGTCTCTGTCTCTGTCTC	G	955.55	PASS	AB=1.000;AC=11;AF=0.220;AN=50;BaseQRankSum=8.299;DP=695;FS=16.280;HRun=0;HaplotypeScore=278.7268;InbreedingCoeff=0.5558;MQ=51.92;MQ0=29;MQRankSum=-6.011;QD=8.61;ReadPosRankSum=-2.079;VQSLOD=0.3962;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:54.13:0,54,2357	./.	0/0:38,0:6:13.72:0,14,207	0/0:70,0:19:29.31:0,29,593	0/0:21,0:21:54.19:0,54,3258	0/0:18,0:18:45.63:0,46,2481	0/0:28,0:28:58.12:0,58,2976	0/0:35,0:32:81.27:0,81,2409	0/0:34,0:33:90.27:0,90,4339	0/0:28,0:28:81.27:0,81,3720	0/0:21,0:21:54.15:0,54,2820	./.	1/1:0,17:17:12.51:470,13,0	0/0:28,0:28:75.26:0,75,4143	0/1:16,0:17:13.76:14,0,21	1/1:16,0:16:11.11:127,11,0	0/1:15,0:17:45.69:147,0,46	0/1:11,0:11:21.20:271,0,21	0/0:22,0:19:32.53:0,33,2088	0/0:24,0:24:63.21:0,63,3322	0/0:56,0:56:99:0,139,6378	./.	1/1:1,16:17:3:25,3,0	1/1:13,1:14:6:51,6,0	0/0:17,0:17:42.14:0,42,2269	0/0:29,0:29:82.82:0,83,3467	0/0:20,0:20:57.14:0,57,2664	0/0:14,0:12:36.07:0,36,1917
chr10	51707196	.	CTG	C	224.25	PASS	AB=0.847;AC=6;AF=0.120;AN=50;BaseQRankSum=7.482;DP=623;FS=0.000;HRun=0;HaplotypeScore=109.7875;InbreedingCoeff=0.4179;MQ=49.33;MQ0=27;MQRankSum=-6.273;QD=3.40;ReadPosRankSum=-1.025;VQSLOD=1.6848;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:45:39.09:0,39,675	./.	0/0:21,0:3:2.90:0,3,58	0/0:38,0:7:5.83:0,6,105	0/0:22,0:22:57.16:0,57,1024	0/0:18,0:18:45.14:0,45,828	0/0:26,0:26:48.13:0,48,849	0/0:34,0:30:72.16:0,72,1390	0/0:30,0:29:72.38:0,72,1328	0/0:30,0:30:84.18:0,84,1470	0/0:19,0:19:48.15:0,48,867	./.	1/1:18,0:18:12.41:109,12,0	0/0:24,0:24:69.21:0,69,1248	0/0:15,3:18:1.96:0,2,40	0/1:12,4:16:27.53:28,0,43	0/1:15,2:17:26.27:76,0,26	1/1:11,4:13:1.51:128,2,0	0/0:21,0:18:54.07:0,54,878	0/0:24,0:24:63.12:0,63,1109	0/0:47,0:46:99:0,116,1976	./.	0/0:17,0:17:0:0,0,0	0/0:11,1:12:0:0,0,0	0/0:18,0:18:39.12:0,39,720	0/0:29,0:28:76.01:0,76,1226	0/0:17,0:17:50.84:0,51,886	0/0:10,0:9:27.09:0,27,513
chr10	51707200	.	C	CTG	94.52	PASS	AB=0.948;AC=7;AF=0.130;AN=54;BaseQRankSum=5.114;DP=618;FS=0.000;HRun=0;HaplotypeScore=121.5427;InbreedingCoeff=0.4386;MQ=47.85;MQ0=26;MQRankSum=-4.981;QD=0.96;ReadPosRankSum=0.956;VQSLOD=2.2632;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:46:33.07:0,33,504	0/0:3,0:3:0:0,0,0	0/0:15,0:2:3.01:0,3,46	0/0:33,0:6:6.02:0,6,92	0/0:22,0:22:54.18:0,54,812	0/0:18,0:18:42.13:0,42,643	0/0:26,0:26:41.99:0,42,619	0/0:36,0:32:86.31:0,86,1246	0/0:29,0:28:72.22:0,72,1067	0/0:30,0:30:81.27:0,81,1210	0/0:19,0:19:48.13:0,48,691	./.	1/1:18,0:18:11.59:65,12,0	0/0:25,0:25:66.22:0,66,998	0/1:19,0:19:0.15:0,0,0	0/0:16,0:16:9.15:0,9,54	0/1:14,2:16:26.60:49,0,27	0/1:13,1:13:86.31:86,0,99	0/0:22,0:19:54.11:0,54,765	0/0:25,0:25:60.14:0,60,870	0/0:47,0:45:99:0,115,1598	0/1:20,0:20:0:0,0,0	0/0:18,0:18:0:0,0,0	0/1:10,1:11:0:0,0,0	0/0:18,0:18:42.11:0,42,600	0/0:27,0:26:69.06:0,69,1012	0/0:18,0:17:50.96:0,51,744	0/0:11,0:10:27.09:0,27,412
chr10	51707204	.	GTCTCTGTCTCTCTC	G	932.99	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=6.872;DP=611;FS=18.920;HRun=0;HaplotypeScore=202.1540;InbreedingCoeff=0.6149;MQ=46.81;MQ0=25;MQRankSum=-5.970;QD=13.72;ReadPosRankSum=1.180;VQSLOD=1.3637;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:43:33.56:0,34,1388	1/1:2,1:3:2.98:21,3,0	0/0:10,0:1:3.01:0,3,98	0/0:24,0:4:6.02:0,6,104	0/0:22,0:22:54.16:0,54,2243	0/0:18,0:18:46.04:0,46,2113	0/0:27,0:26:43:0,43,1717	0/0:36,0:32:93.31:0,93,2563	0/0:28,0:27:66.23:0,66,2950	0/0:31,0:31:90.31:0,90,3683	0/0:19,0:19:48.15:0,48,2030	0/0:14,0:14:0.89:0,1,2	1/1:18,0:18:8.48:221,8,0	0/0:26,0:26:75.26:0,75,3525	0/0:14,5:19:2.20:0,2,7	1/1:11,5:16:7.15:166,7,0	1/1:16,1:17:14.60:232,15,0	0/1:14,0:13:44.99:431,0,45	0/0:23,0:20:54.18:0,54,1742	0/0:25,0:25:60.12:0,60,2551	0/0:49,0:46:99:0,110,4775	0/0:23,0:23:0.94:0,1,3	0/0:19,0:19:0.47:0,0,1	0/0:10,0:10:0.47:0,0,1	0/0:19,0:19:45.10:0,45,2011	0/0:24,0:23:69.21:0,69,2678	0/0:18,0:17:34.90:0,35,1774	0/0:11,0:10:29.98:0,30,1043
chr10	51707214	.	C	CTG	275.68	PASS	AB=0.912;AC=11;AF=0.212;AN=52;BaseQRankSum=7.651;DP=610;FS=15.984;HRun=0;HaplotypeScore=139.4361;InbreedingCoeff=0.4089;MQ=44.72;MQ0=23;MQRankSum=-6.401;QD=2.09;ReadPosRankSum=1.466;VQSLOD=1.9371;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:42:24.03:0,24,353	0/1:3,1:4:13.78:15,0,14	./.	./.	0/0:26,0:26:50.92:0,51,668	0/0:20,0:20:48.11:0,48,649	0/0:29,0:28:39.40:0,39,494	0/0:37,0:34:98.75:0,99,1151	0/0:25,0:23:58.97:0,59,880	0/0:30,0:30:87.19:0,87,1159	0/0:18,0:18:42.57:0,43,569	0/0:13,0:13:1.25:0,1,3	0/1:15,0:15:0.54:24,0,1	0/0:32,0:32:85.50:0,85,1198	0/0:17,2:19:1.09:0,1,3	0/1:15,1:16:16.78:27,0,17	1/1:18,2:20:10.57:145,11,0	0/1:14,3:16:20.63:182,0,21	0/0:23,0:19:44.77:0,45,537	0/0:23,0:23:44.26:0,44,628	0/0:54,0:49:97.96:0,98,1336	1/1:23,0:23:0.94:2,1,0	0/1:19,0:19:0:0,0,0	1/1:17,0:17:0.89:2,1,0	0/0:17,0:17:42.14:0,42,625	0/0:26,0:25:66.96:0,67,878	0/0:15,0:14:38.68:0,39,490	0/0:14,0:12:23.94:0,24,257
chr10	51707218	.	CTGTGTGTGTGTG	C	63.28	PASS	AB=0.945;AC=10;AF=0.192;AN=52;BaseQRankSum=4.725;DP=625;FS=2.840;HRun=0;HaplotypeScore=213.0748;InbreedingCoeff=0.3169;MQ=44.34;MQ0=22;MQRankSum=-4.899;QD=0.40;ReadPosRankSum=-1.580;VQSLOD=2.5820;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:25,23:44:56.07:82,0,56	1/1:4,0:4:2.65:24,3,0	./.	./.	0/0:29,0:29:33.06:0,33,1212	0/0:20,0:20:33.10:0,33,1496	0/0:28,0:28:13.40:0,13,507	0/0:38,0:36:38.90:0,39,455	0/0:25,0:23:39.12:0,39,1440	0/0:33,0:33:54.01:0,54,1739	0/0:20,0:19:21.07:0,21,931	1/1:13,0:13:2.74:12,3,0	0/1:15,0:15:10.06:10,0,16	0/0:32,0:35:60.18:0,60,2349	0/0:20,0:20:6.58:0,7,19	0/1:18,0:18:5.58:12,0,6	0/1:22,0:21:30.83:42,0,31	0/0:20,0:18:27.32:0,27,275	0/0:21,0:17:15.01:0,15,398	0/0:25,0:25:27.07:0,27,844	0/0:55,0:50:61.36:0,61,1829	0/0:20,0:20:1.88:0,2,4	0/1:18,0:18:0:0,0,0	0/1:18,0:18:0.02:0,0,0	0/0:16,0:17:24.05:0,24,799	0/0:27,0:28:51.07:0,51,1333	0/0:14,0:13:18.06:0,18,721	0/0:9,0:7:11.96:0,12,311
chr10	51707222	.	G	GTC	311.99	PASS	AB=0.900;AC=15;AF=0.288;AN=52;BaseQRankSum=7.497;DP=614;FS=0.000;HRun=0;HaplotypeScore=132.3242;InbreedingCoeff=0.5748;MQ=43.98;MQ0=20;MQRankSum=-4.258;QD=1.84;ReadPosRankSum=0.349;VQSLOD=2.2995;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:42:26.27:0,26,201	1/1:4,0:4:5.78:32,6,0	./.	./.	0/0:32,0:32:60.43:0,60,606	0/0:19,0:19:24.89:0,25,520	0/0:27,0:25:29.24:0,29,297	0/0:38,0:36:99:0,101,712	0/0:26,0:24:46.94:0,47,661	0/0:33,0:33:59.13:0,59,828	0/0:18,0:17:35.96:0,36,394	1/1:11,1:13:3.01:51,3,0	1/1:12,3:15:7.65:112,8,0	0/0:35,0:35:72.98:0,73,964	0/1:17,0:21:0.15:0,0,0	0/1:17,1:19:4.56:83,0,5	1/1:22,0:21:2.20:78,2,0	0/1:18,2:18:88.48:88,0,113	0/0:17,0:14:35.70:0,36,331	0/0:25,0:25:44.98:0,45,457	0/0:52,0:46:88.92:0,89,906	1/1:16,4:20:0.94:2,1,0	0/1:15,1:17:0:0,0,0	0/1:18,0:19:0:0,0,0	0/0:16,0:16:39.01:0,39,407	0/0:30,0:29:78.07:0,78,663	0/0:15,0:14:35.94:0,36,349	0/0:7,0:5:11.51:0,12,114
chr10	51707260	.	GTC	G	1250.42	PASS	AB=0.929;AC=20;AF=0.357;AN=56;BaseQRankSum=8.494;DP=699;FS=14.798;HRun=0;HaplotypeScore=140.2531;InbreedingCoeff=0.8174;MQ=56.23;MQ0=15;MQRankSum=-4.966;QD=6.25;ReadPosRankSum=-1.202;VQSLOD=2.0119;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:49:47.27:0,47,388	0/1:5,1:6:0.13:41,0,0	0/0:45,0:23:20.35:0,20,312	0/0:51,0:28:1.67:0,2,232	0/0:26,0:25:62.56:0,63,673	0/0:22,0:22:26.38:0,26,668	0/0:24,0:22:18.78:0,19,339	0/0:31,0:29:44.27:0,44,619	0/0:31,0:30:75.89:0,76,865	0/0:33,0:33:41.55:0,42,839	0/0:18,0:17:41.78:0,42,509	1/1:16,0:16:11.30:75,11,0	1/1:12,0:12:6.85:53,7,0	0/0:34,0:34:79.51:0,80,1074	1/1:19,1:21:5.90:130,6,0	1/1:25,1:28:24.74:216,25,0	1/1:26,1:26:31.03:240,31,0	1/1:25,1:24:41.30:414,41,0	0/0:17,0:12:35.57:0,36,335	0/0:24,0:24:49.32:0,49,545	0/0:31,0:27:50.95:0,51,711	1/1:17,0:17:11.43:98,11,0	1/1:14,1:15:17.14:133,17,0	1/1:20,0:20:5.33:48,5,0	0/0:12,0:12:21.66:0,22,346	0/0:29,0:29:10.37:0,10,503	0/0:20,0:19:42.19:0,42,444	0/1:12,0:11:0.81:1,0,178
chr10	51708305	.	CTCT	C	4298.80	PASS	AB=0.523;AC=9;AF=0.161;AN=56;BaseQRankSum=14.437;DP=628;FS=3.777;HRun=0;HaplotypeScore=101.8992;InbreedingCoeff=0.9177;MQ=90.72;MQ0=0;MQRankSum=-3.876;QD=42.15;ReadPosRankSum=1.430;VQSLOD=6.4770;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,111,2471	1/1:0,7:7:14.71:248,15,0	0/0:24,0:24:59.55:0,60,1243	0/0:33,0:33:96.29:0,96,1973	0/0:19,0:19:54.19:0,54,1206	0/0:16,0:16:48.16:0,48,1087	0/0:26,0:26:78.27:0,78,1731	0/0:20,0:20:57.18:0,57,1202	0/0:26,0:26:72.25:0,72,1632	0/0:29,0:29:84.28:0,84,1850	0/0:19,0:19:57.20:0,57,1292	0/0:26,0:26:75.26:0,75,1678	0/0:14,0:14:42.14:0,42,932	0/0:22,0:22:66.23:0,66,1496	1/1:2,22:24:66.23:1099,66,0	0/1:2,21:23:1.79:983,0,2	1/1:0,30:30:81.28:1349,81,0	1/1:1,17:18:39.09:620,39,0	0/0:18,0:18:48.16:0,48,1075	0/0:22,0:22:57.20:0,57,1276	0/0:16,0:16:45.15:0,45,1020	0/0:22,0:22:66.23:0,66,1484	0/0:21,0:21:60.21:0,60,1359	0/0:30,0:30:90.30:0,90,1956	0/0:24,0:24:72.25:0,72,1632	0/0:27,0:27:75.26:0,75,1662	0/0:24,0:24:72.25:0,72,1631	0/0:7,0:7:21.07:0,21,476
chr10	51709190	.	TA	T	865.90	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=5.035;DP=555;FS=1.923;HRun=10;HaplotypeScore=65.5667;InbreedingCoeff=0.8820;MQ=72.16;MQ0=6;MQRankSum=0.233;QD=9.31;ReadPosRankSum=0.705;VQSLOD=2.4038;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:99:0,99,1092	0/0:7,0:7:12.69:0,13,61	0/0:34,0:14:20.36:0,20,165	0/1:41,0:22:5.48:5,0,214	0/0:31,0:31:61.79:0,62,864	0/0:18,0:18:54.15:0,54,597	0/0:16,0:16:42.10:0,42,454	0/0:26,0:27:62.97:0,63,650	0/0:14,0:14:33.08:0,33,358	0/0:29,0:29:72.19:0,72,791	0/0:17,0:17:42.10:0,42,456	1/1:1,11:12:23.99:208,24,0	1/1:3,12:15:32.99:286,33,0	0/0:11,0:11:24.05:0,24,256	0/0:16,0:16:15.41:0,15,170	0/0:16,0:16:37.58:0,38,201	0/0:8,0:33:48.45:0,48,252	0/0:1,0:16:34.09:0,34,170	0/0:21,1:22:25:0,25,477	0/0:35,0:35:87.04:0,87,913	0/0:5,0:5:12.01:0,12,123	1/1:0,5:5:15:130,15,0	1/1:0,13:13:35.65:305,36,0	1/1:1,6:7:12:104,12,0	0/0:20,0:20:57.14:0,57,621	0/0:21,0:21:57.14:0,57,617	0/0:29,0:29:78.19:0,78,852	0/0:12,0:12:27.07:0,27,299
chr10	51709907	.	C	CA	4776.36	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=12.296;DP=674;FS=0.000;HRun=3;HaplotypeScore=85.1201;InbreedingCoeff=0.9999;MQ=88.21;MQ0=0;MQRankSum=-2.603;QD=41.53;ReadPosRankSum=2.636;VQSLOD=4.1156;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,126,1736	0/0:16,0:16:48.15:0,48,654	0/0:18,0:18:51.13:0,51,653	0/0:31,0:31:66.19:0,66,965	0/0:27,0:27:81.27:0,81,1132	0/0:12,0:12:36.07:0,36,465	0/0:23,0:23:69.20:0,69,922	0/0:36,0:36:99:0,105,1453	0/0:28,0:28:84.28:0,84,1172	0/0:28,0:28:84.28:0,84,1175	0/0:15,0:15:45.15:0,45,629	1/1:0,19:19:51.17:768,51,0	1/1:0,27:27:81.27:1218,81,0	0/0:24,0:24:72.24:0,72,1007	0/0:26,0:26:78.21:0,78,1038	0/0:28,0:28:81.27:0,81,1132	0/0:28,0:28:84.25:0,84,1138	0/0:16,0:16:45.15:0,45,628	0/0:26,0:26:78.25:0,78,1076	0/0:20,0:20:60.19:0,60,820	0/0:32,0:32:96.30:0,96,1325	1/1:0,21:21:54.18:808,54,0	1/1:0,16:17:44.78:676,45,0	1/1:0,31:31:87.29:1306,87,0	0/0:23,0:23:69.23:0,69,964	0/0:19,0:19:57.18:0,57,780	0/0:25,0:25:75.23:0,75,1031	0/0:14,0:14:42.14:0,42,587
chr10	51711250	.	T	TTGTG	1278.88	PASS	AB=1.000;AC=14;AF=0.250;AN=56;BaseQRankSum=7.337;DP=747;FS=10.242;HRun=0;HaplotypeScore=158.4665;InbreedingCoeff=0.5702;MQ=68.41;MQ0=5;MQRankSum=-5.681;QD=5.81;ReadPosRankSum=-2.281;VQSLOD=1.8167;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:42:96.30:0,96,1547	0/1:12,0:11:7.19:7,0,151	0/0:41,0:27:27.45:0,27,472	0/0:44,0:33:28.14:0,28,539	0/0:31,0:31:69.22:0,69,1124	0/0:21,0:22:38.47:0,38,617	0/0:25,0:25:63.15:0,63,922	0/0:31,0:31:57.16:0,57,828	0/0:21,0:21:54.16:0,54,881	0/0:23,0:24:39.33:0,39,660	0/0:25,0:25:60.14:0,60,894	1/1:5,23:28:9.03:199,9,0	1/1:32,0:32:30.09:518,30,0	0/0:24,0:24:48.14:0,48,763	0/1:33,0:32:25.28:25,0,307	0/1:20,0:20:19.16:19,0,253	0/1:20,0:20:39.43:39,0,255	0/0:12,0:12:20.99:0,21,257	0/0:27,0:27:45.13:0,45,715	0/0:27,0:27:72.20:0,72,1133	0/0:43,0:42:99:0,108,1712	1/1:25,0:26:5.77:75,6,0	1/1:22,0:21:27.08:457,27,0	1/1:27,0:27:6.02:112,6,0	0/0:22,0:22:62.54:0,63,941	0/0:34,0:34:84.05:0,84,1275	0/0:20,0:20:48.08:0,48,690	0/0:10,0:10:27.09:0,27,461
chr10	51711257	.	T	TGTGT	426.90	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=3.224;DP=755;FS=1.952;HRun=0;HaplotypeScore=141.5887;InbreedingCoeff=0.6969;MQ=68.03;MQ0=6;MQRankSum=-0.587;QD=2.53;ReadPosRankSum=-1.962;VQSLOD=2.3667;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:39:96.30:0,96,1547	0/0:10,0:9:15.03:0,15,169	0/0:42,0:27:27.45:0,27,472	0/0:51,0:36:27.96:0,28,538	0/0:32,0:32:69.22:0,69,1124	0/0:20,0:20:38.47:0,38,617	0/0:26,0:26:63.15:0,63,922	0/0:29,0:29:57.16:0,57,828	0/0:21,0:21:54.16:0,54,881	0/0:28,0:28:39.33:0,39,660	0/0:26,0:26:60.14:0,60,894	1/1:28,0:28:3.01:75,3,0	1/1:13,16:30:3.48:31,3,0	0/0:20,0:20:48.14:0,48,763	0/1:33,0:32:25.29:25,0,307	0/0:22,0:22:24:0,24,283	0/0:19,0:19:4.41:0,4,268	0/0:12,0:12:20.97:0,21,257	0/0:27,0:27:51.15:0,51,800	0/0:29,0:29:72.20:0,72,1133	0/0:42,0:41:99:0,108,1712	1/1:27,0:27:5.60:74,6,0	1/1:22,0:21:21.05:320,21,0	1/1:29,0:29:3.01:49,3,0	0/0:24,0:24:62.54:0,63,941	0/0:34,0:34:84.05:0,84,1275	0/0:21,0:21:48.08:0,48,690	0/0:10,0:10:27.09:0,27,461
chr10	51712203	.	TTAGA	T	771.69	PASS	AB=0.823;AC=9;AF=0.173;AN=52;BaseQRankSum=0.941;DP=618;FS=0.000;HRun=0;HaplotypeScore=103.9129;InbreedingCoeff=0.5503;MQ=71.69;MQ0=2;MQRankSum=-0.465;QD=7.28;ReadPosRankSum=-1.131;VQSLOD=2.3818;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:9,10:19:3.55:187,0,4	0/0:9,0:14:8.93:0,9,136	./.	./.	0/0:37,0:37:45.13:0,45,973	1/1:10,16:26:9.03:139,9,0	1/1:17,0:17:27.02:302,27,0	0/0:47,0:47:8.90:0,9,60	1/1:5,9:14:6.02:93,6,0	0/0:25,0:25:51.16:0,51,1007	0/0:33,0:33:54.14:0,54,997	0/0:26,0:26:39.02:0,39,678	0/0:6,0:13:9.03:0,9,162	0/0:13,0:13:18.02:0,18,279	0/0:27,0:27:63.17:0,63,1225	0/0:27,0:27:39.12:0,39,802	0/1:17,0:17:34.99:158,0,35	0/1:10,3:13:13.56:39,0,14	0/0:18,0:18:12.04:0,12,265	0/0:29,0:29:42.11:0,42,804	0/0:11,0:11:15.04:0,15,285	0/0:19,0:19:27.03:0,27,480	0/0:28,0:28:11.95:0,12,743	0/0:14,0:14:15.02:0,15,259	0/0:26,0:26:45.14:0,45,946	0/0:26,0:25:42.12:0,42,854	0/0:33,0:32:45.10:0,45,887	0/0:12,0:12:18.01:0,18,328
chr10	51712535	.	A	AT	2048.45	PASS	AB=0.765;AC=18;AF=0.321;AN=56;BaseQRankSum=-2.387;DP=512;FS=3.935;HRun=11;HaplotypeScore=58.9352;InbreedingCoeff=0.8633;MQ=77.91;MQ0=2;MQRankSum=-2.019;QD=15.64;ReadPosRankSum=-2.330;VQSLOD=3.6047;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:53.70:0,54,409	1/1:3,1:7:11.53:73,12,0	0/0:25,0:20:25.69:0,26,173	0/0:19,0:18:9.46:0,9,102	0/0:33,1:35:49.23:0,49,556	0/0:15,0:15:38.84:0,39,302	0/0:13,0:13:26.89:0,27,209	0/0:29,1:30:20.33:0,20,341	0/0:8,0:8:17.93:0,18,139	0/0:28,0:28:65.71:0,66,509	0/0:18,0:18:47.79:0,48,367	0/1:1,8:9:2.19:162,0,2	1/1:7,11:18:8.91:306,9,0	0/0:19,0:19:44.81:0,45,348	1/1:5,1:24:42.90:236,43,0	1/1:1,1:15:34.25:187,34,0	1/1:2,13:15:18.85:373,19,0	0/1:3,0:3:0:0,0,0	0/0:22,1:23:5.35:0,5,221	0/0:37,0:38:85.69:0,86,656	0/0:7,0:8:10.96:0,11,75	1/1:3,11:14:9.79:270,10,0	1/1:0,18:18:45.09:457,45,0	1/1:0,7:7:18.04:183,18,0	0/0:21,0:21:50.76:0,51,391	0/0:26,0:26:56.72:0,57,439	0/0:14,0:14:29.84:0,30,232	0/0:12,0:13:37.90:0,38,284
chr10	51712972	.	GTCTGTC	G	1180.68	PASS	AB=1.000;AC=8;AF=0.143;AN=56;BaseQRankSum=6.248;DP=722;FS=12.571;HRun=0;HaplotypeScore=145.1063;InbreedingCoeff=0.7163;MQ=62.73;MQ0=15;MQRankSum=-5.742;QD=6.63;ReadPosRankSum=0.411;VQSLOD=2.0335;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:29:63.11:0,63,1412	1/1:2,6:7:15.05:302,15,0	0/0:40,0:14:4.97:0,5,429	0/1:81,0:33:2.09:2,0,211	0/0:27,0:27:69.19:0,69,1892	0/0:24,0:24:66.16:0,66,1651	0/0:20,0:20:48.11:0,48,1179	0/0:39,0:39:75.21:0,75,1742	0/0:28,0:28:78.22:0,78,2295	0/0:16,0:16:36.07:0,36,798	0/0:19,0:19:33.08:0,33,915	0/0:20,0:20:45.14:0,45,1341	0/0:17,0:17:42.10:0,42,1104	0/0:18,0:18:36.08:0,36,879	1/1:4,16:20:17.76:374,18,0	1/1:10,19:29:29.72:634,30,0	0/1:36,0:36:15.56:16,0,1258	0/0:27,0:24:19.82:0,20,736	0/0:18,0:18:39.01:0,39,881	0/0:34,0:34:87.20:0,87,2185	0/0:28,0:28:72.20:0,72,2010	0/0:18,0:18:39.13:0,39,1103	0/0:21,0:21:54.16:0,54,1519	0/0:22,0:22:54.15:0,54,1601	0/0:21,0:21:57.15:0,57,1696	0/0:22,0:22:48.14:0,48,1291	0/0:28,0:27:72.19:0,72,1833	0/0:8,0:8:18.04:0,18,521
chr10	51716509	.	TATATATATATAA	T	681.15	PASS	AC=10;AF=0.217;AN=46;BaseQRankSum=4.858;DP=111;FS=0.000;HRun=0;HaplotypeScore=44.4079;InbreedingCoeff=0.5428;MQ=56.20;MQ0=0;MQRankSum=-2.886;QD=48.65;ReadPosRankSum=2.505;VQSLOD=2.9410;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:4,0:1:3.01:0,3,63	0/0:9,0:3:5.60:0,6,42	0/0:2,0:2:3.01:0,3,188	0/0:3,0:3:9.03:0,9,531	./.	0/0:27,0:27:81.27:0,81,3762	0/0:5,0:5:15.04:0,15,617	0/0:5,0:5:15.05:0,15,485	0/0:3,0:3:6.02:0,6,326	1/1:1,3:4:7.24:289,7,0	1/1:1,2:3:8.96:213,9,0	0/0:2,0:2:6.02:0,6,241	./.	./.	0/0:5,0:5:5.98:0,6,67	0/0:5,0:5:8.77:0,9,225	0/0:8,0:8:24.08:0,24,1212	0/0:2,0:2:6.01:0,6,135	0/0:4,0:4:12.03:0,12,452	1/1:1,1:2:3.01:97,3,0	1/1:1,1:2:3.01:97,3,0	1/1:3,0:3:5.85:116,6,0	0/0:1,0:1:3.01:0,3,173	0/0:1,0:1:3.01:0,3,53	0/0:6,0:6:15.03:0,15,511	0/0:3,0:3:9.03:0,9,424
chr10	51716519	.	TAA	T	176.96	PASS	AC=10;AF=0.192;AN=52;BaseQRankSum=5.658;DP=140;FS=1.157;HRun=4;HaplotypeScore=26.5866;InbreedingCoeff=0.5957;MQ=64.89;MQ0=0;MQRankSum=-3.973;QD=9.31;ReadPosRankSum=2.964;VQSLOD=-0.0142;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:4:6:0,6,52	0/0:2,0:2:6:0,6,54	0/0:5,0:4:5.23:0,5,62	0/0:6,0:1:2.99:0,3,23	0/0:4,0:4:12.02:0,12,137	0/0:5,0:5:15.03:0,15,203	./.	0/0:29,0:29:78.14:0,78,1062	0/0:6,0:6:18.02:0,18,209	0/0:4,0:4:12.02:0,12,143	0/0:5,0:5:11.98:0,12,132	1/1:4,0:4:11.94:104,12,0	1/1:4,0:4:12:107,12,0	0/0:2,0:2:6.01:0,6,84	0/0:2,0:2:6:0,6,52	./.	0/0:7,0:7:14.92:0,15,118	0/0:7,0:7:16.73:0,17,109	0/0:11,0:11:30.06:0,30,380	0/0:2,0:2:6:0,6,54	0/0:5,0:5:15.03:0,15,193	1/1:1,3:4:3:29,3,0	1/1:1,3:4:3:28,3,0	1/1:3,0:3:5.79:48,6,0	0/0:1,0:1:3.01:0,3,56	0/0:5,0:5:15.01:0,15,136	0/0:5,0:5:3.38:0,3,102	0/0:3,0:3:9.02:0,9,139
chr10	51716893	.	C	CAA	2152.72	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=4.706;DP=585;FS=6.161;HRun=8;HaplotypeScore=83.7076;InbreedingCoeff=0.9710;MQ=69.77;MQ0=9;MQRankSum=-1.506;QD=32.13;ReadPosRankSum=2.598;VQSLOD=3.7326;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:28.86:0,29,633	0/0:7,0:7:13.59:0,14,85	0/0:50,0:22:6.96:0,7,392	0/0:50,0:23:31.80:0,32,293	0/0:21,0:22:56.88:0,57,613	0/0:22,0:22:60.16:0,60,669	0/0:13,0:13:33.09:0,33,368	0/0:38,0:37:73.19:0,73,964	0/0:12,0:12:33.09:0,33,368	0/0:30,0:29:87.19:0,87,948	0/0:16,0:16:42.09:0,42,468	1/1:3,7:10:21.03:306,21,0	1/1:3,15:18:39.13:619,39,0	0/0:16,0:16:42.10:0,42,468	0/0:22,0:22:44.66:0,45,164	0/0:22,0:22:50.80:0,51,228	0/0:26,0:26:25.21:0,25,137	0/0:13,0:13:26.30:0,26,99	0/0:22,0:20:57.12:0,57,609	0/0:15,0:15:45.12:0,45,502	0/0:15,0:15:42.10:0,42,458	1/1:1,8:9:27.05:401,27,0	1/1:2,19:20:42.14:667,42,0	1/1:1,8:9:21.96:335,22,0	0/0:20,0:20:51.12:0,51,568	0/0:31,0:31:78.18:0,78,870	0/0:26,0:26:72.17:0,72,792	0/0:7,0:7:21.06:0,21,234
chr10	51716901	.	A	AC	2597.14	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-9.420;DP=598;FS=2.154;HRun=2;HaplotypeScore=73.9145;InbreedingCoeff=0.9883;MQ=68.89;MQ0=11;MQRankSum=-1.487;QD=28.23;ReadPosRankSum=3.525;VQSLOD=3.4320;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:46.55:0,47,722	1/1:3,5:8:11.97:142,12,0	0/0:55,1:25:29.06:0,29,445	0/0:49,0:21:34.36:0,34,332	0/0:20,0:20:60.03:0,60,700	0/0:21,0:21:60.17:0,60,717	0/0:11,0:11:30.08:0,30,357	0/0:40,0:40:99:0,103,1152	0/0:15,0:15:42.08:0,42,478	0/0:36,0:35:99:0,105,1236	0/0:17,0:17:48:0,48,548	0/0:8,0:8:19.63:0,20,95	0/0:16,0:16:38.53:0,39,181	0/0:15,0:15:45.13:0,45,542	1/1:0,20:20:54.18:746,54,0	1/1:4,18:22:29.49:680,29,0	1/1:2,25:27:40.40:727,40,0	1/1:2,13:15:36.08:475,36,0	0/0:24,0:22:63.02:0,63,711	0/0:15,0:15:45.14:0,45,555	0/0:16,0:16:42.09:0,42,471	0/0:9,0:9:24.16:0,24,110	0/0:19,0:18:40.88:0,41,184	0/0:10,0:10:20.45:0,20,111	0/0:18,0:18:54.16:0,54,656	0/0:31,0:31:88.87:0,89,1028	0/0:28,0:28:72.20:0,72,861	0/0:7,0:7:21.02:0,21,242
chr10	51717286	.	G	GATACACACACAC	1163.21	PASS	AB=0.895;AC=12;AF=0.214;AN=56;BaseQRankSum=5.524;DP=598;FS=0.000;HRun=0;HaplotypeScore=198.0345;InbreedingCoeff=0.5940;MQ=59.58;MQ0=4;MQRankSum=-3.162;QD=10.48;ReadPosRankSum=-2.279;VQSLOD=1.7732;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:45.41:0,45,1927	0/0:9,0:9:2.78:0,3,24	0/0:42,0:24:36.71:0,37,476	0/0:44,0:25:34.81:0,35,455	0/0:22,0:22:54.81:0,55,1296	0/0:20,0:20:45.14:0,45,1207	0/0:20,0:20:48.12:0,48,1183	0/0:25,0:25:39.09:0,39,739	0/0:15,0:15:30.10:0,30,830	0/0:27,0:27:66.18:0,66,1822	0/0:17,0:17:42.14:0,42,1137	1/1:12,0:12:6.01:106,6,0	1/1:13,1:14:20.95:378,21,0	0/0:17,0:17:48.13:0,48,1424	1/1:21,0:21:17.63:480,18,0	0/1:7,0:7:28.57:56,0,29	0/1:12,0:11:51.90:80,0,52	0/1:6,0:6:1.87:2,0,47	0/0:18,0:18:39.04:0,39,659	0/0:34,0:34:96.28:0,96,2724	0/0:39,0:39:99:0,105,3041	0/1:7,17:25:0:0,0,0	0/0:6,18:24:0.02:0,0,0	1/1:14,0:14:8.97:216,9,0	0/0:21,0:21:54.11:0,54,1387	0/0:20,0:20:57.19:0,57,1511	0/0:27,0:27:69.20:0,69,1835	0/0:12,0:12:36.02:0,36,695
chr10	51717294	.	C	CACACACACAT	1501.56	PASS	AB=0.911;AC=9;AF=0.161;AN=56;BaseQRankSum=5.920;DP=652;FS=0.840;HRun=0;HaplotypeScore=196.4492;InbreedingCoeff=0.3102;MQ=55.91;MQ0=5;MQRankSum=-4.385;QD=13.53;ReadPosRankSum=-0.727;VQSLOD=2.6905;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:83.36:0,83,1972	0/1:2,7:10:0.02:0,0,0	0/0:39,0:18:29.66:0,30,359	0/0:47,0:19:35.20:0,35,463	0/0:24,0:24:20.27:0,20,1238	0/0:24,0:24:57.02:0,57,1234	0/0:22,0:22:48.15:0,48,1147	0/0:23,0:23:50.46:0,50,827	0/0:14,0:14:33.09:0,33,823	0/0:28,0:28:75.19:0,75,1856	0/0:19,0:19:51.13:0,51,1121	0/1:14,0:14:16.16:118,0,16	0/1:20,0:20:54.60:276,0,55	0/0:18,0:18:45.15:0,45,1277	1/1:7,15:25:10.81:772,11,0	1/1:10,0:11:4.08:286,4,0	0/1:14,0:13:79.63:99,0,80	0/0:9,0:9:9.31:0,9,56	0/0:17,0:17:38.88:0,39,582	0/0:34,0:34:93.28:0,93,2523	0/0:45,0:45:99:0,120,2984	0/0:19,0:19:1.22:0,1,21	0/0:30,0:29:7.54:0,8,53	0/1:17,0:16:57.90:86,0,58	0/0:25,0:25:24.84:0,25,1299	0/0:26,0:25:69.22:0,69,1593	0/0:30,0:30:81.21:0,81,1828	0/0:13,0:13:39.09:0,39,849
chr10	51717298	.	C	CAT	153.04	PASS	AB=0.909;AC=4;AF=0.071;AN=56;BaseQRankSum=6.441;DP=660;FS=1.786;HRun=0;HaplotypeScore=112.0829;InbreedingCoeff=0.0213;MQ=56.14;MQ0=5;MQRankSum=-2.390;QD=2.01;ReadPosRankSum=0.153;VQSLOD=2.3972;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:63.85:0,64,1102	0/0:8,0:8:2.99:0,3,24	0/0:38,0:17:41.19:0,41,462	0/0:49,0:17:36.65:0,37,433	0/0:23,0:23:60.98:0,61,805	0/0:24,0:24:60.12:0,60,790	0/0:20,0:20:51.13:0,51,704	0/0:24,0:24:72.05:0,72,808	0/0:12,0:12:36.09:0,36,500	0/0:28,0:28:84.17:0,84,1139	0/0:19,0:19:54.12:0,54,738	0/1:6,8:14:27.98:28,0,52	0/1:20,0:20:12.02:162,0,12	0/0:19,0:19:54.14:0,54,757	0/1:25,0:25:15.97:59,0,16	0/0:15,0:14:14.32:0,14,156	0/0:14,0:13:1.88:0,2,65	0/0:10,0:10:14.80:0,15,97	0/0:20,0:18:45.82:0,46,562	0/0:35,0:35:99:0,99,1422	0/0:47,0:47:99:0,129,1772	0/0:18,0:18:0.89:0,1,2	0/0:28,0:27:11.75:0,12,93	0/1:17,0:16:9.11:9,0,92	0/0:25,0:25:63.10:0,63,814	0/0:28,0:27:78.18:0,78,1067	0/0:33,0:33:78.65:0,79,1153	0/0:14,0:14:39.09:0,39,545
chr10	51718186	.	C	CCAA	2460.51	PASS	AC=10;AF=0.192;AN=52;BaseQRankSum=11.152;DP=828;FS=2.619;HRun=0;HaplotypeScore=125.9442;InbreedingCoeff=0.9892;MQ=38.68;MQ0=157;MQRankSum=-9.816;QD=20.68;ReadPosRankSum=0.190;VQSLOD=3.3049;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:45:99:0,99,1813	0/0:14,0:9:15.05:0,15,280	./.	./.	0/0:30,0:21:45.11:0,45,803	0/0:36,0:26:57.16:0,57,996	0/0:25,0:19:21.07:0,21,391	0/0:39,0:27:75.21:0,75,1331	0/0:34,0:24:42.14:0,42,764	0/0:47,0:36:99:0,102,1890	0/0:38,0:26:71.83:0,72,1330	1/1:6,12:11:21.54:364,22,0	1/1:15,15:15:36.03:662,36,0	0/0:27,0:19:45.15:0,45,838	0/0:41,0:32:69.22:0,69,1254	0/0:36,0:24:54.06:0,54,982	0/0:28,0:15:36.11:0,36,640	0/0:34,0:16:24.08:0,24,431	0/0:18,0:10:24.08:0,24,447	0/0:32,0:29:69.24:0,69,1281	0/0:48,0:33:59.92:0,60,1099	1/1:12,12:14:28.51:505,29,0	1/1:6,21:22:39.76:773,40,0	1/1:11,8:10:17.66:328,18,0	0/0:29,0:21:51.14:0,51,897	0/0:37,0:28:84.29:0,84,1566	0/0:42,0:29:75.16:0,75,1391	0/0:20,0:8:18.06:0,18,325
chr10	51718189	.	T	TATA	3474.42	PASS	AC=10;AF=0.192;AN=52;BaseQRankSum=12.952;DP=856;FS=4.334;HRun=0;HaplotypeScore=132.6448;InbreedingCoeff=0.9901;MQ=38.75;MQ0=157;MQRankSum=-10.616;QD=25.55;ReadPosRankSum=-2.222;VQSLOD=3.1651;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:45:99:0,99,1809	0/0:13,0:9:15.05:0,15,276	./.	./.	0/0:29,0:22:45.15:0,45,835	0/0:35,0:25:60.21:0,60,1094	0/0:26,0:19:21.07:0,21,391	0/0:39,0:26:72.25:0,72,1338	0/0:32,0:22:42.09:0,42,713	0/0:50,0:38:99:0,111,1952	0/0:38,0:27:71.83:0,72,1341	1/1:8,12:13:33.11:541,33,0	1/1:22,15:21:28.19:786,28,0	0/0:26,0:18:42.14:0,42,783	0/0:41,0:32:69.19:0,69,1244	0/0:37,0:25:60.08:0,60,1099	0/0:31,0:18:40.02:0,40,713	0/0:33,0:15:24.08:0,24,432	0/0:16,0:9:24.08:0,24,448	0/0:34,0:31:75.21:0,75,1355	0/0:50,0:35:62.93:0,63,1155	1/1:13,12:15:41.87:668,42,0	1/1:10,22:26:68.97:1011,69,0	1/1:13,8:12:26.73:469,27,0	0/0:30,0:22:51.16:0,51,901	0/0:38,0:30:87.29:0,87,1576	0/0:45,0:32:78.16:0,78,1385	0/0:19,0:7:15.05:0,15,279
chr10	51718592	.	AG	A	2089.83	PASS	AB=0.933;AC=13;AF=0.232;AN=56;BaseQRankSum=5.917;DP=513;FS=2.639;HRun=10;HaplotypeScore=79.2301;InbreedingCoeff=0.8518;MQ=74.65;MQ0=0;MQRankSum=-1.050;QD=15.83;ReadPosRankSum=4.438;VQSLOD=4.2348;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,28:34:77.97:676,78,0	1/1:1,8:9:20.89:173,21,0	0/0:36,0:28:38.36:0,38,463	0/0:30,1:20:24.67:0,25,322	0/0:15,0:16:41.93:0,42,433	0/0:17,0:17:36.09:0,36,390	0/0:21,0:22:59.98:0,60,635	0/0:9,0:11:8.44:0,8,80	0/0:19,0:20:42.11:0,42,464	0/0:13,0:13:21.04:0,21,213	0/0:17,0:17:36.57:0,37,399	0/0:13,0:13:26.01:0,26,151	0/0:16,0:16:28.98:0,29,172	0/0:11,0:12:29.97:0,30,305	1/1:3,22:25:56.98:495,57,0	1/1:3,14:17:13.78:287,14,0	1/1:1,24:25:59.98:521,60,0	1/1:2,6:8:14.86:119,15,0	0/1:13,1:14:2.02:2,0,196	0/0:14,1:15:1.02:0,1,239	0/0:20,0:22:47.96:0,48,512	0/0:11,0:11:17.25:0,17,90	0/0:9,0:9:8.68:0,9,49	0/0:20,0:20:48.94:0,49,257	0/0:21,0:21:45.11:0,45,489	0/0:21,0:21:33.04:0,33,338	0/0:25,0:25:32.73:0,33,553	0/0:11,1:12:10.08:0,10,312
chr10	51718602	.	G	GA	1422.93	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-0.876;DP=474;FS=2.748;HRun=1;HaplotypeScore=82.0166;InbreedingCoeff=0.9274;MQ=74.72;MQ0=0;MQRankSum=-2.113;QD=24.12;ReadPosRankSum=-0.147;VQSLOD=3.5605;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:32:84.77:0,85,503	0/0:8,0:8:20.39:0,20,125	0/0:31,0:24:50.59:0,51,589	0/0:29,0:20:16.12:0,16,365	0/0:18,0:18:46.31:0,46,591	0/0:14,0:14:41.99:0,42,506	0/0:27,0:27:73.28:0,73,878	0/0:18,0:17:25.22:0,25,355	0/0:17,0:17:48.06:0,48,568	0/0:10,0:10:24.04:0,24,274	0/0:19,0:19:45.10:0,45,521	1/1:1,8:9:20.16:320,20,0	1/1:2,11:13:30.04:377,30,0	0/0:12,0:12:33.06:0,33,385	0/0:22,0:22:55.57:0,56,319	0/0:16,0:16:41.09:0,41,253	0/0:26,0:26:64.12:0,64,366	0/0:6,0:7:13.90:0,14,74	0/0:11,0:11:29.99:0,30,339	0/0:13,0:13:26.86:0,27,311	0/0:21,0:21:46.32:0,46,604	1/1:1,8:9:18.06:246,18,0	1/1:2,5:7:0.56:37,1,0	1/1:2,19:21:46.09:607,46,0	0/0:17,0:17:42.98:0,43,525	0/0:16,0:16:48.06:0,48,546	0/0:19,0:19:54.16:0,54,680	0/0:12,0:12:36.01:0,36,438
chr10	51718714	.	CG	C	2384.20	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=0.879;DP=473;FS=4.727;HRun=1;HaplotypeScore=73.6968;InbreedingCoeff=0.9926;MQ=81.99;MQ0=0;MQRankSum=-4.838;QD=36.68;ReadPosRankSum=2.353;VQSLOD=4.1933;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:78.27:0,78,1235	1/1:0,6:6:15.05:210,15,0	0/0:22,0:19:56.86:0,57,842	0/0:22,0:17:32.25:0,32,658	0/0:19,0:19:57.18:0,57,875	0/0:13,0:13:30.09:0,30,455	0/0:30,0:30:81.25:0,81,1262	0/0:13,0:13:39.13:0,39,623	0/0:21,0:21:54.18:0,54,857	0/0:19,0:19:54.18:0,54,842	0/0:13,0:13:39.13:0,39,621	0/0:15,0:15:45.15:0,45,717	0/0:14,0:14:42.14:0,42,669	0/0:14,0:14:36.10:0,36,541	1/1:0,23:23:66.22:922,66,0	1/1:0,9:9:24.08:336,24,0	1/1:1,19:20:60.20:839,60,0	1/1:0,7:7:18.06:252,18,0	0/0:10,0:10:30.10:0,30,476	0/0:17,0:17:51.17:0,51,814	0/0:29,0:29:78.25:0,78,1222	0/0:14,0:14:42.14:0,42,652	0/0:13,0:13:39.13:0,39,623	0/0:12,0:12:36.12:0,36,575	0/0:15,0:15:45.14:0,45,688	0/0:20,0:20:60.19:0,60,936	0/0:23,0:23:57:0,57,910	0/0:7,0:7:21.07:0,21,334
chr10	51718737	.	AC	A	6048	PASS	AB=0.967;AC=35;AF=0.625;AN=56;BaseQRankSum=-12.209;DP=499;FS=1.875;HRun=9;HaplotypeScore=75.1467;InbreedingCoeff=0.7665;MQ=87.66;MQ0=2;MQRankSum=-1.785;QD=17.33;ReadPosRankSum=2.545;VQSLOD=5.2628;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,28:33:69.04:630,69,0	0/1:5,0:5:5.81:6,0,39	0/0:44,1:32:23.26:0,23,450	0/1:23,3:15:32.18:32,0,66	1/1:0,16:16:41.87:363,42,0	1/1:0,16:16:39.02:357,39,0	1/1:5,23:28:57.02:521,57,0	1/1:6,14:20:28.87:340,29,0	1/1:2,18:20:41.85:384,42,0	1/1:2,13:15:38.99:348,39,0	1/1:2,13:15:41.79:355,42,0	0/0:14,0:14:17.71:0,18,283	0/0:13,0:13:30.08:0,30,335	1/1:1,14:15:35.82:315,36,0	0/1:24,0:24:11.43:11,0,138	0/0:10,0:10:16.76:0,17,75	0/0:19,0:19:54.12:0,54,598	0/0:6,0:6:12.04:0,12,139	1/1:5,4:9:17.99:158,18,0	1/1:1,16:17:50.92:446,51,0	1/1:3,24:27:45.02:412,45,0	0/0:16,0:16:20.11:0,20,266	0/0:14,0:14:19.79:0,20,316	0/0:13,0:13:16.82:0,17,298	1/1:1,14:15:42.02:384,42,0	1/1:2,16:18:47.90:412,48,0	1/1:3,23:26:57.02:519,57,0	1/1:0,3:3:6:55,6,0
chr10	51720225	.	A	ACAC	228.57	PASS	AB=0.958;AC=16;AF=0.308;AN=52;BaseQRankSum=1.950;DP=463;FS=3.858;HRun=0;HaplotypeScore=130.3851;InbreedingCoeff=0.1645;MQ=29.35;MQ0=12;MQRankSum=-1.436;QD=1.07;ReadPosRankSum=0.329;VQSLOD=2.3921;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:9:4.56:0,5,31	0/0:10,0:10:6.43:0,6,48	./.	./.	0/0:21,0:21:1.58:0,2,8	0/0:14,0:11:4.45:0,4,38	1/1:19,0:16:0.61:1,1,0	0/0:18,0:15:34.91:0,35,363	0/0:20,0:19:7.22:0,7,86	0/1:42,0:41:78.75:79,0,605	0/0:16,0:16:1.76:0,2,6	1/1:16,1:17:6.38:80,6,0	1/1:11,2:14:8.26:98,8,0	1/1:18,0:18:0.26:1,0,0	1/1:12,0:11:4.03:16,4,0	0/0:14,0:14:8.97:0,9,97	0/1:14,0:13:29.92:30,0,65	0/0:10,0:9:9.04:0,9,120	0/0:14,0:13:22.44:0,22,205	0/0:15,0:14:3.25:0,3,11	0/0:16,0:14:12.02:0,12,150	0/0:24,0:26:2.90:0,3,12	0/0:21,5:25:4.93:0,5,12	0/1:7,1:9:6.32:6,0,18	0/1:21,0:21:13.26:13,0,85	0/1:32,0:30:36.59:37,0,495	0/1:14,0:14:1.66:2,0,152	0/0:10,0:9:21.06:0,21,259
chr10	51720997	.	CA	C	2567.67	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=12.129;DP=556;FS=4.979;HRun=1;HaplotypeScore=77.9349;InbreedingCoeff=0.8544;MQ=76.87;MQ0=0;MQRankSum=-1.978;QD=13.10;ReadPosRankSum=0.738;VQSLOD=2.5684;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:44,0:44:34.31:34,0,243	1/1:6,0:6:3.92:56,4,0	0/0:22,0:21:0.73:0,1,551	0/0:20,0:19:39.46:0,39,511	0/0:21,0:21:49.29:0,49,783	0/0:19,0:19:52.56:0,53,798	0/0:29,0:29:73.45:0,73,974	0/0:18,0:18:32.97:0,33,427	0/0:25,0:25:75.15:0,75,1084	0/0:17,0:17:47.99:0,48,571	0/0:21,0:21:62.93:0,63,782	1/1:0,12:12:21.07:283,21,0	1/1:7,12:19:45.12:579,45,0	0/0:26,0:26:75.20:0,75,1061	1/1:12,0:15:13.72:169,14,0	1/1:15,0:21:10.38:144,10,0	1/1:17,0:19:20.45:190,20,0	1/1:12,0:15:24.94:139,25,0	0/0:18,0:18:51.08:0,51,663	0/0:28,0:28:77.90:0,78,930	0/0:20,0:20:60.14:0,60,854	1/1:1,13:14:21.07:290,21,0	1/1:2,13:15:23.90:317,24,0	1/1:0,16:16:42.14:576,42,0	0/0:21,0:21:54.86:0,55,739	0/0:22,0:22:66.16:0,66,903	0/0:26,0:26:73.62:0,74,1104	0/0:7,0:7:21.01:0,21,257
chr10	51720998	.	AG	A	1394.77	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=6.169;DP=560;FS=3.876;HRun=9;HaplotypeScore=85.9894;InbreedingCoeff=0.8491;MQ=76.60;MQ0=0;MQRankSum=-4.277;QD=11.34;ReadPosRankSum=3.437;VQSLOD=3.1275;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:16,28:44:83.98:768,84,0	0/0:6,0:6:8.57:0,9,64	0/0:22,0:21:10.77:0,11,324	0/0:20,0:19:35.73:0,36,348	0/0:20,1:21:17.73:0,18,457	0/0:18,1:19:23.68:0,24,524	0/0:26,1:27:29.66:0,30,569	0/0:18,0:18:21.51:0,22,224	0/0:25,0:25:66.18:0,66,751	0/0:18,0:18:21.06:0,21,242	0/0:21,0:21:42.12:0,42,476	1/1:14,0:14:20.40:122,20,0	0/1:18,0:18:23.75:184,0,24	0/0:26,0:26:66.20:0,66,759	0/0:14,0:14:26.78:0,27,171	0/0:23,0:23:59.86:0,60,370	0/0:21,0:21:22.16:0,22,153	0/0:15,0:15:26.93:0,27,137	0/0:17,0:17:33.10:0,33,381	0/0:28,0:28:40:0,40,452	0/0:19,0:19:51.12:0,51,567	1/1:14,0:14:20.31:113,20,0	1/1:15,0:15:23.33:140,23,0	1/1:18,0:18:27.04:245,27,0	0/0:21,1:22:11.65:0,12,388	0/0:22,0:22:45.13:0,45,519	0/0:25,1:26:41.68:0,42,718	0/0:6,0:7:14.88:0,15,153
chr10	51721199	.	CTGTT	C	9109.21	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=15.439;DP=649;FS=2.338;HRun=0;HaplotypeScore=109.4979;InbreedingCoeff=0.9843;MQ=93.76;MQ0=1;MQRankSum=-6.207;QD=43.38;ReadPosRankSum=4.594;VQSLOD=5.1882;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,111,2839	1/1:0,10:10:30.03:530,30,0	0/0:38,0:38:99:0,105,2577	0/0:21,0:21:60.20:0,60,1441	0/0:30,0:30:90.31:0,90,2363	0/0:18,0:18:54.16:0,54,1400	0/0:22,0:22:66.23:0,66,1743	0/0:31,0:31:81.27:0,81,2083	0/0:19,0:19:57.19:0,57,1456	0/0:32,0:32:93.32:0,93,2480	0/0:23,0:23:63.22:0,63,1682	1/1:0,17:17:44.98:774,45,0	1/1:1,29:30:65.91:1193,66,0	0/0:17,0:17:51.18:0,51,1374	1/1:1,23:24:60.14:1100,60,0	1/1:2,21:23:57.06:1003,57,0	1/1:1,17:18:39.05:700,39,0	1/1:0,15:15:30.10:569,30,0	0/0:26,0:26:78.27:0,78,2037	0/0:21,0:21:57.20:0,57,1508	0/0:28,0:28:84.28:0,84,2178	1/1:2,27:28:66.07:1173,66,0	1/1:1,23:24:63.60:1155,64,0	1/1:2,18:20:48.59:912,49,0	0/0:22,0:22:63.22:0,63,1679	0/0:20,0:20:57.20:0,57,1516	0/0:29,0:29:84.28:0,84,2165	0/0:2,0:2:6.02:0,6,162
chr10	51721747	.	GTTACCGTCAC	G	8268.11	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=14.166;DP=711;FS=3.856;HRun=0;HaplotypeScore=215.2910;InbreedingCoeff=0.9966;MQ=87.79;MQ0=0;MQRankSum=-14.674;QD=79.50;ReadPosRankSum=1.186;VQSLOD=4.9052;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,148,7446	1/1:1,9:10:24.08:800,24,0	0/0:31,0:31:81.26:0,81,3762	0/0:24,0:24:66.01:0,66,2837	0/0:35,0:35:99:0,105,5457	0/0:20,0:20:57.18:0,57,2822	0/0:18,0:18:51.17:0,51,2695	0/0:31,0:31:84.28:0,84,3968	0/0:31,0:31:93.32:0,93,4789	0/0:22,0:22:66.23:0,66,3444	0/0:21,0:21:63.22:0,63,3201	0/0:20,0:20:60.21:0,60,3059	0/0:25,0:25:75.26:0,75,3905	0/0:31,0:31:93.32:0,93,4726	1/1:4,33:37:93.32:3052,93,0	1/1:0,24:24:66.23:2199,66,0	1/1:2,17:19:48.16:1518,48,0	1/1:6,8:14:21.07:700,21,0	0/0:19,0:18:48.16:0,48,2185	0/0:24,0:24:72.25:0,72,3617	0/0:32,0:32:90.24:0,90,4124	0/0:30,0:30:87.28:0,87,4505	0/0:10,0:10:30.10:0,30,1595	0/0:33,0:33:96.31:0,96,4976	0/0:31,0:31:93.32:0,93,4773	0/0:32,0:32:96.33:0,96,4986	0/0:31,0:30:93.30:0,93,4701	0/0:6,0:6:18.06:0,18,958
chr10	51725198	.	GA	G	385.70	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=1.321;DP=558;FS=2.352;HRun=1;HaplotypeScore=89.3470;InbreedingCoeff=0.9650;MQ=70.46;MQ0=1;MQRankSum=-0.730;QD=27.55;ReadPosRankSum=1.899;VQSLOD=3.6600;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,13:14:11.93:472,12,0	0/0:11,0:11:33.11:0,33,523	0/0:13,0:12:30.06:0,30,368	0/0:14,0:13:26.37:0,26,417	0/0:27,0:27:81.24:0,81,1223	0/0:20,0:20:60.18:0,60,910	0/0:21,0:21:63.21:0,63,996	0/0:32,0:32:93.19:0,93,1272	0/0:15,0:15:42.14:0,42,663	0/0:23,0:23:69.07:0,69,971	0/0:14,0:14:42.13:0,42,634	0/0:15,0:15:42.13:0,42,642	0/0:22,0:22:63.19:0,63,957	0/0:22,0:22:63:0,63,866	0/0:16,0:16:45.12:0,45,665	0/0:25,0:25:72.20:0,72,1075	0/0:10,0:10:30.02:0,30,419	0/0:24,0:24:66.17:0,66,991	0/0:22,0:22:63.18:0,63,930	0/0:31,0:31:93.04:0,93,1308	0/0:13,0:13:39.11:0,39,587	0/0:24,0:24:68.75:0,69,952	0/0:22,0:22:63.06:0,63,915	0/0:12,0:12:36.05:0,36,496	0/0:18,0:18:54.15:0,54,805	0/0:22,0:22:66.21:0,66,997	0/0:32,0:32:95.95:0,96,1405	0/0:24,0:24:72.14:0,72,1041
chr10	51725217	.	C	CT	5242.72	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=2.301;DP=577;FS=0.000;HRun=8;HaplotypeScore=72.5699;InbreedingCoeff=0.9942;MQ=71.02;MQ0=1;MQRankSum=-2.049;QD=28.65;ReadPosRankSum=2.543;VQSLOD=4.9712;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:44.99:0,45,405	1/1:2,10:12:30.09:346,30,0	0/0:15,0:13:11.12:0,11,222	0/0:16,0:15:35.95:0,36,320	0/0:29,0:29:78.02:0,78,708	0/0:19,0:19:51.03:0,51,467	0/0:21,0:21:54.01:0,54,490	0/0:30,0:30:66:0,66,598	0/0:14,0:14:39.01:0,39,357	0/0:26,0:26:65.54:0,66,603	0/0:17,0:17:51.01:0,51,462	1/1:1,12:13:36.11:416,36,0	1/1:2,18:21:57.17:657,57,0	0/0:20,0:20:53.75:0,54,494	1/1:2,16:18:38.98:430,39,0	1/1:3,20:23:60.18:692,60,0	1/1:3,9:12:30.09:346,30,0	1/1:5,19:24:54.16:623,54,0	0/0:21,0:21:41.65:0,42,406	0/0:37,0:37:96.03:0,96,878	0/0:15,0:15:42.02:0,42,384	1/1:1,23:24:66.20:762,66,0	1/1:5,17:22:48.14:554,48,0	1/1:1,13:14:36.11:415,36,0	0/0:20,0:20:54.02:0,54,494	0/0:25,0:25:60.03:0,60,549	0/0:31,0:31:78.03:0,78,714	0/0:20,0:20:57.03:0,57,522
chr10	51726348	.	A	AC	3216.63	PASS	AB=0.544;AC=18;AF=0.346;AN=52;BaseQRankSum=-3.928;DP=466;FS=0.000;HRun=5;HaplotypeScore=37.8892;InbreedingCoeff=0.7948;MQ=48.59;MQ0=50;MQRankSum=-1.434;QD=21.02;ReadPosRankSum=1.294;VQSLOD=2.4113;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:27:33.08:0,33,355	1/1:1,2:3:6.02:79,6,0	./.	./.	0/0:5,0:4:9.02:0,9,97	0/0:31,0:31:66.16:0,66,709	0/0:27,0:22:45.11:0,45,478	0/0:37,0:14:33.08:0,33,354	0/0:20,0:20:42.10:0,42,449	0/0:16,0:16:36.09:0,36,387	0/0:8,0:8:21.05:0,21,225	1/1:1,20:18:39.12:502,39,0	0/1:2,11:13:11.19:215,0,11	0/0:26,0:26:66.17:0,66,709	1/1:2,17:17:36.12:473,36,0	0/1:2,10:12:5.16:289,0,5	1/1:1,21:21:27.09:355,27,0	1/1:2,20:19:45.15:592,45,0	0/0:18,0:13:36.06:0,36,376	0/0:6,0:6:14.96:0,15,139	0/0:20,0:18:36.09:0,36,385	1/1:0,6:5:6.02:79,6,0	1/1:1,9:9:21.07:274,21,0	1/1:4,21:24:42.14:552,42,0	0/0:4,0:4:12.03:0,12,129	0/0:15,0:15:36.09:0,36,387	0/0:20,0:20:57.14:0,57,612	0/0:4,0:4:9.02:0,9,97
chr10	51726737	.	A	AAAACAAAC	8061.39	PASS	AC=20;AF=0.370;AN=54;BaseQRankSum=3.951;DP=449;FS=0.715;HRun=0;HaplotypeScore=117.7334;InbreedingCoeff=0.9720;MQ=54.64;MQ0=2;MQRankSum=-10.690;QD=52.35;ReadPosRankSum=-3.594;VQSLOD=4.0804;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,0:26:47.98:447,48,0	./.	0/0:19,0:16:14.05:0,14,277	0/0:12,0:10:18:0,18,407	0/0:19,0:19:42.13:0,42,1023	0/0:12,0:12:15.05:0,15,384	0/0:16,0:16:33.11:0,33,818	0/0:24,0:24:42.14:0,42,977	0/0:27,0:27:75.26:0,75,1895	0/0:20,0:20:39.12:0,39,947	0/0:13,0:13:33.11:0,33,845	1/1:7,7:14:33.11:1127,33,0	1/1:6,8:17:42.62:1641,43,0	0/0:17,0:17:48.16:0,48,1152	1/1:5,0:14:21.07:733,21,0	1/1:11,0:16:27.09:898,27,0	1/1:14,0:14:16.30:421,16,0	1/1:10,0:10:6.49:172,6,0	0/0:13,0:13:18.06:0,18,459	0/0:16,0:16:39.13:0,39,998	0/0:18,0:18:39.13:0,39,956	1/1:10,5:15:27.09:973,27,0	1/1:6,7:13:27.09:1071,27,0	1/1:9,4:15:15.05:578,15,0	0/0:18,0:18:39.13:0,39,998	0/0:18,0:18:48.16:0,48,1229	0/0:15,0:15:42.14:0,42,1075	0/0:18,0:17:45.15:0,45,1130
chr10	51727091	.	T	TA	1937.34	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=-8.405;DP=629;FS=7.992;HRun=10;HaplotypeScore=94.0806;InbreedingCoeff=0.8930;MQ=74.22;MQ0=8;MQRankSum=0.151;QD=15.25;ReadPosRankSum=-0.354;VQSLOD=3.3229;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:32.89:0,33,264	0/0:4,0:4:8.03:0,8,55	0/0:43,0:29:24.71:0,25,226	0/1:27,0:19:2.48:2,0,96	0/0:29,1:30:48.86:0,49,598	0/0:23,0:23:59.91:0,60,493	0/0:14,0:14:38.95:0,39,320	0/0:26,0:26:56.90:0,57,466	0/0:24,0:24:59.82:0,60,478	1/1:11,23:35:72.71:719,73,0	1/1:4,18:22:42.11:447,42,0	0/0:22,0:21:47.92:0,48,391	0/0:20,0:20:44.93:0,45,366	0/0:14,0:14:35.95:0,36,296	0/0:23,0:23:46.07:0,46,363	0/0:15,0:15:29.95:0,30,246	0/0:34,0:33:67.83:0,68,532	0/0:20,0:19:41.86:0,42,331	0/0:13,0:13:26.94:0,27,217	0/0:33,0:34:88.84:0,89,707	0/0:21,0:22:49.95:0,50,400	0/0:23,0:23:56.72:0,57,456	0/0:20,0:19:38.87:0,39,316	0/0:18,0:18:41.91:0,42,341	0/0:21,0:21:56.89:0,57,463	1/1:8,23:32:28.92:705,29,0	0/0:21,0:21:42.39:0,42,342	1/1:1,9:10:21.05:224,21,0
chr10	51727109	.	TTG	T	1320.34	PASS	AB=0.864;AC=20;AF=0.370;AN=54;BaseQRankSum=5.370;DP=633;FS=0.000;HRun=0;HaplotypeScore=96.4549;InbreedingCoeff=0.2852;MQ=62.65;MQ0=12;MQRankSum=-0.285;QD=4.62;ReadPosRankSum=1.331;VQSLOD=1.9461;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:20:14.99:0,15,129	1/1:0,0:4:11.36:56,11,0	./.	0/0:20,0:9:3.01:0,3,41	0/1:25,3:28:90.81:91,0,368	0/0:22,1:23:2.48:0,2,378	0/0:18,1:19:5.70:0,6,469	0/0:23,0:23:15.04:0,15,206	0/1:26,1:28:16.91:17,0,509	0/1:32,2:34:33.68:34,0,342	0/0:26,1:27:8.74:0,9,526	1/1:13,2:15:11.85:105,12,0	0/1:11,8:19:19.26:210,0,19	0/1:20,0:20:0.33:0,0,369	1/1:8,0:15:14.04:70,14,0	1/1:6,0:14:14.20:70,14,0	0/0:19,0:42:53.94:0,54,461	0/0:12,0:23:9.90:0,10,182	0/0:16,0:14:12.04:0,12,182	0/0:30,0:31:51.15:0,51,729	0/0:26,0:26:1.15:0,1,393	1/1:16,5:21:12.07:93,12,0	0/1:11,8:19:21.54:177,0,22	1/1:7,18:27:47.63:495,48,0	0/1:21,1:22:3.32:3,0,334	0/0:31,0:31:30.96:0,31,576	0/1:13,5:18:76.05:76,0,184	0/0:12,0:12:18.04:0,18,240
chr10	51728430	.	C	CT	841.25	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-7.353;DP=528;FS=7.850;HRun=6;HaplotypeScore=49.1635;InbreedingCoeff=0.9315;MQ=76.98;MQ0=0;MQRankSum=-3.394;QD=22.74;ReadPosRankSum=1.546;VQSLOD=2.4649;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:78.18:0,78,796	1/1:0,8:8:18.06:226,18,0	0/0:20,0:20:53.94:0,54,508	0/0:12,0:12:9.07:0,9,165	0/0:27,0:27:75.14:0,75,753	0/0:19,0:19:51.10:0,51,513	0/0:9,0:9:18.04:0,18,184	0/0:38,0:38:99:0,105,1042	0/0:13,0:13:39.09:0,39,398	0/0:33,0:33:78.15:0,78,782	0/0:24,0:24:63.13:0,63,637	0/0:15,0:15:45.05:0,45,446	0/0:22,0:22:57.08:0,57,562	0/0:11,0:11:27.06:0,27,275	1/1:2,16:18:42.13:528,42,0	1/1:1,10:11:18.06:226,18,0	0/0:18,0:18:48.08:0,48,476	0/0:3,0:3:6.01:0,6,61	0/0:16,0:16:48.11:0,48,490	0/0:33,0:33:93.16:0,93,928	0/0:6,0:6:18.04:0,18,184	0/0:16,0:16:45.07:0,45,446	0/0:32,0:32:90.09:0,90,886	0/0:10,0:10:27.06:0,27,275	0/0:25,0:25:66.14:0,66,667	0/0:18,0:18:51.10:0,51,516	0/0:33,0:33:84.15:0,84,838	0/0:8,0:8:20.99:0,21,195
chr10	51730031	.	GA	G	7166.54	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=15.110;DP=748;FS=0.291;HRun=7;HaplotypeScore=75.8741;InbreedingCoeff=0.9997;MQ=77.63;MQ0=0;MQRankSum=-1.319;QD=26.74;ReadPosRankSum=3.348;VQSLOD=5.5000;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,132,1645	1/1:1,16:17:45.10:459,45,0	0/0:22,1:23:48.13:0,48,564	0/0:10,0:10:27.04:0,27,322	0/0:26,0:26:72.22:0,72,892	0/0:30,0:30:90.29:0,90,1132	0/0:28,0:28:75.21:0,75,916	0/0:27,0:27:66.20:0,66,817	0/0:19,0:19:57.15:0,57,700	0/0:26,0:26:63.19:0,63,778	0/0:24,0:24:60.18:0,60,744	1/1:1,21:22:60.13:612,60,0	1/1:2,19:21:51.06:508,51,0	0/0:29,0:29:81.26:0,81,1019	1/1:2,26:28:78.18:796,78,0	1/1:2,37:39:99:997,99,0	1/1:1,38:39:99:1102,108,0	1/1:2,14:16:36.08:367,36,0	0/0:21,0:21:54.17:0,54,668	0/0:31,0:31:90.25:0,90,1115	0/0:30,0:30:87.24:0,87,1055	1/1:0,33:33:93.21:948,93,0	1/1:3,21:24:60.13:612,60,0	1/1:3,26:29:75.17:765,75,0	0/0:35,0:35:84.25:0,84,1043	0/0:28,0:28:75.22:0,75,908	0/0:36,0:35:99:0,102,1283	0/0:9,0:9:27.09:0,27,340
chr10	51730163	.	GC	G	3221.02	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=20.435;DP=765;FS=2.512;HRun=1;HaplotypeScore=145.4587;InbreedingCoeff=0.9793;MQ=79.57;MQ0=0;MQRankSum=-9.917;QD=11.63;ReadPosRankSum=6.780;VQSLOD=2.1781;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,132,2035	1/1:1,8:9:24:213,24,0	0/0:26,0:26:73.56:0,74,1137	0/0:19,0:19:56.81:0,57,750	0/0:21,0:21:53.38:0,53,784	0/0:23,0:23:60.14:0,60,924	0/0:38,0:38:99:0,114,1748	0/0:40,0:40:99:0,120,1749	0/0:28,0:28:84.23:0,84,1278	0/0:26,0:26:72.15:0,72,1043	0/0:22,0:22:63.18:0,63,958	1/1:27,0:27:36.71:259,37,0	1/1:26,1:27:57.27:308,57,0	0/0:32,0:32:93.30:0,93,1455	1/1:5,26:31:77.97:679,78,0	1/1:7,31:37:93.04:852,93,0	1/1:33,0:33:63.54:305,64,0	1/1:23,0:23:5.30:151,5,0	0/0:13,0:13:39.13:0,39,622	0/0:27,0:27:78.22:0,78,1151	0/0:42,0:42:99:0,126,1948	1/1:26,0:26:17.82:186,18,0	1/1:29,0:29:29.41:247,29,0	1/1:34,0:34:49.29:239,49,0	0/0:26,0:26:78.24:0,78,1198	0/0:28,0:28:84.25:0,84,1270	0/0:25,0:25:75.24:0,75,1167	0/0:7,0:7:18.06:0,18,287
chr10	51730164	.	CG	C	6451.47	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=20.199;DP=765;FS=7.302;HRun=3;HaplotypeScore=133.6269;InbreedingCoeff=0.9991;MQ=79.55;MQ0=0;MQRankSum=-10.723;QD=23.37;ReadPosRankSum=6.305;VQSLOD=3.6511;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,132,1836	1/1:9,0:9:24:213,24,0	0/0:26,0:26:71.60:0,72,967	0/0:19,0:19:46.94:0,47,591	0/0:22,0:22:57.12:0,57,727	0/0:23,0:23:60.17:0,60,826	0/0:37,0:37:99:0,111,1576	0/0:37,0:37:99:0,105,1475	0/0:28,0:28:78.26:0,78,1122	0/0:26,0:26:66.18:0,66,884	0/0:21,0:21:57.19:0,57,820	1/1:19,8:27:67.57:777,68,0	1/1:18,9:27:75.11:798,75,0	0/0:34,0:34:99:0,99,1372	1/1:31,0:31:77.97:679,78,0	1/1:37,0:36:93.04:852,93,0	1/1:22,11:33:72.05:767,72,0	1/1:16,7:23:45.13:525,45,0	0/0:14,0:14:42.13:0,42,588	0/0:28,0:28:75.18:0,75,1000	0/0:42,0:42:99:0,123,1731	1/1:11,15:26:62.88:572,63,0	1/1:14,15:29:68.85:663,69,0	1/1:22,12:34:53.58:605,54,0	0/0:26,0:26:75.24:0,75,1062	0/0:29,0:29:81.25:0,81,1130	0/0:25,0:25:75.22:0,75,1040	0/0:7,0:7:21.03:0,21,279
chr10	51730170	.	C	CT	9043.30	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=20.599;DP=756;FS=16.021;HRun=0;HaplotypeScore=128.6574;InbreedingCoeff=0.9991;MQ=80.80;MQ0=0;MQRankSum=-10.714;QD=31.84;ReadPosRankSum=3.748;VQSLOD=3.3512;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,129,1785	1/1:0,10:10:24.07:297,24,0	0/0:28,0:28:81.19:0,81,1051	0/0:18,0:18:51.14:0,51,657	0/0:20,0:20:51.15:0,51,680	0/0:24,0:24:60.18:0,60,821	0/0:37,0:37:99:0,108,1508	0/0:33,0:33:99:0,99,1354	0/0:28,0:28:84.28:0,84,1170	0/0:22,0:22:63.19:0,63,850	0/0:20,0:20:60.20:0,60,833	1/1:19,10:29:79.06:1045,79,0	1/1:15,13:28:84.23:1115,84,0	0/0:35,0:35:99:0,105,1434	1/1:0,31:31:93.28:1152,93,0	1/1:1,32:33:96.29:1174,96,0	1/1:24,14:38:87.24:1159,87,0	1/1:17,7:24:51.13:704,51,0	0/0:15,0:15:45.11:0,45,607	0/0:25,0:25:69.20:0,69,915	0/0:43,0:43:99:0,126,1739	1/1:8,17:25:66.18:801,66,0	1/1:14,16:30:69.18:848,69,0	1/1:23,12:35:57.13:748,57,0	0/0:24,0:24:72.22:0,72,983	0/0:25,0:25:75.24:0,75,1033	0/0:25,0:25:75.25:0,75,1045	0/0:7,0:7:21.07:0,21,293
chr10	51731373	.	C	CCT	1896.23	PASS	AB=0.871;AC=31;AF=0.554;AN=56;BaseQRankSum=-4.231;DP=724;FS=5.628;HRun=0;HaplotypeScore=133.4781;InbreedingCoeff=0.4844;MQ=65.93;MQ0=15;MQRankSum=1.167;QD=3.89;ReadPosRankSum=-1.988;VQSLOD=2.0915;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:19:2.80:13,3,0	1/1:12,0:12:3.36:44,3,0	0/1:31,0:21:0.82:1,0,25	0/1:41,0:17:0:0,0,0	1/1:11,16:27:21.07:320,21,0	0/0:13,0:29:25.57:0,26,125	0/0:18,0:40:26.64:0,27,136	1/1:29,11:40:31.62:315,32,0	0/0:22,0:23:18.52:0,19,361	0/0:32,0:33:38.40:0,38,305	0/0:21,0:19:21:0,21,219	1/1:26,0:26:5.45:46,5,0	1/1:29,0:29:10.74:95,11,0	0/0:20,0:21:29.63:0,30,284	1/1:29,0:29:3.67:25,4,0	0/1:22,0:21:13.51:84,0,14	1/1:25,0:26:10.35:95,10,0	1/1:18,0:18:12.30:96,12,0	0/1:11,7:18:39.92:215,0,40	1/1:11,10:21:16.84:219,17,0	0/1:20,16:36:21.52:249,0,22	1/1:27,0:27:8.99:80,9,0	0/1:29,0:29:0.33:0,0,0	1/1:12,0:12:2.99:24,3,0	0/0:21,0:21:26.90:0,27,273	0/0:30,0:32:8.27:0,8,243	0/1:12,10:22:79.75:162,0,80	0/0:15,0:14:25.88:0,26,272
chr10	51732828	.	A	ATGTG	192.10	PASS	AB=0.941;AC=11;AF=0.229;AN=48;BaseQRankSum=0.933;DP=617;FS=2.143;HRun=0;HaplotypeScore=130.9436;InbreedingCoeff=0.1895;MQ=74.05;MQ0=9;MQRankSum=-0.758;QD=0.87;ReadPosRankSum=-4.612;VQSLOD=0.2953;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:24,8:35:5.74:137,6,0	./.	./.	./.	0/0:13,0:15:6:0,6,56	0/0:12,0:13:15.04:0,15,211	0/1:27,0:29:76.93:77,0,145	1/1:32,0:31:2.29:6,2,0	0/1:20,0:25:1.05:1,0,193	0/1:19,0:19:0.37:0,0,40	./.	0/0:23,0:22:2.69:0,3,37	0/0:17,0:16:1.56:0,2,5	0/0:27,0:27:18.01:0,18,229	0/0:28,0:28:9.24:0,9,84	0/0:20,0:20:9.02:0,9,101	0/0:29,0:29:26.66:0,27,245	0/0:10,0:10:9.01:0,9,83	0/0:20,0:21:3:0,3,28	0/0:8,0:9:3:0,3,28	0/0:55,0:54:12.59:0,13,162	0/0:8,0:8:5.30:0,5,47	1/1:12,0:11:7.69:29,8,0	0/1:53,0:53:53.72:55,0,54	0/1:10,0:14:6.55:7,0,40	0/0:16,0:15:5.04:0,5,68	0/0:19,0:20:12.03:0,12,165	0/0:8,0:9:5.90:0,6,74
chr10	51732876	.	GTGT	G	488.49	PASS	AB=0.952;AC=8;AF=0.143;AN=56;BaseQRankSum=4.196;DP=667;FS=19.107;HRun=0;HaplotypeScore=87.7462;InbreedingCoeff=0.3163;MQ=58.95;MQ0=75;MQRankSum=-0.447;QD=4.40;ReadPosRankSum=-0.019;VQSLOD=0.3729;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:34:50.40:0,50,553	1/1:5,0:2:6.02:77,6,0	0/0:41,0:15:41.49:0,41,427	0/0:33,0:10:24.07:0,24,225	0/0:17,0:17:50.74:0,51,654	0/0:21,0:20:56.94:0,57,870	0/0:38,0:37:85.08:0,85,1260	0/0:19,0:19:57.07:0,57,697	0/0:27,0:26:62.37:0,62,883	0/0:28,0:27:79.50:0,80,1083	0/0:8,0:8:24.08:0,24,353	0/0:36,0:27:22.79:0,23,148	0/1:19,0:8:27.74:28,0,59	0/0:26,0:26:48.13:0,48,754	1/1:7,18:20:17.27:247,17,0	0/1:21,2:18:64.63:95,0,65	0/1:21,2:16:26.73:154,0,27	0/1:15,0:6:18.04:27,0,18	0/0:17,0:17:39.76:0,40,531	0/0:18,0:17:39.49:0,39,566	0/0:43,0:42:90.77:0,91,1423	0/0:20,0:14:3.96:0,4,24	0/0:21,0:16:14.79:0,15,92	0/0:43,1:39:1.23:0,1,282	0/0:18,0:18:45.14:0,45,652	0/0:16,0:16:36.50:0,37,487	0/0:19,0:18:45.56:0,46,747	0/0:10,0:10:28.69:0,29,367
chr10	51732878	.	GT	G	1209.09	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=6.514;DP=656;FS=5.269;HRun=2;HaplotypeScore=68.3949;InbreedingCoeff=0.8224;MQ=60.07;MQ0=73;MQRankSum=0.522;QD=5.26;ReadPosRankSum=2.881;VQSLOD=0.9667;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:34:47.87:0,48,500	1/1:2,3:2:6.02:77,6,0	0/0:42,0:16:44.03:0,44,466	0/0:33,0:10:20.62:0,21,214	0/0:17,0:17:50.34:0,50,622	0/0:21,0:20:56.73:0,57,731	0/0:35,0:35:89.80:0,90,1138	0/0:22,0:22:60.04:0,60,751	0/0:27,0:26:60.90:0,61,729	0/0:29,0:28:81.25:0,81,1054	0/0:8,0:8:24.08:0,24,322	1/1:31,3:25:17.06:138,17,0	1/1:6,13:8:7.38:81,7,0	0/0:24,0:24:45.09:0,45,572	1/1:24,0:19:14.36:82,14,0	0/1:25,0:19:32.99:68,0,33	1/1:6,16:15:35.08:395,35,0	1/1:4,11:6:1.26:141,1,0	0/0:18,0:18:47.46:0,47,563	0/0:18,0:17:47.69:0,48,577	0/0:39,0:38:87.76:0,88,1185	1/1:20,0:14:4.44:24,4,0	1/1:20,0:15:13.28:115,13,0	1/1:44,2:40:43.11:286,43,0	0/0:18,0:18:42.13:0,42,553	0/0:13,0:13:35.94:0,36,441	0/0:17,0:17:50.76:0,51,664	0/0:10,0:10:26.68:0,27,333
chr10	51732879	.	T	TG	1723.12	PASS	AB=0.535;AC=18;AF=0.321;AN=56;BaseQRankSum=1.034;DP=653;FS=3.411;HRun=1;HaplotypeScore=66.9130;InbreedingCoeff=0.8025;MQ=60.49;MQ0=73;MQRankSum=0.368;QD=7.46;ReadPosRankSum=2.506;VQSLOD=1.2016;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:30:21.97:0,22,453	1/1:4,2:3:6.02:77,6,0	0/0:42,0:16:43.90:0,44,468	0/0:33,0:10:17.60:0,18,211	0/0:17,0:17:51.13:0,51,649	0/0:21,0:20:57.13:0,57,731	0/0:35,0:35:89.71:0,90,1140	0/0:22,0:22:59.96:0,60,752	0/0:28,0:27:57.31:0,57,716	0/0:28,0:27:81.25:0,81,1057	0/0:8,0:8:24.08:0,24,318	1/1:3,29:23:23.25:324,23,0	1/1:14,4:7:9.01:125,9,0	0/0:23,0:23:45.11:0,45,571	1/1:20,5:20:8.02:23,8,0	0/1:4,21:19:31.48:42,0,31	1/1:19,2:14:16.79:159,17,0	1/1:12,3:6:12.27:70,12,0	0/0:19,0:19:47.54:0,48,579	0/0:19,0:18:48.08:0,48,589	0/0:37,0:36:87.28:0,87,1159	0/1:2,18:14:6:42,0,6	1/1:2,21:18:15.04:221,15,0	1/1:6,39:40:59.32:842,59,0	0/0:20,0:20:31.47:0,31,512	0/0:13,0:13:35.90:0,36,437	0/0:17,0:17:51.15:0,51,670	0/0:9,0:9:27.07:0,27,345
chr10	51733800	.	TTCTCTCTCTCTC	T	1080.49	PASS	AB=0.965;AC=18;AF=0.346;AN=52;BaseQRankSum=3.950;DP=666;FS=7.624;HRun=0;HaplotypeScore=235.8357;InbreedingCoeff=0.4500;MQ=63.59;MQ0=14;MQRankSum=-1.938;QD=4.16;ReadPosRankSum=0.303;VQSLOD=1.6381;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:25,2:27:10.33:229,10,0	1/1:10,0:11:1.72:4,2,0	./.	./.	0/0:16,0:15:8.73:0,9,286	0/1:20,0:20:3.15:3,0,266	0/0:29,0:29:8.66:0,9,185	0/0:31,0:31:9.03:0,9,128	0/0:29,0:28:33.57:0,34,1059	0/0:34,0:34:23.57:0,24,592	0/0:23,0:23:3:0,3,25	1/1:23,3:27:12.49:323,12,0	1/1:23,0:25:8.98:219,9,0	0/0:33,0:32:23.74:0,24,680	1/1:28,0:28:6.69:63,7,0	0/1:26,0:27:99:148,0,160	0/0:16,0:16:16.08:0,16,187	0/1:16,0:16:63.89:64,0,178	0/0:14,0:14:16.57:0,17,184	0/0:16,0:16:2.39:0,2,153	0/0:43,0:41:33.10:0,33,1122	1/1:17,5:24:7.22:131,7,0	1/1:11,4:14:4.31:51,4,0	0/0:33,0:29:0.39:0,0,0	0/0:17,0:17:9.03:0,9,258	0/1:34,0:34:6.60:7,0,936	0/0:22,0:22:30.57:0,31,1153	0/0:9,0:8:3.01:0,3,48
chr10	51733837	.	TCTCTCTCTCTCTCACACACACACA	T	1218.80	PASS	AB=1.000;AC=11;AF=0.212;AN=52;BaseQRankSum=4.084;DP=595;FS=18.104;HRun=0;HaplotypeScore=264.0124;InbreedingCoeff=0.4877;MQ=43.49;MQ0=43;MQRankSum=-0.539;QD=6.35;ReadPosRankSum=-0.849;VQSLOD=0.9333;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:26:99:187,0,1518	0/0:12,0:10:1.32:0,1,33	./.	./.	0/0:14,0:13:8.67:0,9,305	0/0:22,0:21:33.12:0,33,1384	0/0:16,0:15:24.74:0,25,889	0/0:17,0:16:22.10:0,22,322	0/0:27,0:25:57.65:0,58,3071	0/0:24,0:21:56.13:0,56,2008	0/0:16,0:15:12.03:0,12,450	1/1:17,0:15:15.50:382,16,0	1/1:8,13:21:11.95:384,12,0	0/0:28,0:26:40.44:0,40,1729	0/1:32,0:32:43.89:44,0,57	0/1:36,0:34:99:190,0,297	0/0:15,0:13:25.24:0,25,596	0/0:12,0:11:30.10:0,30,1112	0/0:17,0:16:33.10:0,33,1367	0/0:28,0:27:30.44:0,30,1470	0/0:39,0:32:51.80:0,52,2476	1/1:31,0:29:7.67:137,8,0	1/1:26,0:24:0.41:44,0,0	0/0:16,22:32:0:0,0,0	0/0:20,0:18:30.10:0,30,1530	0/0:28,0:27:77.62:0,78,3020	0/0:20,0:20:45.47:0,45,2431	0/0:6,0:5:15.05:0,15,682
chr10	51733843	.	TCTCTCTCACACACA	T	1453.69	PASS	AB=1.000;AC=21;AF=0.404;AN=52;BaseQRankSum=6.291;DP=559;FS=24.075;HRun=0;HaplotypeScore=193.0505;InbreedingCoeff=0.2887;MQ=43.76;MQ0=40;MQRankSum=0.299;QD=4.63;ReadPosRankSum=0.321;VQSLOD=1.3621;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:22:54.06:54,0,934	1/1:12,0:10:2.77:23,3,0	./.	./.	0/0:14,0:13:5.65:0,6,113	0/1:21,0:20:78.40:78,0,693	0/1:18,0:17:14.38:14,0,722	0/0:18,0:17:16.97:0,17,285	0/0:26,0:24:8.59:0,9,1414	0/0:20,0:17:33.11:0,33,828	0/0:14,0:13:12.04:0,12,333	1/1:15,0:13:12.48:160,12,0	1/1:20,0:20:9.03:175,9,0	0/0:24,0:22:27.97:0,28,803	1/1:6,23:29:3.45:97,3,0	1/1:38,0:36:22.74:455,23,0	0/1:15,0:13:15.06:255,0,15	0/1:12,0:11:99:196,0,245	0/1:17,0:16:60.30:60,0,585	0/1:26,0:25:1.91:2,0,824	0/0:38,0:32:22.35:0,22,1030	1/1:30,0:28:3.83:45,4,0	0/0:25,0:23:1.86:0,2,2	1/1:36,0:30:1.55:4,2,0	0/0:18,0:16:26.83:0,27,782	0/0:24,0:23:52.29:0,52,1476	0/0:19,0:19:20.75:0,21,1082	0/0:5,0:4:12.03:0,12,345
chr10	51733849	.	TCACACACACACA	T	192.03	PASS	AB=0.769;AC=15;AF=0.268;AN=56;BaseQRankSum=4.391;DP=572;FS=1.441;HRun=0;HaplotypeScore=173.1103;InbreedingCoeff=0.4641;MQ=43.88;MQ0=41;MQRankSum=-3.994;QD=0.83;ReadPosRankSum=1.037;VQSLOD=2.9860;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:24:30.24:0,30,1417	0/1:5,0:9:0.17:0,0,0	0/0:3,0:1:3.01:0,3,136	0/0:3,0:1:3.01:0,3,86	0/1:8,0:12:0:0,0,0	0/0:21,0:20:36.12:0,36,1514	0/0:21,0:20:36.87:0,37,1596	0/0:18,0:17:21.33:0,21,598	0/0:25,0:23:40.08:0,40,1501	0/0:19,0:16:30.10:0,30,1125	0/0:13,0:12:12.04:0,12,532	1/1:11,7:17:1.89:57,2,0	1/1:20,0:20:5.98:161,6,0	0/0:26,0:24:18.53:0,19,849	1/1:29,0:29:3.01:30,3,0	0/1:19,0:32:39.93:45,0,40	0/0:15,0:13:17.09:0,17,159	0/1:12,0:11:17.91:18,0,358	0/0:19,0:18:18.06:0,18,809	0/0:28,0:27:32.74:0,33,1327	0/0:37,0:31:40.91:0,41,1424	1/1:17,10:27:0.47:1,0,0	0/1:18,6:23:0:0,0,0	1/1:37,0:32:1.55:4,2,0	0/0:18,0:16:24.08:0,24,1092	0/0:23,0:23:51.07:0,51,1933	0/0:20,0:20:27.08:0,27,875	0/0:6,0:5:13.86:0,14,463
chr10	51734258	.	T	TCTTCCTTCCTTCCTTCCTTC	8729.51	PASS	AB=0.774;AC=15;AF=0.268;AN=56;BaseQRankSum=7.138;DP=682;FS=0.000;HRun=0;HaplotypeScore=312.0528;InbreedingCoeff=0.8674;MQ=62.76;MQ0=2;MQRankSum=-11.109;QD=39.86;ReadPosRankSum=-3.170;VQSLOD=2.8403;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:43:32.10:1136,32,0	0/0:7,0:7:12.04:0,12,613	0/0:21,0:16:9.01:0,9,131	0/0:12,0:10:9.03:0,9,182	0/0:30,0:30:72.24:0,72,3576	0/0:24,0:24:51.15:0,51,2049	0/0:29,0:30:48.15:0,48,1900	0/0:41,0:41:30.05:0,30,507	0/0:26,0:26:48.16:0,48,1730	0/0:24,0:25:57.19:0,57,2351	0/0:10,0:10:30.09:0,30,1302	1/1:14,12:27:20.92:1735,21,0	1/1:17,11:31:27.09:2057,27,0	0/0:31,0:31:63.21:0,63,2333	0/0:24,0:24:45.14:0,45,1693	0/0:21,0:21:51.17:0,51,2143	1/1:18,0:25:24.08:738,24,0	0/1:17,0:24:68.88:100,0,69	0/0:14,0:14:9.03:0,9,373	0/0:20,0:20:36.11:0,36,1308	0/0:20,0:21:43.70:0,44,1617	1/1:18,0:18:18.06:972,18,0	1/1:8,5:16:15.52:1061,16,0	1/1:24,9:35:16.61:931,17,0	0/0:26,0:26:60.20:0,60,2685	0/0:37,0:38:81.26:0,81,3344	0/0:19,0:19:27.09:0,27,1324	0/0:23,0:23:36.10:0,36,1336
chr10	51735629	.	AT	A	1398.38	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=8.368;DP=459;FS=30.608;HRun=8;HaplotypeScore=56.7029;InbreedingCoeff=0.9764;MQ=68.65;MQ0=0;MQRankSum=-1.416;QD=24.11;ReadPosRankSum=1.329;VQSLOD=1.9376;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:51.16:0,51,615	0/0:9,0:9:21.06:0,21,252	0/0:6,0:6:8.85:0,9,77	0/0:8,0:8:11.61:0,12,124	0/0:33,0:33:90.22:0,90,1060	0/0:24,0:24:63.19:0,63,761	0/0:13,0:13:39.09:0,39,448	0/0:28,0:27:75.21:0,75,887	0/0:10,0:10:30.08:0,30,353	0/0:16,0:16:48.13:0,48,562	0/0:26,0:26:78.24:0,78,942	1/1:0,13:13:39:366,39,0	1/1:0,10:10:27.04:261,27,0	0/0:16,0:16:45.14:0,45,543	0/0:15,0:15:45.14:0,45,544	0/0:12,0:12:36.10:0,36,423	0/0:30,0:30:74.78:0,75,930	0/0:16,0:16:36.11:0,36,434	0/0:16,0:16:42.12:0,42,498	0/0:26,0:26:69.20:0,69,823	0/0:13,0:13:36.10:0,36,424	1/1:0,12:12:36.06:348,36,0	1/1:0,13:13:39.06:376,39,0	1/1:1,9:10:24:223,24,0	0/0:20,0:20:51.14:0,51,597	0/0:15,0:15:42.11:0,42,489	0/0:18,0:18:48.08:0,48,549	0/0:12,0:12:33.07:0,33,374
chr10	51735710	.	CAA	C	2810.66	PASS	AB=1.000;AC=18;AF=0.321;AN=56;BaseQRankSum=15.591;DP=538;FS=26.296;HRun=4;HaplotypeScore=107.5748;InbreedingCoeff=0.8282;MQ=61.46;MQ0=8;MQRankSum=-7.992;QD=18.74;ReadPosRankSum=0.721;VQSLOD=0.1848;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:32:93.32:0,93,1631	1/1:5,1:6:16.86:199,17,0	0/0:18,0:13:24.59:0,25,360	0/0:23,0:11:23.09:0,23,258	0/0:32,0:32:93.30:0,93,1635	0/0:19,0:19:57.19:0,57,962	0/0:15,0:15:39.12:0,39,606	0/0:29,0:29:84.28:0,84,1433	0/0:17,0:17:51.17:0,51,909	0/0:24,0:24:72.24:0,72,1268	0/0:25,0:25:72.21:0,72,1203	1/1:12,3:15:8.07:328,8,0	0/1:10,0:9:11.25:136,0,11	0/0:11,0:11:33.11:0,33,586	1/1:16,2:17:47.82:476,48,0	0/1:13,0:13:17.31:384,0,17	1/1:28,0:29:39.83:359,40,0	1/1:19,0:20:27.20:309,27,0	0/0:22,0:21:62.01:0,62,961	0/0:29,0:29:87.30:0,87,1556	0/0:14,0:14:42.13:0,42,694	1/1:12,1:12:28.75:268,29,0	1/1:10,3:13:35.66:336,36,0	1/1:12,1:12:19.52:222,20,0	0/0:22,0:22:66.22:0,66,1159	0/0:25,0:24:72.20:0,72,1281	0/0:22,0:22:66.22:0,66,1115	0/0:8,0:8:24.08:0,24,449
chr10	51735712	.	A	AC	4934.95	PASS	AB=0.675;AC=17;AF=0.304;AN=56;BaseQRankSum=15.395;DP=544;FS=21.475;HRun=0;HaplotypeScore=96.1138;InbreedingCoeff=0.8079;MQ=60.44;MQ0=8;MQRankSum=-9.551;QD=32.25;ReadPosRankSum=0.909;VQSLOD=3.3611;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,2:32:93.31:0,93,1300	1/1:3,4:7:18.06:259,18,0	0/0:17,0:12:30.73:0,31,376	0/0:23,0:11:24.57:0,25,239	0/0:32,0:32:93.30:0,93,1280	0/0:19,0:19:57.18:0,57,781	0/0:14,0:14:42.07:0,42,531	0/0:29,0:29:84.27:0,84,1160	0/0:18,0:18:54.17:0,54,738	0/0:24,0:24:72.23:0,72,984	0/0:26,0:26:75.20:0,75,990	0/1:9,6:15:12.45:436,0,12	0/1:5,4:8:3.48:214,0,3	0/0:11,0:11:33.11:0,33,462	1/1:6,12:17:45.46:581,45,0	0/1:5,8:13:2.85:460,0,3	1/1:4,26:30:66.68:992,67,0	1/1:2,18:20:48.14:721,48,0	0/0:24,0:23:68.01:0,68,881	0/0:29,0:29:87.29:0,87,1205	0/0:14,0:14:42.13:0,42,569	1/1:6,8:13:29.58:423,30,0	1/1:7,7:14:36.10:506,36,0	1/1:6,7:12:23.69:342,24,0	0/0:22,0:22:66.22:0,66,922	0/0:25,0:24:72.20:0,72,984	0/0:22,0:22:66.21:0,66,907	0/0:9,0:9:24.08:0,24,336
chr10	51735720	.	AC	A	1314.71	PASS	AB=0.925;AC=13;AF=0.232;AN=56;BaseQRankSum=12.460;DP=544;FS=10.959;HRun=1;HaplotypeScore=105.2066;InbreedingCoeff=0.4053;MQ=59.35;MQ0=7;MQRankSum=-8.773;QD=9.53;ReadPosRankSum=-3.364;VQSLOD=-0.4566;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:32:93.24:0,93,1416	1/1:5,3:8:3.62:158,4,0	0/0:16,0:11:18.54:0,19,362	0/0:21,1:11:2.99:0,3,295	0/0:31,0:31:90.29:0,90,1414	0/0:17,0:17:51.16:0,51,785	0/0:12,0:12:36.07:0,36,546	0/0:33,0:33:96.30:0,96,1472	0/0:19,0:19:57.19:0,57,910	0/0:22,0:22:66.23:0,66,1055	0/0:23,0:23:69.24:0,69,1096	0/1:16,0:16:20.13:143,0,20	0/1:13,0:12:11.44:132,0,11	0/0:11,0:11:33.11:0,33,527	1/1:5,11:15:11.75:369,12,0	0/1:4,6:10:18.04:254,0,18	0/0:29,0:29:16.91:0,17,221	0/1:22,0:22:76.15:76,0,115	0/0:21,0:20:57.19:0,57,905	0/0:30,0:30:90.29:0,90,1405	0/0:11,0:11:33.11:0,33,527	1/1:16,0:15:19.68:146,20,0	0/1:21,0:21:13.14:156,0,13	1/1:14,1:15:4.08:44,4,0	0/0:20,0:20:60.20:0,60,959	0/0:25,0:24:72.25:0,72,1145	0/0:21,0:21:63.20:0,63,976	0/0:10,0:10:30.10:0,30,479
chr10	51736621	.	TG	T	3778.33	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=11.212;DP=656;FS=4.946;HRun=2;HaplotypeScore=63.1020;InbreedingCoeff=0.9971;MQ=90.85;MQ0=0;MQRankSum=-2.510;QD=34.66;ReadPosRankSum=2.021;VQSLOD=4.1985;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:96.32:0,96,1426	0/0:8,0:8:24.07:0,24,339	0/0:33,0:33:93.25:0,93,1310	0/0:23,0:23:66.06:0,66,942	0/0:21,0:21:60.19:0,60,879	0/0:32,0:32:96.33:0,96,1439	0/0:31,0:31:90.30:0,90,1346	0/0:21,0:21:60.20:0,60,882	0/0:22,0:22:63.21:0,63,932	0/0:16,0:16:48.14:0,48,681	0/0:8,0:7:21.07:0,21,315	1/1:0,32:32:87.28:1130,87,0	1/1:0,19:19:48.15:623,48,0	0/0:30,0:30:84.27:0,84,1237	0/0:26,0:26:78.26:0,78,1163	0/0:29,0:29:87.29:0,87,1303	0/0:34,0:34:96.33:0,96,1439	0/0:15,0:15:45.15:0,45,671	0/0:24,0:24:69.21:0,69,1000	0/0:21,0:21:60.19:0,60,878	0/0:53,0:53:99:0,153,2233	1/1:0,17:17:45.15:584,45,0	1/1:0,8:8:24.08:312,24,0	1/1:1,32:33:87.28:1130,87,0	0/0:18,0:18:51.17:0,51,762	0/0:28,0:28:81.27:0,81,1213	0/0:15,0:14:45.15:0,45,665	0/0:7,0:7:21.07:0,21,315
chr10	51736762	.	C	CGA	2936.69	PASS	AB=1.000;AC=14;AF=0.250;AN=56;BaseQRankSum=-8.561;DP=546;FS=0.000;HRun=0;HaplotypeScore=95.5914;InbreedingCoeff=0.5757;MQ=81.02;MQ0=0;MQRankSum=-2.035;QD=14.98;ReadPosRankSum=0.428;VQSLOD=3.2759;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:51.08:0,51,682	0/0:12,0:12:1.23:0,1,64	0/0:22,0:23:43.73:0,44,566	0/0:13,0:12:26.40:0,26,228	0/0:19,0:19:38.83:0,39,546	0/0:18,0:18:36.06:0,36,502	0/0:25,0:27:71.78:0,72,993	0/0:18,0:18:36.04:0,36,445	0/0:13,0:17:41.28:0,41,498	0/0:14,0:14:42.09:0,42,515	0/0:10,0:10:8.99:0,9,111	1/1:4,19:23:42.14:749,42,0	1/1:8,11:20:45.11:707,45,0	0/0:29,0:34:74.82:0,75,1058	0/1:22,0:22:22.16:22,0,109	0/1:28,0:28:57.85:58,0,154	0/1:32,0:31:17.06:17,0,153	0/1:20,0:20:47.86:48,0,81	0/0:11,0:12:29.62:0,30,317	0/0:13,0:13:21.07:0,21,318	0/0:18,0:20:47.67:0,48,612	1/1:4,11:15:29.99:484,30,0	1/1:3,8:11:20.65:338,21,0	1/1:3,21:25:39.13:698,39,0	0/0:21,0:23:32.68:0,33,427	0/0:23,0:23:57.08:0,57,740	0/0:15,0:17:38.58:0,39,477	0/0:12,0:12:15.05:0,15,229
chr10	51736763	.	G	GA	1342.09	PASS	AB=0.994;AC=14;AF=0.250;AN=56;BaseQRankSum=4.474;DP=523;FS=3.341;HRun=0;HaplotypeScore=81.5574;InbreedingCoeff=0.4321;MQ=81.93;MQ0=0;MQRankSum=-1.277;QD=6.95;ReadPosRankSum=2.080;VQSLOD=3.5823;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:54.08:0,54,660	0/1:12,0:12:9.04:9,0,22	0/0:23,0:23:21.46:0,21,517	0/0:15,0:13:12.42:0,12,205	0/0:19,0:19:41.65:0,42,541	0/0:18,0:18:45.97:0,46,546	0/0:27,0:27:68.20:0,68,938	0/0:19,0:19:39.93:0,40,447	0/0:17,0:17:32.82:0,33,463	0/0:14,0:14:42.11:0,42,514	0/0:7,0:7:9.03:0,9,124	1/1:18,1:19:41.64:296,42,0	0/1:20,0:20:44.44:252,0,44	0/0:34,0:34:84.01:0,84,1075	0/1:22,0:22:24.30:51,0,24	0/1:28,0:28:53.81:93,0,54	0/1:28,1:28:39.32:79,0,39	0/1:20,0:20:10.29:73,0,10	0/0:10,0:10:24.57:0,25,287	0/0:14,0:14:30.06:0,30,366	0/0:21,0:21:47.87:0,48,597	1/1:11,1:12:29.78:246,30,0	1/1:7,1:8:20.86:165,21,0	1/1:23,0:23:17.38:256,17,0	0/0:22,0:22:44.88:0,45,532	0/0:23,0:23:63.07:0,63,744	0/0:15,0:15:35.56:0,36,463	0/0:12,0:12:27.01:0,27,304
chr10	51740093	.	GCACA	G	1811.19	PASS	AB=0.982;AC=11;AF=0.204;AN=54;BaseQRankSum=4.490;DP=568;FS=0.638;HRun=0;HaplotypeScore=114.2225;InbreedingCoeff=0.5908;MQ=54.86;MQ0=17;MQRankSum=1.827;QD=11.92;ReadPosRankSum=2.095;VQSLOD=2.8619;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:25:38.88:539,39,0	0/0:6,0:6:5.36:0,5,179	./.	0/0:19,0:4:0.47:0,0,1	0/0:23,0:23:11.66:0,12,437	0/0:20,0:21:30.14:0,30,464	0/0:31,0:30:42.57:0,43,658	0/0:17,0:16:8.61:0,9,248	0/0:19,0:19:26.08:0,26,356	0/0:22,0:19:25.52:0,26,403	0/1:24,0:24:38.50:39,0,499	1/1:24,2:25:26.61:397,27,0	1/1:12,0:12:9.91:136,10,0	0/0:27,0:27:39.26:0,39,611	0/0:14,0:13:12.04:0,12,195	0/0:22,0:22:39.13:0,39,675	0/0:17,0:16:36.12:0,36,555	0/0:14,0:13:18.06:0,18,254	0/0:17,0:15:28.33:0,28,408	0/1:17,0:17:38.95:39,0,260	0/0:32,0:30:3.14:0,3,605	0/1:17,0:18:2.66:241,0,3	0/0:5,11:18:0:0,0,0	1/1:27,2:30:41.34:583,41,0	0/0:27,0:27:48.13:0,48,778	0/0:20,0:20:38.18:0,38,545	0/0:22,0:22:33.16:0,33,501	0/0:12,0:11:18.06:0,18,274
chr10	51740156	.	GAGAGAGAGAGAA	G	1169.73	PASS	AC=16;AF=0.296;AN=54;BaseQRankSum=2.186;DP=540;FS=2.034;HRun=0;HaplotypeScore=174.0858;InbreedingCoeff=0.8730;MQ=53.58;MQ0=15;MQRankSum=0.425;QD=10.63;ReadPosRankSum=-2.591;VQSLOD=2.3850;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:14.11:0,14,118	1/1:9,2:10:21.01:417,21,0	0/0:10,0:8:11.06:0,11,104	0/0:27,0:14:20.03:0,20,194	0/0:38,0:38:34.67:0,35,735	0/0:16,0:16:24.03:0,24,558	0/0:21,0:18:31.35:0,31,719	0/0:30,0:29:65.54:0,66,716	0/0:19,1:20:33.21:0,33,1035	0/0:26,0:22:53.38:0,53,1025	0/0:22,0:21:36.49:0,36,752	1/1:14,0:14:5.99:50,6,0	1/1:8,0:8:8.99:74,9,0	0/0:28,0:27:33.47:0,33,1367	1/1:13,2:15:12.46:101,12,0	1/1:19,0:19:14.94:142,15,0	1/1:19,0:19:23.78:180,24,0	1/1:12,2:12:27.38:370,27,0	0/0:15,0:14:6.15:0,6,424	0/0:35,0:34:69.15:0,69,1068	0/0:29,0:28:19.71:0,20,1502	0/0:6,0:6:0:0,0,0	./.	1/1:10,0:10:2.54:24,3,0	0/0:17,0:17:28.62:0,29,832	0/0:23,0:23:62.98:0,63,1750	0/0:25,0:25:35.80:0,36,1224	0/0:13,0:12:19.49:0,19,221
chr10	51740255	.	CTA	C	10268.77	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=15.226;DP=698;FS=6.944;HRun=0;HaplotypeScore=87.8938;InbreedingCoeff=0.9994;MQ=78.98;MQ0=2;MQRankSum=-0.734;QD=41.41;ReadPosRankSum=5.478;VQSLOD=6.3985;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,123,2419	1/1:0,8:8:20.94:341,21,0	0/0:29,0:28:73:0,73,1504	0/0:21,0:21:60.20:0,60,1094	0/0:24,0:24:69.20:0,69,1291	0/0:25,0:25:69.24:0,69,1388	0/0:20,0:20:60.21:0,60,1216	0/0:30,0:30:81.22:0,81,1506	0/0:21,0:21:63.19:0,63,1194	0/0:33,0:33:99:0,99,1941	0/0:18,0:18:54.06:0,54,1015	1/1:0,25:25:57.19:925,57,0	1/1:0,34:33:93.32:1509,93,0	0/0:26,0:26:72.25:0,72,1450	1/1:0,22:22:60.20:974,60,0	1/1:0,30:30:81.28:1316,81,0	1/1:0,33:32:84.29:1362,84,0	1/1:0,26:26:66.23:1072,66,0	0/0:24,0:24:72.19:0,72,1344	0/0:22,0:22:66.19:0,66,1233	0/0:25,0:25:75.24:0,75,1470	1/1:0,24:24:63.22:1022,63,0	1/1:0,21:21:51.04:825,51,0	1/1:0,25:25:57.19:922,57,0	0/0:20,0:20:60.20:0,60,1172	0/0:22,0:21:66.21:0,66,1273	0/0:25,0:24:75.22:0,75,1447	0/0:24,0:24:72.25:0,72,1442
chr10	51740598	.	T	TA	618.95	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=2.176;DP=687;FS=0.000;HRun=4;HaplotypeScore=73.7586;InbreedingCoeff=0.9952;MQ=82.52;MQ0=0;MQRankSum=-2.546;QD=26.91;ReadPosRankSum=1.339;VQSLOD=2.9114;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:78.19:0,78,871	0/0:12,0:12:27.07:0,27,306	0/0:24,0:24:55.85:0,56,665	0/0:14,0:14:36.07:0,36,389	0/0:35,0:35:99:0,102,1146	0/0:29,0:29:84.24:0,84,953	0/0:22,0:22:60.15:0,60,670	0/0:32,0:32:90.25:0,90,1013	0/0:17,0:17:45.11:0,45,500	0/0:31,0:31:90.26:0,90,1021	0/0:26,0:26:78.20:0,78,873	0/0:17,0:17:48.14:0,48,544	0/0:25,0:25:69.16:0,69,760	0/0:26,0:26:72.20:0,72,817	0/0:35,0:35:99:0,102,1147	0/0:26,0:26:66.17:0,66,739	1/1:0,9:9:18.06:246,18,0	1/1:0,14:14:36.12:492,36,0	0/0:28,0:28:75.20:0,75,843	0/0:30,0:30:69.19:0,69,781	0/0:18,0:18:54.15:0,54,612	0/0:32,0:32:87.23:0,87,977	0/0:31,0:31:87.25:0,87,985	0/0:17,0:17:48.14:0,48,544	0/0:24,0:24:69.18:0,69,774	0/0:36,0:36:99:0,99,1115	0/0:30,0:30:90.26:0,90,1020	0/0:17,0:17:51.15:0,51,578
chr10	51740725	.	CA	C	6776.64	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=13.314;DP=653;FS=4.293;HRun=2;HaplotypeScore=61.5077;InbreedingCoeff=0.9998;MQ=91.14;MQ0=0;MQRankSum=-1.593;QD=36.83;ReadPosRankSum=4.672;VQSLOD=5.4012;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,111,1614	1/1:0,10:10:30.10:390,30,0	0/0:30,0:30:81.24:0,81,1141	0/0:23,0:23:66:0,66,894	0/0:32,0:32:93.30:0,93,1360	0/0:25,0:25:69.23:0,69,1015	0/0:21,0:21:63.15:0,63,897	0/0:37,0:37:99:0,111,1648	0/0:21,0:21:63.21:0,63,944	0/0:27,0:27:81.27:0,81,1198	0/0:23,0:23:69.22:0,69,1015	1/1:0,14:14:36.12:467,36,0	1/1:0,23:23:66.21:856,66,0	0/0:21,0:21:60.18:0,60,853	1/1:1,28:29:81.26:1052,81,0	1/1:0,17:17:51.17:662,51,0	1/1:0,15:15:42.14:545,42,0	1/1:0,11:11:33.11:428,33,0	0/0:23,0:23:66.19:0,66,965	0/0:26,0:26:72.23:0,72,1059	0/0:17,0:17:51.17:0,51,763	1/1:1,19:20:54.18:701,54,0	1/1:1,21:22:60.15:778,60,0	1/1:0,23:23:69.22:896,69,0	0/0:28,0:28:81.27:0,81,1211	0/0:37,0:37:99:0,106,1574	0/0:31,0:31:93.32:0,93,1394	0/0:10,0:10:30.10:0,30,444
chr10	51741662	.	G	GTGGCTA	20012.44	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-1.061;DP=795;FS=2.146;HRun=0;HaplotypeScore=168.5721;InbreedingCoeff=0.9742;MQ=87.49;MQ0=0;MQRankSum=-20.044;QD=75.52;ReadPosRankSum=3.112;VQSLOD=5.5962;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,163,3708	1/1:4,9:14:42.14:1391,42,0	0/0:39,0:39:99:0,111,2414	0/0:28,0:29:69.22:0,69,1478	0/0:33,0:33:90.30:0,90,2015	0/0:30,0:30:87.30:0,87,1972	0/0:35,0:35:99:0,99,2176	0/0:34,0:34:93.29:0,93,2002	0/0:41,0:41:99:0,117,2574	0/0:34,0:34:99:0,99,2168	0/0:21,0:21:63.22:0,63,1448	1/1:5,28:35:90.31:3076,90,0	1/1:6,24:34:72.25:2438,72,0	0/0:24,0:24:66.23:0,66,1513	1/1:9,30:42:93.32:3057,93,0	1/1:4,23:28:78.27:2642,78,0	1/1:4,14:20:45.15:1528,45,0	1/1:4,8:13:30.10:1053,30,0	0/0:22,0:22:60.21:0,60,1347	0/0:27,0:27:75.24:0,75,1718	0/0:34,0:34:90.29:0,90,2032	1/1:4,18:24:45.15:1560,45,0	1/1:6,16:23:39.13:1350,39,0	1/1:8,24:32:54.64:1918,55,0	0/0:19,0:19:54.19:0,54,1230	0/0:25,0:25:75.26:0,75,1773	0/0:28,0:28:78.27:0,78,1773	0/0:1,0:1:3.01:0,3,70
chr10	51746957	.	TGTAAA	T	7139.40	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=14.656;DP=604;FS=87.498;HRun=0;HaplotypeScore=112.8290;InbreedingCoeff=0.9861;MQ=76.70;MQ0=0;MQRankSum=-14.963;QD=50.63;ReadPosRankSum=2.350;VQSLOD=1.7519;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,120,3516	1/1:0,10:10:24.08:510,24,0	0/0:13,0:13:9.26:0,9,799	0/0:15,0:15:45.13:0,45,1249	0/0:30,0:30:81.26:0,81,2398	0/0:23,0:23:69.23:0,69,2092	0/0:18,0:18:54.18:0,54,1620	0/0:30,0:30:90.30:0,90,2658	0/0:30,0:30:87.28:0,87,2583	0/0:42,0:42:99:0,120,3560	0/0:23,0:23:68.26:0,68,2058	1/1:0,14:14:36.12:766,36,0	1/1:3,13:16:39.13:829,39,0	0/0:24,0:24:72.25:0,72,2237	1/1:0,22:22:54.19:1149,54,0	1/1:0,15:15:30.10:613,30,0	1/1:0,11:11:24.08:511,24,0	1/1:0,5:5:15.05:320,15,0	0/0:28,0:28:81.23:0,81,2205	0/0:33,0:33:96.30:0,96,2863	0/0:15,0:15:42.13:0,42,1248	1/1:1,17:18:45.15:957,45,0	1/1:0,24:24:60.21:1249,60,0	1/1:2,4:6:14.97:235,15,0	0/0:24,0:24:72.25:0,72,2256	0/0:29,0:29:84.28:0,84,2564	0/0:36,0:36:99:0,102,3150	0/0:10,0:10:27.09:0,27,845
chr10	51748139	.	G	GCA	9416.88	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=14.484;DP=659;FS=3.734;HRun=0;HaplotypeScore=108.6279;InbreedingCoeff=0.9951;MQ=67.60;MQ0=0;MQRankSum=-3.402;QD=41.12;ReadPosRankSum=3.088;VQSLOD=6.8819;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:96.31:0,96,1260	1/1:3,8:11:27.08:420,27,0	0/0:25,0:21:37.26:0,37,404	0/0:13,0:10:15.03:0,15,179	0/0:22,0:22:60.19:0,60,777	0/0:26,0:26:75.24:0,75,984	0/0:19,0:19:48.15:0,48,618	0/0:29,0:29:72.22:0,72,920	0/0:28,0:28:75.21:0,75,953	0/0:21,0:21:57.18:0,57,748	0/0:21,0:21:57.16:0,57,721	1/1:6,9:15:36.11:577,36,0	1/1:7,18:26:69.24:1129,69,0	0/0:31,0:31:87.26:0,87,1115	1/1:7,17:24:60.19:961,60,0	1/1:4,20:24:66.20:1080,66,0	1/1:7,27:34:84.29:1430,84,0	1/1:3,19:22:51.17:850,51,0	0/0:27,0:27:69.22:0,69,894	0/0:25,0:25:72.23:0,72,946	0/0:31,0:31:87.27:0,87,1123	1/1:4,23:27:78.27:1276,78,0	1/1:5,18:22:54.18:902,54,0	1/1:7,16:23:48.16:793,48,0	0/0:23,0:23:60.19:0,60,788	0/0:22,0:22:63.20:0,63,827	0/0:22,0:22:54.17:0,54,692	0/0:7,0:7:15.05:0,15,197
chr10	51748147	.	AT	A	271.18	PASS	AB=0.989;AC=11;AF=0.196;AN=56;BaseQRankSum=15.076;DP=666;FS=2.704;HRun=9;HaplotypeScore=128.7346;InbreedingCoeff=0.2823;MQ=68.41;MQ0=0;MQRankSum=-0.809;QD=1.41;ReadPosRankSum=3.409;VQSLOD=-0.6023;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:93.25:0,93,1055	1/1:12,0:12:1.91:41,2,0	0/0:30,0:23:41.98:0,42,351	0/1:11,1:8:1.16:3,0,1	0/0:23,0:23:66.17:0,66,741	0/0:28,0:28:72.19:0,72,811	0/0:16,1:17:17.63:0,18,427	0/0:28,0:28:66.18:0,66,752	0/0:30,0:30:75.20:0,75,842	0/0:20,0:20:45.11:0,45,496	0/0:19,1:20:23.68:0,24,525	0/1:17,0:17:22.09:32,0,22	0/1:26,0:26:36.63:37,0,57	0/0:33,0:33:56.77:0,57,887	0/1:24,0:24:2.87:58,0,3	1/1:24,0:24:4.87:76,5,0	0/0:31,0:34:92.16:0,92,696	0/0:21,0:22:51.62:0,52,364	0/0:24,0:24:63.13:0,63,682	0/0:30,0:30:90.27:0,90,1038	0/0:29,0:29:75.18:0,75,834	0/1:33,0:33:3:81,0,3	0/1:23,0:22:34.72:47,0,35	0/1:20,0:21:28.47:38,0,28	0/0:21,0:21:57.14:0,57,629	0/0:23,0:23:66.18:0,66,747	0/0:20,1:21:32.60:0,33,580	0/0:7,0:7:21.06:0,21,242
chr10	51748156	.	TA	T	4306.66	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=17.522;DP=651;FS=0.708;HRun=5;HaplotypeScore=116.4785;InbreedingCoeff=0.9570;MQ=69.46;MQ0=0;MQRankSum=-1.924;QD=17.94;ReadPosRankSum=2.115;VQSLOD=3.7922;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:93.25:0,93,1184	1/1:1,11:12:27.06:279,27,0	0/0:26,0:19:20.13:0,20,332	0/0:12,0:8:12.93:0,13,81	0/0:23,0:23:66.19:0,66,837	0/0:24,0:24:66.21:0,66,864	0/0:16,0:16:36.57:0,37,457	0/0:29,0:29:84.20:0,84,981	0/0:27,0:27:81.23:0,81,1020	0/0:17,0:17:42.07:0,42,509	0/0:21,0:21:58.46:0,58,701	1/1:7,10:17:39.06:394,39,0	1/1:13,15:28:65.90:607,66,0	0/0:29,0:29:83.72:0,84,1027	1/1:3,21:24:56.96:552,57,0	1/1:2,24:26:60.13:622,60,0	1/1:35,0:35:1.74:71,2,0	1/1:22,0:22:10.73:81,11,0	0/0:23,0:23:54.15:0,54,670	0/0:32,0:32:96.26:0,96,1200	0/0:29,0:29:78.20:0,78,965	1/1:3,29:32:83.69:796,84,0	1/1:5,18:22:53.97:530,54,0	1/1:4,17:21:40.94:375,41,0	0/0:21,0:21:54.15:0,54,668	0/0:21,0:21:60.19:0,60,775	0/0:21,0:21:50.66:0,51,625	0/0:7,0:7:21.07:0,21,274
chr10	51749356	.	AAG	A	2439.46	PASS	AB=0.926;AC=11;AF=0.196;AN=56;BaseQRankSum=6.885;DP=749;FS=5.665;HRun=0;HaplotypeScore=105.8348;InbreedingCoeff=0.8654;MQ=61.99;MQ0=8;MQRankSum=-0.098;QD=14.43;ReadPosRankSum=3.511;VQSLOD=3.4636;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,112,1744	0/0:3,0:11:17.97:0,18,152	0/0:28,0:16:13.42:0,13,126	0/0:41,0:17:5.28:0,5,185	0/0:31,0:31:69.24:0,69,1105	0/0:21,0:21:46.25:0,46,738	0/0:21,1:22:36.21:0,36,613	0/0:42,0:41:64.61:0,65,1302	0/0:10,0:10:30.09:0,30,458	0/1:23,2:25:8.64:9,0,790	0/0:20,0:20:44.87:0,45,673	1/1:7,25:30:48.15:591,48,0	1/1:4,18:22:39.12:477,39,0	0/0:29,0:29:78.27:0,78,1245	0/0:3,0:17:32.99:0,33,288	0/0:3,0:27:38.99:0,39,343	0/0:6,0:32:49.23:0,49,425	0/0:4,0:26:32.21:0,32,272	0/0:23,1:23:19.08:0,19,732	0/0:24,0:24:16.40:0,16,686	0/0:21,0:20:60.20:0,60,961	1/1:5,23:28:33.10:406,33,0	1/1:4,19:23:29.78:346,30,0	1/1:9,30:39:45.33:787,45,0	0/0:27,0:27:60.18:0,60,934	0/0:30,0:30:87.20:0,87,1317	0/0:25,0:24:69.22:0,69,1055	0/0:21,0:21:48.12:0,48,724
chr10	51750047	.	GCT	G	10054.41	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=19.650;DP=684;FS=3.463;HRun=0;HaplotypeScore=108.0298;InbreedingCoeff=0.9992;MQ=87.79;MQ0=0;MQRankSum=-2.119;QD=45.29;ReadPosRankSum=3.154;VQSLOD=6.3253;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:75.24:0,75,1487	1/1:0,7:7:21.07:343,21,0	0/0:25,0:25:75.25:0,75,1435	0/0:23,0:23:66.22:0,66,1285	0/0:34,0:34:99:0,102,2059	0/0:32,0:32:96.32:0,96,1914	0/0:20,0:20:60.21:0,60,1202	0/0:27,0:27:81.26:0,81,1540	0/0:22,0:22:66.23:0,66,1326	0/0:41,0:41:99:0,120,2379	0/0:22,0:22:66.23:0,66,1340	1/1:0,18:18:51.17:832,51,0	1/1:0,27:27:81.28:1321,81,0	0/0:24,0:24:72.25:0,72,1463	1/1:0,32:32:96.33:1566,96,0	1/1:0,30:30:87.30:1419,87,0	1/1:0,27:27:69.24:1124,69,0	1/1:0,12:12:33.11:538,33,0	0/0:21,0:21:63.22:0,63,1277	0/0:33,0:33:99:0,99,2010	0/0:16,0:16:48.15:0,48,938	1/1:0,25:25:72.16:1106,72,0	1/1:0,24:24:54.18:881,54,0	1/1:0,20:20:57.19:925,57,0	0/0:24,0:24:72.25:0,72,1446	0/0:32,0:32:96.33:0,96,1951	0/0:32,0:32:96.31:0,96,1911	0/0:9,0:9:27.09:0,27,549
chr10	51751326	.	A	ATT	4501.50	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-10.563;DP=566;FS=2.012;HRun=3;HaplotypeScore=64.0410;InbreedingCoeff=0.9976;MQ=81.85;MQ0=1;MQRankSum=-1.125;QD=45.02;ReadPosRankSum=2.843;VQSLOD=4.4535;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:57.19:0,57,798	0/0:13,0:13:36.12:0,36,504	0/0:21,0:21:57.19:0,57,788	0/0:17,0:17:42.12:0,42,567	0/0:23,0:23:57.19:0,57,795	0/0:23,0:23:63.21:0,63,879	0/0:27,0:27:75.25:0,75,1049	0/0:37,0:37:99:0,105,1433	0/0:12,0:12:36.12:0,36,504	0/0:21,0:21:57.19:0,57,798	0/0:15,0:15:39.09:0,39,525	1/1:0,25:27:72.25:1320,72,0	1/1:0,22:22:66.23:1210,66,0	0/0:16,0:16:45.14:0,45,613	0/0:22,0:22:63.20:0,63,865	0/0:18,0:18:51.17:0,51,714	0/0:12,0:12:30.10:0,30,420	0/0:25,0:25:63.21:0,63,882	0/0:10,0:9:27.08:0,27,361	0/0:19,0:19:48.16:0,48,672	0/0:23,0:23:57.17:0,57,780	1/1:3,17:22:51.17:927,51,0	1/1:1,12:12:18.05:330,18,0	1/1:0,16:16:39.13:715,39,0	0/0:27,0:27:72.20:0,72,986	0/0:23,0:23:63.18:0,63,834	0/0:30,0:30:78.24:0,78,1072	0/0:11,0:11:33.09:0,33,442
chr10	51752341	.	A	AT	1832.42	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=9.860;DP=527;FS=3.765;HRun=8;HaplotypeScore=72.0041;InbreedingCoeff=0.9882;MQ=76.87;MQ0=0;MQRankSum=-10.459;QD=21.06;ReadPosRankSum=-1.385;VQSLOD=3.2506;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:20:56.05:0,56,496	0/0:6,0:6:18:0,18,160	0/0:12,0:12:24.01:0,24,217	0/0:13,0:13:20.04:0,20,169	0/0:24,0:24:59.99:0,60,542	0/0:39,0:39:99:0,105,961	0/0:13,0:13:36.02:0,36,330	0/0:28,0:28:63:0,63,567	0/0:20,0:20:42:0,42,384	0/0:22,0:22:54.02:0,54,494	0/0:17,0:17:42:0,42,379	1/1:2,15:17:20.59:453,21,0	1/1:5,17:22:29.66:573,30,0	0/0:17,0:17:51.03:0,51,467	0/0:20,0:20:48.47:0,48,435	0/0:20,0:20:48:0,48,434	0/0:20,0:21:42.48:0,42,385	0/0:19,0:19:51.02:0,51,467	0/0:22,0:22:60.02:0,60,546	0/0:23,0:23:51.01:0,51,467	0/0:9,0:9:23.99:0,24,214	1/1:3,11:14:36.01:376,36,0	1/1:4,17:21:18.83:430,19,0	1/1:5,8:13:14.86:173,15,0	0/0:13,0:13:36.02:0,36,330	0/0:19,0:19:51.01:0,51,464	0/0:36,0:36:93.04:0,93,851	0/0:7,0:7:21.01:0,21,192
chr10	51752358	.	C	CA	7360.50	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-1.451;DP=551;FS=1.991;HRun=0;HaplotypeScore=58.6218;InbreedingCoeff=0.9905;MQ=80.09;MQ0=0;MQRankSum=-9.012;QD=40.67;ReadPosRankSum=1.654;VQSLOD=5.5044;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:51.17:0,51,712	1/1:0,4:4:12.04:191,12,0	0/0:14,0:14:42.14:0,42,584	0/0:16,0:16:38.22:0,38,522	0/0:21,0:21:63.21:0,63,874	0/0:42,0:42:99:0,126,1737	0/0:14,0:14:42.12:0,42,568	0/0:22,0:22:63.16:0,63,840	0/0:17,0:17:51.17:0,51,712	0/0:21,0:21:60.20:0,60,838	0/0:17,0:17:51.16:0,51,694	1/1:1,18:19:12.28:764,12,0	1/1:0,23:23:66.23:1049,66,0	0/0:20,0:20:60.19:0,60,823	1/1:0,28:28:72.25:1150,72,0	1/1:0,21:21:57.19:911,57,0	1/1:0,15:15:36.07:575,36,0	1/1:0,16:16:45.15:718,45,0	0/0:24,0:24:72.23:0,72,990	0/0:32,0:32:87.10:0,87,1166	0/0:12,0:12:36.11:0,36,479	1/1:1,19:20:51.17:812,51,0	1/1:2,21:23:51.07:810,51,0	1/1:0,12:12:23.90:380,24,0	0/0:16,0:16:48.13:0,48,648	0/0:17,0:17:48.16:0,48,670	0/0:39,0:39:99:0,117,1597	0/0:9,0:9:27.09:0,27,377
chr10	51753580	.	AT	A	4009.93	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=15.480;DP=592;FS=3.561;HRun=10;HaplotypeScore=84.1717;InbreedingCoeff=0.9309;MQ=75.85;MQ0=0;MQRankSum=-4.568;QD=19.37;ReadPosRankSum=0.614;VQSLOD=4.4663;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:66.11:0,66,689	1/1:1,8:9:20.99:182,21,0	0/1:16,0:15:0.69:1,0,124	0/0:16,0:15:34.69:0,35,302	0/0:35,0:35:99:0,99,1058	0/0:18,1:19:28.11:0,28,538	0/0:14,0:15:44.95:0,45,479	0/0:32,0:32:75.18:0,75,810	0/0:18,0:18:51.13:0,51,556	0/0:34,0:34:75.20:0,75,823	0/0:22,0:22:54.14:0,54,595	1/1:7,11:17:35.96:308,36,0	1/1:2,19:21:59.98:520,60,0	0/0:26,2:28:29.11:0,29,770	1/1:2,17:19:41.99:365,42,0	1/1:5,15:20:44.98:391,45,0	1/1:2,20:22:56.99:495,57,0	1/1:2,15:17:41.78:364,42,0	0/0:20,0:21:44.92:0,45,458	0/0:27,0:27:69.14:0,69,737	0/0:10,0:10:24.06:0,24,266	1/1:5,23:28:68.81:574,69,0	1/1:1,26:27:77.91:668,78,0	1/1:2,8:10:17.88:143,18,0	0/0:29,0:29:75.12:0,75,805	0/0:29,0:29:78.20:0,78,853	0/0:24,1:25:43.14:0,43,704	0/0:1,0:1:3.01:0,3,33
chr10	51753611	.	T	TA	2861.32	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=9.765;DP=607;FS=2.544;HRun=7;HaplotypeScore=89.4128;InbreedingCoeff=0.9659;MQ=71.76;MQ0=0;MQRankSum=-7.220;QD=28.90;ReadPosRankSum=0.197;VQSLOD=3.8608;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:72.09:0,72,687	0/0:12,0:12:36.06:0,36,348	0/0:14,0:14:10.85:0,11,190	0/0:14,0:12:21.29:0,21,179	0/0:41,0:41:99:0,102,985	0/0:21,0:21:60.08:0,60,574	0/0:18,0:18:45.05:0,45,428	0/0:26,0:26:60.08:0,60,579	0/0:19,0:19:54.09:0,54,521	0/0:33,0:33:90.13:0,90,866	0/0:23,0:23:63.09:0,63,603	1/1:3,11:13:33.10:396,33,0	1/1:3,16:19:48.14:573,48,0	0/0:26,0:26:72.12:0,72,695	0/0:18,0:19:44.10:0,44,412	0/0:18,0:18:45.07:0,45,435	0/0:22,0:22:57.09:0,57,550	0/0:21,0:21:54.08:0,54,522	0/0:23,0:23:60.07:0,60,569	0/0:22,0:22:57.09:0,57,551	0/0:10,0:10:30.05:0,30,290	1/1:3,24:27:72.21:858,72,0	1/1:5,22:27:72.20:847,72,0	1/1:2,10:12:30.09:362,30,0	0/0:38,0:38:99:0,108,1043	0/0:30,0:30:84.13:0,84,811	0/0:31,0:31:90.14:0,90,869	0/0:2,0:2:6.01:0,6,58
chr10	51754284	.	TGCA	T	9337.40	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=15.569;DP=741;FS=8.544;HRun=0;HaplotypeScore=117.7873;InbreedingCoeff=0.9976;MQ=88.36;MQ0=0;MQRankSum=-5.416;QD=37.65;ReadPosRankSum=3.999;VQSLOD=5.5785;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,132,2801	1/1:0,15:15:38.92:591,39,0	0/0:33,0:33:74.51:0,75,1401	0/0:25,0:25:63.20:0,63,1235	0/0:32,0:32:69.24:0,69,1488	0/0:23,0:23:66.21:0,66,1347	0/0:24,0:24:63.22:0,63,1378	0/0:36,0:36:99:0,99,2086	0/0:25,0:25:75.26:0,75,1622	0/0:33,0:33:99:0,99,2115	0/0:24,0:24:66.23:0,66,1422	1/1:3,21:24:63.21:990,63,0	1/1:4,34:38:93.32:1474,93,0	0/0:22,0:22:60.21:0,60,1304	1/1:3,31:34:84.29:1323,84,0	1/1:5,27:32:72.25:1142,72,0	1/1:3,17:20:39.13:618,39,0	1/1:2,14:16:42.14:666,42,0	0/0:28,0:28:66.22:0,66,1393	0/0:25,0:25:66.23:0,66,1426	0/0:29,0:29:81.28:0,81,1750	1/1:2,18:20:54.18:829,54,0	1/1:1,22:23:60.15:943,60,0	1/1:2,24:26:48.16:761,48,0	0/0:22,0:22:51.17:0,51,1101	0/0:23,0:23:63.22:0,63,1362	0/0:36,0:36:93.32:0,93,2033	0/0:5,0:5:15.05:0,15,328
chr10	51754521	.	TATCCTTGGA	T	5092.62	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=10.142;DP=630;FS=10.178;HRun=0;HaplotypeScore=183.3594;InbreedingCoeff=0.9852;MQ=60.33;MQ0=0;MQRankSum=-11.889;QD=71.73;ReadPosRankSum=1.016;VQSLOD=4.1248;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:96.33:0,96,4398	1/1:0,4:4:8.86:293,9,0	0/0:13,0:11:33.09:0,33,1217	0/0:16,0:15:41.71:0,42,1530	0/0:29,0:29:87.30:0,87,4105	0/0:19,0:19:57.20:0,57,2670	0/0:19,0:19:57.18:0,57,2618	0/0:34,0:34:99:0,99,4062	0/0:31,0:31:93.32:0,93,4499	0/0:39,0:39:99:0,117,5311	0/0:25,0:25:75.24:0,75,3362	0/0:26,0:26:78.27:0,78,3740	0/0:25,0:25:75.26:0,75,3649	0/0:25,0:25:75.26:0,75,3690	1/1:0,24:24:63.22:1940,63,0	1/1:0,10:10:27.09:808,27,0	1/1:0,18:18:39.13:1242,39,0	1/1:1,14:15:27.09:809,27,0	0/0:15,0:15:42.14:0,42,1970	0/0:33,0:33:99:0,99,4805	0/0:17,0:17:51.18:0,51,2534	0/0:22,0:22:66.20:0,66,2853	0/0:28,0:28:84.29:0,84,3965	0/0:27,0:27:79.15:0,79,3869	0/0:19,0:19:57.18:0,57,2760	0/0:25,0:25:75.20:0,75,3555	0/0:28,0:28:84.29:0,84,4090	0/0:11,0:11:33.11:0,33,1192
chr10	51754651	.	TTC	T	67.61	PASS	AB=0.827;AC=2;AF=0.036;AN=56;BaseQRankSum=6.182;DP=749;FS=24.135;HRun=0;HaplotypeScore=112.5445;InbreedingCoeff=-0.0371;MQ=68.11;MQ0=2;MQRankSum=6.178;QD=1.09;ReadPosRankSum=-2.784;VQSLOD=0.0749;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,132,2486	0/0:11,0:11:33.11:0,33,637	0/1:16,7:19:99:115,0,511	0/1:34,5:30:41.72:42,0,1211	0/0:25,0:25:75.26:0,75,1448	0/0:32,0:32:96.33:0,96,1829	0/0:28,0:28:84.29:0,84,1591	0/0:36,0:36:96.32:0,96,1802	0/0:25,0:25:75.26:0,75,1448	0/0:22,0:22:63.22:0,63,1217	0/0:18,0:18:54.19:0,54,1043	0/0:32,0:32:93.32:0,93,1770	0/0:27,0:27:81.28:0,81,1565	0/0:26,0:26:75.26:0,75,1423	0/0:29,0:29:87.30:0,87,1675	0/0:17,0:17:51.17:0,51,980	0/0:35,0:35:99:0,102,1931	0/0:34,0:34:99:0,99,1846	0/0:11,0:11:30.09:0,30,549	0/0:32,0:32:96.30:0,96,1763	0/0:43,0:43:99:0,126,2399	0/0:18,0:18:54.19:0,54,1030	0/0:20,0:20:60.21:0,60,1145	0/0:33,0:33:99:0,99,1839	0/0:23,0:23:66.22:0,66,1236	0/0:25,0:25:75.25:0,75,1419	0/0:31,0:31:90.31:0,90,1731	0/0:10,0:10:30.10:0,30,559
chr10	51755150	.	GT	G	3126.40	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=12.053;DP=762;FS=9.187;HRun=1;HaplotypeScore=78.4167;InbreedingCoeff=0.9999;MQ=73.42;MQ0=0;MQRankSum=-1.427;QD=36.78;ReadPosRankSum=4.157;VQSLOD=3.8087;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,144,2215	1/1:0,13:13:33.11:461,33,0	0/0:16,0:16:48.11:0,48,694	0/0:20,0:20:57.14:0,57,842	0/0:38,0:38:99:0,111,1674	0/0:20,0:20:60.16:0,60,886	0/0:35,0:35:99:0,105,1566	0/0:24,0:24:72.22:0,72,1084	0/0:23,0:23:69.22:0,69,1077	0/0:32,0:32:96.30:0,96,1452	0/0:22,0:22:66.20:0,66,1007	0/0:29,0:29:87.27:0,87,1333	0/0:18,0:18:54.18:0,54,857	0/0:27,0:27:81.24:0,81,1266	1/1:0,36:36:99:1425,102,0	1/1:0,36:36:99:1383,99,0	0/0:27,0:27:81.28:0,81,1292	0/0:16,0:16:48.16:0,48,766	0/0:19,0:19:57.17:0,57,865	0/0:27,0:27:81.28:0,81,1291	0/0:36,0:36:99:0,105,1597	0/0:27,0:27:81.22:0,81,1201	0/0:38,0:38:99:0,111,1721	0/0:39,0:39:99:0,117,1789	0/0:19,0:19:57.15:0,57,821	0/0:29,0:29:87.25:0,87,1283	0/0:26,0:26:78.27:0,78,1241	0/0:21,0:21:63.18:0,63,955
chr10	51757016	.	TA	T	4144.96	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=15.200;DP=618;FS=1.536;HRun=9;HaplotypeScore=70.8304;InbreedingCoeff=0.9908;MQ=77.18;MQ0=0;MQRankSum=-2.646;QD=22.05;ReadPosRankSum=5.243;VQSLOD=4.1736;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:75.17:0,75,837	1/1:0,8:8:24.01:220,24,0	0/0:18,0:18:42.10:0,42,462	0/0:19,1:21:37.27:0,37,447	0/0:22,1:23:29.71:0,30,596	0/0:23,0:23:69.19:0,69,786	0/0:25,0:25:63.15:0,63,713	0/0:35,0:35:96.27:0,96,1090	0/0:15,0:15:39.12:0,39,450	0/0:45,0:45:99:0,111,1271	0/0:17,0:17:45.12:0,45,511	1/1:0,23:23:60.03:549,60,0	1/1:0,14:14:39.02:357,39,0	0/0:16,0:16:36.11:0,36,415	1/1:3,17:20:51.03:467,51,0	1/1:2,17:19:42.01:384,42,0	1/1:3,17:20:51.03:467,51,0	1/1:2,16:18:36.02:329,36,0	0/0:26,1:27:41.75:0,42,734	0/0:32,0:32:87.22:0,87,983	0/0:12,0:12:33.10:0,33,381	1/1:2,21:23:57.02:522,57,0	1/1:2,20:22:44.65:411,45,0	1/1:3,18:21:48.01:439,48,0	0/0:27,1:28:47.76:0,48,804	0/0:31,0:31:81.23:0,81,925	0/0:28,0:28:78.22:0,78,889	0/0:4,0:4:9.03:0,9,104
chr10	51758279	.	CTG	C	327.27	PASS	AB=0.905;AC=11;AF=0.212;AN=52;BaseQRankSum=3.424;DP=661;FS=7.598;HRun=0;HaplotypeScore=113.5801;InbreedingCoeff=-0.2679;MQ=55.33;MQ0=12;MQRankSum=1.795;QD=1.26;ReadPosRankSum=0.931;VQSLOD=1.1938;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:24,15:40:18.60:210,0,19	0/0:9,0:9:8.98:0,9,85	./.	./.	0/1:18,2:20:79.09:79,0,127	0/1:29,2:31:9.24:9,0,643	0/1:19,2:21:6.31:6,0,315	0/1:34,0:31:1.45:1,0,197	0/1:11,2:13:45.69:46,0,205	0/1:20,4:25:67.26:67,0,308	0/1:17,0:17:9.20:9,0,269	0/0:27,0:31:5.86:0,6,52	0/0:8,0:13:14.74:0,15,117	0/0:25,0:25:30.10:0,30,445	0/0:25,0:30:8.74:0,9,64	0/0:28,0:29:9:0,9,88	0/0:21,0:24:9.46:0,9,86	0/0:19,0:21:18.42:0,18,169	0/1:13,1:13:15.32:15,0,188	0/0:21,0:21:26.87:0,27,359	0/0:27,0:27:26.85:0,27,483	0/0:18,0:23:2.74:0,3,12	0/0:21,0:21:3.35:0,3,42	0/0:31,0:32:28.83:0,29,273	0/1:13,3:16:9.35:9,0,248	0/0:22,0:23:18.92:0,19,422	0/1:29,0:28:3.18:3,0,345	0/0:5,0:5:6.02:0,6,91
chr10	51759797	.	AG	A	3934.48	PASS	AB=0.920;AC=11;AF=0.196;AN=56;BaseQRankSum=13.091;DP=654;FS=4.594;HRun=5;HaplotypeScore=79.6530;InbreedingCoeff=0.9227;MQ=85.49;MQ0=0;MQRankSum=-2.043;QD=24.90;ReadPosRankSum=3.773;VQSLOD=2.9050;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,126,1665	1/1:0,4:4:12.03:136,12,0	0/0:26,0:26:69.22:0,69,926	0/0:19,0:19:51.08:0,51,629	0/0:20,0:20:54.08:0,54,678	0/0:22,0:22:63.20:0,63,845	0/0:31,0:30:81.26:0,81,1089	0/0:17,0:16:42.09:0,42,539	0/0:18,0:18:48.16:0,48,656	0/0:24,0:24:69.22:0,69,929	0/0:14,0:14:42.14:0,42,574	0/0:18,0:18:54.09:0,54,655	0/0:25,0:25:72.24:0,72,983	0/0:27,0:27:78.26:0,78,1065	1/1:2,31:33:84.24:953,84,0	1/1:2,26:28:69.20:783,69,0	1/1:2,38:40:99:1211,108,0	1/1:0,30:30:75.21:851,75,0	0/0:17,0:17:48.06:0,48,568	0/0:24,0:24:72.24:0,72,983	0/1:21,2:23:1.80:2,0,754	0/0:24,0:24:66.20:0,66,884	0/0:20,0:20:54.18:0,54,737	0/0:25,0:25:69.22:0,69,928	0/0:17,0:17:45.15:0,45,616	0/0:20,0:20:48.16:0,48,656	0/0:30,0:30:87.29:0,87,1186	0/0:13,0:13:39.05:0,39,479
chr10	51759895	.	T	TTTG	4053.06	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=10.269;DP=739;FS=4.774;HRun=0;HaplotypeScore=156.4356;InbreedingCoeff=0.7428;MQ=65.75;MQ0=14;MQRankSum=-2.313;QD=11.61;ReadPosRankSum=5.599;VQSLOD=3.1950;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:35,0:33:73.06:500,73,0	1/1:7,0:7:19.56:154,20,0	0/0:50,0:17:11.92:0,12,166	0/1:62,0:20:15.48:15,0,104	0/0:28,0:28:56.59:0,57,544	0/0:34,0:34:31.06:0,31,401	0/0:15,0:15:23.81:0,24,186	0/0:29,0:28:60.74:0,61,483	0/0:18,0:18:42.96:0,43,343	0/0:25,0:25:62.28:0,62,560	0/0:25,0:25:55.36:0,55,511	1/1:14,0:14:3.57:51,4,0	1/1:26,0:25:20.71:274,21,0	0/0:19,0:19:42.92:0,43,311	0/1:27,0:27:13.66:400,0,14	1/1:38,0:35:88.20:687,88,0	1/1:28,0:26:60.16:407,60,0	0/1:23,0:23:8.10:200,0,8	0/0:21,0:20:52.78:0,53,468	0/0:29,0:27:33.55:0,34,348	0/0:4,0:4:9:0,9,80	1/1:31,0:29:48.16:563,48,0	1/1:16,16:32:48.56:636,49,0	1/1:8,14:25:11.35:166,11,0	0/0:27,0:27:62:0,62,510	0/0:38,0:38:83.12:0,83,691	0/0:17,0:17:38.68:0,39,275	0/0:11,0:10:23.82:0,24,195
chr10	51759897	.	T	TG	2687.02	PASS	AB=0.948;AC=17;AF=0.304;AN=56;BaseQRankSum=12.477;DP=738;FS=5.304;HRun=0;HaplotypeScore=105.1480;InbreedingCoeff=0.5718;MQ=63.57;MQ0=15;MQRankSum=-3.049;QD=9.46;ReadPosRankSum=8.399;VQSLOD=2.5127;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:34,0:32:78.09:273,0,78	0/1:6,1:7:18.80:64,0,19	0/0:52,0:17:20.19:0,20,198	0/0:59,0:17:12.77:0,13,137	0/0:26,0:26:69.19:0,69,600	0/0:33,0:33:88.52:0,89,610	0/0:15,0:14:28.91:0,29,219	0/0:30,0:28:67.76:0,68,530	0/0:17,0:17:49.40:0,49,405	0/0:25,0:25:72:0,72,632	0/0:26,0:26:60.10:0,60,522	0/1:15,0:15:11.32:61,0,11	1/1:5,21:25:8.01:87,8,0	0/0:19,0:19:54.24:0,54,414	0/1:26,0:26:31.66:205,0,32	1/1:34,2:33:67.92:496,68,0	1/1:15,14:27:70.10:595,70,0	1/1:14,6:20:24.15:290,24,0	0/0:22,0:21:61.98:0,62,526	0/0:31,0:29:63.30:0,63,455	0/0:4,0:4:9:0,9,81	1/1:8,24:30:19.23:398,19,0	1/1:22,11:32:22.53:333,23,0	0/1:22,4:26:7.82:79,0,8	0/0:29,0:29:68.76:0,69,594	0/0:38,0:38:99:0,101,820	0/0:17,0:17:44:0,44,340	0/0:11,0:10:23.92:0,24,198
chr10	51759902	.	T	TTG	1413.65	PASS	AB=0.962;AC=14;AF=0.250;AN=56;BaseQRankSum=12.552;DP=739;FS=2.240;HRun=0;HaplotypeScore=109.8728;InbreedingCoeff=0.4650;MQ=63.50;MQ0=15;MQRankSum=-0.520;QD=4.82;ReadPosRankSum=9.419;VQSLOD=1.7672;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:33:78.81:0,79,537	0/1:6,0:6:36.47:44,0,36	0/0:61,0:19:13.85:0,14,150	0/1:64,0:18:4.77:5,0,78	0/0:27,0:27:70.93:0,71,625	0/0:30,0:30:59.51:0,60,458	0/0:15,0:14:25.85:0,26,223	0/0:30,0:28:69.26:0,69,561	0/0:16,0:16:46.11:0,46,376	0/0:24,0:24:60.88:0,61,559	0/0:26,0:26:68.61:0,69,611	0/0:13,0:13:6.64:0,7,79	1/1:22,3:24:11.03:87,11,0	0/0:20,0:20:52.95:0,53,418	0/1:29,0:29:99:164,0,151	1/1:34,0:31:22.51:352,23,0	1/1:30,0:29:29.67:336,30,0	0/1:16,0:17:6.84:156,0,7	0/0:22,0:21:58.90:0,59,510	0/0:29,0:27:76.87:0,77,587	0/0:4,0:4:9:0,9,81	0/1:27,5:30:83.10:145,0,83	1/1:21,10:30:7.38:254,7,0	0/1:23,1:24:1.50:41,0,1	0/0:28,0:28:72.34:0,72,607	0/0:39,0:39:99:0,103,870	0/0:15,0:15:36.22:0,36,279	0/0:12,0:11:26.91:0,27,224
chr10	51759904	.	T	TG	199.39	PASS	AB=0.924;AC=5;AF=0.089;AN=56;BaseQRankSum=7.408;DP=733;FS=0.000;HRun=0;HaplotypeScore=97.6855;InbreedingCoeff=-0.0810;MQ=62.79;MQ0=15;MQRankSum=2.658;QD=1.57;ReadPosRankSum=3.654;VQSLOD=1.7106;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:33:82.81:0,83,564	0/0:6,0:6:15.26:0,15,84	0/0:60,0:18:23.27:0,23,195	0/0:63,0:17:12.52:0,13,116	0/0:28,0:28:74.34:0,74,654	0/0:29,0:29:77.03:0,77,532	0/0:15,0:14:32.87:0,33,263	0/0:31,0:29:69.73:0,70,578	0/0:15,0:15:43.44:0,43,356	0/0:21,0:21:58.26:0,58,536	0/0:26,0:26:68.92:0,69,599	0/1:5,8:13:8.88:9,0,70	0/1:25,0:24:17.46:17,0,18	0/0:19,0:19:56.09:0,56,454	0/0:29,0:29:73.22:0,73,429	0/0:33,0:30:67.71:0,68,315	0/0:31,0:29:32.08:0,32,255	0/0:17,0:17:25.03:0,25,142	0/0:22,0:21:59.01:0,59,505	0/0:28,0:26:75.71:0,76,585	0/0:4,0:4:9:0,9,81	0/1:33,0:31:63.02:195,0,63	0/1:30,0:29:27.66:83,0,28	0/1:26,0:26:0.19:0,0,66	0/0:28,0:28:73.42:0,73,626	0/0:38,0:38:99:0,111,965	0/0:15,0:15:38.79:0,39,309	0/0:13,0:12:29.91:0,30,245
chr10	51761696	.	A	ATTCTCTCTCT	2907.95	PASS	AB=1.000;AC=14;AF=0.250;AN=56;BaseQRankSum=6.388;DP=592;FS=4.228;HRun=0;HaplotypeScore=192.2908;InbreedingCoeff=0.3306;MQ=71.36;MQ0=14;MQRankSum=-8.092;QD=17.01;ReadPosRankSum=-5.127;VQSLOD=1.1964;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:20:9.22:0,9,431	1/1:9,0:9:5.97:155,6,0	0/0:32,0:23:13.65:0,14,205	0/0:37,0:17:19.85:0,20,204	0/0:22,0:21:45.01:0,45,836	0/0:27,0:27:59.36:0,59,932	0/0:22,0:22:35.27:0,35,1118	0/0:44,0:44:96.41:0,96,866	0/0:18,0:18:42.06:0,42,1056	0/0:24,0:24:55.57:0,56,787	0/0:18,0:17:47.57:0,48,460	0/1:18,0:18:87.75:171,0,88	0/1:19,0:18:74.04:137,0,74	0/0:15,0:15:33.04:0,33,621	1/1:16,1:16:18.06:812,18,0	1/1:12,2:14:21.07:973,21,0	1/1:12,11:26:1.35:463,1,0	0/1:13,0:13:8.06:206,0,8	0/0:15,0:14:32.80:0,33,450	0/0:34,0:34:80.95:0,81,1189	0/1:13,0:12:23.51:24,0,160	0/1:14,0:14:24.03:24,0,115	0/1:28,0:28:99:109,0,273	0/0:12,0:11:3.53:0,4,41	0/0:29,0:29:71.98:0,72,1227	0/0:23,0:23:53.87:0,54,1068	0/0:21,0:21:44.50:0,44,747	0/0:6,0:5:11.99:0,12,166
chr10	51761697	.	T	TTCTCTCTCTTTC	3023.21	PASS	AB=0.841;AC=16;AF=0.286;AN=56;BaseQRankSum=5.748;DP=627;FS=9.651;HRun=0;HaplotypeScore=227.8868;InbreedingCoeff=0.1833;MQ=68.82;MQ0=14;MQRankSum=-8.254;QD=12.60;ReadPosRankSum=-5.634;VQSLOD=-0.2435;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:22:14.20:0,14,513	1/1:1,8:10:8.94:220,9,0	0/0:30,0:21:12.06:0,12,203	0/0:37,0:17:19.85:0,20,204	0/0:18,0:21:45.01:0,45,919	0/0:26,0:28:56.17:0,56,1020	0/0:20,0:22:35.27:0,35,1230	0/0:42,0:43:96.41:0,96,872	0/0:14,0:18:45.05:0,45,1184	0/0:24,0:24:53.71:0,54,840	0/0:17,0:17:47.57:0,48,474	0/1:14,0:20:87.78:121,0,88	0/1:14,0:25:84:115,0,84	0/0:12,0:14:33.04:0,33,689	1/1:6,11:18:18.06:881,18,0	1/1:7,10:18:30.10:1208,30,0	0/1:26,0:26:1.67:309,0,2	0/1:14,0:15:26.80:127,0,27	0/1:14,0:17:1.45:1,0,468	0/0:34,0:34:83.95:0,84,1300	0/1:10,0:12:23.53:24,0,167	0/1:14,0:18:7.74:8,0,136	0/1:24,0:32:73.69:74,0,303	0/1:12,0:15:50.62:51,0,53	0/0:25,0:29:71.75:0,72,1327	0/0:24,0:24:20.06:0,20,1210	0/0:18,0:20:43.62:0,44,830	0/1:8,0:7:55.17:55,0,163
chr10	51761703	.	C	CTCTT	1365.92	PASS	AB=0.966;AC=11;AF=0.196;AN=56;BaseQRankSum=8.817;DP=662;FS=0.000;HRun=0;HaplotypeScore=149.6977;InbreedingCoeff=-0.2401;MQ=65.57;MQ0=15;MQRankSum=-7.227;QD=6.24;ReadPosRankSum=3.946;VQSLOD=1.9082;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:24:11.18:0,11,270	0/1:11,0:11:15.92:68,0,16	0/0:30,0:19:8.63:0,9,199	0/0:44,0:18:23.10:0,23,234	0/0:26,0:25:56.93:0,57,657	0/0:33,0:33:78.81:0,79,883	0/0:23,0:23:35.22:0,35,772	0/0:39,0:39:99:0,107,950	0/0:18,0:18:48.06:0,48,723	0/0:23,0:23:55.27:0,55,634	0/0:20,0:19:50.56:0,51,444	0/1:22,0:22:99:124,0,143	0/1:24,0:23:79.04:211,0,79	0/0:17,0:17:45.01:0,45,518	0/1:20,0:19:99:198,0,130	0/1:18,0:18:16.89:318,0,17	0/1:24,1:25:22.54:143,0,23	0/1:9,8:18:94.45:207,0,94	0/0:18,0:17:41.92:0,42,389	0/0:33,0:33:86.96:0,87,991	0/1:16,0:15:34.96:35,0,214	0/1:18,0:17:63.98:64,0,122	0/1:31,0:31:99:104,0,279	0/1:16,0:15:42.77:43,0,57	0/0:33,0:33:86.85:0,87,1024	0/0:25,0:25:63.03:0,63,828	0/0:21,0:21:53.49:0,53,611	0/0:13,0:12:32.63:0,33,277
chr10	51763106	.	GGTGTGTGTGTGT	G	821.35	PASS	AB=0.900;AC=13;AF=0.250;AN=52;BaseQRankSum=5.244;DP=492;FS=35.383;HRun=0;HaplotypeScore=156.2307;InbreedingCoeff=0.6164;MQ=63.53;MQ0=7;MQRankSum=-3.838;QD=8.13;ReadPosRankSum=-0.699;VQSLOD=1.3708;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:25:42.08:0,42,734	0/1:8,1:9:17.87:96,0,18	./.	./.	0/0:16,0:16:12.02:0,12,220	0/0:27,0:29:39.08:0,39,589	0/0:23,0:22:9.01:0,9,113	0/0:26,0:26:5.99:0,6,59	0/0:13,0:13:18.06:0,18,718	0/0:17,0:17:15.05:0,15,485	0/0:8,0:8:6.02:0,6,264	1/1:7,2:9:3.01:102,3,0	1/1:13,1:14:3.01:102,3,0	0/0:15,0:16:9.03:0,9,316	1/1:13,3:17:9.03:248,9,0	0/0:13,0:13:6:0,6,51	0/0:26,0:26:21.90:0,22,394	0/0:15,0:15:18.05:0,18,279	0/0:18,0:18:19.42:0,19,517	0/0:14,0:13:9.03:0,9,356	0/0:22,0:21:9.03:0,9,457	1/1:11,0:12:3.01:43,3,0	1/1:13,4:18:12.10:259,12,0	1/1:18,0:22:6.02:123,6,0	0/0:17,0:17:21.07:0,21,791	0/0:25,0:25:23.56:0,24,674	0/0:15,0:15:10.28:0,10,243	0/0:8,0:8:9.03:0,9,421
chr10	51763918	.	G	GTCC	1950.64	PASS	AB=0.590;AC=5;AF=0.089;AN=56;BaseQRankSum=-7.893;DP=707;FS=2.960;HRun=0;HaplotypeScore=97.5312;InbreedingCoeff=0.7633;MQ=73.07;MQ0=1;MQRankSum=-0.529;QD=30.48;ReadPosRankSum=-0.010;VQSLOD=3.9250;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:72.29:0,72,1258	1/1:3,12:15:17.83:364,18,0	0/0:36,0:21:22.88:0,23,282	0/0:33,0:28:27.01:0,27,363	0/0:28,0:28:63.21:0,63,893	0/0:24,0:24:51.16:0,51,703	0/0:25,0:24:36.10:0,36,492	0/0:26,0:26:33.01:0,33,347	0/0:24,0:24:60.16:0,60,830	0/0:20,0:20:57.17:0,57,779	0/0:23,0:23:45.09:0,45,579	0/0:14,0:14:33.11:0,33,470	0/0:26,0:26:54.16:0,54,747	0/0:26,0:26:60.16:0,60,831	1/1:3,23:26:57.20:1155,57,0	0/1:7,16:23:9.61:560,0,10	0/0:21,0:21:42.08:0,42,554	0/0:19,0:19:42.06:0,42,543	0/0:16,0:16:21.06:0,21,277	0/0:28,0:28:45.20:0,45,851	0/0:38,0:38:72.33:0,72,1240	0/0:21,0:21:27.09:0,27,385	0/0:22,0:22:54.18:0,54,765	0/0:33,0:33:65.21:0,65,976	0/0:25,0:25:66.19:0,66,917	0/0:34,0:34:84.26:0,84,1176	0/0:35,0:35:75.22:0,75,1030	0/0:5,0:5:6.02:0,6,85
chr10	51766645	.	C	CA	3990.72	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=13.026;DP=854;FS=1.783;HRun=3;HaplotypeScore=169.9596;InbreedingCoeff=0.9997;MQ=60.03;MQ0=6;MQRankSum=-6.330;QD=30.70;ReadPosRankSum=1.620;VQSLOD=2.6464;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:63,0:63:99:0,166,1977	0/0:11,0:11:30.09:0,30,360	0/0:38,0:25:60.17:0,60,707	0/0:19,0:11:33.09:0,33,385	0/0:26,0:26:72.22:0,72,864	0/0:21,0:21:63.16:0,63,732	0/0:32,0:32:87.25:0,87,1032	0/0:32,0:32:87.27:0,87,1044	0/0:26,0:26:69.21:0,69,828	0/0:54,0:54:99:0,147,1747	0/0:11,0:11:30.09:0,30,360	1/1:2,26:27:72.24:996,72,0	1/1:2,38:37:99:1405,102,0	0/0:32,0:32:87.24:0,87,1031	0/0:55,0:53:99:0,147,1752	0/0:36,0:35:99:0,99,1188	0/0:47,0:47:99:0,129,1547	0/0:22,0:22:48.11:0,48,559	0/0:25,0:24:69.19:0,69,815	0/0:23,0:23:63.18:0,63,745	0/0:49,0:49:99:0,144,1727	1/1:2,18:20:42.10:565,42,0	1/1:1,18:18:36.08:482,36,0	1/1:1,22:23:42.05:544,42,0	0/0:23,0:23:69.21:0,69,827	0/0:41,0:41:99:0,111,1332	0/0:23,0:23:69.20:0,69,815	0/0:15,0:15:45.14:0,45,540
chr10	51766706	.	AT	A	12251.97	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=23.361;DP=921;FS=0.000;HRun=2;HaplotypeScore=160.6064;InbreedingCoeff=0.9871;MQ=51.86;MQ0=12;MQRankSum=-7.712;QD=31.42;ReadPosRankSum=2.124;VQSLOD=4.4479;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,66:67:99:2219,172,0	1/1:0,13:13:33.11:428,33,0	0/0:30,0:4:9.02:0,9,126	0/0:27,0:4:12.04:0,12,179	0/0:20,0:20:60.20:0,60,899	0/0:17,0:17:51.17:0,51,763	0/0:32,0:32:93.31:0,93,1392	0/0:38,0:38:99:0,108,1601	0/0:30,0:30:90.29:0,90,1328	0/0:49,0:49:99:0,147,2153	0/0:18,0:18:51.17:0,51,762	1/1:2,27:28:66.21:856,66,0	1/1:0,40:37:93.30:1206,93,0	0/0:47,0:47:99:0,141,2090	1/1:1,50:49:99:1635,126,0	1/1:0,42:41:99:1440,111,0	1/1:3,38:40:74.41:1237,74,0	1/1:0,29:29:78.25:1012,78,0	0/0:32,0:32:93.23:0,93,1313	0/0:24,0:24:69.19:0,69,993	0/0:50,0:50:99:0,150,2206	1/1:0,25:24:54.18:700,54,0	1/1:1,26:26:63.20:817,63,0	1/1:3,23:26:54.63:701,55,0	0/0:35,0:35:99:0,99,1463	0/0:42,0:42:99:0,126,1867	0/0:30,0:30:90.30:0,90,1346	0/0:9,0:9:27.09:0,27,405
chr10	51767136	.	G	GC	5243.80	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=8.460;DP=679;FS=5.018;HRun=2;HaplotypeScore=76.4803;InbreedingCoeff=1.0000;MQ=86.17;MQ0=0;MQRankSum=-7.323;QD=38.56;ReadPosRankSum=1.713;VQSLOD=5.5061;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:81.25:0,81,1004	0/0:15,0:15:45.14:0,45,558	0/0:23,0:23:63.18:0,63,767	0/0:23,0:23:62.34:0,62,706	0/0:33,0:33:84.26:0,84,1041	0/0:25,0:25:75.24:0,75,930	0/0:21,0:21:60.19:0,60,743	0/0:21,0:21:57.18:0,57,706	0/0:25,0:25:75.24:0,75,930	0/0:31,0:31:90.28:0,90,1108	0/0:18,0:18:54.17:0,54,669	1/1:3,20:23:57.19:821,57,0	1/1:1,22:23:63.21:905,63,0	0/0:20,0:20:60.19:0,60,743	0/0:27,0:27:78.24:0,78,966	0/0:27,0:27:78.25:0,78,966	0/0:26,0:26:75.21:0,75,914	0/0:13,0:13:36.11:0,36,444	0/0:18,0:18:51.15:0,51,613	0/0:25,0:25:69.20:0,69,842	0/0:17,0:17:51.13:0,51,607	1/1:2,24:26:72.24:1036,72,0	1/1:1,29:30:78.26:1123,78,0	1/1:2,32:34:96.28:1359,96,0	0/0:24,0:24:72.23:0,72,893	0/0:32,0:32:96.30:0,96,1190	0/0:34,0:34:99:0,102,1264	0/0:14,0:14:42.13:0,42,521
chr10	51767244	.	TA	T	3899.82	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=14.260;DP=653;FS=6.123;HRun=11;HaplotypeScore=82.9693;InbreedingCoeff=0.9694;MQ=70.89;MQ0=1;MQRankSum=-1.310;QD=15.23;ReadPosRankSum=4.639;VQSLOD=4.2176;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,26:33:74.85:615,75,0	1/1:0,0:11:20.37:59,20,0	0/0:18,0:16:21.86:0,22,260	0/0:15,0:13:15.04:0,15,157	0/0:34,0:35:90.19:0,90,891	0/0:28,0:28:63.16:0,63,670	0/0:24,1:25:41.52:0,42,647	0/0:29,1:30:32.49:0,32,544	0/0:29,0:29:69.17:0,69,736	0/0:22,0:22:66.16:0,66,699	0/0:22,0:22:57.14:0,57,601	1/1:3,25:28:65.92:542,66,0	1/1:3,19:22:50.92:419,51,0	0/0:19,0:19:48.10:0,48,497	1/1:2,0:24:40.74:118,41,0	1/1:2,0:26:40.74:118,41,0	1/1:1,19:20:44.86:369,45,0	1/1:2,18:21:49.97:400,50,0	0/0:19,1:20:26.48:0,26,487	0/0:25,2:29:28.57:0,29,677	0/0:13,0:14:35.91:0,36,359	1/1:3,24:27:56.81:468,57,0	1/1:1,24:27:35.01:472,35,0	1/1:3,13:16:38.95:320,39,0	0/0:20,0:20:57.14:0,57,607	0/0:24,1:26:41.32:0,41,608	0/0:31,0:31:78.03:0,78,813	0/0:11,0:11:2.51:0,3,231
chr10	51767938	.	A	ACACAC	457.59	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=5.726;DP=644;FS=0.000;HRun=0;HaplotypeScore=155.2955;InbreedingCoeff=-0.0883;MQ=68.75;MQ0=23;MQRankSum=-0.283;QD=2.08;ReadPosRankSum=-5.322;VQSLOD=0.1797;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,22:33:9.03:196,9,0	0/1:8,0:8:70.71:71,0,131	0/0:37,0:16:33.11:0,33,419	0/0:40,0:23:24.08:0,24,305	0/0:19,0:19:30.08:0,30,429	0/1:20,0:20:27.95:28,0,418	0/0:24,0:24:47.98:0,48,612	0/0:20,0:20:48.62:0,49,601	0/1:22,0:22:99:110,0,292	0/0:27,0:27:34.57:0,35,625	0/1:9,0:8:6.06:6,0,80	0/0:23,0:23:33.55:0,34,405	0/0:24,0:24:60.19:0,60,785	0/1:15,0:15:1.15:1,0,298	0/1:26,0:26:58.58:59,0,305	0/1:17,0:17:38.70:39,0,204	0/0:40,0:35:31.74:0,32,241	0/0:25,0:20:24.15:0,24,175	0/0:11,0:11:14.38:0,14,190	0/0:13,0:13:23.55:0,24,276	0/0:41,0:39:6.71:0,7,637	0/0:26,0:26:39.11:0,39,497	0/0:23,0:23:39.11:0,39,493	0/0:31,0:31:38.16:0,38,479	0/1:18,0:18:2.30:2,0,268	0/1:13,0:13:35.57:36,0,274	0/1:21,0:20:33.59:34,0,421	0/1:13,0:13:25.16:25,0,32
chr10	51767943	.	CCACACACACACACACACA	C	3931.27	PASS	AB=0.689;AC=9;AF=0.167;AN=54;BaseQRankSum=5.263;DP=676;FS=13.275;HRun=0;HaplotypeScore=252.8946;InbreedingCoeff=0.7604;MQ=63.52;MQ0=29;MQRankSum=-6.805;QD=30.71;ReadPosRankSum=2.056;VQSLOD=1.2885;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:36:12.04:0,12,804	0/0:6,0:10:12.72:0,13,866	./.	0/0:35,0:18:6.02:0,6,183	0/0:18,0:18:33.11:0,33,2317	0/0:18,0:27:26.29:0,26,1834	0/0:20,0:22:21.07:0,21,1046	0/0:21,0:20:12.04:0,12,648	0/0:14,0:23:33.11:0,33,2248	0/0:26,0:27:57.20:0,57,3668	0/0:8,0:10:9.03:0,9,575	1/1:13,9:23:15.05:648,15,0	1/1:15,8:24:21.07:955,21,0	0/0:13,0:19:18.06:0,18,1008	0/0:19,0:27:33.10:0,33,1861	0/0:9,0:17:9.50:0,10,711	0/0:37,0:32:45.15:0,45,2416	0/0:21,0:19:27.09:0,27,1454	0/0:15,0:15:21.07:0,21,1199	0/0:13,0:12:14.98:0,15,970	0/0:46,0:46:57.20:0,57,3616	1/1:14,14:28:15.05:698,15,0	1/1:11,10:22:18.06:812,18,0	0/1:17,13:31:15.75:819,0,16	0/0:13,0:21:18.06:0,18,1329	0/0:21,0:19:35.71:0,36,1911	0/0:20,0:22:27.09:0,27,1468	0/0:6,0:10:6.02:0,6,478
chr10	51767948	.	CACA	C	1167.59	PASS	AB=0.933;AC=8;AF=0.143;AN=56;BaseQRankSum=9.408;DP=671;FS=25.042;HRun=0;HaplotypeScore=118.6946;InbreedingCoeff=0.1105;MQ=53.56;MQ0=32;MQRankSum=-5.643;QD=6.49;ReadPosRankSum=7.080;VQSLOD=0.7796;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:48:13.01:0,13,450	0/0:11,0:11:18.74:0,19,315	0/0:33,0:12:33.11:0,33,419	0/0:26,0:9:24.08:0,24,305	0/0:21,0:21:48.05:0,48,851	0/0:26,0:26:50.85:0,51,759	0/0:22,0:21:50.91:0,51,617	0/0:24,0:21:60.66:0,61,821	0/0:24,0:24:60.18:0,60,944	0/0:30,0:30:85.38:0,85,1452	0/0:15,0:14:18.06:0,18,284	0/1:22,0:22:19.09:19,0,210	0/1:23,0:23:34.14:34,0,437	0/0:21,0:21:42.12:0,42,604	0/0:23,0:23:43.57:0,44,731	0/0:18,0:18:30.08:0,30,488	1/1:4,28:29:44.66:818,45,0	0/1:8,14:20:42.54:332,0,43	0/0:15,0:15:37.88:0,38,562	0/0:13,0:12:30.08:0,30,425	0/0:45,0:43:87.29:0,87,1425	0/1:26,0:26:31.93:32,0,288	0/1:22,0:21:39.93:40,0,251	0/1:28,0:28:34.33:34,0,230	0/0:21,0:21:39.12:0,39,653	0/0:23,0:20:57.08:0,57,803	0/0:22,0:20:51.13:0,51,736	0/0:5,0:5:6.02:0,6,125
chr10	51768641	.	TC	T	2405.94	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=11.742;DP=700;FS=1.886;HRun=7;HaplotypeScore=92.4725;InbreedingCoeff=0.9861;MQ=88.58;MQ0=0;MQRankSum=-0.204;QD=20.74;ReadPosRankSum=2.814;VQSLOD=3.3026;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,105,1249	0/0:8,0:8:23.94:0,24,246	0/0:20,0:20:49.44:0,49,506	0/0:35,0:35:80.05:0,80,936	0/0:13,0:13:39.12:0,39,490	0/0:23,0:23:63.18:0,63,768	0/0:36,0:36:99:0,102,1197	0/0:31,0:31:87.16:0,87,998	0/0:32,0:32:96.20:0,96,1135	0/0:28,0:28:81.21:0,81,972	0/0:16,0:16:48.13:0,48,578	1/1:2,20:22:54.02:518,54,0	1/1:3,21:24:45.04:442,45,0	0/0:31,0:31:90.26:0,90,1105	0/0:29,0:29:84.23:0,84,1002	0/0:26,0:26:78.21:0,78,930	0/0:45,0:45:99:0,126,1469	0/0:16,0:16:42.07:0,42,491	0/0:23,0:23:51.12:0,51,604	0/0:22,0:22:60.19:0,60,752	0/0:26,0:26:75.20:0,75,905	1/1:4,16:20:47.81:453,48,0	1/1:2,15:17:39.01:372,39,0	1/1:4,29:33:81.13:795,81,0	0/0:20,0:20:60.19:0,60,755	0/0:32,0:32:84.21:0,84,1024	0/0:29,0:27:81.20:0,81,957	0/0:3,0:3:9.03:0,9,113
chr10	51770212	.	TGAG	T	12461.23	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=18.913;DP=688;FS=2.896;HRun=0;HaplotypeScore=123.9035;InbreedingCoeff=0.9979;MQ=90.12;MQ0=0;MQRankSum=-5.253;QD=44.66;ReadPosRankSum=5.968;VQSLOD=6.4165;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,35:35:84.29:1481,84,0	1/1:1,9:10:24.06:391,24,0	0/0:28,0:28:81.25:0,81,1753	0/0:29,0:29:87.24:0,87,1965	0/0:25,0:25:75.26:0,75,1773	0/0:22,0:22:66.23:0,66,1546	0/0:18,0:18:54.19:0,54,1235	0/0:37,0:37:99:0,111,2587	0/0:24,1:25:16.32:0,16,1503	0/0:20,0:20:60.21:0,60,1420	0/0:17,0:17:51.18:0,51,1206	1/1:0,23:23:66.23:1164,66,0	1/1:2,26:28:75.24:1291,75,0	0/0:22,0:22:63.22:0,63,1485	1/1:1,24:25:63.22:1110,63,0	1/1:1,23:24:69.24:1207,69,0	1/1:1,24:25:60.21:1058,60,0	1/1:2,27:29:72.22:1239,72,0	0/0:20,0:20:60.21:0,60,1402	0/0:24,0:24:69.24:0,69,1601	0/0:31,0:31:90.27:0,90,2071	1/1:2,24:26:69.24:1204,69,0	1/1:1,20:21:54.19:951,54,0	1/1:3,30:33:78.27:1367,78,0	0/0:26,0:26:78.27:0,78,1845	0/0:28,0:28:84.29:0,84,1960	0/0:27,0:27:81.28:0,81,1910	0/0:10,0:10:30.10:0,30,710
chr10	51770213	.	G	GT	4503.35	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=19.423;DP=681;FS=2.466;HRun=1;HaplotypeScore=124.4398;InbreedingCoeff=0.9996;MQ=90.47;MQ0=0;MQRankSum=-6.044;QD=16.56;ReadPosRankSum=5.629;VQSLOD=5.3555;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:35,0:35:81.76:496,82,0	1/1:9,1:10:23.36:206,23,0	0/0:28,0:28:80.91:0,81,1067	0/0:29,0:29:87.10:0,87,1131	0/0:25,0:25:75.25:0,75,1048	0/0:22,0:22:66.22:0,66,920	0/0:18,0:18:54.18:0,54,753	0/0:37,0:37:99:0,111,1547	0/0:24,0:24:49.40:0,49,884	0/0:20,0:20:60.20:0,60,840	0/0:17,0:17:51.17:0,51,711	1/1:23,0:23:60.25:388,60,0	1/1:26,1:27:67.31:465,67,0	0/0:22,0:22:63.19:0,63,863	1/1:24,0:24:61.69:409,62,0	1/1:23,1:24:67.08:474,67,0	1/1:24,0:24:58.27:352,58,0	1/1:27,1:28:70.76:491,71,0	0/0:21,0:21:60.20:0,60,838	0/0:23,0:23:66.22:0,66,923	0/0:30,0:30:87.29:0,87,1213	1/1:25,0:26:64.41:378,64,0	1/1:20,0:20:48.25:324,48,0	1/1:30,1:31:76.10:520,76,0	0/0:26,0:26:78.26:0,78,1090	0/0:29,0:29:84.28:0,84,1172	0/0:28,0:28:81.27:0,81,1129	0/0:10,0:10:30.10:0,30,420
chr10	51771377	.	AACACACACACACACAC	A	4691.73	PASS	AB=0.850;AC=10;AF=0.179;AN=56;BaseQRankSum=7.903;DP=588;FS=2.051;HRun=0;HaplotypeScore=241.0872;InbreedingCoeff=0.7199;MQ=62.01;MQ0=10;MQRankSum=-8.502;QD=41.16;ReadPosRankSum=2.604;VQSLOD=4.3941;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:28:24.08:0,24,1254	0/0:6,0:23:42.14:0,42,746	0/0:25,0:12:9:0,9,106	0/0:28,0:19:6.02:0,6,91	0/0:26,0:31:60.21:0,60,3341	0/0:20,0:21:33.11:0,33,2249	0/0:21,0:21:39.12:0,39,2188	0/0:25,0:25:30.10:0,30,1340	0/0:27,0:27:51.18:0,51,3547	0/0:23,0:23:45.15:0,45,3039	0/0:20,0:20:30.10:0,30,1965	1/1:6,9:15:24.04:946,24,0	1/1:8,20:29:32.87:1427,33,0	0/1:8,1:9:99:108,0,1423	0/0:7,0:19:20.56:0,21,416	0/0:6,0:18:39.11:0,39,769	0/0:23,0:25:54.66:0,55,3279	0/0:12,0:11:27.09:0,27,1711	0/0:15,0:14:24.08:0,24,1602	0/0:17,0:17:33.11:0,33,2102	0/0:18,0:20:30.10:0,30,1586	1/1:8,15:23:39:1267,39,0	1/1:9,12:22:25.15:817,25,0	0/1:12,4:15:28.38:126,0,28	0/0:23,0:23:39.13:0,39,2475	0/0:11,0:13:30.10:0,30,2023	0/0:27,0:27:57.20:0,57,3598	0/0:5,0:9:16.61:0,17,943
chr10	51772652	.	CA	C	5181.03	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=14.625;DP=755;FS=2.051;HRun=1;HaplotypeScore=87.3844;InbreedingCoeff=1.0000;MQ=97.04;MQ0=0;MQRankSum=-7.690;QD=37.54;ReadPosRankSum=4.566;VQSLOD=5.3347;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,154,2423	0/0:16,0:16:48.15:0,48,744	0/0:31,0:31:90.31:0,90,1426	0/0:42,0:42:99:0,126,1950	0/0:25,0:25:72.23:0,72,1119	0/0:24,0:24:72.23:0,72,1128	0/0:21,0:21:63.21:0,63,1007	0/0:31,0:31:90.29:0,90,1395	0/0:25,0:25:75.26:0,75,1192	0/0:19,0:19:57.19:0,57,912	0/0:27,0:27:78.27:0,78,1247	1/1:0,24:24:69.23:955,69,0	1/1:0,29:29:78.26:1081,78,0	0/0:27,0:27:81.28:0,81,1290	0/0:27,0:27:78.26:0,78,1225	0/0:33,0:33:99:0,99,1558	0/0:26,0:26:78.24:0,78,1217	0/0:13,0:13:39.13:0,39,614	0/0:16,0:16:48.16:0,48,768	0/0:33,0:33:99:0,99,1555	0/0:33,0:33:99:0,99,1556	1/1:0,25:25:63.21:880,63,0	1/1:0,33:33:90.30:1258,90,0	1/1:0,27:27:72.24:1006,72,0	0/0:21,0:21:63.21:0,63,1004	0/0:21,0:21:63.21:0,63,987	0/0:38,0:37:99:0,114,1820	0/0:16,0:16:48.16:0,48,765
chr10	51773304	.	A	ATGT	5032.42	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=19.412;DP=644;FS=3.058;HRun=0;HaplotypeScore=177.6748;InbreedingCoeff=0.9974;MQ=77.55;MQ0=1;MQRankSum=-17.971;QD=22.47;ReadPosRankSum=1.099;VQSLOD=4.4012;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:26,1:27:71.16:676,71,0	1/1:10,0:10:28.87:300,29,0	0/0:26,0:26:57.43:0,57,972	0/0:20,0:19:27.11:0,27,507	0/0:34,0:34:99:0,102,1788	0/0:18,0:18:51.17:0,51,900	0/0:22,0:22:63.17:0,63,1028	0/0:25,0:25:69.22:0,69,1181	0/0:16,0:16:45.15:0,45,789	0/0:31,0:31:90.31:0,90,1584	0/0:22,0:22:66.23:0,66,1163	1/1:25,0:25:73.49:597,73,0	1/1:26,0:26:70.53:556,71,0	0/0:20,0:20:60.21:0,60,1050	1/1:13,3:16:40.98:295,41,0	1/1:29,0:29:84.72:534,85,0	1/1:11,1:12:35.46:320,35,0	1/1:12,1:13:38.76:403,39,0	0/0:24,0:24:69.20:0,69,1124	0/0:23,0:23:48.69:0,49,1023	0/0:26,0:26:72.25:0,72,1262	1/1:34,0:34:89.32:762,89,0	1/1:21,0:21:55.38:462,55,0	1/1:10,1:11:14.96:127,15,0	0/0:22,0:22:66.23:0,66,1162	0/0:28,0:28:81.28:0,81,1424	0/0:37,0:37:99:0,111,1914	0/0:26,0:26:63.22:0,63,1112
chr10	51773305	.	TCCTCCTCA	T	12907.70	PASS	AB=0.957;AC=23;AF=0.411;AN=56;BaseQRankSum=19.721;DP=635;FS=7.682;HRun=0;HaplotypeScore=213.5455;InbreedingCoeff=0.9464;MQ=78.04;MQ0=1;MQRankSum=-17.857;QD=53.56;ReadPosRankSum=1.887;VQSLOD=3.6037;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,20:27:68.03:1311,68,0	1/1:3,7:10:29.30:561,29,0	0/0:25,0:26:58.13:0,58,2642	0/0:21,0:20:38.76:0,39,1486	0/0:34,0:34:99:0,102,4520	0/0:18,0:18:54.19:0,54,2434	0/0:21,0:21:63.19:0,63,2690	0/0:26,0:26:75.25:0,75,2981	0/0:16,0:16:48.16:0,48,2091	0/0:30,0:30:90.31:0,90,4052	0/0:22,0:22:66.23:0,66,3042	1/1:1,24:25:73.13:1647,73,0	1/1:4,21:26:73.50:1540,73,0	0/0:20,0:20:60.21:0,60,2611	1/1:3,13:16:42.14:952,42,0	1/1:2,27:29:84.05:1891,84,0	1/1:2,10:12:36.12:823,36,0	1/1:3,10:13:39.11:876,39,0	0/0:24,0:24:72.22:0,72,2745	0/1:21,1:22:3.46:3,0,2261	0/0:25,0:25:75.26:0,75,3279	1/1:5,26:31:92.21:1821,92,0	1/1:2,18:20:59.40:1218,59,0	1/1:3,7:10:14.79:263,15,0	0/0:23,0:23:69.24:0,69,3129	0/0:28,0:28:84.29:0,84,3764	0/0:37,0:37:99:0,111,4881	0/0:23,0:23:69.24:0,69,3052
chr10	51773316	.	T	TC	4677.20	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=18.927;DP=650;FS=5.813;HRun=1;HaplotypeScore=154.2402;InbreedingCoeff=0.9962;MQ=78.04;MQ0=1;MQRankSum=-19.118;QD=21.26;ReadPosRankSum=3.433;VQSLOD=4.9940;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,24:28:68.77:614,69,0	1/1:1,7:8:23.81:188,24,0	0/0:34,0:33:93.22:0,93,1149	0/0:18,0:17:45.12:0,45,558	0/0:35,0:35:96.28:0,96,1213	0/0:20,0:20:57.16:0,57,724	0/0:26,0:26:78.22:0,78,982	0/0:27,0:27:78.23:0,78,978	0/0:15,0:15:45.15:0,45,583	0/0:33,0:33:99:0,99,1269	0/0:23,0:23:66.21:0,66,857	1/1:1,24:25:74.57:569,75,0	1/1:4,22:26:76.73:615,77,0	0/0:18,0:18:54.18:0,54,698	1/1:5,13:18:50.79:421,51,0	1/1:1,27:28:83.75:668,84,0	1/1:2,10:12:34.95:265,35,0	1/1:3,10:13:17.21:267,17,0	0/0:22,0:22:60.15:0,60,723	0/0:19,1:20:32.36:0,32,619	0/0:24,0:24:72.23:0,72,934	1/1:4,26:30:76.86:535,77,0	1/1:2,19:21:52.61:407,53,0	1/1:4,7:11:15.52:128,16,0	0/0:25,0:25:72.22:0,72,921	0/0:32,0:32:96.11:0,96,1170	0/0:35,0:35:99:0,105,1361	0/0:23,0:23:69.22:0,69,894
chr10	51773737	.	ATGTGTG	A	1121.97	PASS	AB=0.934;AC=20;AF=0.417;AN=48;BaseQRankSum=7.742;DP=620;FS=7.095;HRun=0;HaplotypeScore=156.5177;InbreedingCoeff=0.4831;MQ=61.51;MQ0=17;MQRankSum=-5.978;QD=4.08;ReadPosRankSum=1.609;VQSLOD=2.1581;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:34:9.03:123,9,0	./.	./.	./.	0/0:22,0:22:12.04:0,12,320	0/0:16,0:15:3.48:0,3,66	0/0:21,0:21:12.04:0,12,353	0/0:28,0:27:0.89:0,1,2	./.	0/0:26,0:25:15.52:0,16,394	0/0:9,0:9:12.03:0,12,239	1/1:20,3:22:5.02:65,5,0	1/1:18,4:21:18.51:324,19,0	0/0:12,0:14:22.99:0,23,503	1/1:15,0:20:11.64:87,12,0	1/1:11,0:19:17.79:195,18,0	0/1:27,0:28:41.73:74,0,42	1/1:16,0:17:3.01:42,3,0	0/0:16,0:17:6.01:0,6,64	0/1:9,0:10:4.89:5,0,338	0/0:51,0:51:31.17:0,31,733	1/1:15,1:18:0.47:1,0,0	1/1:20,2:23:12:146,12,0	0/1:31,5:36:8.44:218,0,8	0/0:23,0:23:15.05:0,15,389	0/0:23,0:21:9.03:0,9,201	0/1:22,0:24:3.57:4,0,347	0/0:7,0:12:3.01:0,3,38
chr10	51775507	.	C	CTCATTCATTCAT	1561.13	PASS	AB=0.816;AC=6;AF=0.107;AN=56;BaseQRankSum=2.228;DP=704;FS=4.968;HRun=0;HaplotypeScore=227.6336;InbreedingCoeff=0.5683;MQ=68.62;MQ0=1;MQRankSum=-4.792;QD=16.26;ReadPosRankSum=-1.995;VQSLOD=1.8887;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:15,1:36:24.80:619,0,25	0/0:8,0:8:15.04:0,15,444	0/1:20,0:19:9.90:10,0,267	0/0:17,0:15:4.33:0,4,105	0/0:24,0:24:54.05:0,54,1579	0/0:27,0:27:60.16:0,60,1756	0/0:21,0:21:39.08:0,39,997	0/0:38,0:37:62.64:0,63,1350	0/0:26,0:26:63.17:0,63,1855	0/0:29,0:29:60.16:0,60,1520	0/0:15,0:15:36.12:0,36,1150	0/0:33,0:33:75.20:0,75,2223	0/0:24,0:24:54.17:0,54,1696	0/0:18,0:18:39.10:0,39,1111	0/0:33,0:33:66.16:0,66,1858	0/0:29,0:29:69.18:0,69,2131	1/1:12,7:25:11.01:450,11,0	1/1:6,4:15:12.04:608,12,0	0/0:27,0:27:36.06:0,36,962	0/0:35,0:35:87.16:0,87,2330	0/0:27,0:27:72.17:0,72,2098	0/0:26,0:26:78.20:0,78,2111	0/0:34,0:34:78.21:0,78,2224	0/0:33,0:33:80.84:0,81,2161	0/0:23,0:23:63.17:0,63,1833	0/0:28,0:28:63.07:0,63,1928	0/0:22,0:22:63.16:0,63,1849	0/0:11,0:11:24.08:0,24,793
chr10	51776442	.	ATGTGTGTG	A	602.66	PASS	AB=0.969;AC=9;AF=0.173;AN=52;BaseQRankSum=4.583;DP=584;FS=0.000;HRun=0;HaplotypeScore=140.4898;InbreedingCoeff=0.6607;MQ=58.29;MQ0=18;MQRankSum=-4.225;QD=5.97;ReadPosRankSum=1.232;VQSLOD=2.4903;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:29:13.29:0,13,344	0/0:10,0:10:15.01:0,15,585	./.	./.	0/0:31,0:31:39.13:0,39,1327	0/0:22,0:22:14.27:0,14,872	0/0:16,0:17:14.25:0,14,459	0/0:33,0:30:12.03:0,12,174	0/0:18,0:19:36.12:0,36,1261	0/1:30,1:30:43.12:43,0,675	0/0:22,0:21:21.07:0,21,629	1/1:7,3:9:6.02:139,6,0	1/1:15,4:19:15.05:354,15,0	0/0:20,0:20:24.08:0,24,803	0/0:16,0:28:36.12:0,36,1220	0/0:16,0:19:21.05:0,21,730	0/0:16,0:16:21.04:0,21,753	0/0:15,0:16:18.53:0,19,574	0/0:19,0:18:24.92:0,25,686	0/0:18,0:17:15.05:0,15,477	0/0:24,0:24:24.08:0,24,659	1/1:21,0:22:6.02:130,6,0	1/1:11,7:18:2.85:74,3,0	0/0:22,2:23:3.01:0,3,34	0/0:12,0:13:18.06:0,18,570	0/0:23,0:23:30.09:0,30,867	0/0:21,0:23:26.87:0,27,841	0/0:12,0:12:9.03:0,9,349
chr10	51776887	.	ATAT	A	2192.76	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=10.740;DP=615;FS=0.000;HRun=0;HaplotypeScore=86.4814;InbreedingCoeff=0.9956;MQ=77.86;MQ0=0;MQRankSum=-4.967;QD=39.16;ReadPosRankSum=2.254;VQSLOD=4.4667;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,23:30:73.80:1187,74,0	0/0:11,0:11:24.08:0,24,544	0/0:12,0:12:36.09:0,36,727	0/0:16,0:16:39.08:0,39,692	0/0:36,0:35:96.33:0,96,2123	0/0:22,0:22:63.20:0,63,1384	0/0:25,0:25:75.26:0,75,1664	0/0:39,0:39:99:0,111,2437	0/0:17,0:17:45.15:0,45,999	0/0:21,0:21:60.21:0,60,1321	0/0:24,0:24:63.22:0,63,1410	0/0:21,0:21:57.20:0,57,1255	0/0:22,0:22:63.22:0,63,1425	0/0:16,0:16:48.15:0,48,1044	0/0:31,0:31:90.31:0,90,2039	0/0:16,0:16:48.15:0,48,1046	1/1:0,19:19:51.17:848,51,0	1/1:0,7:7:18.06:300,18,0	0/0:25,0:25:72.19:0,72,1477	0/0:20,0:20:57.18:0,57,1223	0/0:17,0:17:48.16:0,48,1070	0/0:25,0:25:63.20:0,63,1384	0/0:22,0:22:63.20:0,63,1302	0/0:8,0:8:24.08:0,24,544	0/0:34,0:34:96.33:0,96,2174	0/0:26,0:26:78.24:0,78,1629	0/0:30,0:30:84.28:0,84,1859	0/0:23,0:23:66.23:0,66,1495
chr10	51777024	.	T	TC	5010.08	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=5.990;DP=512;FS=7.304;HRun=1;HaplotypeScore=67.0099;InbreedingCoeff=0.9973;MQ=92.96;MQ0=0;MQRankSum=-5.456;QD=37.67;ReadPosRankSum=1.153;VQSLOD=5.1826;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,21:23:54.18:808,54,0	0/0:7,0:7:21.07:0,21,272	0/0:22,0:22:63.13:0,63,773	0/0:25,0:25:60.15:0,60,732	0/0:11,0:11:30.10:0,30,389	0/0:24,0:24:72.19:0,72,891	0/0:26,0:26:78.17:0,78,990	0/0:29,0:29:78.22:0,78,966	0/0:19,0:19:57.16:0,57,711	0/0:21,0:21:63.20:0,63,809	0/0:15,0:15:45.14:0,45,572	1/1:0,12:12:33.11:493,33,0	1/1:0,11:11:30.10:441,30,0	0/0:18,0:18:54.16:0,54,686	0/0:23,0:23:66.20:0,66,842	0/0:19,0:19:57.18:0,57,727	1/1:2,26:28:72.24:1078,72,0	1/1:0,10:10:24.03:333,24,0	0/0:14,0:14:42.14:0,42,545	0/0:19,0:19:57.12:0,57,718	0/0:16,0:16:45.15:0,45,584	1/1:2,18:20:51.09:735,51,0	1/1:0,15:15:42.14:628,42,0	1/1:2,12:13:33.11:494,33,0	0/0:17,0:17:48.16:0,48,622	0/0:24,0:24:72.19:0,72,915	0/0:22,0:22:63.20:0,63,817	0/0:8,0:8:18.04:0,18,217
chr10	51777142	.	G	GT	1430.33	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=9.586;DP=427;FS=2.696;HRun=3;HaplotypeScore=56.7103;InbreedingCoeff=0.9866;MQ=71.61;MQ0=0;MQRankSum=-4.118;QD=18.58;ReadPosRankSum=3.527;VQSLOD=3.3345;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:57.14:0,57,666	0/0:8,0:8:21.04:0,21,236	0/0:14,0:9:26.96:0,27,286	0/0:20,0:17:20.79:0,21,410	0/0:21,0:21:57.17:0,57,680	0/0:11,0:11:33.05:0,33,375	0/0:29,0:29:72.13:0,72,817	0/0:16,0:16:42.12:0,42,493	0/0:14,0:14:39.12:0,39,465	0/0:14,0:14:42.13:0,42,503	0/0:13,0:13:33.09:0,33,385	1/1:5,11:16:32.06:326,32,0	1/1:2,8:10:18.93:191,19,0	0/0:4,0:4:12.04:0,12,144	0/0:9,0:9:24.07:0,24,288	0/0:8,0:8:24.07:0,24,288	0/0:15,0:15:42.11:0,42,488	0/0:10,0:10:24.07:0,24,286	0/0:9,0:9:24.03:0,24,272	0/0:18,0:18:54.17:0,54,647	0/0:23,0:23:60.18:0,60,718	1/1:3,13:16:29.54:286,30,0	1/1:2,10:12:29.22:341,29,0	1/1:5,18:23:31.47:461,31,0	0/0:17,0:17:48.09:0,48,546	0/0:19,0:19:45.14:0,45,538	0/0:23,0:23:60.15:0,60,692	0/0:12,0:12:36.11:0,36,429
chr10	51777146	.	C	CA	1498.60	PASS	AB=0.929;AC=11;AF=0.196;AN=56;BaseQRankSum=8.901;DP=440;FS=0.000;HRun=9;HaplotypeScore=60.4821;InbreedingCoeff=0.8209;MQ=70.58;MQ0=1;MQRankSum=-4.347;QD=17.03;ReadPosRankSum=1.404;VQSLOD=3.6861;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:50.93:0,51,430	0/0:7,0:7:18:0,18,156	0/0:16,0:10:26.03:0,26,214	0/0:27,0:18:1.92:0,2,106	0/0:22,2:24:25.20:0,25,407	0/1:12,1:13:6.20:6,0,181	0/0:24,1:25:29.80:0,30,487	0/0:16,0:16:6.10:0,6,231	0/0:15,0:15:35.97:0,36,312	0/0:16,0:16:47.99:0,48,416	0/0:12,0:12:26.99:0,27,234	1/1:15,0:15:34.62:348,35,0	1/1:9,0:9:16.32:194,16,0	0/0:11,0:11:17.92:0,18,151	0/0:10,0:10:22.04:0,22,205	0/0:10,0:10:20.98:0,21,182	0/0:15,0:15:35.95:0,36,305	0/0:9,0:9:20.97:0,21,178	0/0:9,0:9:20.96:0,21,180	0/0:18,0:18:41.99:0,42,364	0/0:21,0:21:53.97:0,54,468	1/1:17,0:17:31.29:306,31,0	1/1:13,0:13:36.09:384,36,0	1/1:21,0:21:20.02:433,20,0	0/0:15,1:17:7.84:0,8,285	0/0:18,0:18:38.97:0,39,338	0/0:20,0:20:41.92:0,42,357	0/0:15,0:15:23.96:0,24,208
chr10	51777176	.	AGAG	A	1153.52	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=7.613;DP=372;FS=0.814;HRun=0;HaplotypeScore=65.9202;InbreedingCoeff=0.8920;MQ=55.31;MQ0=13;MQRankSum=-3.033;QD=19.55;ReadPosRankSum=-0.522;VQSLOD=3.3177;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:30.10:0,30,548	0/0:5,0:5:12.04:0,12,249	0/0:23,0:8:6.02:0,6,110	0/0:22,0:9:6.65:0,7,148	0/0:20,0:20:38.73:0,39,682	0/0:11,0:11:27.09:0,27,521	0/0:19,0:19:51.11:0,51,891	0/0:9,0:9:9:0,9,113	0/0:10,0:10:24.04:0,24,417	0/0:18,0:18:36.12:0,36,734	0/0:6,0:6:15.05:0,15,306	1/1:3,7:10:8.17:286,8,0	1/1:5,5:10:14.60:207,15,0	0/0:13,0:13:36.12:0,36,733	0/0:12,0:11:20.63:0,21,288	0/0:11,0:10:27.09:0,27,559	0/0:13,0:12:25.49:0,25,413	0/0:7,0:6:14.84:0,15,240	0/0:10,0:8:15.04:0,15,259	0/0:12,0:11:18.05:0,18,304	0/0:19,0:18:51.13:0,51,894	1/1:9,7:15:21.14:401,21,0	1/1:5,3:7:12.04:170,12,0	1/1:10,5:14:23.89:255,24,0	0/0:17,0:16:36.11:0,36,686	0/0:18,0:16:42.12:0,42,704	0/0:12,0:12:27.37:0,27,421	0/0:11,0:11:27.09:0,27,505
chr10	51777941	.	ATGACCATGACCAT	A	1450.97	PASS	AB=0.835;AC=6;AF=0.107;AN=56;BaseQRankSum=7.125;DP=513;FS=22.112;HRun=0;HaplotypeScore=184.9633;InbreedingCoeff=-0.1210;MQ=52.87;MQ0=14;MQRankSum=-6.341;QD=18.14;ReadPosRankSum=1.487;VQSLOD=1.0514;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:20.86:0,21,284	0/0:10,0:10:30.10:0,30,1246	0/0:22,0:13:39.08:0,39,564	0/0:27,0:15:35.23:0,35,466	0/0:19,0:19:54.18:0,54,1996	0/0:14,0:14:42.14:0,42,1792	0/0:20,0:20:60.20:0,60,2126	0/0:26,0:24:69.20:0,69,1012	0/0:20,0:20:60.21:0,60,2576	0/0:20,0:18:54.12:0,54,1881	0/0:12,0:12:30.10:0,30,1192	0/1:15,3:17:99:341,0,279	0/1:12,4:16:94.74:394,0,95	0/0:24,0:24:69.22:0,69,3129	0/0:24,0:24:72.24:0,72,3395	0/0:11,0:11:33.11:0,33,1277	0/0:9,0:8:15.02:0,15,185	0/1:11,0:11:60.99:61,0,241	0/0:11,0:10:30.10:0,30,869	0/0:24,0:23:66.23:0,66,2607	0/0:39,0:39:99:0,111,5805	0/1:8,3:11:99:264,0,108	0/1:8,5:13:72.63:439,0,73	0/1:9,2:11:76.59:77,0,153	0/0:25,0:25:72.25:0,72,2822	0/0:25,0:25:72.25:0,72,3046	0/0:10,0:11:24.68:0,25,801	0/0:28,0:28:30.69:0,31,3958
chr10	51779844	.	TAA	T	5381.93	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=12.476;DP=633;FS=16.965;HRun=2;HaplotypeScore=87.8487;InbreedingCoeff=0.9996;MQ=80.77;MQ0=0;MQRankSum=-2.134;QD=42.38;ReadPosRankSum=2.673;VQSLOD=3.6510;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:75.26:0,75,1524	0/0:14,0:14:42.14:0,42,854	0/0:15,0:15:45.14:0,45,856	0/0:19,0:19:55.40:0,55,1019	0/0:29,0:29:87.30:0,87,1768	0/0:28,0:28:84.29:0,84,1697	0/0:10,0:10:30.10:0,30,610	0/0:28,0:28:84.28:0,84,1674	0/0:9,0:9:27.09:0,27,538	0/0:32,0:32:96.32:0,96,1886	0/0:31,0:31:93.29:0,93,1800	1/1:0,22:22:57.19:930,57,0	1/1:0,32:32:87.30:1419,87,0	0/0:25,0:25:75.24:0,75,1475	0/0:28,0:28:84.27:0,84,1662	0/0:23,0:23:69.24:0,69,1401	0/0:22,0:22:66.23:0,66,1341	0/0:13,0:13:39.10:0,39,731	0/0:17,0:17:51.17:0,51,1005	0/0:34,0:34:99:0,102,2063	0/0:19,0:19:57.20:0,57,1148	1/1:0,27:27:63.22:1028,63,0	1/1:0,21:21:53.88:879,54,0	1/1:0,25:25:69.24:1126,69,0	0/0:26,0:26:78.27:0,78,1585	0/0:22,0:22:66.23:0,66,1321	0/0:23,0:23:69.22:0,69,1345	0/0:14,0:14:42.14:0,42,852
chr10	51787119	.	C	CT	5430.14	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=1.612;DP=555;FS=6.219;HRun=8;HaplotypeScore=80.8196;InbreedingCoeff=0.9956;MQ=68.66;MQ0=0;MQRankSum=-7.297;QD=28.73;ReadPosRankSum=0.571;VQSLOD=4.9428;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,19:20:54.12:608,54,0	1/1:0,6:6:18.05:208,18,0	0/0:18,0:16:31.21:0,31,269	0/0:18,0:13:19.77:0,20,206	0/0:38,0:38:99:0,105,961	0/0:13,0:13:30.01:0,30,274	0/0:12,0:12:26.99:0,27,242	0/0:27,0:27:63.01:0,63,573	0/0:12,0:12:30.01:0,30,274	0/0:27,0:27:69.02:0,69,629	0/0:29,0:29:78.04:0,78,714	1/1:5,14:19:51.15:585,51,0	1/1:5,18:23:63.15:710,63,0	0/0:10,0:10:24:0,24,219	1/1:6,9:15:38.99:397,39,0	1/1:3,11:14:39.11:442,39,0	1/1:5,27:32:57.07:836,57,0	1/1:6,10:15:33.06:365,33,0	0/0:16,0:16:29.99:0,30,275	0/0:24,0:24:59.05:0,59,523	0/0:9,0:9:21:0,21,192	1/1:3,13:16:19.82:428,20,0	1/1:3,16:19:51.12:575,51,0	1/1:1,8:9:24.07:277,24,0	0/0:30,0:30:74.98:0,75,672	0/0:27,0:27:75.03:0,75,686	0/0:22,0:22:57.01:0,57,517	0/0:33,0:33:84.03:0,84,764
chr10	51787137	.	CT	C	1143.75	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.057;DP=594;FS=12.309;HRun=9;HaplotypeScore=93.0037;InbreedingCoeff=0.9831;MQ=63.02;MQ0=5;MQRankSum=-9.415;QD=16.82;ReadPosRankSum=1.272;VQSLOD=2.7112;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,17:20:44.97:396,45,0	0/0:3,0:6:14.41:0,14,81	0/0:32,1:16:30.91:0,31,280	0/0:43,0:12:21.52:0,22,200	0/0:38,0:38:99:0,99,1125	0/0:17,0:17:42.06:0,42,452	0/0:9,0:9:21.04:0,21,230	0/0:21,0:20:54.11:0,54,601	0/0:11,1:12:30.08:0,30,336	0/0:28,1:29:53.90:0,54,864	0/0:27,1:28:50.78:0,51,819	0/0:16,0:16:45.13:0,45,519	0/0:23,0:23:60.18:0,60,692	0/0:13,0:13:36.08:0,36,395	0/0:6,0:13:34.79:0,35,180	0/0:1,0:11:28.47:0,28,146	1/1:10,25:35:71.84:634,72,0	1/1:6,6:11:29.38:256,29,0	0/0:23,0:23:54.14:0,54,607	0/0:24,0:24:66.11:0,66,732	0/0:8,0:8:21.06:0,21,242	0/0:18,0:18:51.11:0,51,574	0/0:19,0:19:51.13:0,51,570	0/0:8,0:8:18.01:0,18,193	0/0:28,0:28:75.21:0,75,856	0/0:31,2:33:25.03:0,25,765	0/0:20,1:21:19.82:0,20,470	0/0:30,0:30:78.23:0,78,899
chr10	51787153	.	C	CT	1213.50	PASS	AB=0.875;AC=6;AF=0.107;AN=56;BaseQRankSum=6.994;DP=631;FS=13.634;HRun=10;HaplotypeScore=96.5515;InbreedingCoeff=0.6202;MQ=54.91;MQ0=32;MQRankSum=-9.549;QD=9.19;ReadPosRankSum=0.563;VQSLOD=0.9935;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:11,13:22:13.49:312,13,0	0/0:5,0:4:8.97:0,9,72	0/1:44,0:12:6.59:7,0,35	0/0:45,0:9:10.86:0,11,67	0/0:34,0:33:77.83:0,78,631	0/0:19,0:19:50.66:0,51,404	0/0:10,0:9:23.77:0,24,185	0/0:23,0:21:43.06:0,43,336	0/0:12,0:10:23.96:0,24,195	0/0:33,0:33:55.74:0,56,630	0/0:22,0:22:59.92:0,60,492	0/0:15,0:15:32.95:0,33,271	0/0:21,0:21:44.49:0,44,353	0/0:15,0:14:35.92:0,36,291	0/0:19,0:16:38.87:0,39,307	0/0:11,0:11:20.77:0,21,160	1/1:11,25:39:77.91:773,78,0	0/1:15,8:18:6.57:252,0,7	0/0:21,1:21:21.35:0,21,358	0/0:27,0:27:57.46:0,57,428	0/0:12,0:12:14.95:0,15,123	0/0:20,0:20:44.94:0,45,369	0/0:12,0:12:17.76:0,18,148	0/0:7,0:6:11.96:0,12,95	0/0:30,0:30:40.87:0,41,512	0/0:31,1:32:7.12:0,7,438	0/0:20,0:20:42.80:0,43,364	0/0:29,0:27:65.90:0,66,541
chr10	51787169	.	CTT	C	1037.69	PASS	AB=0.785;AC=15;AF=0.278;AN=54;BaseQRankSum=5.485;DP=583;FS=1.977;HRun=13;HaplotypeScore=86.4527;InbreedingCoeff=0.6590;MQ=46.24;MQ0=38;MQRankSum=-5.864;QD=6.25;ReadPosRankSum=3.841;VQSLOD=0.2137;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:12,9:19:17.65:106,0,18	0/0:4,0:4:0:0,0,0	./.	0/0:32,0:3:0:0,0,0	0/0:25,1:25:15.02:0,15,486	0/0:16,0:18:41.63:0,42,573	0/0:11,0:10:15.51:0,16,197	0/0:23,0:21:33.02:0,33,406	0/0:13,0:10:15.03:0,15,198	0/0:32,1:33:27.39:0,27,641	0/0:24,0:22:38.21:0,38,436	1/1:3,9:14:22.29:190,22,0	1/1:6,12:18:26.93:262,27,0	0/0:15,0:15:23.25:0,23,276	0/0:12,0:14:24.04:0,24,265	0/0:11,0:11:16.28:0,16,191	1/1:26,15:41:22.83:195,23,0	0/1:17,6:17:44.83:107,0,45	0/0:25,0:19:39.10:0,39,511	0/0:27,0:28:60.05:0,60,750	0/1:9,1:9:8.02:8,0,220	1/1:9,9:17:17.96:174,18,0	1/1:3,4:7:12:116,12,0	1/1:6,3:5:6:58,6,0	0/0:24,0:25:44.61:0,45,583	0/0:30,0:29:56.18:0,56,674	0/0:21,0:22:47.39:0,47,542	0/0:23,0:22:44.55:0,45,533
chr10	51787316	.	A	AAAGGAAGG	1626.17	PASS	AB=1.000;AC=14;AF=0.269;AN=52;BaseQRankSum=-0.796;DP=455;FS=9.902;HRun=0;HaplotypeScore=109.2553;InbreedingCoeff=0.6809;MQ=62.84;MQ0=7;MQRankSum=-5.046;QD=11.21;ReadPosRankSum=-2.086;VQSLOD=1.1480;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:16:2.94:0,3,18	0/0:3,0:3:3:0,3,25	./.	./.	0/0:14,0:14:24.04:0,24,415	0/0:15,0:15:12.03:0,12,248	0/0:10,0:10:12.04:0,12,295	0/1:24,0:23:0:0,0,0	0/0:18,0:18:27.09:0,27,653	0/0:14,0:14:18.06:0,18,386	0/0:24,0:24:42.04:0,42,905	1/1:13,7:23:13.88:491,14,0	1/1:10,7:19:12.04:482,12,0	0/0:13,0:13:15.02:0,15,314	0/0:20,0:20:27.09:0,27,655	0/0:15,0:15:24.07:0,24,537	0/1:28,0:27:10.67:118,0,11	1/1:13,0:11:3.01:95,3,0	0/0:15,0:13:12.03:0,12,229	0/0:16,0:17:24.08:0,24,572	0/0:19,0:19:20.97:0,21,405	1/1:10,5:18:14.94:402,15,0	1/1:7,0:6:5.93:93,6,0	1/1:8,1:13:3.01:104,3,0	0/0:16,0:16:30.09:0,30,644	0/0:24,0:24:24.07:0,24,524	0/0:20,0:20:38.92:0,39,596	0/0:4,0:4:9:0,9,123
chr10	51790316	.	CT	C	698.31	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=2.104;DP=601;FS=4.532;HRun=8;HaplotypeScore=79.0594;InbreedingCoeff=0.9949;MQ=75.72;MQ0=0;MQRankSum=-1.053;QD=19.40;ReadPosRankSum=1.467;VQSLOD=3.6032;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:72.08:0,72,822	1/1:0,8:8:24.04:232,24,0	0/0:19,0:19:38.91:0,39,425	0/0:9,0:9:22.31:0,22,253	0/0:40,0:40:99:0,114,1365	0/0:21,0:21:60.18:0,60,725	0/0:15,0:15:39.08:0,39,445	0/0:34,0:34:93.23:0,93,1063	0/0:20,0:20:57.16:0,57,677	0/0:28,0:28:78.23:0,78,932	0/0:24,0:24:57.17:0,57,688	0/0:13,0:13:29.32:0,29,182	0/0:28,0:28:70.26:0,70,423	0/0:17,0:17:42.11:0,42,487	1/1:0,17:17:42.07:406,42,0	1/1:2,9:11:21.03:203,21,0	0/0:21,0:21:60.16:0,60,709	0/0:17,0:17:51.16:0,51,614	0/0:15,0:15:39.12:0,39,471	0/0:41,0:41:99:0,114,1364	0/0:8,0:8:21.05:0,21,243	0/0:25,0:25:64.50:0,65,395	0/0:30,0:30:78.82:0,79,467	0/0:13,0:13:35.09:0,35,207	0/0:25,0:25:66.20:0,66,797	0/0:30,0:30:67.53:0,68,962	0/0:32,0:32:90.25:0,90,1060	0/0:16,0:16:47.33:0,47,528
chr10	51790324	.	T	TA	3691.94	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=7.336;DP=619;FS=17.414;HRun=3;HaplotypeScore=71.6126;InbreedingCoeff=0.9715;MQ=76.59;MQ0=0;MQRankSum=-2.517;QD=33.26;ReadPosRankSum=2.564;VQSLOD=2.1720;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:69.12:0,69,791	0/0:11,0:11:32.22:0,32,206	0/0:19,0:19:35.03:0,35,415	0/0:9,0:10:5.33:0,5,228	0/0:41,0:41:99:0,117,1359	0/0:23,0:23:69.16:0,69,781	0/0:16,0:16:45.08:0,45,482	0/0:39,0:39:99:0,108,1180	0/0:19,0:19:56.90:0,57,645	0/0:27,0:27:75.22:0,75,889	0/0:20,0:20:54.16:0,54,644	1/1:1,12:13:27.09:365,27,0	1/1:2,27:29:69.23:934,69,0	0/0:18,0:18:42.10:0,42,479	0/0:18,0:18:43.63:0,44,247	0/0:13,0:13:32.32:0,32,217	0/0:22,0:22:66.05:0,66,729	0/0:20,0:20:53.95:0,54,597	0/0:14,0:14:39.11:0,39,457	0/0:43,0:43:99:0,129,1463	0/0:9,0:9:21.04:0,21,236	1/1:3,22:25:63.12:811,63,0	1/1:0,30:30:81.27:1095,81,0	1/1:0,14:14:36.12:487,36,0	0/0:24,0:24:72.20:0,72,842	0/0:32,0:32:93.23:0,93,1064	0/0:31,0:31:87.23:0,87,1006	0/0:14,0:14:38.86:0,39,464
chr10	51791130	.	A	AT	3700.01	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=7.122;DP=548;FS=0.000;HRun=7;HaplotypeScore=71.4736;InbreedingCoeff=0.9929;MQ=81.10;MQ0=0;MQRankSum=-2.236;QD=21.39;ReadPosRankSum=1.655;VQSLOD=3.2608;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,11:14:39.09:456,39,0	1/1:1,9:10:27.08:326,27,0	0/0:17,0:17:39.01:0,39,365	0/0:11,0:11:29.88:0,30,274	0/0:30,0:30:75.10:0,75,719	0/0:29,0:29:84.13:0,84,811	0/0:13,0:13:33.05:0,33,319	0/0:35,0:35:99:0,99,947	0/0:28,0:28:75.10:0,75,719	0/0:25,0:25:63.08:0,63,602	0/0:16,0:16:42.07:0,42,406	1/1:5,0:25:51.72:263,52,0	1/1:1,0:12:28.74:146,29,0	0/0:22,0:22:63.10:0,63,608	1/1:0,17:17:48.15:580,48,0	1/1:2,13:15:10.14:406,10,0	1/1:2,14:16:42.13:507,42,0	1/1:0,12:12:33.10:397,33,0	0/0:20,0:20:51.07:0,51,487	0/0:27,0:27:63.09:0,63,608	0/0:17,0:17:42.06:0,42,406	1/1:2,0:16:43.18:224,43,0	1/1:4,0:21:43.09:219,43,0	1/1:0,0:15:34.50:175,35,0	0/0:12,0:12:33.05:0,33,319	0/0:29,0:29:75.12:0,75,724	0/0:29,0:29:69.08:0,69,655	0/0:15,0:15:42.06:0,42,406
chr10	51792017	.	G	GTTTTCTAC	4286.58	PASS	AC=14;AF=0.259;AN=54;BaseQRankSum=-0.075;DP=436;FS=36.664;HRun=0;HaplotypeScore=109.7798;InbreedingCoeff=0.9168;MQ=70.19;MQ0=0;MQRankSum=-8.920;QD=68.04;ReadPosRankSum=-1.596;VQSLOD=2.2634;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/0:7,0:7:15.05:0,15,403	0/0:16,0:15:2.27:0,2,491	0/0:14,0:15:22.21:0,22,393	0/0:22,0:22:57.19:0,57,1375	0/0:22,0:22:66.23:0,66,1779	0/0:24,0:24:60.20:0,60,1513	0/0:30,0:30:81.26:0,81,1987	0/0:24,0:24:60.19:0,60,1458	0/0:24,0:24:69.24:0,69,1894	0/0:16,0:16:39.13:0,39,1033	1/1:2,5:8:12.04:489,12,0	1/1:5,5:10:18.53:644,19,0	0/0:14,0:14:42.14:0,42,1155	0/0:16,0:16:45.15:0,45,1143	0/0:19,0:19:48.13:0,48,1258	1/1:1,5:9:15.05:618,15,0	1/1:2,0:2:6.02:189,6,0	0/0:19,0:19:54.19:0,54,1483	0/0:13,0:13:39.13:0,39,1072	0/0:13,0:13:30.10:0,30,825	1/1:7,8:16:30.10:1171,30,0	1/1:4,6:11:21.07:860,21,0	1/1:2,5:7:9.03:316,9,0	0/0:23,0:23:60.21:0,60,1618	0/0:17,0:17:48.16:0,48,1239	0/0:23,0:23:63.22:0,63,1649	0/0:10,0:10:15.05:0,15,413
chr10	51792138	.	CGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	C	1208.75	PASS	AC=10;AF=0.200;AN=50;BaseQRankSum=4.727;DP=431;FS=10.054;HRun=0;HaplotypeScore=308.3018;InbreedingCoeff=0.7899;MQ=69.47;MQ0=20;MQRankSum=-3.689;QD=22.81;ReadPosRankSum=-1.005;VQSLOD=0.9120;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:8,0:8:11.97:0,12,1023	0/0:38,0:22:60.16:0,60,3296	0/0:30,0:17:32.48:0,32,2382	0/0:16,0:15:15.03:0,15,1929	0/0:19,0:19:48.16:0,48,5784	0/0:21,0:21:57.20:0,57,4533	0/0:32,0:30:75.22:0,75,5514	0/0:14,0:14:39.13:0,39,4016	0/0:15,0:14:35.85:0,36,3372	0/0:10,0:10:9.03:0,9,995	1/1:5,2:9:3.01:170,3,0	1/1:8,6:15:3.01:261,3,0	0/0:15,0:15:39.13:0,39,3999	0/0:28,0:28:41.31:0,41,3298	0/0:16,0:14:30.57:0,31,2941	1/1:10,1:12:9.03:657,9,0	1/1:7,0:8:6.02:230,6,0	0/0:16,0:16:39.12:0,39,2808	0/0:11,0:10:18.06:0,18,1365	0/0:13,0:13:24.12:0,24,2879	1/1:7,0:8:3:25,3,0	./.	./.	0/0:23,0:22:51.16:0,51,6228	0/0:11,0:11:24.08:0,24,2384	0/0:16,0:16:39.12:0,39,2386	0/0:11,0:12:33.11:0,33,3619
chr10	51792524	.	CT	C	9057.65	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=15.407;DP=665;FS=3.489;HRun=1;HaplotypeScore=83.2858;InbreedingCoeff=0.9993;MQ=74.15;MQ0=0;MQRankSum=-0.229;QD=39.04;ReadPosRankSum=3.915;VQSLOD=5.5381;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,51:51:99:2054,147,0	0/0:8,0:8:24.08:0,24,384	0/0:18,0:19:49.57:0,50,790	0/0:18,0:17:38.32:0,38,733	0/0:18,0:18:54.18:0,54,861	0/0:30,0:30:90.31:0,90,1436	0/0:19,0:19:57.15:0,57,881	0/0:28,0:28:81.28:0,81,1294	0/0:23,0:23:69.24:0,69,1100	0/0:24,0:23:72.25:0,72,1149	0/0:18,0:18:51.17:0,51,815	1/1:0,32:32:87.26:1195,87,0	1/1:1,30:31:90.30:1243,90,0	0/0:32,0:32:93.32:0,93,1484	0/0:27,0:27:72.25:0,72,1148	0/0:23,0:22:69.24:0,69,1103	1/1:0,28:28:78.26:1090,78,0	1/1:0,17:17:51.17:713,51,0	0/0:16,0:16:48.16:0,48,755	0/0:12,0:12:36.12:0,36,575	0/0:28,0:28:81.26:0,81,1267	1/1:0,23:23:63.21:880,63,0	1/1:0,17:17:48.16:666,48,0	1/1:0,33:33:87.29:1216,87,0	0/0:36,0:36:99:0,102,1627	0/0:12,0:12:36.12:0,36,576	0/0:34,0:34:99:0,102,1624	0/0:8,0:8:24.08:0,24,384
chr10	51792691	.	ATGTGTGTGTGTGTG	A	2638.40	PASS	AB=0.791;AC=12;AF=0.214;AN=56;BaseQRankSum=8.533;DP=651;FS=11.760;HRun=0;HaplotypeScore=227.3691;InbreedingCoeff=0.6519;MQ=55.32;MQ0=8;MQRankSum=-8.756;QD=18.07;ReadPosRankSum=-1.324;VQSLOD=1.2775;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:23:9.02:0,9,117	0/0:9,0:9:4.67:0,5,210	0/0:34,0:15:6:0,6,55	0/0:33,0:13:15.05:0,15,682	0/0:27,0:26:33.88:0,34,1949	0/0:26,0:25:29.81:0,30,1164	0/0:29,0:29:51.60:0,52,1823	0/0:26,0:24:51.18:0,51,2426	0/0:30,0:29:54.17:0,54,2667	0/0:25,0:25:39.10:0,39,1578	0/0:19,0:19:42.14:0,42,2251	1/1:12,11:28:12.39:312,12,0	1/1:10,5:29:48.16:1327,48,0	0/0:16,0:16:27.09:0,27,1466	0/0:37,0:37:29.61:0,30,1086	0/0:25,0:25:36.59:0,37,1335	1/1:17,0:16:3.01:48,3,0	0/1:13,0:18:69.47:69,0,88	0/0:18,0:18:30.09:0,30,1287	0/0:19,0:19:15.95:0,16,1282	0/0:36,0:35:54.09:0,54,1874	1/1:5,13:25:17:574,17,0	1/1:3,3:13:5.96:137,6,0	0/1:12,1:15:99:335,0,177	0/0:23,0:23:42.14:0,42,2216	0/0:15,0:15:33.11:0,33,1282	0/0:30,0:30:59.41:0,59,2892	0/0:5,0:5:12.04:0,12,572
chr10	51792714	.	TGTGTGTGTGTGTGA	T	2148.36	PASS	AB=0.949;AC=9;AF=0.167;AN=54;BaseQRankSum=8.405;DP=615;FS=4.608;HRun=0;HaplotypeScore=212.0257;InbreedingCoeff=0.0992;MQ=47.99;MQ0=17;MQRankSum=-8.210;QD=14.04;ReadPosRankSum=0.572;VQSLOD=2.4729;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:5.98:0,6,46	0/1:10,0:10:0.15:0,0,255	./.	0/0:18,0:5:15.05:0,15,570	0/0:25,0:22:45.92:0,46,2079	0/0:26,0:25:44.78:0,45,1185	0/0:34,0:33:62.64:0,63,1583	0/0:32,0:29:70.88:0,71,2270	0/0:30,0:28:66.21:0,66,2709	0/0:24,0:24:51.16:0,51,1567	0/0:22,0:21:45.12:0,45,2071	0/1:22,0:22:33.07:219,0,33	0/1:23,0:23:0.49:980,0,0	0/0:14,0:14:33.10:0,33,1387	0/0:41,0:41:29.61:0,30,869	0/0:21,0:21:22.64:0,23,1042	0/1:7,9:14:26.01:74,0,26	1/1:17,0:16:2.43:190,2,0	0/0:16,0:15:36.09:0,36,1440	0/0:14,0:14:32.72:0,33,1226	0/0:33,0:31:62.69:0,63,1983	0/1:30,0:28:99:449,0,122	0/1:18,0:18:62.32:84,0,62	0/1:17,0:13:99:282,0,178	0/0:27,0:27:17.43:0,17,1981	0/0:17,0:17:13.94:0,14,1307	0/0:27,0:27:71.55:0,72,2868	0/0:6,0:5:15.05:0,15,642
chr10	51792724	.	TGTGAGA	T	1171.42	PASS	AB=0.967;AC=19;AF=0.352;AN=54;BaseQRankSum=1.980;DP=568;FS=20.142;HRun=0;HaplotypeScore=154.6381;InbreedingCoeff=-0.0992;MQ=47.70;MQ0=17;MQRankSum=-0.804;QD=3.24;ReadPosRankSum=-0.681;VQSLOD=1.0744;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:1.82:0,2,5	1/1:11,0:11:18.89:211,19,0	./.	0/0:8,0:2:6.02:0,6,82	0/0:25,0:22:33.97:0,34,486	0/1:26,0:25:76.39:76,0,385	0/1:37,0:36:99:264,0,345	0/0:31,0:28:50.84:0,51,519	0/1:26,0:24:7.97:8,0,712	0/1:19,0:19:43.08:43,0,302	0/0:20,0:18:12.05:0,12,493	0/1:24,0:24:12.77:13,0,183	0/1:25,0:25:99:104,0,183	0/1:15,0:15:2.37:2,0,386	0/1:9,27:38:49.44:76,0,49	1/1:18,0:18:28.99:378,29,0	0/0:16,0:14:3.44:0,3,33	1/1:14,0:13:0.93:46,1,0	0/0:16,0:15:18.35:0,18,621	0/0:13,0:13:28.08:0,28,415	0/0:23,0:21:47.79:0,48,886	0/1:33,0:31:30.88:31,0,390	0/1:17,0:17:5.70:6,0,133	0/1:17,0:13:33.02:33,0,62	0/1:29,0:29:7.29:7,0,379	0/1:12,0:12:32.82:33,0,267	0/0:24,0:24:31.91:0,32,881	0/0:5,0:4:11.99:0,12,224
chr10	51792726	.	T	TGAGA	1508.82	PASS	AB=0.934;AC=16;AF=0.296;AN=54;BaseQRankSum=2.234;DP=571;FS=4.227;HRun=0;HaplotypeScore=144.5627;InbreedingCoeff=0.4464;MQ=47.72;MQ0=17;MQRankSum=-1.349;QD=6.04;ReadPosRankSum=-1.734;VQSLOD=2.4294;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:23:0.89:2,1,0	0/0:8,0:9:12.90:0,13,118	./.	0/0:4,0:1:3.01:0,3,45	0/0:23,0:22:12.75:0,13,177	0/0:26,0:25:9.48:0,9,101	0/1:36,0:35:33.58:34,0,105	1/1:31,0:28:18:199,18,0	0/0:26,0:24:21.07:0,21,307	0/0:20,0:20:21.04:0,21,275	0/0:23,0:21:15:0,15,183	1/1:26,0:26:15.20:205,15,0	1/1:27,0:27:8.53:291,9,0	0/0:14,0:14:5.39:0,5,56	0/0:38,0:38:6.96:0,7,75	0/0:18,0:18:14.20:0,14,139	0/0:16,0:14:8.99:0,9,94	0/0:14,0:13:18.05:0,18,213	0/1:19,0:18:27.70:149,0,28	0/1:9,4:14:26.85:27,0,123	0/1:23,0:21:22.55:217,0,23	1/1:33,0:31:26.73:413,27,0	1/1:17,0:17:7.73:142,8,0	0/0:17,0:13:2.88:0,3,35	0/0:28,0:29:22.15:0,22,242	0/0:12,0:12:15.04:0,15,187	0/0:22,0:22:23.79:0,24,348	0/0:5,0:4:6.02:0,6,91
chr10	51792739	.	G	GAGAGAA	2640.75	PASS	AB=0.845;AC=10;AF=0.179;AN=56;BaseQRankSum=9.911;DP=599;FS=2.704;HRun=0;HaplotypeScore=158.1479;InbreedingCoeff=0.7001;MQ=47.57;MQ0=20;MQRankSum=-5.794;QD=17.49;ReadPosRankSum=-3.510;VQSLOD=2.4278;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:26:5.89:0,6,39	0/0:11,0:11:21.03:0,21,266	0/0:11,0:6:18.01:0,18,171	0/0:6,0:4:11.60:0,12,130	0/0:24,0:21:42.84:0,43,519	0/0:26,0:25:36.80:0,37,443	0/0:30,0:29:42.50:0,43,502	0/0:28,0:26:35.13:0,35,284	0/0:24,0:22:53.98:0,54,733	0/0:21,0:21:56.52:0,57,690	0/0:24,0:22:42.02:0,42,535	1/1:25,0:25:49.62:632,50,0	1/1:29,0:29:35.52:816,36,0	0/0:13,0:13:27:0,27,293	0/0:44,0:44:39.42:0,39,388	0/0:20,0:19:33.11:0,33,384	0/0:16,0:13:15.48:0,15,213	0/0:17,0:16:32.87:0,33,445	0/0:17,0:17:34.60:0,35,311	0/0:18,0:18:5.58:0,6,302	0/1:22,0:20:31.24:31,0,316	1/1:34,0:32:65.90:883,66,0	1/1:21,0:21:41.39:411,41,0	0/1:11,8:16:34.85:35,0,73	0/0:27,0:27:48.05:0,48,627	0/0:14,0:14:34.55:0,35,450	0/0:21,0:21:47.99:0,48,722	0/0:8,0:5:14.98:0,15,205
chr10	51793594	.	A	AT	5139.91	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=2.505;DP=656;FS=8.049;HRun=9;HaplotypeScore=80.8250;InbreedingCoeff=0.9789;MQ=83.45;MQ0=0;MQRankSum=-1.010;QD=18.29;ReadPosRankSum=5.346;VQSLOD=4.8384;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,38:46:96.26:1062,96,0	1/1:0,9:9:21.06:231,21,0	0/0:21,0:22:25.26:0,25,213	0/0:21,0:21:31.54:0,32,308	0/0:32,0:32:80.91:0,81,691	0/0:17,1:18:20.80:0,21,407	0/0:17,0:17:43.98:0,44,362	0/0:29,0:29:54.07:0,54,566	0/0:25,0:25:71.94:0,72,615	0/0:22,0:22:53.95:0,54,464	0/0:24,0:24:51.02:0,51,523	1/1:25,0:25:56.82:281,57,0	1/1:21,0:21:39.83:199,40,0	0/0:29,0:29:83.89:0,84,708	1/1:8,24:32:14.08:612,14,0	1/1:3,16:19:16.08:405,16,0	1/1:4,29:33:72.19:796,72,0	1/1:2,26:29:69.19:763,69,0	0/0:20,0:20:56.98:0,57,492	0/0:22,0:22:59.97:0,60,517	0/0:17,0:17:44.93:0,45,377	1/1:18,0:18:42.88:221,43,0	1/1:25,0:25:62.80:327,63,0	1/1:24,0:24:48.83:242,49,0	0/0:18,0:18:50.98:0,51,441	0/0:17,0:17:44.87:0,45,374	0/0:36,0:35:95.94:0,96,826	0/0:6,0:6:5.99:0,6,52
chr10	51793603	.	T	TTTA	5761.38	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-8.065;DP=651;FS=3.017;HRun=0;HaplotypeScore=102.6631;InbreedingCoeff=0.9947;MQ=82.58;MQ0=0;MQRankSum=-1.004;QD=50.10;ReadPosRankSum=2.480;VQSLOD=7.3509;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:82.57:0,83,297	0/0:10,0:10:20.20:0,20,84	0/0:21,0:21:29.65:0,30,512	0/0:20,0:20:46.26:0,46,666	0/0:29,0:29:87.27:0,87,1344	0/0:20,0:20:59.54:0,60,869	0/0:16,0:17:51.09:0,51,730	0/0:32,0:32:87.68:0,88,1194	0/0:24,0:24:72.23:0,72,1143	0/0:24,0:24:63.13:0,63,928	0/0:24,0:24:71.43:0,71,1060	1/1:1,25:27:60.21:1366,60,0	1/1:0,19:21:42.14:947,42,0	0/0:29,0:29:87.20:0,87,1285	0/0:30,0:30:64.92:0,65,344	0/0:17,0:17:35.45:0,35,161	0/0:34,0:34:57.68:0,58,276	0/0:28,0:28:27.78:0,28,182	0/0:27,0:27:72.17:0,72,1034	0/0:22,0:22:63.18:0,63,975	0/0:15,0:15:45.15:0,45,711	1/1:1,15:21:45.11:928,45,0	1/1:0,24:25:66.23:1393,66,0	1/1:1,18:21:51.17:1127,51,0	0/0:18,0:18:54.17:0,54,834	0/0:18,0:18:54.13:0,54,764	0/0:33,0:32:99:0,99,1577	0/0:5,0:5:15:0,15,170
chr10	51793982	.	AGCGC	A	5027.32	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=8.942;DP=614;FS=1.933;HRun=0;HaplotypeScore=109.6661;InbreedingCoeff=0.9973;MQ=82.65;MQ0=0;MQRankSum=-3.995;QD=49.29;ReadPosRankSum=5.092;VQSLOD=5.5750;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,105,2826	0/0:11,0:11:30:0,30,742	0/0:15,0:15:22.55:0,23,871	0/0:19,0:19:48.13:0,48,1058	0/0:14,0:14:36.12:0,36,948	0/0:27,0:26:81.20:0,81,2078	0/0:37,0:37:99:0,111,2898	0/0:25,0:25:72.25:0,72,1860	0/0:11,0:11:33.11:0,33,916	0/0:25,0:25:75.20:0,75,1913	0/0:15,0:15:45.14:0,45,1180	1/1:0,29:29:81.28:1616,81,0	1/1:0,15:15:36.12:717,36,0	0/0:22,0:22:66.23:0,66,1842	0/0:31,0:31:90.25:0,90,2391	0/0:9,0:9:27.04:0,27,576	0/0:33,0:33:96.28:0,96,2561	0/0:26,0:26:75.21:0,75,2028	0/0:22,0:22:66.22:0,66,1720	0/0:11,0:11:30.10:0,30,788	0/0:59,0:59:99:0,175,4735	1/1:0,18:17:45.15:898,45,0	1/1:2,8:10:21.07:419,21,0	1/1:0,30:30:69.06:1377,69,0	0/0:15,0:15:45.15:0,45,1237	0/0:20,0:20:60.21:0,60,1531	0/0:16,0:16:48.11:0,48,1218	0/0:9,0:9:24.08:0,24,644
chr10	51795027	.	AACAC	A	5202.06	PASS	AB=0.659;AC=20;AF=0.357;AN=56;BaseQRankSum=14.567;DP=731;FS=2.161;HRun=0;HaplotypeScore=130.8668;InbreedingCoeff=0.8383;MQ=61.89;MQ0=11;MQRankSum=-5.729;QD=21.68;ReadPosRankSum=5.326;VQSLOD=4.6878;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,0:17:21.02:195,21,0	1/1:2,0:8:15.02:139,15,0	0/0:52,0:26:35.31:0,35,671	0/0:41,0:27:30.05:0,30,545	0/0:31,0:30:87.28:0,87,2020	0/0:25,0:25:66.23:0,66,1579	0/0:25,0:25:20.42:0,20,925	0/0:31,0:35:86.53:0,87,1560	0/0:22,0:22:57.18:0,57,1316	0/0:28,0:30:77.73:0,78,1692	0/0:24,0:24:54.17:0,54,1165	1/1:8,20:28:51.17:861,51,0	1/1:3,23:26:51.17:861,51,0	0/0:24,0:23:54.18:0,54,1277	1/1:7,0:35:61.71:583,62,0	1/1:3,0:18:36.04:335,36,0	0/1:8,0:26:23.76:245,0,24	0/1:5,0:8:22.29:22,0,30	0/0:28,0:28:65.95:0,66,1404	0/0:31,0:32:89.84:0,90,1971	0/0:18,0:18:45.15:0,45,1082	1/1:8,14:23:23.38:545,23,0	1/1:6,20:26:47.90:809,48,0	1/1:5,18:23:22.15:607,22,0	0/0:17,0:18:44.47:0,44,888	0/0:37,0:36:72.02:0,72,1667	0/0:37,0:38:99:0,111,2531	0/0:9,0:9:15.05:0,15,369
chr10	51796776	.	CGTGTGTGT	C	1046.91	PASS	AB=0.957;AC=7;AF=0.125;AN=56;BaseQRankSum=4.937;DP=595;FS=1.957;HRun=0;HaplotypeScore=150.4715;InbreedingCoeff=0.7119;MQ=61.75;MQ0=6;MQRankSum=-5.966;QD=16.62;ReadPosRankSum=2.122;VQSLOD=3.0930;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:35:6.02:0,6,215	1/1:4,2:6:9.03:209,9,0	0/0:32,0:19:12.04:0,12,349	0/0:26,0:14:12.04:0,12,352	0/0:24,0:25:51.18:0,51,1841	0/0:18,0:19:36.12:0,36,1314	0/0:24,0:24:51.18:0,51,1896	0/0:21,0:23:47.36:0,47,1447	0/0:14,0:15:36.59:0,37,1337	0/0:21,0:23:45.15:0,45,1621	0/0:19,0:19:21.07:0,21,744	0/0:15,0:19:12.04:0,12,378	0/0:33,0:33:30.10:0,30,793	0/1:21,1:22:20.87:21,0,1707	1/1:7,11:18:14.88:595,15,0	1/1:7,9:17:20.88:361,21,0	0/0:15,0:15:27.09:0,27,737	0/0:22,0:21:24.08:0,24,552	0/0:18,0:18:24.08:0,24,857	0/0:19,0:22:42.13:0,42,1539	0/0:27,0:28:42.14:0,42,1492	0/0:15,0:15:0.47:0,0,1	0/0:18,0:17:12.04:0,12,343	0/0:18,0:23:12.63:0,13,242	0/0:20,0:22:36.12:0,36,1264	0/0:21,0:22:39.12:0,39,1147	0/0:15,0:20:54.18:0,54,1740	0/0:6,0:9:12.04:0,12,363
chr10	51797017	.	G	GT	2655.28	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=11.943;DP=734;FS=12.268;HRun=3;HaplotypeScore=76.5061;InbreedingCoeff=0.9997;MQ=92.55;MQ0=0;MQRankSum=-2.550;QD=29.83;ReadPosRankSum=2.121;VQSLOD=2.5214;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,45:48:99:1508,108,0	0/0:11,0:11:33.10:0,33,389	0/0:33,0:33:74.39:0,74,870	0/0:28,0:28:33.24:0,33,676	0/0:22,0:22:63:0,63,709	0/0:21,0:21:63.18:0,63,744	0/0:33,0:33:84.24:0,84,993	0/0:36,0:36:93.20:0,93,1051	0/0:35,0:35:99:0,99,1170	0/0:22,0:22:66.14:0,66,766	0/0:19,0:19:57.17:0,57,678	0/0:35,0:35:96.27:0,96,1130	0/0:22,0:22:66.18:0,66,776	0/0:31,0:31:93.25:0,93,1084	0/0:31,0:31:90.22:0,90,1043	0/0:16,0:16:45.14:0,45,539	1/1:1,20:23:48.16:665,48,0	1/1:0,18:18:45.15:625,45,0	0/0:22,0:22:60.17:0,60,708	0/0:24,0:24:63.18:0,63,741	0/0:39,0:38:99:0,108,1250	0/0:23,0:23:69.21:0,69,826	0/0:15,0:15:39.12:0,39,467	0/0:32,0:32:81.17:0,81,928	0/0:24,0:24:66.20:0,66,787	0/0:26,0:26:63.15:0,63,799	0/0:31,0:30:90.13:0,90,1010	0/0:14,0:14:36.11:0,36,432
chr10	51798465	.	T	TAG	1935.02	PASS	AB=0.905;AC=33;AF=0.635;AN=52;BaseQRankSum=1.404;DP=582;FS=18.196;HRun=0;HaplotypeScore=112.3729;InbreedingCoeff=0.1692;MQ=69.95;MQ0=13;MQRankSum=0.673;QD=4.52;ReadPosRankSum=-2.806;VQSLOD=1.1779;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	1/1:13,0:13:10.96:176,11,0	./.	0/1:40,0:15:0.17:0,0,0	0/0:23,0:24:5.79:0,6,222	0/0:22,0:26:31.20:0,31,247	0/0:12,0:16:20.55:0,21,174	1/1:22,0:22:14.50:98,14,0	0/1:13,5:17:50.62:120,0,51	0/1:16,17:34:11.82:405,0,12	0/1:13,6:18:28.95:36,0,29	1/1:16,0:15:6:51,6,0	1/1:17,0:17:1.75:41,2,0	0/1:17,1:18:38.15:38,0,221	0/1:19,0:19:34.78:96,0,35	0/1:12,0:12:52.93:113,0,53	1/1:18,0:19:5.99:50,6,0	0/1:17,0:17:11.94:47,0,12	1/1:16,0:16:11.20:176,11,0	1/1:11,1:24:12.02:131,12,0	1/1:19,0:19:18.03:163,18,0	1/1:22,0:22:9:77,9,0	1/1:20,0:20:8.86:116,9,0	1/1:14,0:13:2.79:41,3,0	0/0:22,0:23:9.44:0,9,272	0/1:27,0:27:48.57:49,0,138	1/1:11,0:22:9.47:80,9,0	0/0:14,0:12:23.73:0,24,226
chr10	51800765	.	GC	G	1977.30	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.784;DP=587;FS=10.608;HRun=2;HaplotypeScore=77.2036;InbreedingCoeff=0.9981;MQ=82.28;MQ0=0;MQRankSum=-1.748;QD=29.96;ReadPosRankSum=2.738;VQSLOD=2.3412;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,105,1572	1/1:0,9:9:21.07:272,21,0	0/0:15,0:15:43.35:0,43,556	0/0:17,0:17:29.34:0,29,427	0/0:18,0:18:54.18:0,54,808	0/0:20,0:20:60.20:0,60,893	0/0:21,0:21:63.20:0,63,923	0/0:29,0:29:84.27:0,84,1222	0/0:15,0:15:42.14:0,42,627	0/0:21,0:21:63.21:0,63,941	0/0:17,0:17:51.16:0,51,742	0/0:18,0:18:54.18:0,54,804	0/0:26,0:26:72.23:0,72,1050	0/0:16,0:16:48.16:0,48,717	1/1:0,29:29:69.22:894,69,0	1/1:2,26:28:75.14:954,75,0	0/0:31,0:31:93.27:0,93,1347	0/0:22,0:22:66.14:0,66,958	0/0:17,0:17:51.16:0,51,740	0/0:19,0:19:54.17:0,54,788	0/0:26,0:25:75.23:0,75,1100	0/0:13,0:13:39.13:0,39,577	0/0:15,0:15:45.14:0,45,649	0/0:29,0:29:87.29:0,87,1295	0/0:19,0:19:57.19:0,57,853	0/0:27,0:27:81.27:0,81,1190	0/0:25,0:25:75.25:0,75,1113	0/0:10,0:10:30.10:0,30,449
chr10	51801426	.	G	GA	5940.51	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-9.876;DP=707;FS=5.529;HRun=7;HaplotypeScore=75.2574;InbreedingCoeff=0.9999;MQ=75.24;MQ0=1;MQRankSum=-2.413;QD=28.29;ReadPosRankSum=3.916;VQSLOD=5.5456;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,0:30:57.50:292,58,0	0/0:12,0:12:36.06:0,36,348	0/0:36,1:31:57.22:0,57,487	0/0:22,0:18:35.48:0,35,332	0/0:29,0:29:72.11:0,72,692	0/0:22,0:22:57.09:0,57,550	0/0:15,0:15:42.07:0,42,406	0/0:33,0:33:81.12:0,81,778	0/0:23,0:23:63.09:0,63,608	0/0:28,0:28:72.10:0,72,692	0/0:14,0:14:39.05:0,39,370	1/1:1,17:18:51.16:616,51,0	1/1:4,22:27:75.07:868,75,0	0/0:18,0:18:51.07:0,51,487	0/0:24,0:24:59.98:0,60,555	0/0:28,0:28:81.13:0,81,782	1/1:1,25:26:69.21:834,69,0	1/1:4,25:29:69.21:833,69,0	0/0:28,0:28:78.10:0,78,744	0/0:41,0:41:99:0,111,1071	0/0:16,0:16:36.05:0,36,348	1/1:2,28:30:78.24:941,78,0	1/1:1,33:34:93.29:1123,93,0	1/1:3,12:15:36.11:432,36,0	0/0:26,0:26:72.09:0,72,684	0/0:21,0:22:59.11:0,59,552	0/0:35,0:35:84.11:0,84,805	0/0:23,0:23:66.08:0,66,626
chr10	51803876	.	A	AT	1359.27	PASS	AB=0.923;AC=9;AF=0.161;AN=56;BaseQRankSum=-8.488;DP=585;FS=2.442;HRun=10;HaplotypeScore=63.3055;InbreedingCoeff=0.8625;MQ=78.66;MQ0=0;MQRankSum=-2.613;QD=17.65;ReadPosRankSum=1.156;VQSLOD=4.3833;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,22:24:60.15:639,60,0	1/1:2,8:10:21.05:224,21,0	0/0:22,0:22:24:0,24,266	0/0:16,0:16:12.62:0,13,201	0/0:26,0:26:65.89:0,66,542	0/0:26,0:26:71.86:0,72,585	0/0:15,0:16:23.14:0,23,280	0/0:36,0:37:82.88:0,83,663	0/0:20,0:21:41.93:0,42,345	0/0:19,0:20:49.77:0,50,389	0/0:19,0:20:43.95:0,44,351	0/0:17,0:17:47.94:0,48,394	0/0:16,0:16:44.91:0,45,362	0/0:20,0:20:50.91:0,51,413	1/1:4,15:19:14.47:359,14,0	1/1:1,11:12:27.07:288,27,0	0/0:20,0:20:59.93:0,60,493	0/0:28,0:28:65.86:0,66,536	0/0:18,0:18:32.94:0,33,271	0/0:26,0:26:68.84:0,69,557	0/1:11,1:12:11.03:11,0,127	0/0:24,0:24:62.90:0,63,513	0/0:20,0:20:59.91:0,60,489	0/0:17,0:17:41.91:0,42,341	0/0:25,0:25:56.86:0,57,464	0/0:33,0:33:80.87:0,81,662	0/0:25,1:25:33.83:0,34,474	0/0:13,0:14:35:0,35,277
chr10	51804656	.	C	CACAGAG	6583.90	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-6.284;DP=847;FS=2.169;HRun=0;HaplotypeScore=176.7068;InbreedingCoeff=0.9839;MQ=59.54;MQ0=8;MQRankSum=-11.712;QD=30.06;ReadPosRankSum=0.360;VQSLOD=4.5965;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:69.18:0,69,1306	0/0:11,0:11:18.06:0,18,377	0/0:30,0:18:17.97:0,18,296	0/0:38,0:29:26.69:0,27,363	0/0:31,0:31:60.19:0,60,1215	0/0:34,0:34:69.05:0,69,1136	0/0:18,0:18:23.24:0,23,399	0/0:41,0:41:54.16:0,54,957	0/0:36,0:36:90.25:0,90,1673	0/0:41,0:41:93.30:0,93,1827	0/0:18,0:18:42.12:0,42,802	1/1:10,32:44:66.23:2118,66,0	1/1:9,27:39:57.20:1851,57,0	0/0:19,0:19:27.09:0,27,559	0/0:39,0:39:84.24:0,84,1641	0/0:36,0:36:69.18:0,69,1239	1/1:14,9:23:18.53:584,19,0	1/1:10,11:22:14.07:400,14,0	0/0:26,0:24:42.11:0,42,788	0/0:30,0:30:66.17:0,66,1228	0/0:36,0:36:72.23:0,72,1442	1/1:10,24:36:27.09:851,27,0	1/1:7,13:23:12.04:371,12,0	1/1:25,7:31:18.01:409,18,0	0/0:22,0:22:48.16:0,48,1004	0/0:32,0:31:57.19:0,57,1135	0/0:32,0:32:69.20:0,69,1365	0/0:15,0:15:45.13:0,45,838
chr10	51806278	.	T	TTGTGTG	704.51	PASS	AB=0.647;AC=7;AF=0.125;AN=56;BaseQRankSum=5.986;DP=517;FS=7.293;HRun=0;HaplotypeScore=116.6071;InbreedingCoeff=0.7958;MQ=62.59;MQ0=8;MQRankSum=-5.136;QD=14.99;ReadPosRankSum=-1.171;VQSLOD=2.4112;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:26:48.12:0,48,891	1/1:1,0:3:3.01:78,3,0	0/0:29,0:15:24.08:0,24,484	0/0:23,0:13:10.17:0,10,212	0/0:18,0:20:48.15:0,48,941	0/0:14,0:14:36.09:0,36,670	0/0:19,0:19:42.14:0,42,847	0/0:24,0:26:40.21:0,40,949	0/0:18,0:18:36.11:0,36,723	0/0:28,0:27:51.17:0,51,1034	0/0:18,0:18:38.91:0,39,759	0/0:16,0:16:33.11:0,33,696	0/0:18,0:18:48.15:0,48,973	0/0:14,0:15:30.10:0,30,611	1/1:10,0:12:6.02:138,6,0	1/1:6,1:21:24.08:597,24,0	0/0:9,0:28:22.26:0,22,180	0/1:5,0:10:1.47:22,0,1	0/0:14,0:13:33.11:0,33,631	0/0:19,0:20:54.18:0,54,1085	0/0:15,0:15:36.01:0,36,583	0/0:6,0:6:15.04:0,15,278	0/0:11,0:12:27.08:0,27,498	0/0:22,0:23:54.17:0,54,1078	0/0:25,0:26:66.22:0,66,1309	0/0:18,0:20:54.18:0,54,1059	0/0:18,0:19:39.13:0,39,784	0/0:16,0:16:42.14:0,42,883
chr10	51806495	.	A	ATT	1466.12	PASS	AB=1.000;AC=11;AF=0.204;AN=54;BaseQRankSum=-0.931;DP=408;FS=0.548;HRun=5;HaplotypeScore=59.4253;InbreedingCoeff=0.4730;MQ=76.41;MQ0=0;MQRankSum=-0.983;QD=12.02;ReadPosRankSum=-0.205;VQSLOD=-0.6730;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,0:22:50.91:462,51,0	./.	0/0:12,0:12:10.46:0,10,111	0/0:8,0:8:11.58:0,12,93	0/0:23,0:23:63.10:0,63,714	0/0:28,0:28:81.20:0,81,975	0/0:7,0:7:21.05:0,21,253	0/0:32,0:32:69.45:0,69,966	0/0:13,0:13:33.05:0,33,377	0/0:20,0:20:51.08:0,51,586	0/0:19,0:19:27.35:0,27,528	0/1:19,0:19:64.69:65,0,87	0/1:23,0:23:68.38:68,0,112	0/0:16,0:16:45.09:0,45,517	0/0:0,0:2:5.42:0,5,22	0/1:4,0:4:0:0,0,0	1/1:2,16:18:36.12:630,36,0	1/1:2,10:12:12.55:356,13,0	0/0:17,0:17:42.05:0,42,458	0/0:13,0:13:30.05:0,30,352	0/0:10,0:10:27.07:0,27,330	0/1:11,0:11:28.44:33,0,28	0/1:13,0:13:7.05:7,0,75	0/0:4,0:4:10.47:0,10,41	0/0:15,0:15:39.07:0,39,453	0/0:10,0:10:27.08:0,27,344	0/0:23,0:22:66.12:0,66,765	0/0:14,0:14:38.98:0,39,416
chr10	51809474	.	T	TA	2265.44	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=-8.441;DP=605;FS=3.451;HRun=9;HaplotypeScore=55.4071;InbreedingCoeff=0.8837;MQ=74.56;MQ0=1;MQRankSum=0.690;QD=19.70;ReadPosRankSum=1.161;VQSLOD=4.0128;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:98.97:0,99,859	0/0:5,0:5:12:0,12,104	0/1:18,0:14:5.75:6,0,41	0/0:12,0:10:14.97:0,15,124	0/0:31,0:31:74.98:0,75,651	0/0:20,0:20:53.96:0,54,464	0/0:6,0:6:9:0,9,78	0/0:40,0:40:99:0,102,885	0/0:21,0:21:50.95:0,51,434	0/0:35,0:35:92.96:0,93,807	0/0:23,0:23:62.97:0,63,543	1/1:4,16:20:48.12:524,48,0	1/1:4,14:18:33.09:365,33,0	0/0:19,0:19:41.98:0,42,364	0/0:13,0:13:29.99:0,30,260	0/0:14,0:14:32.99:0,33,287	0/0:19,0:19:41.97:0,42,361	0/0:28,0:28:74.98:0,75,651	0/0:24,0:24:68.96:0,69,593	0/0:28,0:28:80.97:0,81,699	0/0:14,0:14:35.98:0,36,309	1/1:3,14:17:42.11:465,42,0	1/1:3,30:33:84.19:915,84,0	1/1:2,6:8:15.04:166,15,0	0/0:31,0:32:91.80:0,92,787	0/0:27,0:27:71.97:0,72,625	0/0:27,0:27:68.97:0,69,599	0/0:15,0:15:35.99:0,36,312
chr10	51811579	.	CT	C	2201.21	PASS	AB=0.797;AC=23;AF=0.411;AN=56;BaseQRankSum=11.175;DP=393;FS=2.710;HRun=9;HaplotypeScore=39.9907;InbreedingCoeff=0.7788;MQ=71.90;MQ0=0;MQRankSum=-1.163;QD=17.61;ReadPosRankSum=3.215;VQSLOD=3.4208;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,7:8:18:165,18,0	1/1:1,9:10:21:192,21,0	0/1:5,1:6:6.89:7,0,141	0/1:10,0:10:7.94:8,0,85	0/0:27,1:28:41.74:0,42,734	0/0:24,0:24:66.20:0,66,762	0/0:10,0:10:24.06:0,24,268	0/0:25,0:25:60.17:0,60,683	0/0:14,1:15:11.65:0,12,388	0/0:17,0:17:45.08:0,45,489	0/0:16,0:16:45.13:0,45,519	0/1:1,7:8:13.60:144,0,14	1/1:2,8:10:24.01:220,24,0	0/0:14,0:14:42.10:0,42,465	1/1:0,16:16:45.02:412,45,0	1/1:1,7:8:21.01:192,21,0	1/1:2,9:11:9.25:226,9,0	1/1:0,14:14:36.01:329,36,0	0/0:15,0:15:42.12:0,42,477	0/0:23,1:24:38.73:0,39,700	0/0:6,0:6:15.04:0,15,173	1/1:2,5:7:12:110,12,0	1/1:0,7:7:21.01:192,21,0	1/1:1,9:10:24.01:220,24,0	0/0:9,0:9:24.07:0,24,277	0/0:29,0:29:84.24:0,84,955	0/0:21,0:21:60.17:0,60,683	0/0:14,1:15:17.58:0,18,427
chr10	51811821	.	T	TA	742.37	PASS	AB=0.821;AC=15;AF=0.268;AN=56;BaseQRankSum=-0.057;DP=518;FS=1.134;HRun=13;HaplotypeScore=63.1184;InbreedingCoeff=0.4797;MQ=63.22;MQ0=8;MQRankSum=1.680;QD=4.03;ReadPosRankSum=-0.166;VQSLOD=0.6529;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:29:66.87:67,0,82	0/0:0,0:8:16.30:0,16,48	0/1:20,0:12:5.29:7,0,5	0/1:19,0:13:0:0,0,0	0/0:33,1:36:5.38:0,5,403	0/0:22,0:21:31.55:0,32,297	0/0:7,0:7:20.73:0,21,136	0/0:25,1:30:12.69:0,13,312	0/0:18,0:20:16.25:0,16,221	0/0:25,0:24:44.42:0,44,303	0/0:19,0:23:40.13:0,40,256	0/1:3,4:7:25.94:44,0,26	1/1:3,11:12:23.60:184,24,0	0/0:13,0:13:20.67:0,21,139	0/0:3,0:12:20.37:0,20,60	0/0:6,0:16:16.27:0,16,48	1/1:4,0:15:17.04:86,17,0	1/1:7,1:18:14.37:85,14,0	0/1:16,2:19:8.83:9,0,154	0/0:23,0:24:21.58:0,22,275	0/0:8,0:8:20.81:0,21,142	1/1:2,12:14:27.87:244,28,0	0/1:7,8:15:27:68,0,27	0/1:2,8:10:0.78:121,0,1	0/0:16,0:16:38.64:0,39,265	0/0:25,0:26:61.41:0,61,412	0/0:23,0:25:34.32:0,34,333	0/0:19,1:19:16.64:0,17,249
chr10	51812678	.	C	CCATT	233.54	PASS	AB=0.765;AC=1;AF=0.018;AN=56;BaseQRankSum=-3.451;DP=620;FS=13.158;HRun=0;HaplotypeScore=97.6908;InbreedingCoeff=-0.0182;MQ=88.73;MQ0=0;MQRankSum=-3.434;QD=17.96;ReadPosRankSum=1.111;VQSLOD=2.0966;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:48.16:0,48,1000	0/0:11,0:11:33.11:0,33,668	0/0:24,0:24:69.23:0,69,1345	0/0:21,0:21:63.14:0,63,1169	0/0:21,0:21:63.22:0,63,1316	0/0:29,0:28:84.29:0,84,1737	0/0:15,0:15:45.14:0,45,900	0/0:40,0:40:99:0,111,2239	0/0:17,0:17:51.18:0,51,1052	0/0:20,0:20:54.19:0,54,1133	0/0:35,0:35:99:0,102,2092	0/0:25,0:25:75.24:0,75,1535	0/0:22,0:22:66.23:0,66,1380	0/0:19,0:19:57.20:0,57,1192	0/0:23,0:23:69.21:0,69,1398	0/0:24,0:24:69.23:0,69,1386	0/0:10,0:10:30.10:0,30,601	0/1:9,4:13:99:308,0,523	0/0:17,0:17:48.16:0,48,961	0/0:21,0:21:63.20:0,63,1233	0/0:21,0:21:63.22:0,63,1297	0/0:15,0:15:45.14:0,45,907	0/0:29,0:29:87.28:0,87,1761	0/0:20,0:20:57.19:0,57,1122	0/0:22,0:21:63.22:0,63,1317	0/0:30,0:30:90.31:0,90,1873	0/0:39,0:39:99:0,111,2287	0/0:21,0:21:57.19:0,57,1169
chr10	51813095	.	C	CCTCT	1283.33	PASS	AB=0.991;AC=14;AF=0.250;AN=56;BaseQRankSum=7.906;DP=627;FS=11.114;HRun=0;HaplotypeScore=139.8920;InbreedingCoeff=0.6056;MQ=72.48;MQ0=11;MQRankSum=1.340;QD=6.29;ReadPosRankSum=0.985;VQSLOD=2.2799;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:27:51.63:0,52,730	0/0:10,0:11:10.74:0,11,282	0/1:44,0:22:7.04:7,0,112	0/0:31,0:20:14.88:0,15,139	0/0:28,0:28:56.63:0,57,850	0/0:18,0:19:32.43:0,32,664	0/0:19,0:19:48.01:0,48,749	0/0:25,0:24:38.99:0,39,528	0/0:24,0:24:39.10:0,39,595	0/0:28,0:28:51.17:0,51,837	0/0:19,0:18:26.45:0,26,448	1/1:12,11:24:15.77:287,16,0	1/1:18,3:25:32.99:465,33,0	0/0:17,0:17:35.89:0,36,572	0/1:24,0:26:20.13:20,0,102	0/1:20,0:20:9.53:10,0,413	0/0:11,0:11:9.83:0,10,385	0/1:6,0:6:11.34:11,0,76	0/0:18,0:16:21.05:0,21,323	0/0:20,0:20:45.12:0,45,695	0/0:36,0:37:69.20:0,69,1069	1/1:10,1:14:9:124,9,0	1/1:20,6:26:14.35:139,14,0	1/1:13,1:18:27.06:399,27,0	0/0:14,0:14:15.75:0,16,423	0/0:24,0:24:60.20:0,60,986	0/0:28,0:27:69.12:0,69,1057	0/0:18,0:18:17.60:0,18,299
chr10	51813112	.	CTG	C	591.99	PASS	AB=0.939;AC=8;AF=0.143;AN=56;BaseQRankSum=6.820;DP=655;FS=2.877;HRun=0;HaplotypeScore=119.6880;InbreedingCoeff=0.4268;MQ=57.49;MQ0=15;MQRankSum=0.672;QD=4.05;ReadPosRankSum=-2.326;VQSLOD=2.6503;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:28:65.82:0,66,999	0/0:12,0:12:10.86:0,11,290	0/1:36,0:11:7.04:7,0,104	0/0:30,0:11:8.96:0,9,134	0/0:30,0:29:65.14:0,65,1047	0/0:21,0:21:41.35:0,41,782	0/0:21,0:21:56.96:0,57,925	0/0:24,0:24:58.53:0,59,725	0/0:18,0:18:46.32:0,46,697	0/0:30,0:30:82.47:0,82,1182	0/0:19,0:18:33.08:0,33,548	0/1:23,0:23:37.06:72,0,37	0/1:17,4:21:1.01:186,0,1	0/0:20,0:20:48.08:0,48,741	0/0:28,0:28:7.40:0,7,223	0/0:20,0:20:41.87:0,42,757	0/0:13,0:13:36.03:0,36,565	0/0:4,0:4:9:0,9,162	0/0:20,0:16:20.01:0,20,441	0/0:33,0:33:78.12:0,78,1029	0/0:41,0:39:38.51:0,39,1243	0/1:20,2:22:10.50:43,0,11	1/1:22,4:25:16.94:148,17,0	1/1:11,7:18:3.35:271,3,0	0/0:16,0:16:16.97:0,17,499	0/0:25,0:25:71.52:0,72,1211	0/0:38,0:37:98.04:0,98,1480	0/0:14,0:14:21.75:0,22,387
chr10	51813130	.	CTG	C	596.01	PASS	AB=0.889;AC=9;AF=0.161;AN=56;BaseQRankSum=6.842;DP=741;FS=7.827;HRun=0;HaplotypeScore=131.2005;InbreedingCoeff=-0.1694;MQ=50.50;MQ0=32;MQRankSum=1.631;QD=2.79;ReadPosRankSum=-3.429;VQSLOD=1.1253;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:29:65.93:0,66,907	0/0:6,0:6:4.23:0,4,24	0/0:51,0:6:5.05:0,5,103	0/0:62,0:8:14.16:0,14,261	0/0:28,0:27:52.25:0,52,779	0/0:26,0:26:11.63:0,12,697	0/0:20,0:20:43.97:0,44,681	0/0:28,0:28:54.08:0,54,730	0/0:16,0:16:24.94:0,25,573	0/0:32,0:32:55.28:0,55,1215	0/0:29,0:28:12.18:0,12,293	0/1:20,4:23:56.52:111,0,57	0/1:18,5:23:99:198,0,102	0/0:21,0:21:17.23:0,17,490	0/0:28,0:28:12.67:0,13,140	0/0:20,0:20:15.76:0,16,357	0/1:14,0:14:58.93:59,0,77	0/0:2,0:2:5.99:0,6,66	0/1:20,0:17:42.97:43,0,302	0/0:40,0:40:85.54:0,86,1438	0/1:45,0:43:1.42:1,0,1072	0/1:11,19:30:75.93:77,0,76	0/1:17,8:25:7.09:102,0,7	0/1:17,1:18:99:122,0,113	0/0:18,0:18:35.94:0,36,618	0/0:28,0:28:12.88:0,13,582	0/0:38,0:37:65.61:0,66,1334	0/1:14,0:14:16.41:16,0,331
chr10	51813132	.	GTC	G	797.43	PASS	AB=0.927;AC=19;AF=0.339;AN=56;BaseQRankSum=4.641;DP=746;FS=0.000;HRun=0;HaplotypeScore=127.5541;InbreedingCoeff=-0.3436;MQ=50.61;MQ0=33;MQRankSum=3.144;QD=1.90;ReadPosRankSum=-1.830;VQSLOD=2.1684;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:29:47.96:0,48,431	0/0:5,0:5:0:0,0,0	0/0:55,0:7:14.80:0,15,115	0/0:64,0:8:18.06:0,18,254	0/0:23,5:27:1.47:0,1,471	0/1:24,1:25:76.74:77,0,579	0/0:20,0:20:1.56:0,2,464	0/0:28,1:29:1.48:0,1,415	0/1:14,3:17:33.18:33,0,425	0/1:32,3:35:17.11:17,0,980	0/0:12,1:30:21.36:0,21,226	0/1:26,0:25:35.26:35,0,103	0/1:23,0:23:60.26:61,0,60	0/1:19,2:21:64.99:65,0,324	0/1:27,1:28:2.37:2,0,31	0/1:14,5:19:51.79:52,0,79	1/1:10,2:12:0.39:157,0,0	0/0:2,0:2:2.96:0,3,19	0/1:15,5:18:99:102,0,266	0/0:42,0:42:50.19:0,50,1132	0/1:44,2:44:86.16:86,0,822	0/1:30,0:30:29.80:30,0,48	1/1:25,0:24:5.91:42,6,0	0/1:13,0:15:12.59:52,0,13	0/0:16,1:17:1.37:0,1,447	0/1:26,2:28:64.77:65,0,341	0/1:31,5:36:31.71:32,0,874	0/1:13,1:14:37.19:37,0,256
chr10	51813134	.	C	CTCTG	1372.33	PASS	AB=0.994;AC=20;AF=0.357;AN=56;BaseQRankSum=6.867;DP=760;FS=7.558;HRun=0;HaplotypeScore=149.3005;InbreedingCoeff=0.1566;MQ=50.44;MQ0=35;MQRankSum=0.640;QD=4.25;ReadPosRankSum=-1.964;VQSLOD=1.8283;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:29:77.27:77,0,265	1/1:1,5:6:0.75:2,1,0	0/0:56,0:7:17.24:0,17,138	0/0:66,0:8:21:0,21,269	0/0:28,0:28:21.58:0,22,692	0/1:26,0:26:30.67:31,0,756	0/0:20,0:20:16.38:0,16,635	0/0:31,0:31:14.67:0,15,682	0/1:19,0:19:18.21:18,0,582	0/1:36,0:36:1.99:2,0,1237	0/0:32,0:31:25.01:0,25,305	0/1:26,0:25:50.55:125,0,51	0/1:23,0:23:36.79:84,0,37	0/0:20,0:20:2.43:0,2,501	1/1:5,23:29:14.80:222,15,0	0/1:19,0:19:44.06:355,0,44	1/1:11,1:12:32.22:390,32,0	1/1:2,0:2:5.99:100,6,0	0/1:20,0:18:11.18:11,0,399	0/0:42,0:42:92.21:0,92,1434	0/0:45,0:43:26.46:0,26,1244	0/1:30,0:30:16.11:16,0,55	1/1:26,0:25:4.27:29,4,0	0/1:15,0:16:0.99:79,0,1	0/0:17,0:17:10.47:0,10,591	0/0:28,0:28:5.60:0,6,641	0/0:38,0:38:16.67:0,17,1208	0/0:14,0:14:25.04:0,25,426
chr10	51813162	.	GAC	G	429.74	PASS	AB=0.964;AC=6;AF=0.107;AN=56;BaseQRankSum=4.805;DP=788;FS=23.572;HRun=0;HaplotypeScore=117.5947;InbreedingCoeff=0.5167;MQ=52.72;MQ0=49;MQRankSum=-0.581;QD=7.67;ReadPosRankSum=0.003;VQSLOD=1.5063;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:29:42.97:0,43,653	0/0:8,0:8:15.05:0,15,245	0/0:77,0:10:12.04:0,12,170	0/0:80,0:11:12.04:0,12,177	0/0:23,0:23:45.14:0,45,688	0/1:24,0:24:15.33:15,0,704	0/0:21,0:21:45.15:0,45,713	0/0:25,1:26:10.25:0,10,581	0/0:24,0:24:63.11:0,63,951	0/0:38,1:39:41.48:0,41,1420	0/0:32,1:33:10.49:0,10,684	0/0:30,0:29:56.94:0,57,861	0/0:20,0:20:41.94:0,42,644	0/0:21,0:21:51.14:0,51,753	0/0:26,0:26:28.71:0,29,460	0/0:17,0:17:23.76:0,24,340	1/1:4,12:16:39.12:478,39,0	1/1:1,1:3:5.81:50,6,0	0/0:22,0:21:46.32:0,46,621	0/0:39,3:42:50.39:0,50,1278	0/0:43,0:43:90.16:0,90,1341	0/0:34,1:35:5.46:0,5,568	0/0:27,0:26:35.99:0,36,560	0/1:12,1:13:12.84:13,0,315	0/0:21,0:21:54.10:0,54,847	0/0:20,0:20:59.88:0,60,872	0/0:35,0:35:85.69:0,86,1287	0/0:11,0:11:16.92:0,17,312
chr10	51813296	.	A	ACTATCTATCTAT	2088.51	PASS	AB=0.733;AC=18;AF=0.321;AN=56;BaseQRankSum=1.266;DP=698;FS=2.115;HRun=0;HaplotypeScore=253.1616;InbreedingCoeff=0.8577;MQ=55.41;MQ0=6;MQRankSum=0.912;QD=9.04;ReadPosRankSum=-1.743;VQSLOD=1.6626;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:11,10:22:0:0,0,0	1/1:10,0:19:20.89:444,21,0	0/0:29,0:19:18.05:0,18,274	0/0:18,0:13:9.03:0,9,147	0/0:30,0:30:63.22:0,63,1861	0/0:18,0:18:39.13:0,39,1349	0/0:21,0:22:42.62:0,43,1130	0/0:22,0:22:25.87:0,26,380	0/0:22,0:22:42.14:0,42,1176	0/0:38,0:38:54.17:0,54,1352	0/0:28,0:28:54.17:0,54,1634	1/1:8,0:22:4.80:12,5,0	1/1:22,0:30:21.84:419,22,0	0/0:26,0:26:57.19:0,57,1646	1/1:22,0:33:11.66:257,12,0	1/1:22,0:34:15.10:243,15,0	0/0:23,0:23:36.12:0,36,1049	0/0:18,0:17:30.10:0,30,910	0/0:18,0:14:18.06:0,18,564	0/0:37,0:37:54.17:0,54,1384	0/0:19,0:19:39.11:0,39,996	1/1:17,0:23:12.04:265,12,0	1/1:20,0:29:18.99:313,19,0	1/1:9,0:15:15.05:325,15,0	0/0:22,0:22:39.13:0,39,1263	0/0:32,0:32:78.25:0,78,2310	0/0:45,0:45:87.30:0,87,2703	0/1:3,0:4:5.41:5,0,199
chr10	51814077	.	CT	C	8073.92	PASS	AB=0.895;AC=54;AF=0.964;AN=56;BaseQRankSum=-5.065;DP=376;FS=1.184;HRun=2;HaplotypeScore=65.7111;InbreedingCoeff=-0.0688;MQ=57.13;MQ0=13;MQRankSum=1.559;QD=21.47;ReadPosRankSum=3.029;VQSLOD=4.8530;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,23:24:60.10:775,60,0	1/1:0,2:2:6.02:77,6,0	0/1:33,4:12:70.49:70,0,145	0/1:41,6:14:42.27:132,0,42	1/1:1,8:9:12.04:155,12,0	1/1:1,9:10:25.59:296,26,0	1/1:2,18:19:31.49:425,31,0	1/1:4,9:12:6.68:314,7,0	1/1:1,12:13:33.09:413,33,0	1/1:3,11:13:33.06:409,33,0	1/1:0,10:10:21.07:272,21,0	1/1:2,4:6:12.04:149,12,0	1/1:2,5:7:12.03:139,12,0	1/1:2,12:14:39:464,39,0	1/1:2,8:10:27.02:328,27,0	1/1:0,10:10:27.08:340,27,0	1/1:2,9:10:21.07:268,21,0	1/1:1,7:8:21.07:272,21,0	1/1:0,10:10:26.97:295,27,0	1/1:0,6:6:6.02:77,6,0	1/1:3,36:39:83.85:1063,84,0	1/1:1,7:7:8.23:115,8,0	1/1:0,4:3:2.76:39,3,0	1/1:3,10:11:18.06:230,18,0	1/1:0,6:6:18.02:214,18,0	1/1:1,17:17:45.13:568,45,0	1/1:0,3:3:9.03:116,9,0	1/1:0,3:3:5.99:60,6,0
chr10	51814078	.	TTC	T	48.29	PASS	AB=0.934;AC=13;AF=0.232;AN=56;BaseQRankSum=0.932;DP=381;FS=36.314;HRun=0;HaplotypeScore=99.5165;InbreedingCoeff=-0.0520;MQ=57.80;MQ0=12;MQRankSum=-2.791;QD=0.33;ReadPosRankSum=-3.632;VQSLOD=-0.6289;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:26.79:0,27,108	0/0:2,0:2:2.49:0,2,7	0/0:38,0:13:7.34:0,7,235	0/0:48,0:15:20.07:0,20,148	0/0:9,0:9:5.75:0,6,32	0/1:10,0:10:5.21:5,0,32	0/0:20,1:20:17.36:0,17,62	0/0:14,0:12:3.79:0,4,66	0/1:12,1:13:15.02:17,0,15	0/1:12,1:13:14.66:15,0,15	0/0:10,0:10:11.35:0,11,43	0/1:6,1:7:2.57:11,0,3	0/1:6,1:7:17.36:17,0,52	0/1:13,1:14:8.76:9,0,16	0/1:9,1:10:5.45:19,0,5	0/0:10,0:10:2.52:0,3,15	0/0:11,0:10:9.82:0,10,25	0/0:7,0:7:8.72:0,9,22	0/1:10,0:10:4.94:29,0,5	0/0:6,0:6:2.49:0,2,7	0/1:38,2:40:24.12:24,0,39	0/0:8,0:7:4.21:0,4,10	0/0:5,0:4:1.25:0,1,4	0/1:12,2:12:9.70:10,0,10	0/1:6,0:6:6.17:10,0,6	0/0:18,0:17:13.12:0,13,45	0/0:3,0:3:3.74:0,4,9	1/1:3,0:3:1.13:18,1,0
chr10	51814117	.	TTGTGAG	T	837	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=9.341;DP=555;FS=0.000;HRun=0;HaplotypeScore=168.8577;InbreedingCoeff=0.7262;MQ=71.80;MQ0=7;MQRankSum=-5.863;QD=6.20;ReadPosRankSum=-0.241;VQSLOD=2.4049;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:32:69.02:0,69,1338	0/1:8,0:8:5.97:6,0,114	0/0:47,0:22:37.90:0,38,670	0/0:52,0:26:24.40:0,24,551	0/0:13,0:13:33.09:0,33,1004	0/0:17,0:17:48.12:0,48,1303	0/0:22,0:22:42.02:0,42,977	0/0:19,0:19:26.37:0,26,917	0/0:26,0:26:63.11:0,63,1808	0/0:27,0:27:80.58:0,81,2181	0/0:20,0:20:51.15:0,51,1470	1/1:16,0:16:17.74:72,18,0	1/1:18,0:18:16.55:140,17,0	0/0:25,0:25:59.84:0,60,1685	0/1:15,0:15:28.90:29,0,115	0/1:15,0:15:14.30:14,0,233	1/1:14,0:14:38.09:259,38,0	1/1:10,0:10:19.69:137,20,0	0/0:15,0:14:32.81:0,33,546	0/0:9,0:9:27.08:0,27,829	0/0:48,0:48:95.20:0,95,2174	1/1:9,4:13:22.77:237,23,0	1/1:11,0:11:11.63:42,12,0	1/1:14,1:14:18.75:98,19,0	0/0:10,0:9:24.08:0,24,784	0/0:21,0:21:57.14:0,57,1355	0/0:15,0:15:45.14:0,45,1435	0/0:1,0:1:3.01:0,3,58
chr10	51814118	.	TGTGA	T	2964.97	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=5.664;DP=553;FS=0.000;HRun=0;HaplotypeScore=141.7081;InbreedingCoeff=0.8796;MQ=71.07;MQ0=8;MQRankSum=-4.597;QD=22.13;ReadPosRankSum=0.498;VQSLOD=2.8365;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:68.87:0,69,1113	1/1:8,0:8:1.90:22,2,0	0/0:46,0:21:38.85:0,39,592	0/0:53,0:26:27.70:0,28,497	0/0:15,0:15:38.78:0,39,860	0/0:17,0:17:47.89:0,48,1000	0/0:23,0:23:21.49:0,21,737	0/0:19,0:19:23.96:0,24,734	0/0:26,0:26:63.10:0,63,1413	0/0:27,0:27:80.52:0,81,1744	0/0:20,0:20:51.07:0,51,1121	1/1:5,11:16:26.90:463,27,0	1/1:2,16:18:47.75:851,48,0	0/0:25,0:25:59.09:0,59,1288	1/1:15,0:15:3.88:45,4,0	1/1:14,0:14:1.28:41,1,0	1/1:5,9:14:38.85:543,39,0	1/1:2,8:10:21.04:315,21,0	0/0:15,0:14:32.76:0,33,426	0/0:9,0:9:27.08:0,27,660	0/0:45,0:45:95.28:0,95,1723	1/1:9,4:13:21.04:288,21,0	1/1:0,11:11:15.05:267,15,0	1/1:8,7:14:20.74:332,21,0	0/0:10,0:9:24.08:0,24,608	0/0:20,0:20:57.11:0,57,1072	0/0:15,0:15:45.05:0,45,1092	0/0:1,0:1:3.01:0,3,58
chr10	51814120	.	TGA	T	2294.54	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=8.574;DP=552;FS=6.653;HRun=0;HaplotypeScore=123.3719;InbreedingCoeff=0.9534;MQ=69.37;MQ0=8;MQRankSum=-2.715;QD=17.38;ReadPosRankSum=0.885;VQSLOD=3.3870;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:33.44:0,33,731	1/1:1,7:8:18.04:251,18,0	0/0:46,0:19:19.03:0,19,487	0/0:56,0:26:10.71:0,11,422	0/0:16,0:16:41.75:0,42,629	0/0:17,0:17:4.31:0,4,647	0/0:22,0:22:32.25:0,32,571	0/0:19,0:19:22.54:0,23,549	0/0:25,0:25:62.32:0,62,1023	0/0:27,0:27:60.04:0,60,1240	0/0:21,0:21:19.04:0,19,767	1/1:13,2:15:26.83:200,27,0	1/1:17,1:18:50.70:393,51,0	0/0:22,0:22:59.09:0,59,947	1/1:3,11:14:21.04:279,21,0	1/1:4,9:13:39.02:521,39,0	1/1:14,0:14:38.39:260,38,0	1/1:10,0:10:20.90:159,21,0	0/0:13,0:12:18.41:0,18,318	0/0:10,0:10:30.08:0,30,493	0/0:44,0:44:66.31:0,66,1172	1/1:14,0:14:23.87:181,24,0	1/1:11,0:11:14.90:109,15,0	1/1:15,0:14:20.90:159,21,0	0/0:11,0:10:27.08:0,27,470	0/0:19,0:19:49.15:0,49,802	0/0:15,0:15:17.11:0,17,745	0/0:3,0:3:9:0,9,103
chr10	51814122	.	AGT	A	906.91	PASS	AB=0.942;AC=27;AF=0.482;AN=56;BaseQRankSum=8.543;DP=564;FS=5.184;HRun=0;HaplotypeScore=129.4230;InbreedingCoeff=0.3762;MQ=67.97;MQ0=9;MQRankSum=-2.917;QD=2.64;ReadPosRankSum=1.220;VQSLOD=2.3677;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:35:41.01:0,41,334	1/1:8,0:8:14.90:108,15,0	0/1:46,0:18:5.83:6,0,141	0/0:58,1:27:11.53:0,12,145	0/0:16,0:16:36.12:0,36,558	0/1:15,2:17:27.58:28,0,486	0/1:22,1:23:16.14:16,0,369	0/1:17,1:18:11.09:11,0,306	0/0:28,0:28:19.24:0,19,740	0/1:26,2:28:1.09:1,0,881	0/1:17,3:21:22.15:22,0,589	1/1:15,0:15:20.24:82,20,0	1/1:18,0:18:41.21:180,41,0	0/0:22,0:22:45.15:0,45,707	1/1:14,0:14:14.89:105,15,0	1/1:13,0:13:29.79:218,30,0	1/1:14,0:14:14.89:74,15,0	1/1:10,0:10:11.60:47,12,0	0/1:12,1:12:23.08:23,0,129	0/0:10,0:10:26.98:0,27,391	0/1:40,3:44:39.31:39,0,775	0/1:14,0:14:3.37:41,0,3	1/1:11,0:11:12.27:48,12,0	1/1:16,0:15:10.92:52,11,0	0/0:10,0:9:27.09:0,27,423	0/0:20,1:21:6.94:0,7,513	0/0:15,1:15:8.56:0,9,580	0/0:3,0:3:9.03:0,9,133
chr10	51814556	.	ACATTTTG	A	3969.71	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=11.653;DP=658;FS=0.493;HRun=0;HaplotypeScore=163.7712;InbreedingCoeff=0.9906;MQ=81.36;MQ0=0;MQRankSum=-10.932;QD=44.60;ReadPosRankSum=1.233;VQSLOD=3.6421;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,29:32:45.08:1040,45,0	1/1:1,11:12:24.08:523,24,0	0/0:20,0:20:41.24:0,41,1382	0/0:17,0:17:31.95:0,32,1012	0/0:28,0:27:78.25:0,78,2842	0/0:30,0:30:75.24:0,75,2639	0/0:14,0:14:42.14:0,42,1563	0/0:38,0:38:99:0,108,4038	0/0:22,0:22:54.17:0,54,1943	0/0:30,0:30:78.27:0,78,2935	0/0:22,0:22:66.23:0,66,2505	0/0:22,0:22:66.21:0,66,2322	0/0:27,0:27:81.27:0,81,2965	0/0:25,0:25:72.22:0,72,2454	1/1:0,27:27:63.11:1403,63,0	1/1:1,17:18:42.08:1004,42,0	0/0:33,0:33:96.33:0,96,3713	0/0:10,0:10:30.09:0,30,1066	0/0:16,0:16:45.15:0,45,1681	0/0:31,0:31:90.31:0,90,3285	0/0:31,0:31:84.26:0,84,3036	0/0:32,0:32:93.31:0,93,3295	0/0:18,0:18:51.18:0,51,1829	0/0:24,0:24:69.24:0,69,2525	0/0:21,0:21:60.20:0,60,2186	0/0:21,0:21:60.21:0,60,2226	0/0:33,0:33:90.30:0,90,3349	0/0:4,0:4:12.04:0,12,452
chr10	51816014	.	G	GTCTC	5706.82	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-2.054;DP=583;FS=24.137;HRun=0;HaplotypeScore=101.0863;InbreedingCoeff=0.9899;MQ=76.53;MQ0=2;MQRankSum=-2.781;QD=33.97;ReadPosRankSum=3.210;VQSLOD=3.1064;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:90.31:0,90,1519	1/1:2,0:8:9.45:52,9,0	0/0:26,0:25:38.63:0,39,688	0/0:37,0:34:45.97:0,46,853	0/0:30,0:30:72.19:0,72,1217	0/0:20,0:20:45.12:0,45,707	0/0:18,0:18:39.09:0,39,627	0/0:28,0:28:66.18:0,66,1067	0/0:26,0:26:63.21:0,63,1069	0/0:23,0:23:57.16:0,57,911	0/0:18,0:18:51.16:0,51,839	1/1:4,18:23:56.93:1345,57,0	1/1:4,14:18:36.12:896,36,0	0/0:17,0:18:48.14:0,48,764	1/1:5,0:23:38.42:175,38,0	1/1:4,0:18:27.45:125,27,0	1/1:2,0:21:38.73:189,39,0	1/1:1,0:8:16.47:75,16,0	0/0:18,0:18:39.12:0,39,635	0/0:14,0:14:30.10:0,30,509	0/0:31,0:31:75.23:0,75,1217	1/1:3,11:14:33.11:819,33,0	1/1:0,17:17:51.18:1271,51,0	1/1:4,12:17:32.85:761,33,0	0/0:18,0:18:54.16:0,54,884	0/0:14,0:14:33.11:0,33,558	0/0:24,0:24:66.23:0,66,1120	0/0:14,0:14:39.12:0,39,637
chr10	51816493	.	C	CT	1120.12	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=6.262;DP=243;FS=3.525;HRun=9;HaplotypeScore=31.4351;InbreedingCoeff=0.8829;MQ=77.46;MQ0=0;MQRankSum=0.680;QD=13.18;ReadPosRankSum=3.428;VQSLOD=2.4028;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,13:17:14.13:373,14,0	1/1:8,0:8:16.68:94,17,0	0/0:8,0:7:8.98:0,9,74	0/0:5,0:5:2.99:0,3,25	0/0:10,0:10:23.99:0,24,208	0/0:8,0:9:20.03:0,20,162	0/0:7,1:8:18:0,18,156	0/0:20,0:20:44.97:0,45,391	0/0:5,0:5:8.99:0,9,78	0/0:17,0:17:44.98:0,45,391	0/0:7,0:7:17.99:0,18,156	1/1:5,0:5:8.04:33,8,0	1/1:10,0:10:16.07:66,16,0	0/0:8,0:8:21:0,21,182	1/1:4,0:4:8.83:54,9,0	1/1:6,0:6:16.81:96,17,0	1/1:2,9:11:27.07:298,27,0	1/1:4,6:10:18.05:199,18,0	0/0:14,0:14:32.98:0,33,283	0/0:13,0:13:32.97:0,33,282	0/0:8,0:8:17.71:0,18,156	1/1:6,0:6:15.91:64,16,0	1/1:5,0:5:8.04:33,8,0	1/1:3,0:3:5.36:22,5,0	0/0:4,0:4:12:0,12,104	0/0:11,0:11:29.99:0,30,260	0/0:7,0:7:21:0,21,182	0/0:4,0:4:9:0,9,78
chr10	51816500	.	T	TTA	985.79	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-0.816;DP=221;FS=1.242;HRun=0;HaplotypeScore=33.7240;InbreedingCoeff=0.8812;MQ=64.75;MQ0=2;MQRankSum=0.966;QD=22.93;ReadPosRankSum=2.045;VQSLOD=3.6529;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:35.54:0,36,165	1/1:0,0:7:15.47:67,15,0	0/0:5,0:4:9.02:0,9,92	0/0:1,0:1:3:0,3,27	0/0:9,0:9:24.08:0,24,329	0/0:7,0:7:20.96:0,21,267	0/0:7,0:7:18.06:0,18,233	0/0:18,0:18:51.10:0,51,647	0/0:4,0:4:12:0,12,142	0/0:18,0:18:48.11:0,48,644	0/0:8,0:8:21.03:0,21,271	1/1:0,6:6:9.03:158,9,0	1/1:0,9:9:18.06:316,18,0	0/0:7,0:7:21.07:0,21,294	1/1:0,0:3:8.52:42,9,0	1/1:0,0:6:15:66,15,0	0/0:9,0:9:22.09:0,22,76	0/0:9,0:9:20.81:0,21,94	0/0:15,0:13:39.04:0,39,490	0/0:11,0:11:33.11:0,33,459	0/0:8,0:8:18.06:0,18,233	1/1:0,6:6:18.04:265,18,0	1/1:0,4:4:9.03:159,9,0	1/1:0,2:2:6.02:106,6,0	0/0:5,0:5:15.01:0,15,184	0/0:12,0:12:33.08:0,33,455	0/0:7,0:7:21.07:0,21,285	0/0:3,0:3:9.03:0,9,121
chr10	51825028	.	T	TA	695.75	PASS	AB=0.971;AC=18;AF=0.321;AN=56;BaseQRankSum=7.587;DP=587;FS=2.445;HRun=13;HaplotypeScore=97.9211;InbreedingCoeff=0.2452;MQ=62.02;MQ0=26;MQRankSum=-7.180;QD=2.42;ReadPosRankSum=-0.223;VQSLOD=0.3032;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:70.34:0,70,463	1/1:6,2:8:10.68:75,11,0	0/1:51,0:11:7.14:7,0,41	0/0:41,0:13:7.01:0,7,43	0/1:24,5:29:23.74:24,0,287	0/0:21,1:22:1.05:0,1,137	0/0:3,0:3:5.93:0,6,40	0/1:23,0:22:16.54:17,0,99	0/0:11,0:11:13.15:0,13,81	0/0:24,0:23:42.65:0,43,317	0/0:23,0:23:10.73:0,11,211	1/1:16,2:17:5.58:116,6,0	0/1:11,0:11:8.69:51,0,9	0/0:11,0:10:17.62:0,18,120	0/1:28,1:29:4.38:141,0,4	1/1:12,0:12:11.44:59,11,0	0/1:21,0:21:2.56:8,0,3	0/1:14,0:14:0.08:0,0,21	0/0:17,0:16:21.49:0,21,131	0/0:32,0:33:52.03:0,52,361	0/0:10,0:10:14.76:0,15,98	1/1:14,1:14:23.65:178,24,0	0/1:23,0:23:3.88:85,0,4	0/1:14,1:15:5.83:68,0,6	0/0:20,0:20:18.29:0,18,137	0/0:31,0:31:28.32:0,28,275	0/1:18,1:19:35.02:35,0,81	0/0:20,0:19:7.79:0,8,128
chr10	51825036	.	AAAAAAC	A	1927.13	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=11.354;DP=622;FS=6.670;HRun=0;HaplotypeScore=122.4238;InbreedingCoeff=0.5708;MQ=59.35;MQ0=32;MQRankSum=-6.975;QD=6.93;ReadPosRankSum=6.531;VQSLOD=1.1611;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:77.54:0,78,937	1/1:3,6:9:17.14:177,17,0	0/1:62,0:13:8.20:8,0,53	0/1:50,0:14:15.35:15,0,55	0/0:29,0:29:83.16:0,83,1531	0/0:20,0:20:44.94:0,45,791	0/0:3,0:3:9.03:0,9,167	0/0:24,0:23:29.27:0,29,804	0/0:12,0:12:34.87:0,35,513	0/0:29,0:28:76.99:0,77,1161	0/0:25,0:25:63.33:0,63,1069	1/1:15,0:15:26.12:187,26,0	1/1:14,0:14:20.84:162,21,0	0/0:14,0:13:32.89:0,33,361	1/1:7,24:31:53.52:889,54,0	1/1:2,9:11:12.04:238,12,0	1/1:20,0:20:4.32:46,4,0	0/1:13,0:13:18.39:105,0,18	0/0:25,0:22:20.65:0,21,587	0/0:31,0:30:68.74:0,69,1452	0/0:10,0:10:5.26:0,5,486	1/1:16,0:15:24.21:166,24,0	0/1:20,0:20:14.75:71,0,15	0/1:16,0:16:8.67:57,0,9	0/0:23,0:22:41.89:0,42,761	0/0:29,0:28:77.44:0,77,1421	0/0:23,0:23:38.49:0,38,589	0/0:18,0:17:34.65:0,35,676
chr10	51825038	.	AAAAC	A	2263.23	PASS	AB=0.879;AC=20;AF=0.357;AN=56;BaseQRankSum=11.226;DP=625;FS=0.424;HRun=0;HaplotypeScore=102.8823;InbreedingCoeff=0.5960;MQ=58.98;MQ0=32;MQRankSum=-5.658;QD=8.03;ReadPosRankSum=4.036;VQSLOD=1.9659;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:61.09:0,61,539	1/1:9,0:9:17.14:139,17,0	0/1:64,0:13:17.30:17,0,24	0/1:51,0:13:16.84:17,0,60	0/0:29,0:29:71.23:0,71,1085	0/0:20,0:20:45:0,45,565	0/0:3,0:3:8.51:0,9,102	0/0:22,0:21:26.86:0,27,503	0/0:12,0:12:30.19:0,30,312	0/0:30,0:29:76.95:0,77,763	0/0:25,0:25:5:0,5,657	1/1:5,11:15:29.37:343,29,0	1/1:1,14:15:20.94:302,21,0	0/0:13,0:12:32.05:0,32,266	1/1:30,1:31:41.64:595,42,0	1/1:11,0:11:12.04:160,12,0	1/1:20,0:20:17.76:154,18,0	0/1:12,1:13:14.10:158,0,14	0/0:26,0:23:2.54:0,3,327	0/0:31,0:30:63.74:0,64,954	0/0:10,0:10:4.99:0,5,333	1/1:5,11:15:25.77:295,26,0	1/1:2,17:19:2.30:178,2,0	0/1:5,12:17:8.83:103,0,9	0/0:23,0:22:41.73:0,42,561	0/0:30,0:29:79.17:0,79,910	0/0:22,0:22:17.72:0,18,383	0/0:18,0:17:31.51:0,32,440
chr10	51825039	.	AAAC	A	1973.29	PASS	AB=0.928;AC=22;AF=0.393;AN=56;BaseQRankSum=10.358;DP=623;FS=2.380;HRun=0;HaplotypeScore=93.9359;InbreedingCoeff=0.4620;MQ=58.15;MQ0=32;MQRankSum=-5.252;QD=6.00;ReadPosRankSum=3.210;VQSLOD=2.3385;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:39.60:0,40,342	1/1:9,0:9:17.13:126,17,0	0/1:63,0:11:17.28:23,0,17	0/1:51,0:13:18.08:18,0,57	0/0:29,0:29:64.24:0,64,885	0/0:21,0:21:47.45:0,47,460	0/0:3,0:3:3.51:0,4,67	0/0:23,0:22:2.34:0,2,355	0/0:12,0:12:11.57:0,12,207	0/0:30,0:29:62.32:0,62,614	0/1:25,0:25:22.08:22,0,506	1/1:16,0:15:29.05:260,29,0	1/1:15,0:15:20.43:219,20,0	0/0:13,0:12:22.44:0,22,222	1/1:31,0:31:35.62:479,36,0	1/1:10,0:10:12.03:133,12,0	1/1:1,19:20:18.05:227,18,0	0/1:3,10:13:11.46:163,0,11	0/1:25,0:22:41.83:42,0,255	0/0:31,0:30:54.13:0,54,721	0/0:10,0:10:4.91:0,5,256	1/1:15,1:15:25.56:247,26,0	1/1:19,0:19:2.36:132,2,0	0/1:16,0:16:8.93:78,0,9	0/0:23,0:22:41.41:0,41,469	0/0:30,0:29:71.80:0,72,679	0/0:22,0:22:16.54:0,17,289	0/0:18,0:17:29.26:0,29,331
chr10	51825424	.	T	TAA	7019.52	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=13.662;DP=708;FS=4.877;HRun=2;HaplotypeScore=92.5970;InbreedingCoeff=0.9981;MQ=79.62;MQ0=1;MQRankSum=-4.829;QD=45.88;ReadPosRankSum=3.048;VQSLOD=4.7542;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,56:57:99:2803,151,0	1/1:0,9:9:18.02:300,18,0	0/0:28,0:28:69.23:0,69,1005	0/0:25,0:25:69.22:0,69,984	0/0:33,0:33:90.30:0,90,1320	0/0:30,0:30:87.29:0,87,1277	0/0:21,0:21:57.17:0,57,819	0/0:24,0:24:60.17:0,60,828	0/0:27,0:27:75.24:0,75,1083	0/0:30,0:30:87.28:0,87,1247	0/0:22,0:22:60.20:0,60,879	0/0:18,0:18:54.16:0,54,761	0/0:32,0:32:90.27:0,90,1284	0/0:20,0:20:57.19:0,57,837	1/1:4,26:30:84.25:1500,84,0	1/1:1,22:23:51.17:952,51,0	1/1:3,11:14:33.07:568,33,0	1/1:3,17:19:48.16:897,48,0	0/0:18,0:18:51.17:0,51,749	0/0:30,0:30:81.27:0,81,1188	0/0:27,0:27:78.26:0,78,1149	0/0:30,0:30:87.29:0,87,1279	0/0:26,0:26:72.22:0,72,1036	0/0:26,0:26:78.26:0,78,1149	0/0:22,0:22:66.21:0,66,952	0/0:38,0:38:99:0,111,1633	0/0:19,0:19:57.18:0,57,818	0/0:9,0:9:27.09:0,27,397
chr10	51825758	.	AACTCACTGTTCTTTATACCCAGG	A	6413.19	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=9.706;DP=527;FS=1.470;HRun=0;HaplotypeScore=302.9196;InbreedingCoeff=0.9677;MQ=87.68;MQ0=0;MQRankSum=-9.644;QD=101.80;ReadPosRankSum=3.243;VQSLOD=3.9996;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,6:11:9.03:529,9,0	1/1:5,7:12:12.04:756,12,0	0/0:20,0:20:60.19:0,60,3230	0/0:18,0:18:51.15:0,51,3338	0/0:29,0:29:87.30:0,87,8401	0/0:18,0:18:54.19:0,54,5519	0/0:8,0:8:18.06:0,18,1642	0/0:31,0:31:84.29:0,84,7150	0/0:13,0:13:39.13:0,39,3930	0/0:31,0:31:90.31:0,90,8972	0/0:24,0:24:72.25:0,72,7646	0/0:14,0:14:42.14:0,42,4000	0/0:19,0:19:57.20:0,57,5632	0/0:21,0:21:63.21:0,63,6126	1/1:3,15:18:36.12:2269,36,0	1/1:5,17:22:45.15:2859,45,0	0/0:12,0:12:36.12:0,36,3375	0/0:10,0:10:30.10:0,30,2792	0/0:10,0:10:30.10:0,30,2555	0/0:29,0:29:87.30:0,87,9054	0/0:17,0:17:45.15:0,45,4211	0/0:27,0:27:78.27:0,78,7173	0/0:16,0:16:48.16:0,48,4773	0/0:5,0:5:15.05:0,15,1607	0/0:23,0:23:69.24:0,69,6727	0/0:21,0:21:60.21:0,60,5638	0/0:31,0:31:93.27:0,93,8097	0/0:17,0:17:51.17:0,51,5021
chr10	51826749	.	T	TAAA	4256.71	PASS	AB=0.568;AC=20;AF=0.357;AN=56;BaseQRankSum=1.379;DP=561;FS=3.338;HRun=11;HaplotypeScore=92.3063;InbreedingCoeff=0.8406;MQ=76.47;MQ0=0;MQRankSum=-3.036;QD=20.46;ReadPosRankSum=0.368;VQSLOD=3.6077;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:8,0:31:34:75,0,34	1/1:2,9:12:27.48:415,27,0	0/0:26,0:23:25.95:0,26,309	0/0:25,0:16:19.25:0,19,192	0/0:16,0:16:45.11:0,45,513	0/0:15,0:15:45.13:0,45,524	0/0:13,0:13:33.06:0,33,363	0/0:32,0:32:64.53:0,65,687	0/0:17,0:18:42.02:0,42,473	0/0:25,0:27:62.98:0,63,685	0/0:23,0:24:57.01:0,57,648	1/1:5,5:13:18.02:271,18,0	1/1:2,13:16:36.07:608,36,0	0/0:21,0:21:51.06:0,51,596	1/1:2,19:23:51.10:888,51,0	1/1:5,11:18:33.09:587,33,0	0/1:6,0:27:15.64:16,0,63	1/1:1,0:13:16.55:59,17,0	0/0:21,0:23:26.16:0,26,476	0/0:20,0:21:53.93:0,54,580	0/0:10,0:10:27.04:0,27,304	1/1:9,6:18:23.97:313,24,0	1/1:4,12:20:33.09:574,33,0	1/1:3,14:17:24.06:451,24,0	0/0:13,0:14:28.58:0,29,337	0/0:21,0:21:44.93:0,45,497	0/0:32,0:34:75.05:0,75,842	0/0:10,0:12:22.49:0,22,249
chr10	51827175	.	GTC	G	750.45	PASS	AB=0.887;AC=19;AF=0.380;AN=50;BaseQRankSum=2.384;DP=516;FS=12.132;HRun=0;HaplotypeScore=69.4357;InbreedingCoeff=0.1950;MQ=76.16;MQ0=10;MQRankSum=0.115;QD=3.72;ReadPosRankSum=2.210;VQSLOD=0.8183;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:8,0:15:2.84:14,3,0	1/1:7,1:8:3.01:33,3,0	./.	./.	1/1:16,8:25:20.89:211,21,0	0/0:24,0:23:1.05:0,1,385	0/1:17,3:20:18.27:18,0,157	./.	0/1:7,1:12:20.20:27,0,20	0/0:26,0:26:15.01:0,15,182	0/1:21,0:22:5.32:5,0,255	0/0:10,0:11:11.62:0,12,119	0/0:16,0:19:0.89:0,1,85	0/1:10,3:14:32.44:68,0,32	1/1:4,8:12:21.06:230,21,0	1/1:4,4:8:3.01:33,3,0	0/0:13,0:13:8.99:0,9,74	0/0:17,0:24:8.98:0,9,83	1/1:10,4:15:11.86:113,12,0	0/0:19,0:19:18.53:0,19,270	0/1:25,2:26:96.17:96,0,246	0/0:6,0:9:6:0,6,51	0/0:11,0:17:11.99:0,12,102	0/0:12,0:26:18.93:0,19,322	0/0:14,0:13:15.02:0,15,180	0/1:13,2:15:39.65:40,0,110	0/0:24,0:23:5.84:0,6,360	0/1:6,1:7:23.80:24,0,81
chr10	51828364	.	TA	T	988.17	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=6.488;DP=516;FS=5.886;HRun=2;HaplotypeScore=52.3964;InbreedingCoeff=0.9810;MQ=75.68;MQ0=0;MQRankSum=-0.851;QD=28.23;ReadPosRankSum=2.230;VQSLOD=2.9535;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,138,2045	1/1:0,8:8:18.06:234,18,0	0/0:13,0:13:23.75:0,24,392	0/0:8,0:8:14.40:0,14,169	0/0:20,0:20:54.18:0,54,808	0/0:19,0:19:54.18:0,54,805	0/0:26,0:26:75.25:0,75,1121	0/0:25,0:25:72.22:0,72,1025	0/0:12,0:12:36.12:0,36,539	0/0:22,0:22:60.20:0,60,881	0/0:18,0:18:54.18:0,54,808	0/0:16,0:16:48.16:0,48,710	0/0:27,0:27:81.27:0,81,1201	0/0:18,0:18:54.18:0,54,806	1/1:0,16:16:42.14:545,42,0	1/1:0,11:11:27.09:351,27,0	0/0:24,0:24:72.22:0,72,1055	0/0:5,0:5:15.05:0,15,225	0/0:22,0:22:63.19:0,63,906	0/0:20,0:20:60.20:0,60,898	0/0:22,0:22:66.22:0,66,986	0/0:15,0:15:45.02:0,45,580	0/0:15,0:15:45.13:0,45,634	0/0:24,0:24:72.24:0,72,1077	0/0:21,0:21:63.19:0,63,907	0/0:18,0:18:54.17:0,54,789	0/0:18,0:17:54.18:0,54,809	0/0:6,0:6:18.06:0,18,268
chr10	51828603	.	TAC	T	485.51	PASS	AB=0.943;AC=17;AF=0.340;AN=50;BaseQRankSum=3.493;DP=469;FS=2.997;HRun=0;HaplotypeScore=85.0417;InbreedingCoeff=0.2485;MQ=59.71;MQ0=13;MQRankSum=-2.041;QD=2.49;ReadPosRankSum=3.226;VQSLOD=1.0877;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:31:32.71:0,33,335	1/1:7,0:10:5.68:28,6,0	./.	./.	0/0:11,1:11:6:0,6,68	0/1:22,0:22:8.60:9,0,120	0/1:10,2:12:16.55:17,0,147	./.	0/1:16,0:15:16.59:17,0,154	0/0:15,0:15:9.49:0,9,107	0/1:17,1:18:17.34:17,0,86	0/0:5,0:8:2.85:0,3,26	0/0:17,0:17:9.01:0,9,89	0/0:12,0:12:15.01:0,15,195	1/1:10,0:14:11.36:56,11,0	1/1:7,0:15:19.89:98,20,0	1/1:15,4:20:8.86:78,9,0	1/1:9,9:18:23.89:238,24,0	0/1:20,0:21:20.05:20,0,97	0/1:11,0:11:19.77:20,0,119	0/0:14,1:14:14.73:0,15,183	0/0:14,0:14:13.99:0,14,110	0/0:23,0:23:17.99:0,18,154	0/0:25,0:24:15.01:0,15,146	0/0:14,0:14:3.01:0,3,43	0/0:13,0:13:9.02:0,9,113	0/1:13,3:16:35.02:55,0,35	0/0:7,0:7:12.02:0,12,154
chr10	51830241	.	A	ATGTGTG	2220.86	PASS	AB=0.756;AC=20;AF=0.357;AN=56;BaseQRankSum=5.544;DP=657;FS=0.583;HRun=0;HaplotypeScore=148.9253;InbreedingCoeff=0.4524;MQ=53.78;MQ0=17;MQRankSum=-2.974;QD=7.10;ReadPosRankSum=3.253;VQSLOD=2.6730;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:12,0:37:28.76:29,0,104	1/1:2,0:7:9.03:116,9,0	0/1:25,0:13:20.64:21,0,347	0/1:33,0:17:40.03:40,0,170	0/0:21,0:21:39.11:0,39,762	0/0:25,0:25:58.04:0,58,1118	0/0:24,0:25:45.13:0,45,855	0/0:29,0:26:33.06:0,33,600	0/0:20,0:20:51.17:0,51,995	0/0:24,0:26:57.19:0,57,1112	0/0:21,0:21:33.09:0,33,634	1/1:8,10:20:21.07:683,21,0	1/1:3,7:13:15.05:432,15,0	0/0:23,0:23:48.16:0,48,999	0/1:16,1:33:24.41:417,0,24	0/1:9,0:24:36.45:281,0,36	1/1:13,0:22:0.52:149,1,0	1/1:8,2:13:6.44:98,6,0	0/0:16,0:16:18.95:0,19,330	0/0:23,0:23:60.19:0,60,1122	0/0:38,0:34:22.99:0,23,1182	1/1:14,15:28:4.26:99,4,0	0/1:11,10:22:0:0,0,0	1/1:15,16:33:2.57:33,3,0	0/0:17,0:17:30.10:0,30,616	0/0:27,0:28:67.10:0,67,1333	0/0:20,0:20:45.12:0,45,846	0/0:8,0:8:21.07:0,21,417
chr10	51832972	.	AGTGT	A	276.89	PASS	AB=0.939;AC=13;AF=0.250;AN=52;BaseQRankSum=3.149;DP=550;FS=0.000;HRun=0;HaplotypeScore=97.1070;InbreedingCoeff=0.2276;MQ=67.57;MQ0=13;MQRankSum=-0.548;QD=1.82;ReadPosRankSum=0.665;VQSLOD=1.1682;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:32:25.31:0,25,377	0/0:7,0:7:2.98:0,3,21	./.	./.	0/0:14,0:14:12:0,12,210	0/0:19,0:19:23.80:0,24,401	0/0:18,0:18:20.72:0,21,257	0/0:18,0:18:1.25:0,1,3	0/0:19,0:19:10.98:0,11,142	0/0:14,0:13:5.57:0,6,91	0/1:14,1:15:25.56:26,0,214	1/1:9,11:21:12.42:143,12,0	0/1:10,0:9:14.52:20,0,15	0/0:13,0:13:0.93:0,1,17	0/0:19,0:19:20.98:0,21,230	0/0:22,0:22:12.16:0,12,106	1/1:26,0:26:3:28,3,0	1/1:16,0:15:2.74:28,3,0	0/0:17,0:17:2.90:0,3,16	0/0:21,0:21:17.69:0,18,238	0/0:38,0:39:15.92:0,16,240	0/1:14,0:14:6.03:6,0,30	0/0:14,4:17:0.22:0,0,17	1/1:15,7:22:1.70:128,2,0	0/1:9,0:10:3.77:4,0,407	0/0:16,0:15:14.89:0,15,155	0/0:21,0:20:29.94:0,30,461	0/1:15,1:17:32.94:33,0,213
chr10	51833000	.	TGTGTGTGTGTGTGTGTGTGTGTGC	T	512.41	PASS	AB=0.559;AC=2;AF=0.036;AN=56;BaseQRankSum=3.361;DP=544;FS=1.503;HRun=0;HaplotypeScore=242.9939;InbreedingCoeff=0.2883;MQ=49.73;MQ0=22;MQRankSum=-3.583;QD=10.90;ReadPosRankSum=1.240;VQSLOD=2.7228;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:33:65.88:0,66,3347	0/0:3,0:3:3.01:0,3,152	0/0:4,0:1:0:0,0,0	0/0:13,0:5:3.01:0,3,39	0/0:21,0:21:38.96:0,39,1535	0/0:21,0:20:39.09:0,39,2475	0/0:16,0:16:8.14:0,8,1408	0/0:20,0:19:42.05:0,42,595	0/0:24,0:23:42.46:0,42,1377	0/0:18,0:17:42.10:0,42,1785	0/0:13,0:12:24.07:0,24,1808	0/0:24,0:23:36.03:0,36,1659	0/0:14,0:13:31.26:0,31,1249	0/0:8,0:8:14.76:0,15,444	0/0:18,0:18:37.35:0,37,2218	0/0:24,0:21:36.11:0,36,1857	0/1:6,19:23:48.56:313,0,49	0/1:4,18:21:1.67:287,0,2	0/0:12,0:11:23.77:0,24,255	0/0:20,0:20:42.09:0,42,1750	0/0:45,0:42:64.77:0,65,2486	0/0:16,0:16:36.08:0,36,1340	0/0:20,0:19:24.02:0,24,713	0/0:28,0:28:51.09:0,51,1766	0/0:17,0:17:48.16:0,48,3078	0/0:22,0:20:57.86:0,58,2079	0/0:26,0:25:60.10:0,60,3493	0/0:16,0:16:35.30:0,35,2150
chr10	51834156	.	G	GA	6394.42	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-14.128;DP=678;FS=0.335;HRun=2;HaplotypeScore=68.5366;InbreedingCoeff=0.9894;MQ=85.29;MQ0=0;MQRankSum=-2.225;QD=38.75;ReadPosRankSum=3.069;VQSLOD=5.3815;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,24:25:72.24:1036,72,0	0/0:11,0:11:33.10:0,33,409	0/0:31,0:31:54.27:0,54,841	0/0:25,0:25:56.84:0,57,664	0/0:31,0:31:93.28:0,93,1140	0/0:23,0:23:66.14:0,66,764	0/0:20,0:20:57.16:0,57,692	0/0:24,0:24:57.15:0,57,674	0/0:26,0:26:78.22:0,78,941	0/0:43,0:42:99:0,117,1418	0/0:15,0:15:45.12:0,45,533	1/1:2,18:20:13.98:654,14,0	1/1:1,40:41:99:1598,111,0	0/0:21,0:21:54.17:0,54,669	0/0:30,0:30:84.26:0,84,1041	0/0:29,0:29:84.24:0,84,1016	0/0:24,1:25:26.09:0,26,774	0/0:17,0:17:42.11:0,42,504	0/0:21,0:21:57.17:0,57,695	0/0:23,0:23:63.19:0,63,770	0/0:20,0:20:51.10:0,51,600	1/1:0,31:31:90.22:1249,90,0	1/1:1,27:28:72.24:1037,72,0	1/1:0,20:20:57.19:821,57,0	0/0:24,0:24:72.23:0,72,892	0/0:21,0:21:60.18:0,60,732	0/0:29,0:29:75.18:0,75,881	0/0:4,0:4:12.04:0,12,149
chr10	51834746	.	T	TAA	123.78	PASS	AC=8;AF=0.182;AN=44;BaseQRankSum=0.924;DP=283;FS=6.184;HRun=0;HaplotypeScore=53.8937;InbreedingCoeff=0.6884;MQ=85.32;MQ0=15;MQRankSum=-0.932;QD=13.75;ReadPosRankSum=-3.179;VQSLOD=1.9702;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	1/1:3,0:3:2.93:52,3,0	0/0:45,0:16:43.75:0,44,543	0/0:28,0:20:23.77:0,24,355	0/0:10,0:9:16.38:0,16,208	0/0:13,0:12:12.93:0,13,177	0/0:13,0:13:28.97:0,29,364	0/0:28,0:27:57.39:0,57,848	0/0:8,0:7:18.06:0,18,283	0/0:15,0:15:38.93:0,39,568	0/0:7,0:6:8.66:0,9,83	./.	1/1:2,0:2:6.02:77,6,0	0/0:8,0:8:24.07:0,24,335	./.	1/1:2,0:2:6.02:75,6,0	./.	0/0:7,0:5:3.01:0,3,41	0/0:18,0:18:44.90:0,45,616	0/0:6,0:6:7.29:0,7,66	0/0:12,0:11:24.55:0,25,342	1/1:2,0:2:3.01:39,3,0	./.	./.	0/0:9,0:7:6.48:0,6,76	0/0:16,0:16:27:0,27,352	0/0:10,0:10:14.77:0,15,172	0/0:10,0:8:18.05:0,18,253
chr10	51841860	.	AGTGTGTGTGTGTGTGTGT	A	4613.82	PASS	AB=0.800;AC=11;AF=0.196;AN=56;BaseQRankSum=7.031;DP=575;FS=10.968;HRun=0;HaplotypeScore=269.5912;InbreedingCoeff=0.8140;MQ=64.28;MQ0=7;MQRankSum=-7.654;QD=37.82;ReadPosRankSum=1.143;VQSLOD=2.5673;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:18,0:23:98.32:274,0,98	0/0:4,0:8:6.02:0,6,70	0/0:21,0:15:12.04:0,12,259	0/0:26,0:15:6.02:0,6,193	0/0:24,0:23:39.13:0,39,2755	0/0:27,0:31:69.24:0,69,5153	0/0:9,0:13:23.84:0,24,1705	0/0:24,0:24:30.10:0,30,1457	0/0:15,0:15:33.11:0,33,2172	0/0:22,0:22:45.15:0,45,2841	0/0:18,0:18:30.10:0,30,2039	1/1:5,6:12:15.05:712,15,0	1/1:9,11:22:30.10:1383,30,0	0/0:12,0:12:24.08:0,24,1926	0/0:12,0:22:23.59:0,24,464	0/0:6,0:20:45.14:0,45,604	0/0:12,0:25:42.14:0,42,2218	0/0:4,0:14:30.10:0,30,1407	0/0:15,0:16:30.10:0,30,1918	0/0:11,0:14:32.10:0,32,2102	0/0:22,0:20:32.77:0,33,2211	1/1:9,14:24:27.09:1298,27,0	1/1:12,7:19:9.50:441,9,0	1/1:14,7:21:12.04:507,12,0	0/0:19,0:34:39.06:0,39,2785	0/0:29,0:30:63.21:0,63,3720	0/0:19,0:23:54.19:0,54,4008	0/0:15,0:16:21.54:0,22,1246
chr10	51842484	.	AAGG	A	3637.23	PASS	AB=0.826;AC=11;AF=0.196;AN=56;BaseQRankSum=7.005;DP=622;FS=8.792;HRun=0;HaplotypeScore=122.3359;InbreedingCoeff=0.8828;MQ=61.29;MQ0=5;MQRankSum=-0.959;QD=29.33;ReadPosRankSum=1.210;VQSLOD=3.8108;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,5:20:48.12:670,48,0	0/0:13,0:13:24.08:0,24,463	0/0:28,0:15:21.07:0,21,424	0/0:28,0:15:16.68:0,17,344	0/0:23,0:22:54.19:0,54,1083	0/0:30,0:30:84.27:0,84,1638	0/0:20,0:20:48.06:0,48,858	0/0:26,0:25:48.13:0,48,898	0/0:28,0:28:72.23:0,72,1407	0/0:32,0:32:69.23:0,69,1367	0/0:21,0:21:54.15:0,54,981	1/1:1,11:12:9.03:133,9,0	1/1:18,5:23:55.94:715,56,0	0/0:29,0:29:69.24:0,69,1413	0/0:30,0:30:79.73:0,80,1338	0/0:19,0:19:42.10:0,42,763	0/0:24,0:24:58.54:0,59,1001	0/0:20,0:18:45.05:0,45,831	0/0:17,0:16:33.10:0,33,601	0/0:18,0:18:39.12:0,39,740	0/0:20,0:20:35.95:0,36,682	1/1:18,6:24:63.02:820,63,0	1/1:21,5:26:60.01:760,60,0	0/1:15,4:19:9.22:539,0,9	0/0:25,0:25:56.68:0,57,1100	0/0:16,0:16:42.14:0,42,799	0/0:17,0:17:42.14:0,42,824	0/0:14,0:14:39.13:0,39,775
chr10	51842498	.	G	GA	2529.30	PASS	AB=0.833;AC=13;AF=0.232;AN=56;BaseQRankSum=12.696;DP=633;FS=7.775;HRun=1;HaplotypeScore=116.2835;InbreedingCoeff=0.6128;MQ=54.99;MQ0=11;MQRankSum=-2.113;QD=13.82;ReadPosRankSum=0.392;VQSLOD=2.5443;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,9:19:21.53:389,22,0	0/0:11,0:11:24.07:0,24,324	0/0:39,0:13:29.92:0,30,362	0/0:39,0:13:10.50:0,11,350	0/0:22,0:21:60.20:0,60,839	0/0:30,0:30:90.30:0,90,1252	0/0:25,0:25:75.24:0,75,1014	0/0:28,0:25:63.58:0,64,831	0/0:29,0:29:84.27:0,84,1149	0/0:26,0:26:75.25:0,75,1042	0/0:21,0:21:63.20:0,63,856	1/1:14,0:14:3.27:45,3,0	0/1:12,13:25:76.48:480,0,76	0/0:26,0:26:78.22:0,78,1067	0/1:26,0:30:33.20:33,0,859	0/0:15,0:15:22.84:0,23,505	0/1:23,1:24:40.32:40,0,620	0/0:18,0:16:29.92:0,30,542	0/0:16,0:15:45.08:0,45,582	0/0:17,0:17:51.16:0,51,691	0/0:18,0:18:39.13:0,39,543	1/1:10,15:25:72.66:698,73,0	1/1:11,16:27:30.96:608,31,0	1/1:7,11:19:3.16:408,3,0	0/0:20,0:20:59.69:0,60,804	0/0:18,0:18:54.18:0,54,751	0/0:15,0:15:45.15:0,45,624	0/0:17,0:17:48.16:0,48,667
chr10	51842499	.	G	GAA	3137.24	PASS	AB=0.951;AC=16;AF=0.286;AN=56;BaseQRankSum=15.203;DP=669;FS=6.688;HRun=1;HaplotypeScore=144.1344;InbreedingCoeff=0.4744;MQ=53.42;MQ0=11;MQRankSum=-6.930;QD=11.71;ReadPosRankSum=-2.801;VQSLOD=-0.6654;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:22:30.63:331,31,0	0/1:14,0:14:63.94:64,0,292	0/0:39,0:13:30.06:0,30,425	0/0:37,0:11:26.57:0,27,346	0/0:23,0:22:60.20:0,60,914	0/0:30,0:30:87.28:0,87,1302	0/0:25,0:25:75.19:0,75,1011	0/0:27,0:24:67.29:0,67,890	0/0:29,0:29:81.27:0,81,1228	0/0:25,0:25:72.23:0,72,1064	0/0:20,0:20:57.19:0,57,865	1/1:18,0:18:26.44:267,26,0	0/1:28,0:28:99:382,0,104	0/0:26,0:26:78.25:0,78,1161	0/1:27,1:32:99:175,0,752	0/1:22,0:22:99:253,0,369	0/1:22,3:24:99:202,0,548	0/1:17,1:16:29.22:29,0,515	0/0:17,0:16:40.38:0,40,581	0/0:17,0:17:48.15:0,48,708	0/0:12,0:17:39.12:0,39,575	1/1:31,0:31:69.47:628,69,0	1/1:30,1:31:33.85:613,34,0	1/1:26,1:27:36.93:383,37,0	0/0:20,0:20:57.19:0,57,871	0/0:18,0:18:51.16:0,51,760	0/0:15,0:15:45.12:0,45,632	0/0:16,0:16:48.14:0,48,690
chr10	51842580	.	G	GGAAA	5730.79	PASS	AB=0.981;AC=32;AF=0.615;AN=52;BaseQRankSum=1.593;DP=621;FS=12.313;HRun=0;HaplotypeScore=145.7744;InbreedingCoeff=0.7541;MQ=51.25;MQ0=15;MQRankSum=0.251;QD=14.44;ReadPosRankSum=-2.616;VQSLOD=3.6121;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:24:7.74:94,8,0	1/1:11,0:11:15.02:164,15,0	./.	./.	1/1:11,14:26:2.36:872,2,0	0/0:19,0:21:36.11:0,36,514	0/1:15,0:17:18.69:19,0,157	1/1:24,0:19:3.74:9,4,0	1/1:21,0:20:23.84:216,24,0	0/0:26,0:25:27.08:0,27,381	0/0:17,0:18:26.56:0,27,369	1/1:28,0:27:21.92:294,22,0	1/1:32,0:32:18.06:332,18,0	0/0:12,0:12:18.02:0,18,249	1/1:22,0:21:20.98:212,21,0	1/1:33,0:33:18.06:291,18,0	0/0:36,0:32:32.69:0,33,456	0/0:22,0:20:20.17:0,20,477	1/1:8,4:10:12.04:241,12,0	1/1:13,11:23:30.06:585,30,0	1/1:6,2:8:9.03:209,9,0	1/1:31,0:31:33.11:590,33,0	0/1:25,0:26:18.74:341,0,19	1/1:34,0:37:51:842,51,0	0/0:12,0:16:15.02:0,15,156	0/0:31,0:31:57.16:0,57,808	1/1:6,13:20:18.06:419,18,0	0/0:20,0:21:30.07:0,30,417
chr10	51842616	.	A	AGAAAGAAG	5428.75	PASS	AB=0.880;AC=21;AF=0.375;AN=56;BaseQRankSum=6.767;DP=631;FS=17.837;HRun=0;HaplotypeScore=168.3467;InbreedingCoeff=0.1837;MQ=57.39;MQ0=11;MQRankSum=-0.777;QD=15.87;ReadPosRankSum=5.890;VQSLOD=2.6408;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:3,20:27:13.53:359,0,14	1/1:8,0:8:18.05:473,18,0	0/0:13,0:8:14.38:0,14,156	0/1:7,0:6:2.89:3,0,55	0/1:32,0:31:99:100,0,382	0/0:21,0:21:60.12:0,60,1134	0/0:25,0:25:70.84:0,71,780	0/0:24,0:20:53.56:0,54,439	0/1:21,0:20:99:452,0,182	0/0:34,0:33:81.15:0,81,1202	0/0:16,0:16:42.56:0,43,806	1/1:22,0:22:32.98:688,33,0	1/1:1,0:31:17.98:202,18,0	0/0:19,0:19:51.06:0,51,731	1/1:17,0:16:41.91:861,42,0	0/1:2,27:30:6.92:745,0,7	0/0:31,0:31:79.09:0,79,1173	0/0:27,0:26:63.75:0,64,1125	0/1:18,0:13:27.05:27,0,185	0/1:21,0:20:29.58:30,0,129	0/1:10,0:10:16.29:16,0,103	1/1:14,0:16:7.04:439,7,0	0/1:14,0:18:65.26:313,0,65	0/1:30,0:38:21.93:679,0,22	0/0:15,0:15:36.06:0,36,484	0/0:30,0:30:76.10:0,76,1682	0/1:24,0:24:40.49:40,0,147	0/0:34,0:33:93.08:0,93,1280
chr10	51842668	.	C	CTCTG	3899.97	PASS	AB=0.923;AC=5;AF=0.089;AN=56;BaseQRankSum=-2.451;DP=578;FS=1.846;HRun=0;HaplotypeScore=97.4943;InbreedingCoeff=0.8088;MQ=77.33;MQ0=0;MQRankSum=-3.205;QD=54.93;ReadPosRankSum=1.486;VQSLOD=4.9907;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:36.12:0,36,672	0/0:9,0:9:27.09:0,27,504	0/1:11,0:12:6.97:7,0,400	0/0:15,0:15:41.90:0,42,705	0/0:24,0:24:63.22:0,63,1173	0/0:20,0:20:60.21:0,60,1120	0/0:17,0:17:36.12:0,36,672	0/0:20,0:20:51.17:0,51,933	0/0:25,0:25:72.25:0,72,1343	0/0:27,0:27:81.28:0,81,1512	0/0:9,0:9:21.07:0,21,392	0/0:23,0:23:60.21:0,60,1116	0/0:29,0:29:39.13:0,39,728	0/0:24,0:24:72.25:0,72,1333	0/0:16,0:16:42.14:0,42,783	0/0:25,0:25:48.14:0,48,851	1/1:7,24:33:75.26:1974,75,0	1/1:1,24:26:72.25:1919,72,0	0/0:17,0:17:51.16:0,51,917	0/0:13,0:13:39.13:0,39,728	0/0:17,0:17:48.16:0,48,895	0/0:13,0:13:27.09:0,27,504	0/0:10,0:10:30.10:0,30,560	0/0:37,0:37:99:0,102,1901	0/0:14,0:14:42.14:0,42,783	0/0:21,0:21:57.20:0,57,1063	0/0:24,0:24:54.19:0,54,1008	0/0:35,0:35:99:0,99,1814
chr10	51843028	.	AAT	A	375.42	PASS	AB=0.913;AC=10;AF=0.250;AN=40;BaseQRankSum=4.295;DP=218;FS=0.989;HRun=0;HaplotypeScore=30.6011;InbreedingCoeff=0.0421;MQ=79.56;MQ0=0;MQRankSum=-0.637;QD=3.95;ReadPosRankSum=-0.046;VQSLOD=1.1453;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:11,0:8:2.90:0,3,16	0/0:16,0:8:0.47:0,0,1	0/1:6,2:8:58.65:59,0,78	0/0:8,0:8:9.03:0,9,142	0/0:7,0:7:6.02:0,6,95	0/1:23,2:26:4.40:4,0,502	0/0:7,0:7:12.04:0,12,189	0/0:4,0:4:6.02:0,6,95	0/0:9,0:9:18.06:0,18,284	./.	./.	0/1:11,1:12:23.30:23,0,130	./.	0/0:5,0:5:3:0,3,28	0/0:9,0:9:5.98:0,6,60	0/0:4,0:4:3.01:0,3,39	0/1:11,1:12:17.29:17,0,216	0/0:5,0:5:9.03:0,9,142	1/1:2,4:6:12.04:141,12,0	./.	./.	./.	1/1:4,3:10:20.56:183,21,0	0/0:14,0:14:1.70:0,2,339	0/1:7,0:7:58.38:58,0,83	0/1:13,1:14:14.28:14,0,263
chr10	51843695	.	TTGTGTGTG	T	2708.99	PASS	AB=0.815;AC=16;AF=0.296;AN=54;BaseQRankSum=7.056;DP=617;FS=9.583;HRun=0;HaplotypeScore=153.0205;InbreedingCoeff=0.7599;MQ=65.31;MQ0=15;MQRankSum=-8.654;QD=15.48;ReadPosRankSum=1.293;VQSLOD=2.4880;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:38:17.36:0,17,637	1/1:5,4:9:9.03:187,9,0	./.	0/0:27,0:22:3.01:0,3,66	0/1:25,0:25:19.73:20,0,905	0/0:24,0:25:30.08:0,30,884	0/0:18,0:19:27.07:0,27,803	0/0:24,0:23:16.29:0,16,477	0/0:20,0:22:30.10:0,30,1072	0/0:17,0:17:15.05:0,15,488	0/0:23,0:23:30.10:0,30,1067	0/1:6,5:11:1.92:332,0,2	1/1:16,8:24:18.06:432,18,0	0/0:13,0:13:30.10:0,30,1065	1/1:8,13:19:27.09:677,27,0	1/1:11,10:20:15.05:376,15,0	0/0:25,0:32:12.38:0,12,345	0/0:9,0:15:18.02:0,18,440	0/0:16,0:17:13.83:0,14,255	0/0:22,0:22:21.06:0,21,601	0/0:48,0:49:72.20:0,72,2234	1/1:12,9:21:20.98:459,21,0	1/1:7,6:13:12.04:263,12,0	1/1:19,8:26:6.02:150,6,0	0/0:11,0:16:18.53:0,19,614	0/0:18,0:18:30.10:0,30,990	0/0:19,0:20:33.11:0,33,1128	0/0:6,0:6:5.96:0,6,43
chr10	51843965	.	G	GA	4056.23	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-11.205;DP=639;FS=3.890;HRun=8;HaplotypeScore=69.2904;InbreedingCoeff=0.9991;MQ=85.58;MQ0=0;MQRankSum=-1.030;QD=27.22;ReadPosRankSum=2.518;VQSLOD=4.4393;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,36:38:87.26:1004,87,0	0/0:10,0:10:27.01:0,27,247	0/0:23,0:23:47.63:0,48,404	0/0:32,0:31:68.95:0,69,626	0/0:27,0:27:77.97:0,78,697	0/0:18,0:18:48:0,48,433	0/0:16,0:16:44.99:0,45,402	0/0:32,0:32:71.99:0,72,651	0/0:23,0:23:63.03:0,63,577	0/0:26,0:26:68.85:0,69,613	0/0:21,0:21:48.02:0,48,439	1/1:0,26:26:72.21:831,72,0	1/1:4,19:23:48.14:554,48,0	0/0:14,0:14:33.01:0,33,302	0/0:24,0:24:57.02:0,57,522	0/0:16,0:16:41.99:0,42,372	0/0:1,0:36:59.07:0,59,174	0/0:0,0:18:34.63:0,35,102	0/0:24,0:24:26.26:0,26,473	0/0:26,0:26:45.04:0,45,581	0/0:24,0:24:56.99:0,57,510	1/1:4,19:23:54.16:623,54,0	1/1:2,19:21:29.70:595,30,0	1/1:2,16:18:39.12:449,39,0	0/0:16,0:16:42:0,42,381	0/0:30,0:30:81.03:0,81,741	0/0:24,0:23:66:0,66,597	0/0:10,0:10:27.01:0,27,247
chr10	51846240	.	AGAC	A	3405.56	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.837;DP=794;FS=3.440;HRun=0;HaplotypeScore=115.3364;InbreedingCoeff=0.9995;MQ=77.91;MQ0=0;MQRankSum=-0.904;QD=46.65;ReadPosRankSum=1.327;VQSLOD=5.7230;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:96.28:0,96,2088	1/1:1,10:11:30.10:499,30,0	0/0:35,0:35:96.32:0,96,2017	0/0:21,0:21:53.23:0,53,1138	0/0:27,0:27:78.27:0,78,1760	0/0:28,0:28:81.28:0,81,1831	0/0:32,0:32:93.32:0,93,2054	0/0:31,0:31:87.30:0,87,1967	0/0:42,0:42:99:0,126,2826	0/0:28,0:28:78.20:0,78,1637	0/0:19,0:19:57.18:0,57,1210	0/0:37,0:37:99:0,108,2397	0/0:31,0:31:90.31:0,90,2031	0/0:33,0:33:99:0,99,2235	1/1:0,38:38:99:1788,111,0	1/1:1,23:24:69.19:1118,69,0	0/0:29,0:29:78.27:0,78,1745	0/0:27,0:27:78.27:0,78,1749	0/0:29,0:29:81.27:0,81,1719	0/0:33,0:33:99:0,99,2195	0/0:30,0:30:87.30:0,87,1950	0/0:35,0:35:99:0,105,2192	0/0:29,0:29:87.30:0,87,1969	0/0:21,0:21:63.22:0,63,1395	0/0:34,0:34:96.33:0,96,2150	0/0:18,0:18:54.19:0,54,1218	0/0:24,0:24:69.24:0,69,1517	0/0:14,0:14:27.09:0,27,612
chr10	51847021	.	A	AT	2866.67	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-12.351;DP=526;FS=0.000;HRun=9;HaplotypeScore=52.2380;InbreedingCoeff=0.9871;MQ=71.91;MQ0=0;MQRankSum=-1.416;QD=23.89;ReadPosRankSum=0.094;VQSLOD=4.1663;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:56.96:0,57,490	1/1:0,5:5:12.03:133,12,0	0/0:16,0:14:32.85:0,33,267	0/0:6,0:7:12.34:0,12,93	0/0:29,0:29:74.94:0,75,647	0/0:27,0:27:71.98:0,72,625	0/0:17,0:17:44.98:0,45,391	0/0:31,0:31:65.95:0,66,573	0/0:15,0:15:44.97:0,45,387	0/0:28,0:28:74.97:0,75,651	0/0:27,0:28:76.98:0,77,647	1/1:3,11:14:33.05:352,33,0	1/1:2,17:19:48.13:531,48,0	0/0:8,0:8:17.99:0,18,156	1/1:6,15:21:39.11:431,39,0	1/1:1,9:10:21.06:233,21,0	0/0:3,0:27:46.85:0,47,138	0/0:3,0:23:34.63:0,35,102	0/0:25,0:25:59.97:0,60,521	0/0:21,0:21:56.95:0,57,488	0/0:7,0:7:21:0,21,182	1/1:1,12:13:33.09:365,33,0	1/1:4,20:24:54.15:597,54,0	1/1:0,14:14:39.11:431,39,0	0/0:15,0:15:35.95:0,36,308	0/0:29,0:29:83.98:0,84,729	0/0:17,0:17:41.96:0,42,358	0/0:16,0:16:47.99:0,48,417
chr10	51847535	.	CACG	C	1460.98	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.520;DP=676;FS=0.000;HRun=0;HaplotypeScore=96.2784;InbreedingCoeff=0.9967;MQ=87.88;MQ0=0;MQRankSum=-5.198;QD=35.63;ReadPosRankSum=1.005;VQSLOD=4.2388;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,38:41:99:1556,99,0	0/0:12,0:12:30.10:0,30,669	0/0:19,0:19:48.13:0,48,996	0/0:28,0:28:66.18:0,66,1247	0/0:18,0:18:51.17:0,51,1115	0/0:21,0:21:60.21:0,60,1338	0/0:26,0:26:69.24:0,69,1517	0/0:21,0:21:54.19:0,54,1183	0/0:17,0:17:51.18:0,51,1126	0/0:32,0:32:84.29:0,84,1875	0/0:15,0:15:36.11:0,36,763	0/0:29,0:29:84.29:0,84,1823	0/0:29,0:29:69.24:0,69,1510	0/0:31,0:31:90.31:0,90,2009	0/0:32,0:32:90.31:0,90,1950	0/0:23,0:23:69.24:0,69,1539	0/0:48,0:48:99:0,130,2876	0/0:26,0:26:72.25:0,72,1608	0/0:18,0:18:42.13:0,42,914	0/0:28,0:28:72.22:0,72,1548	0/0:34,0:34:99:0,99,2117	0/0:26,0:26:75.25:0,75,1646	0/0:14,0:14:39.12:0,39,803	0/0:30,0:30:84.29:0,84,1850	0/0:10,0:10:30.10:0,30,657	0/0:19,0:19:48.16:0,48,1071	0/0:21,0:21:63.22:0,63,1405	0/0:8,0:8:24.05:0,24,443
chr10	51849165	.	GGGGA	G	897.51	PASS	AB=0.947;AC=8;AF=0.143;AN=56;BaseQRankSum=8.336;DP=462;FS=0.678;HRun=0;HaplotypeScore=91.0307;InbreedingCoeff=-0.1667;MQ=65.92;MQ0=2;MQRankSum=-7.555;QD=5.75;ReadPosRankSum=-1.047;VQSLOD=1.9561;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:13:36.12:0,36,899	0/1:7,0:7:32.68:33,0,231	0/0:14,0:9:16.32:0,16,395	0/0:15,0:9:17.74:0,18,386	0/0:12,0:12:33.11:0,33,890	0/0:12,0:12:33.11:0,33,890	0/0:21,0:21:57.20:0,57,1526	0/0:19,0:18:36.12:0,36,889	0/0:11,0:10:30.10:0,30,809	0/0:13,0:13:39.13:0,39,1030	0/0:8,0:8:18.06:0,18,454	0/1:20,9:29:99:433,0,1298	0/1:16,2:18:62.64:63,0,1034	0/0:19,0:19:57.18:0,57,1476	0/1:11,0:11:11.60:12,0,777	0/1:13,0:13:99:270,0,445	0/1:26,0:26:12.80:13,0,1467	0/1:21,0:20:98.51:99,0,920	0/0:11,0:10:27.08:0,27,629	0/0:10,0:10:24.08:0,24,585	0/0:61,0:55:99:0,156,3987	0/0:17,0:17:39.13:0,39,1048	0/0:6,0:6:18.06:0,18,462	0/1:28,3:31:99:111,0,1331	0/0:15,0:15:33.09:0,33,811	0/0:15,0:15:42.04:0,42,1069	0/0:7,0:7:21.07:0,21,566	0/0:5,0:5:15.05:0,15,405
chr10	51850089	.	C	CA	3811.43	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-1.048;DP=547;FS=5.921;HRun=9;HaplotypeScore=67.1364;InbreedingCoeff=0.9930;MQ=74.71;MQ0=1;MQRankSum=-0.527;QD=18.68;ReadPosRankSum=2.571;VQSLOD=4.0826;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,3:34:60.18:348,60,0	1/1:0,7:7:21.06:232,21,0	0/0:21,0:18:14.05:0,14,156	0/0:16,0:13:15.17:0,15,97	0/0:34,0:35:98:0,98,836	0/0:23,1:24:29.81:0,30,488	0/0:12,0:12:35.99:0,36,313	0/0:32,0:32:68.48:0,68,598	0/0:19,0:19:50.99:0,51,443	0/0:18,0:18:44.98:0,45,391	0/0:23,0:23:62.97:0,63,543	1/1:4,16:20:33.09:365,33,0	1/1:3,18:21:24.95:505,25,0	0/0:17,0:17:47.97:0,48,412	1/1:1,22:23:51:564,51,0	1/1:2,18:20:45.12:498,45,0	1/1:3,4:18:34.99:258,35,0	1/1:4,1:20:34.19:188,34,0	0/0:19,1:20:23.80:0,24,436	0/0:14,0:14:38.98:0,39,339	0/0:18,0:18:44.98:0,45,391	1/1:4,10:14:27.07:299,27,0	1/1:5,8:13:24.05:256,24,0	1/1:5,8:13:27.07:299,27,0	0/0:17,0:17:44.99:0,45,391	0/0:18,0:18:47.98:0,48,414	0/0:24,0:24:56.98:0,57,494	0/0:14,0:14:38.98:0,39,339
chr10	51851192	.	T	TGAACCAATCC	4343.31	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=1.531;DP=720;FS=2.410;HRun=0;HaplotypeScore=211.7913;InbreedingCoeff=0.9996;MQ=90.81;MQ0=0;MQRankSum=-9.364;QD=96.52;ReadPosRankSum=1.585;VQSLOD=4.7123;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:84.22:0,84,2257	0/0:13,0:13:36.12:0,36,1114	0/0:25,0:25:60.17:0,60,1726	0/0:33,0:33:69.17:0,69,1819	0/0:19,0:19:48.16:0,48,1512	0/0:30,0:30:78.27:0,78,2259	0/0:26,0:26:66.17:0,66,1815	0/0:38,0:37:84.29:0,84,2451	0/0:23,0:23:66.23:0,66,2077	0/0:30,0:30:75.26:0,75,2219	0/0:17,0:17:45.15:0,45,1361	0/0:19,0:19:45.15:0,45,1414	0/0:27,0:27:75.26:0,75,2223	0/0:27,0:27:72.25:0,72,2220	0/0:24,0:24:66.23:0,66,2030	0/0:30,0:30:84.29:0,84,2627	1/1:14,14:30:63.22:2961,63,0	1/1:10,4:15:30.10:1382,30,0	0/0:28,0:28:60.21:0,60,1768	0/0:26,0:26:72.23:0,72,2144	0/0:34,0:34:93.30:0,93,2858	0/0:32,0:32:90.30:0,90,2712	0/0:18,0:18:45.15:0,45,1346	0/0:30,0:30:81.20:0,81,2285	0/0:27,0:27:78.25:0,78,2320	0/0:26,0:26:69.22:0,69,2008	0/0:28,0:28:72.23:0,72,2198	0/0:13,0:13:36.12:0,36,1134
chr10	51851874	.	A	AAAG	2879.63	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=0.006;DP=725;FS=1.861;HRun=0;HaplotypeScore=120.0696;InbreedingCoeff=0.9859;MQ=91.99;MQ0=0;MQRankSum=-3.938;QD=52.36;ReadPosRankSum=1.775;VQSLOD=6.0072;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,48:55:99:2975,135,0	0/0:10,0:10:30.09:0,30,472	0/0:25,0:25:64.53:0,65,1006	0/0:36,0:36:87.15:0,87,1258	0/0:29,0:29:78.24:0,78,1231	0/0:29,0:29:84.26:0,84,1335	0/0:19,0:19:57.19:0,57,935	0/0:31,0:31:93.30:0,93,1465	0/0:21,0:21:63.22:0,63,1039	0/0:28,0:28:84.26:0,84,1307	0/0:26,0:26:69.24:0,69,1130	0/0:27,0:27:78.25:0,78,1256	0/0:15,0:15:45.15:0,45,740	0/0:23,0:23:63.21:0,63,1013	0/0:31,0:31:93.27:0,93,1435	0/0:22,0:22:63.22:0,63,1032	0/0:34,0:34:99:0,99,1602	0/0:16,0:16:42.12:0,42,652	0/0:10,0:10:27.09:0,27,444	0/0:24,0:24:69.21:0,69,1091	0/0:42,0:42:99:0,120,1978	0/0:27,0:27:75.24:0,75,1207	0/0:19,0:19:54.18:0,54,868	0/0:29,0:29:81.22:0,81,1280	0/0:32,0:31:93.29:0,93,1480	0/0:22,0:22:63.20:0,63,1011	0/0:31,0:31:93.27:0,93,1478	0/0:12,0:12:15.99:0,16,438
chr10	51854277	.	C	CA	2750.12	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-5.244;DP=468;FS=0.413;HRun=9;HaplotypeScore=49.8027;InbreedingCoeff=0.9795;MQ=78.62;MQ0=0;MQRankSum=-0.484;QD=19.10;ReadPosRankSum=3.323;VQSLOD=3.6919;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:47.99:0,48,416	1/1:2,6:9:17.88:180,18,0	0/0:18,0:17:12.42:0,12,209	0/0:9,0:9:8.75:0,9,72	0/0:24,0:24:59.97:0,60,521	0/0:22,0:22:62.98:0,63,547	0/0:9,0:9:20.99:0,21,182	0/0:27,0:27:62.95:0,63,544	0/0:16,0:16:41.92:0,42,354	0/0:19,0:19:50.99:0,51,443	0/0:25,0:25:68.98:0,69,599	1/1:1,10:11:30.08:332,30,0	1/1:2,16:18:42.11:465,42,0	0/0:12,0:13:27.48:0,27,238	1/1:4,13:17:34.34:368,34,0	1/1:2,8:11:26.91:280,27,0	1/1:1,0:18:34.09:170,34,0	1/1:1,0:19:34.04:180,34,0	0/0:13,0:13:38.99:0,39,339	0/0:25,0:25:62.95:0,63,539	0/0:7,0:7:15:0,15,130	1/1:2,14:16:36.10:398,36,0	1/1:1,16:17:36.10:398,36,0	1/1:1,6:7:18.05:199,18,0	0/0:22,0:22:65.98:0,66,570	0/0:23,0:23:59.97:0,60,518	0/0:28,0:28:80.98:0,81,703	0/0:7,0:7:18:0,18,156
chr10	51855570	.	C	CATTATTATT	467.75	PASS	AB=0.875;AC=5;AF=0.089;AN=56;BaseQRankSum=2.231;DP=592;FS=0.000;HRun=0;HaplotypeScore=155.0877;InbreedingCoeff=0.5896;MQ=67.80;MQ0=0;MQRankSum=0.006;QD=24.62;ReadPosRankSum=-1.847;VQSLOD=2.7168;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:48.16:0,48,1386	0/0:4,0:4:9.03:0,9,270	0/0:4,0:4:3.61:0,4,40	0/1:5,0:7:31.47:31,0,54	0/0:28,0:28:75.24:0,75,1975	0/0:25,0:25:75.26:0,75,2177	0/0:21,0:21:57.18:0,57,1538	0/0:37,0:37:87.28:0,87,2411	0/0:23,0:23:69.22:0,69,1948	0/0:27,0:27:75.25:0,75,2113	0/0:23,0:23:57.20:0,57,1631	0/0:27,0:27:72.25:0,72,2123	0/0:27,0:27:81.23:0,81,2162	0/0:26,0:26:78.23:0,78,2166	0/0:24,0:24:63.20:0,63,1692	0/0:23,0:23:69.21:0,69,1943	1/1:2,2:5:9.03:403,9,0	1/1:0,4:7:3.01:144,3,0	0/0:30,0:30:84.28:0,84,2412	0/0:33,0:33:96.32:0,96,2665	0/0:30,0:30:78.23:0,78,2142	0/0:14,0:14:42.14:0,42,1230	0/0:20,0:20:54.17:0,54,1557	0/0:15,0:15:42.14:0,42,1262	0/0:20,0:20:45.12:0,45,1125	0/0:26,0:26:75.24:0,75,2064	0/0:36,0:35:99:0,99,2867	0/0:13,0:13:36:0,36,1080
chr10	51855797	.	GGAGAGGGCACACACAGCTCA	G	1243.32	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=4.764;DP=702;FS=20.768;HRun=0;HaplotypeScore=351.8107;InbreedingCoeff=0.9604;MQ=88.36;MQ0=0;MQRankSum=-4.814;QD=69.07;ReadPosRankSum=0.885;VQSLOD=2.0699;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,141,12673	0/0:11,0:11:33.11:0,33,2805	0/0:30,0:30:87.30:0,87,4458	0/0:30,0:30:87.63:0,88,6002	0/0:23,0:23:69.22:0,69,5561	0/0:29,0:29:84.27:0,84,6983	0/0:25,0:25:66.23:0,66,5105	0/0:23,0:23:63.21:0,63,4964	0/0:23,0:23:60.21:0,60,5343	0/0:21,0:21:60.20:0,60,4745	0/0:21,0:21:63.21:0,63,4439	0/0:33,0:33:96.33:0,96,8056	0/0:31,0:31:93.28:0,93,7459	0/0:23,0:23:63.22:0,63,4834	0/0:39,0:39:99:0,114,9397	0/0:36,0:36:99:0,108,9274	1/1:4,6:10:15.05:844,15,0	1/1:4,4:8:9.03:510,9,0	0/0:21,0:21:60.21:0,60,4214	0/0:20,0:20:60.21:0,60,5020	0/0:42,0:42:99:0,123,11131	0/0:11,0:11:33.11:0,33,3112	0/0:21,0:21:57.19:0,57,4330	0/0:26,0:26:78.27:0,78,6877	0/0:28,0:28:84.29:0,84,7047	0/0:24,0:24:69.24:0,69,5801	0/0:28,0:28:84.27:0,84,7202	0/0:18,0:18:54.13:0,54,4237
chr10	51857296	.	G	GT	1387.40	PASS	AB=0.920;AC=19;AF=0.339;AN=56;BaseQRankSum=3.089;DP=534;FS=2.252;HRun=14;HaplotypeScore=76.4876;InbreedingCoeff=0.3532;MQ=59.45;MQ0=23;MQRankSum=-1.186;QD=6.09;ReadPosRankSum=0.702;VQSLOD=2.7766;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:19:6.08:0,6,165	1/1:6,2:8:17.95:150,18,0	0/0:55,0:19:2.49:0,2,22	0/1:56,1:13:3.29:3,0,9	0/0:23,0:24:51.22:0,51,317	0/0:16,0:20:0.80:0,1,165	0/0:10,0:10:23.58:0,24,149	0/0:21,0:22:12.82:0,13,100	0/1:10,0:13:26.92:27,0,62	0/0:24,0:25:38.50:0,39,227	0/0:23,0:23:4.44:0,4,135	1/1:12,5:17:5.38:215,5,0	1/1:10,5:15:38.58:293,39,0	0/0:8,0:8:13.97:0,14,89	1/1:8,2:10:4.86:143,5,0	1/1:15,3:19:11.66:198,12,0	0/0:10,0:23:25.09:0,25,76	0/0:5,0:18:24.42:0,24,70	0/1:19,0:18:26.11:26,0,95	0/1:12,0:12:0.05:0,0,119	0/0:10,0:7:17.73:0,18,115	0/1:10,2:12:26.68:92,0,27	1/1:9,9:18:41.90:347,42,0	0/1:8,3:11:23.06:60,0,23	0/1:10,3:12:8.65:9,0,78	0/0:25,0:25:16.79:0,17,175	0/0:18,0:18:44.13:0,44,278	0/0:4,0:2:5.91:0,6,38
chr10	51857312	.	GTTTT	G	2772.24	PASS	AB=0.922;AC=21;AF=0.375;AN=56;BaseQRankSum=8.070;DP=511;FS=9.015;HRun=13;HaplotypeScore=87.2658;InbreedingCoeff=0.7652;MQ=56.77;MQ0=35;MQRankSum=-4.511;QD=10.75;ReadPosRankSum=4.917;VQSLOD=-0.6413;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:45.15:0,45,943	1/1:3,6:9:12.01:175,12,0	0/1:58,0:7:0.82:1,0,21	0/1:65,0:13:2.71:14,0,3	0/0:27,0:28:66.22:0,66,1296	0/0:21,0:22:54.18:0,54,1198	0/0:9,0:9:24.08:0,24,467	0/0:17,0:19:39.05:0,39,683	0/0:10,0:11:30.10:0,30,571	0/0:21,0:20:57.09:0,57,1017	0/0:19,0:19:45.14:0,45,920	1/1:11,6:17:25.35:408,25,0	1/1:6,8:14:13.29:280,13,0	0/0:7,0:7:18.06:0,18,394	1/1:5,2:8:3.04:83,3,0	0/1:9,3:13:21.63:189,0,22	1/1:10,6:17:33.01:449,33,0	1/1:11,8:18:9.81:369,10,0	0/0:18,0:15:36.59:0,37,706	0/0:10,0:12:33.11:0,33,642	0/0:11,0:8:21.07:0,21,406	1/1:3,7:10:21.04:301,21,0	1/1:5,15:20:10.41:447,10,0	1/1:2,6:8:18.06:258,18,0	0/0:11,0:10:21.07:0,21,455	0/0:22,0:21:54.18:0,54,1115	0/0:18,0:18:48.16:0,48,859	0/0:4,0:3:6.02:0,6,91
chr10	51857435	.	G	GA	4427.05	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-11.368;DP=485;FS=1.212;HRun=9;HaplotypeScore=51.6988;InbreedingCoeff=0.9699;MQ=74.82;MQ0=0;MQRankSum=0.281;QD=25.01;ReadPosRankSum=4.122;VQSLOD=5.3370;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:56.95:0,57,490	1/1:1,5:6:15.04:166,15,0	0/0:11,0:11:20.35:0,20,161	0/0:9,0:9:17.98:0,18,153	0/0:19,0:21:61.05:0,61,503	0/0:15,0:15:38.99:0,39,339	0/0:3,0:3:9:0,9,78	0/0:25,0:25:68.99:0,69,599	0/0:16,0:16:44.21:0,44,371	0/0:21,0:21:59.98:0,60,521	0/0:15,0:15:38.97:0,39,339	1/1:5,18:24:30.93:552,31,0	1/1:3,16:19:42.11:464,42,0	0/0:11,0:11:29.99:0,30,260	1/1:3,23:26:63.17:697,63,0	1/1:3,17:20:19.07:439,19,0	1/1:9,26:36:74.58:851,75,0	1/1:3,18:21:31.08:560,31,0	0/0:20,0:20:56.99:0,57,495	0/0:24,0:24:68.98:0,69,599	0/0:13,0:13:38.99:0,39,339	1/1:0,9:9:27.07:299,27,0	1/1:2,11:13:30.08:332,30,0	1/1:0,3:3:6.02:66,6,0	0/0:18,0:18:53.99:0,54,468	0/0:19,0:19:44.98:0,45,391	0/0:31,0:32:92.01:0,92,787	0/0:13,0:13:38.99:0,39,338
chr10	51860585	.	TGTGAGAGAGA	T	171.42	PASS	AB=0.940;AC=7;AF=0.125;AN=56;BaseQRankSum=1.365;DP=648;FS=2.310;HRun=0;HaplotypeScore=179.7479;InbreedingCoeff=-0.1002;MQ=48.28;MQ0=26;MQRankSum=-0.996;QD=0.99;ReadPosRankSum=-1.806;VQSLOD=2.8171;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:11,29:40:17.88:90,0,18	0/1:14,0:14:36.40:36,0,57	0/0:30,0:6:17.59:0,18,312	0/1:40,0:7:10.07:10,0,10	0/0:16,0:16:33.05:0,33,988	0/0:26,0:26:54.10:0,54,1899	0/0:23,0:22:45.01:0,45,1490	0/0:23,0:23:50.92:0,51,891	0/0:24,0:24:59.88:0,60,1749	0/0:17,0:16:45:0,45,1052	0/0:16,0:17:30.06:0,30,1081	0/0:22,0:21:20.90:0,21,163	0/0:18,0:17:31.09:0,31,759	0/0:28,0:28:72.10:0,72,2195	0/0:33,0:33:38.85:0,39,285	0/1:26,0:26:97.73:98,0,170	0/0:17,0:17:29.86:0,30,380	0/0:9,0:9:17.96:0,18,242	0/1:13,0:12:6.71:7,0,155	0/0:20,0:19:41.07:0,41,1257	0/0:38,0:36:61.37:0,61,1984	0/0:28,0:28:17.59:0,18,209	0/0:21,0:21:26.30:0,26,603	0/0:26,0:26:14.95:0,15,141	0/1:23,0:23:2.23:2,0,1106	0/1:17,0:15:48.34:48,0,856	0/0:20,0:19:53.74:0,54,1582	0/0:19,0:17:45.08:0,45,1392
chr10	51860587	.	TGAGA	T	442.26	PASS	AB=0.983;AC=16;AF=0.286;AN=56;BaseQRankSum=4.756;DP=654;FS=0.962;HRun=0;HaplotypeScore=133.8278;InbreedingCoeff=0.3183;MQ=48.06;MQ0=31;MQRankSum=-1.198;QD=1.81;ReadPosRankSum=2.472;VQSLOD=2.3295;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:38,0:38:2.74:28,3,0	1/1:5,2:13:2.74:46,3,0	0/0:32,0:6:8.24:0,8,113	0/0:40,0:6:2.80:0,3,13	0/0:17,0:17:23.84:0,24,409	0/0:26,0:26:45.14:0,45,855	0/0:22,0:21:41.56:0,42,698	0/0:22,0:22:21.92:0,22,299	0/0:22,0:23:16.67:0,17,692	0/0:18,0:17:29.74:0,30,422	0/0:17,0:17:26.92:0,27,479	0/1:22,0:21:0:0,0,0	0/0:18,0:17:20.91:0,21,271	0/0:29,0:29:48.35:0,48,858	1/1:18,7:33:11.97:191,12,0	1/1:14,5:26:8.96:115,9,0	0/0:18,0:18:5.99:0,6,79	0/0:10,0:10:9.03:0,9,128	1/1:10,3:12:4.13:86,4,0	0/1:20,0:19:15.15:15,0,460	0/0:41,0:39:7.03:0,7,580	0/0:29,0:29:2.96:0,3,35	0/0:21,0:21:11.18:0,11,206	0/0:26,0:26:0:0,0,0	0/1:22,0:22:66.37:66,0,415	0/1:17,0:16:13.65:14,0,268	0/1:19,1:19:18.81:19,0,400	0/1:19,0:17:17.82:18,0,495
chr10	51860606	.	G	GAGAGAGAGAGAA	298.79	PASS	AB=0.654;AC=7;AF=0.125;AN=56;BaseQRankSum=2.101;DP=707;FS=2.393;HRun=0;HaplotypeScore=218.9881;InbreedingCoeff=0.6054;MQ=52.08;MQ0=30;MQRankSum=-1.931;QD=4.27;ReadPosRankSum=-2.295;VQSLOD=2.2182;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:23.22:0,23,242	0/0:13,0:13:20.73:0,21,207	0/0:50,0:13:32.02:0,32,428	0/0:55,0:9:4.69:0,5,174	0/0:23,0:23:52.89:0,53,1037	0/0:23,0:23:51.12:0,51,1390	0/0:28,0:27:56.51:0,57,1535	0/0:28,0:28:61.15:0,61,786	0/0:22,0:22:54.09:0,54,1475	0/0:19,0:18:40.55:0,41,681	0/0:23,0:22:45.04:0,45,850	1/1:20,0:19:2.88:15,3,0	0/0:17,0:17:32.20:0,32,456	0/0:31,0:31:68.01:0,68,1488	0/0:29,0:29:11.57:0,12,344	0/0:21,0:21:14:0,14,247	0/1:8,7:17:12.08:14,0,12	1/1:11,0:11:26.94:383,27,0	0/0:17,0:16:25.16:0,25,415	0/0:23,0:22:48.67:0,49,1186	0/0:40,0:38:75.09:0,75,1636	0/0:30,0:30:2.50:0,2,9	0/0:20,0:20:18.08:0,18,536	1/1:22,0:22:0.47:1,0,0	0/0:24,0:24:45.07:0,45,1070	0/0:18,0:17:43.62:0,44,787	0/0:22,0:22:56.99:0,57,1017	0/0:18,0:16:38.96:0,39,954
chr10	51861980	.	T	TC	4216.78	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=10.653;DP=644;FS=0.417;HRun=0;HaplotypeScore=73.0586;InbreedingCoeff=0.9973;MQ=94.42;MQ0=0;MQRankSum=-2.826;QD=42.59;ReadPosRankSum=3.099;VQSLOD=5.4329;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,120,1675	0/0:6,0:6:18.06:0,18,251	0/0:30,0:30:84.24:0,84,1113	0/0:29,0:29:78.24:0,78,1058	0/0:10,0:10:30.08:0,30,400	0/0:25,0:24:75.25:0,75,1048	0/0:24,0:24:72.24:0,72,1007	0/0:22,0:22:63.21:0,63,881	0/0:19,0:19:54.17:0,54,738	0/0:23,0:23:63.21:0,63,881	0/0:15,0:15:39.08:0,39,494	1/1:0,18:18:51.17:815,51,0	1/1:0,20:20:57.19:911,57,0	0/0:32,0:32:93.31:0,93,1301	0/0:26,0:26:78.26:0,78,1091	0/0:24,0:24:72.23:0,72,990	0/0:27,0:27:81.27:0,81,1133	0/0:34,0:34:99:0,102,1404	0/0:31,0:31:93.28:0,93,1265	0/0:28,0:28:81.23:0,81,1080	0/0:21,0:21:63.20:0,63,865	1/1:0,16:16:39.13:623,39,0	1/1:2,9:11:24.08:382,24,0	1/1:0,34:34:93.32:1487,93,0	0/0:10,0:10:30.09:0,30,401	0/0:32,0:32:93.31:0,93,1298	0/0:27,0:27:78.26:0,78,1091	0/0:10,0:10:30.10:0,30,419
chr10	51864225	.	C	CA	9184.72	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=19.209;DP=742;FS=3.822;HRun=2;HaplotypeScore=87.8672;InbreedingCoeff=0.9999;MQ=93.64;MQ0=0;MQRankSum=-3.015;QD=38.59;ReadPosRankSum=4.210;VQSLOD=5.3289;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:47.58:0,48,649	1/1:0,16:16:45.15:628,45,0	0/0:33,0:33:71.18:0,71,856	0/0:31,0:31:69.22:0,69,928	0/0:26,0:26:75.22:0,75,910	0/0:33,0:33:96.29:0,96,1177	0/0:30,0:30:87.27:0,87,1079	0/0:40,0:40:99:0,114,1413	0/0:28,0:28:75.18:0,75,930	0/0:33,0:33:93.29:0,93,1145	0/0:27,0:27:75.21:0,75,903	1/1:1,26:28:75.25:1057,75,0	1/1:0,30:30:90.29:1250,90,0	0/0:28,0:28:84.25:0,84,1028	1/1:2,30:32:81.27:1142,81,0	1/1:1,23:24:60.20:847,60,0	1/1:0,22:22:63.21:885,63,0	1/1:0,18:18:54.18:759,54,0	0/0:11,0:11:30.09:0,30,361	0/0:45,0:45:99:0,126,1523	0/0:38,0:38:99:0,108,1325	1/1:1,22:23:66.22:928,66,0	1/1:0,14:14:39.11:549,39,0	1/1:0,31:31:81.27:1141,81,0	0/0:25,0:25:69.19:0,69,830	0/0:19,0:19:54.16:0,54,659	0/0:24,0:24:72.23:0,72,890	0/0:14,0:14:39.12:0,39,483
chr10	51864784	.	GAGAC	G	947.45	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=4.020;DP=654;FS=4.924;HRun=0;HaplotypeScore=141.7538;InbreedingCoeff=0.8083;MQ=62.08;MQ0=20;MQRankSum=-0.242;QD=9.47;ReadPosRankSum=0.718;VQSLOD=2.5267;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:35:50.40:0,50,387	1/1:0,8:8:1.17:15,1,0	0/0:33,0:21:13.84:0,14,325	0/0:42,0:23:8.86:0,9,172	0/0:30,0:29:65.69:0,66,632	0/0:27,0:25:30.41:0,30,430	0/0:28,0:27:47.88:0,48,463	0/0:35,0:33:77.12:0,77,640	0/0:28,0:28:43.10:0,43,749	0/1:17,0:16:16.93:17,0,271	0/0:18,0:18:44.92:0,45,447	0/0:17,0:16:35.84:0,36,286	0/0:18,0:18:50.72:0,51,413	0/0:14,0:13:32.98:0,33,306	1/1:24,0:22:41.09:371,41,0	1/1:16,0:15:29.98:283,30,0	1/1:23,0:19:39.87:288,40,0	1/1:12,0:11:11.24:140,11,0	0/0:28,0:23:47.79:0,48,452	0/0:22,0:21:44.91:0,45,417	0/0:17,0:16:29.84:0,30,302	0/0:21,0:21:37.70:0,38,298	0/0:21,0:20:26.92:0,27,218	0/0:31,0:28:18.68:0,19,165	0/0:21,0:21:42:0,42,425	0/0:26,0:24:64.01:0,64,651	0/0:21,0:18:50.62:0,51,487	0/0:18,0:16:38.57:0,39,370
chr10	51864786	.	GAC	G	1041.59	PASS	AB=0.950;AC=14;AF=0.250;AN=56;BaseQRankSum=6.286;DP=653;FS=8.613;HRun=0;HaplotypeScore=121.5141;InbreedingCoeff=0.5882;MQ=60.15;MQ0=21;MQRankSum=-2.855;QD=6.13;ReadPosRankSum=0.396;VQSLOD=2.6578;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:35:50.31:0,50,418	1/1:8,0:8:5.87:35,6,0	0/0:33,0:21:13.84:0,14,325	0/0:40,0:21:8.20:0,8,177	0/0:27,0:26:65.64:0,66,597	0/0:26,0:24:42.62:0,43,366	0/0:29,0:28:47.21:0,47,386	0/0:36,0:34:73.74:0,74,651	0/0:27,0:27:39.74:0,40,668	0/1:12,4:15:54.14:54,0,193	0/0:18,0:18:42.38:0,42,370	0/0:17,0:16:21.13:0,21,235	0/1:18,0:18:2.28:2,0,234	0/0:14,0:13:32.93:0,33,290	1/1:24,0:22:44.65:370,45,0	1/1:16,0:15:29.65:241,30,0	1/1:23,1:20:39.32:322,39,0	1/1:12,0:11:3.19:155,3,0	0/1:28,0:23:26.82:27,0,401	0/0:20,1:20:44.88:0,45,404	0/0:19,0:18:25.01:0,25,291	0/0:22,0:21:37.93:0,38,298	0/0:20,0:19:26.92:0,27,218	0/0:30,0:27:20.80:0,21,165	0/0:22,0:22:41.97:0,42,396	0/0:25,0:23:26.07:0,26,559	0/1:24,0:21:5.27:5,0,420	0/0:19,0:17:38.52:0,39,310
chr10	51864788	.	CAG	C	212.94	PASS	AB=0.955;AC=17;AF=0.340;AN=50;BaseQRankSum=3.721;DP=650;FS=1.939;HRun=0;HaplotypeScore=126.0753;InbreedingCoeff=0.0564;MQ=58.40;MQ0=25;MQRankSum=-1.878;QD=0.73;ReadPosRankSum=1.808;VQSLOD=2.2019;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,1:33:2.75:0,3,25	0/0:8,0:8:0:0,0,0	./.	./.	0/0:28,1:28:15.02:0,15,173	0/1:26,0:24:1.43:1,0,124	0/1:30,0:29:11.26:11,0,19	0/0:35,0:33:7.14:0,7,40	0/1:22,4:26:40.10:40,0,346	0/1:15,1:15:16.14:55,0,16	0/1:20,0:19:16.53:17,0,42	1/1:14,3:16:3.01:32,3,0	1/1:17,2:18:14.62:138,15,0	0/0:13,0:12:6.02:0,6,85	1/1:23,0:21:4.80:17,5,0	1/1:15,0:14:2.18:5,2,0	0/1:23,0:19:11.80:12,0,27	0/0:11,0:10:5.08:0,5,47	0/1:31,0:26:7.35:7,0,98	0/0:21,0:20:6:0,6,60	0/0:19,0:18:11.99:0,12,126	0/1:16,6:21:0:0,0,0	./.	0/0:22,8:27:0.47:0,0,1	0/0:19,3:22:9.01:0,9,113	0/0:29,0:27:3.62:0,4,245	0/1:23,0:20:9.97:10,0,105	0/0:20,0:17:3.01:0,3,42
chr10	51864832	.	GAC	G	288.51	PASS	AB=0.981;AC=14;AF=0.269;AN=52;BaseQRankSum=5.135;DP=616;FS=9.206;HRun=0;HaplotypeScore=122.2312;InbreedingCoeff=0.0432;MQ=41.18;MQ0=44;MQRankSum=-1.282;QD=1.08;ReadPosRankSum=-3.833;VQSLOD=0.5474;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:32,0:27:46.97:74,0,47	1/1:8,0:7:0.47:1,0,0	./.	./.	0/0:31,0:26:52.62:0,53,464	0/1:31,0:27:14.36:14,0,347	0/1:36,0:33:56.49:56,0,167	0/0:47,0:45:21.55:0,22,325	0/0:24,0:23:24.11:0,24,468	0/0:26,0:22:35.81:0,36,366	0/0:18,0:15:13.47:0,13,259	0/1:21,0:18:5.73:7,0,6	0/1:18,0:17:2.23:39,0,2	0/0:9,1:9:21:0,21,237	0/1:13,0:13:3.75:52,0,4	1/1:12,1:11:0.08:41,0,0	0/0:18,0:13:5.53:0,6,31	0/1:9,0:8:14.42:40,0,14	0/1:30,1:26:81.14:81,0,213	0/0:27,1:25:45.18:0,45,353	0/0:41,0:36:49.90:0,50,381	0/1:17,0:15:0.04:0,0,0	0/0:18,0:16:1.86:0,2,6	0/1:35,0:29:13.85:14,0,16	0/0:26,0:25:38.98:0,39,374	0/0:28,0:25:47.77:0,48,571	0/0:22,0:21:13.21:0,13,332	0/0:12,0:11:3.79:0,4,126
chr10	51864844	.	GACAGAC	G	112.74	PASS	AB=0.955;AC=9;AF=0.173;AN=52;BaseQRankSum=6.037;DP=586;FS=0.000;HRun=0;HaplotypeScore=145.3026;InbreedingCoeff=0.2320;MQ=42.43;MQ0=43;MQRankSum=-1.043;QD=1.16;ReadPosRankSum=-2.984;VQSLOD=1.6015;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:29:31.94:0,32,313	1/1:7,0:6:1.25:3,1,0	./.	./.	0/0:26,0:22:45.15:0,45,1241	0/0:27,0:24:56.40:0,56,1307	0/0:35,0:31:47.82:0,48,1033	0/0:41,0:37:99:0,102,1923	0/0:21,0:20:45.62:0,46,981	0/0:26,0:23:66.18:0,66,1458	0/0:18,0:14:33.11:0,33,860	0/0:20,0:17:4.43:0,4,18	0/1:18,0:17:19.39:36,0,19	0/0:12,0:12:30.10:0,30,714	0/1:17,0:14:29.96:34,0,30	0/1:12,0:10:19.93:20,0,31	1/1:17,0:13:6.25:50,6,0	0/1:9,0:8:48:90,0,48	0/0:24,0:19:49.27:0,49,994	0/0:24,0:22:48.08:0,48,1194	0/0:35,0:29:51.03:0,51,1265	0/1:12,4:15:0.05:0,0,0	0/0:14,0:14:2.73:0,3,20	0/0:32,3:28:5.88:0,6,80	0/0:29,0:28:57.20:0,57,1349	0/0:29,0:25:73.49:0,73,1673	0/0:26,0:25:66.70:0,67,1595	0/0:10,0:9:21.07:0,21,487
chr10	51864848	.	GAC	G	62.33	PASS	AB=1.000;AC=8;AF=0.154;AN=52;BaseQRankSum=7.570;DP=585;FS=0.000;HRun=0;HaplotypeScore=117.4767;InbreedingCoeff=0.5763;MQ=43.10;MQ0=44;MQRankSum=-1.984;QD=0.80;ReadPosRankSum=-0.757;VQSLOD=1.5473;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,2:32:17.20:0,17,227	0/0:6,0:5:2.96:0,3,19	./.	./.	0/0:29,0:25:54.17:0,54,971	0/0:26,0:24:59.21:0,59,1017	0/0:34,0:30:50.96:0,51,812	0/0:38,0:34:99:0,102,1645	0/0:21,0:20:48.08:0,48,797	0/0:26,0:23:66.22:0,66,1132	0/0:20,0:16:36.11:0,36,633	1/1:17,2:16:4.80:18,5,0	1/1:17,1:17:15.52:64,16,0	0/0:12,0:12:30.10:0,30,532	0/0:15,0:12:2.78:0,3,37	0/0:12,0:10:6.53:0,7,57	1/1:15,0:11:6.39:50,6,0	0/1:8,0:7:32.75:56,0,33	0/0:22,0:17:37.16:0,37,692	0/0:24,0:22:48.06:0,48,859	0/0:37,0:30:54.15:0,54,944	0/1:18,0:16:0.04:0,0,0	0/0:14,1:12:1.07:0,1,3	0/0:37,0:29:4.91:0,5,61	0/0:29,0:28:57.19:0,57,1005	0/0:30,0:26:77.93:0,78,1356	0/0:29,0:27:58.53:0,59,1233	0/0:10,0:9:21.05:0,21,357
chr10	51864852	.	GAC	G	60.18	PASS	AB=0.958;AC=8;AF=0.154;AN=52;BaseQRankSum=7.680;DP=599;FS=2.098;HRun=0;HaplotypeScore=115.6387;InbreedingCoeff=0.5741;MQ=43.73;MQ0=42;MQRankSum=-2.293;QD=0.75;ReadPosRankSum=-0.658;VQSLOD=2.3545;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,2:34:16.29:0,16,195	0/0:6,0:5:2.96:0,3,19	./.	./.	0/0:29,0:25:54.18:0,54,990	0/0:27,0:25:61.38:0,61,1054	0/0:34,0:30:50.89:0,51,798	0/0:37,0:34:99:0,99,1616	0/0:21,0:20:47.52:0,48,813	0/0:24,0:22:66.22:0,66,1152	0/0:22,0:18:38.71:0,39,703	1/1:18,0:15:4.68:17,5,0	1/1:18,0:17:15.15:58,15,0	0/0:14,0:14:36.10:0,36,597	0/0:15,0:12:2.75:0,3,36	0/0:12,0:11:6.44:0,6,55	1/1:15,0:11:6.40:52,6,0	0/1:10,1:10:32.73:58,0,33	0/0:22,0:17:41.21:0,41,721	0/0:24,0:22:46.97:0,47,848	0/0:37,0:29:51.17:0,51,931	0/1:18,0:16:0.04:0,0,0	0/0:15,0:12:1.07:0,1,3	0/0:35,1:28:4.91:0,5,61	0/0:31,0:30:63.21:0,63,1090	0/0:31,0:27:78.27:0,78,1381	0/0:31,0:29:79.35:0,79,1350	0/0:10,0:9:21.05:0,21,355
chr10	51864856	.	GAC	G	444.89	PASS	AB=0.787;AC=11;AF=0.212;AN=52;BaseQRankSum=7.204;DP=606;FS=1.922;HRun=0;HaplotypeScore=114.8596;InbreedingCoeff=0.6072;MQ=44.16;MQ0=39;MQRankSum=-1.966;QD=3.35;ReadPosRankSum=-1.878;VQSLOD=2.4231;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:36:36.11:0,36,365	0/0:6,0:5:3.01:0,3,40	./.	./.	0/0:30,0:26:54.18:0,54,976	0/0:30,0:28:69.60:0,70,1071	0/0:34,0:30:47.76:0,48,719	0/0:37,0:34:97.95:0,98,1391	0/0:21,0:20:43.59:0,44,741	0/0:26,0:24:70.12:0,70,1159	0/0:22,0:18:38.71:0,39,690	1/1:4,14:15:5.73:90,6,0	1/1:3,15:17:18.53:272,19,0	0/0:14,0:14:36.12:0,36,584	0/0:15,0:12:8.76:0,9,94	0/0:11,0:10:14.91:0,15,174	1/1:16,0:12:9.38:74,9,0	0/1:12,0:11:8.90:69,0,9	0/0:20,0:17:37.01:0,37,637	0/0:22,0:20:46.04:0,46,835	0/0:38,0:30:54.17:0,54,938	0/1:9,10:16:0.02:0,0,0	1/1:6,8:12:2.67:46,3,0	0/1:19,15:28:28.83:40,0,29	0/0:30,0:29:63.21:0,63,1062	0/0:33,0:29:78.65:0,79,1299	0/0:30,0:29:78.86:0,79,1298	0/0:10,0:9:20.10:0,20,305
chr10	51865371	.	T	TA	6482.64	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-14.616;DP=849;FS=4.979;HRun=1;HaplotypeScore=78.9689;InbreedingCoeff=0.9990;MQ=83.25;MQ0=0;MQRankSum=-6.213;QD=41.82;ReadPosRankSum=4.265;VQSLOD=5.2258;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:60,0:60:99:0,178,2281	0/0:12,0:12:33.11:0,33,428	0/0:34,0:34:72.88:0,73,927	0/0:16,0:16:48.08:0,48,532	0/0:32,0:32:93.28:0,93,1190	0/0:20,0:20:57.19:0,57,740	0/0:19,0:19:57.17:0,57,724	0/0:31,0:31:90.26:0,90,1122	0/0:34,0:34:99:0,102,1323	0/0:39,0:39:99:0,117,1505	0/0:22,0:22:66.21:0,66,857	1/1:0,39:39:99:1614,108,0	1/1:1,28:29:84.28:1252,84,0	0/0:29,0:29:87.25:0,87,1096	0/0:36,0:36:99:0,105,1348	0/0:33,0:33:99:0,99,1271	0/0:40,0:40:99:0,114,1478	0/0:8,0:8:21.05:0,21,258	0/0:35,0:35:99:0,99,1270	0/0:41,0:41:99:0,123,1566	0/0:49,0:49:99:0,132,1712	1/1:1,25:26:72.20:1054,72,0	1/1:0,17:17:51.17:764,51,0	1/1:1,43:43:99:1798,120,0	0/0:29,0:28:87.27:0,87,1116	0/0:33,0:33:99:0,99,1270	0/0:24,0:23:69.22:0,69,894	0/0:18,0:17:51.17:0,51,662
chr10	51866545	.	AAAACAT	A	1441.62	PASS	AB=1.000;AC=10;AF=0.179;AN=56;BaseQRankSum=7.405;DP=470;FS=7.164;HRun=0;HaplotypeScore=103.0654;InbreedingCoeff=0.4163;MQ=73.55;MQ0=6;MQRankSum=-7.286;QD=11.53;ReadPosRankSum=3.527;VQSLOD=1.7999;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:28:9.16:9,0,25	0/1:6,0:6:12.17:24,0,12	0/0:29,0:18:54.14:0,54,947	0/0:39,0:26:65.80:0,66,1418	0/0:16,0:16:45.25:0,45,1089	0/0:15,0:15:36.07:0,36,667	0/0:17,0:17:23.97:0,24,579	0/0:23,0:23:62.03:0,62,1125	0/0:9,0:9:27.08:0,27,545	0/0:14,0:14:42.13:0,42,833	0/0:10,0:10:20.86:0,21,371	0/0:10,0:10:19.01:0,19,108	0/0:10,0:10:2.85:0,3,27	0/0:18,0:18:52.06:0,52,1139	0/1:11,0:11:33.36:33,0,58	1/1:12,0:12:5.93:59,6,0	1/1:1,32:34:33.10:635,33,0	1/1:16,3:20:51.16:808,51,0	0/0:8,0:8:24.05:0,24,390	0/0:12,0:12:32.95:0,33,452	0/0:23,0:22:60.07:0,60,1035	0/1:14,0:14:27.69:28,0,109	0/0:11,0:11:16.45:0,16,84	0/0:25,0:25:3:0,3,26	0/0:17,0:17:50.52:0,51,949	0/0:17,0:17:51.16:0,51,986	0/0:20,0:18:52.59:0,53,866	0/0:2,0:2:3.01:0,3,86
chr10	51866547	.	AACATAC	A	1439.25	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=7.927;DP=475;FS=11.022;HRun=0;HaplotypeScore=105.1869;InbreedingCoeff=0.7878;MQ=72.43;MQ0=6;MQRankSum=-3.819;QD=7.74;ReadPosRankSum=2.945;VQSLOD=1.2120;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:28:11.97:12,0,18	1/1:0,0:7:8.84:91,9,0	0/0:29,0:18:41.14:0,41,420	0/0:38,0:25:73.26:0,73,690	0/0:16,0:16:41.72:0,42,823	0/0:14,0:15:29.70:0,30,386	0/0:17,0:18:24.84:0,25,247	0/0:23,0:23:59.15:0,59,524	0/0:10,0:10:24:0,24,325	0/0:13,0:13:35.50:0,35,501	0/0:10,0:10:17.97:0,18,201	1/1:10,0:10:17.18:147,17,0	1/1:1,0:10:2.48:12,2,0	0/0:18,0:18:39:0,39,761	1/1:9,0:11:23.99:242,24,0	1/1:0,0:12:5.94:99,6,0	1/1:33,0:33:30.38:420,30,0	1/1:21,0:21:39.63:421,40,0	0/0:8,0:8:17.99:0,18,197	0/0:12,0:12:20.36:0,20,182	0/0:23,0:22:50.62:0,51,560	1/1:1,12:14:3.01:70,3,0	1/1:12,0:12:16.37:117,16,0	1/1:3,25:28:1.25:3,1,0	0/0:18,0:18:44.91:0,45,585	0/0:17,0:17:50.98:0,51,623	0/0:20,0:18:49.27:0,49,456	0/0:1,0:1:3.01:0,3,66
chr10	51866549	.	CAT	C	1066	PASS	AB=1.000;AC=24;AF=0.429;AN=56;BaseQRankSum=8.398;DP=467;FS=10.159;HRun=0;HaplotypeScore=79.0722;InbreedingCoeff=0.7592;MQ=70.61;MQ0=9;MQRankSum=-4.600;QD=5.23;ReadPosRankSum=2.265;VQSLOD=1.5736;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,27:28:5.95:53,6,0	1/1:7,0:7:8.11:38,8,0	0/0:27,0:16:41.14:0,41,420	0/0:38,0:25:73.26:0,73,690	0/0:16,0:16:32.30:0,32,392	0/0:16,0:16:21.61:0,22,234	0/1:17,0:17:3.89:4,0,180	0/0:23,0:23:59.44:0,59,525	0/0:9,0:9:24:0,24,273	0/0:12,0:12:31.10:0,31,259	0/0:10,0:10:17.89:0,18,166	1/1:9,0:9:26.95:220,27,0	1/1:9,0:9:3:25,3,0	0/0:14,1:15:38.98:0,39,450	1/1:11,0:11:23.89:187,24,0	1/1:13,0:12:5.96:43,6,0	1/1:33,0:33:32.13:191,32,0	1/1:21,0:21:31.96:305,32,0	0/0:7,0:7:12.36:0,12,120	0/0:12,0:12:20.36:0,20,166	0/0:24,0:23:45.36:0,45,380	1/1:13,0:13:2.99:23,3,0	1/1:7,5:12:16.71:118,17,0	1/1:26,0:26:2.99:24,3,0	0/0:17,0:17:44.73:0,45,420	0/0:17,0:17:47.92:0,48,479	0/0:20,0:18:15:0,15,288	0/1:3,0:3:7.10:38,0,7
chr10	51866551	.	TAC	T	268.52	PASS	AB=0.947;AC=29;AF=0.558;AN=52;BaseQRankSum=4.231;DP=485;FS=0.991;HRun=0;HaplotypeScore=83.8977;InbreedingCoeff=0.1972;MQ=67.26;MQ0=13;MQRankSum=1.577;QD=0.87;ReadPosRankSum=-0.739;VQSLOD=1.3117;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:35,0:31:2.94:18,3,0	1/1:7,0:7:0.57:2,1,0	./.	./.	0/1:16,0:17:19.68:20,0,132	0/1:11,3:15:28.12:37,0,28	1/1:12,4:16:5.47:43,5,0	0/0:22,0:22:4.59:0,5,16	0/0:11,0:11:11.98:0,12,114	0/1:14,0:14:27.24:27,0,33	0/0:11,0:11:2.93:0,3,24	0/1:10,0:10:0.01:0,0,0	1/1:9,0:9:2.68:11,3,0	0/0:18,0:17:21.92:0,22,197	1/1:11,0:11:5.44:24,5,0	1/1:13,0:12:5.64:27,6,0	1/1:36,0:35:0.98:3,1,0	0/1:22,0:22:5.70:6,0,29	1/1:8,0:8:3.01:30,3,0	0/0:12,0:12:2.37:0,2,8	0/1:22,0:24:27.43:41,0,27	1/1:14,0:14:2.84:14,3,0	0/1:13,0:13:0:0,0,0	1/1:27,0:27:1.25:3,1,0	0/0:18,0:18:3.15:0,3,119	0/0:17,0:17:12.88:0,13,113	1/1:17,0:16:4.85:99,5,0	0/0:3,0:3:0:0,0,0
chr10	51866938	.	G	GGAAAGGGAGGCATTTA	22390.37	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-1.870;DP=614;FS=5.356;HRun=0;HaplotypeScore=258.9266;InbreedingCoeff=0.9983;MQ=80.22;MQ0=0;MQRankSum=-16.287;QD=164.64;ReadPosRankSum=-0.061;VQSLOD=4.3384;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:17,17:36:90.27:5695,90,0	1/1:4,3:8:21.07:1368,21,0	0/0:23,0:23:57.18:0,57,2077	0/0:18,0:18:54.16:0,54,2004	0/0:30,0:30:87.26:0,87,3595	0/0:26,0:26:75.21:0,75,3099	0/0:25,0:25:69.24:0,69,2920	0/0:39,0:39:99:0,111,4522	0/0:16,0:16:48.16:0,48,2272	0/0:25,0:25:69.23:0,69,2857	0/0:13,0:13:36.12:0,36,1490	0/0:29,0:29:84.29:0,84,3893	0/0:20,0:20:57.18:0,57,2401	0/0:20,0:20:60.21:0,60,2720	1/1:10,8:20:57.16:3967,57,0	1/1:13,8:25:63.22:4587,63,0	1/1:18,8:29:57.20:3863,57,0	1/1:12,6:18:48.16:2910,48,0	0/0:15,0:15:45.15:0,45,2033	0/0:23,0:23:63.20:0,63,2739	0/0:21,0:20:60.18:0,60,2628	0/0:25,0:25:69.24:0,69,2956	0/0:18,0:18:54.19:0,54,2449	0/0:17,0:17:42.14:0,42,1723	0/0:19,0:19:57.20:0,57,2407	0/0:29,0:29:87.29:0,87,3672	0/0:20,0:20:54.18:0,54,2509	0/0:7,0:7:21.07:0,21,780
chr10	51867181	.	A	AT	4490.20	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=5.714;DP=623;FS=1.166;HRun=8;HaplotypeScore=62.6075;InbreedingCoeff=0.9161;MQ=75.91;MQ0=0;MQRankSum=-1.980;QD=28.06;ReadPosRankSum=2.470;VQSLOD=5.3985;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,114,1043	0/0:5,0:5:12:0,12,110	0/0:15,0:16:38.05:0,38,335	0/1:8,0:8:7.54:8,0,123	0/0:24,0:24:41.47:0,41,547	0/0:19,0:19:54.01:0,54,489	0/0:21,0:21:63.02:0,63,572	0/0:27,0:27:53.97:0,54,484	0/0:19,0:19:51.02:0,51,467	0/0:32,0:32:84.04:0,84,769	0/0:13,0:13:36.01:0,36,329	1/1:3,18:21:54.16:619,54,0	1/1:4,17:22:45.13:518,45,0	0/0:27,0:27:72.01:0,72,654	0/0:35,0:35:99:0,99,896	0/0:24,0:24:63.03:0,63,577	1/1:0,31:31:84.25:965,84,0	1/1:2,18:20:45.13:519,45,0	0/0:25,0:25:63.01:0,63,570	0/0:30,0:30:87.05:0,87,796	0/0:28,0:28:72.01:0,72,654	1/1:2,17:19:51.15:589,51,0	1/1:3,13:16:42.12:478,42,0	1/1:1,22:23:69.20:795,69,0	0/0:22,0:22:66.01:0,66,594	0/0:20,0:20:51.01:0,51,461	0/0:28,0:27:74.99:0,75,674	0/0:7,0:7:21.01:0,21,192
chr10	51869630	.	TA	T	182.16	PASS	AB=0.917;AC=4;AF=0.071;AN=56;BaseQRankSum=4.509;DP=304;FS=30.672;HRun=10;HaplotypeScore=28.5730;InbreedingCoeff=0.3895;MQ=58.27;MQ0=14;MQRankSum=-0.147;QD=7.29;ReadPosRankSum=-1.180;VQSLOD=-0.4723;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,11:11:29.99:260,30,0	0/0:4,0:4:12.03:0,12,133	0/1:4,1:5:20.93:21,0,85	0/1:7,0:5:14.46:14,0,51	0/0:19,0:18:48.09:0,48,515	0/0:14,1:15:19.05:0,19,430	0/0:9,0:9:21.02:0,21,219	0/0:18,0:17:42.11:0,42,464	0/0:7,0:7:21.05:0,21,225	0/0:14,0:14:33.09:0,33,365	0/0:7,0:7:18.05:0,18,197	0/0:7,0:7:21.06:0,21,232	0/0:6,0:4:12.03:0,12,133	0/0:13,0:12:30.08:0,30,332	0/0:5,0:5:15.04:0,15,166	0/0:12,0:11:33.06:0,33,353	0/0:14,0:11:30.03:0,30,311	0/0:15,0:13:39.11:0,39,431	0/0:14,0:15:29.91:0,30,313	0/0:16,0:16:48.13:0,48,531	0/0:9,0:8:21.06:0,21,232	0/0:6,0:6:15.04:0,15,166	0/0:11,0:10:27.07:0,27,299	0/0:14,0:12:33.09:0,33,365	0/0:11,0:11:30.04:0,30,318	0/0:10,1:11:4.02:0,4,273	0/0:16,1:15:22:0,22,446	0/0:4,0:4:12.03:0,12,133
chr10	51871837	.	AT	A	3448.40	PASS	AB=0.917;AC=17;AF=0.304;AN=56;BaseQRankSum=9.530;DP=528;FS=1.708;HRun=8;HaplotypeScore=56.6052;InbreedingCoeff=0.9455;MQ=77.45;MQ0=0;MQRankSum=-1.861;QD=22.39;ReadPosRankSum=1.245;VQSLOD=4.0552;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:20.52:0,21,124	1/1:0,9:9:24.04:232,24,0	0/0:10,0:10:24.14:0,24,273	0/0:15,0:15:26.94:0,27,268	0/0:35,0:35:93.27:0,93,1112	0/0:22,0:22:63.19:0,63,751	0/0:8,0:8:24.07:0,24,290	0/0:22,0:22:54.16:0,54,642	0/0:16,0:16:48.15:0,48,579	0/0:24,0:24:66.18:0,66,781	0/0:29,0:29:81.25:0,81,977	1/1:1,16:17:48.07:463,48,0	1/1:0,13:13:36.06:348,36,0	0/0:18,0:18:54.17:0,54,652	1/1:1,20:21:51.08:492,51,0	1/1:0,29:29:75.12:724,75,0	0/0:14,0:14:35.24:0,35,221	0/0:14,0:14:41.18:0,41,261	0/0:15,0:15:39.11:0,39,462	0/0:21,0:21:63.19:0,63,752	0/1:10,1:11:1.89:2,0,263	1/1:3,13:16:39.01:367,39,0	1/1:5,21:26:23.85:514,24,0	1/1:0,12:12:32.97:306,33,0	0/0:30,0:30:78.24:0,78,942	0/0:21,0:21:60.18:0,60,715	0/0:41,0:42:99:0,121,1418	0/0:9,0:9:27.08:0,27,326
chr10	51872350	.	TGG	T	1892.76	PASS	AB=0.980;AC=18;AF=0.321;AN=56;BaseQRankSum=4.928;DP=551;FS=4.362;HRun=4;HaplotypeScore=98.4884;InbreedingCoeff=0.6370;MQ=71.42;MQ0=10;MQRankSum=-2.781;QD=9.01;ReadPosRankSum=1.696;VQSLOD=-0.0507;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:19:20.87:158,21,0	1/1:3,3:6:12.91:138,13,0	0/0:24,0:15:42.04:0,42,408	0/0:22,0:15:41.92:0,42,395	0/0:14,0:14:25.06:0,25,250	0/0:15,0:15:33.32:0,33,415	0/0:18,0:18:52.05:0,52,489	0/0:19,0:19:56.29:0,56,553	0/0:16,0:16:42.89:0,43,540	0/0:15,0:15:25.66:0,26,395	0/0:17,0:17:29.50:0,29,462	1/1:16,1:17:5.07:226,5,0	0/1:22,0:22:31.04:233,0,31	0/0:25,0:25:57.33:0,57,741	1/1:4,19:22:15.27:187,15,0	1/1:11,1:12:24.43:209,24,0	1/1:31,0:29:14.74:284,15,0	1/1:21,0:20:22:216,22,0	0/0:9,0:7:17.65:0,18,180	0/0:24,0:24:61.88:0,62,776	0/0:58,0:57:99:0,110,1156	0/1:21,1:22:69.97:205,0,70	0/1:12,0:12:43.31:98,0,43	0/1:24,1:24:99:137,0,106	0/0:15,0:15:45.10:0,45,633	0/0:20,0:20:51.55:0,52,595	0/0:17,0:17:38.80:0,39,427	0/0:13,0:13:37.73:0,38,440
chr10	51872353	.	GGT	G	220.36	PASS	AB=0.935;AC=13;AF=0.241;AN=54;BaseQRankSum=2.980;DP=611;FS=5.077;HRun=0;HaplotypeScore=114.9074;InbreedingCoeff=-0.3183;MQ=68.36;MQ0=10;MQRankSum=0.179;QD=0.75;ReadPosRankSum=0.132;VQSLOD=1.7074;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:30:8.22:0,8,36	0/1:7,0:7:22.74:23,0,49	./.	0/0:22,0:15:0.89:0,1,2	0/1:11,6:17:22.05:22,0,91	0/1:15,3:18:12.01:12,0,199	0/1:17,0:17:23.93:24,0,95	0/1:21,0:21:3.93:4,0,43	0/0:19,0:19:2.11:0,2,285	0/1:17,3:20:19.36:19,0,343	0/0:16,0:18:15.80:0,16,304	0/0:16,0:16:1.66:0,2,109	0/0:24,0:25:24.77:0,25,256	0/1:22,1:24:10.93:11,0,380	0/1:24,0:22:15.39:47,0,15	0/1:14,0:14:6.72:7,0,97	0/0:30,0:32:14.20:0,14,134	0/0:21,0:22:24.81:0,25,185	0/0:13,0:11:7.26:0,7,74	0/1:26,0:26:0.44:0,0,382	0/1:56,9:64:94.75:95,0,362	0/0:23,0:23:13.20:0,13,346	0/0:16,0:16:12.02:0,12,157	0/0:26,0:25:28:0,28,422	0/0:18,0:18:7.14:0,7,339	0/1:24,0:24:49.59:50,0,213	0/1:14,1:16:41.89:42,0,136	0/0:14,0:14:0.24:0,0,196
chr10	51872401	.	C	CGCGCGT	694.08	PASS	AB=0.978;AC=8;AF=0.143;AN=56;BaseQRankSum=4.516;DP=548;FS=0.975;HRun=0;HaplotypeScore=147.6105;InbreedingCoeff=0.6790;MQ=59.40;MQ0=7;MQRankSum=-6.468;QD=5.83;ReadPosRankSum=-2.016;VQSLOD=2.5040;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:7,22:30:2.60:69,3,0	0/0:10,0:10:26.99:0,27,400	0/1:14,0:10:0.06:0,0,128	0/1:21,0:12:29.61:30,0,162	0/0:17,0:17:42.55:0,43,837	0/0:16,0:16:36.58:0,37,751	0/0:26,0:26:78.07:0,78,1416	0/0:23,0:23:57.14:0,57,1142	0/0:17,0:17:45.14:0,45,969	0/0:28,0:28:69.24:0,69,1631	0/0:19,0:19:45.11:0,45,896	0/0:21,0:21:48.01:0,48,701	0/0:17,0:17:45.57:0,46,808	0/0:19,0:19:54.16:0,54,1162	0/0:16,0:15:39.12:0,39,617	0/0:19,0:17:39.10:0,39,618	1/1:7,19:28:21.96:409,22,0	1/1:6,14:24:9.25:318,9,0	0/0:16,0:15:35.92:0,36,624	0/0:18,0:18:45.10:0,45,887	0/0:34,0:33:75.03:0,75,1629	0/0:21,0:21:48.73:0,49,874	0/0:16,0:16:36.02:0,36,585	0/0:21,0:21:48.12:0,48,905	0/0:17,0:16:42.08:0,42,813	0/0:14,0:14:33.10:0,33,725	0/0:14,0:14:38.84:0,39,656	0/0:10,0:10:25.72:0,26,418
chr10	51875274	.	C	CTTT	1864.24	PASS	AB=0.816;AC=21;AF=0.389;AN=54;BaseQRankSum=3.289;DP=421;FS=4.073;HRun=13;HaplotypeScore=74.7828;InbreedingCoeff=0.4998;MQ=73.05;MQ0=7;MQRankSum=-6.816;QD=10.65;ReadPosRankSum=-5.253;VQSLOD=-0.4807;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:7,7:13:3.01:54,3,0	1/1:7,2:10:18.39:192,18,0	0/1:18,0:15:9.43:9,0,120	0/1:15,0:12:16.22:16,0,49	0/0:16,0:18:25.97:0,26,341	0/0:14,0:14:25.18:0,25,288	0/0:12,0:12:23.92:0,24,259	0/0:30,0:30:41.24:0,41,514	0/0:11,0:12:11.59:0,12,109	0/0:17,0:17:34.26:0,34,365	0/0:16,0:18:28.98:0,29,291	1/1:3,6:8:3.01:54,3,0	1/1:12,1:14:13.14:163,13,0	0/0:14,0:15:29.63:0,30,307	1/1:12,3:17:41.67:422,42,0	0/1:4,2:6:21.92:100,0,22	0/1:2,9:13:16.91:157,0,17	1/1:12,1:12:26.40:343,26,0	0/1:11,0:15:13.69:14,0,152	0/0:14,0:14:2.04:0,2,177	0/0:8,0:8:2.13:0,2,31	1/1:9,4:14:21.91:280,22,0	1/1:14,2:14:24.62:251,25,0	./.	0/0:30,0:30:22.75:0,23,428	0/0:22,0:20:18.36:0,18,388	0/0:11,0:13:20.90:0,21,214	0/0:17,0:16:26.96:0,27,291
chr10	51876604	.	AT	A	1620.94	PASS	AC=16;AF=0.320;AN=50;BaseQRankSum=8.156;DP=382;FS=13.892;HRun=9;HaplotypeScore=38.9344;InbreedingCoeff=0.9522;MQ=51.48;MQ0=47;MQRankSum=-4.958;QD=17.24;ReadPosRankSum=2.375;VQSLOD=2.2525;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	1/1:2,7:9:18.01:165,18,0	0/0:8,0:7:21.05:0,21,230	0/0:7,0:6:14.40:0,14,150	0/0:15,0:15:36.11:0,36,415	0/0:13,0:12:36.11:0,36,415	0/0:11,1:11:2.63:0,3,283	0/0:19,0:14:36.11:0,36,415	0/0:17,0:16:39.12:0,39,448	0/0:17,0:18:41.62:0,42,424	0/0:11,0:11:33.10:0,33,381	1/1:3,6:6:18.01:165,18,0	1/1:2,11:11:30.01:274,30,0	0/0:18,1:16:14.64:0,15,407	1/1:5,15:15:42.02:383,42,0	1/1:1,11:11:24.01:220,24,0	./.	./.	0/0:27,0:20:60.01:0,60,671	0/0:22,0:21:36.09:0,36,407	0/0:10,0:8:21.06:0,21,242	1/1:1,10:11:27.01:247,27,0	1/1:0,10:10:26.96:247,27,0	1/1:4,5:7:14.04:116,14,0	0/0:19,0:17:42.09:0,42,458	0/0:14,0:13:33.10:0,33,380	0/0:28,1:23:29.59:0,30,551	0/0:13,0:11:21.06:0,21,242
chr10	51876684	.	A	AT	778.68	PASS	AB=1.000;AC=17;AF=0.340;AN=50;BaseQRankSum=1.595;DP=282;FS=5.070;HRun=7;HaplotypeScore=31.9691;InbreedingCoeff=0.8359;MQ=58.09;MQ0=6;MQRankSum=-0.974;QD=17.70;ReadPosRankSum=0.509;VQSLOD=2.6517;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	1/1:1,1:2:6.02:71,6,0	0/0:9,0:7:17.85:0,18,166	0/1:7,0:6:3.03:3,0,37	0/0:19,0:18:42.05:0,42,401	0/0:8,0:8:18.03:0,18,173	0/0:7,0:7:18.03:0,18,173	0/0:20,0:20:54.09:0,54,521	0/0:13,0:13:30.05:0,30,289	0/0:25,0:24:72.10:0,72,691	0/0:11,0:11:27.04:0,27,260	1/1:0,3:3:9.03:107,9,0	1/1:1,2:3:8.99:92,9,0	0/0:11,0:11:27.04:0,27,258	1/1:3,3:5:12.04:143,12,0	1/1:2,4:5:9.03:109,9,0	./.	./.	0/0:22,0:20:51.03:0,51,483	0/0:19,0:19:54.08:0,54,520	0/0:4,0:3:6.01:0,6,58	1/1:1,5:6:18.06:217,18,0	1/1:3,4:7:12.04:145,12,0	1/1:2,2:4:6.02:72,6,0	0/0:11,0:11:33.05:0,33,318	0/0:19,0:19:57.09:0,57,550	0/0:17,0:16:39.03:0,39,366	0/0:18,0:17:48.08:0,48,462
chr10	51876730	.	ATTAAC	A	247.36	PASS	AC=8;AF=0.211;AN=38;BaseQRankSum=3.830;DP=253;FS=0.000;HRun=0;HaplotypeScore=29.9064;InbreedingCoeff=0.6998;MQ=29.73;MQ0=82;MQRankSum=-3.327;QD=9.89;ReadPosRankSum=0.182;VQSLOD=1.1969;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	0/0:16,0:9:24:0,24,552	0/0:5,0:5:9.03:0,9,283	0/0:9,0:6:15.05:0,15,449	0/0:23,0:10:27.09:0,27,841	0/0:11,0:8:18.06:0,18,569	0/0:17,0:10:30.09:0,30,862	0/0:10,0:4:12.04:0,12,378	1/1:2,1:1:3.01:61,3,0	1/1:4,3:3:6.02:121,6,0	0/0:11,0:7:18.03:0,18,381	1/1:1,3:2:6.02:120,6,0	./.	./.	./.	0/0:20,0:9:24.08:0,24,670	0/0:16,0:15:45.15:0,45,1290	0/0:8,0:3:6.02:0,6,190	./.	./.	1/1:10,1:3:3.01:62,3,0	0/0:2,0:1:3.01:0,3,95	0/0:18,0:9:27.09:0,27,799	0/0:16,0:11:30.10:0,30,852	0/0:19,0:15:39.13:0,39,1074
chr10	51883168	.	TC	T	1556.23	PASS	AC=6;AF=0.111;AN=54;BaseQRankSum=4.804;DP=715;FS=21.813;HRun=1;HaplotypeScore=36.9780;InbreedingCoeff=0.8695;MQ=32.40;MQ0=85;MQRankSum=2.919;QD=15.56;ReadPosRankSum=1.120;VQSLOD=1.8201;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,21:19:48.12:648,48,0	0/0:14,0:8:18.06:0,18,277	0/0:4,0:1:0.89:0,1,2	./.	0/0:50,0:22:39.13:0,39,608	0/0:27,0:12:21.07:0,21,333	0/0:20,0:10:12.04:0,12,191	0/0:36,0:2:5.96:0,6,44	0/0:22,0:16:29.91:0,30,477	0/0:36,0:19:57.19:0,57,910	0/0:28,0:17:39.06:0,39,579	0/0:18,0:11:24.08:0,24,383	0/0:23,0:18:39.13:0,39,594	0/0:16,0:11:24.08:0,24,382	0/0:26,0:17:33.06:0,33,494	0/0:17,0:13:30.10:0,30,478	1/1:13,36:26:57.19:796,57,0	1/1:5,12:10:18.06:251,18,0	0/0:10,0:3:9.03:0,9,144	0/0:49,0:30:83.94:0,84,1247	0/0:30,0:23:32.72:0,33,518	0/0:21,0:8:21.07:0,21,325	0/0:33,0:19:42.09:0,42,639	0/0:33,0:26:48.16:0,48,754	0/0:19,0:13:30.10:0,30,476	0/0:23,0:14:39.13:0,39,623	0/0:36,0:16:36.08:0,36,504	0/0:23,0:9:12.04:0,12,192
chr10	51884900	.	GA	G	682.93	PASS	AB=0.900;AC=7;AF=0.125;AN=56;BaseQRankSum=8.311;DP=539;FS=4.148;HRun=10;HaplotypeScore=60.8145;InbreedingCoeff=0.8703;MQ=68.79;MQ0=0;MQRankSum=-1.058;QD=8.03;ReadPosRankSum=2.268;VQSLOD=1.7888;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,0:32:50.13:147,50,0	0/0:12,0:12:24.06:0,24,259	0/0:7,0:7:14.77:0,15,128	0/0:13,0:13:24.05:0,24,249	0/0:45,0:45:99:0,126,1394	0/0:23,0:23:66.18:0,66,730	0/0:20,0:21:50.95:0,51,531	0/0:27,0:27:72.18:0,72,783	0/0:10,0:10:24.06:0,24,266	0/0:22,0:22:51.14:0,51,564	0/0:23,0:23:60.16:0,60,664	0/0:18,0:18:42.11:0,42,465	0/0:10,0:10:27.05:0,27,283	0/0:22,0:23:56.99:0,57,612	0/1:16,2:18:3.98:4,0,417	0/0:10,0:10:27.07:0,27,299	1/1:2,18:20:44.99:391,45,0	1/1:2,13:15:32.99:286,33,0	0/0:19,0:19:42.11:0,42,462	0/0:22,0:22:57.14:0,57,616	0/0:11,0:11:24.04:0,24,249	0/0:22,0:22:54.15:0,54,597	0/0:20,0:20:57.13:0,57,616	0/0:9,0:9:24.06:0,24,266	0/0:10,0:12:29.91:0,30,313	0/0:21,0:21:63.16:0,63,690	0/0:35,0:35:87.22:0,87,954	0/0:17,0:18:47.96:0,48,511
chr10	51885195	.	T	TA	5036.12	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-6.719;DP=578;FS=3.533;HRun=8;HaplotypeScore=69.5058;InbreedingCoeff=0.9981;MQ=80.07;MQ0=0;MQRankSum=-2.663;QD=23.21;ReadPosRankSum=4.011;VQSLOD=5.5750;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,1:27:42.67:218,43,0	1/1:0,13:13:33.10:381,33,0	0/0:16,0:16:32.35:0,32,267	0/0:16,0:16:21.53:0,22,173	0/0:37,0:37:99:0,99,900	0/0:20,0:20:57.03:0,57,522	0/0:14,0:14:38.98:0,39,346	0/0:30,0:30:81.04:0,81,741	0/0:20,0:20:54.01:0,54,490	0/0:28,0:28:72.03:0,72,659	0/0:23,0:23:66.03:0,66,604	1/1:0,10:10:30.09:346,30,0	1/1:2,13:15:30.09:346,30,0	0/0:14,0:14:39.02:0,39,357	1/1:1,28:29:84.25:969,84,0	1/1:1,23:24:69.21:797,69,0	1/1:6,1:26:42.61:216,43,0	1/1:5,0:11:19.89:101,20,0	0/0:19,0:19:51:0,51,457	0/0:25,0:25:54.01:0,54,494	0/0:8,0:8:23.99:0,24,214	1/1:4,19:23:57.17:658,57,0	1/1:3,20:23:54.05:623,54,0	1/1:4,11:15:33.10:381,33,0	0/0:21,0:21:51.02:0,51,467	0/0:26,0:26:78.04:0,78,714	0/0:25,0:25:69.04:0,69,632	0/0:19,0:19:42:0,42,384
chr10	51886651	.	GACACACACACACACACACACACAC	G	5614.56	PASS	AB=0.734;AC=14;AF=0.259;AN=54;BaseQRankSum=8.412;DP=501;FS=4.753;HRun=0;HaplotypeScore=276.9971;InbreedingCoeff=0.7117;MQ=66.66;MQ0=13;MQRankSum=-7.968;QD=51.04;ReadPosRankSum=5.425;VQSLOD=3.0245;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:36:21.07:0,21,778	1/1:1,5:6:15.05:940,15,0	0/0:30,0:18:6.02:0,6,179	./.	0/0:14,0:15:21.07:0,21,1989	0/0:20,0:23:30.10:0,30,2818	0/0:20,0:22:30.08:0,30,1886	0/0:20,0:19:21.06:0,21,992	0/0:23,0:24:33.11:0,33,2665	0/0:13,0:13:21.07:0,21,1383	0/0:12,0:13:33.11:0,33,2415	1/1:12,4:16:9.03:564,9,0	1/1:7,5:12:9.03:564,9,0	0/0:12,0:14:18.06:0,18,890	1/1:8,6:14:12.04:752,12,0	0/1:12,7:18:46.16:922,0,46	0/0:16,0:20:17.25:0,17,746	0/0:14,0:15:21.07:0,21,664	0/0:12,0:13:17.73:0,18,1015	0/0:15,0:16:27.09:0,27,2502	0/0:27,0:26:39.13:0,39,3542	1/1:8,8:16:21.07:1316,21,0	1/1:9,4:13:3.01:188,3,0	0/1:9,4:14:10.95:367,0,11	0/0:10,0:14:12.04:0,12,939	0/0:14,0:14:33.11:0,33,2911	0/0:21,0:24:52.73:0,53,4101	0/0:8,0:8:15.05:0,15,1570
chr10	51889367	.	GACAC	G	995.63	PASS	AB=0.785;AC=21;AF=0.420;AN=50;BaseQRankSum=5.344;DP=424;FS=1.826;HRun=0;HaplotypeScore=72.3766;InbreedingCoeff=0.1470;MQ=59.34;MQ0=10;MQRankSum=-0.319;QD=4.93;ReadPosRankSum=3.547;VQSLOD=1.6409;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:14,1:18:16.02:38,0,16	0/1:4,1:5:18.92:41,0,19	./.	./.	0/0:14,0:14:15.03:0,15,257	1/1:7,12:20:27.09:400,27,0	0/1:11,9:20:43.32:260,0,43	0/0:17,0:17:10.68:0,11,87	0/1:8,1:9:63.29:63,0,130	0/0:12,0:12:15.01:0,15,274	0/0:14,0:14:18.02:0,18,371	1/1:4,0:8:6.01:56,6,0	1/1:3,0:7:9.01:84,9,0	0/1:5,1:7:32:32,0,166	0/1:0,1:6:32.80:33,0,35	0/0:4,0:6:8.49:0,8,50	0/1:14,0:24:16.07:22,0,16	1/1:11,0:16:6.01:56,6,0	./.	0/0:12,0:12:12:0,12,212	0/0:12,0:12:12.51:0,13,244	1/1:7,0:10:3:28,3,0	1/1:7,0:15:4.66:34,5,0	0/1:19,0:19:4.93:5,0,27	0/0:18,0:19:17.80:0,18,366	0/1:14,1:15:10.70:11,0,629	0/0:13,0:12:15.05:0,15,322	0/0:3,0:4:8.76:0,9,126
chr10	51889828	.	TTG	T	541.72	PASS	AB=0.924;AC=12;AF=0.214;AN=56;BaseQRankSum=5.430;DP=742;FS=2.784;HRun=0;HaplotypeScore=117.1837;InbreedingCoeff=-0.1428;MQ=58.00;MQ0=7;MQRankSum=0.714;QD=1.71;ReadPosRankSum=1.204;VQSLOD=2.1611;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:36:2.44:0,2,25	0/0:4,0:5:3:0,3,26	0/0:46,0:18:6.02:0,6,78	0/0:41,0:17:11.29:0,11,95	0/1:24,4:28:31.45:31,0,599	0/1:19,0:19:31.34:31,0,457	0/0:35,2:36:7.63:0,8,1040	0/1:38,2:40:36.23:36,0,585	0/0:22,0:22:50.37:0,50,734	0/1:17,2:19:34.67:35,0,379	0/0:15,0:15:33.11:0,33,507	0/1:9,1:20:16.26:16,0,91	0/0:6,0:15:11.97:0,12,99	1/1:3,15:20:35.77:381,36,0	0/0:10,0:20:5.22:0,5,33	0/0:4,0:21:6:0,6,52	0/0:44,1:45:48.89:0,49,1240	0/1:17,1:18:24.01:24,0,379	0/1:17,2:19:65.93:66,0,210	0/1:18,3:21:28.18:28,0,521	0/1:83,3:83:32.69:33,0,1612	0/0:8,0:15:6:0,6,51	0/0:6,0:7:5.73:0,6,56	0/0:19,0:23:12.81:0,13,140	0/1:22,3:25:10.51:11,0,760	0/0:26,0:26:51.17:0,51,803	0/0:32,0:32:61.04:0,61,1026	0/0:16,1:17:12.42:0,12,606
chr10	51889882	.	AGT	A	840.59	PASS	AB=0.977;AC=17;AF=0.304;AN=56;BaseQRankSum=1.726;DP=644;FS=1.297;HRun=0;HaplotypeScore=125.5168;InbreedingCoeff=-0.0381;MQ=60.89;MQ0=5;MQRankSum=1.426;QD=2.13;ReadPosRankSum=0.956;VQSLOD=2.3659;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:31:26.69:0,27,229	0/1:7,0:7:0:0,0,0	0/0:32,0:21:3.44:0,3,47	0/1:39,0:24:0.53:1,0,4	0/0:34,0:34:39.69:0,40,668	0/0:13,0:13:14.84:0,15,195	0/1:25,2:27:56.89:57,0,403	0/1:27,0:27:4.14:4,0,235	0/1:21,1:22:30.45:30,0,242	0/0:14,0:14:18.05:0,18,245	0/0:11,0:11:21.07:0,21,315	0/1:28,0:28:22.64:23,0,43	0/0:18,0:17:3.44:0,3,21	0/1:15,1:16:22.01:22,0,124	0/0:17,0:16:0:0,0,0	0/1:20,0:20:13.38:27,0,13	1/1:17,24:44:4.38:439,4,0	1/1:9,10:19:16.02:151,16,0	0/1:28,1:29:63.05:63,0,318	0/0:8,0:8:3.01:0,3,35	0/1:63,3:63:99:126,0,595	0/0:12,0:11:6.01:0,6,63	0/1:11,0:11:0:0,0,0	0/0:25,0:25:2.79:0,3,21	0/1:21,0:22:5.19:5,0,407	0/0:22,0:22:5.05:0,5,486	0/1:16,1:17:34.43:34,0,252	0/0:13,0:13:21.07:0,21,309
chr10	51891616	.	TA	T	5289.66	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=13.415;DP=650;FS=9.248;HRun=6;HaplotypeScore=62.0932;InbreedingCoeff=0.9832;MQ=83.69;MQ0=0;MQRankSum=-1.360;QD=27.99;ReadPosRankSum=3.884;VQSLOD=5.2417;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,25:28:72.18:774,72,0	1/1:0,11:11:33.08:355,33,0	0/0:21,0:19:33.10:0,33,408	0/0:20,0:20:51.05:0,51,608	0/0:35,0:35:99:0,102,1342	0/0:30,0:30:81.26:0,81,1053	0/0:11,0:11:30.07:0,30,365	0/0:25,0:25:60.19:0,60,776	0/0:29,0:29:87.27:0,87,1131	0/0:42,0:42:99:0,117,1491	0/0:26,0:26:72.21:0,72,919	1/1:1,16:17:48.12:516,48,0	1/1:3,17:20:45.11:483,45,0	0/0:22,0:22:63.17:0,63,786	1/1:0,19:19:57.14:612,57,0	1/1:0,25:25:60.15:645,60,0	0/0:22,0:22:66.21:0,66,868	0/0:8,0:8:24.04:0,24,296	0/0:21,0:21:60.14:0,60,745	0/0:34,0:34:99:0,99,1269	0/0:18,0:18:54.15:0,54,683	1/1:1,19:20:54.01:552,54,0	1/1:2,19:21:51.13:547,51,0	1/1:0,28:28:75.19:806,75,0	0/0:27,0:27:72.22:0,72,920	0/0:37,0:37:99:0,111,1447	0/0:31,0:29:87.28:0,87,1135	0/0:2,0:2:6.02:0,6,79
chr10	51893746	.	AACACACACACACAC	A	2995.35	PASS	AB=0.632;AC=11;AF=0.229;AN=48;BaseQRankSum=7.046;DP=547;FS=9.001;HRun=0;HaplotypeScore=204.5013;InbreedingCoeff=0.8083;MQ=68.81;MQ0=9;MQRankSum=-6.911;QD=23.96;ReadPosRankSum=1.709;VQSLOD=1.3906;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:42:21.04:0,21,843	1/1:8,0:14:15.05:488,15,0	./.	./.	0/0:7,0:8:9.03:0,9,506	0/0:11,0:12:21.05:0,21,1117	0/0:31,0:33:42.13:0,42,2311	0/0:17,0:17:15.04:0,15,504	0/0:12,0:12:21.07:0,21,1044	0/0:20,0:20:36.09:0,36,1517	0/0:13,0:14:18.06:0,18,920	1/1:12,11:23:21.07:792,21,0	0/1:10,12:24:9.36:1135,0,9	0/0:17,0:18:24.08:0,24,1348	1/1:13,0:17:9.03:272,9,0	1/1:9,0:18:11.71:373,12,0	0/0:13,0:18:21.54:0,22,1137	0/0:14,0:23:18.06:0,18,884	0/0:12,0:15:18.06:0,18,691	0/0:5,0:10:9.03:0,9,483	0/0:33,0:32:39.13:0,39,1683	./.	./.	1/1:27,1:28:8.97:96,9,0	0/0:20,0:24:33.11:0,33,1563	0/0:15,0:14:27.05:0,27,1297	0/0:6,0:8:12.03:0,12,265	0/0:8,0:8:15.05:0,15,586
chr10	51895447	.	GCA	G	1797.41	PASS	AB=0.885;AC=18;AF=0.346;AN=52;BaseQRankSum=3.124;DP=595;FS=0.495;HRun=0;HaplotypeScore=90.0799;InbreedingCoeff=0.1200;MQ=55.85;MQ0=13;MQRankSum=2.513;QD=5.41;ReadPosRankSum=1.676;VQSLOD=2.9012;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:34,1:35:24.77:295,0,25	./.	0/0:23,0:5:3.01:0,3,47	0/0:34,1:11:2.60:0,3,10	0/0:13,0:13:6.58:0,7,324	0/1:19,0:19:3.32:3,0,357	0/1:24,0:24:46.96:47,0,352	0/1:20,0:20:0.52:1,0,380	0/0:23,0:22:16.14:0,16,569	0/1:23,0:23:53.34:53,0,538	0/1:18,0:18:25.20:25,0,367	1/1:19,5:23:42.15:465,42,0	0/1:8,15:23:6.19:88,0,6	0/0:16,0:16:29.67:0,30,387	1/1:15,2:16:36.09:423,36,0	1/1:21,3:23:29.66:319,30,0	0/1:11,15:26:30.37:30,0,42	0/1:9,0:9:8.14:196,0,8	0/0:23,0:22:36.10:0,36,481	0/0:24,0:24:10.91:0,11,550	0/0:35,0:33:49.96:0,50,623	./.	0/1:9,1:10:0.10:0,0,0	0/1:17,23:39:0:0,0,0	0/0:21,1:22:37.59:0,38,509	0/0:23,0:22:4.99:0,5,653	0/1:17,3:20:3.88:4,0,334	0/0:7,0:6:12.04:0,12,187
chr10	51895460	.	CACACAT	C	1107.28	PASS	AB=1.000;AC=16;AF=0.296;AN=54;BaseQRankSum=8.604;DP=578;FS=3.478;HRun=0;HaplotypeScore=127.0025;InbreedingCoeff=0.4769;MQ=54.63;MQ0=10;MQRankSum=1.468;QD=4.28;ReadPosRankSum=-2.034;VQSLOD=2.1774;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:36,0:36:99:101,0,140	0/0:6,0:6:1.64:0,2,11	0/0:10,0:2:3:0,3,26	./.	0/0:13,0:13:6.10:0,6,374	0/0:20,0:20:30.18:0,30,642	0/0:23,0:23:6.37:0,6,490	0/0:16,0:16:17.77:0,18,274	0/0:22,0:21:45.92:0,46,754	0/0:21,0:21:41.79:0,42,735	0/0:20,0:20:5.11:0,5,507	1/1:30,0:29:45.58:469,46,0	1/1:25,0:25:28.34:295,28,0	0/0:16,0:16:33.05:0,33,611	1/1:22,0:21:20.98:137,21,0	1/1:26,0:25:12.01:85,12,0	0/1:26,0:26:29.81:30,0,117	0/1:11,0:11:14.95:15,0,173	0/0:18,0:17:35.80:0,36,383	0/0:20,0:20:37.79:0,38,772	0/0:36,0:34:20.67:0,21,529	1/1:15,0:15:5.35:46,5,0	0/0:1,7:8:0:0,0,1	1/1:40,0:39:12.86:88,13,0	0/0:24,0:24:35.59:0,36,869	0/1:28,0:27:18.41:18,0,570	0/0:16,0:16:6.76:0,7,372	0/0:7,0:6:8.29:0,8,354
chr10	51895464	.	CAT	C	1301.97	PASS	AB=1.000;AC=26;AF=0.481;AN=54;BaseQRankSum=10.742;DP=573;FS=11.486;HRun=0;HaplotypeScore=94.5161;InbreedingCoeff=0.2870;MQ=53.75;MQ0=9;MQRankSum=2.019;QD=3.22;ReadPosRankSum=-1.464;VQSLOD=0.8023;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:39,0:39:23.70:207,24,0	1/1:8,0:8:10.36:57,10,0	0/0:6,0:1:3:0,3,26	./.	0/1:14,0:14:41.49:41,0,241	0/0:22,0:22:13.58:0,14,380	0/1:22,0:22:3.70:4,0,325	0/1:19,0:19:3.46:3,0,266	0/0:21,0:20:24.79:0,25,406	0/1:20,0:20:0.31:0,0,344	0/0:20,0:20:8.11:0,8,344	1/1:31,0:30:45.61:250,46,0	1/1:25,0:25:27.16:192,27,0	0/0:13,4:17:29.34:0,29,317	1/1:22,0:21:30.08:138,30,0	1/1:26,0:25:28.04:159,28,0	0/1:25,0:25:19.91:65,0,20	0/1:11,0:11:10.68:98,0,11	0/0:16,0:15:24.85:0,25,302	0/0:19,0:19:1.17:0,1,401	0/1:35,0:33:8.69:9,0,360	1/1:15,0:15:5.84:45,6,0	0/1:8,0:8:0.10:0,0,0	1/1:37,0:36:14.78:107,15,0	0/0:22,0:22:7.46:0,7,491	0/1:30,0:29:78.39:78,0,372	0/1:17,0:17:23.24:23,0,222	0/0:7,0:6:8.26:0,8,193
chr10	51895466	.	TAC	T	433.31	PASS	AB=0.970;AC=23;AF=0.411;AN=56;BaseQRankSum=4.694;DP=573;FS=0.666;HRun=0;HaplotypeScore=98.0314;InbreedingCoeff=0.0947;MQ=53.74;MQ0=9;MQRankSum=0.818;QD=1.28;ReadPosRankSum=-0.853;VQSLOD=1.3347;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:21.94:0,22,199	1/1:8,0:8:4.64:88,5,0	0/0:9,0:3:5.91:0,6,39	0/0:16,0:2:2.99:0,3,24	0/0:14,0:14:3.01:0,3,131	0/0:22,0:22:31.62:0,32,400	0/0:23,0:23:24.81:0,25,297	0/1:22,0:22:28.67:29,0,110	0/1:18,1:18:6.42:6,0,242	0/1:21,0:21:14.29:14,0,189	0/1:19,1:20:12.10:12,0,221	1/1:14,0:30:13.94:63,14,0	0/1:23,0:25:12.71:14,0,13	0/0:17,0:17:18.01:0,18,210	1/1:11,9:19:6.46:67,6,0	1/1:8,17:24:14.74:126,15,0	0/0:25,0:25:16.13:0,16,132	0/0:11,0:11:9.95:0,10,81	0/1:15,0:14:14.71:15,0,87	0/1:18,0:19:45.71:46,0,163	0/0:34,0:32:22.82:0,23,243	1/1:12,0:15:2.74:12,3,0	0/1:7,0:8:0.10:0,0,0	1/1:34,0:36:13.10:53,13,0	0/0:21,0:21:0.38:0,0,432	0/1:30,0:29:19.52:20,0,150	0/1:17,0:17:19.75:20,0,111	0/1:7,0:6:18.21:18,0,139
chr10	51896111	.	G	GA	3925.04	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-13.560;DP=463;FS=2.411;HRun=6;HaplotypeScore=44.4391;InbreedingCoeff=0.9908;MQ=73.30;MQ0=0;MQRankSum=-1.639;QD=32.17;ReadPosRankSum=3.142;VQSLOD=3.8299;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,22:24:63.20:793,63,0	1/1:0,6:6:18.06:226,18,0	0/0:21,1:21:20.80:0,21,473	0/0:14,0:14:33.06:0,33,330	0/0:21,0:21:54.10:0,54,543	0/0:15,0:15:36.08:0,36,367	0/0:4,0:4:12.01:0,12,116	0/0:37,0:37:99:0,111,1113	0/0:19,0:19:57.13:0,57,582	0/0:23,0:23:69.16:0,69,703	0/0:20,0:20:54.12:0,54,551	1/1:2,17:19:51.16:642,51,0	1/1:0,11:11:33.11:415,33,0	0/0:8,0:8:24.05:0,24,245	1/1:2,9:11:24.08:302,24,0	1/1:1,9:10:24.08:302,24,0	0/0:33,0:33:90.21:0,90,918	0/0:16,0:16:45.10:0,45,459	0/0:20,0:20:57.13:0,57,582	0/0:20,0:20:60.14:0,60,612	0/0:10,0:10:30.05:0,30,299	1/1:1,8:8:21.07:264,21,0	1/1:1,17:18:42.13:528,42,0	1/1:2,12:14:36.12:453,36,0	0/0:14,0:14:42.10:0,42,428	0/0:17,0:17:48.09:0,48,482	0/0:21,0:21:60.12:0,60,604	0/0:7,0:7:21.05:0,21,214
chr10	51896328	.	GA	G	216.11	PASS	AB=0.917;AC=4;AF=0.071;AN=56;BaseQRankSum=5.508;DP=439;FS=1.990;HRun=10;HaplotypeScore=47.2866;InbreedingCoeff=0.4656;MQ=68.94;MQ0=0;MQRankSum=0.323;QD=6.36;ReadPosRankSum=-1.387;VQSLOD=0.5192;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,13:16:35.94:305,36,0	0/0:9,0:9:3.53:0,4,182	0/0:13,1:13:20.48:0,20,188	0/1:13,0:13:2.26:2,0,76	0/0:18,0:19:53.98:0,54,578	0/0:15,0:14:39.11:0,39,431	0/0:10,0:10:30.08:0,30,332	0/0:28,0:28:63.16:0,63,690	0/0:11,0:11:30.07:0,30,322	0/0:19,0:19:51.13:0,51,558	0/0:19,1:19:16.05:0,16,389	0/0:11,0:11:33.09:0,33,365	0/0:12,0:12:24.06:0,24,258	0/0:8,0:8:21.06:0,21,232	0/0:13,0:14:41.93:0,42,438	0/0:9,0:9:24.06:0,24,258	0/0:30,0:30:87.22:0,87,953	0/0:20,0:20:59.62:0,60,622	0/0:23,0:23:69.01:0,69,716	0/0:18,0:18:48.12:0,48,524	0/1:4,1:5:14.02:14,0,88	0/0:19,0:19:42.06:0,42,450	0/0:20,0:20:54.09:0,54,574	0/0:8,0:8:21.06:0,21,232	0/0:16,0:17:38.94:0,39,412	0/0:17,0:17:51.14:0,51,564	0/0:26,1:27:46.24:0,46,737	0/0:7,0:7:18.05:0,18,199
chr10	51896884	.	T	TAA	3705.35	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=6.296;DP=389;FS=6.778;HRun=11;HaplotypeScore=54.6113;InbreedingCoeff=0.9082;MQ=61.79;MQ0=5;MQRankSum=0.533;QD=19.81;ReadPosRankSum=1.454;VQSLOD=2.3158;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,24:28:36.37:640,36,0	1/1:1,5:7:12.03:158,12,0	0/0:13,0:5:5.93:0,6,42	0/0:8,0:6:8.97:0,9,85	0/0:22,0:23:56.78:0,57,529	1/1:3,0:11:17.47:60,17,0	1/1:2,0:12:17.47:60,17,0	0/0:23,0:23:4.31:0,4,406	0/0:10,0:10:27.02:0,27,256	0/0:10,0:10:27.04:0,27,262	0/0:18,0:18:38.95:0,39,368	1/1:3,12:15:30.10:435,30,0	1/1:2,11:14:20.91:304,21,0	0/0:10,0:10:27.01:0,27,254	1/1:2,8:10:18.04:241,18,0	1/1:3,15:18:33.07:454,33,0	1/1:1,1:16:32.95:146,33,0	1/1:4,0:18:38.17:146,38,0	0/0:15,0:14:30:0,30,291	0/0:15,0:15:33:0,33,320	0/0:7,0:7:14.99:0,15,145	1/1:5,10:17:36.03:455,36,0	1/1:7,11:18:39.06:519,39,0	1/1:0,2:2:6.02:87,6,0	0/0:19,0:20:50.78:0,51,477	0/0:13,0:12:26.98:0,27,257	0/0:13,0:13:36.06:0,36,349	0/0:2,0:2:2.99:0,3,29
chr10	51897598	.	TA	T	7755.74	PASS	AB=0.538;AC=17;AF=0.304;AN=56;BaseQRankSum=14.653;DP=709;FS=0.303;HRun=2;HaplotypeScore=70.9414;InbreedingCoeff=0.9158;MQ=84.50;MQ0=0;MQRankSum=-6.405;QD=34.17;ReadPosRankSum=3.609;VQSLOD=5.0762;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,35:35:96.31:1240,96,0	0/1:1,6:7:23.81:213,0,24	0/0:23,0:23:66.22:0,66,973	0/0:21,0:21:34.99:0,35,694	0/0:27,0:27:78.26:0,78,1167	0/0:32,0:32:96.29:0,96,1375	0/0:24,0:24:72.24:0,72,1078	0/0:29,0:29:81.27:0,81,1195	0/0:22,0:22:63.21:0,63,944	0/0:28,0:28:84.27:0,84,1225	0/0:18,1:19:54.18:0,54,809	1/1:0,19:19:54.18:701,54,0	1/1:0,30:30:81.26:1052,81,0	0/0:24,0:24:69.22:0,69,1010	1/1:0,24:24:63.20:818,63,0	1/1:1,24:25:60.19:779,60,0	0/0:19,0:19:57.19:0,57,852	0/0:13,0:13:36.08:0,36,514	0/0:26,0:26:69.21:0,69,1012	0/0:35,0:35:99:0,102,1489	0/0:34,0:34:99:0,99,1462	1/1:0,31:31:81.26:1048,81,0	1/1:1,35:36:96.31:1246,96,0	1/1:1,19:20:51.16:658,51,0	0/0:18,0:18:54.17:0,54,787	0/0:43,0:43:99:0,123,1818	0/0:29,0:29:84.28:0,84,1255	0/0:16,0:16:48.16:0,48,714
chr10	51898256	.	CA	C	4767.54	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=15.286;DP=641;FS=7.715;HRun=9;HaplotypeScore=77.7562;InbreedingCoeff=0.9828;MQ=74.29;MQ0=1;MQRankSum=-0.988;QD=22.49;ReadPosRankSum=4.371;VQSLOD=5.4937;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,26:28:72.04:658,72,0	1/1:1,11:12:20.80:192,21,0	0/0:32,1:26:10.89:0,11,450	0/0:27,0:23:31.48:0,31,297	0/0:36,0:36:96.76:0,97,1109	0/0:14,1:15:8.64:0,9,352	0/0:14,0:14:36.10:0,36,412	0/0:45,0:45:99:0,117,1350	0/0:24,0:24:69.20:0,69,796	0/0:28,0:28:66.19:0,66,755	0/0:20,0:20:60.16:0,60,680	1/1:2,29:31:78.03:714,78,0	1/1:3,18:21:48.02:439,48,0	0/0:18,0:18:51.15:0,51,588	1/1:2,7:9:21.01:192,21,0	1/1:0,14:14:39.02:357,39,0	0/0:37,0:37:99:0,105,1197	0/0:15,0:15:39.12:0,39,450	0/0:24,0:24:57.17:0,57,658	0/0:22,0:22:63.19:0,63,726	0/0:7,0:7:21.06:0,21,242	1/1:4,16:20:45.01:410,45,0	1/1:1,28:29:81.04:741,81,0	1/1:1,16:17:45.02:412,45,0	0/0:24,0:24:69.20:0,69,796	0/0:27,0:27:72.21:0,72,830	1/1:4,27:31:43.42:652,43,0	0/0:13,0:13:30.06:0,30,332
chr10	51898509	.	A	AT	3977.99	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-12.618;DP=527;FS=12.517;HRun=8;HaplotypeScore=49.0150;InbreedingCoeff=0.9912;MQ=81.43;MQ0=0;MQRankSum=-0.624;QD=30.60;ReadPosRankSum=0.589;VQSLOD=2.5772;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,17:17:51.15:588,51,0	1/1:0,5:5:14.96:155,15,0	0/0:22,0:22:44.75:0,45,396	0/0:7,0:7:17.98:0,18,157	0/0:26,0:26:72.03:0,72,659	0/0:20,0:20:60.03:0,60,549	0/0:15,0:15:36.01:0,36,329	0/0:39,0:39:99:0,108,977	0/0:21,0:21:60.01:0,60,541	0/0:33,0:33:84.03:0,84,769	0/0:16,0:16:44.95:0,45,402	1/1:1,12:13:33.10:381,33,0	1/1:2,13:15:39.12:449,39,0	0/0:15,0:15:30:0,30,275	1/1:1,17:18:42.12:485,42,0	1/1:1,16:17:45.13:519,45,0	0/0:20,0:20:57.03:0,57,522	0/0:13,0:13:36.02:0,36,329	0/0:28,0:28:69.03:0,69,632	0/0:25,0:25:75.04:0,75,686	0/0:11,0:11:26.97:0,27,240	1/1:0,16:16:48.10:539,48,0	1/1:2,16:18:20.68:492,21,0	1/1:1,10:11:33.08:370,33,0	0/0:18,1:19:13.40:0,13,377	0/0:33,0:33:81.03:0,81,739	0/0:24,0:24:69.04:0,69,632	0/0:10,0:10:24:0,24,220
chr10	51899080	.	T	TA	1119.76	PASS	AB=0.780;AC=17;AF=0.304;AN=56;BaseQRankSum=-3.722;DP=526;FS=7.931;HRun=15;HaplotypeScore=71.8835;InbreedingCoeff=0.4212;MQ=70.49;MQ0=2;MQRankSum=1.371;QD=5.33;ReadPosRankSum=-0.292;VQSLOD=2.0049;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:24:33.41:0,33,96	0/1:2,2:4:9.01:41,0,9	0/0:16,0:14:9.20:0,9,46	0/0:6,0:5:5.80:0,6,36	0/0:32,1:37:17.74:0,18,203	0/1:13,2:19:14.85:15,0,126	0/1:9,1:11:4.70:5,0,87	0/0:32,1:34:24.31:0,24,205	0/0:18,0:18:27.37:0,27,174	0/1:17,6:24:51.91:72,0,52	0/0:19,1:21:5.01:0,5,126	1/1:5,13:18:20.94:170,21,0	0/1:5,14:20:0.07:101,0,0	0/0:12,0:12:17.52:0,18,107	1/1:5,11:16:20.98:176,21,0	0/1:7,12:21:6.37:150,0,6	0/0:2,0:11:14.02:0,14,41	0/0:5,0:9:10.81:0,11,41	0/0:17,1:21:13.28:0,13,171	0/0:20,0:20:32.14:0,32,197	0/0:15,0:15:23.35:0,23,143	1/1:6,11:19:11.62:176,12,0	1/1:13,18:31:4.75:243,5,0	1/1:3,8:12:14.98:126,15,0	0/1:11,0:14:21.71:22,0,77	0/0:28,0:29:39.90:0,40,239	0/0:22,0:24:36.94:0,37,220	0/0:18,0:18:17.74:0,18,199
chr10	51902714	.	AGCT	A	4389.68	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=13.275;DP=518;FS=5.403;HRun=0;HaplotypeScore=82.3391;InbreedingCoeff=0.9885;MQ=75.97;MQ0=0;MQRankSum=-1.613;QD=48.77;ReadPosRankSum=2.669;VQSLOD=7.2411;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,28:29:81.27:1428,81,0	1/1:0,16:16:41.63:740,42,0	0/0:12,0:12:36.12:0,36,830	0/0:12,0:11:24.39:0,24,594	0/0:19,0:19:54.19:0,54,1252	0/0:16,0:16:48.16:0,48,1113	0/0:17,0:17:45.15:0,45,1059	0/0:16,0:16:48.16:0,48,1137	0/0:26,0:26:19.31:0,19,1579	0/0:15,0:15:35.33:0,35,934	0/0:9,0:9:24.08:0,24,568	0/0:20,0:20:60.21:0,60,1398	0/0:27,0:27:81.28:0,81,1887	0/0:28,0:28:84.29:0,84,1978	1/1:0,24:24:69.24:1217,69,0	1/1:0,21:21:57.20:1005,57,0	0/0:26,0:26:76.81:0,77,1778	0/0:12,0:12:33.09:0,33,729	0/0:21,0:21:60.21:0,60,1363	0/0:18,0:18:51.18:0,51,1185	0/0:30,0:30:87.28:0,87,1987	0/0:16,0:16:45.15:0,45,1043	0/0:12,0:12:36.12:0,36,848	0/0:19,0:19:57.20:0,57,1348	0/0:15,0:15:45.15:0,45,1062	0/0:16,0:16:48.16:0,48,1135	0/0:22,0:22:66.23:0,66,1558	0/0:4,0:4:12.04:0,12,261
chr10	51905002	.	A	AAG	792.64	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=0.689;DP=442;FS=6.995;HRun=0;HaplotypeScore=84.1995;InbreedingCoeff=0.8271;MQ=55.25;MQ0=1;MQRankSum=1.782;QD=10.86;ReadPosRankSum=3.388;VQSLOD=2.5621;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:31:80.01:0,80,658	0/0:5,0:5:14.13:0,14,94	0/0:14,0:5:11.85:0,12,104	0/1:11,0:5:13.58:14,0,40	0/0:30,0:30:75.16:0,75,638	0/0:16,0:16:41.06:0,41,352	0/0:8,0:8:20.93:0,21,201	0/0:32,0:31:82.59:0,83,691	0/0:12,0:12:32.89:0,33,291	0/0:21,0:21:56.87:0,57,516	0/0:12,0:12:26.78:0,27,240	1/1:1,13:15:11.93:128,12,0	1/1:3,7:11:14.72:143,15,0	0/0:13,0:13:37.76:0,38,335	0/0:21,0:20:45.53:0,46,317	0/0:14,0:13:33.84:0,34,223	0/0:20,0:20:51.72:0,52,413	0/0:15,0:15:32.66:0,33,236	0/0:12,0:12:29.96:0,30,274	0/0:18,0:18:44.14:0,44,393	0/0:4,0:4:8.98:0,9,82	1/1:1,8:8:17.76:164,18,0	1/1:1,16:17:24.10:392,24,0	1/1:3,6:10:5.91:120,6,0	0/0:25,0:25:67.94:0,68,526	0/0:13,0:13:32.97:0,33,308	0/0:25,0:25:60.95:0,61,531	0/0:7,0:7:17.88:0,18,147
chr10	51905260	.	A	ATGTG	8770.80	PASS	AB=1.000;AC=41;AF=0.732;AN=56;BaseQRankSum=-4.112;DP=537;FS=4.880;HRun=0;HaplotypeScore=99.9537;InbreedingCoeff=0.7700;MQ=56.87;MQ0=7;MQRankSum=-0.531;QD=21.24;ReadPosRankSum=-1.112;VQSLOD=4.2527;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:26:6.02:86,6,0	1/1:3,2:5:6.02:116,6,0	0/1:22,0:12:3.95:18,0,4	0/0:21,0:10:6.51:0,7,67	0/0:19,0:22:27.06:0,27,370	1/1:3,13:16:21.07:505,21,0	1/1:9,6:18:14.79:301,15,0	1/1:30,0:29:14.93:232,15,0	1/1:10,1:20:13.05:355,13,0	1/1:6,11:20:39.09:818,39,0	1/1:8,6:16:1.54:275,2,0	0/0:23,0:23:36.09:0,36,531	0/0:18,0:17:39.11:0,39,600	1/1:7,3:13:5.75:84,6,0	1/1:9,10:20:33.11:793,33,0	1/1:5,7:16:17.52:371,18,0	1/1:8,0:16:18.06:352,18,0	1/1:5,0:7:9.03:164,9,0	1/1:8,6:14:24.08:488,24,0	1/1:6,12:21:18.06:433,18,0	1/1:15,14:32:24.08:559,24,0	0/0:4,0:4:6.02:0,6,96	0/0:14,0:14:24.06:0,24,361	0/0:22,0:22:36.11:0,36,553	1/1:7,25:31:54.19:1279,54,0	1/1:12,9:22:28.73:626,29,0	1/1:12,16:32:41.18:830,41,0	1/1:4,1:8:5.75:84,6,0
chr10	51905848	.	T	TACAC	1393.83	PASS	AB=0.806;AC=20;AF=0.357;AN=56;BaseQRankSum=10.379;DP=567;FS=21.589;HRun=0;HaplotypeScore=133.5618;InbreedingCoeff=0.5951;MQ=63.60;MQ0=5;MQRankSum=0.720;QD=5.86;ReadPosRankSum=0.290;VQSLOD=0.5859;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:40,0:42:54.82:55,0,823	1/1:3,0:3:3:25,3,0	0/0:24,0:16:9.01:0,9,111	0/0:24,0:21:12.03:0,12,139	0/0:18,0:21:23.58:0,24,490	0/0:19,0:19:36.12:0,36,578	0/0:18,0:21:42.06:0,42,514	0/0:30,0:31:29.56:0,30,549	0/0:14,0:14:27.04:0,27,358	0/0:16,0:16:24.08:0,24,383	0/0:15,0:15:6.08:0,6,360	1/1:5,0:17:21.96:98,22,0	0/1:8,0:29:47.36:146,0,47	0/0:20,0:20:44.24:0,44,653	1/1:22,0:22:18.03:273,18,0	1/1:16,0:17:15:228,15,0	1/1:17,0:21:18.06:326,18,0	1/1:8,3:19:12.04:209,12,0	0/0:13,0:15:2.49:0,2,160	0/0:17,0:16:17.63:0,18,227	0/0:18,0:18:39.04:0,39,564	1/1:4,0:14:24.70:111,25,0	1/1:11,0:19:11.14:53,11,0	0/1:8,0:18:57.43:57,0,88	0/0:15,0:15:17.66:0,18,309	0/0:25,0:28:21.91:0,22,537	0/0:28,0:28:72.15:0,72,1042	0/1:15,0:15:9.85:10,0,338
chr10	51909579	.	C	CT	7341.20	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=-15.095;DP=694;FS=6.737;HRun=8;HaplotypeScore=64.3506;InbreedingCoeff=0.9078;MQ=69.52;MQ0=1;MQRankSum=-0.525;QD=24.89;ReadPosRankSum=5.605;VQSLOD=5.2788;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:3,26:29:72.21:831,72,0	1/1:4,12:16:11.65:388,12,0	0/0:21,0:16:6.21:0,6,213	0/0:25,0:17:32.73:0,33,278	0/0:29,0:29:75.01:0,75,681	0/0:22,0:22:57.03:0,57,522	0/0:37,0:37:46.88:0,47,842	0/0:32,0:31:56.96:0,57,521	0/0:21,0:21:51.02:0,51,467	0/0:24,0:24:54:0,54,484	0/0:19,0:19:42:0,42,384	1/1:3,17:20:48.14:554,48,0	1/1:3,24:27:63.18:724,63,0	0/0:24,0:24:59.92:0,60,538	1/1:7,24:31:35.72:665,36,0	1/1:4,22:26:60.18:692,60,0	1/1:4,23:27:57.17:658,57,0	1/1:9,27:36:67.33:793,67,0	0/0:25,0:25:60:0,60,541	0/0:26,0:26:68.60:0,69,621	0/0:26,0:26:41.53:0,42,551	1/1:1,17:17:42.12:485,42,0	1/1:1,9:10:27.08:312,27,0	1/1:5,44:49:84:1219,84,0	0/0:15,0:15:36.01:0,36,330	0/0:32,0:32:81.03:0,81,740	0/0:20,0:20:51:0,51,461	0/1:6,0:6:20.21:20,0,61
chr10	51910189	.	ATGATCGTGGGG	A	2433.60	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.328;DP=654;FS=3.749;HRun=0;HaplotypeScore=197.6942;InbreedingCoeff=0.9881;MQ=85.73;MQ0=0;MQRankSum=-8.380;QD=49.67;ReadPosRankSum=-0.562;VQSLOD=3.3760;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,19:22:39.13:1304,39,0	0/0:23,0:23:63.22:0,63,3483	0/0:19,0:19:54.17:0,54,2391	0/0:24,0:24:66.19:0,66,3082	0/0:26,0:26:78.25:0,78,3958	0/0:18,0:18:54.19:0,54,2981	0/0:20,0:20:57.20:0,57,3141	0/0:29,0:29:81.28:0,81,4091	0/0:17,0:17:51.16:0,51,2708	0/0:36,0:36:99:0,105,5422	0/0:21,0:21:63.22:0,63,3486	0/0:27,0:27:72.25:0,72,4030	0/0:29,0:29:87.30:0,87,4634	0/0:20,0:20:54.19:0,54,3093	0/0:27,0:27:81.28:0,81,4226	0/0:30,0:30:87.30:0,87,4450	1/1:0,10:10:24.08:845,24,0	1/1:5,12:17:12.04:423,12,0	0/0:18,0:18:51.17:0,51,2150	0/0:25,0:25:75.26:0,75,4013	0/0:15,0:15:45.15:0,45,2429	0/0:30,0:30:84.29:0,84,4327	0/0:24,0:24:72.25:0,72,3916	0/0:17,0:17:51.18:0,51,2876	0/0:26,0:26:75.26:0,75,4127	0/0:33,0:33:96.30:0,96,4468	0/0:38,0:38:99:0,111,6119	0/0:13,0:13:39.13:0,39,2233
chr10	51912271	.	T	TA	1283.11	PASS	AB=0.839;AC=12;AF=0.214;AN=56;BaseQRankSum=-3.394;DP=551;FS=1.673;HRun=12;HaplotypeScore=73.2731;InbreedingCoeff=0.5102;MQ=74.75;MQ0=0;MQRankSum=0.631;QD=10.35;ReadPosRankSum=-0.258;VQSLOD=3.0985;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:25:39:0,39,270	0/0:2,0:5:5.60:0,6,17	0/1:12,0:13:4.01:4,0,67	0/1:14,0:14:1.06:1,0,65	0/0:19,1:25:7.17:0,7,190	0/0:17,1:19:11.60:0,12,239	0/0:21,0:22:49.66:0,50,352	0/0:25,0:28:60.69:0,61,425	0/0:14,0:14:38.78:0,39,284	0/0:25,0:28:47.76:0,48,324	0/0:16,0:19:35.81:0,36,236	1/1:7,9:16:2.25:175,2,0	0/1:6,11:17:26.67:253,0,27	0/0:15,0:15:29.77:0,30,219	0/0:1,0:21:36.67:0,37,106	0/0:4,0:11:14.24:0,14,41	0/0:18,0:22:53.80:0,54,367	0/0:15,0:17:42.22:0,42,307	0/0:26,0:27:27.75:0,28,331	0/0:31,0:32:70.49:0,70,495	0/1:5,3:9:14.27:14,0,73	1/1:6,9:15:5.14:212,5,0	1/1:8,12:22:15.99:275,16,0	1/1:1,16:18:53.89:502,54,0	0/0:27,0:30:64.97:0,65,454	0/0:31,0:31:67.54:0,68,485	0/0:27,0:29:52.58:0,53,362	0/0:5,0:7:16:0,16,99
chr10	51914397	.	GGGGGT	G	6980.94	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=10.666;DP=453;FS=5.460;HRun=0;HaplotypeScore=91.5562;InbreedingCoeff=0.9878;MQ=77.15;MQ0=1;MQRankSum=-3.735;QD=36.74;ReadPosRankSum=1.506;VQSLOD=4.5901;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,22:27:53.72:1036,54,0	1/1:0,14:14:39.13:749,39,0	0/0:24,0:20:30.09:0,30,648	0/0:17,0:12:21.79:0,22,447	0/0:15,0:15:30.10:0,30,872	0/0:16,0:16:21.04:0,21,525	0/0:13,0:13:33.10:0,33,901	1/1:10,16:26:48.09:822,48,0	0/0:14,0:14:30.10:0,30,839	0/0:12,0:12:30.10:0,30,844	0/0:13,0:13:36.11:0,36,916	0/0:19,0:19:39.09:0,39,1063	0/0:11,0:11:21.07:0,21,614	0/0:15,0:15:27.09:0,27,783	1/1:8,16:24:36.12:691,36,0	1/1:2,14:16:39.13:749,39,0	0/0:17,0:17:42.14:0,42,1227	0/0:18,0:18:45.15:0,45,1295	1/1:4,8:12:24.08:456,24,0	1/1:11,20:31:51.17:979,51,0	1/1:6,16:22:36.12:691,36,0	0/0:8,0:8:18.06:0,18,482	0/0:7,0:7:21.07:0,21,603	0/0:12,0:12:15.05:0,15,438	0/0:10,0:10:24.08:0,24,659	0/0:18,0:18:39.13:0,39,1117	1/1:1,17:18:42.14:806,42,0	0/0:4,0:4:12.04:0,12,342
chr10	51915211	.	TCACACACACACA	T	1070.52	PASS	AB=0.888;AC=8;AF=0.143;AN=56;BaseQRankSum=4.561;DP=413;FS=2.553;HRun=0;HaplotypeScore=147.4943;InbreedingCoeff=0.5151;MQ=66.65;MQ0=8;MQRankSum=-3.708;QD=11.51;ReadPosRankSum=-1.462;VQSLOD=2.6439;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:24,1:27:99:169,0,198	1/1:6,2:8:9.03:277,9,0	0/0:25,0:19:9.03:0,9,207	0/0:17,0:12:6.02:0,6,131	0/0:14,0:14:15.05:0,15,714	0/0:14,0:14:24.08:0,24,1155	0/0:14,0:14:15.05:0,15,454	0/0:14,0:13:9.49:0,9,173	0/0:8,0:8:15.05:0,15,721	0/0:16,0:16:21.07:0,21,959	0/0:9,0:10:12.04:0,12,497	0/0:10,0:13:21.07:0,21,513	0/0:13,0:17:21.07:0,21,553	0/0:15,0:15:30.10:0,30,1363	1/1:19,3:22:12.03:335,12,0	1/1:11,4:15:12.04:413,12,0	0/0:17,0:17:30.53:0,31,1221	0/0:12,0:12:18.06:0,18,642	0/0:13,0:14:3.01:0,3,37	0/0:10,0:12:24.06:0,24,475	0/0:17,0:18:9.01:0,9,102	0/0:8,0:9:9.03:0,9,277	0/1:18,0:19:17.48:17,0,605	0/0:7,0:8:18.06:0,18,503	0/0:18,0:17:21.07:0,21,1072	0/0:13,0:12:18.06:0,18,861	0/0:15,0:16:18.88:0,19,460	0/0:4,0:3:3.01:0,3,157
chr10	51915261	.	CG	C	2769.17	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=7.412;DP=319;FS=1.853;HRun=10;HaplotypeScore=61.9251;InbreedingCoeff=0.8212;MQ=66.85;MQ0=10;MQRankSum=-2.770;QD=13.64;ReadPosRankSum=5.975;VQSLOD=3.5826;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,21:23:41.58:363,42,0	1/1:0,5:5:15:130,15,0	0/0:22,0:12:29.28:0,29,269	0/0:15,0:10:27.84:0,28,219	0/0:6,0:5:5.99:0,6,56	0/0:10,0:10:14.18:0,14,142	0/0:16,0:16:33.03:0,33,324	1/1:4,11:14:32.98:284,33,0	0/0:9,0:9:26.91:0,27,251	0/0:3,0:3:6.02:0,6,66	1/1:4,0:4:2.49:9,2,0	1/1:6,11:16:32.99:286,33,0	1/1:2,5:7:11.98:104,12,0	0/0:12,0:11:14.09:0,14,168	1/1:1,12:13:32.80:286,33,0	1/1:1,5:6:14.98:127,15,0	1/1:1,0:15:11.98:35,12,0	1/1:3,0:16:8.15:24,8,0	1/1:0,3:3:9:78,9,0	1/1:2,8:10:17.91:156,18,0	1/1:6,21:26:38.94:338,39,0	1/1:2,8:10:20.99:182,21,0	1/1:3,4:7:5.99:52,6,0	1/1:2,15:15:44.99:389,45,0	0/0:9,2:11:1:0,1,230	0/0:7,0:7:9.48:0,9,91	1/1:0,6:6:14.99:130,15,0	0/0:4,0:3:2.37:0,2,8
chr10	51916044	.	AG	A	3479.22	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=9.287;DP=769;FS=0.384;HRun=5;HaplotypeScore=117.4803;InbreedingCoeff=0.9995;MQ=88.25;MQ0=0;MQRankSum=-3.300;QD=25.40;ReadPosRankSum=2.238;VQSLOD=2.3041;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,147,1989	0/0:14,0:14:42.13:0,42,558	0/0:34,0:34:87.29:0,87,1175	0/0:25,0:25:63.20:0,63,815	0/0:20,0:20:54.13:0,54,689	0/0:16,0:16:48.12:0,48,634	0/0:25,0:25:75.20:0,75,976	0/0:34,0:34:90.28:0,90,1201	0/0:18,0:18:51.17:0,51,697	0/0:27,0:27:78.26:0,78,1054	0/0:19,0:19:54.18:0,54,736	1/1:4,33:37:78.19:865,78,0	1/1:3,30:33:90.21:1006,90,0	0/0:32,0:32:96.30:0,96,1284	0/0:31,0:31:84.23:0,84,1114	0/0:30,0:30:84.25:0,84,1116	0/0:31,0:31:90.30:0,90,1230	0/0:29,0:29:81.23:0,81,1087	0/0:22,0:22:60.15:0,60,785	0/0:32,0:32:96.32:0,96,1311	0/0:41,0:41:99:0,102,1370	1/1:5,17:22:39.11:442,39,0	1/1:0,25:25:66.15:734,66,0	1/1:2,18:20:39.09:432,39,0	0/0:25,0:25:63.21:0,63,862	0/0:37,0:37:99:0,105,1423	0/0:32,0:31:93.29:0,93,1253	0/0:8,0:8:24.04:0,24,291
chr10	51916102	.	G	GAC	17540.34	PASS	AB=0.520;AC=29;AF=0.518;AN=56;BaseQRankSum=16.099;DP=743;FS=0.909;HRun=0;HaplotypeScore=123.3723;InbreedingCoeff=0.9406;MQ=76.20;MQ0=1;MQRankSum=-2.506;QD=42.68;ReadPosRankSum=1.275;VQSLOD=6.2738;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,129,1784	0/1:1,12:13:6.83:564,0,7	0/0:19,0:19:48.16:0,48,661	0/0:22,0:22:37.94:0,38,507	0/0:17,0:17:51.17:0,51,730	0/0:19,0:18:57.19:0,57,816	0/0:26,0:26:72.21:0,72,993	1/1:3,20:24:63.20:1112,63,0	0/0:30,0:30:90.29:0,90,1268	0/0:34,0:34:93.30:0,93,1300	0/0:16,0:16:48.16:0,48,686	1/1:2,38:41:99:2026,111,0	1/1:1,30:32:78.27:1421,78,0	0/0:33,0:33:99:0,99,1363	1/1:3,34:36:72.25:1317,72,0	1/1:2,24:27:66.11:1201,66,0	1/1:6,15:20:42.14:768,42,0	1/1:3,25:28:69.24:1263,69,0	1/1:2,25:27:75.23:1276,75,0	1/1:5,24:29:69.24:1258,69,0	1/1:4,23:28:45.12:789,45,0	1/1:2,22:24:60.21:1091,60,0	1/1:1,20:21:42.14:767,42,0	1/1:1,27:28:66.23:1207,66,0	0/0:23,0:23:66.20:0,66,925	0/0:35,0:35:99:0,99,1413	1/1:1,30:31:81.27:1481,81,0	0/0:10,0:10:30.10:0,30,429
chr10	51916749	.	T	TAC	14029.28	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-14.954;DP=756;FS=6.849;HRun=0;HaplotypeScore=90.8186;InbreedingCoeff=0.9977;MQ=69.30;MQ0=4;MQRankSum=0.199;QD=36.73;ReadPosRankSum=4.234;VQSLOD=7.2544;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:69.18:0,69,844	1/1:1,13:14:33.11:557,33,0	0/0:35,0:25:49.33:0,49,598	0/0:52,0:32:58.46:0,58,697	0/0:31,0:31:78.25:0,78,1004	0/0:36,0:36:99:0,99,1274	0/0:25,0:25:63.20:0,63,811	1/1:12,28:41:87.29:1438,87,0	0/0:22,0:22:57.17:0,57,718	0/0:31,0:31:87.28:0,87,1120	0/0:25,0:25:69.22:0,69,888	1/1:1,27:28:72.25:1214,72,0	1/1:3,29:31:66.23:1113,66,0	0/0:22,0:22:63.20:0,63,810	1/1:7,21:28:51.17:861,51,0	1/1:2,17:19:36.12:607,36,0	1/1:7,25:32:66.23:1111,66,0	1/1:3,12:15:30.10:506,30,0	1/1:3,12:16:42.13:684,42,0	1/1:3,28:32:78.25:1312,78,0	1/1:3,22:25:57.11:962,57,0	1/1:3,20:22:47.96:810,48,0	1/1:1,28:29:78.27:1309,78,0	1/1:2,15:17:39.13:658,39,0	0/0:29,0:29:75.23:0,75,952	0/0:36,0:36:87.28:0,87,1120	1/1:3,26:30:33.40:887,33,0	0/0:5,0:5:15.05:0,15,192
chr10	51917339	.	CAT	C	3612.79	PASS	AB=0.984;AC=39;AF=0.696;AN=56;BaseQRankSum=6.533;DP=607;FS=22.572;HRun=0;HaplotypeScore=101.7874;InbreedingCoeff=-0.0591;MQ=46.51;MQ0=31;MQRankSum=0.483;QD=6.28;ReadPosRankSum=-0.598;VQSLOD=1.5204;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:34,0:32:57.20:435,57,0	0/1:5,0:5:6.12:58,0,6	0/1:17,0:2:4.62:8,0,5	0/1:24,0:10:23.70:24,0,65	0/0:17,0:16:18.90:0,19,359	0/1:23,0:22:84.20:84,0,91	0/1:33,0:27:1.20:1,0,377	0/1:28,0:25:44.33:191,0,44	0/1:21,0:21:62.35:62,0,144	0/1:28,0:28:28.41:28,0,359	0/0:15,0:15:4.02:0,4,87	1/1:24,0:24:29.37:280,29,0	1/1:16,0:15:31.06:215,31,0	0/1:20,0:18:44.74:45,0,132	1/1:27,0:25:22.35:204,22,0	1/1:23,0:20:32.11:261,32,0	1/1:26,0:26:0.80:243,1,0	1/1:15,0:15:39.79:275,40,0	0/1:17,5:20:43.40:129,0,43	1/1:16,0:13:16.69:125,17,0	1/1:25,0:23:14.95:118,15,0	1/1:29,0:26:23.21:192,23,0	1/1:23,0:22:21.33:160,21,0	1/1:32,0:30:24.94:204,25,0	0/1:13,0:13:7.99:8,0,174	0/1:21,0:21:53.40:53,0,324	1/1:18,0:15:19.68:173,20,0	0/1:11,0:9:34.85:35,0,93
chr10	51917345	.	C	CAT	293.21	PASS	AB=0.939;AC=5;AF=0.089;AN=56;BaseQRankSum=4.101;DP=616;FS=5.610;HRun=0;HaplotypeScore=127.1594;InbreedingCoeff=0.0422;MQ=45.07;MQ0=33;MQRankSum=3.598;QD=2.33;ReadPosRankSum=0.016;VQSLOD=2.0849;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:31:26.79:0,27,320	0/0:5,0:5:11.81:0,12,82	0/0:14,0:2:2.90:0,3,16	0/0:18,0:6:17.93:0,18,147	0/0:20,0:19:38.94:0,39,371	0/0:24,0:23:21.01:0,21,268	0/0:36,0:29:62.43:0,62,634	0/0:37,0:33:62.71:0,63,420	0/0:20,0:20:30.01:0,30,343	0/0:27,0:27:68.14:0,68,630	0/0:13,0:13:20.93:0,21,223	0/1:26,0:26:99:128,0,113	0/1:16,0:15:45.78:93,0,46	0/0:20,0:18:35.79:0,36,332	0/0:25,0:23:20.02:0,20,193	0/0:23,0:19:35.77:0,36,272	0/0:24,0:25:6.05:0,6,178	0/0:18,0:18:38.27:0,38,268	0/0:21,0:19:48.87:0,49,333	0/0:18,0:15:18.74:0,19,148	0/0:30,0:28:15.37:0,15,118	0/1:31,0:28:1.74:104,0,2	0/1:21,0:20:13.85:58,0,14	0/1:18,13:30:27.07:27,0,136	0/0:13,0:13:26.84:0,27,271	0/0:21,0:21:55.03:0,55,551	0/0:19,0:16:40.45:0,40,255	0/0:10,0:8:17.98:0,18,212
chr10	51917355	.	C	CAG	317.77	PASS	AB=0.945;AC=7;AF=0.125;AN=56;BaseQRankSum=2.219;DP=625;FS=2.125;HRun=0;HaplotypeScore=131.4650;InbreedingCoeff=0.1428;MQ=44.55;MQ0=30;MQRankSum=1.261;QD=1.99;ReadPosRankSum=-0.387;VQSLOD=2.6857;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:32,0:30:8.90:9,0,153	0/0:6,0:6:11.90:0,12,85	0/0:9,0:1:3.01:0,3,42	0/0:22,0:8:16.57:0,17,121	0/0:18,0:17:35.92:0,36,343	0/0:25,0:24:24.05:0,24,300	0/0:39,0:32:65.34:0,65,656	0/0:37,0:35:55.04:0,55,538	0/0:18,0:18:27.02:0,27,320	0/0:33,0:33:80.70:0,81,759	0/0:12,0:12:21:0,21,229	0/1:28,0:27:98.94:99,0,139	0/1:15,0:15:38.36:38,0,120	0/0:21,0:19:29.57:0,30,275	0/0:24,0:22:6.31:0,6,154	0/0:19,0:15:23.73:0,24,172	0/0:25,0:25:37.52:0,38,310	0/0:19,0:19:47.02:0,47,327	0/0:21,0:20:40.52:0,41,281	0/0:19,0:16:16.48:0,16,119	0/0:31,0:30:18.05:0,18,158	0/1:20,12:29:24.03:24,0,79	0/1:23,0:21:57.43:57,0,73	1/1:30,0:28:15.27:222,15,0	0/0:12,0:12:20.64:0,21,207	0/0:21,0:21:54.98:0,55,549	0/0:21,0:18:28.71:0,29,261	0/0:13,0:11:26.39:0,26,295
chr10	51918235	.	AAAGAAGAGGAAGAGGAAGAAGAAG	A	4341.43	PASS	AB=1.000;AC=25;AF=0.463;AN=54;BaseQRankSum=10.579;DP=451;FS=8.825;HRun=0;HaplotypeScore=235.7595;InbreedingCoeff=0.4117;MQ=47.93;MQ0=27;MQRankSum=-4.949;QD=18.96;ReadPosRankSum=1.631;VQSLOD=2.4561;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:13,0:13:99:142,0,247	0/1:5,0:5:77.77:78,0,126	./.	0/0:21,0:3:6:0,6,56	0/0:14,0:13:39.11:0,39,1182	0/0:26,0:23:69.13:0,69,1937	0/0:16,0:14:33.07:0,33,491	1/1:25,0:23:42.92:496,43,0	0/1:12,0:12:9.28:9,0,714	0/0:30,0:30:89.73:0,90,2420	0/0:18,0:17:44.90:0,45,1191	1/1:8,0:8:12.04:182,12,0	1/1:21,0:21:29.34:373,29,0	0/0:15,0:14:36.05:0,36,702	0/1:15,0:14:92.04:330,0,92	0/1:15,0:15:77.34:342,0,77	1/1:19,0:13:2.51:11,3,0	0/1:12,0:10:35.24:35,0,65	1/1:14,0:13:33.10:506,33,0	1/1:18,0:17:45.14:721,45,0	1/1:12,0:12:23.79:297,24,0	0/0:3,9:12:3.01:0,3,38	0/1:15,0:15:49.71:215,0,50	1/1:10,0:8:12.56:157,13,0	0/0:19,0:19:54.14:0,54,1130	0/0:13,0:13:36.11:0,36,985	1/1:15,0:15:33.10:447,33,0	0/0:11,0:10:27.09:0,27,524
chr10	51918240	.	AGAGGAAGAG	A	4711.70	PASS	AB=1.000;AC=27;AF=0.500;AN=54;BaseQRankSum=10.859;DP=414;FS=6.477;HRun=0;HaplotypeScore=112.7203;InbreedingCoeff=0.5691;MQ=47.14;MQ0=21;MQRankSum=-5.942;QD=23.44;ReadPosRankSum=0.371;VQSLOD=3.8257;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:11,0:11:22.72:23,0,247	0/1:4,0:4:46.06:118,0,46	./.	0/0:19,0:2:6.01:0,6,61	0/0:14,0:14:42.13:0,42,767	0/0:25,0:23:67.74:0,68,1346	0/0:12,0:11:33.04:0,33,487	1/1:4,15:18:43.59:498,44,0	0/1:15,0:15:26.84:27,0,419	0/0:32,0:32:95.74:0,96,1724	0/0:21,0:21:30.20:0,30,773	1/1:6,0:6:12.04:182,12,0	1/1:17,0:17:3.88:397,4,0	0/0:13,0:13:36.05:0,36,524	1/1:13,0:12:30.10:457,30,0	1/1:15,0:15:36.10:513,36,0	1/1:14,0:10:2.63:14,3,0	0/1:12,0:9:40.45:40,0,52	1/1:12,0:12:33.10:507,33,0	1/1:17,0:16:45.14:686,45,0	1/1:10,0:10:21.93:294,22,0	0/0:11,0:11:3.01:0,3,38	0/1:12,0:12:1.34:279,0,1	1/1:10,0:7:21.01:225,21,0	0/0:18,0:18:54.14:0,54,855	0/0:14,0:14:38.89:0,39,651	1/1:12,0:12:33.10:452,33,0	0/0:10,0:9:27.09:0,27,440
chr10	51918348	.	AAAAT	A	910.19	PASS	AB=1.000;AC=6;AF=0.107;AN=56;BaseQRankSum=1.530;DP=641;FS=0.000;HRun=0;HaplotypeScore=164.7334;InbreedingCoeff=0.6152;MQ=60.36;MQ0=6;MQRankSum=-5.280;QD=12.64;ReadPosRankSum=-3.885;VQSLOD=2.3494;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:53.57:0,54,1412	0/0:6,0:6:15.19:0,15,64	0/0:35,0:11:14.27:0,14,368	0/0:33,0:11:16.04:0,16,283	0/0:39,0:39:99:0,114,2651	0/0:22,0:22:63.22:0,63,1576	0/0:14,0:14:36.06:0,36,652	0/0:35,0:35:60.40:0,60,348	0/0:18,0:18:51.16:0,51,1231	0/0:17,0:17:51.18:0,51,1314	0/0:28,0:28:84.25:0,84,1958	0/0:12,0:12:27.03:0,27,127	0/0:36,0:36:90.73:0,91,396	0/0:19,0:19:54.15:0,54,1197	0/0:27,0:27:10.44:0,10,199	0/1:19,0:19:10.18:10,0,189	1/1:7,7:13:27.07:407,27,0	1/1:9,10:18:38.51:608,39,0	0/0:25,0:25:33.32:0,33,188	0/0:27,0:27:73.06:0,73,328	0/0:9,0:9:24.63:0,25,110	0/0:15,0:15:34.94:0,35,140	0/0:23,0:23:28.43:0,28,202	0/1:20,0:20:20.38:20,0,140	0/0:28,0:28:78.23:0,78,1851	0/0:23,0:23:66.23:0,66,1668	0/0:37,0:37:63.99:0,64,349	0/0:20,0:20:60.21:0,60,1484
chr10	51918356	.	GA	G	8124.77	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=17.412;DP=632;FS=10.356;HRun=7;HaplotypeScore=104.0378;InbreedingCoeff=0.9911;MQ=65.92;MQ0=4;MQRankSum=-3.616;QD=24.85;ReadPosRankSum=0.889;VQSLOD=4.2627;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:54.35:0,54,712	1/1:0,6:6:18.04:183,18,0	0/0:33,0:17:11.66:0,12,397	0/0:27,0:9:14.43:0,14,158	0/0:38,0:38:99:0,108,1333	0/0:24,0:24:69.20:0,69,854	0/0:10,0:10:27.07:0,27,327	1/1:2,36:38:99:1098,108,0	0/0:18,0:18:42.13:0,42,526	0/0:19,0:19:57.17:0,57,705	0/0:29,0:29:78.23:0,78,956	1/1:2,10:12:27.06:275,27,0	1/1:1,34:35:99:1010,99,0	0/0:17,0:17:48.15:0,48,604	1/1:3,25:28:63.14:642,63,0	1/1:4,18:22:30.06:306,30,0	1/1:6,7:12:26.95:229,27,0	1/1:4,13:16:42:379,42,0	1/1:3,23:26:69.16:703,69,0	1/1:3,26:29:75.16:763,75,0	1/1:0,10:10:27.06:274,27,0	1/1:0,16:16:42.09:428,42,0	1/1:2,20:22:54.12:551,54,0	1/1:5,13:18:39.09:397,39,0	0/0:25,0:25:75.23:0,75,932	0/0:22,0:22:66.21:0,66,823	1/1:4,31:35:87.19:886,87,0	0/0:20,0:20:51.15:0,51,630
chr10	51918914	.	G	GCA	1236.84	PASS	AB=0.820;AC=11;AF=0.204;AN=54;BaseQRankSum=3.217;DP=560;FS=0.653;HRun=0;HaplotypeScore=127.0712;InbreedingCoeff=0.0260;MQ=51.83;MQ0=14;MQRankSum=1.584;QD=5.98;ReadPosRankSum=-0.163;VQSLOD=2.9546;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:12,0:31:12.71:89,13,0	0/0:10,0:11:21.10:0,21,96	0/0:23,0:6:6.02:0,6,64	./.	0/0:20,0:21:38.69:0,39,392	0/0:16,0:20:44.53:0,45,431	0/0:13,0:17:35.43:0,35,334	0/0:27,0:26:15.51:0,16,144	0/0:10,0:11:20.89:0,21,221	0/1:22,1:23:11.10:11,0,305	0/0:19,0:19:39.11:0,39,452	0/1:7,10:16:17.05:248,0,17	0/1:6,9:15:17.31:206,0,17	0/0:14,0:17:36.07:0,36,356	0/1:20,0:19:56.65:57,0,68	0/1:17,0:17:15.72:16,0,45	0/0:27,0:27:28.74:0,29,150	0/0:17,0:21:20.70:0,21,195	0/0:25,0:25:23.40:0,23,186	0/0:21,0:21:8.62:0,9,48	0/1:25,0:25:0.61:1,0,40	0/1:11,5:17:48.29:266,0,48	0/1:13,3:16:51.55:75,0,52	0/1:7,14:24:3.86:414,0,4	0/0:20,0:21:44.76:0,45,456	0/0:22,0:22:42.12:0,42,432	0/0:18,0:19:32.12:0,32,253	0/0:3,0:3:9.03:0,9,103
chr10	51918934	.	ACACACG	A	1376.20	PASS	AB=0.985;AC=17;AF=0.304;AN=56;BaseQRankSum=3.099;DP=583;FS=0.432;HRun=0;HaplotypeScore=165.4326;InbreedingCoeff=0.0121;MQ=56.55;MQ0=15;MQRankSum=-0.672;QD=4.56;ReadPosRankSum=-5.686;VQSLOD=0.3990;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:38,0:38:99:191,0,249	0/1:11,1:12:99:148,0,115	0/0:26,0:10:13.12:0,13,285	0/0:34,0:8:20.80:0,21,227	0/0:20,0:19:54.06:0,54,1255	0/0:21,0:21:57.16:0,57,1429	0/0:18,0:18:46.84:0,47,1033	0/1:20,0:19:68.46:183,0,68	0/0:13,0:13:34.69:0,35,783	0/0:26,0:24:46.04:0,46,1415	0/0:18,0:18:48.12:0,48,1394	0/1:19,0:18:37.77:38,0,493	0/1:17,0:17:23.75:24,0,398	0/0:20,0:20:50.83:0,51,1211	0/1:21,1:21:13.49:13,0,349	0/0:18,0:18:24.77:0,25,239	1/1:28,1:29:29.30:328,29,0	0/1:20,1:21:99:155,0,121	0/1:19,0:19:99:111,0,161	1/1:15,0:15:1.94:6,2,0	1/1:30,0:28:38.09:253,38,0	0/1:18,0:18:13.40:13,0,559	0/1:14,0:14:39.89:40,0,345	0/1:28,0:28:43.67:44,0,738	0/0:22,0:21:54.16:0,54,1464	0/0:22,0:22:60.11:0,60,1436	0/0:13,6:19:7.04:0,7,189	0/0:4,0:4:11.99:0,12,226
chr10	51918938	.	ACG	A	3669.25	PASS	AB=0.988;AC=24;AF=0.429;AN=56;BaseQRankSum=5.732;DP=573;FS=0.383;HRun=0;HaplotypeScore=124.4875;InbreedingCoeff=0.2866;MQ=57.90;MQ0=11;MQRankSum=-0.264;QD=10.25;ReadPosRankSum=-1.322;VQSLOD=2.7479;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:40,0:40:10.96:298,11,0	1/1:6,6:12:28.30:308,28,0	0/0:24,0:10:16.07:0,16,213	0/0:32,0:9:20.57:0,21,179	0/0:21,0:20:31.06:0,31,690	0/0:22,0:22:23.44:0,23,707	0/0:17,0:17:10.36:0,10,518	0/1:21,0:21:23.03:292,0,23	0/0:14,0:14:33.31:0,33,447	0/0:23,0:22:27.93:0,28,712	0/0:17,0:17:45.12:0,45,773	0/1:19,0:18:35.33:97,0,35	0/1:16,1:17:19.11:72,0,19	0/1:17,0:17:2.56:3,0,544	1/1:14,9:22:41.47:704,41,0	1/1:2,16:18:30.03:429,30,0	1/1:30,0:30:56.98:426,57,0	1/1:19,0:19:8.96:187,9,0	0/1:17,0:17:46.19:184,0,46	0/1:16,0:16:9.80:10,0,22	1/1:31,0:29:48.07:360,48,0	0/1:17,0:17:66.78:83,0,67	0/1:13,1:14:39.91:116,0,40	0/1:28,0:28:41.47:94,0,41	0/0:20,0:20:20.19:0,20,711	0/0:21,0:21:26.71:0,27,691	0/1:19,0:19:6.17:6,0,152	0/0:4,0:4:11.99:0,12,162
chr10	51918942	.	ACG	A	1017.80	PASS	AB=0.891;AC=14;AF=0.250;AN=56;BaseQRankSum=6.306;DP=572;FS=25.332;HRun=0;HaplotypeScore=137.2847;InbreedingCoeff=0.3254;MQ=60.86;MQ0=10;MQRankSum=-3.104;QD=4.87;ReadPosRankSum=-0.071;VQSLOD=1.5496;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:58.55:0,59,366	1/1:10,2:12:6.37:61,6,0	0/0:24,0:11:10.34:0,10,384	0/0:31,0:10:26.66:0,27,359	0/0:23,0:22:66.02:0,66,992	0/0:19,0:19:57.15:0,57,982	0/0:17,0:17:46.90:0,47,661	1/1:15,7:22:8.72:191,9,0	0/0:15,0:15:35.82:0,36,641	0/0:22,0:21:55.46:0,55,996	0/0:17,0:17:47.99:0,48,804	0/0:16,0:15:23.27:0,23,318	0/0:14,1:15:4.04:0,4,229	0/0:18,0:18:52.03:0,52,856	0/1:21,2:22:52.35:76,0,52	0/1:17,1:18:11.99:39,0,12	0/1:24,8:32:41.71:231,0,42	1/1:11,7:18:27.60:238,28,0	0/1:15,3:18:50.92:152,0,51	1/1:12,3:15:2.92:29,3,0	0/1:29,3:30:17.74:93,0,18	0/0:18,0:18:11.33:0,11,364	0/0:14,0:14:19.70:0,20,258	0/0:26,0:27:39.29:0,39,487	0/0:18,0:18:44.98:0,45,768	0/0:23,0:23:36.09:0,36,923	0/1:17,2:19:71.95:72,0,83	0/0:5,0:5:14.96:0,15,177
chr10	51918952	.	ACG	A	1139.37	PASS	AB=0.909;AC=18;AF=0.321;AN=56;BaseQRankSum=6.422;DP=546;FS=15.008;HRun=0;HaplotypeScore=134.1836;InbreedingCoeff=0.2857;MQ=72.95;MQ0=5;MQRankSum=-0.372;QD=4.63;ReadPosRankSum=1.883;VQSLOD=2.3745;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:66.99:0,67,935	1/1:9,2:11:10.27:78,10,0	0/0:24,0:16:48:0,48,777	0/0:29,0:17:41.80:0,42,657	0/0:21,0:21:63.13:0,63,1138	0/0:21,0:21:63.12:0,63,1157	0/0:20,0:20:57.11:0,57,948	1/1:17,1:17:7.92:103,8,0	0/0:13,0:13:39.08:0,39,744	0/0:24,0:23:66.17:0,66,1168	0/0:18,0:18:51.15:0,51,934	0/1:16,0:16:35.74:36,0,141	0/1:14,1:15:27.73:28,0,144	0/0:19,0:19:57.20:0,57,1098	0/1:18,2:20:12.92:105,0,13	0/1:15,1:16:20.44:64,0,20	0/1:21,8:29:22.70:243,0,23	1/1:9,8:17:26.12:226,26,0	0/1:11,3:14:19.13:88,0,19	1/1:12,3:15:11.96:102,12,0	1/1:29,3:30:9.09:180,9,0	0/0:16,0:16:2.81:0,3,192	0/0:12,0:12:11.23:0,11,148	0/1:29,0:29:19.93:20,0,293	0/0:18,0:18:48.13:0,48,918	0/0:23,0:23:69.17:0,69,1185	0/1:12,2:14:27.96:48,0,28	0/0:5,0:5:15.01:0,15,227
chr10	51919818	.	C	CA	695.50	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=0.188;DP=589;FS=3.523;HRun=9;HaplotypeScore=78.1272;InbreedingCoeff=0.7859;MQ=71.56;MQ0=1;MQRankSum=-0.984;QD=15.46;ReadPosRankSum=-0.741;VQSLOD=3.8505;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:47.99:0,48,416	0/0:11,0:12:29.03:0,29,240	0/0:18,0:14:20.94:0,21,173	0/0:15,0:13:26.49:0,26,208	0/0:29,0:29:37.61:0,38,545	0/0:22,0:22:62.98:0,63,547	0/0:15,0:15:38.99:0,39,339	0/0:35,0:34:92.97:0,93,804	0/0:20,0:20:56.98:0,57,495	0/0:27,0:28:77.01:0,77,655	0/0:35,0:35:88.99:0,89,758	0/0:14,0:14:35.98:0,36,312	0/0:19,0:19:47.91:0,48,408	0/0:20,1:22:20.32:0,20,390	0/0:27,0:27:74.96:0,75,647	0/0:24,0:24:59.98:0,60,520	1/1:0,17:17:48.09:517,48,0	1/1:2,13:15:26.89:298,27,0	0/1:12,0:13:4.11:4,0,185	0/0:33,0:33:83.96:0,84,726	0/0:6,0:6:8.97:0,9,74	0/0:17,0:17:38.97:0,39,338	0/0:34,0:34:86.97:0,87,755	0/0:13,0:13:32.99:0,33,286	0/0:27,0:27:68.98:0,69,599	0/0:27,0:27:77.93:0,78,670	0/0:29,1:30:47.76:0,48,636	0/0:4,0:4:9:0,9,78
chr10	51919938	.	ATGTGTG	A	7007.12	PASS	AB=0.929;AC=23;AF=0.411;AN=56;BaseQRankSum=13.648;DP=649;FS=4.989;HRun=0;HaplotypeScore=192.7622;InbreedingCoeff=0.9002;MQ=58.05;MQ0=9;MQRankSum=-11.897;QD=26.24;ReadPosRankSum=-0.630;VQSLOD=4.1818;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:13:11.64:0,12,272	1/1:5,10:16:27.09:558,27,0	0/0:36,0:21:29.63:0,30,734	0/0:32,0:17:18.06:0,18,491	0/0:32,0:36:71.55:0,72,1873	0/0:14,0:19:42.14:0,42,1089	0/0:24,0:24:50.58:0,51,1477	1/1:21,0:24:17.94:205,18,0	0/0:31,0:31:72.19:0,72,2234	0/0:28,0:30:66.22:0,66,1822	0/0:17,0:19:51.16:0,51,1398	1/1:9,17:27:51.64:1004,52,0	1/1:11,14:28:49.01:927,49,0	0/0:24,0:25:56.95:0,57,1710	1/1:8,14:24:45.62:888,46,0	1/1:13,15:30:57.17:1057,57,0	0/0:7,0:13:5.87:0,6,84	0/0:8,0:10:8.03:0,8,92	1/1:6,0:6:6.02:84,6,0	1/1:15,0:29:39.09:445,39,0	0/1:12,0:13:0:0,0,0	1/1:12,19:32:54.71:1024,55,0	1/1:8,7:15:24.08:459,24,0	0/0:5,3:8:2.22:0,2,31	0/0:22,0:22:48.15:0,48,1471	0/0:26,0:29:71.54:0,72,2076	1/1:10,0:19:29.88:354,30,0	0/0:32,0:35:71.47:0,71,2085
chr10	51920003	.	TATATGTGTATGTATGC	T	6043.20	PASS	AB=0.787;AC=22;AF=0.393;AN=56;BaseQRankSum=12.429;DP=803;FS=10.783;HRun=0;HaplotypeScore=422.2658;InbreedingCoeff=0.7444;MQ=56.61;MQ0=3;MQRankSum=-9.654;QD=17.32;ReadPosRankSum=-2.662;VQSLOD=1.6876;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:22:9.57:10,0,2064	1/1:7,10:17:2.49:6,2,0	0/0:34,0:21:39.12:0,39,1688	0/0:42,0:31:47.25:0,47,1763	0/0:29,0:29:75.26:0,75,5071	0/0:37,0:37:93.32:0,93,6471	0/0:28,0:28:66.23:0,66,3840	1/1:22,31:53:92.94:2116,93,0	0/0:28,0:28:72.25:0,72,4575	0/0:29,0:28:78.27:0,78,5088	0/0:29,0:29:75.24:0,75,5259	0/1:7,20:27:0.62:2,0,1	1/1:8,19:27:15.05:591,15,0	0/0:34,0:34:83.85:0,84,5918	1/1:9,26:35:14.79:539,15,0	1/1:9,19:28:7.20:135,7,0	0/0:25,0:25:48.16:0,48,3278	0/0:12,0:12:28.87:0,29,1777	1/1:5,9:14:26.72:665,27,0	1/1:7,32:39:7.88:407,8,0	0/0:8,15:23:0:0,0,1	1/1:4,21:25:1.98:137,2,0	1/1:3,28:31:2.55:136,3,0	0/0:3,7:10:0:0,0,0	0/0:35,0:35:90.31:0,90,6149	0/0:36,0:36:81.27:0,81,5757	1/1:7,24:31:29.90:1300,30,0	0/0:22,0:22:39.13:0,39,2943
chr10	51920015	.	TATG	T	832.56	PASS	AB=0.960;AC=17;AF=0.304;AN=56;BaseQRankSum=11.001;DP=723;FS=9.324;HRun=0;HaplotypeScore=255.9521;InbreedingCoeff=0.5362;MQ=59.19;MQ0=3;MQRankSum=-9.421;QD=3.19;ReadPosRankSum=1.593;VQSLOD=1.0249;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:21.53:0,22,826	0/0:10,0:10:1.17:0,1,10	0/0:30,0:20:54.18:0,54,1247	0/0:39,0:31:80.23:0,80,1443	0/0:27,0:27:81.28:0,81,1996	0/0:39,0:39:99:0,111,2606	0/0:27,0:27:75.26:0,75,1774	0/1:31,0:31:99:416,0,140	0/0:31,0:31:87.30:0,87,2031	0/0:30,0:29:90.31:0,90,2150	0/0:27,0:27:81.28:0,81,1900	0/1:20,2:22:0:2,0,0	1/1:20,3:23:14.69:116,15,0	0/0:38,0:38:99:0,111,2663	0/1:26,4:30:9.01:68,0,9	1/1:19,3:22:2.07:34,2,0	0/0:26,0:26:57.05:0,57,1357	0/0:13,0:13:35.95:0,36,794	0/1:9,0:9:58.83:59,0,60	1/1:33,2:35:8.93:67,9,0	0/1:15,0:15:0:0,0,0	1/1:21,0:21:2.77:23,3,0	1/1:28,0:28:2.77:22,3,0	0/0:7,1:8:0:0,0,0	0/0:37,0:37:99:0,108,2591	0/0:39,0:39:99:0,117,2631	1/1:24,1:24:25.36:190,25,0	0/0:15,0:15:45.15:0,45,1090
chr10	51922726	.	CA	C	13026.65	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=20.149;DP=714;FS=3.573;HRun=1;HaplotypeScore=103.1931;InbreedingCoeff=0.9994;MQ=73.41;MQ0=0;MQRankSum=-2.872;QD=33.40;ReadPosRankSum=1.988;VQSLOD=4.7132;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,117,1829	1/1:0,10:10:30.09:372,30,0	0/0:17,0:17:48.12:0,48,657	0/0:26,0:26:75.23:0,75,1136	0/0:30,0:30:87.30:0,87,1390	0/0:27,0:27:81.26:0,81,1269	0/0:19,0:19:57.19:0,57,907	1/1:3,28:31:87.22:1060,87,0	0/0:25,0:25:75.26:0,75,1194	0/0:31,0:31:87.26:0,87,1344	0/0:21,0:21:60.17:0,60,902	1/1:2,22:24:66.21:818,66,0	1/1:0,30:30:84.26:1041,84,0	0/0:23,0:23:69.20:0,69,1053	1/1:1,29:30:78.25:967,78,0	1/1:2,22:24:24.82:671,25,0	1/1:0,17:18:50.67:631,51,0	1/1:0,17:17:45.11:541,45,0	1/1:1,30:31:90.25:1088,90,0	1/1:1,27:28:78.14:930,78,0	1/1:0,29:29:81.21:986,81,0	1/1:1,30:31:78.16:946,78,0	1/1:0,25:25:72.23:893,72,0	1/1:0,28:28:78.25:966,78,0	0/0:33,0:33:96.27:0,96,1461	0/0:25,0:25:72.24:0,72,1130	1/1:1,33:34:90.28:1115,90,0	0/0:8,0:8:24.07:0,24,360
chr10	51923585	.	TAAG	T	8369.41	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=16.684;DP=802;FS=9.399;HRun=0;HaplotypeScore=121.3618;InbreedingCoeff=0.9807;MQ=86.88;MQ0=0;MQRankSum=-8.880;QD=43.14;ReadPosRankSum=1.782;VQSLOD=6.1707;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,141,3085	0/0:14,0:14:36.11:0,36,739	0/0:31,0:31:90.29:0,90,1910	0/0:26,0:26:75.26:0,75,1604	0/0:19,0:19:51.16:0,51,1080	0/0:22,0:22:66.20:0,66,1407	0/0:31,0:31:90.30:0,90,1994	1/1:4,22:26:66.21:1065,66,0	0/0:33,0:33:96.33:0,96,2174	0/0:35,0:35:96.33:0,96,2161	0/0:23,0:23:66.21:0,66,1432	0/0:33,0:33:90.31:0,90,2015	0/0:29,0:29:81.28:0,81,1835	0/0:34,0:34:99:0,99,2221	0/0:48,0:48:99:0,138,3082	0/0:31,0:31:90.31:0,90,2039	1/1:1,29:30:72.25:1198,72,0	1/1:2,9:11:24.08:399,24,0	1/1:0,27:27:81.27:1320,81,0	1/1:1,31:32:93.32:1542,93,0	1/1:2,40:42:99:1697,102,0	0/0:29,0:29:87.29:0,87,1912	0/0:24,0:24:72.25:0,72,1577	0/0:28,0:28:81.28:0,81,1814	0/0:29,0:29:87.30:0,87,1967	0/0:38,0:38:99:0,114,2440	1/1:1,25:26:69.11:1148,69,0	0/0:2,0:2:6.02:0,6,136
chr10	51923818	.	G	GC	1310.35	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-8.618;DP=652;FS=1.424;HRun=1;HaplotypeScore=84.2987;InbreedingCoeff=0.9989;MQ=89.97;MQ0=0;MQRankSum=-4.075;QD=36.40;ReadPosRankSum=1.820;VQSLOD=4.0047;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:66.21:0,66,856	0/0:11,0:11:33.11:0,33,427	0/0:27,0:27:77.24:0,77,941	0/0:23,0:23:53.20:0,53,804	0/0:16,0:16:48.16:0,48,622	0/0:20,0:20:57.19:0,57,740	0/0:26,0:26:78.25:0,78,1012	0/0:36,0:36:87.25:0,87,1100	0/0:26,0:26:75.24:0,75,974	0/0:23,0:23:57.18:0,57,730	0/0:13,0:13:27.07:0,27,336	0/0:30,0:30:84.27:0,84,1090	0/0:28,0:28:84.27:0,84,1090	0/0:25,0:25:75.24:0,75,971	0/0:33,0:33:90.28:0,90,1154	0/0:35,0:34:99:0,102,1324	1/1:0,17:17:51.17:764,51,0	1/1:2,17:19:40.56:668,41,0	0/0:23,0:23:63.17:0,63,788	0/0:12,0:12:33.11:0,33,429	0/0:43,0:43:99:0,123,1596	0/0:22,0:22:57.17:0,57,724	0/0:14,0:14:33.09:0,33,414	0/0:22,0:22:66.18:0,66,827	0/0:17,0:17:48.16:0,48,622	0/0:24,0:24:69.22:0,69,883	0/0:28,0:28:81.26:0,81,1051	0/0:11,0:11:33.11:0,33,429
chr10	51924364	.	TA	T	1676.04	PASS	AB=0.826;AC=17;AF=0.304;AN=56;BaseQRankSum=7.418;DP=571;FS=0.000;HRun=12;HaplotypeScore=62.9478;InbreedingCoeff=0.6945;MQ=72.83;MQ0=5;MQRankSum=0.734;QD=8.92;ReadPosRankSum=0.080;VQSLOD=2.4616;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:46.82:0,47,440	1/1:3,7:10:14.90:115,15,0	0/0:27,0:13:0.46:0,0,79	0/0:22,0:17:8.56:0,9,170	0/0:40,0:41:56.75:0,57,913	0/0:24,0:24:57.10:0,57,572	0/0:14,0:15:35.91:0,36,349	0/0:22,1:23:18.77:0,19,360	0/0:15,0:15:40.86:0,41,401	0/0:13,0:13:33.01:0,33,315	0/0:29,1:31:51.89:0,52,697	1/1:7,10:17:29.86:232,30,0	1/1:1,18:19:13.94:294,14,0	0/0:9,0:9:18.03:0,18,178	1/1:4,14:18:7.46:231,7,0	1/1:3,19:22:32.87:255,33,0	0/1:24,3:28:4.75:5,0,453	0/0:12,0:12:26.99:0,27,262	0/1:13,1:14:19.55:20,0,170	0/0:34,1:36:63.69:0,64,775	0/0:9,0:9:18.02:0,18,176	0/1:6,8:14:34.02:132,0,34	1/1:6,17:23:29.46:232,29,0	1/1:2,19:22:46.86:354,47,0	0/0:25,0:26:25.45:0,25,575	0/0:21,1:22:33.86:0,34,516	0/0:29,0:31:65.52:0,66,611	0/0:7,0:7:15.01:0,15,145
chr10	51924480	.	C	CT	1115.04	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-7.348;DP=623;FS=9.901;HRun=8;HaplotypeScore=60.3466;InbreedingCoeff=0.9906;MQ=68.18;MQ0=2;MQRankSum=-0.389;QD=24.24;ReadPosRankSum=0.926;VQSLOD=4.1204;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:24:61.05:0,61,521	1/1:6,4:10:24.06:268,24,0	0/0:31,0:16:28.63:0,29,222	0/0:23,0:12:16.94:0,17,149	0/0:28,0:28:78.04:0,78,713	0/0:26,0:26:75.04:0,75,686	0/0:19,0:19:54.03:0,54,494	0/0:25,0:25:60.02:0,60,549	0/0:17,0:17:39.02:0,39,357	0/0:25,0:25:62.06:0,62,555	0/0:27,0:27:75.02:0,75,681	0/0:12,0:12:33.02:0,33,302	0/0:20,0:20:54.03:0,54,494	0/0:18,1:19:19.41:0,19,431	1/1:0,13:14:35.94:395,36,0	1/1:3,19:22:29.79:594,30,0	0/0:31,0:31:81.04:0,81,740	0/0:22,0:24:67.08:0,67,581	0/0:23,0:23:56.70:0,57,505	0/0:31,0:31:81.02:0,81,736	0/0:14,0:14:30.01:0,30,274	0/0:17,0:17:48.01:0,48,434	0/0:19,1:20:19.41:0,19,432	0/0:28,0:28:78.04:0,78,714	0/0:19,0:19:54.03:0,54,494	0/0:29,0:29:54.69:0,55,675	0/0:30,0:30:78.04:0,78,713	0/0:14,0:14:40.80:0,41,351
chr10	51924577	.	G	GT	10477.58	PASS	AB=1.000;AC=30;AF=0.536;AN=56;BaseQRankSum=6.207;DP=666;FS=1.289;HRun=1;HaplotypeScore=83.5925;InbreedingCoeff=0.8599;MQ=88.47;MQ0=0;MQRankSum=-4.087;QD=25.19;ReadPosRankSum=4.940;VQSLOD=4.8740;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,22:22:66.22:989,66,0	0/1:15,0:15:11.06:139,0,11	0/0:18,0:18:50.91:0,51,584	0/0:31,0:31:87.42:0,87,934	0/0:19,0:19:57.19:0,57,738	0/0:20,0:20:57.17:0,57,724	0/0:28,0:28:81.24:0,81,1025	1/1:29,0:29:21.30:279,21,0	0/0:23,0:23:69.20:0,69,879	0/0:16,0:16:48.11:0,48,604	0/0:16,0:16:45.15:0,45,583	1/1:1,30:31:87.29:1300,87,0	1/1:2,27:29:75.25:1118,75,0	0/0:21,0:21:63.19:0,63,803	1/1:34,0:34:92.33:501,92,0	1/1:36,0:36:84.82:516,85,0	1/1:0,26:26:72.24:1079,72,0	1/1:1,15:16:42.14:629,42,0	0/1:27,0:27:73.53:207,0,74	1/1:23,0:23:58.29:339,58,0	1/1:33,0:33:55.09:392,55,0	1/1:2,21:23:60.20:893,60,0	1/1:1,19:20:57.19:850,57,0	1/1:1,22:23:18.27:770,18,0	0/0:23,0:23:69.22:0,69,895	0/0:25,0:25:69.22:0,69,896	1/1:29,0:29:81.30:478,81,0	0/0:10,0:10:30.10:0,30,389
chr10	51924578	.	T	TC	11509.84	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=-0.939;DP=664;FS=0.622;HRun=4;HaplotypeScore=80.6041;InbreedingCoeff=0.9995;MQ=89.08;MQ0=0;MQRankSum=-2.869;QD=27.80;ReadPosRankSum=3.241;VQSLOD=4.4127;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:22:65.14:437,65,0	1/1:2,13:15:36.12:493,36,0	0/0:18,0:18:42.07:0,42,452	0/0:32,0:32:69.12:0,69,738	0/0:19,0:19:57.16:0,57,646	0/0:19,0:19:57.16:0,57,644	0/0:27,0:27:75.21:0,75,851	1/1:2,27:29:81.24:1075,81,0	0/0:23,0:23:66.16:0,66,731	0/0:16,0:16:45.13:0,45,510	0/0:16,0:16:48.13:0,48,536	1/1:30,1:31:85.46:557,85,0	1/1:30,0:30:73.84:478,74,0	0/0:21,0:21:63.18:0,63,714	1/1:0,35:35:96.32:1313,96,0	1/1:0,36:36:99:1437,105,0	1/1:27,0:27:71.10:476,71,0	1/1:15,0:15:41.44:273,41,0	1/1:5,21:26:60.17:802,60,0	1/1:1,21:22:60.20:820,60,0	1/1:1,30:31:81.27:1108,81,0	1/1:22,1:23:42.39:393,42,0	1/1:19,1:20:56.11:374,56,0	1/1:23,0:23:22.35:330,22,0	0/0:24,0:24:69.18:0,69,773	0/0:25,0:25:69.20:0,69,782	1/1:0,29:29:84.28:1145,84,0	0/0:10,0:10:30.09:0,30,340
chr10	51925338	.	CT	C	2968.50	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=13.633;DP=549;FS=5.402;HRun=1;HaplotypeScore=80.4974;InbreedingCoeff=0.9904;MQ=88.29;MQ0=0;MQRankSum=-8.567;QD=28.54;ReadPosRankSum=0.804;VQSLOD=3.2882;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,21:23:56.89:613,57,0	0/0:5,0:5:15.05:0,15,240	0/0:30,0:27:56.07:0,56,1210	0/0:35,0:27:72.53:0,73,1105	0/0:20,0:20:60.19:0,60,934	0/0:22,0:22:63.21:0,63,1005	0/0:22,0:22:66.21:0,66,1032	0/0:28,0:28:84.28:0,84,1311	0/0:12,0:12:36.11:0,36,551	0/0:16,0:16:48.16:0,48,767	0/0:21,0:21:60.18:0,60,913	1/1:0,16:16:45.15:584,45,0	1/1:0,16:16:45.15:581,45,0	0/0:25,0:25:72.25:0,72,1146	0/0:21,0:21:63.20:0,63,979	0/0:20,0:20:60.20:0,60,959	0/0:22,0:22:54.17:0,54,832	0/0:17,0:17:48.16:0,48,766	0/0:21,0:21:63.20:0,63,984	0/0:24,0:24:72.25:0,72,1150	0/0:19,0:19:54.18:0,54,851	1/1:0,13:13:36.06:447,36,0	1/1:0,10:10:30.10:389,30,0	1/1:2,24:26:44.08:543,44,0	0/0:14,0:14:42.14:0,42,671	0/0:23,0:23:66.22:0,66,1051	0/0:24,0:24:60.20:0,60,951	0/0:4,0:4:12.04:0,12,192
chr10	51929380	.	C	CA	6498.04	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=6.643;DP=690;FS=3.911;HRun=3;HaplotypeScore=78.0701;InbreedingCoeff=0.9811;MQ=85.02;MQ0=0;MQRankSum=-4.737;QD=35.90;ReadPosRankSum=3.433;VQSLOD=5.5931;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:84.26:0,84,1007	0/0:17,0:17:48.15:0,48,575	0/0:28,0:28:68.35:0,68,818	0/0:19,0:18:39.61:0,40,452	0/0:25,0:25:69.18:0,69,812	0/0:21,0:21:57.16:0,57,671	0/0:23,0:23:66.16:0,66,759	0/0:29,0:29:84.23:0,84,981	0/0:24,0:24:60.17:0,60,709	0/0:29,0:29:75.21:0,75,880	0/0:24,0:24:72.22:0,72,860	1/1:2,20:22:54.18:748,54,0	1/1:1,30:31:84.28:1171,84,0	0/0:27,0:27:72.18:0,72,829	0/0:32,0:32:93.28:0,93,1115	0/0:35,0:35:93.28:0,93,1105	1/1:3,32:35:90.30:1258,90,0	1/1:0,19:19:54.18:755,54,0	0/0:15,0:15:42.09:0,42,473	0/0:22,0:22:60.16:0,60,704	0/0:22,0:22:66.20:0,66,792	1/1:5,24:29:69.19:939,69,0	1/1:1,17:18:51.17:704,51,0	1/1:1,26:27:66.22:923,66,0	0/0:27,0:27:78.22:0,78,913	0/0:27,0:27:78.21:0,78,910	0/0:30,0:30:84.26:0,84,1007	0/0:2,0:2:6.02:0,6,72
chr10	51929718	.	G	GAGAGAC	3786.57	PASS	AB=0.907;AC=20;AF=0.357;AN=56;BaseQRankSum=7.818;DP=801;FS=14.937;HRun=0;HaplotypeScore=193.0940;InbreedingCoeff=0.6583;MQ=61.87;MQ0=12;MQRankSum=-1.188;QD=10.32;ReadPosRankSum=-0.443;VQSLOD=1.5374;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:22,29:54:5.14:74,0,5	1/1:2,7:10:11.98:365,12,0	0/0:25,0:20:0.89:0,1,2	0/1:32,0:16:0:0,0,0	0/0:32,0:32:57.18:0,57,1041	0/0:35,0:35:69.17:0,69,1244	0/0:27,0:26:54.15:0,54,955	0/0:49,0:43:89.74:0,90,1088	0/0:23,0:23:42.12:0,42,760	0/0:23,0:23:45.12:0,45,774	0/0:24,0:23:48.15:0,48,942	1/1:32,0:32:10.45:447,10,0	1/1:27,0:28:3.05:579,3,0	0/0:20,0:20:42.09:0,42,731	1/1:7,34:42:6.02:167,6,0	1/1:9,27:37:18.06:562,18,0	0/1:21,0:21:11.71:206,0,12	1/1:29,0:29:23.89:590,24,0	0/0:21,0:19:27.05:0,27,472	0/0:30,0:30:60.19:0,60,1143	0/0:32,0:31:69.19:0,69,1207	0/1:25,0:25:7.35:248,0,7	1/1:16,0:16:0.57:58,1,0	1/1:39,0:40:25.50:489,25,0	0/0:24,0:24:38.81:0,39,664	0/0:36,0:35:20.46:0,20,1001	0/0:27,0:27:63.14:0,63,1151	0/0:6,0:5:15.01:0,15,226
chr10	51929736	.	CAG	C	1669.22	PASS	AB=0.838;AC=11;AF=0.196;AN=56;BaseQRankSum=7.410;DP=742;FS=10.991;HRun=0;HaplotypeScore=138.4223;InbreedingCoeff=-0.2470;MQ=55.29;MQ0=11;MQRankSum=0.722;QD=4.98;ReadPosRankSum=4.295;VQSLOD=2.0592;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:48,0:48:4.66:5,0,256	0/1:13,0:13:28.78:29,0,190	0/0:6,0:5:2.99:0,3,24	0/0:12,0:5:8.97:0,9,85	0/0:30,0:30:75.24:0,75,1229	0/0:32,0:32:81.26:0,81,1392	0/0:27,0:26:66.19:0,66,1086	0/0:55,0:49:99:0,135,2193	0/0:20,0:20:54.17:0,54,894	0/0:25,0:25:69.19:0,69,1139	0/0:20,0:20:57.18:0,57,983	0/1:21,16:37:99:274,0,311	0/1:24,6:30:99:261,0,402	0/0:20,0:20:60.17:0,60,975	0/1:42,0:42:9.09:9,0,295	0/1:36,0:36:28.90:29,0,345	0/1:10,5:15:38.22:182,0,38	0/1:18,11:28:99:444,0,267	0/0:18,0:16:33.10:0,33,533	0/0:24,0:24:69.22:0,69,1171	0/0:34,0:33:90.26:0,90,1519	0/1:15,10:25:99:327,0,120	0/1:14,6:20:99:131,0,198	0/1:25,15:40:99:123,0,238	0/0:20,0:20:48.14:0,48,810	0/0:31,0:30:75.24:0,75,1263	0/0:28,0:28:78.21:0,78,1330	0/0:5,0:5:15.03:0,15,204
chr10	51930484	.	C	CTT	853.22	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-2.466;DP=614;FS=10.215;HRun=10;HaplotypeScore=75.6771;InbreedingCoeff=0.8431;MQ=59.99;MQ0=9;MQRankSum=-0.454;QD=21.88;ReadPosRankSum=2.637;VQSLOD=2.1808;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,31:39:65.71:948,66,0	0/0:9,0:9:23.59:0,24,242	0/0:27,0:5:4.77:0,5,33	0/0:15,0:6:11.73:0,12,94	0/0:28,0:28:53.96:0,54,536	0/0:20,0:20:27.29:0,27,484	0/0:13,0:13:27.01:0,27,267	0/0:21,0:23:41.44:0,41,378	0/0:17,0:17:42.04:0,42,413	0/0:17,0:18:26.70:0,27,319	0/0:16,0:16:42.04:0,42,414	0/0:17,0:19:38.50:0,38,416	0/0:18,0:18:33.04:0,33,335	0/0:25,0:26:62.77:0,63,601	0/0:27,0:27:60.02:0,60,592	0/0:9,0:10:20.78:0,21,266	0/0:35,0:40:68.20:0,68,836	0/0:24,0:24:59.82:0,60,591	0/0:25,0:27:29.52:0,30,325	0/0:22,0:24:54.73:0,55,505	0/0:17,0:17:23.55:0,24,243	0/0:22,0:22:56.75:0,57,547	0/0:16,0:17:38.30:0,38,357	0/0:24,0:26:65.56:0,66,615	0/0:27,0:27:66.09:0,66,664	0/0:26,0:25:44.71:0,45,433	0/0:24,0:25:56.82:0,57,559	0/0:11,0:9:17.95:0,18,170
chr10	51930759	.	GTACTGCTGTGATCCT	G	13896.75	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=15.597;DP=763;FS=4.699;HRun=0;HaplotypeScore=309.7816;InbreedingCoeff=0.9955;MQ=91.60;MQ0=0;MQRankSum=-16.123;QD=89.08;ReadPosRankSum=5.604;VQSLOD=4.1297;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:56:99:0,163,10436	0/0:16,0:16:42.14:0,42,2769	0/0:34,0:34:81.09:0,81,4286	0/0:41,0:41:99:0,120,6667	0/0:24,0:24:72.25:0,72,5138	0/0:26,0:26:75.26:0,75,5172	0/0:26,0:26:78.27:0,78,5424	0/0:32,0:32:87.30:0,87,5137	0/0:19,0:19:51.16:0,51,3386	0/0:29,0:29:84.29:0,84,6007	0/0:23,0:23:63.22:0,63,4090	1/1:0,29:29:69.24:3077,69,0	1/1:1,31:32:75.26:3344,75,0	0/0:32,0:32:96.33:0,96,6259	0/0:35,0:35:99:0,105,6851	0/0:33,0:33:96.33:0,96,6898	1/1:1,20:21:33.11:1471,33,0	1/1:0,18:18:30.10:1323,30,0	0/0:18,0:18:51.17:0,51,2643	0/0:28,0:28:81.28:0,81,5637	0/0:32,0:32:96.33:0,96,6552	1/1:1,16:17:39.13:1739,39,0	1/1:1,21:22:48.16:2140,48,0	1/1:1,16:17:18.06:803,18,0	0/0:26,0:26:78.27:0,78,5389	0/0:33,0:33:98.35:0,98,6497	0/0:38,0:38:99:0,111,7762	0/0:6,0:6:15.05:0,15,1096
chr10	51931205	.	A	AT	1039.02	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=-7.003;DP=587;FS=14.618;HRun=6;HaplotypeScore=52.3091;InbreedingCoeff=0.6801;MQ=72.19;MQ0=0;MQRankSum=0.064;QD=25.98;ReadPosRankSum=1.748;VQSLOD=2.5204;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,31:32:90.29:1132,90,0	0/0:12,0:12:36.08:0,36,367	0/0:11,0:11:30.03:0,30,293	0/1:8,0:8:7.95:8,0,87	0/0:34,0:34:99:0,102,1034	0/0:23,0:23:66.12:0,66,659	0/0:10,0:10:24.05:0,24,245	0/0:33,0:33:78.16:0,78,791	0/0:15,0:15:42.08:0,42,422	0/0:26,0:26:72.16:0,72,735	0/0:18,0:18:48.11:0,48,490	0/0:25,0:25:66.13:0,66,666	0/0:19,0:19:48.11:0,48,490	0/0:17,0:17:42.09:0,42,429	0/0:19,0:19:48.11:0,48,490	0/0:23,0:23:60.12:0,60,606	0/0:17,0:17:42.09:0,42,429	0/0:23,0:23:60.13:0,60,612	0/0:18,0:18:45.10:0,45,459	0/0:21,0:21:60.11:0,60,598	0/0:16,0:16:45.08:0,45,451	0/0:27,0:27:72.14:0,72,727	0/0:20,0:20:57.13:0,57,581	0/0:24,0:24:69.13:0,69,696	0/0:35,0:35:99:0,99,998	0/0:26,0:26:63.13:0,63,643	0/0:27,0:27:78.18:0,78,795	0/0:8,0:8:24.05:0,24,245
chr10	51932502	.	T	TAA	6076.95	PASS	AB=0.591;AC=21;AF=0.375;AN=56;BaseQRankSum=17.021;DP=638;FS=0.344;HRun=4;HaplotypeScore=93.0691;InbreedingCoeff=0.8983;MQ=78.80;MQ0=0;MQRankSum=-3.261;QD=26.54;ReadPosRankSum=0.982;VQSLOD=3.3009;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,0:26:65.45:471,65,0	0/1:4,9:13:15.94:327,0,16	0/0:20,0:20:36.94:0,37,569	0/0:14,0:14:34.92:0,35,437	0/0:34,0:34:96.31:0,96,1279	0/0:36,0:36:99:0,99,1304	0/0:15,0:15:45.15:0,45,600	0/0:43,0:43:99:0,111,1477	0/0:26,0:26:75.24:0,75,997	0/0:18,0:17:48.15:0,48,628	0/0:16,0:16:45.15:0,45,599	1/1:1,14:15:34:553,34,0	1/1:3,20:26:51.44:736,51,0	0/0:19,0:19:57.16:0,57,729	1/1:6,9:17:23.97:312,24,0	1/1:3,16:21:8.14:693,8,0	1/1:1,10:11:18.06:300,18,0	1/1:3,17:22:45.47:612,45,0	0/0:21,0:20:57.18:0,57,756	0/0:28,0:28:78.25:0,78,1039	0/0:22,0:22:63.19:0,63,820	1/1:8,28:38:85.22:1137,85,0	1/1:4,24:31:58.79:783,59,0	1/1:2,7:9:9.92:153,10,0	0/0:31,0:31:87.29:0,87,1160	0/0:27,0:27:72.21:0,72,933	0/0:35,0:35:93.30:0,93,1239	0/0:4,0:4:9.03:0,9,120
chr10	51932919	.	TTGC	T	11016.19	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=13.873;DP=626;FS=1.970;HRun=0;HaplotypeScore=102.1960;InbreedingCoeff=0.9908;MQ=61.72;MQ0=3;MQRankSum=1.164;QD=28.54;ReadPosRankSum=3.241;VQSLOD=5.0373;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,27:40:68.97:984,69,0	1/1:0,5:5:15.05:215,15,0	0/0:30,0:19:35.40:0,35,474	0/0:26,0:22:15.54:0,16,421	0/0:17,0:17:29.94:0,30,570	0/0:19,0:19:42.08:0,42,695	0/0:22,0:22:54.17:0,54,1021	1/1:12,27:37:75.17:967,75,0	0/0:22,0:22:54.16:0,54,1031	0/0:22,0:22:54.17:0,54,999	0/0:19,0:19:25.15:0,25,633	1/1:23,0:23:60.20:879,60,0	1/1:24,0:24:60.14:821,60,0	0/0:15,0:15:39.12:0,39,755	1/1:5,22:27:42.14:618,42,0	1/1:5,18:23:36.08:530,36,0	1/1:21,0:21:48.06:589,48,0	1/1:10,0:10:24.06:333,24,0	1/1:3,18:21:54.14:736,54,0	1/1:3,21:24:63.07:827,63,0	1/1:12,37:49:60.20:878,60,0	1/1:16,0:16:42.12:581,42,0	1/1:27,0:27:69.20:962,69,0	1/1:21,0:21:57.11:708,57,0	0/0:16,0:16:33.11:0,33,672	0/0:28,0:28:54.18:0,54,1052	1/1:4,12:16:29.70:388,30,0	0/0:4,0:4:12.04:0,12,248
chr10	51932930	.	GC	G	1706.99	PASS	AB=0.749;AC=12;AF=0.214;AN=56;BaseQRankSum=14.511;DP=587;FS=2.186;HRun=1;HaplotypeScore=108.2462;InbreedingCoeff=0.5300;MQ=64.46;MQ0=3;MQRankSum=-1.503;QD=9.75;ReadPosRankSum=7.547;VQSLOD=1.2580;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:33:16.49:16,0,156	0/0:8,0:8:11.04:0,11,97	0/0:24,1:17:35.68:0,36,696	0/0:22,0:18:51.14:0,51,707	0/0:14,0:14:35.90:0,36,563	0/0:22,0:22:63.20:0,63,957	0/0:22,0:22:66.21:0,66,1014	0/0:35,0:33:44.91:0,45,437	0/0:21,0:21:63.21:0,63,995	0/0:21,0:21:60.20:0,60,949	0/0:16,0:16:45.13:0,45,670	1/1:5,17:22:42.43:411,42,0	1/1:7,14:21:24.59:339,25,0	0/0:17,0:17:51.17:0,51,794	0/0:26,0:26:12.04:0,12,170	0/0:21,0:21:9.02:0,9,126	0/1:13,10:23:53.04:158,0,53	0/1:5,7:12:43.72:113,0,44	0/0:20,0:20:14.89:0,15,129	0/0:25,0:25:26.04:0,26,270	0/0:40,0:40:5.05:0,5,49	0/1:9,9:18:19.20:205,0,19	1/1:6,19:25:24.37:396,24,0	1/1:12,9:21:22:243,22,0	0/0:13,0:13:39.13:0,39,613	0/0:25,0:25:65.89:0,66,1002	0/0:15,0:15:15.01:0,15,160	0/0:4,0:4:12.04:0,12,192
chr10	51932932	.	TGC	T	2838.95	PASS	AB=0.912;AC=21;AF=0.375;AN=56;BaseQRankSum=17.630;DP=576;FS=1.207;HRun=0;HaplotypeScore=113.7162;InbreedingCoeff=0.1799;MQ=64.44;MQ0=3;MQRankSum=-1.613;QD=7.82;ReadPosRankSum=10.686;VQSLOD=1.9030;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:33:66.13:66,0,137	0/1:8,0:8:4.53:5,0,100	0/0:21,0:16:46.97:0,47,798	0/0:22,0:18:51.14:0,51,784	0/0:14,0:14:35.71:0,36,682	0/0:19,0:19:57.19:0,57,1037	0/0:22,0:22:66.22:0,66,1249	0/1:36,0:34:12.03:12,0,305	0/0:20,0:20:60.21:0,60,1192	0/0:21,0:21:60.20:0,60,1168	0/0:18,0:18:51.17:0,51,893	1/1:5,17:22:50.82:565,51,0	1/1:7,14:22:26.99:470,27,0	0/0:16,0:16:48.15:0,48,883	0/1:25,0:25:38.63:39,0,82	1/1:18,0:18:21.56:62,22,0	0/1:12,10:22:31.44:252,0,31	0/1:6,7:13:53.29:160,0,53	0/1:20,0:20:36.37:36,0,79	0/1:25,0:25:29.97:30,0,172	0/1:39,0:39:35.68:58,0,36	0/1:11,9:20:18.56:300,0,19	1/1:6,19:25:41.32:567,41,0	1/1:12,9:21:41.16:389,41,0	0/0:12,0:12:36.12:0,36,710	0/0:23,0:23:66.21:0,66,1235	0/1:14,0:14:15.36:15,0,94	0/0:4,0:4:12.04:0,12,244
chr10	51933095	.	CCA	C	2563.43	PASS	AB=1.000;AC=25;AF=0.463;AN=54;BaseQRankSum=5.752;DP=261;FS=3.262;HRun=0;HaplotypeScore=44.9981;InbreedingCoeff=0.5766;MQ=81.94;MQ0=1;MQRankSum=-1.182;QD=17.68;ReadPosRankSum=-1.381;VQSLOD=2.8761;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:48.16:0,48,824	1/1:2,0:2:2.90:16,3,0	0/0:13,0:8:24.05:0,24,350	0/1:14,0:11:0.80:1,0,133	0/0:8,0:8:24.08:0,24,406	0/0:8,0:8:24.08:0,24,423	0/0:11,0:11:33.09:0,33,525	0/1:13,0:13:30.68:90,0,31	0/0:13,0:13:39.05:0,39,620	0/0:6,0:6:18.06:0,18,316	0/0:14,0:14:36.11:0,36,605	1/1:5,3:8:6.28:235,6,0	1/1:1,6:7:12.04:179,12,0	0/0:5,0:5:12.03:0,12,211	1/1:8,0:8:9.98:35,10,0	1/1:7,0:7:9.98:35,10,0	1/1:0,16:16:39.13:575,39,0	1/1:0,8:8:18.06:269,18,0	./.	0/1:12,0:12:73.36:93,0,73	0/1:10,0:10:19.27:19,0,45	1/1:0,14:14:30.10:447,30,0	1/1:0,17:17:39.13:572,39,0	1/1:1,4:5:12.04:179,12,0	0/0:10,0:10:30.10:0,30,529	0/0:10,0:10:30.10:0,30,518	0/1:4,0:4:16.83:17,0,40	0/0:2,0:2:6.02:0,6,104
chr10	51933096	.	CA	C	1705.69	PASS	AB=0.955;AC=26;AF=0.481;AN=54;BaseQRankSum=8.083;DP=262;FS=4.974;HRun=1;HaplotypeScore=43.1898;InbreedingCoeff=0.7673;MQ=80.38;MQ0=1;MQRankSum=-1.638;QD=12.92;ReadPosRankSum=-2.185;VQSLOD=1.4911;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:48.14:0,48,639	1/1:2,0:2:2.90:16,3,0	0/0:12,1:8:24.04:0,24,287	0/0:12,1:10:0.33:0,0,111	0/0:8,0:8:24.04:0,24,312	0/0:9,0:9:27.08:0,27,360	0/0:11,0:11:33.08:0,33,426	1/1:13,1:14:11.01:178,11,0	0/0:13,0:13:39.05:0,39,502	0/0:6,0:6:18.06:0,18,249	0/0:14,0:14:36.10:0,36,484	1/1:7,1:8:20.74:146,21,0	1/1:6,1:7:11.81:75,12,0	0/0:4,0:4:12.04:0,12,167	1/1:0,8:8:12.04:167,12,0	1/1:0,7:7:11.81:167,12,0	1/1:16,0:16:38.43:244,38,0	1/1:8,0:8:17.74:112,18,0	./.	1/1:9,3:12:1.13:198,1,0	0/1:9,1:10:1.26:77,0,1	1/1:14,0:14:29.50:190,29,0	1/1:17,0:17:38.36:240,38,0	1/1:4,1:5:11.82:75,12,0	0/0:10,0:10:30.10:0,30,419	0/0:11,0:11:30.09:0,30,404	0/1:4,0:4:3.51:21,0,4	0/0:2,0:2:6.02:0,6,82
chr10	51936938	.	TTACTACTACTACTAC	T	1408.52	PASS	AB=1.000;AC=19;AF=0.352;AN=54;BaseQRankSum=4.196;DP=347;FS=0.000;HRun=0;HaplotypeScore=119.0633;InbreedingCoeff=0.6487;MQ=60.75;MQ0=5;MQRankSum=-1.049;QD=10.67;ReadPosRankSum=-0.197;VQSLOD=2.1505;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:18:5.85:0,6,184	0/0:10,0:10:15.05:0,15,337	0/0:10,0:6:3.01:0,3,47	0/0:12,0:8:0:0,0,0	0/0:19,0:19:27.09:0,27,1131	0/0:16,0:16:30.04:0,30,1381	0/0:10,0:10:12.04:0,12,470	1/1:27,0:27:9.02:137,9,0	0/0:10,0:10:21.05:0,21,807	0/0:9,0:9:9.03:0,9,370	0/0:10,0:10:21.07:0,21,976	1/1:10,0:10:3.01:114,3,0	1/1:11,0:11:3.01:114,3,0	0/0:6,0:6:15.05:0,15,615	0/0:13,0:13:24.07:0,24,805	0/0:16,0:16:15.05:0,15,648	0/1:19,0:19:85.51:86,0,430	0/0:5,0:17:5.95:0,6,109	1/1:5,4:8:12.01:191,12,0	1/1:6,8:14:2.98:21,3,0	./.	1/1:4,5:9:8.99:100,9,0	1/1:9,0:9:1.97:111,2,0	1/1:9,0:9:6.02:123,6,0	0/0:18,0:18:36.12:0,36,1800	0/0:9,0:8:9.03:0,9,434	1/1:15,0:15:27.04:587,27,0	0/0:9,0:8:24.08:0,24,1342
chr10	51936965	.	CTACTACTACTACTACTAT	C	1620.90	PASS	AB=1.000;AC=16;AF=0.296;AN=54;BaseQRankSum=3.785;DP=253;FS=0.000;HRun=0;HaplotypeScore=94.6155;InbreedingCoeff=0.4419;MQ=52.20;MQ0=4;MQRankSum=-3.370;QD=16.21;ReadPosRankSum=-1.324;VQSLOD=1.6588;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:14:6.49:0,6,206	0/0:9,0:9:15.05:0,15,401	0/0:3,0:1:3.01:0,3,47	0/0:4,0:1:0:0,0,0	0/0:13,0:12:29.11:0,29,1195	0/0:14,0:14:39.59:0,40,1709	0/0:5,0:5:15.01:0,15,489	0/1:23,0:17:73.24:212,0,73	0/0:7,0:7:21.05:0,21,876	0/0:6,0:6:12.04:0,12,399	0/0:8,0:8:24.07:0,24,1068	1/1:0,8:8:3.01:155,3,0	1/1:0,10:10:3.01:155,3,0	0/0:5,0:5:15.05:0,15,714	0/0:12,0:12:24.07:0,24,848	0/0:10,0:10:15.94:0,16,704	0/1:17,0:17:40.67:41,0,596	0/0:15,0:15:12.04:0,12,251	0/1:6,0:5:28.96:154,0,29	0/1:9,0:9:14.94:15,0,42	./.	1/1:5,0:5:8.99:100,9,0	1/1:0,6:6:2.14:152,2,0	1/1:7,0:7:11.32:238,11,0	0/0:14,0:14:39.13:0,39,2120	0/0:4,0:3:9.03:0,9,484	1/1:9,0:9:27.04:566,27,0	0/0:9,0:8:24.08:0,24,1576
chr10	51936977	.	CTACTAT	C	288.88	PASS	AB=1.000;AC=16;AF=0.320;AN=50;BaseQRankSum=5.906;DP=239;FS=0.000;HRun=0;HaplotypeScore=53.4352;InbreedingCoeff=0.2498;MQ=52.67;MQ0=2;MQRankSum=-2.664;QD=3.04;ReadPosRankSum=2.773;VQSLOD=0.9409;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,11:14:2.77:69,3,0	0/1:9,0:9:3.41:3,0,20	./.	0/0:3,0:2:6.01:0,6,60	0/0:13,0:12:26.94:0,27,259	0/0:13,0:13:36.48:0,36,532	0/0:4,0:4:11.95:0,12,94	0/0:29,0:23:47.77:0,48,392	0/1:7,0:7:2.86:3,0,219	0/0:3,0:3:9.01:0,9,87	0/0:11,0:11:32.98:0,33,323	1/1:8,0:8:3.01:51,3,0	1/1:10,0:10:3.01:51,3,0	0/0:5,0:5:15:0,15,152	0/0:10,0:10:17.20:0,17,132	0/1:8,0:8:26.45:26,0,104	0/1:14,0:14:79.81:80,0,105	0/0:16,0:16:8.90:0,9,64	0/1:8,0:7:11.76:12,0,62	0/0:10,0:10:5.94:0,6,43	./.	./.	1/1:6,0:6:2.60:49,3,0	1/1:6,0:6:4.78:38,5,0	0/0:11,0:11:33.03:0,33,582	0/0:2,0:2:6.01:0,6,135	0/1:5,0:5:12.06:51,0,12	0/0:9,0:8:24.03:0,24,522
chr10	51936980	.	CTATTATTATTAT	C	481.17	PASS	AB=1.000;AC=14;AF=0.280;AN=50;BaseQRankSum=2.780;DP=237;FS=0.000;HRun=0;HaplotypeScore=73.7757;InbreedingCoeff=0.4439;MQ=52.74;MQ0=2;MQRankSum=-2.318;QD=7.52;ReadPosRankSum=2.487;VQSLOD=1.0986;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:12:7.51:0,8,67	1/1:2,7:9:9.03:234,9,0	./.	0/0:3,0:2:6.02:0,6,244	0/0:12,0:11:9.03:0,9,304	0/0:13,0:13:28.91:0,29,1134	0/0:4,0:4:3.01:0,3,79	0/0:31,0:25:57.20:0,57,1875	0/0:7,0:7:12.04:0,12,463	0/0:3,0:3:3.01:0,3,116	0/0:11,0:11:15.05:0,15,530	1/1:8,0:8:3.01:34,3,0	1/1:10,0:10:3.01:34,3,0	0/0:5,0:5:3.01:0,3,165	1/1:5,5:10:3.01:66,3,0	1/1:8,0:8:5.85:195,6,0	0/0:13,0:13:23.32:0,23,727	0/0:17,0:17:15.04:0,15,369	0/1:8,0:7:7.04:7,0,196	0/0:10,0:10:6.02:0,6,172	./.	./.	1/1:6,0:6:3.01:42,3,0	0/0:4,0:4:8.24:0,8,121	0/0:11,0:11:18.06:0,18,862	0/0:2,0:2:3.01:0,3,177	0/1:5,0:5:12.39:12,0,90	0/0:9,0:8:24.08:0,24,1002
chr10	51937373	.	C	CATGCATGCATGCATGCATGG	8250.49	PASS	AB=1.000;AC=11;AF=0.204;AN=54;BaseQRankSum=-1.676;DP=729;FS=0.000;HRun=0;HaplotypeScore=363.1594;InbreedingCoeff=0.8390;MQ=64.82;MQ0=0;MQRankSum=-8.667;QD=43.20;ReadPosRankSum=-5.488;VQSLOD=1.5349;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:64,0:64:99:0,156,6242	0/0:13,0:13:30.10:0,30,1457	./.	0/0:15,0:16:2.68:0,3,12	0/0:20,0:20:45.15:0,45,1859	0/0:26,0:26:63.19:0,63,2642	0/1:32,0:32:7.56:8,0,1857	1/1:42,0:42:81.17:2877,81,0	0/0:31,0:31:78.22:0,78,3344	0/0:28,0:28:78.24:0,78,3397	0/0:17,0:17:48.13:0,48,2066	0/0:36,0:36:93.28:0,93,4078	0/0:34,0:34:87.23:0,87,3691	0/0:26,0:26:69.22:0,69,3254	0/0:42,0:42:99:0,120,5179	0/0:24,0:24:63.22:0,63,2904	0/0:22,0:22:48.13:0,48,1805	0/0:10,0:10:21.05:0,21,854	1/1:2,7:24:65.79:1976,66,0	1/1:5,14:22:15.05:1362,15,0	1/1:38,0:38:17.58:503,18,0	0/0:18,0:18:45.13:0,45,2068	0/0:17,0:17:48.10:0,48,1714	0/0:29,0:29:72.08:0,72,2335	0/0:19,0:19:48.16:0,48,2034	0/0:28,0:28:78.24:0,78,3397	1/1:12,10:33:21.03:1525,21,0	0/0:5,0:5:6.02:0,6,325
chr10	51938249	.	A	AT	3673.99	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-10.569;DP=682;FS=0.395;HRun=6;HaplotypeScore=63.4497;InbreedingCoeff=0.9989;MQ=71.31;MQ0=0;MQRankSum=-1.428;QD=32.23;ReadPosRankSum=-2.861;VQSLOD=2.8939;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,111,1124	0/0:12,0:12:33.06:0,33,330	0/0:14,0:14:36.05:0,36,349	0/0:12,0:12:27.02:0,27,261	0/0:37,0:37:99:0,102,1034	0/0:28,0:28:81.18:0,81,826	0/0:42,0:42:99:0,111,1113	1/1:2,28:30:81.23:992,81,0	0/0:22,0:22:63.14:0,63,643	0/0:39,0:39:99:0,105,1062	0/0:23,0:23:60.10:0,60,603	0/0:21,0:21:57.13:0,57,580	0/0:33,0:33:96.22:0,96,979	0/0:16,0:16:48.10:0,48,483	0/0:33,0:33:96.20:0,96,972	0/0:28,0:28:81.17:0,81,820	0/0:25,0:25:59.94:0,60,692	0/0:28,0:28:66.11:0,66,663	1/1:2,9:11:27.09:340,27,0	1/1:1,28:29:78.17:946,78,0	1/1:2,16:18:45.14:566,45,0	0/0:13,0:13:36.07:0,36,361	0/0:25,0:25:69.10:0,69,693	0/0:17,0:17:45.10:0,45,459	0/0:25,0:25:72.16:0,72,735	0/0:24,0:24:66.14:0,66,673	1/1:0,26:25:66.21:830,66,0	0/0:9,0:9:24.05:0,24,245
chr10	51939041	.	A	AT	2771.35	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-0.461;DP=769;FS=4.205;HRun=4;HaplotypeScore=96.1546;InbreedingCoeff=0.9995;MQ=96.75;MQ0=1;MQRankSum=-4.425;QD=35.53;ReadPosRankSum=1.957;VQSLOD=3.8027;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,120,1361	1/1:1,13:14:33.11:452,33,0	0/0:36,0:36:87.22:0,87,956	0/0:39,0:39:99:0,102,1137	0/0:27,0:27:75.20:0,75,841	0/0:22,0:22:63.18:0,63,715	0/0:26,0:26:75.18:0,75,829	0/0:37,0:37:90.25:0,90,1021	0/0:20,0:20:60.17:0,60,681	0/0:39,0:39:99:0,108,1212	0/0:14,0:14:39.10:0,39,433	0/0:32,0:32:90.26:0,90,1021	0/0:26,0:26:75.19:0,75,838	0/0:34,0:34:96.26:0,96,1078	1/1:2,31:33:90.30:1231,90,0	1/1:1,30:31:90.30:1231,90,0	0/0:40,0:40:99:0,117,1327	0/0:18,0:18:51.13:0,51,566	0/0:16,0:16:39.11:0,39,442	0/0:20,0:20:54.14:0,54,602	0/0:53,0:52:99:0,141,1589	0/0:21,0:21:60.16:0,60,671	0/0:22,0:22:57.14:0,57,637	0/0:33,0:33:90.23:0,90,1002	0/0:16,0:16:45.13:0,45,510	0/0:27,0:27:75.21:0,75,851	0/0:16,0:16:48.14:0,48,544	0/0:13,0:13:27.07:0,27,306
chr10	51939962	.	ATG	A	1350.33	PASS	AB=0.936;AC=14;AF=0.259;AN=54;BaseQRankSum=6.211;DP=621;FS=1.242;HRun=0;HaplotypeScore=102.2169;InbreedingCoeff=0.7120;MQ=68.89;MQ0=10;MQRankSum=2.015;QD=7.46;ReadPosRankSum=2.582;VQSLOD=3.5101;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:32:25.57:126,26,0	0/0:11,0:11:9:0,9,77	0/0:22,0:17:6.02:0,6,89	./.	0/0:17,0:16:24.08:0,24,353	0/0:20,0:20:30.05:0,30,379	0/0:16,1:17:4.15:0,4,413	0/0:30,0:29:23.75:0,24,164	0/0:23,0:23:8.93:0,9,507	0/0:18,0:21:51.08:0,51,626	0/0:20,0:20:33.07:0,33,433	1/1:10,13:23:24.06:265,24,0	1/1:13,8:21:15.04:165,15,0	0/0:22,0:22:33.06:0,33,451	0/0:31,0:36:8.85:0,9,60	0/0:27,0:31:8.99:0,9,75	0/0:25,0:24:11.88:0,12,95	0/0:10,0:10:10.99:0,11,90	0/0:15,0:14:17.67:0,18,166	0/0:21,0:21:8.01:0,8,52	0/0:18,0:17:2.99:0,3,24	1/1:8,10:18:15.04:166,15,0	1/1:10,14:22:33.09:364,33,0	1/1:17,12:30:41.78:425,42,0	0/1:20,1:21:0.06:0,0,395	0/0:28,0:28:39.08:0,39,519	0/0:27,0:26:38.88:0,39,368	0/1:9,1:11:18.13:18,0,147
chr10	51940377	.	TCA	T	380.14	PASS	AB=0.923;AC=19;AF=0.365;AN=52;BaseQRankSum=4.515;DP=576;FS=30.262;HRun=0;HaplotypeScore=89.4562;InbreedingCoeff=-0.0460;MQ=57.28;MQ0=18;MQRankSum=0.997;QD=1.28;ReadPosRankSum=4.241;VQSLOD=0.0120;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:23,1:37:3.69:104,4,0	0/1:6,0:6:15.37:15,0,56	./.	./.	0/1:12,6:17:23.75:24,0,48	1/1:13,6:18:2.68:32,3,0	0/1:14,2:16:50.23:50,0,119	0/0:20,0:20:5.03:0,5,34	0/0:14,0:13:26.86:0,27,337	0/0:12,0:12:6.89:0,7,70	0/0:9,0:9:9.34:0,9,77	0/1:14,2:16:28.03:28,0,109	0/1:17,1:18:8.57:9,0,257	0/0:7,0:15:8.99:0,9,76	0/1:20,2:22:32.18:32,0,292	0/1:19,1:19:2.68:3,0,420	1/1:11,0:22:17.04:84,17,0	1/1:14,0:21:8.52:42,9,0	0/0:17,0:17:9.88:0,10,77	0/1:16,0:15:41.80:42,0,49	0/0:27,0:26:7.25:0,7,59	0/0:7,0:7:6.28:0,6,34	0/1:16,3:18:20.58:21,0,122	0/1:26,0:26:45.85:46,0,229	0/1:17,0:17:3.31:3,0,218	0/0:27,0:27:1.01:0,1,176	0/0:23,0:22:11.89:0,12,284	0/0:8,0:8:9.92:0,10,132
chr10	51941236	.	A	AT	3976.49	PASS	AB=0.829;AC=22;AF=0.393;AN=56;BaseQRankSum=-7.206;DP=637;FS=0.357;HRun=12;HaplotypeScore=68.5709;InbreedingCoeff=0.5868;MQ=63.53;MQ0=1;MQRankSum=1.937;QD=12.58;ReadPosRankSum=-1.970;VQSLOD=3.0890;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:73.25:0,73,545	0/0:7,0:7:20.88:0,21,153	0/1:19,0:14:10.83:11,0,16	0/1:8,0:4:8.51:9,0,9	0/0:32,1:33:51.26:0,51,534	0/0:19,0:19:38.71:0,39,284	0/1:13,2:15:25.56:26,0,162	1/1:13,19:31:44.59:547,45,0	0/0:21,1:23:23.50:0,24,327	0/0:26,0:26:32.17:0,32,313	0/0:15,1:17:11.62:0,12,239	1/1:8,12:21:44.81:404,45,0	1/1:6,22:29:12.12:355,12,0	0/1:21,0:21:3.77:4,0,257	0/0:21,0:21:47.66:0,48,350	0/0:20,0:21:49.74:0,50,356	0/0:4,0:32:44.60:0,45,131	0/0:1,0:25:40.74:0,41,120	1/1:11,12:23:22.88:345,23,0	1/1:5,21:26:54.02:515,54,0	0/1:5,7:12:3.87:128,0,4	1/1:3,18:23:48.75:444,49,0	0/1:10,17:28:16.32:319,0,16	1/1:5,18:24:19.99:343,20,0	0/0:25,1:27:25.74:0,26,331	0/0:32,2:35:9.24:0,9,385	1/1:7,24:31:38.18:528,38,0	0/0:2,0:2:5.97:0,6,44
chr10	51943424	.	C	CGTGTGT	3007.92	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=6.683;DP=690;FS=2.917;HRun=0;HaplotypeScore=166.7975;InbreedingCoeff=0.7262;MQ=58.54;MQ0=13;MQRankSum=-4.961;QD=10.13;ReadPosRankSum=-5.778;VQSLOD=0.8523;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:37,0:36:99:140,0,366	1/1:3,0:8:2.46:79,2,0	0/1:30,0:21:2.09:2,0,302	0/0:38,0:24:38.84:0,39,624	0/0:30,0:30:81.17:0,81,1371	0/0:21,0:21:54.15:0,54,1023	0/0:34,0:34:93.28:0,93,1802	1/1:38,0:37:40.79:721,41,0	0/0:23,0:23:63.07:0,63,1159	0/0:27,0:27:72.24:0,72,1402	0/0:14,0:13:36.11:0,36,665	0/0:21,0:20:54.09:0,54,924	0/0:33,0:31:90.23:0,90,1631	0/0:27,0:27:72.09:0,72,1112	1/1:23,1:25:18.49:280,18,0	1/1:15,3:20:18.52:449,19,0	1/1:22,0:22:11.11:141,11,0	1/1:5,5:11:6.96:179,7,0	0/1:22,0:19:17.10:285,0,17	1/1:20,0:20:14.52:215,15,0	1/1:36,0:36:5.75:59,6,0	0/0:24,0:24:60.15:0,60,1144	0/0:18,0:17:33.11:0,33,633	0/0:25,0:25:38.68:0,39,1035	0/0:26,0:26:60.11:0,60,1018	0/0:22,0:22:60.16:0,60,1092	1/1:27,0:27:35.87:659,36,0	0/0:10,0:8:15.05:0,15,269
chr10	51943435	.	G	GTGTC	1722.79	PASS	AB=0.942;AC=13;AF=0.232;AN=56;BaseQRankSum=8.871;DP=691;FS=2.151;HRun=0;HaplotypeScore=138.4359;InbreedingCoeff=0.2456;MQ=52.94;MQ0=12;MQRankSum=-6.884;QD=6.95;ReadPosRankSum=-1.110;VQSLOD=2.5853;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:39,0:38:99:117,0,192	0/1:7,0:7:11.97:29,0,12	0/0:26,0:11:14.91:0,15,176	0/0:32,0:19:48.05:0,48,504	0/0:30,0:30:78.08:0,78,1071	0/0:20,0:20:48.09:0,48,683	0/0:35,0:35:87.29:0,87,1273	0/1:36,0:35:24.54:438,0,25	0/0:25,0:25:69.09:0,69,1014	0/0:28,0:28:84.20:0,84,1237	0/0:16,0:15:40.61:0,41,579	0/0:20,0:19:51.05:0,51,765	0/0:32,0:30:86.44:0,86,1155	0/0:28,0:28:71.70:0,72,897	0/1:25,0:25:23.98:24,0,143	0/1:20,0:20:81.49:81,0,155	0/0:20,0:20:1.84:0,2,151	0/1:14,0:13:15.83:16,0,94	1/1:26,0:23:34.98:490,35,0	1/1:18,2:20:10.70:223,11,0	0/1:11,22:35:64.01:67,0,64	0/0:30,0:30:75.16:0,75,1136	0/0:20,0:19:47.99:0,48,636	0/0:26,0:26:19.79:0,20,815	0/0:24,0:24:63.11:0,63,896	0/0:23,0:23:65.62:0,66,825	1/1:26,0:26:6.71:402,7,0	0/0:8,0:6:15:0,15,185
chr10	51943699	.	C	CAA	4792.93	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-7.953;DP=611;FS=6.950;HRun=9;HaplotypeScore=69.1948;InbreedingCoeff=0.9904;MQ=71.60;MQ0=1;MQRankSum=-1.252;QD=33.52;ReadPosRankSum=-0.864;VQSLOD=4.5561;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:45.06:0,45,460	0/0:13,0:13:39.07:0,39,399	0/0:13,0:13:30.07:0,30,318	0/0:11,0:11:17.80:0,18,151	0/0:38,0:38:99:0,102,1051	0/0:22,0:21:51.10:0,51,543	0/0:11,0:11:27.03:0,27,279	1/1:6,26:32:72.21:1062,72,0	0/0:20,0:20:54.11:0,54,566	0/0:30,0:30:72.09:0,72,753	0/0:23,0:23:57.12:0,57,606	0/0:21,0:21:57.11:0,57,599	0/0:15,0:15:39.07:0,39,407	0/0:22,0:22:56.57:0,57,602	0/0:25,0:25:69.16:0,69,727	0/0:22,0:22:60.10:0,60,622	0/0:26,0:26:66.13:0,66,702	0/0:21,0:21:57.11:0,57,596	1/1:6,11:18:36.11:533,36,0	1/1:5,36:43:99:1430,110,0	1/1:0,22:24:54.17:796,54,0	0/0:25,0:25:66.11:0,66,686	0/0:18,0:18:54.12:0,54,567	0/0:12,0:12:33.06:0,33,343	0/0:23,0:23:66.13:0,66,687	0/0:34,0:34:96.23:0,96,1015	1/1:2,22:25:66.16:971,66,0	0/0:7,0:7:12.02:0,12,128
chr10	51945439	.	C	CG	1268.50	PASS	AB=1.000;AC=13;AF=0.250;AN=52;BaseQRankSum=-2.122;DP=361;FS=6.226;HRun=1;HaplotypeScore=57.5524;InbreedingCoeff=0.8067;MQ=42.37;MQ0=23;MQRankSum=-5.690;QD=15.86;ReadPosRankSum=0.444;VQSLOD=3.3745;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:32:66:0,66,730	0/0:3,0:3:6.02:0,6,77	./.	./.	0/0:18,0:18:36.09:0,36,425	0/0:9,0:9:12.03:0,12,139	0/0:13,0:13:32.90:0,33,343	1/1:2,13:14:30.10:443,30,0	0/0:15,0:15:27.03:0,27,281	0/0:13,0:12:27.04:0,27,304	0/0:15,0:15:24.03:0,24,277	0/0:14,0:13:33.03:0,33,364	0/0:13,0:13:30.06:0,30,363	0/0:11,0:11:21.05:0,21,234	0/0:9,0:8:9.02:0,9,101	0/0:13,0:13:30.08:0,30,353	0/1:6,0:5:8.38:8,0,19	1/1:6,0:3:1.44:11,1,0	1/1:4,11:12:29.98:353,30,0	1/1:1,8:10:15.05:220,15,0	1/1:6,2:7:9.02:114,9,0	0/0:8,0:8:15.03:0,15,167	0/0:15,0:15:24.06:0,24,280	0/0:20,0:20:44.48:0,44,506	0/0:14,0:14:30.01:0,30,351	0/0:17,0:16:39.10:0,39,466	1/1:3,17:18:21.07:291,21,0	0/0:11,0:10:18.06:0,18,227
chr10	51945440	.	G	GA	660.70	PASS	AB=1.000;AC=13;AF=0.250;AN=52;BaseQRankSum=6.457;DP=413;FS=1.689;HRun=9;HaplotypeScore=90.6884;InbreedingCoeff=0.7226;MQ=42.40;MQ0=23;MQRankSum=-5.307;QD=7.10;ReadPosRankSum=-2.295;VQSLOD=1.3752;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:37:46.64:0,47,395	0/0:5,0:5:5.95:0,6,52	./.	./.	0/0:23,0:23:32.77:0,33,282	0/0:12,0:12:11.41:0,11,89	0/0:15,0:15:20.98:0,21,182	1/1:17,0:16:13.11:220,13,0	0/0:17,0:17:14.76:0,15,126	0/0:13,0:12:23.95:0,24,204	0/0:16,0:17:19.43:0,19,161	0/0:18,0:17:19.62:0,20,179	0/0:14,0:14:29.66:0,30,254	0/0:15,0:15:11.76:0,12,104	0/0:8,0:7:3.31:0,3,47	0/0:14,0:14:20.76:0,21,182	1/1:8,3:10:9.41:74,9,0	1/1:3,3:3:5.98:53,6,0	1/1:16,0:13:18.40:141,18,0	1/1:11,0:11:14.99:127,15,0	1/1:9,0:8:6:52,6,0	0/0:9,0:10:8.96:0,9,78	0/0:16,0:16:17.89:0,18,153	0/0:20,0:20:35.26:0,35,294	0/0:15,0:15:3.20:0,3,184	0/0:21,0:20:29.77:0,30,257	0/1:23,0:21:11.05:163,0,11	0/0:12,0:11:9.45:0,9,154
chr10	51947756	.	CT	C	319.92	PASS	AB=0.750;AC=9;AF=0.161;AN=56;BaseQRankSum=11.025;DP=670;FS=0.527;HRun=1;HaplotypeScore=114.4378;InbreedingCoeff=0.8840;MQ=79.63;MQ0=0;MQRankSum=-10.645;QD=4.92;ReadPosRankSum=1.894;VQSLOD=0.5386;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,129,2030	0/0:15,0:15:45.15:0,45,717	0/0:20,0:20:57.18:0,57,880	0/0:21,0:21:31.53:0,32,873	0/0:32,0:32:93.30:0,93,1464	0/0:15,0:15:42.14:0,42,672	0/0:24,0:24:72.22:0,72,1105	0/1:4,2:6:7.12:27,0,7	0/0:30,0:30:90.29:0,90,1383	0/0:31,0:31:90.30:0,90,1410	0/0:25,0:25:72.25:0,72,1146	0/0:36,0:36:99:0,108,1725	0/0:26,0:26:78.27:0,78,1244	0/0:30,0:30:90.31:0,90,1439	0/0:32,0:32:96.33:0,96,1535	0/0:35,0:35:99:0,105,1656	0/0:28,0:28:84.29:0,84,1343	0/0:18,0:17:51.17:0,51,815	1/1:4,6:10:16.70:81,17,0	1/1:3,15:18:20.96:100,21,0	1/1:1,6:7:17.35:72,17,0	0/0:31,0:31:93.32:0,93,1477	0/0:25,0:25:75.24:0,75,1156	0/0:26,0:26:78.24:0,78,1200	0/0:16,0:16:48.16:0,48,764	0/0:35,0:35:99:0,105,1679	1/1:2,21:24:53.49:202,53,0	0/0:10,0:10:30.10:0,30,480
chr10	51947758	.	CAAGCAAAGACCCCA	C	4969.31	PASS	AB=0.667;AC=9;AF=0.161;AN=56;BaseQRankSum=12.137;DP=657;FS=1.086;HRun=0;HaplotypeScore=279.3441;InbreedingCoeff=0.8612;MQ=79.00;MQ0=0;MQRankSum=-10.937;QD=85.68;ReadPosRankSum=2.207;VQSLOD=4.1426;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,126,8749	0/0:15,0:15:45.14:0,45,2607	0/0:20,0:20:60.21:0,60,3136	0/0:16,0:17:51.17:0,51,2458	0/0:32,0:32:93.32:0,93,6233	0/0:15,0:15:45.15:0,45,3188	0/0:24,0:24:72.25:0,72,4879	0/1:2,2:4:33.46:182,0,33	0/0:29,0:29:87.30:0,87,5658	0/0:31,0:31:93.32:0,93,6277	0/0:24,0:24:72.23:0,72,4715	0/0:36,0:36:99:0,108,7003	0/0:25,0:25:75.26:0,75,5026	0/0:30,0:30:90.31:0,90,6123	0/0:32,0:32:96.33:0,96,6436	0/0:36,0:36:99:0,108,7376	0/0:29,0:29:87.30:0,87,5866	0/0:17,0:16:51.18:0,51,3366	1/1:2,6:8:23.34:618,23,0	1/1:3,15:18:16.15:1431,16,0	1/1:0,6:6:18.06:583,18,0	0/0:31,0:31:93.32:0,93,6352	0/0:25,0:25:75.26:0,75,4745	0/0:25,0:25:75.26:0,75,5300	0/0:18,0:18:54.17:0,54,3447	0/0:36,0:36:99:0,108,7174	1/1:1,21:22:66.23:2156,66,0	0/0:10,0:10:30.10:0,30,2169
chr10	51947774	.	TTAA	T	1996.78	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=12.013;DP=660;FS=0.515;HRun=0;HaplotypeScore=135.2281;InbreedingCoeff=0.9897;MQ=80.31;MQ0=0;MQRankSum=-10.790;QD=32.73;ReadPosRankSum=1.775;VQSLOD=4.2225;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,129,3125	0/0:11,0:11:33.11:0,33,813	0/0:16,0:16:44.80:0,45,990	0/0:19,0:19:56.86:0,57,1304	0/0:40,0:40:99:0,120,2865	0/0:19,0:19:57.17:0,57,1351	0/0:26,0:26:78.26:0,78,1875	1/1:2,2:4:12.02:140,12,0	0/0:26,0:26:78.27:0,78,1907	0/0:28,0:28:84.29:0,84,2071	0/0:27,0:27:81.28:0,81,1949	0/0:32,0:32:96.33:0,96,2338	0/0:25,0:25:75.26:0,75,1849	0/0:29,0:29:87.30:0,87,2144	0/0:33,0:33:99:0,99,2426	0/0:33,0:33:99:0,99,2334	0/0:28,0:28:84.29:0,84,2071	0/0:16,0:15:48.16:0,48,1183	1/1:1,6:7:21.07:305,21,0	1/1:0,17:17:45.13:569,45,0	1/1:3,6:10:18.06:231,18,0	0/0:29,0:29:87.30:0,87,2145	0/0:24,0:24:72.25:0,72,1729	0/0:30,0:30:90.29:0,90,2168	0/0:19,0:19:57.20:0,57,1404	0/0:36,0:36:99:0,108,2663	1/1:2,21:23:69.22:923,69,0	0/0:10,0:10:30.10:0,30,740
chr10	51948182	.	A	AT	4496.61	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-10.309;DP=674;FS=6.411;HRun=7;HaplotypeScore=61.3740;InbreedingCoeff=0.9752;MQ=84.34;MQ0=0;MQRankSum=-4.332;QD=30.18;ReadPosRankSum=-1.090;VQSLOD=4.9199;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,114,1094	0/0:13,0:13:33.05:0,33,319	0/0:30,0:29:74.82:0,75,699	0/0:19,0:19:22.06:0,22,352	0/0:34,0:34:99:0,99,946	0/0:25,0:25:72.10:0,72,690	0/0:20,0:20:51.06:0,51,486	1/1:6,32:38:96.27:1146,96,0	0/0:20,0:20:57.08:0,57,544	0/0:18,0:18:48.07:0,48,459	0/0:21,0:21:48.07:0,48,463	0/0:25,0:25:69.09:0,69,661	0/0:27,0:27:75.11:0,75,719	0/0:18,0:18:51.08:0,51,492	0/0:30,0:30:81.12:0,81,776	0/0:27,0:26:72.11:0,72,695	0/0:22,0:22:57.09:0,57,550	0/0:16,0:16:48.08:0,48,462	1/1:3,16:19:48.15:577,48,0	1/1:5,29:34:90.25:1070,90,0	1/1:0,29:29:69.21:834,69,0	0/0:26,0:26:72.11:0,72,695	0/0:23,0:23:60.09:0,60,578	0/0:19,0:19:54.09:0,54,522	0/0:25,0:25:66.10:0,66,637	0/0:25,0:25:66.06:0,66,628	1/1:3,26:28:72.22:870,72,0	0/0:3,0:3:6.01:0,6,58
chr10	51948713	.	T	TCAACAACACA	1274.64	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=5.015;DP=658;FS=1.076;HRun=0;HaplotypeScore=197.5986;InbreedingCoeff=0.8701;MQ=85.96;MQ0=0;MQRankSum=-4.808;QD=84.98;ReadPosRankSum=-0.656;VQSLOD=3.6732;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,111,3690	0/0:9,0:9:27.09:0,27,939	0/0:25,0:25:71.61:0,72,1770	0/0:20,0:20:53.76:0,54,1216	0/0:33,0:33:99:0,99,3093	0/0:45,0:45:99:0,126,4218	0/0:16,0:16:48.16:0,48,1591	0/0:48,0:48:99:0,132,4263	0/0:24,0:24:72.22:0,72,2278	0/0:35,0:35:99:0,105,3306	0/0:29,0:29:87.30:0,87,2970	1/1:0,2:2:6.02:276,6,0	1/1:2,2:4:12.03:377,12,0	0/0:32,0:32:93.30:0,93,3118	0/0:31,0:31:90.30:0,90,2759	0/0:24,0:24:72.25:0,72,2504	0/0:34,0:34:99:0,102,3330	0/0:16,0:16:48.15:0,48,1597	0/0:17,0:17:51.18:0,51,1564	0/0:45,0:44:99:0,135,4363	0/0:25,0:25:72.25:0,72,2472	1/1:0,1:1:3.01:137,3,0	1/1:2,3:5:15.05:579,15,0	1/1:2,1:3:3.01:54,3,0	0/0:30,0:30:87.27:0,87,2634	0/0:31,0:31:90.31:0,90,2982	0/0:32,0:32:96.28:0,96,3065	0/0:5,0:5:15.05:0,15,524
chr10	51948715	.	T	TAAGGC	415.58	PASS	AB=0.600;AC=7;AF=0.125;AN=56;BaseQRankSum=5.389;DP=654;FS=1.183;HRun=0;HaplotypeScore=131.1905;InbreedingCoeff=0.7010;MQ=86.09;MQ0=0;MQRankSum=-4.812;QD=37.78;ReadPosRankSum=2.619;VQSLOD=3.6262;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,111,2586	0/0:10,0:10:30.09:0,30,656	0/0:27,0:27:69.23:0,69,1490	0/0:18,0:18:50.71:0,51,990	0/0:31,0:31:93.32:0,93,2163	0/0:45,0:45:99:0,129,2914	0/0:16,0:16:45.14:0,45,1003	0/0:50,0:50:99:0,141,3167	0/0:23,0:23:69.24:0,69,1606	0/0:36,0:36:99:0,102,2318	0/0:29,0:29:87.29:0,87,1973	1/1:0,2:2:6.02:133,6,0	0/1:1,2:3:8.55:122,0,9	0/0:32,0:32:96.32:0,96,2172	0/0:31,0:31:90.27:0,90,1905	0/0:24,0:24:72.25:0,72,1678	0/0:33,0:33:99:0,99,2304	0/0:17,0:17:51.16:0,51,1140	0/0:16,0:16:48.16:0,48,1069	0/0:43,0:43:99:0,129,2975	0/0:25,0:25:75.24:0,75,1680	1/1:0,1:1:3.01:66,3,0	1/1:2,3:5:13.82:222,14,0	0/0:2,1:3:2.96:0,3,19	0/0:29,0:29:87.30:0,87,1976	0/0:31,0:31:93.32:0,93,2093	0/0:32,0:32:96.32:0,96,2185	0/0:5,0:5:15.05:0,15,350
chr10	51948719	.	T	TCC	144.04	PASS	AC=8;AF=0.148;AN=54;BaseQRankSum=5.148;DP=655;FS=0.000;HRun=0;HaplotypeScore=91.2109;InbreedingCoeff=0.8678;MQ=87.61;MQ0=0;MQRankSum=-4.652;QD=10.29;ReadPosRankSum=2.819;VQSLOD=3.4099;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,117,1894	0/0:10,0:10:30.10:0,30,490	0/0:31,0:31:81.22:0,81,1235	0/0:17,0:17:41.97:0,42,623	0/0:32,0:32:96.31:0,96,1543	0/0:45,0:45:99:0,123,1978	0/0:18,0:18:48.16:0,48,779	0/0:47,0:47:99:0,135,2181	0/0:25,0:25:75.25:0,75,1197	0/0:34,0:34:99:0,102,1623	0/0:30,0:30:90.30:0,90,1443	1/1:1,2:3:5.92:65,6,0	1/1:3,2:5:6.01:63,6,0	0/0:33,0:33:99:0,99,1613	0/0:26,0:26:78.27:0,78,1271	0/0:24,0:24:69.24:0,69,1122	0/0:34,0:34:99:0,102,1617	0/0:19,0:19:57.19:0,57,910	0/0:13,0:13:39.13:0,39,633	0/0:40,0:40:99:0,120,1957	0/0:24,0:24:72.25:0,72,1171	1/1:1,1:2:3:30,3,0	1/1:1,3:4:12:118,12,0	./.	0/0:29,0:29:84.29:0,84,1371	0/0:32,0:32:93.31:0,93,1491	0/0:32,0:32:96.28:0,96,1483	0/0:5,0:5:15.05:0,15,245
chr10	51948720	.	T	TAAGAGG	693.72	PASS	AC=8;AF=0.148;AN=54;BaseQRankSum=5.635;DP=658;FS=4.428;HRun=0;HaplotypeScore=143.5822;InbreedingCoeff=0.9123;MQ=86.44;MQ0=0;MQRankSum=-4.160;QD=53.36;ReadPosRankSum=1.239;VQSLOD=3.2866;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,120,2939	0/0:11,0:11:30.10:0,30,769	0/0:30,0:30:81.28:0,81,1930	0/0:16,0:16:41.87:0,42,902	0/0:32,0:32:96.33:0,96,2419	0/0:45,0:45:99:0,132,3183	0/0:18,0:18:54.14:0,54,1200	0/0:47,0:47:99:0,132,3244	0/0:25,0:25:75.23:0,75,1791	0/0:35,0:35:99:0,102,2599	0/0:31,0:31:90.31:0,90,2249	1/1:1,2:3:9.03:248,9,0	1/1:3,2:5:9:200,9,0	0/0:33,0:33:99:0,99,2496	0/0:26,0:26:78.27:0,78,1958	0/0:24,0:24:72.22:0,72,1725	0/0:34,0:34:99:0,102,2542	0/0:19,0:19:57.15:0,57,1339	0/0:14,0:14:39.13:0,39,942	0/0:40,0:40:99:0,120,3055	0/0:24,0:24:72.25:0,72,1818	1/1:1,1:2:6:114,6,0	1/1:0,3:3:9.03:270,9,0	./.	0/0:30,0:30:87.29:0,87,2159	0/0:32,0:32:93.31:0,93,2261	0/0:32,0:32:93.29:0,93,2181	0/0:5,0:5:15.05:0,15,385
chr10	51949676	.	GA	G	2321.43	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=9.637;DP=568;FS=3.061;HRun=9;HaplotypeScore=70.1515;InbreedingCoeff=0.9796;MQ=80.52;MQ0=0;MQRankSum=-2.308;QD=20.73;ReadPosRankSum=1.957;VQSLOD=4.5731;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:31:93.11:0,93,1050	0/0:8,0:8:21.06:0,21,242	0/0:12,0:13:22.80:0,23,268	0/0:22,0:23:8.75:0,9,353	0/0:21,0:21:58.33:0,58,631	0/0:12,0:12:33.10:0,33,381	0/0:23,0:23:60.18:0,60,693	0/0:30,1:30:47.73:0,48,785	0/0:11,0:11:21.06:0,21,241	0/0:18,0:18:42.12:0,42,485	0/0:29,0:29:66.12:0,66,727	1/1:2,17:19:48.02:439,48,0	1/1:3,16:19:45.01:411,45,0	0/0:14,0:14:39.10:0,39,440	0/0:26,0:26:63.17:0,63,711	0/0:25,0:25:66.19:0,66,752	0/0:14,0:15:38.95:0,39,428	0/0:24,0:24:69.15:0,69,772	0/0:20,0:20:48.10:0,48,533	0/0:21,0:21:54.12:0,54,608	0/0:24,1:25:41.72:0,42,723	1/1:2,27:29:72.03:658,72,0	1/1:3,20:23:60.03:549,60,0	1/1:4,18:22:47.98:439,48,0	0/0:19,0:19:57.16:0,57,650	0/0:21,0:21:57.17:0,57,657	0/0:20,0:20:60.14:0,60,663	0/0:6,0:6:15.04:0,15,173
chr10	51949727	.	TAC	T	1021.61	PASS	AB=0.960;AC=31;AF=0.596;AN=52;BaseQRankSum=6.188;DP=582;FS=8.794;HRun=0;HaplotypeScore=87.5483;InbreedingCoeff=0.4137;MQ=63.59;MQ0=8;MQRankSum=0.476;QD=3.10;ReadPosRankSum=2.778;VQSLOD=1.2423;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:22:2.22:7,2,0	1/1:8,3:11:3.01:32,3,0	./.	./.	0/1:28,0:28:24.01:24,0,131	0/0:18,0:18:26.85:0,27,274	0/0:22,0:20:9:0,9,92	0/0:33,0:31:2.90:0,3,16	0/0:14,0:14:20.98:0,21,222	0/0:20,0:19:0.43:0,0,199	0/0:15,0:15:3.01:0,3,44	1/1:14,1:15:3.01:32,3,0	1/1:12,1:13:6.49:65,6,0	0/0:26,3:29:6.48:0,6,275	1/1:17,8:25:9.49:98,9,0	1/1:14,11:25:3.01:32,3,0	1/1:11,2:14:17.81:163,18,0	1/1:16,4:21:0.56:152,1,0	1/1:13,0:12:3.89:33,4,0	0/1:19,3:22:4.24:77,0,4	1/1:30,1:30:17.63:134,18,0	1/1:22,0:22:2.84:14,3,0	1/1:17,1:18:3.01:32,3,0	1/1:20,4:24:22.81:210,23,0	0/0:28,0:28:12:0,12,118	0/0:26,0:25:17.89:0,18,138	1/1:8,7:15:6.01:65,6,0	0/1:8,0:8:17.46:17,0,66
chr10	51949947	.	AACAC	A	655.38	PASS	AB=0.889;AC=7;AF=0.125;AN=56;BaseQRankSum=4.928;DP=562;FS=1.616;HRun=0;HaplotypeScore=134.3756;InbreedingCoeff=0.2903;MQ=53.82;MQ0=9;MQRankSum=0.225;QD=7.80;ReadPosRankSum=0.963;VQSLOD=2.9222;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,18:25:3.01:50,3,0	0/1:4,0:5:25.59:31,0,26	0/0:34,0:8:3.01:0,3,56	0/0:28,0:13:15.58:0,16,191	0/0:30,0:30:56.92:0,57,1080	0/0:23,0:23:51.61:0,52,954	0/0:26,0:26:35.84:0,36,609	0/0:33,0:28:55.38:0,55,761	0/0:12,0:12:30.25:0,30,458	0/0:17,0:17:27.08:0,27,561	0/0:19,0:19:39.12:0,39,812	0/0:22,0:21:5.29:0,5,50	0/0:25,0:22:33.02:0,33,349	0/0:20,0:20:39.11:0,39,778	0/0:24,0:26:9.05:0,9,132	0/1:22,0:21:49.61:50,0,81	1/1:12,0:17:35.89:383,36,0	0/1:12,0:15:9.96:272,0,10	0/0:8,0:7:11.25:0,11,171	0/0:23,0:23:15.05:0,15,225	0/0:10,0:10:3.01:0,3,66	0/0:26,0:27:12.03:0,12,169	0/0:20,0:18:3.01:0,3,48	0/0:12,0:17:3.01:0,3,45	0/0:19,0:19:37.68:0,38,754	0/0:16,0:16:41.88:0,42,847	0/0:12,0:11:14.05:0,14,191	0/0:4,0:4:9.01:0,9,154
chr10	51949971	.	CAG	C	295.53	PASS	AB=0.936;AC=18;AF=0.360;AN=50;BaseQRankSum=4.039;DP=616;FS=0.000;HRun=0;HaplotypeScore=129.9936;InbreedingCoeff=-0.1654;MQ=45.15;MQ0=20;MQRankSum=-3.493;QD=0.80;ReadPosRankSum=1.192;VQSLOD=2.4920;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:26:2.60:0,3,10	0/1:11,0:11:4.99:5,0,51	./.	./.	0/1:36,1:37:2.38:2,0,325	0/1:26,0:26:24.13:24,0,300	0/1:32,1:27:24.48:24,0,223	1/1:23,0:21:17.75:115,18,0	0/0:15,0:14:10.42:0,10,178	0/0:23,0:20:2.71:0,3,468	0/0:26,0:26:21.33:0,21,444	0/1:16,6:22:14.85:15,0,103	0/1:18,7:22:37.23:154,0,37	0/1:19,1:19:5:5,0,352	0/1:30,0:29:3.11:3,0,53	0/0:23,0:21:6.19:0,6,120	0/1:22,0:20:12.68:13,0,14	0/1:13,0:13:10.94:15,0,11	0/1:13,0:10:17.23:17,0,29	./.	0/0:16,0:11:2.92:0,3,17	0/1:22,4:26:0:0,0,0	0/0:21,4:23:8.97:0,9,70	0/0:30,0:26:11.54:0,12,95	0/1:27,1:27:20.62:21,0,402	0/1:24,5:30:2.54:3,0,611	1/1:10,0:9:4.90:18,5,0	0/0:6,0:4:8.97:0,9,71
chr10	51949989	.	GAGAGAGACAGAGAGAGAGAC	G	873.45	PASS	AB=0.971;AC=10;AF=0.200;AN=50;BaseQRankSum=3.450;DP=592;FS=0.629;HRun=0;HaplotypeScore=264.6199;InbreedingCoeff=-0.0079;MQ=44.26;MQ0=27;MQRankSum=-3.743;QD=4.60;ReadPosRankSum=-1.352;VQSLOD=2.2350;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:36,0:31:3.95:4,0,194	0/1:12,0:12:3.02:3,0,74	./.	./.	0/0:37,0:37:56.63:0,57,1969	0/0:30,0:30:43.18:0,43,2155	0/0:29,0:24:19.28:0,19,613	1/1:15,0:12:25.23:232,25,0	0/0:13,0:12:23.89:0,24,845	0/0:26,0:21:63.19:0,63,2459	0/0:27,0:27:54.11:0,54,2322	0/1:24,0:23:34.15:34,0,761	0/1:24,0:21:99:201,0,482	0/0:23,0:22:44.89:0,45,1406	0/1:31,0:30:99:226,0,108	0/1:22,0:20:99:221,0,182	0/0:19,0:17:10.29:0,10,86	0/1:16,0:16:38.37:38,0,417	0/1:7,3:6:14.22:50,0,14	./.	0/0:12,0:6:3:0,3,28	0/0:26,0:25:2.49:0,2,56	0/0:22,0:20:9.50:0,10,521	0/0:27,0:24:20.49:0,20,823	0/0:28,0:27:31.59:0,32,1540	0/0:34,0:34:49.03:0,49,3109	0/0:11,0:10:2.29:0,2,5	0/0:7,0:4:9.03:0,9,419
chr10	51949993	.	GAGAC	G	1148.32	PASS	AB=0.985;AC=18;AF=0.360;AN=50;BaseQRankSum=6.571;DP=587;FS=0.000;HRun=0;HaplotypeScore=160.4545;InbreedingCoeff=0.4523;MQ=44.13;MQ0=27;MQRankSum=-2.421;QD=4.76;ReadPosRankSum=-3.060;VQSLOD=1.5906;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:34,0:29:7.52:63,0,8	1/1:7,5:12:7.95:68,8,0	./.	./.	0/0:35,0:35:49.78:0,50,604	0/0:25,0:25:50.05:0,50,712	0/0:31,0:26:38.99:0,39,519	0/1:14,0:10:17.76:18,0,33	0/0:11,0:10:21.04:0,21,392	0/0:27,0:22:65.35:0,65,1093	0/0:26,0:26:45.08:0,45,830	0/0:25,0:24:23.74:0,24,391	0/1:25,0:22:4.34:4,0,213	0/0:23,0:22:47.58:0,48,550	1/1:29,5:33:35:340,35,0	1/1:19,5:22:34.47:365,34,0	0/1:18,0:16:21.13:62,0,21	1/1:16,0:16:21.60:183,22,0	0/1:9,1:6:40.38:57,0,40	./.	1/1:14,0:8:8:51,8,0	0/0:23,1:23:2.70:0,3,18	0/0:22,0:20:12.02:0,12,233	0/1:30,0:27:4.25:4,0,306	0/0:29,0:28:47.97:0,48,732	0/0:35,0:35:35.97:0,36,1374	1/1:2,8:9:6.02:107,6,0	0/0:7,0:4:11.38:0,11,161
chr10	51949995	.	GAC	G	857.02	PASS	AB=0.991;AC=16;AF=0.320;AN=50;BaseQRankSum=7.962;DP=583;FS=0.502;HRun=0;HaplotypeScore=146.7353;InbreedingCoeff=0.3264;MQ=44.21;MQ0=26;MQRankSum=-0.314;QD=3.86;ReadPosRankSum=-1.903;VQSLOD=2.7343;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:34,0:29:19.84:63,0,20	0/1:11,0:11:7.74:42,0,8	./.	./.	0/0:34,0:34:2.98:0,3,391	0/0:25,0:25:24.97:0,25,481	0/0:34,0:29:35.30:0,35,452	0/0:14,0:10:1.17:0,1,12	0/0:10,0:10:20.91:0,21,276	0/0:28,0:23:53.01:0,53,769	0/0:25,0:25:39.22:0,39,589	0/0:25,0:24:5.59:0,6,260	0/1:25,0:22:67.92:68,0,147	0/0:23,0:22:28.31:0,28,457	1/1:34,0:33:35.06:273,35,0	1/1:24,0:22:6.15:195,6,0	0/1:16,1:15:16.09:73,0,16	1/1:11,3:14:27.21:186,27,0	0/1:10,0:6:22.91:23,0,55	./.	1/1:13,1:8:8.34:53,8,0	0/0:24,0:23:2.94:0,3,18	0/0:22,0:20:11.84:0,12,165	0/1:29,0:26:4.34:4,0,215	0/0:29,0:28:34.43:0,34,528	0/0:35,0:35:15.30:0,15,1033	1/1:10,0:9:5.92:41,6,0	0/0:7,0:4:12.01:0,12,138
chr10	51951713	.	A	AG	8498.02	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-17.912;DP=815;FS=2.948;HRun=3;HaplotypeScore=78.9440;InbreedingCoeff=0.9996;MQ=91.97;MQ0=0;MQRankSum=-2.843;QD=35.71;ReadPosRankSum=-1.377;VQSLOD=4.8733;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,108,1296	1/1:1,14:15:33.11:462,33,0	0/0:37,0:37:74.20:0,74,923	0/0:35,0:34:90.25:0,90,1060	0/0:18,0:18:51.16:0,51,611	0/0:23,0:23:60.18:0,60,720	0/0:36,0:36:96.26:0,96,1125	1/1:2,38:40:99:1560,114,0	0/0:32,0:32:90.26:0,90,1064	0/0:33,0:33:93.28:0,93,1116	0/0:20,0:20:57.17:0,57,680	0/0:31,0:31:90.26:0,90,1064	0/0:45,0:45:99:0,129,1546	0/0:30,0:30:87.25:0,87,1031	1/1:1,34:35:96.32:1345,96,0	1/1:5,33:38:24.32:1188,24,0	0/0:31,0:31:87.26:0,87,1035	0/0:22,0:22:60.18:0,60,717	1/1:0,17:17:51.13:676,51,0	1/1:0,25:25:66.22:917,66,0	1/1:2,45:47:99:1512,108,0	0/0:22,0:22:60.18:0,60,719	0/0:14,0:14:42.13:0,42,504	0/0:48,0:48:99:0,144,1699	0/0:20,0:20:54.16:0,54,648	0/0:30,0:30:84.25:0,84,999	1/1:0,21:21:60.20:839,60,0	0/0:11,0:11:33.10:0,33,396
chr10	51952696	.	T	TTCTCTCTC	3031.38	PASS	AB=0.947;AC=23;AF=0.411;AN=56;BaseQRankSum=9.756;DP=561;FS=2.336;HRun=0;HaplotypeScore=182.0074;InbreedingCoeff=0.2860;MQ=61.85;MQ0=11;MQRankSum=-6.499;QD=10.94;ReadPosRankSum=-4.013;VQSLOD=1.8043;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:12:11.53:233,12,0	1/1:2,3:5:3.88:172,4,0	0/0:52,0:22:13:0,13,250	0/0:36,0:19:10.98:0,11,244	0/0:23,0:26:66.21:0,66,1569	0/0:26,0:26:57.16:0,57,1246	0/0:9,0:9:15.05:0,15,381	0/1:24,0:24:32.54:33,0,131	0/0:14,0:15:24.06:0,24,476	0/0:18,0:19:35.15:0,35,772	0/0:20,0:21:39.09:0,39,862	1/1:18,0:18:5.57:35,6,0	0/1:11,0:13:42.51:78,0,43	0/0:20,0:20:39.13:0,39,968	1/1:14,1:17:21.07:555,21,0	1/1:8,13:21:17.55:472,18,0	1/1:11,0:13:17.59:368,18,0	0/1:8,1:10:14.31:215,0,14	0/1:19,0:18:11.55:136,0,12	1/1:26,0:26:21.07:264,21,0	0/1:9,0:8:13.44:65,0,13	0/1:20,0:20:62.32:95,0,62	0/1:24,0:24:99:111,0,112	0/1:24,0:24:90.60:91,0,123	0/0:31,0:31:54.19:0,54,1300	0/0:12,0:14:33.06:0,33,680	0/1:17,0:18:44.35:302,0,44	0/0:15,0:15:36.12:0,36,899
chr10	51952718	.	C	CTCTG	5468.83	PASS	AB=0.933;AC=28;AF=0.500;AN=56;BaseQRankSum=5.151;DP=544;FS=1.315;HRun=0;HaplotypeScore=141.9972;InbreedingCoeff=0.6380;MQ=52.63;MQ0=16;MQRankSum=-3.565;QD=19.60;ReadPosRankSum=1.059;VQSLOD=4.6987;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:10:1.49:70,1,0	0/1:6,0:6:12.70:28,0,13	0/0:42,0:15:9.22:0,9,180	0/0:27,0:10:14.47:0,14,110	0/0:32,0:32:92.91:0,93,1264	0/0:24,0:24:13.69:0,14,396	0/0:15,0:15:38.96:0,39,360	1/1:20,0:20:41.37:334,41,0	0/0:15,0:15:35.87:0,36,484	0/0:21,0:21:28.10:0,28,692	0/0:18,0:19:43.93:0,44,744	1/1:6,9:15:14.93:248,15,0	1/1:11,2:13:32.66:502,33,0	0/0:21,0:21:56.42:0,56,740	1/1:16,0:15:4.11:105,4,0	0/1:27,0:27:17.09:111,0,17	1/1:15,0:15:2.01:85,2,0	0/1:9,0:7:27.83:28,0,35	1/1:16,0:14:29.85:368,30,0	1/1:0,0:23:21.07:388,21,0	1/1:9,0:11:9.02:114,9,0	0/1:12,7:19:4.10:760,0,4	1/1:18,6:26:44.75:659,45,0	1/1:23,7:30:30.73:953,31,0	0/0:23,0:23:69.02:0,69,977	0/0:12,0:12:36.06:0,36,547	1/1:6,1:17:40.36:718,40,0	0/0:13,0:13:39.06:0,39,605
chr10	51952745	.	A	AGTG	964.16	PASS	AB=0.947;AC=10;AF=0.179;AN=56;BaseQRankSum=6.282;DP=635;FS=1.202;HRun=0;HaplotypeScore=158.0825;InbreedingCoeff=-0.2152;MQ=47.01;MQ0=41;MQRankSum=-6.314;QD=4.70;ReadPosRankSum=-4.626;VQSLOD=0.7517;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:16,0:15:11.45:11,0,13	0/0:6,0:7:5.97:0,6,110	0/0:52,0:7:12.66:0,13,312	0/0:45,0:7:17.88:0,18,275	0/0:32,0:31:87.29:0,87,1584	0/0:22,0:22:63.21:0,63,1141	0/0:18,0:18:51.07:0,51,940	0/1:28,0:26:92.06:92,0,760	0/0:20,0:20:50.92:0,51,902	0/0:20,0:20:53.70:0,54,1002	0/0:21,0:21:63.22:0,63,1149	0/0:14,0:14:17.89:0,18,317	0/0:16,0:16:24.02:0,24,438	0/0:19,0:19:45.15:0,45,803	0/1:11,5:16:99:322,0,179	0/1:19,6:26:99:317,0,439	0/1:17,0:13:38.43:38,0,244	0/1:11,0:10:39.94:40,0,254	0/1:26,0:21:60.73:61,0,460	0/1:18,0:17:73.56:74,0,98	0/1:20,0:17:49.99:50,0,76	0/0:18,0:18:40.69:0,41,653	0/0:31,0:30:47.61:0,48,759	0/0:38,0:38:68.09:0,68,1201	0/0:25,0:25:63.21:0,63,1153	0/0:19,0:17:51.11:0,51,819	0/1:25,0:25:99:103,0,363	0/0:12,0:11:18.26:0,18,543
chr10	51952754	.	T	TGA	3444.40	PASS	AB=0.930;AC=20;AF=0.357;AN=56;BaseQRankSum=3.219;DP=647;FS=8.077;HRun=0;HaplotypeScore=138.9901;InbreedingCoeff=0.3086;MQ=47.54;MQ0=39;MQRankSum=-4.437;QD=11.08;ReadPosRankSum=-0.654;VQSLOD=3.0311;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:17:5.77:0,6,48	1/1:7,0:7:5.81:36,6,0	0/0:47,0:6:2.76:0,3,109	0/0:45,0:9:14.40:0,14,149	0/0:30,0:29:61.35:0,61,783	0/0:23,0:23:68.92:0,69,785	0/0:21,0:21:59.97:0,60,697	0/1:32,0:30:99:316,0,128	0/0:19,0:19:47.74:0,48,584	0/0:16,0:16:45.10:0,45,565	0/0:21,0:21:39.57:0,40,593	0/1:12,3:15:3.88:179,0,4	1/1:4,10:15:26.06:461,26,0	0/0:22,0:22:53.96:0,54,581	0/1:20,0:19:18.54:19,0,33	1/1:26,0:26:10.54:79,11,0	0/1:19,0:14:68.74:79,0,69	1/1:10,0:9:4.30:79,4,0	0/1:32,0:26:61.54:197,0,62	0/0:19,0:18:8.50:0,8,43	0/1:22,0:19:31.21:70,0,31	1/1:7,9:16:38.48:523,38,0	0/1:11,21:31:38.25:471,0,38	1/1:16,24:41:32.96:839,33,0	0/0:23,0:23:59.89:0,60,635	0/0:19,0:17:50.57:0,51,515	0/1:23,0:23:57.61:98,0,58	0/0:13,0:12:36.03:0,36,410
chr10	51953267	.	CTTTA	C	730.68	PASS	AB=0.891;AC=6;AF=0.107;AN=56;BaseQRankSum=3.772;DP=559;FS=4.168;HRun=0;HaplotypeScore=140.3877;InbreedingCoeff=-0.1348;MQ=57.67;MQ0=6;MQRankSum=-0.716;QD=5.18;ReadPosRankSum=-6.385;VQSLOD=0.2786;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:12.63:0,13,689	0/0:6,0:6:12.49:0,12,160	0/1:20,0:11:9.98:10,0,65	0/0:14,0:8:16.66:0,17,86	0/0:20,0:19:48.62:0,49,825	0/0:23,0:23:57.60:0,58,913	0/0:24,0:24:38.02:0,38,602	0/1:22,12:33:99:436,0,235	0/0:16,0:16:37.84:0,38,638	0/0:21,0:20:43.64:0,44,703	0/0:17,0:17:43.20:0,43,616	0/0:21,0:21:49.63:0,50,834	0/0:16,0:16:38.80:0,39,638	0/0:15,0:15:29.21:0,29,435	0/0:28,0:28:71.59:0,72,1228	0/0:22,0:22:53.94:0,54,886	0/1:23,2:26:99:103,0,282	0/1:22,4:25:99:178,0,250	0/1:16,2:16:60.40:60,0,147	0/1:16,1:17:65.17:65,0,312	0/0:29,0:29:38.62:0,39,376	0/0:19,0:19:43.96:0,44,728	0/0:13,0:13:29.41:0,29,395	0/0:27,0:27:24.92:0,25,521	0/0:20,0:20:43.82:0,44,685	0/0:23,0:23:56.48:0,56,939	0/0:16,2:17:3.22:0,3,363	0/0:3,0:3:0.82:0,1,16
chr10	51953268	.	T	TTTCC	4831.80	PASS	AB=0.936;AC=15;AF=0.278;AN=54;BaseQRankSum=-5.728;DP=563;FS=18.074;HRun=0;HaplotypeScore=128.0535;InbreedingCoeff=0.6596;MQ=57.96;MQ0=5;MQRankSum=3.054;QD=24.40;ReadPosRankSum=-3.675;VQSLOD=2.8969;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:36.75:0,37,405	0/1:6,0:6:14.97:15,0,79	0/1:17,0:11:19.68:20,0,52	0/0:13,0:8:2.74:0,3,70	0/0:20,0:19:47.58:0,48,509	0/0:23,0:23:50.48:0,50,530	0/0:25,0:25:53.48:0,53,554	1/1:34,0:33:46.42:551,46,0	0/0:16,0:16:39.08:0,39,419	0/0:21,0:20:43:0,43,414	0/0:16,0:16:35.30:0,35,374	0/0:20,0:21:50.21:0,50,498	0/0:16,0:16:32.49:0,32,351	0/0:15,0:15:29.85:0,30,297	0/0:28,0:28:69.63:0,70,721	0/0:22,0:22:49.54:0,50,568	1/1:8,21:29:22.48:792,22,0	1/1:23,4:26:49.82:828,50,0	0/1:15,3:16:2.45:441,0,2	1/1:5,11:16:35.59:796,36,0	1/1:12,18:31:14.18:569,14,0	0/0:20,0:20:23.11:0,23,443	0/0:13,0:13:22.05:0,22,225	0/0:28,0:28:10.45:0,10,516	0/0:20,0:20:0.39:0,0,422	0/0:23,0:23:2.74:0,3,469	1/1:9,9:17:35.15:820,35,0	./.
chr10	51953321	.	TAC	T	460.13	PASS	AB=0.910;AC=11;AF=0.220;AN=50;BaseQRankSum=1.339;DP=557;FS=1.741;HRun=0;HaplotypeScore=103.2769;InbreedingCoeff=0.1348;MQ=70.14;MQ0=8;MQRankSum=0.236;QD=2.29;ReadPosRankSum=2.690;VQSLOD=2.1141;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:26:20.96:0,21,212	./.	./.	0/0:25,0:15:0:0,0,0	0/1:18,2:20:23.90:24,0,184	0/1:13,3:15:22.91:23,0,76	0/1:30,1:31:8.61:9,0,265	0/0:15,0:14:8.97:0,9,82	0/0:9,0:9:6.02:0,6,87	0/1:20,0:20:7.33:7,0,189	0/0:14,0:14:12.04:0,12,176	0/0:20,0:20:14.99:0,15,145	0/0:15,0:15:15.02:0,15,162	0/0:18,0:18:15.04:0,15,198	0/1:28,1:29:47.54:48,0,179	0/0:25,0:25:18.95:0,19,397	1/1:24,6:31:28.64:277,29,0	1/1:12,4:16:14.50:151,14,0	0/0:16,0:16:11.51:0,12,111	0/0:21,0:21:29.95:0,30,282	0/0:32,0:28:22.86:0,23,245	0/0:13,0:17:3.60:0,4,126	0/0:6,0:6:3.01:0,3,43	0/0:27,0:34:30.01:0,30,328	0/1:11,3:14:52.79:53,0,74	0/1:19,2:21:14.37:14,0,184	0/0:14,0:15:26.83:0,27,242	./.
chr10	51953691	.	TG	T	2317.52	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=12.404;DP=778;FS=0.998;HRun=2;HaplotypeScore=79.9418;InbreedingCoeff=0.9615;MQ=86.79;MQ0=0;MQRankSum=-2.264;QD=33.11;ReadPosRankSum=2.011;VQSLOD=3.8545;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:64,0:64:99:0,180,2693	1/1:0,2:2:6.02:78,6,0	0/0:30,0:30:87.21:0,87,1214	0/0:26,0:26:69.11:0,69,932	0/0:26,0:26:78.26:0,78,1165	0/0:24,0:24:69.23:0,69,1014	0/0:29,0:29:84.24:0,84,1196	0/0:38,0:38:99:0,108,1617	0/0:31,0:31:90.30:0,90,1345	0/0:21,0:21:63.20:0,63,899	0/0:18,0:18:45.13:0,45,632	0/0:18,0:18:54.15:0,54,752	0/0:35,0:35:99:0,105,1531	0/0:44,0:44:99:0,132,1911	1/1:1,34:35:93.30:1207,93,0	1/1:0,33:33:90.29:1168,90,0	0/0:51,0:51:99:0,150,2202	0/0:14,0:14:42.14:0,42,629	0/0:22,0:22:60.18:0,60,875	0/0:22,0:22:63.21:0,63,941	0/0:30,0:30:87.29:0,87,1302	0/0:17,0:17:51.17:0,51,764	0/0:15,0:15:42.07:0,42,602	0/0:45,0:45:99:0,129,1893	0/0:18,0:18:54.18:0,54,807	0/0:29,0:29:81.23:0,81,1154	0/0:27,0:27:75.23:0,75,1083	0/0:14,0:14:42.14:0,42,628
chr10	51958054	.	A	AATCATC	3945.49	PASS	AB=1.000;AC=13;AF=0.260;AN=50;BaseQRankSum=-2.932;DP=671;FS=1.987;HRun=0;HaplotypeScore=147.3711;InbreedingCoeff=0.4337;MQ=65.39;MQ0=3;MQRankSum=-10.327;QD=18.02;ReadPosRankSum=-4.489;VQSLOD=2.2843;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:20:9.03:264,9,0	1/1:5,6:11:12.04:375,12,0	./.	./.	0/0:21,0:21:33.11:0,33,635	0/0:26,0:26:54.17:0,54,987	0/0:29,0:29:30.09:0,30,516	0/0:37,0:37:0:0,0,1	0/0:18,0:19:21.03:0,21,298	0/0:21,0:21:45.11:0,45,840	0/0:10,0:9:18.06:0,18,361	0/1:25,0:25:38.79:244,0,39	0/1:31,0:31:19.63:595,0,20	0/0:35,0:35:63.19:0,63,1125	1/1:15,20:38:42.08:1215,42,0	1/1:11,16:29:24.08:742,24,0	0/0:35,0:35:20.47:0,20,129	0/0:18,0:18:8.51:0,9,63	0/0:11,0:15:12.02:0,12,138	0/0:12,0:23:23.96:0,24,259	./.	0/1:24,0:24:99:223,0,125	0/1:16,0:15:13.97:122,0,14	0/1:25,0:25:33.98:166,0,34	0/0:26,0:26:36.10:0,36,616	0/0:20,0:21:36.11:0,36,647	0/0:10,0:28:39.06:0,39,523	0/0:9,0:9:15.05:0,15,301
chr10	51958095	.	T	TCAC	1836.02	PASS	AB=0.994;AC=14;AF=0.250;AN=56;BaseQRankSum=10.941;DP=695;FS=1.548;HRun=0;HaplotypeScore=117.0405;InbreedingCoeff=0.2135;MQ=56.93;MQ0=13;MQRankSum=-8.276;QD=6.80;ReadPosRankSum=5.676;VQSLOD=2.6389;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:22:9.40:81,9,0	0/1:13,0:13:60.31:60,0,133	0/0:19,0:14:22.76:0,23,222	0/0:21,0:12:26.61:0,27,242	0/0:22,0:22:59.92:0,60,763	0/0:25,0:25:75.14:0,75,1047	0/0:23,0:23:60.04:0,60,727	0/0:36,0:32:16.58:0,17,549	0/0:19,0:18:53.80:0,54,580	0/0:32,0:30:87.02:0,87,1108	0/0:19,0:19:56.83:0,57,613	0/1:19,1:20:30.21:148,0,30	0/1:31,0:31:17.18:215,0,17	0/0:41,0:41:99:0,111,1425	0/1:40,0:40:99:198,0,288	0/1:29,0:29:99:108,0,222	1/1:4,37:41:15.51:772,16,0	1/1:3,14:17:11.98:245,12,0	0/0:16,0:15:38.11:0,38,296	0/0:24,0:23:30.95:0,31,382	0/0:26,0:25:23.93:0,24,200	0/1:18,0:18:81.22:81,0,155	0/1:14,0:13:36.04:45,0,36	0/1:25,0:25:37.93:51,0,38	0/0:24,0:24:71.90:0,72,881	0/0:31,0:30:84.06:0,84,1006	0/0:38,0:37:81.43:0,81,708	0/0:9,0:9:27:0,27,347
chr10	51958098	.	T	TCACCAC	4499.13	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=4.417;DP=716;FS=0.469;HRun=0;HaplotypeScore=145.5498;InbreedingCoeff=0.7144;MQ=57.58;MQ0=13;MQRankSum=-8.329;QD=16.24;ReadPosRankSum=2.516;VQSLOD=4.0954;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,1:21:8.73:266,9,0	0/1:12,0:12:99:200,0,296	0/0:18,0:14:21.99:0,22,454	0/0:21,0:14:29.16:0,29,510	0/0:22,0:22:54.63:0,55,924	0/0:26,0:26:69.24:0,69,1295	0/0:25,0:25:54.15:0,54,913	0/0:36,0:32:68.93:0,69,1050	0/0:20,0:19:51.17:0,51,892	0/0:35,0:33:77.52:0,78,1345	0/0:19,0:19:57.19:0,57,1002	1/1:3,18:24:15.05:451,15,0	1/1:2,29:33:29.34:903,29,0	0/0:42,0:42:99:0,102,1871	0/1:41,0:41:99:590,0,662	0/1:30,0:30:99:395,0,520	1/1:38,0:38:14.52:579,15,0	1/1:17,0:17:18.45:231,18,0	0/0:16,0:15:32.79:0,33,479	0/0:25,0:24:54.14:0,54,810	0/0:27,0:26:21.12:0,21,383	1/1:4,12:18:11.89:395,12,0	1/1:2,13:16:6.02:202,6,0	1/1:6,19:26:11.73:288,12,0	0/0:25,0:25:66.20:0,66,1126	0/0:31,0:30:75.19:0,75,1391	0/0:40,0:39:81.20:0,81,1323	0/0:11,0:11:33.07:0,33,542
chr10	51959126	.	ATC	A	348.02	PASS	AB=0.990;AC=18;AF=0.409;AN=44;BaseQRankSum=3.365;DP=439;FS=1.141;HRun=0;HaplotypeScore=74.9642;InbreedingCoeff=0.2929;MQ=79.22;MQ0=24;MQRankSum=-1.391;QD=2.22;ReadPosRankSum=0.146;VQSLOD=1.5304;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:9,0:9:10:10,0,14	./.	0/0:35,0:20:0:0,0,1	0/0:62,0:28:0:0,0,0	0/0:14,0:14:8.99:0,9,94	0/0:20,0:20:18.03:0,18,214	0/1:19,0:19:22.65:23,0,136	./.	0/0:16,0:17:6.48:0,6,70	0/0:14,0:13:3.45:0,3,31	0/0:10,0:10:8.93:0,9,83	1/1:14,3:17:2.54:32,3,0	1/1:9,0:11:5.98:49,6,0	0/0:8,0:9:0:0,0,0	1/1:18,0:18:9.02:96,9,0	1/1:11,0:11:2.87:32,3,0	1/1:10,1:10:3:33,3,0	1/1:5,1:6:8.88:76,9,0	./.	./.	0/0:21,0:18:2.96:0,3,19	./.	./.	1/1:8,4:12:9.02:96,9,0	0/1:22,1:21:21.19:21,0,38	0/1:20,0:20:17.57:18,0,111	0/0:9,0:9:5.99:0,6,51	0/0:10,0:9:14.95:0,15,162
chr10	51959135	.	TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCCTCTCCCTCTCC	T	1983.92	PASS	AB=1.000;AC=12;AF=0.214;AN=56;BaseQRankSum=-0.320;DP=451;FS=0.600;HRun=0;HaplotypeScore=399.9968;InbreedingCoeff=0.6881;MQ=67.74;MQ0=34;MQRankSum=-0.685;QD=19.45;ReadPosRankSum=0.140;VQSLOD=1.0581;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:15,0:15:53.29:53,0,664	0/0:4,0:4:8.91:0,9,92	0/0:30,0:15:33.21:0,33,483	0/0:58,0:24:45.03:0,45,653	0/0:13,0:13:27.09:0,27,1011	0/1:23,0:23:99:118,0,2309	0/0:24,0:23:53.84:0,54,1924	1/1:24,0:21:51.08:786,51,0	0/0:20,0:19:50.59:0,51,2769	0/0:16,0:14:38.16:0,38,1477	0/0:16,0:15:23.68:0,24,776	0/0:17,0:17:32.66:0,33,1404	0/0:12,0:12:30.07:0,30,813	0/0:10,0:10:15.94:0,16,1250	0/0:17,0:16:13.84:0,14,441	0/0:10,0:10:21.22:0,21,475	0/0:13,0:11:25.31:0,25,847	0/0:8,0:8:3.94:0,4,1008	1/1:4,0:4:6.01:80,6,0	1/1:1,9:10:14.92:139,15,0	1/1:20,0:17:33.10:732,33,0	0/0:8,0:7:6.02:0,6,554	0/0:10,0:10:11.64:0,12,275	0/0:12,0:12:21.06:0,21,1003	0/0:22,0:20:46.29:0,46,1343	0/0:20,0:19:51.17:0,51,2264	1/1:6,0:6:14.46:250,14,0	0/0:9,0:8:24.08:0,24,1188
chr10	51959929	.	TTGAA	T	1866.20	PASS	AB=0.955;AC=9;AF=0.161;AN=56;BaseQRankSum=8.579;DP=756;FS=5.349;HRun=0;HaplotypeScore=136.6375;InbreedingCoeff=0.6141;MQ=75.26;MQ0=2;MQRankSum=2.968;QD=11.89;ReadPosRankSum=2.381;VQSLOD=2.6257;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:15,28:43:72.25:1146,72,0	0/0:8,0:19:27.09:0,27,477	0/0:27,0:23:24.08:0,24,405	0/0:27,0:24:12.01:0,12,216	0/0:27,0:27:45.15:0,45,1038	0/0:24,0:24:42.14:0,42,1005	0/0:21,0:22:32.49:0,32,804	0/0:21,0:21:12.04:0,12,268	0/0:33,0:33:72.23:0,72,1612	0/0:29,1:30:21.46:0,21,1391	0/0:26,0:26:12.44:0,12,1256	0/1:24,1:25:2.62:3,0,915	0/0:32,0:32:66.23:0,66,1567	0/1:28,2:30:35.33:35,0,1199	0/0:20,0:37:45.07:0,45,691	0/0:19,0:35:48.08:0,48,784	1/1:7,15:22:33.11:525,33,0	1/1:1,8:9:18.06:287,18,0	0/1:27,1:27:23.71:24,0,430	0/0:25,0:25:48.16:0,48,1148	0/0:34,0:34:69.24:0,69,1606	0/0:17,0:17:39.13:0,39,933	0/0:23,0:23:48.13:0,48,1040	0/0:35,1:36:18.45:0,18,1367	0/0:33,0:33:66.23:0,66,1541	0/0:35,0:35:75.24:0,75,1657	0/0:26,0:26:51.16:0,51,1137	0/0:9,0:9:18.06:0,18,429
chr10	51960719	.	GA	G	7549.50	PASS	AB=0.929;AC=33;AF=0.589;AN=56;BaseQRankSum=9.849;DP=667;FS=0.327;HRun=11;HaplotypeScore=70.3588;InbreedingCoeff=0.9230;MQ=73.31;MQ0=0;MQRankSum=0.177;QD=17.16;ReadPosRankSum=1.168;VQSLOD=5.7280;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,30:37:73.20:719,73,0	1/1:2,7:9:20.97:172,21,0	0/1:11,1:13:34.75:35,0,89	0/0:11,0:12:21.70:0,22,140	0/0:21,0:21:51.10:0,51,528	0/0:23,1:24:44.51:0,45,663	0/0:18,0:18:48.12:0,48,512	1/1:8,35:44:91.61:732,92,0	0/0:21,0:23:53.97:0,54,557	0/0:33,0:34:81.03:0,81,840	0/0:11,0:11:18.03:0,18,185	1/1:5,27:33:76.93:622,77,0	1/1:6,18:24:50.79:419,51,0	0/0:19,0:19:29.84:0,30,477	1/1:4,29:35:75.97:603,76,0	1/1:1,25:26:65.92:542,66,0	1/1:0,17:17:50.94:419,51,0	1/1:2,15:17:38.95:320,39,0	1/1:12,19:33:55.38:431,55,0	1/1:6,17:23:21.92:386,22,0	1/1:3,14:18:32:252,32,0	1/1:5,20:25:56.91:467,57,0	1/1:2,22:24:59.91:493,60,0	1/1:7,18:26:49.96:400,50,0	0/0:19,1:20:32.42:0,32,516	0/0:31,1:32:74.82:0,75,762	1/1:8,27:36:23.10:540,23,0	0/0:9,0:13:32.58:0,33,299
chr10	51963197	.	G	GAGACAGAC	11913.32	PASS	AB=1.000;AC=32;AF=0.571;AN=56;BaseQRankSum=7.717;DP=883;FS=0.000;HRun=0;HaplotypeScore=272.1289;InbreedingCoeff=0.9153;MQ=64.77;MQ0=8;MQRankSum=-8.728;QD=21.31;ReadPosRankSum=0.058;VQSLOD=3.4519;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:36,6:44:49.75:1017,50,0	1/1:4,0:17:38.90:333,39,0	0/0:39,0:21:18.04:0,18,304	0/1:40,0:31:0.90:1,0,545	0/0:35,0:35:69:0,69,1410	0/0:26,0:26:60.08:0,60,1165	0/0:29,0:29:51.13:0,51,1133	1/1:44,0:40:62.88:989,63,0	0/0:30,0:30:75.18:0,75,1653	0/0:43,0:43:72.18:0,72,1474	0/0:21,0:22:45.09:0,45,891	1/1:11,24:41:48.16:1942,48,0	1/1:21,8:30:54.11:1573,54,0	0/0:26,0:26:45.11:0,45,993	1/1:18,0:36:71.98:703,72,0	1/1:11,0:29:62.90:512,63,0	1/1:20,5:25:24.04:721,24,0	1/1:18,3:21:35.99:930,36,0	1/1:22,0:21:35.81:483,36,0	1/1:41,0:41:26.94:362,27,0	0/1:17,0:16:0:0,0,0	1/1:13,22:44:14.13:612,14,0	1/1:12,16:35:5.92:195,6,0	1/1:29,7:34:20.65:476,21,0	0/0:22,0:22:60.17:0,60,1342	0/0:41,0:41:78.19:0,78,1587	1/1:33,0:33:62.67:1063,63,0	0/0:11,0:11:33.05:0,33,672
chr10	51963284	.	G	GA	744.84	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-1.193;DP=608;FS=0.731;HRun=7;HaplotypeScore=112.7223;InbreedingCoeff=0.9682;MQ=74.75;MQ0=1;MQRankSum=-4.442;QD=23.28;ReadPosRankSum=1.429;VQSLOD=2.8798;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:68.71:0,69,593	0/0:9,0:9:21.03:0,21,202	0/0:33,0:27:46.46:0,46,501	0/0:24,0:22:31.64:0,32,330	0/0:23,0:23:60.08:0,60,575	0/0:17,0:17:48.04:0,48,451	0/0:14,0:14:36.04:0,36,342	0/0:34,0:33:81.10:0,81,774	0/0:25,0:25:63.07:0,63,603	0/0:22,0:22:54.07:0,54,517	0/0:13,0:13:39.05:0,39,373	0/0:30,0:30:69.10:0,69,666	0/0:27,0:27:63.07:0,63,603	0/0:24,0:24:66.06:0,66,627	0/0:24,0:24:57.09:0,57,550	0/0:22,0:22:54.07:0,54,516	1/1:2,14:16:38.98:434,39,0	1/1:3,13:16:38.95:432,39,0	0/0:15,0:15:45.07:0,45,430	0/0:21,0:21:56.72:0,57,485	0/0:6,0:6:9.01:0,9,87	0/0:24,0:24:62.69:0,63,535	0/0:22,0:22:47.77:0,48,463	0/0:25,0:25:53.88:0,54,505	0/0:24,0:24:70:0,70,668	0/0:27,0:27:75.12:0,75,724	0/0:28,0:28:62.95:0,63,580	0/0:15,0:15:33.04:0,33,319
chr10	51963295	.	T	TGATA	7956.08	PASS	AB=0.867;AC=38;AF=0.731;AN=52;BaseQRankSum=-3.811;DP=643;FS=13.096;HRun=0;HaplotypeScore=135.0123;InbreedingCoeff=0.5288;MQ=65.02;MQ0=11;MQRankSum=-0.638;QD=16.30;ReadPosRankSum=-1.266;VQSLOD=3.6972;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:16,14:33:22.20:557,22,0	1/1:4,7:11:12.04:280,12,0	./.	./.	0/1:24,1:25:21.91:22,0,636	1/1:9,8:17:18.06:420,18,0	0/0:16,0:16:4.55:0,5,190	1/1:38,0:35:6.02:105,6,0	0/0:25,0:25:36.12:0,36,552	0/1:12,11:23:6.90:796,0,7	1/1:7,8:15:18.06:420,18,0	1/1:23,9:32:42.14:899,42,0	1/1:15,11:26:30.10:699,30,0	0/0:23,0:23:45.15:0,45,688	1/1:14,14:28:30.10:701,30,0	1/1:10,10:21:18.06:420,18,0	1/1:14,1:15:9.01:133,9,0	0/1:11,0:13:11.92:46,0,12	1/1:19,0:18:9.03:137,9,0	1/1:24,1:30:15.52:262,16,0	1/1:10,0:9:6.02:94,6,0	1/1:12,1:25:30.10:537,30,0	1/1:12,10:21:27.09:628,27,0	1/1:17,7:24:9.03:210,9,0	0/0:26,0:26:45.15:0,45,689	0/1:24,1:25:33.99:34,0,451	1/1:20,0:34:33.11:556,33,0	0/0:17,0:17:24.08:0,24,348
chr10	51964923	.	AAAATATCACAGCAG	A	7699.32	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=10.218;DP=640;FS=10.234;HRun=0;HaplotypeScore=281.6229;InbreedingCoeff=0.9978;MQ=87.34;MQ0=0;MQRankSum=-9.912;QD=81.05;ReadPosRankSum=0.075;VQSLOD=2.8996;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:93.31:0,93,5759	0/0:12,0:12:33.11:0,33,1999	0/0:28,0:28:81.19:0,81,3861	0/0:22,0:22:60.21:0,60,3287	0/0:16,0:16:48.16:0,48,3116	0/0:23,0:23:69.24:0,69,4401	0/0:32,0:32:96.33:0,96,5573	1/1:9,17:26:51.16:1704,51,0	0/0:25,0:25:75.26:0,75,4733	0/0:27,0:27:78.26:0,78,5012	0/0:11,0:11:33.11:0,33,2034	0/0:31,0:31:93.32:0,93,5271	0/0:28,0:28:84.27:0,84,4837	0/0:19,0:19:57.20:0,57,3979	0/0:27,0:27:81.28:0,81,4752	0/0:29,0:29:87.30:0,87,5190	0/0:32,0:32:96.29:0,96,6150	0/0:32,0:32:90.31:0,90,5968	1/1:2,11:13:33.04:1107,33,0	1/1:4,12:16:39.09:1439,39,0	1/1:8,10:18:20.65:908,21,0	0/0:22,0:22:63.68:0,64,3467	0/0:19,0:19:57.18:0,57,3372	0/0:37,0:37:99:0,111,6715	0/0:18,0:18:54.19:0,54,3439	0/0:17,0:17:48.15:0,48,3040	1/1:2,20:22:60.21:2542,60,0	0/0:7,0:7:21.07:0,21,1497
chr10	51965967	.	G	GAACA	6966.08	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=13.818;DP=737;FS=21.711;HRun=0;HaplotypeScore=159.0805;InbreedingCoeff=0.9979;MQ=93.03;MQ0=0;MQRankSum=-14.748;QD=62.20;ReadPosRankSum=-2.872;VQSLOD=3.8032;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,108,2126	0/0:11,0:11:33.10:0,33,624	0/0:38,0:38:97.56:0,98,2015	0/0:32,0:31:78.27:0,78,1513	0/0:24,0:24:72.25:0,72,1425	0/0:34,0:34:96.31:0,96,1858	0/0:21,0:21:63.22:0,63,1235	1/1:17,10:27:81.27:1821,81,0	0/0:27,0:27:81.28:0,81,1600	0/0:35,0:35:99:0,102,1966	0/0:19,0:19:57.20:0,57,1138	0/0:31,0:31:87.28:0,87,1703	0/0:29,0:29:81.26:0,81,1535	0/0:31,0:31:90.31:0,90,1777	0/0:38,0:38:99:0,111,2206	0/0:33,0:33:96.30:0,96,1848	0/0:22,0:22:66.23:0,66,1317	0/0:23,0:23:66.18:0,66,1278	1/1:7,7:14:42.13:980,42,0	1/1:6,24:30:56.51:1740,57,0	1/1:8,6:14:30.10:619,30,0	0/0:23,0:23:63.20:0,63,1200	0/0:21,0:21:63.20:0,63,1223	0/0:28,0:28:84.22:0,84,1600	0/0:28,0:28:84.29:0,84,1678	0/0:31,0:31:90.27:0,90,1759	1/1:8,18:27:66.50:1807,67,0	0/0:6,0:6:18.06:0,18,360
chr10	51965969	.	T	TGGA	4626.97	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=15.489;DP=728;FS=1.876;HRun=0;HaplotypeScore=148.9262;InbreedingCoeff=0.9970;MQ=92.58;MQ0=0;MQRankSum=-14.737;QD=45.36;ReadPosRankSum=-1.867;VQSLOD=5.5929;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,108,1848	0/0:10,0:10:30.10:0,30,529	0/0:38,0:38:99:0,99,1787	0/0:30,0:29:81.28:0,81,1383	0/0:25,0:25:69.24:0,69,1217	0/0:33,0:33:96.29:0,96,1619	0/0:23,0:23:60.19:0,60,1025	1/1:12,10:22:22.67:926,23,0	0/0:28,0:28:84.27:0,84,1442	0/0:35,0:35:99:0,102,1724	0/0:22,0:22:57.19:0,57,997	0/0:30,0:30:90.29:0,90,1552	0/0:26,0:26:72.23:0,72,1233	0/0:32,0:32:96.30:0,96,1624	0/0:39,0:39:99:0,114,1955	0/0:32,0:32:96.33:0,96,1678	0/0:24,0:24:66.22:0,66,1149	0/0:24,0:24:66.20:0,66,1125	1/1:3,7:10:30.10:537,30,0	1/1:6,24:30:81.27:1363,81,0	1/1:5,6:11:27.09:458,27,0	0/0:24,0:24:66.23:0,66,1140	0/0:23,0:23:69.20:0,69,1151	0/0:27,0:27:78.27:0,78,1376	0/0:28,0:28:84.29:0,84,1467	0/0:30,0:30:87.30:0,87,1531	1/1:9,18:29:66.13:1343,66,0	0/0:6,0:6:18.06:0,18,318
chr10	51965975	.	TA	T	3602.36	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=15.433;DP=736;FS=2.301;HRun=1;HaplotypeScore=113.1237;InbreedingCoeff=0.9978;MQ=93.74;MQ0=0;MQRankSum=-13.409;QD=32.75;ReadPosRankSum=-1.328;VQSLOD=3.0995;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,114,1772	0/0:11,0:11:33.10:0,33,505	0/0:39,0:39:99:0,113,1702	0/0:32,0:31:86.92:0,87,1273	0/0:25,0:25:75.22:0,75,1149	0/0:33,0:33:99:0,99,1556	0/0:21,0:21:63.20:0,63,984	1/1:0,23:23:69.18:862,69,0	0/0:28,0:28:84.27:0,84,1319	0/0:33,0:33:96.33:0,96,1535	0/0:21,0:21:63.20:0,63,983	0/0:30,0:30:90.29:0,90,1416	0/0:24,0:24:72.23:0,72,1126	0/0:31,0:31:93.30:0,93,1463	0/0:38,0:38:99:0,114,1799	0/0:34,0:34:99:0,102,1602	0/0:23,0:23:69.24:0,69,1102	0/0:23,0:23:66.22:0,66,1048	1/1:0,10:10:30.10:394,30,0	1/1:0,35:35:92.86:1053,93,0	1/1:0,12:12:29.87:290,30,0	0/0:25,0:25:72.24:0,72,1133	0/0:28,0:28:84.25:0,84,1274	0/0:27,0:27:81.26:0,81,1271	0/0:28,0:28:81.28:0,81,1292	0/0:28,0:28:84.29:0,84,1343	1/1:1,29:30:87.05:1003,87,0	0/0:6,0:6:18.06:0,18,288
chr10	51966433	.	A	AT	4070.13	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=0.610;DP=614;FS=7.901;HRun=6;HaplotypeScore=59.0344;InbreedingCoeff=0.9933;MQ=67.74;MQ0=0;MQRankSum=-1.573;QD=33.92;ReadPosRankSum=-1.499;VQSLOD=2.9536;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:69.15:0,69,704	0/0:18,0:18:54.09:0,54,542	0/0:8,0:8:24.01:0,24,234	0/0:13,0:14:36.08:0,36,363	0/0:39,0:39:99:0,108,1102	0/0:27,0:27:78.18:0,78,796	0/0:11,0:11:27.06:0,27,275	1/1:6,29:35:87.25:1067,87,0	0/0:11,0:11:27.05:0,27,275	0/0:31,0:31:84.19:0,84,857	0/0:32,0:32:87.20:0,87,887	0/0:28,0:28:81.18:0,81,826	0/0:28,0:28:84.19:0,84,856	0/0:22,0:22:57.13:0,57,581	0/0:19,0:19:54.12:0,54,551	0/0:29,0:29:69.11:0,69,687	0/0:20,0:20:57.11:0,57,573	0/0:20,0:20:51.10:0,51,517	1/1:1,10:11:30.10:377,30,0	1/1:3,41:44:99:1509,120,0	1/1:0,5:5:15.05:189,15,0	0/0:17,0:17:48.11:0,48,490	0/0:20,0:20:51.10:0,51,514	0/0:9,0:9:21.05:0,21,214	0/0:31,0:31:90.20:0,90,918	0/0:26,0:26:78.14:0,78,776	1/1:1,24:25:75.21:928,75,0	0/0:8,0:8:21.05:0,21,214
chr10	51966721	.	CACA	C	5700.73	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=15.895;DP=729;FS=2.059;HRun=0;HaplotypeScore=115.6814;InbreedingCoeff=0.9981;MQ=83.11;MQ0=0;MQRankSum=-7.044;QD=35.41;ReadPosRankSum=-1.898;VQSLOD=5.2360;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:57:99:0,172,3752	0/0:12,0:12:36.12:0,36,802	0/0:24,0:24:44.98:0,45,1230	0/0:18,0:18:41.29:0,41,805	0/0:32,0:32:90.29:0,90,1889	0/0:21,0:21:63.22:0,63,1403	0/0:29,0:29:84.29:0,84,1873	1/1:4,34:38:99:1540,102,0	0/0:19,0:19:57.18:0,57,1210	0/0:38,0:38:99:0,114,2414	0/0:20,0:20:57.18:0,57,1211	0/0:22,0:22:63.22:0,63,1383	0/0:41,0:41:99:0,120,2674	0/0:30,0:30:81.26:0,81,1717	0/0:37,0:37:99:0,111,2302	0/0:25,0:25:69.24:0,69,1540	0/0:23,0:23:69.22:0,69,1498	0/0:13,0:13:39.13:0,39,871	1/1:2,16:18:45.06:650,45,0	1/1:2,36:38:78:1138,78,0	1/1:1,40:41:90.17:1395,90,0	0/0:23,0:23:69.24:0,69,1518	0/0:15,0:15:42.12:0,42,876	0/0:22,0:22:63.17:0,63,1317	0/0:16,0:16:42.14:0,42,938	0/0:25,0:25:75.23:0,75,1591	1/1:1,25:26:60.11:978,60,0	0/0:6,0:6:18.06:0,18,402
chr10	51968378	.	GC	G	2402.51	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=8.826;DP=641;FS=0.876;HRun=8;HaplotypeScore=67.9029;InbreedingCoeff=0.9870;MQ=65.50;MQ0=0;MQRankSum=-1.243;QD=23.10;ReadPosRankSum=1.883;VQSLOD=4.4351;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,149,1754	0/0:1,0:6:14.38:0,14,73	0/0:18,0:18:35.90:0,36,360	0/0:9,0:9:12.03:0,12,132	0/0:26,0:26:75.23:0,75,905	0/0:9,0:8:24.05:0,24,267	0/0:34,0:34:81.23:0,81,966	0/0:31,0:32:66.01:0,66,740	0/0:22,0:22:63.17:0,63,747	0/0:23,0:24:66.06:0,66,766	0/0:11,0:11:30.09:0,30,362	1/1:1,16:17:36.06:348,36,0	1/1:2,19:21:51.08:492,51,0	0/0:28,0:28:63.16:0,63,719	0/0:1,0:21:54.55:0,55,276	0/0:3,0:21:54.71:0,55,288	0/0:36,0:36:99:0,102,1193	0/0:27,0:27:75.23:0,75,906	0/0:28,0:28:69.21:0,69,833	0/0:16,0:16:36.10:0,36,424	0/0:42,0:42:99:0,114,1373	1/1:1,20:21:60.10:579,60,0	1/1:1,20:21:54.08:521,54,0	1/1:2,22:24:66.11:637,66,0	0/0:22,0:22:60.18:0,60,725	0/0:28,0:28:78.24:0,78,942	0/0:17,0:17:45.09:0,45,516	0/0:7,0:7:21.06:0,21,254
chr10	51968716	.	GCT	G	160.13	PASS	AC=6;AF=0.125;AN=48;BaseQRankSum=-0.701;DP=707;FS=28.057;HRun=0;HaplotypeScore=91.1352;InbreedingCoeff=0.5561;MQ=62.33;MQ0=15;MQRankSum=2.772;QD=2.35;ReadPosRankSum=2.487;VQSLOD=0.2547;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:34:2.74:12,3,0	0/0:6,0:6:6.01:0,6,66	./.	./.	./.	0/0:18,0:18:9.03:0,9,125	0/0:27,0:36:21.46:0,21,194	0/0:45,0:45:24.07:0,24,293	0/0:32,0:32:8.98:0,9,91	0/0:30,0:30:25.24:0,25,256	./.	0/0:22,0:22:8.05:0,8,55	0/0:23,0:23:9.41:0,9,78	0/0:15,0:22:5.84:0,6,68	0/0:26,0:26:15.01:0,15,158	0/0:19,0:19:9.01:0,9,104	1/1:15,3:18:15.02:153,15,0	1/1:11,4:16:11.86:111,12,0	0/0:24,0:23:9.03:0,9,111	0/0:16,0:15:0.47:0,0,1	0/0:44,0:44:8.16:0,8,87	0/0:23,0:23:3.89:0,4,35	0/0:20,0:20:3.01:0,3,44	0/0:25,0:25:18.06:0,18,151	0/0:18,0:18:5.61:0,6,52	0/0:24,0:24:17.80:0,18,189	0/0:24,0:24:26.26:0,26,257	0/0:3,0:3:3.01:0,3,41
chr10	51969893	.	T	TG	4179.79	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-13.842;DP=511;FS=4.435;HRun=1;HaplotypeScore=45.5583;InbreedingCoeff=0.9962;MQ=77.26;MQ0=0;MQRankSum=0.019;QD=40.19;ReadPosRankSum=2.805;VQSLOD=4.1052;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:39.13:0,39,506	1/1:0,11:11:30.10:450,30,0	0/0:10,0:10:27.06:0,27,326	0/0:10,0:10:22.07:0,22,267	0/0:26,0:26:75.21:0,75,944	0/0:16,0:16:48.16:0,48,623	0/0:10,0:10:30.10:0,30,390	0/0:32,0:32:93.30:0,93,1206	0/0:11,0:11:33.09:0,33,413	0/0:31,0:31:93.29:0,93,1185	0/0:23,0:23:69.22:0,69,895	0/0:16,0:16:48.14:0,48,609	0/0:12,0:12:36.12:0,36,467	0/0:17,0:17:51.17:0,51,661	1/1:0,24:24:63.21:944,63,0	1/1:0,17:17:51.17:764,51,0	1/1:0,33:33:87.29:1304,87,0	1/1:1,18:19:48.16:718,48,0	0/0:20,0:20:35.86:0,36,628	0/0:35,0:35:99:0,102,1284	0/0:8,0:8:21.07:0,21,272	0/0:8,0:8:24.08:0,24,311	0/0:20,0:20:60.20:0,60,779	0/0:7,0:7:21.06:0,21,259	0/0:22,0:22:66.21:0,66,857	0/0:25,0:25:72.23:0,72,935	0/0:25,0:25:75.24:0,75,973	0/0:10,0:10:30.10:0,30,389
chr10	51971978	.	TA	T	2343.94	PASS	AB=0.653;AC=11;AF=0.196;AN=56;BaseQRankSum=9.068;DP=626;FS=9.406;HRun=9;HaplotypeScore=79.7730;InbreedingCoeff=0.8988;MQ=76.38;MQ0=0;MQRankSum=0.948;QD=16.28;ReadPosRankSum=1.169;VQSLOD=3.2503;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:15,17:32:8.62:455,0,9	0/0:10,0:10:27.07:0,27,304	0/0:24,0:23:38.29:0,38,460	0/0:21,0:18:32.34:0,32,322	0/0:36,0:36:86.94:0,87,972	0/0:20,0:20:54.99:0,55,580	0/0:25,0:25:66.20:0,66,761	1/1:15,20:35:43.99:531,44,0	0/0:23,0:23:60.18:0,60,692	0/0:21,0:21:45.12:0,45,503	0/0:18,0:18:48.03:0,48,493	0/0:23,0:23:66.19:0,66,758	0/0:30,0:30:84.23:0,84,958	0/0:29,0:29:87.22:0,87,989	0/0:16,0:16:48.14:0,48,554	0/0:19,0:19:48.14:0,48,554	0/0:35,0:35:96.25:0,96,1079	0/0:19,0:19:45.12:0,45,508	1/1:3,15:18:45.01:412,45,0	1/1:6,16:22:44.80:412,45,0	1/1:4,7:11:18.01:165,18,0	0/0:9,0:9:24.06:0,24,268	0/0:26,0:26:67.13:0,67,654	0/0:20,0:20:54.16:0,54,623	0/0:22,0:22:63.15:0,63,696	0/0:24,0:24:60.15:0,60,668	1/1:3,23:26:60.03:549,60,0	0/0:12,0:12:36.11:0,36,415
chr10	51974421	.	TC	T	5809.66	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=10.989;DP=565;FS=7.312;HRun=9;HaplotypeScore=66.9502;InbreedingCoeff=0.9802;MQ=77.37;MQ0=0;MQRankSum=-0.223;QD=19.05;ReadPosRankSum=3.277;VQSLOD=5.1791;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:90.24:0,90,1018	1/1:0,7:7:21.01:192,21,0	0/0:17,0:16:9.46:0,9,300	0/0:16,2:18:31.20:0,31,322	0/0:25,0:25:63.17:0,63,718	0/0:17,0:17:48.14:0,48,554	0/0:22,0:22:57.17:0,57,658	1/1:5,24:29:66:594,66,0	0/0:18,0:18:51.14:0,51,579	0/0:18,0:18:48.14:0,48,554	0/0:23,0:23:51.13:0,51,571	1/1:24,0:24:20.69:253,21,0	1/1:13,0:13:29.09:163,29,0	0/0:19,0:19:44.72:0,45,494	1/1:1,15:16:45.02:412,45,0	1/1:2,16:18:39.02:357,39,0	1/1:2,27:29:75.04:686,75,0	1/1:4,14:18:7.42:322,7,0	1/1:3,11:14:33:296,33,0	1/1:3,19:22:57.02:521,57,0	1/1:1,30:31:84.05:769,84,0	1/1:20,0:20:40.30:226,40,0	1/1:19,0:19:37.86:210,38,0	1/1:23,0:23:52.30:287,52,0	0/0:13,0:13:39.12:0,39,449	0/0:13,0:13:27.07:0,27,303	1/1:3,19:22:57.03:521,57,0	0/0:14,0:14:39.12:0,39,450
chr10	51974430	.	CT	C	3055.44	PASS	AB=1.000;AC=20;AF=0.357;AN=56;BaseQRankSum=14.157;DP=596;FS=0.399;HRun=1;HaplotypeScore=79.8766;InbreedingCoeff=0.4197;MQ=84.94;MQ0=0;MQRankSum=-2.236;QD=10.32;ReadPosRankSum=7.852;VQSLOD=1.0351;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,111,1397	1/1:7,0:7:8.23:35,8,0	0/0:25,0:24:66.32:0,66,740	0/0:22,0:23:51.92:0,52,576	0/0:27,0:27:78.14:0,78,1013	0/0:19,0:19:57.14:0,57,758	0/0:21,0:21:60.19:0,60,841	0/1:30,0:30:0.21:0,0,145	0/0:25,0:25:75.13:0,75,924	0/0:20,0:20:60.14:0,60,791	0/0:21,0:21:57.12:0,57,738	1/1:1,20:21:14.43:706,14,0	1/1:0,13:13:29.86:415,30,0	0/0:18,0:18:50.76:0,51,667	0/1:17,0:17:28.86:31,0,29	0/1:17,0:17:10.98:17,0,11	0/1:30,0:30:14.98:42,0,15	0/1:17,0:17:15.09:15,0,69	0/0:15,0:15:12.01:0,12,106	0/1:21,0:21:18.54:28,0,19	0/1:36,0:36:26.92:27,0,104	1/1:0,22:22:45.08:587,45,0	1/1:0,18:18:39.13:541,39,0	1/1:0,24:25:54.18:749,54,0	0/0:13,0:13:39.12:0,39,541	0/0:17,0:17:45.09:0,45,532	0/1:22,0:22:6.95:55,0,7	0/0:16,0:16:45.09:0,45,597
chr10	51974900	.	T	TAGG	11806.75	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-6.745;DP=670;FS=6.690;HRun=0;HaplotypeScore=98.7666;InbreedingCoeff=0.9997;MQ=71.15;MQ0=0;MQRankSum=-5.764;QD=54.41;ReadPosRankSum=-0.474;VQSLOD=6.8854;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:90.17:0,90,1433	1/1:1,11:13:24.08:553,24,0	0/0:24,0:24:50.70:0,51,708	0/0:29,0:27:45.67:0,46,699	0/0:29,0:29:81.26:0,81,1355	0/0:29,0:29:78.27:0,78,1330	0/0:29,0:29:87.28:0,87,1442	1/1:6,16:24:60.16:1212,60,0	0/0:20,0:20:60.14:0,60,955	0/0:26,0:26:75.25:0,75,1246	0/0:15,0:15:45.15:0,45,761	0/0:21,0:21:60.20:0,60,997	0/0:31,0:31:90.29:0,90,1497	0/0:28,0:28:84.22:0,84,1353	1/1:1,23:28:69.23:1520,69,0	1/1:2,19:21:51.13:1126,51,0	1/1:0,18:18:42.14:968,42,0	1/1:1,19:20:54.19:1240,54,0	1/1:4,10:14:42.14:922,42,0	1/1:2,21:24:69.23:1455,69,0	1/1:3,24:27:60.08:1202,60,0	0/0:28,0:28:81.28:0,81,1377	0/0:14,0:14:42.14:0,42,711	0/0:32,0:32:93.26:0,93,1521	0/0:24,0:24:72.24:0,72,1205	0/0:28,0:28:84.28:0,84,1408	1/1:3,25:27:72.20:1610,72,0	0/0:14,0:14:42.12:0,42,682
chr10	51975829	.	TCTGAGCTGCATGGATGG	T	7478.51	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=12.183;DP=740;FS=5.621;HRun=0;HaplotypeScore=332.9803;InbreedingCoeff=0.9976;MQ=89.93;MQ0=0;MQRankSum=-8.409;QD=72.61;ReadPosRankSum=0.307;VQSLOD=3.7724;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,129,9841	0/0:16,0:16:48.16:0,48,3827	0/0:42,0:42:99:0,114,6669	0/0:30,0:30:49.81:0,50,4920	0/0:20,0:20:51.16:0,51,3733	0/0:17,0:17:51.18:0,51,4183	0/0:23,0:23:66.23:0,66,4694	1/1:11,9:20:27.05:782,27,0	0/0:30,0:30:81.28:0,81,6392	0/0:25,0:25:75.25:0,75,4934	0/0:27,0:27:81.28:0,81,6267	0/0:36,0:36:99:0,105,7767	0/0:21,0:21:63.22:0,63,5017	0/0:31,0:31:90.31:0,90,7053	0/0:31,0:31:90.31:0,90,7132	0/0:39,0:39:99:0,114,8502	0/0:28,0:28:81.28:0,81,6451	0/0:16,0:16:48.16:0,48,3584	1/1:6,9:15:27.08:1007,27,0	1/1:5,15:20:42.14:1849,42,0	1/1:7,12:19:18.06:886,18,0	0/0:30,0:30:87.30:0,87,6600	0/0:22,0:22:57.20:0,57,4349	0/0:27,0:26:78.27:0,78,6146	0/0:41,0:41:99:0,111,8647	0/0:28,0:28:81.28:0,81,6077	1/1:7,22:29:60.21:2954,60,0	0/0:11,0:11:33.11:0,33,2545
chr10	51976882	.	GTC	G	1465.14	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=8.350;DP=738;FS=4.256;HRun=0;HaplotypeScore=128.6410;InbreedingCoeff=0.9803;MQ=86.69;MQ0=0;MQRankSum=-4.164;QD=36.63;ReadPosRankSum=-0.010;VQSLOD=5.0526;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,40:40:96.33:1560,96,0	0/0:7,0:7:21.07:0,21,426	0/0:30,0:30:87.15:0,87,1538	0/0:22,0:22:54.69:0,55,1099	0/0:25,0:25:75.26:0,75,1522	0/0:21,0:21:63.20:0,63,1232	0/0:25,0:25:75.26:0,75,1511	0/0:42,0:42:99:0,123,2365	0/0:36,0:36:99:0,108,2157	0/0:28,0:28:84.28:0,84,1666	0/0:20,0:20:60.21:0,60,1203	0/0:25,0:25:75.24:0,75,1487	0/0:36,0:36:99:0,108,2090	0/0:30,0:30:90.30:0,90,1788	0/0:31,0:31:93.32:0,93,1866	0/0:24,0:24:72.21:0,72,1343	0/0:38,0:38:99:0,114,2275	0/0:25,0:24:75.24:0,75,1485	0/0:22,0:22:66.18:0,66,1274	0/0:31,0:31:93.29:0,93,1802	0/0:36,0:36:99:0,102,1956	0/0:11,0:11:33.11:0,33,670	0/0:14,0:14:42.14:0,42,840	0/0:35,0:35:99:0,102,2020	0/0:20,0:20:60.18:0,60,1128	0/0:29,0:29:87.30:0,87,1758	0/0:30,0:30:90.24:0,90,1664	0/0:5,0:5:15.05:0,15,304
chr10	51977384	.	GACAC	G	1749.20	PASS	AB=0.742;AC=13;AF=0.232;AN=56;BaseQRankSum=-0.556;DP=689;FS=4.001;HRun=0;HaplotypeScore=126.0507;InbreedingCoeff=0.4387;MQ=66.30;MQ0=11;MQRankSum=0.826;QD=8.88;ReadPosRankSum=3.061;VQSLOD=2.8534;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:36:12.02:0,12,248	1/1:4,3:7:6.02:96,6,0	0/0:41,0:18:3.90:0,4,74	0/0:44,0:21:6.02:0,6,107	0/0:15,0:18:26.56:0,27,483	0/0:18,0:19:26.83:0,27,494	0/0:19,0:19:18.06:0,18,402	0/0:48,0:48:60.16:0,60,951	0/0:25,0:26:50.89:0,51,1003	0/0:28,0:28:47.38:0,47,919	0/0:8,0:8:9.01:0,9,164	0/1:15,1:27:14.92:15,0,99	0/1:13,0:26:6.12:6,0,89	0/0:19,0:19:35.87:0,36,775	1/1:10,17:28:36.12:547,36,0	1/1:13,14:28:33.11:507,33,0	0/1:19,10:28:22.45:221,0,22	1/1:3,13:16:30.10:479,30,0	0/0:19,0:19:24.08:0,24,379	0/0:19,0:19:33.11:0,33,545	0/0:39,0:37:63.21:0,63,995	0/0:7,0:9:14.95:0,15,115	0/1:5,1:10:36.35:36,0,54	0/0:34,0:38:59.11:0,59,1005	0/0:15,0:15:23.97:0,24,427	0/1:24,1:25:12.29:12,0,554	0/0:33,0:33:33.58:0,34,520	0/0:10,0:10:12.02:0,12,180
chr10	51977390	.	C	CAG	4020.16	PASS	AB=0.538;AC=9;AF=0.161;AN=56;BaseQRankSum=-11.480;DP=696;FS=7.595;HRun=0;HaplotypeScore=103.2231;InbreedingCoeff=0.8634;MQ=60.90;MQ0=11;MQRankSum=3.703;QD=24.36;ReadPosRankSum=-0.880;VQSLOD=3.6837;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:35:31.93:0,32,254	0/0:5,0:5:11.93:0,12,89	0/0:41,0:18:38.63:0,39,454	0/0:49,0:20:33.28:0,33,359	0/0:17,0:17:31.03:0,31,468	0/0:18,0:18:50.67:0,51,487	0/0:19,0:19:53.98:0,54,547	1/1:5,44:50:64.54:1252,65,0	0/0:26,0:26:72.03:0,72,827	0/0:28,0:27:76.86:0,77,851	0/0:8,0:8:17.97:0,18,165	0/0:26,0:26:65.78:0,66,515	0/0:25,0:25:47.65:0,48,366	0/0:17,0:17:44.39:0,44,513	0/0:30,0:30:46.53:0,47,483	0/0:23,0:23:56.62:0,57,418	0/0:29,0:28:56.55:0,57,438	0/0:16,0:16:35.65:0,36,249	1/1:2,16:19:50.96:595,51,0	0/1:3,18:21:12.52:482,0,13	1/1:6,36:41:53.20:1136,53,0	0/0:9,0:8:20.58:0,21,156	0/0:14,0:13:23.90:0,24,183	0/0:41,0:41:98.84:0,99,970	0/0:18,0:18:42.01:0,42,432	0/0:23,0:23:64.74:0,65,609	1/1:2,30:32:22.06:555,22,0	0/0:12,0:12:35.73:0,36,290
chr10	51979735	.	AAAAG	A	1195.31	PASS	AC=18;AF=0.360;AN=50;BaseQRankSum=3.305;DP=390;FS=0.000;HRun=0;HaplotypeScore=64.5710;InbreedingCoeff=0.7866;MQ=57.40;MQ0=3;MQRankSum=0.253;QD=10.49;ReadPosRankSum=0.434;VQSLOD=2.4252;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:33.09:0,33,715	1/1:3,0:5:3:28,3,0	./.	./.	1/1:11,5:16:15.05:227,15,0	1/1:5,4:9:9.03:136,9,0	1/1:12,0:11:7.78:52,8,0	./.	0/0:10,0:10:15:0,15,242	0/0:12,0:12:21.07:0,21,429	0/0:13,0:19:15:0,15,227	0/0:13,0:13:15.05:0,15,322	0/0:19,0:21:33.11:0,33,697	1/1:7,6:13:9.03:136,9,0	1/1:6,6:12:6.02:91,6,0	1/1:3,0:9:2.75:28,3,0	0/0:12,0:19:6.02:0,6,108	0/0:9,0:10:15.03:0,15,274	0/0:10,0:10:3.01:0,3,49	0/0:19,0:23:23.99:0,24,301	0/0:5,0:8:8.98:0,9,118	0/0:8,0:8:9.03:0,9,193	0/0:15,0:15:12.04:0,12,268	0/0:16,0:16:21.07:0,21,449	1/1:11,10:21:21.03:292,21,0	1/1:8,9:17:27.08:386,27,0	0/0:14,0:16:21.03:0,21,279	0/0:15,0:15:6.02:0,6,139
chr10	51980389	.	G	GA	1516.71	PASS	AB=0.844;AC=14;AF=0.250;AN=56;BaseQRankSum=-5.947;DP=684;FS=4.145;HRun=13;HaplotypeScore=82.6922;InbreedingCoeff=0.2648;MQ=72.24;MQ0=1;MQRankSum=-0.017;QD=6.14;ReadPosRankSum=0.199;VQSLOD=2.6288;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:46:63.03:0,63,182	0/0:10,0:10:19.57:0,20,127	0/1:14,0:15:6.63:35,0,7	0/1:13,0:12:13.50:13,0,18	0/1:25,3:27:5.22:5,0,257	0/0:24,1:26:18.70:0,19,266	0/0:26,0:28:40.77:0,41,334	0/0:33,0:33:56.30:0,56,387	0/0:23,2:26:5.38:0,5,279	0/1:26,3:30:34.03:34,0,223	0/0:29,0:31:42.55:0,43,277	0/1:10,16:26:14.14:168,0,14	1/1:8,23:32:25.55:359,26,0	0/0:25,0:27:44.66:0,45,285	0/0:26,1:32:30.71:0,31,324	0/0:19,0:21:51.62:0,52,339	0/0:26,0:27:52.38:0,52,350	0/0:16,0:17:30.80:0,31,210	0/0:11,0:12:16.84:0,17,108	0/0:22,1:25:23.72:0,24,292	0/0:15,1:17:9.86:0,10,204	0/1:9,14:24:8.30:201,0,8	1/1:11,13:24:9.45:230,9,0	1/1:1,33:35:62.23:603,62,0	0/1:9,1:10:7.02:7,0,102	0/0:31,0:35:46.56:0,47,290	0/0:20,1:22:6.77:0,7,183	0/1:6,1:8:27.54:28,0,47
chr10	51983112	.	CTT	C	1705.90	PASS	AB=0.747;AC=25;AF=0.446;AN=56;BaseQRankSum=6.494;DP=519;FS=0.000;HRun=16;HaplotypeScore=72.1243;InbreedingCoeff=0.7638;MQ=64.00;MQ0=6;MQRankSum=-1.846;QD=6.14;ReadPosRankSum=5.550;VQSLOD=-0.5086;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:22,20:46:38.18:298,38,0	1/1:1,7:9:17.71:137,18,0	0/1:21,1:10:7.25:7,0,98	0/0:15,0:9:11.60:0,12,72	0/0:14,0:18:21.52:0,22,179	0/0:16,0:19:35.44:0,35,396	0/0:20,1:23:10.32:0,10,325	1/1:8,1:29:46.39:199,46,0	0/0:13,0:13:17.98:0,18,196	0/0:14,0:18:36.66:0,37,359	0/0:14,0:17:29.38:0,29,306	0/0:7,0:13:13.17:0,13,98	0/1:5,1:17:1.99:2,0,61	0/0:16,0:17:32.99:0,33,377	1/1:2,8:11:17.64:137,18,0	1/1:3,3:7:8.53:62,9,0	1/1:9,18:32:46.73:348,47,0	1/1:8,11:19:35.57:287,36,0	1/1:4,2:14:22.35:120,22,0	1/1:7,0:21:27.23:117,27,0	1/1:6,0:11:2.57:12,3,0	0/0:12,0:21:11.97:0,12,68	0/1:9,0:13:24.99:27,0,25	0/0:5,0:19:24.46:0,24,100	0/0:16,0:23:46.76:0,47,474	0/0:12,0:14:27.49:0,27,316	1/1:7,0:23:38.09:164,38,0	0/0:7,0:9:23.43:0,23,266
chr10	51983535	.	T	TAC	321.92	PASS	AB=0.924;AC=23;AF=0.500;AN=46;BaseQRankSum=-0.689;DP=620;FS=15.473;HRun=0;HaplotypeScore=93.1945;InbreedingCoeff=0.1505;MQ=52.14;MQ0=17;MQRankSum=1.504;QD=0.91;ReadPosRankSum=-3.089;VQSLOD=-0.1019;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:37,0:37:2.52:42,3,0	0/0:9,0:12:2.84:0,3,14	./.	./.	0/1:19,9:28:0.72:39,0,1	0/1:29,0:29:25.06:25,0,71	0/0:28,0:26:15.48:0,15,107	./.	0/0:19,0:19:17.46:0,17,148	0/1:22,0:22:9.58:10,0,55	0/0:11,0:11:2.48:0,2,31	0/1:10,7:16:26.41:37,0,26	1/1:12,0:12:7.35:52,7,0	0/0:10,0:19:1.49:0,1,11	1/1:19,0:28:0.89:2,1,0	0/1:10,0:20:10.14:10,0,41	1/1:18,0:21:4.21:23,4,0	0/0:16,0:16:3.68:0,4,15	./.	0/1:19,0:22:0.01:0,0,0	1/1:34,0:33:1.88:18,2,0	1/1:19,0:19:4.19:65,4,0	./.	1/1:19,13:31:3.01:44,3,0	1/1:11,1:12:8.87:79,9,0	0/0:23,0:22:10.03:0,10,62	0/0:16,0:20:1.66:0,2,31	0/1:17,0:17:11:11,0,26
chr10	51985621	.	CACAG	C	4748.42	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=14.854;DP=1028;FS=2.308;HRun=0;HaplotypeScore=185.9109;InbreedingCoeff=0.9997;MQ=58.81;MQ0=3;MQRankSum=1.188;QD=33.68;ReadPosRankSum=6.425;VQSLOD=4.9789;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:57:99:0,126,2960	1/1:0,17:17:39.01:599,39,0	0/0:67,0:45:99:0,107,2091	0/0:53,0:42:99:0,101,2052	0/0:36,0:36:99:0,102,2402	0/0:23,0:23:66.18:0,66,1523	0/0:37,0:37:99:0,99,2259	0/0:48,0:48:99:0,117,2578	0/0:50,0:50:99:0,126,2984	0/0:46,0:46:99:0,123,2684	0/0:30,0:30:81.25:0,81,1926	0/0:34,0:34:93.14:0,93,2169	0/0:33,0:33:90.28:0,90,2157	0/0:31,0:31:81.23:0,81,2004	1/1:3,40:43:74.78:1211,75,0	1/1:2,33:35:75.22:1313,75,0	1/1:4,23:27:51.04:844,51,0	1/1:6,13:19:46.03:781,46,0	0/0:31,0:29:81.04:0,81,1806	0/0:30,0:30:78.22:0,78,1804	0/0:79,0:78:99:0,208,4827	0/0:39,0:39:99:0,108,2665	0/0:17,0:17:48.15:0,48,1190	0/0:43,0:42:99:0,111,2584	0/0:23,0:24:58.68:0,59,1417	0/0:34,0:34:93.28:0,93,2175	0/0:36,0:35:99:0,99,2222	0/0:9,0:9:27.08:0,27,647
chr10	51994472	.	G	GGTGTGT	607.09	PASS	AB=1.000;AC=20;AF=0.385;AN=52;BaseQRankSum=1.395;DP=631;FS=3.839;HRun=0;HaplotypeScore=151.6602;InbreedingCoeff=0.1070;MQ=67.60;MQ0=18;MQRankSum=-1.141;QD=1.71;ReadPosRankSum=1.007;VQSLOD=2.5568;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:31,0:29:53.28:152,0,53	0/0:5,0:5:2.69:0,3,8	./.	./.	0/0:24,0:25:8.18:0,8,170	0/1:19,0:19:4.08:4,0,146	0/1:27,0:26:29.09:29,0,130	1/1:40,0:39:0.47:1,0,0	0/1:23,0:24:11.33:62,0,11	0/1:17,0:16:34.46:34,0,97	0/0:14,0:15:16.85:0,17,183	0/1:27,0:27:5.06:9,0,5	0/1:15,0:15:0.45:0,0,100	0/0:18,0:18:8.21:0,8,79	1/1:21,0:21:9.19:94,9,0	1/1:22,0:22:9.23:65,9,0	1/1:13,7:24:9.09:209,9,0	1/1:22,0:21:6.40:59,6,0	0/0:11,0:11:0.69:0,1,2	0/0:19,0:19:12.33:0,12,213	0/0:45,0:41:2.87:0,3,24	0/0:20,0:19:12.12:0,12,131	0/1:25,0:26:0.96:1,0,159	0/0:30,0:31:32.33:0,32,408	0/1:19,0:18:19.55:20,0,128	0/1:22,0:22:15.76:16,0,97	0/0:17,0:16:6.74:0,7,55	0/0:15,0:13:6.46:0,6,70
chr10	51995944	.	C	CAGAG	5923.63	PASS	AB=0.714;AC=18;AF=0.321;AN=56;BaseQRankSum=-1.412;DP=897;FS=0.740;HRun=0;HaplotypeScore=154.8460;InbreedingCoeff=0.6693;MQ=57.77;MQ0=20;MQRankSum=-0.360;QD=16.41;ReadPosRankSum=-0.702;VQSLOD=4.5793;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:37:60.01:0,60,941	1/1:0,0:12:10.98:50,11,0	0/0:32,0:9:8.75:0,9,81	0/1:60,0:7:4.29:4,0,75	0/0:39,0:39:65.17:0,65,1104	0/0:31,0:33:63.18:0,63,973	0/0:19,0:21:4.16:0,4,466	1/1:16,27:48:99:1725,104,0	0/0:38,0:39:69.14:0,69,1097	0/0:44,0:45:99:0,114,1787	0/0:20,0:19:42.14:0,42,697	0/0:23,0:23:48.13:0,48,744	0/0:31,0:33:66.18:0,66,1018	0/0:28,0:28:48.13:0,48,719	1/1:13,0:38:49.40:224,49,0	0/1:9,0:29:45.83:130,0,46	0/1:9,0:21:24.29:82,0,24	1/1:4,0:21:36:192,36,0	0/1:9,12:21:4.76:738,0,5	1/1:9,24:34:35.86:826,36,0	1/1:10,27:40:47.75:1080,48,0	0/0:41,0:43:78.20:0,78,1174	0/0:30,0:30:69.22:0,69,1098	0/0:37,0:40:53.08:0,53,1165	0/0:26,0:27:42.12:0,42,652	0/0:26,0:28:35.60:0,36,690	1/1:9,23:35:41.58:872,42,0	0/0:13,0:14:7.61:0,8,388
chr10	51997419	.	G	GCAGA	8493.14	PASS	AB=0.697;AC=20;AF=0.357;AN=56;BaseQRankSum=0.112;DP=746;FS=6.701;HRun=0;HaplotypeScore=117.7149;InbreedingCoeff=0.8315;MQ=69.61;MQ0=3;MQRankSum=0.003;QD=27.66;ReadPosRankSum=1.038;VQSLOD=4.5169;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:16,1:39:22.14:326,22,0	1/1:16,0:16:21.07:377,21,0	0/0:39,0:33:37.33:0,37,494	0/0:33,0:28:30.09:0,30,393	0/0:26,0:27:45.12:0,45,659	0/0:24,0:25:48.14:0,48,704	0/0:22,0:22:39.12:0,39,607	0/1:24,8:35:14.84:453,0,15	0/0:28,0:28:45.06:0,45,670	0/0:36,0:36:75.20:0,75,1067	0/0:15,0:15:36.10:0,36,532	0/0:28,0:28:51.14:0,51,752	0/0:23,0:23:48.16:0,48,752	0/0:23,0:23:24.03:0,24,638	1/1:32,0:32:60.21:1071,60,0	1/1:28,0:28:42.14:744,42,0	1/1:27,0:27:42.14:768,42,0	1/1:20,0:20:33.11:593,33,0	1/1:6,15:21:45.15:1004,45,0	1/1:3,17:24:51.11:1175,51,0	0/1:8,11:19:56.98:671,0,57	0/0:24,0:26:48.10:0,48,701	0/0:18,0:18:24.08:0,24,386	0/0:28,0:28:32.20:0,32,799	0/0:20,0:20:33.09:0,33,509	0/0:39,0:40:28.85:0,29,1133	1/1:16,27:45:11.59:1312,12,0	0/0:8,0:8:9.03:0,9,146
chr10	51997430	.	G	GACAA	8217.59	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=-0.349;DP=752;FS=9.826;HRun=0;HaplotypeScore=122.0834;InbreedingCoeff=0.5726;MQ=67.59;MQ0=3;MQRankSum=-1.131;QD=26.59;ReadPosRankSum=9.268;VQSLOD=2.9870;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:35,0:35:67.31:124,0,67	1/1:2,15:17:27.01:607,27,0	0/0:48,0:41:90.24:0,90,1221	0/0:38,0:31:68.65:0,69,959	0/0:22,0:22:60.11:0,60,930	0/0:26,0:26:78.10:0,78,1114	0/0:21,0:21:60.11:0,60,897	0/1:31,0:31:99:182,0,398	0/0:27,0:27:78.04:0,78,1092	0/0:33,0:33:93.28:0,93,1560	0/0:21,0:21:57.10:0,57,841	0/0:27,0:27:78.07:0,78,1156	0/0:21,0:21:57.15:0,57,976	0/0:21,0:21:55.01:0,55,890	1/1:0,36:38:60.21:1618,60,0	1/1:1,26:28:42.14:1133,42,0	1/1:0,29:30:42.14:1132,42,0	1/1:1,19:21:36.10:905,36,0	0/1:23,0:23:99:527,0,127	1/1:23,0:23:13.19:757,13,0	0/1:19,0:19:99:412,0,143	0/0:23,0:23:63.14:0,63,981	0/0:15,0:15:45.02:0,45,621	0/0:35,0:35:87.13:0,87,1328	0/0:20,0:20:54.09:0,54,792	0/0:37,0:37:75.85:0,76,1680	0/1:44,0:43:99:822,0,186	0/0:8,0:8:23.92:0,24,278
chr10	51997723	.	G	GCA	1250.30	PASS	AB=0.889;AC=23;AF=0.460;AN=50;BaseQRankSum=-0.602;DP=555;FS=6.659;HRun=0;HaplotypeScore=83.2905;InbreedingCoeff=0.1937;MQ=61.81;MQ0=10;MQRankSum=-0.080;QD=3.80;ReadPosRankSum=-1.656;VQSLOD=1.3883;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:33:5.66:178,0,6	0/1:6,2:9:16.95:40,0,17	./.	./.	0/0:21,0:24:11.67:0,12,83	1/1:15,0:15:6.01:69,6,0	0/1:18,2:20:78.41:80,0,78	1/1:24,0:24:4.21:23,4,0	0/0:13,0:18:17.53:0,18,130	0/0:20,0:20:3:0,3,32	0/0:10,0:10:9.02:0,9,96	0/0:16,0:16:6.55:0,7,26	0/0:21,0:24:11.74:0,12,54	0/0:12,0:12:3.01:0,3,32	0/1:24,5:28:51.93:76,0,52	0/1:12,8:20:51.91:76,0,52	0/1:26,1:36:13.50:147,0,13	1/1:7,2:9:21.01:244,21,0	1/1:15,0:15:12.02:134,12,0	1/1:24,0:23:11.67:82,12,0	1/1:14,0:13:6:51,6,0	0/1:22,0:23:11.73:12,0,20	0/1:13,0:13:0:0,0,0	0/0:20,0:27:16.80:0,17,84	0/0:16,0:16:9.96:0,10,97	0/1:27,0:27:17.09:54,0,17	1/1:17,0:17:12.03:149,12,0	./.
chr10	51997848	.	CTG	C	5044.59	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=11.592;DP=674;FS=5.331;HRun=0;HaplotypeScore=85.9181;InbreedingCoeff=0.9992;MQ=80.67;MQ0=1;MQRankSum=-2.969;QD=39.72;ReadPosRankSum=-0.282;VQSLOD=6.2710;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:78.15:0,78,1469	0/0:9,0:9:27.09:0,27,521	0/0:26,0:26:70.02:0,70,1347	0/0:29,0:27:66.78:0,67,1081	0/0:12,0:12:36.12:0,36,678	0/0:17,0:17:51.14:0,51,908	0/0:25,0:25:75.22:0,75,1349	1/1:0,28:28:81.26:1212,81,0	0/0:28,0:28:78.27:0,78,1489	0/0:27,0:27:75.26:0,75,1445	0/0:9,0:9:27.08:0,27,488	0/0:28,0:28:84.29:0,84,1621	0/0:28,0:28:84.29:0,84,1601	0/0:30,0:30:90.31:0,90,1736	0/0:41,0:41:99:0,117,2250	0/0:27,0:27:75.22:0,75,1401	0/0:34,0:33:99:0,99,1910	0/0:18,0:18:54.15:0,54,1003	1/1:2,16:18:48.13:677,48,0	1/1:0,13:13:29.98:459,30,0	1/1:2,39:41:99:1640,108,0	0/0:20,0:20:60.21:0,60,1147	0/0:17,0:17:48.14:0,48,848	0/0:41,0:41:99:0,120,2210	0/0:14,0:14:42.14:0,42,811	0/0:23,0:23:66.23:0,66,1259	1/1:0,27:26:69.23:1056,69,0	0/0:11,0:11:30.10:0,30,579
chr10	52000481	.	G	GGT	429.21	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=3.202;DP=574;FS=2.218;HRun=0;HaplotypeScore=108.0109;InbreedingCoeff=0.9656;MQ=70.01;MQ0=8;MQRankSum=-4.081;QD=15.90;ReadPosRankSum=-0.931;VQSLOD=3.2854;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:39:54.14:0,54,662	0/0:7,0:7:15.04:0,15,189	0/0:35,0:20:33.10:0,33,406	0/0:29,0:18:29.56:0,30,324	0/0:29,0:29:69.18:0,69,842	0/0:16,0:16:45.11:0,45,540	0/0:27,0:27:33.19:0,33,657	0/0:28,0:27:63.17:0,63,750	0/0:22,0:22:55.05:0,55,671	0/0:22,0:21:45.13:0,45,556	0/0:19,0:19:53.20:0,53,650	0/0:20,0:20:42.11:0,42,523	0/0:18,0:18:23.88:0,24,287	0/0:19,0:19:54.14:0,54,651	0/0:16,0:16:30.10:0,30,378	0/0:21,0:21:33.11:0,33,416	1/1:17,4:21:18.83:327,19,0	1/1:5,1:5:15.05:218,15,0	0/0:19,0:18:48.14:0,48,583	0/0:12,0:12:36.12:0,36,454	0/0:36,0:35:93.27:0,93,1137	0/0:11,0:12:23.89:0,24,265	0/0:18,0:18:36.08:0,36,420	0/0:12,0:12:21.05:0,21,250	0/0:23,0:23:51.15:0,51,630	0/0:17,0:17:36.10:0,36,443	0/0:22,0:22:57.18:0,57,716	0/0:7,0:8:14.42:0,14,199
chr10	52000493	.	TCTGA	T	323.09	PASS	AB=0.900;AC=5;AF=0.089;AN=56;BaseQRankSum=5.759;DP=593;FS=0.875;HRun=0;HaplotypeScore=126.4704;InbreedingCoeff=0.3445;MQ=59.43;MQ0=12;MQRankSum=-4.531;QD=4.09;ReadPosRankSum=-2.631;VQSLOD=1.1869;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:43,0:42:10.91:11,0,835	0/1:8,0:8:9.98:10,0,145	0/0:31,0:12:35.89:0,36,560	0/0:29,0:13:25.32:0,25,356	0/0:32,0:32:86.96:0,87,1917	0/0:19,0:19:54.16:0,54,1205	0/0:22,0:22:35.87:0,36,1190	0/0:30,0:28:87.08:0,87,1512	0/0:23,0:23:66.21:0,66,1621	0/0:21,0:20:56.54:0,57,1245	0/0:20,0:21:54.07:0,54,1231	0/0:20,0:20:51.15:0,51,915	0/0:15,0:15:13.08:0,13,437	0/0:26,0:26:46.68:0,47,1468	0/0:12,0:12:21.45:0,21,188	0/0:18,0:18:24.33:0,24,384	1/1:9,12:21:17.58:272,18,0	0/1:4,3:6:52.31:148,0,52	0/0:22,0:21:22.92:0,23,1027	0/0:13,0:13:39.03:0,39,906	0/0:40,0:39:99:0,111,2592	0/0:13,0:13:29.82:0,30,534	0/0:17,0:17:39.10:0,39,723	0/0:19,0:18:31.34:0,31,605	0/0:20,0:20:54.14:0,54,1138	0/0:19,0:18:48.63:0,49,1179	0/0:24,0:24:68.97:0,69,1544	0/0:8,0:8:20.98:0,21,410
chr10	52000497	.	A	AGT	1416.82	PASS	AB=0.889;AC=16;AF=0.296;AN=54;BaseQRankSum=-4.670;DP=587;FS=2.432;HRun=0;HaplotypeScore=104.6332;InbreedingCoeff=-0.0164;MQ=57.38;MQ0=15;MQRankSum=1.271;QD=4.75;ReadPosRankSum=-0.697;VQSLOD=2.6578;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:34,0:41:17.53:157,18,0	0/0:4,0:8:7.72:0,8,34	0/0:29,0:9:2.90:0,3,16	./.	0/0:30,0:32:77.46:0,77,755	0/0:16,0:18:13.86:0,14,316	0/0:15,0:21:44.31:0,44,392	0/1:26,0:25:32.03:115,0,32	0/0:22,0:23:31.50:0,32,490	0/1:17,0:18:14.19:14,0,248	0/0:21,0:21:32.98:0,33,320	1/1:10,10:20:0.18:425,0,0	1/1:7,8:15:10.74:156,11,0	0/0:26,0:27:16.34:0,16,522	0/0:3,0:12:19.89:0,20,98	0/0:9,0:18:8.52:0,9,42	0/0:19,0:21:5.57:0,6,33	0/0:7,0:6:7.94:0,8,32	0/1:23,0:22:26.30:26,0,61	0/0:16,0:15:6.58:0,7,128	0/1:42,0:40:30.65:31,0,295	0/1:5,7:12:31.83:209,0,32	0/1:7,7:16:16.12:192,0,16	0/1:10,10:19:70.88:164,0,71	0/1:17,0:18:16.09:16,0,254	0/1:17,1:19:7.35:7,0,310	0/1:25,0:25:63.76:64,0,173	0/0:8,0:8:7.97:0,8,100
chr10	52001461	.	AGCACCCACATG	A	3511.36	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=9.569;DP=518;FS=1.428;HRun=0;HaplotypeScore=153.1317;InbreedingCoeff=0.9673;MQ=56.83;MQ0=4;MQRankSum=-9.346;QD=65.03;ReadPosRankSum=2.417;VQSLOD=3.6842;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,147,7774	1/1:1,3:4:9.03:274,9,0	0/0:11,0:6:15.03:0,15,328	0/0:16,0:11:27.09:0,27,1242	0/0:26,0:26:72.22:0,72,3727	0/0:25,0:25:69.24:0,69,3788	0/0:20,0:20:57.20:0,57,3130	0/0:32,0:29:78.25:0,78,3732	0/0:19,0:19:57.20:0,57,2978	0/0:23,0:23:66.23:0,66,3670	0/0:15,0:15:42.14:0,42,1983	0/0:18,0:18:54.17:0,54,2749	0/0:20,0:20:60.21:0,60,3302	0/0:13,0:13:39.13:0,39,2025	1/1:1,22:23:51.18:1799,51,0	1/1:3,6:9:15.05:486,15,0	1/1:0,10:10:12.04:423,12,0	1/1:1,7:8:15.05:529,15,0	0/0:16,0:16:45.15:0,45,2387	0/0:20,0:20:60.21:0,60,3180	0/0:32,0:31:90.29:0,90,4799	0/0:14,0:14:42.14:0,42,2386	0/0:10,0:10:30.10:0,30,1435	0/0:19,0:19:57.20:0,57,3179	0/0:17,0:17:51.15:0,51,2752	0/0:18,0:18:51.18:0,51,2773	0/0:17,0:17:48.16:0,48,2620	0/0:12,0:12:36.12:0,36,2016
chr10	52002620	.	G	GTGAC	2513.96	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-6.499;DP=652;FS=11.225;HRun=0;HaplotypeScore=103.7240;InbreedingCoeff=0.9962;MQ=72.72;MQ0=0;MQRankSum=-1.263;QD=62.85;ReadPosRankSum=1.120;VQSLOD=5.1181;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:81.28:0,81,1499	0/0:9,0:9:27.09:0,27,503	0/0:11,0:11:24.08:0,24,397	0/0:13,0:13:24.07:0,24,398	0/0:34,0:34:99:0,99,1810	0/0:26,0:26:75.26:0,75,1398	0/0:13,0:13:39.12:0,39,696	0/0:37,0:37:99:0,99,1722	0/0:23,0:23:66.23:0,66,1230	0/0:25,0:25:75.26:0,75,1366	0/0:24,0:24:72.25:0,72,1342	0/0:34,0:34:96.33:0,96,1791	0/0:24,0:24:72.23:0,72,1312	0/0:29,0:29:78.25:0,78,1413	0/0:30,0:30:84.29:0,84,1555	0/0:26,0:26:75.24:0,75,1368	1/1:0,21:22:60.21:1597,60,0	1/1:2,15:17:39.13:1038,39,0	0/0:29,0:29:81.27:0,81,1442	0/0:31,0:31:87.28:0,87,1569	0/0:19,0:19:54.18:0,54,995	0/0:17,0:17:48.16:0,48,888	0/0:31,0:31:84.29:0,84,1552	0/0:22,0:22:66.17:0,66,1141	0/0:13,0:13:36.12:0,36,672	0/0:27,0:27:75.25:0,75,1357	0/0:26,0:25:78.25:0,78,1398	0/0:8,0:8:24.08:0,24,447
chr10	52013607	.	GTT	G	2127.87	PASS	AB=0.673;AC=14;AF=0.250;AN=56;BaseQRankSum=6.356;DP=665;FS=18.577;HRun=14;HaplotypeScore=120.0366;InbreedingCoeff=0.6291;MQ=70.00;MQ0=5;MQRankSum=0.138;QD=9.09;ReadPosRankSum=-0.948;VQSLOD=0.2534;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:7,2:24:27.37:27,0,177	0/1:0,1:5:15.53:17,0,16	0/1:27,0:12:3.11:3,0,85	0/0:21,0:15:12.51:0,13,174	0/0:35,0:36:53.47:0,53,674	0/0:24,0:27:36.72:0,37,480	0/0:32,0:33:60.74:0,61,574	1/1:13,21:34:65.90:580,66,0	0/0:14,0:15:25.82:0,26,213	0/0:27,0:28:39.46:0,39,415	0/0:20,0:20:43.76:0,44,356	0/0:12,0:12:7.87:0,8,170	0/0:24,0:24:29.01:0,29,451	0/0:23,0:23:45.77:0,46,454	0/0:6,1:27:21.35:0,21,176	0/0:9,1:22:11.84:0,12,220	0/1:13,1:42:17.36:17,0,181	0/0:6,0:11:21.84:0,22,116	1/1:5,11:18:41.53:344,42,0	1/1:7,23:30:59.52:528,60,0	1/1:5,21:28:47.03:407,47,0	0/0:29,0:30:54.13:0,54,515	0/0:19,0:18:46.92:0,47,392	0/0:17,0:17:42.01:0,42,391	0/0:23,0:24:38.33:0,38,346	0/0:24,0:25:26.72:0,27,392	1/1:5,20:25:41.53:388,42,0	0/0:16,0:16:44.90:0,45,397
chr10	52013619	.	T	TG	3695.14	PASS	AB=0.978;AC=34;AF=0.607;AN=56;BaseQRankSum=-3.213;DP=676;FS=77.490;HRun=0;HaplotypeScore=113.3601;InbreedingCoeff=0.5490;MQ=63.18;MQ0=8;MQRankSum=0.862;QD=7.65;ReadPosRankSum=-1.336;VQSLOD=0.6909;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,1:28:38.62:0,39,395	0/0:7,0:7:14.73:0,15,99	0/0:27,0:10:11.15:0,11,152	0/0:18,0:12:20.26:0,20,227	0/1:40,1:41:2.53:231,0,3	1/1:31,0:31:30.90:178,31,0	0/1:31,0:31:35.99:119,0,36	1/1:30,0:30:76.78:523,77,0	1/1:14,0:15:7.82:111,8,0	1/1:31,0:30:11.97:202,12,0	1/1:20,1:21:17.17:138,17,0	1/1:11,0:11:10.82:90,11,0	0/1:21,1:22:19.59:90,0,20	0/1:20,0:20:22.03:22,0,66	0/0:31,0:31:77.04:0,77,548	0/0:27,0:27:62.38:0,62,532	0/0:38,2:40:33.36:0,33,532	0/0:14,0:14:38.11:0,38,253	1/1:19,0:19:52.28:324,52,0	1/1:29,0:28:68.43:351,68,0	1/1:25,0:25:57.21:301,57,0	1/1:30,0:30:8.79:110,9,0	1/1:24,0:23:24.99:150,25,0	0/1:15,0:15:21.20:53,0,21	1/1:21,0:21:20.63:106,21,0	1/1:23,0:23:29.01:195,29,0	1/1:29,0:29:54.15:353,54,0	0/1:14,1:15:7.36:51,0,7
chr10	52014000	.	G	GA	1772.63	PASS	AB=0.933;AC=17;AF=0.304;AN=56;BaseQRankSum=0.343;DP=393;FS=4.755;HRun=2;HaplotypeScore=61.5615;InbreedingCoeff=0.8874;MQ=81.01;MQ0=1;MQRankSum=0.911;QD=12.06;ReadPosRankSum=0.146;VQSLOD=2.0019;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:16,1:17:24.01:237,24,0	1/1:2,6:7:11.92:99,12,0	0/0:24,0:19:17.73:0,18,239	0/0:17,0:11:3.66:0,4,157	0/0:15,0:15:22.19:0,22,230	0/0:15,0:15:26.92:0,27,258	0/0:14,0:14:32.86:0,33,312	1/1:25,0:25:54.37:409,54,0	0/0:11,0:11:20.97:0,21,203	0/0:12,0:12:14.83:0,15,117	0/0:13,0:14:15.57:0,16,198	0/0:11,0:11:23.54:0,24,189	0/0:11,0:11:20.88:0,21,173	0/0:9,0:9:24:0,24,246	1/1:1,12:13:21.07:270,21,0	1/1:2,9:12:18.51:217,19,0	0/0:19,0:19:35.13:0,35,225	0/0:4,0:4:11.79:0,12,78	0/1:13,1:14:1.83:184,0,2	1/1:22,1:22:44.17:352,44,0	1/1:11,0:11:14.32:91,14,0	0/0:19,0:19:32.81:0,33,279	0/0:15,0:15:29.62:0,30,260	0/0:5,0:5:8.96:0,9,91	0/0:10,0:10:18:0,18,165	0/0:14,0:14:29.88:0,30,281	1/1:23,1:24:15.88:115,16,0	0/0:7,0:7:17.93:0,18,173
chr10	52015630	.	ACAAAG	A	969.16	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.303;DP=638;FS=0.000;HRun=0;HaplotypeScore=111.3962;InbreedingCoeff=0.9955;MQ=84.96;MQ0=0;MQRankSum=-1.612;QD=42.14;ReadPosRankSum=1.777;VQSLOD=3.6741;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,22:23:51.18:1064,51,0	0/0:7,0:7:21.07:0,21,650	0/0:23,0:23:63.21:0,63,1785	0/0:26,0:25:64.74:0,65,1742	0/0:31,0:31:87.30:0,87,2677	0/0:33,0:33:84.29:0,84,2503	0/0:21,0:21:63.20:0,63,1847	0/0:37,0:37:99:0,108,3225	0/0:17,0:17:48.15:0,48,1374	0/0:14,0:14:39.12:0,39,1129	0/0:25,0:25:72.25:0,72,2182	0/0:22,0:22:66.23:0,66,2045	0/0:30,0:30:78.27:0,78,2387	0/0:18,0:18:48.16:0,48,1451	0/0:22,0:22:48.15:0,48,1405	0/0:21,0:21:54.19:0,54,1630	0/0:20,0:20:54.18:0,54,1512	0/0:13,0:13:36.09:0,36,1030	0/0:18,0:18:51.17:0,51,1496	0/0:36,0:36:99:0,102,3157	0/0:21,0:21:63.22:0,63,1953	0/0:31,0:31:81.28:0,81,2493	0/0:26,0:26:75.26:0,75,2283	0/0:27,0:27:75.26:0,75,2320	0/0:21,0:21:63.22:0,63,1941	0/0:26,0:26:78.27:0,78,2399	0/0:18,0:18:45.15:0,45,1390	0/0:11,0:11:33.11:0,33,973
chr10	52015997	.	AT	A	233.69	PASS	AB=0.560;AC=3;AF=0.054;AN=56;BaseQRankSum=4.209;DP=536;FS=2.165;HRun=10;HaplotypeScore=55.6993;InbreedingCoeff=0.7004;MQ=77.73;MQ0=0;MQRankSum=-2.591;QD=10.62;ReadPosRankSum=0.637;VQSLOD=2.5430;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:66.14:0,66,710	0/0:10,0:10:27.07:0,27,299	0/0:17,0:16:41.39:0,41,387	0/0:8,0:8:15.03:0,15,155	0/0:31,0:31:75.19:0,75,822	0/0:18,0:19:47.96:0,48,512	0/0:12,0:12:30.07:0,30,324	0/0:33,0:33:81.22:0,81,896	0/0:15,0:15:45.12:0,45,498	0/0:32,0:32:72.19:0,72,790	0/0:17,0:18:50.97:0,51,543	0/0:16,0:16:42.10:0,42,457	0/0:25,0:25:63.17:0,63,695	0/0:15,0:15:42.11:0,42,465	0/0:27,0:27:72.19:0,72,796	0/0:23,0:23:54.15:0,54,597	1/1:2,6:8:17.99:156,18,0	0/1:3,11:14:6.36:181,0,6	0/0:19,0:19:48.09:0,48,512	0/0:32,0:33:87.07:0,87,943	0/0:17,0:17:48.08:0,48,509	0/0:21,0:22:50.95:0,51,530	0/0:14,0:14:36.10:0,36,398	0/0:4,0:4:12.03:0,12,133	0/0:19,0:19:42.11:0,42,465	0/0:22,1:23:43.09:0,43,685	0/0:27,0:27:75.19:0,75,822	0/0:11,0:11:33.07:0,33,355
chr10	52016611	.	CA	C	8404.14	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=12.796;DP=694;FS=1.693;HRun=4;HaplotypeScore=67.5617;InbreedingCoeff=0.9999;MQ=78.68;MQ0=0;MQRankSum=-5.639;QD=30.45;ReadPosRankSum=2.093;VQSLOD=5.3797;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,26:31:42.08:828,42,0	1/1:2,11:13:30.09:360,30,0	0/0:32,0:32:93.27:0,93,1266	0/0:28,0:28:78.13:0,78,1036	0/0:38,0:38:99:0,105,1432	0/0:14,0:14:42.14:0,42,585	0/0:14,0:14:37.33:0,37,484	1/1:0,31:31:93.25:1084,93,0	0/0:15,0:15:39.13:0,39,534	0/0:25,0:25:72.24:0,72,1003	0/0:16,0:16:42.13:0,42,562	0/0:18,0:18:51.17:0,51,713	0/0:22,0:22:60.20:0,60,838	0/0:35,0:35:93.31:0,93,1301	1/1:0,29:29:66.20:792,66,0	1/1:2,20:22:48.15:576,48,0	1/1:3,20:23:57.17:684,57,0	1/1:0,19:19:57.17:684,57,0	1/1:0,15:15:42.10:487,42,0	1/1:1,33:34:90.27:1076,90,0	1/1:1,36:37:99:1260,105,0	0/0:20,0:20:57.19:0,57,798	0/0:34,0:34:84.27:0,84,1160	0/0:26,0:26:66.22:0,66,922	0/0:25,0:25:68.72:0,69,935	0/0:38,0:38:99:0,108,1474	1/1:1,21:22:48.15:574,48,0	0/0:18,0:18:54.16:0,54,734
chr10	52022843	.	AAAAG	A	1004.02	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=3.123;DP=346;FS=1.984;HRun=0;HaplotypeScore=58.9233;InbreedingCoeff=0.8279;MQ=67.07;MQ0=11;MQRankSum=-2.042;QD=17.31;ReadPosRankSum=4.191;VQSLOD=3.0294;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:3.90:0,4,8	1/1:0,6:6:9.03:140,9,0	0/0:12,0:10:4.10:0,4,136	0/0:9,0:7:0.77:0,1,104	0/0:23,0:21:39.01:0,39,701	0/0:7,0:7:15.01:0,15,291	0/0:7,0:7:17.99:0,18,282	0/0:28,0:27:57.55:0,58,706	0/0:15,0:15:26.96:0,27,416	0/0:13,0:13:33.05:0,33,603	0/0:9,0:9:27.08:0,27,564	0/0:9,0:9:18.47:0,18,313	0/0:10,0:10:27.01:0,27,458	0/0:12,0:11:26.75:0,27,215	1/1:7,9:15:20.88:326,21,0	1/1:2,8:10:15.01:234,15,0	1/1:4,10:12:14.99:234,15,0	1/1:3,9:12:14.99:234,15,0	0/0:8,0:8:20.98:0,21,223	0/0:10,0:9:15.05:0,15,296	0/0:9,0:9:9.03:0,9,179	0/0:8,0:8:18.05:0,18,367	0/0:21,0:21:47.91:0,48,774	0/0:8,0:6:15:0,15,258	0/0:8,0:8:11.99:0,12,234	0/0:18,0:18:36.53:0,37,600	0/0:14,0:14:16.72:0,17,224	0/0:15,0:13:33.06:0,33,549
chr10	52022845	.	AAG	A	492.89	PASS	AB=1.000;AC=14;AF=0.250;AN=56;BaseQRankSum=5.558;DP=331;FS=4.142;HRun=0;HaplotypeScore=48.0240;InbreedingCoeff=0.7630;MQ=68.89;MQ0=6;MQRankSum=-3.733;QD=4.74;ReadPosRankSum=1.757;VQSLOD=1.3739;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,15:15:9.91:114,10,0	1/1:6,0:6:8.95:65,9,0	0/0:12,0:10:18.03:0,18,122	0/0:9,0:7:9.08:0,9,83	0/0:23,0:22:35.73:0,36,443	0/0:6,0:6:11.94:0,12,164	0/0:7,0:7:14.96:0,15,186	0/1:27,0:27:2.66:3,0,385	0/0:15,0:15:20.78:0,21,252	0/0:12,0:12:29.97:0,30,399	0/0:10,0:10:29.97:0,30,383	0/0:10,0:10:17.35:0,17,206	0/0:11,0:11:26.86:0,27,307	0/0:12,0:11:20.46:0,20,145	1/1:13,0:12:20.88:152,21,0	1/1:8,0:8:14.91:108,15,0	1/1:12,0:12:14.91:109,15,0	1/1:9,0:9:14.91:109,15,0	0/0:8,0:8:17.81:0,18,152	0/0:10,0:9:15.03:0,15,155	0/0:8,0:8:12.02:0,12,121	0/0:8,0:8:18.04:0,18,234	0/0:19,0:19:44.59:0,45,493	0/0:7,0:6:11.95:0,12,145	0/0:8,0:8:8.92:0,9,137	0/0:16,1:17:32.30:0,32,352	0/1:14,0:14:14.12:14,0,114	0/0:15,0:13:29.42:0,29,317
chr10	52023202	.	CATTTAAAGAAA	C	1159.26	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.182;DP=266;FS=1.271;HRun=0;HaplotypeScore=86.6755;InbreedingCoeff=0.7794;MQ=68.56;MQ0=0;MQRankSum=-5.595;QD=77.28;ReadPosRankSum=0.484;VQSLOD=3.5270;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,14:15:39.09:1254,39,0	0/0:7,0:7:21.07:0,21,1169	0/0:5,0:5:15.02:0,15,495	0/0:7,0:7:21.07:0,21,404	0/0:13,0:13:36.11:0,36,1677	0/0:10,0:10:30.09:0,30,1584	0/0:8,0:8:24.08:0,24,1343	0/0:17,0:17:42.13:0,42,2075	0/0:9,0:9:24.07:0,24,1079	0/0:10,0:10:30.10:0,30,1627	0/0:4,0:4:12.04:0,12,624	0/0:7,0:7:21.07:0,21,1082	0/0:7,0:7:21.07:0,21,1041	0/0:6,0:6:18.06:0,18,1047	0/0:13,0:13:33.11:0,33,1756	0/0:11,0:11:33.11:0,33,1585	0/0:8,0:8:24.08:0,24,1319	0/0:8,0:8:24.08:0,24,1294	0/0:14,0:14:42.14:0,42,1946	0/0:9,0:9:24.08:0,24,1205	0/0:20,0:20:60.19:0,60,2950	0/0:10,0:10:30.10:0,30,1648	0/0:13,0:13:39.13:0,39,2011	0/0:7,0:7:21.07:0,21,1071	0/0:5,0:5:15.01:0,15,664	0/0:12,0:12:36.12:0,36,1714	0/0:9,0:9:27.09:0,27,1394	0/0:2,0:2:3.01:0,3,175
chr10	52023256	.	AGGGGGG	A	1433.85	PASS	AB=0.667;AC=17;AF=0.315;AN=54;BaseQRankSum=-0.877;DP=177;FS=0.899;HRun=15;HaplotypeScore=48.4948;InbreedingCoeff=0.5066;MQ=98.24;MQ0=3;MQRankSum=-5.021;QD=23.13;ReadPosRankSum=4.201;VQSLOD=-0.3377;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,6:12:14.91:239,15,0	1/1:1,5:6:12.02:222,12,0	0/0:26,0:15:22.50:0,23,322	0/0:20,0:15:19.49:0,19,390	1/1:1,0:1:1.25:3,1,0	./.	0/0:4,0:4:6.02:0,6,154	0/0:12,0:12:9.01:0,9,108	0/0:7,0:7:12.04:0,12,345	0/0:2,0:2:3.01:0,3,72	0/0:4,0:4:6.02:0,6,144	0/0:2,0:2:0:0,0,0	0/0:0,0:1:1.82:0,2,5	0/0:2,0:2:3.01:0,3,83	1/1:2,10:12:24.05:445,24,0	1/1:1,10:11:27.09:501,27,0	1/1:1,2:3:6.01:111,6,0	1/1:2,2:4:2.97:56,3,0	0/0:3,0:4:1.82:0,2,5	0/0:5,0:5:3.01:0,3,51	1/1:7,0:7:0.77:2,1,0	0/0:8,0:8:6:0,6,56	0/1:3,0:6:7.41:7,0,23	0/0:0,0:2:3.63:0,4,10	0/0:2,0:2:0:0,0,0	0/0:2,0:2:3.01:0,3,85	0/0:10,0:9:10.42:0,10,70	0/0:1,0:1:3.01:0,3,91
chr10	52023268	.	GGGGA	G	192.99	PASS	AB=0.974;AC=15;AF=0.278;AN=54;BaseQRankSum=7.871;DP=195;FS=20.967;HRun=0;HaplotypeScore=45.8409;InbreedingCoeff=-0.0754;MQ=95.40;MQ0=2;MQRankSum=-7.995;QD=1.75;ReadPosRankSum=7.354;VQSLOD=-0.3145;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:9,0:9:26.13:29,0,26	0/1:7,0:7:21.53:22,0,33	0/1:21,0:11:2.60:3,0,145	0/0:23,0:17:26.36:0,26,323	0/0:4,0:4:5.05:0,5,46	./.	0/0:2,0:2:6.01:0,6,96	0/0:14,0:14:21.02:0,21,194	0/0:5,0:5:15.04:0,15,250	0/0:3,0:3:9.02:0,9,105	0/0:3,0:3:9.02:0,9,121	0/0:4,0:4:11.98:0,12,109	0/1:7,0:7:3.82:4,0,96	0/0:4,0:4:9:0,9,106	1/1:11,0:11:0.31:62,0,0	1/1:10,0:10:23.83:101,24,0	0/1:5,0:5:6.79:7,0,49	0/1:3,0:3:3.50:3,0,13	0/1:5,0:5:5.02:5,0,82	0/0:3,1:4:3:0,3,25	0/0:11,0:11:26.15:0,26,250	0/1:7,1:8:3.76:4,0,99	0/1:10,1:11:21.65:22,0,116	0/1:3,0:3:14.83:39,0,15	0/0:2,0:2:6:0,6,50	0/0:3,0:3:9.02:0,9,114	0/1:9,1:9:34.32:34,0,122	0/0:2,0:2:6:0,6,63
chr10	52023700	.	C	CA	3744.53	PASS	AB=0.889;AC=51;AF=0.911;AN=56;BaseQRankSum=2.012;DP=572;FS=4.272;HRun=3;HaplotypeScore=301.8204;InbreedingCoeff=0.6074;MQ=60.36;MQ0=1;MQRankSum=-2.729;QD=6.97;ReadPosRankSum=-2.845;VQSLOD=-0.6902;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:12,1:13:22.82:138,23,0	1/1:14,0:14:23.76:134,24,0	0/0:19,0:17:26.91:0,27,305	0/0:16,0:11:15.67:0,16,140	1/1:35,0:35:36.74:203,37,0	1/1:27,0:27:22.39:95,22,0	1/1:14,2:16:25.23:150,25,0	1/1:21,0:21:38.06:196,38,0	1/1:29,1:30:34.75:182,35,0	1/1:29,1:30:58.34:304,58,0	1/1:25,0:25:27.86:166,28,0	1/1:14,0:14:11.21:37,11,0	1/1:22,1:23:12.88:100,13,0	1/1:14,0:14:16.73:133,17,0	1/1:18,1:19:23.59:135,24,0	1/1:23,1:24:30.23:154,30,0	1/1:8,0:8:7.22:36,7,0	1/1:5,0:5:8.72:33,9,0	1/1:12,0:12:23.54:107,24,0	1/1:39,2:41:65.10:396,65,0	1/1:6,0:6:2.90:16,3,0	1/1:24,1:25:34.69:201,35,0	1/1:36,0:36:45.65:210,46,0	1/1:10,1:11:1.20:32,1,0	1/1:19,0:19:24.53:159,25,0	1/1:25,1:26:46:211,46,0	1/1:34,1:35:39.22:165,39,0	0/1:7,1:8:9.27:55,0,9
chr10	52023720	.	AG	A	15335.04	PASS	AB=0.864;AC=53;AF=0.946;AN=56;BaseQRankSum=4.754;DP=570;FS=1.676;HRun=3;HaplotypeScore=306.6412;InbreedingCoeff=0.4351;MQ=47.96;MQ0=2;MQRankSum=-3.996;QD=27.58;ReadPosRankSum=5.049;VQSLOD=3.2559;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,18:18:45.13:515,45,0	1/1:0,10:10:30.09:340,30,0	0/1:16,3:12:15.99:94,0,16	0/0:12,2:8:3.10:0,3,62	1/1:4,30:34:89.05:969,89,0	1/1:2,23:25:61.42:667,61,0	1/1:2,14:16:42.83:446,43,0	1/1:8,15:22:39.01:403,39,0	1/1:1,28:29:87.21:969,87,0	1/1:2,26:28:81.18:890,81,0	1/1:4,21:26:62.99:718,63,0	1/1:1,11:12:33.98:375,34,0	1/1:12,12:24:42.47:445,42,0	1/1:0,14:14:42.08:460,42,0	1/1:2,17:19:53.04:586,53,0	1/1:1,18:19:51.15:581,51,0	1/1:3,5:8:13.84:149,14,0	1/1:1,4:5:9.03:103,9,0	1/1:6,7:13:17.50:190,17,0	1/1:2,38:40:99:1239,109,0	1/1:0,5:5:12.04:139,12,0	1/1:5,20:25:63.17:704,63,0	1/1:4,30:34:95.66:1051,96,0	1/1:1,9:10:18.02:190,18,0	1/1:1,18:19:57.12:636,57,0	1/1:0,27:27:81.18:896,81,0	1/1:3,36:39:99:1170,110,0	1/1:3,12:15:38.99:409,39,0
chr10	52023724	.	AG	A	15426	PASS	AB=0.944;AC=53;AF=0.946;AN=56;BaseQRankSum=-0.634;DP=574;FS=3.109;HRun=3;HaplotypeScore=321.6705;InbreedingCoeff=0.4780;MQ=46.97;MQ0=2;MQRankSum=-1.188;QD=27.60;ReadPosRankSum=4.731;VQSLOD=3.2851;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:18:48.09:522,48,0	1/1:11,0:11:33.05:360,33,0	0/1:16,1:9:57.17:57,0,71	0/0:14,0:9:5.18:0,5,79	1/1:32,0:32:90.10:973,90,0	1/1:26,0:25:66.53:718,67,0	1/1:15,0:15:41.94:436,42,0	1/1:23,0:22:39.02:402,39,0	1/1:29,0:29:87.23:979,87,0	1/1:30,0:30:82.35:909,82,0	1/1:25,0:25:66.14:730,66,0	1/1:12,0:12:33.09:375,33,0	1/1:16,10:26:45.56:489,46,0	1/1:15,0:15:43.34:470,43,0	1/1:20,0:20:51.99:563,52,0	1/1:21,0:21:48.90:567,49,0	1/1:8,0:8:14.94:156,15,0	1/1:5,0:5:9.03:101,9,0	1/1:11,0:11:18.02:192,18,0	1/1:42,0:42:99:1279,117,0	1/1:5,0:5:12.03:132,12,0	1/1:21,0:21:60.17:678,60,0	1/1:32,0:32:92.07:1016,92,0	1/1:9,0:9:13.26:168,13,0	1/1:21,0:21:56.89:629,57,0	1/1:30,0:30:81.19:914,81,0	1/1:40,0:40:99:1197,109,0	1/1:15,0:15:38.96:411,39,0
chr10	52023759	.	AC	A	16628.85	PASS	AB=0.813;AC=54;AF=0.964;AN=56;BaseQRankSum=0.556;DP=576;FS=13.146;HRun=2;HaplotypeScore=376.6501;InbreedingCoeff=-0.0394;MQ=49.94;MQ0=0;MQRankSum=-2.915;QD=28.87;ReadPosRankSum=1.619;VQSLOD=0.2330;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,20:20:42.12:490,42,0	1/1:1,15:16:45.13:525,45,0	0/1:7,3:9:21.57:188,0,22	0/1:10,1:10:16.67:80,0,17	1/1:6,23:29:66.20:769,66,0	1/1:4,11:15:30.09:350,30,0	1/1:2,16:18:42.12:490,42,0	1/1:6,23:29:69.20:805,69,0	1/1:3,24:27:69.20:802,69,0	1/1:4,34:38:99:1224,105,0	1/1:1,21:22:54.16:629,54,0	1/1:0,12:12:36.11:420,36,0	1/1:0,19:19:57.17:664,57,0	1/1:2,15:17:45.13:524,45,0	1/1:4,18:22:54.16:629,54,0	1/1:1,25:26:66.20:769,66,0	1/1:0,12:12:30.09:350,30,0	1/1:0,6:6:15.04:175,15,0	1/1:3,17:20:45.13:524,45,0	1/1:4,37:41:99:1224,105,0	1/1:0,4:4:9.03:105,9,0	1/1:1,19:20:57.17:664,57,0	1/1:4,23:27:57.17:664,57,0	1/1:1,9:10:21.06:245,21,0	1/1:1,18:19:54.16:629,54,0	1/1:5,30:35:90.27:1049,90,0	1/1:3,32:35:96.29:1119,96,0	1/1:0,15:15:45.13:525,45,0
chr10	52024347	.	A	AAAAC	7519.60	PASS	AB=0.698;AC=19;AF=0.339;AN=56;BaseQRankSum=-7.568;DP=684;FS=0.408;HRun=0;HaplotypeScore=114.6264;InbreedingCoeff=0.8755;MQ=70.05;MQ0=2;MQRankSum=1.793;QD=27.95;ReadPosRankSum=0.586;VQSLOD=4.8229;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:47.71:0,48,729	0/0:4,0:4:9.03:0,9,142	0/0:28,0:24:6.01:0,6,83	0/0:23,0:19:6.02:0,6,91	0/0:27,0:27:54.15:0,54,800	0/0:29,0:29:63.21:0,63,990	0/0:22,0:22:48.16:0,48,753	1/1:25,7:36:21.23:498,21,0	0/0:21,0:21:48.16:0,48,756	0/0:23,0:23:42.14:0,42,643	0/0:27,0:27:48.15:0,48,731	1/1:4,14:18:36.12:856,36,0	1/1:10,11:23:27.09:637,27,0	0/0:31,0:31:66.21:0,66,994	0/0:23,0:23:24.08:0,24,378	0/0:22,0:22:39.12:0,39,588	0/0:24,0:24:40.26:0,40,522	0/0:21,0:20:16.52:0,17,470	1/1:10,6:17:27.02:513,27,0	0/1:25,18:44:37.45:1053,0,37	1/1:6,21:28:42.14:998,42,0	1/1:15,0:29:33.11:574,33,0	1/1:7,12:18:36.12:855,36,0	1/1:16,1:17:15.02:259,15,0	0/0:21,0:21:48.12:0,48,729	0/0:29,0:29:60.19:0,60,890	1/1:14,21:35:54.19:1278,54,0	0/0:14,0:14:27.03:0,27,353
chr10	52025512	.	TAATGG	T	6445.96	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=13.761;DP=645;FS=0.825;HRun=0;HaplotypeScore=116.9466;InbreedingCoeff=0.9755;MQ=58.85;MQ0=7;MQRankSum=-5.112;QD=48.47;ReadPosRankSum=-1.201;VQSLOD=4.7524;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,111,3393	0/0:2,0:2:6.02:0,6,188	0/0:22,0:8:24.08:0,24,738	0/0:27,0:18:48.13:0,48,1283	0/0:32,0:32:81.03:0,81,2451	0/0:21,0:21:63.20:0,63,1904	0/0:21,0:21:63.20:0,63,1810	1/1:2,28:29:78.21:1516,78,0	0/0:25,0:25:75.26:0,75,2333	0/0:23,0:23:66.23:0,66,2068	0/0:23,0:23:66.23:0,66,2025	0/0:23,0:23:69.24:0,69,2118	0/0:17,0:17:51.18:0,51,1555	0/0:20,0:20:57.20:0,57,1758	0/0:23,0:23:66.18:0,66,1993	0/0:24,0:24:69.22:0,69,2004	0/0:25,0:25:72.25:0,72,2255	0/0:19,0:19:54.16:0,54,1466	1/1:3,17:20:48.15:965,48,0	1/1:0,28:28:78.27:1635,78,0	1/1:0,28:27:62.77:1314,63,0	0/0:17,0:17:51.18:0,51,1580	0/0:19,0:19:57.20:0,57,1685	0/0:12,0:12:36.12:0,36,1125	0/0:25,0:25:75.25:0,75,2282	0/0:23,0:23:66.23:0,66,1985	1/1:6,21:26:48.16:1016,48,0	0/0:27,0:26:72.25:0,72,2147
chr10	52026149	.	A	AAT	7649.70	PASS	AB=0.685;AC=20;AF=0.357;AN=56;BaseQRankSum=-1.980;DP=554;FS=4.543;HRun=0;HaplotypeScore=87.1728;InbreedingCoeff=0.7999;MQ=61.21;MQ0=7;MQRankSum=-3.447;QD=33.55;ReadPosRankSum=-0.080;VQSLOD=7.0620;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,14:20:45.15:738,45,0	1/1:8,2:10:21.07:344,21,0	0/0:12,0:9:14.91:0,15,161	0/0:15,0:9:12.04:0,12,149	0/0:27,0:27:63.20:0,63,802	0/0:15,0:15:30.10:0,30,381	0/0:8,0:8:21.05:0,21,254	1/1:18,19:36:90.23:1401,90,0	0/0:15,0:15:33.08:0,33,406	0/0:31,0:31:78.24:0,78,982	0/0:20,0:20:51.12:0,51,618	0/0:21,0:21:45.13:0,45,559	0/0:19,0:19:24.07:0,24,293	0/0:27,0:27:63.02:0,63,802	1/1:3,22:25:66.22:1084,66,0	1/1:4,9:14:30.10:484,30,0	1/1:3,13:15:0.94:561,1,0	0/1:3,6:9:16.99:285,0,17	0/1:7,3:10:20.15:209,0,20	1/1:10,25:34:48.16:770,48,0	1/1:7,15:19:33.11:552,33,0	0/0:11,0:11:21.07:0,21,267	0/0:15,0:16:26.90:0,27,305	0/0:13,0:11:18.01:0,18,211	0/0:26,0:26:57.17:0,57,715	0/0:37,0:37:96.30:0,96,1212	1/1:9,21:29:78.25:1223,78,0	0/0:13,0:13:39.12:0,39,496
chr10	52026180	.	C	CCA	1533.52	PASS	AB=0.538;AC=9;AF=0.161;AN=56;BaseQRankSum=-6.334;DP=524;FS=5.247;HRun=0;HaplotypeScore=107.4150;InbreedingCoeff=0.7487;MQ=53.43;MQ0=13;MQRankSum=3.417;QD=19.92;ReadPosRankSum=2.043;VQSLOD=4.0498;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:11:5.87:0,6,35	0/0:5,0:5:8.88:0,9,64	0/0:22,0:4:6.01:0,6,57	0/0:23,0:6:2.90:0,3,69	0/0:28,0:28:57.18:0,57,705	0/0:13,0:12:39.09:0,39,457	0/0:10,0:10:21.04:0,21,234	0/0:39,0:37:74.92:0,75,669	0/0:18,0:18:38.87:0,39,444	0/0:34,0:33:78.21:0,78,917	0/0:22,0:22:48.15:0,48,594	1/1:1,14:15:30.10:492,30,0	0/1:3,17:21:10.10:343,0,10	0/0:29,0:29:71.99:0,72,842	0/0:21,0:20:44.49:0,44,334	0/0:11,0:11:26.85:0,27,223	0/0:12,0:12:18:0,18,164	0/0:8,0:8:11.91:0,12,91	0/0:6,0:4:9.01:0,9,87	0/0:21,0:19:14.80:0,15,111	0/0:14,0:14:14.50:0,15,117	1/1:2,8:10:15.03:246,15,0	1/1:2,10:13:18.04:269,18,0	1/1:3,14:16:21.07:344,21,0	0/0:19,0:19:51.09:0,51,590	0/0:32,0:32:75.21:0,75,906	0/0:28,0:27:59.75:0,60,509	0/0:19,0:19:49.04:0,49,589
chr10	52026203	.	TATAC	T	3613.44	PASS	AB=0.714;AC=21;AF=0.375;AN=56;BaseQRankSum=10.595;DP=461;FS=6.049;HRun=0;HaplotypeScore=105.6598;InbreedingCoeff=0.8479;MQ=54.43;MQ0=10;MQRankSum=-10.458;QD=30.88;ReadPosRankSum=-5.853;VQSLOD=1.4161;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:1,5:7:8.99:108,9,0	1/1:1,3:4:11.95:136,12,0	0/0:21,0:4:6.02:0,6,127	0/0:21,0:7:7.55:0,8,156	0/0:30,0:30:81.24:0,81,2026	0/0:18,0:17:54.13:0,54,1314	0/0:8,0:8:17.97:0,18,443	1/1:5,21:25:63.16:1032,63,0	0/0:14,0:14:42.10:0,42,1085	0/0:34,0:34:93.32:0,93,2535	0/0:21,0:21:60.17:0,60,1499	0/0:16,0:16:39.10:0,39,892	0/0:24,0:24:45.14:0,45,1056	0/0:28,0:28:72.23:0,72,1885	1/1:1,13:13:32.95:446,33,0	1/1:1,7:8:24:375,24,0	1/1:3,2:5:9.03:177,9,0	0/1:3,2:5:6.72:152,0,7	1/1:2,3:5:15.03:224,15,0	1/1:1,13:12:2.97:20,3,0	1/1:2,4:5:8.93:90,9,0	0/0:6,0:6:14.99:0,15,397	0/0:12,0:12:30.07:0,30,657	0/0:17,0:15:26.98:0,27,693	0/0:23,0:23:63.19:0,63,1558	0/0:31,0:31:93.29:0,93,2282	1/1:1,22:23:48.16:853,48,0	0/0:20,0:20:54.18:0,54,1404
chr10	52026289	.	TATAC	T	1525.57	PASS	AB=1.000;AC=20;AF=0.357;AN=56;BaseQRankSum=12.626;DP=453;FS=32.329;HRun=0;HaplotypeScore=95.4926;InbreedingCoeff=0.8033;MQ=63.21;MQ0=1;MQRankSum=-1.282;QD=13.27;ReadPosRankSum=0.149;VQSLOD=1.4093;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:13:14.68:90,15,0	1/1:3,0:3:8.87:57,9,0	0/0:17,0:5:0.86:0,1,67	0/0:12,0:7:10.20:0,10,99	0/0:25,0:25:69.14:0,69,1681	0/0:18,0:17:48.16:0,48,1260	0/0:10,0:10:26.04:0,26,482	1/1:8,12:19:50.29:480,50,0	0/0:10,0:10:27.09:0,27,715	0/0:29,0:29:81.25:0,81,2059	0/0:27,0:27:81.20:0,81,1891	0/0:14,0:14:42.13:0,42,1092	0/0:24,0:24:69.24:0,69,1831	0/0:21,0:21:63.18:0,63,1586	1/1:12,0:12:22.86:146,23,0	1/1:10,1:11:26.54:169,27,0	0/1:7,0:6:19.75:80,0,20	0/1:12,0:12:5.50:91,0,6	1/1:7,0:6:17.87:132,18,0	1/1:9,1:10:14.71:91,15,0	1/1:11,0:10:14.71:91,15,0	0/0:11,0:11:33.11:0,33,900	0/0:15,0:15:39.10:0,39,922	0/0:15,0:15:36.02:0,36,779	0/0:28,0:28:78.24:0,78,1866	0/0:37,0:37:99:0,111,2721	1/1:9,0:9:21.02:307,21,0	0/0:25,0:25:44.61:0,45,1653
chr10	52026291	.	TAC	T	2865.73	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=12.734;DP=455;FS=29.328;HRun=0;HaplotypeScore=75.2775;InbreedingCoeff=0.8970;MQ=63.24;MQ0=1;MQRankSum=-3.254;QD=21.39;ReadPosRankSum=1.043;VQSLOD=1.4573;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,11:13:15.05:210,15,0	1/1:0,3:3:9.03:132,9,0	0/1:18,0:5:16.07:16,0,61	0/0:12,0:7:11.82:0,12,58	0/0:22,0:22:51.84:0,52,1072	0/0:18,0:17:48.15:0,48,813	0/0:9,0:9:24:0,24,340	1/1:14,6:19:51.09:602,51,0	0/0:11,0:11:30.07:0,30,480	0/0:28,0:28:78.24:0,78,1358	0/0:29,0:29:84.18:0,84,1302	0/0:15,0:15:45.12:0,45,756	0/0:24,0:24:66.23:0,66,1166	0/0:21,0:21:63.17:0,63,1063	1/1:1,11:12:27.09:385,27,0	1/1:1,10:11:27.09:387,27,0	1/1:0,7:6:9.03:124,9,0	1/1:3,9:12:21.04:285,21,0	1/1:0,6:6:18.05:247,18,0	1/1:1,9:10:15.05:220,15,0	1/1:0,11:10:15.05:220,15,0	0/0:11,0:11:33.11:0,33,601	0/0:15,0:15:42.08:0,42,648	0/0:15,0:15:22.67:0,23,511	0/0:29,0:29:75.19:0,75,1194	0/0:37,0:37:99:0,110,1816	1/1:10,1:11:27:258,27,0	0/0:25,0:25:71.30:0,71,1155
chr10	52027746	.	GCA	G	4584.85	PASS	AB=0.784;AC=23;AF=0.411;AN=56;BaseQRankSum=12.921;DP=490;FS=0.391;HRun=0;HaplotypeScore=85.3295;InbreedingCoeff=0.8020;MQ=66.55;MQ0=3;MQRankSum=-1.376;QD=21.53;ReadPosRankSum=1.324;VQSLOD=5.1588;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,14:21:24.91:420,25,0	1/1:0,6:6:9.03:112,9,0	0/0:37,0:27:45.58:0,46,696	0/0:34,0:28:18.89:0,19,549	0/0:14,0:14:36.05:0,36,559	0/0:14,0:14:36.12:0,36,590	0/0:10,0:10:27.09:0,27,427	1/1:2,26:29:75.07:906,75,0	0/0:16,0:16:48.16:0,48,782	0/0:21,0:21:56.55:0,57,932	0/0:31,0:31:84.17:0,84,1311	0/0:15,0:15:42.14:0,42,684	0/1:13,1:14:1.08:1,0,505	0/0:19,0:19:51.17:0,51,834	1/1:0,10:10:27.08:335,27,0	1/1:2,8:11:20.87:237,21,0	1/1:8,16:24:33.01:506,33,0	0/1:4,14:18:2.28:472,0,2	1/1:5,8:13:24.03:280,24,0	1/1:4,14:20:38.78:434,39,0	1/1:3,10:13:18.06:223,18,0	0/0:9,0:9:21.07:0,21,344	0/1:10,2:12:38.28:38,0,451	0/0:17,0:17:33.11:0,33,534	0/0:11,0:11:10.19:0,10,423	0/0:14,1:15:4.93:0,5,603	1/1:4,18:22:51.15:620,51,0	0/0:13,0:13:33.11:0,33,541
chr10	52028841	.	TA	T	6549.42	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=14.477;DP=681;FS=2.084;HRun=10;HaplotypeScore=64.2402;InbreedingCoeff=0.9985;MQ=73.61;MQ0=1;MQRankSum=-5.365;QD=23.06;ReadPosRankSum=0.736;VQSLOD=5.7384;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,33:34:76.33:811,76,0	1/1:0,12:12:35.99:313,36,0	0/0:14,0:14:22.30:0,22,233	0/0:12,0:11:21.58:0,22,184	0/0:34,0:34:84.23:0,84,929	0/0:22,0:21:60.15:0,60,657	0/0:22,0:22:57.15:0,57,631	1/1:6,27:33:80.91:688,81,0	0/0:23,1:24:40.12:0,40,669	0/0:33,0:33:49.11:0,49,737	0/0:22,0:22:63.17:0,63,693	0/0:23,0:23:54.13:0,54,588	0/0:31,0:31:87.24:0,87,962	0/0:17,1:18:24.66:0,25,475	1/1:5,18:23:33.29:422,33,0	1/1:1,24:25:68.98:599,69,0	1/1:2,23:25:62.98:547,63,0	1/1:2,29:31:83.98:728,84,0	1/1:3,21:23:62.96:541,63,0	1/1:1,38:39:99:989,114,0	1/1:0,9:9:26.99:234,27,0	0/0:27,0:27:66.14:0,66,717	0/0:23,0:23:57.15:0,57,630	0/0:20,0:20:54.15:0,54,597	0/0:27,0:27:72.19:0,72,789	0/0:34,0:34:81.67:0,82,882	1/1:1,28:29:77.97:677,78,0	0/0:11,0:11:30.54:0,31,323
chr10	52030055	.	TGTGC	T	3588.42	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=9.906;DP=488;FS=8.292;HRun=0;HaplotypeScore=85.8440;InbreedingCoeff=0.9410;MQ=70.90;MQ0=3;MQRankSum=1.882;QD=18.31;ReadPosRankSum=2.085;VQSLOD=2.4291;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:9,9:18:18.06:291,18,0	1/1:1,6:7:12.04:194,12,0	0/0:18,0:18:6.02:0,6,98	0/0:21,0:16:9.01:0,9,125	0/0:9,0:9:20.87:0,21,348	0/0:13,0:13:30.10:0,30,612	0/0:19,0:19:33.10:0,33,688	1/1:14,9:23:24.02:293,24,0	0/0:17,0:17:42.11:0,42,847	0/0:22,0:21:39.08:0,39,745	0/0:14,0:14:24.08:0,24,484	0/0:18,0:18:45.15:0,45,1060	0/0:12,0:12:24.08:0,24,532	0/0:24,0:24:48.12:0,48,1042	1/1:2,8:10:12.04:194,12,0	1/1:2,8:10:12.04:178,12,0	1/1:4,25:29:39.13:630,39,0	1/1:6,22:28:33.11:533,33,0	1/1:12,14:25:42.01:551,42,0	1/1:3,10:13:24.08:386,24,0	1/1:7,17:24:12.04:194,12,0	0/0:9,0:9:12.04:0,12,261	0/0:13,0:13:33.05:0,33,594	0/0:28,0:28:63.15:0,63,1249	0/0:21,0:21:42.12:0,42,869	0/0:21,0:21:45.14:0,45,962	1/1:1,7:8:9.03:145,9,0	0/0:11,0:11:15.05:0,15,338
chr10	52030552	.	A	ATGG	7013.37	PASS	AB=0.529;AC=21;AF=0.375;AN=56;BaseQRankSum=15.839;DP=605;FS=0.358;HRun=0;HaplotypeScore=146.4492;InbreedingCoeff=0.9092;MQ=90.29;MQ0=0;MQRankSum=-15.590;QD=48.04;ReadPosRankSum=2.550;VQSLOD=6.8103;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,4:6:12.04:203,12,0	0/1:1,8:9:28.85:429,0,29	0/0:26,0:26:72.21:0,72,1257	0/0:26,0:26:69.14:0,69,1188	0/0:26,0:26:78.27:0,78,1454	0/0:19,0:19:57.20:0,57,1063	0/0:12,0:12:36.11:0,36,627	1/1:2,7:12:24.89:484,25,0	0/0:33,0:33:99:0,99,1812	0/0:42,0:42:99:0,123,2237	0/0:31,0:31:93.30:0,93,1687	0/0:25,0:25:75.24:0,75,1359	0/0:44,0:44:99:0,132,2394	0/0:26,0:26:75.26:0,75,1398	1/1:1,23:25:73.49:1373,73,0	1/1:2,18:21:63.08:1089,63,0	1/1:2,7:9:27:412,27,0	1/1:0,4:6:15.05:290,15,0	1/1:0,2:4:12.01:190,12,0	1/1:2,16:22:56.52:1033,57,0	1/1:1,5:7:14.40:240,14,0	0/0:25,0:25:75.26:0,75,1388	0/0:26,0:26:75.26:0,75,1396	0/0:19,0:19:57.15:0,57,1027	0/0:31,0:31:93.32:0,93,1734	0/0:32,0:32:96.33:0,96,1790	1/1:2,22:25:69.68:1271,70,0	0/0:16,0:16:48.16:0,48,895
chr10	52030553	.	C	CTCCTGACAGG	22346.22	PASS	AB=0.619;AC=21;AF=0.375;AN=56;BaseQRankSum=15.725;DP=660;FS=3.804;HRun=0;HaplotypeScore=215.0249;InbreedingCoeff=0.9219;MQ=88.00;MQ0=0;MQRankSum=-18.161;QD=112.86;ReadPosRankSum=1.524;VQSLOD=5.2826;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:9,4:13:27.09:1187,27,0	0/1:5,8:13:65.77:1422,0,66	0/0:27,0:27:72.15:0,72,1936	0/0:27,0:27:72.09:0,72,1967	0/0:26,0:26:78.27:0,78,2648	0/0:19,0:19:57.20:0,57,1935	0/0:12,0:12:30.09:0,30,926	1/1:8,7:15:42.14:1771,42,0	0/0:33,0:33:96.33:0,96,3096	0/0:43,0:43:99:0,123,3928	0/0:30,0:30:90.30:0,90,2775	0/0:24,0:24:72.25:0,72,2377	0/0:44,0:44:99:0,132,4123	0/0:27,0:27:78.25:0,78,2552	1/1:6,23:29:79.15:3695,79,0	1/1:8,18:26:72.25:3406,72,0	1/1:3,7:10:30.10:1154,30,0	1/1:6,4:10:24.08:1123,24,0	1/1:8,2:10:18.06:696,18,0	1/1:12,16:28:60.21:2655,60,0	1/1:8,5:13:30.06:1192,30,0	0/0:25,0:25:72.25:0,72,2395	0/0:26,0:26:75.22:0,75,2347	0/0:19,0:19:57.20:0,57,1876	0/0:32,0:32:93.32:0,93,3082	0/0:32,0:32:96.33:0,96,3222	1/1:9,19:31:90.27:4046,90,0	0/0:16,0:16:48.16:0,48,1596
chr10	52033995	.	A	AT	883.48	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-6.376;DP=663;FS=8.749;HRun=7;HaplotypeScore=62.8563;InbreedingCoeff=0.9982;MQ=72.74;MQ0=1;MQRankSum=-3.614;QD=29.45;ReadPosRankSum=0.605;VQSLOD=3.9882;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,30:30:81.25:978,81,0	0/0:17,0:17:45.07:0,45,435	0/0:24,0:22:46.88:0,47,431	0/0:19,0:17:25.16:0,25,260	0/0:39,0:39:99:0,108,1037	0/0:26,0:26:69.08:0,69,657	0/0:15,0:15:42.01:0,42,387	0/0:17,0:17:39.05:0,39,373	0/0:27,0:27:66.07:0,66,632	0/0:28,0:28:78.11:0,78,745	0/0:27,0:27:63.06:0,63,597	0/0:24,0:24:57.07:0,57,542	0/0:24,0:24:63.09:0,63,604	0/0:24,0:24:63.09:0,63,604	0/0:25,0:25:72.10:0,72,690	0/0:28,0:28:81.12:0,81,778	0/0:20,0:20:57.08:0,57,545	0/0:19,0:19:51.04:0,51,484	0/0:23,0:23:63.08:0,63,596	0/0:25,0:25:66.09:0,66,632	0/0:16,0:16:45.07:0,45,434	0/0:25,0:25:63.06:0,63,597	0/0:23,0:23:63.08:0,63,602	0/0:15,0:15:42.07:0,42,406	0/0:25,0:25:69.09:0,69,658	0/0:24,0:24:63.09:0,63,605	0/0:37,0:37:99:0,99,932	0/0:17,0:17:48.50:0,48,449
chr10	52035412	.	C	CAAAG	15276.55	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-16.166;DP=794;FS=7.094;HRun=0;HaplotypeScore=113.4364;InbreedingCoeff=0.9998;MQ=85.58;MQ0=1;MQRankSum=-5.057;QD=54.36;ReadPosRankSum=-0.382;VQSLOD=6.0002;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,21:25:57.15:1318,57,0	1/1:0,9:12:27.09:688,27,0	0/0:35,0:33:81.22:0,81,1303	0/0:25,0:25:51.17:0,51,886	0/0:34,0:34:90.29:0,90,1549	0/0:26,0:26:69.24:0,69,1209	0/0:16,0:16:42.14:0,42,731	1/1:8,15:24:51.17:1189,51,0	0/0:25,0:25:69.24:0,69,1209	0/0:43,0:43:99:0,108,1868	0/0:29,0:29:78.23:0,78,1299	0/0:40,0:40:99:0,102,1753	0/0:37,0:37:99:0,99,1727	0/0:31,0:31:84.29:0,84,1467	1/1:7,28:35:78.27:1991,78,0	1/1:5,29:35:81.28:2063,81,0	1/1:3,17:20:45.15:1149,45,0	1/1:9,12:22:33.11:843,33,0	1/1:7,9:16:33.11:770,33,0	1/1:2,18:20:54.19:1379,54,0	1/1:5,28:31:66.23:1685,66,0	0/0:33,0:33:81.28:0,81,1409	0/0:32,0:32:93.29:0,93,1575	0/0:20,0:20:48.15:0,48,800	0/0:35,0:35:90.31:0,90,1570	0/0:35,0:34:75.25:0,75,1290	1/1:5,31:36:87.30:2202,87,0	0/0:17,0:17:48.16:0,48,841
chr10	52035920	.	G	GA	7673.04	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=-14.652;DP=615;FS=6.026;HRun=6;HaplotypeScore=60.7280;InbreedingCoeff=0.9288;MQ=74.89;MQ0=0;MQRankSum=-0.752;QD=28.21;ReadPosRankSum=0.696;VQSLOD=5.4176;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,21:23:48.14:705,48,0	1/1:0,8:9:27.09:338,27,0	0/1:21,0:20:5.57:6,0,226	0/0:22,0:21:49.38:0,49,436	0/0:30,0:30:81.18:0,81,826	0/0:23,0:23:66.13:0,66,667	0/0:17,0:17:51.10:0,51,513	1/1:4,37:41:99:1301,105,0	0/0:16,1:17:7.36:0,7,390	0/0:25,0:25:72.13:0,72,724	0/0:27,0:27:75.17:0,75,765	0/0:19,0:19:48.10:0,48,490	0/0:24,0:24:63.14:0,63,643	0/0:23,0:23:63.14:0,63,642	1/1:2,22:24:54.17:679,54,0	1/1:2,27:29:69.22:868,69,0	1/1:3,10:13:21.01:241,21,0	1/1:1,14:15:39.12:491,39,0	1/1:1,23:24:69.14:820,69,0	1/1:3,21:24:60.19:752,60,0	1/1:2,13:15:30.10:377,30,0	0/0:20,0:20:57.13:0,57,582	0/0:17,0:17:45.10:0,45,459	0/0:7,0:7:18.04:0,18,184	0/0:30,0:30:87.18:0,87,880	0/0:28,0:28:81.18:0,81,826	1/1:3,31:34:87.28:1094,87,0	0/0:14,0:14:42.06:0,42,418
chr10	52037195	.	CA	C	7769.69	PASS	AB=0.565;AC=29;AF=0.518;AN=56;BaseQRankSum=12.896;DP=655;FS=8.206;HRun=9;HaplotypeScore=65.9161;InbreedingCoeff=0.9271;MQ=75.84;MQ0=0;MQRankSum=-2.411;QD=21.76;ReadPosRankSum=2.112;VQSLOD=5.6997;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:87.21:0,87,985	1/1:1,9:10:18.01:165,18,0	0/0:21,1:23:20.63:0,21,458	0/0:19,0:18:45.03:0,45,475	0/0:29,0:30:84.07:0,84,941	0/0:29,0:29:87.25:0,87,994	0/0:16,0:16:42.10:0,42,466	1/1:9,31:40:92.99:850,93,0	0/0:20,0:20:60.18:0,60,691	0/0:22,0:22:60.18:0,60,691	0/0:15,0:16:44.95:0,45,490	1/1:2,19:21:54.03:494,54,0	1/1:1,28:29:72.04:659,72,0	0/0:19,0:19:54.16:0,54,623	1/1:2,14:16:36.02:330,36,0	1/1:4,25:29:57.03:522,57,0	1/1:0,27:27:72.04:657,72,0	1/1:1,15:16:33.23:372,33,0	1/1:2,21:23:63.03:577,63,0	1/1:8,22:30:78.03:712,78,0	1/1:4,13:17:41.81:384,42,0	1/1:0,16:16:45.02:411,45,0	1/1:2,28:30:50.62:634,51,0	0/1:3,10:13:21.41:214,0,21	0/0:26,1:27:47.75:0,48,803	0/0:31,0:31:87.25:0,87,996	1/1:14,26:40:87:790,87,0	0/0:11,0:11:28.47:0,28,333
chr10	52037286	.	GTTAAC	G	6008.44	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=14.028;DP=641;FS=4.161;HRun=0;HaplotypeScore=118.5735;InbreedingCoeff=0.9142;MQ=73.75;MQ0=0;MQRankSum=-5.173;QD=42.61;ReadPosRankSum=-0.234;VQSLOD=4.5335;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:90.31:0,90,2656	0/0:15,0:15:45.15:0,45,1320	0/0:8,0:8:18.06:0,18,506	0/1:14,0:14:4.29:4,0,719	0/0:31,0:31:81.28:0,81,2445	0/0:28,0:27:81.28:0,81,2430	0/0:18,0:18:54.19:0,54,1599	1/1:5,25:30:75.22:1492,75,0	0/0:20,0:20:60.21:0,60,1860	0/0:37,0:37:99:0,111,3340	0/0:26,0:26:75.26:0,75,2324	0/0:21,0:21:54.19:0,54,1674	0/0:27,0:27:72.25:0,72,2210	0/0:19,0:19:54.19:0,54,1638	0/0:17,0:17:48.16:0,48,1480	0/0:30,0:30:81.28:0,81,2503	0/0:27,0:27:66.23:0,66,2031	0/0:19,0:19:54.19:0,54,1673	1/1:0,13:13:39.07:735,39,0	1/1:3,31:34:78.13:1520,78,0	1/1:3,16:19:33.11:692,33,0	0/0:14,0:14:39.13:0,39,1171	0/0:23,0:23:57.20:0,57,1756	0/0:15,0:15:36.12:0,36,1116	0/0:16,0:16:45.15:0,45,1344	0/0:37,0:37:99:0,108,3298	1/1:2,29:31:78.20:1565,78,0	0/0:19,0:19:54.19:0,54,1674
chr10	52166975	.	GTTA	G	2066.79	PASS	AB=0.969;AC=12;AF=0.240;AN=50;BaseQRankSum=5.596;DP=283;FS=19.283;HRun=0;HaplotypeScore=46.6586;InbreedingCoeff=0.6867;MQ=70.82;MQ0=0;MQRankSum=-2.222;QD=22.47;ReadPosRankSum=-1.691;VQSLOD=1.4399;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:42.13:0,42,813	0/0:5,0:5:9.03:0,9,189	0/0:7,0:6:0.20:0,0,56	0/1:7,0:7:2.16:2,0,24	0/1:14,1:15:11.72:12,0,543	0/0:22,0:22:54.17:0,54,1063	./.	1/1:18,15:33:81.25:1164,81,0	0/0:8,0:8:21.07:0,21,440	0/0:7,0:7:18.06:0,18,345	0/0:5,0:5:9.02:0,9,154	0/0:2,0:2:6.02:0,6,99	0/0:17,0:17:27.07:0,27,477	0/0:7,0:7:12.03:0,12,198	0/0:7,0:7:15.05:0,15,290	0/0:3,0:3:9.03:0,9,175	0/0:17,0:17:36.08:0,36,645	0/0:10,0:10:30.07:0,30,567	1/1:6,5:11:21.04:274,21,0	1/1:2,2:4:6.02:80,6,0	1/1:5,6:11:24.06:297,24,0	./.	0/0:7,0:7:15.03:0,15,230	./.	0/0:15,0:15:39.13:0,39,745	0/0:13,0:13:36.12:0,36,700	1/1:1,9:10:27.09:401,27,0	0/0:14,0:14:33.09:0,33,581
chr10	52167014	.	T	TTAC	3802.44	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=0.105;DP=258;FS=9.201;HRun=0;HaplotypeScore=45.9471;InbreedingCoeff=0.7692;MQ=68.62;MQ0=0;MQRankSum=-4.122;QD=36.21;ReadPosRankSum=-3.247;VQSLOD=2.2374;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:30.05:0,30,431	0/0:4,0:4:12.02:0,12,148	0/0:4,0:3:5.61:0,6,59	0/0:5,0:5:3.97:0,4,54	0/0:12,0:12:30.08:0,30,434	0/0:15,0:15:42.13:0,42,647	0/0:1,0:1:3.01:0,3,48	1/1:7,35:43:99:1871,111,0	0/0:5,0:5:12.04:0,12,190	0/0:9,0:9:24.03:0,24,295	0/0:3,0:3:9.03:0,9,138	0/1:5,0:5:10.27:56,0,10	1/1:13,0:13:26.20:148,26,0	0/0:4,0:4:9.02:0,9,118	0/0:11,0:11:33.11:0,33,525	0/0:3,0:3:6.02:0,6,96	0/0:14,0:14:39.11:0,39,595	0/0:14,0:14:42.09:0,42,599	1/1:4,12:17:30.11:773,30,0	1/1:0,3:3:8.95:142,9,0	1/1:4,5:9:23.90:348,24,0	1/1:4,0:4:8.81:54,9,0	1/1:2,0:2:5.86:35,6,0	1/1:2,0:2:5.85:33,6,0	0/0:12,0:12:36.11:0,36,555	0/0:16,0:16:45.13:0,45,659	1/1:4,3:7:21.03:342,21,0	0/0:10,0:10:27.09:0,27,423
chr10	52167022	.	A	AATAATG	1915.87	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-5.152;DP=289;FS=3.070;HRun=0;HaplotypeScore=70.8315;InbreedingCoeff=0.8530;MQ=70.50;MQ0=0;MQRankSum=-6.058;QD=43.54;ReadPosRankSum=0.384;VQSLOD=2.9761;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:27.08:0,27,578	0/0:4,0:4:9.02:0,9,165	0/0:4,0:4:9.02:0,9,133	0/0:6,0:7:14.81:0,15,190	0/0:12,0:12:36.10:0,36,664	0/0:16,0:16:45.15:0,45,1001	0/0:2,0:2:6:0,6,93	0/0:41,0:41:95.14:0,95,787	0/0:6,0:6:15.05:0,15,328	0/0:11,0:11:33.08:0,33,618	0/0:3,0:3:9.03:0,9,207	1/1:1,5:6:12.04:418,12,0	1/1:1,16:18:27.09:940,27,0	0/0:5,0:5:15.03:0,15,259	0/0:13,0:13:39.12:0,39,835	0/0:3,0:3:9.03:0,9,187	0/0:14,0:14:42.13:0,42,918	0/0:16,0:16:42.09:0,42,872	0/0:15,0:15:29.41:0,29,213	0/0:6,0:6:17.10:0,17,153	0/0:9,0:9:16.50:0,17,99	1/1:0,5:6:11.96:330,12,0	1/1:0,7:8:8.76:245,9,0	1/1:0,4:6:6.02:141,6,0	0/0:14,0:14:42.12:0,42,883	0/0:15,0:15:42.14:0,42,967	0/0:7,0:7:17.07:0,17,115	0/0:11,0:11:30.10:0,30,668
chr10	52167977	.	T	TCA	1729.32	PASS	AB=1.000;AC=43;AF=0.860;AN=50;BaseQRankSum=2.818;DP=571;FS=0.000;HRun=0;HaplotypeScore=119.3287;InbreedingCoeff=0.4632;MQ=53.96;MQ0=13;MQRankSum=-0.720;QD=3.98;ReadPosRankSum=-1.662;VQSLOD=2.0478;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:19:2.70:23,3,0	1/1:4,0:4:3.01:40,3,0	./.	./.	0/1:11,0:11:0:0,0,0	1/1:32,0:32:38.14:348,38,0	1/1:31,0:31:9.36:60,9,0	1/1:19,0:16:1.25:3,1,0	1/1:16,0:16:5.99:50,6,0	1/1:29,0:29:26.09:228,26,0	1/1:8,0:8:2.43:24,2,0	1/1:22,0:20:4.36:48,4,0	1/1:21,0:20:6.52:41,7,0	1/1:21,0:20:13.70:89,14,0	0/0:21,0:21:2.86:0,3,19	1/1:9,3:13:9.03:131,9,0	0/0:16,0:16:15.04:0,15,159	0/0:21,0:22:17.63:0,18,168	1/1:14,0:14:6.02:82,6,0	1/1:11,0:9:2.64:22,3,0	1/1:40,0:38:23.06:168,23,0	./.	1/1:14,0:14:3:26,3,0	1/1:38,0:38:5.89:45,6,0	1/1:21,0:21:8.98:74,9,0	1/1:23,0:22:15.29:146,15,0	1/1:17,0:17:20.21:172,20,0	1/1:8,0:7:3.01:38,3,0
chr10	52167999	.	A	ACACACACACACA	3838.44	PASS	AB=1.000;AC=41;AF=0.820;AN=50;BaseQRankSum=-3.827;DP=601;FS=2.548;HRun=0;HaplotypeScore=177.1207;InbreedingCoeff=0.5276;MQ=43.52;MQ0=37;MQRankSum=-0.981;QD=8.33;ReadPosRankSum=-3.483;VQSLOD=1.7857;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:21:2.97:65,3,0	1/1:8,0:8:3.48:41,3,0	./.	./.	./.	1/1:37,0:35:39.58:731,40,0	1/1:35,0:34:18.28:308,18,0	1/1:18,0:15:8.32:25,8,0	1/1:13,0:13:3.48:90,3,0	1/1:27,0:26:19.52:247,20,0	1/1:10,0:10:3.48:51,3,0	1/1:17,5:21:0.79:1,1,0	1/1:18,0:17:3.83:68,4,0	1/1:30,0:29:15.92:326,16,0	0/0:18,0:17:2.89:0,3,16	0/0:16,0:16:9.02:0,9,128	0/0:27,0:27:14.15:0,14,451	0/0:29,0:27:17.52:0,18,395	1/1:12,0:12:6.03:69,6,0	1/1:15,0:13:3.01:65,3,0	1/1:43,0:37:25.40:527,25,0	0/1:15,0:14:0:1,0,0	1/1:15,0:14:2.61:108,3,0	1/1:43,0:40:5.99:118,6,0	1/1:20,0:20:9.42:337,9,0	1/1:27,0:26:20.11:218,20,0	1/1:16,0:16:21.04:408,21,0	1/1:10,0:8:3.01:33,3,0
chr10	52170729	.	A	AT	6206.60	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-9.460;DP=559;FS=0.000;HRun=5;HaplotypeScore=52.6340;InbreedingCoeff=0.9936;MQ=71.53;MQ0=0;MQRankSum=-2.232;QD=34.87;ReadPosRankSum=1.329;VQSLOD=4.8196;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:45.11:0,45,483	0/0:5,0:5:15.04:0,15,161	0/0:11,0:11:30.04:0,30,299	0/0:7,0:7:18:0,18,172	0/0:30,0:30:87.22:0,87,935	0/0:29,0:29:81.20:0,81,871	0/0:26,0:26:75.17:0,75,798	0/0:28,0:28:72.17:0,72,766	0/0:17,0:17:45.11:0,45,483	0/0:20,0:20:54.12:0,54,572	0/0:20,0:20:57.13:0,57,605	1/1:2,21:23:60.19:788,60,0	1/1:1,19:20:54.17:701,54,0	0/0:12,0:12:36.09:0,36,387	0/0:40,0:40:99:0,114,1225	0/0:18,0:18:51.13:0,51,548	0/0:18,0:18:48.11:0,48,515	0/0:31,0:31:81.17:0,81,859	1/1:0,17:17:51.17:671,51,0	1/1:1,24:25:72.23:947,72,0	1/1:1,7:8:15.05:197,15,0	1/1:0,11:11:33.11:434,33,0	1/1:1,23:24:63.16:809,63,0	1/1:1,18:19:51.17:671,51,0	0/0:23,0:23:66.13:0,66,698	0/0:15,0:15:42.10:0,42,452	1/1:1,30:31:75.24:987,75,0	0/0:16,0:16:42.11:0,42,451
chr10	52171145	.	GC	G	9073.72	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=14.855;DP=766;FS=21.694;HRun=2;HaplotypeScore=77.9003;InbreedingCoeff=0.9996;MQ=88.52;MQ0=0;MQRankSum=-6.665;QD=35.86;ReadPosRankSum=4.767;VQSLOD=2.9961;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,141,2065	0/0:12,0:12:36.12:0,36,539	0/0:29,0:29:81.26:0,81,1184	0/0:28,0:28:78.25:0,78,1117	0/0:31,0:31:93.30:0,93,1373	0/0:25,0:25:72.24:0,72,1076	0/0:40,0:40:99:0,120,1799	0/0:44,0:44:99:0,132,1925	0/0:28,0:28:81.23:0,81,1189	0/0:24,0:24:72.23:0,72,1056	0/0:18,0:18:54.18:0,54,808	1/1:0,36:36:96.31:1247,96,0	1/1:0,20:20:60.20:779,60,0	0/0:31,0:31:93.31:0,93,1391	0/0:26,0:26:78.25:0,78,1150	0/0:30,0:30:84.27:0,84,1239	0/0:28,0:28:84.26:0,84,1235	0/0:13,0:13:33.11:0,33,495	1/1:0,22:22:66.21:856,66,0	1/1:1,26:27:72.23:933,72,0	1/1:0,43:43:99:1558,120,0	1/1:0,31:31:87.28:1130,87,0	1/1:3,26:29:72.23:935,72,0	1/1:0,23:23:63.20:818,63,0	0/0:14,0:14:39.13:0,39,584	0/0:34,0:34:99:0,102,1528	1/1:0,22:22:63.20:818,63,0	0/0:9,0:9:24.08:0,24,358
chr10	52172378	.	G	GAAGTGT	22462.61	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-10.280;DP=721;FS=11.996;HRun=0;HaplotypeScore=140.9912;InbreedingCoeff=0.9996;MQ=56.41;MQ0=0;MQRankSum=-19.912;QD=79.37;ReadPosRankSum=0.496;VQSLOD=5.7468;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,35:47:99:3207,102,0	0/0:12,0:12:36.11:0,36,774	0/0:26,0:23:51.13:0,51,1101	0/0:18,0:17:36.12:0,36,827	0/0:33,0:33:99:0,99,2265	0/0:22,0:22:63.22:0,63,1448	0/0:26,0:26:75.24:0,75,1612	0/0:33,0:33:84.26:0,84,1737	0/0:30,0:30:81.25:0,81,1779	0/0:21,0:21:60.21:0,60,1399	0/0:19,0:19:51.16:0,51,1138	1/1:7,18:26:72.25:2357,72,0	1/1:4,29:34:90.31:3074,90,0	0/0:35,0:35:96.33:0,96,2185	0/0:31,0:31:93.29:0,93,2039	0/0:26,0:26:66.21:0,66,1467	0/0:26,0:26:60.18:0,60,1327	0/0:21,0:20:63.22:0,63,1447	1/1:15,11:28:63.22:2034,63,0	1/1:7,19:26:66.23:2045,66,0	1/1:7,18:25:45.15:1496,45,0	1/1:6,15:21:60.20:1881,60,0	1/1:5,15:20:51.18:1711,51,0	1/1:4,14:18:36.12:1267,36,0	0/0:19,0:19:57.19:0,57,1217	0/0:32,0:32:90.31:0,90,2027	1/1:4,31:36:99:3392,99,0	0/0:8,0:8:24.08:0,24,560
chr10	52173267	.	T	TGG	5317.84	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=16.280;DP=582;FS=1.195;HRun=0;HaplotypeScore=107.6648;InbreedingCoeff=0.9752;MQ=97.21;MQ0=0;MQRankSum=-9.850;QD=39.69;ReadPosRankSum=1.114;VQSLOD=6.7267;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,126,2016	0/0:8,0:8:21.07:0,21,343	0/0:25,0:25:75.26:0,75,1205	0/0:36,0:36:92.82:0,93,1440	0/0:16,0:16:48.16:0,48,781	0/0:22,0:22:63.22:0,63,1028	0/0:17,0:17:51.16:0,51,808	0/0:35,0:35:99:0,105,1678	0/0:25,0:25:75.24:0,75,1197	0/0:23,0:23:60.20:0,60,978	0/0:18,0:18:54.18:0,54,881	1/1:1,18:19:57.18:797,57,0	1/1:0,27:27:78.25:1120,78,0	0/0:19,0:19:54.18:0,54,881	0/0:38,0:38:99:0,111,1759	0/0:24,0:24:72.25:0,72,1173	0/0:25,0:25:75.19:0,75,1168	0/0:16,0:16:48.12:0,48,754	1/1:3,11:14:42.14:628,42,0	1/1:0,11:14:39.09:579,39,0	1/1:1,21:22:60.01:838,60,0	1/1:1,2:3:6.02:91,6,0	1/1:2,5:7:14.87:199,15,0	1/1:1,6:7:12.04:222,12,0	0/0:27,0:27:78.27:0,78,1271	0/0:20,0:20:57.18:0,57,879	1/1:5,16:21:47.62:843,48,0	0/0:9,0:9:27.09:0,27,440
chr10	52173269	.	CCTGG	C	5196.64	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=16.114;DP=583;FS=0.377;HRun=0;HaplotypeScore=130.0130;InbreedingCoeff=0.9756;MQ=95.46;MQ0=0;MQRankSum=-10.649;QD=38.21;ReadPosRankSum=2.166;VQSLOD=5.1616;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,132,3751	0/0:8,0:8:24.08:0,24,695	0/0:23,0:23:69.20:0,69,1792	0/0:35,0:35:99:0,102,2515	0/0:15,0:15:45.15:0,45,1283	0/0:23,0:23:69.24:0,69,1948	0/0:18,0:18:54.19:0,54,1504	0/0:37,0:37:99:0,111,3136	0/0:24,0:24:72.25:0,72,2087	0/0:24,0:24:72.25:0,72,2007	0/0:18,0:18:54.19:0,54,1492	1/1:0,19:19:57.18:820,57,0	1/1:0,27:27:78.25:1170,78,0	0/0:19,0:19:57.20:0,57,1610	0/0:37,0:37:99:0,111,3202	0/0:24,0:24:72.25:0,72,2053	0/0:25,0:25:72.25:0,72,2081	0/0:16,0:16:48.16:0,48,1366	1/1:3,11:14:35.63:577,36,0	1/1:2,11:13:36.12:566,36,0	1/1:1,21:22:53.89:781,54,0	1/1:1,2:3:6.02:95,6,0	1/1:2,5:7:15.05:210,15,0	1/1:4,6:8:12.02:192,12,0	0/0:27,0:27:81.28:0,81,2347	0/0:20,0:20:60.21:0,60,1727	1/1:6,15:21:56.86:786,57,0	0/0:9,0:9:27.09:0,27,782
chr10	52173270	.	CTGG	C	4716.04	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=16.246;DP=593;FS=0.000;HRun=0;HaplotypeScore=121.3839;InbreedingCoeff=0.9691;MQ=94.98;MQ0=0;MQRankSum=-9.032;QD=34.17;ReadPosRankSum=2.305;VQSLOD=5.2578;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,138,3294	0/0:8,0:8:24.08:0,24,591	0/0:20,0:21:63.19:0,63,1481	0/0:37,0:37:99:0,107,2289	0/0:15,0:15:45.14:0,45,1060	0/0:23,0:23:69.22:0,69,1648	0/0:18,0:18:54.15:0,54,1278	0/0:38,0:38:99:0,114,2698	0/0:24,0:24:72.25:0,72,1775	0/0:25,0:25:75.26:0,75,1834	0/0:20,0:20:60.18:0,60,1337	1/1:19,0:19:57.16:733,57,0	1/1:28,0:28:81.26:1095,81,0	0/0:19,0:19:57.18:0,57,1352	0/0:37,0:37:99:0,111,2735	0/0:24,0:24:72.24:0,72,1726	0/0:26,0:26:75.26:0,75,1824	0/0:16,0:16:48.16:0,48,1180	1/1:14,0:14:36.07:505,36,0	1/1:14,0:14:39.13:545,39,0	1/1:22,0:22:53.10:693,53,0	1/1:2,1:3:6.02:84,6,0	1/1:5,2:7:15.05:193,15,0	1/1:10,0:8:8.02:147,8,0	0/0:27,0:27:81.28:0,81,1996	0/0:22,0:22:66.23:0,66,1554	1/1:18,2:21:52.72:721,53,0	0/0:9,0:9:27.09:0,27,665
chr10	52173273	.	G	GCC	6743.50	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=17.021;DP=603;FS=4.173;HRun=0;HaplotypeScore=109.8709;InbreedingCoeff=0.9900;MQ=90.65;MQ0=0;MQRankSum=-10.420;QD=41.63;ReadPosRankSum=-0.972;VQSLOD=6.2451;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,132,2128	0/0:8,0:8:24.08:0,24,392	0/0:21,0:21:47.65:0,48,954	0/0:31,0:31:88.25:0,88,1382	0/0:15,0:15:42.14:0,42,685	0/0:22,0:22:66.21:0,66,1052	0/0:18,0:18:54.17:0,54,857	0/0:35,0:35:99:0,102,1641	0/0:24,0:24:72.25:0,72,1173	0/0:28,0:28:75.25:0,75,1206	0/0:18,0:18:54.18:0,54,877	1/1:26,0:26:75.23:1187,75,0	1/1:31,0:31:90.28:1416,90,0	0/0:19,0:19:54.18:0,54,881	0/0:37,0:37:99:0,111,1808	0/0:23,0:23:69.24:0,69,1125	0/0:25,0:25:72.25:0,72,1175	0/0:16,0:16:48.16:0,48,781	1/1:14,0:15:45.13:744,45,0	1/1:18,0:18:45.11:725,45,0	1/1:24,0:24:55.03:948,55,0	1/1:6,0:6:12.04:173,12,0	1/1:10,0:10:24.08:422,24,0	1/1:7,3:8:12.51:238,13,0	0/0:27,0:27:81.28:0,81,1322	0/0:21,0:21:63.22:0,63,1021	1/1:18,4:22:56.92:890,57,0	0/0:9,0:9:27.09:0,27,440
chr10	52174618	.	G	GA	4771.35	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-11.981;DP=688;FS=0.000;HRun=1;HaplotypeScore=63.5424;InbreedingCoeff=0.9999;MQ=81.55;MQ0=0;MQRankSum=-0.999;QD=43.77;ReadPosRankSum=0.593;VQSLOD=4.8309;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:69.22:0,69,895	0/0:15,0:15:45.14:0,45,572	0/0:19,0:19:38.20:0,38,552	0/0:18,0:18:37.96:0,38,498	0/0:29,0:29:87.28:0,87,1129	0/0:29,0:29:81.26:0,81,1050	0/0:21,0:21:63.18:0,63,790	0/0:37,0:37:99:0,105,1352	0/0:16,0:16:45.15:0,45,584	0/0:31,0:31:90.28:0,90,1147	0/0:16,0:16:45.14:0,45,572	0/0:28,0:28:78.22:0,78,983	0/0:20,0:20:60.17:0,60,749	0/0:26,0:26:78.22:0,78,983	0/0:35,0:35:99:0,102,1310	0/0:43,0:43:99:0,120,1558	0/0:20,0:20:57.16:0,57,723	0/0:14,0:14:39.07:0,39,472	1/1:0,23:23:69.23:1013,69,0	1/1:0,29:29:87.18:1251,87,0	1/1:0,28:29:84.28:1249,84,0	0/0:27,0:27:81.26:0,81,1048	0/0:22,0:22:60.19:0,60,779	0/0:18,0:18:54.17:0,54,689	0/0:28,0:28:83.93:0,84,1048	0/0:24,0:24:72.23:0,72,923	1/1:0,28:28:84.28:1259,84,0	0/0:18,0:18:54.18:0,54,701
chr10	52177560	.	A	AG	9398.79	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=10.867;DP=706;FS=5.456;HRun=2;HaplotypeScore=141.6656;InbreedingCoeff=0.9996;MQ=84.33;MQ0=0;MQRankSum=-1.424;QD=38.52;ReadPosRankSum=1.166;VQSLOD=4.0672;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:75.12:0,75,893	0/0:8,0:8:24.08:0,24,297	0/0:26,0:26:69.12:0,69,819	0/0:18,0:18:44.47:0,44,494	0/0:30,0:30:66.33:0,66,452	0/0:32,0:32:86.63:0,87,545	0/0:26,0:26:41.02:0,41,379	0/0:37,0:36:99:0,102,1221	0/0:24,0:24:53.07:0,53,401	0/0:20,0:20:52.46:0,52,332	0/0:19,0:19:49.74:0,50,305	1/1:0,26:26:69.23:993,69,0	1/1:3,26:29:63.21:906,63,0	0/0:26,0:26:76.62:0,77,503	0/0:35,0:35:99:0,102,1240	0/0:21,0:21:60.19:0,60,743	0/0:30,0:30:87.27:0,87,1078	0/0:19,0:19:54.14:0,54,653	1/1:0,29:29:87.25:1198,87,0	1/1:1,35:36:99:1477,105,0	1/1:0,39:40:99:1597,111,0	1/1:0,15:15:45.15:639,45,0	1/1:1,16:16:42.14:604,42,0	1/1:2,23:25:66.22:950,66,0	0/0:30,0:30:84.70:0,85,511	0/0:24,0:24:70.03:0,70,426	1/1:2,25:27:72.24:1034,72,0	0/0:11,0:11:32.25:0,32,199
chr10	52177731	.	A	ACT	7400.02	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-2.304;DP=797;FS=7.292;HRun=0;HaplotypeScore=114.8529;InbreedingCoeff=0.9980;MQ=88.34;MQ0=2;MQRankSum=-3.596;QD=43.27;ReadPosRankSum=0.212;VQSLOD=6.0419;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,49:52:99:2107,117,0	1/1:2,10:12:30.10:518,30,0	0/0:29,0:29:75.25:0,75,1037	0/0:29,0:29:65.23:0,65,984	0/0:25,0:25:72.24:0,72,1008	0/0:26,0:26:75.25:0,75,1047	0/0:30,0:30:87.29:0,87,1216	1/1:5,29:36:90.29:1588,90,0	0/0:37,0:37:99:0,105,1469	0/0:33,0:33:93.31:0,93,1301	0/0:18,0:18:45.15:0,45,627	0/0:35,0:35:96.31:0,96,1320	0/0:38,0:38:99:0,111,1513	0/0:29,0:29:84.27:0,84,1156	1/1:2,36:37:96.33:1729,96,0	1/1:2,30:32:81.28:1458,81,0	0/0:25,0:25:75.23:0,75,1029	0/0:15,0:15:42.07:0,42,571	0/0:25,0:25:69.23:0,69,964	0/0:26,0:26:72.23:0,72,988	0/0:45,0:45:99:0,123,1705	0/0:30,0:30:87.26:0,87,1184	0/0:20,0:20:57.19:0,57,798	0/0:29,0:29:84.28:0,84,1175	0/0:22,0:22:63.21:0,63,882	0/0:29,0:29:81.26:0,81,1118	0/0:24,0:24:69.23:0,69,965	0/0:7,0:7:18.06:0,18,252
chr10	52179083	.	AG	A	5213.17	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=5.240;DP=733;FS=4.098;HRun=2;HaplotypeScore=95.7424;InbreedingCoeff=0.9981;MQ=90.66;MQ0=0;MQRankSum=-6.491;QD=36.20;ReadPosRankSum=-0.657;VQSLOD=4.7698;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,37:37:99:1320,102,0	1/1:0,13:13:36.12:467,36,0	0/0:30,0:30:67.98:0,68,1032	0/0:32,0:31:81.34:0,81,1176	0/0:45,0:45:99:0,132,1939	0/0:37,0:37:99:0,111,1608	0/0:23,0:23:66.22:0,66,989	1/1:0,28:28:84.27:1088,84,0	0/0:20,0:20:60.20:0,60,899	0/0:29,0:29:87.29:0,87,1303	0/0:15,0:15:42.14:0,42,630	0/0:18,0:18:51.17:0,51,762	0/0:27,0:27:81.25:0,81,1191	0/0:31,1:32:87.27:0,87,1278	1/1:0,39:39:99:1441,111,0	1/1:0,27:27:69.20:896,69,0	0/0:30,0:30:90.30:0,90,1348	0/0:22,0:22:63.20:0,63,923	0/0:23,0:23:69.18:0,69,948	0/0:30,0:30:90.29:0,90,1328	0/0:20,0:20:60.19:0,60,874	0/0:24,0:24:69.23:0,69,1030	0/0:17,0:17:48.04:0,48,670	0/0:18,0:18:54.18:0,54,808	0/0:31,0:31:93.31:0,93,1390	0/0:33,0:33:99:0,99,1476	0/0:27,0:27:78.24:0,78,1142	0/0:6,0:6:18.04:0,18,249
chr10	52179840	.	TAGA	T	4787.50	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=13.167;DP=672;FS=8.140;HRun=0;HaplotypeScore=93.8463;InbreedingCoeff=0.9996;MQ=85.03;MQ0=0;MQRankSum=-2.331;QD=39.90;ReadPosRankSum=4.068;VQSLOD=5.8618;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:78.24:0,78,1681	0/0:21,0:21:60.14:0,60,1247	0/0:22,0:22:48.18:0,48,1064	0/0:20,0:20:53.35:0,53,1167	0/0:34,0:34:96.30:0,96,2088	0/0:35,0:35:99:0,102,2079	0/0:20,0:20:60.20:0,60,1298	0/0:27,0:27:78.26:0,78,1675	0/0:18,0:18:48.16:0,48,1087	0/0:30,0:30:87.28:0,87,1821	0/0:26,0:26:78.22:0,78,1598	1/1:2,26:28:72.25:1196,72,0	1/1:0,26:26:72.25:1197,72,0	0/0:28,0:28:81.26:0,81,1781	0/0:25,0:25:75.26:0,75,1675	0/0:31,0:31:93.29:0,93,1974	0/0:9,0:9:27.04:0,27,521	0/0:22,0:22:66.21:0,66,1447	0/0:18,0:18:48.16:0,48,1083	0/0:25,0:25:72.21:0,72,1503	0/0:13,0:13:39.13:0,39,883	1/1:0,21:21:42.14:698,42,0	1/1:0,15:15:35.88:599,36,0	1/1:2,28:30:66.23:1097,66,0	0/0:29,0:29:87.24:0,87,1666	0/0:31,0:31:87.26:0,87,1787	0/0:30,0:29:84.20:0,84,1644	0/0:11,0:11:30.10:0,30,679
chr10	52181161	.	TGCAGACACAC	T	2767.87	PASS	AB=0.995;AC=28;AF=0.500;AN=56;BaseQRankSum=1.229;DP=653;FS=18.300;HRun=0;HaplotypeScore=239.8336;InbreedingCoeff=0.0825;MQ=75.41;MQ0=4;MQRankSum=-2.064;QD=6.12;ReadPosRankSum=0.440;VQSLOD=1.1887;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:36:0.52:0,1,493	0/0:5,0:5:10.27:0,10,410	0/0:38,0:29:62.67:0,63,960	0/0:34,0:29:58.67:0,59,957	1/1:17,0:17:2.22:59,2,0	1/1:12,1:13:19.23:135,19,0	1/1:22,0:22:22.86:185,23,0	0/0:30,0:29:81.26:0,81,1295	1/1:20,1:21:28.39:329,28,0	1/1:26,0:26:31.67:255,32,0	1/1:6,0:7:3.74:9,4,0	0/1:32,0:32:24.43:24,0,522	0/1:28,0:28:99:135,0,298	0/1:27,2:29:2.84:434,0,3	0/1:37,0:37:99:136,0,960	0/1:21,0:21:77.38:77,0,645	0/0:23,0:23:49.55:0,50,1276	0/0:20,0:20:51.75:0,52,1222	0/1:24,0:21:99:206,0,192	0/1:25,0:25:87.19:87,0,766	0/1:31,0:31:99:104,0,1075	0/1:10,0:10:12.64:13,0,247	0/0:14,0:14:17.22:0,17,393	0/1:44,0:44:99:149,0,594	1/1:21,0:21:34.59:253,35,0	1/1:22,0:22:32.03:273,32,0	0/1:16,0:16:35.32:35,0,164	0/1:6,0:6:51.76:52,0,71
chr10	52181164	.	AGACACACG	A	3965.13	PASS	AB=0.985;AC=29;AF=0.518;AN=56;BaseQRankSum=1.449;DP=652;FS=30.848;HRun=0;HaplotypeScore=211.9431;InbreedingCoeff=0.1521;MQ=72.59;MQ0=5;MQRankSum=-1.401;QD=8.77;ReadPosRankSum=1.111;VQSLOD=1.4348;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:36:0.22:0,0,358	0/0:6,0:6:13.22:0,13,327	0/0:35,0:26:62.31:0,62,959	0/0:33,0:28:58.67:0,59,957	1/1:16,1:17:13.90:87,14,0	1/1:11,1:12:18.04:149,18,0	1/1:20,1:21:28.80:231,29,0	0/0:29,0:28:84.27:0,84,1320	1/1:14,5:19:34.33:482,34,0	1/1:21,4:25:45.24:430,45,0	1/1:7,0:7:3.74:9,4,0	0/1:29,0:29:30.85:31,0,323	0/1:25,0:25:99:130,0,195	1/1:22,6:28:48.18:620,48,0	0/1:38,0:38:99:155,0,772	0/1:23,0:22:82.82:83,0,455	0/0:25,0:25:35.56:0,36,1147	0/0:20,0:20:51.75:0,52,1055	0/1:27,0:24:99:220,0,214	0/1:26,0:26:87.37:87,0,601	0/1:33,0:32:99:101,0,857	0/1:11,0:11:13.67:14,0,173	0/0:15,0:15:14.60:0,15,245	0/1:46,0:46:99:150,0,292	1/1:19,2:21:39.03:410,39,0	1/1:9,14:23:45.01:444,45,0	0/1:16,0:16:36.18:36,0,113	0/1:4,1:5:53.71:95,0,54
chr10	52181172	.	GCA	G	986.68	PASS	AB=0.947;AC=27;AF=0.540;AN=50;BaseQRankSum=3.228;DP=663;FS=2.037;HRun=0;HaplotypeScore=158.3455;InbreedingCoeff=0.0384;MQ=62.45;MQ0=11;MQRankSum=-1.872;QD=2.23;ReadPosRankSum=4.271;VQSLOD=2.5370;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:44:8.50:0,9,93	0/1:6,0:6:7.87:8,0,79	./.	./.	0/1:12,0:17:8.14:8,0,19	0/1:15,0:15:5.95:6,0,29	0/1:21,0:20:2.10:2,0,28	0/0:30,0:29:8.94:0,9,75	1/1:18,0:18:13.42:65,13,0	1/1:26,0:26:4.30:39,4,0	./.	1/1:28,5:31:1.72:222,2,0	0/1:23,3:26:7.56:93,0,8	0/1:28,0:28:5.47:71,0,5	0/0:34,0:35:15.86:0,16,311	0/1:21,2:22:53.98:54,0,192	0/1:17,1:27:60.92:61,0,86	0/0:14,0:19:18.39:0,18,146	0/1:25,0:21:4.75:5,0,159	0/0:24,0:28:17.92:0,18,245	0/1:20,0:31:3.31:3,0,217	1/1:11,0:11:11.75:97,12,0	0/1:14,4:18:0.47:84,0,0	1/1:23,18:43:7.16:203,7,0	1/1:22,0:23:10.88:54,11,0	1/1:26,0:24:5.01:35,5,0	0/1:14,1:16:20.09:26,0,20	0/1:9,0:9:5.16:5,0,23
chr10	52181180	.	A	ACG	423.68	PASS	AB=0.958;AC=13;AF=0.232;AN=56;BaseQRankSum=2.257;DP=657;FS=7.868;HRun=0;HaplotypeScore=163.2141;InbreedingCoeff=-0.2830;MQ=54.14;MQ0=13;MQRankSum=1.077;QD=1.56;ReadPosRankSum=-2.295;VQSLOD=0.9558;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:43:29.33:0,29,311	0/0:7,0:7:21:0,21,213	0/0:22,0:12:22.09:0,22,261	0/0:20,0:14:36.53:0,37,382	0/1:15,1:16:9.91:10,0,98	0/1:11,7:18:27.56:28,0,121	0/1:19,1:19:24.55:25,0,187	0/0:29,0:28:83.66:0,84,702	0/1:17,0:17:22.24:22,0,131	0/1:23,2:25:99:188,0,350	0/1:11,0:11:9:9,0,63	0/0:33,0:31:81.28:0,81,663	0/0:26,0:25:59.84:0,60,454	0/1:29,0:29:38.95:39,0,227	0/0:34,0:34:92.95:0,93,903	0/0:23,0:22:52.83:0,53,531	0/0:28,0:28:27.65:0,28,386	0/1:17,0:16:44.25:44,0,150	0/0:27,0:23:36.59:0,37,401	0/1:30,0:30:16.50:16,0,339	0/1:31,0:30:6.17:6,0,343	0/0:15,0:15:29:0,29,231	0/0:20,0:20:44.84:0,45,354	0/0:44,0:44:80.54:0,81,637	0/1:24,1:25:63.80:64,0,181	0/1:22,1:21:99:118,0,198	0/0:13,0:13:4.69:0,5,173	0/1:9,0:9:0.23:0,0,58
chr10	52181714	.	TC	T	12433	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=11.687;DP=768;FS=9.943;HRun=2;HaplotypeScore=96.1651;InbreedingCoeff=0.9854;MQ=84.57;MQ0=0;MQRankSum=-3.865;QD=36.25;ReadPosRankSum=1.932;VQSLOD=4.6813;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:58:99:0,175,2585	0/0:19,0:19:57.15:0,57,810	0/0:23,0:23:66.22:0,66,959	0/0:22,0:22:23.12:0,23,725	1/1:0,21:21:63.14:782,63,0	1/1:0,22:22:57.19:740,57,0	1/1:0,22:22:60.20:779,60,0	0/0:34,0:34:96.31:0,96,1401	1/1:0,23:23:63.20:817,63,0	1/1:0,34:34:99:1310,102,0	1/1:2,16:18:51.16:655,51,0	0/0:23,0:23:66.22:0,66,969	0/0:46,0:46:99:0,135,1994	1/1:0,31:31:87.28:1130,87,0	0/0:37,0:37:99:0,111,1657	0/0:32,1:33:60.36:0,60,1375	0/0:33,0:33:99:0,99,1480	0/0:24,0:24:72.14:0,72,1008	1/1:0,23:23:66.17:824,66,0	1/1:1,33:34:99:1267,99,0	1/1:0,42:42:99:1480,114,0	0/0:31,0:31:90.28:0,90,1307	0/0:26,0:26:72.21:0,72,1021	0/0:16,0:16:48.16:0,48,719	1/1:2,19:21:51.17:662,51,0	1/1:0,27:27:81.26:1052,81,0	1/1:0,23:23:66.21:857,66,0	1/1:0,2:2:6.02:78,6,0
chr10	52182571	.	AT	A	865.22	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.882;DP=598;FS=9.874;HRun=7;HaplotypeScore=54.9246;InbreedingCoeff=0.9654;MQ=74.20;MQ0=0;MQRankSum=0.149;QD=25.45;ReadPosRankSum=-3.995;VQSLOD=2.0003;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:42.13:0,42,528	0/0:8,0:8:24.06:0,24,289	0/0:20,0:19:42.01:0,42,468	0/0:11,0:11:24.08:0,24,301	0/0:30,0:30:81.26:0,81,1014	0/0:31,0:31:81.26:0,81,1018	0/0:21,0:21:57.18:0,57,717	1/1:2,32:34:96.18:960,96,0	0/0:18,0:18:54.17:0,54,679	0/0:30,0:30:84.27:0,84,1050	0/0:20,0:20:54.15:0,54,656	0/0:19,0:19:57.18:0,57,717	0/0:28,0:28:78.25:0,78,981	0/0:26,0:26:78.25:0,78,980	0/0:27,0:27:72.23:0,72,906	0/0:32,0:32:90.22:0,90,1100	0/0:12,0:12:30.06:0,30,349	0/0:14,0:14:42.13:0,42,528	0/0:23,0:23:63.19:0,63,782	0/0:28,0:28:75.18:0,75,890	0/0:20,0:20:57.17:0,57,705	0/0:23,0:23:69.22:0,69,867	0/0:22,0:22:66.20:0,66,817	0/0:12,0:12:30.10:0,30,377	0/0:17,0:17:45.14:0,45,566	0/0:33,0:33:87.28:0,87,1095	0/0:20,0:20:57.15:0,57,682	0/0:5,0:5:12.04:0,12,151
chr10	52183235	.	G	GA	13905.38	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-7.797;DP=388;FS=0.682;HRun=1;HaplotypeScore=31.0366;InbreedingCoeff=0.9326;MQ=75.24;MQ0=0;MQRankSum=-1.101;QD=39.84;ReadPosRankSum=1.257;VQSLOD=4.6411;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,13:14:30.10:474,30,0	1/1:0,6:6:18.06:287,18,0	0/0:7,0:7:12.04:0,12,168	0/0:8,0:8:14.22:0,14,227	1/1:0,26:26:69.17:1068,69,0	1/1:0,16:16:48.16:765,48,0	1/1:0,7:7:9.03:143,9,0	1/1:0,21:21:63.16:899,63,0	1/1:0,12:12:27.09:430,27,0	1/1:0,14:14:42.14:670,42,0	1/1:0,19:19:48.01:704,48,0	1/1:0,5:5:12.04:191,12,0	1/1:0,20:20:51.17:812,51,0	1/1:0,11:11:30.10:477,30,0	1/1:0,14:14:36.12:574,36,0	1/1:0,12:12:24.08:382,24,0	0/0:10,0:10:30.10:0,30,418	0/0:14,0:14:42.09:0,42,545	1/1:0,21:21:63.19:959,63,0	1/1:0,20:20:54.18:860,54,0	1/1:0,3:3:9.03:143,9,0	1/1:2,10:12:21:305,21,0	1/1:0,20:21:48.05:733,48,0	1/1:0,5:5:12.04:191,12,0	1/1:0,13:13:33.11:526,33,0	1/1:0,16:16:48.11:693,48,0	1/1:0,31:31:81.28:1284,81,0	1/1:0,10:10:21.07:332,21,0
chr10	52184005	.	CGTGTGT	C	312.23	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=1.862;DP=616;FS=0.000;HRun=0;HaplotypeScore=180.4040;InbreedingCoeff=0.4584;MQ=46.68;MQ0=9;MQRankSum=-3.074;QD=10.07;ReadPosRankSum=-2.319;VQSLOD=2.1784;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:14,16:31:33.35:406,33,0	0/0:8,0:8:8.53:0,9,162	0/0:43,0:22:18.02:0,18,436	0/0:30,0:17:12.93:0,13,355	0/0:16,0:15:15:0,15,259	0/0:19,0:18:6.15:0,6,118	0/0:19,0:19:1.15:0,1,192	0/0:27,0:26:54.16:0,54,1190	0/0:26,0:25:23.67:0,24,424	0/0:17,0:17:28.67:0,29,547	0/0:24,0:22:11.66:0,12,164	0/0:18,0:17:14.97:0,15,306	0/0:11,0:20:15.04:0,15,295	0/0:24,0:20:8.95:0,9,115	0/0:24,0:24:28.63:0,29,490	0/0:15,0:15:18.64:0,19,311	0/0:20,0:25:46.91:0,47,1161	0/0:29,0:29:69.20:0,69,1902	0/0:12,0:11:24:0,24,456	0/0:16,0:17:7.50:0,7,221	0/0:30,0:30:19.22:0,19,359	0/0:16,0:22:2.36:0,2,78	0/0:14,0:13:9.03:0,9,154	0/0:33,0:32:18.30:0,18,318	0/0:20,0:17:5.16:0,5,126	0/0:21,0:20:41.73:0,42,848	0/0:19,0:22:39.04:0,39,765	0/0:9,0:9:16.65:0,17,495
chr10	52184030	.	G	GTGTGTGTA	5676.82	PASS	AB=1.000;AC=26;AF=0.464;AN=56;BaseQRankSum=9.012;DP=625;FS=1.400;HRun=0;HaplotypeScore=229.7528;InbreedingCoeff=-0.4127;MQ=50.92;MQ0=12;MQRankSum=-8.500;QD=12.10;ReadPosRankSum=5.078;VQSLOD=3.7066;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:34:49.64:0,50,457	1/1:1,3:5:9.03:314,9,0	0/0:35,0:17:45.01:0,45,572	0/0:28,0:12:29.56:0,30,396	0/1:15,0:14:31.59:81,0,32	0/1:18,0:18:14.71:144,0,15	0/1:24,0:24:29.53:30,0,238	0/1:30,0:29:99:322,0,216	0/1:29,0:28:99:260,0,117	0/1:18,0:18:99:155,0,128	0/1:20,0:18:9:84,0,9	0/1:22,0:21:99:130,0,157	0/1:19,0:19:41.58:277,0,42	0/1:21,0:19:97.78:124,0,98	1/1:5,21:30:18.06:584,18,0	1/1:4,10:20:26.94:993,27,0	0/0:26,0:25:66.09:0,66,1247	0/0:33,0:33:43.04:0,43,1319	0/1:13,0:12:56.40:114,0,56	0/1:16,0:16:57.88:122,0,58	0/1:33,0:33:4.34:202,0,4	0/1:19,0:19:72.05:72,0,79	0/1:15,0:14:55.34:77,0,55	0/1:35,0:34:91.43:224,0,91	0/1:19,0:17:78.15:78,0,80	0/1:18,0:17:19.93:307,0,20	0/1:21,0:21:38.26:576,0,38	0/1:9,0:9:42.83:407,0,43
chr10	52184991	.	AAT	A	2354.47	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.079;DP=652;FS=0.543;HRun=0;HaplotypeScore=77.4617;InbreedingCoeff=0.9943;MQ=90.12;MQ0=0;MQRankSum=-0.792;QD=42.04;ReadPosRankSum=1.112;VQSLOD=5.2634;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,105,2096	1/1:0,5:5:15.05:245,15,0	0/0:28,0:28:80.76:0,81,1568	0/0:22,0:22:60.17:0,60,1099	0/0:26,0:26:72.20:0,72,1381	0/0:23,0:23:69.24:0,69,1378	0/0:29,0:29:87.28:0,87,1697	0/0:34,0:34:99:0,99,1985	0/0:21,0:21:63.22:0,63,1257	0/0:20,0:20:60.21:0,60,1218	0/0:21,0:21:63.21:0,63,1214	0/0:16,0:16:48.13:0,48,935	0/0:32,0:32:93.32:0,93,1889	0/0:20,0:20:60.20:0,60,1185	1/1:0,29:29:75.26:1223,75,0	1/1:0,22:22:63.22:1027,63,0	0/0:28,0:28:84.29:0,84,1707	0/0:25,0:25:75.26:0,75,1523	0/0:18,0:18:54.19:0,54,1090	0/0:23,0:23:69.24:0,69,1400	0/0:34,0:34:99:0,99,1940	0/0:22,0:22:54.14:0,54,1042	0/0:13,0:13:36.12:0,36,715	0/0:22,0:22:63.22:0,63,1264	0/0:21,0:21:63.22:0,63,1280	0/0:22,0:22:63.22:0,63,1273	0/0:26,0:26:78.27:0,78,1581	0/0:15,0:15:45.15:0,45,886
chr10	52185172	.	A	AC	2011.01	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-6.292;DP=560;FS=13.042;HRun=3;HaplotypeScore=70.8070;InbreedingCoeff=0.9309;MQ=59.03;MQ0=3;MQRankSum=-0.749;QD=27.18;ReadPosRankSum=-1.970;VQSLOD=1.6608;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,105,1254	1/1:0,3:3:9.03:126,9,0	0/0:24,0:15:45.12:0,45,525	0/0:35,0:29:81.25:0,81,972	0/0:18,0:18:54.17:0,54,648	0/0:14,0:14:39.12:0,39,468	0/0:33,0:33:90.25:0,90,1066	1/1:8,26:31:66.18:892,66,0	0/0:16,0:16:48.13:0,48,564	0/0:18,0:18:51.15:0,51,603	0/0:13,0:13:36.10:0,36,420	0/0:15,0:15:42.11:0,42,492	0/0:14,0:14:39.12:0,39,468	0/0:18,0:18:51.16:0,51,612	1/1:0,24:24:48.16:672,48,0	1/1:1,12:13:3.15:468,3,0	0/0:45,0:45:99:0,129,1531	0/0:18,0:18:54.17:0,54,648	0/0:19,0:19:51.16:0,51,610	0/0:19,0:19:51.16:0,51,610	0/0:25,0:25:66.14:0,66,753	0/0:9,0:9:27.07:0,27,313	0/0:11,0:11:33.10:0,33,395	0/0:29,0:29:81.21:0,81,955	0/0:7,0:7:21.06:0,21,251	0/0:13,0:13:39.11:0,39,458	0/0:25,0:25:75.23:0,75,900	0/0:12,0:12:24.06:0,24,288
chr10	52186047	.	AC	A	5237.53	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=14.937;DP=714;FS=1.110;HRun=2;HaplotypeScore=85.9530;InbreedingCoeff=0.9878;MQ=91.67;MQ0=0;MQRankSum=-2.997;QD=35.39;ReadPosRankSum=0.125;VQSLOD=5.0361;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,99,1482	0/0:8,0:8:24.08:0,24,359	0/0:30,0:31:92.99:0,93,1240	0/0:27,1:28:41.50:0,42,1034	0/0:14,0:14:39.11:0,39,544	0/0:16,0:16:48.15:0,48,699	0/0:30,0:30:87.28:0,87,1283	1/1:1,27:28:81.26:1051,81,0	0/0:26,0:26:78.25:0,78,1149	0/0:29,0:29:87.29:0,87,1287	0/0:18,0:18:54.18:0,54,809	1/1:0,29:29:81.26:1052,81,0	1/1:2,31:33:67.13:1070,67,0	0/0:32,0:32:90.30:0,90,1333	0/0:38,0:38:99:0,111,1642	0/0:39,0:39:99:0,117,1709	0/0:38,0:38:99:0,114,1704	0/0:24,0:24:69.23:0,69,1033	0/0:16,0:16:42.14:0,42,614	0/0:18,0:18:54.18:0,54,806	0/0:51,0:51:99:0,150,2227	1/1:1,15:16:42.14:545,42,0	1/1:0,16:16:45.15:584,45,0	1/1:1,25:26:72.23:935,72,0	0/0:18,0:18:54.17:0,54,787	0/0:23,0:23:69.22:0,69,1015	0/0:32,0:32:96.31:0,96,1414	0/0:3,0:3:9.03:0,9,135
chr10	52186471	.	GC	G	6189.43	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=12.618;DP=642;FS=1.883;HRun=3;HaplotypeScore=65.0460;InbreedingCoeff=0.9927;MQ=82.39;MQ0=0;MQRankSum=-1.903;QD=34.58;ReadPosRankSum=0.881;VQSLOD=5.4033;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,51:54:99:1780,144,0	0/0:7,0:7:21.06:0,21,285	0/0:18,0:18:49.36:0,49,657	0/0:17,0:17:45.12:0,45,593	0/0:30,0:30:90.29:0,90,1277	0/0:22,0:22:60.19:0,60,845	0/0:27,0:27:78.26:0,78,1122	1/1:0,14:14:42.12:506,42,0	0/0:20,0:20:60.20:0,60,864	0/0:20,0:20:54.18:0,54,775	0/0:14,0:14:39.13:0,39,561	0/0:22,0:22:66.22:0,66,950	0/0:20,0:20:57.19:0,57,819	0/0:27,0:27:81.27:0,81,1165	0/0:31,0:31:93.27:0,93,1299	0/0:31,0:31:84.28:0,84,1209	0/0:33,0:33:99:0,99,1404	0/0:31,0:31:93.30:0,93,1320	1/1:0,23:23:69.22:856,69,0	1/1:0,15:15:39.12:484,39,0	1/1:0,39:39:99:1376,111,0	0/0:18,0:18:51.17:0,51,729	0/0:17,0:16:48.15:0,48,672	0/0:28,0:28:78.25:0,78,1103	0/0:9,0:9:27.09:0,27,389	0/0:17,0:17:42.14:0,42,605	1/1:0,34:34:96.30:1189,96,0	0/0:4,0:4:12.04:0,12,173
chr10	52186761	.	A	AT	18852.59	PASS	AB=1.000;AC=49;AF=0.875;AN=56;BaseQRankSum=-10.296;DP=644;FS=2.350;HRun=6;HaplotypeScore=55.8413;InbreedingCoeff=0.9024;MQ=79.85;MQ0=0;MQRankSum=-2.850;QD=32.34;ReadPosRankSum=2.735;VQSLOD=5.3497;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,12:13:30.10:377,30,0	1/1:0,11:11:30.10:377,30,0	0/0:19,0:20:43.82:0,44,406	0/1:12,0:12:2.04:2,0,194	1/1:3,38:41:99:1434,114,0	1/1:1,28:29:84.27:1057,84,0	1/1:2,19:21:54.17:679,54,0	1/1:2,29:31:84.23:1018,84,0	1/1:1,14:15:30.10:377,30,0	1/1:2,20:22:63.20:792,63,0	1/1:0,28:28:81.22:1001,81,0	1/1:3,21:24:54.17:679,54,0	1/1:0,33:34:96.31:1208,96,0	1/1:0,30:31:87.28:1093,87,0	1/1:4,18:22:51.16:642,51,0	1/1:0,18:18:48.15:604,48,0	0/0:21,0:21:57.13:0,57,582	0/0:20,0:20:51.12:0,51,520	1/1:5,29:34:90.29:1132,90,0	1/1:3,24:27:72.19:888,72,0	1/1:4,23:27:66.21:830,66,0	1/1:0,18:18:48.07:568,48,0	1/1:4,13:17:39.12:491,39,0	1/1:0,12:12:33.11:415,33,0	1/1:1,28:29:81.26:1019,81,0	1/1:0,23:23:69.22:867,69,0	1/1:6,31:36:84.23:1038,84,0	1/1:0,7:7:21.07:264,21,0
chr10	52187820	.	A	AC	1320.93	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-7.430;DP=759;FS=2.956;HRun=6;HaplotypeScore=74.7325;InbreedingCoeff=0.9838;MQ=76.09;MQ0=0;MQRankSum=-4.498;QD=24.92;ReadPosRankSum=2.150;VQSLOD=3.8703;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:9,44:53:99:1416,114,0	0/0:14,0:14:33.07:0,33,336	0/0:21,0:21:42.09:0,42,428	0/0:33,0:33:77.83:0,78,765	0/0:38,0:38:92.20:0,92,903	0/0:25,0:25:57.13:0,57,582	0/0:28,0:28:72.12:0,72,724	0/0:24,0:24:63.14:0,63,643	0/0:33,0:33:90.20:0,90,918	0/0:26,0:26:68.36:0,68,679	0/0:17,0:17:45.08:0,45,449	0/0:24,0:24:66.15:0,66,673	0/0:31,0:31:84.18:0,84,857	0/0:20,0:20:54.12:0,54,550	0/0:47,0:47:99:0,132,1337	0/0:34,0:34:81.16:0,81,819	0/0:36,0:36:90.18:0,90,911	0/0:24,0:24:60.13:0,60,612	0/0:18,0:18:39.08:0,39,398	0/0:25,0:25:66.14:0,66,672	0/0:26,0:26:69.15:0,69,703	0/0:26,0:26:72.12:0,72,723	0/0:17,0:17:33.05:0,33,329	0/0:25,0:25:51.11:0,51,520	0/0:31,0:31:84.19:0,84,855	0/0:32,0:32:78.16:0,78,795	0/0:26,0:26:69.15:0,69,703	0/0:5,0:5:15.03:0,15,153
chr10	52187914	.	AC	A	24059.65	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=8.958;DP=879;FS=3.887;HRun=2;HaplotypeScore=90.7532;InbreedingCoeff=0.9996;MQ=88.16;MQ0=0;MQRankSum=-6.795;QD=35.38;ReadPosRankSum=4.421;VQSLOD=5.2340;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,147,2182	1/1:0,10:10:27.09:351,27,0	0/0:41,0:41:99:0,117,1705	0/0:31,0:30:86.18:0,86,1132	1/1:0,25:25:66.21:857,66,0	1/1:1,16:17:45.15:584,45,0	1/1:1,35:36:87.28:1124,87,0	1/1:3,40:43:99:1504,117,0	1/1:1,37:38:99:1441,111,0	1/1:1,34:35:99:1324,102,0	1/1:1,17:18:45.15:584,45,0	1/1:1,34:35:96.31:1246,96,0	1/1:2,24:26:69.22:896,69,0	1/1:0,32:32:87.28:1130,87,0	1/1:2,37:39:99:1363,105,0	1/1:0,47:47:99:1714,132,0	0/0:44,0:44:99:0,132,1918	0/0:30,0:30:90.30:0,90,1345	1/1:2,19:21:57.14:708,57,0	1/1:1,21:22:60.19:779,60,0	1/1:0,53:53:99:1909,147,0	1/1:1,28:29:75.24:974,75,0	1/1:0,24:24:66.21:857,66,0	1/1:2,35:37:93.30:1208,93,0	1/1:0,26:26:75.24:974,75,0	1/1:0,29:29:87.28:1130,87,0	1/1:0,28:28:78.25:1013,78,0	1/1:0,10:10:30.10:389,30,0
chr10	52189093	.	CAGAGACT	C	964.96	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.322;DP=729;FS=6.960;HRun=0;HaplotypeScore=163.6980;InbreedingCoeff=0.9379;MQ=82.11;MQ0=0;MQRankSum=-5.137;QD=41.95;ReadPosRankSum=-3.070;VQSLOD=2.5065;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,18:23:42.14:1060,42,0	0/0:6,0:6:18.06:0,18,714	0/0:22,0:21:33.56:0,34,1708	0/0:19,0:19:42.66:0,43,1651	0/0:21,0:21:57.20:0,57,2242	0/0:15,0:15:42.14:0,42,1600	0/0:27,0:27:72.25:0,72,2728	0/0:30,0:30:72.25:0,72,2563	0/0:33,0:33:93.31:0,93,3499	0/0:29,0:29:78.27:0,78,3069	0/0:19,0:19:48.16:0,48,1879	0/0:39,0:39:99:0,102,3759	0/0:34,0:34:96.33:0,96,3549	0/0:37,0:37:99:0,105,4165	0/0:45,0:45:99:0,132,5118	0/0:37,0:37:99:0,111,4275	0/0:29,0:29:87.30:0,87,3270	0/0:16,0:16:48.16:0,48,1784	0/0:18,0:18:48.16:0,48,1732	0/0:25,0:25:72.25:0,72,2640	0/0:30,0:30:84.29:0,84,3134	0/0:24,0:24:63.22:0,63,2441	0/0:24,0:24:60.21:0,60,2299	0/0:34,0:34:93.32:0,93,3645	0/0:27,0:27:75.26:0,75,2945	0/0:33,0:33:87.30:0,87,3446	0/0:29,0:29:81.28:0,81,3135	0/0:4,0:4:9.03:0,9,357
chr10	52189465	.	G	GTC	1234.47	PASS	AB=1.000;AC=10;AF=0.179;AN=56;BaseQRankSum=-3.636;DP=586;FS=5.255;HRun=0;HaplotypeScore=188.2587;InbreedingCoeff=0.5098;MQ=86.02;MQ0=5;MQRankSum=-2.850;QD=7.39;ReadPosRankSum=0.555;VQSLOD=2.7212;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:43.85:0,44,413	1/1:5,8:13:27.09:433,27,0	0/1:46,0:35:20.08:20,0,119	0/1:53,0:33:33.74:34,0,106	0/0:39,0:39:87.77:0,88,745	0/0:21,0:21:44.79:0,45,371	0/0:13,0:13:23.78:0,24,182	0/0:34,0:34:62.84:0,63,535	0/0:19,0:18:32.77:0,33,260	0/0:21,0:21:11.83:0,12,244	0/0:15,0:15:29.97:0,30,258	0/0:26,0:26:62.48:0,62,471	0/0:13,0:13:26.92:0,27,217	0/0:15,0:15:29.92:0,30,247	1/1:7,5:12:21.07:330,21,0	1/1:3,12:15:36.11:557,36,0	0/0:21,0:21:56.91:0,57,483	0/0:12,0:11:23.65:0,24,190	0/1:9,0:9:13.66:14,0,68	0/0:24,0:24:47.79:0,48,398	0/0:25,0:25:44.32:0,44,372	0/0:6,0:6:14.87:0,15,122	0/1:16,0:16:7.56:8,0,146	0/0:16,0:16:30.44:0,30,256	0/0:18,0:18:35.93:0,36,296	0/0:15,0:15:32.63:0,33,249	0/0:26,0:26:47.91:0,48,398	0/0:8,0:8:8.99:0,9,78
chr10	52189490	.	TGGG	T	13322.94	PASS	AB=0.953;AC=53;AF=0.946;AN=56;BaseQRankSum=-7.692;DP=574;FS=4.770;HRun=3;HaplotypeScore=180.3193;InbreedingCoeff=-0.0561;MQ=80.73;MQ0=4;MQRankSum=-5.665;QD=23.21;ReadPosRankSum=6.082;VQSLOD=2.1846;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:30,2:32:83.11:1004,83,0	1/1:14,0:14:39.12:480,39,0	0/1:58,1:37:55.49:55,0,730	0/1:57,1:32:99:177,0,669	1/1:36,0:36:68.25:994,68,0	1/1:19,0:19:45.12:505,45,0	1/1:13,0:13:36.10:416,36,0	1/1:21,0:21:42.18:694,42,0	1/1:14,1:15:42.12:505,42,0	1/1:20,0:20:57:664,57,0	1/1:18,0:18:45.13:545,45,0	1/1:20,0:20:57.15:624,57,0	1/1:11,0:11:27.08:313,27,0	1/1:13,0:13:33.09:364,33,0	1/1:10,1:11:3.10:271,3,0	1/1:15,0:15:39.10:469,39,0	1/1:22,0:22:51.14:585,51,0	1/1:9,0:8:18.06:225,18,0	0/1:9,0:10:1.93:220,0,2	1/1:23,0:23:54.16:648,54,0	1/1:26,0:26:66.18:755,66,0	1/1:9,0:9:27.08:327,27,0	1/1:17,0:17:33.56:375,34,0	1/1:20,0:20:33.42:365,33,0	1/1:16,0:16:39.09:415,39,0	1/1:17,0:17:51.12:574,51,0	1/1:18,0:18:29.15:554,29,0	1/1:9,0:9:18.05:201,18,0
chr10	52189491	.	GGGC	G	21483.65	PASS	AB=0.922;AC=54;AF=0.964;AN=56;BaseQRankSum=-9.907;DP=559;FS=1.365;HRun=0;HaplotypeScore=147.6748;InbreedingCoeff=-0.0380;MQ=80.85;MQ0=4;MQRankSum=-5.428;QD=38.43;ReadPosRankSum=5.018;VQSLOD=5.9697;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,27:31:87.27:1561,87,0	1/1:0,13:13:39.13:726,39,0	0/1:54,4:35:85.77:86,0,765	0/1:53,6:32:99:253,0,635	1/1:0,34:34:90.31:1676,90,0	1/1:0,19:19:45.15:838,45,0	1/1:0,13:13:36.12:670,36,0	1/1:0,20:20:60.21:1104,60,0	1/1:1,14:15:42.14:768,42,0	1/1:0,20:20:57.07:1051,57,0	1/1:0,18:18:45.15:837,45,0	1/1:0,20:20:57.20:1062,57,0	1/1:0,10:10:27.09:503,27,0	1/1:0,13:13:33.11:615,33,0	1/1:2,9:11:24.08:447,24,0	1/1:1,13:14:39.13:714,39,0	1/1:1,21:22:51.17:949,51,0	1/1:1,7:7:18.06:331,18,0	1/1:1,8:9:21.07:391,21,0	1/1:0,23:23:54.19:996,54,0	1/1:0,25:25:66.23:1229,66,0	1/1:0,9:9:27.09:502,27,0	1/1:1,15:16:33.58:606,34,0	1/1:0,20:20:33.44:616,33,0	1/1:0,15:15:39.13:727,39,0	1/1:0,17:17:51.17:942,51,0	1/1:0,17:17:51.17:950,51,0	1/1:0,9:9:18.06:332,18,0
chr10	52189648	.	TA	T	4002.94	PASS	AB=0.772;AC=46;AF=0.821;AN=56;BaseQRankSum=2.640;DP=649;FS=0.524;HRun=15;HaplotypeScore=118.0933;InbreedingCoeff=0.5160;MQ=83.11;MQ0=1;MQRankSum=1.657;QD=7.10;ReadPosRankSum=5.100;VQSLOD=2.6200;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,2:43:64.93:209,65,0	1/1:0,1:11:19.24:66,19,0	0/0:29,1:26:15.58:0,16,125	0/1:25,0:22:6.13:6,0,24	1/1:13,18:33:7.37:285,7,0	1/1:2,17:20:49.68:326,50,0	1/1:1,9:11:22.73:140,23,0	0/0:29,0:34:63.59:0,64,376	1/1:3,10:13:20.61:134,21,0	1/1:12,13:26:16.91:225,17,0	1/1:10,20:32:27.82:293,28,0	1/1:8,15:24:8.08:171,8,0	1/1:6,13:22:26.63:164,27,0	1/1:7,13:22:23.09:239,23,0	1/1:6,0:24:28.49:82,28,0	1/1:7,0:24:32.52:94,33,0	0/0:16,3:20:13.57:0,14,232	0/1:14,3:17:21.86:22,0,188	1/1:3,0:17:24.14:68,24,0	1/1:10,0:29:28.34:82,28,0	1/1:5,0:14:14.22:41,14,0	0/1:5,7:14:6.68:82,0,7	0/1:7,9:17:27.07:95,0,27	1/1:6,15:22:19.97:248,20,0	1/1:5,15:21:46.33:294,46,0	1/1:8,24:33:63.89:409,64,0	1/1:7,0:29:34.45:100,34,0	1/1:1,1:21:39.61:125,40,0
chr10	52190588	.	C	CAT	1549.81	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.258;DP=747;FS=1.547;HRun=0;HaplotypeScore=91.7602;InbreedingCoeff=0.9994;MQ=83.87;MQ0=0;MQRankSum=-3.006;QD=55.35;ReadPosRankSum=1.198;VQSLOD=3.9265;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,28:28:81.28:1645,81,0	0/0:10,0:10:30.10:0,30,489	0/0:28,0:28:77.76:0,78,1208	0/0:19,0:19:44.96:0,45,693	0/0:15,0:15:42.14:0,42,684	0/0:35,0:35:99:0,99,1564	0/0:20,0:20:60.20:0,60,978	0/0:32,0:32:93.32:0,93,1516	0/0:29,0:29:81.28:0,81,1320	0/0:29,0:29:84.29:0,84,1370	0/0:22,0:22:63.21:0,63,1026	0/0:37,0:37:99:0,111,1735	0/0:32,0:32:90.27:0,90,1417	0/0:30,0:30:90.28:0,90,1420	0/0:36,0:36:99:0,102,1564	0/0:34,0:34:99:0,102,1637	0/0:25,0:25:75.24:0,75,1195	0/0:20,0:20:54.16:0,54,854	0/0:17,0:17:51.17:0,51,808	0/0:30,0:30:90.30:0,90,1440	0/0:41,0:41:99:0,120,1881	0/0:20,0:20:57.17:0,57,884	0/0:22,0:22:60.18:0,60,925	0/0:39,0:39:99:0,114,1808	0/0:20,0:20:60.19:0,60,954	0/0:32,0:32:87.29:0,87,1394	0/0:28,0:28:80.45:0,80,1221	0/0:17,0:17:51.11:0,51,755
chr10	52191852	.	TAG	T	1511.79	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.501;DP=731;FS=4.121;HRun=0;HaplotypeScore=83.8562;InbreedingCoeff=0.8507;MQ=80.27;MQ0=0;MQRankSum=-7.015;QD=34.36;ReadPosRankSum=3.212;VQSLOD=6.1165;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,44:44:99:1607,105,0	0/0:11,0:11:33.10:0,33,604	0/0:18,0:18:51.17:0,51,974	0/0:23,0:23:66.05:0,66,1160	0/0:29,0:29:87.30:0,87,1669	0/0:17,0:17:51.17:0,51,966	0/0:19,0:19:57.18:0,57,1068	0/0:43,0:43:99:0,126,2404	0/0:28,0:28:84.29:0,84,1575	0/0:35,0:35:99:0,105,2022	0/0:26,0:26:78.27:0,78,1479	0/0:23,0:23:66.23:0,66,1242	0/0:37,0:37:99:0,108,2073	0/0:35,0:35:99:0,105,1983	0/0:29,0:29:87.30:0,87,1643	0/0:34,0:34:99:0,102,1941	0/0:31,0:31:90.31:0,90,1707	0/0:17,0:17:51.12:0,51,905	0/0:20,0:20:60.20:0,60,1129	0/0:32,0:32:96.33:0,96,1830	0/0:37,0:37:99:0,111,2029	0/0:25,0:25:75.24:0,75,1406	0/0:22,0:22:66.23:0,66,1265	0/0:20,0:20:60.21:0,60,1150	0/0:26,0:26:78.27:0,78,1506	0/0:31,0:31:93.31:0,93,1751	0/0:18,0:18:54.17:0,54,978	0/0:1,0:1:3.01:0,3,58
chr10	52192425	.	C	CGGA	4749.59	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-11.174;DP=674;FS=0.475;HRun=0;HaplotypeScore=93.6466;InbreedingCoeff=0.9998;MQ=89.39;MQ0=0;MQRankSum=-1.786;QD=65.06;ReadPosRankSum=5.239;VQSLOD=6.3428;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:69.24:0,69,1274	1/1:0,16:17:45.15:1108,45,0	0/0:29,0:29:87.19:0,87,1525	0/0:22,0:22:57.20:0,57,1059	0/0:32,0:32:93.31:0,93,1678	0/0:31,0:31:93.32:0,93,1734	0/0:20,0:20:60.21:0,60,1119	0/0:29,0:29:84.28:0,84,1519	0/0:14,0:14:39.12:0,39,690	0/0:32,0:32:96.32:0,96,1748	0/0:30,0:30:84.26:0,84,1498	0/0:26,0:26:78.26:0,78,1423	0/0:26,0:26:78.25:0,78,1424	0/0:15,0:15:45.15:0,45,830	1/1:0,28:31:78.27:1922,78,0	1/1:1,23:25:72.20:1720,72,0	0/0:19,0:19:57.16:0,57,1020	0/0:12,0:12:30.57:0,31,560	0/0:20,0:20:60.19:0,60,1089	0/0:37,0:37:99:0,108,1975	0/0:30,0:30:90.31:0,90,1671	0/0:19,0:19:57.17:0,57,1001	0/0:25,0:25:72.20:0,72,1305	0/0:15,0:15:45.15:0,45,810	0/0:14,0:14:42.14:0,42,783	0/0:28,0:28:81.28:0,81,1510	0/0:38,0:38:99:0,111,2067	0/0:14,0:14:42.14:0,42,783
chr10	52194059	.	A	AC	464.30	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.658;DP=548;FS=8.471;HRun=1;HaplotypeScore=54.0172;InbreedingCoeff=0.8967;MQ=84.21;MQ0=0;MQRankSum=-0.486;QD=18.57;ReadPosRankSum=0.578;VQSLOD=3.1405;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,24:25:47.07:559,47,0	0/0:10,0:10:27.05:0,27,333	0/0:28,0:28:60.50:0,61,930	0/0:19,0:18:32.44:0,32,537	0/0:16,0:16:36.12:0,36,465	0/0:8,0:8:18.06:0,18,232	0/0:16,0:16:45.15:0,45,583	0/0:35,0:35:96.17:0,96,1192	0/0:23,0:23:69.22:0,69,895	0/0:23,0:22:69.09:0,69,839	0/0:18,0:18:51.17:0,51,660	0/0:15,0:15:45.13:0,45,559	0/0:21,0:21:60.19:0,60,774	0/0:18,0:18:54.18:0,54,699	0/0:21,0:21:63.20:0,63,814	0/0:25,0:25:75.24:0,75,971	0/0:35,0:35:96.21:0,96,1186	0/0:20,0:20:54.18:0,54,700	0/0:17,0:17:48.13:0,48,586	0/0:26,0:26:78.24:0,78,997	0/0:9,0:9:27.09:0,27,350	0/0:18,0:18:54.17:0,54,696	0/0:18,0:18:51.15:0,51,648	0/0:19,0:19:54.15:0,54,684	0/0:16,0:16:48.14:0,48,605	0/0:18,0:17:54.18:0,54,701	0/0:29,0:29:87.27:0,87,1115	0/0:2,0:2:6.02:0,6,78
chr10	52195485	.	A	ACCT	1086.39	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.038;DP=611;FS=8.894;HRun=0;HaplotypeScore=85.2152;InbreedingCoeff=0.9909;MQ=92.32;MQ0=0;MQRankSum=-3.799;QD=60.35;ReadPosRankSum=1.596;VQSLOD=5.0103;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,18:18:48.16:1181,48,0	0/0:9,0:9:27.05:0,27,439	0/0:22,0:22:63.07:0,63,1080	0/0:29,0:29:81.24:0,81,1405	0/0:30,0:30:87.28:0,87,1590	0/0:26,0:26:78.23:0,78,1361	0/0:22,0:22:66.20:0,66,1135	0/0:32,0:32:93.29:0,93,1608	0/0:14,0:14:39.13:0,39,727	0/0:30,0:30:87.29:0,87,1596	0/0:15,0:15:45.13:0,45,767	0/0:16,0:16:48.16:0,48,894	0/0:24,0:24:69.23:0,69,1247	0/0:21,0:21:63.22:0,63,1173	0/0:28,0:28:84.29:0,84,1564	0/0:30,0:30:87.30:0,87,1621	0/0:17,0:17:51.15:0,51,909	0/0:19,0:19:54.15:0,54,969	0/0:17,0:17:51.16:0,51,888	0/0:18,0:18:54.13:0,54,911	0/0:21,0:21:60.21:0,60,1111	0/0:24,0:24:72.24:0,72,1311	0/0:16,0:16:48.15:0,48,831	0/0:26,0:26:78.25:0,78,1394	0/0:24,0:24:69.22:0,69,1222	0/0:22,0:22:66.21:0,66,1164	0/0:35,0:33:99:0,102,1834	0/0:6,0:6:18.05:0,18,303
chr10	52195876	.	TCACACACA	T	108.22	PASS	AC=4;AF=0.077;AN=52;BaseQRankSum=0.378;DP=469;FS=0.000;HRun=0;HaplotypeScore=125.2846;InbreedingCoeff=0.6499;MQ=69.96;MQ0=17;MQRankSum=1.018;QD=3.86;ReadPosRankSum=-0.169;VQSLOD=2.1607;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	1/1:5,0:10:6.02:133,6,0	0/0:34,0:19:5.84:0,6,34	0/0:30,0:21:8.96:0,9,191	0/0:17,0:17:15.05:0,15,460	0/0:30,0:30:34.06:0,34,1071	0/0:21,0:20:18.06:0,18,594	0/0:18,0:18:12.02:0,12,96	0/0:16,0:16:27.93:0,28,742	0/0:17,0:17:39.13:0,39,1342	0/0:15,0:15:12.04:0,12,377	0/0:18,0:18:30.95:0,31,578	0/0:12,0:11:14.94:0,15,434	0/0:20,0:20:18.06:0,18,583	./.	1/1:12,6:17:3.01:72,3,0	0/0:17,0:17:36.08:0,36,1106	0/0:10,0:10:24.08:0,24,673	0/0:6,0:5:9.03:0,9,264	0/0:13,0:12:18.04:0,18,433	0/0:11,0:9:9.03:0,9,194	0/0:14,0:13:15.05:0,15,512	0/0:16,0:16:18.06:0,18,621	0/0:21,0:20:18.06:0,18,455	0/0:22,0:22:31.64:0,32,951	0/0:16,0:16:33.10:0,33,941	0/0:16,0:15:27.07:0,27,653	0/0:7,0:7:18.06:0,18,555
chr10	52196185	.	C	CA	1013.07	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-5.830;DP=629;FS=2.487;HRun=4;HaplotypeScore=68.3336;InbreedingCoeff=0.9998;MQ=88.37;MQ0=0;MQRankSum=-2.320;QD=34.93;ReadPosRankSum=0.980;VQSLOD=4.3117;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,28:29:81.27:1108,81,0	0/0:14,0:14:39.11:0,39,442	0/0:22,0:22:54.12:0,54,593	0/0:25,0:26:48.44:0,48,591	0/0:18,0:18:54.15:0,54,612	0/0:22,0:22:63.16:0,63,704	0/0:22,0:22:66.19:0,66,749	0/0:37,0:37:99:0,102,1150	0/0:23,0:23:66.16:0,66,729	0/0:25,0:25:75.19:0,75,837	0/0:19,0:19:54.14:0,54,604	0/0:21,0:21:57.16:0,57,646	0/0:25,0:25:69.18:0,69,772	0/0:22,0:22:60.16:0,60,670	0/0:33,0:33:90.24:0,90,1011	0/0:23,0:23:66.17:0,66,739	0/0:23,0:23:60.15:0,60,669	0/0:14,0:14:39.11:0,39,442	0/0:18,0:18:51.15:0,51,579	0/0:17,0:17:48.12:0,48,535	0/0:27,0:27:72.20:0,72,817	0/0:23,0:23:57.63:0,58,648	0/0:23,0:23:57.16:0,57,646	0/0:19,0:19:54.13:0,54,600	0/0:22,0:22:60.17:0,60,681	0/0:17,0:17:51.15:0,51,578	0/0:28,0:28:81.23:0,81,919	0/0:17,0:17:51.15:0,51,578
chr10	52197123	.	TGTGTGAGAGAGAGAGAGA	T	1757.85	PASS	AB=1.000;AC=20;AF=0.400;AN=50;BaseQRankSum=1.111;DP=392;FS=3.780;HRun=0;HaplotypeScore=201.2222;InbreedingCoeff=0.4082;MQ=31.77;MQ0=29;MQRankSum=0.397;QD=9.01;ReadPosRankSum=-0.370;VQSLOD=2.5682;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:19:3.01:0,3,78	0/1:9,0:9:45.65:46,0,444	./.	./.	0/0:20,0:20:6.79:0,7,138	0/1:16,0:15:5.20:189,0,5	1/1:15,0:11:2.66:44,3,0	0/0:10,0:7:11.53:0,12,184	0/0:10,0:10:0.47:0,0,1	1/1:12,0:12:28.16:446,28,0	1/1:5,21:25:6.02:206,6,0	0/0:23,0:21:16.89:0,17,196	0/0:9,0:9:9.87:0,10,161	1/1:11,0:10:8.32:78,8,0	0/0:15,0:14:1.55:0,2,4	0/1:19,0:18:66.76:67,0,291	0/0:9,0:9:14.98:0,15,373	0/0:8,0:7:21.07:0,21,593	0/0:12,0:9:21.03:0,21,368	0/1:20,0:20:95:153,0,95	0/0:12,0:10:0:0,0,0	1/1:24,0:20:1.36:2,1,0	0/0:17,0:15:0.47:0,0,1	./.	1/1:13,0:13:12.04:177,12,0	1/1:12,12:22:13.45:450,13,0	0/0:18,0:17:5.89:0,6,357	1/1:6,0:3:5.95:56,6,0
chr10	52197127	.	TGAGAGAGAGAGAGA	T	903.83	PASS	AB=0.964;AC=14;AF=0.292;AN=48;BaseQRankSum=1.737;DP=390;FS=44.420;HRun=0;HaplotypeScore=186.9082;InbreedingCoeff=0.2753;MQ=32.30;MQ0=27;MQRankSum=0.225;QD=5.41;ReadPosRankSum=-2.051;VQSLOD=0.8249;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:21:3.01:0,3,78	0/0:9,0:9:11.75:0,12,450	./.	./.	1/1:16,3:20:7.53:42,8,0	0/1:13,0:12:14.98:105,0,15	0/0:15,0:11:0:0,0,0	0/0:15,0:12:26.95:0,27,757	./.	0/1:10,2:12:27.85:273,0,28	1/1:23,0:25:5.38:122,5,0	0/0:16,0:18:4.37:0,4,22	0/0:8,0:8:0.10:0,0,13	0/0:9,0:8:5.50:0,6,39	0/0:17,0:16:4.57:0,5,130	0/0:22,0:21:18.36:0,18,317	0/0:8,0:8:14.98:0,15,302	0/0:9,0:8:20.86:0,21,437	0/0:11,0:8:5.95:0,6,42	1/1:19,0:19:12.99:172,13,0	0/0:13,0:11:0:0,0,0	1/1:12,0:19:0.89:2,1,0	0/0:12,1:15:0.47:0,0,1	./.	1/1:8,6:15:6.71:34,7,0	0/1:23,0:21:31.99:229,0,32	0/1:17,0:16:59.68:62,0,60	0/0:6,0:3:3.43:0,3,20
chr10	52197605	.	T	TA	1028.50	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.213;DP=641;FS=0.000;HRun=7;HaplotypeScore=63.1966;InbreedingCoeff=0.9993;MQ=85.18;MQ0=0;MQRankSum=-4.698;QD=32.14;ReadPosRankSum=1.058;VQSLOD=3.3979;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,32:32:93.29:1123,93,0	0/0:15,0:15:45.04:0,45,427	0/0:20,0:20:50.96:0,51,471	0/0:20,0:20:45.05:0,45,428	0/0:31,0:31:84.13:0,84,807	0/0:20,0:20:54.07:0,54,515	0/0:17,0:17:45.07:0,45,435	0/0:27,0:27:69.08:0,69,658	0/0:22,0:22:63.10:0,63,608	0/0:23,0:23:60.04:0,60,563	0/0:30,0:30:84.08:0,84,792	0/0:15,0:15:39.06:0,39,377	0/0:17,0:17:48.08:0,48,463	0/0:20,0:20:57.07:0,57,540	0/0:23,0:23:66.11:0,66,637	0/0:16,0:16:45.06:0,45,429	0/0:19,0:19:47.99:0,48,446	0/0:11,0:11:33.04:0,33,312	0/0:25,0:25:69.10:0,69,661	0/0:37,0:37:99:0,108,1037	0/0:19,0:19:57.07:0,57,543	0/0:28,0:28:78.11:0,78,749	0/0:39,0:39:99:0,102,985	0/0:13,0:13:33.05:0,33,319	0/0:27,0:27:72.10:0,72,690	0/0:27,0:27:75.10:0,75,718	0/0:35,0:35:96.14:0,96,920	0/0:13,0:13:39.06:0,39,377
chr10	52199469	.	GCTCTCTCTCTCT	G	1910.39	PASS	AB=0.933;AC=31;AF=0.646;AN=48;BaseQRankSum=-0.580;DP=604;FS=33.219;HRun=0;HaplotypeScore=224.2165;InbreedingCoeff=0.1979;MQ=64.03;MQ0=22;MQRankSum=-0.216;QD=4.94;ReadPosRankSum=3.958;VQSLOD=1.0543;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:25:6.85:98,7,0	1/1:7,3:11:6.02:200,6,0	./.	./.	0/1:15,0:17:0:0,0,0	1/1:18,1:19:6:97,6,0	./.	0/0:34,0:33:6.01:0,6,70	1/1:20,0:20:2.99:24,3,0	1/1:18,1:19:5.83:123,6,0	1/1:17,0:17:5.74:142,6,0	1/1:16,0:18:2.03:5,2,0	1/1:24,1:25:16.90:267,17,0	0/0:18,0:18:1.78:0,2,5	1/1:26,2:30:2.71:71,3,0	1/1:19,1:27:9.50:296,10,0	0/0:15,0:15:6.01:0,6,96	0/1:5,0:5:10.22:10,0,58	0/0:26,0:26:19.78:0,20,416	0/1:28,0:30:3.52:4,0,214	0/1:21,0:20:49.36:49,0,154	1/1:9,1:14:2.65:39,3,0	./.	1/1:17,0:17:2.68:11,3,0	0/1:14,0:15:0:0,0,0	0/1:20,0:23:99:425,0,113	0/1:28,1:28:99:185,0,379	0/0:3,0:3:1.25:0,1,3
chr10	52199514	.	C	CTG	304.96	PASS	AB=1.000;AC=20;AF=0.370;AN=54;BaseQRankSum=5.145;DP=605;FS=7.905;HRun=0;HaplotypeScore=181.7039;InbreedingCoeff=0.5558;MQ=36.03;MQ0=54;MQRankSum=-2.283;QD=1.34;ReadPosRankSum=-1.391;VQSLOD=1.9589;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:27:15.39:0,15,242	0/0:16,0:16:25.30:0,25,134	0/0:15,0:7:14.80:0,15,98	./.	0/1:22,0:19:0:0,0,0	1/1:23,0:20:9.31:58,9,0	1/1:20,0:14:0.47:1,0,0	0/0:35,0:27:75.95:0,76,508	1/1:6,13:18:0.47:1,0,0	0/1:12,0:9:13.72:14,0,88	1/1:16,0:15:6.45:48,6,0	1/1:30,0:25:8.44:53,8,0	1/1:16,0:16:16.93:99,17,0	1/1:15,0:13:2.15:17,2,0	0/0:36,0:35:13.57:0,14,126	0/0:27,0:26:26.29:0,26,135	0/0:23,0:20:39.83:0,40,305	0/0:7,0:7:20.67:0,21,151	0/0:19,0:19:47.85:0,48,406	0/0:30,0:29:58.61:0,59,454	0/0:30,0:27:26.81:0,27,304	1/1:23,0:20:0.42:1,0,0	0/0:16,0:15:0:0,0,0	0/1:15,0:15:0:0,0,0	0/0:24,0:21:2.96:0,3,20	0/1:17,0:16:34.69:162,0,35	0/0:38,0:33:64.29:0,64,647	0/0:11,0:8:9.91:0,10,48
chr10	52199524	.	C	CTGTGTGTGTGTGTG	9183.69	PASS	AB=0.958;AC=39;AF=0.696;AN=56;BaseQRankSum=-4.360;DP=750;FS=2.779;HRun=0;HaplotypeScore=289.2426;InbreedingCoeff=0.3105;MQ=35.50;MQ0=48;MQRankSum=-0.189;QD=15.28;ReadPosRankSum=-3.762;VQSLOD=2.6534;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:32,0:27:42.35:254,0,42	1/1:17,0:17:21.07:433,21,0	0/0:41,0:9:26.73:0,27,563	0/0:47,0:5:5.89:0,6,52	1/1:31,0:30:7.89:227,8,0	1/1:29,0:26:13.27:422,13,0	1/1:29,0:24:4.63:236,5,0	0/1:37,0:31:71.77:232,0,72	1/1:22,0:21:9.02:254,9,0	1/1:19,0:16:30.06:1042,30,0	1/1:17,0:16:2.91:50,3,0	1/1:35,0:31:22.59:638,23,0	1/1:18,0:18:26.68:901,27,0	1/1:20,0:19:15.02:331,15,0	1/1:38,0:37:32.64:791,33,0	1/1:31,0:30:30.04:628,30,0	0/0:24,0:21:39.13:0,39,1323	0/0:8,0:8:8.92:0,9,194	0/1:22,0:22:17.30:329,0,17	0/1:28,0:27:17.79:18,0,168	0/0:29,0:27:2.80:0,3,214	1/1:26,0:24:6.01:97,6,0	1/1:23,0:22:6.02:191,6,0	0/1:14,9:24:0.14:0,0,0	0/1:27,0:25:84.21:187,0,84	1/1:19,0:19:44.25:1441,44,0	0/1:41,0:39:99:128,0,185	1/1:15,0:12:14.08:356,14,0
chr10	52201816	.	G	GT	16472.12	PASS	AC=52;AF=1.000;AN=52;DP=537;FS=0.000;HRun=2;HaplotypeScore=585.5089;InbreedingCoeff=-0.0076;MQ=28.87;MQ0=0;QD=30.73;VQSLOD=-0.2550;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,12:15:36.03:451,36,0	1/1:2,9:11:27.05:347,27,0	./.	./.	1/1:5,20:25:44.55:503,45,0	1/1:4,22:25:66.22:912,66,0	1/1:5,19:24:57.19:784,57,0	1/1:11,21:32:69.19:932,69,0	1/1:6,20:26:57.19:785,57,0	1/1:8,19:27:62.98:813,63,0	1/1:5,23:28:68.94:780,69,0	1/1:3,29:32:87.29:1199,87,0	1/1:5,15:20:54.13:703,54,0	1/1:3,19:22:57.19:778,57,0	1/1:10,14:24:50.99:634,51,0	1/1:5,17:22:54.04:716,54,0	1/1:4,11:15:30.10:409,30,0	1/1:2,5:7:15.05:208,15,0	1/1:7,9:16:30.07:398,30,0	1/1:5,16:21:54.03:690,54,0	1/1:1,7:8:14.75:185,15,0	1/1:4,19:23:60.02:723,60,0	1/1:5,17:22:53.75:641,54,0	1/1:1,10:11:23.87:295,24,0	1/1:4,17:21:51.17:703,51,0	1/1:7,20:27:69.16:913,69,0	1/1:9,21:30:69.20:928,69,0	1/1:0,1:1:3.01:42,3,0
chr10	52201823	.	AT	A	17511.16	PASS	AC=52;AF=1.000;AN=52;BaseQRankSum=2.404;DP=476;FS=2.942;HRun=1;HaplotypeScore=521.8088;InbreedingCoeff=-0.0079;MQ=28.91;MQ0=0;MQRankSum=-0.145;QD=36.87;ReadPosRankSum=0.522;VQSLOD=0.7614;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,13:13:33.11:453,33,0	1/1:0,9:9:24.08:329,24,0	./.	./.	1/1:0,21:21:39.13:533,39,0	1/1:0,25:25:69.23:951,69,0	1/1:0,19:19:57.19:783,57,0	1/1:0,23:23:62.90:911,63,0	1/1:0,22:22:63.21:867,63,0	1/1:0,24:24:69.22:941,69,0	1/1:1,23:24:51.14:672,51,0	1/1:0,30:30:90.30:1236,90,0	1/1:0,19:19:57.19:782,57,0	1/1:0,20:20:57.19:779,57,0	1/1:0,18:18:54.18:741,54,0	1/1:0,19:19:57.19:786,57,0	1/1:1,13:14:36.11:494,36,0	1/1:0,6:6:18.06:251,18,0	1/1:0,12:12:36.12:503,36,0	1/1:0,20:20:57.19:780,57,0	1/1:1,8:9:12.03:165,12,0	1/1:0,22:22:54.18:735,54,0	1/1:1,21:22:28.70:633,29,0	1/1:1,13:14:25.32:326,25,0	1/1:0,18:18:54.18:743,54,0	1/1:0,27:27:81.23:1102,81,0	1/1:0,24:24:72.20:973,72,0	1/1:0,1:1:3.01:41,3,0
chr10	52202906	.	C	CA	1392.02	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-7.428;DP=744;FS=1.421;HRun=1;HaplotypeScore=70.0808;InbreedingCoeff=0.9958;MQ=77.07;MQ0=0;MQRankSum=-2.242;QD=38.67;ReadPosRankSum=-1.416;VQSLOD=3.6880;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,36:36:93.32:1487,93,0	0/0:16,0:16:45.14:0,45,612	0/0:22,0:22:53.24:0,53,627	0/0:8,0:8:21.02:0,21,239	0/0:30,0:30:84.24:0,84,1152	0/0:29,0:29:87.28:0,87,1194	0/0:28,0:28:78.18:0,78,1032	0/0:34,0:34:90.20:0,90,1175	0/0:32,0:32:93.31:0,93,1296	0/0:29,0:29:87.29:0,87,1216	0/0:14,0:14:39.13:0,39,545	0/0:33,0:33:96.32:0,96,1342	0/0:33,0:33:96.31:0,96,1320	0/0:28,0:28:81.27:0,81,1132	0/0:39,0:39:99:0,117,1617	0/0:25,0:25:75.20:0,75,1010	0/0:21,0:21:58.18:0,58,793	0/0:22,0:22:63.21:0,63,881	0/0:32,0:32:93.30:0,93,1280	0/0:17,0:17:45.15:0,45,627	0/0:35,0:35:99:0,99,1381	0/0:20,0:20:60.20:0,60,839	0/0:17,0:17:51.17:0,51,703	0/0:40,0:40:99:0,114,1527	0/0:16,0:16:45.15:0,45,628	0/0:30,0:30:84.28:0,84,1172	0/0:37,0:36:99:0,102,1400	0/0:21,0:21:63.21:0,63,880
chr10	52204466	.	A	AT	16315.03	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=-17.458;DP=751;FS=14.520;HRun=3;HaplotypeScore=66.4345;InbreedingCoeff=0.9998;MQ=82.61;MQ0=0;MQRankSum=-2.514;QD=36.02;ReadPosRankSum=3.460;VQSLOD=4.1143;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,42:44:99:1638,117,0	1/1:1,11:13:36.12:501,36,0	0/0:22,0:22:60.54:0,61,686	0/0:18,0:18:35.11:0,35,423	0/0:37,0:37:99:0,111,1308	0/0:19,0:19:57.17:0,57,684	0/0:22,0:22:63.17:0,63,743	1/1:2,33:35:99:1353,99,0	0/0:33,0:33:99:0,99,1157	0/0:34,0:34:99:0,99,1163	0/0:26,0:26:72.20:0,72,850	1/1:0,21:21:45.15:630,45,0	1/1:1,33:34:87.29:1218,87,0	0/0:26,0:26:78.21:0,78,910	1/1:0,47:47:99:1764,126,0	1/1:0,35:35:93.31:1302,93,0	1/1:0,21:21:57.19:794,57,0	1/1:0,14:14:36.12:504,36,0	1/1:3,15:18:45.15:630,45,0	1/1:2,30:32:87.21:1175,87,0	1/1:2,29:31:81.27:1134,81,0	1/1:3,25:28:60.16:818,60,0	1/1:1,18:19:48.16:672,48,0	1/1:2,28:30:78.26:1092,78,0	0/0:22,0:22:60.18:0,60,720	0/0:30,0:30:84.24:0,84,989	1/1:2,29:31:78.26:1092,78,0	0/0:9,0:9:27.08:0,27,324
chr10	52205873	.	A	ATATG	4734.79	PASS	AB=0.709;AC=18;AF=0.360;AN=50;BaseQRankSum=-10.742;DP=571;FS=13.071;HRun=0;HaplotypeScore=93.8712;InbreedingCoeff=0.7421;MQ=57.69;MQ0=6;MQRankSum=2.599;QD=26.60;ReadPosRankSum=3.373;VQSLOD=3.6303;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:27:48.13:0,48,692	./.	./.	./.	0/0:33,0:33:45.12:0,45,652	0/0:22,0:22:42.05:0,42,516	0/0:19,0:19:24.03:0,24,298	0/0:47,0:47:8.92:0,9,79	0/0:15,0:15:24.06:0,24,348	0/0:29,0:29:54.17:0,54,796	1/1:10,15:25:21.07:493,21,0	1/1:4,15:21:36.12:846,36,0	1/1:6,15:21:39.13:899,39,0	0/0:16,0:16:18.05:0,18,255	1/1:12,14:27:30.10:705,30,0	0/1:9,10:19:69.99:331,0,70	1/1:13,5:18:12.04:282,12,0	0/1:11,5:16:34.83:332,0,35	0/0:16,0:14:6.01:0,6,74	0/0:27,0:27:48.11:0,48,673	0/0:12,0:12:21.04:0,21,278	1/1:2,6:8:6.02:141,6,0	1/1:2,11:14:27.09:635,27,0	1/1:4,4:8:3.01:71,3,0	0/0:19,0:19:27.07:0,27,393	0/0:30,0:30:45.15:0,45,694	0/0:30,0:30:45.09:0,45,597	0/0:20,0:20:27.04:0,27,351
chr10	52208080	.	A	AT	7713.13	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=-4.677;DP=415;FS=0.396;HRun=5;HaplotypeScore=43.3954;InbreedingCoeff=0.9597;MQ=74.70;MQ0=0;MQRankSum=-1.921;QD=33.98;ReadPosRankSum=-0.577;VQSLOD=4.6623;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,22:24:45.15:592,45,0	1/1:0,2:2:3.01:39,3,0	0/0:8,0:8:12.02:0,12,129	0/0:8,0:8:23.89:0,24,239	0/0:19,0:19:51.13:0,51,548	0/0:19,0:19:54.05:0,54,565	0/0:11,0:11:30.06:0,30,314	1/1:2,35:37:99:1349,105,0	0/0:8,0:8:21.05:0,21,226	0/0:19,0:19:54.14:0,54,580	0/0:17,0:17:48.11:0,48,508	1/1:0,7:7:18.04:237,18,0	1/1:1,8:9:24.08:316,24,0	0/0:10,0:10:27.05:0,27,282	1/1:0,8:8:15.05:197,15,0	1/1:0,5:5:15.05:197,15,0	1/1:0,21:21:57.19:750,57,0	1/1:0,5:5:12.04:158,12,0	1/1:2,17:19:51.17:671,51,0	1/1:1,19:20:54.14:692,54,0	1/1:0,12:12:30.10:395,30,0	1/1:0,8:8:21.07:276,21,0	1/1:0,14:14:39.13:513,39,0	1/1:0,12:12:36.12:474,36,0	0/0:31,0:31:81.19:0,81,863	0/0:19,0:19:51.13:0,51,548	1/1:2,22:24:66.21:856,66,0	0/0:19,0:19:48.12:0,48,516
chr10	52208209	.	GAC	G	379.27	PASS	AB=0.927;AC=18;AF=0.375;AN=48;BaseQRankSum=4.025;DP=427;FS=0.000;HRun=0;HaplotypeScore=70.9443;InbreedingCoeff=0.0010;MQ=64.55;MQ0=6;MQRankSum=-0.285;QD=1.57;ReadPosRankSum=2.412;VQSLOD=1.0234;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:19,0:20:0:0,0,0	0/0:3,0:3:2.99:0,3,23	./.	./.	0/0:19,0:18:9:0,9,92	0/1:20,1:23:33.38:33,0,237	0/1:16,3:19:83.74:84,0,174	./.	0/1:12,1:13:17.21:17,0,140	0/0:13,0:13:6.02:0,6,88	0/1:15,1:16:17.22:17,0,140	1/1:6,2:8:6.02:64,6,0	0/0:9,0:9:5.47:0,5,226	0/1:10,0:10:17.15:17,0,121	0/0:14,0:14:8.96:0,9,74	0/0:1,0:6:3:0,3,25	0/1:19,1:32:8.37:8,0,189	0/0:11,0:13:14.87:0,15,138	1/1:7,0:8:2.84:14,3,0	1/1:2,0:8:11.36:56,11,0	./.	0/1:9,1:10:18.92:26,0,19	0/0:10,0:10:0:0,0,0	0/1:21,1:23:51.55:52,0,158	0/1:24,0:26:51.50:52,0,233	0/0:18,0:17:12.96:0,13,140	1/1:16,0:23:17.04:84,17,0	0/0:7,0:7:9.03:0,9,114
chr10	52208362	.	T	TG	13726.05	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=16.897;DP=572;FS=13.082;HRun=0;HaplotypeScore=77.5442;InbreedingCoeff=0.9975;MQ=70.53;MQ0=0;MQRankSum=-1.342;QD=41.72;ReadPosRankSum=1.808;VQSLOD=4.4276;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,31:31:78.26:1230,78,0	1/1:0,6:6:15.05:238,15,0	0/0:13,0:13:36.12:0,36,503	0/0:14,0:14:33.11:0,33,444	0/0:27,0:27:81.25:0,81,1099	0/0:23,0:23:69.23:0,69,965	0/0:25,0:25:75.22:0,75,996	1/1:0,32:32:93.31:1455,93,0	0/0:11,0:11:33.09:0,33,431	0/0:29,0:29:87.29:0,87,1214	0/0:23,0:23:66.20:0,66,878	1/1:0,22:22:66.22:1042,66,0	1/1:0,21:21:48.10:737,48,0	0/0:17,0:17:48.16:0,48,671	1/1:1,23:24:66.22:1051,66,0	1/1:1,22:23:33.40:883,33,0	1/1:0,28:28:75.26:1197,75,0	1/1:0,14:14:30.10:478,30,0	1/1:0,13:13:39.13:623,39,0	1/1:0,23:23:63.06:942,63,0	1/1:0,12:12:33.11:527,33,0	1/1:2,20:22:57.19:911,57,0	1/1:0,15:15:33.11:525,33,0	1/1:0,14:14:39.13:619,39,0	0/0:18,0:18:51.17:0,51,713	0/0:25,0:25:75.20:0,75,982	1/1:1,28:29:81.27:1268,81,0	0/0:18,0:18:54.15:0,54,735
chr10	52208993	.	C	CT	8582.58	PASS	AB=0.825;AC=32;AF=0.571;AN=56;BaseQRankSum=-9.422;DP=551;FS=0.000;HRun=9;HaplotypeScore=65.2599;InbreedingCoeff=0.8951;MQ=79.14;MQ0=0;MQRankSum=-1.192;QD=24.38;ReadPosRankSum=-0.070;VQSLOD=5.3754;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,18:20:54.13:582,54,0	1/1:2,4:6:15.04:166,15,0	0/0:21,0:21:41.84:0,42,343	0/1:15,0:14:1.87:2,0,158	0/0:26,0:26:68.97:0,69,599	0/0:29,0:29:68.96:0,69,599	0/0:14,0:14:38.99:0,39,339	1/1:13,22:35:66.63:722,67,0	0/0:13,0:13:32.98:0,33,282	0/0:23,0:23:62.99:0,63,547	0/0:25,1:26:35.80:0,36,540	1/1:4,15:19:48.11:521,48,0	1/1:7,16:23:37.05:606,37,0	0/0:15,1:16:8.88:0,9,305	1/1:3,20:24:39.96:652,40,0	1/1:9,21:30:74.99:790,75,0	1/1:7,17:24:54.59:587,55,0	1/1:2,20:22:54.15:597,54,0	1/1:11,17:28:62.98:667,63,0	1/1:6,20:26:63.17:697,63,0	1/1:5,9:14:27.07:299,27,0	1/1:3,8:11:27.06:290,27,0	0/1:6,6:13:2.12:181,0,2	1/1:0,18:18:54.14:595,54,0	0/0:17,0:17:44.99:0,45,391	0/0:10,0:10:26.99:0,27,234	1/1:1,22:22:57.15:630,57,0	0/0:4,0:4:12:0,12,104
chr10	52210142	.	A	AAC	770.43	PASS	AB=0.821;AC=12;AF=0.231;AN=52;BaseQRankSum=-3.446;DP=601;FS=33.987;HRun=0;HaplotypeScore=109.4315;InbreedingCoeff=0.0135;MQ=62.91;MQ0=11;MQRankSum=1.123;QD=3.55;ReadPosRankSum=1.500;VQSLOD=1.0218;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:37:26.76:0,27,135	0/1:5,2:7:22.99:80,0,23	./.	./.	0/0:19,0:19:12.02:0,12,123	0/1:26,0:26:1.46:1,0,147	0/0:18,0:21:14.53:0,15,100	1/1:29,0:30:2.84:14,3,0	0/0:10,0:12:14.87:0,15,144	0/0:21,0:23:17.82:0,18,168	0/0:25,0:25:15.48:0,15,148	0/1:9,3:15:19.13:38,0,19	0/0:20,0:20:2.93:0,3,23	0/0:20,0:20:1.32:0,1,110	0/1:11,7:21:37.11:200,0,37	0/1:16,6:22:83.12:195,0,83	0/0:28,0:31:16.41:0,16,122	0/0:16,0:16:10.83:0,11,69	0/0:18,0:19:11.32:0,11,55	0/0:20,0:29:8.52:0,9,42	0/0:17,0:18:1.55:0,2,4	0/1:16,5:21:78.40:113,0,78	0/1:21,5:25:30.47:36,0,30	1/1:11,6:19:14.90:222,15,0	0/1:22,1:27:11.70:12,0,236	0/0:22,0:22:20.59:0,21,173	0/0:10,0:17:14.16:0,14,70	0/0:12,0:12:2.40:0,2,62
chr10	52211575	.	TGATGATGATGACAATGAC	T	653.20	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=2.560;DP=670;FS=0.000;HRun=0;HaplotypeScore=315.9943;InbreedingCoeff=0.6919;MQ=67.40;MQ0=1;MQRankSum=-5.056;QD=12.56;ReadPosRankSum=0.207;VQSLOD=1.7895;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:64.09:0,64,2398	0/0:9,0:9:27.02:0,27,790	0/0:29,0:20:52.42:0,52,1302	0/0:30,0:21:27.09:0,27,807	0/0:30,0:30:84.29:0,84,4134	0/0:22,0:22:63.22:0,63,3203	0/0:18,0:18:40.76:0,41,2428	0/0:40,0:40:90.30:0,90,2229	0/0:28,0:28:78.25:0,78,5101	0/0:25,0:25:57.20:0,57,3759	0/0:24,0:24:57.20:0,57,2835	0/0:22,0:22:35.44:0,35,1441	0/0:24,0:24:66.14:0,66,2152	0/0:23,0:23:63.20:0,63,3957	0/0:29,0:29:57.17:0,57,4072	0/0:20,0:20:51.11:0,51,2315	1/1:3,13:16:3.01:150,3,0	1/1:11,2:13:24.88:608,25,0	0/1:23,0:23:9.88:10,0,1930	0/0:25,0:25:60.09:0,60,2461	0/0:28,0:28:81.14:0,81,2999	0/0:22,0:22:57.16:0,57,1703	0/0:16,0:16:23.93:0,24,984	0/0:23,0:23:48.14:0,48,1689	0/0:26,0:26:69.24:0,69,3965	0/0:39,0:38:99:0,99,5169	0/0:32,0:32:90.15:0,90,3965	0/0:10,0:10:12.04:0,12,675
chr10	52211585	.	GACA	G	209.24	PASS	AB=0.979;AC=6;AF=0.107;AN=56;BaseQRankSum=5.685;DP=677;FS=5.944;HRun=0;HaplotypeScore=127.6768;InbreedingCoeff=0.5259;MQ=59.69;MQ0=7;MQRankSum=-4.741;QD=3.17;ReadPosRankSum=-1.742;VQSLOD=1.8081;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:60.09:0,60,1187	0/0:10,0:10:30.10:0,30,507	0/0:42,0:22:34.76:0,35,1047	0/0:36,0:15:33.11:0,33,718	0/0:32,0:32:90.31:0,90,2084	0/0:24,0:24:72.25:0,72,1629	0/0:20,1:21:40.09:0,40,1259	0/0:35,0:35:99:0,102,2110	0/0:27,0:27:81.26:0,81,1819	0/0:22,0:22:63.22:0,63,1400	0/0:27,0:27:63.67:0,64,1422	0/1:20,0:20:29.90:30,0,523	0/1:22,1:23:10.72:11,0,785	0/0:21,0:21:63.20:0,63,1378	0/0:33,0:33:96.33:0,96,1884	0/0:19,0:19:54.17:0,54,1006	1/1:13,0:13:2.98:22,3,0	1/1:7,3:10:24.02:270,24,0	0/0:22,0:22:8.31:0,8,799	0/0:28,0:28:78.27:0,78,1419	0/0:32,0:32:96.30:0,96,1707	0/0:22,0:22:31.16:0,31,841	0/0:12,0:12:26.87:0,27,431	0/0:20,1:22:24.46:0,24,636	0/0:27,0:27:81.28:0,81,1786	0/0:38,0:37:99:0,108,2404	0/0:32,0:32:96.31:0,96,1733	0/0:4,0:4:12.04:0,12,282
chr10	52211588	.	A	AATGATG	1746.21	PASS	AB=0.920;AC=12;AF=0.214;AN=56;BaseQRankSum=2.982;DP=691;FS=5.545;HRun=0;HaplotypeScore=164.7574;InbreedingCoeff=0.5215;MQ=58.73;MQ0=7;MQRankSum=-1.829;QD=10.15;ReadPosRankSum=-2.087;VQSLOD=1.9983;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:20.18:0,20,356	0/0:10,0:10:9.03:0,9,131	0/0:42,0:22:40.80:0,41,703	0/0:34,0:13:33.06:0,33,485	0/0:34,0:34:93.05:0,93,1628	0/0:25,0:25:72.14:0,72,1227	0/0:23,0:23:62.43:0,62,1175	0/0:34,0:34:90.19:0,90,1355	0/0:28,0:28:84.23:0,84,1545	0/0:22,0:22:60.21:0,60,1272	0/0:27,0:27:63.10:0,63,551	1/1:9,14:24:14.52:398,15,0	1/1:22,2:24:34.28:587,34,0	0/0:21,0:21:60.15:0,60,1163	0/0:32,0:32:22.62:0,23,919	0/0:17,0:17:9.58:0,10,398	0/0:13,0:13:3.01:0,3,42	0/1:10,0:10:35.61:36,0,99	0/1:20,0:20:19.26:19,0,252	0/0:29,0:29:1.07:0,1,566	0/1:31,0:31:17.87:18,0,587	1/1:11,11:23:9.03:245,9,0	0/1:9,6:17:1.15:92,0,1	1/1:20,1:23:27.31:520,27,0	0/0:26,0:26:72.18:0,72,1336	0/0:38,0:37:97.54:0,98,1255	0/0:32,0:32:6.17:0,6,584	0/0:6,0:6:17.52:0,18,172
chr10	52211618	.	G	GATA	1830.93	PASS	AB=1.000;AC=10;AF=0.179;AN=56;BaseQRankSum=-0.025;DP=674;FS=0.431;HRun=0;HaplotypeScore=125.7946;InbreedingCoeff=0.0233;MQ=57.39;MQ0=10;MQRankSum=1.385;QD=8.17;ReadPosRankSum=2.206;VQSLOD=3.2344;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:26:99:240,0,156	0/0:5,0:5:15.02:0,15,194	0/0:27,0:15:29.74:0,30,240	0/0:34,0:14:36.28:0,36,337	0/0:24,0:24:57.09:0,57,779	0/0:21,0:21:60.10:0,60,814	0/0:24,0:24:63.05:0,63,874	1/1:2,27:31:64.07:819,64,0	0/0:34,0:34:99:0,102,1285	0/0:26,0:26:78.02:0,78,1068	0/1:23,0:23:47.81:380,0,48	0/1:24,0:24:21.39:21,0,205	0/1:32,0:32:77.29:77,0,392	0/0:24,0:24:69.10:0,69,900	0/0:27,0:27:81.20:0,81,1182	0/0:16,0:16:45.08:0,45,602	0/0:19,0:19:9.41:0,9,75	0/0:13,0:13:23.45:0,23,297	0/0:24,0:19:48.81:0,49,563	0/0:28,0:27:68.59:0,69,910	0/0:29,0:29:84.08:0,84,1040	0/1:21,0:21:8.73:9,0,188	0/0:21,0:21:13.04:0,13,252	0/1:23,0:23:99:116,0,105	0/0:24,0:24:69.09:0,69,884	0/1:37,0:36:99:241,0,521	0/0:30,0:30:87.05:0,87,1055	0/1:7,0:7:72.90:76,0,73
chr10	52212969	.	C	CT	1297.31	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-2.678;DP=536;FS=0.000;HRun=1;HaplotypeScore=72.3390;InbreedingCoeff=0.9621;MQ=77.76;MQ0=0;MQRankSum=-0.950;QD=39.31;ReadPosRankSum=1.831;VQSLOD=4.3019;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,31:33:93.32:1392,93,0	0/0:4,0:4:12.04:0,12,156	0/0:20,0:20:48.10:0,48,564	0/0:18,0:18:42.13:0,42,523	0/0:22,0:22:66.20:0,66,841	0/0:27,0:27:81.25:0,81,1036	0/0:19,0:19:57.19:0,57,738	0/0:31,0:31:87.27:0,87,1117	0/0:17,0:17:48.09:0,48,587	0/0:26,0:26:75.23:0,75,959	0/0:16,0:16:48.09:0,48,602	0/0:25,0:25:66.19:0,66,829	0/0:13,0:13:39.13:0,39,505	0/0:15,0:15:42.07:0,42,523	0/0:14,0:14:36.04:0,36,432	0/0:15,0:15:42.07:0,42,524	0/0:29,0:29:84.24:0,84,1060	0/0:7,0:7:21.07:0,21,272	0/0:19,0:19:54.17:0,54,697	0/0:19,0:19:57.19:0,57,740	0/0:24,0:24:69.22:0,69,896	0/0:11,0:11:32.99:0,33,384	0/0:12,0:12:36.12:0,36,466	0/0:19,0:19:48.14:0,48,608	0/0:25,0:25:75.24:0,75,973	0/0:20,0:20:54.18:0,54,701	0/0:28,0:28:69.19:0,69,877	0/0:7,0:7:21.07:0,21,272
chr10	52213011	.	TG	T	339.58	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.306;DP=576;FS=4.407;HRun=8;HaplotypeScore=92.9921;InbreedingCoeff=0.9557;MQ=66.01;MQ0=1;MQRankSum=-0.851;QD=11.32;ReadPosRankSum=-0.977;VQSLOD=2.7493;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,24:30:45.06:434,45,0	0/0:7,0:7:18.05:0,18,207	0/0:38,0:33:52.32:0,52,810	0/0:19,0:17:20.36:0,20,219	0/0:29,0:29:63.19:0,63,758	0/0:24,0:24:60.18:0,60,724	0/0:21,0:21:60.08:0,60,670	0/0:26,0:26:57.17:0,57,687	0/0:13,0:13:36.11:0,36,435	0/0:28,0:28:63.06:0,63,722	0/0:24,2:26:37.20:0,37,709	0/0:23,0:23:45.08:0,45,378	0/0:18,0:18:41.41:0,41,300	0/0:19,0:19:48.15:0,48,579	0/0:15,0:15:36.11:0,36,434	0/0:18,0:18:48.14:0,48,575	0/0:20,0:20:51.16:0,51,616	0/0:5,0:5:12.04:0,12,145	0/0:19,0:18:34.85:0,35,201	0/0:18,0:18:41:0,41,255	0/0:23,0:23:41.84:0,42,362	0/0:12,0:12:32.41:0,32,220	0/0:16,0:16:47.22:0,47,340	0/0:30,0:30:64.68:0,65,429	0/0:27,0:27:78.18:0,78,914	0/0:18,0:18:42.12:0,42,493	0/0:21,0:21:53.51:0,54,371	0/0:13,0:13:24.28:0,24,407
chr10	52213513	.	G	GA	1387.84	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-7.628;DP=680;FS=15.858;HRun=6;HaplotypeScore=64.4493;InbreedingCoeff=0.9842;MQ=83.58;MQ0=0;MQRankSum=-1.701;QD=30.17;ReadPosRankSum=1.157;VQSLOD=2.6215;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:81.16:0,81,817	0/0:4,0:4:12.03:0,12,122	0/0:22,0:22:63.03:0,63,622	0/0:21,0:22:37.68:0,38,412	0/0:34,0:34:81.17:0,81,825	0/0:26,0:26:69.12:0,69,689	0/0:23,0:23:63.12:0,63,636	0/0:35,0:35:87.18:0,87,883	0/0:19,0:19:57.13:0,57,581	0/0:41,0:40:99:0,111,1111	0/0:19,0:19:51.08:0,51,505	0/0:15,0:15:42.08:0,42,422	0/0:24,0:24:69.16:0,69,704	0/0:28,0:28:78.17:0,78,796	0/0:27,0:27:78.13:0,78,771	0/0:25,0:25:69.16:0,69,704	1/1:3,22:25:66.21:830,66,0	1/1:1,20:21:54.17:679,54,0	0/0:24,0:24:57.11:0,57,567	0/0:31,0:31:84.06:0,84,831	0/0:27,0:27:78.14:0,78,786	0/0:19,0:19:45.09:0,45,458	0/0:28,0:28:60.12:0,60,611	0/0:27,0:27:72.12:0,72,714	0/0:29,0:29:72.15:0,72,733	0/0:17,0:17:45.05:0,45,444	0/0:26,0:24:69.15:0,69,703	0/0:13,0:13:39.09:0,39,397
chr10	52213822	.	T	TA	10231.60	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-14.791;DP=660;FS=2.121;HRun=7;HaplotypeScore=65.7716;InbreedingCoeff=0.9975;MQ=76.39;MQ0=0;MQRankSum=-0.632;QD=28.90;ReadPosRankSum=1.699;VQSLOD=5.6369;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:93.11:0,93,890	1/1:1,10:11:30.09:362,30,0	0/0:13,0:14:34.05:0,34,344	0/0:14,0:14:14.81:0,15,122	0/0:29,0:29:78.09:0,78,743	0/0:22,0:22:56.99:0,57,526	0/0:19,0:19:51.05:0,51,483	1/1:4,0:35:80.83:434,81,0	0/0:16,0:16:48.08:0,48,463	0/0:37,0:37:96.15:0,96,927	0/0:25,0:25:75.06:0,75,713	1/1:4,20:24:60.18:725,60,0	1/1:3,31:34:58.29:986,58,0	0/0:18,0:18:45.06:0,45,434	1/1:3,21:24:57.17:689,57,0	1/1:0,25:25:66.20:797,66,0	1/1:0,18:18:48.15:580,48,0	1/1:0,19:19:51.16:616,51,0	1/1:0,23:23:69.19:819,69,0	1/1:7,29:36:87.27:1051,87,0	1/1:1,11:12:30.09:362,30,0	1/1:2,15:17:42.09:491,42,0	1/1:1,19:20:54.15:652,54,0	1/1:1,19:19:54.17:652,54,0	0/0:33,0:33:90.10:0,90,853	0/0:28,0:28:72.08:0,72,683	1/1:3,33:36:84.05:1015,84,0	0/0:14,0:14:39.04:0,39,370
chr10	52214563	.	G	GAAA	29816.66	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-16.936;DP=805;FS=2.189;HRun=0;HaplotypeScore=100.1614;InbreedingCoeff=0.9988;MQ=80.99;MQ0=0;MQRankSum=-6.624;QD=63.44;ReadPosRankSum=3.268;VQSLOD=6.7937;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,120,2237	1/1:0,10:11:30.10:740,30,0	0/0:18,0:18:54.18:0,54,973	0/0:28,0:28:78.23:0,78,1364	0/0:29,0:29:87.25:0,87,1517	0/0:29,0:29:87.30:0,87,1622	0/0:33,0:33:96.30:0,96,1728	1/1:7,31:39:99:2781,117,0	0/0:28,0:28:81.25:0,81,1440	0/0:33,0:33:96.32:0,96,1754	0/0:20,0:19:57.20:0,57,1055	1/1:0,26:28:66.23:1593,66,0	1/1:2,39:43:99:2847,117,0	0/0:26,0:26:78.27:0,78,1434	1/1:1,38:40:99:2701,111,0	1/1:2,41:43:99:2921,120,0	1/1:1,32:36:81.28:1996,81,0	1/1:0,14:14:36.12:887,36,0	1/1:2,18:21:60.21:1451,60,0	1/1:2,22:25:75.25:1704,75,0	1/1:1,35:38:96.28:2209,96,0	1/1:2,18:21:54.19:1329,54,0	1/1:1,34:35:99:2445,102,0	1/1:2,28:32:69.24:1701,69,0	0/0:16,0:16:48.16:0,48,895	0/0:27,0:27:81.28:0,81,1506	1/1:0,37:41:99:2512,102,0	0/0:8,0:8:18.06:0,18,336
chr10	52217573	.	TG	T	4491.71	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=15.242;DP=720;FS=11.000;HRun=5;HaplotypeScore=93.3063;InbreedingCoeff=0.9993;MQ=80.44;MQ0=0;MQRankSum=-1.817;QD=29.36;ReadPosRankSum=3.504;VQSLOD=4.5812;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:69.14:0,69,901	0/0:8,0:8:24.08:0,24,317	0/0:27,0:27:75.23:0,75,981	0/0:29,0:29:68.19:0,68,854	0/0:30,0:30:87.29:0,87,1179	0/0:33,0:33:93.31:0,93,1271	0/0:23,0:23:69.20:0,69,910	0/0:30,0:30:72.23:0,72,968	0/0:37,0:37:99:0,102,1372	0/0:22,0:22:57.18:0,57,763	0/0:13,0:13:39.13:0,39,526	1/1:3,24:27:63.18:713,63,0	1/1:0,27:27:68.87:781,69,0	0/0:23,0:23:69.22:0,69,930	0/0:45,0:45:99:0,132,1787	0/0:23,0:23:66.22:0,66,903	1/1:1,11:12:33.09:374,33,0	1/1:1,10:11:27.04:293,27,0	0/0:23,0:23:57.17:0,57,750	0/0:32,0:32:93.29:0,93,1250	0/0:27,0:27:78.26:0,78,1067	1/1:1,24:25:69.15:768,69,0	1/1:2,20:22:63.18:712,63,0	1/1:1,28:29:75.21:851,75,0	0/0:24,0:24:63.19:0,63,844	0/0:37,0:37:99:0,102,1348	0/0:43,0:43:99:0,126,1668	0/0:13,0:13:30.10:0,30,410
chr10	52221928	.	TA	T	3614.85	PASS	AB=0.800;AC=15;AF=0.268;AN=56;BaseQRankSum=0.148;DP=616;FS=5.704;HRun=9;HaplotypeScore=78.5489;InbreedingCoeff=0.9024;MQ=73.79;MQ0=1;MQRankSum=-0.169;QD=23.94;ReadPosRankSum=2.149;VQSLOD=4.5547;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:57.17:0,57,657	0/0:0,0:7:17.04:0,17,87	0/0:8,0:8:21.02:0,21,219	0/0:13,0:12:11.10:0,11,153	0/0:30,0:30:63.16:0,63,706	0/0:27,0:27:75.21:0,75,855	0/0:15,0:15:30.09:0,30,346	0/0:8,0:21:43.38:0,43,275	0/0:25,0:25:60.18:0,60,692	0/0:30,0:30:78.23:0,78,894	0/0:24,0:24:60.17:0,60,683	1/1:4,23:27:78.03:710,78,0	1/1:4,24:28:66.03:604,66,0	0/0:23,0:23:63.12:0,63,702	0/0:3,0:32:65.34:0,65,332	0/0:4,0:28:68.35:0,68,367	1/1:2,21:23:63.03:577,63,0	1/1:0,11:12:35.06:308,35,0	0/0:7,0:27:58.71:0,59,319	0/0:3,0:40:99:0,106,554	0/0:2,0:13:28.41:0,28,144	1/1:2,25:27:75.04:686,75,0	1/1:3,15:18:45.02:412,45,0	1/1:0,12:12:33.02:302,33,0	0/0:23,0:23:54.16:0,54,623	0/0:26,1:27:44.75:0,45,769	0/0:5,0:29:68.18:0,68,346	0/1:3,1:4:15.42:15,0,92
chr10	52222031	.	T	TA	7582.93	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-13.930;DP=703;FS=1.459;HRun=2;HaplotypeScore=63.9666;InbreedingCoeff=0.9995;MQ=91.96;MQ0=0;MQRankSum=-1.871;QD=44.09;ReadPosRankSum=3.190;VQSLOD=4.1500;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:87.29:0,87,1210	0/0:11,0:11:33.10:0,33,444	0/0:29,0:29:87.28:0,87,1181	0/0:28,0:28:75.20:0,75,957	0/0:38,0:38:99:0,111,1545	0/0:24,0:24:72.22:0,72,986	0/0:14,0:14:42.13:0,42,570	0/0:29,0:29:87.28:0,87,1202	0/0:13,0:13:39.13:0,39,545	0/0:27,0:27:81.27:0,81,1131	0/0:20,0:20:57.17:0,57,777	1/1:0,35:35:99:1631,102,0	1/1:1,22:23:24.27:965,24,0	0/0:16,0:16:48.16:0,48,671	0/0:44,0:44:99:0,129,1786	0/0:36,0:36:99:0,105,1466	1/1:0,17:17:42.14:671,42,0	1/1:0,23:23:66.23:1055,66,0	0/0:21,0:21:63.21:0,63,880	0/0:36,0:36:99:0,105,1464	0/0:24,0:24:72.24:0,72,1002	1/1:0,22:22:66.23:1055,66,0	1/1:1,31:32:84.29:1342,84,0	1/1:0,20:20:54.18:863,54,0	0/0:19,0:19:57.19:0,57,797	0/0:28,0:28:84.26:0,84,1141	0/0:32,0:32:96.31:0,96,1323	0/0:13,0:13:36.12:0,36,504
chr10	52242121	.	T	TACAC	1758.87	PASS	AB=0.883;AC=29;AF=0.518;AN=56;BaseQRankSum=5.718;DP=466;FS=6.471;HRun=0;HaplotypeScore=102.1477;InbreedingCoeff=0.5685;MQ=72.37;MQ0=10;MQRankSum=-4.855;QD=6.22;ReadPosRankSum=-2.592;VQSLOD=0.7588;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:29:7.48:73,7,0	1/1:2,0:5:3.01:61,3,0	0/0:29,0:18:5.81:0,6,53	0/1:38,0:25:8.96:9,0,81	0/0:15,0:15:12.03:0,12,156	0/0:17,0:17:21.07:0,21,320	0/0:25,0:25:20.90:0,21,317	1/1:27,0:26:30.02:354,30,0	0/0:11,0:12:15.04:0,15,208	0/0:17,0:17:15:0,15,216	0/0:11,0:11:15.05:0,15,221	1/1:11,0:15:6.02:97,6,0	1/1:8,0:9:3.01:65,3,0	0/0:12,0:12:9.03:0,9,130	0/1:17,0:17:24.76:266,0,25	1/1:9,6:16:3.01:60,3,0	1/1:12,0:11:9.03:122,9,0	1/1:11,0:7:6.91:99,7,0	1/1:17,0:17:20.99:345,21,0	0/1:6,0:12:0:0,0,0	1/1:21,8:27:6.02:75,6,0	1/1:10,0:11:3.01:50,3,0	0/0:10,0:9:0:0,0,1	1/1:19,0:19:2.86:46,3,0	0/0:12,0:12:9.91:0,10,137	0/0:16,0:16:17.93:0,18,232	1/1:14,0:13:19.18:220,19,0	0/0:6,0:4:3.01:0,3,46
chr10	52242147	.	CACAG	C	333.45	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=1.848;DP=467;FS=4.148;HRun=0;HaplotypeScore=97.5602;InbreedingCoeff=0.0649;MQ=45.86;MQ0=14;MQRankSum=4.770;QD=1.85;ReadPosRankSum=-1.631;VQSLOD=1.6726;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:27:2.84:0,3,75	0/0:3,0:3:3.01:0,3,46	0/1:8,0:3:0.85:1,0,16	0/0:14,0:4:11.99:0,12,105	0/0:13,6:18:23.53:0,24,246	0/0:25,0:25:41.78:0,42,434	0/0:17,0:17:11.14:0,11,263	0/0:29,0:27:30.93:0,31,298	0/0:15,0:15:29.65:0,30,290	0/1:16,0:16:21.31:21,0,169	0/1:21,0:21:65.33:65,0,252	1/1:18,0:18:20.01:137,20,0	0/1:14,0:14:37.95:79,0,38	0/0:17,0:17:12.25:0,12,255	0/1:18,0:18:6.28:6,0,184	0/0:12,0:12:9.32:0,9,86	0/0:13,0:12:23.70:0,24,165	0/0:10,0:7:15.33:0,15,123	0/0:16,0:16:29.97:0,30,336	0/1:18,0:17:9.77:10,0,75	0/0:31,0:27:23.88:0,24,228	0/1:13,0:12:11.85:12,0,40	1/1:16,0:14:14.36:87,14,0	0/1:15,0:15:52.07:59,0,52	0/0:13,0:13:3.79:0,4,294	0/1:22,0:22:8.51:9,0,505	0/0:18,0:16:34.03:0,34,279	0/0:7,0:5:6.47:0,6,69
chr10	52242858	.	GGCGCA	G	7837.78	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=14.752;DP=660;FS=3.832;HRun=0;HaplotypeScore=161.0900;InbreedingCoeff=0.9990;MQ=90.67;MQ0=0;MQRankSum=-16.603;QD=55.98;ReadPosRankSum=1.540;VQSLOD=5.3448;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,132,4215	0/0:9,0:9:27.09:0,27,640	0/0:37,0:37:99:0,108,3120	0/0:32,0:32:90.31:0,90,2556	0/0:17,0:17:51.18:0,51,1587	0/0:23,0:23:63.22:0,63,2027	0/0:29,0:29:81.28:0,81,2617	0/0:28,0:28:78.27:0,78,1793	0/0:18,0:18:54.19:0,54,1712	0/0:31,0:31:87.29:0,87,2690	0/0:17,0:17:51.16:0,51,1527	1/1:2,18:20:54.19:1191,54,0	1/1:1,21:22:66.21:1426,66,0	0/0:17,0:17:48.16:0,48,1550	0/0:28,0:28:84.29:0,84,1970	0/0:27,0:27:81.28:0,81,1922	1/1:5,18:22:57.14:1212,57,0	1/1:0,8:8:21.07:468,21,0	0/0:17,0:17:51.17:0,51,1174	0/0:25,0:25:75.26:0,75,1758	0/0:25,0:25:75.24:0,75,1712	1/1:2,24:26:69.24:1537,69,0	1/1:2,20:22:57.20:1267,57,0	1/1:3,16:19:33.02:735,33,0	0/0:25,0:25:75.26:0,75,2422	0/0:24,0:24:72.25:0,72,2321	0/0:36,0:36:99:0,106,2458	0/0:11,0:11:33.11:0,33,998
chr10	52242895	.	GC	G	3672.14	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=14.747;DP=645;FS=1.738;HRun=5;HaplotypeScore=111.6155;InbreedingCoeff=0.9996;MQ=92.50;MQ0=0;MQRankSum=-11.329;QD=24.81;ReadPosRankSum=2.308;VQSLOD=2.4557;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,132,1756	0/0:9,0:9:27.09:0,27,369	0/0:34,0:34:90.24:0,90,1208	0/0:29,0:29:79.47:0,79,1025	0/0:20,0:20:54.17:0,54,721	0/0:21,0:21:63.20:0,63,845	0/0:28,0:28:78.23:0,78,1034	0/0:26,0:26:69.21:0,69,915	0/0:19,0:19:42.11:0,42,541	0/0:24,0:24:66.20:0,66,870	0/0:19,0:19:57.19:0,57,779	1/1:2,16:18:48.14:542,48,0	1/1:1,21:22:60.16:669,60,0	0/0:18,0:18:51.17:0,51,697	0/0:25,0:25:72.24:0,72,985	0/0:23,0:23:66.22:0,66,903	1/1:3,26:29:66.19:747,66,0	1/1:0,11:11:30.09:340,30,0	0/0:16,0:16:45.10:0,45,550	0/0:24,0:24:69.23:0,69,942	0/0:27,0:27:81.21:0,81,1069	1/1:4,19:23:39.11:441,39,0	1/1:3,16:19:30.01:340,30,0	1/1:3,23:26:54.14:594,54,0	0/0:23,0:23:63.20:0,63,847	0/0:24,0:24:66.18:0,66,844	0/0:29,0:29:84.16:0,84,1082	0/0:14,0:14:36.12:0,36,492
chr10	52243903	.	CTT	C	2604.26	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=11.037;DP=420;FS=2.268;HRun=5;HaplotypeScore=54.8219;InbreedingCoeff=0.8518;MQ=67.49;MQ0=0;MQRankSum=-0.552;QD=26.57;ReadPosRankSum=2.106;VQSLOD=1.8953;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:63.17:0,63,1105	0/0:3,0:3:9.03:0,9,165	0/0:8,0:5:8.52:0,9,117	0/1:11,0:6:50.54:51,0,57	0/0:28,0:28:84.29:0,84,1518	0/0:25,0:25:72.23:0,72,1278	0/0:6,0:6:18.06:0,18,330	0/0:32,0:32:93.31:0,93,1659	0/0:9,0:9:27.09:0,27,485	0/0:22,0:22:66.22:0,66,1149	0/0:26,0:26:78.27:0,78,1412	1/1:0,7:7:15.05:210,15,0	1/1:0,12:12:33.11:462,33,0	0/0:4,0:4:12.04:0,12,214	0/0:11,0:11:33.11:0,33,590	0/0:12,0:12:33.11:0,33,600	1/1:4,19:23:30.40:612,30,0	1/1:1,26:27:59.95:877,60,0	0/0:13,0:13:36.12:0,36,634	0/0:19,0:19:57.20:0,57,1037	0/0:4,0:4:12.03:0,12,187	1/1:0,2:2:6.02:84,6,0	1/1:1,8:9:17.62:251,18,0	1/1:1,6:7:18.06:252,18,0	0/0:21,0:21:63.19:0,63,1118	0/0:17,0:17:51.17:0,51,931	0/0:27,0:27:78.24:0,78,1333	0/0:14,0:14:42.14:0,42,769
chr10	52245484	.	ATT	A	3191.43	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=11.014;DP=442;FS=1.663;HRun=9;HaplotypeScore=74.0349;InbreedingCoeff=0.9705;MQ=67.79;MQ0=3;MQRankSum=-0.307;QD=25.74;ReadPosRankSum=3.690;VQSLOD=3.5987;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,22:24:57.16:664,57,0	0/0:3,0:6:9.81:0,10,50	0/0:27,0:13:29.13:0,29,387	0/0:28,0:13:22.26:0,22,288	0/0:19,0:18:54.18:0,54,883	0/0:9,0:9:27.09:0,27,443	0/0:4,0:4:6.02:0,6,98	0/0:31,0:31:69.18:0,69,1078	0/0:18,0:18:45.15:0,45,736	0/0:21,0:21:54.18:0,54,862	0/0:15,0:15:42.13:0,42,664	1/1:1,9:10:27.08:314,27,0	1/1:3,17:20:48.09:558,48,0	0/0:12,0:12:33.11:0,33,540	0/0:2,0:16:34.93:0,35,123	0/0:1,0:18:40.44:0,40,181	1/1:3,12:15:33.07:384,33,0	1/1:3,8:11:26.54:289,27,0	0/0:21,0:21:57.18:0,57,890	0/0:17,0:16:42.13:0,42,662	0/0:15,0:15:42.12:0,42,642	1/1:2,10:12:30.07:349,30,0	1/1:3,8:11:24.04:279,24,0	1/1:2,19:21:48.10:559,48,0	0/0:10,0:10:24.08:0,24,389	0/0:16,0:16:48.16:0,48,788	0/0:7,0:7:21.07:0,21,345	0/0:6,0:6:18.06:0,18,285
chr10	52246024	.	C	CACACACACAT	91.51	PASS	AB=0.789;AC=4;AF=0.111;AN=36;BaseQRankSum=4.619;DP=214;FS=0.000;HRun=0;HaplotypeScore=85.2235;InbreedingCoeff=0.3237;MQ=54.53;MQ0=8;MQRankSum=-4.940;QD=1.66;ReadPosRankSum=-2.849;VQSLOD=1.1703;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:6,11:22:17.52:65,0,18	./.	./.	0/0:7,0:3:1.90:0,2,8	0/0:16,0:16:45.09:0,45,1044	0/0:16,0:16:48.07:0,48,987	0/0:6,0:6:15.04:0,15,387	0/1:28,0:16:82.92:83,0,253	0/0:7,0:7:21.01:0,21,394	0/0:17,0:17:42.03:0,42,1021	0/0:13,0:13:39.10:0,39,993	./.	./.	0/0:9,0:9:24.01:0,24,367	0/0:3,0:2:0:0,0,0	./.	./.	./.	1/1:5,0:5:5.93:40,6,0	0/0:11,0:11:5.74:0,6,95	0/0:3,0:2:0.79:0,1,2	./.	./.	./.	0/0:14,0:13:33.02:0,33,512	0/0:16,0:15:42.04:0,42,923	0/0:12,0:11:15.04:0,15,278	0/0:3,0:3:9:0,9,222
chr10	52246038	.	T	TATATATAC	473.45	PASS	AB=0.885;AC=8;AF=0.190;AN=42;BaseQRankSum=4.385;DP=219;FS=13.832;HRun=0;HaplotypeScore=73.5359;InbreedingCoeff=0.4595;MQ=62.21;MQ0=3;MQRankSum=-4.473;QD=7.76;ReadPosRankSum=-3.755;VQSLOD=-0.5662;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:3.01:0,3,87	0/0:1,0:1:3:0,3,25	0/1:7,0:4:0:0,0,0	0/0:11,0:4:2.36:0,2,17	0/0:20,0:20:44.58:0,45,1131	0/0:14,0:14:42.08:0,42,1060	0/0:5,0:5:11.97:0,12,228	1/1:27,0:23:45.94:417,46,0	0/0:8,0:8:24.04:0,24,510	0/0:15,0:15:17.15:0,17,550	0/0:15,0:15:31.13:0,31,880	./.	0/0:1,0:1:3.01:0,3,48	0/0:9,0:9:24.05:0,24,571	0/0:2,0:2:0:0,0,0	./.	./.	./.	0/1:6,1:7:50.50:137,0,51	0/1:4,1:8:0:0,0,0	0/1:2,0:1:0:0,0,0	./.	./.	./.	0/0:15,0:14:41.87:0,42,783	0/0:14,0:13:35.17:0,35,878	1/1:6,2:9:2.90:25,3,0	0/0:5,0:5:14.93:0,15,198
chr10	52246058	.	G	GTATA	1057.05	PASS	AB=0.867;AC=11;AF=0.275;AN=40;BaseQRankSum=5.801;DP=206;FS=9.436;HRun=0;HaplotypeScore=53.3448;InbreedingCoeff=0.5506;MQ=63.07;MQ0=1;MQRankSum=-5.336;QD=17.05;ReadPosRankSum=-4.299;VQSLOD=1.0301;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:20:2.68:0,3,51	1/1:0,0:1:2.80:13,3,0	0/1:10,0:7:3.13:8,0,3	0/0:12,0:5:2.32:0,2,41	0/0:17,0:18:42.14:0,42,693	0/0:12,0:12:33.11:0,33,559	0/0:5,0:5:12.03:0,12,178	1/1:11,12:21:18.77:900,19,0	0/0:7,0:7:18.06:0,18,307	0/0:11,0:11:30.10:0,30,508	0/0:8,0:8:24.08:0,24,374	./.	./.	0/0:9,0:9:27.09:0,27,455	0/0:1,0:3:0.47:0,0,1	1/1:1,0:3:5.60:25,6,0	./.	./.	0/1:6,1:7:34.64:125,0,35	0/1:6,0:8:0:0,0,0	./.	./.	./.	./.	0/0:14,0:17:48.14:0,48,749	0/0:13,0:13:33.08:0,33,531	1/1:8,1:8:9.02:115,9,0	0/0:4,0:4:12.04:0,12,205
chr10	52246083	.	TATATATATAC	T	337.93	PASS	AB=0.926;AC=8;AF=0.190;AN=42;BaseQRankSum=5.240;DP=208;FS=1.333;HRun=0;HaplotypeScore=78.8684;InbreedingCoeff=0.4993;MQ=59.89;MQ0=3;MQRankSum=-5.645;QD=7.86;ReadPosRankSum=-1.120;VQSLOD=1.6136;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:24.08:0,24,1157	0/0:1,0:1:3.01:0,3,155	0/0:4,0:4:3.53:0,4,9	0/1:8,0:4:1.98:2,0,6	0/0:17,0:17:41.39:0,41,1512	0/0:12,0:12:36.11:0,36,1348	0/0:4,0:4:12.04:0,12,503	0/1:19,1:18:74.38:123,0,74	0/0:7,0:7:18.06:0,18,762	0/0:16,0:16:39.13:0,39,1869	0/0:11,0:11:20.10:0,20,807	./.	./.	0/0:10,0:10:27.09:0,27,1036	1/1:3,0:3:0.89:2,1,0	0/0:3,0:3:9.03:0,9,465	./.	./.	1/1:5,1:6:12.03:196,12,0	0/0:4,4:8:0.94:0,1,1	0/0:2,3:5:0.47:0,0,1	./.	./.	./.	0/0:18,0:18:54.18:0,54,2231	0/0:18,0:16:48.15:0,48,2112	1/1:5,0:5:5.89:126,6,0	0/0:4,0:4:9.03:0,9,465
chr10	52246924	.	ATTT	A	4242.25	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-0.599;DP=582;FS=15.577;HRun=11;HaplotypeScore=109.1482;InbreedingCoeff=0.9972;MQ=59.52;MQ0=7;MQRankSum=-1.460;QD=27.91;ReadPosRankSum=-0.645;VQSLOD=2.0871;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,32:35:60.16:789,60,0	0/0:3,0:12:29.91:0,30,254	0/0:23,0:10:18.95:0,19,472	0/0:16,0:8:21.05:0,21,325	0/0:37,0:39:99:0,108,2052	0/0:25,0:26:66.20:0,66,1282	0/0:12,0:12:36.12:0,36,698	1/1:3,24:27:69.14:858,69,0	0/0:12,0:14:40.38:0,40,766	0/0:16,0:16:42.14:0,42,826	0/0:25,0:25:57.18:0,57,1098	0/0:13,0:13:28.12:0,28,143	0/0:17,0:17:30.36:0,30,155	0/0:5,0:18:41.89:0,42,385	0/0:2,0:15:32.38:0,32,235	0/0:4,0:19:44.81:0,45,384	0/0:20,0:20:46.77:0,47,283	0/0:19,0:18:31.80:0,32,185	1/1:3,14:16:42.13:546,42,0	1/1:4,24:27:51.09:670,51,0	1/1:3,14:17:45.14:591,45,0	0/0:20,0:20:35.01:0,35,270	0/0:22,0:22:51.73:0,52,320	0/0:24,0:24:58.52:0,59,361	0/0:16,0:18:39.11:0,39,724	0/0:26,0:26:63.22:0,63,1248	1/1:4,23:25:60.16:788,60,0	0/0:15,0:15:45.13:0,45,815
chr10	52246934	.	TTG	T	3789.33	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=2.941;DP=560;FS=7.648;HRun=0;HaplotypeScore=102.3121;InbreedingCoeff=0.9988;MQ=68.72;MQ0=1;MQRankSum=-0.471;QD=31.32;ReadPosRankSum=3.409;VQSLOD=5.5249;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:57.63:0,58,246	0/0:9,0:9:26.32:0,26,155	0/0:22,0:18:40.74:0,41,504	0/0:19,0:15:32.73:0,33,398	0/0:39,0:39:99:0,114,1834	0/0:29,0:29:81.11:0,81,1258	0/0:16,0:16:48.07:0,48,708	0/0:27,0:27:66.76:0,67,321	0/0:15,0:15:37.39:0,37,682	0/0:17,0:17:51.04:0,51,760	0/0:23,0:23:60.16:0,60,1005	1/1:0,13:13:30.10:416,30,0	1/1:0,12:12:33.11:452,33,0	0/0:16,0:16:41.02:0,41,287	0/0:14,0:14:22.79:0,23,183	0/0:18,0:18:43.65:0,44,297	1/1:0,21:21:48.16:669,48,0	1/1:0,15:15:33.11:454,33,0	0/0:15,0:15:41.14:0,41,199	0/0:27,0:25:49.83:0,50,211	0/0:16,0:16:41.72:0,42,190	1/1:1,17:18:26.72:353,27,0	1/1:0,19:19:45.14:625,45,0	1/1:2,20:23:63.13:821,63,0	0/0:16,0:16:39.12:0,39,664	0/0:24,0:24:69.19:0,69,1134	0/0:26,0:24:46.10:0,46,185	0/0:18,0:18:48.41:0,48,738
chr10	52247005	.	AT	A	1939.08	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=2.919;DP=509;FS=1.536;HRun=8;HaplotypeScore=69.5909;InbreedingCoeff=0.9971;MQ=72.59;MQ0=0;MQRankSum=-1.011;QD=22.29;ReadPosRankSum=-0.738;VQSLOD=3.7885;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:54.12:0,54,635	0/0:10,0:10:30.07:0,30,348	0/0:17,0:13:33.09:0,33,377	0/0:22,0:21:35.45:0,35,429	0/0:25,0:25:69.20:0,69,824	0/0:26,0:26:75.23:0,75,906	0/0:9,0:9:21.06:0,21,254	1/1:4,16:20:48.07:463,48,0	0/0:8,0:8:24.07:0,24,284	0/0:28,0:28:81.25:0,81,979	0/0:32,0:32:75.23:0,75,906	0/0:15,0:15:42.13:0,42,504	0/0:11,0:11:27.08:0,27,326	0/0:18,0:18:48.15:0,48,580	0/0:17,0:17:39.12:0,39,471	0/0:21,0:21:60.18:0,60,724	0/0:17,0:17:39.12:0,39,471	0/0:12,0:12:24.03:0,24,273	1/1:1,13:14:39.06:377,39,0	1/1:4,14:18:42.07:405,42,0	1/1:0,8:8:24.04:232,24,0	0/0:16,0:16:39.11:0,39,462	0/0:22,0:22:60.18:0,60,725	0/0:20,0:20:57.17:0,57,689	0/0:16,0:16:45.14:0,45,542	0/0:20,0:20:57.17:0,57,679	1/1:3,24:27:66.10:637,66,0	0/0:16,0:16:48.15:0,48,580
chr10	52247124	.	C	CAGAG	2252.98	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=8.809;DP=465;FS=0.000;HRun=0;HaplotypeScore=108.4536;InbreedingCoeff=0.9427;MQ=76.14;MQ0=10;MQRankSum=-1.267;QD=25.60;ReadPosRankSum=-3.331;VQSLOD=2.8928;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:35.74:0,36,364	0/0:9,0:9:15.05:0,15,254	0/0:31,0:20:20.91:0,21,433	0/0:49,0:20:26.32:0,26,501	0/0:17,0:16:45.15:0,45,732	0/0:15,0:15:36:0,36,612	0/0:16,0:15:39.08:0,39,572	0/0:20,0:20:57.19:0,57,977	0/0:10,0:10:30.10:0,30,500	0/0:23,0:23:63.18:0,63,993	0/0:15,0:15:36.08:0,36,553	1/1:17,0:17:44.78:611,45,0	1/1:15,0:15:36.11:541,36,0	0/0:13,0:13:32.98:0,33,501	0/0:16,0:17:42.14:0,42,683	0/0:10,0:9:17.98:0,18,262	1/1:6,0:6:15.05:205,15,0	1/1:3,0:9:0.47:1,0,0	0/0:21,0:20:42.13:0,42,692	0/0:20,0:20:54.03:0,54,823	0/0:8,0:8:14.89:0,15,199	1/1:2,11:13:23.99:300,24,0	1/1:16,0:16:33.01:447,33,0	1/1:12,0:12:21.07:332,21,0	0/0:14,0:14:30.10:0,30,499	0/0:24,0:24:66.20:0,66,1074	0/0:20,0:20:50.97:0,51,738	0/0:3,0:3:9:0,9,120
chr10	52247130	.	AAGAGAG	A	674.77	PASS	AB=0.900;AC=22;AF=0.478;AN=46;BaseQRankSum=3.439;DP=469;FS=5.821;HRun=0;HaplotypeScore=120.4400;InbreedingCoeff=0.4979;MQ=71.83;MQ0=12;MQRankSum=-2.943;QD=4.22;ReadPosRankSum=1.824;VQSLOD=2.0651;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:22:3.01:42,3,0	1/1:4,3:7:5.69:71,6,0	./.	0/0:46,0:17:0:0,0,0	0/0:18,0:19:12.04:0,12,195	0/1:12,0:16:31.73:32,0,76	1/1:13,0:14:3.89:49,4,0	./.	0/0:11,0:11:9.01:0,9,104	0/0:26,0:26:14.90:0,15,114	./.	0/0:20,0:20:12:0,12,272	0/0:17,0:17:12.51:0,13,249	0/0:12,0:15:1.12:0,1,21	1/1:13,6:20:1.01:164,1,0	1/1:4,7:10:12.04:240,12,0	./.	1/1:7,0:7:3.01:40,3,0	0/0:17,0:16:0:0,0,0	1/1:14,0:20:12.04:167,12,0	0/1:8,0:8:0:0,0,0	0/0:14,0:14:8.95:0,9,165	1/1:15,0:15:0.94:3,1,0	0/0:12,0:12:9.03:0,9,193	1/1:12,0:14:0.89:2,1,0	0/0:24,0:23:23.23:0,23,350	./.	1/1:3,0:4:0.89:2,1,0
chr10	52247183	.	A	AAT	1801.17	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=3.246;DP=484;FS=38.444;HRun=0;HaplotypeScore=89.3812;InbreedingCoeff=0.8091;MQ=78.29;MQ0=13;MQRankSum=-3.961;QD=11.12;ReadPosRankSum=1.888;VQSLOD=1.4168;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:42:0,42,501	1/1:13,0:13:0.25:26,0,0	0/0:44,0:21:17.04:0,17,466	0/0:74,0:32:49.41:0,49,710	0/0:25,0:25:69.23:0,69,965	0/0:28,0:28:68.95:0,69,928	0/0:11,0:11:30.06:0,30,397	1/1:30,0:29:13.46:71,13,0	0/0:8,0:8:17.80:0,18,238	0/0:9,0:9:20.85:0,21,246	0/0:13,0:13:35.72:0,36,514	1/1:2,12:15:11.85:206,12,0	1/1:2,13:15:15.05:254,15,0	0/0:8,0:8:21.04:0,21,259	0/0:12,0:12:5.54:0,6,26	0/0:17,0:17:7.80:0,8,33	1/1:0,6:6:3.01:33,3,0	1/1:10,0:10:30.10:431,30,0	1/1:13,0:12:6.77:30,7,0	0/0:18,0:18:6.02:0,6,30	0/1:12,0:12:0.21:0,0,2	1/1:12,1:13:32.59:457,33,0	1/1:9,1:10:24.08:348,24,0	1/1:2,7:9:6.02:112,6,0	0/0:12,0:12:33.11:0,33,464	0/0:10,0:10:24.07:0,24,322	1/1:16,0:14:5.82:32,6,0	0/0:11,0:11:30.10:0,30,406
chr10	52247685	.	GA	G	4742.40	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=18.054;DP=695;FS=6.390;HRun=7;HaplotypeScore=87.5297;InbreedingCoeff=0.9985;MQ=76.91;MQ0=0;MQRankSum=0.034;QD=27.90;ReadPosRankSum=0.002;VQSLOD=5.1251;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:78.22:0,78,952	0/0:9,0:9:21.06:0,21,251	0/0:19,0:19:36.10:0,36,431	0/0:16,0:16:42.13:0,42,501	0/0:28,0:28:78.22:0,78,955	0/0:22,0:22:60.19:0,60,755	0/0:24,0:25:69.04:0,69,832	0/0:31,0:31:78.23:0,78,959	0/0:23,0:23:63.19:0,63,779	0/0:36,0:36:99:0,105,1314	0/0:19,0:19:51.16:0,51,642	1/1:2,15:17:45.10:459,45,0	1/1:0,37:37:99:1041,102,0	0/0:25,0:25:63.20:0,63,793	0/0:26,0:26:75.24:0,75,944	0/0:34,0:34:96.28:0,96,1182	1/1:2,23:25:66.15:673,66,0	1/1:1,14:15:42.09:428,42,0	0/0:20,0:20:60.19:0,60,750	0/0:30,0:30:84.27:0,84,1057	0/0:25,1:26:38.59:0,39,784	1/1:1,23:24:63.14:642,63,0	1/1:1,29:30:87.20:888,87,0	1/1:1,21:22:59.96:612,60,0	0/0:27,0:27:78.24:0,78,970	0/0:37,0:37:99:0,99,1233	0/0:34,0:34:93.28:0,93,1157	0/0:7,0:7:21.07:0,21,264
chr10	52248228	.	TA	T	2435.87	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=11.828;DP=595;FS=0.418;HRun=8;HaplotypeScore=70.6993;InbreedingCoeff=0.9989;MQ=88.05;MQ0=0;MQRankSum=-1.441;QD=22.14;ReadPosRankSum=1.797;VQSLOD=4.1471;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:31:78.24:0,78,942	0/0:10,0:10:27.08:0,27,326	0/0:27,0:27:59.86:0,60,775	0/0:17,0:17:34.83:0,35,349	0/0:28,0:28:72.21:0,72,860	0/0:29,0:30:80.31:0,80,1009	0/0:14,0:14:33.10:0,33,399	0/0:26,0:26:63.19:0,63,752	0/0:16,0:16:39.12:0,39,470	0/0:28,0:28:78.22:0,78,922	0/0:16,0:16:42.13:0,42,505	1/1:2,11:13:33.05:318,33,0	1/1:1,14:15:42.07:406,42,0	0/0:22,0:22:63.19:0,63,761	0/0:23,0:23:66.20:0,66,797	0/0:25,0:25:57.17:0,57,679	1/1:3,19:22:54.08:521,54,0	1/1:0,9:9:24.04:232,24,0	0/0:18,0:18:45.14:0,45,539	0/0:34,0:34:93.27:0,93,1112	0/0:15,0:15:42.13:0,42,507	1/1:3,15:18:42.06:406,42,0	1/1:4,19:23:54.08:521,54,0	1/1:1,9:10:24.03:231,24,0	0/0:34,0:34:93.29:0,93,1123	0/0:19,0:19:51.15:0,51,607	0/0:29,0:29:66.20:0,66,797	0/0:22,0:22:66.20:0,66,797
chr10	52248291	.	G	GTGTGTG	2415.78	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=-2.302;DP=731;FS=2.391;HRun=0;HaplotypeScore=177.7267;InbreedingCoeff=0.8218;MQ=57.83;MQ0=16;MQRankSum=-3.824;QD=13.96;ReadPosRankSum=-3.158;VQSLOD=2.8089;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:31.63:0,32,610	0/0:9,0:9:23.09:0,23,272	0/0:42,0:15:18.53:0,19,295	0/0:60,0:20:35.10:0,35,452	0/0:30,0:30:69.16:0,69,1274	0/0:30,0:30:72.24:0,72,1395	0/0:20,0:20:44.96:0,45,773	1/1:33,0:31:3.24:611,3,0	0/0:15,0:15:32.75:0,33,617	0/0:40,0:39:84.19:0,84,1507	0/0:27,0:27:60.16:0,60,1090	0/0:18,0:17:35.89:0,36,428	0/0:17,0:16:17.83:0,18,258	0/0:29,0:29:66.15:0,66,1071	0/0:19,0:19:36.10:0,36,509	0/0:31,0:31:63.20:0,63,876	0/1:28,0:27:8.17:8,0,423	0/0:9,0:8:4.23:0,4,100	1/1:24,0:22:31.33:787,31,0	1/1:31,0:29:39.09:518,39,0	1/1:25,0:25:16.99:237,17,0	0/0:28,0:28:54.11:0,54,527	0/0:21,0:21:24.38:0,24,281	0/0:16,0:14:14.51:0,15,104	0/0:23,0:23:51.06:0,51,946	0/0:25,0:25:45.13:0,45,834	1/1:21,8:30:27.78:424,28,0	0/0:11,0:11:33.10:0,33,564
chr10	52248293	.	T	TTG	1746.49	PASS	AB=0.865;AC=29;AF=0.518;AN=56;BaseQRankSum=-0.631;DP=730;FS=3.606;HRun=0;HaplotypeScore=135.3495;InbreedingCoeff=0.6382;MQ=58.18;MQ0=17;MQRankSum=-0.768;QD=4.12;ReadPosRankSum=1.363;VQSLOD=2.9549;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:18,21:40:23.10:413,23,0	1/1:3,5:8:12.04:185,12,0	0/0:41,0:16:2.97:0,3,21	0/1:60,0:19:0:0,0,0	0/0:30,0:32:62.97:0,63,673	0/0:27,0:28:60.58:0,61,612	0/0:21,0:21:21.83:0,22,303	1/1:34,0:32:7.99:51,8,0	0/0:14,0:15:29.37:0,29,304	0/0:38,0:37:50.49:0,50,539	0/0:28,0:28:48.07:0,48,524	1/1:18,0:17:4.99:27,5,0	1/1:15,0:14:2.14:18,2,0	0/0:28,0:28:51.13:0,51,570	0/1:6,13:19:13.42:258,0,13	1/1:7,24:31:16.68:707,17,0	1/1:28,0:27:3.37:19,3,0	1/1:9,0:8:0.15:2,0,0	1/1:24,0:22:4.87:27,5,0	1/1:30,0:28:2.91:24,3,0	1/1:26,0:26:5.95:49,6,0	0/1:28,0:28:0.13:0,0,0	1/1:22,0:22:2.10:22,2,0	0/0:15,0:13:0:0,0,0	0/0:21,0:23:36.18:0,36,365	0/0:25,0:25:51.13:0,51,571	1/1:31,0:30:14.74:124,15,0	0/0:11,0:11:15.04:0,15,172
chr10	52248745	.	TC	T	5060.51	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=17.286;DP=655;FS=4.119;HRun=3;HaplotypeScore=81.4550;InbreedingCoeff=0.9580;MQ=70.24;MQ0=0;MQRankSum=-3.030;QD=32.65;ReadPosRankSum=2.995;VQSLOD=5.3044;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:93.28:0,93,1296	0/0:10,0:10:30.10:0,30,432	0/0:22,0:22:63.19:0,63,852	0/0:21,0:21:41.63:0,42,702	0/0:37,0:37:99:0,108,1535	0/0:24,0:24:72.24:0,72,1036	0/0:20,0:20:57.19:0,57,820	0/0:36,0:36:99:0,105,1480	0/0:25,0:25:75.24:0,75,1061	0/0:26,0:26:75.24:0,75,1052	0/0:21,0:21:63.21:0,63,905	1/1:0,15:15:45.14:555,45,0	1/1:2,20:22:57.18:704,57,0	0/0:16,0:16:48.16:0,48,691	0/0:29,0:29:87.27:0,87,1217	0/0:28,0:27:81.27:0,81,1167	1/1:0,26:26:66.21:818,66,0	1/1:2,24:26:9.03:789,9,0	0/0:20,0:20:57.18:0,57,803	0/0:41,0:41:99:0,117,1668	0/0:15,0:15:42.14:0,42,605	1/1:1,15:16:42.13:521,42,0	1/1:0,29:29:81.25:1004,81,0	1/1:1,20:21:54.17:669,54,0	0/0:21,0:21:60.20:0,60,859	0/0:25,0:25:69.22:0,69,978	0/0:28,0:28:81.26:0,81,1147	0/0:1,0:1:3.01:0,3,43
chr10	52248922	.	G	GGGTTGTT	9450.70	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=9.209;DP=645;FS=0.000;HRun=0;HaplotypeScore=147.7854;InbreedingCoeff=0.9986;MQ=68.75;MQ0=2;MQRankSum=-13.750;QD=64.29;ReadPosRankSum=0.745;VQSLOD=4.9481;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:82.49:0,82,2280	0/0:8,0:8:24.07:0,24,557	0/0:35,0:28:54.24:0,54,981	0/0:22,0:19:41.95:0,42,900	0/0:33,0:33:96.20:0,96,2126	0/0:36,0:36:99:0,105,2330	0/0:14,0:14:42.09:0,42,806	0/0:26,0:26:66.08:0,66,1255	0/0:19,0:19:57.15:0,57,1288	0/0:26,0:26:75.21:0,75,1659	0/0:19,0:19:57.14:0,57,1234	1/1:1,17:18:36.12:1366,36,0	1/1:2,14:19:27.09:1034,27,0	0/0:17,0:17:51.14:0,51,1179	0/0:23,0:23:57.14:0,57,1195	0/0:20,0:19:54.13:0,54,1144	1/1:5,10:19:21.07:698,21,0	1/1:10,5:16:35.94:936,36,0	0/0:31,0:31:84.09:0,84,1618	0/0:32,0:32:90.29:0,90,2202	0/0:21,0:21:60.16:0,60,1357	1/1:3,27:30:78.05:2542,78,0	1/1:8,17:26:48.12:1645,48,0	1/1:5,13:18:36.08:1230,36,0	0/0:20,0:20:60.18:0,60,1360	0/0:21,0:21:57.16:0,57,1179	0/0:27,0:27:69.17:0,69,1476	0/0:12,0:12:36.08:0,36,787
chr10	52250448	.	G	GA	4324.50	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-7.742;DP=623;FS=3.181;HRun=8;HaplotypeScore=65.8795;InbreedingCoeff=0.9765;MQ=89.65;MQ0=0;MQRankSum=-2.424;QD=27.72;ReadPosRankSum=1.625;VQSLOD=5.6331;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:90.04:0,90,823	0/0:9,0:9:23.99:0,24,215	0/0:30,0:31:42.87:0,43,408	0/0:19,0:19:16.26:0,16,328	0/0:21,0:21:54:0,54,488	0/0:17,0:17:48.02:0,48,439	0/0:28,0:28:72.02:0,72,653	0/0:20,0:20:48:0,48,435	0/0:32,0:32:71.99:0,72,652	0/0:23,0:23:66.03:0,66,602	0/0:17,0:17:41.99:0,42,378	1/1:10,12:22:20.66:472,21,0	1/1:8,19:27:72.17:806,72,0	0/0:24,0:24:59.99:0,60,544	0/0:16,0:16:45.02:0,45,412	0/0:32,0:31:90.05:0,90,824	1/1:1,18:20:57.12:635,57,0	1/1:2,8:10:7.52:258,8,0	0/0:24,0:24:66.04:0,66,604	0/0:27,0:27:63.02:0,63,577	0/0:35,0:37:91.09:0,91,802	1/1:2,20:22:63.18:717,63,0	1/1:9,16:25:57.13:623,57,0	1/1:9,21:30:72.17:814,72,0	0/0:15,0:15:39.01:0,39,357	0/0:21,0:21:51.02:0,51,467	0/0:16,0:16:42:0,42,379	0/0:6,0:6:11.99:0,12,110
chr10	52250534	.	CA	C	5757.47	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=14.043;DP=694;FS=8.621;HRun=2;HaplotypeScore=74.5653;InbreedingCoeff=0.9997;MQ=84.36;MQ0=0;MQRankSum=-3.293;QD=34.48;ReadPosRankSum=5.670;VQSLOD=4.6708;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:34:99:0,105,1571	0/0:11,0:11:33.11:0,33,495	0/0:28,0:28:84.26:0,84,1200	0/0:20,0:20:60.17:0,60,808	0/0:33,0:33:99:0,99,1459	0/0:28,0:28:84.27:0,84,1239	0/0:22,0:22:66.22:0,66,988	0/0:24,0:24:63.20:0,63,909	0/0:31,0:31:90.29:0,90,1328	0/0:20,0:20:54.17:0,54,776	0/0:18,0:18:54.17:0,54,791	1/1:0,29:29:81.26:1052,81,0	1/1:1,28:29:75.24:974,75,0	0/0:28,0:28:84.25:0,84,1216	0/0:32,0:32:96.33:0,96,1439	0/0:29,0:28:87.29:0,87,1284	1/1:0,22:22:66.21:857,66,0	1/1:0,12:12:33.11:428,33,0	0/0:23,0:23:66.22:0,66,971	0/0:31,0:31:90.27:0,90,1306	0/0:31,0:31:87.28:0,87,1283	1/1:1,20:21:48.16:623,48,0	1/1:1,21:22:60.19:778,60,0	1/1:2,30:32:42.31:1045,42,0	0/0:27,0:27:81.27:0,81,1197	0/0:26,0:26:78.26:0,78,1143	0/0:21,0:21:63.19:0,63,922	0/0:9,0:9:27.09:0,27,405
chr10	52251380	.	C	CA	8303.92	PASS	AB=0.941;AC=27;AF=0.482;AN=56;BaseQRankSum=-9.466;DP=628;FS=2.212;HRun=8;HaplotypeScore=63.8867;InbreedingCoeff=0.9538;MQ=71.27;MQ0=0;MQRankSum=0.159;QD=28.34;ReadPosRankSum=1.870;VQSLOD=5.3309;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,30:32:81.24:935,81,0	1/1:1,12:13:36.11:415,36,0	0/1:15,0:16:0.55:1,0,47	0/0:17,0:17:10.86:0,11,185	0/0:37,0:39:99:0,107,962	0/0:34,0:34:86.95:0,87,786	0/0:22,0:22:54.02:0,54,494	0/0:38,0:38:86.99:0,87,786	0/0:18,0:18:51.01:0,51,462	0/0:22,0:22:57.02:0,57,521	0/0:31,0:32:83.06:0,83,743	1/1:1,14:16:44.97:499,45,0	1/1:0,14:14:36.11:415,36,0	0/0:18,0:18:48.02:0,48,439	1/1:1,20:21:57.17:658,57,0	1/1:1,24:25:72.21:831,72,0	0/0:23,0:23:59.97:0,60,541	0/0:17,0:17:45.02:0,45,412	1/1:3,19:22:54.13:609,54,0	1/1:2,23:26:75.02:826,75,0	1/1:1,14:15:42.12:485,42,0	1/1:4,14:18:42.12:485,42,0	1/1:4,23:27:14.27:672,14,0	1/1:2,10:12:30.09:343,30,0	0/0:18,0:18:51.03:0,51,467	0/0:23,0:23:60.02:0,60,549	1/1:4,32:36:99:1130,99,0	0/0:13,0:13:39.02:0,39,356
chr10	52254174	.	TA	T	3916.89	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=11.752;DP=588;FS=2.666;HRun=7;HaplotypeScore=59.0481;InbreedingCoeff=0.9986;MQ=77.68;MQ0=0;MQRankSum=-0.381;QD=24.95;ReadPosRankSum=3.434;VQSLOD=4.3563;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:27:81.23:0,81,991	0/0:10,0:10:30.10:0,30,377	0/0:15,0:15:33.10:0,33,410	0/0:16,0:16:33.09:0,33,392	0/0:35,0:35:90.29:0,90,1132	0/0:15,0:15:43.95:0,44,532	0/0:11,0:11:30.10:0,30,377	0/0:24,0:24:69.22:0,69,868	0/0:22,0:22:63.19:0,63,779	0/0:30,0:30:69.22:0,69,868	0/0:25,0:25:69.18:0,69,830	1/1:1,23:24:66.15:673,66,0	1/1:3,24:27:66.14:672,66,0	0/0:17,0:17:48.15:0,48,598	0/0:18,0:18:48.14:0,48,591	0/0:22,0:22:66.21:0,66,830	1/1:0,25:25:69.16:704,69,0	1/1:1,15:16:42.10:429,42,0	0/0:21,0:21:53.77:0,54,677	0/0:33,0:33:62.66:0,63,1076	0/0:8,0:8:21.07:0,21,263	1/1:5,13:18:24.05:245,24,0	1/1:3,26:29:69.16:704,69,0	1/1:2,16:18:48.11:490,48,0	0/0:26,0:26:69.20:0,69,848	0/0:25,0:25:66.20:0,66,818	0/0:17,0:17:45.11:0,45,539	0/0:13,0:13:39.12:0,39,491
chr10	52313109	.	G	GC	8120.17	PASS	AC=52;AF=0.963;AN=54;BaseQRankSum=-2.437;DP=318;FS=0.000;HRun=2;HaplotypeScore=28.8883;InbreedingCoeff=0.5798;MQ=42.08;MQ0=24;MQRankSum=-2.437;QD=26.19;ReadPosRankSum=0.930;VQSLOD=4.2590;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,16:12:33.11:474,33,0	1/1:0,7:7:21.07:295,21,0	0/0:3,0:2:6:0,6,55	./.	1/1:0,4:4:9.03:129,9,0	1/1:0,21:17:39.09:529,39,0	1/1:1,15:7:15.05:216,15,0	1/1:2,6:4:5.94:41,6,0	1/1:0,22:11:30.10:431,30,0	1/1:3,12:14:36.11:499,36,0	1/1:3,9:9:27.09:387,27,0	1/1:0,11:9:27.09:381,27,0	1/1:0,9:5:15.05:215,15,0	1/1:2,15:12:23.99:298,24,0	1/1:3,17:14:33.11:473,33,0	1/1:1,11:8:18.06:258,18,0	1/1:2,11:9:24.08:345,24,0	1/1:0,13:12:27.09:389,27,0	1/1:2,7:4:12.04:173,12,0	1/1:1,13:14:36.12:516,36,0	1/1:0,12:10:27.09:389,27,0	1/1:0,12:12:30.10:431,30,0	1/1:0,7:6:15.05:215,15,0	1/1:3,11:10:21.07:302,21,0	1/1:1,3:4:9.03:129,9,0	1/1:2,8:8:21.07:302,21,0	1/1:0,8:5:15.05:215,15,0	1/1:0,3:2:6.02:86,6,0
chr10	52313352	.	C	CTT	239.92	PASS	AC=4;AF=0.250;AN=16;BaseQRankSum=0.039;DP=246;FS=0.000;HRun=3;HaplotypeScore=13.7515;MQ=11.83;MQ0=202;MQRankSum=-1.518;QD=10.00;ReadPosRankSum=-1.129;VQSLOD=-0.0608;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	0/0:5,0:3:9.03:0,9,126	./.	./.	0/0:12,0:3:6.02:0,6,83	./.	./.	./.	./.	0/0:9,0:3:9.03:0,9,126	0/0:13,0:7:12.04:0,12,168	./.	./.	./.	./.	./.	./.	./.	./.	1/1:2,10:3:9.03:165,9,0	./.	./.	1/1:1,11:6:9.03:164,9,0	./.	0/0:10,0:3:6.02:0,6,84	./.	./.	0/0:4,0:1:3.01:0,3,42
chr10	52392371	.	T	TCC	1238.64	PASS	AC=14;AF=0.259;AN=54;BaseQRankSum=7.009;DP=364;FS=3.169;HRun=1;HaplotypeScore=68.3970;InbreedingCoeff=0.8799;MQ=32.86;MQ0=73;MQRankSum=-0.127;QD=12.14;ReadPosRankSum=3.131;VQSLOD=1.0046;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:14:30.01:0,30,330	0/0:10,0:8:18.05:0,18,223	./.	0/0:6,0:2:3:0,3,25	0/0:15,0:13:12.04:0,12,143	0/0:11,0:11:20.92:0,21,223	0/0:22,0:21:48.06:0,48,542	0/0:20,0:16:48.03:0,48,543	0/0:12,0:12:24.07:0,24,295	0/0:15,0:14:36.09:0,36,420	0/0:12,0:10:23.96:0,24,251	1/1:17,0:15:18.04:207,18,0	1/1:11,0:9:27.03:293,27,0	0/0:13,0:10:15.05:0,15,183	0/0:17,0:13:36.01:0,36,399	0/0:9,0:5:12.02:0,12,128	1/1:23,1:13:30.06:342,30,0	1/1:10,6:11:15.51:182,16,0	0/0:13,0:9:21.06:0,21,255	0/0:14,0:12:21.01:0,21,241	0/0:8,0:5:9.02:0,9,99	1/1:13,0:10:24.01:253,24,0	1/1:2,0:7:8.81:79,9,0	1/1:13,0:10:5.88:68,6,0	0/0:9,0:6:6.02:0,6,72	0/0:11,0:10:27.01:0,27,305	0/0:10,0:10:27.08:0,27,334	0/0:11,0:5:12.04:0,12,143
chr10	52394646	.	AC	A	4171.48	PASS	AB=0.922;AC=28;AF=0.500;AN=56;BaseQRankSum=12.740;DP=521;FS=9.228;HRun=10;HaplotypeScore=82.1320;InbreedingCoeff=0.6790;MQ=76.08;MQ0=0;MQRankSum=-1.897;QD=13.33;ReadPosRankSum=4.439;VQSLOD=3.0777;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:71.86:0,72,701	0/0:10,0:10:20.99:0,21,199	0/1:33,4:27:7.13:7,0,292	0/1:12,1:11:11.03:11,0,89	0/0:13,1:14:2.81:0,3,227	0/0:20,1:21:6.64:0,7,426	0/0:16,0:16:30.01:0,30,300	1/1:6,11:17:19.96:265,20,0	0/0:28,0:28:50.91:0,51,555	0/0:14,0:14:36.08:0,36,389	0/0:8,0:8:21.03:0,21,209	1/1:3,23:26:50.99:442,51,0	1/1:6,14:20:24.19:304,24,0	0/1:17,2:19:6.97:7,0,369	0/0:24,0:24:60.13:0,60,640	0/0:23,0:23:60.09:0,60,619	1/1:1,17:18:44.99:390,45,0	1/1:2,15:17:35.99:312,36,0	1/1:4,21:25:34.89:508,35,0	1/1:3,20:23:53.50:456,54,0	1/1:2,5:7:12:104,12,0	1/1:2,4:6:15.25:114,15,0	1/1:2,20:22:50.99:442,51,0	1/1:6,16:22:47.98:416,48,0	0/1:19,1:20:4:4,0,385	0/0:15,1:16:5.84:0,6,277	1/1:4,17:21:44.98:391,45,0	0/0:2,0:2:3.01:0,3,33
chr10	52395674	.	ATTG	A	6068.18	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=14.918;DP=719;FS=4.811;HRun=0;HaplotypeScore=106.9656;InbreedingCoeff=0.9928;MQ=70.82;MQ0=1;MQRankSum=-2.534;QD=31.77;ReadPosRankSum=5.281;VQSLOD=4.8396;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:69.13:0,69,1364	0/0:18,0:18:42.11:0,42,807	0/0:23,0:22:47.45:0,47,640	0/0:27,0:27:60.66:0,61,1209	0/0:38,0:38:99:0,105,2156	0/0:33,0:33:81.22:0,81,1529	0/0:15,0:15:42.11:0,42,792	0/0:33,0:33:81.26:0,81,1596	0/0:33,0:33:75.26:0,75,1553	0/0:28,0:28:75.23:0,75,1435	0/0:26,0:26:66.23:0,66,1361	1/1:2,25:27:60.20:902,60,0	1/1:4,45:49:99:1488,99,0	0/0:24,0:24:69.22:0,69,1397	0/0:30,0:30:87.28:0,87,1768	0/0:22,0:22:57.20:0,57,1199	1/1:3,16:19:36.12:531,36,0	1/1:0,15:15:42.14:631,42,0	0/0:22,0:22:54.11:0,54,1034	0/0:30,0:30:87.30:0,87,1773	0/0:13,0:13:33.11:0,33,694	1/1:2,32:34:84.07:1163,84,0	1/1:4,18:22:44.96:675,45,0	1/1:4,21:25:45.15:676,45,0	0/0:27,0:27:81.22:0,81,1548	0/0:28,0:28:81.25:0,81,1555	0/0:29,0:28:68.15:0,68,1252	0/0:5,0:5:10.89:0,11,122
chr10	52396838	.	CT	C	7198.56	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=13.338;DP=581;FS=1.425;HRun=7;HaplotypeScore=57.1871;InbreedingCoeff=0.9996;MQ=82.48;MQ0=0;MQRankSum=-0.711;QD=25.80;ReadPosRankSum=1.462;VQSLOD=5.4442;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:72.20:0,72,879	0/0:10,0:10:30.10:0,30,377	0/0:17,0:17:45.03:0,45,509	0/0:15,0:15:39.10:0,39,455	0/0:31,0:31:87.27:0,87,1081	0/0:23,0:23:63.20:0,63,792	0/0:18,0:18:42.13:0,42,528	1/1:9,20:29:60.13:612,60,0	0/0:11,0:11:33.09:0,33,402	0/0:16,0:16:39.12:0,39,488	0/0:24,0:24:72.22:0,72,892	1/1:2,17:19:51.12:520,51,0	1/1:2,10:12:30.07:306,30,0	0/0:23,0:23:66.21:0,66,822	0/0:17,0:17:48.13:0,48,581	0/0:18,0:18:51.14:0,51,627	1/1:3,22:25:66.15:673,66,0	1/1:1,14:15:39.09:398,39,0	1/1:2,16:19:50.15:496,50,0	1/1:2,35:37:96.21:979,96,0	1/1:2,20:22:54.12:551,54,0	1/1:2,19:21:51.11:520,51,0	1/1:1,31:32:81.08:826,81,0	1/1:3,19:22:57.13:582,57,0	0/0:22,0:22:60.19:0,60,755	0/0:22,0:22:63.20:0,63,792	1/1:1,25:26:72.16:735,72,0	0/0:10,0:10:27.09:0,27,340
chr10	52398493	.	G	GTTTCC	12257.90	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-10.149;DP=644;FS=3.624;HRun=0;HaplotypeScore=110.7116;InbreedingCoeff=0.9983;MQ=89.11;MQ0=0;MQRankSum=-7.428;QD=78.58;ReadPosRankSum=3.601;VQSLOD=7.1998;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,105,2196	0/0:10,0:10:30.10:0,30,664	0/0:27,0:27:78.18:0,78,1530	0/0:24,0:23:63.08:0,63,1258	0/0:22,0:22:66.20:0,66,1403	0/0:24,0:24:72.23:0,72,1562	0/0:28,0:28:69.24:0,69,1536	0/0:33,0:33:96.31:0,96,1984	0/0:25,0:25:75.22:0,75,1560	0/0:20,0:20:54.19:0,54,1182	0/0:21,0:21:60.19:0,60,1294	1/1:3,24:30:81.28:2480,81,0	1/1:2,17:20:57.20:1766,57,0	0/0:15,0:15:42.14:0,42,914	0/0:30,0:30:90.31:0,90,1983	0/0:26,0:26:78.22:0,78,1611	1/1:5,9:18:32.82:1065,33,0	1/1:3,10:13:33.11:1054,33,0	0/0:25,0:24:75.24:0,75,1627	0/0:21,0:21:60.21:0,60,1313	0/0:32,0:32:93.27:0,93,1879	1/1:4,19:24:69.24:1966,69,0	1/1:2,25:28:75.21:2240,75,0	1/1:4,19:23:54.18:1687,54,0	0/0:19,0:19:54.19:0,54,1200	0/0:18,0:18:54.18:0,54,1162	0/0:27,0:27:81.28:0,81,1782	0/0:6,0:6:18.06:0,18,401
chr10	52398920	.	CTGAGT	C	987.44	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.020;DP=623;FS=0.935;HRun=0;HaplotypeScore=112.3647;InbreedingCoeff=0.9935;MQ=87.19;MQ0=0;MQRankSum=-3.376;QD=47.02;ReadPosRankSum=0.911;VQSLOD=3.9502;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:57.17:0,57,1686	0/0:12,0:12:36.12:0,36,1142	0/0:20,0:20:48.16:0,48,1404	0/0:22,0:22:66.14:0,66,1829	0/0:31,0:31:93.32:0,93,2889	0/0:30,0:30:81.26:0,81,2496	0/0:20,0:20:57.16:0,57,1619	0/0:31,0:31:84.29:0,84,2512	0/0:16,0:16:45.15:0,45,1381	0/0:32,0:32:96.33:0,96,3047	0/0:25,0:24:72.25:0,72,2284	0/0:14,0:14:42.13:0,42,1195	0/0:36,0:36:99:0,108,3360	0/0:9,0:9:21.07:0,21,664	0/0:28,0:28:81.25:0,81,2387	0/0:16,0:16:45.15:0,45,1409	1/1:0,12:12:33.11:716,33,0	1/1:2,7:9:18.06:391,18,0	0/0:24,0:24:69.23:0,69,2094	0/0:34,0:34:99:0,102,3207	0/0:31,0:31:84.29:0,84,2594	0/0:22,0:22:63.22:0,63,1914	0/0:28,0:28:78.27:0,78,2473	0/0:17,0:17:48.16:0,48,1422	0/0:22,0:22:60.21:0,60,1904	0/0:29,0:29:87.30:0,87,2717	0/0:21,0:21:60.19:0,60,1736	0/0:12,0:12:36.12:0,36,1054
chr10	52400734	.	G	GA	6268.79	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=5.068;DP=557;FS=6.420;HRun=8;HaplotypeScore=64.1313;InbreedingCoeff=0.9984;MQ=72.21;MQ0=1;MQRankSum=-0.662;QD=21.40;ReadPosRankSum=3.094;VQSLOD=5.2011;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:31,0:31:71.13:503,71,0	1/1:1,7:7:21.06:242,21,0	0/0:18,0:15:38.88:0,39,339	0/0:15,0:12:27:0,27,241	0/0:17,0:17:48.03:0,48,439	0/0:20,0:20:54.03:0,54,494	0/0:27,0:27:69.02:0,69,627	0/0:34,0:34:84.02:0,84,762	0/0:19,0:19:48.01:0,48,439	0/0:22,0:22:57.01:0,57,518	0/0:12,0:12:33.02:0,33,302	1/1:24,0:24:65.05:422,65,0	1/1:24,0:23:59.25:409,59,0	0/0:17,0:17:48.03:0,48,439	1/1:2,23:25:57.17:658,57,0	1/1:0,17:17:45.13:519,45,0	1/1:17,0:17:44.14:284,44,0	1/1:14,0:14:38.24:256,38,0	1/1:3,15:18:45.13:519,45,0	1/1:2,15:16:36.07:401,36,0	1/1:2,9:11:21.06:242,21,0	1/1:21,0:21:53.31:361,53,0	1/1:19,0:19:44.46:300,44,0	1/1:16,0:16:38.45:253,38,0	0/0:22,0:22:57.01:0,57,521	0/0:31,0:31:84.04:0,84,769	1/1:3,28:29:78.23:900,78,0	0/0:10,0:10:24.01:0,24,220
chr10	52400736	.	A	AG	6714.32	PASS	AB=1.000;AC=26;AF=0.464;AN=56;BaseQRankSum=2.379;DP=558;FS=7.362;HRun=0;HaplotypeScore=60.8649;InbreedingCoeff=0.7267;MQ=72.42;MQ0=1;MQRankSum=-1.203;QD=22.76;ReadPosRankSum=5.258;VQSLOD=6.1659;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,30:31:72.23:1027,72,0	1/1:8,0:8:16.42:52,16,0	0/0:18,0:15:39.05:0,39,484	0/0:14,0:12:30.06:0,30,364	0/0:16,0:16:48.16:0,48,668	0/0:20,0:20:60.18:0,60,807	0/0:28,0:28:81.21:0,81,1060	0/0:34,0:34:99:0,99,1305	0/0:19,0:19:57.17:0,57,751	0/0:23,0:22:66.20:0,66,880	0/0:12,0:12:36.11:0,36,487	1/1:2,24:26:66.21:965,66,0	1/1:0,24:24:60.20:868,60,0	0/0:17,0:17:51.16:0,51,696	0/1:25,0:25:5.09:85,0,5	1/1:17,0:17:34.41:111,34,0	1/1:0,17:17:45.15:650,45,0	1/1:0,14:14:42.10:571,42,0	0/1:18,0:18:31.71:81,0,32	0/1:17,0:16:29.01:50,0,29	0/1:11,0:11:27.29:38,0,27	1/1:1,21:22:57.13:806,57,0	1/1:0,19:19:48.08:674,48,0	1/1:1,15:16:42.11:582,42,0	0/0:23,0:23:66.15:0,66,865	0/0:29,0:29:87.28:0,87,1199	1/1:30,0:29:15.79:153,16,0	0/0:10,0:10:30.04:0,30,377
chr10	52401357	.	CT	C	7439.98	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=12.935;DP=511;FS=7.474;HRun=9;HaplotypeScore=50.1489;InbreedingCoeff=0.9685;MQ=74.58;MQ0=0;MQRankSum=-0.771;QD=23.62;ReadPosRankSum=1.543;VQSLOD=5.6091;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,19:21:50.06:445,50,0	1/1:1,5:6:12.01:110,12,0	0/0:11,0:11:21.04:0,21,230	0/0:6,0:7:17.84:0,18,179	0/0:21,1:21:23.65:0,24,512	0/0:26,0:25:66.17:0,66,735	0/0:16,0:16:42.12:0,42,485	1/1:3,28:31:75.02:686,75,0	0/0:26,0:26:63.19:0,63,727	0/0:31,1:32:65.80:0,66,1002	0/0:8,0:8:21.06:0,21,242	1/1:3,20:23:54.02:494,54,0	1/1:1,11:12:33.02:302,33,0	0/0:15,0:15:36.11:0,36,415	1/1:2,17:19:51.02:467,51,0	1/1:1,14:15:42.02:384,42,0	1/1:0,24:24:66.04:604,66,0	1/1:2,19:21:45.02:412,45,0	1/1:5,15:20:44.99:406,45,0	1/1:0,17:17:51.03:467,51,0	1/1:2,21:23:57.03:522,57,0	1/1:1,20:21:60.03:549,60,0	1/1:2,17:19:51.03:467,51,0	1/1:0,15:15:45.02:412,45,0	0/0:17,0:16:51.15:0,51,589	0/0:14,0:15:32.15:0,32,410	1/1:2,26:28:78.04:714,78,0	0/0:1,0:1:3.01:0,3,35
chr10	52402496	.	T	TG	5396.51	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-11.395;DP=764;FS=19.760;HRun=2;HaplotypeScore=71.2766;InbreedingCoeff=0.9990;MQ=87.50;MQ0=0;MQRankSum=-7.368;QD=38.55;ReadPosRankSum=3.382;VQSLOD=3.0079;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:58:99:0,159,1971	0/0:14,0:14:42.13:0,42,521	0/0:24,0:24:65.96:0,66,770	0/0:28,0:28:81.22:0,81,972	0/0:29,0:29:84.26:0,84,1040	0/0:17,0:17:51.16:0,51,632	0/0:33,0:33:99:0,99,1213	0/0:27,0:27:78.23:0,78,946	0/0:28,0:28:81.25:0,81,1003	0/0:37,0:37:99:0,108,1339	0/0:22,0:22:63.20:0,63,780	1/1:0,28:28:69.23:993,69,0	1/1:0,31:31:84.28:1209,84,0	0/0:34,0:34:99:0,102,1250	0/0:40,0:40:99:0,114,1373	0/0:31,0:31:87.27:0,87,1078	0/0:27,0:27:81.24:0,81,989	0/0:18,0:18:54.17:0,54,669	0/0:28,0:28:81.25:0,81,1004	0/0:21,0:21:60.16:0,60,728	0/0:30,0:30:87.27:0,87,1078	1/1:1,35:36:99:1468,102,0	1/1:2,20:22:57.19:820,57,0	1/1:1,22:23:63.21:907,63,0	0/0:23,0:23:60.19:0,60,744	0/0:24,0:24:72.23:0,72,893	0/0:24,0:24:72.21:0,72,880	0/0:7,0:7:21.07:0,21,260
chr10	52403534	.	CTG	C	131.52	PASS	AB=0.936;AC=21;AF=0.525;AN=40;BaseQRankSum=2.839;DP=503;FS=5.567;HRun=0;HaplotypeScore=65.0847;InbreedingCoeff=0.2170;MQ=66.29;MQ0=10;MQRankSum=-0.373;QD=0.55;ReadPosRankSum=0.471;VQSLOD=1.0441;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	0/0:11,0:11:6.02:0,6,76	1/1:15,0:14:2.84:14,3,0	0/0:14,0:14:0:0,0,0	./.	0/0:17,0:17:2.83:0,3,24	0/1:23,0:22:7.70:8,0,131	0/0:13,0:13:2.87:0,3,43	1/1:19,3:22:3:31,3,0	1/1:13,0:13:2.80:13,3,0	0/0:9,0:9:5.98:0,6,47	1/1:16,0:23:8.52:42,9,0	./.	0/1:32,10:42:27.96:51,0,28	0/0:4,0:4:2.94:0,3,18	0/0:18,0:17:5.81:0,6,51	1/1:18,0:20:2.84:14,3,0	./.	1/1:15,0:15:0.47:1,0,0	./.	1/1:13,0:13:0.47:1,0,0	0/0:21,0:21:6.02:0,6,71	0/1:16,0:16:15.88:16,0,50	1/1:18,0:18:2.84:31,3,0	1/1:17,0:17:2.27:30,2,0
chr10	52403752	.	AT	A	9175.61	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=12.346;DP=604;FS=0.000;HRun=7;HaplotypeScore=60.6485;InbreedingCoeff=0.9944;MQ=81.42;MQ0=0;MQRankSum=-2.739;QD=25.85;ReadPosRankSum=2.373;VQSLOD=5.4104;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,32:34:93.21:949,93,0	1/1:2,11:13:33.07:337,33,0	0/0:17,0:17:44.13:0,44,518	0/0:16,0:16:19.05:0,19,393	0/0:28,0:28:69.19:0,69,833	0/0:32,0:32:93.24:0,93,1127	0/0:21,0:21:60.18:0,60,743	1/1:4,32:36:96.17:960,96,0	0/0:12,0:12:33.11:0,33,415	0/0:22,0:22:60.18:0,60,735	0/0:27,0:27:72.21:0,72,880	1/1:1,25:26:66.15:673,66,0	1/1:2,20:22:51.12:520,51,0	0/0:16,0:16:48.11:0,48,586	1/1:4,22:26:54.12:551,54,0	1/1:0,19:19:54.12:551,54,0	1/1:3,25:28:69.16:704,69,0	1/1:1,9:10:27.06:275,27,0	1/1:2,17:19:51.11:516,51,0	1/1:3,31:34:87.13:874,87,0	1/1:1,16:17:48.11:490,48,0	1/1:3,20:23:54.12:551,54,0	1/1:2,20:22:51.11:520,51,0	1/1:0,9:9:27.06:275,27,0	0/0:36,0:36:99:0,105,1287	0/0:18,0:18:51.16:0,51,642	1/1:1,16:17:42.09:429,42,0	0/0:4,0:4:12.04:0,12,150
chr10	52404951	.	A	AGT	13952.69	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-10.886;DP=824;FS=18.722;HRun=0;HaplotypeScore=114.4882;InbreedingCoeff=0.9828;MQ=63.94;MQ0=2;MQRankSum=-3.033;QD=29.81;ReadPosRankSum=-0.390;VQSLOD=5.2030;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,26:32:63.21:1009,63,0	1/1:4,0:12:17.84:146,18,0	0/0:25,0:19:15.80:0,16,256	0/0:21,0:19:36.11:0,36,436	0/0:30,0:30:75.22:0,75,906	0/0:22,0:22:48.15:0,48,587	0/0:26,0:26:57.12:0,57,649	1/1:14,35:50:99:1645,108,0	0/0:31,0:31:81.24:0,81,978	0/0:32,0:33:81.06:0,81,940	0/0:26,0:26:66.20:0,66,796	1/1:6,22:28:57.19:925,57,0	1/1:5,24:30:63.21:1016,63,0	0/0:26,0:26:60.18:0,60,723	1/1:20,0:48:85.83:652,86,0	1/1:14,0:33:38.01:558,38,0	0/0:34,0:34:87.26:0,87,1051	0/0:11,0:11:6.07:0,6,280	1/1:11,19:30:60.19:944,60,0	1/1:11,30:43:62.59:1469,63,0	1/1:6,29:35:72.24:1152,72,0	1/1:5,29:34:50.62:1311,51,0	1/1:6,27:34:38.56:1131,39,0	1/1:9,24:35:66.23:1071,66,0	0/0:23,0:23:63.20:0,63,770	0/0:33,0:33:90.27:0,90,1088	1/1:1,22:23:57.19:924,57,0	0/0:15,0:15:42.05:0,42,449
chr10	52405615	.	GT	G	8566.18	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=14.787;DP=628;FS=3.488;HRun=5;HaplotypeScore=65.6777;InbreedingCoeff=0.9998;MQ=81.11;MQ0=0;MQRankSum=-1.627;QD=29.24;ReadPosRankSum=2.595;VQSLOD=5.6140;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,31:32:87.25:987,87,0	0/0:11,0:11:33.11:0,33,451	0/0:19,0:19:45.13:0,45,588	0/0:15,0:15:39.07:0,39,479	0/0:34,0:34:99:0,99,1339	0/0:19,0:19:57.18:0,57,762	0/0:23,0:23:69.22:0,69,928	1/1:2,25:27:69.18:773,69,0	0/0:19,0:19:57.19:0,57,779	0/0:22,0:22:60.19:0,60,808	0/0:11,0:11:30.09:0,30,396	1/1:2,32:34:90.25:1020,90,0	1/1:1,21:22:63.18:714,63,0	0/0:22,0:22:60.19:0,60,807	0/0:25,0:25:75.25:0,75,1024	0/0:24,0:24:69.23:0,69,944	0/0:15,0:15:45.15:0,45,614	0/0:12,0:12:33.11:0,33,449	1/1:0,16:16:42.07:448,42,0	1/1:5,18:23:51.14:578,51,0	1/1:0,24:24:72.21:816,72,0	1/1:0,30:30:81.23:918,81,0	1/1:4,22:26:48.13:544,48,0	1/1:0,26:26:72.21:816,72,0	0/0:28,0:28:84.26:0,84,1119	0/0:26,0:26:72.16:0,72,956	1/1:2,31:33:84.24:950,84,0	0/0:10,0:10:30.10:0,30,410
chr10	52406036	.	CCTT	C	11387.51	PASS	AB=0.576;AC=27;AF=0.482;AN=56;BaseQRankSum=16.055;DP=729;FS=1.406;HRun=0;HaplotypeScore=108.6024;InbreedingCoeff=0.9272;MQ=56.14;MQ0=9;MQRankSum=0.774;QD=31.11;ReadPosRankSum=4.357;VQSLOD=5.4205;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,27:29:57.19:905,57,0	1/1:1,6:7:21.07:330,21,0	0/0:39,0:13:24.58:0,25,456	0/0:49,0:11:17.57:0,18,210	0/0:22,0:22:57.18:0,57,1133	0/0:18,0:18:48.15:0,48,971	0/0:30,0:30:81.21:0,81,1573	1/1:4,16:19:30.06:409,30,0	0/0:22,0:22:56.94:0,57,1015	0/0:35,0:35:99:0,99,1946	0/0:16,0:16:37.48:0,37,849	1/1:3,30:33:72.23:1146,72,0	1/1:3,27:29:66.22:1039,66,0	0/0:19,0:19:57.18:0,57,1187	1/1:9,16:25:75.23:1105,75,0	1/1:11,15:26:72.21:1090,72,0	0/0:27,0:27:74.93:0,75,1504	0/0:31,0:31:87.29:0,87,1843	0/1:5,14:17:6.02:496,0,6	1/1:1,19:20:44.68:703,45,0	1/1:7,40:46:50.91:1032,51,0	1/1:2,20:22:47.91:770,48,0	1/1:4,19:23:38.94:625,39,0	1/1:3,36:39:60.11:932,60,0	0/0:18,0:18:54.15:0,54,963	0/0:28,0:28:81.25:0,81,1588	1/1:0,26:26:51.17:806,51,0	0/0:7,0:7:6.33:0,6,359
chr10	52406122	.	TC	T	1578.54	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=3.489;DP=737;FS=8.417;HRun=5;HaplotypeScore=94.5140;InbreedingCoeff=0.9983;MQ=60.26;MQ0=10;MQRankSum=4.731;QD=27.69;ReadPosRankSum=-0.323;VQSLOD=2.9395;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:41:99:0,108,1413	1/1:0,13:13:39.07:428,39,0	0/0:36,0:17:38.66:0,39,472	0/0:32,0:14:31.65:0,32,392	0/0:25,0:25:69.22:0,69,925	0/0:18,0:18:51.17:0,51,697	0/0:37,0:37:99:0,103,1380	0/0:17,0:13:33.11:0,33,451	0/0:21,0:21:60.19:0,60,803	0/0:24,0:24:60.19:0,60,806	0/0:18,0:18:54.16:0,54,717	0/0:23,0:23:63.21:0,63,857	0/0:38,0:38:99:0,99,1238	0/0:26,0:26:72.24:0,72,982	1/1:2,25:26:72.21:817,72,0	1/1:2,15:17:42.12:477,42,0	0/0:39,0:38:99:0,111,1498	0/0:22,0:22:57.17:0,57,749	0/0:23,0:22:60.18:0,60,799	0/0:23,0:23:60.20:0,60,820	0/0:36,0:36:75.25:0,75,1025	0/0:31,0:31:81.18:0,81,1104	0/0:21,0:21:57.19:0,57,776	0/0:43,0:43:99:0,120,1590	0/0:26,0:26:72.22:0,72,968	0/0:26,0:26:69.19:0,69,909	0/0:24,0:24:60.20:0,60,812	0/0:8,0:8:21.07:0,21,287
chr10	52406861	.	CCTCT	C	2810.45	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=10.598;DP=763;FS=0.518;HRun=0;HaplotypeScore=118.0251;InbreedingCoeff=0.9943;MQ=83.88;MQ0=0;MQRankSum=-3.213;QD=44.61;ReadPosRankSum=1.766;VQSLOD=4.0138;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,114,2973	1/1:2,6:8:15.05:280,15,0	0/0:20,0:20:57.20:0,57,1504	0/0:28,0:28:43.89:0,44,1679	0/0:23,0:23:66.20:0,66,1554	0/0:21,0:21:63.20:0,63,1616	0/0:30,0:30:78.27:0,78,2073	0/0:35,0:35:84.28:0,84,2118	0/0:25,0:25:72.25:0,72,1910	0/0:29,0:29:87.28:0,87,2232	0/0:23,0:23:60.21:0,60,1600	0/0:28,0:28:75.21:0,75,1876	0/0:34,0:34:90.31:0,90,2359	0/0:26,0:26:78.25:0,78,2024	1/1:1,32:33:84.29:1567,84,0	1/1:0,22:22:60.21:1104,60,0	0/0:29,0:29:81.26:0,81,2056	0/0:16,0:16:45.15:0,45,1160	0/0:20,0:20:48.16:0,48,1255	0/0:34,0:34:99:0,99,2634	0/0:41,0:41:99:0,123,3245	0/0:38,0:38:99:0,114,2948	0/0:32,0:32:87.27:0,87,2207	0/0:26,0:26:75.26:0,75,2000	0/0:27,0:27:78.26:0,78,1990	0/0:30,0:30:90.31:0,90,2373	0/0:30,0:30:90.31:0,90,2398	0/0:13,0:13:39.13:0,39,1028
chr10	52408100	.	G	GGA	1765.28	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=7.023;DP=657;FS=5.235;HRun=0;HaplotypeScore=85.6246;InbreedingCoeff=0.9980;MQ=81.14;MQ0=3;MQRankSum=-1.505;QD=43.06;ReadPosRankSum=1.049;VQSLOD=5.4036;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,132,1991	1/1:1,9:9:21.07:392,21,0	0/0:22,0:22:65.70:0,66,935	0/0:27,0:26:35.60:0,36,683	0/0:27,0:27:81.27:0,81,1236	0/0:20,0:20:54.17:0,54,806	0/0:23,0:23:63.20:0,63,943	0/0:21,0:21:60.20:0,60,919	0/0:21,0:21:63.21:0,63,965	0/0:27,0:27:78.26:0,78,1177	0/0:21,0:21:54.65:0,55,827	0/0:24,0:24:72.23:0,72,1067	0/0:36,0:36:99:0,108,1641	0/0:29,0:29:81.26:0,81,1219	1/1:3,19:20:54.19:1008,54,0	1/1:0,9:9:27.09:508,27,0	0/0:29,0:29:87.28:0,87,1307	0/0:20,0:20:60.20:0,60,919	0/0:18,0:18:48.13:0,48,689	0/0:15,0:15:45.15:0,45,689	0/0:22,0:22:66.21:0,66,989	0/0:27,0:27:81.28:0,81,1240	0/0:25,0:25:72.24:0,72,1096	0/0:30,0:30:87.28:0,87,1310	0/0:20,0:20:60.20:0,60,919	0/0:23,0:23:69.23:0,69,1055	0/0:33,0:33:96.33:0,96,1470	0/0:11,0:11:33.11:0,33,500
chr10	52408707	.	T	TTAGA	10754.34	PASS	AB=0.684;AC=44;AF=0.846;AN=52;BaseQRankSum=0.331;DP=749;FS=0.000;HRun=0;HaplotypeScore=183.8743;InbreedingCoeff=0.6397;MQ=72.76;MQ0=3;MQRankSum=-2.156;QD=17.57;ReadPosRankSum=-1.007;VQSLOD=3.8299;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:29,1:32:14.26:288,14,0	1/1:5,2:7:12.02:233,12,0	./.	./.	0/0:34,0:34:36.07:0,36,505	0/1:17,13:30:12.85:639,0,13	1/1:20,3:23:27.09:567,27,0	1/1:40,0:39:11.86:79,12,0	0/0:25,0:25:45.15:0,45,687	1/1:18,8:29:33.10:702,33,0	1/1:18,11:32:30.10:698,30,0	1/1:33,0:33:24.08:426,24,0	1/1:26,0:26:18.06:319,18,0	1/1:15,4:19:15.05:346,15,0	1/1:16,14:31:39.13:910,39,0	1/1:17,15:32:45.15:1049,45,0	1/1:16,8:24:35.15:750,35,0	1/1:15,4:19:27.08:529,27,0	1/1:18,0:19:12.04:231,12,0	1/1:26,1:34:21.07:337,21,0	1/1:18,0:18:6.02:117,6,0	1/1:34,0:34:18.06:285,18,0	1/1:28,0:28:17.66:225,18,0	1/1:24,0:24:8.68:157,9,0	0/0:26,0:26:45.14:0,45,667	1/1:18,5:23:36.12:819,36,0	1/1:26,1:36:42.14:719,42,0	0/1:9,5:17:70.85:329,0,71
chr10	52409771	.	AG	A	6444.93	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=12.696;DP=647;FS=3.707;HRun=6;HaplotypeScore=74.8599;InbreedingCoeff=0.9985;MQ=68.92;MQ0=1;MQRankSum=0.855;QD=26.09;ReadPosRankSum=3.970;VQSLOD=5.4048;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:78.25:0,78,1025	1/1:1,11:12:33.08:355,33,0	0/0:42,1:30:62.96:0,63,627	0/0:28,1:22:20.95:0,21,457	0/0:22,0:22:66.20:0,66,852	0/0:28,0:27:84.26:0,84,1084	0/0:30,0:30:84.27:0,84,1103	0/0:28,0:28:75.19:0,75,952	0/0:26,0:26:75.19:0,75,941	0/0:28,0:28:84.26:0,84,1082	0/0:19,0:19:54.18:0,54,710	1/1:2,31:33:84.08:903,84,0	1/1:1,26:27:66.17:709,66,0	0/0:20,0:20:60.19:0,60,771	1/1:3,27:30:66.17:709,66,0	1/1:2,22:24:60.15:645,60,0	0/0:29,0:29:75.23:0,75,971	0/0:15,0:15:42.09:0,42,526	1/1:3,14:17:42.10:451,42,0	1/1:3,23:26:66.16:709,66,0	1/1:0,17:17:42.11:451,42,0	1/1:0,16:16:39.10:419,39,0	1/1:0,13:13:36.09:387,36,0	1/1:3,11:14:24.06:258,24,0	0/0:22,0:22:63.20:0,63,828	0/0:26,0:26:78.25:0,78,1015	1/1:2,16:18:42.10:450,42,0	0/0:7,0:7:21.07:0,21,276
chr10	52410622	.	C	CCT	2018.49	PASS	AB=1.000;AC=12;AF=0.214;AN=56;BaseQRankSum=1.589;DP=579;FS=2.454;HRun=0;HaplotypeScore=138.9259;InbreedingCoeff=0.5953;MQ=73.17;MQ0=6;MQRankSum=-0.760;QD=9.80;ReadPosRankSum=-2.663;VQSLOD=2.7931;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:27.03:0,27,330	1/1:4,7:10:15.05:244,15,0	0/0:28,0:21:24.02:0,24,260	0/1:39,0:26:16.10:16,0,226	0/0:21,0:21:36.09:0,36,419	0/0:15,0:15:36.09:0,36,419	0/0:18,0:18:32.17:0,32,437	1/1:26,8:31:45.10:650,45,0	0/0:18,0:18:47.94:0,48,562	0/0:15,0:15:30.09:0,30,369	0/0:14,0:14:33.09:0,33,395	0/0:17,0:16:25.47:0,25,375	0/0:24,0:23:43.97:0,44,520	0/0:12,0:12:19.03:0,19,297	1/1:8,16:24:39.13:623,39,0	1/1:8,15:23:31.35:503,31,0	0/0:19,0:18:17.06:0,17,402	0/0:15,0:15:30.09:0,30,369	0/1:17,0:18:38.60:136,0,39	0/1:23,0:24:14.34:14,0,92	0/0:22,0:22:7.57:0,8,67	0/0:24,0:24:43.49:0,43,530	0/0:23,0:23:39.56:0,40,445	0/0:25,0:25:48.14:0,48,576	0/0:22,0:22:34.14:0,34,400	0/0:14,0:14:36.07:0,36,427	0/1:30,0:30:0.96:1,0,332	0/0:9,0:9:16.83:0,17,190
chr10	52410673	.	C	CT	904.01	PASS	AB=0.925;AC=21;AF=0.375;AN=56;BaseQRankSum=7.912;DP=607;FS=41.597;HRun=0;HaplotypeScore=128.7604;InbreedingCoeff=-0.4540;MQ=63.60;MQ0=15;MQRankSum=-6.138;QD=2.18;ReadPosRankSum=-4.280;VQSLOD=0.0587;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:23,1:24:2.37:2,0,500	0/1:6,0:5:4.65:5,0,75	0/0:38,0:21:32.35:0,32,554	0/0:45,1:24:44.30:0,44,583	0/0:7,6:13:9.45:0,9,88	0/1:11,3:13:99:137,0,141	0/1:24,1:25:99:166,0,376	0/1:32,1:33:10.61:11,0,985	0/1:22,2:23:47.24:47,0,397	0/1:18,2:18:89.23:89,0,345	0/1:9,2:10:13.69:14,0,216	0/1:16,3:16:7.08:7,0,344	0/1:23,4:26:99:104,0,458	0/1:17,0:17:99:129,0,179	0/1:16,1:17:47.65:48,0,266	0/1:22,2:24:34.06:34,0,711	0/1:24,5:28:36.24:36,0,566	0/1:16,1:17:9.09:9,0,392	0/0:17,0:17:9.09:0,9,471	0/0:12,1:13:27.09:0,27,377	0/0:26,1:26:6.64:0,7,446	0/0:16,1:17:20.60:0,21,292	0/0:21,1:22:29.68:0,30,454	0/1:30,0:28:24.33:24,0,449	0/1:21,2:22:53.46:53,0,489	0/1:28,2:31:53.09:53,0,812	0/1:21,1:21:42.99:43,0,373	1/1:1,0:1:3.01:48,3,0
chr10	52411533	.	GA	G	6285.58	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=8.628;DP=590;FS=0.000;HRun=8;HaplotypeScore=64.2145;InbreedingCoeff=0.9923;MQ=72.43;MQ0=3;MQRankSum=2.524;QD=21.60;ReadPosRankSum=3.640;VQSLOD=5.1245;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,20:22:48.07:464,48,0	1/1:4,5:9:20.98:193,21,0	0/0:32,0:18:39:0,39,440	0/0:20,0:14:10.08:0,10,135	0/0:20,0:20:60.14:0,60,706	0/0:30,0:30:84.26:0,84,1014	0/0:13,0:13:33.10:0,33,399	1/1:7,16:23:29.50:418,30,0	0/0:20,0:20:60.17:0,60,712	0/0:17,0:17:42.12:0,42,497	0/0:13,0:13:35.98:0,36,385	1/1:3,23:26:54.08:521,54,0	1/1:2,18:20:54.08:520,54,0	0/0:28,1:29:40.21:0,40,747	1/1:4,23:27:51.08:493,51,0	1/1:1,26:27:69.11:666,69,0	0/0:27,0:28:74.58:0,75,866	0/0:22,0:22:56.42:0,56,625	1/1:2,14:16:42.07:406,42,0	1/1:3,25:28:69.11:665,69,0	1/1:3,7:10:21.03:203,21,0	1/1:0,15:15:36.06:348,36,0	1/1:5,19:24:41.95:405,42,0	1/1:0,19:19:51.08:492,51,0	0/0:25,0:25:69.13:0,69,800	0/0:17,0:17:48.15:0,48,580	1/1:2,23:25:51:492,51,0	0/0:13,0:13:39.09:0,39,446
chr10	52412298	.	C	CGGTGGTGGTGGTGGT	2546.49	PASS	AB=0.863;AC=29;AF=0.518;AN=56;BaseQRankSum=7.557;DP=502;FS=7.299;HRun=0;HaplotypeScore=217.3281;InbreedingCoeff=0.6805;MQ=65.39;MQ0=4;MQRankSum=-6.241;QD=11.17;ReadPosRankSum=-4.106;VQSLOD=0.3195;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:20:30.03:469,30,0	1/1:6,0:6:5.99:74,6,0	0/0:22,0:15:23.56:0,24,280	0/1:28,0:26:10.19:10,0,426	0/0:14,0:14:24.07:0,24,725	0/0:25,0:25:32.69:0,33,942	0/0:45,0:45:99:0,108,3147	1/1:9,0:8:12:140,12,0	0/0:26,0:26:69.24:0,69,2201	0/0:30,0:29:42.58:0,43,1348	0/0:12,0:12:17.82:0,18,579	1/1:5,11:22:5.75:299,6,0	1/1:4,11:17:11.86:525,12,0	0/0:32,0:32:63.17:0,63,1733	1/1:16,0:16:33.04:546,33,0	1/1:7,0:7:12.04:236,12,0	0/1:6,0:20:12.38:12,0,140	0/0:3,0:15:15.74:0,16,122	0/1:9,0:7:3.25:34,0,3	1/1:2,0:10:9.41:69,9,0	1/1:20,0:37:3.32:21,3,0	1/1:6,0:6:4.26:53,4,0	1/1:3,0:3:6.02:89,6,0	1/1:8,0:8:5.95:52,6,0	0/0:25,0:25:51.10:0,51,1405	0/0:20,0:19:21.11:0,21,447	1/1:10,0:10:8.22:121,8,0	0/0:7,0:7:12.04:0,12,253
chr10	52413224	.	A	AGGCAAGGGTTTGGCTTCCT	63193.79	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=0.924;DP=659;FS=9.379;HRun=0;HaplotypeScore=286.5822;InbreedingCoeff=0.9993;MQ=80.57;MQ0=0;MQRankSum=-20.570;QD=177.51;ReadPosRankSum=1.471;VQSLOD=3.7921;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:26,10:40:93.32:6194,93,0	1/1:5,3:9:24.08:1989,24,0	0/0:28,0:28:78.24:0,78,3066	0/0:22,0:22:51.09:0,51,1884	0/0:28,0:28:84.27:0,84,3896	0/0:31,0:31:87.30:0,87,4479	0/0:13,0:13:39.13:0,39,1784	1/1:37,0:37:99:5840,111,0	0/0:18,0:18:54.17:0,54,2537	0/0:18,0:18:54.18:0,54,2342	0/0:16,0:16:48.16:0,48,2461	1/1:10,17:28:78.27:5973,78,0	1/1:14,12:37:66.23:5003,66,0	0/0:24,0:24:72.23:0,72,3524	1/1:15,14:31:84.29:7287,84,0	1/1:10,17:33:81.28:6603,81,0	0/0:28,0:28:84.24:0,84,4063	0/0:18,0:18:54.11:0,54,2494	1/1:15,0:22:63.19:3677,63,0	1/1:14,0:17:51.17:3093,51,0	1/1:15,0:15:30.10:2290,30,0	1/1:9,5:18:42.14:3444,42,0	1/1:8,6:18:36.12:2673,36,0	1/1:12,5:21:45.15:3622,45,0	0/0:22,0:22:66.23:0,66,3449	0/0:29,0:29:87.29:0,87,4369	1/1:18,0:30:72.25:5506,72,0	0/0:8,0:8:24.08:0,24,1121
chr10	52413409	.	A	AG	5844.10	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=8.526;DP=536;FS=5.475;HRun=3;HaplotypeScore=64.9414;InbreedingCoeff=0.9955;MQ=76.57;MQ0=0;MQRankSum=-0.538;QD=31.25;ReadPosRankSum=-1.220;VQSLOD=4.1151;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,17:20:39.13:544,39,0	1/1:1,8:9:14.94:184,15,0	0/0:16,0:15:28.25:0,28,330	0/0:13,0:13:24.64:0,25,267	0/0:29,0:29:81.21:0,81,946	0/0:23,0:23:66.19:0,66,778	0/0:10,0:10:30.08:0,30,348	1/1:3,43:46:99:1428,128,0	0/0:11,0:11:30.07:0,30,338	0/0:22,0:22:63.17:0,63,722	0/0:23,0:23:63.13:0,63,703	1/1:2,20:22:51.17:711,51,0	1/1:1,9:10:23.99:309,24,0	0/0:14,0:14:42.10:0,42,481	1/1:2,19:21:48.16:664,48,0	1/1:0,20:20:54.18:749,54,0	0/0:26,0:26:72.12:0,72,827	0/0:21,0:21:60.05:0,60,669	0/0:11,0:11:30.07:0,30,332	0/0:35,0:35:99:0,102,1179	0/0:9,0:9:27.08:0,27,323	1/1:0,8:8:20.77:216,21,0	1/1:4,17:21:54.06:705,54,0	1/1:1,9:10:24.08:335,24,0	0/0:25,0:25:72.21:0,72,855	0/0:19,0:19:54.15:0,54,630	0/0:25,0:25:63.19:0,63,744	0/0:16,0:16:48.15:0,48,574
chr10	52413849	.	TC	T	7545.87	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=17.307;DP=690;FS=9.737;HRun=3;HaplotypeScore=80.9836;InbreedingCoeff=0.9996;MQ=82.57;MQ0=0;MQRankSum=-3.930;QD=32.53;ReadPosRankSum=0.781;VQSLOD=4.5808;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,32:34:75.24:929,75,0	1/1:0,9:9:24.08:297,24,0	0/0:27,0:26:75.22:0,75,1018	0/0:15,0:15:39.10:0,39,537	0/0:34,0:34:90.29:0,90,1277	0/0:33,0:33:99:0,99,1424	0/0:31,0:31:87.29:0,87,1249	1/1:2,33:35:96.29:1176,96,0	0/0:21,0:21:63.21:0,63,907	0/0:25,0:25:72.24:0,72,1036	0/0:17,0:17:47.99:0,48,690	1/1:1,30:31:81.25:1003,81,0	1/1:1,18:19:42.12:520,42,0	0/0:27,0:27:81.27:0,81,1165	1/1:0,18:18:51.16:632,51,0	1/1:0,16:16:48.15:594,48,0	0/0:32,0:32:90.29:0,90,1273	0/0:22,0:22:66.22:0,66,942	0/0:17,0:17:48.16:0,48,690	0/0:33,0:33:95.97:0,96,1342	0/0:25,0:25:69.22:0,69,972	1/1:0,21:21:60.10:723,60,0	1/1:0,20:20:57.18:705,57,0	1/1:1,28:29:78.25:967,78,0	0/0:27,0:27:72.23:0,72,1015	0/0:31,0:31:93.31:0,93,1339	0/0:30,0:30:84.27:0,84,1189	0/0:11,0:11:33.11:0,33,475
chr10	52413979	.	T	TTTTATCATTTTCACCC	31296.64	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-4.257;DP=650;FS=10.707;HRun=0;HaplotypeScore=239.5182;InbreedingCoeff=0.9955;MQ=74.58;MQ0=0;MQRankSum=-16.735;QD=120.84;ReadPosRankSum=-0.724;VQSLOD=3.3569;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,11:29:45.15:3354,45,0	1/1:4,5:13:27.09:1541,27,0	0/0:17,0:17:41.84:0,42,1670	0/0:22,0:23:20.41:0,20,1275	0/0:26,0:26:72.24:0,72,2730	0/0:19,0:19:54.19:0,54,2198	0/0:31,0:31:87.30:0,87,3697	1/1:45,0:45:99:6549,123,0	0/0:24,0:24:66.21:0,66,2751	0/0:21,0:21:54.19:0,54,2106	0/0:14,0:14:36.12:0,36,1501	1/1:12,8:31:57.19:3835,57,0	1/1:11,6:28:48.16:2710,48,0	0/0:22,0:22:66.21:0,66,2834	1/1:7,11:26:45.15:3387,45,0	1/1:8,10:25:45.15:2927,45,0	0/0:26,0:26:69.17:0,69,2946	0/0:20,0:20:57.18:0,57,2353	0/0:28,0:28:81.27:0,81,2918	0/0:12,0:12:33.11:0,33,1416	0/0:18,0:18:48.16:0,48,2025	1/1:5,8:23:39.13:2763,39,0	1/1:13,9:28:49.61:3133,50,0	1/1:2,4:11:15.05:1099,15,0	0/0:25,0:25:66.22:0,66,2805	0/0:25,0:25:69.24:0,69,2808	0/0:29,0:29:72.23:0,72,2918	0/0:11,0:11:17.87:0,18,831
chr10	52413984	.	T	TCA	2296.55	PASS	AB=0.969;AC=10;AF=0.179;AN=56;BaseQRankSum=14.002;DP=610;FS=0.000;HRun=0;HaplotypeScore=128.7133;InbreedingCoeff=-0.2176;MQ=77.48;MQ0=0;MQRankSum=-13.524;QD=11.26;ReadPosRankSum=4.761;VQSLOD=3.4510;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:24:99:229,0,159	0/1:10,0:10:93.56:94,0,142	0/0:20,0:20:57.66:0,58,891	0/0:26,0:24:53.82:0,54,804	0/0:28,0:28:75.25:0,75,1197	0/0:24,0:24:72.23:0,72,1124	0/0:33,0:33:96.33:0,96,1556	0/1:26,21:47:99:1096,0,1016	0/0:25,0:25:75.25:0,75,1198	0/0:22,0:22:60.20:0,60,946	0/0:17,0:17:39.12:0,39,612	0/1:21,0:21:99:136,0,454	0/1:18,0:18:99:100,0,387	0/0:23,0:23:69.22:0,69,1093	0/1:19,0:19:99:188,0,282	0/1:19,0:19:99:163,0,342	0/0:25,0:25:75.26:0,75,1205	0/0:20,0:20:60.19:0,60,954	0/0:26,0:26:75.26:0,75,1224	0/0:13,0:13:39.13:0,39,619	0/0:19,0:19:57.19:0,57,922	0/1:18,0:18:99:194,0,206	0/1:21,0:21:99:160,0,370	0/1:7,0:7:29.73:81,0,30	0/0:23,0:23:69.23:0,69,1102	0/0:25,0:25:72.25:0,72,1166	0/0:26,0:26:78.27:0,78,1261	0/0:11,0:11:17.50:0,17,293
chr10	52414715	.	C	CAT	2001.21	PASS	AB=0.792;AC=11;AF=0.196;AN=56;BaseQRankSum=11.194;DP=548;FS=0.464;HRun=0;HaplotypeScore=149.6622;InbreedingCoeff=0.0152;MQ=70.05;MQ0=0;MQRankSum=-10.147;QD=11.06;ReadPosRankSum=2.208;VQSLOD=3.4816;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:14,4:18:50.40:169,0,50	0/1:6,0:6:8.48:8,0,100	0/0:21,0:22:54.97:0,55,844	0/0:15,0:15:29.80:0,30,356	0/0:21,0:21:60.19:0,60,954	0/0:28,0:28:81.23:0,81,1222	0/0:28,0:28:81.08:0,81,1236	0/1:19,0:20:25.16:118,0,25	0/0:23,0:23:69.21:0,69,1076	0/0:21,0:21:63.18:0,63,918	0/0:18,0:18:51.16:0,51,807	0/1:16,13:30:32.94:446,0,33	0/1:16,7:23:93.07:315,0,93	0/0:19,0:19:57.17:0,57,901	0/1:14,11:25:86.40:350,0,86	0/1:12,5:17:99:174,0,108	0/0:15,0:15:44.94:0,45,697	0/0:12,0:12:36.12:0,36,578	0/0:15,0:15:45.14:0,45,698	0/0:19,0:19:54.17:0,54,854	0/0:27,0:27:78.20:0,78,1196	0/1:11,5:16:5.63:150,0,6	0/1:7,10:17:38.34:290,0,38	1/1:6,3:9:11.61:133,12,0	0/0:26,0:26:78.25:0,78,1205	0/0:23,0:23:69.22:0,69,1077	0/0:21,0:21:60.14:0,60,897	0/0:14,0:14:42.03:0,42,565
chr10	52414716	.	CT	C	1512.43	PASS	AB=0.803;AC=11;AF=0.196;AN=56;BaseQRankSum=14.515;DP=541;FS=12.183;HRun=1;HaplotypeScore=142.5938;InbreedingCoeff=-0.2466;MQ=70.76;MQ0=0;MQRankSum=-12.707;QD=7.64;ReadPosRankSum=0.470;VQSLOD=-0.2502;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:11,6:17:72.61:73,0,222	0/1:4,2:6:89.42:89,0,97	0/0:21,0:21:32:0,32,696	0/0:16,0:16:28:0,28,394	0/0:21,0:21:63.20:0,63,942	0/0:27,0:27:78.21:0,78,1113	0/0:28,0:28:75.23:0,75,1124	0/1:13,5:18:99:146,0,442	0/0:23,0:23:69.22:0,69,1022	0/0:20,0:20:60.19:0,60,879	0/0:17,0:17:51.17:0,51,779	0/1:26,5:31:99:361,0,217	0/1:16,4:20:99:139,0,277	0/0:19,0:19:57.17:0,57,843	0/1:18,7:25:99:284,0,186	0/1:9,8:17:82.50:336,0,83	0/0:16,0:16:43.26:0,43,656	0/0:14,0:14:39.49:0,39,545	0/0:15,0:15:9.96:0,10,114	0/0:19,0:19:46.85:0,47,215	0/0:27,0:27:46.51:0,47,243	0/1:10,6:16:76.03:76,0,108	0/1:15,3:18:55.99:86,0,56	0/1:7,2:9:29.43:50,0,29	0/0:26,0:26:78.25:0,78,1169	0/0:22,0:22:66.21:0,66,959	0/1:21,0:21:20.92:21,0,153	0/0:12,0:12:30.10:0,30,458
chr10	52414717	.	T	TCCCCATCCCCC	14018.17	PASS	AB=0.905;AC=18;AF=0.321;AN=56;BaseQRankSum=12.711;DP=537;FS=8.001;HRun=0;HaplotypeScore=223.8257;InbreedingCoeff=0.7829;MQ=70.54;MQ0=0;MQRankSum=-14.447;QD=78.75;ReadPosRankSum=-1.234;VQSLOD=3.5508;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:13,4:17:99:1024,0,113	1/1:6,0:6:14.61:156,15,0	0/0:21,0:22:31.66:0,32,1104	0/0:13,0:14:24.99:0,25,652	0/0:21,0:21:63.19:0,63,2000	0/0:26,0:26:75.20:0,75,2436	0/0:27,0:27:50.48:0,50,2294	0/1:19,0:19:43.57:973,0,44	0/0:23,0:23:69.20:0,69,2102	0/0:19,0:19:57.15:0,57,1716	0/0:17,0:17:51.16:0,51,1766	1/1:17,14:31:39.16:2757,39,0	1/1:13,7:20:17.47:1822,17,0	0/0:18,0:18:54.19:0,54,1918	1/1:14,10:25:36.14:2504,36,0	1/1:12,5:17:16.19:1513,16,0	0/0:17,0:17:48.04:0,48,1569	0/0:14,0:14:41.77:0,42,1170	0/0:15,0:15:15.19:0,15,900	0/0:18,0:18:51.16:0,51,1264	0/0:27,0:27:56.03:0,56,1824	1/1:11,5:16:22.60:970,23,0	1/1:8,10:18:42.08:1543,42,0	1/1:6,3:9:3.34:755,3,0	0/0:27,0:27:78.18:0,78,2322	0/0:22,0:22:66.20:0,66,2024	0/0:22,0:22:5.82:0,6,1178	0/0:10,0:10:30.10:0,30,962
chr10	52414761	.	AG	A	482.72	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.669;DP=551;FS=0.864;HRun=1;HaplotypeScore=124.3672;InbreedingCoeff=0.8631;MQ=73.39;MQ0=0;MQRankSum=-4.427;QD=24.14;ReadPosRankSum=1.272;VQSLOD=3.6773;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,18:20:45.02:577,45,0	0/0:6,0:6:14.29:0,14,73	0/0:14,0:14:33.85:0,34,444	0/0:11,1:12:5.27:0,5,210	0/0:27,0:27:80.55:0,81,1009	0/0:26,0:26:78.25:0,78,1094	0/0:13,0:13:39.11:0,39,538	0/0:24,0:24:72.23:0,72,998	0/0:21,0:21:63.20:0,63,881	0/0:17,0:17:51.15:0,51,692	0/0:22,0:22:66.22:0,66,940	0/0:36,0:36:79.36:0,79,487	0/0:21,0:21:46.12:0,46,293	0/0:16,0:16:48.15:0,48,665	0/0:29,0:29:42.35:0,42,296	0/0:24,0:24:51.70:0,52,286	0/0:16,0:16:48.10:0,48,624	0/0:18,0:18:54.06:0,54,703	0/0:20,0:20:60.15:0,60,771	0/0:21,0:21:63.17:0,63,845	0/0:15,0:15:45.11:0,45,601	0/0:18,0:18:24.10:0,24,208	0/0:17,0:17:34.12:0,34,321	0/0:12,0:12:26.88:0,27,160	0/0:27,0:27:81.25:0,81,1123	0/0:25,0:25:72.22:0,72,998	0/0:28,0:28:83.65:0,84,1031	0/0:5,0:5:15.05:0,15,212
chr10	52414765	.	AT	A	4720.45	PASS	AB=1.000;AC=18;AF=0.321;AN=56;BaseQRankSum=17.061;DP=539;FS=7.662;HRun=1;HaplotypeScore=97.7822;InbreedingCoeff=0.8721;MQ=71.03;MQ0=0;MQRankSum=-9.695;QD=25.94;ReadPosRankSum=2.069;VQSLOD=4.3383;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:19,0:19:9.91:10,0,22	1/1:0,6:6:18.05:214,18,0	0/0:14,0:14:34.40:0,34,545	0/1:9,0:8:1.57:2,0,147	0/0:26,0:26:78.27:0,78,1245	0/0:26,0:26:78.27:0,78,1240	0/0:15,0:15:45.12:0,45,671	0/0:25,0:25:75.26:0,75,1195	0/0:21,0:21:63.21:0,63,992	0/0:18,0:18:54.18:0,54,842	0/0:24,0:24:72.22:0,72,1102	1/1:3,31:34:93.80:1067,94,0	1/1:2,19:21:48.58:562,49,0	0/0:17,0:17:51.16:0,51,778	1/1:1,27:28:69.68:814,70,0	1/1:0,23:23:66.20:789,66,0	0/0:14,0:14:42.14:0,42,667	0/0:16,0:16:48.16:0,48,762	0/0:20,0:20:60.17:0,60,931	0/0:20,0:20:60.19:0,60,923	0/0:14,0:14:42.11:0,42,618	1/1:2,16:18:50.64:580,51,0	1/1:4,10:14:28.33:324,28,0	1/1:0,10:10:30.09:359,30,0	0/0:29,0:29:87.26:0,87,1317	0/0:25,0:25:75.24:0,75,1157	0/0:27,0:27:81.26:0,81,1266	0/0:6,0:6:15.05:0,15,240
chr10	52415142	.	TAA	T	4464.32	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=4.139;DP=591;FS=5.246;HRun=8;HaplotypeScore=81.5795;InbreedingCoeff=0.9972;MQ=83.18;MQ0=1;MQRankSum=-0.470;QD=29.18;ReadPosRankSum=4.905;VQSLOD=4.8277;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:25:66.09:0,66,633	1/1:1,5:6:15.05:183,15,0	0/0:17,0:17:41.31:0,41,660	0/0:20,0:20:41.94:0,42,633	0/0:35,0:35:93.31:0,93,1540	0/0:22,0:22:54.16:0,54,836	0/0:15,0:15:42.14:0,42,708	0/0:5,0:31:78.09:0,78,740	0/0:16,0:16:42.14:0,42,687	0/0:24,0:24:60.21:0,60,1015	0/0:29,0:29:75.24:0,75,1219	1/1:2,21:23:57.17:695,57,0	1/1:4,23:27:60.19:732,60,0	0/0:20,0:20:60.20:0,60,988	1/1:0,15:14:42.13:512,42,0	1/1:2,17:19:36.11:439,36,0	0/0:25,0:25:72.25:0,72,1205	0/0:16,0:16:42.14:0,42,703	0/0:0,0:13:39.06:0,39,378	0/0:2,0:26:72.12:0,72,699	0/0:3,0:16:36.04:0,36,343	1/1:2,25:27:69.21:842,69,0	1/1:2,18:20:54.17:659,54,0	1/1:1,15:16:33.10:402,33,0	0/0:16,0:16:45.15:0,45,753	0/0:25,0:25:69.24:0,69,1161	0/0:4,0:35:80.98:0,81,781	0/0:12,0:12:33.11:0,33,558
chr10	52415989	.	G	GT	1752.82	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-8.256;DP=706;FS=1.167;HRun=4;HaplotypeScore=69.9267;InbreedingCoeff=0.9917;MQ=93.94;MQ0=0;MQRankSum=-3.583;QD=33.07;ReadPosRankSum=-0.226;VQSLOD=4.0361;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,30:31:84.22:1127,84,0	0/0:16,0:16:45.13:0,45,510	0/0:33,0:33:80.39:0,80,937	0/0:29,0:29:84.19:0,84,917	0/0:24,0:24:72.21:0,72,816	0/0:38,0:38:99:0,108,1204	0/0:25,0:25:72.19:0,72,807	1/1:2,20:22:57.16:748,57,0	0/0:26,0:26:75.20:0,75,841	0/0:24,0:24:66.16:0,66,736	0/0:24,0:24:72.21:0,72,817	0/0:22,0:22:66.19:0,66,749	0/0:33,0:33:96.26:0,96,1078	0/0:24,0:24:69.18:0,69,771	0/0:24,0:24:69.18:0,69,772	0/0:27,0:27:72.20:0,72,817	0/0:26,0:26:75.21:0,75,851	0/0:8,0:8:15.03:0,15,161	0/0:20,0:20:57.15:0,57,638	0/0:37,0:37:96.27:0,96,1089	0/0:30,0:30:90.25:0,90,1013	0/0:34,0:34:96.27:0,96,1089	0/0:27,0:27:72.16:0,72,794	0/0:20,0:20:57.16:0,57,646	0/0:20,0:20:57.16:0,57,647	0/0:26,0:26:72.20:0,72,817	0/0:25,0:25:69.18:0,69,772	0/0:11,0:11:33.09:0,33,374
chr10	52417219	.	T	TTGAC	22410.25	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=6.138;DP=665;FS=20.657;HRun=0;HaplotypeScore=155.4877;InbreedingCoeff=0.9998;MQ=80.81;MQ0=0;MQRankSum=-18.746;QD=66.50;ReadPosRankSum=-0.700;VQSLOD=4.2662;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,19:25:63.11:1604,63,0	1/1:1,11:12:36.12:968,36,0	0/0:24,0:24:62.42:0,62,1077	0/0:26,0:26:66.19:0,66,1123	0/0:25,0:25:72.25:0,72,1361	0/0:15,0:15:39.13:0,39,729	0/0:25,0:25:72.23:0,72,1315	1/1:18,17:35:99:2463,99,0	0/0:20,0:20:57.20:0,57,1076	0/0:25,0:25:72.24:0,72,1326	0/0:15,0:15:36.12:0,36,684	1/1:4,18:21:60.21:1530,60,0	1/1:6,26:32:87.28:2262,87,0	0/0:35,0:35:96.32:0,96,1783	1/1:8,17:25:63.22:1655,63,0	1/1:9,10:18:45.12:1139,45,0	0/0:23,0:23:66.19:0,66,1208	0/0:25,0:25:66.23:0,66,1253	1/1:10,18:27:75.21:1940,75,0	1/1:4,25:29:81.26:2048,81,0	1/1:6,14:20:36.12:939,36,0	1/1:4,17:21:60.21:1600,60,0	1/1:3,23:26:69.24:1826,69,0	1/1:4,11:14:26.94:731,27,0	0/0:30,0:30:90.30:0,90,1678	0/0:29,0:29:84.29:0,84,1568	1/1:6,21:27:66.23:1706,66,0	0/0:11,0:11:33.11:0,33,627
chr10	52417245	.	T	TTGAA	21284.64	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=16.662;DP=675;FS=25.776;HRun=0;HaplotypeScore=161.4049;InbreedingCoeff=0.9998;MQ=65.88;MQ0=0;MQRankSum=-18.611;QD=62.24;ReadPosRankSum=-3.187;VQSLOD=3.1698;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,20:23:57.15:1389,57,0	1/1:5,7:12:36.09:751,36,0	0/0:14,0:14:32.27:0,32,538	0/0:23,0:22:58.41:0,58,952	0/0:30,0:30:84.29:0,84,1621	0/0:16,0:16:42.13:0,42,781	0/0:25,0:25:75.26:0,75,1441	1/1:11,26:42:99:2711,111,0	0/0:26,0:26:78.24:0,78,1438	0/0:28,0:28:81.26:0,81,1509	0/0:13,0:13:39.13:0,39,744	1/1:7,18:24:66.22:1645,66,0	1/1:4,24:29:81.25:2057,81,0	0/0:31,0:31:81.27:0,81,1486	1/1:1,20:23:66.23:1752,66,0	1/1:3,21:24:60.21:1618,60,0	0/0:28,0:28:81.26:0,81,1517	0/0:19,0:19:54.17:0,54,982	1/1:13,17:28:78.27:1916,78,0	1/1:6,18:24:69.19:1674,69,0	1/1:4,15:19:45.02:805,45,0	1/1:4,18:23:69.19:1577,69,0	1/1:3,15:18:48.08:1177,48,0	1/1:4,17:20:35.88:742,36,0	0/0:37,0:37:93.32:0,93,1796	0/0:33,0:33:96.32:0,96,1822	1/1:5,17:25:63.11:1470,63,0	0/0:10,0:10:30.10:0,30,582
chr10	52417370	.	ATGTG	A	494.27	PASS	AB=0.946;AC=12;AF=0.222;AN=54;BaseQRankSum=6.184;DP=709;FS=4.137;HRun=0;HaplotypeScore=163.1054;InbreedingCoeff=0.2785;MQ=54.50;MQ0=5;MQRankSum=-3.687;QD=2.36;ReadPosRankSum=1.905;VQSLOD=2.1792;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:0.70:0,1,21	1/1:16,0:16:5.60:37,6,0	0/0:19,0:15:12.02:0,12,117	0/0:21,0:18:5.45:0,5,34	0/0:25,0:30:38.82:0,39,619	0/1:23,1:24:0.50:1,0,884	0/0:33,0:33:54.14:0,54,914	0/0:24,0:24:1.41:0,1,3	0/0:24,0:27:53.87:0,54,971	0/0:32,0:31:44.61:0,45,698	0/0:23,0:23:46.70:0,47,944	0/0:21,0:21:11.91:0,12,102	0/1:14,0:14:24.66:33,0,25	0/0:36,0:35:57.14:0,57,975	0/0:40,0:39:11.98:0,12,99	1/1:26,0:26:5.46:53,5,0	1/1:11,15:26:21.02:311,21,0	0/1:9,6:15:40.80:131,0,41	./.	0/0:39,0:39:16.80:0,17,105	0/1:35,0:35:0.09:0,0,13	0/1:25,0:25:8.30:8,0,18	0/0:21,0:21:5.99:0,6,50	0/0:23,0:23:3.78:0,4,26	0/0:27,0:29:37.86:0,38,625	0/0:27,0:26:43.70:0,44,630	0/1:28,0:27:19.73:62,0,20	0/0:13,0:13:20.66:0,21,372
chr10	52417377	.	TGTGTGTGTGTGTGTGTGTGTGTGA	T	1524.27	PASS	AB=1.000;AC=12;AF=0.222;AN=54;BaseQRankSum=7.062;DP=707;FS=0.689;HRun=0;HaplotypeScore=365.8403;InbreedingCoeff=0.3119;MQ=53.05;MQ0=7;MQRankSum=-6.171;QD=6.63;ReadPosRankSum=0.267;VQSLOD=1.0116;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:25:24.54:0,25,581	0/1:16,0:16:58.30:121,0,58	0/0:22,0:14:18.06:0,18,437	0/0:24,0:15:15.05:0,15,419	0/0:27,0:27:48.13:0,48,2674	0/0:25,0:25:54.19:0,54,4269	0/0:33,0:33:66.65:0,67,4216	0/1:24,0:24:47.44:47,0,226	0/0:32,0:32:74.50:0,75,5035	0/0:30,0:29:63.19:0,63,4202	0/0:20,0:20:51.16:0,51,3438	0/0:20,0:20:26.98:0,27,353	0/1:14,0:14:60.43:86,0,60	0/0:32,0:31:63.18:0,63,4337	0/0:42,0:41:29.98:0,30,298	0/1:27,0:27:59.03:84,0,59	0/0:26,0:26:27.09:0,27,1637	0/0:14,0:14:27.56:0,28,1330	./.	1/1:10,28:38:32.30:528,32,0	1/1:32,0:32:5.34:106,5,0	0/1:26,0:26:20.95:21,0,92	0/1:21,0:21:19.76:20,0,84	0/0:23,0:23:11.77:0,12,167	0/0:28,0:28:45.54:0,46,2952	0/0:27,0:26:60.21:0,60,4055	1/1:10,22:31:15.05:672,15,0	0/0:12,0:12:21.07:0,21,1073
chr10	52417383	.	TGTGTGTGTGTGTGTGTGA	T	3610.02	PASS	AB=0.715;AC=22;AF=0.407;AN=54;BaseQRankSum=9.733;DP=704;FS=45.224;HRun=0;HaplotypeScore=283.7228;InbreedingCoeff=0.7719;MQ=50.98;MQ0=10;MQRankSum=-7.072;QD=11.95;ReadPosRankSum=0.605;VQSLOD=1.0427;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:32:37.05:0,37,596	1/1:5,10:15:18.39:549,18,0	0/0:23,0:12:9.03:0,9,262	0/0:27,0:12:0.04:0,0,256	0/0:26,0:26:42.13:0,42,2090	0/0:26,0:26:54.19:0,54,3372	0/0:35,0:35:63.20:0,63,3428	1/1:7,17:24:50.93:578,51,0	0/0:34,0:34:71.51:0,72,4026	0/0:26,0:25:60.19:0,60,3299	0/0:21,0:21:51.18:0,51,2773	0/1:17,5:22:35.58:294,0,36	1/1:3,10:13:8.15:295,8,0	0/0:30,0:29:51.17:0,51,3275	0/1:15,25:39:0.53:276,0,1	1/1:4,21:25:12.04:442,12,0	0/0:25,0:25:30.10:0,30,1253	0/0:14,0:14:27.02:0,27,949	./.	1/1:36,0:36:10.97:62,11,0	1/1:30,0:30:8.18:55,8,0	1/1:5,21:26:10.70:341,11,0	1/1:5,17:22:8.71:217,9,0	1/1:21,0:21:11.57:126,12,0	0/0:29,0:29:45.57:0,46,2405	0/0:27,0:26:57.20:0,57,3042	1/1:28,0:27:9.97:376,10,0	0/0:11,0:11:10.55:0,11,830
chr10	52417399	.	TGA	T	1692.47	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=11.159;DP=671;FS=26.719;HRun=0;HaplotypeScore=131.5508;InbreedingCoeff=0.8088;MQ=50.85;MQ0=14;MQRankSum=-5.385;QD=5.51;ReadPosRankSum=-2.828;VQSLOD=0.7150;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:27:49.76:389,50,0	1/1:12,0:12:17.61:106,18,0	0/0:30,0:9:13.94:0,14,123	0/0:38,0:15:12.44:0,12,186	0/0:22,0:22:2.25:0,2,428	0/0:29,0:29:56.14:0,56,860	0/0:30,3:33:65.46:0,65,914	1/1:17,0:17:50.73:389,51,0	0/0:39,0:39:90.17:0,90,1144	0/0:30,0:28:32.81:0,33,838	0/0:20,0:20:35.52:0,36,700	1/1:18,2:19:22.92:155,23,0	1/1:11,1:12:11.83:85,12,0	0/0:27,0:26:51.07:0,51,861	1/1:28,0:27:14.71:90,15,0	1/1:23,0:23:14.67:88,15,0	0/0:26,0:26:6.73:0,7,189	0/1:15,0:15:19.21:19,0,163	1/1:3,0:1:2.97:20,3,0	1/1:29,2:32:5.88:37,6,0	1/1:28,0:28:24.79:184,25,0	1/1:23,0:23:11.77:73,12,0	1/1:19,0:19:8.80:53,9,0	1/1:22,0:21:20.69:161,21,0	0/0:26,1:28:50.84:0,51,654	0/0:31,0:30:15.74:0,16,735	1/1:23,0:22:8.75:58,9,0	0/0:10,0:10:16.27:0,16,282
chr10	52417731	.	AT	A	8234.57	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=16.415;DP=663;FS=0.949;HRun=9;HaplotypeScore=88.4903;InbreedingCoeff=0.9898;MQ=71.74;MQ0=0;MQRankSum=-5.469;QD=23.33;ReadPosRankSum=0.837;VQSLOD=5.3499;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,15:15:39.02:357,39,0	1/1:1,10:11:30.01:275,30,0	0/0:14,0:14:8.17:0,8,321	0/0:14,0:14:26.96:0,27,264	0/0:32,0:32:86.92:0,87,971	0/0:25,0:25:72.21:0,72,831	0/0:19,0:19:51.15:0,51,588	1/1:4,27:32:80.06:715,80,0	0/0:19,0:20:60.01:0,60,672	0/0:46,2:48:74.42:0,74,1344	0/0:28,0:28:81.22:0,81,918	1/1:1,22:23:63.03:576,63,0	1/1:2,25:27:63.02:576,63,0	0/0:24,0:24:66.19:0,66,754	1/1:4,32:36:93.03:851,93,0	1/1:1,23:24:66.04:604,66,0	0/0:15,0:15:45.13:0,45,519	0/0:10,0:10:24.07:0,24,277	1/1:2,17:19:51.02:465,51,0	1/1:4,33:38:99:906,99,0	1/1:5,22:27:57.02:522,57,0	1/1:3,29:32:87.04:796,87,0	1/1:3,19:22:51.03:467,51,0	1/1:3,18:21:51.03:466,51,0	0/0:22,0:22:63.19:0,63,727	0/0:31,0:31:78.20:0,78,880	1/1:1,25:26:72.04:659,72,0	0/0:8,0:8:24.07:0,24,277
chr10	52417848	.	T	TG	673.15	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.612;DP=727;FS=3.126;HRun=1;HaplotypeScore=175.5867;InbreedingCoeff=0.9943;MQ=73.70;MQ0=0;MQRankSum=-3.935;QD=29.27;ReadPosRankSum=-1.384;VQSLOD=3.0467;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,20:23:55.83:768,56,0	0/0:8,0:8:21.07:0,21,272	0/0:33,0:31:84.23:0,84,1068	0/0:21,0:21:51.15:0,51,642	0/0:34,0:34:99:0,99,1285	0/0:31,0:31:90.29:0,90,1167	0/0:21,0:21:60.20:0,60,779	0/0:41,0:41:99:0,111,1390	0/0:28,0:28:84.25:0,84,1061	0/0:33,0:33:96.30:0,96,1223	0/0:22,0:22:66.19:0,66,830	0/0:28,0:28:81.16:0,81,987	0/0:24,0:24:72.23:0,72,936	0/0:29,0:29:84.27:0,84,1083	0/0:40,0:40:99:0,111,1381	0/0:27,0:27:78.11:0,78,938	0/0:20,0:19:41.53:0,42,525	0/0:10,0:10:27.06:0,27,333	0/0:18,0:18:54.15:0,54,682	0/0:32,0:32:96.31:0,96,1244	0/0:21,0:21:48.16:0,48,621	0/0:26,0:26:75.16:0,75,934	0/0:29,0:29:73.77:0,74,921	0/0:17,0:17:29.83:0,30,388	0/0:27,0:27:81.26:0,81,1052	0/0:43,0:43:99:0,126,1621	0/0:29,0:29:81.13:0,81,1026	0/0:12,0:12:36.07:0,36,432
chr10	52417862	.	T	TTG	2860.66	PASS	AB=0.889;AC=27;AF=0.482;AN=56;BaseQRankSum=11.610;DP=850;FS=0.381;HRun=0;HaplotypeScore=251.5116;InbreedingCoeff=0.9115;MQ=60.54;MQ0=4;MQRankSum=-11.090;QD=6.61;ReadPosRankSum=-1.396;VQSLOD=2.9149;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:28,1:31:0.32:32,0,0	1/1:7,0:8:11.72:105,12,0	0/0:41,0:28:36.08:0,36,418	0/0:31,0:19:29.97:0,30,343	0/0:35,0:35:93.26:0,93,1103	0/0:30,0:32:59.99:0,60,770	0/0:25,0:25:57.15:0,57,668	1/1:28,6:35:57.15:911,57,0	0/0:33,0:33:69.18:0,69,810	0/0:41,0:41:92.55:0,93,1065	0/0:24,0:24:63.17:0,63,742	1/1:30,0:29:13.19:66,13,0	1/1:31,0:32:33.37:301,33,0	0/0:37,0:38:99:0,102,1150	1/1:45,0:46:28.33:196,28,0	1/1:35,0:34:23.50:156,23,0	0/0:23,0:23:38.93:0,39,368	0/0:10,0:10:21.06:0,21,251	1/1:26,0:27:39.99:318,40,0	1/1:40,0:41:35.66:265,36,0	1/1:21,0:21:5.82:34,6,0	1/1:39,0:39:19.09:178,19,0	1/1:33,0:34:17.13:123,17,0	1/1:21,0:22:5.94:50,6,0	0/0:28,0:28:81.04:0,81,959	0/0:44,0:44:99:0,105,1260	1/1:30,0:31:45.83:348,46,0	0/0:12,0:12:7.41:0,7,325
chr10	52417883	.	T	TGA	517.66	PASS	AB=1.000;AC=10;AF=0.179;AN=56;BaseQRankSum=2.908;DP=839;FS=2.684;HRun=0;HaplotypeScore=259.3582;InbreedingCoeff=0.2989;MQ=46.73;MQ0=18;MQRankSum=-3.620;QD=2.63;ReadPosRankSum=0.899;VQSLOD=2.2711;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:25.98:0,26,165	0/1:8,0:8:15.24:15,0,25	0/0:46,0:16:27.02:0,27,278	0/0:40,0:20:38.14:0,38,470	0/0:35,0:35:86.70:0,87,918	0/0:33,0:33:84.13:0,84,929	0/0:24,0:24:60.02:0,60,660	0/0:36,0:36:55.43:0,55,333	0/0:28,0:28:74.99:0,75,797	0/0:37,0:37:93.14:0,93,1025	0/0:21,0:21:48.07:0,48,533	0/0:27,0:25:30.13:0,30,174	0/1:35,0:35:31.80:32,0,115	0/0:36,0:36:92.94:0,93,1013	0/0:39,0:39:18.13:0,18,151	0/0:35,0:34:28.27:0,28,224	1/1:6,17:23:29.73:430,30,0	1/1:7,0:7:14.95:140,15,0	0/1:22,0:22:11.39:11,0,79	0/1:31,0:31:8.45:8,0,98	0/0:17,0:17:0.31:0,0,1	0/0:37,0:37:19.01:0,19,167	0/1:35,0:35:15.33:15,0,49	0/0:28,0:28:0.47:0,0,1	0/0:28,0:28:60.11:0,60,673	0/0:49,0:49:99:0,102,1152	0/1:36,0:34:14.32:14,0,235	0/0:12,0:13:32.83:0,33,318
chr10	52417884	.	G	GTGT	1731.03	PASS	AB=0.838;AC=17;AF=0.304;AN=56;BaseQRankSum=12.851;DP=800;FS=12.166;HRun=0;HaplotypeScore=248.8571;InbreedingCoeff=0.6795;MQ=47.10;MQ0=18;MQRankSum=-10.926;QD=6.44;ReadPosRankSum=4.021;VQSLOD=1.0911;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:26.62:0,27,146	1/1:6,0:8:17.05:124,17,0	0/0:46,0:16:48.15:0,48,769	0/0:39,0:20:56.73:0,57,883	0/0:35,0:35:99:0,102,1807	0/0:34,0:34:99:0,99,1778	0/0:24,0:24:66.02:0,66,1189	0/0:36,0:36:93.09:0,93,1056	0/0:29,0:29:84.29:0,84,1554	0/0:36,0:36:99:0,105,1874	0/0:21,0:21:60.21:0,60,1107	1/1:22,2:23:2.92:138,3,0	0/1:25,7:33:26.79:433,0,27	0/0:36,0:36:99:0,108,1930	1/1:26,8:35:38.10:316,38,0	1/1:31,4:34:42.50:288,43,0	0/0:21,0:21:31.87:0,32,253	0/0:7,0:7:21:0,21,266	0/1:15,0:18:58.45:58,0,173	0/1:24,0:29:1.88:2,0,118	0/0:12,0:16:2.53:0,3,8	1/1:26,6:33:35.23:277,35,0	1/1:17,14:31:21.30:208,21,0	1/1:19,3:22:6:74,6,0	0/0:27,0:27:81.23:0,81,1400	0/0:47,0:47:99:0,132,2295	0/0:29,0:32:4.48:0,4,307	0/0:13,0:13:39.12:0,39,653
chr10	52417885	.	A	AT	276.04	PASS	AB=0.823;AC=12;AF=0.214;AN=56;BaseQRankSum=8.067;DP=793;FS=14.669;HRun=0;HaplotypeScore=230.0101;InbreedingCoeff=-0.1118;MQ=47.00;MQ0=19;MQRankSum=-8.263;QD=0.96;ReadPosRankSum=0.287;VQSLOD=1.3284;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:22.94:0,23,89	0/1:5,2:7:12.41:12,0,21	0/0:45,0:15:42.14:0,42,565	0/0:39,0:20:59.68:0,60,711	0/0:33,0:33:96.30:0,96,1317	0/0:35,0:35:92.81:0,93,1324	0/0:24,0:24:62.92:0,63,870	0/0:37,0:36:84.90:0,85,757	0/0:29,0:29:87.27:0,87,1184	0/0:36,0:36:99:0,108,1446	0/0:21,0:21:60.20:0,60,837	0/0:22,3:23:12.52:0,13,175	0/1:24,8:32:89.40:89,0,133	0/0:37,0:37:99:0,105,1446	0/1:26,9:35:51.59:52,0,115	0/1:30,4:33:0.50:0,0,161	0/0:21,0:21:29.42:0,29,234	0/0:7,0:7:21.02:0,21,247	0/1:14,3:17:74.36:74,0,87	0/1:24,5:29:56.51:57,0,61	1/1:12,4:16:0.93:4,1,0	0/1:26,7:33:13.27:13,0,160	0/1:16,14:30:39.99:44,0,40	0/1:19,3:22:9.14:14,0,9	0/0:27,0:27:81.24:0,81,1092	0/0:45,0:45:99:0,135,1852	0/1:29,5:32:55.41:55,0,147	0/0:13,0:13:38.85:0,39,497
chr10	52417891	.	AGAGAGTGT	A	2611.29	PASS	AB=0.844;AC=20;AF=0.357;AN=56;BaseQRankSum=14.392;DP=797;FS=5.006;HRun=0;HaplotypeScore=301.0329;InbreedingCoeff=0.6155;MQ=46.44;MQ0=20;MQRankSum=-12.917;QD=7.64;ReadPosRankSum=1.718;VQSLOD=1.2394;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:25:39.91:40,0,57	1/1:5,2:7:9.14:48,9,0	0/0:46,0:14:41.50:0,42,1181	0/0:40,0:20:49.66:0,50,1665	0/0:32,0:32:96.32:0,96,3368	0/0:34,0:34:99:0,99,3496	0/0:26,0:26:75.25:0,75,2670	1/1:15,0:37:48.78:518,49,0	0/0:31,0:31:93.28:0,93,3286	0/0:39,0:39:99:0,108,3918	0/0:21,0:21:57.06:0,57,1884	1/1:19,7:25:10.65:358,11,0	1/1:22,10:33:9.26:576,9,0	0/0:35,0:35:99:0,105,3900	1/1:28,10:37:39.19:313,39,0	1/1:20,13:32:24.56:398,25,0	0/0:22,0:22:35.21:0,35,1102	0/0:7,0:7:15.05:0,15,366	0/1:16,0:18:70.49:70,0,143	0/1:21,0:29:11.59:12,0,385	0/0:13,0:18:2.57:0,3,29	1/1:25,7:33:37.46:212,37,0	1/1:18,11:29:10.78:86,11,0	0/0:5,16:21:0.46:0,0,1	0/0:24,0:24:69.23:0,69,2574	0/0:45,0:44:99:0,132,4825	0/1:23,1:29:99:179,0,413	0/0:14,0:14:42.14:0,42,1291
chr10	52417895	.	AGT	A	1348.69	PASS	AB=0.974;AC=21;AF=0.375;AN=56;BaseQRankSum=6.930;DP=793;FS=10.142;HRun=0;HaplotypeScore=238.0530;InbreedingCoeff=0.2270;MQ=47.37;MQ0=20;MQRankSum=-4.569;QD=3.07;ReadPosRankSum=-5.464;VQSLOD=0.2544;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:18,7:24:22.77:180,23,0	0/1:8,0:8:0.51:17,0,1	0/0:45,0:14:30.06:0,30,380	0/0:43,0:23:45.53:0,46,575	0/1:30,1:31:1.02:1,0,870	0/0:32,1:33:6.11:0,6,952	0/0:28,0:28:61.43:0,61,843	1/1:30,0:29:50.75:393,51,0	0/1:27,2:29:3.22:3,0,828	0/0:38,1:39:57.11:0,57,1242	0/0:19,0:19:17.44:0,17,552	0/1:27,0:25:30.31:47,0,30	0/1:34,0:34:7.55:115,0,8	0/0:36,0:36:50.96:0,51,1173	0/1:37,0:37:18.64:47,0,19	0/1:35,0:34:16.64:69,0,17	0/1:20,1:21:3.23:3,0,283	0/0:8,0:8:5.81:0,6,47	1/1:16,0:16:30.37:205,30,0	0/1:29,2:31:9.81:166,0,10	1/1:18,0:18:0.74:20,1,0	0/1:35,0:36:19.91:75,0,20	0/1:28,0:29:8.08:8,0,9	0/0:22,0:22:3.63:0,4,14	0/0:23,0:23:54.14:0,54,792	0/0:43,0:42:99:0,99,1520	1/1:30,1:30:18.68:173,19,0	0/0:14,0:14:15.73:0,16,343
chr10	52418049	.	TTG	T	13234.75	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=16.132;DP=725;FS=13.057;HRun=0;HaplotypeScore=92.7604;InbreedingCoeff=0.9995;MQ=82.63;MQ0=1;MQRankSum=-7.710;QD=36.16;ReadPosRankSum=1.248;VQSLOD=5.9167;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,17:18:51.17:700,51,0	1/1:1,10:11:30.10:412,30,0	0/0:21,0:21:53.54:0,54,881	0/0:25,0:25:69.24:0,69,1164	0/0:29,0:29:84.27:0,84,1440	0/0:34,0:34:96.30:0,96,1625	0/0:20,0:20:51.17:0,51,901	1/1:3,27:30:81.27:1110,81,0	0/0:27,0:27:78.27:0,78,1374	0/0:33,0:33:99:0,99,1724	0/0:24,0:24:69.24:0,69,1216	1/1:1,21:20:51.17:700,51,0	1/1:0,35:34:87.29:1195,87,0	0/0:36,0:36:99:0,105,1846	1/1:1,33:33:90.30:1236,90,0	1/1:1,29:30:81.27:1113,81,0	0/0:25,0:25:75.26:0,75,1303	0/0:11,0:11:27.09:0,27,466	1/1:0,23:23:69.21:917,69,0	1/1:0,29:29:84.28:1154,84,0	1/1:2,28:30:84.28:1154,84,0	1/1:3,25:28:66.13:864,66,0	1/1:2,30:32:84.28:1153,84,0	1/1:0,15:15:42.14:577,42,0	0/0:26,0:26:75.26:0,75,1325	0/0:39,0:39:99:0,111,1918	1/1:2,27:26:69.23:948,69,0	0/0:9,0:9:24.08:0,24,426
chr10	52418468	.	GC	G	1367.41	PASS	AB=0.687;AC=16;AF=0.286;AN=56;BaseQRankSum=16.416;DP=662;FS=4.014;HRun=1;HaplotypeScore=162.0366;InbreedingCoeff=0.0242;MQ=53.82;MQ0=5;MQRankSum=-12.202;QD=4.51;ReadPosRankSum=8.403;VQSLOD=0.1850;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:14,5:19:42.50:48,0,43	0/1:5,4:9:10.75:51,0,11	0/0:37,0:26:75.22:0,75,1091	0/0:27,0:17:48.16:0,48,744	0/0:30,0:29:74.89:0,75,1063	0/0:29,0:29:84.29:0,84,1323	0/0:34,0:34:99:0,99,1553	0/1:18,11:28:71.98:91,0,72	0/0:24,0:24:72.25:0,72,1146	0/0:24,0:24:72.24:0,72,1120	0/0:21,0:21:56.35:0,56,806	0/1:7,15:22:8.75:115,0,9	0/1:7,19:26:19.75:123,0,20	0/0:22,0:22:66.21:0,66,1031	1/1:6,18:24:25.89:205,26,0	0/1:9,14:23:7.15:137,0,7	0/0:27,0:27:75.25:0,75,1184	0/0:19,0:19:57.02:0,57,846	0/1:9,4:12:11.21:84,0,11	0/1:15,18:33:40.15:159,0,40	0/1:7,6:13:23.85:24,0,38	0/1:9,5:14:43.33:58,0,43	0/1:14,13:27:89.80:114,0,90	0/1:9,5:14:3.99:24,0,4	0/0:33,0:33:90.30:0,90,1395	0/0:23,0:23:66.22:0,66,1026	1/1:12,24:37:8.71:303,9,0	0/0:9,0:9:24.07:0,24,363
chr10	52418470	.	TGC	T	2524.45	PASS	AB=0.718;AC=22;AF=0.393;AN=56;BaseQRankSum=17.512;DP=655;FS=5.234;HRun=0;HaplotypeScore=168.7100;InbreedingCoeff=0.5254;MQ=51.07;MQ0=5;MQRankSum=-13.208;QD=8.44;ReadPosRankSum=7.053;VQSLOD=2.7964;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:14,4:18:25.55:72,0,26	0/1:5,4:9:4.30:82,0,4	0/0:35,0:23:69.20:0,69,1213	0/0:25,0:14:39.13:0,39,768	0/0:29,0:28:65.94:0,66,1113	0/0:29,0:29:84.29:0,84,1632	0/0:37,0:37:99:0,108,1976	0/1:19,11:30:23.70:202,0,24	0/0:24,0:24:72.25:0,72,1455	0/0:24,0:24:69.23:0,69,1316	0/0:20,0:20:53.72:0,54,841	1/1:6,15:21:27.37:239,27,0	1/1:8,19:27:15.58:257,16,0	0/0:22,0:22:66.23:0,66,1333	1/1:5,18:23:48.41:331,48,0	1/1:9,14:23:28.49:283,28,0	0/0:27,0:27:75.25:0,75,1461	0/0:19,0:19:57.01:0,57,1040	1/1:9,4:12:3.34:138,3,0	1/1:13,18:31:24.15:308,24,0	0/1:7,6:13:15.85:26,0,16	0/1:10,5:15:26.31:109,0,26	0/1:11,13:25:26.81:150,0,27	1/1:8,5:13:4.50:52,4,0	0/0:34,0:34:90.29:0,90,1645	0/0:23,0:23:63.16:0,63,1142	1/1:13,23:37:32.52:474,33,0	0/0:8,0:8:24.08:0,24,463
chr10	52418478	.	TTGC	T	5681.46	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=16.316;DP=612;FS=1.767;HRun=0;HaplotypeScore=161.0012;InbreedingCoeff=0.9876;MQ=46.38;MQ0=7;MQRankSum=-13.195;QD=19.46;ReadPosRankSum=1.366;VQSLOD=5.0151;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,12:19:15.05:206,15,0	1/1:2,8:10:20.74:249,21,0	0/0:28,0:16:26.73:0,27,264	0/0:27,0:13:21.05:0,21,290	0/0:20,0:19:24.05:0,24,377	0/0:25,0:25:44.86:0,45,623	0/0:31,0:31:69.18:0,69,1202	1/1:16,13:28:50.25:391,50,0	0/0:24,0:24:60.13:0,60,1073	0/0:23,0:23:42.05:0,42,736	0/0:18,0:18:21.03:0,21,284	1/1:7,14:21:59.44:653,59,0	1/1:8,19:27:60.22:721,60,0	0/0:22,0:22:36.10:0,36,658	1/1:6,17:23:59.96:715,60,0	1/1:7,15:22:47.97:592,48,0	0/0:25,0:25:63.17:0,63,1190	0/0:17,0:17:41.61:0,42,588	1/1:10,5:13:14.99:150,15,0	1/1:23,6:29:47.86:494,48,0	1/1:12,0:12:14.60:91,15,0	1/1:6,10:16:20.98:231,21,0	1/1:15,8:23:23.94:246,24,0	1/1:12,1:13:17.74:127,18,0	0/0:30,0:30:53.92:0,54,741	0/0:22,0:22:42.08:0,42,692	1/1:14,18:32:77.77:814,78,0	0/0:8,0:8:17.02:0,17,243
chr10	52419238	.	GA	G	694.36	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.898;DP=627;FS=9.092;HRun=4;HaplotypeScore=91.5844;InbreedingCoeff=0.9779;MQ=83.73;MQ0=0;MQRankSum=0.876;QD=21.04;ReadPosRankSum=-3.411;VQSLOD=1.7357;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:60.20:0,60,838	0/0:5,0:5:15.05:0,15,210	0/0:27,0:27:61.02:0,61,858	0/0:15,0:15:19.56:0,20,246	0/0:28,0:28:72.22:0,72,974	0/0:24,0:24:72.22:0,72,988	0/0:18,0:18:54.16:0,54,723	1/1:6,27:33:80.22:789,80,0	0/0:25,0:25:75.25:0,75,1049	0/0:21,0:21:60.20:0,60,840	0/0:16,0:16:42.11:0,42,552	0/0:26,0:26:75.25:0,75,1048	0/0:31,0:31:90.27:0,90,1224	0/0:21,0:21:57.15:0,57,741	0/0:26,0:26:78.26:0,78,1091	0/0:29,0:29:84.28:0,84,1174	0/0:22,0:22:66.21:0,66,907	0/0:13,0:13:39.13:0,39,544	0/0:17,0:17:51.16:0,51,697	0/0:23,0:23:63.20:0,63,863	0/0:10,0:10:27.05:0,27,356	0/0:24,0:24:72.23:0,72,985	0/0:35,0:34:99:0,105,1437	0/0:16,0:16:45.15:0,45,630	0/0:23,0:23:69.23:0,69,956	0/0:28,0:28:84.25:0,84,1115	0/0:34,0:33:96.32:0,96,1341	0/0:14,0:14:42.05:0,42,561
chr10	52419726	.	CTCTTTGTT	C	5305.03	PASS	AB=0.929;AC=15;AF=0.268;AN=56;BaseQRankSum=4.383;DP=688;FS=20.299;HRun=0;HaplotypeScore=221.1721;InbreedingCoeff=0.3381;MQ=72.89;MQ0=3;MQRankSum=-2.949;QD=19.50;ReadPosRankSum=-1.337;VQSLOD=2.2381;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:43:99:260,0,1527	0/1:0,0:14:20.22:20,0,66	0/0:29,0:23:53.45:0,53,1182	0/0:46,0:41:99:0,113,2449	0/0:28,0:28:81.13:0,81,2557	0/0:24,0:24:72.16:0,72,2401	0/0:24,0:24:72.07:0,72,2216	0/1:34,0:33:99:350,0,546	0/0:23,0:23:66.19:0,66,2451	0/0:25,0:25:75.19:0,75,2487	0/0:19,0:19:57.12:0,57,2023	0/0:7,0:39:18.31:0,18,2142	0/1:14,0:24:99:122,0,1003	0/0:21,0:21:63.12:0,63,2066	0/0:0,0:32:54:0,54,265	0/0:1,0:18:25.56:0,26,144	0/0:19,0:19:54.06:0,54,1635	0/0:14,0:14:39.03:0,39,1109	1/1:3,13:17:41.87:634,42,0	1/1:1,21:22:56.54:1077,57,0	1/1:0,19:19:6.02:168,6,0	0/1:8,0:19:99:107,0,382	0/1:9,0:13:99:103,0,317	0/1:7,0:25:34.36:34,0,608	0/0:24,0:24:72.14:0,72,2288	0/0:21,0:21:63.16:0,63,1950	1/1:1,41:42:84.29:2429,84,0	0/0:10,0:10:27.08:0,27,1017
chr10	52419728	.	C	CTTTG	6902.03	PASS	AB=0.828;AC=16;AF=0.286;AN=56;BaseQRankSum=1.689;DP=702;FS=0.866;HRun=0;HaplotypeScore=178.6682;InbreedingCoeff=0.7975;MQ=70.69;MQ0=3;MQRankSum=-8.060;QD=27.72;ReadPosRankSum=-1.441;VQSLOD=4.2507;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:45,0:45:13.01:1018,0,13	0/0:14,0:14:20.71:0,21,167	0/0:31,0:25:14.62:0,15,212	0/0:45,0:40:33.11:0,33,505	0/0:29,0:29:51.15:0,51,753	0/0:24,0:24:45.14:0,45,690	0/0:24,0:24:33.30:0,33,633	1/1:45,0:42:25.10:340,25,0	0/0:23,0:23:51.14:0,51,760	0/0:25,0:25:48.16:0,48,743	0/0:19,0:19:42.14:0,42,666	1/1:42,0:42:84.12:1918,84,0	1/1:24,0:24:39.13:879,39,0	0/0:22,0:22:42.13:0,42,640	0/0:32,0:32:38.63:0,39,475	0/0:17,0:17:24.02:0,24,219	0/1:10,11:21:56.67:720,0,57	1/1:5,9:14:27.09:647,27,0	0/0:14,0:14:14.99:0,15,140	0/0:21,0:21:29.71:0,30,193	0/0:19,0:19:5.09:0,5,18	1/1:14,0:14:11.96:231,12,0	1/1:17,0:17:27.09:469,27,0	1/1:27,0:27:30.10:679,30,0	0/0:23,0:23:48.14:0,48,713	0/0:21,0:21:33.11:0,33,527	0/0:41,0:41:83.04:0,83,720	0/0:9,0:9:21.07:0,21,335
chr10	52420289	.	C	CTG	15106.73	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=10.075;DP=533;FS=5.569;HRun=0;HaplotypeScore=89.6527;InbreedingCoeff=0.9983;MQ=83.97;MQ0=0;MQRankSum=-2.692;QD=51.74;ReadPosRankSum=0.397;VQSLOD=5.3404;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,20:21:63.22:1210,63,0	1/1:2,8:10:24.08:463,24,0	0/0:15,0:14:33.25:0,33,478	0/0:20,0:20:53.59:0,54,746	0/0:22,0:22:66.22:0,66,1011	0/0:20,0:20:57.19:0,57,869	0/0:12,0:12:36.12:0,36,550	1/1:4,27:31:87.30:1668,87,0	0/0:13,0:13:39.13:0,39,597	0/0:17,0:17:51.17:0,51,779	0/0:21,0:21:63.21:0,63,965	1/1:3,19:22:60.21:1154,60,0	1/1:2,12:15:36.12:686,36,0	0/0:16,0:16:45.15:0,45,689	1/1:1,22:23:66.23:1275,66,0	1/1:0,16:16:42.14:811,42,0	0/0:19,0:19:54.18:0,54,827	0/0:7,0:7:18.06:0,18,275	1/1:4,18:22:63.21:1183,63,0	1/1:2,27:30:78.27:1504,78,0	1/1:2,23:25:57.19:1101,57,0	1/1:3,11:14:33.11:637,33,0	1/1:0,13:13:33.11:637,33,0	1/1:0,16:16:45.15:869,45,0	0/0:25,0:25:75.25:0,75,1147	0/0:24,0:24:69.23:0,69,1057	1/1:2,32:33:99:1908,99,0	0/0:10,0:10:27.09:0,27,413
chr10	52423235	.	ACTCTCTCTCT	A	1096.71	PASS	AB=0.778;AC=11;AF=0.196;AN=56;BaseQRankSum=1.691;DP=539;FS=3.219;HRun=0;HaplotypeScore=150.1683;InbreedingCoeff=0.7080;MQ=76.78;MQ0=14;MQRankSum=-3.217;QD=8.70;ReadPosRankSum=-1.333;VQSLOD=2.4702;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:8.84:0,9,71	0/0:3,0:5:5.59:0,6,34	1/1:49,0:28:1.82:5,2,0	0/0:64,0:26:6.02:0,6,71	0/0:12,0:14:21.07:0,21,598	0/0:25,0:26:42.14:0,42,1663	0/0:24,0:24:33.10:0,33,1200	0/0:33,0:33:7.72:0,8,204	0/0:18,0:19:39.11:0,39,1280	0/0:12,0:13:21.07:0,21,429	0/0:17,0:17:33.11:0,33,1002	0/0:12,0:13:15.05:0,15,646	0/0:11,0:19:18.06:0,18,440	0/0:11,0:11:30.10:0,30,1219	0/1:10,0:14:6.34:6,0,172	0/0:7,0:17:19.35:0,19,144	0/0:13,0:13:24.08:0,24,852	0/0:11,0:11:17.65:0,18,629	1/1:10,0:9:8.06:96,8,0	1/1:5,6:11:9.03:249,9,0	1/1:17,0:17:12.04:264,12,0	0/0:10,0:15:6.02:0,6,76	0/0:15,0:16:30.09:0,30,853	0/0:10,0:15:9.03:0,9,293	0/0:16,0:16:15.05:0,15,598	0/0:19,0:18:30.10:0,30,1125	1/1:10,14:24:20.94:627,21,0	0/0:16,0:15:30.09:0,30,772
chr10	52423277	.	TTCTC	T	961.82	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.661;DP=591;FS=5.565;HRun=0;HaplotypeScore=113.8061;InbreedingCoeff=0.9327;MQ=70.14;MQ0=25;MQRankSum=-3.575;QD=36.99;ReadPosRankSum=-2.645;VQSLOD=3.1432;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:16:24.54:0,25,528	0/0:6,0:6:14.97:0,15,318	0/0:54,0:23:49.42:0,49,1018	0/0:53,0:17:38:0,38,590	0/0:21,0:21:48.14:0,48,1158	0/0:27,0:27:65.99:0,66,1461	0/0:20,0:20:48.15:0,48,1125	1/1:4,22:24:63.17:1057,63,0	0/0:23,0:23:63.20:0,63,1476	0/0:18,0:17:51.18:0,51,1252	0/0:28,0:28:78.26:0,78,1831	0/0:10,0:10:21.07:0,21,493	0/0:20,0:20:42.13:0,42,921	0/0:12,0:12:36.12:0,36,856	0/0:16,0:16:41.90:0,42,843	0/0:22,0:22:44.92:0,45,889	0/0:27,0:27:59.90:0,60,1274	0/0:14,0:12:29.85:0,30,502	0/0:13,0:13:30.99:0,31,735	0/0:22,0:22:49.48:0,49,934	0/0:14,0:14:28.65:0,29,784	0/0:16,0:15:39.13:0,39,892	0/0:17,0:17:33.11:0,33,768	0/0:8,0:9:12.04:0,12,259	0/0:13,0:12:27.09:0,27,631	0/0:29,0:28:75.21:0,75,1738	0/0:32,0:31:66.90:0,67,1217	0/0:11,0:9:14.94:0,15,313
chr10	52423646	.	AAAAC	A	7366.86	PASS	AB=0.531;AC=27;AF=0.482;AN=56;BaseQRankSum=13.705;DP=585;FS=0.794;HRun=0;HaplotypeScore=98.2742;InbreedingCoeff=0.8917;MQ=71.30;MQ0=4;MQRankSum=0.939;QD=28.44;ReadPosRankSum=0.746;VQSLOD=4.4595;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,11:22:1.82:423,2,0	1/1:1,6:7:15.05:243,15,0	0/0:25,0:21:15.05:0,15,299	0/0:20,0:17:18.06:0,18,377	0/0:33,0:33:77.79:0,78,1830	0/0:21,0:19:39.13:0,39,892	0/0:18,0:18:30.10:0,30,726	1/1:18,17:35:50.12:727,50,0	0/0:19,0:19:36.11:0,36,816	0/0:28,0:28:57.20:0,57,1361	0/0:34,0:34:75.25:0,75,1735	1/1:7,11:18:21.07:341,21,0	1/1:6,8:14:21.07:341,21,0	0/0:18,0:18:45.15:0,45,1025	1/1:4,21:25:57.19:925,57,0	1/1:7,13:20:39.13:633,39,0	0/0:32,0:32:70.30:0,70,1305	0/0:24,0:24:51.10:0,51,1083	1/1:6,9:15:24.05:341,24,0	1/1:1,22:23:57.15:896,57,0	1/1:3,16:19:39.13:633,39,0	1/1:2,6:8:15.05:243,15,0	1/1:4,9:13:27.09:438,27,0	0/1:2,15:17:15.33:454,0,15	0/0:20,0:20:42.14:0,42,1018	0/0:24,0:24:48.15:0,48,1094	1/1:4,19:23:45.15:730,45,0	0/0:10,0:10:18.06:0,18,436
chr10	52424850	.	TC	T	1298.71	PASS	AC=26;AF=0.481;AN=54;BaseQRankSum=4.640;DP=279;FS=0.000;HRun=9;HaplotypeScore=38.8146;InbreedingCoeff=0.8036;MQ=88.32;MQ0=8;MQRankSum=-0.789;QD=9.91;ReadPosRankSum=1.764;VQSLOD=1.1722;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:12.03:0,12,133	1/1:2,0:2:2.96:19,3,0	0/0:24,0:17:21.01:0,21,206	0/0:16,0:10:5.94:0,6,41	0/0:9,0:9:12.03:0,12,137	0/0:11,0:11:15.04:0,15,173	0/0:17,0:17:27.08:0,27,306	1/1:7,14:21:38.98:351,39,0	0/0:7,0:7:15.04:0,15,173	0/0:8,0:8:18.05:0,18,205	0/0:5,0:4:8.98:0,9,89	1/1:4,4:8:5.99:54,6,0	1/1:13,1:14:5.86:102,6,0	0/0:12,0:12:23.53:0,24,225	1/1:7,0:7:13.31:89,13,0	1/1:10,0:9:8.92:71,9,0	./.	0/0:1,0:1:2.84:0,3,14	1/1:2,7:9:17.99:159,18,0	1/1:5,2:7:5.99:55,6,0	1/1:8,6:14:11.99:110,12,0	1/1:7,0:7:11.64:82,12,0	1/1:10,1:11:9.36:69,9,0	1/1:10,1:10:17.94:159,18,0	0/0:10,0:10:15.04:0,15,165	0/0:6,0:6:12.04:0,12,138	1/1:4,6:9:20.96:182,21,0	0/0:3,0:3:3.01:0,3,34
chr10	52424858	.	C	CT	1328.42	PASS	AB=0.956;AC=23;AF=0.411;AN=56;BaseQRankSum=2.375;DP=218;FS=1.352;HRun=0;HaplotypeScore=40.9428;InbreedingCoeff=0.5426;MQ=70.94;MQ0=8;MQRankSum=-0.959;QD=12.53;ReadPosRankSum=2.541;VQSLOD=4.1456;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:14.78:0,15,161	1/1:0,2:2:3.01:43,3,0	0/0:19,0:11:20.72:0,21,210	0/0:10,0:4:8.76:0,9,57	0/0:7,0:7:12.04:0,12,151	0/0:6,0:6:15.52:0,16,209	0/0:13,0:13:11.17:0,11,357	0/1:18,1:19:18.06:200,0,18	0/0:5,0:5:15.05:0,15,208	0/0:7,0:7:18.06:0,18,227	0/0:6,0:5:11.99:0,12,129	1/1:5,0:5:7.20:49,7,0	1/1:4,6:10:24.01:287,24,0	0/0:10,0:10:26.97:0,27,269	1/1:5,3:8:3.93:150,4,0	1/1:4,5:8:3.64:116,4,0	0/0:4,0:3:2.80:0,3,13	0/0:1,0:1:2.88:0,3,15	1/1:7,0:7:2.83:76,3,0	0/1:5,0:5:16.43:19,0,16	1/1:6,0:6:5.09:76,5,0	1/1:5,2:7:6.81:128,7,0	1/1:1,6:7:11.97:133,12,0	1/1:2,8:9:17.99:192,18,0	0/0:7,0:7:18.04:0,18,220	0/0:6,0:6:18.04:0,18,220	0/1:10,1:10:8.04:45,0,8	0/0:1,0:1:3.01:0,3,34
chr10	52424867	.	CTCCT	C	2204.30	PASS	AC=28;AF=0.519;AN=54;BaseQRankSum=5.264;DP=225;FS=0.000;HRun=0;HaplotypeScore=47.9044;InbreedingCoeff=0.8499;MQ=60.78;MQ0=11;MQRankSum=-0.263;QD=18.68;ReadPosRankSum=1.080;VQSLOD=3.0335;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,7:9:6.02:114,6,0	1/1:3,0:3:9.01:116,9,0	0/0:16,0:7:10.79:0,11,98	0/0:15,0:8:13.58:0,14,234	0/0:8,0:8:18.04:0,18,241	0/0:11,0:11:21.46:0,21,286	0/0:13,0:13:36.09:0,36,709	1/1:15,0:13:26.97:255,27,0	0/0:7,0:7:21.05:0,21,367	0/0:4,0:4:11.98:0,12,158	0/0:6,0:6:18.05:0,18,408	1/1:8,0:8:11.01:130,11,0	1/1:10,0:10:15.48:161,15,0	0/0:5,0:5:10.43:0,10,231	1/1:7,0:7:21:198,21,0	1/1:9,0:7:20.93:194,21,0	0/0:4,0:3:3.01:0,3,57	0/0:1,0:1:3:0,3,27	1/1:6,1:7:18.03:224,18,0	1/1:2,4:6:9.02:120,9,0	1/1:5,0:5:3.01:48,3,0	1/1:9,0:9:8.93:66,9,0	1/1:6,0:6:14.92:142,15,0	1/1:10,0:9:27.03:285,27,0	0/0:7,0:7:21.05:0,21,426	0/0:9,0:9:27.07:0,27,470	1/1:3,10:13:25.77:360,26,0	./.
chr10	52424869	.	CCT	C	2290.98	PASS	AB=0.909;AC=27;AF=0.500;AN=54;BaseQRankSum=5.592;DP=220;FS=0.613;HRun=0;HaplotypeScore=39.8022;InbreedingCoeff=0.7854;MQ=60.90;MQ0=11;MQRankSum=0.633;QD=20.10;ReadPosRankSum=0.348;VQSLOD=3.2575;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:9,1:9:13.82:43,0,14	1/1:3,0:3:9.03:131,9,0	0/0:15,0:7:6.91:0,7,108	0/0:15,0:8:11.97:0,12,217	0/0:8,0:8:18.06:0,18,305	0/0:11,0:11:24.05:0,24,422	0/0:13,0:13:36.12:0,36,679	1/1:12,1:11:20.15:135,20,0	0/0:7,0:7:21.07:0,21,399	0/0:4,0:4:11.99:0,12,199	0/0:7,0:6:18.06:0,18,353	1/1:4,3:7:11.51:148,12,0	1/1:7,3:10:22.62:255,23,0	0/0:5,0:5:10.48:0,10,206	1/1:4,3:7:21.07:294,21,0	1/1:9,0:7:21.07:291,21,0	0/0:3,0:2:3.01:0,3,37	0/0:0,1:1:2.37:0,2,8	1/1:7,0:7:16.43:158,16,0	1/1:6,0:6:8.05:74,8,0	1/1:5,0:5:3:28,3,0	1/1:1,7:8:8.97:122,9,0	1/1:5,1:6:15.05:206,15,0	1/1:9,1:9:27.09:402,27,0	0/0:7,0:7:21.07:0,21,398	0/0:9,0:9:27.09:0,27,507	1/1:13,0:13:22.82:208,23,0	./.
chr10	52425266	.	A	AC	11664.86	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-16.122;DP=678;FS=5.621;HRun=6;HaplotypeScore=66.3271;InbreedingCoeff=0.9845;MQ=86.31;MQ0=0;MQRankSum=-7.655;QD=30.54;ReadPosRankSum=3.227;VQSLOD=5.5651;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,28:31:72.23:905,72,0	1/1:1,6:7:18.06:226,18,0	0/0:34,0:34:80.91:0,81,758	0/0:23,0:22:45.07:0,45,443	0/0:27,0:27:63.13:0,63,642	0/0:37,0:37:99:0,105,1068	0/0:14,0:14:39.09:0,39,398	1/1:11,29:40:84.27:1056,84,0	0/0:22,0:22:57.13:0,57,581	0/0:30,0:30:87.19:0,87,882	0/0:15,0:15:42.09:0,42,428	1/1:4,14:18:36.12:452,36,0	1/1:1,25:26:66.21:830,66,0	0/0:28,0:28:75.16:0,75,764	1/1:4,26:30:81.26:1015,81,0	1/1:1,22:23:60.19:755,60,0	0/0:17,0:17:51.07:0,51,504	0/0:14,0:14:36.08:0,36,367	1/1:3,12:15:36.12:453,36,0	1/1:0,18:18:54.17:676,54,0	1/1:4,34:38:94.18:1172,94,0	1/1:2,26:28:75.24:944,75,0	1/1:4,29:33:72.10:904,72,0	1/1:5,15:20:42.13:528,42,0	0/0:17,0:17:48.09:0,48,481	0/0:16,0:16:42.09:0,42,428	1/1:4,50:55:99:1750,141,0	0/0:2,0:2:6.01:0,6,61
chr10	52426089	.	T	TA	2108.14	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=-4.555;DP=528;FS=4.448;HRun=8;HaplotypeScore=52.1572;InbreedingCoeff=0.9048;MQ=76.44;MQ0=0;MQRankSum=-1.862;QD=24.23;ReadPosRankSum=-1.317;VQSLOD=3.9090;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:57:0,57,515	0/0:9,0:9:18.01:0,18,165	0/0:9,0:9:18:0,18,165	0/1:12,0:12:2.20:2,0,143	0/0:30,0:30:75.04:0,75,686	0/0:24,0:24:66.03:0,66,604	0/0:18,0:18:51.01:0,51,462	0/0:23,0:23:56.99:0,57,511	0/0:17,0:17:39.02:0,39,357	0/0:25,0:25:60:0,60,540	0/0:27,0:27:75.04:0,75,686	0/0:22,0:22:60.02:0,60,549	0/0:23,0:23:54:0,54,490	0/0:20,0:20:51.03:0,51,467	0/0:23,0:23:63.02:0,63,572	0/0:15,0:15:37.01:0,37,377	0/0:13,0:13:33.01:0,33,302	0/0:13,0:13:33.01:0,33,302	1/1:1,13:14:36.11:414,36,0	1/1:0,32:32:96.24:1091,96,0	1/1:1,5:6:15.04:172,15,0	0/0:20,0:20:48.01:0,48,439	0/0:16,0:16:42.02:0,42,384	0/0:17,0:17:44.96:0,45,399	0/0:21,0:21:60.01:0,60,544	0/0:26,0:26:72.03:0,72,656	1/1:5,18:23:50.95:588,51,0	0/0:7,1:8:21:0,21,192
chr10	52427755	.	TCTCTCTCTCTCC	T	616.17	PASS	AB=1.000;AC=14;AF=0.250;AN=56;BaseQRankSum=0.226;DP=584;FS=2.878;HRun=0;HaplotypeScore=163.8992;InbreedingCoeff=0.5051;MQ=59.15;MQ0=36;MQRankSum=-0.865;QD=2.91;ReadPosRankSum=-2.009;VQSLOD=2.5004;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:36,0:34:99:193,0,195	0/0:6,0:4:7.49:0,7,276	0/1:44,0:14:5.63:6,0,7	0/0:66,0:19:1.71:0,2,52	0/0:25,0:23:18.06:0,18,582	0/0:14,0:12:29.97:0,30,549	0/0:24,0:23:26.40:0,26,214	1/1:29,0:28:33.64:247,34,0	0/0:10,0:10:11.06:0,11,618	0/0:14,0:14:15.28:0,15,588	0/0:12,0:12:5.83:0,6,96	0/0:21,0:19:20.98:0,21,748	0/0:17,0:16:26.30:0,26,303	0/0:15,0:15:34.28:0,34,872	0/0:17,0:16:24.87:0,25,351	0/0:12,0:12:11.10:0,11,250	0/1:19,0:16:7.36:7,0,42	0/1:10,0:10:0.26:0,0,337	1/1:15,0:12:18.38:147,18,0	1/1:17,0:17:5.81:39,6,0	1/1:12,0:10:3.67:27,4,0	0/0:19,0:18:24.17:0,24,460	0/0:16,0:16:31.02:0,31,519	0/0:27,0:25:25.30:0,25,617	0/0:19,0:19:35.94:0,36,554	0/0:30,0:30:41.92:0,42,1455	1/1:7,23:29:1.91:107,2,0	0/0:8,0:6:7.34:0,7,187
chr10	52427767	.	CCTCT	C	87.75	PASS	AB=1.000;AC=9;AF=0.180;AN=50;BaseQRankSum=1.122;DP=504;FS=0.000;HRun=0;HaplotypeScore=97.2723;InbreedingCoeff=0.2151;MQ=55.08;MQ0=42;MQRankSum=0.737;QD=0.71;ReadPosRankSum=0.759;VQSLOD=1.7383;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:29:4.41:0,4,69	0/0:6,0:4:8.51:0,9,77	./.	./.	0/0:23,0:20:20.65:0,21,230	0/1:15,0:13:3.46:26,0,3	0/0:14,9:22:0.25:0,0,1	0/0:20,0:19:2.14:0,2,5	0/0:12,0:11:17.99:0,18,294	0/0:13,0:13:14.83:0,15,212	0/1:13,0:13:2.99:12,0,3	0/0:19,0:17:11.81:0,12,132	0/1:16,0:15:5.25:5,0,18	0/0:19,0:17:18.04:0,18,318	0/0:14,0:13:4.83:0,5,42	0/0:9,0:9:11.84:0,12,131	0/0:20,0:18:9.56:0,10,64	0/0:12,0:10:13.20:0,13,140	0/0:11,0:9:3.07:0,3,7	0/0:19,0:18:0.47:0,0,1	1/1:12,0:10:0.24:0,0,0	0/0:20,0:18:11.79:0,12,100	0/0:15,0:15:6.71:0,7,74	0/1:26,0:24:22.17:102,0,22	0/1:17,0:17:28.88:29,0,253	0/0:26,0:24:36.93:0,37,506	1/1:25,0:23:2.27:26,2,0	./.
chr10	52428053	.	C	CT	3984.29	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-10.623;DP=499;FS=1.773;HRun=8;HaplotypeScore=49.2966;InbreedingCoeff=0.9233;MQ=68.73;MQ0=0;MQRankSum=0.164;QD=27.86;ReadPosRankSum=-1.906;VQSLOD=3.4635;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,19:23:55.72:627,56,0	0/0:5,0:5:6:0,6,55	0/0:11,0:11:0.64:0,1,133	0/0:6,0:6:12.48:0,12,110	0/0:20,0:20:51.02:0,51,467	0/0:24,0:24:66.03:0,66,604	0/0:12,0:12:33:0,33,297	1/1:9,26:36:84.04:934,84,0	0/0:18,0:18:39.01:0,39,357	0/0:25,0:25:72.03:0,72,656	0/0:23,0:23:63.03:0,63,577	0/0:12,0:12:33.02:0,33,302	0/0:15,0:15:39.01:0,39,357	0/0:15,0:15:42.02:0,42,383	0/0:19,0:19:51.01:0,51,462	0/0:9,0:9:27.01:0,27,247	0/0:15,0:15:42.02:0,42,384	0/0:23,0:23:51.02:0,51,467	1/1:5,23:28:72.11:812,72,0	1/1:3,22:25:63.15:712,63,0	1/1:0,5:5:15.04:173,15,0	0/0:12,0:12:30:0,30,270	0/0:20,0:20:51.02:0,51,467	0/0:15,0:15:42:0,42,378	0/0:23,0:23:60.01:0,60,548	0/0:23,0:23:57.02:0,57,522	1/1:4,22:26:63.19:725,63,0	0/0:11,0:11:32.97:0,33,293
chr10	52428488	.	C	CT	2064.96	PASS	AB=0.944;AC=52;AF=0.929;AN=56;BaseQRankSum=2.568;DP=416;FS=2.488;HRun=2;HaplotypeScore=237.1657;InbreedingCoeff=0.4000;MQ=45.56;MQ0=0;MQRankSum=-6.179;QD=5.07;ReadPosRankSum=0.716;VQSLOD=0.4407;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:7,0:7:1.73:10,0,2	1/1:6,0:6:8.46:41,8,0	0/1:7,1:7:48.49:48,0,88	0/0:9,0:9:14.22:0,14,152	1/1:33,1:33:28.01:97,28,0	1/1:20,0:20:26.13:68,26,0	1/1:7,0:7:10.30:36,10,0	1/1:28,1:29:52.89:200,53,0	1/1:14,2:16:27.71:151,28,0	1/1:21,1:22:46.99:198,47,0	1/1:25,0:25:22.72:70,23,0	1/1:10,0:10:15.58:51,16,0	1/1:11,0:11:12.65:49,13,0	1/1:11,0:11:15.11:58,15,0	1/1:11,0:11:16.23:59,16,0	1/1:15,1:16:22.71:105,23,0	1/1:7,1:8:9.71:53,10,0	1/1:10,1:11:21.20:83,21,0	1/1:14,0:14:31.21:99,31,0	1/1:24,0:24:35.17:136,35,0	1/1:8,0:8:9.30:52,9,0	1/1:12,0:12:14.64:38,15,0	1/1:19,2:21:21.91:102,22,0	1/1:7,0:7:5.10:12,5,0	1/1:18,1:19:28.01:100,28,0	1/1:21,1:22:37.76:144,38,0	1/1:24,0:24:30.04:99,30,0	1/1:4,0:4:6.96:19,7,0
chr10	52429557	.	CTGTT	C	2140.49	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.820;DP=709;FS=11.708;HRun=0;HaplotypeScore=109.5927;InbreedingCoeff=0.9915;MQ=87.59;MQ0=0;MQRankSum=-3.374;QD=38.22;ReadPosRankSum=0.588;VQSLOD=2.9968;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:54.14:0,54,1410	0/0:10,0:10:30.10:0,30,810	0/0:27,0:27:81.21:0,81,1936	0/0:31,0:31:89.64:0,90,1947	0/0:34,0:34:99:0,102,2713	1/1:0,31:31:75.26:1453,75,0	1/1:2,23:25:42.14:809,42,0	0/0:29,0:29:84.02:0,84,2085	0/0:20,0:20:54.19:0,54,1446	0/0:33,0:33:96.30:0,96,2501	0/0:28,0:28:81.28:0,81,2169	0/0:28,0:28:84.27:0,84,2145	0/0:25,0:25:75.25:0,75,1921	0/0:22,0:22:63.22:0,63,1715	0/0:28,0:28:78.25:0,78,2079	0/0:27,0:27:78.27:0,78,2106	0/0:24,0:24:69.18:0,69,1691	0/0:12,0:12:33.11:0,33,884	0/0:20,0:20:57.20:0,57,1503	0/0:21,0:21:60.18:0,60,1491	0/0:40,0:40:99:0,120,3257	0/0:19,0:19:57.15:0,57,1470	0/0:23,0:23:66.23:0,66,1730	0/0:22,0:22:66.23:0,66,1775	0/0:32,0:32:93.32:0,93,2511	0/0:30,0:30:84.27:0,84,2145	0/0:44,0:44:99:0,126,3368	0/0:5,0:5:15.05:0,15,411
chr10	52431319	.	TAAAAAGAA	T	885.78	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.208;DP=468;FS=3.485;HRun=0;HaplotypeScore=98.3444;InbreedingCoeff=0.8710;MQ=60.25;MQ0=12;MQRankSum=-4.638;QD=21.09;ReadPosRankSum=-0.393;VQSLOD=2.8073;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:33:75.26:0,75,3143	0/0:8,0:8:21.07:0,21,895	0/0:26,0:11:11.01:0,11,532	0/0:17,0:3:0.47:0,0,1	0/0:20,0:19:51.18:0,51,1953	0/0:15,0:14:36.12:0,36,1415	0/0:9,0:8:21.07:0,21,782	0/0:25,0:23:60.21:0,60,2272	0/0:11,0:11:27.09:0,27,1044	0/0:18,0:18:42.14:0,42,1643	0/0:25,0:25:66.21:0,66,2585	0/0:11,0:11:30.09:0,30,1166	0/0:18,0:18:51.18:0,51,1982	0/0:6,0:6:18.04:0,18,537	0/0:12,0:12:30.09:0,30,1085	0/0:9,0:9:24.07:0,24,892	1/1:4,21:24:30.10:745,30,0	1/1:5,12:14:12.01:257,12,0	0/0:24,0:22:54.18:0,54,2072	0/0:26,0:26:60.19:0,60,2281	0/0:9,0:9:21.07:0,21,809	0/0:5,0:4:12.04:0,12,512	0/0:11,0:11:21.06:0,21,781	0/0:10,0:10:27.09:0,27,1040	0/0:25,0:25:75.25:0,75,2931	0/0:20,0:20:57.20:0,57,2281	0/0:16,0:16:36.11:0,36,1422	0/0:15,0:15:45.15:0,45,1826
chr10	52431468	.	AAAGGCAAGAAAATC	A	1538.62	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.197;DP=514;FS=7.275;HRun=0;HaplotypeScore=195.1189;InbreedingCoeff=0.9636;MQ=79.32;MQ0=0;MQRankSum=-3.993;QD=54.95;ReadPosRankSum=-2.728;VQSLOD=1.7891;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:87.28:0,87,5591	0/0:6,0:6:12.04:0,12,694	0/0:24,0:24:61.91:0,62,3012	0/0:17,0:16:47.90:0,48,2340	0/0:18,0:18:51.18:0,51,3431	0/0:19,0:19:51.18:0,51,3460	0/0:19,0:19:57.20:0,57,3711	1/1:13,15:28:48.15:1633,48,0	0/0:17,0:17:45.15:0,45,3045	0/0:18,0:18:48.16:0,48,3039	0/0:17,0:17:51.15:0,51,2847	0/0:12,0:12:33.11:0,33,2251	0/0:17,0:17:45.15:0,45,2928	0/0:11,0:11:33.11:0,33,2213	0/0:11,0:11:30.10:0,30,1770	0/0:19,0:19:54.19:0,54,3353	0/0:25,0:25:69.24:0,69,4354	0/0:21,0:21:54.19:0,54,3543	0/0:28,0:28:75.24:0,75,4852	0/0:18,0:18:48.16:0,48,2930	0/0:27,0:27:75.26:0,75,5174	0/0:9,0:9:27.09:0,27,1797	0/0:9,0:9:27.09:0,27,1732	0/0:27,0:27:69.19:0,69,4488	0/0:15,0:15:42.14:0,42,2805	0/0:21,0:21:63.22:0,63,4243	0/0:21,0:21:57.20:0,57,3681	0/0:8,0:8:21.07:0,21,1464
chr10	52431515	.	A	AACACAC	2413.39	PASS	AB=0.971;AC=18;AF=0.360;AN=50;BaseQRankSum=-1.566;DP=501;FS=0.000;HRun=0;HaplotypeScore=130.5302;InbreedingCoeff=0.4832;MQ=57.20;MQ0=18;MQRankSum=-4.475;QD=11.95;ReadPosRankSum=-1.225;VQSLOD=2.7120;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:23:20.49:0,20,199	0/0:7,0:7:3.01:0,3,40	./.	./.	0/0:19,0:18:6.02:0,6,119	0/0:20,0:22:20.74:0,21,337	0/1:16,0:17:0.78:1,0,179	./.	0/0:19,0:19:21.49:0,21,348	0/0:11,0:10:6.01:0,6,68	0/0:16,0:16:24.05:0,24,444	1/1:10,0:13:8.65:230,9,0	1/1:13,5:20:15.37:448,15,0	0/0:17,0:20:4.97:0,5,483	1/1:20,0:19:21.25:471,21,0	1/1:11,8:24:17.20:519,17,0	0/0:16,0:16:1.11:0,1,314	0/1:25,0:25:26.51:27,0,645	0/1:17,0:15:31.04:59,0,31	0/1:15,0:16:28.92:29,0,135	0/0:23,0:23:5.80:0,6,33	1/1:12,0:12:12.04:268,12,0	1/1:10,0:9:6.02:129,6,0	1/1:16,7:25:12.36:404,12,0	0/0:11,0:11:12.04:0,12,223	0/0:22,0:22:18.05:0,18,288	0/0:17,0:17:17.13:0,17,160	0/0:10,0:9:3.01:0,3,61
chr10	52431556	.	A	ACC	1186.59	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=4.781;DP=474;FS=0.475;HRun=2;HaplotypeScore=88.9685;InbreedingCoeff=0.7620;MQ=68.14;MQ0=8;MQRankSum=-2.748;QD=8.92;ReadPosRankSum=-2.384;VQSLOD=-0.3844;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:21:43.62:253,44,0	0/0:7,0:7:17.87:0,18,132	0/0:15,0:10:16.19:0,16,180	0/0:18,0:16:17.59:0,18,279	0/0:11,0:10:12.01:0,12,137	0/0:15,0:15:38.97:0,39,401	0/0:19,0:19:27.29:0,27,438	1/1:22,0:19:25.67:380,26,0	0/0:19,0:19:50.01:0,50,507	0/0:15,0:14:39:0,39,364	0/0:20,0:19:42.05:0,42,495	0/0:16,0:15:10.03:0,10,131	0/0:20,0:20:16.61:0,17,211	0/0:22,0:22:58.61:0,59,585	0/0:25,0:24:20.05:0,20,209	0/1:20,0:20:28.54:29,0,203	0/0:16,0:16:33.38:0,33,409	0/0:22,0:22:51.50:0,51,668	1/1:3,6:10:23.49:193,23,0	1/1:3,13:17:7.13:224,7,0	1/1:1,22:23:3.01:56,3,0	0/0:12,0:12:10.56:0,11,125	0/0:10,0:10:4.79:0,5,97	0/0:19,0:19:4.01:0,4,149	0/0:15,0:15:38.95:0,39,376	0/0:18,0:17:44.84:0,45,463	1/1:5,14:20:14.67:229,15,0	0/0:7,0:6:14.97:0,15,137
chr10	52433385	.	TACAC	T	1007.90	PASS	AB=0.852;AC=16;AF=0.333;AN=48;BaseQRankSum=4.336;DP=563;FS=9.589;HRun=0;HaplotypeScore=102.1156;InbreedingCoeff=0.2487;MQ=67.09;MQ0=8;MQRankSum=-1.009;QD=4.00;ReadPosRankSum=0.363;VQSLOD=0.7901;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:39,0:38:17.45:17,0,101	0/0:10,0:11:11.78:0,12,223	./.	./.	0/0:22,0:22:14.64:0,15,243	0/0:24,0:24:24.05:0,24,384	0/0:18,0:17:23.80:0,24,370	./.	0/1:10,0:12:28.89:29,0,162	0/0:22,0:22:21.06:0,21,380	0/0:14,0:15:8.77:0,9,153	1/1:9,0:14:15.02:149,15,0	1/1:19,0:20:11.60:98,12,0	0/0:23,0:22:15.05:0,15,345	0/0:33,0:33:21.07:0,21,435	0/0:17,0:21:9.02:0,9,164	0/1:20,3:25:90.42:112,0,90	0/1:18,1:20:95.31:95,0,116	0/1:12,2:12:11.33:83,0,11	0/1:15,1:19:6.29:65,0,6	0/0:18,0:16:3.01:0,3,42	1/1:11,1:20:12.01:134,12,0	./.	1/1:22,8:30:17.98:277,18,0	0/1:12,4:17:28.40:28,0,218	0/0:18,0:18:23.59:0,24,237	0/1:12,2:17:2.93:84,0,3	0/0:11,0:10:20.84:0,21,382
chr10	52433583	.	G	GAA	5223.09	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-15.101;DP=598;FS=0.000;HRun=6;HaplotypeScore=67.4510;InbreedingCoeff=0.9999;MQ=83.68;MQ0=0;MQRankSum=-0.611;QD=45.42;ReadPosRankSum=-1.375;VQSLOD=3.5630;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,16:17:45.15:761,45,0	0/0:12,0:12:36.11:0,36,439	0/0:27,0:27:75:0,75,872	0/0:14,0:14:36.02:0,36,385	0/0:20,0:20:54.16:0,54,658	0/0:31,0:31:90.27:0,90,1085	0/0:15,0:15:42.13:0,42,512	1/1:2,16:20:54.14:834,54,0	0/0:25,0:25:69.19:0,69,827	0/0:25,0:25:72.22:0,72,870	0/0:28,0:28:72.22:0,72,878	0/0:23,0:23:63.20:0,63,769	0/0:26,0:26:72.22:0,72,878	0/0:18,0:18:48.14:0,48,585	0/0:28,0:28:75.22:0,75,903	0/0:19,0:19:53.64:0,54,619	0/0:15,0:15:39.10:0,39,461	0/0:23,0:23:69.12:0,69,795	1/1:1,16:17:48.16:788,48,0	1/1:0,21:21:60.21:1014,60,0	1/1:0,17:18:51.17:863,51,0	0/0:26,0:26:66.20:0,66,805	0/0:19,0:19:51.16:0,51,622	0/0:28,0:28:81.24:0,81,975	0/0:23,0:23:69.22:0,69,842	0/0:26,0:26:69.21:0,69,842	1/1:1,21:21:57.20:964,57,0	0/0:12,0:12:36.11:0,36,439
chr10	52434084	.	G	GA	7409.63	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-14.533;DP=604;FS=9.800;HRun=9;HaplotypeScore=55.9950;InbreedingCoeff=0.9880;MQ=71.28;MQ0=0;MQRankSum=-1.842;QD=26.65;ReadPosRankSum=2.298;VQSLOD=4.9911;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,30:36:90.20:982,90,0	1/1:0,6:6:15.04:166,15,0	0/0:13,0:13:8.44:0,8,103	0/0:14,0:15:26.62:0,27,210	0/0:31,0:31:86.96:0,87,751	0/0:22,0:22:62.97:0,63,543	0/0:13,0:13:29.99:0,30,260	0/0:36,0:36:80.96:0,81,701	0/0:15,0:15:35.98:0,36,312	0/0:24,0:24:71.98:0,72,624	0/0:27,0:27:77.94:0,78,668	1/1:3,10:13:24.06:266,24,0	1/1:2,21:23:60.16:664,60,0	0/0:24,0:24:65.97:0,66,569	1/1:3,19:22:51.14:564,51,0	1/1:0,20:20:54.15:597,54,0	0/0:23,0:23:59.96:0,60,516	0/0:17,0:17:41.97:0,42,365	1/1:8,21:29:60.16:664,60,0	1/1:3,27:30:81.22:896,81,0	1/1:0,12:12:27.07:299,27,0	1/1:4,15:19:45.08:484,45,0	1/1:2,23:25:69.19:763,69,0	1/1:4,11:15:39:403,39,0	0/0:25,0:25:68.95:0,69,594	0/0:29,0:29:68.94:0,69,599	1/1:2,26:28:60.16:662,60,0	0/0:12,0:12:26.94:0,27,229
chr10	52435813	.	T	TAAA	4089.36	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=12.159;DP=635;FS=8.219;HRun=11;HaplotypeScore=111.4037;InbreedingCoeff=0.9962;MQ=75.21;MQ0=0;MQRankSum=-3.742;QD=26.90;ReadPosRankSum=-5.303;VQSLOD=0.9422;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:8,2:35:67.65:565,68,0	0/0:8,0:8:21.06:0,21,246	0/0:19,0:19:32.61:0,33,296	0/0:12,0:13:26.54:0,27,246	0/0:32,0:34:76.56:0,77,848	0/0:23,0:25:63.05:0,63,704	0/0:30,0:30:84.22:0,84,981	1/1:10,0:32:63.25:502,63,0	0/0:23,0:23:60.10:0,60,680	0/0:22,0:22:48.05:0,48,561	0/0:20,0:21:51.01:0,51,566	0/0:21,0:23:61.68:0,62,701	0/0:22,0:22:44.95:0,45,507	0/0:19,0:19:42.01:0,42,491	0/0:31,0:31:72.08:0,72,842	0/0:28,0:28:78.14:0,78,900	0/0:21,0:21:51.05:0,51,583	0/0:12,0:12:36.09:0,36,409	1/1:7,16:27:69.17:1138,69,0	1/1:10,15:26:60.15:986,60,0	1/1:6,7:14:15.94:284,16,0	0/0:20,0:21:52.66:0,53,628	0/0:24,0:24:60.09:0,60,701	0/0:16,0:18:41.89:0,42,456	0/0:28,0:28:72.15:0,72,830	0/0:23,0:23:54.05:0,54,608	1/1:3,12:18:36.10:615,36,0	0/0:15,0:15:39.12:0,39,456
chr10	52437485	.	A	AAC	566.47	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-3.637;DP=858;FS=6.266;HRun=0;HaplotypeScore=105.7715;InbreedingCoeff=0.8208;MQ=54.59;MQ0=27;MQRankSum=-3.726;QD=16.66;ReadPosRankSum=-3.277;VQSLOD=2.5136;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:44:83.79:0,84,840	0/0:10,0:9:9.47:0,9,223	0/0:39,0:12:21.05:0,21,248	0/0:49,0:24:45.08:0,45,513	0/0:22,0:22:39.12:0,39,483	0/0:25,0:25:60.16:0,60,718	0/0:30,0:30:68.72:0,69,819	1/1:16,18:27:10.99:651,11,0	0/0:26,0:25:51.07:0,51,632	0/0:37,0:35:63.62:0,64,744	0/0:19,0:19:33.10:0,33,409	0/0:26,0:26:44.42:0,44,556	0/0:36,0:37:37.93:0,38,906	0/0:30,0:29:72.11:0,72,867	0/0:36,0:36:75.19:0,75,911	0/0:23,0:23:51.16:0,51,631	0/0:49,0:47:84.26:0,84,1230	0/0:22,0:21:32.17:0,32,514	0/0:31,0:24:38.87:0,39,483	0/0:25,0:25:54.17:0,54,669	0/0:59,0:55:99:0,129,1599	0/0:19,0:20:35.87:0,36,389	0/0:27,0:27:72.09:0,72,829	0/0:36,0:36:72.06:0,72,868	0/0:20,0:20:45.04:0,45,508	0/0:38,0:38:84.25:0,84,1030	0/0:36,0:35:60.23:0,60,873	0/0:4,0:3:6.02:0,6,74
chr10	52437602	.	TA	T	234.93	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.167;DP=585;FS=3.303;HRun=9;HaplotypeScore=84.1529;InbreedingCoeff=0.8415;MQ=70.12;MQ0=4;MQRankSum=-2.573;QD=12.36;ReadPosRankSum=-2.129;VQSLOD=3.1057;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:2,12:14:0:0,0,0	0/0:10,0:10:24.85:0,25,232	0/0:29,1:18:9.32:0,9,179	0/0:41,0:26:35:0,35,331	0/0:36,0:36:91.50:0,91,1031	0/0:12,0:12:33.09:0,33,371	0/0:10,0:10:24.07:0,24,277	1/1:5,14:17:36:329,36,0	0/0:12,0:12:33.09:0,33,372	0/0:32,0:32:87.25:0,87,996	0/0:22,0:22:60.07:0,60,644	0/0:13,0:13:36.11:0,36,415	0/0:19,1:20:29.68:0,30,566	0/0:26,0:26:70.35:0,70,756	0/0:24,0:24:32.11:0,32,344	0/0:14,0:14:18.05:0,18,208	0/0:30,0:30:84.18:0,84,933	0/0:16,0:16:45.13:0,45,519	0/0:30,0:30:69.05:0,69,759	0/0:23,0:23:66.13:0,66,722	0/0:13,0:13:29.88:0,30,263	0/0:25,0:25:65.77:0,66,822	0/0:25,0:25:66.20:0,66,761	0/0:19,0:19:40.34:0,40,433	0/0:12,0:12:33.10:0,33,381	0/0:27,0:27:72.19:0,72,812	0/0:20,0:19:36.10:0,36,415	0/0:9,0:9:27.08:0,27,312
chr10	52437624	.	T	TAC	447.09	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.844;DP=684;FS=1.594;HRun=0;HaplotypeScore=127.9766;InbreedingCoeff=0.8009;MQ=56.95;MQ0=22;MQRankSum=-6.440;QD=10.40;ReadPosRankSum=-5.753;VQSLOD=1.9405;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,3:17:0.74:0,1,2	0/0:11,0:9:12.04:0,12,153	0/0:26,0:13:12.40:0,12,166	0/0:29,0:11:15.05:0,15,191	0/0:40,0:39:58.34:0,58,1011	0/0:17,0:16:36.08:0,36,430	0/0:13,0:13:20.94:0,21,235	1/1:39,3:30:16.68:536,17,0	0/0:14,0:14:33.10:0,33,419	0/0:44,0:40:96.30:0,96,1211	0/0:21,0:21:57.18:0,57,724	0/0:16,0:16:36.05:0,36,435	0/0:22,0:22:38.18:0,38,626	0/0:28,0:28:60.12:0,60,708	0/0:30,0:30:38.97:0,39,468	0/0:13,0:12:21.05:0,21,253	0/0:34,0:33:65.61:0,66,789	0/0:20,0:20:41.92:0,42,500	0/0:41,0:33:48.10:0,48,585	0/0:28,0:28:40.99:0,41,606	0/0:25,0:20:27.09:0,27,343	0/0:28,0:28:74.89:0,75,907	0/0:22,0:22:57.18:0,57,714	0/0:18,0:17:40.37:0,40,499	0/0:22,0:22:20.37:0,20,472	0/0:27,0:25:37.17:0,37,608	0/0:20,0:19:34.08:0,34,422	0/0:12,0:12:12.51:0,13,396
chr10	52437630	.	CACACAT	C	434.52	PASS	AB=0.852;AC=3;AF=0.054;AN=56;BaseQRankSum=4.188;DP=697;FS=0.843;HRun=0;HaplotypeScore=168.4847;InbreedingCoeff=0.4062;MQ=53.25;MQ0=25;MQRankSum=-3.640;QD=6.68;ReadPosRankSum=-3.833;VQSLOD=1.5760;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:13,5:16:1.60:55,2,0	0/0:11,0:9:12.04:0,12,331	0/0:22,0:9:15.03:0,15,291	0/0:28,0:10:15.05:0,15,375	0/0:38,0:37:77.03:0,77,2604	0/0:18,0:17:42.11:0,42,1156	0/0:16,0:16:33.56:0,34,783	0/1:38,7:33:99:470,0,397	0/0:14,0:14:38.16:0,38,1002	0/0:47,0:42:87.03:0,87,3198	0/0:20,0:20:57.20:0,57,1737	0/0:16,0:16:36.59:0,37,974	0/0:22,0:22:62.94:0,63,1476	0/0:28,0:28:66.22:0,66,1926	0/0:29,0:29:42.14:0,42,986	0/0:15,0:14:24.07:0,24,567	0/0:33,0:32:82.20:0,82,1908	0/0:21,0:21:42.04:0,42,1387	0/0:44,0:34:43.86:0,44,1420	0/0:26,0:26:52.28:0,52,1515	0/0:29,0:23:30.10:0,30,929	0/0:28,0:28:78.25:0,78,2207	0/0:21,0:21:60.20:0,60,1590	0/0:20,0:19:48.13:0,48,1207	0/0:24,0:24:55.26:0,55,1472	0/0:30,0:27:43.17:0,43,1548	0/0:19,0:18:32.52:0,33,1125	0/0:13,0:13:37.37:0,37,1078
chr10	52437644	.	TAC	T	2240.48	PASS	AB=0.894;AC=13;AF=0.232;AN=56;BaseQRankSum=2.842;DP=665;FS=0.447;HRun=0;HaplotypeScore=119.9562;InbreedingCoeff=0.4637;MQ=51.93;MQ0=26;MQRankSum=1.639;QD=11.73;ReadPosRankSum=1.595;VQSLOD=3.6205;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:15:3.24:0,3,71	1/1:2,9:9:12.04:145,12,0	0/0:10,0:5:2.96:0,3,29	0/0:15,0:4:2.97:0,3,20	0/0:37,0:35:81.19:0,81,1225	0/0:17,0:16:39.13:0,39,631	0/0:16,0:16:42:0,42,592	0/0:49,0:35:24.07:0,24,163	0/0:13,0:13:35.91:0,36,524	0/0:43,0:39:94.12:0,94,1494	0/0:21,0:21:47.99:0,48,693	0/1:15,0:15:4.66:243,0,5	0/1:19,1:20:85.19:205,0,85	0/0:29,0:29:66.02:0,66,1001	1/1:5,24:29:12.08:391,12,0	0/1:3,13:15:24.55:246,0,25	0/0:30,0:29:34.66:0,35,666	0/1:24,0:24:4.75:5,0,429	0/0:29,0:23:54.21:0,54,682	0/0:23,0:22:38.81:0,39,579	0/0:29,0:22:27.09:0,27,421	1/1:25,1:26:46.93:597,47,0	1/1:23,0:23:40.72:442,41,0	0/1:26,1:26:31.81:135,0,32	0/0:28,0:28:69.62:0,70,1002	0/0:27,0:23:50.64:0,51,786	0/0:22,0:21:38.15:0,38,537	0/0:18,0:17:38.46:0,38,674
chr10	52437660	.	T	TACACAC	1765.86	PASS	AB=1.000;AC=12;AF=0.231;AN=52;BaseQRankSum=-1.705;DP=695;FS=3.607;HRun=0;HaplotypeScore=195.4016;InbreedingCoeff=0.6424;MQ=52.39;MQ0=28;MQRankSum=-1.059;QD=8.53;ReadPosRankSum=-2.841;VQSLOD=2.4964;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:18:8.90:0,9,85	0/0:10,0:10:12.04:0,12,245	./.	./.	0/0:39,0:37:34.40:0,34,819	0/0:22,0:21:38.20:0,38,652	0/0:16,0:16:20.40:0,20,398	1/1:42,0:28:0.59:20,1,0	0/0:19,0:19:27.07:0,27,477	0/0:44,0:40:49.40:0,49,837	0/0:19,0:20:28.82:0,29,571	0/0:19,0:19:26.19:0,26,267	0/1:19,0:19:14.16:14,0,425	0/0:30,0:29:47.43:0,47,801	0/0:33,0:33:50.03:0,50,868	0/0:19,0:18:36.11:0,36,662	0/0:36,0:35:54.95:0,55,909	0/1:25,0:23:11.09:11,0,467	1/1:12,1:26:44.08:833,44,0	1/1:13,12:25:9.03:137,9,0	1/1:37,0:31:32.88:510,33,0	0/0:24,0:24:4.31:0,4,263	0/0:23,0:23:3.01:0,3,170	0/0:27,0:25:16.10:0,16,419	0/0:29,0:29:59.90:0,60,1101	0/0:27,0:23:30.66:0,31,535	1/1:12,14:28:15.44:403,15,0	0/0:18,0:15:20.21:0,20,429
chr10	52438692	.	TTTTA	T	7865.16	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=14.106;DP=468;FS=0.835;HRun=0;HaplotypeScore=79.6145;InbreedingCoeff=0.9568;MQ=60.22;MQ0=0;MQRankSum=-1.973;QD=31.59;ReadPosRankSum=0.509;VQSLOD=4.7980;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,24:25:57.19:940,57,0	1/1:0,6:6:18.06:286,18,0	0/0:4,0:4:9.03:0,9,177	0/0:4,0:3:3.01:0,3,74	0/0:28,0:28:63.21:0,63,1454	0/0:13,0:13:30.08:0,30,621	0/0:10,0:10:15.05:0,15,346	1/1:18,14:32:42.11:638,42,0	0/0:9,0:9:18.06:0,18,445	0/0:14,0:14:39.13:0,39,881	0/0:19,0:19:45.15:0,45,1101	1/1:1,18:19:39.13:652,39,0	1/1:2,16:18:48.16:758,48,0	0/0:12,0:12:30.10:0,30,712	1/1:3,15:18:36.12:600,36,0	1/1:4,9:13:24.08:388,24,0	0/0:23,0:23:57.20:0,57,1353	0/0:14,0:14:30.06:0,30,652	1/1:9,10:19:27.09:430,27,0	1/1:3,21:24:42.14:701,42,0	1/1:2,7:9:18.06:301,18,0	1/1:3,9:11:18.06:301,18,0	1/1:3,15:18:39.13:650,39,0	1/1:3,4:7:12.04:199,12,0	0/0:26,0:26:63.22:0,63,1557	0/0:25,0:25:60.21:0,60,1464	1/1:9,20:29:63.15:1021,63,0	0/0:18,0:18:33.11:0,33,809
chr10	52440404	.	GTA	G	3115.84	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=9.255;DP=593;FS=3.456;HRun=0;HaplotypeScore=72.5178;InbreedingCoeff=0.9888;MQ=66.31;MQ0=0;MQRankSum=0.965;QD=36.66;ReadPosRankSum=-0.313;VQSLOD=5.5781;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:63.19:0,63,1161	0/0:4,0:4:12.03:0,12,199	0/0:11,0:9:27.09:0,27,495	0/0:13,0:12:33.08:0,33,595	0/0:25,0:25:75.22:0,75,1391	0/0:21,0:21:57.20:0,57,1078	0/0:15,0:15:45.11:0,45,823	0/0:33,0:33:93.25:0,93,1687	0/0:16,0:16:42.14:0,42,810	0/0:27,0:27:78.26:0,78,1462	0/0:15,0:15:45.15:0,45,869	0/0:29,0:29:75.26:0,75,1422	0/0:23,0:23:66.23:0,66,1252	0/0:23,0:23:57.20:0,57,1086	0/0:25,0:25:69.24:0,69,1321	0/0:29,0:29:84.29:0,84,1613	0/0:27,0:27:72.21:0,72,1320	0/0:23,0:23:66.23:0,66,1243	1/1:0,21:21:63.16:900,63,0	1/1:0,17:17:45.15:679,45,0	1/1:0,30:30:72.24:1102,72,0	0/0:22,0:22:63.22:0,63,1198	0/0:24,0:24:69.24:0,69,1319	0/0:32,0:32:90.25:0,90,1639	0/0:22,0:22:63.22:0,63,1176	0/0:15,0:15:42.14:0,42,794	1/1:0,17:17:39.13:596,39,0	0/0:8,0:8:18.06:0,18,347
chr10	52440976	.	ACC	A	2175.14	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=8.861;DP=574;FS=30.518;HRun=2;HaplotypeScore=114.8879;InbreedingCoeff=0.9816;MQ=70.28;MQ0=7;MQRankSum=-4.754;QD=18.43;ReadPosRankSum=0.127;VQSLOD=-0.2434;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:31:63.61:0,64,508	1/1:9,0:9:17.94:147,18,0	0/0:39,0:24:72.04:0,72,846	0/0:53,0:31:60.45:0,60,782	0/0:16,0:16:40.60:0,41,607	0/0:17,0:17:36.17:0,36,671	0/0:37,0:37:78.92:0,79,1593	0/0:23,0:23:26.81:0,27,339	0/0:19,0:17:36.20:0,36,706	0/0:18,0:17:40.24:0,40,796	0/0:10,0:10:21.03:0,21,380	1/1:11,5:16:41.72:383,42,0	1/1:8,7:13:38.94:361,39,0	0/0:20,0:20:57.05:0,57,901	1/1:18,7:25:74.95:686,75,0	1/1:10,6:16:38.95:361,39,0	0/0:37,0:37:96.26:0,96,1747	0/0:15,0:15:29.86:0,30,544	0/0:14,0:14:38.98:0,39,417	0/0:9,0:8:15.87:0,16,134	0/0:26,0:23:29.74:0,30,296	1/1:0,9:9:8.94:71,9,0	1/1:9,2:11:23.95:204,24,0	1/1:16,1:17:21.34:168,21,0	0/0:21,0:21:40.15:0,40,757	0/0:25,0:24:56.27:0,56,1105	0/0:19,0:18:38.67:0,39,341	0/0:6,0:5:15.03:0,15,251
chr10	52440977	.	CCA	C	385.39	PASS	AB=0.952;AC=20;AF=0.370;AN=54;BaseQRankSum=8.808;DP=578;FS=3.988;HRun=0;HaplotypeScore=122.0389;InbreedingCoeff=0.4321;MQ=68.49;MQ0=7;MQRankSum=-7.553;QD=1.52;ReadPosRankSum=-1.610;VQSLOD=2.2581;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:32:10.84:11,0,54	./.	0/0:37,0:23:21.40:0,21,237	0/0:51,0:30:20.34:0,20,244	0/0:17,0:17:16.77:0,17,399	0/1:16,1:17:5.45:5,0,398	0/1:36,1:37:24.52:25,0,1001	1/1:23,0:23:20.76:162,21,0	0/1:18,1:17:2.44:2,0,430	0/0:18,0:17:4.59:0,5,518	0/0:9,0:9:21.07:0,21,313	1/1:16,0:16:13.63:62,14,0	1/1:15,0:13:20.18:90,20,0	0/0:20,1:21:39.02:0,39,578	1/1:25,0:25:19.50:89,20,0	1/1:16,0:16:17.23:79,17,0	0/0:38,1:39:48.72:0,49,1204	0/1:13,3:16:5.49:5,0,355	0/0:14,0:14:14.30:0,14,112	0/0:8,0:7:3.40:0,3,18	0/0:28,0:25:14.55:0,15,105	1/1:9,0:9:2.74:12,3,0	1/1:11,0:11:2.17:11,2,0	0/1:17,0:17:7.63:8,0,19	0/0:21,0:21:0.54:0,1,461	0/0:26,0:25:23.40:0,23,721	0/0:18,0:17:8.46:0,8,72	0/0:7,0:6:15.05:0,15,227
chr10	52440999	.	ACG	A	3082.19	PASS	AB=0.994;AC=26;AF=0.481;AN=54;BaseQRankSum=12.348;DP=605;FS=2.232;HRun=0;HaplotypeScore=125.5493;InbreedingCoeff=0.6791;MQ=49.19;MQ0=12;MQRankSum=-5.369;QD=9.23;ReadPosRankSum=-4.029;VQSLOD=2.7055;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:32,4:35:50.21:385,50,0	./.	0/1:29,0:10:12.46:12,0,93	0/1:38,1:11:53.13:57,0,53	0/0:16,0:16:17.82:0,18,491	0/0:17,0:17:23.33:0,23,553	0/0:35,0:35:34:0,34,1140	1/1:20,5:24:67.05:659,67,0	0/0:23,0:21:38.12:0,38,616	0/0:20,0:18:2.76:0,3,533	0/0:14,0:13:20.98:0,21,301	1/1:14,5:19:30:265,30,0	1/1:16,7:21:56.60:445,57,0	0/0:23,0:23:53.60:0,54,754	1/1:17,7:24:62.95:538,63,0	1/1:15,6:21:38.91:336,39,0	0/0:41,0:41:56.48:0,56,1357	0/0:18,0:18:31.88:0,32,514	1/1:15,0:15:8.28:119,8,0	0/1:6,0:5:1.31:19,0,1	1/1:34,0:30:13.88:85,14,0	1/1:9,1:10:2.14:42,2,0	1/1:12,2:14:8.91:67,9,0	1/1:24,1:25:26.73:221,27,0	0/0:22,0:22:19.03:0,19,568	0/0:34,0:32:77.43:0,77,922	0/1:14,0:13:4.30:34,0,4	0/0:6,0:5:15.05:0,15,283
chr10	52441005	.	ACACACACG	A	2272.58	PASS	AB=1.000;AC=18;AF=0.333;AN=54;BaseQRankSum=12.113;DP=618;FS=0.460;HRun=0;HaplotypeScore=182.5170;InbreedingCoeff=0.4842;MQ=50.91;MQ0=14;MQRankSum=-6.054;QD=9.05;ReadPosRankSum=-2.267;VQSLOD=2.0785;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:36,0:35:14.92:181,15,0	./.	0/0:27,0:9:14.72:0,15,239	0/0:35,0:7:12.74:0,13,119	0/1:16,0:16:19.89:20,0,918	0/0:16,0:16:39.02:0,39,1095	0/0:33,0:33:86.96:0,87,2108	0/1:27,0:26:99:109,0,112	0/0:22,0:20:45.08:0,45,1392	0/0:19,0:17:42.14:0,42,1419	0/0:15,0:14:12.04:0,12,475	1/1:21,0:21:20.92:234,21,0	0/1:26,0:24:53.83:361,0,54	0/0:26,0:26:63.20:0,63,1885	1/1:25,1:26:53.99:724,54,0	1/1:16,6:22:30.23:494,30,0	0/0:43,0:43:99:0,102,2977	0/0:17,0:17:41.16:0,41,1233	0/1:15,0:15:40.57:41,0,382	0/1:9,0:8:17.96:18,0,78	0/0:33,0:29:11.99:0,12,219	0/1:12,0:12:3.74:41,0,4	1/1:15,0:15:6.01:67,6,0	1/1:26,0:26:20.45:173,20,0	0/0:21,0:21:45.04:0,45,1360	0/0:32,0:30:77.56:0,78,2517	0/0:16,0:15:9.03:0,9,234	0/0:8,0:7:21.07:0,21,732
chr10	52441007	.	ACACACG	A	2836	PASS	AB=1.000;AC=21;AF=0.389;AN=54;BaseQRankSum=12.303;DP=608;FS=0.938;HRun=0;HaplotypeScore=160.1728;InbreedingCoeff=0.5922;MQ=52.15;MQ0=13;MQRankSum=-5.936;QD=10.39;ReadPosRankSum=-2.504;VQSLOD=2.6518;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:37,0:36:39.82:429,40,0	./.	0/1:26,0:8:2.63:3,0,205	0/0:35,0:9:18.67:0,19,150	0/1:16,0:16:7.94:8,0,717	0/0:16,0:16:39.02:0,39,915	0/0:33,0:33:89.97:0,90,1834	0/1:25,0:24:29.51:127,0,30	0/0:21,0:19:45.08:0,45,1168	0/0:18,0:16:39.60:0,40,1172	0/0:15,0:14:12.04:0,12,380	1/1:21,0:21:20.62:361,21,0	1/1:24,1:23:34.08:547,34,0	0/0:25,0:25:62.99:0,63,1585	1/1:19,6:25:54.01:643,54,0	1/1:20,0:20:30.31:418,30,0	0/0:42,0:42:99:0,102,2470	0/0:17,0:17:45.04:0,45,1103	0/1:14,0:14:42.74:43,0,241	0/1:9,0:8:17.96:18,0,52	0/0:34,0:30:8.50:0,9,124	1/1:12,0:12:7.26:94,7,0	1/1:17,0:17:5.97:84,6,0	1/1:26,0:26:25.96:258,26,0	0/0:21,0:21:44.11:0,44,1094	0/0:31,0:29:80.56:0,81,2064	0/0:16,0:15:9.03:0,9,162	0/0:8,0:7:21.07:0,21,608
chr10	52441009	.	ACACG	A	2471.96	PASS	AB=1.000;AC=22;AF=0.407;AN=54;BaseQRankSum=12.334;DP=593;FS=3.118;HRun=0;HaplotypeScore=139.6715;InbreedingCoeff=0.6259;MQ=52.16;MQ0=13;MQRankSum=-6.566;QD=8.44;ReadPosRankSum=-3.118;VQSLOD=2.5502;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:30,4:33:41.46:352,41,0	./.	0/0:27,0:8:14.53:0,15,207	0/1:36,0:10:17.85:18,0,87	0/0:16,0:16:4.19:0,4,552	0/0:16,0:16:16.85:0,17,719	0/0:33,0:33:89.90:0,90,1459	1/1:25,0:24:8.81:170,9,0	0/0:19,0:17:45.01:0,45,952	0/0:18,0:16:14.34:0,14,916	0/0:13,0:12:12.04:0,12,284	1/1:18,1:19:20.78:250,21,0	1/1:23,1:22:54.10:505,54,0	0/0:23,0:23:62.30:0,62,1285	1/1:24,0:24:56.45:559,56,0	1/1:18,0:18:32.90:365,33,0	0/0:42,0:42:70.95:0,71,1858	0/0:17,0:17:45.10:0,45,952	0/1:14,0:14:50.11:50,0,88	0/1:10,0:9:17.96:18,0,26	0/1:34,0:30:10.20:10,0,52	1/1:12,0:12:8.62:85,9,0	1/1:17,0:17:5.95:58,6,0	1/1:26,0:26:26.47:233,26,0	0/0:21,0:21:26.72:0,27,853	0/0:30,0:28:80.46:0,80,1617	0/0:15,0:14:8.99:0,9,87	0/0:8,0:7:21.07:0,21,486
chr10	52441011	.	ACG	A	2336.44	PASS	AB=0.826;AC=23;AF=0.426;AN=54;BaseQRankSum=13.373;DP=588;FS=7.331;HRun=0;HaplotypeScore=122.0054;InbreedingCoeff=0.7569;MQ=52.51;MQ0=11;MQRankSum=-4.819;QD=8.14;ReadPosRankSum=-1.707;VQSLOD=2.2759;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:34,0:33:47.78:376,48,0	./.	0/0:26,0:8:17.40:0,17,158	0/1:36,0:10:24.36:24,0,88	0/0:16,0:16:16:0,16,402	0/0:17,0:17:19.81:0,20,558	0/0:33,0:33:73.06:0,73,1041	1/1:25,0:24:23.04:205,23,0	0/0:19,0:17:27.01:0,27,681	0/0:17,0:15:11.80:0,12,640	0/0:12,0:11:11.83:0,12,164	1/1:14,4:18:20.92:188,21,0	1/1:18,5:21:54.47:418,54,0	0/0:26,0:26:23.65:0,24,942	1/1:23,0:23:59.94:510,60,0	1/1:18,0:18:32.92:287,33,0	0/0:42,0:42:28.69:0,29,1281	0/0:17,0:17:45.08:0,45,738	1/1:14,0:14:23.48:164,23,0	0/1:2,7:9:1.28:19,0,1	1/1:34,0:31:7.95:41,8,0	0/1:10,1:11:7.51:44,0,8	1/1:2,14:16:5.95:46,6,0	1/1:25,1:26:26.73:220,27,0	0/0:22,0:22:15.99:0,16,612	0/0:31,0:29:32.67:0,33,1085	0/0:14,0:13:4.88:0,5,15	0/0:8,0:7:20.94:0,21,324
chr10	52441013	.	GCA	G	539.37	PASS	AB=0.956;AC=20;AF=0.370;AN=54;BaseQRankSum=8.470;DP=580;FS=20.827;HRun=0;HaplotypeScore=127.3950;InbreedingCoeff=0.5060;MQ=52.74;MQ0=11;MQRankSum=-5.255;QD=1.87;ReadPosRankSum=2.447;VQSLOD=1.2543;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:34,0:33:3.95:22,4,0	./.	0/0:26,0:9:18.05:0,18,246	0/0:37,0:13:23.61:0,24,242	0/0:16,0:16:18.69:0,19,335	0/0:18,0:18:33.11:0,33,529	0/0:30,1:31:21.52:0,22,774	1/1:22,2:23:29.44:310,29,0	0/0:18,1:17:2.23:0,2,544	0/0:16,0:14:39.06:0,39,571	0/0:12,0:11:6.05:0,6,112	1/1:20,0:20:13.70:62,14,0	1/1:23,0:21:1.74:74,2,0	0/1:23,1:24:4.04:4,0,885	1/1:22,0:22:16.79:84,17,0	1/1:18,0:18:17.22:79,17,0	0/1:39,1:40:12.02:12,0,1095	0/0:16,0:16:39.12:0,39,598	0/0:13,0:13:21.95:0,22,142	0/0:9,0:9:3:0,3,25	0/0:33,0:30:8.33:0,8,55	0/1:11,0:11:7.34:7,0,10	1/1:15,0:15:2.74:12,3,0	1/1:26,0:26:2.08:12,2,0	0/0:22,0:22:39.11:0,39,571	0/1:28,4:30:36.44:36,0,950	0/0:14,0:13:8.97:0,9,71	0/0:8,0:7:21.07:0,21,327
chr10	52441024	.	C	CAT	1794.63	PASS	AB=0.793;AC=20;AF=0.370;AN=54;BaseQRankSum=10.266;DP=594;FS=9.671;HRun=0;HaplotypeScore=128.9238;InbreedingCoeff=0.6163;MQ=60.04;MQ0=8;MQRankSum=-2.043;QD=7.21;ReadPosRankSum=2.637;VQSLOD=3.0390;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:33,0:33:1.11:327,1,0	./.	0/0:29,0:16:35.85:0,36,398	0/0:29,0:18:48.99:0,49,496	0/0:17,0:17:39.02:0,39,491	0/0:15,0:15:39.10:0,39,549	0/0:29,0:29:78.11:0,78,1009	0/0:27,0:27:68.81:0,69,513	0/0:21,0:19:54.05:0,54,681	0/0:21,0:21:54.56:0,55,716	0/0:12,0:11:12.02:0,12,152	1/1:23,0:23:1.40:13,1,0	1/1:20,0:20:44.07:271,44,0	0/0:24,0:24:69.15:0,69,985	1/1:21,0:21:49.03:381,49,0	1/1:19,0:19:42.53:266,43,0	0/0:42,0:42:99:0,110,1397	0/0:18,0:18:48.90:0,49,636	0/1:17,0:17:35.94:186,0,36	1/1:8,0:9:6.01:59,6,0	0/1:12,23:35:14.89:104,0,15	0/1:13,0:13:2.30:23,0,2	1/1:16,0:16:7.81:55,8,0	1/1:26,0:26:27.93:239,28,0	0/0:19,0:19:48.08:0,48,622	0/0:34,0:33:99:0,99,1235	0/1:4,0:15:9.95:58,0,10	0/0:8,0:8:21.07:0,21,320
chr10	52441025	.	A	ATATA	2564.54	PASS	AB=1.000;AC=20;AF=0.370;AN=54;BaseQRankSum=9.082;DP=599;FS=4.134;HRun=0;HaplotypeScore=146.3504;InbreedingCoeff=0.6143;MQ=61.83;MQ0=8;MQRankSum=-1.985;QD=10.22;ReadPosRankSum=3.195;VQSLOD=3.0751;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:33:54.29:54,0,112	./.	0/0:31,0:18:36.01:0,36,597	0/0:29,0:18:49.07:0,49,754	0/0:17,0:17:39.09:0,39,675	0/0:14,0:14:39.12:0,39,729	0/0:29,0:29:78.24:0,78,1426	0/0:27,0:27:69.59:0,70,959	0/0:21,0:19:54.15:0,54,937	0/0:22,0:22:54.66:0,55,1028	0/0:12,0:11:12.04:0,12,220	1/1:6,16:24:5.73:27,6,0	1/1:22,0:22:51.08:574,51,0	0/0:24,0:24:69.23:0,69,1321	1/1:21,0:21:56.28:761,56,0	1/1:19,0:19:44.70:473,45,0	0/0:42,0:42:99:0,111,1908	0/0:18,0:18:51.17:0,51,919	0/1:17,0:17:13.67:14,0,98	1/1:9,0:9:3.48:45,3,0	0/1:37,0:35:38.57:55,0,39	0/1:13,0:13:41.68:72,0,42	1/1:16,0:16:8.62:110,9,0	1/1:26,0:26:28.77:465,29,0	0/0:20,0:20:48.15:0,48,876	0/0:34,0:33:99:0,99,1764	1/1:14,0:14:9.02:109,9,0	0/0:8,0:8:21.07:0,21,419
chr10	52441350	.	T	TTACA	2246.91	PASS	AB=1.000;AC=20;AF=0.357;AN=56;BaseQRankSum=1.954;DP=462;FS=0.492;HRun=0;HaplotypeScore=93.3090;InbreedingCoeff=0.4696;MQ=74.67;MQ0=8;MQRankSum=1.083;QD=11.46;ReadPosRankSum=1.417;VQSLOD=2.9600;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:27:47.59:364,48,0	1/1:1,8:9:3.01:80,3,0	0/0:44,0:21:57.02:0,57,536	0/0:36,0:27:65.97:0,66,632	0/0:17,0:17:36.31:0,36,293	0/0:12,0:12:26.95:0,27,219	0/0:18,0:18:35.61:0,36,346	0/0:15,0:14:33.38:0,33,277	0/0:9,0:9:23.33:0,23,206	0/0:21,0:20:50:0,50,421	0/0:18,0:18:40.25:0,40,340	1/1:14,0:14:15.65:179,16,0	0/1:12,0:12:15.50:146,0,16	0/0:15,0:15:41.98:0,42,466	1/1:9,0:9:3.01:61,3,0	1/1:22,0:22:41.82:508,42,0	0/0:22,0:22:37.57:0,38,417	0/0:12,0:12:32.75:0,33,239	0/1:5,0:5:16.93:65,0,17	0/1:9,0:9:24.52:25,0,79	0/1:23,0:22:87.67:145,0,88	1/1:16,0:16:17.69:266,18,0	1/1:9,0:9:20.97:172,21,0	0/1:30,0:30:72.05:355,0,72	0/0:6,0:6:17.99:0,18,179	0/0:16,0:16:44.87:0,45,380	0/1:11,0:11:70.44:74,0,70	0/0:5,0:5:15:0,15,167
chr10	52441351	.	T	TACATACAC	2646.60	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=2.643;DP=496;FS=1.553;HRun=0;HaplotypeScore=141.8133;InbreedingCoeff=0.2263;MQ=71.66;MQ0=10;MQRankSum=-1.776;QD=10.98;ReadPosRankSum=0.638;VQSLOD=2.8239;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:31,0:31:49.41:370,49,0	1/1:11,0:11:3.48:35,3,0	0/0:44,0:21:57.02:0,57,536	0/0:35,0:26:65.97:0,66,632	0/0:17,0:17:35.84:0,36,292	0/0:13,0:13:26.85:0,27,218	0/0:16,0:17:34.48:0,34,376	0/0:16,0:15:33.38:0,33,278	0/0:11,0:11:23.33:0,23,215	0/0:23,0:21:46.66:0,47,415	0/0:18,0:18:39.79:0,40,366	0/1:12,0:13:7.11:160,0,7	0/1:11,0:11:71.21:146,0,71	0/0:17,0:18:41.97:0,42,580	1/1:3,7:14:4.37:134,4,0	1/1:24,0:24:41.43:581,41,0	0/1:16,0:24:30.82:31,0,543	0/0:13,0:13:4.88:0,5,209	0/1:6,0:6:14.92:111,0,15	0/1:10,0:10:74.60:75,0,79	0/1:25,0:24:87.59:193,0,88	0/1:17,0:17:33.07:245,0,33	1/1:9,0:9:20.97:172,21,0	0/1:29,0:31:99:349,0,300	0/0:8,0:8:17.99:0,18,207	0/0:17,0:17:44.20:0,44,378	0/1:14,0:14:60:228,0,60	0/0:4,0:5:15:0,15,224
chr10	52442099	.	AT	A	4271.93	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=14.187;DP=594;FS=6.251;HRun=10;HaplotypeScore=71.9831;InbreedingCoeff=0.9269;MQ=77.03;MQ0=1;MQRankSum=-0.422;QD=14.05;ReadPosRankSum=0.080;VQSLOD=4.8342;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,16:19:48.78:410,49,0	1/1:1,5:6:15:130,15,0	0/0:19,0:16:17.71:0,18,166	0/1:14,0:14:10.50:11,0,145	0/0:34,0:34:93.25:0,93,1029	0/0:21,0:21:60.16:0,60,663	0/0:18,1:19:24.64:0,25,504	1/1:9,20:29:59.97:521,60,0	0/0:14,1:15:16.03:0,16,388	0/0:27,0:27:72.18:0,72,784	0/0:23,1:24:34.10:0,34,597	1/1:1,19:20:53.99:469,54,0	1/1:4,19:23:47.98:417,48,0	0/0:27,0:27:75.20:0,75,824	1/1:3,16:19:41.99:365,42,0	1/1:2,18:20:50.98:443,51,0	0/0:11,0:11:30.08:0,30,332	0/0:15,0:15:42.11:0,42,465	1/1:6,0:33:54.23:164,54,0	1/1:7,0:36:57.03:168,57,0	1/1:1,0:9:16.29:48,16,0	1/1:1,16:17:44.93:384,45,0	1/1:2,19:21:47.94:410,48,0	1/1:2,11:13:23.98:208,24,0	0/0:26,0:25:66.15:0,66,714	0/0:34,1:35:64.15:0,64,912	1/1:1,0:24:42.77:126,43,0	0/0:17,0:17:39.11:0,39,431
chr10	52444713	.	AACACAC	A	3659.71	PASS	AB=0.684;AC=23;AF=0.426;AN=54;BaseQRankSum=6.079;DP=338;FS=9.989;HRun=0;HaplotypeScore=78.8006;InbreedingCoeff=0.8075;MQ=72.74;MQ0=5;MQRankSum=-9.348;QD=32.10;ReadPosRankSum=2.629;VQSLOD=2.2021;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:26.77:0,27,801	1/1:1,1:2:3.01:64,3,0	0/0:37,0:28:36.10:0,36,975	0/0:27,0:20:40.01:0,40,1050	0/0:11,0:10:18.06:0,18,600	0/0:12,0:12:27.09:0,27,876	0/0:17,0:17:36.12:0,36,1184	0/1:14,0:26:50.83:410,0,51	0/0:7,0:7:15.05:0,15,500	0/0:14,0:14:30.10:0,30,995	0/0:9,0:11:27.09:0,27,879	1/1:1,6:7:18.06:383,18,0	1/1:6,9:15:30.10:631,30,0	0/0:7,0:7:21.07:0,21,695	1/1:3,4:7:9.03:192,9,0	1/1:5,6:11:18.06:383,18,0	0/0:8,0:19:27.09:0,27,704	0/0:3,0:14:21.07:0,21,553	./.	1/1:2,12:14:33.01:574,33,0	1/1:5,3:8:3.01:64,3,0	1/1:3,5:8:9.03:168,9,0	1/1:0,4:4:12.04:256,12,0	1/1:4,0:4:2.99:24,3,0	0/0:9,0:9:24.08:0,24,791	0/0:12,0:12:27.09:0,27,886	1/1:1,7:8:24.08:511,24,0	0/0:6,0:5:9.03:0,9,293
chr10	52444757	.	T	TTA	761.93	PASS	AC=12;AF=0.300;AN=40;BaseQRankSum=4.184;DP=189;FS=0.000;HRun=0;HaplotypeScore=44.8272;InbreedingCoeff=0.7141;MQ=70.91;MQ0=0;MQRankSum=-3.903;QD=16.21;ReadPosRankSum=-3.420;VQSLOD=2.6396;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,1:5:9.01:105,9,0	1/1:0,0:2:6:52,6,0	0/0:8,0:7:5.79:0,6,52	0/0:11,0:7:1.25:0,1,3	0/0:7,0:7:21.02:0,21,219	0/0:13,0:14:29.92:0,30,344	0/0:8,0:8:12.04:0,12,147	1/1:17,8:26:45.04:624,45,0	0/0:3,0:3:6.02:0,6,73	0/0:6,0:6:12.04:0,12,144	0/0:9,0:9:15.03:0,15,171	./.	./.	0/0:4,0:4:6.02:0,6,73	1/1:2,0:3:3:26,3,0	./.	0/0:17,0:17:24.07:0,24,290	0/0:10,0:12:29.79:0,30,319	1/1:3,0:3:5.98:48,6,0	./.	./.	./.	./.	./.	0/0:6,0:6:12.04:0,12,147	0/0:7,0:7:21.07:0,21,257	1/1:7,1:8:3.01:46,3,0	0/0:5,0:4:9.02:0,9,98
chr10	52444802	.	GTATATATGTATA	G	107.55	PASS	AB=0.911;AC=11;AF=0.239;AN=46;BaseQRankSum=2.328;DP=134;FS=13.164;HRun=0;HaplotypeScore=58.1446;InbreedingCoeff=0.2568;MQ=64.48;MQ0=1;MQRankSum=-1.585;QD=2.15;ReadPosRankSum=-1.585;VQSLOD=0.1380;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:4,0:4:0:0,0,0	0/1:1,2:3:0:0,0,0	0/0:7,0:2:2.98:0,3,22	0/0:23,0:7:1.82:0,2,5	0/0:2,0:2:3.01:0,3,127	0/0:8,0:8:15.05:0,15,836	0/0:3,0:3:2.88:0,3,80	0/1:18,0:17:11.40:11,0,708	0/0:1,0:1:3.01:0,3,121	0/0:2,0:2:3.01:0,3,78	0/0:3,0:3:6.02:0,6,228	0/1:3,0:3:0:0,0,0	0/1:6,0:6:0.16:1,0,0	0/0:1,0:1:3.01:0,3,46	0/1:1,2:3:0:0,0,0	1/1:1,4:5:3.01:73,3,0	0/0:8,0:8:18.06:0,18,848	0/0:11,0:11:24.08:0,24,1015	0/1:5,0:5:5.89:113,0,6	./.	./.	0/1:2,0:2:0:0,0,0	0/1:1,0:1:0:0,0,0	./.	0/0:7,0:7:18.06:0,18,697	0/0:3,0:3:6.02:0,6,230	./.	./.
chr10	52445663	.	C	CTT	3720.44	PASS	AB=0.647;AC=23;AF=0.411;AN=56;BaseQRankSum=-0.682;DP=639;FS=0.396;HRun=11;HaplotypeScore=74.5686;InbreedingCoeff=0.7704;MQ=67.14;MQ0=7;MQRankSum=-0.958;QD=12.74;ReadPosRankSum=2.507;VQSLOD=1.9083;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:12,37:49:15.52:801,0,16	1/1:2,13:16:33.11:464,33,0	0/0:29,0:18:19.34:0,19,154	0/0:15,0:11:5.27:0,5,30	0/0:28,0:28:54.01:0,54,517	0/0:15,0:15:33.03:0,33,318	0/0:23,0:25:59.17:0,59,534	0/0:28,0:29:32.44:0,32,342	0/0:22,0:23:58.05:0,58,538	0/0:24,0:27:17.47:0,17,386	0/0:15,0:16:29.69:0,30,263	1/1:4,14:18:14.94:169,15,0	1/1:8,15:24:21.86:239,22,0	0/0:16,0:18:32.99:0,33,320	1/1:4,15:22:32.07:393,32,0	0/1:9,10:20:2.43:286,0,2	0/0:41,0:43:89.50:0,89,876	0/0:15,0:14:26.45:0,26,240	0/1:16,0:23:3.49:65,0,3	1/1:7,0:22:33.38:134,33,0	1/1:3,0:6:7.49:26,7,0	1/1:5,5:12:3.45:122,3,0	1/1:9,14:25:35.09:451,35,0	1/1:3,17:20:30.10:435,30,0	0/0:20,0:21:40.81:0,41,444	0/0:22,0:24:53.48:0,53,489	1/1:4,1:27:11.95:135,12,0	0/0:11,0:12:26.75:0,27,244
chr10	52446955	.	CAA	C	5740.52	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=15.078;DP=658;FS=2.277;HRun=12;HaplotypeScore=124.5525;InbreedingCoeff=0.9937;MQ=76.34;MQ0=2;MQRankSum=-2.896;QD=17.34;ReadPosRankSum=7.890;VQSLOD=3.0932;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:1,26:28:37.12:637,37,0	1/1:0,12:13:29.80:357,30,0	0/0:17,0:16:17.52:0,18,183	0/0:19,0:23:11.72:0,12,172	0/0:24,0:24:63.17:0,63,860	0/0:19,0:20:51.12:0,51,666	0/0:14,0:15:39.02:0,39,481	0/0:6,0:25:50.51:0,51,193	0/0:24,0:24:63.19:0,63,898	0/0:19,0:21:50.07:0,50,607	0/0:14,0:14:30.10:0,30,434	1/1:6,0:27:49.36:214,49,0	1/1:4,0:21:43.65:187,44,0	0/0:27,0:30:71.09:0,71,995	1/1:1,36:37:77.75:793,78,0	1/1:2,19:22:53.85:531,54,0	0/0:21,0:23:65.70:0,66,925	0/0:21,0:22:59.67:0,60,810	1/1:3,14:18:44.80:437,45,0	1/1:5,18:23:25.23:462,25,0	1/1:6,21:27:49.81:517,50,0	1/1:2,0:21:43.02:188,43,0	1/1:1,0:13:26.96:118,27,0	1/1:3,0:35:74.09:321,74,0	0/0:2,0:22:39.05:0,39,386	0/0:24,0:26:71.17:0,71,922	1/1:5,39:46:92.46:979,92,0	0/0:18,0:18:42.12:0,42,598
chr10	52449838	.	GGA	G	94.86	PASS	AB=0.917;AC=8;AF=0.167;AN=48;BaseQRankSum=1.748;DP=493;FS=2.718;HRun=0;HaplotypeScore=79.0564;InbreedingCoeff=-0.0428;MQ=65.98;MQ0=10;MQRankSum=-0.827;QD=0.76;ReadPosRankSum=1.470;VQSLOD=1.6463;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:21:4.88:20,5,0	0/1:8,1:9:25.97:26,0,31	./.	./.	0/0:15,0:15:3.01:0,3,41	0/0:22,0:21:9.02:0,9,111	0/0:21,0:21:17.63:0,18,208	0/0:19,0:18:2.98:0,3,21	0/1:12,1:13:19.95:20,0,97	0/1:11,0:12:5.12:5,0,68	./.	0/0:12,0:20:3:0,3,26	0/0:11,0:11:14.82:0,15,130	0/1:22,1:23:22.97:23,0,60	0/0:20,0:20:9:0,9,85	0/0:17,0:17:5.74:0,6,75	0/1:23,4:28:99:109,0,159	0/1:16,1:17:10.60:11,0,176	0/0:17,0:17:11.97:0,12,97	0/0:16,0:16:0:0,0,0	0/0:22,0:21:8.67:0,9,61	0/0:19,0:19:5.94:0,6,44	0/0:12,0:12:12.01:0,12,119	0/0:26,0:25:31.16:0,31,248	0/0:13,0:13:3.01:0,3,43	0/0:14,0:14:3.01:0,3,44	0/0:12,0:12:14.93:0,15,140	./.
chr10	52450006	.	GA	G	469.65	PASS	AB=0.888;AC=4;AF=0.074;AN=54;BaseQRankSum=6.203;DP=616;FS=1.922;HRun=11;HaplotypeScore=68.3592;InbreedingCoeff=0.4306;MQ=73.57;MQ0=0;MQRankSum=0.399;QD=6.81;ReadPosRankSum=-2.808;VQSLOD=1.4948;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:66.15:0,66,694	0/0:9,0:9:27.07:0,27,288	0/0:20,0:18:17.62:0,18,159	0/1:13,1:14:18.42:18,0,123	0/0:37,2:39:71.59:0,72,958	0/1:20,3:24:8.10:8,0,499	0/0:24,0:24:66.03:0,66,671	1/1:5,22:29:69.98:554,70,0	0/0:24,0:24:51.24:0,51,608	0/0:17,0:17:33.08:0,33,350	0/0:20,0:21:50.96:0,51,526	0/0:16,0:16:36.08:0,36,376	0/0:18,0:18:42.08:0,42,433	0/0:24,1:26:47.36:0,47,687	0/0:27,0:27:69.17:0,69,729	0/0:21,2:24:7.67:0,8,469	0/0:27,0:27:75.15:0,75,778	0/0:14,1:15:14.42:0,14,348	0/0:22,1:25:7.84:0,8,470	0/0:21,1:22:26.47:0,26,479	0/0:14,0:15:38.93:0,39,398	0/0:21,1:23:18.96:0,19,517	0/0:25,1:27:44.14:0,44,636	0/0:21,1:22:26.45:0,26,471	0/0:27,1:28:50.53:0,51,724	0/0:27,0:27:63.14:0,63,660	0/0:25,0:25:48.23:0,48,656	./.
chr10	52450444	.	AC	A	933.61	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.272;DP=619;FS=1.521;HRun=3;HaplotypeScore=68.3306;InbreedingCoeff=0.8921;MQ=88.31;MQ0=0;MQRankSum=0.333;QD=26.67;ReadPosRankSum=-3.891;VQSLOD=1.8157;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,154,2197	0/0:5,0:5:15.05:0,15,216	0/0:23,0:23:66.15:0,66,806	0/0:26,0:26:67.48:0,67,941	0/0:26,0:26:75.25:0,75,1079	0/0:16,0:16:45.13:0,45,628	0/0:18,0:18:51.17:0,51,732	1/1:6,29:35:87.22:1028,87,0	0/0:16,0:16:45.15:0,45,645	0/0:28,0:28:84.28:0,84,1209	0/0:16,0:16:48.16:0,48,691	0/0:20,0:20:60.20:0,60,863	0/0:11,0:11:33.09:0,33,456	0/0:27,0:27:78.26:0,78,1123	0/0:22,0:22:63.20:0,63,890	0/0:26,0:26:72.23:0,72,1018	0/0:33,0:33:99:0,99,1421	0/0:14,0:14:39.13:0,39,560	0/0:25,0:25:75.16:0,75,1034	0/0:26,0:26:78.25:0,78,1102	0/0:29,0:29:81.26:0,81,1145	0/0:21,0:21:60.19:0,60,844	0/0:19,0:19:54.17:0,54,758	0/0:16,0:16:48.16:0,48,691	0/0:23,0:23:60.20:0,60,864	0/0:24,0:24:72.20:0,72,982	0/0:19,0:19:57.17:0,57,800	0/0:2,0:2:6.02:0,6,86
chr10	52451291	.	TAG	T	1268.65	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.186;DP=675;FS=0.670;HRun=0;HaplotypeScore=77.0809;InbreedingCoeff=0.9979;MQ=95.98;MQ0=0;MQRankSum=-1.931;QD=39.65;ReadPosRankSum=-4.730;VQSLOD=3.5477;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:60.15:0,60,1087	0/0:8,0:8:24.08:0,24,450	0/0:36,0:36:99:0,105,1930	0/0:29,0:30:75.56:0,76,1367	0/0:31,0:31:90.29:0,90,1623	0/0:22,0:22:63.22:0,63,1180	0/0:19,0:19:54.17:0,54,979	1/1:1,31:32:93.31:1364,93,0	0/0:27,0:27:78.25:0,78,1418	0/0:24,0:24:69.23:0,69,1262	0/0:19,0:19:57.18:0,57,1035	0/0:25,0:25:72.25:0,72,1336	0/0:29,0:29:84.29:0,84,1565	0/0:39,0:39:99:0,114,2094	0/0:19,0:19:57.20:0,57,1068	0/0:23,0:23:69.22:0,69,1254	0/0:19,0:19:54.19:0,54,1011	0/0:22,0:22:66.23:0,66,1236	0/0:20,0:20:60.19:0,60,1079	0/0:25,0:25:75.21:0,75,1310	0/0:30,0:30:90.31:0,90,1685	0/0:24,0:24:69.24:0,69,1292	0/0:26,0:26:78.27:0,78,1453	0/0:19,0:19:57.20:0,57,1054	0/0:21,0:21:63.22:0,63,1155	0/0:27,0:27:78.27:0,78,1459	0/0:26,0:25:78.25:0,78,1413	0/0:13,0:13:39.13:0,39,721
chr10	52453992	.	TA	T	630.86	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=7.040;DP=579;FS=1.634;HRun=8;HaplotypeScore=54.0518;InbreedingCoeff=0.6868;MQ=75.71;MQ0=0;MQRankSum=-0.157;QD=16.18;ReadPosRankSum=0.720;VQSLOD=3.5057;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,27:27:75.12:724,75,0	0/0:12,0:12:33.10:0,33,399	0/0:12,0:12:23.98:0,24,257	0/1:12,0:12:7.19:7,0,167	0/0:35,0:35:99:0,99,1184	0/0:18,0:18:51.14:0,51,605	0/0:16,0:16:45.14:0,45,544	0/0:40,0:40:99:0,108,1265	0/0:11,0:11:33.10:0,33,399	0/0:21,0:21:54.15:0,54,632	0/0:18,0:18:51.15:0,51,606	0/0:15,0:15:45.14:0,45,544	0/0:23,0:23:66.20:0,66,797	0/0:23,0:23:66.19:0,66,787	0/0:21,0:21:54.15:0,54,641	0/0:24,0:24:66.20:0,66,797	0/0:20,0:20:54.15:0,54,641	0/0:19,0:19:54.17:0,54,652	0/0:30,0:30:81.24:0,81,968	0/0:24,0:24:63.19:0,63,761	0/0:11,0:13:32.83:0,33,355	0/0:17,0:17:51.16:0,51,614	0/0:15,0:15:33.10:0,33,399	0/0:14,0:14:42.13:0,42,507	0/0:26,0:26:66.20:0,66,797	0/0:22,0:22:54.17:0,54,652	0/0:40,0:40:99:0,102,1221	0/0:11,0:11:33.10:0,33,391
chr10	52456025	.	CAGACAGACAGACAGACAG	C	1597.04	PASS	AB=1.000;AC=12;AF=0.231;AN=52;BaseQRankSum=2.873;DP=526;FS=23.275;HRun=0;HaplotypeScore=198.0841;InbreedingCoeff=0.5904;MQ=58.61;MQ0=15;MQRankSum=0.007;QD=15.21;ReadPosRankSum=0.401;VQSLOD=0.9788;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:27:9.02:51,9,0	0/0:6,0:6:18.04:0,18,217	0/0:24,0:18:0.36:0,0,485	0/0:16,0:13:27.09:0,27,742	0/0:14,0:13:20.99:0,21,367	0/0:24,0:24:54.24:0,54,2234	0/0:39,0:37:88.37:0,88,3026	0/0:49,0:46:99:0,105,1732	0/0:24,0:21:48.16:0,48,2331	0/0:25,0:25:75.20:0,75,2879	0/0:10,0:10:18.06:0,18,1019	1/1:4,0:4:3.01:46,3,0	0/0:22,0:22:3.34:0,3,86	0/0:23,0:23:45.15:0,45,2054	0/1:17,0:17:88.57:89,0,291	0/1:18,0:18:99:157,0,300	0/0:26,0:23:57.03:0,57,845	0/0:14,0:11:28.87:0,29,475	1/1:3,0:3:9.02:204,9,0	./.	1/1:22,0:20:23.02:756,23,0	0/0:14,0:14:5.99:0,6,50	./.	0/0:36,0:36:2.99:0,3,25	0/0:10,0:10:17.82:0,18,577	0/0:15,0:13:33.07:0,33,1332	1/1:13,0:10:21.46:454,21,0	0/0:13,0:12:33.11:0,33,1410
chr10	52456027	.	GACAGACAGACAGACAGACACACACAC	G	1144.12	PASS	AB=1.000;AC=12;AF=0.250;AN=48;BaseQRankSum=4.145;DP=523;FS=16.279;HRun=0;HaplotypeScore=250.5458;InbreedingCoeff=0.3655;MQ=56.44;MQ0=17;MQRankSum=-0.707;QD=8.80;ReadPosRankSum=0.666;VQSLOD=1.1239;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:26:14.50:150,15,0	0/0:6,0:6:15.92:0,16,207	0/0:19,0:13:4.61:0,5,321	0/0:15,0:12:24.01:0,24,494	0/0:14,0:13:15.02:0,15,358	0/0:24,0:24:53.29:0,53,2319	0/0:40,0:38:82.64:0,83,2758	0/0:49,0:46:8.35:0,8,732	0/0:23,0:20:48.15:0,48,2737	0/0:25,0:24:71.27:0,71,2943	0/0:10,0:10:18.06:0,18,1052	1/1:3,0:3:3.01:71,3,0	1/1:6,15:21:1.80:7,2,0	0/0:22,0:22:45.15:0,45,2259	0/1:20,0:20:99:113,0,249	0/1:18,0:18:99:133,0,285	0/0:29,0:25:45.26:0,45,1173	0/0:14,0:11:8.70:0,9,815	1/1:2,0:2:6.02:130,6,0	./.	0/1:26,0:24:48.17:416,0,48	./.	./.	./.	0/0:10,0:10:12.04:0,12,607	0/0:14,0:12:36.12:0,36,1369	0/1:13,0:10:20.22:268,0,20	0/0:14,0:12:33.11:0,33,1511
chr10	52456037	.	CAG	C	1232.83	PASS	AB=1.000;AC=14;AF=0.280;AN=50;BaseQRankSum=8.156;DP=508;FS=27.826;HRun=0;HaplotypeScore=86.3525;InbreedingCoeff=0.0329;MQ=49.35;MQ0=23;MQRankSum=1.198;QD=5.90;ReadPosRankSum=3.979;VQSLOD=1.4283;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:9,18:25:0.47:1,0,0	1/1:5,0:5:14.57:106,15,0	0/0:6,0:4:5.89:0,6,73	0/0:6,1:6:2.39:0,2,150	0/0:12,0:11:8.88:0,9,60	0/0:24,0:24:48.98:0,49,759	0/0:37,0:35:73.77:0,74,1174	0/1:38,0:35:67.35:67,0,642	0/0:23,0:20:48.16:0,48,844	0/0:28,0:26:78.17:0,78,1208	0/0:11,0:10:18.06:0,18,329	0/1:6,0:6:15.19:15,0,23	0/0:18,0:18:6.02:0,6,79	0/0:23,0:23:45:0,45,726	0/1:23,0:23:99:260,0,121	0/1:19,0:19:79.87:280,0,80	0/1:28,0:22:25.42:337,0,25	0/1:18,0:14:65.92:130,0,66	1/1:2,0:2:5.91:38,6,0	0/0:7,0:7:2.98:0,3,22	0/1:26,0:23:55.76:101,0,56	./.	./.	./.	0/0:11,0:10:20.79:0,21,279	0/0:16,0:14:35.93:0,36,516	0/1:17,0:13:43.02:43,0,134	0/0:15,0:12:33:0,33,469
chr10	52456041	.	CAG	C	1427.07	PASS	AB=0.955;AC=22;AF=0.423;AN=52;BaseQRankSum=8.181;DP=521;FS=16.165;HRun=0;HaplotypeScore=87.3137;InbreedingCoeff=0.2847;MQ=48.59;MQ0=26;MQRankSum=-0.716;QD=5.19;ReadPosRankSum=0.489;VQSLOD=1.7058;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:31,0:29:0.47:1,0,0	1/1:5,0:5:14.87:112,15,0	0/0:4,0:2:3:0,3,27	0/0:5,0:4:8.84:0,9,68	0/1:7,5:11:16.28:16,0,26	0/0:24,0:24:41.22:0,41,387	0/0:38,0:36:22.54:0,23,423	1/1:37,0:33:19.78:155,20,0	0/0:23,0:20:47.97:0,48,449	0/0:28,0:26:38.23:0,38,418	0/0:12,0:10:14.99:0,15,138	1/1:6,0:6:5.68:29,6,0	0/1:18,0:18:2.63:3,0,27	0/0:22,0:22:8.96:0,9,302	0/1:23,0:23:99:244,0,99	0/1:19,0:19:15.25:284,0,15	1/1:29,0:23:16.28:351,16,0	1/1:20,0:15:5.48:141,5,0	0/1:6,0:6:0.14:30,0,0	1/1:7,0:7:2.84:14,3,0	0/1:29,0:26:2.17:113,0,2	./.	./.	0/0:39,0:37:5.99:0,6,52	0/0:12,0:11:1.68:0,2,136	0/1:14,1:13:25.10:25,0,143	0/1:18,0:14:13.15:75,0,13	0/0:13,1:11:13.83:0,14,172
chr10	52456043	.	GAC	G	527.83	PASS	AB=0.927;AC=18;AF=0.391;AN=46;BaseQRankSum=0.759;DP=535;FS=17.318;HRun=0;HaplotypeScore=96.0815;InbreedingCoeff=-0.0555;MQ=48.51;MQ0=27;MQRankSum=1.418;QD=1.86;ReadPosRankSum=-0.091;VQSLOD=0.8448;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:30:6.44:0,6,46	./.	./.	./.	0/0:13,0:12:8.77:0,9,100	0/0:23,1:24:17.85:0,18,184	0/1:36,1:35:25.44:25,0,36	0/0:36,0:32:1.25:0,1,3	0/0:25,2:24:23.77:0,24,271	0/1:24,3:25:33.07:52,0,33	0/0:11,1:10:2.90:0,3,16	1/1:3,5:7:8.87:88,9,0	0/1:17,1:18:8.93:25,0,9	0/1:20,1:21:20.26:20,0,116	0/0:22,1:23:1.43:0,1,32	0/1:18,1:19:16.90:37,0,17	0/1:24,5:23:2.53:82,0,3	1/1:19,2:16:8.97:75,9,0	0/0:7,0:7:2.98:0,3,22	1/1:8,1:9:6:56,6,0	0/1:30,2:28:6.06:53,0,6	./.	./.	0/0:38,2:38:5.47:0,5,29	0/1:11,2:12:14.26:14,0,175	0/1:14,1:13:34.39:34,0,41	1/1:12,6:14:2.87:88,3,0	0/1:16,1:14:17.34:17,0,112
chr10	52457933	.	CGT	C	432.57	PASS	AB=0.953;AC=18;AF=0.391;AN=46;BaseQRankSum=3.473;DP=631;FS=0.907;HRun=0;HaplotypeScore=92.4019;InbreedingCoeff=0.1123;MQ=69.12;MQ0=12;MQRankSum=0.178;QD=1.68;ReadPosRankSum=1.924;VQSLOD=1.0627;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:21.04:0,21,264	1/1:8,0:10:5.68:28,6,0	./.	./.	0/1:20,0:20:13.46:13,0,76	0/0:23,0:22:6.01:0,6,67	0/0:18,0:19:5.70:0,6,84	./.	0/1:21,0:21:10.47:10,0,96	0/1:23,0:22:11.61:12,0,78	0/0:18,0:17:9.02:0,9,113	1/1:12,2:14:6.02:64,6,0	0/1:15,0:16:33.56:37,0,34	0/0:29,0:29:6.02:0,6,88	0/1:13,0:16:8.12:8,0,16	1/1:16,6:23:14.87:141,15,0	0/1:32,1:32:19.29:19,0,117	0/1:17,1:17:19.75:20,0,113	0/0:21,0:21:11.96:0,12,112	0/0:19,0:18:15.02:0,15,166	0/0:34,0:42:3:0,3,26	./.	./.	1/1:22,5:30:23.56:201,24,0	0/1:22,2:24:7.73:8,0,263	0/0:20,0:20:2.90:0,3,16	0/0:18,0:18:18.05:0,18,222	1/1:10,0:9:2.99:23,3,0
chr10	52458115	.	A	AG	902.90	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-5.965;DP=576;FS=3.761;HRun=2;HaplotypeScore=54.6058;InbreedingCoeff=0.9974;MQ=85.01;MQ0=0;MQRankSum=-1.032;QD=34.73;ReadPosRankSum=-3.753;VQSLOD=2.3456;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:72.21:0,72,877	0/0:8,0:8:24.08:0,24,296	0/0:17,0:17:47.51:0,48,552	0/0:21,0:21:52.11:0,52,627	0/0:26,0:26:78.25:0,78,965	0/0:24,0:24:69.18:0,69,817	0/0:16,0:16:45.14:0,45,557	1/1:2,24:26:72.21:998,72,0	0/0:16,0:16:45.14:0,45,557	0/0:23,0:23:66.20:0,66,809	0/0:20,0:20:60.19:0,60,742	0/0:21,0:21:60.16:0,60,718	0/0:16,0:16:48.12:0,48,578	0/0:32,0:32:96.29:0,96,1177	0/0:26,0:26:75.24:0,75,929	0/0:33,0:33:99:0,99,1226	0/0:24,0:24:66.19:0,66,794	0/0:15,0:15:42.13:0,42,520	0/0:20,0:20:54.13:0,54,642	0/0:17,0:17:51.15:0,51,619	0/0:26,0:26:75.19:0,75,890	0/0:17,0:17:48.14:0,48,582	0/0:16,0:16:45.04:0,45,524	0/0:17,0:17:48.15:0,48,594	0/0:19,0:19:57.18:0,57,706	0/0:19,0:19:54.16:0,54,659	0/0:26,0:25:75.23:0,75,917	0/0:10,0:10:30.09:0,30,371
chr10	52458232	.	T	TC	11514.36	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-13.450;DP=607;FS=1.371;HRun=3;HaplotypeScore=57.4037;InbreedingCoeff=0.9984;MQ=72.72;MQ0=0;MQRankSum=-3.680;QD=36.44;ReadPosRankSum=0.162;VQSLOD=5.2185;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,28:29:75.25:1050,75,0	1/1:1,7:8:18.06:252,18,0	0/0:20,0:20:57.17:0,57,683	0/0:26,0:26:68.88:0,69,791	0/0:15,0:15:42.13:0,42,504	0/0:17,0:17:45.14:0,45,540	0/0:28,0:28:78.24:0,78,936	1/1:2,24:26:72.22:988,72,0	0/0:20,0:20:48.13:0,48,565	0/0:28,0:28:81.25:0,81,971	0/0:10,0:10:30.09:0,30,360	1/1:1,21:22:57.19:798,57,0	1/1:0,20:20:48.16:672,48,0	0/0:25,0:25:75.23:0,75,900	1/1:2,29:31:84.28:1175,84,0	1/1:1,27:28:75.25:1049,75,0	0/0:32,0:32:96.29:0,96,1152	0/0:9,0:9:27.08:0,27,324	1/1:4,17:21:51.14:680,51,0	1/1:0,12:12:33.11:462,33,0	1/1:1,27:28:78.26:1092,78,0	1/1:1,15:16:30.10:420,30,0	1/1:3,9:12:27.09:378,27,0	1/1:1,27:28:78.26:1092,78,0	0/0:25,0:25:72.22:0,72,864	0/0:25,0:25:69.21:0,69,828	1/1:1,34:35:99:1405,102,0	0/0:11,0:11:33.10:0,33,396
chr10	52458390	.	AAG	A	851.37	PASS	AB=0.969;AC=27;AF=0.563;AN=48;BaseQRankSum=3.282;DP=581;FS=1.657;HRun=0;HaplotypeScore=87.3270;InbreedingCoeff=0.3499;MQ=62.72;MQ0=25;MQRankSum=1.248;QD=2.63;ReadPosRankSum=2.533;VQSLOD=1.5089;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:28:15.92:0,16,187	0/0:9,0:9:6.49:0,6,89	./.	./.	1/1:21,0:21:2.22:7,2,0	0/1:27,0:27:29.58:47,0,30	1/1:20,0:23:3.07:11,3,0	0/0:41,0:35:14.27:0,14,85	0/1:25,0:23:52.04:52,0,76	0/0:21,0:20:21.06:0,21,252	0/0:19,0:19:9.02:0,9,106	1/1:14,2:15:14.85:129,15,0	0/1:25,2:28:9.84:178,0,10	0/0:14,0:21:9.01:0,9,93	1/1:13,8:22:17.77:158,18,0	1/1:18,2:21:17.77:160,18,0	1/1:7,0:10:2.84:14,3,0	1/1:9,0:12:1.08:11,1,0	1/1:5,0:6:2.84:14,3,0	./.	0/0:11,0:11:2.50:0,2,9	0/1:21,0:21:51.83:52,0,63	1/1:11,2:13:6.01:61,6,0	1/1:16,8:21:3.01:32,3,0	0/1:15,0:15:2.22:2,0,65	0/0:22,0:22:9.57:0,10,108	1/1:19,0:30:17.04:84,17,0	./.
chr10	52461706	.	A	AT	1412.03	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-8.535;DP=655;FS=4.667;HRun=6;HaplotypeScore=65.3805;InbreedingCoeff=0.9985;MQ=77.51;MQ0=0;MQRankSum=-0.765;QD=30.04;ReadPosRankSum=-1.800;VQSLOD=3.7147;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:0,19:19:57.18:717,57,0	0/0:9,0:9:24.05:0,24,245	0/0:15,0:15:33.03:0,33,325	0/0:13,0:13:32.90:0,33,311	0/0:36,0:36:99:0,105,1070	0/0:37,0:37:99:0,108,1102	0/0:23,0:23:66.15:0,66,673	1/1:5,23:28:66.20:817,66,0	0/0:28,0:28:78.12:0,78,787	0/0:21,0:21:54.12:0,54,546	0/0:24,0:24:60.11:0,60,603	0/0:26,0:26:75.17:0,75,765	0/0:21,0:21:40.20:0,40,561	0/0:18,0:18:54.12:0,54,550	0/0:24,0:24:69.16:0,69,704	0/0:23,0:23:66.10:0,66,652	0/0:15,0:15:45.10:0,45,459	0/0:20,0:20:57.13:0,57,581	0/0:23,0:23:66.04:0,66,654	0/0:38,0:38:99:0,105,1064	0/0:12,0:12:36.08:0,36,367	0/0:22,0:22:63.12:0,63,629	0/0:24,0:24:72.14:0,72,722	0/0:25,0:25:63.14:0,63,643	0/0:26,0:26:68.88:0,69,679	0/0:27,0:27:75.16:0,75,755	0/0:42,0:41:99:0,117,1184	0/0:16,0:16:34.98:0,35,355
chr10	52462591	.	TAC	T	3012.19	PASS	AB=0.772;AC=25;AF=0.463;AN=54;BaseQRankSum=-0.689;DP=569;FS=0.000;HRun=0;HaplotypeScore=89.0116;InbreedingCoeff=0.4992;MQ=59.87;MQ0=5;MQRankSum=4.343;QD=9.62;ReadPosRankSum=1.387;VQSLOD=3.0435;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:21.07:0,21,307	0/0:10,0:13:9.01:0,9,94	./.	0/0:21,0:14:3.01:0,3,33	1/1:11,13:25:38.72:373,39,0	0/1:8,10:19:21.19:189,0,21	1/1:3,9:12:15.04:166,15,0	0/1:20,0:29:43.69:44,0,46	1/1:10,5:15:18:185,18,0	1/1:19,11:29:35.83:348,36,0	1/1:10,23:33:60.08:636,60,0	0/0:10,0:23:15:0,15,130	0/0:8,0:16:14.92:0,15,130	0/1:4,11:15:15.08:268,0,15	0/0:9,0:18:8.92:0,9,67	0/1:10,1:17:20.09:27,0,20	1/1:11,0:15:8.56:42,9,0	1/1:14,0:17:1.80:12,2,0	0/0:9,0:9:6.91:0,7,91	0/0:31,0:31:4.89:0,5,399	0/1:15,1:16:5.65:6,0,307	0/0:10,0:18:11.86:0,12,119	0/0:8,0:18:8.45:0,8,76	0/0:7,0:14:5.83:0,6,52	1/1:9,16:25:39.10:427,39,0	1/1:15,13:28:29.83:301,30,0	0/0:30,0:30:30.58:0,31,661	1/1:5,10:16:17.88:180,18,0
chr10	52463667	.	TA	T	10823.14	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=14.533;DP=690;FS=2.895;HRun=6;HaplotypeScore=68.8641;InbreedingCoeff=0.9992;MQ=87.46;MQ0=0;MQRankSum=-4.397;QD=27.97;ReadPosRankSum=2.228;VQSLOD=5.6899;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,37:37:99:1128,105,0	1/1:1,11:12:33.08:353,33,0	0/0:23,0:23:63.65:0,64,791	0/0:25,0:25:66.12:0,66,799	0/0:25,0:25:66.21:0,66,868	0/0:27,0:27:81.24:0,81,1036	0/0:31,0:31:87.27:0,87,1131	1/1:4,30:34:87.20:927,87,0	0/0:31,0:31:84.27:0,84,1105	0/0:37,0:37:99:0,99,1275	0/0:23,0:23:57.19:0,57,750	1/1:1,28:29:78.20:838,78,0	1/1:1,16:17:45.11:483,45,0	0/0:28,0:28:81.26:0,81,1066	1/1:1,24:25:72.18:774,72,0	1/1:5,32:37:93.23:1000,93,0	1/1:1,21:22:54.13:580,54,0	1/1:3,16:19:48.12:516,48,0	1/1:0,12:12:36.09:387,36,0	1/1:3,26:29:72.18:774,72,0	1/1:1,23:24:63.16:677,63,0	1/1:1,18:19:45.11:483,45,0	1/1:1,28:29:84.21:903,84,0	1/1:3,12:15:27.07:290,27,0	0/0:18,0:18:51.17:0,51,671	0/0:27,0:27:81.26:0,81,1054	1/1:3,24:27:66.17:709,66,0	0/0:8,0:8:21.07:0,21,276
chr10	52464134	.	A	ACTCT	20784.29	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=-14.426;DP=633;FS=0.673;HRun=0;HaplotypeScore=95.7571;InbreedingCoeff=0.9949;MQ=86.14;MQ0=2;MQRankSum=-7.854;QD=55.72;ReadPosRankSum=1.479;VQSLOD=5.9448;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,23:27:60.21:1548,60,0	1/1:2,11:13:33.11:837,33,0	0/0:25,0:25:24.59:0,25,606	0/0:25,0:25:35.23:0,35,736	0/0:26,0:26:78.24:0,78,1342	0/0:24,0:24:72.24:0,72,1276	0/0:23,0:23:57.19:0,57,1022	1/1:17,20:38:87.30:2104,87,0	0/0:18,0:18:45.13:0,45,787	0/0:24,0:24:63.22:0,63,1143	0/0:20,0:20:48.15:0,48,836	1/1:5,14:20:42.14:1093,42,0	1/1:2,19:21:54.19:1405,54,0	0/0:34,0:34:96.33:0,96,1728	1/1:3,26:30:69.24:1798,69,0	1/1:0,26:26:72.25:1877,72,0	1/1:5,21:26:51.18:1329,51,0	1/1:3,17:20:42.14:1096,42,0	1/1:7,16:23:57.18:1358,57,0	1/1:3,19:21:36.12:895,36,0	1/1:1,25:27:44.99:1173,45,0	1/1:1,13:15:24.02:617,24,0	1/1:2,12:15:26.78:703,27,0	1/1:1,22:23:57.20:1487,57,0	0/0:17,0:17:45.15:0,45,814	0/0:20,0:20:57.18:0,57,995	1/1:5,21:26:57.20:1464,57,0	0/0:4,0:4:12.04:0,12,209
chr10	52465698	.	GATTTCAAA	G	1850.10	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.589;DP=656;FS=1.688;HRun=0;HaplotypeScore=163.4115;InbreedingCoeff=0.9918;MQ=78.28;MQ0=0;MQRankSum=-6.253;QD=66.08;ReadPosRankSum=-2.370;VQSLOD=3.4977;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,105,4731	0/0:11,0:11:33.11:0,33,1495	0/0:23,0:23:66.23:0,66,2912	0/0:18,0:18:54.18:0,54,2103	0/0:22,0:22:63.22:0,63,2702	0/0:23,0:23:69.24:0,69,3127	0/0:33,0:33:99:0,99,4026	1/1:4,24:28:72.22:1945,72,0	0/0:16,0:16:48.15:0,48,1908	0/0:27,0:27:81.27:0,81,3480	0/0:22,0:22:66.23:0,66,2886	0/0:25,0:25:75.26:0,75,3331	0/0:25,0:25:72.25:0,72,3088	0/0:23,0:23:69.24:0,69,3120	0/0:28,0:28:84.29:0,84,3737	0/0:25,0:25:75.26:0,75,3302	0/0:29,0:29:87.30:0,87,3695	0/0:22,0:22:66.23:0,66,2840	0/0:21,0:21:60.21:0,60,2540	0/0:28,0:28:84.27:0,84,3525	0/0:26,0:26:78.27:0,78,3331	0/0:17,0:17:48.15:0,48,1996	0/0:14,0:14:42.14:0,42,1805	0/0:21,0:21:63.22:0,63,2679	0/0:24,0:24:72.24:0,72,2970	0/0:24,0:24:72.24:0,72,3073	0/0:39,0:39:99:0,117,5017	0/0:6,0:6:18.04:0,18,704
chr10	52467668	.	G	GTGCACACGCA	25312.94	PASS	AB=0.596;AC=31;AF=0.554;AN=56;BaseQRankSum=-8.096;DP=740;FS=2.305;HRun=0;HaplotypeScore=194.0690;InbreedingCoeff=0.9153;MQ=67.64;MQ0=1;MQRankSum=-16.321;QD=59.84;ReadPosRankSum=-2.839;VQSLOD=4.4457;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,0:27:18.06:675,18,0	1/1:1,16:17:24.08:1240,24,0	0/0:43,0:33:66.66:0,67,1771	0/0:32,0:27:56.69:0,57,1351	0/0:29,0:29:81.24:0,81,2340	0/0:33,0:33:87.28:0,87,2631	0/0:14,0:14:36.11:0,36,999	1/1:11,14:36:99:3222,99,0	0/0:23,0:23:66.21:0,66,2012	0/0:25,0:25:63.21:0,63,1875	0/0:16,0:16:45.14:0,45,1187	1/1:11,0:31:77.39:2242,77,0	1/1:6,0:32:80.56:2754,81,0	0/0:24,0:24:63.22:0,63,1950	1/1:7,21:30:32.82:1646,33,0	0/1:9,18:28:99:1664,0,173	1/1:6,14:23:24.08:1138,24,0	1/1:4,8:14:21.07:952,21,0	1/1:7,10:20:54.04:1462,54,0	1/1:11,27:42:42.10:1945,42,0	1/1:5,9:20:9.03:465,9,0	1/1:9,0:37:74.57:2109,75,0	1/1:3,0:20:41.86:1324,42,0	1/1:6,0:17:14.92:445,15,0	0/0:26,0:26:78.27:0,78,2440	0/0:34,0:34:93.30:0,93,2715	1/1:10,16:29:42.14:2028,42,0	0/0:18,0:18:54.19:0,54,1608
chr10	52467904	.	AT	A	6156.74	PASS	AB=0.568;AC=29;AF=0.518;AN=56;BaseQRankSum=14.694;DP=712;FS=0.940;HRun=10;HaplotypeScore=81.4686;InbreedingCoeff=0.9163;MQ=74.33;MQ0=2;MQRankSum=-1.394;QD=16.59;ReadPosRankSum=1.916;VQSLOD=5.4395;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:90.20:0,90,982	1/1:0,11:11:26.97:234,27,0	0/0:16,0:16:18.75:0,19,248	0/0:13,0:13:17.78:0,18,173	0/0:34,0:34:87.20:0,87,942	0/0:37,0:37:90.24:0,90,996	0/0:31,0:31:81.20:0,81,887	1/1:7,28:35:83.91:718,84,0	0/0:21,0:21:57.13:0,57,616	0/0:31,0:31:84.23:0,84,929	0/0:21,0:21:63.17:0,63,697	1/1:2,25:27:68.96:599,69,0	1/1:3,20:23:50.52:442,51,0	0/0:29,2:31:55.14:0,55,823	1/1:2,29:31:83.98:729,84,0	0/1:6,19:25:15.37:340,0,15	1/1:3,31:35:92.02:787,92,0	1/1:1,17:18:47.99:417,48,0	1/1:2,0:21:37.13:108,37,0	1/1:0,0:27:48.88:144,49,0	1/1:1,0:28:48.89:144,49,0	1/1:0,14:15:32:266,32,0	1/1:4,18:22:50.98:443,51,0	1/1:0,27:27:77.98:677,78,0	0/0:30,0:30:81.18:0,81,883	0/0:30,0:30:72.18:0,72,788	1/1:4,0:24:36.66:108,37,0	0/0:10,1:11:7.04:0,7,306
chr10	52468883	.	G	GT	539.88	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-3.614;DP=337;FS=1.912;HRun=0;HaplotypeScore=46.1199;InbreedingCoeff=0.8577;MQ=76.70;MQ0=0;MQRankSum=0.391;QD=29.99;ReadPosRankSum=-1.960;VQSLOD=3.0291;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:48.14:0,48,651	0/0:2,0:2:6.02:0,6,84	0/0:25,0:24:63.34:0,63,626	0/0:16,0:13:29.83:0,30,302	0/0:15,0:15:42.09:0,42,512	0/0:11,0:11:30.08:0,30,385	0/0:17,0:17:48.16:0,48,669	1/1:3,15:18:48.12:635,48,0	0/0:11,0:11:33.11:0,33,460	0/0:8,0:8:21.05:0,21,262	0/0:8,0:8:24.07:0,24,318	0/0:13,0:13:39.07:0,39,464	0/0:13,0:13:28.79:0,29,402	0/0:12,0:12:36.07:0,36,449	0/0:13,0:13:33.20:0,33,420	0/0:10,0:10:30.08:0,30,387	0/0:13,0:13:36.09:0,36,453	0/0:12,0:12:33.05:0,33,389	0/0:7,0:7:20.27:0,20,243	0/0:6,0:6:15.05:0,15,209	0/0:18,0:18:51.10:0,51,613	0/0:10,0:10:27.04:0,27,336	0/0:7,0:7:18.04:0,18,232	0/0:8,0:8:21.07:0,21,292	0/0:17,0:17:48.13:0,48,620	0/0:9,0:9:27.07:0,27,347	0/0:13,0:13:36.07:0,36,435	0/0:8,0:8:14.98:0,15,154
chr10	52474382	.	T	TTTTGG	7873.23	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-0.318;DP=822;FS=2.271;HRun=0;HaplotypeScore=149.0028;InbreedingCoeff=0.9859;MQ=64.61;MQ0=6;MQRankSum=-5.284;QD=30.28;ReadPosRankSum=1.593;VQSLOD=4.8088;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:58:99:0,114,1876	0/0:13,0:13:24.07:0,24,413	0/0:41,0:32:11.09:0,11,115	0/0:46,0:29:14.63:0,15,186	0/0:28,0:27:48.06:0,48,643	0/0:13,0:13:27.06:0,27,420	0/0:29,0:29:54.15:0,54,881	0/0:38,0:37:27.02:0,27,248	0/0:36,0:36:56.95:0,57,857	0/0:31,0:31:75.14:0,75,1125	0/0:19,0:19:39.12:0,39,674	1/1:7,23:32:27.09:767,27,0	1/1:9,19:27:30.10:850,30,0	0/0:30,0:30:69.18:0,69,1159	0/0:24,0:24:27.08:0,27,468	0/0:23,0:23:42.11:0,42,677	0/0:36,0:36:84.13:0,84,1221	0/0:35,0:35:63.11:0,63,956	1/1:25,0:25:35.91:660,36,0	1/1:30,0:29:50.91:824,51,0	1/1:15,0:15:17.94:209,18,0	1/1:11,8:21:23.89:433,24,0	1/1:10,17:28:28.28:697,28,0	1/1:9,32:41:56.95:1553,57,0	0/0:19,0:19:30.03:0,30,350	0/0:35,0:35:59.89:0,60,874	1/1:39,0:37:90.09:1881,90,0	0/0:7,0:7:14.79:0,15,233
chr10	52474410	.	T	TG	666.15	PASS	AB=0.898;AC=9;AF=0.161;AN=56;BaseQRankSum=13.051;DP=788;FS=0.402;HRun=1;HaplotypeScore=110.0153;InbreedingCoeff=-0.1877;MQ=73.13;MQ0=4;MQRankSum=-4.598;QD=2.69;ReadPosRankSum=1.313;VQSLOD=-0.4095;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:59,0:59:99:0,168,2121	0/0:11,0:11:30.09:0,30,377	0/0:37,0:32:81.07:0,81,930	0/0:35,1:29:76.34:0,76,910	0/0:22,0:22:66.20:0,66,831	0/0:21,0:21:48.14:0,48,608	0/0:27,0:27:81.25:0,81,1035	0/0:23,0:24:62.41:0,62,741	0/0:27,0:27:72.21:0,72,909	0/0:35,0:35:99:0,102,1288	0/0:23,0:23:69.20:0,69,867	0/1:33,0:33:11.33:11,0,242	0/1:29,0:28:21.68:22,0,178	0/0:32,0:32:90.27:0,90,1139	0/0:29,0:29:75.18:0,75,951	0/0:23,0:23:60.18:0,60,764	0/0:41,0:41:99:0,123,1549	0/0:31,0:31:90.25:0,90,1147	0/1:12,6:18:85.60:86,0,364	0/1:19,8:27:99:122,0,473	0/1:17,2:19:78.82:79,0,410	0/1:20,0:20:10.75:11,0,436	0/1:24,0:24:79.16:79,0,299	0/1:40,0:39:64.11:64,0,229	0/0:20,0:20:57.15:0,57,697	0/0:33,0:32:93.22:0,93,1161	0/1:18,20:36:99:332,0,457	0/0:9,0:9:27.09:0,27,350
chr10	52474415	.	G	GTTTA	2308.71	PASS	AB=0.915;AC=9;AF=0.161;AN=56;BaseQRankSum=13.975;DP=768;FS=0.000;HRun=0;HaplotypeScore=144.4247;InbreedingCoeff=-0.1915;MQ=73.72;MQ0=3;MQRankSum=-2.865;QD=9.66;ReadPosRankSum=-0.069;VQSLOD=3.0612;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:58:99:0,168,3276	0/0:9,0:9:27.09:0,27,563	0/0:35,0:31:75.95:0,76,1333	0/0:34,0:28:74.85:0,75,1148	0/0:23,0:23:69.17:0,69,1273	0/0:22,0:22:57.12:0,57,982	0/0:29,0:29:78.25:0,78,1585	0/0:24,0:24:66.17:0,66,1156	0/0:26,0:26:68.87:0,69,1401	0/0:35,0:35:99:0,102,2083	0/0:23,0:23:69.15:0,69,1334	0/1:29,0:29:92.35:92,0,374	0/1:31,0:30:99:123,0,314	0/0:31,0:31:87.26:0,87,1687	0/0:28,0:28:75.21:0,75,1445	0/0:22,0:22:63.19:0,63,1214	0/0:39,0:39:99:0,117,2347	0/0:29,0:29:84.24:0,84,1674	0/1:12,5:17:70.83:387,0,71	0/1:18,6:24:55.27:406,0,55	0/1:21,1:22:99:138,0,131	0/1:18,0:18:25.75:26,0,655	0/1:25,0:25:99:142,0,502	0/1:37,0:36:99:209,0,336	0/0:21,0:21:63.11:0,63,1104	0/0:31,0:31:93.30:0,93,1841	0/1:21,13:34:50.17:927,0,50	0/0:10,0:10:30.08:0,30,582
chr10	52475158	.	T	TA	1190.93	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.144;DP=602;FS=4.875;HRun=0;HaplotypeScore=87.4609;InbreedingCoeff=0.9788;MQ=58.80;MQ0=13;MQRankSum=-2.185;QD=36.09;ReadPosRankSum=-3.662;VQSLOD=2.1176;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:81.15:0,81,1081	0/0:10,0:10:30.06:0,30,393	0/0:43,0:21:57.63:0,58,778	0/0:32,0:19:51.02:0,51,653	0/0:24,0:24:57.18:0,57,770	0/0:14,0:14:42.14:0,42,587	0/0:22,0:21:55.69:0,56,794	1/1:5,28:33:87.21:1286,87,0	0/0:19,0:19:57.19:0,57,795	0/0:21,0:20:63.21:0,63,876	0/0:8,0:8:21.06:0,21,278	0/0:19,0:19:54.18:0,54,754	0/0:25,0:25:63.15:0,63,833	0/0:17,0:17:48.16:0,48,669	0/0:30,0:30:90.29:0,90,1243	0/0:21,0:21:54.18:0,54,755	0/0:18,0:18:54.11:0,54,731	0/0:24,0:23:63.21:0,63,880	0/0:15,0:14:39.13:0,39,546	0/0:9,0:9:27.05:0,27,351	0/0:42,0:39:99:0,100,1317	0/0:12,0:12:36.08:0,36,481	0/0:21,0:21:60.15:0,60,807	0/0:24,0:24:50.38:0,50,674	0/0:28,0:28:78.25:0,78,1070	0/0:20,0:20:60.19:0,60,824	0/0:16,0:16:39.60:0,40,547	0/0:6,0:6:15.05:0,15,208
chr10	52475165	.	GGTGTGT	G	826.54	PASS	AB=0.816;AC=13;AF=0.241;AN=54;BaseQRankSum=6.597;DP=655;FS=8.248;HRun=0;HaplotypeScore=144.5226;InbreedingCoeff=0.5234;MQ=57.30;MQ0=8;MQRankSum=-2.996;QD=4.20;ReadPosRankSum=2.334;VQSLOD=2.0810;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:29,1:30:6.01:88,6,0	0/0:5,0:8:2.11:0,2,20	0/0:35,0:21:0.89:0,1,2	./.	0/0:21,0:22:21.07:0,21,570	0/0:19,0:18:33.06:0,33,867	0/0:26,0:24:12.04:0,12,316	0/0:34,0:34:3.01:0,3,57	0/0:22,0:22:18.06:0,18,517	0/0:25,0:24:21.06:0,21,407	0/0:10,0:9:12.02:0,12,258	1/1:18,2:23:17.95:234,18,0	0/1:17,13:30:2.03:284,0,2	0/0:17,0:17:15.05:0,15,409	0/1:27,0:30:15.54:16,0,94	1/1:12,2:22:8.62:107,9,0	0/0:18,0:18:18.02:0,18,406	0/0:21,0:23:17:0,17,148	0/0:19,0:18:9.01:0,9,95	0/0:11,0:11:12.03:0,12,179	0/0:57,0:52:23.99:0,24,388	0/1:13,3:16:54.63:55,0,62	1/1:16,1:19:7.57:140,8,0	1/1:24,3:26:2.98:61,3,0	0/0:27,0:27:24.01:0,24,394	0/0:26,0:26:28.65:0,29,740	0/0:17,0:21:12.83:0,13,138	0/0:7,0:7:6.02:0,6,193
chr10	52475242	.	A	ATGTG	2548.87	PASS	AB=0.894;AC=37;AF=0.712;AN=52;BaseQRankSum=2.122;DP=559;FS=25.123;HRun=0;HaplotypeScore=138.5306;InbreedingCoeff=0.4032;MQ=53.06;MQ0=13;MQRankSum=2.451;QD=5.83;ReadPosRankSum=-4.158;VQSLOD=-0.1564;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:28:14.85:168,15,0	1/1:9,0:9:20.84:181,21,0	0/0:25,0:14:3:0,3,28	./.	0/0:14,0:14:14.85:0,15,203	0/1:18,0:21:0.46:0,0,118	0/0:26,0:27:32.08:0,32,390	1/1:26,0:24:11.86:89,12,0	0/1:16,0:16:3.30:3,0,148	0/1:18,0:18:11.25:11,0,105	0/1:13,0:14:5.46:5,0,238	1/1:15,0:15:12.02:168,12,0	1/1:16,0:15:6.02:97,6,0	0/1:23,0:22:3.87:4,0,228	1/1:26,0:25:35.93:413,36,0	1/1:15,0:15:17.98:190,18,0	0/1:11,2:19:6.35:46,0,6	1/1:14,0:13:11.92:108,12,0	1/1:22,0:22:21.60:197,22,0	./.	1/1:50,0:46:12.91:109,13,0	1/1:13,0:13:5.99:70,6,0	1/1:16,0:16:11.98:114,12,0	1/1:30,0:30:23.62:301,24,0	0/0:11,0:12:14.25:0,14,172	0/1:10,7:19:34.67:249,0,35	1/1:17,0:17:8.97:71,9,0	1/1:9,0:8:11.97:121,12,0
chr10	52476316	.	TA	T	538.77	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.199;DP=514;FS=15.534;HRun=1;HaplotypeScore=100.2368;InbreedingCoeff=0.7504;MQ=63.83;MQ0=2;MQRankSum=-4.022;QD=19.95;ReadPosRankSum=-3.691;VQSLOD=1.9580;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,99,1439	0/0:8,0:8:15.05:0,15,239	0/0:20,0:12:36.07:0,36,547	0/0:24,0:19:49.87:0,50,763	0/0:18,0:18:54.18:0,54,861	0/0:16,0:16:48.16:0,48,765	0/0:20,0:20:59.57:0,60,918	1/1:4,23:23:2.42:616,2,0	0/0:15,0:15:45.15:0,45,710	0/0:19,0:19:57.18:0,57,888	0/0:7,0:7:21.07:0,21,335	0/0:22,0:22:66.20:0,66,1000	0/0:24,0:24:72.25:0,72,1143	0/0:23,0:23:66.22:0,66,1049	0/0:17,0:17:36.12:0,36,564	0/0:13,0:13:33.11:0,33,523	0/0:25,0:25:68.72:0,69,1046	0/0:24,0:24:63.21:0,63,988	0/0:15,0:15:43.01:0,43,648	0/0:13,0:13:36.11:0,36,542	0/0:18,0:18:42.14:0,42,666	0/0:14,0:14:42.14:0,42,657	0/0:17,0:17:48.15:0,48,729	0/0:13,0:13:33.08:0,33,493	0/0:18,0:18:54.18:0,54,860	0/0:11,0:11:33.11:0,33,526	0/0:26,0:26:66.22:0,66,1023	0/0:9,0:9:27.09:0,27,431
chr10	52476328	.	TTTCC	T	2506.53	PASS	AB=0.996;AC=23;AF=0.411;AN=56;BaseQRankSum=2.913;DP=491;FS=4.520;HRun=0;HaplotypeScore=116.4498;InbreedingCoeff=0.3048;MQ=60.89;MQ0=4;MQRankSum=0.237;QD=8.79;ReadPosRankSum=-0.389;VQSLOD=2.3644;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:30:36.03:36,0,784	0/1:8,0:8:25.23:40,0,25	0/0:26,0:12:29.22:0,29,426	0/0:25,0:19:38.81:0,39,580	0/0:19,0:19:57.16:0,57,1328	0/0:14,0:14:42.10:0,42,935	0/0:23,0:23:51.74:0,52,1436	1/1:15,0:11:20.49:131,20,0	0/0:12,0:12:36.10:0,36,815	0/0:16,0:16:48.11:0,48,895	0/0:7,0:7:21.06:0,21,480	1/1:23,0:23:16.67:202,17,0	0/1:23,1:24:14.27:296,0,14	0/0:25,0:25:72.20:0,72,1552	0/1:17,0:17:73.34:128,0,73	0/1:12,0:12:62.80:101,0,63	1/1:25,1:26:15.41:407,15,0	1/1:24,1:25:4.15:347,4,0	0/1:15,0:14:99:146,0,108	0/1:12,0:12:46.98:71,0,47	0/1:15,0:15:25.98:26,0,161	1/1:8,1:9:13.07:168,13,0	1/1:13,0:13:16.78:258,17,0	1/1:15,1:16:24.50:303,24,0	0/0:13,0:13:39.12:0,39,920	0/0:17,0:17:51.15:0,51,1079	0/1:25,0:25:43:43,0,393	0/0:9,0:9:27.09:0,27,641
chr10	52476349	.	C	CTCTG	5470.30	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=9.080;DP=528;FS=0.000;HRun=0;HaplotypeScore=119.7627;InbreedingCoeff=0.9341;MQ=57.80;MQ0=8;MQRankSum=0.650;QD=19.89;ReadPosRankSum=1.750;VQSLOD=4.6076;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:75.15:0,75,1179	1/1:0,0:7:3.01:61,3,0	0/0:27,0:9:13.92:0,14,196	0/0:25,0:18:20.84:0,21,317	0/0:17,0:17:33.07:0,33,481	0/0:12,0:12:36.11:0,36,561	0/0:23,0:23:57.19:0,57,920	0/0:14,0:12:18.99:0,19,173	0/0:16,0:16:36.11:0,36,546	0/0:13,0:13:27.09:0,27,439	0/0:6,0:6:15.05:0,15,232	1/1:29,0:29:75.96:684,76,0	1/1:28,0:28:52.35:642,52,0	0/0:19,0:19:51.16:0,51,814	1/1:1,1:19:8.90:181,9,0	1/1:1,0:12:6.02:121,6,0	1/1:29,0:29:59.47:727,59,0	1/1:25,0:25:55.83:535,56,0	1/1:8,6:11:18.06:351,18,0	1/1:2,8:10:15.05:326,15,0	1/1:3,17:20:9.03:221,9,0	1/1:11,0:11:22.59:210,23,0	1/1:18,0:18:44.42:336,44,0	1/1:22,0:22:46.53:563,47,0	0/0:16,0:16:45.13:0,45,687	0/0:19,0:19:48.16:0,48,779	1/1:8,23:31:19.54:512,20,0	0/0:8,0:8:21.07:0,21,342
chr10	52476367	.	CTGTA	C	500.55	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=1.896;DP=555;FS=0.852;HRun=0;HaplotypeScore=130.4594;InbreedingCoeff=0.8775;MQ=66.15;MQ0=5;MQRankSum=-3.479;QD=27.81;ReadPosRankSum=-3.884;VQSLOD=2.6288;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:87.23:0,87,2019	0/0:5,0:5:6.01:0,6,87	0/0:29,0:21:47.72:0,48,809	0/0:25,0:22:56.93:0,57,916	0/0:17,0:17:50.77:0,51,828	0/0:13,0:13:39.09:0,39,872	0/0:28,0:28:84.14:0,84,1635	1/1:11,7:17:46.28:595,46,0	0/0:17,0:17:48.08:0,48,956	0/0:11,0:11:30.09:0,30,678	0/0:7,0:7:18.05:0,18,390	0/0:30,0:30:90.27:0,90,2167	0/0:29,0:29:73.17:0,73,1793	0/0:18,0:18:54.16:0,54,1341	0/0:20,0:20:21.03:0,21,346	0/0:14,0:14:15.04:0,15,281	0/0:34,0:34:93.71:0,94,2089	0/0:24,0:24:64.61:0,65,1435	0/0:12,0:10:27.03:0,27,368	0/0:13,0:13:32.06:0,32,415	0/0:20,0:20:21.02:0,21,269	0/0:13,0:13:39.07:0,39,792	0/0:22,0:22:50.60:0,51,1107	0/0:26,0:26:55.14:0,55,1244	0/0:17,0:17:51.13:0,51,1169	0/0:20,0:20:57.18:0,57,1367	0/0:27,0:27:44.90:0,45,624	0/0:11,0:11:33.11:0,33,811
chr10	52477179	.	TGCCCA	T	10663.21	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=11.834;DP=591;FS=5.608;HRun=0;HaplotypeScore=128.7841;InbreedingCoeff=0.9942;MQ=95.32;MQ0=2;MQRankSum=-2.844;QD=38.08;ReadPosRankSum=6.028;VQSLOD=4.4760;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,26:30:66.23:1206,66,0	1/1:2,9:11:21.07:402,21,0	0/0:34,0:32:48.35:0,48,968	0/0:51,0:47:42.59:0,43,1158	0/0:13,0:13:33.10:0,33,896	0/0:26,0:26:69.24:0,69,1946	0/0:31,0:31:72.25:0,72,2098	0/0:21,0:21:39.11:0,39,985	0/0:21,0:21:51.17:0,51,1395	0/0:15,0:15:30.10:0,30,842	0/0:11,0:11:27.09:0,27,738	1/1:3,10:13:27.09:500,27,0	1/1:4,14:18:45.15:857,45,0	0/0:30,0:30:78.26:0,78,2200	1/1:1,18:19:45.15:842,45,0	1/1:6,10:16:24.08:459,24,0	1/1:3,19:22:48.16:918,48,0	1/1:3,6:9:12.04:229,12,0	1/1:3,10:13:30.07:500,30,0	1/1:7,19:26:54.18:1027,54,0	1/1:7,29:36:66.23:1245,66,0	1/1:5,13:18:36.12:677,36,0	1/1:2,10:12:27.09:483,27,0	1/1:2,16:18:29.94:574,30,0	0/0:22,0:22:60.21:0,60,1639	0/0:17,0:17:39.13:0,39,1136	1/1:6,13:19:39.13:746,39,0	0/0:14,0:14:36.12:0,36,1015
chr10	52477447	.	AT	A	1343.36	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=7.505;DP=665;FS=12.033;HRun=10;HaplotypeScore=93.5861;InbreedingCoeff=0.7809;MQ=77.04;MQ0=0;MQRankSum=0.646;QD=15.44;ReadPosRankSum=-3.258;VQSLOD=2.0377;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,38:43:60.27:865,60,0	0/0:13,0:13:36.10:0,36,398	0/1:14,0:14:0.98:1,0,183	0/0:17,1:18:1.30:0,1,172	0/0:26,0:26:78.20:0,78,852	0/0:28,0:28:75.19:0,75,823	0/0:24,0:24:60.16:0,60,664	1/1:6,24:30:68.97:599,69,0	0/0:12,0:12:30.07:0,30,323	0/0:31,0:31:84.21:0,84,915	0/0:17,0:17:45.58:0,46,489	0/0:22,0:22:63.17:0,63,697	0/0:21,2:23:40.12:0,40,670	0/0:17,0:17:48.12:0,48,524	0/0:30,0:30:81.22:0,81,896	0/0:30,0:31:81.03:0,81,865	0/0:25,1:26:49.16:0,49,770	0/0:15,0:15:36.08:0,36,389	0/0:23,0:23:63.17:0,63,697	0/0:29,0:29:81.22:0,81,896	0/0:21,0:22:53.98:0,54,578	0/0:26,0:27:63:0,63,678	0/0:24,0:24:63.16:0,63,690	0/0:18,1:19:22.07:0,22,472	0/0:23,0:24:67.40:0,67,716	0/0:30,1:32:58.16:0,58,863	0/0:37,0:37:83.38:0,83,1106	0/0:8,0:8:21.06:0,21,231
chr10	52479106	.	GCA	G	1203.39	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.792;DP=810;FS=7.353;HRun=0;HaplotypeScore=96.8512;InbreedingCoeff=0.9918;MQ=83.52;MQ0=0;MQRankSum=-3.256;QD=36.47;ReadPosRankSum=-3.010;VQSLOD=4.9439;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,120,2218	0/0:11,0:11:33.11:0,33,617	0/0:36,0:36:99:0,102,1682	0/0:29,0:29:87.23:0,87,1482	0/0:24,0:24:68.76:0,69,1284	0/0:19,0:19:51.17:0,51,955	0/0:25,0:25:72.25:0,72,1332	1/1:3,30:33:90.28:1298,90,0	0/0:25,0:25:75.22:0,75,1313	0/0:44,0:44:99:0,126,2288	0/0:18,0:18:51.17:0,51,955	0/0:29,0:29:84.27:0,84,1541	0/0:38,0:38:99:0,114,2069	0/0:26,0:26:72.25:0,72,1331	0/0:48,0:48:99:0,135,2502	0/0:33,0:33:96.31:0,96,1754	0/0:32,0:32:96.33:0,96,1797	0/0:18,0:18:54.13:0,54,943	0/0:27,0:27:81.28:0,81,1495	0/0:22,0:22:66.23:0,66,1220	0/0:55,0:54:99:0,160,2879	0/0:25,0:25:69.21:0,69,1259	0/0:18,0:18:51.17:0,51,954	0/0:37,0:37:99:0,111,2033	0/0:26,0:26:75.24:0,75,1358	0/0:38,0:38:99:0,105,1908	0/0:25,0:25:75.19:0,75,1263	0/0:6,0:6:18.06:0,18,305
chr10	52481446	.	GCT	G	1135.84	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.322;DP=647;FS=10.914;HRun=0;HaplotypeScore=76.5481;InbreedingCoeff=0.9922;MQ=67.71;MQ0=0;MQRankSum=0.975;QD=39.17;ReadPosRankSum=-4.168;VQSLOD=3.7175;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:55:99:0,163,3011	0/0:11,0:11:33.11:0,33,603	0/0:14,0:14:25.51:0,26,512	0/0:8,0:9:23.86:0,24,344	0/0:37,0:37:99:0,111,2005	0/0:22,0:22:66.23:0,66,1236	0/0:18,0:18:54.18:0,54,995	1/1:1,28:29:84.28:1231,84,0	0/0:25,0:25:75.26:0,75,1395	0/0:24,0:24:69.24:0,69,1293	0/0:18,0:18:54.19:0,54,1011	0/0:24,0:24:72.25:0,72,1340	0/0:23,0:23:66.23:0,66,1226	0/0:24,0:24:69.24:0,69,1277	0/0:28,0:28:84.29:0,84,1553	0/0:29,0:29:87.28:0,87,1591	0/0:18,0:18:54.19:0,54,1003	0/0:17,0:17:45.15:0,45,842	0/0:21,0:21:57.20:0,57,1057	0/0:25,0:25:72.23:0,72,1316	0/0:27,0:27:81.28:0,81,1484	0/0:21,0:21:63.22:0,63,1163	0/0:24,0:24:69.24:0,69,1268	0/0:20,0:20:51.17:0,51,955	0/0:21,0:21:63.22:0,63,1180	0/0:27,0:27:81.28:0,81,1514	0/0:28,0:28:81.28:0,81,1516	0/0:7,0:7:21.07:0,21,393
chr10	52482289	.	A	ATT	3210.03	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-5.975;DP=600;FS=3.709;HRun=9;HaplotypeScore=70.1327;InbreedingCoeff=0.9988;MQ=72.78;MQ0=0;MQRankSum=-1.687;QD=26.75;ReadPosRankSum=0.137;VQSLOD=3.5682;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,0:24:47.29:162,47,0	0/0:10,0:10:30.06:0,30,311	0/0:13,0:14:34.85:0,35,329	0/0:9,0:9:23.41:0,23,231	0/0:41,0:41:99:0,99,1028	0/0:23,0:23:66.14:0,66,695	0/0:17,0:17:48.12:0,48,511	0/0:29,0:29:66.07:0,66,695	0/0:20,0:20:60.12:0,60,622	0/0:23,0:23:69.17:0,69,734	0/0:23,0:23:69.14:0,69,719	0/0:18,0:18:26.54:0,27,428	0/0:25,0:25:66.13:0,66,702	0/0:23,0:23:60.06:0,60,625	0/0:18,0:18:51.11:0,51,542	0/0:16,0:16:39.07:0,39,415	0/0:19,0:19:54.11:0,54,565	0/0:16,0:16:42.10:0,42,447	1/1:4,12:17:38.62:550,39,0	1/1:5,26:33:77.72:1137,78,0	1/1:5,17:23:55.03:797,55,0	0/0:20,0:20:54.10:0,54,559	0/0:25,0:25:69.13:0,69,717	0/0:19,0:19:54.12:0,54,571	0/0:25,0:25:69.16:0,69,734	0/0:35,0:35:81.55:0,82,939	1/1:2,21:23:48.05:739,48,0	0/0:12,0:12:30.01:0,30,296
chr10	52483865	.	GTT	G	4312.98	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=0.762;DP=695;FS=10.664;HRun=13;HaplotypeScore=102.8661;InbreedingCoeff=0.9399;MQ=67.18;MQ0=1;MQRankSum=0.501;QD=16.98;ReadPosRankSum=8.262;VQSLOD=2.4462;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:34:97.85:0,98,1153	1/1:3,13:18:23.84:332,24,0	0/0:16,0:14:19.33:0,19,194	0/1:12,0:9:1.46:1,0,134	0/0:31,0:31:68.96:0,69,874	0/0:16,0:20:49.57:0,50,583	0/0:17,0:20:47.11:0,47,592	0/0:12,0:37:86.12:0,86,724	0/0:20,0:22:50.96:0,51,529	0/0:24,0:27:61.79:0,62,705	0/0:25,0:28:65.68:0,66,830	1/1:4,25:30:53.57:505,54,0	1/1:9,32:42:39.14:654,39,0	0/0:19,0:21:53.08:0,53,594	1/1:7,31:38:74.99:777,75,0	1/1:8,18:28:54.80:538,55,0	0/0:16,0:20:54.99:0,55,615	0/0:19,0:20:39.83:0,40,418	0/0:13,0:18:37.13:0,37,315	0/0:7,0:24:49.76:0,50,373	0/0:7,0:18:27.92:0,28,256	1/1:8,28:36:71.47:678,71,0	1/1:5,19:28:11.34:350,11,0	1/1:2,19:22:38.86:478,39,0	0/0:17,0:18:41.86:0,42,462	0/0:23,0:24:49.66:0,50,590	0/0:22,0:36:89.47:0,89,773	0/0:5,0:5:15.05:0,15,212
chr10	52485708	.	A	AT	879.76	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-7.499;DP=751;FS=0.000;HRun=2;HaplotypeScore=70.0621;InbreedingCoeff=0.9996;MQ=82.21;MQ0=0;MQRankSum=-2.200;QD=35.19;ReadPosRankSum=-2.800;VQSLOD=2.8172;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,141,1733	0/0:12,0:12:33.10:0,33,409	0/0:27,0:27:72.20:0,72,862	0/0:24,0:24:51.12:0,51,589	0/0:34,0:34:90.27:0,90,1102	0/0:17,0:17:48.15:0,48,594	0/0:19,0:19:54.15:0,54,656	1/1:2,23:25:69.22:975,69,0	0/0:24,0:24:69.22:0,69,855	0/0:36,0:35:99:0,108,1339	0/0:25,0:25:72.21:0,72,880	0/0:28,0:28:78.23:0,78,954	0/0:28,0:28:75.23:0,75,930	0/0:27,0:27:72.23:0,72,892	0/0:36,0:36:99:0,102,1238	0/0:36,0:36:99:0,102,1251	0/0:19,0:19:51.13:0,51,617	0/0:22,0:22:66.17:0,66,801	0/0:23,0:23:54.15:0,54,647	0/0:41,0:41:99:0,120,1488	0/0:40,0:40:99:0,111,1362	0/0:18,0:18:51.16:0,51,632	0/0:17,0:17:45.13:0,45,545	0/0:23,0:23:69.16:0,69,825	0/0:25,0:25:69.22:0,69,854	0/0:28,0:28:78.23:0,78,956	0/0:35,0:35:99:0,102,1250	0/0:13,0:13:39.12:0,39,484
chr10	52486561	.	T	TA	2973.15	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=12.395;DP=744;FS=15.467;HRun=0;HaplotypeScore=89.1913;InbreedingCoeff=0.9998;MQ=81.94;MQ0=0;MQRankSum=-5.524;QD=28.87;ReadPosRankSum=-1.173;VQSLOD=2.2837;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,147,2008	1/1:10,2:12:35.82:364,36,0	0/0:29,0:29:81.11:0,81,1063	0/0:19,0:19:56.96:0,57,710	0/0:30,0:30:84.16:0,84,1080	0/0:15,0:15:45.15:0,45,629	0/0:30,0:30:87.25:0,87,1178	1/1:12,14:26:68.94:748,69,0	0/0:27,0:27:81.27:0,81,1132	0/0:23,0:23:66.21:0,66,904	0/0:15,0:15:39.13:0,39,545	0/0:30,0:30:90.13:0,90,1230	0/0:27,0:27:81.27:0,81,1131	0/0:41,0:41:99:0,120,1660	1/1:24,4:28:83.61:911,84,0	1/1:26,11:37:99:1110,106,0	0/0:27,0:27:81.23:0,81,1093	0/0:38,0:38:99:0,111,1552	0/0:20,0:20:60.17:0,60,803	0/0:21,0:21:60.20:0,60,838	0/0:55,0:55:99:0,165,2226	0/0:18,0:18:51.17:0,51,708	0/0:19,0:19:51.15:0,51,692	0/0:29,0:29:84.26:0,84,1149	0/0:15,0:15:42.14:0,42,585	0/0:26,0:26:75.24:0,75,1032	0/0:27,0:27:81.26:0,81,1115	0/0:10,0:10:30.10:0,30,419
chr10	52486565	.	AT	A	1980.17	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=13.858;DP=757;FS=12.580;HRun=2;HaplotypeScore=93.7818;InbreedingCoeff=0.9998;MQ=81.80;MQ0=0;MQRankSum=-4.339;QD=19.61;ReadPosRankSum=-0.319;VQSLOD=2.4288;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,150,2132	1/1:11,2:13:34.09:268,34,0	0/0:32,0:32:86.59:0,87,1144	0/0:20,0:20:48.16:0,48,693	0/0:29,0:29:78.17:0,78,1119	0/0:15,0:15:42.14:0,42,627	0/0:30,0:30:90.29:0,90,1313	1/1:12,14:26:67.01:534,67,0	0/0:27,0:27:81.26:0,81,1191	0/0:23,0:23:57.19:0,57,853	0/0:16,0:16:42.04:0,42,581	0/0:33,0:33:99:0,99,1464	0/0:29,0:29:87.28:0,87,1267	0/0:41,0:41:99:0,123,1819	1/1:23,4:27:73.65:632,74,0	1/1:24,11:35:86.01:707,86,0	0/0:25,0:25:75.25:0,75,1120	0/0:39,0:39:99:0,114,1658	0/0:21,0:21:63.20:0,63,925	0/0:22,0:22:66.14:0,66,959	0/0:58,0:58:99:0,168,2431	0/0:18,0:18:51.09:0,51,736	0/0:19,0:19:51.09:0,51,736	0/0:29,0:29:84.25:0,84,1197	0/0:16,0:16:48.15:0,48,701	0/0:25,0:25:75.25:0,75,1124	0/0:28,0:28:84.24:0,84,1202	0/0:10,0:10:30.10:0,30,448
chr10	52489539	.	AG	A	611.78	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.625;DP=765;FS=23.771;HRun=4;HaplotypeScore=137.7045;InbreedingCoeff=0.9697;MQ=65.22;MQ0=6;MQRankSum=-1.216;QD=24.47;ReadPosRankSum=-4.202;VQSLOD=0.8930;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:81.25:0,81,1109	0/0:12,0:12:33.07:0,33,457	0/0:38,0:25:49.85:0,50,691	0/0:50,0:29:62.90:0,63,797	0/0:17,0:17:39.13:0,39,544	0/0:18,0:18:54.18:0,54,749	0/0:33,0:33:84.15:0,84,1109	1/1:2,23:23:60.17:707,60,0	0/0:28,0:28:78.22:0,78,1055	0/0:30,0:30:90.30:0,90,1233	0/0:19,0:19:45.15:0,45,627	0/0:35,0:35:99:0,99,1333	0/0:35,0:35:93.27:0,93,1273	0/0:35,0:35:96.32:0,96,1327	0/0:45,0:45:99:0,120,1673	0/0:31,0:31:90.29:0,90,1233	0/0:25,0:25:72.17:0,72,949	0/0:14,0:14:42.14:0,42,588	0/0:14,0:14:42.14:0,42,586	0/0:19,0:19:48.12:0,48,645	0/0:31,0:31:75.25:0,75,1046	0/0:29,0:29:81.25:0,81,1112	0/0:19,0:19:37.62:0,38,492	0/0:29,0:29:69.21:0,69,965	0/0:31,0:31:90.30:0,90,1254	0/0:29,0:29:75.25:0,75,1042	0/0:31,0:31:90.30:0,90,1235	0/0:6,0:6:12.02:0,12,150
chr10	52492911	.	A	AAAGAGACCCAG	15859.57	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-2.800;DP=732;FS=1.681;HRun=0;HaplotypeScore=222.0070;InbreedingCoeff=0.9990;MQ=92.43;MQ0=0;MQRankSum=-14.180;QD=112.48;ReadPosRankSum=-3.079;VQSLOD=4.5322;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,13:26:51.17:2471,51,0	1/1:3,11:13:33.11:1764,33,0	0/0:40,0:40:72.24:0,72,2172	0/0:26,0:26:66.16:0,66,1863	0/0:30,0:30:84.28:0,84,2695	0/0:23,0:23:66.23:0,66,2169	0/0:24,0:24:60.18:0,60,1925	1/1:26,6:40:99:4208,105,0	0/0:19,0:19:51.18:0,51,1732	0/0:35,0:35:99:0,102,3370	0/0:26,0:26:72.24:0,72,2271	0/0:32,0:32:87.30:0,87,2875	0/0:24,0:24:60.21:0,60,1917	0/0:28,0:28:78.27:0,78,2431	1/1:16,13:29:72.16:3838,72,0	1/1:9,18:31:75.26:3578,75,0	0/0:25,0:25:72.20:0,72,2236	0/0:16,0:16:42.14:0,42,1313	0/0:22,0:22:51.17:0,51,1514	0/0:30,0:30:78.25:0,78,2367	0/0:33,0:33:81.25:0,81,2439	0/0:28,0:28:72.25:0,72,2404	0/0:24,0:24:66.23:0,66,2238	0/0:15,0:15:36.12:0,36,1228	0/0:22,0:22:63.22:0,63,2073	0/0:30,0:30:87.30:0,87,2779	0/0:31,0:31:87.27:0,87,2637	0/0:8,0:8:21.07:0,21,681
chr10	52495737	.	CT	C	3922.04	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=11.661;DP=779;FS=8.036;HRun=1;HaplotypeScore=74.3880;InbreedingCoeff=0.9990;MQ=87.89;MQ0=0;MQRankSum=-3.433;QD=36.32;ReadPosRankSum=0.666;VQSLOD=3.6710;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,123,1887	1/1:0,15:15:30.03:418,30,0	0/0:26,0:26:69.20:0,69,1003	0/0:29,0:29:77.06:0,77,1075	0/0:34,0:34:98.80:0,99,1532	0/0:25,0:25:75.23:0,75,1152	0/0:32,0:32:96.24:0,96,1412	1/1:1,32:33:96.05:1305,96,0	0/0:27,0:27:81.18:0,81,1183	0/0:27,0:27:81.28:0,81,1294	0/0:20,0:20:57.19:0,57,911	0/0:30,0:30:90.28:0,90,1389	0/0:24,0:24:69.24:0,69,1100	0/0:27,0:27:81.23:0,81,1217	1/1:0,33:33:90.30:1245,90,0	1/1:1,26:27:27.31:955,27,0	0/0:29,0:29:87.27:0,87,1342	0/0:27,0:27:81.28:0,81,1294	0/0:18,0:18:54.18:0,54,842	0/0:38,0:38:99:0,114,1723	0/0:43,0:43:99:0,129,2006	0/0:20,0:20:60.19:0,60,936	0/0:23,0:23:69.24:0,69,1102	0/0:35,0:35:99:0,105,1654	0/0:29,1:30:84.24:0,84,1271	0/0:26,0:26:75.24:0,75,1156	0/0:31,0:31:92.93:0,93,1337	0/0:8,0:8:24.08:0,24,383
chr10	52497040	.	AAAAAC	A	1101.37	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.301;DP=627;FS=3.638;HRun=0;HaplotypeScore=122.5392;InbreedingCoeff=0.9552;MQ=65.81;MQ0=1;MQRankSum=-1.021;QD=17.48;ReadPosRankSum=-0.342;VQSLOD=3.4192;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:10,21:31:17.07:873,17,0	0/0:6,0:6:15.05:0,15,432	0/0:30,0:24:34.65:0,35,728	0/0:28,0:15:22.01:0,22,447	0/0:29,0:29:72.25:0,72,2016	0/0:22,0:22:57.20:0,57,1545	0/0:24,0:24:51.17:0,51,1433	1/1:18,0:32:33.02:347,33,0	0/0:20,0:20:57.20:0,57,1635	0/0:19,0:19:51.13:0,51,1322	0/0:15,0:15:36.12:0,36,998	0/0:23,0:23:57.20:0,57,1584	0/0:32,0:32:63.22:0,63,1762	0/0:27,0:27:69.24:0,69,1911	0/0:26,0:26:51.17:0,51,1394	0/0:25,0:25:68.90:0,69,1890	0/0:30,0:30:66.23:0,66,1885	0/0:17,0:17:39.11:0,39,976	0/0:17,0:17:27.09:0,27,779	0/0:21,0:21:57.18:0,57,1509	0/0:12,0:12:33.11:0,33,907	0/0:17,0:17:42.14:0,42,1211	0/0:18,0:18:36.12:0,36,916	0/0:13,0:13:33.11:0,33,846	0/0:19,0:19:39.13:0,39,1033	0/0:25,0:25:66.21:0,66,1746	0/0:44,0:43:99:0,120,3323	0/0:5,0:5:9.03:0,9,260
chr10	52497435	.	G	GA	1418.27	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-6.525;DP=358;FS=3.698;HRun=0;HaplotypeScore=52.3659;InbreedingCoeff=0.8405;MQ=81.29;MQ0=0;MQRankSum=-1.000;QD=27.27;ReadPosRankSum=6.953;VQSLOD=4.3430;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:50.44:0,50,363	1/1:0,8:8:18.06:245,18,0	0/0:13,0:10:12.68:0,13,151	0/0:17,0:15:29.80:0,30,304	0/0:17,0:17:38.45:0,38,353	0/0:18,0:18:51:0,51,483	0/0:22,0:22:51.76:0,52,574	0/0:19,0:19:39.97:0,40,297	0/0:10,0:10:23.98:0,24,248	0/0:12,0:12:27.06:0,27,309	0/0:9,0:9:26.59:0,27,249	0/0:14,0:14:28.53:0,29,294	0/0:10,0:10:6.03:0,6,73	0/0:10,0:10:23.98:0,24,249	1/1:2,18:20:44.85:612,45,0	1/1:0,21:21:51.17:695,51,0	0/0:9,0:9:14.63:0,15,101	0/0:8,0:8:17.02:0,17,131	0/0:9,0:8:14.05:0,14,97	0/0:8,0:8:8.81:0,9,75	0/0:11,0:11:17.80:0,18,131	1/1:3,0:3:4.53:15,5,0	0/0:8,0:8:10.01:0,10,147	0/0:11,0:10:4.51:0,5,39	0/0:16,0:16:32.98:0,33,313	0/0:12,0:12:32.99:0,33,328	0/0:12,0:12:15.08:0,15,65	0/0:6,0:6:17.92:0,18,151
chr10	52499645	.	TCTCTCCCTGCA	T	7522.96	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=13.409;DP=818;FS=2.055;HRun=0;HaplotypeScore=266.2373;InbreedingCoeff=0.9702;MQ=82.93;MQ0=0;MQRankSum=-12.545;QD=77.56;ReadPosRankSum=1.173;VQSLOD=4.5181;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,120,5682	1/1:1,2:3:6.02:212,6,0	0/0:26,0:26:72.25:0,72,3277	0/0:24,0:24:70.44:0,70,2950	0/0:29,0:29:84.29:0,84,4643	0/0:16,0:16:45.15:0,45,2269	0/0:22,0:22:63.20:0,63,2893	1/1:10,18:28:51.14:1602,51,0	0/0:26,0:26:78.27:0,78,4354	0/0:28,0:28:84.29:0,84,4721	0/0:23,0:23:63.69:0,64,3484	0/0:49,0:49:99:0,147,7947	0/0:35,0:35:99:0,102,5184	0/0:29,0:29:87.30:0,87,4969	1/1:4,36:40:96.33:3384,96,0	1/1:1,25:26:66.23:2325,66,0	0/0:52,0:52:99:0,154,8094	0/0:27,0:27:81.28:0,81,4466	0/0:31,0:31:87.26:0,87,4236	0/0:24,0:24:63.22:0,63,3541	0/0:45,0:45:99:0,126,6600	0/0:22,0:22:66.23:0,66,3547	0/0:28,0:28:81.28:0,81,4318	0/0:37,0:37:99:0,108,5650	0/0:27,0:27:81.25:0,81,4325	0/0:33,0:33:99:0,99,5549	0/0:27,0:27:78.27:0,78,4350	0/0:20,0:20:57.16:0,57,2934
chr10	52500374	.	A	AAAG	5771.02	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=6.929;DP=696;FS=1.368;HRun=0;HaplotypeScore=124.6470;InbreedingCoeff=0.9993;MQ=75.71;MQ0=0;MQRankSum=-10.138;QD=60.11;ReadPosRankSum=-0.270;VQSLOD=6.2773;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:31:93.30:0,93,1533	1/1:1,6:8:24.08:529,24,0	0/0:22,0:22:60.19:0,60,932	0/0:14,0:13:30.10:0,30,443	0/0:35,0:35:93.27:0,93,1533	0/0:17,0:17:48.15:0,48,792	0/0:16,0:16:48.16:0,48,808	1/1:11,23:34:96.32:2030,96,0	0/0:18,0:18:54.18:0,54,874	0/0:40,0:40:99:0,111,1881	0/0:23,0:23:69.21:0,69,1126	0/0:23,0:23:66.23:0,66,1126	0/0:34,0:34:96.33:0,96,1610	0/0:29,0:29:84.24:0,84,1341	1/1:4,27:32:84.28:1824,84,0	1/1:2,20:22:63.21:1387,63,0	0/0:22,0:22:63.05:0,63,983	0/0:23,0:23:63.22:0,63,1074	0/0:25,0:25:63.19:0,63,1001	0/0:30,0:30:87.29:0,87,1457	0/0:17,0:17:51.16:0,51,815	0/0:28,0:28:75.24:0,75,1228	0/0:28,0:28:74.89:0,75,1279	0/0:17,0:17:51.17:0,51,859	0/0:30,0:30:87.30:0,87,1462	0/0:29,0:29:81.27:0,81,1354	0/0:34,0:34:99:0,99,1654	0/0:14,0:14:39.13:0,39,663
chr10	52500412	.	CT	C	3126.45	PASS	AB=0.851;AC=31;AF=0.554;AN=56;BaseQRankSum=4.339;DP=643;FS=6.057;HRun=13;HaplotypeScore=92.8581;InbreedingCoeff=0.5072;MQ=68.80;MQ0=4;MQRankSum=-0.904;QD=7.32;ReadPosRankSum=3.977;VQSLOD=2.7906;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,25:32:63.80:463,64,0	0/0:8,0:8:11.81:0,12,99	0/1:30,2:18:11.07:11,0,140	0/1:14,1:10:22.56:23,0,70	0/1:19,3:22:9.06:9,0,379	0/1:16,3:19:8.66:9,0,396	0/0:20,1:21:26.15:0,26,409	1/1:13,21:35:73.55:528,74,0	0/0:20,0:21:39.92:0,40,396	0/1:26,4:30:33.56:34,0,352	0/0:33,5:39:24.23:0,24,695	1/1:8,17:25:47.69:350,48,0	1/1:8,19:28:23.55:327,24,0	0/0:20,0:20:36.03:0,36,340	0/0:37,0:37:78.05:0,78,736	0/1:17,3:20:11.59:12,0,384	0/1:5,11:17:23.50:168,0,23	1/1:5,16:21:47.69:350,48,0	1/1:3,1:13:21.31:75,21,0	1/1:4,2:23:35.54:116,36,0	1/1:3,0:7:9.03:25,9,0	1/1:4,16:20:18.53:299,19,0	1/1:9,13:22:29.76:219,30,0	1/1:3,10:13:26.84:197,27,0	0/0:23,1:24:20.62:0,21,354	0/0:29,1:31:35.16:0,35,495	1/1:6,1:31:37.57:122,38,0	0/0:14,0:15:29.87:0,30,272
chr10	52502847	.	C	CT	3566.07	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-12.927;DP=691;FS=1.377;HRun=2;HaplotypeScore=64.5462;InbreedingCoeff=0.9901;MQ=83.77;MQ0=0;MQRankSum=-3.322;QD=36.39;ReadPosRankSum=-0.557;VQSLOD=3.8744;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:87.27:0,87,1075	1/1:0,7:7:12.04:173,12,0	0/0:26,0:26:72.05:0,72,829	0/0:15,0:15:21.04:0,21,376	0/0:38,0:38:99:0,105,1288	0/0:29,0:29:87.26:0,87,1065	0/0:19,0:19:57.17:0,57,694	1/1:3,25:28:75.23:1060,75,0	0/0:27,0:27:78.24:0,78,966	0/0:21,0:21:63.19:0,63,771	0/0:27,0:27:81.25:0,81,1003	0/0:28,0:28:84.25:0,84,1027	0/0:24,0:24:72.23:0,72,892	0/0:28,0:28:84.24:0,84,1026	1/1:1,31:32:78.26:1124,78,0	1/1:0,31:31:84.28:1210,84,0	0/0:27,0:27:72.18:0,72,870	0/0:19,0:19:57.18:0,57,706	0/0:23,0:23:63.20:0,63,774	0/0:46,0:46:99:0,138,1684	0/0:10,0:10:30.09:0,30,372	0/0:19,0:19:57.17:0,57,694	0/0:30,0:30:90.27:0,90,1103	0/0:14,0:14:42.13:0,42,521	0/0:26,0:26:69.19:0,69,839	0/0:28,0:28:81.24:0,81,989	0/0:25,0:24:72.21:0,72,878	0/0:15,0:15:45.14:0,45,557
chr10	52503150	.	G	GT	2219.46	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-10.166;DP=563;FS=3.850;HRun=6;HaplotypeScore=55.8619;InbreedingCoeff=0.9885;MQ=73.49;MQ0=0;MQRankSum=-1.877;QD=31.26;ReadPosRankSum=-0.498;VQSLOD=3.9935;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:57.13:0,57,582	1/1:0,5:5:12.04:151,12,0	0/0:17,0:17:35.86:0,36,345	0/0:12,0:13:32.62:0,33,299	0/0:22,0:22:57.12:0,57,581	0/0:35,0:34:99:0,102,1034	0/0:11,0:11:30.02:0,30,289	1/1:2,18:20:51.16:642,51,0	0/0:15,0:15:42.09:0,42,429	0/0:25,0:25:63.14:0,63,643	0/0:24,0:24:60.11:0,60,604	0/0:14,0:14:39.06:0,39,390	0/0:21,0:21:63.14:0,63,642	0/0:25,0:25:72.08:0,72,704	1/1:0,25:25:72.23:906,72,0	1/1:0,21:21:54.17:679,54,0	0/0:29,0:29:78.17:0,78,796	0/0:27,0:27:75.17:0,75,765	0/0:29,0:29:84.18:0,84,852	0/0:30,0:30:87.20:0,87,888	0/0:6,0:6:18.03:0,18,177	0/0:16,0:16:48.11:0,48,490	0/0:21,0:21:60.13:0,60,612	0/0:15,0:15:45.10:0,45,459	0/0:16,0:16:39.07:0,39,390	0/0:24,0:24:72.15:0,72,728	0/0:29,0:29:78.17:0,78,796	0/0:9,0:9:27.06:0,27,275
chr10	52503283	.	TA	T	2955.41	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=13.211;DP=598;FS=2.519;HRun=3;HaplotypeScore=65.0478;InbreedingCoeff=0.9960;MQ=80.85;MQ0=0;MQRankSum=-0.354;QD=32.12;ReadPosRankSum=-1.219;VQSLOD=3.3293;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:75.22:0,75,1041	1/1:0,12:12:30.01:337,30,0	0/0:21,0:21:59.98:0,60,786	0/0:10,0:10:21.06:0,21,268	0/0:35,0:35:99:0,105,1511	0/0:27,0:27:78.70:0,79,1071	0/0:19,0:19:57.12:0,57,760	1/1:1,35:36:99:1254,108,0	0/0:10,0:10:30.10:0,30,432	0/0:32,0:32:96.31:0,96,1350	0/0:21,0:21:60.20:0,60,863	0/0:17,0:17:51.17:0,51,734	0/0:13,0:13:36.11:0,36,501	0/0:28,0:28:84.26:0,84,1174	1/1:0,23:23:66.21:818,66,0	1/1:0,21:21:57.18:707,57,0	0/0:28,0:28:81.27:0,81,1160	0/0:19,0:19:54.18:0,54,777	0/0:24,0:24:72.24:0,72,1037	0/0:30,0:30:90.26:0,90,1242	0/0:9,0:9:27.08:0,27,371	0/0:17,0:17:51.16:0,51,713	0/0:21,0:21:63.18:0,63,864	0/0:16,0:16:45.14:0,45,630	0/0:20,0:20:57.18:0,57,804	0/0:24,0:24:72.23:0,72,1020	0/0:33,0:33:99:0,99,1378	0/0:6,0:6:18.06:0,18,259
chr10	52503620	.	TAAAGCTAAAAACTCAGCTTG	T	6401.33	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=10.872;DP=654;FS=21.448;HRun=0;HaplotypeScore=341.0310;InbreedingCoeff=0.9929;MQ=89.54;MQ0=1;MQRankSum=-10.351;QD=128.03;ReadPosRankSum=2.906;VQSLOD=3.8007;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,166,13978	1/1:0,9:9:18.04:1047,18,0	0/0:24,0:24:71.77:0,72,3821	0/0:28,0:28:75.12:0,75,5041	0/0:18,0:18:54.19:0,54,4464	0/0:13,0:13:39.13:0,39,3608	0/0:24,0:24:72.20:0,72,5776	1/1:0,9:9:26.84:645,27,0	0/0:24,0:24:72.21:0,72,5255	0/0:28,0:28:81.26:0,81,6872	0/0:16,0:16:48.16:0,48,4087	0/0:31,0:31:93.30:0,93,7554	0/0:28,0:28:84.29:0,84,7571	0/0:28,0:28:84.29:0,84,6670	1/1:0,20:20:51.18:2965,51,0	1/1:0,12:12:30.10:1745,30,0	0/0:33,0:33:99:0,99,7973	0/0:28,0:27:81.16:0,81,6090	0/0:25,0:25:75.24:0,75,5458	0/0:23,0:23:69.23:0,69,5759	0/0:28,0:28:84.29:0,84,7584	0/0:16,0:16:48.16:0,48,3614	0/0:23,0:23:69.24:0,69,6737	0/0:37,0:36:99:0,111,8506	0/0:15,0:15:45.15:0,45,4015	0/0:25,0:25:75.25:0,75,6708	0/0:29,0:28:84.29:0,84,7606	0/0:5,0:5:15.05:0,15,1470
chr10	52503857	.	A	AC	2775.39	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=8.801;DP=579;FS=0.477;HRun=1;HaplotypeScore=69.1251;InbreedingCoeff=0.9997;MQ=85.19;MQ0=0;MQRankSum=-7.882;QD=38.02;ReadPosRankSum=-1.892;VQSLOD=3.4215;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:60.19:0,60,779	1/1:5,10:15:39.12:562,39,0	0/0:17,0:17:44.50:0,44,481	0/0:21,0:21:56.20:0,56,687	0/0:19,0:19:54.18:0,54,699	0/0:23,0:23:66.21:0,66,856	0/0:21,0:21:57.15:0,57,708	1/1:0,23:23:69.23:1030,69,0	0/0:21,0:21:63.20:0,63,818	0/0:20,0:20:60.20:0,60,779	0/0:12,0:12:36.12:0,36,466	0/0:24,0:24:72.23:0,72,935	0/0:31,0:31:90.28:0,90,1153	0/0:19,0:19:54.14:0,54,670	1/1:0,20:20:57.19:851,57,0	1/1:3,12:15:33.11:493,33,0	0/0:27,0:27:78.24:0,78,997	0/0:21,0:21:63.20:0,63,818	0/0:21,0:21:60.19:0,60,778	0/0:17,0:17:48.16:0,48,623	0/0:32,0:32:96.31:0,96,1242	0/0:25,0:25:72.22:0,72,919	0/0:14,0:14:39.13:0,39,506	0/0:13,0:13:30.08:0,30,375	0/0:15,0:15:45.12:0,45,568	0/0:23,0:23:66.20:0,66,842	0/0:35,0:35:99:0,102,1324	0/0:13,0:13:36.12:0,36,467
chr10	52503893	.	T	TTTTTTG	3989.05	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=10.602;DP=657;FS=3.511;HRun=0;HaplotypeScore=153.6970;InbreedingCoeff=0.9962;MQ=65.99;MQ0=0;MQRankSum=-9.464;QD=61.37;ReadPosRankSum=-1.975;VQSLOD=3.7392;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:94.15:0,94,1837	1/1:7,6:13:36.12:1196,36,0	0/0:23,0:20:25.05:0,25,734	0/0:19,0:19:38.64:0,39,655	0/0:27,0:27:66.23:0,66,1373	0/0:26,0:26:75.20:0,75,1517	0/0:19,0:19:51.17:0,51,1014	1/1:30,0:30:51:1485,51,0	0/0:27,0:27:64.46:0,64,1509	0/0:16,0:16:36.12:0,36,754	0/0:18,0:18:29.15:0,29,786	0/0:27,0:27:75.26:0,75,1576	0/0:30,0:30:75.24:0,75,1559	0/0:27,0:27:72.22:0,72,1461	1/1:9,4:13:24.08:706,24,0	1/1:3,6:9:18.06:603,18,0	0/0:31,0:31:72.20:0,72,1464	0/0:31,0:31:84.29:0,84,1790	0/0:25,0:25:60.19:0,60,1198	0/0:18,0:18:51.18:0,51,1080	0/0:31,0:31:93.32:0,93,1951	0/0:32,0:32:87.28:0,87,1815	0/0:24,0:24:66.23:0,66,1419	0/0:19,0:19:54.19:0,54,1161	0/0:21,0:21:51.17:0,51,1045	0/0:23,0:23:63.22:0,63,1349	0/0:34,0:34:93.32:0,93,1978	0/0:12,0:12:27.09:0,27,557
chr10	52503899	.	G	GT	440.95	PASS	AB=0.838;AC=4;AF=0.071;AN=56;BaseQRankSum=9.452;DP=670;FS=5.497;HRun=7;HaplotypeScore=84.5504;InbreedingCoeff=0.0765;MQ=63.91;MQ0=0;MQRankSum=-8.699;QD=7.74;ReadPosRankSum=1.373;VQSLOD=0.8307;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,106,1158	0/1:11,3:14:53.92:137,0,54	0/0:27,0:22:58.78:0,59,592	0/0:21,0:21:49.85:0,50,511	0/0:24,0:24:69.20:0,69,782	0/0:28,0:28:78.16:0,78,860	0/0:19,0:19:33.42:0,33,555	0/1:17,10:27:99:232,0,293	0/0:28,0:28:72.51:0,73,895	0/0:16,0:16:45.12:0,45,506	0/0:18,0:18:51.13:0,51,568	0/0:27,0:27:78.22:0,78,885	0/0:28,0:28:81.22:0,81,908	0/0:29,0:29:81.21:0,81,903	0/1:6,2:8:5.84:126,0,6	0/1:8,0:8:8.97:56,0,9	0/0:32,0:32:81.20:0,81,904	0/0:36,0:36:99:0,99,1108	0/0:23,0:23:60.17:0,60,680	0/0:18,0:18:54.15:0,54,612	0/0:34,0:34:99:0,102,1156	0/0:31,0:31:87.23:0,87,977	0/0:25,0:25:72.19:0,72,805	0/0:22,0:22:66.19:0,66,747	0/0:19,0:19:54.14:0,54,604	0/0:25,0:25:72.20:0,72,816	0/0:33,0:33:93.27:0,93,1055	0/0:13,0:13:30.08:0,30,339
chr10	52503905	.	C	CTTTG	1737.46	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=8.439;DP=677;FS=0.743;HRun=0;HaplotypeScore=121.4502;InbreedingCoeff=0.9896;MQ=62.64;MQ0=0;MQRankSum=-8.238;QD=29.96;ReadPosRankSum=-1.327;VQSLOD=3.2684;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:37:87.28:0,87,1421	1/1:6,8:14:19.95:446,20,0	0/0:31,0:25:42.13:0,42,642	0/0:21,0:20:35.63:0,36,514	0/0:24,0:24:60.20:0,60,986	0/0:26,0:26:54.18:0,54,899	0/0:20,0:20:40.69:0,41,677	1/1:19,6:25:33.10:744,33,0	0/0:28,0:28:66.05:0,66,1098	0/0:17,0:17:39.13:0,39,644	0/0:19,0:19:54.17:0,54,853	0/0:27,0:27:60.21:0,60,995	0/0:28,0:28:75.24:0,75,1214	0/0:28,0:28:72.25:0,72,1198	1/1:5,4:9:15.52:336,16,0	1/1:2,8:10:15.99:370,16,0	0/0:27,0:27:69.21:0,69,1111	0/0:41,0:41:99:0,108,1684	0/0:23,0:23:39.10:0,39,593	0/0:18,0:18:48.16:0,48,799	0/0:37,0:37:84.27:0,84,1368	0/0:31,0:31:75.26:0,75,1239	0/0:26,0:26:69.23:0,69,1120	0/0:23,0:23:60.21:0,60,995	0/0:19,0:19:54.18:0,54,870	0/0:26,0:26:72.23:0,72,1153	0/0:31,0:31:81.28:0,81,1349	0/0:10,0:10:21.02:0,21,296
chr10	52504097	.	GTGT	G	2354.46	PASS	AB=0.606;AC=7;AF=0.125;AN=56;BaseQRankSum=13.931;DP=769;FS=2.678;HRun=0;HaplotypeScore=136.9130;InbreedingCoeff=0.8409;MQ=84.38;MQ0=0;MQRankSum=-12.713;QD=29.07;ReadPosRankSum=-2.192;VQSLOD=3.6748;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,129,3122	1/1:1,5:6:18.02:212,18,0	0/0:24,0:24:69.23:0,69,1530	0/0:27,0:27:81.24:0,81,1789	0/0:21,0:21:63.22:0,63,1549	0/0:12,0:12:36.12:0,36,840	0/0:31,0:31:93.30:0,93,2224	1/1:10,24:34:86:1027,86,0	0/0:30,0:30:90.31:0,90,2127	0/0:23,0:23:63.22:0,63,1508	0/0:11,0:11:33.11:0,33,813	0/0:42,0:42:99:0,123,2871	0/0:38,0:38:99:0,114,2793	0/0:33,0:33:99:0,99,2359	1/1:2,19:21:56.73:684,57,0	0/1:7,13:20:13.90:580,0,14	0/0:45,0:45:99:0,135,3291	0/0:38,0:38:99:0,114,2720	0/0:19,0:19:57.20:0,57,1403	0/0:19,0:19:54.18:0,54,1267	0/0:43,0:43:99:0,126,2976	0/0:31,0:31:93.30:0,93,2163	0/0:15,0:15:45.15:0,45,1104	0/0:48,0:48:99:0,144,3386	0/0:22,0:22:60.21:0,60,1429	0/0:36,0:36:99:0,108,2546	0/0:20,0:20:60.21:0,60,1439	0/0:16,0:16:48.16:0,48,1182
chr10	52504102	.	GTTCTA	G	2870.45	PASS	AB=0.517;AC=7;AF=0.125;AN=56;BaseQRankSum=13.087;DP=751;FS=2.915;HRun=0;HaplotypeScore=161.5117;InbreedingCoeff=0.8311;MQ=85.73;MQ0=0;MQRankSum=-11.891;QD=43.49;ReadPosRankSum=-0.524;VQSLOD=3.8116;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,144,4537	1/1:0,5:5:15.05:247,15,0	0/0:25,0:25:72.24:0,72,1909	0/0:28,0:28:78.27:0,78,2344	0/0:23,0:23:69.19:0,69,2117	0/0:13,0:13:36.12:0,36,1122	0/0:30,0:30:90.27:0,90,2776	1/1:0,27:27:78.27:1291,78,0	0/0:29,0:29:87.30:0,87,2783	0/0:21,0:21:57.20:0,57,1788	0/0:12,0:12:36.12:0,36,1131	0/0:37,0:37:99:0,111,3501	0/0:38,0:38:99:0,114,3542	0/0:32,0:32:96.32:0,96,3024	1/1:0,19:19:52.42:847,52,0	0/1:1,14:15:51.81:633,0,52	0/0:45,0:45:99:0,135,4297	0/0:38,0:38:99:0,114,3602	0/0:21,0:21:63.22:0,63,2023	0/0:18,0:18:48.16:0,48,1549	0/0:44,0:44:99:0,132,4081	0/0:30,0:30:87.25:0,87,2604	0/0:15,0:15:42.13:0,42,1272	0/0:48,0:48:99:0,144,4643	0/0:19,0:19:57.20:0,57,1838	0/0:34,0:34:96.32:0,96,2976	0/0:20,0:20:60.21:0,60,1937	0/0:16,0:16:48.16:0,48,1551
chr10	52505072	.	AAAT	A	3793.20	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=10.665;DP=669;FS=1.989;HRun=0;HaplotypeScore=99.1682;InbreedingCoeff=0.9922;MQ=80.93;MQ0=0;MQRankSum=-3.767;QD=40.35;ReadPosRankSum=-1.010;VQSLOD=4.2115;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:84.27:0,84,1772	1/1:0,8:8:24.08:392,24,0	0/0:20,0:20:54.13:0,54,1046	0/0:16,0:16:38.80:0,39,792	0/0:26,0:26:75.24:0,75,1622	0/0:28,0:28:75.22:0,75,1542	0/0:23,0:23:63.20:0,63,1365	1/1:4,25:29:75.22:1165,75,0	0/0:26,0:26:75.26:0,75,1664	0/0:27,0:27:78.27:0,78,1743	0/0:19,0:19:57.19:0,57,1228	0/0:25,0:25:69.24:0,69,1530	0/0:34,0:34:99:0,99,2156	0/0:21,0:21:60.20:0,60,1300	1/1:0,23:23:60.20:980,60,0	1/1:4,30:34:17.24:1256,17,0	0/0:34,0:34:99:0,99,2189	0/0:15,0:15:45.15:0,45,986	0/0:22,0:22:54.19:0,54,1187	0/0:29,0:29:84.28:0,84,1854	0/0:11,0:11:33.11:0,33,737	0/0:20,0:20:54.19:0,54,1196	0/0:27,0:26:75.26:0,75,1652	0/0:19,0:19:54.19:0,54,1189	0/0:30,0:30:87.26:0,87,1877	0/0:23,0:23:63.22:0,63,1408	0/0:45,0:45:99:0,126,2768	0/0:5,0:5:15.05:0,15,316
chr10	52505588	.	CT	C	3019.06	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=11.764;DP=688;FS=3.039;HRun=4;HaplotypeScore=67.3877;InbreedingCoeff=0.9976;MQ=82.83;MQ0=0;MQRankSum=0.243;QD=29.03;ReadPosRankSum=-0.754;VQSLOD=3.0873;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:87.26:0,87,1181	1/1:1,9:10:18.05:216,18,0	0/0:28,0:27:68.31:0,68,924	0/0:18,0:17:39.51:0,40,483	0/0:32,0:32:90.29:0,90,1242	0/0:28,0:28:75.22:0,75,1002	0/0:20,0:20:60.18:0,60,807	1/1:3,42:45:99:1488,126,0	0/0:15,0:15:42.13:0,42,573	0/0:25,0:25:72.22:0,72,978	0/0:31,0:31:84.26:0,84,1141	0/0:25,0:25:63.21:0,63,877	0/0:24,0:24:69.15:0,69,865	0/0:26,0:26:78.17:0,78,1032	1/1:1,29:30:78.24:935,78,0	1/1:1,18:19:45.14:540,45,0	0/0:26,0:26:78.21:0,78,1024	0/0:22,0:22:63.21:0,63,880	0/0:20,0:20:54.09:0,54,728	0/0:32,0:32:90.29:0,90,1244	0/0:20,0:20:60.16:0,60,787	0/0:23,0:23:65.89:0,66,902	0/0:22,0:22:64.08:0,64,866	0/0:15,0:15:42.11:0,42,566	0/0:34,0:34:99:0,99,1316	0/0:32,0:32:96.31:0,96,1328	0/0:22,0:22:60.09:0,60,795	0/0:14,0:14:33.10:0,33,445
chr10	52505929	.	T	TTTCTTC	1457.38	PASS	AC=6;AF=0.111;AN=54;BaseQRankSum=7.040;DP=647;FS=0.000;HRun=0;HaplotypeScore=150.1378;InbreedingCoeff=0.9699;MQ=87.49;MQ0=0;MQRankSum=-6.956;QD=76.70;ReadPosRankSum=3.357;VQSLOD=4.7049;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,132,3322	1/1:1,2:3:9.02:208,9,0	0/0:22,0:22:60.64:0,61,1344	0/0:23,0:23:57.67:0,58,1349	0/0:35,0:35:99:0,105,2587	0/0:22,0:22:66.23:0,66,1663	0/0:19,0:19:57.18:0,57,1373	./.	0/0:25,0:25:75.24:0,75,1806	0/0:26,0:26:78.27:0,78,1925	0/0:24,0:24:66.22:0,66,1636	0/0:30,0:30:90.31:0,90,2288	0/0:27,0:27:75.26:0,75,1853	0/0:32,0:32:87.30:0,87,2166	1/1:0,10:10:30.10:860,30,0	1/1:0,6:6:18.06:525,18,0	0/0:28,0:28:84.26:0,84,2035	0/0:28,0:28:81.28:0,81,2043	0/0:21,0:21:63.22:0,63,1600	0/0:27,0:27:81.28:0,81,2063	0/0:15,0:15:45.15:0,45,1126	0/0:23,0:23:66.23:0,66,1627	0/0:24,0:24:66.19:0,66,1557	0/0:29,0:29:87.28:0,87,2170	0/0:31,0:31:93.28:0,93,2250	0/0:27,0:27:81.26:0,81,1966	0/0:37,0:36:99:0,111,2716	0/0:5,0:5:15.05:0,15,353
chr10	52505935	.	CTGAG	C	276.67	PASS	AC=6;AF=0.111;AN=54;BaseQRankSum=7.235;DP=634;FS=0.893;HRun=0;HaplotypeScore=121.4924;InbreedingCoeff=0.9549;MQ=88.67;MQ0=0;MQRankSum=-7.128;QD=15.37;ReadPosRankSum=3.558;VQSLOD=3.2272;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,123,3454	1/1:0,2:2:6:51,6,0	0/0:21,0:21:60.02:0,60,1496	0/0:25,0:25:60.17:0,60,1527	0/0:31,0:31:93.32:0,93,2671	0/0:24,0:24:72.25:0,72,2035	0/0:18,0:18:54.19:0,54,1565	./.	0/0:25,0:25:75.26:0,75,2040	0/0:25,0:25:72.25:0,72,2064	0/0:21,0:21:60.21:0,60,1716	0/0:28,0:28:84.29:0,84,2331	0/0:24,0:24:69.24:0,69,1918	0/0:32,0:32:93.32:0,93,2659	1/1:0,10:10:29.79:216,30,0	1/1:0,6:6:17.94:142,18,0	0/0:28,0:28:84.29:0,84,2413	0/0:29,0:29:87.30:0,87,2439	0/0:22,0:22:66.22:0,66,1846	0/0:30,0:30:90.30:0,90,2506	0/0:14,0:14:42.14:0,42,1177	0/0:21,0:21:63.22:0,63,1813	0/0:24,0:24:69.22:0,69,1937	0/0:28,0:28:84.27:0,84,2331	0/0:33,0:33:99:0,99,2784	0/0:25,0:25:75.25:0,75,2113	0/0:39,0:38:99:0,117,3321	0/0:6,0:6:18.06:0,18,483
chr10	52505943	.	T	TCCA	2943.90	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=12.274;DP=657;FS=0.517;HRun=0;HaplotypeScore=125.2568;InbreedingCoeff=0.9886;MQ=83.16;MQ0=0;MQRankSum=-11.489;QD=52.57;ReadPosRankSum=-0.828;VQSLOD=4.9663;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,114,2125	1/1:6,2:8:24.07:437,24,0	0/0:16,0:16:42.14:0,42,768	0/0:23,0:23:57.11:0,57,949	0/0:31,0:31:90.31:0,90,1676	0/0:25,0:25:75.26:0,75,1389	0/0:20,0:20:60.19:0,60,1077	1/1:17,0:17:48.12:941,48,0	0/0:23,0:23:11.99:0,12,1095	0/0:25,0:25:75.25:0,75,1366	0/0:23,0:23:63.22:0,63,1163	0/0:27,0:27:75.24:0,75,1365	0/0:24,0:24:69.21:0,69,1212	0/0:33,0:33:93.31:0,93,1699	1/1:8,10:18:54.18:985,54,0	1/1:7,6:13:39.13:740,39,0	0/0:28,0:28:84.27:0,84,1523	0/0:26,0:26:78.27:0,78,1452	0/0:19,0:19:57.19:0,57,1033	0/0:30,0:30:90.31:0,90,1675	0/0:13,0:13:39.13:0,39,718	0/0:21,0:21:63.19:0,63,1112	0/0:24,0:24:63.22:0,63,1173	0/0:27,0:27:81.26:0,81,1477	0/0:34,0:34:96.28:0,96,1694	0/0:24,0:24:72.25:0,72,1330	0/0:38,0:38:99:0,111,2069	0/0:6,0:6:18.06:0,18,336
chr10	52506073	.	C	CTTTT	1876.38	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=-1.796;DP=620;FS=17.617;HRun=10;HaplotypeScore=107.3052;InbreedingCoeff=0.9043;MQ=68.61;MQ0=0;MQRankSum=-4.987;QD=18.76;ReadPosRankSum=-2.482;VQSLOD=-0.1663;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:39:88.36:0,88,1196	1/1:1,1:8:12.04:220,12,0	0/0:12,0:13:20.71:0,21,258	0/1:11,0:12:0.75:1,0,155	0/0:31,0:34:82.22:0,82,1138	0/0:18,0:18:51.15:0,51,718	0/0:21,0:22:51.08:0,51,702	1/1:27,0:33:26.64:480,27,0	0/0:19,0:19:42.03:0,42,557	0/0:18,0:18:33:0,33,451	0/0:24,0:24:53.10:0,53,723	0/0:29,0:30:84.22:0,84,1151	0/0:28,0:28:63.04:0,63,891	0/0:13,0:14:30.02:0,30,405	1/1:7,12:22:24.08:456,24,0	1/1:4,18:25:38.87:876,39,0	0/0:37,0:37:77.09:0,77,1211	0/0:15,0:16:43.19:0,43,566	0/0:26,0:26:54.03:0,54,759	0/0:23,0:24:52.30:0,52,724	0/0:17,0:17:39.02:0,39,531	0/0:17,0:17:39.02:0,39,549	0/0:20,0:21:41.99:0,42,553	0/0:24,0:24:57.08:0,57,785	0/0:9,0:10:17.95:0,18,236	0/0:25,0:25:66.16:0,66,934	0/0:34,0:34:85.45:0,85,1191	0/0:9,0:9:11.96:0,12,167
chr10	52506471	.	G	GAA	5763.76	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=14.339;DP=702;FS=0.817;HRun=1;HaplotypeScore=97.6338;InbreedingCoeff=0.9967;MQ=73.37;MQ0=0;MQRankSum=-5.612;QD=53.37;ReadPosRankSum=-0.008;VQSLOD=4.5985;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,117,1855	1/1:0,10:10:24.08:473,24,0	0/0:20,0:20:60.15:0,60,908	0/0:20,0:20:17.46:0,17,744	0/0:21,0:21:63.22:0,63,1025	0/0:35,0:35:99:0,105,1684	0/0:22,0:22:66.23:0,66,1077	1/1:0,24:25:75.24:1455,75,0	0/0:28,0:28:84.24:0,84,1314	0/0:29,0:29:84.22:0,84,1273	0/0:15,0:15:42.11:0,42,623	0/0:28,0:28:84.27:0,84,1337	0/0:29,0:29:87.25:0,87,1341	0/0:23,0:23:69.24:0,69,1125	1/1:0,36:37:99:1941,102,0	1/1:0,36:36:96.33:1895,96,0	0/0:22,0:22:63.19:0,63,1000	0/0:17,0:17:51.14:0,51,804	0/0:26,0:26:72.25:0,72,1170	0/0:29,0:29:81.28:0,81,1317	0/0:26,0:26:72.22:0,72,1134	0/0:32,0:32:93.25:0,93,1461	0/0:14,0:14:30.09:0,30,465	0/0:20,0:20:60.20:0,60,979	0/0:20,0:20:57.19:0,57,930	0/0:27,0:27:81.28:0,81,1321	0/0:39,0:39:99:0,117,1828	0/0:12,0:12:36.12:0,36,584
chr10	52506791	.	C	CTAA	8127.54	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-9.214;DP=802;FS=1.140;HRun=0;HaplotypeScore=122.9464;InbreedingCoeff=0.9980;MQ=74.70;MQ0=0;MQRankSum=-2.194;QD=58.47;ReadPosRankSum=0.879;VQSLOD=6.6679;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,138,2519	0/0:10,0:10:27.09:0,27,503	0/0:13,0:12:23.40:0,23,360	0/0:17,0:17:28.47:0,28,486	0/0:31,0:31:84.27:0,84,1530	0/0:23,0:23:66.23:0,66,1198	0/0:30,0:30:87.28:0,87,1570	0/0:44,0:44:99:0,126,2258	0/0:33,0:33:99:0,99,1807	0/0:40,0:40:99:0,120,2196	0/0:7,0:7:21.07:0,21,391	1/1:1,34:37:99:2383,99,0	1/1:0,33:33:90.31:2178,90,0	0/0:39,0:39:99:0,117,2105	0/0:48,0:48:99:0,129,2273	0/0:38,0:38:99:0,108,1980	0/0:43,0:43:99:0,126,2210	0/0:28,0:28:84.29:0,84,1549	0/0:15,0:15:39.13:0,39,726	0/0:25,0:25:75.22:0,75,1301	0/0:45,0:45:99:0,135,2514	1/1:2,24:27:72.32:1339,72,0	1/1:3,13:17:47.78:747,48,0	1/1:1,24:25:60.68:1480,61,0	0/0:19,0:19:48.11:0,48,826	0/0:29,0:29:84.29:0,84,1563	0/0:29,0:29:87.30:0,87,1619	0/0:11,0:10:33.11:0,33,615
chr10	52507039	.	TA	T	3031.02	PASS	AB=0.938;AC=16;AF=0.286;AN=56;BaseQRankSum=7.608;DP=702;FS=2.953;HRun=12;HaplotypeScore=101.0599;InbreedingCoeff=0.8282;MQ=68.14;MQ0=2;MQRankSum=-1.347;QD=13.47;ReadPosRankSum=4.147;VQSLOD=3.9520;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,25:29:67.17:501,67,0	0/0:13,0:13:23.46:0,23,144	0/0:19,0:16:28.13:0,28,250	0/1:9,0:8:6.11:6,0,105	0/0:41,0:42:99:0,105,1035	0/0:23,0:24:62.95:0,63,617	0/0:26,2:28:36.87:0,37,549	1/1:19,18:37:50.67:405,51,0	0/0:24,0:24:61.55:0,62,574	0/0:37,2:40:66.81:0,67,836	0/0:18,0:20:50.76:0,51,480	1/1:3,22:26:55.82:424,56,0	1/1:5,29:34:74.69:580,75,0	0/0:22,0:22:51.10:0,51,516	0/0:34,1:35:33.98:0,34,388	0/0:21,0:21:43.06:0,43,267	0/0:11,0:11:30.05:0,30,298	0/1:18,3:21:7.40:7,0,296	0/0:24,2:27:3.64:0,4,413	0/0:24,1:25:27.86:0,28,459	0/0:15,0:15:36.05:0,36,357	1/1:2,17:20:40.85:308,41,0	1/1:1,18:19:53.79:418,54,0	1/1:3,27:30:74.70:580,75,0	0/0:24,3:27:33.88:0,34,525	0/0:24,0:24:45.09:0,45,457	0/0:33,0:33:90:0,90,891	0/0:25,1:26:54.89:0,55,728
chr10	52507387	.	TGTCA	T	5630.42	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=15.655;DP=765;FS=9.945;HRun=0;HaplotypeScore=145.4204;InbreedingCoeff=0.9997;MQ=88.84;MQ0=0;MQRankSum=-15.133;QD=50.27;ReadPosRankSum=-0.027;VQSLOD=5.5141;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,123,3357	1/1:0,11:11:27.09:538,27,0	0/0:35,0:35:95.32:0,95,2439	0/0:26,0:27:68.19:0,68,1823	0/0:39,0:39:99:0,117,3211	0/0:24,0:24:72.25:0,72,2014	0/0:27,0:27:81.28:0,81,2244	1/1:9,18:27:54.17:1043,54,0	0/0:33,0:33:99:0,99,2746	0/0:21,0:21:63.22:0,63,1758	0/0:23,0:23:69.24:0,69,1895	0/0:31,0:31:93.31:0,93,2543	0/0:30,0:30:87.30:0,87,2424	0/0:23,0:23:69.24:0,69,1906	1/1:1,26:27:78.26:1512,78,0	1/1:4,43:47:99:2537,129,0	0/0:25,0:25:75.26:0,75,2098	0/0:20,0:20:60.21:0,60,1666	0/0:12,0:12:36.12:0,36,984	0/0:24,0:24:69.21:0,69,1825	0/0:46,0:46:99:0,138,3763	0/0:29,0:29:84.29:0,84,2340	0/0:20,0:20:60.21:0,60,1678	0/0:31,0:31:93.30:0,93,2466	0/0:21,0:21:63.22:0,63,1735	0/0:22,0:22:63.22:0,63,1763	0/0:25,0:24:72.25:0,72,2012	0/0:24,0:24:72.25:0,72,2013
chr10	52507725	.	TG	T	3680.22	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=13.697;DP=574;FS=6.004;HRun=1;HaplotypeScore=67.5230;InbreedingCoeff=0.9920;MQ=72.44;MQ0=0;MQRankSum=-0.315;QD=37.17;ReadPosRankSum=-2.258;VQSLOD=3.1305;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,102,1398	1/1:0,11:11:27.09:374,27,0	0/0:11,0:11:30.08:0,30,412	0/0:9,0:8:15.01:0,15,197	0/0:26,0:26:78.26:0,78,1137	0/0:18,0:18:54.13:0,54,730	0/0:9,0:9:27.07:0,27,375	1/1:0,40:40:99:1548,120,0	0/0:15,0:15:45.10:0,45,598	0/0:29,0:29:87.29:0,87,1266	0/0:21,0:21:63.21:0,63,913	0/0:15,0:15:45.14:0,45,639	0/0:19,0:19:57.18:0,57,812	0/0:17,0:17:51.12:0,51,685	1/1:0,27:27:69.23:963,69,0	1/1:0,21:21:57.19:795,57,0	0/0:27,0:27:81.23:0,81,1138	0/0:27,0:26:81.08:0,81,1052	0/0:33,0:33:99:0,99,1323	0/0:26,0:26:78.22:0,78,1082	0/0:6,0:6:18.04:0,18,243	0/0:15,0:15:45.12:0,45,620	0/0:23,0:23:69.20:0,69,969	0/0:8,0:8:24.08:0,24,349	0/0:28,0:28:84.28:0,84,1229	0/0:23,0:23:69.21:0,69,973	0/0:18,0:18:54.11:0,54,763	0/0:18,0:18:51.17:0,51,745
chr10	52509146	.	CTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	C	1144.89	PASS	AB=0.905;AC=7;AF=0.130;AN=54;BaseQRankSum=3.323;DP=622;FS=26.678;HRun=0;HaplotypeScore=421.2546;InbreedingCoeff=0.5142;MQ=67.91;MQ0=26;MQRankSum=-1.511;QD=16.13;ReadPosRankSum=-1.995;VQSLOD=0.7119;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:12.04:0,12,1146	0/0:6,0:6:6.02:0,6,456	0/0:40,0:25:13.29:0,13,319	0/0:41,0:23:3.01:0,3,44	0/0:8,0:8:6.02:0,6,890	0/0:22,0:22:24.42:0,24,2583	0/0:19,0:17:30.09:0,30,2059	0/0:31,0:29:38.80:0,39,1410	0/0:16,0:16:24.08:0,24,2417	0/0:27,0:25:22.89:0,23,1826	0/0:8,0:8:3.01:0,3,410	1/1:13,7:19:3.01:258,3,0	0/1:17,2:19:32.09:252,0,32	0/0:25,0:30:28.34:0,28,2477	0/0:23,0:25:33.11:0,33,2050	0/0:25,0:26:24.97:0,25,1434	0/0:24,0:26:39.10:0,39,2912	0/0:21,0:22:46.04:0,46,2766	0/0:13,0:13:12.04:0,12,607	0/0:16,0:16:12.98:0,13,749	0/0:40,0:40:26.25:0,26,1111	./.	1/1:9,5:14:7.43:498,7,0	1/1:13,4:17:3.01:258,3,0	0/0:17,0:17:18.06:0,18,1768	0/0:27,0:26:39.13:0,39,3314	0/0:21,0:21:24.08:0,24,1562	0/0:21,0:18:35.60:0,36,2612
chr10	52509564	.	TTCTC	T	4778.57	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=4.565;DP=885;FS=2.392;HRun=0;HaplotypeScore=199.1935;InbreedingCoeff=0.8714;MQ=70.36;MQ0=1;MQRankSum=-7.709;QD=41.92;ReadPosRankSum=-0.916;VQSLOD=4.6043;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:75,0:75:99:0,217,5610	0/0:11,0:11:33.10:0,33,845	0/1:17,0:16:14.83:15,0,824	0/0:21,0:21:56.96:0,57,1480	0/0:30,0:30:81.26:0,81,2116	0/0:31,0:31:90.28:0,90,2298	0/0:36,0:36:96.30:0,96,2493	0/0:39,0:39:99:0,102,2639	0/0:28,0:28:75.24:0,75,1976	0/0:36,0:36:99:0,108,2792	0/0:20,0:20:54.16:0,54,1363	0/0:32,0:32:87.30:0,87,2382	0/0:48,0:48:99:0,144,3780	0/0:46,0:46:99:0,135,3504	0/0:42,0:42:99:0,114,3007	0/0:42,0:42:99:0,123,3319	0/0:42,0:42:99:0,126,3396	0/0:17,0:17:51.14:0,51,1270	1/1:3,15:18:51.12:916,51,0	1/1:4,20:24:69.16:1221,69,0	1/1:3,22:25:63.04:1040,63,0	0/0:31,0:31:84.27:0,84,2185	0/0:31,0:31:87.30:0,87,2331	0/0:43,0:43:99:0,126,3246	0/0:27,0:27:72.25:0,72,1972	0/0:30,0:30:90.27:0,90,2246	1/1:0,30:30:84.24:1587,84,0	0/0:13,0:13:39.13:0,39,1066
chr10	52509901	.	G	GTGA	7203.64	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-14.272;DP=810;FS=2.177;HRun=0;HaplotypeScore=109.9108;InbreedingCoeff=1.0000;MQ=77.86;MQ0=0;MQRankSum=-1.993;QD=58.09;ReadPosRankSum=0.026;VQSLOD=6.7338;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,154,2418	1/1:2,15:17:45.15:963,45,0	0/0:21,0:21:59.41:0,59,904	0/0:14,0:14:41.36:0,41,577	0/0:24,0:24:69.24:0,69,1108	0/0:32,0:32:93.32:0,93,1486	0/0:19,0:19:54.18:0,54,867	1/1:4,29:34:90.29:1943,90,0	0/0:28,0:28:75.26:0,75,1205	0/0:42,0:42:99:0,123,1946	0/0:18,0:18:51.16:0,51,796	0/0:40,0:40:99:0,111,1743	0/0:27,0:27:69.19:0,69,1059	0/0:31,0:31:84.27:0,84,1327	1/1:4,32:37:96.33:2113,96,0	1/1:2,34:36:99:2185,99,0	0/0:18,0:18:54.18:0,54,868	0/0:23,0:23:63.21:0,63,1013	0/0:20,0:20:48.16:0,48,762	0/0:34,0:34:93.32:0,93,1487	0/0:41,0:41:99:0,111,1752	0/0:26,0:26:69.24:0,69,1103	0/0:31,0:31:87.30:0,87,1396	0/0:26,0:26:72.23:0,72,1124	0/0:32,0:32:93.31:0,93,1471	0/0:29,0:29:84.29:0,84,1340	0/0:39,0:39:99:0,111,1736	0/0:16,0:16:39.13:0,39,626
chr10	52510689	.	CGG	C	5116.37	PASS	AB=0.558;AC=25;AF=0.446;AN=56;BaseQRankSum=-0.869;DP=534;FS=13.542;HRun=10;HaplotypeScore=89.0673;InbreedingCoeff=0.7177;MQ=75.52;MQ0=1;MQRankSum=-1.939;QD=16.09;ReadPosRankSum=4.912;VQSLOD=1.8761;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,40:44:73.82:1044,74,0	1/1:0,0:3:5.49:24,5,0	0/0:20,0:16:0.99:0,1,269	0/0:13,0:11:10.23:0,10,101	0/0:5,0:17:34.40:0,34,177	0/0:11,0:11:24.08:0,24,377	0/0:20,0:22:48.12:0,48,719	1/1:1,0:13:32.80:142,33,0	0/0:7,0:20:39.94:0,40,214	0/0:5,0:14:15.98:0,16,87	0/0:4,0:12:10.58:0,11,61	1/1:3,20:23:39.09:433,39,0	1/1:1,10:11:14.97:167,15,0	0/0:6,0:13:20.98:0,21,125	1/1:2,0:26:54.82:239,55,0	1/1:6,0:30:51.93:225,52,0	1/1:7,35:42:87.23:966,87,0	1/1:5,17:22:38.98:493,39,0	0/0:5,0:17:33.04:0,33,132	0/0:6,0:12:17.47:0,17,60	0/1:6,1:29:30.75:31,0,130	1/1:1,12:13:30.07:334,30,0	0/1:3,15:18:16.10:271,0,16	1/1:5,27:32:66.16:735,66,0	0/1:3,1:12:11.97:12,0,74	0/0:2,0:11:22.96:0,23,94	0/0:8,0:25:44.94:0,45,251	0/0:3,0:8:10.48:0,10,49
chr10	52510876	.	A	AT	1656.81	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=-6.382;DP=521;FS=6.437;HRun=6;HaplotypeScore=70.5528;InbreedingCoeff=0.1697;MQ=78.26;MQ0=0;MQRankSum=-0.205;QD=6.14;ReadPosRankSum=-2.140;VQSLOD=-0.4332;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:9.86:0,10,64	1/1:2,8:10:23.75:275,24,0	0/0:19,0:17:7.19:0,7,212	0/1:17,0:16:1.64:2,0,145	0/0:15,0:15:33.05:0,33,325	0/0:23,0:23:54.10:0,54,543	0/0:18,0:18:51.05:0,51,489	0/0:18,0:18:48.05:0,48,469	0/0:19,0:19:54.08:0,54,530	0/0:16,0:16:36.01:0,36,339	0/0:13,0:13:30.05:0,30,301	0/1:21,0:21:0.21:0,0,38	0/1:17,0:17:11.41:54,0,11	0/0:15,0:15:39.06:0,39,385	1/1:2,18:20:48.15:603,48,0	1/1:3,22:25:48.15:604,48,0	0/1:21,0:21:21.88:44,0,22	0/1:24,0:24:18.16:18,0,32	0/1:31,0:31:0.74:75,0,1	0/1:21,0:21:21.29:21,0,32	0/1:15,0:15:24.70:29,0,25	0/0:22,0:22:0.23:0,0,52	0/1:16,0:16:8.50:27,0,8	0/1:10,0:10:8.35:14,0,8	0/0:14,0:14:36.02:0,36,339	0/0:20,0:20:57.07:0,57,553	0/1:22,0:22:32.83:58,0,33	0/0:10,0:10:24.05:0,24,245
chr10	52512497	.	TG	T	3753.18	PASS	AB=0.984;AC=20;AF=0.357;AN=56;BaseQRankSum=5.010;DP=616;FS=8.599;HRun=3;HaplotypeScore=103.8134;InbreedingCoeff=0.1823;MQ=64.21;MQ0=6;MQRankSum=1.402;QD=10.88;ReadPosRankSum=-0.512;VQSLOD=0.8652;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:28:6.34:6,0,228	1/1:0,8:8:21.07:259,21,0	0/0:36,0:18:25.46:0,25,329	0/0:26,1:15:23.68:0,24,270	0/0:29,0:29:87.17:0,87,1131	0/0:23,0:23:69.15:0,69,883	0/0:19,0:19:54.16:0,54,726	1/1:1,32:33:95:1055,95,0	0/0:14,0:14:42.09:0,42,519	0/0:24,0:24:69.15:0,69,915	0/0:17,0:17:48.13:0,48,640	0/1:22,0:22:58.11:58,0,81	1/1:17,0:17:8.66:83,9,0	0/0:18,0:19:45.01:0,45,639	1/1:4,29:33:90.17:1118,90,0	1/1:0,24:24:66.21:814,66,0	0/1:34,0:34:76.59:77,0,127	0/1:22,0:22:13.70:14,0,94	0/1:35,1:35:41.30:41,0,172	0/0:17,0:17:2.34:0,2,137	0/1:11,2:12:34.26:62,0,34	0/1:15,0:15:35.54:61,0,36	0/1:18,0:18:54.97:63,0,55	0/1:18,0:18:21.15:21,0,109	0/0:33,0:33:99:0,99,1327	0/0:12,0:12:36.05:0,36,409	0/1:24,0:24:20.66:21,0,147	0/0:1,0:1:3.01:0,3,42
chr10	52512500	.	GT	G	2354.57	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=9.624;DP=611;FS=4.941;HRun=9;HaplotypeScore=111.3077;InbreedingCoeff=0.9127;MQ=60.83;MQ0=6;MQRankSum=-2.338;QD=12.66;ReadPosRankSum=1.836;VQSLOD=3.2536;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:72.10:0,72,784	0/1:9,0:9:2.66:58,0,3	0/0:33,0:15:20.45:0,20,175	0/0:25,1:14:13.36:0,13,147	0/0:32,0:32:93.23:0,93,1031	0/0:22,0:22:60.18:0,60,692	0/0:18,0:18:51.12:0,51,565	1/1:34,0:34:34.53:218,35,0	0/0:16,0:16:42.10:0,42,466	0/0:23,0:23:66.19:0,66,759	0/0:15,0:15:45.12:0,45,510	1/1:4,16:20:47.95:428,48,0	1/1:1,14:15:42.02:382,42,0	0/0:15,0:15:41.61:0,42,458	1/1:33,0:33:23.03:252,23,0	1/1:24,0:24:58.28:239,58,0	0/0:35,0:35:86.74:0,87,922	0/0:23,0:23:56.36:0,56,618	0/0:36,0:35:78.44:0,78,992	0/0:17,0:17:42.57:0,43,467	0/0:13,0:12:18.05:0,18,208	1/1:3,12:15:36.02:328,36,0	1/1:5,13:18:42.01:383,42,0	1/1:6,12:18:30.01:274,30,0	0/0:35,0:35:93.26:0,93,1057	0/0:13,0:13:30.08:0,30,339	0/0:24,0:24:60.98:0,61,672	0/0:1,0:1:3.01:0,3,35
chr10	52512518	.	GTTTTGTTT	G	5519.50	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=11.648;DP=587;FS=3.456;HRun=0;HaplotypeScore=172.1250;InbreedingCoeff=0.9200;MQ=58.07;MQ0=6;MQRankSum=-9.298;QD=29.05;ReadPosRankSum=0.500;VQSLOD=4.2671;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,16:28:18.60:665,19,0	0/0:8,0:8:15.05:0,15,571	0/0:23,0:12:15.05:0,15,336	0/0:23,0:8:2.59:0,3,25	0/0:31,0:31:75.26:0,75,2803	0/0:26,0:26:57.20:0,57,2156	0/0:16,0:16:27.09:0,27,1022	0/0:31,0:32:51.16:0,51,1598	0/0:16,0:16:42.13:0,42,1558	0/0:28,0:28:78.27:0,78,2874	0/0:13,0:13:24.08:0,24,917	1/1:6,13:19:35.82:881,36,0	1/1:6,12:18:30.57:727,31,0	0/0:16,0:16:45.15:0,45,1652	0/0:32,0:32:75.26:0,75,2822	0/0:28,0:28:66.20:0,66,2480	0/0:34,0:33:78.25:0,78,2677	0/0:25,0:25:66.23:0,66,2547	1/1:23,6:29:18.06:328,18,0	1/1:4,17:21:45.11:885,45,0	1/1:7,0:7:6.02:123,6,0	1/1:6,8:14:30.08:661,30,0	1/1:5,13:18:17.34:395,17,0	1/1:10,3:14:14.97:269,15,0	0/0:32,0:32:69.22:0,69,2587	0/0:13,0:13:30.10:0,30,1058	1/1:8,13:21:24.08:584,24,0	0/0:1,0:1:3.01:0,3,123
chr10	52512526	.	T	TG	581.37	PASS	AB=0.903;AC=8;AF=0.143;AN=56;BaseQRankSum=5.119;DP=574;FS=7.213;HRun=0;HaplotypeScore=110.5643;InbreedingCoeff=-0.1701;MQ=59.32;MQ0=4;MQRankSum=-2.374;QD=4.07;ReadPosRankSum=-3.743;VQSLOD=1.8501;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:34.41:0,34,426	0/0:8,0:8:24.06:0,24,302	0/0:22,0:13:29.20:0,29,309	0/1:23,0:12:18.09:18,0,124	0/0:34,0:34:99:0,102,1387	0/0:26,0:26:75.24:0,75,1033	0/0:12,0:12:36.11:0,36,487	0/0:27,0:27:77.50:0,78,993	0/0:18,0:18:51.17:0,51,712	0/0:30,0:30:90.30:0,90,1258	0/0:12,0:12:33.09:0,33,430	0/0:17,0:17:13.76:0,14,202	0/1:16,0:16:12.50:12,0,118	0/0:16,0:16:48.11:0,48,647	0/0:31,0:31:90.29:0,90,1240	0/0:24,0:24:69.22:0,69,950	0/0:35,0:34:99:0,102,1328	0/0:25,0:25:72.20:0,72,969	0/1:20,0:20:99:149,0,363	0/1:19,0:19:99:160,0,198	0/1:7,4:10:99:128,0,139	0/1:12,5:17:99:102,0,125	0/0:18,0:18:13.81:0,14,295	0/1:11,5:16:99:138,0,264	0/0:30,0:30:90.29:0,90,1229	0/0:16,0:16:45.08:0,45,593	0/1:20,0:20:5.71:6,0,320	0/0:3,0:3:3.01:0,3,42
chr10	52515678	.	TTAAG	T	5729.57	PASS	AB=0.524;AC=7;AF=0.125;AN=56;BaseQRankSum=7.254;DP=753;FS=0.000;HRun=0;HaplotypeScore=131.6185;InbreedingCoeff=0.8363;MQ=88.90;MQ0=0;MQRankSum=-5.387;QD=49.39;ReadPosRankSum=-1.046;VQSLOD=5.2503;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,102,2801	1/1:0,10:10:27.09:539,27,0	0/0:34,0:34:93.31:0,93,2342	0/0:26,0:26:70.79:0,71,1729	0/0:35,0:35:99:0,105,2775	0/0:24,0:24:72.25:0,72,1983	0/0:21,0:21:63.19:0,63,1644	1/1:2,42:44:99:2333,126,0	0/0:30,0:30:90.29:0,90,2417	0/0:21,0:21:60.21:0,60,1655	0/0:18,0:18:54.19:0,54,1499	0/0:30,0:30:90.31:0,90,2500	0/0:31,0:31:93.31:0,93,2518	0/0:22,0:22:66.23:0,66,1828	1/1:2,27:29:75.26:1498,75,0	0/1:3,30:33:89.66:1359,0,90	0/0:43,0:43:99:0,129,3411	0/0:32,0:32:96.31:0,96,2543	0/0:18,0:18:54.19:0,54,1511	0/0:29,0:29:84.29:0,84,2327	0/0:49,0:49:99:0,141,3920	0/0:23,0:23:69.22:0,69,1790	0/0:18,0:18:54.19:0,54,1503	0/0:24,0:24:72.23:0,72,1955	0/0:20,0:20:57.20:0,57,1556	0/0:22,0:22:63.22:0,63,1732	0/0:21,0:21:63.22:0,63,1751	0/0:12,0:12:36.07:0,36,884
chr10	52516813	.	TGTAGAATTTCTCTAGAGGACTGGGA	T	9087.78	PASS	AC=10;AF=0.185;AN=54;BaseQRankSum=10.785;DP=556;FS=3.662;HRun=0;HaplotypeScore=366.3070;InbreedingCoeff=0.9842;MQ=85.57;MQ0=0;MQRankSum=-10.885;QD=116.51;ReadPosRankSum=5.138;VQSLOD=3.7825;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,148,15484	0/0:5,0:5:15.05:0,15,1784	0/0:20,0:20:60.21:0,60,4170	0/0:19,0:19:51.17:0,51,4052	0/0:25,0:25:75.24:0,75,7883	0/0:25,0:25:72.25:0,72,7557	0/0:24,0:24:72.22:0,72,6951	0/0:27,0:27:81.28:0,81,6940	0/0:16,0:16:45.15:0,45,4615	0/0:19,0:19:57.20:0,57,6410	0/0:16,0:16:48.16:0,48,4686	1/1:6,14:20:36.12:2479,36,0	1/1:5,14:19:36.12:2479,36,0	0/0:22,0:22:66.23:0,66,7053	0/0:23,0:23:69.24:0,69,7312	0/0:9,0:9:27.09:0,27,2851	0/0:18,0:18:54.16:0,54,5597	0/0:18,0:18:51.18:0,51,5280	0/0:16,0:16:48.16:0,48,4249	0/0:23,0:23:66.23:0,66,6754	0/0:19,0:19:53.82:0,54,5610	1/1:5,7:12:15.05:1033,15,0	1/1:3,12:15:33.11:2272,33,0	1/1:3,9:12:11.62:826,12,0	0/0:17,0:17:51.18:0,51,5328	0/0:34,0:34:96.33:0,96,10013	0/0:34,0:34:96.33:0,96,9979	./.
chr10	52522877	.	TAC	T	2630.24	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=11.145;DP=353;FS=0.528;HRun=0;HaplotypeScore=47.1660;InbreedingCoeff=0.9525;MQ=80.76;MQ0=1;MQRankSum=-4.989;QD=41.10;ReadPosRankSum=0.106;VQSLOD=5.0345;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:6:18.06:0,18,365	1/1:0,8:8:21.07:321,21,0	0/0:13,0:13:39.09:0,39,750	0/0:7,0:7:17.89:0,18,244	0/0:19,0:19:57.20:0,57,1140	0/0:13,0:13:39.13:0,39,791	0/0:10,0:10:30.10:0,30,600	1/1:1,30:31:90.31:1376,90,0	0/0:10,0:10:30.10:0,30,594	0/0:18,0:18:54.18:0,54,1074	0/0:12,0:12:36.12:0,36,730	0/0:7,0:7:21.07:0,21,423	0/0:13,0:13:39.13:0,39,792	0/0:11,0:11:33.11:0,33,635	1/1:0,11:11:33.11:497,33,0	1/1:0,14:14:39.13:596,39,0	0/0:17,0:17:51.18:0,51,1035	0/0:18,0:18:54.14:0,54,980	0/0:16,0:16:45.15:0,45,874	0/0:8,0:8:24.08:0,24,486	0/0:5,0:5:12.04:0,12,244	0/0:2,0:2:6.02:0,6,122	0/0:8,0:8:24.08:0,24,488	0/0:6,0:6:18.06:0,18,366	0/0:9,0:9:27.09:0,27,549	0/0:31,0:31:93.30:0,93,1818	0/0:20,0:19:60.20:0,60,1176	0/0:9,0:9:27.09:0,27,548
chr10	52523876	.	AAGCAGC	A	715.77	PASS	AB=1.000;AC=11;AF=0.393;AN=28;BaseQRankSum=5.541;DP=543;FS=10.802;HRun=0;HaplotypeScore=131.0935;InbreedingCoeff=0.5879;MQ=73.74;MQ0=6;MQRankSum=-1.559;QD=7.02;ReadPosRankSum=1.814;VQSLOD=2.0235;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	1/1:9,0:9:2.84:14,3,0	./.	./.	./.	./.	0/0:44,0:44:69.20:0,69,1102	./.	0/0:14,0:14:12.04:0,12,222	./.	./.	1/1:19,0:19:11.98:127,12,0	1/1:15,1:17:15:173,15,0	0/0:30,0:30:45.57:0,46,809	0/0:32,0:32:9.77:0,10,135	0/0:29,0:28:1.04:0,1,52	0/0:30,0:30:44.34:0,44,728	0/0:20,0:19:36.08:0,36,678	./.	1/1:9,0:9:3.01:40,3,0	./.	./.	./.	1/1:12,17:30:8.97:142,9,0	0/0:10,0:10:3.01:0,3,56	./.	0/1:18,0:17:13.60:342,0,14	./.
chr10	52523920	.	GCAT	G	65.98	PASS	AB=1.000;AC=8;AF=0.167;AN=48;BaseQRankSum=4.509;DP=450;FS=1.052;HRun=0;HaplotypeScore=80.8882;InbreedingCoeff=0.2117;MQ=41.37;MQ0=39;MQRankSum=-3.571;QD=0.79;ReadPosRankSum=1.600;VQSLOD=1.1569;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:10:1.47:4,1,0	./.	./.	0/0:33,0:1:2.96:0,3,19	0/0:7,0:5:5.98:0,6,47	0/0:10,0:7:11.98:0,12,98	0/0:39,0:39:26.99:0,27,336	0/0:24,0:12:3:0,3,25	1/1:3,14:17:2.89:40,3,0	0/0:12,0:5:5.93:0,6,44	0/0:6,0:3:5.99:0,6,50	0/0:14,0:14:2.94:0,3,18	0/0:10,0:10:3.78:0,4,34	0/0:30,0:30:0.02:0,0,315	0/0:23,0:22:5.95:0,6,64	0/0:26,0:24:2.99:0,3,23	0/0:22,0:21:14.07:0,14,121	0/0:11,0:10:8.99:0,9,99	0/0:17,0:12:11.85:0,12,80	1/1:11,0:9:2.92:17,3,0	0/0:23,0:19:0:0,0,0	./.	./.	0/1:23,0:23:3.20:3,0,8	0/0:13,0:13:3.09:0,3,174	0/0:12,0:10:20.99:0,21,181	0/1:22,0:22:22.21:104,0,22	0/0:1,0:1:2.99:0,3,24
chr10	52523959	.	TCATAGGTG	T	776.68	PASS	AB=1.000;AC=10;AF=0.192;AN=52;BaseQRankSum=5.929;DP=351;FS=1.743;HRun=0;HaplotypeScore=93.9619;InbreedingCoeff=0.1854;MQ=51.95;MQ0=14;MQRankSum=-6.538;QD=7.61;ReadPosRankSum=-0.336;VQSLOD=1.5586;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:3.68:0,4,93	./.	0/0:23,0:10:28.80:0,29,643	0/0:31,0:17:45.76:0,46,1063	0/0:11,0:11:33.11:0,33,1075	0/0:9,0:9:24.08:0,24,839	0/0:33,0:33:75.30:0,75,2884	0/0:5,0:1:2.99:0,3,24	0/1:22,0:22:12.85:13,0,725	0/0:9,0:9:27.01:0,27,766	0/0:4,0:4:9.03:0,9,325	0/0:4,0:4:3.01:0,3,49	0/0:6,0:6:2.99:0,3,39	0/0:26,0:26:75.26:0,75,2314	0/0:13,0:12:0.27:0,0,41	0/1:14,0:13:17.08:33,0,17	0/1:10,0:10:50.51:51,0,117	0/0:5,0:4:2.89:0,3,54	0/1:7,0:6:22.98:134,0,23	1/1:11,4:15:2.98:81,3,0	0/0:3,16:19:1.39:0,1,3	./.	0/1:3,0:2:0:0,0,0	0/1:13,0:13:2.98:3,0,6	0/0:12,0:12:36.12:0,36,1250	0/0:17,0:17:48.14:0,48,1473	1/1:3,15:18:28.53:591,29,0	0/0:7,0:7:21.07:0,21,625
chr10	52523962	.	TAGGTGAGG	T	793.84	PASS	AB=0.805;AC=14;AF=0.292;AN=48;BaseQRankSum=5.453;DP=338;FS=0.000;HRun=0;HaplotypeScore=93.5259;InbreedingCoeff=0.3778;MQ=54.50;MQ0=13;MQRankSum=-5.555;QD=9.23;ReadPosRankSum=-0.004;VQSLOD=1.1532;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:1,2:11:5.41:0,5,57	./.	0/0:25,0:12:33.27:0,33,710	0/0:31,0:17:44.40:0,44,1339	0/0:11,0:11:33.11:0,33,1386	0/0:8,1:9:24.08:0,24,1092	0/0:33,0:33:96.26:0,96,3780	./.	0/0:22,0:22:27.09:0,27,1139	0/0:9,0:9:27.09:0,27,1026	0/0:6,0:6:15.05:0,15,608	0/0:3,1:4:2.90:0,3,16	0/1:5,0:5:5.89:45,0,6	0/0:27,0:27:78.27:0,78,3216	1/1:3,7:9:3.01:56,3,0	1/1:0,10:10:3.01:91,3,0	0/1:3,5:9:11.86:211,0,12	1/1:3,0:3:6.01:82,6,0	0/1:3,0:5:36.62:37,0,37	1/1:15,0:15:1.69:23,2,0	0/0:19,0:19:2.51:0,3,11	./.	./.	0/1:9,1:10:27.34:27,0,46	0/0:12,0:12:36.12:0,36,1583	0/0:17,0:17:48.14:0,48,1967	1/1:15,2:17:6.27:367,6,0	0/0:7,0:7:21.07:0,21,874
chr10	52523965	.	GTGAGGCATCATCATCATCATCATCATCATCATCAT	G	980.36	PASS	AB=1.000;AC=16;AF=0.333;AN=48;BaseQRankSum=4.551;DP=342;FS=2.009;HRun=0;HaplotypeScore=219.2113;InbreedingCoeff=0.5450;MQ=54.37;MQ0=14;MQRankSum=-6.318;QD=9.90;ReadPosRankSum=-0.637;VQSLOD=2.7333;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:11:5.68:26,6,0	./.	0/0:29,0:12:30.17:0,30,660	0/0:34,0:17:45.12:0,45,974	0/0:11,0:11:33.11:0,33,1796	0/0:10,0:10:27.09:0,27,1403	0/0:33,0:33:90.31:0,90,4147	./.	0/0:20,0:20:24.08:0,24,1903	0/0:11,0:11:33.11:0,33,1475	0/0:6,0:6:15.05:0,15,847	0/0:4,0:4:3.01:0,3,91	0/0:3,0:3:3.01:0,3,45	0/0:29,0:29:84.27:0,84,4869	0/0:9,0:9:3:0,3,26	1/1:10,0:10:3.01:39,3,0	0/1:9,0:9:56.69:57,0,114	0/1:5,0:4:40.69:41,0,55	1/1:4,0:3:9.03:186,9,0	1/1:4,12:16:5.75:101,6,0	1/1:19,0:19:0.47:1,0,0	./.	./.	1/1:8,0:8:0.89:2,1,0	0/0:12,0:12:36.12:0,36,1901	0/0:18,0:18:54.19:0,54,3412	1/1:17,0:17:23.19:677,23,0	0/0:7,0:7:21.07:0,21,1281
chr10	52523970	.	GCAT	G	48.23	PASS	AB=0.920;AC=9;AF=0.225;AN=40;BaseQRankSum=2.879;DP=393;FS=13.737;HRun=0;HaplotypeScore=95.4430;InbreedingCoeff=0.1205;MQ=53.00;MQ0=13;MQRankSum=-0.495;QD=0.45;ReadPosRankSum=0.122;VQSLOD=1.0874;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:17:6.16:0,6,42	./.	./.	./.	0/1:12,0:12:26.08:26,0,156	0/0:11,0:11:15.05:0,15,281	0/1:33,1:34:11.02:11,0,411	./.	0/0:21,0:21:24.08:0,24,449	0/1:12,1:13:20.08:20,0,226	0/1:4,3:7:64.20:64,0,100	./.	1/1:10,1:11:2.99:25,3,0	0/0:32,0:32:14.85:0,15,834	0/0:17,0:17:2.63:0,3,23	0/0:13,0:13:3:0,3,25	0/0:12,0:12:3.45:0,3,24	0/0:7,0:6:2.99:0,3,23	./.	./.	0/0:21,0:21:0.89:0,1,2	./.	0/0:4,0:2:0:0,0,0	0/1:12,0:12:0:1,0,0	0/0:13,0:13:6.02:0,6,112	0/0:18,0:18:21.06:0,21,359	1/1:18,0:18:4.19:11,4,0	0/0:7,0:7:15.05:0,15,279
chr10	52524000	.	T	TAGG	1615.80	PASS	AB=0.833;AC=9;AF=0.161;AN=56;BaseQRankSum=-2.001;DP=464;FS=1.428;HRun=0;HaplotypeScore=105.2952;InbreedingCoeff=0.7581;MQ=48.41;MQ0=32;MQRankSum=-4.173;QD=17.01;ReadPosRankSum=-2.907;VQSLOD=2.9436;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:16,4:19:15.65:400,0,16	0/0:6,0:6:15.05:0,15,279	0/0:12,0:1:3.01:0,3,54	0/0:20,0:7:19.02:0,19,212	0/0:14,0:14:39.13:0,39,701	0/0:14,0:14:36.12:0,36,670	0/0:39,0:39:99:0,108,1949	0/0:24,0:9:24.08:0,24,436	0/0:16,0:16:36.12:0,36,669	0/0:18,0:18:54.18:0,54,980	0/0:13,0:13:36.12:0,36,613	0/0:13,0:13:26.94:0,27,500	0/0:15,0:15:20.92:0,21,375	0/0:31,0:31:93.32:0,93,1712	0/0:21,0:21:41.91:0,42,778	0/0:10,0:10:21.07:0,21,389	0/0:11,0:11:16.50:0,17,276	0/0:10,0:9:18.97:0,19,257	1/1:2,12:13:32.92:640,33,0	1/1:16,0:16:4.26:41,4,0	1/1:16,4:20:13.76:206,14,0	0/0:7,0:5:12.04:0,12,223	0/0:11,0:8:17.77:0,18,332	0/0:18,0:17:11.98:0,12,223	0/0:15,0:15:42.14:0,42,779	0/0:19,0:18:54.19:0,54,1006	1/1:14,10:24:18.43:484,18,0	0/0:11,0:10:30.10:0,30,549
chr10	52525841	.	A	AT	2638.07	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-10.160;DP=668;FS=3.574;HRun=2;HaplotypeScore=62.2585;InbreedingCoeff=0.9865;MQ=73.53;MQ0=0;MQRankSum=0.278;QD=31.78;ReadPosRankSum=-0.810;VQSLOD=3.0488;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,111,1300	0/0:9,0:9:27.06:0,27,319	0/0:14,0:14:11.96:0,12,407	0/0:7,0:7:15.05:0,15,185	0/0:30,0:30:84.18:0,84,995	0/0:19,0:19:54.15:0,54,655	0/0:30,0:30:87.23:0,87,1038	0/0:48,0:48:99:0,141,1717	0/0:23,0:23:69.20:0,69,832	0/0:32,0:32:93.26:0,93,1129	0/0:27,0:27:78.22:0,78,944	0/0:22,0:22:57.17:0,57,695	0/0:32,0:32:96.30:0,96,1189	0/0:34,0:34:99:0,99,1189	0/0:33,0:33:99:0,99,1216	0/0:35,0:35:99:0,102,1239	0/0:15,0:15:42.12:0,42,507	0/0:16,0:16:45.09:0,45,517	1/1:5,15:20:45.14:631,45,0	1/1:1,28:29:78.22:1089,78,0	1/1:3,12:15:30.10:432,30,0	0/0:21,0:21:54.05:0,54,632	0/0:20,0:20:54.17:0,54,669	0/0:22,0:22:63.19:0,63,768	0/0:26,0:26:75.24:0,75,929	0/0:21,0:20:57.17:0,57,697	1/1:0,19:19:45.15:648,45,0	0/0:11,0:11:33.06:0,33,354
chr10	52527035	.	AG	A	3866.83	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=11.223;DP=708;FS=0.403;HRun=1;HaplotypeScore=65.4785;InbreedingCoeff=0.9976;MQ=84.54;MQ0=1;MQRankSum=-2.170;QD=38.67;ReadPosRankSum=0.968;VQSLOD=4.2002;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:38:99:0,117,1847	1/1:0,9:9:21.07:294,21,0	0/0:22,0:22:63.13:0,63,973	0/0:28,0:27:75.05:0,75,1119	0/0:27,0:27:81.28:0,81,1294	0/0:17,0:17:51.17:0,51,813	0/0:30,0:30:90.29:0,90,1413	1/1:0,33:33:99:1350,99,0	0/0:25,0:25:75.26:0,75,1199	0/0:25,0:25:75.25:0,75,1178	0/0:17,0:17:51.17:0,51,815	0/0:27,0:27:81.24:0,81,1247	0/0:34,0:34:99:0,102,1605	0/0:25,0:25:75.26:0,75,1190	1/1:0,32:32:90.30:1259,90,0	1/1:0,26:26:69.23:965,69,0	0/0:20,0:20:54.17:0,54,837	0/0:24,0:24:69.21:0,69,1072	0/0:24,0:23:66.22:0,66,1035	0/0:27,0:27:81.28:0,81,1292	0/0:36,0:36:99:0,108,1702	0/0:11,0:11:33.11:0,33,528	0/0:12,0:12:36.11:0,36,549	0/0:35,0:35:99:0,105,1626	0/0:29,0:29:84.27:0,84,1318	0/0:27,0:27:81.28:0,81,1287	0/0:40,0:40:99:0,114,1822	0/0:7,0:7:21.07:0,21,336
chr10	52528059	.	A	ATAT	5906.99	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-8.843;DP=823;FS=18.657;HRun=0;HaplotypeScore=127.7800;InbreedingCoeff=0.9989;MQ=84.06;MQ0=0;MQRankSum=-7.885;QD=55.21;ReadPosRankSum=-1.733;VQSLOD=4.5778;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:23:51.17:0,51,836	1/1:2,11:13:27.05:564,27,0	0/0:30,0:29:75.26:0,75,1219	0/0:28,0:29:22.58:0,23,1043	0/0:21,0:21:60.18:0,60,968	0/0:42,0:42:99:0,123,1995	0/0:38,0:38:99:0,108,1755	1/1:5,27:34:96.26:1997,96,0	0/0:26,0:26:78.27:0,78,1287	0/0:39,0:39:99:0,105,1736	0/0:20,0:20:51.17:0,51,850	0/0:28,0:28:72.23:0,72,1174	0/0:38,0:38:96.33:0,96,1595	0/0:32,0:32:96.33:0,96,1599	1/1:1,33:34:90.26:1989,90,0	1/1:1,23:25:60.21:1358,60,0	0/0:27,0:27:72.25:0,72,1178	0/0:32,0:32:87.30:0,87,1427	0/0:28,0:28:69.22:0,69,1097	0/0:33,0:33:87.28:0,87,1422	0/0:55,0:55:99:0,144,2299	0/0:24,0:24:63.21:0,63,1037	0/0:16,0:16:39.13:0,39,649	0/0:31,0:31:75.03:0,75,1170	0/0:25,0:25:72.25:0,72,1187	0/0:35,0:35:99:0,99,1648	0/0:26,0:26:72.25:0,72,1199	0/0:16,0:16:39.13:0,39,650
chr10	52528127	.	C	CTGTG	7368.94	PASS	AB=0.871;AC=27;AF=0.482;AN=56;BaseQRankSum=-5.085;DP=898;FS=0.000;HRun=0;HaplotypeScore=182.2772;InbreedingCoeff=0.7183;MQ=63.52;MQ0=10;MQRankSum=0.006;QD=14.65;ReadPosRankSum=0.599;VQSLOD=3.9493;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:26:11.78:126,12,0	1/1:12,0:12:1.98:6,2,0	0/1:43,0:29:17.09:17,0,38	0/0:40,0:26:7.08:0,7,101	0/0:19,0:21:53.44:0,53,678	0/0:30,0:30:29.99:0,30,385	0/0:35,0:36:66.16:0,66,925	1/1:29,0:28:8.30:90,8,0	0/0:29,0:30:55.88:0,56,773	0/0:33,0:33:60.11:0,60,841	0/0:18,0:22:36.07:0,36,506	1/1:19,13:37:32.42:644,32,0	1/1:13,18:37:38.59:814,39,0	0/0:25,0:28:57.10:0,57,786	1/1:28,0:28:5.27:91,5,0	0/1:23,0:23:32.18:49,0,32	0/0:34,0:35:69.21:0,69,1062	0/0:21,0:23:31.88:0,32,447	1/1:24,16:41:41.24:827,41,0	1/1:17,3:20:18.25:295,18,0	1/1:31,40:77:50.16:997,50,0	1/1:11,17:30:36.04:875,36,0	0/1:9,9:21:99:308,0,117	1/1:28,17:48:95.25:1741,95,0	0/0:29,0:33:74.95:0,75,1038	0/0:41,0:40:52.02:0,52,622	1/1:13,12:27:23.11:488,23,0	0/0:21,0:22:47.68:0,48,606
chr10	52528152	.	C	CGT	880.11	PASS	AB=0.948;AC=9;AF=0.161;AN=56;BaseQRankSum=2.694;DP=875;FS=45.646;HRun=0;HaplotypeScore=190.4714;InbreedingCoeff=0.4646;MQ=56.18;MQ0=12;MQRankSum=2.552;QD=6.67;ReadPosRankSum=-3.943;VQSLOD=0.9698;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:11.93:0,12,93	1/1:9,2:11:6.49:96,6,0	0/0:50,0:23:33.99:0,34,349	0/0:44,0:24:17.96:0,18,348	0/0:26,0:27:57.65:0,58,604	0/0:22,0:22:48.12:0,48,558	0/0:37,0:37:80.19:0,80,933	1/1:11,14:23:3.19:470,3,0	0/0:26,0:26:42.12:0,42,503	0/0:29,0:29:48.43:0,48,521	0/0:21,0:21:36.10:0,36,424	0/0:31,0:31:25.51:0,26,190	0/0:40,0:39:29.23:0,29,302	0/0:31,0:31:69.14:0,69,793	0/1:22,5:27:47.69:209,0,48	1/1:20,3:23:15.01:193,15,0	0/0:34,0:34:75.20:0,75,893	0/0:20,0:20:41.44:0,41,457	0/1:23,0:22:43.05:43,0,193	0/0:19,0:19:20.21:0,20,212	0/0:81,0:78:42.12:0,42,614	0/0:28,0:29:36.77:0,37,266	0/0:18,0:19:0.34:0,0,218	0/0:56,0:55:34.49:0,34,456	0/0:35,0:36:80.09:0,80,909	0/0:33,0:31:65.88:0,66,701	0/1:22,0:23:10.33:10,0,170	0/0:21,0:20:28.13:0,28,409
chr10	52528196	.	CTGTG	C	1667.17	PASS	AB=0.844;AC=24;AF=0.429;AN=56;BaseQRankSum=8.595;DP=756;FS=1.059;HRun=0;HaplotypeScore=202.4173;InbreedingCoeff=0.2655;MQ=55.65;MQ0=12;MQRankSum=-5.062;QD=3.76;ReadPosRankSum=-0.282;VQSLOD=2.5540;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:15.32:0,15,113	1/1:6,0:10:7.24:80,7,0	0/0:37,0:16:0.89:0,1,2	0/0:35,0:16:3.01:0,3,57	0/1:29,1:31:7.94:8,0,493	0/0:24,0:22:20.26:0,20,218	0/1:37,0:39:11.96:12,0,531	0/0:31,0:30:8.19:0,8,53	0/0:19,0:19:26.49:0,26,367	0/1:27,0:25:5.45:5,0,717	0/0:17,0:17:13.78:0,14,296	1/1:17,0:26:18.12:184,18,0	1/1:28,0:30:13.72:114,14,0	0/0:27,0:27:41.88:0,42,723	0/1:16,0:26:26.90:182,0,27	0/1:12,0:22:28.66:239,0,29	1/1:18,16:33:10.12:274,10,0	0/1:12,10:23:15.75:175,0,16	1/1:8,0:12:12.01:112,12,0	0/1:13,0:16:5.83:99,0,6	0/1:58,0:58:13.07:13,0,75	1/1:17,0:22:10.99:140,11,0	1/1:11,0:14:15.04:109,15,0	0/1:31,0:34:4.46:4,0,28	0/0:30,0:31:32:0,32,406	0/0:25,0:25:32.96:0,33,447	0/1:11,0:15:4.62:100,0,5	0/0:15,0:15:17.80:0,18,357
chr10	52528279	.	C	CTG	1136.94	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.923;DP=792;FS=3.504;HRun=0;HaplotypeScore=160.3959;InbreedingCoeff=0.8474;MQ=66.55;MQ0=8;MQRankSum=-2.033;QD=26.44;ReadPosRankSum=-1.046;VQSLOD=4.4513;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,34:43:44.35:1232,44,0	0/0:7,0:7:3.01:0,3,37	0/0:43,0:38:62.57:0,63,852	0/0:33,0:26:45.11:0,45,528	0/0:16,0:16:36.11:0,36,443	0/0:14,0:15:38.94:0,39,444	0/0:30,0:32:74.90:0,75,877	0/0:32,0:31:69.21:0,69,834	0/0:28,0:28:63.19:0,63,773	0/0:30,0:29:72.22:0,72,877	0/0:15,0:15:36.11:0,36,443	0/0:38,0:37:93.26:0,93,1118	0/0:25,0:25:66.18:0,66,786	0/0:25,0:25:63.03:0,63,751	0/0:29,0:22:39.12:0,39,478	0/0:35,0:34:39.11:0,39,480	0/0:32,0:32:57.16:0,57,688	0/0:22,0:24:47.96:0,48,553	0/0:23,0:25:38.77:0,39,423	0/0:30,0:31:66.02:0,66,776	0/0:57,0:56:99:0,114,1376	0/0:27,0:27:57.15:0,57,676	0/0:25,0:25:51.16:0,51,628	0/0:39,0:40:87.03:0,87,1042	0/0:19,0:19:54.17:0,54,665	0/0:34,0:35:58.74:0,59,847	0/0:18,0:19:47.98:0,48,568	0/0:9,0:10:20.90:0,21,235
chr10	52528322	.	CTGTGTGTGTGTATGGTGTGTGTGTGTG	C	1598.24	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=3.228;DP=750;FS=1.910;HRun=0;HaplotypeScore=404.5537;InbreedingCoeff=0.8591;MQ=53.51;MQ0=38;MQRankSum=-3.609;QD=20.23;ReadPosRankSum=-3.953;VQSLOD=0.2303;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:39:57.60:0,58,2412	1/1:1,4:5:4.57:216,5,0	0/0:43,0:12:14.17:0,14,360	0/0:57,0:19:41.18:0,41,965	0/0:8,0:8:15.05:0,15,616	0/0:18,0:18:38.78:0,39,2636	0/0:28,0:27:58.90:0,59,2357	1/1:28,0:22:6.76:177,7,0	0/0:25,0:25:60.21:0,60,3847	0/0:22,0:21:43.03:0,43,2775	0/0:14,0:14:27.09:0,27,1674	0/0:41,0:40:89.25:0,89,3001	0/0:29,0:29:45.12:0,45,1435	0/0:38,0:37:77.89:0,78,4222	1/1:20,3:15:30.04:1129,30,0	1/1:7,13:18:2.51:212,3,0	0/0:30,0:30:78.25:0,78,5224	0/0:18,0:18:42.12:0,42,2382	0/0:22,0:18:38.90:0,39,758	0/0:23,0:23:54.64:0,55,2752	0/0:65,0:62:89.79:0,90,6624	0/0:15,0:14:27.06:0,27,841	0/0:20,0:20:45.14:0,45,1469	0/0:37,0:37:58.28:0,58,2053	0/0:17,0:17:36.11:0,36,1724	0/0:28,0:28:60.12:0,60,1905	0/0:25,0:25:51.16:0,51,3460	0/0:7,0:7:15.05:0,15,309
chr10	52528333	.	TATG	T	432.56	PASS	AB=0.895;AC=9;AF=0.161;AN=56;BaseQRankSum=3.935;DP=737;FS=0.800;HRun=0;HaplotypeScore=132.0371;InbreedingCoeff=0.7684;MQ=51.52;MQ0=47;MQRankSum=-3.504;QD=5.48;ReadPosRankSum=-4.099;VQSLOD=1.4596;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:41,3:42:60.18:0,60,1034	1/1:5,0:5:4.55:30,5,0	0/0:35,0:8:17.18:0,17,318	0/0:50,0:16:40.93:0,41,652	0/0:10,0:10:15.05:0,15,329	0/0:19,0:19:49.95:0,50,803	0/0:29,0:28:66.01:0,66,1183	1/1:8,9:10:15.02:239,15,0	0/0:27,0:27:68.97:0,69,1334	0/0:24,0:24:57.03:0,57,1001	0/0:13,0:13:33.10:0,33,630	0/0:38,0:37:88.19:0,88,1489	0/0:29,0:27:47.83:0,48,828	0/0:40,0:38:76.67:0,77,1512	1/1:23,2:14:29.94:274,30,0	1/1:15,0:13:2.69:26,3,0	0/0:30,0:30:84.02:0,84,1516	0/1:15,2:17:9.53:10,0,769	0/0:20,0:20:12.43:0,12,748	0/0:22,1:22:56.90:0,57,1166	0/0:60,5:62:82.75:0,83,2502	0/0:16,0:15:26.76:0,27,500	0/0:16,0:15:45.14:0,45,912	0/0:41,0:41:59.95:0,60,1178	0/0:15,0:14:38.93:0,39,766	0/0:30,1:28:29.01:0,29,1299	0/0:26,0:26:64.67:0,65,1143	0/0:16,0:16:32.04:0,32,610
chr10	52528336	.	GGTGTGTGTGTGT	G	1044.75	PASS	AC=14;AF=0.280;AN=50;BaseQRankSum=5.244;DP=750;FS=5.102;HRun=0;HaplotypeScore=221.2979;InbreedingCoeff=0.7780;MQ=50.85;MQ0=49;MQRankSum=-3.497;QD=6.18;ReadPosRankSum=-0.603;VQSLOD=2.4136;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:42:23.36:0,23,613	1/1:4,0:5:4.57:88,5,0	./.	./.	0/0:11,0:11:3.01:0,3,175	0/0:18,0:19:36.12:0,36,1586	0/0:25,0:27:19.42:0,19,649	0/0:17,0:12:6.02:0,6,109	0/0:24,0:28:39.13:0,39,1702	0/0:26,0:26:48.63:0,49,1734	0/0:12,0:13:18.06:0,18,522	1/1:30,7:38:14.98:391,15,0	1/1:18,10:25:2.81:102,3,0	0/0:38,0:43:29.81:0,30,1181	1/1:16,0:10:15.05:411,15,0	1/1:14,0:13:3.01:84,3,0	0/0:29,0:30:48.08:0,48,1667	0/0:17,0:17:20.43:0,20,755	0/0:15,0:15:11.40:0,11,289	0/0:24,0:23:24.55:0,25,1004	0/0:70,0:66:61.45:0,61,2550	1/1:18,0:17:6.02:103,6,0	./.	1/1:30,13:43:3.92:25,4,0	0/0:17,0:16:18.05:0,18,682	0/0:35,0:32:35.22:0,35,1191	0/0:24,0:24:45.15:0,45,1880	0/0:12,0:16:21.07:0,21,911
chr10	52529870	.	ACC	A	671.61	PASS	AB=0.646;AC=3;AF=0.054;AN=56;BaseQRankSum=4.916;DP=694;FS=6.158;HRun=3;HaplotypeScore=96.9298;InbreedingCoeff=-0.0589;MQ=56.22;MQ0=28;MQRankSum=1.588;QD=14.60;ReadPosRankSum=-2.065;VQSLOD=-0.1082;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:23:54.18:0,54,1005	0/0:6,0:6:15.04:0,15,248	0/0:27,0:8:21.07:0,21,364	0/0:33,0:14:36.09:0,36,585	0/0:18,0:18:51.17:0,51,971	0/0:16,0:16:45.13:0,45,791	0/0:33,0:33:96.33:0,96,1811	0/1:8,5:11:99:202,0,182	0/0:28,0:28:77.94:0,78,1430	0/0:25,0:23:69.22:0,69,1291	0/0:5,0:5:12.04:0,12,232	0/0:40,0:40:99:0,114,2156	0/0:22,0:21:63.19:0,63,1139	0/0:43,0:43:99:0,126,2363	0/1:6,15:21:99:370,0,240	0/1:5,7:12:99:200,0,221	0/0:22,0:21:57.20:0,57,1100	0/0:27,0:27:78.27:0,78,1487	0/0:15,0:12:36.12:0,36,648	0/0:15,0:15:45.15:0,45,856	0/0:104,0:100:99:0,262,4734	0/0:25,0:25:72.20:0,72,1339	0/0:8,0:8:24.05:0,24,396	0/0:41,0:41:99:0,111,2111	0/0:18,0:18:54.19:0,54,1034	0/0:28,0:27:75.24:0,75,1410	0/0:14,0:14:36.11:0,36,662	0/0:6,0:6:18.06:0,18,347
chr10	52531148	.	A	AC	909.38	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.873;DP=535;FS=7.487;HRun=1;HaplotypeScore=78.1542;InbreedingCoeff=0.9943;MQ=74.78;MQ0=0;MQRankSum=-3.285;QD=30.31;ReadPosRankSum=2.049;VQSLOD=2.9123;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,27:30:63.21:1004,63,0	0/0:8,0:8:24.07:0,24,319	0/0:13,0:13:36.09:0,36,462	0/0:27,0:27:61.95:0,62,913	0/0:13,0:13:39.12:0,39,528	0/0:20,0:20:60.20:0,60,837	0/0:12,0:12:36.12:0,36,504	0/0:36,0:36:99:0,99,1334	0/0:12,0:12:36.12:0,36,504	0/0:19,0:19:57.18:0,57,780	0/0:17,0:17:48.16:0,48,671	0/0:19,0:19:57.19:0,57,797	0/0:9,0:9:27.08:0,27,361	0/0:20,0:20:60.20:0,60,838	0/0:14,0:14:42.13:0,42,570	0/0:16,0:16:48.15:0,48,656	0/0:31,0:31:90.26:0,90,1220	0/0:12,0:12:36.12:0,36,504	0/0:18,0:18:51.17:0,51,709	0/0:18,0:18:54.18:0,54,753	0/0:54,0:54:99:0,160,2207	0/0:10,0:10:30.10:0,30,420	0/0:11,0:11:30.10:0,30,420	0/0:21,0:21:57.19:0,57,797	0/0:21,0:21:60.20:0,60,837	0/0:27,0:27:75.25:0,75,1049	0/0:18,0:18:54.18:0,54,755	0/0:9,0:9:27.09:0,27,378
chr10	52532200	.	GACACTACC	G	1357.11	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.338;DP=834;FS=0.878;HRun=0;HaplotypeScore=219.2779;InbreedingCoeff=0.9998;MQ=95.58;MQ0=0;MQRankSum=-4.501;QD=56.55;ReadPosRankSum=-2.223;VQSLOD=3.0000;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,132,5659	0/0:21,0:21:60.21:0,60,2436	0/0:41,0:41:99:0,117,4444	0/0:39,0:39:99:0,103,4075	0/0:29,0:29:78.24:0,78,3180	0/0:20,0:20:60.21:0,60,2460	0/0:28,0:28:81.28:0,81,3348	1/1:3,21:24:57.20:1452,57,0	0/0:15,0:15:42.14:0,42,1654	0/0:26,0:26:75.26:0,75,3258	0/0:15,0:15:45.15:0,45,1906	0/0:42,0:42:99:0,117,4925	0/0:32,0:32:90.31:0,90,3840	0/0:32,0:32:90.31:0,90,3535	0/0:30,0:30:87.30:0,87,3633	0/0:41,0:41:99:0,120,5103	0/0:43,0:43:99:0,126,5265	0/0:17,0:17:51.18:0,51,2111	0/0:28,0:28:78.26:0,78,3061	0/0:30,0:30:81.26:0,81,3217	0/0:45,0:45:99:0,132,5673	0/0:28,0:28:81.28:0,81,3376	0/0:24,0:24:66.23:0,66,2926	0/0:38,0:38:99:0,114,4682	0/0:32,0:31:96.32:0,96,3971	0/0:27,0:27:78.27:0,78,3414	0/0:30,0:30:90.31:0,90,3798	0/0:12,0:12:36.12:0,36,1595
chr10	52534962	.	CA	C	521.14	PASS	AB=0.782;AC=9;AF=0.161;AN=56;BaseQRankSum=-0.401;DP=585;FS=23.599;HRun=15;HaplotypeScore=116.2330;InbreedingCoeff=0.2548;MQ=74.96;MQ0=3;MQRankSum=3.101;QD=3.22;ReadPosRankSum=5.662;VQSLOD=-0.5645;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:19:20.16:0,20,100	0/0:9,0:9:19.65:0,20,104	0/1:33,0:22:13.28:13,0,91	0/0:18,0:16:19.75:0,20,124	0/0:24,0:25:9.15:0,9,284	0/1:15,6:21:26.25:26,0,261	0/0:18,0:18:10.18:0,10,218	0/0:29,0:37:53.82:0,54,286	0/0:26,2:28:15.80:0,16,355	0/0:26,0:27:42.07:0,42,348	0/0:18,0:20:35.59:0,36,284	0/0:10,0:8:11.53:0,12,80	0/0:16,0:16:28.49:0,28,181	0/0:20,0:20:29.89:0,30,241	0/0:24,0:23:39.25:0,39,220	0/0:30,0:29:44.13:0,44,256	0/1:7,2:9:19.18:19,0,77	0/0:15,1:16:19.50:0,20,268	0/1:11,8:19:24.07:112,0,24	1/1:13,20:36:5.65:236,6,0	1/1:6,5:11:14.71:96,15,0	0/0:17,0:15:8.80:0,9,31	0/0:12,0:11:23.78:0,24,128	0/0:9,0:8:7.75:0,8,36	0/0:18,0:20:23.66:0,24,175	0/0:25,0:26:35.29:0,35,372	0/1:12,19:33:20.83:161,0,21	0/0:20,2:22:18.25:0,18,384
chr10	52535305	.	GACACACACACAC	G	6265.42	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=6.853;DP=596;FS=0.485;HRun=0;HaplotypeScore=186.1121;InbreedingCoeff=0.9554;MQ=60.77;MQ0=14;MQRankSum=-6.552;QD=36.43;ReadPosRankSum=-0.301;VQSLOD=4.4630;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:27:33.11:0,33,515	1/1:1,6:7:6.02:211,6,0	0/0:39,0:16:21.06:0,21,642	0/0:34,0:18:14.41:0,14,308	0/0:19,0:22:54.19:0,54,2731	0/0:33,0:36:78.25:0,78,3813	0/0:18,0:19:40.67:0,41,1613	1/1:10,21:31:63.20:1182,63,0	0/0:18,0:18:36.12:0,36,1777	0/0:20,0:20:30.10:0,30,1581	0/0:21,0:22:45.15:0,45,2215	1/1:5,22:27:30.10:949,30,0	1/1:3,17:20:25.33:849,25,0	0/0:13,0:15:36.12:0,36,1940	1/1:9,23:32:45.15:1463,45,0	1/1:3,9:13:18.06:584,18,0	0/0:10,0:17:24.08:0,24,573	0/0:6,0:14:21.07:0,21,523	0/0:4,0:13:36.12:0,36,993	0/0:10,0:30:51.16:0,51,1758	0/0:8,0:12:20.96:0,21,645	1/1:0,6:6:9.03:317,9,0	1/1:4,12:16:15.05:391,15,0	1/1:7,13:20:9.03:318,9,0	0/0:7,0:18:30.10:0,30,1039	0/0:18,0:19:39.13:0,39,2065	0/0:7,0:25:36.12:0,36,1250	0/0:18,0:20:45.15:0,45,2541
chr10	52536430	.	CACT	C	12184.58	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=14.590;DP=846;FS=0.566;HRun=0;HaplotypeScore=129.8949;InbreedingCoeff=0.9987;MQ=85.44;MQ0=0;MQRankSum=-5.097;QD=46.51;ReadPosRankSum=-0.684;VQSLOD=6.4445;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,132,2997	1/1:2,5:7:18.06:307,18,0	0/0:32,0:32:78.18:0,78,1652	0/0:25,0:25:66.11:0,66,1235	0/0:50,0:50:99:0,151,3454	0/0:23,0:23:60.21:0,60,1325	0/0:30,0:30:87.30:0,87,1967	1/1:0,46:46:99:2297,138,0	0/0:39,0:39:99:0,114,2538	0/0:30,0:29:87.30:0,87,2005	0/0:25,0:25:75.25:0,75,1668	1/1:2,31:33:93.28:1553,93,0	1/1:4,27:31:90.31:1533,90,0	0/0:23,0:23:69.24:0,69,1587	1/1:7,38:45:99:2106,129,0	1/1:5,35:40:99:1917,114,0	0/0:28,0:28:78.25:0,78,1754	0/0:23,0:23:69.24:0,69,1578	0/0:29,0:29:87.30:0,87,1946	0/0:33,0:33:99:0,99,2265	0/0:30,0:30:78.25:0,78,1708	1/1:3,14:17:48.15:791,48,0	1/1:3,10:13:33.05:504,33,0	1/1:4,26:30:69.24:1176,69,0	0/0:33,0:33:96.33:0,96,2213	0/0:37,0:37:99:0,108,2417	0/0:33,0:33:93.32:0,93,2070	0/0:13,0:13:39.13:0,39,899
chr10	52536517	.	CTCG	C	17829.40	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=20.345;DP=859;FS=2.073;HRun=0;HaplotypeScore=151.6686;InbreedingCoeff=0.9800;MQ=75.65;MQ0=0;MQRankSum=-7.011;QD=40.25;ReadPosRankSum=2.618;VQSLOD=5.6753;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:47,0:47:85.26:1089,85,0	1/1:1,14:15:42.14:740,42,0	0/0:22,0:22:66.22:0,66,1377	0/0:21,0:21:59.81:0,60,972	0/0:39,0:39:99:0,117,2667	0/0:25,0:25:72.20:0,72,1646	0/0:40,0:40:99:0,120,2788	1/1:1,28:29:78.27:1356,78,0	0/0:47,0:47:99:0,138,3168	0/0:33,0:33:99:0,99,2233	0/0:32,0:32:93.32:0,93,2182	1/1:0,41:41:99:2062,117,0	1/1:1,34:35:99:1761,102,0	0/0:38,0:38:99:0,114,2642	1/1:6,46:52:99:2468,147,0	1/1:2,59:61:99:2823,101,0	0/0:33,0:33:96.33:0,96,2268	0/0:21,0:21:63.15:0,63,1389	1/1:20,0:20:4.12:434,4,0	1/1:22,0:22:63.15:684,63,0	1/1:27,0:27:48.11:512,48,0	1/1:0,20:20:60.12:992,60,0	1/1:0,22:22:63.13:1045,63,0	1/1:2,28:30:78.27:1375,78,0	0/0:17,0:16:51.18:0,51,1200	0/0:37,0:37:75.47:0,75,2392	1/1:22,0:22:45.06:487,45,0	0/0:11,0:11:33.09:0,33,731
chr10	52536519	.	CGTT	C	13306.54	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=20.998;DP=851;FS=2.826;HRun=0;HaplotypeScore=165.6174;InbreedingCoeff=0.9999;MQ=76.33;MQ0=0;MQRankSum=-5.903;QD=30.80;ReadPosRankSum=2.933;VQSLOD=5.4539;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,46:47:99:1796,102,0	1/1:15,0:15:42.06:420,42,0	0/0:23,0:23:69.14:0,69,1422	0/0:21,0:21:51.51:0,52,887	0/0:40,0:40:99:0,117,2635	0/0:24,0:24:69.24:0,69,1631	0/0:41,0:41:99:0,123,2794	1/1:28,0:27:78.06:777,78,0	0/0:46,0:46:99:0,135,3189	0/0:33,0:33:93.32:0,93,2183	0/0:32,0:32:96.33:0,96,2228	1/1:41,0:41:99:1157,117,0	1/1:34,0:34:99:1000,99,0	0/0:37,0:37:99:0,111,2601	1/1:49,0:49:99:1263,135,0	1/1:61,0:61:97.09:1488,97,0	0/0:33,0:33:99:0,99,2315	0/0:21,0:21:57.20:0,57,1347	1/1:1,17:18:31.13:822,31,0	1/1:1,21:22:63.22:1107,63,0	1/1:1,25:26:48.16:845,48,0	1/1:20,0:20:54.04:517,54,0	1/1:22,0:22:57.06:566,57,0	1/1:29,0:29:78.56:759,79,0	0/0:20,0:19:60.21:0,60,1408	0/0:36,1:37:58.51:0,59,2437	1/1:0,20:20:45.11:789,45,0	0/0:11,0:11:30.10:0,30,709
chr10	52536751	.	G	GCA	15818.65	PASS	AB=0.605;AC=23;AF=0.411;AN=56;BaseQRankSum=-18.483;DP=1161;FS=4.095;HRun=0;HaplotypeScore=140.9110;InbreedingCoeff=0.8851;MQ=60.72;MQ0=10;MQRankSum=-0.496;QD=31.02;ReadPosRankSum=2.648;VQSLOD=6.9028;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:59,0:60:99:0,144,1734	0/0:8,0:8:24.08:0,24,300	0/0:72,0:35:77.83:0,78,932	0/0:84,0:52:99:0,106,1236	0/0:35,0:35:80.63:0,81,1044	0/0:20,0:20:45.11:0,45,536	0/0:35,0:36:78.08:0,78,950	1/1:19,36:55:99:1812,117,0	0/0:37,0:37:99:0,102,1237	0/0:41,0:41:99:0,99,1237	0/0:22,0:22:57.13:0,57,682	1/1:4,34:39:96.33:1585,96,0	1/1:13,37:51:33.48:1592,33,0	0/0:50,0:50:99:0,120,1494	0/0:50,0:50:99:0,123,1512	0/0:58,0:58:99:0,132,1624	1/1:14,34:49:87.98:1466,88,0	1/1:8,32:40:42.77:1192,43,0	1/1:10,11:22:4.58:578,5,0	1/1:7,22:29:22.67:904,23,0	1/1:20,65:86:96.58:2650,97,0	0/1:9,16:26:32.92:534,0,33	1/1:8,20:29:16.78:787,17,0	1/1:19,42:61:66.39:2113,66,0	0/0:22,0:22:60.19:0,60,751	0/0:35,0:35:90.28:0,90,1115	1/1:3,17:20:4.61:606,5,0	0/0:21,0:21:51.11:0,51,607
chr10	52536879	.	GCA	G	4820.81	PASS	AB=0.889;AC=15;AF=0.268;AN=56;BaseQRankSum=10.480;DP=805;FS=4.795;HRun=0;HaplotypeScore=111.8154;InbreedingCoeff=0.6805;MQ=64.31;MQ0=5;MQRankSum=0.715;QD=19.44;ReadPosRankSum=4.195;VQSLOD=5.1473;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,30:43:61.15:972,61,0	0/0:10,0:10:30.10:0,30,499	0/0:33,0:26:22.69:0,23,751	0/0:37,0:33:57.66:0,58,876	0/0:30,0:30:78.27:0,78,1296	0/0:18,1:19:7.29:0,7,660	0/1:18,2:20:27.57:28,0,642	0/0:46,1:47:70.44:0,70,1650	0/0:25,0:25:60.19:0,60,972	0/1:26,3:29:47.35:47,0,878	0/0:23,1:24:28.36:0,28,999	1/1:5,27:32:66.21:833,66,0	1/1:4,25:29:66.21:832,66,0	0/0:36,1:37:64.48:0,64,1566	0/0:38,0:38:99:0,105,1667	0/0:39,1:40:55.44:0,55,1420	0/0:40,0:40:99:0,105,1743	0/0:31,1:32:43.41:0,43,1205	0/0:22,0:22:51.16:0,51,818	0/0:24,0:24:60.19:0,60,971	0/0:37,1:38:49.32:0,49,1301	1/1:3,12:15:27.09:341,27,0	1/1:0,24:23:54.17:681,54,0	1/1:3,29:33:84.10:1036,84,0	0/0:25,1:26:37.36:0,37,1109	0/1:19,4:22:50.41:50,0,802	0/0:16,1:17:1.25:0,1,534	0/0:18,0:18:51.17:0,51,846
chr10	52537056	.	TA	T	1532.15	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.645;DP=649;FS=3.923;HRun=1;HaplotypeScore=58.0923;InbreedingCoeff=0.9800;MQ=67.58;MQ0=0;MQRankSum=0.907;QD=30.64;ReadPosRankSum=1.862;VQSLOD=3.3967;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,105,1482	0/0:22,0:22:66.14:0,66,884	0/0:4,0:4:11.98:0,12,116	0/0:7,0:7:17.98:0,18,196	0/0:34,0:34:99:0,102,1460	0/0:29,0:29:87.23:0,87,1166	0/0:19,0:19:57.15:0,57,762	0/0:52,0:52:99:0,156,2175	0/0:20,0:20:60.11:0,60,777	0/0:17,0:17:51.16:0,51,715	0/0:28,0:28:81.21:0,81,1111	0/0:32,0:32:96.24:0,96,1305	0/0:14,0:14:42.11:0,42,578	0/0:32,0:32:96.27:0,96,1327	0/0:22,0:22:66.17:0,66,941	0/0:23,0:23:69.21:0,69,956	1/1:2,29:31:72.24:992,72,0	1/1:0,19:19:48.16:661,48,0	0/0:25,0:25:75.19:0,75,1003	0/0:28,0:28:81.24:0,81,1132	0/0:15,0:15:45.10:0,45,601	0/0:18,0:18:54.12:0,54,727	0/0:17,0:17:51.14:0,51,692	0/0:29,0:29:87.27:0,87,1221	0/0:28,0:28:84.26:0,84,1195	0/0:16,0:16:48.16:0,48,702	0/0:16,0:16:48.08:0,48,602	0/0:17,0:17:51.15:0,51,708
chr10	52537259	.	TA	T	9281.10	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=14.454;DP=722;FS=1.635;HRun=7;HaplotypeScore=70.2545;InbreedingCoeff=0.9977;MQ=66.58;MQ0=3;MQRankSum=-0.943;QD=24.95;ReadPosRankSum=1.206;VQSLOD=5.4619;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,49:53:99:1407,138,0	1/1:2,5:6:15.03:152,15,0	0/0:17,0:18:35.18:0,35,467	0/0:17,0:15:36.12:0,36,452	0/0:23,0:23:69.21:0,69,853	0/0:28,0:28:78.25:0,78,979	0/0:26,0:26:63.20:0,63,791	1/1:8,27:34:81.15:819,81,0	0/0:24,0:24:60.18:0,60,743	0/0:36,0:36:96.31:0,96,1207	0/0:18,0:18:51.16:0,51,642	1/1:3,26:29:72.16:734,72,0	1/1:5,25:30:68.60:729,69,0	0/0:36,0:36:96.30:0,96,1196	1/1:6,34:40:90.20:918,90,0	1/1:5,27:32:69.15:704,69,0	0/0:25,0:25:72.22:0,72,893	0/0:26,0:26:66.21:0,66,826	1/1:4,20:24:60.12:606,60,0	1/1:2,27:29:78.17:794,78,0	1/1:2,16:18:48.11:490,48,0	1/1:3,14:17:33.07:337,33,0	1/1:0,20:20:54.12:551,54,0	1/1:0,19:19:57.13:582,57,0	0/0:37,0:37:99:0,102,1283	0/0:26,0:26:69.22:0,69,864	1/1:2,17:19:45.10:459,45,0	0/0:10,0:10:30.10:0,30,377
chr10	52537924	.	T	TA	1001.81	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-6.871;DP=613;FS=0.000;HRun=7;HaplotypeScore=55.6558;InbreedingCoeff=0.9905;MQ=64.12;MQ0=0;MQRankSum=0.307;QD=27.83;ReadPosRankSum=1.416;VQSLOD=4.2548;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:87.11:0,87,828	0/0:13,0:13:39.06:0,39,377	0/0:14,0:14:29.25:0,29,262	0/0:5,0:5:15.02:0,15,141	0/0:28,0:28:73:0,73,698	0/0:23,0:23:60.08:0,60,573	0/0:21,0:21:57.09:0,57,550	0/0:27,0:27:72.11:0,72,695	0/0:20,0:20:60.09:0,60,577	0/0:31,0:31:71.47:0,71,671	0/0:15,0:15:36.05:0,36,348	0/0:35,0:35:96.13:0,96,916	0/0:23,0:23:54.08:0,54,521	0/0:22,0:22:63.08:0,63,602	0/0:31,0:31:90.10:0,90,856	0/0:24,0:24:69.09:0,69,659	1/1:1,18:19:51.16:616,51,0	1/1:3,14:17:42.13:507,42,0	0/0:20,0:20:51.06:0,51,484	0/0:37,0:37:99:0,102,974	0/0:17,0:17:45.07:0,45,434	0/0:13,0:13:30.05:0,30,290	0/0:20,0:20:48.07:0,48,461	0/0:10,0:10:27.04:0,27,261	0/0:20,0:20:54.08:0,54,521	0/0:29,0:29:81.13:0,81,782	0/0:34,0:34:93.13:0,93,892	0/0:13,0:13:33.04:0,33,318
chr10	52538147	.	G	GA	6020.36	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-14.578;DP=562;FS=2.109;HRun=6;HaplotypeScore=50.6390;InbreedingCoeff=0.9772;MQ=73.92;MQ0=1;MQRankSum=-1.759;QD=32.02;ReadPosRankSum=4.230;VQSLOD=5.0330;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,23:26:69.18:850,69,0	1/1:2,9:11:27.09:340,27,0	0/0:20,0:19:11.70:0,12,377	0/0:13,0:12:5.87:0,6,224	0/0:32,0:32:90.20:0,90,918	0/0:12,0:12:33.08:0,33,337	0/0:15,0:15:33.07:0,33,337	0/0:38,0:38:99:0,105,1060	0/0:22,0:22:60.12:0,60,605	0/0:26,0:26:75.17:0,75,765	0/0:29,0:29:75.16:0,75,765	1/1:2,22:24:60.19:755,60,0	1/1:2,17:19:48.15:604,48,0	0/0:16,0:16:45.10:0,45,459	1/1:3,23:26:66.21:830,66,0	1/1:1,13:14:39.12:491,39,0	1/1:1,12:13:36.12:452,36,0	1/1:1,7:8:21.07:264,21,0	0/0:9,0:9:18.04:0,18,184	0/0:28,0:28:84.15:0,84,842	0/0:19,0:19:45.06:0,45,448	1/1:1,10:11:27.09:340,27,0	1/1:4,16:20:45.14:566,45,0	1/1:2,14:16:42.13:528,42,0	0/0:23,0:23:63.13:0,63,637	0/0:30,0:30:72.15:0,72,735	0/0:35,0:35:99:0,99,1009	0/0:7,0:7:21.05:0,21,214
chr10	52539145	.	T	TACTG	7113.27	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-6.422;DP=695;FS=13.785;HRun=0;HaplotypeScore=120.3570;InbreedingCoeff=0.9982;MQ=84.32;MQ0=0;MQRankSum=-1.647;QD=67.75;ReadPosRankSum=1.366;VQSLOD=6.2874;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:81.28:0,81,1495	0/0:12,0:12:36.10:0,36,638	0/0:27,0:27:66.21:0,66,1164	0/0:23,0:23:66.14:0,66,1153	0/0:37,0:37:99:0,108,1982	0/0:17,0:17:51.17:0,51,951	0/0:19,0:19:54.17:0,54,977	0/0:35,0:35:96.32:0,96,1752	0/0:24,0:24:66.21:0,66,1186	0/0:29,0:29:87.30:0,87,1619	0/0:21,0:21:63.21:0,63,1143	1/1:2,27:29:81.28:2154,81,0	1/1:4,23:27:22.27:1932,22,0	0/0:23,0:23:66.20:0,66,1170	0/0:38,0:38:99:0,108,2015	0/0:33,0:33:93.31:0,93,1702	0/0:20,0:20:51.13:0,51,917	0/0:20,0:20:60.20:0,60,1088	0/0:19,0:19:54.17:0,54,974	0/0:24,0:24:69.21:0,69,1226	0/0:43,0:43:99:0,120,2232	1/1:3,14:18:45.15:1189,45,0	1/1:0,11:11:33.11:879,33,0	1/1:1,19:20:36.12:959,36,0	0/0:22,0:22:63.22:0,63,1165	0/0:25,0:25:72.25:0,72,1344	0/0:45,0:45:99:0,135,2505	0/0:7,0:7:21.07:0,21,392
chr10	52539330	.	T	TCAGGAAAACAAGACACGTGCA	11007.72	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-1.127;DP=546;FS=4.744;HRun=0;HaplotypeScore=277.8775;InbreedingCoeff=0.9724;MQ=77.05;MQ0=0;MQRankSum=-10.419;QD=166.78;ReadPosRankSum=2.303;VQSLOD=4.2390;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,3:12:15.05:1325,15,0	0/0:8,0:8:24.06:0,24,1246	0/0:11,0:11:33.11:0,33,1748	0/0:13,0:13:39.13:0,39,2040	0/0:35,0:35:99:0,105,5086	0/0:21,0:21:63.22:0,63,3497	0/0:13,0:13:39.10:0,39,1646	0/0:35,0:35:99:0,99,4965	0/0:18,0:18:51.18:0,51,2593	0/0:23,0:23:69.24:0,69,3435	0/0:26,0:26:78.26:0,78,4128	1/1:6,2:10:18.06:1647,18,0	1/1:8,3:13:24.08:2134,24,0	0/0:14,0:14:42.14:0,42,2379	0/0:27,0:27:81.28:0,81,4194	0/0:21,0:21:60.20:0,60,3125	0/0:25,0:25:75.26:0,75,3928	0/0:19,0:19:57.20:0,57,3319	0/0:16,0:16:48.16:0,48,2740	0/0:38,0:38:99:0,114,6019	0/0:18,0:18:54.19:0,54,2816	1/1:4,8:15:33.11:2878,33,0	1/1:7,4:13:29.78:2411,30,0	1/1:2,1:3:6.02:612,6,0	0/0:21,0:21:63.22:0,63,3531	0/0:30,0:30:87.29:0,87,4436	0/0:36,0:35:99:0,108,5067	0/0:12,0:12:36.12:0,36,1543
chr10	52540869	.	GGGGCCC	G	3173.15	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=8.236;DP=460;FS=0.000;HRun=0;HaplotypeScore=102.4281;InbreedingCoeff=0.9305;MQ=67.32;MQ0=0;MQRankSum=-7.608;QD=40.68;ReadPosRankSum=-3.590;VQSLOD=2.8744;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,105,3400	0/0:4,0:4:6.02:0,6,210	0/0:4,0:4:6.02:0,6,155	0/0:7,0:7:8.96:0,9,217	0/0:18,0:18:48.16:0,48,1680	0/0:17,0:17:51.16:0,51,1656	0/0:26,0:26:72.25:0,72,2510	1/1:2,14:16:39.07:698,39,0	0/0:18,0:18:51.17:0,51,1662	0/0:10,0:10:24.08:0,24,754	0/0:14,0:14:39.13:0,39,1362	0/0:22,0:22:60.19:0,60,1976	0/0:23,0:23:63.20:0,63,2023	0/0:18,0:18:48.16:0,48,1633	0/0:16,0:16:42.11:0,42,1354	0/0:11,0:11:33.11:0,33,1081	0/0:26,0:26:75.24:0,75,2512	0/0:26,0:26:75.26:0,75,2523	1/1:2,12:14:35.87:543,36,0	1/1:0,8:8:24.08:540,24,0	1/1:7,17:24:36.05:668,36,0	0/0:12,0:12:33.11:0,33,1009	0/0:9,0:9:18.05:0,18,545	0/0:22,0:22:63.22:0,63,2103	0/0:22,0:22:60.21:0,60,2094	0/0:17,0:17:39.13:0,39,1296	1/1:2,14:16:39.13:898,39,0	0/0:4,0:4:12.04:0,12,361
chr10	52541297	.	T	TC	7045.16	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-2.310;DP=473;FS=8.573;HRun=3;HaplotypeScore=52.7612;InbreedingCoeff=0.9800;MQ=78.40;MQ0=0;MQRankSum=-1.098;QD=36.89;ReadPosRankSum=2.623;VQSLOD=5.1246;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,30:32:78.26:1092,78,0	1/1:1,9:10:21.07:292,21,0	0/0:8,0:7:18.05:0,18,211	0/0:18,0:17:41.94:0,42,465	0/0:8,0:8:24.07:0,24,288	0/0:14,0:14:42.13:0,42,504	0/0:25,0:25:72.22:0,72,864	0/0:13,0:13:30.08:0,30,350	0/0:11,0:11:33.10:0,33,395	0/0:23,0:23:63.18:0,63,744	0/0:5,0:5:15.05:0,15,180	1/1:0,25:25:75.25:1050,75,0	1/1:3,13:16:39.13:541,39,0	0/0:36,0:36:99:0,105,1248	1/1:0,15:15:42.14:588,42,0	1/1:1,19:20:57.19:795,57,0	1/1:2,23:25:66.22:924,66,0	1/1:0,15:15:42.14:588,42,0	0/0:17,0:17:51.15:0,51,602	0/0:7,0:7:21.06:0,21,247	0/0:46,0:46:99:0,123,1473	1/1:0,6:6:15.05:209,15,0	1/1:0,4:4:9.03:125,9,0	1/1:1,22:22:60.20:840,60,0	0/0:16,0:16:42.13:0,42,503	0/0:17,0:17:48.14:0,48,566	0/0:14,0:14:42.13:0,42,504	0/0:4,0:4:12.04:0,12,143
chr10	52542133	.	A	ATATG	4503.70	PASS	AB=0.899;AC=11;AF=0.204;AN=54;BaseQRankSum=-10.842;DP=739;FS=1.672;HRun=0;HaplotypeScore=174.2397;InbreedingCoeff=0.6199;MQ=72.91;MQ0=1;MQRankSum=4.630;QD=25.44;ReadPosRankSum=-0.041;VQSLOD=4.7110;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:18,0:29:62.91:63,0,225	0/0:15,0:15:14.94:0,15,124	0/0:45,0:37:9.02:0,9,111	0/0:29,0:23:5.63:0,6,90	0/0:22,0:22:48.13:0,48,725	0/0:20,0:20:42.13:0,42,635	0/0:18,0:18:21.07:0,21,329	./.	0/0:24,0:24:39.09:0,39,562	0/0:32,0:32:36.11:0,36,540	0/0:22,0:22:36.10:0,36,519	1/1:12,24:36:60.21:1414,60,0	1/1:10,10:21:36.12:849,36,0	0/0:26,0:26:42.13:0,42,634	0/0:33,0:33:53.74:0,54,486	0/0:28,0:27:55.85:0,56,485	0/0:9,0:16:15.02:0,15,140	0/1:6,0:11:3.46:3,0,47	0/0:13,0:21:20.06:0,20,174	0/0:14,0:36:36.93:0,37,338	0/0:12,0:16:3:0,3,28	1/1:12,15:27:39.13:922,39,0	1/1:13,15:30:33.11:780,33,0	0/1:13,9:23:22.85:473,0,23	0/0:36,0:36:66.22:0,66,1025	0/0:28,0:28:57.18:0,57,867	0/0:12,0:32:39.04:0,39,364	0/0:25,0:25:27.09:0,27,417
chr10	52542143	.	ATG	A	820.93	PASS	AB=0.851;AC=7;AF=0.125;AN=56;BaseQRankSum=14.711;DP=709;FS=0.816;HRun=0;HaplotypeScore=150.5410;InbreedingCoeff=-0.1663;MQ=63.00;MQ0=2;MQRankSum=-11.094;QD=5.01;ReadPosRankSum=4.534;VQSLOD=2.8372;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:16.86:0,17,584	0/1:8,5:13:70.10:70,0,72	0/0:41,0:28:78.42:0,78,1146	0/0:33,0:24:48.52:0,49,924	0/0:22,0:22:66.23:0,66,1227	0/0:23,0:23:69.16:0,69,1180	0/0:18,0:18:54.18:0,54,906	0/0:28,0:27:8.27:0,8,957	0/0:23,0:23:69.20:0,69,1155	0/0:28,0:28:84.29:0,84,1425	0/0:24,0:24:72.24:0,72,1250	0/0:37,0:37:90.27:0,90,1205	0/0:21,0:21:60.20:0,60,856	0/0:25,0:25:75.21:0,75,1254	0/1:13,18:31:99:274,0,129	0/1:9,18:27:30.51:322,0,31	0/1:13,0:13:27.85:28,0,146	0/0:11,0:10:2.12:0,2,245	0/1:18,0:17:24.59:25,0,358	0/1:30,0:30:99:154,0,227	0/0:11,0:11:0.54:0,1,83	0/0:27,0:27:69.21:0,69,942	0/0:29,0:29:64.91:0,65,901	0/0:24,0:24:57.11:0,57,756	0/0:37,0:37:99:0,111,1958	0/0:26,0:26:75.26:0,75,1395	0/1:32,0:31:77.65:78,0,230	0/0:25,0:25:75.20:0,75,1207
chr10	52542147	.	ATGTATG	A	3156.95	PASS	AB=0.887;AC=9;AF=0.161;AN=56;BaseQRankSum=14.691;DP=747;FS=3.585;HRun=0;HaplotypeScore=203.8450;InbreedingCoeff=-0.1894;MQ=59.88;MQ0=3;MQRankSum=-11.970;QD=15.25;ReadPosRankSum=5.895;VQSLOD=2.9143;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:68.82:0,69,803	0/1:8,5:13:55.99:214,0,56	0/0:45,0:31:89.89:0,90,1328	0/0:37,0:25:51.79:0,52,1369	0/0:25,0:25:75.26:0,75,2288	0/0:26,0:26:72.24:0,72,2090	0/0:18,0:18:51.17:0,51,1361	0/0:42,0:41:99:0,115,1484	0/0:20,0:20:60.19:0,60,1776	0/0:28,0:28:81.27:0,81,2153	0/0:25,0:25:72.22:0,72,2020	0/0:35,0:35:81.75:0,82,2254	0/0:21,0:21:57.18:0,57,1529	0/0:24,0:24:72.25:0,72,2082	0/1:14,18:32:99:775,0,104	0/1:11,18:29:20.92:951,0,21	0/1:16,0:16:99:155,0,144	0/1:11,0:10:49.02:49,0,311	0/1:24,0:23:99:191,0,522	0/1:32,0:32:99:473,0,173	0/1:15,0:15:32.82:44,0,33	0/0:26,0:26:63.21:0,63,1630	0/0:28,0:28:64.94:0,65,1735	0/0:23,0:23:57.19:0,57,1350	0/0:38,0:38:99:0,114,3371	0/0:25,0:25:75.25:0,75,2496	0/1:35,0:34:99:445,0,123	0/0:24,0:24:72.22:0,72,1835
chr10	52542928	.	A	AAAC	11765.01	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-15.418;DP=719;FS=5.973;HRun=0;HaplotypeScore=91.5429;InbreedingCoeff=0.9997;MQ=64.79;MQ0=1;MQRankSum=-1.003;QD=45.78;ReadPosRankSum=5.739;VQSLOD=6.6776;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,29:37:72.25:1559,72,0	1/1:0,11:12:33.11:726,33,0	0/0:22,0:19:46.84:0,47,730	0/0:13,0:12:29.68:0,30,405	0/0:26,0:26:66.22:0,66,1027	0/0:25,0:25:72.23:0,72,1115	0/0:24,0:24:69.23:0,69,1084	0/0:36,0:36:90.29:0,90,1349	0/0:28,0:28:78.27:0,78,1227	0/0:36,0:36:99:0,102,1557	0/0:16,0:16:42.14:0,42,667	1/1:1,32:35:69.24:1514,69,0	1/1:2,25:29:63.18:1332,63,0	0/0:20,0:20:60.20:0,60,950	1/1:4,40:45:93.32:2051,93,0	1/1:2,34:37:33.04:1546,33,0	0/0:21,0:21:54.17:0,54,837	0/0:15,0:15:41.65:0,42,656	0/0:18,0:18:48.15:0,48,716	0/0:30,0:30:87.29:0,87,1365	0/0:36,0:36:99:0,105,1620	1/1:2,22:24:63.14:1219,63,0	1/1:1,23:24:54.18:1157,54,0	1/1:0,14:14:30.10:662,30,0	0/0:21,0:21:54.12:0,54,771	0/0:32,0:32:96.32:0,96,1473	0/0:21,0:21:57.19:0,57,879	0/0:22,0:22:66.22:0,66,1034
chr10	52544029	.	G	GA	2373.93	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=5.650;DP=531;FS=4.194;HRun=8;HaplotypeScore=62.4260;InbreedingCoeff=0.9908;MQ=68.33;MQ0=2;MQRankSum=-1.084;QD=21.78;ReadPosRankSum=2.181;VQSLOD=4.1258;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,26:29:38.73:700,39,0	0/0:10,0:10:30.02:0,30,274	0/0:9,0:6:14.80:0,15,122	0/0:11,0:9:18.01:0,18,164	0/0:27,0:27:75.03:0,75,682	0/0:25,0:25:75.01:0,75,673	0/0:18,0:18:47.96:0,48,426	0/0:31,0:31:84.04:0,84,768	0/0:9,0:9:24.01:0,24,220	0/0:18,0:18:45.02:0,45,412	0/0:17,0:18:44.06:0,44,389	1/1:2,15:17:36.11:415,36,0	1/1:2,18:20:39.12:450,39,0	0/0:19,0:20:50.05:0,50,445	0/0:21,0:21:57.02:0,57,522	0/0:26,0:26:75.03:0,75,682	0/0:16,0:16:48.01:0,48,434	0/0:17,0:17:43.27:0,43,387	0/0:17,0:17:48.02:0,48,439	0/0:31,0:31:61.60:0,62,739	0/0:13,0:13:36.02:0,36,329	1/1:2,13:15:36.57:408,37,0	1/1:4,14:18:29.97:346,30,0	1/1:2,8:10:21.06:242,21,0	0/0:17,0:17:48.03:0,48,439	0/0:19,0:19:39:0,39,354	0/0:33,0:33:92.79:0,93,835	0/0:15,1:15:16.06:0,16,331
chr10	52544372	.	AC	A	2863.67	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=13.947;DP=581;FS=0.916;HRun=1;HaplotypeScore=68.1388;InbreedingCoeff=0.9989;MQ=83.68;MQ0=0;MQRankSum=-4.022;QD=32.92;ReadPosRankSum=1.422;VQSLOD=3.3788;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:48.16:0,48,761	0/0:11,0:11:33.11:0,33,528	0/0:15,0:16:33.68:0,34,679	0/0:18,0:18:54.18:0,54,812	0/0:34,0:34:99:0,99,1551	0/0:27,0:26:81.28:0,81,1294	0/0:16,0:16:48.15:0,48,743	0/0:20,0:20:60.20:0,60,958	0/0:22,0:22:66.23:0,66,1055	0/0:20,0:20:60.20:0,60,960	0/0:23,0:23:69.24:0,69,1098	1/1:0,23:23:69.22:879,69,0	1/1:2,21:23:61.44:777,61,0	0/0:22,0:22:66.23:0,66,1055	0/0:26,0:26:78.24:0,78,1221	0/0:35,0:35:99:0,105,1655	0/0:24,0:24:72.19:0,72,1078	0/0:18,0:18:51.17:0,51,815	0/0:18,0:17:54.18:0,54,863	0/0:34,0:34:99:0,102,1621	0/0:14,0:14:42.14:0,42,671	1/1:2,12:14:36.09:448,36,0	1/1:0,17:17:51.17:662,51,0	1/1:0,10:10:21.03:273,21,0	0/0:18,0:18:54.17:0,54,834	0/0:14,0:14:42.14:0,42,671	0/0:32,0:32:96.33:0,96,1529	0/0:16,0:16:48.16:0,48,767
chr10	52550633	.	T	TA	244.78	PASS	AC=14;AF=1.000;AN=14;DP=109;FS=0.000;HRun=1;HaplotypeScore=13.6789;MQ=9.91;MQ0=89;QD=7.42;VQSLOD=0.6000;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	1/1:2,1:1:2.99:23,3,0	1/1:4,2:2:6.02:67,6,0	./.	./.	./.	1/1:2,3:4:11.82:109,12,0	1/1:2,0:1:1.25:3,1,0	./.	./.	1/1:2,1:1:3.01:33,3,0	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	1/1:5,1:1:3.01:33,3,0	1/1:7,1:2:5.85:46,6,0	./.	./.
chr10	52552028	.	GTC	G	1303.51	PASS	AB=0.982;AC=20;AF=0.357;AN=56;BaseQRankSum=7.542;DP=965;FS=0.838;HRun=0;HaplotypeScore=215.8309;InbreedingCoeff=0.2898;MQ=43.45;MQ0=26;MQRankSum=-1.950;QD=2.69;ReadPosRankSum=-3.540;VQSLOD=2.2554;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:23:5.99:49,6,0	1/1:14,0:14:3.39:19,3,0	0/0:55,0:16:44.46:0,44,639	0/1:67,0:19:20.12:20,0,391	0/0:35,0:30:29.95:0,30,504	0/0:25,0:24:41.59:0,42,681	0/0:18,0:18:36.10:0,36,618	0/1:39,0:31:99:218,0,186	0/0:42,0:37:58.52:0,59,1065	0/0:41,0:30:72.17:0,72,1216	0/0:24,0:24:32.95:0,33,518	1/1:32,0:31:13.33:173,13,0	1/1:34,0:34:17.96:368,18,0	0/0:33,0:29:48.45:0,48,833	1/1:22,0:21:11.69:84,12,0	1/1:25,0:24:0.04:69,0,0	0/0:46,0:45:99:0,105,2143	0/0:30,0:29:69.93:0,70,1106	0/0:21,0:16:11.52:0,12,101	0/1:27,1:24:84.49:84,0,165	0/1:66,3:61:99:108,0,633	0/1:34,0:32:40.02:72,0,40	0/1:26,2:28:4.95:43,0,5	0/1:43,0:43:45.33:106,0,45	0/0:44,0:43:44.19:0,44,809	0/0:43,0:36:88.25:0,88,1636	0/1:22,0:22:69.63:70,0,243	0/0:22,0:22:33.09:0,33,568
chr10	52552041	.	AGT	A	2236.14	PASS	AB=0.856;AC=18;AF=0.321;AN=56;BaseQRankSum=8.015;DP=1081;FS=1.655;HRun=0;HaplotypeScore=253.5135;InbreedingCoeff=0.6023;MQ=38.35;MQ0=49;MQRankSum=-1.244;QD=6.13;ReadPosRankSum=-0.508;VQSLOD=2.5836;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:18,12:26:26.61:96,0,27	1/1:13,0:16:6.44:63,6,0	0/0:48,0:9:5.98:0,6,63	0/0:54,0:8:5.93:0,6,63	0/0:42,0:35:24.08:0,24,375	0/0:28,0:27:39.07:0,39,608	0/0:24,0:23:42.10:0,42,627	0/0:42,0:22:32.99:0,33,447	0/0:46,0:38:57.05:0,57,909	0/0:53,0:39:51.48:0,51,850	0/0:28,1:27:1.59:0,2,233	1/1:22,14:35:38.05:476,38,0	1/1:19,19:36:63.14:733,63,0	0/0:35,0:32:2.10:0,2,522	1/1:27,1:27:8.47:100,8,0	1/1:32,2:33:10.89:144,11,0	0/0:48,0:47:99:0,109,1609	0/0:29,0:29:60.15:0,60,887	0/0:23,0:15:22.63:0,23,301	0/1:35,1:30:2.32:2,0,392	0/0:74,0:63:99:0,111,1676	0/1:32,10:39:3.77:132,0,4	1/1:22,10:33:14.99:209,15,0	1/1:29,16:44:36:425,36,0	0/0:52,0:54:29.46:0,29,651	0/0:53,0:39:76.45:0,76,1080	0/0:29,0:29:53.27:0,53,749	0/1:20,1:21:42.64:43,0,372
chr10	52552043	.	T	TGTGA	370.89	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=6.607;DP=1088;FS=2.537;HRun=0;HaplotypeScore=300.2933;InbreedingCoeff=0.7741;MQ=37.88;MQ0=53;MQRankSum=-3.194;QD=3.31;ReadPosRankSum=-6.061;VQSLOD=0.6904;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:26:24.48:24,0,51	1/1:15,2:16:8.37:44,8,0	0/0:43,0:6:15:0,15,140	0/0:50,0:6:11.99:0,12,106	0/0:44,0:36:27.08:0,27,451	0/0:29,0:27:41.31:0,41,718	0/0:24,0:23:47.58:0,48,736	0/0:41,0:22:52.25:0,52,644	0/0:46,0:37:33.11:0,33,1049	0/0:54,0:40:82.73:0,83,1144	0/0:30,0:28:26.91:0,27,349	0/0:36,0:36:17.38:0,17,246	0/0:42,0:40:46.28:0,46,522	0/0:36,0:33:50.49:0,50,769	1/1:27,1:27:17.57:147,18,0	1/1:30,2:33:22.07:297,22,0	0/0:45,0:44:99:0,115,1953	0/0:28,0:28:63.32:0,63,1058	0/0:24,0:15:25.43:0,25,377	0/0:38,0:30:38.92:0,39,602	0/0:75,0:63:99:0,135,2154	0/0:44,0:41:8.22:0,8,124	0/0:39,0:38:21.86:0,22,194	0/0:46,0:43:40.06:0,40,338	0/0:56,0:54:36.88:0,37,798	0/0:54,0:39:62.11:0,62,1272	0/0:29,0:29:35.27:0,35,859	0/0:21,0:21:40.92:0,41,525
chr10	52552057	.	TGA	T	655.63	PASS	AB=0.991;AC=15;AF=0.278;AN=54;BaseQRankSum=9.000;DP=1087;FS=5.378;HRun=0;HaplotypeScore=273.8502;InbreedingCoeff=0.0617;MQ=36.57;MQ0=66;MQRankSum=-2.975;QD=1.26;ReadPosRankSum=-0.742;VQSLOD=1.7988;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:28,1:25:22.70:23,0,43	1/1:18,0:16:7.87:35,8,0	./.	0/1:31,0:2:1.86:2,0,22	0/0:39,0:30:27.07:0,27,449	0/0:28,0:25:36.06:0,36,691	0/0:30,0:28:54.06:0,54,828	0/0:45,0:20:51.89:0,52,675	0/0:47,0:36:56.15:0,56,947	0/1:61,0:42:25.34:25,0,983	0/0:33,0:29:21.75:0,22,350	0/1:40,0:38:1.03:164,0,1	0/1:38,1:37:20.35:296,0,20	0/0:36,0:33:15.96:0,16,655	0/1:38,0:33:33.12:34,0,33	0/1:42,0:39:20.03:20,0,124	0/0:44,0:41:99:0,108,1920	0/0:27,0:26:56.67:0,57,1042	0/0:17,0:12:29.95:0,30,323	0/0:45,0:35:9.31:0,9,388	0/0:65,0:52:99:0,109,1937	0/1:43,2:43:36.51:39,0,37	0/1:45,0:41:34.31:34,0,40	1/1:42,0:39:22.88:123,23,0	0/0:60,0:55:41.93:0,42,800	0/1:69,0:47:17.72:18,0,1176	0/0:33,0:33:13.45:0,13,869	0/1:22,0:22:1.05:1,0,431
chr10	52552104	.	ATG	A	386.64	PASS	AB=0.846;AC=8;AF=0.154;AN=52;BaseQRankSum=8.708;DP=906;FS=10.527;HRun=0;HaplotypeScore=244.5378;InbreedingCoeff=-0.1750;MQ=32.06;MQ0=53;MQRankSum=-7.731;QD=1.41;ReadPosRankSum=-1.803;VQSLOD=0.8327;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,1:21:8.68:0,9,153	0/1:18,0:16:13.11:13,0,93	./.	./.	0/0:37,0:30:6.02:0,6,103	0/0:19,0:17:10.28:0,10,157	0/0:24,0:21:24.05:0,24,351	0/0:46,1:28:51.91:0,52,747	0/0:42,0:30:17.54:0,18,251	0/0:57,0:37:28.05:0,28,711	0/0:33,0:27:9.03:0,9,154	0/1:22,13:34:10.35:138,0,10	0/1:27,11:36:27.41:283,0,27	0/0:32,0:28:20.90:0,21,280	0/0:30,3:29:24.40:0,24,371	0/0:38,1:36:25.95:0,26,304	0/0:27,0:25:44.25:0,44,689	0/0:21,0:19:26.79:0,27,465	0/1:18,2:13:14.97:15,0,198	0/1:37,4:29:3.65:4,0,46	0/0:39,0:27:38.30:0,38,537	0/1:36,12:45:15.27:15,0,56	0/1:37,12:43:22.38:22,0,23	0/0:21,8:29:2.86:0,3,42	0/0:55,0:50:10.16:0,10,151	0/0:60,0:41:33.78:0,34,703	0/1:20,3:23:23.39:23,0,238	0/0:14,0:14:17.16:0,17,263
chr10	52552122	.	G	GTA	196.03	PASS	AB=0.980;AC=9;AF=0.173;AN=52;BaseQRankSum=6.032;DP=725;FS=8.839;HRun=0;HaplotypeScore=194.6697;InbreedingCoeff=-0.0845;MQ=29.96;MQ0=31;MQRankSum=-5.576;QD=0.78;ReadPosRankSum=0.066;VQSLOD=2.0532;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:13:8.52:0,9,136	0/1:14,0:12:6.36:6,0,82	./.	./.	0/0:34,0:27:6.02:0,6,91	0/0:16,0:14:8.19:0,8,135	0/0:16,0:15:11.88:0,12,157	0/0:30,0:14:32.81:0,33,477	0/0:37,0:26:7.99:0,8,107	0/1:42,0:29:59.54:60,0,504	0/0:26,0:21:8.41:0,8,130	0/0:29,3:30:2.88:0,3,19	0/1:25,5:28:34.63:35,0,44	0/0:26,0:22:8.45:0,8,102	0/0:26,0:23:16.26:0,16,244	0/1:34,0:31:8.53:9,0,199	0/0:18,0:16:31.87:0,32,406	0/0:20,0:18:22.52:0,23,315	0/1:18,0:15:5.88:6,0,203	0/0:35,0:26:0.76:0,1,42	0/0:27,0:17:21.07:0,21,316	0/0:43,1:42:1.57:0,2,35	0/1:42,0:38:0.79:1,0,1	1/1:24,1:24:0.92:3,1,0	0/0:42,0:38:0.23:0,0,41	0/1:45,0:29:99:187,0,365	0/0:20,0:20:1.33:0,1,183	0/0:12,0:12:21.05:0,21,277
chr10	52555135	.	T	TC	4358.95	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-11.264;DP=707;FS=0.000;HRun=6;HaplotypeScore=78.6179;InbreedingCoeff=0.9968;MQ=75.48;MQ0=0;MQRankSum=-2.473;QD=28.49;ReadPosRankSum=2.507;VQSLOD=5.4160;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,31:38:99:1231,99,0	0/0:6,0:6:18.04:0,18,184	0/0:21,0:22:44.24:0,44,556	0/0:24,0:24:19.56:0,20,403	0/0:31,0:31:75.13:0,75,749	0/0:21,0:21:63.13:0,63,635	0/0:26,0:26:75.17:0,75,765	0/0:34,0:34:90.14:0,90,901	0/0:22,0:22:63.14:0,63,642	0/0:25,0:25:63.13:0,63,638	0/0:25,0:25:63.12:0,63,634	1/1:0,28:28:75.11:943,75,0	1/1:2,28:30:72.23:903,72,0	0/0:25,0:25:69.15:0,69,704	0/0:33,0:33:90.18:0,90,911	0/0:35,0:35:93.20:0,93,948	0/0:20,0:20:54.12:0,54,551	0/0:19,0:19:54.09:0,54,542	0/0:20,0:20:51.11:0,51,520	0/0:27,0:27:75.15:0,75,757	0/0:22,0:22:60.13:0,60,611	1/1:1,20:21:36.12:452,36,0	1/1:3,22:25:41.96:527,42,0	1/1:1,10:11:24.08:302,24,0	0/0:27,0:27:75.14:0,75,755	0/0:25,0:25:69.14:0,69,698	0/0:45,0:45:99:0,123,1247	0/0:20,0:20:60.14:0,60,612
chr10	52555919	.	GTT	G	947.73	PASS	AB=0.909;AC=5;AF=0.089;AN=56;BaseQRankSum=0.828;DP=553;FS=13.522;HRun=12;HaplotypeScore=88.3922;InbreedingCoeff=0.7832;MQ=66.30;MQ0=1;MQRankSum=0.047;QD=16.06;ReadPosRankSum=3.061;VQSLOD=1.1110;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:26:35.22:0,35,385	0/0:4,0:8:7.29:0,7,106	0/0:24,0:18:17.13:0,17,204	0/0:22,0:17:25.75:0,26,190	0/0:25,0:29:72.14:0,72,930	0/0:25,0:26:62.66:0,63,834	0/0:13,0:14:38.40:0,38,513	0/0:25,0:26:62.34:0,62,811	0/0:14,0:16:38.59:0,39,486	0/0:25,0:25:69.23:0,69,1012	0/1:9,1:10:3.38:3,0,309	0/0:12,0:13:30.39:0,30,384	0/0:23,0:26:61.59:0,62,763	0/0:17,0:17:48.14:0,48,693	0/0:8,0:21:23.17:0,23,205	0/0:15,0:29:67.91:0,68,550	1/1:7,24:31:63.08:641,63,0	1/1:2,16:18:42.09:427,42,0	0/0:14,0:14:32.87:0,33,436	0/0:14,0:15:39.11:0,39,541	0/0:5,0:5:9.03:0,9,134	0/0:16,0:16:42.14:0,42,626	0/0:16,0:19:51.53:0,52,689	0/0:12,0:12:30.10:0,30,445	0/0:21,0:22:53.62:0,54,716	0/0:23,0:25:69:0,69,942	0/0:25,0:28:56.13:0,56,719	0/0:11,0:11:30.10:0,30,447
chr10	52557085	.	GTA	G	1838.58	PASS	AB=0.985;AC=36;AF=0.692;AN=52;BaseQRankSum=0.972;DP=456;FS=4.061;HRun=0;HaplotypeScore=71.8434;InbreedingCoeff=-0.3407;MQ=39.48;MQ0=100;MQRankSum=3.845;QD=4.19;ReadPosRankSum=-1.106;VQSLOD=1.8467;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:37,0:29:88.24:123,0,88	1/1:9,0:5:5.97:46,6,0	./.	./.	0/1:20,0:17:47.93:48,0,66	0/1:23,0:19:49.61:50,0,75	0/1:21,0:11:33.14:33,0,36	0/1:8,3:5:0.15:52,0,0	0/1:14,0:7:12.04:33,0,12	0/1:13,0:7:26.24:26,0,43	0/1:10,0:9:16.99:18,0,17	1/1:26,0:23:31.86:232,32,0	1/1:15,0:12:8.63:52,9,0	0/1:16,0:14:14.70:15,0,108	1/1:17,0:15:4.37:18,4,0	1/1:16,0:11:8.92:68,9,0	1/1:21,0:13:16.42:134,16,0	1/1:11,0:6:13.19:95,13,0	1/1:11,0:9:13.12:153,13,0	1/1:11,0:9:23.94:191,24,0	0/1:26,0:16:10.13:136,0,10	1/1:17,0:12:1.73:53,2,0	0/0:4,8:9:0:0,0,0	0/1:21,0:17:1.78:106,0,2	0/1:22,0:19:48.60:49,0,68	0/1:22,0:16:55.99:56,0,92	1/1:12,0:8:14.96:119,15,0	0/1:17,0:11:14.75:76,0,15
chr10	52557087	.	ATG	A	396.45	PASS	AB=0.972;AC=20;AF=0.385;AN=52;BaseQRankSum=2.119;DP=457;FS=0.000;HRun=0;HaplotypeScore=76.7723;InbreedingCoeff=0.0500;MQ=40.00;MQ0=99;MQRankSum=0.810;QD=1.40;ReadPosRankSum=0.801;VQSLOD=0.9636;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:40,0:32:44.16:44,0,278	1/1:9,0:5:2.92:17,3,0	./.	./.	0/0:20,0:17:14.88:0,15,184	0/1:21,1:18:31.17:31,0,146	0/0:18,0:9:6.49:0,6,90	0/0:12,0:6:2.46:0,2,25	0/0:14,0:7:3.01:0,3,42	0/1:13,0:7:28.06:28,0,40	0/0:10,0:9:6.01:0,6,67	1/1:26,0:23:5.81:68,6,0	1/1:8,8:13:2.93:22,3,0	0/1:17,0:15:13.05:13,0,227	1/1:10,5:13:5.98:52,6,0	0/1:11,5:12:0:0,0,0	0/0:19,0:11:2.99:0,3,23	0/0:11,0:6:1.41:0,1,2	0/0:12,0:9:1.33:0,1,8	0/0:10,0:8:0.37:0,0,1	0/0:28,0:19:7.36:0,7,55	1/1:17,0:12:9.02:100,9,0	0/0:12,0:9:0:0,0,0	0/1:20,0:16:26.42:132,0,26	0/1:21,0:18:3.83:4,0,121	0/1:23,0:16:13.77:14,0,185	0/1:12,0:8:0:0,0,0	0/1:17,0:11:4.55:5,0,42
chr10	52558310	.	C	CCT	1440.99	PASS	AB=1.000;AC=10;AF=0.185;AN=54;BaseQRankSum=2.540;DP=747;FS=1.644;HRun=0;HaplotypeScore=122.8890;InbreedingCoeff=0.6243;MQ=52.22;MQ0=26;MQRankSum=-1.353;QD=7.71;ReadPosRankSum=-0.627;VQSLOD=3.3182;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:41,6:48:2.28:508,2,0	0/0:11,0:11:20.91:0,21,175	0/0:26,0:4:5.99:0,6,53	0/0:36,0:9:20.62:0,21,172	0/0:27,0:27:74.83:0,75,747	0/0:27,0:27:62.49:0,62,660	0/0:35,0:35:93.03:0,93,1025	1/1:39,0:36:2.03:447,2,0	0/0:16,0:16:28.89:0,29,460	0/0:29,0:28:84.09:0,84,925	0/0:22,0:21:56.98:0,57,601	0/0:36,0:36:99:0,99,1121	0/0:18,0:18:44.91:0,45,546	0/0:19,0:19:44.81:0,45,495	0/0:30,0:30:17.82:0,18,146	0/0:25,0:25:48.38:0,48,398	0/0:28,0:28:41.21:0,41,333	0/0:26,0:26:10.65:0,11,322	1/1:16,0:16:46.98:365,47,0	./.	0/1:51,0:47:35.21:48,0,35	0/0:23,0:23:54.04:0,54,580	0/0:25,0:23:65.85:0,66,605	0/0:32,0:31:80.99:0,81,898	0/0:28,0:27:64.25:0,64,654	0/0:23,0:23:59.98:0,60,573	1/1:23,2:24:19.33:213,19,0	0/1:7,0:7:6.80:7,0,163
chr10	52558311	.	C	CTCTGTGTG	2578.74	PASS	AB=0.680;AC=11;AF=0.196;AN=56;BaseQRankSum=0.974;DP=781;FS=1.492;HRun=0;HaplotypeScore=191.8187;InbreedingCoeff=0.4829;MQ=52.34;MQ0=26;MQRankSum=-3.687;QD=8.99;ReadPosRankSum=-2.164;VQSLOD=2.3554;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:16,0:52:60.61:217,0,61	0/0:9,0:11:14.11:0,14,189	0/0:24,0:3:5.50:0,6,41	0/0:37,0:9:20.65:0,21,173	0/0:24,0:27:74.84:0,75,1025	0/0:22,0:26:57.86:0,58,976	0/0:29,0:35:92.82:0,93,1472	1/1:41,0:38:74.72:896,75,0	0/0:15,0:16:47.91:0,48,717	0/0:27,0:28:84.10:0,84,1368	0/0:23,0:22:57:0,57,870	0/0:35,0:37:99:0,99,1750	0/0:18,0:18:44.80:0,45,845	0/0:17,0:18:44.82:0,45,797	0/0:10,0:30:17.59:0,18,171	0/0:10,0:25:41.46:0,41,641	0/1:21,0:39:79.87:80,0,263	0/1:26,0:26:99:219,0,238	1/1:3,11:21:61.24:860,61,0	0/1:3,14:20:0:0,0,0	0/1:18,0:56:47.46:134,0,47	0/0:23,0:23:57.03:0,57,828	0/0:22,0:23:65.86:0,66,866	0/0:32,0:31:83.99:0,84,1433	0/0:28,0:27:64.18:0,64,803	0/0:22,0:23:59.99:0,60,701	1/1:3,19:26:16.89:333,17,0	0/0:7,0:7:16.14:0,16,260
chr10	52558549	.	G	GA	703.64	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=2.674;DP=619;FS=0.730;HRun=8;HaplotypeScore=80.3866;InbreedingCoeff=0.8438;MQ=73.53;MQ0=0;MQRankSum=-4.145;QD=16.75;ReadPosRankSum=0.522;VQSLOD=3.6927;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,102,933	0/0:18,0:18:42.01:0,42,385	0/1:12,0:12:2.78:3,0,71	0/0:13,0:12:20.92:0,21,174	0/0:24,0:24:54.01:0,54,493	0/0:34,0:34:87.03:0,87,796	0/0:16,0:16:45.02:0,45,412	0/0:28,0:28:75.01:0,75,680	0/0:19,0:19:51:0,51,462	0/0:30,0:30:75.03:0,75,683	0/0:23,0:23:54:0,54,492	0/0:27,0:27:75.03:0,75,682	0/0:23,0:23:66:0,66,595	0/0:18,0:18:45.01:0,45,412	0/0:28,0:28:68.92:0,69,631	0/0:26,0:27:61.88:0,62,598	1/1:4,17:21:51.10:565,51,0	1/1:3,6:9:24.03:259,24,0	0/0:16,0:16:45.02:0,45,412	0/0:29,0:29:72.01:0,72,659	0/0:13,0:13:36:0,36,324	0/0:20,0:20:54.02:0,54,494	0/0:21,0:21:45.01:0,45,411	0/0:24,0:24:63.02:0,63,572	0/0:26,0:26:72.04:0,72,659	0/0:26,0:26:72.02:0,72,653	0/0:21,0:21:57.02:0,57,522	0/0:13,0:13:39.02:0,39,357
chr10	52558578	.	G	GA	2553.50	PASS	AB=0.912;AC=14;AF=0.250;AN=56;BaseQRankSum=-4.172;DP=656;FS=0.399;HRun=10;HaplotypeScore=87.1221;InbreedingCoeff=0.6455;MQ=70.05;MQ0=1;MQRankSum=-3.138;QD=14.11;ReadPosRankSum=-0.293;VQSLOD=3.7394;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:43:64.02:0,64,184	1/1:4,16:21:23.31:437,23,0	0/1:13,1:13:16.21:16,0,91	0/0:11,0:10:6.80:0,7,51	0/0:32,0:32:71.83:0,72,591	0/1:24,3:27:1.06:1,0,405	0/0:15,0:15:35.95:0,36,296	0/0:28,3:31:30.80:0,31,452	0/0:22,0:23:37.48:0,37,385	0/0:30,0:30:49.99:0,50,410	0/0:26,0:26:65.88:0,66,542	0/0:29,0:30:76.92:0,77,621	0/0:23,0:23:59.90:0,60,492	0/0:21,2:23:33.78:0,34,475	1/1:3,31:34:87.22:927,87,0	1/1:4,22:27:50.38:725,50,0	1/1:4,13:17:33.06:343,33,0	1/1:2,10:12:24.06:256,24,0	0/0:21,0:20:41.90:0,42,339	0/0:35,1:36:51.84:0,52,630	0/1:9,1:10:17.02:17,0,83	0/0:19,0:20:49.94:0,50,396	0/1:17,2:19:13.04:13,0,315	0/0:21,1:22:27.72:0,28,415	0/0:21,0:21:56.93:0,57,468	0/0:30,1:31:48.86:0,49,602	0/0:22,0:22:31.68:0,32,454	0/0:14,0:14:41.93:0,42,341
chr10	52559742	.	CGTCTTT	C	2306.20	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.674;DP=644;FS=0.000;HRun=0;HaplotypeScore=136.8285;InbreedingCoeff=0.9974;MQ=88.48;MQ0=0;MQRankSum=-9.350;QD=59.13;ReadPosRankSum=0.812;VQSLOD=3.9535;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,39:39:96.29:2401,96,0	0/0:8,0:8:24.08:0,24,902	0/0:27,0:27:78.27:0,78,2623	0/0:21,0:21:60.21:0,60,2076	0/0:29,0:29:87.30:0,87,3223	0/0:23,0:23:69.24:0,69,2574	0/0:29,0:29:87.30:0,87,3180	0/0:33,0:33:93.28:0,93,3383	0/0:26,0:25:66.23:0,66,2436	0/0:26,0:26:78.27:0,78,2911	0/0:17,0:17:51.18:0,51,1896	0/0:24,0:24:69.24:0,69,2563	0/0:23,0:23:69.24:0,69,2583	0/0:17,0:17:51.18:0,51,1917	0/0:30,0:30:87.30:0,87,3173	0/0:17,0:17:51.18:0,51,1886	0/0:35,0:35:99:0,105,3836	0/0:19,0:19:57.20:0,57,2060	0/0:18,0:18:54.18:0,54,1798	0/0:30,0:30:90.31:0,90,3287	0/0:30,0:30:90.31:0,90,3311	0/0:11,0:11:33.11:0,33,1227	0/0:11,0:11:33.11:0,33,1156	0/0:17,0:17:51.16:0,51,1815	0/0:21,0:21:63.22:0,63,2360	0/0:21,0:21:63.22:0,63,2305	0/0:29,0:29:87.30:0,87,3214	0/0:13,0:13:39.13:0,39,1468
chr10	52560057	.	TA	T	562.45	PASS	AB=0.895;AC=14;AF=0.250;AN=56;BaseQRankSum=1.433;DP=580;FS=3.128;HRun=16;HaplotypeScore=74.7389;InbreedingCoeff=0.2600;MQ=74.09;MQ0=4;MQRankSum=2.548;QD=2.57;ReadPosRankSum=1.086;VQSLOD=-0.4121;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:37:34.35:0,34,234	0/0:0,0:6:11.36:0,11,57	0/0:36,0:19:3.48:0,3,39	0/0:24,0:16:17.30:0,17,91	0/0:24,0:27:31.31:0,31,300	0/0:21,6:27:22.03:0,22,290	0/0:13,0:13:14.57:0,15,176	0/1:19,16:38:38.37:198,0,38	0/1:16,0:16:14.73:15,0,93	0/0:17,0:20:20.94:0,21,258	0/0:16,0:16:12.74:0,13,188	0/1:11,1:12:1.79:2,0,86	0/1:17,1:18:0.13:0,0,96	0/0:10,0:10:17.96:0,18,147	0/0:11,0:20:27.53:0,28,167	0/0:14,0:26:30.07:0,30,184	0/0:9,0:23:22.85:0,23,118	0/0:12,0:23:14.46:0,14,82	0/1:14,4:19:46.57:47,0,92	1/1:3,12:15:25.93:144,26,0	1/1:4,11:17:16.19:94,16,0	0/1:6,0:6:1.89:2,0,75	0/0:15,0:15:32.66:0,33,249	0/1:16,0:17:8.47:8,0,86	0/0:21,0:21:1.96:0,2,172	0/1:23,4:28:15.08:15,0,178	1/1:9,23:33:14.91:196,15,0	0/0:14,1:15:14.73:0,15,210
chr10	52560340	.	AC	A	14080.88	PASS	AB=1.000;AC=55;AF=0.982;AN=56;BaseQRankSum=-1.534;DP=450;FS=11.348;HRun=1;HaplotypeScore=154.0094;InbreedingCoeff=-0.0201;MQ=71.89;MQ0=0;MQRankSum=-2.505;QD=31.29;ReadPosRankSum=2.372;VQSLOD=3.1472;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,22:22:57.17:683,57,0	1/1:0,6:6:18.05:214,18,0	1/1:2,9:11:21.53:242,22,0	0/1:8,0:10:17.84:180,0,18	1/1:0,15:15:42.07:464,42,0	1/1:0,19:19:54.16:646,54,0	1/1:1,15:16:46.69:531,47,0	1/1:6,29:35:93.75:1069,94,0	1/1:0,14:14:39.11:450,39,0	1/1:0,16:16:42.12:477,42,0	1/1:2,14:16:44:490,44,0	1/1:1,16:17:49.03:565,49,0	1/1:3,16:19:53.03:604,53,0	1/1:1,20:21:63.15:725,63,0	1/1:3,14:17:45.68:528,46,0	1/1:0,13:13:39.12:465,39,0	1/1:1,18:19:55.04:628,55,0	1/1:2,12:14:34.04:399,34,0	1/1:1,16:17:51.14:590,51,0	1/1:1,13:14:40:461,40,0	1/1:1,11:12:24.96:289,25,0	1/1:0,11:11:30.08:341,30,0	1/1:1,12:13:37.92:423,38,0	1/1:1,6:7:10.27:112,10,0	1/1:0,15:15:45.14:535,45,0	1/1:1,24:25:72.19:833,72,0	1/1:1,27:28:78.18:897,78,0	1/1:0,8:8:21.06:242,21,0
chr10	52560763	.	G	GA	1718.78	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-6.210;DP=681;FS=12.713;HRun=5;HaplotypeScore=82.4735;InbreedingCoeff=0.9967;MQ=91.06;MQ0=0;MQRankSum=-2.879;QD=27.72;ReadPosRankSum=1.652;VQSLOD=2.9481;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:84.18:0,84,889	1/1:1,9:10:27.09:355,27,0	0/0:27,0:27:69.16:0,69,733	0/0:28,0:28:43.02:0,43,558	0/0:39,0:39:99:0,114,1206	0/0:27,0:27:72.18:0,72,774	0/0:16,0:16:48.08:0,48,498	0/0:36,0:36:99:0,99,1057	0/0:20,1:21:20.67:0,21,573	0/0:26,0:26:72.17:0,72,768	0/0:22,0:22:66.16:0,66,706	0/0:24,0:24:60.15:0,60,645	0/0:31,0:31:90.22:0,90,967	0/0:27,0:27:72.16:0,72,763	1/1:3,26:29:66.21:869,66,0	1/1:2,21:23:21.92:638,22,0	0/0:21,0:21:63.16:0,63,675	0/0:22,0:22:60.11:0,60,629	0/0:22,0:22:63.13:0,63,661	0/0:31,0:31:87.22:0,87,933	0/0:26,0:26:69.14:0,69,723	0/0:18,0:18:54.14:0,54,580	0/0:20,0:20:54.13:0,54,578	0/0:26,0:26:78.11:0,78,805	0/0:16,0:16:45.09:0,45,475	0/0:20,0:20:57.14:0,57,613	0/0:32,0:32:84.16:0,84,876	0/0:11,0:11:33.08:0,33,355
chr10	52561232	.	C	CTGCAACATTGTTGAGAATA	57804.20	PASS	AB=0.800;AC=55;AF=0.982;AN=56;BaseQRankSum=0.851;DP=413;FS=3.477;HRun=0;HaplotypeScore=525.5921;InbreedingCoeff=-0.0296;MQ=59.08;MQ0=0;MQRankSum=-1.650;QD=139.96;ReadPosRankSum=1.558;VQSLOD=4.3391;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:18:36.12:2497,36,0	1/1:5,0:5:9.03:520,9,0	1/1:5,1:9:27.08:947,27,0	0/1:6,0:8:14.25:689,0,14	1/1:26,0:26:54.18:2938,54,0	1/1:14,0:14:29.87:1564,30,0	1/1:11,0:11:27.56:1439,28,0	1/1:18,0:18:54.19:3397,54,0	1/1:15,0:15:36.59:2034,37,0	1/1:20,0:20:57.20:3385,57,0	1/1:22,0:22:57.20:3908,57,0	1/1:14,0:14:30.10:1982,30,0	1/1:24,0:24:57.14:3033,57,0	1/1:18,0:18:42.14:2080,42,0	1/1:14,0:14:36.09:1775,36,0	1/1:15,0:15:38.49:2349,38,0	1/1:9,0:9:24.07:1291,24,0	1/1:3,0:3:6.02:497,6,0	1/1:3,0:3:9.03:354,9,0	1/1:12,0:12:27.09:1830,27,0	1/1:7,0:7:15.52:596,16,0	1/1:14,0:14:42.14:2511,42,0	1/1:15,0:15:40.38:2435,40,0	1/1:5,0:5:6.91:405,7,0	1/1:21,0:21:48.15:2828,48,0	1/1:31,0:31:78.25:4394,78,0	1/1:32,0:32:80.04:4677,80,0	1/1:10,0:10:18.53:1450,19,0
chr10	52561877	.	C	CT	1220.66	PASS	AB=1.000;AC=24;AF=0.429;AN=56;BaseQRankSum=9.155;DP=430;FS=0.457;HRun=12;HaplotypeScore=66.3022;InbreedingCoeff=0.7824;MQ=74.16;MQ0=4;MQRankSum=0.300;QD=6.36;ReadPosRankSum=-1.011;VQSLOD=1.8220;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:20:23.28:133,23,0	1/1:4,0:4:11.46:60,11,0	0/0:29,0:15:10.87:0,11,67	0/1:16,0:7:14.15:14,0,17	0/0:14,0:14:32.69:0,33,233	0/0:13,0:13:32.74:0,33,237	0/0:14,0:14:3.67:0,4,189	1/1:29,0:29:64.63:419,65,0	0/0:16,0:16:37.71:0,38,275	0/0:12,0:13:9.11:0,9,140	0/0:13,2:15:10.07:0,10,231	0/0:21,0:23:55.27:0,55,375	0/0:18,0:18:42.64:0,43,283	0/0:15,0:15:8.54:0,9,167	1/1:13,0:13:8.52:42,9,0	1/1:15,0:15:25.60:128,26,0	1/1:19,0:20:14.31:74,14,0	1/1:22,0:22:15.70:99,16,0	1/1:16,0:16:39.63:238,40,0	1/1:8,0:8:15.61:92,16,0	1/1:6,0:6:6.36:37,6,0	0/0:13,0:13:19.79:0,20,165	0/0:12,2:14:6.61:0,7,210	0/0:13,0:13:23.83:0,24,175	0/0:14,0:15:14.11:0,14,185	0/0:13,0:13:26.74:0,27,193	1/1:13,0:13:14.95:92,15,0	0/1:9,0:9:1.85:2,0,110
chr10	52561889	.	T	TTAA	4545.69	PASS	AB=0.947;AC=21;AF=0.375;AN=56;BaseQRankSum=-2.623;DP=458;FS=0.426;HRun=0;HaplotypeScore=70.0055;InbreedingCoeff=0.8804;MQ=72.06;MQ0=4;MQRankSum=-0.542;QD=25.39;ReadPosRankSum=-1.520;VQSLOD=4.4878;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:1,0:23:29.42:0,29,91	1/1:0,0:6:12.03:143,12,0	0/0:28,0:13:20.34:0,20,173	0/1:17,0:8:31.02:36,0,31	0/0:14,0:14:42:0,42,558	0/0:16,0:16:45.05:0,45,591	0/0:13,0:13:9.97:0,10,505	1/1:0,25:32:93.10:1457,93,0	0/0:19,0:19:53.12:0,53,742	0/0:13,0:13:16.35:0,16,408	0/0:17,0:17:19.35:0,19,570	0/0:21,0:21:56.60:0,57,719	0/0:18,0:18:51.91:0,52,581	0/0:15,0:15:40.67:0,41,407	1/1:0,2:14:9.03:122,9,0	1/1:0,0:19:27.06:329,27,0	1/1:3,1:19:18.53:320,19,0	1/1:2,1:20:17.64:374,18,0	1/1:2,16:20:56.60:918,57,0	1/1:1,9:10:24.03:389,24,0	1/1:0,5:6:6.02:131,6,0	0/0:15,0:15:34.99:0,35,460	0/0:15,0:15:41.12:0,41,559	0/0:10,0:10:30.10:0,30,440	0/0:16,0:16:27.44:0,27,565	0/0:12,0:12:33.03:0,33,458	1/1:0,12:14:18.06:326,18,0	0/0:13,0:13:38.86:0,39,497
chr10	52562151	.	G	GGA	17694.47	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-9.958;DP=776;FS=12.350;HRun=0;HaplotypeScore=89.0271;InbreedingCoeff=0.9996;MQ=94.09;MQ0=0;MQRankSum=-3.261;QD=55.30;ReadPosRankSum=2.534;VQSLOD=4.2787;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,32:34:87.30:1768,87,0	1/1:0,10:10:30.10:610,30,0	0/0:36,0:36:81.40:0,81,1477	0/0:33,0:33:87.27:0,87,1328	0/0:22,0:22:66.21:0,66,1032	0/0:40,0:40:99:0,117,1882	0/0:31,0:31:93.30:0,93,1480	1/1:4,26:33:96.29:1782,96,0	0/0:24,0:24:72.23:0,72,1150	0/0:25,0:25:75.25:0,75,1205	0/0:27,0:27:78.27:0,78,1265	0/0:28,0:28:84.29:0,84,1355	0/0:39,0:39:99:0,117,1899	0/0:28,0:28:81.26:0,81,1295	1/1:0,33:34:96.33:1951,96,0	1/1:7,31:40:99:2122,111,0	1/1:0,19:19:57.20:1158,57,0	1/1:0,24:25:72.25:1463,72,0	1/1:1,21:25:75.21:1418,75,0	1/1:2,26:29:75.26:1523,75,0	1/1:1,26:27:72.25:1463,72,0	0/0:23,0:23:66.22:0,66,1071	0/0:21,0:21:60.20:0,60,977	0/0:29,0:29:87.30:0,87,1419	0/0:15,0:15:45.13:0,45,708	0/0:27,0:27:81.28:0,81,1320	1/1:1,42:43:99:2437,120,0	0/0:8,0:8:24.08:0,24,386
chr10	52562482	.	CT	C	1648.20	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.889;DP=795;FS=5.655;HRun=1;HaplotypeScore=73.6316;InbreedingCoeff=0.9996;MQ=67.84;MQ0=0;MQRankSum=-3.250;QD=32.96;ReadPosRankSum=2.977;VQSLOD=3.3151;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,153,2369	0/0:10,0:10:30.10:0,30,479	0/0:32,0:31:90.25:0,90,1351	0/0:27,0:26:77.24:0,77,1130	0/0:30,0:30:90.26:0,90,1364	0/0:19,0:19:57.15:0,57,842	0/0:26,0:26:78.24:0,78,1198	0/0:30,0:30:87.28:0,87,1350	0/0:23,0:23:69.18:0,69,1005	0/0:40,0:40:99:0,120,1840	0/0:26,0:26:78.25:0,78,1218	0/0:27,0:27:81.26:0,81,1271	0/0:22,0:22:66.18:0,66,982	0/0:32,0:32:96.30:0,96,1486	0/0:35,0:35:99:0,105,1580	0/0:32,0:32:96.32:0,96,1512	1/1:0,31:31:78.09:1059,78,0	1/1:0,19:19:51.17:711,51,0	0/0:19,0:19:57.18:0,57,868	0/0:40,0:40:99:0,114,1772	0/0:39,0:39:99:0,117,1800	0/0:21,0:21:60.19:0,60,936	0/0:22,0:22:66.16:0,66,960	0/0:25,0:25:75.26:0,75,1196	0/0:22,0:22:66.23:0,66,1053	0/0:43,0:43:99:0,129,1998	0/0:41,0:41:99:0,123,1877	0/0:11,0:11:33.11:0,33,527
chr10	52563716	.	A	AC	14318.59	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-18.050;DP=740;FS=0.271;HRun=0;HaplotypeScore=68.6355;InbreedingCoeff=0.9997;MQ=83.59;MQ0=0;MQRankSum=-3.317;QD=46.04;ReadPosRankSum=0.001;VQSLOD=4.6838;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,38:38:99:1725,108,0	1/1:0,8:8:24.08:384,24,0	0/0:19,0:20:32.07:0,32,724	0/0:28,0:28:73.79:0,74,988	0/0:19,0:19:57.19:0,57,797	0/0:19,0:19:57.14:0,57,757	0/0:31,0:31:90.28:0,90,1236	1/1:1,38:39:99:1769,111,0	0/0:29,0:29:84.25:0,84,1127	0/0:31,0:31:93.31:0,93,1299	0/0:21,0:21:60.17:0,60,804	0/0:29,0:29:87.28:0,87,1199	0/0:21,0:21:63.21:0,63,876	0/0:29,0:29:81.24:0,81,1113	1/1:0,39:39:99:1870,117,0	1/1:1,32:33:96.33:1534,96,0	1/1:0,15:15:45.15:719,45,0	1/1:0,30:30:87.30:1390,87,0	1/1:0,19:19:57.19:890,57,0	1/1:1,37:39:99:1737,111,0	1/1:0,24:24:63.21:1006,63,0	0/0:23,0:23:66.20:0,66,904	0/0:25,0:25:75.15:0,75,1007	0/0:38,0:38:99:0,108,1488	0/0:17,0:17:42.14:0,42,587	0/0:32,0:32:93.30:0,93,1275	1/1:0,27:27:81.28:1294,81,0	0/0:16,0:16:48.16:0,48,671
chr10	52563763	.	T	TCTTC	8998.08	PASS	AB=0.780;AC=37;AF=0.712;AN=52;BaseQRankSum=-1.409;DP=701;FS=0.000;HRun=0;HaplotypeScore=150.2834;InbreedingCoeff=0.8354;MQ=69.31;MQ0=3;MQRankSum=0.641;QD=17.92;ReadPosRankSum=-2.739;VQSLOD=3.5958;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:27,16:43:75.23:1580,75,0	1/1:6,0:7:8.99:112,9,0	./.	./.	0/0:15,0:15:21.06:0,21,298	0/0:19,0:19:30.08:0,30,433	0/0:22,0:22:27.09:0,27,410	1/1:21,0:21:3.01:34,3,0	0/0:23,0:25:47.51:0,48,655	0/0:32,0:33:48.13:0,48,691	0/0:14,0:14:18.05:0,18,253	1/1:25,0:29:15.79:191,16,0	1/1:13,1:22:12.01:175,12,0	1/1:15,14:31:21.07:476,21,0	1/1:33,0:35:38.66:470,39,0	1/1:33,0:36:17.77:502,18,0	1/1:7,7:16:36.09:770,36,0	1/1:15,8:25:33.11:771,33,0	1/1:11,2:13:9.03:182,9,0	1/1:24,1:25:21.04:327,21,0	1/1:19,17:37:37.22:1246,37,0	1/1:17,0:26:14.23:186,14,0	1/1:24,0:24:12.49:146,12,0	1/1:33,0:39:22.17:237,22,0	1/1:6,13:19:21.07:492,21,0	0/1:23,9:32:99:545,0,274	1/1:12,6:19:24.08:559,24,0	0/0:21,0:22:42.10:0,42,572
chr10	52565853	.	TAC	T	415	PASS	AB=0.880;AC=21;AF=0.457;AN=46;BaseQRankSum=4.508;DP=288;FS=5.288;HRun=0;HaplotypeScore=49.5152;InbreedingCoeff=0.3684;MQ=74.80;MQ0=6;MQRankSum=-0.838;QD=3.58;ReadPosRankSum=1.577;VQSLOD=1.1429;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:4,0:4:2.99:0,3,24	./.	./.	0/1:10,2:12:14.74:15,0,179	0/0:13,0:13:12.04:0,12,170	0/0:6,0:6:9.03:0,9,134	./.	0/1:6,1:7:20.69:21,0,118	0/1:6,2:7:53.45:53,0,59	0/0:8,0:7:6.02:0,6,89	1/1:2,2:4:3.01:33,3,0	1/1:5,5:10:12.03:131,12,0	0/0:8,0:8:15.03:0,15,201	0/1:11,0:11:0:0,0,0	0/0:7,0:7:2.69:0,3,24	0/0:19,0:19:8.64:0,9,60	0/0:11,0:11:9.39:0,9,70	1/1:10,0:13:11.36:56,11,0	1/1:8,0:9:2.84:14,3,0	./.	1/1:2,0:2:2.99:23,3,0	1/1:4,2:6:6.02:65,6,0	1/1:6,3:9:6.02:65,6,0	0/1:11,2:13:8.67:9,0,269	0/0:5,0:4:9.50:0,10,135	1/1:5,0:11:17.04:84,17,0	0/0:5,0:5:12.04:0,12,179
chr10	52565895	.	C	CACATAT	2296.06	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=3.597;DP=337;FS=10.523;HRun=0;HaplotypeScore=77.3200;InbreedingCoeff=0.6503;MQ=58.14;MQ0=14;MQRankSum=-4.888;QD=14.35;ReadPosRankSum=-3.222;VQSLOD=0.4382;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:11:15.05:240,15,0	1/1:3,0:3:3.01:79,3,0	0/0:13,0:5:11.69:0,12,100	0/1:15,0:8:18.12:18,0,47	0/0:19,0:19:42.14:0,42,743	0/0:22,0:22:51.16:0,51,838	0/0:5,0:5:15.05:0,15,266	1/1:30,0:25:72.21:963,72,0	0/0:12,0:11:24.08:0,24,428	0/0:16,0:14:39.06:0,39,646	0/0:9,0:8:24.08:0,24,440	0/0:8,0:8:8.98:0,9,123	0/0:7,0:7:15:0,15,255	0/0:12,0:12:27.05:0,27,441	1/1:10,0:10:5.62:99,6,0	1/1:7,0:7:8.75:93,9,0	1/1:2,22:29:8.87:166,9,0	1/1:2,17:21:10.28:264,10,0	1/1:17,0:16:23.38:403,23,0	1/1:4,0:4:1.72:67,2,0	0/1:3,0:3:1.37:31,0,1	0/0:2,0:2:6.02:0,6,97	0/0:4,0:3:12.03:0,12,182	0/0:3,0:3:6.02:0,6,109	0/0:16,0:15:33.11:0,33,644	0/0:17,0:15:34.89:0,35,654	0/1:10,0:10:29.73:66,0,30	0/0:12,0:12:36.02:0,36,569
chr10	52566169	.	CAT	C	259.63	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.109;DP=354;FS=8.001;HRun=0;HaplotypeScore=39.6444;InbreedingCoeff=0.7156;MQ=72.58;MQ0=0;MQRankSum=-2.207;QD=25.96;ReadPosRankSum=-0.936;VQSLOD=3.4493;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,10:10:24.08:353,24,0	0/0:3,0:3:9.03:0,9,169	0/0:11,0:11:24.46:0,24,356	0/0:3,0:3:9.03:0,9,126	0/0:22,0:22:66.23:0,66,1225	0/0:22,0:22:66.21:0,66,1184	0/0:4,0:4:12.04:0,12,224	0/0:36,0:36:99:0,108,1935	0/0:5,0:5:15.05:0,15,271	0/0:8,0:8:24.08:0,24,446	0/0:19,0:19:51.16:0,51,922	0/0:8,0:8:21.07:0,21,393	0/0:8,0:8:24.08:0,24,449	0/0:14,0:14:36.12:0,36,674	0/0:13,0:13:39.12:0,39,699	0/0:7,0:7:18.06:0,18,337	0/0:23,0:23:69.21:0,69,1213	0/0:16,0:16:48.16:0,48,898	0/0:22,0:22:62.69:0,63,1090	0/0:11,0:11:30.10:0,30,555	0/0:7,0:7:21.05:0,21,361	0/0:1,0:1:3:0,3,25	0/0:5,0:5:15.05:0,15,280	0/0:6,0:6:18.06:0,18,337	0/0:10,0:10:27.09:0,27,499	0/0:13,0:13:36.11:0,36,645	0/0:12,0:12:36.12:0,36,670	0/0:35,0:35:99:0,105,1904
chr10	52566488	.	TTG	T	6706.39	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=14.103;DP=565;FS=1.096;HRun=0;HaplotypeScore=67.2289;InbreedingCoeff=0.9763;MQ=74.16;MQ0=1;MQRankSum=0.567;QD=36.65;ReadPosRankSum=-0.685;VQSLOD=6.1690;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,17:17:45.15:644,45,0	1/1:0,8:8:24.08:344,24,0	0/0:12,0:12:4.31:0,4,461	0/0:8,0:8:17.96:0,18,225	0/0:27,0:27:75.26:0,75,1358	0/0:25,0:25:72.21:0,72,1257	0/0:14,0:14:42.13:0,42,717	1/1:2,30:32:87.23:1172,87,0	0/0:22,0:22:66.23:0,66,1199	0/0:25,0:25:75.26:0,75,1375	0/0:26,0:26:78.27:0,78,1423	0/0:22,0:22:63.21:0,63,1126	0/0:26,0:26:78.25:0,78,1398	0/0:22,0:22:63.20:0,63,1124	1/1:1,22:23:54.18:774,54,0	1/1:2,21:23:57.19:816,57,0	0/0:15,0:15:42.14:0,42,758	0/0:18,0:18:45.15:0,45,822	1/1:4,18:22:57.19:811,57,0	1/1:0,26:25:72.10:942,72,0	1/1:0,11:11:30.10:430,30,0	0/0:19,0:19:54.19:0,54,989	0/0:18,0:18:54.16:0,54,928	0/0:15,0:15:42.14:0,42,769	0/0:18,0:18:54.19:0,54,977	0/0:30,0:30:90.31:0,90,1631	1/1:0,21:21:54.18:774,54,0	0/0:20,0:20:60.21:0,60,1099
chr10	52569582	.	CATGTATGT	C	6123.39	PASS	AC=38;AF=0.760;AN=50;BaseQRankSum=-1.180;DP=661;FS=8.557;HRun=0;HaplotypeScore=192.3187;InbreedingCoeff=0.7623;MQ=59.87;MQ0=13;MQRankSum=-8.723;QD=14.65;ReadPosRankSum=-0.755;VQSLOD=3.2531;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:26:9.03:168,9,0	1/1:6,0:14:9.03:168,9,0	./.	./.	0/0:17,0:32:41.97:0,42,465	0/0:21,0:34:35.69:0,36,321	0/0:18,0:25:11.99:0,12,117	./.	0/0:17,0:28:35.95:0,36,334	1/1:15,17:32:48.58:977,49,0	1/1:11,14:25:36.12:827,36,0	1/1:16,0:24:11.17:222,11,0	1/1:18,0:25:15.05:279,15,0	1/1:11,6:17:6.02:147,6,0	1/1:16,0:29:20.81:391,21,0	1/1:9,0:20:5.91:112,6,0	1/1:20,0:28:6.02:112,6,0	1/1:1,0:1:1.82:5,2,0	1/1:18,3:20:8.99:121,9,0	1/1:16,10:26:22.63:497,23,0	1/1:10,7:17:6.02:148,6,0	1/1:12,0:18:2.79:159,3,0	1/1:15,0:25:15.05:278,15,0	1/1:10,0:15:3.01:56,3,0	1/1:12,8:20:15.05:369,15,0	0/0:17,0:29:39:0,39,404	1/1:15,18:33:45.15:1089,45,0	0/0:9,0:13:11.97:0,12,97
chr10	52572379	.	GA	G	1129.01	PASS	AB=0.941;AC=7;AF=0.125;AN=56;BaseQRankSum=8.027;DP=598;FS=6.992;HRun=10;HaplotypeScore=63.3065;InbreedingCoeff=0.8848;MQ=81.77;MQ0=0;MQRankSum=-0.246;QD=14.66;ReadPosRankSum=1.383;VQSLOD=3.6761;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:16:35.93:0,36,379	1/1:2,7:9:17.99:156,18,0	0/0:19,0:19:25.63:0,26,283	0/1:15,1:16:2.62:3,0,157	0/0:33,1:34:68.41:0,68,949	0/0:23,0:23:63.17:0,63,696	0/0:10,0:11:26.91:0,27,280	0/0:33,0:33:84.14:0,84,885	0/0:22,0:22:60.16:0,60,660	0/0:23,0:25:69:0,69,731	0/0:28,0:28:53.28:0,53,760	0/0:20,0:20:57.15:0,57,631	0/0:17,1:18:25.08:0,25,503	0/0:17,0:17:48.12:0,48,524	1/1:4,20:24:26.80:462,27,0	1/1:2,26:28:74.97:651,75,0	0/0:26,0:26:75.17:0,75,817	0/0:13,0:15:29.91:0,30,313	0/0:12,0:12:33.09:0,33,365	0/0:33,0:34:87.22:0,87,948	0/0:15,0:15:36.10:0,36,398	0/0:22,0:24:59.83:0,60,626	0/0:23,0:24:60:0,60,645	0/0:13,0:13:36.10:0,36,398	0/0:18,0:18:45.12:0,45,498	0/0:29,0:34:80.38:0,80,795	0/0:20,0:20:51.13:0,51,556	0/0:20,0:20:42.09:0,42,455
chr10	52572818	.	AT	A	7915.29	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=15.038;DP=584;FS=8.606;HRun=4;HaplotypeScore=55.8418;InbreedingCoeff=0.9959;MQ=72.86;MQ0=0;MQRankSum=0.297;QD=32.98;ReadPosRankSum=-0.747;VQSLOD=4.7923;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,28:28:78.24:936,78,0	1/1:0,10:10:30.09:360,30,0	0/0:14,0:14:27.04:0,27,330	0/0:6,0:6:15.05:0,15,198	0/0:42,0:42:99:0,117,1623	0/0:14,0:14:42.13:0,42,571	0/0:14,0:14:42.11:0,42,555	1/1:1,32:33:96.28:1141,96,0	0/0:15,0:15:45.15:0,45,630	0/0:40,0:40:99:0,120,1665	0/0:27,0:27:81.27:0,81,1134	0/0:14,0:14:39.12:0,39,531	0/0:20,0:20:60.20:0,60,840	0/0:18,0:18:54.18:0,54,756	1/1:1,24:25:72.22:864,72,0	1/1:0,31:31:87.27:1044,87,0	1/1:1,12:13:33.10:396,33,0	1/1:1,11:12:30.05:344,30,0	1/1:4,8:12:24.05:275,24,0	1/1:1,31:32:90.28:1080,90,0	1/1:0,8:8:21.06:252,21,0	0/0:15,0:15:45.15:0,45,630	0/0:30,0:30:90.30:0,90,1260	0/0:8,0:8:21.07:0,21,294	0/0:23,0:23:66.19:0,66,888	0/0:23,0:23:69.22:0,69,952	1/1:1,35:36:99:1224,102,0	0/0:21,0:21:63.21:0,63,882
chr10	52573184	.	CT	C	10198.71	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=15.350;DP=768;FS=8.400;HRun=3;HaplotypeScore=73.7007;InbreedingCoeff=0.9998;MQ=86.40;MQ0=0;MQRankSum=-2.407;QD=33.66;ReadPosRankSum=1.518;VQSLOD=5.1538;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,36:37:93.29:1153,93,0	1/1:1,10:11:27.08:335,27,0	0/0:23,0:23:67.76:0,68,924	0/0:30,0:30:63.68:0,64,1086	0/0:48,0:48:99:0,144,2071	0/0:29,0:29:87.29:0,87,1252	0/0:28,0:28:84.28:0,84,1198	1/1:0,47:47:99:1673,138,0	0/0:24,0:24:69.22:0,69,971	0/0:42,0:41:99:0,117,1680	0/0:23,0:23:69.23:0,69,978	0/0:19,0:19:57.18:0,57,805	0/0:26,0:26:78.25:0,78,1103	0/0:24,0:24:69.22:0,69,977	1/1:0,22:22:63.20:781,63,0	1/1:2,25:27:72.23:890,72,0	1/1:0,23:23:63.20:779,63,0	1/1:0,18:18:45.14:558,45,0	1/1:2,23:25:69.20:832,69,0	1/1:1,34:35:96.30:1190,96,0	1/1:0,34:34:96.30:1190,96,0	0/0:18,0:18:54.17:0,54,760	0/0:32,0:32:96.29:0,96,1340	0/0:22,0:22:66.22:0,66,947	0/0:23,0:23:63.21:0,63,907	0/0:38,0:38:99:0,111,1562	1/1:0,24:24:66.21:818,66,0	0/0:16,0:16:48.16:0,48,691
chr10	52575674	.	ATTATTTAT	A	897.29	PASS	AB=0.739;AC=9;AF=0.205;AN=44;BaseQRankSum=3.498;DP=277;FS=5.811;HRun=0;HaplotypeScore=66.9872;InbreedingCoeff=0.4938;MQ=59.86;MQ0=3;MQRankSum=-4.767;QD=9.45;ReadPosRankSum=-3.195;VQSLOD=-0.1241;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:6,0:12:6.02:112,6,0	0/0:3,0:4:3.01:0,3,105	./.	./.	0/0:9,0:9:15.04:0,15,515	0/0:6,0:6:12.04:0,12,490	0/0:1,0:1:3.01:0,3,123	1/1:32,7:37:21.04:238,21,0	0/0:9,0:9:6.02:0,6,245	./.	0/0:12,0:12:3.01:0,3,123	./.	0/0:3,0:3:9.01:0,9,240	0/0:9,0:9:15.05:0,15,528	0/0:12,0:14:3.01:0,3,105	0/0:7,0:12:12.04:0,12,419	0/0:12,0:12:1.25:0,1,3	0/1:10,6:17:68.38:68,0,98	1/1:10,5:15:15.05:319,15,0	./.	./.	0/0:6,0:7:3.01:0,3,105	0/0:9,0:9:6.02:0,6,244	0/0:7,0:7:12.04:0,12,433	0/0:6,0:6:9.03:0,9,367	0/0:8,0:8:3.01:0,3,123	1/1:7,5:12:12.04:298,12,0	0/0:19,0:19:18.04:0,18,629
chr10	52577050	.	GT	G	3894.50	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=12.280;DP=674;FS=2.427;HRun=1;HaplotypeScore=79.0823;InbreedingCoeff=0.9923;MQ=83.61;MQ0=0;MQRankSum=-2.262;QD=38.18;ReadPosRankSum=3.021;VQSLOD=4.4298;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,102,1607	1/1:0,8:8:24.08:335,24,0	0/0:22,0:22:66.22:0,66,1046	0/0:17,0:17:51.17:0,51,807	0/0:24,0:24:72.23:0,72,1128	0/0:31,0:31:93.30:0,93,1458	0/0:13,0:13:39.13:0,39,624	0/0:40,0:40:99:0,120,1814	0/0:30,0:30:90.31:0,90,1436	0/0:29,0:29:87.30:0,87,1391	0/0:26,0:26:78.24:0,78,1202	0/0:21,0:21:63.21:0,63,1003	0/0:14,0:14:42.14:0,42,671	0/0:28,0:28:84.29:0,84,1343	1/1:0,21:21:60.20:839,60,0	1/1:1,28:29:36.31:1085,36,0	1/1:0,26:26:69.23:965,69,0	1/1:0,18:18:48.16:671,48,0	0/0:26,0:26:78.22:0,78,1156	0/0:40,0:40:99:0,120,1843	0/0:19,0:19:57.19:0,57,911	0/0:18,0:18:54.18:0,54,863	0/0:30,0:30:90.29:0,90,1414	0/0:12,0:12:36.12:0,36,575	0/0:29,0:29:87.30:0,87,1388	0/0:34,0:34:99:0,102,1609	0/0:29,0:29:87.30:0,87,1390	0/0:4,0:4:12.04:0,12,192
chr10	52577269	.	CCCTT	C	1021.53	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.647;DP=522;FS=0.857;HRun=0;HaplotypeScore=87.6367;InbreedingCoeff=0.9905;MQ=79.48;MQ0=1;MQRankSum=-2.168;QD=42.56;ReadPosRankSum=1.908;VQSLOD=4.1356;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,23:24:60.21:1116,60,0	0/0:8,0:8:21.07:0,21,562	0/0:18,0:18:42.13:0,42,923	0/0:13,0:13:30.10:0,30,657	0/0:34,0:34:99:0,99,2591	0/0:21,0:21:63.20:0,63,1637	0/0:8,0:8:24.07:0,24,589	0/0:22,0:22:66.23:0,66,1720	0/0:18,0:18:51.18:0,51,1341	0/0:16,0:16:48.16:0,48,1272	0/0:28,0:28:81.28:0,81,2161	0/0:20,0:20:57.20:0,57,1507	0/0:21,0:21:60.21:0,60,1553	0/0:18,0:18:48.15:0,48,1209	0/0:17,0:17:51.18:0,51,1372	0/0:25,0:25:75.26:0,75,1971	0/0:21,0:21:60.18:0,60,1543	0/0:17,0:17:45.15:0,45,1206	0/0:12,0:12:36.12:0,36,945	0/0:31,0:31:90.31:0,90,2338	0/0:11,0:10:30.10:0,30,803	0/0:11,0:11:33.11:0,33,860	0/0:16,0:16:48.16:0,48,1289	0/0:8,0:8:24.08:0,24,638	0/0:15,0:15:42.14:0,42,1134	0/0:28,0:28:84.29:0,84,2264	0/0:25,0:25:69.24:0,69,1827	0/0:16,0:16:48.16:0,48,1296
chr10	52577297	.	A	AAT	1547.10	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-8.300;DP=531;FS=5.314;HRun=0;HaplotypeScore=66.2315;InbreedingCoeff=0.9817;MQ=70.43;MQ0=0;MQRankSum=-1.531;QD=38.68;ReadPosRankSum=1.400;VQSLOD=5.6759;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:60.19:0,60,761	0/0:7,0:7:18.06:0,18,229	0/0:13,0:13:35.84:0,36,409	0/0:11,0:11:15.05:0,15,184	0/0:39,0:39:99:0,111,1412	0/0:18,0:18:51.16:0,51,648	0/0:9,0:9:24.08:0,24,306	0/0:23,0:22:63.18:0,63,776	0/0:17,0:17:45.10:0,45,533	0/0:19,0:19:54.17:0,54,688	0/0:27,0:27:69.22:0,69,875	0/0:24,0:24:66.20:0,66,826	0/0:22,0:22:66.21:0,66,839	0/0:13,0:13:39.11:0,39,482	0/0:15,0:14:33.11:0,33,420	0/0:23,0:23:60.18:0,60,750	1/1:2,23:25:31.04:1066,31,0	1/1:1,14:15:36.12:603,36,0	0/0:13,0:13:36.12:0,36,457	0/0:36,0:36:93.30:0,93,1184	0/0:10,0:10:24.08:0,24,306	0/0:13,0:13:33.07:0,33,380	0/0:14,0:14:39.10:0,39,479	0/0:7,0:7:21.07:0,21,267	0/0:24,0:24:69.22:0,69,877	0/0:31,0:31:78.25:0,78,992	0/0:29,0:29:81.24:0,81,1005	0/0:10,0:10:23.14:0,23,338
chr10	52577659	.	C	CT	2334.02	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-11.302;DP=662;FS=7.780;HRun=7;HaplotypeScore=61.6633;InbreedingCoeff=0.9949;MQ=83.28;MQ0=0;MQRankSum=-4.586;QD=27.14;ReadPosRankSum=3.671;VQSLOD=4.3185;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:78.09:0,78,746	1/1:1,5:6:15.05:181,15,0	0/0:33,0:32:57.07:0,57,544	0/0:23,0:23:31.57:0,32,303	0/0:39,0:39:99:0,99,949	0/0:33,0:33:84.10:0,84,799	0/0:15,0:15:36.81:0,37,392	0/0:32,0:32:75.10:0,75,718	0/0:17,0:17:39.03:0,39,370	0/0:21,0:21:57.07:0,57,541	0/0:30,0:30:84.12:0,84,806	0/0:28,0:28:81.13:0,81,782	0/0:25,0:25:69.03:0,69,643	0/0:22,0:22:63.09:0,63,603	1/1:3,19:22:54.17:652,54,0	1/1:2,26:28:46.25:841,46,0	1/1:3,18:21:48.15:580,48,0	1/1:1,8:9:21.06:254,21,0	0/0:21,0:21:54.03:0,54,504	0/0:30,0:30:87.14:0,87,840	0/0:33,0:33:87.11:0,87,834	0/0:19,0:19:51.05:0,51,482	0/0:30,0:30:84.13:0,84,811	0/0:14,0:14:36.05:0,36,348	0/0:14,0:14:39.06:0,39,377	0/0:25,0:25:69.09:0,69,657	0/0:28,0:28:78.11:0,78,748	0/0:10,0:10:27.04:0,27,261
chr10	52578959	.	T	TAATC	9049.69	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-13.431;DP=448;FS=6.329;HRun=0;HaplotypeScore=60.0666;InbreedingCoeff=0.9757;MQ=71.82;MQ0=5;MQRankSum=-1.307;QD=45.25;ReadPosRankSum=0.778;VQSLOD=4.7362;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,11:12:27.09:701,27,0	1/1:1,6:6:12.04:307,12,0	0/0:10,0:9:18.04:0,18,248	0/0:7,0:7:12.45:0,12,163	0/0:25,0:25:72.21:0,72,1181	0/0:12,0:12:27.09:0,27,485	0/0:9,0:9:27.08:0,27,452	1/1:3,25:29:75.19:1520,75,0	0/0:19,0:19:42.09:0,42,656	0/0:17,0:17:42.14:0,42,730	0/0:23,0:23:63.20:0,63,1066	0/0:12,0:12:36.12:0,36,642	0/0:19,0:19:45.15:0,45,781	0/0:16,0:16:45.13:0,45,753	1/1:3,14:16:30.10:779,30,0	1/1:4,15:18:30.10:779,30,0	1/1:1,10:12:18.06:467,18,0	1/1:3,13:15:15.05:390,15,0	1/1:3,14:17:42.10:863,42,0	1/1:2,24:25:51.05:1164,51,0	1/1:1,13:14:30.10:779,30,0	0/0:8,0:8:15.04:0,15,244	0/0:13,0:13:36.12:0,36,642	0/0:3,0:3:9.03:0,9,162	0/0:21,0:21:57.17:0,57,944	0/0:23,0:23:57.18:0,57,972	1/1:5,22:28:51.17:1301,51,0	0/0:11,0:11:33.11:0,33,593
chr10	52579435	.	AT	A	8715.31	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=14.696;DP=636;FS=2.984;HRun=2;HaplotypeScore=58.6499;InbreedingCoeff=0.9696;MQ=88.50;MQ0=0;MQRankSum=-1.278;QD=35.57;ReadPosRankSum=1.821;VQSLOD=5.4312;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,14:14:36.12:467,36,0	1/1:0,9:9:27.09:351,27,0	0/0:23,0:23:66.21:0,66,945	0/0:22,0:22:60.16:0,60,842	0/0:29,0:29:84.27:0,84,1239	0/0:26,0:26:78.26:0,78,1169	0/0:18,0:18:54.18:0,54,804	1/1:0,38:38:99:1480,114,0	0/0:15,0:15:45.15:0,45,674	0/0:31,0:31:87.29:0,87,1303	0/0:30,0:30:87.26:0,87,1237	0/0:18,0:18:54.17:0,54,788	0/0:32,0:32:96.28:0,96,1388	0/0:21,0:21:63.19:0,63,901	1/1:0,30:30:81.26:1052,81,0	1/1:0,16:16:48.16:623,48,0	1/1:0,24:24:69.22:896,69,0	1/1:1,11:12:1.74:250,2,0	1/1:1,22:23:66.19:831,66,0	1/1:1,22:23:57.19:740,57,0	1/1:1,24:25:69.22:896,69,0	0/0:18,0:18:54.17:0,54,786	0/0:25,0:25:75.25:0,75,1122	0/0:12,0:12:36.12:0,36,540	0/0:21,0:21:63.21:0,63,944	0/0:31,0:31:93.31:0,93,1371	1/1:1,30:31:87.28:1130,87,0	0/0:19,0:19:54.15:0,54,768
chr10	52582397	.	TGTCGTCGTCGTCGTCGTCGTCGTCGTCGTCGTC	T	3762.77	PASS	AB=1.000;AC=18;AF=0.333;AN=54;BaseQRankSum=7.145;DP=476;FS=14.182;HRun=0;HaplotypeScore=358.6455;InbreedingCoeff=0.5916;MQ=71.65;MQ0=2;MQRankSum=-6.667;QD=19.30;ReadPosRankSum=-0.843;VQSLOD=0.6406;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:30:33.07:1080,33,0	1/1:3,0:3:3.01:57,3,0	0/0:13,0:12:2.14:0,2,112	0/0:14,0:14:2.98:0,3,22	0/0:12,0:12:9.01:0,9,263	0/0:13,0:12:9.01:0,9,206	0/0:36,0:32:44.48:0,44,2352	1/1:26,9:35:24.03:430,24,0	0/0:23,0:23:36.11:0,36,2119	0/0:16,0:16:15.04:0,15,315	0/0:11,0:11:9.01:0,9,359	0/0:11,0:11:14.79:0,15,348	0/0:17,0:16:12.02:0,12,312	0/0:14,0:14:21.05:0,21,1109	0/1:18,0:18:18.19:320,0,18	0/1:21,0:21:95.49:261,0,95	1/1:23,0:20:8.96:115,9,0	1/1:10,0:10:18:581,18,0	1/1:10,4:14:12.03:357,12,0	./.	1/1:27,0:24:3.01:50,3,0	0/0:12,0:12:18.04:0,18,363	0/0:11,0:11:3.01:0,3,73	0/0:21,0:17:19.42:0,19,609	0/0:14,0:14:9.03:0,9,356	0/0:21,0:21:9.03:0,9,364	1/1:12,0:12:9.03:512,9,0	0/0:5,0:5:3.01:0,3,183
chr10	52584217	.	G	GA	1335.39	PASS	AB=0.873;AC=17;AF=0.304;AN=56;BaseQRankSum=13.077;DP=549;FS=81.362;HRun=0;HaplotypeScore=123.9263;InbreedingCoeff=-0.4058;MQ=42.37;MQ0=1;MQRankSum=-5.789;QD=3.92;ReadPosRankSum=1.354;VQSLOD=-0.0426;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:36,8:44:99:402,0,801	0/1:13,1:14:16.63:17,0,335	0/0:21,0:10:30.07:0,30,370	0/0:26,0:11:27.09:0,27,375	0/1:14,1:15:2.42:2,0,384	0/0:19,1:20:15.14:0,15,623	0/1:20,1:21:59.47:59,0,432	0/1:22,5:24:99:134,0,568	0/0:7,1:8:14.65:0,15,284	0/1:13,4:17:99:130,0,450	0/0:9,0:9:24.01:0,24,279	0/0:15,1:16:12.89:0,13,534	0/0:20,1:21:33.54:0,34,763	0/0:15,1:16:30.99:0,31,566	0/0:30,6:35:43.24:0,43,1143	0/1:18,4:22:9.12:9,0,622	0/1:13,3:16:99:147,0,354	0/1:11,2:14:12.06:12,0,393	0/1:20,3:23:99:135,0,564	0/1:21,7:28:99:146,0,650	0/1:21,17:38:99:186,0,362	0/0:17,1:18:7.81:0,8,605	0/1:12,1:14:40.46:40,0,343	0/0:14,1:15:33.07:0,33,438	0/1:15,2:16:3.99:4,0,461	0/1:12,1:13:5.93:6,0,455	0/1:11,1:12:45.51:46,0,324	0/1:6,0:6:12.26:12,0,191
chr10	52586074	.	TTCTG	T	2817.71	PASS	AB=0.711;AC=21;AF=0.375;AN=56;BaseQRankSum=8.012;DP=657;FS=6.827;HRun=0;HaplotypeScore=108.4866;InbreedingCoeff=0.7688;MQ=64.51;MQ0=3;MQRankSum=1.455;QD=10.40;ReadPosRankSum=-0.663;VQSLOD=2.2814;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:23,3:26:49.20:537,49,0	1/1:1,7:8:3.01:51,3,0	0/0:33,0:26:41.97:0,42,622	0/0:39,0:27:35.89:0,36,418	0/0:22,0:22:57.11:0,57,1124	0/0:16,0:16:27.08:0,27,542	0/0:26,0:26:54.17:0,54,1195	1/1:32,0:32:42.20:378,42,0	0/0:21,0:21:51.12:0,51,1018	0/0:28,0:28:66.19:0,66,1318	0/0:10,0:10:24.08:0,24,545	0/1:24,0:24:2.02:2,0,797	0/0:25,0:25:63.16:0,63,1296	0/0:32,0:32:72.19:0,72,1517	1/1:7,15:22:11.83:201,12,0	1/1:6,22:28:27.56:456,28,0	1/1:3,17:20:27.09:456,27,0	0/1:2,9:11:36.21:92,0,36	1/1:11,11:22:35.97:378,36,0	1/1:11,13:24:17.79:169,18,0	1/1:10,23:33:18.06:293,18,0	0/0:20,0:20:53.97:0,54,1072	0/0:14,0:14:36.07:0,36,661	0/0:39,0:39:98.96:0,99,2132	0/0:23,0:23:50.48:0,50,1123	0/0:17,0:17:42.13:0,42,856	0/1:6,15:21:13:13,0,16	0/0:21,0:21:57.06:0,57,1001
chr10	52586103	.	CCTGA	C	1576.92	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=8.956;DP=606;FS=0.000;HRun=0;HaplotypeScore=105.0208;InbreedingCoeff=0.8421;MQ=58.71;MQ0=7;MQRankSum=1.734;QD=9.86;ReadPosRankSum=-1.585;VQSLOD=2.6377;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:34,0:34:59.48:600,59,0	0/0:7,0:7:3:0,3,25	0/0:30,0:18:31.54:0,32,369	0/0:36,0:22:23.62:0,24,366	0/0:21,0:21:51.02:0,51,680	0/0:11,0:11:24.04:0,24,418	0/0:27,0:27:69.12:0,69,1135	1/1:11,10:21:16.97:131,17,0	0/0:20,0:20:54.12:0,54,912	0/0:23,0:23:48.02:0,48,833	0/0:10,0:10:24.08:0,24,556	0/0:23,0:23:48.84:0,49,765	0/0:20,0:20:53.40:0,53,834	0/0:27,0:27:75.15:0,75,1335	0/1:17,0:17:9.44:9,0,66	0/0:30,0:30:32.61:0,33,477	0/0:26,0:26:14.86:0,15,394	0/0:13,0:13:12.26:0,12,217	1/1:18,0:13:27.01:300,27,0	1/1:18,0:18:26.62:251,27,0	1/1:30,0:29:27.05:357,27,0	0/0:20,0:20:56.98:0,57,903	0/0:12,0:12:26.98:0,27,466	0/0:41,0:41:99:0,108,2059	0/0:21,1:22:4.94:0,5,740	0/0:15,0:15:39.09:0,39,640	1/1:22,0:22:17.49:116,17,0	0/0:12,0:12:36.11:0,36,832
chr10	52587686	.	A	AGT	1670.49	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-8.042;DP=776;FS=0.649;HRun=0;HaplotypeScore=93.6433;InbreedingCoeff=0.9982;MQ=86.63;MQ0=0;MQRankSum=-2.834;QD=37.97;ReadPosRankSum=1.888;VQSLOD=5.5233;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,36:44:99:1765,102,0	0/0:13,0:13:36.12:0,36,479	0/0:25,0:25:60.19:0,60,766	0/0:30,0:31:83.97:0,84,1071	0/0:30,0:30:81.26:0,81,1073	0/0:12,0:12:30.10:0,30,399	0/0:37,0:37:96.27:0,96,1241	0/0:27,0:27:66.22:0,66,878	0/0:25,0:25:63.21:0,63,839	0/0:28,0:28:72.24:0,72,957	0/0:17,0:17:48.16:0,48,638	0/0:31,0:31:90.30:0,90,1199	0/0:18,0:18:42.14:0,42,559	0/0:23,0:23:66.22:0,66,878	0/0:43,0:43:99:0,120,1598	0/0:35,0:35:96.31:0,96,1278	0/0:38,0:38:99:0,102,1342	0/0:17,0:17:45.15:0,45,599	0/0:14,0:14:27.09:0,27,360	0/0:32,0:32:93.29:0,93,1223	0/0:54,0:54:99:0,154,2032	0/0:22,0:22:57.19:0,57,759	0/0:32,0:32:90.30:0,90,1199	0/0:32,0:32:84.24:0,84,1087	0/0:22,0:22:60.20:0,60,799	0/0:31,0:31:87.29:0,87,1158	0/0:31,0:31:90.30:0,90,1198	0/0:12,0:12:36.12:0,36,479
chr10	52588867	.	T	TA	575.80	PASS	AB=0.569;AC=5;AF=0.096;AN=52;BaseQRankSum=-4.881;DP=713;FS=4.877;HRun=1;HaplotypeScore=53.2301;InbreedingCoeff=0.7304;MQ=23.91;MQ0=325;MQRankSum=-0.186;QD=8.34;ReadPosRankSum=-1.213;VQSLOD=0.5417;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:18:33.11:0,33,428	1/1:3,10:7:9.03:135,9,0	./.	./.	0/0:34,0:19:42.14:0,42,544	0/0:24,0:15:36.12:0,36,467	0/0:18,0:7:15.05:0,15,194	0/0:11,0:10:24.03:0,24,289	0/0:18,0:10:21.07:0,21,272	0/0:44,0:16:45.15:0,45,584	0/0:24,0:10:27.09:0,27,350	0/0:22,0:17:42.14:0,42,544	0/0:23,0:14:39.13:0,39,505	0/0:25,0:14:33.11:0,33,426	0/1:7,22:20:51:203,0,51	1/1:8,19:12:24.08:359,24,0	0/0:33,0:12:27.09:0,27,349	0/0:25,0:11:15.05:0,15,193	0/0:32,0:21:60.15:0,60,759	0/0:41,0:15:45.15:0,45,581	0/0:14,0:7:18.06:0,18,232	0/0:31,0:15:42.14:0,42,544	0/0:28,0:13:26.77:0,27,349	0/0:23,0:14:33.11:0,33,427	0/0:22,0:11:33.11:0,33,428	0/0:40,0:19:51.07:0,51,607	0/0:60,0:30:84.27:0,84,1085	0/0:16,0:9:24.08:0,24,311
chr10	52590273	.	T	TA	5017.25	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-7.863;DP=350;FS=25.247;HRun=7;HaplotypeScore=31.3413;InbreedingCoeff=0.9614;MQ=63.70;MQ0=1;MQRankSum=-1.244;QD=31.16;ReadPosRankSum=0.404;VQSLOD=2.7730;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,9:9:27.08:325,27,0	1/1:0,5:5:15.05:181,15,0	0/0:7,0:5:10.07:0,10,111	0/0:3,0:2:3:0,3,29	0/0:21,0:21:60.06:0,60,567	0/0:22,0:21:63.10:0,63,608	0/0:8,0:8:21.02:0,21,197	1/1:5,32:37:93.19:1075,93,0	0/0:8,0:8:24.04:0,24,232	0/0:12,0:12:30.05:0,30,290	0/0:19,0:19:57.09:0,57,550	0/0:8,0:8:24.04:0,24,231	0/0:11,0:11:30.05:0,30,290	0/0:12,0:12:33.02:0,33,308	1/1:1,10:11:30.09:362,30,0	1/1:1,7:8:21.06:253,21,0	1/1:0,12:12:33.10:397,33,0	1/1:2,14:16:42.13:506,42,0	1/1:3,9:11:27.08:326,27,0	1/1:0,19:19:48.15:580,48,0	1/1:0,15:15:39.12:471,39,0	0/0:7,0:7:20.83:0,21,187	0/0:7,0:7:18.03:0,18,174	0/0:11,0:11:33.05:0,33,319	0/0:8,0:8:21.03:0,21,203	0/0:9,0:9:27.04:0,27,260	1/1:0,17:17:45.14:542,45,0	0/0:16,0:16:48.08:0,48,463
chr10	52591916	.	GA	G	4904.31	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=12.666;DP=710;FS=15.526;HRun=2;HaplotypeScore=75.5343;InbreedingCoeff=0.9995;MQ=86.01;MQ0=0;MQRankSum=-2.245;QD=34.30;ReadPosRankSum=0.871;VQSLOD=3.4641;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,27:27:72.23:934,72,0	0/0:11,0:11:33.10:0,33,475	0/0:32,0:32:93.28:0,93,1316	0/0:25,0:24:63.17:0,63,850	0/0:18,0:18:48.16:0,48,717	0/0:24,0:24:72.22:0,72,1038	0/0:32,0:32:96.29:0,96,1394	1/1:0,21:21:63.15:760,63,0	0/0:29,0:29:87.29:0,87,1302	0/0:29,0:29:78.25:0,78,1123	0/0:26,0:26:69.23:0,69,1031	0/0:24,0:24:72.23:0,72,1048	0/0:26,0:26:78.26:0,78,1163	0/0:25,0:25:75.18:0,75,1078	0/0:30,0:30:87.29:0,87,1302	0/0:33,0:33:99:0,99,1443	0/0:32,0:32:93.30:0,93,1372	0/0:21,0:21:63.18:0,63,902	1/1:2,20:22:62.86:719,63,0	1/1:0,25:25:63.19:817,63,0	1/1:0,21:21:51.17:662,51,0	0/0:22,0:22:66.22:0,66,987	0/0:24,0:24:68.94:0,69,1014	0/0:41,0:41:99:0,123,1822	0/0:21,0:21:63.20:0,63,924	0/0:33,0:33:99:0,99,1466	1/1:0,27:27:78.25:1012,78,0	0/0:9,0:9:24.05:0,24,336
chr10	52595092	.	G	GA	4149.86	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-13.756;DP=699;FS=8.097;HRun=8;HaplotypeScore=66.1379;InbreedingCoeff=0.9988;MQ=69.19;MQ0=0;MQRankSum=0.473;QD=27.67;ReadPosRankSum=-1.705;VQSLOD=3.4612;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:75.89:0,76,682	0/0:12,0:12:30.01:0,30,275	0/0:19,0:19:36.23:0,36,316	0/0:15,0:15:33:0,33,299	0/0:26,0:26:69.04:0,69,632	0/0:23,0:22:57.02:0,57,521	0/0:25,0:25:75.04:0,75,686	1/1:6,24:30:72.19:811,72,0	0/0:25,0:25:59.77:0,60,595	0/0:25,0:25:66.03:0,66,603	0/0:23,0:23:66.04:0,66,604	0/0:29,0:29:81.04:0,81,741	0/0:25,0:25:63:0,63,571	0/0:24,0:24:69.04:0,69,631	0/0:35,0:35:90.03:0,90,823	0/0:31,0:31:84.04:0,84,769	0/0:19,0:19:42.01:0,42,384	0/0:32,0:32:84.92:0,85,771	1/1:3,19:22:57.16:647,57,0	1/1:3,28:31:84.14:927,84,0	1/1:7,23:30:63.19:727,63,0	0/0:24,0:24:66.02:0,66,599	0/0:23,0:23:66.03:0,66,604	0/0:18,0:18:51.03:0,51,467	0/0:24,0:24:63.03:0,63,576	0/0:36,0:36:96.04:0,96,878	1/1:3,34:37:90.27:1038,90,0	0/0:7,0:7:21.01:0,21,192
chr10	52595430	.	A	ACC	11919.53	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-17.013;DP=780;FS=0.622;HRun=0;HaplotypeScore=87.5624;InbreedingCoeff=0.9968;MQ=87.30;MQ0=0;MQRankSum=-5.989;QD=53.45;ReadPosRankSum=-1.299;VQSLOD=4.7674;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,67:70:99:3980,199,0	0/0:17,0:17:51.17:0,51,832	0/0:30,0:30:82.16:0,82,1303	0/0:24,0:24:69.23:0,69,1084	0/0:25,0:25:75.24:0,75,1197	0/0:19,0:19:57.19:0,57,925	0/0:29,0:29:87.28:0,87,1391	1/1:5,22:29:72.23:1364,72,0	0/0:23,0:23:66.21:0,66,1049	0/0:38,0:38:99:0,111,1768	0/0:28,0:28:84.25:0,84,1328	0/0:31,0:31:90.29:0,90,1443	0/0:21,0:21:63.19:0,63,998	0/0:23,0:23:69.21:0,69,1078	0/0:38,0:38:99:0,114,1859	0/0:25,0:25:72.23:0,72,1146	0/0:23,0:23:69.22:0,69,1101	0/0:23,0:23:63.22:0,63,1024	1/1:2,19:23:66.20:1242,66,0	1/1:1,37:39:99:1983,105,0	1/1:1,31:32:84.29:1706,84,0	0/0:29,0:29:84.27:0,84,1347	0/0:39,0:39:99:0,117,1885	0/0:20,0:20:60.16:0,60,947	0/0:27,0:27:81.27:0,81,1298	0/0:20,0:20:60.20:0,60,979	1/1:0,28:30:81.28:1644,81,0	0/0:5,0:5:15.05:0,15,245
chr10	52595740	.	T	TCA	15968.74	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-15.844;DP=727;FS=6.222;HRun=0;HaplotypeScore=88.8443;InbreedingCoeff=0.9994;MQ=78.51;MQ0=0;MQRankSum=-5.640;QD=54.50;ReadPosRankSum=1.433;VQSLOD=5.0170;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,29:31:87.27:1767,87,0	1/1:3,17:20:54.19:1096,54,0	0/0:26,0:26:75.24:0,75,1169	0/0:21,0:21:63.18:0,63,913	0/0:32,0:32:93.30:0,93,1478	0/0:20,0:20:60.20:0,60,979	0/0:23,0:23:69.22:0,69,1099	1/1:3,34:40:99:2275,120,0	0/0:25,0:25:75.26:0,75,1221	0/0:30,0:30:84.29:0,84,1370	0/0:24,0:24:72.25:0,72,1163	0/0:28,0:28:84.29:0,84,1359	0/0:24,0:24:69.23:0,69,1095	0/0:33,0:33:99:0,99,1582	1/1:5,22:27:69.22:1400,69,0	1/1:3,27:30:72.24:1462,72,0	1/1:1,21:22:63.22:1279,63,0	1/1:0,13:12:39.13:785,39,0	1/1:4,13:17:48.16:947,48,0	1/1:4,31:35:93.26:1888,93,0	1/1:0,23:23:63.22:1279,63,0	0/0:29,0:29:81.28:0,81,1315	0/0:28,0:28:84.29:0,84,1363	0/0:15,0:14:42.14:0,42,670	0/0:27,0:27:81.28:0,81,1319	0/0:42,0:42:99:0,126,2002	1/1:7,26:34:90.29:1789,90,0	0/0:7,0:7:21.07:0,21,343
chr10	52595821	.	T	TTGGGAA	24209.05	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-6.921;DP=772;FS=10.957;HRun=0;HaplotypeScore=156.8943;InbreedingCoeff=0.9988;MQ=65.47;MQ0=0;MQRankSum=-19.933;QD=84.94;ReadPosRankSum=-4.734;VQSLOD=4.3553;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,11:21:51.07:1304,51,0	1/1:4,15:19:54.14:1688,54,0	0/0:25,0:25:60.09:0,60,1291	0/0:25,0:25:66.23:0,66,1499	0/0:42,0:42:99:0,120,2643	0/0:34,0:33:99:0,99,2168	0/0:20,0:20:54.19:0,54,1258	1/1:14,23:39:99:3477,108,0	0/0:22,0:22:63.20:0,63,1387	0/0:42,0:41:99:0,114,2518	0/0:32,0:32:87.30:0,87,2008	0/0:29,0:29:78.25:0,78,1772	0/0:31,0:31:93.32:0,93,2149	0/0:36,0:36:99:0,102,2292	1/1:15,26:43:99:3667,114,0	1/1:9,20:29:87.26:2761,87,0	1/1:6,6:12:33.11:951,33,0	1/1:1,5:7:18.06:510,18,0	1/1:8,11:23:60.21:1992,60,0	1/1:10,22:32:96.29:2965,96,0	1/1:8,6:14:36.08:950,36,0	0/0:25,0:25:72.25:0,72,1679	0/0:21,0:21:57.20:0,57,1288	0/0:20,0:20:60.21:0,60,1396	0/0:32,0:32:84.29:0,84,1919	0/0:37,0:37:93.31:0,93,2085	1/1:8,35:46:99:3945,123,0	0/0:14,0:14:42.14:0,42,936
chr10	52597984	.	T	TG	923.83	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=2.101;DP=492;FS=0.000;HRun=5;HaplotypeScore=62.3921;InbreedingCoeff=0.9743;MQ=81.98;MQ0=0;MQRankSum=-3.504;QD=28.87;ReadPosRankSum=0.852;VQSLOD=3.9045;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:26.28:0,26,151	1/1:0,6:6:15.05:190,15,0	0/0:16,0:16:44.85:0,45,427	0/0:12,0:12:13.77:0,14,242	0/0:26,0:26:69.13:0,69,715	0/0:17,0:18:53.15:0,53,543	0/0:10,0:10:30.07:0,30,315	0/0:39,0:39:40.89:0,41,412	0/0:16,0:16:42.10:0,42,443	0/0:26,0:26:75.18:0,75,799	0/0:30,0:30:81.15:0,81,842	0/0:13,0:13:33.08:0,33,348	0/0:20,0:20:51.12:0,51,546	0/0:18,0:18:48.11:0,48,508	1/1:0,17:17:51.16:644,51,0	1/1:1,8:9:18.06:229,18,0	0/0:21,0:21:56.03:0,56,327	0/0:7,0:7:20.48:0,20,122	0/0:19,0:18:51.19:0,51,283	0/0:20,0:20:52.78:0,53,315	0/0:7,0:7:14.59:0,15,84	0/0:13,0:13:36.07:0,36,372	0/0:12,0:12:27.07:0,27,289	0/0:8,0:8:24.06:0,24,257	0/0:25,0:25:75.18:0,75,798	0/0:21,0:21:60.14:0,60,637	0/0:38,0:38:99:0,100,619	0/0:14,0:14:42.11:0,42,448
chr10	52598392	.	C	CGTCA	16686.38	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-8.649;DP=691;FS=20.175;HRun=0;HaplotypeScore=106.9794;InbreedingCoeff=0.9988;MQ=92.28;MQ0=0;MQRankSum=-7.518;QD=64.68;ReadPosRankSum=-0.583;VQSLOD=4.8765;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,31:34:81.03:2098,81,0	1/1:0,8:8:21.07:558,21,0	0/0:23,0:23:63.13:0,63,1110	0/0:36,0:36:75.76:0,76,1512	0/0:43,0:43:99:0,123,2258	0/0:21,0:21:57.20:0,57,1055	0/0:22,0:22:60.21:0,60,1095	1/1:4,29:34:99:2506,102,0	0/0:26,0:26:75.26:0,75,1369	0/0:32,0:32:93.30:0,93,1672	0/0:23,0:23:66.23:0,66,1221	0/0:33,0:33:90.31:0,90,1659	0/0:16,0:16:45.14:0,45,780	0/0:31,0:31:90.31:0,90,1679	1/1:2,21:23:45.15:1190,45,0	1/1:1,26:27:72.24:1918,72,0	1/1:3,16:19:36.12:958,36,0	1/1:0,8:8:21.07:560,21,0	1/1:5,15:20:57.17:1332,57,0	1/1:2,30:34:81.28:2157,81,0	1/1:1,20:21:57.20:1518,57,0	0/0:27,0:27:75.24:0,75,1355	0/0:15,0:15:42.14:0,42,783	0/0:19,0:19:54.19:0,54,1008	0/0:28,0:28:75.21:0,75,1333	0/0:27,0:27:78.22:0,78,1419	1/1:4,26:30:72.25:1890,72,0	0/0:11,0:11:33.11:0,33,553
chr10	52599807	.	G	GC	970.76	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-6.652;DP=676;FS=2.536;HRun=5;HaplotypeScore=65.3286;InbreedingCoeff=0.9047;MQ=70.78;MQ0=0;MQRankSum=-3.461;QD=29.42;ReadPosRankSum=2.057;VQSLOD=4.2969;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,32:33:81.26:1066,81,0	0/0:11,0:11:33.08:0,33,354	0/0:18,0:17:33.06:0,33,342	0/0:21,0:21:48.58:0,49,510	0/0:31,0:31:84.20:0,84,897	0/0:21,0:21:60.05:0,60,617	0/0:31,0:31:84.20:0,84,896	0/0:30,0:30:66.11:0,66,688	0/0:13,0:13:36.09:0,36,387	0/0:25,0:25:68.91:0,69,697	0/0:21,0:21:57.12:0,57,603	0/0:26,0:26:72.18:0,72,774	0/0:23,0:23:66.15:0,66,700	0/0:19,0:19:51.09:0,51,535	0/0:32,0:32:81.16:0,81,852	0/0:29,0:29:84.21:0,84,903	0/0:27,0:27:81.15:0,81,850	0/0:19,0:19:51.12:0,51,541	0/0:19,0:19:48.12:0,48,516	0/0:30,0:30:78.10:0,78,805	0/0:33,0:33:90.21:0,90,960	0/0:18,0:18:48.12:0,48,515	0/0:24,0:24:63.16:0,63,676	0/0:38,0:38:99:0,114,1213	0/0:22,0:22:63.13:0,63,667	0/0:28,0:28:75.19:0,75,806	0/0:31,0:31:84.19:0,84,895	0/0:3,0:3:6.01:0,6,64
chr10	52600815	.	A	AGAGAG	1811	PASS	AB=0.771;AC=7;AF=0.125;AN=56;BaseQRankSum=-4.347;DP=516;FS=6.061;HRun=0;HaplotypeScore=127.6018;InbreedingCoeff=0.3285;MQ=61.55;MQ0=8;MQRankSum=-1.025;QD=14.26;ReadPosRankSum=-0.881;VQSLOD=2.7839;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:45.97:0,46,793	0/0:4,0:4:8.24:0,8,100	0/0:33,0:13:35.38:0,35,526	0/0:20,0:13:25.92:0,26,272	0/0:22,0:22:51.61:0,52,1058	0/0:19,0:19:34.67:0,35,690	0/0:13,0:13:22.43:0,22,401	0/1:31,17:48:68.30:1121,0,68	0/0:7,0:7:6.90:0,7,91	0/0:17,0:16:41.87:0,42,643	0/0:16,0:16:39.10:0,39,752	0/0:14,0:14:32.95:0,33,529	0/0:16,0:16:28.69:0,29,571	0/0:13,0:13:18.52:0,19,334	0/0:19,0:19:40.88:0,41,335	0/0:22,0:22:50.40:0,50,527	0/0:26,0:25:53.60:0,54,667	0/0:17,0:17:17.99:0,18,278	0/1:11,0:9:17.08:174,0,17	1/1:4,0:32:0.14:343,0,0	1/1:8,0:9:8.22:166,8,0	0/0:9,0:9:21.04:0,21,340	0/0:12,0:12:30.40:0,30,586	0/0:11,0:11:24.03:0,24,454	0/0:15,0:15:29.60:0,30,723	0/0:21,0:21:38.24:0,38,614	0/1:12,0:23:42.38:131,0,42	0/0:6,0:5:12.01:0,12,147
chr10	52600816	.	AG	A	1040.94	PASS	AB=0.988;AC=14;AF=0.250;AN=56;BaseQRankSum=3.653;DP=464;FS=4.781;HRun=1;HaplotypeScore=69.7261;InbreedingCoeff=0.7292;MQ=64.44;MQ0=6;MQRankSum=-7.485;QD=5.85;ReadPosRankSum=-3.179;VQSLOD=-0.6707;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:35,0:35:51.96:350,52,0	1/1:4,0:4:10.35:54,10,0	0/0:32,1:13:14.65:0,15,240	0/1:21,0:14:5.13:5,0,90	0/0:22,0:22:53:0,53,502	0/0:16,0:16:21.57:0,22,280	0/0:10,0:10:21.68:0,22,162	0/1:40,1:39:73.65:74,0,336	0/0:5,0:5:5.24:0,5,49	0/0:17,0:17:47.23:0,47,373	0/0:16,0:16:38.35:0,38,325	0/0:12,2:14:28.97:0,29,230	0/0:16,0:16:33.71:0,34,295	0/0:12,0:12:26.03:0,26,222	1/1:17,1:19:32.45:174,32,0	1/1:20,0:20:31.72:185,32,0	1/1:20,2:21:48.11:317,48,0	1/1:16,0:16:11.36:67,11,0	0/0:10,0:7:5.62:0,6,65	0/0:23,1:24:12.07:0,12,76	0/0:9,0:9:5.21:0,5,35	0/0:8,0:8:20.98:0,21,192	0/0:12,0:12:29.60:0,30,274	0/0:10,0:10:23.57:0,24,199	0/0:15,0:15:36.66:0,37,304	0/0:16,2:18:26.85:0,27,214	0/0:13,0:12:7.96:0,8,50	0/0:6,0:5:11.52:0,12,81
chr10	52600951	.	TACAC	T	417.87	PASS	AB=1.000;AC=11;AF=0.220;AN=50;BaseQRankSum=2.628;DP=499;FS=1.116;HRun=0;HaplotypeScore=98.1297;InbreedingCoeff=0.6763;MQ=59.04;MQ0=14;MQRankSum=-1.846;QD=4.10;ReadPosRankSum=-2.024;VQSLOD=1.9134;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:20,18:39:16.40:225,16,0	1/1:3,2:5:3.01:46,3,0	./.	./.	0/0:11,0:12:14.77:0,15,225	0/0:13,0:15:18.05:0,18,340	0/0:33,0:35:39.30:0,39,644	0/1:28,0:27:0:0,0,0	0/0:12,0:13:30.08:0,30,546	0/0:8,0:8:11.98:0,12,184	0/0:9,0:9:15.04:0,15,257	0/0:15,0:17:26.40:0,26,408	0/0:10,0:11:22.02:0,22,324	0/0:16,0:16:14.55:0,15,248	1/1:5,4:9:15.03:195,15,0	1/1:6,6:12:6.02:84,6,0	0/0:27,0:28:20.99:0,21,282	0/0:21,0:22:18.01:0,18,228	0/0:16,0:15:4.56:0,5,40	1/1:6,0:8:0.87:2,1,0	0/0:24,0:25:2.77:0,3,15	0/0:10,1:11:6.02:0,6,141	0/0:16,0:16:2.99:0,3,24	0/0:32,0:39:47.59:0,48,862	0/0:20,0:20:23.83:0,24,372	0/0:18,0:18:21.91:0,22,306	./.	0/0:5,0:5:5.75:0,6,83
chr10	52600996	.	A	ACG	204.48	PASS	AB=0.580;AC=2;AF=0.036;AN=56;BaseQRankSum=1.685;DP=573;FS=2.313;HRun=0;HaplotypeScore=93.4597;InbreedingCoeff=-0.0180;MQ=54.77;MQ0=12;MQRankSum=0.180;QD=4.35;ReadPosRankSum=-0.456;VQSLOD=2.1027;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:44:60.52:0,61,458	0/0:3,0:3:2.83:0,3,24	0/0:16,0:6:14.98:0,15,128	0/0:20,0:3:5.98:0,6,49	0/0:18,0:18:43.60:0,44,422	0/0:14,0:14:32.96:0,33,350	0/0:42,0:42:84.21:0,84,1012	0/0:22,0:22:62.79:0,63,526	0/0:19,0:19:48:0,48,516	0/0:12,0:12:22.99:0,23,267	0/0:14,0:13:29.99:0,30,289	0/0:17,0:17:35.79:0,36,364	0/0:20,0:19:44.80:0,45,389	0/0:20,0:20:13.80:0,14,350	0/0:22,0:22:29.98:0,30,238	0/0:17,0:17:32.90:0,33,267	0/1:8,17:25:39.08:90,0,39	0/1:5,17:22:12.74:203,0,13	0/0:16,0:14:36.62:0,37,300	0/0:17,0:17:32.89:0,33,264	0/0:38,0:37:83.14:0,83,659	0/0:8,0:8:11.64:0,12,141	0/0:10,0:10:17.97:0,18,166	0/0:41,0:41:78.73:0,79,862	0/0:25,0:25:47.91:0,48,460	0/0:26,0:25:61.51:0,62,529	0/0:18,0:16:23.25:0,23,150	0/0:5,0:4:5.99:0,6,68
chr10	52602735	.	CA	C	706.38	PASS	AB=0.857;AC=18;AF=0.321;AN=56;BaseQRankSum=1.753;DP=514;FS=1.610;HRun=14;HaplotypeScore=62.1833;InbreedingCoeff=0.1676;MQ=69.80;MQ0=9;MQRankSum=2.119;QD=2.91;ReadPosRankSum=-0.314;VQSLOD=-0.5869;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:44.14:0,44,197	0/0:4,0:3:9.01:0,9,81	0/0:48,0:15:7.99:0,8,52	0/1:32,0:16:5.23:5,0,18	0/1:27,4:31:10.53:11,0,456	0/0:17,1:17:6.66:0,7,240	0/1:11,2:13:22.31:22,0,183	1/1:12,8:20:29.56:186,30,0	0/0:20,1:21:33.24:0,33,417	0/1:19,4:23:13.68:14,0,298	0/0:23,2:26:0.87:0,1,390	0/0:17,0:17:35.61:0,36,352	0/0:11,0:13:17.65:0,18,181	0/1:12,2:14:9.38:9,0,166	0/0:19,0:20:53.82:0,54,466	0/1:11,1:12:8.28:8,0,204	0/1:5,1:16:0.39:0,0,74	0/0:6,0:7:15.84:0,16,97	1/1:5,6:12:19.79:129,20,0	1/1:8,19:28:5.06:305,5,0	1/1:3,1:4:5.92:40,6,0	0/1:6,2:8:5.30:5,0,97	0/0:18,0:19:25.68:0,26,358	0/0:14,0:14:9.49:0,9,226	0/0:15,0:18:41.38:0,41,357	0/0:17,1:25:41.54:0,42,431	0/1:10,12:22:11.30:128,0,11	0/1:5,2:7:6.20:6,0,75
chr10	52602738	.	A	AAAC	824.74	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=-1.293;DP=512;FS=16.169;HRun=0;HaplotypeScore=84.7283;InbreedingCoeff=0.5716;MQ=70.54;MQ0=9;MQRankSum=0.873;QD=15.27;ReadPosRankSum=-0.268;VQSLOD=1.5124;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,17:21:51.13:907,51,0	0/0:4,0:3:9.03:0,9,149	0/0:52,0:19:12.13:0,12,154	0/1:33,0:16:23.79:24,0,105	0/0:28,0:28:75.18:0,75,1115	0/0:16,0:15:45.07:0,45,586	0/0:13,0:13:36.09:0,36,488	0/0:21,0:21:43.67:0,44,360	0/0:19,0:19:52.42:0,52,768	0/0:24,0:23:62.92:0,63,800	0/0:24,0:24:71.22:0,71,943	0/0:18,0:18:51.05:0,51,692	0/0:11,0:11:27.06:0,27,336	0/0:13,0:13:35.91:0,36,452	0/0:20,0:20:57.11:0,57,836	0/0:13,0:13:36.06:0,36,518	0/0:16,0:16:26.76:0,27,207	0/0:8,0:7:14.84:0,15,102	0/0:14,0:14:34.19:0,34,301	0/0:26,0:26:71.97:0,72,783	0/0:4,0:4:9:0,9,85	0/0:8,0:8:23.94:0,24,290	0/0:21,0:21:57.08:0,57,796	0/0:14,0:14:33.07:0,33,465	0/0:21,0:21:44.94:0,45,639	0/0:25,0:25:67.96:0,68,854	0/0:19,0:19:38.20:0,38,403	0/0:6,0:6:15.02:0,15,188
chr10	52604542	.	A	ATATCTGTC	22882.13	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-10.442;DP=702;FS=35.353;HRun=0;HaplotypeScore=161.1570;InbreedingCoeff=0.9978;MQ=78.62;MQ0=1;MQRankSum=-17.522;QD=91.16;ReadPosRankSum=-0.885;VQSLOD=2.9188;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,19:30:60.68:2678,61,0	1/1:0,10:12:27.56:1219,28,0	0/0:22,0:22:63.17:0,63,1638	0/0:29,0:28:70.79:0,71,1510	0/0:34,0:34:99:0,99,2735	0/0:31,0:31:87.27:0,87,2384	0/0:17,0:17:51.18:0,51,1470	1/1:9,8:33:99:3622,99,0	0/0:33,0:33:96.32:0,96,2715	0/0:36,0:36:99:0,102,2919	0/0:30,0:30:90.29:0,90,2502	0/0:33,0:33:96.30:0,96,2646	0/0:32,0:32:93.30:0,93,2629	0/0:34,0:34:99:0,99,2631	1/1:2,26:36:75.26:3374,75,0	1/1:1,13:21:38.71:1759,39,0	1/1:3,7:11:24.08:978,24,0	1/1:4,3:7:18.06:752,18,0	1/1:5,8:16:45.13:1536,45,0	1/1:3,24:31:75.26:3279,75,0	1/1:0,8:19:21.07:924,21,0	0/0:23,0:23:69.20:0,69,1831	0/0:20,0:20:60.19:0,60,1680	0/0:19,0:19:54.12:0,54,1431	0/0:24,0:24:69.24:0,69,2009	0/0:21,0:21:60.21:0,60,1697	1/1:3,21:28:63.22:2762,63,0	0/0:12,0:12:36.12:0,36,997
chr10	52605818	.	GAGAGAGAC	G	919.27	PASS	AB=1.000;AC=16;AF=0.296;AN=54;BaseQRankSum=1.245;DP=344;FS=14.189;HRun=0;HaplotypeScore=112.2958;InbreedingCoeff=0.6844;MQ=119.86;MQ0=8;MQRankSum=-1.632;QD=18.39;ReadPosRankSum=-3.013;VQSLOD=1.1239;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:10:2.74:0,3,12	1/1:1,0:1:2.96:19,3,0	0/0:62,0:39:42.35:0,42,884	0/0:101,0:50:99:0,107,1300	0/0:11,0:11:30.05:0,30,710	0/0:6,0:6:12.02:0,12,312	0/0:10,0:10:30.07:0,30,906	1/1:3,9:11:24.03:459,24,0	0/0:8,0:8:18.01:0,18,458	0/0:7,0:7:21.05:0,21,537	0/0:4,0:4:12.04:0,12,323	0/0:6,0:6:15.05:0,15,544	0/0:7,0:7:21.05:0,21,600	0/0:5,0:5:15.03:0,15,513	0/1:11,0:10:0:0,0,0	0/0:5,0:4:9.03:0,9,170	1/1:3,0:3:5.99:48,6,0	0/1:3,0:2:14.97:15,0,94	1/1:2,6:7:15.04:290,15,0	1/1:1,2:3:3.01:56,3,0	1/1:1,6:7:2.32:83,2,0	0/0:8,0:8:24.04:0,24,753	0/0:6,0:6:18.06:0,18,607	0/0:9,0:9:27.08:0,27,934	0/0:12,0:12:33.10:0,33,970	0/0:15,0:15:36.08:0,36,1042	1/1:2,0:2:6.02:115,6,0	./.
chr10	52607294	.	CT	C	2908.29	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=10.196;DP=486;FS=2.678;HRun=3;HaplotypeScore=77.0862;InbreedingCoeff=0.9948;MQ=84.18;MQ0=1;MQRankSum=-4.486;QD=27.70;ReadPosRankSum=-0.363;VQSLOD=2.6842;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,24:24:65.63:704,66,0	0/0:8,0:8:24.04:0,24,322	0/0:34,1:32:89.58:0,90,1156	0/0:25,0:22:57.14:0,57,781	0/0:12,0:12:36.12:0,36,514	0/0:23,0:23:66.20:0,66,914	0/0:17,0:17:51.17:0,51,734	1/1:0,13:13:39.11:472,39,0	0/0:17,0:17:51.16:0,51,719	0/0:18,0:18:54.18:0,54,777	0/0:18,0:18:48.10:0,48,633	0/0:14,0:14:33.11:0,33,475	0/0:17,0:17:48.14:0,48,671	0/0:14,0:14:35.97:0,36,492	0/0:15,0:15:39.12:0,39,545	0/0:16,0:16:36.05:0,36,493	0/0:21,0:21:63.14:0,63,838	0/0:12,0:12:30.10:0,30,426	1/1:2,8:10:24.07:297,24,0	1/1:0,19:19:57.04:666,57,0	1/1:1,23:23:56.70:587,57,0	0/0:27,0:27:78.22:0,78,1072	0/0:7,0:7:21.07:0,21,302	0/0:27,0:27:63.21:0,63,899	0/0:15,0:15:45.13:0,45,628	0/0:15,0:15:42.14:0,42,605	1/1:3,12:15:35.86:371,36,0	0/0:6,0:6:15.05:0,15,216
chr10	52607309	.	T	TACAC	1754.83	PASS	AB=0.803;AC=25;AF=0.481;AN=52;BaseQRankSum=3.122;DP=570;FS=16.459;HRun=0;HaplotypeScore=141.9208;InbreedingCoeff=0.3848;MQ=64.73;MQ0=5;MQRankSum=-0.853;QD=4.97;ReadPosRankSum=-2.738;VQSLOD=1.2850;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:25:0.89:2,1,0	0/1:11,4:17:29.41:162,0,29	./.	./.	0/0:11,0:17:21.03:0,21,264	0/0:27,0:28:45.14:0,45,644	0/1:21,0:21:5.35:5,0,176	1/1:12,0:11:7.84:76,8,0	0/0:17,0:18:11.90:0,12,167	0/0:17,0:21:21.04:0,21,232	0/0:16,0:18:21.06:0,21,305	0/1:18,0:23:69.32:69,0,185	0/1:18,0:20:2.31:2,0,74	0/0:13,0:15:17.97:0,18,259	1/1:12,8:23:14.66:293,15,0	0/1:9,6:18:34.85:141,0,35	1/1:20,0:19:12.69:76,13,0	1/1:11,0:17:3.01:52,3,0	1/1:12,2:13:21.07:441,21,0	1/1:23,0:24:9.95:190,10,0	1/1:27,0:25:9.02:100,9,0	0/1:23,0:28:29.76:30,0,102	0/0:13,0:16:9.02:0,9,139	0/1:19,0:39:65.95:66,0,90	0/0:11,0:11:15.05:0,15,231	0/0:13,0:14:12.03:0,12,166	1/1:18,1:20:11.95:230,12,0	0/0:8,0:9:15.04:0,15,213
chr10	52607553	.	TC	T	586.71	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.632;DP=675;FS=0.000;HRun=2;HaplotypeScore=60.9611;InbreedingCoeff=0.9689;MQ=91.70;MQ0=0;MQRankSum=-1.876;QD=29.34;ReadPosRankSum=1.084;VQSLOD=3.1592;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:57.19:0,57,854	0/0:10,0:10:30.10:0,30,450	0/0:24,0:24:62.37:0,62,897	0/0:31,0:31:90.18:0,90,1191	0/0:32,0:32:93.29:0,93,1354	0/0:32,0:32:87.27:0,87,1266	0/0:17,0:17:48.16:0,48,716	0/0:41,0:41:99:0,123,1808	0/0:31,0:31:93.29:0,93,1354	0/0:36,0:36:99:0,108,1575	0/0:21,0:21:60.20:0,60,899	0/0:27,0:27:81.25:0,81,1191	0/0:30,0:30:87.29:0,87,1304	0/0:29,0:29:84.28:0,84,1240	0/0:24,0:24:66.21:0,66,969	0/0:24,0:24:72.20:0,72,1054	1/1:0,17:17:45.15:584,45,0	1/1:0,3:3:9.03:117,9,0	0/0:25,0:25:75.25:0,75,1106	0/0:27,0:27:81.25:0,81,1175	0/0:25,0:25:75.25:0,75,1123	0/0:19,0:19:57.19:0,57,854	0/0:19,0:19:57.19:0,57,854	0/0:24,0:23:66.22:0,66,988	0/0:25,0:25:75.25:0,75,1124	0/0:23,0:23:69.23:0,69,1016	0/0:28,0:28:78.23:0,78,1131	0/0:11,0:11:33.11:0,33,494
chr10	52608191	.	CT	C	1055.83	PASS	AB=0.875;AC=11;AF=0.196;AN=56;BaseQRankSum=4.613;DP=454;FS=9.210;HRun=12;HaplotypeScore=51.5553;InbreedingCoeff=0.7911;MQ=61.18;MQ0=8;MQRankSum=2.457;QD=9.78;ReadPosRankSum=0.162;VQSLOD=1.7848;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,1:24:27.71:0,28,429	0/0:6,0:7:14.80:0,15,115	0/0:17,1:7:3:0,3,26	0/0:20,0:14:2.07:0,2,50	0/0:16,0:16:42.04:0,42,409	0/0:14,2:14:15.86:0,16,337	0/0:10,0:10:24.04:0,24,238	1/1:11,10:20:18.29:218,18,0	0/0:7,0:7:21.04:0,21,213	0/0:24,1:25:36.87:0,37,546	0/0:12,0:12:11.98:0,12,284	0/0:14,0:14:38.55:0,39,395	0/0:13,0:13:30.06:0,30,301	0/0:13,2:15:9.87:0,10,281	0/0:12,0:12:32.82:0,33,307	0/0:13,0:12:36.07:0,36,363	0/0:21,0:21:54.07:0,54,536	0/0:7,0:10:16.20:0,16,216	1/1:2,10:15:35.98:248,36,0	1/1:3,19:23:46.86:354,47,0	1/1:4,7:11:19.96:145,20,0	0/0:18,1:19:15.84:0,16,341	0/0:21,0:21:41.18:0,41,445	0/0:9,0:8:18.04:0,18,183	0/0:28,0:28:71.24:0,71,734	0/1:18,3:21:10.43:10,0,352	1/1:3,13:16:32.86:255,33,0	0/0:10,0:10:20.16:0,20,226
chr10	52610035	.	GCCTAGCA	G	3031.49	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=6.212;DP=206;FS=20.113;HRun=0;HaplotypeScore=49.3948;InbreedingCoeff=0.7800;MQ=49.00;MQ0=13;MQRankSum=-6.700;QD=65.90;ReadPosRankSum=0.705;VQSLOD=1.4314;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:4:12.04:0,12,503	0/0:5,0:5:15.05:0,15,598	0/0:7,0:2:3.01:0,3,72	0/0:10,0:2:6.02:0,6,208	0/0:7,0:7:18.06:0,18,696	0/0:12,0:12:30.10:0,30,1159	0/0:12,0:12:36.12:0,36,1287	1/1:0,14:10:30.10:770,30,0	0/0:2,0:2:6.02:0,6,210	0/0:3,0:3:9.03:0,9,349	0/0:4,0:4:9.03:0,9,374	0/0:9,0:9:24.08:0,24,1006	0/0:9,0:9:27.08:0,27,1007	0/0:10,0:10:27.09:0,27,1029	0/0:6,0:6:12.02:0,12,428	0/0:7,0:7:15.04:0,15,565	0/0:15,0:14:36.48:0,36,1393	0/0:6,0:6:15.05:0,15,629	1/1:0,6:5:15.05:417,15,0	1/1:0,12:13:39.13:1086,39,0	1/1:1,2:2:3.01:84,3,0	0/0:3,0:3:6.02:0,6,248	0/0:6,0:6:16.61:0,17,617	0/0:6,0:6:18.06:0,18,697	0/0:5,0:5:12.04:0,12,418	0/0:8,0:8:18.06:0,18,691	1/1:0,10:10:30.10:838,30,0	0/0:3,0:3:9.03:0,9,377
chr10	52611137	.	G	GT	4321.29	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-8.801;DP=652;FS=1.253;HRun=4;HaplotypeScore=68.2671;InbreedingCoeff=0.9756;MQ=82.34;MQ0=0;MQRankSum=-0.745;QD=34.57;ReadPosRankSum=-1.489;VQSLOD=4.8274;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:84.24:0,84,949	0/0:13,0:13:36.10:0,36,407	0/0:27,0:27:63.16:0,63,690	0/0:21,0:21:36.17:0,36,490	0/0:34,0:34:99:0,99,1122	0/0:26,0:26:75.21:0,75,848	0/0:19,0:19:48.07:0,48,528	1/1:7,19:26:57.18:761,57,0	0/0:26,0:26:72.20:0,72,815	0/0:27,0:27:78.22:0,78,877	0/0:20,0:20:54.15:0,54,611	0/0:14,0:14:33.09:0,33,370	0/0:31,0:31:84.22:0,84,941	0/0:24,0:24:66.18:0,66,743	0/0:34,0:34:90.25:0,90,1015	0/0:27,0:27:69.18:0,69,770	0/0:21,0:21:60.17:0,60,679	0/0:9,0:9:27.06:0,27,296	1/1:2,11:14:36.10:467,36,0	1/1:0,26:26:72.20:963,72,0	1/1:1,26:27:75.25:1025,75,0	0/0:26,0:26:69.14:0,69,741	0/0:21,0:21:60.12:0,60,664	0/0:28,0:28:81.23:0,81,917	0/0:22,0:22:63.18:0,63,709	0/0:25,0:25:72.20:0,72,816	1/1:0,32:32:81.27:1106,81,0	0/0:2,0:2:6.02:0,6,68
chr10	52611734	.	TG	T	2641.21	PASS	AB=0.961;AC=29;AF=0.518;AN=56;BaseQRankSum=0.294;DP=553;FS=11.224;HRun=11;HaplotypeScore=78.5541;InbreedingCoeff=0.6018;MQ=75.73;MQ0=0;MQRankSum=0.861;QD=7.75;ReadPosRankSum=4.046;VQSLOD=1.1923;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:6.03:0,6,165	0/0:8,0:8:11.89:0,12,82	0/1:24,0:24:4.87:5,0,260	0/1:23,0:22:40.05:40,0,191	0/1:13,1:14:4.38:4,0,132	0/0:20,0:20:16.98:0,17,140	0/0:17,1:18:5.44:0,5,263	1/1:8,8:16:17.56:133,18,0	0/0:21,0:21:20.97:0,21,192	0/0:15,0:16:9:0,9,86	0/0:16,0:16:9.02:0,9,95	1/1:10,13:23:45.99:354,46,0	1/1:8,4:12:17.93:143,18,0	0/1:24,2:26:19.32:19,0,182	0/0:29,1:31:30.80:0,31,418	0/0:27,0:27:30.07:0,30,317	1/1:10,16:27:48.43:434,48,0	1/1:6,7:14:22.96:171,23,0	1/1:17,2:19:10.08:115,10,0	1/1:12,5:17:26.87:209,27,0	1/1:9,12:21:32.93:266,33,0	1/1:13,5:19:22.91:170,23,0	1/1:19,4:24:27.80:207,28,0	1/1:10,14:24:41.94:345,42,0	0/0:19,0:19:20.99:0,21,200	0/1:16,1:17:12.61:13,0,83	1/1:15,4:21:5.08:219,5,0	0/0:9,0:9:15.04:0,15,160
chr10	52612886	.	A	AG	3700.84	PASS	AB=0.993;AC=27;AF=0.482;AN=56;BaseQRankSum=3.353;DP=435;FS=5.307;HRun=2;HaplotypeScore=79.1913;InbreedingCoeff=0.6140;MQ=68.80;MQ0=3;MQRankSum=-1.593;QD=15.36;ReadPosRankSum=-0.064;VQSLOD=3.2482;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:21,8:29:78.03:743,78,0	1/1:1,4:5:3.01:37,3,0	0/0:31,0:18:27.77:0,28,224	0/1:26,0:11:0.12:0,0,78	0/0:16,0:15:28.16:0,28,286	0/0:24,0:24:56.18:0,56,734	0/0:22,0:22:53.69:0,54,538	1/1:17,2:18:43.77:410,44,0	0/0:20,0:20:42.54:0,43,499	0/0:14,0:14:35.84:0,36,366	0/0:6,0:6:14.60:0,15,162	0/1:21,0:20:20.72:21,0,160	1/1:5,0:5:9.65:45,10,0	0/0:15,0:15:35.85:0,36,370	1/1:6,4:10:5.07:206,5,0	1/1:6,5:10:8.13:250,8,0	1/1:18,3:21:47.18:490,47,0	0/1:9,0:9:9.71:104,0,10	1/1:10,10:20:46.66:557,47,0	1/1:10,2:12:11.93:117,12,0	1/1:3,7:10:9.03:127,9,0	0/0:8,0:7:11.42:0,11,73	0/1:8,0:8:6.47:6,0,57	0/1:12,0:12:28.29:42,0,28	0/0:16,0:15:26.66:0,27,287	0/0:16,0:16:36.03:0,36,393	1/1:14,8:22:38.08:545,38,0	0/0:5,0:5:11.35:0,11,81
chr10	52612888	.	G	GGC	5057.52	PASS	AB=0.618;AC=23;AF=0.411;AN=56;BaseQRankSum=-0.868;DP=444;FS=6.796;HRun=0;HaplotypeScore=87.4898;InbreedingCoeff=0.6915;MQ=71.82;MQ0=3;MQRankSum=-0.776;QD=28.10;ReadPosRankSum=-1.139;VQSLOD=5.9262;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:27,2:29:80.71:1018,81,0	1/1:4,0:4:3.01:57,3,0	0/0:41,0:22:27.52:0,28,299	0/0:28,0:11:14.04:0,14,150	0/0:15,0:14:28.55:0,29,377	0/0:24,0:26:68.77:0,69,989	0/0:20,0:20:53.72:0,54,656	1/1:16,2:17:47.55:478,48,0	0/0:21,0:21:49.89:0,50,647	0/0:15,0:15:36.04:0,36,470	0/0:6,0:6:14.59:0,15,208	0/0:15,0:20:22.08:0,22,259	0/0:1,0:5:1.05:0,1,8	0/0:15,0:15:35.87:0,36,458	1/1:7,3:10:5.12:292,5,0	1/1:12,0:11:10.41:391,10,0	1/1:10,11:21:53.53:807,54,0	0/1:1,7:8:9.67:218,0,10	1/1:19,1:20:46.09:704,46,0	1/1:2,10:12:11.97:159,12,0	1/1:8,1:9:11.95:136,12,0	0/1:2,0:7:13.13:13,0,40	0/1:4,0:6:19.92:20,0,60	0/0:4,0:11:13.11:0,13,81	0/0:17,0:16:29.12:0,29,404	0/0:16,0:16:42.01:0,42,537	1/1:21,0:23:38.09:764,38,0	0/0:4,0:5:14.95:0,15,124
chr10	52612909	.	A	AT	7619.95	PASS	AB=0.963;AC=54;AF=0.964;AN=56;BaseQRankSum=-6.414;DP=398;FS=16.033;HRun=3;HaplotypeScore=56.2538;InbreedingCoeff=-0.0509;MQ=79.53;MQ0=3;MQRankSum=-4.565;QD=19.15;ReadPosRankSum=3.015;VQSLOD=3.4249;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,19:22:33.05:412,33,0	1/1:3,1:4:11.92:109,12,0	0/1:49,2:27:99:119,0,241	0/1:26,1:14:19.97:20,0,47	1/1:2,7:9:15.05:206,15,0	1/1:2,15:17:39.09:516,39,0	1/1:2,18:20:18.06:252,18,0	1/1:1,8:9:24.07:318,24,0	1/1:1,16:17:30.10:414,30,0	1/1:0,14:14:42.11:552,42,0	1/1:1,7:8:18.02:224,18,0	1/1:7,12:18:18.04:219,18,0	1/1:3,10:13:15.02:189,15,0	1/1:0,12:12:24.08:335,24,0	1/1:5,2:7:11.07:116,11,0	1/1:1,8:9:17.99:216,18,0	1/1:3,15:18:27.06:356,27,0	1/1:4,1:5:6.02:83,6,0	1/1:6,14:20:51.06:561,51,0	1/1:2,2:4:12.04:157,12,0	1/1:6,0:6:11.98:110,12,0	1/1:3,0:3:5.95:60,6,0	1/1:1,6:7:12.04:168,12,0	1/1:0,15:15:29.96:417,30,0	1/1:0,20:20:39.12:515,39,0	1/1:2,13:15:33.08:441,33,0	1/1:3,21:24:39.32:458,39,0	1/1:0,3:3:6.02:77,6,0
chr10	52703225	.	C	CT	603.03	PASS	AB=0.911;AC=15;AF=0.268;AN=56;BaseQRankSum=5.617;DP=318;FS=24.945;HRun=0;HaplotypeScore=136.7715;InbreedingCoeff=-0.1258;MQ=40.83;MQ0=2;MQRankSum=-5.620;QD=4.02;ReadPosRankSum=-1.520;VQSLOD=1.6350;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:12,1:13:54.43:54,0,105	0/1:4,2:6:29.72:109,0,30	0/0:10,0:4:12.02:0,12,132	0/0:9,0:6:15:0,15,155	0/0:10,2:12:1.38:0,1,203	0/1:15,2:18:46.21:46,0,180	0/1:12,0:13:28.67:29,0,73	0/1:12,0:9:15.52:16,0,203	0/1:14,1:15:16.36:16,0,447	0/1:14,2:16:88.33:88,0,315	0/0:7,4:11:22.20:0,22,207	0/0:14,0:15:15.86:0,16,153	0/0:12,0:12:14.90:0,15,158	0/1:13,1:15:62.02:62,0,127	0/1:11,1:12:29.21:29,0,267	1/1:3,6:9:14.50:257,15,0	0/0:11,0:11:32.96:0,33,373	0/0:9,0:9:9.03:0,9,125	0/1:6,0:6:18.15:18,0,159	0/0:13,0:13:7.38:0,7,217	0/0:7,0:7:7.17:0,7,108	0/0:11,0:12:13.61:0,14,313	0/0:15,0:15:33.02:0,33,453	0/0:10,0:10:14.83:0,15,168	0/0:10,0:10:8.44:0,8,69	0/1:11,1:11:20.88:21,0,269	0/0:11,0:11:16.21:0,16,143	1/1:3,0:3:0.10:14,0,0
chr10	52709268	.	C	CTT	3581.08	PASS	AC=20;AF=0.385;AN=52;BaseQRankSum=-6.041;DP=430;FS=1.213;HRun=3;HaplotypeScore=36.8223;InbreedingCoeff=0.8855;MQ=30.41;MQ0=174;MQRankSum=1.528;QD=23.41;ReadPosRankSum=2.815;VQSLOD=1.8912;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:22:39.13:0,39,546	0/0:6,0:5:12.04:0,12,159	./.	./.	0/0:16,0:9:18.06:0,18,251	0/0:15,0:10:18.04:0,18,234	0/0:14,0:10:21.07:0,21,293	1/1:4,12:2:6.02:110,6,0	0/0:18,0:11:21.07:0,21,294	0/0:17,0:13:33.03:0,33,404	0/0:5,0:2:2.94:0,3,18	1/1:0,20:11:30.06:514,30,0	1/1:1,11:8:12.04:220,12,0	0/0:21,0:11:17.83:0,18,244	0/0:26,0:16:33.11:0,33,461	0/0:15,0:12:18.06:0,18,252	0/0:19,0:11:24.05:0,24,315	0/0:11,0:9:18.06:0,18,252	1/1:1,8:4:12.03:190,12,0	1/1:1,9:10:21.07:385,21,0	1/1:1,16:10:18.06:330,18,0	1/1:0,7:5:15.05:274,15,0	1/1:1,11:7:8.99:129,9,0	1/1:1,25:23:42.14:769,42,0	0/0:21,0:12:29.95:0,30,396	0/0:9,0:4:9.03:0,9,126	1/1:1,23:15:36.12:660,36,0	0/0:1,0:1:3.01:0,3,42
chr10	52730697	.	G	GA	1818.48	PASS	AC=18;AF=0.346;AN=52;BaseQRankSum=-0.667;DP=511;FS=9.910;HRun=8;HaplotypeScore=33.4606;InbreedingCoeff=0.9423;MQ=28.98;MQ0=223;MQRankSum=0.279;QD=11.02;ReadPosRankSum=0.560;VQSLOD=0.7347;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:20:44.98:0,45,403	0/0:7,0:4:6:0,6,55	./.	./.	0/0:14,0:10:17.96:0,18,156	0/0:23,0:14:32.93:0,33,285	0/0:20,0:12:17.91:0,18,148	0/0:19,0:4:12.01:0,12,110	0/0:30,0:15:30.02:0,30,274	0/0:23,0:9:18.01:0,18,165	0/0:17,0:10:20.96:0,21,184	1/1:4,25:14:24.07:277,24,0	1/1:1,14:8:21.02:227,21,0	0/0:14,0:13:17.96:0,18,156	0/0:18,0:14:32.97:0,33,294	0/0:14,0:6:9:0,9,82	0/0:26,0:21:39.02:0,39,356	0/0:10,0:8:15.01:0,15,137	1/1:4,12:8:18.04:199,18,0	1/1:4,15:8:15.04:173,15,0	1/1:3,14:12:18.48:193,18,0	1/1:1,11:7:18.02:194,18,0	1/1:2,10:5:11.99:124,12,0	1/1:5,17:20:30.09:346,30,0	0/0:20,0:13:32.96:0,33,293	0/0:24,0:12:30.01:0,30,275	1/1:7,16:17:27.02:289,27,0	0/0:9,0:4:12.01:0,12,110
chr10	52731913	.	GGT	G	645.84	PASS	AB=0.807;AC=24;AF=0.500;AN=48;BaseQRankSum=6.096;DP=462;FS=2.820;HRun=0;HaplotypeScore=57.2946;InbreedingCoeff=0.3510;MQ=37.82;MQ0=99;MQRankSum=-0.654;QD=2.63;ReadPosRankSum=-0.232;VQSLOD=1.3786;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:18,11:26:52.09:101,0,52	0/1:7,2:6:35.82:38,0,36	0/0:17,0:4:0:0,0,0	./.	0/0:17,0:11:5.95:0,6,62	0/0:14,0:10:8.92:0,9,109	0/0:22,0:22:4.33:0,4,266	./.	0/0:16,0:15:12.04:0,12,179	0/1:13,4:10:55.63:56,0,157	1/1:3,0:4:2.84:14,3,0	1/1:19,0:18:11.12:53,11,0	1/1:8,0:7:2.96:19,3,0	0/0:17,0:17:7.36:0,7,324	1/1:15,9:18:14.87:145,15,0	1/1:9,7:11:12.03:131,12,0	0/1:27,2:27:31.97:32,0,559	0/0:16,0:15:27.09:0,27,396	./.	./.	0/0:19,0:22:0:0,0,0	1/1:12,0:10:5.68:28,6,0	1/1:11,0:11:5.68:28,6,0	1/1:17,1:28:20.17:122,20,0	0/0:9,0:5:11.93:0,12,127	1/1:11,0:5:3.01:32,3,0	1/1:9,0:5:0.47:1,0,0	0/0:3,0:3:3.01:0,3,45
chr10	52753971	.	TA	T	98.90	PASS	AB=0.917;AC=3;AF=0.75;AN=4;BaseQRankSum=-0.633;DP=49;FS=0.000;HRun=4;HaplotypeScore=47.5745;MQ=109.24;MQ0=29;MQRankSum=-0.365;QD=3.80;ReadPosRankSum=0.633;VQSLOD=-0.5601;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	./.	1/1:11,4:7:5.27:146,5,0	0/1:9,1:3:18.29:18,0,22	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.
chr10	52820911	.	CAG	C	357.19	PASS	AC=18;AF=0.563;AN=32;BaseQRankSum=-2.152;DP=234;FS=7.732;HRun=0;HaplotypeScore=27.2283;InbreedingCoeff=0.5357;MQ=65.70;MQ0=161;MQRankSum=-2.001;QD=3.84;ReadPosRankSum=-0.944;VQSLOD=-0.0671;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:1:1.82:0,2,5	./.	0/0:14,0:6:8.50:0,9,48	0/0:26,0:12:7.55:0,8,30	1/1:4,2:1:3.01:37,3,0	1/1:10,4:2:6.02:71,6,0	1/1:7,2:4:6.02:75,6,0	./.	1/1:7,3:3:9.03:111,9,0	./.	1/1:8,0:1:0.89:2,1,0	./.	./.	1/1:11,2:2:6.02:75,6,0	0/0:11,0:2:5.78:0,6,32	0/0:9,0:1:2.22:0,2,7	0/0:7,0:2:6.02:0,6,87	0/0:10,0:5:12.04:0,12,192	./.	1/1:6,2:1:3.01:37,3,0	1/1:9,5:4:3.01:37,3,0	./.	./.	./.	./.	1/1:10,1:2:4.82:32,5,0	./.	./.
chr10	52837724	.	A	AAT	60.95	PASS	AC=4;AF=0.105;AN=38;BaseQRankSum=0.902;DP=304;FS=0.000;HRun=0;HaplotypeScore=16.4654;InbreedingCoeff=0.4184;MQ=26.24;MQ0=198;MQRankSum=0.113;QD=2.65;ReadPosRankSum=-0.169;VQSLOD=0.8584;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:8:15.05:0,15,195	./.	./.	0/0:10,0:2:3.35:0,3,16	./.	0/0:22,0:13:33.11:0,33,429	0/0:6,0:1:3.01:0,3,39	0/0:26,0:14:39.13:0,39,507	0/0:12,0:6:15.05:0,15,195	0/0:12,0:3:9.03:0,9,117	0/0:18,0:1:3.01:0,3,39	0/0:9,0:5:12.04:0,12,156	0/0:9,0:4:9.03:0,9,117	0/0:11,0:5:12.04:0,12,156	0/0:12,0:7:18.06:0,18,234	0/0:9,0:4:12.04:0,12,156	0/0:10,0:4:9.03:0,9,117	0/0:7,0:1:3.01:0,3,39	1/1:4,4:2:6.02:102,6,0	./.	./.	./.	./.	0/0:3,0:1:3.01:0,3,39	./.	0/0:21,0:5:9.03:0,9,117	1/1:4,11:5:3.01:51,3,0	./.
chr10	52837788	.	G	GTA	1252.62	PASS	AC=8;AF=0.154;AN=52;BaseQRankSum=-4.980;DP=391;FS=2.714;HRun=0;HaplotypeScore=38.0574;InbreedingCoeff=0.9006;MQ=34.69;MQ0=109;MQRankSum=1.851;QD=29.82;ReadPosRankSum=1.621;VQSLOD=4.2806;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:22:48.15:0,48,615	0/0:7,0:4:8.99:0,9,97	./.	./.	0/0:22,0:15:33.11:0,33,425	0/0:26,0:20:44.75:0,45,537	0/0:11,0:9:20.98:0,21,250	0/0:27,0:6:12.03:0,12,142	0/0:12,0:8:18.06:0,18,233	0/0:16,0:13:39.13:0,39,506	0/0:13,0:6:15.05:0,15,191	0/0:16,0:14:38.96:0,39,476	0/0:13,0:11:27.03:0,27,326	0/0:12,0:7:21:0,21,251	0/0:10,0:8:17.99:0,18,212	0/0:14,0:8:18.06:0,18,233	0/0:14,0:12:33.11:0,33,428	0/0:3,0:2:3.01:0,3,39	1/1:0,8:7:21.07:357,21,0	1/1:1,13:12:33.11:559,33,0	1/1:1,7:7:15.05:255,15,0	0/0:17,0:12:27.02:0,27,325	0/0:19,0:15:35.96:0,36,406	0/0:9,0:8:21.07:0,21,273	0/0:15,0:11:26.98:0,27,309	0/0:27,0:16:48.13:0,48,608	1/1:7,4:7:15.05:235,15,0	0/0:6,0:5:15.05:0,15,195
chr10	52838924	.	GGGGTGTGT	G	151.31	PASS	AB=0.944;AC=15;AF=0.625;AN=24;BaseQRankSum=-1.371;DP=346;FS=0.000;HRun=0;HaplotypeScore=36.1166;InbreedingCoeff=0.2517;MQ=22.23;MQ0=251;MQRankSum=-1.632;QD=1.25;ReadPosRankSum=1.371;VQSLOD=1.1594;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	0/0:6,0:1:3.01:0,3,36	1/1:21,0:1:2.04:6,2,0	./.	1/1:7,10:11:3.01:67,3,0	./.	1/1:7,0:1:2.94:18,3,0	./.	./.	0/1:8,0:2:13.07:22,0,13	./.	./.	0/0:9,0:3:2.97:0,3,20	./.	1/1:10,0:4:2.72:20,3,0	0/1:10,0:5:0:0,0,0	./.	./.	./.	./.	./.	0/1:20,0:11:0:0,0,0	0/0:13,0:4:2.74:0,3,19	./.	1/1:6,0:9:3:28,3,0	1/1:10,0:5:13.11:83,13,0	./.	./.
chr10	52840521	.	AT	A	7416.20	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=13.929;DP=686;FS=0.292;HRun=8;HaplotypeScore=67.0844;InbreedingCoeff=0.9460;MQ=76.40;MQ0=0;MQRankSum=-0.632;QD=24.56;ReadPosRankSum=-1.060;VQSLOD=5.1173;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:54.17:0,54,652	0/0:8,0:8:24.07:0,24,290	0/1:16,0:15:4.19:4,0,247	0/0:18,0:18:45.09:0,45,505	1/1:2,33:35:99:956,99,0	1/1:2,39:41:99:1072,111,0	1/1:1,17:18:48.08:464,48,0	1/1:4,28:32:84.12:808,84,0	1/1:2,26:28:75.12:724,75,0	1/1:4,22:26:66.10:637,66,0	1/1:1,19:20:57.09:550,57,0	0/0:19,0:19:54.17:0,54,652	0/0:37,0:37:99:0,108,1269	1/1:1,24:25:63.10:608,63,0	0/0:30,0:32:93.02:0,93,1080	0/0:35,0:35:99:0,99,1184	0/0:20,0:20:54.12:0,54,635	0/0:14,0:14:36.11:0,36,435	0/0:23,0:23:68.56:0,69,795	0/0:36,0:36:99:0,102,1222	0/0:29,0:29:78.23:0,78,932	0/0:24,0:24:66.20:0,66,788	0/0:17,0:17:42.12:0,42,495	0/0:16,0:17:41.99:0,42,486	1/1:2,17:19:45.07:435,45,0	1/1:2,29:31:87.14:840,87,0	0/0:36,0:35:99:0,102,1230	1/1:0,11:11:33.05:319,33,0
chr10	52841148	.	AGG	A	2477.40	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=5.989;DP=586;FS=2.120;HRun=8;HaplotypeScore=82.4898;InbreedingCoeff=0.9911;MQ=72.38;MQ0=0;MQRankSum=-0.804;QD=27.22;ReadPosRankSum=1.956;VQSLOD=3.6053;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:64.09:0,64,1027	0/0:11,0:11:29.31:0,29,445	0/0:20,0:20:51.10:0,51,757	0/0:20,0:20:36.89:0,37,634	0/0:17,0:17:39.13:0,39,641	0/0:17,0:17:48.12:0,48,734	0/0:25,0:25:69.22:0,69,1125	0/0:28,0:27:72.20:0,72,1125	0/0:27,0:27:81.28:0,81,1359	0/0:23,0:23:42.14:0,42,700	0/0:13,0:13:36.12:0,36,588	0/0:4,0:22:30.04:0,30,288	0/0:6,0:16:35.90:0,36,349	0/0:23,0:23:69.22:0,69,1141	0/0:25,0:25:72.18:0,72,1113	0/0:35,0:35:99:0,105,1750	0/0:30,0:30:84.27:0,84,1356	0/0:18,0:18:48.16:0,48,785	1/1:3,13:16:42.08:485,42,0	1/1:1,12:13:33.10:401,33,0	1/1:3,25:28:60.18:732,60,0	0/0:3,0:14:14.47:0,14,169	0/0:5,0:17:18.02:0,18,170	0/0:5,0:23:59.34:0,59,570	0/0:18,0:18:51.13:0,51,755	0/0:20,0:20:48.14:0,48,754	1/1:4,30:34:84.11:1020,84,0	0/0:8,0:8:21.07:0,21,326
chr10	52841168	.	TC	T	690.20	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.015;DP=663;FS=12.228;HRun=5;HaplotypeScore=87.7858;InbreedingCoeff=0.9981;MQ=82.17;MQ0=0;MQRankSum=-0.111;QD=21.57;ReadPosRankSum=-1.921;VQSLOD=1.8262;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:84.18:0,84,1062	0/0:14,0:14:36.12:0,36,492	0/0:28,0:28:72.19:0,72,948	0/0:21,0:21:53.39:0,53,702	0/0:25,0:25:66.14:0,66,807	0/0:27,0:27:72.20:0,72,938	0/0:29,0:29:81.26:0,81,1091	1/1:5,27:31:72.16:785,72,0	0/0:28,0:28:81.26:0,81,1093	0/0:24,0:24:69.12:0,69,787	0/0:14,0:14:39.08:0,39,472	0/0:18,0:18:33.11:0,33,451	0/0:17,0:17:45.07:0,45,548	0/0:24,0:24:72.23:0,72,961	0/0:31,0:31:90.28:0,90,1201	0/0:37,0:37:99:0,105,1419	0/0:29,0:29:84.26:0,84,1131	0/0:17,0:17:42.14:0,42,574	0/0:18,0:18:48.09:0,48,565	0/0:23,0:23:69.13:0,69,818	0/0:25,0:25:60.14:0,60,768	0/0:19,0:19:45.04:0,45,471	0/0:15,0:15:27:0,27,300	0/0:23,0:23:65.76:0,66,902	0/0:28,0:28:81.09:0,81,924	0/0:17,0:17:39.09:0,39,465	0/0:36,0:36:99:0,99,1336	0/0:11,0:11:33.11:0,33,451
chr10	52841835	.	AGGGCTTGTG	A	6930.96	PASS	AB=0.533;AC=7;AF=0.125;AN=56;BaseQRankSum=13.286;DP=753;FS=0.914;HRun=0;HaplotypeScore=208.9605;InbreedingCoeff=0.8356;MQ=90.82;MQ0=0;MQRankSum=-14.055;QD=66.64;ReadPosRankSum=3.589;VQSLOD=4.7094;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,24:27:42.10:1202,42,0	0/1:2,14:16:99:876,0,111	0/0:26,0:26:60.55:0,61,2248	0/0:36,0:36:81.73:0,82,3582	0/0:38,0:38:99:0,111,5161	0/0:30,0:30:84.29:0,84,4046	0/0:23,0:23:60.21:0,60,2800	0/0:35,0:35:99:0,99,4607	0/0:31,0:31:87.27:0,87,3774	0/0:37,0:37:99:0,105,4660	0/0:22,0:22:54.19:0,54,2392	0/0:37,0:37:99:0,102,4492	0/0:23,0:23:69.24:0,69,3251	0/0:19,0:19:54.19:0,54,2559	1/1:3,30:34:87.30:2581,87,0	1/1:1,26:27:75.26:2273,75,0	0/0:21,0:21:60.21:0,60,2795	0/0:15,0:15:42.14:0,42,1929	0/0:27,0:27:75.26:0,75,3398	0/0:37,0:37:99:0,99,4606	0/0:29,0:29:81.28:0,81,3735	0/0:22,0:22:60.21:0,60,2429	0/0:27,0:27:75.26:0,75,3280	0/0:24,0:24:69.24:0,69,3333	0/0:26,0:26:60.21:0,60,2795	0/0:18,0:18:54.17:0,54,2244	0/0:39,0:39:99:0,108,5087	0/0:7,0:7:21.07:0,21,1015
chr10	52843648	.	C	CAGGAGCAAT	10070.56	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-3.881;DP=665;FS=1.446;HRun=0;HaplotypeScore=172.0403;InbreedingCoeff=0.9878;MQ=91.08;MQ0=0;MQRankSum=-13.339;QD=111.90;ReadPosRankSum=-1.949;VQSLOD=5.0891;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,129,3775	0/0:7,0:7:21.07:0,21,593	0/0:23,0:23:57.20:0,57,1632	0/0:36,0:36:99:0,99,2648	0/0:26,0:26:75.24:0,75,2220	0/0:21,0:21:60.21:0,60,1751	0/0:26,0:26:78.25:0,78,2286	0/0:38,0:38:99:0,99,2932	0/0:27,0:27:75.26:0,75,2242	0/0:27,0:27:78.22:0,78,2238	0/0:26,0:26:78.24:0,78,2191	0/0:20,0:20:60.21:0,60,1807	0/0:31,0:31:90.30:0,90,2694	0/0:27,0:27:78.27:0,78,2336	0/0:33,0:33:93.29:0,93,2722	0/0:33,0:33:96.32:0,96,2818	0/0:20,0:20:54.11:0,54,1642	0/0:22,0:22:57.20:0,57,1662	1/1:11,5:18:51.16:2003,51,0	1/1:5,11:16:48.16:2019,48,0	1/1:10,3:13:18.02:712,18,0	0/0:9,0:9:27.09:0,27,805	0/0:14,0:14:42.14:0,42,1303	0/0:23,0:23:43.24:0,43,1814	0/0:16,0:15:48.16:0,48,1444	0/0:22,0:22:66.23:0,66,2048	1/1:13,25:43:99:5337,114,0	0/0:4,0:4:12.04:0,12,372
chr10	52845951	.	T	TATAC	3137.99	PASS	AB=0.938;AC=8;AF=0.143;AN=56;BaseQRankSum=8.931;DP=850;FS=0.000;HRun=0;HaplotypeScore=199.0678;InbreedingCoeff=0.7472;MQ=56.14;MQ0=5;MQRankSum=-3.454;QD=24.71;ReadPosRankSum=-1.086;VQSLOD=3.0917;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:25.83:0,26,815	0/0:14,0:14:27.06:0,27,414	0/0:35,0:21:14.67:0,15,190	0/0:28,0:16:6.02:0,6,98	0/0:33,0:33:40.61:0,41,811	0/0:28,0:27:59.51:0,60,882	0/0:24,0:24:50.61:0,51,757	0/0:51,0:51:69.18:0,69,1005	0/0:21,0:21:48.10:0,48,717	0/0:37,0:37:67.28:0,67,1325	0/0:31,0:33:84.23:0,84,1277	0/0:29,0:29:2.60:0,3,134	0/0:25,0:25:23.97:0,24,201	0/0:35,0:36:78.24:0,78,1210	0/0:44,0:44:93.26:0,93,1435	0/0:28,0:28:63.12:0,63,931	0/0:25,0:25:11.93:0,12,594	0/0:26,0:25:28.38:0,28,609	0/1:12,2:12:6.70:528,0,7	1/1:20,13:33:54.25:1057,54,0	1/1:16,4:20:15.05:358,15,0	0/0:21,0:21:14.96:0,15,120	0/0:42,0:42:53.20:0,53,391	0/1:25,0:25:0:0,0,0	0/0:36,0:36:87.19:0,87,1304	0/0:42,0:43:93.25:0,93,1416	1/1:22,13:34:54.86:1340,55,0	0/0:21,0:21:24.08:0,24,392
chr10	52845962	.	ACATACATACATACGTACATAC	A	6591.57	PASS	AB=0.846;AC=11;AF=0.196;AN=56;BaseQRankSum=7.615;DP=832;FS=10.189;HRun=0;HaplotypeScore=418.7582;InbreedingCoeff=0.7449;MQ=53.65;MQ0=7;MQRankSum=-8.335;QD=32.15;ReadPosRankSum=1.083;VQSLOD=1.6127;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:60.75:0,61,4016	0/0:11,0:11:33.09:0,33,2548	0/0:28,0:13:26.82:0,27,809	0/1:33,0:13:7.40:7,0,457	0/0:29,0:29:46.64:0,47,3657	0/0:26,0:25:62.20:0,62,4756	0/0:22,0:22:56.98:0,57,3488	0/0:53,0:53:99:0,108,5089	0/0:22,0:22:63.11:0,63,3905	0/0:41,0:41:85.36:0,85,7173	0/0:35,0:35:99:0,102,7077	1/1:7,17:24:21.07:1163,21,0	1/1:2,24:26:24.08:1362,24,0	0/0:34,0:34:78.25:0,78,5110	0/0:39,0:39:99:0,99,7776	0/0:28,0:28:75.18:0,75,4860	0/0:27,0:27:56.82:0,57,3226	0/0:31,0:30:49.39:0,49,4003	0/0:14,0:12:26.82:0,27,929	0/1:35,0:35:8.21:8,0,1940	0/0:17,0:17:8.62:0,9,341	1/1:4,17:21:15.05:851,15,0	1/1:5,33:38:57.20:3201,57,0	0/1:4,24:28:0.08:0,0,0	0/0:37,0:37:95.75:0,96,6022	0/0:38,0:38:93.32:0,93,7166	0/0:37,0:36:52.28:0,52,3198	0/0:18,0:18:30.10:0,30,2363
chr10	52845982	.	AC	A	820.75	PASS	AB=0.885;AC=13;AF=0.232;AN=56;BaseQRankSum=12.420;DP=816;FS=11.526;HRun=2;HaplotypeScore=158.6031;InbreedingCoeff=0.5896;MQ=54.92;MQ0=5;MQRankSum=-6.858;QD=3.68;ReadPosRankSum=1.790;VQSLOD=-0.6182;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,2:44:70.30:0,70,1280	0/0:15,0:15:45.15:0,45,673	0/0:34,0:21:57.16:0,57,786	0/0:32,3:16:35.65:0,36,480	0/0:26,0:26:75.24:0,75,1093	0/0:27,0:27:61.81:0,62,1056	0/0:27,0:27:78.26:0,78,1166	0/0:49,0:49:99:0,144,2149	0/0:22,0:22:66.21:0,66,968	0/0:38,0:38:99:0,111,1644	0/0:39,0:39:99:0,116,1690	1/1:17,0:17:18.25:74,18,0	1/1:24,0:24:21.21:91,21,0	0/0:31,0:31:87.28:0,87,1280	0/0:37,0:37:99:0,111,1661	0/0:24,0:24:69.23:0,69,1033	0/0:29,1:30:78.12:0,78,1071	0/0:28,0:28:75:0,75,1064	0/1:14,4:17:99:118,0,277	0/1:32,6:38:99:155,0,125	0/1:13,3:16:4.54:105,0,5	1/1:17,0:17:13.57:61,14,0	1/1:33,0:33:54.57:324,55,0	0/1:24,0:24:0:0,0,0	0/0:39,0:39:99:0,108,1502	0/0:36,0:36:99:0,105,1551	0/1:31,4:36:63.65:64,0,248	0/0:11,0:11:33.11:0,33,494
chr10	52845988	.	CATA	C	527.07	PASS	AB=0.956;AC=10;AF=0.179;AN=56;BaseQRankSum=11.225;DP=834;FS=12.130;HRun=0;HaplotypeScore=186.8339;InbreedingCoeff=0.1117;MQ=55.95;MQ0=3;MQRankSum=-7.741;QD=2.23;ReadPosRankSum=3.400;VQSLOD=1.9830;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:89.61:0,90,2033	0/0:16,0:16:48.16:0,48,1136	0/0:35,0:25:71.83:0,72,1543	0/0:37,0:19:47.19:0,47,991	0/0:26,0:26:78.27:0,78,1803	0/0:29,0:29:80.76:0,81,1860	0/0:28,0:28:81.22:0,81,1708	0/0:49,0:49:99:0,144,3099	0/0:22,0:22:66.22:0,66,1486	0/0:36,0:36:99:0,108,2400	0/0:37,0:37:99:0,111,2503	1/1:18,0:18:19.36:109,19,0	0/1:27,0:27:99:106,0,152	0/0:28,0:28:84.28:0,84,1813	0/0:41,0:41:99:0,120,2828	0/0:23,0:23:69.24:0,69,1589	0/0:30,0:30:78.27:0,78,1813	0/0:28,0:28:74.42:0,74,1694	0/1:15,2:17:26.24:26,0,861	0/1:38,2:40:7.39:7,0,896	0/1:14,3:17:78.69:79,0,113	0/1:18,0:18:54.88:69,0,55	0/1:34,0:34:28.66:252,0,29	0/1:26,0:26:0.07:0,0,0	0/0:39,0:39:99:0,111,2399	0/0:38,0:38:99:0,114,2556	0/1:37,2:38:21.54:22,0,1272	0/0:9,0:9:27.09:0,27,666
chr10	52845998	.	T	TACAC	2633.16	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=8.590;DP=814;FS=0.522;HRun=0;HaplotypeScore=188.8954;InbreedingCoeff=0.9011;MQ=60.24;MQ0=2;MQRankSum=-6.902;QD=18.29;ReadPosRankSum=-1.709;VQSLOD=2.7350;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:17.83:0,18,1050	0/0:15,0:15:42.13:0,42,700	0/0:34,0:27:55:0,55,753	0/0:34,0:23:47.62:0,48,691	0/0:28,0:28:69.06:0,69,974	0/0:28,0:28:56.57:0,57,972	0/0:26,0:26:66.14:0,66,997	0/0:48,0:48:99:0,108,1494	0/0:22,0:22:66.16:0,66,1027	0/0:32,0:32:87.23:0,87,1398	0/0:34,0:34:90.24:0,90,1499	0/0:19,0:20:15.15:0,15,266	0/0:28,0:28:36.04:0,36,381	0/0:24,0:24:60.16:0,60,994	0/0:45,0:45:99:0,111,1649	0/0:26,0:26:66.14:0,66,995	0/0:27,0:27:72.13:0,72,1137	0/0:26,0:26:54.08:0,54,886	1/1:6,11:17:36.08:702,36,0	1/1:10,33:43:39.22:767,39,0	1/1:7,8:16:3.01:74,3,0	0/0:19,0:19:20.76:0,21,178	0/0:35,0:35:60.53:0,61,509	0/1:27,0:27:0.08:0,0,0	0/0:33,0:33:83.82:0,84,1367	0/0:34,0:34:87.11:0,87,1336	1/1:12,27:40:35.94:1241,36,0	0/0:11,0:11:33.06:0,33,521
chr10	52847335	.	T	TA	2653.44	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-10.737;DP=780;FS=1.913;HRun=9;HaplotypeScore=73.2051;InbreedingCoeff=0.9711;MQ=82.69;MQ0=0;MQRankSum=-0.843;QD=24.34;ReadPosRankSum=-0.567;VQSLOD=4.1810;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:58:99:0,155,1334	0/0:11,0:11:29.96:0,30,253	0/0:24,0:24:43.62:0,44,333	0/0:24,1:24:31.56:0,32,384	0/0:21,0:21:56.98:0,57,494	0/0:22,0:22:59.73:0,60,517	0/0:21,0:21:59.95:0,60,514	0/0:42,0:42:99:0,111,955	0/0:29,0:29:83.98:0,84,729	0/0:34,0:34:92.91:0,93,793	0/0:22,0:23:62.02:0,62,527	0/0:22,0:22:53.97:0,54,469	0/0:27,0:27:65.96:0,66,573	0/0:25,0:25:56.97:0,57,495	0/0:43,0:43:99:0,105,911	0/0:45,0:45:99:0,120,1038	0/0:31,0:31:86.95:0,87,751	0/0:26,0:26:71.96:0,72,620	1/1:6,18:24:54.15:597,54,0	1/1:2,25:27:69.13:748,69,0	1/1:4,17:22:50.97:540,51,0	0/0:23,0:24:71.02:0,71,605	0/0:26,0:26:71.93:0,72,614	0/0:36,0:36:80.93:0,81,697	0/0:26,0:26:68.95:0,69,595	0/0:27,0:27:71.97:0,72,625	1/1:5,31:36:84.23:929,84,0	0/0:2,0:2:6:0,6,52
chr10	52849091	.	T	TAC	215.48	PASS	AB=1.000;AC=11;AF=0.229;AN=48;BaseQRankSum=-3.847;DP=657;FS=2.924;HRun=0;HaplotypeScore=129.4795;InbreedingCoeff=0.4804;MQ=66.68;MQ0=10;MQRankSum=3.956;QD=1.20;ReadPosRankSum=0.136;VQSLOD=1.8157;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:33:5.68:0,6,28	0/0:7,0:8:5.68:0,6,28	./.	./.	0/0:18,0:18:8.48:0,8,41	0/0:20,0:20:2.84:0,3,14	0/1:26,0:26:0:0,0,0	./.	0/0:26,0:26:11.36:0,11,56	0/0:32,0:32:8.28:0,8,38	0/0:15,0:15:8.43:0,8,40	0/0:18,0:18:5.85:0,6,46	1/1:11,6:19:3.24:18,3,0	0/0:17,0:16:2.84:0,3,14	0/0:24,0:32:18.56:0,19,89	0/0:15,0:22:12.92:0,13,60	0/0:14,0:19:11.61:0,12,77	0/0:18,0:20:2.84:0,3,14	./.	0/0:18,0:23:11.10:0,11,51	0/1:46,0:42:0:0,0,0	1/1:21,0:21:15.03:193,15,0	1/1:21,0:21:5.81:55,6,0	1/1:16,15:33:6.01:70,6,0	0/0:26,0:26:9.41:0,9,44	0/0:21,0:20:1.55:0,2,4	0/0:11,0:21:8.27:0,8,42	0/1:13,0:12:3.92:4,0,19
chr10	52849127	.	CACACACACACAT	C	1701.04	PASS	AB=0.974;AC=19;AF=0.339;AN=56;BaseQRankSum=10.334;DP=759;FS=0.000;HRun=0;HaplotypeScore=224.8019;InbreedingCoeff=0.6704;MQ=59.04;MQ0=12;MQRankSum=-1.095;QD=5.87;ReadPosRankSum=-0.722;VQSLOD=2.3329;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:63.50:0,63,774	0/0:11,0:11:27:0,27,418	0/0:26,0:16:48.10:0,48,554	0/0:35,0:24:71.76:0,72,739	1/1:26,0:26:12.01:188,12,0	1/1:18,0:18:3.01:55,3,0	1/1:27,0:27:6.01:66,6,0	0/0:21,0:20:53.13:0,53,1145	1/1:27,0:27:11.73:221,12,0	1/1:35,0:35:15.14:460,15,0	1/1:21,0:21:12.03:190,12,0	0/0:35,0:35:78.20:0,78,2600	0/0:24,0:24:34.09:0,34,794	1/1:6,19:24:5.18:120,5,0	0/0:41,0:41:91.86:0,92,1693	0/0:29,0:29:66.60:0,67,1293	0/0:26,0:26:63.06:0,63,1904	0/0:21,0:21:57.15:0,57,1790	0/0:15,0:13:35.87:0,36,389	0/0:21,0:21:13.69:0,14,327	0/1:47,0:43:29.58:30,0,900	0/0:27,0:26:66.10:0,66,1809	0/0:22,0:22:36.04:0,36,1227	0/0:41,0:41:62.87:0,63,1478	1/1:37,0:37:15.05:255,15,0	0/1:15,0:14:17.35:147,0,17	0/0:32,0:32:60.36:0,60,902	0/1:11,1:11:72.97:161,0,73
chr10	52849129	.	CACACACACAT	C	3515.95	PASS	AB=0.881;AC=21;AF=0.375;AN=56;BaseQRankSum=11.441;DP=721;FS=8.393;HRun=0;HaplotypeScore=187.1172;InbreedingCoeff=0.6788;MQ=62.09;MQ0=11;MQRankSum=-1.204;QD=12.65;ReadPosRankSum=-0.346;VQSLOD=2.0335;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:36.45:0,36,435	0/0:12,0:12:29.92:0,30,298	0/0:28,0:18:54.11:0,54,591	0/0:35,0:24:71.71:0,72,722	1/1:0,26:26:12.04:369,12,0	1/1:1,15:16:3.01:100,3,0	1/1:0,22:22:6.02:156,6,0	0/0:19,0:19:52.80:0,53,934	1/1:1,23:24:11.73:402,12,0	1/1:1,29:30:87.85:797,88,0	1/1:0,21:21:12.04:370,12,0	0/0:34,0:34:78.18:0,78,2126	0/0:25,0:25:37.24:0,37,701	1/1:21,0:20:6.02:114,6,0	0/0:40,0:40:88.43:0,88,1064	0/0:28,0:28:49.21:0,49,832	0/0:26,0:26:63.06:0,63,1551	0/0:20,0:20:54.08:0,54,1348	0/0:14,0:12:32.85:0,33,278	0/1:19,0:19:99:99,0,187	0/1:45,0:42:99:100,0,606	0/0:28,0:27:69.08:0,69,1485	0/0:22,0:22:36:0,36,1047	0/0:42,0:42:65.60:0,66,1282	1/1:0,31:31:15.05:481,15,0	1/1:1,13:13:35.48:353,35,0	0/0:31,0:31:5.84:0,6,506	0/1:4,5:8:54.76:176,0,55
chr10	52849273	.	C	CAAAA	2965.06	PASS	AB=0.548;AC=9;AF=0.161;AN=56;BaseQRankSum=-3.937;DP=707;FS=15.642;HRun=8;HaplotypeScore=130.2765;InbreedingCoeff=0.8620;MQ=78.19;MQ0=0;MQRankSum=0.211;QD=25.78;ReadPosRankSum=-3.487;VQSLOD=-0.4024;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:84.24:0,84,1271	0/0:8,0:8:24.07:0,24,343	0/0:24,0:24:31.22:0,31,484	0/0:20,0:18:30:0,30,420	0/0:24,0:24:57.12:0,57,821	0/0:32,0:32:66.10:0,66,965	0/0:17,0:17:39.10:0,39,587	0/1:7,0:39:52.11:52,0,69	0/0:24,0:24:51.13:0,51,744	0/0:28,0:28:69.18:0,69,1041	0/0:21,0:21:57.18:0,57,853	0/0:28,0:28:75.21:0,75,1112	0/0:23,0:23:66.17:0,66,947	0/0:16,0:16:36.02:0,36,515	0/0:43,0:43:99:0,111,1647	0/0:26,0:26:75.20:0,75,1105	0/0:24,0:24:66.22:0,66,990	0/0:23,0:23:60.10:0,60,862	1/1:9,14:23:42.13:876,42,0	1/1:2,11:16:42.10:816,42,0	1/1:2,6:8:15.05:332,15,0	0/0:26,0:26:66.18:0,66,976	0/0:30,0:30:84.28:0,84,1266	0/0:39,0:39:99:0,102,1528	0/0:39,0:39:81.10:0,81,1189	0/0:31,0:30:78.22:0,78,1178	1/1:4,20:28:45.62:1053,46,0	0/0:13,0:13:24.05:0,24,363
chr10	52849334	.	G	GGGAGGGGAGAGA	25977.15	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-9.192;DP=708;FS=10.186;HRun=0;HaplotypeScore=211.0792;InbreedingCoeff=0.9992;MQ=61.48;MQ0=1;MQRankSum=-15.688;QD=107.34;ReadPosRankSum=3.372;VQSLOD=4.0745;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,102,3458	0/0:11,0:11:30.09:0,30,1015	0/0:21,0:18:47.56:0,48,1433	0/0:29,0:25:65.75:0,66,1766	1/1:4,13:22:39.13:2168,39,0	1/1:4,26:35:69.24:4219,69,0	1/1:3,11:21:24.08:1364,24,0	0/0:33,0:33:90.07:0,90,2432	1/1:4,12:19:39.13:2223,39,0	1/1:10,20:36:90.31:4355,90,0	1/1:2,11:18:30.10:1844,30,0	0/0:27,0:27:75.24:0,75,2467	0/0:30,0:30:90.31:0,90,3080	1/1:5,10:20:42.14:2357,42,0	0/0:35,0:34:99:0,102,3495	0/0:32,0:32:93.31:0,93,3152	0/0:22,0:22:63.21:0,63,2196	0/0:18,0:18:54.16:0,54,1723	0/0:28,0:28:84.29:0,84,2422	0/0:16,0:16:48.14:0,48,1394	0/0:23,0:23:54.19:0,54,1901	0/0:23,0:23:63.21:0,63,1892	0/0:25,0:25:75.24:0,75,2668	0/0:26,0:26:47.74:0,48,2418	1/1:6,18:29:57.20:3384,57,0	1/1:5,13:22:66.21:3022,66,0	0/0:32,0:32:71.43:0,71,1975	1/1:3,11:19:24.08:1041,24,0
chr10	52850827	.	TC	T	3451.83	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=5.418;DP=607;FS=0.895;HRun=1;HaplotypeScore=71.2589;InbreedingCoeff=0.9976;MQ=79.90;MQ0=0;MQRankSum=-0.440;QD=36.72;ReadPosRankSum=3.248;VQSLOD=4.1143;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:90.67:0,91,1351	0/0:13,0:13:39.12:0,39,552	0/0:18,0:18:54.05:0,54,661	0/0:12,0:12:28.62:0,29,373	0/0:37,0:37:99:0,105,1453	0/0:33,0:33:99:0,99,1370	0/0:17,0:17:51.16:0,51,727	0/0:27,0:27:81.24:0,81,1110	0/0:30,0:30:90.28:0,90,1278	0/0:22,0:22:66.20:0,66,918	0/0:18,0:18:51.17:0,51,746	1/1:0,14:14:36.12:503,36,0	1/1:0,17:17:45.15:627,45,0	0/0:18,0:18:54.18:0,54,790	0/0:25,0:25:75.21:0,75,1036	0/0:22,0:21:66.17:0,66,889	0/0:24,0:24:72.24:0,72,1050	0/0:15,0:15:39.11:0,39,550	0/0:17,0:17:51.17:0,51,730	0/0:34,0:34:99:0,99,1427	0/0:6,0:6:18.04:0,18,240	1/1:0,14:14:36.08:479,36,0	1/1:0,30:30:78.73:1089,79,0	1/1:0,19:19:54.18:753,54,0	0/0:26,0:26:78.22:0,78,1083	0/0:26,0:26:78.26:0,78,1143	0/0:30,0:30:90.22:0,90,1246	0/0:9,0:9:27.07:0,27,374
chr10	52850840	.	G	GT	2722.70	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-10.947;DP=607;FS=0.908;HRun=7;HaplotypeScore=75.6538;InbreedingCoeff=0.9852;MQ=87.03;MQ0=0;MQRankSum=0.111;QD=30.94;ReadPosRankSum=-0.031;VQSLOD=3.5244;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:87.14:0,87,840	0/0:13,0:13:36.05:0,36,348	0/0:20,0:21:45.03:0,45,479	0/0:21,0:21:10.82:0,11,302	0/0:31,0:31:71.61:0,72,694	0/0:28,0:28:81.13:0,81,782	0/0:15,0:15:30.04:0,30,290	0/0:33,0:33:81.12:0,81,782	0/0:29,0:29:63.08:0,63,608	0/0:20,0:20:54.09:0,54,521	0/0:18,0:18:48.08:0,48,463	0/0:13,0:13:36.04:0,36,340	0/0:16,0:16:45.07:0,45,435	0/0:25,0:25:63.08:0,63,602	0/0:21,0:21:54.06:0,54,516	0/0:21,0:20:51.07:0,51,487	0/0:27,0:27:69.08:0,69,659	0/0:13,0:13:33:0,33,309	1/1:2,17:19:51.14:603,51,0	1/1:2,31:35:96.12:1120,96,0	1/1:2,5:7:18.06:217,18,0	0/0:14,0:14:33.04:0,33,319	0/0:28,0:28:65.36:0,65,631	0/0:19,0:19:48.08:0,48,463	0/0:24,0:24:60.04:0,60,566	0/0:28,0:28:66.09:0,66,631	1/1:1,26:27:78.24:942,78,0	0/0:8,0:8:21.03:0,21,203
chr10	52852882	.	T	TA	648.33	PASS	AB=0.500;AC=33;AF=0.917;AN=36;BaseQRankSum=-0.758;DP=45;FS=0.000;HRun=0;HaplotypeScore=20.8730;InbreedingCoeff=0.0842;MQ=26.89;MQ0=5;MQRankSum=1.191;QD=16.21;ReadPosRankSum=1.300;VQSLOD=4.8073;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	0/0:0,1:1:0:0,0,0	./.	./.	1/1:0,6:6:14.77:144,15,0	1/1:0,3:3:9.01:84,9,0	1/1:1,1:1:3:28,3,0	1/1:1,1:1:2.88:15,3,0	1/1:0,1:1:3:28,3,0	1/1:0,6:6:17.24:90,17,0	1/1:0,4:4:2.75:27,3,0	1/1:0,2:2:3:28,3,0	1/1:0,4:4:12.01:111,12,0	1/1:0,1:1:3:28,3,0	./.	./.	./.	./.	1/1:0,1:1:2.84:14,3,0	1/1:0,1:1:2.60:10,3,0	./.	./.	1/1:0,1:1:3:28,3,0	0/1:0,1:1:0:0,0,0	./.	1/1:0,2:2:1.33:14,1,0	1/1:0,1:1:3:29,3,0	1/1:0,2:2:5.91:44,6,0
chr10	52852888	.	TG	T	824.19	PASS	AC=34;AF=1.000;AN=34;BaseQRankSum=-0.890;DP=51;FS=0.000;HRun=1;HaplotypeScore=19.9521;InbreedingCoeff=-0.0860;MQ=25.26;MQ0=11;MQRankSum=-0.515;QD=18.73;ReadPosRankSum=1.358;VQSLOD=3.6705;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	1/1:0,1:1:3.01:37,3,0	./.	./.	1/1:0,6:6:17.91:171,18,0	1/1:0,3:3:9.01:86,9,0	1/1:1,1:1:3:29,3,0	1/1:2,1:1:2.88:15,3,0	1/1:1,1:1:3:29,3,0	1/1:1,6:6:17.33:92,17,0	1/1:0,4:4:12.03:140,12,0	1/1:0,2:2:3:28,3,0	1/1:1,3:4:11.76:99,12,0	1/1:1,1:1:3:29,3,0	./.	./.	./.	./.	1/1:0,1:1:2.88:15,3,0	1/1:0,1:1:2.60:10,3,0	./.	./.	1/1:0,1:1:3:29,3,0	./.	./.	1/1:0,2:2:1.52:14,2,0	1/1:0,1:1:3.01:30,3,0	1/1:0,2:2:5.93:44,6,0
chr10	52853401	.	CT	C	10902.05	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=13.067;DP=681;FS=0.000;HRun=4;HaplotypeScore=85.3899;InbreedingCoeff=0.9919;MQ=55.77;MQ0=2;MQRankSum=0.230;QD=31.51;ReadPosRankSum=2.365;VQSLOD=5.2147;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,126,1709	0/0:3,0:3:9.03:0,9,126	0/0:27,0:23:66.16:0,66,842	0/0:32,0:30:84.27:0,84,1098	1/1:0,24:24:66.20:790,66,0	1/1:0,22:22:63.19:756,63,0	1/1:0,24:24:63.15:740,63,0	1/1:2,36:36:99:1137,99,0	1/1:2,18:20:45.14:539,45,0	1/1:0,15:15:45.14:540,45,0	1/1:0,17:17:42.04:483,42,0	0/0:24,0:24:69.18:0,69,924	0/0:23,0:23:66.18:0,66,887	1/1:1,15:16:42.13:504,42,0	0/0:40,0:40:99:0,114,1514	0/0:22,0:22:66.22:0,66,924	0/0:43,0:43:99:0,114,1540	0/0:20,0:20:41.31:0,41,778	1/1:1,13:14:36.09:419,36,0	1/1:1,20:21:57.17:684,57,0	1/1:3,51:54:99:1692,141,0	0/0:15,0:15:45.08:0,45,606	0/0:18,0:18:54.10:0,54,697	0/0:24,0:24:60.20:0,60,839	1/1:0,11:11:33.07:381,33,0	1/1:0,25:25:72.21:853,72,0	1/1:0,29:29:78.24:935,78,0	1/1:3,13:16:39.07:451,39,0
chr10	52853777	.	TG	T	8242.92	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=16.342;DP=639;FS=8.405;HRun=2;HaplotypeScore=60.4639;InbreedingCoeff=0.9490;MQ=68.23;MQ0=0;MQRankSum=0.684;QD=34.20;ReadPosRankSum=1.546;VQSLOD=4.8052;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:54.18:0,54,809	0/0:9,0:9:24.08:0,24,358	0/0:8,0:8:20.66:0,21,295	0/1:11,0:11:2.69:3,0,140	1/1:0,43:43:99:1615,126,0	1/1:1,32:33:90.29:1167,90,0	1/1:0,19:19:51.17:662,51,0	0/0:22,0:22:60.20:0,60,899	1/1:0,11:11:33.11:428,33,0	1/1:0,18:18:54.16:687,54,0	1/1:0,22:22:63.20:814,63,0	0/0:24,0:24:72.23:0,72,1058	0/0:26,0:26:78.25:0,78,1149	1/1:0,17:17:48.16:623,48,0	0/0:28,0:28:81.26:0,81,1194	0/0:26,0:26:78.25:0,78,1148	0/0:29,0:29:87.29:0,87,1302	0/0:17,0:17:51.13:0,51,716	0/0:14,0:14:42.14:0,42,629	0/0:41,0:41:99:0,123,1800	0/0:26,0:26:75.25:0,75,1122	0/0:23,0:23:69.23:0,69,1034	0/0:31,0:31:93.31:0,93,1382	0/0:14,0:14:38.16:0,38,546	1/1:0,24:24:57.19:740,57,0	1/1:0,30:30:90.28:1154,90,0	0/0:41,0:41:99:0,123,1813	1/1:0,13:13:27.09:351,27,0
chr10	52855137	.	G	GTGTAATAC	19307.44	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-7.448;DP=593;FS=10.140;HRun=0;HaplotypeScore=139.3532;InbreedingCoeff=0.9995;MQ=81.90;MQ0=0;MQRankSum=-17.244;QD=101.09;ReadPosRankSum=-3.968;VQSLOD=4.6022;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,114,3131	0/0:9,0:9:27.09:0,27,774	0/0:13,0:13:39.13:0,39,1022	0/0:25,0:25:62.02:0,62,1724	1/1:4,20:26:69.17:2431,69,0	1/1:2,9:13:27.09:1198,27,0	1/1:4,12:19:45.15:1904,45,0	0/0:35,0:35:90.29:0,90,2301	1/1:3,13:16:45.15:1933,45,0	1/1:8,11:20:51.17:2084,51,0	1/1:4,15:20:48.16:1893,48,0	0/0:19,0:19:57.20:0,57,1636	0/0:26,0:26:78.25:0,78,2167	1/1:5,18:25:69.24:2834,69,0	0/0:23,0:23:69.24:0,69,1980	0/0:20,0:20:57.20:0,57,1636	0/0:30,0:30:81.28:0,81,2310	0/0:13,0:13:39.11:0,39,1014	0/0:23,0:23:63.21:0,63,1714	0/0:29,0:29:84.26:0,84,2272	0/0:34,0:34:99:0,99,2737	0/0:13,0:13:39.13:0,39,1118	0/0:17,0:17:48.16:0,48,1342	0/0:14,0:14:36.12:0,36,1033	1/1:8,14:24:63.21:2264,63,0	1/1:5,11:17:45.15:1813,45,0	0/0:18,0:18:51.18:0,51,1457	1/1:5,5:11:27.09:952,27,0
chr10	52855272	.	CATTTACTCCTTAACCGA	C	10852.88	PASS	AB=0.958;AC=21;AF=0.375;AN=56;BaseQRankSum=13.080;DP=386;FS=18.928;HRun=0;HaplotypeScore=178.4039;InbreedingCoeff=0.8978;MQ=81.04;MQ0=0;MQRankSum=-12.233;QD=88.23;ReadPosRankSum=2.317;VQSLOD=3.5481;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:57.20:0,57,4187	0/0:6,0:6:18.06:0,18,1464	0/0:11,0:11:27.09:0,27,1585	0/0:12,0:12:33.11:0,33,1863	1/1:1,13:14:33.11:1570,33,0	1/1:3,9:12:15.05:745,15,0	1/1:1,8:9:18.06:894,18,0	0/0:26,0:26:72.25:0,72,4582	1/1:2,8:10:24.08:1191,24,0	1/1:2,8:10:21.07:954,21,0	1/1:0,5:5:12.04:569,12,0	0/0:16,0:16:48.16:0,48,3830	0/0:19,0:19:57.20:0,57,4377	1/1:1,6:7:18.06:893,18,0	0/0:21,0:21:60.19:0,60,4196	0/1:22,1:23:79.72:80,0,5111	0/0:28,0:28:75.26:0,75,5951	0/0:22,0:22:66.20:0,66,5087	0/0:15,0:15:42.14:0,42,3118	0/0:15,0:15:42.14:0,42,3489	0/0:6,0:6:18.06:0,18,1292	0/0:4,0:4:9.03:0,9,753	0/0:5,0:5:12.04:0,12,998	0/0:12,0:12:36.12:0,36,2775	1/1:2,9:11:24.08:1192,24,0	1/1:0,12:12:36.11:1574,36,0	0/0:26,0:26:72.25:0,72,5511	1/1:2,8:10:24.08:1192,24,0
chr10	52855507	.	A	ATATATATTAT	3682.01	PASS	AB=1.000;AC=28;AF=0.560;AN=50;BaseQRankSum=-0.662;DP=253;FS=18.890;HRun=0;HaplotypeScore=80.9971;InbreedingCoeff=0.4818;MQ=70.23;MQ0=3;MQRankSum=-4.252;QD=23.30;ReadPosRankSum=-1.426;VQSLOD=0.9929;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,0:4:3.01:41,3,0	1/1:3,0:3:3.90:43,4,0	./.	0/1:25,0:14:6.31:6,0,114	1/1:0,6:8:15.05:327,15,0	1/1:0,4:4:6.02:313,6,0	1/1:3,0:3:6.02:83,6,0	0/1:47,0:47:81.68:82,0,926	1/1:2,3:6:6.02:313,6,0	1/1:2,5:7:12.04:353,12,0	1/1:0,1:4:2.97:20,3,0	0/0:6,0:6:18.05:0,18,389	0/0:5,0:5:15.05:0,15,427	1/1:1,5:6:9.03:352,9,0	0/1:7,0:6:38.59:73,0,39	0/1:8,0:8:43.86:133,0,44	0/0:26,0:26:72.20:0,72,1988	0/0:11,0:11:30.07:0,30,792	0/0:16,0:16:44.34:0,44,903	0/0:3,0:3:8.24:0,8,154	./.	0/0:1,0:1:3.01:0,3,48	./.	0/0:3,0:3:6.02:0,6,133	1/1:3,0:4:12.02:135,12,0	1/1:0,2:4:9:219,9,0	0/0:15,0:15:36.12:0,36,853	1/1:0,14:17:24.08:1188,24,0
chr10	52856335	.	C	CCTTCACA	21033.16	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=18.981;DP=783;FS=10.115;HRun=0;HaplotypeScore=266.5741;InbreedingCoeff=0.9999;MQ=85.99;MQ0=0;MQRankSum=-19.717;QD=82.81;ReadPosRankSum=0.074;VQSLOD=3.7197;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,151,3693	0/0:11,0:11:30.10:0,30,754	0/0:31,0:31:63.21:0,63,1473	0/0:29,0:29:75.22:0,75,1700	1/1:13,11:24:57.18:1841,57,0	1/1:9,7:16:45.15:1435,45,0	1/1:19,15:34:81.28:2766,81,0	0/0:43,0:43:99:0,108,2371	1/1:12,13:25:69.24:2384,69,0	1/1:29,13:41:96.31:2984,96,0	1/1:8,5:14:39.12:1094,39,0	0/0:33,0:33:90.30:0,90,2170	0/0:30,0:30:81.28:0,81,2011	1/1:9,20:29:72.25:2546,72,0	0/0:26,0:26:75.26:0,75,1829	0/0:43,0:43:99:0,111,2674	0/0:37,0:37:99:0,105,2517	0/0:15,0:15:39.13:0,39,960	0/0:26,0:26:69.21:0,69,1544	0/0:24,0:24:63.22:0,63,1576	0/0:26,0:25:75.24:0,75,1685	0/0:29,0:29:84.29:0,84,2104	0/0:24,0:24:57.20:0,57,1412	0/0:29,0:29:84.29:0,84,2114	1/1:8,9:17:45.15:1411,45,0	1/1:9,24:34:90.27:3123,90,0	0/0:20,0:20:45.15:0,45,1115	1/1:8,11:19:42.14:1449,42,0
chr10	52856342	.	G	GGCAAGT	20290.64	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=18.059;DP=741;FS=2.065;HRun=0;HaplotypeScore=241.6037;InbreedingCoeff=0.9975;MQ=85.14;MQ0=0;MQRankSum=-19.300;QD=87.46;ReadPosRankSum=1.107;VQSLOD=4.9843;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,157,3737	0/0:10,0:10:30.10:0,30,733	0/0:27,0:27:78.23:0,78,1750	0/0:27,0:27:80.98:0,81,1728	1/1:7,11:19:45.15:1374,45,0	1/1:8,7:16:45.15:1531,45,0	1/1:8,15:23:63.22:2018,63,0	0/0:40,0:40:99:0,105,2464	1/1:12,13:29:72.29:2644,72,0	1/1:20,13:32:64.44:2585,64,0	1/1:11,6:17:15.15:1198,15,0	0/0:31,0:31:90.31:0,90,2216	0/0:30,0:30:90.29:0,90,2138	1/1:13,20:33:96.33:3239,96,0	0/0:28,0:28:78.27:0,78,1878	0/0:39,0:39:99:0,114,2751	0/0:34,0:34:99:0,99,2429	0/0:16,0:16:45.15:0,45,1107	0/0:23,0:23:66.21:0,66,1502	0/0:23,0:23:69.23:0,69,1637	0/0:25,0:24:72.16:0,72,1584	0/0:29,0:29:87.30:0,87,2109	0/0:22,0:22:60.21:0,60,1453	0/0:34,0:34:99:0,102,2339	1/1:10,9:19:32.44:1662,32,0	1/1:7,25:32:74.70:3026,75,0	0/0:19,0:19:57.16:0,57,1288	1/1:0,11:11:30.10:1014,30,0
chr10	52859224	.	TACAC	T	2082.60	PASS	AB=0.838;AC=39;AF=0.780;AN=50;BaseQRankSum=3.683;DP=521;FS=0.863;HRun=0;HaplotypeScore=107.5523;InbreedingCoeff=0.3717;MQ=71.73;MQ0=10;MQRankSum=-2.389;QD=5.61;ReadPosRankSum=1.954;VQSLOD=2.3262;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:34:15.02:139,15,0	1/1:4,0:6:6.01:56,6,0	./.	./.	1/1:16,3:20:5.69:92,6,0	1/1:11,4:14:6.49:93,6,0	0/1:20,4:25:3.41:84,0,3	0/0:28,0:28:4.68:0,5,24	1/1:9,4:12:3.01:46,3,0	0/1:16,1:17:33.16:76,0,33	0/0:6,0:7:2.80:0,3,70	0/1:9,4:13:3.42:84,0,3	1/1:17,4:21:9.50:140,9,0	1/1:12,2:14:3.01:47,3,0	1/1:7,0:18:24.03:223,24,0	1/1:7,0:12:16.83:142,17,0	0/0:17,0:26:41.87:0,42,751	0/0:17,0:18:27.63:0,28,434	./.	1/1:8,0:16:15.01:137,15,0	1/1:42,0:43:2.94:28,3,0	1/1:11,1:12:3.01:46,3,0	1/1:6,2:8:3.01:46,3,0	1/1:19,8:27:18.06:278,18,0	1/1:6,5:12:12.03:152,12,0	1/1:13,5:17:3:46,3,0	1/1:7,0:14:14.98:132,15,0	1/1:7,3:10:9.03:139,9,0
chr10	52860090	.	GC	G	2578.49	PASS	AB=0.800;AC=28;AF=0.500;AN=56;BaseQRankSum=0.959;DP=388;FS=28.119;HRun=10;HaplotypeScore=50.4813;InbreedingCoeff=0.7909;MQ=79.12;MQ0=0;MQRankSum=-0.330;QD=13.64;ReadPosRankSum=1.788;VQSLOD=1.6102;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:26:32.10:0,32,325	0/0:5,0:5:12.03:0,12,132	0/0:20,0:18:36.08:0,36,304	0/1:13,1:14:22.59:23,0,140	1/1:3,9:12:24.88:231,25,0	1/1:2,14:16:16.41:290,16,0	1/1:13,5:18:1.08:113,1,0	0/0:5,0:11:14.71:0,15,72	1/1:5,10:15:14.08:219,14,0	1/1:0,9:9:26.99:234,27,0	1/1:1,9:10:23.94:201,24,0	0/0:15,0:15:33.07:0,33,355	0/0:11,0:11:27.04:0,27,274	1/1:1,8:9:11.99:104,12,0	0/0:19,0:19:54.11:0,54,573	0/0:9,1:10:3.98:0,4,250	0/0:28,0:28:80.92:0,81,815	0/0:17,0:17:45.10:0,45,483	1/1:2,6:8:17.92:144,18,0	1/1:2,9:12:26.02:212,26,0	1/1:5,22:27:14.92:358,15,0	0/0:5,0:6:17.82:0,18,170	0/0:8,0:8:14.71:0,15,165	0/0:23,0:23:57.12:0,57,612	0/1:3,3:6:5.87:66,0,6	1/1:4,11:15:30.05:278,30,0	1/1:3,6:9:14.68:151,15,0	1/1:1,8:9:12.06:171,12,0
chr10	52860129	.	AGTGTGTGT	A	534.91	PASS	AB=0.829;AC=16;AF=0.348;AN=46;BaseQRankSum=3.310;DP=421;FS=4.504;HRun=0;HaplotypeScore=111.4867;InbreedingCoeff=0.4060;MQ=66.84;MQ0=18;MQRankSum=-4.931;QD=3.34;ReadPosRankSum=0.940;VQSLOD=1.8742;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:24:2.89:16,3,0	0/1:4,1:5:0.05:78,0,0	./.	./.	0/0:13,0:13:9:0,9,104	0/0:13,0:13:9:0,9,86	0/0:16,0:17:15.07:0,15,144	./.	0/0:9,0:11:17.93:0,18,174	0/0:13,0:13:16.86:0,17,201	0/0:9,0:8:6.01:0,6,67	0/1:8,1:12:13.12:94,0,13	./.	0/0:16,0:16:9.03:0,9,148	0/1:15,0:17:6.93:7,0,39	1/1:14,1:14:3:74,3,0	1/1:20,8:29:9.03:222,9,0	1/1:15,3:18:5.93:91,6,0	./.	0/0:8,0:9:12.02:0,12,241	0/0:27,0:25:15.05:0,15,529	1/1:4,0:5:2.68:11,3,0	1/1:9,0:9:0.47:1,0,0	0/1:21,1:25:26.98:81,0,27	0/0:10,0:12:18.03:0,18,238	0/0:19,0:19:18.05:0,18,294	0/0:12,0:11:15.05:0,15,290	0/0:5,0:5:3:0,3,25
chr10	52861168	.	A	AACAC	5356.43	PASS	AB=0.776;AC=43;AF=0.796;AN=54;BaseQRankSum=0.966;DP=681;FS=4.088;HRun=0;HaplotypeScore=131.0878;InbreedingCoeff=0.1391;MQ=61.90;MQ0=19;MQRankSum=-1.421;QD=8.61;ReadPosRankSum=-1.445;VQSLOD=3.7740;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:5,0:28:8.86:103,9,0	1/1:4,0:4:0.47:1,0,0	1/1:30,0:10:2.49:6,2,0	./.	0/1:18,8:26:33.43:204,0,33	1/1:11,4:18:11.51:167,12,0	1/1:18,8:31:15.52:339,16,0	1/1:20,0:20:19.84:312,20,0	0/1:15,12:27:22.30:414,0,22	1/1:10,11:25:38.83:596,39,0	1/1:11,6:21:20.54:380,21,0	0/1:20,0:32:55.32:55,0,343	1/1:14,0:25:16.23:76,16,0	0/0:8,0:24:26.45:0,26,251	1/1:9,0:35:27.09:436,27,0	1/1:9,0:26:30.72:500,31,0	0/0:12,0:12:18.02:0,18,237	0/1:13,0:15:69.60:70,0,352	1/1:11,0:12:2.74:12,3,0	1/1:32,1:42:5.05:59,5,0	1/1:18,12:31:3.01:71,3,0	0/1:20,0:30:52.41:52,0,113	0/1:11,0:14:17.44:17,0,19	0/1:13,0:38:99:175,0,121	1/1:11,9:23:17.62:311,18,0	1/1:12,9:21:28.49:397,28,0	1/1:17,8:27:20.96:334,21,0	1/1:9,3:13:14.79:270,15,0
chr10	52864775	.	GCACA	G	800.93	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.715;DP=755;FS=4.794;HRun=0;HaplotypeScore=120.0741;InbreedingCoeff=0.9448;MQ=83.58;MQ0=0;MQRankSum=-3.064;QD=28.60;ReadPosRankSum=-4.479;VQSLOD=2.5509;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:39:99:0,117,3114	0/0:10,0:10:30.10:0,30,822	0/0:28,0:28:84.29:0,84,2214	0/0:17,0:17:41.52:0,42,1072	0/0:24,0:24:72.25:0,72,1973	0/0:30,0:30:87.30:0,87,2349	0/0:27,0:27:78.27:0,78,2102	1/1:11,17:28:51.15:896,51,0	0/0:34,0:34:99:0,102,2794	0/0:34,0:34:99:0,99,2713	0/0:17,0:17:48.16:0,48,1315	0/0:26,0:26:78.27:0,78,2137	0/0:36,0:36:99:0,102,2738	0/0:36,0:36:99:0,108,2801	0/0:29,0:29:84.29:0,84,2268	0/0:45,0:45:99:0,132,3601	0/0:36,0:36:99:0,108,2920	0/0:18,0:18:54.18:0,54,1436	0/0:19,0:19:57.20:0,57,1531	0/0:25,0:25:69.24:0,69,1881	0/0:22,0:22:63.22:0,63,1661	0/0:22,0:22:63.22:0,63,1706	0/0:24,0:24:66.23:0,66,1770	0/0:28,0:28:81.28:0,81,2219	0/0:33,0:33:99:0,99,2628	0/0:31,0:31:90.31:0,90,2466	0/0:32,0:31:96.33:0,96,2629	0/0:4,0:4:9.03:0,9,247
chr10	52865179	.	TAAAC	T	8739.12	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=18.686;DP=773;FS=3.287;HRun=0;HaplotypeScore=155.2824;InbreedingCoeff=0.9969;MQ=83.23;MQ0=0;MQRankSum=-17.375;QD=38.84;ReadPosRankSum=0.907;VQSLOD=4.7123;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,111,2922	0/0:16,0:16:45.15:0,45,1173	0/0:28,0:28:77.63:0,78,1864	0/0:25,0:25:75.25:0,75,1810	0/0:26,0:26:72.25:0,72,1843	0/0:19,0:19:48.16:0,48,1264	0/0:29,0:29:81.28:0,81,2107	0/0:33,0:33:78.27:0,78,2007	0/0:40,0:40:99:0,120,3156	0/0:30,0:30:84.28:0,84,2165	0/0:30,0:30:78.27:0,78,2060	1/1:3,23:26:66.23:1211,66,0	1/1:3,28:31:66.23:1211,66,0	0/0:31,0:31:93.28:0,93,2382	0/0:30,0:30:87.30:0,87,2250	0/0:32,0:32:96.33:0,96,2516	0/0:37,0:37:99:0,111,2903	0/0:23,0:23:66.23:0,66,1735	1/1:4,13:17:39.11:684,39,0	1/1:2,31:34:90.31:1643,90,0	1/1:6,11:17:15.05:275,15,0	1/1:3,26:29:72.25:1313,72,0	1/1:3,23:26:51.17:936,51,0	1/1:5,15:20:22.78:438,23,0	0/0:28,0:28:84.29:0,84,2219	0/0:42,0:42:99:0,117,3069	1/1:6,19:25:57.19:1028,57,0	0/0:10,0:10:27.09:0,27,707
chr10	52865321	.	T	TAAA	19233.41	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-6.708;DP=720;FS=2.288;HRun=8;HaplotypeScore=104.9844;InbreedingCoeff=0.9943;MQ=81.68;MQ0=1;MQRankSum=-4.065;QD=38.31;ReadPosRankSum=-0.390;VQSLOD=4.3695;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,14:25:48.16:932,48,0	1/1:2,4:6:12.04:222,12,0	0/0:26,0:26:48.07:0,48,611	0/0:17,0:17:33:0,33,395	1/1:6,27:33:78.27:1488,78,0	1/1:9,16:26:45.13:844,45,0	1/1:7,14:24:42.08:736,42,0	1/1:8,20:28:66.23:1284,66,0	1/1:10,37:48:93.32:1869,93,0	1/1:5,27:34:93.32:1774,93,0	1/1:2,15:17:48.16:960,48,0	0/0:33,0:33:96.30:0,96,1246	0/0:27,0:27:66.13:0,66,837	1/1:6,22:28:63.17:1210,63,0	1/1:4,34:38:93.32:1878,93,0	1/1:5,23:31:64.10:1214,64,0	0/0:23,0:23:54.13:0,54,695	0/0:17,0:17:42.13:0,42,552	1/1:6,0:28:68.74:548,69,0	1/1:3,0:32:83.68:646,84,0	1/1:5,0:17:32.88:254,33,0	0/0:24,0:25:75.18:0,75,962	0/0:29,0:29:84.24:0,84,1071	0/0:21,0:21:54.16:0,54,710	1/1:3,9:12:27.09:540,27,0	1/1:10,29:42:99:1927,102,0	1/1:2,0:24:62.75:483,63,0	1/1:0,8:8:21.07:424,21,0
chr10	52865756	.	GT	G	2562.18	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=11.397;DP=566;FS=2.035;HRun=5;HaplotypeScore=49.8638;InbreedingCoeff=0.9963;MQ=75.05;MQ0=0;MQRankSum=-0.607;QD=29.79;ReadPosRankSum=1.042;VQSLOD=3.9628;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:54.14:0,54,717	0/0:10,0:10:30.10:0,30,410	0/0:13,0:13:36.09:0,36,450	0/0:10,0:10:27.09:0,27,369	0/0:34,0:34:96.30:0,96,1282	0/0:21,0:21:63.21:0,63,861	0/0:13,0:13:33.11:0,33,451	0/0:36,0:36:99:0,99,1353	0/0:19,0:19:54.18:0,54,739	0/0:26,0:26:72.24:0,72,985	0/0:19,0:19:51.17:0,51,697	0/0:15,0:15:45.14:0,45,599	0/0:25,0:25:72.24:0,72,981	0/0:15,0:15:42.14:0,42,574	0/0:19,0:19:51.16:0,51,682	0/0:15,0:15:45.15:0,45,616	0/0:21,0:21:60.20:0,60,821	0/0:7,0:7:18.06:0,18,246	1/1:2,15:17:45.13:510,45,0	1/1:0,23:23:66.19:749,66,0	1/1:0,8:8:24.07:272,24,0	0/0:9,0:9:27.08:0,27,353	0/0:24,0:24:72.23:0,72,969	0/0:13,0:13:39.13:0,39,533	0/0:37,0:37:99:0,102,1378	0/0:27,0:27:81.27:0,81,1108	1/1:0,38:38:99:1191,105,0	0/0:33,0:33:96.32:0,96,1313
chr10	52867423	.	TAC	T	96.97	PASS	AB=0.979;AC=6;AF=0.107;AN=56;BaseQRankSum=2.627;DP=614;FS=0.000;HRun=0;HaplotypeScore=126.2163;InbreedingCoeff=0.2223;MQ=82.32;MQ0=0;MQRankSum=-2.719;QD=0.94;ReadPosRankSum=-6.466;VQSLOD=-0.7623;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:52.19:0,52,469	0/0:8,0:8:24.03:0,24,230	0/0:15,0:15:33.16:0,33,736	0/0:21,0:21:50.17:0,50,946	0/0:28,0:28:78.79:0,79,735	0/0:17,0:17:48.51:0,49,447	0/0:16,0:16:41.58:0,42,362	0/1:26,0:26:31.73:60,0,32	0/0:20,0:20:59.91:0,60,524	0/0:26,0:26:71.64:0,72,583	0/0:32,0:32:83.92:0,84,800	0/1:18,0:18:3.80:45,0,4	0/1:22,1:23:30.32:30,0,50	0/0:19,0:19:52.86:0,53,467	0/0:32,0:32:90.03:0,90,803	0/0:36,0:36:99:0,104,932	0/0:26,0:26:56.64:0,57,609	0/0:15,0:15:37:0,37,352	0/0:28,0:28:84.29:0,84,1562	0/0:22,0:22:63.21:0,63,1155	0/0:20,0:20:60.21:0,60,1109	0/0:13,0:13:8.04:0,8,43	0/1:22,1:23:28.19:28,0,29	1/1:11,2:13:2.39:53,2,0	0/0:24,0:24:62.79:0,63,609	0/0:31,0:31:82.58:0,83,702	0/0:32,0:32:96.33:0,96,1760	0/0:10,0:10:30.03:0,30,277
chr10	52867424	.	A	AT	3114.87	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-1.881;DP=620;FS=3.526;HRun=3;HaplotypeScore=104.0549;InbreedingCoeff=0.9927;MQ=83.33;MQ0=0;MQRankSum=0.334;QD=26.62;ReadPosRankSum=-2.406;VQSLOD=2.2804;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:12.08:0,12,284	0/0:8,0:8:23.47:0,23,142	0/0:16,0:16:44.93:0,45,557	0/0:22,0:22:41.93:0,42,648	0/0:28,0:28:74.60:0,75,442	0/0:17,0:17:44.78:0,45,255	0/0:16,0:16:43.61:0,44,228	1/1:4,24:28:70.83:792,71,0	0/0:18,0:18:52.31:0,52,295	0/0:27,0:27:44.37:0,44,302	0/0:32,0:32:84.85:0,85,521	1/1:3,15:18:45.09:507,45,0	1/1:3,19:22:57.36:696,57,0	0/0:19,0:19:49.10:0,49,268	0/0:31,0:31:88.17:0,88,480	0/0:38,0:38:99:0,101,562	0/0:26,0:26:65.44:0,65,406	0/0:14,0:14:40.67:0,41,229	0/0:28,0:28:84.28:0,84,1175	0/0:22,0:22:63.21:0,63,876	0/0:21,0:21:60.20:0,60,838	1/1:0,13:13:28.32:354,28,0	1/1:3,20:23:53.67:656,54,0	1/1:3,10:13:25.04:297,25,0	0/0:26,0:26:63.77:0,64,371	0/0:31,0:31:84.18:0,84,432	0/0:33,0:33:96.27:0,96,1314	0/0:10,0:10:29.15:0,29,167
chr10	52867773	.	C	CTG	827.85	PASS	AB=0.932;AC=17;AF=0.354;AN=48;BaseQRankSum=-5.164;DP=585;FS=2.863;HRun=0;HaplotypeScore=88.4793;InbreedingCoeff=0.0490;MQ=64.08;MQ0=8;MQRankSum=0.846;QD=2.99;ReadPosRankSum=0.537;VQSLOD=2.1059;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:28:30.43:30,0,72	0/1:7,0:7:0:0,0,0	./.	./.	0/0:24,0:27:13.07:0,13,66	0/0:15,0:20:2.60:0,3,10	0/1:18,0:22:19.35:29,0,19	0/0:22,0:22:2.98:0,3,21	0/0:14,0:23:14.20:0,14,70	0/0:21,0:21:6.31:0,6,41	0/0:25,0:27:9.91:0,10,47	0/1:10,7:17:14.37:80,0,14	0/1:17,0:17:9.31:65,0,9	0/0:18,0:19:2.84:0,3,14	0/0:16,0:16:2.99:0,3,23	0/0:21,0:24:11.86:0,12,111	1/1:15,16:31:8.69:115,9,0	1/1:12,0:12:7.27:92,7,0	1/1:17,4:21:14.02:108,14,0	0/1:29,0:29:44.53:54,0,45	0/1:32,0:33:42.61:175,0,43	./.	1/1:15,2:18:3.01:44,3,0	0/1:20,0:19:12.40:61,0,12	0/0:18,0:25:18.03:0,18,126	0/0:22,0:26:2.30:0,2,13	0/1:11,9:19:20.29:121,0,20	./.
chr10	52868663	.	A	AGG	754.09	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=1.989;DP=576;FS=10.490;HRun=7;HaplotypeScore=68.1839;InbreedingCoeff=0.9752;MQ=84.89;MQ0=0;MQRankSum=-4.315;QD=19.34;ReadPosRankSum=-2.149;VQSLOD=0.4412;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:54.07:0,54,601	0/0:9,0:9:24.07:0,24,280	0/0:22,0:21:35.69:0,36,530	0/0:18,0:19:33.40:0,33,348	0/0:22,0:22:54.15:0,54,628	0/0:21,0:21:51.14:0,51,594	0/0:18,0:18:54.14:0,54,617	1/1:4,2:18:31.53:165,32,0	0/0:19,0:19:48.14:0,48,559	0/0:25,0:25:63.17:0,63,733	0/0:22,0:22:60.15:0,60,677	0/0:27,0:27:72.20:0,72,839	0/0:26,0:26:78.23:0,78,909	0/0:16,0:16:48.14:0,48,559	0/0:26,0:26:44.59:0,45,734	0/0:22,0:22:63.18:0,63,733	1/1:2,15:18:41.59:619,42,0	1/1:0,2:3:8.52:107,9,0	0/0:20,0:20:54.13:0,54,613	0/0:32,0:32:87.24:0,87,1011	0/0:25,0:25:69.17:0,69,790	0/0:25,0:25:72.21:0,72,839	0/0:24,0:24:66.17:0,66,757	0/0:15,0:15:33.09:0,33,385	0/0:22,0:22:48.10:0,48,545	0/0:26,0:26:72.21:0,72,838	0/0:21,0:19:57.16:0,57,659	0/0:12,0:12:30.09:0,30,349
chr10	52870231	.	A	AAAGTCAGCTTGC	86670.80	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-4.742;DP=667;FS=0.604;HRun=0;HaplotypeScore=203.8677;InbreedingCoeff=0.8954;MQ=72.00;MQ0=0;MQRankSum=-9.736;QD=139.34;ReadPosRankSum=6.164;VQSLOD=5.2915;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,12:25:57.20:3270,57,0	1/1:7,3:12:27.06:1191,27,0	0/0:23,0:23:35.45:0,35,2030	0/0:22,0:22:56.81:0,57,1483	1/1:8,21:31:84.28:4742,84,0	1/1:16,13:34:81.28:4314,81,0	1/1:11,8:21:54.18:2895,54,0	1/1:35,11:51:99:6607,126,0	1/1:11,16:27:75.26:4361,75,0	1/1:9,13:25:75.23:3783,75,0	1/1:7,14:22:57.19:3158,57,0	1/1:8,17:31:66.23:3901,66,0	1/1:9,25:41:99:6139,105,0	1/1:8,18:30:78.27:4701,78,0	1/1:15,14:30:69.24:3956,69,0	1/1:9,10:21:57.19:3191,57,0	1/1:2,8:11:30.10:1753,30,0	1/1:4,2:6:12.04:715,12,0	1/1:10,9:21:53.03:2664,53,0	1/1:13,19:35:87.30:5088,87,0	1/1:6,2:14:15.05:818,15,0	1/1:8,6:16:39.13:2119,39,0	1/1:10,13:24:63.21:3573,63,0	1/1:6,6:12:33.11:1657,33,0	1/1:6,15:24:63.22:3526,63,0	1/1:3,15:22:66.23:3497,66,0	1/1:10,18:33:84.29:4869,84,0	1/1:0,1:3:3.01:186,3,0
chr10	52870675	.	AGATAGATAGATAGATT	A	2224.11	PASS	AB=1.000;AC=25;AF=0.446;AN=56;BaseQRankSum=4.140;DP=672;FS=0.460;HRun=0;HaplotypeScore=290.0444;InbreedingCoeff=0.3946;MQ=57.57;MQ0=13;MQRankSum=-6.486;QD=5.70;ReadPosRankSum=3.721;VQSLOD=1.7009;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:31,0:31:3.78:100,4,0	1/1:11,0:11:9.03:111,9,0	0/0:34,0:17:15.01:0,15,222	0/0:25,0:12:12.42:0,12,104	0/1:39,0:39:27.81:28,0,90	1/1:3,20:23:6.02:269,6,0	1/1:4,12:16:2.80:13,3,0	0/1:39,0:38:99:198,0,617	1/1:23,0:23:18.06:230,18,0	0/1:19,0:18:35.98:36,0,306	1/1:23,0:23:11.93:110,12,0	0/0:29,0:29:75.19:0,75,3390	0/0:20,0:20:51.16:0,51,2763	0/0:25,0:25:9.03:0,9,131	1/1:27,0:27:27.06:320,27,0	1/1:31,0:31:20.71:235,21,0	0/1:25,0:25:99:136,0,560	0/1:23,0:23:99:146,0,772	0/0:19,0:18:22.53:0,23,671	0/0:37,0:37:69.66:0,70,2948	0/0:9,0:9:17.54:0,18,757	0/0:19,0:19:16.25:0,16,2105	0/0:17,0:17:42.09:0,42,1949	0/0:14,0:13:32.85:0,33,1361	1/1:26,0:26:12.04:159,12,0	0/1:25,0:25:83.07:297,0,83	0/0:34,0:34:76.19:0,76,3250	0/1:9,0:7:18.88:31,0,19
chr10	52870679	.	AGATAGATAGATT	A	6384.16	PASS	AB=0.890;AC=30;AF=0.536;AN=56;BaseQRankSum=-1.034;DP=661;FS=5.248;HRun=0;HaplotypeScore=235.6840;InbreedingCoeff=0.6330;MQ=56.45;MQ0=13;MQRankSum=-4.889;QD=15.61;ReadPosRankSum=2.250;VQSLOD=3.3764;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:10,22:32:12.51:382,13,0	1/1:1,9:10:9.03:323,9,0	0/0:32,0:14:15.01:0,15,220	0/0:27,0:13:13.98:0,14,110	1/1:2,34:36:27.56:456,28,0	1/1:23,0:23:6.02:176,6,0	1/1:14,0:14:2.74:12,3,0	0/1:39,0:38:99:195,0,399	1/1:5,16:21:18.06:646,18,0	1/1:20,0:19:22.55:235,23,0	1/1:4,20:24:11.97:322,12,0	0/0:29,0:29:75.17:0,75,2623	0/0:20,0:20:51.15:0,51,2099	1/1:23,0:23:6.60:25,7,0	1/1:3,25:28:27.09:956,27,0	1/1:7,23:30:21.07:730,21,0	0/1:26,0:26:99:185,0,286	0/1:24,0:25:99:206,0,469	0/0:17,0:16:23.15:0,23,475	0/0:33,0:33:69.61:0,70,2061	0/0:9,0:9:17.52:0,18,534	0/0:18,0:18:16.24:0,16,1523	0/0:17,0:17:42.08:0,42,1505	0/0:13,0:12:32.94:0,33,1074	1/1:4,20:24:12.04:431,12,0	1/1:4,21:25:54.53:1002,55,0	0/0:37,0:37:35.65:0,36,2240	0/1:3,6:7:18.83:102,0,19
chr10	52870683	.	AGATAGATT	A	5136.72	PASS	AB=1.000;AC=31;AF=0.554;AN=56;BaseQRankSum=4.037;DP=643;FS=7.562;HRun=0;HaplotypeScore=200.0603;InbreedingCoeff=0.6860;MQ=56.15;MQ0=12;MQRankSum=-4.993;QD=12.87;ReadPosRankSum=0.028;VQSLOD=3.0064;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:30:11.99:200,12,0	1/1:9,0:9:9.03:184,9,0	0/0:29,0:10:15.01:0,15,174	0/0:26,0:11:16.19:0,16,134	1/1:34,0:34:26.60:227,27,0	1/1:23,0:23:6.02:120,6,0	1/1:13,0:13:1.82:5,2,0	0/1:43,0:42:99:360,0,153	1/1:21,0:21:18.06:368,18,0	1/1:2,17:18:48.03:784,48,0	1/1:24,0:24:11.97:183,12,0	0/0:28,0:28:78.16:0,78,1971	0/0:19,0:19:51.14:0,51,1488	1/1:1,20:21:9.03:236,9,0	1/1:28,0:28:27.09:538,27,0	1/1:26,0:26:20.84:405,21,0	0/1:26,0:26:76.61:247,0,77	0/1:25,0:25:99:261,0,213	0/0:15,0:15:20.05:0,20,279	0/0:32,0:32:59.39:0,59,1228	0/0:9,0:9:17.49:0,17,328	0/0:18,0:18:16.22:0,16,1015	0/0:18,0:18:48.07:0,48,1183	0/0:13,0:12:32.96:0,33,850	1/1:23,0:23:12.04:246,12,0	1/1:24,1:25:57.61:694,58,0	0/0:37,0:37:8.94:0,9,1303	1/1:9,0:7:5.97:80,6,0
chr10	52870686	.	TA	T	128.23	PASS	AB=0.961;AC=14;AF=0.250;AN=56;BaseQRankSum=9.344;DP=622;FS=4.941;HRun=1;HaplotypeScore=156.3473;InbreedingCoeff=0.0753;MQ=54.40;MQ0=11;MQRankSum=-7.448;QD=0.56;ReadPosRankSum=6.324;VQSLOD=-0.6331;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:28:0.96:1,0,85	1/1:9,0:9:5.45:15,5,0	0/0:25,1:8:24.05:0,24,328	0/0:24,1:10:18.94:0,19,257	0/0:34,0:34:22.78:0,23,326	1/1:21,0:21:4.07:11,4,0	0/1:13,0:13:0:0,0,0	0/0:44,0:43:99:0,129,1741	0/1:17,0:17:16.28:16,0,34	0/0:19,0:18:18.22:0,18,375	0/0:24,0:24:9.88:0,10,141	0/0:28,0:28:84.27:0,84,1303	0/0:18,0:18:54.18:0,54,859	0/0:21,0:21:0.60:0,1,22	0/1:26,0:26:20.87:21,0,37	0/1:24,0:24:9.11:9,0,21	0/0:26,0:26:60.20:0,60,917	0/0:23,0:23:67.05:0,67,960	0/1:15,0:15:7.31:7,0,255	0/0:32,1:33:19.75:0,20,486	0/1:7,3:10:60.43:60,0,99	0/0:18,0:18:43.68:0,44,791	0/0:16,0:16:48.16:0,48,758	0/0:13,0:12:33.11:0,33,523	0/1:23,0:23:7.15:7,0,59	0/0:23,0:23:20.51:0,21,497	0/1:29,7:37:99:115,0,527	0/1:8,0:7:0.31:0,0,38
chr10	52870689	.	AT	A	2389.46	PASS	AB=0.977;AC=27;AF=0.482;AN=56;BaseQRankSum=6.627;DP=606;FS=1.770;HRun=2;HaplotypeScore=145.4273;InbreedingCoeff=0.6324;MQ=52.50;MQ0=11;MQRankSum=-3.176;QD=6.95;ReadPosRankSum=6.378;VQSLOD=0.9143;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:25:7.51:8,0,19	1/1:9,0:9:6.66:21,7,0	0/0:24,0:7:18.06:0,18,267	0/0:22,0:7:18.06:0,18,253	0/0:34,0:34:21.29:0,21,202	1/1:20,0:20:4.44:14,4,0	0/1:12,0:13:0:0,0,0	0/1:40,2:41:99:130,0,530	1/1:17,0:17:13.14:40,13,0	0/0:19,0:18:4.54:0,5,175	0/1:21,0:21:1.88:2,0,29	0/0:27,0:27:81.27:0,81,1210	0/0:17,0:17:51.17:0,51,762	1/1:20,0:20:3.42:11,3,0	1/1:25,0:25:12.54:47,13,0	1/1:23,0:23:3.81:23,4,0	0/0:26,0:26:56.80:0,57,476	0/0:23,0:23:68.73:0,69,542	1/1:6,9:15:42.04:462,42,0	1/1:18,16:34:65.70:796,66,0	1/1:6,4:10:9.88:166,10,0	0/0:19,0:19:53.71:0,54,621	0/0:16,0:16:48.16:0,48,715	0/0:13,0:12:33.03:0,33,492	1/1:21,0:22:8.88:27,9,0	0/0:22,0:22:11.03:0,11,252	1/1:23,17:40:27.29:835,27,0	0/1:8,0:7:1.70:2,0,20
chr10	52870690	.	T	TGA	1646.55	PASS	AB=0.800;AC=6;AF=0.111;AN=54;BaseQRankSum=-1.365;DP=606;FS=1.125;HRun=0;HaplotypeScore=158.5845;InbreedingCoeff=0.2908;MQ=52.50;MQ0=11;MQRankSum=3.079;QD=15.39;ReadPosRankSum=3.809;VQSLOD=3.4846;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:12.08:0,12,93	0/0:9,0:9:8.52:0,9,42	0/0:24,0:7:18.06:0,18,288	0/0:22,0:7:18.06:0,18,273	0/0:34,0:34:26.94:0,27,364	0/0:20,0:20:5.68:0,6,28	./.	0/0:43,0:42:91.53:0,92,1280	0/0:16,0:16:17.08:0,17,86	0/0:19,0:18:47.24:0,47,508	0/0:20,0:20:11.78:0,12,107	0/0:27,0:27:81.28:0,81,1316	0/0:17,0:17:51.17:0,51,830	0/0:20,0:20:8.67:0,9,52	0/0:25,0:25:25.73:0,26,142	0/0:23,0:23:20.20:0,20,124	0/0:26,0:26:57.14:0,57,847	0/0:23,0:23:69.21:0,69,951	0/1:9,5:14:0.39:278,0,0	0/1:18,16:34:8.06:674,0,8	1/1:7,3:10:1.58:148,2,0	0/0:19,0:19:50.21:0,50,560	0/0:17,0:17:48.16:0,48,771	0/0:13,0:12:33.11:0,33,527	0/0:21,0:21:11.36:0,11,57	0/0:22,0:22:56.63:0,57,629	0/1:29,11:40:25.53:656,0,26	0/1:9,0:8:0.23:0,0,51
chr10	52870691	.	T	TA	969.76	PASS	AB=0.746;AC=4;AF=0.074;AN=54;BaseQRankSum=1.487;DP=611;FS=2.577;HRun=0;HaplotypeScore=153.5498;InbreedingCoeff=-0.0452;MQ=52.57;MQ0=11;MQRankSum=6.070;QD=9.80;ReadPosRankSum=3.587;VQSLOD=3.8387;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:10.33:0,10,44	0/0:9,0:9:6.11:0,6,19	0/0:23,0:7:18.06:0,18,252	0/0:22,0:7:18.06:0,18,238	0/0:34,0:34:26.40:0,26,177	0/0:21,0:21:4.44:0,4,13	./.	0/0:43,0:42:94.94:0,95,662	0/0:17,0:17:12.59:0,13,40	0/0:19,0:18:41.26:0,41,187	0/0:20,0:20:10.48:0,10,56	0/0:27,0:27:81.27:0,81,1131	0/0:17,0:17:51.17:0,51,710	0/0:20,0:20:7.28:0,7,27	0/0:25,0:25:19.42:0,19,70	0/0:23,0:23:16.03:0,16,66	0/0:26,0:26:55.44:0,55,340	0/0:24,0:24:66.09:0,66,378	0/1:10,5:15:50.70:132,0,51	0/1:18,16:34:32.73:439,0,33	0/1:7,3:10:9.32:83,0,9	0/0:8,0:18:29.48:0,29,368	0/0:17,0:17:51.12:0,51,660	0/0:13,0:12:33.10:0,33,443	0/0:21,0:21:8.15:0,8,26	0/0:23,0:23:45.56:0,46,230	0/1:29,11:40:22.45:423,0,22	0/0:9,0:8:7.60:0,8,36
chr10	52872180	.	A	AACAC	2540.02	PASS	AB=1.000;AC=37;AF=0.740;AN=50;BaseQRankSum=-0.808;DP=577;FS=4.142;HRun=0;HaplotypeScore=119.7287;InbreedingCoeff=0.4681;MQ=75.00;MQ0=12;MQRankSum=-0.597;QD=6.48;ReadPosRankSum=-2.587;VQSLOD=2.1641;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:27:14.88:251,15,0	1/1:7,0:7:8.97:110,9,0	./.	./.	1/1:26,0:26:12.04:223,12,0	1/1:12,0:12:3.01:68,3,0	1/1:24,0:23:8.99:144,9,0	0/1:19,0:19:0:0,0,0	1/1:25,0:25:6.02:109,6,0	1/1:29,0:29:31.57:545,32,0	0/1:19,0:19:0:0,0,0	0/1:18,0:18:0:0,0,0	0/0:14,0:14:2.45:0,2,27	1/1:20,0:20:9.01:153,9,0	1/1:20,0:20:12.03:227,12,0	1/1:18,3:22:3.01:70,3,0	0/0:17,0:20:2.05:0,2,27	0/0:15,0:15:6.01:0,6,56	1/1:12,0:10:2.99:24,3,0	1/1:15,0:15:12.01:131,12,0	1/1:31,0:32:2.74:12,3,0	0/0:18,0:18:3.48:0,3,46	./.	0/0:29,0:28:3:0,3,46	1/1:16,4:20:3:70,3,0	1/1:20,0:20:15.99:279,16,0	1/1:11,0:14:2.74:12,3,0	1/1:5,0:5:12.04:239,12,0
chr10	52873387	.	TCACACACATACACACATACGCA	T	6991.10	PASS	AB=1.000;AC=35;AF=0.625;AN=56;BaseQRankSum=5.949;DP=581;FS=9.248;HRun=0;HaplotypeScore=280.9229;InbreedingCoeff=0.7983;MQ=77.96;MQ0=3;MQRankSum=-5.814;QD=24.02;ReadPosRankSum=2.439;VQSLOD=1.9868;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:24:32.64:648,33,0	1/1:3,0:3:6:97,6,0	0/0:45,0:31:45.74:0,46,1447	0/0:53,0:43:92.79:0,93,2217	1/1:3,14:17:6.02:241,6,0	1/1:2,18:20:9.03:532,9,0	1/1:21,0:21:42.10:782,42,0	1/1:17,0:16:38.98:546,39,0	1/1:9,0:10:12:248,12,0	1/1:15,0:15:26.67:507,27,0	1/1:3,14:17:5.93:159,6,0	0/0:29,0:29:78.12:0,78,4260	0/0:23,0:23:60.19:0,60,2689	1/1:2,1:20:12.04:570,12,0	1/1:3,0:24:8.76:319,9,0	1/1:0,0:18:12.04:470,12,0	0/0:26,0:26:60.07:0,60,3048	0/0:14,0:14:26.96:0,27,1035	0/1:14,0:14:43.15:199,0,43	0/0:12,0:12:2.22:0,2,7	1/1:16,0:15:8.98:138,9,0	0/0:27,0:27:63.17:0,63,2314	0/0:14,0:14:39.13:0,39,1913	0/0:47,0:47:99:0,114,7897	1/1:17,0:17:39.07:721,39,0	1/1:14,0:14:30.05:531,30,0	1/1:20,0:20:9.02:92,9,0	1/1:3,0:3:9.03:190,9,0
chr10	52873393	.	ACATACACACATACG	A	6771.98	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=6.064;DP=548;FS=15.858;HRun=0;HaplotypeScore=191.4644;InbreedingCoeff=0.8702;MQ=72.10;MQ0=6;MQRankSum=-4.208;QD=24.45;ReadPosRankSum=1.919;VQSLOD=3.0011;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:19:32.43:668,32,0	1/1:2,0:2:6:97,6,0	0/0:43,0:29:45.74:0,46,1447	0/0:46,0:36:92.79:0,93,2172	1/1:15,0:15:6.02:93,6,0	1/1:19,0:19:9.03:310,9,0	1/1:19,0:19:42.10:782,42,0	1/1:17,0:14:38.98:546,39,0	1/1:10,0:10:12:192,12,0	1/1:13,0:13:26.49:507,26,0	1/1:16,0:16:5.93:85,6,0	0/0:30,0:30:81.13:0,81,3126	0/0:22,0:22:60.19:0,60,1933	1/1:19,0:19:12.04:368,12,0	1/1:22,0:21:9.03:272,9,0	1/1:18,0:18:12.04:407,12,0	0/0:25,0:25:61.30:0,61,1944	0/0:13,0:13:29.97:0,30,817	1/1:9,0:9:23.95:395,24,0	1/1:13,0:13:3.01:84,3,0	1/1:14,0:13:8.98:138,9,0	0/0:25,0:25:66.18:0,66,1921	0/0:16,0:16:42.14:0,42,1472	0/0:51,0:51:99:0,126,5938	1/1:17,0:17:39.07:721,39,0	1/1:11,0:11:30.05:531,30,0	1/1:2,18:20:10.28:385,10,0	1/1:3,0:3:9.03:190,9,0
chr10	52873394	.	CAT	C	1934.27	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=11.258;DP=540;FS=10.383;HRun=0;HaplotypeScore=113.7441;InbreedingCoeff=0.8370;MQ=70.71;MQ0=6;MQRankSum=-3.815;QD=7.14;ReadPosRankSum=1.383;VQSLOD=2.9350;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:18:32.26:250,32,0	1/1:2,0:2:5.99:48,6,0	0/0:41,0:27:74.21:0,74,1239	0/0:46,0:36:99:0,108,1828	1/1:15,0:15:2.90:16,3,0	1/1:19,0:19:8.73:49,9,0	1/1:19,0:19:30.53:245,31,0	1/1:16,0:13:32.66:231,33,0	1/1:10,0:10:11.10:70,11,0	1/1:0,13:13:26.19:208,26,0	1/1:14,0:14:5.80:32,6,0	0/0:30,0:30:71.58:0,72,1377	0/0:23,0:23:61.73:0,62,1081	1/1:18,0:18:11.69:68,12,0	1/1:22,0:21:8.75:50,9,0	1/1:18,0:18:11.66:67,12,0	0/0:25,0:25:60.53:0,61,862	0/0:12,0:12:14.18:0,14,421	1/1:9,0:9:5.98:104,6,0	1/1:13,0:13:2.96:22,3,0	1/1:13,0:12:8.94:66,9,0	0/0:25,0:25:66.12:0,66,1124	0/0:16,0:16:42.10:0,42,747	0/0:50,1:51:57.34:0,57,2070	1/1:17,0:17:35.43:273,35,0	1/1:1,10:11:29.74:223,30,0	1/1:20,0:20:8.84:56,9,0	1/1:3,0:3:8.92:64,9,0
chr10	52873395	.	ATACACACATACG	A	6470.13	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=5.974;DP=531;FS=13.391;HRun=0;HaplotypeScore=169.0096;InbreedingCoeff=0.8701;MQ=70.85;MQ0=8;MQRankSum=-5.909;QD=24.70;ReadPosRankSum=1.613;VQSLOD=3.0162;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:16:32.28:667,32,0	1/1:2,0:2:6:97,6,0	0/0:41,0:27:45.74:0,46,1447	0/0:46,0:36:92.79:0,93,2171	1/1:14,0:14:5.97:70,6,0	1/1:18,0:18:9.03:268,9,0	1/1:18,0:18:42.10:782,42,0	1/1:16,0:13:38.98:546,39,0	1/1:8,0:8:12:178,12,0	1/1:13,0:13:26.37:506,26,0	1/1:14,0:14:5.93:72,6,0	0/0:30,0:30:81.07:0,81,2850	0/0:23,0:23:63.20:0,63,1854	1/1:18,0:18:12.04:313,12,0	1/1:23,0:21:9.03:234,9,0	1/1:18,0:18:12.04:351,12,0	0/0:25,0:25:60.79:0,61,1771	0/0:12,0:12:29.97:0,30,733	1/1:9,0:9:23.95:395,24,0	1/1:0,13:13:3.01:118,3,0	1/1:13,0:12:8.98:138,9,0	0/0:25,0:25:66.18:0,66,1796	0/0:17,0:16:42.14:0,42,1371	0/0:50,0:50:99:0,126,5304	1/1:17,0:17:39.07:721,39,0	1/1:10,0:10:30.05:531,30,0	1/1:18,0:18:10.28:291,10,0	1/1:3,0:3:9.03:190,9,0
chr10	52873407	.	GCA	G	214.32	PASS	AB=0.959;AC=22;AF=0.440;AN=50;BaseQRankSum=5.850;DP=542;FS=6.013;HRun=0;HaplotypeScore=117.7910;InbreedingCoeff=0.0355;MQ=55.41;MQ0=16;MQRankSum=-3.810;QD=0.62;ReadPosRankSum=3.656;VQSLOD=1.8318;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:26:17.93:0,18,171	./.	./.	./.	1/1:15,0:15:2.84:14,3,0	1/1:18,0:18:8.28:38,8,0	0/0:18,0:16:2.99:0,3,35	0/0:16,0:12:5.98:0,6,26	1/1:7,0:7:2.84:14,3,0	0/0:13,0:13:3.89:0,4,29	0/1:15,0:14:0:0,0,0	0/1:26,2:29:13.87:14,0,311	0/1:19,3:22:73.62:82,0,74	1/1:20,0:20:6.17:21,6,0	0/1:29,0:27:15.60:16,0,16	0/1:24,0:24:12.30:29,0,12	0/0:23,0:25:13.69:0,14,126	0/0:9,0:11:12.28:0,12,71	0/0:10,0:9:2.98:0,3,21	1/1:16,0:15:1.76:6,2,0	0/1:14,0:13:0:0,0,0	0/1:18,1:19:20.28:20,0,121	0/1:16,3:18:11.30:11,0,200	0/1:47,3:52:74.77:75,0,623	0/1:15,0:15:0:0,0,0	0/0:10,0:10:3.02:0,3,6	0/1:24,0:23:8.01:8,0,85	0/1:5,0:4:0:0,0,0
chr10	52873637	.	AG	A	10634.55	PASS	AC=36;AF=0.667;AN=54;BaseQRankSum=8.758;DP=587;FS=1.150;HRun=7;HaplotypeScore=74.1588;InbreedingCoeff=0.9987;MQ=92.04;MQ0=0;MQRankSum=-4.292;QD=25.81;ReadPosRankSum=2.282;VQSLOD=5.5233;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,35:37:96.22:979,96,0	1/1:0,8:8:24.05:245,24,0	0/0:26,0:26:65.97:0,66,757	0/0:25,0:25:43.81:0,44,504	1/1:2,28:30:78.17:796,78,0	1/1:0,27:27:69.16:704,69,0	1/1:1,20:21:42.10:429,42,0	1/1:4,17:21:51.11:517,51,0	1/1:2,8:10:24.05:244,24,0	1/1:2,17:19:51.12:520,51,0	1/1:1,22:23:60.14:611,60,0	0/0:28,0:28:78.25:0,78,981	0/0:24,0:24:63.20:0,63,791	1/1:0,28:28:84.19:857,84,0	1/1:2,30:32:87.20:888,87,0	1/1:5,24:29:54.12:551,54,0	0/0:11,0:11:27.04:0,27,321	0/0:13,0:13:30.08:0,30,363	1/1:3,16:19:48.11:490,48,0	1/1:1,23:24:66.15:671,66,0	1/1:5,12:17:24.05:245,24,0	0/0:18,0:18:51.16:0,51,641	0/0:15,0:15:39.11:0,39,478	0/0:15,0:15:39.12:0,39,491	1/1:3,15:18:45.10:459,45,0	1/1:2,24:26:72.15:728,72,0	1/1:0,23:23:69.15:701,69,0	./.
chr10	52874977	.	A	AAC	434.35	PASS	AB=0.925;AC=19;AF=0.413;AN=46;BaseQRankSum=-1.617;DP=547;FS=1.385;HRun=0;HaplotypeScore=86.0549;InbreedingCoeff=-0.2090;MQ=69.90;MQ0=11;MQRankSum=-0.861;QD=1.47;ReadPosRankSum=-0.926;VQSLOD=1.7208;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:26,2:27:15.56:38,0,16	0/0:9,0:9:2.84:0,3,14	./.	./.	./.	0/0:14,0:14:3.48:0,3,33	0/0:27,0:28:3.31:0,3,15	./.	1/1:19,0:19:5.96:43,6,0	0/1:29,0:28:17.05:20,0,17	0/0:13,0:13:2.88:0,3,23	0/0:13,0:13:11.95:0,12,93	0/0:18,0:18:5.67:0,6,53	0/1:18,0:18:25.82:52,0,26	0/1:21,8:29:25.97:38,0,26	0/1:21,9:30:51.94:76,0,52	0/0:17,0:19:18.25:0,18,150	0/1:18,0:18:9.73:10,0,52	1/1:12,0:11:2.88:15,3,0	0/1:10,6:16:34.97:35,0,55	0/1:28,0:27:8.25:77,0,8	./.	0/0:9,0:9:3:0,3,32	0/1:18,0:18:15.61:16,0,84	0/1:11,0:11:6.09:6,0,47	1/1:12,0:11:3:26,3,0	0/1:21,0:25:43.08:94,0,43	1/1:2,0:2:3:26,3,0
chr10	52875343	.	CAAA	C	15451.16	PASS	AB=0.938;AC=43;AF=0.768;AN=56;BaseQRankSum=6.590;DP=626;FS=1.307;HRun=9;HaplotypeScore=98.9753;InbreedingCoeff=0.9030;MQ=78.66;MQ0=0;MQRankSum=-1.716;QD=30.42;ReadPosRankSum=4.043;VQSLOD=3.7937;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,29:30:69.23:962,69,0	1/1:2,11:13:27.08:382,27,0	0/0:25,0:28:44.07:0,44,786	0/1:14,0:13:2.99:3,0,227	1/1:0,23:23:48.06:641,48,0	1/1:0,25:25:57.18:801,57,0	1/1:0,23:23:45.15:624,45,0	1/1:4,24:28:69.16:898,69,0	1/1:2,20:22:54.17:760,54,0	1/1:3,21:24:63.18:857,63,0	1/1:1,16:17:38.87:459,39,0	0/0:18,0:18:48.14:0,48,948	0/0:20,0:20:60.20:0,60,1238	1/1:3,25:28:57.18:807,57,0	1/1:2,31:33:69.22:962,69,0	1/1:1,29:30:78.26:1100,78,0	1/1:2,27:29:63.20:894,63,0	1/1:1,18:19:39.13:546,39,0	1/1:2,10:12:30.09:403,30,0	1/1:3,19:22:48.12:634,48,0	1/1:1,24:25:60.13:819,60,0	0/0:15,0:15:36.56:0,37,642	0/0:20,0:20:48.13:0,48,903	0/0:17,0:17:48.15:0,48,977	1/1:2,27:28:63.20:879,63,0	1/1:1,23:23:63.20:878,63,0	1/1:2,33:35:78.14:1098,78,0	1/1:0,2:2:3.01:43,3,0
chr10	52879391	.	AT	A	129.29	PASS	AC=6;AF=0.130;AN=46;BaseQRankSum=3.875;DP=134;FS=8.649;HRun=4;HaplotypeScore=18.0350;InbreedingCoeff=0.4390;MQ=78.15;MQ0=1;MQRankSum=0.913;QD=14.37;ReadPosRankSum=-1.361;VQSLOD=0.9687;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:3,0:3:9.03:0,9,126	0/0:1,0:1:3.01:0,3,42	0/0:2,0:2:3.01:0,3,42	0/0:7,0:6:6.74:0,7,63	0/0:2,0:2:6.02:0,6,84	0/0:5,0:5:12.04:0,12,168	./.	0/0:45,0:45:99:0,123,1670	./.	0/0:4,0:4:12.04:0,12,168	0/0:2,0:2:6.02:0,6,84	0/0:1,0:1:3.01:0,3,42	0/0:1,0:1:3.01:0,3,42	0/0:2,0:2:6.02:0,6,84	./.	0/0:2,0:2:6.02:0,6,84	0/0:23,0:23:66.18:0,66,885	0/0:4,0:4:12.04:0,12,167	1/1:2,3:5:9.02:98,9,0	./.	1/1:0,1:1:3.01:36,3,0	0/0:1,0:1:3.01:0,3,42	./.	0/0:2,0:2:6.02:0,6,84	0/0:6,0:6:18.06:0,18,250	0/0:1,0:1:3.01:0,3,42	1/1:0,3:3:9.03:108,9,0	0/0:10,0:10:30.10:0,30,420
chr10	52880089	.	T	TG	680.57	PASS	AB=0.545;AC=3;AF=0.054;AN=56;BaseQRankSum=1.071;DP=565;FS=3.336;HRun=0;HaplotypeScore=104.4838;InbreedingCoeff=0.6412;MQ=77.19;MQ0=0;MQRankSum=-1.600;QD=22.69;ReadPosRankSum=0.886;VQSLOD=4.6179;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:23.47:0,23,221	0/0:7,0:7:17.69:0,18,152	0/0:24,0:21:18.58:0,19,492	0/0:32,0:27:47.59:0,48,712	0/0:40,0:40:99:0,102,600	0/0:32,0:32:84.96:0,85,488	0/0:19,0:19:46.70:0,47,278	0/0:29,0:29:85.51:0,86,628	0/0:10,0:10:15.04:0,15,167	0/0:29,0:29:83.48:0,83,600	0/0:25,0:25:60.35:0,60,453	0/0:18,0:18:54.14:0,54,703	0/0:22,0:22:63.20:0,63,865	0/0:23,0:23:64.71:0,65,452	0/0:21,0:21:57.86:0,58,439	0/0:18,0:18:47.34:0,47,387	1/1:3,15:18:44.55:489,45,0	0/1:2,10:12:9.92:298,0,10	0/0:24,0:24:57.47:0,57,364	0/0:15,0:15:33.73:0,34,208	0/0:8,0:8:16.27:0,16,115	0/0:18,0:18:54.17:0,54,732	0/0:15,0:15:45.15:0,45,629	0/0:21,0:21:60.66:0,61,824	0/0:26,0:26:72:0,72,474	0/0:16,0:16:46.81:0,47,345	0/0:22,0:22:53.08:0,53,364	0/0:3,0:3:8.75:0,9,51
chr10	52880090	.	T	TA	12043.09	PASS	AB=0.583;AC=41;AF=0.732;AN=56;BaseQRankSum=-8.454;DP=569;FS=7.133;HRun=8;HaplotypeScore=69.7863;InbreedingCoeff=0.8854;MQ=75.88;MQ0=0;MQRankSum=-1.294;QD=28.34;ReadPosRankSum=0.352;VQSLOD=5.0707;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,17:19:45.13:513,45,0	0/1:2,5:7:12.41:123,0,12	0/0:24,0:21:40.74:0,41,335	0/0:31,0:26:15.87:0,16,227	1/1:2,38:40:99:1208,108,0	1/1:1,32:33:90.27:1039,90,0	1/1:2,19:21:44.58:548,45,0	1/1:4,24:28:72.21:830,72,0	1/1:1,8:10:27.08:311,27,0	1/1:3,28:31:87.19:951,87,0	1/1:4,20:25:63.18:718,63,0	0/0:15,0:15:45.02:0,45,412	0/0:21,0:21:57.01:0,57,517	1/1:3,19:22:57.15:647,57,0	1/1:4,17:21:48.14:554,48,0	1/1:5,14:19:36.11:416,36,0	1/1:19,0:19:37.06:508,37,0	1/1:12,0:12:5.64:319,6,0	1/1:5,17:22:60.18:687,60,0	1/1:4,12:15:39.11:446,39,0	1/1:2,6:8:14.97:147,15,0	0/0:18,0:18:42:0,42,384	0/0:15,0:15:45.02:0,45,411	0/0:20,0:20:25.65:0,26,487	1/1:3,25:28:72.21:831,72,0	1/1:2,14:16:17.68:457,18,0	1/1:10,13:23:57.16:643,57,0	1/1:2,3:5:14.97:144,15,0
chr10	52880106	.	AAAAAC	A	1841.40	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=5.529;DP=598;FS=4.727;HRun=0;HaplotypeScore=148.5865;InbreedingCoeff=0.9372;MQ=65.91;MQ0=1;MQRankSum=-4.189;QD=27.90;ReadPosRankSum=-1.227;VQSLOD=2.8079;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:39.13:0,39,909	0/0:6,0:6:12.04:0,12,303	0/0:25,0:18:14.48:0,14,329	0/0:28,0:19:10.92:0,11,440	0/0:44,0:44:99:0,108,2938	0/0:35,0:35:81.27:0,81,2171	0/0:24,0:24:45.15:0,45,1129	0/0:38,0:38:75.24:0,75,1568	0/0:12,0:12:27.09:0,27,630	0/0:27,0:27:48.16:0,48,1283	0/0:26,0:26:66.21:0,66,1763	0/0:21,0:21:57.19:0,57,1414	0/0:24,0:24:57.19:0,57,1398	0/0:21,0:21:54.17:0,54,1344	0/0:21,0:21:39.13:0,39,909	0/0:17,0:17:36.12:0,36,1018	0/0:17,0:17:33.11:0,33,837	0/0:13,0:13:30.10:0,30,764	1/1:10,14:24:45.15:741,45,0	1/1:9,6:14:33.08:520,33,0	1/1:6,1:7:6.02:93,6,0	0/0:19,0:19:48.16:0,48,1257	0/0:22,0:22:54.18:0,54,1362	0/0:23,0:23:54.18:0,54,1445	0/0:30,0:30:75.25:0,75,2010	0/0:15,0:15:39.13:0,39,984	1/1:12,8:20:36.12:641,36,0	0/0:4,0:4:12.04:0,12,348
chr10	52880111	.	C	CA	1056.70	PASS	AB=0.824;AC=4;AF=0.071;AN=56;BaseQRankSum=6.488;DP=593;FS=1.245;HRun=5;HaplotypeScore=96.6711;InbreedingCoeff=-0.0625;MQ=66.58;MQ0=1;MQRankSum=-4.083;QD=17.61;ReadPosRankSum=-0.204;VQSLOD=3.0867;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:48.10:0,48,527	0/0:7,0:7:18.05:0,18,203	0/0:26,0:19:26.46:0,26,318	0/0:32,0:23:35.46:0,35,409	0/0:40,0:40:99:0,108,1225	0/0:36,0:36:96.25:0,96,1072	0/0:21,0:21:55.72:0,56,582	0/0:41,0:41:99:0,111,1253	0/0:12,0:12:33.09:0,33,372	0/0:24,0:24:60.17:0,60,678	0/0:26,0:26:72.20:0,72,814	0/0:21,0:21:60.17:0,60,680	0/0:24,0:24:69.20:0,69,781	0/0:19,0:19:54.15:0,54,611	0/0:23,0:23:60.12:0,60,655	0/0:19,0:19:48.13:0,48,542	0/0:18,0:18:25.38:0,25,497	0/0:13,0:13:36.07:0,36,404	0/1:19,1:20:15.36:491,0,15	0/1:10,3:12:33.07:271,0,33	0/1:6,2:8:69.95:70,0,75	0/0:19,0:19:57.16:0,57,645	0/0:21,0:21:57.16:0,57,646	0/0:21,0:21:60.17:0,60,681	0/0:29,0:29:81.23:0,81,916	0/0:16,0:16:45.13:0,45,508	0/1:12,7:19:25.02:335,0,25	0/0:4,0:4:12.03:0,12,136
chr10	52880676	.	AC	A	4813.07	PASS	AC=28;AF=0.519;AN=54;BaseQRankSum=20.378;DP=612;FS=3.961;HRun=2;HaplotypeScore=171.9063;InbreedingCoeff=0.9991;MQ=85.68;MQ0=0;MQRankSum=-18.112;QD=15.33;ReadPosRankSum=1.316;VQSLOD=4.8974;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,18:25:60.46:326,60,0	1/1:1,7:8:20.20:110,20,0	0/0:28,0:28:81.03:0,81,1078	0/0:24,0:24:36.56:0,37,674	1/1:3,21:24:56.24:285,56,0	1/1:2,18:20:50.01:309,50,0	1/1:2,9:11:27.80:143,28,0	1/1:5,25:30:82.66:592,83,0	1/1:1,14:15:40.59:233,41,0	1/1:2,21:23:65.59:442,66,0	1/1:3,17:20:41.55:229,42,0	0/0:25,0:25:75.24:0,75,1085	0/0:21,0:21:63.17:0,63,887	1/1:2,20:22:60.32:320,60,0	1/1:7,31:38:99:618,109,0	1/1:5,21:26:65.29:361,65,0	0/0:33,0:33:87.29:0,87,1287	0/0:10,0:10:30.10:0,30,444	0/0:17,0:17:45.15:0,45,665	0/0:20,0:20:60.19:0,60,867	0/0:24,0:24:69.10:0,69,932	0/0:15,0:15:45.14:0,45,645	0/0:19,0:19:57.16:0,57,800	0/0:24,0:24:66.22:0,66,973	1/1:5,21:26:66.08:380,66,0	1/1:5,21:26:69:465,69,0	0/0:38,0:37:99:0,114,1638	./.
chr10	52880679	.	T	TGA	11720.40	PASS	AC=28;AF=0.519;AN=54;BaseQRankSum=20.145;DP=600;FS=5.528;HRun=0;HaplotypeScore=165.4424;InbreedingCoeff=0.9996;MQ=84.27;MQ0=0;MQRankSum=-18.543;QD=37.45;ReadPosRankSum=-0.290;VQSLOD=5.6181;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,18:24:69.12:857,69,0	1/1:1,7:8:24.08:309,24,0	0/0:28,0:28:78.26:0,78,1208	0/0:21,0:21:53.29:0,53,880	1/1:2,21:23:67.72:816,68,0	1/1:1,19:20:59.57:735,60,0	1/1:2,9:11:32.84:397,33,0	1/1:7,25:32:93.06:1261,93,0	1/1:0,14:14:42.13:545,42,0	1/1:4,21:25:75.22:1032,75,0	1/1:3,17:20:56.87:683,57,0	0/0:25,0:25:75.24:0,75,1198	0/0:24,0:24:66.22:0,66,1074	1/1:1,21:22:63.20:795,63,0	1/1:5,34:39:99:1468,112,0	1/1:4,21:25:74.64:914,75,0	0/0:31,0:31:87.30:0,87,1419	0/0:10,0:10:30.10:0,30,489	0/0:16,0:16:48.16:0,48,782	0/0:20,0:20:60.17:0,60,950	0/0:22,0:22:63.21:0,63,1027	0/0:15,0:15:45.15:0,45,734	0/0:17,0:17:51.17:0,51,831	0/0:21,0:21:63.19:0,63,1000	1/1:2,21:23:68.79:842,69,0	1/1:6,21:27:80.99:1065,81,0	0/0:37,0:36:99:0,111,1773	./.
chr10	52880685	.	G	GA	12369.11	PASS	AC=28;AF=0.519;AN=54;BaseQRankSum=17.187;DP=626;FS=5.040;HRun=2;HaplotypeScore=149.9105;InbreedingCoeff=0.9992;MQ=84.46;MQ0=0;MQRankSum=-18.091;QD=37.71;ReadPosRankSum=1.257;VQSLOD=4.0189;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,23:25:63.21:897,63,0	1/1:1,9:10:21.04:277,21,0	0/0:32,0:32:78.15:0,78,914	0/0:21,0:21:54.08:0,54,598	1/1:2,23:25:63.21:890,63,0	1/1:2,21:23:57.18:796,57,0	1/1:2,10:12:27.09:386,27,0	1/1:5,30:35:87.29:1244,87,0	1/1:2,14:16:42.14:600,42,0	1/1:2,23:25:72.02:979,72,0	1/1:3,18:22:54.14:737,54,0	0/0:26,0:26:75.24:0,75,930	0/0:24,0:24:72.23:0,72,893	1/1:0,23:23:69.23:984,69,0	1/1:2,35:37:99:1540,111,0	1/1:0,25:25:72.24:1027,72,0	0/0:34,0:34:84.26:0,84,1039	0/0:12,0:12:36.11:0,36,445	0/0:18,0:18:51.15:0,51,622	0/0:18,0:18:54.17:0,54,669	0/0:25,0:25:72.17:0,72,859	0/0:14,0:14:42.13:0,42,519	0/0:19,0:19:57.18:0,57,706	0/0:21,0:21:57.18:0,57,706	1/1:2,21:23:63.20:883,63,0	1/1:0,27:27:81.25:1130,81,0	0/0:34,0:33:96.27:0,96,1161	./.
chr10	52881424	.	A	AGTGTGTGTGTGTGTGT	11507.01	PASS	AB=0.858;AC=40;AF=0.714;AN=56;BaseQRankSum=0.644;DP=750;FS=2.363;HRun=0;HaplotypeScore=297.8035;InbreedingCoeff=0.5342;MQ=61.12;MQ0=5;MQRankSum=-6.066;QD=20.66;ReadPosRankSum=-3.882;VQSLOD=2.3300;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:45,0:40:24.07:736,24,0	1/1:11,0:11:9:287,9,0	0/0:39,0:22:5.89:0,6,146	0/0:30,0:20:3.01:0,3,60	1/1:16,10:28:3.01:158,3,0	1/1:31,0:29:15.03:826,15,0	1/1:30,0:30:17.96:206,18,0	1/1:33,0:31:32.56:646,33,0	1/1:26,0:25:9.01:260,9,0	1/1:25,0:24:39.42:1343,39,0	1/1:11,0:11:6.02:224,6,0	0/1:34,0:36:4.13:4,0,2212	0/0:28,0:33:39.13:0,39,1589	1/1:30,0:30:27.01:380,27,0	1/1:17,14:32:12:628,12,0	1/1:29,0:29:24.50:718,25,0	1/1:24,0:22:33.09:1614,33,0	1/1:10,0:9:15.05:748,15,0	0/1:11,0:13:19.18:223,0,19	1/1:8,0:20:15.75:145,16,0	0/1:36,0:38:64.87:398,0,65	0/0:26,0:26:45.15:0,45,1890	0/0:23,0:25:29.80:0,30,1188	0/0:37,0:40:66.14:0,66,2586	1/1:15,1:22:4.26:341,4,0	1/1:25,0:25:44.97:1435,45,0	0/1:14,0:29:7.89:77,0,8	1/1:4,0:3:5.98:113,6,0
chr10	52881740	.	TG	T	6422.09	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=11.087;DP=624;FS=9.578;HRun=9;HaplotypeScore=66.9999;InbreedingCoeff=0.9636;MQ=76.21;MQ0=0;MQRankSum=-1.521;QD=22.85;ReadPosRankSum=3.663;VQSLOD=5.4828;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,36:40:92.10:920,92,0	1/1:0,6:6:15.01:137,15,0	0/0:33,2:33:4.35:0,4,557	0/0:26,0:23:34.68:0,35,328	1/1:4,16:19:48.02:438,48,0	1/1:3,24:27:69.03:631,69,0	1/1:5,7:12:21:192,21,0	0/0:30,1:31:66.13:0,66,712	1/1:0,20:20:54.02:494,54,0	1/1:4,15:19:44.98:398,45,0	1/1:1,18:19:51.02:466,51,0	0/0:25,1:26:41.72:0,42,716	0/0:34,0:34:96.27:0,96,1098	1/1:2,21:23:60.03:549,60,0	1/1:1,21:22:60.03:549,60,0	1/1:0,21:21:57.03:522,57,0	0/0:30,0:30:84.19:0,84,943	0/0:7,0:7:18.05:0,18,208	0/0:17,0:16:8.39:0,8,279	0/0:19,0:19:51.14:0,51,577	0/0:33,0:33:84.15:0,84,913	0/0:22,0:22:57.16:0,57,647	0/0:15,0:15:42.12:0,42,483	0/0:21,0:21:51.15:0,51,588	1/1:4,15:19:45.02:412,45,0	1/1:6,23:29:66.01:603,66,0	0/0:27,0:27:72.21:0,72,826	1/1:0,4:4:12.01:110,12,0
chr10	52881871	.	CT	C	9171.43	PASS	AB=0.906;AC=43;AF=0.768;AN=56;BaseQRankSum=5.089;DP=625;FS=9.202;HRun=11;HaplotypeScore=64.7800;InbreedingCoeff=0.9082;MQ=66.71;MQ0=0;MQRankSum=-1.314;QD=17.57;ReadPosRankSum=0.892;VQSLOD=5.6960;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,11:21:42.97:327,43,0	1/1:2,7:9:20.97:172,21,0	0/0:7,0:7:18.04:0,18,183	0/0:10,0:10:14.54:0,15,112	1/1:6,23:29:33.87:480,34,0	1/1:4,24:28:71.90:591,72,0	1/1:4,19:23:50.93:419,51,0	1/1:7,23:30:65.87:538,66,0	1/1:6,14:20:41.93:345,42,0	1/1:8,23:31:68.89:566,69,0	1/1:4,28:34:78.10:612,78,0	0/0:23,1:25:47.71:0,48,652	0/1:26,3:29:4.70:5,0,555	1/1:1,21:22:50.94:419,51,0	1/1:1,26:27:65.92:542,66,0	1/1:1,15:18:40.02:305,40,0	1/1:5,25:30:62.86:511,63,0	1/1:1,5:6:8.99:74,9,0	1/1:3,21:24:59.90:490,60,0	1/1:1,20:21:53.88:438,54,0	1/1:3,19:22:38.94:320,39,0	0/0:18,0:18:42.09:0,42,441	0/0:18,0:20:47.95:0,48,494	0/0:22,0:23:53.96:0,54,551	1/1:4,20:25:58.95:474,59,0	1/1:5,25:31:76.93:619,77,0	1/1:2,33:35:95.71:778,96,0	1/1:0,6:6:17.98:148,18,0
chr10	52884433	.	G	GT	1965.06	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-9.824;DP=474;FS=3.956;HRun=9;HaplotypeScore=45.4807;InbreedingCoeff=0.9311;MQ=88.23;MQ0=0;MQRankSum=-1.819;QD=20.68;ReadPosRankSum=1.191;VQSLOD=4.0545;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:28:74.02:0,74,631	0/0:6,0:6:14.99:0,15,130	0/0:16,0:15:32.94:0,33,275	0/0:26,0:27:46.43:0,46,386	0/0:13,0:13:29.95:0,30,257	0/0:22,0:22:62.98:0,63,546	0/0:19,0:19:44.96:0,45,386	0/0:32,1:33:44.77:0,45,616	0/0:18,0:18:35.98:0,36,312	0/0:20,0:20:38.96:0,39,336	0/0:21,0:21:53.97:0,54,469	0/0:21,0:21:56.98:0,57,495	0/0:9,0:9:23.98:0,24,208	0/0:10,0:10:26.99:0,27,234	0/0:18,0:18:21.89:0,22,364	0/0:17,0:17:50.97:0,51,439	1/1:4,18:22:39.11:431,39,0	1/1:3,5:8:15.04:166,15,0	1/1:4,10:14:6.12:263,6,0	1/1:0,9:9:24.06:266,24,0	1/1:3,17:19:3.84:451,4,0	0/0:19,0:19:41.95:0,42,357	0/0:13,0:13:32.96:0,33,283	0/0:13,0:13:32.99:0,33,286	0/0:9,0:9:23.99:0,24,208	0/0:18,0:18:50.98:0,51,440	1/1:3,19:22:51.14:564,51,0	0/0:9,0:9:11.96:0,12,104
chr10	52884673	.	GTA	G	480.41	PASS	AB=0.778;AC=7;AF=0.152;AN=46;BaseQRankSum=1.905;DP=177;FS=5.341;HRun=0;HaplotypeScore=40.5938;InbreedingCoeff=0.5139;MQ=55.64;MQ0=3;MQRankSum=1.276;QD=20.02;ReadPosRankSum=0.288;VQSLOD=3.0400;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:6:15.05:0,15,255	0/0:1,0:1:3.01:0,3,51	0/0:17,0:8:8.40:0,8,71	0/0:17,0:3:1.55:0,2,4	0/0:7,0:7:12.04:0,12,204	0/0:13,0:14:33.11:0,33,556	./.	0/0:24,0:24:51.17:0,51,837	0/0:3,0:3:6.02:0,6,102	0/0:4,0:3:9.03:0,9,153	0/0:4,0:4:6.02:0,6,98	0/0:4,0:4:12.04:0,12,204	0/0:3,0:3:9.03:0,9,144	./.	0/0:4,0:5:9.03:0,9,153	0/0:2,0:1:3.01:0,3,50	./.	0/1:5,0:6:8.49:17,0,8	1/1:0,8:8:24.05:295,24,0	1/1:0,4:4:9.03:117,9,0	./.	0/0:2,0:2:3.01:0,3,45	0/0:1,0:1:3.01:0,3,51	./.	0/0:6,0:6:12.04:0,12,201	0/0:4,0:4:9.03:0,9,153	1/1:0,5:5:15.04:181,15,0	0/0:13,0:13:27.09:0,27,444
chr10	52884717	.	G	GTA	2038.67	PASS	AB=1.000;AC=27;AF=0.540;AN=50;BaseQRankSum=-2.410;DP=229;FS=8.816;HRun=0;HaplotypeScore=47.9507;InbreedingCoeff=0.6478;MQ=51.73;MQ0=8;MQRankSum=0.767;QD=17.57;ReadPosRankSum=0.047;VQSLOD=2.0650;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,1:8:9.49:127,9,0	./.	./.	0/0:7,0:2:3.01:0,3,37	1/1:0,12:12:6.02:106,6,0	1/1:2,12:14:24.08:414,24,0	1/1:0,1:1:3.01:53,3,0	0/0:41,0:37:22.27:0,22,828	1/1:0,3:3:3.01:53,3,0	1/1:6,3:8:18.05:280,18,0	1/1:1,10:11:6.02:102,6,0	0/0:7,0:7:21.07:0,21,288	0/0:3,0:3:9.03:0,9,123	1/1:2,2:4:6.02:90,6,0	1/1:0,6:5:3.01:53,3,0	1/1:2,5:6:2.99:24,3,0	0/0:15,0:14:8.76:0,9,124	0/0:11,0:9:12.04:0,12,165	0/0:9,0:7:21:0,21,265	0/0:5,0:5:12.02:0,12,165	0/1:4,0:4:31.75:43,0,32	0/0:1,0:1:3.01:0,3,41	0/0:2,0:2:6.02:0,6,82	./.	1/1:5,5:10:15.02:200,15,0	1/1:3,2:6:12.04:196,12,0	0/0:7,0:7:18.06:0,18,247	1/1:2,18:15:27.09:479,27,0
chr10	52884779	.	ATATATG	A	226.15	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=-1.606;DP=254;FS=8.120;HRun=0;HaplotypeScore=68.9201;InbreedingCoeff=0.4564;MQ=59.10;MQ0=3;MQRankSum=1.283;QD=5.65;ReadPosRankSum=1.183;VQSLOD=0.6400;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:19:42.17:0,42,521	0/0:4,0:4:12.04:0,12,168	0/0:2,0:2:3.01:0,3,34	0/0:1,0:1:0.47:0,0,1	0/1:16,0:16:15.98:16,0,283	0/0:15,0:15:26.92:0,27,360	0/0:2,0:2:6.02:0,6,87	0/0:32,0:31:84.18:0,84,1720	0/0:6,0:6:6.02:0,6,80	0/0:10,0:9:26.81:0,27,288	0/0:14,0:14:21.10:0,21,238	0/0:7,0:7:18.04:0,18,475	0/0:5,0:5:15.05:0,15,392	0/0:6,0:6:12.03:0,12,154	0/0:11,0:11:14.88:0,15,187	0/0:8,0:7:11.87:0,12,144	1/1:11,2:13:14.95:253,15,0	1/1:1,10:10:3.01:69,3,0	0/0:10,0:8:20.73:0,21,245	0/0:7,0:7:17.71:0,18,183	0/0:4,0:4:12.03:0,12,154	0/0:1,0:1:3.01:0,3,37	0/0:6,0:6:12.04:0,12,263	0/0:2,0:2:6.02:0,6,124	0/0:11,0:11:30.10:0,30,434	0/0:10,0:10:24.54:0,25,259	0/0:13,0:13:36.09:0,36,506	0/0:7,0:5:9.03:0,9,124
chr10	52884785	.	GTA	G	4149.24	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=8.578;DP=266;FS=13.355;HRun=0;HaplotypeScore=40.3741;InbreedingCoeff=0.7752;MQ=62.57;MQ0=3;MQRankSum=0.739;QD=19.85;ReadPosRankSum=5.254;VQSLOD=2.1516;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,19:22:39.12:488,39,0	1/1:0,5:5:12.04:150,12,0	0/0:3,0:3:3.01:0,3,37	0/0:1,0:1:0.89:0,1,2	1/1:4,11:16:26.92:314,27,0	1/1:3,12:15:27.09:338,27,0	1/1:0,2:2:6.02:75,6,0	0/0:32,0:31:84.22:0,84,1233	1/1:1,5:6:6.02:75,6,0	1/1:4,7:10:21.02:262,21,0	1/1:3,10:13:20.58:262,21,0	0/0:6,0:6:12.04:0,12,198	0/0:5,0:5:15.02:0,15,219	1/1:2,4:6:12.04:149,12,0	1/1:3,7:10:15.05:188,15,0	1/1:4,4:7:12.04:150,12,0	1/1:9,0:11:8.23:36,8,0	1/1:11,0:10:2.74:12,3,0	1/1:1,9:8:24.08:300,24,0	1/1:1,9:10:15.05:188,15,0	1/1:1,3:4:9.03:112,9,0	0/0:2,0:2:6.02:0,6,96	0/0:6,0:6:15.05:0,15,245	0/0:2,0:2:6.02:0,6,99	1/1:1,15:16:30.10:375,30,0	1/1:3,7:10:21.07:263,21,0	1/1:4,11:15:24.08:300,24,0	1/1:4,3:5:9.03:113,9,0
chr10	52886249	.	T	TG	311.80	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=-3.271;DP=693;FS=3.525;HRun=8;HaplotypeScore=69.5872;InbreedingCoeff=0.6169;MQ=79.49;MQ0=0;MQRankSum=-1.560;QD=7.09;ReadPosRankSum=-1.129;VQSLOD=0.8358;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:93:0,93,837	0/0:12,0:12:30.01:0,30,275	0/1:23,0:23:26.55:27,0,210	0/0:22,0:21:39.86:0,40,342	0/0:33,0:33:90.04:0,90,823	0/0:36,0:35:90.04:0,90,823	0/0:21,0:21:60.01:0,60,542	0/0:27,2:29:47.98:0,48,435	0/0:35,0:35:81.01:0,81,741	0/0:33,0:33:75.03:0,75,686	0/0:23,0:23:63.01:0,63,571	0/0:27,0:27:69.03:0,69,630	0/0:28,0:28:78.01:0,78,704	0/0:19,0:19:45:0,45,406	0/0:32,0:32:87.03:0,87,796	0/0:21,0:21:51:0,51,462	0/0:24,0:24:63.02:0,63,576	1/1:7,14:21:11.66:385,12,0	0/0:14,0:14:27.01:0,27,247	0/0:26,0:26:65.99:0,66,602	0/0:17,0:17:42:0,42,380	0/0:22,0:22:60.02:0,60,544	0/0:16,0:16:42.01:0,42,384	0/0:23,0:23:60:0,60,544	0/0:26,0:26:69.03:0,69,632	0/0:30,0:30:72.02:0,72,654	0/0:35,0:35:90.04:0,90,823	0/0:10,0:10:27.01:0,27,247
chr10	52886450	.	AT	A	2568.70	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=12.761;DP=608;FS=1.255;HRun=10;HaplotypeScore=57.0719;InbreedingCoeff=0.9703;MQ=68.88;MQ0=0;MQRankSum=-0.290;QD=20.55;ReadPosRankSum=0.430;VQSLOD=4.5064;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:66.10:0,66,714	0/0:7,0:7:18.05:0,18,199	0/0:10,0:10:18.01:0,18,175	0/0:4,0:4:4.82:0,5,35	0/0:28,0:28:78.19:0,78,846	0/0:32,0:32:81.19:0,81,879	0/0:20,0:20:60.15:0,60,656	0/0:26,0:26:38.92:0,39,565	0/0:19,0:19:51.14:0,51,564	0/0:29,1:30:57.01:0,57,828	0/0:29,0:29:84.23:0,84,926	0/0:20,0:20:51.14:0,51,564	0/0:33,0:33:87.24:0,87,961	0/0:22,0:22:66.15:0,66,714	0/0:38,0:38:98.07:0,98,1060	0/0:25,0:25:63.17:0,63,697	1/1:1,12:13:26.99:234,27,0	1/1:0,16:16:44.99:391,45,0	1/1:4,19:23:26.79:458,27,0	1/1:1,27:28:80.75:683,81,0	1/1:2,14:15:32.99:286,33,0	0/0:24,0:24:72.19:0,72,796	0/0:11,0:12:29.91:0,30,313	0/0:15,0:15:42.11:0,42,464	0/0:20,0:20:54.15:0,54,597	0/0:32,0:32:84.21:0,84,919	1/1:2,27:29:80.98:703,81,0	0/0:12,0:12:36.10:0,36,398
chr10	52886895	.	GT	G	794.07	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.517;DP=755;FS=11.191;HRun=8;HaplotypeScore=80.0249;InbreedingCoeff=0.9971;MQ=74.94;MQ0=7;MQRankSum=-1.556;QD=16.54;ReadPosRankSum=2.038;VQSLOD=2.7211;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:63.14:0,63,717	0/0:18,0:18:48.15:0,48,579	0/0:94,0:46:67.39:0,67,773	0/0:55,0:30:20.79:0,21,347	0/0:28,1:29:55.28:0,55,929	0/0:28,0:28:75.20:0,75,884	0/0:18,0:18:48.15:0,48,579	0/0:38,0:38:99:0,99,1073	0/0:16,0:16:45.14:0,45,540	0/0:27,0:27:72.19:0,72,840	0/0:25,0:25:66.15:0,66,748	0/0:21,0:21:57.09:0,57,629	0/0:23,0:23:66.16:0,66,758	0/0:22,0:22:56.96:0,57,622	0/0:22,0:22:57.12:0,57,637	0/0:21,0:21:60.16:0,60,705	1/1:1,22:23:54.04:511,54,0	1/1:2,23:25:42.05:405,42,0	0/0:20,0:20:54.13:0,54,620	0/0:32,0:32:90.23:0,90,1051	0/0:16,0:16:45.13:0,45,532	0/0:26,0:27:81.08:0,81,924	0/0:21,0:21:54.12:0,54,609	0/0:18,0:18:33.09:0,33,386	0/0:26,0:26:72.19:0,72,840	0/0:25,0:25:63.17:0,63,746	0/0:30,1:31:55.25:0,55,912	0/0:9,0:9:27.06:0,27,303
chr10	52887332	.	A	AAG	1985	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-9.038;DP=551;FS=0.619;HRun=0;HaplotypeScore=63.1637;InbreedingCoeff=0.9820;MQ=83.12;MQ0=0;MQRankSum=-0.728;QD=45.11;ReadPosRankSum=2.347;VQSLOD=5.2635;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:78.26:0,78,1092	0/0:11,0:11:33.11:0,33,462	0/0:15,0:15:24.06:0,24,314	0/0:20,0:20:26.15:0,26,432	0/0:33,0:33:93.30:0,93,1286	0/0:16,0:16:48.16:0,48,672	0/0:11,0:11:33.11:0,33,462	0/0:29,0:29:84.27:0,84,1145	0/0:22,0:22:63.21:0,63,880	0/0:21,0:21:63.21:0,63,883	0/0:14,0:14:42.13:0,42,572	0/0:18,0:18:51.17:0,51,714	0/0:33,0:33:90.30:0,90,1260	0/0:19,0:19:54.18:0,54,756	0/0:25,0:25:72.24:0,72,1009	0/0:18,0:18:42.14:0,42,588	1/1:1,28:29:78.27:1405,78,0	1/1:1,14:14:39.13:702,39,0	0/0:15,0:15:39.12:0,39,529	0/0:28,0:28:72.24:0,72,1008	0/0:15,0:15:42.14:0,42,588	0/0:22,0:22:57.17:0,57,779	0/0:12,0:12:33.11:0,33,460	0/0:5,0:5:12:0,12,146	0/0:15,0:15:39.12:0,39,532	0/0:20,0:20:57.19:0,57,799	0/0:25,0:25:57.19:0,57,798	0/0:15,0:15:45.15:0,45,630
chr10	52888491	.	C	CT	632.98	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.443;DP=720;FS=2.557;HRun=1;HaplotypeScore=75.4833;InbreedingCoeff=0.9796;MQ=86.54;MQ0=0;MQRankSum=-2.844;QD=16.23;ReadPosRankSum=1.195;VQSLOD=3.9112;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:84.27:0,84,1090	0/0:11,0:11:33.11:0,33,427	0/0:29,0:29:68.20:0,68,824	0/0:31,0:31:39.70:0,40,907	0/0:30,0:30:87.23:0,87,1083	0/0:28,0:28:84.23:0,84,1048	0/0:23,0:23:66.16:0,66,791	0/0:34,0:34:93.23:0,93,1130	0/0:26,0:26:75.21:0,75,944	0/0:30,0:30:84.26:0,84,1070	0/0:15,0:15:45.12:0,45,557	0/0:23,0:23:69.21:0,69,881	0/0:43,0:43:99:0,123,1582	0/0:18,0:18:54.18:0,54,701	0/0:30,0:30:90.29:0,90,1164	0/0:30,0:30:84.22:0,84,1034	1/1:8,24:32:64.06:656,64,0	1/1:4,3:7:11.05:93,11,0	0/0:16,0:15:45.13:0,45,570	0/0:33,0:33:90.28:0,90,1150	0/0:24,0:24:72.20:0,72,894	0/0:26,0:26:75.24:0,75,973	0/0:29,0:29:84.27:0,84,1090	0/0:30,0:30:84.26:0,84,1074	0/0:25,0:25:75.23:0,75,959	0/0:30,0:30:84.27:0,84,1089	0/0:28,0:28:75.19:0,75,927	0/0:10,0:10:29.99:0,30,366
chr10	52888494	.	C	CT	829	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.397;DP=717;FS=6.124;HRun=0;HaplotypeScore=76.5744;InbreedingCoeff=0.9832;MQ=87.04;MQ0=0;MQRankSum=-1.975;QD=21.26;ReadPosRankSum=0.993;VQSLOD=5.3992;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:84.28:0,84,1175	0/0:11,0:11:33.11:0,33,461	0/0:29,0:29:73.83:0,74,887	0/0:34,0:34:81.09:0,81,1038	0/0:31,0:31:90.29:0,90,1233	0/0:27,0:27:81.26:0,81,1115	0/0:20,0:20:60.18:0,60,817	0/0:34,0:34:90.28:0,90,1209	0/0:25,0:25:72.24:0,72,1007	0/0:29,0:29:87.29:0,87,1211	0/0:14,0:14:42.14:0,42,587	0/0:23,0:23:66.22:0,66,923	0/0:41,0:41:99:0,123,1704	0/0:18,0:18:54.18:0,54,755	0/0:30,0:30:90.30:0,90,1258	0/0:29,0:29:87.27:0,87,1180	1/1:8,24:32:69.19:805,69,0	1/1:4,3:7:12.03:141,12,0	0/0:16,0:15:48.14:0,48,652	0/0:34,0:34:96.30:0,96,1306	0/0:23,0:23:69.20:0,69,928	0/0:27,0:27:75.25:0,75,1046	0/0:32,0:32:93.29:0,93,1267	0/0:29,0:29:87.29:0,87,1212	0/0:25,0:25:75.25:0,75,1044	0/0:30,0:30:87.29:0,87,1215	0/0:27,0:27:78.25:0,78,1073	0/0:9,0:9:27.09:0,27,377
chr10	52888802	.	GGAAGAAAGGAAA	G	4472.99	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=11.752;DP=738;FS=6.806;HRun=0;HaplotypeScore=246.3911;InbreedingCoeff=0.9826;MQ=71.11;MQ0=0;MQRankSum=-6.818;QD=52.01;ReadPosRankSum=1.201;VQSLOD=3.7170;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:95.73:0,96,4951	0/0:9,0:9:24.07:0,24,1149	0/0:17,0:15:32.89:0,33,831	0/0:28,0:24:45.10:0,45,1406	0/0:37,0:37:87.27:0,87,4589	0/0:21,0:21:60.21:0,60,2985	0/0:30,0:31:93.20:0,93,3870	0/0:24,0:24:60.21:0,60,2913	0/0:33,0:33:90.30:0,90,4542	0/0:33,0:33:84.28:0,84,3782	0/0:25,0:25:72.22:0,72,3484	0/0:35,0:35:99:0,99,5139	0/0:27,0:27:69.24:0,69,3845	0/0:26,0:26:72.22:0,72,3798	0/0:28,0:28:78.27:0,78,4088	0/0:32,0:32:78.27:0,78,4277	0/0:38,0:38:42.81:0,43,5265	0/0:20,0:20:37.48:0,37,1929	1/1:2,20:22:60:1327,60,0	1/1:1,22:23:50.97:1464,51,0	1/1:2,18:20:9.03:271,9,0	0/0:23,0:23:60.19:0,60,2871	0/0:28,0:28:75.25:0,75,4015	0/0:33,0:33:82.33:0,82,3669	0/0:22,0:22:65.67:0,66,2956	0/0:36,0:36:99:0,102,4927	1/1:1,20:21:39.13:1410,39,0	0/0:9,0:9:27.09:0,27,1486
chr10	52889022	.	AG	A	3849.37	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=7.652;DP=664;FS=8.505;HRun=1;HaplotypeScore=107.8203;InbreedingCoeff=0.9977;MQ=67.89;MQ0=0;MQRankSum=0.687;QD=37.01;ReadPosRankSum=3.405;VQSLOD=3.2884;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,26:28:60.10:936,60,0	1/1:0,9:9:27.05:355,27,0	0/0:29,0:27:67.20:0,67,911	0/0:37,0:31:75.76:0,76,1001	0/0:23,0:23:69.21:0,69,1014	0/0:28,0:28:84.29:0,84,1285	0/0:15,0:15:42.13:0,42,619	0/0:23,0:23:63.21:0,63,960	0/0:26,0:26:78.21:0,78,1126	0/0:33,0:33:99:0,99,1452	0/0:23,0:23:69.19:0,69,988	0/0:22,0:22:66.21:0,66,989	0/0:22,0:22:66.18:0,66,945	0/0:21,0:21:60.17:0,60,859	1/1:0,36:36:93.31:1300,93,0	1/1:0,31:31:90.30:1258,90,0	0/0:23,0:23:66.03:0,66,926	0/0:9,0:9:24.01:0,24,338	0/0:9,0:9:27.09:0,27,414	0/0:31,0:31:93.29:0,93,1377	0/0:39,0:39:99:0,117,1648	0/0:17,0:17:51.16:0,51,757	0/0:26,0:26:78.25:0,78,1168	0/0:15,0:15:42.14:0,42,642	0/0:19,0:19:57.17:0,57,826	0/0:32,0:32:96.33:0,96,1468	0/0:31,0:30:93.30:0,93,1398	0/0:7,0:7:21.07:0,21,321
chr10	52889066	.	AC	A	678.36	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.854;DP=651;FS=4.318;HRun=1;HaplotypeScore=86.5627;InbreedingCoeff=0.9836;MQ=72.78;MQ0=0;MQRankSum=-7.069;QD=33.92;ReadPosRankSum=1.095;VQSLOD=3.4856;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:81.28:0,81,1292	0/0:10,0:10:30.10:0,30,479	0/0:24,0:23:51.99:0,52,852	0/0:25,0:25:72.13:0,72,1089	0/0:17,0:17:51.17:0,51,812	0/0:31,0:31:93.30:0,93,1462	0/0:12,0:12:36.12:0,36,565	0/0:56,0:56:99:0,165,2468	0/0:20,0:20:60.18:0,60,934	0/0:29,0:29:87.30:0,87,1384	0/0:25,0:25:75.22:0,75,1149	0/0:16,0:16:48.15:0,48,742	0/0:23,0:23:69.22:0,69,1078	0/0:21,0:21:63.18:0,63,953	0/0:30,0:30:81.24:0,81,1246	0/0:33,0:33:96.31:0,96,1508	1/1:0,15:15:45.15:627,45,0	1/1:0,5:5:12.04:167,12,0	0/0:18,0:18:54.17:0,54,817	0/0:27,0:27:81.28:0,81,1294	0/0:24,0:24:65.33:0,65,1080	0/0:27,0:27:81.22:0,81,1220	0/0:23,0:23:69.24:0,69,1097	0/0:15,0:15:45.11:0,45,657	0/0:21,0:21:63.15:0,63,970	0/0:32,0:32:96.31:0,96,1493	0/0:31,0:30:93.28:0,93,1433	0/0:13,0:13:39.04:0,39,522
chr10	52889206	.	T	TTGTG	440.72	PASS	AB=0.846;AC=2;AF=0.036;AN=56;BaseQRankSum=4.816;DP=637;FS=5.338;HRun=0;HaplotypeScore=105.0174;InbreedingCoeff=-0.0375;MQ=82.65;MQ0=0;MQRankSum=4.806;QD=11.91;ReadPosRankSum=-0.935;VQSLOD=2.6098;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:75.26:0,75,1489	0/0:7,0:7:21.07:0,21,420	0/1:14,7:21:99:493,0,586	0/1:15,1:16:36.51:37,0,675	0/0:36,0:36:99:0,102,1980	0/0:19,0:19:57.20:0,57,1139	0/0:17,0:17:48.16:0,48,949	0/0:37,0:37:99:0,105,1982	0/0:26,0:26:78.27:0,78,1546	0/0:23,0:23:69.23:0,69,1347	0/0:22,0:22:63.22:0,63,1248	0/0:26,0:26:78.24:0,78,1479	0/0:21,0:21:60.19:0,60,1152	0/0:26,0:26:72.25:0,72,1419	0/0:22,0:22:66.23:0,66,1310	0/0:25,0:25:69.22:0,69,1310	0/0:19,0:19:57.16:0,57,1070	0/0:8,0:8:18.06:0,18,357	0/0:18,0:18:54.17:0,54,1014	0/0:33,0:33:99:0,99,1892	0/0:12,0:12:36.12:0,36,719	0/0:25,0:25:69.24:0,69,1357	0/0:32,0:32:96.31:0,96,1849	0/0:12,0:12:33.11:0,33,629	0/0:34,0:34:99:0,102,2031	0/0:27,0:27:75.26:0,75,1498	0/0:36,0:36:99:0,108,2130	0/0:12,0:12:30.10:0,30,599
chr10	52890597	.	AT	A	8182.41	PASS	AB=0.917;AC=43;AF=0.768;AN=56;BaseQRankSum=10.172;DP=631;FS=11.080;HRun=11;HaplotypeScore=72.4909;InbreedingCoeff=0.8475;MQ=70.53;MQ0=0;MQRankSum=-2.113;QD=15.95;ReadPosRankSum=0.409;VQSLOD=4.7485;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,30:33:53.95:639,54,0	1/1:0,8:9:19.65:153,20,0	0/0:12,0:12:1.93:0,2,193	0/1:10,1:11:11.60:12,0,107	1/1:7,31:38:95.87:787,96,0	1/1:3,21:24:50.92:419,51,0	1/1:3,14:18:40.99:326,41,0	1/1:7,25:32:74.86:613,75,0	1/1:4,16:20:15.96:337,16,0	1/1:6,28:34:80.88:665,81,0	1/1:2,26:29:79.94:646,80,0	0/0:25,0:26:33.66:0,34,510	0/0:18,0:18:48.12:0,48,512	1/1:4,19:24:27.26:396,27,0	1/1:3,20:23:24.94:411,25,0	1/1:6,19:25:56.92:468,57,0	1/1:3,17:20:41.92:345,42,0	1/1:1,7:8:20.97:172,21,0	1/1:5,0:25:38.69:114,39,0	1/1:3,0:31:37.84:130,38,0	1/1:1,0:6:8.15:24,8,0	0/0:15,0:15:42.09:0,42,441	0/0:25,0:25:66.17:0,66,704	0/0:21,0:22:47.91:0,48,482	1/1:5,30:35:51.91:633,52,0	1/1:6,23:29:71.89:591,72,0	1/1:7,0:27:27.36:80,27,0	1/1:3,9:12:26.97:222,27,0
chr10	52891997	.	GT	G	2708.64	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=10.087;DP=592;FS=10.323;HRun=10;HaplotypeScore=60.4867;InbreedingCoeff=0.9846;MQ=76.19;MQ0=0;MQRankSum=-0.865;QD=18.81;ReadPosRankSum=-0.179;VQSLOD=3.8729;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:63.15:0,63,678	0/0:13,0:13:33.09:0,33,365	0/0:18,1:19:9.64:0,10,285	0/0:10,0:10:18.93:0,19,195	0/0:28,0:28:71.20:0,71,753	0/0:25,0:24:72.17:0,72,779	0/0:18,0:18:48.11:0,48,521	1/1:6,24:30:74.93:642,75,0	0/0:17,0:17:48.08:0,48,504	0/0:27,0:28:78.04:0,78,843	0/0:27,1:28:52.55:0,53,761	0/0:27,0:27:69.18:0,69,756	0/0:27,1:28:49.11:0,49,742	0/0:20,0:24:62.82:0,63,649	0/0:19,0:19:57.15:0,57,624	0/0:20,2:22:34.09:0,34,596	1/1:0,12:12:32.99:286,33,0	1/1:4,11:16:32.02:266,32,0	1/1:3,16:19:17.80:383,18,0	1/1:7,21:28:62.98:546,63,0	1/1:2,12:14:35.98:313,36,0	0/0:20,0:20:45.09:0,45,474	0/0:29,0:32:78.73:0,79,803	0/0:12,0:12:36.10:0,36,398	0/0:23,0:24:65.99:0,66,700	0/0:24,0:24:57.14:0,57,616	1/1:3,22:25:35.69:471,36,0	0/0:4,0:6:14.71:0,15,128
chr10	52893991	.	C	CAGACAGAA	15660.81	PASS	AB=1.000;AC=40;AF=0.714;AN=56;BaseQRankSum=-4.059;DP=771;FS=1.087;HRun=0;HaplotypeScore=148.7475;InbreedingCoeff=0.7828;MQ=66.72;MQ0=3;MQRankSum=-4.768;QD=27.24;ReadPosRankSum=-0.744;VQSLOD=4.2733;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,1:33:15.05:423,15,0	1/1:0,9:11:13.03:212,13,0	0/0:37,0:31:67.75:0,68,974	0/0:38,0:31:44.89:0,45,620	1/1:1,27:29:47.83:783,48,0	1/1:1,25:29:34.85:1267,35,0	1/1:0,29:32:18.02:591,18,0	1/1:42,0:40:99:1302,108,0	1/1:2,13:17:12.04:529,12,0	1/1:2,22:24:59.89:1491,60,0	1/1:0,16:16:26.95:565,27,0	0/0:20,0:20:60.08:0,60,1091	0/0:31,0:31:90.01:0,90,1518	1/1:0,18:21:21.07:823,21,0	1/1:1,32:36:18.06:793,18,0	1/1:2,31:36:36.59:1422,37,0	0/1:39,0:39:99:120,0,1116	0/1:25,0:25:99:188,0,471	1/1:6,0:23:57.86:551,58,0	1/1:2,0:32:65.88:755,66,0	1/1:6,0:30:18.14:382,18,0	0/0:18,0:18:54.07:0,54,1009	0/0:25,0:24:63.10:0,63,1278	0/0:27,0:27:53.24:0,53,1481	1/1:1,21:23:24.08:881,24,0	1/1:1,25:29:78.03:1967,78,0	1/1:3,0:36:45.11:483,45,0	1/1:3,7:10:3.01:132,3,0
chr10	52893994	.	A	AC	1501.02	PASS	AB=0.985;AC=17;AF=0.304;AN=56;BaseQRankSum=11.972;DP=725;FS=0.403;HRun=0;HaplotypeScore=127.4926;InbreedingCoeff=0.0902;MQ=67.74;MQ0=2;MQRankSum=-13.013;QD=4.36;ReadPosRankSum=0.534;VQSLOD=3.0504;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:29:8.62:70,0,9	0/0:9,0:9:0.99:0,1,68	0/0:36,0:31:77.77:0,78,1110	0/0:34,0:28:67.92:0,68,904	0/1:27,0:27:99:169,0,193	1/1:27,0:28:19.11:262,19,0	0/1:30,0:30:34.94:113,0,35	0/1:32,8:38:99:185,0,1147	0/1:12,0:12:27.78:36,0,28	0/1:20,0:20:97.51:98,0,321	0/1:14,0:14:52.03:180,0,52	0/0:22,0:22:66.20:0,66,885	0/0:33,0:33:96.31:0,96,1325	1/1:19,0:19:4.89:59,5,0	0/1:35,0:35:44.12:53,0,44	1/1:33,0:33:28.56:169,29,0	0/0:38,0:38:99:0,114,1525	0/0:23,0:23:66.22:0,66,919	0/0:22,0:22:28.47:0,28,525	0/0:30,0:30:14.45:0,14,526	0/0:29,0:28:20.29:0,20,213	0/0:18,0:18:54.18:0,54,755	0/0:24,0:23:66.21:0,66,908	0/0:24,0:25:72.19:0,72,954	0/1:18,0:18:1.76:177,0,2	0/1:28,0:28:97.98:98,0,491	0/0:36,0:37:41.52:0,42,244	0/1:11,0:11:3.89:4,0,75
chr10	52894808	.	GGTGTGT	G	964.84	PASS	AB=0.923;AC=21;AF=0.438;AN=48;BaseQRankSum=2.694;DP=613;FS=10.170;HRun=0;HaplotypeScore=125.1621;InbreedingCoeff=0.6095;MQ=65.44;MQ0=10;MQRankSum=-2.245;QD=4.39;ReadPosRankSum=1.284;VQSLOD=1.9736;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,7:43:0.47:0,0,1	./.	./.	./.	0/0:15,0:14:0:0,0,0	1/1:13,0:11:6.02:108,6,0	1/1:14,0:17:3.01:42,3,0	0/0:30,0:29:4.25:0,4,44	1/1:12,1:14:15.05:263,15,0	1/1:22,0:21:2.64:45,3,0	./.	0/0:23,0:24:20.18:0,20,307	0/0:19,0:19:11.98:0,12,178	1/1:18,0:18:3.01:58,3,0	1/1:28,5:33:9.92:164,10,0	1/1:16,4:19:6.01:88,6,0	1/1:26,0:31:8.24:130,8,0	1/1:23,0:23:10.78:60,11,0	0/0:17,0:17:12.04:0,12,300	0/0:16,0:16:8.72:0,9,276	0/0:59,0:57:45.15:0,45,1103	0/0:13,0:12:6.02:0,6,135	0/0:12,0:12:18.04:0,18,326	0/0:31,0:33:33.76:0,34,809	1/1:11,2:16:8.82:125,9,0	0/0:19,0:19:3.01:0,3,46	0/0:5,0:10:12.04:0,12,173	0/1:11,0:12:46.84:47,0,55
chr10	52895577	.	TC	T	2904.04	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=14.247;DP=650;FS=2.479;HRun=2;HaplotypeScore=105.2352;InbreedingCoeff=0.9591;MQ=71.86;MQ0=0;MQRankSum=-2.638;QD=28.75;ReadPosRankSum=1.648;VQSLOD=3.3338;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,117,1847	0/0:13,0:13:39.13:0,39,623	0/0:10,0:10:4.68:0,5,265	0/0:13,0:13:36.11:0,36,508	0/0:15,0:15:42.14:0,42,662	0/0:21,0:21:60.17:0,60,899	0/0:42,0:42:99:0,126,2003	0/0:19,0:19:51.16:0,51,771	0/0:22,0:22:66.22:0,66,1052	0/0:26,0:26:75.25:0,75,1180	0/0:5,0:5:15.05:0,15,240	0/0:31,0:31:93.30:0,93,1456	0/0:38,0:38:99:0,114,1796	0/0:25,0:25:75.26:0,75,1196	0/0:26,0:26:78.27:0,78,1242	0/0:29,0:29:87.28:0,87,1365	0/0:42,0:42:99:0,126,2005	0/0:24,0:24:69.23:0,69,1095	1/1:3,11:14:36.58:431,37,0	1/1:3,8:11:24.94:283,25,0	1/1:3,55:58:99:1727,148,0	0/0:20,0:20:60.19:0,60,929	0/0:11,0:11:33.11:0,33,528	0/0:22,0:22:66.23:0,66,1052	0/0:18,0:18:54.18:0,54,849	0/0:18,0:18:54.17:0,54,841	1/1:0,18:18:51.16:623,51,0	0/0:20,0:20:60.20:0,60,953
chr10	52897073	.	GGTGTGTGT	G	372.01	PASS	AB=0.905;AC=7;AF=0.135;AN=52;BaseQRankSum=4.741;DP=648;FS=1.180;HRun=0;HaplotypeScore=150.6857;InbreedingCoeff=0.6439;MQ=70.66;MQ0=16;MQRankSum=-4.003;QD=5.10;ReadPosRankSum=0.348;VQSLOD=2.4368;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:39:27.07:0,27,738	0/0:14,0:14:12.04:0,12,360	./.	./.	0/0:12,0:12:9.03:0,9,230	0/0:18,0:18:18.06:0,18,573	0/0:37,0:36:15.52:0,16,482	0/0:29,0:29:11.97:0,12,120	0/0:22,0:27:27.54:0,28,549	0/0:28,0:25:12.51:0,13,424	0/0:6,0:6:6.02:0,6,165	0/0:30,0:30:48.14:0,48,1504	0/0:17,0:19:21.01:0,21,451	0/0:28,0:27:27.08:0,27,819	0/0:21,0:24:24.06:0,24,743	0/0:17,0:21:33.57:0,34,997	0/1:17,0:19:9.43:9,0,14	1/1:18,3:20:11.66:176,12,0	0/0:15,0:15:0.47:0,0,1	1/1:13,5:19:8.94:96,9,0	0/0:38,4:39:0.47:0,0,1	0/0:11,0:10:15.05:0,15,520	0/0:14,0:13:6.02:0,6,136	0/0:35,0:35:39.13:0,39,1309	0/0:16,0:17:27.08:0,27,718	0/0:21,0:21:24.22:0,24,582	1/1:11,3:14:6.14:217,6,0	0/0:12,0:13:24.05:0,24,480
chr10	52897422	.	GA	G	8724.99	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=11.852;DP=698;FS=0.949;HRun=8;HaplotypeScore=71.5577;InbreedingCoeff=0.9954;MQ=91.17;MQ0=0;MQRankSum=-2.479;QD=23.58;ReadPosRankSum=3.629;VQSLOD=5.5796;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,35:37:87.13:839,87,0	1/1:0,11:11:30.05:289,30,0	0/0:28,0:28:68.23:0,68,775	0/0:30,0:30:62.02:0,62,643	1/1:1,13:14:26.34:230,26,0	1/1:8,27:35:69.10:666,69,0	1/1:1,33:34:90.14:868,90,0	1/1:5,35:40:99:962,102,0	1/1:1,30:31:87.14:840,87,0	1/1:3,25:28:78.12:752,78,0	1/1:1,5:6:12.02:116,12,0	0/0:21,0:21:51.14:0,51,600	0/0:28,0:28:78.22:0,78,925	1/1:2,22:24:63.10:608,63,0	1/1:2,24:26:57.09:550,57,0	1/1:2,29:31:77.99:753,78,0	0/0:32,0:32:93.29:0,93,1119	0/0:21,0:21:57.17:0,57,686	0/0:21,0:21:51.12:0,51,588	0/0:20,0:20:54.16:0,54,638	0/0:35,0:35:76.64:0,77,935	0/0:11,0:11:27.08:0,27,325	0/0:15,0:15:42.06:0,42,460	0/0:36,0:36:99:0,102,1192	1/1:3,18:21:42.07:405,42,0	1/1:2,15:17:44.99:413,45,0	0/0:30,0:30:75.22:0,75,890	1/1:0,15:15:45.07:434,45,0
chr10	52898272	.	GAGAGAGA	G	61.03	PASS	AB=0.950;AC=4;AF=0.080;AN=50;BaseQRankSum=2.171;DP=328;FS=0.000;HRun=0;HaplotypeScore=60.9419;InbreedingCoeff=0.2539;MQ=35.25;MQ0=44;MQRankSum=-0.165;QD=1.91;ReadPosRankSum=0.212;VQSLOD=1.1219;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:8,0:7:0:0,0,0	0/0:5,0:5:7.58:0,8,119	0/0:26,0:3:7.56:0,8,61	0/0:27,0:1:2.96:0,3,19	0/0:16,0:13:3.95:0,4,71	0/0:20,0:19:15.85:0,16,245	0/0:13,0:11:15.50:0,16,322	0/0:16,0:13:19.47:0,19,241	0/0:6,0:6:12.01:0,12,206	0/0:19,0:19:52.72:0,53,1033	0/0:10,0:9:0:0,0,0	0/0:6,0:6:12.04:0,12,424	0/0:5,0:5:11.98:0,12,280	0/0:9,0:8:5.54:0,6,202	./.	0/0:10,0:10:12.04:0,12,284	0/0:7,0:5:5.98:0,6,69	0/0:7,0:5:11.53:0,12,225	0/1:8,0:6:99:129,0,149	1/1:7,8:14:1.98:18,2,0	./.	0/0:11,0:8:12.04:0,12,450	0/0:14,0:12:14.63:0,15,513	0/0:20,0:18:30.10:0,30,833	./.	0/0:14,0:13:38.28:0,38,702	0/0:5,0:4:3.01:0,3,62	0/0:1,0:1:3.01:0,3,62
chr10	52898351	.	AT	A	721.42	PASS	AC=24;AF=0.857;AN=28;BaseQRankSum=1.523;DP=211;FS=25.215;HRun=1;HaplotypeScore=96.6184;InbreedingCoeff=0.4206;MQ=150.29;MQ0=10;MQRankSum=-2.809;QD=23.27;ReadPosRankSum=1.439;VQSLOD=2.3276;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,1:1:3.01:40,3,0	./.	0/0:66,1:35:44.68:0,45,593	0/0:91,2:56:71.39:0,71,789	./.	1/1:0,5:4:6.02:83,6,0	./.	./.	1/1:0,3:3:6.02:83,6,0	1/1:0,2:2:6.02:83,6,0	./.	./.	./.	1/1:0,2:2:3.01:41,3,0	./.	1/1:0,2:2:6.02:82,6,0	./.	1/1:0,1:1:3.01:42,3,0	1/1:0,1:1:3.01:41,3,0	./.	./.	./.	./.	./.	1/1:0,5:5:3.01:41,3,0	1/1:0,4:4:12.04:167,12,0	1/1:0,2:2:3.01:42,3,0	1/1:1,2:3:6.02:83,6,0
chr10	52898361	.	GATACAT	G	957.81	PASS	AC=26;AF=0.867;AN=30;BaseQRankSum=1.718;DP=222;FS=37.356;HRun=0;HaplotypeScore=123.0048;InbreedingCoeff=0.4082;MQ=134.51;MQ0=9;MQRankSum=-4.359;QD=18.78;ReadPosRankSum=0.291;VQSLOD=1.3625;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,0:2:2.94:18,3,0	./.	0/0:55,0:28:0.06:0,0,264	0/0:80,0:48:42.52:0,43,688	./.	1/1:5,1:5:8.97:82,9,0	./.	./.	1/1:3,0:3:5.91:51,6,0	1/1:2,2:4:11.96:160,12,0	./.	1/1:3,0:3:3.01:55,3,0	./.	1/1:4,0:4:3.01:43,3,0	./.	1/1:2,1:3:8.82:120,9,0	./.	1/1:1,0:1:0.47:1,0,0	1/1:3,1:3:8.73:74,9,0	./.	./.	./.	./.	./.	1/1:4,2:6:3.01:37,3,0	1/1:6,1:7:20.93:230,21,0	1/1:3,1:4:5.96:54,6,0	1/1:3,1:4:11.95:135,12,0
chr10	52898448	.	A	AG	4171.13	PASS	AC=30;AF=0.882;AN=34;BaseQRankSum=-0.450;DP=143;FS=2.384;HRun=0;HaplotypeScore=259.0625;InbreedingCoeff=0.3264;MQ=28.64;MQ0=0;MQRankSum=-1.033;QD=30.01;ReadPosRankSum=4.788;VQSLOD=2.8411;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:1,0:1:0.89:0,1,2	1/1:0,5:5:15.05:193,15,0	./.	./.	1/1:1,19:20:50.91:598,51,0	1/1:0,2:2:6.02:74,6,0	1/1:0,1:1:3.01:40,3,0	./.	./.	1/1:2,14:16:35.90:499,36,0	1/1:2,10:12:28.16:344,28,0	0/0:1,0:1:0.89:0,1,2	1/1:0,1:1:3.01:38,3,0	./.	./.	1/1:0,1:1:3.01:34,3,0	./.	./.	./.	1/1:1,22:23:56.72:694,57,0	./.	1/1:0,8:8:23.91:272,24,0	1/1:2,6:8:6.10:92,6,0	./.	1/1:1,17:18:51.10:641,51,0	1/1:2,7:9:18.81:274,19,0	1/1:1,4:4:4.27:73,4,0	1/1:1,9:10:21.92:305,22,0
chr10	52898588	.	A	AG	7225.55	PASS	AC=52;AF=0.963;AN=54;BaseQRankSum=1.470;DP=195;FS=0.000;HRun=0;HaplotypeScore=162.7606;InbreedingCoeff=0.2553;MQ=34.14;MQ0=0;MQRankSum=-1.732;QD=37.25;ReadPosRankSum=1.229;VQSLOD=4.1036;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,2:3:6.02:90,6,0	1/1:0,1:1:3.01:45,3,0	0/0:1,0:1:3.01:0,3,39	./.	1/1:0,3:3:3.01:45,3,0	1/1:1,8:9:24.08:360,24,0	1/1:1,11:12:33.11:479,33,0	1/1:5,16:21:54.01:707,54,0	1/1:0,13:13:39.13:583,39,0	1/1:0,4:4:12.04:182,12,0	1/1:1,7:8:20.98:278,21,0	1/1:3,9:12:27.09:402,27,0	1/1:2,9:11:29.96:391,30,0	1/1:1,3:4:9.03:133,9,0	1/1:1,13:14:42.07:595,42,0	1/1:3,16:19:51.10:728,51,0	1/1:1,1:2:3.01:45,3,0	1/1:0,1:1:3.01:45,3,0	1/1:0,3:3:9.03:136,9,0	1/1:1,10:11:30.02:422,30,0	1/1:0,1:1:3.01:45,3,0	1/1:0,3:2:6.02:91,6,0	1/1:2,8:9:20.98:280,21,0	1/1:0,4:4:12.04:179,12,0	1/1:0,9:9:24.08:359,24,0	1/1:0,5:5:15:201,15,0	1/1:4,4:7:23.77:267,24,0	1/1:0,3:3:9.03:135,9,0
chr10	52898617	.	A	AT	8106.23	PASS	AB=1.000;AC=53;AF=0.981;AN=54;DP=213;FS=0.000;HRun=1;HaplotypeScore=177.6221;InbreedingCoeff=0.2213;MQ=41.56;MQ0=0;QD=38.06;VQSLOD=4.2375;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,4:4:8.94:106,9,0	1/1:0,2:2:5.88:36,6,0	./.	0/1:3,0:3:0.07:0,0,0	1/1:1,6:7:20.86:233,21,0	1/1:1,13:14:42.14:626,42,0	1/1:2,8:10:27.01:375,27,0	1/1:5,15:20:54.18:807,54,0	1/1:1,13:14:42.07:599,42,0	1/1:1,7:8:21.07:307,21,0	1/1:1,5:5:12.04:177,12,0	1/1:0,14:14:42.14:626,42,0	1/1:0,8:8:24.08:358,24,0	1/1:1,4:5:14.94:171,15,0	1/1:5,8:13:33.01:421,33,0	1/1:0,19:19:57.19:850,57,0	1/1:0,4:4:11.87:123,12,0	1/1:0,1:1:3.01:45,3,0	1/1:0,3:3:6.02:90,6,0	1/1:3,7:10:20.99:284,21,0	1/1:0,4:4:11.87:123,12,0	1/1:0,5:5:14.97:195,15,0	1/1:1,7:8:24.08:356,24,0	1/1:1,3:4:6.49:90,6,0	1/1:2,10:12:32.94:436,33,0	1/1:1,4:5:15.05:223,15,0	1/1:0,8:7:24.08:358,24,0	1/1:0,2:2:6.02:90,6,0
chr10	52905476	.	AC	A	6022.12	PASS	AB=0.850;AC=44;AF=0.786;AN=56;BaseQRankSum=2.753;DP=560;FS=18.336;HRun=11;HaplotypeScore=76.5364;InbreedingCoeff=0.4182;MQ=72.62;MQ0=0;MQRankSum=-1.647;QD=11.56;ReadPosRankSum=3.626;VQSLOD=2.7086;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:13,7:20:23.90:191,24,0	1/1:6,8:14:23.95:197,24,0	0/0:11,0:10:12.87:0,13,104	0/1:14,0:13:2.05:2,0,27	0/1:16,4:20:31.26:31,0,95	0/1:12,9:21:0.02:195,0,0	1/1:16,10:28:21.56:288,22,0	1/1:19,11:30:35.90:295,36,0	1/1:11,7:18:43.96:345,44,0	1/1:13,7:20:25.97:202,26,0	1/1:18,6:24:25.01:183,25,0	0/0:16,0:16:14.98:0,15,133	0/1:20,2:22:16.21:16,0,239	1/1:12,6:18:20.90:171,21,0	1/1:20,6:28:42.88:323,43,0	1/1:15,11:27:25.97:397,26,0	1/1:3,13:16:38.95:320,39,0	1/1:2,7:9:1.55:107,2,0	1/1:7,13:20:38.95:320,39,0	1/1:11,20:31:59.84:491,60,0	1/1:4,26:30:74.91:615,75,0	0/1:6,3:9:18.61:19,0,26	0/0:12,0:12:3.48:0,3,33	0/1:25,1:26:1.17:1,0,349	1/1:14,2:18:27.97:206,28,0	1/1:10,4:15:20.95:172,21,0	1/1:5,35:40:99:886,108,0	1/1:0,2:2:5.99:49,6,0
chr10	52906968	.	A	AGTGTGTGT	6786.38	PASS	AB=1.000;AC=24;AF=0.429;AN=56;BaseQRankSum=13.123;DP=570;FS=6.624;HRun=0;HaplotypeScore=196.2137;InbreedingCoeff=-0.1778;MQ=67.14;MQ0=4;MQRankSum=-12.170;QD=17.27;ReadPosRankSum=-1.885;VQSLOD=2.6533;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:23:99:278,0,203	0/1:5,0:5:38.90:144,0,39	0/0:38,0:23:66.05:0,66,1170	0/0:27,0:24:52.60:0,53,816	0/1:11,0:11:62.10:62,0,128	0/1:25,0:25:99:466,0,310	0/1:17,0:17:99:106,0,344	0/1:47,0:46:99:915,0,937	0/1:19,0:19:96.70:815,0,97	0/1:14,0:13:99:120,0,280	0/0:11,0:11:12.48:0,12,148	0/0:29,0:29:72.22:0,72,1732	0/0:22,0:22:66.17:0,66,1589	0/1:18,0:17:99:355,0,185	0/1:20,0:20:99:269,0,193	0/1:30,0:29:99:403,0,389	0/1:22,0:22:99:109,0,269	0/1:9,0:9:99:192,0,113	1/1:16,0:16:17.40:373,17,0	1/1:22,3:26:16.46:521,16,0	1/1:23,2:25:12.98:337,13,0	0/0:8,0:8:21.05:0,21,446	0/0:16,0:16:48.13:0,48,1019	0/0:26,0:26:69.22:0,69,1615	0/1:14,0:14:99:170,0,250	0/1:17,0:17:99:178,0,423	1/1:25,1:27:38.56:821,39,0	0/1:6,0:6:34.27:154,0,34
chr10	52906971	.	A	ATGTGTGTGTGTGTG	13160.99	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=2.015;DP=672;FS=7.083;HRun=0;HaplotypeScore=242.4361;InbreedingCoeff=0.8101;MQ=61.26;MQ0=4;MQRankSum=-8.219;QD=27.53;ReadPosRankSum=-2.187;VQSLOD=2.6859;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:38:18.04:698,18,0	1/1:2,0:7:6.02:286,6,0	0/0:40,0:23:6.02:0,6,119	0/0:27,0:22:8.98:0,9,77	1/1:8,0:14:8.41:263,8,0	1/1:17,0:32:20.45:910,20,0	1/1:15,0:20:0.49:237,0,0	1/1:46,0:45:66.20:2080,66,0	1/1:7,0:27:36.12:1618,36,0	1/1:8,0:21:28.81:712,29,0	0/0:6,0:22:0.21:0,0,1	0/0:27,0:29:53.39:0,53,1894	0/0:23,0:24:60.15:0,60,1973	1/1:10,0:23:18.06:762,18,0	1/1:13,0:32:14.45:845,14,0	1/1:20,0:37:18.06:818,18,0	1/1:22,0:22:15.04:459,15,0	1/1:8,1:9:9.03:555,9,0	1/1:15,0:15:15.04:394,15,0	1/1:25,0:25:17.42:284,17,0	1/1:27,0:26:9.64:355,10,0	0/0:7,0:8:15.02:0,15,451	0/0:15,0:16:29.59:0,30,915	0/0:27,0:28:37.76:0,38,1716	1/1:9,0:20:6.02:285,6,0	1/1:11,0:26:26.24:670,26,0	1/1:28,0:27:33.07:621,33,0	1/1:5,0:6:8.68:308,9,0
chr10	52907018	.	G	GTA	879.76	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-2.386;DP=576;FS=0.000;HRun=0;HaplotypeScore=112.9756;InbreedingCoeff=0.9291;MQ=73.30;MQ0=1;MQRankSum=-4.618;QD=38.25;ReadPosRankSum=0.147;VQSLOD=5.4673;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:24.01:0,24,305	0/0:6,0:6:9.03:0,9,115	0/0:27,0:24:45.14:0,45,570	0/0:21,0:18:36.09:0,36,443	0/0:14,0:14:30.10:0,30,382	0/0:20,0:20:24.08:0,24,306	0/0:14,0:14:36.12:0,36,458	0/0:42,0:42:99:0,114,1420	0/0:21,0:21:9.03:0,9,115	0/0:25,0:25:51.15:0,51,638	0/0:20,0:20:36.10:0,36,444	0/0:25,0:25:54.16:0,54,674	0/0:25,0:25:66.18:0,66,812	0/0:20,0:20:24.08:0,24,305	0/0:21,0:21:18.06:0,18,229	0/0:26,0:25:42.13:0,42,535	1/1:2,13:16:39.13:649,39,0	1/1:0,7:7:21.07:351,21,0	0/0:19,0:19:45.14:0,45,570	0/0:15,0:15:33.09:0,33,403	0/0:21,0:20:39.12:0,39,493	0/0:24,0:24:72.22:0,72,903	0/0:19,0:19:54.17:0,54,687	0/0:24,0:24:60.15:0,60,734	0/0:15,0:15:18.06:0,18,229	0/0:29,0:29:72.18:0,72,916	0/0:25,0:25:66.21:0,66,836	0/0:9,0:9:24.08:0,24,305
chr10	52907306	.	TCATCCATC	T	5932.51	PASS	AB=0.910;AC=32;AF=0.571;AN=56;BaseQRankSum=5.835;DP=698;FS=5.685;HRun=0;HaplotypeScore=177.6469;InbreedingCoeff=0.5990;MQ=67.19;MQ0=14;MQRankSum=-6.358;QD=15.57;ReadPosRankSum=-2.319;VQSLOD=3.2081;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:33,3:36:21.02:477,21,0	1/1:7,0:7:9:140,9,0	0/0:52,0:23:5.58:0,6,27	0/0:51,0:28:0.47:0,0,1	1/1:9,11:20:8.88:110,9,0	1/1:11,14:25:24.08:587,24,0	1/1:13,7:20:3:69,3,0	1/1:29,0:29:17.98:153,18,0	1/1:16,11:26:18.06:443,18,0	1/1:9,15:24:39.10:718,39,0	1/1:9,6:15:3.01:74,3,0	0/0:28,0:28:57.15:0,57,1811	0/0:33,0:33:54.16:0,54,1820	0/1:15,19:34:0.92:499,0,1	1/1:6,26:32:39.13:959,39,0	1/1:13,8:21:21.07:523,21,0	0/0:15,0:30:38.93:0,39,331	0/0:6,0:9:9:0,9,126	0/1:17,0:16:10.79:102,0,11	0/1:13,0:13:6.54:120,0,7	0/0:40,0:40:8.84:0,9,60	0/0:22,0:22:42.04:0,42,1227	0/0:24,0:24:51.04:0,51,1735	0/0:28,0:28:54.17:0,54,2073	1/1:5,15:20:9.03:224,9,0	1/1:7,8:15:27:462,27,0	0/1:22,0:22:18.70:248,0,19	1/1:4,0:4:2.99:24,3,0
chr10	52909089	.	CTCTG	C	4402.07	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=12.523;DP=754;FS=7.155;HRun=0;HaplotypeScore=152.7295;InbreedingCoeff=0.9892;MQ=85.61;MQ0=0;MQRankSum=-8.686;QD=46.83;ReadPosRankSum=3.992;VQSLOD=5.0154;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,120,3165	0/0:7,0:7:18.04:0,18,402	0/0:29,0:29:78.27:0,78,1917	0/0:21,0:21:45.58:0,46,1238	0/0:31,0:31:90.29:0,90,2315	0/0:39,0:39:99:0,105,2666	0/0:28,0:28:81.28:0,81,2129	0/0:43,0:43:99:0,114,2868	0/0:28,0:28:84.29:0,84,2209	0/0:38,0:38:99:0,102,2668	0/0:27,0:27:78.27:0,78,2049	0/0:21,0:21:63.22:0,63,1625	0/0:46,0:46:99:0,129,3350	0/0:32,0:32:90.31:0,90,2260	0/0:28,0:28:84.29:0,84,2168	0/0:22,0:22:60.21:0,60,1584	0/0:20,0:20:57.20:0,57,1496	0/0:5,0:5:12.04:0,12,316	1/1:2,18:20:54.18:982,54,0	1/1:0,24:24:66.23:1213,66,0	1/1:0,22:23:45.15:828,45,0	0/0:27,0:27:78.27:0,78,2053	0/0:22,0:22:66.23:0,66,1741	0/0:33,0:32:93.32:0,93,2455	0/0:26,0:26:75.24:0,75,1905	0/0:31,0:31:84.28:0,84,2166	1/1:2,25:27:75.26:1379,75,0	0/0:15,0:15:42.14:0,42,1108
chr10	52909859	.	GT	G	2523.15	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=11.676;DP=664;FS=2.991;HRun=8;HaplotypeScore=93.8621;InbreedingCoeff=0.9932;MQ=74.21;MQ0=0;MQRankSum=-5.647;QD=23.80;ReadPosRankSum=-0.776;VQSLOD=3.6866;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:57.09:0,57,669	0/0:17,0:17:51.13:0,51,593	0/0:7,0:7:15.04:0,15,164	0/0:18,0:18:31.66:0,32,321	0/0:40,0:40:99:0,111,1330	0/0:21,0:21:63.18:0,63,745	0/0:24,0:24:63.19:0,63,761	0/0:30,0:30:72.21:0,72,860	0/0:24,0:24:69.20:0,69,824	0/0:24,0:24:63.19:0,63,761	0/0:25,0:25:69.20:0,69,825	0/0:24,0:24:66.18:0,66,776	0/0:26,0:26:72.22:0,72,869	0/0:28,0:28:72.22:0,72,869	0/0:30,0:30:78.23:0,78,930	0/0:20,0:20:51.15:0,51,605	0/0:22,0:22:66.13:0,66,755	0/0:27,0:27:69.17:0,69,817	1/1:9,8:17:39.03:362,39,0	1/1:3,37:40:99:1106,117,0	1/1:5,13:17:39.06:376,39,0	0/0:26,0:26:66.20:0,66,790	0/0:27,0:27:72.21:0,72,858	0/0:21,0:21:60.17:0,60,712	0/0:25,0:25:66.15:0,66,740	0/0:26,0:26:72.21:0,72,860	1/1:1,30:31:87.13:839,87,0	0/0:6,0:6:17.98:0,18,188
chr10	52909908	.	GA	G	5916.71	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=16.460;DP=703;FS=2.851;HRun=2;HaplotypeScore=78.0551;InbreedingCoeff=0.9983;MQ=78.91;MQ0=0;MQRankSum=-6.256;QD=35.86;ReadPosRankSum=1.621;VQSLOD=5.5498;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:81.26:0,81,1192	0/0:14,0:14:42.14:0,42,629	0/0:19,0:19:57.18:0,57,824	0/0:16,0:16:42.14:0,42,626	0/0:38,0:38:99:0,114,1709	0/0:30,0:30:87.25:0,87,1279	0/0:26,0:26:75.24:0,75,1104	0/0:34,0:34:96.30:0,96,1385	0/0:25,0:25:75.24:0,75,1104	0/0:33,0:33:99:0,99,1467	0/0:27,0:27:78.26:0,78,1163	0/0:28,0:28:81.23:0,81,1188	0/0:37,0:37:99:0,111,1641	0/0:29,0:29:87.29:0,87,1301	0/0:25,0:25:75.23:0,75,1083	0/0:17,0:17:48.16:0,48,719	1/1:1,26:27:75.24:974,75,0	1/1:0,27:27:69.22:896,69,0	1/1:0,15:15:45.15:582,45,0	1/1:1,43:44:99:1689,132,0	1/1:1,22:22:51.08:651,51,0	0/0:20,0:20:57.19:0,57,848	0/0:24,0:24:69.22:0,69,1014	0/0:16,0:16:45.15:0,45,672	0/0:23,0:23:69.21:0,69,996	0/0:24,0:24:69.22:0,69,998	1/1:1,28:29:87.28:1125,87,0	0/0:6,0:6:18.06:0,18,270
chr10	52910064	.	AG	A	4150.73	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=14.710;DP=714;FS=1.772;HRun=1;HaplotypeScore=85.0086;InbreedingCoeff=0.9949;MQ=88.09;MQ0=0;MQRankSum=-2.995;QD=37.73;ReadPosRankSum=3.755;VQSLOD=4.2581;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,150,2323	0/0:5,0:5:15.03:0,15,215	0/0:27,0:27:78.20:0,78,1153	0/0:23,0:23:66.17:0,66,973	0/0:20,0:20:60.19:0,60,925	0/0:18,0:18:51.16:0,51,790	0/0:24,0:24:72.23:0,72,1125	0/0:41,0:41:99:0,120,1855	0/0:23,0:23:69.24:0,69,1099	0/0:25,0:25:75.21:0,75,1131	0/0:11,0:11:33.08:0,33,478	0/0:35,0:35:99:0,105,1652	0/0:42,0:42:99:0,126,1953	0/0:23,0:23:69.22:0,69,1079	0/0:28,0:28:84.27:0,84,1312	0/0:25,0:25:75.25:0,75,1183	0/0:30,0:30:90.31:0,90,1436	0/0:16,0:16:48.11:0,48,738	1/1:2,17:19:54.17:738,54,0	1/1:0,31:31:84.20:1149,84,0	1/1:0,35:35:93.31:1300,93,0	0/0:19,0:19:57.19:0,57,909	0/0:31,0:31:87.29:0,87,1382	0/0:24,0:24:72.25:0,72,1151	0/0:22,0:22:66.20:0,66,1007	0/0:31,0:31:90.27:0,90,1351	1/1:0,25:25:69.23:963,69,0	0/0:8,0:8:24.08:0,24,378
chr10	52915297	.	GTCTCTA	G	4296.33	PASS	AB=0.774;AC=24;AF=0.429;AN=56;BaseQRankSum=-3.895;DP=570;FS=1.020;HRun=0;HaplotypeScore=123.5437;InbreedingCoeff=0.2090;MQ=56.25;MQ0=33;MQRankSum=-4.551;QD=11.10;ReadPosRankSum=-2.263;VQSLOD=3.7036;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:6,20:25:15.02:132,0,15	0/0:12,0:12:24.08:0,24,462	0/0:20,0:10:30.10:0,30,439	0/0:19,0:12:30.09:0,30,433	0/1:2,29:29:0:0,0,0	1/1:3,18:19:9.03:212,9,0	1/1:2,0:11:15.05:214,15,0	1/1:2,0:28:75.22:1031,75,0	1/1:5,16:20:9.03:212,9,0	1/1:1,22:23:60.11:1008,60,0	0/1:5,10:10:0:0,0,0	0/0:25,0:25:31.77:0,32,695	0/0:20,0:20:40.90:0,41,374	1/1:1,21:21:12.04:282,12,0	0/0:27,0:24:16.96:0,17,427	0/0:13,0:9:15.05:0,15,321	0/1:21,0:19:30.72:31,0,94	0/1:16,0:14:33.80:34,0,103	0/1:23,0:23:6.17:444,0,6	0/1:22,0:22:44.25:44,0,295	0/1:16,0:16:45.43:45,0,179	0/0:15,0:15:17.37:0,17,245	0/0:14,0:14:19.74:0,20,244	0/0:15,0:15:25.55:0,26,321	0/1:7,0:18:99:215,0,176	0/1:0,1:17:99:152,0,225	0/1:20,0:20:99:178,0,262	0/1:2,17:19:31.15:62,0,31
chr10	52915299	.	C	CTG	4819.67	PASS	AB=0.926;AC=29;AF=0.518;AN=56;BaseQRankSum=-0.674;DP=570;FS=1.016;HRun=0;HaplotypeScore=101.8552;InbreedingCoeff=0.6147;MQ=55.94;MQ0=34;MQRankSum=-0.968;QD=12.72;ReadPosRankSum=-1.802;VQSLOD=4.3321;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:25:4.92:5,0,11	1/1:1,0:13:24.01:251,24,0	0/0:21,0:10:30.10:0,30,442	0/0:18,0:11:30.09:0,30,432	0/1:29,0:29:0:0,0,0	0/0:18,0:18:7.97:0,8,34	1/1:13,0:11:14.71:89,15,0	1/1:30,0:29:71.41:558,71,0	0/0:18,0:18:7.91:0,8,34	0/1:22,0:22:8.39:181,0,8	0/1:10,0:10:0:0,0,0	0/0:15,0:25:63.16:0,63,848	0/0:8,0:20:45.07:0,45,514	0/0:21,0:21:10.76:0,11,48	1/1:0,0:23:27.07:297,27,0	1/1:0,0:9:15.04:167,15,0	1/1:2,5:20:15:198,15,0	1/1:7,4:16:11:115,11,0	1/1:2,20:22:63.18:1078,63,0	1/1:1,21:22:26.96:517,27,0	1/1:0,16:16:20.81:403,21,0	0/0:6,0:15:20.96:0,21,273	0/0:5,0:14:21.04:0,21,280	0/0:9,0:15:27.07:0,27,352	0/1:19,0:17:34.79:70,0,35	0/1:21,0:18:40.38:89,0,40	1/1:0,21:21:42.14:801,42,0	0/1:19,0:19:1.38:1,0,32
chr10	52916070	.	A	ATTGT	10472.27	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=0.030;DP=684;FS=4.700;HRun=0;HaplotypeScore=110.4641;InbreedingCoeff=0.9996;MQ=75.59;MQ0=0;MQRankSum=-6.312;QD=61.24;ReadPosRankSum=0.570;VQSLOD=6.5948;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,111,2005	0/0:10,0:10:27.09:0,27,503	0/0:22,0:22:59.12:0,59,998	0/0:24,0:24:63:0,63,1039	0/0:15,0:15:27.09:0,27,504	0/0:24,0:24:72.23:0,72,1312	0/0:16,0:16:42.11:0,42,719	0/0:39,0:39:99:0,99,1723	0/0:16,0:16:48.15:0,48,865	0/0:27,0:27:78.22:0,78,1385	0/0:14,0:14:36.11:0,36,640	0/0:26,0:26:78.25:0,78,1421	0/0:22,0:22:60.19:0,60,1081	0/0:25,0:25:72.25:0,72,1325	0/0:37,0:37:99:0,105,1867	0/0:23,0:23:66.21:0,66,1195	1/1:3,32:35:84.29:2240,84,0	1/1:2,21:23:63.14:1556,63,0	1/1:6,20:26:72.18:1665,72,0	1/1:2,21:24:69.05:1503,69,0	1/1:0,32:33:72.20:1835,72,0	0/0:21,0:21:60.19:0,60,1087	0/0:29,0:29:83.86:0,84,1471	0/0:19,0:19:57.15:0,57,1028	0/0:19,0:19:51.17:0,51,944	0/0:25,0:25:69.23:0,69,1259	1/1:2,28:29:66.23:1673,66,0	0/0:19,0:19:57.20:0,57,1051
chr10	52916384	.	A	AACACACAC	11989.20	PASS	AB=1.000;AC=41;AF=0.759;AN=54;BaseQRankSum=-0.843;DP=612;FS=4.625;HRun=0;HaplotypeScore=171.6525;InbreedingCoeff=0.8064;MQ=58.30;MQ0=8;MQRankSum=-7.892;QD=25.78;ReadPosRankSum=-2.987;VQSLOD=4.0883;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:20,5:26:15.05:499,15,0	1/1:6,4:12:9.03:369,9,0	0/0:19,0:11:2.97:0,3,20	./.	1/1:18,7:29:17.66:615,18,0	1/1:16,4:23:6.02:246,6,0	1/1:16,1:17:1.39:616,1,0	1/1:40,0:39:40.93:994,41,0	1/1:13,6:22:12.04:417,12,0	1/1:11,4:19:24.08:656,24,0	1/1:8,3:14:9.03:350,9,0	0/0:21,0:21:27.06:0,27,531	0/0:27,0:27:45.13:0,45,973	1/1:16,4:22:27.09:926,27,0	1/1:10,5:17:15.69:627,16,0	1/1:18,6:26:24.08:787,24,0	1/1:22,0:22:24.55:697,25,0	1/1:10,0:10:9.03:249,9,0	1/1:25,0:25:19.48:408,19,0	1/1:23,0:26:11.59:432,12,0	0/1:15,0:14:0.22:0,0,0	0/0:15,0:16:17.95:0,18,393	0/0:29,0:29:48.63:0,49,1105	0/0:17,0:20:27.06:0,27,528	1/1:13,11:28:23.73:874,24,0	1/1:21,9:33:45.15:1355,45,0	1/1:23,0:26:20.89:733,21,0	1/1:8,0:8:9:140,9,0
chr10	52917920	.	GAT	G	309.65	PASS	AB=1.000;AC=13;AF=0.342;AN=38;BaseQRankSum=-0.208;DP=186;FS=1.210;HRun=0;HaplotypeScore=28.7996;InbreedingCoeff=0.5286;MQ=70.06;MQ0=5;MQRankSum=1.636;QD=7.04;ReadPosRankSum=1.675;VQSLOD=2.4070;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:11:2.70:0,3,25	0/0:4,0:7:17.27:0,17,128	./.	0/0:15,0:9:2.80:0,3,37	./.	0/1:3,0:3:0:0,0,0	./.	0/0:27,1:26:6.71:0,7,386	./.	0/0:4,0:4:3.01:0,3,39	./.	1/1:4,2:6:6.02:70,6,0	1/1:3,0:4:2.84:14,3,0	./.	0/0:3,0:4:3:0,3,26	0/0:2,0:5:6:0,6,53	0/0:15,0:15:8.21:0,8,71	0/0:9,0:9:7.51:0,8,46	1/1:6,3:9:8.86:84,9,0	1/1:5,4:9:12.04:139,12,0	./.	1/1:0,0:1:2.84:14,3,0	0/0:4,0:4:3:0,3,27	./.	0/0:7,0:7:3:0,3,25	./.	1/1:8,3:12:11.87:118,12,0	0/0:11,0:13:9.47:0,9,78
chr10	52918448	.	ACAT	A	12814.48	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=19.494;DP=721;FS=5.098;HRun=0;HaplotypeScore=159.6262;InbreedingCoeff=0.9998;MQ=87.29;MQ0=0;MQRankSum=-13.080;QD=36.93;ReadPosRankSum=4.253;VQSLOD=5.7420;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,19:24:57.17:793,57,0	1/1:0,10:10:30.10:429,30,0	0/0:31,0:30:90.28:0,90,1861	0/0:30,0:30:80.39:0,80,1741	1/1:4,21:25:69.17:917,69,0	1/1:5,13:17:45.13:640,45,0	1/1:6,14:20:45.13:561,45,0	1/1:5,21:26:72.23:960,72,0	1/1:2,15:17:48.16:681,48,0	1/1:4,28:32:87.29:1252,87,0	1/1:6,24:30:69.17:929,69,0	0/0:34,0:34:99:0,102,2402	0/0:38,0:38:99:0,114,2555	1/1:10,16:26:57.17:796,57,0	1/1:3,29:32:87.21:1247,87,0	1/1:3,27:30:87.29:1298,87,0	0/0:34,0:34:99:0,99,2284	0/0:21,0:20:54.16:0,54,1195	0/0:23,0:23:69.23:0,69,1586	0/0:35,0:35:99:0,105,2314	0/0:38,0:38:99:0,105,2458	0/0:21,0:21:60.21:0,60,1419	0/0:28,0:28:84.29:0,84,1985	0/0:19,0:19:57.20:0,57,1320	1/1:1,21:22:60.20:894,60,0	1/1:2,24:26:75.25:1065,75,0	0/0:22,0:22:63.22:0,63,1431	1/1:2,7:9:27.06:353,27,0
chr10	52918454	.	TC	T	9825.99	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=19.894;DP=700;FS=3.227;HRun=2;HaplotypeScore=139.6149;InbreedingCoeff=0.9998;MQ=87.44;MQ0=0;MQRankSum=-6.202;QD=30.23;ReadPosRankSum=4.540;VQSLOD=4.5041;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,21:21:57.15:631,57,0	1/1:1,10:11:33.06:344,33,0	0/0:32,0:31:87.12:0,87,1332	0/0:28,0:28:78.26:0,78,1207	1/1:0,23:23:60.12:626,60,0	1/1:2,13:14:42.10:475,42,0	1/1:0,14:14:39.05:365,39,0	1/1:0,26:26:78.16:812,78,0	1/1:5,16:21:63.15:703,63,0	1/1:1,29:30:87.22:971,87,0	1/1:0,27:27:60.10:633,60,0	0/0:35,0:35:99:0,105,1672	0/0:36,0:36:99:0,108,1701	1/1:1,18:19:51.10:551,51,0	1/1:2,29:31:81.22:911,81,0	1/1:2,27:29:87.23:985,87,0	0/0:34,0:34:99:0,99,1553	0/0:21,0:20:51.10:0,51,730	0/0:23,0:23:69.24:0,69,1101	0/0:35,0:35:99:0,105,1649	0/0:37,0:37:99:0,108,1727	0/0:23,0:23:66.23:0,66,1055	0/0:30,0:30:87.30:0,87,1385	0/0:18,0:18:54.18:0,54,863	1/1:3,21:24:63.17:709,63,0	1/1:0,25:25:75.18:804,75,0	0/0:23,0:23:66.22:0,66,1047	1/1:1,8:9:27.07:306,27,0
chr10	52918455	.	C	CCT	4170.70	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=20.290;DP=708;FS=3.702;HRun=0;HaplotypeScore=175.2338;InbreedingCoeff=0.9996;MQ=87.30;MQ0=0;MQRankSum=-9.399;QD=12.52;ReadPosRankSum=4.283;VQSLOD=3.3196;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:22:52.06:283,52,0	1/1:11,0:11:28.94:135,29,0	0/0:33,0:32:87.29:0,87,1351	0/0:28,0:28:78.01:0,78,1135	1/1:23,0:23:51.61:263,52,0	1/1:15,0:14:36.67:185,37,0	1/1:14,0:14:30.24:99,30,0	1/1:26,0:26:67.74:375,68,0	1/1:23,0:23:62.36:445,62,0	1/1:31,0:31:79.17:423,79,0	1/1:28,0:28:49.03:215,49,0	0/0:36,0:36:99:0,105,1657	0/0:36,0:36:99:0,108,1710	1/1:18,1:19:43.26:204,43,0	1/1:30,2:33:74.52:378,75,0	1/1:28,1:29:77.63:366,78,0	0/0:34,0:34:99:0,99,1578	0/0:19,0:18:45.09:0,45,679	0/0:23,0:23:69.22:0,69,1095	0/0:36,0:36:99:0,105,1662	0/0:36,0:36:99:0,108,1751	0/0:23,0:23:66.23:0,66,1070	0/0:30,0:30:87.30:0,87,1411	0/0:18,0:18:54.18:0,54,875	1/1:21,3:24:57.50:303,57,0	1/1:26,0:26:66.54:318,67,0	0/0:23,0:23:66.23:0,66,1066	1/1:9,0:9:24.90:177,25,0
chr10	52918558	.	TC	T	14116.54	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=10.585;DP=669;FS=1.252;HRun=1;HaplotypeScore=66.5959;InbreedingCoeff=0.9959;MQ=79.50;MQ0=0;MQRankSum=-2.219;QD=38.46;ReadPosRankSum=0.857;VQSLOD=5.4015;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,19:19:51.17:712,51,0	1/1:0,14:14:39.13:545,39,0	0/0:23,1:24:57.21:0,57,1013	0/0:15,0:15:12.82:0,13,535	1/1:0,36:36:99:1510,108,0	1/1:0,18:18:48.16:671,48,0	1/1:0,22:22:54.18:755,54,0	1/1:0,36:36:99:1466,108,0	1/1:0,22:22:57.19:797,57,0	1/1:1,27:28:75.21:1012,75,0	1/1:0,36:36:99:1421,105,0	0/0:19,0:19:57.19:0,57,911	0/0:32,0:32:96.31:0,96,1509	1/1:0,28:28:81.27:1131,81,0	1/1:0,19:19:48.16:671,48,0	1/1:0,25:25:69.23:965,69,0	0/0:32,0:32:93.30:0,93,1455	0/0:23,0:23:60.16:0,60,930	0/0:21,0:21:63.21:0,63,1008	0/0:39,0:38:99:0,117,1847	0/0:8,0:8:24.08:0,24,381	0/0:29,0:29:87.29:0,87,1369	0/0:22,0:22:66.23:0,66,1052	0/0:9,0:9:27.09:0,27,432	1/1:0,29:29:75.25:1049,75,0	1/1:0,25:25:75.19:1008,75,0	0/0:29,0:29:87.28:0,87,1367	1/1:1,9:10:30.09:402,30,0
chr10	52922601	.	CATATATAT	C	2351.71	PASS	AC=8;AF=0.222;AN=36;BaseQRankSum=1.802;DP=214;FS=4.012;HRun=0;HaplotypeScore=63.4985;InbreedingCoeff=0.7138;MQ=83.45;MQ0=0;MQRankSum=-6.504;QD=34.08;ReadPosRankSum=1.690;VQSLOD=2.9704;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:14:27.08:0,27,644	0/0:3,0:5:6.02:0,6,115	./.	0/0:10,0:7:5.91:0,6,85	0/0:5,0:5:3.01:0,3,118	./.	./.	0/0:13,0:13:24.08:0,24,746	./.	./.	0/0:4,0:4:3.01:0,3,94	0/0:3,0:6:18.03:0,18,491	0/0:8,0:9:27.09:0,27,1070	0/0:1,0:1:3.01:0,3,116	./.	0/0:6,0:11:15.05:0,15,326	0/0:4,0:19:24.08:0,24,842	0/0:3,0:12:26.30:0,26,871	1/1:7,6:13:15.02:289,15,0	1/1:6,10:18:30.10:736,30,0	1/1:8,9:17:15.05:391,15,0	./.	0/0:6,0:6:6.02:0,6,219	0/0:3,0:3:3.01:0,3,126	./.	./.	1/1:3,17:21:42.14:1071,42,0	./.
chr10	52922949	.	A	AT	4647.12	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-13.774;DP=700;FS=3.547;HRun=0;HaplotypeScore=66.7911;InbreedingCoeff=0.9369;MQ=74.65;MQ0=0;MQRankSum=-3.082;QD=45.56;ReadPosRankSum=2.604;VQSLOD=4.9543;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,34:34:96.33:1533,96,0	1/1:0,5:5:15.05:240,15,0	0/0:16,0:16:26.86:0,27,291	0/0:9,0:8:1.46:0,1,89	0/0:29,0:29:87.28:0,87,1199	0/0:31,0:31:93.30:0,93,1284	0/0:15,0:15:45.14:0,45,612	0/0:40,0:40:99:0,105,1424	0/0:39,0:39:99:0,117,1621	0/0:30,0:30:87.24:0,87,1156	0/0:23,0:23:69.21:0,69,932	0/0:28,0:28:81.26:0,81,1117	0/0:41,0:41:99:0,123,1676	0/0:32,0:32:96.31:0,96,1327	1/1:0,32:32:96.33:1532,96,0	1/1:0,31:31:84.29:1342,84,0	0/0:15,0:15:36.11:0,36,487	0/0:18,0:18:51.17:0,51,712	0/0:18,0:18:51.16:0,51,694	0/0:19,0:19:57.18:0,57,781	0/0:29,0:29:84.26:0,84,1156	0/0:26,0:26:75.11:0,75,984	0/0:23,0:23:69.18:0,69,897	0/0:23,0:23:69.23:0,69,965	0/0:16,0:16:48.08:0,48,627	0/0:22,0:22:63.21:0,63,876	0/0:45,0:45:99:0,135,1835	0/0:11,0:11:33.11:0,33,461
chr10	52923667	.	A	AAGGAGCTCCCGGGATCGTGTCAT	61124.41	PASS	AB=0.864;AC=52;AF=0.929;AN=56;BaseQRankSum=-9.626;DP=460;FS=16.815;HRun=0;HaplotypeScore=546.9522;InbreedingCoeff=-0.0908;MQ=61.42;MQ0=0;MQRankSum=0.145;QD=132.88;ReadPosRankSum=1.617;VQSLOD=4.4005;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:14:8.85:1479,9,0	1/1:10,0:10:16.22:1823,16,0	0/1:7,1:12:94.35:1019,0,94	0/1:6,0:9:25.22:368,0,25	1/1:22,0:22:28.04:1602,28,0	0/1:18,0:18:20.37:2186,0,20	1/1:17,0:17:43.39:2157,43,0	1/1:22,0:22:57.65:3420,58,0	1/1:18,0:18:37.59:3345,38,0	1/1:22,0:22:43.37:3709,43,0	1/1:18,0:18:18.47:1884,18,0	1/1:30,0:30:70.15:4702,70,0	1/1:13,0:13:16.79:1784,17,0	1/1:15,0:15:12.82:1802,13,0	1/1:16,0:16:32.29:2263,32,0	1/1:30,0:30:58.05:5204,58,0	1/1:20,0:20:32.76:2339,33,0	1/1:4,0:4:9.03:516,9,0	1/1:5,0:5:15.05:751,15,0	1/1:25,0:25:31.61:3198,32,0	1/1:12,0:12:21.07:849,21,0	1/1:16,0:16:0.72:1043,1,0	1/1:13,0:13:6.16:1038,6,0	0/1:6,0:6:2.43:252,0,2	1/1:12,0:11:23.64:1924,24,0	1/1:26,0:26:48.72:4487,49,0	1/1:25,0:25:70.39:4279,70,0	1/1:10,0:10:24.62:1702,25,0
chr10	52924750	.	GTCATAGGATTCAAACACATAC	G	13385.08	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=14.246;DP=695;FS=9.215;HRun=0;HaplotypeScore=381.9433;InbreedingCoeff=0.9750;MQ=86.12;MQ0=0;MQRankSum=-12.918;QD=129.95;ReadPosRankSum=5.526;VQSLOD=3.8636;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,21:26:54.18:2855,54,0	1/1:3,14:17:39.13:2316,39,0	0/0:33,0:33:96.80:0,97,6345	0/0:23,0:23:54.18:0,54,3859	0/0:18,0:18:54.19:0,54,5240	0/0:19,0:19:57.20:0,57,5126	0/0:24,0:24:72.23:0,72,5473	0/0:25,0:25:72.24:0,72,5770	0/0:26,0:26:78.27:0,78,7390	0/0:24,0:24:72.25:0,72,5655	0/0:24,0:24:69.24:0,69,6481	0/0:29,0:29:87.30:0,87,8295	0/0:26,0:26:75.26:0,75,6663	0/0:20,0:20:57.18:0,57,4326	1/1:4,22:26:63.22:3747,63,0	1/1:4,30:34:75.26:4466,75,0	0/0:33,0:33:99:0,99,8995	0/0:22,0:22:66.23:0,66,6366	0/0:26,0:26:78.27:0,78,4953	0/0:25,0:25:75.26:0,75,6548	0/0:28,0:28:84.29:0,84,7892	0/0:23,0:23:69.24:0,69,5471	0/0:29,0:29:87.30:0,87,7792	0/0:34,0:33:99:0,102,8346	0/0:18,0:18:54.19:0,54,4438	0/0:28,0:28:6.99:0,7,6384	0/0:28,0:28:84.29:0,84,7904	0/0:7,0:7:21.07:0,21,1686
chr10	52924872	.	GCAGGCACATATGCACCCACA	G	18472.56	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=17.307;DP=686;FS=2.048;HRun=0;HaplotypeScore=364.2681;InbreedingCoeff=0.9510;MQ=80.06;MQ0=0;MQRankSum=-11.704;QD=76.02;ReadPosRankSum=2.562;VQSLOD=3.4748;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,141,11681	0/0:12,0:12:30.10:0,30,2085	0/0:29,0:29:69.27:0,69,4603	0/0:31,0:31:78.23:0,78,4259	1/1:4,20:24:27.09:1163,27,0	1/1:3,15:18:27.09:1415,27,0	1/1:3,21:24:30.10:1652,30,0	1/1:5,23:28:69:1180,69,0	1/1:3,16:19:32.65:1815,33,0	1/1:2,12:14:33.11:1252,33,0	1/1:0,11:11:24.08:1140,24,0	0/0:31,0:31:87.28:0,87,7142	0/0:33,0:33:75.26:0,75,5964	1/1:4,25:29:54.19:2971,54,0	0/0:32,0:32:90.28:0,90,7360	0/0:27,0:27:66.20:0,66,4826	1/1:3,10:13:24.08:1052,24,0	1/1:5,16:21:3.12:1136,3,0	0/0:17,0:17:42.11:0,42,2673	0/0:28,0:28:72.21:0,72,5176	0/0:57,0:57:99:0,154,13076	0/0:20,0:20:54.17:0,54,4538	0/0:23,0:23:63.19:0,63,4812	0/0:35,0:35:93.32:0,93,7743	1/1:4,14:18:24.08:1251,24,0	1/1:3,19:22:51.12:2282,51,0	0/0:16,0:16:36.11:0,36,3002	1/1:0,2:2:3.01:165,3,0
chr10	52925728	.	GT	G	7774.62	PASS	AB=0.895;AC=43;AF=0.768;AN=56;BaseQRankSum=4.491;DP=597;FS=13.345;HRun=12;HaplotypeScore=68.3312;InbreedingCoeff=0.9222;MQ=74.59;MQ0=0;MQRankSum=0.095;QD=16.26;ReadPosRankSum=2.831;VQSLOD=5.0209;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,17:23:47.78:371,48,0	1/1:1,5:7:16.98:122,17,0	0/0:18,0:18:29.46:0,29,224	0/0:21,0:20:33.66:0,34,296	1/1:4,17:21:23.35:364,23,0	1/1:6,21:27:29.15:411,29,0	1/1:4,21:25:59.76:464,60,0	1/1:15,26:43:56.85:552,57,0	1/1:2,16:18:41.69:325,42,0	1/1:4,18:22:30.92:392,31,0	1/1:6,14:21:46.85:353,47,0	0/1:14,2:17:4.66:5,0,285	0/0:22,1:23:39.96:0,40,580	1/1:4,21:25:56.76:441,57,0	1/1:0,24:24:65.75:511,66,0	1/1:3,17:20:50.78:395,51,0	1/1:5,14:19:38.82:302,39,0	1/1:6,15:22:40.87:308,41,0	1/1:4,16:22:21.40:326,21,0	1/1:3,20:23:56.75:441,57,0	1/1:1,15:16:44.83:348,45,0	0/0:19,0:21:59.15:0,59,553	0/0:19,0:19:48.09:0,48,482	0/0:16,0:16:42.06:0,42,426	1/1:5,14:19:32.83:251,33,0	1/1:5,18:25:60.76:443,61,0	1/1:7,24:30:63.21:488,63,0	1/1:0,8:8:20.92:163,21,0
chr10	52929984	.	CTGTGTG	C	1228.73	PASS	AB=1.000;AC=24;AF=0.462;AN=52;BaseQRankSum=-2.915;DP=520;FS=4.207;HRun=0;HaplotypeScore=111.8891;InbreedingCoeff=0.2764;MQ=42.52;MQ0=73;MQRankSum=1.128;QD=3.69;ReadPosRankSum=-1.409;VQSLOD=1.9223;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:27:7.10:7,0,60	0/1:9,0:7:7.70:8,0,15	./.	./.	0/0:9,0:7:6.02:0,6,97	0/1:19,0:17:0.05:133,0,0	1/1:42,0:40:32.76:462,33,0	0/0:22,0:18:0:0,0,0	1/1:13,0:10:5.22:41,5,0	1/1:9,7:13:18.51:222,19,0	1/1:8,0:7:3.01:35,3,0	0/0:20,0:18:10.87:0,11,120	0/1:14,0:9:1.98:2,0,67	0/0:19,0:15:1.95:0,2,6	0/0:25,0:21:3.43:0,3,82	0/0:17,0:15:14.23:0,14,263	1/1:31,0:25:12.01:43,12,0	1/1:19,0:13:4.31:24,4,0	0/1:17,0:14:0:1,0,0	0/0:10,0:8:2.99:0,3,25	0/1:48,0:37:29.42:29,0,33	0/0:15,0:10:5.99:0,6,119	0/0:9,0:9:8.35:0,8,65	0/0:40,0:39:32.50:0,32,352	1/1:12,0:9:8.91:116,9,0	0/1:22,0:15:12.79:169,0,13	1/1:16,0:10:1.29:4,1,0	0/1:17,0:12:17.96:88,0,18
chr10	52930069	.	AT	A	2189.31	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=5.701;DP=523;FS=5.373;HRun=9;HaplotypeScore=68.9596;InbreedingCoeff=0.9752;MQ=78.98;MQ0=0;MQRankSum=1.249;QD=21.26;ReadPosRankSum=-0.091;VQSLOD=4.3923;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,1:31:26.29:0,26,797	0/0:10,0:10:27.08:0,27,312	0/0:25,0:26:21.86:0,22,457	0/0:19,0:17:33:0,33,347	0/0:21,0:21:57.16:0,57,646	0/0:22,0:22:63.17:0,63,718	0/0:24,0:24:69.20:0,69,796	0/0:30,0:30:72.21:0,72,823	0/0:13,0:13:39.12:0,39,450	0/0:23,0:23:64.43:0,64,730	0/0:7,0:7:21.06:0,21,242	0/0:17,0:17:48.14:0,48,554	0/0:14,0:14:39.12:0,39,450	0/0:15,1:16:20.63:0,21,477	0/0:11,0:11:33.10:0,33,381	0/0:16,0:16:42.10:0,42,464	1/1:1,16:17:36.02:329,36,0	1/1:0,15:15:42.02:384,42,0	1/1:3,16:19:48.01:434,48,0	1/1:3,24:27:74.97:680,75,0	1/1:2,10:12:27.01:247,27,0	0/0:19,0:19:53.18:0,53,585	0/0:24,0:24:69.18:0,69,783	0/0:22,0:22:56.90:0,57,632	0/0:26,0:26:71.86:0,72,789	0/0:18,0:18:48.14:0,48,553	1/1:1,12:13:33.01:302,33,0	0/0:11,0:11:5.87:0,6,302
chr10	52930513	.	T	TTGATAAAGGACTTGATAAA	15476.56	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-1.776;DP=801;FS=1.583;HRun=0;HaplotypeScore=359.9418;InbreedingCoeff=0.9792;MQ=87.99;MQ0=0;MQRankSum=-13.110;QD=143.30;ReadPosRankSum=2.799;VQSLOD=3.9904;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,23:43:66.23:5245,66,0	1/1:1,3:5:9.03:681,9,0	0/0:36,0:36:99:0,105,3809	0/0:29,0:29:74.92:0,75,2477	0/0:37,0:37:99:0,108,5220	0/0:25,0:25:75.26:0,75,3677	0/0:25,0:25:75.24:0,75,3606	0/0:42,0:42:99:0,123,4911	0/0:29,0:29:84.29:0,84,4157	0/0:37,0:37:99:0,102,5134	0/0:22,0:22:66.23:0,66,3190	0/0:35,0:35:99:0,105,5250	0/0:30,0:30:90.28:0,90,4453	0/0:24,0:24:66.22:0,66,3405	1/1:10,18:36:66.23:5715,66,0	1/1:9,14:24:51.18:3835,51,0	0/0:32,0:32:93.31:0,93,4625	0/0:31,0:31:93.31:0,93,4416	0/0:20,0:20:60.21:0,60,3125	0/0:24,0:24:66.23:0,66,3403	0/0:24,0:24:66.21:0,66,3048	0/0:27,0:27:78.27:0,78,3581	0/0:19,0:19:54.18:0,54,2703	0/0:41,0:41:99:0,120,6188	0/0:33,0:33:93.31:0,93,4431	0/0:34,0:34:96.31:0,96,4640	0/0:32,0:32:93.30:0,93,4519	0/0:5,0:5:15.05:0,15,813
chr10	52930665	.	GATAGATAA	G	1204.34	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=10.458;DP=696;FS=0.000;HRun=0;HaplotypeScore=183.6010;InbreedingCoeff=0.6789;MQ=59.88;MQ0=20;MQRankSum=-6.916;QD=8.08;ReadPosRankSum=-1.654;VQSLOD=2.0805;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:27:29.85:340,30,0	1/1:2,7:9:11.92:157,12,0	0/0:23,0:17:26.20:0,26,302	0/1:19,0:14:0.25:0,0,188	0/0:23,0:23:62.69:0,63,1390	0/0:33,0:33:89.74:0,90,1567	0/0:26,0:26:69.07:0,69,1134	0/0:44,0:34:83.85:0,84,744	0/1:25,0:24:13.68:14,0,523	0/0:24,0:23:60.12:0,60,1116	0/0:30,0:30:80.76:0,81,1458	0/0:30,0:30:81.01:0,81,1593	0/0:29,0:29:83.69:0,84,1592	0/0:28,0:28:64.83:0,65,1692	1/1:29,0:29:63.23:441,63,0	1/1:19,0:19:44.42:341,44,0	0/1:20,0:20:76.17:76,0,278	0/0:13,0:12:14.91:0,15,113	0/0:20,0:18:50.81:0,51,959	0/0:36,0:34:80.08:0,80,1794	0/0:26,0:26:75.14:0,75,1795	0/0:27,0:27:57:0,57,573	0/0:29,0:29:74.91:0,75,1514	0/0:21,0:21:39.06:0,39,414	0/0:35,0:35:98.98:0,99,2280	0/0:19,0:19:50.82:0,51,1119	0/0:26,0:26:45:0,45,443	0/0:4,0:4:6.02:0,6,259
chr10	52930673	.	AATAG	A	895.34	PASS	AB=0.848;AC=12;AF=0.240;AN=50;BaseQRankSum=6.892;DP=680;FS=6.101;HRun=0;HaplotypeScore=133.0354;InbreedingCoeff=0.6194;MQ=52.29;MQ0=24;MQRankSum=-0.161;QD=5.89;ReadPosRankSum=0.625;VQSLOD=1.8286;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:23:3.90:10,4,0	1/1:7,0:7:3.47:26,3,0	./.	./.	0/0:25,0:24:36.08:0,36,685	0/0:32,0:32:36.12:0,36,753	0/0:24,0:24:21.03:0,21,395	0/0:41,0:29:5.94:0,6,41	0/1:16,0:28:15.04:15,0,106	0/0:12,0:24:37.47:0,37,443	0/0:28,0:28:45.08:0,45,794	0/0:27,0:27:42.12:0,42,784	0/0:33,0:33:9.19:0,9,853	0/0:28,0:28:0.15:0,0,824	0/0:27,0:27:1.58:0,2,3	0/0:20,0:20:0.40:0,0,1	0/1:13,0:23:1.63:47,0,2	./.	0/0:20,0:17:24.08:0,24,497	0/0:36,0:34:41.56:0,42,813	0/0:25,0:25:45.14:0,45,913	1/1:10,17:27:29.80:376,30,0	0/0:30,0:29:51.17:0,51,952	1/1:9,10:19:15:204,15,0	0/0:38,0:38:57.14:0,57,1173	0/0:18,0:20:14.74:0,15,588	1/1:9,14:23:24.08:370,24,0	0/0:2,0:2:6.02:0,6,140
chr10	52932550	.	G	GA	7291.02	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-13.593;DP=676;FS=1.760;HRun=8;HaplotypeScore=59.4732;InbreedingCoeff=0.9969;MQ=74.21;MQ0=0;MQRankSum=-2.958;QD=28.37;ReadPosRankSum=1.451;VQSLOD=5.3913;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,34:39:93.28:1073,93,0	1/1:1,8:9:15:158,15,0	0/0:18,0:16:26.21:0,26,257	0/0:17,0:16:30.01:0,30,273	0/0:24,0:24:69.03:0,69,628	0/0:29,0:29:78.04:0,78,714	0/0:20,0:20:54.02:0,54,494	0/0:31,0:31:78.01:0,78,707	0/0:14,0:14:39.02:0,39,357	0/0:39,0:39:99:0,114,1028	0/0:16,0:16:45.02:0,45,411	0/0:22,0:22:54:0,54,490	0/0:39,0:39:99:0,111,1009	0/0:26,0:26:72.02:0,72,654	1/1:4,23:27:60.18:692,60,0	1/1:3,21:24:57.17:658,57,0	1/1:4,19:23:54.16:623,54,0	1/1:0,14:14:42.12:484,42,0	1/1:3,32:35:96.23:1080,96,0	1/1:0,24:23:69.20:794,69,0	1/1:2,22:24:57.17:658,57,0	0/0:34,0:34:92.94:0,93,830	0/0:18,0:18:48.02:0,48,439	0/0:10,0:10:27:0,27,241	0/0:26,0:26:66.02:0,66,604	0/0:28,0:28:72.01:0,72,655	1/1:4,33:36:93.27:1070,93,0	0/0:8,0:8:24.01:0,24,220
chr10	52933906	.	CTCT	C	18997.94	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=21.408;DP=747;FS=0.870;HRun=0;HaplotypeScore=152.4196;InbreedingCoeff=0.9978;MQ=82.37;MQ0=0;MQRankSum=-7.009;QD=45.02;ReadPosRankSum=1.746;VQSLOD=6.4586;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,56:56:99:2571,156,0	1/1:0,15:15:45.11:760,45,0	0/0:22,0:22:60.20:0,60,1310	0/0:24,0:24:66.23:0,66,1504	1/1:2,34:37:87.25:1500,87,0	1/1:1,17:18:45.11:760,45,0	1/1:1,27:28:69.11:1118,69,0	1/1:2,32:34:96.31:1655,96,0	1/1:2,18:20:48.16:846,48,0	1/1:1,25:26:75.26:1323,75,0	1/1:1,21:22:57.20:1005,57,0	0/0:22,0:22:60.21:0,60,1393	0/0:21,0:21:63.22:0,63,1490	1/1:0,30:30:75.17:1255,75,0	1/1:1,41:42:99:2030,117,0	1/1:1,24:25:63.17:1078,63,0	0/0:26,0:26:78.23:0,78,1792	0/0:27,0:27:78.27:0,78,1813	0/0:19,0:19:54.19:0,54,1279	0/0:25,0:25:75.26:0,75,1769	0/0:36,0:36:99:0,108,2529	0/0:16,0:16:48.16:0,48,1127	0/0:29,0:29:81.25:0,81,1822	0/0:21,0:21:63.22:0,63,1464	1/1:1,29:30:84.11:1332,84,0	1/1:2,30:32:90.25:1499,90,0	0/0:37,0:36:99:0,111,2530	1/1:0,7:7:15.05:265,15,0
chr10	52934322	.	T	TG	7508.72	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=12.179;DP=710;FS=0.000;HRun=6;HaplotypeScore=110.3383;InbreedingCoeff=0.9981;MQ=83.49;MQ0=0;MQRankSum=-2.316;QD=29.68;ReadPosRankSum=-1.063;VQSLOD=3.6994;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:83.80:0,84,449	0/0:18,0:18:18.46:0,18,142	0/0:26,0:26:56.28:0,56,584	0/0:19,0:19:33.84:0,34,373	1/1:8,26:34:90.27:1104,90,0	1/1:1,22:23:54.17:669,54,0	1/1:4,28:32:78.25:971,78,0	1/1:10,11:21:39.05:437,39,0	1/1:1,20:21:60.19:741,60,0	1/1:5,17:22:54.12:634,54,0	1/1:3,17:20:37.62:545,38,0	0/0:19,0:19:57.09:0,57,568	0/0:24,0:24:69.16:0,69,704	1/1:4,17:21:45.14:558,45,0	0/0:28,0:28:44:0,44,277	0/0:25,1:26:25.46:0,25,236	0/0:20,0:20:54.09:0,54,543	0/0:27,0:27:78.10:0,78,775	0/0:21,0:21:54.11:0,54,545	0/0:34,0:34:96.21:0,96,973	0/0:35,0:35:99:0,99,1001	0/0:33,0:33:90.18:0,90,907	0/0:25,0:25:66.14:0,66,671	0/0:26,0:25:69.14:0,69,696	1/1:2,18:20:51.16:635,51,0	1/1:5,27:32:78.21:953,78,0	0/0:33,0:32:96.20:0,96,967	1/1:0,7:7:21.07:262,21,0
chr10	52938509	.	G	GCACC	3512.43	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-9.881;DP=772;FS=0.571;HRun=0;HaplotypeScore=122.7842;InbreedingCoeff=0.9991;MQ=79.35;MQ0=0;MQRankSum=-4.042;QD=74.73;ReadPosRankSum=2.231;VQSLOD=5.7327;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,114,2097	0/0:11,0:11:27.06:0,27,470	0/0:26,0:26:63.15:0,63,1016	0/0:21,0:21:36.02:0,36,510	0/0:30,0:30:87.30:0,87,1613	0/0:28,0:28:81.28:0,81,1506	0/0:26,0:26:72.25:0,72,1326	0/0:27,0:27:72.23:0,72,1265	0/0:28,0:28:78.22:0,78,1402	0/0:29,0:29:87.29:0,87,1578	0/0:18,0:18:54.19:0,54,1008	0/0:35,0:35:99:0,102,1797	0/0:37,0:37:99:0,105,1926	0/0:34,0:34:99:0,102,1836	0/0:29,0:29:87.30:0,87,1619	0/0:32,0:32:93.31:0,93,1705	1/1:4,29:33:90.31:2401,90,0	1/1:1,13:14:42.14:1112,42,0	0/0:24,0:24:69.24:0,69,1288	0/0:26,0:26:69.22:0,69,1244	0/0:29,0:29:72.25:0,72,1306	0/0:19,0:19:54.19:0,54,1008	0/0:28,0:28:81.28:0,81,1492	0/0:32,0:32:96.31:0,96,1759	0/0:35,0:34:99:0,102,1882	0/0:29,0:29:84.28:0,84,1537	0/0:40,0:40:99:0,117,2170	0/0:10,0:10:30.10:0,30,560
chr10	52939318	.	T	TA	8497.86	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=14.274;DP=449;FS=33.210;HRun=1;HaplotypeScore=234.6421;InbreedingCoeff=0.9543;MQ=74.78;MQ0=0;MQRankSum=-14.190;QD=27.15;ReadPosRankSum=2.077;VQSLOD=0.7628;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,11:14:35.45:338,35,0	1/1:4,3:7:18.02:172,18,0	0/0:16,0:16:42.08:0,42,482	0/0:14,0:14:39.13:0,39,501	1/1:9,16:25:64.58:604,65,0	1/1:6,15:21:60.06:611,60,0	1/1:5,3:8:23.87:231,24,0	1/1:22,1:22:66.15:709,66,0	1/1:6,2:8:21.02:195,21,0	1/1:11,11:22:63.15:680,63,0	1/1:4,13:17:50.07:458,50,0	0/0:26,0:26:78.23:0,78,985	0/0:29,0:29:87.23:0,87,1085	1/1:3,7:10:29.96:278,30,0	1/1:6,14:20:44.32:437,44,0	1/1:13,14:26:67.70:676,68,0	1/1:0,4:4:11.70:101,12,0	1/1:2,0:2:3:27,3,0	1/1:6,6:12:36.09:403,36,0	1/1:10,11:21:53.46:540,53,0	1/1:4,1:5:11.73:90,12,0	0/0:17,0:17:51.17:0,51,662	0/0:16,0:16:45.11:0,45,543	0/0:18,0:18:54.17:0,54,696	1/1:8,15:23:62.43:627,62,0	1/1:5,12:17:48.12:526,48,0	1/1:5,13:18:50.95:490,51,0	1/1:3,6:9:27.07:303,27,0
chr10	52939321	.	T	TTTC	7808.41	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=14.846;DP=340;FS=12.700;HRun=0;HaplotypeScore=169.6463;InbreedingCoeff=0.9010;MQ=85.80;MQ0=0;MQRankSum=-14.056;QD=39.64;ReadPosRankSum=4.136;VQSLOD=5.5659;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,10:11:29.88:372,30,0	1/1:0,3:3:9.03:131,9,0	0/0:17,0:17:45.07:0,45,675	0/0:15,0:15:42.14:0,42,739	1/1:1,15:16:48.07:627,48,0	1/1:3,13:16:48.12:699,48,0	1/1:0,3:4:12.03:156,12,0	1/1:1,1:3:9.01:98,9,0	1/1:0,2:2:6.02:86,6,0	1/1:3,11:14:39.11:564,39,0	1/1:0,13:13:39.06:527,39,0	0/0:26,0:26:78.23:0,78,1380	0/0:30,0:30:87.30:0,87,1593	1/1:1,6:7:21.07:297,21,0	1/1:3,12:15:39.01:518,39,0	1/1:2,13:14:42.09:554,42,0	1/1:0,4:4:12.04:170,12,0	1/1:1,0:1:3:25,3,0	1/1:2,6:8:24.02:324,24,0	1/1:1,11:12:30.10:435,30,0	1/1:1,1:3:6.01:68,6,0	0/0:21,0:21:57.17:0,57,1003	0/0:14,0:14:39.13:0,39,715	0/0:20,0:20:54.14:0,54,967	1/1:1,14:15:45.15:672,45,0	1/1:2,11:13:36.04:536,36,0	1/1:1,12:13:36.12:534,36,0	1/1:3,6:9:27.05:415,27,0
chr10	52939323	.	T	TCAACTTC	18734.55	PASS	AC=40;AF=0.741;AN=54;BaseQRankSum=15.026;DP=342;FS=18.029;HRun=0;HaplotypeScore=159.4475;InbreedingCoeff=0.9040;MQ=84.66;MQ0=0;MQRankSum=-13.365;QD=92.75;ReadPosRankSum=4.871;VQSLOD=4.9292;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,10:11:30.10:1040,30,0	1/1:0,3:3:9.03:338,9,0	0/0:16,0:16:45.14:0,45,1009	0/0:15,0:15:45.15:0,45,1158	1/1:2,15:18:48.99:1622,49,0	1/1:1,13:16:45.12:1592,45,0	1/1:1,3:4:9:339,9,0	1/1:3,1:4:5.98:141,6,0	1/1:0,2:2:6.02:224,6,0	1/1:2,11:13:33.09:1246,33,0	1/1:0,13:13:39.13:1459,39,0	0/0:23,0:23:69.24:0,69,1929	0/0:31,0:31:87.30:0,87,2341	1/1:0,6:7:21.07:777,21,0	1/1:2,12:16:35.75:1254,36,0	1/1:1,13:14:37.64:1361,38,0	1/1:0,4:4:12.04:449,12,0	./.	1/1:1,6:7:21.07:778,21,0	1/1:1,11:12:30.10:1127,30,0	1/1:3,1:4:2.97:112,3,0	0/0:21,0:21:57.20:0,57,1538	0/0:15,0:15:42.14:0,42,1132	0/0:19,0:19:51.18:0,51,1412	1/1:1,14:16:45.15:1615,45,0	1/1:2,11:14:36.75:1172,37,0	1/1:2,12:15:37.94:1341,38,0	1/1:2,6:8:24.08:748,24,0
chr10	52939324	.	ATG	A	3104.54	PASS	AC=40;AF=0.741;AN=54;BaseQRankSum=14.622;DP=341;FS=17.810;HRun=0;HaplotypeScore=189.6161;InbreedingCoeff=0.9283;MQ=83.74;MQ0=0;MQRankSum=-13.495;QD=15.45;ReadPosRankSum=3.887;VQSLOD=2.2245;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:11:21.57:141,22,0	1/1:3,0:3:8.79:52,9,0	0/0:15,0:15:27.96:0,28,698	0/0:15,0:15:45.14:0,45,826	1/1:18,1:19:40.31:303,40,0	1/1:15,0:16:43.35:241,43,0	1/1:4,0:4:8.49:43,8,0	1/1:4,0:4:8.95:76,9,0	1/1:2,0:2:5.85:33,6,0	1/1:11,1:12:34.64:218,35,0	1/1:13,0:13:37.72:222,38,0	0/0:24,0:24:69.24:0,69,1400	0/0:31,0:31:87.27:0,87,1681	1/1:7,0:7:20.19:111,20,0	1/1:14,1:15:36.10:245,36,0	1/1:15,0:14:37.92:254,38,0	1/1:4,0:4:11.71:76,12,0	./.	1/1:7,0:7:20.72:142,21,0	1/1:11,1:12:32.08:201,32,0	1/1:2,2:4:8.95:75,9,0	0/0:21,0:21:57.20:0,57,1152	0/0:15,0:15:45.12:0,45,860	0/0:19,0:19:51.18:0,51,1025	1/1:15,1:16:45.12:271,45,0	1/1:12,2:14:36.58:235,37,0	1/1:15,0:15:39.07:232,39,0	1/1:8,0:8:23.05:132,23,0
chr10	52939375	.	T	TC	10969.79	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=2.047;DP=586;FS=2.039;HRun=6;HaplotypeScore=181.0740;InbreedingCoeff=0.9765;MQ=52.59;MQ0=9;MQRankSum=-6.270;QD=27.09;ReadPosRankSum=0.264;VQSLOD=2.4133;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,15:22:39.09:490,39,0	1/1:5,3:7:8.78:111,9,0	0/0:36,0:24:57.08:0,57,563	0/0:22,0:21:42.88:0,43,402	1/1:11,17:29:54.07:661,54,0	1/1:5,18:23:54.09:642,54,0	1/1:1,17:18:45.10:548,45,0	1/1:8,11:19:30.05:347,30,0	1/1:2,14:16:48.11:584,48,0	1/1:5,14:18:42.13:527,42,0	1/1:9,7:16:21.05:241,21,0	0/0:24,0:24:48.09:0,48,486	0/0:22,0:22:45.10:0,45,459	1/1:4,11:15:33.11:415,33,0	1/1:5,24:29:78.16:960,78,0	1/1:3,16:18:51.15:627,51,0	1/1:2,6:7:14.55:187,15,0	1/1:0,5:5:15.05:188,15,0	1/1:2,15:16:42.11:513,42,0	1/1:5,28:33:72.23:909,72,0	1/1:0,21:21:54.14:679,54,0	0/0:25,0:25:57.12:0,57,580	0/0:23,0:23:57.12:0,57,581	0/0:27,0:27:57.12:0,57,581	1/1:13,19:32:60.02:682,60,0	1/1:3,20:23:57.18:716,57,0	1/1:5,22:27:63.20:792,63,0	1/1:0,5:5:12.04:151,12,0
chr10	52939388	.	TCACA	T	3466.77	PASS	AB=1.000;AC=27;AF=0.500;AN=54;BaseQRankSum=0.717;DP=539;FS=10.167;HRun=0;HaplotypeScore=180.6902;InbreedingCoeff=-0.1628;MQ=48.88;MQ0=11;MQRankSum=-1.526;QD=8.39;ReadPosRankSum=-4.056;VQSLOD=1.1018;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:23:42.36:158,0,42	0/1:7,0:6:22.90:23,0,65	./.	0/0:17,0:14:3.01:0,3,55	0/1:26,0:26:5.43:5,0,235	0/1:20,0:20:76.87:87,0,77	0/0:15,0:15:29.94:0,30,343	0/0:12,0:12:13.64:0,14,93	0/1:17,0:17:88.39:149,0,88	0/1:18,0:17:22.21:22,0,273	0/1:12,0:12:35.35:35,0,46	1/1:7,18:25:39.13:613,39,0	1/1:9,12:24:14.48:311,14,0	1/1:15,0:15:11.87:125,12,0	0/0:30,0:30:20.74:0,21,147	0/0:23,0:22:1.47:0,1,134	0/1:9,0:7:14.47:22,0,14	0/1:5,0:5:18.07:18,0,35	0/1:15,0:14:9.34:38,0,9	0/1:28,0:28:10.94:180,0,11	0/1:22,0:21:15.39:16,0,15	1/1:10,11:22:29.78:420,30,0	1/1:12,11:24:13.06:523,13,0	1/1:11,20:31:27.09:432,27,0	0/1:23,0:23:91.53:113,0,92	0/1:19,0:19:32.19:32,0,148	0/1:26,0:26:11.75:144,0,12	0/0:5,0:5:3.37:0,3,18
chr10	52939411	.	CACACACACACAA	C	6255.61	PASS	AB=1.000;AC=30;AF=0.536;AN=56;BaseQRankSum=-5.455;DP=620;FS=0.840;HRun=0;HaplotypeScore=255.2318;InbreedingCoeff=0.3340;MQ=45.79;MQ0=14;MQRankSum=-2.082;QD=14.79;ReadPosRankSum=-4.324;VQSLOD=2.9275;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:32,0:30:5.33:5,0,712	0/1:9,0:8:30.91:31,0,303	0/0:25,0:9:20.50:0,21,278	0/1:30,0:13:0.96:1,0,318	1/1:34,5:39:50.34:596,50,0	1/1:21,5:26:30:664,30,0	1/1:19,0:19:18:186,18,0	0/1:8,0:6:63.15:77,0,63	1/1:12,6:18:32.32:881,32,0	1/1:22,2:23:44.94:624,45,0	1/1:13,3:16:20.12:350,20,0	0/0:26,0:26:53.93:0,54,1329	0/0:25,0:25:41.09:0,41,881	1/1:9,6:15:20.54:626,21,0	0/0:27,0:26:17.37:0,17,831	0/1:25,0:24:32.82:33,0,613	0/1:12,0:10:4.32:122,0,4	0/1:12,0:12:27.97:221,0,28	0/0:14,0:12:15.50:0,16,164	0/1:29,0:29:27.58:28,0,372	0/1:29,0:28:57.51:58,0,247	0/0:20,0:20:39.06:0,39,831	0/0:28,0:28:69.03:0,69,1471	0/0:32,0:32:45.54:0,46,1140	1/1:23,6:28:51.12:1081,51,0	1/1:19,2:21:41.60:533,42,0	0/1:22,0:22:48.86:49,0,445	1/1:8,0:8:7.34:91,7,0
chr10	52939417	.	CACACAA	C	5790.62	PASS	AB=0.992;AC=33;AF=0.589;AN=56;BaseQRankSum=-3.287;DP=621;FS=0.384;HRun=0;HaplotypeScore=198.5324;InbreedingCoeff=0.0413;MQ=46.37;MQ0=17;MQRankSum=-2.349;QD=12.06;ReadPosRankSum=-2.557;VQSLOD=3.4646;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:32,1:31:15.59:213,16,0	0/1:8,1:8:54.87:96,0,55	0/0:28,0:11:32.31:0,32,292	0/0:28,0:11:2.01:0,2,276	0/1:37,0:37:81.51:282,0,82	1/1:25,0:25:32.98:356,33,0	0/1:24,0:24:88.94:135,0,89	0/1:12,0:10:40.75:101,0,41	0/1:18,0:18:20.97:319,0,21	0/1:23,0:22:49.60:266,0,50	1/1:16,0:16:11.36:192,11,0	0/0:26,0:26:45.37:0,45,278	0/1:23,0:23:39.10:39,0,250	1/1:15,0:15:25.16:305,25,0	0/1:27,0:26:90.59:91,0,150	0/1:25,0:24:75.37:75,0,135	0/1:12,0:10:26.81:84,0,27	0/1:11,0:11:25.67:157,0,26	1/1:12,1:9:18.31:253,18,0	1/1:16,10:26:54.08:871,54,0	1/1:27,2:28:53.70:482,54,0	0/1:22,0:22:0.30:0,0,169	0/0:28,0:28:47.35:0,47,448	0/0:31,0:31:40.34:0,40,260	1/1:32,0:31:3.49:476,3,0	0/1:20,0:20:1.50:292,0,1	1/1:19,2:21:53.62:639,54,0	1/1:7,0:7:8.18:67,8,0
chr10	52939419	.	CACAA	C	6523.73	PASS	AB=1.000;AC=39;AF=0.696;AN=56;BaseQRankSum=1.746;DP=628;FS=10.054;HRun=0;HaplotypeScore=178.3940;InbreedingCoeff=-0.0921;MQ=47.14;MQ0=15;MQRankSum=0.031;QD=11.55;ReadPosRankSum=5.566;VQSLOD=3.3319;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:26,5:30:33.99:513,34,0	0/1:9,0:8:28.64:128,0,29	0/0:31,0:14:41.27:0,41,341	0/0:32,0:15:13.86:0,14,339	0/1:37,0:37:45.54:283,0,46	1/1:23,0:23:32.95:287,33,0	0/1:24,0:24:84.77:156,0,85	0/1:14,0:12:9.53:150,0,10	0/1:20,0:20:5.10:264,0,5	0/1:23,0:22:62.86:250,0,63	1/1:17,0:17:2.47:177,2,0	0/1:26,0:26:99:336,0,122	0/1:23,0:23:99:135,0,169	1/1:14,0:14:23.42:231,23,0	1/1:28,0:27:16.16:215,16,0	1/1:24,1:24:18.20:161,18,0	0/1:11,0:10:6.19:71,0,6	1/1:11,0:11:3.98:149,4,0	1/1:12,0:8:16.68:144,17,0	1/1:25,0:25:51.40:533,51,0	1/1:29,0:28:53.74:428,54,0	0/1:20,0:20:99:203,0,101	0/1:29,0:29:99:227,0,260	0/1:32,0:32:99:167,0,128	1/1:30,0:30:35.18:424,35,0	1/1:22,0:22:10.20:339,10,0	1/1:21,1:22:53.87:511,54,0	0/1:7,0:7:0.12:40,0,0
chr10	52939421	.	CAA	C	5247.42	PASS	AB=1.000;AC=36;AF=0.643;AN=56;BaseQRankSum=-0.712;DP=620;FS=10.477;HRun=3;HaplotypeScore=161.9822;InbreedingCoeff=0.3081;MQ=47.19;MQ0=13;MQRankSum=-0.949;QD=11.61;ReadPosRankSum=0.902;VQSLOD=0.8547;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:28,1:28:50.20:369,50,0	1/1:9,1:9:0.45:121,0,0	0/0:32,0:15:44.28:0,44,370	0/0:32,0:16:9.81:0,10,297	0/1:37,0:37:66.04:278,0,66	1/1:22,0:22:32.25:217,32,0	0/1:23,0:23:79.58:156,0,80	1/1:17,0:15:19.27:229,19,0	0/1:19,0:19:5.24:167,0,5	0/1:21,0:21:75.78:241,0,76	1/1:17,0:17:4.99:172,5,0	0/1:26,0:26:6.25:6,0,181	0/0:23,1:24:19.74:0,20,236	1/1:12,1:13:3.46:138,3,0	1/1:20,8:27:50.77:507,51,0	1/1:19,8:26:35.94:408,36,0	0/1:10,0:10:6.26:57,0,6	1/1:11,0:11:28.39:183,28,0	1/1:10,1:7:17.89:133,18,0	1/1:24,0:24:41.64:392,42,0	1/1:29,0:28:53.76:424,54,0	0/0:18,2:20:1.81:0,2,194	0/0:28,0:28:6.47:0,6,329	0/0:31,0:32:36.64:0,37,254	1/1:31,0:30:3.78:317,4,0	0/1:20,0:20:0.28:276,0,0	1/1:19,1:20:53.66:418,54,0	0/1:7,0:7:11.40:38,0,11
chr10	52940574	.	A	ACC	13699.49	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=20.497;DP=723;FS=0.916;HRun=1;HaplotypeScore=114.9978;InbreedingCoeff=0.9985;MQ=85.22;MQ0=0;MQRankSum=-2.540;QD=51.12;ReadPosRankSum=5.505;VQSLOD=4.7886;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,53:55:99:2693,141,0	1/1:0,19:19:54.08:1013,54,0	0/0:30,0:30:90.29:0,90,1402	0/0:26,0:26:71.95:0,72,1086	0/0:24,0:24:69.24:0,69,1116	0/0:33,0:33:93.31:0,93,1493	0/0:17,0:17:51.14:0,51,781	0/0:37,0:37:99:0,105,1606	0/0:25,0:25:75.26:0,75,1220	0/0:24,0:24:69.24:0,69,1124	0/0:23,0:23:66.21:0,66,1052	0/0:28,0:28:81.26:0,81,1295	0/0:28,0:28:81.25:0,81,1271	0/0:28,0:28:84.29:0,84,1366	1/1:0,34:34:93.32:1768,93,0	1/1:0,24:24:69.24:1317,69,0	1/1:0,30:32:81.28:1546,81,0	1/1:0,9:9:24.01:422,24,0	1/1:1,18:19:54.18:1028,54,0	1/1:1,19:21:57.20:1097,57,0	1/1:0,31:31:81.28:1557,81,0	0/0:26,0:26:78.25:0,78,1247	0/0:23,0:23:69.22:0,69,1098	0/0:24,0:24:66.23:0,66,1075	0/0:23,0:23:69.22:0,69,1095	0/0:30,0:29:84.29:0,84,1368	1/1:1,23:24:66.23:1256,66,0	0/0:6,0:6:18.06:0,18,294
chr10	52942390	.	TC	T	4878.87	PASS	AB=1.000;AC=41;AF=0.732;AN=56;BaseQRankSum=17.184;DP=674;FS=32.866;HRun=2;HaplotypeScore=131.2312;InbreedingCoeff=0.8726;MQ=92.25;MQ0=0;MQRankSum=-5.613;QD=10.36;ReadPosRankSum=4.366;VQSLOD=1.1811;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:33,0:33:25.25:282,25,0	1/1:12,0:12:29.95:134,30,0	0/0:29,0:29:87.28:0,87,1231	0/0:30,0:30:83.77:0,84,1096	1/1:16,0:16:33.85:184,34,0	1/1:29,0:29:65.94:325,66,0	1/1:16,0:16:40.54:179,41,0	0/1:31,0:31:35.30:164,0,35	1/1:17,0:17:22.21:179,22,0	1/1:18,0:18:43.78:176,44,0	1/1:26,0:26:67.13:350,67,0	0/0:32,0:32:96.33:0,96,1436	0/0:30,0:30:90.27:0,90,1306	1/1:18,2:20:50.06:293,50,0	1/1:40,0:40:70.89:412,71,0	1/1:28,0:28:46.33:281,46,0	1/1:18,0:18:46.38:206,46,0	1/1:13,0:13:32.72:147,33,0	1/1:17,0:17:44.53:179,45,0	1/1:28,1:29:2.81:230,3,0	1/1:13,0:13:11.37:114,11,0	0/0:33,0:33:96.31:0,96,1418	0/0:33,0:33:96.30:0,96,1400	0/0:16,0:16:48.15:0,48,699	1/1:16,1:17:46.16:249,46,0	1/1:30,0:30:30.82:228,31,0	1/1:31,0:31:79.95:369,80,0	1/1:17,0:17:43.77:196,44,0
chr10	52942392	.	CA	C	15415.57	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=11.924;DP=720;FS=30.713;HRun=3;HaplotypeScore=103.9065;InbreedingCoeff=0.9976;MQ=92.24;MQ0=0;MQRankSum=-5.694;QD=30.29;ReadPosRankSum=3.110;VQSLOD=2.8453;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,32:34:75.23:929,75,0	1/1:0,11:11:33.10:409,33,0	0/0:30,0:30:90.24:0,90,1214	0/0:32,0:32:87.06:0,87,1136	1/1:2,20:22:16.17:439,16,0	1/1:0,28:28:72.23:891,72,0	1/1:0,19:19:45.14:558,45,0	1/1:2,27:29:78.22:941,78,0	1/1:0,17:17:48.15:595,48,0	1/1:3,18:21:33.19:611,33,0	1/1:10,24:34:75.22:917,75,0	0/0:32,0:32:96.31:0,96,1366	0/0:31,0:31:87.28:0,87,1217	1/1:2,21:23:54.16:653,54,0	1/1:0,39:39:99:1301,105,0	1/1:1,28:29:75.24:928,75,0	1/1:0,18:18:51.16:632,51,0	1/1:0,15:15:36.11:446,36,0	1/1:0,17:17:51.16:632,51,0	1/1:5,30:35:72.01:852,72,0	1/1:0,12:12:36.11:446,36,0	0/0:35,0:35:99:0,99,1389	0/0:34,0:34:96.31:0,96,1363	0/0:17,0:17:48.06:0,48,646	1/1:3,18:21:51.16:626,51,0	1/1:3,33:36:83.87:939,84,0	1/1:0,32:32:87.26:1077,87,0	1/1:0,17:17:48.15:595,48,0
chr10	52943099	.	C	CA	21097.14	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=12.489;DP=716;FS=13.482;HRun=2;HaplotypeScore=100.0413;InbreedingCoeff=0.9995;MQ=92.98;MQ0=0;MQRankSum=-7.972;QD=40.65;ReadPosRankSum=2.482;VQSLOD=3.2889;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,45:47:99:1978,132,0	1/1:1,10:11:30.03:423,30,0	0/0:31,0:31:87.26:0,87,1110	0/0:30,0:30:84.20:0,84,1038	1/1:0,19:19:54.18:809,54,0	1/1:0,23:23:66.22:989,66,0	1/1:0,21:21:54.18:809,54,0	1/1:2,35:37:99:1509,105,0	1/1:3,16:19:42.14:630,42,0	1/1:4,17:21:51.17:764,51,0	1/1:0,9:9:27.09:405,27,0	0/0:26,0:26:75.20:0,75,954	0/0:36,0:36:99:0,105,1360	1/1:1,22:23:63.21:938,63,0	1/1:0,36:36:96.33:1439,96,0	1/1:0,23:23:63.21:944,63,0	1/1:2,35:37:99:1522,102,0	1/1:1,9:10:27.09:404,27,0	1/1:0,21:21:63.14:896,63,0	1/1:1,21:22:60.20:899,60,0	1/1:1,34:35:96.33:1439,96,0	0/0:26,0:26:66.20:0,66,841	0/0:19,0:19:45.03:0,45,544	0/0:29,0:29:84.27:0,84,1090	1/1:4,32:36:93.27:1360,93,0	1/1:2,23:25:75.16:1052,75,0	1/1:0,32:32:90.25:1348,90,0	1/1:0,12:12:36.12:540,36,0
chr10	52943469	.	C	CG	23990.75	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=-3.428;DP=713;FS=9.165;HRun=0;HaplotypeScore=77.7619;InbreedingCoeff=0.9964;MQ=85.68;MQ0=0;MQRankSum=-4.218;QD=43.78;ReadPosRankSum=4.373;VQSLOD=4.9504;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,44:44:99:1820,114,0	1/1:0,8:8:21.07:336,21,0	0/0:24,0:24:66.19:0,66,888	0/0:22,0:22:48.15:0,48,715	1/1:1,18:19:51.17:810,51,0	1/1:1,18:19:54.18:863,54,0	1/1:0,28:28:72.25:1150,72,0	1/1:1,41:42:99:1936,123,0	1/1:0,26:26:72.25:1149,72,0	1/1:1,35:36:99:1669,105,0	1/1:0,23:23:69.24:1102,69,0	0/0:22,0:22:66.21:0,66,900	0/0:21,0:21:63.21:0,63,880	1/1:2,37:39:99:1629,102,0	1/1:1,47:48:99:2013,126,0	1/1:1,24:25:72.24:1140,72,0	1/1:0,21:21:60.20:940,60,0	1/1:0,14:14:39.13:620,39,0	1/1:0,19:19:57.19:909,57,0	1/1:0,27:27:72.25:1146,72,0	1/1:0,23:23:66.23:1054,66,0	0/0:34,0:34:99:0,102,1405	0/0:17,0:17:51.17:0,51,706	0/0:25,0:25:72.22:0,72,988	1/1:2,23:25:54.18:863,54,0	1/1:0,31:31:93.30:1452,93,0	1/1:0,26:26:72.10:1150,72,0	1/1:0,5:5:15.05:240,15,0
chr10	52947415	.	GGGGTGTGT	G	4324.35	PASS	AB=1.000;AC=25;AF=0.446;AN=56;BaseQRankSum=-1.875;DP=528;FS=11.077;HRun=0;HaplotypeScore=146.3025;InbreedingCoeff=-0.2584;MQ=65.81;MQ0=9;MQRankSum=-0.486;QD=12.18;ReadPosRankSum=-1.940;VQSLOD=3.1425;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:21,0:21:99:234,0,163	0/1:10,0:10:99:106,0,106	0/0:44,0:27:71.19:0,71,726	0/0:29,0:15:38.62:0,39,346	0/1:18,0:17:50.98:235,0,51	0/1:16,0:16:99:142,0,166	0/1:15,0:15:99:173,0,195	0/1:21,0:21:22.80:447,0,23	0/1:12,0:12:99:123,0,179	0/1:13,0:14:99:176,0,233	0/1:15,0:15:99:133,0,190	0/0:19,0:19:53.97:0,54,1092	0/0:16,0:15:44.57:0,45,864	0/1:25,0:25:99:172,0,159	0/1:18,0:18:65.48:198,0,65	0/1:17,0:17:99:139,0,194	0/1:29,0:28:99:379,0,259	0/1:18,0:18:99:208,0,104	1/1:14,0:14:41.73:351,42,0	1/1:1,11:12:2.95:19,3,0	1/1:16,0:15:32.98:342,33,0	0/0:23,0:22:55.49:0,55,1102	0/0:17,0:17:45.03:0,45,904	0/0:25,0:25:63.11:0,63,1096	0/1:20,0:20:99:164,0,365	0/1:18,0:17:99:210,0,289	1/1:1,16:17:14.72:328,15,0	0/1:7,0:7:44.84:45,0,310
chr10	52948118	.	GATGA	G	21725.11	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=19.688;DP=778;FS=8.635;HRun=0;HaplotypeScore=156.8712;InbreedingCoeff=0.9977;MQ=88.17;MQ0=0;MQRankSum=-14.721;QD=51.73;ReadPosRankSum=2.121;VQSLOD=5.8503;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,34:34:87.30:1663,87,0	1/1:0,23:23:63.22:1235,63,0	0/0:28,0:28:84.25:0,84,2089	0/0:36,0:36:99:0,99,2512	1/1:0,20:20:39.13:741,39,0	1/1:1,20:21:48.16:886,48,0	1/1:0,22:22:57.19:1093,57,0	1/1:1,30:31:90.27:1723,90,0	1/1:0,23:23:66.23:1314,66,0	1/1:0,27:26:78.27:1548,78,0	1/1:0,20:20:51.17:971,51,0	0/0:34,0:34:99:0,102,2768	0/0:37,0:37:99:0,108,2986	1/1:0,23:23:66.23:1310,66,0	1/1:1,40:41:99:2124,108,0	1/1:2,28:30:75.26:1494,75,0	1/1:0,17:17:48.16:958,48,0	1/1:0,18:18:54.18:1057,54,0	0/0:29,0:29:87.30:0,87,2394	0/0:29,0:29:87.30:0,87,2425	0/0:38,0:38:99:0,108,2986	0/0:38,0:38:99:0,114,3152	0/0:21,0:21:63.22:0,63,1715	0/0:37,0:37:99:0,111,3054	1/1:1,23:24:69.24:1327,69,0	1/1:1,38:39:99:1980,102,0	0/0:31,0:30:93.28:0,93,2498	1/1:0,7:7:15.05:299,15,0
chr10	52948334	.	GGTGAGA	G	23075.74	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=19.628;DP=824;FS=8.337;HRun=0;HaplotypeScore=183.8966;InbreedingCoeff=0.9993;MQ=75.56;MQ0=0;MQRankSum=-20.591;QD=52.33;ReadPosRankSum=1.680;VQSLOD=3.9980;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,37:45:81.23:1894,81,0	1/1:1,15:16:42.14:1008,42,0	0/0:34,0:34:99:0,99,3042	0/0:25,0:25:66.21:0,66,2193	1/1:3,16:19:42.06:904,42,0	1/1:1,25:26:57.20:1369,57,0	1/1:1,28:29:66.23:1585,66,0	1/1:7,31:38:90.25:1896,90,0	1/1:1,18:19:39.13:937,39,0	1/1:3,20:23:63.22:1511,63,0	1/1:1,18:19:45.15:1045,45,0	0/0:49,0:49:99:0,138,4929	0/0:51,0:51:99:0,151,5138	1/1:3,42:45:99:2522,105,0	1/1:1,33:34:69.24:1658,69,0	1/1:2,24:26:63.18:1513,63,0	1/1:3,18:21:33.11:793,33,0	1/1:1,13:14:30.10:721,30,0	0/0:29,0:29:84.22:0,84,2528	0/0:30,0:30:78.25:0,78,2531	0/0:55,0:55:99:0,157,5261	0/0:26,0:26:78.27:0,78,2713	0/0:20,0:20:42.14:0,42,1451	0/0:34,0:34:99:0,99,3485	1/1:2,29:31:75.26:1802,75,0	1/1:5,21:26:63.21:1414,63,0	0/0:30,0:30:90.28:0,90,2964	1/1:0,10:10:21.07:505,21,0
chr10	52948430	.	AATGGATGGATGGATGG	A	13872.18	PASS	AB=0.871;AC=27;AF=0.482;AN=56;BaseQRankSum=15.240;DP=847;FS=7.193;HRun=0;HaplotypeScore=396.5598;InbreedingCoeff=0.5048;MQ=62.20;MQ0=5;MQRankSum=-11.222;QD=32.04;ReadPosRankSum=-0.498;VQSLOD=1.5335;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:37:99:105,0,139	0/1:8,0:14:35.66:179,0,36	0/0:33,0:22:8.99:0,9,118	0/0:34,0:26:7.45:0,7,367	1/1:9,26:35:53.98:1485,54,0	1/1:10,8:18:27.09:1170,27,0	0/1:15,9:24:67.63:249,0,68	0/1:36,0:36:1.82:51,0,2	1/1:17,9:26:39.13:1538,39,0	1/1:18,22:39:60.13:1526,60,0	1/1:11,7:18:27.08:997,27,0	0/0:39,0:50:87.28:0,87,5213	0/0:45,0:45:93.31:0,93,6174	1/1:17,9:26:30.10:1299,30,0	1/1:21,0:36:27.44:457,27,0	0/1:27,0:39:52:458,0,52	0/1:17,0:17:27.54:86,0,28	0/1:10,0:10:39.67:130,0,40	0/0:23,0:23:39.13:0,39,2128	0/0:42,0:42:84.26:0,84,4934	0/0:56,0:56:99:0,105,6331	0/0:33,0:33:54.19:0,54,3513	0/0:21,0:21:39.13:0,39,2652	0/0:43,0:43:87.27:0,87,5427	1/1:7,14:21:45.14:1870,45,0	1/1:14,13:27:42.14:1818,42,0	0/0:34,0:34:78.27:0,78,4661	1/1:5,4:9:12.04:454,12,0
chr10	52953217	.	CAT	C	2659.49	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=10.592;DP=610;FS=7.102;HRun=0;HaplotypeScore=108.7753;InbreedingCoeff=0.9992;MQ=76.89;MQ0=0;MQRankSum=-1.377;QD=35.46;ReadPosRankSum=0.222;VQSLOD=5.7236;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:87.30:0,87,1576	0/0:17,0:17:48.14:0,48,817	0/0:17,0:17:51.13:0,51,905	0/0:11,0:11:33.08:0,33,558	0/0:25,0:25:75.26:0,75,1373	0/0:33,0:33:96.33:0,96,1759	0/0:20,0:20:54.15:0,54,926	0/0:36,0:36:96.30:0,96,1626	0/0:16,0:16:48.15:0,48,842	0/0:37,0:37:99:0,108,1912	0/0:21,0:21:60.21:0,60,1093	0/0:21,0:21:63.22:0,63,1199	0/0:28,0:28:84.27:0,84,1587	0/0:23,0:23:69.22:0,69,1233	0/0:26,0:26:78.27:0,78,1413	0/0:22,0:22:66.23:0,66,1211	0/0:23,0:23:57.16:0,57,966	0/0:10,0:10:24.08:0,24,438	1/1:2,13:15:39.13:558,39,0	1/1:1,26:27:75.21:1044,75,0	1/1:4,13:17:42.12:574,42,0	0/0:19,0:19:57.20:0,57,1101	0/0:31,0:31:93.27:0,93,1676	0/0:13,0:13:39.13:0,39,742	0/0:22,0:22:66.23:0,66,1204	0/0:23,0:23:66.22:0,66,1160	1/1:1,15:16:45.15:644,45,0	0/0:10,0:10:30.10:0,30,549
chr10	52953534	.	TAA	T	22539.68	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=18.018;DP=813;FS=3.390;HRun=2;HaplotypeScore=96.3904;InbreedingCoeff=0.9995;MQ=80.68;MQ0=0;MQRankSum=-1.775;QD=44.28;ReadPosRankSum=5.422;VQSLOD=4.7654;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,31:31:81.28:1320,81,0	1/1:0,10:10:24.08:391,24,0	0/0:30,0:30:81.26:0,81,1594	0/0:11,0:11:26.79:0,27,418	1/1:0,30:30:84.29:1346,84,0	1/1:0,43:43:99:1810,111,0	1/1:0,21:21:48.16:783,48,0	1/1:0,46:46:99:2176,138,0	1/1:0,25:25:66.23:1076,66,0	1/1:0,34:34:99:1604,99,0	1/1:0,28:28:78.18:1240,78,0	0/0:34,0:34:99:0,102,2063	0/0:37,0:37:99:0,111,2214	1/1:0,36:36:93.32:1516,93,0	1/1:0,44:44:99:1957,120,0	1/1:0,36:36:93.32:1516,93,0	1/1:0,22:22:63.13:995,63,0	1/1:0,16:16:45.15:733,45,0	0/0:28,0:28:81.26:0,81,1550	0/0:31,0:31:93.28:0,93,1783	0/0:43,0:43:99:0,129,2605	0/0:21,0:21:63.22:0,63,1271	0/0:16,0:16:48.15:0,48,929	0/0:22,0:22:66.22:0,66,1305	1/1:0,30:30:81.19:1289,81,0	1/1:0,34:34:99:1663,102,0	0/0:31,0:30:93.29:0,93,1791	1/1:0,23:23:69.24:1124,69,0
chr10	52955545	.	T	TGTGTGT	2120.46	PASS	AB=1.000;AC=37;AF=0.771;AN=48;BaseQRankSum=-2.614;DP=568;FS=24.919;HRun=0;HaplotypeScore=144.8829;InbreedingCoeff=0.5478;MQ=56.47;MQ0=12;MQRankSum=-0.871;QD=5.61;ReadPosRankSum=-3.698;VQSLOD=0.0789;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:22:3.48:40,3,0	./.	./.	./.	1/1:14,0:14:3.01:88,3,0	1/1:23,0:23:6.02:83,6,0	1/1:29,0:29:3.95:70,4,0	1/1:29,0:28:8.15:24,8,0	1/1:14,0:13:0.47:1,0,0	1/1:17,0:17:6.12:76,6,0	./.	0/0:25,0:25:5.97:0,6,102	0/0:27,0:27:12.67:0,13,279	1/1:21,0:21:7.46:175,7,0	1/1:22,0:22:6.49:83,6,0	1/1:21,0:21:6.42:192,6,0	1/1:18,0:18:7.55:88,8,0	1/1:19,0:18:3.48:76,3,0	1/1:15,5:20:19.42:428,19,0	1/1:24,0:23:8.99:201,9,0	1/1:24,0:22:6.01:87,6,0	0/0:18,0:18:3.01:0,3,42	0/0:16,0:15:6.96:0,7,122	0/0:34,0:34:13.34:0,13,501	1/1:11,0:11:9.02:153,9,0	1/1:30,0:30:19.85:265,20,0	1/1:14,0:12:7.27:131,7,0	0/1:5,0:5:0:0,0,0
chr10	52956620	.	ATCTATCTATCTGTCTGTCTGTCTG	A	12715.65	PASS	AB=0.519;AC=27;AF=0.500;AN=54;BaseQRankSum=15.362;DP=771;FS=1.227;HRun=0;HaplotypeScore=399.4028;InbreedingCoeff=0.6698;MQ=58.50;MQ0=0;MQRankSum=-2.637;QD=30.49;ReadPosRankSum=-1.252;VQSLOD=2.1291;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:20.69:0,21,841	0/0:10,0:10:30.10:0,30,2123	0/0:28,0:19:46.86:0,47,952	0/0:20,0:16:39.09:0,39,918	1/1:1,34:35:0.47:2,0,0	1/1:0,32:33:18.06:1173,18,0	0/0:1,29:30:0:0,0,0	1/1:5,42:47:99:1724,126,0	1/1:2,22:24:12.04:785,12,0	0/1:2,0:36:31.93:1401,0,32	0/1:1,27:28:7.63:380,0,8	0/0:28,0:28:84.29:0,84,6248	0/0:38,0:38:99:0,111,7170	1/1:0,32:32:12.55:782,13,0	0/0:35,0:35:99:0,102,6535	0/0:32,0:32:90.30:0,90,5617	0/1:2,14:16:99:190,0,333	1/1:1,12:13:6.02:234,6,0	1/1:0,15:14:39.02:841,39,0	1/1:1,26:27:5.97:58,6,0	./.	0/0:35,0:35:99:0,99,7125	0/0:34,0:34:99:0,102,6786	0/0:17,0:17:39.13:0,39,3132	1/1:0,27:27:15.05:961,15,0	1/1:1,35:36:78.84:2481,79,0	1/1:5,33:38:24.55:1507,25,0	1/1:3,7:10:3.01:196,3,0
chr10	52959613	.	GA	G	3025.46	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=14.831;DP=586;FS=7.647;HRun=6;HaplotypeScore=70.1823;InbreedingCoeff=0.9865;MQ=75.93;MQ0=0;MQRankSum=-0.282;QD=25.42;ReadPosRankSum=2.148;VQSLOD=3.8927;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:81.26:0,81,1065	0/0:13,0:13:39.13:0,39,513	0/0:15,0:15:33.08:0,33,398	0/0:8,0:8:13.18:0,13,137	0/0:39,0:39:99:0,108,1392	0/0:25,0:25:72.23:0,72,947	0/0:11,0:11:30.10:0,30,394	0/0:40,0:40:99:0,114,1487	0/0:15,0:15:45.15:0,45,592	0/0:26,0:26:75.24:0,75,987	0/0:28,0:28:81.26:0,81,1053	0/0:21,0:21:63.20:0,63,815	0/0:25,0:25:75.24:0,75,982	0/0:20,0:20:54.18:0,54,711	0/0:21,0:21:57.17:0,57,735	0/0:18,0:18:48.15:0,48,618	1/1:2,16:18:42.10:451,42,0	1/1:4,8:12:11.93:214,12,0	1/1:2,16:18:48.12:516,48,0	1/1:5,25:30:75.19:806,75,0	1/1:0,7:7:18.05:193,18,0	0/0:8,0:8:24.08:0,24,315	0/0:25,0:25:69.22:0,69,907	0/0:18,0:18:48.16:0,48,631	0/0:25,0:25:72.23:0,72,946	0/0:24,0:24:63.18:0,63,780	1/1:2,32:34:96.24:1031,96,0	0/0:15,0:15:45.11:0,45,574
chr10	52959782	.	T	TA	4350.63	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=11.649;DP=464;FS=3.046;HRun=2;HaplotypeScore=53.2045;InbreedingCoeff=0.9766;MQ=82.39;MQ0=0;MQRankSum=-3.281;QD=35.66;ReadPosRankSum=0.658;VQSLOD=5.2062;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:66.21:0,66,818	0/0:10,0:10:30.09:0,30,372	0/0:13,0:13:35.14:0,35,407	0/0:13,0:14:39.06:0,39,435	0/0:22,0:22:66.21:0,66,815	0/0:19,0:19:54.17:0,54,670	0/0:13,0:13:39.09:0,39,457	0/0:35,0:35:99:0,99,1195	0/0:14,0:14:42.13:0,42,520	0/0:21,0:21:63.20:0,63,781	0/0:16,0:16:45.14:0,45,558	0/0:7,0:7:21.05:0,21,248	0/0:21,0:21:60.19:0,60,743	0/0:13,0:13:36.11:0,36,446	0/0:12,0:12:36.11:0,36,446	0/0:9,0:9:27.08:0,27,335	1/1:1,23:24:60.20:864,60,0	1/1:4,16:20:48.13:664,48,0	1/1:2,21:23:63.20:880,63,0	1/1:1,20:21:60.20:862,60,0	1/1:0,12:12:24.08:346,24,0	0/0:9,0:9:24.08:0,24,298	0/0:23,0:23:66.15:0,66,765	0/0:9,0:9:24.07:0,24,298	0/0:15,0:15:39.12:0,39,484	0/0:20,0:20:51.14:0,51,618	1/1:3,19:22:51.17:734,51,0	0/0:4,0:4:6.02:0,6,74
chr10	52959902	.	AT	A	1623.67	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=6.556;DP=459;FS=6.528;HRun=9;HaplotypeScore=47.6871;InbreedingCoeff=0.9826;MQ=67.23;MQ0=1;MQRankSum=0.535;QD=21.36;ReadPosRankSum=1.874;VQSLOD=4.3990;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:69.20:0,69,795	0/0:8,0:8:21.06:0,21,242	0/0:8,0:7:14.53:0,15,147	0/0:10,0:10:21.04:0,21,229	0/0:28,0:28:78.23:0,78,900	0/0:18,0:18:48.14:0,48,554	0/0:13,0:13:39.12:0,39,450	0/0:37,0:37:93.26:0,93,1057	0/0:6,0:6:15.04:0,15,173	0/0:21,0:21:57.17:0,57,657	0/0:11,0:11:30.09:0,30,346	0/0:24,0:24:63.17:0,63,716	0/0:19,0:19:54.14:0,54,610	0/0:15,0:15:39.12:0,39,450	0/0:21,0:21:60.18:0,60,693	0/0:14,0:14:33.10:0,33,381	0/0:12,0:12:30.09:0,30,346	0/0:8,0:8:22.27:0,22,231	1/1:1,19:20:57.03:521,57,0	1/1:3,17:20:51.03:466,51,0	1/1:2,15:17:39.01:357,39,0	0/0:11,0:11:30.08:0,30,338	0/0:13,0:13:33.09:0,33,372	0/0:5,0:5:15.04:0,15,173	0/0:25,0:25:75.22:0,75,864	0/0:18,0:18:45.13:0,45,519	1/1:1,18:19:48.02:439,48,0	0/0:15,0:15:39.12:0,39,449
chr10	52960627	.	GA	G	13478.72	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=15.052;DP=667;FS=0.345;HRun=7;HaplotypeScore=92.6205;InbreedingCoeff=0.9948;MQ=63.45;MQ0=1;MQRankSum=-2.311;QD=26.64;ReadPosRankSum=3.054;VQSLOD=5.1929;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,36:39:99:1070,105,0	1/1:0,7:7:21.05:214,21,0	0/0:19,1:19:13.30:0,13,489	0/0:24,0:21:41.66:0,42,637	1/1:0,24:24:66.14:673,66,0	1/1:3,26:29:75.17:765,75,0	1/1:2,17:19:42.09:428,42,0	1/1:3,29:32:87.15:867,87,0	1/1:2,20:22:57.13:581,57,0	1/1:4,25:29:75.14:753,75,0	1/1:3,23:26:63.13:642,63,0	0/0:27,0:27:78.25:0,78,981	0/0:23,0:23:66.19:0,66,806	1/1:1,11:12:33.07:336,33,0	1/1:1,24:25:72.16:734,72,0	1/1:0,25:25:69.16:704,69,0	1/1:2,23:25:60.13:612,60,0	1/1:3,23:26:64.49:697,64,0	1/1:1,11:12:30.07:306,30,0	1/1:1,27:28:81.18:824,81,0	1/1:2,26:28:72.16:734,72,0	0/0:24,0:24:69.22:0,69,868	0/0:19,0:19:48.15:0,48,604	0/0:24,0:24:69.12:0,69,807	1/1:6,16:22:45.10:459,45,0	1/1:3,30:33:90.20:918,90,0	1/1:2,30:32:81.18:824,81,0	1/1:0,11:11:33.08:337,33,0
chr10	52960951	.	C	CA	17469.62	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=9.997;DP=608;FS=7.695;HRun=2;HaplotypeScore=81.8567;InbreedingCoeff=0.9928;MQ=86.20;MQ0=0;MQRankSum=-3.310;QD=38.31;ReadPosRankSum=3.026;VQSLOD=5.2950;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,23:25:65.96:919,66,0	1/1:1,6:7:18.06:259,18,0	0/0:22,0:22:57.16:0,57,689	0/0:17,0:17:33.03:0,33,454	1/1:1,25:26:75.21:1049,75,0	1/1:0,21:21:51.17:735,51,0	1/1:0,16:16:36.12:518,36,0	1/1:3,36:39:99:1453,105,0	1/1:0,17:17:45.15:648,45,0	1/1:1,27:28:84.25:1158,84,0	1/1:0,20:21:63.17:877,63,0	0/0:17,0:17:48.15:0,48,594	0/0:34,0:34:93.28:0,93,1136	1/1:0,16:16:42.14:605,42,0	1/1:1,27:28:63.21:907,63,0	1/1:0,16:16:42.14:605,42,0	1/1:1,35:36:93.31:1339,93,0	1/1:0,5:5:12.04:173,12,0	1/1:1,11:12:33.10:458,33,0	1/1:0,35:35:99:1445,102,0	1/1:0,12:12:33.11:475,33,0	0/0:26,0:26:75.24:0,75,929	0/0:23,0:23:69.22:0,69,851	0/0:13,0:13:36.11:0,36,446	1/1:1,23:24:63.21:907,63,0	1/1:0,28:28:84.28:1209,84,0	1/1:2,22:24:63.21:907,63,0	1/1:0,20:20:57.19:821,57,0
chr10	52961721	.	AACAG	A	9957.80	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=10.170;DP=544;FS=1.949;HRun=0;HaplotypeScore=248.7450;InbreedingCoeff=0.9879;MQ=90.47;MQ0=0;MQRankSum=-13.124;QD=45.47;ReadPosRankSum=1.618;VQSLOD=5.2537;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:7:18.06:0,18,453	0/0:12,0:12:36.12:0,36,946	0/0:31,0:32:71.46:0,71,1737	0/0:26,0:25:60.20:0,60,1451	1/1:1,27:28:42.30:1067,42,0	1/1:1,17:18:51.17:913,51,0	1/1:5,11:16:33.11:602,33,0	1/1:6,16:22:51.17:935,51,0	1/1:4,22:26:69.22:1216,69,0	1/1:3,25:28:75.21:1316,75,0	1/1:0,14:14:36.12:652,36,0	0/0:20,0:20:60.21:0,60,1551	0/0:26,0:26:72.25:0,72,1859	1/1:4,17:21:54.17:962,54,0	0/0:26,0:26:72.25:0,72,1836	0/0:19,0:19:45.02:0,45,1331	0/0:12,0:12:27.06:0,27,597	0/0:6,0:6:15.05:0,15,395	0/0:23,0:23:48.16:0,48,1244	0/0:32,0:32:90.28:0,90,2185	0/0:6,0:6:9.03:0,9,237	0/0:23,0:23:69.24:0,69,1822	0/0:18,0:18:54.15:0,54,1314	0/0:12,0:12:30.10:0,30,792	1/1:2,13:15:42.06:697,42,0	1/1:1,20:21:57.20:1047,57,0	0/0:25,0:24:63.22:0,63,1579	1/1:0,10:10:30.10:550,30,0
chr10	52961742	.	A	ATGAATAAGTAT	37374.96	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=14.886;DP=444;FS=3.903;HRun=0;HaplotypeScore=195.7026;InbreedingCoeff=0.9819;MQ=90.87;MQ0=1;MQRankSum=-15.879;QD=126.69;ReadPosRankSum=3.658;VQSLOD=4.8681;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,3:7:15.05:730,15,0	1/1:1,7:10:30.10:1557,30,0	0/0:31,0:31:90.15:0,90,2626	0/0:18,0:17:40.33:0,40,1502	1/1:0,16:21:49.70:2598,50,0	1/1:0,11:16:41.18:2332,41,0	1/1:0,5:9:22.63:1058,23,0	1/1:0,7:25:62.02:2811,62,0	1/1:0,13:18:48.16:2618,48,0	1/1:1,9:13:33.11:1714,33,0	1/1:0,9:11:30.10:1552,30,0	0/0:21,0:21:63.22:0,63,2172	0/0:23,0:23:69.21:0,69,2414	1/1:0,9:11:30.10:1566,30,0	1/1:4,14:21:52.66:2599,53,0	1/1:0,8:14:39.13:1963,39,0	1/1:2,3:7:14.98:836,15,0	1/1:1,0:4:12:347,12,0	1/1:7,3:16:29.87:958,30,0	1/1:5,7:18:48.24:1801,48,0	1/1:0,2:4:12.04:553,12,0	0/0:27,0:27:78.27:0,78,2735	0/0:20,0:20:60.19:0,60,1999	0/0:9,0:9:27.09:0,27,994	1/1:0,10:15:42.14:2227,42,0	1/1:0,14:19:57.20:2956,57,0	1/1:1,12:23:66.23:3178,66,0	1/1:0,7:11:31.62:1422,32,0
chr10	52961743	.	C	CA	5592.01	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=15.001;DP=455;FS=0.402;HRun=6;HaplotypeScore=201.1999;InbreedingCoeff=0.9516;MQ=89.94;MQ0=1;MQRankSum=-14.975;QD=18.22;ReadPosRankSum=3.051;VQSLOD=2.6586;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,3:7:9.01:83,9,0	1/1:3,7:10:26.98:239,27,0	0/0:31,0:31:69.12:0,69,688	0/0:18,0:17:21.63:0,22,363	1/1:6,17:23:47.01:401,47,0	1/1:5,11:16:41.97:376,42,0	1/1:5,5:10:14.94:129,15,0	1/1:18,7:25:48.71:344,49,0	1/1:5,13:18:44:375,44,0	1/1:5,9:15:36.03:358,36,0	1/1:4,9:13:26.98:235,27,0	0/0:21,0:21:57.13:0,57,581	0/0:23,0:23:63.14:0,63,642	1/1:3,9:11:27.01:243,27,0	1/1:8,14:22:47.94:419,48,0	1/1:7,8:15:35.94:310,36,0	1/1:5,3:8:17.98:162,18,0	1/1:5,0:5:5.45:36,5,0	1/1:14,3:17:21.35:134,21,0	1/1:8,8:16:32.86:275,33,0	1/1:3,2:5:8.97:76,9,0	0/0:27,0:27:72.14:0,72,727	0/0:19,0:19:54.11:0,54,544	0/0:9,0:9:27.04:0,27,268	1/1:5,10:15:30:273,30,0	1/1:5,15:19:53.69:485,54,0	1/1:11,12:23:46.21:405,46,0	1/1:3,8:11:25.27:234,25,0
chr10	52962086	.	G	GT	21495.46	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=18.148;DP=728;FS=3.145;HRun=1;HaplotypeScore=179.3119;InbreedingCoeff=0.9968;MQ=82.76;MQ0=0;MQRankSum=-9.239;QD=39.59;ReadPosRankSum=2.746;VQSLOD=4.4163;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,33:33:90.30:1347,90,0	1/1:0,5:5:15.05:224,15,0	0/0:29,0:29:72.70:0,73,931	0/0:22,0:22:63.19:0,63,793	1/1:1,25:26:72.24:1062,72,0	1/1:3,33:36:93.32:1393,93,0	1/1:3,30:35:93.31:1367,93,0	1/1:4,31:36:99:1391,102,0	1/1:3,12:16:42.14:620,42,0	1/1:4,29:34:99:1463,102,0	1/1:1,28:29:78.26:1165,78,0	0/0:21,0:21:63.20:0,63,817	0/0:30,0:30:87.28:0,87,1128	1/1:2,30:33:93.27:1347,93,0	1/1:2,27:29:72.24:1060,72,0	1/1:2,28:32:78.26:1159,78,0	1/1:1,24:25:63.21:943,63,0	1/1:1,11:12:28.91:401,29,0	1/1:5,18:23:63.21:914,63,0	1/1:0,32:32:96.28:1409,96,0	1/1:0,20:20:54.18:799,54,0	0/0:35,0:35:99:0,105,1349	0/0:27,0:27:81.26:0,81,1051	0/0:21,0:21:63.20:0,63,818	1/1:2,23:25:66.22:987,66,0	1/1:3,22:25:63.20:917,63,0	1/1:2,24:26:75.25:1122,75,0	1/1:1,10:11:27.09:404,27,0
chr10	52962208	.	A	AT	19734.29	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=18.201;DP=747;FS=5.542;HRun=1;HaplotypeScore=167.4197;InbreedingCoeff=0.9995;MQ=81.29;MQ0=0;MQRankSum=-12.757;QD=37.59;ReadPosRankSum=3.042;VQSLOD=4.2046;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,37:38:90.22:1297,90,0	1/1:1,10:11:33.11:490,33,0	0/0:33,0:33:91.78:0,92,1176	0/0:32,0:32:67.41:0,67,1050	1/1:2,23:25:63.08:869,63,0	1/1:2,23:24:57.10:805,57,0	1/1:0,22:22:54.14:783,54,0	1/1:4,32:35:99:1379,99,0	1/1:1,27:28:78.21:1121,78,0	1/1:2,37:39:99:1614,111,0	1/1:5,19:24:60.07:824,60,0	0/0:35,0:35:99:0,99,1285	0/0:45,0:45:99:0,129,1667	1/1:2,28:30:75.25:1115,75,0	1/1:0,29:29:81.27:1212,81,0	1/1:3,29:32:81.27:1213,81,0	1/1:0,15:15:45.15:673,45,0	1/1:4,6:10:24.05:328,24,0	1/1:0,24:24:63.19:921,63,0	1/1:3,24:26:66.18:964,66,0	1/1:2,27:29:69.19:1008,69,0	0/0:25,0:25:75.24:0,75,974	0/0:16,0:16:48.16:0,48,623	0/0:36,0:36:99:0,108,1399	1/1:0,20:20:60.16:874,60,0	1/1:0,24:24:63.20:923,63,0	1/1:0,20:20:57.15:828,57,0	1/1:0,17:17:33.11:495,33,0
chr10	52962321	.	CTCT	C	11649.81	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=17.805;DP=587;FS=20.324;HRun=0;HaplotypeScore=187.2225;InbreedingCoeff=0.9212;MQ=72.21;MQ0=1;MQRankSum=-17.648;QD=30.58;ReadPosRankSum=0.553;VQSLOD=3.7374;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,21:24:33.11:537,33,0	1/1:1,5:6:9.03:147,9,0	0/0:31,0:31:75.24:0,75,1525	0/0:19,0:19:54.10:0,54,1087	1/1:3,17:20:23.90:379,24,0	1/1:2,15:16:30.10:477,30,0	1/1:2,11:13:15.05:244,15,0	1/1:6,20:25:48.10:691,48,0	1/1:0,34:34:84.29:1367,84,0	1/1:3,22:25:66.23:1075,66,0	1/1:3,11:14:21.07:342,21,0	0/0:44,0:44:99:0,126,2804	0/0:42,0:42:99:0,123,2641	1/1:1,25:26:54.18:879,54,0	1/1:1,24:25:42.14:684,42,0	1/1:2,20:22:48.16:781,48,0	1/1:2,5:7:12.04:195,12,0	1/1:1,3:4:9.03:147,9,0	1/1:1,17:18:42.14:673,42,0	1/1:3,21:24:42.10:655,42,0	1/1:6,10:16:6.02:98,6,0	0/0:27,0:27:81.28:0,81,1783	0/0:20,0:20:57.18:0,57,1203	0/0:23,0:23:69.24:0,69,1515	1/1:0,11:11:27.09:428,27,0	1/1:3,20:23:57.19:919,57,0	1/1:5,20:25:54.18:880,54,0	1/1:0,1:1:3.01:49,3,0
chr10	52962459	.	A	AC	12761.25	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=17.289;DP=501;FS=19.681;HRun=0;HaplotypeScore=133.4817;InbreedingCoeff=0.9925;MQ=72.52;MQ0=0;MQRankSum=-13.487;QD=38.67;ReadPosRankSum=0.844;VQSLOD=2.8449;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,14:14:30.10:451,30,0	1/1:1,13:14:39.13:577,39,0	0/0:21,0:21:63.21:0,63,871	0/0:21,0:21:63.20:0,63,853	1/1:1,20:21:51.15:734,51,0	1/1:0,15:15:42.14:625,42,0	1/1:0,12:12:27.09:402,27,0	1/1:1,12:13:36.12:533,36,0	1/1:1,17:18:45.15:677,45,0	1/1:1,18:19:51.17:757,51,0	1/1:0,15:15:45.15:663,45,0	0/0:35,0:35:99:0,100,1385	0/0:25,0:25:75.25:0,75,1048	1/1:0,19:19:51.17:767,51,0	1/1:1,22:23:57.19:841,57,0	1/1:0,15:15:36.12:542,36,0	1/1:0,7:7:18.06:265,18,0	1/1:0,4:4:12.04:180,12,0	1/1:2,11:13:30.09:422,30,0	1/1:1,20:21:60.20:893,60,0	1/1:0,16:16:42.10:600,42,0	0/0:25,0:25:75.25:0,75,1048	0/0:18,0:18:54.18:0,54,755	0/0:26,0:26:78.22:0,78,1069	1/1:2,19:21:54.18:796,54,0	1/1:0,20:20:54.18:801,54,0	1/1:0,15:15:36.12:548,36,0	1/1:0,15:15:45.15:686,45,0
chr10	52962573	.	AGTTTT	A	6695.42	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=9.542;DP=327;FS=7.092;HRun=0;HaplotypeScore=74.9274;InbreedingCoeff=0.8394;MQ=80.41;MQ0=0;MQRankSum=-10.683;QD=33.31;ReadPosRankSum=3.399;VQSLOD=3.8937;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,11:11:12.01:263,12,0	1/1:0,2:2:3.01:67,3,0	0/0:18,0:18:48.18:0,48,711	0/0:14,0:15:35.17:0,35,431	1/1:7,6:13:32.56:418,33,0	1/1:0,15:15:30.08:667,30,0	1/1:0,7:7:12.04:264,12,0	1/1:0,8:8:1.24:160,1,0	1/1:0,10:10:12.04:264,12,0	1/1:0,11:11:30.05:581,30,0	1/1:0,7:8:11.05:219,11,0	0/0:26,0:26:78.22:0,78,2058	0/0:18,0:18:51.14:0,51,1455	1/1:0,14:14:27.09:595,27,0	1/1:0,15:15:18.06:396,18,0	1/1:0,19:19:27.09:596,27,0	1/1:0,10:10:12.04:266,12,0	1/1:0,7:7:2.99:68,3,0	1/1:0,7:7:17.93:220,18,0	1/1:2,3:4:9.02:161,9,0	1/1:0,4:4:9.01:187,9,0	0/0:9,0:9:27.06:0,27,718	0/0:14,0:14:39.12:0,39,1098	0/0:26,0:26:78.18:0,78,2027	1/1:0,8:8:15.01:288,15,0	1/1:3,5:8:20.97:334,21,0	1/1:2,10:12:23.17:481,23,0	1/1:0,6:6:9.03:199,9,0
chr10	52962707	.	G	GA	8671.25	PASS	AC=40;AF=0.741;AN=54;BaseQRankSum=13.561;DP=453;FS=3.969;HRun=1;HaplotypeScore=118.5226;InbreedingCoeff=0.9206;MQ=66.89;MQ0=3;MQRankSum=-12.997;QD=34.41;ReadPosRankSum=-1.382;VQSLOD=4.1550;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,19:25:55.85:751,56,0	1/1:0,1:1:3.01:45,3,0	0/0:36,0:30:81.78:0,82,926	0/0:44,0:35:49.67:0,50,696	1/1:0,10:10:20.86:189,21,0	1/1:2,14:16:42.14:608,42,0	1/1:1,17:18:39.13:580,39,0	1/1:5,16:20:57.12:787,57,0	1/1:0,15:15:39.13:580,39,0	1/1:0,4:4:12.04:179,12,0	./.	0/0:21,0:21:60.20:0,60,777	0/0:19,0:19:57.18:0,57,737	1/1:3,12:15:36.12:527,36,0	1/1:2,15:17:45.15:659,45,0	1/1:2,20:22:63.21:937,63,0	1/1:2,9:12:33.02:444,33,0	1/1:1,7:8:18.06:261,18,0	1/1:2,8:9:20.90:281,21,0	1/1:0,12:12:36.08:506,36,0	1/1:4,10:14:21.07:312,21,0	0/0:24,0:24:63.16:0,63,798	0/0:24,0:24:69.22:0,69,894	0/0:26,0:26:75.20:0,75,953	1/1:0,6:6:12.04:179,12,0	1/1:5,13:18:47.97:597,48,0	1/1:0,7:7:15.05:224,15,0	1/1:1,0:1:3:25,3,0
chr10	52963789	.	A	AGGCT	19005.32	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=1.861;DP=481;FS=40.072;HRun=0;HaplotypeScore=86.7211;InbreedingCoeff=0.9613;MQ=59.14;MQ0=1;MQRankSum=-3.049;QD=56.40;ReadPosRankSum=0.966;VQSLOD=3.3034;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,32:38:63.22:1722,63,0	1/1:1,6:7:18.01:404,18,0	0/0:15,0:10:27.04:0,27,400	0/0:26,0:23:53.85:0,54,834	1/1:1,16:17:26.99:674,27,0	1/1:1,12:13:30.10:819,30,0	1/1:5,16:22:30.10:795,30,0	1/1:2,18:22:66.12:1441,66,0	1/1:1,10:13:24.08:655,24,0	1/1:2,13:15:39.05:1003,39,0	1/1:1,9:10:14.98:346,15,0	0/0:18,0:18:51.14:0,51,911	0/0:17,0:17:51.17:0,51,988	1/1:2,17:20:48.16:1310,48,0	1/1:1,19:20:51.18:1393,51,0	1/1:0,14:16:42.14:1144,42,0	1/1:2,7:10:24.08:570,24,0	1/1:0,11:11:30.10:820,30,0	1/1:4,12:16:44.99:906,45,0	1/1:2,14:16:5.11:703,5,0	1/1:2,18:20:48.16:1313,48,0	0/0:16,0:16:47.98:0,48,853	0/0:13,0:13:36.12:0,36,698	0/0:38,0:38:99:0,102,1862	1/1:4,19:23:48.10:1198,48,0	1/1:0,13:15:45.01:949,45,0	1/1:0,8:8:24.08:656,24,0	1/1:0,5:5:8.96:182,9,0
chr10	52963896	.	GATT	G	2108.12	PASS	AB=0.612;AC=30;AF=0.536;AN=56;BaseQRankSum=11.364;DP=241;FS=25.495;HRun=0;HaplotypeScore=76.7381;InbreedingCoeff=0.0623;MQ=70.55;MQ0=0;MQRankSum=-10.569;QD=15.06;ReadPosRankSum=3.775;VQSLOD=1.3380;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:4,5:9:99:122,0,140	0/1:3,1:4:34.03:39,0,34	0/0:10,0:9:21.07:0,21,460	0/0:14,0:14:32.90:0,33,727	0/1:1,9:10:8.90:69,0,9	1/1:0,3:4:6:58,6,0	1/1:1,3:4:7.24:81,7,0	0/1:3,10:13:40.12:207,0,40	0/1:3,6:9:17.91:144,0,18	0/1:2,6:8:20.98:123,0,21	0/1:1,5:6:35.98:69,0,36	0/0:20,0:20:60.21:0,60,1415	0/0:18,0:19:57.19:0,57,1307	1/1:1,11:12:31.30:321,31,0	1/1:0,10:11:33.06:323,33,0	1/1:0,0:1:3.01:36,3,0	1/1:2,3:5:9.02:89,9,0	1/1:0,2:2:6.02:66,6,0	0/1:2,2:4:23.87:24,0,34	0/1:4,7:10:9.04:146,0,9	0/1:3,4:6:20.25:20,0,43	0/0:18,0:18:54.18:0,54,1262	0/0:14,0:14:39.61:0,40,946	0/0:6,0:6:18.06:0,18,438	0/1:2,5:7:30.83:76,0,31	0/1:2,4:6:36.90:77,0,37	1/1:0,6:6:18.03:174,18,0	1/1:0,1:1:3:28,3,0
chr10	52963900	.	GCTGGA	G	3445.58	PASS	AB=0.587;AC=30;AF=0.536;AN=56;BaseQRankSum=10.701;DP=235;FS=21.643;HRun=0;HaplotypeScore=80.9374;InbreedingCoeff=0.0956;MQ=70.87;MQ0=0;MQRankSum=-10.523;QD=25.71;ReadPosRankSum=3.653;VQSLOD=1.7584;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:5,5:11:99:205,0,99	0/1:1,1:2:18.17:36,0,18	0/0:10,0:9:21.04:0,21,622	0/0:14,0:15:39.10:0,39,1038	1/1:1,9:10:4.31:115,4,0	0/1:1,3:4:4.19:71,0,4	1/1:1,3:4:7.27:122,7,0	0/1:2,10:12:6.22:324,0,6	1/1:2,6:8:2.13:226,2,0	0/1:2,6:8:6.94:191,0,7	0/1:2,5:7:32.06:107,0,32	0/0:20,0:20:57.18:0,57,1795	0/0:18,0:18:53.55:0,54,1628	1/1:1,11:12:35.15:481,35,0	1/1:1,10:11:33.11:475,33,0	1/1:1,0:1:3.01:44,3,0	0/1:2,3:5:9.62:119,0,10	1/1:0,2:2:6.02:93,6,0	0/1:1,2:4:23.93:38,0,24	0/1:2,7:8:3.14:231,0,3	0/1:2,4:5:33.42:33,0,39	0/0:18,0:18:54.19:0,54,1791	0/0:14,0:14:42.14:0,42,1392	0/0:6,0:6:18.06:0,18,599	0/1:1,5:6:30.48:115,0,30	0/1:1,4:5:25.63:119,0,26	1/1:0,6:6:18.06:256,18,0	1/1:0,1:1:3.01:42,3,0
chr10	52963973	.	G	GAA	8136.58	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=9.761;DP=414;FS=7.792;HRun=7;HaplotypeScore=106.3637;InbreedingCoeff=0.9765;MQ=61.23;MQ0=1;MQRankSum=-5.911;QD=24.66;ReadPosRankSum=2.742;VQSLOD=3.4826;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,0:23:52.13:183,52,0	1/1:1,0:4:7.49:26,7,0	0/0:8,0:7:21.05:0,21,224	0/0:10,0:10:30.04:0,30,321	1/1:4,19:23:48.16:786,48,0	1/1:3,8:12:18.06:295,18,0	1/1:2,10:12:24.08:394,24,0	1/1:9,16:24:48.12:740,48,0	1/1:2,14:16:42.07:621,42,0	1/1:3,18:22:59.69:935,60,0	1/1:2,15:18:48.12:718,48,0	0/0:12,0:12:36.09:0,36,408	0/0:16,0:16:45.12:0,45,514	1/1:4,18:22:57.19:925,57,0	1/1:1,0:14:30.42:116,30,0	1/1:0,0:11:27.45:97,27,0	1/1:2,0:11:18.44:62,18,0	1/1:0,0:11:27.45:96,27,0	1/1:3,0:16:14.63:93,15,0	1/1:2,0:18:39.65:139,40,0	1/1:2,0:11:22.96:95,23,0	0/0:13,0:13:36.07:0,36,406	0/0:16,0:16:45.12:0,45,513	0/0:9,0:9:21.06:0,21,244	1/1:1,14:16:47.61:717,48,0	1/1:2,13:15:35.79:590,36,0	1/1:2,0:17:32.10:114,32,0	1/1:3,10:13:24.08:394,24,0
chr10	52965417	.	G	GAAA	14553.94	PASS	AB=1.000;AC=43;AF=0.768;AN=56;BaseQRankSum=3.202;DP=626;FS=7.300;HRun=9;HaplotypeScore=106.6213;InbreedingCoeff=0.9086;MQ=67.60;MQ0=1;MQRankSum=-3.260;QD=29.52;ReadPosRankSum=-2.383;VQSLOD=3.0248;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,0:44:84.93:646,85,0	1/1:0,1:2:6:82,6,0	0/1:8,0:8:2.65:3,0,118	0/0:15,0:14:21.03:0,21,248	1/1:5,25:32:81.04:1278,81,0	1/1:3,19:23:48.16:947,48,0	1/1:2,16:21:39.09:697,39,0	1/1:11,30:45:99:1885,111,0	1/1:3,10:15:30.08:539,30,0	1/1:12,12:27:54.13:876,54,0	1/1:5,14:20:48.05:830,48,0	0/0:33,0:34:73.74:0,74,918	0/0:24,0:24:63.10:0,63,753	1/1:4,9:15:17.96:299,18,0	1/1:1,1:36:83.20:662,83,0	1/1:4,1:28:59.79:496,60,0	1/1:2,0:18:16.20:35,16,0	1/1:1,0:16:19.04:50,19,0	1/1:1,12:17:51.09:832,51,0	1/1:9,22:33:72.20:1205,72,0	1/1:4,8:12:26.12:478,26,0	0/0:15,0:15:45.12:0,45,542	0/0:16,0:17:46.73:0,47,604	0/0:27,0:28:70.77:0,71,893	1/1:5,1:23:32.14:432,32,0	1/1:4,15:20:45.12:763,45,0	1/1:5,22:27:63.22:1242,63,0	1/1:0,7:8:15.05:278,15,0
chr10	52966402	.	AGAAT	A	22212.01	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=13.483;DP=710;FS=1.456;HRun=0;HaplotypeScore=130.5253;InbreedingCoeff=0.9943;MQ=84.94;MQ0=0;MQRankSum=-5.850;QD=42.72;ReadPosRankSum=5.117;VQSLOD=5.4418;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,42:47:99:1964,108,0	1/1:1,12:13:33.11:600,33,0	0/0:26,0:26:63.22:0,63,1585	0/0:23,0:23:54.18:0,54,1244	1/1:2,19:21:51.17:928,51,0	1/1:5,20:25:54.19:982,54,0	1/1:2,24:26:66.23:1200,66,0	1/1:4,40:44:99:2015,114,0	1/1:2,27:29:69.24:1255,69,0	1/1:4,22:26:60.21:1083,60,0	1/1:2,18:20:36.12:655,36,0	0/0:34,0:34:96.33:0,96,2489	0/0:31,0:31:81.27:0,81,1986	1/1:0,23:23:69.24:1255,69,0	1/1:2,23:25:57.20:1037,57,0	1/1:1,30:31:75.26:1363,75,0	1/1:3,23:26:51.17:928,51,0	1/1:1,14:15:39.13:709,39,0	1/1:2,14:16:42.13:686,42,0	1/1:0,26:26:72.25:1309,72,0	1/1:2,29:31:60.21:1091,60,0	0/0:31,0:31:90.28:0,90,2245	0/0:21,0:21:60.21:0,60,1551	0/0:24,0:24:63.22:0,63,1579	1/1:3,17:20:45.15:818,45,0	1/1:2,18:20:54.19:974,54,0	1/1:3,24:27:63.12:1144,63,0	1/1:4,5:9:12.04:218,12,0
chr10	52967045	.	CAAAAATCA	C	1509.54	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=-4.848;DP=577;FS=5.869;HRun=0;HaplotypeScore=210.4384;InbreedingCoeff=-0.0188;MQ=62.33;MQ0=3;MQRankSum=-0.733;QD=5.15;ReadPosRankSum=-8.789;VQSLOD=-0.1159;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:28:94.19:105,0,94	0/0:5,0:5:2.60:0,3,10	0/0:23,0:14:16.29:0,16,522	0/0:29,0:19:12.78:0,13,459	0/1:23,0:23:99:114,0,364	0/1:20,0:20:13.73:14,0,418	0/1:25,0:25:92.49:92,0,439	0/1:40,0:40:99:192,0,625	0/0:15,0:15:11.97:0,12,435	0/1:25,0:25:22.45:22,0,715	0/1:29,0:29:63.66:64,0,473	0/0:21,0:21:53.69:0,54,1391	0/0:29,0:29:60.12:0,60,1657	0/0:16,0:16:32.67:0,33,503	0/0:23,0:22:2.67:0,3,11	0/1:24,0:23:57.40:57,0,81	1/1:14,2:17:39.05:574,39,0	1/1:3,10:13:15.05:369,15,0	0/0:18,0:18:34.35:0,34,279	0/0:14,0:14:24.05:0,24,226	0/0:20,0:20:35.44:0,35,325	0/0:15,0:15:45.14:0,45,1381	0/0:11,0:11:33.11:0,33,1032	0/0:24,0:24:66.21:0,66,2165	0/1:16,0:15:10.18:10,0,404	0/1:22,0:22:54.86:55,0,686	0/0:21,0:21:38.44:0,38,374	0/1:10,0:10:5.49:5,0,199
chr10	52967048	.	A	AC	5844.10	PASS	AB=0.649;AC=16;AF=0.286;AN=56;BaseQRankSum=2.749;DP=553;FS=2.719;HRun=0;HaplotypeScore=132.3866;InbreedingCoeff=0.4246;MQ=62.64;MQ0=3;MQRankSum=-7.575;QD=25.86;ReadPosRankSum=4.278;VQSLOD=5.4007;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:29:19.14:0,19,313	0/0:0,0:5:2.74:0,3,12	0/0:22,0:13:29.66:0,30,362	0/0:29,0:19:29.55:0,30,444	0/1:9,11:21:9.07:485,0,9	1/1:10,9:19:5.13:449,5,0	0/1:16,9:26:98.69:445,0,99	0/1:12,19:34:47.83:801,0,48	0/1:8,8:16:16.43:383,0,16	1/1:11,14:25:15.20:794,15,0	1/1:14,11:26:21.40:612,21,0	0/0:18,0:18:51.10:0,51,635	0/0:27,0:27:81.15:0,81,945	1/1:6,9:15:7.03:390,7,0	0/0:0,0:20:2.80:0,3,13	0/0:4,0:22:4.90:0,5,69	0/0:16,0:16:24.58:0,25,215	0/0:12,0:12:16:0,16,78	0/0:17,0:17:43.29:0,43,453	0/0:15,0:15:39.48:0,39,481	0/0:21,0:21:44.95:0,45,533	0/0:16,0:16:45.15:0,45,618	0/0:11,0:11:33.11:0,33,450	0/0:24,0:24:72.18:0,72,963	0/1:6,10:15:7.58:467,0,8	1/1:3,17:20:39.26:803,39,0	0/0:20,0:20:40.98:0,41,427	0/1:2,6:8:4.68:215,0,5
chr10	52967050	.	ATC	A	6338.45	PASS	AB=1.000;AC=43;AF=0.768;AN=56;BaseQRankSum=10.820;DP=533;FS=0.000;HRun=0;HaplotypeScore=132.3632;InbreedingCoeff=0.7946;MQ=61.70;MQ0=3;MQRankSum=-9.661;QD=15.24;ReadPosRankSum=2.137;VQSLOD=4.8679;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:27:62.20:850,62,0	1/1:5,0:5:3.01:35,3,0	0/1:21,0:12:43.39:43,0,233	0/0:24,2:16:4.50:0,4,336	1/1:19,0:19:38.79:305,39,0	1/1:18,0:18:37.65:218,38,0	1/1:25,0:25:56.37:348,56,0	1/1:33,1:34:95.56:703,96,0	1/1:17,0:17:28.55:149,29,0	1/1:24,0:24:57.35:408,57,0	1/1:25,0:25:62.82:445,63,0	0/0:18,0:18:22.58:0,23,555	0/0:22,0:22:60.57:0,61,670	1/1:15,0:15:30.85:178,31,0	1/1:21,0:20:3.01:35,3,0	1/1:20,3:22:24.07:294,24,0	1/1:15,0:15:38.77:471,39,0	1/1:10,1:11:15.04:166,15,0	1/1:18,0:18:38.15:249,38,0	1/1:14,0:14:8.62:202,9,0	1/1:19,0:19:38.30:222,38,0	0/0:16,0:16:48.13:0,48,675	0/0:10,0:11:32.43:0,32,407	0/0:24,0:24:69.18:0,69,1036	1/1:16,0:15:42.48:287,42,0	1/1:21,0:21:52.38:319,52,0	1/1:18,1:19:38.63:316,39,0	1/1:8,0:8:17.16:95,17,0
chr10	52967051	.	TCAAA	T	4877.14	PASS	AB=0.807;AC=32;AF=0.571;AN=56;BaseQRankSum=1.027;DP=527;FS=0.000;HRun=0;HaplotypeScore=152.2066;InbreedingCoeff=0.1889;MQ=62.88;MQ0=3;MQRankSum=-5.692;QD=12.60;ReadPosRankSum=0.026;VQSLOD=4.2604;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:26:59.58:421,60,0	1/1:5,0:5:3.01:37,3,0	0/0:20,0:13:12.50:0,12,415	0/0:26,0:16:39.10:0,39,381	0/1:17,1:18:39.96:279,0,40	1/1:9,8:17:2.47:167,2,0	0/1:10,15:25:72.99:569,0,73	0/1:24,10:34:66.76:628,0,67	0/1:8,8:16:43.22:67,0,43	0/1:21,2:23:87.76:181,0,88	0/1:13,8:23:68.05:322,0,68	0/0:19,0:19:56.92:0,57,1055	0/0:22,0:22:66.19:0,66,1276	0/1:9,6:15:63.68:104,0,64	1/1:21,0:20:3:29,3,0	0/1:23,0:22:3:160,0,3	1/1:14,0:14:31.81:217,32,0	1/1:11,0:11:14.96:124,15,0	1/1:0,1:18:45.91:394,46,0	1/1:6,0:14:37.44:287,37,0	1/1:0,0:19:40.60:295,41,0	0/0:16,0:16:48.13:0,48,1062	0/0:11,0:11:33.10:0,33,739	0/0:24,0:24:69.14:0,69,1583	0/1:14,2:15:63.83:165,0,64	0/1:17,4:21:99:104,0,140	1/1:2,0:19:38.60:268,39,0	1/1:8,0:8:0.76:59,1,0
chr10	52967052	.	CA	C	231.39	PASS	AB=0.983;AC=22;AF=0.393;AN=56;BaseQRankSum=-0.950;DP=540;FS=1.490;HRun=13;HaplotypeScore=149.5832;InbreedingCoeff=0.2719;MQ=60.45;MQ0=3;MQRankSum=-1.650;QD=0.76;ReadPosRankSum=-0.522;VQSLOD=0.3869;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:27:6.25:6,0,12	1/1:6,0:6:1.82:5,2,0	0/1:21,0:12:40.06:40,0,67	0/1:23,1:14:25.40:25,0,54	0/0:18,0:18:6.63:0,7,82	0/0:17,0:17:12.36:0,12,87	0/1:25,0:25:16.71:17,0,67	0/1:33,0:33:12.92:13,0,81	0/0:16,0:16:18.49:0,18,106	0/0:24,0:24:33.35:0,33,202	0/0:23,0:23:16.67:0,17,129	0/1:17,2:19:10.01:10,0,283	0/0:20,2:22:13.03:0,13,418	0/0:15,0:15:14.87:0,15,93	1/1:21,0:20:1.82:5,2,0	0/1:29,0:27:8.42:10,0,8	0/1:14,0:14:5.29:7,0,5	1/1:12,0:12:10.70:35,11,0	1/1:20,0:19:3.03:43,3,0	1/1:14,0:14:4.28:36,4,0	1/1:19,0:19:19.80:70,20,0	0/0:17,0:17:38.41:0,38,349	0/0:9,0:12:1.81:0,2,153	0/0:24,0:24:48.08:0,48,467	0/0:16,0:15:5.04:0,5,73	0/0:22,0:22:34.31:0,34,197	1/1:19,0:19:26.41:79,26,0	0/0:9,0:9:9.55:0,10,59
chr10	52967055	.	A	AAAT	5789.71	PASS	AB=1.000;AC=24;AF=0.429;AN=56;BaseQRankSum=3.152;DP=540;FS=2.782;HRun=0;HaplotypeScore=152.2242;InbreedingCoeff=0.7647;MQ=61.77;MQ0=3;MQRankSum=-9.724;QD=21.13;ReadPosRankSum=0.730;VQSLOD=4.7265;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:27:4.04:4,0,339	0/0:6,0:6:2.83:0,3,36	0/0:19,0:10:26.20:0,26,282	0/0:24,0:15:21.73:0,22,258	1/1:12,6:18:21.45:424,21,0	1/1:11,8:19:30.69:520,31,0	1/1:20,5:25:3.91:502,4,0	1/1:21,8:29:57.57:782,58,0	1/1:11,6:17:8.08:396,8,0	1/1:15,9:24:42.97:769,43,0	1/1:16,7:23:33.13:568,33,0	0/0:19,0:19:56.91:0,57,733	0/0:21,0:21:60.16:0,60,883	1/1:10,6:16:30.82:442,31,0	0/0:22,0:21:6.01:0,6,68	0/1:29,0:27:36.42:36,0,184	0/0:14,0:15:30.49:0,30,214	0/0:15,0:15:5.38:0,5,128	0/0:21,0:20:9.96:0,10,349	0/0:12,0:12:9.23:0,9,249	0/0:19,0:19:30.35:0,30,403	0/0:16,0:16:48.12:0,48,686	0/0:12,0:12:29.88:0,30,364	0/0:24,0:24:58.38:0,58,881	1/1:10,4:14:9.53:314,10,0	1/1:11,9:21:51.74:708,52,0	0/0:20,0:20:39.96:0,40,444	1/1:6,4:10:23.93:323,24,0
chr10	52967150	.	TTACA	T	5647.99	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=6.526;DP=523;FS=2.526;HRun=0;HaplotypeScore=102.5932;InbreedingCoeff=0.9829;MQ=74.78;MQ0=0;MQRankSum=-4.907;QD=55.37;ReadPosRankSum=5.178;VQSLOD=5.8025;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,26:25:66.23:1379,66,0	1/1:0,4:4:8.77:188,9,0	0/0:15,0:15:45.09:0,45,1076	0/0:29,0:28:84.22:0,84,2109	0/0:21,0:21:63.22:0,63,1798	0/0:18,0:18:54.13:0,54,1434	0/0:24,0:24:66.11:0,66,1694	0/0:30,0:30:90.29:0,90,2410	0/0:20,0:20:57.15:0,57,1567	0/0:17,0:17:51.18:0,51,1400	0/0:8,0:8:24.08:0,24,635	0/0:25,0:25:75.24:0,75,2088	0/0:25,0:25:75.24:0,75,2110	0/0:27,0:27:78.23:0,78,2187	1/1:0,31:31:87.30:1820,87,0	1/1:0,18:18:51.18:1067,51,0	1/1:0,16:16:42.14:879,42,0	1/1:0,7:7:15.05:314,15,0	0/0:15,0:15:45.15:0,45,1227	0/0:9,0:9:27.08:0,27,719	0/0:28,0:28:78.26:0,78,2097	0/0:8,0:8:24.08:0,24,658	0/0:12,0:12:36.12:0,36,1040	0/0:31,0:31:93.32:0,93,2675	0/0:16,0:16:48.16:0,48,1376	0/0:18,0:18:54.19:0,54,1564	0/0:15,0:15:45.11:0,45,1230	0/0:10,0:10:27.08:0,27,720
chr10	52967277	.	C	CCG	461.50	PASS	AB=0.970;AC=30;AF=0.536;AN=56;BaseQRankSum=12.707;DP=433;FS=35.236;HRun=0;HaplotypeScore=184.6062;InbreedingCoeff=0.3734;MQ=69.35;MQ0=8;MQRankSum=-10.130;QD=1.63;ReadPosRankSum=5.241;VQSLOD=1.3535;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:26:14.21:27,0,14	1/1:12,0:12:16.36:64,16,0	0/0:28,0:27:65.27:0,65,994	0/0:21,0:20:36:0,36,453	0/1:19,0:19:1.56:28,0,2	1/1:15,0:14:2.29:10,2,0	1/1:15,0:14:8.69:34,9,0	0/1:24,0:23:0.17:0,0,40	1/1:13,0:13:4.23:28,4,0	0/1:12,0:12:5.27:5,0,11	0/1:23,0:21:7.90:13,0,8	0/0:20,0:20:60.20:0,60,912	0/0:13,0:13:36.11:0,36,527	1/1:16,0:16:18.09:61,18,0	1/1:18,0:18:26.53:87,27,0	1/1:9,0:8:12.26:41,12,0	0/0:18,0:17:0.44:0,0,23	0/1:13,0:11:3.54:4,0,15	0/1:8,2:10:9.12:58,0,9	0/0:5,0:5:4.46:0,4,15	0/1:12,1:12:8.92:35,0,9	0/0:9,0:9:27.08:0,27,379	0/0:11,0:11:33.11:0,33,491	0/0:23,0:24:66.22:0,66,999	1/1:19,0:18:4.79:27,5,0	1/1:14,0:14:1.86:14,2,0	1/1:6,1:7:5.78:95,6,0	1/1:4,0:4:3.38:8,3,0
chr10	52967278	.	CA	C	3226.07	PASS	AB=0.963;AC=39;AF=0.696;AN=56;BaseQRankSum=13.405;DP=427;FS=5.868;HRun=1;HaplotypeScore=165.3269;InbreedingCoeff=0.7375;MQ=69.38;MQ0=8;MQRankSum=-13.877;QD=10.75;ReadPosRankSum=0.962;VQSLOD=1.8001;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:24,4:26:32.26:238,32,0	1/1:12,0:12:24.29:142,24,0	0/0:29,1:29:81.02:0,81,994	0/0:18,1:18:35.75:0,36,403	1/1:18,0:18:43.24:273,43,0	1/1:14,0:13:34.32:179,34,0	1/1:12,2:13:27.02:149,27,0	1/1:22,2:23:47.50:277,47,0	1/1:12,1:13:31.09:191,31,0	1/1:11,1:12:26.43:174,26,0	1/1:22,1:21:40.28:242,40,0	0/0:20,0:20:60.19:0,60,801	0/0:13,0:13:35.88:0,36,449	1/1:16,0:16:43.48:236,43,0	1/1:17,0:17:48.87:264,49,0	1/1:8,1:8:20.18:115,20,0	1/1:14,3:16:5.22:94,5,0	1/1:11,2:11:23.16:149,23,0	0/1:7,1:8:5.01:20,0,5	1/1:5,0:5:3.16:27,3,0	0/1:13,0:12:4.82:63,0,5	0/0:10,0:10:30.05:0,30,345	0/0:11,0:11:33.09:0,33,401	0/0:24,0:24:66.20:0,66,896	1/1:16,3:18:44.01:280,44,0	1/1:13,1:14:38.08:227,38,0	0/1:7,0:7:17.23:20,0,17	1/1:4,0:4:11.68:68,12,0
chr10	52967286	.	C	CA	8249.17	PASS	AB=1.000;AC=37;AF=0.661;AN=56;BaseQRankSum=14.003;DP=454;FS=7.284;HRun=0;HaplotypeScore=179.5764;InbreedingCoeff=0.7558;MQ=67.52;MQ0=8;MQRankSum=-13.729;QD=25.86;ReadPosRankSum=1.664;VQSLOD=4.2460;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,16:22:29.06:448,29,0	1/1:0,11:11:22.59:362,23,0	0/0:32,0:30:82.56:0,83,930	0/0:16,0:15:15.78:0,16,295	1/1:3,15:18:41.85:494,42,0	1/1:3,13:15:41.98:511,42,0	1/1:6,10:15:38.77:441,39,0	1/1:14,16:29:86.70:931,87,0	1/1:2,10:12:33.03:424,33,0	1/1:5,8:13:38.95:439,39,0	1/1:8,18:24:28.93:396,29,0	0/0:20,0:20:60.19:0,60,814	0/0:12,0:12:36.12:0,36,492	1/1:2,16:18:50.97:662,51,0	1/1:2,17:19:57.08:697,57,0	1/1:4,7:9:29.98:327,30,0	1/1:11,9:19:25.63:346,26,0	1/1:3,8:9:27.01:313,27,0	0/0:9,0:9:11.32:0,11,141	0/1:11,0:11:24.07:40,0,24	0/1:13,0:13:31.71:32,0,84	0/0:9,0:9:27.08:0,27,356	0/0:13,0:13:36.08:0,36,480	0/0:24,0:24:69.17:0,69,922	1/1:3,15:17:42.11:525,42,0	1/1:2,13:15:45.09:598,45,0	0/1:10,0:11:10.41:77,0,10	1/1:1,4:5:15.01:187,15,0
chr10	52967293	.	C	CAA	8144.89	PASS	AB=0.889;AC=39;AF=0.696;AN=56;BaseQRankSum=13.128;DP=456;FS=0.000;HRun=1;HaplotypeScore=184.0045;InbreedingCoeff=0.7656;MQ=66.38;MQ0=6;MQRankSum=-13.324;QD=24.24;ReadPosRankSum=0.901;VQSLOD=3.4752;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,13:24:11.64:429,12,0	1/1:1,10:11:24.13:387,24,0	0/0:29,0:27:77.94:0,78,1052	0/0:17,0:15:37.80:0,38,466	1/1:18,0:18:21.90:319,22,0	1/1:15,1:15:32.74:448,33,0	1/1:11,4:15:41.85:477,42,0	1/1:30,3:33:81.79:942,82,0	1/1:13,0:13:38.82:382,39,0	1/1:14,1:15:45.04:489,45,0	1/1:24,2:24:49.35:389,49,0	0/0:19,0:19:54.18:0,54,826	0/0:12,0:12:36.12:0,36,546	1/1:19,0:19:46.70:521,47,0	1/1:3,16:19:55.63:720,56,0	1/1:6,6:10:25.91:363,26,0	0/1:9,9:17:1.94:283,0,2	1/1:6,6:10:15.94:283,16,0	0/1:9,0:9:71.88:72,0,79	1/1:13,0:13:27.05:214,27,0	0/1:11,0:10:31.46:106,0,31	0/0:8,0:8:24.07:0,24,346	0/0:11,0:11:30.07:0,30,432	0/0:24,0:24:66.18:0,66,979	1/1:17,0:16:33.39:396,33,0	1/1:16,0:16:48.04:507,48,0	1/1:12,0:12:31.58:251,32,0	1/1:5,0:5:15.04:167,15,0
chr10	52967295	.	C	CAA	2803.73	PASS	AB=0.937;AC=30;AF=0.536;AN=56;BaseQRankSum=14.119;DP=449;FS=0.000;HRun=1;HaplotypeScore=196.4370;InbreedingCoeff=0.2015;MQ=65.62;MQ0=4;MQRankSum=-12.972;QD=8.42;ReadPosRankSum=4.435;VQSLOD=0.2587;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:24,1:24:18.86:426,0,19	1/1:11,0:11:12.46:316,12,0	0/0:27,0:25:71.22:0,71,973	0/0:17,0:15:40.67:0,41,478	0/1:18,0:18:8.34:48,0,8	0/1:17,0:16:24.78:25,0,31	1/1:14,0:14:24.89:82,25,0	0/1:33,0:33:28.75:62,0,29	1/1:13,0:13:14.68:47,15,0	1/1:14,0:14:13.47:41,13,0	0/1:26,0:24:1.96:33,0,2	0/0:18,0:18:54.18:0,54,826	0/0:12,0:12:36.12:0,36,548	0/1:19,0:19:0.45:43,0,0	1/1:19,0:19:54.54:565,55,0	1/1:10,2:10:16.19:309,16,0	0/1:15,2:16:44.75:225,0,45	1/1:11,0:10:26.86:266,27,0	0/1:8,2:10:56.39:56,0,87	1/1:10,3:13:3.17:90,3,0	0/1:9,3:11:18.91:112,0,19	0/0:8,0:8:24.07:0,24,346	0/0:11,0:11:30.07:0,30,433	0/0:23,0:23:66.20:0,66,981	0/1:16,0:15:3.81:43,0,4	0/1:16,0:16:5.77:26,0,6	0/1:8,3:12:11.80:155,0,12	1/1:5,0:5:7.30:22,7,0
chr10	52967300	.	A	ATG	14552.43	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=12.356;DP=428;FS=32.225;HRun=0;HaplotypeScore=150.2107;InbreedingCoeff=0.9920;MQ=70.18;MQ0=0;MQRankSum=-14.296;QD=46.64;ReadPosRankSum=-0.959;VQSLOD=2.6805;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,16:22:48.04:880,48,0	1/1:0,10:11:33.11:592,33,0	0/0:26,0:25:63.28:0,63,1013	0/0:19,0:17:33.81:0,34,492	1/1:4,14:19:35.80:634,36,0	1/1:6,10:15:39.01:608,39,0	1/1:0,14:14:42.14:803,42,0	1/1:9,24:33:96.24:1730,96,0	1/1:2,9:11:30.05:548,30,0	1/1:4,11:15:39.13:768,39,0	1/1:3,22:23:51.17:929,51,0	0/0:18,0:18:54.18:0,54,881	0/0:12,0:12:36.11:0,36,562	1/1:2,16:18:54.11:953,54,0	1/1:0,18:18:54.19:1012,54,0	1/1:1,7:9:30.10:538,30,0	1/1:0,12:14:42.13:663,42,0	1/1:5,7:12:30.10:535,30,0	1/1:5,0:7:21.07:317,21,0	1/1:3,6:13:30.10:526,30,0	1/1:3,2:7:15.05:258,15,0	0/0:7,0:7:21.07:0,21,343	0/0:10,0:10:27.08:0,27,416	0/0:23,0:23:66.17:0,66,1020	1/1:1,14:14:36.12:654,36,0	1/1:4,11:15:42.10:777,42,0	1/1:2,4:11:33.11:546,33,0	1/1:0,5:5:15.05:282,15,0
chr10	52967349	.	T	TA	10212.21	PASS	AB=0.909;AC=43;AF=0.768;AN=56;BaseQRankSum=-3.459;DP=400;FS=3.746;HRun=5;HaplotypeScore=81.8149;InbreedingCoeff=0.8265;MQ=72.85;MQ0=0;MQRankSum=-3.235;QD=30.04;ReadPosRankSum=2.309;VQSLOD=5.5399;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,28:29:78.25:1026,78,0	1/1:1,5:6:15.05:182,15,0	0/1:9,1:9:27.82:28,0,29	0/0:15,0:15:9.99:0,10,144	1/1:2,15:17:38.99:470,39,0	1/1:2,17:19:42.14:547,42,0	1/1:2,2:4:6.02:79,6,0	1/1:4,38:42:99:1431,111,0	1/1:2,5:7:15.05:189,15,0	1/1:4,17:21:54.18:708,54,0	1/1:4,18:21:45.06:563,45,0	0/0:12,0:12:33.07:0,33,348	0/0:15,0:15:36.09:0,36,387	1/1:2,3:5:6.02:79,6,0	1/1:1,11:12:30.10:390,30,0	1/1:2,7:8:21.07:276,21,0	1/1:2,15:17:42.14:552,42,0	1/1:3,10:13:30.10:395,30,0	1/1:3,19:22:57.16:733,57,0	1/1:2,10:12:26.93:295,27,0	1/1:2,5:6:18.05:222,18,0	0/0:4,0:4:12.03:0,12,129	0/0:4,0:4:9.02:0,9,97	0/0:9,0:9:24.04:0,24,248	1/1:2,15:17:42.14:553,42,0	1/1:3,14:17:42.14:549,42,0	1/1:1,15:16:42.14:553,42,0	1/1:2,14:16:30.10:395,30,0
chr10	52967901	.	T	TTACA	20989.74	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=15.888;DP=468;FS=22.684;HRun=0;HaplotypeScore=159.1525;InbreedingCoeff=0.9786;MQ=91.42;MQ0=4;MQRankSum=-16.317;QD=74.17;ReadPosRankSum=1.773;VQSLOD=4.0784;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,8:10:27.09:719,27,0	1/1:1,8:9:27.07:676,27,0	0/0:29,0:28:58.19:0,58,1615	0/0:24,0:24:72.24:0,72,1437	1/1:3,20:25:60.21:1537,60,0	1/1:0,20:22:63.22:1694,63,0	1/1:2,6:7:21.03:508,21,0	1/1:0,18:24:72.23:1812,72,0	1/1:1,14:15:42.14:1133,42,0	1/1:1,12:12:36.12:987,36,0	1/1:0,9:9:27.09:695,27,0	0/0:29,0:29:87.28:0,87,1758	0/0:31,0:31:93.32:0,93,1935	1/1:1,6:7:21.07:532,21,0	1/1:0,19:21:60.21:1611,60,0	1/1:2,15:17:51.17:1313,51,0	1/1:0,11:11:30.10:810,30,0	1/1:1,3:4:9.03:247,9,0	1/1:0,8:8:24.08:651,24,0	1/1:1,18:20:60.19:1546,60,0	1/1:0,4:4:12.04:285,12,0	0/0:22,0:22:60.19:0,60,1214	0/0:32,0:32:96.33:0,96,1977	0/0:18,0:18:54.19:0,54,1128	1/1:0,14:14:42.14:1078,42,0	1/1:1,17:18:54.19:1459,54,0	1/1:4,13:17:51.16:1283,51,0	1/1:0,5:5:15.05:411,15,0
chr10	52967904	.	A	ATC	12617.05	PASS	AB=0.538;AC=41;AF=0.732;AN=56;BaseQRankSum=17.541;DP=473;FS=23.963;HRun=0;HaplotypeScore=178.3737;InbreedingCoeff=0.8862;MQ=90.41;MQ0=4;MQRankSum=-17.518;QD=43.81;ReadPosRankSum=5.636;VQSLOD=3.1104;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,8:11:22.36:445,22,0	1/1:0,8:8:24.08:420,24,0	0/0:29,0:28:81.66:0,82,1253	0/0:23,0:23:66.20:0,66,1000	1/1:3,21:24:23.01:882,23,0	1/1:2,20:22:46.56:1022,47,0	1/1:1,6:6:18.06:312,18,0	1/1:6,18:24:22.03:925,22,0	1/1:1,14:15:42.14:727,42,0	1/1:3,12:13:39.13:697,39,0	1/1:1,9:10:1.60:380,2,0	0/0:29,0:29:87.30:0,87,1418	0/0:32,0:32:96.33:0,96,1560	0/1:1,6:7:2.43:283,0,2	1/1:2,19:20:56.67:986,57,0	1/1:0,15:15:45.15:763,45,0	1/1:0,11:11:30.10:516,30,0	1/1:0,4:4:12.04:201,12,0	1/1:0,8:8:24.08:422,24,0	1/1:4,18:22:40.54:907,41,0	1/1:1,4:5:10.28:159,10,0	0/0:23,0:23:66.23:0,66,1066	0/0:30,0:30:90.30:0,90,1426	0/0:19,0:19:54.17:0,54,854	1/1:5,14:19:26.51:624,27,0	1/1:1,17:18:47.96:905,48,0	1/1:4,13:17:45.15:776,45,0	1/1:0,5:5:15.05:264,15,0
chr10	52968102	.	CATCT	C	22602.97	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=19.629;DP=705;FS=21.863;HRun=0;HaplotypeScore=207.2650;InbreedingCoeff=0.9948;MQ=77.45;MQ0=0;MQRankSum=-17.931;QD=47.79;ReadPosRankSum=0.607;VQSLOD=3.7965;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,27:32:75.26:1348,75,0	1/1:2,13:15:39.13:727,39,0	0/0:27,0:27:63.84:0,64,1743	0/0:19,0:19:26.50:0,27,707	1/1:3,21:24:63.20:1132,63,0	1/1:3,15:18:45.15:839,45,0	1/1:7,18:25:57.18:1032,57,0	1/1:6,16:22:57.18:1002,57,0	1/1:3,22:25:69.24:1286,69,0	1/1:0,27:27:81.28:1510,81,0	1/1:2,19:21:53.78:1005,54,0	0/0:38,0:38:99:0,111,2952	0/0:43,0:43:99:0,123,3280	1/1:4,26:30:78.27:1454,78,0	1/1:2,27:29:84.27:1535,84,0	1/1:5,43:48:99:2334,126,0	1/1:3,9:12:24.08:447,24,0	1/1:1,9:10:27.09:503,27,0	1/1:0,14:14:42.14:783,42,0	1/1:2,32:34:96.31:1757,96,0	1/1:7,5:12:14.90:228,15,0	0/0:41,0:41:99:0,123,3256	0/0:24,0:24:72.25:0,72,1876	0/0:40,0:40:99:0,114,3039	1/1:2,26:28:78.27:1454,78,0	1/1:5,17:22:54.19:1007,54,0	1/1:3,15:18:51.11:883,51,0	1/1:1,6:7:18.06:336,18,0
chr10	52968132	.	AG	A	15316.64	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=19.806;DP=792;FS=7.175;HRun=3;HaplotypeScore=216.8385;InbreedingCoeff=0.9965;MQ=79.56;MQ0=0;MQRankSum=-16.076;QD=28.52;ReadPosRankSum=1.258;VQSLOD=3.2220;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,30:31:63.20:780,63,0	1/1:1,10:11:30.09:371,30,0	0/0:34,0:34:93.29:0,93,1305	0/0:29,0:29:58.29:0,58,895	1/1:2,27:29:42.13:520,42,0	1/1:1,22:23:54.17:669,54,0	1/1:3,24:27:51.16:632,51,0	1/1:1,25:26:75.24:929,75,0	1/1:2,28:30:84.26:1040,84,0	1/1:3,27:30:81.23:987,81,0	1/1:3,21:24:36.11:446,36,0	0/0:36,0:36:99:0,102,1468	0/0:45,0:45:99:0,132,1873	1/1:2,31:33:81.25:1003,81,0	1/1:0,39:39:99:1263,102,0	1/1:2,47:49:99:1560,126,0	1/1:0,16:16:36.11:446,36,0	1/1:2,8:10:24.07:297,24,0	1/1:1,25:26:75.24:930,75,0	1/1:0,38:38:72.18:874,72,0	1/1:0,20:20:39.12:483,39,0	0/0:37,0:37:99:0,111,1594	0/0:30,0:30:87.29:0,87,1253	0/0:44,0:44:99:0,117,1667	1/1:1,31:32:60.19:743,60,0	1/1:2,22:24:63.16:763,63,0	1/1:0,13:13:36.08:430,36,0	1/1:0,6:6:14.96:151,15,0
chr10	52968262	.	T	TC	23174.91	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=-11.920;DP=872;FS=0.940;HRun=3;HaplotypeScore=83.8946;InbreedingCoeff=0.9985;MQ=85.76;MQ0=0;MQRankSum=-8.084;QD=35.71;ReadPosRankSum=2.415;VQSLOD=5.3949;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,50:51:99:1889,135,0	1/1:0,15:15:39.13:539,39,0	0/0:31,0:31:78.20:0,78,903	0/0:29,0:29:84.14:0,84,972	1/1:1,25:26:63.14:856,63,0	1/1:0,17:17:42.14:581,42,0	1/1:2,28:30:72.24:1008,72,0	1/1:2,20:22:60.18:816,60,0	1/1:2,38:40:93.31:1294,93,0	1/1:3,31:34:90.30:1256,90,0	1/1:1,17:18:42.05:563,42,0	0/0:37,0:37:99:0,102,1213	0/0:47,0:47:99:0,132,1560	1/1:3,39:42:99:1486,108,0	1/1:1,40:41:99:1547,111,0	1/1:3,52:55:99:1965,141,0	1/1:1,25:26:72.24:1008,72,0	1/1:1,18:19:51.17:714,51,0	1/1:1,21:22:60.17:818,60,0	1/1:0,38:38:99:1361,99,0	1/1:0,53:53:99:1890,135,0	0/0:25,0:25:50.09:0,50,742	0/0:25,0:25:72.19:0,72,847	0/0:29,0:29:78.19:0,78,908	1/1:0,20:20:48.16:667,48,0	1/1:4,21:25:60.19:823,60,0	1/1:1,46:46:99:1844,132,0	1/1:2,6:8:18.06:252,18,0
chr10	52969063	.	GC	G	18816.28	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=6.454;DP=784;FS=0.303;HRun=4;HaplotypeScore=81.6851;InbreedingCoeff=0.9969;MQ=89.69;MQ0=0;MQRankSum=-7.284;QD=32.67;ReadPosRankSum=3.111;VQSLOD=5.3847;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,42:43:99:1223,102,0	1/1:1,12:13:36.11:432,36,0	0/0:28,0:28:78.25:0,78,1062	0/0:30,0:31:74.73:0,75,1064	1/1:0,16:16:42.13:503,42,0	1/1:1,23:24:63.19:756,63,0	1/1:0,26:26:72.22:864,72,0	1/1:1,24:25:72.19:829,72,0	1/1:0,36:36:99:1188,99,0	1/1:0,25:25:75.21:887,75,0	1/1:1,23:24:63.19:755,63,0	0/0:44,0:44:99:0,126,1758	0/0:28,0:28:78.23:0,78,1062	1/1:0,43:43:99:1512,126,0	1/1:2,42:44:99:1404,117,0	1/1:0,33:33:87.27:1044,87,0	1/1:1,46:47:99:1656,138,0	1/1:0,18:18:54.17:648,54,0	1/1:4,10:14:30.09:360,30,0	1/1:0,14:14:33.10:396,33,0	1/1:1,43:44:99:1440,120,0	0/0:26,0:26:69:0,69,947	0/0:23,0:23:66.22:0,66,921	0/0:28,0:28:72.24:0,72,1008	1/1:1,26:27:72.22:864,72,0	1/1:0,24:24:72.14:834,72,0	1/1:1,30:31:87.27:1044,87,0	1/1:0,5:5:15.05:180,15,0
chr10	52969785	.	T	TA	21501.37	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=17.659;DP=719;FS=0.643;HRun=2;HaplotypeScore=178.0344;InbreedingCoeff=0.9991;MQ=73.93;MQ0=0;MQRankSum=-5.714;QD=40.95;ReadPosRankSum=-0.522;VQSLOD=4.1462;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,24:27:72.23:1047,72,0	1/1:0,8:8:24.08:359,24,0	0/0:16,0:16:45.12:0,45,547	0/0:16,0:17:24.08:0,24,388	1/1:0,34:34:96.33:1438,96,0	1/1:2,30:32:90.26:1323,90,0	1/1:1,30:31:84.28:1251,84,0	1/1:5,27:32:87.26:1221,87,0	1/1:1,28:29:87.26:1280,87,0	1/1:1,30:31:90.30:1347,90,0	1/1:2,24:26:75.12:1048,75,0	0/0:35,0:35:99:0,102,1322	0/0:28,0:28:84.27:0,84,1090	1/1:1,26:27:72.24:1074,72,0	1/1:1,25:26:72.20:1034,72,0	1/1:5,23:28:75.18:1056,75,0	1/1:2,9:11:30.09:429,30,0	1/1:1,12:13:39.13:577,39,0	1/1:2,16:18:45.15:675,45,0	1/1:2,25:27:78.22:1144,78,0	1/1:1,22:23:66.22:980,66,0	0/0:30,0:30:90.29:0,90,1168	0/0:22,0:22:60.18:0,60,762	0/0:46,0:46:99:0,132,1699	1/1:0,28:28:78.26:1168,78,0	1/1:1,28:29:84.28:1258,84,0	1/1:5,30:35:93.23:1343,93,0	1/1:0,10:10:30.10:450,30,0
chr10	52969836	.	GAGA	G	4626.12	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=7.136;DP=759;FS=28.080;HRun=0;HaplotypeScore=188.7168;InbreedingCoeff=0.9844;MQ=78.96;MQ0=1;MQRankSum=-6.164;QD=39.54;ReadPosRankSum=2.470;VQSLOD=3.4434;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,26:28:66.20:1068,66,0	1/1:1,3:4:9.03:152,9,0	0/0:32,0:29:72.27:0,72,1607	0/0:40,0:38:83.34:0,83,1892	0/0:22,0:22:41.84:0,42,915	0/0:39,0:39:99:0,114,2569	0/0:40,0:40:99:0,117,2546	0/0:36,0:36:99:0,102,2257	0/0:35,0:35:99:0,102,2280	0/0:26,0:26:69.23:0,69,1538	0/0:20,0:20:54.14:0,54,1169	0/0:38,0:38:99:0,111,2533	0/0:35,0:35:99:0,102,2275	0/0:31,0:31:90.26:0,90,1962	1/1:1,33:34:81.26:1309,81,0	1/1:1,33:34:90.26:1467,90,0	1/1:2,6:8:18.05:280,18,0	1/1:3,6:9:24.03:349,24,0	0/0:17,0:17:51.17:0,51,1127	0/0:23,0:23:60.14:0,60,1288	0/0:28,0:28:77.99:0,78,1645	0/0:33,0:33:96.29:0,96,2094	0/0:29,0:29:87.30:0,87,1965	0/0:38,0:38:99:0,111,2319	0/0:22,0:22:60.21:0,60,1364	0/0:25,0:25:72.25:0,72,1659	0/0:27,0:27:78.22:0,78,1727	0/0:6,0:6:18.06:0,18,401
chr10	52970154	.	AC	A	3105.34	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=9.263;DP=652;FS=2.542;HRun=2;HaplotypeScore=124.4011;InbreedingCoeff=0.9944;MQ=83.81;MQ0=0;MQRankSum=-2.105;QD=34.50;ReadPosRankSum=1.544;VQSLOD=3.3587;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:81.23:0,81,1188	0/0:11,0:11:33.11:0,33,484	0/0:26,0:26:71.87:0,72,876	0/0:20,0:20:45.03:0,45,558	0/0:16,0:16:42.14:0,42,628	0/0:16,0:16:48.16:0,48,708	0/0:26,0:26:63.08:0,63,857	0/0:25,0:25:69.23:0,69,1033	0/0:24,0:24:63.17:0,63,917	0/0:28,0:28:81.26:0,81,1177	0/0:19,0:19:54.18:0,54,807	0/0:24,0:24:72.24:0,72,1078	0/0:27,0:27:78.26:0,78,1167	0/0:37,0:37:99:0,105,1478	0/0:35,0:35:96.26:0,96,1388	0/0:20,0:20:51.13:0,51,739	0/0:31,0:31:78.22:0,78,1129	0/0:9,0:9:21.04:0,21,290	1/1:0,18:18:54.18:699,54,0	1/1:0,30:30:78.25:1012,78,0	1/1:0,19:19:51.17:661,51,0	0/0:34,0:34:99:0,99,1444	0/0:19,0:19:57.16:0,57,812	0/0:29,0:29:87.25:0,87,1279	0/0:19,0:19:54.14:0,54,784	0/0:27,0:27:78.26:0,78,1159	1/1:1,22:23:69.22:894,69,0	0/0:5,0:5:15.05:0,15,224
chr10	52970207	.	T	TCAGCAGTA	42411.26	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=-5.644;DP=720;FS=5.083;HRun=0;HaplotypeScore=176.6059;InbreedingCoeff=0.9777;MQ=80.39;MQ0=0;MQRankSum=-17.419;QD=80.48;ReadPosRankSum=2.821;VQSLOD=4.9914;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,18:28:45.15:1925,45,0	1/1:0,6:6:18.06:784,18,0	0/0:27,0:26:72.12:0,72,1643	0/0:27,0:27:75.17:0,75,1701	1/1:7,12:25:20.63:856,21,0	1/1:6,12:19:39.13:1696,39,0	1/1:6,22:31:48.64:2040,49,0	1/1:17,14:38:90.27:3068,90,0	1/1:10,17:28:54.19:2247,54,0	1/1:10,15:26:63.20:2381,63,0	1/1:4,11:16:30.10:1266,30,0	0/0:30,0:30:87.28:0,87,2220	0/0:27,0:27:78.25:0,78,2055	1/1:16,28:45:96.33:4087,96,0	1/1:12,35:53:99:4700,108,0	1/1:6,18:25:48.16:2091,48,0	1/1:7,14:22:42.14:1728,42,0	1/1:4,6:9:24.08:1047,24,0	1/1:9,7:18:45.15:1794,45,0	1/1:14,11:27:51.16:1830,51,0	1/1:17,6:24:24.08:876,24,0	0/0:27,0:27:78.25:0,78,2007	0/0:24,0:24:60.18:0,60,1549	0/0:31,0:31:90.30:0,90,2431	1/1:5,7:13:24.08:1029,24,0	1/1:6,23:33:96.29:3616,96,0	1/1:16,18:35:75.26:3122,75,0	1/1:5,0:5:6.02:230,6,0
chr10	52973116	.	AAGAGAGAGAG	A	244.54	PASS	AB=0.897;AC=10;AF=0.208;AN=48;BaseQRankSum=3.594;DP=563;FS=19.770;HRun=0;HaplotypeScore=154.3930;InbreedingCoeff=0.4916;MQ=62.49;MQ0=11;MQRankSum=-1.879;QD=1.94;ReadPosRankSum=-0.112;VQSLOD=1.4470;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:30.09:0,30,1051	0/0:5,0:5:3.01:0,3,130	./.	0/0:27,0:11:0:0,0,1	./.	1/1:12,4:16:3.01:88,3,0	1/1:21,1:22:2.74:88,3,0	0/0:34,0:34:1.36:0,1,3	0/0:17,0:17:3.01:0,3,72	1/1:26,2:28:2.14:107,2,0	0/1:18,2:20:0.21:0,0,0	0/0:20,0:20:24.08:0,24,963	0/0:16,0:15:8.18:0,8,271	0/0:18,0:18:6.01:0,6,67	0/0:24,0:25:21.04:0,21,640	0/0:25,0:25:24.08:0,24,1009	0/1:20,0:22:0.37:65,0,0	1/1:17,0:16:2.68:11,3,0	0/0:21,0:19:17.08:0,17,322	0/0:25,0:25:12.49:0,12,209	./.	0/0:14,0:14:18.06:0,18,686	0/0:12,0:12:6.02:0,6,187	0/0:33,0:33:30.09:0,30,856	0/0:19,0:19:9.03:0,9,198	0/0:18,0:18:1.55:0,2,4	0/0:18,0:21:8.62:0,9,116	./.
chr10	52973582	.	TATGGCATAGCTA	T	19466.48	PASS	AC=20;AF=0.370;AN=54;BaseQRankSum=18.271;DP=691;FS=0.000;HRun=0;HaplotypeScore=261.1397;InbreedingCoeff=0.9997;MQ=75.00;MQ0=1;MQRankSum=-16.099;QD=80.77;ReadPosRankSum=2.324;VQSLOD=3.9439;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,135,7853	0/0:10,0:10:27.08:0,27,1507	0/0:17,0:17:31.15:0,31,1569	0/0:15,0:16:42:0,42,1837	1/1:3,26:29:63.14:2133,63,0	1/1:2,25:27:66.23:2508,66,0	1/1:2,14:16:33.11:1254,33,0	1/1:8,24:32:72.24:2231,72,0	1/1:2,22:24:51.18:1938,51,0	1/1:4,20:24:60.18:2155,60,0	1/1:3,17:20:42.06:1408,42,0	0/0:28,0:28:84.29:0,84,5006	0/0:40,0:40:99:0,120,6851	1/1:1,22:23:51.18:1938,51,0	0/0:24,0:24:72.25:0,72,4171	0/0:29,0:29:87.30:0,87,5347	0/0:26,0:26:75.26:0,75,4216	0/0:11,0:11:33.11:0,33,1955	0/0:27,0:27:66.23:0,66,3820	0/0:33,0:33:99:0,99,5281	0/0:25,0:24:72.25:0,72,4244	0/0:36,0:36:99:0,105,6012	0/0:28,0:28:84.29:0,84,4451	0/0:28,0:28:81.28:0,81,4298	1/1:3,21:24:45.15:1636,45,0	1/1:1,21:22:63.22:2265,63,0	0/0:25,0:25:72.25:0,72,3886	./.
chr10	52974785	.	TTGTGTGTG	T	7682.14	PASS	AC=20;AF=0.370;AN=54;BaseQRankSum=2.117;DP=835;FS=4.220;HRun=0;HaplotypeScore=241.8157;InbreedingCoeff=0.9411;MQ=63.55;MQ0=5;MQRankSum=-10.721;QD=24.78;ReadPosRankSum=-4.932;VQSLOD=3.6580;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:36:47.13:0,47,448	0/0:1,0:10:14.98:0,15,124	0/0:21,0:12:9.02:0,9,137	0/0:33,0:22:21.54:0,22,600	1/1:11,20:31:8.92:170,9,0	1/1:13,16:30:23.87:511,24,0	1/1:8,24:32:24.08:617,24,0	1/1:13,12:25:36.04:760,36,0	1/1:6,18:24:27.09:684,27,0	1/1:14,20:33:54.16:1310,54,0	1/1:7,13:21:23.95:446,24,0	0/0:31,0:31:63.22:0,63,2512	0/0:38,0:39:90.24:0,90,3239	1/1:9,27:37:24.08:600,24,0	0/0:11,0:35:65.96:0,66,621	0/0:10,0:28:0.59:0,1,298	0/0:22,0:23:60.21:0,60,2361	0/0:8,0:27:57.15:0,57,1117	0/0:14,0:19:30.08:0,30,503	0/0:10,0:23:39.12:0,39,753	0/0:19,0:61:99:0,105,2076	0/0:33,0:35:69.21:0,69,2298	0/0:23,0:23:54.19:0,54,2081	0/0:36,0:38:99:0,105,3860	1/1:9,27:36:33.11:849,33,0	1/1:14,24:39:72.14:1735,72,0	0/0:13,0:36:66.13:0,66,1220	./.
chr10	52976189	.	TA	T	2476.22	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=7.804;DP=522;FS=5.826;HRun=7;HaplotypeScore=63.1610;InbreedingCoeff=0.9895;MQ=74.86;MQ0=1;MQRankSum=-1.590;QD=23.36;ReadPosRankSum=0.608;VQSLOD=3.7216;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,23:28:75.12:749,75,0	1/1:2,7:9:15.03:153,15,0	0/0:16,0:16:27.05:0,27,291	0/0:10,0:9:15.14:0,15,113	0/0:31,0:31:81.21:0,81,968	0/0:18,0:18:54.14:0,54,652	0/0:5,0:5:15.04:0,15,177	0/0:23,0:23:51.16:0,51,642	0/0:15,0:15:36.10:0,36,439	0/0:28,0:28:81.26:0,81,1019	0/0:24,0:24:69.20:0,69,835	0/0:18,0:18:48.15:0,48,593	0/0:20,0:20:39.12:0,39,491	0/0:19,0:19:42.13:0,42,528	1/1:4,10:14:36.07:362,36,0	1/1:4,12:16:39.08:398,39,0	1/1:2,18:20:54.12:550,54,0	1/1:6,13:19:45.07:451,45,0	0/0:23,0:23:48.15:0,48,593	0/0:25,0:25:75.24:0,75,943	0/0:9,0:9:27.09:0,27,340	0/0:19,0:19:51.16:0,51,641	0/0:23,0:23:63.20:0,63,792	0/0:8,0:8:24.08:0,24,301	0/0:30,0:30:72.23:0,72,906	0/0:22,0:22:57.17:0,57,705	0/0:16,0:16:48.14:0,48,585	0/0:14,0:14:36.11:0,36,448
chr10	52976254	.	AG	A	3654.01	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=4.780;DP=524;FS=1.890;HRun=1;HaplotypeScore=93.3406;InbreedingCoeff=0.9944;MQ=80.77;MQ0=0;MQRankSum=-7.746;QD=39.29;ReadPosRankSum=-0.289;VQSLOD=3.7865;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,14:17:51.16:693,51,0	1/1:1,8:9:27.09:376,27,0	0/0:24,0:24:39.60:0,40,603	0/0:7,0:7:17.81:0,18,192	0/0:32,0:32:93.29:0,93,1293	0/0:27,0:27:78.19:0,78,1078	0/0:14,0:14:39.13:0,39,561	0/0:25,0:25:55.76:0,56,916	0/0:17,0:17:47.95:0,48,664	0/0:29,0:29:80.57:0,81,1265	0/0:29,0:29:84.28:0,84,1211	0/0:15,0:15:45.14:0,45,696	0/0:15,0:15:45.15:0,45,717	0/0:22,0:22:65.96:0,66,913	1/1:2,15:17:51.16:690,51,0	1/1:2,14:16:48.14:651,48,0	1/1:2,16:18:44.88:592,45,0	1/1:1,15:16:48.14:652,48,0	0/0:22,0:22:65.97:0,66,675	0/0:30,0:30:89.07:0,89,688	0/0:8,0:8:23.83:0,24,214	0/0:14,0:14:42.14:0,42,671	0/0:22,0:22:66.23:0,66,1052	0/0:13,0:13:39.13:0,39,616	0/0:20,0:20:51.17:0,51,741	0/0:25,0:25:75.25:0,75,1107	0/0:15,0:15:41.46:0,41,324	0/0:6,0:6:15.05:0,15,221
chr10	52976258	.	A	AG	7405.23	PASS	AB=0.885;AC=22;AF=0.393;AN=56;BaseQRankSum=-15.234;DP=536;FS=2.441;HRun=7;HaplotypeScore=83.1614;InbreedingCoeff=0.8380;MQ=77.60;MQ0=0;MQRankSum=3.593;QD=26.73;ReadPosRankSum=-1.464;VQSLOD=4.8701;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:48.36:0,48,343	0/0:9,0:9:23.83:0,24,172	0/1:19,0:19:13.50:14,0,237	0/0:8,0:8:2.08:0,2,75	1/1:4,28:32:55.19:918,55,0	1/1:4,22:26:63.19:761,63,0	1/1:2,14:16:36.11:435,36,0	1/1:4,19:23:48.13:565,48,0	1/1:1,17:18:45.14:543,45,0	1/1:6,27:33:84.17:970,84,0	1/1:2,28:30:81.63:957,82,0	0/0:17,0:17:48.06:0,48,458	0/0:16,0:16:45.06:0,45,430	1/1:1,23:24:63.19:761,63,0	0/0:17,0:17:41.30:0,41,308	0/0:17,0:17:42.56:0,43,300	0/0:16,0:16:39.28:0,39,319	0/0:15,0:15:41.97:0,42,360	0/0:6,0:20:29.27:0,29,91	0/0:3,0:31:58.79:0,59,189	0/0:1,0:7:12.22:0,12,36	0/0:14,0:14:42.05:0,42,400	0/0:25,0:25:69.09:0,69,656	0/0:13,0:13:36.06:0,36,348	1/1:1,19:20:48.15:579,48,0	1/1:3,23:26:69.16:806,69,0	0/0:2,0:15:24.44:0,24,72	0/1:7,3:10:5.45:97,0,5
chr10	52976295	.	TTA	T	2912.47	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=6.594;DP=538;FS=8.322;HRun=0;HaplotypeScore=93.2918;InbreedingCoeff=0.9976;MQ=72.18;MQ0=1;MQRankSum=-6.832;QD=38.83;ReadPosRankSum=1.207;VQSLOD=5.5522;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,25:27:69.22:1026,69,0	1/1:0,9:9:27.09:411,27,0	0/0:9,0:9:23.89:0,24,320	0/0:14,0:13:27.16:0,27,314	0/0:30,0:30:90.27:0,90,1483	0/0:24,0:24:69.19:0,69,1109	0/0:16,0:16:45.15:0,45,777	0/0:14,0:14:42.13:0,42,691	0/0:21,0:21:60.16:0,60,955	0/0:31,0:31:93.30:0,93,1561	0/0:25,0:25:75.26:0,75,1270	0/0:19,0:19:54.17:0,54,907	0/0:17,0:17:48.16:0,48,830	0/0:26,0:26:72.16:0,72,1199	1/1:4,11:15:45.11:607,45,0	1/1:2,21:23:69.23:1028,69,0	0/0:17,0:17:45.12:0,45,721	0/0:22,0:22:63.07:0,63,994	0/0:14,0:14:42.12:0,42,641	0/0:29,0:29:84.23:0,84,1368	0/0:7,0:7:21.07:0,21,363	0/0:14,0:14:39.13:0,39,662	0/0:25,0:25:72.12:0,72,1127	0/0:18,0:18:54.14:0,54,851	0/0:17,0:17:51.15:0,51,827	0/0:26,0:26:75.21:0,75,1214	0/0:15,0:15:39.09:0,39,617	0/0:13,0:13:36.12:0,36,622
chr10	52976935	.	T	TGCCAA	14177	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-5.999;DP=670;FS=7.779;HRun=0;HaplotypeScore=129.2032;InbreedingCoeff=0.9998;MQ=62.25;MQ0=0;MQRankSum=-12.143;QD=60.33;ReadPosRankSum=-0.880;VQSLOD=5.2255;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,22:34:81.19:2245,81,0	1/1:4,5:9:27.01:662,27,0	0/0:16,0:15:41.73:0,42,765	0/0:26,0:26:63.15:0,63,1472	0/0:25,0:25:75.24:0,75,1503	0/0:31,0:31:78.23:0,78,1532	0/0:30,0:30:72.14:0,72,1408	0/0:24,0:24:63.22:0,63,1343	0/0:12,0:12:36.12:0,36,755	0/0:29,0:29:75.25:0,75,1557	0/0:29,0:29:84.29:0,84,1791	0/0:19,0:18:48.16:0,48,1010	0/0:33,0:33:87.22:0,87,1711	0/0:28,0:28:75.26:0,75,1575	1/1:3,28:28:48.08:1416,48,0	1/1:2,17:19:48.16:1445,48,0	1/1:2,27:32:69.71:2161,70,0	1/1:9,18:26:57.15:1668,57,0	1/1:4,14:21:54.19:1598,54,0	1/1:4,13:21:48.13:1178,48,0	1/1:7,16:25:41.97:813,42,0	0/0:20,0:20:57.20:0,57,1215	0/0:19,0:19:54.19:0,54,1122	0/0:32,0:32:84.23:0,84,1706	0/0:17,0:17:48.16:0,48,1009	0/0:31,0:31:90.29:0,90,1845	1/1:3,10:15:33.11:993,33,0	0/0:14,0:14:42.14:0,42,877
chr10	52977053	.	CA	C	2432.91	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=3.266;DP=558;FS=3.467;HRun=10;HaplotypeScore=73.4646;InbreedingCoeff=0.9823;MQ=59.74;MQ0=1;MQRankSum=-1.048;QD=20.11;ReadPosRankSum=2.860;VQSLOD=4.7721;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,21:23:62.99:547,63,0	1/1:0,8:8:20.99:182,21,0	0/0:8,0:6:13.66:0,14,114	0/0:10,0:9:14.33:0,14,108	0/0:29,0:29:72.18:0,72,788	0/0:19,0:19:48.11:0,48,522	0/0:11,0:12:32.88:0,33,333	0/0:23,0:23:54.13:0,54,584	0/0:17,0:17:19.30:0,19,423	0/0:24,0:24:57.07:0,57,614	0/0:24,0:24:51.14:0,51,564	0/0:9,1:10:27.07:0,27,299	0/0:22,0:22:63.17:0,63,692	0/0:15,0:15:39.11:0,39,431	1/1:0,14:14:41.99:365,42,0	1/1:4,16:20:47.99:417,48,0	1/1:6,25:32:68.01:579,68,0	1/1:4,20:24:55.71:531,56,0	0/0:17,1:18:25.07:0,25,494	0/0:18,0:19:56.98:0,57,604	0/0:7,0:7:14.99:0,15,152	0/0:18,0:18:48.13:0,48,531	0/0:16,1:17:22.06:0,22,464	0/0:22,1:23:34.10:0,34,597	0/0:36,2:37:15.35:0,15,837	0/0:30,1:32:52.15:0,52,802	0/0:30,2:33:31.82:0,32,753	0/0:19,0:19:54.08:0,54,559
chr10	52977127	.	A	ATG	17674.26	PASS	AB=0.563;AC=40;AF=0.714;AN=56;BaseQRankSum=2.604;DP=570;FS=0.000;HRun=0;HaplotypeScore=95.2655;InbreedingCoeff=0.8185;MQ=69.35;MQ0=1;MQRankSum=-5.241;QD=39.36;ReadPosRankSum=2.900;VQSLOD=6.9054;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,14:21:13:762,13,0	1/1:2,8:10:21.07:351,21,0	0/0:28,0:27:50.83:0,51,622	0/0:17,0:17:38.79:0,39,468	1/1:4,28:32:72.25:1200,72,0	1/1:2,22:24:63.22:1052,63,0	1/1:2,16:18:48.16:800,48,0	1/1:5,19:26:60.15:917,60,0	1/1:3,21:24:63.21:1039,63,0	1/1:0,17:17:42.14:702,42,0	1/1:2,14:16:39.13:652,39,0	0/0:19,0:19:57.16:0,57,698	0/0:18,0:18:42.12:0,42,520	1/1:3,22:26:60.20:988,60,0	1/1:2,20:22:60.18:973,60,0	1/1:5,24:29:69.24:1154,69,0	1/1:5,18:23:60.20:996,60,0	1/1:5,11:16:39.10:623,39,0	1/1:5,17:22:53.97:829,54,0	1/1:4,13:16:33.11:550,33,0	0/1:1,6:7:19.71:232,0,20	0/0:8,0:8:15.05:0,15,190	0/0:20,0:20:48.13:0,48,583	0/0:11,0:11:33.11:0,33,420	1/1:3,21:24:54.18:903,54,0	1/1:2,26:28:78.27:1294,78,0	0/1:6,14:20:28.20:605,0,28	1/1:5,20:26:63.22:1052,63,0
chr10	52977165	.	ATTTAGTT	A	1629.33	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=5.973;DP=524;FS=0.000;HRun=0;HaplotypeScore=194.5366;InbreedingCoeff=0.8128;MQ=62.15;MQ0=0;MQRankSum=-7.484;QD=25.46;ReadPosRankSum=-2.961;VQSLOD=2.8512;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:24:3.23:3,0,1734	0/0:11,0:11:24.55:0,25,711	0/0:5,0:5:9.49:0,9,161	0/0:8,0:9:17.96:0,18,164	0/0:25,0:25:48.42:0,48,2086	0/0:21,0:21:63.22:0,63,1890	0/0:19,0:19:54.18:0,54,1604	0/0:42,0:42:95.30:0,95,3501	0/0:16,0:16:45.15:0,45,1385	0/0:19,0:19:57.20:0,57,1719	0/0:18,0:18:51.65:0,52,1532	0/0:19,0:19:57.17:0,57,2146	0/0:17,0:17:51.18:0,51,1966	0/0:27,0:27:43.98:0,44,1978	0/0:22,0:22:11.57:0,12,1720	0/0:28,0:28:41.37:0,41,2182	0/0:25,0:25:53.36:0,53,2232	0/0:19,0:19:35.30:0,35,1571	1/1:7,9:16:33.73:611,34,0	1/1:4,8:10:29.95:501,30,0	0/0:2,0:2:0.47:0,0,1	0/0:15,0:15:39.13:0,39,1570	0/0:21,0:21:60.19:0,60,2273	0/0:10,0:10:30.08:0,30,1033	0/0:20,0:20:11.78:0,12,1325	0/0:25,0:25:28.66:0,29,2014	1/1:2,10:12:33.96:657,34,0	0/0:25,0:25:75.26:0,75,2264
chr10	52977175	.	TTGTGTA	T	1339.18	PASS	AC=6;AF=0.111;AN=54;BaseQRankSum=8.505;DP=499;FS=3.784;HRun=0;HaplotypeScore=176.7083;InbreedingCoeff=0.9844;MQ=66.78;MQ0=0;MQRankSum=-7.955;QD=49.60;ReadPosRankSum=3.394;VQSLOD=3.5252;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:60.68:0,61,2203	0/0:9,0:9:21.07:0,21,723	0/0:4,0:4:11.98:0,12,217	0/0:11,0:11:26.81:0,27,444	0/0:24,0:24:72.21:0,72,2418	0/0:21,0:21:63.22:0,63,2342	0/0:20,0:20:60.08:0,60,1733	0/0:41,0:41:99:0,123,4152	0/0:17,0:17:51.18:0,51,1871	0/0:23,0:23:66.22:0,66,2341	0/0:18,0:18:54.19:0,54,1935	0/0:19,0:19:57.19:0,57,2026	0/0:15,0:15:45.14:0,45,1544	0/0:26,0:26:69.18:0,69,2175	0/0:20,0:20:60.19:0,60,2159	0/0:28,0:28:81.27:0,81,2832	0/0:24,0:24:72.24:0,72,2531	0/0:19,0:19:57.18:0,57,2057	1/1:0,9:9:27.09:520,27,0	1/1:0,8:7:21.07:395,21,0	./.	0/0:17,0:17:45.15:0,45,1629	0/0:21,0:21:57.20:0,57,2043	0/0:8,0:8:24.08:0,24,885	0/0:19,0:19:51.16:0,51,1783	0/0:26,0:26:78.27:0,78,2876	1/1:0,10:10:30.10:565,30,0	0/0:21,0:21:63.15:0,63,1998
chr10	52977345	.	ATTGTTTAC	A	18990.46	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=12.238;DP=511;FS=18.447;HRun=0;HaplotypeScore=143.9624;InbreedingCoeff=0.9535;MQ=63.06;MQ0=0;MQRankSum=-10.700;QD=47.48;ReadPosRankSum=0.667;VQSLOD=3.3127;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,13:16:24.08:584,24,0	1/1:1,10:11:23.91:613,24,0	0/0:7,0:5:15.03:0,15,271	0/0:18,0:16:27.27:0,27,584	1/1:4,23:26:66.22:1572,66,0	1/1:3,12:15:24.08:632,24,0	1/1:6,9:15:9.03:237,9,0	1/1:8,24:32:72.17:1408,72,0	1/1:0,20:20:48.16:1265,48,0	1/1:8,15:23:42.14:1036,42,0	1/1:2,19:21:51.16:1150,51,0	0/0:18,0:18:48.15:0,48,1874	0/0:17,0:17:45.15:0,45,1888	1/1:6,19:25:36.12:949,36,0	1/1:5,17:22:39.13:1026,39,0	1/1:3,14:17:39.13:1027,39,0	1/1:1,7:8:9.03:237,9,0	1/1:7,6:13:9.03:194,9,0	1/1:3,10:13:30.10:683,30,0	1/1:5,15:20:45.15:1147,45,0	1/1:4,9:13:9.03:229,9,0	0/0:19,0:19:51.14:0,51,1788	0/0:18,0:18:51.16:0,51,1967	0/0:14,0:14:36.12:0,36,1408	1/1:2,33:35:78.27:2056,78,0	1/1:0,15:16:48.14:1127,48,0	1/1:4,20:24:48.16:1265,48,0	1/1:4,10:14:21.07:554,21,0
chr10	52979617	.	TA	T	2507	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=2.934;DP=514;FS=0.479;HRun=11;HaplotypeScore=62.2873;InbreedingCoeff=0.8789;MQ=55.95;MQ0=8;MQRankSum=0.930;QD=15.29;ReadPosRankSum=1.743;VQSLOD=4.2826;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:63.40:0,63,636	0/0:10,0:9:18.03:0,18,185	0/0:3,0:3:6.01:0,6,60	0/1:7,0:6:11.07:11,0,82	1/1:3,28:31:79.93:646,80,0	1/1:4,8:12:23.62:197,24,0	1/1:3,6:7:14.97:123,15,0	1/1:13,20:32:58.29:456,58,0	1/1:1,15:16:35.20:294,35,0	0/0:11,0:23:51.44:0,51,314	0/0:7,0:14:28.72:0,29,153	0/0:13,1:14:11.45:0,11,327	0/0:27,1:28:44.34:0,44,609	1/1:4,22:26:53.93:443,54,0	0/0:20,0:20:57.14:0,57,601	0/0:15,1:15:17.46:0,17,391	0/0:17,0:17:45.10:0,45,472	0/0:25,0:26:66:0,66,686	0/0:11,0:16:32.45:0,32,206	0/0:8,0:26:50.81:0,51,275	0/0:5,0:14:17.19:0,17,94	0/0:19,0:19:45.11:0,45,479	0/0:17,0:17:14.80:0,15,346	0/0:14,1:15:17.46:0,17,391	1/1:3,24:28:58.46:535,58,0	0/0:11,0:20:35.06:0,35,217	0/0:2,0:15:28.48:0,28,143	0/0:1,0:7:20.10:0,20,109
chr10	52979833	.	C	CG	14855.30	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=13.777;DP=671;FS=39.014;HRun=0;HaplotypeScore=106.3261;InbreedingCoeff=0.9795;MQ=76.68;MQ0=0;MQRankSum=-4.766;QD=29.83;ReadPosRankSum=4.746;VQSLOD=2.6108;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,45:46:99:1348,113,0	1/1:1,3:4:7.28:104,7,0	0/0:16,0:16:39.10:0,39,516	0/0:22,0:21:58.70:0,59,752	1/1:2,18:20:43.30:549,43,0	1/1:1,19:20:54.16:635,54,0	1/1:1,19:20:43.45:527,43,0	1/1:1,23:24:61.37:705,61,0	1/1:1,21:22:57.08:663,57,0	1/1:0,34:34:99:1127,102,0	1/1:1,12:13:30.09:355,30,0	0/0:26,0:26:78.23:0,78,1051	0/0:33,0:33:96.30:0,96,1322	1/1:1,27:28:67.43:798,67,0	1/1:1,34:35:97.70:1151,98,0	1/1:0,31:31:75.23:891,75,0	1/1:2,28:30:72.84:880,73,0	1/1:1,19:20:54.16:640,54,0	1/1:2,19:21:56.31:645,56,0	1/1:1,15:16:41.85:436,42,0	1/1:1,30:31:81.24:944,81,0	0/0:22,0:22:66.16:0,66,849	0/0:20,0:20:57.18:0,57,780	0/0:34,0:34:99:0,102,1405	1/1:5,12:17:36.89:457,37,0	1/1:1,28:29:80.23:921,80,0	1/1:2,29:31:76.50:943,77,0	1/1:0,6:6:12.03:137,12,0
chr10	52980980	.	ACCAAG	A	3712.53	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=11.963;DP=638;FS=4.771;HRun=0;HaplotypeScore=129.7178;InbreedingCoeff=0.9975;MQ=81.94;MQ0=0;MQRankSum=-12.218;QD=43.17;ReadPosRankSum=1.938;VQSLOD=3.7518;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,17:23:41.95:727,42,0	1/1:0,9:9:18.04:389,18,0	0/0:19,0:19:54.14:0,54,1431	0/0:26,0:26:51.30:0,51,1903	0/0:32,0:32:93.30:0,93,2811	0/0:28,0:28:84.26:0,84,2432	0/0:15,0:15:45.15:0,45,1317	0/0:37,0:37:96.30:0,96,2760	0/0:14,0:14:42.13:0,42,1261	0/0:29,0:29:84.29:0,84,2582	0/0:20,0:20:57.18:0,57,1704	0/0:17,0:17:48.16:0,48,1455	0/0:27,0:27:81.26:0,81,2456	0/0:32,0:32:96.33:0,96,2987	1/1:1,29:30:66.23:1427,66,0	1/1:4,20:24:54.19:1169,54,0	0/0:32,0:32:93.25:0,93,2772	0/0:13,0:13:36.12:0,36,1124	0/0:20,0:20:54.18:0,54,1596	0/0:23,0:23:66.21:0,66,1908	0/0:23,0:23:69.22:0,69,2069	0/0:11,0:11:30.10:0,30,927	0/0:19,0:19:54.17:0,54,1584	0/0:19,0:19:57.20:0,57,1766	0/0:24,0:24:72.24:0,72,2182	0/0:23,0:23:69.24:0,69,2176	0/0:34,0:34:96.33:0,96,2983	0/0:14,0:14:42.14:0,42,1299
chr10	52981744	.	T	TA	7195.57	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=2.349;DP=729;FS=1.022;HRun=2;HaplotypeScore=96.5097;InbreedingCoeff=0.9970;MQ=83.29;MQ0=0;MQRankSum=-1.267;QD=38.89;ReadPosRankSum=-1.532;VQSLOD=4.4292;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,132,1667	0/0:12,0:12:36.09:0,36,445	0/0:17,0:17:25.41:0,25,541	0/0:29,0:30:62.41:0,62,844	0/0:40,0:40:99:0,117,1409	0/0:25,0:25:75.21:0,75,942	0/0:31,0:31:93.29:0,93,1193	0/0:42,0:41:99:0,117,1411	0/0:29,0:29:84.26:0,84,1073	1/1:5,17:22:66.17:898,66,0	1/1:6,14:20:54.11:741,54,0	0/0:24,0:24:72.22:0,72,921	0/0:33,0:33:96.29:0,96,1222	0/0:25,0:25:69.20:0,69,867	0/0:26,0:26:69.21:0,69,880	0/0:27,0:27:78.25:0,78,1004	0/0:33,0:33:99:0,99,1235	0/0:18,0:18:51.17:0,51,661	1/1:7,18:24:69.14:929,69,0	1/1:2,26:28:82.15:1192,82,0	1/1:1,34:35:87.28:1262,87,0	0/0:17,0:17:51.17:0,51,661	0/0:15,0:15:39.10:0,39,478	0/0:28,0:28:84.25:0,84,1063	0/0:20,0:20:60.18:0,60,757	1/1:6,18:24:33.27:921,33,0	1/1:5,21:26:75.14:1030,75,0	1/1:0,5:5:15.05:222,15,0
chr10	52981814	.	T	TAAC	18940.35	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-14.610;DP=846;FS=9.491;HRun=0;HaplotypeScore=132.0736;InbreedingCoeff=0.9986;MQ=81.93;MQ0=0;MQRankSum=-3.175;QD=52.91;ReadPosRankSum=1.302;VQSLOD=6.8873;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,52:56:99:2738,123,0	1/1:1,13:14:39.13:867,39,0	0/0:25,0:25:60.17:0,60,937	0/0:29,0:29:51.56:0,52,819	0/0:33,0:33:87.28:0,87,1396	0/0:34,0:34:93.26:0,93,1442	0/0:32,0:32:93.32:0,93,1515	0/0:37,0:37:87.27:0,87,1337	0/0:39,0:39:99:0,108,1737	1/1:4,19:23:60.21:1297,60,0	1/1:8,22:31:63.17:1320,63,0	0/0:21,0:21:54.18:0,54,882	0/0:33,0:33:81.21:0,81,1245	0/0:34,0:34:99:0,99,1614	1/1:1,42:44:99:2678,120,0	1/1:3,24:28:17.27:1357,17,0	0/0:23,0:23:69.24:0,69,1122	0/0:26,0:26:75.24:0,75,1200	1/1:4,26:30:81.26:1674,81,0	1/1:6,17:24:57.14:1151,57,0	1/1:7,23:30:60.15:1250,60,0	0/0:31,0:31:93.30:0,93,1494	0/0:30,0:30:87.28:0,87,1394	0/0:31,0:31:90.31:0,90,1470	0/0:30,0:30:84.25:0,84,1301	1/1:6,17:23:66.23:1423,66,0	1/1:5,37:42:99:2515,117,0	1/1:0,10:11:30.10:669,30,0
chr10	52983242	.	A	AT	7919.24	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=6.117;DP=819;FS=0.294;HRun=0;HaplotypeScore=121.7959;InbreedingCoeff=0.9927;MQ=64.06;MQ0=4;MQRankSum=5.541;QD=38.82;ReadPosRankSum=0.878;VQSLOD=4.2837;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:90.29:0,90,1232	0/0:9,0:9:27.09:0,27,377	0/0:33,0:28:56.81:0,57,972	0/0:25,0:20:53.66:0,54,685	1/1:0,38:38:99:1518,110,0	1/1:3,28:31:87.28:1214,87,0	1/1:0,21:21:63.21:892,63,0	1/1:1,32:32:89.94:1232,90,0	1/1:0,24:24:69.23:977,69,0	0/0:32,0:32:96.31:0,96,1327	0/0:26,0:26:78.26:0,78,1091	0/0:39,0:39:99:0,114,1575	0/0:33,1:34:60.58:0,61,1324	1/1:1,30:31:79.15:1105,79,0	0/0:43,0:43:99:0,129,1804	0/0:32,0:32:96.31:0,96,1326	0/0:36,0:36:13.87:0,14,111	0/0:33,0:33:14.84:0,15,109	0/0:19,0:18:50.79:0,51,710	0/0:38,0:38:99:0,114,1555	0/0:32,0:32:93.31:0,93,1299	0/0:31,0:31:90.30:0,90,1257	0/0:29,0:29:84.28:0,84,1174	0/0:24,0:24:66.19:0,66,923	1/1:1,25:26:69.23:981,69,0	0/0:29,0:29:87.28:0,87,1197	0/0:33,0:33:99:0,99,1362	0/0:8,0:8:24.08:0,24,332
chr10	52983243	.	C	CT	10890.59	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=2.575;DP=826;FS=2.276;HRun=1;HaplotypeScore=112.3508;InbreedingCoeff=0.9986;MQ=63.23;MQ0=4;MQRankSum=-0.901;QD=39.60;ReadPosRankSum=0.921;VQSLOD=4.7123;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:87.28:0,87,1128	0/0:9,0:9:27.09:0,27,350	0/0:32,0:27:66.42:0,66,941	0/0:26,0:20:52.38:0,52,613	1/1:38,0:38:99:1594,111,0	1/1:32,0:32:90.28:1270,90,0	1/1:21,0:21:63.21:914,63,0	1/1:34,0:33:93.29:1297,93,0	1/1:24,0:24:69.23:1000,69,0	0/0:34,0:34:90.29:0,90,1168	0/0:27,0:27:78.24:0,78,1000	0/0:40,0:40:99:0,114,1458	0/0:34,0:34:58.58:0,59,1238	1/1:31,0:31:78.26:1133,78,0	0/0:43,0:43:99:0,129,1660	0/0:32,0:32:96.31:0,96,1246	1/1:1,34:35:74.34:1330,74,0	1/1:2,31:33:57.44:1355,57,0	0/0:20,0:19:53.79:0,54,684	0/0:38,0:38:99:0,111,1409	0/0:33,0:33:93.24:0,93,1173	0/0:31,0:31:87.28:0,87,1129	0/0:29,0:29:87.27:0,87,1115	0/0:24,0:24:66.19:0,66,852	1/1:27,0:27:69.23:999,69,0	0/0:28,0:28:84.27:0,84,1089	0/0:32,0:32:93.30:0,93,1206	0/0:8,0:8:18.06:0,18,234
chr10	52983747	.	T	TG	13575.95	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=-9.563;DP=532;FS=1.221;HRun=4;HaplotypeScore=58.6355;InbreedingCoeff=0.9694;MQ=82.89;MQ0=0;MQRankSum=-7.019;QD=34.81;ReadPosRankSum=2.576;VQSLOD=5.4514;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,16:20:39.13:533,39,0	1/1:0,2:2:6.02:82,6,0	0/0:20,0:19:50.45:0,50,585	0/0:28,0:28:63.99:0,64,696	1/1:1,17:18:51.17:697,51,0	1/1:1,18:19:48.16:651,48,0	1/1:5,19:24:48.16:656,48,0	1/1:5,35:40:99:1323,99,0	1/1:1,16:17:36.59:493,37,0	1/1:0,10:10:30.10:410,30,0	1/1:1,10:11:21.07:287,21,0	0/0:23,0:23:63.18:0,63,714	0/0:19,0:19:57.16:0,57,646	1/1:2,19:21:54.18:739,54,0	1/1:1,21:22:57.19:780,57,0	1/1:1,18:19:57.19:779,57,0	1/1:2,21:23:60.20:820,60,0	1/1:0,10:10:30.10:407,30,0	1/1:1,13:14:39.13:533,39,0	1/1:1,21:22:23.15:704,23,0	1/1:1,25:26:75.25:1026,75,0	0/0:18,0:18:54.15:0,54,610	0/0:16,0:16:45.13:0,45,510	0/0:18,0:18:54.15:0,54,612	1/1:1,24:25:63.20:849,63,0	1/1:3,25:28:75.25:1026,75,0	1/1:0,16:16:48.16:656,48,0	1/1:0,3:3:9.03:123,9,0
chr10	52984062	.	GC	G	6113.40	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=6.862;DP=661;FS=11.277;HRun=1;HaplotypeScore=83.2100;InbreedingCoeff=0.9801;MQ=82.83;MQ0=0;MQRankSum=-2.345;QD=38.94;ReadPosRankSum=0.557;VQSLOD=4.5520;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,138,2155	0/0:6,0:6:18.04:0,18,264	0/0:17,0:17:48.13:0,48,736	0/0:19,0:19:29.31:0,29,689	0/0:22,0:22:63.20:0,63,981	0/0:21,0:21:63.21:0,63,1003	0/0:32,0:32:96.33:0,96,1526	0/0:33,0:33:99:0,99,1572	0/0:30,0:30:90.31:0,90,1432	1/1:0,29:29:87.29:1202,87,0	1/1:0,12:12:30.10:409,30,0	0/0:28,0:28:84.29:0,84,1343	0/0:38,0:38:99:0,114,1785	0/0:28,0:28:84.29:0,84,1343	0/0:18,0:18:54.18:0,54,863	0/0:27,0:27:81.28:0,81,1295	0/0:24,0:24:69.24:0,69,1103	0/0:22,0:22:66.23:0,66,1055	1/1:0,23:23:69.20:939,69,0	1/1:0,15:15:39.13:545,39,0	1/1:0,21:21:54.18:755,54,0	0/0:15,0:15:45.14:0,45,695	0/0:8,0:8:21.07:0,21,327	0/0:39,0:39:99:0,117,1837	0/0:30,0:30:81.28:0,81,1281	1/1:0,25:25:75.25:1045,75,0	1/1:0,30:30:81.27:1133,81,0	1/1:0,2:2:6.02:84,6,0
chr10	52984611	.	T	TA	15082.61	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=17.821;DP=734;FS=1.885;HRun=0;HaplotypeScore=118.5395;InbreedingCoeff=0.9980;MQ=70.98;MQ0=0;MQRankSum=-3.210;QD=43.22;ReadPosRankSum=0.143;VQSLOD=4.2322;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,41:41:99:1917,120,0	1/1:0,10:10:30.10:478,30,0	0/0:18,0:18:47.89:0,48,549	0/0:15,0:14:19.51:0,20,404	1/1:1,27:28:78.26:1221,78,0	1/1:0,23:23:66.23:1055,66,0	1/1:1,23:24:63.13:973,63,0	1/1:2,37:39:99:1747,114,0	1/1:0,27:27:75.26:1196,75,0	0/0:39,0:39:99:0,117,1610	0/0:12,0:12:36.12:0,36,503	0/0:36,0:36:99:0,105,1467	0/0:42,0:42:99:0,126,1758	1/1:2,26:28:81.26:1271,81,0	1/1:0,37:37:90.31:1435,90,0	1/1:1,33:34:87.23:1358,87,0	1/1:0,32:32:90.31:1426,90,0	1/1:0,9:9:18.06:288,18,0	0/0:16,0:16:42.12:0,42,553	0/0:25,0:25:72.24:0,72,1006	0/0:30,0:30:87.27:0,87,1197	0/0:19,0:19:57.18:0,57,780	0/0:25,0:25:75.25:0,75,1048	0/0:20,0:20:60.20:0,60,838	1/1:2,15:16:45.15:719,45,0	0/0:34,0:34:99:0,99,1344	0/0:43,0:43:99:0,129,1800	0/0:11,0:11:33.11:0,33,461
chr10	52984735	.	AC	A	13273.59	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=19.568;DP=731;FS=1.882;HRun=1;HaplotypeScore=134.5713;InbreedingCoeff=0.9952;MQ=79.41;MQ0=0;MQRankSum=-3.018;QD=38.25;ReadPosRankSum=0.613;VQSLOD=4.4768;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,35:35:99:1466,105,0	1/1:0,8:8:24.04:314,24,0	0/0:20,0:20:57.17:0,57,823	0/0:17,0:17:47.99:0,48,697	1/1:0,17:17:45.15:625,45,0	1/1:0,15:15:45.15:629,45,0	1/1:1,18:19:57.18:777,57,0	1/1:0,39:39:99:1522,114,0	1/1:0,26:25:60.20:839,60,0	0/0:29,0:29:87.29:0,87,1362	0/0:15,0:15:45.15:0,45,714	0/0:40,0:40:99:0,117,1861	0/0:42,0:42:99:0,126,1998	1/1:0,34:34:93.31:1301,93,0	1/1:0,46:46:99:1716,123,0	1/1:0,43:43:99:1636,117,0	1/1:2,27:29:84.25:1153,84,0	1/1:0,10:10:24.08:336,24,0	0/0:18,0:18:54.18:0,54,860	0/0:30,0:30:90.31:0,90,1438	0/0:40,0:40:99:0,120,1895	0/0:18,0:18:51.17:0,51,813	0/0:19,0:19:57.19:0,57,906	0/0:39,0:39:99:0,117,1867	1/1:0,26:26:69.23:961,69,0	0/0:22,0:22:63.21:0,63,1008	0/0:31,0:30:93.32:0,93,1477	0/0:4,0:4:12.04:0,12,190
chr10	52984785	.	TATAG	T	1430.75	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.511;DP=829;FS=5.095;HRun=0;HaplotypeScore=199.3943;InbreedingCoeff=0.8998;MQ=86.47;MQ0=0;MQRankSum=-6.030;QD=44.71;ReadPosRankSum=1.074;VQSLOD=3.8814;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,108,3064	0/0:8,0:8:24.08:0,24,674	0/0:27,0:27:81.23:0,81,2133	0/0:29,0:29:84.29:0,84,2356	0/0:27,0:27:75.26:0,75,2172	0/0:25,0:25:72.23:0,72,2002	0/0:25,0:25:72.25:0,72,2047	0/0:33,0:33:99:0,99,2661	0/0:30,0:30:87.30:0,87,2519	0/0:41,0:41:99:0,120,3461	0/0:21,0:21:63.22:0,63,1822	0/0:42,0:42:99:0,126,3551	0/0:45,0:45:99:0,132,3720	0/0:34,0:34:99:0,99,2854	0/0:37,0:37:99:0,108,3045	0/0:47,0:47:99:0,132,3802	1/1:0,27:27:63.22:1296,63,0	1/1:1,4:5:12.04:252,12,0	0/0:27,0:27:78.27:0,78,2260	0/0:35,0:35:99:0,105,2992	0/0:50,0:50:99:0,151,4255	0/0:20,0:20:57.20:0,57,1610	0/0:24,0:24:72.23:0,72,2000	0/0:37,0:37:99:0,111,3196	0/0:25,0:25:66.23:0,66,1828	0/0:29,0:29:87.30:0,87,2520	0/0:41,0:39:99:0,120,3360	0/0:1,0:1:3.01:0,3,87
chr10	52985034	.	ATG	A	14264.05	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=20.118;DP=780;FS=1.882;HRun=0;HaplotypeScore=116.3256;InbreedingCoeff=0.9958;MQ=90.27;MQ0=0;MQRankSum=-3.731;QD=37.44;ReadPosRankSum=2.875;VQSLOD=6.6498;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,65:66:99:2711,178,0	1/1:0,6:6:12.04:184,12,0	0/0:30,0:30:81.28:0,81,1546	0/0:33,0:33:96.25:0,96,1698	1/1:0,28:28:66.22:1011,66,0	1/1:0,21:21:51.17:781,51,0	1/1:1,30:31:69.23:1057,69,0	1/1:1,27:28:81.23:1174,81,0	1/1:2,31:33:81.28:1240,81,0	0/0:28,0:28:84.29:0,84,1623	0/0:23,0:23:69.19:0,69,1295	0/0:32,0:32:93.32:0,93,1783	0/0:33,0:33:99:0,99,1858	1/1:1,19:20:39.13:597,39,0	1/1:1,26:27:63.21:965,63,0	1/1:2,34:36:90.31:1376,90,0	1/1:0,33:33:75.25:1148,75,0	1/1:0,18:18:45.15:689,45,0	0/0:20,0:20:60.21:0,60,1160	0/0:28,0:28:81.28:0,81,1546	0/0:23,0:23:69.24:0,69,1324	0/0:21,0:21:63.22:0,63,1210	0/0:22,0:22:63.22:0,63,1212	0/0:38,0:37:99:0,114,2182	1/1:2,32:34:87.30:1332,87,0	0/0:27,0:27:75.26:0,75,1423	0/0:25,0:25:72.25:0,72,1370	0/0:16,0:16:48.16:0,48,926
chr10	52985269	.	CCTCTGT	C	10005.42	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=14.083;DP=617;FS=4.425;HRun=0;HaplotypeScore=167.8240;InbreedingCoeff=0.9848;MQ=79.52;MQ0=2;MQRankSum=-15.272;QD=37.47;ReadPosRankSum=0.606;VQSLOD=4.7671;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:11,9:19:27.09:517,27,0	1/1:5,11:16:33.11:696,33,0	0/0:37,0:32:12:0,12,702	0/0:27,0:26:20.34:0,20,493	1/1:7,19:26:54.18:1071,54,0	1/1:6,14:20:48.15:973,48,0	1/1:9,8:17:27.08:530,27,0	1/1:21,3:24:12.03:218,12,0	1/1:10,12:21:42.14:836,42,0	0/0:26,0:26:63.21:0,63,1966	0/0:16,0:16:36.12:0,36,1131	0/0:24,0:24:66.23:0,66,2182	0/0:17,0:17:36.11:0,36,1076	1/1:5,21:26:57.20:1202,57,0	1/1:5,18:23:63.22:1328,63,0	1/1:7,16:23:54.19:1125,54,0	1/1:14,8:22:18.06:380,18,0	1/1:6,7:12:24.01:412,24,0	0/0:14,0:14:12.04:0,12,393	0/0:24,0:24:51.16:0,51,1560	0/0:21,0:21:42.14:0,42,1391	0/0:27,0:27:75.24:0,75,2387	0/0:19,0:19:42.14:0,42,1386	0/0:18,0:18:39.12:0,39,1212	1/1:6,9:15:36.11:719,36,0	0/0:28,0:28:63.22:0,63,2061	0/0:36,0:36:81.25:0,81,2520	0/0:15,0:15:42.14:0,42,1382
chr10	52985305	.	A	AC	6715.72	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=12.265;DP=647;FS=10.916;HRun=0;HaplotypeScore=160.4288;InbreedingCoeff=0.9834;MQ=68.27;MQ0=0;MQRankSum=-15.216;QD=39.50;ReadPosRankSum=-4.003;VQSLOD=1.8561;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:69.54:0,70,282	0/0:15,0:15:18.49:0,18,124	0/0:22,0:19:47.31:0,47,667	0/0:15,0:15:30.79:0,31,337	1/1:5,25:30:59.99:871,60,0	1/1:0,25:25:72.24:1114,72,0	1/1:3,19:22:57.04:832,57,0	1/1:5,21:26:75.14:1101,75,0	1/1:3,15:18:50.97:711,51,0	0/0:22,0:22:66.21:0,66,906	0/0:14,0:14:42.14:0,42,584	0/0:27,0:27:81.25:0,81,1096	0/0:17,0:17:48.14:0,48,635	1/1:1,26:27:78.13:1160,78,0	0/0:29,0:29:36.74:0,37,240	0/0:27,0:27:31.64:0,32,214	0/0:19,0:19:9.17:0,9,126	0/0:14,0:13:12.65:0,13,94	0/0:15,0:15:45.15:0,45,626	0/0:28,0:28:81.23:0,81,1076	0/0:24,0:24:72.22:0,72,970	0/0:33,0:33:96.31:0,96,1319	0/0:32,0:32:93.30:0,93,1279	0/0:19,0:19:57.16:0,57,759	1/1:1,20:22:63.12:927,63,0	0/0:23,0:23:66.22:0,66,921	0/0:38,0:38:99:0,111,1512	0/0:15,0:15:45.12:0,45,579
chr10	52985322	.	A	AT	11988	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=12.897;DP=691;FS=3.692;HRun=3;HaplotypeScore=137.5956;InbreedingCoeff=0.9999;MQ=79.50;MQ0=0;MQRankSum=-13.779;QD=37.11;ReadPosRankSum=-3.088;VQSLOD=3.2529;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:2,27:29:78.19:1058,78,0	1/1:2,11:13:33.11:461,33,0	0/0:28,0:28:84.17:0,84,951	0/0:13,0:13:35.12:0,35,384	1/1:2,29:31:74.98:1021,75,0	1/1:1,27:28:75.25:1047,75,0	1/1:3,17:20:51.17:712,51,0	1/1:4,31:35:99:1358,99,0	1/1:1,17:18:51.17:713,51,0	0/0:26,0:26:75.19:0,75,884	0/0:19,0:19:51.14:0,51,601	0/0:26,0:26:72.22:0,72,864	0/0:16,0:16:48.13:0,48,564	1/1:8,18:26:63.21:872,63,0	1/1:1,31:32:90.23:1231,90,0	1/1:0,29:29:87.29:1213,87,0	1/1:3,17:20:51.17:713,51,0	1/1:1,18:19:48.16:671,48,0	0/0:20,0:20:57.15:0,57,663	0/0:28,0:28:84.26:0,84,1008	0/0:22,0:22:63.19:0,63,756	0/0:29,0:29:87.27:0,87,1044	0/0:33,0:33:96.29:0,96,1152	0/0:17,0:17:48.14:0,48,566	1/1:2,21:23:66.22:917,66,0	0/0:30,0:30:90.28:0,90,1080	0/0:44,0:44:99:0,129,1544	0/0:17,0:17:42.13:0,42,504
chr10	52986001	.	G	GCAC	738.86	PASS	AB=1.000;AC=21;AF=0.389;AN=54;BaseQRankSum=8.368;DP=456;FS=4.950;HRun=0;HaplotypeScore=84.2770;InbreedingCoeff=0.6731;MQ=53.28;MQ0=8;MQRankSum=-5.748;QD=8.90;ReadPosRankSum=-3.029;VQSLOD=1.6622;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,0:11:0.47:1,0,0	./.	0/0:29,0:10:1.45:0,1,79	0/0:24,0:12:29.66:0,30,332	1/1:5,0:5:3.01:47,3,0	1/1:3,0:3:0.63:41,1,0	1/1:6,0:6:6.02:86,6,0	1/1:6,0:6:12.04:156,12,0	1/1:6,0:6:11.98:140,12,0	0/0:23,0:23:60.20:0,60,930	0/0:2,0:2:6.02:0,6,95	0/0:29,0:29:75.20:0,75,1132	0/0:17,0:17:48.16:0,48,771	1/1:8,0:8:11.42:107,11,0	0/0:12,0:12:2.31:0,2,16	0/1:7,0:7:32:32,0,37	1/1:2,10:12:5.61:47,6,0	1/1:7,0:7:3.37:40,3,0	0/0:21,0:16:35.99:0,36,502	0/0:7,0:7:18.06:0,18,284	0/0:66,1:66:99:0,153,2394	0/0:15,0:15:34.92:0,35,487	0/0:8,0:8:18.01:0,18,242	0/0:53,0:53:99:0,141,2085	1/1:11,0:11:25.35:220,25,0	0/0:25,0:24:66.19:0,66,993	0/0:20,0:20:57.18:0,57,869	0/0:19,0:19:41.91:0,42,534
chr10	52986098	.	C	CAGCAGCAGT	1819.30	PASS	AB=1.000;AC=19;AF=0.352;AN=54;BaseQRankSum=7.891;DP=489;FS=5.305;HRun=0;HaplotypeScore=160.6603;InbreedingCoeff=0.6075;MQ=46.76;MQ0=14;MQRankSum=-6.015;QD=9.83;ReadPosRankSum=-0.551;VQSLOD=2.0405;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:12:0.47:0,0,1	1/1:6,0:5:8.79:63,9,0	0/0:12,0:5:3:0,3,26	0/0:18,0:11:18.01:0,18,235	./.	0/1:16,0:16:15.08:15,0,61	1/1:44,0:42:34.92:491,35,0	1/1:10,0:9:14.60:215,15,0	1/1:16,0:16:14.64:269,15,0	0/0:14,0:13:17.20:0,17,235	0/0:6,0:6:3:0,3,25	0/0:35,0:35:90.18:0,90,1998	0/0:18,0:18:42.02:0,42,739	1/1:30,0:30:5.46:71,5,0	1/1:7,9:19:2.68:106,3,0	1/1:8,11:23:14.67:505,15,0	0/1:6,0:6:9.97:155,0,10	1/1:5,0:4:4.97:107,5,0	0/0:14,0:11:23.95:0,24,256	0/0:11,0:10:23.93:0,24,381	0/0:64,0:60:69.41:0,69,1271	0/0:8,0:8:3.01:0,3,50	0/0:4,0:4:3:0,3,25	0/0:35,0:35:93.21:0,93,2283	0/1:10,0:9:0:0,0,0	0/0:17,0:17:20.95:0,21,271	0/0:16,0:16:42.08:0,42,906	0/0:10,0:7:18.06:0,18,513
chr10	52986115	.	GCAC	G	884.06	PASS	AB=1.000;AC=22;AF=0.458;AN=48;BaseQRankSum=4.149;DP=434;FS=6.706;HRun=0;HaplotypeScore=88.7571;InbreedingCoeff=0.6059;MQ=45.06;MQ0=21;MQRankSum=-1.283;QD=3.64;ReadPosRankSum=-0.643;VQSLOD=1.1686;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:8,0:8:0:0,0,0	0/0:7,0:6:0.47:0,0,1	./.	./.	./.	0/0:10,0:10:2.36:0,2,3	1/1:37,0:35:0.66:3,1,0	1/1:15,0:11:11.82:77,12,0	1/1:20,0:20:8.14:55,8,0	1/1:8,4:11:12.01:117,12,0	0/0:3,3:6:0.47:0,0,1	0/0:38,0:38:75.01:0,75,887	0/0:17,0:16:44.92:0,45,496	0/1:27,0:26:0.21:14,0,0	0/0:18,0:18:0:0,0,0	1/1:20,0:20:8.99:64,9,0	0/0:5,0:5:0.47:0,0,1	0/0:4,0:2:2.97:0,3,20	./.	1/1:7,0:6:5.38:49,5,0	1/1:31,27:51:2.61:21,3,0	0/0:7,0:5:12.37:0,12,95	0/0:3,0:3:8.98:0,9,72	0/0:33,0:33:57.07:0,57,812	0/0:7,0:6:0.94:0,1,1	1/1:12,0:10:14.76:136,15,0	1/1:16,0:16:33.01:348,33,0	1/1:11,0:8:12.01:145,12,0
chr10	52986157	.	TCACCATCAC	T	1020.74	PASS	AB=1.000;AC=11;AF=0.204;AN=54;BaseQRankSum=6.765;DP=597;FS=16.718;HRun=0;HaplotypeScore=150.2473;InbreedingCoeff=0.5209;MQ=47.55;MQ0=40;MQRankSum=-7.289;QD=11.87;ReadPosRankSum=0.025;VQSLOD=1.7426;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:8,3:9:5.96:108,6,0	1/1:3,1:4:3.01:88,3,0	0/0:28,0:9:27.09:0,27,703	0/0:39,0:12:36.12:0,36,906	./.	0/0:16,0:15:14.34:0,14,133	0/1:24,0:24:10.71:11,0,105	0/1:8,0:4:25.26:25,0,106	0/0:27,0:27:8.92:0,9,73	0/0:24,0:19:57.12:0,57,1645	0/0:12,0:12:21.07:0,21,649	0/0:43,0:43:99:0,126,4737	0/0:22,0:22:60.19:0,60,2295	0/0:25,0:25:5.91:0,6,38	1/1:8,3:10:5.78:123,6,0	1/1:11,9:20:39.06:776,39,0	0/0:6,0:6:17.96:0,18,167	0/1:8,0:8:40.06:40,0,92	0/0:26,0:19:47.54:0,48,1264	0/0:16,0:16:39.60:0,40,1348	0/0:80,0:74:99:0,135,4641	0/0:14,0:12:30.57:0,31,1235	0/0:15,0:13:33.11:0,33,1131	0/0:30,0:30:84.20:0,84,2873	0/0:12,0:9:14.70:0,15,130	0/0:29,0:24:69.09:0,69,2245	0/0:21,0:21:60.68:0,61,2229	0/0:11,0:11:29.97:0,30,762
chr10	52986159	.	ACCATCACCATCATCATCATCG	A	1678.73	PASS	AB=0.679;AC=17;AF=0.315;AN=54;BaseQRankSum=4.955;DP=598;FS=26.102;HRun=0;HaplotypeScore=242.9908;InbreedingCoeff=0.6345;MQ=48.33;MQ0=39;MQRankSum=-8.898;QD=10.97;ReadPosRankSum=-4.177;VQSLOD=0.6274;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,0:7:6.47:94,6,0	1/1:4,0:4:3.01:30,3,0	0/0:31,0:10:30.09:0,30,967	0/0:40,0:13:39.13:0,39,1240	./.	1/1:15,0:14:23.84:286,24,0	1/1:24,0:24:23.47:396,23,0	0/1:6,0:3:63.55:64,0,129	0/1:3,26:29:29.10:43,0,29	0/0:27,0:22:63.14:0,63,2213	0/0:12,0:12:21.54:0,22,977	0/0:44,0:44:99:0,132,8195	0/0:20,0:20:60.19:0,60,3863	0/1:1,25:26:14.03:30,0,14	1/1:10,0:9:5.93:87,6,0	1/1:18,0:18:24.49:577,24,0	0/0:6,0:6:18.06:0,18,742	0/0:8,0:8:0.38:0,0,563	0/0:26,0:20:53.38:0,53,1701	0/0:15,0:15:39.03:0,39,2074	0/0:81,0:75:99:0,138,6118	0/0:14,0:12:33.58:0,34,2057	0/0:15,0:13:33.11:0,33,1823	0/0:29,0:29:87.21:0,87,4835	1/1:12,0:9:14.98:257,15,0	0/0:29,0:25:75.09:0,75,3467	0/0:22,0:22:63.68:0,64,3745	0/0:11,0:11:29.94:0,30,1076
chr10	52986177	.	ATCG	A	852.43	PASS	AB=1.000;AC=18;AF=0.333;AN=54;BaseQRankSum=8.162;DP=634;FS=12.933;HRun=0;HaplotypeScore=116.0642;InbreedingCoeff=0.5459;MQ=63.22;MQ0=21;MQRankSum=-6.723;QD=5.92;ReadPosRankSum=-2.333;VQSLOD=1.5259;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,3:13:14.43:112,14,0	1/1:2,1:3:3.01:35,3,0	0/0:42,0:21:55.98:0,56,957	0/0:54,0:31:59.96:0,60,1102	./.	0/1:14,0:14:31.16:31,0,51	0/1:16,0:16:15.87:16,0,100	0/1:10,0:9:23.25:95,0,23	0/0:26,0:26:2.94:0,3,18	0/0:26,0:24:66.14:0,66,1320	0/0:13,0:13:27.08:0,27,551	0/0:45,0:45:99:0,116,2514	0/0:20,0:20:56.82:0,57,1051	1/1:25,0:25:0.47:1,0,0	1/1:12,3:15:17.93:151,18,0	1/1:13,8:21:44.72:409,45,0	1/1:8,0:8:6.25:48,6,0	1/1:9,0:9:13.71:105,14,0	0/0:29,0:23:52.88:0,53,857	0/0:16,0:16:42.02:0,42,764	0/0:79,0:77:99:0,168,3381	0/0:18,0:17:47.98:0,48,777	0/0:19,0:19:56.99:0,57,970	0/0:26,0:26:78.15:0,78,1531	0/1:10,0:9:28.22:28,0,74	0/0:31,0:27:78.21:0,78,1620	0/0:25,0:25:72.08:0,72,1355	0/0:10,0:10:29.88:0,30,444
chr10	52987903	.	A	AG	550.34	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.642;DP=273;FS=1.058;HRun=3;HaplotypeScore=34.4316;InbreedingCoeff=0.8985;MQ=88.44;MQ0=0;MQRankSum=-3.411;QD=25.02;ReadPosRankSum=1.265;VQSLOD=2.6670;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:60.18:0,60,719	0/0:6,0:6:18.06:0,18,216	0/0:21,0:19:43.34:0,43,482	0/0:18,0:15:27.07:0,27,313	0/0:8,0:8:24.06:0,24,276	0/0:6,0:6:18.04:0,18,203	0/0:9,0:9:27.08:0,27,324	0/0:12,0:12:30.06:0,30,342	0/0:5,0:5:12.04:0,12,144	0/0:16,0:16:48.13:0,48,564	0/0:7,0:7:21.06:0,21,243	0/0:7,0:7:21.06:0,21,249	0/0:10,0:10:30.09:0,30,359	0/0:7,0:7:18.06:0,18,216	0/0:7,0:7:21.06:0,21,251	0/0:4,0:4:12.04:0,12,144	1/1:2,10:12:24.08:335,24,0	1/1:0,10:10:24.08:336,24,0	0/0:9,0:9:27.08:0,27,324	0/0:9,0:9:21.06:0,21,252	0/0:10,0:10:27.08:0,27,324	0/0:14,0:14:42.13:0,42,504	0/0:6,0:6:15.04:0,15,170	0/0:5,0:5:12.04:0,12,144	0/0:6,0:6:18.06:0,18,216	0/0:12,0:12:33.09:0,33,383	0/0:8,0:8:15.05:0,15,180	0/0:4,0:4:12.04:0,12,144
chr10	52988719	.	TC	T	1128.34	PASS	AB=0.833;AC=5;AF=0.089;AN=56;BaseQRankSum=10.490;DP=623;FS=0.000;HRun=6;HaplotypeScore=65.4377;InbreedingCoeff=0.7801;MQ=79.15;MQ0=0;MQRankSum=-1.443;QD=22.57;ReadPosRankSum=1.910;VQSLOD=3.0246;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:66.21:0,66,865	0/0:13,0:13:36.04:0,36,437	0/0:16,0:16:33.10:0,33,512	0/0:18,0:17:32.86:0,33,400	0/0:29,0:29:87.24:0,87,1121	0/0:28,0:28:81.25:0,81,1050	0/0:21,0:21:54.15:0,54,694	0/0:27,0:27:81.25:0,81,1051	0/0:23,0:23:63.19:0,63,812	0/0:31,0:31:87.28:0,87,1132	0/0:22,0:22:66.21:0,66,868	0/0:16,0:16:45.13:0,45,577	0/0:24,0:24:66.21:0,66,868	0/0:18,0:18:51.15:0,51,656	0/0:26,0:26:78.25:0,78,1026	0/0:26,0:26:75.22:0,75,959	1/1:1,20:21:57.14:613,57,0	1/1:1,18:19:57.14:611,57,0	0/0:18,0:18:48.15:0,48,618	0/0:34,0:34:90.28:0,90,1168	0/0:28,0:28:69.19:0,69,875	0/0:21,0:21:63.19:0,63,814	0/0:17,0:17:48.14:0,48,617	0/1:8,2:10:34.39:34,0,286	0/0:26,0:26:75.22:0,75,959	0/0:19,0:19:51.17:0,51,670	0/0:39,0:39:99:0,114,1498	0/0:11,0:11:33.11:0,33,434
chr10	52988953	.	T	TA	2429.27	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=4.697;DP=716;FS=1.923;HRun=9;HaplotypeScore=85.7987;InbreedingCoeff=0.9831;MQ=73.66;MQ0=0;MQRankSum=-8.666;QD=23.14;ReadPosRankSum=-1.081;VQSLOD=3.8762;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:12,24:36:45.58:676,46,0	1/1:2,9:11:26.94:268,27,0	0/0:22,0:23:46.85:0,47,375	0/0:11,0:11:9.57:0,10,119	0/0:27,0:27:74.86:0,75,640	0/0:21,0:21:41.94:0,42,358	0/0:23,0:23:59.93:0,60,511	0/0:35,0:36:91.97:0,92,784	0/0:27,0:27:62.95:0,63,547	0/0:36,0:36:89.96:0,90,781	0/0:25,0:25:65.97:0,66,569	0/0:35,0:35:99:0,102,880	0/0:33,0:33:92.92:0,93,796	0/0:25,0:25:62.95:0,63,540	1/1:5,17:22:54.07:574,54,0	1/1:4,31:36:99:1072,102,0	0/0:26,0:26:74.94:0,75,642	0/0:18,0:18:47.98:0,48,416	0/0:16,0:16:38.98:0,39,338	0/0:37,0:37:95.93:0,96,822	0/0:19,0:21:52.06:0,52,429	0/0:27,0:27:71.95:0,72,619	0/0:27,0:27:74.93:0,75,644	0/0:21,0:23:62.01:0,62,527	0/0:23,0:23:68.96:0,69,592	0/0:32,0:32:70.61:0,71,644	0/0:32,0:32:89.94:0,90,773	0/0:7,0:7:17.99:0,18,156
chr10	52988995	.	GTCTAGCT	G	6335.49	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=13.580;DP=738;FS=8.014;HRun=0;HaplotypeScore=178.0108;InbreedingCoeff=0.9713;MQ=82.22;MQ0=0;MQRankSum=-14.380;QD=62.73;ReadPosRankSum=1.445;VQSLOD=4.5570;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,31:33:69.15:1622,69,0	1/1:0,14:14:29.71:791,30,0	0/0:16,0:16:48.12:0,48,1722	0/0:27,0:27:78.27:0,78,3105	0/0:34,0:34:99:0,102,4195	0/0:21,0:21:63.22:0,63,2644	0/0:27,0:27:81.26:0,81,3078	0/0:41,0:41:99:0,123,4903	0/0:22,0:22:66.23:0,66,2681	0/0:35,0:35:99:0,105,4252	0/0:24,0:24:69.24:0,69,2860	0/0:32,0:32:96.33:0,96,3862	0/0:40,0:40:99:0,120,4849	0/0:30,0:30:90.31:0,90,3628	1/1:0,23:23:60.21:1676,60,0	1/1:1,30:31:84.29:2247,84,0	0/0:24,0:24:72.23:0,72,2631	0/0:15,0:15:45.15:0,45,1802	0/0:19,0:19:57.20:0,57,2320	0/0:35,0:35:99:0,102,4220	0/0:26,0:26:78.25:0,78,3032	0/0:32,0:32:96.33:0,96,3903	0/0:30,0:30:87.28:0,87,3352	0/0:27,0:27:81.28:0,81,3354	0/0:21,0:21:60.21:0,60,2473	0/0:26,0:26:78.27:0,78,3163	0/0:31,0:31:93.32:0,93,3819	0/0:2,0:2:6.02:0,6,252
chr10	52989290	.	C	CTA	2537.25	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-8.977;DP=817;FS=0.544;HRun=0;HaplotypeScore=96.0878;InbreedingCoeff=0.9891;MQ=80.27;MQ0=0;MQRankSum=-0.763;QD=49.75;ReadPosRankSum=2.136;VQSLOD=4.5305;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,126,1884	0/0:8,0:8:20.90:0,21,239	0/0:21,0:21:46.25:0,46,695	0/0:20,0:20:53.83:0,54,691	0/0:33,0:33:87.04:0,87,1251	0/0:25,0:25:75.21:0,75,1082	0/0:24,0:24:70.78:0,71,1038	0/0:39,0:38:99:0,108,1536	0/0:28,0:28:84.25:0,84,1227	0/0:40,0:40:99:0,114,1614	0/0:14,0:14:39.13:0,39,597	0/0:34,0:34:99:0,102,1539	0/0:46,0:46:99:0,135,1952	0/0:35,0:35:99:0,102,1429	0/0:39,0:39:99:0,114,1612	0/0:44,0:44:99:0,129,1951	1/1:2,38:40:99:2137,111,0	1/1:0,10:11:27.09:521,27,0	0/0:23,0:23:69.21:0,69,984	0/0:32,0:32:96.31:0,96,1444	0/0:31,0:31:90.25:0,90,1306	0/0:41,0:41:99:0,117,1723	0/0:29,0:29:84.25:0,84,1241	0/0:28,0:28:81.28:0,81,1239	0/0:27,0:27:81.26:0,81,1219	0/0:30,0:30:87.25:0,87,1287	0/0:28,0:28:84.29:0,84,1283	0/0:5,0:5:15.01:0,15,184
chr10	52989834	.	TTCACATCCTAGGCAAA	T	2641.90	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.456;DP=598;FS=0.000;HRun=0;HaplotypeScore=251.5393;InbreedingCoeff=0.9925;MQ=76.46;MQ0=0;MQRankSum=-7.571;QD=88.06;ReadPosRankSum=3.533;VQSLOD=3.0704;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:96.33:0,96,6527	0/0:6,0:6:18.06:0,18,1282	0/0:21,0:21:54.19:0,54,2770	0/0:19,0:19:54.16:0,54,3354	0/0:31,0:31:93.30:0,93,6818	0/0:22,0:22:60.21:0,60,4108	0/0:23,0:23:63.22:0,63,4314	0/0:25,0:25:69.24:0,69,5169	0/0:22,0:22:63.22:0,63,4628	0/0:26,0:26:78.27:0,78,5934	0/0:24,0:24:69.24:0,69,5111	0/0:19,0:19:57.18:0,57,4002	0/0:25,0:25:72.25:0,72,5472	0/0:14,0:14:42.14:0,42,3284	0/0:29,0:29:84.29:0,84,6223	0/0:29,0:29:78.27:0,78,6078	1/1:4,15:19:36.12:1644,36,0	1/1:1,10:11:24.08:1119,24,0	0/0:24,0:24:69.24:0,69,4520	0/0:31,0:31:90.31:0,90,6520	0/0:11,0:11:33.11:0,33,2572	0/0:22,0:22:63.22:0,63,4653	0/0:19,0:19:57.20:0,57,4331	0/0:20,0:20:60.21:0,60,4691	0/0:18,0:18:54.19:0,54,4072	0/0:21,0:21:57.20:0,57,4169	0/0:26,0:25:78.27:0,78,5921	0/0:7,0:7:21.07:0,21,1652
chr10	52991773	.	G	GGA	2149.58	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-1.025;DP=334;FS=0.000;HRun=0;HaplotypeScore=65.4862;InbreedingCoeff=0.9101;MQ=86.94;MQ0=2;MQRankSum=1.921;QD=10.75;ReadPosRankSum=0.121;VQSLOD=2.9352;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,8:15:21.07:353,21,0	1/1:0,2:3:6.02:101,6,0	0/0:26,0:18:23.16:0,23,257	0/0:24,0:20:17.77:0,18,156	1/1:19,1:20:37.51:220,38,0	1/1:7,0:7:11.50:62,12,0	1/1:11,0:11:25.75:136,26,0	1/1:6,0:6:11.63:73,12,0	1/1:13,0:13:19.93:102,20,0	1/1:14,0:14:29.02:176,29,0	1/1:10,0:10:17.25:92,17,0	0/0:10,0:10:12.02:0,12,130	0/0:13,0:13:29.96:0,30,328	1/1:10,0:10:14.37:77,14,0	1/1:2,6:8:6:101,6,0	1/1:4,4:8:6.02:101,6,0	0/0:15,0:15:42.08:0,42,482	0/0:13,0:13:29.97:0,30,289	1/1:4,0:4:11.47:59,11,0	1/1:17,0:17:26.11:147,26,0	1/1:8,0:8:8.63:46,9,0	0/0:13,0:13:30.04:0,30,312	0/0:13,0:13:30.04:0,30,322	0/0:7,0:7:21:0,21,227	1/1:15,0:15:20.15:108,20,0	1/1:8,0:8:20.22:123,20,0	1/1:15,0:15:37.06:192,37,0	1/1:8,0:8:17.28:92,17,0
chr10	52991780	.	G	GA	4750.13	PASS	AB=0.984;AC=34;AF=0.607;AN=56;BaseQRankSum=-8.571;DP=355;FS=11.183;HRun=1;HaplotypeScore=57.5161;InbreedingCoeff=0.6906;MQ=82.73;MQ0=3;MQRankSum=2.188;QD=21.79;ReadPosRankSum=4.429;VQSLOD=3.7215;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:14,1:15:79.81:80,0,137	0/1:6,0:6:17.29:17,0,59	0/0:26,0:18:25.08:0,25,340	0/0:22,0:17:28.93:0,29,261	1/1:2,17:19:45:564,45,0	1/1:0,6:5:12.04:171,12,0	1/1:0,11:11:27.09:383,27,0	1/1:0,11:11:30:308,30,0	1/1:1,13:15:21.06:294,21,0	1/1:0,11:11:30.08:392,30,0	1/1:1,10:11:18.05:256,18,0	0/0:6,0:6:15.02:0,15,160	0/0:16,0:16:44.81:0,45,506	1/1:2,10:12:15.04:214,15,0	0/1:12,0:12:11.61:12,0,102	0/1:8,0:8:14.15:14,0,107	0/0:16,0:16:42.03:0,42,402	0/0:12,0:12:29.81:0,30,244	1/1:0,5:5:14.86:164,15,0	1/1:1,16:17:29.89:339,30,0	1/1:0,7:7:12.03:156,12,0	0/0:14,0:14:36.02:0,36,366	0/0:13,0:13:35.79:0,36,380	0/0:12,0:12:25.52:0,26,345	1/1:2,13:15:21.06:300,21,0	1/1:0,9:9:26.71:280,27,0	1/1:0,19:19:39.13:548,39,0	1/1:2,6:8:18.05:257,18,0
chr10	52991786	.	GGGA	G	835.27	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=1.086;DP=382;FS=0.000;HRun=0;HaplotypeScore=77.0379;InbreedingCoeff=0.9636;MQ=81.69;MQ0=3;MQRankSum=-2.369;QD=33.41;ReadPosRankSum=3.328;VQSLOD=3.4788;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:51.13:0,51,878	0/0:7,0:7:18.05:0,18,322	0/0:27,0:19:34.30:0,34,478	0/0:21,0:19:20.50:0,20,306	0/0:25,0:25:63.46:0,63,758	0/0:6,0:5:15.04:0,15,231	0/0:17,0:17:45.09:0,45,662	0/0:17,0:16:50.93:0,51,496	0/0:15,0:15:30.08:0,30,460	0/0:11,0:11:32.45:0,32,446	0/0:15,0:15:30.19:0,30,358	0/0:7,0:7:20.99:0,21,283	0/0:15,0:15:42.01:0,42,862	0/0:15,0:15:27.05:0,27,382	0/0:11,0:11:24.08:0,24,471	0/0:10,0:10:24.05:0,24,427	1/1:0,16:16:39.13:622,39,0	1/1:0,9:9:21.07:334,21,0	0/0:9,0:9:26.96:0,27,275	0/0:19,0:19:38.97:0,39,506	0/0:9,0:9:21.03:0,21,279	0/0:9,0:9:21.07:0,21,409	0/0:10,0:10:30.06:0,30,521	0/0:11,0:11:33.11:0,33,634	0/0:13,0:13:24.08:0,24,409	0/0:10,0:10:15.01:0,15,231	0/0:19,0:19:42.11:0,42,708	0/0:10,0:10:27.06:0,27,382
chr10	52992407	.	T	TG	966.67	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-0.626;DP=743;FS=6.546;HRun=3;HaplotypeScore=69.3619;InbreedingCoeff=0.9936;MQ=89.77;MQ0=0;MQRankSum=-1.406;QD=33.33;ReadPosRankSum=1.080;VQSLOD=4.1850;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,117,1391	0/0:7,0:7:21.05:0,21,241	0/0:33,0:33:93.28:0,93,1104	0/0:22,0:22:57.16:0,57,672	0/0:20,0:20:57.17:0,57,683	0/0:34,0:34:99:0,99,1163	0/0:25,0:25:75.23:0,75,899	0/0:33,0:33:87.24:0,87,1016	0/0:27,0:27:81.25:0,81,972	0/0:29,0:29:83.84:0,84,971	0/0:25,0:25:75.20:0,75,875	0/0:31,0:31:93.29:0,93,1116	0/0:45,0:45:99:0,129,1547	0/0:24,0:24:72.20:0,72,851	0/0:37,0:37:99:0,108,1281	0/0:40,0:40:99:0,117,1380	1/1:1,17:18:45.15:630,45,0	1/1:0,11:11:33.11:458,33,0	0/0:22,0:22:63.18:0,63,743	0/0:29,0:29:84.26:0,84,1007	0/0:26,0:26:78.24:0,78,935	0/0:25,0:25:75.21:0,75,879	0/0:20,0:20:60.15:0,60,694	0/0:29,0:29:87.27:0,87,1043	0/0:31,0:31:90.26:0,90,1068	0/0:19,0:19:57.17:0,57,675	0/0:32,0:32:93.28:0,93,1116	0/0:7,0:7:18.05:0,18,215
chr10	52995772	.	AGT	A	207.10	PASS	AB=0.939;AC=8;AF=0.160;AN=50;BaseQRankSum=-0.555;DP=579;FS=0.000;HRun=0;HaplotypeScore=106.0715;InbreedingCoeff=0.0603;MQ=60.97;MQ0=3;MQRankSum=0.773;QD=1.57;ReadPosRankSum=1.432;VQSLOD=1.8812;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:17.07:0,17,182	0/0:11,0:11:7.45:0,7,56	0/0:21,0:15:0:0,0,0	./.	0/0:22,0:22:2.89:0,3,24	0/0:29,0:29:3.75:0,4,28	0/0:19,0:19:2.35:0,2,24	./.	0/0:13,0:13:2.02:0,2,6	0/0:18,0:18:17.59:0,18,172	0/0:7,0:12:0.42:0,0,22	0/1:10,6:17:23.99:124,0,24	1/1:11,4:15:12.03:128,12,0	0/0:27,0:26:5.99:0,6,49	0/1:25,1:26:8.03:8,0,219	0/1:18,0:18:23.12:23,0,78	0/0:21,0:21:20.42:0,20,206	./.	0/0:28,0:28:29.41:0,29,295	0/0:13,0:20:11.22:0,11,61	0/0:53,0:53:21.07:0,21,237	0/1:15,0:14:23.02:23,0,60	0/1:25,0:26:19.60:20,0,61	0/0:21,0:21:2.71:0,3,278	0/1:15,0:15:0:0,0,1	0/0:22,0:22:23.61:0,24,206	0/0:18,0:18:17.68:0,18,154	0/0:2,0:2:3.01:0,3,41
chr10	52996592	.	AG	A	1053.25	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.248;DP=767;FS=0.720;HRun=1;HaplotypeScore=99.1914;InbreedingCoeff=0.9991;MQ=77.91;MQ0=0;MQRankSum=-1.276;QD=33.98;ReadPosRankSum=1.774;VQSLOD=3.5359;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:61,0:61:99:0,184,2834	0/0:13,0:13:39.13:0,39,618	0/0:12,0:12:30.08:0,30,429	0/0:20,0:20:42.14:0,42,651	0/0:35,0:35:99:0,105,1675	0/0:21,0:21:63.21:0,63,1007	0/0:26,0:26:78.27:0,78,1245	0/0:26,0:26:78.26:0,78,1224	0/0:29,0:29:87.28:0,87,1368	0/0:29,0:29:87.30:0,87,1388	0/0:27,0:27:81.26:0,81,1270	0/0:27,0:27:81.28:0,81,1295	0/0:38,0:38:99:0,114,1818	0/0:34,0:34:99:0,102,1596	0/0:25,0:25:75.26:0,75,1199	0/0:45,0:45:99:0,135,2156	1/1:0,16:16:45.15:629,45,0	1/1:0,15:15:39.13:545,39,0	0/0:17,0:17:51.17:0,51,814	0/0:35,0:35:99:0,102,1606	0/0:34,0:34:99:0,99,1537	0/0:27,0:27:81.25:0,81,1253	0/0:26,0:26:78.25:0,78,1223	0/0:34,0:34:99:0,102,1607	0/0:21,0:21:63.19:0,63,982	0/0:28,0:28:84.29:0,84,1343	0/0:37,0:37:99:0,111,1771	0/0:9,0:9:27.09:0,27,432
chr10	52997497	.	CA	C	5319.11	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=15.249;DP=800;FS=2.233;HRun=6;HaplotypeScore=72.4880;InbreedingCoeff=0.9997;MQ=71.38;MQ0=0;MQRankSum=-5.322;QD=28.29;ReadPosRankSum=2.203;VQSLOD=5.6268;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:84.26:0,84,1091	0/0:10,0:10:30.10:0,30,394	0/0:19,0:19:35.09:0,35,591	0/0:16,0:15:30.02:0,30,353	1/1:3,41:44:99:1224,114,0	1/1:1,32:33:96.24:1032,96,0	1/1:0,28:28:72.18:774,72,0	0/0:35,0:35:93.28:0,93,1189	1/1:2,24:26:69.17:741,69,0	0/0:41,0:41:99:0,111,1445	0/0:24,0:24:63.20:0,63,825	0/0:32,0:32:96.31:0,96,1263	0/0:41,0:41:99:0,111,1443	1/1:1,31:32:90.23:967,90,0	0/0:43,0:43:99:0,117,1488	0/0:23,1:24:33.96:0,34,796	0/0:25,0:25:72.22:0,72,933	0/0:15,0:15:39.12:0,39,513	0/0:32,0:32:87.26:0,87,1116	0/0:26,0:26:78.24:0,78,1000	0/0:36,0:36:99:0,99,1302	0/0:28,0:28:81.25:0,81,1052	0/0:27,0:27:78.24:0,78,1012	0/0:25,0:25:69.21:0,69,892	1/1:3,22:25:54.13:580,54,0	0/0:27,0:27:72.22:0,72,932	0/0:32,0:32:93.30:0,93,1224	0/0:25,0:25:69.19:0,69,874
chr10	52998747	.	CAATGGCA	C	1464.41	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.672;DP=786;FS=0.833;HRun=0;HaplotypeScore=200.5160;InbreedingCoeff=0.9988;MQ=88.79;MQ0=0;MQRankSum=-7.052;QD=43.07;ReadPosRankSum=0.538;VQSLOD=3.0017;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,132,5114	0/0:14,0:14:39.13:0,39,1479	0/0:26,0:26:50.06:0,50,2376	0/0:33,0:33:92.87:0,93,2723	0/0:27,0:27:78.27:0,78,3139	0/0:23,0:23:69.24:0,69,2739	0/0:16,0:16:48.16:0,48,1951	0/0:39,0:39:99:0,117,4610	0/0:34,0:34:99:0,99,3907	0/0:47,0:47:99:0,141,5594	0/0:22,0:22:66.23:0,66,2572	0/0:37,0:37:99:0,111,4457	0/0:36,0:36:99:0,108,4348	0/0:30,0:30:90.31:0,90,3406	0/0:38,0:38:99:0,114,4535	0/0:27,0:27:78.27:0,78,3097	1/1:3,17:20:24.08:616,24,0	1/1:1,13:14:36.12:969,36,0	0/0:28,0:28:81.27:0,81,3006	0/0:28,0:28:81.28:0,81,3057	0/0:23,0:23:69.24:0,69,2693	0/0:20,0:20:60.21:0,60,2451	0/0:22,0:22:66.23:0,66,2545	0/0:33,0:33:96.33:0,96,3711	0/0:29,0:29:87.30:0,87,3467	0/0:32,0:32:93.32:0,93,3691	0/0:29,0:29:87.30:0,87,3421	0/0:15,0:15:39.13:0,39,1528
chr10	52998956	.	G	GA	1649.50	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-6.649;DP=775;FS=2.026;HRun=1;HaplotypeScore=128.2234;InbreedingCoeff=0.9978;MQ=84.47;MQ0=0;MQRankSum=-2.454;QD=38.36;ReadPosRankSum=0.897;VQSLOD=3.3299;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,117,1503	0/0:11,0:11:33.11:0,33,429	0/0:22,0:22:57.18:0,57,738	0/0:26,0:26:66.17:0,66,833	0/0:26,0:26:72.22:0,72,921	0/0:19,0:19:54.18:0,54,701	0/0:30,0:30:81.26:0,81,1052	0/0:24,0:24:72.23:0,72,923	0/0:29,0:29:81.26:0,81,1052	0/0:38,0:38:99:0,111,1431	0/0:24,0:24:66.21:0,66,856	0/0:29,0:29:87.28:0,87,1127	0/0:39,0:39:99:0,114,1474	0/0:31,0:31:90.28:0,90,1153	0/0:37,0:37:96.28:0,96,1222	0/0:40,0:40:99:0,120,1557	1/1:3,20:23:66.19:962,66,0	1/1:1,19:20:54.18:809,54,0	0/0:14,0:14:42.12:0,42,529	0/0:25,0:25:69.22:0,69,896	0/0:29,0:29:84.27:0,84,1091	0/0:28,0:28:84.26:0,84,1075	0/0:31,0:31:93.30:0,93,1208	0/0:31,0:31:90.28:0,90,1154	0/0:39,0:39:99:0,108,1402	0/0:27,0:27:78.25:0,78,1013	0/0:33,0:33:93.26:0,93,1174	0/0:7,0:7:21.07:0,21,272
chr10	52999021	.	G	GA	5235.58	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-10.119;DP=667;FS=0.000;HRun=8;HaplotypeScore=105.7783;InbreedingCoeff=0.9984;MQ=83.42;MQ0=0;MQRankSum=-1.150;QD=25.79;ReadPosRankSum=0.026;VQSLOD=4.3809;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:39:0,39,351	0/0:16,0:16:45.02:0,45,411	0/0:22,0:22:44.66:0,45,406	0/0:22,0:21:42:0,42,377	1/1:4,20:24:59.94:604,60,0	1/1:1,26:27:66.20:761,66,0	1/1:4,23:27:35.72:665,36,0	0/0:39,0:38:99:0,99,896	1/1:3,14:17:39.12:450,39,0	0/0:2,0:24:46.06:0,46,134	0/0:0,0:12:22.41:0,22,66	0/0:31,0:32:86.07:0,86,775	0/0:36,0:36:70.66:0,71,820	1/1:7,21:29:69.03:768,69,0	0/0:22,0:22:63.02:0,63,571	0/0:31,0:31:69.02:0,69,632	1/1:6,22:28:69.18:776,69,0	1/1:5,17:22:51.62:587,52,0	0/0:2,0:15:21.31:0,21,61	0/0:1,0:22:38.70:0,39,114	0/0:2,0:28:46.85:0,47,138	0/0:19,0:19:42.01:0,42,384	0/0:15,0:15:32.96:0,33,294	0/0:24,0:24:66.03:0,66,604	1/1:4,25:29:54.16:623,54,0	0/0:4,0:26:42.36:0,42,124	0/0:3,0:33:43.16:0,43,131	0/0:0,0:12:24.44:0,24,72
chr10	52999765	.	G	GT	1280.81	PASS	AB=0.866;AC=11;AF=0.196;AN=56;BaseQRankSum=-8.285;DP=590;FS=4.538;HRun=11;HaplotypeScore=85.0210;InbreedingCoeff=0.3559;MQ=72.36;MQ0=0;MQRankSum=-0.933;QD=7.67;ReadPosRankSum=0.314;VQSLOD=2.5348;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,20:26:33.07:335,33,0	1/1:3,8:11:6.66:235,7,0	0/1:12,0:12:7.10:7,0,133	0/0:9,0:9:0.25:0,0,28	0/0:28,0:28:62.71:0,63,488	0/0:24,0:24:56.76:0,57,440	0/0:15,1:16:8.40:0,8,248	0/0:16,0:16:26.81:0,27,205	0/0:18,0:19:46.84:0,47,354	0/0:27,2:32:24.35:0,24,353	0/0:21,0:24:46.84:0,47,354	0/0:14,1:16:1.46:0,1,184	0/0:29,0:29:77.67:0,78,603	0/0:23,0:23:56.77:0,57,441	0/1:6,11:17:13.41:241,0,13	1/1:3,20:23:39.89:586,40,0	0/0:3,0:22:30.33:0,30,88	0/0:4,0:14:22.18:0,22,64	0/0:26,0:27:58.78:0,59,447	0/0:34,0:37:92.70:0,93,682	0/0:14,1:15:11.44:0,11,271	0/1:18,2:21:20.04:20,0,220	0/0:21,2:23:20.32:0,20,341	0/0:9,0:9:20.91:0,21,163	0/1:24,3:27:4.21:4,0,336	0/1:27,3:30:1.02:1,0,357	0/0:30,2:34:2.01:0,2,486	0/0:6,0:6:5.96:0,6,46
chr10	53001923	.	AT	A	3007.34	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=7.394;DP=722;FS=1.902;HRun=4;HaplotypeScore=74.7347;InbreedingCoeff=0.9999;MQ=78.60;MQ0=0;MQRankSum=-5.204;QD=31.33;ReadPosRankSum=3.543;VQSLOD=4.2810;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,18:18:54.17:648,54,0	1/1:0,13:13:36.02:432,36,0	0/0:18,0:18:50.90:0,51,654	0/0:15,0:15:33.05:0,33,415	0/0:45,0:45:99:0,135,1873	0/0:20,0:20:51.17:0,51,706	0/0:20,0:20:60.17:0,60,791	0/0:35,0:35:93.30:0,93,1287	0/0:23,0:23:66.22:0,66,923	0/0:39,0:39:99:0,111,1554	0/0:30,0:30:87.29:0,87,1218	0/0:29,0:29:87.28:0,87,1201	0/0:33,0:33:96.30:0,96,1316	0/0:17,0:17:51.16:0,51,698	1/1:1,34:35:87.27:1044,87,0	1/1:1,29:30:87.27:1044,87,0	0/0:22,0:22:60.20:0,60,834	0/0:19,0:19:45.15:0,45,629	0/0:27,0:27:75.22:0,75,1012	0/0:31,0:31:90.30:0,90,1260	0/0:17,0:17:48.16:0,48,672	0/0:19,0:19:54.17:0,54,739	0/0:35,0:35:99:0,102,1428	0/0:33,0:33:99:0,99,1386	0/0:17,0:17:48.12:0,48,623	0/0:30,0:30:90.29:0,90,1246	0/0:36,0:36:99:0,102,1428	0/0:16,0:16:48.16:0,48,672
chr10	53002041	.	AG	A	3419.10	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=1.504;DP=805;FS=2.908;HRun=3;HaplotypeScore=109.7706;InbreedingCoeff=0.9913;MQ=72.95;MQ0=0;MQRankSum=-1.202;QD=33.52;ReadPosRankSum=2.366;VQSLOD=3.5320;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,32:32:84.26:1040,84,0	1/1:0,4:4:12.04:149,12,0	0/0:39,1:37:54.94:0,55,1185	0/0:32,0:28:63.53:0,64,882	0/0:28,0:28:84.23:0,84,1167	0/0:27,0:27:81.25:0,81,1129	0/0:23,0:23:69.22:0,69,974	0/0:38,0:38:99:0,105,1407	0/0:25,0:25:72.24:0,72,1035	0/0:28,0:28:84.28:0,84,1186	0/0:22,0:22:66.22:0,66,950	0/0:39,0:39:99:0,114,1638	0/0:30,0:30:90.29:0,90,1277	0/0:31,0:31:90.29:0,90,1274	1/1:0,32:32:90.28:1115,90,0	1/1:1,33:34:90.28:1115,90,0	0/0:20,0:20:60.18:0,60,819	0/0:13,0:13:39.06:0,39,516	0/0:20,0:19:60.20:0,60,863	0/0:43,0:43:99:0,126,1774	0/0:34,0:34:99:0,102,1461	0/0:26,0:26:75.18:0,75,987	0/0:26,0:26:78.24:0,78,1087	0/0:37,0:37:99:0,102,1421	0/0:40,0:40:99:0,117,1684	0/0:28,0:28:84.28:0,84,1192	0/0:34,0:34:99:0,102,1463	0/0:19,0:19:57.19:0,57,820
chr10	53002720	.	T	TCCCC	4840.53	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=5.247;DP=649;FS=0.000;HRun=7;HaplotypeScore=142.8573;InbreedingCoeff=0.9628;MQ=80.60;MQ0=0;MQRankSum=-10.761;QD=40.68;ReadPosRankSum=-1.699;VQSLOD=2.1005;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,117,1828	0/0:12,0:12:30.09:0,30,467	0/0:14,0:14:39.11:0,39,582	0/0:24,0:24:49.39:0,49,737	1/1:7,8:17:24.05:556,24,0	1/1:12,6:18:21.07:523,21,0	1/1:7,13:23:57.19:1335,57,0	0/0:30,0:30:69.17:0,69,1079	1/1:7,13:22:42.14:1015,42,0	0/0:27,0:27:63.16:0,63,978	0/0:19,0:19:48.13:0,48,740	0/0:32,0:32:78.22:0,78,1219	0/0:19,0:19:51.16:0,51,794	1/1:12,14:28:45.15:1043,45,0	0/0:28,0:28:78.24:0,78,1197	0/0:28,1:29:3.14:0,3,1098	0/0:43,0:43:99:0,114,1759	0/0:14,0:14:39.10:0,39,577	0/0:18,0:18:33.07:0,33,516	0/0:29,0:29:84.26:0,84,1268	0/0:21,0:21:57.17:0,57,875	0/0:16,0:16:39.11:0,39,610	0/0:26,0:26:69.19:0,69,1026	0/0:20,0:20:57.19:0,57,892	1/1:7,4:11:17.80:369,18,0	0/0:28,0:28:78.23:0,78,1195	0/0:26,0:26:72.22:0,72,1102	0/0:12,0:12:33.10:0,33,508
chr10	53002990	.	T	TGAGAA	16039.04	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-12.101;DP=674;FS=13.059;HRun=0;HaplotypeScore=115.5259;InbreedingCoeff=1.0000;MQ=90.21;MQ0=0;MQRankSum=-8.492;QD=86.23;ReadPosRankSum=2.727;VQSLOD=6.6468;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,132,2941	0/0:14,0:14:42.14:0,42,937	0/0:35,0:35:99:0,99,2136	0/0:24,0:24:63.18:0,63,1257	0/0:21,0:21:63.22:0,63,1395	0/0:18,0:18:54.14:0,54,1157	0/0:18,0:18:54.19:0,54,1181	0/0:23,0:23:66.20:0,66,1388	0/0:28,0:28:84.25:0,84,1826	1/1:4,26:31:90.31:2837,90,0	1/1:3,13:17:45.15:1380,45,0	0/0:34,0:34:96.31:0,96,2031	0/0:35,0:35:99:0,102,2232	0/0:21,0:21:60.21:0,60,1338	0/0:22,0:22:66.23:0,66,1471	0/0:24,0:24:72.18:0,72,1475	0/0:24,0:24:69.24:0,69,1504	0/0:15,0:15:42.09:0,42,841	1/1:8,8:17:45.14:1308,45,0	1/1:5,23:28:81.23:2374,81,0	1/1:4,17:23:54.19:1740,54,0	0/0:14,0:14:42.14:0,42,937	0/0:22,0:22:66.21:0,66,1419	0/0:26,0:26:78.25:0,78,1698	0/0:23,0:23:69.22:0,69,1480	1/1:2,24:28:84.29:2604,84,0	1/1:0,23:24:69.24:2169,69,0	1/1:1,17:18:51.18:1627,51,0
chr10	53003070	.	A	AGT	4668.74	PASS	AB=0.803;AC=37;AF=0.740;AN=50;BaseQRankSum=-0.977;DP=693;FS=3.972;HRun=0;HaplotypeScore=158.9251;InbreedingCoeff=-0.3117;MQ=62.23;MQ0=11;MQRankSum=0.494;QD=7.57;ReadPosRankSum=1.778;VQSLOD=4.5856;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:28:5.27:24,5,0	1/1:11,0:10:3:26,3,0	./.	./.	0/1:22,0:25:0:0,0,0	1/1:21,2:33:17.95:167,18,0	1/1:24,0:28:3.88:29,4,0	1/1:30,0:29:11.99:128,12,0	1/1:14,0:20:9:78,9,0	0/1:21,1:21:51.51:121,0,52	0/1:12,3:16:6.21:291,0,6	0/1:13,13:27:33.43:373,0,33	0/1:14,15:31:26.51:324,0,27	1/1:20,2:25:9:77,9,0	1/1:23,0:24:5.98:47,6,0	1/1:20,0:27:15.47:132,15,0	1/1:22,1:31:18.01:176,18,0	1/1:17,0:22:12.91:121,13,0	./.	0/1:26,6:32:42.22:367,0,42	0/1:25,5:30:80.76:245,0,81	0/1:10,9:21:0.28:293,0,0	0/1:18,7:30:52.68:286,0,53	1/1:14,13:30:3.11:456,3,0	0/1:16,0:20:3.43:21,0,3	0/1:16,3:19:34.33:217,0,34	0/1:14,8:20:21.40:522,0,21	0/1:8,0:8:18.22:147,0,18
chr10	53003557	.	AG	A	11093.94	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=3.271;DP=764;FS=0.271;HRun=2;HaplotypeScore=87.0340;InbreedingCoeff=0.9974;MQ=87.73;MQ0=0;MQRankSum=-3.505;QD=36.25;ReadPosRankSum=4.485;VQSLOD=5.1973;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,24:24:60.20:779,60,0	1/1:0,9:9:24.08:312,24,0	0/0:32,0:32:87.27:0,87,1246	0/0:21,0:21:39.83:0,40,764	1/1:0,42:42:99:1597,123,0	1/1:0,38:38:99:1364,105,0	1/1:0,21:21:63.20:818,63,0	0/0:42,0:41:99:0,117,1729	1/1:0,26:26:78.25:1013,78,0	0/0:39,0:39:99:0,114,1709	0/0:31,0:31:90.28:0,90,1323	0/0:18,0:18:54.17:0,54,789	0/0:34,0:34:96.29:0,96,1393	1/1:0,29:29:81.26:1045,81,0	1/1:0,38:38:99:1324,102,0	1/1:0,15:15:42.14:545,42,0	1/1:0,15:15:39.13:506,39,0	1/1:0,14:14:33.11:428,33,0	0/0:22,0:22:63.19:0,63,905	0/0:35,0:35:99:0,102,1504	0/0:22,0:22:66.21:0,66,969	0/0:28,0:28:81.26:0,81,1190	0/0:31,0:31:90.29:0,90,1329	0/0:27,0:27:81.27:0,81,1214	1/1:0,35:35:99:1363,105,0	0/0:31,0:31:90.30:0,90,1344	0/0:40,0:40:99:0,120,1797	0/0:5,0:5:15.05:0,15,225
chr10	53004429	.	T	TTAAA	29834.71	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-14.643;DP=666;FS=0.000;HRun=0;HaplotypeScore=86.2075;InbreedingCoeff=0.9997;MQ=79.87;MQ0=0;MQRankSum=-8.692;QD=62.03;ReadPosRankSum=2.437;VQSLOD=6.5536;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,14:18:42.14:1100,42,0	1/1:1,11:12:33.11:851,33,0	0/0:16,0:16:48.12:0,48,794	0/0:20,0:20:57.19:0,57,1014	1/1:3,29:33:87.30:2195,87,0	1/1:6,23:29:69.24:1802,69,0	1/1:3,18:21:54.19:1426,54,0	0/0:24,0:24:48.15:0,48,822	1/1:6,19:25:54.19:1411,54,0	1/1:5,28:33:87.30:2246,87,0	1/1:4,18:22:42.14:981,42,0	0/0:26,0:26:75.26:0,75,1374	0/0:23,0:23:66.22:0,66,1185	1/1:4,18:22:57.20:1466,57,0	1/1:7,24:31:81.28:2019,81,0	1/1:4,24:28:48.16:1236,48,0	1/1:2,14:16:39.13:1029,39,0	1/1:2,13:15:39.13:1009,39,0	1/1:3,20:24:63.20:1557,63,0	1/1:2,23:26:66.23:1585,66,0	1/1:3,16:20:36.12:935,36,0	0/0:28,0:28:78.26:0,78,1397	0/0:26,0:26:60.21:0,60,1099	0/0:22,0:22:63.22:0,63,1147	1/1:3,32:35:96.33:2499,96,0	1/1:2,15:17:48.16:1253,48,0	1/1:8,33:41:96.33:2523,96,0	1/1:0,13:13:27.09:712,27,0
chr10	53006563	.	T	TA	7025.72	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=13.370;DP=647;FS=3.893;HRun=5;HaplotypeScore=91.7963;InbreedingCoeff=0.9998;MQ=65.16;MQ0=2;MQRankSum=0.433;QD=39.03;ReadPosRankSum=-0.770;VQSLOD=2.5839;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:84.16:0,84,1064	0/0:10,0:10:30.10:0,30,389	0/0:15,0:13:36.10:0,36,445	0/0:13,0:11:29.96:0,30,357	0/0:23,0:23:69.19:0,69,859	0/0:32,0:32:90.29:0,90,1168	0/0:23,0:23:63.20:0,63,817	0/0:22,0:22:63.20:0,63,817	0/0:22,0:22:63.20:0,63,816	1/1:2,29:31:90.24:1251,90,0	1/1:0,21:21:63.21:909,63,0	0/0:40,0:40:99:0,120,1543	0/0:30,0:30:84.20:0,84,1069	0/0:37,0:37:99:0,105,1344	0/0:27,0:26:78.24:0,78,998	0/0:20,0:20:60.18:0,60,764	0/0:32,0:32:96.26:0,96,1212	0/0:14,0:14:35.79:0,36,440	1/1:2,15:16:42.12:587,42,0	1/1:1,25:26:72.18:1000,72,0	1/1:1,23:24:66.22:960,66,0	0/0:17,0:17:48.15:0,48,613	0/0:18,0:18:48.16:0,48,622	0/0:21,0:21:63.17:0,63,787	0/0:19,0:19:57.19:0,57,740	1/1:2,25:26:72.20:994,72,0	1/1:0,19:19:54.11:758,54,0	1/1:0,14:14:39.13:566,39,0
chr10	53010459	.	CT	C	2141.06	PASS	AB=0.667;AC=29;AF=0.518;AN=56;BaseQRankSum=5.622;DP=446;FS=8.952;HRun=13;HaplotypeScore=76.4685;InbreedingCoeff=0.7840;MQ=62.13;MQ0=21;MQRankSum=-0.851;QD=8.20;ReadPosRankSum=-0.266;VQSLOD=2.1096;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:14:23.90:0,24,201	0/0:8,0:8:11.99:0,12,109	0/0:7,0:7:0:0,0,0	0/0:7,0:4:6:0,6,53	1/1:8,16:23:35.72:262,36,0	1/1:3,12:13:35.79:263,36,0	1/1:8,13:21:21.40:264,21,0	1/1:10,19:28:56.52:413,57,0	1/1:4,7:10:17.86:131,18,0	1/1:9,0:25:32.22:93,32,0	1/1:1,0:9:16.29:47,16,0	0/0:17,0:16:24.01:0,24,231	0/0:25,0:24:53.65:0,54,481	1/1:1,16:17:38.56:272,39,0	0/0:12,1:13:1.96:0,2,166	0/0:18,1:19:17.14:0,17,321	0/0:21,1:21:26.06:0,26,387	0/0:8,0:9:20.87:0,21,189	0/1:5,0:10:16.16:16,0,16	1/1:4,0:18:28.25:81,28,0	1/1:5,0:11:15.99:46,16,0	0/0:9,1:11:1.98:0,2,168	0/0:11,1:13:4.81:0,5,182	0/0:11,0:9:15.02:0,15,146	1/1:3,11:14:35.76:261,36,0	1/1:3,0:18:30.23:87,30,0	1/1:8,0:24:34.45:100,34,0	1/1:8,0:9:3.99:12,4,0
chr10	53010544	.	TC	T	900.36	PASS	AC=14;AF=0.318;AN=44;BaseQRankSum=4.488;DP=175;FS=0.000;HRun=6;HaplotypeScore=27.8216;InbreedingCoeff=0.6810;MQ=24.66;MQ0=53;MQRankSum=-0.788;QD=16.08;ReadPosRankSum=0.119;VQSLOD=1.9296;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	0/0:3,0:2:6.02:0,6,79	0/0:10,0:7:12.04:0,12,158	0/0:16,0:11:30.10:0,30,387	0/0:14,0:10:27.05:0,27,335	0/0:5,0:3:6.02:0,6,79	1/1:5,2:3:6.02:64,6,0	1/1:2,7:7:18.05:193,18,0	0/0:5,0:5:12.04:0,12,158	0/0:8,0:5:15.05:0,15,197	0/0:3,0:2:6.02:0,6,79	0/0:7,0:5:12.01:0,12,111	0/0:4,0:4:2.92:0,3,17	0/0:5,0:3:3.01:0,3,39	0/0:3,0:1:3.01:0,3,39	1/1:5,3:5:9.02:96,9,0	1/1:1,5:6:15.04:159,15,0	./.	./.	0/0:7,0:6:12.04:0,12,157	0/0:7,0:2:3.01:0,3,39	0/0:4,0:4:3.01:0,3,39	1/1:5,9:12:27.07:289,27,0	1/1:1,8:9:21.05:224,21,0	1/1:2,1:2:3.01:32,3,0
chr10	53012679	.	A	AG	1644.78	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-7.498;DP=711;FS=1.965;HRun=1;HaplotypeScore=64.0012;InbreedingCoeff=0.9991;MQ=85.04;MQ0=0;MQRankSum=-1.628;QD=34.27;ReadPosRankSum=1.241;VQSLOD=3.4778;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:84.17:0,84,1050	0/0:10,0:10:30.08:0,30,374	0/0:22,0:22:56.27:0,56,683	0/0:22,0:23:57.75:0,58,680	0/0:27,0:27:81.20:0,81,1016	0/0:30,0:30:90.24:0,90,1103	0/0:26,0:26:72.21:0,72,908	0/0:33,0:33:99:0,99,1236	0/0:24,0:24:72.17:0,72,887	0/0:43,0:43:99:0,129,1632	0/0:30,0:30:87.25:0,87,1087	0/0:21,0:21:63.20:0,63,817	0/0:26,0:26:78.24:0,78,997	0/0:30,0:30:90.25:0,90,1125	0/0:31,0:31:93.27:0,93,1165	0/0:31,0:31:93.30:0,93,1195	1/1:1,29:30:78.18:1140,78,0	1/1:0,18:18:42.14:627,42,0	0/0:19,0:19:57.15:0,57,691	0/0:31,0:31:90.25:0,90,1126	0/0:23,0:23:63.17:0,63,787	0/0:23,0:23:69.21:0,69,880	0/0:21,0:21:63.18:0,63,791	0/0:27,0:27:81.23:0,81,1011	0/0:13,0:13:36.12:0,36,467	0/0:32,0:32:93.29:0,93,1193	0/0:30,0:30:84.22:0,84,1069	0/0:9,0:9:27.09:0,27,350
chr10	53015999	.	CT	C	1726.64	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.105;DP=776;FS=12.646;HRun=2;HaplotypeScore=73.3835;InbreedingCoeff=0.9484;MQ=84.12;MQ0=0;MQRankSum=-2.215;QD=30.29;ReadPosRankSum=2.407;VQSLOD=2.1606;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:56:99:0,169,2433	0/0:12,0:12:33.11:0,33,494	0/0:24,0:24:68.76:0,69,936	0/0:22,0:22:58.07:0,58,838	0/0:26,0:26:78.18:0,78,1118	0/0:18,0:18:48.16:0,48,719	0/0:25,1:26:39.32:0,39,1046	0/0:25,0:25:75.23:0,75,1071	0/0:27,0:27:81.24:0,81,1153	0/0:30,0:30:84.27:0,84,1212	0/0:18,0:18:54.17:0,54,786	0/0:27,0:27:81.27:0,81,1214	0/0:34,0:34:99:0,102,1504	0/0:38,0:38:99:0,114,1683	0/0:40,0:40:99:0,117,1679	0/0:33,0:33:99:0,99,1464	1/1:0,38:38:96.26:1226,96,0	1/1:1,18:19:48.16:622,48,0	0/0:26,0:26:78.22:0,78,1111	0/0:19,0:19:57.19:0,57,853	0/0:38,0:38:99:0,108,1617	0/0:30,0:30:84.28:0,84,1253	0/0:23,0:23:63.21:0,63,942	0/0:44,0:44:99:0,129,1912	0/0:23,0:23:69.22:0,69,1011	0/0:22,0:22:66.21:0,66,947	0/0:36,0:36:99:0,105,1488	0/0:2,0:2:6.02:0,6,90
chr10	53016367	.	CTTATAT	C	6374.37	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=6.086;DP=774;FS=0.848;HRun=0;HaplotypeScore=177.2005;InbreedingCoeff=0.9862;MQ=83.93;MQ0=0;MQRankSum=-14.474;QD=44.27;ReadPosRankSum=2.731;VQSLOD=4.7715;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,40:43:69.24:1563,69,0	1/1:1,7:8:11.95:283,12,0	0/0:31,0:31:75.14:0,75,2051	0/0:22,0:22:54.15:0,54,1616	0/0:32,0:32:81.26:0,81,2670	0/0:43,0:43:99:0,123,4092	0/0:21,0:21:54.19:0,54,1864	0/0:32,0:32:87.30:0,87,2949	0/0:26,0:26:78.27:0,78,2711	0/0:38,0:38:99:0,111,3700	0/0:22,0:22:60.19:0,60,1876	0/0:34,0:34:99:0,102,3435	0/0:37,0:37:99:0,111,3922	0/0:31,0:31:90.31:0,90,3106	1/1:1,48:49:99:2655,114,0	1/1:4,40:44:81.28:1873,81,0	0/0:29,0:29:81.28:0,81,2776	0/0:9,0:9:24.08:0,24,849	0/0:19,0:19:54.19:0,54,1846	0/0:27,0:27:81.26:0,81,2631	0/0:19,0:19:54.19:0,54,1917	0/0:26,0:26:69.22:0,69,2113	0/0:22,0:22:60.68:0,61,1986	0/0:11,0:11:33.10:0,33,1070	0/0:32,0:32:90.31:0,90,2909	0/0:27,0:27:78.26:0,78,2698	0/0:35,0:35:99:0,99,3501	0/0:5,0:5:15.05:0,15,488
chr10	53016687	.	G	GAATA	1777	PASS	AC=8;AF=0.148;AN=54;BaseQRankSum=-2.622;DP=421;FS=4.352;HRun=0;HaplotypeScore=174.9215;InbreedingCoeff=0.9257;MQ=53.97;MQ0=0;MQRankSum=-6.170;QD=38.63;ReadPosRankSum=-0.179;VQSLOD=3.4403;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,8:9:24.08:588,24,0	1/1:3,3:6:6.02:147,6,0	0/0:16,0:13:15.05:0,15,247	0/0:13,0:10:12.03:0,12,204	0/0:17,0:17:26.58:0,27,410	0/0:11,0:11:27.02:0,27,422	0/0:18,0:18:45.14:0,45,726	0/0:17,0:17:45.13:0,45,710	0/0:11,0:11:30.10:0,30,511	0/0:18,0:18:48.15:0,48,728	0/0:13,0:13:18.06:0,18,305	0/0:17,0:17:45.14:0,45,742	0/0:20,0:20:45.15:0,45,750	0/0:24,0:24:51.17:0,51,849	1/1:10,6:16:18.06:444,18,0	1/1:5,10:15:32.14:750,32,0	0/0:8,0:8:15.05:0,15,252	0/0:4,0:4:9.03:0,9,138	0/0:15,0:15:33.10:0,33,506	0/0:31,0:31:69.71:0,70,1165	0/0:9,0:9:15.05:0,15,225	0/0:12,0:12:24.08:0,24,390	0/0:15,0:15:24.08:0,24,406	0/0:15,0:15:36.08:0,36,572	0/0:22,0:22:42.13:0,42,676	0/0:27,0:27:63.21:0,63,1032	0/0:22,0:22:54.18:0,54,903	./.
chr10	53016723	.	AGGAGAGGGGGGAGG	A	4405	PASS	AC=14;AF=0.259;AN=54;BaseQRankSum=1.650;DP=248;FS=20.121;HRun=0;HaplotypeScore=129.0964;InbreedingCoeff=0.8193;MQ=74.55;MQ0=3;MQRankSum=-6.773;QD=51.22;ReadPosRankSum=2.604;VQSLOD=3.1307;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:4:6.01:0,6,230	0/0:2,0:2:3.01:0,3,130	0/0:18,0:12:21.99:0,22,500	0/0:22,0:16:12.99:0,13,879	0/0:6,0:5:9.03:0,9,615	0/0:7,0:7:15.05:0,15,696	0/0:6,0:6:15.04:0,15,486	0/0:10,0:10:11.52:0,12,448	0/0:4,0:4:12.04:0,12,596	1/1:8,5:13:22.31:870,22,0	1/1:6,4:10:15.04:407,15,0	0/0:11,0:11:27.08:0,27,734	0/0:11,0:11:27.06:0,27,909	0/0:11,0:11:24.08:0,24,1358	0/0:2,0:2:5.98:0,6,218	0/0:6,0:6:9.03:0,9,182	0/0:4,0:4:5.99:0,6,68	0/0:1,0:1:3.01:0,3,59	1/1:5,3:8:18.05:460,18,0	1/1:14,2:16:21.06:544,21,0	./.	0/0:5,0:5:12.04:0,12,542	0/0:6,0:5:15.05:0,15,338	0/0:11,0:11:21.07:0,21,988	0/0:10,0:10:27.07:0,27,1432	1/1:15,2:17:36.10:843,36,0	1/1:10,5:15:30.09:919,30,0	1/1:0,7:7:9.03:363,9,0
chr10	53016728	.	AG	A	890.13	PASS	AC=14;AF=0.259;AN=54;BaseQRankSum=6.173;DP=258;FS=19.633;HRun=6;HaplotypeScore=86.4388;InbreedingCoeff=0.8339;MQ=73.88;MQ0=4;MQRankSum=-6.697;QD=11.13;ReadPosRankSum=2.397;VQSLOD=1.0461;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:5:9.02:0,9,104	0/0:2,0:2:3.01:0,3,39	0/0:19,0:12:19.16:0,19,212	0/0:25,0:16:30.45:0,30,316	0/0:6,0:5:9.03:0,9,118	0/0:9,0:9:21.06:0,21,261	0/0:6,0:6:15.04:0,15,183	0/0:16,0:16:7.17:0,7,112	0/0:4,0:4:12.04:0,12,158	1/1:8,4:12:20.85:124,21,0	1/1:6,3:9:14.13:109,14,0	0/0:13,0:13:33.04:0,33,383	0/0:11,0:11:30.03:0,30,345	0/0:10,0:10:24.08:0,24,313	0/0:4,0:4:11.95:0,12,117	0/0:6,0:6:12.04:0,12,155	0/0:3,0:3:5.99:0,6,59	0/0:1,0:1:3.01:0,3,35	1/1:4,3:7:16.14:121,16,0	1/1:7,7:14:20.19:167,20,0	./.	0/0:5,0:5:12.04:0,12,158	0/0:6,0:5:15.05:0,15,196	0/0:11,0:11:24.07:0,24,295	0/0:11,0:11:27.07:0,27,338	1/1:9,8:17:34.80:329,35,0	1/1:9,4:13:27.26:201,27,0	1/1:8,0:7:7.11:25,7,0
chr10	53016738	.	GGA	G	510.88	PASS	AB=0.914;AC=12;AF=0.214;AN=56;BaseQRankSum=7.799;DP=251;FS=8.422;HRun=0;HaplotypeScore=79.3762;InbreedingCoeff=0.3736;MQ=71.43;MQ0=5;MQRankSum=-6.933;QD=6.01;ReadPosRankSum=2.973;VQSLOD=2.0745;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:18.06:0,18,300	0/0:2,0:2:3.01:0,3,54	0/0:24,0:13:11.37:0,11,301	0/0:26,0:15:28.57:0,29,385	0/0:4,0:3:9.03:0,9,164	0/0:8,0:7:15.05:0,15,266	0/0:6,0:6:14.99:0,15,208	0/0:17,0:17:22.66:0,23,396	0/0:4,0:4:12.04:0,12,213	0/1:11,2:13:39.77:130,0,40	1/1:8,1:9:6.59:64,7,0	0/0:9,0:9:27.08:0,27,438	0/0:8,0:8:18.05:0,18,271	0/0:9,0:9:21.07:0,21,382	0/0:4,0:4:8.96:0,9,127	0/0:6,0:6:11.25:0,11,137	0/0:1,0:1:2.98:0,3,21	0/0:1,0:1:3.01:0,3,30	0/1:11,0:11:15.92:16,0,87	0/1:11,1:12:37.27:99,0,37	1/1:10,0:9:1.77:10,2,0	0/0:5,0:5:15.05:0,15,246	0/0:5,0:4:11.95:0,12,118	0/0:8,0:8:18.06:0,18,313	0/0:10,0:10:27.08:0,27,460	0/1:11,2:13:10.37:160,0,10	1/1:7,2:9:20.14:148,20,0	1/1:8,0:7:8.39:39,8,0
chr10	53016740	.	A	AG	456.68	PASS	AB=0.887;AC=9;AF=0.161;AN=56;BaseQRankSum=4.222;DP=249;FS=2.958;HRun=4;HaplotypeScore=76.8184;InbreedingCoeff=0.0839;MQ=69.93;MQ0=5;MQRankSum=-4.192;QD=6.92;ReadPosRankSum=-2.332;VQSLOD=-0.5376;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:8:18.06:0,18,233	0/0:2,0:2:3.01:0,3,39	0/0:23,0:13:9.34:0,9,162	0/0:25,0:14:26.96:0,27,246	0/0:4,0:3:9.03:0,9,117	0/0:7,0:6:15.05:0,15,191	0/0:7,0:7:15.01:0,15,175	0/0:18,0:18:25.68:0,26,334	0/0:4,0:4:12.04:0,12,156	0/1:12,1:13:63.47:63,0,152	1/1:8,0:8:1.43:49,1,0	0/0:9,0:9:27.09:0,27,344	0/0:11,0:11:23.96:0,24,272	0/0:9,0:9:21.07:0,21,272	0/0:3,0:3:8.70:0,9,89	0/0:6,0:6:11.14:0,11,148	0/0:1,0:1:2.22:0,2,7	1/1:1,0:1:0.47:1,0,0	0/1:12,0:12:14.57:15,0,191	0/1:7,5:12:99:107,0,100	0/0:10,0:9:4.93:0,5,35	0/0:5,0:5:15.05:0,15,194	0/0:5,0:4:12.02:0,12,134	0/0:6,0:6:18.06:0,18,233	0/0:10,0:10:27.09:0,27,349	0/1:9,3:12:55.21:235,0,55	0/1:8,0:8:9.33:109,0,9	0/0:8,0:7:7.11:0,7,24
chr10	53017546	.	ACCTCTCC	A	1147.80	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.611;DP=803;FS=0.000;HRun=0;HaplotypeScore=180.4831;InbreedingCoeff=0.9989;MQ=88.96;MQ0=0;MQRankSum=-6.616;QD=32.79;ReadPosRankSum=0.752;VQSLOD=2.9343;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,129,4913	0/0:14,0:14:42.14:0,42,1593	0/0:31,0:31:84.26:0,84,2924	0/0:31,0:31:64.83:0,65,2323	0/0:26,0:26:78.25:0,78,2907	0/0:29,0:29:84.29:0,84,3289	0/0:29,0:29:84.29:0,84,3082	0/0:35,0:35:96.33:0,96,3510	0/0:23,0:23:66.23:0,66,2516	0/0:33,0:33:93.31:0,93,3453	0/0:27,0:27:75.24:0,75,2819	0/0:32,0:32:96.33:0,96,3684	0/0:29,0:29:87.30:0,87,3288	0/0:36,0:36:99:0,105,3945	0/0:33,0:33:96.32:0,96,3691	0/0:35,0:35:99:0,105,3973	1/1:6,13:19:27.05:634,27,0	1/1:1,15:16:27.05:635,27,0	0/0:18,0:18:51.16:0,51,1746	0/0:33,0:33:93.32:0,93,3612	0/0:39,0:39:99:0,111,4364	0/0:34,0:34:99:0,102,3825	0/0:26,0:26:75.24:0,75,2806	0/0:22,0:22:66.23:0,66,2597	0/0:24,0:23:66.20:0,66,2466	0/0:24,0:24:72.25:0,72,2830	0/0:47,0:47:99:0,132,5209	0/0:14,0:14:39.13:0,39,1546
chr10	53018438	.	T	TTTTG	13881.26	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-15.374;DP=705;FS=1.987;HRun=0;HaplotypeScore=94.9434;InbreedingCoeff=0.9715;MQ=65.50;MQ0=3;MQRankSum=2.187;QD=37.12;ReadPosRankSum=-0.737;VQSLOD=4.7978;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,113,1852	0/0:9,0:9:21.06:0,21,318	0/0:25,0:20:12.67:0,13,373	0/0:19,0:16:24.08:0,24,359	1/1:4,23:26:69.15:1403,69,0	1/1:6,20:27:45.15:1091,45,0	1/1:1,10:11:18.06:436,18,0	1/1:13,19:32:51.98:939,52,0	1/1:6,23:29:36.12:864,36,0	1/1:8,19:30:66.19:1411,66,0	1/1:5,15:24:36.03:772,36,0	0/0:16,0:16:36.11:0,36,563	0/0:25,0:25:54.18:0,54,874	1/1:8,23:31:48.16:1149,48,0	0/0:33,0:33:72.24:0,72,1140	0/0:31,0:30:69.24:0,69,1119	0/0:28,0:28:60.02:0,60,887	0/0:15,0:15:5.92:0,6,229	1/1:9,13:23:42.09:750,42,0	1/1:2,21:26:63.14:1289,63,0	1/1:4,16:20:30.10:727,30,0	0/0:29,0:29:75.24:0,75,1173	0/0:18,0:18:39.10:0,39,564	0/0:32,0:32:66.18:0,66,995	1/1:2,24:28:45.15:1090,45,0	1/1:8,16:25:51.15:1015,51,0	1/1:14,17:32:30.10:727,30,0	1/1:0,4:4:9.03:218,9,0
chr10	53019266	.	TA	T	6485.94	PASS	AB=0.950;AC=30;AF=0.536;AN=56;BaseQRankSum=14.732;DP=640;FS=3.074;HRun=10;HaplotypeScore=65.3070;InbreedingCoeff=0.8775;MQ=66.62;MQ0=0;MQRankSum=-0.645;QD=18.75;ReadPosRankSum=2.956;VQSLOD=5.8041;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,12:14:35.99:313,36,0	1/1:1,13:14:35.99:313,36,0	0/1:10,0:10:6.66:7,0,148	0/0:9,0:9:19.06:0,19,165	0/0:34,0:34:90.24:0,90,996	0/0:30,0:30:72.05:0,72,766	0/1:16,2:18:6.99:7,0,386	0/0:25,1:26:40.08:0,40,641	0/0:22,1:23:43.13:0,43,704	1/1:0,24:24:71.95:617,72,0	1/1:2,26:28:77.98:677,78,0	0/0:22,0:22:51.14:0,51,564	0/0:30,1:31:61.17:0,61,895	0/0:19,0:19:48.11:0,48,522	1/1:4,26:30:68.98:599,69,0	1/1:3,28:31:80.98:703,81,0	1/1:1,0:9:14.26:42,14,0	1/1:1,0:14:24.44:72,24,0	1/1:8,16:24:47.97:417,48,0	1/1:4,26:30:74.97:651,75,0	1/1:1,14:15:35.99:312,36,0	0/0:31,0:31:78.21:0,78,861	0/0:34,0:35:96.03:0,96,1028	0/0:13,0:13:36.10:0,36,398	0/0:21,0:21:60.13:0,60,641	1/1:8,27:36:82.04:689,82,0	1/1:3,32:35:89.97:781,90,0	1/1:0,14:14:32.78:286,33,0
chr10	53019628	.	T	TCC	2262.70	PASS	AB=0.794;AC=16;AF=0.286;AN=56;BaseQRankSum=6.223;DP=628;FS=4.902;HRun=0;HaplotypeScore=130.9460;InbreedingCoeff=0.8271;MQ=64.38;MQ0=15;MQRankSum=2.948;QD=12.64;ReadPosRankSum=-3.405;VQSLOD=2.3337;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:21:20.87:0,21,173	0/0:0,0:14:17.89:0,18,132	0/0:37,0:10:29.55:0,30,369	0/1:40,0:15:13.19:13,0,280	0/0:21,0:20:31.19:0,31,552	0/0:15,0:15:39.11:0,39,572	0/0:20,0:20:48.11:0,48,726	0/0:40,0:40:99:0,111,1530	0/0:20,0:20:48.69:0,49,582	1/1:6,15:20:43.82:517,44,0	1/1:14,2:16:24.60:232,25,0	0/0:32,0:32:93.09:0,93,1404	0/0:29,0:29:81.20:0,81,1167	0/0:24,0:23:12.82:0,13,432	0/0:5,0:35:59.31:0,59,428	0/0:2,0:27:29.89:0,30,230	0/0:10,0:11:26.75:0,27,199	0/0:9,0:8:20.78:0,21,147	1/1:0,9:10:26.92:300,27,0	1/1:4,17:22:31.16:271,31,0	1/1:2,15:17:13.29:224,13,0	0/0:26,0:26:69.19:0,69,1046	0/0:26,0:26:78.18:0,78,1166	0/0:22,0:22:60.17:0,60,908	0/0:19,0:19:25.62:0,26,408	1/1:4,13:17:43.16:468,43,0	1/1:4,21:26:22.89:363,23,0	0/1:3,7:10:8.77:74,0,9
chr10	53019636	.	T	TAC	2436.57	PASS	AB=0.918;AC=22;AF=0.423;AN=52;BaseQRankSum=-2.739;DP=689;FS=1.759;HRun=0;HaplotypeScore=136.6607;InbreedingCoeff=0.2082;MQ=61.65;MQ0=19;MQRankSum=3.623;QD=6.90;ReadPosRankSum=-1.350;VQSLOD=3.2859;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:8.48:0,8,41	0/0:14,0:14:14.20:0,14,70	./.	./.	0/1:11,18:28:3.29:369,0,3	0/1:16,1:17:15.89:16,0,227	0/0:10,0:19:19.89:0,20,97	0/1:29,0:36:21.42:40,0,21	1/1:10,11:22:4.15:448,4,0	1/1:22,0:21:20.94:220,21,0	0/1:20,0:20:34.45:65,0,34	0/0:28,0:31:56.15:0,56,556	0/0:28,0:28:49.50:0,49,554	1/1:7,19:25:26.57:398,27,0	0/0:29,0:30:31.25:0,31,154	0/0:25,0:25:22.63:0,23,110	0/1:13,0:13:6.17:6,0,35	0/1:13,0:13:15.72:51,0,16	1/1:15,0:14:6.48:66,6,0	0/1:28,0:28:6.08:113,0,6	0/1:23,0:23:3.08:165,0,3	0/0:28,1:30:57.72:0,58,562	0/0:30,1:31:3.93:0,4,493	0/0:24,0:25:42.30:0,42,406	0/1:10,17:27:91.35:282,0,91	1/1:23,0:23:8.17:83,8,0	1/1:25,0:25:7.47:258,7,0	0/1:12,0:12:16:30,0,16
chr10	53019830	.	AGT	A	2898.11	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=7.815;DP=683;FS=0.000;HRun=0;HaplotypeScore=120.1009;InbreedingCoeff=0.8916;MQ=55.10;MQ0=15;MQRankSum=-7.412;QD=14.79;ReadPosRankSum=0.061;VQSLOD=3.4334;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:55:91.98:0,92,1333	0/0:9,0:9:18.06:0,18,296	0/0:52,0:26:42.05:0,42,597	0/0:55,0:24:32.57:0,33,476	0/0:14,0:14:36.06:0,36,478	0/0:18,0:18:20.48:0,20,341	0/0:15,0:15:42.14:0,42,681	0/0:34,0:32:31.45:0,31,948	0/0:24,0:24:50.76:0,51,753	1/1:6,14:20:51.15:607,51,0	1/1:5,11:16:21.06:235,21,0	0/0:16,0:16:36.11:0,36,560	0/0:22,1:23:12.98:0,13,741	0/0:27,0:27:54.02:0,54,784	0/0:19,0:19:26.86:0,27,374	0/0:25,0:25:51.16:0,51,805	1/1:36,0:36:22.42:97,22,0	0/1:8,0:8:10.30:10,0,40	1/1:7,8:14:30.06:338,30,0	1/1:7,10:17:5.02:385,5,0	1/1:30,2:32:26.44:301,26,0	0/0:22,0:22:17.91:0,18,776	0/0:25,0:24:65.23:0,65,977	0/0:28,0:28:69:0,69,1043	0/0:24,0:24:55.44:0,55,808	1/1:14,8:22:50.91:568,51,0	1/1:11,8:20:45.31:464,45,0	1/1:6,4:10:10.27:102,10,0
chr10	53019841	.	GTGTA	G	2798.43	PASS	AB=0.933;AC=19;AF=0.339;AN=56;BaseQRankSum=13.646;DP=692;FS=0.369;HRun=0;HaplotypeScore=151.8176;InbreedingCoeff=0.7495;MQ=50.04;MQ0=21;MQRankSum=-7.978;QD=11.06;ReadPosRankSum=-1.750;VQSLOD=3.1072;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:46:78.56:0,79,1678	0/0:9,0:9:21.07:0,21,524	0/0:56,0:17:29.16:0,29,378	0/1:58,0:20:12.87:13,0,215	0/0:19,0:19:15.80:0,16,499	0/0:19,0:19:23.31:0,23,390	0/0:18,0:18:42.06:0,42,845	0/0:32,0:30:11.10:0,11,877	0/0:23,0:23:53.97:0,54,890	1/1:23,0:23:55.55:506,56,0	1/1:16,1:17:20.42:158,20,0	0/0:18,0:18:48.10:0,48,892	0/0:23,0:23:62.96:0,63,1163	0/0:25,0:25:51.82:0,52,918	0/0:21,0:21:35.89:0,36,568	0/0:26,0:26:57.09:0,57,1165	1/1:27,9:36:63.21:697,63,0	0/1:6,2:8:29.29:151,0,29	0/1:15,0:15:22.34:234,0,22	1/1:18,0:18:18.58:271,19,0	1/1:26,0:25:25.54:143,26,0	0/0:21,0:21:25.45:0,25,1114	0/0:25,0:24:65.96:0,66,1155	0/0:28,0:28:80.64:0,81,1457	0/0:28,0:28:38.09:0,38,1095	1/1:25,0:25:57.08:380,57,0	1/1:21,0:21:41:345,41,0	1/1:6,0:6:11.95:107,12,0
chr10	53019845	.	ATGTG	A	2630.37	PASS	AB=0.885;AC=18;AF=0.321;AN=56;BaseQRankSum=9.670;DP=694;FS=7.354;HRun=0;HaplotypeScore=154.9333;InbreedingCoeff=0.7607;MQ=48.79;MQ0=24;MQRankSum=-8.869;QD=13.09;ReadPosRankSum=1.657;VQSLOD=2.9896;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:74.63:0,75,1497	0/0:9,0:9:21.07:0,21,513	0/0:57,0:13:8.99:0,9,134	0/0:53,0:15:8.75:0,9,70	0/0:17,0:18:26.25:0,26,491	0/0:20,0:21:23.23:0,23,375	0/0:18,0:18:27.09:0,27,649	0/0:24,0:30:38.55:0,39,636	0/0:22,0:24:38.83:0,39,750	1/1:11,12:23:27.83:673,28,0	1/1:8,10:18:14.67:165,15,0	0/0:18,0:18:42.14:0,42,934	0/0:21,0:22:50.95:0,51,1081	0/0:22,0:24:35.85:0,36,752	0/0:18,0:19:29.80:0,30,552	0/0:25,0:25:48.16:0,48,1103	1/1:38,0:38:12.34:249,12,0	0/1:8,0:8:56.19:56,0,68	0/1:14,6:18:99:355,0,111	1/1:12,6:18:12.34:342,12,0	1/1:22,2:23:5.99:70,6,0	0/0:22,0:22:50.63:0,51,1049	0/0:24,0:23:41.91:0,42,896	0/0:27,0:28:62.93:0,63,1329	0/0:28,1:29:4.21:0,4,1022	1/1:18,7:25:25.51:368,26,0	1/1:13,8:21:26.94:385,27,0	1/1:1,5:6:12.04:166,12,0
chr10	53019887	.	A	ATGTGTGTGTGTGTG	6380.62	PASS	AB=0.677;AC=22;AF=0.393;AN=56;BaseQRankSum=-1.738;DP=669;FS=7.013;HRun=0;HaplotypeScore=268.1014;InbreedingCoeff=0.6706;MQ=51.76;MQ0=15;MQRankSum=-9.697;QD=21.56;ReadPosRankSum=-1.666;VQSLOD=2.5783;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:46:53.76:0,54,1669	0/0:1,0:9:18.06:0,18,537	0/0:36,0:8:6.01:0,6,109	0/0:42,0:9:8.93:0,9,104	0/0:3,0:17:19.92:0,20,122	0/1:6,0:23:1.46:1,0,148	0/0:2,0:18:35.13:0,35,304	0/0:26,0:26:14.11:0,14,1023	0/0:9,0:28:41.03:0,41,288	1/1:12,1:31:50.65:1849,51,0	1/1:8,0:23:3.01:188,3,0	0/0:25,0:26:48.15:0,48,1624	0/0:20,0:20:36.10:0,36,1252	0/1:5,0:26:17.53:18,0,242	0/0:2,0:20:36.12:0,36,1151	0/0:4,0:25:56.86:0,57,1656	1/1:16,0:30:26.26:457,26,0	1/1:4,0:9:9.01:161,9,0	1/1:18,0:15:24:753,24,0	1/1:7,0:18:2.99:188,3,0	0/1:19,0:19:0:0,0,0	0/0:15,0:18:36.12:0,36,1305	0/0:21,0:21:13.52:0,14,1251	0/0:20,0:20:42.12:0,42,1449	0/1:10,0:36:34.71:35,0,240	1/1:10,1:28:49.94:1692,50,0	1/1:8,0:26:15.52:831,16,0	1/1:5,0:8:6.44:208,6,0
chr10	53019889	.	G	GTGTGTA	4768.65	PASS	AB=0.967;AC=20;AF=0.357;AN=56;BaseQRankSum=8.811;DP=667;FS=15.320;HRun=0;HaplotypeScore=199.4193;InbreedingCoeff=0.1231;MQ=51.77;MQ0=16;MQRankSum=-3.290;QD=13.32;ReadPosRankSum=2.460;VQSLOD=3.2537;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:44:56.84:0,57,819	0/0:9,0:9:21.06:0,21,293	0/0:37,0:8:14:0,14,208	0/0:41,0:9:11.93:0,12,169	0/1:17,0:17:60.31:159,0,60	0/1:23,0:23:7.72:311,0,8	0/1:18,0:18:33.14:264,0,33	0/0:25,0:25:71.35:0,71,1009	0/1:28,0:28:99:292,0,151	0/1:31,0:31:14.85:795,0,15	1/1:23,0:23:3.01:56,3,0	0/0:26,0:26:66.13:0,66,1182	0/0:21,0:21:31.23:0,31,877	0/1:25,0:25:42.37:244,0,42	0/0:20,0:20:39.12:0,39,575	0/0:25,0:25:68.20:0,68,903	0/1:31,0:31:67.58:333,0,68	0/1:9,0:9:6.95:177,0,7	1/1:18,0:15:28.69:412,29,0	0/1:18,0:18:11.93:117,0,12	0/1:7,9:20:0:0,0,0	0/0:18,0:18:51.09:0,51,878	0/0:22,0:22:54.85:0,55,990	0/0:20,0:20:50.92:0,51,1011	0/1:36,0:36:61.80:423,0,62	0/1:27,0:27:7.22:629,0,7	1/1:26,0:26:23.87:426,24,0	1/1:8,0:8:8.96:130,9,0
chr10	53019891	.	G	GTGTGTGTGTGTGTG	6511.83	PASS	AB=1.000;AC=21;AF=0.389;AN=54;BaseQRankSum=-2.059;DP=673;FS=8.052;HRun=0;HaplotypeScore=266.5100;InbreedingCoeff=0.6841;MQ=51.88;MQ0=15;MQRankSum=-9.417;QD=23.59;ReadPosRankSum=-1.203;VQSLOD=2.5183;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:42:54.08:0,54,1669	0/0:10,0:10:18.06:0,18,537	0/0:38,0:9:6.01:0,6,109	0/0:43,0:11:8.93:0,9,104	0/0:17,0:17:19.92:0,20,122	0/1:23,0:23:1.46:1,0,148	0/0:19,0:19:35.13:0,35,304	0/0:27,0:27:14.11:0,14,1023	0/0:28,0:28:41.03:0,41,288	1/1:32,0:32:51.09:1850,51,0	1/1:23,0:23:3.01:188,3,0	0/0:28,0:28:48.15:0,48,1624	0/0:22,0:22:36.10:0,36,1252	0/1:25,0:25:17.53:18,0,242	0/0:19,0:19:36.12:0,36,1151	0/0:25,0:25:56.86:0,57,1656	1/1:29,0:29:26.26:457,26,0	1/1:11,0:11:9.01:161,9,0	1/1:13,2:18:30.02:884,30,0	1/1:18,0:18:2.99:188,3,0	./.	0/0:17,0:17:36.12:0,36,1305	0/0:22,0:22:13.99:0,14,1251	0/0:20,0:20:42.12:0,42,1449	0/1:33,0:33:34.71:35,0,240	1/1:28,0:28:49.94:1692,50,0	1/1:26,0:26:15.52:831,16,0	1/1:7,0:7:6.44:208,6,0
chr10	53020723	.	C	CTTGA	3063.14	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-8.073;DP=732;FS=0.615;HRun=0;HaplotypeScore=123.2499;InbreedingCoeff=0.9970;MQ=85.01;MQ0=0;MQRankSum=-9.445;QD=72.93;ReadPosRankSum=-3.980;VQSLOD=4.4229;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:87.30:0,87,1809	0/0:9,0:9:27.09:0,27,555	0/0:31,0:32:84.29:0,84,1739	0/0:26,0:26:66.21:0,66,1279	0/0:29,0:29:87.26:0,87,1768	0/0:30,0:30:84.26:0,84,1672	0/0:23,0:23:69.21:0,69,1357	1/1:8,32:42:99:3158,114,0	0/0:29,0:29:87.30:0,87,1823	0/0:19,0:19:57.20:0,57,1180	0/0:28,0:28:81.26:0,81,1633	0/0:37,0:37:99:0,111,2271	0/0:30,0:30:87.30:0,87,1809	0/0:25,0:25:75.26:0,75,1572	0/0:32,0:32:96.33:0,96,2013	0/0:19,0:19:57.20:0,57,1195	0/0:22,0:22:61.59:0,62,1278	0/0:18,0:17:51.13:0,51,992	0/0:23,0:23:69.18:0,69,1350	0/0:26,0:26:75.26:0,75,1561	0/0:28,0:28:84.24:0,84,1578	0/0:19,0:19:57.20:0,57,1195	0/0:26,0:26:78.27:0,78,1635	0/0:21,0:21:63.20:0,63,1281	0/0:29,0:29:84.25:0,84,1673	0/0:39,0:39:99:0,114,2382	0/0:34,0:34:99:0,99,2034	0/0:8,0:8:24.08:0,24,503
chr10	53021827	.	G	GA	21786.48	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=-15.261;DP=746;FS=3.172;HRun=0;HaplotypeScore=63.7797;InbreedingCoeff=0.9893;MQ=82.10;MQ0=0;MQRankSum=-5.051;QD=38.63;ReadPosRankSum=3.287;VQSLOD=5.3577;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,50:50:99:1976,132,0	1/1:1,14:15:36.12:529,36,0	0/0:29,0:29:84.22:0,84,1088	0/0:18,0:18:38.88:0,39,575	1/1:0,33:33:90.23:1312,90,0	1/1:0,29:29:78.26:1167,78,0	1/1:0,28:28:72.24:1076,72,0	1/1:1,30:31:90.25:1270,90,0	1/1:0,25:25:66.22:987,66,0	1/1:0,36:36:99:1546,108,0	1/1:0,23:23:63.21:943,63,0	0/0:28,0:28:84.26:0,84,1142	0/0:25,0:25:69.19:0,69,924	1/1:1,24:25:69.23:1032,69,0	1/1:1,41:42:99:1483,99,0	1/1:0,25:25:66.22:988,66,0	1/1:1,22:23:48.16:718,48,0	1/1:0,13:13:30.10:449,30,0	1/1:0,24:24:72.19:1001,72,0	1/1:3,22:25:72.23:1044,72,0	1/1:0,26:26:57.19:853,57,0	0/0:33,0:33:99:0,99,1322	0/0:28,0:28:84.26:0,84,1142	0/0:21,0:21:63.19:0,63,847	1/1:0,21:20:36.12:539,36,0	1/1:0,34:34:99:1486,102,0	1/1:0,33:33:84.28:1253,84,0	1/1:0,3:3:9.03:135,9,0
chr10	53022150	.	TGGAACTTACA	T	1257.74	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.828;DP=616;FS=9.677;HRun=0;HaplotypeScore=215.0434;InbreedingCoeff=0.8603;MQ=77.50;MQ0=0;MQRankSum=-5.921;QD=44.92;ReadPosRankSum=0.511;VQSLOD=1.9525;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,102,5104	0/0:10,0:10:30.10:0,30,1580	0/0:22,0:22:60.01:0,60,2436	0/0:13,0:13:33.09:0,33,1527	0/0:23,0:23:69.24:0,69,3479	0/0:16,0:16:48.16:0,48,2478	0/0:25,0:25:72.25:0,72,3350	0/0:29,0:29:84.29:0,84,3932	0/0:19,0:19:57.20:0,57,2972	0/0:33,0:33:96.33:0,96,4662	0/0:23,0:23:69.24:0,69,3329	0/0:18,0:18:54.19:0,54,2730	0/0:29,0:29:84.29:0,84,3825	0/0:26,0:26:75.26:0,75,3790	0/0:37,0:37:99:0,99,5060	0/0:21,0:21:60.18:0,60,2676	1/1:5,18:21:36.12:1173,36,0	1/1:2,3:5:6.02:196,6,0	0/0:16,0:16:48.16:0,48,2058	0/0:27,0:27:78.22:0,78,3950	0/0:18,0:18:51.16:0,51,2280	0/0:18,0:18:51.15:0,51,2442	0/0:24,0:24:72.22:0,72,3444	0/0:19,0:19:57.20:0,57,2876	0/0:30,0:30:84.29:0,84,4175	0/0:29,0:29:81.28:0,81,4156	0/0:26,0:26:75.26:0,75,3883	0/0:1,0:1:3.01:0,3,158
chr10	53022758	.	TG	T	12954.64	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=14.086;DP=877;FS=0.518;HRun=2;HaplotypeScore=90.6997;InbreedingCoeff=0.9752;MQ=78.44;MQ0=0;MQRankSum=-0.592;QD=36.19;ReadPosRankSum=3.279;VQSLOD=5.2809;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,42:45:99:1636,126,0	1/1:0,13:13:39.13:506,39,0	0/0:25,0:25:71.90:0,72,906	0/0:21,0:20:60.15:0,60,830	1/1:1,30:31:81.26:1050,81,0	1/1:0,26:26:75.24:974,75,0	1/1:2,27:29:75.24:974,75,0	1/1:0,36:36:99:1388,108,0	1/1:1,27:28:75.23:974,75,0	0/0:34,0:33:93.32:0,93,1394	0/0:27,0:27:78.24:0,78,1130	0/0:56,0:56:99:0,166,2435	0/0:36,0:36:99:0,108,1553	1/1:0,38:38:99:1441,111,0	1/1:1,45:46:99:1636,126,0	1/1:0,42:42:99:1519,117,0	0/0:35,0:35:99:0,105,1574	0/0:23,0:23:69.21:0,69,1011	0/0:23,0:23:69.20:0,69,994	0/0:32,0:31:87.28:0,87,1285	0/0:62,0:62:99:0,187,2764	0/0:21,0:21:60.19:0,60,878	0/0:22,0:22:60.19:0,60,880	0/0:26,0:26:78.26:0,78,1169	1/1:0,24:24:66.21:857,66,0	0/0:37,0:37:99:0,105,1556	0/0:36,0:36:99:0,108,1616	0/0:3,0:3:3.01:0,3,45
chr10	53023153	.	A	AG	957.98	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=10.031;DP=523;FS=26.179;HRun=1;HaplotypeScore=59.1838;InbreedingCoeff=0.9906;MQ=90.07;MQ0=0;MQRankSum=-3.270;QD=25.21;ReadPosRankSum=1.737;VQSLOD=2.1746;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:60.20:0,60,835	0/0:10,0:10:30.10:0,30,420	0/0:25,0:25:75.25:0,75,1031	0/0:16,0:16:44.88:0,45,582	0/0:32,0:32:96.31:0,96,1326	0/0:21,0:21:60.18:0,60,806	0/0:19,0:19:54.18:0,54,755	0/0:34,0:34:99:0,102,1412	0/0:15,0:15:45.15:0,45,629	0/0:18,0:18:48.16:0,48,670	0/0:16,0:16:45.14:0,45,612	0/0:11,0:11:33.11:0,33,462	0/0:18,0:18:54.18:0,54,755	0/0:17,0:17:48.16:0,48,669	0/0:10,0:10:30.10:0,30,419	0/0:20,0:20:60.16:0,60,803	1/1:1,23:24:72.08:698,72,0	1/1:1,13:14:39.05:381,39,0	0/0:12,0:12:36.12:0,36,501	0/0:24,0:24:72.22:0,72,974	0/0:18,0:18:54.18:0,54,755	0/0:15,0:15:45.15:0,45,627	0/0:9,0:9:27.09:0,27,377	0/0:22,0:21:66.22:0,66,921	0/0:22,0:21:66.22:0,66,923	0/0:23,0:23:69.22:0,69,950	0/0:33,0:33:99:0,99,1382	0/0:5,0:5:15.05:0,15,210
chr10	53023154	.	A	AG	930.75	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=10.041;DP=524;FS=26.557;HRun=0;HaplotypeScore=59.4603;InbreedingCoeff=0.9906;MQ=90.67;MQ0=0;MQRankSum=-5.790;QD=25.16;ReadPosRankSum=1.561;VQSLOD=2.3659;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:60.18:0,60,816	0/0:10,0:10:30.10:0,30,419	0/0:26,0:26:75.19:0,75,990	0/0:16,0:16:45.04:0,45,582	0/0:32,0:32:96.31:0,96,1322	0/0:20,0:20:57.17:0,57,775	0/0:19,0:19:57.17:0,57,775	0/0:34,0:34:99:0,102,1411	0/0:15,0:15:45.15:0,45,622	0/0:18,0:18:54.17:0,54,726	0/0:16,0:16:48.14:0,48,639	0/0:12,0:12:33.11:0,33,460	0/0:18,0:18:54.18:0,54,755	0/0:16,0:16:48.16:0,48,670	0/0:10,0:10:30.09:0,30,402	0/0:20,0:20:57.17:0,57,778	1/1:1,23:24:72.06:694,72,0	1/1:0,13:13:38.99:359,39,0	0/0:15,0:15:39.12:0,39,529	0/0:23,0:23:69.22:0,69,948	0/0:18,0:18:54.18:0,54,755	0/0:15,0:15:45.15:0,45,627	0/0:9,0:9:27.08:0,27,360	0/0:22,0:21:66.19:0,66,881	0/0:22,0:21:66.22:0,66,923	0/0:23,0:23:66.22:0,66,923	0/0:33,0:33:99:0,99,1346	0/0:5,0:5:15.05:0,15,210
chr10	53023659	.	G	GACA	29428.09	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=-15.318;DP=708;FS=3.928;HRun=0;HaplotypeScore=86.0615;InbreedingCoeff=0.9991;MQ=84.06;MQ0=0;MQRankSum=-8.195;QD=55.01;ReadPosRankSum=3.253;VQSLOD=6.8709;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,18:19:48.16:1058,48,0	1/1:0,16:16:45.15:1005,45,0	0/0:20,0:20:56:0,56,859	0/0:31,0:31:67.40:0,67,999	1/1:2,35:37:96.33:2140,96,0	1/1:3,22:27:66.23:1474,66,0	1/1:2,19:22:57.20:1271,57,0	1/1:6,29:37:96.27:1935,96,0	1/1:6,19:25:51.17:1137,51,0	1/1:4,27:31:84.28:1824,84,0	1/1:4,25:30:75.26:1674,75,0	0/0:29,0:29:81.27:0,81,1297	0/0:28,0:28:84.29:0,84,1370	1/1:3,23:26:72.25:1598,72,0	1/1:3,24:28:69.24:1540,69,0	1/1:6,30:36:78.27:1741,78,0	1/1:1,16:18:45.15:1004,45,0	1/1:1,10:12:30.06:620,30,0	1/1:3,20:23:66.18:1363,66,0	1/1:1,36:39:99:2380,111,0	1/1:1,17:18:42.14:938,42,0	0/0:22,0:22:63.20:0,63,994	0/0:28,0:28:81.28:0,81,1319	0/0:15,0:15:42.14:0,42,686	1/1:2,14:17:42.14:938,42,0	1/1:3,24:28:78.17:1579,78,0	1/1:10,26:39:78.27:1740,78,0	1/1:0,7:7:21.07:469,21,0
chr10	53024280	.	A	AAT	7267.61	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-13.865;DP=627;FS=3.113;HRun=0;HaplotypeScore=71.9937;InbreedingCoeff=0.9884;MQ=73.23;MQ0=1;MQRankSum=0.366;QD=39.93;ReadPosRankSum=0.771;VQSLOD=6.7874;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:93.29:0,93,1175	0/0:10,0:10:27.09:0,27,348	0/0:13,0:13:9.03:0,9,116	0/0:10,0:10:17.63:0,18,187	0/0:23,0:23:66.21:0,66,837	0/0:20,0:20:51.14:0,51,630	0/0:20,0:20:51.16:0,51,644	0/0:33,0:33:78.25:0,78,1004	0/0:16,0:16:42.12:0,42,526	1/1:1,18:18:51.17:861,51,0	1/1:3,15:19:42.14:694,42,0	0/0:22,0:22:66.19:0,66,824	0/0:29,0:29:72.23:0,72,927	0/0:31,0:31:93.28:0,93,1171	0/0:38,0:38:99:0,99,1260	0/0:31,0:31:69.22:0,69,875	0/0:24,0:24:60.15:0,60,737	0/0:14,0:14:33.11:0,33,421	1/1:6,19:26:60.19:987,60,0	1/1:5,21:26:57.19:949,57,0	1/1:1,17:18:48.16:810,48,0	0/0:15,0:15:36.12:0,36,463	0/0:17,0:17:48.15:0,48,606	0/0:16,0:16:39.08:0,39,483	0/0:26,0:26:69.22:0,69,888	1/1:3,18:21:54.18:905,54,0	1/1:9,33:42:96.33:1619,96,0	1/1:2,9:11:27.09:442,27,0
chr10	53024485	.	AACT	A	8373.29	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=-6.902;DP=485;FS=3.083;HRun=0;HaplotypeScore=86.8004;InbreedingCoeff=0.9447;MQ=67.58;MQ0=0;MQRankSum=-5.300;QD=41.45;ReadPosRankSum=-0.116;VQSLOD=5.7136;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:40.55:0,41,587	0/0:8,0:8:23.68:0,24,281	0/0:9,0:9:21:0,21,335	0/1:5,0:5:3.50:3,0,168	0/0:32,0:32:95.58:0,96,1309	0/0:20,0:20:53.69:0,54,754	0/0:9,0:9:24.08:0,24,327	0/0:30,0:30:71.11:0,71,909	0/0:13,0:13:39.12:0,39,530	1/1:0,20:20:60.20:975,60,0	1/1:1,14:15:33.07:531,33,0	0/0:9,0:9:27.09:0,27,593	0/0:27,0:27:81.28:0,81,1738	0/0:15,0:15:41.50:0,41,548	0/0:17,0:17:42.14:0,42,581	0/0:15,0:15:40.59:0,41,581	1/1:0,24:24:54.18:921,54,0	1/1:0,12:12:24.08:409,24,0	1/1:0,20:20:60.17:947,60,0	1/1:0,33:33:90.23:1461,90,0	1/1:0,10:10:24.08:385,24,0	0/0:11,0:11:33.10:0,33,635	0/0:22,0:22:66.23:0,66,1469	0/0:11,0:11:27.09:0,27,567	0/0:19,0:19:56.78:0,57,754	1/1:0,30:30:90.29:1462,90,0	1/1:0,23:23:48.16:819,48,0	1/1:0,10:10:27.09:460,27,0
chr10	53027889	.	A	AT	67.17	PASS	AB=0.714;AC=1;AF=0.018;AN=56;BaseQRankSum=3.690;DP=663;FS=4.154;HRun=0;HaplotypeScore=63.2125;InbreedingCoeff=-0.0183;MQ=61.39;MQ0=6;MQRankSum=-1.977;QD=6.72;ReadPosRankSum=-2.521;VQSLOD=2.7969;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:77.97:0,78,1029	0/0:9,0:9:27.09:0,27,377	0/0:16,0:11:26.49:0,26,414	0/0:20,0:18:53.64:0,54,676	0/0:38,0:38:99:0,111,1548	0/0:18,0:18:51.17:0,51,713	0/0:29,0:29:87.29:0,87,1216	0/0:26,0:26:78.25:0,78,1077	0/0:15,0:15:45.15:0,45,629	0/0:26,0:26:78.25:0,78,1053	0/0:19,0:19:57.15:0,57,762	0/0:21,0:21:63.21:0,63,881	0/0:32,0:32:96.30:0,96,1310	0/0:19,0:19:54.16:0,54,735	0/0:32,0:32:96.31:0,96,1326	0/0:27,0:27:78.25:0,78,1074	0/0:28,0:27:78.23:0,78,1056	0/0:18,0:18:51.17:0,51,711	0/0:24,0:24:72.23:0,72,991	0/0:40,0:40:99:0,120,1616	0/0:31,0:31:90.28:0,90,1225	0/0:20,0:20:60.19:0,60,822	0/0:20,0:20:60.20:0,60,839	0/0:12,0:12:36.11:0,36,486	0/0:22,0:22:66.06:0,66,837	0/0:31,0:30:93.31:0,93,1301	0/0:32,0:32:96.30:0,96,1312	0/1:6,4:9:99:142,0,183
chr10	53028516	.	TAA	T	7703.40	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-2.116;DP=495;FS=0.000;HRun=10;HaplotypeScore=84.3902;InbreedingCoeff=0.9836;MQ=67.48;MQ0=1;MQRankSum=0.880;QD=28.01;ReadPosRankSum=3.064;VQSLOD=5.0797;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:11:23.62:0,24,105	0/0:1,0:7:12.95:0,13,54	0/0:10,0:10:18.32:0,18,192	0/0:8,0:7:12.04:0,12,170	1/1:2,30:32:87.22:970,87,0	1/1:1,22:23:60.16:669,60,0	1/1:2,9:11:27.06:301,27,0	0/0:5,0:39:84.88:0,85,312	1/1:1,14:15:39.10:435,39,0	1/1:3,18:21:54.12:593,54,0	1/1:1,26:26:69.18:769,69,0	0/0:15,0:15:42.14:0,42,665	0/0:16,0:17:50.66:0,51,758	1/1:0,17:17:51.14:569,51,0	0/0:3,0:12:19.96:0,20,69	0/0:2,0:20:42.42:0,42,146	0/0:1,0:19:41.98:0,42,145	0/0:2,0:21:40.27:0,40,143	1/1:2,12:14:36.09:401,36,0	1/1:7,25:32:66.11:723,66,0	1/1:0,5:5:12.03:134,12,0	0/0:14,0:14:33.11:0,33,524	0/0:20,0:21:59.69:0,60,913	0/0:6,0:6:18.06:0,18,286	1/1:2,14:16:39.10:435,39,0	1/1:4,25:29:75.19:836,75,0	1/1:2,24:26:60.16:669,60,0	1/1:0,7:7:18.05:201,18,0
chr10	53028699	.	T	TA	11370.37	PASS	AB=0.560;AC=41;AF=0.732;AN=56;BaseQRankSum=10.952;DP=574;FS=3.713;HRun=0;HaplotypeScore=94.7531;InbreedingCoeff=0.9211;MQ=70.86;MQ0=0;MQRankSum=-3.331;QD=25.10;ReadPosRankSum=4.015;VQSLOD=5.7895;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,6:8:23.98:238,24,0	1/1:1,9:10:9.12:217,9,0	0/0:14,0:14:41.91:0,42,516	0/0:9,0:9:25.24:0,25,294	1/1:6,25:32:37.52:655,38,0	1/1:2,26:28:57.14:790,57,0	1/1:3,11:14:23.88:372,24,0	1/1:6,24:30:60.28:746,60,0	1/1:1,16:17:44.91:497,45,0	1/1:5,23:28:49.75:640,50,0	1/1:4,28:33:74.33:948,74,0	0/0:21,0:21:63.19:0,63,849	0/0:15,0:15:45.15:0,45,629	1/1:0,19:19:54.11:593,54,0	1/1:2,15:17:30.02:464,30,0	1/1:0,19:19:54.15:593,54,0	1/1:1,0:15:35.56:160,36,0	0/1:3,0:14:4.46:109,0,4	1/1:2,10:12:27.64:307,28,0	1/1:5,38:43:93.81:1174,94,0	1/1:0,13:13:36.10:403,36,0	0/0:24,0:24:72.22:0,72,970	0/0:27,0:27:81.26:0,81,1113	0/0:11,0:11:30.05:0,30,382	1/1:1,20:21:46.38:533,46,0	1/1:5,25:30:68.99:811,69,0	1/1:4,31:35:48.20:688,48,0	1/1:1,13:14:37.95:433,38,0
chr10	53028700	.	T	TAA	9842.25	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=12.906;DP=580;FS=0.000;HRun=8;HaplotypeScore=114.5404;InbreedingCoeff=0.9148;MQ=70.48;MQ0=0;MQRankSum=-0.805;QD=21.49;ReadPosRankSum=1.190;VQSLOD=3.4954;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,1:9:26.74:240,27,0	1/1:10,0:10:2.47:143,2,0	0/0:15,0:15:33.01:0,33,353	0/0:8,0:8:6.46:0,6,133	1/1:31,0:31:34.80:543,35,0	1/1:29,0:29:51.46:543,51,0	1/1:13,1:14:18.37:292,18,0	1/1:30,0:30:57.41:710,57,0	1/1:17,0:17:44.87:349,45,0	1/1:28,0:28:52.31:626,52,0	1/1:31,2:33:71.40:751,71,0	0/0:21,0:21:63.17:0,63,702	0/0:15,0:15:45.12:0,45,502	1/1:19,0:19:53.90:454,54,0	1/1:18,0:18:24.49:322,24,0	1/1:19,0:19:53.85:423,54,0	1/1:17,0:16:39.13:619,39,0	1/1:14,0:14:2.75:483,3,0	1/1:12,0:12:30.44:259,30,0	1/1:41,2:43:93.36:936,93,0	1/1:13,0:13:35.91:282,36,0	0/0:25,0:25:63.14:0,63,702	0/0:27,0:27:78.21:0,78,869	0/0:11,0:11:27.07:0,27,300	1/1:20,0:20:47.82:383,48,0	1/1:32,0:32:62.85:659,63,0	1/1:36,0:36:42.48:471,42,0	1/1:14,0:14:38.98:354,39,0
chr10	53029648	.	GAA	G	4789.30	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=5.967;DP=555;FS=2.101;HRun=10;HaplotypeScore=101.0398;InbreedingCoeff=0.9836;MQ=62.96;MQ0=4;MQRankSum=-5.042;QD=28.68;ReadPosRankSum=3.023;VQSLOD=5.1635;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:69.20:0,69,1033	0/0:6,0:6:12.04:0,12,190	0/0:18,0:17:32.30:0,32,434	0/0:12,0:13:24.66:0,25,292	0/0:23,0:24:62.65:0,63,903	0/0:19,0:20:60.20:0,60,924	0/0:13,0:13:24.08:0,24,379	0/0:29,0:29:62.69:0,63,936	0/0:15,0:15:27.09:0,27,424	1/1:5,18:22:63.16:695,63,0	1/1:5,21:23:66.18:735,66,0	0/0:17,0:18:45.15:0,45,694	0/0:19,0:21:62.18:0,62,915	0/0:19,0:19:42.14:0,42,659	0/0:23,0:23:63.18:0,63,954	0/0:27,0:27:66.21:0,66,1010	0/0:30,0:30:72.23:0,72,1095	0/0:28,0:27:63.20:0,63,955	1/1:9,14:23:56.96:594,57,0	1/1:7,24:31:81.21:902,81,0	1/1:1,5:6:12.03:134,12,0	0/0:12,0:12:36.12:0,36,566	0/0:23,0:23:66.19:0,66,966	0/0:6,0:6:12.04:0,12,190	0/0:17,0:17:39.09:0,39,586	1/1:2,23:25:72.18:793,72,0	1/1:1,19:19:51.14:568,51,0	1/1:2,11:13:33.09:368,33,0
chr10	53029662	.	G	GA	10811.40	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=-1.157;DP=588;FS=14.494;HRun=9;HaplotypeScore=80.4443;InbreedingCoeff=0.9441;MQ=63.41;MQ0=5;MQRankSum=-3.868;QD=23.15;ReadPosRankSum=0.380;VQSLOD=4.2106;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,21:25:63.16:688,63,0	1/1:0,5:5:11.99:119,12,0	0/0:20,0:18:18.60:0,19,179	0/0:12,0:11:2.04:0,2,113	1/1:6,22:28:51.10:551,51,0	1/1:5,15:20:48.10:518,48,0	1/1:0,16:16:39.11:431,39,0	1/1:5,26:30:78.20:854,78,0	1/1:2,18:21:38.94:412,39,0	1/1:7,19:26:63.16:684,63,0	1/1:5,23:24:63.17:696,63,0	0/0:19,0:19:53.97:0,54,465	0/0:24,0:24:59.97:0,60,521	1/1:2,15:17:39.11:431,39,0	1/1:2,19:21:54.15:597,54,0	1/1:2,24:26:66.18:730,66,0	1/1:5,0:29:59.66:309,60,0	1/1:2,1:27:54.18:289,54,0	1/1:6,16:22:54.14:590,54,0	1/1:10,22:32:46.06:704,46,0	1/1:1,4:5:12.03:133,12,0	0/0:18,0:18:47.76:0,48,399	0/0:20,0:20:40.05:0,40,406	0/0:7,0:7:17.99:0,18,156	1/1:3,15:18:13.05:372,13,0	1/1:9,19:28:43.11:683,43,0	1/1:9,18:26:51.13:556,51,0	1/1:0,14:14:42.11:464,42,0
chr10	53029904	.	C	CACAAGATCA	50439.10	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=-5.258;DP=611;FS=0.761;HRun=0;HaplotypeScore=162.1243;InbreedingCoeff=0.9790;MQ=77.85;MQ0=0;MQRankSum=-16.084;QD=109.89;ReadPosRankSum=0.315;VQSLOD=5.3252;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,5:21:30.10:1396,30,0	1/1:1,1:2:6.02:223,6,0	0/0:28,0:27:41.81:0,42,1602	0/0:24,0:22:54.12:0,54,1364	1/1:7,17:30:60.21:2686,60,0	1/1:9,9:22:48.16:2358,48,0	1/1:12,14:31:78.27:3695,78,0	1/1:12,13:31:81.22:3101,81,0	1/1:1,12:16:39.13:1903,39,0	1/1:6,19:32:96.32:4303,96,0	1/1:1,12:17:42.10:1864,42,0	0/0:24,0:24:69.21:0,69,2037	0/0:26,0:26:75.23:0,75,2243	1/1:4,18:24:60.21:2963,60,0	1/1:8,22:34:90.02:4205,90,0	1/1:4,16:24:60.14:2764,60,0	1/1:5,5:14:24.08:1187,24,0	1/1:4,4:9:21.07:916,21,0	1/1:4,5:13:33.11:1361,33,0	1/1:5,18:26:63.22:3101,63,0	1/1:2,5:10:21.07:947,21,0	0/0:20,0:20:60.20:0,60,1754	0/0:13,0:13:36.12:0,36,1137	0/0:16,0:17:51.17:0,51,1512	1/1:7,18:31:72.25:3477,72,0	1/1:7,13:28:69.24:2974,69,0	1/1:5,20:32:78.27:3679,78,0	1/1:0,9:11:27.09:1337,27,0
chr10	53031795	.	TTAAATAAATAAATAAA	T	3495.81	PASS	AC=14;AF=0.292;AN=48;BaseQRankSum=4.303;DP=327;FS=0.703;HRun=0;HaplotypeScore=152.7604;InbreedingCoeff=0.7897;MQ=67.68;MQ0=0;MQRankSum=-5.486;QD=38.00;ReadPosRankSum=1.977;VQSLOD=3.1831;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:27.08:0,27,1609	0/0:7,0:7:12.04:0,12,424	./.	0/0:11,0:5:1.82:0,2,5	0/0:10,0:10:15.05:0,15,950	0/0:16,0:16:33.11:0,33,2257	0/0:3,0:3:6.02:0,6,132	0/0:29,0:34:61.44:0,61,1890	0/0:11,0:11:15.05:0,15,927	1/1:11,6:17:27.09:934,27,0	1/1:5,4:9:9.03:223,9,0	0/0:9,0:12:6.02:0,6,259	0/0:9,0:11:6.02:0,6,171	0/0:10,0:10:9.02:0,9,397	0/0:15,0:15:18.06:0,18,1090	0/0:5,0:5:12.04:0,12,726	0/0:24,0:24:53.40:0,53,2574	0/0:9,0:9:21.07:0,21,1149	1/1:11,6:17:17.96:573,18,0	1/1:12,0:12:9.03:204,9,0	./.	./.	0/0:4,0:7:6.02:0,6,259	./.	0/0:9,0:9:9.02:0,9,436	1/1:4,12:16:36.12:993,36,0	1/1:8,8:16:12.04:527,12,0	1/1:5,0:5:3.01:42,3,0
chr10	53031826	.	A	AG	499.99	PASS	AB=0.974;AC=8;AF=0.148;AN=54;BaseQRankSum=-0.091;DP=291;FS=2.059;HRun=0;HaplotypeScore=80.0974;InbreedingCoeff=0.2561;MQ=56.17;MQ0=2;MQRankSum=-1.014;QD=8.20;ReadPosRankSum=-0.682;VQSLOD=3.2601;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:36.08:0,36,451	0/0:6,0:6:18.06:0,18,251	0/1:7,0:5:8.62:9,0,75	0/0:10,0:3:4.56:0,5,46	0/0:8,0:8:19.58:0,20,217	0/0:16,0:16:33.09:0,33,400	0/0:8,0:8:24.07:0,24,318	0/0:41,0:40:99:0,107,1409	0/0:5,0:5:15.05:0,15,194	0/1:15,2:17:96.29:96,0,337	0/1:7,0:7:77.33:77,0,78	0/0:6,0:6:14.82:0,15,142	0/0:7,0:7:17.95:0,18,226	0/0:6,0:6:18.01:0,18,213	0/0:6,0:6:18.06:0,18,251	0/0:6,0:6:18.05:0,18,234	0/0:25,0:25:69.23:0,69,954	0/0:12,0:12:36.10:0,36,484	0/0:17,0:17:42.60:0,43,490	1/1:0,3:3:9.03:143,9,0	0/0:2,0:2:6.01:0,6,68	./.	0/0:5,0:5:11.83:0,12,117	0/0:2,0:2:6.01:0,6,61	0/0:16,0:16:11.87:0,12,134	0/1:25,0:25:99:262,0,500	0/0:14,0:13:27.55:0,28,285	1/1:2,0:2:3.01:42,3,0
chr10	53031836	.	T	TAAAC	4382.01	PASS	AB=1.000;AC=32;AF=0.593;AN=54;BaseQRankSum=-4.037;DP=328;FS=0.000;HRun=0;HaplotypeScore=95.1646;InbreedingCoeff=0.2926;MQ=64.24;MQ0=2;MQRankSum=2.094;QD=15.65;ReadPosRankSum=-3.265;VQSLOD=3.3175;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:12,0:12:56.08:56,0,127	0/1:4,0:4:12.94:27,0,13	0/0:9,0:7:11.96:0,12,111	0/0:8,0:5:8.98:0,9,77	1/1:1,14:15:20.26:343,20,0	1/1:0,17:17:33.11:889,33,0	1/1:7,0:7:20.96:170,21,0	1/1:36,0:35:61.69:705,62,0	1/1:1,6:7:12.04:296,12,0	0/1:18,0:18:13.29:192,0,13	1/1:10,0:10:5.36:79,5,0	0/0:10,0:10:20.59:0,21,172	0/0:9,0:9:23.97:0,24,207	1/1:10,0:10:29.87:275,30,0	0/1:7,0:7:27.05:27,0,91	0/1:8,0:8:44.53:78,0,45	0/1:26,0:26:99:161,0,139	0/1:13,0:13:72.32:125,0,72	1/1:18,0:18:11.13:225,11,0	1/1:3,0:3:8.80:53,9,0	1/1:5,0:5:11.97:96,12,0	0/0:1,0:1:2.94:0,3,18	0/0:7,0:7:17.60:0,18,138	0/0:4,0:4:11.96:0,12,94	1/1:1,17:18:4.43:159,4,0	1/1:28,0:28:2.28:255,2,0	0/1:18,0:17:0.70:173,0,1	./.
chr10	53033432	.	TAA	T	4574.76	PASS	AB=0.583;AC=27;AF=0.500;AN=54;BaseQRankSum=-4.194;DP=410;FS=6.777;HRun=12;HaplotypeScore=59.9589;InbreedingCoeff=0.9063;MQ=52.92;MQ0=20;MQRankSum=2.063;QD=20.06;ReadPosRankSum=1.362;VQSLOD=3.8874;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,17:21:21.17:429,21,0	1/1:1,5:5:15.03:153,15,0	0/0:11,0:8:20.97:0,21,248	./.	1/1:1,20:21:57.05:567,57,0	1/1:4,13:17:33.32:388,33,0	1/1:5,3:9:11.74:102,12,0	1/1:7,17:24:39.01:396,39,0	1/1:1,10:11:24.03:244,24,0	0/0:9,0:16:19.96:0,20,70	0/0:4,0:18:32.30:0,32,124	0/0:11,0:11:30.07:0,30,423	0/0:18,0:18:44.63:0,45,628	1/1:5,15:18:42.09:427,42,0	1/1:1,16:17:45.09:458,45,0	1/1:1,16:16:48.11:488,48,0	1/1:1,15:15:39.09:397,39,0	1/1:2,6:6:15.03:153,15,0	0/0:4,0:14:27.96:0,28,133	0/0:3,0:19:35.09:0,35,141	0/0:3,0:9:17.47:0,17,61	0/0:10,0:9:27.09:0,27,403	0/0:14,0:14:42.14:0,42,626	0/0:16,0:15:34.89:0,35,471	1/1:9,13:19:36.04:366,36,0	0/0:2,0:17:37.43:0,37,131	0/1:4,1:12:7.55:8,0,47	0/0:0,0:3:4.99:0,5,18
chr10	53034649	.	CAA	C	7200.94	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=3.105;DP=597;FS=3.690;HRun=14;HaplotypeScore=81.2741;InbreedingCoeff=0.9271;MQ=79.65;MQ0=3;MQRankSum=-0.880;QD=18.14;ReadPosRankSum=5.268;VQSLOD=4.4367;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,34:38:34.65:695,35,0	1/1:1,4:8:2.47:106,2,0	0/0:28,0:21:11.80:0,12,281	0/0:23,1:19:13.80:0,14,126	1/1:5,11:17:34.78:311,35,0	1/1:3,19:21:51.03:471,51,0	1/1:3,13:18:35.34:348,35,0	1/1:1,13:16:38.40:376,38,0	1/1:4,24:28:65.99:610,66,0	1/1:8,15:26:56.18:475,56,0	1/1:2,8:10:14.95:185,15,0	0/0:20,0:22:61.61:0,62,716	0/0:27,0:30:76.50:0,77,921	1/1:4,23:27:47.99:444,48,0	1/1:3,19:23:47.76:428,48,0	1/1:3,13:20:29.24:339,29,0	0/0:26,0:30:76.15:0,76,903	0/0:13,0:16:41.09:0,41,503	1/1:4,13:17:38.97:361,39,0	1/1:8,17:27:35.43:341,35,0	1/1:1,14:15:33.03:305,33,0	0/0:15,1:18:13.82:0,14,435	0/0:9,0:11:32.08:0,32,392	0/0:18,0:21:52.60:0,53,608	1/1:4,8:15:2.51:168,3,0	1/1:7,18:27:41.54:475,42,0	1/1:4,25:30:62.71:567,63,0	1/1:5,7:12:20.93:194,21,0
chr10	53034834	.	AAACCAT	A	9224.77	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=14.068;DP=700;FS=5.369;HRun=0;HaplotypeScore=152.4989;InbreedingCoeff=0.9959;MQ=86.43;MQ0=0;MQRankSum=-11.939;QD=53.95;ReadPosRankSum=0.480;VQSLOD=4.8866;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,117,4006	0/0:8,0:8:18.06:0,18,613	0/0:30,0:28:75.22:0,75,2091	0/0:27,0:27:72.19:0,72,1917	0/0:24,0:24:63.22:0,63,2114	0/0:14,0:14:42.14:0,42,1453	0/0:32,0:32:93.31:0,93,3129	0/0:32,0:32:87.30:0,87,2856	0/0:26,0:26:78.27:0,78,2686	1/1:2,22:24:59.66:1263,60,0	1/1:5,17:22:54.14:1163,54,0	0/0:28,0:28:78.27:0,78,2735	0/0:31,0:31:90.31:0,90,3084	0/0:20,0:20:60.21:0,60,2098	0/0:31,0:31:90.31:0,90,3003	0/0:23,0:23:60.19:0,60,1979	0/0:29,0:29:84.26:0,84,2727	0/0:16,0:16:45.15:0,45,1518	1/1:4,13:17:39.13:885,39,0	1/1:1,23:24:63.14:1307,63,0	1/1:3,7:10:15.05:331,15,0	0/0:25,0:25:69.24:0,69,2337	0/0:27,0:27:75.26:0,75,2542	0/0:32,0:32:93.32:0,93,3142	0/0:26,0:26:75.26:0,75,2410	1/1:1,33:34:99:2271,99,0	1/1:4,26:30:57.06:1314,57,0	1/1:0,10:10:30.10:691,30,0
chr10	53035355	.	GTT	G	6215.21	PASS	AB=1.000;AC=46;AF=0.821;AN=56;BaseQRankSum=-2.605;DP=514;FS=0.438;HRun=3;HaplotypeScore=63.6967;InbreedingCoeff=0.5146;MQ=51.46;MQ0=30;MQRankSum=0.770;QD=14.39;ReadPosRankSum=-0.399;VQSLOD=1.5053;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:18:35.94:294,36,0	1/1:10,0:10:26.95:220,27,0	0/0:22,0:11:26.84:0,27,231	0/1:27,0:12:33.01:33,0,120	1/1:14,0:13:13.03:205,13,0	1/1:13,0:13:35.91:288,36,0	1/1:17,0:16:41.91:341,42,0	1/1:20,0:18:36.73:363,37,0	1/1:16,0:13:32.93:266,33,0	1/1:19,0:17:28.06:301,28,0	1/1:13,0:13:23.75:182,24,0	0/1:21,0:20:4.14:4,0,293	0/1:21,0:21:17.29:17,0,295	1/1:19,0:17:26.33:303,26,0	1/1:21,0:20:47.86:385,48,0	1/1:13,0:13:35.90:290,36,0	1/1:31,0:30:75.48:579,75,0	1/1:22,1:23:62.48:466,62,0	1/1:10,0:8:23.98:207,24,0	1/1:12,0:9:23.96:196,24,0	1/1:28,0:25:50.77:394,51,0	0/0:15,0:15:9.50:0,10,248	0/1:14,0:13:14.54:15,0,197	0/0:45,0:43:75.27:0,75,819	1/1:11,0:11:26.97:225,27,0	1/1:20,0:20:42.54:433,43,0	1/1:8,0:8:20.90:164,21,0	1/1:1,7:7:3.01:45,3,0
chr10	53036753	.	T	TC	14110.05	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-20.260;DP=824;FS=6.161;HRun=3;HaplotypeScore=75.8438;InbreedingCoeff=0.9997;MQ=81.98;MQ0=0;MQRankSum=-1.180;QD=36.94;ReadPosRankSum=1.828;VQSLOD=5.4512;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,44:46:99:1806,129,0	1/1:0,12:12:33.11:462,33,0	0/0:24,0:24:56.28:0,56,661	0/0:20,0:20:48.05:0,48,508	1/1:1,23:23:66.22:923,66,0	1/1:2,24:26:63.21:881,63,0	1/1:1,16:17:39.13:546,39,0	1/1:1,31:31:93.29:1284,93,0	1/1:2,32:34:70.15:1159,70,0	0/0:35,0:35:99:0,102,1203	0/0:16,0:16:48.15:0,48,575	0/0:30,0:30:90.26:0,90,1068	0/0:29,0:29:84.21:0,84,964	1/1:2,37:39:96.14:1344,96,0	1/1:1,38:40:99:1428,102,0	1/1:3,31:34:84.28:1175,84,0	1/1:1,34:35:99:1424,102,0	1/1:0,20:20:57.19:795,57,0	0/0:22,0:22:57.14:0,57,656	0/0:38,0:38:99:0,114,1346	0/0:42,0:42:99:0,120,1440	0/0:28,0:28:84.26:0,84,1008	0/0:30,0:30:87.25:0,87,1029	0/0:42,0:42:99:0,120,1427	1/1:1,22:23:63.21:882,63,0	0/0:46,0:46:99:0,132,1556	0/0:29,0:29:84.24:0,84,992	0/0:11,0:11:24.07:0,24,287
chr10	53039594	.	TCATGAAAG	T	11683.07	PASS	AC=14;AF=0.259;AN=54;BaseQRankSum=16.329;DP=671;FS=30.672;HRun=0;HaplotypeScore=187.7151;InbreedingCoeff=0.9995;MQ=87.79;MQ0=0;MQRankSum=-16.582;QD=72.12;ReadPosRankSum=-0.971;VQSLOD=3.0210;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,120,5129	0/0:13,0:13:39.13:0,39,1761	0/0:27,0:27:78.27:0,78,2899	0/0:27,0:27:71.81:0,72,2630	0/0:20,0:20:60.21:0,60,2634	0/0:22,0:22:66.23:0,66,2620	0/0:27,0:27:78.25:0,78,3163	0/0:36,0:36:99:0,102,3978	0/0:24,0:24:72.25:0,72,3203	1/1:3,25:28:69.24:2017,69,0	1/1:4,14:18:30.10:807,30,0	0/0:33,0:33:99:0,99,4200	0/0:31,0:31:93.31:0,93,3647	0/0:29,0:29:84.29:0,84,3680	0/0:32,0:32:93.32:0,93,4116	0/0:30,0:29:87.30:0,87,3810	0/0:24,0:24:72.25:0,72,3104	0/0:8,0:8:24.08:0,24,1026	1/1:1,13:14:39.13:1141,39,0	1/1:2,24:26:75.26:2143,75,0	1/1:2,22:24:48.25:1426,48,0	0/0:17,0:17:51.18:0,51,2235	0/0:26,0:26:78.24:0,78,3152	0/0:21,0:21:63.22:0,63,2840	0/0:21,0:21:60.21:0,60,2469	1/1:3,21:24:63.22:1790,63,0	1/1:3,25:28:84.29:2358,84,0	./.
chr10	53039595	.	CA	C	1540.19	PASS	AC=14;AF=0.259;AN=54;BaseQRankSum=17.613;DP=663;FS=27.567;HRun=1;HaplotypeScore=124.0715;InbreedingCoeff=0.9994;MQ=88.24;MQ0=0;MQRankSum=-16.516;QD=9.94;ReadPosRankSum=-1.218;VQSLOD=-0.1710;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,123,1936	0/0:13,0:13:39.13:0,39,619	0/0:27,0:27:80.35:0,80,1166	0/0:26,1:27:60.06:0,60,1086	0/0:21,0:21:60.20:0,60,959	0/0:22,0:22:66.23:0,66,1055	0/0:26,0:26:78.25:0,78,1222	0/0:36,0:36:99:0,105,1616	0/0:24,0:24:72.25:0,72,1151	1/1:25,0:25:61.44:249,61,0	1/1:15,1:16:27.28:168,27,0	0/0:33,0:33:99:0,99,1558	0/0:31,0:31:93.30:0,93,1461	0/0:29,0:29:84.29:0,84,1340	0/0:31,0:31:93.32:0,93,1486	0/0:30,0:29:90.29:0,90,1411	0/0:24,0:24:72.25:0,72,1148	0/0:8,0:8:24.08:0,24,384	1/1:13,0:13:34.88:143,35,0	1/1:24,2:26:67.05:328,67,0	1/1:23,1:24:40.92:199,41,0	0/0:17,0:17:51.17:0,51,815	0/0:26,0:26:78.24:0,78,1195	0/0:21,0:21:63.21:0,63,1007	0/0:20,0:20:60.20:0,60,959	1/1:22,1:23:56.23:256,56,0	1/1:28,0:28:75.66:394,76,0	./.
chr10	53039667	.	GT	G	6505.48	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=15.280;DP=733;FS=0.000;HRun=3;HaplotypeScore=89.6278;InbreedingCoeff=0.9992;MQ=76.17;MQ0=0;MQRankSum=-3.220;QD=33.02;ReadPosRankSum=1.586;VQSLOD=5.0353;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,144,2071	0/0:14,0:14:42.14:0,42,596	0/0:14,0:14:36.10:0,36,492	0/0:23,0:23:61.80:0,62,888	0/0:21,0:21:63.21:0,63,907	0/0:19,0:19:57.19:0,57,821	0/0:26,0:26:78.25:0,78,1104	0/0:36,0:36:99:0,105,1465	0/0:20,0:20:60.20:0,60,863	1/1:2,26:28:72.22:893,72,0	1/1:0,26:26:75.24:929,75,0	0/0:31,0:31:90.30:0,90,1272	0/0:24,0:24:72.22:0,72,1005	0/0:28,0:28:84.28:0,84,1209	0/0:39,0:39:99:0,114,1622	0/0:41,0:41:99:0,114,1642	0/0:30,0:30:87.28:0,87,1233	0/0:11,0:11:33.08:0,33,448	1/1:0,15:15:42.12:509,42,0	1/1:3,28:31:84.26:1032,84,0	1/1:3,21:24:60.19:743,60,0	0/0:27,0:27:78.26:0,78,1123	0/0:23,0:23:66.17:0,66,877	0/0:32,0:32:93.31:0,93,1338	0/0:28,0:28:81.26:0,81,1147	1/1:2,30:32:90.26:1100,90,0	1/1:4,30:34:84.26:1039,84,0	1/1:0,7:7:21.07:260,21,0
chr10	53040973	.	AAATGTCTT	A	11633.97	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=16.565;DP=630;FS=0.000;HRun=0;HaplotypeScore=166.0852;InbreedingCoeff=0.9887;MQ=90.04;MQ0=0;MQRankSum=-14.934;QD=73.17;ReadPosRankSum=1.910;VQSLOD=5.0857;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:75.26:0,75,3349	0/0:7,0:7:21.07:0,21,952	0/0:28,0:28:50.34:0,50,2919	0/0:29,0:28:78.16:0,78,2668	0/0:30,0:30:87.26:0,87,3763	0/0:39,0:39:99:0,114,4858	0/0:16,0:16:48.14:0,48,1889	0/0:26,0:26:75.26:0,75,3306	0/0:12,0:12:33.11:0,33,1410	1/1:0,26:27:78.23:2094,78,0	1/1:0,18:18:48.16:1370,48,0	0/0:23,0:23:69.23:0,69,2919	0/0:21,0:21:63.22:0,63,2811	0/0:30,0:30:90.30:0,90,3804	0/0:19,0:19:57.20:0,57,2567	0/0:23,0:23:69.24:0,69,3071	0/0:29,0:29:87.30:0,87,3784	0/0:10,0:10:30.09:0,30,1191	1/1:5,16:21:48.14:1244,48,0	1/1:2,26:28:75.26:2194,75,0	1/1:1,9:10:21.03:534,21,0	0/0:24,0:24:63.21:0,63,2593	0/0:32,0:32:90.31:0,90,3873	0/0:23,0:23:69.20:0,69,2896	0/0:25,0:25:75.25:0,75,3220	1/1:1,18:19:54.17:1478,54,0	1/1:1,30:31:84.29:2458,84,0	1/1:0,5:5:9.03:262,9,0
chr10	53041093	.	A	AAT	8211.11	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-14.294;DP=579;FS=0.731;HRun=0;HaplotypeScore=61.7856;InbreedingCoeff=0.9942;MQ=75.41;MQ0=7;MQRankSum=-1.921;QD=33.65;ReadPosRankSum=1.301;VQSLOD=6.4229;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,14:17:33.11:552,33,0	1/1:1,5:6:15.05:251,15,0	0/0:11,0:11:19.30:0,19,246	0/0:13,0:13:26.16:0,26,235	1/1:4,25:28:60.20:979,60,0	1/1:0,35:34:81.28:1354,81,0	1/1:3,8:11:21.07:351,21,0	1/1:11,20:32:60.19:976,60,0	1/1:6,11:16:27.09:451,27,0	0/0:28,0:28:69.21:0,69,869	0/0:24,0:25:69.01:0,69,807	0/0:19,0:19:42.12:0,42,521	0/0:20,0:20:51.12:0,51,618	1/1:2,22:23:57.19:941,57,0	1/1:5,24:28:57.19:952,57,0	1/1:6,17:22:42.14:702,42,0	0/0:10,0:10:27.09:0,27,343	0/0:15,0:15:27.09:0,27,344	0/0:22,0:22:54.14:0,54,670	0/0:24,0:24:66.21:0,66,840	0/0:22,0:22:57.17:0,57,712	0/0:22,0:22:66.18:0,66,802	0/0:22,0:22:60.15:0,60,734	0/0:10,0:10:18.06:0,18,229	1/1:3,16:20:42.06:703,42,0	0/0:29,0:29:87.06:0,87,1070	0/0:32,0:32:93.04:0,93,1137	0/0:11,0:11:24:0,24,274
chr10	53041249	.	TTGTGTGTGTGTGTGTGTGTGTG	T	5116.68	PASS	AB=0.773;AC=15;AF=0.313;AN=48;BaseQRankSum=5.384;DP=503;FS=16.105;HRun=0;HaplotypeScore=275.3847;InbreedingCoeff=0.8416;MQ=63.01;MQ0=7;MQRankSum=-5.457;QD=39.97;ReadPosRankSum=1.472;VQSLOD=2.3934;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	1/1:1,0:4:9.03:461,9,0	0/0:24,0:15:12.04:0,12,350	0/0:29,0:23:9.03:0,9,208	1/1:16,11:27:18.06:616,18,0	1/1:17,9:26:21.07:885,21,0	./.	./.	1/1:9,7:16:18.06:926,18,0	0/0:15,0:19:32.32:0,32,1261	0/0:6,0:12:21.07:0,21,874	0/0:12,0:13:14.88:0,15,1490	0/0:15,0:20:21.53:0,22,1159	1/1:8,5:13:15.05:641,15,0	1/1:9,0:14:14.72:536,15,0	1/1:5,0:11:9.03:449,9,0	0/0:10,0:10:5.97:0,6,57	0/0:12,0:11:9.03:0,9,217	0/0:19,0:21:31.65:0,32,1064	0/0:13,0:25:33.11:0,33,1319	0/0:13,0:13:12.01:0,12,559	0/0:16,0:22:25.64:0,26,2046	0/0:20,0:22:25.72:0,26,2443	0/0:15,0:22:29.91:0,30,2227	0/1:12,5:17:4.44:603,0,4	0/0:13,0:16:21.07:0,21,584	0/0:8,0:17:27.09:0,27,873	./.
chr10	53043508	.	A	ATTCTGG	16707.10	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-13.234;DP=701;FS=7.538;HRun=0;HaplotypeScore=148.0803;InbreedingCoeff=0.9767;MQ=85.74;MQ0=0;MQRankSum=-17.894;QD=91.30;ReadPosRankSum=-0.865;VQSLOD=6.0818;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,108,2507	0/0:8,0:8:24.08:0,24,544	0/0:24,0:24:66.21:0,66,1397	0/0:28,0:28:78.18:0,78,1756	0/0:38,0:38:99:0,111,2574	0/0:26,0:26:72.23:0,72,1657	0/0:20,0:20:60.21:0,60,1371	0/0:35,0:35:99:0,102,2367	0/0:21,0:21:60.21:0,60,1419	1/1:7,25:33:99:3360,99,0	1/1:7,16:24:63.22:2075,63,0	0/0:35,0:35:99:0,99,2321	0/0:24,0:24:69.22:0,69,1565	0/0:24,0:24:69.21:0,69,1498	0/0:30,0:30:90.31:0,90,2085	0/0:33,0:33:99:0,99,2195	0/0:31,0:31:90.30:0,90,2129	0/0:15,0:15:45.15:0,45,1039	1/1:3,9:14:33.11:1056,33,0	1/1:6,19:26:75.26:2510,75,0	1/1:1,4:8:12.04:355,12,0	0/0:22,0:22:63.21:0,63,1443	0/0:24,0:24:72.25:0,72,1702	0/0:20,0:20:51.15:0,51,1114	0/0:23,0:23:69.24:0,69,1632	1/1:5,22:28:84.25:2803,84,0	1/1:6,38:46:99:4335,123,0	1/1:0,3:3:6.02:213,6,0
chr10	53043908	.	C	CG	4717.26	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-2.352;DP=463;FS=0.838;HRun=0;HaplotypeScore=68.7874;InbreedingCoeff=0.9556;MQ=78.46;MQ0=0;MQRankSum=-1.132;QD=33.69;ReadPosRankSum=4.827;VQSLOD=4.4279;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:34.08:0,34,244	0/0:6,0:6:13:0,13,86	0/0:18,0:18:41.88:0,42,482	0/0:13,0:13:28.91:0,29,327	0/0:20,0:20:27.95:0,28,255	0/0:9,0:9:18.48:0,18,116	0/0:18,0:18:4:0,4,141	0/0:21,0:21:42.56:0,43,328	0/0:12,0:12:17.55:0,18,115	1/1:2,16:18:29.89:540,30,0	1/1:0,11:11:27.09:366,27,0	0/0:19,0:19:48.15:0,48,650	0/0:28,0:28:81.17:0,81,1034	0/0:14,0:14:17.97:0,18,161	0/0:14,0:14:23.01:0,23,141	0/0:12,0:12:19.50:0,20,101	0/0:22,0:22:59.20:0,59,807	0/0:18,0:18:51.11:0,51,668	1/1:1,13:14:39.02:494,39,0	1/1:0,17:17:42.13:568,42,0	1/1:0,28:28:66.22:909,66,0	0/0:12,0:12:36.11:0,36,477	0/0:13,0:13:30.10:0,30,418	0/0:21,0:20:60.16:0,60,770	0/0:10,0:10:8.96:0,9,73	1/1:0,18:18:53.75:640,54,0	1/1:1,21:21:54.16:744,54,0	1/1:0,12:12:33.11:456,33,0
chr10	53044940	.	AT	A	7305.97	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=17.341;DP=640;FS=2.276;HRun=1;HaplotypeScore=80.3258;InbreedingCoeff=0.9986;MQ=76.96;MQ0=1;MQRankSum=-0.806;QD=39.71;ReadPosRankSum=3.283;VQSLOD=5.5520;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:81.08:0,81,1152	0/0:14,0:14:42.13:0,42,648	0/0:16,0:16:48.11:0,48,714	0/0:13,1:14:31.76:0,32,513	0/0:30,0:30:87.28:0,87,1361	0/0:17,0:17:48.16:0,48,765	0/0:20,0:20:60.18:0,60,928	0/0:33,0:33:96.32:0,96,1513	0/0:22,0:22:66.16:0,66,1000	1/1:0,24:24:72.22:989,72,0	1/1:0,19:18:51.17:710,51,0	0/0:23,0:23:63.21:0,63,1006	0/0:16,0:16:48.16:0,48,767	0/0:23,0:23:69.24:0,69,1099	0/0:32,0:32:93.29:0,93,1437	0/0:41,0:41:99:0,123,1894	0/0:15,0:15:45.15:0,45,716	0/0:16,0:16:48.16:0,48,749	1/1:0,17:17:51.09:674,51,0	1/1:0,27:27:81.24:1112,81,0	1/1:0,28:28:81.27:1133,81,0	0/0:28,0:28:84.27:0,84,1305	0/0:28,0:28:84.25:0,84,1289	0/0:16,0:16:48.16:0,48,767	0/0:25,0:25:75.26:0,75,1195	1/1:0,29:29:87.26:1182,87,0	1/1:0,32:32:90.30:1254,90,0	1/1:0,8:8:18.06:252,18,0
chr10	53045079	.	T	TAC	20494.32	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=-3.740;DP=701;FS=9.376;HRun=0;HaplotypeScore=91.1603;InbreedingCoeff=0.9859;MQ=66.05;MQ0=7;MQRankSum=-0.800;QD=37.06;ReadPosRankSum=1.853;VQSLOD=7.0044;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,18:21:51.17:867,51,0	1/1:2,5:7:9.03:153,9,0	0/0:15,0:11:14.30:0,14,157	0/0:17,0:15:32.77:0,33,382	1/1:4,12:17:30.10:510,30,0	1/1:4,23:28:57.20:969,57,0	1/1:0,18:18:51.17:867,51,0	1/1:14,26:40:78.27:1315,78,0	1/1:3,20:23:51.17:867,51,0	1/1:4,28:31:81.26:1345,81,0	1/1:3,21:24:45.15:763,45,0	0/0:21,0:21:60.18:0,60,764	0/0:33,0:33:90.26:0,90,1139	1/1:4,23:26:57.20:968,57,0	1/1:3,21:25:63.22:1066,63,0	1/1:10,27:36:63.22:1071,63,0	1/1:2,15:18:36.12:612,36,0	1/1:0,26:24:54.18:918,54,0	1/1:6,25:32:78.22:1261,78,0	1/1:3,30:33:72.25:1221,72,0	1/1:1,21:22:42.14:714,42,0	0/0:27,0:27:72.22:0,72,923	0/0:21,0:21:60.16:0,60,749	0/0:14,0:14:42.09:0,42,499	1/1:4,24:28:63.22:1071,63,0	1/1:0,36:38:99:1851,114,0	1/1:4,31:36:84.29:1424,84,0	1/1:7,13:20:39.13:663,39,0
chr10	53051847	.	CAT	C	801.39	PASS	AC=8;AF=0.148;AN=54;BaseQRankSum=7.161;DP=268;FS=7.335;HRun=0;HaplotypeScore=30.9168;InbreedingCoeff=0.7482;MQ=60.30;MQ0=2;MQRankSum=-1.642;QD=33.39;ReadPosRankSum=1.173;VQSLOD=5.1685;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,7:8:24.06:316,24,0	1/1:0,1:1:3.01:42,3,0	./.	0/0:4,0:3:2.99:0,3,23	0/0:12,0:12:36.09:0,36,589	0/0:23,0:23:57.18:0,57,980	0/0:3,0:3:9.03:0,9,156	0/0:45,0:45:99:0,123,2026	0/0:10,0:10:21.05:0,21,339	0/0:8,0:8:24.08:0,24,402	0/0:7,0:7:21.07:0,21,365	0/0:5,0:5:15.05:0,15,264	0/0:6,0:6:18.06:0,18,324	0/0:5,0:5:15.05:0,15,262	1/1:0,4:4:12.04:168,12,0	1/1:1,10:10:30.10:420,30,0	0/0:18,0:18:51.17:0,51,890	0/0:18,0:18:51.15:0,51,885	0/0:15,0:15:42.13:0,42,689	0/0:8,0:8:21.07:0,21,378	0/0:1,0:1:3.01:0,3,54	0/0:5,0:5:15.05:0,15,270	0/0:2,0:2:6.02:0,6,108	0/0:1,0:1:3.01:0,3,54	0/0:18,0:18:54.17:0,54,942	0/0:7,0:7:21.06:0,21,343	0/0:4,0:4:12.04:0,12,216	0/0:16,0:16:42.14:0,42,756
chr10	53051932	.	A	AT	335.34	PASS	AC=8;AF=0.148;AN=54;BaseQRankSum=6.832;DP=275;FS=3.423;HRun=1;HaplotypeScore=36.0711;InbreedingCoeff=0.7324;MQ=66.55;MQ0=1;MQRankSum=-3.878;QD=11.98;ReadPosRankSum=-0.658;VQSLOD=1.6780;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,3:10:21.08:174,21,0	1/1:3,3:6:1.29:80,1,0	0/0:5,0:3:5.96:0,6,42	0/0:15,0:6:5.04:0,5,33	0/0:7,0:7:21.07:0,21,273	0/0:18,0:18:54.18:0,54,701	0/0:3,0:3:9.03:0,9,117	0/0:49,0:49:99:0,141,1805	0/0:6,0:6:18.06:0,18,229	0/0:16,0:16:48.16:0,48,623	0/0:9,0:9:27.09:0,27,349	0/0:5,0:5:12.04:0,12,156	0/0:4,0:4:12.04:0,12,156	0/0:6,0:6:18.06:0,18,234	1/1:2,3:5:12.01:124,12,0	1/1:5,1:5:8.99:95,9,0	0/0:17,0:17:51.16:0,51,654	0/0:20,0:20:60.16:0,60,761	0/0:9,0:9:24.08:0,24,310	0/0:5,0:5:12.03:0,12,142	0/0:1,0:1:3.01:0,3,39	./.	0/0:6,0:6:18.04:0,18,219	0/0:2,0:2:6.02:0,6,78	0/0:15,0:15:39.13:0,39,505	0/0:12,0:12:36.08:0,36,426	0/0:5,0:5:15.03:0,15,180	0/0:12,0:12:24.08:0,24,312
chr10	53051935	.	T	TATATA	981.46	PASS	AB=0.800;AC=9;AF=0.167;AN=54;BaseQRankSum=6.722;DP=266;FS=6.757;HRun=0;HaplotypeScore=52.1828;InbreedingCoeff=0.6937;MQ=63.52;MQ0=0;MQRankSum=-4.512;QD=32.72;ReadPosRankSum=0.266;VQSLOD=2.3798;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,3:12:17.57:385,18,0	1/1:3,3:6:18.05:352,18,0	0/1:3,0:2:15.93:24,0,16	0/0:14,0:5:5.69:0,6,50	0/0:7,0:7:21.07:0,21,482	0/0:18,0:18:54.18:0,54,1146	0/0:3,0:3:9.03:0,9,204	0/0:51,0:51:99:0,147,2687	0/0:6,0:6:15.05:0,15,290	0/0:16,0:16:48.16:0,48,995	0/0:9,0:9:27.09:0,27,539	0/0:5,0:5:15.05:0,15,290	0/0:4,0:4:12.04:0,12,280	0/0:6,0:6:18.06:0,18,383	1/1:1,3:4:9.03:242,9,0	1/1:2,1:4:5.78:129,6,0	0/0:17,0:17:51.12:0,51,1062	0/0:22,0:22:66.17:0,66,1358	0/0:8,0:8:21.07:0,21,471	0/0:4,0:4:12.04:0,12,244	0/0:1,0:1:3.01:0,3,70	./.	0/0:5,0:5:15.05:0,15,343	0/0:2,0:2:6.02:0,6,136	0/0:12,0:12:36.09:0,36,671	0/0:13,0:13:33.11:0,33,643	0/0:5,0:5:15.05:0,15,320	0/0:8,0:8:24.08:0,24,547
chr10	53052850	.	C	CCCTCCCT	6708.97	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-0.731;DP=597;FS=2.343;HRun=0;HaplotypeScore=155.5676;InbreedingCoeff=0.9296;MQ=71.59;MQ0=11;MQRankSum=-9.978;QD=47.25;ReadPosRankSum=-2.025;VQSLOD=4.5667;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:20:27.09:0,27,585	0/0:9,0:9:21.07:0,21,499	0/0:27,0:25:39.12:0,39,839	0/0:42,0:35:58.46:0,58,1209	0/0:25,0:25:57.17:0,57,1237	0/0:20,0:20:45.14:0,45,980	0/0:24,0:24:51.16:0,51,1154	0/0:27,0:27:30.10:0,30,652	0/0:14,0:14:42.14:0,42,1003	1/1:8,11:19:48.08:1370,48,0	1/1:15,3:20:15.05:437,15,0	0/0:33,0:33:87.23:0,87,1915	0/0:27,0:27:78.25:0,78,1800	0/0:31,0:30:84.25:0,84,1828	0/0:34,0:33:69.14:0,69,1436	0/0:28,0:23:35.94:0,36,800	0/0:13,0:12:30.09:0,30,669	0/0:6,0:6:12.04:0,12,287	1/1:12,8:22:46.90:1352,47,0	1/1:8,7:16:18.06:646,18,0	1/1:7,10:17:3.01:114,3,0	0/0:17,0:17:36.12:0,36,840	0/0:17,0:17:39.13:0,39,919	0/0:17,0:17:39.12:0,39,888	0/0:22,0:22:50.38:0,50,1155	1/1:16,11:28:42.08:1330,42,0	1/1:3,13:16:36.12:1346,36,0	1/1:3,1:4:3.01:114,3,0
chr10	53053170	.	GA	G	9007.22	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=13.458;DP=610;FS=2.669;HRun=7;HaplotypeScore=58.7829;InbreedingCoeff=0.9821;MQ=80.94;MQ0=1;MQRankSum=-2.970;QD=26.73;ReadPosRankSum=1.974;VQSLOD=5.7029;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,27:32:81.65:827,82,0	1/1:0,2:2:6.01:61,6,0	0/0:18,0:18:42.13:0,42,523	0/0:16,0:16:27.69:0,28,290	0/0:26,0:26:66.20:0,66,817	0/0:24,0:23:63.20:0,63,793	0/0:17,0:17:51.16:0,51,640	1/1:3,26:29:78.16:789,78,0	0/0:19,0:19:51.16:0,51,640	1/1:1,27:26:75.16:758,75,0	1/1:1,27:28:78.18:796,78,0	0/0:25,0:25:72.19:0,72,867	0/0:33,0:33:99:0,99,1235	0/0:25,0:25:66.20:0,66,813	1/1:2,22:24:63.14:642,63,0	1/1:2,29:31:81.18:826,81,0	1/1:3,19:22:54.12:551,54,0	1/1:1,15:16:45.10:459,45,0	1/1:3,27:29:78.16:788,78,0	1/1:2,23:25:66.15:673,66,0	1/1:1,11:12:30.07:306,30,0	0/0:8,0:8:18.06:0,18,226	0/0:17,0:17:48.14:0,48,586	0/0:21,0:21:57.16:0,57,702	0/0:24,0:24:69.20:0,69,853	1/1:3,21:24:60.13:612,60,0	1/1:1,27:28:75.17:765,75,0	1/1:0,6:6:15.03:153,15,0
chr10	53054476	.	A	AT	11578.81	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-16.843;DP=603;FS=7.686;HRun=3;HaplotypeScore=53.0204;InbreedingCoeff=0.9958;MQ=76.15;MQ0=0;MQRankSum=-4.748;QD=36.41;ReadPosRankSum=-0.342;VQSLOD=4.9123;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,22:23:57.19:793,57,0	1/1:0,7:7:15.05:209,15,0	0/0:8,0:8:20.81:0,21,213	0/0:15,0:15:33.01:0,33,328	0/0:26,0:26:78.24:0,78,934	0/0:32,0:32:91.11:0,91,1055	0/0:15,0:15:39.10:0,39,455	1/1:0,26:26:78.23:1048,78,0	0/0:19,0:19:48.13:0,48,562	1/1:1,33:34:99:1312,99,0	1/1:0,35:35:96.28:1313,96,0	0/0:32,0:32:90.24:0,90,1045	0/0:28,0:28:81.23:0,81,949	0/0:21,0:21:60.18:0,60,719	1/1:2,18:20:51.17:710,51,0	1/1:0,16:16:45.15:619,45,0	1/1:0,18:18:51.17:710,51,0	1/1:1,11:11:24.08:334,24,0	1/1:0,13:14:41.83:528,42,0	1/1:1,33:34:90.30:1252,90,0	1/1:1,12:13:39.13:541,39,0	0/0:22,0:22:57.17:0,57,673	0/0:20,0:20:60.17:0,60,709	0/0:21,0:21:60.17:0,60,706	0/0:26,0:26:75.17:0,75,845	1/1:2,27:29:81.27:1126,81,0	1/1:2,26:28:60.20:834,60,0	1/1:0,9:9:18.06:250,18,0
chr10	53055133	.	GA	G	1306.11	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.556;DP=676;FS=1.773;HRun=9;HaplotypeScore=69.4809;InbreedingCoeff=0.9962;MQ=85.45;MQ0=0;MQRankSum=-2.940;QD=22.52;ReadPosRankSum=3.476;VQSLOD=4.5671;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:69.19:0,69,786	0/0:7,0:8:23.90:0,24,253	0/0:24,0:24:33.12:0,33,356	0/0:23,0:23:30.26:0,30,407	0/0:37,0:38:96.12:0,96,1084	0/0:24,0:24:60.18:0,60,692	0/0:24,0:24:72.20:0,72,820	0/0:29,0:29:63.17:0,63,710	0/0:22,0:22:63.19:0,63,727	0/0:36,0:36:99:0,99,1136	0/0:26,0:26:69.19:0,69,787	0/0:18,0:19:56.98:0,57,627	0/0:23,0:23:60.16:0,60,682	0/0:14,0:14:30.07:0,30,336	0/0:25,0:26:75.04:0,75,835	0/0:25,0:27:77.87:0,78,840	1/1:2,29:31:81.04:741,81,0	1/1:0,27:27:75.04:686,75,0	0/0:29,0:29:78.23:0,78,899	0/0:33,0:34:84.08:0,84,945	0/0:16,0:16:48.13:0,48,545	0/0:23,0:24:60:0,60,664	0/0:23,0:23:60.17:0,60,683	0/0:8,0:8:21.06:0,21,242	0/0:21,0:21:57.15:0,57,646	0/0:31,0:31:87.26:0,87,1004	0/0:30,0:30:81.22:0,81,924	0/0:14,0:14:42.12:0,42,481
chr10	53055238	.	A	AT	7209.66	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=12.395;DP=596;FS=9.335;HRun=1;HaplotypeScore=67.0451;InbreedingCoeff=0.9944;MQ=80.89;MQ0=0;MQRankSum=-1.257;QD=40.05;ReadPosRankSum=1.051;VQSLOD=5.1076;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:42.09:0,42,526	0/0:6,0:6:18.06:0,18,234	0/0:11,0:11:33.10:0,33,409	0/0:18,0:18:44.05:0,44,496	0/0:41,0:41:99:0,123,1564	0/0:37,0:37:99:0,111,1429	0/0:18,0:18:51.17:0,51,662	0/0:36,0:36:99:0,105,1311	0/0:16,0:16:48.13:0,48,594	1/1:0,23:23:69.22:1015,69,0	1/1:0,29:29:78.22:1134,78,0	0/0:20,0:20:54.15:0,54,672	0/0:21,0:21:60.17:0,60,750	0/0:28,0:28:84.26:0,84,1076	0/0:28,0:28:81.26:0,81,1051	0/0:21,0:21:63.19:0,63,803	0/0:25,0:25:75.22:0,75,955	0/0:6,0:6:18.05:0,18,219	1/1:0,17:17:51.15:720,51,0	1/1:2,27:29:81.24:1188,81,0	1/1:0,21:21:57.19:854,57,0	0/0:29,0:29:78.22:0,78,973	0/0:23,0:23:69.22:0,69,895	0/0:5,0:5:15.05:0,15,195	0/0:13,0:13:39.13:0,39,506	1/1:0,23:23:69.18:953,69,0	1/1:2,24:25:63.21:942,63,0	1/1:0,12:12:27.09:404,27,0
chr10	53057783	.	GT	G	464.91	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.925;DP=648;FS=4.869;HRun=4;HaplotypeScore=65.5930;InbreedingCoeff=0.9996;MQ=86.03;MQ0=0;MQRankSum=-0.301;QD=25.83;ReadPosRankSum=-3.367;VQSLOD=1.5204;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,123,1648	0/0:11,0:11:33.10:0,33,443	0/0:23,0:23:62.93:0,63,787	0/0:20,0:20:57.14:0,57,766	0/0:29,0:29:84.27:0,84,1158	0/0:35,0:35:99:0,102,1367	0/0:17,0:17:51.15:0,51,695	1/1:1,17:18:51.05:560,51,0	0/0:27,0:27:75.21:0,75,987	0/0:25,0:25:69.22:0,69,947	0/0:18,0:18:54.15:0,54,706	0/0:15,0:15:45.15:0,45,630	0/0:22,0:22:63.21:0,63,871	0/0:29,0:29:84.27:0,84,1145	0/0:28,0:28:81.23:0,81,1112	0/0:27,0:27:81.27:0,81,1131	0/0:27,0:27:75.21:0,75,1012	0/0:16,0:16:48.16:0,48,672	0/0:26,0:26:78.26:0,78,1079	0/0:24,0:24:66.18:0,66,872	0/0:25,0:25:66.18:0,66,873	0/0:16,0:16:48.15:0,48,654	0/0:15,0:15:42.14:0,42,587	0/0:29,0:29:84.28:0,84,1168	0/0:16,0:16:45.15:0,45,630	0/0:20,0:20:60.20:0,60,840	0/0:33,0:33:99:0,99,1368	0/0:13,0:13:39.13:0,39,545
chr10	53057855	.	A	ATAGGCACC	2931.84	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=0.509;DP=772;FS=1.665;HRun=0;HaplotypeScore=207.4055;InbreedingCoeff=0.9918;MQ=100.63;MQ0=0;MQRankSum=-7.793;QD=91.62;ReadPosRankSum=-3.547;VQSLOD=3.3998;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,126,3609	0/0:11,0:11:33.11:0,33,966	0/0:43,0:43:99:0,111,2897	0/0:41,0:42:99:0,123,3118	0/0:31,0:31:90.30:0,90,2424	0/0:26,0:26:78.27:0,78,2238	0/0:34,0:34:96.32:0,96,2749	1/1:21,10:32:75.25:3027,75,0	0/0:32,0:32:87.23:0,87,2502	0/0:30,0:30:84.28:0,84,2378	0/0:26,0:26:75.23:0,75,2015	0/0:20,0:20:60.21:0,60,1717	0/0:21,0:21:63.22:0,63,1785	0/0:22,0:22:66.20:0,66,1791	0/0:27,0:27:81.28:0,81,2340	0/0:30,0:30:90.31:0,90,2580	0/0:26,0:26:75.71:0,76,2100	0/0:17,0:17:48.16:0,48,1406	0/0:25,0:25:75.23:0,75,2056	0/0:32,0:32:93.31:0,93,2645	0/0:25,0:25:75.26:0,75,2153	0/0:22,0:22:66.23:0,66,1894	0/0:14,0:14:39.12:0,39,1060	0/0:34,0:34:99:0,99,2721	0/0:29,0:29:87.26:0,87,2401	0/0:32,0:32:96.32:0,96,2675	0/0:40,0:40:99:0,120,3350	0/0:6,0:6:18.06:0,18,527
chr10	53059410	.	C	CA	1031.46	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-7.127;DP=729;FS=15.509;HRun=1;HaplotypeScore=88.6510;InbreedingCoeff=0.9304;MQ=88.48;MQ0=0;MQRankSum=-1.123;QD=38.20;ReadPosRankSum=-3.296;VQSLOD=1.2895;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:84.27:0,84,1083	0/0:5,0:5:15.05:0,15,195	0/0:33,0:33:82.14:0,82,1037	0/0:27,0:27:56.38:0,56,753	0/0:27,0:27:81.25:0,81,1035	0/0:26,0:26:75.23:0,75,959	0/0:20,0:20:60.17:0,60,750	1/1:1,25:27:78.24:1126,78,0	0/0:17,0:17:48.16:0,48,622	0/0:32,0:32:95.85:0,96,1165	0/0:10,0:10:27.09:0,27,351	0/0:31,0:31:90.29:0,90,1167	0/0:36,0:36:99:0,105,1323	0/0:33,0:33:99:0,99,1245	0/0:36,0:36:99:0,102,1296	0/0:28,0:28:78.25:0,78,1012	0/0:25,0:25:69.15:0,69,867	0/0:21,0:21:60.18:0,60,763	0/0:29,0:29:84.23:0,84,1048	0/0:14,0:14:42.14:0,42,545	0/0:24,0:24:72.19:0,72,915	0/0:26,0:26:75.24:0,75,973	0/0:16,0:16:45.14:0,45,578	0/0:44,0:44:99:0,117,1459	0/0:20,0:20:60.20:0,60,778	0/0:47,0:47:99:0,132,1700	0/0:39,0:38:99:0,117,1503	0/0:3,0:3:9.03:0,9,117
chr10	53059497	.	GGT	G	438	PASS	AB=0.975;AC=32;AF=0.696;AN=46;BaseQRankSum=3.929;DP=637;FS=6.267;HRun=0;HaplotypeScore=93.9101;InbreedingCoeff=-0.1287;MQ=69.16;MQ0=14;MQRankSum=-0.394;QD=1.01;ReadPosRankSum=1.000;VQSLOD=1.3524;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:0.89:0,1,2	1/1:3,0:5:2.17:9,2,0	./.	0/0:40,0:25:0:0,0,0	1/1:9,0:9:2.80:13,3,0	1/1:25,5:30:3.01:32,3,0	0/1:30,3:33:31.87:84,0,32	0/0:26,0:26:0:0,0,0	1/1:17,1:18:5.85:46,6,0	1/1:23,0:26:5.72:29,6,0	./.	1/1:21,1:22:2.90:32,3,0	0/1:15,0:15:15.08:15,0,79	1/1:20,2:24:11.69:91,12,0	1/1:18,0:22:2.61:12,3,0	1/1:21,0:26:2.84:14,3,0	0/1:34,1:34:13.85:14,0,182	0/1:18,0:18:19.09:26,0,19	./.	0/1:12,0:13:0:0,0,0	./.	0/1:11,0:11:22.36:22,0,60	0/1:20,0:20:13.35:13,0,114	0/1:47,1:48:10.84:11,0,220	1/1:14,1:15:5.71:46,6,0	1/1:22,0:28:2.84:14,3,0	1/1:10,0:13:5.68:28,6,0	./.
chr10	53059855	.	T	TG	1937.49	PASS	AB=0.880;AC=31;AF=0.554;AN=56;BaseQRankSum=-3.978;DP=273;FS=10.664;HRun=9;HaplotypeScore=46.7463;InbreedingCoeff=0.6767;MQ=87.12;MQ0=0;MQRankSum=-4.309;QD=12.50;ReadPosRankSum=-2.557;VQSLOD=1.2349;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,12:15:21.06:232,21,0	1/1:2,3:5:6.90:68,7,0	0/1:15,1:15:6.16:6,0,107	0/0:11,0:10:16.29:0,16,129	0/0:8,0:8:20.97:0,21,179	0/0:5,0:5:11.97:0,12,101	0/0:10,0:10:23.98:0,24,206	1/1:13,0:14:28.41:143,28,0	0/0:8,0:8:13.23:0,13,127	1/1:4,4:8:12.03:133,12,0	1/1:1,4:5:12.03:131,12,0	0/0:9,0:9:17.98:0,18,156	0/1:10,0:10:13.23:13,0,66	0/0:15,0:15:7.20:0,7,187	1/1:1,7:8:12.03:133,12,0	1/1:4,2:6:2.63:33,3,0	1/1:6,12:18:21.53:233,22,0	1/1:2,4:6:6.02:67,6,0	1/1:2,5:7:15.04:166,15,0	1/1:1,5:6:9.02:100,9,0	1/1:2,12:14:36.10:398,36,0	0/0:8,0:8:14.99:0,15,130	0/0:9,0:9:17.99:0,18,156	0/0:23,0:23:41.93:0,42,364	0/0:12,0:12:32.99:0,33,286	0/1:4,3:7:16.98:57,0,17	1/1:0,8:8:18.05:199,18,0	1/1:1,1:2:3.01:33,3,0
chr10	53059861	.	G	GGGGGA	956.21	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-3.233;DP=278;FS=3.528;HRun=0;HaplotypeScore=69.7719;InbreedingCoeff=0.6209;MQ=88.32;MQ0=1;MQRankSum=-2.455;QD=56.25;ReadPosRankSum=-3.247;VQSLOD=2.7942;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:26.59:0,27,178	0/0:6,0:6:7.93:0,8,53	0/0:17,0:16:26:0,26,283	0/0:10,0:9:22.77:0,23,343	0/0:9,0:9:27.07:0,27,447	0/0:6,0:6:18.04:0,18,274	0/0:10,0:10:30.09:0,30,513	1/1:2,12:17:48.10:1051,48,0	0/0:8,0:8:19.22:0,19,332	0/0:6,0:6:14.38:0,14,80	0/0:6,0:6:14.79:0,15,101	0/0:11,0:11:29.66:0,30,434	0/0:10,0:10:15.25:0,15,245	0/0:15,0:15:19.26:0,19,537	0/0:8,0:8:14.77:0,15,99	0/0:6,0:6:7.96:0,8,47	0/0:14,0:14:20.06:0,20,126	0/0:5,0:5:5.88:0,6,36	0/0:9,0:9:20.56:0,21,132	0/0:5,0:5:11.83:0,12,80	0/0:15,0:14:38.28:0,38,239	0/0:8,0:8:21.04:0,21,336	0/0:10,0:10:18.06:0,18,347	0/0:19,0:19:54.02:0,54,870	0/0:14,0:14:36.11:0,36,661	0/0:6,0:6:17.86:0,18,176	0/0:10,0:10:20.38:0,20,119	0/0:2,0:2:2.94:0,3,18
chr10	53060751	.	GACACACACACACACACACACACAC	G	2235.01	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=5.761;DP=643;FS=7.615;HRun=0;HaplotypeScore=323.2965;InbreedingCoeff=0.7959;MQ=66.00;MQ0=6;MQRankSum=-5.514;QD=25.69;ReadPosRankSum=-1.546;VQSLOD=0.9655;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:25,14:39:6.02:277,6,0	1/1:3,3:6:3.01:185,3,0	0/0:33,0:21:12.93:0,13,360	0/0:31,0:21:3.01:0,3,169	0/0:23,0:22:15.99:0,16,1491	0/0:14,0:25:9.03:0,9,798	0/0:30,0:30:27.41:0,27,1725	0/0:22,0:22:30.10:0,30,1704	0/0:7,0:11:15.05:0,15,769	0/0:20,0:20:42.14:0,42,2784	0/0:12,0:13:18.06:0,18,1099	0/0:23,0:23:48.16:0,48,4018	0/0:21,0:21:45.63:0,46,3896	0/0:22,0:22:18.06:0,18,1122	1/1:12,13:28:24.08:1350,24,0	1/1:7,7:14:8.57:561,9,0	0/0:29,0:34:78.27:0,78,7263	0/0:22,0:24:51.18:0,51,4475	0/0:17,0:17:23.75:0,24,1124	0/0:14,0:16:30.10:0,30,2087	0/0:32,0:44:63.22:0,63,4317	0/0:18,0:18:30.10:0,30,2548	0/0:18,0:18:42.12:0,42,4037	0/0:47,0:47:99:0,100,8708	0/0:15,0:21:12.72:0,13,896	0/0:15,0:17:27.09:0,27,2077	0/0:10,0:16:26.46:0,26,2011	0/0:1,0:7:9.03:0,9,743
chr10	53060942	.	C	CA	2351.22	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-8.689;DP=685;FS=3.597;HRun=6;HaplotypeScore=66.4119;InbreedingCoeff=0.9970;MQ=79.68;MQ0=1;MQRankSum=-1.821;QD=27.99;ReadPosRankSum=1.287;VQSLOD=4.4771;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,31:35:81.26:1019,81,0	1/1:2,9:11:24.08:302,24,0	0/0:21,0:21:36.05:0,36,354	0/0:21,0:20:34.04:0,34,294	0/0:22,0:22:54.10:0,54,544	0/0:21,0:21:57.13:0,57,581	0/0:22,0:22:57.09:0,57,571	0/0:26,0:26:63.12:0,63,633	0/0:17,0:17:48.06:0,48,472	0/0:25,0:25:66.14:0,66,668	0/0:16,0:16:39.06:0,39,388	0/0:21,0:21:60.13:0,60,612	0/0:37,0:37:99:0,108,1094	0/0:36,0:36:99:0,99,1003	1/1:3,17:20:51.16:641,51,0	1/1:2,16:18:45.11:549,45,0	0/0:43,0:43:99:0,111,1123	0/0:21,0:21:57.13:0,57,582	0/0:26,0:26:63.13:0,63,637	0/0:30,0:30:81.15:0,81,818	0/0:50,0:50:99:0,141,1424	0/0:17,0:17:48.11:0,48,489	0/0:19,0:18:36.07:0,36,367	0/0:32,0:32:87.17:0,87,879	0/0:18,0:18:39.08:0,39,398	0/0:31,0:31:81.17:0,81,826	0/0:22,0:21:63.14:0,63,642	0/0:7,0:7:18.04:0,18,184
chr10	53061089	.	TTTGG	T	7405.07	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=15.624;DP=707;FS=3.603;HRun=0;HaplotypeScore=116.6860;InbreedingCoeff=0.9763;MQ=64.67;MQ0=3;MQRankSum=1.289;QD=36.30;ReadPosRankSum=3.575;VQSLOD=5.1726;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:69.24:0,69,1668	0/0:12,0:12:30.10:0,30,729	0/0:21,0:15:30.09:0,30,584	0/0:24,0:19:4.33:0,4,468	0/0:30,0:30:78.27:0,78,1872	0/0:21,0:21:48.16:0,48,1120	0/0:25,0:25:39.13:0,39,889	0/0:31,0:31:69.23:0,69,1553	0/0:14,0:14:33.11:0,33,798	1/1:8,19:27:57.19:923,57,0	1/1:4,21:25:63.08:920,63,0	0/0:18,0:18:45.15:0,45,1053	0/0:31,0:31:78.25:0,78,1791	0/0:39,0:39:96.32:0,96,2238	0/0:32,0:32:72.23:0,72,1656	0/0:21,0:21:45.15:0,45,1052	0/0:31,0:31:84.26:0,84,1936	0/0:23,0:23:51.17:0,51,1096	1/1:10,12:22:36.11:559,36,0	1/1:4,26:30:78.27:1277,78,0	1/1:2,14:16:36.12:589,36,0	0/0:17,0:17:33.11:0,33,799	0/0:25,0:25:69.24:0,69,1612	0/0:24,0:24:51.18:0,51,1213	0/0:35,0:35:87.30:0,87,2104	1/1:3,28:31:84.29:1370,84,0	1/1:7,27:34:75.08:1227,75,0	1/1:4,15:19:33.11:540,33,0
chr10	53061576	.	A	AG	15313.09	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=19.950;DP=719;FS=2.684;HRun=2;HaplotypeScore=122.5102;InbreedingCoeff=0.9999;MQ=67.79;MQ0=2;MQRankSum=-3.203;QD=43.88;ReadPosRankSum=3.310;VQSLOD=4.0912;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,39:40:99:1867,117,0	1/1:1,12:13:29.92:479,30,0	0/0:23,0:22:63.13:0,63,780	0/0:24,0:22:61.45:0,61,835	0/0:31,0:31:90.75:0,91,1225	0/0:35,0:35:99:0,102,1380	0/0:25,0:25:75.25:0,75,1046	0/0:24,0:24:72.23:0,72,988	0/0:26,0:26:78.24:0,78,1054	1/1:0,29:29:87.28:1365,87,0	1/1:1,20:21:57.19:908,57,0	0/0:22,0:22:66.20:0,66,891	0/0:30,0:30:87.29:0,87,1213	0/0:22,0:22:66.22:0,66,920	1/1:1,29:30:75.26:1199,75,0	1/1:0,23:23:60.20:959,60,0	1/1:1,23:24:44.43:1074,44,0	1/1:0,15:15:42.14:667,42,0	1/1:0,21:21:63.21:1002,63,0	1/1:0,29:29:78.26:1235,78,0	1/1:0,17:17:39.13:623,39,0	0/0:25,0:25:75.24:0,75,1024	0/0:24,0:24:72.20:0,72,964	0/0:28,0:28:78.22:0,78,1065	0/0:31,0:31:90.27:0,90,1234	1/1:1,32:33:96.33:1530,96,0	1/1:1,40:42:99:1856,117,0	1/1:1,11:12:36.09:548,36,0
chr10	53063427	.	T	TA	1146.79	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-6.035;DP=622;FS=6.444;HRun=7;HaplotypeScore=61.1988;InbreedingCoeff=0.9983;MQ=71.07;MQ0=0;MQRankSum=-2.770;QD=29.40;ReadPosRankSum=1.920;VQSLOD=4.3480;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:28:65.45:0,65,611	0/0:11,0:11:33.05:0,33,319	0/0:21,0:20:44.85:0,45,408	0/0:12,0:10:24.04:0,24,231	0/0:31,0:31:84.10:0,84,799	0/0:22,0:22:57.09:0,57,550	0/0:14,0:14:36.03:0,36,341	0/0:37,0:37:93.12:0,93,888	0/0:17,0:17:42.06:0,42,406	0/0:24,0:24:63.09:0,63,607	0/0:28,0:28:69.10:0,69,666	0/0:23,0:23:66.11:0,66,637	0/0:29,0:29:84.13:0,84,811	0/0:24,0:24:63.10:0,63,608	0/0:26,0:26:75.12:0,75,724	0/0:27,0:27:69.11:0,69,666	1/1:0,20:20:51.16:616,51,0	1/1:0,19:19:54.17:652,54,0	0/0:23,0:23:66.10:0,66,637	0/0:25,0:25:66.11:0,66,637	0/0:12,0:12:30.04:0,30,290	0/0:16,0:16:36.05:0,36,347	0/0:26,0:26:78.11:0,78,747	0/0:14,0:14:36.05:0,36,348	0/0:24,0:24:54.08:0,54,521	0/0:25,0:25:39.66:0,40,582	0/0:25,0:25:66.10:0,66,637	0/0:19,0:19:48.07:0,48,464
chr10	53065896	.	ATAG	A	986.35	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.967;DP=642;FS=1.720;HRun=0;HaplotypeScore=84.7613;InbreedingCoeff=0.9768;MQ=72.86;MQ0=0;MQRankSum=-0.730;QD=41.10;ReadPosRankSum=-4.730;VQSLOD=3.1865;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:84.29:0,84,1877	0/0:11,0:11:33.11:0,33,745	0/0:18,0:18:48.16:0,48,1032	0/0:10,0:10:15.05:0,15,321	0/0:34,0:34:99:0,102,2255	0/0:38,0:37:99:0,108,2313	0/0:10,0:10:30.09:0,30,634	1/1:1,23:24:69.21:1081,69,0	0/0:20,0:20:57.20:0,57,1264	0/0:28,0:28:84.28:0,84,1799	0/0:25,0:25:72.23:0,72,1561	0/0:14,0:14:39.13:0,39,881	0/0:27,0:27:81.28:0,81,1805	0/0:26,0:26:75.26:0,75,1637	0/0:32,0:32:90.29:0,90,1908	0/0:25,0:25:75.24:0,75,1650	0/0:21,0:21:63.22:0,63,1378	0/0:22,0:22:63.22:0,63,1402	0/0:14,0:14:36.12:0,36,811	0/0:32,0:32:93.28:0,93,1951	0/0:7,0:7:21.07:0,21,474	0/0:31,0:31:90.30:0,90,1967	0/0:37,0:37:99:0,105,2372	0/0:10,0:10:27.09:0,27,610	0/0:30,0:30:87.29:0,87,1866	0/0:34,0:34:99:0,102,2304	0/0:26,0:25:72.21:0,72,1520	0/0:8,0:8:24.08:0,24,516
chr10	53068437	.	T	TG	7958.66	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-3.868;DP=716;FS=2.590;HRun=5;HaplotypeScore=83.2265;InbreedingCoeff=0.9986;MQ=93.49;MQ0=0;MQRankSum=-8.354;QD=34.01;ReadPosRankSum=1.960;VQSLOD=5.2314;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:72.16:0,72,764	0/0:14,0:14:36.09:0,36,387	0/0:33,0:33:51.38:0,51,893	0/0:31,0:31:78.13:0,78,809	0/0:31,0:31:90.23:0,90,967	0/0:33,0:33:90.21:0,90,960	0/0:13,0:13:27.05:0,27,281	0/0:32,0:32:78.18:0,78,825	0/0:19,0:19:54.12:0,54,572	1/1:6,26:32:84.27:1086,84,0	1/1:1,22:23:63.20:827,63,0	0/0:24,0:24:63.15:0,63,677	0/0:33,0:33:93.21:0,93,990	0/0:20,0:20:54.12:0,54,571	0/0:45,0:45:99:0,126,1342	0/0:27,0:27:78.20:0,78,838	1/1:0,15:15:45.15:592,45,0	1/1:2,14:16:36.12:474,36,0	1/1:2,21:23:63.19:813,63,0	1/1:1,28:29:84.23:1080,84,0	1/1:1,18:19:45.15:592,45,0	0/0:32,0:32:84.21:0,84,902	0/0:25,0:25:66.15:0,66,700	0/0:24,0:24:54.08:0,54,560	0/0:21,0:21:60.15:0,60,645	1/1:0,25:25:75.21:955,75,0	1/1:6,38:44:99:1302,99,0	1/1:2,6:8:18.06:237,18,0
chr10	53068611	.	A	AC	9039.88	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=16.219;DP=632;FS=8.342;HRun=0;HaplotypeScore=79.0957;InbreedingCoeff=0.9942;MQ=83.45;MQ0=0;MQRankSum=-2.711;QD=41.47;ReadPosRankSum=1.107;VQSLOD=5.2320;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:19.64:0,20,269	0/0:4,0:4:11.81:0,12,76	0/0:20,0:20:60.19:0,60,822	0/0:17,0:17:34.26:0,34,480	0/0:32,0:32:96.31:0,96,1324	0/0:31,0:31:87.28:0,87,1198	0/0:18,0:18:54.16:0,54,736	0/0:36,0:36:99:0,99,1371	0/0:12,0:12:36.12:0,36,503	1/1:1,22:23:65.98:934,66,0	1/1:0,28:28:78.18:1135,78,0	0/0:20,0:20:60.19:0,60,822	0/0:17,0:17:48.16:0,48,671	0/0:23,0:23:69.23:0,69,957	0/0:32,0:32:69.79:0,70,587	0/0:21,0:21:61.17:0,61,396	1/1:0,22:22:60.20:891,60,0	1/1:1,16:18:48.16:712,48,0	1/1:0,17:17:51.13:718,51,0	1/1:0,35:35:99:1530,105,0	1/1:0,14:14:42.14:626,42,0	0/0:26,0:26:78.26:0,78,1090	0/0:35,0:35:99:0,105,1434	0/0:27,0:27:78.25:0,78,1073	0/0:27,0:27:78.25:0,78,1075	1/1:0,18:18:54.15:755,54,0	1/1:2,31:33:87.16:1295,87,0	1/1:0,10:10:30.10:444,30,0
chr10	53069447	.	C	CAG	189.15	PASS	AB=0.962;AC=5;AF=0.089;AN=56;BaseQRankSum=7.029;DP=925;FS=3.480;HRun=0;HaplotypeScore=169.3045;InbreedingCoeff=0.1004;MQ=43.78;MQ0=119;MQRankSum=-1.120;QD=1.44;ReadPosRankSum=-1.710;VQSLOD=2.4147;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:50,2:43:49.25:0,49,628	0/0:9,0:7:15.05:0,15,203	0/0:42,0:13:24.04:0,24,288	0/1:47,0:18:62.34:62,0,251	0/0:31,0:28:54.04:0,54,689	0/0:49,0:22:22.27:0,22,429	0/0:43,2:45:14.14:0,14,1186	0/0:20,0:13:27.05:0,27,342	0/0:31,0:28:72.70:0,73,960	0/0:51,0:29:13.76:0,14,189	1/1:20,0:16:1.11:22,1,0	0/0:32,2:31:12.61:0,13,800	0/0:42,0:36:83.76:0,84,1103	0/0:28,0:23:52.05:0,52,688	0/0:34,1:28:67.95:0,68,818	0/0:39,2:32:57.74:0,58,742	0/0:20,0:15:15.90:0,16,102	0/1:18,1:20:16.87:119,0,17	0/0:32,0:15:6.79:0,7,39	0/0:22,0:17:2.17:0,2,16	0/0:33,2:22:1.46:0,1,39	0/0:26,0:22:48.07:0,48,591	0/0:18,0:15:36.07:0,36,465	0/0:54,1:52:99:0,117,1539	0/0:30,0:26:51.93:0,52,635	0/1:41,1:34:94.11:94,0,103	0/0:30,0:25:9.22:0,9,62	0/0:7,0:5:3.64:0,4,14
chr10	53069451	.	GAGGC	G	72.64	PASS	AB=0.992;AC=6;AF=0.107;AN=56;BaseQRankSum=5.560;DP=930;FS=1.682;HRun=0;HaplotypeScore=186.4978;InbreedingCoeff=0.1115;MQ=43.51;MQ0=122;MQRankSum=-6.058;QD=0.74;ReadPosRankSum=-3.650;VQSLOD=1.5415;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,1:37:52.90:0,53,839	0/0:9,0:7:7.19:0,7,292	0/0:41,0:11:17.45:0,17,452	0/0:52,1:19:27.87:0,28,482	0/0:30,0:27:54.14:0,54,1198	0/0:47,1:21:42.04:0,42,876	0/0:50,0:48:99:0,124,2620	0/0:20,0:12:33.08:0,33,632	0/0:34,0:31:78.26:0,78,1877	0/0:51,0:29:1.97:0,2,384	1/1:14,1:12:1.12:22,1,0	0/0:38,0:33:82.37:0,82,1890	0/0:43,0:36:93.29:0,93,2273	0/0:29,0:24:58.08:0,58,1281	0/0:32,1:27:30.02:0,30,1101	0/0:36,0:28:59.70:0,60,1111	0/0:19,1:15:19.67:0,20,213	0/1:21,0:20:78.16:78,0,220	0/1:28,1:12:70.22:70,0,143	0/1:24,0:19:1.98:2,0,121	0/0:34,1:23:15.35:0,15,144	0/0:27,0:23:48.07:0,48,1025	0/0:21,0:18:41.62:0,42,942	0/0:61,0:55:99:0,101,3124	0/0:29,0:24:54.93:0,55,1086	0/0:42,0:33:21.33:0,21,427	0/0:30,0:25:32.82:0,33,389	0/1:8,0:5:6.57:7,0,83
chr10	53069453	.	GGC	G	709.64	PASS	AB=0.880;AC=9;AF=0.161;AN=56;BaseQRankSum=8.259;DP=906;FS=10.544;HRun=0;HaplotypeScore=161.2213;InbreedingCoeff=-0.0134;MQ=45.20;MQ0=121;MQRankSum=-4.862;QD=3.35;ReadPosRankSum=-2.267;VQSLOD=1.3317;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:34:16.64:0,17,821	0/0:9,0:7:7.19:0,7,278	0/0:38,2:11:16.83:0,17,392	0/0:54,0:20:28.33:0,28,466	0/0:27,0:24:54.07:0,54,1012	0/0:47,0:20:42.03:0,42,703	0/0:49,0:47:99:0,127,2309	0/0:19,0:11:33.08:0,33,612	0/0:33,2:31:29.76:0,30,1378	0/1:41,7:26:99:242,0,106	1/1:15,1:12:1.08:22,1,0	0/0:38,0:34:9.43:0,9,1437	0/0:43,0:36:62.36:0,62,1716	0/0:29,0:24:58.08:0,58,1063	0/0:34,0:27:50.67:0,51,1152	0/0:34,2:27:39.54:0,40,1054	0/0:18,0:12:19.08:0,19,134	0/1:18,3:20:99:117,0,154	0/1:25,1:10:46.48:144,0,46	0/1:20,4:19:7.14:7,0,15	0/0:37,0:21:3.67:0,4,42	0/0:26,0:22:48.07:0,48,815	0/0:21,0:18:42.09:0,42,758	0/0:59,1:54:99:0,119,2584	0/0:29,0:24:55.88:0,56,955	0/1:35,5:31:99:226,0,155	0/1:26,3:24:53.94:54,0,58	0/1:6,2:5:9.14:31,0,9
chr10	53069463	.	C	CAG	2926.65	PASS	AB=0.899;AC=14;AF=0.250;AN=56;BaseQRankSum=7.394;DP=865;FS=16.539;HRun=0;HaplotypeScore=159.1574;InbreedingCoeff=0.2470;MQ=44.98;MQ0=101;MQRankSum=-3.395;QD=10.34;ReadPosRankSum=1.293;VQSLOD=2.6257;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:23,17:32:33.51:619,34,0	0/1:7,4:8:24.33:183,0,24	0/0:47,0:12:29.21:0,29,308	0/0:63,0:20:5.06:0,5,183	0/0:21,0:17:30.10:0,30,379	0/0:43,0:19:24.08:0,24,303	0/0:46,0:47:93.34:0,93,1119	0/1:11,8:12:13.81:296,0,14	0/0:36,0:33:66.24:0,66,835	0/0:45,0:27:13.65:0,14,211	0/1:12,0:9:0.03:1,0,0	0/0:39,0:36:72.09:0,72,879	0/0:41,0:34:75.21:0,75,925	0/0:25,0:20:36.10:0,36,440	1/1:11,19:27:55.43:888,55,0	1/1:17,17:28:10.15:782,10,0	0/1:18,1:14:29.18:132,0,29	0/1:17,2:19:55.21:55,0,98	0/0:20,0:9:9.86:0,10,86	0/1:22,0:17:44.22:51,0,44	0/1:31,2:20:28.88:29,0,67	0/0:21,0:20:33.10:0,33,416	0/0:16,0:15:30.10:0,30,378	0/0:64,0:59:99:0,135,1675	0/0:19,0:15:27.09:0,27,341	0/1:30,1:25:56.43:56,0,215	0/0:24,0:21:5.33:0,5,134	0/0:6,0:3:5.99:0,6,49
chr10	53069467	.	G	GGC	103.86	PASS	AB=0.989;AC=9;AF=0.161;AN=56;BaseQRankSum=8.333;DP=825;FS=16.890;HRun=0;HaplotypeScore=177.6466;InbreedingCoeff=0.0671;MQ=45.82;MQ0=76;MQRankSum=-7.600;QD=0.52;ReadPosRankSum=1.537;VQSLOD=1.9607;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:35,1:29:30.50:59,0,30	0/0:11,0:9:9.37:0,9,98	0/0:52,0:13:29.04:0,29,351	0/0:63,0:21:23.64:0,24,391	0/0:17,0:15:36.12:0,36,581	0/0:31,0:18:33.11:0,33,517	0/0:49,0:46:99:0,115,1723	0/0:23,0:13:2.83:0,3,262	0/0:36,0:32:81.23:0,81,1245	0/0:36,0:27:6.01:0,6,455	0/1:9,0:8:0.03:1,0,0	0/0:40,0:37:93.16:0,93,1466	0/0:38,0:34:89.78:0,90,1392	0/0:26,0:21:45.15:0,45,725	1/1:33,0:28:2.28:80,2,0	0/1:34,0:28:55.68:56,0,96	0/1:19,0:14:8.57:9,0,156	0/1:16,1:17:1.08:1,0,161	0/0:20,0:10:2.60:0,3,151	0/1:20,0:17:0.26:0,0,165	0/0:33,1:17:5.85:0,6,117	0/0:21,0:21:42.14:0,42,667	0/0:15,0:14:33.11:0,33,536	0/0:64,1:60:99:0,144,2340	0/0:16,1:14:30.10:0,30,484	0/1:30,0:25:11.90:12,0,532	0/0:24,0:21:19.02:0,19,484	0/0:4,0:2:6.02:0,6,98
chr10	53069469	.	G	GGC	184.93	PASS	AB=0.977;AC=8;AF=0.143;AN=56;BaseQRankSum=7.334;DP=795;FS=14.772;HRun=0;HaplotypeScore=175.2082;InbreedingCoeff=0.1569;MQ=46.58;MQ0=56;MQRankSum=-7.453;QD=1.19;ReadPosRankSum=-1.761;VQSLOD=1.7501;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:35,0:30:34.22:41,0,34	0/1:12,0:9:1.70:2,0,96	0/0:55,0:14:31.26:0,31,422	0/0:65,0:22:15.95:0,16,280	0/0:17,0:15:36.11:0,36,561	0/0:20,0:14:30.06:0,30,455	0/0:45,1:43:99:0,102,1660	0/0:24,0:15:8.24:0,8,336	0/0:34,2:32:6.59:0,7,1053	0/0:35,0:26:42.54:0,43,627	0/1:10,0:9:0.04:1,0,0	0/0:42,0:39:93.78:0,94,1495	0/0:33,0:33:87.30:0,87,1399	0/0:22,1:20:48.16:0,48,765	1/1:30,0:25:9.92:103,10,0	0/1:30,2:28:51.55:127,0,52	0/0:18,1:14:1.30:0,1,214	0/1:16,1:16:7.09:7,0,140	0/1:18,0:10:26.40:26,0,226	0/0:19,0:16:7.42:0,7,192	0/0:30,0:15:5.80:0,6,98	0/0:20,0:20:39.13:0,39,630	0/0:16,0:15:34.42:0,34,557	0/0:65,1:60:99:0,147,2359	0/0:17,0:14:25.83:0,26,438	0/0:27,0:23:40.99:0,41,603	0/0:22,1:21:39.03:0,39,510	0/0:4,0:2:6.02:0,6,98
chr10	53069475	.	GGC	G	421.61	PASS	AB=0.790;AC=9;AF=0.161;AN=56;BaseQRankSum=7.553;DP=706;FS=25.602;HRun=0;HaplotypeScore=157.4323;InbreedingCoeff=-0.1060;MQ=47.45;MQ0=34;MQRankSum=-6.526;QD=2.93;ReadPosRankSum=2.657;VQSLOD=1.0338;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:25:41.26:0,41,421	0/0:11,0:9:25.57:0,26,302	0/0:56,0:16:31.30:0,31,571	0/0:66,1:23:29.46:0,29,351	0/0:17,0:16:33.11:0,33,660	0/0:21,0:15:30.10:0,30,595	0/0:42,0:39:99:0,104,1906	0/0:21,0:14:29.40:0,29,582	0/0:34,0:30:80.35:0,80,1469	0/1:13,7:22:99:182,0,112	0/1:5,1:9:0.16:0,0,0	0/0:37,0:35:98.86:0,99,1763	0/0:33,0:32:87.30:0,87,1638	0/0:20,0:18:48.14:0,48,874	0/0:28,0:22:47.12:0,47,535	0/0:29,0:25:48.49:0,48,587	0/1:12,2:12:55.81:56,0,92	0/1:14,1:14:19.63:20,0,79	0/1:8,2:8:51.70:52,0,88	0/1:6,3:13:47.64:58,0,48	0/1:17,1:12:8.56:9,0,41	0/0:20,0:20:45.15:0,45,864	0/0:15,0:15:39.10:0,39,742	0/0:64,0:58:99:0,147,2819	0/0:14,0:13:27.09:0,27,548	0/1:12,5:17:99:130,0,221	0/1:13,2:14:48.99:49,0,142	0/0:4,0:3:5.88:0,6,49
chr10	53069483	.	G	GGC	69.70	PASS	AB=0.967;AC=6;AF=0.107;AN=56;BaseQRankSum=4.283;DP=691;FS=37.257;HRun=0;HaplotypeScore=169.3120;InbreedingCoeff=0.2808;MQ=49.64;MQ0=26;MQRankSum=-4.544;QD=0.81;ReadPosRankSum=-1.114;VQSLOD=0.8717;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:23:39.29:0,39,510	0/0:10,1:10:14.64:0,15,284	0/0:51,0:16:26.57:0,27,367	0/0:75,0:26:52.93:0,53,551	0/0:16,0:15:36.12:0,36,583	0/0:18,0:15:33.11:0,33,537	0/0:42,2:41:99:0,99,1691	0/0:21,0:16:45.62:0,46,727	0/1:32,3:31:29.83:30,0,1088	0/0:22,0:21:39.11:0,39,520	0/1:8,0:8:0.04:1,0,0	0/0:36,1:35:96.14:0,96,1493	0/0:32,0:31:90.28:0,90,1422	0/0:17,1:16:45.10:0,45,697	0/0:26,1:21:27.84:0,28,660	0/1:24,0:21:3.72:4,0,712	0/0:16,0:13:13.83:0,14,294	0/1:17,1:15:99:124,0,165	0/0:7,0:7:15.04:0,15,193	0/0:15,0:15:14.53:0,15,183	0/0:20,0:13:9.76:0,10,147	0/0:20,0:20:48.12:0,48,739	0/0:14,0:14:30.10:0,30,487	0/0:63,1:59:99:0,141,2265	0/0:14,0:13:30.10:0,30,473	0/0:21,0:19:50.49:0,50,639	0/0:14,0:13:23.75:0,24,282	1/1:0,0:1:2.84:14,3,0
chr10	53069489	.	GGC	G	1592.34	PASS	AB=0.881;AC=20;AF=0.357;AN=56;BaseQRankSum=10.241;DP=651;FS=45.551;HRun=0;HaplotypeScore=144.6083;InbreedingCoeff=0.3239;MQ=48.65;MQ0=24;MQRankSum=-8.804;QD=5.79;ReadPosRankSum=-0.123;VQSLOD=1.1939;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,1:21:38.19:0,38,363	0/1:9,1:8:27.03:27,0,137	0/1:42,2:12:22.03:22,0,138	0/1:68,2:25:1.22:1,0,289	0/0:18,0:17:39.12:0,39,718	0/0:21,0:17:39.12:0,39,709	0/0:40,1:38:98.90:0,99,1646	0/0:20,0:14:42.14:0,42,777	0/0:37,0:33:72.16:0,72,1335	1/1:4,19:21:37.62:434,38,0	1/1:3,4:7:0.73:2,1,0	0/0:37,0:35:96.79:0,97,1798	0/0:29,0:29:87.30:0,87,1602	0/0:18,0:17:48.16:0,48,930	0/0:21,2:17:2.47:0,2,384	0/1:25,0:21:62.63:63,0,476	0/1:11,2:11:31.50:116,0,32	0/1:11,2:10:66.88:67,0,121	0/1:2,5:7:11.02:124,0,11	1/1:3,10:13:16.93:140,17,0	0/1:15,2:10:4.75:18,0,5	0/0:19,0:19:48.07:0,48,840	0/0:13,0:13:33.08:0,33,629	0/0:62,1:59:99:0,141,2675	0/0:14,0:13:27.06:0,27,480	1/1:7,12:18:12.39:505,12,0	1/1:5,7:11:20.96:244,21,0	1/1:1,0:1:0.47:1,0,0
chr10	53069491	.	C	CAGAGAG	3508.14	PASS	AB=1.000;AC=25;AF=0.446;AN=56;BaseQRankSum=11.121;DP=656;FS=49.768;HRun=0;HaplotypeScore=180.9411;InbreedingCoeff=0.5607;MQ=49.24;MQ0=26;MQRankSum=-10.974;QD=14.56;ReadPosRankSum=-1.250;VQSLOD=1.0683;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,12:25:30.08:793,30,0	1/1:8,1:8:11.58:177,12,0	0/0:44,0:12:2.25:0,2,123	0/0:69,0:23:1.99:0,2,79	0/0:17,0:16:33.11:0,33,696	0/1:20,0:17:9.67:10,0,559	0/0:36,0:35:73.05:0,73,1369	0/0:22,0:17:33.10:0,33,658	0/0:35,0:31:46.33:0,46,1133	1/1:26,0:24:24.84:180,25,0	0/1:7,0:7:0.28:0,0,0	0/0:34,0:34:84.28:0,84,1664	0/0:30,0:30:63.17:0,63,1197	0/0:19,0:18:42.14:0,42,831	1/1:16,6:17:29.82:775,30,0	1/1:20,4:20:36.10:808,36,0	1/1:12,0:11:3.11:84,3,0	0/1:14,0:11:34.10:43,0,34	1/1:12,0:10:1.46:130,1,0	0/1:14,0:14:12.65:63,0,13	0/1:20,0:12:11.01:15,0,11	0/0:19,0:19:30.10:0,30,644	0/0:13,0:13:27.09:0,27,569	0/0:60,0:56:99:0,114,2351	0/0:12,0:11:21.06:0,21,379	1/1:19,0:18:25.09:284,25,0	1/1:12,0:11:15.53:136,16,0	1/1:1,0:1:2.68:11,3,0
chr10	53069503	.	GAGGC	G	473.96	PASS	AB=0.988;AC=17;AF=0.304;AN=56;BaseQRankSum=8.812;DP=697;FS=19.220;HRun=0;HaplotypeScore=179.4311;InbreedingCoeff=-0.2055;MQ=49.40;MQ0=22;MQRankSum=-5.201;QD=1.34;ReadPosRankSum=-4.240;VQSLOD=0.2712;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:25:99:183,0,148	0/1:11,0:9:27.31:27,0,153	0/1:38,0:12:18.47:18,0,169	0/1:69,0:24:12.48:12,0,203	0/0:17,0:16:32.70:0,33,902	0/1:23,0:19:3.63:4,0,847	0/0:43,0:40:99:0,109,2321	0/0:22,0:21:53.92:0,54,1003	0/0:31,0:29:69.07:0,69,1669	0/1:31,0:27:6.25:6,0,415	1/1:10,0:9:0.47:2,0,0	0/0:40,0:38:99:0,99,2492	0/0:29,0:29:75.24:0,75,1862	0/0:25,0:22:60.20:0,60,1339	0/1:20,2:20:99:177,0,192	0/1:23,2:21:86.02:86,0,309	0/1:19,0:15:30.85:31,0,98	0/1:19,0:13:6.32:6,0,218	0/0:16,0:12:14.92:0,15,387	0/1:17,0:17:18.83:19,0,73	0/0:22,0:16:3.22:0,3,104	0/0:14,0:14:36.12:0,36,887	0/0:15,0:15:38.72:0,39,959	0/0:58,0:53:99:0,120,3114	0/0:11,0:10:21.06:0,21,492	0/1:21,0:20:11.04:11,0,607	0/1:18,0:14:32.95:33,0,135	1/1:2,0:2:1.55:4,2,0
chr10	53069505	.	GGC	G	440.95	PASS	AB=0.933;AC=16;AF=0.286;AN=56;BaseQRankSum=9.098;DP=698;FS=25.625;HRun=0;HaplotypeScore=162.8023;InbreedingCoeff=-0.1703;MQ=48.44;MQ0=23;MQRankSum=-5.675;QD=1.31;ReadPosRankSum=-3.445;VQSLOD=0.3627;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:26,1:24:87.27:87,0,139	0/1:10,1:9:18.32:18,0,132	0/1:39,1:14:29.52:30,0,213	0/1:66,1:20:31.77:32,0,217	0/0:16,0:16:33.08:0,33,668	0/1:25,0:21:0.63:1,0,678	0/0:42,0:39:99:0,109,1850	0/0:22,0:21:54.15:0,54,1001	0/0:31,0:30:72.08:0,72,1325	0/1:28,2:26:52.67:53,0,344	1/1:9,1:9:0.89:2,1,0	0/0:40,0:38:99:0,99,1880	0/0:28,0:28:75.24:0,75,1388	0/0:26,0:23:63.20:0,63,1105	0/1:23,0:20:99:144,0,209	0/1:21,1:20:62.78:63,0,258	0/1:12,6:15:59.62:60,0,85	0/0:17,3:14:6.12:0,6,264	0/0:15,0:10:24.01:0,24,366	0/1:16,1:17:1.44:1,0,47	0/0:21,1:16:8.46:0,8,113	0/0:14,0:14:36.09:0,36,664	0/0:16,0:16:39.10:0,39,755	0/0:58,0:54:99:0,120,2336	0/0:11,0:10:21.06:0,21,364	0/1:19,2:19:13.41:13,0,523	0/1:18,3:17:77.78:78,0,140	1/1:2,0:2:0.47:1,0,0
chr10	53069509	.	GAGAA	G	195.66	PASS	AB=0.971;AC=9;AF=0.161;AN=56;BaseQRankSum=7.134;DP=717;FS=0.750;HRun=0;HaplotypeScore=184.5567;InbreedingCoeff=-0.0568;MQ=47.79;MQ0=24;MQRankSum=-5.628;QD=1.10;ReadPosRankSum=-3.005;VQSLOD=1.5919;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:27,1:24:99:155,0,288	0/1:9,1:9:14.72:15,0,223	0/0:42,0:14:8.77:0,9,328	0/0:64,0:21:42.86:0,43,607	0/0:16,0:16:35.15:0,35,875	0/0:23,0:19:45.04:0,45,957	0/1:48,2:46:13.34:13,0,2612	0/0:21,0:20:53.90:0,54,1277	0/0:29,0:29:63.21:0,63,1568	0/0:35,0:29:43.50:0,44,949	0/0:10,0:9:3.94:0,4,12	0/0:41,0:39:95.66:0,96,2440	0/0:27,0:27:68.26:0,68,1782	0/0:25,0:22:57.05:0,57,1371	0/1:22,0:19:47.65:48,0,453	0/1:23,1:21:29.32:29,0,531	0/0:21,0:16:9.97:0,10,221	0/1:21,0:15:53.50:54,0,351	0/0:19,1:12:30.10:0,30,708	0/0:19,0:19:10.06:0,10,213	0/0:22,0:16:0:0,0,94	0/0:15,0:15:36.10:0,36,885	0/0:17,0:17:39.13:0,39,1042	0/0:57,1:53:99:0,117,3094	0/0:9,0:8:15.05:0,15,405	0/0:24,0:21:27.06:0,27,1171	0/1:21,0:17:4:4,0,364	1/1:2,0:2:1.55:4,2,0
chr10	53069517	.	GGC	G	102.50	PASS	AB=0.942;AC=12;AF=0.214;AN=56;BaseQRankSum=8.373;DP=720;FS=5.856;HRun=0;HaplotypeScore=167.2911;InbreedingCoeff=-0.0514;MQ=47.90;MQ0=26;MQRankSum=-6.387;QD=0.50;ReadPosRankSum=-3.490;VQSLOD=1.5976;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:24:19.15:19,0,301	0/0:12,0:10:9.32:0,9,256	0/0:38,0:11:2.98:0,3,259	0/0:56,0:19:28.81:0,29,390	0/0:15,0:15:30.06:0,30,561	0/0:22,0:19:41.62:0,42,753	0/0:51,0:47:99:0,122,2414	0/0:19,0:18:48.13:0,48,908	0/0:27,0:26:57.07:0,57,1100	0/1:32,3:29:30.61:31,0,749	1/1:8,2:9:0.47:2,0,0	0/0:45,0:43:99:0,117,2184	0/0:27,0:27:70.84:0,71,1403	0/0:25,0:23:57.19:0,57,1119	0/1:22,0:19:10.19:10,0,473	0/0:26,0:21:27.52:0,28,655	0/1:20,2:17:33.09:33,0,217	0/1:18,3:15:91.05:91,0,276	0/0:21,0:13:30.99:0,31,567	0/1:19,2:20:22.67:23,0,130	0/1:23,1:17:3.62:4,0,54	0/0:18,0:18:5.26:0,5,724	0/0:16,0:16:39.13:0,39,789	0/0:62,0:58:99:0,132,2561	0/0:8,0:7:18.06:0,18,335	0/0:26,0:23:56.64:0,57,1082	0/1:17,1:15:18.44:18,0,276	1/1:2,0:2:0.47:1,0,0
chr10	53069519	.	CAG	C	86.98	PASS	AB=0.879;AC=9;AF=0.161;AN=56;BaseQRankSum=5.254;DP=737;FS=41.352;HRun=0;HaplotypeScore=167.9470;InbreedingCoeff=0.0912;MQ=45.42;MQ0=33;MQRankSum=-4.955;QD=0.60;ReadPosRankSum=-0.387;VQSLOD=0.8833;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,1:23:29.45:0,29,374	0/0:13,0:11:15.15:0,15,263	0/0:33,0:8:7.48:0,7,203	0/0:52,1:17:24.97:0,25,397	0/0:15,0:15:30.09:0,30,478	0/0:21,0:17:36.12:0,36,628	0/0:51,1:46:62.39:0,62,1948	0/0:17,0:17:36.11:0,36,588	0/0:25,1:25:54.18:0,54,926	0/1:37,1:31:7.30:7,0,687	1/1:11,0:11:0.37:2,0,0	0/0:43,2:43:99:0,102,1747	0/0:27,1:28:31.64:0,32,1100	0/0:25,0:23:57.20:0,57,991	0/1:22,2:19:2.73:3,0,446	0/0:27,2:22:8.01:0,8,592	0/1:20,4:18:45.49:45,0,291	0/1:15,5:15:64.30:64,0,252	0/0:23,0:14:27.09:0,27,450	0/0:22,1:23:13.35:0,13,193	0/1:19,5:17:42.64:73,0,43	0/0:18,0:18:29.36:0,29,602	0/0:17,0:17:39.13:0,39,683	0/0:58,4:58:99:0,126,2190	0/0:7,0:6:18.06:0,18,298	0/0:26,1:26:63.20:0,63,1032	0/0:16,0:15:7.63:0,8,177	1/1:2,0:2:0.47:1,0,0
chr10	53069553	.	C	CAGAG	1583.36	PASS	AB=0.913;AC=10;AF=0.192;AN=52;BaseQRankSum=4.409;DP=815;FS=9.429;HRun=0;HaplotypeScore=156.6168;InbreedingCoeff=-0.1376;MQ=35.98;MQ0=160;MQRankSum=-5.454;QD=6.02;ReadPosRankSum=-0.109;VQSLOD=1.9749;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:27,4:20:65.88:141,0,66	0/1:7,5:7:67.19:296,0,67	./.	./.	0/0:11,0:9:17.93:0,18,288	0/0:30,0:20:34.32:0,34,648	0/0:73,0:55:99:0,114,1866	0/1:28,0:4:29.72:89,0,30	0/0:37,0:31:57.20:0,57,990	0/1:38,1:26:99:271,0,243	0/1:20,1:15:0.12:0,0,0	0/0:50,0:39:67.66:0,68,1296	0/0:25,0:23:51.10:0,51,870	0/0:35,0:28:54.10:0,54,935	0/1:19,3:13:99:119,0,169	0/1:19,8:22:99:573,0,229	0/0:29,0:16:15.71:0,16,258	0/1:19,0:14:23.20:23,0,175	0/0:33,0:9:17.99:0,18,261	0/1:23,1:22:9.04:138,0,9	0/0:49,0:21:1.19:0,1,3	0/0:27,0:23:51.12:0,51,841	0/0:12,0:10:23.70:0,24,436	0/0:64,0:54:93.25:0,93,1610	0/0:9,0:7:12:0,12,184	0/1:40,0:31:67.14:67,0,476	0/0:20,0:12:5.77:0,6,32	0/0:5,0:2:2.52:0,3,17
chr10	53069557	.	GAGGC	G	1480.95	PASS	AB=0.863;AC=14;AF=0.269;AN=52;BaseQRankSum=7.684;DP=832;FS=13.215;HRun=0;HaplotypeScore=148.8593;InbreedingCoeff=-0.0674;MQ=32.86;MQ0=170;MQRankSum=-6.673;QD=4.54;ReadPosRankSum=1.657;VQSLOD=2.0981;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:33,2:20:18.11:18,0,168	0/0:12,0:7:5.51:0,6,199	./.	./.	0/0:11,0:9:18.06:0,18,486	0/0:26,0:17:37.32:0,37,948	0/0:75,0:54:99:0,117,2831	0/1:27,2:4:59.55:89,0,60	0/0:38,0:30:63.57:0,64,1490	0/1:27,11:25:99:273,0,396	0/0:14,8:14:0.17:0,0,2	0/0:51,0:39:80.15:0,80,1850	0/0:27,0:24:56.73:0,57,1377	0/0:35,0:28:71.10:0,71,1608	0/1:24,2:14:40.06:40,0,299	0/1:28,1:22:43.39:43,0,556	0/1:25,4:13:49.06:49,0,363	0/1:14,6:14:95.42:95,0,269	0/1:30,2:9:37.05:37,0,383	0/1:15,7:20:44.26:138,0,44	0/0:52,3:23:6.35:0,6,109	0/0:26,0:22:54.07:0,54,1255	0/0:11,0:9:24.08:0,24,657	0/0:68,0:57:99:0,99,2459	0/0:10,0:7:15.05:0,15,329	0/1:24,14:29:99:668,0,547	1/1:13,9:13:4.08:113,4,0	1/1:3,2:3:5.38:66,5,0
chr10	53069559	.	GGC	G	316.22	PASS	AB=0.975;AC=12;AF=0.222;AN=54;BaseQRankSum=8.055;DP=826;FS=14.875;HRun=0;HaplotypeScore=130.1553;InbreedingCoeff=0.1113;MQ=33.87;MQ0=170;MQRankSum=-7.443;QD=1.28;ReadPosRankSum=2.635;VQSLOD=1.6982;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:19:18.47:0,18,187	0/0:12,0:7:17.92:0,18,195	0/1:18,0:1:0:0,0,0	./.	0/0:11,0:9:18.06:0,18,363	0/0:26,0:17:39.07:0,39,736	0/0:76,0:55:99:0,121,2240	0/1:31,0:4:47.52:48,0,96	0/0:38,1:31:20.56:0,21,1119	0/1:37,1:23:61.34:61,0,307	0/0:19,2:13:0.16:0,0,2	0/0:49,0:37:86.92:0,87,1441	0/0:26,0:23:57:0,57,1068	0/0:35,0:29:75.06:0,75,1331	0/1:25,0:12:2.74:3,0,198	0/0:30,0:22:25.44:0,25,579	0/1:27,1:12:44.33:44,0,324	0/1:18,1:13:15.48:15,0,216	0/0:31,1:8:1.49:0,1,317	0/1:21,0:21:38.85:39,0,78	0/0:53,1:24:8.25:0,8,85	0/0:24,0:20:54.09:0,54,953	0/0:11,0:9:24.08:0,24,488	0/0:67,0:56:99:0,99,1870	0/0:11,0:8:17.79:0,18,279	0/1:35,4:29:99:186,0,482	1/1:22,0:13:3.89:36,4,0	1/1:6,0:3:3.44:20,3,0
chr10	53069605	.	A	AG	203.49	PASS	AB=0.821;AC=8;AF=0.148;AN=54;BaseQRankSum=4.697;DP=812;FS=3.992;HRun=0;HaplotypeScore=143.1607;InbreedingCoeff=-0.0870;MQ=47.57;MQ0=70;MQRankSum=-5.157;QD=1.12;ReadPosRankSum=2.111;VQSLOD=2.5853;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:28,2:21:0.03:0,0,90	./.	0/0:44,0:17:36.16:0,36,304	0/0:61,0:26:66.17:0,66,648	0/0:11,0:9:21.07:0,21,294	0/0:26,2:22:21.49:0,21,350	0/0:64,3:54:99:0,108,1329	0/0:46,0:21:44.85:0,45,519	0/0:34,10:36:74.91:0,75,973	0/1:16,6:15:71.82:112,0,72	0/1:12,0:8:0.09:0,0,0	0/0:37,5:35:46.10:0,46,969	0/0:24,3:25:57.08:0,57,726	0/0:29,1:27:69.08:0,69,888	0/1:15,13:15:4.95:5,0,53	0/1:15,10:16:79.48:79,0,141	0/1:25,8:18:51.98:52,0,76	0/1:11,3:11:22.70:23,0,75	0/0:10,0:3:2.84:0,3,14	0/1:14,3:15:44.12:48,0,44	0/0:45,6:18:21.47:0,21,135	0/0:23,2:22:18.34:0,18,435	0/0:7,0:6:15.05:0,15,207	0/0:51,7:45:52.83:0,53,946	0/0:12,4:14:27.09:0,27,374	0/0:26,2:18:1.88:0,2,104	0/0:17,0:15:22.33:0,22,133	0/0:6,0:4:3.77:0,4,26
chr10	53069645	.	C	CAG	54.98	PASS	AB=0.990;AC=9;AF=0.167;AN=54;BaseQRankSum=5.476;DP=865;FS=7.740;HRun=0;HaplotypeScore=146.6769;InbreedingCoeff=-0.0955;MQ=27.94;MQ0=280;MQRankSum=-3.043;QD=0.22;ReadPosRankSum=-0.044;VQSLOD=2.3448;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:24:24.50:0,24,290	0/1:10,0:5:5.84:6,0,35	1/1:9,0:3:0.45:1,0,0	./.	0/0:15,0:9:6.02:0,6,81	0/0:51,0:17:20.47:0,20,251	0/0:75,1:40:0.61:0,1,565	0/0:31,0:6:8.96:0,9,99	0/0:33,0:23:6.92:0,7,525	0/0:31,0:14:40.35:0,40,503	0/0:18,0:14:0.27:0,0,1	0/0:42,0:29:65.94:0,66,845	0/0:37,0:24:48.16:0,48,642	0/1:25,1:21:31.94:32,0,306	0/1:32,0:12:14.85:15,0,226	0/1:31,0:14:41.82:42,0,262	0/1:49,1:19:47.33:47,0,346	0/1:22,0:11:24.99:25,0,109	0/0:23,0:8:12.51:0,13,149	0/0:20,0:15:11.86:0,12,129	0/0:72,0:17:15.44:0,15,183	0/0:20,0:11:9.47:0,9,123	0/0:10,0:4:2.54:0,3,40	0/1:68,1:41:3.63:4,0,409	0/0:23,0:14:1.68:0,2,159	0/0:22,0:13:26.76:0,27,337	0/0:18,0:12:5.71:0,6,130	0/0:6,0:3:6.02:0,6,78
chr10	53069649	.	GAGGC	G	121.01	PASS	AB=0.947;AC=7;AF=0.135;AN=52;BaseQRankSum=6.872;DP=846;FS=2.212;HRun=0;HaplotypeScore=149.6626;InbreedingCoeff=-0.0333;MQ=25.93;MQ0=296;MQRankSum=-4.930;QD=0.87;ReadPosRankSum=-2.756;VQSLOD=2.3468;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:24:20.44:0,20,310	0/1:11,0:5:29.73:35,0,30	./.	./.	0/0:15,0:9:5.78:0,6,109	0/0:52,0:16:14.52:0,15,226	0/0:72,3:38:45.75:0,46,772	0/0:30,0:4:9.03:0,9,113	0/0:36,0:22:38.52:0,39,664	0/0:31,1:14:32.78:0,33,542	1/1:14,3:13:3.05:10,3,0	0/0:41,1:29:63:0,63,1054	0/0:37,0:24:45.67:0,46,757	0/0:25,0:19:0.06:0,0,385	0/0:32,0:12:18.41:0,18,293	0/0:31,0:13:13.87:0,14,351	0/1:49,2:19:25.44:25,0,436	0/0:20,0:10:18.62:0,19,163	0/0:24,0:7:16.40:0,16,171	0/1:19,1:15:41.20:41,0,85	0/0:68,3:16:14.29:0,14,203	0/0:20,0:11:6.86:0,7,101	0/0:10,0:4:2.98:0,3,55	0/0:65,1:38:3.90:0,4,529	0/1:22,0:12:29.27:29,0,204	0/0:20,0:11:26.88:0,27,365	0/1:14,4:10:86.14:99,0,86	0/0:6,0:3:0.24:0,0,32
chr10	53069657	.	GAGGC	G	463.57	PASS	AB=0.964;AC=12;AF=0.231;AN=52;BaseQRankSum=5.594;DP=781;FS=7.609;HRun=0;HaplotypeScore=135.3941;InbreedingCoeff=-0.1826;MQ=25.12;MQ0=315;MQRankSum=-2.528;QD=1.38;ReadPosRankSum=-3.382;VQSLOD=0.9314;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:42,1:20:0.05:0,0,293	0/1:6,3:5:40.73:41,0,48	./.	./.	0/0:16,0:9:5.76:0,6,96	0/0:51,0:14:16.71:0,17,252	0/0:68,0:31:29.39:0,29,335	0/0:24,0:3:6.02:0,6,109	0/1:31,0:18:20.74:21,0,499	0/0:29,1:12:24.80:0,25,388	1/1:15,1:12:3.05:10,3,0	0/0:39,1:27:64.48:0,64,1070	0/0:37,3:24:19.94:0,20,611	0/0:20,0:13:13.39:0,13,391	0/1:30,1:11:34.24:34,0,158	0/0:28,2:12:13.93:0,14,290	0/0:47,2:19:29.82:0,30,342	0/0:18,0:8:14.95:0,15,190	0/1:27,0:7:46.74:47,0,206	0/0:13,2:11:6.90:0,7,79	0/1:60,0:14:22.23:51,0,22	0/0:18,0:10:6.15:0,6,110	0/0:10,0:4:2.98:0,3,55	0/1:62,0:33:91.24:91,0,382	0/1:22,0:11:27.84:28,0,160	0/1:15,1:8:20.07:168,0,20	0/1:17,0:10:99:110,0,105	0/0:5,0:2:6.02:0,6,109
chr10	53069659	.	GGC	G	378.64	PASS	AB=0.954;AC=15;AF=0.288;AN=52;BaseQRankSum=5.163;DP=752;FS=17.064;HRun=0;HaplotypeScore=123.5427;InbreedingCoeff=-0.1858;MQ=24.83;MQ0=311;MQRankSum=-4.126;QD=0.87;ReadPosRankSum=-2.449;VQSLOD=1.0402;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:42,1:20:0.90:0,1,320	0/1:9,0:5:1.39:1,0,55	./.	./.	0/0:17,0:9:5.77:0,6,103	0/0:49,1:13:16.59:0,17,278	0/1:61,7:29:99:156,0,318	0/0:24,0:3:6.02:0,6,122	0/1:28,2:16:5.81:6,0,549	0/1:24,2:10:22.84:23,0,392	1/1:14,0:10:3.25:9,3,0	0/0:40,0:27:64.49:0,64,1144	0/0:40,0:23:21.72:0,22,649	0/0:19,0:12:14.37:0,14,429	0/1:29,1:11:21.47:21,0,280	0/0:29,1:11:21.47:0,21,330	0/1:47,0:19:21.10:21,0,294	0/0:16,0:7:14.94:0,15,200	0/1:24,0:7:8.68:9,0,226	0/0:14,0:10:9.62:0,10,139	0/1:52,5:14:4.14:60,0,4	0/1:17,1:10:45.36:45,0,111	0/0:10,0:4:2.84:0,3,61	0/1:61,2:33:23.61:24,0,424	0/1:22,0:11:2.14:2,0,166	0/1:11,3:6:0.79:104,0,1	0/1:15,0:9:33.98:34,0,156	0/0:5,0:2:6.02:0,6,122
chr10	53069681	.	GAGGC	G	273.21	PASS	AB=0.977;AC=8;AF=0.167;AN=48;BaseQRankSum=5.059;DP=683;FS=4.530;HRun=0;HaplotypeScore=99.1942;InbreedingCoeff=-0.0468;MQ=19.14;MQ0=376;MQRankSum=-3.026;QD=1.23;ReadPosRankSum=-1.497;VQSLOD=1.2893;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:9:11.87:12,0,150	1/1:10,0:3:2.92:17,3,0	./.	./.	0/0:17,0:6:2.74:0,3,53	0/0:42,0:7:6.02:0,6,109	0/0:63,0:18:19.66:0,20,177	./.	0/0:34,0:12:22.61:0,23,330	0/0:21,0:6:16.56:0,17,236	0/0:10,0:7:0.89:0,1,2	0/1:37,0:19:14.50:15,0,478	0/0:34,3:12:5.86:0,6,167	0/0:17,0:8:20.59:0,21,250	0/0:32,0:5:3.14:0,3,99	0/0:36,0:10:22.32:0,22,350	0/1:49,3:14:40.89:41,0,162	0/0:18,0:6:6.50:0,6,132	0/0:21,0:2:6.02:0,6,96	0/0:9,0:5:4.56:0,5,68	0/0:44,1:7:3.01:0,3,55	0/0:12,0:4:2.84:0,3,9	0/0:14,0:4:0.47:0,0,1	0/1:57,2:27:99:158,0,214	0/1:15,0:7:31.35:31,0,54	0/0:9,0:3:9.03:0,9,158	0/1:17,1:7:69.38:118,0,69	./.
chr10	53069689	.	GAGGC	G	315.24	PASS	AB=0.984;AC=11;AF=0.229;AN=48;BaseQRankSum=6.043;DP=672;FS=12.173;HRun=0;HaplotypeScore=102.5394;InbreedingCoeff=-0.0871;MQ=17.30;MQ0=382;MQRankSum=-2.639;QD=1.05;ReadPosRankSum=1.297;VQSLOD=1.0768;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:7:25.68:26,0,57	0/0:10,0:2:0.47:0,0,1	./.	./.	0/1:18,0:4:0:0,0,0	0/0:32,0:5:3.01:0,3,55	0/0:63,3:11:6.81:0,7,64	./.	0/0:29,2:8:12.27:0,12,253	0/1:20,0:6:9.69:10,0,110	1/1:9,0:6:1.97:6,2,0	0/1:35,1:16:30.95:31,0,306	0/0:38,0:12:20.98:0,21,282	0/0:19,0:9:22.22:0,22,292	0/1:33,0:4:4.15:4,0,49	0/0:35,1:10:23.06:0,23,290	0/1:53,1:14:47.58:48,0,142	0/1:22,0:9:0.40:0,0,111	0/0:24,0:1:3.01:0,3,56	0/0:9,0:5:1.97:0,2,8	0/0:37,0:3:3.01:0,3,55	0/0:13,0:4:2.69:0,3,8	0/0:13,0:4:0.47:0,0,1	0/1:57,3:28:99:168,0,185	0/0:15,0:9:2.52:0,3,112	0/0:9,0:3:9.03:0,9,144	0/1:18,1:8:95.66:135,0,96	./.
chr10	53069697	.	GAGGC	G	303.98	PASS	AB=0.976;AC=10;AF=0.208;AN=48;BaseQRankSum=5.710;DP=686;FS=14.576;HRun=0;HaplotypeScore=86.9997;InbreedingCoeff=-0.0625;MQ=17.95;MQ0=399;MQRankSum=-3.871;QD=1.07;ReadPosRankSum=2.759;VQSLOD=0.7614;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:4:26.57:27,0,30	./.	./.	./.	0/1:22,0:7:0:0,0,0	0/0:30,1:3:3.01:0,3,48	0/0:69,0:8:5.98:0,6,58	./.	0/0:34,0:10:23.12:0,23,342	0/1:15,0:3:2.96:3,0,49	1/1:11,0:6:2.90:20,3,0	0/1:37,0:16:4.76:5,0,450	0/1:41,1:16:4.77:5,0,403	0/0:24,0:11:27.25:0,27,404	0/0:34,0:6:4.31:0,4,112	0/0:36,0:9:24.08:0,24,409	0/1:50,3:13:43.96:44,0,102	0/0:18,1:7:8.11:0,8,176	0/0:26,0:1:3.01:0,3,46	0/0:9,0:5:0.52:0,1,3	0/0:34,2:2:3.01:0,3,51	0/0:11,0:3:2.29:0,2,6	0/0:13,0:4:0.47:0,0,1	0/1:51,2:22:99:157,0,174	0/0:15,0:9:2.61:0,3,106	0/0:10,0:2:4.26:0,4,63	0/1:20,2:6:45.68:154,0,46	0/0:5,0:1:3.01:0,3,60
chr10	53069705	.	GAGGC	G	433.65	PASS	AB=0.989;AC=11;AF=0.262;AN=42;BaseQRankSum=6.425;DP=694;FS=28.215;HRun=0;HaplotypeScore=82.1544;InbreedingCoeff=-0.1784;MQ=18.61;MQ0=405;MQRankSum=-4.635;QD=1.47;ReadPosRankSum=2.970;VQSLOD=-0.0112;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:5:16.36:16,0,40	./.	./.	./.	0/0:22,0:6:2.77:0,3,52	./.	0/0:65,4:6:3.90:0,4,63	./.	0/0:34,1:10:24.55:0,25,454	0/1:16,0:3:2.96:3,0,28	1/1:11,0:6:2.94:38,3,0	0/1:40,1:17:64.83:65,0,448	0/1:41,1:16:47.51:48,0,496	0/0:26,0:10:25.25:0,25,380	0/0:40,1:11:20.15:0,20,482	0/0:34,0:10:27.09:0,27,508	0/1:48,1:10:50.86:51,0,138	0/1:22,0:8:20.12:20,0,285	./.	0/0:10,0:5:1.72:0,2,4	./.	0/0:11,0:3:1.72:0,2,4	0/0:12,0:4:1.36:0,1,3	0/1:51,0:21:99:143,0,308	0/1:12,0:7:1.28:1,0,56	0/0:9,0:1:3.01:0,3,60	0/1:27,1:7:80.39:166,0,80	0/0:7,0:2:6.02:0,6,104
chr10	53069713	.	GAGGC	G	399.68	PASS	AB=0.982;AC=11;AF=0.262;AN=42;BaseQRankSum=6.373;DP=714;FS=33.324;HRun=0;HaplotypeScore=88.2171;InbreedingCoeff=-0.1657;MQ=20.71;MQ0=390;MQRankSum=-4.247;QD=1.30;ReadPosRankSum=1.561;VQSLOD=-0.0028;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:8:16.11:16,0,88	./.	./.	./.	0/1:25,0:8:2.07:2,0,109	./.	0/0:67,1:7:10.59:0,11,183	./.	0/0:34,1:10:27.51:0,28,497	./.	1/1:12,0:7:2.94:38,3,0	0/1:40,1:18:81.86:82,0,509	0/1:40,1:17:32.30:32,0,554	0/0:28,0:12:33.99:0,34,592	0/0:40,0:13:31.66:0,32,608	0/0:33,1:11:29.84:0,30,557	0/1:48,1:11:48.72:49,0,257	0/1:22,1:12:28.03:28,0,394	./.	0/0:9,0:4:1.36:0,1,3	0/0:39,2:6:3.01:0,3,56	0/0:10,0:4:1.83:0,2,4	0/0:13,0:5:4.73:0,5,62	0/1:49,1:23:99:150,0,526	0/1:14,0:7:1.38:1,0,55	0/0:12,0:2:3.48:0,3,62	0/1:26,1:7:99:121,0,149	0/0:10,0:5:15.05:0,15,237
chr10	53069721	.	GAGGC	G	291.85	PASS	AB=0.969;AC=8;AF=0.167;AN=48;BaseQRankSum=6.326;DP=763;FS=30.680;HRun=0;HaplotypeScore=81.1479;InbreedingCoeff=-0.0259;MQ=22.04;MQ0=381;MQRankSum=-4.895;QD=1.20;ReadPosRankSum=2.008;VQSLOD=0.0176;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:11:15.52:0,16,229	./.	./.	./.	0/0:27,0:8:11.91:0,12,213	0/0:22,1:1:3.01:0,3,36	0/0:62,0:6:14.26:0,14,247	0/0:37,0:1:3.01:0,3,54	0/0:32,0:10:26.96:0,27,493	0/0:23,0:4:8.06:0,8,100	1/1:14,0:7:3.01:38,3,0	0/1:42,2:20:81.75:82,0,589	0/1:37,2:18:46.43:46,0,580	0/0:34,0:17:48.15:0,48,901	0/0:38,1:13:35.33:0,35,647	0/0:34,0:11:31.92:0,32,611	0/1:43,1:12:44.26:44,0,398	0/1:24,0:14:1.54:2,0,628	./.	0/0:16,0:4:0.94:0,1,2	0/0:45,0:9:9.03:0,9,181	0/0:17,0:3:4.73:0,5,51	0/0:9,0:3:7.27:0,7,98	0/1:50,2:25:99:110,0,658	0/0:17,0:4:2.55:0,3,59	0/0:22,0:6:18.06:0,18,288	0/1:25,1:7:87.80:88,0,163	0/0:12,0:6:18.06:0,18,359
chr10	53071277	.	T	TTTACCTCAC	31309.70	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-5.103;DP=551;FS=0.668;HRun=0;HaplotypeScore=137.1358;InbreedingCoeff=0.9807;MQ=83.02;MQ0=0;MQRankSum=-18.299;QD=119.05;ReadPosRankSum=-0.759;VQSLOD=5.7262;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:14,14:29:75.26:3419,75,0	1/1:1,8:10:27.09:1230,27,0	0/0:19,0:19:54.19:0,54,1605	0/0:23,0:23:63.18:0,63,1643	0/0:20,0:20:51.18:0,51,1582	0/0:26,0:26:75.24:0,75,2234	0/0:14,0:14:42.13:0,42,1202	0/0:44,0:44:99:0,126,3798	0/0:16,0:16:48.16:0,48,1479	1/1:7,10:21:60.21:2568,60,0	1/1:7,10:18:45.15:2061,45,0	0/0:19,0:19:57.20:0,57,1695	0/0:25,0:25:75.26:0,75,2283	0/0:25,0:25:72.25:0,72,2206	1/1:7,14:23:63.22:2940,63,0	1/1:7,16:23:63.22:2848,63,0	1/1:7,9:16:33.09:1451,33,0	1/1:5,6:12:30.10:1422,30,0	1/1:11,10:24:69.24:2998,69,0	1/1:5,13:19:51.18:2363,51,0	1/1:6,4:11:21.07:1001,21,0	0/0:5,0:5:12.04:0,12,370	0/0:18,0:18:54.19:0,54,1635	0/0:21,0:21:63.22:0,63,1914	0/0:13,0:13:39.13:0,39,1183	1/1:7,18:28:78.27:3483,78,0	1/1:9,13:26:69.24:3234,69,0	1/1:1,2:3:6.02:294,6,0
chr10	53071476	.	CT	C	1784.26	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=8.609;DP=437;FS=3.276;HRun=4;HaplotypeScore=49.8334;InbreedingCoeff=0.8928;MQ=66.72;MQ0=0;MQRankSum=-1.004;QD=27.88;ReadPosRankSum=1.229;VQSLOD=2.8315;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,21:22:57.17:684,57,0	1/1:0,9:9:27.08:324,27,0	0/0:4,0:4:1.71:0,2,37	0/0:8,0:8:13.81:0,14,143	0/0:29,0:29:87.26:0,87,1183	0/0:17,0:17:51.17:0,51,714	0/0:7,0:7:18.06:0,18,251	0/0:34,0:33:90.29:0,90,1231	0/0:11,0:11:30.07:0,30,385	0/0:24,0:24:72.22:0,72,979	0/0:14,0:14:42.14:0,42,588	0/0:9,0:9:27.04:0,27,355	0/0:18,0:18:51.17:0,51,714	0/0:15,0:15:45.14:0,45,614	1/1:0,18:18:45.14:540,45,0	1/1:1,14:15:33.10:396,33,0	0/0:23,0:23:69.20:0,69,943	0/0:18,0:18:51.14:0,51,688	0/0:26,0:26:75.23:0,75,1020	0/0:21,0:21:60.20:0,60,840	0/0:9,0:9:24.06:0,24,317	0/0:2,0:2:6.02:0,6,84	0/0:9,0:9:21.06:0,21,279	0/0:3,0:3:9.03:0,9,126	0/0:22,0:22:66.21:0,66,910	0/0:23,0:23:60.18:0,60,795	0/0:20,0:20:60.20:0,60,832	0/0:7,0:7:21.07:0,21,294
chr10	53075064	.	G	GT	2144.13	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=4.027;DP=667;FS=0.342;HRun=8;HaplotypeScore=88.2668;InbreedingCoeff=0.5735;MQ=67.68;MQ0=10;MQRankSum=2.649;QD=9.40;ReadPosRankSum=4.148;VQSLOD=1.8023;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:65.87:0,66,575	0/0:12,0:12:32.87:0,33,278	0/0:49,0:28:29.25:0,29,303	0/0:51,0:17:9.25:0,9,142	0/0:24,0:24:30.03:0,30,395	0/0:28,0:28:48.37:0,48,607	0/0:20,0:20:48.01:0,48,434	0/0:31,0:31:62.98:0,63,562	0/0:19,0:19:28.20:0,28,398	0/1:26,0:26:13.62:136,0,14	0/1:27,0:27:5.19:155,0,5	0/0:16,0:16:48.02:0,48,435	0/0:16,0:16:41.98:0,42,375	0/0:17,0:17:44.53:0,45,381	0/0:13,0:13:29.96:0,30,266	0/0:33,0:33:90.04:0,90,818	1/1:1,26:27:35.73:665,36,0	1/1:0,23:23:54.16:623,54,0	0/1:17,0:16:11.86:40,0,12	1/1:36,0:36:29.92:256,30,0	0/1:14,0:14:19.99:49,0,20	0/0:14,0:15:38.03:0,38,328	0/0:11,0:11:32.96:0,33,290	0/0:21,0:21:56.94:0,57,503	0/0:30,0:30:81:0,81,724	0/1:22,0:22:38.30:108,0,38	1/1:24,0:24:25.38:170,25,0	1/1:12,0:12:30.82:131,31,0
chr10	53075072	.	T	TG	4882.66	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-6.247;DP=660;FS=0.000;HRun=8;HaplotypeScore=82.8881;InbreedingCoeff=0.9785;MQ=64.66;MQ0=9;MQRankSum=0.473;QD=20.96;ReadPosRankSum=2.605;VQSLOD=4.8528;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:62.87:0,63,551	0/0:12,0:12:23.99:0,24,219	0/0:39,1:21:8.16:0,8,288	0/0:39,2:16:8.20:0,8,83	0/0:27,0:27:41.95:0,42,428	0/0:31,0:31:83.93:0,84,736	0/0:19,0:19:50.98:0,51,453	0/0:26,0:26:59.98:0,60,534	0/0:18,0:18:39.90:0,40,355	1/1:3,23:26:66.11:727,66,0	1/1:2,28:30:44.60:692,45,0	0/0:21,0:21:53.85:0,54,463	0/0:18,0:18:47.93:0,48,414	0/0:20,0:20:49.13:0,49,412	0/0:13,0:13:29.96:0,30,265	0/0:31,0:31:87.04:0,87,794	1/1:27,0:27:27.08:170,27,0	1/1:23,0:23:45.08:159,45,0	1/1:3,9:11:27.07:303,27,0	1/1:5,33:38:65.68:956,66,0	1/1:2,12:14:24.07:275,24,0	0/0:16,0:16:38.87:0,39,335	0/0:13,0:13:32.93:0,33,285	0/0:23,0:23:62.98:0,63,558	0/0:28,0:28:75.02:0,75,675	1/1:6,21:27:53.99:571,54,0	1/1:2,21:23:54.15:618,54,0	1/1:0,13:13:36.10:412,36,0
chr10	53075232	.	GT	G	2099.42	PASS	AB=0.880;AC=21;AF=0.375;AN=56;BaseQRankSum=17.059;DP=904;FS=1.134;HRun=2;HaplotypeScore=249.9810;InbreedingCoeff=-0.6209;MQ=39.98;MQ0=32;MQRankSum=-10.057;QD=3.16;ReadPosRankSum=3.596;VQSLOD=0.1765;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:28,5:33:59.60:60,0,770	0/1:6,3:9:23.40:23,0,168	0/0:37,1:7:15.50:0,16,190	0/0:44,1:13:3.89:0,4,237	0/0:27,3:30:45.55:0,46,617	0/1:24,4:28:99:137,0,516	0/0:45,2:44:8.79:0,9,738	0/1:37,10:46:99:297,0,869	0/1:22,6:28:99:148,0,322	0/1:48,8:50:99:440,0,796	0/1:29,4:33:55.10:55,0,640	0/1:24,7:31:42.48:42,0,453	0/1:16,4:20:93.22:93,0,222	0/1:39,1:40:47.46:47,0,481	0/1:17,7:23:64.44:64,0,325	0/1:29,4:32:72.82:73,0,787	0/1:16,0:15:21.28:21,0,384	0/0:17,0:17:13.67:0,14,491	0/1:37,0:25:56.75:57,0,683	0/1:31,5:34:17.67:18,0,733	0/0:40,2:37:71.09:0,71,923	0/1:28,7:31:56.66:57,0,689	0/1:16,6:21:31.30:31,0,405	0/0:19,2:21:20.99:0,21,287	0/1:33,0:33:26.75:27,0,969	0/1:42,3:39:99:259,0,904	0/1:37,9:43:99:228,0,524	0/1:11,0:11:78.98:79,0,281
chr10	53075265	.	T	TG	220.86	PASS	AB=1.000;AC=28;AF=0.933;AN=30;DP=81;FS=0.000;HRun=0;HaplotypeScore=21.9252;InbreedingCoeff=0.1484;MQ=48.18;MQ0=1;QD=3.74;VQSLOD=1.9934;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:4:5.98:46,6,0	1/1:1,0:1:2.99:24,3,0	1/1:1,0:1:2.04:6,2,0	./.	1/1:2,0:2:2.99:24,3,0	./.	1/1:3,2:7:2.99:24,3,0	0/1:0,0:2:0:0,0,0	1/1:0,0:2:0.47:1,0,0	1/1:0,1:1:2.22:7,2,0	1/1:2,1:3:5.93:41,6,0	./.	./.	./.	./.	./.	./.	./.	./.	1/1:2,0:2:2.99:24,3,0	./.	1/1:1,2:2:4.24:27,4,0	1/1:1,1:2:4.23:25,4,0	1/1:3,2:5:2.97:20,3,0	1/1:1,18:19:2.99:24,3,0	0/1:0,0:4:0:0,0,0	./.	./.
chr10	53079136	.	G	GAA	4651.38	PASS	AB=0.705;AC=28;AF=0.500;AN=56;BaseQRankSum=2.998;DP=594;FS=1.204;HRun=12;HaplotypeScore=86.7049;InbreedingCoeff=0.8140;MQ=73.29;MQ0=0;MQRankSum=0.509;QD=14.31;ReadPosRankSum=-1.744;VQSLOD=3.5515;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:30:50.75:0,51,511	0/0:11,0:11:23.98:0,24,222	0/0:28,0:25:15.40:0,15,127	0/0:20,0:18:23.86:0,24,219	1/1:6,6:32:68.85:513,69,0	0/1:6,0:21:19.17:70,0,19	1/1:8,2:29:16.67:189,17,0	0/0:31,0:31:38.75:0,39,337	1/1:7,0:22:2.43:55,2,0	1/1:3,0:16:31.11:135,31,0	1/1:3,13:17:42.04:508,42,0	0/0:20,0:20:12.02:0,12,282	0/0:25,0:26:38.89:0,39,510	1/1:9,0:15:22.97:111,23,0	0/0:16,0:16:25.99:0,26,316	0/0:24,0:24:56.68:0,57,498	0/0:26,0:26:59.74:0,60,538	0/0:13,0:14:32.72:0,33,289	1/1:5,13:22:53.53:589,54,0	1/1:7,16:25:51.18:545,51,0	1/1:4,6:10:9.03:126,9,0	0/0:10,0:10:17.91:0,18,165	0/1:15,1:19:21.31:21,0,239	0/0:13,0:13:29.97:0,30,277	1/1:3,1:19:24.95:87,25,0	1/1:8,22:34:74.16:913,74,0	1/1:9,20:30:33.10:459,33,0	1/1:2,10:14:26.57:331,27,0
chr10	53079331	.	GA	G	7839.50	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=11.508;DP=669;FS=2.157;HRun=10;HaplotypeScore=77.1090;InbreedingCoeff=0.9754;MQ=78.04;MQ0=0;MQRankSum=-1.948;QD=20.15;ReadPosRankSum=1.779;VQSLOD=5.8902;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:75.16:0,75,802	0/0:12,0:12:36.10:0,36,398	0/0:15,0:15:27.49:0,27,267	0/0:17,0:16:36.07:0,36,382	1/1:5,19:24:20.79:409,21,0	1/1:2,19:21:22.95:434,23,0	1/1:7,19:26:50.97:443,51,0	1/1:4,25:29:68.98:599,69,0	1/1:3,16:19:22.04:365,22,0	1/1:6,26:32:74.92:641,75,0	1/1:2,28:31:80.01:683,80,0	0/0:22,1:23:37.11:0,37,631	0/0:29,1:34:60.71:0,61,854	1/1:2,21:23:59.27:520,59,0	0/0:26,0:26:60.16:0,60,664	0/0:23,0:24:72.02:0,72,770	0/0:18,0:18:48.11:0,48,515	0/0:16,0:16:45.10:0,45,487	1/1:7,24:32:3.25:569,3,0	1/1:4,16:20:41.97:364,42,0	1/1:6,18:24:53.98:469,54,0	0/0:16,0:16:42.10:0,42,456	0/0:30,0:30:72.17:0,72,781	0/0:23,0:23:63.10:0,63,673	1/1:2,21:23:59.99:521,60,0	1/1:3,25:28:74.96:651,75,0	1/1:8,28:36:74.57:651,75,0	1/1:1,20:21:59.98:521,60,0
chr10	53083774	.	AAGAGAGAG	A	2179.62	PASS	AB=0.741;AC=26;AF=0.500;AN=52;BaseQRankSum=2.988;DP=500;FS=20.162;HRun=0;HaplotypeScore=127.1369;InbreedingCoeff=0.5741;MQ=60.34;MQ0=21;MQRankSum=-6.439;QD=8.72;ReadPosRankSum=-1.104;VQSLOD=0.8040;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:21:14.88:0,15,404	0/0:5,0:4:6.02:0,6,135	./.	0/0:36,0:15:0.47:0,0,1	1/1:12,0:15:6.02:112,6,0	1/1:14,0:19:3.01:56,3,0	1/1:13,0:19:12.04:217,12,0	0/0:21,0:20:1.82:0,2,5	1/1:5,4:10:12.04:281,12,0	1/1:9,0:12:2.87:27,3,0	0/1:11,0:16:6.98:7,0,43	0/0:9,0:13:8.97:0,9,71	0/0:12,0:15:11.99:0,12,114	1/1:21,0:27:3.01:56,3,0	0/1:11,1:18:21.79:22,0,104	0/0:12,0:18:2.02:0,2,106	0/0:16,0:21:42.10:0,42,1099	0/0:18,0:20:30.05:0,30,891	1/1:10,7:15:10.35:340,10,0	1/1:12,5:19:14.91:296,15,0	1/1:16,0:13:2.92:17,3,0	0/0:9,0:11:11.98:0,12,98	0/0:12,0:15:5.13:0,5,209	0/0:6,0:12:17.94:0,18,142	1/1:6,0:10:12.04:211,12,0	1/1:11,6:15:9.02:195,9,0	1/1:19,11:32:23.75:521,24,0	./.
chr10	53083880	.	GC	G	2286.84	PASS	AC=6;AF=0.115;AN=52;BaseQRankSum=6.213;DP=435;FS=3.918;HRun=2;HaplotypeScore=56.7690;InbreedingCoeff=0.9976;MQ=51.38;MQ0=11;MQRankSum=-3.708;QD=33.14;ReadPosRankSum=-4.032;VQSLOD=2.1280;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:23:69.23:0,69,1034	0/0:13,0:13:36.12:0,36,539	./.	./.	0/0:23,0:23:54.18:0,54,805	0/0:13,0:13:36.12:0,36,512	0/0:19,0:15:39.12:0,39,555	1/1:0,25:25:72.22:920,72,0	0/0:10,0:10:30.10:0,30,449	0/0:17,0:14:42.14:0,42,627	0/0:16,0:15:33.11:0,33,478	0/0:15,0:15:45.15:0,45,675	0/0:14,0:14:42.14:0,42,629	0/0:13,0:13:33.11:0,33,494	0/0:10,0:10:30.10:0,30,450	0/0:14,0:14:42.14:0,42,629	1/1:0,30:30:78.25:1012,78,0	1/1:0,14:14:39.12:495,39,0	0/0:14,0:14:39.13:0,39,581	0/0:14,0:12:33.11:0,33,494	0/0:18,0:18:45.15:0,45,674	0/0:24,0:22:66.22:0,66,988	0/0:17,0:17:51.17:0,51,757	0/0:18,0:18:48.12:0,48,684	0/0:12,0:12:36.12:0,36,530	0/0:23,0:22:66.22:0,66,988	0/0:14,0:14:36.59:0,37,517	0/0:7,0:7:21.07:0,21,315
chr10	53083930	.	AGAAAC	A	4384.34	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=2.800;DP=419;FS=27.715;HRun=0;HaplotypeScore=75.8756;InbreedingCoeff=0.8579;MQ=48.17;MQ0=23;MQRankSum=-6.596;QD=24.22;ReadPosRankSum=-1.092;VQSLOD=2.5417;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:36:70.18:0,70,1314	0/0:10,0:10:4.56:0,5,363	0/0:31,0:6:7.64:0,8,103	0/0:34,0:8:18.21:0,18,176	1/1:1,26:26:17.93:179,18,0	1/1:19,0:19:44.85:579,45,0	1/1:16,0:15:35.67:400,36,0	1/1:8,0:6:17.92:199,18,0	1/1:6,0:6:9.78:197,10,0	1/1:11,0:9:21.04:279,21,0	1/1:12,0:11:6.02:88,6,0	0/0:11,0:11:32.18:0,32,420	0/0:13,0:13:13.76:0,14,289	1/1:17,0:17:39.06:491,39,0	0/0:16,0:16:33.43:0,33,557	0/0:14,0:14:20.78:0,21,463	1/1:15,0:15:36:435,36,0	1/1:11,0:10:27.03:337,27,0	1/1:4,3:3:3.01:47,3,0	1/1:3,0:3:9.03:133,9,0	1/1:4,0:4:5.82:63,6,0	0/0:24,0:24:49.09:0,49,892	0/0:22,0:21:52.21:0,52,775	0/0:22,0:22:19.03:0,19,407	1/1:3,0:3:9.03:114,9,0	1/1:12,0:12:36.11:506,36,0	1/1:9,0:9:21.06:295,21,0	1/1:1,0:1:3.01:42,3,0
chr10	53084503	.	TC	T	1571.74	PASS	AB=0.772;AC=27;AF=0.519;AN=52;BaseQRankSum=-4.180;DP=448;FS=7.377;HRun=2;HaplotypeScore=116.5360;InbreedingCoeff=-0.3153;MQ=34.46;MQ0=50;MQRankSum=-0.752;QD=3.98;ReadPosRankSum=-0.675;VQSLOD=-0.0807;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:13,2:14:0.44:4,0,0	0/0:1,1:2:0:0,0,0	./.	0/1:17,0:4:2.87:10,0,3	1/1:8,9:16:2.04:7,2,0	0/1:6,16:19:14.58:29,0,15	0/1:9,13:18:3.61:69,0,4	0/1:47,2:47:31.65:32,0,976	0/1:9,6:11:17.31:32,0,17	0/1:31,18:39:99:470,0,491	0/0:9,11:19:0.62:0,1,19	1/1:2,5:6:6.48:48,6,0	0/1:5,4:8:18.35:29,0,18	1/1:7,9:12:0.47:1,0,0	0/0:6,1:7:1.51:0,2,5	0/0:9,1:7:10.05:0,10,76	0/1:5,2:6:24.56:73,0,25	0/1:3,1:3:31.30:32,0,31	0/1:16,2:15:99:172,0,110	0/1:14,9:20:36.51:37,0,72	0/1:10,1:7:0:0,0,0	1/1:6,1:6:2.80:38,3,0	./.	0/1:9,3:11:0:1,0,0	0/1:7,12:18:0.08:1,0,0	0/1:15,13:27:99:403,0,192	0/1:12,7:17:99:177,0,126	0/1:5,1:3:14.91:32,0,15
chr10	53084504	.	C	CG	1089.45	PASS	AB=0.890;AC=23;AF=0.426;AN=54;BaseQRankSum=-2.716;DP=444;FS=7.715;HRun=0;HaplotypeScore=131.2292;InbreedingCoeff=-0.1945;MQ=34.29;MQ0=49;MQRankSum=-0.828;QD=3.36;ReadPosRankSum=0.353;VQSLOD=2.9844;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:15,0:14:0.09:0,0,0	0/0:2,0:2:0:0,0,0	./.	0/1:18,0:4:2.51:14,0,3	0/0:13,2:14:0.66:0,1,3	0/1:18,4:19:14.04:40,0,14	0/1:19,3:18:7.39:52,0,7	0/0:49,0:47:48.94:0,49,1353	0/1:9,5:10:17.26:37,0,17	0/1:44,3:37:99:234,0,526	0/0:19,2:19:1.71:0,2,26	1/1:6,0:5:4.69:25,5,0	0/1:8,0:7:3.89:4,0,20	0/1:12,3:12:0:1,0,0	0/0:7,0:7:2.29:0,2,10	0/0:10,0:7:10.84:0,11,95	0/1:6,0:6:35.37:78,0,35	0/1:4,0:3:11.90:12,0,34	0/1:16,3:17:99:197,0,172	0/1:18,4:19:37.48:37,0,60	0/1:7,2:7:0:0,0,0	1/1:7,0:6:2.92:20,3,0	0/0:6,0:5:1.17:0,1,3	1/1:11,0:10:0.47:1,0,0	0/1:14,4:17:0.08:1,0,0	0/1:26,2:27:99:299,0,239	0/1:17,2:17:99:149,0,150	0/1:7,0:3:8.28:13,0,8
chr10	53084523	.	C	CCTT	174.60	PASS	AB=0.979;AC=24;AF=0.429;AN=56;BaseQRankSum=5.467;DP=394;FS=0.000;HRun=0;HaplotypeScore=135.9114;InbreedingCoeff=0.1781;MQ=51.33;MQ0=28;MQRankSum=-2.501;QD=0.68;ReadPosRankSum=-5.688;VQSLOD=0.3091;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:16:0.09:0,0,0	0/0:3,0:3:0.47:0,0,1	0/0:17,0:5:8.39:0,8,95	0/0:36,0:12:21.83:0,22,207	1/1:22,0:22:0.33:2,0,0	0/0:18,0:16:1.80:0,2,29	1/1:19,0:16:5.07:68,5,0	0/0:19,0:18:51.01:0,51,738	0/0:10,2:9:3.61:0,4,56	0/1:36,1:31:3.79:4,0,1182	1/1:19,0:17:8.41:40,8,0	0/0:8,0:7:9.46:0,9,156	0/1:4,0:3:0.05:0,0,0	0/1:8,1:7:0:0,0,0	0/0:7,0:7:2.33:0,2,10	0/1:5,0:5:0.44:0,0,1	0/1:6,0:5:1.54:2,0,54	0/0:3,0:2:3.01:0,3,54	0/1:13,0:12:59.41:59,0,382	0/1:23,0:20:24.94:25,0,43	1/1:7,0:4:0.89:2,1,0	0/1:11,0:10:13.67:14,0,45	1/1:12,0:12:3.45:9,3,0	0/1:13,0:11:0.17:0,0,0	0/1:12,1:12:0.20:0,0,0	0/1:17,1:19:70.71:71,0,480	0/0:13,0:13:29.85:0,30,478	0/1:7,0:4:0.26:0,0,3
chr10	53085838	.	GA	G	688.61	PASS	AB=0.860;AC=8;AF=0.143;AN=56;BaseQRankSum=5.513;DP=713;FS=7.491;HRun=3;HaplotypeScore=146.8232;InbreedingCoeff=0.0280;MQ=56.12;MQ0=24;MQRankSum=-4.605;QD=5.34;ReadPosRankSum=-1.907;VQSLOD=-0.5171;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,120,1854	0/0:13,0:13:39.12:0,39,587	0/0:66,0:30:46.29:0,46,744	0/0:78,0:32:76.89:0,77,913	0/0:26,2:28:2.08:0,2,390	0/0:25,1:25:37.23:0,37,598	0/0:16,1:16:23.99:0,24,311	0/0:37,0:31:34.17:0,34,489	0/0:23,0:22:46.99:0,47,633	0/1:17,4:16:99:202,0,251	1/1:8,1:9:5.95:44,6,0	0/0:30,0:30:87.28:0,87,1346	0/0:29,0:29:87.28:0,87,1361	0/0:23,0:22:20.36:0,20,496	0/0:26,0:26:78.25:0,78,1185	0/0:28,0:28:84.27:0,84,1306	0/0:12,0:11:18.03:0,18,213	0/0:5,0:5:1.01:0,1,75	0/1:25,4:29:43.43:43,0,646	0/1:13,1:11:39.47:69,0,39	0/1:13,5:16:14.43:143,0,14	0/0:23,0:23:66.22:0,66,1036	0/0:22,0:22:66.23:0,66,1052	0/0:28,0:28:78.26:0,78,1228	0/0:26,0:23:33.43:0,33,654	0/1:16,6:19:99:267,0,233	0/1:15,1:13:53.13:53,0,59	0/0:3,0:3:3.01:0,3,47
chr10	53085846	.	GA	G	4728.20	PASS	AC=32;AF=0.593;AN=54;BaseQRankSum=13.801;DP=743;FS=13.198;HRun=2;HaplotypeScore=141.1930;InbreedingCoeff=0.9404;MQ=58.13;MQ0=28;MQRankSum=-7.687;QD=13.78;ReadPosRankSum=-6.276;VQSLOD=1.5553;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,116,1623	0/0:11,0:11:33.10:0,33,463	0/0:70,0:31:61.68:0,62,742	0/0:84,0:37:45.94:0,46,700	1/1:28,4:32:38.48:283,38,0	1/1:22,5:25:46.95:305,47,0	1/1:19,2:20:33.03:189,33,0	1/1:15,27:34:76.23:933,76,0	1/1:20,4:23:48.44:298,48,0	1/1:18,4:17:44.13:412,44,0	./.	0/0:28,0:28:78.26:0,78,1139	0/0:31,0:31:87.28:0,87,1273	1/1:24,2:25:46.99:299,47,0	0/0:23,0:23:69.20:0,69,970	0/0:28,0:28:84.28:0,84,1224	1/1:9,0:9:6.84:38,7,0	1/1:1,4:5:15.04:178,15,0	1/1:26,5:31:25.25:661,25,0	1/1:9,9:15:9:99,9,0	1/1:10,8:16:11.06:119,11,0	0/0:21,1:22:63.21:0,63,920	0/0:23,0:23:68.26:0,68,970	0/0:25,1:26:69.22:0,69,990	1/1:22,1:22:43.90:281,44,0	1/1:16,6:18:42.75:472,43,0	1/1:16,1:15:11.85:135,12,0	1/1:4,0:4:3:28,3,0
chr10	53085847	.	A	AG	4220.45	PASS	AB=0.862;AC=26;AF=0.481;AN=54;BaseQRankSum=10.201;DP=730;FS=22.343;HRun=1;HaplotypeScore=137.5182;InbreedingCoeff=0.5121;MQ=57.62;MQ0=28;MQRankSum=-8.858;QD=12.71;ReadPosRankSum=-6.620;VQSLOD=0.8171;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:41:99:0,118,1564	0/0:11,0:11:33.10:0,33,439	0/0:70,0:30:61.70:0,62,726	0/0:83,0:34:52.02:0,52,697	0/1:23,6:29:20.94:104,0,21	0/1:22,6:26:9.26:104,0,9	0/1:17,4:20:7.69:89,0,8	1/1:30,7:30:74.14:1000,74,0	0/1:24,1:24:54.10:54,0,62	1/1:5,18:18:48.13:644,48,0	./.	0/0:28,0:28:78.26:0,78,1079	0/0:30,0:30:87.29:0,87,1200	0/1:19,5:23:39:88,0,39	0/0:24,0:24:69.20:0,69,922	0/0:28,0:28:84.28:0,84,1158	1/1:0,9:9:6.02:96,6,0	1/1:4,1:5:15.04:180,15,0	1/1:10,22:32:30.16:826,30,0	1/1:10,8:15:9.02:124,9,0	1/1:9,4:11:9.50:115,10,0	0/0:22,0:22:63.21:0,63,870	0/0:23,0:24:69.19:0,69,933	0/0:25,0:25:69.22:0,69,938	0/1:21,3:22:17.82:18,0,90	1/1:7,15:18:42.14:568,42,0	1/1:3,15:16:11.79:163,12,0	1/1:0,4:4:3.01:48,3,0
chr10	53085848	.	AG	A	4406.72	PASS	AB=1.000;AC=27;AF=0.500;AN=54;BaseQRankSum=12.649;DP=728;FS=12.934;HRun=1;HaplotypeScore=134.2500;InbreedingCoeff=0.6650;MQ=57.74;MQ0=28;MQRankSum=-5.979;QD=13.69;ReadPosRankSum=-4.308;VQSLOD=2.1248;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,116,1699	0/0:10,0:10:30.07:0,30,442	0/0:69,0:30:63.06:0,63,871	0/0:82,1:33:66.20:0,66,748	1/1:11,17:28:47.87:595,48,0	1/1:11,17:26:48.04:626,48,0	1/1:6,15:20:38.73:491,39,0	1/1:37,0:30:13.93:272,14,0	1/1:6,19:24:52.68:688,53,0	1/1:23,0:18:1.32:82,1,0	./.	0/0:28,0:28:81.24:0,81,1202	0/0:31,0:31:86.96:0,87,1327	1/1:8,15:22:37.99:514,38,0	0/0:25,0:25:72.22:0,72,1067	0/0:28,0:28:84.27:0,84,1274	0/0:9,0:9:0.99:0,1,5	1/1:5,0:5:14.16:78,14,0	0/1:32,0:32:99:180,0,120	1/1:18,0:15:4.24:37,4,0	1/1:13,0:11:8.87:40,9,0	0/0:22,0:22:63.21:0,63,962	0/0:24,0:24:69.67:0,70,1021	0/0:24,0:24:66.21:0,66,987	1/1:7,16:22:46.33:607,46,0	0/1:22,0:18:10.45:142,0,10	0/1:19,0:17:34.64:47,0,35	1/1:4,0:4:2.37:8,2,0
chr10	53088341	.	TC	T	10193.13	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=12.437;DP=657;FS=13.791;HRun=6;HaplotypeScore=73.8426;InbreedingCoeff=0.9980;MQ=69.97;MQ0=4;MQRankSum=-1.108;QD=26.61;ReadPosRankSum=1.315;VQSLOD=4.1448;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,120,1553	0/0:8,0:8:24.08:0,24,316	0/0:32,0:23:38.76:0,39,564	0/0:30,1:23:36.38:0,36,396	1/1:0,19:19:54.14:580,54,0	1/1:3,24:27:63.16:677,63,0	1/1:4,13:17:33.08:355,33,0	1/1:4,21:24:54.12:571,54,0	1/1:3,23:26:66.16:708,66,0	1/1:1,27:27:78.19:838,78,0	1/1:3,15:17:42.11:451,42,0	0/0:19,0:19:51.17:0,51,671	0/0:29,0:29:81.24:0,81,1034	1/1:0,24:24:66.17:709,66,0	0/0:31,0:31:90.28:0,90,1165	0/0:19,1:20:24.92:0,25,661	1/1:3,35:38:77.82:837,78,0	1/1:0,11:11:27.07:290,27,0	1/1:4,16:19:45.11:483,45,0	1/1:1,19:20:51.13:548,51,0	1/1:1,17:17:42.11:451,42,0	0/0:26,0:26:69.22:0,69,908	0/0:12,0:12:30.10:0,30,394	0/0:23,0:23:57.17:0,57,717	1/1:3,29:32:87.69:935,88,0	1/1:3,29:32:87.22:935,87,0	1/1:0,21:20:60.11:632,60,0	1/1:0,7:7:18.05:193,18,0
chr10	53088444	.	CCTGT	C	6206.05	PASS	AB=1.000;AC=32;AF=0.571;AN=56;BaseQRankSum=15.913;DP=559;FS=3.415;HRun=0;HaplotypeScore=147.0012;InbreedingCoeff=0.8280;MQ=66.40;MQ0=3;MQRankSum=-4.341;QD=21.18;ReadPosRankSum=-0.595;VQSLOD=4.6438;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:85.03:0,85,1397	0/0:7,0:7:18.03:0,18,285	0/0:22,0:20:60.02:0,60,704	0/0:28,0:25:63.77:0,64,884	1/1:15,2:17:34.85:395,35,0	1/1:13,5:18:49.16:341,49,0	1/1:13,0:13:29.86:302,30,0	1/1:21,0:21:59.99:561,60,0	1/1:14,3:17:38.67:496,39,0	1/1:5,21:26:1.57:526,2,0	1/1:0,12:12:8.88:58,9,0	0/0:23,0:23:66.11:0,66,1132	0/0:22,0:22:60.16:0,60,1020	1/1:14,4:18:31.89:255,32,0	0/0:26,0:26:75.17:0,75,1266	0/0:35,0:35:99:0,105,1912	0/1:30,0:30:72.35:165,0,72	0/1:16,0:16:3.09:107,0,3	1/1:18,1:19:56.76:596,57,0	1/1:13,3:16:36.15:355,36,0	1/1:16,0:15:20.98:262,21,0	0/0:19,0:19:48.08:0,48,681	0/0:13,0:13:36.04:0,36,599	0/0:31,0:31:85.50:0,86,1660	1/1:5,1:6:14.72:209,15,0	1/1:11,8:18:51.09:576,51,0	1/1:23,3:24:70.93:902,71,0	1/1:3,0:3:9.01:101,9,0
chr10	53088468	.	CCTGTCTGTCTGTCTGTCTGTCTGT	C	5215.81	PASS	AB=0.890;AC=25;AF=0.500;AN=50;BaseQRankSum=10.551;DP=524;FS=9.726;HRun=0;HaplotypeScore=315.4953;InbreedingCoeff=0.5828;MQ=52.15;MQ0=9;MQRankSum=-6.642;QD=24.37;ReadPosRankSum=0.592;VQSLOD=2.1519;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:46:99:0,114,6154	0/0:8,0:8:21.07:0,21,1473	./.	./.	1/1:8,12:19:14.96:276,15,0	1/1:8,4:12:21.07:877,21,0	1/1:9,0:9:2.96:19,3,0	0/0:7,0:5:1.25:0,1,3	1/1:15,3:18:27.02:922,27,0	0/1:19,2:18:99:376,0,252	1/1:10,1:11:6.02:202,6,0	0/0:26,0:26:63.22:0,63,4774	0/0:32,0:32:72.72:0,73,4582	1/1:13,4:16:15.05:622,15,0	0/0:33,0:32:78.27:0,78,5867	0/0:31,0:31:75.26:0,75,6893	0/1:17,8:25:99:151,0,588	0/1:14,0:14:32.48:240,0,32	1/1:9,1:10:5.95:205,6,0	1/1:8,11:18:15.05:497,15,0	0/0:20,0:15:3.01:0,3,90	0/0:22,0:22:45.15:0,45,2475	0/0:23,0:21:48.16:0,48,2814	0/0:38,0:39:99:0,99,8102	1/1:4,1:5:3.01:143,3,0	1/1:12,0:12:2.97:77,3,0	1/1:18,3:20:14.94:610,15,0	./.
chr10	53089101	.	T	TGC	1511.14	PASS	AB=0.952;AC=22;AF=0.393;AN=56;BaseQRankSum=4.025;DP=593;FS=23.505;HRun=0;HaplotypeScore=112.2020;InbreedingCoeff=0.3306;MQ=52.56;MQ0=14;MQRankSum=-1.819;QD=6.04;ReadPosRankSum=-0.099;VQSLOD=1.5312;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:56.92:0,57,874	0/0:13,0:13:33.05:0,33,413	0/0:52,0:17:15.36:0,15,229	0/0:41,0:22:45.96:0,46,525	1/1:17,0:17:23.83:225,24,0	1/1:12,0:13:8.89:59,9,0	1/1:7,17:24:2.88:57,3,0	0/1:37,0:33:73.13:359,0,73	0/0:7,0:7:2.92:0,3,25	1/1:14,0:14:17.83:211,18,0	0/1:2,0:2:0:0,0,0	0/0:36,0:36:99:0,99,1238	0/0:26,0:26:75.06:0,75,939	0/1:19,0:19:36.06:38,0,36	0/0:35,0:35:96.17:0,96,1258	0/0:25,0:24:72.10:0,72,922	0/1:5,0:13:22.97:23,0,32	0/1:8,0:7:34.02:34,0,42	0/1:15,0:12:68.19:68,0,89	1/1:17,0:16:17.98:188,18,0	1/1:6,9:15:8.99:123,9,0	0/0:20,0:19:48.49:0,48,560	0/0:25,0:25:68.63:0,69,907	0/0:22,0:22:57.09:0,57,736	1/1:4,0:20:2.87:32,3,0	0/1:13,0:12:19.37:130,0,19	0/1:23,0:23:46.63:145,0,47	0/0:3,0:3:1.18:0,1,3
chr10	53089450	.	A	AC	5029.17	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=7.411;DP=695;FS=11.750;HRun=7;HaplotypeScore=82.0771;InbreedingCoeff=0.9994;MQ=86.80;MQ0=0;MQRankSum=-3.208;QD=29.24;ReadPosRankSum=1.802;VQSLOD=4.5848;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:81.12:0,81,781	0/0:16,0:16:48.08:0,48,463	0/0:27,0:27:62.94:0,63,584	0/0:25,0:24:53.94:0,54,493	0/0:24,0:24:54.09:0,54,521	0/0:21,0:21:60.09:0,60,578	0/0:25,0:25:66.09:0,66,632	0/0:31,0:31:60.08:0,60,579	0/0:29,0:29:75.06:0,75,709	1/1:6,19:25:57.17:680,57,0	1/1:1,11:12:27.08:321,27,0	0/0:26,0:26:75.11:0,75,717	0/0:30,0:30:84.13:0,84,810	0/0:28,0:28:81.08:0,81,772	0/0:37,0:37:99:0,99,950	0/0:32,0:32:87.13:0,87,840	0/0:26,0:26:63.05:0,63,595	0/0:9,0:9:27.04:0,27,261	1/1:0,11:11:33.10:399,33,0	1/1:3,24:26:60.14:706,60,0	1/1:1,37:38:96.29:1160,96,0	0/0:29,0:29:81.13:0,81,780	0/0:21,0:21:60.07:0,60,569	0/0:24,0:24:66.06:0,66,624	0/0:32,0:32:78.10:0,78,747	1/1:5,23:28:63.19:761,63,0	1/1:2,20:22:57.17:688,57,0	1/1:2,7:9:27.07:314,27,0
chr10	53091979	.	AC	A	1011.26	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.009;DP=776;FS=3.596;HRun=1;HaplotypeScore=74.5701;InbreedingCoeff=0.9997;MQ=84.08;MQ0=0;MQRankSum=-3.470;QD=34.87;ReadPosRankSum=1.566;VQSLOD=3.6816;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,102,1601	0/0:16,0:16:48.16:0,48,764	0/0:24,0:24:69.23:0,69,1083	0/0:23,0:23:59.50:0,60,892	0/0:36,0:36:99:0,108,1724	0/0:25,0:25:75.26:0,75,1199	0/0:29,0:29:87.28:0,87,1361	0/0:45,0:45:99:0,135,2136	0/0:28,0:28:84.29:0,84,1343	0/0:29,0:29:87.30:0,87,1391	0/0:18,0:18:54.18:0,54,862	0/0:23,0:23:69.24:0,69,1098	0/0:37,0:37:99:0,111,1724	0/0:27,0:27:81.28:0,81,1294	0/0:38,0:38:99:0,114,1794	0/0:29,0:29:81.26:0,81,1265	1/1:0,14:14:39.13:545,39,0	1/1:0,15:15:42.14:587,42,0	0/0:12,0:12:36.12:0,36,576	0/0:36,0:36:99:0,108,1724	0/0:20,0:20:60.20:0,60,959	0/0:36,0:36:99:0,108,1726	0/0:22,0:22:63.21:0,63,1007	0/0:38,0:38:99:0,114,1818	0/0:27,0:27:81.28:0,81,1294	0/0:36,0:36:99:0,108,1684	0/0:46,0:46:99:0,138,2179	0/0:11,0:11:33.11:0,33,527
chr10	53092372	.	GGTGTGT	G	869.97	PASS	AB=1.000;AC=15;AF=0.288;AN=52;BaseQRankSum=-0.483;DP=633;FS=2.946;HRun=0;HaplotypeScore=142.0647;InbreedingCoeff=0.6659;MQ=62.26;MQ0=31;MQRankSum=0.210;QD=5.34;ReadPosRankSum=1.007;VQSLOD=2.7358;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:24:11.18:11,0,167	0/0:8,0:8:12.04:0,12,297	./.	0/0:37,0:17:0.47:0,0,1	1/1:12,1:12:8.60:174,9,0	1/1:16,1:17:11.81:200,12,0	1/1:17,9:26:1.55:4,2,0	0/0:36,0:35:30.49:0,30,457	1/1:14,1:18:22.62:402,23,0	0/0:26,0:26:27.08:0,27,587	0/0:20,0:18:27.08:0,27,650	0/0:24,0:24:23.89:0,24,588	0/0:27,0:27:42.59:0,43,914	1/1:9,8:19:3.01:50,3,0	0/0:23,0:23:20.94:0,21,607	0/0:12,0:12:15.52:0,16,334	1/1:24,0:26:7.49:107,7,0	1/1:11,0:11:6.02:83,6,0	0/0:23,0:22:11.99:0,12,210	0/0:23,0:22:33.09:0,33,697	0/0:29,0:26:3.01:0,3,73	0/0:28,0:28:24.07:0,24,491	0/0:14,0:12:3.01:0,3,63	0/0:32,0:32:39.12:0,39,879	./.	0/0:30,0:30:44.34:0,44,771	0/0:22,0:21:27.08:0,27,551	0/0:7,0:4:3.01:0,3,68
chr10	53092404	.	TGTGTGTGTGTGTGAGAGAGA	T	1406.30	PASS	AB=0.993;AC=9;AF=0.173;AN=52;BaseQRankSum=8.398;DP=557;FS=38.690;HRun=0;HaplotypeScore=250.8696;InbreedingCoeff=-0.0103;MQ=42.38;MQ0=51;MQRankSum=-7.095;QD=8.73;ReadPosRankSum=-1.030;VQSLOD=1.0977;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:27:39.59:0,40,1264	0/0:6,0:6:15.05:0,15,845	./.	./.	0/0:17,0:14:0.88:0,1,11	0/0:13,0:12:15.01:0,15,222	0/0:31,0:26:21.70:0,22,224	0/0:26,0:23:44.52:0,45,1304	0/1:16,0:16:7.06:7,0,201	0/1:22,0:20:99:208,0,1422	0/0:20,0:19:30.57:0,31,1376	0/0:24,0:23:39.71:0,40,1927	0/0:24,0:23:52.53:0,53,2416	0/1:17,0:17:17.24:99,0,17	0/0:24,0:24:48.05:0,48,1695	0/0:15,0:15:21.80:0,22,838	0/1:19,1:18:99:347,0,176	1/1:7,6:11:8.12:331,8,0	0/1:21,0:18:88.34:88,0,817	0/0:32,0:30:43.02:0,43,1591	0/0:22,0:17:6.02:0,6,194	0/0:30,0:28:30.21:0,30,1399	0/0:12,0:10:12.01:0,12,306	0/0:34,0:34:66.12:0,66,3103	0/0:15,0:15:7.79:0,8,66	0/1:31,0:31:99:278,0,1768	0/1:21,0:19:99:183,0,1329	0/0:7,0:1:3.01:0,3,135
chr10	53092416	.	TGAGAGAGAGAGAGA	T	2856.56	PASS	AB=0.924;AC=11;AF=0.220;AN=50;BaseQRankSum=6.249;DP=523;FS=21.084;HRun=0;HaplotypeScore=195.0678;InbreedingCoeff=0.5270;MQ=42.29;MQ0=41;MQRankSum=-4.878;QD=20.70;ReadPosRankSum=1.421;VQSLOD=1.0145;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:28:1.41:0,1,1364	0/0:5,0:5:6.02:0,6,296	./.	./.	0/0:20,0:17:5.51:0,6,87	0/0:11,0:10:8.86:0,9,196	0/0:28,0:24:19.57:0,20,445	0/0:23,0:21:20.28:0,20,244	0/0:15,0:15:6.91:0,7,136	1/1:17,8:23:21.12:857,21,0	0/0:16,3:19:0:0,0,0	0/0:23,0:23:18.96:0,19,849	0/0:26,0:25:27.06:0,27,793	0/0:20,0:20:5.30:0,5,233	0/0:23,0:23:24.55:0,25,783	0/0:16,0:17:20.28:0,20,638	0/1:18,0:16:25.43:25,0,496	1/1:12,0:11:6.02:92,6,0	1/1:14,4:16:12.01:371,12,0	0/0:22,6:29:2.29:0,2,6	0/1:19,0:14:0:0,0,0	0/0:27,0:25:12.04:0,12,586	0/0:11,0:9:6.02:0,6,271	0/0:30,0:30:39.58:0,40,2028	0/0:14,0:14:12.04:0,12,277	1/1:17,9:28:33.02:1222,33,0	0/1:12,3:15:6.12:436,0,6	./.
chr10	53092944	.	A	AG	7094.62	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=19.498;DP=702;FS=1.364;HRun=7;HaplotypeScore=113.2161;InbreedingCoeff=0.9966;MQ=80.98;MQ0=0;MQRankSum=-3.321;QD=27.93;ReadPosRankSum=0.171;VQSLOD=3.9932;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:87.08:0,87,831	0/0:11,0:11:33.05:0,33,319	0/0:31,0:32:54.15:0,54,659	0/0:20,0:20:15.18:0,15,320	0/0:28,0:28:84.09:0,84,795	0/0:26,0:26:69.11:0,69,666	0/0:27,0:27:63.08:0,63,602	1/1:20,0:20:48.03:450,48,0	0/0:24,0:24:66.10:0,66,637	1/1:5,16:21:51.13:598,51,0	1/1:3,21:24:63.19:756,63,0	0/0:27,0:27:72.10:0,72,691	0/0:26,0:26:75.09:0,75,713	0/0:26,0:26:66.08:0,66,631	0/0:34,0:34:93.12:0,93,890	0/0:40,0:40:99:0,114,1085	1/1:6,20:26:66.13:763,66,0	1/1:3,15:19:45.14:541,45,0	1/1:4,14:18:42.11:490,42,0	1/1:6,27:33:66.16:774,66,0	1/1:5,16:21:48.15:576,48,0	0/0:26,0:26:74.99:0,75,701	0/0:25,0:25:57.08:0,57,550	0/0:24,0:24:72.12:0,72,695	0/0:15,0:15:45.04:0,45,424	1/1:8,25:33:81.23:944,81,0	1/1:5,28:32:84.21:988,84,0	1/1:0,6:6:18.06:216,18,0
chr10	53092945	.	G	GC	1938.06	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=20.010;DP=702;FS=0.969;HRun=0;HaplotypeScore=130.3287;InbreedingCoeff=0.5500;MQ=80.90;MQ0=0;MQRankSum=-1.986;QD=7.60;ReadPosRankSum=3.823;VQSLOD=3.5158;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,108,1381	0/0:11,0:11:33.11:0,33,461	0/0:32,0:32:80.71:0,81,1079	0/0:19,0:19:52.02:0,52,628	0/0:28,0:28:84.28:0,84,1170	0/0:26,0:26:78.24:0,78,1043	0/0:27,0:27:81.19:0,81,1028	1/1:3,17:20:56.93:764,57,0	0/0:24,0:24:72.21:0,72,970	1/1:21,0:21:19.62:112,20,0	0/1:25,0:25:15.14:155,0,15	0/0:27,0:27:81.25:0,81,1085	0/0:27,0:27:78.23:0,78,1065	0/0:26,0:26:78.21:0,78,1022	0/0:33,0:33:99:0,99,1349	0/0:40,0:40:99:0,120,1644	1/1:25,0:25:7.06:150,7,0	1/1:18,0:18:20.24:127,20,0	0/1:20,0:20:55.06:84,0,55	0/1:33,0:33:90.66:181,0,91	0/1:20,0:20:49.35:107,0,49	0/0:26,0:26:78.25:0,78,1064	0/0:24,0:24:69.18:0,69,887	0/0:24,0:24:72.24:0,72,1005	0/0:16,0:16:45.15:0,45,627	0/1:34,0:34:34.30:165,0,34	1/1:33,0:32:9.67:222,10,0	1/1:6,0:6:15.82:64,16,0
chr10	53097047	.	TTCTC	T	52.52	PASS	AB=1.000;AC=11;AF=0.393;AN=28;BaseQRankSum=2.725;DP=499;FS=3.897;HRun=0;HaplotypeScore=82.3810;InbreedingCoeff=0.4671;MQ=69.51;MQ0=10;MQRankSum=-0.361;QD=0.54;ReadPosRankSum=-0.492;VQSLOD=1.3646;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:17,0:16:0:0,0,0	./.	./.	./.	./.	1/1:15,0:15:0.47:1,0,0	./.	./.	0/0:10,0:10:6:0,6,51	0/0:27,0:27:19.28:0,19,241	./.	0/0:19,0:19:11.98:0,12,98	./.	0/0:14,0:14:6:0,6,51	0/0:9,0:13:5.49:0,5,24	0/0:12,0:11:4.81:0,5,30	1/1:16,0:19:6.01:56,6,0	./.	0/0:21,0:21:3:0,3,28	./.	1/1:13,1:14:2.58:45,3,0	./.	1/1:13,0:12:0.47:1,0,0	./.	./.	0/0:22,0:22:9.03:0,9,137	1/1:15,4:19:1.38:43,1,0	./.
chr10	53100043	.	CTT	C	3917.67	PASS	AB=0.559;AC=15;AF=0.268;AN=56;BaseQRankSum=8.841;DP=692;FS=0.345;HRun=13;HaplotypeScore=94.3319;InbreedingCoeff=0.8438;MQ=72.11;MQ0=0;MQRankSum=-0.602;QD=21.89;ReadPosRankSum=2.154;VQSLOD=3.4186;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:32:89.75:0,90,1201	0/0:14,0:16:41.61:0,42,541	0/0:25,1:24:1.61:0,2,392	0/0:16,0:16:17.04:0,17,141	0/0:40,0:49:99:0,104,1388	0/0:25,0:31:71.70:0,72,945	0/0:15,1:18:2.87:0,3,434	0/0:29,0:35:80.73:0,81,1067	0/0:22,2:25:30.44:0,30,727	1/1:2,27:29:75.07:727,75,0	1/1:3,21:25:56.74:535,57,0	0/0:17,0:17:47.23:0,47,627	0/0:32,0:35:86.74:0,87,1150	0/0:17,0:20:45.13:0,45,604	0/0:20,0:22:63.20:0,63,882	0/0:20,0:20:45.10:0,45,577	0/0:19,0:22:58.61:0,59,726	0/0:22,0:24:51.12:0,51,661	1/1:2,14:16:42:393,42,0	1/1:4,21:26:58.47:562,58,0	0/1:4,13:19:34.94:351,0,35	0/0:26,0:33:89.22:0,89,1123	0/0:19,0:22:53.09:0,53,653	0/0:12,0:17:43.09:0,43,497	0/0:25,0:30:80.21:0,80,1018	1/1:10,13:25:38.36:393,38,0	1/1:2,22:25:65.83:623,66,0	1/1:2,11:14:35.79:332,36,0
chr10	53101908	.	GAAAGAAAGAAAGAA	G	296.15	PASS	AB=0.888;AC=5;AF=0.089;AN=56;BaseQRankSum=3.584;DP=408;FS=8.262;HRun=0;HaplotypeScore=151.3981;InbreedingCoeff=-0.1169;MQ=48.60;MQ0=21;MQRankSum=0.237;QD=5.59;ReadPosRankSum=2.513;VQSLOD=2.1554;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:56.21:0,56,1788	0/0:5,0:5:12.04:0,12,328	0/1:3,0:2:10.26:10,0,37	0/0:3,0:2:2.98:0,3,21	0/0:11,0:11:23.86:0,24,368	0/1:16,0:14:99:109,0,239	0/1:15,0:13:71.32:71,0,249	0/0:32,0:30:69.31:0,69,913	0/0:13,0:13:21.31:0,21,197	0/0:11,0:11:33.10:0,33,1208	0/0:17,0:17:27.08:0,27,780	0/0:15,0:15:18.06:0,18,715	0/0:21,0:21:14.82:0,15,477	0/0:13,0:11:9.02:0,9,104	0/0:23,0:23:66.16:0,66,2124	0/0:16,0:14:42.14:0,42,1372	0/1:5,9:13:77.45:122,0,77	0/1:4,0:5:28.10:98,0,28	0/0:12,0:6:18.06:0,18,551	0/0:15,0:12:27.08:0,27,810	0/0:6,0:4:12.04:0,12,454	0/0:18,0:16:30.10:0,30,1132	0/0:19,0:19:31.35:0,31,978	0/0:21,0:18:25.50:0,25,747	0/0:15,0:15:3.74:0,4,65	0/0:22,0:21:57.19:0,57,2381	0/0:21,0:20:60.19:0,60,2165	0/0:3,0:3:9.03:0,9,428
chr10	53101916	.	GAAAGAAAGAAAGAAAGAAAGAA	G	1066.64	PASS	AB=0.943;AC=8;AF=0.154;AN=52;BaseQRankSum=4.936;DP=394;FS=3.358;HRun=0;HaplotypeScore=190.5503;InbreedingCoeff=0.0450;MQ=45.54;MQ0=21;MQRankSum=-2.976;QD=9.20;ReadPosRankSum=-3.803;VQSLOD=1.8624;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:20:54.19:0,54,2230	0/0:5,0:5:12.03:0,12,356	./.	./.	0/0:12,0:12:8.94:0,9,390	0/1:15,0:12:20.81:21,0,150	0/1:14,0:12:99:159,0,146	0/1:16,17:31:87.89:608,0,88	0/0:10,0:10:18.04:0,18,233	0/1:13,0:12:47.86:48,0,1299	0/0:13,0:13:15.04:0,15,647	0/0:14,0:14:18.06:0,18,751	0/0:19,0:19:11.98:0,12,446	0/0:15,0:13:6.02:0,6,196	0/0:20,0:20:57.18:0,57,2452	0/0:17,0:15:45.15:0,45,1726	0/1:15,0:14:34.73:103,0,35	1/1:5,0:5:8.69:236,9,0	0/0:11,0:6:14.41:0,14,520	0/0:13,0:10:20.56:0,21,813	0/0:6,0:4:9.03:0,9,438	0/0:19,0:17:30.10:0,30,1151	0/0:22,0:20:33:0,33,1067	0/0:23,0:20:29.56:0,30,776	0/0:15,0:15:17.97:0,18,178	0/1:21,0:19:25.34:25,0,2542	0/0:18,0:17:48.15:0,48,2182	0/0:3,0:3:9.03:0,9,479
chr10	53101924	.	GAAAGAAAGAA	G	1751.02	PASS	AB=0.990;AC=18;AF=0.346;AN=52;BaseQRankSum=4.536;DP=394;FS=0.000;HRun=0;HaplotypeScore=121.2251;InbreedingCoeff=0.3749;MQ=44.06;MQ0=29;MQRankSum=-1.801;QD=10.42;ReadPosRankSum=-0.513;VQSLOD=2.1894;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:23:63.15:0,63,1545	0/0:4,0:4:9:0,9,223	./.	./.	0/1:10,0:10:22.17:22,0,89	1/1:13,0:10:27.06:499,27,0	1/1:15,0:12:6.12:374,6,0	0/1:33,0:31:24.03:24,0,372	1/1:1,7:7:9.03:295,9,0	0/1:13,0:12:15.06:15,0,864	0/0:11,0:11:12.04:0,12,453	0/0:16,0:14:15.05:0,15,609	0/0:21,0:20:8.88:0,9,309	1/1:15,0:13:5.86:35,6,0	0/0:18,0:18:51.15:0,51,1581	0/0:17,0:15:45.14:0,45,1216	0/1:15,0:15:28.64:107,0,29	1/1:4,0:4:4.74:118,5,0	0/1:13,0:9:11.04:11,0,476	0/1:13,0:10:46.42:46,0,451	0/0:6,0:4:9.03:0,9,311	0/0:20,0:18:30.03:0,30,942	0/0:23,0:18:27.13:0,27,642	0/0:22,0:19:18.02:0,18,458	1/1:2,13:14:12.04:379,12,0	0/0:24,0:21:17.47:0,17,1691	0/0:16,0:14:38.73:0,39,1492	0/0:3,0:3:9.03:0,9,343
chr10	53101928	.	GAAAGAA	G	1385.37	PASS	AB=0.961;AC=17;AF=0.327;AN=52;BaseQRankSum=5.532;DP=403;FS=2.007;HRun=0;HaplotypeScore=106.4458;InbreedingCoeff=0.3115;MQ=43.51;MQ0=33;MQRankSum=-2.524;QD=7.83;ReadPosRankSum=-0.648;VQSLOD=2.2117;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:22:59.23:0,59,1138	0/0:3,0:3:6.02:0,6,133	./.	./.	0/1:9,1:10:60.78:61,0,67	1/1:14,0:12:29.07:400,29,0	0/1:16,0:13:11.65:274,0,12	0/1:33,0:31:24.17:24,0,375	1/1:8,0:7:9.03:166,9,0	0/1:14,0:13:15.09:15,0,625	0/0:11,0:11:12.04:0,12,326	0/0:19,0:15:15.05:0,15,421	0/0:22,0:20:8.95:0,9,227	1/1:2,13:14:6.02:102,6,0	0/0:16,0:16:45.15:0,45,1116	0/0:16,0:14:42.14:0,42,948	0/1:15,0:14:23.52:74,0,24	1/1:4,0:4:4.74:98,5,0	0/1:15,0:12:2.15:2,0,397	0/1:12,0:11:66.62:67,0,291	0/0:6,0:4:9.02:0,9,208	0/0:19,0:17:28.25:0,28,673	0/0:23,0:18:21.44:0,21,424	0/0:21,0:18:12.50:0,13,262	1/1:16,0:15:15.05:272,15,0	0/0:25,0:21:16.28:0,16,1191	0/0:17,0:15:41.61:0,42,1029	0/0:4,0:3:9.03:0,9,239
chr10	53101932	.	GAA	G	780.36	PASS	AB=0.966;AC=16;AF=0.296;AN=54;BaseQRankSum=6.234;DP=405;FS=2.868;HRun=3;HaplotypeScore=86.3867;InbreedingCoeff=0.2454;MQ=42.87;MQ0=34;MQRankSum=-2.749;QD=4.36;ReadPosRankSum=-0.152;VQSLOD=-0.4910;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:22:57.19:0,57,893	0/0:3,0:3:6.02:0,6,99	0/0:1,0:1:3.01:0,3,32	./.	0/1:13,0:12:41.21:41,0,60	1/1:11,2:10:24.01:247,24,0	0/1:10,6:13:9.16:224,0,9	0/1:34,0:32:24.55:25,0,375	1/1:8,0:7:8.99:75,9,0	0/1:14,0:13:15.22:15,0,404	0/0:11,0:11:2.47:0,2,142	0/0:19,0:15:15.04:0,15,215	0/0:24,0:22:9.02:0,9,142	1/1:15,0:14:5.31:25,5,0	0/0:16,0:16:45.15:0,45,773	0/0:15,0:13:39.12:0,39,627	0/1:15,0:13:22.73:56,0,23	0/1:4,0:4:0.69:20,0,1	0/1:18,0:14:1.21:1,0,318	0/1:13,0:10:74.18:74,0,120	0/0:5,0:3:6.02:0,6,112	0/0:19,0:17:27.86:0,28,379	0/0:23,0:18:20.68:0,21,233	0/0:19,0:16:8.15:0,8,116	1/1:15,0:14:14.96:140,15,0	0/0:26,1:23:14.68:0,15,689	0/0:15,0:13:32.74:0,33,556	0/0:4,0:3:9.02:0,9,140
chr10	53101940	.	G	GAA	1211.66	PASS	AB=0.965;AC=24;AF=0.429;AN=56;BaseQRankSum=2.055;DP=425;FS=0.561;HRun=3;HaplotypeScore=90.3837;InbreedingCoeff=-0.0982;MQ=41.68;MQ0=34;MQRankSum=-2.478;QD=3.80;ReadPosRankSum=0.037;VQSLOD=-0.7432;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,2:19:27.11:0,27,578	1/1:2,0:2:3:25,3,0	0/0:6,0:4:9:0,9,105	0/0:7,0:3:7.05:0,7,53	0/0:16,0:14:1.68:0,2,229	0/1:11,0:8:40.57:41,0,75	0/1:16,0:13:62.64:63,0,95	0/1:35,0:33:55.96:216,0,56	0/0:10,0:9:8.93:0,9,63	0/1:16,0:15:9.69:10,0,145	0/1:13,0:13:18.83:24,0,19	1/1:1,18:15:9.03:172,9,0	0/1:1,20:19:0:0,0,0	0/0:17,0:15:8.93:0,9,67	0/1:17,0:17:45.68:46,0,375	0/1:15,0:13:68.15:68,0,316	0/1:17,0:15:6.90:25,0,7	0/0:4,0:4:11.86:0,12,83	0/0:20,0:19:4.50:0,4,206	0/1:14,0:11:12.58:39,0,13	0/0:5,0:3:3.01:0,3,40	1/1:1,19:19:27.47:379,27,0	1/1:4,18:17:9.44:158,9,0	1/1:5,11:15:3.01:57,3,0	0/1:15,0:14:6.41:6,0,66	0/1:27,0:23:13.05:13,0,235	0/1:15,0:13:20.78:21,0,111	0/1:5,0:4:11.12:11,0,48
chr10	53101957	.	AAAGAAAGAAAGAAAGG	A	1137.92	PASS	AB=0.973;AC=14;AF=0.259;AN=54;BaseQRankSum=1.991;DP=388;FS=3.942;HRun=0;HaplotypeScore=144.7575;InbreedingCoeff=-0.3297;MQ=40.09;MQ0=33;MQRankSum=-2.472;QD=6.54;ReadPosRankSum=-3.983;VQSLOD=1.4961;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:23:37.01:0,37,2684	./.	0/0:11,0:6:9.86:0,10,118	0/0:17,0:7:19.59:0,20,667	0/1:15,0:13:25.77:26,0,1291	0/1:11,0:8:0.91:1,0,1084	0/1:18,0:15:22.43:22,0,1102	0/1:16,0:16:37.60:38,0,77	0/0:10,0:9:24.08:0,24,752	0/1:12,0:11:33.94:34,0,272	0/1:12,0:14:36.69:72,0,37	0/0:16,0:12:14.50:0,14,284	0/0:16,0:14:0.47:0,0,1	0/0:18,0:16:18.06:0,18,901	0/0:13,0:13:0.26:0,0,1447	0/0:11,0:9:27.09:0,27,1714	0/1:12,0:10:54.55:55,0,304	0/1:3,0:3:87.17:91,0,87	0/1:6,9:15:99:342,0,142	0/1:10,0:9:54.25:73,0,54	0/1:5,0:3:18.76:44,0,19	0/0:21,0:19:30.14:0,30,811	0/0:21,0:16:19.95:0,20,643	0/0:18,0:15:20.94:0,21,912	0/0:16,0:15:23.96:0,24,797	0/1:22,0:19:99:195,0,271	0/1:12,0:10:36.09:198,0,36	0/1:5,0:4:23.77:94,0,24
chr10	53101970	.	AAGGGAGAG	A	2506.43	PASS	AB=0.946;AC=20;AF=0.370;AN=54;BaseQRankSum=7.565;DP=363;FS=0.631;HRun=0;HaplotypeScore=89.0314;InbreedingCoeff=0.5777;MQ=40.01;MQ0=32;MQRankSum=-7.006;QD=21.61;ReadPosRankSum=-2.104;VQSLOD=2.4374;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:21:17.25:0,17,1805	./.	0/0:17,0:6:15.05:0,15,331	0/0:20,0:7:21.07:0,21,699	0/0:16,0:14:19.43:0,19,978	0/0:11,0:8:18.42:0,18,831	0/1:15,0:14:18.77:19,0,1018	1/1:9,0:9:17.71:321,18,0	0/0:10,0:9:21.01:0,21,535	0/1:8,3:10:19.86:563,0,20	1/1:2,9:11:11.25:182,11,0	0/0:17,0:13:8.50:0,8,182	0/0:15,0:13:6.02:0,6,149	0/0:18,0:16:20.96:0,21,650	0/0:15,0:15:39.13:0,39,1254	0/0:11,0:9:24.08:0,24,1025	0/1:9,0:8:4.73:5,0,27	0/1:3,0:3:8.99:119,0,9	1/1:13,0:13:10.39:240,10,0	1/1:7,1:6:6.02:118,6,0	1/1:4,0:2:3.01:55,3,0	0/0:20,0:18:25.21:0,25,748	0/0:21,0:16:12.62:0,13,508	0/0:17,0:14:21.02:0,21,719	0/0:16,0:15:21.07:0,21,774	1/1:11,11:18:23.41:803,23,0	1/1:7,2:7:10.59:182,11,0	1/1:0,1:1:3.01:86,3,0
chr10	53102020	.	G	GAGGA	2936.21	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=1.672;DP=333;FS=10.210;HRun=0;HaplotypeScore=60.9245;InbreedingCoeff=0.8719;MQ=50.89;MQ0=15;MQRankSum=-5.273;QD=26.69;ReadPosRankSum=-0.714;VQSLOD=2.1831;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:33:0,33,485	0/0:3,0:3:9.01:0,9,121	0/0:17,0:3:6.02:0,6,96	0/0:26,0:10:11.76:0,12,162	0/0:11,0:11:24.08:0,24,400	0/0:14,0:14:36.07:0,36,497	0/0:19,0:19:36.01:0,36,452	1/1:15,0:12:26.95:288,27,0	0/0:8,0:7:18.04:0,18,249	1/1:10,1:11:27.04:490,27,0	1/1:9,1:10:21.01:305,21,0	0/0:13,0:10:27.02:0,27,370	0/0:13,0:12:23.93:0,24,271	0/0:19,0:19:45.02:0,45,557	0/0:13,0:13:32.96:0,33,475	0/0:2,0:2:3.01:0,3,50	1/1:8,1:9:20.97:324,21,0	1/1:2,0:2:6:73,6,0	1/1:9,0:8:5.95:43,6,0	1/1:8,2:10:21.05:367,21,0	1/1:1,5:7:3.01:74,3,0	0/0:11,0:11:24.08:0,24,403	0/0:17,0:16:47.69:0,48,662	0/0:10,0:9:14.96:0,15,197	0/0:11,0:11:24.07:0,24,366	1/1:16,2:18:44.99:750,45,0	1/1:3,9:12:12.04:243,12,0	1/1:2,5:6:9.03:187,9,0
chr10	53103416	.	C	CA	685.70	PASS	AB=1.000;AC=4;AF=0.071;AN=56;BaseQRankSum=0.783;DP=544;FS=0.652;HRun=8;HaplotypeScore=71.4865;InbreedingCoeff=0.3507;MQ=70.21;MQ0=0;MQRankSum=1.050;QD=11.24;ReadPosRankSum=-6.068;VQSLOD=1.2667;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:60.03:0,60,547	0/0:5,0:5:12.01:0,12,110	0/0:17,0:15:24.21:0,24,208	0/0:8,0:8:1.13:0,1,78	0/0:26,0:26:75.03:0,75,683	0/0:19,0:19:51.02:0,51,467	0/0:9,0:9:24.01:0,24,220	1/1:8,23:31:62.69:769,63,0	0/0:14,0:14:42.02:0,42,384	0/0:25,0:25:28.07:0,28,169	0/0:22,0:22:51.22:0,51,218	0/0:19,0:19:45:0,45,408	0/0:19,0:19:54.03:0,54,494	0/0:22,0:22:56.99:0,57,511	0/0:19,0:19:57.03:0,57,522	0/0:22,0:22:57:0,57,512	0/0:16,0:16:35.97:0,36,172	0/0:10,0:10:22.35:0,22,106	0/0:20,0:20:33.13:0,33,125	0/1:26,0:26:16.52:17,0,166	0/0:13,0:13:30.55:0,31,126	0/0:21,1:22:25.40:0,25,482	0/0:21,0:21:51.01:0,51,467	0/0:12,0:12:36.01:0,36,325	0/0:25,0:25:69.03:0,69,629	0/0:30,0:30:0.42:0,0,136	0/0:44,0:44:76.63:0,77,398	0/1:4,0:4:12.32:12,0,27
chr10	53103635	.	C	CT	4772.65	PASS	AB=0.647;AC=20;AF=0.357;AN=56;BaseQRankSum=-9.193;DP=667;FS=15.973;HRun=10;HaplotypeScore=72.4366;InbreedingCoeff=0.8447;MQ=68.03;MQ0=1;MQRankSum=1.166;QD=18.43;ReadPosRankSum=0.087;VQSLOD=4.0288;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:77.85:0,78,634	0/0:8,0:8:17.94:0,18,144	0/0:22,0:17:19.93:0,20,217	0/0:13,0:12:20.41:0,20,150	0/0:27,0:27:65.89:0,66,538	0/0:22,1:24:35.98:0,36,491	0/0:24,0:24:59.88:0,60,489	1/1:10,1:32:66.23:391,66,0	0/0:21,0:21:50.92:0,51,416	1/1:6,20:26:35.44:560,35,0	1/1:6,20:26:35.68:544,36,0	0/0:24,0:27:57.76:0,58,454	0/0:29,0:29:80.90:0,81,665	0/0:26,0:26:62.78:0,63,516	0/0:21,0:21:56.91:0,57,464	0/0:28,0:28:64.92:0,65,519	1/1:3,19:22:39.10:416,39,0	0/1:7,9:16:0.58:199,0,1	1/1:4,11:15:11.43:318,11,0	1/1:4,29:34:58.66:847,59,0	1/1:5,8:13:15.04:160,15,0	0/0:26,0:26:59.88:0,60,489	0/0:28,0:30:64.94:0,65,522	0/0:22,0:22:53.91:0,54,443	0/0:26,0:29:75.01:0,75,581	0/1:16,18:34:48.87:575,0,49	1/1:6,30:36:50.50:730,51,0	1/1:3,1:4:3.01:32,3,0
chr10	53106090	.	CAA	C	1691.98	PASS	AB=0.792;AC=12;AF=0.214;AN=56;BaseQRankSum=2.404;DP=537;FS=0.000;HRun=15;HaplotypeScore=79.1120;InbreedingCoeff=0.7799;MQ=73.86;MQ0=5;MQRankSum=-1.377;QD=10.92;ReadPosRankSum=4.761;VQSLOD=2.5281;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:33.09:0,33,419	0/0:3,0:6:18.05:0,18,216	0/0:45,0:18:21.78:0,22,201	0/1:36,1:22:12.65:13,0,148	1/1:5,20:28:41.85:464,42,0	1/1:3,16:22:44.20:352,44,0	0/1:4,6:11:17.05:147,0,17	0/0:10,0:27:60.08:0,60,616	1/1:3,9:14:26.25:252,26,0	0/0:17,0:20:44.05:0,44,448	0/0:16,0:19:29.55:0,30,474	0/0:7,0:8:21.07:0,21,276	0/0:20,0:21:50.65:0,51,645	1/1:8,8:16:11.72:148,12,0	0/0:13,0:15:36.09:0,36,443	0/0:21,0:21:46.70:0,47,529	0/0:4,0:16:31.44:0,31,179	0/0:6,0:20:18.50:0,18,125	0/0:14,0:15:35.09:0,35,424	0/0:14,1:19:21.81:0,22,549	0/0:6,0:6:18.06:0,18,243	0/0:12,0:14:29.53:0,30,351	0/0:23,0:23:57.16:0,57,732	0/0:12,0:13:21.06:0,21,273	1/1:3,21:27:53.48:497,53,0	0/0:17,0:18:44.58:0,45,515	0/0:26,0:29:69.21:0,69,996	0/0:14,0:14:36.09:0,36,456
chr10	53109912	.	T	TA	931.78	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.766;DP=738;FS=10.151;HRun=1;HaplotypeScore=71.8200;InbreedingCoeff=0.9840;MQ=81.01;MQ0=0;MQRankSum=-0.630;QD=38.82;ReadPosRankSum=-3.452;VQSLOD=2.1410;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,160,2050	0/0:14,0:14:42.09:0,42,526	0/0:29,0:29:78.23:0,78,980	0/0:20,0:20:57.18:0,57,726	0/0:30,0:30:90.28:0,90,1154	0/0:19,0:19:57.19:0,57,740	0/0:37,0:37:99:0,108,1402	1/1:0,24:24:72.22:1027,72,0	0/0:30,0:30:90.26:0,90,1138	0/0:23,0:23:66.20:0,66,843	0/0:20,0:20:57.17:0,57,724	0/0:36,0:36:99:0,102,1324	0/0:34,0:34:99:0,102,1308	0/0:24,0:24:72.23:0,72,934	0/0:38,0:38:99:0,114,1466	0/0:25,0:25:75.24:0,75,973	0/0:29,0:29:84.26:0,84,1074	0/0:10,0:10:30.06:0,30,370	0/0:25,0:25:72.23:0,72,935	0/0:25,0:25:72.19:0,72,916	0/0:41,0:41:99:0,120,1558	0/0:18,0:18:54.14:0,54,670	0/0:21,0:21:63.20:0,63,818	0/0:38,0:38:99:0,111,1439	0/0:21,0:21:63.20:0,63,818	0/0:29,0:29:84.21:0,84,1091	0/0:19,0:19:54.18:0,54,700	0/0:5,0:5:15.05:0,15,195
chr10	53111207	.	C	CCCACCG	396.80	PASS	AB=0.992;AC=6;AF=0.120;AN=50;BaseQRankSum=2.487;DP=490;FS=25.977;HRun=0;HaplotypeScore=123.1932;InbreedingCoeff=-0.0133;MQ=35.11;MQ0=52;MQRankSum=-5.084;QD=2.92;ReadPosRankSum=2.065;VQSLOD=0.4227;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:18:27.09:0,27,625	0/0:5,0:5:6.02:0,6,113	./.	./.	./.	0/0:28,0:25:10.27:0,10,138	0/0:14,0:14:6.29:0,6,71	0/0:30,0:23:64.06:0,64,928	0/0:13,0:13:11.93:0,12,208	0/1:33,0:26:81.22:81,0,850	0/0:18,0:15:8.92:0,9,225	0/0:18,0:18:27.04:0,27,625	0/0:16,0:14:23.57:0,24,482	1/1:17,0:14:0.21:0,0,0	0/0:16,0:15:15.48:0,15,339	0/0:18,0:13:20.78:0,21,428	0/0:18,0:15:39.13:0,39,906	0/0:13,0:10:30.10:0,30,709	0/1:22,0:19:99:170,0,626	0/0:11,5:15:11.43:0,11,196	0/0:25,0:16:11.53:0,12,153	0/0:13,0:11:12.04:0,12,299	0/0:14,0:10:9.48:0,9,169	0/0:12,0:11:11.71:0,12,295	0/0:20,0:15:8.98:0,9,104	0/1:30,0:23:99:105,0,661	0/1:33,0:26:99:146,0,815	0/0:11,0:6:18.06:0,18,377
chr10	53111233	.	CTCTCTG	C	344.22	PASS	AB=0.957;AC=9;AF=0.161;AN=56;BaseQRankSum=5.785;DP=575;FS=1.192;HRun=0;HaplotypeScore=128.2186;InbreedingCoeff=0.4537;MQ=43.44;MQ0=58;MQRankSum=-3.945;QD=2.94;ReadPosRankSum=-2.270;VQSLOD=2.2603;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:22:45.15:0,45,1102	0/0:3,0:3:6.02:0,6,162	0/0:24,0:5:11.89:0,12,132	0/0:47,0:11:3.23:0,3,19	0/0:7,1:8:0:0,0,0	1/1:24,1:23:9.50:172,10,0	0/1:13,1:14:15.58:59,0,16	0/0:42,0:34:84.07:0,84,1537	0/1:14,1:12:8.17:68,0,8	0/1:27,0:20:13.21:13,0,827	0/0:19,0:15:18.06:0,18,464	0/0:20,0:20:33.11:0,33,894	0/0:14,0:13:27.09:0,27,654	1/1:14,1:13:2.15:45,2,0	0/0:22,0:21:32.81:0,33,718	0/0:20,0:16:33.11:0,33,774	0/0:15,0:13:29.20:0,29,551	0/0:13,0:11:20.73:0,21,464	0/0:22,0:14:28.36:0,28,638	0/0:11,0:11:17.79:0,18,460	0/0:27,0:19:29.02:0,29,604	0/0:14,0:12:24.08:0,24,561	0/0:17,0:13:27.04:0,27,557	0/0:17,0:14:21.07:0,21,481	1/1:16,5:18:7.42:124,7,0	0/0:29,0:20:6.31:0,6,737	0/0:34,0:24:40.66:0,41,1075	0/0:14,0:12:33.11:0,33,753
chr10	53111239	.	G	GTCTC	506.07	PASS	AB=0.667;AC=11;AF=0.196;AN=56;BaseQRankSum=5.209;DP=588;FS=8.156;HRun=0;HaplotypeScore=118.0565;InbreedingCoeff=0.7114;MQ=45.02;MQ0=59;MQRankSum=-2.706;QD=5.56;ReadPosRankSum=-2.663;VQSLOD=1.1841;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:21:48.14:0,48,775	0/0:4,0:4:6.02:0,6,106	0/0:37,0:8:11.40:0,11,123	0/0:65,0:15:2.36:0,2,40	0/1:4,4:8:0:0,0,0	1/1:14,9:22:9.03:217,9,0	1/1:9,2:11:3.01:72,3,0	0/0:41,0:33:72.01:0,72,1087	1/1:4,5:9:6.49:114,6,0	0/0:29,0:22:36.56:0,37,679	0/0:20,0:16:18.06:0,18,298	0/0:20,0:20:33.11:0,33,561	0/0:13,0:12:27.09:0,27,458	1/1:9,5:12:3.01:76,3,0	0/0:22,0:21:11.70:0,12,545	0/0:20,0:16:36:0,36,593	0/0:15,0:13:21.07:0,21,341	0/0:12,0:11:1.68:0,2,266	0/0:21,0:13:30.10:0,30,516	0/0:10,0:10:18:0,18,318	0/0:27,0:20:29.90:0,30,452	0/0:12,0:10:24.08:0,24,422	0/0:21,0:17:33.01:0,33,465	0/0:18,0:15:23.96:0,24,370	1/1:18,5:19:9.02:168,9,0	0/0:23,0:16:28.12:0,28,479	0/0:28,0:18:25.76:0,26,640	0/0:14,0:12:33.11:0,33,569
chr10	53111260	.	TTC	T	810.58	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=7.740;DP=620;FS=35.126;HRun=0;HaplotypeScore=99.8269;InbreedingCoeff=0.9397;MQ=54.73;MQ0=51;MQRankSum=-6.218;QD=12.28;ReadPosRankSum=-3.729;VQSLOD=1.1025;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:22:54.89:0,55,991	0/0:6,0:6:18.06:0,18,308	0/0:61,0:14:16.51:0,17,248	0/0:117,0:30:34.44:0,34,396	1/1:3,7:7:2.85:19,3,0	1/1:0,17:14:23.99:266,24,0	1/1:1,4:5:8.92:74,9,0	0/0:41,0:32:72.24:0,72,1201	1/1:2,7:7:17.92:179,18,0	0/0:23,0:19:48.15:0,48,800	0/0:15,0:12:30.09:0,30,446	0/0:20,0:20:44.89:0,45,684	0/0:19,0:19:57.19:0,57,890	1/1:0,9:7:14.90:121,15,0	0/0:23,0:23:60.20:0,60,975	0/0:16,0:15:42.05:0,42,673	0/0:18,0:16:36.12:0,36,584	0/0:9,0:9:27.09:0,27,437	0/0:23,0:18:50.65:0,51,782	0/0:11,0:10:24.08:0,24,406	0/0:24,0:20:42.11:0,42,668	0/0:14,0:13:36.11:0,36,567	0/0:23,0:19:50.38:0,50,819	0/0:15,0:14:27.09:0,27,437	1/1:3,13:15:35.82:327,36,0	0/0:17,0:11:32.69:0,33,489	0/0:19,0:13:33.11:0,33,544	0/0:14,0:14:36.11:0,36,591
chr10	53111471	.	G	GTC	53.22	PASS	AC=8;AF=0.267;AN=30;BaseQRankSum=3.630;DP=609;FS=7.155;HRun=0;HaplotypeScore=61.4605;InbreedingCoeff=0.7219;MQ=36.75;MQ0=144;MQRankSum=-3.773;QD=1.66;ReadPosRankSum=-1.322;VQSLOD=0.3506;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:22:56.80:0,57,703	0/0:9,0:9:27.09:0,27,351	0/0:129,0:12:17.79:0,18,198	0/0:141,0:11:18.83:0,19,215	./.	./.	./.	./.	./.	1/1:6,1:4:3.01:50,3,0	./.	0/0:23,2:21:57.15:0,57,718	0/0:13,1:13:27.82:0,28,386	./.	0/0:35,3:33:93.23:0,93,1167	0/0:28,1:26:75.13:0,75,919	./.	1/1:2,0:2:0.89:2,1,0	./.	1/1:4,7:4:3.01:51,3,0	./.	0/0:23,2:23:57.18:0,57,727	0/0:26,0:24:66.21:0,66,857	0/0:37,0:36:84.21:0,84,1049	./.	./.	1/1:2,10:1:3.01:51,3,0	./.
chr10	53111518	.	G	GTC	1077.01	PASS	AC=24;AF=0.571;AN=42;BaseQRankSum=-1.001;DP=701;FS=7.202;HRun=0;HaplotypeScore=57.8079;InbreedingCoeff=0.7305;MQ=25.92;MQ0=361;MQRankSum=-7.128;QD=8.41;ReadPosRankSum=-1.446;VQSLOD=1.5310;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:23:33.05:0,33,391	0/0:10,0:9:23.88:0,24,271	./.	./.	./.	1/1:1,5:5:3.01:36,3,0	1/1:2,9:3:5.95:54,6,0	./.	1/1:0,8:7:3.01:51,3,0	1/1:4,13:9:18.06:306,18,0	./.	0/0:29,0:26:36.12:0,36,467	0/0:25,0:20:30.02:0,30,347	1/1:0,10:6:3.01:51,3,0	0/0:52,0:42:62.99:0,63,708	0/0:37,0:33:39.13:0,39,503	./.	./.	1/1:3,3:2:6.02:102,6,0	1/1:5,4:4:6.02:65,6,0	1/1:4,4:2:2.74:12,3,0	0/0:31,0:25:33.02:0,33,384	0/0:29,0:22:27.03:0,27,310	0/0:39,0:26:36.01:0,36,410	1/1:5,5:3:6.02:102,6,0	1/1:5,20:10:24.08:408,24,0	1/1:4,7:6:3.01:44,3,0	1/1:4,3:1:2.68:11,3,0
chr10	53111606	.	GTC	G	196.43	PASS	AB=0.844;AC=2;AF=0.040;AN=50;BaseQRankSum=3.287;DP=689;FS=1.358;HRun=0;HaplotypeScore=71.8485;InbreedingCoeff=-0.0988;MQ=26.23;MQ0=294;MQRankSum=-1.789;QD=3.57;ReadPosRankSum=2.131;VQSLOD=1.6405;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:23,19:33:99:265,0,168	0/0:12,0:12:30.03:0,30,448	./.	./.	0/0:9,0:2:3.01:0,3,51	0/0:8,0:6:3.01:0,3,51	./.	0/0:27,0:8:24.06:0,24,362	0/0:10,0:7:3.01:0,3,51	0/0:14,0:8:11.84:0,12,106	0/0:10,0:8:3.01:0,3,51	0/0:28,0:25:21.03:0,21,316	0/0:38,0:34:35.87:0,36,537	0/0:10,0:7:5.95:0,6,44	0/0:48,0:39:36.10:0,36,569	0/0:49,0:43:48.05:0,48,693	0/0:13,0:6:6.02:0,6,87	0/0:11,0:5:9.03:0,9,138	0/0:10,0:4:9.03:0,9,148	0/0:9,0:5:15.05:0,15,242	0/0:16,0:7:8.99:0,9,122	0/0:24,0:16:27.08:0,27,431	0/0:26,0:16:6.02:0,6,97	0/0:73,0:40:35.96:0,36,608	0/0:8,0:5:9.03:0,9,153	0/0:21,0:12:32.94:0,33,492	0/0:17,0:10:15.05:0,15,241	0/1:13,0:7:16.73:17,0,112
chr10	53111748	.	C	CCT	560.55	PASS	AB=0.653;AC=10;AF=0.294;AN=34;BaseQRankSum=1.291;DP=625;FS=19.531;HRun=0;HaplotypeScore=55.1334;InbreedingCoeff=0.6226;MQ=34.18;MQ0=183;MQRankSum=-1.760;QD=10.58;ReadPosRankSum=-0.572;VQSLOD=1.0462;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:46:36.12:0,36,467	0/0:10,0:10:27.09:0,27,352	./.	./.	./.	1/1:0,1:1:3.01:51,3,0	./.	./.	./.	./.	./.	0/0:39,0:36:51.15:0,51,667	0/0:43,0:40:33.11:0,33,428	0/0:3,8:9:0:0,0,0	0/0:46,0:43:42.14:0,42,550	0/0:37,0:37:24.08:0,24,310	1/1:5,12:14:12.04:198,12,0	1/1:3,10:8:6.02:103,6,0	1/1:4,1:4:3.01:51,3,0	./.	./.	0/0:26,0:24:30.09:0,30,393	0/0:26,0:25:36.12:0,36,464	0/0:52,0:47:54.09:0,54,691	./.	0/1:2,8:8:17.75:276,0,18	0/0:4,5:8:9.03:0,9,116	0/1:4,2:5:0:0,0,0
chr10	53111811	.	T	TG	50.02	PASS	AB=0.966;AC=11;AF=0.220;AN=50;BaseQRankSum=4.389;DP=807;FS=1.400;HRun=0;HaplotypeScore=56.8977;InbreedingCoeff=0.0078;MQ=37.21;MQ0=192;MQRankSum=-2.927;QD=0.31;ReadPosRankSum=-0.899;VQSLOD=1.4695;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:59,0:49:48.62:0,49,654	0/0:11,0:11:19.31:0,19,255	0/0:71,0:2:3.01:0,3,32	0/0:111,3:5:7.82:0,8,48	0/1:6,1:4:0:0,0,0	0/0:16,1:10:2.54:0,3,42	0/1:26,0:10:13.95:14,0,36	0/0:26,0:7:21.07:0,21,293	0/1:20,0:14:32.16:32,0,36	0/1:16,1:12:11.78:12,0,368	0/1:10,0:6:0:0,0,0	0/0:34,0:32:54.18:0,54,755	0/0:39,0:36:63.21:0,63,877	1/1:20,3:16:3.01:42,3,0	0/0:42,0:39:63.21:0,63,881	0/0:34,0:33:51.13:0,51,691	0/0:16,0:12:2.98:0,3,22	0/1:15,0:8:6.28:6,0,114	0/1:10,0:5:30.15:30,0,75	./.	0/1:13,0:8:7.79:8,0,40	0/0:31,0:27:42.11:0,42,566	0/0:44,0:42:71.84:0,72,983	0/0:53,0:47:51:0,51,711	./.	0/0:30,0:19:57.19:0,57,797	0/1:18,1:13:29.24:29,0,37	./.
chr10	53112130	.	G	GTC	3072.83	PASS	AC=30;AF=0.600;AN=50;BaseQRankSum=-3.516;DP=670;FS=1.337;HRun=0;HaplotypeScore=63.0930;InbreedingCoeff=0.8512;MQ=29.31;MQ0=316;MQRankSum=-2.533;QD=12.65;ReadPosRankSum=-2.088;VQSLOD=3.1171;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:20:35.92:0,36,374	./.	./.	./.	1/1:0,18:10:4.17:34,4,0	1/1:5,18:14:15.05:255,15,0	1/1:7,12:16:11.97:133,12,0	1/1:13,9:4:6.02:101,6,0	1/1:4,7:10:9.03:138,9,0	1/1:4,11:13:27.07:447,27,0	1/1:4,10:8:9.03:119,9,0	0/0:17,0:15:36.07:0,36,447	0/0:20,0:17:33.04:0,33,392	1/1:2,10:11:9.03:139,9,0	0/0:13,0:11:17.98:0,18,197	0/0:15,0:12:18.04:0,18,219	0/0:17,0:13:7.22:0,7,292	0/0:18,0:13:19.16:0,19,252	1/1:4,3:7:9.03:150,9,0	1/1:7,13:11:12.04:173,12,0	1/1:1,12:10:12.04:204,12,0	0/0:20,0:12:15.05:0,15,195	0/0:19,0:10:15.05:0,15,192	0/0:16,0:12:18.06:0,18,232	1/1:2,13:11:6.02:87,6,0	1/1:3,25:24:54.16:861,54,0	1/1:6,13:15:21.05:329,21,0	1/1:0,4:4:6.02:102,6,0
chr10	53112360	.	C	CCT	233.70	PASS	AB=1.000;AC=16;AF=0.533;AN=30;BaseQRankSum=-1.087;DP=312;FS=10.544;HRun=0;HaplotypeScore=51.2773;InbreedingCoeff=0.1762;MQ=75.82;MQ0=52;MQRankSum=-0.613;QD=1.37;ReadPosRankSum=-1.048;VQSLOD=-0.3338;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:104,0:21:11.12:0,11,109	0/1:144,0:29:17.47:17,0,77	1/1:1,2:2:2.77:18,3,0	0/0:2,1:2:3.01:0,3,39	0/1:1,0:1:0:0,0,0	./.	0/0:1,1:2:3.01:0,3,39	0/1:2,0:2:31.01:44,0,31	./.	./.	./.	./.	1/1:0,1:1:3.01:51,3,0	./.	./.	./.	./.	1/1:1,1:2:3.01:51,3,0	./.	1/1:9,1:4:3.01:51,3,0	0/0:6,1:3:2.99:0,3,39	0/1:1,0:1:0:0,0,0	0/0:2,2:3:1.06:0,1,30	1/1:1,3:1:3.01:51,3,0	./.	1/1:1,1:2:3.01:51,3,0
chr10	53112592	.	T	TTC	1394.50	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=1.377;DP=572;FS=16.522;HRun=0;HaplotypeScore=95.1753;InbreedingCoeff=0.8930;MQ=52.30;MQ0=71;MQRankSum=-0.038;QD=20.81;ReadPosRankSum=1.631;VQSLOD=2.8923;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:22:35.87:0,36,457	0/0:11,0:6:12.04:0,12,149	0/0:66,0:9:8.90:0,9,76	0/0:109,0:18:5.13:0,5,32	1/1:1,12:9:9.03:150,9,0	1/1:0,12:11:12.04:201,12,0	1/1:0,12:11:27.09:420,27,0	0/0:17,0:15:42.07:0,42,512	1/1:0,7:7:15.05:250,15,0	0/0:25,0:18:51.16:0,51,653	0/0:17,0:14:21.07:0,21,267	0/0:13,0:10:18.06:0,18,228	0/0:18,0:13:21.07:0,21,267	1/1:0,6:6:12.04:200,12,0	0/0:22,0:19:42.13:0,42,534	0/0:17,0:12:24.08:0,24,302	0/0:16,0:16:48.05:0,48,557	0/0:7,0:6:18.06:0,18,225	0/0:10,0:8:24.08:0,24,304	0/0:16,0:10:15.01:0,15,172	0/0:20,0:20:18.04:0,18,229	0/0:15,0:11:14.99:0,15,158	0/0:18,0:16:39.09:0,39,472	0/0:29,0:25:63.18:0,63,783	1/1:5,12:10:21.07:351,21,0	0/0:15,0:13:36.10:0,36,445	0/0:14,0:10:15.05:0,15,191	0/0:2,0:2:6.02:0,6,76
chr10	53112630	.	CTCTCTCTCTG	C	1379.46	PASS	AC=18;AF=0.375;AN=48;BaseQRankSum=4.801;DP=606;FS=5.990;HRun=0;HaplotypeScore=130.4655;InbreedingCoeff=0.7934;MQ=34.71;MQ0=72;MQRankSum=-0.221;QD=12.00;ReadPosRankSum=0.020;VQSLOD=2.0835;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:27:42.10:0,42,1563	0/0:10,0:6:15.05:0,15,601	0/0:49,0:6:18.06:0,18,369	0/0:94,0:10:17.75:0,18,257	./.	1/1:10,0:8:2.98:21,3,0	0/0:9,0:8:1.25:0,1,3	0/0:42,0:21:42.14:0,42,1262	1/1:9,0:8:3.01:55,3,0	1/1:21,0:17:21.07:413,21,0	1/1:11,0:9:9.50:146,10,0	0/0:13,0:10:15.05:0,15,571	0/0:25,0:16:21.07:0,21,720	./.	0/0:26,0:23:36.12:0,36,1143	0/0:24,0:18:24.08:0,24,864	0/0:17,0:16:27.09:0,27,980	0/0:10,0:7:15.05:0,15,562	1/1:8,1:7:3.01:76,3,0	./.	1/1:22,0:21:17.89:341,18,0	0/0:22,0:16:21.07:0,21,572	0/0:27,0:23:33.11:0,33,1002	0/0:43,0:38:68.63:0,69,2490	1/1:14,0:8:3.01:42,3,0	1/1:9,8:14:18.06:390,18,0	./.	1/1:2,0:2:3.01:67,3,0
chr10	53112649	.	TG	T	701.18	PASS	AB=0.591;AC=13;AF=0.271;AN=48;BaseQRankSum=3.846;DP=507;FS=0.000;HRun=1;HaplotypeScore=59.9280;InbreedingCoeff=0.6296;MQ=30.67;MQ0=149;MQRankSum=0.350;QD=11.49;ReadPosRankSum=-4.669;VQSLOD=-0.0885;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:22:44.87:0,45,689	0/0:10,0:6:15.05:0,15,239	0/0:66,0:6:18.04:0,18,228	0/0:103,1:8:18.01:0,18,191	./.	1/1:3,1:2:2.98:21,3,0	./.	0/0:25,0:14:42.14:0,42,672	0/0:5,0:4:3.01:0,3,38	0/1:4,9:8:23.66:266,0,24	1/1:2,6:4:9.03:125,9,0	0/0:10,0:7:18.06:0,18,285	0/0:19,0:10:21.07:0,21,332	./.	0/0:20,0:17:36.12:0,36,574	0/0:19,0:13:24.08:0,24,382	0/0:12,0:12:30.10:0,30,478	0/0:10,0:6:15.05:0,15,231	0/0:8,0:2:5.51:0,6,51	./.	1/1:5,11:15:4.96:174,5,0	0/0:19,0:13:21.07:0,21,331	0/0:20,0:16:32.99:0,33,513	0/0:36,0:32:69.08:0,69,1101	1/1:7,1:2:3.01:42,3,0	1/1:11,0:8:10.93:180,11,0	0/0:10,1:7:3.01:0,3,45	1/1:0,1:1:3.01:42,3,0
chr10	53112732	.	GTC	G	117.44	PASS	AB=0.994;AC=7;AF=0.194;AN=36;BaseQRankSum=3.681;DP=343;FS=15.115;HRun=0;HaplotypeScore=66.5609;InbreedingCoeff=0.2437;MQ=50.54;MQ0=103;MQRankSum=0.873;QD=0.50;ReadPosRankSum=-1.482;VQSLOD=0.1963;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:18.05:0,18,226	./.	0/1:91,0:13:24.06:24,0,182	0/1:117,0:14:3.09:3,0,31	./.	./.	./.	0/0:15,0:6:18.06:0,18,291	1/1:1,6:6:12.04:152,12,0	0/0:3,0:2:6.02:0,6,102	./.	0/0:2,0:2:3.01:0,3,35	0/0:7,0:7:18.06:0,18,230	1/1:0,4:4:3.01:39,3,0	0/0:8,0:8:11.42:0,11,201	0/0:4,0:4:9.03:0,9,151	0/0:4,0:4:6.02:0,6,88	0/0:5,0:3:6.02:0,6,86	0/0:8,0:5:12.04:0,12,203	./.	0/1:12,0:6:8.04:8,0,29	./.	./.	0/0:12,0:12:9.03:0,9,119	./.	0/0:3,0:2:6.02:0,6,74	0/0:6,0:5:6.02:0,6,89	./.
chr10	53112842	.	CTG	C	95.34	PASS	AB=1.000;AC=14;AF=0.467;AN=30;BaseQRankSum=0.257;DP=201;FS=2.019;HRun=0;HaplotypeScore=38.3363;InbreedingCoeff=0.3409;MQ=65.53;MQ0=21;MQRankSum=-0.802;QD=2.44;ReadPosRankSum=-0.741;VQSLOD=1.2287;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:2,1:3:3.93:11,4,0	./.	0/0:29,0:7:10.84:0,11,73	0/0:59,0:12:0.85:0,1,13	./.	1/1:6,2:4:9:85,9,0	1/1:11,0:7:2.99:24,3,0	./.	./.	0/1:3,0:3:11.76:22,0,12	./.	0/0:7,0:6:3.01:0,3,33	0/0:4,0:3:6.02:0,6,66	./.	0/0:8,0:8:12.03:0,12,132	0/0:7,0:5:6.02:0,6,66	1/1:2,0:3:5.55:26,6,0	1/1:1,1:2:2.98:22,3,0	./.	./.	./.	./.	./.	1/1:4,1:5:0.91:14,1,0	./.	0/1:4,0:4:7.06:7,0,53	0/0:10,0:9:9.02:0,9,98	./.
chr10	53112856	.	G	GTC	129.12	PASS	AB=1.000;AC=15;AF=0.500;AN=30;BaseQRankSum=-1.603;DP=203;FS=0.000;HRun=0;HaplotypeScore=33.2220;InbreedingCoeff=0.3171;MQ=59.10;MQ0=63;MQRankSum=-0.534;QD=1.79;ReadPosRankSum=1.536;VQSLOD=0.3963;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:1,0:1:3.01:0,3,32	./.	0/1:33,0:5:16.61:17,0,51	0/0:77,0:11:2.74:0,3,13	./.	1/1:5,0:1:2.60:10,3,0	1/1:9,0:4:3.01:32,3,0	./.	./.	1/1:1,0:1:3.01:50,3,0	0/1:2,0:2:0:0,0,0	0/0:2,0:2:2.97:0,3,20	0/0:2,0:2:5.93:0,6,40	./.	0/0:5,0:4:11.89:0,12,81	0/0:4,0:4:2.97:0,3,20	1/1:4,0:1:2.60:10,3,0	./.	./.	./.	./.	./.	./.	0/1:4,0:4:0:0,0,0	./.	1/1:3,0:3:5.98:64,6,0	1/1:3,6:9:3.01:51,3,0	./.
chr10	53114889	.	TC	T	96.19	PASS	AC=8;AF=0.80;AN=10;BaseQRankSum=0.742;DP=71;FS=0.000;HRun=2;HaplotypeScore=9.7717;MQ=10.93;MQ0=56;MQRankSum=-0.742;QD=4.18;ReadPosRankSum=-0.742;VQSLOD=0.0928;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	./.	1/1:4,1:1:2.96:19,3,0	./.	./.	./.	./.	./.	1/1:2,1:2:3.01:38,3,0	./.	./.	./.	./.	1/1:8,2:2:6.02:77,6,0	./.	./.	./.	./.	./.	./.	1/1:3,2:2:5.88:36,6,0	./.	0/0:2,0:1:2.90:0,3,16	./.	./.
chr10	53115782	.	TCTCTCTCTTCTCTCTCTGTCTCTCTCTGTGTGACTCTCTCTC	T	474.06	PASS	AB=0.688;AC=9;AF=0.225;AN=40;BaseQRankSum=4.433;DP=536;FS=19.664;HRun=0;HaplotypeScore=256.8774;InbreedingCoeff=0.7036;MQ=45.96;MQ0=174;MQRankSum=-2.552;QD=10.77;ReadPosRankSum=-0.934;VQSLOD=0.8418;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:21:27.16:0,27,3003	0/0:6,0:5:8.75:0,9,668	0/0:67,0:6:11.84:0,12,218	0/0:130,0:11:25.85:0,26,420	./.	./.	./.	0/0:23,0:15:39.13:0,39,1840	./.	1/1:11,15:18:9.03:177,9,0	0/1:6,5:11:0:0,0,0	0/0:29,0:24:57.19:0,57,3726	0/0:22,0:17:15.12:0,15,2305	1/1:3,0:3:3.01:179,3,0	0/0:19,0:17:21.14:0,21,2393	0/0:16,0:15:36.12:0,36,2885	0/0:19,0:18:51.18:0,51,3447	0/0:9,0:8:21.07:0,21,1313	./.	./.	1/1:2,0:2:3.01:52,3,0	0/0:30,0:29:66.23:0,66,4644	0/0:13,0:11:27.09:0,27,2032	0/0:19,0:19:44.91:0,45,3918	./.	./.	0/0:9,0:2:2.22:0,2,7	1/1:2,0:1:3.01:182,3,0
chr10	53115809	.	TGTGTG	T	44.16	PASS	AB=1.000;AC=5;AF=0.147;AN=34;BaseQRankSum=3.458;DP=546;FS=2.034;HRun=0;HaplotypeScore=108.6371;InbreedingCoeff=0.7106;MQ=62.84;MQ0=58;MQRankSum=-0.409;QD=2.21;ReadPosRankSum=-0.812;VQSLOD=1.8086;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:22:51.18:0,51,1667	0/0:3,0:3:9.03:0,9,299	0/0:95,0:24:39.99:0,40,929	0/0:126,0:16:26.71:0,27,511	./.	./.	./.	0/0:33,0:28:75.26:0,75,2381	./.	0/1:16,0:14:0:0,0,0	./.	0/0:27,0:22:66.23:0,66,2138	0/0:22,0:18:51.13:0,51,1575	1/1:0,3:2:3.01:67,3,0	0/0:30,0:27:51.18:0,51,1693	0/0:20,0:19:51.18:0,51,1655	0/0:24,0:23:66.23:0,66,2059	0/0:13,0:11:27.09:0,27,875	./.	./.	./.	0/0:31,0:31:81.28:0,81,2635	0/0:22,0:22:54.19:0,54,1766	0/0:22,0:21:53.94:0,54,1789	./.	./.	./.	1/1:0,1:1:3.01:67,3,0
chr10	53115902	.	T	TG	69.12	PASS	AB=0.724;AC=12;AF=0.231;AN=52;BaseQRankSum=4.655;DP=500;FS=10.556;HRun=0;HaplotypeScore=61.2307;InbreedingCoeff=0.0085;MQ=44.68;MQ0=95;MQRankSum=-3.732;QD=0.56;ReadPosRankSum=-0.384;VQSLOD=0.2151;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:8:20.96:0,21,249	0/0:2,0:1:6.02:0,6,84	0/0:88,0:9:9.09:0,9,64	0/0:120,1:12:26.44:0,26,275	1/1:14,2:13:2.48:10,2,0	0/1:3,2:5:12.58:30,0,13	0/1:16,3:19:2.97:3,0,322	0/0:21,0:18:51.14:0,51,692	0/0:8,2:4:5.99:0,6,63	0/1:12,2:9:29.85:30,0,224	0/0:5,3:7:4.15:0,4,23	0/0:9,1:7:9.03:0,9,126	0/0:10,0:8:12.04:0,12,167	0/1:4,4:7:4.29:4,0,16	0/0:9,1:8:5.97:0,6,63	0/0:9,1:8:18.02:0,18,230	0/0:11,0:9:2.97:0,3,213	0/1:2,1:3:38.75:39,0,74	0/0:17,0:6:18.05:0,18,234	0/1:11,3:10:3.44:3,0,151	./.	0/0:8,1:7:9.02:0,9,109	0/0:11,0:10:26.95:0,27,278	0/0:11,0:9:13.59:0,14,171	0/1:2,2:5:1.21:1,0,39	0/1:10,5:10:39.90:40,0,305	1/1:7,3:2:3.01:34,3,0	./.
chr10	53115914	.	G	GTC	332.44	PASS	AB=0.902;AC=15;AF=0.357;AN=42;BaseQRankSum=3.497;DP=505;FS=4.373;HRun=0;HaplotypeScore=55.9585;InbreedingCoeff=0.0682;MQ=32.29;MQ0=153;MQRankSum=-1.017;QD=1.54;ReadPosRankSum=3.129;VQSLOD=0.8701;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:7:2.77:0,3,38	./.	1/1:87,0:4:0.47:1,0,0	./.	0/0:15,0:12:1.55:0,2,4	1/1:9,0:5:4.26:50,4,0	1/1:21,0:16:10.93:99,11,0	0/0:26,0:20:38.94:0,39,452	./.	0/1:12,2:7:25.98:68,0,26	0/0:4,4:7:0:0,0,0	./.	0/0:9,0:5:2.98:0,3,22	0/0:13,0:7:1.55:0,2,4	0/0:14,0:9:3.88:0,4,27	0/0:15,0:12:6.02:0,6,73	0/1:14,0:8:15.77:16,0,48	0/0:3,0:2:3.01:0,3,38	0/1:11,2:3:10.98:11,0,50	0/1:13,3:12:57.93:58,0,94	./.	0/1:9,0:4:0:0,0,0	./.	0/0:12,0:8:2.37:0,2,8	0/1:3,0:3:0.79:10,0,1	0/1:10,6:9:86.26:86,0,101	1/1:10,3:2:3.01:50,3,0	./.
chr10	53115919	.	T	TCG	151.83	PASS	AB=0.928;AC=8;AF=0.174;AN=46;BaseQRankSum=4.147;DP=513;FS=10.365;HRun=0;HaplotypeScore=50.4326;InbreedingCoeff=0.0524;MQ=22.12;MQ0=173;MQRankSum=-1.116;QD=1.50;ReadPosRankSum=4.264;VQSLOD=-0.3090;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:8:2.77:0,3,46	./.	0/0:85,0:1:0.47:0,0,1	./.	0/0:11,5:12:1.55:0,2,4	0/1:7,2:5:15.72:49,0,16	0/1:14,7:14:3.74:98,0,4	0/0:28,0:21:60.11:0,60,767	./.	0/1:13,0:6:23.65:24,0,89	0/0:8,0:7:0:0,0,0	0/0:9,0:5:0:0,0,0	0/0:9,0:4:6.01:0,6,68	0/0:8,4:6:1.55:0,2,4	0/0:19,0:14:3.90:0,4,47	0/0:18,0:15:11.98:0,12,136	0/0:11,0:5:3.06:0,3,78	0/0:3,0:2:3.01:0,3,46	0/0:12,0:3:6.02:0,6,89	0/1:17,0:13:20.20:20,0,122	./.	0/1:10,0:5:0:0,0,0	0/0:8,0:4:2.97:0,3,20	0/0:14,0:7:2.37:0,2,8	0/0:1,2:3:3.69:0,4,9	0/1:19,0:9:36.35:36,0,190	1/1:12,0:1:3.01:30,3,0	./.
chr10	53116006	.	GTC	G	813.75	PASS	AB=0.993;AC=14;AF=0.259;AN=54;BaseQRankSum=5.593;DP=742;FS=13.361;HRun=0;HaplotypeScore=50.4105;InbreedingCoeff=0.5842;MQ=44.24;MQ0=139;MQRankSum=3.401;QD=4.03;ReadPosRankSum=1.859;VQSLOD=0.6565;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:30:9.03:0,9,153	0/0:9,0:9:18.06:0,18,306	0/1:67,1:7:41.11:41,0,48	0/0:112,0:9:5.18:0,5,37	1/1:4,24:22:33.11:429,33,0	1/1:3,16:10:6.02:78,6,0	1/1:3,15:13:3.01:34,3,0	0/0:25,0:14:36.10:0,36,540	1/1:1,12:7:3.01:39,3,0	0/0:35,0:18:54.18:0,54,904	0/0:15,0:12:21.06:0,21,327	0/0:17,0:15:17.81:0,18,306	0/0:21,0:19:21.05:0,21,327	1/1:1,23:17:6.02:78,6,0	0/0:19,0:17:12.04:0,12,204	0/0:22,0:20:12.04:0,12,202	0/0:24,0:15:4.83:0,5,56	0/1:20,0:15:2.37:2,0,45	0/0:21,0:13:30.10:0,30,500	0/0:19,0:18:33.01:0,33,547	0/0:35,0:22:2.65:0,3,50	0/0:21,0:19:48.15:0,48,773	0/0:20,0:18:39.13:0,39,634	0/0:29,0:22:3.01:0,3,41	1/1:6,6:10:21.07:272,21,0	0/0:37,0:26:78.24:0,78,1273	0/0:20,0:7:6.02:0,6,97	./.
chr10	53116108	.	GTC	G	628.41	PASS	AB=1.000;AC=16;AF=0.286;AN=56;BaseQRankSum=7.095;DP=619;FS=3.172;HRun=0;HaplotypeScore=71.8629;InbreedingCoeff=0.7393;MQ=42.24;MQ0=56;MQRankSum=-6.731;QD=4.80;ReadPosRankSum=-0.134;VQSLOD=2.5359;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:30:23.25:0,23,354	0/0:7,0:7:15.05:0,15,239	0/1:24,0:1:0:0,0,0	0/0:68,1:6:3.48:0,3,45	1/1:18,2:12:2.89:38,3,0	1/1:10,5:12:21:207,21,0	1/1:9,6:8:11.97:128,12,0	1/1:6,7:3:9:99,9,0	1/1:5,2:4:5.98:52,6,0	0/0:34,0:21:54.11:0,54,836	0/0:21,0:19:30.07:0,30,457	0/0:12,0:10:12.04:0,12,204	0/0:10,0:10:15.05:0,15,243	1/1:8,2:5:8.89:78,9,0	0/0:22,0:22:30.10:0,30,510	0/0:18,0:17:30.10:0,30,502	0/0:24,0:19:19.83:0,20,262	0/0:18,0:15:12.04:0,12,198	0/0:23,0:14:39.13:0,39,656	0/0:30,0:25:24.07:0,24,382	0/0:26,0:24:7.73:0,8,115	0/0:29,0:29:69.19:0,69,1072	0/0:28,0:27:60.18:0,60,988	0/0:34,0:29:24.06:0,24,381	1/1:12,2:13:18.02:189,18,0	0/0:35,0:26:66.18:0,66,1014	0/1:13,0:7:13.72:14,0,93	0/0:13,0:9:6.91:0,7,104
chr10	53116130	.	G	GTC	4624.77	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-2.135;DP=644;FS=0.000;HRun=0;HaplotypeScore=72.4954;InbreedingCoeff=0.8691;MQ=38.06;MQ0=75;MQRankSum=-1.299;QD=17.45;ReadPosRankSum=-1.134;VQSLOD=4.2472;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:24:16.84:0,17,199	0/0:7,0:7:9.03:0,9,117	0/0:35,0:1:0:0,0,0	0/0:76,0:5:5.85:0,6,75	1/1:17,2:10:5.93:68,6,0	1/1:12,6:13:20.71:232,21,0	1/1:13,4:10:14.85:182,15,0	0/0:27,0:12:36.12:0,36,465	1/1:6,3:6:12.03:165,12,0	1/1:8,24:21:45.12:726,45,0	1/1:5,18:20:30.10:510,30,0	0/0:11,0:10:12.04:0,12,156	0/0:17,0:13:12.04:0,12,156	1/1:14,2:10:14.40:189,14,0	0/0:25,0:25:30.10:0,30,389	0/0:20,0:17:30.02:0,30,369	0/0:22,0:17:15.05:0,15,193	0/0:17,0:15:9.03:0,9,117	1/1:6,15:14:42.10:678,42,0	1/1:3,20:22:21.07:345,21,0	1/1:3,16:17:5.71:87,6,0	0/0:21,0:21:44.98:0,45,559	0/0:28,0:27:53.95:0,54,699	0/0:39,0:31:21.07:0,21,273	1/1:11,3:13:21.01:263,21,0	1/1:8,21:20:54.18:891,54,0	1/1:2,13:10:14.94:237,15,0	1/1:2,6:5:3.90:53,4,0
chr10	53116197	.	GTC	G	375.93	PASS	AB=0.921;AC=20;AF=0.417;AN=48;BaseQRankSum=3.539;DP=637;FS=16.163;HRun=0;HaplotypeScore=103.1645;InbreedingCoeff=0.3563;MQ=26.82;MQ0=191;MQRankSum=-2.574;QD=1.49;ReadPosRankSum=3.140;VQSLOD=1.0195;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:21:6.02:0,6,100	0/0:8,0:7:9.03:0,9,150	./.	./.	1/1:3,14:15:2.90:34,3,0	1/1:20,9:19:3.01:34,3,0	0/1:15,5:14:0:0,0,0	1/1:10,5:6:9.50:102,9,0	1/1:10,5:13:12.91:134,13,0	0/1:25,0:19:1.37:63,0,1	./.	0/0:15,0:13:6.47:0,6,70	0/0:19,0:13:9.02:0,9,124	0/1:15,9:15:11.98:32,0,12	0/0:19,0:17:3.01:0,3,43	0/0:23,0:16:15.02:0,15,198	0/0:23,0:17:20.93:0,21,237	0/0:14,0:4:3.01:0,3,41	0/1:21,0:15:19.52:20,0,53	0/1:10,0:7:0:0,0,0	0/1:17,0:12:0:0,0,0	0/0:13,0:12:2.97:0,3,20	0/0:24,0:22:4.43:0,4,51	0/0:29,1:20:3.01:0,3,50	1/1:12,1:11:3.01:38,3,0	1/1:26,0:15:2.27:45,2,0	1/1:18,0:13:3.33:12,3,0	./.
chr10	53116205	.	CTCTCTG	C	2153.21	PASS	AB=1.000;AC=25;AF=0.500;AN=50;BaseQRankSum=-3.424;DP=628;FS=8.259;HRun=0;HaplotypeScore=109.7431;InbreedingCoeff=0.5154;MQ=27.65;MQ0=164;MQRankSum=-2.584;QD=8.58;ReadPosRankSum=1.157;VQSLOD=1.7936;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:24:8.52:0,9,111	0/0:7,0:6:9.03:0,9,147	./.	./.	1/1:18,0:15:2.76:21,3,0	0/0:25,0:17:0.68:0,1,2	0/0:21,0:15:0.57:0,1,1	1/1:11,0:6:7.48:68,7,0	1/1:19,0:16:3.71:50,4,0	1/1:19,2:17:11.77:650,12,0	1/1:16,1:17:3:25,3,0	0/0:15,0:13:3.81:0,4,32	0/0:21,0:15:11.66:0,12,112	1/1:27,0:17:5.64:24,6,0	0/0:22,0:20:6.80:0,7,54	0/1:25,0:17:11.51:12,0,138	0/0:22,0:16:20.53:0,21,206	0/0:14,0:4:2.90:0,3,16	1/1:20,4:17:23.51:529,24,0	1/1:10,0:8:2.60:25,3,0	1/1:18,0:13:2.97:22,3,0	1/1:13,0:10:0.47:1,0,0	0/0:21,0:19:5.01:0,5,45	0/0:32,0:23:2.90:0,3,37	0/0:14,0:13:4.72:0,5,15	1/1:29,1:18:19.25:745,19,0	1/1:17,1:13:11.22:141,11,0	./.
chr10	53116211	.	GTC	G	281.56	PASS	AB=1.000;AC=17;AF=0.354;AN=48;BaseQRankSum=3.301;DP=601;FS=26.893;HRun=0;HaplotypeScore=108.5425;InbreedingCoeff=0.2366;MQ=28.56;MQ0=132;MQRankSum=-2.710;QD=1.27;ReadPosRankSum=2.843;VQSLOD=0.0955;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:22:2.07:0,2,70	0/0:8,0:7:9.50:0,9,106	./.	./.	0/0:13,4:15:0:0,0,0	./.	1/1:18,7:18:2.73:12,3,0	1/1:7,6:6:3.88:124,4,0	1/1:12,6:15:13.28:107,13,0	0/1:22,0:18:34.31:67,0,34	1/1:17,0:17:0.89:2,1,0	0/0:17,0:15:6.92:0,7,48	0/0:21,0:15:11.72:0,12,86	0/0:18,7:16:5.14:0,5,24	0/0:25,0:22:4.35:0,4,27	0/0:25,1:19:8.36:0,8,122	0/0:26,0:19:8.39:0,8,89	0/0:15,0:5:0.24:0,0,1	0/1:20,0:15:25.38:35,0,25	0/1:10,0:8:0:0,0,0	1/1:17,0:12:0.45:1,0,0	0/0:13,0:10:2.96:0,3,19	0/0:21,0:19:1.83:0,2,7	0/1:30,0:20:1.78:2,0,17	0/0:11,2:12:1.71:0,2,4	1/1:30,0:19:0.24:47,0,0	0/1:20,0:15:5.22:5,0,16	./.
chr10	53118032	.	TTGTGTGGGTG	T	3630.76	PASS	AC=14;AF=0.259;AN=54;BaseQRankSum=4.960;DP=786;FS=8.356;HRun=0;HaplotypeScore=229.6475;InbreedingCoeff=0.9623;MQ=68.43;MQ0=17;MQRankSum=-2.744;QD=20.99;ReadPosRankSum=-0.937;VQSLOD=1.4748;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:93.19:0,93,2744	0/0:10,0:10:30.07:0,30,841	0/0:41,0:23:39.40:0,39,512	0/0:41,0:30:41.74:0,42,740	0/0:27,0:27:59.95:0,60,1597	0/0:26,0:25:72.17:0,72,2132	0/0:36,0:36:45:0,45,2214	0/0:29,0:29:63.07:0,63,910	0/0:23,0:23:60.15:0,60,1861	1/1:6,31:36:77.16:1167,77,0	./.	0/0:35,0:34:89.77:0,90,2380	0/0:33,0:31:87.22:0,87,2780	0/0:34,0:33:92.79:0,93,3077	0/0:41,0:40:99:0,117,3306	0/0:28,0:28:72.19:0,72,2425	0/0:32,0:31:70.68:0,71,2581	0/0:23,0:21:56.80:0,57,1652	1/1:4,19:22:62.77:519,63,0	1/1:11,5:17:42:692,42,0	1/1:5,39:44:2.88:15,3,0	0/0:19,0:18:51.05:0,51,1298	0/0:17,0:17:36.08:0,36,1222	0/0:37,0:36:99:0,108,3900	0/0:26,0:26:57.61:0,58,1891	1/1:20,3:23:57.74:620,58,0	1/1:2,19:21:17.48:502,17,0	1/1:5,0:5:14.95:118,15,0
chr10	53118039	.	GGT	G	741.83	PASS	AB=0.944;AC=23;AF=0.426;AN=54;BaseQRankSum=5.549;DP=838;FS=2.953;HRun=0;HaplotypeScore=142.2685;InbreedingCoeff=-0.3812;MQ=62.70;MQ0=27;MQRankSum=-1.896;QD=1.16;ReadPosRankSum=0.753;VQSLOD=2.7895;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:39,1:41:16.82:17,0,619	0/1:13,0:13:3.77:4,0,165	0/0:38,0:19:2.97:0,3,20	0/0:38,0:24:6.01:0,6,66	0/0:13,0:33:27:0,27,255	0/1:27,2:28:15.64:16,0,553	0/1:38,0:41:0.81:1,0,574	0/1:28,0:27:15.70:16,0,80	0/1:28,2:30:67.10:67,0,479	1/1:39,0:36:18.46:97,18,0	./.	0/1:31,5:35:18.83:19,0,521	0/1:31,3:32:78.44:78,0,560	0/1:36,4:39:65.42:65,0,705	0/1:38,6:44:99:109,0,694	0/1:23,6:29:99:117,0,512	0/0:23,0:29:56.08:0,56,586	0/0:18,0:22:13.50:0,14,309	0/0:22,0:21:1.25:0,1,3	0/1:17,0:16:12.89:37,0,13	0/1:45,0:44:4.09:22,0,4	0/1:24,0:24:55.83:56,0,298	0/1:19,0:19:47.24:47,0,268	0/1:41,2:42:51.48:51,0,891	0/1:22,3:25:0.30:0,0,380	0/1:25,0:24:17.30:17,0,19	0/1:22,0:20:4:35,0,4	1/1:9,0:8:2.94:18,3,0
chr10	53118385	.	A	AGTGT	12069.93	PASS	AB=0.678;AC=26;AF=0.464;AN=56;BaseQRankSum=-0.342;DP=988;FS=9.279;HRun=0;HaplotypeScore=183.5341;InbreedingCoeff=0.6658;MQ=59.47;MQ0=19;MQRankSum=3.995;QD=24.33;ReadPosRankSum=-3.622;VQSLOD=2.9521;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:47:87.51:0,88,1480	0/0:7,0:7:12.04:0,12,197	0/0:60,0:15:14.60:0,15,151	0/0:43,0:20:1:0,1,193	0/1:15,0:20:9.76:192,0,10	0/1:13,0:28:23.87:183,0,24	0/1:10,0:30:32.77:128,0,33	1/1:15,28:44:83.73:1254,84,0	1/1:19,0:38:68.92:311,69,0	1/1:31,10:41:77.88:1389,78,0	1/1:12,5:19:32.37:475,32,0	0/0:32,0:34:66.05:0,66,1260	0/0:40,0:45:93.23:0,93,1361	0/1:19,0:40:20.48:270,0,20	0/0:53,0:54:96.12:0,96,1386	0/0:45,0:48:99:0,99,1646	0/0:35,0:35:30.71:0,31,1057	0/0:26,0:27:48.07:0,48,691	1/1:12,9:24:35.81:439,36,0	1/1:9,10:21:44.80:843,45,0	1/1:44,37:83:99:3405,161,0	0/0:17,0:17:27.72:0,28,476	0/0:14,0:15:24.08:0,24,384	0/0:58,0:60:99:0,120,1714	1/1:13,0:28:6.97:236,7,0	1/1:20,13:33:75.21:1486,75,0	1/1:18,10:29:72:1334,72,0	1/1:7,0:7:11.72:124,12,0
chr10	53118482	.	ATG	A	12237.82	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=14.573;DP=904;FS=4.401;HRun=0;HaplotypeScore=130.3125;InbreedingCoeff=0.9434;MQ=61.66;MQ0=2;MQRankSum=0.413;QD=27.69;ReadPosRankSum=3.115;VQSLOD=6.5026;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:84.20:0,84,1299	0/0:14,0:14:33.11:0,33,542	0/0:44,0:30:47.43:0,47,848	0/0:44,0:32:56.49:0,56,807	1/1:0,35:35:93.30:1163,93,0	1/1:4,27:30:69.69:864,70,0	1/1:5,25:30:66.21:825,66,0	0/0:51,0:51:99:0,114,1775	1/1:12,21:33:65.30:992,65,0	1/1:7,49:56:99:1699,138,0	1/1:3,28:31:75.24:938,75,0	0/0:28,0:28:57.19:0,57,936	0/0:29,0:29:63.21:0,63,1023	1/1:6,21:27:57.18:713,57,0	0/0:41,0:41:99:0,102,1659	0/0:37,1:38:67.81:0,68,1619	0/0:16,1:17:1.57:0,2,502	0/0:18,0:18:25.83:0,26,368	1/1:5,10:15:27.05:338,27,0	1/1:2,21:23:45.14:563,45,0	1/1:16,42:59:99:1388,111,0	0/0:29,0:29:43.97:0,44,1250	0/0:18,1:19:10.99:0,11,655	0/0:52,0:52:99:0,117,1839	1/1:3,23:26:54.17:675,54,0	1/1:7,27:33:81.26:1013,81,0	1/1:2,26:30:77.91:928,78,0	1/1:7,5:12:3.63:139,4,0
chr10	53118822	.	C	CA	2366.13	PASS	AB=0.968;AC=13;AF=0.232;AN=56;BaseQRankSum=-7.876;DP=446;FS=0.000;HRun=10;HaplotypeScore=51.9938;InbreedingCoeff=0.8639;MQ=81.90;MQ0=0;MQRankSum=1.204;QD=17.66;ReadPosRankSum=2.295;VQSLOD=3.9784;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:47.94:0,48,394	0/0:7,0:7:17.97:0,18,148	0/0:27,0:21:5.19:0,5,129	0/1:29,0:21:21.51:22,0,81	1/1:5,19:24:57.14:607,57,0	1/1:3,18:22:50.96:522,51,0	1/1:1,10:11:24.06:256,24,0	0/0:28,0:29:67.94:0,68,546	1/1:2,11:14:14.30:342,14,0	0/0:16,0:17:40.98:0,41,324	0/0:24,0:25:64.96:0,65,523	0/0:13,0:13:29.08:0,29,268	0/0:13,0:13:32.96:0,33,271	1/1:1,17:18:48.12:512,48,0	0/0:17,0:17:41.90:0,42,342	0/0:10,0:10:20.95:0,21,172	0/0:25,0:25:62.91:0,63,516	0/0:7,0:7:17.98:0,18,148	0/0:15,0:15:43.97:0,44,348	0/0:15,0:15:32.95:0,33,271	0/0:8,0:8:17.97:0,18,147	0/0:7,0:7:17.98:0,18,148	0/0:7,0:7:17.98:0,18,148	0/0:7,0:7:20.02:0,20,154	1/1:2,12:15:29.90:295,30,0	0/0:19,0:19:56.94:0,57,468	0/0:20,0:20:23.01:0,23,366	0/0:6,0:7:20.02:0,20,154
chr10	53119064	.	AACACAC	A	1790.50	PASS	AB=1.000;AC=32;AF=0.640;AN=50;BaseQRankSum=6.616;DP=380;FS=12.337;HRun=0;HaplotypeScore=80.9034;InbreedingCoeff=0.4430;MQ=59.02;MQ0=23;MQRankSum=1.895;QD=7.78;ReadPosRankSum=2.826;VQSLOD=0.1296;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:18,0:17:5.50:6,0,193	0/1:6,0:6:9.69:10,0,46	./.	./.	1/1:22,0:22:21.54:338,22,0	1/1:22,0:21:15.04:218,15,0	1/1:13,0:12:3:28,3,0	./.	1/1:7,0:6:6.49:101,6,0	1/1:14,0:13:7.15:149,7,0	1/1:16,0:16:12.04:178,12,0	0/1:9,0:8:18.68:19,0,153	0/0:20,0:17:30.06:0,30,556	1/1:10,0:9:3.01:49,3,0	0/0:10,0:9:6.02:0,6,165	1/1:9,7:13:0.89:2,1,0	0/0:8,0:6:2.03:0,2,5	0/0:13,0:11:7.57:0,8,111	1/1:13,0:13:9.03:155,9,0	1/1:18,0:18:9.03:146,9,0	0/1:9,0:7:43.21:43,0,60	0/0:11,0:11:16.71:0,17,418	0/0:13,0:12:21.07:0,21,547	0/0:17,0:15:27.06:0,27,595	1/1:12,0:12:15.52:239,16,0	1/1:14,0:14:8.96:129,9,0	1/1:6,0:5:3.01:49,3,0	1/1:5,0:5:6.02:102,6,0
chr10	53121473	.	A	AT	6558.81	PASS	AB=1.000;AC=27;AF=0.482;AN=56;BaseQRankSum=4.402;DP=502;FS=1.491;HRun=1;HaplotypeScore=75.4878;InbreedingCoeff=0.9151;MQ=79.55;MQ0=0;MQRankSum=-4.441;QD=24.29;ReadPosRankSum=3.974;VQSLOD=4.9932;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:39.06:0,39,481	0/0:10,0:10:30.10:0,30,389	0/0:18,0:18:44.24:0,44,523	0/0:10,0:10:20.93:0,21,240	0/1:30,0:30:52:154,0,52	1/1:21,0:21:34.53:187,35,0	1/1:17,0:17:33.81:119,34,0	0/0:31,0:31:87.26:0,87,1090	1/1:15,0:15:18.11:108,18,0	1/1:4,13:17:51.15:708,51,0	1/1:5,17:22:54.17:770,54,0	0/0:14,0:14:39.03:0,39,469	0/0:17,0:17:51.15:0,51,635	1/1:18,0:18:26.70:163,27,0	0/0:18,0:18:51.17:0,51,660	0/0:20,0:20:60.17:0,60,751	0/0:21,0:21:57.18:0,57,737	0/0:15,0:15:45.10:0,45,561	1/1:2,13:15:42.14:627,42,0	1/1:3,16:19:54.16:767,54,0	1/1:3,6:9:24.02:313,24,0	0/0:20,0:20:57.18:0,57,733	0/0:19,0:19:54.14:0,54,660	0/0:6,0:6:18.06:0,18,233	1/1:15,0:15:11.18:87,11,0	1/1:1,26:27:78.25:1143,78,0	1/1:3,33:37:87.11:1235,87,0	1/1:2,6:8:11.32:177,11,0
chr10	53121474	.	T	TA	5902.53	PASS	AB=1.000;AC=27;AF=0.482;AN=56;BaseQRankSum=4.866;DP=507;FS=0.000;HRun=8;HaplotypeScore=83.8049;InbreedingCoeff=0.9498;MQ=77.58;MQ0=0;MQRankSum=-6.636;QD=21.23;ReadPosRankSum=3.103;VQSLOD=4.9359;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:36.02:0,36,329	0/0:10,0:10:30.02:0,30,275	0/0:17,0:17:35.99:0,36,322	0/0:9,0:9:16.79:0,17,135	1/1:9,25:34:69.21:796,69,0	1/1:1,20:21:57.17:658,57,0	1/1:0,17:17:48.06:524,48,0	0/0:32,0:32:84.02:0,84,762	1/1:3,13:16:42.08:466,42,0	1/1:16,0:17:44.17:288,44,0	0/1:23,0:23:1.55:263,0,2	0/0:13,0:13:33.01:0,33,302	0/0:17,0:17:45.02:0,45,412	1/1:1,17:18:51.11:574,51,0	0/0:17,0:17:51.03:0,51,467	0/0:21,0:21:57.02:0,57,521	0/0:20,0:20:57.03:0,57,522	0/0:15,0:15:42.02:0,42,384	1/1:15,0:15:25.21:266,25,0	1/1:19,0:19:31.23:320,31,0	1/1:9,0:9:17.83:126,18,0	0/0:19,0:19:57.03:0,57,522	0/0:20,0:20:45:0,45,407	0/0:6,0:6:18.01:0,18,165	1/1:3,14:17:45.09:505,45,0	1/1:27,0:27:57.58:485,58,0	1/1:38,0:38:64.83:553,65,0	1/1:7,0:7:12.29:79,12,0
chr10	53121527	.	A	AAAAATCCCAT	32233.52	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-1.875;DP=506;FS=0.716;HRun=0;HaplotypeScore=143.4239;InbreedingCoeff=0.9849;MQ=67.18;MQ0=0;MQRankSum=-15.368;QD=114.71;ReadPosRankSum=0.507;VQSLOD=5.2062;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:45.13:0,45,1259	0/0:9,0:9:27.09:0,27,798	0/0:17,0:16:33.09:0,33,877	0/0:6,0:6:15.05:0,15,330	1/1:12,11:23:54.17:2302,54,0	1/1:8,16:29:60.21:2912,60,0	1/1:13,5:18:51.16:1905,51,0	0/0:26,0:25:66.21:0,66,1869	1/1:4,11:16:45.13:2029,45,0	1/1:14,13:27:72.25:3579,72,0	1/1:8,15:24:63.21:2848,63,0	0/0:13,0:13:39.13:0,39,1154	0/0:18,0:18:51.16:0,51,1439	1/1:10,10:20:57.20:2752,57,0	0/0:20,0:20:57.20:0,57,1719	0/0:19,0:19:51.18:0,51,1547	0/0:21,0:21:54.16:0,54,1501	0/0:18,0:18:48.13:0,48,1311	1/1:15,3:18:51.14:1916,51,0	1/1:10,11:21:63.22:2778,63,0	1/1:3,2:5:12.04:412,12,0	0/0:16,0:16:42.14:0,42,1308	0/0:18,0:18:45.15:0,45,1373	0/0:7,0:7:21.07:0,21,637	1/1:8,9:19:33.11:1498,33,0	1/1:15,8:23:57.20:2626,57,0	1/1:18,17:35:96.33:4218,96,0	1/1:0,3:3:9.03:458,9,0
chr10	53122827	.	ATCTCTCTCTCTCTCTC	A	811.01	PASS	AB=0.908;AC=12;AF=0.273;AN=44;BaseQRankSum=4.275;DP=506;FS=21.707;HRun=0;HaplotypeScore=193.6333;InbreedingCoeff=0.4879;MQ=71.77;MQ0=4;MQRankSum=-2.472;QD=7.58;ReadPosRankSum=1.700;VQSLOD=1.4814;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:3.01:0,3,46	0/0:10,0:10:1.25:0,1,3	./.	./.	0/0:26,0:26:0.47:0,0,1	./.	0/0:25,0:25:22.58:0,23,679	0/0:21,0:21:7.43:0,7,133	0/0:16,0:16:0.47:0,0,1	1/1:12,0:13:6.02:243,6,0	./.	0/0:19,0:19:3.47:0,3,26	0/0:18,0:18:3.48:0,3,116	0/0:22,0:22:5.99:0,6,48	0/0:15,0:15:0.47:0,0,1	0/0:17,0:17:3.90:0,4,128	0/0:16,0:16:5.93:0,6,98	0/0:17,0:17:19.26:0,19,466	1/1:19,0:19:2.92:17,3,0	0/1:17,2:20:0:0,0,0	0/1:17,1:18:0:0,0,0	./.	./.	0/0:23,0:24:6.02:0,6,270	0/0:24,0:24:5.81:0,6,116	1/1:13,0:16:15.05:450,15,0	1/1:15,1:16:6.02:191,6,0	1/1:4,0:4:3.01:30,3,0
chr10	53122886	.	ACACATCTCTTTCT	A	4428.97	PASS	AB=1.000;AC=31;AF=0.646;AN=48;BaseQRankSum=1.705;DP=444;FS=0.000;HRun=0;HaplotypeScore=139.8834;InbreedingCoeff=0.4436;MQ=46.07;MQ0=19;MQRankSum=0.894;QD=17.44;ReadPosRankSum=3.594;VQSLOD=3.4510;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:47,0:11:29.49:0,29,707	0/0:54,0:13:23.29:0,23,588	1/1:17,0:17:1.02:3,1,0	1/1:11,1:11:9.92:253,10,0	1/1:21,1:22:2.40:71,2,0	1/1:8,0:7:12.04:217,12,0	1/1:7,0:7:12.04:371,12,0	0/1:15,0:15:53.29:561,0,53	./.	1/1:12,0:11:5.55:81,6,0	1/1:12,0:10:9.03:155,9,0	1/1:19,2:21:12.02:357,12,0	0/1:11,0:11:0.09:0,0,0	0/0:12,0:12:0:0,0,1	1/1:9,0:8:18.06:255,18,0	1/1:14,0:13:15.93:285,16,0	1/1:19,0:19:48.15:906,48,0	0/1:21,0:20:0.26:0,0,0	./.	0/1:15,0:15:0:0,0,0	0/0:13,0:10:0.89:0,1,2	0/0:13,0:12:0.46:0,0,1	0/0:8,0:8:0.18:0,0,1	0/1:17,0:16:15.34:439,0,15	1/1:15,0:15:17.17:299,17,0	1/1:7,0:6:15.04:176,15,0
chr10	53122888	.	ACATCTCTTTCT	A	5673.89	PASS	AB=0.944;AC=35;AF=0.729;AN=48;BaseQRankSum=0.095;DP=447;FS=0.000;HRun=0;HaplotypeScore=131.9425;InbreedingCoeff=0.3791;MQ=46.46;MQ0=20;MQRankSum=1.148;QD=16.59;ReadPosRankSum=3.314;VQSLOD=3.6697;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:48,0:11:29.42:0,29,744	0/1:56,0:14:0.76:1,0,565	1/1:5,12:17:0.65:1,1,0	1/1:2,9:10:10.28:291,10,0	1/1:7,15:22:2.19:90,2,0	1/1:9,0:8:15.05:314,15,0	1/1:0,7:7:12.04:425,12,0	0/1:15,0:15:53.79:733,0,54	./.	1/1:12,0:11:5.58:95,6,0	1/1:12,0:11:9.03:200,9,0	1/1:8,12:20:12.46:427,12,0	0/1:10,0:10:0.39:0,0,0	0/1:13,0:13:0:0,0,0	1/1:9,0:8:18.06:345,18,0	1/1:13,0:12:15.94:359,16,0	1/1:20,0:20:54.18:1242,54,0	0/1:20,0:19:0.26:0,0,1	./.	0/1:15,0:15:0.06:0,0,0	0/0:13,0:10:0.89:0,1,2	0/1:13,0:12:0.14:0,0,0	0/1:0,8:8:0.04:0,0,0	0/1:17,0:16:15.38:509,0,15	1/1:15,0:15:17.77:369,18,0	1/1:7,0:6:15.05:271,15,0
chr10	53122890	.	ATCTCTTTCT	A	6338.79	PASS	AB=0.634;AC=34;AF=0.708;AN=48;BaseQRankSum=-0.672;DP=425;FS=0.000;HRun=0;HaplotypeScore=119.7811;InbreedingCoeff=0.3792;MQ=47.66;MQ0=16;MQRankSum=1.549;QD=20.92;ReadPosRankSum=3.810;VQSLOD=3.9830;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:50,0:11:29.80:0,30,720	0/1:52,4:14:0.59:1,0,567	1/1:12,5:17:0.53:2,1,0	1/1:10,1:10:9.03:251,9,0	1/1:17,1:18:2.76:91,3,0	1/1:0,6:5:15.05:382,15,0	1/1:7,0:7:12.04:357,12,0	0/1:1,11:15:53.81:886,0,54	./.	1/1:0,0:10:5.70:113,6,0	1/1:2,0:10:9.03:236,9,0	1/1:15,4:19:12.04:354,12,0	0/1:0,10:10:0.06:1,0,0	0/1:0,13:13:0:0,0,0	1/1:1,0:7:15.05:402,15,0	1/1:0,10:12:15.52:437,16,0	1/1:0,18:19:57.18:1492,57,0	0/0:1,14:19:0.94:0,1,2	./.	0/1:0,2:15:0:0,0,0	0/0:1,0:10:0.89:0,1,2	0/1:3,0:9:0.06:0,0,0	0/1:8,0:8:0:0,0,0	0/1:2,10:15:18.34:575,0,18	1/1:0,0:14:15.49:394,15,0	1/1:1,0:6:15.05:365,15,0
chr10	53122894	.	CTT	C	1301.95	PASS	AB=0.942;AC=34;AF=0.708;AN=48;BaseQRankSum=2.752;DP=410;FS=5.849;HRun=3;HaplotypeScore=122.8149;InbreedingCoeff=0.5711;MQ=50.03;MQ0=9;MQRankSum=0.863;QD=5.29;ReadPosRankSum=3.802;VQSLOD=0.2012;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:42,1:11:12.43:0,12,314	0/0:53,1:16:15.61:0,16,180	0/0:17,0:17:0.39:0,0,1	1/1:11,0:10:8.62:46,9,0	1/1:18,0:18:2.34:16,2,0	1/1:6,0:5:11.43:58,11,0	1/1:7,0:7:11.36:56,11,0	1/1:14,1:15:32.61:231,33,0	./.	1/1:9,1:10:2.94:30,3,0	1/1:12,0:10:8.36:59,8,0	1/1:18,0:18:11.03:56,11,0	0/1:10,0:10:0.24:0,0,0	0/1:13,0:13:0.01:0,0,0	1/1:7,0:7:14.85:112,15,0	1/1:12,0:12:14.55:94,15,0	1/1:18,1:19:25.87:273,26,0	0/1:17,2:19:0.32:0,0,1	./.	0/1:12,3:15:0.02:0,0,0	0/1:10,1:9:0:0,0,0	0/0:8,0:8:0:0,0,0	0/1:8,0:8:0.14:0,0,0	1/1:14,1:14:17.18:130,17,0	1/1:11,3:14:13.03:96,13,0	1/1:0,6:6:15.04:159,15,0
chr10	53124011	.	G	GA	11431.46	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=-14.199;DP=546;FS=0.363;HRun=7;HaplotypeScore=49.1666;InbreedingCoeff=0.9669;MQ=75.77;MQ0=0;MQRankSum=-2.781;QD=30.32;ReadPosRankSum=-1.686;VQSLOD=4.4472;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:39.06:0,39,377	0/0:11,0:11:30.02:0,30,282	0/0:7,0:6:5.98:0,6,52	0/0:15,0:14:16.69:0,17,123	1/1:6,36:42:99:1304,108,0	1/1:2,22:24:66.20:797,66,0	1/1:2,12:14:33.10:399,33,0	1/1:1,29:30:84.24:1000,84,0	1/1:3,20:23:57.17:689,57,0	1/1:2,17:19:52.70:608,53,0	1/1:3,34:37:99:1157,99,0	0/0:14,0:14:39.03:0,39,369	0/0:10,0:10:30:0,30,276	1/1:2,10:12:24.07:290,24,0	0/0:22,0:22:54.07:0,54,515	0/0:19,0:19:51.08:0,51,493	1/1:1,11:12:7.13:370,7,0	1/1:4,13:17:36.66:467,37,0	1/1:3,26:29:78.14:908,78,0	1/1:6,20:26:57.17:688,57,0	1/1:2,11:13:33.10:399,33,0	0/0:20,0:20:54.07:0,54,516	0/0:23,0:23:66.11:0,66,637	0/0:9,0:9:27.04:0,27,261	1/1:1,22:23:60.18:725,60,0	1/1:5,26:31:78.24:942,78,0	1/1:3,22:25:57.17:688,57,0	0/0:4,0:4:12.02:0,12,116
chr10	53124534	.	T	TA	14234.13	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-16.856;DP=666;FS=1.719;HRun=6;HaplotypeScore=57.2167;InbreedingCoeff=0.9980;MQ=81.50;MQ0=0;MQRankSum=-2.791;QD=33.57;ReadPosRankSum=-0.386;VQSLOD=4.7359;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:66.15:0,66,673	0/0:11,0:11:24.05:0,24,245	0/0:18,0:18:48.06:0,48,470	0/0:19,0:19:23.70:0,24,508	1/1:3,43:47:99:1602,132,0	1/1:1,16:17:48.15:604,48,0	1/1:0,9:9:27.09:340,27,0	1/1:4,36:40:99:1268,105,0	1/1:1,20:21:54.17:679,54,0	1/1:2,40:42:99:1527,123,0	1/1:0,29:29:84.23:1039,84,0	0/0:20,0:20:60.12:0,60,605	0/0:25,0:25:66.14:0,66,668	1/1:0,24:24:63.20:793,63,0	0/0:27,0:27:78.18:0,78,796	0/0:16,0:16:48.08:0,48,476	1/1:4,15:19:45.14:566,45,0	1/1:0,24:24:57.18:717,57,0	1/1:1,11:12:33.11:415,33,0	1/1:3,28:31:56.67:1026,57,0	1/1:3,7:10:21.07:264,21,0	0/0:27,0:27:78.18:0,78,796	0/0:32,0:32:90.20:0,90,918	0/0:20,0:20:54.12:0,54,551	1/1:2,20:22:57.18:717,57,0	1/1:2,26:28:78.25:981,78,0	1/1:3,38:41:99:1433,114,0	1/1:0,8:8:21.07:264,21,0
chr10	53126456	.	GA	G	4318.14	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=12.905;DP=552;FS=1.177;HRun=6;HaplotypeScore=53.6573;InbreedingCoeff=0.9984;MQ=68.93;MQ0=0;MQRankSum=-1.405;QD=28.60;ReadPosRankSum=1.303;VQSLOD=5.4129;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:69.22:0,69,905	0/0:10,0:10:30.10:0,30,394	0/0:10,0:10:27.06:0,27,326	0/0:10,0:10:21.54:0,22,273	0/0:40,0:40:99:0,117,1520	0/0:18,0:18:54.18:0,54,711	0/0:13,0:13:33.11:0,33,434	0/0:32,0:33:87.17:0,87,1108	0/0:9,0:9:24.08:0,24,315	1/1:4,14:18:39.09:419,39,0	1/1:0,11:11:30.07:322,30,0	0/0:19,0:19:57.19:0,57,749	0/0:18,0:18:54.18:0,54,708	0/0:23,0:23:66.20:0,66,853	0/0:23,0:23:69.20:0,69,878	0/0:13,0:13:36.12:0,36,471	0/0:23,0:23:69.22:0,69,905	0/0:24,0:24:60.17:0,60,772	1/1:2,20:22:60.15:645,60,0	1/1:1,28:29:78.20:838,78,0	1/1:0,11:11:33.08:355,33,0	0/0:19,0:19:48.16:0,48,630	0/0:28,0:28:81.25:0,81,1051	0/0:13,0:13:36.12:0,36,471	0/0:29,0:29:84.27:0,84,1105	1/1:2,22:24:66.17:709,66,0	1/1:2,25:27:69.17:741,69,0	1/1:0,9:9:27.07:290,27,0
chr10	53126864	.	C	CAGAG	891.48	PASS	AB=0.816;AC=13;AF=0.342;AN=38;BaseQRankSum=-5.248;DP=532;FS=0.000;HRun=0;HaplotypeScore=152.1279;InbreedingCoeff=0.3761;MQ=65.37;MQ0=3;MQRankSum=2.809;QD=4.93;ReadPosRankSum=-1.979;VQSLOD=2.3599;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:20:14.71:186,15,0	0/1:5,0:6:18.93:40,0,19	./.	./.	./.	0/0:10,0:13:2.98:0,3,21	0/0:14,0:19:2.97:0,3,20	./.	0/0:4,0:11:0.47:0,0,1	0/0:13,0:18:15:0,15,135	./.	1/1:11,12:24:11.83:185,12,0	0/1:13,10:25:37.71:74,0,38	0/0:7,0:10:3:0,3,28	0/0:16,0:17:2.93:0,3,143	0/1:19,0:27:37.53:60,0,38	0/0:30,0:33:17.42:0,17,150	0/0:19,0:21:6.91:0,7,92	0/0:10,0:11:5.95:0,6,44	./.	./.	1/1:12,9:23:8.50:95,8,0	1/1:10,4:15:5.75:83,6,0	1/1:21,15:39:18.71:307,19,0	./.	0/0:14,0:16:6.01:0,6,56	0/0:14,0:27:27.49:0,27,250	./.
chr10	53126914	.	CACACAG	C	474.71	PASS	AB=0.679;AC=11;AF=0.196;AN=56;BaseQRankSum=1.118;DP=634;FS=0.000;HRun=0;HaplotypeScore=201.6469;InbreedingCoeff=0.7447;MQ=46.98;MQ0=23;MQRankSum=-1.186;QD=4.89;ReadPosRankSum=0.414;VQSLOD=1.8571;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:26:15.03:0,15,224	0/0:8,0:7:21.07:0,21,380	0/0:32,0:18:39.47:0,39,518	0/0:67,0:27:40.81:0,41,573	1/1:10,3:13:9.03:198,9,0	1/1:8,16:23:6.02:86,6,0	0/1:10,9:18:0.26:1,0,0	0/0:35,0:32:69.14:0,69,1027	1/1:7,6:13:2.98:62,3,0	0/0:20,0:20:46.43:0,46,498	0/0:15,0:15:5.65:0,6,90	0/0:26,0:25:39.13:0,39,646	0/0:16,0:15:21.04:0,21,280	1/1:3,11:14:12.04:216,12,0	0/0:21,0:19:39.13:0,39,826	0/0:16,0:16:18.06:0,18,300	0/0:36,0:33:56.15:0,56,695	0/0:25,0:23:45.11:0,45,631	0/0:13,0:8:15.05:0,15,211	0/0:20,0:20:0:0,0,0	0/0:32,0:27:23.70:0,24,375	0/0:20,0:19:24.95:0,25,368	0/0:14,0:13:18.06:0,18,300	0/0:39,0:38:51.01:0,51,1059	1/1:5,8:12:2.60:54,3,0	0/0:16,0:14:32.84:0,33,441	0/0:28,0:28:13.54:0,14,507	0/0:8,0:7:6.01:0,6,116
chr10	53126931	.	A	AGAC	578.35	PASS	AB=0.994;AC=15;AF=0.268;AN=56;BaseQRankSum=-0.678;DP=702;FS=5.409;HRun=0;HaplotypeScore=187.2740;InbreedingCoeff=0.5265;MQ=51.49;MQ0=23;MQRankSum=-1.386;QD=3.06;ReadPosRankSum=-8.323;VQSLOD=-0.6933;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:26:12.61:0,13,215	0/0:9,0:8:24.08:0,24,382	0/0:44,0:28:34.03:0,34,605	0/0:73,0:36:10.83:0,11,546	1/1:5,7:12:10.01:207,10,0	1/1:23,0:22:7.13:88,7,0	1/1:14,0:13:1.55:4,2,0	0/0:34,0:31:78.68:0,79,1127	1/1:11,1:12:3.15:63,3,0	0/0:25,0:23:48.74:0,49,546	0/0:18,0:18:3.40:0,3,93	0/0:27,0:26:45.55:0,46,727	0/0:16,0:16:16.99:0,17,287	1/1:14,0:14:11.63:196,12,0	0/0:21,0:20:37.48:0,37,671	0/0:15,0:14:30.09:0,30,462	0/0:39,0:36:56.70:0,57,779	0/0:22,1:22:39.74:0,40,621	0/0:25,0:19:5.71:0,6,280	0/1:21,0:20:2.08:2,0,14	0/1:56,0:48:75.90:76,0,363	0/0:25,0:24:11.01:0,11,360	0/0:12,0:11:24:0,24,340	0/0:46,0:44:65.80:0,66,1001	1/1:14,0:13:3.01:55,3,0	0/0:23,0:21:46.72:0,47,638	0/1:22,0:22:43.84:44,0,423	0/0:9,0:8:3.53:0,4,88
chr10	53126937	.	AGAC	A	1827.13	PASS	AB=0.967;AC=20;AF=0.357;AN=56;BaseQRankSum=10.667;DP=656;FS=3.411;HRun=0;HaplotypeScore=150.7379;InbreedingCoeff=0.2717;MQ=51.08;MQ0=39;MQRankSum=-6.075;QD=6.05;ReadPosRankSum=2.154;VQSLOD=3.0550;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:27:16.43:0,16,313	0/0:10,0:9:18.06:0,18,380	0/0:45,0:26:2.18:0,2,254	0/0:64,0:34:3.39:0,3,436	1/1:11,0:11:1.84:12,2,0	0/1:20,0:19:1.32:42,0,1	0/0:11,0:10:1.21:0,1,5	0/0:29,0:25:39.31:0,39,549	1/1:8,0:8:2.38:7,2,0	0/1:18,7:22:98.24:400,0,98	0/1:17,0:16:34.24:34,0,55	0/0:22,0:22:52.23:0,52,887	0/0:14,0:14:23.20:0,23,287	1/1:11,0:11:6.70:46,7,0	0/0:19,0:18:45.25:0,45,819	0/0:13,0:12:30.10:0,30,612	1/1:33,2:33:54.51:547,55,0	1/1:18,3:20:38.19:285,38,0	0/1:28,0:20:18.77:185,0,19	0/0:21,0:18:5.70:0,6,18	0/1:61,0:49:86.32:86,0,388	0/0:20,0:18:30.28:0,30,401	0/0:11,0:10:19.13:0,19,313	0/0:44,1:43:67.76:0,68,1291	1/1:11,0:11:1.25:3,1,0	0/1:25,0:21:8.96:171,0,9	0/1:19,1:20:99:159,0,102	0/1:9,0:8:0.37:14,0,0
chr10	53126940	.	C	CACA	5228.08	PASS	AB=0.743;AC=12;AF=0.214;AN=56;BaseQRankSum=-1.579;DP=626;FS=0.447;HRun=0;HaplotypeScore=132.6878;InbreedingCoeff=-0.0948;MQ=49.85;MQ0=44;MQRankSum=-5.811;QD=19.51;ReadPosRankSum=0.319;VQSLOD=4.3254;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,1:25:18.16:0,18,339	0/0:8,0:6:18.06:0,18,335	0/0:39,0:22:28.50:0,29,638	0/0:58,0:30:22.92:0,23,605	0/0:11,0:11:12.04:0,12,193	0/1:17,2:19:36.16:42,0,36	0/0:11,0:10:2.94:0,3,42	0/0:22,2:20:45.15:0,45,754	0/0:8,0:8:2.41:0,2,34	0/1:19,5:21:99:666,0,256	0/1:9,8:14:99:130,0,164	0/0:20,0:20:54.18:0,54,972	0/0:10,0:10:27.09:0,27,428	0/1:11,0:11:3.91:4,0,63	0/0:21,1:21:45.95:0,46,847	0/0:14,0:13:36.11:0,36,623	1/1:12,18:34:59.96:1182,60,0	0/1:8,12:21:13.55:924,0,14	0/1:20,8:20:99:310,0,328	0/0:7,11:15:8.59:0,9,126	0/1:34,27:50:99:526,0,538	0/0:17,0:15:38.30:0,38,613	0/0:11,0:10:21.07:0,21,363	0/0:45,0:43:69.39:0,69,1255	0/0:11,0:11:2.59:0,3,34	0/1:12,12:20:99:566,0,346	0/1:4,12:17:52.62:738,0,53	0/1:5,3:7:32.48:138,0,32
chr10	53126944	.	ACAGAC	A	1871.05	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=10.911;DP=632;FS=2.185;HRun=0;HaplotypeScore=151.6121;InbreedingCoeff=-0.0721;MQ=49.60;MQ0=57;MQRankSum=-5.099;QD=6.26;ReadPosRankSum=-0.729;VQSLOD=2.4212;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:27:21.53:0,22,394	0/0:8,0:6:18.06:0,18,466	0/0:38,0:18:45.85:0,46,628	0/0:56,0:25:32.05:0,32,591	0/0:11,0:11:11.94:0,12,187	0/1:21,0:20:51.79:72,0,52	0/0:11,0:10:2.19:0,2,55	0/0:20,0:16:45.14:0,45,762	0/1:11,0:10:20.56:21,0,36	0/1:25,0:21:99:149,0,461	0/1:17,0:14:43.23:43,0,298	0/0:19,0:19:57.19:0,57,1160	0/0:10,0:10:27.09:0,27,565	0/1:11,0:11:29.23:29,0,115	0/0:25,0:22:60.68:0,61,1382	0/0:13,0:13:36.12:0,36,881	1/1:34,4:35:57.14:641,57,0	0/1:23,0:22:60.95:415,0,61	0/1:28,0:18:14.49:14,0,565	0/0:17,0:14:8.62:0,9,148	0/1:63,0:51:99:187,0,1049	0/0:18,0:16:39.13:0,39,831	0/0:12,0:10:24.08:0,24,446	0/0:46,0:43:82.63:0,83,2101	1/1:12,0:12:2.95:32,3,0	0/1:25,0:20:99:193,0,576	0/1:17,0:17:99:214,0,184	0/1:8,0:7:22.98:23,0,71
chr10	53126946	.	AGAC	A	1120.97	PASS	AB=0.990;AC=16;AF=0.286;AN=56;BaseQRankSum=10.476;DP=635;FS=4.506;HRun=0;HaplotypeScore=140.6507;InbreedingCoeff=-0.0787;MQ=48.55;MQ0=61;MQRankSum=-4.576;QD=3.59;ReadPosRankSum=-0.754;VQSLOD=2.2368;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,2:27:18.16:0,18,347	0/0:8,0:6:18.06:0,18,403	0/0:40,0:17:42.12:0,42,714	0/0:53,0:24:38.10:0,38,596	0/0:11,0:11:8.99:0,9,189	0/1:20,1:20:57.77:86,0,58	0/1:12,0:11:40.51:41,0,54	0/0:17,1:14:39.13:0,39,833	0/1:12,1:12:6.76:7,0,49	0/1:25,0:21:47.98:48,0,475	0/1:17,0:14:15.17:15,0,297	0/0:19,0:19:54.18:0,54,1151	0/0:10,0:10:27.09:0,27,581	0/1:11,0:11:21.89:22,0,147	0/0:26,0:22:60.21:0,60,1326	0/0:13,0:13:36.12:0,36,808	1/1:37,0:34:56.36:490,56,0	0/1:23,0:22:77.82:266,0,78	0/1:28,0:18:4.50:5,0,668	0/0:16,0:13:8.62:0,9,184	0/1:64,0:52:72.39:72,0,959	0/0:18,0:16:36.12:0,36,769	0/0:13,0:10:24.08:0,24,512	0/0:49,0:46:88.62:0,89,1889	1/1:11,0:11:3:28,3,0	0/1:25,0:20:84.01:84,0,665	0/1:17,0:17:99:110,0,222	0/1:8,0:7:8.99:9,0,93
chr10	53126949	.	C	CACA	600.82	PASS	AB=0.914;AC=10;AF=0.179;AN=56;BaseQRankSum=3.799;DP=599;FS=4.923;HRun=0;HaplotypeScore=124.8338;InbreedingCoeff=-0.0321;MQ=49.69;MQ0=68;MQRankSum=-2.896;QD=3.58;ReadPosRankSum=-5.414;VQSLOD=0.1860;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:25:17.98:0,18,307	0/0:7,0:6:18.06:0,18,335	0/0:42,0:17:43.01:0,43,680	0/0:47,0:21:34.73:0,35,574	0/0:9,0:9:8.99:0,9,168	0/1:17,1:19:77.45:115,0,77	0/1:14,0:13:35.91:98,0,36	0/0:16,1:14:39.13:0,39,709	0/1:9,4:12:48.42:68,0,48	0/1:16,0:11:1.94:2,0,445	0/0:12,0:9:21:0,21,341	0/0:18,0:18:54.18:0,54,973	0/0:10,0:10:27.09:0,27,492	0/1:11,0:11:3.44:3,0,149	0/0:28,0:24:60.21:0,60,1112	0/0:13,0:13:36.12:0,36,671	0/1:25,9:33:99:273,0,264	0/1:19,1:20:77.70:78,0,516	0/1:26,1:19:23.08:23,0,782	0/0:10,0:7:9.03:0,9,167	0/0:63,0:52:77.31:0,77,1265	0/0:18,0:15:36.12:0,36,670	0/0:12,0:9:24.08:0,24,425	0/0:50,0:47:87.88:0,88,1623	1/1:10,0:11:3.01:74,3,0	0/0:19,0:14:18.35:0,18,676	0/0:15,0:15:11.36:0,11,391	0/0:8,0:7:9.03:0,9,143
chr10	53127057	.	CACA	C	269.07	PASS	AB=0.961;AC=7;AF=0.152;AN=46;BaseQRankSum=4.278;DP=542;FS=31.205;HRun=0;HaplotypeScore=57.1338;InbreedingCoeff=-0.0710;MQ=29.36;MQ0=253;MQRankSum=-5.122;QD=2.01;ReadPosRankSum=0.770;VQSLOD=-0.5422;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:8:0.59:11,1,0	0/0:8,0:4:3.90:0,4,54	./.	./.	./.	0/1:13,0:9:43.59:44,0,84	0/0:24,0:2:3:0,3,25	0/1:7,1:4:43.21:89,0,43	0/0:16,0:8:15.26:0,15,246	0/1:14,1:7:99:135,0,133	./.	0/0:30,0:15:31.42:0,31,465	0/0:33,1:18:34.35:0,34,483	0/0:21,0:8:14.86:0,15,233	0/0:28,0:12:18.53:0,19,300	0/0:28,0:15:24.05:0,24,359	0/1:37,0:19:76.54:77,0,373	0/1:39,1:25:29.72:30,0,468	0/0:8,0:3:9.02:0,9,128	0/0:8,0:4:6.02:0,6,100	0/0:51,0:20:9.29:0,9,186	0/0:14,0:3:6.02:0,6,89	./.	0/0:74,0:32:44.88:0,45,704	0/0:12,1:5:9.03:0,9,139	0/0:8,0:4:9.03:0,9,150	0/0:19,0:5:4.37:0,4,44	0/0:9,0:4:12.03:0,12,175
chr10	53127063	.	CACA	C	327.66	PASS	AB=0.937;AC=7;AF=0.167;AN=42;BaseQRankSum=4.580;DP=547;FS=28.648;HRun=0;HaplotypeScore=62.2177;InbreedingCoeff=-0.0783;MQ=29.18;MQ0=253;MQRankSum=-4.794;QD=2.39;ReadPosRankSum=1.959;VQSLOD=0.0733;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:9:0.63:6,1,0	0/0:8,0:4:3.90:0,4,53	./.	./.	./.	0/1:11,2:10:37.16:37,0,127	./.	0/1:6,0:4:56.41:63,0,56	0/0:17,0:8:12.51:0,13,188	0/1:13,1:8:99:104,0,176	./.	0/0:31,0:17:35.23:0,35,502	0/0:36,0:20:37.13:0,37,508	0/0:21,0:8:11.84:0,12,170	0/0:25,1:10:15.05:0,15,240	0/0:27,0:14:18.05:0,18,263	0/1:33,5:19:99:163,0,393	0/1:42,0:26:66.02:66,0,464	0/0:8,0:3:9.03:0,9,140	0/0:7,0:4:6.02:0,6,91	0/0:52,1:21:11.81:0,12,205	0/0:11,0:1:3.01:0,3,40	./.	0/0:76,1:34:50.47:0,50,726	./.	0/0:10,0:3:9.03:0,9,150	0/0:19,2:7:13.71:0,14,157	0/0:7,0:3:9.03:0,9,150
chr10	53127069	.	CACA	C	206.37	PASS	AB=0.974;AC=7;AF=0.146;AN=48;BaseQRankSum=4.692;DP=550;FS=23.560;HRun=0;HaplotypeScore=60.8096;InbreedingCoeff=-0.0173;MQ=29.23;MQ0=253;MQRankSum=-4.530;QD=1.48;ReadPosRankSum=2.257;VQSLOD=-0.6682;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:8:2.18:8,2,0	0/0:9,0:5:3.48:0,3,52	./.	./.	0/0:8,0:4:3.01:0,3,46	0/1:16,1:11:34.15:34,0,168	0/0:23,0:2:0:0,0,0	0/1:5,0:4:16.23:16,0,51	0/0:17,0:8:12.93:0,13,183	0/1:14,0:9:57.69:58,0,136	0/0:5,0:1:3.01:0,3,44	0/0:31,0:17:35.60:0,36,523	0/0:33,0:18:27.93:0,28,383	0/0:21,1:8:11.85:0,12,185	0/0:27,2:13:24.07:0,24,346	0/0:26,0:13:15.05:0,15,240	0/1:40,1:22:99:133,0,548	0/1:37,2:23:70.84:71,0,384	0/0:11,0:5:10.81:0,11,190	0/0:6,0:3:3.01:0,3,44	0/0:50,0:20:11.80:0,12,197	./.	./.	0/0:74,0:30:41.53:0,42,663	0/0:11,0:3:3.01:0,3,46	0/0:11,0:4:12.04:0,12,185	0/0:22,0:8:14.54:0,15,190	0/0:7,0:3:9.03:0,9,150
chr10	53127277	.	AACACACACACACACACACACACACACAC	A	1325.09	PASS	AB=0.826;AC=13;AF=0.250;AN=52;BaseQRankSum=3.516;DP=518;FS=26.848;HRun=0;HaplotypeScore=307.6545;InbreedingCoeff=0.6781;MQ=70.65;MQ0=10;MQRankSum=-0.118;QD=9.89;ReadPosRankSum=-0.479;VQSLOD=1.2677;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:18.06:0,18,1216	0/0:7,0:7:12.04:0,12,1029	0/0:26,0:14:3.01:0,3,43	./.	0/0:16,0:18:15.05:0,15,843	0/0:19,0:19:27.09:0,27,1316	0/0:18,0:18:27.09:0,27,1236	0/0:22,0:22:24.66:0,25,883	0/0:18,0:20:28.91:0,29,1117	1/1:17,0:16:6:80,6,0	1/1:10,0:10:3.01:72,3,0	0/0:15,0:15:21.54:0,22,1980	0/0:7,0:7:3.01:0,3,175	0/0:16,0:17:26.75:0,27,938	0/0:21,0:19:45.12:0,45,4366	0/0:16,0:15:21.07:0,21,1854	0/0:21,0:21:32.39:0,32,2271	0/0:12,0:12:19.88:0,20,1512	1/1:17,3:18:0.92:118,1,0	0/1:15,4:18:17.94:116,0,18	1/1:20,0:20:9.02:120,9,0	0/0:22,0:21:27.09:0,27,2384	0/0:17,0:17:24.08:0,24,1583	0/0:31,0:29:37.68:0,38,3479	0/0:19,0:19:21.07:0,21,1170	1/1:22,6:26:12.02:330,12,0	1/1:12,8:19:9.01:645,9,0	./.
chr10	53133534	.	C	CAA	4273.22	PASS	AB=0.831;AC=18;AF=0.321;AN=56;BaseQRankSum=-3.150;DP=684;FS=1.228;HRun=12;HaplotypeScore=158.0516;InbreedingCoeff=0.7060;MQ=75.92;MQ0=1;MQRankSum=-2.675;QD=17.02;ReadPosRankSum=-6.951;VQSLOD=0.4047;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:20:41.67:0,42,372	0/1:8,1:11:30.41:30,0,103	0/0:24,0:21:13.52:0,14,139	0/1:21,1:23:19.78:20,0,126	0/0:0,0:21:49.60:0,50,221	0/0:3,0:17:38.65:0,39,182	0/0:6,0:26:49.37:0,49,214	0/0:32,0:37:66.99:0,67,625	0/0:6,0:17:27.51:0,28,134	1/1:14,22:38:47.07:778,47,0	1/1:3,17:20:54.74:698,55,0	0/0:20,0:21:23.46:0,23,206	0/0:32,0:33:28.61:0,29,485	0/0:9,0:28:41.34:0,41,194	0/0:32,0:33:62.34:0,62,545	0/0:29,0:30:65.62:0,66,594	0/1:19,0:22:0.47:0,0,294	0/0:22,0:22:41.77:0,42,380	1/1:10,10:22:35.50:386,35,0	1/1:3,22:26:59.89:673,60,0	1/1:4,16:24:31.55:379,32,0	0/0:25,0:27:68.65:0,69,659	0/0:23,0:24:48.95:0,49,448	0/0:39,0:39:68.60:0,69,631	0/0:2,0:14:24.79:0,25,121	1/1:5,19:27:56.48:616,56,0	1/1:7,20:28:48.11:625,48,0	0/1:2,1:9:16.25:68,0,16
chr10	53133720	.	T	TCAC	5313.36	PASS	AB=0.587;AC=17;AF=0.304;AN=56;BaseQRankSum=20.118;DP=1132;FS=20.714;HRun=0;HaplotypeScore=230.2356;InbreedingCoeff=-0.2615;MQ=52.60;MQ0=24;MQRankSum=1.451;QD=8.81;ReadPosRankSum=10.432;VQSLOD=2.3179;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:34:87.10:0,87,1508	0/0:17,0:17:49.05:0,49,862	0/0:75,0:22:60.20:0,60,941	0/0:67,0:31:80.45:0,80,1354	0/1:10,0:23:13.26:196,0,13	0/1:14,0:27:99:346,0,158	0/1:14,0:48:99:215,0,321	0/0:62,0:56:99:0,156,2552	0/1:3,0:34:49.54:378,0,50	0/1:6,0:39:75.73:525,0,76	0/1:4,1:31:81.11:239,0,81	0/0:42,0:41:99:0,114,2054	0/0:48,0:48:99:0,138,2469	0/1:25,0:53:99:698,0,114	0/0:49,0:49:99:0,138,2353	0/0:36,0:36:66.89:0,67,1584	0/1:10,0:29:99:123,0,111	0/1:11,0:42:64.48:115,0,64	0/1:14,0:27:99:228,0,235	0/1:5,0:32:99:167,0,162	0/1:19,2:98:99:698,0,193	0/0:32,0:33:93.32:0,93,1668	0/0:24,0:24:55.25:0,55,1092	0/0:40,0:40:99:0,102,1773	1/1:1,0:26:26.96:247,27,0	0/1:10,1:42:99:575,0,166	0/1:3,0:29:66.87:451,0,67	0/1:4,0:12:43.52:114,0,44
chr10	53133819	.	G	GCA	6582.24	PASS	AB=0.683;AC=10;AF=0.179;AN=56;BaseQRankSum=-6.129;DP=1097;FS=1.499;HRun=0;HaplotypeScore=173.1156;InbreedingCoeff=0.7579;MQ=52.42;MQ0=26;MQRankSum=3.322;QD=26.33;ReadPosRankSum=3.085;VQSLOD=5.3953;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:43:99:0,105,1253	0/0:16,0:16:28.97:0,29,334	0/0:67,0:18:34.91:0,35,313	0/0:73,0:15:34.58:0,35,305	1/1:3,24:27:23.01:897,23,0	1/1:10,31:40:60.20:984,60,0	0/1:24,22:47:18.10:1220,0,18	0/0:49,0:44:75.19:0,75,878	1/1:3,40:42:72.25:1181,72,0	0/0:44,0:43:99:0,116,1392	0/0:16,0:16:26.51:0,27,306	0/0:54,0:54:99:0,138,1638	0/0:44,0:45:93.12:0,93,1128	1/1:10,47:57:99:1671,102,0	0/0:47,0:47:99:0,135,1632	0/0:49,0:49:99:0,122,1461	0/0:37,0:37:73.51:0,74,909	0/0:37,0:37:55.87:0,56,901	0/0:29,0:29:68:0,68,763	0/0:20,0:20:38.29:0,38,430	0/0:73,0:70:99:0,101,1481	0/0:27,0:30:62.84:0,63,717	0/0:28,0:28:54.16:0,54,658	0/0:31,0:31:69.09:0,69,854	0/1:19,15:34:24.08:630,0,24	0/0:22,0:22:60.14:0,60,723	0/0:21,0:21:42.01:0,42,518	0/0:11,0:11:26.92:0,27,307
chr10	53134349	.	C	CA	1823.60	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.902;DP=627;FS=1.200;HRun=1;HaplotypeScore=68.9657;InbreedingCoeff=0.9947;MQ=92.45;MQ0=1;MQRankSum=-1.717;QD=34.41;ReadPosRankSum=2.525;VQSLOD=3.6993;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,144,1818	0/0:15,0:15:39.09:0,39,474	0/0:25,0:24:66.17:0,66,815	0/0:31,0:31:80.39:0,80,1021	0/0:17,0:17:45.12:0,45,553	0/0:17,0:17:51.17:0,51,657	0/0:33,0:33:96.16:0,96,1108	0/0:32,0:32:87.26:0,87,1093	0/0:24,0:24:69.20:0,69,865	0/0:25,0:25:72.22:0,72,919	0/0:11,0:11:33.09:0,33,412	0/0:23,0:23:69.19:0,69,853	0/0:20,0:20:60.18:0,60,761	0/0:22,0:22:63.17:0,63,774	0/0:31,0:31:93.27:0,93,1175	0/0:29,0:28:84.26:0,84,1075	1/1:2,39:41:99:1532,105,0	1/1:2,10:11:30.05:413,30,0	0/0:16,0:16:45.14:0,45,571	0/0:14,0:14:30.10:0,30,389	0/0:33,0:33:90.22:0,90,1093	0/0:19,0:19:51.17:0,51,660	0/0:10,0:10:30.08:0,30,373	0/0:24,0:24:66.10:0,66,790	0/0:12,0:12:33.10:0,33,415	0/0:14,0:14:42.12:0,42,528	0/0:21,0:21:63.18:0,63,787	0/0:6,0:6:18.06:0,18,233
chr10	53134650	.	TTCTC	T	732.04	PASS	AB=0.979;AC=15;AF=0.300;AN=50;BaseQRankSum=3.916;DP=457;FS=2.293;HRun=0;HaplotypeScore=101.8125;InbreedingCoeff=0.2840;MQ=71.66;MQ0=9;MQRankSum=-3.321;QD=4.44;ReadPosRankSum=0.980;VQSLOD=2.2292;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:26:34.19:0,34,408	0/1:11,0:11:1.61:2,0,191	./.	0/0:31,0:21:2.49:0,2,71	0/0:15,0:15:12.03:0,12,181	0/1:15,1:16:71.39:85,0,71	0/0:18,0:18:21.95:0,22,287	0/1:31,0:29:15.17:24,0,15	0/1:9,0:10:24.15:60,0,24	1/1:15,0:14:18.05:247,18,0	./.	0/0:15,0:15:9.65:0,10,157	0/1:15,0:15:64.48:64,0,437	0/1:19,0:19:10.19:10,0,231	0/0:14,0:14:17.73:0,18,366	0/0:19,0:19:19.02:0,19,367	0/0:18,0:19:25.33:0,25,435	0/0:5,0:7:6.02:0,6,124	1/1:9,0:8:3.01:39,3,0	0/0:11,1:13:0:0,0,0	./.	0/0:10,0:10:12.04:0,12,217	0/0:8,0:8:12.04:0,12,233	0/0:23,0:21:32.58:0,33,596	0/0:17,0:17:8.75:0,9,86	1/1:12,2:14:15.04:195,15,0	1/1:19,0:20:6.45:133,6,0	0/1:3,0:3:0.58:26,0,1
chr10	53134685	.	TCTCTCC	T	1120.45	PASS	AB=0.914;AC=11;AF=0.204;AN=54;BaseQRankSum=1.354;DP=453;FS=17.789;HRun=0;HaplotypeScore=126.8980;InbreedingCoeff=0.1440;MQ=44.53;MQ0=35;MQRankSum=-6.483;QD=8.75;ReadPosRankSum=-2.037;VQSLOD=1.0112;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:32:64.75:0,65,1139	0/0:8,0:8:18.05:0,18,399	./.	0/0:29,0:3:6.48:0,6,98	0/0:14,0:14:12.04:0,12,237	0/1:20,1:21:99:105,0,108	0/0:22,0:21:25.40:0,25,361	0/1:14,0:12:60.66:66,0,61	0/1:12,0:13:4.71:5,0,80	0/1:13,4:14:17.62:404,0,18	0/1:14,0:14:15.17:15,0,30	0/0:21,0:21:46.40:0,46,837	0/0:16,0:16:14.66:0,15,829	0/0:14,0:15:14.84:0,15,305	0/0:18,0:18:37.98:0,38,762	0/0:19,0:19:42.40:0,42,791	0/0:19,0:19:43.91:0,44,858	0/0:6,0:6:9.02:0,9,212	1/1:13,0:13:16.58:192,17,0	0/0:10,0:10:0.48:0,0,1	0/0:11,0:11:6.37:0,6,33	0/0:9,0:7:20.98:0,21,427	0/0:15,0:15:29.75:0,30,535	0/0:25,0:24:66.16:0,66,1597	0/0:14,0:13:8.96:0,9,129	0/1:20,0:18:94.18:287,0,94	0/1:5,7:12:4.94:179,0,5	1/1:4,0:4:0.26:8,0,0
chr10	53134690	.	C	CA	405.51	PASS	AB=0.941;AC=16;AF=0.286;AN=56;BaseQRankSum=7.204;DP=472;FS=7.352;HRun=0;HaplotypeScore=110.2323;InbreedingCoeff=-0.1236;MQ=44.77;MQ0=33;MQRankSum=1.371;QD=1.79;ReadPosRankSum=-3.514;VQSLOD=0.2537;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:32:76.85:0,77,840	0/0:8,0:8:17.19:0,17,165	0/0:22,0:1:2.80:0,3,13	0/0:31,0:2:3.48:0,3,43	0/1:12,1:14:15.14:15,0,27	0/1:16,6:21:30.56:103,0,31	0/1:19,2:20:75.73:76,0,96	0/0:11,0:11:23.37:0,23,192	1/1:11,3:15:7.81:111,8,0	0/1:18,0:16:2.79:3,0,106	0/1:15,0:15:15.43:15,0,41	0/0:21,0:21:48.13:0,48,635	0/0:16,0:16:43.57:0,44,516	0/1:15,3:18:73.06:76,0,73	0/0:19,0:19:38.35:0,38,507	0/0:18,0:18:41.62:0,42,547	0/1:21,0:21:23.77:24,0,206	0/1:6,0:6:32.77:33,0,65	0/1:15,0:15:1.76:2,0,206	1/1:14,0:14:2.09:41,2,0	0/1:11,2:13:28.97:29,0,30	0/0:10,0:8:20.68:0,21,221	0/0:14,0:14:29.72:0,30,378	0/0:24,0:23:59.58:0,60,768	0/0:12,1:13:0.12:0,0,10	0/1:21,0:19:6.47:6,0,242	0/1:13,0:13:19.03:21,0,19	0/0:4,0:4:6.81:0,7,41
chr10	53134707	.	A	AAC	1135.18	PASS	AB=1.000;AC=30;AF=0.536;AN=56;BaseQRankSum=7.720;DP=546;FS=7.419;HRun=0;HaplotypeScore=115.5621;InbreedingCoeff=0.4015;MQ=50.01;MQ0=43;MQRankSum=-1.282;QD=3.84;ReadPosRankSum=-2.508;VQSLOD=1.5711;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:52.24:0,52,581	1/1:4,6:10:14.91:169,15,0	0/0:44,0:7:12.04:0,12,139	0/0:58,0:11:3.76:0,4,73	1/1:15,0:15:5.99:48,6,0	1/1:20,0:19:9:77,9,0	1/1:25,0:24:8.33:94,8,0	1/1:16,0:15:0.40:1,0,0	1/1:10,0:10:9:83,9,0	1/1:19,0:18:4.08:123,4,0	0/1:17,0:17:15.41:68,0,15	0/0:21,0:21:44.98:0,45,504	0/0:15,0:15:21.05:0,21,234	1/1:14,0:14:12.88:108,13,0	0/0:21,0:21:42.10:0,42,471	0/1:19,0:19:8.06:8,0,349	0/1:25,0:25:13.14:167,0,13	1/1:8,0:8:0.93:17,1,0	0/1:14,0:12:5.90:61,0,6	1/1:15,0:14:2.67:42,3,0	0/1:18,0:18:6.71:96,0,7	0/0:12,0:11:27.08:0,27,315	0/0:14,0:14:24.02:0,24,280	0/0:26,0:25:47.58:0,48,509	1/1:19,0:18:10.39:78,10,0	0/1:20,0:19:6.19:58,0,6	1/1:12,0:12:4.11:19,4,0	0/0:3,0:3:1.66:0,2,13
chr10	53134898	.	TC	T	7339	PASS	AB=0.974;AC=26;AF=0.464;AN=56;BaseQRankSum=3.792;DP=651;FS=5.359;HRun=2;HaplotypeScore=71.8003;InbreedingCoeff=0.5546;MQ=84.32;MQ0=0;MQRankSum=-1.523;QD=20.56;ReadPosRankSum=1.160;VQSLOD=4.7169;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,123,1636	0/0:4,0:4:12.04:0,12,170	0/0:20,0:20:53.44:0,53,708	0/0:20,0:20:56.58:0,57,610	0/1:19,1:20:40.40:40,0,103	0/1:23,0:23:20.16:20,0,121	0/1:23,2:25:99:130,0,107	0/0:29,0:29:84.15:0,84,1032	0/1:17,0:17:14.68:15,0,87	1/1:0,22:22:66.19:827,66,0	1/1:1,17:18:48.16:620,48,0	0/0:24,0:24:69.18:0,69,921	0/0:20,0:20:60.16:0,60,809	0/1:27,0:27:16.91:17,0,130	0/0:38,0:38:99:0,111,1520	0/0:26,0:26:72.21:0,72,983	1/1:1,34:35:78.25:1008,78,0	1/1:0,15:15:36.12:465,36,0	1/1:1,15:16:45.10:540,45,0	1/1:0,36:36:99:1303,105,0	1/1:1,20:21:54.18:697,54,0	0/0:29,0:29:84.26:0,84,1152	0/0:24,0:24:72.21:0,72,997	0/0:17,0:17:51.17:0,51,721	0/1:27,1:28:42.33:42,0,147	1/1:1,20:21:57.17:724,57,0	1/1:0,31:31:63.20:813,63,0	1/1:0,2:2:6.02:78,6,0
chr10	53135232	.	G	GA	15210.51	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=-5.176;DP=736;FS=2.683;HRun=4;HaplotypeScore=79.3516;InbreedingCoeff=0.9992;MQ=82.35;MQ0=0;MQRankSum=-4.205;QD=37.37;ReadPosRankSum=1.435;VQSLOD=4.9675;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,99,1110	0/0:11,0:11:33.09:0,33,374	0/0:24,0:24:59.88:0,60,644	0/0:25,0:25:62.68:0,63,649	1/1:2,30:33:93.26:1240,93,0	1/1:0,23:23:69.23:944,69,0	1/1:1,32:33:84.28:1148,84,0	0/0:14,0:14:42.11:0,42,469	1/1:4,18:22:20.14:664,20,0	1/1:2,21:23:63.19:839,63,0	1/1:0,23:23:69.23:944,69,0	0/0:30,0:30:81.23:0,81,918	0/0:26,0:26:78.22:0,78,884	1/1:2,31:33:93.31:1272,93,0	0/0:36,0:36:99:0,108,1224	0/0:19,0:19:54.14:0,54,604	1/1:1,19:20:57.19:769,57,0	1/1:0,13:13:39.13:533,39,0	1/1:1,22:22:66.21:885,66,0	1/1:3,27:30:81.27:1108,81,0	1/1:2,30:32:87.29:1190,87,0	0/0:38,0:38:99:0,108,1215	0/0:30,0:30:84.24:0,84,952	0/0:40,0:40:99:0,114,1269	1/1:1,28:29:72.24:985,72,0	1/1:0,34:34:99:1377,102,0	1/1:4,22:26:66.22:903,66,0	1/1:0,10:10:30.10:410,30,0
chr10	53135479	.	GA	G	2269.11	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.608;DP=783;FS=3.061;HRun=1;HaplotypeScore=132.6852;InbreedingCoeff=0.9842;MQ=91.25;MQ0=0;MQRankSum=-4.615;QD=37.20;ReadPosRankSum=1.966;VQSLOD=3.3624;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,117,1866	0/0:13,0:13:36.12:0,36,575	0/0:30,0:30:88.85:0,89,1353	0/0:33,0:33:98.97:0,99,1486	0/0:23,0:23:69.22:0,69,1073	0/0:21,0:21:63.20:0,63,959	0/0:28,0:28:84.27:0,84,1317	0/0:28,0:28:84.28:0,84,1323	0/0:24,0:24:72.23:0,72,1127	0/0:33,0:33:96.31:0,96,1465	0/0:22,0:22:66.22:0,66,1034	0/0:34,0:34:99:0,99,1528	0/0:22,0:22:66.18:0,66,986	0/0:35,0:35:99:0,105,1636	0/0:34,0:34:99:0,102,1534	0/0:34,0:34:99:0,102,1558	1/1:0,34:34:96.32:1342,96,0	1/1:0,27:27:75.25:1049,75,0	0/0:13,0:13:36.12:0,36,576	0/0:23,0:23:69.22:0,69,1069	0/0:43,0:43:99:0,126,1984	0/0:28,0:28:84.29:0,84,1339	0/0:23,0:23:69.22:0,69,1077	0/0:41,1:42:84.48:0,84,1901	0/0:30,0:30:87.26:0,87,1325	0/0:26,0:26:78.27:0,78,1244	0/0:35,0:34:99:0,105,1669	0/0:5,0:5:12.04:0,12,192
chr10	53137068	.	GA	G	7105.99	PASS	AB=0.909;AC=30;AF=0.536;AN=56;BaseQRankSum=16.745;DP=619;FS=0.662;HRun=10;HaplotypeScore=89.5447;InbreedingCoeff=0.8281;MQ=77.65;MQ0=0;MQRankSum=0.205;QD=19.47;ReadPosRankSum=-1.399;VQSLOD=4.8450;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,1:25:45.97:0,46,718	0/0:11,0:11:3.14:0,3,235	0/1:19,2:20:23.77:24,0,223	0/0:16,0:16:7.09:0,7,201	1/1:5,34:39:92.95:807,93,0	1/1:4,25:29:68.98:599,69,0	1/1:6,19:25:53.99:469,54,0	0/0:42,0:42:96.20:0,96,1033	1/1:0,14:14:38.99:338,39,0	1/1:3,22:25:63.43:547,63,0	1/1:4,22:26:65.98:573,66,0	0/0:16,0:16:45.10:0,45,483	0/0:17,1:18:16.07:0,16,398	1/1:1,14:15:38.98:338,39,0	0/0:24,0:24:60.13:0,60,640	0/0:20,0:21:59.94:0,60,617	0/0:24,0:24:63.16:0,63,689	0/0:7,0:7:15.04:0,15,166	1/1:4,17:21:50.92:432,51,0	1/1:2,24:26:68.91:590,69,0	1/1:1,17:18:50.99:443,51,0	0/0:23,0:23:60.16:0,60,657	0/1:17,2:19:7.03:7,0,373	0/0:25,2:27:20.06:0,20,662	1/1:3,23:26:65.98:573,66,0	1/1:4,22:26:65.93:559,66,0	1/1:3,23:26:68.97:599,69,0	1/1:0,9:9:24:208,24,0
chr10	53137677	.	G	GTTTT	7125.13	PASS	AB=0.987;AC=21;AF=0.375;AN=56;BaseQRankSum=14.135;DP=725;FS=0.336;HRun=7;HaplotypeScore=171.2669;InbreedingCoeff=0.0811;MQ=61.33;MQ0=9;MQRankSum=-12.959;QD=16.46;ReadPosRankSum=0.868;VQSLOD=0.9395;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,110,1509	0/0:13,0:13:33.06:0,33,450	0/0:39,0:21:38.90:0,39,489	0/1:26,0:16:14.62:15,0,306	0/1:36,0:34:6.14:552,0,6	0/1:34,0:34:21.56:499,0,22	0/1:26,0:24:34.70:346,0,35	0/0:27,0:26:25.91:0,26,402	1/1:24,1:25:47.74:628,48,0	0/1:27,0:26:6.31:679,0,6	0/1:27,0:28:29.98:617,0,30	0/0:21,0:21:57.19:0,57,872	0/0:24,0:24:59.85:0,60,857	0/1:21,1:22:44.41:236,0,44	0/0:31,0:30:81.20:0,81,1128	0/0:24,0:24:53.98:0,54,715	0/1:29,0:29:41.86:281,0,42	0/1:14,0:14:0.98:176,0,1	0/1:35,0:35:90.54:455,0,91	1/1:28,1:29:14.99:704,15,0	0/1:15,0:13:47.90:174,0,48	0/0:18,0:18:38.53:0,39,590	0/0:22,0:22:51.10:0,51,721	0/0:23,0:23:53.88:0,54,774	0/1:25,1:25:2.11:449,0,2	0/1:26,0:26:16.60:572,0,17	1/1:26,2:29:7.62:706,8,0	1/1:4,0:4:3.48:36,3,0
chr10	53137681	.	T	TTTTG	12451.30	PASS	AB=1.000;AC=33;AF=0.589;AN=56;BaseQRankSum=3.922;DP=730;FS=6.902;HRun=0;HaplotypeScore=152.7113;InbreedingCoeff=0.9107;MQ=57.13;MQ0=14;MQRankSum=-9.522;QD=28.69;ReadPosRankSum=-0.346;VQSLOD=4.3189;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,111,1441	0/0:14,0:14:33.06:0,33,435	0/0:38,0:17:29.25:0,29,332	0/0:26,0:15:26.32:0,26,273	1/1:33,1:31:60.12:942,60,0	1/1:36,0:36:38.21:949,38,0	1/1:25,1:24:52.78:724,53,0	0/1:29,0:28:70.32:70,0,139	1/1:24,1:25:69.07:1020,69,0	1/1:18,8:25:65.93:1089,66,0	1/1:21,7:29:62.78:981,63,0	0/0:21,0:21:57.13:0,57,770	0/0:25,0:25:61.14:0,61,740	1/1:21,0:21:32.47:391,32,0	0/0:31,0:30:70.02:0,70,939	0/0:23,0:23:48.03:0,48,626	1/1:26,0:28:53.73:628,54,0	1/1:12,0:14:29.29:338,29,0	1/1:30,6:35:59.34:749,59,0	1/1:20,10:30:69:1152,69,0	1/1:12,2:12:24.06:456,24,0	0/0:20,0:20:51:0,51,668	0/0:23,0:23:51.96:0,52,683	0/0:23,0:23:50.89:0,51,719	1/1:23,1:23:50.83:740,51,0	1/1:19,7:27:67.54:1041,68,0	1/1:23,6:29:66.13:1116,66,0	1/1:4,0:3:5.93:65,6,0
chr10	53137689	.	G	GTTTGTT	13060.51	PASS	AB=0.894;AC=30;AF=0.536;AN=56;BaseQRankSum=2.982;DP=712;FS=7.773;HRun=0;HaplotypeScore=172.6168;InbreedingCoeff=0.6970;MQ=50.51;MQ0=16;MQRankSum=-9.868;QD=30.95;ReadPosRankSum=1.036;VQSLOD=4.2146;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:53:95.05:0,95,1907	0/0:12,0:13:33.05:0,33,605	0/0:33,0:12:24.51:0,25,356	0/0:25,0:14:24.86:0,25,265	1/1:22,8:31:69.67:1480,70,0	1/1:24,5:35:76.68:1539,77,0	1/1:18,1:23:45.40:896,45,0	0/1:12,0:26:99:124,0,149	1/1:14,6:27:78.01:1547,78,0	1/1:24,0:25:32.23:753,32,0	1/1:30,0:31:27.19:724,27,0	0/0:21,0:21:57.13:0,57,919	0/0:21,0:24:63.86:0,64,944	1/1:15,0:17:41.43:736,41,0	0/0:30,0:32:74.42:0,74,1188	0/0:16,0:20:48.03:0,48,802	1/1:26,0:27:17.14:727,17,0	1/1:13,0:13:24.38:520,24,0	0/1:31,0:32:98.75:435,0,99	1/1:29,0:30:15.09:771,15,0	0/1:12,0:10:21.17:273,0,21	0/0:19,0:21:50.91:0,51,874	0/0:22,0:23:55.01:0,55,913	0/0:19,0:22:51.07:0,51,943	1/1:12,1:22:53.80:990,54,0	0/1:26,0:28:29.92:671,0,30	1/1:25,0:27:64.62:823,65,0	1/1:4,0:3:6.87:51,7,0
chr10	53137690	.	T	TTTG	8928.52	PASS	AB=0.972;AC=30;AF=0.536;AN=56;BaseQRankSum=5.882;DP=714;FS=0.310;HRun=0;HaplotypeScore=147.7965;InbreedingCoeff=0.6666;MQ=50.43;MQ0=16;MQRankSum=-7.401;QD=21.11;ReadPosRankSum=3.636;VQSLOD=4.4073;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:53:99:0,121,1565	0/0:13,0:13:33.04:0,33,475	0/0:33,0:12:29.84:0,30,323	0/0:26,0:14:26.40:0,26,294	1/1:33,1:31:25.89:672,26,0	1/1:35,0:35:11.37:725,11,0	1/1:24,0:22:31.27:522,31,0	0/1:27,0:26:99:145,0,130	1/1:27,0:27:70.60:832,71,0	1/1:26,0:25:8.65:649,9,0	1/1:32,0:31:11.66:642,12,0	0/0:22,0:22:57.13:0,57,764	0/0:24,0:24:64.62:0,65,772	1/1:16,1:17:31.70:365,32,0	0/0:33,0:32:58.61:0,59,963	0/0:20,0:20:47.97:0,48,588	1/1:28,0:28:15.09:472,15,0	1/1:14,0:13:24.39:285,24,0	0/1:33,0:32:99:446,0,142	1/1:30,1:31:6.70:776,7,0	0/1:11,1:10:28.39:274,0,28	0/0:21,0:21:50.36:0,50,669	0/0:23,0:23:55.02:0,55,759	0/0:22,0:22:51.07:0,51,745	1/1:23,0:22:47.38:569,47,0	0/1:27,1:28:60.03:622,0,60	1/1:24,3:27:52.67:892,53,0	1/1:4,0:3:6.36:38,6,0
chr10	53137708	.	CT	C	4190.78	PASS	AB=0.680;AC=31;AF=0.574;AN=54;BaseQRankSum=7.187;DP=610;FS=8.902;HRun=9;HaplotypeScore=120.7090;InbreedingCoeff=0.8614;MQ=46.61;MQ0=13;MQRankSum=-6.462;QD=12.25;ReadPosRankSum=1.565;VQSLOD=2.3317;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:46:99:0,109,1215	0/0:13,0:13:33.09:0,33,373	0/0:12,0:3:0:0,0,0	./.	1/1:17,20:35:23.42:381,23,0	1/1:11,12:23:35.59:328,36,0	1/1:9,9:15:12.49:132,12,0	0/0:26,0:25:45.09:0,45,504	1/1:14,7:21:18.48:184,18,0	1/1:5,17:22:50.81:460,51,0	1/1:8,17:24:29.80:273,30,0	0/0:15,0:15:33.02:0,33,336	0/0:20,1:21:17.20:0,17,387	0/1:9,8:17:17.60:138,0,18	0/0:28,1:28:35.47:0,35,603	0/0:19,0:19:39.08:0,39,417	1/1:10,14:23:29.85:261,30,0	1/1:7,4:10:17.38:145,17,0	1/1:11,14:23:38.96:357,39,0	1/1:7,23:29:50.88:460,51,0	1/1:3,9:12:18:165,18,0	0/0:27,0:28:69.18:0,69,775	0/0:17,0:18:35.92:0,36,375	0/0:22,0:22:45.12:0,45,511	1/1:7,12:18:8.74:152,9,0	1/1:7,18:25:50.73:446,51,0	1/1:14,14:28:13.37:254,13,0	1/1:3,2:3:5.98:55,6,0
chr10	53140059	.	CT	C	1227.94	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-1.114;DP=691;FS=1.321;HRun=4;HaplotypeScore=87.1752;InbreedingCoeff=0.9697;MQ=56.53;MQ0=4;MQRankSum=2.429;QD=29.24;ReadPosRankSum=-4.058;VQSLOD=1.5882;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,111,1535	0/0:11,0:11:30.09:0,30,403	0/0:34,0:20:51.06:0,51,640	0/0:27,0:20:48.16:0,48,658	0/0:21,0:21:54.14:0,54,719	0/0:21,0:21:60.18:0,60,821	0/0:24,0:24:69.23:0,69,966	1/1:3,39:42:99:1323,114,0	0/0:19,0:19:57.19:0,57,798	0/0:25,0:25:72.20:0,72,986	0/0:14,0:13:39.12:0,39,529	0/0:28,0:28:81.26:0,81,1117	0/0:25,0:25:69.23:0,69,956	0/0:28,0:28:81.26:0,81,1119	0/0:31,0:31:90.29:0,90,1244	0/0:29,0:29:81.27:0,81,1134	0/0:34,0:34:96.26:0,96,1294	0/0:26,0:25:68.70:0,69,916	0/0:17,0:14:42.10:0,42,566	0/0:22,0:22:66.21:0,66,907	0/0:31,0:31:93.31:0,93,1302	0/0:20,0:20:54.18:0,54,751	0/0:15,0:15:45.15:0,45,630	0/0:29,0:29:87.25:0,87,1189	0/0:30,0:30:87.28:0,87,1202	0/0:24,0:24:69.22:0,69,952	0/0:20,0:20:57.19:0,57,788	0/0:5,0:5:12.04:0,12,168
chr10	53140340	.	G	GGA	781.85	PASS	AB=1.000;AC=36;AF=0.720;AN=50;BaseQRankSum=1.746;DP=379;FS=3.618;HRun=0;HaplotypeScore=89.9970;InbreedingCoeff=0.3612;MQ=60.26;MQ0=11;MQRankSum=-0.417;QD=3.27;ReadPosRankSum=-3.371;VQSLOD=1.2030;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:26:13.81:14,0,223	0/1:3,0:2:0:0,0,0	./.	./.	1/1:9,0:8:6.02:78,6,0	1/1:14,0:14:8.99:76,9,0	1/1:17,0:17:3.22:13,3,0	0/0:18,0:18:5.94:0,6,41	1/1:15,0:15:14.98:132,15,0	1/1:12,0:12:9.83:59,10,0	./.	0/0:11,1:12:2.87:0,3,25	0/1:11,0:11:17.86:77,0,18	0/1:13,0:13:0:0,0,0	0/0:11,0:16:11.36:0,11,56	0/0:15,0:15:11.51:0,12,65	1/1:11,0:11:9.44:54,9,0	1/1:13,0:12:5.74:35,6,0	1/1:8,0:8:8.36:49,8,0	1/1:7,0:7:3:25,3,0	1/1:15,0:15:2.88:15,3,0	1/1:13,0:14:6.01:69,6,0	1/1:6,0:7:3.01:32,3,0	0/0:11,5:16:2.65:0,3,14	1/1:15,0:15:3.01:40,3,0	1/1:12,0:11:14.57:110,15,0	1/1:12,0:12:3:26,3,0	1/1:5,0:3:2.94:18,3,0
chr10	53140528	.	AT	A	9364.81	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=10.418;DP=603;FS=3.315;HRun=8;HaplotypeScore=61.5653;InbreedingCoeff=0.9939;MQ=80.46;MQ0=0;MQRankSum=1.329;QD=25.17;ReadPosRankSum=1.390;VQSLOD=5.8016;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:63.19:0,63,760	0/0:10,0:10:24.07:0,24,290	0/0:20,0:20:22.79:0,23,474	0/0:15,0:15:25.84:0,26,274	1/1:0,29:29:78.12:753,78,0	1/1:0,25:25:69.11:666,69,0	1/1:1,10:11:27.04:261,27,0	1/1:5,27:32:81.12:782,81,0	1/1:2,23:25:63.10:608,63,0	1/1:3,21:24:63.10:608,63,0	1/1:6,23:29:63.09:608,63,0	0/0:23,0:23:66.20:0,66,797	0/0:35,0:35:67.51:0,68,1092	1/1:0,18:18:51.08:492,51,0	0/0:21,0:21:60.17:0,60,714	0/0:22,0:22:66.19:0,66,787	1/1:0,15:15:42.07:406,42,0	1/1:1,20:21:57.09:550,57,0	1/1:3,17:20:51.06:486,51,0	1/1:1,24:25:72.11:695,72,0	1/1:1,25:26:72.12:695,72,0	0/0:17,0:17:51.15:0,51,602	0/0:23,0:23:54.17:0,54,651	0/0:20,0:20:57.17:0,57,689	1/1:1,22:23:60.10:579,60,0	1/1:3,17:20:51.05:485,51,0	1/1:1,20:21:57.09:550,57,0	1/1:1,7:8:11.39:139,11,0
chr10	53140684	.	C	CA	7440.88	PASS	AB=0.563;AC=31;AF=0.554;AN=56;BaseQRankSum=7.243;DP=668;FS=0.000;HRun=10;HaplotypeScore=97.7239;InbreedingCoeff=0.8898;MQ=68.86;MQ0=3;MQRankSum=-0.976;QD=19.95;ReadPosRankSum=1.403;VQSLOD=5.1037;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:43.18:0,43,348	0/0:8,0:8:20.96:0,21,172	0/0:38,1:27:52.53:0,53,381	0/0:27,0:21:34.39:0,34,242	0/1:4,13:18:10.35:296,0,10	1/1:5,23:29:69:715,69,0	1/1:6,9:15:29.66:298,30,0	0/0:34,0:34:61.13:0,61,555	1/1:3,19:22:51.13:542,51,0	1/1:10,21:31:19.84:610,20,0	1/1:7,24:30:60.08:614,60,0	0/0:26,0:26:68.90:0,69,566	0/0:30,0:30:74.88:0,75,613	1/1:4,19:24:44.23:494,44,0	0/0:22,0:22:53.92:0,54,443	0/0:21,0:21:51.38:0,51,419	1/1:30,0:30:66.91:277,67,0	1/1:12,0:12:21.43:88,21,0	1/1:6,23:29:19.83:600,20,0	1/1:4,12:20:19.81:352,20,0	1/1:8,11:19:11.44:327,11,0	0/0:21,1:22:21.93:0,22,387	0/0:22,2:24:0.32:0,0,402	0/0:22,0:23:64.96:0,65,524	1/1:2,18:21:53.94:547,54,0	1/1:2,23:25:69.17:735,69,0	1/1:4,30:34:41.48:635,41,0	1/1:0,13:13:30.06:312,30,0
chr10	53140685	.	A	AAC	1643.34	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=-0.913;DP=683;FS=4.475;HRun=0;HaplotypeScore=134.9146;InbreedingCoeff=0.7756;MQ=69.23;MQ0=3;MQRankSum=-1.011;QD=25.28;ReadPosRankSum=0.786;VQSLOD=4.6946;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:48.15:0,48,705	0/0:10,0:10:24.06:0,24,345	0/0:42,0:28:67.58:0,68,768	0/0:27,0:21:28.49:0,28,432	0/0:20,0:20:18.89:0,19,245	0/0:30,0:30:51.54:0,52,273	0/0:16,0:16:26.94:0,27,152	0/0:34,0:34:96.24:0,96,1296	0/0:22,0:22:44.29:0,44,168	0/0:33,0:33:65.86:0,66,486	0/0:31,0:30:61.62:0,62,325	0/0:26,0:26:78.24:0,78,1135	0/0:31,0:31:81.25:0,81,1184	0/0:24,0:24:50.89:0,51,247	0/0:22,0:22:63.18:0,63,902	0/0:20,0:20:60.16:0,60,857	1/1:1,28:31:75.25:1278,75,0	1/1:1,12:14:27.09:466,27,0	0/0:30,0:30:68.80:0,69,388	0/1:20,0:20:29:29,0,143	0/0:19,0:19:52.56:0,53,331	0/0:22,0:22:65.72:0,66,881	0/0:24,0:24:65.28:0,65,901	0/0:23,0:23:69.01:0,69,1001	0/0:21,0:21:30.13:0,30,192	0/0:26,0:26:59.19:0,59,221	0/0:34,0:34:56.83:0,57,262	0/0:13,0:13:23.64:0,24,87
chr10	53142680	.	T	TAC	1579.06	PASS	AB=0.789;AC=17;AF=0.327;AN=52;BaseQRankSum=-3.077;DP=558;FS=1.283;HRun=0;HaplotypeScore=77.8603;InbreedingCoeff=0.4382;MQ=58.28;MQ0=13;MQRankSum=-0.428;QD=7.59;ReadPosRankSum=-1.207;VQSLOD=3.1873;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:43.96:0,44,451	0/0:5,0:5:5.99:0,6,56	./.	./.	0/0:15,0:15:18.04:0,18,195	0/0:24,0:24:36.78:0,37,389	0/0:21,0:21:24.05:0,24,255	1/1:32,0:32:8.93:64,9,0	0/0:18,0:21:31.73:0,32,317	1/1:15,2:17:6.85:207,7,0	1/1:8,9:17:17.79:217,18,0	0/0:22,0:23:24.10:0,24,226	0/0:16,0:19:30.06:0,30,323	0/0:26,0:28:32.08:0,32,369	0/0:25,0:27:38.58:0,39,362	0/0:15,0:17:20.85:0,21,201	0/1:17,7:25:67.88:281,0,68	1/1:6,4:12:6.02:90,6,0	0/1:15,1:15:19.16:72,0,19	1/1:9,10:19:24.08:340,24,0	0/1:14,11:24:45.02:163,0,45	0/0:7,0:7:3:0,3,26	0/0:14,0:15:17.87:0,18,177	0/0:17,0:17:29.91:0,30,312	0/0:13,0:14:23.90:0,24,246	0/1:15,4:19:17.93:131,0,18	0/1:13,8:21:18.52:165,0,19	1/1:4,0:2:2.98:22,3,0
chr10	53143396	.	AG	A	12801.69	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=16.406;DP=790;FS=0.263;HRun=4;HaplotypeScore=78.7725;InbreedingCoeff=0.9999;MQ=89.83;MQ0=0;MQRankSum=-4.388;QD=33.25;ReadPosRankSum=3.432;VQSLOD=5.3951;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,108,1510	0/0:12,0:12:36.11:0,36,489	0/0:35,0:35:97.92:0,98,1298	0/0:29,0:28:78.12:0,78,1048	1/1:0,28:28:78.24:936,78,0	1/1:3,13:16:36.11:432,36,0	1/1:0,33:33:93.29:1115,93,0	0/0:42,0:42:99:0,117,1638	1/1:1,25:26:66.20:792,66,0	1/1:0,22:22:66.19:781,66,0	1/1:0,19:19:57.17:684,57,0	0/0:33,0:33:96.32:0,96,1338	0/0:35,0:35:96.32:0,96,1342	1/1:0,38:38:99:1332,111,0	0/0:33,0:33:99:0,99,1383	0/0:30,0:30:90.30:0,90,1259	0/0:21,0:21:60.20:0,60,838	0/0:10,0:10:30.10:0,30,419	1/1:0,27:27:81.25:972,81,0	1/1:0,36:36:99:1260,105,0	1/1:1,38:39:99:1260,105,0	0/0:31,0:31:93.30:0,93,1285	0/0:26,0:26:78.25:0,78,1074	0/0:31,0:31:93.30:0,93,1286	1/1:0,24:24:69.21:828,69,0	1/1:1,24:25:72.17:837,72,0	1/1:2,33:35:89.94:1069,90,0	1/1:0,17:17:42.13:504,42,0
chr10	53145976	.	C	CAAA	8400.24	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-1.704;DP=690;FS=0.694;HRun=9;HaplotypeScore=104.0682;InbreedingCoeff=0.9927;MQ=77.10;MQ0=0;MQRankSum=-1.499;QD=32.94;ReadPosRankSum=-3.328;VQSLOD=3.4650;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:54.09:0,54,682	0/0:10,0:10:30.10:0,30,379	0/0:23,0:22:32.59:0,33,403	0/0:16,0:17:27.47:0,27,379	0/0:25,0:28:81.04:0,81,962	0/0:32,0:32:93.29:0,93,1175	0/0:17,0:18:43.71:0,44,565	0/0:5,0:23:53.74:0,54,321	0/0:26,0:26:75.23:0,75,946	1/1:6,20:29:69.16:1163,69,0	1/1:6,21:33:46.33:1230,46,0	0/0:27,0:27:72.19:0,72,896	0/0:33,0:33:90.28:0,90,1136	0/0:24,0:26:61.67:0,62,773	0/0:20,0:21:55.75:0,56,717	0/0:21,0:21:57.15:0,57,719	1/1:4,1:22:44.85:381,45,0	1/1:2,0:10:14.94:115,15,0	1/1:4,15:28:73.41:1176,73,0	1/1:3,20:26:70.40:1211,70,0	1/1:4,12:21:40.29:586,40,0	0/0:14,0:14:36.06:0,36,441	0/0:27,0:27:75.21:0,75,946	0/0:34,0:36:96.22:0,96,1192	0/0:26,0:27:66.10:0,66,813	1/1:8,5:26:62.40:910,62,0	1/1:7,32:43:81.21:1457,81,0	1/1:4,1:16:12.04:172,12,0
chr10	53146229	.	C	CTCTA	4269.32	PASS	AC=20;AF=0.385;AN=52;BaseQRankSum=-9.331;DP=585;FS=4.488;HRun=0;HaplotypeScore=103.0912;InbreedingCoeff=0.8997;MQ=72.36;MQ0=6;MQRankSum=2.904;QD=19.32;ReadPosRankSum=-1.680;VQSLOD=4.2751;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:18,12:29:32.46:661,32,0	0/0:15,0:15:12.04:0,12,183	./.	./.	1/1:12,15:28:39.13:890,39,0	1/1:19,8:27:18.06:418,18,0	1/1:9,3:12:9.03:209,9,0	1/1:38,0:38:1.25:3,1,0	1/1:9,5:15:15.05:349,15,0	0/0:15,0:28:39.04:0,39,362	0/0:10,0:15:12.01:0,12,112	0/0:18,0:18:24.08:0,24,365	1/1:8,8:16:24.08:546,24,0	0/0:19,0:19:30.09:0,30,433	0/0:23,0:23:21.07:0,21,320	0/0:18,0:18:21.07:0,21,318	0/0:12,0:19:3:0,3,28	0/0:5,0:13:9.90:0,10,85	1/1:13,8:21:24.08:527,24,0	0/0:23,0:23:21.07:0,21,320	0/0:21,0:21:24.06:0,24,344	0/0:15,0:15:21.06:0,21,297	0/0:16,0:16:21.06:0,21,299	1/1:7,4:12:9.03:193,9,0	1/1:11,9:22:21.07:474,21,0	0/0:18,0:26:24.03:0,24,224	0/0:27,0:27:39.12:0,39,571	0/0:11,0:19:21.01:0,21,196
chr10	53146551	.	A	AG	558.55	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-5.711;DP=547;FS=10.670;HRun=6;HaplotypeScore=74.7356;InbreedingCoeff=0.9864;MQ=63.42;MQ0=8;MQRankSum=-1.763;QD=23.27;ReadPosRankSum=-3.540;VQSLOD=1.4497;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:33:80.51:0,81,812	0/0:9,0:9:18.04:0,18,183	0/0:24,0:13:22.93:0,23,224	0/0:32,0:17:45.07:0,45,444	0/0:19,0:19:48.10:0,48,483	0/0:18,0:18:44.33:0,44,439	0/0:27,0:27:60.06:0,60,597	1/1:3,21:24:57.09:653,57,0	0/0:24,0:23:48.11:0,48,488	0/0:20,0:20:54.12:0,54,550	0/0:16,0:16:36:0,36,353	0/0:12,0:12:30.07:0,30,305	0/0:19,0:19:54.12:0,54,547	0/0:13,0:13:30.07:0,30,305	0/0:15,0:15:35.98:0,36,367	0/0:13,0:13:33.07:0,33,337	0/0:24,0:24:57.09:0,57,568	0/0:15,0:15:36.08:0,36,367	0/0:21,0:21:48.09:0,48,484	0/0:20,0:20:41.97:0,42,431	0/0:15,0:13:38.98:0,39,374	0/0:19,0:19:54.11:0,54,545	0/0:19,0:19:54.11:0,54,546	0/0:24,0:24:54.05:0,54,527	0/0:11,0:11:27.02:0,27,265	0/0:27,0:24:57.13:0,57,581	0/0:17,0:17:39.09:0,39,397	0/0:16,0:16:35.45:0,35,366
chr10	53146563	.	GGAGAGAGA	G	115.92	PASS	AB=0.857;AC=7;AF=0.140;AN=50;BaseQRankSum=1.969;DP=539;FS=23.363;HRun=0;HaplotypeScore=135.2664;InbreedingCoeff=0.4668;MQ=58.02;MQ0=13;MQRankSum=-2.655;QD=1.45;ReadPosRankSum=0.231;VQSLOD=1.2279;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:9:0,9,86	0/0:7,0:7:9.03:0,9,168	./.	./.	./.	1/1:18,0:18:1.81:70,2,0	1/1:19,4:23:3:71,3,0	0/0:26,0:26:21.12:0,21,362	1/1:21,6:26:3.01:75,3,0	0/0:19,0:19:21.54:0,22,586	0/0:19,0:19:2.99:0,3,24	0/0:12,0:11:15.05:0,15,402	0/0:23,0:22:39.13:0,39,1037	0/1:10,0:12:9.88:10,0,29	0/0:16,0:16:17.69:0,18,336	0/0:11,0:11:20.26:0,20,339	0/0:21,0:21:27.96:0,28,715	0/0:14,0:14:9.03:0,9,142	0/0:18,0:17:3.01:0,3,101	0/0:21,0:21:21.05:0,21,470	0/0:18,0:15:6.02:0,6,191	0/0:18,0:18:18.06:0,18,345	0/0:17,0:17:18.06:0,18,352	0/0:20,0:22:33.57:0,34,760	0/0:10,0:9:0.47:0,0,1	0/0:34,0:31:45.15:0,45,1047	0/0:16,0:15:15.01:0,15,301	0/0:17,0:17:24.08:0,24,606
chr10	53146832	.	T	TG	7295.69	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-12.974;DP=831;FS=2.118;HRun=5;HaplotypeScore=77.4706;InbreedingCoeff=0.9783;MQ=71.84;MQ0=0;MQRankSum=-1.800;QD=34.91;ReadPosRankSum=-0.656;VQSLOD=4.5607;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:69,0:69:99:0,189,2031	0/0:8,0:8:21.05:0,21,226	0/0:21,1:22:4.99:0,5,428	0/0:17,0:18:39.09:0,39,418	0/0:29,0:29:78.18:0,78,829	0/0:30,0:30:81.20:0,81,870	0/0:35,0:35:90.21:0,90,958	0/0:32,0:32:90.19:0,90,951	0/0:30,0:30:78.19:0,78,838	1/1:3,35:38:99:1285,102,0	1/1:1,17:18:48.16:629,48,0	0/0:30,0:30:87.22:0,87,935	0/0:32,0:32:87.20:0,87,926	0/0:32,0:32:87.19:0,87,919	0/0:39,0:39:99:0,99,1064	0/0:28,0:28:78.19:0,78,838	0/0:32,0:32:93.23:0,93,1000	0/0:23,0:23:66.17:0,66,708	1/1:4,23:27:69.19:887,69,0	1/1:0,28:28:78.25:1025,78,0	1/1:1,33:34:96.31:1262,96,0	0/0:40,0:40:99:0,114,1197	0/0:26,0:26:72.18:0,72,774	0/0:38,0:38:99:0,114,1217	0/0:29,0:29:84.21:0,84,903	1/1:5,26:30:75.24:987,75,0	1/1:1,21:23:66.21:867,66,0	1/1:1,9:10:27.09:353,27,0
chr10	53149922	.	AC	A	1849.22	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.828;DP=857;FS=1.834;HRun=1;HaplotypeScore=78.6346;InbreedingCoeff=0.9919;MQ=89.13;MQ0=0;MQRankSum=-2.181;QD=34.24;ReadPosRankSum=0.922;VQSLOD=3.5219;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:46:99:0,141,2146	0/0:14,0:14:42.13:0,42,635	0/0:32,0:32:96.25:0,96,1392	0/0:31,0:31:73.39:0,73,1213	0/0:30,0:30:87.29:0,87,1355	0/0:41,0:41:99:0,123,1874	0/0:29,0:29:87.30:0,87,1361	0/0:37,0:37:99:0,111,1710	0/0:44,0:44:99:0,132,2041	0/0:30,0:30:90.28:0,90,1336	0/0:16,0:16:48.12:0,48,703	0/0:31,0:31:93.27:0,93,1386	0/0:50,0:50:99:0,147,2297	0/0:32,0:32:96.31:0,96,1479	0/0:35,0:35:99:0,105,1588	0/0:38,0:38:99:0,114,1714	1/1:0,31:31:78.26:1091,78,0	1/1:0,23:23:63.21:880,63,0	0/0:16,0:16:48.16:0,48,740	0/0:40,0:40:99:0,120,1789	0/0:47,0:47:99:0,138,2130	0/0:28,0:28:84.27:0,84,1279	0/0:22,0:22:66.22:0,66,1024	0/0:34,0:34:99:0,102,1591	0/0:18,0:18:48.15:0,48,729	0/0:31,0:31:93.32:0,93,1455	0/0:25,0:24:75.21:0,75,1105	0/0:5,0:5:15.05:0,15,234
chr10	53154645	.	CG	C	727.93	PASS	AB=0.933;AC=17;AF=0.850;AN=20;BaseQRankSum=-2.565;DP=115;FS=7.040;HRun=1;HaplotypeScore=60.0585;InbreedingCoeff=-0.1621;MQ=85.98;MQ0=7;MQRankSum=-1.492;QD=6.56;ReadPosRankSum=3.405;VQSLOD=0.7423;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,1:8:14.94:127,15,0	1/1:4,0:4:9:80,9,0	0/1:23,0:9:12.13:12,0,73	0/1:33,3:14:5:51,0,5	./.	./.	./.	./.	./.	./.	./.	1/1:3,0:3:6:51,6,0	1/1:8,0:8:8.99:76,9,0	./.	0/1:6,1:7:7.01:121,0,7	1/1:11,0:11:21.07:159,21,0	./.	./.	./.	./.	./.	./.	1/1:3,2:5:5.93:46,6,0	1/1:6,0:6:11.93:93,12,0	./.	./.	./.	./.
chr10	53154665	.	TC	T	1112.41	PASS	AC=16;AF=0.800;AN=20;BaseQRankSum=-3.085;DP=227;FS=10.593;HRun=5;HaplotypeScore=58.5413;InbreedingCoeff=0.7867;MQ=71.89;MQ0=36;MQRankSum=-3.102;QD=17.38;ReadPosRankSum=2.650;VQSLOD=2.2862;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,12:12:24.07:272,24,0	1/1:1,4:5:6.01:64,6,0	0/0:62,0:15:29.89:0,30,280	0/0:70,0:20:28.25:0,28,278	./.	./.	./.	./.	./.	./.	./.	1/1:1,3:4:9.03:102,9,0	1/1:1,8:9:15.04:170,15,0	./.	1/1:1,6:7:15.04:170,15,0	1/1:3,10:12:24.07:271,24,0	./.	./.	./.	./.	./.	1/1:2,2:3:3.01:34,3,0	1/1:0,10:10:12.03:136,12,0	./.	./.	./.	./.	./.
chr10	53155140	.	TC	T	5489.09	PASS	AB=0.839;AC=38;AF=0.679;AN=56;BaseQRankSum=7.035;DP=467;FS=3.175;HRun=10;HaplotypeScore=58.3970;InbreedingCoeff=0.5908;MQ=72.58;MQ0=0;MQRankSum=-2.014;QD=14.92;ReadPosRankSum=2.221;VQSLOD=5.2672;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:23,2:25:4.01:4,0,404	0/1:4,1:5:14.35:14,0,66	0/1:16,0:13:0.30:0,0,157	0/1:7,1:7:3.67:19,0,4	1/1:3,11:14:26.98:234,27,0	1/1:1,17:18:44.99:391,45,0	1/1:9,21:30:59.96:521,60,0	1/1:6,16:22:35.94:307,36,0	1/1:3,11:14:32.99:286,33,0	1/1:2,12:14:29.98:259,30,0	1/1:2,7:10:20.03:162,20,0	0/0:22,3:25:4.85:0,5,459	0/0:16,1:17:16.03:0,16,382	1/1:4,14:19:40.99:345,41,0	0/1:10,2:12:24.90:25,0,205	0/0:15,0:15:30.07:0,30,324	1/1:8,18:27:62.47:523,62,0	1/1:1,11:12:26.98:234,27,0	1/1:5,8:13:23.99:208,24,0	1/1:6,11:17:29.97:260,30,0	1/1:5,27:32:68.96:598,69,0	0/0:9,0:9:19.96:0,20,251	0/0:10,0:10:21.04:0,21,223	0/0:22,1:23:31.11:0,31,571	1/1:1,14:16:32.03:266,32,0	1/1:3,14:17:38.97:337,39,0	1/1:3,14:17:35.98:312,36,0	0/1:1,9:10:6.18:181,0,6
chr10	53157966	.	C	CTG	3607.39	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-11.926;DP=689;FS=11.570;HRun=0;HaplotypeScore=78.0486;InbreedingCoeff=0.9999;MQ=83.86;MQ0=1;MQRankSum=-2.897;QD=48.75;ReadPosRankSum=-2.860;VQSLOD=3.2507;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:35:89.75:0,90,1345	0/0:14,0:14:42.11:0,42,581	0/0:21,0:21:53.65:0,54,712	0/0:23,0:23:63.21:0,63,896	0/0:34,0:34:87.29:0,87,1244	0/0:28,0:28:81.27:0,81,1160	0/0:22,0:22:63.21:0,63,903	1/1:3,34:37:99:1841,102,0	0/0:26,0:26:78.25:0,78,1098	0/0:32,0:32:81.27:0,81,1145	0/0:19,0:19:57.19:0,57,816	0/0:29,0:29:81.26:0,81,1143	0/0:23,0:23:63.21:0,63,902	0/0:22,0:22:60.20:0,60,859	0/0:32,0:32:90.28:0,90,1252	0/0:26,0:26:75.24:0,75,1058	1/1:0,16:17:48.16:880,48,0	1/1:2,18:19:50.54:886,51,0	0/0:18,0:18:48.15:0,48,655	0/0:21,0:21:63.20:0,63,886	0/0:28,0:28:84.28:0,84,1204	0/0:25,0:25:75.25:0,75,1074	0/0:24,0:24:66.22:0,66,945	0/0:18,0:18:42.12:0,42,583	0/0:28,0:28:72.24:0,72,1031	0/0:31,0:31:87.28:0,87,1230	0/0:23,0:23:69.23:0,69,986	0/0:12,0:12:36.11:0,36,497
chr10	53162481	.	C	CG	4120.48	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-8.010;DP=666;FS=16.835;HRun=7;HaplotypeScore=70.5293;InbreedingCoeff=0.9901;MQ=89.83;MQ0=1;MQRankSum=-3.131;QD=25.91;ReadPosRankSum=1.465;VQSLOD=2.4976;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:78.12:0,78,752	0/0:5,0:5:11.98:0,12,107	0/0:29,0:28:67.96:0,68,623	0/0:27,0:27:65.08:0,65,596	0/0:25,0:25:63.07:0,63,596	0/0:21,0:21:54.08:0,54,520	0/0:33,0:33:90.13:0,90,868	0/0:26,0:26:50.94:0,51,469	0/0:25,0:25:60.09:0,60,579	1/1:3,13:16:39.12:471,39,0	1/1:4,14:18:42.13:507,42,0	0/0:23,0:23:45.05:0,45,433	0/0:38,0:38:96.13:0,96,921	0/0:20,0:20:51.06:0,51,487	0/0:23,0:23:60.09:0,60,579	0/0:18,0:18:54.09:0,54,521	0/0:36,0:36:87.12:0,87,835	0/0:27,0:27:75.06:0,75,712	1/1:5,13:18:13.21:441,13,0	1/1:4,17:21:33.10:398,33,0	1/1:5,23:27:51.01:616,51,0	0/0:24,0:24:51.08:0,51,492	0/0:26,0:26:63.08:0,63,602	0/0:33,0:33:90.12:0,90,863	0/0:16,0:16:42.01:0,42,394	1/1:6,22:28:66.19:786,66,0	1/1:1,21:21:54.16:648,54,0	1/1:0,8:8:21.06:254,21,0
chr10	53163202	.	CTCTG	C	1030.52	PASS	AB=1.000;AC=24;AF=0.444;AN=54;BaseQRankSum=1.739;DP=292;FS=1.892;HRun=0;HaplotypeScore=56.0440;InbreedingCoeff=0.3438;MQ=64.48;MQ0=19;MQRankSum=0.101;QD=7.93;ReadPosRankSum=-2.248;VQSLOD=1.6234;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:36.10:0,36,835	0/1:4,0:4:14.18:14,0,131	0/0:18,0:4:6.45:0,6,84	0/0:37,0:15:7.80:0,8,48	./.	1/1:1,9:10:6.02:114,6,0	1/1:2,2:4:2.99:24,3,0	0/0:27,0:21:27.57:0,28,602	1/1:0,3:3:3.01:57,3,0	1/1:12,0:12:20.26:126,20,0	1/1:7,0:7:5.95:44,6,0	0/0:9,0:9:24.08:0,24,564	0/0:2,0:2:6.02:0,6,146	1/1:1,11:12:9.03:171,9,0	0/0:3,0:3:9.03:0,9,194	0/0:7,0:7:18.06:0,18,446	0/1:10,0:10:14.49:14,0,64	0/0:5,0:5:3.84:0,4,21	0/1:14,0:14:49.72:117,0,50	0/1:6,0:6:24.65:30,0,25	0/1:13,0:13:71.63:112,0,72	0/0:11,0:11:26.93:0,27,259	0/0:11,0:10:21.07:0,21,467	0/0:4,0:4:6:0,6,97	1/1:1,7:8:3.01:57,3,0	1/1:3,4:5:11.91:114,12,0	0/1:10,0:10:45.64:104,0,46	1/1:9,1:10:13.85:112,14,0
chr10	53163204	.	CTG	C	1444.51	PASS	AB=1.000;AC=28;AF=0.519;AN=54;BaseQRankSum=3.231;DP=286;FS=1.790;HRun=0;HaplotypeScore=47.7392;InbreedingCoeff=0.5997;MQ=64.77;MQ0=19;MQRankSum=0.489;QD=9.69;ReadPosRankSum=-1.705;VQSLOD=2.8951;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:38.47:0,38,631	0/0:4,0:4:8.98:0,9,111	0/0:19,0:5:5.98:0,6,59	0/0:34,1:15:0.43:0,0,10	./.	1/1:10,0:10:5.92:39,6,0	1/1:4,0:4:2.99:24,3,0	0/1:26,0:20:21.75:22,0,309	1/1:3,0:3:2.96:19,3,0	1/1:2,9:11:20.59:222,21,0	1/1:7,1:8:9:94,9,0	0/0:9,0:9:24.07:0,24,372	0/0:2,0:2:6.02:0,6,97	1/1:12,0:12:8.87:58,9,0	0/0:3,0:3:9.01:0,9,121	0/0:6,0:6:18.06:0,18,302	0/1:10,0:10:31.38:50,0,31	0/0:4,0:4:0.88:0,1,2	1/1:12,1:13:23.28:252,23,0	1/1:6,0:6:9.90:116,10,0	1/1:13,0:13:25.87:266,26,0	0/0:11,0:11:9.47:0,9,93	0/0:11,0:10:21.04:0,21,299	0/0:4,0:4:6:0,6,72	1/1:7,0:7:2.96:19,3,0	1/1:6,0:4:11.91:95,12,0	1/1:9,1:10:19.47:250,19,0	1/1:9,1:10:13.79:105,14,0
chr10	53163285	.	GTGTCTCTCTC	G	942.44	PASS	AB=0.760;AC=11;AF=0.306;AN=36;BaseQRankSum=3.448;DP=166;FS=5.821;HRun=0;HaplotypeScore=64.8773;InbreedingCoeff=0.4163;MQ=71.51;MQ0=3;MQRankSum=-3.417;QD=11.93;ReadPosRankSum=1.653;VQSLOD=0.8711;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:7:6.02:0,6,290	./.	0/0:23,0:13:0.89:0,1,2	0/1:31,0:18:1.24:1,0,43	0/0:5,0:5:9.03:0,9,443	0/0:6,0:6:12.04:0,12,436	0/0:4,0:4:9.03:0,9,345	0/0:15,0:15:18.06:0,18,287	./.	./.	1/1:3,0:3:6.02:119,6,0	0/0:1,0:1:3.01:0,3,150	./.	0/0:1,0:1:3.01:0,3,57	0/0:4,0:4:12.04:0,12,567	./.	0/1:3,10:13:37.35:168,0,37	0/1:6,4:10:78:78,0,79	1/1:9,0:7:12.04:207,12,0	./.	./.	./.	0/0:4,0:4:9.03:0,9,394	./.	0/0:6,0:6:18.06:0,18,763	1/1:2,1:3:6.02:167,6,0	./.	1/1:9,0:9:18.06:331,18,0
chr10	53163309	.	CTCTCTCTG	C	1177.62	PASS	AB=1.000;AC=14;AF=0.318;AN=44;BaseQRankSum=3.508;DP=166;FS=0.000;HRun=0;HaplotypeScore=57.1399;InbreedingCoeff=0.4569;MQ=83.16;MQ0=9;MQRankSum=-4.031;QD=18.99;ReadPosRankSum=2.083;VQSLOD=1.3816;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:5:12.04:0,12,316	./.	0/0:13,0:7:6.65:0,7,32	0/0:25,0:13:3.08:0,3,78	0/0:6,0:6:15.05:0,15,456	0/0:5,0:5:15.05:0,15,403	0/0:3,0:3:9.03:0,9,323	0/0:24,0:22:51.13:0,51,987	0/0:1,0:1:3.01:0,3,38	1/1:2,0:2:3.01:37,3,0	1/1:0,2:2:6.02:163,6,0	0/0:2,0:2:3.01:0,3,130	0/0:1,0:1:3.01:0,3,38	0/0:1,0:1:3.01:0,3,97	0/0:4,0:4:12.04:0,12,484	./.	0/1:15,0:15:69.13:98,0,69	0/1:14,0:14:31.76:32,0,161	1/1:9,4:8:12.04:327,12,0	./.	./.	./.	0/0:4,0:4:9.03:0,9,331	./.	0/0:6,0:6:18.06:0,18,651	1/1:3,0:3:6.02:130,6,0	1/1:1,2:3:3:25,3,0	1/1:4,6:10:21.06:512,21,0
chr10	53163343	.	TTA	T	729.66	PASS	AB=0.938;AC=4;AF=0.071;AN=56;BaseQRankSum=0.450;DP=177;FS=0.000;HRun=0;HaplotypeScore=40.8099;InbreedingCoeff=0.1289;MQ=101.42;MQ0=3;MQRankSum=-3.377;QD=20.27;ReadPosRankSum=0.342;VQSLOD=3.1802;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:6,1:7:61.27:61,0,124	0/0:4,0:4:12.04:0,12,188	0/0:15,0:12:6.05:0,6,60	0/0:27,0:17:13.21:0,13,130	0/0:7,0:7:21.07:0,21,339	0/0:5,0:5:15.05:0,15,238	0/0:1,0:1:2.99:0,3,24	1/1:3,21:24:63.12:757,63,0	0/0:1,0:1:3.01:0,3,50	0/0:3,0:3:6.02:0,6,88	0/0:3,0:3:3.01:0,3,44	0/0:3,0:3:6.01:0,6,62	0/0:6,0:6:18.04:0,18,249	0/0:1,0:1:3.01:0,3,44	0/0:3,0:3:9.03:0,9,151	0/0:1,0:1:3.01:0,3,50	0/0:17,0:17:22.63:0,23,354	0/0:11,0:11:20.10:0,20,301	0/0:5,0:5:15.05:0,15,234	0/0:4,0:4:12.04:0,12,194	0/0:2,0:2:3.01:0,3,50	0/0:1,0:1:3.01:0,3,37	0/0:3,0:3:6.02:0,6,100	0/0:3,0:3:9.03:0,9,132	0/1:5,0:5:23.07:23,0,186	0/0:4,0:4:12.04:0,12,178	0/0:5,0:5:5.08:0,5,139	0/0:6,0:6:15.05:0,15,237
chr10	53163458	.	C	CTG	1071.83	PASS	AB=0.965;AC=17;AF=0.327;AN=52;BaseQRankSum=-1.606;DP=403;FS=13.905;HRun=0;HaplotypeScore=91.6941;InbreedingCoeff=-0.0873;MQ=41.49;MQ0=35;MQRankSum=-1.879;QD=5.23;ReadPosRankSum=-2.397;VQSLOD=1.1940;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:24:41.01:0,41,458	0/0:5,0:5:12.02:0,12,144	./.	./.	0/0:9,3:11:2.74:0,3,9	0/1:12,0:12:20.04:80,0,20	0/1:12,0:11:32.50:126,0,32	0/1:40,0:38:99:137,0,186	0/1:11,0:11:48.84:58,0,49	0/1:13,0:12:20.81:106,0,21	1/1:9,0:9:2.99:24,3,0	0/0:13,0:12:26.68:0,27,358	0/0:10,0:9:26.94:0,27,341	0/1:15,0:14:6.02:61,0,6	0/0:12,0:11:26.80:0,27,356	0/0:17,0:16:32.85:0,33,366	0/0:10,0:9:8.88:0,9,74	0/1:15,0:14:57.92:64,0,58	0/1:17,0:14:18.99:19,0,127	1/1:7,0:6:3:25,3,0	0/1:19,0:14:11.49:13,0,11	0/0:10,0:9:16.63:0,17,245	0/0:16,0:14:33.09:0,33,434	0/0:34,0:32:75.01:0,75,989	0/0:8,0:6:2.94:0,3,24	0/1:9,16:22:53.75:437,0,54	0/1:9,0:9:45.81:50,0,46	1/1:1,0:1:2.99:23,3,0
chr10	53163465	.	TCA	T	186.04	PASS	AB=0.987;AC=21;AF=0.457;AN=46;BaseQRankSum=2.656;DP=391;FS=22.394;HRun=0;HaplotypeScore=90.2037;InbreedingCoeff=0.3448;MQ=40.36;MQ0=36;MQRankSum=0.592;QD=1.22;ReadPosRankSum=-1.234;VQSLOD=0.1411;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:26:9.64:10,0,179	./.	./.	./.	1/1:10,0:10:0.62:14,1,0	1/1:11,0:10:2.76:18,3,0	1/1:9,1:9:8.77:53,9,0	./.	1/1:10,0:10:8.75:50,9,0	0/0:16,0:15:9.43:0,9,58	0/1:8,0:8:0:0,0,0	0/0:14,0:13:4.72:0,5,210	0/1:13,1:13:11.60:12,0,179	1/1:7,6:11:2.83:15,3,0	0/1:11,0:10:13.17:13,0,96	0/0:15,1:15:0.08:0,0,120	0/1:12,0:11:0.38:0,0,1	1/1:16,0:15:16.12:109,16,0	0/0:15,0:14:8.66:0,9,62	./.	0/0:26,0:19:11.82:0,12,86	0/0:10,0:9:5.84:0,6,86	0/0:15,0:13:6.02:0,6,80	0/0:37,0:35:6.91:0,7,287	1/1:6,0:4:2.99:24,3,0	0/0:18,0:15:11.67:0,12,81	0/0:9,0:8:5.94:0,6,65	1/1:1,0:1:2.60:10,3,0
chr10	53163508	.	CAAACAA	C	535.29	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.844;DP=458;FS=0.000;HRun=0;HaplotypeScore=101.8027;InbreedingCoeff=0.4561;MQ=55.16;MQ0=25;MQRankSum=0.028;QD=35.69;ReadPosRankSum=-0.030;VQSLOD=3.0650;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:36:31.48:0,31,1387	0/0:2,0:2:6.02:0,6,117	0/0:28,0:16:41.87:0,42,690	0/0:23,0:14:39.13:0,39,783	0/0:10,0:9:3.61:0,4,203	0/0:12,0:9:9.39:0,9,210	0/0:15,0:15:7.39:0,7,450	1/1:1,14:15:42.06:629,42,0	0/0:12,0:12:8.28:0,8,258	0/0:12,0:11:3.12:0,3,391	0/0:8,0:8:9.50:0,10,146	0/0:20,0:20:52.41:0,52,1092	0/0:20,0:20:48.74:0,49,1072	0/0:21,0:20:25.62:0,26,610	0/0:16,0:16:45.15:0,45,946	0/0:25,0:25:50.42:0,50,1138	0/0:17,0:15:39.95:0,40,634	0/0:16,0:14:36.12:0,36,724	0/0:10,0:10:1.42:0,1,424	0/0:7,0:6:9.03:0,9,155	0/0:28,0:25:51.13:0,51,920	0/0:7,0:9:8.61:0,9,290	0/0:12,0:10:20.95:0,21,312	0/0:34,0:33:87.23:0,87,1798	0/0:10,0:9:24.06:0,24,402	0/0:14,0:13:17.46:0,17,441	0/0:16,0:14:23.58:0,24,606	0/0:5,0:5:15.05:0,15,290
chr10	53165351	.	T	TGATCTAAC	47756.36	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-8.258;DP=791;FS=0.000;HRun=0;HaplotypeScore=188.4107;InbreedingCoeff=0.9751;MQ=84.04;MQ0=0;MQRankSum=-21.766;QD=103.82;ReadPosRankSum=-1.991;VQSLOD=4.6161;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,150,4084	0/0:15,0:15:45.15:0,45,1292	0/0:46,0:46:99:0,114,3063	0/0:20,0:20:51.13:0,51,1236	1/1:10,27:39:87.30:3422,87,0	1/1:3,9:15:33.11:1334,33,0	1/1:9,16:26:66.23:2928,66,0	1/1:18,20:40:99:4782,114,0	1/1:11,15:28:78.27:3050,78,0	1/1:10,13:27:75.26:2967,75,0	1/1:5,20:28:69.24:2840,69,0	0/0:29,0:29:87.27:0,87,2354	0/0:31,0:31:90.29:0,90,2514	1/1:11,14:27:72.25:2836,72,0	0/0:31,0:31:93.31:0,93,2533	0/0:27,0:27:75.23:0,75,2030	1/1:4,17:26:60.20:2396,60,0	1/1:7,12:20:51.01:2130,51,0	1/1:12,8:21:54.18:2022,54,0	1/1:9,23:33:90.31:3511,90,0	1/1:7,12:21:48.16:1835,48,0	0/0:29,0:29:87.28:0,87,2402	0/0:24,0:24:66.23:0,66,1856	0/0:28,0:28:81.24:0,81,2199	1/1:5,24:33:87.30:3647,87,0	1/1:15,17:32:93.26:3537,93,0	1/1:10,27:42:99:4466,108,0	1/1:1,0:1:3.01:53,3,0
chr10	53169690	.	AAAAAAAG	A	4254.07	PASS	AB=0.575;AC=11;AF=0.196;AN=56;BaseQRankSum=8.467;DP=581;FS=2.142;HRun=0;HaplotypeScore=132.6863;InbreedingCoeff=0.8711;MQ=60.16;MQ0=6;MQRankSum=-6.841;QD=33.50;ReadPosRankSum=8.861;VQSLOD=3.5839;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:84.26:0,84,2424	0/0:11,0:11:33.10:0,33,1027	0/0:37,0:16:25.36:0,25,377	0/0:24,0:12:23.59:0,24,462	1/1:6,20:26:44.19:567,44,0	1/1:2,17:19:45:960,45,0	1/1:2,16:18:10.42:579,10,0	0/0:27,0:27:71.96:0,72,1712	0/1:6,17:23:53.51:868,0,54	0/0:21,0:21:60.14:0,60,1638	0/0:26,0:26:69.22:0,69,1535	0/0:23,0:23:63.22:0,63,1912	0/0:21,0:21:62.24:0,62,1838	1/1:2,16:18:35.94:798,36,0	0/0:23,0:23:66.21:0,66,1952	0/0:25,0:25:57.11:0,57,1471	0/0:21,0:20:25.42:0,25,644	0/0:24,0:23:46.69:0,47,1327	0/0:17,0:16:33.11:0,33,887	0/0:27,0:26:74.60:0,75,1913	0/0:5,0:5:14.95:0,15,301	0/0:9,0:9:27.09:0,27,701	0/0:17,0:17:51.16:0,51,1237	0/0:16,0:16:42.13:0,42,1128	1/1:7,16:23:22.67:482,23,0	0/0:21,0:21:57.18:0,57,1444	0/0:22,0:22:63.20:0,63,1796	0/0:9,0:9:24.97:0,25,696
chr10	53169697	.	GAT	G	193.43	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=12.419;DP=467;FS=25.248;HRun=0;HaplotypeScore=88.4530;InbreedingCoeff=0.8653;MQ=67.32;MQ0=3;MQRankSum=-7.924;QD=1.77;ReadPosRankSum=6.376;VQSLOD=-0.1407;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:69.08:0,69,1065	0/0:9,0:9:27.09:0,27,467	0/0:22,1:12:18.06:0,18,254	0/0:15,1:13:22.13:0,22,289	1/1:21,0:21:25.36:117,25,0	1/1:18,0:17:22.75:63,23,0	1/1:16,0:16:13.95:35,14,0	0/0:20,0:20:50.53:0,51,838	0/1:20,0:20:33.28:36,0,33	0/0:14,0:14:36.12:0,36,629	0/0:20,0:20:37.04:0,37,468	0/0:20,0:20:50.91:0,51,867	0/0:19,1:20:54.14:0,54,894	1/1:16,0:16:22.16:66,22,0	0/0:21,0:21:60.16:0,60,971	0/0:17,0:17:39.06:0,39,595	0/0:15,1:15:23.61:0,24,283	0/0:21,0:21:54.17:0,54,885	0/0:14,0:13:35.26:0,35,525	0/0:21,0:21:44.57:0,45,629	0/0:5,0:5:14.64:0,15,199	0/0:9,0:9:21.05:0,21,296	0/0:11,0:13:29.81:0,30,391	0/0:14,0:14:30.10:0,30,496	1/1:17,1:18:15.92:53,16,0	0/0:17,0:17:39.12:0,39,657	0/0:18,0:18:46.40:0,46,831	0/0:5,0:5:13.29:0,13,234
chr10	53170320	.	A	AT	2869.86	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=-11.422;DP=521;FS=1.993;HRun=6;HaplotypeScore=53.9576;InbreedingCoeff=0.9017;MQ=69.61;MQ0=0;MQRankSum=0.028;QD=24.96;ReadPosRankSum=1.589;VQSLOD=3.5476;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:72.11:0,72,712	0/0:7,0:7:18.04:0,18,184	0/0:13,0:11:15.92:0,16,199	0/1:9,0:9:6.04:6,0,87	1/1:5,29:34:81.15:974,81,0	1/1:3,13:16:36.12:453,36,0	1/1:3,9:12:24.08:302,24,0	0/0:21,0:21:54.08:0,54,535	1/1:1,6:7:9.03:113,9,0	0/0:26,0:26:75.16:0,75,760	0/0:26,0:26:72.16:0,72,734	0/0:20,0:20:48.07:0,48,476	0/0:14,0:14:42.09:0,42,427	1/1:0,9:9:24.08:302,24,0	0/0:14,0:14:42.09:0,42,423	0/0:22,0:22:60.13:0,60,607	0/0:17,0:17:48.09:0,48,477	0/0:19,0:19:48.10:0,48,488	0/0:24,0:24:60.13:0,60,612	0/0:21,0:21:48.10:0,48,484	0/0:13,0:13:24.05:0,24,245	0/0:9,0:9:27.05:0,27,269	0/0:25,0:25:75.15:0,75,757	0/0:22,0:22:57.13:0,57,581	1/1:2,26:28:72.10:906,72,0	0/0:31,0:31:87.20:0,87,887	0/0:26,0:26:72.16:0,72,734	0/0:12,0:12:36.08:0,36,367
chr10	53170856	.	C	CACTT	27866.46	PASS	AB=0.962;AC=35;AF=0.625;AN=56;BaseQRankSum=-16.023;DP=740;FS=1.955;HRun=0;HaplotypeScore=105.6896;InbreedingCoeff=0.9361;MQ=83.53;MQ0=0;MQRankSum=-11.500;QD=61.93;ReadPosRankSum=1.179;VQSLOD=6.8035;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,151,2818	0/0:11,0:11:33.11:0,33,613	0/0:36,0:35:96.30:0,96,1759	0/0:28,0:28:65.60:0,66,1223	1/1:2,30:33:81.28:2166,81,0	1/1:4,19:23:48.13:1253,48,0	1/1:1,14:15:33.08:842,33,0	1/1:4,27:32:93.32:2307,93,0	1/1:1,16:18:48.16:1273,48,0	1/1:3,31:35:99:2636,99,0	1/1:4,29:33:96.11:2221,96,0	0/0:24,0:24:68.48:0,68,1321	0/0:26,0:26:78.25:0,78,1441	1/1:1,18:19:48.16:1312,48,0	0/0:24,0:24:72.25:0,72,1371	0/1:24,1:25:6.94:7,0,1296	1/1:3,28:31:72.20:1901,72,0	1/1:0,13:15:33.11:904,33,0	1/1:4,22:26:75.26:1838,75,0	1/1:3,27:32:78.26:1955,78,0	1/1:1,21:22:42.14:1143,42,0	0/0:29,0:29:81.28:0,81,1518	0/0:21,0:21:60.21:0,60,1131	0/0:38,0:38:99:0,114,2132	1/1:4,14:20:45.11:1169,45,0	1/1:3,30:33:96.33:2485,96,0	1/1:0,27:28:69.24:1881,69,0	1/1:0,10:10:21.07:575,21,0
chr10	53172036	.	C	CTA	12700.17	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-19.704;DP=749;FS=7.174;HRun=0;HaplotypeScore=83.4598;InbreedingCoeff=0.9998;MQ=90.17;MQ0=0;MQRankSum=-6.202;QD=55.70;ReadPosRankSum=0.265;VQSLOD=4.8294;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,165,2602	0/0:9,0:9:27.09:0,27,434	0/0:29,0:29:87:0,87,1252	0/0:30,0:31:87.64:0,88,1249	1/1:2,35:37:99:2056,105,0	1/1:1,21:22:66.23:1318,66,0	1/1:0,24:24:66.23:1341,66,0	1/1:0,34:37:99:2113,111,0	1/1:0,20:20:57.20:1158,57,0	0/0:22,0:22:63.21:0,63,1026	0/0:34,0:34:99:0,102,1618	0/0:25,0:25:75.24:0,75,1194	0/0:21,0:21:63.20:0,63,1000	1/1:0,24:24:63.19:1242,63,0	0/0:31,0:31:90.31:0,90,1468	0/0:30,0:30:87.29:0,87,1398	1/1:0,29:29:84.29:1706,84,0	1/1:1,15:17:45.15:914,45,0	0/0:23,0:23:69.24:0,69,1124	0/0:23,0:23:66.20:0,66,1024	0/0:34,0:34:99:0,99,1590	0/0:26,0:26:75.24:0,75,1198	0/0:25,0:25:72.20:0,72,1083	0/0:28,0:28:84.23:0,84,1316	1/1:3,15:18:42.14:853,42,0	0/0:25,0:25:72.22:0,72,1129	0/0:37,0:37:99:0,105,1713	0/0:13,0:13:39.08:0,39,583
chr10	53173128	.	G	GGAGA	5438.63	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=1.189;DP=518;FS=15.721;HRun=0;HaplotypeScore=120.2203;InbreedingCoeff=0.9806;MQ=70.81;MQ0=8;MQRankSum=-8.728;QD=36.26;ReadPosRankSum=-1.685;VQSLOD=3.7907;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:27:66.08:0,66,1165	0/0:6,0:6:18.06:0,18,342	0/0:35,0:23:65.43:0,65,1095	0/0:44,0:32:75.25:0,75,1352	1/1:1,20:21:18.06:430,18,0	1/1:3,19:22:33.11:780,33,0	1/1:4,16:20:36.12:907,36,0	1/1:5,15:20:48.16:1252,48,0	1/1:1,15:17:24.08:595,24,0	0/0:24,0:24:66.23:0,66,1218	0/0:12,0:12:27.09:0,27,513	0/0:14,0:14:42.09:0,42,728	0/0:10,0:10:30.09:0,30,536	1/1:2,12:14:18.06:412,18,0	0/0:19,0:19:54.17:0,54,1006	0/0:20,0:20:57.19:0,57,1053	1/1:2,11:11:15.05:403,15,0	1/1:8,3:11:21.03:444,21,0	0/0:17,0:16:48.14:0,48,826	0/0:12,0:12:27.07:0,27,511	0/0:25,0:25:66.07:0,66,1180	0/0:13,0:13:39.13:0,39,722	0/0:11,0:11:33.11:0,33,610	0/0:37,0:37:84.24:0,84,1541	1/1:1,10:12:9.03:215,9,0	0/0:23,0:23:69.22:0,69,1258	0/0:13,0:12:36.10:0,36,643	0/0:5,0:5:15.05:0,15,285
chr10	53173158	.	GACAGACAC	G	2378.30	PASS	AB=0.981;AC=18;AF=0.321;AN=56;BaseQRankSum=-1.900;DP=501;FS=19.718;HRun=0;HaplotypeScore=140.0327;InbreedingCoeff=0.5877;MQ=44.17;MQ0=32;MQRankSum=0.077;QD=12.52;ReadPosRankSum=0.013;VQSLOD=1.2789;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:25:38.41:0,38,723	0/0:7,0:7:16.39:0,16,437	0/0:9,0:3:2.98:0,3,22	0/0:21,0:12:8.90:0,9,130	0/0:18,0:17:9:0,9,146	0/0:30,0:29:26.73:0,27,276	0/0:22,0:19:15.21:0,15,86	1/1:16,0:15:8.20:44,8,0	0/0:13,0:13:18.61:0,19,117	1/1:21,2:21:34.33:562,34,0	1/1:7,0:7:14.95:118,15,0	0/0:13,0:11:23.48:0,23,271	0/0:21,0:20:44.59:0,45,932	0/0:14,0:12:10.18:0,10,62	0/0:19,0:19:44.85:0,45,624	0/0:17,0:15:27.78:0,28,308	0/1:18,0:13:35.06:45,0,35	0/1:11,0:8:20.33:20,0,126	1/1:21,3:22:8.96:399,9,0	0/1:11,0:12:26.12:162,0,26	1/1:29,0:23:18.61:259,19,0	0/0:12,0:12:23.97:0,24,199	0/0:12,0:12:23.69:0,24,323	0/0:39,0:36:56.60:0,57,1239	0/0:17,0:16:9.01:0,9,129	1/1:3,19:20:56.70:523,57,0	1/1:15,1:15:33.78:367,34,0	0/1:11,0:8:25.02:74,0,25
chr10	53173160	.	CAG	C	1526.29	PASS	AB=0.989;AC=20;AF=0.357;AN=56;BaseQRankSum=-0.389;DP=497;FS=13.910;HRun=0;HaplotypeScore=105.9008;InbreedingCoeff=0.0820;MQ=43.47;MQ0=35;MQRankSum=0.754;QD=5.16;ReadPosRankSum=0.874;VQSLOD=2.1494;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:23:38.96:0,39,426	0/0:7,0:7:16.79:0,17,167	0/0:6,0:1:2.98:0,3,22	0/0:17,0:10:8.90:0,9,130	0/0:19,0:18:8.93:0,9,66	0/0:28,1:28:21.51:0,22,147	0/0:22,0:19:16.40:0,16,95	1/1:17,0:16:8.40:44,8,0	0/0:13,0:13:17.75:0,18,119	0/1:24,0:22:99:288,0,114	1/1:7,0:7:14.95:118,15,0	0/0:13,0:11:17.97:0,18,172	0/1:21,0:20:31.14:31,0,272	0/1:14,0:12:10.81:11,0,43	0/0:20,0:20:26.07:0,26,360	0/1:17,0:15:7.27:7,0,186	0/0:18,0:13:17.83:0,18,146	0/1:12,0:9:5.58:6,0,80	0/1:22,0:20:33.80:154,0,34	1/1:13,0:13:18.06:128,18,0	0/1:30,0:22:56.19:191,0,56	0/1:13,0:13:16.53:17,0,149	0/0:9,3:12:23.74:0,24,213	0/1:38,0:35:64:64,0,480	0/1:15,1:15:31.86:32,0,32	1/1:22,0:20:24.35:346,24,0	0/1:17,0:15:1.47:190,0,1	0/1:12,0:9:15.39:78,0,15
chr10	53173258	.	A	AGAGC	1529.45	PASS	AB=0.807;AC=16;AF=0.286;AN=56;BaseQRankSum=-1.386;DP=617;FS=25.945;HRun=0;HaplotypeScore=111.9325;InbreedingCoeff=0.8389;MQ=69.98;MQ0=25;MQRankSum=-1.374;QD=7.92;ReadPosRankSum=-1.709;VQSLOD=0.8244;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:38.79:0,39,297	0/0:8,0:8:20.95:0,21,170	0/0:42,0:21:10.39:0,10,247	0/0:64,0:23:36.85:0,37,374	1/1:21,0:21:33.42:231,33,0	1/1:19,0:17:6.13:160,6,0	0/1:13,22:34:0.08:1,0,0	1/1:28,0:27:51.12:360,51,0	1/1:18,0:17:29.33:240,29,0	0/0:25,0:21:60.08:0,60,614	0/0:15,0:14:20.92:0,21,168	0/0:21,0:20:32.98:0,33,292	0/0:17,0:15:12.82:0,13,215	1/1:18,0:18:20.88:179,21,0	0/0:16,0:16:37.78:0,38,306	0/0:25,0:24:37.98:0,38,553	0/1:16,0:15:67.49:106,0,67	1/1:10,0:10:9.18:108,9,0	0/0:23,0:23:56.67:0,57,486	0/0:22,0:22:47.92:0,48,395	0/0:28,0:25:38.77:0,39,344	0/0:13,0:13:29.90:0,30,243	0/0:10,0:10:20.95:0,21,170	0/0:21,0:20:38.27:0,38,279	1/1:28,0:27:46.70:338,47,0	0/0:24,0:24:57.06:0,57,571	0/0:14,0:13:23.96:0,24,209	0/0:18,0:16:21.99:0,22,228
chr10	53174133	.	T	TTGTG	3111.18	PASS	AB=0.884;AC=31;AF=0.596;AN=52;BaseQRankSum=5.027;DP=693;FS=13.492;HRun=0;HaplotypeScore=144.4188;InbreedingCoeff=0.6312;MQ=63.28;MQ0=14;MQRankSum=-4.645;QD=7.57;ReadPosRankSum=-3.613;VQSLOD=0.8729;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:43:6.89:0,7,58	0/1:10,0:10:7.94:8,0,122	./.	./.	0/1:15,13:32:23.43:194,0,23	1/1:16,4:26:3.01:71,3,0	1/1:19,8:32:17.20:247,17,0	1/1:20,0:19:17.90:159,18,0	1/1:9,8:19:12.02:236,12,0	1/1:35,0:35:51.59:713,52,0	1/1:26,0:26:17.82:220,18,0	0/0:18,0:18:15.04:0,15,231	0/0:19,0:21:24.07:0,24,352	1/1:10,7:24:5.70:140,6,0	0/0:31,0:31:24.03:0,24,346	0/0:22,0:24:27.06:0,27,360	0/0:21,0:29:13.74:0,14,137	0/0:14,0:12:6.01:0,6,60	1/1:23,0:21:9.03:127,9,0	1/1:32,0:28:30.04:440,30,0	1/1:30,0:30:8.95:103,9,0	0/1:20,0:20:35.21:35,0,94	0/0:18,0:18:14.05:0,14,170	0/0:31,0:32:12.50:0,13,512	1/1:4,1:23:11.51:166,12,0	1/1:24,0:24:8.99:100,9,0	1/1:21,0:21:17.76:263,18,0	1/1:13,0:11:6.02:80,6,0
chr10	53174149	.	G	GTGTGTGTGTA	4221.42	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=0.411;DP=759;FS=16.662;HRun=0;HaplotypeScore=187.5822;InbreedingCoeff=0.5967;MQ=53.08;MQ0=35;MQRankSum=-0.487;QD=14.12;ReadPosRankSum=1.800;VQSLOD=2.6865;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:48:65.84:0,66,623	0/0:10,0:10:21.01:0,21,337	0/0:31,0:7:5.38:0,5,39	0/0:45,0:12:13.75:0,14,126	0/1:30,0:30:2.11:2,0,165	0/0:25,0:25:20.72:0,21,210	0/0:29,0:28:17.25:0,17,290	0/0:23,0:22:39.41:0,39,306	0/0:17,0:17:9.10:0,9,86	1/1:40,0:39:27.17:1298,27,0	1/1:26,0:26:26.15:474,26,0	0/0:20,0:20:50.55:0,51,744	0/0:21,0:21:56.95:0,57,989	0/1:26,0:26:4.69:5,0,120	0/0:27,0:27:71.54:0,72,1045	0/0:21,0:21:47.98:0,48,930	0/0:34,0:34:68.72:0,69,791	0/0:21,0:19:44.95:0,45,416	0/1:19,0:14:2.86:236,0,3	1/1:32,0:28:38.52:625,39,0	0/1:32,0:32:4.26:390,0,4	0/0:25,0:25:44.08:0,44,581	0/0:23,0:23:47.97:0,48,664	0/0:39,0:39:73.23:0,73,1397	0/1:26,0:25:41.82:42,0,82	1/1:4,19:30:16.91:478,17,0	1/1:1,18:27:2.55:545,3,0	1/1:11,0:9:6.02:126,6,0
chr10	53174151	.	G	GTGTGTGTA	2484.13	PASS	AB=0.965;AC=14;AF=0.250;AN=56;BaseQRankSum=3.949;DP=755;FS=0.000;HRun=0;HaplotypeScore=167.7439;InbreedingCoeff=-0.0886;MQ=52.77;MQ0=36;MQRankSum=-3.409;QD=7.26;ReadPosRankSum=4.618;VQSLOD=2.4123;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:48:71.81:0,72,640	0/0:10,0:10:21.01:0,21,323	0/0:29,0:5:2.15:0,2,45	0/0:49,0:13:17.11:0,17,151	0/1:29,0:29:12.85:13,0,166	0/0:24,0:24:15.10:0,15,204	0/1:29,0:28:11.14:11,0,263	0/0:23,0:22:40.50:0,40,311	0/1:18,0:18:18.70:19,0,98	0/1:40,0:39:76.91:623,0,77	0/1:25,0:25:18.05:290,0,18	0/0:20,0:20:28.41:0,28,648	0/0:21,0:21:57.01:0,57,897	0/1:25,0:25:20.46:20,0,120	0/0:27,0:27:71.97:0,72,985	0/0:22,0:22:53.96:0,54,871	0/0:33,0:33:71.74:0,72,750	0/0:20,0:18:44.76:0,45,413	0/1:19,0:14:59.60:163,0,60	0/1:32,0:28:44.16:374,0,44	0/1:30,0:30:45.32:295,0,45	0/0:25,0:25:43.09:0,43,557	0/0:22,0:22:47.97:0,48,613	0/0:39,0:39:77.68:0,78,1305	0/1:27,0:26:49.07:49,0,78	0/1:30,0:30:99:226,0,123	1/1:27,0:27:17.04:436,17,0	0/1:3,7:9:0.58:124,0,1
chr10	53174527	.	AT	A	4332.60	PASS	AB=0.913;AC=17;AF=0.304;AN=56;BaseQRankSum=6.150;DP=678;FS=4.943;HRun=10;HaplotypeScore=115.0772;InbreedingCoeff=0.9142;MQ=66.63;MQ0=0;MQRankSum=1.363;QD=19.78;ReadPosRankSum=1.135;VQSLOD=4.5065;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,3:36:34.88:0,35,795	0/0:7,0:7:21.05:0,21,224	0/0:10,0:11:17.77:0,18,152	0/0:15,0:16:30.01:0,30,300	0/0:26,0:27:59.86:0,60,596	0/1:19,2:21:10:10,0,343	0/0:20,0:20:39.09:0,39,421	0/0:30,2:32:35.09:0,35,832	0/0:20,0:20:48.11:0,48,526	1/1:4,33:37:95.94:830,96,0	1/1:1,17:18:47.99:417,48,0	0/0:30,0:30:81.22:0,81,896	0/0:26,1:27:40.12:0,40,668	0/0:31,1:32:49.11:0,49,748	0/0:19,0:19:54.15:0,54,597	0/0:34,0:34:87.21:0,87,946	0/0:25,1:26:40.10:0,40,659	0/0:14,0:14:39.11:0,39,431	1/1:5,27:32:80.96:699,81,0	1/1:2,24:27:71.02:604,71,0	1/1:4,14:18:41.98:365,42,0	0/0:36,0:37:99:0,99,1058	0/0:19,1:20:25.16:0,25,505	0/0:27,1:28:55.14:0,55,821	0/0:23,0:22:54.02:0,54,557	1/1:1,21:22:62.96:542,63,0	1/1:5,34:39:89.96:781,90,0	1/1:1,3:5:11.03:84,11,0
chr10	53174561	.	TGACTCTAG	T	10234.71	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=11.362;DP=683;FS=0.765;HRun=0;HaplotypeScore=194.1929;InbreedingCoeff=0.9921;MQ=82.23;MQ0=0;MQRankSum=-16.150;QD=72.08;ReadPosRankSum=1.615;VQSLOD=4.7601;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:93.32:0,93,3970	0/0:7,0:7:18.06:0,18,814	0/0:23,0:23:69.18:0,69,2770	0/0:25,0:25:61.51:0,62,2662	1/1:1,23:25:63.22:1757,63,0	1/1:0,24:24:57.20:1657,57,0	1/1:0,19:19:45.15:1314,45,0	0/0:36,0:36:99:0,108,4521	1/1:0,21:21:51.17:1482,51,0	0/0:32,0:32:93.32:0,93,4116	0/0:22,0:22:66.23:0,66,2989	0/0:30,0:30:90.24:0,90,3842	0/0:27,0:27:81.28:0,81,3630	1/1:0,28:28:75.26:2183,75,0	0/0:28,0:28:84.27:0,84,3535	0/0:28,0:28:81.28:0,81,3571	0/0:32,0:32:96.29:0,96,3967	0/0:12,0:12:33.09:0,33,1380	0/0:15,0:15:45.14:0,45,1834	0/0:33,0:33:99:0,99,4443	0/0:18,0:18:54.14:0,54,2294	0/0:31,0:31:87.17:0,87,3448	0/0:17,0:17:51.16:0,51,2138	0/0:26,0:26:75.26:0,75,3256	1/1:0,25:24:63.22:1841,63,0	0/0:25,0:25:75.26:0,75,3384	0/0:39,0:39:99:0,114,5016	0/0:4,0:4:12.04:0,12,544
chr10	53179470	.	GTATATATA	G	12745.99	PASS	AB=0.580;AC=29;AF=0.537;AN=54;BaseQRankSum=12.373;DP=570;FS=1.205;HRun=0;HaplotypeScore=174.4044;InbreedingCoeff=0.7621;MQ=62.89;MQ0=2;MQRankSum=-12.627;QD=32.11;ReadPosRankSum=3.181;VQSLOD=4.4525;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:28:78.27:0,78,3105	0/0:8,0:9:27.09:0,27,1039	0/0:7,0:7:11.97:0,12,178	0/0:15,0:14:22.37:0,22,345	0/1:12,0:31:87.49:95,0,87	1/1:4,0:22:27.34:182,27,0	0/1:4,0:13:29.47:45,0,29	1/1:13,30:43:90.10:1834,90,0	1/1:2,0:24:45.99:242,46,0	1/1:2,15:17:45.14:1120,45,0	1/1:0,26:26:60.20:1524,60,0	0/0:16,0:17:45.14:0,45,1711	0/0:20,0:20:51.16:0,51,2024	1/1:3,0:26:48.87:258,49,0	0/0:11,0:12:27.09:0,27,1029	0/0:10,0:10:30.10:0,30,1290	1/1:4,17:21:27.09:727,27,0	1/1:3,8:11:12.04:323,12,0	1/1:6,10:16:30.04:659,30,0	1/1:3,37:40:84.22:2022,84,0	1/1:5,12:17:11.86:269,12,0	0/0:14,0:15:39.12:0,39,1429	0/0:21,0:23:60.21:0,60,2391	0/0:11,0:12:30.10:0,30,1091	0/1:3,0:27:70.65:204,0,71	1/1:9,25:34:72.22:1789,72,0	1/1:3,26:29:54.19:1453,54,0	./.
chr10	53181416	.	AGCAT	A	9633.25	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=16.347;DP=724;FS=7.341;HRun=0;HaplotypeScore=129.5087;InbreedingCoeff=0.9987;MQ=82.60;MQ0=0;MQRankSum=-7.995;QD=48.41;ReadPosRankSum=0.924;VQSLOD=5.3355;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:61,0:61:99:0,181,4647	0/0:8,0:8:24.08:0,24,655	0/0:21,0:21:51.13:0,51,961	0/0:21,0:21:19.44:0,19,802	1/1:0,18:18:54.14:1007,54,0	1/1:0,22:22:57.15:1055,57,0	1/1:0,14:14:39.13:750,39,0	1/1:3,25:28:78.01:1385,78,0	1/1:0,19:19:42.14:811,42,0	0/0:29,0:29:87.28:0,87,2171	0/0:23,0:23:69.24:0,69,1881	0/0:30,0:30:87.28:0,87,2317	0/0:39,0:39:99:0,117,3014	1/1:0,19:19:42.14:812,42,0	0/0:23,0:23:63.19:0,63,1607	0/0:43,0:43:99:0,129,3369	1/1:0,33:33:75.26:1451,75,0	1/1:0,16:16:48.12:891,48,0	0/0:16,0:16:48.14:0,48,1201	0/0:29,0:29:81.26:0,81,2137	0/0:36,0:36:99:0,99,2604	0/0:18,0:18:54.16:0,54,1410	0/0:16,0:16:48.16:0,48,1314	0/0:37,0:37:99:0,111,2954	1/1:0,30:30:78.22:1471,78,0	0/0:33,0:33:99:0,99,2510	0/0:31,0:31:93.30:0,93,2476	0/0:11,0:11:33.11:0,33,800
chr10	53184153	.	G	GACAGACACACACACAC	4988.80	PASS	AB=1.000;AC=25;AF=0.446;AN=56;BaseQRankSum=5.244;DP=525;FS=2.356;HRun=0;HaplotypeScore=235.8471;InbreedingCoeff=0.4573;MQ=50.17;MQ0=10;MQRankSum=-5.575;QD=16.52;ReadPosRankSum=-5.210;VQSLOD=2.8119;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:44:89.92:0,90,2104	0/0:7,0:8:22.28:0,22,474	0/0:11,0:8:14.64:0,15,119	0/0:14,0:11:17.09:0,17,201	1/1:8,0:8:3.01:73,3,0	0/1:16,0:16:25.04:146,0,25	0/1:28,0:26:75.61:322,0,76	1/1:30,0:26:6.10:854,6,0	0/1:9,0:9:7.98:74,0,8	1/1:14,0:14:36.05:476,36,0	0/1:9,0:9:0:0,0,0	0/0:27,0:27:78.02:0,78,1764	0/0:11,0:12:29.81:0,30,618	0/1:16,0:16:61.11:61,0,62	0/0:20,0:21:56.64:0,57,1356	0/0:12,0:12:35.31:0,35,781	0/1:27,0:27:99:238,0,664	0/1:28,0:27:43.40:43,0,632	1/1:24,0:21:41.02:583,41,0	1/1:13,0:13:17.57:267,18,0	1/1:45,0:44:48.51:677,49,0	0/0:13,0:13:36.01:0,36,816	0/0:12,0:12:29.82:0,30,518	0/0:32,0:32:87.11:0,87,1883	0/0:14,0:14:1.57:0,2,96	1/1:20,0:17:50.97:686,51,0	1/1:2,7:11:10.85:403,11,0	1/1:3,0:3:6.01:85,6,0
chr10	53184558	.	GA	G	3702.61	PASS	AB=0.889;AC=15;AF=0.268;AN=56;BaseQRankSum=11.297;DP=666;FS=5.348;HRun=10;HaplotypeScore=69.6506;InbreedingCoeff=0.9406;MQ=81.67;MQ0=0;MQRankSum=-2.008;QD=20.57;ReadPosRankSum=0.651;VQSLOD=4.6668;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:56,2:58:99:0,118,1565	0/1:7,1:8:2:2,0,200	0/0:23,0:23:40.96:0,41,403	0/0:23,0:24:18.63:0,19,225	1/1:2,28:31:82.96:702,83,0	1/1:4,16:20:41.98:365,42,0	1/1:2,20:22:47.99:417,48,0	1/1:3,29:33:85.88:707,86,0	1/1:0,20:20:56.99:495,57,0	0/0:22,0:22:48.12:0,48,525	0/0:20,0:20:39.07:0,39,407	0/0:21,0:21:63.15:0,63,681	0/0:29,0:29:81.10:0,81,828	1/1:1,26:27:68.98:599,69,0	0/0:30,0:30:75.19:0,75,823	0/0:19,0:19:54.12:0,54,580	0/0:30,0:30:52.20:0,52,777	0/0:31,0:31:84.21:0,84,918	0/0:23,0:26:71.84:0,72,748	0/0:19,0:19:45.11:0,45,483	0/0:21,0:21:48.13:0,48,531	0/0:15,0:15:45.12:0,45,498	0/0:18,0:18:42.11:0,42,465	0/0:22,0:22:54.13:0,54,588	1/1:1,18:19:47.99:416,48,0	0/0:28,0:28:72.17:0,72,785	0/0:23,0:23:60.16:0,60,664	0/0:6,0:6:18.05:0,18,199
chr10	53184885	.	G	GA	9851.38	PASS	AB=0.594;AC=32;AF=0.571;AN=56;BaseQRankSum=-13.512;DP=662;FS=1.354;HRun=9;HaplotypeScore=57.2110;InbreedingCoeff=0.8470;MQ=71.56;MQ0=0;MQRankSum=-2.377;QD=24.81;ReadPosRankSum=1.168;VQSLOD=5.6225;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,104,910	0/0:13,0:13:35.96:0,36,305	0/0:17,0:17:38.48:0,38,319	0/0:7,0:7:5.97:0,6,50	1/1:3,21:24:63.13:683,63,0	1/1:1,29:29:75.20:830,75,0	1/1:6,13:20:6.09:333,6,0	1/1:8,21:29:57.11:604,57,0	1/1:2,18:20:48.11:521,48,0	0/1:10,21:31:3:643,0,3	1/1:6,18:24:8.09:545,8,0	0/0:29,0:30:80.02:0,80,683	0/0:21,0:21:53.93:0,54,462	1/1:2,20:22:57.15:629,57,0	0/0:24,0:26:70.02:0,70,576	0/0:38,0:38:99:0,105,902	1/1:1,20:21:54.15:597,54,0	1/1:4,16:20:42.11:465,42,0	1/1:1,15:16:45.12:498,45,0	1/1:2,24:25:72.15:783,72,0	1/1:0,11:11:33.09:364,33,0	0/0:23,0:24:65.01:0,65,553	0/0:25,0:25:62.97:0,63,543	0/0:24,0:25:71.01:0,71,605	1/1:4,23:27:57.38:718,57,0	0/1:9,20:29:9.01:577,0,9	1/1:7,29:36:49.14:762,49,0	1/1:0,11:11:27.07:299,27,0
chr10	53186309	.	A	AT	276.03	PASS	AB=0.929;AC=3;AF=0.054;AN=56;BaseQRankSum=-4.297;DP=385;FS=2.150;HRun=10;HaplotypeScore=64.1406;InbreedingCoeff=0.5760;MQ=88.13;MQ0=2;MQRankSum=0.691;QD=7.89;ReadPosRankSum=-3.430;VQSLOD=1.3428;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:26.94:0,27,222	0/0:6,0:6:17.98:0,18,148	0/0:26,0:26:19.64:0,20,145	0/0:16,0:12:2.03:0,2,47	0/0:14,0:14:38.94:0,39,318	0/0:21,0:22:47.90:0,48,391	0/0:12,0:12:29.95:0,30,246	1/1:8,14:22:17.36:366,17,0	0/0:8,0:8:23.95:0,24,193	0/0:12,0:12:31.21:0,31,249	0/0:14,0:14:41.94:0,42,342	0/0:7,0:7:20.91:0,21,163	0/0:10,0:10:26.96:0,27,222	0/0:16,0:16:44.93:0,45,366	0/0:21,0:21:53.92:0,54,443	0/0:13,0:14:31.95:0,32,245	0/0:11,0:10:20.01:0,20,154	0/1:12,1:12:2.02:2,0,192	0/0:16,0:16:41.88:0,42,343	0/0:10,0:10:26.94:0,27,221	0/0:7,0:7:15.45:0,15,125	0/0:10,0:11:31.97:0,32,246	0/0:20,0:20:56.93:0,57,468	0/0:2,0:2:5.99:0,6,49	0/0:12,0:13:38:0,38,302	0/0:14,0:14:41.95:0,42,344	0/0:19,0:19:53.43:0,53,427	0/0:13,0:13:29.51:0,30,223
chr10	53188535	.	AGG	A	3816.72	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=5.915;DP=597;FS=36.317;HRun=11;HaplotypeScore=89.3765;InbreedingCoeff=0.9955;MQ=70.83;MQ0=1;MQRankSum=-0.367;QD=17.92;ReadPosRankSum=8.458;VQSLOD=-0.5286;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:50.66:0,51,669	0/0:15,0:15:24.08:0,24,369	0/0:18,0:20:38.05:0,38,385	0/0:20,0:20:44.86:0,45,397	0/0:22,0:22:38.40:0,38,442	0/0:26,0:26:30.10:0,30,458	0/0:16,0:19:38.10:0,38,521	0/0:14,0:29:45.05:0,45,217	0/0:19,0:19:35.95:0,36,460	1/1:11,17:28:50.81:531,51,0	1/1:1,13:14:30.07:319,30,0	0/0:24,0:25:35.58:0,36,437	0/0:18,0:18:24.01:0,24,261	0/0:16,0:16:25.87:0,26,330	0/0:17,0:18:29.59:0,30,422	0/0:26,0:27:56.25:0,56,754	1/1:5,0:26:46.60:203,47,0	1/1:3,0:29:66.27:287,66,0	1/1:5,13:18:42.04:430,42,0	1/1:2,9:11:21:211,21,0	1/1:5,17:22:36.07:383,36,0	0/0:21,0:22:38.59:0,39,487	0/0:11,0:12:17.55:0,18,236	0/0:26,0:26:45.10:0,45,642	0/0:13,0:13:27.09:0,27,403	1/1:7,22:29:39.43:627,39,0	1/1:6,19:25:60.13:634,60,0	1/1:4,7:10:18.04:192,18,0
chr10	53188545	.	GGA	G	639.65	PASS	AB=0.973;AC=10;AF=0.179;AN=56;BaseQRankSum=9.188;DP=532;FS=52.227;HRun=0;HaplotypeScore=91.6958;InbreedingCoeff=0.2343;MQ=72.68;MQ0=1;MQRankSum=0.024;QD=4.35;ReadPosRankSum=8.357;VQSLOD=-0.2147;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:80.60:0,81,1051	0/0:12,0:12:27.07:0,27,389	0/0:22,0:21:51.60:0,52,654	0/0:22,0:21:49.65:0,50,580	0/0:18,0:18:44.91:0,45,563	0/0:19,0:19:42.45:0,42,536	0/0:20,0:20:56.74:0,57,671	0/0:31,0:31:81.88:0,82,657	0/0:14,0:14:36.09:0,36,548	0/1:20,1:21:17.63:147,0,18	0/1:14,0:14:4.47:89,0,4	0/0:15,0:15:37.25:0,37,436	0/0:14,0:13:32.99:0,33,402	0/0:11,0:11:7.70:0,8,356	0/0:16,0:16:38.92:0,39,535	0/0:27,0:27:65.79:0,66,891	0/0:22,0:22:30.71:0,31,127	0/0:30,0:30:22.68:0,23,137	0/1:16,1:17:33.10:39,0,33	0/1:15,1:16:50.13:50,0,129	1/1:19,0:19:5.79:77,6,0	0/0:16,0:16:41.81:0,42,573	0/0:8,0:8:20.94:0,21,292	0/0:23,0:23:57.04:0,57,791	0/0:12,0:12:30.09:0,30,463	0/1:26,0:26:31.29:154,0,31	1/1:22,1:23:5.71:196,6,0	0/1:11,0:10:32.79:33,0,49
chr10	53189521	.	A	AG	15574.40	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-16.895;DP=789;FS=2.236;HRun=3;HaplotypeScore=68.9734;InbreedingCoeff=0.9944;MQ=82.92;MQ0=0;MQRankSum=-3.179;QD=35.89;ReadPosRankSum=-0.043;VQSLOD=5.3241;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:62,0:62:99:0,184,2179	0/0:4,0:4:12.04:0,12,144	0/0:17,0:17:44.85:0,45,492	0/0:29,0:28:71.75:0,72,803	1/1:2,20:22:54.18:756,54,0	1/1:1,18:19:48.16:672,48,0	1/1:2,28:30:78.26:1092,78,0	1/1:5,26:31:81.24:1085,81,0	1/1:2,36:38:99:1426,102,0	1/1:0,26:26:72.24:1006,72,0	1/1:1,20:21:60.20:835,60,0	0/0:31,0:31:90.28:0,90,1080	0/0:34,0:34:99:0,99,1163	1/1:1,30:31:84.28:1175,84,0	0/0:49,0:49:99:0,141,1669	0/0:42,0:42:99:0,120,1417	1/1:3,39:42:99:1468,105,0	1/1:1,25:26:63.21:882,63,0	1/1:2,12:14:36.11:486,36,0	1/1:1,19:20:48.16:670,48,0	1/1:1,20:21:51.17:714,51,0	0/0:28,0:28:74.82:0,75,873	0/0:17,0:17:42.13:0,42,503	0/0:42,0:42:99:0,126,1501	1/1:1,22:23:45.15:630,45,0	1/1:0,36:36:99:1511,108,0	1/1:1,26:26:66.22:914,66,0	1/1:0,7:7:18.06:252,18,0
chr10	53189810	.	G	GT	1052.32	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=2.917;DP=659;FS=3.353;HRun=3;HaplotypeScore=84.3751;InbreedingCoeff=0.9877;MQ=74.07;MQ0=0;MQRankSum=-0.806;QD=26.98;ReadPosRankSum=1.847;VQSLOD=3.0376;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,126,1422	0/0:10,0:10:24.07:0,24,287	0/0:17,0:16:39.08:0,39,423	0/0:20,0:20:19.36:0,19,374	0/0:29,0:29:62.80:0,63,893	0/0:20,0:20:60.12:0,60,669	0/0:30,0:30:87.18:0,87,966	0/0:31,0:31:72.21:0,72,854	0/0:26,0:26:75.22:0,75,888	0/0:21,0:21:57.08:0,57,638	0/0:18,0:18:54.11:0,54,603	0/0:20,0:20:60.14:0,60,692	0/0:18,0:18:38.80:0,39,557	0/0:23,0:23:66.15:0,66,744	0/0:28,0:28:75.21:0,75,878	0/0:18,0:18:48.11:0,48,544	1/1:3,17:20:38.67:545,39,0	1/1:3,16:19:45.15:629,45,0	0/0:22,0:22:60.15:0,60,680	0/0:16,0:16:39.08:0,39,435	0/0:25,0:25:60.15:0,60,695	0/0:24,0:24:72.18:0,72,836	0/0:21,0:21:60.15:0,60,694	0/0:43,0:43:99:0,120,1336	0/0:32,0:32:84.24:0,84,994	0/0:26,0:26:75.20:0,75,869	0/0:33,0:33:84.23:0,84,984	0/0:5,0:5:15.05:0,15,179
chr10	53191139	.	AGGC	A	775.22	PASS	AC=4;AF=0.125;AN=32;BaseQRankSum=5.180;DP=151;FS=23.943;HRun=0;HaplotypeScore=27.8077;InbreedingCoeff=0.5582;MQ=61.86;MQ0=0;MQRankSum=1.369;QD=28.71;ReadPosRankSum=3.549;VQSLOD=1.2353;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:4:9.03:0,9,186	./.	./.	0/0:5,0:4:11.91:0,12,187	./.	./.	0/0:28,0:28:81.25:0,81,1554	./.	0/0:5,0:5:15.05:0,15,277	./.	./.	0/0:6,0:6:15.05:0,15,310	0/0:1,0:1:3.01:0,3,60	0/0:5,0:5:9.03:0,9,186	0/0:3,0:3:3.01:0,3,62	0/0:1,0:1:3.01:0,3,62	1/1:3,10:13:30.10:441,30,0	1/1:2,12:14:30.10:442,30,0	0/0:3,0:2:2.99:0,3,23	./.	0/0:27,0:27:42.09:0,42,790	./.	0/0:2,0:2:6.02:0,6,122	0/0:20,0:20:54.19:0,54,1086	0/0:1,0:1:3.01:0,3,46	./.	./.	./.
chr10	53193546	.	AATAGTCCCAC	A	11621.71	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=16.689;DP=686;FS=4.340;HRun=0;HaplotypeScore=209.3338;InbreedingCoeff=0.9998;MQ=80.25;MQ0=0;MQRankSum=-14.945;QD=75.96;ReadPosRankSum=0.192;VQSLOD=4.5998;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:87.30:0,87,4316	0/0:9,0:9:27.09:0,27,1299	0/0:27,0:27:78.10:0,78,3316	0/0:21,0:20:57.19:0,57,2449	1/1:1,15:16:41.96:1104,42,0	1/1:2,23:25:63.22:2019,63,0	1/1:0,16:16:48.16:1547,48,0	1/1:6,27:33:81.17:2061,81,0	1/1:4,18:22:51.18:1663,51,0	0/0:38,0:38:99:0,111,5452	0/0:19,0:19:57.20:0,57,2970	0/0:33,0:33:93.29:0,93,4572	0/0:26,0:26:78.23:0,78,3791	1/1:4,15:19:39.13:1271,39,0	0/0:26,0:26:78.25:0,78,3856	0/0:20,0:20:54.19:0,54,2625	0/0:25,0:25:69.24:0,69,3297	0/0:31,0:31:93.32:0,93,4546	0/0:30,0:30:84.28:0,84,3852	0/0:20,0:20:60.19:0,60,2945	0/0:31,0:31:84.29:0,84,4346	0/0:23,0:23:66.23:0,66,3425	0/0:20,0:20:60.21:0,60,3129	0/0:32,0:32:93.32:0,93,4584	1/1:1,21:22:60.21:1957,60,0	0/0:24,0:24:66.23:0,66,3383	0/0:23,0:23:66.21:0,66,3263	0/0:23,0:23:69.24:0,69,3364
chr10	53195420	.	GT	G	5695.86	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=10.636;DP=649;FS=22.561;HRun=5;HaplotypeScore=104.5733;InbreedingCoeff=0.9911;MQ=71.63;MQ0=5;MQRankSum=-5.720;QD=24.34;ReadPosRankSum=2.588;VQSLOD=3.2924;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:85.07:0,85,1102	0/0:7,0:7:12.04:0,12,154	0/0:32,0:19:14.94:0,15,398	0/0:32,0:21:20.96:0,21,303	1/1:0,24:23:63.16:684,63,0	1/1:12,20:32:87.15:945,87,0	1/1:5,13:18:44.45:465,44,0	1/1:19,26:45:99:993,107,0	1/1:10,16:26:61.98:674,62,0	0/0:20,0:20:39.59:0,40,517	0/0:13,0:13:33.11:0,33,435	0/0:20,0:20:51.57:0,52,664	0/0:16,0:16:39.08:0,39,508	1/1:8,13:21:32.32:374,32,0	0/0:19,0:19:43.08:0,43,567	0/0:17,0:17:46.38:0,46,581	1/1:12,20:31:50.58:631,51,0	1/1:2,9:11:30.02:303,30,0	0/0:29,0:29:68.81:0,69,885	0/0:28,0:29:68.98:0,69,839	0/0:11,0:11:20.84:0,21,222	0/0:19,0:19:48.10:0,48,565	0/0:22,0:22:57.06:0,57,717	0/0:17,0:17:42.10:0,42,528	1/1:10,15:24:61.20:626,61,0	0/0:30,0:30:72.13:0,72,929	0/0:24,0:25:41.24:0,41,508	0/0:23,0:23:51.15:0,51,674
chr10	53195423	.	TTTG	T	3836.49	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=6.926;DP=657;FS=6.670;HRun=0;HaplotypeScore=132.0747;InbreedingCoeff=0.7278;MQ=70.21;MQ0=7;MQRankSum=-1.218;QD=16.54;ReadPosRankSum=0.071;VQSLOD=3.0299;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:74.69:0,75,1276	0/0:5,0:5:14.88:0,15,148	0/0:40,0:22:39.98:0,40,440	0/0:33,1:21:2.96:0,3,289	1/1:26,0:25:68.32:712,68,0	1/1:30,0:30:84:794,84,0	1/1:14,4:18:47.43:558,47,0	0/1:42,0:42:4.55:5,0,175	1/1:27,0:27:69.89:698,70,0	0/0:21,0:21:46.54:0,47,573	0/0:15,0:15:31.77:0,32,346	0/0:19,0:19:46.61:0,47,734	0/0:15,0:14:39.02:0,39,537	1/1:14,5:19:37.07:397,37,0	0/0:21,0:21:30.03:0,30,743	0/0:16,0:16:45.02:0,45,677	0/1:31,0:30:38.24:52,0,38	0/1:13,0:13:3.62:4,0,14	0/0:27,0:27:74.52:0,75,749	0/0:30,0:30:69.25:0,69,860	0/0:12,0:12:5.78:0,6,173	0/0:21,0:21:50.70:0,51,684	0/0:22,0:22:62.84:0,63,865	0/0:17,0:17:42.09:0,42,642	1/1:26,0:25:66.25:616,66,0	0/0:32,0:31:76.77:0,77,958	0/0:24,0:24:43.96:0,44,522	0/0:23,0:23:51.01:0,51,628
chr10	53195426	.	G	GT	1990.40	PASS	AB=0.827;AC=24;AF=0.429;AN=56;BaseQRankSum=-3.193;DP=660;FS=22.999;HRun=15;HaplotypeScore=118.5403;InbreedingCoeff=0.2574;MQ=66.68;MQ0=7;MQRankSum=-1.709;QD=5.08;ReadPosRankSum=-4.363;VQSLOD=-0.6900;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:30,2:33:24.38:24,0,281	0/1:3,1:5:14.31:14,0,29	0/0:38,0:20:2.96:0,3,74	0/1:34,0:19:18.44:18,0,73	0/0:10,0:26:8.54:0,9,56	0/0:12,0:30:42.59:0,43,122	0/0:5,0:18:30.96:0,31,90	1/1:42,0:42:40.15:180,40,0	0/0:10,0:27:37.81:0,38,106	1/1:6,16:23:28.51:304,29,0	1/1:6,9:15:17.82:134,18,0	0/1:18,0:19:12.05:12,0,123	0/1:12,2:13:25.53:26,0,85	0/0:9,0:19:17.93:0,18,51	0/0:19,0:20:37.34:0,37,220	0/1:12,1:15:7.93:8,0,151	1/1:24,0:28:44.42:198,44,0	1/1:13,0:13:26.51:112,27,0	1/1:13,5:27:34.56:264,35,0	1/1:12,19:33:20.28:344,20,0	0/1:5,6:11:11.99:19,0,12	0/0:17,2:21:15.04:0,15,195	0/0:18,0:21:39.13:0,39,223	0/0:17,0:20:41.33:0,41,222	0/0:10,0:25:15.78:0,16,68	0/1:21,9:30:21.04:238,0,21	0/1:11,12:24:23.49:121,0,23	0/1:10,13:23:21.08:168,0,21
chr10	53195429	.	T	TTTG	1555.19	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=3.363;DP=667;FS=19.353;HRun=0;HaplotypeScore=143.0757;InbreedingCoeff=0.7533;MQ=63.86;MQ0=7;MQRankSum=-1.463;QD=18.74;ReadPosRankSum=0.034;VQSLOD=2.2442;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:91.05:0,91,1213	0/0:5,0:5:12:0,12,154	0/0:42,0:18:32.10:0,32,255	0/0:39,0:19:38.64:0,39,360	0/0:28,0:27:39.96:0,40,581	0/0:27,0:30:35.15:0,35,668	0/0:19,0:19:48.17:0,48,499	0/1:42,0:42:55.21:292,0,55	0/0:27,0:27:33.44:0,33,585	0/0:23,0:23:55.05:0,55,406	0/0:14,0:14:27.26:0,27,201	0/0:18,0:18:50.45:0,50,645	0/0:14,0:13:36:0,36,435	0/0:19,0:19:36.34:0,36,317	0/0:21,0:21:52.31:0,52,743	0/0:15,0:15:45.07:0,45,642	1/1:10,16:25:64.48:904,64,0	1/1:2,11:15:29.44:489,29,0	0/0:25,0:25:56.03:0,56,388	0/0:35,0:35:78.18:0,78,604	0/0:11,0:11:14.98:0,15,150	0/0:23,0:23:60.02:0,60,783	0/0:21,0:21:56.94:0,57,726	0/0:19,0:19:50.52:0,51,721	0/0:24,0:23:12.09:0,12,483	0/0:31,0:30:81.75:0,82,764	0/0:25,0:24:39.55:0,40,363	0/0:21,0:21:38.77:0,39,363
chr10	53195431	.	T	TG	1043.63	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=5.828;DP=663;FS=12.012;HRun=0;HaplotypeScore=118.7776;InbreedingCoeff=0.9373;MQ=63.80;MQ0=7;MQRankSum=-2.366;QD=12.42;ReadPosRankSum=1.223;VQSLOD=4.4775;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:88.57:0,89,1017	0/0:4,0:4:10.27:0,10,111	0/0:43,0:19:17.26:0,17,216	0/0:39,0:19:36.18:0,36,322	0/0:30,0:29:77.04:0,77,592	0/0:30,0:30:83.43:0,83,668	0/0:21,0:21:53.85:0,54,434	1/1:28,15:43:97.38:980,97,0	0/0:26,0:26:74.69:0,75,595	0/0:23,0:23:27.92:0,28,253	0/0:12,0:12:15.01:0,15,111	0/0:18,0:18:51.13:0,51,554	0/0:13,0:12:32.19:0,32,357	0/0:19,0:19:38.85:0,39,310	0/0:22,0:22:57.08:0,57,674	0/0:15,0:15:42.16:0,42,502	1/1:26,0:25:11.52:129,12,0	1/1:15,0:15:10.48:68,10,0	0/0:24,0:24:51.61:0,52,368	0/0:34,0:34:44.89:0,45,397	0/0:10,0:10:12.90:0,13,123	0/0:23,0:23:53.84:0,54,656	0/0:21,0:21:60.04:0,60,688	0/0:19,0:19:51.12:0,51,624	0/0:24,0:23:65.51:0,66,523	0/0:30,0:29:66.89:0,67,538	0/0:25,0:24:30.16:0,30,312	0/0:21,0:21:25.69:0,26,235
chr10	53195782	.	CAT	C	206.41	PASS	AB=0.918;AC=8;AF=0.154;AN=52;BaseQRankSum=0.413;DP=459;FS=39.331;HRun=0;HaplotypeScore=87.6654;InbreedingCoeff=0.0826;MQ=33.15;MQ0=81;MQRankSum=-2.380;QD=2.13;ReadPosRankSum=-3.441;VQSLOD=-0.5418;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:14.67:0,15,157	0/1:3,1:3:28.26:28,0,54	./.	./.	0/0:19,3:19:15.84:0,16,204	0/0:15,0:12:16.94:0,17,263	0/0:14,0:11:18.06:0,18,293	0/0:18,0:10:26.13:0,26,211	0/1:16,1:15:24.95:25,0,51	0/0:29,0:23:46.93:0,47,645	0/0:15,3:18:17.90:0,18,224	0/1:13,1:8:0:0,0,0	0/0:16,1:16:4.98:0,5,249	0/0:12,0:9:1.77:0,2,4	1/1:10,0:7:5.99:49,6,0	0/0:12,0:10:2.95:0,3,201	0/0:10,0:5:8.84:0,9,71	0/1:10,0:3:35.44:39,0,35	0/0:18,1:15:2.39:0,2,423	0/0:17,0:15:23.98:0,24,334	0/0:17,0:10:15:0,15,174	0/0:11,0:9:4.83:0,5,55	0/0:17,0:15:9.03:0,9,130	0/0:23,1:18:11.80:0,12,133	0/0:17,1:12:12.84:0,13,138	0/1:28,3:28:99:163,0,643	0/1:10,1:10:19.13:25,0,19	0/0:20,0:13:25.32:0,25,337
chr10	53195798	.	CAT	C	389.17	PASS	AB=0.931;AC=13;AF=0.250;AN=52;BaseQRankSum=1.939;DP=450;FS=7.285;HRun=0;HaplotypeScore=83.5382;InbreedingCoeff=-0.0755;MQ=33.33;MQ0=85;MQRankSum=-2.991;QD=2.43;ReadPosRankSum=-2.341;VQSLOD=0.4423;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:13:11.34:0,11,157	0/1:5,1:5:38.72:75,0,39	./.	./.	0/0:24,0:19:21.68:0,22,256	0/0:15,0:12:18.06:0,18,272	0/0:16,0:13:17.90:0,18,306	0/1:11,5:10:61.29:166,0,61	0/0:13,0:10:11.29:0,11,109	0/1:26,1:21:13.94:14,0,539	0/0:16,4:19:19.75:0,20,237	1/1:10,6:9:2.37:8,2,0	0/0:14,1:15:0.17:0,0,280	0/0:14,0:10:2.09:0,2,5	1/1:7,0:5:0.96:20,1,0	0/1:12,0:10:65.99:66,0,159	0/0:10,0:5:9.01:0,9,92	0/1:11,0:3:27.78:35,0,28	0/0:15,1:13:28.73:0,29,409	0/1:17,0:15:1.54:2,0,374	0/0:15,1:9:14.99:0,15,149	0/1:12,0:9:25.31:25,0,60	0/0:14,0:13:14.98:0,15,163	0/0:22,3:18:14.30:0,14,121	0/0:20,0:12:15.89:0,16,184	0/1:24,3:23:88.24:88,0,648	0/1:8,1:8:27.14:27,0,40	0/0:20,0:13:26.30:0,26,336
chr10	53195800	.	TTCTCTC	T	423.76	PASS	AB=0.951;AC=15;AF=0.341;AN=44;BaseQRankSum=-0.594;DP=463;FS=15.662;HRun=0;HaplotypeScore=99.2127;InbreedingCoeff=0.0326;MQ=33.40;MQ0=91;MQRankSum=-1.919;QD=2.22;ReadPosRankSum=1.532;VQSLOD=0.7439;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:14:3:0,3,27	1/1:5,1:5:0.30:1,0,0	./.	./.	0/0:22,0:17:0.94:0,1,2	0/0:17,0:13:5.91:0,6,63	0/0:15,0:12:9.01:0,9,92	./.	0/0:12,0:10:6.02:0,6,92	0/1:26,0:19:34.44:110,0,34	0/1:20,0:19:0.01:0,0,0	1/1:17,0:10:6.02:107,6,0	0/1:11,0:15:48.14:53,0,48	0/0:14,0:10:6.48:0,6,65	0/0:9,0:6:2.33:0,2,22	1/1:12,1:10:4.57:64,5,0	0/0:11,0:6:3.01:0,3,42	0/0:14,0:6:5.14:0,5,46	0/0:20,0:13:3.01:0,3,63	0/1:17,0:14:19.97:27,0,20	./.	0/1:11,2:9:30.90:50,0,31	./.	1/1:27,0:19:5.91:68,6,0	0/0:20,0:12:0:0,0,0	0/1:27,0:23:19.27:31,0,19	0/1:10,0:8:11.62:37,0,12	./.
chr10	53195841	.	TCTCTCTCTCTC	T	1531.39	PASS	AB=1.000;AC=18;AF=0.321;AN=56;BaseQRankSum=3.272;DP=410;FS=21.824;HRun=0;HaplotypeScore=106.1740;InbreedingCoeff=0.4570;MQ=47.99;MQ0=69;MQRankSum=-1.694;QD=8.65;ReadPosRankSum=2.289;VQSLOD=0.6169;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:12:14.94:0,15,229	0/0:7,0:6:18.05:0,18,207	0/0:10,0:3:5.85:0,6,67	0/0:18,0:8:17.08:0,17,150	1/1:7,0:6:0.31:1,0,0	0/1:17,0:14:10.95:11,0,89	0/0:18,0:12:21.30:0,21,220	0/1:12,0:8:27.33:27,0,64	0/0:10,0:9:11.73:0,12,97	1/1:11,14:17:4.38:517,4,0	1/1:10,9:15:3.44:22,3,0	0/0:16,0:14:24.55:0,25,305	0/0:12,0:12:20.33:0,20,263	0/0:11,0:9:4.15:0,4,57	0/0:16,0:15:37.91:0,38,472	0/0:13,0:11:29.22:0,29,406	0/0:13,0:10:21.06:0,21,289	0/0:15,0:12:32.13:0,32,421	0/1:17,0:11:31.17:161,0,31	1/1:3,15:16:8.21:135,8,0	1/1:16,0:8:9.02:127,9,0	0/0:15,0:13:0.85:0,1,133	0/0:10,0:9:15.05:0,15,201	0/0:26,0:19:29.29:0,29,352	0/0:8,0:7:6.49:0,6,64	1/1:10,11:16:27.36:443,27,0	1/1:14,2:12:8.92:208,9,0	0/1:9,0:4:30:49,0,30
chr10	53195851	.	TC	T	949.30	PASS	AB=0.909;AC=17;AF=0.304;AN=56;BaseQRankSum=3.487;DP=446;FS=18.172;HRun=8;HaplotypeScore=78.4240;InbreedingCoeff=0.7185;MQ=53.30;MQ0=55;MQRankSum=-2.099;QD=5.65;ReadPosRankSum=2.930;VQSLOD=0.1769;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:11:18.04:0,18,198	0/0:9,0:8:21.06:0,21,242	0/0:19,0:8:17.86:0,18,189	0/0:28,0:17:29.06:0,29,281	0/0:12,0:11:2.72:0,3,27	0/1:16,2:17:2.30:2,0,164	0/0:19,0:13:12.77:0,13,181	0/1:14,0:10:21.85:48,0,22	0/0:13,0:12:14.95:0,15,129	1/1:21,2:16:29.93:266,30,0	0/1:16,2:15:0:0,0,0	0/0:16,0:15:33.22:0,33,343	0/0:15,0:15:26.47:0,26,277	0/0:10,0:10:12.61:0,13,127	0/0:19,0:18:46.88:0,47,482	0/0:15,0:14:40.91:0,41,427	0/0:10,0:10:26.91:0,27,294	0/0:16,0:15:35.75:0,36,375	1/1:4,11:10:26.94:246,27,0	1/1:18,1:16:5.99:56,6,0	1/1:4,8:5:12.02:115,12,0	0/0:14,0:13:24.91:0,25,238	0/0:15,0:14:33.10:0,33,385	0/0:21,0:18:35.85:0,36,326	0/0:9,0:9:4.84:0,5,82	1/1:19,1:16:29.95:270,30,0	1/1:15,1:12:5.94:41,6,0	1/1:3,8:7:9.01:86,9,0
chr10	53195852	.	C	CT	959.73	PASS	AB=0.942;AC=17;AF=0.304;AN=56;BaseQRankSum=2.990;DP=459;FS=12.167;HRun=1;HaplotypeScore=84.6626;InbreedingCoeff=0.7167;MQ=55.73;MQ0=55;MQRankSum=-0.518;QD=5.65;ReadPosRankSum=3.323;VQSLOD=-0.5798;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:10:21.03:0,21,222	0/0:11,0:10:20.93:0,21,225	0/0:20,0:9:17.85:0,18,190	0/0:33,0:19:29.16:0,29,288	0/0:12,0:11:2.72:0,3,27	0/1:19,0:17:2.74:3,0,162	0/0:21,0:14:12.76:0,13,177	0/1:14,0:10:21.95:48,0,22	0/0:14,0:13:17.91:0,18,148	1/1:21,2:16:30.02:285,30,0	0/1:15,4:15:0:0,0,0	0/0:14,0:14:33.55:0,34,375	0/0:14,0:14:26.47:0,26,290	0/0:10,0:10:12.64:0,13,127	0/0:19,0:18:46.91:0,47,474	0/0:15,0:14:41.32:0,41,448	0/0:12,0:11:18.40:0,18,272	0/0:17,0:16:35.62:0,36,354	1/1:14,1:10:25.47:221,25,0	1/1:18,1:16:5.99:56,6,0	1/1:10,2:5:12.02:115,12,0	0/0:16,0:14:18.62:0,19,246	0/0:17,0:16:33.10:0,33,386	0/0:22,0:19:35.86:0,36,329	0/0:9,0:9:4.84:0,5,82	1/1:17,3:16:26.20:258,26,0	1/1:4,13:13:6:69,6,0	1/1:11,1:8:9.01:86,9,0
chr10	53196049	.	G	GT	7497.99	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-11.686;DP=649;FS=1.030;HRun=4;HaplotypeScore=57.7919;InbreedingCoeff=0.9989;MQ=76.18;MQ0=0;MQRankSum=-3.251;QD=33.77;ReadPosRankSum=-1.008;VQSLOD=4.9282;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:57.14:0,57,635	0/0:8,0:8:21.06:0,21,238	0/0:15,0:15:36.08:0,36,398	0/0:12,0:12:29.99:0,30,311	1/1:3,33:36:90.26:1210,90,0	1/1:0,27:27:75.25:1026,75,0	1/1:2,16:18:45.15:616,45,0	1/1:3,27:30:81.22:1042,81,0	1/1:1,23:24:57.19:780,57,0	0/0:24,0:23:69.20:0,69,782	0/0:25,0:25:63.18:0,63,714	0/0:30,0:30:87.25:0,87,987	0/0:19,0:19:45.13:0,45,510	1/1:1,13:14:39.13:528,39,0	0/0:29,0:29:84.24:0,84,953	0/0:22,0:22:60.17:0,60,680	1/1:2,25:27:63.21:862,63,0	1/1:1,21:22:54.18:738,54,0	0/0:27,0:27:69.19:0,69,783	0/0:39,0:39:99:0,105,1190	0/0:12,0:12:36.10:0,36,408	0/0:31,0:31:87.18:0,87,951	0/0:26,0:26:72.20:0,72,816	0/0:18,0:18:51.14:0,51,578	1/1:3,21:24:51.17:696,51,0	0/0:33,0:33:96.26:0,96,1077	0/0:29,0:29:78.22:0,78,884	0/0:8,0:8:24.07:0,24,272
chr10	53197679	.	T	TG	1798.80	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.633;DP=693;FS=0.000;HRun=6;HaplotypeScore=73.0012;InbreedingCoeff=0.9840;MQ=74.00;MQ0=0;MQRankSum=-0.311;QD=29.01;ReadPosRankSum=1.153;VQSLOD=4.2537;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,150,1530	0/0:15,0:15:39.07:0,39,390	0/0:20,0:20:47.10:0,47,521	0/0:16,0:16:48.10:0,48,485	0/0:28,0:28:69.14:0,69,703	0/0:23,0:23:60.12:0,60,606	0/0:20,0:20:54.12:0,54,550	0/0:32,0:32:84.17:0,84,847	0/0:34,0:34:96.21:0,96,979	0/0:17,0:17:42.08:0,42,422	0/0:12,0:12:30.07:0,30,306	0/0:38,0:38:96.21:0,96,977	0/0:29,0:29:75.14:0,75,755	0/0:26,0:26:72.16:0,72,734	0/0:28,0:28:81.18:0,81,826	0/0:21,0:21:63.14:0,63,643	1/1:5,37:41:99:1354,108,0	1/1:3,17:20:45.14:566,45,0	0/0:16,0:16:45.10:0,45,459	0/0:19,0:19:54.12:0,54,549	0/0:31,0:31:81.18:0,81,824	0/0:17,0:17:51.11:0,51,519	0/0:22,0:22:48.09:0,48,489	0/0:22,0:22:60.13:0,60,612	0/0:32,0:32:84.18:0,84,854	0/0:29,0:29:72.15:0,72,729	0/0:27,0:27:72.16:0,72,734	0/0:4,0:4:12.03:0,12,122
chr10	53197903	.	AT	A	4737.64	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-0.942;DP=698;FS=1.833;HRun=10;HaplotypeScore=86.6743;InbreedingCoeff=0.9924;MQ=76.25;MQ0=0;MQRankSum=-5.218;QD=21.25;ReadPosRankSum=0.533;VQSLOD=5.4996;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:36:99:0,99,1066	0/0:14,0:14:39.11:0,39,431	0/0:41,0:39:69.38:0,69,711	0/0:12,0:11:23.45:0,23,222	1/1:3,25:28:77.96:672,78,0	1/1:4,18:22:44.96:391,45,0	1/1:3,19:22:50.98:443,51,0	1/1:6,16:22:47.90:404,48,0	1/1:1,19:20:50.98:443,51,0	0/0:8,0:28:69:0,69,410	0/0:4,0:29:71.54:0,72,386	0/0:22,0:22:48.13:0,48,531	0/0:22,0:22:60.16:0,60,664	1/1:2,30:32:47.80:644,48,0	0/0:23,0:23:60.16:0,60,664	0/0:18,0:18:51.14:0,51,564	1/1:3,36:39:98.98:860,99,0	1/1:1,15:16:47.97:413,48,0	0/0:8,0:21:58.09:0,58,393	0/0:4,0:31:82.91:0,83,447	0/0:5,0:26:57.14:0,57,314	0/0:24,0:24:62.75:0,63,667	0/0:33,2:35:16.87:0,17,848	0/0:19,0:19:51.14:0,51,564	1/1:1,21:22:53.99:469,54,0	0/0:4,0:39:99:0,100,508	0/0:3,0:29:67.71:0,68,334	0/0:0,0:5:11.36:0,11,57
chr10	53198611	.	GGGGTTGAAA	G	15531.98	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=18.058;DP=800;FS=4.147;HRun=0;HaplotypeScore=235.9878;InbreedingCoeff=0.9895;MQ=77.55;MQ0=0;MQRankSum=-17.322;QD=70.28;ReadPosRankSum=3.316;VQSLOD=4.8237;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:93.30:0,93,4192	0/0:18,0:18:51.18:0,51,2488	0/0:27,0:27:77.29:0,77,3291	0/0:16,0:16:42.14:0,42,1794	0/0:46,0:46:99:0,129,6131	0/0:34,0:34:99:0,99,4752	0/0:23,0:23:63.22:0,63,3007	0/0:37,0:37:99:0,102,4814	0/0:24,0:24:72.25:0,72,3420	1/1:3,38:41:99:3324,111,0	1/1:2,30:32:63.22:1945,63,0	0/0:26,0:26:78.27:0,78,3806	0/0:36,0:36:99:0,108,4795	0/0:29,0:29:87.30:0,87,4127	0/0:36,0:36:99:0,105,4785	0/0:40,0:40:99:0,120,5426	0/0:29,0:29:87.30:0,87,4019	0/0:14,0:14:42.14:0,42,1774	1/1:5,22:26:60.16:1655,60,0	1/1:1,35:36:96.29:2860,96,0	1/1:5,10:15:21.07:625,21,0	0/0:33,0:33:99:0,99,4681	0/0:22,0:22:66.18:0,66,2761	0/0:29,0:29:87.26:0,87,4002	0/0:28,0:28:78.22:0,78,3756	1/1:3,24:27:72.25:2146,72,0	1/1:2,32:34:87.30:2698,87,0	1/1:2,7:9:9.03:279,9,0
chr10	53200958	.	C	CTCTT	2292.80	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=9.084;DP=534;FS=24.218;HRun=0;HaplotypeScore=122.7962;InbreedingCoeff=0.9320;MQ=49.39;MQ0=8;MQRankSum=-7.358;QD=34.22;ReadPosRankSum=-1.863;VQSLOD=1.7766;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:33.50:0,33,714	0/0:10,0:10:21.02:0,21,301	0/0:17,0:10:23.65:0,24,243	0/0:29,0:10:17.17:0,17,210	0/0:27,0:25:35.90:0,36,604	0/0:19,0:18:41.34:0,41,557	0/0:31,0:28:65.91:0,66,861	0/0:28,0:26:62.92:0,63,724	0/0:17,0:17:41.79:0,42,504	1/1:4,0:5:9:123,9,0	1/1:9,2:11:29.94:533,30,0	0/0:26,0:26:72.02:0,72,1030	0/0:31,0:31:81.13:0,81,1124	0/0:24,0:20:27.03:0,27,650	0/0:23,0:23:69.13:0,69,1062	0/0:43,0:43:99:0,114,1736	0/0:21,0:21:7.41:0,7,288	0/0:8,0:8:11.70:0,12,88	1/1:5,0:3:8.98:89,9,0	1/1:3,2:5:14.95:252,15,0	1/1:8,0:8:11.94:144,12,0	0/0:22,0:22:66.12:0,66,1051	0/0:18,0:18:51.03:0,51,673	0/0:28,0:29:63.23:0,63,1168	0/0:22,0:22:53.02:0,53,812	1/1:5,4:10:26.67:528,27,0	1/1:9,2:14:38.83:661,39,0	1/1:0,7:7:6.02:159,6,0
chr10	53200987	.	T	TCTTC	2967.65	PASS	AB=1.000;AC=32;AF=0.571;AN=56;BaseQRankSum=8.943;DP=511;FS=30.772;HRun=0;HaplotypeScore=128.0289;InbreedingCoeff=0.8482;MQ=44.31;MQ0=10;MQRankSum=-5.967;QD=11.03;ReadPosRankSum=-1.132;VQSLOD=1.5209;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:21.01:0,21,269	0/0:7,0:7:20.99:0,21,285	0/0:9,0:4:8.98:0,9,99	0/0:17,0:2:3.01:0,3,47	1/1:24,0:22:35.68:297,36,0	1/1:22,0:21:29.83:284,30,0	1/1:26,0:23:11.19:90,11,0	1/1:28,0:26:14.88:139,15,0	1/1:21,0:21:38.74:345,39,0	0/1:4,0:4:3.45:8,0,3	1/1:8,0:8:11.92:98,12,0	0/0:24,0:24:48.12:0,48,675	0/0:29,0:29:69.11:0,69,949	1/1:25,0:21:25.09:237,25,0	0/0:29,0:29:66.17:0,66,893	0/0:40,0:40:87.12:0,87,1280	1/1:6,18:25:21.07:480,21,0	1/1:10,2:12:29.66:472,30,0	1/1:12,0:9:9.37:62,9,0	1/1:5,0:4:5.97:45,6,0	0/1:4,0:4:0.41:0,0,1	0/0:25,0:25:45.14:0,45,678	0/0:20,0:20:54.06:0,54,752	0/0:27,0:27:34.12:0,34,738	1/1:21,0:21:16.01:141,16,0	1/1:15,0:13:30.94:208,31,0	1/1:12,0:11:28.05:217,28,0	1/1:5,0:5:8.87:56,9,0
chr10	53201002	.	T	TC	342.11	PASS	AB=0.838;AC=8;AF=0.143;AN=56;BaseQRankSum=6.235;DP=523;FS=6.797;HRun=2;HaplotypeScore=120.7267;InbreedingCoeff=-0.1569;MQ=48.96;MQ0=16;MQRankSum=-2.376;QD=3.89;ReadPosRankSum=-0.348;VQSLOD=0.0849;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:42.07:0,42,485	0/0:7,0:7:21.07:0,21,260	0/1:19,0:10:17.89:18,0,120	0/0:25,0:10:20.15:0,20,179	0/0:24,0:22:44.71:0,45,411	0/0:18,0:17:43.94:0,44,441	0/0:19,0:16:32.48:0,32,334	0/0:28,0:26:71.90:0,72,788	0/0:19,0:19:44.19:0,44,438	0/1:4,1:5:43.16:63,0,43	0/1:4,1:5:1.98:2,0,72	0/0:28,0:28:72.18:0,72,854	0/0:27,0:27:78.22:0,78,938	0/0:21,0:17:37.59:0,38,368	0/0:29,0:29:87.26:0,87,1064	0/0:38,0:38:99:0,108,1305	0/0:28,0:28:19.23:0,19,246	0/0:16,0:16:11.70:0,12,275	0/1:9,5:14:99:167,0,113	0/1:5,1:5:6.11:6,0,58	0/1:6,1:7:21.85:22,0,111	0/0:27,0:26:63.09:0,63,714	0/0:22,0:21:60.18:0,60,730	0/0:22,0:22:60.66:0,61,744	0/0:18,0:18:44.12:0,44,452	0/1:11,8:17:99:147,0,159	0/1:11,2:11:45.25:45,0,161	0/0:3,0:3:9.02:0,9,98
chr10	53201014	.	C	CCTT	814.73	PASS	AB=0.971;AC=13;AF=0.232;AN=56;BaseQRankSum=9.601;DP=566;FS=14.845;HRun=0;HaplotypeScore=143.2689;InbreedingCoeff=-0.1405;MQ=50.23;MQ0=15;MQRankSum=-6.360;QD=4.36;ReadPosRankSum=-1.739;VQSLOD=1.3469;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:33.10:0,33,526	0/0:7,0:7:18.06:0,18,317	0/0:30,0:13:29.95:0,30,378	0/0:35,0:12:27.07:0,27,428	0/1:21,2:21:33.53:34,0,452	0/1:21,1:21:99:153,0,506	0/1:18,0:15:8.24:8,0,369	0/0:28,0:26:75.14:0,75,1156	0/1:21,2:23:99:202,0,523	0/1:6,0:6:16.01:16,0,60	0/1:7,0:7:9.83:10,0,41	0/0:30,0:30:78:0,78,1161	0/0:30,0:30:84.21:0,84,1365	0/1:22,2:20:99:154,0,527	0/0:29,0:28:78.21:0,78,1301	0/0:37,0:37:99:0,111,1860	0/0:29,0:29:53.78:0,54,663	0/0:15,0:15:28.53:0,29,572	0/0:15,0:15:22.94:0,23,407	0/0:7,0:6:3.38:0,3,38	0/1:6,0:6:10.96:11,0,41	0/0:28,0:27:75.19:0,75,1225	0/0:24,0:23:60.21:0,60,1039	0/0:22,0:22:60.21:0,60,1037	0/1:22,1:23:93.29:93,0,558	0/1:18,0:16:53.62:54,0,230	0/1:12,0:10:60.11:194,0,60	1/1:5,0:5:5.14:39,5,0
chr10	53201028	.	G	GTC	3092.16	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-3.698;DP=588;FS=4.645;HRun=0;HaplotypeScore=119.9455;InbreedingCoeff=0.8835;MQ=57.39;MQ0=11;MQRankSum=-0.415;QD=23.97;ReadPosRankSum=0.759;VQSLOD=4.0705;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:39.12:0,39,462	0/0:6,0:6:18.05:0,18,213	0/0:32,0:16:9.70:0,10,152	0/0:43,0:17:3.74:0,4,61	1/1:6,16:21:3.65:533,4,0	1/1:9,19:28:45.15:713,45,0	1/1:5,8:12:21.07:331,21,0	0/0:8,0:16:17.10:0,17,96	1/1:5,12:17:30.10:475,30,0	0/0:8,0:8:23.84:0,24,235	0/0:9,0:9:12.81:0,13,195	0/0:26,0:29:68.87:0,69,774	0/0:28,0:29:59.95:0,60,653	1/1:8,17:22:39.13:614,39,0	0/0:31,0:30:69.19:0,69,797	0/0:36,0:37:71.97:0,72,790	0/0:35,0:35:54.14:0,54,626	0/0:17,0:17:30.18:0,30,386	0/0:15,0:15:32.12:0,32,299	0/0:11,0:10:11.82:0,12,142	0/0:5,0:5:6.02:0,6,71	0/0:29,0:30:63.02:0,63,724	0/0:28,0:30:65.39:0,65,732	0/0:23,0:23:39.46:0,39,442	1/1:5,16:21:34.11:606,34,0	0/0:17,0:15:39.06:0,39,432	0/0:12,0:11:18.04:0,18,199	0/0:4,0:4:12.02:0,12,130
chr10	53201125	.	GAC	G	4508.21	PASS	AB=0.924;AC=18;AF=0.321;AN=56;BaseQRankSum=13.031;DP=680;FS=10.443;HRun=0;HaplotypeScore=100.0935;InbreedingCoeff=0.8258;MQ=70.03;MQ0=0;MQRankSum=-2.536;QD=21.27;ReadPosRankSum=2.226;VQSLOD=5.1370;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:57.17:0,57,908	0/0:22,0:22:63.22:0,63,1026	0/0:39,0:35:68.49:0,68,1002	0/0:35,0:29:55.11:0,55,763	0/0:24,2:26:3.64:0,4,1063	0/0:30,1:30:41.08:0,41,1166	0/1:19,2:21:23.22:23,0,662	0/1:27,2:29:1.64:2,0,976	0/0:22,1:23:7.94:0,8,627	1/1:5,9:14:27.04:318,27,0	1/1:4,17:22:44.97:535,45,0	0/0:16,0:16:42.14:0,42,676	0/0:31,0:31:81.25:0,81,1302	0/0:23,1:22:18.89:0,19,768	0/0:30,0:30:84.24:0,84,1302	0/0:37,0:37:99:0,99,1623	0/0:23,1:24:16.98:0,17,776	0/0:11,0:11:30.10:0,30,490	1/1:2,19:21:54.07:610,54,0	1/1:3,13:17:35.94:423,36,0	1/1:2,22:24:60.19:744,60,0	0/0:17,0:17:51.17:0,51,836	0/0:25,1:26:25.99:0,26,912	0/0:24,0:24:63.21:0,63,1020	0/0:29,1:30:28.36:0,28,983	1/1:5,19:24:57.13:688,57,0	1/1:4,29:34:84.10:1017,84,0	1/1:2,4:6:12.04:149,12,0
chr10	53202963	.	T	TAAA	8360.82	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=16.603;DP=544;FS=3.831;HRun=0;HaplotypeScore=91.4340;InbreedingCoeff=0.9875;MQ=70.24;MQ0=0;MQRankSum=-5.009;QD=60.59;ReadPosRankSum=1.781;VQSLOD=6.4448;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:48.16:0,48,895	0/0:6,0:6:18.06:0,18,336	0/0:17,0:17:41.17:0,41,668	0/0:8,0:7:18.06:0,18,323	0/0:19,0:19:57.20:0,57,1055	0/0:19,0:19:57.20:0,57,1053	0/0:15,0:15:45.15:0,45,832	0/0:32,0:32:90.28:0,90,1552	0/0:25,0:25:75.23:0,75,1337	1/1:1,23:24:72.24:1542,72,0	1/1:0,14:15:42.06:854,42,0	0/0:22,0:22:66.21:0,66,1192	0/0:27,0:27:81.28:0,81,1500	0/0:19,0:19:54.17:0,54,971	0/0:30,0:30:87.30:0,87,1606	0/0:21,0:21:63.22:0,63,1175	0/0:15,0:15:45.15:0,45,839	0/0:16,0:16:45.11:0,45,748	1/1:0,11:13:39.12:797,39,0	1/1:1,29:30:90.29:1910,90,0	1/1:2,11:13:37.68:769,38,0	0/0:24,0:24:72.25:0,72,1338	0/0:23,0:23:66.23:0,66,1229	0/0:17,0:17:51.17:0,51,951	0/0:32,0:32:96.33:0,96,1790	1/1:2,14:16:47.37:981,47,0	1/1:1,19:22:60.21:1314,60,0	1/1:0,5:5:9.03:192,9,0
chr10	53205028	.	T	TACACAC	2965.88	PASS	AB=1.000;AC=31;AF=0.620;AN=50;BaseQRankSum=1.499;DP=604;FS=14.115;HRun=0;HaplotypeScore=168.5728;InbreedingCoeff=0.7324;MQ=58.26;MQ0=6;MQRankSum=-4.937;QD=9.21;ReadPosRankSum=-3.873;VQSLOD=0.6654;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:40:44.34:0,44,959	0/0:11,0:11:6.02:0,6,122	./.	./.	0/1:17,0:17:0:0,0,0	1/1:12,0:15:3.01:69,3,0	1/1:23,0:23:9.01:200,9,0	1/1:38,0:37:32.36:383,32,0	1/1:16,0:18:6.02:147,6,0	1/1:24,0:24:24.05:507,24,0	1/1:10,4:18:2.40:93,2,0	0/0:19,0:23:29.32:0,29,554	0/0:20,0:20:23.63:0,24,343	1/1:27,0:27:8.96:213,9,0	0/0:37,0:41:60.20:0,60,1127	0/0:27,0:26:24.18:0,24,817	1/1:11,0:13:5.99:68,6,0	1/1:10,0:10:6.02:126,6,0	./.	1/1:13,4:18:2.16:37,2,0	1/1:13,0:25:3.01:43,3,0	0/0:24,0:24:21.07:0,21,401	0/0:22,0:21:33.08:0,33,565	0/0:19,0:19:22.14:0,22,738	1/1:20,0:20:12.01:225,12,0	1/1:16,2:19:15.01:314,15,0	1/1:13,7:21:20.66:632,21,0	1/1:7,0:7:2.10:90,2,0
chr10	53205339	.	CTTT	C	2058.35	PASS	AB=0.673;AC=16;AF=0.286;AN=56;BaseQRankSum=4.645;DP=504;FS=6.066;HRun=16;HaplotypeScore=89.6884;InbreedingCoeff=0.4514;MQ=62.14;MQ0=6;MQRankSum=-2.393;QD=10.34;ReadPosRankSum=4.816;VQSLOD=0.4864;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,1:44:57.78:0,58,1115	0/0:9,0:11:21.01:0,21,284	0/0:17,0:8:4.83:0,5,59	0/0:7,0:6:7.22:0,7,41	0/1:10,9:19:39.87:270,0,40	0/1:16,4:21:25.03:237,0,25	0/1:3,7:10:3.40:183,0,3	1/1:14,0:25:34.39:214,34,0	1/1:4,5:11:19.66:170,20,0	0/1:5,2:19:35.33:35,0,89	0/0:9,0:19:22.37:0,22,154	0/0:26,0:26:55.58:0,56,687	0/0:17,0:18:37.11:0,37,398	1/1:9,5:14:25.46:201,25,0	0/0:15,0:15:37.18:0,37,487	0/0:13,0:17:27.02:0,27,358	1/1:9,19:29:46.46:501,46,0	1/1:5,17:22:23.44:256,23,0	0/0:7,0:15:19.77:0,20,131	0/0:11,0:17:17.98:0,18,85	0/0:6,1:16:2.25:0,2,104	0/0:10,0:11:21.06:0,21,332	0/0:10,0:10:15.84:0,16,152	0/0:18,0:18:35.78:0,36,440	0/1:10,6:16:24.01:168,0,24	0/0:10,0:18:22.84:0,23,102	0/0:12,0:20:8.15:0,8,65	0/1:6,0:12:6.93:7,0,74
chr10	53205358	.	A	ATT	2613.84	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=2.549;DP=488;FS=2.281;HRun=8;HaplotypeScore=93.0130;InbreedingCoeff=0.8527;MQ=56.58;MQ0=7;MQRankSum=-6.716;QD=19.51;ReadPosRankSum=-1.985;VQSLOD=2.1172;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:44.86:0,45,493	0/0:7,0:7:2.49:0,2,25	0/1:23,0:7:8.85:9,0,40	0/0:9,0:3:8.61:0,9,52	1/1:6,8:15:31.32:405,31,0	1/1:9,13:22:58.71:678,59,0	1/1:4,6:11:23.52:287,24,0	1/1:14,9:24:38.79:498,39,0	1/1:5,5:10:17.52:206,18,0	0/0:21,0:19:33.04:0,33,350	0/0:14,0:14:30.05:0,30,323	0/0:22,0:22:23.06:0,23,264	0/0:16,0:16:26.77:0,27,299	1/1:1,8:11:21.02:255,21,0	0/0:16,0:16:21.03:0,21,233	0/0:16,0:16:33.06:0,33,358	0/0:30,0:29:68.78:0,69,691	0/0:21,0:21:9.28:0,9,258	0/0:20,0:19:35.63:0,36,387	0/0:17,0:15:21:0,21,226	0/0:18,0:17:29.89:0,30,319	0/0:7,0:7:12.01:0,12,133	0/0:12,0:11:11.88:0,12,112	0/0:15,0:15:26.99:0,27,276	1/1:7,10:18:36.92:473,37,0	0/0:15,0:15:29.74:0,30,292	0/0:20,0:20:31.20:0,31,339	0/0:20,0:18:22.23:0,22,240
chr10	53209223	.	TA	T	4402.04	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=13.258;DP=616;FS=8.394;HRun=8;HaplotypeScore=61.8547;InbreedingCoeff=0.9862;MQ=79.70;MQ0=0;MQRankSum=-2.304;QD=25.01;ReadPosRankSum=1.095;VQSLOD=5.5401;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:90.26:0,90,1066	0/0:7,0:7:21.06:0,21,254	0/0:20,1:21:33.43:0,33,385	0/0:10,0:10:14.87:0,15,130	0/0:26,0:28:66:0,66,736	0/0:27,0:28:72.09:0,72,848	0/0:30,0:30:87.25:0,87,1039	0/0:43,0:43:99:0,108,1295	0/0:20,0:20:60.18:0,60,725	1/1:4,27:31:81.11:777,81,0	1/1:3,21:24:60.09:579,60,0	0/0:23,0:23:69.21:0,69,834	0/0:16,0:16:36.10:0,36,423	0/0:13,0:13:27.07:0,27,316	0/0:21,0:21:60.18:0,60,725	0/0:23,0:23:69.20:0,69,824	0/0:30,0:30:84.26:0,84,1014	0/0:8,0:8:24.06:0,24,277	1/1:2,22:24:66.07:625,66,0	1/1:1,21:22:54.07:521,54,0	1/1:2,14:16:42.07:406,42,0	0/0:18,0:18:51.15:0,51,606	0/0:22,0:22:54.17:0,54,652	0/0:27,0:27:78.23:0,78,931	0/0:20,0:20:51.16:0,51,616	1/1:5,22:27:66.07:625,66,0	1/1:0,29:29:81.13:782,81,0	1/1:0,3:3:9.01:87,9,0
chr10	53210256	.	CT	C	4780.74	PASS	AB=0.780;AC=36;AF=0.643;AN=56;BaseQRankSum=8.680;DP=599;FS=0.749;HRun=13;HaplotypeScore=67.0524;InbreedingCoeff=0.5412;MQ=76.11;MQ0=0;MQRankSum=-0.515;QD=10.70;ReadPosRankSum=4.202;VQSLOD=4.5351;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:27,5:34:38.47:38,0,471	0/1:9,2:11:16.81:17,0,159	0/0:19,2:18:14.06:0,14,174	0/1:18,0:14:7.52:8,0,76	1/1:4,17:28:45.45:372,45,0	1/1:5,17:25:30.60:361,31,0	1/1:2,7:10:13.96:93,14,0	1/1:9,22:32:40.51:432,41,0	1/1:3,18:22:20.58:305,21,0	1/1:4,13:18:34.55:235,35,0	1/1:4,11:15:26.79:195,27,0	0/0:25,0:26:40.16:0,40,420	0/0:20,3:23:16.24:0,16,457	1/1:1,13:16:33.90:231,34,0	0/0:13,1:15:11.20:0,11,295	0/0:20,1:21:32.14:0,32,460	1/1:5,21:29:33.60:383,34,0	1/1:4,11:17:36.87:252,37,0	1/1:8,12:22:36.83:252,37,0	1/1:8,12:23:15.64:251,16,0	0/1:7,11:20:31.13:207,0,31	0/1:14,5:19:26.63:27,0,248	0/0:15,1:17:13.98:0,14,280	0/0:28,0:28:66.07:0,66,627	1/1:5,19:25:27.26:293,27,0	1/1:4,23:29:66.67:471,67,0	0/1:9,20:30:1.84:315,0,2	1/1:1,3:4:5.97:44,6,0
chr10	53210659	.	CATATATATATATATATATATATATATATATATATATATATATATATAT	C	1259.72	PASS	AC=12;AF=0.316;AN=38;BaseQRankSum=0.564;DP=229;FS=23.115;HRun=0;HaplotypeScore=228.9079;InbreedingCoeff=0.4900;MQ=66.22;MQ0=5;MQRankSum=0.163;QD=15.36;ReadPosRankSum=2.119;VQSLOD=0.6361;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:3,0:3:9.03:0,9,371	0/0:3,0:3:6.02:0,6,554	./.	0/0:25,0:9:10.38:0,10,304	1/1:12,5:17:3.01:359,3,0	1/1:10,5:15:3.01:359,3,0	1/1:8,0:8:3.01:92,3,0	0/0:25,0:25:48.03:0,48,800	1/1:12,4:16:3.01:359,3,0	./.	./.	0/0:4,0:4:3.01:0,3,191	./.	1/1:13,0:13:3.01:93,3,0	0/0:3,0:3:6.02:0,6,249	0/0:3,0:3:6.02:0,6,338	0/0:13,0:14:21.07:0,21,2158	0/0:14,0:13:27.07:0,27,1837	0/0:5,0:4:2.37:0,2,8	./.	./.	0/0:7,0:7:3.01:0,3,164	./.	./.	1/1:13,0:13:3.01:118,3,0	./.	0/0:7,0:7:2.99:0,3,24	0/0:3,0:3:8.24:0,8,181
chr10	53210673	.	T	TC	32.86	PASS	AC=6;AF=0.167;AN=36;BaseQRankSum=2.202;DP=101;FS=14.307;HRun=0;HaplotypeScore=34.4589;InbreedingCoeff=0.4235;MQ=63.20;MQ0=5;MQRankSum=0.828;QD=5.48;ReadPosRankSum=-2.296;VQSLOD=1.2303;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:3,0:3:9.03:0,9,124	0/0:2,0:2:6.02:0,6,82	./.	0/0:21,0:5:8.83:0,9,79	0/0:5,0:5:2.04:0,2,6	0/0:5,0:5:2.22:0,2,7	1/1:0,2:2:3.01:44,3,0	0/0:14,0:14:42.08:0,42,495	0/0:4,0:4:2.22:0,2,7	./.	./.	0/0:1,0:1:3.01:0,3,41	./.	1/1:1,0:1:3.01:44,3,0	0/0:2,0:2:6.02:0,6,83	0/0:3,0:3:6.02:0,6,82	0/0:15,0:15:23.68:0,24,327	0/0:10,0:9:24.01:0,24,305	0/0:2,0:1:0.89:0,1,2	./.	./.	0/0:1,0:1:3.01:0,3,41	./.	./.	1/1:0,3:3:3.01:43,3,0	./.	./.	0/0:5,0:5:8.31:0,8,89
chr10	53211002	.	A	AGAAG	4582.36	PASS	AB=0.928;AC=30;AF=0.577;AN=52;BaseQRankSum=-1.683;DP=539;FS=0.000;HRun=0;HaplotypeScore=98.5918;InbreedingCoeff=0.4694;MQ=62.34;MQ0=2;MQRankSum=-3.250;QD=12.52;ReadPosRankSum=-2.718;VQSLOD=3.6210;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:24:23.96:252,24,0	1/1:5,3:10:9.03:205,9,0	./.	./.	0/1:13,0:13:7.02:76,0,7	1/1:25,0:24:26.63:178,27,0	1/1:26,0:25:17.99:258,18,0	0/0:16,0:14:0:0,0,0	0/1:21,0:21:57.68:209,0,58	0/0:6,0:17:27:0,27,236	0/0:5,0:12:12.01:0,12,112	1/1:10,18:29:30.10:703,30,0	1/1:12,6:19:12.04:277,12,0	0/1:21,0:21:97.68:109,0,98	1/1:11,12:23:12.04:281,12,0	1/1:4,7:12:12.04:282,12,0	1/1:23,0:23:11.31:80,11,0	1/1:31,0:32:18:234,18,0	0/0:12,0:11:15.04:0,15,192	0/0:10,0:10:20.94:0,21,252	0/0:27,0:27:39.10:0,39,556	0/1:3,9:13:17.41:422,0,17	1/1:4,7:13:18.06:422,18,0	1/1:15,14:30:24.04:512,24,0	0/1:20,0:20:45.24:45,0,96	0/0:6,0:17:27:0,27,239	0/0:32,0:32:57.07:0,57,726	0/1:4,0:12:19.28:38,0,19
chr10	53211044	.	A	AAGGGAGGG	3210.03	PASS	AB=0.900;AC=14;AF=0.250;AN=56;BaseQRankSum=-3.656;DP=544;FS=4.182;HRun=0;HaplotypeScore=139.9590;InbreedingCoeff=0.6065;MQ=60.29;MQ0=6;MQRankSum=-2.848;QD=17.17;ReadPosRankSum=-0.162;VQSLOD=2.3085;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:16,0:16:75.43:75,0,245	0/0:13,0:13:27.45:0,27,355	0/0:13,0:10:24.08:0,24,428	0/0:11,0:9:14.23:0,14,325	1/1:0,10:13:26.94:474,27,0	1/1:21,0:20:24.08:386,24,0	1/1:20,0:19:48.04:755,48,0	0/0:22,0:19:39.54:0,40,575	1/1:8,19:28:24:915,24,0	0/0:23,0:23:57.29:0,57,1046	0/0:12,0:12:27.09:0,27,515	0/0:26,0:26:27.57:0,28,400	0/0:15,0:15:31.47:0,31,427	1/1:9,8:17:12.04:495,12,0	0/0:18,0:18:26.05:0,26,313	0/0:16,0:16:32.10:0,32,455	0/1:23,0:23:24.22:24,0,743	0/1:28,0:28:25.63:26,0,695	0/0:17,0:15:33.05:0,33,578	0/0:17,0:17:45.14:0,45,878	0/0:21,0:21:51.17:0,51,1113	0/0:22,0:22:20.86:0,21,553	0/0:18,0:18:37.84:0,38,479	0/0:24,0:24:27.38:0,27,420	0/1:7,12:21:45.92:245,0,46	0/0:20,0:19:39.13:0,39,750	0/0:35,0:35:93.32:0,93,1951	0/0:14,0:14:21.02:0,21,287
chr10	53211368	.	TGATA	T	4071.47	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=5.812;DP=509;FS=16.311;HRun=0;HaplotypeScore=87.2179;InbreedingCoeff=0.8931;MQ=72.19;MQ0=1;MQRankSum=-0.204;QD=25.13;ReadPosRankSum=1.143;VQSLOD=1.8310;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:53.90:0,54,1161	0/0:11,0:11:24.07:0,24,544	0/0:21,0:20:33.08:0,33,585	0/0:15,0:11:8.65:0,9,221	1/1:4,9:13:24.08:401,24,0	1/1:7,14:21:30.10:502,30,0	1/1:8,8:16:21:304,21,0	1/1:40,0:40:72.12:1225,72,0	1/1:5,15:20:30.10:486,30,0	0/0:20,0:20:51.17:0,51,1136	0/0:12,0:12:30.10:0,30,713	0/0:17,0:17:33.11:0,33,764	0/0:31,0:31:75.24:0,75,1802	1/1:2,16:18:45.15:752,45,0	0/0:23,0:23:54.19:0,54,1289	0/0:16,0:16:36.12:0,36,872	0/0:17,0:17:24.08:0,24,334	0/1:18,0:18:31.45:31,0,290	0/0:12,0:12:18.03:0,18,324	0/0:19,0:19:54.16:0,54,1233	0/0:18,0:18:36.12:0,36,857	0/0:13,0:13:30.10:0,30,717	0/0:7,0:7:18.06:0,18,443	0/0:13,0:13:33.11:0,33,761	1/1:6,10:16:24.01:369,24,0	0/0:28,0:28:72.25:0,72,1720	0/0:18,0:17:39.08:0,39,795	0/0:12,0:12:30.09:0,30,691
chr10	53211383	.	T	TAGAG	3210.18	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=-7.628;DP=514;FS=32.066;HRun=0;HaplotypeScore=90.3570;InbreedingCoeff=0.5233;MQ=70.98;MQ0=2;MQRankSum=0.116;QD=26.10;ReadPosRankSum=-2.848;VQSLOD=1.2183;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:54.53:0,55,914	0/0:9,0:9:24.07:0,24,422	0/0:29,0:22:22.65:0,23,579	0/0:21,0:15:15.37:0,15,228	0/0:14,0:14:10.69:0,11,260	0/1:17,0:17:20.61:21,0,159	0/0:13,0:13:4.93:0,5,195	1/1:3,34:39:99:1797,108,0	0/1:19,0:19:92.44:92,0,172	0/0:24,0:24:49.20:0,49,1048	0/0:17,0:17:45.09:0,45,684	0/0:15,0:15:42.08:0,42,620	0/0:28,0:28:81.23:0,81,1427	0/0:18,0:18:0.27:0,0,319	0/0:24,0:24:66.17:0,66,1120	0/0:12,0:12:36.12:0,36,681	1/1:2,14:16:24.08:646,24,0	1/1:2,17:20:16.19:791,16,0	0/0:15,0:15:35.93:0,36,413	0/0:22,0:22:66.13:0,66,1055	0/0:15,0:15:42.10:0,42,689	0/0:15,0:15:39.09:0,39,625	0/0:9,0:9:27.05:0,27,415	0/0:14,0:14:39.10:0,39,653	0/1:12,0:12:18.94:19,0,116	0/0:26,0:26:78.24:0,78,1377	0/0:14,0:14:39.08:0,39,639	0/0:11,0:11:33.08:0,33,558
chr10	53212820	.	AAAG	A	902.08	PASS	AB=0.775;AC=11;AF=0.196;AN=56;BaseQRankSum=4.263;DP=533;FS=14.442;HRun=0;HaplotypeScore=74.0181;InbreedingCoeff=0.5455;MQ=50.18;MQ0=39;MQRankSum=-0.806;QD=7.98;ReadPosRankSum=-3.205;VQSLOD=0.5641;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:72.14:0,72,1304	0/0:11,0:11:30.10:0,30,644	0/0:32,0:12:28.81:0,29,491	0/0:62,0:19:30.63:0,31,617	0/1:8,7:9:15.86:18,0,16	0/1:8,10:15:2.28:45,0,2	0/0:2,11:13:2.96:0,3,7	1/1:11,19:26:50.24:787,50,0	1/1:3,7:7:3.01:51,3,0	0/0:25,0:25:63.20:0,63,1317	0/0:13,0:12:33.11:0,33,708	0/0:19,0:19:40.36:0,40,775	0/0:12,0:11:28.31:0,28,549	1/1:1,7:7:3.01:51,3,0	0/0:19,0:18:49.40:0,49,998	0/0:15,0:13:37.37:0,37,783	1/1:6,13:16:3.48:53,3,0	0/1:13,0:7:25.83:44,0,26	0/0:13,0:13:31.34:0,31,605	0/0:21,0:19:49.40:0,49,958	0/0:10,0:10:22.75:0,23,385	0/0:21,0:21:60.67:0,61,1260	0/0:15,0:15:40.02:0,40,801	0/0:25,0:23:57.07:0,57,1056	0/0:3,7:8:1.25:0,1,3	0/0:23,0:22:60.21:0,60,1334	0/0:19,0:19:54.17:0,54,1136	0/0:14,0:12:33.10:0,33,672
chr10	53212823	.	GGAGAGAGA	G	116.34	PASS	AB=0.944;AC=10;AF=0.313;AN=32;BaseQRankSum=1.157;DP=549;FS=9.556;HRun=0;HaplotypeScore=112.4392;InbreedingCoeff=0.3079;MQ=48.84;MQ0=39;MQRankSum=0.694;QD=0.77;ReadPosRankSum=-0.231;VQSLOD=1.7378;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	0/1:58,0:17:0:0,0,0	./.	0/0:15,0:15:3.01:0,3,38	./.	0/0:32,0:31:4.44:0,4,14	./.	1/1:25,0:25:2.92:17,3,0	./.	1/1:14,4:18:3.01:68,3,0	0/0:12,0:11:3.46:0,3,25	./.	./.	./.	0/0:19,0:18:6.38:0,6,56	0/0:12,0:10:9.01:0,9,145	1/1:11,0:12:2.80:13,3,0	./.	0/0:13,0:13:0.47:0,0,1	0/0:21,0:21:6.02:0,6,139	1/1:14,0:15:3.01:50,3,0	0/1:21,3:22:14.21:67,0,14	./.	0/0:24,0:23:0:0,0,0	0/0:22,0:22:0:0,0,0	0/0:13,0:11:3.01:0,3,75
chr10	53214875	.	T	TCACA	2163.72	PASS	AB=0.917;AC=29;AF=0.537;AN=54;BaseQRankSum=5.917;DP=565;FS=3.446;HRun=0;HaplotypeScore=129.2751;InbreedingCoeff=0.7057;MQ=55.94;MQ0=10;MQRankSum=-5.430;QD=6.76;ReadPosRankSum=-4.735;VQSLOD=1.1491;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:41.15:0,41,547	0/0:5,0:5:9.03:0,9,141	0/1:24,0:11:0:0,0,0	./.	0/1:20,9:28:34.48:184,0,34	1/1:19,0:21:17.98:206,18,0	1/1:19,0:19:15.01:162,15,0	1/1:17,0:17:14.02:120,14,0	1/1:9,12:22:19.07:266,19,0	1/1:20,0:19:10.30:147,10,0	1/1:28,0:26:2.99:24,3,0	0/0:22,0:22:56.35:0,56,789	0/0:16,0:17:41.92:0,42,614	1/1:8,3:13:2.61:59,3,0	0/0:29,0:29:45.49:0,45,593	0/0:21,0:21:46.69:0,47,687	0/0:20,0:20:11.87:0,12,92	0/0:18,0:17:3:0,3,26	0/1:14,0:14:1.85:32,0,2	1/1:15,0:15:11.19:73,11,0	1/1:16,0:16:5.98:46,6,0	0/0:23,0:23:42.08:0,42,587	0/0:17,0:17:19.05:0,19,367	0/0:21,0:21:38.58:0,39,614	1/1:14,4:19:22.88:391,23,0	1/1:24,0:23:28.64:275,29,0	1/1:29,0:30:27.21:363,27,0	1/1:8,0:7:2.25:12,2,0
chr10	53214896	.	CACACACAT	C	1284.30	PASS	AB=0.972;AC=20;AF=0.357;AN=56;BaseQRankSum=0.509;DP=619;FS=4.993;HRun=0;HaplotypeScore=150.1795;InbreedingCoeff=-0.2240;MQ=48.27;MQ0=19;MQRankSum=-1.433;QD=3.36;ReadPosRankSum=-8.450;VQSLOD=0.0794;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:27.56:0,28,1353	0/0:7,0:7:18.01:0,18,443	0/1:22,0:5:4.87:5,0,26	0/0:29,0:8:5.10:0,5,117	0/1:28,0:26:50.18:50,0,278	0/1:23,0:23:67.81:68,0,199	0/1:17,0:17:80.69:98,0,81	0/1:26,0:25:99:301,0,209	0/1:20,0:20:1.10:1,0,437	0/1:24,0:23:99:117,0,738	0/1:28,0:26:73.19:73,0,151	0/0:23,0:23:65.61:0,66,1934	0/0:22,0:22:34.04:0,34,1637	1/1:13,0:13:1.86:22,2,0	0/0:27,0:27:59.87:0,60,1569	0/0:22,0:22:52.22:0,52,2225	0/1:5,21:25:0.46:242,0,0	1/1:4,21:24:5.99:103,6,0	0/1:14,0:13:54.35:54,0,208	0/1:17,0:17:52.21:52,0,67	0/1:21,0:19:88.60:89,0,129	0/0:24,0:24:63.06:0,63,1597	0/0:24,0:24:43.02:0,43,1144	0/0:21,0:21:29.74:0,30,1808	0/1:21,0:21:4.85:5,0,323	0/1:26,0:25:99:103,0,1123	0/1:26,0:26:26:26,0,911	0/1:5,0:4:32.92:33,0,94
chr10	53214900	.	C	CAT	760.62	PASS	AB=0.894;AC=13;AF=0.232;AN=56;BaseQRankSum=6.880;DP=619;FS=5.823;HRun=0;HaplotypeScore=111.1973;InbreedingCoeff=-0.1061;MQ=48.54;MQ0=17;MQRankSum=1.421;QD=2.86;ReadPosRankSum=-0.310;VQSLOD=2.0523;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:49.64:0,50,703	0/0:7,0:7:21.01:0,21,236	0/0:22,0:6:9.44:0,9,79	0/0:29,0:8:11.17:0,11,120	0/1:30,0:28:45.40:70,0,45	0/1:14,7:23:31.21:31,0,71	0/1:9,5:14:3.44:3,0,118	0/0:26,0:25:74.26:0,74,550	1/1:20,1:21:2.97:146,3,0	0/1:23,0:22:99:106,0,233	0/1:28,0:26:28.78:76,0,29	0/0:22,0:22:54.93:0,55,877	0/0:23,0:23:48.90:0,49,686	0/1:11,0:11:2.01:20,0,2	0/0:27,0:27:69.04:0,69,859	0/0:22,0:22:66.13:0,66,856	0/0:26,0:25:14.33:0,14,77	0/0:25,0:24:8.73:0,9,51	0/0:14,0:13:6.21:0,6,142	0/1:10,10:20:35.92:36,0,63	0/1:21,0:19:59.86:60,0,67	0/0:24,0:24:63.10:0,63,789	0/0:24,0:24:51.05:0,51,592	0/0:23,0:23:63.06:0,63,785	0/1:13,8:22:20.66:140,0,21	0/1:28,0:27:76.33:76,0,273	0/1:25,0:25:66.41:145,0,66	0/0:5,0:4:8.89:0,9,61
chr10	53214904	.	T	TACAC	3016.26	PASS	AB=1.000;AC=29;AF=0.537;AN=54;BaseQRankSum=1.941;DP=627;FS=6.068;HRun=0;HaplotypeScore=124.3979;InbreedingCoeff=0.8691;MQ=49.02;MQ0=18;MQRankSum=-2.970;QD=9.03;ReadPosRankSum=-3.804;VQSLOD=1.3836;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:29.35:0,29,561	0/0:6,0:6:14.40:0,14,173	0/0:22,0:6:13.95:0,14,108	0/0:32,0:10:17.81:0,18,210	1/1:25,1:26:18.20:240,18,0	1/1:23,0:23:3.01:73,3,0	1/1:14,0:14:9.93:111,10,0	1/1:28,0:27:7.48:38,7,0	1/1:16,3:20:26.12:373,26,0	1/1:22,0:21:26.66:395,27,0	1/1:28,0:27:17.66:241,18,0	0/0:22,0:22:41.35:0,41,636	0/0:22,0:23:44.78:0,45,602	1/1:12,0:12:11.27:107,11,0	0/0:24,0:24:44.93:0,45,643	0/0:24,0:24:50.82:0,51,755	0/0:26,0:25:11.78:0,12,83	0/1:25,0:24:2.13:2,0,21	1/1:14,0:14:12.44:109,12,0	1/1:21,0:21:5.80:86,6,0	1/1:22,0:20:15.05:195,15,0	0/0:26,0:26:54.07:0,54,747	0/0:24,0:24:42.10:0,42,589	0/0:23,0:23:56.64:0,57,808	1/1:15,4:21:17.09:283,17,0	1/1:31,0:30:37.03:467,37,0	1/1:24,0:24:39.91:509,40,0	./.
chr10	53214925	.	A	ACACA	4213.37	PASS	AB=1.000;AC=31;AF=0.554;AN=56;BaseQRankSum=2.426;DP=598;FS=14.924;HRun=0;HaplotypeScore=135.4459;InbreedingCoeff=0.8559;MQ=55.25;MQ0=11;MQRankSum=-3.398;QD=12.73;ReadPosRankSum=-1.702;VQSLOD=3.5382;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:29.35:0,29,561	0/0:7,0:7:14.40:0,14,173	0/0:22,0:10:13.91:0,14,108	0/0:32,0:13:17.81:0,18,210	1/1:24,0:24:18.03:240,18,0	1/1:24,0:24:3.01:73,3,0	1/1:13,0:13:8.68:108,9,0	1/1:24,0:23:7.48:38,7,0	1/1:14,0:14:26.12:373,26,0	1/1:15,9:24:48.10:731,48,0	1/1:28,0:26:17.60:241,18,0	0/0:19,0:19:41.35:0,41,636	0/0:23,0:23:44.78:0,45,602	1/1:10,0:10:14.68:175,15,0	0/0:19,0:19:44.92:0,45,643	0/0:26,0:26:50.83:0,51,755	0/0:26,0:26:11.77:0,12,83	0/1:25,0:24:2.13:2,0,21	1/1:13,0:13:14.98:161,15,0	1/1:25,0:25:4.02:83,4,0	1/1:15,0:14:15.05:195,15,0	0/0:23,0:23:54.07:0,54,747	0/0:20,0:20:42.10:0,42,589	0/0:24,0:24:56.64:0,57,808	1/1:23,0:23:16.99:282,17,0	1/1:29,0:28:53.79:718,54,0	1/1:31,0:31:37.02:707,37,0	1/1:8,0:8:5.91:86,6,0
chr10	53215474	.	T	TA	17895.40	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-15.915;DP=601;FS=0.660;HRun=0;HaplotypeScore=51.6370;InbreedingCoeff=0.9984;MQ=86.84;MQ0=0;MQRankSum=-3.317;QD=45.08;ReadPosRankSum=0.623;VQSLOD=4.7840;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:75.25:0,75,1047	0/0:6,0:6:18.05:0,18,235	0/0:22,0:22:66.21:0,66,897	0/0:18,0:18:51.12:0,51,659	1/1:1,25:26:63.21:1007,63,0	1/1:0,19:19:57.19:911,57,0	1/1:1,15:16:45.15:720,45,0	1/1:2,24:26:75.23:1146,75,0	1/1:0,18:18:48.16:767,48,0	1/1:0,29:29:87.30:1390,87,0	1/1:0,20:20:57.19:911,57,0	0/0:18,0:18:54.17:0,54,738	0/0:16,0:16:48.15:0,48,654	1/1:1,27:28:78.27:1237,78,0	0/0:22,0:22:60.19:0,60,822	0/0:15,0:15:45.15:0,45,629	1/1:0,28:28:81.28:1295,81,0	1/1:0,34:34:96.33:1534,96,0	1/1:0,23:23:69.22:1080,69,0	1/1:0,32:32:90.31:1439,90,0	1/1:0,13:13:33.11:528,33,0	0/0:21,0:21:63.19:0,63,848	0/0:30,0:30:90.30:0,90,1255	0/0:10,0:10:30.08:0,30,402	1/1:0,26:26:75.26:1199,75,0	1/1:0,21:21:63.21:1007,63,0	1/1:0,30:30:84.29:1343,84,0	1/1:0,8:8:24.08:384,24,0
chr10	53216297	.	GA	G	2755.15	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=7.316;DP=649;FS=1.771;HRun=8;HaplotypeScore=96.6923;InbreedingCoeff=0.9935;MQ=77.16;MQ0=0;MQRankSum=-4.361;QD=23.35;ReadPosRankSum=0.687;VQSLOD=3.8579;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,144,1700	0/0:4,0:4:12.04:0,12,145	0/0:26,0:25:29.22:0,29,540	0/0:35,0:33:57.03:0,57,663	1/1:5,29:34:69.10:666,69,0	1/1:1,13:14:42.05:399,42,0	1/1:2,15:17:45.07:435,45,0	0/0:27,0:27:66.18:0,66,776	1/1:0,18:18:54.09:521,54,0	0/0:33,0:33:87.26:0,87,1042	0/0:20,0:20:54.17:0,54,651	0/0:21,0:22:51.01:0,51,584	0/0:24,0:24:69.20:0,69,823	1/1:3,20:23:60.09:579,60,0	0/0:29,1:30:52.26:0,52,901	0/0:21,0:21:60.18:0,60,725	0/0:36,0:36:93.29:0,93,1122	0/0:21,1:22:36.98:0,37,707	0/0:16,0:16:42.12:0,42,496	0/0:13,0:13:36.10:0,36,424	0/0:30,0:30:75.22:0,75,893	0/0:15,0:15:45.13:0,45,526	0/0:20,0:20:60.16:0,60,711	0/0:27,0:27:78.22:0,78,929	1/1:1,11:12:36.05:343,36,0	0/0:24,0:24:51.15:0,51,605	0/0:27,0:27:72.22:0,72,870	0/0:10,0:10:30.09:0,30,362
chr10	53216341	.	A	AG	12947.97	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-10.418;DP=640;FS=4.263;HRun=5;HaplotypeScore=70.6035;InbreedingCoeff=0.9954;MQ=84.07;MQ0=0;MQRankSum=-4.566;QD=32.45;ReadPosRankSum=1.013;VQSLOD=5.5635;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,105,1128	0/0:4,0:4:12.03:0,12,129	0/0:29,0:29:75.13:0,75,781	0/0:21,0:20:41.21:0,41,389	1/1:6,24:30:57.19:747,57,0	1/1:0,19:19:48.16:631,48,0	1/1:4,14:18:39.11:497,39,0	1/1:3,24:27:66.18:833,66,0	1/1:1,20:21:57.19:749,57,0	1/1:3,30:33:90.20:1128,90,0	1/1:3,18:21:51.17:670,51,0	0/0:16,0:16:42.08:0,42,440	0/0:23,0:23:54.10:0,54,569	1/1:2,17:19:54.16:695,54,0	0/0:25,0:25:69.13:0,69,717	0/0:19,0:19:57.12:0,57,602	1/1:2,19:21:51.17:671,51,0	1/1:2,10:12:30.10:395,30,0	1/1:2,21:23:63.20:828,63,0	1/1:0,19:19:54.18:710,54,0	1/1:2,39:41:99:1382,105,0	0/0:18,0:18:45.10:0,45,475	0/0:22,0:22:57.14:0,57,612	0/0:22,0:22:57.14:0,57,613	1/1:1,12:13:30.10:393,30,0	1/1:8,24:32:75.20:941,75,0	1/1:3,27:30:75.24:987,75,0	1/1:1,19:20:36.52:690,37,0
chr10	53217897	.	AACACACACAC	A	774.97	PASS	AC=10;AF=0.200;AN=50;BaseQRankSum=3.580;DP=517;FS=4.373;HRun=0;HaplotypeScore=206.1290;InbreedingCoeff=0.7182;MQ=51.05;MQ0=28;MQRankSum=-3.815;QD=10.20;ReadPosRankSum=2.337;VQSLOD=2.4355;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:28:21.07:0,21,630	0/0:6,0:6:15.05:0,15,401	./.	./.	0/0:15,0:16:15.05:0,15,536	0/0:17,0:17:27.09:0,27,1010	0/0:20,0:19:14.08:0,14,512	0/0:17,0:17:6.02:0,6,95	0/0:15,0:13:6.02:0,6,265	1/1:15,0:16:3.48:71,3,0	0/0:11,0:9:0:0,0,0	0/0:20,0:20:27.09:0,27,850	0/0:8,0:7:6.02:0,6,225	0/0:15,0:15:18.06:0,18,595	0/0:24,0:22:24.08:0,24,969	0/0:15,0:16:18.06:0,18,626	0/0:32,0:30:36.12:0,36,1442	0/0:6,0:8:21.07:0,21,591	0/0:12,0:11:2.37:0,2,8	1/1:14,2:15:5.97:175,6,0	1/1:21,0:19:3.01:40,3,0	0/0:27,0:27:12.04:0,12,535	0/0:25,0:25:33.11:0,33,1255	0/0:27,0:27:35.99:0,36,1387	0/0:21,0:22:21.04:0,21,934	./.	1/1:10,3:12:9.03:264,9,0	1/1:5,3:8:15.05:365,15,0
chr10	53218107	.	TCACACACACACA	T	3077.69	PASS	AB=0.604;AC=19;AF=0.352;AN=54;BaseQRankSum=5.978;DP=490;FS=4.599;HRun=0;HaplotypeScore=154.1905;InbreedingCoeff=0.6406;MQ=61.00;MQ0=11;MQRankSum=-1.834;QD=15.70;ReadPosRankSum=0.589;VQSLOD=2.2907;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:42.95:0,43,1435	0/0:10,0:9:15.02:0,15,518	0/0:30,0:8:2.96:0,3,19	./.	0/0:17,0:18:20.64:0,21,149	0/1:14,0:29:0.17:0,0,38	0/0:14,0:13:4.26:0,4,66	0/0:20,0:19:32.08:0,32,373	0/1:4,0:16:2.09:2,0,47	1/1:5,11:15:24.72:447,25,0	1/1:4,16:20:12.04:274,12,0	0/0:21,0:22:42.10:0,42,1733	0/0:12,0:12:29.91:0,30,866	0/0:2,0:10:6.87:0,7,127	0/0:12,0:12:33.09:0,33,1552	0/0:8,0:10:24.05:0,24,889	0/1:6,14:19:8.93:337,0,9	1/1:11,2:12:0.25:345,0,0	1/1:6,5:11:1.10:287,1,0	1/1:5,9:14:15:291,15,0	1/1:19,0:19:20.48:194,20,0	0/0:13,0:13:15.05:0,15,542	0/0:19,0:21:24.07:0,24,852	0/0:30,0:32:57.15:0,57,2076	0/0:6,0:12:2.94:0,3,86	1/1:7,9:15:18.03:451,18,0	1/1:6,15:21:18.32:628,18,0	0/0:4,0:4:9.03:0,9,245
chr10	53219568	.	ATGTC	A	4959.09	PASS	AB=0.622;AC=15;AF=0.268;AN=56;BaseQRankSum=6.703;DP=694;FS=3.019;HRun=0;HaplotypeScore=129.8826;InbreedingCoeff=0.8960;MQ=69.41;MQ0=5;MQRankSum=-1.885;QD=26.24;ReadPosRankSum=2.801;VQSLOD=4.6041;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:78.27:0,78,1784	0/0:6,0:6:9.03:0,9,189	0/0:25,0:20:30.05:0,30,529	0/0:42,0:36:56.37:0,56,1065	0/0:27,0:27:36.11:0,36,750	0/0:17,0:17:36.12:0,36,852	0/0:23,0:23:54.18:0,54,1254	0/0:44,0:43:27.46:0,27,1373	0/0:25,0:25:51.17:0,51,1189	1/1:20,15:34:66.21:1020,66,0	1/1:8,8:16:24.08:397,24,0	0/0:28,0:28:69.24:0,69,1500	0/0:25,0:25:57.19:0,57,1211	0/0:27,0:27:54.18:0,54,1250	0/0:32,0:32:93.32:0,93,2033	0/0:24,0:24:51.16:0,51,1046	0/0:18,0:18:18.53:0,19,387	0/0:15,0:15:30.08:0,30,622	1/1:14,7:21:27.09:442,27,0	1/1:18,14:30:57.17:906,57,0	1/1:9,20:26:15.05:249,15,0	0/0:16,0:16:24.08:0,24,517	0/0:19,0:19:42.14:0,42,865	0/0:30,0:30:69.22:0,69,1546	0/0:29,0:29:57.18:0,57,1279	0/1:9,14:22:16.33:807,0,16	1/1:4,9:13:30.10:494,30,0	1/1:5,15:18:39.13:644,39,0
chr10	53219628	.	TACAC	T	4397.03	PASS	AB=0.667;AC=27;AF=0.482;AN=56;BaseQRankSum=9.727;DP=731;FS=3.204;HRun=0;HaplotypeScore=182.5439;InbreedingCoeff=0.6171;MQ=57.35;MQ0=16;MQRankSum=-3.294;QD=11.79;ReadPosRankSum=1.539;VQSLOD=4.7015;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:85.80:0,86,1891	0/1:8,0:10:15.43:15,0,427	0/0:32,0:8:3.01:0,3,48	0/0:33,0:12:8.48:0,8,136	1/1:6,24:32:23.75:392,24,0	1/1:4,14:18:27.09:442,27,0	1/1:10,17:27:26.87:442,27,0	0/1:18,0:42:22.64:330,0,23	1/1:9,25:34:45.14:714,45,0	1/1:10,0:23:33.51:308,34,0	0/1:4,0:21:0.25:0,0,0	0/0:35,0:35:57.14:0,57,1290	0/0:30,0:35:73.69:0,74,1684	1/1:6,16:26:29.75:466,30,0	0/0:35,0:36:65.91:0,66,1342	0/0:33,0:33:90.03:0,90,2039	0/0:12,0:11:23.85:0,24,321	0/0:8,0:8:11.92:0,12,138	0/1:7,0:11:25.86:69,0,26	1/1:6,0:25:6.01:56,6,0	1/1:9,0:17:0.20:1,0,0	0/0:18,0:20:26.83:0,27,598	0/0:18,0:21:26.83:0,27,569	0/0:42,1:43:86.47:0,86,1901	1/1:7,17:24:33.11:540,33,0	0/1:9,0:24:4.83:316,0,5	1/1:8,0:25:26.55:250,27,0	1/1:9,0:8:6.01:56,6,0
chr10	53220730	.	TTCTCTCTCTCTCTCTCTC	T	471.89	PASS	AC=10;AF=0.208;AN=48;BaseQRankSum=2.549;DP=502;FS=3.296;HRun=0;HaplotypeScore=184.9764;InbreedingCoeff=0.4714;MQ=61.97;MQ0=17;MQRankSum=-0.829;QD=6.55;ReadPosRankSum=1.857;VQSLOD=2.8908;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:18.06:0,18,1300	./.	./.	0/0:52,0:28:1.36:0,1,3	1/1:18,0:18:3.01:40,3,0	1/1:9,1:10:9.38:166,9,0	0/0:19,0:19:4.94:0,5,355	0/0:28,0:28:8.95:0,9,90	1/1:7,5:12:3.01:145,3,0	0/0:20,0:19:14.55:0,15,189	0/0:13,0:14:6.01:0,6,82	0/0:13,0:12:6.02:0,6,336	0/0:16,0:15:12.03:0,12,316	1/1:15,5:19:6.02:185,6,0	0/0:14,0:13:6.49:0,6,250	0/0:11,0:10:3.01:0,3,199	./.	./.	0/0:17,0:15:6.02:0,6,189	0/0:10,0:10:1.36:0,1,2	0/0:21,0:21:6.02:0,6,252	0/0:14,0:14:3.01:0,3,139	0/0:17,0:15:6.02:0,6,286	0/0:14,0:21:3.01:0,3,78	1/1:12,0:11:3.01:63,3,0	0/0:19,0:18:14.73:0,15,356	0/0:12,0:11:6.02:0,6,228	0/0:10,0:9:2.22:0,2,8
chr10	53221496	.	GA	G	994.27	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.716;DP=732;DS;FS=2.363;HRun=3;HaplotypeScore=72.7329;InbreedingCoeff=0.9967;MQ=45.73;MQ0=106;MQRankSum=1.545;QD=32.07;ReadPosRankSum=1.377;VQSLOD=4.0365;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:33:84.28:0,84,1184	0/0:21,0:19:48:0,48,690	0/0:20,0:9:27.09:0,27,386	0/0:30,0:21:60.19:0,60,816	0/0:28,0:24:54.14:0,54,753	0/0:35,0:28:78.26:0,78,1121	0/0:20,0:14:42.14:0,42,604	0/0:24,0:15:45.12:0,45,621	0/0:30,0:27:72.24:0,72,1031	0/0:28,0:22:66.21:0,66,932	0/0:21,0:16:36.09:0,36,495	0/0:18,0:15:42.10:0,42,581	0/0:33,0:29:81.23:0,81,1133	0/0:35,0:32:96.20:0,96,1307	0/0:25,0:20:57.15:0,57,796	0/0:25,0:21:54.10:0,54,730	1/1:0,24:24:69.22:855,69,0	1/1:0,7:7:21.07:260,21,0	0/0:24,0:14:42.14:0,42,600	0/0:38,0:34:93.31:0,93,1337	0/0:27,0:25:66.22:0,66,947	0/0:28,0:23:69.20:0,69,970	0/0:32,0:26:69.23:0,69,987	0/0:19,0:15:42.14:0,42,604	0/0:21,0:16:45.15:0,45,647	0/0:35,0:29:87.29:0,87,1251	0/0:35,0:29:84.28:0,84,1207	0/0:14,0:13:27.09:0,27,389
chr10	53222256	.	G	GC	2356.61	PASS	AC=32;AF=0.593;AN=54;BaseQRankSum=-2.069;DP=279;FS=6.310;HRun=2;HaplotypeScore=32.4038;InbreedingCoeff=0.7913;MQ=44.46;MQ0=9;MQRankSum=-6.032;QD=17.20;ReadPosRankSum=-5.129;VQSLOD=1.6247;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:81.25:0,81,1000	0/0:4,0:4:9.03:0,9,111	0/0:9,0:5:15.05:0,15,186	0/0:8,0:2:6.02:0,6,74	1/1:2,6:8:6.02:86,6,0	1/1:0,6:6:3.01:43,3,0	1/1:1,5:5:6.02:86,6,0	1/1:2,14:14:13.21:371,13,0	1/1:0,6:4:2.88:43,3,0	1/1:1,8:6:16.61:220,17,0	1/1:0,4:4:3.01:43,3,0	0/0:13,0:13:24.08:0,24,297	0/0:19,0:19:33.08:0,33,397	1/1:2,10:11:12.04:172,12,0	0/0:12,0:12:24.08:0,24,297	0/0:15,0:14:30.09:0,30,371	1/1:0,10:9:24.08:344,24,0	1/1:0,3:3:3.01:43,3,0	1/1:0,4:4:12.04:173,12,0	1/1:1,8:6:15.04:188,15,0	1/1:1,8:8:21.07:300,21,0	0/0:10,0:8:24.08:0,24,297	0/0:11,0:11:21.07:0,21,260	0/0:9,0:9:27.08:0,27,334	1/1:2,13:11:21.07:275,21,0	1/1:0,6:4:9.03:129,9,0	1/1:0,9:8:3.01:43,3,0	./.
chr10	53222311	.	T	TA	3793.28	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-6.640;DP=306;FS=9.987;HRun=8;HaplotypeScore=31.2183;InbreedingCoeff=0.8901;MQ=55.26;MQ0=5;MQRankSum=-0.458;QD=22.85;ReadPosRankSum=-0.699;VQSLOD=2.5805;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:60.47:0,60,537	0/0:4,0:5:12.01:0,12,110	0/0:13,0:4:9.45:0,9,76	0/0:12,0:6:3.99:0,4,30	1/1:3,14:17:11.63:371,12,0	1/1:3,10:13:21.06:242,21,0	1/1:1,3:4:9.03:101,9,0	1/1:10,13:20:33.10:381,33,0	1/1:2,6:7:15.04:173,15,0	1/1:0,15:15:45.13:519,45,0	1/1:1,7:8:20.91:208,21,0	0/0:10,0:10:27.01:0,27,247	0/0:9,0:9:15.01:0,15,137	1/1:5,6:10:18.04:197,18,0	0/0:11,0:11:24.01:0,24,220	0/0:7,0:7:18:0,18,162	0/0:15,0:14:30.01:0,30,275	0/0:5,0:5:9:0,9,82	1/1:3,9:12:2.71:264,3,0	1/1:1,7:7:15.04:173,15,0	1/1:1,5:6:12.04:139,12,0	0/0:7,0:6:9:0,9,82	0/0:16,0:15:29.99:0,30,269	0/0:8,0:8:20.97:0,21,184	1/1:3,17:19:36.11:415,36,0	1/1:0,8:8:24.05:265,24,0	1/1:6,4:9:21.06:241,21,0	1/1:0,3:3:9.03:104,9,0
chr10	53222703	.	G	GA	2680.22	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-9.839;DP=619;FS=0.980;HRun=5;HaplotypeScore=57.4959;InbreedingCoeff=0.9993;MQ=85.01;MQ0=0;MQRankSum=-3.892;QD=33.93;ReadPosRankSum=0.142;VQSLOD=3.9428;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:51.13:0,51,547	0/0:11,0:11:33.08:0,33,355	0/0:22,0:22:51.10:0,51,529	0/0:24,0:24:57.04:0,57,577	0/0:43,0:43:99:0,117,1249	0/0:25,0:25:75.18:0,75,799	0/0:23,0:23:66.17:0,66,709	0/0:37,0:37:96.23:0,96,1025	0/0:18,0:18:51.13:0,51,548	0/0:35,0:35:87.21:0,87,935	0/0:24,0:24:72.18:0,72,774	0/0:21,0:21:57.13:0,57,605	0/0:22,0:22:63.16:0,63,676	0/0:16,0:16:48.12:0,48,516	0/0:22,0:22:66.17:0,66,709	0/0:25,0:25:69.17:0,69,741	0/0:19,0:19:45.11:0,45,484	0/0:16,0:16:42.10:0,42,451	1/1:5,20:25:60.17:772,60,0	1/1:0,11:11:36.07:450,36,0	1/1:0,8:8:24.08:316,24,0	0/0:16,0:16:48.12:0,48,516	0/0:21,0:21:63.16:0,63,677	0/0:16,0:16:42.10:0,42,451	0/0:20,0:20:57.13:0,57,604	0/0:30,0:30:87.20:0,87,923	1/1:1,33:33:99:1303,99,0	0/0:14,0:14:42.11:0,42,451
chr10	53223269	.	G	GA	5856.10	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-6.936;DP=665;FS=2.841;HRun=9;HaplotypeScore=84.2225;InbreedingCoeff=0.9921;MQ=79.81;MQ0=0;MQRankSum=-2.495;QD=24.61;ReadPosRankSum=-0.104;VQSLOD=5.3180;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:56.65:0,57,490	0/0:16,0:16:38.96:0,39,335	0/0:17,0:17:19.04:0,19,218	0/0:32,1:27:16.14:0,16,252	0/0:36,0:36:89.95:0,90,781	0/0:33,0:33:59.94:0,60,517	0/0:23,0:23:53.97:0,54,465	0/0:25,0:25:53.98:0,54,469	0/0:24,0:24:50.94:0,51,435	1/1:6,24:30:72.17:779,72,0	1/1:2,18:20:51.09:547,51,0	0/0:23,0:23:68.95:0,69,591	0/0:32,0:32:77.96:0,78,677	0/0:21,0:21:50.96:0,51,438	0/0:24,0:24:56.94:0,57,488	0/0:24,0:24:68.98:0,69,599	1/1:5,25:30:67.54:707,68,0	1/1:2,11:13:30.08:334,30,0	1/1:5,18:23:28.09:538,28,0	1/1:7,30:37:41.65:856,42,0	1/1:2,13:15:33.09:365,33,0	0/0:22,0:23:53.02:0,53,449	0/0:10,0:10:29.99:0,30,260	0/0:16,0:16:47.99:0,48,417	0/0:24,0:24:50.98:0,51,443	1/1:9,25:34:26.08:733,26,0	1/1:3,28:31:78.21:863,78,0	1/1:1,4:5:12.03:133,12,0
chr10	53223312	.	AGG	A	682.53	PASS	AB=1.000;AC=10;AF=0.179;AN=56;BaseQRankSum=11.502;DP=701;FS=6.303;HRun=3;HaplotypeScore=101.9643;InbreedingCoeff=0.2675;MQ=60.47;MQ0=20;MQRankSum=-2.038;QD=3.41;ReadPosRankSum=4.414;VQSLOD=-0.4216;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:31:81.51:0,82,1127	0/0:10,0:10:30.01:0,30,348	0/0:42,0:19:39.08:0,39,354	0/0:68,0:21:8.66:0,9,145	0/1:26,0:26:60.87:61,0,146	0/1:32,0:32:30.66:31,0,147	0/1:31,0:30:9.74:10,0,205	0/0:32,0:32:83.08:0,83,929	0/1:24,0:24:56.83:57,0,92	0/0:26,0:24:42.84:0,43,716	0/0:22,0:22:39.69:0,40,830	0/0:13,0:13:36.06:0,36,523	0/0:20,0:20:59.61:0,60,958	0/1:22,0:22:46.51:47,0,61	0/0:17,0:17:36.33:0,36,760	0/0:20,0:20:59.80:0,60,739	1/1:21,5:22:30.68:358,31,0	1/1:12,3:13:29.95:226,30,0	0/0:28,0:26:38.87:0,39,834	0/0:22,0:22:62.97:0,63,746	0/0:24,0:24:62.93:0,63,825	0/0:26,0:26:67.52:0,68,884	0/0:18,0:18:33.92:0,34,587	0/0:22,0:22:40.35:0,40,777	0/1:24,0:24:49.73:50,0,74	0/0:25,0:25:72.03:0,72,845	0/0:22,0:22:51.34:0,51,754	0/0:11,0:9:26.99:0,27,413
chr10	53223314	.	GGA	G	1458.22	PASS	AB=0.983;AC=19;AF=0.339;AN=56;BaseQRankSum=7.237;DP=700;FS=6.626;HRun=0;HaplotypeScore=98.0815;InbreedingCoeff=0.6534;MQ=60.46;MQ0=21;MQRankSum=-0.944;QD=4.23;ReadPosRankSum=3.439;VQSLOD=1.9065;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:62.39:0,62,879	0/0:10,0:10:18.06:0,18,270	0/0:40,0:18:13.23:0,13,114	0/1:70,0:20:0.39:0,0,109	1/1:9,18:27:26.87:284,27,0	1/1:9,23:32:26.45:297,26,0	1/1:10,20:29:15.04:179,15,0	0/1:33,0:33:3.54:4,0,577	1/1:7,16:23:27.08:318,27,0	0/0:27,0:25:36.64:0,37,680	0/0:21,1:22:16.59:0,17,603	0/0:13,0:13:27.07:0,27,401	0/0:21,0:21:57.19:0,57,870	1/1:5,17:22:17.95:197,18,0	0/0:17,0:17:12.12:0,12,675	0/0:21,0:21:42.13:0,42,631	1/1:26,0:22:5.45:74,5,0	0/1:14,0:12:2.73:37,0,3	0/1:27,1:26:17.21:17,0,655	0/0:21,0:21:35.85:0,36,502	0/0:25,0:25:51.61:0,52,728	0/0:26,0:26:54.64:0,55,796	0/1:17,1:18:26.99:27,0,470	0/0:22,0:22:29.12:0,29,613	1/1:4,17:21:18.06:217,18,0	0/0:26,0:26:60.16:0,60,861	0/0:21,0:21:30.76:0,31,674	0/0:14,0:12:33.03:0,33,424
chr10	53223333	.	GAT	G	833.16	PASS	AB=0.968;AC=12;AF=0.214;AN=56;BaseQRankSum=11.781;DP=665;FS=0.934;HRun=0;HaplotypeScore=86.0224;InbreedingCoeff=0.3607;MQ=58.97;MQ0=21;MQRankSum=-0.971;QD=4.25;ReadPosRankSum=3.093;VQSLOD=2.3648;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:63.13:0,63,1047	0/0:7,0:7:20.86:0,21,341	0/0:42,0:19:33.92:0,34,431	0/0:59,0:16:21.84:0,22,278	0/1:21,1:22:44.82:89,0,45	0/1:32,0:32:68.08:68,0,132	0/1:26,0:25:37.63:38,0,93	0/0:34,1:34:37.84:0,38,863	0/1:18,1:19:13.52:135,0,14	0/0:23,0:22:56.93:0,57,910	0/0:22,0:22:26.10:0,26,696	0/0:13,0:13:36.04:0,36,510	0/0:23,0:23:64.48:0,64,983	0/1:20,1:21:49.04:77,0,49	0/0:25,0:25:63.06:0,63,1014	0/0:18,0:18:54.09:0,54,775	1/1:27,1:19:38.78:317,39,0	1/1:12,0:8:20.10:172,20,0	0/0:25,0:24:33.22:0,33,844	0/0:18,0:18:37.97:0,38,597	0/0:27,0:27:44.46:0,44,923	0/0:21,0:21:34.99:0,35,864	0/1:16,1:17:9.11:9,0,574	0/0:21,0:21:18.19:0,18,740	1/1:19,0:19:10.27:95,10,0	0/0:24,0:24:47.95:0,48,1010	0/0:21,0:21:23.89:0,24,792	0/0:19,0:18:49.76:0,50,653
chr10	53223340	.	AGGG	A	399.42	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.387;DP=669;FS=8.731;HRun=6;HaplotypeScore=100.0819;InbreedingCoeff=0.9159;MQ=61.58;MQ0=20;MQRankSum=-4.721;QD=11.41;ReadPosRankSum=2.243;VQSLOD=-0.1712;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:69.19:0,69,1409	0/0:8,0:8:21.07:0,21,450	0/0:50,0:25:56.08:0,56,1099	0/0:58,0:19:33.78:0,34,566	0/0:23,0:23:42.14:0,42,857	0/0:33,0:33:57.18:0,57,1193	0/0:25,0:24:33.11:0,33,712	0/0:34,0:33:72.05:0,72,1676	0/0:18,0:18:33.11:0,33,672	0/0:22,0:21:60.21:0,60,1306	0/0:21,0:21:57.16:0,57,1153	0/0:12,0:12:33.10:0,33,674	0/0:23,0:23:69.22:0,69,1397	0/0:18,0:18:27.09:0,27,556	0/0:26,0:26:78.26:0,78,1668	0/0:17,0:17:51.16:0,51,1101	1/1:14,4:16:5.13:328,5,0	1/1:6,3:6:13.86:178,14,0	0/0:24,0:23:66.21:0,66,1344	0/0:20,0:20:51.59:0,52,967	0/0:27,0:27:72.23:0,72,1513	0/0:23,0:23:63.19:0,63,1284	0/0:18,0:18:45.15:0,45,966	0/0:21,0:21:54.15:0,54,1067	0/0:18,0:18:21.05:0,21,357	0/0:23,0:23:66.21:0,66,1338	0/0:24,0:23:63.21:0,63,1297	0/0:20,0:19:57.20:0,57,1258
chr10	53223341	.	G	GA	169.92	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.591;DP=667;FS=7.113;HRun=1;HaplotypeScore=82.3003;InbreedingCoeff=0.8288;MQ=61.86;MQ0=17;MQRankSum=-4.435;QD=4.85;ReadPosRankSum=1.065;VQSLOD=0.3120;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:69.13:0,69,884	0/0:8,0:8:24.07:0,24,313	0/0:47,0:25:41.63:0,42,687	0/0:61,0:19:37.92:0,38,382	0/0:24,0:24:47.63:0,48,566	0/0:33,0:33:55.72:0,56,741	0/0:25,0:24:33.06:0,33,433	0/0:36,0:34:86.14:0,86,1100	0/0:18,0:18:33.07:0,33,431	0/0:24,0:23:60.18:0,60,820	0/0:21,0:21:60.16:0,60,788	0/0:12,0:12:36.08:0,36,449	0/0:23,0:23:69.10:0,69,858	0/0:18,0:18:27.08:0,27,362	0/0:26,0:26:78.22:0,78,1035	0/0:17,0:17:51.15:0,51,690	1/1:15,10:16:0.48:184,0,0	1/1:5,5:6:11.21:85,11,0	0/0:23,0:23:66.20:0,66,883	0/0:20,0:20:51.02:0,51,628	0/0:27,0:27:72.20:0,72,955	0/0:23,0:23:69.18:0,69,883	0/0:18,0:18:47.13:0,47,629	0/0:19,0:19:54.11:0,54,697	0/0:17,0:17:21.02:0,21,255	0/0:24,0:24:69.15:0,69,904	0/0:24,0:23:72.09:0,72,838	0/0:19,0:19:57.18:0,57,771
chr10	53226039	.	C	CACACAT	265.02	PASS	AB=0.784;AC=16;AF=0.381;AN=42;BaseQRankSum=0.549;DP=213;FS=5.020;HRun=0;HaplotypeScore=95.9503;InbreedingCoeff=0.3226;MQ=31.10;MQ0=2;MQRankSum=-2.794;QD=3.35;ReadPosRankSum=-1.452;VQSLOD=1.0464;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:5:5.59:0,6,35	0/0:5,0:5:3.01:0,3,55	0/0:8,0:2:2.99:0,3,23	0/0:9,0:4:11.36:0,11,97	0/1:5,10:15:0.21:1,0,0	1/1:3,8:10:2.97:20,3,0	./.	1/1:5,0:5:11.93:134,12,0	1/1:7,3:10:5.91:38,6,0	0/1:10,0:10:7.87:8,0,188	0/0:10,0:10:2.63:0,3,62	./.	0/0:10,0:10:2.92:0,3,17	./.	./.	./.	1/1:2,0:2:3.01:72,3,0	1/1:1,0:1:3.01:69,3,0	0/1:6,0:3:30.73:31,0,86	0/0:16,0:16:1.55:0,2,4	0/0:2,0:2:1.55:0,2,4	./.	0/0:5,0:5:0.33:0,0,1	./.	0/1:2,12:14:0:0,0,0	0/0:13,0:13:22.74:0,23,132	0/0:11,0:11:9.94:0,10,115	1/1:4,0:4:0.78:14,1,0
chr10	53227628	.	CA	C	3117.28	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=12.236;DP=590;FS=1.754;HRun=7;HaplotypeScore=52.4431;InbreedingCoeff=0.9974;MQ=82.70;MQ0=0;MQRankSum=-0.673;QD=24.35;ReadPosRankSum=2.590;VQSLOD=3.9764;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:72.19:0,72,887	0/0:12,0:12:36.11:0,36,443	0/0:18,0:18:48.15:0,48,614	0/0:15,0:15:35.19:0,35,399	1/1:1,33:34:87.19:887,87,0	1/1:2,20:22:54.12:551,54,0	1/1:0,15:15:39.09:398,39,0	0/0:31,0:31:84.26:0,84,1045	1/1:2,16:18:45.10:459,45,0	0/0:23,0:23:63.20:0,63,793	0/0:25,0:25:75.23:0,75,930	0/0:14,0:14:42.12:0,42,516	0/0:21,0:21:51.16:0,51,642	1/1:2,15:17:45.10:459,45,0	0/0:22,0:22:63.20:0,63,793	0/0:20,1:21:26.56:0,27,638	0/0:21,0:21:60.18:0,60,742	0/0:6,0:6:18.03:0,18,211	0/0:23,0:23:66.21:0,66,830	0/0:29,0:29:69.22:0,69,868	0/0:10,0:10:27.09:0,27,339	0/0:17,0:17:51.16:0,51,642	0/0:33,0:33:96.29:0,96,1195	0/0:17,0:17:51.16:0,51,642	1/1:1,21:22:54.12:551,54,0	0/0:36,0:36:99:0,102,1241	0/0:32,0:32:90.29:0,90,1132	0/0:10,0:10:24.08:0,24,302
chr10	53228238	.	T	TA	6373.10	PASS	AB=0.573;AC=30;AF=0.536;AN=56;BaseQRankSum=-10.139;DP=557;FS=2.511;HRun=11;HaplotypeScore=55.8279;InbreedingCoeff=0.8205;MQ=71.80;MQ0=0;MQRankSum=-2.287;QD=19.49;ReadPosRankSum=-0.362;VQSLOD=5.7660;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:62.64:0,63,472	0/0:12,0:12:29.86:0,30,231	0/0:14,0:14:29.84:0,30,225	0/0:6,0:6:1.26:0,1,38	0/1:7,18:25:0.59:417,0,1	1/1:3,17:20:33.87:518,34,0	0/1:5,17:22:1.38:351,0,1	0/0:30,1:32:28.22:0,28,384	1/1:5,13:18:9.83:281,10,0	1/1:6,22:29:42.66:572,43,0	1/1:3,21:24:50.94:480,51,0	0/0:14,0:16:39.88:0,40,281	0/0:24,0:24:50.70:0,51,387	1/1:4,17:22:47.93:471,48,0	0/0:26,0:26:68.71:0,69,534	0/0:22,0:22:62.76:0,63,488	1/1:3,18:21:1.63:380,2,0	1/1:1,9:10:27.05:274,27,0	1/1:3,17:21:47.18:479,47,0	1/1:3,17:24:32.98:402,33,0	1/1:4,4:8:7.10:115,7,0	0/0:18,1:19:11.37:0,11,271	0/0:25,0:25:53.74:0,54,416	0/0:11,0:11:26.78:0,27,199	1/1:4,16:19:18.85:373,19,0	1/1:6,24:30:73.21:672,73,0	1/1:1,18:19:15.85:342,16,0	1/1:2,12:14:6.82:247,7,0
chr10	53229665	.	ACC	A	3227.04	PASS	AB=0.753;AC=27;AF=0.482;AN=56;BaseQRankSum=-2.000;DP=477;FS=6.085;HRun=12;HaplotypeScore=70.1591;InbreedingCoeff=0.4526;MQ=81.33;MQ0=0;MQRankSum=-0.829;QD=11.09;ReadPosRankSum=4.690;VQSLOD=1.8008;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:19,2:25:12.20:58,0,12	0/0:12,0:12:14.51:0,15,147	0/0:24,0:23:10.84:0,11,420	0/1:14,0:12:16.62:17,0,136	0/1:5,1:16:13.54:14,0,41	0/1:4,1:15:9.65:10,0,76	0/0:3,0:15:22.46:0,22,79	0/0:16,0:21:12.48:0,12,44	0/1:12,1:15:21.79:34,0,22	1/1:6,10:16:35.96:334,36,0	1/1:5,9:15:35.78:346,36,0	0/0:14,0:14:13.98:0,14,127	0/0:15,0:15:26.98:0,27,274	0/1:17,1:21:62.52:83,0,63	0/0:19,0:19:38.50:0,38,353	0/0:17,0:17:0.99:0,1,277	1/1:13,16:30:56.82:551,57,0	1/1:4,5:9:14.99:151,15,0	1/1:4,7:11:17.92:167,18,0	1/1:7,11:20:23.82:366,24,0	1/1:7,16:26:44.55:420,45,0	0/0:14,0:17:20.53:0,21,232	0/0:5,0:8:10.50:0,10,71	0/0:19,0:24:28.41:0,28,260	0/1:5,1:13:17.52:18,0,22	1/1:14,11:26:50.78:487,51,0	1/1:10,5:15:30:284,30,0	1/1:1,3:4:9:92,9,0
chr10	53233404	.	G	GC	15878.31	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=-16.895;DP=853;FS=1.109;HRun=5;HaplotypeScore=77.8974;InbreedingCoeff=0.9998;MQ=83.42;MQ0=0;MQRankSum=-4.477;QD=35.29;ReadPosRankSum=0.979;VQSLOD=4.8368;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:63,0:63:99:0,162,1741	0/0:12,0:12:33.08:0,33,355	0/0:33,0:33:87.19:0,87,920	0/0:20,0:20:44.13:0,44,489	1/1:4,29:33:87.27:1132,87,0	1/1:2,21:23:60.20:790,60,0	1/1:5,27:32:78.25:1026,78,0	0/0:34,0:34:96.21:0,96,1017	1/1:2,33:35:96.31:1263,96,0	1/1:2,32:35:96.25:1220,96,0	1/1:2,12:14:39.13:511,39,0	0/0:40,0:40:99:0,114,1225	0/0:41,0:41:99:0,120,1290	1/1:4,42:46:99:1559,120,0	0/0:42,0:42:99:0,123,1313	0/0:32,0:32:96.24:0,96,1032	1/1:2,29:31:78.25:1026,78,0	1/1:1,16:17:48.16:632,48,0	1/1:1,12:13:36.10:457,36,0	1/1:1,24:24:66.17:849,66,0	1/1:3,44:47:99:1737,132,0	0/0:40,0:40:99:0,117,1250	0/0:17,0:17:42.10:0,42,451	0/0:29,0:29:87.22:0,87,935	1/1:1,34:35:99:1303,99,0	1/1:0,33:33:96.28:1230,96,0	1/1:0,22:22:60.20:789,60,0	1/1:0,9:9:27.09:355,27,0
chr10	53235783	.	CG	C	619.05	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-0.785;DP=543;FS=9.441;HRun=2;HaplotypeScore=112.9169;InbreedingCoeff=0.8934;MQ=75.67;MQ0=0;MQRankSum=-3.525;QD=29.48;ReadPosRankSum=-2.815;VQSLOD=1.6659;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:72.21:0,72,1021	0/0:2,0:2:6.02:0,6,89	0/0:8,0:8:18.01:0,18,207	0/0:13,0:13:26.77:0,27,304	0/0:34,0:34:99:0,99,1294	0/0:22,0:22:63.20:0,63,843	0/0:12,0:12:36.09:0,36,467	1/1:7,14:21:57.18:714,57,0	0/0:21,0:21:63.19:0,63,846	0/0:25,0:25:72.10:0,72,790	0/0:25,0:25:74.96:0,75,771	0/0:10,0:10:30.10:0,30,445	0/0:20,0:20:60.17:0,60,843	0/0:15,0:15:45.13:0,45,581	0/0:25,0:25:69.21:0,69,990	0/0:15,0:15:45.15:0,45,671	0/0:29,0:29:86.85:0,87,778	0/0:20,0:20:53.04:0,53,518	0/0:24,0:24:72.07:0,72,734	0/0:30,0:30:83.51:0,84,769	0/0:11,0:11:30.01:0,30,301	0/0:19,0:19:57.14:0,57,789	0/0:23,0:23:63.16:0,63,877	0/0:8,0:8:24.08:0,24,359	0/0:24,0:24:69.22:0,69,940	0/0:33,0:33:92.81:0,93,936	0/0:18,0:17:44.57:0,45,361	0/0:11,0:11:23.81:0,24,259
chr10	53235788	.	TA	T	5187.99	PASS	AB=0.886;AC=36;AF=0.643;AN=56;BaseQRankSum=13.741;DP=532;FS=1.259;HRun=11;HaplotypeScore=94.2437;InbreedingCoeff=0.8241;MQ=69.95;MQ0=0;MQRankSum=-0.392;QD=12.47;ReadPosRankSum=-0.564;VQSLOD=4.6720;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:21,4:26:4.94:5,0,538	0/0:2,0:2:3.01:0,3,32	0/0:4,0:4:5.38:0,5,37	0/0:8,1:9:2.99:0,3,23	1/1:1,0:33:61.90:185,62,0	1/1:1,0:22:38.70:112,39,0	1/1:2,0:12:18.33:53,18,0	1/1:6,14:21:43.27:317,43,0	1/1:3,0:22:36.66:106,37,0	1/1:5,19:24:56.90:465,57,0	1/1:5,18:25:57.99:455,58,0	0/0:12,0:12:30:0,30,299	0/0:20,0:20:49.90:0,50,498	1/1:0,0:15:28.52:82,29,0	0/0:24,0:24:57.14:0,57,607	0/0:15,0:15:39.08:0,39,408	1/1:2,26:29:76.95:622,77,0	1/1:4,17:21:41.94:345,42,0	1/1:4,19:23:56.89:461,57,0	1/1:4,27:31:74.69:595,75,0	1/1:0,10:10:20.96:172,21,0	0/1:17,2:19:1.17:1,0,392	0/0:18,2:20:23.07:0,23,455	0/0:10,0:10:30.06:0,30,312	1/1:3,0:22:36.65:106,37,0	1/1:5,22:27:65.90:539,66,0	1/1:1,22:23:44.50:369,45,0	1/1:1,10:11:23.97:197,24,0
chr10	53237422	.	A	AC	1019.58	PASS	AB=0.750;AC=15;AF=0.268;AN=56;BaseQRankSum=3.110;DP=323;FS=0.656;HRun=6;HaplotypeScore=55.5049;InbreedingCoeff=0.8847;MQ=73.00;MQ0=0;MQRankSum=-5.141;QD=14.78;ReadPosRankSum=-2.425;VQSLOD=2.5096;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:44.80:0,45,434	0/0:3,0:3:9.02:0,9,91	0/0:10,0:10:20.95:0,21,194	0/0:6,0:6:9.02:0,9,91	0/0:12,0:12:29.98:0,30,286	0/0:10,0:10:15.03:0,15,153	0/0:26,0:26:69.14:0,69,695	0/0:1,0:13:14.87:0,15,50	0/0:10,0:10:24.03:0,24,237	1/1:5,3:8:18.02:178,18,0	0/1:4,2:6:0:0,0,0	0/0:13,0:13:22.14:0,22,241	0/0:8,2:10:11.07:0,11,127	0/0:21,0:21:50.94:0,51,500	0/0:9,0:9:13.76:0,14,127	0/0:11,0:11:31.31:0,31,309	0/0:22,1:22:52.57:0,53,509	0/0:11,0:11:18.41:0,18,202	1/1:3,2:5:9.03:108,9,0	1/1:3,4:7:9.02:98,9,0	1/1:11,5:15:11.94:125,12,0	0/0:6,0:6:11.05:0,11,94	0/0:11,0:11:24.04:0,24,236	0/0:13,0:13:30.07:0,30,306	0/0:15,0:15:30.06:0,30,302	1/1:4,9:13:36.09:404,36,0	1/1:7,4:11:19.10:181,19,0	1/1:2,1:3:9.03:111,9,0
chr10	53237429	.	A	AC	731.42	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=4.666;DP=305;FS=2.731;HRun=6;HaplotypeScore=53.8196;InbreedingCoeff=0.7732;MQ=73.83;MQ0=0;MQRankSum=-6.637;QD=12.83;ReadPosRankSum=-2.800;VQSLOD=1.7445;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:32.86:0,33,342	0/0:3,0:3:9.02:0,9,96	0/0:14,0:14:0.11:0,0,243	0/0:3,0:3:6.02:0,6,65	0/0:12,0:12:24.06:0,24,257	0/0:10,0:10:15.04:0,15,161	0/0:29,0:29:60.14:0,60,644	0/0:12,0:12:27.05:0,27,269	0/0:8,0:8:21.05:0,21,225	1/1:3,3:6:12.03:131,12,0	0/0:1,3:4:0:0,0,0	0/0:11,0:11:21.04:0,21,225	0/0:9,0:9:8.89:0,9,95	0/0:21,0:21:50.91:0,51,528	0/0:8,0:8:11.90:0,12,129	0/0:11,0:11:24.01:0,24,258	0/0:25,0:24:32.31:0,32,544	0/0:11,0:11:21.03:0,21,224	1/1:1,3:4:9.03:107,9,0	1/1:2,5:7:6.02:69,6,0	1/1:2,10:12:5.93:70,6,0	0/1:4,0:4:0:0,0,0	0/0:10,0:10:18.03:0,18,186	0/0:14,0:14:39.97:0,40,412	0/0:15,0:15:30.07:0,30,321	1/1:5,8:13:30.56:325,31,0	1/1:4,4:8:15.48:160,15,0	1/1:2,1:3:4.26:41,4,0
chr10	53237446	.	TC	T	3738.24	PASS	AC=26;AF=0.500;AN=52;BaseQRankSum=3.084;DP=290;FS=1.009;HRun=5;HaplotypeScore=45.0909;InbreedingCoeff=0.9168;MQ=90.11;MQ0=0;MQRankSum=-4.423;QD=24.43;ReadPosRankSum=1.557;VQSLOD=2.4549;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:14:36.12:0,36,492	0/0:3,0:3:9.03:0,9,123	0/0:18,0:18:38.30:0,38,532	0/0:10,0:10:30.09:0,30,388	1/1:2,15:17:42.12:474,42,0	1/1:1,10:11:15.04:170,15,0	1/1:2,26:28:69.20:783,69,0	0/0:10,0:10:27.07:0,27,340	1/1:2,6:8:18.05:204,18,0	1/1:1,5:6:15.04:170,15,0	1/1:2,3:5:5.72:67,6,0	0/0:11,0:11:30.10:0,30,408	0/0:3,0:3:9.03:0,9,123	1/1:2,19:21:57.15:637,57,0	0/0:2,0:2:6.02:0,6,82	0/0:9,0:9:24.08:0,24,328	0/0:19,0:18:45.13:0,45,593	0/0:15,0:15:36.10:0,36,472	1/1:1,5:6:15.04:170,15,0	1/1:2,7:9:8.82:102,9,0	1/1:2,13:15:17.71:189,18,0	./.	0/0:6,0:6:9.03:0,9,123	0/0:16,0:16:45.15:0,45,615	1/1:0,16:16:42.12:476,42,0	1/1:2,4:6:12.03:136,12,0	1/1:1,4:5:15.03:160,15,0	./.
chr10	53237515	.	AC	A	940.67	PASS	AB=0.862;AC=19;AF=0.339;AN=56;BaseQRankSum=-2.626;DP=377;FS=26.550;HRun=11;HaplotypeScore=57.9670;InbreedingCoeff=0.3328;MQ=73.70;MQ0=1;MQRankSum=0.668;QD=5.63;ReadPosRankSum=1.041;VQSLOD=0.1434;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:12,1:27:8.98:0,9,72	1/1:3,1:4:2.98:25,3,0	0/1:13,1:11:23.15:23,0,76	0/0:12,0:10:8.89:0,9,61	0/1:10,1:11:18.15:18,0,27	0/1:10,1:11:11.35:11,0,133	0/1:22,4:26:56.46:56,0,247	1/1:8,0:13:6.04:18,6,0	1/1:9,3:12:20.89:168,21,0	0/0:12,0:12:22.06:0,22,98	0/0:12,0:12:26.43:0,26,166	0/1:10,3:13:31.12:31,0,90	0/1:5,3:8:12.89:62,0,13	0/0:10,0:10:18.44:0,18,147	0/0:11,1:12:2.38:0,2,196	0/1:5,1:6:11.41:11,0,62	1/1:5,13:18:35.92:295,36,0	1/1:9,16:25:44.88:366,45,0	0/0:11,0:11:25.55:0,26,130	0/0:7,0:7:20.46:0,20,121	0/0:33,0:33:87.86:0,88,532	0/0:8,0:8:8.99:0,9,74	1/1:5,0:5:5.78:37,6,0	0/0:16,0:16:42.90:0,43,393	0/0:13,1:14:11.05:0,11,138	0/0:11,0:11:28.54:0,29,152	0/0:18,0:18:52.89:0,53,327	0/0:7,0:7:20.63:0,21,129
chr10	53239531	.	TTG	T	1241.01	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=1.313;DP=511;FS=6.442;HRun=0;HaplotypeScore=88.6031;InbreedingCoeff=0.9235;MQ=66.57;MQ0=1;MQRankSum=2.059;QD=36.50;ReadPosRankSum=-4.252;VQSLOD=4.3626;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:78.02:0,78,1194	0/0:9,0:9:27.09:0,27,457	0/0:11,0:9:18.05:0,18,269	0/0:8,0:6:8.73:0,9,222	0/0:31,0:31:77.70:0,78,1350	0/0:13,0:13:33.04:0,33,513	0/0:8,0:8:24.06:0,24,355	1/1:0,34:34:99:1336,102,0	0/0:16,0:16:45.12:0,45,691	0/0:23,0:23:66.89:0,67,432	0/0:18,0:18:52.07:0,52,294	0/0:13,0:13:39.09:0,39,575	0/0:13,0:13:39.13:0,39,654	0/0:16,0:16:45.02:0,45,641	0/0:18,0:18:51.14:0,51,789	0/0:22,0:22:66.20:0,66,1048	0/0:24,0:24:72.20:0,72,1132	0/0:23,0:23:54.18:0,54,876	0/0:21,0:21:60.72:0,61,337	0/0:22,0:22:59.90:0,60,357	0/0:10,0:10:25.89:0,26,141	0/0:15,0:15:44.94:0,45,641	0/0:18,0:18:54.12:0,54,798	0/0:6,0:6:18:0,18,236	0/0:26,0:26:75.24:0,75,1242	0/0:32,0:32:91.27:0,91,497	0/0:22,0:22:60.32:0,60,317	0/0:13,0:13:37.50:0,38,199
chr10	53239533	.	GT	G	3562.32	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=14.027;DP=522;FS=0.356;HRun=10;HaplotypeScore=72.6474;InbreedingCoeff=0.9784;MQ=66.38;MQ0=1;MQRankSum=-2.601;QD=17.81;ReadPosRankSum=-0.370;VQSLOD=4.0767;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,1:26:44.38:0,44,705	0/0:10,0:10:30.07:0,30,325	0/0:9,0:8:17.75:0,18,192	0/0:9,0:7:16.75:0,17,161	0/0:32,0:32:83.95:0,84,894	0/0:15,0:15:33.04:0,33,344	0/0:7,0:8:20.87:0,21,204	1/1:35,0:35:10.65:65,11,0	0/0:17,0:18:44.91:0,45,458	1/1:6,17:23:47.96:417,48,0	1/1:3,15:18:44.98:391,45,0	0/0:14,0:14:33.09:0,33,365	0/0:13,0:13:39.10:0,39,424	0/0:15,0:15:33.06:0,33,341	0/0:17,0:18:47.95:0,48,504	0/0:22,0:22:60.15:0,60,656	0/0:24,0:25:69.01:0,69,735	0/0:21,0:23:59.80:0,60,608	1/1:3,18:21:53.99:469,54,0	1/1:2,20:22:50.75:441,51,0	1/1:1,11:12:23.99:208,24,0	0/0:16,0:16:16.47:0,16,357	0/0:18,0:18:39.11:0,39,431	0/0:4,0:4:9.02:0,9,99	0/0:26,0:26:72.19:0,72,788	1/1:3,29:32:86.97:752,87,0	1/1:2,21:23:59.98:521,60,0	1/1:3,11:14:35.79:300,36,0
chr10	53239609	.	CTT	C	2319.77	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=0.180;DP=491;FS=4.267;HRun=10;HaplotypeScore=88.7525;InbreedingCoeff=0.9819;MQ=69.29;MQ0=1;MQRankSum=3.230;QD=24.94;ReadPosRankSum=4.272;VQSLOD=3.6287;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:29:80.74:0,81,1203	0/0:7,0:9:27.07:0,27,370	0/0:12,0:13:29.48:0,29,334	0/0:2,0:3:8.18:0,8,62	1/1:1,15:16:42.10:468,42,0	1/1:1,14:15:33.09:368,33,0	1/1:1,9:10:21.06:234,21,0	0/0:19,0:19:33.10:0,33,502	1/1:1,14:15:36.10:401,36,0	0/0:23,0:23:60:0,60,559	0/0:23,0:23:63.94:0,64,548	0/0:22,0:23:66.13:0,66,955	0/0:20,0:20:60.20:0,60,950	1/1:1,19:19:54.14:602,54,0	0/0:21,0:21:60.17:0,60,868	0/0:20,0:23:64.66:0,65,870	0/0:21,0:22:54.15:0,54,768	0/0:26,0:29:69.17:0,69,986	0/0:18,0:18:51.02:0,51,473	0/0:13,0:13:38.77:0,39,323	0/0:9,0:9:20.88:0,21,165	0/0:7,0:7:18.05:0,18,264	0/0:15,0:15:42.13:0,42,645	0/0:13,0:13:36.12:0,36,568	1/1:2,15:17:38.99:435,39,0	0/0:34,0:35:95.87:0,96,857	0/0:21,0:23:65.85:0,66,583	0/0:8,0:8:23.99:0,24,214
chr10	53239618	.	T	TTTTTTG	8130.04	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=1.584;DP=481;FS=0.357;HRun=0;HaplotypeScore=119.2888;InbreedingCoeff=0.9757;MQ=69.59;MQ0=1;MQRankSum=-7.189;QD=53.84;ReadPosRankSum=-9.690;VQSLOD=2.1706;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:54.06:0,54,1540	0/0:9,0:9:27.04:0,27,454	0/0:12,0:12:27.52:0,28,450	0/0:4,0:4:4.48:0,4,104	0/0:17,0:17:45.11:0,45,640	0/0:16,0:15:39.11:0,39,535	0/0:10,0:10:24.06:0,24,331	0/0:13,0:13:36.09:0,36,678	0/0:15,0:15:39.12:0,39,552	1/1:13,8:22:65.87:1347,66,0	1/1:14,5:22:64.80:1183,65,0	0/0:23,0:23:32.25:0,32,1132	0/0:24,0:24:72.19:0,72,1367	0/0:19,0:18:54.18:0,54,789	0/0:21,0:21:60.11:0,60,1062	0/0:24,0:24:66.15:0,66,1220	0/0:18,0:18:51.06:0,51,919	0/0:25,0:25:69.05:0,69,1251	1/1:12,4:17:51.04:1017,51,0	1/1:9,3:14:41.93:744,42,0	1/1:6,3:10:27.02:494,27,0	0/0:9,0:9:27.05:0,27,423	0/0:15,0:15:39.10:0,39,819	0/0:14,0:14:39.12:0,39,761	0/0:15,0:15:38.96:0,39,570	1/1:26,6:34:95.85:1567,96,0	1/1:16,6:24:72.09:1477,72,0	1/1:5,1:8:23.98:302,24,0
chr10	53239835	.	CT	C	1323.25	PASS	AB=0.732;AC=21;AF=0.375;AN=56;BaseQRankSum=-0.719;DP=451;FS=9.116;HRun=16;HaplotypeScore=61.4295;InbreedingCoeff=0.3198;MQ=76.23;MQ0=3;MQRankSum=-1.274;QD=6.07;ReadPosRankSum=3.624;VQSLOD=2.1774;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:11,2:14:6.31:6,0,144	0/1:3,3:7:21.47:21,0,48	0/0:22,0:12:8.63:0,9,48	0/0:23,0:16:1.12:0,1,32	0/0:11,0:26:30.39:0,30,224	0/0:8,1:25:24.91:0,25,191	0/1:5,0:9:9.22:9,0,22	1/1:10,12:23:28.28:165,28,0	0/0:5,1:16:13.36:0,13,133	1/1:4,8:13:25.53:149,26,0	0/1:11,10:24:4.96:154,0,5	0/0:7,0:11:20.76:0,21,154	0/0:9,0:9:17.96:0,18,146	0/0:7,0:17:29.10:0,29,180	0/1:10,2:12:9.07:9,0,145	0/0:17,1:19:14.11:0,14,251	1/1:1,13:16:30.55:173,31,0	0/1:5,4:9:10.69:57,0,11	1/1:6,9:15:20.38:125,20,0	0/1:9,12:21:14.17:129,0,14	1/1:1,6:7:11.74:72,12,0	0/0:8,0:8:17.92:0,18,141	0/0:16,1:18:5.67:0,6,134	0/0:7,0:7:14.97:0,15,126	0/0:15,0:31:40.44:0,40,237	0/1:8,14:23:9.31:136,0,9	1/1:5,15:21:44.88:262,45,0	0/1:1,3:4:13.36:42,0,13
chr10	53240399	.	C	CTGGGAA	7459.63	PASS	AB=0.960;AC=13;AF=0.232;AN=56;BaseQRankSum=-2.341;DP=642;FS=5.268;HRun=0;HaplotypeScore=133.9691;InbreedingCoeff=0.8987;MQ=57.21;MQ0=0;MQRankSum=-13.643;QD=43.88;ReadPosRankSum=-4.867;VQSLOD=3.3747;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:81.28:0,81,1814	0/0:10,0:10:30.10:0,30,663	0/0:23,0:20:42.14:0,42,856	0/0:21,0:20:34.91:0,35,883	1/1:8,17:27:41.75:514,42,0	1/1:4,15:19:42.14:1444,42,0	1/1:10,14:26:36.12:1060,36,0	0/0:32,0:32:57.19:0,57,1224	1/1:5,20:25:54.15:1729,54,0	0/0:21,0:21:63.20:0,63,1346	0/0:10,0:10:27.09:0,27,569	0/0:19,0:19:45.15:0,45,974	0/0:28,0:28:84.29:0,84,1862	1/1:2,18:21:48.09:1484,48,0	0/0:27,0:27:66.22:0,66,1379	0/1:23,1:24:39.97:40,0,1260	0/0:29,0:29:75.20:0,75,1572	0/0:25,0:25:65.28:0,65,1408	0/0:20,0:20:39.10:0,39,803	0/0:17,0:17:48.16:0,48,1026	0/0:37,0:37:84.29:0,84,1886	0/0:29,0:29:75.25:0,75,1642	0/0:15,0:15:42.14:0,42,943	0/0:24,0:24:69.19:0,69,1503	1/1:9,17:28:45.07:1189,45,0	0/0:15,0:15:36.12:0,36,769	0/0:32,0:32:90.29:0,90,1957	0/0:7,0:7:21.07:0,21,472
chr10	53241971	.	TA	T	2144.52	PASS	AB=0.722;AC=15;AF=0.268;AN=56;BaseQRankSum=-4.490;DP=566;FS=0.814;HRun=13;HaplotypeScore=73.0351;InbreedingCoeff=0.8660;MQ=69.54;MQ0=1;MQRankSum=2.333;QD=12.61;ReadPosRankSum=2.055;VQSLOD=3.9495;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:8,5:13:16.83:17,0,167	0/0:11,1:12:5.14:0,5,212	0/0:12,0:9:17.68:0,18,138	0/0:12,0:9:6.48:0,6,58	1/1:9,24:33:43.33:426,43,0	1/1:2,15:20:44.89:302,45,0	1/1:3,14:17:32.81:241,33,0	1/1:9,22:31:35.40:389,35,0	1/1:2,13:15:41.76:306,42,0	0/0:13,0:27:48.91:0,49,275	0/0:6,0:26:55.58:0,56,292	0/0:15,0:15:33.05:0,33,321	0/0:18,0:18:26.15:0,26,410	1/1:2,17:19:38.77:285,39,0	0/0:21,1:22:38.19:0,38,533	0/0:25,0:25:69.09:0,69,661	0/0:1,0:19:36.93:0,37,186	0/0:6,0:25:51.40:0,51,271	0/0:7,1:21:24.10:0,24,212	0/0:4,0:22:51.96:0,52,300	0/0:1,0:11:19.89:0,20,100	0/0:22,1:24:34.69:0,35,470	0/0:27,1:30:50.23:0,50,597	0/0:13,0:13:36.04:0,36,343	1/1:1,20:22:52.71:378,53,0	0/0:4,0:24:63.48:0,63,377	0/0:7,0:29:63.06:0,63,348	0/0:1,0:9:11.36:0,11,57
chr10	53242248	.	C	CTT	19626.19	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-17.083;DP=698;FS=4.075;HRun=1;HaplotypeScore=71.0029;InbreedingCoeff=0.9991;MQ=84.97;MQ0=2;MQRankSum=-5.300;QD=52.90;ReadPosRankSum=3.739;VQSLOD=4.8397;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:93.28:0,93,1379	0/0:7,0:7:21.07:0,21,321	0/0:25,0:25:69.20:0,69,1009	0/0:21,0:21:57.16:0,57,817	1/1:0,31:31:90.22:1645,90,0	1/1:1,29:31:84.29:1623,84,0	1/1:0,21:21:60.21:1159,60,0	0/0:36,0:36:99:0,105,1608	1/1:1,21:22:63.22:1218,63,0	1/1:0,32:32:96.33:1855,96,0	1/1:3,19:22:54.18:1025,54,0	0/0:26,0:26:75.24:0,75,1126	0/0:29,0:29:87.30:0,87,1332	1/1:0,28:28:75.26:1449,75,0	0/0:25,0:25:75.25:0,75,1149	0/0:32,0:32:93.32:0,93,1424	0/0:23,0:23:69.23:0,69,1054	0/0:9,0:9:24.06:0,24,345	1/1:4,18:22:66.20:1238,66,0	1/1:2,28:29:84.17:1510,84,0	1/1:0,34:34:96.33:1855,96,0	0/0:22,0:22:66.21:0,66,990	0/0:23,0:23:63.18:0,63,919	0/0:15,0:15:42.13:0,42,621	1/1:1,21:23:57.20:1101,57,0	1/1:2,25:27:35.28:1424,35,0	1/1:2,28:31:90.26:1656,90,0	1/1:0,15:16:45.15:868,45,0
chr10	53242858	.	ATT	A	6432.20	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-2.677;DP=533;FS=30.776;HRun=10;HaplotypeScore=78.5942;InbreedingCoeff=0.9810;MQ=76.84;MQ0=0;MQRankSum=0.078;QD=29.24;ReadPosRankSum=1.454;VQSLOD=3.1607;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:20:59.57:0,60,793	0/0:3,0:3:9.03:0,9,143	0/0:12,0:12:30.07:0,30,393	0/0:10,0:10:21.03:0,21,265	0/0:4,0:25:48.22:0,48,164	0/0:3,1:22:14.48:0,14,121	0/0:1,0:12:21.21:0,21,71	0/0:8,0:36:78.74:0,79,350	0/0:4,0:21:43.21:0,43,180	1/1:2,23:25:69.15:756,69,0	1/1:1,21:22:57.14:631,57,0	0/0:24,0:25:75.25:0,75,1152	0/0:15,0:15:45.15:0,45,713	0/0:2,1:28:25.86:0,26,161	0/0:26,0:26:66.22:0,66,1027	0/0:16,0:16:45.14:0,45,692	1/1:1,23:24:54.14:602,54,0	1/1:1,14:15:33.09:368,33,0	1/1:3,16:19:45.09:488,45,0	1/1:0,35:35:99:1100,99,0	1/1:1,5:6:15.03:167,15,0	0/0:10,0:10:21.07:0,21,331	0/0:10,0:10:27.08:0,27,407	0/0:8,0:8:24.08:0,24,381	0/0:2,0:13:22.46:0,22,77	1/1:2,40:42:99:1283,117,0	1/1:0,26:26:78.21:870,78,0	1/1:0,6:6:15.04:167,15,0
chr10	53243551	.	GAA	G	1286.82	PASS	AB=0.792;AC=13;AF=0.232;AN=56;BaseQRankSum=5.669;DP=512;FS=3.690;HRun=16;HaplotypeScore=66.5802;InbreedingCoeff=0.7870;MQ=57.98;MQ0=8;MQRankSum=2.399;QD=9.68;ReadPosRankSum=4.946;VQSLOD=1.7952;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,1:36:51.98:0,52,757	0/0:4,0:8:22.79:0,23,234	0/0:19,0:5:3.01:0,3,32	0/0:13,0:4:5.88:0,6,55	1/1:7,14:27:52.16:371,52,0	1/1:6,8:15:12.49:213,12,0	1/1:3,9:13:26.59:212,27,0	0/0:18,0:23:41.24:0,41,378	1/1:2,12:17:23.29:216,23,0	0/0:13,0:17:22.60:0,23,181	0/0:16,0:20:35.45:0,35,400	0/0:11,1:11:0.75:0,1,222	0/0:15,0:18:30.49:0,30,315	1/1:9,6:15:20.54:157,21,0	0/0:22,0:24:46.20:0,46,492	0/0:16,0:17:37.99:0,38,424	0/0:34,0:39:76.13:0,76,944	0/0:11,0:15:25.55:0,26,313	0/0:13,0:14:29.31:0,29,283	0/0:18,1:22:18.72:0,19,407	0/0:13,1:14:7.73:0,8,284	0/0:6,0:7:14.51:0,15,138	0/0:13,0:14:22.31:0,22,277	0/0:12,0:15:30.05:0,30,350	1/1:6,16:26:27.73:292,28,0	0/1:14,2:19:9.98:10,0,302	0/0:19,0:21:57.71:0,58,627	0/0:4,0:4:12.02:0,12,141
chr10	53243960	.	A	AT	943.80	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-7.454;DP=605;FS=2.279;HRun=7;HaplotypeScore=60.3265;InbreedingCoeff=0.9718;MQ=80.53;MQ0=0;MQRankSum=0.480;QD=27.76;ReadPosRankSum=-5.512;VQSLOD=1.7229;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:90.14:0,90,869	0/0:16,0:16:48.06:0,48,458	0/0:24,0:24:55.77:0,56,478	0/0:19,0:18:22.39:0,22,303	0/0:34,0:34:87.11:0,87,832	0/0:24,0:24:66.05:0,66,620	0/0:15,0:15:18.31:0,18,347	1/1:4,30:34:90.22:1039,90,0	0/0:21,0:21:60.10:0,60,579	0/0:37,0:37:99:0,108,1039	0/0:14,0:14:42.07:0,42,405	0/0:18,0:18:48.08:0,48,463	0/0:16,0:16:45.06:0,45,428	0/0:18,0:18:48.04:0,48,454	0/0:32,0:32:93.15:0,93,898	0/0:24,0:24:72.08:0,72,684	0/0:25,0:25:69.09:0,69,660	0/0:7,0:7:17.96:0,18,157	0/0:9,0:9:27.02:0,27,252	0/0:21,0:20:60.09:0,60,579	0/0:19,0:19:48.04:0,48,451	0/0:13,0:13:39.06:0,39,377	0/0:22,0:22:60.09:0,60,579	0/0:10,0:10:27.03:0,27,257	0/0:28,0:28:81.11:0,81,773	0/0:27,0:28:79.64:0,80,735	0/0:35,0:35:96.11:0,96,911	0/0:7,0:7:18:0,18,163
chr10	53244156	.	C	CTCTA	4574.47	PASS	AB=0.917;AC=18;AF=0.375;AN=48;BaseQRankSum=-1.657;DP=581;FS=12.805;HRun=0;HaplotypeScore=145.8920;InbreedingCoeff=0.6761;MQ=68.67;MQ0=3;MQRankSum=-0.855;QD=19.30;ReadPosRankSum=-1.941;VQSLOD=3.6434;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:1.30:0,1,340	0/0:9,0:9:12.04:0,12,183	./.	./.	0/0:13,0:21:7.25:0,7,58	0/0:13,0:21:16.83:0,17,145	0/0:15,0:19:5.35:0,5,21	./.	0/0:12,0:16:13.57:0,14,100	1/1:17,0:27:54.06:775,54,0	./.	0/0:14,0:14:18.05:0,18,253	0/0:25,0:25:36.10:0,36,525	0/0:17,0:24:6.48:0,6,57	0/0:23,0:23:30.10:0,30,457	0/0:17,0:17:21.07:0,21,318	1/1:13,4:17:12.04:243,12,0	1/1:18,2:20:9.01:128,9,0	0/1:12,3:15:33.64:197,0,34	1/1:15,17:32:39.13:906,39,0	1/1:14,5:19:27.06:548,27,0	0/0:18,0:18:33.11:0,33,501	0/1:21,0:21:27.60:28,0,530	0/0:20,0:20:21.05:0,21,297	0/0:6,0:11:6.01:0,6,56	1/1:17,0:28:54.02:756,54,0	1/1:15,13:33:39.13:899,39,0	1/1:23,0:23:6.02:95,6,0
chr10	53244242	.	CATCT	C	1180.68	PASS	AB=0.814;AC=7;AF=0.125;AN=56;BaseQRankSum=10.176;DP=705;FS=1.858;HRun=0;HaplotypeScore=183.7052;InbreedingCoeff=-0.1430;MQ=58.64;MQ0=1;MQRankSum=-8.455;QD=5.27;ReadPosRankSum=-5.289;VQSLOD=0.8631;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:96.26:0,96,2395	0/0:11,0:11:33.11:0,33,880	0/0:26,0:20:51.48:0,51,959	0/0:20,0:16:41.28:0,41,710	0/1:32,9:41:99:100,0,1198	0/1:20,8:28:99:232,0,1133	0/1:24,1:25:54.32:54,0,982	0/1:18,10:25:56.83:479,0,57	0/1:30,6:36:99:222,0,1592	0/0:33,0:33:93.31:0,93,2255	0/0:13,0:13:36.12:0,36,835	0/0:23,0:23:69.24:0,69,1738	0/0:18,0:18:51.15:0,51,1153	0/1:26,6:31:99:141,0,1443	0/0:24,0:24:72.21:0,72,1781	0/0:29,0:29:87.28:0,87,2136	0/0:12,0:12:24.07:0,24,550	0/0:13,0:13:30.06:0,30,635	0/0:20,0:19:57.17:0,57,1221	0/0:28,0:28:75.24:0,75,1913	0/0:18,0:18:51.17:0,51,1235	0/0:24,0:24:63.22:0,63,1603	0/0:28,0:28:81.26:0,81,2027	0/0:25,0:25:57.10:0,57,1430	0/1:20,13:33:83.50:84,0,1202	0/0:30,0:30:84.29:0,84,2127	0/0:36,0:36:90.31:0,90,2236	0/0:11,0:15:41.97:0,42,682
chr10	53244251	.	GTCTATCTA	G	1798.90	PASS	AB=1.000;AC=8;AF=0.143;AN=56;BaseQRankSum=11.476;DP=703;FS=2.478;HRun=0;HaplotypeScore=225.6148;InbreedingCoeff=0.1251;MQ=59.51;MQ0=0;MQRankSum=-9.469;QD=8.21;ReadPosRankSum=-5.693;VQSLOD=0.6744;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:93.15:0,93,3631	0/0:11,0:11:33.11:0,33,1377	0/0:28,0:21:32.71:0,33,833	0/0:16,0:13:27.05:0,27,787	0/1:38,0:38:41.46:41,0,2135	0/1:26,0:26:99:314,0,1862	0/1:23,0:23:16.30:16,0,1508	1/1:13,10:21:59.24:963,59,0	0/1:38,0:38:99:203,0,2713	0/0:33,0:33:87.29:0,87,3338	0/0:13,0:13:27.08:0,27,1046	0/0:25,0:25:69.24:0,69,2711	0/0:19,0:19:54.15:0,54,1902	0/1:38,0:36:99:209,0,2560	0/0:28,0:28:81.26:0,81,3134	0/0:31,0:31:90.27:0,90,3344	0/0:8,0:8:18.06:0,18,772	0/0:12,0:12:30.10:0,30,1029	0/0:18,0:17:45.13:0,45,1604	0/0:26,0:26:69.24:0,69,2964	0/0:21,0:21:42.13:0,42,1700	0/0:26,0:26:72.23:0,72,2656	0/0:27,0:27:78.25:0,78,3089	0/0:26,0:26:63.20:0,63,2369	0/1:33,0:33:99:195,0,1927	0/0:30,0:30:84.27:0,84,3290	0/0:36,0:36:87.25:0,87,3276	0/0:15,0:15:36.11:0,36,836
chr10	53244261	.	CTATCTATT	C	1932.91	PASS	AB=0.844;AC=7;AF=0.125;AN=56;BaseQRankSum=10.374;DP=692;FS=2.554;HRun=0;HaplotypeScore=216.5142;InbreedingCoeff=-0.1431;MQ=55.72;MQ0=1;MQRankSum=-9.662;QD=9.07;ReadPosRankSum=-0.460;VQSLOD=2.7877;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:94.16:0,94,3834	0/0:11,0:11:33.11:0,33,1462	0/0:20,0:11:30.05:0,30,659	0/0:12,0:8:20.86:0,21,729	0/1:26,9:35:99:120,0,2384	0/1:17,8:25:99:439,0,1921	0/1:21,1:22:21.78:22,0,1568	0/1:28,0:27:57.07:505,0,57	0/1:27,6:33:99:315,0,2818	0/0:31,0:31:90.25:0,90,3550	0/0:16,0:16:44.84:0,45,1211	0/0:26,0:26:78.24:0,78,2951	0/0:22,0:22:63.20:0,63,2213	0/1:32,7:37:99:295,0,2846	0/0:30,0:30:87.28:0,87,3508	0/0:35,0:35:99:0,102,3692	0/0:8,0:8:21.06:0,21,829	0/0:11,0:11:33.07:0,33,1093	0/0:19,0:18:48.16:0,48,1869	0/0:26,0:26:78.16:0,78,3127	0/0:20,0:20:42.14:0,42,1793	0/0:27,0:27:78.26:0,78,2858	0/0:28,0:28:81.26:0,81,3202	0/0:29,0:29:72.25:0,72,2631	0/1:18,13:31:99:369,0,1998	0/0:29,0:29:87.29:0,87,3539	0/0:32,0:32:81.24:0,81,3260	0/0:13,0:13:33.03:0,33,600
chr10	53244326	.	GTCTATCTA	G	978.72	PASS	AB=1.000;AC=10;AF=0.179;AN=56;BaseQRankSum=-0.670;DP=719;FS=0.000;HRun=0;HaplotypeScore=230.9107;InbreedingCoeff=0.0231;MQ=54.71;MQ0=19;MQRankSum=-1.975;QD=4.16;ReadPosRankSum=-7.401;VQSLOD=-0.5917;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:76.03:0,76,1883	0/0:14,0:14:39.07:0,39,920	0/0:24,0:7:14.95:0,15,181	0/1:31,0:10:2.31:2,0,112	0/1:28,0:26:12.63:13,0,212	0/1:26,0:23:14.99:15,0,355	0/1:21,0:21:28.49:28,0,129	1/1:6,32:36:89.69:841,90,0	0/1:27,0:27:28.01:28,0,191	0/0:35,0:35:87.34:0,87,1036	0/0:22,0:22:24.05:0,24,296	0/0:18,0:18:54.15:0,54,1384	0/0:26,0:26:72.20:0,72,1814	0/1:42,0:39:9.98:10,0,461	0/0:35,0:35:99:0,99,2537	0/0:27,0:27:75.23:0,75,2173	0/1:10,0:10:76.91:115,0,77	0/1:12,0:11:70.38:70,0,88	0/0:14,0:11:18.90:0,19,201	0/0:29,0:29:54.11:0,54,642	0/0:30,0:30:33.05:0,33,393	0/0:18,0:18:48.09:0,48,842	0/0:16,0:16:36.06:0,36,1010	0/0:31,0:31:57.16:0,57,1558	0/0:38,0:35:0.04:0,0,508	0/0:37,0:36:81.26:0,81,858	0/0:30,0:30:51.05:0,51,567	0/0:7,0:7:11.50:0,11,152
chr10	53244338	.	ATCTG	A	7929.29	PASS	AB=0.926;AC=25;AF=0.446;AN=56;BaseQRankSum=5.665;DP=718;FS=16.884;HRun=0;HaplotypeScore=161.5506;InbreedingCoeff=0.3115;MQ=54.50;MQ0=20;MQRankSum=2.150;QD=17.62;ReadPosRankSum=2.822;VQSLOD=3.6384;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:26.68:0,27,1282	0/0:12,0:12:33.06:0,33,677	0/0:18,0:7:14.74:0,15,119	0/0:32,0:10:1.35:0,1,72	0/1:29,2:29:79.16:79,0,272	0/1:17,7:21:99:376,0,110	0/1:19,1:20:99:270,0,129	0/1:37,0:35:92.35:92,0,354	0/1:29,0:29:35.13:35,0,235	1/1:3,34:37:95.10:1419,95,0	1/1:1,22:23:20.34:396,20,0	0/0:19,0:19:57.08:0,57,1052	0/0:25,0:25:74.95:0,75,1210	0/1:29,11:37:99:367,0,216	0/0:34,0:34:72.76:0,73,1624	0/0:27,0:27:81.11:0,81,1510	0/1:9,0:9:24.32:46,0,24	0/1:11,0:11:37.44:51,0,37	1/1:2,7:4:12.03:195,12,0	1/1:1,28:30:44.84:850,45,0	1/1:0,31:31:33.11:624,33,0	0/0:20,0:20:54.01:0,54,792	0/0:15,0:15:39.08:0,39,775	0/0:33,0:33:35.38:0,35,659	0/1:33,5:35:99:760,0,110	1/1:3,34:36:98.98:1384,99,0	1/1:1,26:27:38.75:737,39,0	1/1:2,14:15:15:246,15,0
chr10	53244342	.	G	GTCTA	1370.84	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=2.227;DP=726;FS=5.496;HRun=0;HaplotypeScore=186.2828;InbreedingCoeff=0.5127;MQ=54.47;MQ0=19;MQRankSum=0.443;QD=4.93;ReadPosRankSum=-4.436;VQSLOD=1.2153;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:33:52.71:0,53,780	0/0:10,0:10:24.08:0,24,377	0/0:22,0:11:18:0,18,202	0/0:30,0:8:7.27:0,7,93	0/0:30,0:28:1.61:0,2,4	1/1:27,0:24:20.29:163,20,0	1/1:22,0:22:14.87:62,15,0	0/0:38,0:37:42.03:0,42,578	0/0:29,0:29:11.92:0,12,109	0/1:35,0:35:37.15:37,0,249	0/1:22,0:22:3.91:4,0,73	0/0:20,0:20:39.10:0,39,570	0/0:26,0:26:39.12:0,39,592	1/1:41,0:38:26.81:247,27,0	0/0:34,0:35:60.15:0,60,862	0/0:27,0:27:54.15:0,54,806	0/1:9,0:9:17.15:17,0,80	0/1:12,0:11:39.62:40,0,94	0/0:9,0:4:8.99:0,9,74	0/0:30,0:30:20.90:0,21,277	0/0:31,0:31:17.83:0,18,203	0/0:19,0:19:33.10:0,33,492	0/0:15,0:15:30.07:0,30,427	1/1:16,21:37:21.07:502,21,0	1/1:39,0:36:33.95:390,34,0	0/1:34,0:33:90.79:91,0,215	0/0:28,0:28:23.39:0,23,260	0/0:16,0:15:11.98:0,12,99
chr10	53247828	.	A	AT	2284.32	PASS	AB=0.950;AC=13;AF=0.232;AN=56;BaseQRankSum=-11.010;DP=504;FS=1.485;HRun=10;HaplotypeScore=50.7955;InbreedingCoeff=0.8629;MQ=79.45;MQ0=0;MQRankSum=-3.595;QD=17.18;ReadPosRankSum=3.391;VQSLOD=3.9980;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:47.94:0,48,394	0/0:5,0:5:5.98:0,6,49	0/0:20,0:20:20.89:0,21,208	0/1:18,1:16:7.32:7,0,105	1/1:5,17:22:29.45:507,29,0	1/1:5,15:20:39.10:416,39,0	1/1:3,11:14:18.05:192,18,0	0/0:29,0:29:53.85:0,54,439	1/1:2,11:13:30.08:320,30,0	0/0:24,0:24:65.90:0,66,539	0/0:25,0:25:71.82:0,72,576	0/0:11,0:11:32.95:0,33,268	0/0:16,0:16:41.91:0,42,339	1/1:3,11:14:33.08:352,33,0	0/0:13,0:13:32.96:0,33,271	0/0:23,0:23:59.92:0,60,493	0/0:17,0:17:44.94:0,45,369	0/0:13,0:13:38.93:0,39,317	0/0:16,0:16:41.92:0,42,342	0/0:23,0:23:65.92:0,66,540	0/0:4,0:4:8.99:0,9,74	0/0:17,0:17:50.92:0,51,414	0/0:26,0:26:65.87:0,66,536	0/0:8,0:8:20.97:0,21,172	1/1:9,22:31:44.53:678,45,0	0/0:25,0:25:71.91:0,72,589	0/0:32,0:33:82.86:0,83,661	0/0:6,0:6:5.96:0,6,49
chr10	53249999	.	G	GC	16366.66	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=-17.440;DP=721;FS=1.912;HRun=1;HaplotypeScore=61.5568;InbreedingCoeff=0.9999;MQ=88.41;MQ0=0;MQRankSum=-4.782;QD=41.23;ReadPosRankSum=1.769;VQSLOD=5.4505;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,159,2048	0/0:14,0:14:42.14:0,42,545	0/0:23,0:23:69.21:0,69,861	0/0:27,0:27:72.12:0,72,882	1/1:2,31:33:93.31:1379,93,0	1/1:0,23:23:66.22:989,66,0	1/1:1,25:26:69.23:1034,69,0	0/0:27,0:27:75.23:0,75,950	1/1:0,17:17:39.13:584,39,0	1/1:1,30:31:90.29:1324,90,0	1/1:3,19:22:57.19:854,57,0	0/0:24,0:24:66.21:0,66,856	0/0:28,0:28:81.26:0,81,1051	1/1:0,28:29:81.27:1201,81,0	0/0:25,0:25:72.23:0,72,935	0/0:21,0:21:63.20:0,63,818	1/1:2,38:40:99:1618,108,0	1/1:1,11:12:33.11:495,33,0	1/1:1,22:23:69.23:1027,69,0	1/1:1,30:31:81.27:1213,81,0	1/1:0,25:25:69.23:1034,69,0	0/0:28,0:28:78.23:0,78,983	0/0:19,0:19:57.17:0,57,726	0/0:34,0:34:99:0,102,1305	1/1:0,33:33:99:1482,99,0	1/1:0,27:27:78.23:1145,78,0	1/1:0,15:15:36.12:539,36,0	1/1:0,10:10:30.10:449,30,0
chr10	53250418	.	ACT	A	7218.90	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=14.980;DP=774;FS=1.821;HRun=0;HaplotypeScore=93.9349;InbreedingCoeff=0.9991;MQ=92.00;MQ0=2;MQRankSum=-6.515;QD=36.09;ReadPosRankSum=1.365;VQSLOD=6.5379;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,108,1944	0/0:13,0:13:36.11:0,36,618	0/0:25,0:25:69.18:0,69,1138	0/0:40,0:39:92.24:0,92,1547	0/0:30,0:30:78.27:0,78,1405	0/0:20,0:20:54.19:0,54,973	0/0:25,0:25:75.24:0,75,1321	0/0:28,0:28:81.26:0,81,1379	0/0:33,0:33:96.33:0,96,1728	1/1:1,24:25:69.18:947,69,0	1/1:2,31:32:75.25:1050,75,0	0/0:30,0:30:84.29:0,84,1499	0/0:39,0:39:99:0,111,1969	0/0:32,0:32:93.32:0,93,1660	0/0:48,0:48:99:0,141,2463	0/0:28,0:28:81.26:0,81,1430	0/0:37,0:37:99:0,105,1825	0/0:10,0:10:27.09:0,27,486	1/1:0,18:17:51.16:699,51,0	1/1:0,21:21:63.21:882,63,0	1/1:4,35:39:96.32:1344,96,0	0/0:26,0:26:72.23:0,72,1267	0/0:21,0:21:60.21:0,60,1080	0/0:22,0:22:63.22:0,63,1107	0/0:27,0:27:75.23:0,75,1291	1/1:2,28:30:81.22:1079,81,0	1/1:1,25:26:66.22:924,66,0	1/1:0,8:8:21.07:294,21,0
chr10	53250824	.	TC	T	5029.88	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=12.233;DP=680;FS=4.636;HRun=6;HaplotypeScore=71.2079;InbreedingCoeff=0.9994;MQ=71.49;MQ0=4;MQRankSum=-0.367;QD=28.10;ReadPosRankSum=2.228;VQSLOD=5.6766;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:78.20:0,78,983	0/0:12,0:12:33.11:0,33,434	0/0:50,0:26:45.09:0,45,476	0/0:59,0:35:25.91:0,26,512	1/1:0,30:30:81.13:846,81,0	1/1:3,22:25:60.14:671,60,0	1/1:0,18:18:54.14:580,54,0	0/0:24,0:24:63.14:0,63,782	1/1:1,21:22:60.15:644,60,0	0/0:26,0:26:75.24:0,75,982	0/0:17,0:17:48.16:0,48,628	0/0:25,0:25:75.24:0,75,984	0/0:23,0:23:66.21:0,66,865	1/1:0,26:26:69.17:741,69,0	0/0:21,0:21:54.15:0,54,682	0/0:17,0:17:51.14:0,51,641	1/1:0,26:26:68.68:741,69,0	1/1:2,9:11:24.06:258,24,0	0/0:23,0:23:63.15:0,63,750	0/0:23,0:23:66.20:0,66,839	0/0:18,0:18:45.13:0,45,577	0/0:18,0:18:51.17:0,51,671	0/0:23,0:23:66.20:0,66,850	0/0:15,0:15:36.12:0,36,474	1/1:2,19:21:51.13:548,51,0	0/0:31,0:31:93.29:0,93,1200	0/0:30,0:30:84.20:0,84,1055	0/0:15,0:15:42.14:0,42,545
chr10	53251920	.	GCTT	G	6747.82	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=13.080;DP=715;FS=9.048;HRun=0;HaplotypeScore=141.6942;InbreedingCoeff=0.9994;MQ=87.04;MQ0=0;MQRankSum=-7.569;QD=34.96;ReadPosRankSum=2.833;VQSLOD=5.6637;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:84.28:0,84,1814	0/0:11,0:11:26.89:0,27,496	0/0:29,0:29:65.81:0,66,1310	0/0:27,0:28:72.08:0,72,1421	0/0:40,0:40:99:0,108,2144	0/0:14,0:14:33.11:0,33,728	0/0:33,0:33:90.31:0,90,1953	0/0:33,0:33:78.27:0,78,1709	0/0:23,0:23:69.23:0,69,1464	1/1:7,27:34:78.19:1196,78,0	1/1:0,23:23:51.17:817,51,0	0/0:19,0:19:54.12:0,54,1144	0/0:21,0:21:60.21:0,60,1318	0/0:30,0:30:84.29:0,84,1845	0/0:26,0:26:75.26:0,75,1640	0/0:30,0:30:81.27:0,81,1748	0/0:26,0:26:78.25:0,78,1678	0/0:14,0:14:39.13:0,39,861	1/1:5,24:29:69.16:1028,69,0	1/1:1,38:39:81.28:1299,81,0	1/1:2,17:19:27.09:433,27,0	0/0:31,0:31:84.05:0,84,1645	0/0:30,0:30:80.99:0,81,1592	0/0:20,0:20:54.18:0,54,1150	0/0:35,0:35:99:0,105,2132	1/1:1,20:21:60.20:963,60,0	1/1:3,15:18:36.12:578,36,0	1/1:0,10:10:27.09:433,27,0
chr10	53252799	.	T	TTCG	6205.35	PASS	AB=0.986;AC=51;AF=0.911;AN=56;BaseQRankSum=-5.035;DP=637;FS=7.406;HRun=0;HaplotypeScore=230.3048;InbreedingCoeff=-0.1000;MQ=52.22;MQ0=15;MQRankSum=-1.928;QD=9.74;ReadPosRankSum=3.747;VQSLOD=3.3931;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:22:39.86:182,0,40	1/1:10,0:10:11.28:94,11,0	0/1:39,0:18:43.41:43,0,360	0/1:33,0:14:36.36:36,0,266	1/1:18,0:18:18.56:89,19,0	1/1:24,0:20:17.18:87,17,0	1/1:18,0:16:30.33:203,30,0	1/1:34,0:29:41.57:467,42,0	1/1:20,0:18:28.10:199,28,0	1/1:15,6:25:28.76:434,29,0	1/1:18,1:19:4.34:162,4,0	1/1:23,0:23:34.04:246,34,0	1/1:27,0:27:45.72:227,46,0	1/1:33,0:32:43.13:300,43,0	1/1:27,0:26:42.35:293,42,0	1/1:27,0:24:55.51:362,56,0	1/1:21,0:17:33.82:274,34,0	1/1:15,0:12:15.95:147,16,0	1/1:10,4:11:15.11:326,15,0	1/1:20,2:25:20.74:275,21,0	1/1:12,19:32:8.90:176,9,0	0/1:10,0:10:3.49:85,0,3	1/1:11,0:11:11.86:54,12,0	1/1:21,0:19:38.70:287,39,0	1/1:31,0:31:12.79:112,13,0	0/1:24,2:22:1.54:528,0,2	1/1:10,8:17:7.75:93,8,0	1/1:4,6:11:19.62:423,20,0
chr10	53252800	.	T	TC	10614.82	PASS	AB=0.870;AC=48;AF=0.857;AN=56;BaseQRankSum=-10.016;DP=705;FS=1.089;HRun=0;HaplotypeScore=260.4308;InbreedingCoeff=-0.1610;MQ=49.48;MQ0=15;MQRankSum=0.208;QD=15.06;ReadPosRankSum=7.230;VQSLOD=4.7673;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:10,18:27:25.66:550,0,26	1/1:4,8:12:4.59:179,5,0	0/1:37,2:17:43.54:44,0,290	0/1:34,0:13:9.65:10,0,241	1/1:8,10:18:21.07:332,21,0	1/1:7,19:22:8.67:408,9,0	1/1:5,15:18:31.79:484,32,0	1/1:6,29:31:69.03:1035,69,0	1/1:4,16:18:43.63:713,44,0	0/1:23,2:25:46.23:149,0,46	1/1:17,3:21:3.22:72,3,0	1/1:5,21:25:24.82:557,25,0	1/1:4,24:28:50.96:768,51,0	1/1:6,30:35:48:771,48,0	1/1:7,24:30:40.25:671,40,0	1/1:4,26:27:56.04:945,56,0	1/1:1,19:16:35.66:567,36,0	1/1:4,11:12:12.70:290,13,0	0/1:17,1:14:16.38:154,0,16	0/1:33,4:35:1.59:71,0,2	1/1:27,3:30:3.76:50,4,0	1/1:11,4:16:5.85:97,6,0	1/1:13,8:21:12.88:227,13,0	1/1:1,20:19:41.97:634,42,0	1/1:22,16:38:16.32:484,16,0	0/1:24,7:28:99:143,0,115	0/1:12,4:15:6.62:24,0,7	1/1:9,2:11:13.63:186,14,0
chr10	53252813	.	G	GGT	2148.30	PASS	AB=0.904;AC=18;AF=0.321;AN=56;BaseQRankSum=4.795;DP=898;FS=25.412;HRun=0;HaplotypeScore=268.9197;InbreedingCoeff=0.1165;MQ=38.90;MQ0=28;MQRankSum=-6.263;QD=4.96;ReadPosRankSum=-1.443;VQSLOD=1.5312;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:29:23.83:0,24,250	0/0:8,0:9:2.63:0,3,35	0/0:56,0:17:6.13:0,6,106	0/0:58,0:12:8.81:0,9,60	0/0:29,0:30:14.83:0,15,149	0/1:32,0:28:86.26:86,0,213	0/0:22,0:20:9.46:0,9,120	0/0:45,0:39:13.31:0,13,502	0/0:21,0:21:20.95:0,21,214	0/1:35,1:37:37.76:472,0,38	0/1:17,8:25:3.08:3,0,23	0/0:29,0:29:24.23:0,24,221	0/0:33,0:33:2.51:0,3,253	0/0:31,0:31:9:0,9,135	0/1:37,1:38:40.18:40,0,146	0/0:35,0:32:25.15:0,25,324	1/1:16,0:17:6.01:56,6,0	1/1:11,1:10:17.54:174,18,0	0/1:25,2:21:10.62:275,0,11	0/1:40,3:45:6:125,0,6	0/1:30,6:33:33:33,0,97	0/1:22,1:24:43.55:44,0,107	0/0:30,0:35:16.55:0,17,143	0/0:18,0:16:26.83:0,27,264	0/1:46,0:51:79.86:80,0,239	0/1:34,5:39:44.40:605,0,44	1/1:13,2:17:19.68:201,20,0	1/1:9,0:11:9.03:127,9,0
chr10	53254953	.	T	TTTGG	6886.49	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-11.940;DP=681;FS=3.022;HRun=0;HaplotypeScore=111.2101;InbreedingCoeff=0.9863;MQ=69.30;MQ0=0;MQRankSum=-1.444;QD=45.61;ReadPosRankSum=0.892;VQSLOD=5.2185;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:57.07:0,57,922	0/0:6,0:6:15.05:0,15,250	0/0:38,0:34:27.10:0,27,534	0/0:26,0:23:38.62:0,39,583	1/1:11,18:29:45.15:1068,45,0	1/1:3,20:25:54.18:1256,54,0	1/1:9,7:17:21.07:518,21,0	0/0:35,0:35:57.19:0,57,916	1/1:6,22:29:66.23:1568,66,0	0/0:30,0:30:72.23:0,72,1144	0/0:18,0:18:48.16:0,48,795	0/0:19,0:19:57.18:0,57,926	0/0:29,0:29:63.22:0,63,1049	1/1:5,16:21:39.13:925,39,0	0/0:25,0:25:63.20:0,63,1019	0/0:26,0:26:66.23:0,66,1095	0/0:25,0:25:66.21:0,66,1076	0/0:21,0:22:53.68:0,54,888	0/0:12,0:12:15.05:0,15,250	0/0:30,0:30:75.25:0,75,1215	0/0:16,0:16:36.12:0,36,595	0/0:25,0:25:69.24:0,69,1145	0/0:29,0:29:75.25:0,75,1230	0/0:19,0:18:39.12:0,39,625	1/1:3,26:30:66.22:1551,66,0	0/0:32,0:32:72.25:0,72,1189	0/0:35,0:35:84.29:0,84,1394	0/0:5,0:5:12:0,12,170
chr10	53256114	.	ATT	A	5396.27	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=17.470;DP=677;FS=0.650;HRun=11;HaplotypeScore=101.3326;InbreedingCoeff=0.9981;MQ=73.21;MQ0=3;MQRankSum=-1.461;QD=23.36;ReadPosRankSum=6.275;VQSLOD=4.3563;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:51.13:0,51,757	0/0:10,0:11:29.59:0,30,418	0/0:14,0:16:23.97:0,24,308	0/0:8,0:9:17.89:0,18,241	0/0:26,0:29:77.74:0,78,1121	0/0:33,0:33:90.31:0,90,1378	0/0:23,0:24:50.65:0,51,728	0/0:34,0:38:99:0,101,1421	0/0:24,0:27:76.72:0,77,1085	1/1:2,25:27:75.18:798,75,0	1/1:2,16:17:33.91:353,34,0	0/0:24,0:25:72.23:0,72,1065	0/0:21,0:21:54.17:0,54,808	0/0:24,0:24:69.18:0,69,1009	0/0:26,0:28:71.21:0,71,1032	0/0:37,0:37:99:0,111,1688	1/1:2,0:32:74.10:323,74,0	1/1:1,0:12:27.44:120,27,0	1/1:3,14:17:42.09:447,42,0	1/1:2,24:27:65.86:682,66,0	1/1:0,18:17:42.11:447,42,0	0/0:24,0:24:69.22:0,69,1040	0/0:33,0:33:89.09:0,89,1291	0/0:20,0:21:60.16:0,60,844	0/0:25,0:27:75.24:0,75,1117	1/1:3,32:36:95.97:1002,96,0	1/1:2,30:32:86.94:906,87,0	1/1:0,11:11:30.08:319,30,0
chr10	53256949	.	C	CTGTG	497.08	PASS	AC=20;AF=0.435;AN=46;BaseQRankSum=1.457;DP=567;FS=0.000;HRun=0;HaplotypeScore=133.9423;InbreedingCoeff=0.4836;MQ=63.39;MQ0=16;MQRankSum=-0.566;QD=2.52;ReadPosRankSum=-2.901;VQSLOD=1.7982;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:26:6:0,6,68	0/0:11,0:11:5.99:0,6,70	./.	./.	1/1:20,3:21:3:69,3,0	1/1:23,0:21:8.99:198,9,0	1/1:31,0:30:5.92:87,6,0	./.	1/1:13,4:17:6.02:138,6,0	1/1:17,0:17:2.97:20,3,0	0/0:7,0:7:0:0,0,0	0/0:21,0:21:0.85:0,1,41	0/0:18,0:18:3:0,3,27	1/1:20,0:20:2.84:63,3,0	0/0:24,0:23:12.02:0,12,141	0/0:20,0:20:10.34:0,10,120	0/0:17,0:16:3.47:0,3,26	0/0:18,0:17:13.35:0,13,125	1/1:13,0:13:1.36:2,1,0	./.	./.	0/0:23,0:20:6.46:0,6,53	0/0:16,0:16:2.37:0,2,8	0/0:33,0:33:9.90:0,10,117	1/1:19,0:20:3.01:48,3,0	1/1:16,0:16:2.30:4,2,0	0/0:11,0:11:2.78:0,3,27	1/1:16,0:14:0.20:1,0,0
chr10	53257198	.	A	AG	11643.54	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-10.523;DP=672;FS=9.229;HRun=3;HaplotypeScore=64.3069;InbreedingCoeff=0.9920;MQ=84.11;MQ0=0;MQRankSum=-2.548;QD=36.05;ReadPosRankSum=2.345;VQSLOD=5.2257;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,113,1309	0/0:13,0:13:39.12:0,39,468	0/0:18,0:18:48.11:0,48,562	0/0:21,0:21:47.83:0,48,533	1/1:0,21:21:45.15:625,45,0	1/1:2,29:31:81.27:1124,81,0	1/1:0,26:26:72.24:1008,72,0	0/0:34,0:34:93.26:0,93,1091	1/1:0,15:15:36.12:504,36,0	1/1:5,23:28:72.20:984,72,0	1/1:0,19:19:51.17:709,51,0	0/0:16,0:16:48.15:0,48,576	0/0:27,0:27:75.22:0,75,889	1/1:1,25:26:69.18:943,69,0	0/0:35,0:35:99:0,99,1168	0/0:19,0:19:57.16:0,57,673	0/0:25,0:25:66.20:0,66,792	0/0:24,0:24:72.22:0,72,864	1/1:2,21:23:63.21:882,63,0	1/1:1,18:19:54.18:756,54,0	1/1:1,31:32:87.29:1218,87,0	0/0:29,0:29:81.23:0,81,958	0/0:18,0:18:51.16:0,51,612	0/0:32,0:31:87.24:0,87,1020	1/1:0,24:24:60.20:840,60,0	1/1:3,33:36:96.29:1302,96,0	1/1:0,18:18:44.96:622,45,0	1/1:1,4:4:9.03:126,9,0
chr10	53257839	.	T	TGGG	9269.10	PASS	AB=0.737;AC=30;AF=0.536;AN=56;BaseQRankSum=12.487;DP=621;FS=10.132;HRun=0;HaplotypeScore=155.4188;InbreedingCoeff=0.8179;MQ=54.82;MQ0=54;MQRankSum=-10.295;QD=28.88;ReadPosRankSum=8.369;VQSLOD=3.6550;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:34:88.06:0,88,1368	0/0:4,0:3:9.03:0,9,159	0/0:57,0:14:29.81:0,30,428	0/0:49,0:15:16.61:0,17,237	1/1:22,14:36:87.75:1328,88,0	1/1:14,5:15:36.10:551,36,0	1/1:15,7:20:21.26:496,21,0	0/0:33,0:31:76.86:0,77,1207	1/1:8,7:16:16.10:354,16,0	1/1:8,0:17:48.15:686,48,0	1/1:15,0:18:50.98:634,51,0	0/0:20,0:19:52.99:0,53,900	0/0:17,0:16:46.39:0,46,708	0/1:10,8:15:37.55:231,0,38	0/0:22,0:21:61.04:0,61,981	0/0:14,0:13:34.91:0,35,507	1/1:10,4:14:5.70:496,6,0	1/1:4,16:21:24.86:555,25,0	1/1:16,0:20:48.16:710,48,0	1/1:13,0:17:51.14:616,51,0	1/1:4,0:4:7.26:83,7,0	0/0:12,0:12:36.12:0,36,585	0/0:26,0:25:62.89:0,63,955	0/0:10,0:10:13.06:0,13,267	0/1:18,7:25:4.83:701,0,5	1/1:19,0:26:72.22:963,72,0	1/1:15,0:20:60.18:797,60,0	1/1:6,0:2:6.02:68,6,0
chr10	53257845	.	T	TGGG	2308.21	PASS	AB=0.942;AC=18;AF=0.321;AN=56;BaseQRankSum=8.268;DP=648;FS=26.235;HRun=0;HaplotypeScore=172.6695;InbreedingCoeff=-0.2001;MQ=49.13;MQ0=61;MQRankSum=-6.228;QD=7.02;ReadPosRankSum=4.973;VQSLOD=1.5127;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:35:91.54:0,92,1448	0/0:4,0:3:9.03:0,9,156	0/0:72,0:12:26.32:0,26,282	0/0:54,0:16:13.38:0,13,220	0/1:36,1:36:99:266,0,132	0/1:17,3:18:83:83,0,94	0/1:12,5:18:99:168,0,140	0/0:34,0:31:76.15:0,76,1194	0/1:14,0:14:39.60:238,0,40	0/1:18,0:16:65.67:66,0,175	0/1:20,0:18:17.92:140,0,18	0/0:19,0:18:51.17:0,51,851	0/0:18,0:17:47.44:0,47,727	0/1:18,0:15:53.50:192,0,53	0/0:21,0:20:60.20:0,60,1014	0/0:12,0:11:30.10:0,30,510	0/1:19,0:19:99:184,0,138	0/1:21,0:21:98.72:99,0,181	0/1:28,0:18:55.45:55,0,169	0/1:19,0:18:19.13:174,0,19	1/1:7,0:5:7.16:41,7,0	0/0:11,0:11:33.11:0,33,557	0/0:28,0:27:71.40:0,71,1138	0/0:8,0:8:7.41:0,7,157	0/1:16,6:29:99:360,0,126	0/1:27,0:25:94.78:224,0,95	0/1:23,0:20:83.67:144,0,84	1/1:7,0:2:5.95:42,6,0
chr10	53257846	.	T	TGGG	2011.74	PASS	AB=0.981;AC=18;AF=0.321;AN=56;BaseQRankSum=8.444;DP=645;FS=23.940;HRun=0;HaplotypeScore=169.3792;InbreedingCoeff=-0.2038;MQ=49.15;MQ0=61;MQRankSum=-7.635;QD=6.21;ReadPosRankSum=4.903;VQSLOD=0.8810;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:35:92.08:0,92,1397	0/0:4,0:3:9.03:0,9,154	0/0:73,0:12:25.60:0,26,266	0/0:56,0:17:14.45:0,14,225	0/1:35,1:35:99:203,0,242	0/1:21,0:17:19.92:20,0,149	0/1:19,0:17:89.65:90,0,210	0/0:34,0:31:79.80:0,80,1211	0/1:12,2:14:94.81:260,0,95	0/1:18,0:16:64.25:64,0,227	0/1:20,0:18:44.29:141,0,44	0/0:19,0:18:51.17:0,51,841	0/0:18,0:17:50.80:0,51,756	0/1:17,0:15:80.03:142,0,80	0/0:21,0:20:60.20:0,60,1020	0/0:12,0:11:30.10:0,30,508	0/1:19,0:19:99:213,0,173	0/1:21,0:21:98.14:98,0,227	0/1:26,0:16:59.99:60,0,183	0/1:19,0:18:45.42:172,0,45	1/1:7,0:5:6.80:40,7,0	0/0:11,0:11:33.11:0,33,556	0/0:28,0:27:71.61:0,72,1145	0/0:8,0:8:7.39:0,7,156	0/1:27,1:29:99:249,0,209	0/1:27,0:25:99:240,0,142	0/1:23,0:20:99:142,0,123	1/1:7,0:2:5.96:44,6,0
chr10	53258110	.	G	GGATA	6120.52	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-0.284;DP=703;FS=4.617;HRun=0;HaplotypeScore=118.1762;InbreedingCoeff=0.9933;MQ=67.59;MQ0=1;MQRankSum=-2.549;QD=41.64;ReadPosRankSum=2.886;VQSLOD=5.4496;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,105,1778	0/0:6,0:6:15.05:0,15,260	0/0:29,0:26:53.34:0,53,825	0/0:22,0:20:32.21:0,32,489	1/1:5,30:35:63.62:1481,64,0	1/1:4,20:24:42.14:1065,42,0	1/1:5,16:21:18.06:412,18,0	0/0:28,0:28:75.20:0,75,1105	1/1:4,14:19:33.11:836,33,0	0/0:26,0:26:66.20:0,66,1013	0/0:28,0:28:54.14:0,54,856	0/0:23,0:23:60.16:0,60,937	0/0:31,0:31:81.19:0,81,1240	1/1:2,17:19:39.13:957,39,0	0/0:31,0:31:87.23:0,87,1342	0/0:24,0:24:60.21:0,60,1034	0/0:27,0:27:75.23:0,75,1237	0/0:16,0:16:31.89:0,32,716	0/0:26,0:24:48.12:0,48,768	0/0:30,0:30:66.16:0,66,1051	0/0:40,0:40:93.26:0,93,1465	0/0:20,0:20:54.17:0,54,880	0/0:24,0:23:66.21:0,66,1100	0/0:32,0:32:84.28:0,84,1425	1/1:2,27:29:54.19:1369,54,0	0/0:25,0:25:57.18:0,57,939	0/0:24,0:24:69.20:0,69,1119	0/0:6,0:6:18.05:0,18,285
chr10	53258320	.	C	CT	5652.15	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-1.895;DP=599;FS=1.462;HRun=9;HaplotypeScore=69.8898;InbreedingCoeff=0.9906;MQ=77.88;MQ0=1;MQRankSum=0.911;QD=18.59;ReadPosRankSum=0.757;VQSLOD=5.0606;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:35.99:0,36,312	0/0:6,0:6:11.99:0,12,104	0/0:19,0:19:22.17:0,22,180	0/0:16,0:17:42.10:0,42,345	1/1:5,1:29:60.56:328,61,0	1/1:4,2:35:85.68:470,86,0	1/1:2,0:16:34.12:171,34,0	0/0:41,0:41:91.98:0,92,787	1/1:2,1:19:37.10:203,37,0	1/1:9,15:24:42.10:456,42,0	1/1:3,19:22:54.15:597,54,0	0/0:18,0:18:53.99:0,54,469	0/0:21,0:22:56.02:0,56,475	1/1:0,0:13:31.25:156,31,0	0/0:27,0:27:77.97:0,78,673	0/0:22,0:22:62.98:0,63,547	0/0:3,0:22:36.67:0,37,108	0/0:1,0:22:38.70:0,39,114	1/1:4,13:17:42.06:450,42,0	1/1:6,24:30:20.03:653,20,0	1/1:1,8:9:21.06:232,21,0	0/0:21,1:22:20.80:0,21,410	0/0:26,0:26:71.95:0,72,621	0/0:15,0:15:14.61:0,15,288	1/1:4,1:20:25.73:147,26,0	1/1:3,23:27:66.16:720,66,0	1/1:1,30:31:49.18:770,49,0	1/1:2,9:11:27.07:299,27,0
chr10	53259159	.	C	CAA	1838.45	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-5.686;DP=642;FS=1.192;HRun=8;HaplotypeScore=80.4424;InbreedingCoeff=0.9905;MQ=87.88;MQ0=1;MQRankSum=-2.856;QD=36.05;ReadPosRankSum=0.752;VQSLOD=3.5726;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:66.16:0,66,736	0/0:5,0:5:15.04:0,15,167	0/0:28,0:30:34.18:0,34,545	0/0:21,0:21:35.73:0,36,350	0/0:31,0:31:87.20:0,87,952	0/0:32,0:32:87.23:0,87,970	0/0:32,0:32:61.72:0,62,929	0/0:31,0:31:68.43:0,68,706	0/0:18,0:18:42.08:0,42,457	0/0:27,0:27:69.17:0,69,762	0/0:20,0:20:51.13:0,51,567	0/0:18,0:18:48.11:0,48,526	0/0:20,0:20:51.13:0,51,568	0/0:22,0:22:57.05:0,57,609	0/0:29,0:30:65.77:0,66,832	0/0:20,0:20:57.12:0,57,615	1/1:5,19:24:56.68:865,57,0	1/1:5,21:26:72.21:1095,72,0	0/0:19,0:19:54.10:0,54,588	0/0:25,0:25:72.16:0,72,782	0/0:27,0:27:69.16:0,69,759	0/0:24,0:24:72.18:0,72,793	0/0:24,0:24:66.17:0,66,736	0/0:14,0:14:39.09:0,39,425	0/0:12,0:12:33.09:0,33,367	0/0:17,0:17:45.11:0,45,502	0/0:38,0:38:99:0,102,1126	0/0:8,0:8:24.06:0,24,267
chr10	53263061	.	A	AAAAAAAAAG	3754.30	PASS	AB=1.000;AC=28;AF=0.519;AN=54;BaseQRankSum=0.699;DP=343;FS=53.901;HRun=0;HaplotypeScore=76.3143;InbreedingCoeff=0.5681;MQ=66.57;MQ0=17;MQRankSum=-4.756;QD=23.32;ReadPosRankSum=-3.495;VQSLOD=-0.3786;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:60.19:0,60,1523	0/0:6,0:5:15.05:0,15,361	0/0:36,0:19:34.91:0,35,358	0/0:25,0:10:24.66:0,25,453	1/1:7,1:5:5.99:49,6,0	1/1:12,2:10:24.07:749,24,0	1/1:3,1:3:9.03:418,9,0	1/1:7,6:22:44.97:825,45,0	./.	0/1:8,0:7:11.50:26,0,12	0/1:7,0:5:17.46:68,0,17	0/0:11,0:10:29.93:0,30,700	0/0:8,0:7:14.91:0,15,375	1/1:7,10:13:9.03:260,9,0	0/0:16,0:16:42.12:0,42,1077	0/0:11,0:11:30.10:0,30,795	1/1:13,0:9:6.92:104,7,0	1/1:8,0:6:4.91:28,5,0	0/1:17,0:13:28.17:107,0,28	0/1:4,0:4:12.63:71,0,13	1/1:2,0:2:6.02:94,6,0	0/0:11,0:10:27.08:0,27,724	0/0:11,0:11:33.07:0,33,751	0/0:14,0:14:25.98:0,26,630	1/1:9,4:10:24.05:718,24,0	1/1:11,0:7:6.49:112,6,0	1/1:3,0:1:3.01:54,3,0	1/1:5,0:5:3.01:72,3,0
chr10	53263141	.	GTTA	G	1319.98	PASS	AC=14;AF=0.269;AN=52;BaseQRankSum=1.442;DP=264;FS=3.543;HRun=0;HaplotypeScore=48.3237;InbreedingCoeff=0.7008;MQ=56.97;MQ0=0;MQRankSum=0.111;QD=14.67;ReadPosRankSum=-0.044;VQSLOD=3.0759;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:33.11:0,33,658	0/0:4,0:4:3.01:0,3,50	0/0:5,0:3:3.01:0,3,44	./.	1/1:3,10:13:21.07:292,21,0	1/1:4,16:20:42.14:585,42,0	1/1:5,1:6:9:104,9,0	1/1:18,0:30:20.33:134,20,0	1/1:3,3:6:12.04:167,12,0	0/0:2,0:2:2.97:0,3,20	./.	0/0:10,0:10:21.07:0,21,419	0/0:7,0:7:15.05:0,15,291	1/1:4,1:5:3.01:42,3,0	0/0:11,0:11:21.07:0,21,404	0/0:10,0:10:21.07:0,21,418	0/0:3,0:27:57.18:0,57,736	0/0:4,0:12:24.06:0,24,298	0/0:15,0:15:8.06:0,8,85	0/0:3,0:4:2.99:0,3,23	0/0:2,0:2:2.37:0,2,8	0/0:2,0:2:6.02:0,6,120	0/0:6,0:6:12.04:0,12,239	0/0:4,0:4:12.04:0,12,239	1/1:6,4:10:12.04:167,12,0	0/0:8,0:7:5.93:0,6,40	0/0:1,0:5:6.02:0,6,78	0/0:9,0:7:6.02:0,6,77
chr10	53265794	.	C	CTT	1004.42	PASS	AB=0.956;AC=8;AF=0.167;AN=48;BaseQRankSum=-2.345;DP=462;FS=0.476;HRun=3;HaplotypeScore=164.0968;InbreedingCoeff=-0.1700;MQ=47.67;MQ0=10;MQRankSum=4.541;QD=5.81;ReadPosRankSum=0.594;VQSLOD=-0.0514;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:29:66.25:0,66,1091	0/0:14,0:14:42.12:0,42,587	./.	./.	./.	0/0:6,0:6:5.32:0,5,12	0/0:4,0:4:3.54:0,4,9	./.	0/0:5,0:5:1.07:0,1,5	0/0:35,0:35:20.09:0,20,597	0/0:17,0:16:32.99:0,33,358	0/1:21,0:21:99:148,0,488	0/1:28,1:29:99:210,0,433	0/0:4,0:4:3.54:0,4,8	0/1:29,0:29:99:224,0,485	0/0:23,0:23:69.07:0,69,949	0/1:13,0:13:28.51:29,0,83	0/1:9,0:9:9.02:9,0,23	0/0:15,0:13:29.67:0,30,301	0/0:35,0:34:57.31:0,57,815	0/0:4,0:4:5.11:0,5,52	0/1:14,9:23:99:215,0,289	0/1:24,1:25:99:278,0,212	0/1:24,0:24:15.90:16,0,244	0/0:3,0:3:3.02:0,3,7	0/0:22,0:22:56.95:0,57,572	0/0:29,0:28:39.56:0,40,635	0/0:4,0:4:2.96:0,3,19
chr10	53265795	.	TC	T	799.19	PASS	AB=1.000;AC=11;AF=0.220;AN=50;BaseQRankSum=6.096;DP=460;FS=9.128;HRun=1;HaplotypeScore=148.5944;InbreedingCoeff=0.7299;MQ=47.55;MQ0=9;MQRankSum=-4.247;QD=18.59;ReadPosRankSum=-6.058;VQSLOD=1.2909;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:29:84.10:0,84,1256	0/0:14,0:14:42.14:0,42,652	0/0:1,0:1:2.97:0,3,20	./.	./.	1/1:0,6:6:18.06:250,18,0	1/1:0,4:4:12.04:166,12,0	./.	1/1:0,5:5:15.05:208,15,0	0/0:35,0:35:78.88:0,79,1045	0/0:17,0:16:32.71:0,33,499	0/0:21,0:21:57.66:0,58,737	0/0:29,0:29:73.35:0,73,798	1/1:0,4:4:12.04:166,12,0	0/0:29,0:29:55.15:0,55,795	0/0:23,0:23:69.23:0,69,1082	0/0:13,0:13:30.98:0,31,268	0/0:9,0:9:23.40:0,23,201	0/0:15,0:14:1.10:0,1,430	0/0:35,0:34:87.08:0,87,1197	0/0:4,0:4:6.02:0,6,81	0/1:21,0:21:44.91:45,0,429	0/0:25,0:25:67.67:0,68,660	0/0:24,0:24:29.94:0,30,433	1/1:0,3:3:9.03:125,9,0	0/0:21,0:21:63:0,63,820	0/0:29,0:28:73.66:0,74,1002	0/0:4,0:4:6.02:0,6,76
chr10	53265796	.	CTCTCTCTCTCTCTCTCTCTTTCTT	C	3667.90	PASS	AB=0.931;AC=19;AF=0.352;AN=54;BaseQRankSum=5.870;DP=462;FS=1.633;HRun=0;HaplotypeScore=340.9376;InbreedingCoeff=0.3928;MQ=47.36;MQ0=9;MQRankSum=-3.506;QD=22.37;ReadPosRankSum=-8.136;VQSLOD=-0.0436;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:28:78.20:0,78,5483	0/0:14,0:14:42.14:0,42,3034	0/0:1,0:1:3.01:0,3,142	./.	0/1:1,14:15:0.06:167,0,0	1/1:6,0:6:18.06:633,18,0	1/1:4,0:4:12.04:417,12,0	1/1:4,15:15:45.10:730,45,0	1/1:5,0:5:15.05:536,15,0	0/0:34,0:34:3.29:0,3,1616	0/1:19,0:18:84.52:85,0,584	0/0:21,0:21:60.20:0,60,3519	0/0:29,0:29:72.20:0,72,4573	1/1:4,0:4:12.04:416,12,0	0/0:29,0:29:75.24:0,75,4694	0/0:23,0:23:69.22:0,69,4473	0/1:11,0:13:80.64:81,0,543	0/1:8,0:9:99:210,0,211	0/0:17,0:16:39.07:0,39,1404	0/1:34,0:33:7.21:7,0,2067	0/1:4,0:4:31.65:32,0,68	0/0:20,0:20:38.71:0,39,3035	0/0:25,0:25:69.17:0,69,4189	0/0:25,0:25:33.11:0,33,2281	1/1:3,0:3:9.03:304,9,0	0/0:22,0:22:30.33:0,30,1254	0/1:29,0:28:50.43:50,0,1797	0/0:4,0:4:1.92:0,2,78
chr10	53274680	.	CT	C	1131.81	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.609;DP=674;FS=1.412;HRun=3;HaplotypeScore=62.1866;InbreedingCoeff=0.9969;MQ=72.57;MQ0=0;MQRankSum=1.427;QD=32.34;ReadPosRankSum=-4.034;VQSLOD=2.1047;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,154,2198	0/0:11,0:11:33.11:0,33,475	0/0:10,0:10:30.10:0,30,412	0/0:9,0:9:24.04:0,24,306	0/0:27,0:27:81.23:0,81,1142	0/0:33,0:33:99:0,99,1407	0/0:24,0:24:69.23:0,69,992	1/1:2,33:35:99:1227,99,0	0/0:25,0:25:72.24:0,72,1036	0/0:21,0:21:63.20:0,63,890	0/0:21,0:21:63.19:0,63,874	0/0:24,0:24:69.23:0,69,992	0/0:27,0:27:75.20:0,75,1037	0/0:33,0:33:96.32:0,96,1382	0/0:40,0:40:99:0,120,1709	0/0:21,0:21:63.21:0,63,907	0/0:22,0:22:60.20:0,60,862	0/0:16,0:16:45.12:0,45,624	0/0:25,0:25:72.24:0,72,1037	0/0:20,0:20:54.18:0,54,777	0/0:19,0:19:57.19:0,57,821	0/0:21,0:21:63.21:0,63,901	0/0:19,0:19:54.18:0,54,777	0/0:14,0:14:42.14:0,42,604	0/0:23,0:22:66.22:0,66,951	0/0:31,0:31:90.30:0,90,1296	0/0:40,0:40:99:0,117,1683	0/0:11,0:11:33.11:0,33,475
chr10	53275037	.	TA	T	4056.38	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=5.424;DP=580;FS=3.069;HRun=9;HaplotypeScore=65.5421;InbreedingCoeff=0.9904;MQ=80.52;MQ0=0;MQRankSum=-0.515;QD=23.18;ReadPosRankSum=1.249;VQSLOD=4.6644;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:54.16:0,54,623	0/0:11,0:11:33.10:0,33,381	0/0:18,0:18:23.58:0,24,386	0/0:15,0:15:27.06:0,27,285	0/0:21,0:21:54.15:0,54,614	0/0:25,0:25:66.20:0,66,762	0/0:15,1:16:11.65:0,12,388	0/0:34,0:34:96.27:0,96,1092	0/0:15,0:15:39.12:0,39,450	1/1:3,30:33:90.05:824,90,0	1/1:3,18:21:51.02:467,51,0	0/0:20,0:20:48.14:0,48,554	0/0:25,0:25:72.21:0,72,831	0/0:31,0:31:90.27:0,90,1039	0/0:26,0:26:78.22:0,78,891	0/0:26,1:27:47.73:0,48,786	0/0:6,0:18:37.23:0,37,208	0/0:2,0:12:26.81:0,27,133	1/1:2,13:15:39.02:357,39,0	1/1:6,26:32:72.02:659,72,0	1/1:1,6:7:18.01:165,18,0	0/0:22,0:22:54.16:0,54,622	0/0:17,0:17:48.14:0,48,554	0/0:12,0:13:30.08:0,30,338	0/0:18,1:19:23.68:0,24,527	1/1:4,17:21:51.03:467,51,0	1/1:4,35:39:99:961,105,0	1/1:1,6:7:17.97:157,18,0
chr10	53276740	.	T	TTCTC	358.60	PASS	AB=0.986;AC=14;AF=0.304;AN=46;BaseQRankSum=-2.011;DP=667;FS=0.000;HRun=0;HaplotypeScore=151.7640;InbreedingCoeff=0.3483;MQ=60.96;MQ0=26;MQRankSum=0.508;QD=1.36;ReadPosRankSum=-0.127;VQSLOD=2.6003;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:37:5.58:0,6,73	0/0:18,0:17:2.95:0,3,28	./.	./.	0/1:30,0:30:0:0,0,0	0/0:23,0:24:2.90:0,3,28	0/0:14,0:14:5.96:0,6,55	0/1:32,0:31:0:0,0,0	0/0:23,0:23:9.52:0,10,159	./.	0/0:20,0:20:14.99:0,15,148	1/1:31,0:31:5.81:48,6,0	1/1:26,0:26:2.99:24,3,0	0/0:17,0:18:5.94:0,6,46	1/1:30,0:30:8.88:107,9,0	1/1:22,8:30:12.04:261,12,0	0/0:15,0:17:12.01:0,12,112	0/1:14,0:17:21.90:24,0,22	./.	./.	0/0:14,0:14:2.99:0,3,24	0/0:25,0:25:2.79:0,3,28	0/1:20,0:20:0:0,0,0	0/1:30,0:33:19.18:19,0,98	0/0:22,0:22:6.01:0,6,69	0/0:30,0:29:3:0,3,28	0/0:14,0:16:11.95:0,12,102	0/1:12,0:11:0:0,0,0
chr10	53276990	.	ACTGTAAAT	A	17534.60	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=16.387;DP=547;FS=0.000;HRun=0;HaplotypeScore=157.8889;InbreedingCoeff=0.9979;MQ=76.07;MQ0=0;MQRankSum=-17.506;QD=61.52;ReadPosRankSum=1.789;VQSLOD=4.5789;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:75.26:0,75,3164	0/0:12,0:12:36.12:0,36,1549	0/0:13,0:14:36.12:0,36,1390	0/0:17,0:17:30.10:0,30,1217	1/1:0,23:23:48.16:1301,48,0	1/1:0,24:24:72.25:1951,72,0	1/1:2,9:11:24.04:589,24,0	1/1:8,19:27:57.17:1412,57,0	1/1:3,14:17:42.14:1138,42,0	1/1:3,15:18:42.14:1091,42,0	1/1:4,11:15:27.09:732,27,0	0/0:25,0:25:72.25:0,72,3095	0/0:25,0:25:66.23:0,66,2693	1/1:4,19:23:51.18:1382,51,0	0/0:28,0:28:75.26:0,75,3236	0/0:20,0:20:54.19:0,54,2299	0/0:27,0:27:72.25:0,72,3049	0/0:11,0:11:27.09:0,27,1165	1/1:10,11:21:33.11:866,33,0	1/1:2,25:27:75.26:2031,75,0	1/1:4,11:15:18.06:488,18,0	0/0:20,0:20:57.20:0,57,2385	0/0:18,0:18:45.15:0,45,1941	0/0:19,0:19:54.19:0,54,2329	1/1:0,13:13:36.12:976,36,0	1/1:0,13:13:39.13:1057,39,0	1/1:5,25:30:69.24:1870,69,0	1/1:0,8:8:24.08:651,24,0
chr10	53277509	.	GAA	G	2192.28	PASS	AB=0.698;AC=31;AF=0.554;AN=56;BaseQRankSum=8.547;DP=507;FS=21.151;HRun=16;HaplotypeScore=92.7830;InbreedingCoeff=0.6317;MQ=61.05;MQ0=4;MQRankSum=-4.408;QD=8.03;ReadPosRankSum=3.999;VQSLOD=0.0213;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,2:30:34.24:0,34,576	0/1:7,1:9:16.05:16,0,176	0/0:17,0:9:5.89:0,6,37	0/0:14,0:8:4.83:0,5,44	1/1:7,0:13:19.17:81,19,0	1/1:8,0:13:17.17:68,17,0	1/1:6,0:14:26.98:113,27,0	1/1:24,0:28:40.70:184,41,0	0/1:7,0:14:6.42:68,0,6	0/1:9,15:27:6.08:336,0,6	1/1:9,9:21:14.40:278,14,0	0/0:24,0:26:53.42:0,53,583	0/0:25,1:28:34.11:0,34,604	1/1:4,0:8:13.70:60,14,0	0/0:29,0:31:59.52:0,60,716	0/0:18,0:27:50.40:0,50,571	1/1:6,0:26:24.64:105,25,0	1/1:4,0:14:11.40:47,11,0	1/1:9,6:15:29.02:246,29,0	0/1:9,4:14:30.73:115,0,31	1/1:5,2:5:8.09:54,8,0	0/0:12,0:18:44.08:0,44,436	0/0:20,0:22:43.79:0,44,480	0/0:16,1:19:18.74:0,19,420	1/1:7,0:13:30.46:134,30,0	0/1:7,6:14:2.94:162,0,3	1/1:4,6:12:26.09:190,26,0	1/1:7,3:10:16.80:140,17,0
chr10	53277522	.	A	AC	202.79	PASS	AB=0.895;AC=6;AF=0.107;AN=56;BaseQRankSum=0.340;DP=557;FS=5.930;HRun=0;HaplotypeScore=115.5108;InbreedingCoeff=-0.1084;MQ=53.60;MQ0=5;MQRankSum=1.561;QD=1.75;ReadPosRankSum=-1.865;VQSLOD=1.9841;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:81.61:0,82,750	0/0:7,0:7:20.52:0,21,229	0/1:20,0:3:0.11:0,0,21	0/0:20,0:8:9.40:0,9,67	0/1:10,3:13:49.54:50,0,84	0/1:15,1:16:2.17:2,0,115	0/0:15,2:17:1.66:0,2,190	0/1:20,10:30:99:186,0,152	0/0:14,0:14:28.12:0,28,222	0/0:27,0:27:71.63:0,72,496	0/0:19,0:19:50.24:0,50,297	0/0:23,0:23:58.52:0,59,598	0/0:23,0:23:56.02:0,56,567	0/0:13,0:13:30.14:0,30,242	0/0:28,0:28:76.58:0,77,815	0/0:29,0:29:55.44:0,55,631	0/0:31,0:30:55.59:0,56,375	0/0:20,0:20:37.18:0,37,266	0/0:21,1:21:15.13:0,15,302	0/0:19,0:19:49.64:0,50,360	0/0:10,0:8:14.93:0,15,90	0/0:18,0:18:47.27:0,47,387	0/0:25,0:24:61.25:0,61,626	0/0:19,0:18:48.28:0,48,499	0/1:16,3:19:63.85:64,0,181	0/0:15,0:15:39.49:0,39,271	0/1:18,0:17:6.27:6,0,203	0/0:11,0:11:15.52:0,16,160
chr10	53277549	.	CAA	C	2603.39	PASS	AB=0.678;AC=16;AF=0.286;AN=56;BaseQRankSum=6.682;DP=568;FS=0.894;HRun=11;HaplotypeScore=118.7248;InbreedingCoeff=0.8097;MQ=59.15;MQ0=7;MQRankSum=-6.033;QD=16.58;ReadPosRankSum=2.914;VQSLOD=2.4542;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:30:71.65:0,72,974	0/1:9,1:12:5.33:5,0,296	0/0:25,0:11:30.37:0,30,299	0/0:18,0:6:8.76:0,9,85	1/1:6,5:11:8.99:96,9,0	1/1:1,14:16:32.82:330,33,0	1/1:8,10:18:24.01:255,24,0	1/1:4,30:34:86.88:894,87,0	1/1:2,16:18:45.09:478,45,0	0/0:10,0:26:46.78:0,47,248	0/1:3,1:15:18.06:18,0,52	0/0:23,0:24:59.66:0,60,813	0/0:22,0:22:60.16:0,60,853	1/1:1,19:20:48.08:501,48,0	0/0:23,0:23:54.15:0,54,760	0/0:33,0:33:75.20:0,75,1041	0/0:31,0:29:57.13:0,57,811	0/0:16,0:16:42.13:0,42,625	0/0:9,0:24:42.75:0,43,170	0/0:6,0:19:35.19:0,35,168	0/0:1,0:7:15.94:0,16,79	0/0:19,0:19:48.14:0,48,693	0/0:18,0:17:45.12:0,45,617	0/0:21,0:22:56.59:0,57,723	1/1:3,10:13:21.03:223,21,0	0/0:4,0:15:33.80:0,34,170	0/0:4,1:20:7.95:0,8,105	0/0:1,0:11:24.95:0,25,86
chr10	53277904	.	T	TACCACCACCACC	4349.81	PASS	AB=1.000;AC=31;AF=0.554;AN=56;BaseQRankSum=1.657;DP=436;FS=31.994;HRun=0;HaplotypeScore=147.7108;InbreedingCoeff=0.7757;MQ=72.39;MQ0=6;MQRankSum=-5.813;QD=21.86;ReadPosRankSum=-4.230;VQSLOD=1.2745;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:50.14:0,50,1442	0/0:12,0:12:12.02:0,12,291	0/0:26,0:23:17.98:0,18,288	0/0:26,0:23:6.01:0,6,66	1/1:5,0:5:3.01:162,3,0	1/1:10,0:9:9.03:187,9,0	1/1:21,0:19:24.94:437,25,0	1/1:16,0:15:10.80:149,11,0	1/1:8,0:8:6.01:190,6,0	1/1:6,9:16:24.03:610,24,0	1/1:9,0:9:9.86:244,10,0	0/0:34,0:34:60.18:0,60,1782	0/0:25,0:25:51.16:0,51,1367	1/1:14,0:28:9.97:277,10,0	0/0:25,0:25:45.12:0,45,1355	0/0:22,0:21:35.98:0,36,852	0/0:13,0:13:36.06:0,36,916	0/0:7,0:7:12.04:0,12,375	1/1:10,3:14:16.23:430,16,0	1/1:4,7:11:6.02:227,6,0	1/1:18,0:17:8.97:214,9,0	0/0:10,0:10:12.04:0,12,323	0/0:12,0:12:14.85:0,15,414	0/1:10,0:10:61.76:62,0,515	1/1:13,0:11:9.03:366,9,0	1/1:4,0:4:8.98:124,9,0	1/1:12,0:12:15.04:319,15,0	1/1:2,2:4:6.02:351,6,0
chr10	53277933	.	C	CCACCACCACCACCAT	3663.30	PASS	AB=1.000;AC=20;AF=0.357;AN=56;BaseQRankSum=1.577;DP=447;FS=28.354;HRun=0;HaplotypeScore=159.3869;InbreedingCoeff=0.3039;MQ=52.77;MQ0=12;MQRankSum=-4.942;QD=19.18;ReadPosRankSum=-0.776;VQSLOD=0.8390;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:77.64:0,78,2156	0/0:7,0:7:21.04:0,21,452	0/0:15,0:8:20.96:0,21,311	0/0:14,0:9:11.13:0,11,141	1/1:1,2:7:3.01:222,3,0	1/1:15,0:13:32.87:368,33,0	1/1:19,0:17:36.88:548,37,0	0/1:14,0:13:99:118,0,149	1/1:4,0:13:6.40:44,6,0	0/1:16,0:15:99:428,0,200	0/1:7,0:7:33.05:33,0,75	0/0:28,0:28:56.17:0,56,2294	0/0:29,0:29:81.15:0,81,1847	1/1:19,1:20:15.22:307,15,0	0/0:23,0:23:69.14:0,69,1922	0/0:22,0:21:63.06:0,63,1292	0/0:20,0:20:36.05:0,36,1326	0/0:6,0:6:18.03:0,18,539	0/1:21,0:20:99:275,0,206	0/1:10,0:10:76.67:166,0,77	0/1:18,0:18:99:193,0,120	0/0:14,0:14:38.99:0,39,599	0/0:17,0:16:35.01:0,35,671	0/0:14,0:14:36.03:0,36,819	1/1:3,7:13:9.03:487,9,0	0/0:7,0:6:7.96:0,8,81	0/1:12,0:12:65.96:218,0,66	0/1:3,0:3:14.91:256,0,15
chr10	53278399	.	TTCTC	T	8619.24	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=14.486;DP=726;FS=1.056;HRun=0;HaplotypeScore=123.5288;InbreedingCoeff=0.9896;MQ=74.90;MQ0=0;MQRankSum=-6.888;QD=46.84;ReadPosRankSum=1.420;VQSLOD=5.7078;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,117,3088	0/0:7,0:7:21.07:0,21,560	0/0:22,0:22:42.56:0,43,1426	0/0:20,0:20:57.15:0,57,1408	0/0:28,0:28:78.25:0,78,1994	0/0:30,0:30:87.28:0,87,2254	0/0:31,0:31:93.32:0,93,2480	0/0:36,0:36:93.32:0,93,2428	0/0:23,0:23:66.21:0,66,1696	1/1:3,16:19:48.14:816,48,0	1/1:1,22:23:60.21:1105,60,0	0/0:33,0:33:96.29:0,96,2486	0/0:25,0:25:66.23:0,66,1756	0/0:39,0:39:99:0,117,3048	0/0:39,0:39:99:0,108,2767	0/0:34,0:34:99:0,102,2720	0/0:32,0:32:96.33:0,96,2521	0/0:18,0:18:51.18:0,51,1343	1/1:3,18:21:54.18:1007,54,0	1/1:1,24:25:69.24:1282,69,0	1/1:1,32:33:69.24:1283,69,0	0/0:19,0:19:57.20:0,57,1490	0/0:26,0:26:75.26:0,75,1998	0/0:20,0:20:57.20:0,57,1520	0/0:20,0:20:54.19:0,54,1439	1/1:1,28:29:84.25:1503,84,0	1/1:1,29:30:78.27:1455,78,0	1/1:0,4:4:9.03:168,9,0
chr10	53279799	.	CA	C	8284.05	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=11.248;DP=484;FS=0.000;HRun=7;HaplotypeScore=49.5448;InbreedingCoeff=0.9984;MQ=75.26;MQ0=0;MQRankSum=-2.935;QD=27.52;ReadPosRankSum=-1.528;VQSLOD=4.6692;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:63.20:0,63,793	0/0:8,0:8:24.08:0,24,302	0/0:13,0:13:35.44:0,35,373	0/0:11,0:11:23.86:0,24,265	1/1:2,21:23:60.13:612,60,0	1/1:1,16:17:42.09:428,42,0	1/1:0,13:13:39.09:398,39,0	1/1:5,24:29:72.14:727,72,0	1/1:0,18:18:54.12:550,54,0	1/1:2,26:28:81.18:826,81,0	1/1:2,19:21:48.10:490,48,0	0/0:11,0:11:30.10:0,30,377	0/0:15,0:15:42.13:0,42,528	1/1:0,16:16:48.11:490,48,0	0/0:17,0:17:51.16:0,51,642	0/0:16,0:15:48.15:0,48,603	0/0:14,0:14:36.12:0,36,453	0/0:15,0:14:42.08:0,42,497	1/1:2,12:14:36.08:366,36,0	1/1:0,21:21:60.13:612,60,0	1/1:0,11:11:30.07:306,30,0	0/0:10,0:10:27.08:0,27,328	0/0:20,0:20:54.17:0,54,679	0/0:8,0:8:21.07:0,21,264	1/1:2,23:25:66.15:673,66,0	1/1:3,17:20:51.11:520,51,0	1/1:0,35:35:99:1010,99,0	1/1:1,9:10:27.06:275,27,0
chr10	53280473	.	G	GA	9917.52	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-16.282;DP=659;FS=8.244;HRun=8;HaplotypeScore=64.4477;InbreedingCoeff=0.9721;MQ=82.21;MQ0=0;MQRankSum=-0.974;QD=28.17;ReadPosRankSum=0.702;VQSLOD=5.2558;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,102,917	0/0:9,0:9:27.01:0,27,247	0/0:23,0:23:45:0,45,406	0/0:23,0:24:52.42:0,52,468	1/1:2,23:25:66.20:762,66,0	1/1:2,24:25:69.21:796,69,0	1/1:7,19:27:29.55:576,30,0	1/1:7,28:36:90.18:984,90,0	1/1:3,26:29:66.20:762,66,0	1/1:4,17:20:51.12:570,51,0	1/1:4,21:25:63.19:725,63,0	0/0:26,0:26:68.99:0,69,620	0/0:18,0:18:48:0,48,433	1/1:4,20:24:60.16:681,60,0	0/0:21,0:20:53.99:0,54,486	0/0:26,1:27:34.41:0,34,569	0/0:33,0:33:93.01:0,93,844	0/0:17,0:17:44.98:0,45,404	1/1:4,29:34:90.08:1007,90,0	1/1:3,15:18:45.06:491,45,0	1/1:0,9:9:24.07:277,24,0	0/0:22,0:22:60.01:0,60,545	0/0:19,0:19:44.07:0,44,403	0/0:28,0:28:81.04:0,81,741	1/1:4,20:24:57.17:658,57,0	1/1:1,25:26:75.21:854,75,0	1/1:2,19:21:2.25:534,2,0	1/1:0,7:7:21.06:242,21,0
chr10	53285934	.	T	TTCCTCCTCC	1722.88	PASS	AB=0.988;AC=19;AF=0.380;AN=50;BaseQRankSum=-1.204;DP=315;FS=0.694;HRun=0;HaplotypeScore=100.5604;InbreedingCoeff=0.5244;MQ=41.06;MQ0=22;MQRankSum=-3.318;QD=11.96;ReadPosRankSum=-1.639;VQSLOD=2.0977;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:15,0:13:4.74:5,0,432	0/0:2,0:2:2.94:0,3,18	./.	./.	0/0:18,0:17:26.89:0,27,342	0/0:7,0:6:11.99:0,12,188	0/0:13,0:11:24:0,24,345	0/1:20,0:18:1.67:2,0,67	0/0:13,0:13:23.55:0,24,312	1/1:13,2:14:21.48:269,21,0	1/1:9,1:8:8.86:121,9,0	0/0:15,0:15:36.07:0,36,579	0/0:11,0:11:27.07:0,27,411	0/0:8,0:8:18.03:0,18,239	0/1:15,0:15:5.39:5,0,521	0/0:12,0:12:27.09:0,27,583	0/1:10,0:9:4.04:221,0,4	1/1:5,0:5:5.99:132,6,0	1/1:10,0:5:8.94:84,9,0	1/1:1,8:10:5.95:162,6,0	0/0:9,0:3:0:0,0,1	0/0:11,0:11:26.86:0,27,449	0/0:18,0:16:39.10:0,39,640	0/1:14,0:14:57.31:57,0,314	0/0:16,0:16:46.64:0,47,666	1/1:3,9:11:24.08:689,24,0	./.	1/1:3,4:5:3.01:144,3,0
chr10	53286025	.	T	TTCC	1395.39	PASS	AB=0.750;AC=17;AF=0.327;AN=52;BaseQRankSum=3.442;DP=205;FS=9.151;HRun=0;HaplotypeScore=44.5947;InbreedingCoeff=0.6557;MQ=33.70;MQ0=6;MQRankSum=-4.436;QD=17.66;ReadPosRankSum=0.435;VQSLOD=1.9566;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:15.04:0,15,203	0/0:1,0:1:3.01:0,3,48	./.	./.	0/0:8,0:8:15.05:0,15,222	0/0:10,0:10:8.99:0,9,248	0/0:7,0:7:11.96:0,12,135	0/0:18,0:14:18.85:0,19,182	0/0:4,0:4:10.82:0,11,110	1/1:13,6:14:36.12:681,36,0	1/1:6,4:9:14.98:215,15,0	0/0:6,0:6:12.02:0,12,152	0/0:6,0:6:12.04:0,12,174	0/0:7,0:7:9.01:0,9,107	0/0:7,0:7:15.04:0,15,185	0/0:8,0:8:15.03:0,15,194	1/1:1,4:4:6.02:131,6,0	1/1:1,0:1:1.82:5,2,0	0/1:6,3:4:11.43:140,0,11	1/1:5,5:8:8.99:189,9,0	1/1:4,1:4:3.90:68,4,0	0/0:5,0:5:8.99:0,9,115	0/0:9,0:9:21.07:0,21,328	0/0:5,0:5:15.03:0,15,197	0/0:6,0:6:15.04:0,15,199	1/1:9,2:6:2.95:82,3,0	1/1:7,2:6:5.75:52,6,0	0/0:1,0:1:3.01:0,3,40
chr10	53286069	.	CCTCCTT	C	2412.56	PASS	AB=0.766;AC=10;AF=0.179;AN=56;BaseQRankSum=4.694;DP=466;FS=16.023;HRun=0;HaplotypeScore=97.0364;InbreedingCoeff=-0.0544;MQ=36.17;MQ0=41;MQRankSum=-4.878;QD=14.11;ReadPosRankSum=0.601;VQSLOD=1.7991;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:20:45.11:0,45,856	0/0:8,0:8:21.07:0,21,524	0/0:18,0:3:9.03:0,9,111	0/0:27,0:3:8.58:0,9,117	0/0:15,0:15:32.99:0,33,503	0/0:22,0:21:48.10:0,48,1107	0/0:21,0:21:47.94:0,48,1089	1/1:20,0:9:2.92:61,3,0	0/0:12,0:12:30.09:0,30,856	0/1:17,9:22:99:386,0,755	0/1:6,9:14:99:277,0,156	0/0:12,0:12:32.94:0,33,606	0/0:14,0:14:33.11:0,33,788	0/0:15,0:13:10.23:0,10,654	0/0:19,0:17:36.08:0,36,700	0/0:17,0:16:36.09:0,36,962	0/1:20,0:19:99:124,0,214	0/0:8,0:7:21.02:0,21,267	0/1:15,4:11:99:280,0,217	0/1:11,6:14:99:448,0,152	0/1:13,3:10:99:185,0,172	0/0:9,0:9:15.01:0,15,374	0/0:12,0:10:21.03:0,21,515	0/0:24,0:23:31.79:0,32,1218	0/0:18,0:17:42.06:0,42,1087	0/1:9,10:12:99:329,0,140	0/1:10,8:14:10.46:464,0,10	0/0:2,0:1:3:0,3,29
chr10	53286072	.	CCTT	C	842.53	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=6.097;DP=477;FS=13.656;HRun=0;HaplotypeScore=87.4202;InbreedingCoeff=0.0168;MQ=36.85;MQ0=39;MQRankSum=-4.030;QD=4.41;ReadPosRankSum=-0.951;VQSLOD=0.7553;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:21:48.08:0,48,803	0/0:8,0:8:21.06:0,21,400	0/0:19,0:3:8.96:0,9,115	0/0:28,0:3:5.73:0,6,89	0/0:15,0:15:32.93:0,33,377	0/0:24,0:23:8.19:0,8,757	0/0:21,0:21:46.28:0,46,869	1/1:17,4:11:23.67:285,24,0	0/0:11,0:11:30.09:0,30,618	0/1:27,0:22:72.33:72,0,675	0/1:15,0:14:78.54:79,0,201	0/0:12,0:12:32.94:0,33,528	0/0:14,0:14:33.10:0,33,654	0/1:16,0:14:9.97:10,0,524	0/0:19,0:17:35.95:0,36,601	0/0:18,0:17:39.08:0,39,758	0/1:23,0:22:86.09:86,0,107	0/0:8,0:7:17.78:0,18,128	0/1:16,0:11:54.66:55,0,253	0/1:17,0:14:99:123,0,109	0/1:16,0:10:46.71:47,0,175	0/0:9,0:9:15:0,15,254	0/0:13,0:11:24.01:0,24,398	0/0:26,0:24:34.11:0,34,988	0/0:18,0:17:42.04:0,42,763	0/1:20,0:13:99:102,0,181	0/1:18,0:13:75.86:131,0,76	1/1:2,0:1:2.37:8,2,0
chr10	53286074	.	T	TC	309.72	PASS	AB=0.737;AC=3;AF=0.054;AN=56;BaseQRankSum=3.268;DP=476;FS=0.000;HRun=2;HaplotypeScore=83.9641;InbreedingCoeff=-0.0456;MQ=37.17;MQ0=36;MQRankSum=2.483;QD=6.32;ReadPosRankSum=4.138;VQSLOD=0.7806;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:21:47.89:0,48,626	0/0:8,0:8:21.54:0,22,292	0/0:20,0:3:9.03:0,9,125	0/0:28,0:3:9.01:0,9,97	0/0:14,0:14:33.01:0,33,398	0/0:25,0:24:53.66:0,54,675	0/0:21,0:21:50.14:0,50,635	0/1:16,1:8:3.95:4,0,67	0/0:11,0:11:30.10:0,30,419	0/0:27,0:22:53.75:0,54,554	0/0:15,0:14:25.96:0,26,202	0/0:12,0:12:32.94:0,33,391	0/0:14,0:14:33.11:0,33,455	0/0:16,0:15:35.62:0,36,424	0/0:20,0:18:36.04:0,36,479	0/0:18,0:17:39.10:0,39,523	0/1:8,16:23:16.06:273,0,16	0/1:4,4:7:44.76:124,0,45	0/0:17,0:11:28.87:0,29,269	0/0:17,0:14:24.06:0,24,153	0/0:16,0:10:17.89:0,18,163	0/0:8,0:8:15.01:0,15,186	0/0:13,0:11:24.04:0,24,308	0/0:27,0:25:54.74:0,55,735	0/0:18,0:17:42.05:0,42,540	0/0:19,0:13:22.63:0,23,173	0/0:18,0:13:20.21:0,20,101	0/0:2,0:1:2.98:0,3,21
chr10	53286075	.	T	TTC	590.71	PASS	AB=0.793;AC=4;AF=0.071;AN=56;BaseQRankSum=3.302;DP=475;FS=0.000;HRun=0;HaplotypeScore=87.1737;InbreedingCoeff=0.3371;MQ=37.25;MQ0=33;MQRankSum=1.784;QD=11.81;ReadPosRankSum=-0.211;VQSLOD=3.2731;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:21:45.14:0,45,682	0/0:9,0:9:21.05:0,21,313	0/0:19,0:3:9.03:0,9,146	0/0:27,0:3:9.03:0,9,118	0/0:14,0:14:27:0,27,378	0/0:25,0:24:53.55:0,54,787	0/0:20,0:20:45.62:0,46,699	0/1:18,1:10:21.41:21,0,61	0/0:11,0:11:30.10:0,30,483	0/0:27,0:22:29.37:0,29,574	0/0:15,0:14:0.26:0,0,183	0/0:12,0:12:24.08:0,24,382	0/0:14,0:14:33.11:0,33,510	0/0:16,0:15:29.93:0,30,449	0/0:20,0:18:32.77:0,33,521	0/0:18,0:17:36.12:0,36,579	1/1:8,16:23:29.83:519,30,0	0/1:3,4:6:58.65:164,0,59	0/0:17,0:11:17.34:0,17,290	0/0:18,0:15:13.31:0,13,170	0/0:17,0:11:13.86:0,14,164	0/0:8,0:8:12.04:0,12,191	0/0:12,0:10:21.07:0,21,327	0/0:26,0:24:46.51:0,47,839	0/0:18,0:17:35.83:0,36,576	0/0:19,0:13:11.01:0,11,192	0/0:18,0:13:21.68:0,22,135	0/0:2,0:1:2.22:0,2,7
chr10	53287024	.	GGGA	G	5976.13	PASS	AC=20;AF=0.370;AN=54;BaseQRankSum=13.117;DP=498;FS=11.055;HRun=0;HaplotypeScore=108.9103;InbreedingCoeff=0.9759;MQ=68.51;MQ0=1;MQRankSum=-8.425;QD=34.54;ReadPosRankSum=-0.137;VQSLOD=5.0128;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:60.21:0,60,1261	0/0:8,0:8:24.08:0,24,529	0/0:20,0:18:12.80:0,13,541	0/0:20,0:15:26.44:0,26,570	0/0:21,0:21:57.19:0,57,1210	0/0:12,0:12:32.67:0,33,615	0/0:19,0:19:54.16:0,54,1120	1/1:22,0:21:23.05:141,23,0	0/0:20,0:19:54.18:0,54,1138	1/1:0,18:18:54.16:833,54,0	1/1:4,19:23:54.18:848,54,0	0/0:19,0:19:45.14:0,45,923	0/0:19,0:19:54.17:0,54,1055	0/0:16,0:16:48.03:0,48,982	0/0:13,0:13:39.10:0,39,782	0/0:19,0:19:54.19:0,54,1178	1/1:3,8:11:24.02:338,24,0	1/1:2,10:12:30.10:478,30,0	1/1:1,11:12:14.35:503,14,0	1/1:4,18:22:54.18:854,54,0	1/1:0,5:5:6.02:95,6,0	0/0:19,0:19:57.20:0,57,1222	0/0:16,0:16:45.14:0,45,936	0/0:34,0:34:75.17:0,75,1573	0/0:28,0:27:75.15:0,75,1522	1/1:3,24:27:66.20:1028,66,0	1/1:3,18:21:54.18:859,54,0	./.
chr10	53287025	.	GGA	G	2931.20	PASS	AB=0.955;AC=21;AF=0.389;AN=54;BaseQRankSum=14.345;DP=486;FS=13.025;HRun=0;HaplotypeScore=108.0339;InbreedingCoeff=0.9126;MQ=69.04;MQ0=1;MQRankSum=-7.210;QD=16.11;ReadPosRankSum=-0.320;VQSLOD=2.4647;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:63.20:0,63,1012	0/0:8,0:8:24.08:0,24,417	0/0:18,1:17:16.56:0,17,467	0/1:20,1:15:8.64:9,0,379	0/0:21,0:21:56.98:0,57,942	0/0:12,0:12:32.67:0,33,498	0/0:19,0:19:54.16:0,54,879	1/1:11,11:21:48.55:622,49,0	0/0:20,0:19:54.13:0,54,882	1/1:18,0:18:53.41:366,53,0	1/1:20,0:20:53.36:362,53,0	0/0:19,0:19:45.12:0,45,718	0/0:19,0:19:53.69:0,54,800	0/0:16,0:16:48.03:0,48,769	0/0:13,0:13:36.11:0,36,603	0/0:19,0:19:54.16:0,54,914	1/1:8,0:9:23.44:151,23,0	1/1:11,0:11:29.67:203,30,0	1/1:12,0:12:32.64:223,33,0	1/1:18,1:19:53.43:373,53,0	1/1:5,0:5:5.93:41,6,0	0/0:19,0:19:57.19:0,57,954	0/0:16,0:16:45.14:0,45,751	0/0:33,0:33:75.17:0,75,1249	0/0:28,0:27:74.38:0,74,1181	1/1:25,1:26:63.19:429,63,0	1/1:19,0:18:53.41:365,53,0	./.
chr10	53287051	.	T	TAGAG	2964.28	PASS	AB=0.893;AC=37;AF=0.771;AN=48;BaseQRankSum=0.628;DP=506;FS=3.767;HRun=0;HaplotypeScore=148.3432;InbreedingCoeff=0.4472;MQ=60.74;MQ0=6;MQRankSum=-2.493;QD=7.68;ReadPosRankSum=-1.515;VQSLOD=2.8161;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:20:9.03:147,9,0	0/0:6,0:6:3.01:0,3,47	./.	./.	0/1:19,0:19:0:0,0,0	1/1:13,0:12:3.01:43,3,0	1/1:22,0:22:8.66:151,9,0	1/1:24,0:24:10.24:99,10,0	1/1:22,0:21:15.03:202,15,0	1/1:23,0:22:33.06:477,33,0	0/1:22,0:22:0:0,0,0	0/1:10,9:18:16.68:128,0,17	1/1:14,11:26:17.53:411,18,0	1/1:19,0:19:6.02:109,6,0	0/0:12,0:12:12.04:0,12,187	0/0:16,0:16:3:0,3,37	1/1:9,0:10:6.02:93,6,0	1/1:9,0:10:9.03:131,9,0	1/1:16,0:14:3.01:45,3,0	./.	./.	1/1:21,0:21:8.60:139,9,0	1/1:18,0:18:5.57:47,6,0	1/1:16,11:31:26.41:470,26,0	0/0:26,0:25:0:0,0,1	1/1:23,0:22:13.29:217,13,0	1/1:23,0:23:13.28:177,13,0	1/1:3,0:1:0.47:1,0,0
chr10	53287569	.	T	TTC	4140.37	PASS	AB=0.848;AC=19;AF=0.339;AN=56;BaseQRankSum=12.143;DP=734;FS=10.143;HRun=0;HaplotypeScore=143.9577;InbreedingCoeff=0.7607;MQ=76.30;MQ0=11;MQRankSum=-0.455;QD=17.77;ReadPosRankSum=-2.159;VQSLOD=2.8842;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,109,1285	0/0:21,0:21:39.11:0,39,469	0/0:51,0:24:4.23:0,4,26	0/0:88,0:39:10.55:0,11,148	0/0:20,0:20:24.07:0,24,294	0/0:23,0:22:36.08:0,36,426	0/0:17,0:16:17.59:0,18,221	1/1:39,0:39:22.71:140,23,0	0/0:17,0:17:22.78:0,23,325	1/1:13,10:22:51.17:752,51,0	0/1:19,5:23:3.57:405,0,4	0/0:22,0:23:50.98:0,51,592	0/0:29,0:29:66.03:0,66,772	0/0:23,0:23:30.07:0,30,351	0/0:32,0:32:66.15:0,66,780	0/0:30,0:30:69.20:0,69,833	1/1:5,11:15:8.96:115,9,0	0/1:7,1:7:30.89:46,0,31	1/1:12,3:15:17.83:261,18,0	1/1:18,5:23:39.13:598,39,0	1/1:22,4:25:13.21:462,13,0	0/0:15,0:15:33.05:0,33,389	0/0:16,0:16:27.06:0,27,310	0/0:28,1:29:66.17:0,66,779	0/0:21,0:20:42.13:0,42,515	1/1:18,3:21:42.10:610,42,0	1/1:14,5:19:27.09:395,27,0	0/1:15,3:19:5.95:357,0,6
chr10	53287597	.	CTG	C	980.08	PASS	AB=0.995;AC=17;AF=0.315;AN=54;BaseQRankSum=12.371;DP=557;FS=2.728;HRun=0;HaplotypeScore=110.4701;InbreedingCoeff=0.4093;MQ=46.22;MQ0=15;MQRankSum=-9.125;QD=4.36;ReadPosRankSum=-0.038;VQSLOD=2.8780;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,116,1894	0/0:14,0:14:39:0,39,608	./.	0/1:23,0:6:1.62:2,0,15	0/0:19,0:18:14.96:0,15,120	0/0:19,1:19:23.98:0,24,228	0/0:18,1:18:15.42:0,15,147	1/1:26,0:25:3.78:280,4,0	0/0:15,0:15:17.88:0,18,145	0/1:26,1:25:93.22:139,0,93	0/1:17,0:16:9.63:10,0,33	0/0:17,0:17:45.15:0,45,842	0/0:20,0:20:55.78:0,56,975	0/0:24,1:25:26.84:0,27,207	0/0:31,0:31:80.01:0,80,1320	0/0:26,0:26:66.11:0,66,1040	0/1:13,0:11:10.90:27,0,11	1/1:8,0:6:5.06:21,5,0	1/1:19,0:16:21.45:188,21,0	0/1:17,0:17:37.35:37,0,48	0/1:20,0:17:29.10:29,0,76	0/0:15,0:14:30.50:0,31,423	0/0:15,0:14:30.10:0,30,561	0/0:28,0:28:77.48:0,77,1282	0/0:17,0:16:30:0,30,299	1/1:21,0:21:27.05:265,27,0	1/1:19,0:19:17.66:90,18,0	0/1:15,0:15:3.72:66,0,4
chr10	53287599	.	GTC	G	1982.60	PASS	AB=0.780;AC=17;AF=0.327;AN=52;BaseQRankSum=10.797;DP=549;FS=4.210;HRun=0;HaplotypeScore=109.9439;InbreedingCoeff=0.5628;MQ=46.01;MQ0=15;MQRankSum=-6.131;QD=11.33;ReadPosRankSum=0.534;VQSLOD=3.4521;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,102,1611	0/0:15,0:15:33.10:0,33,511	./.	./.	0/0:19,0:18:0:0,0,0	0/0:20,0:19:6.41:0,6,43	0/0:19,0:18:3.47:0,3,26	0/0:26,0:25:8.51:0,9,34	0/0:15,0:15:2.36:0,2,15	0/1:16,10:24:6.89:324,0,7	1/1:6,10:15:3.01:37,3,0	0/0:16,0:16:45.15:0,45,748	0/0:21,0:21:48.16:0,48,796	0/0:27,0:27:2.74:0,3,13	0/0:30,0:30:75.20:0,75,1142	0/0:26,1:27:60.15:0,60,893	1/1:9,4:11:8.76:89,9,0	1/1:7,1:6:5.95:55,6,0	1/1:8,11:16:39.11:467,39,0	1/1:11,7:17:11.87:153,12,0	0/1:19,3:18:26.34:124,0,26	0/0:16,0:15:24.08:0,24,387	0/0:14,0:13:30.09:0,30,474	0/0:29,0:29:69.21:0,69,1113	0/0:17,0:16:7.76:0,8,52	1/1:9,12:21:42.75:595,43,0	1/1:10,8:18:20.40:223,20,0	0/1:8,5:14:11.17:88,0,11
chr10	53287609	.	CTG	C	1517.55	PASS	AB=0.981;AC=31;AF=0.596;AN=52;BaseQRankSum=9.679;DP=511;FS=4.084;HRun=0;HaplotypeScore=114.4042;InbreedingCoeff=0.6109;MQ=45.08;MQ0=16;MQRankSum=-5.992;QD=5.09;ReadPosRankSum=-2.804;VQSLOD=1.8593;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,105,1639	0/0:14,0:14:31.80:0,32,490	./.	./.	1/1:16,3:18:11.86:98,12,0	1/1:16,0:15:5.99:49,6,0	1/1:21,1:21:5.45:49,5,0	1/1:17,0:16:9.12:176,9,0	1/1:13,1:14:12.83:96,13,0	0/1:23,0:20:24.19:137,0,24	1/1:16,0:15:2.74:12,3,0	0/0:21,0:21:48.07:0,48,752	0/0:20,0:20:39.83:0,40,759	1/1:24,2:26:20.65:159,21,0	0/0:30,0:30:74.80:0,75,1212	0/0:26,0:26:59.81:0,60,958	1/1:12,1:11:9.75:70,10,0	1/1:9,0:6:5.91:55,6,0	1/1:20,0:17:24.67:206,25,0	1/1:17,0:16:11.30:57,11,0	0/1:16,1:13:31.51:32,0,43	0/0:14,0:13:24.93:0,25,424	0/0:16,0:15:27.06:0,27,424	0/0:26,0:26:66.18:0,66,1164	1/1:16,0:16:20.96:170,21,0	0/1:26,0:26:10.01:232,0,10	1/1:20,0:19:2.40:73,2,0	1/1:7,0:7:2.67:41,3,0
chr10	53287621	.	CTCTCTG	C	165.56	PASS	AB=1.000;AC=10;AF=0.185;AN=54;BaseQRankSum=5.055;DP=531;FS=6.271;HRun=0;HaplotypeScore=141.2147;InbreedingCoeff=0.1812;MQ=42.25;MQ0=19;MQRankSum=-5.330;QD=1.51;ReadPosRankSum=-4.760;VQSLOD=0.3407;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:84.57:0,85,2337	0/0:17,0:17:32.99:0,33,574	0/0:11,0:1:2.97:0,3,20	0/0:11,0:3:8.08:0,8,45	1/1:22,0:21:2.82:24,3,0	0/0:17,0:16:2.98:0,3,23	0/0:23,0:22:1.32:0,1,3	0/1:15,0:14:20.85:70,0,21	0/1:15,0:15:17.46:17,0,28	0/0:29,0:26:2.53:0,3,618	./.	0/0:19,0:19:36.11:0,36,1104	0/0:20,0:20:23.41:0,23,1003	0/1:25,0:25:37.84:38,0,50	0/0:28,0:28:72.15:0,72,1991	0/0:22,0:22:54.10:0,54,1342	1/1:11,1:10:1.14:63,1,0	1/1:4,3:4:3.01:63,3,0	0/0:13,0:10:13.41:0,13,369	0/0:19,0:18:5.60:0,6,81	0/0:15,0:11:6.02:0,6,109	0/0:14,0:14:21.96:0,22,639	0/0:17,0:15:26.51:0,27,702	0/0:25,0:25:62.97:0,63,1491	0/1:14,0:14:18.92:19,0,44	0/0:28,0:28:29.93:0,30,764	0/0:24,0:21:13.92:0,14,278	0/0:8,0:8:0.01:0,0,102
chr10	53287641	.	CTGTGTGTGTGTGTGCG	C	671.59	PASS	AB=0.993;AC=18;AF=0.360;AN=50;BaseQRankSum=5.472;DP=534;FS=5.528;HRun=0;HaplotypeScore=186.8935;InbreedingCoeff=0.1650;MQ=41.14;MQ0=20;MQRankSum=-7.454;QD=2.85;ReadPosRankSum=-1.617;VQSLOD=2.3887;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:56.95:0,57,2348	0/0:13,0:13:23.96:0,24,1170	1/1:17,0:1:2.04:6,2,0	0/0:17,0:4:1.91:0,2,25	0/1:17,1:18:0:0,0,0	1/1:19,1:18:3.01:91,3,0	0/0:18,0:18:0.26:0,0,1	0/1:15,0:14:65.64:66,0,283	1/1:15,0:15:3.01:94,3,0	0/1:33,0:31:99:153,0,435	./.	0/0:21,0:21:26.70:0,27,934	0/0:19,0:20:17.95:0,18,375	1/1:20,2:22:3.01:74,3,0	0/0:27,0:27:62.90:0,63,2039	0/0:19,0:20:44.65:0,45,2110	0/1:10,0:8:10.53:11,0,130	0/1:5,0:3:16.37:16,0,83	0/1:16,0:11:62.23:62,0,169	./.	0/0:12,0:8:2.99:0,3,24	0/0:23,0:23:26.64:0,27,516	0/0:20,0:19:20.70:0,21,523	0/0:20,0:20:28.98:0,29,825	./.	0/1:32,0:32:99:196,0,380	0/1:26,0:23:0.09:40,0,0	1/1:7,0:6:0.89:2,1,0
chr10	53287642	.	TGTGTGTGTGTGTGC	T	916.64	PASS	AB=0.946;AC=19;AF=0.380;AN=50;BaseQRankSum=6.140;DP=516;FS=4.025;HRun=0;HaplotypeScore=169.5653;InbreedingCoeff=0.2145;MQ=41.43;MQ0=19;MQRankSum=-8.654;QD=4.11;ReadPosRankSum=-1.247;VQSLOD=2.4676;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:56.95:0,57,2211	0/0:13,0:13:23.73:0,24,1164	1/1:17,0:1:2.04:6,2,0	0/0:17,0:4:1.91:0,2,25	0/1:7,11:18:0:0,0,0	1/1:18,1:17:3.01:73,3,0	0/0:18,0:18:0.26:0,0,1	0/1:13,0:12:72.51:73,0,181	1/1:12,2:14:3.01:111,3,0	0/1:32,0:30:99:246,0,155	./.	0/0:21,0:21:26.70:0,27,793	0/0:20,0:20:17.95:0,18,331	1/1:7,14:21:3.01:92,3,0	0/0:28,0:28:65.91:0,66,2063	0/0:21,0:21:47.66:0,48,2139	0/1:9,0:7:11.48:11,0,75	0/1:4,0:3:16.37:16,0,64	0/1:15,0:10:81.69:82,0,98	./.	0/0:10,0:7:2.99:0,3,24	0/0:21,0:21:26.72:0,27,481	0/0:20,0:19:20.40:0,20,472	0/0:19,0:19:28.98:0,29,736	./.	0/1:32,0:32:99:258,0,180	1/1:24,0:21:8.70:77,9,0	1/1:5,0:4:2.96:19,3,0
chr10	53287644	.	TGTGTGTGTGTGC	T	1199.58	PASS	AB=0.992;AC=19;AF=0.380;AN=50;BaseQRankSum=6.355;DP=514;FS=6.011;HRun=0;HaplotypeScore=157.4351;InbreedingCoeff=0.2219;MQ=41.63;MQ0=17;MQRankSum=-8.516;QD=5.36;ReadPosRankSum=-1.916;VQSLOD=2.1602;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:56.95:0,57,1935	0/0:13,0:13:23.73:0,24,998	1/1:17,0:1:2.04:6,2,0	0/0:17,0:4:1.91:0,2,25	0/1:17,1:18:0:0,0,0	1/1:4,16:18:3.01:55,3,0	0/0:18,0:18:0.26:0,0,1	0/1:13,0:13:80.37:80,0,165	1/1:12,1:13:3.01:94,3,0	0/1:32,0:30:12.24:395,0,12	./.	0/0:21,0:21:26.70:0,27,668	0/0:20,0:20:17.95:0,18,278	1/1:21,0:21:3.01:74,3,0	0/0:29,0:29:68.92:0,69,1951	0/0:21,0:21:47.66:0,48,1877	0/1:9,0:7:11.89:12,0,36	0/1:4,0:3:16.37:16,0,45	0/1:15,0:9:29.15:107,0,29	./.	0/0:8,0:6:2.99:0,3,24	0/0:21,0:21:26.68:0,27,413	0/0:21,0:20:20.33:0,20,446	0/0:19,0:19:28.98:0,29,626	./.	0/1:33,0:33:38.15:327,0,38	1/1:24,0:21:8.96:144,9,0	1/1:5,0:4:3.01:37,3,0
chr10	53287646	.	TGTGTGTGTGC	T	1840.51	PASS	AB=0.988;AC=21;AF=0.420;AN=50;BaseQRankSum=6.648;DP=517;FS=9.537;HRun=0;HaplotypeScore=145.2203;InbreedingCoeff=0.4690;MQ=42.01;MQ0=17;MQRankSum=-9.139;QD=8.22;ReadPosRankSum=-1.260;VQSLOD=1.5690;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:59.96:0,60,1686	0/0:12,0:12:23.64:0,24,867	1/1:17,0:1:2.04:6,2,0	0/0:17,0:4:1.90:0,2,25	0/1:18,0:18:0:0,0,0	1/1:20,0:18:3.01:38,3,0	0/0:18,0:18:0.60:0,1,1	0/1:10,0:10:99:114,0,102	1/1:12,1:13:3.01:93,3,0	1/1:31,1:30:51.15:721,51,0	./.	0/0:22,0:22:29.69:0,30,561	0/0:19,0:19:17.95:0,18,266	1/1:21,0:21:3.01:55,3,0	0/0:29,0:29:68.88:0,69,1654	0/0:22,0:22:50.45:0,50,1640	0/1:9,0:7:1.75:15,0,2	0/1:4,0:3:16.37:16,0,26	0/1:14,1:9:4.04:140,0,4	./.	0/0:9,0:6:2.99:0,3,24	0/0:22,0:22:26.68:0,27,364	0/0:23,0:22:20.46:0,20,364	0/0:18,0:18:28.98:0,29,569	./.	1/1:34,0:34:68.97:586,69,0	1/1:26,0:23:8.96:160,9,0	1/1:5,0:4:3.01:57,3,0
chr10	53287648	.	TGTGTGTGC	T	2162.54	PASS	AB=1.000;AC=26;AF=0.481;AN=54;BaseQRankSum=6.969;DP=513;FS=20.107;HRun=0;HaplotypeScore=132.8192;InbreedingCoeff=0.6002;MQ=41.99;MQ0=17;MQRankSum=-9.443;QD=8.94;ReadPosRankSum=-0.869;VQSLOD=1.3255;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:59.88:0,60,1343	0/0:12,0:12:23.98:0,24,723	1/1:17,0:1:2.04:6,2,0	0/0:17,0:4:1.91:0,2,25	0/0:18,0:18:0:0,0,0	1/1:20,0:18:2.98:21,3,0	0/0:18,0:18:0.73:0,1,1	0/1:11,0:11:62.17:111,0,62	1/1:13,0:13:3.01:75,3,0	1/1:29,3:30:74.70:806,75,0	1/1:16,0:16:3.01:46,3,0	0/0:20,0:20:29.66:0,30,494	0/0:19,0:19:17.95:0,18,259	1/1:21,0:21:3.01:38,3,0	0/0:29,0:29:68.84:0,69,1359	0/0:24,0:24:56.47:0,56,1431	1/1:9,0:7:9.79:50,10,0	1/1:4,0:3:1.93:20,2,0	1/1:14,1:9:14.71:158,15,0	0/1:18,0:17:0:0,0,0	0/0:9,0:6:2.99:0,3,24	0/0:21,0:21:26.68:0,27,314	0/0:22,0:21:20.53:0,21,290	0/0:17,0:17:28.96:0,29,472	./.	1/1:36,0:36:82.06:759,82,0	1/1:25,1:23:8.96:177,9,0	1/1:4,0:3:3.01:67,3,0
chr10	53287650	.	TGTGTGC	T	2004.14	PASS	AB=1.000;AC=28;AF=0.519;AN=54;BaseQRankSum=6.810;DP=509;FS=21.665;HRun=0;HaplotypeScore=123.6389;InbreedingCoeff=0.6230;MQ=42.01;MQ0=17;MQRankSum=-9.591;QD=7.24;ReadPosRankSum=-0.813;VQSLOD=0.8855;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:58.91:0,59,1074	0/0:12,0:12:23.94:0,24,564	1/1:18,0:1:2.04:6,2,0	0/0:17,0:4:1.90:0,2,25	0/1:18,0:18:0:0,0,0	1/1:20,0:18:2.96:19,3,0	0/1:17,0:17:0.34:0,0,1	0/1:11,0:11:7.95:118,0,8	1/1:13,0:13:3.01:57,3,0	1/1:33,0:31:78.81:709,79,0	1/1:15,1:16:2.99:24,3,0	0/0:20,0:20:27.13:0,27,365	0/0:18,0:18:17.95:0,18,215	1/1:21,0:21:2.98:22,3,0	0/0:28,0:28:68.07:0,68,1074	0/0:24,0:24:56.28:0,56,1089	1/1:9,0:7:10.06:72,10,0	1/1:4,0:3:5.94:41,6,0	1/1:15,0:9:17.92:177,18,0	0/1:17,0:16:0:0,0,0	0/0:9,0:6:2.99:0,3,24	0/0:21,0:21:26.68:0,27,258	0/0:21,0:20:20.78:0,21,241	0/0:18,0:18:28.90:0,29,344	./.	1/1:12,24:36:84.30:737,84,0	1/1:11,15:24:8.96:129,9,0	1/1:2,1:2:3.01:67,3,0
chr10	53287652	.	TGTGC	T	1956.48	PASS	AB=0.974;AC=30;AF=0.556;AN=54;BaseQRankSum=7.015;DP=502;FS=17.344;HRun=0;HaplotypeScore=113.1133;InbreedingCoeff=0.6277;MQ=42.05;MQ0=17;MQRankSum=-9.388;QD=6.63;ReadPosRankSum=-1.654;VQSLOD=1.0348;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:36.13:0,36,779	0/0:13,0:13:26.98:0,27,442	1/1:20,0:1:2.04:6,2,0	0/0:17,0:4:1.91:0,2,25	0/1:18,0:18:0:0,0,0	1/1:19,0:17:2.96:19,3,0	0/1:17,0:17:0.21:0,0,0	1/1:11,0:11:26.10:179,26,0	1/1:14,0:14:5.98:60,6,0	1/1:30,2:30:80.23:676,80,0	1/1:13,1:14:2.98:22,3,0	0/1:21,0:21:13.32:13,0,233	0/0:18,0:18:17.94:0,18,173	1/1:20,0:20:2.96:19,3,0	0/0:27,0:27:59.60:0,60,816	0/0:24,0:24:51.19:0,51,778	1/1:9,0:7:10.15:93,10,0	1/1:4,0:3:5.94:41,6,0	1/1:15,0:9:17.92:156,18,0	0/1:15,2:16:0:0,0,0	0/0:8,1:6:2.99:0,3,24	0/0:21,0:21:26.67:0,27,207	0/0:18,0:19:20.76:0,21,182	0/0:18,0:18:28.83:0,29,275	./.	1/1:34,1:35:84.35:709,84,0	1/1:26,0:23:8.96:92,9,0	1/1:3,0:2:3.01:47,3,0
chr10	53287654	.	TGC	T	1720.34	PASS	AB=1.000;AC=28;AF=0.519;AN=54;BaseQRankSum=6.929;DP=495;FS=15.554;HRun=0;HaplotypeScore=101.5794;InbreedingCoeff=0.6065;MQ=41.63;MQ0=16;MQRankSum=-8.546;QD=6.35;ReadPosRankSum=-1.285;VQSLOD=1.9317;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:21.59:0,22,546	0/0:12,0:12:14.25:0,14,281	0/1:22,0:2:0.85:1,0,17	0/0:21,0:4:1.91:0,2,25	0/0:18,0:18:0:0,0,0	1/1:19,0:17:2.96:19,3,0	0/1:16,0:16:0.13:0,0,0	1/1:11,0:11:28.68:204,29,0	1/1:14,0:14:5.96:44,6,0	1/1:33,0:31:83.15:600,83,0	1/1:14,0:14:2.98:22,3,0	0/1:18,0:18:20.23:20,0,128	0/0:15,1:16:17.62:0,18,133	1/1:20,0:20:2.96:19,3,0	0/0:22,4:26:39.22:0,39,590	0/0:24,0:24:49.63:0,50,516	1/1:9,0:7:10.16:75,10,0	1/1:4,0:3:5.94:41,6,0	1/1:14,0:8:17.91:137,18,0	0/1:14,0:14:0:0,0,0	0/0:9,0:6:2.99:0,3,24	0/0:21,0:21:25.67:0,26,152	0/0:18,0:18:17.17:0,17,116	0/0:18,0:18:28.81:0,29,208	./.	1/1:35,0:35:84.33:624,84,0	1/1:24,1:22:8.91:62,9,0	1/1:3,0:2:3:29,3,0
chr10	53287656	.	C	CGTGTGT	417.42	PASS	AB=0.951;AC=16;AF=0.348;AN=46;BaseQRankSum=0.726;DP=493;FS=0.000;HRun=0;HaplotypeScore=127.4745;InbreedingCoeff=0.2455;MQ=41.82;MQ0=15;MQRankSum=0.738;QD=2.00;ReadPosRankSum=-3.805;VQSLOD=1.2494;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:28:29.31:0,29,530	0/0:9,0:11:21.03:0,21,353	0/0:23,0:3:2.87:0,3,22	./.	0/1:17,0:17:0:0,0,0	0/0:19,0:17:0.47:0,0,1	1/1:18,0:18:3.46:24,3,0	0/0:11,0:11:2.79:0,3,19	0/1:14,0:14:30.97:31,0,31	0/1:31,0:29:9.93:10,0,178	1/1:12,0:12:2.22:7,2,0	1/1:18,0:18:13.58:266,14,0	1/1:9,7:19:5.83:134,6,0	0/0:21,0:21:0.47:0,0,1	0/0:24,0:24:26.69:0,27,436	0/0:22,0:22:30.05:0,30,498	0/1:9,0:7:0.56:1,0,1	./.	0/0:13,0:8:1.73:0,2,37	./.	./.	0/0:13,6:23:2.94:0,3,51	0/1:10,6:17:6.23:6,0,56	1/1:14,0:18:3.01:38,3,0	./.	0/1:36,0:36:28.55:29,0,138	0/0:24,0:21:6.02:0,6,79	0/0:3,0:2:3.01:0,3,39
chr10	53288518	.	G	GAGGTAGTCACAT	36922.91	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-3.401;DP=733;FS=7.906;HRun=0;HaplotypeScore=233.5448;InbreedingCoeff=0.9972;MQ=77.27;MQ0=0;MQRankSum=-20.318;QD=138.29;ReadPosRankSum=-2.597;VQSLOD=3.7299;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,120,4368	0/0:12,0:12:33.08:0,33,1066	0/0:22,0:22:46.43:0,46,1590	0/0:20,0:20:51.13:0,51,1525	0/0:24,0:24:66.23:0,66,2373	0/0:29,0:29:84.29:0,84,3015	0/0:21,0:21:60.21:0,60,2239	1/1:38,9:48:99:6985,138,0	0/0:27,0:27:78.27:0,78,2754	1/1:10,19:30:87.30:4894,87,0	1/1:8,14:23:51.18:3089,51,0	0/0:29,0:29:81.28:0,81,2941	0/0:29,0:29:87.30:0,87,3307	0/0:37,0:37:99:0,108,3985	0/0:35,0:35:99:0,105,3818	0/0:36,0:36:99:0,108,3769	1/1:8,8:20:36.12:2106,36,0	1/1:3,3:8:18.06:947,18,0	1/1:11,5:16:39.13:2120,39,0	1/1:11,14:26:51.18:3135,51,0	1/1:8,7:19:30.10:1811,30,0	0/0:27,0:27:78.27:0,78,2909	0/0:30,0:30:87.26:0,87,3049	0/0:28,0:28:81.28:0,81,3046	0/0:19,0:19:57.20:0,57,2153	1/1:16,13:32:96.33:5519,96,0	1/1:13,22:39:99:5815,99,0	1/1:5,1:6:16.95:500,17,0
chr10	53288870	.	AC	A	7221.39	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=15.615;DP=755;FS=4.638;HRun=1;HaplotypeScore=71.3697;InbreedingCoeff=0.9980;MQ=87.67;MQ0=0;MQRankSum=-2.516;QD=39.25;ReadPosRankSum=1.240;VQSLOD=5.5858;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,123,1868	0/0:7,0:7:21.07:0,21,321	0/0:29,0:29:87.21:0,87,1204	0/0:24,0:24:69.15:0,69,934	0/0:32,0:32:96.29:0,96,1417	0/0:31,0:31:93.30:0,93,1400	0/0:23,0:23:69.18:0,69,990	0/0:33,0:33:99:0,99,1418	0/0:30,0:30:90.24:0,90,1287	1/1:1,30:31:93.30:1265,93,0	1/1:0,22:22:60.03:748,60,0	0/0:23,0:23:69.13:0,69,1005	0/0:26,0:26:78.25:0,78,1173	0/0:22,0:22:66.19:0,66,964	0/0:36,0:36:99:0,108,1611	0/0:36,0:36:99:0,108,1589	0/0:34,0:34:99:0,102,1467	0/0:24,0:24:72.24:0,72,1097	1/1:0,19:19:57.17:765,57,0	1/1:0,28:28:81.16:1067,81,0	1/1:0,22:22:60.20:839,60,0	0/0:34,0:34:99:0,99,1492	0/0:28,0:28:84.25:0,84,1238	0/0:38,0:38:99:0,114,1724	0/0:20,0:20:60.17:0,60,875	1/1:0,34:34:99:1406,102,0	1/1:0,22:22:63.21:880,63,0	1/1:0,6:6:18.06:251,18,0
chr10	53289762	.	CT	C	5495.04	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=14.902;DP=588;FS=1.149;HRun=2;HaplotypeScore=88.1848;InbreedingCoeff=0.9940;MQ=66.92;MQ0=0;MQRankSum=-9.343;QD=40.40;ReadPosRankSum=-0.168;VQSLOD=4.7628;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,123,1937	0/0:13,0:13:36.12:0,36,576	0/0:24,0:24:72.20:0,72,1083	0/0:22,0:21:60.03:0,60,880	1/1:2,20:22:63.20:841,63,0	1/1:1,21:22:66.21:896,66,0	1/1:1,23:24:69.23:959,69,0	0/0:32,0:32:93.30:0,93,1426	1/1:1,30:31:93.27:1272,93,0	0/0:18,0:18:51.17:0,51,815	0/0:8,0:8:24.07:0,24,361	0/0:19,1:20:18.33:0,18,867	0/0:24,0:24:72.23:0,72,1127	1/1:3,19:22:66.22:921,66,0	0/0:22,0:22:63.13:0,63,959	0/0:27,0:27:81.28:0,81,1294	0/0:29,0:29:87.28:0,87,1362	0/0:14,0:14:42.14:0,42,671	0/0:19,0:18:54.18:0,54,842	0/0:17,0:17:45.15:0,45,709	0/0:35,0:35:99:0,105,1652	0/0:14,0:14:42.12:0,42,642	0/0:7,0:7:21.07:0,21,336	0/0:14,0:14:42.14:0,42,669	1/1:0,15:15:45.15:606,45,0	0/0:27,0:27:81.26:0,81,1252	0/0:18,0:17:54.18:0,54,860	0/0:5,0:5:15.05:0,15,240
chr10	53289791	.	GACTACCC	G	7916.16	PASS	AB=0.950;AC=13;AF=0.232;AN=56;BaseQRankSum=14.955;DP=521;FS=7.333;HRun=0;HaplotypeScore=141.0142;InbreedingCoeff=0.8906;MQ=84.46;MQ0=0;MQRankSum=-15.216;QD=54.59;ReadPosRankSum=2.038;VQSLOD=4.2199;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:72.25:0,72,2876	0/0:8,0:8:24.06:0,24,858	0/0:21,0:21:63.22:0,63,2355	0/0:28,0:28:72.24:0,72,2493	1/1:3,17:20:36.12:922,36,0	1/1:2,17:19:51.16:1263,51,0	1/1:2,24:26:66.23:1705,66,0	0/0:26,0:26:69.24:0,69,2760	1/1:6,17:23:57.18:1373,57,0	0/0:8,0:8:24.08:0,24,950	0/0:6,0:6:15.05:0,15,521	0/1:18,1:19:20.68:21,0,1982	0/0:22,0:22:66.23:0,66,2618	1/1:2,23:25:69.24:1776,69,0	0/0:28,0:28:84.27:0,84,3125	0/0:25,0:25:75.26:0,75,2775	0/0:23,0:23:69.24:0,69,2677	0/0:13,0:13:39.13:0,39,1549	0/0:21,0:21:63.22:0,63,2374	0/0:14,0:14:39.13:0,39,1560	0/0:30,0:30:87.30:0,87,3332	0/0:14,0:14:42.14:0,42,1603	0/0:7,0:7:21.07:0,21,823	0/0:19,0:19:57.20:0,57,2091	1/1:0,13:13:33.11:857,33,0	0/0:20,0:20:57.18:0,57,2048	0/0:15,0:14:45.15:0,45,1798	0/0:4,0:4:12.04:0,12,478
chr10	53292238	.	C	CTTCCGTTCA	18320.65	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-4.312;DP=718;FS=13.425;HRun=0;HaplotypeScore=186.9022;InbreedingCoeff=0.9997;MQ=83.04;MQ0=0;MQRankSum=-17.153;QD=106.52;ReadPosRankSum=-1.180;VQSLOD=4.5949;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:75.21:0,75,2157	0/0:12,0:12:36.12:0,36,1059	0/0:27,0:27:63.91:0,64,1561	0/0:22,0:22:48.16:0,48,1367	1/1:8,29:41:87.30:3539,87,0	1/1:5,20:27:72.25:3285,72,0	1/1:6,11:21:48.16:2125,48,0	0/0:32,0:32:90.31:0,90,2604	1/1:8,15:26:60.21:2660,60,0	0/0:31,0:31:87.30:0,87,2675	0/0:34,0:34:96.32:0,96,2872	0/0:30,0:30:87.30:0,87,2587	0/0:32,0:32:90.31:0,90,2656	1/1:6,23:31:87.26:3739,87,0	0/0:31,0:31:90.30:0,90,2678	0/0:26,0:26:75.26:0,75,2289	0/0:23,0:23:69.19:0,69,1997	0/0:12,0:12:36.04:0,36,967	0/0:20,0:20:54.19:0,54,1648	0/0:28,0:28:81.26:0,81,2318	0/0:18,0:18:54.19:0,54,1676	0/0:27,0:27:78.24:0,78,2195	0/0:28,0:28:72.25:0,72,2163	0/0:24,0:24:72.25:0,72,2207	1/1:8,15:26:69.24:2973,69,0	0/0:20,0:20:60.21:0,60,1796	0/0:32,0:32:93.30:0,93,2811	0/0:11,0:11:27.09:0,27,782
chr10	53292924	.	ACACT	A	1717.22	PASS	AB=0.968;AC=19;AF=0.339;AN=56;BaseQRankSum=1.969;DP=615;FS=3.720;HRun=0;HaplotypeScore=126.7423;InbreedingCoeff=0.7357;MQ=72.59;MQ0=12;MQRankSum=-3.710;QD=8.02;ReadPosRankSum=-1.336;VQSLOD=2.4772;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:42.70:0,43,693	0/0:9,0:9:3.63:0,4,305	0/0:35,0:23:49.28:0,49,525	0/0:31,0:19:32.63:0,33,344	1/1:24,1:24:31.74:281,32,0	0/1:17,2:19:16.35:115,0,16	1/1:16,2:18:32.67:265,33,0	1/1:17,0:17:47.95:421,48,0	1/1:19,0:18:9.97:157,10,0	0/0:23,0:23:50.68:0,51,499	0/0:14,0:14:22.64:0,23,225	0/0:24,0:24:71.64:0,72,1024	0/0:22,0:22:19.61:0,20,599	1/1:23,1:24:29.15:266,29,0	0/0:30,0:29:74.40:0,74,1106	0/0:18,0:17:39.02:0,39,605	1/1:25,0:24:3.13:6,3,0	1/1:17,0:16:29.88:169,30,0	0/0:18,0:17:37.81:0,38,433	0/0:23,0:23:23.78:0,24,368	0/0:32,0:31:72.26:0,72,724	0/0:15,0:15:38.98:0,39,485	0/0:12,0:12:21.44:0,21,230	0/0:41,0:41:99:0,106,1641	1/1:19,0:18:15.88:215,16,0	0/0:17,0:17:43.26:0,43,480	0/1:27,0:27:18.14:18,0,270	0/1:4,0:4:0.97:1,0,40
chr10	53292926	.	ACT	A	2255.90	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=0.855;DP=624;FS=4.242;HRun=0;HaplotypeScore=107.6825;InbreedingCoeff=0.9514;MQ=70.18;MQ0=13;MQRankSum=-1.615;QD=11.94;ReadPosRankSum=-2.353;VQSLOD=2.8480;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:37:90.35:0,90,745	0/0:10,0:10:3.82:0,4,256	0/0:33,0:21:49.28:0,49,525	0/0:30,0:18:32.63:0,33,343	1/1:26,0:25:43.46:345,43,0	1/1:19,0:19:23.28:160,23,0	1/1:18,0:18:32.03:237,32,0	1/1:18,0:17:47.95:421,48,0	1/1:21,0:20:12.01:163,12,0	0/0:23,0:23:61.71:0,62,520	0/0:14,0:14:31.43:0,31,251	0/0:24,0:24:71.62:0,72,800	0/0:23,0:23:49.58:0,50,557	1/1:23,0:23:36.07:294,36,0	0/0:31,0:30:54.02:0,54,782	0/0:16,0:15:27.33:0,27,443	1/1:0,25:24:12.04:182,12,0	1/1:14,4:17:44.20:425,44,0	0/0:17,0:16:39.11:0,39,438	0/0:24,0:24:44.70:0,45,385	0/0:32,0:31:64.40:0,64,557	0/0:17,0:17:41.78:0,42,447	0/0:13,0:13:15.63:0,16,184	0/0:40,0:40:66.45:0,66,1133	1/1:20,1:20:26.59:240,27,0	0/0:18,0:18:51.73:0,52,429	0/0:28,0:28:45.44:0,45,355	0/0:4,0:4:7.54:0,8,53
chr10	53292928	.	TCACACACA	T	1383.07	PASS	AB=0.859;AC=12;AF=0.231;AN=52;BaseQRankSum=1.555;DP=668;FS=0.711;HRun=0;HaplotypeScore=176.5687;InbreedingCoeff=0.0167;MQ=67.36;MQ0=17;MQRankSum=-1.432;QD=6.43;ReadPosRankSum=1.375;VQSLOD=2.3244;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:43:29.70:0,30,262	0/0:11,0:11:18.04:0,18,485	./.	./.	0/1:26,0:25:3.10:3,0,324	0/0:18,0:18:12:0,12,301	1/1:21,0:21:4.30:21,4,0	0/0:17,0:16:3:0,3,30	0/0:20,0:19:9.33:0,9,118	0/1:16,7:23:64.99:299,0,65	0/1:11,4:15:37.48:65,0,37	0/0:25,0:25:36.09:0,36,1219	0/0:23,0:25:36:0,36,781	0/0:26,0:26:12.04:0,12,239	0/0:34,0:33:51.46:0,51,1533	0/0:17,0:17:27.09:0,27,958	0/0:29,0:27:12.04:0,12,297	0/0:21,0:20:19.11:0,19,868	0/1:18,0:17:64.19:64,0,88	0/1:18,6:25:12.48:138,0,12	0/1:32,0:32:99:276,0,111	0/0:21,0:21:24.06:0,24,573	0/0:13,0:13:7.68:0,8,182	0/0:45,0:46:86.44:0,86,2385	0/0:21,0:20:14.73:0,15,210	0/1:20,0:19:24.01:92,0,24	0/1:11,18:28:44.03:493,0,44	1/1:3,1:4:2.98:75,3,0
chr10	53292967	.	C	CAG	933.59	PASS	AB=1.000;AC=14;AF=0.250;AN=56;BaseQRankSum=9.546;DP=785;FS=5.876;HRun=0;HaplotypeScore=123.5502;InbreedingCoeff=0.7302;MQ=55.40;MQ0=19;MQRankSum=1.222;QD=4.08;ReadPosRankSum=2.246;VQSLOD=2.1075;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:44:77.43:0,77,609	0/0:9,0:9:18.86:0,19,203	0/0:29,0:13:25.27:0,25,232	0/0:31,0:12:19.97:0,20,234	1/1:16,3:18:26.97:304,27,0	1/1:15,3:18:11.89:140,12,0	1/1:29,2:31:7.97:48,8,0	0/0:35,0:33:86.35:0,86,709	1/1:5,25:29:9.32:64,9,0	0/1:30,0:29:33.68:34,0,532	0/0:22,0:21:35.80:0,36,276	0/0:28,0:28:59.11:0,59,772	0/0:31,0:31:74.71:0,75,667	1/1:3,28:31:10.28:160,10,0	0/0:40,0:37:75.94:0,76,795	0/0:35,0:34:61.82:0,62,702	0/0:35,0:32:41.42:0,41,337	0/0:23,0:22:58.40:0,58,463	0/0:18,0:17:19.54:0,20,311	0/0:24,0:24:38.66:0,39,296	0/1:49,0:50:71.83:72,0,600	0/0:27,0:26:59.92:0,60,559	0/0:14,0:14:7.90:0,8,171	0/0:45,0:43:99:0,114,1210	1/1:20,0:20:33.46:295,33,0	0/0:25,0:25:4.45:0,4,384	0/0:32,0:31:58.51:0,59,393	0/0:8,0:8:20.71:0,21,146
chr10	53292969	.	C	CAGAG	1427.03	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=7.045;DP=779;FS=1.352;HRun=0;HaplotypeScore=144.9317;InbreedingCoeff=0.9339;MQ=55.80;MQ0=17;MQRankSum=-0.036;QD=9.71;ReadPosRankSum=3.172;VQSLOD=3.2354;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:44:35.39:0,35,966	0/0:9,0:9:21.04:0,21,314	0/0:30,0:15:36.01:0,36,556	0/0:29,0:12:29.83:0,30,485	1/1:18,0:17:26.95:449,27,0	1/1:6,12:19:12.04:264,12,0	1/1:31,0:31:5.96:55,6,0	0/0:35,0:33:94.83:0,95,1391	1/1:29,0:28:4.72:97,5,0	0/0:30,0:29:75.23:0,75,1131	0/0:21,0:20:35.77:0,36,489	0/0:28,0:28:81.22:0,81,1314	0/0:32,0:32:81.13:0,81,1212	1/1:30,0:30:11.96:173,12,0	0/0:38,0:36:84.52:0,85,1263	0/0:34,0:33:78.26:0,78,1293	0/0:35,0:32:47.17:0,47,659	0/0:24,0:23:69.10:0,69,917	0/0:17,0:16:42.02:0,42,587	0/0:21,0:22:43.36:0,43,594	0/0:50,0:50:99:0,119,1585	0/0:27,0:27:63.18:0,63,1003	0/0:15,0:15:27.01:0,27,365	0/0:46,0:44:99:0,117,1864	1/1:20,0:20:38.97:562,39,0	0/0:24,0:24:66.07:0,66,966	0/0:32,0:31:60.60:0,61,730	0/0:8,0:8:18.06:0,18,254
chr10	53292971	.	C	CAGAGAG	1893.55	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=1.808;DP=787;FS=0.000;HRun=0;HaplotypeScore=169.7345;InbreedingCoeff=0.9251;MQ=57.87;MQ0=17;MQRankSum=0.395;QD=12.38;ReadPosRankSum=2.959;VQSLOD=2.5935;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:43:74.53:0,75,1469	0/0:9,0:9:21.04:0,21,390	0/0:30,0:15:44.60:0,45,870	0/0:33,0:16:32.77:0,33,700	1/1:18,0:17:26.67:601,27,0	1/1:19,0:19:12.04:239,12,0	1/1:7,27:34:4.23:30,4,0	0/0:36,0:34:99:0,99,1977	1/1:31,0:30:4.55:204,5,0	0/0:28,0:27:75.59:0,76,1497	0/0:21,0:20:33.11:0,33,703	0/0:27,0:27:78.27:0,78,1749	0/0:32,0:32:77.52:0,78,1527	1/1:30,0:30:12.04:214,12,0	0/0:38,0:36:84.75:0,85,1710	0/0:33,0:32:78.27:0,78,1778	0/0:33,0:30:43.70:0,44,901	0/0:24,0:23:66.16:0,66,1185	0/0:18,0:17:45.13:0,45,819	0/0:23,0:23:46.38:0,46,893	0/0:48,0:48:99:0,103,1864	0/0:28,0:28:69.21:0,69,1362	0/0:15,0:15:29.98:0,30,533	0/0:46,0:44:99:0,117,2300	1/1:21,0:21:34.59:777,35,0	0/0:23,0:23:66.06:0,66,1244	0/0:34,0:33:63.18:0,63,1079	0/0:10,0:10:18.05:0,18,367
chr10	53293470	.	GA	G	6017.52	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=17.435;DP=733;FS=7.836;HRun=1;HaplotypeScore=98.3232;InbreedingCoeff=0.9998;MQ=76.14;MQ0=0;MQRankSum=-2.216;QD=38.57;ReadPosRankSum=1.361;VQSLOD=4.8883;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,129,2035	0/0:10,0:10:30.10:0,30,479	0/0:22,0:22:59.82:0,60,841	0/0:23,0:23:56.37:0,56,777	1/1:0,33:33:84.19:1138,84,0	1/1:0,23:23:66.22:922,66,0	1/1:0,22:22:63.21:880,63,0	0/0:37,0:37:99:0,111,1733	1/1:2,22:24:69.21:946,69,0	0/0:30,0:30:87.28:0,87,1332	0/0:21,0:21:63.20:0,63,982	0/0:30,0:30:90.29:0,90,1415	0/0:34,0:34:99:0,102,1576	1/1:1,28:29:87.08:1166,87,0	0/0:32,0:32:96.31:0,96,1501	0/0:25,1:26:36.32:0,36,1157	0/0:33,0:33:99:0,99,1551	0/0:20,0:20:60.18:0,60,926	0/0:15,0:15:45.14:0,45,697	0/0:25,0:25:75.26:0,75,1198	0/0:31,0:31:93.32:0,93,1486	0/0:23,0:23:69.22:0,69,1078	0/0:27,0:27:81.26:0,81,1270	0/0:26,0:26:78.27:0,78,1246	1/1:0,25:25:69.23:964,69,0	0/0:26,0:26:78.25:0,78,1208	0/0:33,0:31:99:0,99,1545	0/0:10,0:10:30.10:0,30,479
chr10	53293897	.	AGATGG	A	9145.99	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=16.431;DP=738;FS=17.651;HRun=0;HaplotypeScore=142.1988;InbreedingCoeff=0.9991;MQ=74.22;MQ0=0;MQRankSum=-11.866;QD=51.09;ReadPosRankSum=0.044;VQSLOD=4.1686;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,105,3119	0/0:13,0:13:39.13:0,39,1199	0/0:16,0:16:45.10:0,45,1339	0/0:20,0:20:47.08:0,47,1387	1/1:0,40:40:99:1724,102,0	1/1:2,33:35:90.31:1947,90,0	1/1:1,23:24:57.15:1164,57,0	0/0:35,0:35:99:0,99,2872	1/1:0,28:28:69.19:1486,69,0	0/0:31,0:31:90.24:0,90,2512	0/0:15,0:15:42.14:0,42,1300	0/0:32,0:32:96.33:0,96,3035	0/0:28,0:28:84.26:0,84,2448	1/1:0,26:26:66.23:1464,66,0	0/0:26,0:26:78.27:0,78,2464	0/0:35,0:35:39.41:0,39,2991	0/0:21,0:21:63.19:0,63,1951	0/0:24,0:24:69.24:0,69,2094	0/0:25,0:25:69.24:0,69,2080	0/0:39,0:39:99:0,117,3609	0/0:37,0:37:99:0,108,3356	0/0:29,0:29:87.30:0,87,2639	0/0:22,0:22:63.19:0,63,1835	0/0:18,0:18:54.19:0,54,1551	1/1:0,26:26:66.18:1361,66,0	0/0:29,0:29:87.30:0,87,2653	0/0:21,0:21:63.22:0,63,2031	0/0:7,0:7:21.07:0,21,678
chr10	53296959	.	TA	T	2777.62	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=12.618;DP=605;FS=5.499;HRun=9;HaplotypeScore=57.3671;InbreedingCoeff=0.9856;MQ=68.69;MQ0=0;MQRankSum=0.771;QD=21.87;ReadPosRankSum=3.880;VQSLOD=4.5217;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:60.14:0,60,669	0/0:7,0:7:18.05:0,18,207	0/0:10,0:10:10.11:0,10,197	0/0:9,0:9:15.04:0,15,173	1/1:1,29:30:81.03:741,81,0	1/1:0,20:20:57.03:522,57,0	1/1:3,13:16:36.02:329,36,0	0/0:31,0:31:81.21:0,81,907	1/1:0,12:12:33.02:302,33,0	0/0:34,0:34:93.26:0,93,1057	0/0:20,0:20:42.12:0,42,483	0/0:24,0:24:60.12:0,60,676	0/0:26,0:26:61.02:0,61,677	1/1:4,24:28:63.03:577,63,0	0/0:22,0:22:63.19:0,63,727	0/0:22,0:22:63.19:0,63,726	0/0:30,0:30:75.22:0,75,865	0/0:19,0:19:54.16:0,54,623	0/0:18,0:18:42.12:0,42,485	0/0:32,0:32:78.23:0,78,899	0/0:16,0:16:36.11:0,36,415	0/0:21,1:22:29.70:0,30,595	0/0:25,0:25:72.02:0,72,790	0/0:23,0:23:54.12:0,54,608	1/1:3,18:21:54.03:494,54,0	0/0:19,0:19:48.14:0,48,554	0/0:25,0:25:69.21:0,69,796	0/0:21,0:21:63.10:0,63,675
chr10	53297865	.	A	AT	4673.92	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=3.041;DP=761;FS=19.359;HRun=8;HaplotypeScore=97.5165;InbreedingCoeff=0.9992;MQ=78.77;MQ0=0;MQRankSum=0.073;QD=26.71;ReadPosRankSum=2.948;VQSLOD=3.5678;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:83.70:0,84,762	0/0:16,0:16:48.03:0,48,439	0/0:22,0:22:32.79:0,33,287	0/0:19,0:19:29.64:0,30,337	1/1:3,28:31:81.20:920,81,0	1/1:6,33:39:87.26:1004,87,0	1/1:5,17:22:48.14:554,48,0	0/0:35,0:35:81.01:0,81,741	1/1:3,17:20:51.15:589,51,0	0/0:35,0:35:84.02:0,84,765	0/0:22,0:22:57.02:0,57,517	0/0:21,0:21:57.03:0,57,522	0/0:26,0:26:75.03:0,75,682	1/1:5,30:36:87.09:984,87,0	0/0:50,0:50:99:0,129,1181	0/0:34,0:34:90.04:0,90,824	0/0:27,0:27:69.01:0,69,627	0/0:11,0:11:27.01:0,27,247	0/0:24,0:24:62.99:0,63,567	0/0:33,0:33:87.04:0,87,796	0/0:18,0:18:51.03:0,51,467	0/0:21,0:21:60.02:0,60,545	0/0:23,0:23:63.03:0,63,576	0/0:35,0:35:93.05:0,93,851	1/1:7,20:27:54.16:623,54,0	0/0:32,0:32:87.03:0,87,796	0/0:39,0:38:99:0,105,955	0/0:11,0:11:23.95:0,24,202
chr10	53298724	.	T	TC	6869.28	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-15.900;DP=724;FS=2.794;HRun=2;HaplotypeScore=63.6808;InbreedingCoeff=0.9995;MQ=88.84;MQ0=0;MQRankSum=-6.246;QD=40.41;ReadPosRankSum=1.706;VQSLOD=5.3279;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:54.17:0,54,669	0/0:11,0:11:33.10:0,33,409	0/0:35,0:35:84.26:0,84,1038	0/0:18,0:18:45.12:0,45,548	1/1:2,34:36:99:1468,102,0	1/1:1,34:35:99:1426,99,0	1/1:0,16:16:42.14:605,42,0	0/0:35,0:35:96.29:0,96,1180	1/1:0,30:30:84.28:1210,84,0	0/0:45,0:44:99:0,126,1534	0/0:18,0:18:48.15:0,48,595	0/0:23,0:23:57.18:0,57,706	0/0:24,0:24:66.21:0,66,818	1/1:0,29:29:81.27:1167,81,0	0/0:27,0:27:75.22:0,75,916	0/0:31,0:31:90.28:0,90,1116	0/0:22,0:22:54.17:0,54,669	0/0:11,0:11:24.05:0,24,283	0/0:26,0:26:69.22:0,69,855	0/0:33,0:33:93.27:0,93,1128	0/0:23,0:23:69.22:0,69,854	0/0:24,0:24:72.23:0,72,893	0/0:27,0:27:75.19:0,75,913	0/0:17,0:17:51.14:0,51,618	1/1:1,23:24:69.23:994,69,0	0/0:28,0:28:84.26:0,84,1041	0/0:39,0:39:99:0,111,1376	0/0:18,0:18:48.15:0,48,595
chr10	53299594	.	TTG	T	975.86	PASS	AB=0.984;AC=12;AF=0.214;AN=56;BaseQRankSum=6.366;DP=518;FS=11.598;HRun=0;HaplotypeScore=87.7039;InbreedingCoeff=0.3416;MQ=82.06;MQ0=10;MQRankSum=2.380;QD=7.28;ReadPosRankSum=1.506;VQSLOD=2.1487;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:77.93:0,78,1220	0/0:7,0:7:17.93:0,18,189	0/0:71,0:28:32.65:0,33,335	0/0:55,0:23:26.62:0,27,278	0/0:15,0:15:38.44:0,38,163	0/0:22,0:22:38.44:0,38,165	0/0:14,0:14:34.44:0,34,177	1/1:1,20:21:62.93:669,63,0	0/0:12,0:12:27.96:0,28,121	0/1:20,0:19:22.84:23,0,91	1/1:11,0:12:9.79:98,10,0	0/0:9,0:9:27.07:0,27,473	0/0:9,0:9:24.04:0,24,312	0/0:14,0:14:32.44:0,32,112	0/0:17,0:17:51.09:0,51,749	0/0:9,0:9:27.08:0,27,476	0/0:29,0:29:87.24:0,87,1453	0/0:27,0:27:80.63:0,81,1266	0/1:14,0:14:41.94:42,0,50	0/1:19,0:19:24.25:87,0,24	0/1:9,0:8:10.92:27,0,11	0/0:8,0:8:23.52:0,24,269	0/0:16,0:16:42.52:0,43,548	0/0:4,0:4:12.01:0,12,140	0/0:17,0:17:33.95:0,34,162	0/1:16,0:16:35.52:67,0,36	0/1:17,0:19:16.04:98,0,16	1/1:4,0:4:8.67:29,9,0
chr10	53299595	.	TGG	T	2745.91	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=0.410;DP=512;FS=10.381;HRun=10;HaplotypeScore=81.9521;InbreedingCoeff=0.9395;MQ=83.08;MQ0=10;MQRankSum=-0.133;QD=21.12;ReadPosRankSum=0.364;VQSLOD=1.9269;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:72.24:0,72,1100	0/0:7,0:7:15.05:0,15,233	0/0:72,0:29:0.18:0,0,335	0/0:52,0:23:22.88:0,23,283	0/0:2,0:15:30.49:0,30,105	0/0:2,0:22:30.68:0,31,106	0/0:3,0:13:21.34:0,21,75	1/1:21,0:21:23.76:170,24,0	0/0:1,0:12:26.71:0,27,106	1/1:4,14:19:45.03:468,45,0	1/1:1,11:12:33.07:354,33,0	0/0:10,0:10:27.09:0,27,425	0/0:9,0:9:15.01:0,15,209	0/0:0,0:14:30.83:0,31,107	0/0:17,0:17:39.12:0,39,590	0/0:9,0:9:27.09:0,27,425	0/0:28,0:28:78.25:0,78,1188	0/0:26,0:27:68.59:0,69,1016	1/1:2,11:13:30.06:324,30,0	1/1:1,17:18:48.11:528,48,0	1/1:6,4:9:18.04:200,18,0	0/0:7,0:8:14.41:0,14,196	0/0:16,0:16:30.10:0,30,467	0/0:4,0:4:12.03:0,12,164	0/0:3,0:17:23.71:0,24,83	1/1:1,13:14:39.10:432,39,0	1/1:4,14:18:33.01:347,33,0	1/1:0,4:4:12.03:134,12,0
chr10	53300036	.	A	ATC	9932.93	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=9.095;DP=548;FS=6.509;HRun=0;HaplotypeScore=77.3441;InbreedingCoeff=0.9945;MQ=79.15;MQ0=0;MQRankSum=-3.137;QD=51.20;ReadPosRankSum=0.279;VQSLOD=5.4676;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:81.25:0,81,1211	0/0:15,0:15:42.14:0,42,643	0/0:16,0:16:46.18:0,46,625	0/0:11,0:11:24.08:0,24,339	1/1:0,13:14:36.12:695,36,0	1/1:3,24:28:69.24:1333,69,0	1/1:2,24:26:69.24:1333,69,0	1/1:3,15:19:57.16:1020,57,0	1/1:0,9:10:30.10:577,30,0	0/0:25,0:25:75.25:0,75,1147	0/0:12,0:12:36.12:0,36,551	0/0:26,0:26:72.24:0,72,1102	0/0:15,0:15:45.15:0,45,688	1/1:2,22:24:60.21:1158,60,0	0/0:15,0:15:45.15:0,45,689	0/0:21,0:21:60.19:0,60,898	1/1:1,28:29:81.28:1565,81,0	1/1:1,20:23:63.22:1208,63,0	0/0:10,0:10:27.05:0,27,387	0/0:11,0:11:30.10:0,30,459	0/0:49,0:49:99:0,141,2159	0/0:12,0:12:33.11:0,33,502	0/0:19,0:19:51.17:0,51,780	0/0:29,0:29:87.25:0,87,1306	1/1:1,19:21:54.19:1043,54,0	0/0:16,0:16:45.15:0,45,689	0/0:18,0:18:51.14:0,51,737	0/0:4,0:4:12.04:0,12,184
chr10	53300619	.	C	CT	597.39	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=-0.587;DP=764;FS=0.664;HRun=8;HaplotypeScore=174.0369;InbreedingCoeff=0.6783;MQ=59.43;MQ0=3;MQRankSum=-2.926;QD=14.93;ReadPosRankSum=-7.069;VQSLOD=0.1028;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:43:99:0,113,1021	0/0:12,0:12:27:0,27,247	0/0:22,0:16:22.47:0,22,248	0/0:19,0:15:28.57:0,29,236	0/0:38,0:38:25.48:0,25,304	0/0:21,0:21:19.05:0,19,133	0/0:27,0:27:31.80:0,32,230	1/1:4,21:25:60.18:691,60,0	0/1:15,0:15:7.19:7,0,84	0/0:37,0:37:99:0,102,929	0/0:16,0:16:42.02:0,42,384	0/0:22,0:22:59.99:0,60,538	0/0:24,0:25:62.07:0,62,555	0/0:21,0:21:18.58:0,19,169	0/0:25,0:25:69.03:0,69,631	0/0:23,0:23:56.98:0,57,508	0/0:48,0:48:99:0,114,1043	0/0:19,0:18:43.37:0,43,374	0/0:21,0:21:51.02:0,51,467	0/0:38,0:38:96.04:0,96,878	0/0:23,0:23:60.01:0,60,545	0/0:28,0:28:69.03:0,69,631	0/0:32,0:32:90.04:0,90,819	0/0:42,0:42:99:0,108,982	0/0:33,0:33:49.73:0,50,273	0/0:34,0:34:96.04:0,96,879	0/0:40,0:40:78.01:0,78,709	0/0:15,0:15:44.82:0,45,397
chr10	53300628	.	G	GTT	4576.69	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=16.890;DP=775;FS=5.042;HRun=8;HaplotypeScore=181.9696;InbreedingCoeff=0.9989;MQ=59.79;MQ0=4;MQRankSum=-14.702;QD=28.78;ReadPosRankSum=-1.656;VQSLOD=2.7486;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,120,1703	0/0:14,0:14:42.13:0,42,596	0/0:28,0:16:22.76:0,23,381	0/0:33,0:20:24.36:0,24,390	1/1:33,9:42:95.30:1038,95,0	1/1:12,8:20:44.57:632,45,0	1/1:24,3:27:52.73:622,53,0	0/0:24,0:24:69:0,69,674	1/1:10,5:16:29.15:450,29,0	0/0:39,0:39:99:0,111,1556	0/0:17,0:17:48.16:0,48,696	0/0:21,0:21:60.17:0,60,838	0/0:22,0:22:66.19:0,66,921	1/1:17,5:22:50.79:636,51,0	0/0:27,0:27:77.98:0,78,1085	0/0:20,0:20:57.19:0,57,833	0/0:47,0:47:99:0,120,1757	0/0:18,0:17:47.59:0,48,644	0/0:20,0:20:57.18:0,57,811	0/0:36,0:36:99:0,102,1475	0/0:21,0:21:60.17:0,60,854	0/0:27,0:27:75.25:0,75,1096	0/0:35,0:35:96.31:0,96,1379	0/0:39,0:39:99:0,114,1587	1/1:17,15:32:85.53:1199,86,0	0/0:35,0:35:99:0,105,1541	0/0:33,0:33:84.27:0,84,1212	0/0:15,0:15:44.75:0,45,600
chr10	53300630	.	TG	T	3844.25	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=18.073;DP=779;FS=4.516;HRun=1;HaplotypeScore=167.5750;InbreedingCoeff=0.9984;MQ=60.30;MQ0=4;MQRankSum=-16.119;QD=24.80;ReadPosRankSum=-0.907;VQSLOD=3.1967;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,126,1922	0/0:14,0:14:42.14:0,42,666	0/0:32,0:18:18.40:0,18,456	0/0:36,0:21:37.45:0,37,447	1/1:23,17:42:99:1000,104,0	1/1:14,5:19:47.78:448,48,0	1/1:12,12:25:64.74:600,65,0	0/0:25,0:25:72.20:0,72,1057	1/1:11,4:15:40.54:362,41,0	0/0:39,0:39:99:0,117,1826	0/0:18,0:18:54.16:0,54,831	0/0:21,0:21:63.18:0,63,941	0/0:22,0:22:66.21:0,66,1009	1/1:10,11:21:53.23:521,53,0	0/0:28,0:28:84.20:0,84,1273	0/0:20,0:20:60.20:0,60,946	0/0:46,0:46:99:0,120,1911	0/0:19,0:18:51.13:0,51,775	0/0:20,0:20:60.17:0,60,896	0/0:35,0:35:99:0,105,1647	0/0:21,0:21:63.20:0,63,977	0/0:28,0:28:84.19:0,84,1271	0/0:35,0:35:99:0,105,1623	0/0:38,0:38:99:0,114,1765	1/1:20,12:33:86.50:914,87,0	0/0:36,0:36:99:0,108,1706	0/0:32,0:32:84.20:0,84,1341	0/0:15,0:15:38.01:0,38,629
chr10	53300631	.	G	GTTTT	4616.11	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=17.861;DP=784;FS=7.812;HRun=2;HaplotypeScore=211.6736;InbreedingCoeff=0.9750;MQ=60.94;MQ0=4;MQRankSum=-16.396;QD=29.59;ReadPosRankSum=-1.043;VQSLOD=1.2344;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,123,2139	0/0:14,0:14:42.14:0,42,775	0/0:32,0:19:5.19:0,5,412	0/0:38,0:21:22.40:0,22,499	1/1:31,9:41:95.62:950,96,0	1/1:11,8:19:48.58:705,49,0	1/1:23,3:26:52.90:542,53,0	0/0:24,0:24:66.68:0,67,1134	1/1:11,5:16:32.21:467,32,0	0/0:39,0:39:99:0,117,2071	0/0:18,0:18:54.15:0,54,936	0/0:21,0:21:60.17:0,60,1039	0/0:21,0:21:63.19:0,63,1136	1/1:16,5:21:54.15:660,54,0	0/0:28,0:28:81.23:0,81,1406	0/0:20,0:20:57.18:0,57,1034	0/0:46,0:46:99:0,120,2205	0/0:19,0:18:50.49:0,50,791	0/0:20,0:20:51.14:0,51,882	0/0:37,0:37:99:0,102,1811	0/0:21,0:21:63.18:0,63,1096	0/0:28,0:28:84.15:0,84,1396	0/0:36,0:36:99:0,102,1766	0/0:38,0:38:99:0,108,1974	1/1:18,15:33:77.56:1293,78,0	0/0:36,0:36:99:0,108,1988	0/0:33,0:33:84.29:0,84,1559	0/0:15,0:15:42.04:0,42,714
chr10	53300633	.	TG	T	3667.56	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=17.925;DP=799;FS=6.477;HRun=1;HaplotypeScore=169.1698;InbreedingCoeff=0.9958;MQ=61.28;MQ0=5;MQRankSum=-16.824;QD=23.07;ReadPosRankSum=0.651;VQSLOD=3.2691;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,123,1935	0/0:14,0:14:42.14:0,42,669	0/0:35,0:20:30.37:0,30,499	0/0:40,4:22:31.77:0,32,440	1/1:29,14:43:99:947,102,0	1/1:13,6:19:51.23:491,51,0	1/1:16,10:26:59.87:615,60,0	0/0:24,0:24:69.22:0,69,1047	1/1:9,8:17:39.28:394,39,0	0/0:39,0:39:99:0,117,1837	0/0:18,0:18:54.18:0,54,851	0/0:21,0:21:63.21:0,63,974	0/0:22,0:22:66.18:0,66,1001	1/1:16,6:22:56.62:483,57,0	0/0:30,0:30:87.23:0,87,1297	0/0:21,0:21:60.19:0,60,930	0/0:47,0:47:99:0,123,1915	0/0:20,0:19:54.18:0,54,834	0/0:17,0:17:51.17:0,51,804	0/0:39,0:39:99:0,114,1689	0/0:21,0:21:63.21:0,63,995	0/0:28,0:28:84.27:0,84,1297	0/0:36,0:36:99:0,108,1636	0/0:38,0:38:99:0,114,1763	1/1:28,4:32:84.06:737,84,0	0/0:36,0:36:99:0,108,1721	0/0:33,0:33:87.21:0,87,1383	0/0:14,1:15:14.06:0,14,570
chr10	53300634	.	G	GTT	4369.48	PASS	AB=0.979;AC=13;AF=0.232;AN=56;BaseQRankSum=16.989;DP=802;FS=9.219;HRun=2;HaplotypeScore=184.3069;InbreedingCoeff=0.8923;MQ=61.88;MQ0=6;MQRankSum=-14.678;QD=21.11;ReadPosRankSum=0.428;VQSLOD=2.2150;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,117,1705	0/0:14,0:14:42.14:0,42,617	0/0:36,0:20:16.22:0,16,408	0/1:43,0:23:39.44:39,0,353	1/1:34,10:44:80.54:931,81,0	1/1:11,8:19:49.04:636,49,0	1/1:23,3:26:52.71:605,53,0	0/0:25,0:25:66.65:0,67,893	1/1:12,5:17:37.12:440,37,0	0/0:39,0:39:99:0,117,1646	0/0:18,0:18:54.17:0,54,771	0/0:21,0:21:60.20:0,60,869	0/0:23,0:23:63.19:0,63,904	1/1:17,5:22:45.43:572,45,0	0/0:31,0:31:84.24:0,84,1183	0/0:21,0:21:60.19:0,60,862	0/0:46,0:46:99:0,120,1740	0/0:20,0:19:50.27:0,50,671	0/0:17,0:17:48.16:0,48,695	0/0:37,0:37:99:0,108,1516	0/0:21,0:21:60.18:0,60,857	0/0:28,0:28:78.25:0,78,1121	0/0:36,0:36:99:0,105,1483	0/0:38,0:38:99:0,114,1633	1/1:17,15:33:83.68:1147,84,0	0/0:37,0:37:99:0,108,1567	0/0:33,0:33:87.29:0,87,1273	0/0:13,0:13:12.27:0,12,503
chr10	53300636	.	TG	T	1513.30	PASS	AB=0.805;AC=8;AF=0.143;AN=56;BaseQRankSum=12.942;DP=805;FS=0.000;HRun=1;HaplotypeScore=175.3783;InbreedingCoeff=0.3745;MQ=61.13;MQ0=7;MQRankSum=-12.873;QD=9.64;ReadPosRankSum=-2.379;VQSLOD=0.4752;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,113,1735	0/0:14,0:14:42.14:0,42,639	0/0:36,1:19:29.11:0,29,499	0/0:48,1:22:37.63:0,38,463	0/1:29,14:43:99:461,0,107	0/1:14,4:18:51.74:127,0,52	1/1:17,8:25:26.02:368,26,0	0/0:24,0:24:69.13:0,69,961	0/1:13,3:16:31:98,0,31	0/0:39,0:39:99:0,117,1711	0/0:18,0:18:54.17:0,54,790	0/0:22,0:22:66.19:0,66,949	0/0:23,0:23:69.21:0,69,1016	1/1:11,11:22:6.10:314,6,0	0/0:31,0:31:90.28:0,90,1304	0/0:21,0:21:63.21:0,63,941	0/0:45,0:45:99:0,120,1803	0/0:20,0:19:53.55:0,54,734	0/0:19,0:19:57.04:0,57,740	0/0:36,0:36:99:0,108,1596	0/0:20,0:20:60.17:0,60,867	0/0:29,0:29:84.22:0,84,1178	0/0:36,0:36:99:0,108,1586	0/0:39,0:39:99:0,117,1706	0/1:25,8:33:99:288,0,110	0/0:37,0:37:99:0,111,1639	0/0:33,0:33:87.18:0,87,1279	0/0:13,0:13:37.93:0,38,536
chr10	53300666	.	GT	G	5504.85	PASS	AB=0.949;AC=23;AF=0.411;AN=56;BaseQRankSum=2.200;DP=823;FS=1.731;HRun=10;HaplotypeScore=169.0005;InbreedingCoeff=0.9234;MQ=64.84;MQ0=6;MQRankSum=2.268;QD=16.78;ReadPosRankSum=0.638;VQSLOD=3.4478;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,132,1393	0/0:15,0:15:39.09:0,39,422	0/1:35,2:18:4.65:5,0,125	0/0:48,2:22:11.99:0,12,102	0/0:42,1:43:33.70:0,34,539	0/0:20,0:20:41.94:0,42,413	0/0:28,0:29:56.94:0,57,589	1/1:12,9:20:50.92:428,51,0	0/0:17,1:18:16.05:0,16,393	1/1:8,25:33:49.87:593,50,0	1/1:2,18:21:56.02:474,56,0	0/0:25,0:25:69.15:0,69,738	0/0:20,0:20:51.03:0,51,520	0/0:22,1:23:21.93:0,22,415	0/0:35,1:38:82.15:0,82,1115	0/0:24,0:24:40.21:0,40,651	1/1:4,42:46:99:886,102,0	1/1:2,21:23:44.01:502,44,0	1/1:4,15:18:18.88:359,19,0	1/1:5,36:41:69.82:766,70,0	1/1:4,10:14:29.98:260,30,0	0/0:24,0:27:62.81:0,63,643	0/0:32,0:34:93.01:0,93,973	0/0:42,0:42:99:0,108,1187	0/0:34,0:34:59.95:0,60,602	1/1:7,27:34:44.91:618,45,0	1/1:4,28:32:38.49:496,38,0	1/1:2,5:7:6.49:119,6,0
chr10	53301362	.	A	AT	3790.51	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=5.578;DP=554;FS=4.215;HRun=7;HaplotypeScore=66.2029;InbreedingCoeff=0.8948;MQ=65.49;MQ0=0;MQRankSum=0.703;QD=29.61;ReadPosRankSum=0.676;VQSLOD=4.2585;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:33.04:0,33,319	0/0:10,0:10:27.04:0,27,261	0/0:6,0:6:12:0,12,111	0/1:4,0:3:13.69:14,0,21	1/1:6,38:44:99:1249,105,0	1/1:1,22:23:60.18:725,60,0	1/1:0,5:5:15.05:181,15,0	0/0:35,0:35:84.11:0,84,807	1/1:3,10:13:27.08:326,27,0	0/0:30,0:30:87.14:0,87,840	0/0:27,0:27:72.07:0,72,678	0/0:8,0:8:24.04:0,24,232	0/0:14,0:14:42.07:0,42,405	1/1:3,18:21:54.16:643,54,0	0/0:16,0:16:48.08:0,48,464	0/0:26,0:26:75.10:0,75,718	0/0:28,0:28:75.08:0,75,715	0/0:21,0:21:63.10:0,63,608	0/0:19,0:19:48.07:0,48,463	0/0:31,0:31:90.14:0,90,868	0/0:14,0:14:39.06:0,39,377	0/0:18,0:18:51.08:0,51,492	0/0:21,0:21:63.10:0,63,608	0/0:13,0:13:39.05:0,39,370	1/1:0,18:18:54.17:652,54,0	0/0:24,0:24:72.12:0,72,695	0/0:34,0:33:87.12:0,87,835	0/0:16,0:16:45.07:0,45,434
chr10	53302489	.	AAC	A	351.79	PASS	AB=0.950;AC=23;AF=0.479;AN=48;BaseQRankSum=4.616;DP=588;FS=3.300;HRun=0;HaplotypeScore=105.9247;InbreedingCoeff=0.0674;MQ=59.41;MQ0=26;MQRankSum=-3.750;QD=1.06;ReadPosRankSum=-1.757;VQSLOD=1.9960;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:44,0:44:31.46:31,0,108	0/1:8,1:8:22.70:23,0,78	./.	./.	0/0:23,0:24:21.06:0,21,275	0/0:22,4:25:15.02:0,15,174	0/1:28,5:31:42.37:42,0,148	0/0:32,0:30:1.77:0,2,4	0/1:24,0:24:66.22:66,0,124	1/1:27,3:29:8.75:72,9,0	1/1:13,0:16:8.38:39,8,0	0/0:13,1:12:8.45:0,8,130	0/0:13,0:13:3.01:0,3,35	0/0:14,0:13:13.58:0,14,160	0/1:15,3:18:22.70:23,0,59	0/1:12,0:10:7.66:8,0,107	0/1:22,0:21:5.09:5,0,44	1/1:15,3:16:3:32,3,0	./.	1/1:10,0:18:8.52:42,9,0	./.	0/0:17,0:16:5.92:0,6,41	0/1:14,0:14:15.07:15,0,59	0/0:22,0:20:6.02:0,6,85	0/1:23,2:23:13.68:14,0,38	1/1:18,0:20:8.52:42,9,0	1/1:12,0:13:2.04:6,2,0	1/1:6,1:8:5.85:46,6,0
chr10	53302543	.	CCA	C	865.01	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.252;DP=510;FS=23.077;HRun=0;HaplotypeScore=79.6902;InbreedingCoeff=0.9307;MQ=48.42;MQ0=31;MQRankSum=-1.072;QD=29.83;ReadPosRankSum=-2.821;VQSLOD=2.1527;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:24:44.94:0,45,637	0/0:7,0:7:20.98:0,21,308	0/0:25,0:7:9.07:0,9,333	0/0:25,0:9:27.03:0,27,334	0/0:20,0:19:39.11:0,39,640	0/0:20,0:20:24.06:0,24,362	0/0:31,0:30:58.51:0,59,909	1/1:4,25:25:69.23:960,69,0	0/0:18,0:18:50.83:0,51,759	0/0:21,0:20:55.04:0,55,869	0/0:15,0:15:29.95:0,30,401	0/0:19,0:17:44.72:0,45,671	0/0:11,0:11:24.08:0,24,396	0/0:15,0:14:33.11:0,33,564	0/0:16,0:15:34.36:0,34,528	0/0:11,0:11:30.10:0,30,509	0/0:23,0:19:36.08:0,36,505	0/0:14,0:12:26.76:0,27,369	0/0:14,0:12:36.12:0,36,612	0/0:17,0:17:35.85:0,36,464	0/0:21,0:17:33.11:0,33,543	0/0:19,0:18:30.08:0,30,438	0/0:13,0:12:30.09:0,30,488	0/0:18,0:16:33.11:0,33,549	0/0:18,0:16:29.99:0,30,458	0/0:19,0:18:50.78:0,51,770	0/0:12,0:11:24.08:0,24,349	0/0:13,0:13:29.45:0,29,404
chr10	53302979	.	G	GGA	8641.84	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=14.022;DP=716;FS=0.329;HRun=0;HaplotypeScore=121.9656;InbreedingCoeff=0.9996;MQ=73.44;MQ0=0;MQRankSum=-6.971;QD=47.74;ReadPosRankSum=0.511;VQSLOD=5.6252;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,114,1744	0/0:10,0:10:30.07:0,30,435	0/0:25,0:21:57.19:0,57,841	0/0:27,0:26:57.25:0,57,973	1/1:5,19:24:48.15:883,48,0	1/1:4,21:25:57.18:1051,57,0	1/1:1,23:24:63.22:1210,63,0	1/1:4,19:23:63.21:1186,63,0	1/1:2,24:26:72.24:1346,72,0	0/0:30,0:30:81.26:0,81,1214	0/0:18,0:18:54.18:0,54,827	0/0:17,0:17:45.14:0,45,668	0/0:21,0:21:63.20:0,63,943	1/1:9,29:38:99:1982,111,0	0/0:33,0:33:99:0,99,1497	0/0:31,0:31:93.30:0,93,1402	0/0:35,0:35:99:0,102,1560	0/0:9,0:9:27.07:0,27,390	0/0:23,0:23:66.22:0,66,997	0/0:32,0:32:96.30:0,96,1429	0/0:29,0:29:87.23:0,87,1269	0/0:33,0:33:93.32:0,93,1422	0/0:31,0:31:93.30:0,93,1394	0/0:27,0:27:78.26:0,78,1194	1/1:1,20:21:51.17:984,51,0	0/0:26,0:26:75.24:0,75,1127	0/0:26,0:25:72.24:0,72,1100	0/0:10,0:10:30.10:0,30,450
chr10	53303064	.	A	AAG	8102.45	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-0.139;DP=671;FS=1.489;HRun=0;HaplotypeScore=86.1936;InbreedingCoeff=0.9990;MQ=59.59;MQ0=1;MQRankSum=0.282;QD=47.11;ReadPosRankSum=-2.272;VQSLOD=5.1377;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,147,2086	0/0:7,0:7:21.07:0,21,301	0/0:15,0:12:30.10:0,30,425	0/0:20,0:19:42.17:0,42,674	1/1:1,26:28:75.17:1316,75,0	1/1:1,20:21:54.18:972,54,0	1/1:1,28:29:69.24:1263,69,0	1/1:0,20:22:66.16:1131,66,0	1/1:2,18:20:51.17:935,51,0	0/0:24,0:24:72.23:0,72,1016	0/0:19,0:19:57.17:0,57,797	0/0:25,0:25:69.21:0,69,954	0/0:21,0:21:60.19:0,60,842	1/1:2,21:23:60.20:1075,60,0	0/0:17,0:17:48.14:0,48,669	0/0:29,0:29:78.25:0,78,1099	0/0:31,0:31:84.28:0,84,1199	0/0:24,0:24:69.20:0,69,967	0/0:20,0:20:60.19:0,60,842	0/0:15,0:15:42.13:0,42,584	0/0:40,0:40:99:0,111,1544	0/0:17,0:17:39.13:0,39,558	0/0:22,0:22:63.21:0,63,900	0/0:42,0:42:99:0,123,1719	1/1:0,29:29:78.27:1410,78,0	0/0:20,0:20:60.20:0,60,860	0/0:30,0:29:87.28:0,87,1229	0/0:9,0:9:27.09:0,27,382
chr10	53303318	.	C	CT	3999.55	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=14.757;DP=514;FS=29.188;HRun=6;HaplotypeScore=82.0572;InbreedingCoeff=0.9794;MQ=67.10;MQ0=0;MQRankSum=-7.492;QD=31.49;ReadPosRankSum=-0.386;VQSLOD=1.5629;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:60.11:0,60,604	0/0:5,0:5:12.03:0,12,122	0/0:17,0:14:24.49:0,24,233	0/0:8,0:8:20.97:0,21,185	1/1:3,21:24:63.16:767,63,0	1/1:4,15:19:51.16:635,51,0	1/1:2,5:7:15.05:189,15,0	1/1:2,17:19:51.16:638,51,0	1/1:2,9:11:30.10:384,30,0	0/0:26,0:26:72.15:0,72,728	0/0:29,0:29:87.19:0,87,883	0/0:16,0:16:48.11:0,48,490	0/0:19,0:19:54.10:0,54,539	1/1:3,14:17:39.12:490,39,0	0/0:19,0:19:54.10:0,54,538	0/0:24,0:24:69.14:0,69,697	0/0:32,0:32:90.17:0,90,903	0/0:17,0:17:45.10:0,45,459	0/0:12,0:12:33.07:0,33,337	0/0:25,0:25:75.17:0,75,765	0/0:3,0:3:9.02:0,9,92	0/0:19,0:19:51.12:0,51,520	0/0:34,0:34:90.17:0,90,904	0/0:14,0:14:39.08:0,39,393	1/1:7,23:30:75.15:896,75,0	0/0:18,0:18:51.09:0,51,509	0/0:20,0:20:54.09:0,54,538	0/0:8,0:8:24.05:0,24,244
chr10	53303387	.	TACA	T	3117.29	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=12.811;DP=444;FS=21.193;HRun=0;HaplotypeScore=83.4112;InbreedingCoeff=0.9623;MQ=78.86;MQ0=0;MQRankSum=-12.260;QD=42.13;ReadPosRankSum=-1.338;VQSLOD=2.7825;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:33.11:0,33,813	0/0:10,0:10:30.09:0,30,690	0/0:18,0:18:52.39:0,52,977	0/0:5,0:5:12.04:0,12,222	1/1:1,16:17:42.14:696,42,0	1/1:1,12:13:39.08:643,39,0	1/1:0,3:3:9.03:156,9,0	1/1:0,15:15:39.12:622,39,0	1/1:0,3:3:6.02:100,6,0	0/0:25,0:25:75.25:0,75,1766	0/0:28,0:28:81.28:0,81,1866	0/0:13,0:13:39.13:0,39,961	0/0:18,0:18:54.17:0,54,1207	1/1:0,6:6:18.06:309,18,0	0/0:16,0:16:48.16:0,48,1182	0/0:18,0:18:54.19:0,54,1293	0/0:28,0:28:81.23:0,81,1810	0/0:17,0:17:48.16:0,48,1119	0/0:10,0:10:30.10:0,30,739	0/0:22,0:22:66.23:0,66,1613	0/0:9,0:9:27.09:0,27,665	0/0:20,0:20:60.20:0,60,1395	0/0:32,0:32:96.30:0,96,2157	0/0:12,0:12:33.11:0,33,762	1/1:0,17:17:47.19:784,47,0	0/0:22,0:22:66.23:0,66,1627	0/0:24,0:24:72.23:0,72,1709	0/0:12,0:12:36.12:0,36,886
chr10	53303392	.	ACAG	A	2953.42	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=13.059;DP=441;FS=16.269;HRun=0;HaplotypeScore=84.3587;InbreedingCoeff=0.9577;MQ=79.13;MQ0=0;MQRankSum=-12.355;QD=38.36;ReadPosRankSum=-2.189;VQSLOD=2.9616;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:36.12:0,36,882	0/0:11,0:11:33.11:0,33,801	0/0:19,0:19:45.34:0,45,943	0/0:5,0:5:6.02:0,6,122	1/1:1,16:17:48.07:697,48,0	1/1:1,12:13:39.10:610,39,0	1/1:0,3:3:9.03:147,9,0	1/1:2,12:14:30.57:496,31,0	1/1:2,3:5:9.03:132,9,0	0/0:25,0:25:75.26:0,75,1821	0/0:26,0:26:75.24:0,75,1798	0/0:14,0:14:42.14:0,42,1006	0/0:16,0:16:48.16:0,48,1104	1/1:1,6:7:18.06:291,18,0	0/0:16,0:16:48.16:0,48,1177	0/0:19,0:19:57.20:0,57,1373	0/0:25,0:25:75.26:0,75,1801	0/0:16,0:16:45.15:0,45,1094	0/0:12,0:12:36.09:0,36,744	0/0:22,0:22:66.23:0,66,1627	0/0:9,0:9:27.09:0,27,666	0/0:18,0:18:54.19:0,54,1331	0/0:29,0:29:87.30:0,87,2118	0/0:10,0:10:27.09:0,27,666	1/1:1,17:18:48.63:772,49,0	0/0:23,0:23:69.24:0,69,1631	0/0:25,0:25:75.24:0,75,1792	0/0:12,0:12:36.12:0,36,887
chr10	53308310	.	ATG	A	828.25	PASS	AB=0.877;AC=18;AF=0.346;AN=52;BaseQRankSum=4.634;DP=713;FS=9.579;HRun=0;HaplotypeScore=94.9887;InbreedingCoeff=-0.0180;MQ=62.00;MQ0=13;MQRankSum=-1.113;QD=2.55;ReadPosRankSum=2.453;VQSLOD=0.9082;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:55,1:56:2.15:0,2,370	0/0:11,0:11:12.40:0,12,134	./.	./.	0/1:17,9:26:12.94:52,0,13	1/1:24,2:26:4.20:169,4,0	0/1:10,5:15:29.78:97,0,30	0/0:24,0:24:2.94:0,3,18	0/1:20,8:28:28.92:139,0,29	0/1:23,0:23:18:18,0,146	0/1:20,0:20:13.70:14,0,319	0/0:24,0:24:2.37:0,2,350	0/0:19,0:36:17.98:0,18,153	1/1:18,4:22:23.83:215,24,0	0/0:19,4:23:20.59:0,21,268	0/1:19,5:24:33.69:34,0,289	1/1:13,0:24:11.11:55,11,0	1/1:8,0:11:2.84:14,3,0	0/0:19,0:19:9.78:0,10,80	0/0:25,0:25:12.79:0,13,291	0/0:36,0:36:14.92:0,15,142	0/1:35,0:35:25.28:25,0,486	0/1:15,0:15:9.02:9,0,143	0/0:26,0:26:4.29:0,4,456	0/1:13,7:21:67.49:124,0,67	0/0:26,0:26:14.08:0,14,172	0/1:30,0:31:20.81:21,0,339	0/0:8,0:8:6.96:0,7,90
chr10	53310323	.	TACGC	T	1975.33	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=-0.985;DP=549;FS=8.028;HRun=0;HaplotypeScore=116.0554;InbreedingCoeff=0.8468;MQ=59.84;MQ0=6;MQRankSum=1.032;QD=12.27;ReadPosRankSum=-0.627;VQSLOD=2.6865;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:51.58:0,52,904	0/0:5,0:5:11.88:0,12,116	0/0:30,0:17:26.61:0,27,323	0/0:30,0:27:26.35:0,26,319	0/0:23,0:23:42.84:0,43,562	0/0:17,0:17:16.32:0,16,517	0/0:22,0:21:41.86:0,42,474	1/1:31,0:31:68.96:605,69,0	0/0:18,0:18:39:0,39,700	1/1:21,1:22:36.20:320,36,0	1/1:15,4:19:16.94:250,17,0	0/0:11,0:11:8:0,8,357	0/0:8,0:8:21.01:0,21,294	0/0:20,0:20:38.84:0,39,655	0/0:22,0:22:53.80:0,54,724	0/0:17,0:17:29.35:0,29,471	0/0:28,0:26:1.42:0,1,261	0/0:16,0:16:31.13:0,31,254	1/1:10,0:10:9.32:159,9,0	1/1:24,0:24:48.20:383,48,0	0/1:13,0:13:0:0,0,0	0/0:9,0:9:24:0,24,472	0/0:19,0:19:41.84:0,42,602	0/0:35,0:35:74.48:0,74,1052	0/0:26,0:26:50.95:0,51,785	1/1:20,1:21:13.78:307,14,0	1/1:14,2:16:7.30:107,7,0	1/1:5,0:5:0.18:32,0,0
chr10	53310330	.	GCACGCACA	G	1110.62	PASS	AB=0.945;AC=8;AF=0.143;AN=56;BaseQRankSum=-4.260;DP=560;FS=2.442;HRun=0;HaplotypeScore=160.0713;InbreedingCoeff=0.1554;MQ=58.91;MQ0=9;MQRankSum=1.463;QD=7.77;ReadPosRankSum=-2.743;VQSLOD=1.8180;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:35:77.77:0,78,1637	0/0:5,0:5:11.88:0,12,165	0/0:29,0:16:26.69:0,27,330	0/0:25,0:22:26.53:0,27,357	0/0:20,0:20:45.89:0,46,1034	0/0:18,0:17:47.90:0,48,1025	0/0:19,0:18:44.99:0,45,914	1/1:25,4:28:65.08:626,65,0	0/0:17,0:17:39.05:0,39,1110	0/1:22,0:22:99:126,0,330	0/1:23,1:23:51.30:51,0,315	0/0:12,0:12:30.05:0,30,845	0/0:10,0:10:27.06:0,27,690	0/0:19,0:19:41.96:0,42,1122	0/0:25,0:25:59.69:0,60,1394	0/0:15,0:15:32.87:0,33,856	0/0:28,0:26:47.96:0,48,872	0/0:14,0:14:24.92:0,25,610	0/1:9,0:10:99:145,0,129	0/1:28,0:28:99:143,0,660	0/0:16,0:16:0.44:0,0,1	0/0:12,0:12:33.04:0,33,1018	0/0:21,0:21:47.96:0,48,1229	0/0:36,0:36:80.73:0,81,1888	0/0:22,0:22:53.99:0,54,1308	0/1:24,0:24:99:144,0,473	0/0:18,0:17:18.39:0,18,217	0/1:4,0:5:15.94:16,0,101
chr10	53310332	.	ACG	A	3184.97	PASS	AB=0.872;AC=21;AF=0.375;AN=56;BaseQRankSum=1.343;DP=569;FS=5.267;HRun=0;HaplotypeScore=96.0610;InbreedingCoeff=0.6735;MQ=58.42;MQ0=10;MQRankSum=2.589;QD=13.11;ReadPosRankSum=-0.568;VQSLOD=3.1249;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:37:54.78:0,55,739	0/1:6,0:6:1.16:1,0,66	0/0:30,0:16:26.61:0,27,323	0/0:24,0:21:26.20:0,26,319	0/0:18,0:18:30.59:0,31,391	0/0:18,0:17:13.08:0,13,431	0/0:18,0:17:23.18:0,23,396	1/1:30,0:29:64.17:599,64,0	0/0:17,0:17:38.99:0,39,506	1/1:3,18:21:53.45:457,53,0	1/1:7,17:23:32.64:338,33,0	0/0:15,0:15:4.95:0,5,288	0/1:14,0:14:9.84:10,0,209	0/0:18,0:18:25.99:0,26,509	0/0:23,0:23:38.05:0,38,579	0/1:10,3:13:14.61:15,0,302	0/1:27,0:25:43.88:44,0,112	0/0:16,0:16:15.90:0,16,210	1/1:9,0:9:17.97:203,18,0	1/1:25,7:31:40.09:792,40,0	0/1:3,14:16:0.05:0,0,0	0/0:12,0:12:32.99:0,33,447	0/0:21,0:21:34.77:0,35,516	0/0:37,0:37:47.76:0,48,837	0/0:21,0:21:53.91:0,54,644	1/1:4,20:24:45.89:600,46,0	1/1:4,16:19:17.64:218,18,0	1/1:2,4:6:9.01:108,9,0
chr10	53310334	.	GCA	G	985.72	PASS	AB=0.948;AC=25;AF=0.481;AN=52;BaseQRankSum=5.721;DP=589;FS=4.358;HRun=0;HaplotypeScore=106.6066;InbreedingCoeff=-0.2122;MQ=56.80;MQ0=14;MQRankSum=0.937;QD=2.45;ReadPosRankSum=2.240;VQSLOD=1.6645;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:37,2:41:40.78:41,0,356	1/1:6,0:6:3:31,3,0	./.	./.	0/1:17,1:18:44.76:45,0,129	0/1:16,1:17:67.70:68,0,212	0/1:15,2:16:44.87:45,0,147	0/0:28,0:27:3.82:0,4,19	0/0:18,0:18:24.03:0,24,267	1/1:20,0:20:5.41:25,5,0	1/1:27,1:26:7.81:154,8,0	0/1:15,1:16:11.84:12,0,208	0/1:13,3:16:7.08:7,0,229	0/1:16,2:18:2.70:3,0,314	0/1:24,1:25:35.82:36,0,280	0/1:13,0:13:2.68:3,0,159	1/1:14,10:25:26.74:258,27,0	0/1:16,1:17:24.04:24,0,27	0/1:9,0:9:8.22:8,0,29	0/1:35,0:34:99:152,0,108	0/0:18,0:17:0:0,0,0	0/0:12,0:11:24.08:0,24,352	0/1:21,0:21:5.74:6,0,302	0/0:35,3:37:0.10:0,0,389	0/0:19,0:19:24.05:0,24,287	0/1:26,0:26:34.39:94,0,34	0/1:23,0:22:6.04:80,0,6	1/1:8,0:8:2.60:43,3,0
chr10	53310378	.	CCAA	C	1436.20	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=6.790;DP=631;FS=3.972;HRun=0;HaplotypeScore=104.2792;InbreedingCoeff=0.8875;MQ=56.95;MQ0=29;MQRankSum=-0.063;QD=11.49;ReadPosRankSum=2.026;VQSLOD=3.4267;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:91.29:0,91,1662	0/0:7,0:7:21.07:0,21,424	0/0:47,0:19:54.17:0,54,1073	0/0:49,0:23:66.02:0,66,1330	1/1:1,23:24:27:344,27,0	1/1:3,14:17:21.07:323,21,0	1/1:4,11:14:11.95:133,12,0	0/0:34,0:32:84.25:0,84,1709	1/1:2,18:20:17.85:252,18,0	0/0:19,0:19:52.42:0,52,1083	0/0:28,0:27:66.01:0,66,1186	0/0:11,0:11:30.05:0,30,557	0/0:24,0:24:63.22:0,63,1335	1/1:3,20:23:21.07:324,21,0	0/0:17,0:17:49.41:0,49,997	0/1:12,0:12:16.40:16,0,410	0/0:26,0:24:57.14:0,57,1042	0/0:19,0:19:54.19:0,54,1128	0/0:16,0:16:36.12:0,36,730	0/0:26,0:26:75.26:0,75,1547	0/0:19,0:18:39.13:0,39,781	0/0:21,0:20:57.19:0,57,1169	0/0:22,0:22:66.23:0,66,1338	0/0:21,0:21:54.48:0,54,1138	1/1:0,14:14:15.05:232,15,0	0/0:29,0:27:78.26:0,78,1568	0/0:25,0:24:60.19:0,60,1169	0/0:10,0:10:24.08:0,24,509
chr10	53311205	.	GA	G	5687.66	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=16.172;DP=559;FS=1.093;HRun=5;HaplotypeScore=64.6168;InbreedingCoeff=0.9911;MQ=67.39;MQ0=0;MQRankSum=-3.543;QD=29.02;ReadPosRankSum=-0.037;VQSLOD=4.9959;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:11.64:0,12,541	0/0:10,0:10:30.09:0,30,394	0/0:15,0:15:38.97:0,39,449	0/0:11,0:11:30.09:0,30,392	1/1:3,35:38:99:1157,102,0	1/1:1,24:25:60.17:681,60,0	1/1:1,10:11:27.08:306,27,0	1/1:3,35:38:87.20:958,87,0	1/1:0,13:13:36.10:408,36,0	0/0:21,0:21:54.18:0,54,739	0/0:34,0:34:93.28:0,93,1227	0/0:20,0:20:54.18:0,54,739	0/0:15,0:15:45.14:0,45,598	1/1:2,11:13:33.09:374,33,0	0/0:18,0:18:54.18:0,54,739	0/0:20,0:20:57.19:0,57,780	1/1:1,17:18:45.13:510,45,0	1/1:0,14:14:42.12:476,42,0	0/0:23,0:23:63.19:0,63,843	0/0:32,0:32:93.29:0,93,1243	0/0:7,0:7:21.06:0,21,272	0/0:19,0:19:57.18:0,57,765	0/0:30,0:30:84.28:0,84,1136	0/0:6,0:6:15.05:0,15,205	1/1:0,26:26:72.21:816,72,0	0/0:23,0:23:66.21:0,66,889	0/0:34,0:34:99:0,102,1394	0/0:9,0:9:27.09:0,27,369
chr10	53312008	.	G	GA	4823.17	PASS	AB=0.956;AC=19;AF=0.339;AN=56;BaseQRankSum=-11.390;DP=556;FS=6.122;HRun=10;HaplotypeScore=58.0151;InbreedingCoeff=0.7390;MQ=63.83;MQ0=2;MQRankSum=1.883;QD=18.84;ReadPosRankSum=-0.017;VQSLOD=5.4872;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,1:24:18.68:0,19,350	0/0:6,0:6:17.98:0,18,148	0/0:13,0:11:7.18:0,7,105	0/1:11,0:11:9.75:10,0,84	0/0:30,1:32:50.92:0,51,610	0/0:20,0:20:50.93:0,51,418	0/0:8,0:8:17.98:0,18,148	0/0:28,0:28:71.74:0,72,581	0/0:19,0:19:47.91:0,48,390	1/1:4,23:27:66.09:674,66,0	1/1:8,26:34:34.88:770,35,0	0/0:13,1:14:0.96:0,1,214	0/0:16,0:17:37.98:0,38,301	0/0:16,0:16:44.92:0,45,366	0/0:18,0:18:47.91:0,48,389	0/0:7,0:7:17.97:0,18,148	0/1:14,1:15:10.17:10,0,172	0/0:20,0:21:28.63:0,29,327	1/1:3,15:18:45.09:471,45,0	1/1:6,28:35:68.45:887,68,0	1/1:4,15:19:42.11:448,42,0	0/0:22,1:23:24.92:0,25,411	0/1:25,2:27:6.02:6,0,467	0/0:8,0:8:20.97:0,21,172	0/0:25,1:26:36.91:0,37,510	1/1:3,18:21:29.47:510,29,0	1/1:7,27:35:75.02:781,75,0	1/1:1,10:11:24.06:256,24,0
chr10	53312285	.	CA	C	3680.27	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=13.396;DP=552;FS=1.866;HRun=2;HaplotypeScore=72.8119;InbreedingCoeff=0.9976;MQ=65.28;MQ0=0;MQRankSum=0.252;QD=34.40;ReadPosRankSum=2.067;VQSLOD=4.1749;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:27.09:0,27,403	0/0:6,0:6:18.05:0,18,252	0/0:13,0:13:33.11:0,33,494	0/0:18,0:17:48.15:0,48,681	1/1:2,22:24:72.18:871,72,0	1/1:1,14:15:39.12:476,39,0	1/1:1,11:12:33.10:410,33,0	0/0:38,0:38:99:0,102,1494	1/1:0,10:10:27.08:329,27,0	0/0:30,0:30:90.30:0,90,1349	0/0:30,0:30:84.28:0,84,1259	0/0:15,0:15:45.15:0,45,675	0/0:18,0:18:54.18:0,54,809	1/1:0,27:27:78.25:964,78,0	0/0:11,0:11:33.11:0,33,495	0/0:10,0:10:30.09:0,30,432	0/0:13,0:13:32.98:0,33,464	0/0:15,0:15:45.15:0,45,673	0/0:22,0:22:63.21:0,63,945	0/0:35,0:35:99:0,102,1491	0/0:15,0:15:45.15:0,45,675	0/0:25,0:25:75.24:0,75,1105	0/0:23,0:23:69.23:0,69,1027	0/0:18,0:18:54.18:0,54,809	1/1:2,17:19:51.16:630,51,0	0/0:26,0:26:78.26:0,78,1169	0/0:43,0:43:99:0,123,1824	0/0:12,0:12:36.12:0,36,539
chr10	53312377	.	C	CA	911.07	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-8.027;DP=492;FS=1.519;HRun=7;HaplotypeScore=52.8192;InbreedingCoeff=0.8901;MQ=63.47;MQ0=1;MQRankSum=0.294;QD=22.78;ReadPosRankSum=-3.718;VQSLOD=1.9272;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:33.04:0,33,314	0/0:11,0:11:33.05:0,33,319	1/1:7,0:7:2.80:13,3,0	0/0:11,0:9:18.03:0,18,173	0/0:29,1:30:41.88:0,42,688	0/0:24,0:24:63.10:0,63,608	0/0:10,0:10:24.03:0,24,228	1/1:4,28:32:84.25:1003,84,0	0/0:8,0:8:21.03:0,21,203	0/0:26,0:26:72.10:0,72,689	0/0:24,0:24:66.11:0,66,637	0/0:11,0:11:33.05:0,33,319	0/0:15,0:15:36.05:0,36,348	0/0:17,0:17:42.05:0,42,400	0/0:17,0:17:48.06:0,48,457	0/0:7,0:7:21.03:0,21,203	0/0:17,0:17:48.08:0,48,463	0/0:20,0:20:51.06:0,51,486	0/0:16,0:16:42.05:0,42,401	0/0:29,0:29:78.09:0,78,742	0/0:16,0:16:45.07:0,45,435	0/0:17,0:17:45.03:0,45,421	0/0:22,0:22:63.10:0,63,608	0/0:8,0:8:24.04:0,24,232	0/0:19,0:19:54.09:0,54,522	0/0:22,0:22:66.09:0,66,633	0/0:23,0:23:60.09:0,60,579	0/0:19,0:19:54.08:0,54,521
chr10	53312439	.	TA	T	1944.31	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=8.403;DP=463;FS=0.972;HRun=8;HaplotypeScore=45.6426;InbreedingCoeff=0.9890;MQ=61.39;MQ0=4;MQRankSum=0.271;QD=23.15;ReadPosRankSum=1.144;VQSLOD=4.0640;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:39.06:0,39,443	0/0:7,0:7:18.06:0,18,217	0/0:10,0:6:15.05:0,15,181	0/0:13,0:9:20.99:0,21,228	1/1:5,18:22:62.49:568,62,0	1/1:0,18:18:51.08:492,51,0	1/1:1,6:7:18.03:174,18,0	0/0:36,0:36:87.24:0,87,1029	1/1:0,6:6:18.03:173,18,0	0/0:20,0:20:60.18:0,60,716	0/0:20,0:20:51.15:0,51,606	0/0:13,0:13:36.10:0,36,423	0/0:13,0:13:33.10:0,33,398	1/1:2,16:18:39.06:377,39,0	0/0:13,0:13:39.12:0,39,471	0/0:6,0:6:18.06:0,18,217	0/0:17,0:17:45.09:0,45,516	0/0:23,0:24:54.85:0,55,748	0/0:14,0:14:39.12:0,39,471	0/0:22,0:22:60.18:0,60,721	0/0:12,0:11:33.08:0,33,376	0/0:14,0:14:42.11:0,42,487	0/0:22,0:22:66.17:0,66,767	0/0:11,0:11:27.04:0,27,326	1/1:0,12:12:36.06:348,36,0	0/0:27,0:27:72.21:0,72,860	0/0:29,0:29:81.24:0,81,969	0/0:18,0:18:54.12:0,54,624
chr10	53312952	.	CA	C	709.53	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=6.752;DP=580;FS=4.709;HRun=7;HaplotypeScore=54.8642;InbreedingCoeff=0.6400;MQ=64.47;MQ0=1;MQRankSum=-1.561;QD=16.89;ReadPosRankSum=-4.000;VQSLOD=2.6720;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:42.13:0,42,528	0/0:11,0:11:30.10:0,30,377	0/1:13,0:11:15.85:16,0,229	0/0:10,0:8:17.84:0,18,194	0/0:26,0:26:72.21:0,72,881	0/0:26,0:27:78.08:0,78,958	0/0:9,0:9:27.09:0,27,340	1/1:2,27:28:81.06:799,81,0	0/0:24,0:24:72.23:0,72,906	0/0:41,0:41:99:0,114,1424	0/0:21,0:21:57.18:0,57,717	0/0:17,0:17:51.16:0,51,642	0/0:23,0:23:69.22:0,69,868	0/0:22,0:22:66.20:0,66,817	0/0:18,0:18:54.16:0,54,666	0/0:21,0:21:60.19:0,60,755	0/0:8,0:8:15.05:0,15,189	0/0:10,0:10:24.08:0,24,302	0/0:12,0:12:33.11:0,33,415	0/0:30,0:30:90.29:0,90,1132	0/0:22,0:22:63.18:0,63,778	0/0:26,0:26:72.08:0,72,867	0/0:27,0:27:72.22:0,72,895	0/0:8,0:8:24.08:0,24,301	0/0:27,0:27:81.25:0,81,1008	0/0:38,0:38:99:0,108,1348	0/0:29,0:28:84.26:0,84,1044	0/0:15,0:15:39.12:0,39,491
chr10	53314136	.	T	TGGGG	9096.45	PASS	AB=0.787;AC=50;AF=0.962;AN=52;BaseQRankSum=4.173;DP=194;FS=0.000;HRun=2;HaplotypeScore=217.1676;InbreedingCoeff=-0.0684;MQ=84.04;MQ0=0;MQRankSum=-4.311;QD=46.89;ReadPosRankSum=4.260;VQSLOD=3.6163;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,0:2:6.02:99,6,0	1/1:9,0:9:27.09:425,27,0	0/1:3,3:8:42.27:180,0,42	0/1:8,2:11:44.81:156,0,45	1/1:13,0:13:36.12:594,36,0	1/1:11,0:11:33.11:599,33,0	1/1:4,0:4:12.04:223,12,0	./.	1/1:6,0:6:18.06:328,18,0	1/1:11,0:10:30.10:604,30,0	1/1:13,0:13:36.12:637,36,0	1/1:4,0:4:12.04:192,12,0	1/1:9,0:9:27.09:426,27,0	1/1:4,0:4:12.04:204,12,0	1/1:3,0:3:9.03:129,9,0	1/1:4,0:4:12.04:194,12,0	1/1:3,0:3:6.02:108,6,0	1/1:3,0:3:7.27:121,7,0	1/1:5,0:5:15.05:301,15,0	1/1:13,0:13:36.12:657,36,0	1/1:1,0:1:3.01:52,3,0	1/1:7,0:7:21.07:327,21,0	1/1:10,0:10:27.09:412,27,0	./.	1/1:16,0:16:48.16:855,48,0	1/1:6,0:6:18.06:355,18,0	1/1:12,0:12:33.11:570,33,0	1/1:6,0:6:18.06:349,18,0
chr10	53314142	.	A	AGGGG	12075.02	PASS	AB=0.800;AC=48;AF=0.923;AN=52;BaseQRankSum=6.012;DP=217;FS=2.358;HRun=0;HaplotypeScore=197.0980;InbreedingCoeff=0.3745;MQ=84.47;MQ0=0;MQRankSum=-6.111;QD=59.78;ReadPosRankSum=5.956;VQSLOD=5.8741;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,0:4:9.03:165,9,0	1/1:0,0:9:27.09:561,27,0	0/1:10,0:9:14.17:14,0,72	0/0:12,0:12:33.05:0,33,449	1/1:1,13:14:39.13:881,39,0	1/1:1,11:12:36.12:835,36,0	1/1:0,4:4:12.04:288,12,0	./.	1/1:0,6:6:18.06:422,18,0	1/1:2,11:12:33.11:860,33,0	1/1:0,13:13:39.13:900,39,0	1/1:0,0:4:12.04:251,12,0	1/1:0,0:9:27.09:548,27,0	1/1:3,4:7:15.05:344,15,0	1/1:2,0:5:9.03:174,9,0	1/1:0,0:4:12.04:252,12,0	1/1:1,2:3:6.02:137,6,0	0/1:1,2:3:3.80:151,0,4	1/1:0,5:5:15.05:404,15,0	1/1:1,13:14:36.12:875,36,0	1/1:0,1:1:3.01:68,3,0	1/1:0,0:7:21.07:438,21,0	1/1:3,0:13:30.08:558,30,0	./.	1/1:1,16:17:51.18:1221,51,0	1/1:1,6:7:18.06:471,18,0	1/1:1,11:12:33.11:786,33,0	1/1:0,6:6:18.06:471,18,0
chr10	53314280	.	A	AG	13631.68	PASS	AB=0.855;AC=54;AF=0.964;AN=56;BaseQRankSum=-1.213;DP=383;FS=4.377;HRun=0;HaplotypeScore=147.6299;InbreedingCoeff=-0.0415;MQ=62.67;MQ0=3;MQRankSum=-4.800;QD=35.59;ReadPosRankSum=3.283;VQSLOD=4.2611;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,18:18:51.02:751,51,0	1/1:1,9:10:27.09:430,27,0	0/1:11,4:11:55.14:212,0,55	0/1:21,2:16:93.14:93,0,207	1/1:0,22:22:44.88:565,45,0	1/1:0,12:12:30.10:478,30,0	1/1:0,14:14:33.11:522,33,0	1/1:0,15:15:45.11:680,45,0	1/1:0,8:8:18.06:286,18,0	1/1:0,14:14:42.14:670,42,0	1/1:0,11:11:23.73:350,24,0	1/1:0,11:11:33.11:525,33,0	1/1:0,10:10:30.10:477,30,0	1/1:0,9:9:27.09:429,27,0	1/1:0,6:6:18.06:287,18,0	1/1:0,14:14:39.13:621,39,0	1/1:1,10:11:27.09:430,27,0	1/1:0,3:3:9.03:143,9,0	1/1:0,10:9:24.08:383,24,0	1/1:0,28:28:72.09:1075,72,0	1/1:0,11:10:20.92:252,21,0	1/1:0,15:15:39.05:588,39,0	1/1:0,12:12:24.08:361,24,0	1/1:0,13:13:30.02:440,30,0	1/1:0,18:18:39:561,39,0	1/1:0,23:23:66.21:1029,66,0	1/1:0,22:22:51.17:801,51,0	1/1:0,4:4:12.04:192,12,0
chr10	53314285	.	C	CCAGAAAT	15054.17	PASS	AB=1.000;AC=53;AF=0.946;AN=56;BaseQRankSum=-2.735;DP=350;FS=12.933;HRun=0;HaplotypeScore=189.0651;InbreedingCoeff=0.7500;MQ=60.04;MQ0=3;MQRankSum=-5.633;QD=45.90;ReadPosRankSum=2.283;VQSLOD=4.0633;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:18:51.15:675,51,0	1/1:10,0:10:30.07:407,30,0	0/1:16,0:11:1.05:1,0,190	0/0:21,0:14:35.79:0,36,532	1/1:19,0:19:48.16:893,48,0	1/1:9,0:9:21.07:607,21,0	1/1:11,1:12:33.07:780,33,0	1/1:9,0:9:21.07:349,21,0	1/1:5,1:6:18.05:415,18,0	1/1:14,0:14:42.14:814,42,0	1/1:11,0:11:20.98:420,21,0	1/1:11,0:11:33.11:665,33,0	1/1:10,0:10:30.09:452,30,0	1/1:9,0:9:27.05:545,27,0	1/1:5,0:5:15.05:206,15,0	1/1:14,0:14:39.12:587,39,0	1/1:11,0:11:33.10:471,33,0	1/1:3,0:3:9.03:126,9,0	1/1:9,0:8:21.05:374,21,0	1/1:27,0:27:81.26:1317,81,0	1/1:9,0:8:21.06:324,21,0	1/1:16,0:16:45.10:725,45,0	1/1:10,0:10:26.90:377,27,0	1/1:13,0:13:32.88:441,33,0	1/1:13,2:15:45.15:1026,45,0	1/1:20,0:20:60.19:1032,60,0	1/1:18,0:18:54.05:806,54,0	1/1:4,0:4:9.03:219,9,0
chr10	53314286	.	C	CA	7774.93	PASS	AB=0.971;AC=54;AF=0.964;AN=56;BaseQRankSum=-0.408;DP=289;FS=3.448;HRun=0;HaplotypeScore=148.1930;InbreedingCoeff=-0.0469;MQ=62.79;MQ0=3;MQRankSum=-3.252;QD=26.90;ReadPosRankSum=2.361;VQSLOD=4.9023;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,18:18:51.15:593,51,0	1/1:1,6:7:21.03:222,21,0	0/1:14,0:10:28.85:58,0,29	0/1:20,0:14:26.69:27,0,136	1/1:1,13:14:38.84:378,39,0	1/1:1,6:7:18.05:204,18,0	1/1:2,8:10:26.95:261,27,0	1/1:1,4:5:15.04:170,15,0	1/1:2,2:4:12.02:126,12,0	1/1:1,9:10:29.96:339,30,0	1/1:1,7:8:20.99:219,21,0	1/1:0,6:6:18.05:206,18,0	1/1:1,8:9:27.07:300,27,0	1/1:0,9:9:27.08:309,27,0	1/1:0,4:4:12.04:138,12,0	1/1:1,12:13:36.09:403,36,0	1/1:0,10:10:30.09:345,30,0	1/1:0,3:3:9.03:104,9,0	1/1:1,4:5:12.03:145,12,0	1/1:0,22:22:65.94:702,66,0	1/1:1,7:7:17.36:167,17,0	1/1:3,10:13:36.21:339,36,0	1/1:1,8:9:23.89:237,24,0	1/1:1,10:12:30:319,30,0	1/1:2,10:12:35.97:374,36,0	1/1:1,14:15:45.13:526,45,0	1/1:3,13:16:48.03:506,48,0	1/1:1,1:2:6:58,6,0
chr10	53314835	.	C	CTAGAGA	5161.48	PASS	AB=0.958;AC=54;AF=0.964;AN=56;BaseQRankSum=4.285;DP=296;FS=7.162;HRun=0;HaplotypeScore=108.0984;InbreedingCoeff=-0.0622;MQ=81.95;MQ0=1;MQRankSum=-7.027;QD=17.44;ReadPosRankSum=4.889;VQSLOD=3.4734;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,0:10:11.86:134,12,0	1/1:1,0:2:6:76,6,0	0/1:9,1:11:99:192,0,234	0/1:18,0:20:27.16:27,0,607	1/1:8,0:9:9.03:152,9,0	1/1:4,0:7:14.19:164,14,0	1/1:3,0:9:17.87:108,18,0	1/1:0,0:12:33.94:419,34,0	1/1:14,0:18:11.72:123,12,0	1/1:5,0:8:21.01:215,21,0	1/1:7,0:13:28.56:276,29,0	1/1:2,0:8:20.49:188,20,0	1/1:3,0:15:38.12:253,38,0	1/1:8,0:15:27.88:260,28,0	1/1:11,0:19:26.79:186,27,0	1/1:9,0:12:26.63:328,27,0	1/1:7,0:9:14.86:184,15,0	1/1:5,0:6:6.02:92,6,0	1/1:2,0:3:0.75:40,1,0	1/1:5,0:10:20.56:187,21,0	1/1:6,0:13:26.08:301,26,0	1/1:2,0:10:23.57:203,24,0	1/1:1,0:8:20.20:144,20,0	1/1:10,0:13:10.72:83,11,0	1/1:1,0:7:20.64:216,21,0	1/1:6,0:8:17.96:188,18,0	1/1:4,0:13:29.63:250,30,0	1/1:0,0:7:20.93:174,21,0
chr10	53315096	.	GAAT	G	398.60	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=3.726;DP=549;FS=1.168;HRun=0;HaplotypeScore=89.4571;InbreedingCoeff=0.9022;MQ=60.37;MQ0=1;MQRankSum=-0.927;QD=24.91;ReadPosRankSum=2.041;VQSLOD=3.8254;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:63.21:0,63,1415	0/0:9,0:9:24.08:0,24,553	0/0:18,0:14:36.10:0,36,706	0/0:15,0:12:6.58:0,7,502	0/0:29,0:29:72.25:0,72,1604	0/0:30,0:30:90.31:0,90,2053	0/0:14,0:14:39.13:0,39,845	0/0:30,0:29:87.30:0,87,1971	0/0:23,0:23:69.22:0,69,1506	0/0:23,0:23:63.22:0,63,1453	0/0:25,0:25:75.26:0,75,1660	0/0:15,0:15:42.14:0,42,969	0/0:25,0:25:72.25:0,72,1598	0/0:25,0:25:72.25:0,72,1660	0/0:12,0:12:33.11:0,33,726	0/0:5,0:5:12.04:0,12,277	1/1:0,12:12:21.07:358,21,0	1/1:0,4:4:9.03:153,9,0	0/0:16,0:16:48.16:0,48,1027	0/0:31,0:31:90.31:0,90,2004	0/0:14,0:14:36.12:0,36,791	0/0:9,0:9:21.07:0,21,483	0/0:25,0:25:72.25:0,72,1651	0/0:11,0:11:24.08:0,24,496	0/0:20,0:20:60.21:0,60,1319	0/0:30,0:30:87.30:0,87,1984	0/0:30,0:30:90.30:0,90,2005	0/0:28,0:28:78.27:0,78,1777
chr10	53315862	.	GA	G	2597.19	PASS	AB=0.800;AC=13;AF=0.232;AN=56;BaseQRankSum=4.625;DP=458;FS=6.566;HRun=10;HaplotypeScore=56.7620;InbreedingCoeff=0.8359;MQ=72.63;MQ0=1;MQRankSum=-0.963;QD=18.96;ReadPosRankSum=2.145;VQSLOD=4.6324;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:48.09:0,48,517	0/1:3,1:4:14.02:14,0,88	0/0:15,0:14:1.19:0,1,85	0/0:10,0:9:11.93:0,12,103	1/1:2,29:31:56.80:721,57,0	1/1:2,22:24:62.97:547,63,0	1/1:1,9:10:18:156,18,0	0/0:34,0:34:64.14:0,64,388	1/1:2,14:16:38.99:339,39,0	0/0:15,0:16:32.91:0,33,336	0/0:19,0:20:59.94:0,60,635	0/0:7,0:7:21.05:0,21,224	0/0:13,0:13:33.08:0,33,357	1/1:0,12:12:32.99:286,33,0	0/0:9,0:9:21.04:0,21,223	0/0:15,0:15:42.11:0,42,462	0/0:2,0:6:8.52:0,9,43	0/0:2,0:11:25.73:0,26,147	0/0:21,0:21:48.21:0,48,529	0/0:18,1:19:13.02:0,13,351	0/0:5,0:5:15.04:0,15,165	0/0:12,0:12:27.05:0,27,283	0/0:25,0:25:57.15:0,57,623	0/0:13,0:13:35.97:0,36,353	1/1:4,36:40:56.78:722,57,0	0/0:10,0:10:27.05:0,27,288	0/0:22,1:23:40.10:0,40,653	0/0:18,0:18:51.08:0,51,534
chr10	53324078	.	TA	T	1811.41	PASS	AC=16;AF=0.400;AN=40;BaseQRankSum=4.742;DP=218;FS=38.271;HRun=10;HaplotypeScore=46.7717;InbreedingCoeff=0.9018;MQ=72.39;MQ0=18;MQRankSum=-1.764;QD=20.82;ReadPosRankSum=-0.344;VQSLOD=1.6378;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:15:24.93:0,25,295	0/0:5,0:5:12.03:0,12,133	0/0:18,0:13:32.41:0,32,302	0/0:19,0:7:5.48:0,5,58	./.	./.	./.	./.	./.	1/1:1,8:9:23.99:208,24,0	1/1:1,11:12:32.71:286,33,0	0/0:9,0:9:27.06:0,27,290	0/0:4,0:4:12.03:0,12,133	./.	0/0:8,1:9:1.02:0,1,239	0/0:3,0:3:9.02:0,9,100	0/0:14,0:9:21.06:0,21,232	0/0:10,0:10:24.94:0,25,258	1/1:2,9:11:26.99:234,27,0	1/1:1,15:16:41.91:356,42,0	1/1:0,5:5:14.90:121,15,0	0/0:9,0:9:24.06:0,24,266	0/0:10,0:9:27.03:0,27,285	./.	./.	1/1:2,9:11:26.99:234,27,0	1/1:0,14:14:38.99:338,39,0	1/1:1,8:9:24:208,24,0
chr10	53324106	.	C	CAA	1451.67	PASS	AB=0.875;AC=16;AF=0.381;AN=42;BaseQRankSum=2.854;DP=272;FS=22.419;HRun=14;HaplotypeScore=67.6070;InbreedingCoeff=0.5866;MQ=76.96;MQ0=7;MQRankSum=-1.874;QD=10.44;ReadPosRankSum=-1.404;VQSLOD=0.2825;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:19:26.45:0,26,204	0/0:0,0:5:4.95:0,5,39	0/1:40,0:15:11.64:12,0,37	0/0:37,0:14:2.86:0,3,64	./.	./.	./.	./.	./.	0/1:6,1:8:13.70:76,0,14	1/1:10,3:16:24.05:277,24,0	0/0:8,0:9:1.95:0,2,48	0/0:6,0:8:4.59:0,5,22	./.	0/0:7,0:7:11.87:0,12,100	0/0:6,0:6:8.84:0,9,75	0/0:9,0:9:4.62:0,5,30	0/0:8,0:9:8.78:0,9,105	1/1:11,0:12:17.35:137,17,0	1/1:14,3:18:28.24:269,28,0	1/1:5,1:6:6.88:65,7,0	0/0:9,0:10:17.86:0,18,147	0/0:7,0:9:13.11:0,13,91	0/0:3,0:3:5.80:0,6,39	./.	1/1:8,1:12:10.18:148,10,0	1/1:11,7:18:38.56:432,39,0	1/1:5,2:7:20.98:198,21,0
chr10	53327458	.	A	AG	231.36	PASS	AC=8;AF=0.308;AN=26;BaseQRankSum=-0.688;DP=493;FS=0.000;HRun=3;HaplotypeScore=5.3486;InbreedingCoeff=0.4384;MQ=8.96;MQ0=383;MQRankSum=-0.109;QD=3.26;ReadPosRankSum=0.181;VQSLOD=-0.4968;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	0/0:22,0:3:6.02:0,6,72	0/0:19,0:2:3.01:0,3,36	0/0:22,0:1:3.01:0,3,36	./.	0/0:15,0:2:6.02:0,6,72	1/1:8,8:2:3.01:42,3,0	./.	0/0:18,0:3:6.02:0,6,72	0/0:23,0:2:3.01:0,3,36	./.	./.	./.	./.	./.	./.	1/1:6,7:4:6.02:84,6,0	./.	0/0:14,0:3:6.02:0,6,72	0/0:17,0:4:3.01:0,3,36	./.	0/0:25,0:3:3.01:0,3,36	1/1:10,7:2:3.01:42,3,0	1/1:10,15:8:12.04:167,12,0	./.
chr10	53328162	.	CG	C	194.59	PASS	AC=2;AF=0.038;AN=52;BaseQRankSum=-0.136;DP=464;FS=5.019;HRun=4;HaplotypeScore=49.0520;InbreedingCoeff=0.8882;MQ=47.31;MQ0=50;MQRankSum=-1.672;QD=16.22;ReadPosRankSum=-2.842;VQSLOD=2.2619;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:35:78.26:0,78,1086	0/0:7,0:7:12.04:0,12,168	0/0:10,0:5:8.40:0,8,161	0/0:12,0:9:24.01:0,24,303	0/0:21,0:18:42.14:0,42,580	0/0:14,0:11:24.08:0,24,335	0/0:22,0:19:42.14:0,42,583	1/1:3,9:8:24.07:287,24,0	0/0:18,0:16:42.14:0,42,585	0/0:16,0:16:45.15:0,45,628	0/0:23,0:21:27.09:0,27,377	0/0:20,0:18:24.08:0,24,332	0/0:22,0:17:42.11:0,42,585	0/0:20,0:20:51.17:0,51,711	0/0:19,0:15:30.10:0,30,418	0/0:13,0:12:30.06:0,30,396	./.	./.	0/0:19,0:11:33.11:0,33,460	0/0:16,0:15:39.13:0,39,541	0/0:18,0:15:36.10:0,36,483	0/0:9,0:8:18.06:0,18,251	0/0:20,0:16:42.14:0,42,585	0/0:20,0:19:42.14:0,42,587	0/0:10,0:8:18.06:0,18,251	0/0:25,0:22:60.20:0,60,836	0/0:25,0:23:63.21:0,63,874	0/0:13,0:11:27.09:0,27,376
chr10	53330156	.	GT	G	11559.57	PASS	AB=1.000;AC=54;AF=0.964;AN=56;BaseQRankSum=0.675;DP=581;FS=0.000;HRun=1;HaplotypeScore=253.6634;InbreedingCoeff=-0.0231;MQ=67.27;MQ0=0;MQRankSum=-3.082;QD=19.90;ReadPosRankSum=3.451;VQSLOD=4.5402;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:37,0:37:86.96:514,87,0	1/1:18,0:18:37.68:223,38,0	0/1:10,0:10:2.37:48,0,2	0/1:18,0:18:0.08:166,0,0	1/1:3,24:27:72.23:985,72,0	1/1:3,18:21:60.20:830,60,0	1/1:5,14:19:48.15:652,48,0	1/1:0,20:20:60.19:820,60,0	1/1:0,20:20:48.16:667,48,0	1/1:28,0:28:51.50:437,52,0	1/1:25,1:26:67.05:434,67,0	1/1:10,0:10:26.35:169,26,0	1/1:15,0:15:29.89:172,30,0	1/1:2,15:17:45.15:625,45,0	1/1:15,0:15:38.02:236,38,0	1/1:22,0:22:60.97:365,61,0	1/1:0,16:16:33.10:446,33,0	1/1:0,7:7:9.03:125,9,0	1/1:16,0:16:42.16:221,42,0	1/1:31,0:31:72.95:433,73,0	1/1:28,0:28:61.32:385,61,0	1/1:25,0:25:64.45:408,64,0	1/1:37,0:37:90.87:576,91,0	1/1:18,0:18:20.45:181,20,0	1/1:2,15:17:45.15:633,45,0	1/1:25,0:25:56.38:311,56,0	1/1:22,0:22:49.80:311,50,0	1/1:16,0:16:32.04:188,32,0
chr10	53331091	.	TCA	T	3794.34	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=6.969;DP=690;FS=2.341;HRun=0;HaplotypeScore=100.3093;InbreedingCoeff=0.8904;MQ=64.63;MQ0=6;MQRankSum=1.089;QD=22.32;ReadPosRankSum=1.817;VQSLOD=4.3524;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:69.24:0,69,1138	0/0:10,0:10:18.06:0,18,299	0/1:33,0:16:8.67:9,0,259	0/0:42,0:25:47.92:0,48,545	1/1:3,22:25:66.10:832,66,0	1/1:10,9:19:45.12:546,45,0	1/1:10,14:24:48.14:592,48,0	0/0:30,0:29:66.22:0,66,1047	1/1:8,12:20:39.12:491,39,0	0/0:24,0:24:60.04:0,60,894	0/0:13,0:13:39.07:0,39,571	0/0:15,0:15:27.08:0,27,448	0/0:17,0:17:42.14:0,42,693	1/1:15,12:27:63.15:762,63,0	0/0:11,0:11:30.10:0,30,499	0/0:24,0:24:54.64:0,55,861	0/0:32,0:32:81.28:0,81,1328	0/0:24,0:23:66.20:0,66,1061	0/0:31,0:30:58.37:0,58,900	0/0:21,0:21:51.16:0,51,815	0/0:57,1:52:50.82:0,51,1407	0/0:26,0:26:63.17:0,63,957	0/0:23,0:23:57.19:0,57,927	0/0:29,0:29:72.25:0,72,1178	1/1:11,10:21:48.10:563,48,0	0/0:42,0:42:99:0,105,1620	0/0:16,0:15:30.09:0,30,471	0/0:3,0:3:6.02:0,6,100
chr10	53331147	.	C	CCA	2535.54	PASS	AB=0.916;AC=17;AF=0.304;AN=56;BaseQRankSum=6.164;DP=995;FS=0.973;HRun=0;HaplotypeScore=152.4192;InbreedingCoeff=0.5045;MQ=43.20;MQ0=86;MQRankSum=-6.179;QD=8.87;ReadPosRankSum=-3.899;VQSLOD=2.9680;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:33:81.24:0,81,1005	0/0:17,0:13:24.04:0,24,286	0/0:123,0:14:26.88:0,27,284	0/0:123,0:13:16.43:0,16,200	1/1:14,7:16:12.04:181,12,0	1/1:13,8:22:33.11:507,33,0	1/1:18,6:20:32.81:449,33,0	1/1:37,4:35:27.47:347,27,0	0/1:10,7:18:7.91:340,0,8	0/1:48,0:40:59.29:59,0,445	0/1:20,0:14:7.19:7,0,100	0/0:19,0:16:33.10:0,33,416	0/0:18,0:16:45.06:0,45,508	1/1:23,2:21:1.15:437,1,0	0/0:19,0:16:29.63:0,30,378	0/0:15,0:15:31.60:0,32,350	0/0:36,0:34:29.77:0,30,698	0/0:21,0:20:6.50:0,6,337	0/0:52,0:39:7.79:0,8,479	0/1:22,0:18:19.75:20,0,303	0/0:64,0:53:49.27:0,49,633	0/0:29,0:26:36.10:0,36,435	0/0:18,0:17:36.11:0,36,452	0/0:41,0:40:99:0,99,1224	1/1:10,7:17:23.90:337,24,0	0/0:52,0:41:2.64:0,3,599	0/0:20,0:15:28.86:0,29,350	0/1:13,0:11:35.76:36,0,226
chr10	53331174	.	AAC	A	1220.37	PASS	AB=0.970;AC=13;AF=0.232;AN=56;BaseQRankSum=1.455;DP=812;FS=4.203;HRun=0;HaplotypeScore=153.3847;InbreedingCoeff=-0.1060;MQ=40.50;MQ0=61;MQRankSum=-0.465;QD=3.46;ReadPosRankSum=2.714;VQSLOD=2.7960;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:62.64:0,63,1079	0/0:17,0:16:39.13:0,39,568	0/0:53,0:7:2.68:0,3,11	0/0:60,0:4:2.59:0,3,11	0/0:15,0:11:18.49:0,18,121	0/0:24,0:23:44:0,44,346	0/0:25,0:18:10.43:0,10,133	0/1:61,0:54:2.38:2,0,850	0/0:21,0:20:33.89:0,34,320	0/1:29,3:27:99:182,0,209	0/1:15,0:12:31.47:40,0,31	0/0:27,0:25:33.09:0,33,516	0/0:16,0:16:22.16:0,22,510	0/0:24,0:16:32.45:0,32,276	0/0:18,0:17:29.89:0,30,420	0/1:13,2:13:10.26:10,0,330	0/1:29,0:29:99:244,0,180	0/1:16,0:14:99:126,0,145	0/1:25,1:19:96.59:111,0,97	0/1:17,0:17:30.06:30,0,119	0/1:58,0:44:84.14:84,0,95	0/0:26,0:25:43.11:0,43,611	0/0:19,0:17:32.90:0,33,455	0/0:53,1:53:73.07:0,73,1532	0/0:21,0:18:21.72:0,22,268	0/1:36,2:33:99:293,0,211	0/1:21,0:17:51.92:52,0,100	1/1:14,0:12:19.47:200,19,0
chr10	53331188	.	CA	C	2957.83	PASS	AB=0.756;AC=18;AF=0.321;AN=56;BaseQRankSum=1.040;DP=783;FS=14.332;HRun=2;HaplotypeScore=142.7128;InbreedingCoeff=-0.2822;MQ=42.09;MQ0=63;MQRankSum=-0.456;QD=6.12;ReadPosRankSum=3.313;VQSLOD=-0.5093;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,2:41:65.58:0,66,1353	0/0:17,0:17:45.11:0,45,613	0/0:39,0:8:15.93:0,16,183	0/0:45,1:7:12.03:0,12,130	0/1:5,10:13:38.74:206,0,39	0/1:10,15:23:99:267,0,152	0/1:14,15:23:61.70:371,0,62	0/1:49,18:58:99:454,0,775	0/1:12,7:17:99:153,0,168	0/1:33,2:28:99:99,0,227	0/1:13,5:16:25.28:125,0,25	0/0:22,0:21:47.99:0,48,615	0/0:13,1:14:36.58:0,37,493	0/1:11,17:21:99:229,0,136	0/0:13,0:12:25.55:0,26,336	0/0:14,0:12:28.91:0,29,392	0/1:29,6:29:12.81:222,0,13	1/1:18,1:17:6.87:48,7,0	0/1:22,6:17:82.36:82,0,194	0/1:14,1:13:38.74:39,0,54	0/1:38,9:31:99:142,0,168	0/0:31,0:30:61.33:0,61,798	0/0:14,0:13:30.88:0,31,359	0/0:48,1:48:75.43:0,75,1492	0/1:11,13:19:99:113,0,158	0/1:34,10:38:99:367,0,328	0/1:10,7:12:65.64:135,0,66	0/1:11,7:14:2.03:69,0,2
chr10	53331189	.	A	AC	2723.10	PASS	AB=0.943;AC=19;AF=0.339;AN=56;BaseQRankSum=1.392;DP=775;FS=17.388;HRun=1;HaplotypeScore=146.0159;InbreedingCoeff=-0.1913;MQ=42.60;MQ0=61;MQRankSum=1.597;QD=5.64;ReadPosRankSum=3.322;VQSLOD=-0.7286;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:65.78:0,66,1321	0/0:17,0:17:45.11:0,45,583	0/0:34,0:8:15.51:0,16,183	0/0:43,0:8:12.02:0,12,131	0/1:17,0:15:41.30:79,0,41	0/1:25,1:24:58.49:58,0,158	0/1:29,1:24:63.49:331,0,63	0/1:63,2:58:99:406,0,766	0/1:18,1:17:93.17:93,0,145	0/1:31,3:27:65.60:66,0,223	0/1:18,0:16:18.63:88,0,19	0/0:19,0:21:49.88:0,50,608	0/0:13,0:14:37.33:0,37,478	0/1:25,3:21:99:192,0,136	0/0:11,0:12:26.30:0,26,334	0/0:14,0:12:30.04:0,30,388	0/1:19,16:29:2.09:578,0,2	1/1:5,14:17:14.80:362,15,0	0/1:26,1:16:82.06:82,0,194	0/1:14,1:13:26.42:26,0,55	0/1:47,1:33:99:121,0,153	0/0:25,0:30:62.79:0,63,789	0/0:13,0:12:30.88:0,31,345	0/0:44,0:49:95.10:0,95,1472	0/1:24,0:19:17.31:17,0,161	0/1:42,1:38:99:326,0,291	0/1:15,1:11:26.75:27,0,66	1/1:17,1:14:3.67:37,4,0
chr10	53334256	.	GA	G	1037.16	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.787;DP=540;FS=7.319;HRun=8;HaplotypeScore=53.0311;InbreedingCoeff=0.9959;MQ=75.36;MQ0=0;MQRankSum=-1.207;QD=23.05;ReadPosRankSum=0.460;VQSLOD=3.9369;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,99,1196	0/0:9,0:9:24.06:0,24,279	0/0:17,0:14:30.05:0,30,316	0/0:19,0:18:23.18:0,23,258	0/0:24,0:24:63.17:0,63,747	0/0:17,0:17:45.14:0,45,544	0/0:17,0:17:45.14:0,45,544	0/0:27,0:27:66.18:0,66,777	0/0:20,0:20:57.16:0,57,676	0/0:33,0:33:93.27:0,93,1106	0/0:23,0:23:66.19:0,66,786	0/0:16,0:16:45.14:0,45,543	0/0:13,0:13:33.10:0,33,398	0/0:16,0:16:39.12:0,39,471	0/0:8,0:8:24.07:0,24,290	0/0:13,0:13:36.11:0,36,435	1/1:2,25:27:69.11:666,69,0	1/1:1,17:18:51.08:492,51,0	0/0:17,0:17:45.11:0,45,528	0/0:27,0:27:72.22:0,72,870	0/0:22,0:22:60.11:0,60,682	0/0:13,0:13:36.10:0,36,423	0/0:25,0:25:60.18:0,60,725	0/0:18,0:18:42.13:0,42,507	0/0:15,0:15:42.10:0,42,483	0/0:15,0:15:39.12:0,39,471	0/0:22,0:22:60.18:0,60,723	0/0:13,0:13:39.12:0,39,471
chr10	53334495	.	AT	A	1771.13	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=10.348;DP=628;FS=1.064;HRun=4;HaplotypeScore=84.5199;InbreedingCoeff=0.9984;MQ=89.67;MQ0=0;MQRankSum=-1.956;QD=29.03;ReadPosRankSum=-2.524;VQSLOD=2.4905;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,144,1889	0/0:11,0:11:33.11:0,33,461	0/0:32,0:32:83.30:0,83,1000	0/0:26,0:26:71.91:0,72,870	0/0:30,0:30:87.27:0,87,1187	0/0:21,0:21:63.20:0,63,866	0/0:27,0:27:81.27:0,81,1133	1/1:2,26:28:78.20:901,78,0	0/0:35,0:35:99:0,99,1353	0/0:32,0:32:90.28:0,90,1204	0/0:8,0:8:24.07:0,24,321	0/0:8,0:8:24.07:0,24,318	0/0:18,0:18:54.17:0,54,741	0/0:24,0:24:71.58:0,72,940	0/0:22,0:22:66.20:0,66,889	0/0:25,0:24:75.24:0,75,1034	1/1:6,12:18:51.04:559,51,0	1/1:3,12:15:39.10:454,39,0	0/0:16,0:16:42.10:0,42,538	0/0:22,0:22:66.18:0,66,869	0/0:28,0:28:75.25:0,75,1049	0/0:15,0:15:45.13:0,45,599	0/0:15,0:15:45.15:0,45,621	0/0:19,0:19:54.18:0,54,756	0/0:28,0:29:84.28:0,84,1173	0/0:22,0:22:63.19:0,63,849	0/0:19,0:19:54.17:0,54,735	0/0:13,0:13:39.13:0,39,546
chr10	53334537	.	GA	G	611.98	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.303;DP=635;FS=9.626;HRun=7;HaplotypeScore=73.2639;InbreedingCoeff=0.9083;MQ=78.51;MQ0=0;MQRankSum=-2.408;QD=19.74;ReadPosRankSum=0.518;VQSLOD=2.5044;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:57:99:0,165,1984	0/0:10,0:10:27.08:0,27,329	0/0:13,1:15:2.40:0,2,318	0/0:20,0:20:41.26:0,41,421	0/0:30,0:30:84.23:0,84,1028	0/0:32,0:32:87.27:0,87,1083	0/0:24,0:24:72.20:0,72,871	0/0:31,0:31:78.24:0,78,960	0/0:29,1:30:50.66:0,51,922	0/0:25,0:25:66.21:0,66,830	0/0:19,0:18:54.16:0,54,667	0/0:13,0:13:33.09:0,33,401	0/0:18,0:18:51.16:0,51,641	0/0:21,0:21:60.19:0,60,753	0/0:26,0:26:75.23:0,75,930	0/0:23,0:22:60.18:0,60,742	1/1:5,13:18:39.08:397,39,0	1/1:1,12:13:33.07:336,33,0	0/0:14,0:14:39.12:0,39,480	0/0:30,0:30:78.25:0,78,981	0/0:17,0:17:45.13:0,45,554	0/0:24,0:24:66.19:0,66,805	0/0:16,0:16:42.13:0,42,528	0/0:25,0:25:72.19:0,72,867	0/0:27,0:27:60.17:0,60,740	0/0:23,0:23:60.19:0,60,755	0/0:24,0:24:63.20:0,63,793	0/0:10,0:10:30.10:0,30,377
chr10	53335208	.	T	TTCCTTCCA	816.85	PASS	AB=0.772;AC=4;AF=0.071;AN=56;BaseQRankSum=3.301;DP=587;FS=3.355;HRun=0;HaplotypeScore=143.7668;InbreedingCoeff=0.3814;MQ=66.36;MQ0=4;MQRankSum=-4.499;QD=9.61;ReadPosRankSum=-0.456;VQSLOD=2.4790;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,112,2372	0/0:8,0:8:21.06:0,21,487	0/0:28,0:23:45.10:0,45,889	0/0:19,0:16:24.30:0,24,446	0/0:20,0:20:54.12:0,54,1162	0/0:23,0:23:60.03:0,60,1183	0/0:25,0:25:57.10:0,57,1106	0/1:31,0:30:95.02:95,0,285	0/0:16,0:16:36.01:0,36,684	0/0:22,0:22:60.20:0,60,1472	0/0:15,0:15:33.06:0,33,583	0/0:15,0:15:42.04:0,42,819	0/0:18,0:18:48.15:0,48,1111	0/0:18,0:18:51.11:0,51,1036	0/0:26,0:26:78.23:0,78,1803	0/0:21,0:21:54.18:0,54,1266	0/1:5,17:31:17.25:665,0,17	1/1:6,10:23:5.79:163,6,0	0/0:20,0:18:45.05:0,45,794	0/0:19,0:19:39.13:0,39,947	0/0:14,0:14:35.87:0,36,668	0/0:18,0:18:46.67:0,47,1128	0/0:13,0:13:30.07:0,30,700	0/0:24,0:24:45.29:0,45,1260	0/0:17,0:17:45.12:0,45,1029	0/0:17,0:17:48.10:0,48,1072	0/0:22,0:22:66.17:0,66,1479	0/0:20,0:20:57.11:0,57,1317
chr10	53335789	.	C	CTG	1495.16	PASS	AB=0.987;AC=31;AF=0.646;AN=48;BaseQRankSum=4.840;DP=864;FS=0.809;HRun=0;HaplotypeScore=147.0013;InbreedingCoeff=0.5680;MQ=59.81;MQ0=82;MQRankSum=-2.258;QD=3.26;ReadPosRankSum=-1.101;VQSLOD=2.0585;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,9:37:2.45:0,2,22	./.	./.	./.	0/1:19,0:19:0:0,0,0	1/1:26,0:24:11.02:82,11,0	1/1:32,0:30:6:62,6,0	1/1:36,0:35:0.89:2,1,0	1/1:30,0:29:11.84:95,12,0	1/1:38,0:38:29.06:232,29,0	1/1:13,0:13:6:64,6,0	0/0:22,0:23:8.85:0,9,78	0/0:15,0:19:11.68:0,12,83	1/1:31,0:30:6:55,6,0	0/0:17,1:18:14.80:0,15,115	0/0:22,0:23:14.87:0,15,141	0/1:24,1:24:13.93:167,0,14	0/1:33,0:32:27.85:320,0,28	1/1:19,0:19:17.96:157,18,0	1/1:18,0:18:5.99:50,6,0	1/1:57,0:56:11.47:114,11,0	0/0:25,0:23:20.71:0,21,188	./.	0/0:24,0:24:18.02:0,18,181	1/1:21,0:21:2.99:24,3,0	1/1:27,0:24:8.94:65,9,0	1/1:21,0:21:15.44:123,15,0	1/1:12,0:12:5.99:50,6,0
chr10	53335795	.	G	GTGTGTGTA	4848.10	PASS	AB=0.848;AC=18;AF=0.321;AN=56;BaseQRankSum=-4.105;DP=906;FS=5.651;HRun=0;HaplotypeScore=197.0338;InbreedingCoeff=0.4941;MQ=54.29;MQ0=85;MQRankSum=-2.458;QD=14.30;ReadPosRankSum=2.118;VQSLOD=3.3864;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:41:4.63:0,5,349	0/0:7,0:7:14.96:0,15,120	0/0:97,0:14:23.74:0,24,202	0/0:114,0:20:35.76:0,36,299	0/0:21,0:21:16.87:0,17,97	0/1:27,0:25:82.51:83,0,129	0/1:33,0:31:9.94:164,0,10	0/0:34,0:33:56.24:0,56,293	0/1:27,0:27:99:103,0,218	1/1:37,0:36:78.05:1274,78,0	1/1:4,8:16:5.86:121,6,0	0/0:28,0:28:53.88:0,54,584	0/0:24,0:24:44.96:0,45,518	0/1:31,0:30:15.79:140,0,16	0/0:21,0:20:56.94:0,57,627	0/0:28,0:27:44.57:0,45,615	0/0:27,0:26:23.90:0,24,254	0/0:33,0:32:37.58:0,38,433	1/1:23,0:23:32.90:725,33,0	0/1:3,11:17:0.15:230,0,0	1/1:59,0:58:61.30:738,61,0	0/0:29,0:27:68.16:0,68,887	0/0:12,0:12:17.95:0,18,143	0/0:30,0:29:59.73:0,60,764	0/0:20,0:20:11.06:0,11,97	1/1:9,17:27:1.90:529,2,0	1/1:2,18:26:15.39:493,15,0	0/1:3,3:12:7.56:249,0,8
chr10	53335799	.	G	GTA	2359.03	PASS	AB=0.816;AC=17;AF=0.304;AN=56;BaseQRankSum=-2.823;DP=912;FS=2.991;HRun=0;HaplotypeScore=121.5070;InbreedingCoeff=0.1593;MQ=51.90;MQ0=91;MQRankSum=0.412;QD=7.06;ReadPosRankSum=3.849;VQSLOD=3.5023;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:42:50.84:0,51,421	0/0:7,0:7:14.95:0,15,119	0/0:99,0:13:32.54:0,33,245	0/0:114,0:18:24.39:0,24,242	0/1:22,0:22:19.06:112,0,19	1/1:28,0:26:0.04:365,0,0	0/1:13,20:31:56.07:91,0,56	1/1:35,0:34:43.49:508,43,0	0/1:32,0:31:37.81:330,0,38	0/0:35,0:34:22.77:0,23,503	1/1:15,0:15:5.93:45,6,0	0/0:25,0:25:53.86:0,54,472	0/0:24,0:24:56.59:0,57,486	0/1:11,18:28:18.97:46,0,19	0/0:26,0:24:62.91:0,63,567	0/0:27,0:26:53.98:0,54,527	0/1:7,20:26:48.21:239,0,48	0/1:8,25:35:25.19:523,0,25	0/0:21,0:21:18.82:0,19,241	0/1:17,0:17:8.79:13,0,9	0/0:59,0:58:60.98:0,61,668	0/0:29,0:27:71.91:0,72,685	0/0:11,0:11:17.96:0,18,145	0/0:30,0:29:62.94:0,63,628	1/1:22,0:22:1.95:189,2,0	0/0:28,0:25:26.05:0,26,229	0/1:25,0:26:6.94:56,0,7	0/1:12,0:11:6.62:7,0,50
chr10	53337449	.	AC	A	710.53	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.820;DP=614;FS=17.298;HRun=6;HaplotypeScore=71.8176;InbreedingCoeff=0.9918;MQ=95.22;MQ0=0;MQRankSum=-3.761;QD=24.50;ReadPosRankSum=-2.280;VQSLOD=1.6332;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:84.24:0,84,1070	0/0:7,0:7:21.07:0,21,276	0/0:30,0:30:81.25:0,81,1025	0/0:29,0:29:72.20:0,72,925	0/0:20,0:20:60.19:0,60,784	0/0:24,0:24:60.20:0,60,788	0/0:28,0:28:75.20:0,75,943	1/1:3,26:29:75.19:805,75,0	0/0:21,0:21:63.19:0,63,809	0/0:20,0:20:60.18:0,60,766	0/0:24,0:24:66.21:0,66,854	0/0:17,0:17:45.13:0,45,578	0/0:20,0:20:57.17:0,57,733	0/0:19,0:19:54.18:0,54,708	0/0:22,0:22:66.21:0,66,867	0/0:26,0:26:75.24:0,75,974	0/0:17,0:17:42.14:0,42,553	0/0:8,0:8:21.07:0,21,276	0/0:23,0:23:60.18:0,60,772	0/0:30,0:30:81.25:0,81,1052	0/0:21,0:21:60.14:0,60,731	0/0:28,0:28:75.24:0,75,984	0/0:22,0:22:66.16:0,66,810	0/0:13,0:13:36.12:0,36,474	0/0:19,0:19:54.18:0,54,711	0/0:18,0:18:51.17:0,51,671	0/0:31,0:31:90.27:0,90,1155	0/0:16,0:16:39.11:0,39,498
chr10	53338983	.	G	GC	12042.39	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=11.841;DP=459;FS=10.409;HRun=0;HaplotypeScore=74.8245;InbreedingCoeff=0.9511;MQ=57.02;MQ0=1;MQRankSum=-5.253;QD=44.93;ReadPosRankSum=2.926;VQSLOD=4.5917;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,123,1682	0/0:7,0:7:21.07:0,21,294	0/0:17,0:13:29.71:0,30,409	0/0:19,0:14:42.13:0,42,563	1/1:0,12:12:33.11:527,33,0	1/1:0,20:21:63.11:974,63,0	1/1:0,21:21:63.21:1005,63,0	1/1:1,22:23:66.23:1055,66,0	1/1:0,15:15:42.14:671,42,0	1/1:0,12:12:36.12:571,36,0	1/1:0,3:3:9.03:143,9,0	0/0:12,0:12:36.12:0,36,498	0/0:8,0:8:24.08:0,24,335	1/1:0,16:16:45.15:718,45,0	0/0:23,0:23:69.23:0,69,964	0/0:16,1:17:0.19:0,0,580	1/1:1,22:23:60.20:959,60,0	1/1:1,23:24:72.25:1146,72,0	1/1:0,8:8:24.06:359,24,0	1/1:0,11:11:33.04:483,33,0	1/1:0,27:27:69.24:1102,69,0	0/0:16,0:16:48.16:0,48,671	0/0:13,0:13:39.13:0,39,545	0/0:18,0:18:54.18:0,54,752	1/1:0,15:15:39.13:623,39,0	1/1:1,13:14:42.14:660,42,0	1/1:0,18:18:51.17:809,51,0	1/1:0,5:5:15.05:239,15,0
chr10	53345467	.	GA	G	106.21	PASS	AC=6;AF=0.231;AN=26;BaseQRankSum=0.043;DP=102;FS=0.000;HRun=9;HaplotypeScore=29.7165;InbreedingCoeff=0.5792;MQ=78.95;MQ0=10;MQRankSum=1.603;QD=11.80;ReadPosRankSum=1.518;VQSLOD=1.5048;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:2,0:1:3.01:0,3,35	./.	0/0:27,0:9:18.64:0,19,135	0/0:25,0:10:13.66:0,14,114	./.	0/0:2,0:3:2.98:0,3,21	0/0:1,0:5:11.49:0,11,63	0/0:19,1:16:13.10:0,13,354	0/0:0,0:2:2.84:0,3,14	./.	./.	./.	./.	./.	0/0:2,0:2:6.02:0,6,69	0/0:2,0:1:2.97:0,3,20	1/1:0,3:3:9:82,9,0	1/1:0,3:3:9:82,9,0	./.	./.	1/1:1,2:2:5.96:46,6,0	./.	./.	0/0:3,0:3:9.03:0,9,104	./.	./.	./.	./.
chr10	53349920	.	G	GGT	669.07	PASS	AB=0.946;AC=25;AF=0.500;AN=50;BaseQRankSum=-2.477;DP=535;FS=1.098;HRun=0;HaplotypeScore=88.3117;InbreedingCoeff=0.0791;MQ=70.24;MQ0=7;MQRankSum=1.018;QD=2.02;ReadPosRankSum=-1.280;VQSLOD=1.6574;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:33,1:32:6.02:86,6,0	./.	./.	./.	0/1:16,2:22:8.13:38,0,8	1/1:10,3:14:2.92:43,3,0	0/1:15,1:18:32.18:114,0,32	1/1:16,0:16:2.60:11,3,0	1/1:17,4:22:2.90:44,3,0	1/1:19,0:19:3.01:42,3,0	0/1:22,1:23:25.95:38,0,26	0/0:12,0:13:5.85:0,6,46	0/0:14,0:16:14.70:0,15,121	0/1:19,2:22:2.44:87,0,2	0/0:8,0:8:6.02:0,6,64	0/0:13,0:13:6.01:0,6,64	0/0:12,0:17:6.92:0,7,31	0/0:14,0:14:7.07:0,7,29	1/1:21,0:21:3.01:43,3,0	1/1:11,0:11:3:25,3,0	0/1:26,0:25:29.86:30,0,48	0/1:17,1:17:34.98:35,0,55	0/0:13,0:14:8.85:0,9,78	0/0:23,1:27:14.70:0,15,123	0/1:24,2:26:37.26:119,0,37	1/1:15,2:17:3.01:44,3,0	0/1:15,0:15:17.87:18,0,26	0/1:8,0:8:0.01:0,0,0
chr10	53352096	.	AAGG	A	4786.44	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=15.542;DP=596;FS=0.844;HRun=0;HaplotypeScore=131.0839;InbreedingCoeff=0.9977;MQ=69.98;MQ0=0;MQRankSum=-15.003;QD=42.74;ReadPosRankSum=0.402;VQSLOD=6.2668;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:66.23:0,66,1522	0/0:6,0:6:18.06:0,18,415	0/0:11,0:11:26.37:0,26,515	0/0:16,0:16:37.36:0,37,742	1/1:22,3:25:69.23:1108,69,0	1/1:18,1:19:51.17:830,51,0	1/1:18,1:19:45.14:709,45,0	0/0:28,0:28:84.29:0,84,1911	1/1:20,2:22:60.19:959,60,0	0/0:32,0:32:96.33:0,96,2214	0/0:20,0:20:60.21:0,60,1385	0/0:20,0:20:60.21:0,60,1366	0/0:32,0:32:93.30:0,93,2054	1/1:13,0:13:39.13:638,39,0	0/0:24,0:24:66.21:0,66,1452	0/0:21,0:21:60.20:0,60,1332	0/0:15,0:15:45.15:0,45,1014	0/0:10,0:10:27.05:0,27,573	0/0:21,0:21:63.18:0,63,1288	0/0:29,0:29:87.30:0,87,1988	0/0:20,0:20:60.21:0,60,1375	0/0:36,0:36:99:0,108,2461	0/0:29,0:29:78.25:0,78,1744	0/0:14,0:14:39.13:0,39,900	1/1:12,2:12:33.11:542,33,0	0/0:27,0:27:81.27:0,81,1808	0/0:38,0:38:99:0,109,2458	0/0:11,0:11:29.74:0,30,633
chr10	53352098	.	GGAGT	G	4675.25	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=15.393;DP=586;FS=1.813;HRun=0;HaplotypeScore=142.5769;InbreedingCoeff=0.9980;MQ=71.72;MQ0=0;MQRankSum=-14.967;QD=45.39;ReadPosRankSum=0.457;VQSLOD=5.4810;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:69.24:0,69,1981	0/0:6,0:6:18.06:0,18,522	0/0:12,0:12:29.38:0,29,722	0/0:16,0:16:41.50:0,41,997	1/1:3,21:24:69.13:1058,69,0	1/1:1,16:17:51.17:840,51,0	1/1:3,13:16:48.13:726,48,0	0/0:28,0:28:84.29:0,84,2365	1/1:3,17:20:60.18:925,60,0	0/0:32,0:32:96.33:0,96,2783	0/0:21,0:21:63.22:0,63,1751	0/0:20,0:20:60.21:0,60,1739	0/0:31,0:31:93.29:0,93,2554	1/1:0,13:13:39.13:619,39,0	0/0:23,0:23:69.22:0,69,1937	0/0:20,0:20:60.20:0,60,1666	0/0:15,0:15:45.15:0,45,1260	0/0:12,0:12:33.11:0,33,879	0/0:21,0:21:63.19:0,63,1641	0/0:29,0:29:87.30:0,87,2517	0/0:22,0:22:66.23:0,66,1893	0/0:36,0:36:99:0,108,3067	0/0:27,0:27:78.25:0,78,2192	0/0:13,0:13:39.13:0,39,1130	1/1:2,11:11:33.11:508,33,0	0/0:27,0:27:81.27:0,81,2272	0/0:37,0:37:99:0,109,3084	0/0:11,0:11:29.78:0,30,867
chr10	53352103	.	CA	C	912.49	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=14.843;DP=582;FS=3.144;HRun=1;HaplotypeScore=118.8229;InbreedingCoeff=0.9714;MQ=72.47;MQ0=0;MQRankSum=-13.984;QD=9.12;ReadPosRankSum=0.832;VQSLOD=1.3032;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:69.24:0,69,1095	0/0:6,0:6:18.06:0,18,284	0/0:12,0:12:20.46:0,20,461	0/0:12,0:12:24.38:0,24,424	1/1:3,21:24:24.78:201,25,0	1/1:1,16:17:47.91:238,48,0	1/1:1,13:14:27.40:180,27,0	0/0:26,0:26:78.26:0,78,1222	1/1:2,17:19:16.17:205,16,0	0/0:34,0:34:99:0,99,1582	0/0:19,0:19:57.19:0,57,910	0/0:22,0:22:66.22:0,66,1047	0/0:30,0:30:87.30:0,87,1391	1/1:0,13:13:34.46:166,34,0	0/0:23,0:23:69.24:0,69,1103	0/0:19,0:19:57.19:0,57,911	0/0:14,0:14:39.13:0,39,623	0/0:13,0:13:36.11:0,36,570	0/0:21,0:21:57.19:0,57,887	0/0:30,0:30:90.29:0,90,1415	0/0:22,0:22:66.23:0,66,1051	0/0:37,0:37:99:0,111,1774	0/0:28,0:28:81.26:0,81,1266	0/0:14,0:14:42.14:0,42,672	1/1:2,11:11:5.81:104,6,0	0/0:26,0:26:78.26:0,78,1232	0/0:39,0:39:99:0,111,1769	0/0:11,0:11:30.10:0,30,477
chr10	53352108	.	AGC	A	1725.73	PASS	AB=0.541;AC=11;AF=0.196;AN=56;BaseQRankSum=15.061;DP=582;FS=3.768;HRun=0;HaplotypeScore=125.5193;InbreedingCoeff=0.9414;MQ=73.15;MQ0=0;MQRankSum=-14.449;QD=17.09;ReadPosRankSum=0.154;VQSLOD=3.8461;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:66.21:0,66,1284	0/0:8,0:8:24.08:0,24,472	0/0:14,0:14:25.95:0,26,678	0/0:10,0:10:30.10:0,30,573	1/1:3,21:24:48.64:415,49,0	1/1:1,16:17:49.34:368,49,0	1/1:1,13:14:38.81:292,39,0	0/0:26,0:26:78.26:0,78,1537	0/1:3,17:20:0.40:332,0,0	0/0:34,0:34:99:0,102,2058	0/0:20,0:20:60.21:0,60,1206	0/0:19,0:19:57.20:0,57,1158	0/0:29,0:29:87.30:0,87,1752	1/1:0,13:13:38.85:295,39,0	0/0:24,0:24:72.25:0,72,1459	0/0:19,0:19:57.20:0,57,1158	0/0:16,0:16:48.16:0,48,947	0/0:14,0:14:40.38:0,40,791	0/0:19,0:19:57.20:0,57,1142	0/0:31,0:31:93.32:0,93,1864	0/0:22,0:22:66.23:0,66,1326	0/0:37,0:37:99:0,111,2239	0/0:26,0:26:72.25:0,72,1451	0/0:15,0:15:45.15:0,45,914	1/1:2,11:11:26.88:202,27,0	0/0:24,0:24:72.24:0,72,1409	0/0:41,0:41:99:0,120,2330	0/0:10,0:10:27.09:0,27,549
chr10	53352111	.	ATG	A	1929.91	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=15.271;DP=586;FS=4.356;HRun=0;HaplotypeScore=126.0518;InbreedingCoeff=0.9992;MQ=74.47;MQ0=0;MQRankSum=-14.054;QD=18.21;ReadPosRankSum=-0.925;VQSLOD=3.3688;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:63.22:0,63,1254	0/0:8,0:8:24.08:0,24,473	0/0:15,0:15:45.15:0,45,858	0/0:11,0:11:33.08:0,33,614	1/1:2,21:23:61.46:445,61,0	1/1:3,16:19:52.63:399,53,0	1/1:1,13:14:38.82:295,39,0	0/0:23,0:23:69.23:0,69,1368	1/1:5,17:22:38.85:424,39,0	0/0:34,0:34:99:0,102,2039	0/0:20,0:20:60.21:0,60,1207	0/0:21,0:21:63.22:0,63,1273	0/0:29,0:29:87.30:0,87,1767	1/1:0,13:13:38.85:298,39,0	0/0:24,0:24:72.25:0,72,1463	0/0:19,0:19:57.20:0,57,1158	0/0:16,0:16:48.14:0,48,935	0/0:15,0:15:43.37:0,43,793	0/0:18,0:18:54.19:0,54,1089	0/0:29,0:29:87.30:0,87,1744	0/0:25,0:25:72.23:0,72,1404	0/0:36,0:36:99:0,108,2157	0/0:26,0:26:75.26:0,75,1512	0/0:16,0:16:48.16:0,48,964	1/1:4,11:13:32.88:258,33,0	0/0:23,0:23:69.24:0,69,1403	0/0:40,0:40:99:0,117,2255	0/0:10,0:10:27.09:0,27,548
chr10	53352315	.	C	CT	14341.73	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=6.927;DP=694;FS=1.971;HRun=1;HaplotypeScore=96.7788;InbreedingCoeff=0.9995;MQ=86.41;MQ0=0;MQRankSum=-4.416;QD=40.29;ReadPosRankSum=2.576;VQSLOD=5.2207;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:78.25:0,78,1013	0/0:11,0:11:33.09:0,33,414	0/0:24,0:24:62.06:0,62,700	0/0:25,0:25:58.57:0,59,699	1/1:2,29:31:71.99:929,72,0	1/1:1,38:39:99:1573,105,0	1/1:0,16:16:45.15:675,45,0	0/0:29,0:29:78.20:0,78,969	1/1:0,13:13:36.12:539,36,0	1/1:0,24:24:72.24:1077,72,0	1/1:1,29:30:75.08:1024,75,0	0/0:23,0:23:69.21:0,69,881	0/0:26,0:26:78.25:0,78,1003	1/1:1,28:29:81.27:1214,81,0	0/0:23,0:23:66.20:0,66,843	0/0:26,0:26:78.24:0,78,1000	0/0:20,0:20:54.18:0,54,701	0/0:9,0:9:27.09:0,27,346	1/1:0,20:20:60.20:895,60,0	1/1:3,33:36:99:1410,99,0	1/1:0,20:20:54.18:810,54,0	0/0:28,0:28:72.22:0,72,920	0/0:46,0:46:99:0,126,1602	0/0:21,0:21:60.18:0,60,764	1/1:0,28:28:81.27:1214,81,0	1/1:0,29:29:87.29:1304,87,0	1/1:2,30:33:90.26:1318,90,0	1/1:0,8:8:24.08:360,24,0
chr10	53353370	.	AT	A	6588.39	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=14.212;DP=673;FS=0.992;HRun=10;HaplotypeScore=75.2916;InbreedingCoeff=0.9276;MQ=76.37;MQ0=0;MQRankSum=1.565;QD=18.93;ReadPosRankSum=2.200;VQSLOD=5.7367;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,113,1211	0/0:10,0:10:27.06:0,27,291	0/0:18,1:19:20.87:0,21,207	0/1:11,0:10:13.79:14,0,84	1/1:4,19:24:44.94:391,45,0	1/1:5,22:27:62.97:547,63,0	1/1:0,16:16:44.99:391,45,0	0/0:39,1:40:79.14:0,79,1057	1/1:6,19:25:53.98:469,54,0	1/1:5,20:25:26.77:457,27,0	1/1:1,23:24:59.95:521,60,0	0/0:24,0:24:57.13:0,57,614	0/0:20,0:20:54.10:0,54,577	1/1:5,16:21:47.98:417,48,0	0/0:29,1:30:46.16:0,46,715	0/0:32,0:32:84.03:0,84,887	0/0:25,0:25:69.17:0,69,755	0/0:15,0:15:45.12:0,45,496	1/1:9,18:27:26.78:458,27,0	1/1:8,27:36:76.97:657,77,0	1/1:3,19:22:44.97:391,45,0	0/0:22,0:23:55.70:0,56,601	0/0:22,0:25:59.97:0,60,630	0/0:18,0:18:48.08:0,48,517	1/1:3,13:16:16.40:290,16,0	1/1:4,29:33:86.97:755,87,0	1/1:4,31:35:77.78:677,78,0	1/1:0,6:6:18:156,18,0
chr10	53357231	.	ACCTTAAATC	A	74.20	PASS	AB=0.739;AC=1;AF=0.018;AN=56;BaseQRankSum=0.120;DP=659;FS=6.808;HRun=0;HaplotypeScore=225.7315;InbreedingCoeff=-0.0194;MQ=79.73;MQ0=0;MQRankSum=2.427;QD=4.36;ReadPosRankSum=-1.115;VQSLOD=1.8535;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:66.23:0,66,2805	0/0:7,0:7:21.07:0,21,1030	0/1:11,6:17:99:149,0,1318	0/0:15,0:15:39.13:0,39,1646	0/0:40,0:40:99:0,111,4858	0/0:32,0:32:93.32:0,93,4293	0/0:20,0:20:60.21:0,60,2408	0/0:46,0:46:99:0,132,5701	0/0:33,0:33:99:0,99,4581	0/0:33,0:33:96.33:0,96,4608	0/0:17,0:17:51.18:0,51,2290	0/0:17,0:17:51.18:0,51,2502	0/0:20,0:20:60.21:0,60,2693	0/0:27,0:27:81.28:0,81,3705	0/0:38,0:38:99:0,114,5050	0/0:30,0:30:87.30:0,87,3995	0/0:12,0:12:36.12:0,36,1765	0/0:14,0:14:36.12:0,36,1591	0/0:18,0:18:54.19:0,54,2398	0/0:28,0:28:84.29:0,84,3999	0/0:12,0:12:36.12:0,36,1724	0/0:23,0:23:69.24:0,69,3043	0/0:19,0:19:54.19:0,54,2574	0/0:24,0:24:72.25:0,72,3483	0/0:28,0:28:84.29:0,84,3961	0/0:24,0:24:72.25:0,72,3274	0/0:39,0:39:99:0,117,4985	0/0:4,0:4:12.04:0,12,583
chr10	53357570	.	CCACACA	C	1073.10	PASS	AB=0.947;AC=21;AF=0.404;AN=52;BaseQRankSum=2.000;DP=579;FS=1.763;HRun=0;HaplotypeScore=122.5133;InbreedingCoeff=0.4421;MQ=56.94;MQ0=40;MQRankSum=-0.999;QD=4.95;ReadPosRankSum=-0.620;VQSLOD=2.1662;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:35:31.04:0,31,646	1/1:0,0:1:3.01:43,3,0	./.	0/0:37,0:20:0:0,0,0	0/0:24,0:22:27.07:0,27,574	0/0:20,0:20:24.06:0,24,493	0/0:33,0:30:30.54:0,31,608	1/1:26,4:27:9.27:134,9,0	0/0:22,0:21:30.10:0,30,669	1/1:20,0:19:15.05:289,15,0	1/1:9,0:13:2.68:17,3,0	0/0:21,0:20:12.04:0,12,243	0/1:15,0:15:18.82:19,0,239	0/0:14,0:14:15.04:0,15,343	0/0:10,0:10:9.48:0,9,103	0/1:7,0:5:11.08:11,0,136	0/1:33,0:33:68.18:68,0,231	0/1:13,0:13:25.95:26,0,44	1/1:11,0:10:3.01:52,3,0	./.	1/1:31,0:31:12.04:225,12,0	0/0:21,0:19:15.05:0,15,362	0/0:16,0:14:15.02:0,15,266	0/0:36,0:36:53.91:0,54,1356	0/0:22,0:20:21.07:0,21,446	0/1:7,0:9:56.80:72,0,57	1/1:21,0:21:17.13:253,17,0	1/1:7,0:6:5.93:40,6,0
chr10	53357654	.	A	AGTGT	2389.34	PASS	AB=1.000;AC=12;AF=0.231;AN=52;BaseQRankSum=-0.028;DP=767;FS=13.739;HRun=0;HaplotypeScore=138.3215;InbreedingCoeff=0.6871;MQ=69.63;MQ0=36;MQRankSum=-1.489;QD=13.58;ReadPosRankSum=-1.537;VQSLOD=2.2983;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:87.41:0,87,1454	0/0:5,0:5:15.05:0,15,261	0/0:67,0:21:54.69:0,55,551	0/0:88,0:26:52.16:0,52,728	1/1:27,0:26:50.51:700,51,0	./.	1/1:3,14:21:3.01:70,3,0	1/1:43,0:43:8.56:59,9,0	0/1:21,0:21:9.33:580,0,9	1/1:12,0:20:8.37:38,8,0	0/0:23,0:23:24.30:0,24,221	0/0:22,0:21:43.40:0,43,683	0/0:19,0:19:30.30:0,30,385	1/1:25,0:25:54.18:1088,54,0	0/0:15,0:14:33.09:0,33,539	0/0:19,0:18:47.96:0,48,779	0/0:34,0:34:84.14:0,84,1268	0/0:16,0:13:30.10:0,30,459	0/0:16,0:16:17.15:0,17,147	0/0:25,0:24:12.97:0,13,203	0/0:26,0:23:10.36:0,10,106	0/0:22,0:22:39.15:0,39,519	0/0:18,0:18:33.03:0,33,474	0/0:42,0:40:65.50:0,66,916	./.	0/1:18,0:14:16.99:17,0,23	0/0:32,0:32:22.42:0,22,403	0/0:10,0:8:5.08:0,5,18
chr10	53358109	.	AT	A	4833.92	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=12.034;DP=702;FS=4.833;HRun=3;HaplotypeScore=67.4344;InbreedingCoeff=0.9789;MQ=85.93;MQ0=0;MQRankSum=-2.759;QD=33.34;ReadPosRankSum=3.088;VQSLOD=5.4550;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,132,1855	0/0:11,0:11:30.07:0,30,410	0/0:27,0:27:73.04:0,73,967	0/0:17,0:17:41.13:0,41,535	1/1:0,17:17:48.15:595,48,0	1/1:1,19:20:42.13:521,42,0	1/1:0,29:29:84.26:1041,84,0	0/0:28,0:28:84.27:0,84,1194	1/1:0,13:13:39.12:483,39,0	0/0:29,0:29:87.28:0,87,1218	0/0:20,0:20:57.19:0,57,821	0/0:26,0:26:78.25:0,78,1105	0/0:25,0:25:75.25:0,75,1080	1/1:1,38:39:99:1227,99,0	0/0:35,0:35:99:0,105,1494	0/0:31,0:31:93.30:0,93,1319	0/0:24,0:24:72.19:0,72,1012	0/0:16,0:16:45.13:0,45,628	0/0:27,0:27:81.24:0,81,1115	0/0:23,0:23:63.20:0,63,891	0/0:45,0:45:99:0,135,1942	0/0:24,0:24:69.20:0,69,942	0/0:21,0:21:60.17:0,60,811	0/0:28,0:28:78.26:0,78,1121	1/1:0,27:27:78.25:967,78,0	0/0:24,0:24:69.23:0,69,993	0/0:29,0:29:84.27:0,84,1189	0/0:2,0:2:6.02:0,6,86
chr10	53358423	.	T	TC	13681.29	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-14.032;DP=691;FS=17.594;HRun=1;HaplotypeScore=68.2595;InbreedingCoeff=0.9918;MQ=88.09;MQ0=0;MQRankSum=-4.054;QD=40.12;ReadPosRankSum=1.261;VQSLOD=3.2350;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,126,1618	0/0:9,0:9:24.08:0,24,312	0/0:29,0:29:78.04:0,78,898	0/0:21,0:21:60.16:0,60,752	1/1:0,14:14:42.14:629,42,0	1/1:1,22:23:63.21:944,63,0	1/1:2,24:26:57.19:854,57,0	0/0:29,0:29:81.26:0,81,1041	1/1:1,29:30:81.27:1214,81,0	1/1:2,23:25:72.24:1072,72,0	1/1:0,17:17:39.13:585,39,0	0/0:27,0:27:78.21:0,78,969	0/0:32,0:32:93.29:0,93,1191	1/1:0,37:37:99:1529,102,0	0/0:28,0:28:78.25:0,78,1013	0/0:16,0:16:48.14:0,48,608	0/0:28,0:28:81.21:0,81,1014	0/0:18,0:18:54.13:0,54,682	1/1:1,19:20:57.16:829,57,0	1/1:0,19:19:54.18:809,54,0	1/1:1,32:33:84.28:1259,84,0	0/0:22,0:22:57.19:0,57,739	0/0:18,0:18:51.17:0,51,661	0/0:30,0:30:90.29:0,90,1169	1/1:1,18:19:51.17:765,51,0	1/1:0,34:34:99:1506,102,0	1/1:2,35:38:99:1552,105,0	1/1:0,6:6:9.03:135,9,0
chr10	53360126	.	G	GA	5515.27	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-0.571;DP=599;FS=5.965;HRun=8;HaplotypeScore=62.9676;InbreedingCoeff=0.9855;MQ=80.57;MQ0=0;MQRankSum=-1.278;QD=28.88;ReadPosRankSum=0.575;VQSLOD=5.1150;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:62.02:0,62,547	0/0:9,0:9:27.01:0,27,247	0/0:19,0:19:12.34:0,12,199	0/0:14,0:15:27.01:0,27,246	0/0:43,0:43:99:0,114,1043	0/0:34,0:34:81.01:0,81,736	0/0:18,0:18:47.99:0,48,429	0/0:33,0:33:84.02:0,84,761	0/0:22,0:22:42.01:0,42,384	1/1:0,23:23:66.18:751,66,0	1/1:2,26:28:75.22:865,75,0	0/0:18,0:18:48.02:0,48,439	0/0:19,1:20:19.41:0,19,432	0/0:9,0:9:27.01:0,27,247	0/0:20,0:20:53.99:0,54,482	0/0:20,0:20:54.03:0,54,494	0/0:23,0:23:51.02:0,51,466	0/0:9,0:9:24.01:0,24,220	1/1:4,20:24:60.16:682,60,0	1/1:3,27:31:87.05:967,87,0	1/1:3,15:18:36.11:415,36,0	0/0:26,0:26:71.98:0,72,642	0/0:20,0:20:51:0,51,461	0/0:4,0:4:12.01:0,12,110	0/0:23,0:23:60.02:0,60,549	1/1:5,29:34:87.23:983,87,0	1/1:2,24:26:60.01:692,60,0	1/1:0,7:7:15.01:159,15,0
chr10	53360390	.	C	CCCAA	8246.79	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=16.107;DP=643;FS=3.278;HRun=0;HaplotypeScore=115.4004;InbreedingCoeff=0.9938;MQ=90.46;MQ0=0;MQRankSum=-14.218;QD=56.48;ReadPosRankSum=-0.066;VQSLOD=5.7586;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,144,2698	0/0:8,0:8:24.08:0,24,465	0/0:30,0:30:78.25:0,78,1454	0/0:25,0:25:72.25:0,72,1315	0/0:30,0:30:81.26:0,81,1526	0/0:16,0:16:48.16:0,48,922	0/0:23,0:23:63.20:0,63,1176	0/0:29,0:29:75.26:0,75,1446	0/0:35,0:35:99:0,105,1972	1/1:0,23:25:69.16:1658,69,0	1/1:6,12:18:45.50:987,45,0	0/0:26,0:26:78.23:0,78,1404	0/0:15,0:15:42.14:0,42,805	0/0:17,0:17:51.16:0,51,953	0/0:33,0:33:96.32:0,96,1820	0/0:28,0:28:84.27:0,84,1577	0/0:32,0:32:96.31:0,96,1802	0/0:16,0:16:45.11:0,45,784	1/1:0,15:17:51.15:1163,51,0	1/1:2,20:23:51.11:1220,51,0	1/1:2,14:16:21.07:489,21,0	0/0:23,0:23:69.24:0,69,1310	0/0:26,0:26:75.26:0,75,1436	0/0:17,0:17:48.16:0,48,921	0/0:18,0:18:51.17:0,51,980	1/1:3,13:16:48.07:1069,48,0	1/1:2,24:27:54.18:1351,54,0	1/1:0,4:4:12.04:309,12,0
chr10	53361755	.	T	TA	5174.65	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=2.897;DP=550;FS=14.043;HRun=5;HaplotypeScore=66.5440;InbreedingCoeff=0.9924;MQ=74.42;MQ0=0;MQRankSum=-0.957;QD=32.96;ReadPosRankSum=0.406;VQSLOD=4.0444;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:48.12:0,48,516	0/0:6,0:6:15.04:0,15,161	0/0:10,0:10:24.06:0,24,258	0/0:10,0:10:27.02:0,27,270	0/0:24,0:24:63.16:0,63,677	0/0:30,0:30:90.19:0,90,950	0/0:9,0:9:15.03:0,15,161	0/0:30,0:30:78.19:0,78,833	0/0:20,0:20:57.13:0,57,605	1/1:1,22:23:63.19:815,63,0	1/1:0,18:18:51.17:671,51,0	0/0:22,0:22:60.15:0,60,642	0/0:23,0:23:66.17:0,66,708	0/0:20,0:20:57.14:0,57,612	0/0:25,0:25:63.11:0,63,659	0/0:29,0:29:78.19:0,78,838	0/0:32,0:32:90.22:0,90,965	0/0:15,0:15:42.09:0,42,442	1/1:2,14:16:42.12:538,42,0	1/1:4,21:25:57.18:743,57,0	1/1:1,12:13:30.10:395,30,0	0/0:21,0:21:57.14:0,57,612	0/0:17,0:17:42.09:0,42,443	0/0:6,0:6:18:0,18,181	0/0:22,0:22:66.17:0,66,709	1/1:4,19:23:57.19:750,57,0	1/1:1,30:31:72.23:947,72,0	1/1:0,8:8:24.08:316,24,0
chr10	53362221	.	TGAGGTTACATAA	T	10334.76	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=14.772;DP=638;FS=2.423;HRun=0;HaplotypeScore=220.9774;InbreedingCoeff=0.9995;MQ=86.42;MQ0=0;MQRankSum=-15.187;QD=77.70;ReadPosRankSum=-0.669;VQSLOD=4.5734;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,117,7113	0/0:11,0:11:33.11:0,33,2010	0/0:17,0:17:51.17:0,51,2845	0/0:29,0:29:72.25:0,72,4190	1/1:7,20:27:45.15:1602,45,0	1/1:4,24:28:57.20:2131,57,0	1/1:0,14:14:42.14:1578,42,0	0/0:21,0:21:60.21:0,60,3341	1/1:1,26:27:60.21:2279,60,0	0/0:29,0:29:81.28:0,81,4721	0/0:14,0:14:42.14:0,42,2495	0/0:19,0:19:54.19:0,54,3041	0/0:20,0:20:57.20:0,57,3496	1/1:5,20:25:51.18:1918,51,0	0/0:27,0:27:81.28:0,81,4880	0/0:21,0:21:63.22:0,63,3846	0/0:18,0:18:54.19:0,54,3326	0/0:15,0:15:45.15:0,45,2754	0/0:19,0:19:57.18:0,57,2966	0/0:25,0:25:75.26:0,75,4580	0/0:38,0:38:99:0,114,6918	0/0:24,0:24:69.22:0,69,3855	0/0:14,0:14:42.14:0,42,2567	0/0:26,0:26:72.25:0,72,4405	1/1:3,9:12:24.08:827,24,0	0/0:26,0:26:75.24:0,75,4413	0/0:38,0:38:99:0,114,6725	0/0:12,0:12:36.12:0,36,2220
chr10	53362718	.	A	AT	4803.08	PASS	AB=0.538;AC=15;AF=0.268;AN=56;BaseQRankSum=11.195;DP=536;FS=3.837;HRun=7;HaplotypeScore=63.0070;InbreedingCoeff=0.9087;MQ=74.97;MQ0=0;MQRankSum=-3.223;QD=29.11;ReadPosRankSum=0.234;VQSLOD=5.4384;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:48.06:0,48,458	0/0:12,0:12:30.03:0,30,285	0/0:11,0:11:24.45:0,24,219	0/0:13,0:13:30.04:0,30,288	0/0:26,0:26:72.11:0,72,691	0/0:23,0:23:60.09:0,60,579	0/0:8,0:8:21.03:0,21,203	0/0:34,0:34:90.14:0,90,866	0/0:15,0:15:45.06:0,45,430	1/1:3,20:23:60.17:713,60,0	1/1:4,21:25:60.17:710,60,0	0/0:20,0:20:57.05:0,57,540	0/0:23,0:23:69.08:0,69,655	0/0:20,0:20:57.09:0,57,550	0/0:29,0:29:87.11:0,87,829	0/0:28,0:28:72.11:0,72,695	0/0:15,0:15:42.04:0,42,398	0/0:10,0:10:30.05:0,30,290	1/1:4,16:20:48.15:580,48,0	1/1:7,24:31:72.22:869,72,0	1/1:2,4:6:12.04:145,12,0	0/0:9,0:9:24.04:0,24,232	0/0:19,0:19:45.07:0,45,435	0/0:11,0:11:27:0,27,248	0/0:28,0:28:75.10:0,75,721	1/1:3,24:27:72.17:824,72,0	1/1:2,24:25:66.20:797,66,0	0/1:1,6:7:10.90:163,0,11
chr10	53362895	.	TA	T	1055.96	PASS	AC=2;AF=0.037;AN=54;BaseQRankSum=6.498;DP=650;FS=0.675;HRun=1;HaplotypeScore=64.3077;InbreedingCoeff=0.9919;MQ=74.58;MQ0=0;MQRankSum=-2.055;QD=36.41;ReadPosRankSum=-4.552;VQSLOD=2.1824;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:78.27:0,78,1243	0/0:6,0:6:18.06:0,18,288	0/0:15,0:15:42.13:0,42,628	0/0:18,0:17:39.41:0,39,673	0/0:33,0:33:99:0,99,1531	0/0:25,0:25:75.26:0,75,1193	0/0:17,0:17:51.16:0,51,791	1/1:0,29:29:87.25:1151,87,0	0/0:24,0:24:72.25:0,72,1151	0/0:36,0:36:99:0,108,1704	0/0:17,0:16:51.16:0,51,780	0/0:19,0:19:57.18:0,57,888	0/0:30,0:30:90.28:0,90,1392	0/0:32,0:32:96.33:0,96,1531	0/0:27,0:27:81.28:0,81,1294	0/0:29,0:29:87.30:0,87,1377	0/0:19,0:19:57.17:0,57,879	0/0:15,0:15:42.14:0,42,671	0/0:23,0:23:69.24:0,69,1100	0/0:31,0:31:93.29:0,93,1436	0/0:20,0:20:60.20:0,60,958	0/0:24,0:24:72.23:0,72,1128	0/0:19,0:19:57.18:0,57,888	0/0:25,0:25:75.24:0,75,1172	0/0:27,0:27:81.25:0,81,1268	0/0:26,0:26:78.25:0,78,1197	0/0:38,0:38:99:0,114,1790	./.
chr10	53365350	.	T	TA	4754.03	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-1.101;DP=459;FS=1.814;HRun=7;HaplotypeScore=51.3019;InbreedingCoeff=0.9617;MQ=64.75;MQ0=3;MQRankSum=-1.078;QD=28.47;ReadPosRankSum=0.831;VQSLOD=5.4269;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:53.87:0,54,505	0/0:12,0:12:23.93:0,24,212	0/0:6,0:5:14.63:0,15,114	0/0:4,0:4:6:0,6,52	0/0:23,0:23:53.97:0,54,507	0/0:28,0:28:78.10:0,78,742	0/0:7,0:7:15.02:0,15,145	0/0:33,0:33:78.07:0,78,734	0/0:17,0:17:39.05:0,39,376	1/1:2,18:21:54.15:634,54,0	1/1:0,13:13:39.12:469,39,0	0/0:18,0:18:54.09:0,54,521	0/0:14,0:14:33.03:0,33,312	0/0:20,0:20:57.07:0,57,545	0/0:13,0:13:33.05:0,33,318	0/0:8,0:8:21.02:0,21,199	1/1:5,23:28:51.11:597,51,0	1/1:3,19:22:51.16:614,51,0	1/1:1,14:15:42.07:476,42,0	1/1:1,18:19:54.13:635,54,0	1/1:2,8:10:15.05:181,15,0	0/0:4,0:4:12.02:0,12,116	0/0:26,0:26:66.11:0,66,637	0/0:8,0:8:17.99:0,18,165	0/0:27,0:27:53.62:0,54,505	1/1:1,14:15:42.10:482,42,0	1/1:2,17:19:48.06:558,48,0	1/1:2,3:3:9.03:108,9,0
chr10	53366340	.	CACAG	C	1915.33	PASS	AB=0.992;AC=22;AF=0.393;AN=56;BaseQRankSum=2.337;DP=617;FS=1.891;HRun=0;HaplotypeScore=125.7736;InbreedingCoeff=0.4998;MQ=56.77;MQ0=26;MQRankSum=0.264;QD=7.26;ReadPosRankSum=-1.626;VQSLOD=2.7313;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:38.42:0,38,463	0/0:8,0:8:17.90:0,18,192	0/0:36,0:13:12.69:0,13,138	0/0:41,0:14:19.52:0,20,155	0/0:23,0:22:31.99:0,32,265	0/0:26,0:26:8.48:0,8,423	0/0:21,0:20:20.91:0,21,201	0/0:30,0:27:61.64:0,62,577	0/1:21,0:18:26.18:26,0,163	1/1:14,0:12:30:279,30,0	1/1:1,10:11:6.02:77,6,0	0/0:17,0:17:47.25:0,47,570	0/0:22,0:22:46.03:0,46,564	0/1:28,0:28:42.89:43,0,339	0/0:28,0:27:62.69:0,63,734	0/0:22,0:21:34.78:0,35,640	1/1:18,0:17:15.33:143,15,0	0/1:18,0:18:19.70:170,0,20	1/1:10,7:12:8.32:166,8,0	1/1:18,0:18:17.06:160,17,0	1/1:25,0:24:38.45:308,38,0	0/0:23,0:22:47.71:0,48,524	0/1:20,1:20:15.06:15,0,321	0/0:36,0:36:89.62:0,90,1109	0/1:21,0:20:12.48:12,0,193	1/1:3,20:22:55.82:474,56,0	1/1:23,0:20:6.35:113,6,0	0/1:6,0:6:13.61:129,0,14
chr10	53366342	.	CAG	C	1674.86	PASS	AB=0.992;AC=22;AF=0.393;AN=56;BaseQRankSum=1.911;DP=615;FS=0.000;HRun=0;HaplotypeScore=108.7733;InbreedingCoeff=0.4769;MQ=55.85;MQ0=27;MQRankSum=0.985;QD=6.52;ReadPosRankSum=-1.108;VQSLOD=2.9601;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:19:18.01:0,18,381	0/0:8,0:8:9.24:0,9,148	0/0:34,0:12:12:0,12,135	0/0:41,0:14:19.87:0,20,158	0/1:24,0:23:31.53:32,0,228	0/0:26,0:26:56.84:0,57,548	0/0:22,0:21:15.63:0,16,194	0/0:29,0:26:62.77:0,63,585	0/1:20,1:18:38.48:38,0,169	1/1:15,0:13:29.06:261,29,0	1/1:11,0:11:3.81:19,4,0	0/0:17,0:17:29.22:0,29,419	0/0:22,0:22:23.11:0,23,440	0/0:28,0:28:40.42:0,40,413	0/0:29,0:28:28.27:0,28,508	0/0:23,0:22:39.43:0,39,571	1/1:17,0:16:14.65:141,15,0	0/1:16,0:16:18.34:169,0,18	1/1:16,0:11:1.01:125,1,0	1/1:18,0:18:2.06:161,2,0	1/1:25,0:24:41.13:323,41,0	0/0:22,0:21:12.41:0,12,440	0/1:20,0:19:0.62:1,0,268	0/0:37,0:37:47.03:0,47,831	0/1:22,0:21:10.64:11,0,285	1/1:23,0:22:37.26:422,37,0	1/1:5,18:20:8.89:94,9,0	0/1:6,0:6:6.89:66,0,7
chr10	53366344	.	G	GAC	1062.33	PASS	AB=0.936;AC=26;AF=0.500;AN=52;BaseQRankSum=-2.003;DP=622;FS=6.936;HRun=0;HaplotypeScore=119.7828;InbreedingCoeff=0.0138;MQ=55.67;MQ0=27;MQRankSum=0.532;QD=2.60;ReadPosRankSum=-3.179;VQSLOD=1.0305;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:20:8.46:0,8,95	0/0:8,0:8:6.90:0,7,61	./.	./.	1/1:21,0:20:3.61:26,4,0	0/1:16,11:27:46.20:159,0,46	0/1:23,0:21:4.14:30,0,4	1/1:29,0:25:0.47:1,0,0	1/1:18,3:18:12.01:138,12,0	1/1:16,0:14:5.98:63,6,0	1/1:13,0:13:5.93:57,6,0	0/0:18,0:18:8.23:0,8,70	0/0:18,0:19:12.91:0,13,133	0/1:20,9:29:86.21:153,0,86	0/1:29,0:29:17.22:17,0,166	0/1:19,1:20:26.33:26,0,116	0/1:15,0:14:0:0,0,0	0/0:16,0:16:3.01:0,3,31	1/1:17,0:12:3.01:42,3,0	0/1:19,0:20:57.38:77,0,57	1/1:26,0:25:8.69:74,9,0	0/0:24,0:24:17.99:0,18,179	0/1:21,0:20:15.96:16,0,57	0/0:33,0:37:40.46:0,40,350	0/1:19,4:21:7.64:232,0,8	0/1:28,0:26:23.44:37,0,23	0/1:21,1:20:2.73:33,0,3	0/1:6,0:6:11.71:36,0,12
chr10	53366937	.	GA	G	8724.86	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=13.910;DP=625;FS=3.215;HRun=9;HaplotypeScore=81.6431;InbreedingCoeff=0.9290;MQ=71.85;MQ0=3;MQRankSum=0.534;QD=23.52;ReadPosRankSum=3.634;VQSLOD=5.6742;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:60.13:0,60,659	0/0:17,0:17:48.14:0,48,554	0/0:25,0:19:5.59:0,6,263	0/0:15,1:14:5.61:0,6,235	1/1:4,41:45:99:1125,123,0	1/1:1,19:20:51.03:467,51,0	1/1:0,12:12:27.01:247,27,0	0/0:36,0:36:87.11:0,87,942	1/1:3,23:26:22.41:460,22,0	1/1:3,31:34:89.99:809,90,0	1/1:4,36:40:99:1002,111,0	0/0:22,0:22:63.11:0,63,691	0/0:17,0:17:45.12:0,45,510	1/1:2,14:16:39.02:357,39,0	0/0:23,0:23:63.19:0,63,727	0/0:17,0:17:48.14:0,48,554	1/1:2,21:23:60.03:549,60,0	1/1:3,3:6:5.99:55,6,0	1/1:2,22:24:57.72:586,58,0	1/1:3,20:23:60.03:548,60,0	1/1:2,17:19:51.91:469,52,0	0/0:28,0:28:75.14:0,75,843	0/0:18,0:18:51.10:0,51,573	0/0:12,0:12:30.07:0,30,336	1/1:1,22:23:56.98:522,57,0	1/1:2,28:30:84.02:762,84,0	1/1:0,28:28:81.04:741,81,0	1/1:0,2:2:3:27,3,0
chr10	53368618	.	AGAGT	A	9924.52	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=18.133;DP=613;FS=2.516;HRun=0;HaplotypeScore=117.1216;InbreedingCoeff=0.9982;MQ=85.08;MQ0=1;MQRankSum=-8.228;QD=48.41;ReadPosRankSum=3.663;VQSLOD=5.8127;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:75.24:0,75,2028	0/0:8,0:8:24.08:0,24,672	0/0:22,0:22:63.22:0,63,1651	0/0:20,0:20:60.19:0,60,1455	0/0:26,0:26:78.27:0,78,2147	0/0:27,0:27:81.26:0,81,2185	0/0:18,0:18:54.17:0,54,1406	0/0:30,0:30:87.30:0,87,2404	0/0:14,0:14:42.14:0,42,1175	1/1:0,24:24:69.24:1368,69,0	1/1:1,21:22:45.13:888,45,0	0/0:15,0:15:45.14:0,45,1200	0/0:24,0:24:72.25:0,72,2014	0/0:13,0:13:36.12:0,36,1007	0/0:21,0:20:63.20:0,63,1664	0/0:17,0:17:51.18:0,51,1383	1/1:1,20:21:47.84:957,48,0	1/1:0,6:6:18.06:359,18,0	1/1:2,13:15:39.08:702,39,0	1/1:0,38:38:90.31:1770,90,0	1/1:2,20:22:54.19:1078,54,0	0/0:26,0:26:78.27:0,78,2119	0/0:25,0:25:75.26:0,75,2081	0/0:38,0:38:99:0,114,2969	0/0:37,0:37:99:0,111,3087	1/1:0,21:21:63.22:1247,63,0	1/1:0,26:26:54.19:1077,54,0	1/1:0,9:9:24.08:479,24,0
chr10	53370193	.	CCA	C	1712.45	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=3.004;DP=481;FS=12.720;HRun=0;HaplotypeScore=63.1931;InbreedingCoeff=0.9575;MQ=62.66;MQ0=6;MQRankSum=0.708;QD=22.24;ReadPosRankSum=4.472;VQSLOD=3.2956;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:81.95:0,82,1193	0/0:9,0:8:11.98:0,12,110	0/0:53,0:20:30.35:0,30,406	0/0:25,0:8:14.92:0,15,148	1/1:0,14:14:32.86:383,33,0	1/1:0,21:21:36.12:508,36,0	1/1:0,8:8:18.06:255,18,0	0/0:22,0:22:60.60:0,61,424	1/1:1,11:12:15:187,15,0	0/0:19,0:18:53.32:0,53,647	0/0:16,0:16:44:0,44,561	0/0:17,0:16:44.50:0,44,491	0/0:17,0:17:47.75:0,48,649	1/1:0,8:8:15.05:209,15,0	0/0:18,0:17:51.08:0,51,760	0/0:8,0:8:23.09:0,23,362	0/0:20,0:20:26.95:0,27,246	0/0:11,0:11:29.65:0,30,265	0/0:18,0:16:45.08:0,45,590	0/0:22,0:19:25.47:0,25,568	0/0:8,0:8:20.85:0,21,255	0/0:18,0:18:45:0,45,674	0/0:13,0:13:34.72:0,35,371	0/0:18,0:18:50.86:0,51,698	1/1:0,14:14:27:356,27,0	0/0:16,0:16:17.86:0,18,384	0/0:25,0:25:31.65:0,32,909	0/0:2,0:2:6.02:0,6,97
chr10	53370194	.	C	CCCA	506.40	PASS	AB=0.778;AC=4;AF=0.071;AN=56;BaseQRankSum=1.743;DP=480;FS=1.489;HRun=0;HaplotypeScore=79.7449;InbreedingCoeff=0.1163;MQ=62.90;MQ0=6;MQRankSum=-0.241;QD=6.41;ReadPosRankSum=-4.800;VQSLOD=0.6219;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:29:70.45:0,70,922	0/0:7,0:7:5.57:0,6,42	0/0:53,0:20:9.48:0,9,324	0/1:23,0:7:3.87:4,0,90	0/0:14,0:14:32.31:0,32,202	0/0:21,0:21:35.47:0,35,227	0/0:8,0:8:17.74:0,18,113	0/1:5,2:24:0.84:329,0,1	0/0:11,0:12:14.78:0,15,96	0/0:20,0:19:41.62:0,42,507	0/0:15,0:16:39.04:0,39,494	0/0:17,0:16:44.88:0,45,471	0/0:17,0:17:41.94:0,42,530	0/0:8,0:8:14.80:0,15,97	0/0:17,0:16:40.83:0,41,544	0/0:7,0:8:24.06:0,24,333	0/1:9,9:21:44.58:87,0,45	0/1:10,1:11:21.57:188,0,22	0/0:19,0:17:29.76:0,30,407	0/0:22,0:19:41.08:0,41,490	0/0:8,0:8:20.66:0,21,214	0/0:18,0:18:45.11:0,45,589	0/0:12,0:13:36.06:0,36,397	0/0:18,0:18:38.37:0,38,561	0/0:14,0:14:26.61:0,27,172	0/0:16,0:16:38.87:0,39,422	0/0:24,0:24:36.37:0,36,731	0/0:2,0:2:6.02:0,6,77
chr10	53370347	.	T	TA	6114.66	PASS	AB=1.000;AC=53;AF=0.946;AN=56;BaseQRankSum=1.287;DP=193;FS=0.000;HRun=5;HaplotypeScore=117.6458;InbreedingCoeff=0.3175;MQ=49.17;MQ0=0;MQRankSum=-1.732;QD=32.35;ReadPosRankSum=1.685;VQSLOD=3.7534;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,5:6:12.04:190,12,0	1/1:0,3:3:9.03:143,9,0	0/0:4,0:4:1.33:0,1,10	0/1:2,0:1:0:0,0,0	1/1:1,9:10:20.90:271,21,0	1/1:2,9:11:23.67:203,24,0	1/1:1,2:2:3.01:48,3,0	1/1:1,6:4:6.02:96,6,0	1/1:2,11:12:33.03:482,33,0	1/1:0,6:6:18.06:287,18,0	1/1:0,10:10:29.76:353,30,0	1/1:1,9:10:24.08:369,24,0	1/1:4,13:16:36.12:550,36,0	1/1:0,7:6:18.06:285,18,0	1/1:0,10:8:24.01:350,24,0	1/1:0,7:7:20.93:262,21,0	1/1:0,3:3:8.94:112,9,0	1/1:0,2:2:6.02:96,6,0	1/1:0,5:4:9.03:143,9,0	1/1:0,5:5:14.96:192,15,0	1/1:0,3:3:2.92:17,3,0	1/1:0,11:11:27.01:395,27,0	1/1:0,3:3:6.02:95,6,0	1/1:3,2:5:6.02:73,6,0	1/1:1,3:4:8.88:82,9,0	1/1:0,8:8:24.08:382,24,0	1/1:3,12:15:35.95:496,36,0	1/1:0,3:3:9.03:143,9,0
chr10	53370392	.	A	AGG	4930.15	PASS	AB=0.556;AC=49;AF=0.907;AN=54;BaseQRankSum=3.293;DP=201;FS=13.010;HRun=0;HaplotypeScore=123.0312;InbreedingCoeff=0.3657;MQ=38.63;MQ0=65;MQRankSum=-2.860;QD=28.83;ReadPosRankSum=2.932;VQSLOD=6.0775;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,4:4:12.04:176,12,0	1/1:0,2:2:6.02:89,6,0	0/0:17,0:3:6.02:0,6,88	0/0:8,0:4:9.02:0,9,115	1/1:3,6:6:18.06:261,18,0	1/1:3,3:3:9.03:132,9,0	1/1:0,4:2:6.02:76,6,0	1/1:6,4:1:3.01:47,3,0	1/1:1,8:8:24.08:352,24,0	1/1:2,4:3:9.03:136,9,0	1/1:1,2:2:6.02:85,6,0	1/1:1,8:8:24.08:348,24,0	1/1:1,13:14:42.14:589,42,0	1/1:1,2:2:6.02:88,6,0	1/1:1,6:5:15.05:204,15,0	1/1:0,8:8:24.08:353,24,0	1/1:4,2:2:6.02:90,6,0	1/1:1,1:1:3.01:46,3,0	1/1:6,1:1:3.01:46,3,0	0/1:1,4:5:4.42:145,0,4	./.	1/1:0,8:8:24.08:350,24,0	1/1:0,5:5:15.04:199,15,0	1/1:3,2:2:2.95:45,3,0	1/1:0,2:2:6.02:88,6,0	1/1:2,7:7:21.07:319,21,0	1/1:3,11:12:36.12:538,36,0	1/1:4,2:3:9.03:130,9,0
chr10	53370394	.	A	AT	2948.67	PASS	AC=50;AF=0.926;AN=54;BaseQRankSum=3.739;DP=204;FS=12.974;HRun=0;HaplotypeScore=128.2970;InbreedingCoeff=0.4172;MQ=38.35;MQ0=68;MQRankSum=-3.137;QD=16.95;ReadPosRankSum=2.727;VQSLOD=5.3057;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,4:4:12.02:112,12,0	1/1:0,2:2:6.01:56,6,0	0/0:17,0:3:6.02:0,6,84	0/0:7,0:4:8.98:0,9,82	1/1:4,6:6:18.02:164,18,0	1/1:3,3:3:9.01:83,9,0	1/1:0,4:2:5.88:44,6,0	1/1:6,4:1:3.01:31,3,0	1/1:1,8:8:24.03:223,24,0	1/1:2,4:3:9.01:85,9,0	1/1:1,2:2:6.01:54,6,0	1/1:2,8:8:24.03:225,24,0	1/1:1,13:14:40.16:349,40,0	1/1:1,2:2:6.01:55,6,0	1/1:1,6:5:14.85:125,15,0	1/1:0,8:8:24.03:223,24,0	1/1:4,2:2:6.01:58,6,0	1/1:1,1:1:3.01:30,3,0	1/1:6,1:1:3.01:30,3,0	1/1:1,4:5:14.68:111,15,0	./.	1/1:0,8:8:24.03:221,24,0	1/1:1,4:5:7.59:94,8,0	1/1:3,2:2:3:29,3,0	1/1:1,2:2:6.01:55,6,0	1/1:3,7:7:21.04:207,21,0	1/1:3,12:12:35.90:317,36,0	1/1:4,2:3:9.01:83,9,0
chr10	53370409	.	T	TA	3055.68	PASS	AB=0.955;AC=44;AF=0.846;AN=52;BaseQRankSum=-1.926;DP=239;FS=11.012;HRun=0;HaplotypeScore=138.1888;InbreedingCoeff=0.3298;MQ=32.01;MQ0=91;MQRankSum=-0.697;QD=14.48;ReadPosRankSum=6.426;VQSLOD=4.6633;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,2:5:7.68:60,8,0	1/1:1,2:3:4.91:71,5,0	0/0:7,0:2:6.01:0,6,68	0/1:9,0:3:22.25:22,0,55	1/1:6,5:7:9.03:107,9,0	1/1:4,3:4:7.26:117,7,0	1/1:3,5:4:6.02:75,6,0	1/1:10,2:2:6.02:83,6,0	1/1:4,6:7:16.68:199,17,0	1/1:4,4:5:11.53:134,12,0	./.	1/1:4,6:8:5.45:145,5,0	1/1:3,14:16:39.30:456,39,0	0/0:4,0:2:1.36:0,1,3	1/1:5,3:5:4.50:110,4,0	1/1:1,9:10:25.97:338,26,0	1/1:6,3:3:9.02:108,9,0	1/1:1,2:2:3.01:42,3,0	0/1:7,0:1:0:0,0,0	1/1:2,2:5:9.01:99,9,0	./.	1/1:2,7:9:13.94:181,14,0	1/1:2,4:6:10.23:125,10,0	1/1:7,1:2:3.01:39,3,0	1/1:1,3:3:9.01:103,9,0	1/1:7,6:9:17.01:202,17,0	1/1:7,10:12:28.80:349,29,0	0/0:5,0:2:0.89:0,1,2
chr10	53370565	.	AC	A	1926.70	PASS	AC=18;AF=1.000;AN=18;DP=305;FS=0.000;HRun=1;HaplotypeScore=140.8855;MQ=13.07;MQ0=238;QD=24.39;VQSLOD=3.4584;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	1/1:0,4:4:12.04:144,12,0	./.	./.	1/1:1,7:7:18.06:215,18,0	./.	./.	./.	./.	1/1:2,2:2:6.02:72,6,0	1/1:0,12:12:36.03:399,36,0	./.	./.	./.	./.	./.	./.	./.	./.	1/1:0,13:11:27.08:323,27,0	./.	1/1:2,7:7:18.06:216,18,0	1/1:2,5:5:15.05:180,15,0	./.	1/1:0,11:11:30.05:343,30,0	1/1:8,3:3:9.03:108,9,0	./.	./.
chr10	53371188	.	G	GATA	460.18	PASS	AC=10;AF=0.833;AN=12;BaseQRankSum=1.423;DP=184;FS=10.414;HRun=0;HaplotypeScore=51.3730;MQ=20.25;MQ0=170;MQRankSum=-1.739;QD=28.76;ReadPosRankSum=1.423;VQSLOD=2.6053;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	0/0:8,0:1:2.98:0,3,21	1/1:2,2:2:3.01:74,3,0	./.	./.	./.	./.	./.	1/1:1,1:2:3.01:74,3,0	./.	./.	./.	./.	./.	./.	./.	./.	1/1:2,1:3:9.03:144,9,0	./.	1/1:2,0:1:3.01:34,3,0	./.	./.	1/1:3,2:4:12.04:212,12,0	./.	./.	./.
chr10	53371233	.	C	CA	547.43	PASS	AB=1.000;AC=15;AF=0.938;AN=16;DP=212;FS=0.000;HRun=4;HaplotypeScore=59.9382;MQ=19.59;MQ0=191;QD=15.21;VQSLOD=2.3345;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	1/1:1,1:2:5.89:56,6,0	./.	0/1:12,0:1:0:0,0,0	1/1:1,2:2:5.98:61,6,0	./.	./.	./.	./.	./.	1/1:1,2:2:3.01:41,3,0	./.	./.	./.	./.	./.	./.	./.	./.	1/1:0,3:3:9.03:122,9,0	./.	1/1:2,2:3:8.82:94,9,0	1/1:2,2:3:6.02:81,6,0	./.	1/1:1,4:4:12.04:163,12,0	./.	./.	./.
chr10	53371304	.	TG	T	548.90	PASS	AB=0.769;AC=22;AF=0.846;AN=26;BaseQRankSum=2.249;DP=240;FS=7.055;HRun=1;HaplotypeScore=82.7611;InbreedingCoeff=0.2278;MQ=42.32;MQ0=184;MQRankSum=-3.067;QD=6.24;ReadPosRankSum=2.004;VQSLOD=0.6701;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,1:1:2.92:17,3,0	1/1:0,3:3:8.88:62,9,0	0/0:5,0:2:3.01:0,3,48	0/1:8,0:5:25.60:26,0,79	0/1:1,6:6:0:0,0,0	./.	./.	./.	./.	1/1:3,5:5:14.12:81,14,0	1/1:0,4:4:5.77:31,6,0	./.	./.	./.	./.	./.	./.	./.	./.	1/1:0,3:3:4.12:32,4,0	./.	1/1:4,9:9:23.19:164,23,0	1/1:1,4:4:5.77:31,6,0	./.	1/1:0,6:6:17.57:112,18,0	1/1:6,4:4:11.60:67,12,0	1/1:8,1:1:2.96:19,3,0	./.
chr10	53371313	.	C	CCT	1234.22	PASS	AB=0.769;AC=22;AF=0.846;AN=26;BaseQRankSum=1.879;DP=234;FS=6.947;HRun=0;HaplotypeScore=78.2914;InbreedingCoeff=0.2215;MQ=42.85;MQ0=179;MQRankSum=-3.116;QD=13.56;ReadPosRankSum=2.735;VQSLOD=2.5217;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,1:1:3.01:41,3,0	1/1:0,3:3:9.03:119,9,0	0/0:3,0:2:2.99:0,3,39	0/1:8,0:5:17.02:17,0,126	0/1:1,6:6:0:0,0,0	./.	./.	./.	./.	1/1:4,5:5:15.05:201,15,0	1/1:0,4:4:6.02:79,6,0	./.	./.	./.	./.	./.	./.	./.	./.	1/1:0,3:3:6.02:75,6,0	./.	1/1:4,9:9:24.08:316,24,0	1/1:1,4:4:3.01:40,3,0	./.	1/1:1,6:6:18.06:231,18,0	1/1:8,4:4:12.04:162,12,0	1/1:6,1:1:3.01:43,3,0	./.
chr10	53371471	.	GC	G	4766.95	PASS	AC=50;AF=1.000;AN=50;DP=125;FS=0.000;HRun=1;HaplotypeScore=176.9841;InbreedingCoeff=-0.0498;MQ=28.30;MQ0=6;QD=38.76;VQSLOD=4.1165;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,4:4:9.03:124,9,0	1/1:0,4:4:12.04:165,12,0	./.	./.	1/1:0,4:4:12.04:164,12,0	1/1:1,2:2:6.02:82,6,0	1/1:0,6:6:18.06:247,18,0	1/1:2,1:1:3.01:41,3,0	1/1:0,7:7:21.07:289,21,0	1/1:0,6:7:21.07:282,21,0	./.	1/1:0,7:7:21.07:288,21,0	1/1:0,11:11:30.10:411,30,0	1/1:0,9:9:27.09:371,27,0	1/1:0,4:4:12.04:164,12,0	1/1:0,9:9:27.09:371,27,0	1/1:0,2:3:9.03:116,9,0	1/1:0,2:2:6.02:83,6,0	1/1:0,3:3:9.03:125,9,0	1/1:0,3:3:9.03:124,9,0	1/1:1,2:2:3.01:41,3,0	1/1:0,5:5:15.05:206,15,0	1/1:0,5:5:15.05:206,15,0	1/1:0,2:2:6.02:82,6,0	1/1:0,6:6:18.06:247,18,0	1/1:0,5:5:15.05:208,15,0	1/1:0,7:7:21.07:289,21,0	1/1:0,1:1:3.01:41,3,0
chr10	53371510	.	G	GA	6657.22	PASS	AC=50;AF=1.000;AN=50;DP=195;FS=0.000;HRun=1;HaplotypeScore=211.4223;InbreedingCoeff=-0.0191;MQ=27.66;MQ0=12;QD=36.18;VQSLOD=4.2231;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,13:16:33.11:469,33,0	1/1:1,4:5:15.02:190,15,0	./.	./.	1/1:0,8:8:24.08:340,24,0	1/1:0,2:2:6.02:85,6,0	1/1:2,3:5:14.98:170,15,0	./.	1/1:1,9:10:30.10:423,30,0	1/1:3,8:10:30.10:417,30,0	1/1:0,5:5:15.05:214,15,0	1/1:0,7:7:21.07:298,21,0	1/1:2,9:11:27.07:361,27,0	1/1:2,8:10:30.08:405,30,0	1/1:0,10:8:24.08:341,24,0	1/1:1,9:10:30.08:408,30,0	1/1:1,5:6:18.03:235,18,0	1/1:1,4:5:15.05:212,15,0	1/1:1,5:5:15.05:212,15,0	1/1:0,5:5:15.01:190,15,0	1/1:1,4:5:9.03:127,9,0	1/1:1,8:9:24.08:343,24,0	1/1:4,3:6:17.97:211,18,0	1/1:3,3:6:14.99:172,15,0	1/1:2,5:6:17.99:212,18,0	1/1:1,6:7:21.04:273,21,0	1/1:3,7:10:24.03:304,24,0	1/1:0,1:1:3.01:43,3,0
chr10	53372956	.	CTA	C	1716	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.652;DP=726;FS=0.000;HRun=0;HaplotypeScore=88.9905;InbreedingCoeff=0.9953;MQ=89.11;MQ0=0;MQRankSum=-5.160;QD=38.13;ReadPosRankSum=3.766;VQSLOD=5.5737;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:72.25:0,72,1390	0/0:9,0:9:27.09:0,27,521	0/0:28,0:28:76.80:0,77,1360	0/0:25,0:25:72.22:0,72,1278	0/0:29,0:29:84.29:0,84,1598	0/0:21,0:21:63.22:0,63,1206	0/0:23,0:23:69.22:0,69,1289	0/0:33,0:33:99:0,99,1860	0/0:25,0:25:72.25:0,72,1388	0/0:33,0:33:96.32:0,96,1824	0/0:25,0:25:72.23:0,72,1355	0/0:35,0:35:99:0,105,1957	0/0:31,0:31:90.31:0,90,1716	0/0:26,0:26:78.25:0,78,1474	0/0:37,0:37:99:0,111,2143	0/0:26,0:26:78.27:0,78,1506	1/1:0,22:22:60.20:919,60,0	1/1:0,23:23:60.20:919,60,0	0/0:25,0:25:75.25:0,75,1418	0/0:28,0:28:84.29:0,84,1602	0/0:37,0:37:99:0,111,2052	0/0:26,0:26:75.26:0,75,1444	0/0:26,0:26:78.27:0,78,1488	0/0:21,0:21:63.22:0,63,1202	0/0:17,0:17:51.17:0,51,978	0/0:33,0:33:96.32:0,96,1823	0/0:32,0:32:96.31:0,96,1819	0/0:6,0:6:18.06:0,18,348
chr10	53373626	.	G	GA	769.90	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-7.532;DP=656;FS=0.728;HRun=7;HaplotypeScore=63.0027;InbreedingCoeff=0.9871;MQ=80.99;MQ0=0;MQRankSum=0.259;QD=29.61;ReadPosRankSum=-5.264;VQSLOD=1.7106;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,117,1117	0/0:13,0:13:36.06:0,36,347	0/0:16,0:16:20.65:0,21,255	0/0:20,0:19:40.33:0,40,384	0/0:35,0:35:90.13:0,90,865	0/0:24,0:24:66.11:0,66,637	0/0:17,0:17:42.05:0,42,399	1/1:1,25:26:75.17:865,75,0	0/0:14,0:14:39.04:0,39,366	0/0:20,0:20:54.09:0,54,522	0/0:25,0:25:63.08:0,63,603	0/0:31,0:31:87.13:0,87,835	0/0:22,0:22:60.09:0,60,579	0/0:27,0:27:75.09:0,75,713	0/0:25,0:25:72.10:0,72,690	0/0:25,0:25:72.09:0,72,689	0/0:30,0:30:84.10:0,84,799	0/0:13,0:13:33.04:0,33,319	0/0:25,0:25:60.07:0,60,572	0/0:28,0:28:81.13:0,81,782	0/0:25,0:25:63.08:0,63,604	0/0:23,0:23:63.08:0,63,602	0/0:27,0:27:72.09:0,72,689	0/0:20,0:20:54.08:0,54,521	0/0:23,0:23:66.06:0,66,621	0/0:25,0:25:69.10:0,69,662	0/0:25,0:24:60.09:0,60,579	0/0:8,0:8:17.98:0,18,164
chr10	53373853	.	CCT	C	1379.90	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.170;DP=691;FS=3.050;HRun=0;HaplotypeScore=95.1699;InbreedingCoeff=0.9833;MQ=98.81;MQ0=0;MQRankSum=-3.359;QD=33.66;ReadPosRankSum=2.586;VQSLOD=5.9933;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:99:0,99,1805	0/0:8,0:8:24.08:0,24,442	0/0:41,0:41:93.28:0,93,1505	0/0:34,0:33:78.39:0,78,1254	0/0:31,0:31:93.30:0,93,1658	0/0:27,0:27:81.26:0,81,1422	0/0:28,0:28:81.26:0,81,1473	0/0:36,0:36:99:0,99,1752	0/0:26,0:26:75.26:0,75,1397	0/0:23,0:23:63.22:0,63,1171	0/0:20,0:20:60.21:0,60,1106	0/0:22,0:22:66.23:0,66,1208	0/0:23,0:23:63.22:0,63,1139	0/0:26,0:26:75.26:0,75,1404	0/0:33,0:33:99:0,99,1823	0/0:23,0:23:69.24:0,69,1263	1/1:0,23:23:60.20:883,60,0	1/1:1,17:18:42.14:618,42,0	0/0:15,0:15:45.13:0,45,755	0/0:33,0:33:99:0,99,1797	0/0:30,0:30:87.28:0,87,1544	0/0:22,0:22:63.22:0,63,1137	0/0:19,0:19:54.07:0,54,963	0/0:24,0:24:69.24:0,69,1273	0/0:17,0:17:51.16:0,51,904	0/0:21,0:21:63.22:0,63,1154	0/0:31,0:31:90.31:0,90,1679	0/0:4,0:4:12.04:0,12,189
chr10	53375577	.	A	AGAAG	1769.63	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-3.858;DP=641;FS=3.797;HRun=0;HaplotypeScore=116.9521;InbreedingCoeff=0.8661;MQ=61.90;MQ0=9;MQRankSum=1.902;QD=49.16;ReadPosRankSum=2.563;VQSLOD=4.8077;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:60.09:0,60,967	0/0:10,0:10:30.09:0,30,500	0/0:32,0:18:45.10:0,45,670	0/0:38,0:16:31.93:0,32,403	0/0:37,0:37:99:0,105,1810	0/0:17,0:17:48.12:0,48,759	0/0:19,0:19:54.17:0,54,913	0/0:37,0:37:67.31:0,67,1038	0/0:17,0:17:39.13:0,39,683	0/0:33,0:33:78.25:0,78,1285	0/0:17,0:17:42.14:0,42,690	0/0:25,0:25:69.19:0,69,1119	0/0:23,0:23:60.21:0,60,1044	0/0:21,0:21:45.15:0,45,785	0/0:21,0:21:57.20:0,57,983	0/0:18,0:18:54.19:0,54,946	1/1:5,17:23:45.15:1148,45,0	1/1:3,10:13:0.99:728,1,0	0/0:28,0:27:75.21:0,75,1176	0/0:21,0:21:51.16:0,51,841	0/0:24,0:23:53.84:0,54,893	0/0:19,0:19:57.20:0,57,995	0/0:14,0:14:39.13:0,39,683	0/0:26,0:26:63.10:0,63,985	0/0:30,0:30:90.30:0,90,1548	0/0:21,0:21:54.18:0,54,899	0/0:21,0:21:45.15:0,45,767	0/0:13,0:13:33.05:0,33,479
chr10	53376495	.	AT	A	1231.65	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.860;DP=620;FS=4.704;HRun=6;HaplotypeScore=58.7910;InbreedingCoeff=0.9828;MQ=77.54;MQ0=1;MQRankSum=-2.191;QD=27.99;ReadPosRankSum=1.801;VQSLOD=4.4500;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:81.22:0,81,1021	0/0:18,0:18:51.17:0,51,671	0/0:18,0:16:36.10:0,36,446	0/0:21,0:19:41.06:0,41,495	0/0:21,0:21:57.17:0,57,736	0/0:36,0:36:99:0,105,1352	0/0:15,0:15:45.15:0,45,592	0/0:42,0:42:99:0,108,1382	0/0:16,0:16:42.14:0,42,553	0/0:27,0:27:75.24:0,75,974	0/0:26,0:26:78.15:0,78,975	0/0:15,0:15:39.11:0,39,485	0/0:21,0:21:57.17:0,57,733	0/0:19,0:19:54.17:0,54,697	0/0:22,0:22:63.20:0,63,820	0/0:23,0:23:69.21:0,69,893	1/1:0,28:28:78.20:838,78,0	1/1:0,16:16:48.12:515,48,0	0/0:20,0:20:54.15:0,54,672	0/0:26,0:26:78.24:0,78,1012	0/0:9,0:9:24.06:0,24,299	0/0:24,0:24:66.21:0,66,868	0/0:25,0:25:66.20:0,66,854	0/0:13,0:13:39.13:0,39,513	0/0:32,0:32:96.28:0,96,1222	0/0:26,0:26:75.22:0,75,947	0/0:25,0:26:69.08:0,69,865	0/0:4,0:4:11.93:0,12,135
chr10	53376722	.	ACTCT	A	175.11	PASS	AB=0.929;AC=11;AF=0.250;AN=44;BaseQRankSum=0.209;DP=665;FS=16.910;HRun=0;HaplotypeScore=101.9995;InbreedingCoeff=0.1811;MQ=58.05;MQ0=64;MQRankSum=-0.515;QD=1.44;ReadPosRankSum=1.294;VQSLOD=0.7056;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:21,0:20:1.20:1,0,28	./.	./.	./.	./.	0/0:19,0:19:3.01:0,3,36	0/0:19,0:19:3.01:0,3,50	0/0:33,0:33:10.19:0,10,68	1/1:21,0:20:0.47:1,0,0	0/0:24,0:24:5.59:0,6,59	./.	0/1:14,0:15:22.31:22,0,64	1/1:14,1:15:1.19:43,1,0	0/0:23,0:24:5.85:0,6,95	0/1:14,3:17:13.93:14,0,64	1/1:13,1:14:9.83:141,10,0	0/0:14,0:13:2.99:0,3,24	0/0:11,0:11:1.12:0,1,73	0/0:12,0:12:9.01:0,9,95	0/0:18,0:18:0:0,0,0	0/0:17,0:17:6.49:0,6,106	0/0:18,0:20:5.61:0,6,70	0/0:21,0:22:2.70:0,3,21	1/1:13,5:18:5.98:66,6,0	0/0:18,0:18:3.01:0,3,30	0/0:24,0:23:2.54:0,3,12	0/0:18,0:18:2.74:0,3,21	./.
chr10	53377289	.	C	CAGACCAAATACAAGTGG	1945.99	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-0.864;DP=633;FS=0.000;HRun=0;HaplotypeScore=277.7359;InbreedingCoeff=0.8914;MQ=91.65;MQ0=0;MQRankSum=-5.136;QD=84.61;ReadPosRankSum=1.968;VQSLOD=2.6430;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,105,4901	0/0:8,0:8:24.05:0,24,1025	0/0:22,0:22:59.94:0,60,2124	0/0:31,0:31:87.26:0,87,3042	0/0:29,0:29:81.27:0,81,3556	0/0:18,0:18:48.16:0,48,2051	0/0:20,0:20:60.21:0,60,2982	0/0:25,0:25:69.22:0,69,2771	0/0:21,0:21:63.21:0,63,2683	0/0:34,0:34:99:0,102,4726	0/0:28,0:28:84.29:0,84,3764	0/0:26,0:26:75.26:0,75,3197	0/0:31,0:31:93.32:0,93,4308	0/0:22,0:22:63.22:0,63,2935	0/0:25,0:25:75.26:0,75,3494	0/0:17,0:17:48.16:0,48,2232	1/1:3,2:12:15.05:1049,15,0	1/1:4,2:11:12.04:1009,12,0	0/0:20,0:20:60.21:0,60,2777	0/0:28,0:28:81.28:0,81,3610	0/0:19,0:19:57.18:0,57,2413	0/0:21,0:21:60.19:0,60,2413	0/0:22,0:22:63.22:0,63,2679	0/0:15,0:15:45.15:0,45,2077	0/0:25,0:25:75.26:0,75,3413	0/0:30,0:30:87.30:0,87,4246	0/0:35,0:35:99:0,105,4483	0/0:1,0:1:3.01:0,3,151
chr10	53378853	.	G	GC	2344.16	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.855;DP=389;FS=8.337;HRun=1;HaplotypeScore=52.2192;InbreedingCoeff=0.6514;MQ=84.70;MQ0=0;MQRankSum=-0.917;QD=40.42;ReadPosRankSum=4.667;VQSLOD=3.7717;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:38.96:0,39,419	0/0:5,0:5:14.97:0,15,157	0/0:13,0:13:32.78:0,33,343	0/0:12,0:12:20.68:0,21,209	0/0:2,0:2:2.97:0,3,20	0/0:11,0:11:17.03:0,17,169	0/0:22,0:22:59.99:0,60,688	0/0:18,0:18:32.88:0,33,346	0/0:17,0:17:48.16:0,48,622	0/0:7,0:7:4.94:0,5,100	0/0:4,0:4:6.01:0,6,78	0/0:26,0:26:72.05:0,72,894	0/0:18,0:18:51.10:0,51,629	0/0:28,0:28:72.14:0,72,869	0/0:14,0:14:42.11:0,42,516	0/0:10,0:10:30.10:0,30,389	1/1:1,23:24:69.23:1033,69,0	1/1:2,32:34:96.32:1431,96,0	0/0:8,0:8:21.06:0,21,259	0/0:4,0:4:6.02:0,6,78	0/0:25,0:24:55.92:0,56,610	0/0:3,0:3:6.02:0,6,78	0/0:2,0:2:2.76:0,3,38	0/0:34,0:34:96.29:0,96,1229	0/0:5,0:5:9.02:0,9,102	0/0:7,0:7:8.92:0,9,77	0/0:8,0:8:24.06:0,24,288	0/0:10,0:10:27.09:0,27,350
chr10	53379022	.	CT	C	4635.20	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=12.370;DP=692;FS=3.698;HRun=10;HaplotypeScore=68.6724;InbreedingCoeff=0.9486;MQ=72.06;MQ0=0;MQRankSum=-2.585;QD=21.17;ReadPosRankSum=2.358;VQSLOD=5.9962;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:84.20:0,84,912	0/0:19,0:19:51.10:0,51,551	0/0:23,0:22:38.77:0,39,420	0/0:17,0:17:29.97:0,30,390	0/0:39,1:40:85.08:0,85,1150	0/0:19,0:19:45.08:0,45,484	0/0:16,2:19:1.87:0,2,460	0/0:24,0:24:66.17:0,66,723	0/0:31,1:32:58.17:0,58,861	1/1:4,21:25:49.20:530,49,0	1/1:3,24:27:71.98:625,72,0	0/0:28,0:28:72.19:0,72,796	0/0:32,0:32:67.77:0,68,935	0/0:24,1:25:40.11:0,40,663	0/0:27,0:28:75.02:0,75,803	0/0:25,1:26:46.14:0,46,737	1/1:3,26:29:39.03:566,39,0	1/1:1,17:19:47.03:397,47,0	1/1:3,23:26:68.97:596,69,0	1/1:0,31:31:92.98:807,93,0	1/1:1,7:8:15:130,15,0	0/0:23,0:24:47.94:0,48,497	0/0:33,0:33:90.24:0,90,994	0/0:26,2:28:29.10:0,29,770	0/0:23,2:25:17.05:0,17,628	1/1:4,21:26:64.99:548,65,0	1/1:7,19:26:17.82:384,18,0	1/1:0,2:2:6:52,6,0
chr10	53381081	.	T	TTATATATATATATATATATA	1760.54	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=4.005;DP=551;FS=0.000;HRun=0;HaplotypeScore=275.6901;InbreedingCoeff=0.9407;MQ=66.45;MQ0=0;MQRankSum=-4.640;QD=73.36;ReadPosRankSum=0.025;VQSLOD=2.7290;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,119,5671	0/0:13,0:13:30.10:0,30,1384	0/0:14,0:13:12.82:0,13,209	0/0:11,0:9:15.45:0,15,315	0/0:19,0:19:48.16:0,48,2025	0/0:18,0:18:45.14:0,45,2230	0/0:20,0:20:42.13:0,42,1746	0/0:37,0:37:93.29:0,93,3348	0/0:18,0:18:45.15:0,45,1924	0/0:30,0:30:72.72:0,73,3038	0/0:22,0:22:60.20:0,60,2732	0/0:16,0:16:36.11:0,36,1643	0/0:18,0:18:45.14:0,45,2240	0/0:18,0:18:48.16:0,48,2458	0/0:22,0:22:54.19:0,54,2620	0/0:24,0:24:63.20:0,63,2800	1/1:6,4:12:12.04:861,12,0	1/1:9,0:12:15.05:1012,15,0	0/0:25,0:25:54.18:0,54,2312	0/0:28,0:28:69.23:0,69,3278	0/0:8,0:8:15.04:0,15,513	0/0:12,0:12:21.07:0,21,906	0/0:26,0:26:69.23:0,69,2969	0/0:17,0:17:33.07:0,33,1214	0/0:22,0:22:63.21:0,63,2954	0/0:14,0:14:33.11:0,33,1445	0/0:19,0:18:42.14:0,42,1962	0/0:6,0:6:18.06:0,18,790
chr10	53383145	.	T	TG	1304.83	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=3.407;DP=711;FS=9.634;HRun=1;HaplotypeScore=67.4086;InbreedingCoeff=0.9997;MQ=85.07;MQ0=2;MQRankSum=-2.094;QD=33.46;ReadPosRankSum=-0.776;VQSLOD=2.3114;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,135,1737	0/0:17,0:17:48.16:0,48,623	0/0:26,0:26:69.19:0,69,870	0/0:19,0:19:54.09:0,54,635	0/0:40,0:40:99:0,117,1491	0/0:29,0:29:81.22:0,81,1032	0/0:19,0:19:54.16:0,54,687	0/0:31,0:31:81.22:0,81,997	0/0:29,0:29:81.23:0,81,1010	0/0:40,0:40:99:0,117,1485	0/0:25,0:25:75.23:0,75,958	0/0:14,0:14:42.12:0,42,519	0/0:27,0:27:81.23:0,81,1021	0/0:25,0:25:75.24:0,75,973	0/0:23,0:23:69.19:0,69,854	0/0:18,0:18:54.16:0,54,684	1/1:2,24:26:63.21:943,63,0	1/1:0,13:13:35.97:483,36,0	0/0:28,0:28:84.26:0,84,1073	0/0:37,0:37:99:0,111,1414	0/0:16,0:14:36.12:0,36,466	0/0:19,0:19:48.08:0,48,590	0/0:27,0:27:75.21:0,75,935	0/0:18,0:18:51.15:0,51,647	0/0:29,0:29:81.26:0,81,1038	0/0:26,0:26:78.25:0,78,1013	0/0:33,0:33:96.30:0,96,1233	0/0:11,0:11:33.11:0,33,423
chr10	53383253	.	GT	G	1070.26	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.194;DP=696;FS=6.567;HRun=2;HaplotypeScore=66.3759;InbreedingCoeff=0.8658;MQ=79.59;MQ0=0;MQRankSum=-2.420;QD=33.45;ReadPosRankSum=2.155;VQSLOD=3.7148;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,105,1530	0/0:3,0:3:9.03:0,9,135	0/0:23,0:23:66.16:0,66,928	0/0:15,0:15:0.89:0,1,412	0/0:40,0:39:99:0,117,1732	0/0:16,0:16:48.15:0,48,693	0/0:19,0:19:57.18:0,57,835	0/0:30,0:30:87.27:0,87,1252	0/0:30,0:30:90.26:0,90,1283	0/0:35,0:35:99:0,99,1467	0/0:17,0:16:42.11:0,42,573	0/0:18,0:18:51.15:0,51,724	0/0:23,0:23:66.22:0,66,981	0/0:32,0:32:96.32:0,96,1432	0/0:26,0:26:78.25:0,78,1138	0/0:24,0:24:72.22:0,72,1041	1/1:0,23:23:69.22:856,69,0	1/1:0,9:9:27.08:335,27,0	0/0:32,0:32:84.28:0,84,1258	0/0:27,0:25:66.18:0,66,964	0/0:21,0:21:60.19:0,60,878	0/0:40,0:40:99:0,120,1754	0/0:27,0:27:81.26:0,81,1194	0/0:25,0:25:75.24:0,75,1105	0/0:26,0:25:69.22:0,69,1011	0/0:28,0:28:84.28:0,84,1258	0/0:31,0:31:90.30:0,90,1346	0/0:17,0:17:45.15:0,45,665
chr10	53383617	.	T	TC	1699.74	PASS	AC=42;AF=1.000;AN=42;DP=127;FS=0.000;HRun=1;HaplotypeScore=26.9254;InbreedingCoeff=-0.1120;MQ=40.22;MQ0=2;QD=15.59;VQSLOD=3.0107;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,13:12:12.04:161,12,0	1/1:1,0:1:3.01:44,3,0	./.	./.	1/1:0,7:5:3.01:34,3,0	1/1:0,9:8:8.86:101,9,0	1/1:1,3:3:3.01:36,3,0	1/1:1,4:3:8.61:63,9,0	1/1:0,3:3:6.02:86,6,0	1/1:0,5:5:15.04:184,15,0	./.	1/1:1,5:6:9.03:125,9,0	1/1:0,2:1:3.01:43,3,0	./.	1/1:0,5:4:6.02:82,6,0	1/1:0,3:3:3.01:43,3,0	./.	./.	1/1:1,5:6:15.04:186,15,0	1/1:0,9:7:3.01:43,3,0	./.	1/1:0,2:1:3.01:43,3,0	1/1:1,4:5:6.02:85,6,0	1/1:0,6:5:6.02:87,6,0	1/1:0,4:3:3.01:43,3,0	1/1:0,9:8:18.05:229,18,0	1/1:0,2:2:3.01:41,3,0	1/1:0,3:3:2.84:14,3,0
chr10	53389320	.	A	AG	921.94	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.516;DP=745;FS=2.759;HRun=1;HaplotypeScore=78.4925;InbreedingCoeff=0.9389;MQ=82.44;MQ0=0;MQRankSum=0.679;QD=40.08;ReadPosRankSum=0.012;VQSLOD=4.1392;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,103,1304	0/0:9,0:9:27.06:0,27,333	0/0:22,0:22:54.17:0,54,694	0/0:26,0:26:78.22:0,78,982	0/0:35,0:35:99:0,99,1226	0/0:24,0:24:66.16:0,66,824	0/0:21,0:21:63.19:0,63,803	0/0:37,0:37:99:0,105,1350	0/0:24,0:24:69.21:0,69,880	0/0:39,0:39:99:0,114,1456	0/0:33,0:33:90.22:0,90,1132	0/0:24,0:24:72.17:0,72,899	0/0:31,0:31:93.22:0,93,1154	0/0:28,0:28:78.25:0,78,1009	0/0:46,0:46:99:0,138,1724	0/0:32,0:32:93.30:0,93,1206	1/1:0,21:21:63.21:944,63,0	1/1:0,2:2:6.02:90,6,0	0/0:23,0:23:63.20:0,63,818	0/0:34,0:34:99:0,99,1270	0/0:34,0:34:96.31:0,96,1246	0/0:27,0:27:69.19:0,69,877	0/0:28,0:28:84.21:0,84,1054	0/0:19,0:19:57.19:0,57,740	0/0:28,0:28:81.17:0,81,986	0/0:24,0:24:69.21:0,69,872	0/0:31,0:31:90.20:0,90,1080	0/0:6,0:6:18.06:0,18,234
chr10	53390790	.	GA	G	8182.81	PASS	AB=1.000;AC=35;AF=0.625;AN=56;BaseQRankSum=13.140;DP=584;FS=11.348;HRun=9;HaplotypeScore=58.3565;InbreedingCoeff=0.8981;MQ=74.00;MQ0=0;MQRankSum=-3.343;QD=21.53;ReadPosRankSum=2.679;VQSLOD=5.1871;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:48.14:0,48,554	0/0:10,1:11:2.61:0,3,276	0/1:14,0:14:3.41:3,0,185	0/0:8,0:8:12.02:0,12,128	1/1:3,27:30:75.03:686,75,0	1/1:1,26:27:69.04:632,69,0	1/1:1,13:14:39.02:357,39,0	1/1:4,25:29:75:679,75,0	1/1:0,16:16:45.02:412,45,0	1/1:6,23:29:69.03:632,69,0	1/1:2,18:20:48.02:439,48,0	0/0:21,0:21:57.15:0,57,640	0/0:21,0:21:57.16:0,57,648	1/1:2,12:14:33.02:302,33,0	0/0:21,0:21:63.17:0,63,716	0/0:21,1:22:29.70:0,30,596	1/1:0,20:20:54.03:494,54,0	1/1:2,14:17:35.05:308,35,0	1/1:7,18:25:54.02:494,54,0	1/1:6,26:32:74.15:685,74,0	1/1:5,15:20:39.02:357,39,0	0/0:24,2:26:14.27:0,14,672	0/0:27,0:27:66.20:0,66,762	0/0:28,0:28:69.18:0,69,777	1/1:3,18:21:48.02:439,48,0	1/1:4,11:15:33.01:302,33,0	1/1:2,33:35:99:906,99,0	1/1:0,2:2:6:55,6,0
chr10	53393897	.	ACACACACACACGCACACGCACACG	A	8339	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=12.878;DP=743;FS=2.610;HRun=0;HaplotypeScore=454.7917;InbreedingCoeff=0.9690;MQ=59.37;MQ0=2;MQRankSum=-6.905;QD=53.11;ReadPosRankSum=-0.692;VQSLOD=2.2075;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,115,10362	0/0:10,0:10:27.06:0,27,2245	0/0:38,0:30:44.99:0,45,1913	0/0:29,0:21:50.04:0,50,1636	0/0:31,0:31:44.17:0,44,4748	0/0:21,0:21:57.18:0,57,4583	0/0:22,0:22:45.03:0,45,2813	0/0:39,0:39:96.23:0,96,4993	0/0:33,0:33:72.23:0,72,5891	1/1:5,21:26:50.69:1663,51,0	1/1:3,17:20:12.04:575,12,0	0/0:32,0:32:90.28:0,90,7272	0/0:25,0:25:54.15:0,54,4528	0/0:36,0:36:69.22:0,69,5715	0/0:35,0:35:75.15:0,75,5425	0/0:23,0:23:66.20:0,66,5802	0/0:37,0:37:90.31:0,90,9172	0/0:19,0:19:7.10:0,7,2587	1/1:3,11:14:29.86:467,30,0	1/1:5,15:20:21.07:1248,21,0	1/1:28,0:28:20.28:356,20,0	0/0:30,0:30:81.19:0,81,6360	0/0:23,0:23:54.17:0,54,4465	0/0:36,0:36:75.80:0,76,8474	0/0:19,0:18:42.10:0,42,3191	1/1:2,18:20:47.89:1425,48,0	1/1:4,20:24:33.11:2052,33,0	1/1:1,4:5:9.03:554,9,0
chr10	53393921	.	G	GCA	4343.89	PASS	AB=0.821;AC=19;AF=0.339;AN=56;BaseQRankSum=0.400;DP=769;FS=2.325;HRun=0;HaplotypeScore=187.8281;InbreedingCoeff=0.3699;MQ=58.69;MQ0=3;MQRankSum=-1.585;QD=13.79;ReadPosRankSum=-2.148;VQSLOD=4.4402;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:54:99:0,107,1330	0/0:11,0:13:35.43:0,35,352	0/0:31,0:18:15.93:0,16,183	0/0:33,0:24:28.89:0,29,322	0/1:10,24:34:25.06:627,0,25	1/1:5,18:23:27.44:750,27,0	0/1:7,13:20:0.47:451,0,0	0/0:34,0:34:62.92:0,63,699	1/1:8,30:39:15.71:917,16,0	0/1:29,0:29:23.82:24,0,42	1/1:20,0:20:0.94:3,1,0	0/0:32,0:33:72:0,72,838	0/0:20,0:23:56.77:0,57,616	1/1:7,28:36:5.14:906,5,0	0/0:25,0:26:59.95:0,60,675	0/0:25,0:26:65.95:0,66,744	0/0:44,0:45:99:0,119,1379	0/0:19,0:19:2.86:0,3,330	0/1:16,0:16:6.06:6,0,9	0/1:25,0:25:1.88:2,0,11	1/1:19,0:19:1.93:6,2,0	0/0:31,0:33:80.83:0,81,900	0/0:19,0:20:38.95:0,39,451	0/0:34,0:35:99:0,99,1159	0/1:4,18:23:35.71:626,0,36	0/1:25,0:25:19.88:20,0,53	0/0:25,0:25:13.20:0,13,85	1/1:5,0:5:2.19:6,2,0
chr10	53394921	.	GCACACA	G	1610.98	PASS	AC=12;AF=0.231;AN=52;BaseQRankSum=3.435;DP=499;FS=0.757;HRun=0;HaplotypeScore=108.6626;InbreedingCoeff=0.8742;MQ=57.76;MQ0=14;MQRankSum=-6.926;QD=14.13;ReadPosRankSum=-0.122;VQSLOD=2.8051;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,1:46:62.68:0,63,1430	0/0:9,0:9:18.06:0,18,375	./.	./.	1/1:14,14:27:18.06:367,18,0	1/1:8,10:18:15.02:306,15,0	1/1:12,2:16:17.99:314,18,0	0/0:15,0:15:3.01:0,3,93	1/1:5,10:16:12.04:226,12,0	0/0:19,0:18:30.09:0,30,721	0/0:12,0:12:12:0,12,168	0/0:18,0:18:45.14:0,45,1231	0/0:9,0:12:21.07:0,21,505	1/1:10,6:17:15.05:268,15,0	0/0:12,0:12:21.07:0,21,538	0/0:19,0:19:30.10:0,30,631	0/0:25,0:24:40.01:0,40,957	0/0:20,0:20:33.55:0,34,762	0/0:7,0:8:12.04:0,12,286	0/0:10,0:20:16.79:0,17,372	0/0:17,0:22:6.02:0,6,150	0/0:13,0:13:21.07:0,21,546	0/0:11,0:12:18.06:0,18,422	0/0:21,0:21:36.11:0,36,941	1/1:8,9:17:15.05:306,15,0	0/0:24,0:24:36.11:0,36,926	0/0:12,0:20:12.04:0,12,314	0/0:4,0:4:4.77:0,5,24
chr10	53395196	.	CA	C	1430.51	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.235;DP=770;FS=1.321;HRun=1;HaplotypeScore=73.0682;InbreedingCoeff=0.9997;MQ=82.12;MQ0=0;MQRankSum=-4.582;QD=33.27;ReadPosRankSum=0.026;VQSLOD=3.2614;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:81.28:0,81,1295	0/0:12,0:12:36.12:0,36,575	0/0:28,0:28:84.29:0,84,1341	0/0:27,0:27:76.90:0,77,1084	0/0:34,0:34:99:0,102,1627	0/0:30,0:30:90.31:0,90,1439	0/0:18,0:18:54.17:0,54,837	0/0:40,0:40:99:0,117,1849	0/0:38,0:38:99:0,114,1777	0/0:31,0:31:93.32:0,93,1487	0/0:11,0:11:33.11:0,33,528	0/0:28,0:28:84.29:0,84,1343	0/0:29,0:29:84.27:0,84,1312	0/0:31,0:31:93.32:0,93,1481	0/0:26,0:26:78.27:0,78,1240	0/0:33,0:33:99:0,99,1558	1/1:0,26:26:63.21:881,63,0	1/1:0,17:17:48.16:671,48,0	0/0:29,0:29:87.28:0,87,1344	0/0:37,0:37:99:0,111,1774	0/0:34,0:34:99:0,102,1631	0/0:26,0:26:78.27:0,78,1245	0/0:23,0:23:66.21:0,66,1031	0/0:25,0:25:75.26:0,75,1199	0/0:22,0:22:63.21:0,63,1007	0/0:38,0:38:99:0,114,1818	0/0:37,0:37:99:0,111,1726	0/0:12,0:12:36.12:0,36,571
chr10	53398078	.	TCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTC	T	4505.24	PASS	AB=1.000;AC=28;AF=0.538;AN=52;BaseQRankSum=2.151;DP=481;FS=4.768;HRun=0;HaplotypeScore=225.0814;InbreedingCoeff=0.5087;MQ=28.01;MQ0=175;MQRankSum=-4.802;QD=16.81;ReadPosRankSum=0.612;VQSLOD=3.6376;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:19:42.11:0,42,1056	0/1:8,0:6:24.61:25,0,191	./.	./.	1/1:7,0:21:7.69:77,8,0	1/1:24,0:19:37.55:693,38,0	1/1:10,0:5:10.23:112,10,0	0/0:27,0:12:3.17:0,3,31	1/1:11,0:10:21.02:386,21,0	1/1:15,0:10:14.50:339,14,0	0/0:8,0:4:3.01:0,3,70	0/0:13,0:7:14.51:0,15,220	0/0:12,0:5:15.05:0,15,314	1/1:11,0:5:8.92:145,9,0	0/0:32,0:25:23.20:0,23,1323	0/0:16,0:10:24.08:0,24,654	0/1:23,0:10:99:189,0,114	1/1:13,0:2:3.01:130,3,0	1/1:1,12:13:36.04:925,36,0	1/1:16,0:14:17.16:353,17,0	0/1:20,0:9:46.91:47,0,181	0/0:17,0:10:22.39:0,22,529	0/0:13,0:5:9.03:0,9,165	0/0:38,0:20:35.44:0,35,1058	0/1:25,0:19:94.77:350,0,95	1/1:12,9:11:3.35:497,3,0	1/1:19,0:10:5.80:110,6,0	1/1:13,0:7:4.52:129,5,0
chr10	53398090	.	TCTC	T	1061.06	PASS	AB=0.984;AC=19;AF=0.380;AN=50;BaseQRankSum=8.175;DP=432;FS=9.418;HRun=0;HaplotypeScore=80.6681;InbreedingCoeff=0.2216;MQ=30.46;MQ0=142;MQRankSum=-4.220;QD=4.94;ReadPosRankSum=0.123;VQSLOD=0.6063;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:18:44.74:0,45,431	0/0:6,0:5:5.97:0,6,87	./.	./.	./.	1/1:16,5:18:26.34:305,26,0	1/1:10,1:6:12.36:123,12,0	0/0:15,0:4:9.02:0,9,110	1/1:7,4:10:20.88:231,21,0	0/1:12,0:8:4:51,0,4	0/0:7,0:4:5.77:0,6,40	0/0:13,0:8:18.04:0,18,233	0/0:12,0:7:20.99:0,21,238	1/1:13,1:8:9.38:79,9,0	0/0:26,0:22:53.29:0,53,457	0/0:16,0:10:26.78:0,27,307	0/1:21,0:9:48.69:49,0,67	1/1:11,0:2:2.98:21,3,0	0/1:13,0:13:14.05:31,0,14	0/1:15,0:14:25.12:71,0,25	0/1:17,0:8:28.59:29,0,59	0/0:18,0:12:35.80:0,36,360	0/0:12,0:7:18.06:0,18,257	0/0:38,0:21:28.15:0,28,568	0/1:19,4:17:40.96:194,0,41	0/1:15,0:9:4.48:23,0,4	0/1:19,0:10:13.52:14,0,21	0/1:11,0:7:9.45:9,0,12
chr10	53398096	.	TCTC	T	1146.13	PASS	AB=0.967;AC=26;AF=0.520;AN=50;BaseQRankSum=9.716;DP=401;FS=7.302;HRun=0;HaplotypeScore=81.0905;InbreedingCoeff=0.5238;MQ=32.94;MQ0=119;MQRankSum=-4.219;QD=5.97;ReadPosRankSum=-0.564;VQSLOD=1.1701;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:19:50.65:0,51,507	0/0:6,0:5:6:0,6,87	./.	./.	./.	1/1:15,0:12:26.53:190,27,0	1/1:9,0:5:3.43:41,3,0	0/0:12,0:4:8.28:0,8,60	1/1:10,0:9:14.18:128,14,0	1/1:11,0:8:12.79:90,13,0	0/1:9,0:7:18.99:19,0,19	0/0:13,0:10:22.85:0,23,250	0/0:14,0:9:26.99:0,27,291	1/1:15,0:9:18.20:122,18,0	0/0:27,0:23:53.37:0,53,490	0/0:15,0:10:26.78:0,27,296	0/1:20,0:10:24.26:24,0,58	1/1:9,0:1:2.98:21,3,0	1/1:12,0:12:15.43:168,15,0	1/1:7,6:12:6.78:128,7,0	0/1:11,2:6:40.62:41,0,93	0/0:19,0:14:41.81:0,42,446	0/0:12,0:7:18.06:0,18,258	0/0:38,0:22:41.81:0,42,605	0/1:18,0:12:42.18:114,0,42	1/1:12,0:9:14.97:156,15,0	1/1:13,2:8:3.01:37,3,0	1/1:10,1:7:3.47:52,3,0
chr10	53399125	.	G	GA	690.44	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-7.588;DP=582;FS=5.288;HRun=8;HaplotypeScore=56.3017;InbreedingCoeff=0.9747;MQ=81.53;MQ0=0;MQRankSum=-2.603;QD=22.27;ReadPosRankSum=-4.357;VQSLOD=2.2419;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:78.04:0,78,714	0/0:6,0:6:18.01:0,18,165	0/0:17,0:16:20.37:0,20,339	0/0:17,0:17:41.77:0,42,357	0/0:27,0:27:78.02:0,78,707	0/0:17,0:17:48.02:0,48,439	0/0:20,0:20:60.03:0,60,549	1/1:7,24:31:69.18:785,69,0	0/0:19,0:19:51.01:0,51,461	0/0:23,0:24:62.05:0,62,555	0/0:31,0:31:69.03:0,69,631	0/0:19,0:19:54.03:0,54,494	0/0:23,0:23:56.98:0,57,514	0/0:19,0:19:51.03:0,51,467	0/0:16,0:16:42.02:0,42,384	0/0:22,0:22:57.03:0,57,522	0/0:29,0:29:84.05:0,84,768	0/0:11,0:11:20.54:0,21,191	0/0:17,0:17:48.02:0,48,439	0/0:33,0:33:86.97:0,87,786	0/0:13,0:13:36.02:0,36,330	0/0:19,0:19:54.03:0,54,494	0/0:20,0:21:53.05:0,53,469	0/0:8,0:8:17.90:0,18,143	0/0:24,0:24:59.96:0,60,537	0/0:29,0:29:84.02:0,84,761	0/0:28,0:28:78.03:0,78,709	0/0:16,0:16:42.02:0,42,384
chr10	53401079	.	CT	C	551.84	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=1.752;DP=554;FS=5.449;HRun=8;HaplotypeScore=66.0755;InbreedingCoeff=0.9387;MQ=83.58;MQ0=0;MQRankSum=0.008;QD=18.39;ReadPosRankSum=-4.209;VQSLOD=2.5383;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:66.20:0,66,797	0/0:5,0:5:9.03:0,9,109	0/0:23,0:23:54.12:0,54,628	0/0:13,0:13:26.86:0,27,281	0/0:22,0:22:66.20:0,66,797	0/0:20,0:20:57.16:0,57,677	0/0:19,0:19:51.16:0,51,615	1/1:7,23:30:69.04:647,69,0	0/0:17,0:17:42.07:0,42,495	0/0:29,0:29:81.22:0,81,949	0/0:14,0:14:39.12:0,39,471	0/0:13,0:13:33.10:0,33,398	0/0:24,0:24:63.18:0,63,750	0/0:9,0:9:21.06:0,21,254	0/0:22,0:22:60.16:0,60,703	0/0:19,0:19:57.15:0,57,666	0/0:26,0:26:63.19:0,63,761	0/0:15,0:15:36.11:0,36,435	0/0:20,0:20:57.17:0,57,689	0/0:31,0:31:75.20:0,75,882	0/0:10,0:10:27.08:0,27,326	0/0:22,0:22:60.14:0,60,699	0/0:28,0:28:81.25:0,81,978	0/0:13,0:13:33.09:0,33,387	0/0:27,0:27:66.20:0,66,789	0/0:18,0:18:54.16:0,54,642	0/0:31,0:31:84.24:0,84,994	0/0:10,0:10:30.09:0,30,362
chr10	53401557	.	GGA	G	3881.14	PASS	AB=0.842;AC=35;AF=0.625;AN=56;BaseQRankSum=4.251;DP=473;FS=13.544;HRun=0;HaplotypeScore=79.9846;InbreedingCoeff=0.6465;MQ=56.69;MQ0=24;MQRankSum=2.460;QD=12.40;ReadPosRankSum=-0.282;VQSLOD=2.4179;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:60.59:0,61,882	0/0:7,0:7:12.04:0,12,196	0/1:31,0:10:10.52:11,0,116	0/0:38,0:13:24.85:0,25,186	1/1:24,0:29:35.79:172,36,0	1/1:12,0:14:17:83,17,0	1/1:10,0:9:15.82:74,16,0	1/1:11,13:22:54.63:658,55,0	1/1:5,0:5:6.24:29,6,0	0/1:9,12:21:10.35:353,0,10	1/1:20,3:22:40.72:432,41,0	0/0:13,0:13:30.10:0,30,488	0/0:11,0:10:27.09:0,27,410	1/1:13,0:13:15.78:74,16,0	0/0:10,0:10:15.05:0,15,236	0/0:15,0:14:36.12:0,36,567	1/1:8,3:10:0.52:167,1,0	1/1:6,1:6:3.01:37,3,0	1/1:3,5:7:8.94:110,9,0	1/1:1,13:14:30.09:369,30,0	1/1:9,6:12:2.31:36,2,0	0/1:7,1:8:15.82:16,0,261	0/0:13,0:13:15.04:0,15,205	0/0:23,0:20:39.13:0,39,633	1/1:11,0:19:30.68:147,31,0	1/1:7,18:23:51.16:627,51,0	1/1:7,13:19:4.57:306,5,0	1/1:11,0:10:15.04:180,15,0
chr10	53401627	.	ATGAT	A	2549.69	PASS	AB=1.000;AC=14;AF=0.250;AN=56;BaseQRankSum=10.541;DP=523;FS=0.000;HRun=0;HaplotypeScore=111.1266;InbreedingCoeff=0.4625;MQ=59.29;MQ0=2;MQRankSum=-1.948;QD=15.00;ReadPosRankSum=1.233;VQSLOD=3.1655;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,117,2459	0/0:6,0:6:18.04:0,18,423	0/1:9,0:5:0.63:1,0,52	0/0:7,0:5:12.04:0,12,220	0/1:36,0:36:99:317,0,157	0/1:14,0:14:98.92:177,0,99	0/1:12,0:12:4.01:133,0,4	1/1:3,29:32:84.04:985,84,0	1/1:5,0:5:11.98:101,12,0	0/0:30,0:30:87.28:0,87,2117	0/0:27,0:28:75.81:0,76,1630	0/0:15,0:15:45.12:0,45,1025	0/0:21,0:21:60.19:0,60,1460	1/1:14,0:14:9.02:237,9,0	0/0:17,0:17:51.14:0,51,1233	0/0:15,0:15:42.12:0,42,986	0/1:12,0:12:14.01:200,0,14	1/1:9,0:9:2.98:158,3,0	0/0:16,0:16:42.11:0,42,894	0/0:28,0:28:63.14:0,63,1457	0/0:16,0:16:45.14:0,45,1095	0/0:13,0:13:39.12:0,39,951	0/0:17,0:17:51.13:0,51,1293	0/0:11,0:11:26.82:0,27,543	0/1:27,0:27:4.94:407,0,5	0/0:25,0:25:66.18:0,66,1538	0/0:34,0:34:90.22:0,90,1986	0/0:11,0:11:30.10:0,30,798
chr10	53401632	.	TGATA	T	4128.07	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=12.175;DP=538;FS=6.516;HRun=0;HaplotypeScore=105.9706;InbreedingCoeff=0.8693;MQ=59.77;MQ0=2;MQRankSum=-2.120;QD=25.02;ReadPosRankSum=0.515;VQSLOD=3.1993;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:44:93.30:0,93,2125	0/0:6,0:6:15.05:0,15,370	0/0:12,0:6:6:0,6,78	0/0:9,0:4:6.49:0,6,144	1/1:7,31:38:53.83:834,54,0	1/1:7,7:14:24.08:399,24,0	1/1:1,12:13:18.06:300,18,0	0/1:31,0:31:10.92:282,0,11	1/1:0,5:5:12.04:200,12,0	0/0:32,0:32:84.28:0,84,1973	0/0:28,0:28:57.89:0,58,1376	0/0:15,0:15:36.12:0,36,887	0/0:25,0:25:69.17:0,69,1549	1/1:1,13:14:30.03:467,30,0	0/0:17,0:17:45.15:0,45,1057	0/0:15,0:15:39.13:0,39,908	1/1:2,12:14:27.09:449,27,0	1/1:4,7:11:8.07:328,8,0	0/0:14,0:14:33.11:0,33,785	0/0:27,0:27:60.07:0,60,1342	0/0:15,0:15:42.14:0,42,1035	0/0:13,0:13:36.11:0,36,838	0/0:17,0:17:48.16:0,48,1180	0/0:13,0:13:24.08:0,24,574	1/1:2,23:25:54.14:869,54,0	0/0:24,0:24:66.19:0,66,1437	0/0:34,0:34:78.24:0,78,1827	0/0:12,0:12:30.10:0,30,732
chr10	53401805	.	T	TGATA	11570.92	PASS	AB=0.777;AC=34;AF=0.630;AN=54;BaseQRankSum=-6.617;DP=703;FS=5.069;HRun=0;HaplotypeScore=183.5940;InbreedingCoeff=0.3020;MQ=52.96;MQ0=2;MQRankSum=0.781;QD=19.98;ReadPosRankSum=2.419;VQSLOD=4.3194;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:27:3.87:4,0,495	0/0:9,0:9:24.07:0,24,342	0/0:19,0:16:3.01:0,3,40	./.	1/1:16,0:24:16.05:125,16,0	1/1:11,0:13:3.37:82,3,0	1/1:12,0:14:11.95:132,12,0	1/1:56,0:62:39.22:279,39,0	1/1:14,0:19:19.38:197,19,0	0/1:26,14:43:99:1382,0,425	0/1:23,5:29:99:306,0,471	1/1:7,9:17:21.03:448,21,0	1/1:5,23:28:63.22:1491,63,0	1/1:13,0:19:21.60:251,22,0	0/0:22,0:22:45.14:0,45,679	0/0:19,0:19:48.16:0,48,758	0/0:18,0:20:18.25:0,18,488	0/0:15,0:23:4.50:0,5,178	0/1:14,1:17:24.98:131,0,25	0/1:26,6:35:99:559,0,409	1/1:19,7:28:31.85:758,32,0	1/1:5,6:13:15.05:357,15,0	1/1:8,8:16:15.52:358,16,0	1/1:7,13:18:18.06:428,18,0	1/1:16,0:23:27.86:347,28,0	0/1:24,19:46:99:1766,0,214	0/1:29,14:41:99:1378,0,195	0/1:20,12:32:99:793,0,319
chr10	53401891	.	AT	A	353.76	PASS	AB=0.853;AC=11;AF=0.196;AN=56;BaseQRankSum=10.950;DP=758;FS=0.562;HRun=2;HaplotypeScore=210.4234;InbreedingCoeff=-0.2204;MQ=53.50;MQ0=0;MQRankSum=-9.478;QD=1.10;ReadPosRankSum=2.179;VQSLOD=-0.6837;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,1:26:51.81:0,52,987	0/0:12,0:12:36.12:0,36,540	0/0:22,0:19:57.19:0,57,854	0/0:19,0:16:36.12:0,36,513	0/0:31,11:42:72.01:0,72,1079	0/1:16,10:26:99:126,0,636	0/0:7,1:8:18.06:0,18,270	0/0:46,0:45:99:0,126,1850	0/1:18,6:24:57.73:58,0,630	0/1:47,6:52:61.19:61,0,1781	0/1:41,7:47:2.77:3,0,1348	0/0:19,0:19:54.18:0,54,810	0/0:24,0:24:63.19:0,63,904	0/1:16,8:24:68.73:69,0,476	0/0:25,0:25:75.25:0,75,1123	0/0:19,0:19:57.18:0,57,834	0/0:13,2:15:32.24:0,32,385	0/1:14,1:15:2.78:3,0,433	0/1:23,1:24:15.54:16,0,831	0/0:55,3:58:21.42:0,21,1685	0/0:18,1:18:43.21:0,43,595	0/0:16,0:16:45.11:0,45,649	0/0:14,0:14:38.98:0,39,584	0/1:13,1:14:6.42:6,0,356	0/1:17,12:29:92.77:93,0,566	0/1:40,2:42:21.34:21,0,1540	0/0:47,2:49:42.43:0,42,1668	0/1:19,4:23:37.63:38,0,701
chr10	53401898	.	A	AG	1527.77	PASS	AB=0.834;AC=14;AF=0.250;AN=56;BaseQRankSum=12.643;DP=754;FS=6.180;HRun=0;HaplotypeScore=217.3211;InbreedingCoeff=-0.3333;MQ=52.57;MQ0=1;MQRankSum=-10.970;QD=3.29;ReadPosRankSum=0.410;VQSLOD=2.2304;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,1:28:40.94:0,41,832	0/0:14,0:14:39.13:0,39,545	0/0:25,0:20:60.11:0,60,814	0/0:18,0:15:39.12:0,39,527	0/0:29,16:45:68.23:0,68,873	0/1:15,13:28:99:172,0,365	0/1:8,2:10:24.65:25,0,209	0/1:41,3:43:93.34:93,0,1326	0/1:18,6:24:99:120,0,453	0/1:43,8:50:99:237,0,1489	0/1:38,9:46:94.73:95,0,960	0/0:19,0:19:57.18:0,57,781	0/0:22,0:22:66.22:0,66,923	0/1:16,11:27:98.88:99,0,362	0/0:23,0:23:69.23:0,69,965	0/0:18,0:18:54.18:0,54,755	0/0:9,6:15:23.94:0,24,235	0/1:14,1:15:17.66:18,0,347	0/1:22,3:25:99:117,0,713	0/1:45,11:56:99:173,0,1114	0/0:14,3:17:18.35:0,18,398	0/0:16,0:16:36.12:0,36,504	0/0:15,0:15:33.03:0,33,461	0/0:13,0:13:29.73:0,30,389	0/1:16,12:28:99:146,0,328	0/1:38,4:42:99:169,0,1262	0/1:43,4:47:64.29:64,0,1222	0/1:16,5:21:99:158,0,451
chr10	53401902	.	GAGAT	G	250.61	PASS	AB=0.938;AC=6;AF=0.107;AN=56;BaseQRankSum=10.585;DP=751;FS=5.948;HRun=0;HaplotypeScore=256.7620;InbreedingCoeff=-0.1230;MQ=51.30;MQ0=1;MQRankSum=-6.697;QD=1.47;ReadPosRankSum=0.859;VQSLOD=1.8192;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:49.96:0,50,1675	0/0:14,0:14:39.11:0,39,973	0/0:25,0:21:52.06:0,52,1413	0/0:17,0:14:36.08:0,36,863	0/0:44,3:47:35.06:0,35,1364	0/1:19,9:28:99:130,0,526	0/0:10,0:10:15.05:0,15,418	0/0:43,0:42:96.47:0,96,2574	0/1:23,4:27:92.61:93,0,732	0/0:53,0:52:50.72:0,51,3004	0/0:43,0:42:15.32:0,15,1378	0/0:18,0:18:54.19:0,54,1469	0/0:22,0:22:66.23:0,66,1800	0/0:29,0:29:27.31:0,27,752	0/0:22,0:22:63.19:0,63,1598	0/0:18,0:18:54.19:0,54,1511	0/0:15,0:15:13.10:0,13,264	0/0:14,0:14:11.98:0,12,587	0/1:23,0:23:14.01:14,0,1473	0/0:54,0:54:28:0,28,1650	0/0:19,0:17:32.30:0,32,549	0/0:14,0:14:36.12:0,36,1005	0/0:14,0:14:33.11:0,33,923	0/0:12,0:12:30.10:0,30,839	0/1:29,0:29:28.31:28,0,413	0/1:41,0:41:73.27:73,0,2309	0/0:49,0:49:76.50:0,76,2093	0/1:22,0:22:36.01:36,0,950
chr10	53401912	.	T	TA	4776.10	PASS	AB=0.730;AC=16;AF=0.286;AN=56;BaseQRankSum=8.302;DP=765;FS=10.809;HRun=1;HaplotypeScore=220.2161;InbreedingCoeff=-0.4022;MQ=50.63;MQ0=1;MQRankSum=-9.203;QD=8.84;ReadPosRankSum=-0.437;VQSLOD=0.9504;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,1:29:57.08:0,57,797	0/0:11,0:11:33.11:0,33,461	0/0:27,0:22:66.19:0,66,877	0/0:15,0:13:30.07:0,30,375	0/1:20,24:44:99:189,0,413	0/1:10,15:25:53.80:335,0,54	0/0:6,5:11:11.83:0,12,163	0/1:27,18:44:99:640,0,865	0/1:14,14:27:99:330,0,225	0/1:36,14:49:99:507,0,1055	0/1:24,12:35:99:182,0,470	0/0:20,0:20:57.19:0,57,794	0/0:25,0:25:75.25:0,75,1043	0/1:16,14:30:99:149,0,217	0/0:20,0:20:57.19:0,57,797	0/0:20,0:20:60.20:0,60,839	0/1:9,10:17:99:124,0,110	0/1:11,1:12:74.61:75,0,188	0/1:18,7:25:99:309,0,538	0/1:36,20:56:99:442,0,601	0/1:10,10:17:89.46:89,0,150	0/0:14,0:14:42.12:0,42,569	0/0:16,0:16:48.15:0,48,654	0/0:15,1:16:39.03:0,39,541	0/1:15,16:31:97.38:344,0,97	0/1:31,12:43:99:493,0,958	0/1:39,10:47:99:161,0,797	0/1:19,8:27:99:406,0,285
chr10	53406291	.	CAGAGAGAAAGAGAGAGAG	C	1259.58	PASS	AB=1.000;AC=18;AF=0.346;AN=52;BaseQRankSum=2.376;DP=481;FS=32.497;HRun=0;HaplotypeScore=227.4603;InbreedingCoeff=0.2420;MQ=46.62;MQ0=19;MQRankSum=0.007;QD=4.84;ReadPosRankSum=-0.597;VQSLOD=1.4531;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:34:57.53:0,58,3002	0/0:8,0:8:18.06:0,18,1274	./.	0/0:4,0:1:0:0,0,0	1/1:3,23:25:1.25:3,1,0	1/1:15,6:23:8.83:199,9,0	1/1:13,1:13:11.92:90,12,0	0/1:26,0:23:70.99:121,0,71	1/1:15,3:16:17.11:348,17,0	0/1:19,0:17:8.20:8,0,686	0/1:18,0:18:12.14:12,0,396	0/0:15,0:15:32.94:0,33,1391	0/0:15,0:15:36.05:0,36,1406	./.	0/0:24,0:24:62.94:0,63,2963	0/0:14,0:14:38.85:0,39,1796	0/1:29,0:28:99:255,0,1623	0/1:11,0:11:78.85:79,0,414	0/1:21,0:18:22.72:23,0,1308	0/0:18,0:18:14.85:0,15,341	0/1:14,0:11:8.55:9,0,445	0/0:22,0:22:9.55:0,10,1807	0/0:8,0:8:20.27:0,20,969	0/0:27,0:25:45.05:0,45,2263	1/1:17,3:22:21.59:243,22,0	0/1:18,0:17:35.90:36,0,532	0/0:14,0:14:18.06:0,18,697	0/0:4,0:2:5.95:0,6,42
chr10	53406297	.	GAA	G	2470.46	PASS	AB=0.990;AC=33;AF=0.611;AN=54;BaseQRankSum=4.668;DP=442;FS=2.771;HRun=3;HaplotypeScore=109.1859;InbreedingCoeff=0.4255;MQ=47.06;MQ0=16;MQRankSum=-0.054;QD=6.88;ReadPosRankSum=-1.118;VQSLOD=-0.0567;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:34,0:33:99:109,0,272	0/0:7,0:7:17.59:0,18,213	./.	0/0:3,0:1:0:0,0,0	1/1:25,0:24:2.82:25,3,0	1/1:20,0:20:8.83:70,9,0	1/1:13,0:12:10.36:88,10,0	1/1:15,0:13:32.82:211,33,0	1/1:17,0:15:17.81:134,18,0	1/1:16,0:14:31.40:237,31,0	1/1:16,1:17:18:191,18,0	0/0:13,0:13:11.23:0,11,257	0/0:13,0:13:6.38:0,6,246	0/1:13,0:12:0:0,0,0	0/0:24,0:24:21.34:0,21,593	0/0:15,0:15:35.62:0,36,461	1/1:29,2:30:57.88:505,58,0	1/1:7,4:11:26.74:185,27,0	0/1:17,0:15:7.05:193,0,7	1/1:15,0:15:3:27,3,0	0/1:13,0:10:2.98:88,0,3	0/1:22,0:22:41.95:42,0,294	0/0:8,0:8:19.52:0,20,127	0/1:28,0:26:14.07:14,0,254	1/1:20,0:20:23.91:191,24,0	1/1:14,1:14:23.87:211,24,0	0/1:12,1:13:1.01:105,0,1	1/1:4,0:2:2.96:19,3,0
chr10	53408267	.	GA	G	5668.19	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=13.105;DP=611;FS=25.407;HRun=2;HaplotypeScore=60.4974;InbreedingCoeff=0.9945;MQ=91.12;MQ0=0;MQRankSum=-2.269;QD=36.33;ReadPosRankSum=2.306;VQSLOD=2.8893;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:87.21:0,87,1216	0/0:5,0:5:15.05:0,15,225	0/0:29,0:29:73.80:0,74,1054	0/0:25,0:25:31.23:0,31,807	0/0:17,0:17:51.15:0,51,726	0/0:16,0:16:45.14:0,45,649	0/0:23,0:23:69.22:0,69,1012	0/0:36,0:36:99:0,105,1504	0/0:26,0:26:75.24:0,75,1102	1/1:1,23:24:69.22:895,69,0	1/1:0,12:12:33.11:428,33,0	0/0:24,0:24:72.23:0,72,1059	0/0:28,0:28:81.26:0,81,1177	0/0:12,0:12:36.11:0,36,518	0/0:32,0:32:93.32:0,93,1392	0/0:26,0:26:72.23:0,72,1059	0/0:30,0:30:90.26:0,90,1303	0/0:22,0:22:66.22:0,66,985	1/1:1,20:21:60.18:757,60,0	1/1:0,19:19:57.10:700,57,0	1/1:4,29:33:90.28:1152,90,0	0/0:13,0:13:39.13:0,39,583	0/0:12,0:12:36.10:0,36,500	0/0:25,0:25:72.23:0,72,1053	0/0:24,0:24:69.22:0,69,996	1/1:0,23:23:69.20:879,69,0	1/1:1,18:19:51.17:662,51,0	1/1:0,5:5:15.05:195,15,0
chr10	53409498	.	G	GTT	8156.85	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=7.694;DP=484;FS=1.320;HRun=8;HaplotypeScore=116.3200;InbreedingCoeff=0.9842;MQ=70.91;MQ0=5;MQRankSum=-9.153;QD=26.57;ReadPosRankSum=-0.564;VQSLOD=4.1860;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:17.64:0,18,498	0/0:6,0:6:9.01:0,9,100	0/0:35,0:23:38.15:0,38,386	0/0:25,0:19:20.41:0,20,176	1/1:6,24:31:78.25:1196,78,0	1/1:6,13:20:42.14:647,42,0	1/1:2,6:8:24.08:380,24,0	1/1:14,0:23:43.29:433,43,0	1/1:1,9:9:27.09:428,27,0	1/1:13,0:20:43.54:456,44,0	1/1:12,0:23:57.28:493,57,0	0/0:13,0:13:39.08:0,39,416	0/0:11,0:11:33.09:0,33,368	1/1:4,3:7:18.04:241,18,0	0/0:11,0:11:30.08:0,30,334	0/0:16,0:16:48.10:0,48,515	1/1:6,11:16:30.08:450,30,0	1/1:6,8:14:27.09:421,27,0	1/1:16,0:22:51.42:389,51,0	1/1:10,0:17:41.59:369,42,0	1/1:11,0:12:13.95:104,14,0	0/0:8,0:8:21.04:0,21,224	0/0:13,0:13:36.03:0,36,385	0/0:17,0:17:48.13:0,48,534	1/1:7,11:18:48.15:720,48,0	1/1:7,0:16:45.91:446,46,0	1/1:12,0:26:72.26:611,72,0	1/1:11,0:18:38.86:372,39,0
chr10	53409503	.	T	TG	1033.20	PASS	AB=0.921;AC=11;AF=0.196;AN=56;BaseQRankSum=10.980;DP=488;FS=0.410;HRun=0;HaplotypeScore=125.9729;InbreedingCoeff=0.1809;MQ=68.30;MQ0=7;MQRankSum=-8.032;QD=6.01;ReadPosRankSum=1.828;VQSLOD=3.4143;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:52.26:0,52,749	0/0:6,0:6:15.01:0,15,174	0/0:33,0:20:43.06:0,43,524	0/0:33,0:18:15.14:0,15,215	0/0:32,0:32:78.55:0,79,433	0/0:16,0:16:44.85:0,45,243	0/0:9,0:9:26.49:0,26,169	0/0:25,0:23:56.95:0,57,402	0/0:11,0:10:28.43:0,28,158	0/1:21,1:22:90.37:90,0,150	0/1:21,2:23:31.83:135,0,32	0/0:13,0:13:39.13:0,39,544	0/0:11,0:11:33.11:0,33,461	0/0:7,0:7:15.67:0,16,89	0/0:10,0:10:30.10:0,30,419	0/0:17,0:17:51.16:0,51,697	0/1:16,1:16:14.11:14,0,122	0/0:15,0:15:37.17:0,37,217	0/1:19,6:23:13.19:232,0,13	1/1:15,4:19:8.91:239,9,0	0/1:7,2:8:13.81:53,0,14	0/0:8,0:8:24.07:0,24,319	0/0:13,0:13:39.11:0,39,514	0/0:17,0:17:51.16:0,51,696	0/0:19,0:19:49.61:0,50,303	0/1:18,0:18:61.26:96,0,61	1/1:21,5:26:8.95:275,9,0	0/1:13,0:13:51.50:51,0,68
chr10	53409540	.	GT	G	6602.37	PASS	AB=0.655;AC=32;AF=0.571;AN=56;BaseQRankSum=8.233;DP=549;FS=4.052;HRun=10;HaplotypeScore=97.1479;InbreedingCoeff=0.8011;MQ=66.45;MQ0=9;MQRankSum=-1.931;QD=19.48;ReadPosRankSum=0.631;VQSLOD=5.2526;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:72.08:0,72,773	0/0:5,0:5:15.03:0,15,159	0/0:48,0:22:0.72:0,1,234	0/0:46,3:19:21.41:0,21,201	1/1:8,24:34:82.02:683,82,0	1/1:4,17:20:23.88:320,24,0	1/1:2,6:8:17.98:156,18,0	1/1:9,26:35:76.04:663,76,0	1/1:4,8:11:23.98:204,24,0	1/1:2,24:27:73.80:630,74,0	1/1:3,24:27:24.60:548,25,0	0/0:10,0:10:27.06:0,27,291	0/0:13,0:13:33.05:0,33,352	1/1:2,7:9:20.86:171,21,0	0/0:10,0:11:23.90:0,24,247	0/0:14,0:14:39.10:0,39,425	0/1:7,7:14:18.10:179,0,18	1/1:3,19:22:20.74:399,21,0	1/1:7,12:19:6.90:257,7,0	1/1:2,20:22:59.82:504,60,0	0/1:4,5:9:41.78:85,0,42	0/0:7,0:7:18.05:0,18,199	0/0:13,0:13:36.08:0,36,388	0/0:16,0:16:45.11:0,45,490	1/1:4,17:21:53.98:469,54,0	1/1:5,20:25:65.86:557,66,0	1/1:4,20:24:62.96:543,63,0	1/1:0,10:10:26.99:234,27,0
chr10	53410532	.	CTTA	C	10122.20	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=16.329;DP=664;FS=0.310;HRun=0;HaplotypeScore=95.5056;InbreedingCoeff=0.9997;MQ=90.70;MQ0=0;MQRankSum=-4.414;QD=47.75;ReadPosRankSum=3.301;VQSLOD=6.5058;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:48.16:0,48,1135	0/0:10,0:10:30.10:0,30,683	0/0:32,0:32:96.33:0,96,2107	0/0:23,0:23:63.08:0,63,1398	0/0:25,0:25:75.26:0,75,1764	0/0:28,0:28:84.29:0,84,1965	0/0:19,0:19:57.18:0,57,1301	0/0:43,0:43:99:0,123,2776	0/0:27,0:27:81.24:0,81,1866	1/1:0,24:24:72.24:1241,72,0	1/1:0,35:34:90.31:1584,90,0	0/0:22,0:22:66.23:0,66,1546	0/0:37,0:37:99:0,108,2552	0/0:18,0:18:54.19:0,54,1272	0/0:20,0:20:60.21:0,60,1419	0/0:18,0:18:54.19:0,54,1256	0/0:13,0:13:33.11:0,33,750	0/0:12,0:12:36.12:0,36,850	1/1:3,22:26:66.01:1162,66,0	1/1:0,45:44:99:2170,123,0	1/1:1,16:17:42.62:742,43,0	0/0:28,0:28:84.29:0,84,1986	0/0:27,0:26:81.28:0,81,1893	0/0:15,0:15:45.15:0,45,1064	0/0:19,0:19:57.20:0,57,1345	1/1:0,24:24:72.25:1270,72,0	1/1:0,31:31:84.29:1479,84,0	1/1:0,10:10:27.09:474,27,0
chr10	53410734	.	TG	T	6949.17	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=14.409;DP=725;FS=0.642;HRun=2;HaplotypeScore=69.6264;InbreedingCoeff=0.9995;MQ=89.07;MQ0=0;MQRankSum=-0.779;QD=36.57;ReadPosRankSum=2.438;VQSLOD=5.5230;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:84.28:0,84,1259	0/0:12,0:12:36.11:0,36,520	0/0:20,1:21:24.24:0,24,853	0/0:34,0:34:88.92:0,89,1233	0/0:37,0:37:99:0,105,1574	0/0:28,0:28:84.28:0,84,1259	0/0:16,0:16:48.16:0,48,720	0/0:25,0:25:75.25:0,75,1123	0/0:35,0:35:99:0,99,1481	1/1:1,23:24:72.22:913,72,0	1/1:2,21:23:63.20:818,63,0	0/0:26,0:26:78.26:0,78,1166	0/0:35,0:35:99:0,102,1462	0/0:31,0:31:90.30:0,90,1349	0/0:27,0:27:75.25:0,75,1120	0/0:21,0:21:63.19:0,63,907	0/0:19,0:19:57.19:0,57,842	0/0:22,0:22:62.70:0,63,907	1/1:0,17:17:51.17:661,51,0	1/1:0,30:30:81.26:1052,81,0	1/1:0,22:22:66.21:857,66,0	0/0:25,0:25:72.24:0,72,1077	0/0:30,0:30:90.29:0,90,1327	0/0:31,0:31:93.32:0,93,1394	0/0:30,0:30:87.29:0,87,1304	1/1:0,36:36:99:1402,108,0	1/1:1,23:24:69.22:895,69,0	1/1:0,14:14:27.09:350,27,0
chr10	53413138	.	A	AG	435.99	PASS	AB=1.000;AC=13;AF=0.283;AN=46;BaseQRankSum=3.866;DP=117;FS=0.000;HRun=8;HaplotypeScore=16.0632;InbreedingCoeff=0.5928;MQ=58.30;MQ0=15;MQRankSum=-5.611;QD=12.82;ReadPosRankSum=-0.786;VQSLOD=0.7006;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:8:11.82:0,12,109	0/0:1,0:1:3:0,3,27	0/1:11,0:2:15.22:15,0,21	0/0:16,0:3:3:0,3,27	0/0:4,0:2:6:0,6,55	0/0:1,0:1:3:0,3,27	0/0:3,0:2:6:0,6,55	0/0:7,0:5:15.01:0,15,137	0/0:4,0:4:9:0,9,82	1/1:1,2:3:9.03:104,9,0	1/1:1,2:2:6.02:69,6,0	./.	./.	0/0:3,0:2:6:0,6,55	0/0:4,0:4:12.01:0,12,109	0/0:3,0:3:9:0,9,82	0/0:8,0:8:21.01:0,21,192	0/0:6,0:6:18.01:0,18,165	1/1:1,4:5:12.04:138,12,0	1/1:0,4:4:12.04:138,12,0	./.	./.	0/0:3,0:3:9:0,9,82	0/0:5,0:4:11.99:0,12,105	0/0:5,0:4:12.01:0,12,110	1/1:2,1:3:5.98:54,6,0	1/1:2,3:3:6.02:69,6,0	./.
chr10	53413225	.	AAAG	A	688.52	PASS	AB=0.900;AC=15;AF=0.268;AN=56;BaseQRankSum=7.564;DP=276;FS=0.000;HRun=0;HaplotypeScore=61.8384;InbreedingCoeff=0.7501;MQ=62.32;MQ0=2;MQRankSum=-3.141;QD=9.84;ReadPosRankSum=-0.754;VQSLOD=2.5885;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:66.23:0,66,1416	0/0:4,0:4:12.04:0,12,261	0/0:14,0:7:13.84:0,14,203	0/0:8,0:2:2.99:0,3,65	0/0:20,0:20:57.20:0,57,1192	0/0:7,0:7:21.05:0,21,415	0/0:6,0:6:18.06:0,18,390	0/0:31,0:31:87.24:0,87,1702	0/0:6,0:6:15.05:0,15,318	1/1:6,1:7:14.66:162,15,0	0/1:16,2:16:17.04:110,0,17	0/0:5,0:5:15.05:0,15,325	0/0:9,0:9:27.09:0,27,586	0/0:9,0:9:24.08:0,24,521	0/0:4,0:4:12.04:0,12,237	0/0:8,0:8:21.07:0,21,456	0/0:12,0:12:30.10:0,30,625	0/0:13,0:13:30.10:0,30,626	1/1:9,1:10:21.35:178,21,0	1/1:11,0:11:6.03:58,6,0	1/1:5,1:6:13.28:117,13,0	0/0:1,0:1:3.01:0,3,65	0/0:7,0:7:21.04:0,21,410	0/0:9,0:9:27.09:0,27,586	0/0:11,0:11:30.08:0,30,571	1/1:6,2:8:8.65:122,9,0	1/1:6,1:7:6.39:96,6,0	1/1:3,0:3:4.76:26,5,0
chr10	53413230	.	A	AG	245.65	PASS	AB=0.939;AC=13;AF=0.232;AN=56;BaseQRankSum=7.736;DP=274;FS=3.651;HRun=0;HaplotypeScore=52.4791;InbreedingCoeff=0.5821;MQ=65.01;MQ0=2;MQRankSum=-3.409;QD=3.78;ReadPosRankSum=0.609;VQSLOD=2.6751;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:69.22:0,69,948	0/0:4,0:4:12.04:0,12,168	0/0:16,0:9:14.95:0,15,152	0/0:8,0:2:3.01:0,3,42	0/0:19,0:19:57.13:0,57,680	0/0:7,0:7:21.07:0,21,275	0/0:6,0:6:18.06:0,18,239	0/0:32,0:32:93.29:0,93,1229	0/0:6,0:6:15.05:0,15,202	1/1:6,0:6:10.38:75,10,0	0/1:15,1:15:27.41:47,0,27	0/0:5,0:5:15.05:0,15,210	0/0:9,0:9:27.09:0,27,378	0/0:8,0:8:24.08:0,24,320	0/0:4,0:4:12.03:0,12,148	0/0:7,0:7:21.07:0,21,293	0/0:15,0:15:33.08:0,33,399	0/0:12,0:12:30.08:0,30,386	1/1:7,2:9:1.68:115,2,0	0/1:11,0:11:1.03:31,0,1	1/1:6,0:6:10.56:44,11,0	0/0:1,0:1:3.01:0,3,42	0/0:6,0:6:18.06:0,18,250	0/0:9,0:9:27.09:0,27,377	0/0:12,0:12:30.10:0,30,401	1/1:7,0:7:5.85:30,6,0	0/1:6,1:7:2.26:49,0,2	1/1:3,0:3:1.64:9,2,0
chr10	53413234	.	G	GA	2999.20	PASS	AB=0.938;AC=22;AF=0.393;AN=56;BaseQRankSum=-10.326;DP=276;FS=5.859;HRun=8;HaplotypeScore=43.8204;InbreedingCoeff=0.5990;MQ=65.07;MQ0=2;MQRankSum=2.158;QD=19.60;ReadPosRankSum=-2.276;VQSLOD=2.5279;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:53.95:0,54,484	0/0:4,0:4:12.01:0,12,110	0/0:15,0:9:18.01:0,18,134	0/0:9,0:2:3:0,3,27	1/1:0,18:18:54.09:595,54,0	1/1:0,7:7:21.06:242,21,0	1/1:0,7:7:18.05:208,18,0	1/1:11,22:33:54.03:747,54,0	1/1:2,3:5:9.03:104,9,0	0/0:6,0:6:10.28:0,10,47	0/1:18,0:17:13.39:13,0,107	0/0:5,0:5:15.01:0,15,137	0/0:9,0:9:27.01:0,27,247	1/1:0,8:8:24.07:277,24,0	0/1:2,1:3:21.45:29,0,21	0/0:7,0:7:21.01:0,21,192	1/1:1,13:13:27.08:312,27,0	1/1:1,10:11:24.07:277,24,0	0/1:10,0:10:29.47:29,0,43	0/0:12,0:12:9.95:0,10,92	0/0:6,0:6:13.65:0,14,62	0/0:1,0:1:3:0,3,27	0/0:7,0:7:18:0,18,160	0/0:9,0:9:24.01:0,24,220	1/1:0,12:12:30.09:346,30,0	0/0:8,0:8:10.36:0,10,58	0/1:7,0:7:24.49:24,0,37	0/0:3,0:3:4.67:0,5,30
chr10	53414263	.	G	GTGTGTA	2014.01	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=-0.895;DP=453;FS=5.086;HRun=0;HaplotypeScore=107.7150;InbreedingCoeff=0.8512;MQ=58.15;MQ0=14;MQRankSum=-0.518;QD=15.86;ReadPosRankSum=-0.130;VQSLOD=2.5338;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:35.81:0,36,289	0/0:4,0:4:5.99:0,6,49	0/0:18,0:15:42.10:0,42,461	0/0:12,0:8:21.51:0,22,226	0/0:19,0:19:29.69:0,30,232	0/0:21,0:19:14.48:0,14,256	0/0:14,0:14:21.41:0,21,200	0/0:17,0:16:20.93:0,21,299	0/0:13,0:13:20.51:0,21,168	1/1:17,0:18:47.64:548,48,0	0/1:14,0:14:2.05:93,0,2	0/0:12,0:12:23.52:0,24,275	0/0:14,0:13:26.62:0,27,223	0/0:16,0:16:14.98:0,15,142	0/0:10,0:10:14.74:0,15,160	0/0:16,0:16:3.04:0,3,131	0/0:21,0:20:32.88:0,33,317	0/0:21,0:20:42.21:0,42,475	1/1:14,0:13:32.98:316,33,0	1/1:15,0:15:32.81:283,33,0	1/1:23,0:19:18.45:176,18,0	0/0:19,0:19:38.92:0,39,345	0/0:14,0:14:23.90:0,24,187	0/0:26,0:24:45.66:0,46,550	0/0:17,0:16:19.43:0,19,174	1/1:3,11:16:29.72:429,30,0	1/1:20,0:20:18.56:346,19,0	1/1:1,0:7:2.58:13,3,0
chr10	53415139	.	AC	A	5842.75	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=13.441;DP=738;FS=0.000;HRun=2;HaplotypeScore=71.7341;InbreedingCoeff=0.9997;MQ=81.34;MQ0=0;MQRankSum=-1.355;QD=36.75;ReadPosRankSum=2.555;VQSLOD=5.4580;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,108,1535	0/0:12,0:12:36.12:0,36,540	0/0:19,0:19:57.18:0,57,804	0/0:20,0:20:54.16:0,54,738	1/1:0,24:24:72.23:935,72,0	1/1:0,27:27:75.24:974,75,0	1/1:0,21:21:60.20:779,60,0	0/0:34,0:34:99:0,99,1484	1/1:0,30:30:90.29:1168,90,0	0/0:34,0:34:99:0,102,1523	0/0:25,0:25:75.24:0,75,1098	0/0:34,0:34:99:0,102,1500	0/0:27,0:27:78.25:0,78,1150	1/1:0,26:26:69.22:896,69,0	0/0:33,0:33:99:0,99,1452	0/0:25,0:25:75.23:0,75,1080	0/0:23,0:23:69.19:0,69,983	0/0:10,0:10:27.06:0,27,380	0/0:23,0:23:66.22:0,66,971	0/0:26,0:26:78.24:0,78,1129	0/0:31,0:31:90.30:0,90,1349	0/0:32,0:32:93.31:0,93,1388	0/0:22,0:22:66.20:0,66,946	0/0:32,0:32:93.31:0,93,1388	1/1:0,31:31:84.27:1091,84,0	0/0:31,0:31:83.86:0,84,1201	0/0:36,0:36:99:0,108,1590	0/0:12,0:12:33.11:0,33,494
chr10	53416484	.	CT	C	4914.57	PASS	AB=0.839;AC=42;AF=0.750;AN=56;BaseQRankSum=5.370;DP=673;FS=1.313;HRun=14;HaplotypeScore=93.6938;InbreedingCoeff=0.1125;MQ=71.25;MQ0=0;MQRankSum=-0.157;QD=7.69;ReadPosRankSum=3.605;VQSLOD=4.2971;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:13,18:38:69.09:414,69,0	1/1:5,8:14:22.81:150,23,0	0/1:21,3:18:39.10:55,0,39	0/1:18,0:15:1.12:1,0,85	0/1:11,17:29:3.90:247,0,4	1/1:8,16:26:58.43:372,58,0	1/1:5,18:26:50.68:326,51,0	1/1:14,12:30:12.79:199,13,0	1/1:6,11:18:27.07:173,27,0	0/1:18,2:19:17.05:17,0,258	0/1:24,1:28:34.72:35,0,291	1/1:13,3:18:1.53:123,2,0	1/1:8,8:17:25.23:168,25,0	0/1:7,14:23:7.85:216,0,8	1/1:6,17:25:48.63:320,49,0	1/1:6,10:17:28.71:191,29,0	1/1:9,0:33:49.90:145,50,0	1/1:1,1:14:25.37:85,25,0	0/1:14,5:20:69.98:70,0,115	0/1:31,6:38:44.33:44,0,467	0/1:24,2:26:30.91:31,0,171	1/1:7,24:32:38.11:394,38,0	1/1:13,16:31:49.10:329,49,0	1/1:4,20:24:56.48:390,56,0	1/1:4,23:28:61.49:417,61,0	0/0:26,1:30:22.93:0,23,463	0/1:19,2:21:2.17:2,0,256	0/0:4,0:4:2.98:0,3,22
chr10	53418076	.	GTTTGT	G	5418.13	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=12.430;DP=595;FS=4.387;HRun=0;HaplotypeScore=114.8576;InbreedingCoeff=0.9844;MQ=68.75;MQ0=3;MQRankSum=-4.324;QD=34.29;ReadPosRankSum=1.856;VQSLOD=4.5488;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:58.39:0,58,1407	0/0:4,0:4:9.03:0,9,260	0/0:35,0:26:16.26:0,16,860	0/0:30,0:22:24.55:0,25,498	0/0:17,0:17:45.14:0,45,1178	0/0:24,0:24:57.19:0,57,1501	0/0:28,0:28:61.93:0,62,1646	0/0:44,0:44:93.28:0,93,2192	0/0:15,0:15:33.11:0,33,932	1/1:5,11:16:33.10:532,33,0	1/1:6,16:22:45.14:824,45,0	0/0:12,0:12:33.11:0,33,864	0/0:20,0:20:48.16:0,48,1253	0/0:19,0:19:45.14:0,45,1219	0/0:21,0:21:48.16:0,48,1298	0/0:21,0:21:54.19:0,54,1448	0/0:34,0:33:78.27:0,78,2131	0/0:15,0:15:39.13:0,39,1001	1/1:10,12:22:36.12:557,36,0	1/1:5,15:20:39.10:663,39,0	1/1:7,12:19:27.09:493,27,0	0/0:14,0:14:33.07:0,33,768	0/0:10,0:10:27.09:0,27,780	0/0:38,0:38:93.32:0,93,2518	0/0:9,0:9:24.05:0,24,523	1/1:4,23:27:69.24:1268,69,0	1/1:1,16:17:41.99:796,42,0	1/1:8,7:15:15.05:286,15,0
chr10	53418340	.	GTAAA	G	1390.70	PASS	AB=1.000;AC=19;AF=0.432;AN=44;BaseQRankSum=-0.091;DP=286;FS=6.719;HRun=0;HaplotypeScore=60.0541;InbreedingCoeff=0.5760;MQ=76.44;MQ0=2;MQRankSum=-0.201;QD=10.38;ReadPosRankSum=-2.182;VQSLOD=1.0195;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:12.02:0,12,192	0/0:3,0:3:3.01:0,3,71	./.	./.	1/1:5,0:9:5.04:34,5,0	1/1:6,10:15:18.06:281,18,0	1/1:8,0:8:3.01:40,3,0	1/1:17,0:30:18.29:132,18,0	1/1:6,2:8:3.01:47,3,0	0/0:12,0:12:6:0,6,53	./.	0/0:6,0:6:3.01:0,3,71	0/0:11,0:11:3.01:0,3,71	1/1:6,2:8:6.02:94,6,0	0/0:10,0:10:12.04:0,12,248	0/0:11,0:11:6.02:0,6,142	1/1:8,13:21:30.10:468,30,0	1/1:3,5:8:12.04:187,12,0	0/0:12,0:12:15:0,15,136	./.	0/1:10,0:10:20.36:33,0,20	./.	./.	0/0:3,0:3:3:0,3,27	1/1:10,5:15:15.05:234,15,0	0/0:14,0:14:8.98:0,9,79	0/0:9,0:9:5.48:0,5,68	0/0:4,0:4:5.98:0,6,55
chr10	53419270	.	G	GTGGGACAGGTCCT	27655.80	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=1.729;DP=689;FS=9.748;HRun=0;HaplotypeScore=241.9360;InbreedingCoeff=0.9998;MQ=81.81;MQ0=0;MQRankSum=-17.257;QD=139.68;ReadPosRankSum=-0.577;VQSLOD=3.6713;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,102,3634	0/0:16,0:16:48.14:0,48,1865	0/0:18,0:18:45.15:0,45,1685	0/0:30,0:30:88.85:0,89,3133	0/0:26,0:26:75.26:0,75,2916	0/0:20,0:20:51.16:0,51,1901	0/0:16,0:16:48.16:0,48,1814	0/0:46,0:46:99:0,135,4701	0/0:21,0:21:60.21:0,60,2191	1/1:18,9:32:96.31:5019,96,0	1/1:14,21:37:87.17:4687,87,0	0/0:11,0:11:33.11:0,33,1343	0/0:33,0:33:96.33:0,96,3716	0/0:20,0:20:60.21:0,60,2371	0/0:23,0:23:63.20:0,63,2252	0/0:21,0:21:60.18:0,60,2300	0/0:23,0:23:69.21:0,69,2497	0/0:11,0:11:30.10:0,30,1184	1/1:14,4:21:60.21:3421,60,0	1/1:14,6:21:44.98:1953,45,0	1/1:9,5:17:33.11:1781,33,0	0/0:27,0:27:81.27:0,81,2969	0/0:38,0:38:99:0,111,4196	0/0:29,0:29:87.26:0,87,3157	0/0:28,0:28:84.29:0,84,3194	1/1:15,15:32:96.32:5577,96,0	1/1:10,10:25:56.91:3493,57,0	1/1:9,3:13:36.08:1724,36,0
chr10	53420222	.	AT	A	8611.99	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=12.391;DP=571;FS=1.827;HRun=7;HaplotypeScore=64.1901;InbreedingCoeff=0.9997;MQ=79.16;MQ0=0;MQRankSum=-2.437;QD=26.58;ReadPosRankSum=2.064;VQSLOD=5.6858;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:51.16:0,51,630	0/0:11,0:11:33.11:0,33,415	0/0:17,0:17:50.95:0,51,590	0/0:10,0:10:30.09:0,30,369	1/1:3,20:23:54.11:551,54,0	1/1:1,31:32:90.20:918,90,0	1/1:2,12:14:36.08:367,36,0	1/1:5,23:28:69.16:704,69,0	1/1:3,19:22:54.12:551,54,0	1/1:2,20:22:57.11:576,57,0	1/1:3,15:18:42.09:428,42,0	0/0:20,0:20:54.15:0,54,655	0/0:19,0:19:48.15:0,48,601	1/1:1,25:26:72.16:735,72,0	0/0:28,0:28:75.24:0,75,943	0/0:26,1:27:47.64:0,48,913	0/0:22,0:22:60.18:0,60,742	0/0:13,0:13:36.12:0,36,453	1/1:1,16:17:48.08:477,48,0	1/1:3,26:29:72.15:735,72,0	1/1:0,20:20:57.13:582,57,0	0/0:16,0:16:45.09:0,45,505	0/0:24,0:24:66.19:0,66,806	0/0:19,0:18:57.15:0,57,680	1/1:2,17:19:51.11:520,51,0	1/1:5,13:18:42.09:428,42,0	1/1:1,25:26:75.17:765,75,0	1/1:1,9:10:27.06:275,27,0
chr10	53420872	.	T	TATAC	7303.29	PASS	AB=0.923;AC=17;AF=0.315;AN=54;BaseQRankSum=9.749;DP=364;FS=2.705;HRun=0;HaplotypeScore=64.7315;InbreedingCoeff=0.8355;MQ=71.02;MQ0=5;MQRankSum=-2.157;QD=44.00;ReadPosRankSum=2.313;VQSLOD=5.1986;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:27.05:0,27,424	0/0:2,0:2:6.02:0,6,108	0/1:11,0:6:4.44:4,0,43	0/0:20,0:10:8.61:0,9,125	0/0:12,0:12:33.07:0,33,553	0/0:14,0:14:42.10:0,42,645	0/0:7,0:7:15.02:0,15,209	0/0:38,0:38:96.21:0,96,1337	0/0:7,0:7:21.05:0,21,347	1/1:1,17:20:57.10:1261,57,0	1/1:2,19:24:32.85:853,33,0	0/0:6,0:6:18.03:0,18,263	0/0:2,0:2:6.02:0,6,108	0/0:7,0:7:12.04:0,12,215	0/0:16,0:16:42.13:0,42,720	0/0:10,0:10:27.08:0,27,445	0/0:16,0:16:48.14:0,48,824	0/0:8,0:8:21.04:0,21,302	1/1:3,22:26:72.04:1269,72,0	1/1:6,22:28:57.20:1433,57,0	1/1:0,10:10:2.96:77,3,0	0/0:3,0:3:8.99:0,9,74	0/0:6,0:6:15.02:0,15,211	./.	0/0:13,0:13:33.07:0,33,506	1/1:1,21:23:63.16:1516,63,0	1/1:2,13:14:24.08:623,24,0	1/1:0,7:8:12.04:267,12,0
chr10	53421967	.	AC	A	5140.16	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=17.059;DP=716;FS=1.149;HRun=1;HaplotypeScore=136.0823;InbreedingCoeff=0.9992;MQ=85.40;MQ0=1;MQRankSum=-6.988;QD=34.97;ReadPosRankSum=-0.920;VQSLOD=4.3008;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:81.24:0,81,1242	0/0:17,0:17:51.17:0,51,815	0/0:21,0:21:63.20:0,63,965	0/0:29,0:29:81.24:0,81,1227	1/1:2,25:27:53.91:620,54,0	1/1:1,19:20:57.19:795,57,0	1/1:0,22:22:63.16:853,63,0	0/0:32,0:32:93.17:0,93,1243	1/1:1,26:24:69.23:954,69,0	0/0:21,0:21:63.21:0,63,1007	0/0:24,0:24:72.25:0,72,1148	0/0:27,0:27:81.26:0,81,1268	0/0:35,0:35:99:0,105,1675	1/1:0,30:30:84.28:1172,84,0	0/0:28,0:28:84.27:0,84,1319	0/0:30,0:30:90.28:0,90,1410	0/0:26,0:26:78.24:0,78,1220	0/0:21,0:21:63.21:0,63,1006	0/0:16,0:16:48.16:0,48,755	0/0:28,0:28:81.22:0,81,1222	0/0:43,0:43:99:0,129,2062	0/0:19,0:19:54.16:0,54,814	0/0:28,0:28:84.27:0,84,1300	0/0:24,0:24:72.23:0,72,1127	1/1:1,20:20:54.18:747,54,0	0/0:37,0:36:99:0,108,1694	0/0:28,0:28:81.27:0,81,1283	0/0:7,0:7:21.07:0,21,335
chr10	53421970	.	A	AG	3101.73	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=17.163;DP=717;FS=7.413;HRun=0;HaplotypeScore=142.2458;InbreedingCoeff=0.9992;MQ=85.79;MQ0=1;MQRankSum=-8.044;QD=20.41;ReadPosRankSum=-2.497;VQSLOD=3.9556;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:75.23:0,75,1024	0/0:18,0:18:54.16:0,54,721	0/0:22,0:22:66.19:0,66,865	0/0:28,0:28:69.26:0,69,1054	1/1:27,2:29:65.64:580,66,0	1/1:20,1:21:62.56:493,63,0	1/1:23,0:23:67.95:502,68,0	0/0:26,0:26:72.73:0,73,444	1/1:27,1:25:71.42:605,71,0	0/0:22,0:22:63.21:0,63,868	0/0:25,0:25:72.22:0,72,987	0/0:26,0:26:78.24:0,78,1057	0/0:35,0:35:99:0,105,1451	1/1:30,0:30:83.14:619,83,0	0/0:27,0:27:81.27:0,81,1130	0/0:29,0:29:87.27:0,87,1197	0/0:26,0:26:78.26:0,78,1087	0/0:22,0:22:63.21:0,63,874	0/0:17,0:17:51.15:0,51,680	0/0:26,0:26:78.23:0,78,1064	0/0:45,0:45:99:0,135,1849	0/0:19,0:19:53.51:0,54,683	0/0:32,0:32:90.20:0,90,1161	0/0:23,0:23:69.23:0,69,964	1/1:20,1:20:56.63:491,57,0	0/0:37,0:36:99:0,108,1510	0/0:28,0:28:84.27:0,84,1155	0/0:7,0:7:21.07:0,21,293
chr10	53426329	.	AACACAC	A	2365.63	PASS	AB=1.000;AC=16;AF=0.296;AN=54;BaseQRankSum=1.502;DP=494;FS=7.135;HRun=0;HaplotypeScore=108.5049;InbreedingCoeff=0.6965;MQ=64.51;MQ0=27;MQRankSum=4.639;QD=15.16;ReadPosRankSum=-0.842;VQSLOD=2.0392;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:42.12:0,42,910	0/0:7,0:7:12.04:0,12,287	0/0:34,0:20:3.01:0,3,71	0/0:31,0:16:6.02:0,6,127	0/0:20,0:19:6.10:0,6,162	0/0:21,0:19:23.94:0,24,197	0/0:9,0:9:8.93:0,9,68	0/0:28,0:25:30.55:0,31,610	0/0:11,0:10:13.83:0,14,87	1/1:7,14:21:35.60:730,36,0	./.	0/0:11,0:10:15:0,15,265	0/0:9,0:9:24.08:0,24,567	0/1:19,0:19:11.52:12,0,134	0/0:16,0:15:27.09:0,27,628	0/0:15,0:15:30.09:0,30,628	0/0:21,0:20:24.07:0,24,496	0/0:10,0:8:15.05:0,15,305	1/1:14,0:15:24.02:352,24,0	1/1:10,13:23:9.03:163,9,0	1/1:11,0:18:15.05:309,15,0	0/0:17,0:17:21.07:0,21,454	0/0:16,0:16:33.11:0,33,731	0/0:22,0:18:29.63:0,30,645	0/1:13,0:13:30.85:31,0,147	1/1:8,11:19:33.10:602,33,0	1/1:13,1:13:15.05:292,15,0	1/1:7,0:8:3.01:61,3,0
chr10	53426361	.	CAGAGAGAGAGAG	C	292.95	PASS	AB=0.934;AC=10;AF=0.263;AN=38;BaseQRankSum=3.032;DP=505;FS=28.981;HRun=0;HaplotypeScore=146.2603;InbreedingCoeff=0.2632;MQ=43.73;MQ0=40;MQRankSum=-3.066;QD=2.50;ReadPosRankSum=-0.364;VQSLOD=1.0748;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:34:6.02:0,6,214	0/0:9,0:9:1.36:0,1,3	./.	./.	./.	0/0:16,0:14:3.01:0,3,46	./.	0/0:27,0:25:7.11:0,7,25	0/0:10,2:10:0.47:0,0,1	0/0:26,0:26:25.06:0,25,194	./.	0/0:10,0:9:3.01:0,3,68	0/0:16,0:16:6.49:0,6,207	0/0:17,2:21:2.96:0,3,19	0/0:16,0:15:3.48:0,3,34	1/1:12,0:13:2.68:11,3,0	1/1:19,0:19:2.98:40,3,0	1/1:10,0:10:3.01:84,3,0	0/1:21,1:20:65.80:154,0,66	./.	1/1:29,0:24:3.01:47,3,0	0/0:15,0:15:3.01:0,3,88	./.	0/0:24,0:19:11.70:0,12,311	./.	0/0:25,0:24:12.42:0,12,136	0/1:17,0:15:12.10:70,0,12	./.
chr10	53427330	.	CA	C	5781.96	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=13.287;DP=744;FS=1.509;HRun=1;HaplotypeScore=68.8389;InbreedingCoeff=0.9999;MQ=89.74;MQ0=0;MQRankSum=-1.472;QD=36.14;ReadPosRankSum=3.860;VQSLOD=5.3000;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,132,2078	0/0:12,0:12:33.11:0,33,524	0/0:29,0:29:84.22:0,84,1279	0/0:27,0:27:75.21:0,75,1131	1/1:0,20:20:47.99:630,48,0	1/1:0,30:30:84.28:1172,84,0	1/1:0,19:19:48.16:670,48,0	0/0:35,0:35:99:0,105,1631	1/1:0,34:34:87.29:1215,87,0	0/0:35,0:35:99:0,105,1657	0/0:22,0:22:66.18:0,66,986	0/0:29,0:29:87.30:0,87,1391	0/0:20,0:20:60.19:0,60,936	1/1:0,29:29:72.24:1005,72,0	0/0:28,0:28:84.29:0,84,1343	0/0:26,0:26:78.25:0,78,1221	0/0:36,0:36:99:0,108,1652	0/0:12,0:12:36.10:0,36,549	0/0:25,0:25:75.25:0,75,1169	0/0:34,0:34:99:0,102,1627	0/0:31,0:31:93.29:0,93,1437	0/0:25,0:25:75.22:0,75,1172	0/0:30,0:30:90.29:0,90,1410	0/0:25,0:25:75.26:0,75,1199	1/1:0,28:28:78.26:1090,78,0	0/0:21,0:21:63.19:0,63,963	0/0:27,0:27:81.25:0,81,1248	0/0:11,0:11:33.11:0,33,527
chr10	53428536	.	TGGTGGTGGTGAC	T	3697.54	PASS	AB=1.000;AC=27;AF=0.482;AN=56;BaseQRankSum=11.567;DP=650;FS=17.850;HRun=0;HaplotypeScore=239.1969;InbreedingCoeff=0.7969;MQ=76.79;MQ0=1;MQRankSum=-10.118;QD=13.95;ReadPosRankSum=0.807;VQSLOD=1.0440;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,129,5023	0/0:8,0:8:24.07:0,24,834	0/0:38,0:31:57.68:0,58,1886	0/0:41,0:35:78.17:0,78,2137	0/1:23,0:23:4.26:20,0,4	1/1:21,0:20:21.67:182,22,0	1/1:20,0:20:22.44:575,22,0	0/0:33,0:33:72.25:0,72,2714	1/1:19,0:19:42.75:390,43,0	1/1:11,4:15:17.14:198,17,0	1/1:17,0:17:17.59:144,18,0	0/0:25,0:25:69.24:0,69,3273	0/0:25,0:25:69.10:0,69,2860	0/1:15,0:15:14.20:182,0,14	0/0:24,0:24:66.21:0,66,2916	0/0:12,0:12:30.10:0,30,1662	0/0:38,0:38:99:0,105,4864	0/1:12,0:12:3.74:4,0,1618	1/1:10,8:18:33.19:584,33,0	1/1:13,0:13:11.09:60,11,0	1/1:29,0:28:33.23:595,33,0	0/0:23,0:23:57.18:0,57,2302	0/0:21,0:21:51.18:0,51,2364	0/0:41,0:42:99:0,114,5284	1/1:19,0:19:10.69:72,11,0	1/1:24,0:24:26.62:538,27,0	1/1:17,0:17:18.87:134,19,0	1/1:3,0:3:5.27:21,5,0
chr10	53428545	.	TGAC	T	4888.45	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=16.122;DP=616;FS=28.800;HRun=0;HaplotypeScore=123.8166;InbreedingCoeff=0.9686;MQ=71.28;MQ0=1;MQRankSum=-11.502;QD=22.95;ReadPosRankSum=0.822;VQSLOD=2.5908;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,138,2848	0/0:10,0:10:24.04:0,24,497	0/0:47,0:30:65.97:0,66,1175	0/0:41,0:29:75.42:0,75,1319	1/1:0,9:16:21.07:321,21,0	1/1:1,12:18:21.06:254,21,0	1/1:7,5:17:41.82:497,42,0	0/0:30,0:30:90.31:0,90,1969	1/1:0,9:19:48.15:594,48,0	1/1:6,0:10:24.08:337,24,0	1/1:0,10:14:13.59:177,14,0	0/0:25,0:25:72.10:0,72,1618	0/0:24,0:24:68.97:0,69,1461	1/1:1,9:16:33.06:380,33,0	0/0:22,0:22:63.22:0,63,1384	0/0:10,0:10:30.10:0,30,688	0/0:40,0:40:99:0,117,2467	0/0:17,0:17:27.89:0,28,916	1/1:8,0:12:36.09:463,36,0	1/1:0,8:11:9.03:124,9,0	1/1:19,3:26:40.57:457,41,0	0/0:20,0:20:51.62:0,52,1083	0/0:22,0:22:59.11:0,59,1242	0/0:43,0:43:99:0,120,2604	1/1:0,11:14:12.04:151,12,0	1/1:1,11:19:48.15:613,48,0	1/1:0,8:17:36.58:442,37,0	1/1:0,0:2:6.02:78,6,0
chr10	53429007	.	C	CTG	15888.22	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=5.022;DP=574;FS=0.306;HRun=0;HaplotypeScore=80.5156;InbreedingCoeff=0.9956;MQ=90.85;MQ0=0;MQRankSum=-4.217;QD=56.14;ReadPosRankSum=2.262;VQSLOD=5.2273;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:96.27:0,96,1489	0/0:5,0:5:15.05:0,15,245	0/0:23,0:23:66.22:0,66,1059	0/0:29,0:29:78.25:0,78,1244	1/1:1,27:28:69.24:1401,69,0	1/1:0,23:25:69.24:1402,69,0	1/1:0,12:12:33.11:670,33,0	0/0:29,0:28:84.29:0,84,1366	1/1:0,19:19:54.19:1096,54,0	1/1:0,28:29:87.29:1733,87,0	1/1:0,23:23:63.22:1279,63,0	0/0:16,0:16:48.15:0,48,759	0/0:16,0:16:48.15:0,48,757	1/1:0,17:17:45.15:914,45,0	0/0:25,0:25:75.23:0,75,1198	0/0:17,0:17:51.17:0,51,826	0/0:29,0:29:87.25:0,87,1390	0/0:14,0:14:42.14:0,42,684	1/1:2,16:18:54.18:1053,54,0	1/1:1,23:24:60.21:1219,60,0	1/1:0,18:19:48.16:975,48,0	0/0:23,0:23:66.23:0,66,1073	0/0:21,0:21:63.22:0,63,1024	0/0:12,0:12:36.12:0,36,586	1/1:0,16:16:48.16:975,48,0	1/1:0,29:29:87.30:1768,87,0	1/1:0,18:19:54.19:1097,54,0	1/1:0,5:5:15.05:305,15,0
chr10	53429133	.	A	AT	8557.41	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=-5.783;DP=520;FS=0.000;HRun=8;HaplotypeScore=60.0313;InbreedingCoeff=0.9423;MQ=70.25;MQ0=0;MQRankSum=-2.327;QD=28.81;ReadPosRankSum=-0.681;VQSLOD=4.8545;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,99,906	0/0:10,0:10:30.02:0,30,274	0/0:12,0:11:24:0,24,214	0/1:7,0:6:5.90:6,0,19	1/1:8,20:28:60.08:653,60,0	1/1:2,18:20:57.16:649,57,0	1/1:5,11:16:39.12:450,39,0	0/0:22,0:22:51.01:0,51,467	1/1:0,15:15:45.13:519,45,0	1/1:2,18:20:57.17:650,57,0	1/1:2,25:27:66.19:757,66,0	0/0:16,0:16:45.01:0,45,407	0/0:10,0:10:24.01:0,24,219	1/1:4,17:21:57.16:645,57,0	0/0:18,0:18:54.03:0,54,494	0/0:11,0:11:33.02:0,33,302	0/0:17,0:17:42.01:0,42,384	0/0:15,0:15:39.02:0,39,357	1/1:7,18:25:63.17:716,63,0	1/1:5,26:31:78.19:883,78,0	1/1:0,8:8:21.06:242,21,0	0/0:23,0:23:63.03:0,63,576	0/0:17,0:17:48.03:0,48,439	0/0:17,0:17:51.01:0,51,461	1/1:4,18:22:60.18:686,60,0	1/1:4,21:25:69.20:788,69,0	1/1:6,16:22:51.15:588,51,0	1/1:2,8:10:30.06:324,30,0
chr10	53429199	.	T	TA	10283.12	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=17.065;DP=542;FS=1.075;HRun=6;HaplotypeScore=92.5250;InbreedingCoeff=0.9969;MQ=67.14;MQ0=0;MQRankSum=-2.889;QD=32.13;ReadPosRankSum=1.317;VQSLOD=4.7422;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:69.16:0,69,704	0/0:13,0:13:30.06:0,30,306	0/0:12,0:12:30.05:0,30,299	0/0:8,0:6:15.03:0,15,149	1/1:3,27:30:78.22:948,78,0	1/1:2,16:18:45.14:549,45,0	1/1:2,19:21:54.17:663,54,0	0/0:21,0:21:54.11:0,54,546	1/1:1,15:16:48.15:590,48,0	1/1:5,31:36:90.28:1115,90,0	1/1:4,17:21:54.16:654,54,0	0/0:15,0:15:39.09:0,39,398	0/0:17,0:17:48.11:0,48,489	1/1:5,15:20:57.14:665,57,0	0/0:14,0:14:42.10:0,42,429	0/0:14,0:14:39.09:0,39,398	0/0:15,0:15:42.09:0,42,428	0/0:8,0:8:21.05:0,21,214	1/1:5,15:20:57.17:691,57,0	1/1:5,21:26:66.19:799,66,0	1/1:2,9:11:27.08:334,27,0	0/0:27,0:27:72.16:0,72,734	0/0:14,0:14:42.08:0,42,421	0/0:19,0:19:45.10:0,45,459	1/1:4,22:26:69.20:832,69,0	1/1:4,24:28:76.12:930,76,0	1/1:7,22:29:75.23:918,75,0	1/1:1,16:17:48.15:594,48,0
chr10	53435818	.	GGAACCCAGAGGCCTTATACA	G	2536.41	PASS	AC=12;AF=0.353;AN=34;BaseQRankSum=6.366;DP=491;FS=30.977;HRun=0;HaplotypeScore=116.9108;InbreedingCoeff=0.7980;MQ=25.18;MQ0=174;MQRankSum=-3.549;QD=26.42;ReadPosRankSum=2.786;VQSLOD=0.4396;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:21:36.12:0,36,2477	0/0:14,0:3:9.03:0,9,449	./.	./.	./.	1/1:7,5:6:9.03:507,9,0	./.	0/0:26,0:7:18.06:0,18,1577	1/1:5,12:12:15.05:858,15,0	./.	./.	0/0:31,0:24:67.11:0,67,5383	0/0:25,0:21:54.17:0,54,4332	1/1:5,6:8:12.04:687,12,0	0/0:13,0:11:30.10:0,30,2599	0/0:18,0:14:33.11:0,33,2726	0/0:28,0:22:45.41:0,45,3754	0/0:23,0:16:36.12:0,36,3020	./.	./.	1/1:23,1:1:3.01:108,3,0	0/0:24,0:1:3.01:0,3,152	./.	0/0:18,0:15:27.09:0,27,1718	./.	1/1:18,1:1:3.01:172,3,0	1/1:11,2:4:6.02:343,6,0	./.
chr10	53436540	.	G	GA	10785.20	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=17.529;DP=601;FS=0.000;HRun=3;HaplotypeScore=91.2046;InbreedingCoeff=0.9993;MQ=76.34;MQ0=0;MQRankSum=-3.953;QD=33.81;ReadPosRankSum=-0.543;VQSLOD=4.6793;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,102,1224	0/0:15,0:15:39.12:0,39,467	0/0:18,0:18:48.14:0,48,555	0/0:10,0:10:24.05:0,24,265	1/1:5,41:45:99:1301,99,0	1/1:0,17:17:48.15:631,48,0	1/1:0,15:15:33.11:444,33,0	0/0:22,0:22:63.18:0,63,747	1/1:1,21:22:60.20:805,60,0	1/1:1,35:36:99:1355,102,0	1/1:1,18:19:48.16:633,48,0	0/0:17,0:17:48.13:0,48,564	0/0:25,0:25:69.18:0,69,804	1/1:0,15:15:42.14:566,42,0	0/0:25,0:25:69.21:0,69,828	0/0:23,0:23:69.20:0,69,817	0/0:12,0:12:36.11:0,36,432	0/0:12,0:12:36.07:0,36,405	1/1:2,18:20:54.17:716,54,0	1/1:0,33:33:90.25:1180,90,0	1/1:2,13:15:33.11:445,33,0	0/0:24,0:24:57.06:0,57,671	0/0:29,0:29:81.24:0,81,959	0/0:14,0:14:42.13:0,42,502	1/1:1,20:21:48.16:650,48,0	1/1:4,20:24:60.20:810,60,0	1/1:2,26:27:72.19:926,72,0	1/1:0,8:8:24.08:324,24,0
chr10	53438192	.	C	CT	5210.12	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-11.408;DP=645;FS=2.931;HRun=8;HaplotypeScore=64.8748;InbreedingCoeff=0.9826;MQ=85.67;MQ0=0;MQRankSum=-0.137;QD=28.32;ReadPosRankSum=0.126;VQSLOD=5.2869;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:59.97:0,60,538	0/0:11,0:11:30.01:0,30,274	0/0:22,0:22:10.29:0,10,201	0/0:21,0:20:37.50:0,38,322	0/0:33,0:33:81.02:0,81,737	0/0:21,0:21:57.02:0,57,522	0/0:20,0:20:51.02:0,51,466	0/0:36,0:36:59.27:0,59,689	0/0:27,0:27:72.01:0,72,654	1/1:6,23:29:69.19:787,69,0	1/1:4,15:19:45.13:519,45,0	0/0:17,0:17:41.98:0,42,377	0/0:24,0:24:63.02:0,63,576	0/0:19,0:19:48:0,48,435	0/0:28,0:28:78.02:0,78,709	0/0:18,0:18:45.01:0,45,412	0/0:15,0:15:45.02:0,45,412	0/0:18,0:18:45.02:0,45,412	1/1:2,15:17:45.12:508,45,0	1/1:3,31:34:68.80:1031,69,0	1/1:4,14:18:36.11:415,36,0	0/0:25,0:25:72.04:0,72,659	0/0:33,0:33:84.03:0,84,768	0/0:23,0:23:66.03:0,66,604	0/0:27,0:27:75.42:0,75,706	1/1:1,30:31:87.22:980,87,0	1/1:7,26:32:75.22:865,75,0	1/1:0,3:3:9.03:104,9,0
chr10	53438579	.	GGGTGATT	G	13843.85	PASS	AB=0.538;AC=27;AF=0.482;AN=56;BaseQRankSum=15.790;DP=547;FS=6.691;HRun=0;HaplotypeScore=140.9558;InbreedingCoeff=0.9196;MQ=87.23;MQ0=0;MQRankSum=-15.103;QD=52.84;ReadPosRankSum=-0.602;VQSLOD=4.5209;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,132,5094	0/0:3,0:3:9.03:0,9,357	0/0:19,0:19:51.16:0,51,1753	0/0:26,0:26:68.69:0,69,2245	1/1:2,25:27:72.24:1559,72,0	1/1:1,10:11:24.08:615,24,0	1/1:3,15:18:42.14:1075,42,0	0/0:25,0:25:66.22:0,66,2273	0/1:3,18:21:82.41:786,0,82	1/1:3,20:23:63.22:1520,63,0	1/1:1,9:10:24.08:594,24,0	0/0:20,0:20:57.20:0,57,2107	0/0:17,0:17:51.17:0,51,1843	1/1:7,12:19:24.08:615,24,0	0/0:21,0:21:60.21:0,60,2321	0/0:19,0:19:51.18:0,51,1946	0/0:22,0:22:66.23:0,66,2523	0/0:14,0:14:42.14:0,42,1592	1/1:1,14:15:42.10:888,42,0	1/1:5,19:24:51.12:1226,51,0	1/1:9,18:27:29.94:740,30,0	0/0:16,0:16:48.16:0,48,1833	0/0:17,0:17:51.18:0,51,2001	0/0:21,0:21:54.19:0,54,2095	1/1:3,21:24:51.18:1305,51,0	1/1:0,14:14:39.11:925,39,0	1/1:1,16:17:45.15:1151,45,0	1/1:1,11:12:33.11:845,33,0
chr10	53438732	.	CAGAGAG	C	1478.51	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=6.246;DP=465;FS=3.754;HRun=0;HaplotypeScore=100.0926;InbreedingCoeff=0.7543;MQ=61.18;MQ0=12;MQRankSum=-6.254;QD=11.46;ReadPosRankSum=-0.107;VQSLOD=1.7895;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:25:48.64:0,49,1411	0/0:4,0:4:12.04:0,12,391	0/0:27,0:11:3.01:0,3,44	0/1:45,0:16:3.09:3,0,93	1/1:11,10:21:18.06:371,18,0	1/1:6,7:13:18.02:329,18,0	1/1:3,3:6:6.02:124,6,0	0/0:32,0:32:21.07:0,21,594	1/1:5,4:9:9.03:185,9,0	0/0:10,0:10:24.55:0,25,706	0/0:14,0:13:0:0,0,0	0/0:17,0:17:33.10:0,33,824	0/0:16,0:16:33.07:0,33,969	1/1:11,9:20:21.03:391,21,0	0/0:21,0:21:33.11:0,33,978	0/0:18,0:19:24.07:0,24,651	0/0:11,0:20:7.35:0,7,217	0/0:5,0:14:19.42:0,19,266	0/0:13,0:13:18.95:0,19,563	0/0:17,0:17:4.26:0,4,68	0/0:5,0:5:6.02:0,6,157	0/0:16,0:16:21.07:0,21,621	0/0:11,0:12:30.09:0,30,804	0/0:11,0:14:19.29:0,19,554	1/1:6,9:15:12.04:247,12,0	0/0:15,0:14:18.06:0,18,511	0/0:14,0:13:15.05:0,15,358	0/0:10,0:10:9.92:0,10,247
chr10	53440101	.	G	GGAGTCACT	31439.19	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=17.629;DP=590;FS=3.714;HRun=0;HaplotypeScore=188.5763;InbreedingCoeff=0.9906;MQ=77.43;MQ0=0;MQRankSum=-18.317;QD=102.41;ReadPosRankSum=-0.635;VQSLOD=5.4385;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,102,2783	0/0:9,0:9:27.06:0,27,691	0/0:19,0:19:57.19:0,57,1438	0/0:19,0:18:47.99:0,48,1120	1/1:14,19:33:60.21:2656,60,0	1/1:12,12:24:54.17:2166,54,0	1/1:9,8:17:39.13:1568,39,0	0/0:29,0:29:78.25:0,78,2051	1/1:9,14:23:66.21:2727,66,0	1/1:6,13:21:60.19:2441,60,0	1/1:5,16:22:45.15:1981,45,0	0/0:10,0:10:30.10:0,30,844	0/0:15,0:15:45.15:0,45,1292	1/1:4,17:21:63.20:2650,63,0	0/0:22,0:22:63.22:0,63,1775	0/0:18,0:18:51.18:0,51,1411	0/0:42,0:42:99:0,120,3251	0/0:9,0:9:27.09:0,27,722	1/1:12,6:23:66.19:2360,66,0	1/1:8,22:30:78.27:3421,78,0	1/1:5,1:7:9.03:401,9,0	0/0:23,0:23:69.24:0,69,1936	0/0:20,0:20:51.16:0,51,1403	0/0:14,0:14:42.14:0,42,1162	1/1:8,19:27:63.22:2806,63,0	1/1:10,10:21:54.19:2279,54,0	1/1:7,18:28:74.77:3227,75,0	1/1:5,3:10:18.06:756,18,0
chr10	53440135	.	TA	T	2860.49	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=10.379;DP=530;FS=0.000;HRun=8;HaplotypeScore=131.5023;InbreedingCoeff=0.9826;MQ=68.67;MQ0=0;MQRankSum=-5.253;QD=22.52;ReadPosRankSum=0.074;VQSLOD=2.0276;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:72.22:0,72,869	0/0:9,0:9:27.08:0,27,326	0/0:9,0:9:12.02:0,12,129	0/0:11,0:10:12.03:0,12,135	1/1:3,16:19:45.02:425,45,0	1/1:2,23:25:69.10:666,69,0	1/1:5,9:14:36.02:337,36,0	0/0:35,0:35:93.29:0,93,1123	1/1:3,22:25:63.09:607,63,0	0/0:20,0:20:59.37:0,59,429	0/0:23,0:23:50.99:0,51,406	0/0:10,0:10:27.08:0,27,326	0/0:15,0:15:45.12:0,45,531	1/1:1,16:17:48.08:463,48,0	0/0:18,0:18:39.12:0,39,471	0/0:15,0:15:39.10:0,39,450	0/0:39,0:39:99:0,102,1217	0/0:13,0:13:39.04:0,39,438	0/0:14,0:14:34.93:0,35,243	0/0:26,0:26:65.49:0,65,488	0/0:7,0:7:13.67:0,14,101	0/0:21,0:21:57.15:0,57,666	0/0:23,0:23:66.20:0,66,797	0/0:15,0:15:45.14:0,45,543	1/1:5,22:27:57.08:550,57,0	0/0:18,0:18:42.07:0,42,308	0/0:26,0:26:65.22:0,65,502	0/0:10,0:10:29.80:0,30,234
chr10	53440793	.	C	CA	1413.55	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-3.780;DP=613;FS=17.361;HRun=7;HaplotypeScore=57.2906;InbreedingCoeff=0.9528;MQ=66.73;MQ0=0;MQRankSum=-2.753;QD=25.70;ReadPosRankSum=-3.450;VQSLOD=1.3796;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:63.10:0,63,608	0/0:14,0:14:39.06:0,39,376	0/0:8,0:8:17.02:0,17,144	0/0:4,0:4:5.87:0,6,44	0/0:33,0:33:78.12:0,78,753	0/0:22,0:22:60.08:0,60,573	0/0:20,0:20:54.08:0,54,522	1/1:3,27:30:75.16:866,75,0	0/0:11,0:11:30.05:0,30,290	0/0:30,0:30:78.12:0,78,753	0/0:26,0:26:72.09:0,72,688	0/0:20,0:20:54.05:0,54,509	0/0:19,0:19:54.08:0,54,521	0/0:26,0:26:72.11:0,72,695	0/0:27,0:27:72.11:0,72,695	0/0:21,0:21:48.07:0,48,463	1/1:4,14:18:42.13:507,42,0	1/1:1,6:7:15.05:181,15,0	0/0:31,0:31:75.11:0,75,724	0/0:35,0:35:99:0,102,985	0/0:11,0:11:24.02:0,24,225	0/0:19,0:19:54.09:0,54,521	0/0:34,0:34:90.14:0,90,868	0/0:16,0:16:48.08:0,48,463	0/0:26,0:26:63.09:0,63,608	0/0:24,0:24:66.09:0,66,632	0/0:40,0:40:99:0,108,1043	0/0:18,0:18:48.08:0,48,463
chr10	53440836	.	TA	T	237.82	PASS	AB=0.858;AC=6;AF=0.107;AN=56;BaseQRankSum=6.799;DP=602;FS=0.000;HRun=10;HaplotypeScore=64.7857;InbreedingCoeff=0.6284;MQ=69.37;MQ0=0;MQRankSum=-1.487;QD=5.80;ReadPosRankSum=-0.355;VQSLOD=0.8352;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:63.13:0,63,676	0/0:5,0:5:12.03:0,12,133	0/0:17,1:18:10.02:0,10,285	0/1:4,1:5:2.20:2,0,26	0/0:30,1:31:67.16:0,67,944	0/0:25,0:25:72.19:0,72,788	0/1:13,2:15:25.04:25,0,205	0/0:23,1:24:22.09:0,22,464	0/0:15,0:15:39.11:0,39,431	0/0:29,0:29:66.17:0,66,722	0/0:35,0:35:84.20:0,84,908	0/0:22,0:22:60.12:0,60,632	0/0:16,1:17:25.43:0,25,504	0/0:34,0:34:80.22:0,80,849	0/0:32,1:33:67.18:0,67,955	0/0:20,0:20:60.15:0,60,648	1/1:6,11:17:29.94:257,30,0	1/1:1,3:4:9:78,9,0	0/0:25,0:25:51.14:0,51,562	0/0:32,0:32:69.18:0,69,756	0/0:12,0:12:30.08:0,30,331	0/0:20,0:21:56.98:0,57,604	0/0:25,1:26:40.12:0,40,669	0/0:18,1:19:28.09:0,28,538	0/0:17,0:17:45.07:0,45,471	0/0:26,0:26:75.20:0,75,829	0/0:32,0:32:93.22:0,93,1006	0/0:19,0:19:54.15:0,54,597
chr10	53441462	.	CA	C	1148.45	PASS	AC=6;AF=0.200;AN=30;BaseQRankSum=4.166;DP=150;FS=17.755;HRun=9;HaplotypeScore=29.5397;InbreedingCoeff=0.6816;MQ=48.86;MQ0=26;MQRankSum=-3.154;QD=19.80;ReadPosRankSum=-1.957;VQSLOD=1.6259;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:16:33.09:0,33,375	0/0:2,0:2:3.01:0,3,31	0/0:11,0:3:5.05:0,5,41	0/0:8,0:4:4.09:0,4,17	./.	./.	./.	1/1:3,26:29:73.95:664,74,0	./.	./.	./.	0/0:4,0:4:9.03:0,9,104	0/0:4,0:4:9.03:0,9,104	./.	0/0:7,0:6:11.52:0,12,113	0/0:7,0:7:18.05:0,18,207	1/1:3,16:18:48.02:438,48,0	1/1:3,6:6:18.01:165,18,0	./.	./.	./.	0/0:3,0:3:3.01:0,3,34	0/0:5,0:5:12.03:0,12,138	0/0:7,0:6:12.03:0,12,135	./.	./.	0/0:1,0:1:0:0,0,0	./.
chr10	53441501	.	T	TA	978.39	PASS	AC=6;AF=0.214;AN=28;BaseQRankSum=0.984;DP=154;FS=5.636;HRun=9;HaplotypeScore=46.9345;InbreedingCoeff=0.9071;MQ=85.01;MQ0=2;MQRankSum=-2.659;QD=18.82;ReadPosRankSum=1.645;VQSLOD=3.8268;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:47.92:0,48,406	0/0:4,0:4:11.99:0,12,102	0/0:12,0:9:11.95:0,12,96	0/0:12,0:8:14.98:0,15,126	./.	./.	./.	1/1:11,17:28:54.12:581,54,0	./.	./.	./.	0/0:4,0:4:9:0,9,78	0/0:5,0:6:17.03:0,17,136	./.	0/0:11,0:11:26.99:0,27,234	0/0:15,0:15:38.96:0,39,333	1/1:6,11:17:33.09:365,33,0	1/1:2,5:7:15.01:153,15,0	./.	./.	./.	0/0:7,0:7:17.93:0,18,143	0/0:7,0:7:17.98:0,18,152	0/0:6,0:6:9:0,9,78	./.	./.	./.	./.
chr10	53442410	.	T	TTGTG	19630.26	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-15.418;DP=800;FS=13.391;HRun=0;HaplotypeScore=121.7882;InbreedingCoeff=0.9991;MQ=68.14;MQ0=1;MQRankSum=-0.908;QD=47.76;ReadPosRankSum=1.883;VQSLOD=5.3824;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:32:75.24:0,75,1206	0/0:8,0:10:27.08:0,27,409	0/0:31,0:28:36.41:0,36,515	0/0:16,0:14:21.06:0,21,353	1/1:7,22:29:54.19:1321,54,0	1/1:12,18:31:50.91:1177,51,0	1/1:11,16:32:56.40:1164,56,0	0/0:28,0:28:54.18:0,54,879	1/1:5,24:32:66.70:1611,67,0	1/1:15,20:37:72.22:1650,72,0	1/1:8,20:28:60.21:1463,60,0	0/0:30,0:30:78.24:0,78,1252	0/0:35,0:35:96.33:0,96,1600	1/1:8,20:28:57.20:1410,57,0	0/0:37,0:39:99:0,99,1618	0/0:29,0:29:75.22:0,75,1201	0/0:26,0:26:38.23:0,38,979	0/0:29,0:28:60.18:0,60,969	1/1:7,11:18:35.86:800,36,0	1/1:10,26:36:80.75:1914,81,0	1/1:9,21:33:56.66:1290,57,0	0/0:26,0:26:69.22:0,69,1134	0/0:28,0:28:69.23:0,69,1155	0/0:30,0:30:81.23:0,81,1330	1/1:7,22:33:71.98:1719,72,0	1/1:7,28:35:84.29:2047,84,0	1/1:5,17:23:59.94:1395,60,0	1/1:4,9:13:27.09:669,27,0
chr10	53443929	.	G	GT	5007.88	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=15.932;DP=616;FS=0.752;HRun=3;HaplotypeScore=76.3175;InbreedingCoeff=0.9916;MQ=90.46;MQ0=0;MQRankSum=-3.580;QD=35.77;ReadPosRankSum=2.833;VQSLOD=5.4817;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:63.18:0,63,745	0/0:11,0:11:30.09:0,30,360	0/0:27,0:26:78.16:0,78,868	0/0:22,0:22:17.23:0,17,575	1/1:2,29:31:78.19:1047,78,0	1/1:0,28:28:69.23:947,69,0	1/1:0,10:10:27.09:367,27,0	0/0:39,0:39:99:0,111,1303	1/1:1,17:18:12.20:583,12,0	0/0:27,0:27:68.22:0,68,848	0/0:23,0:23:69.19:0,69,804	0/0:21,0:21:63.19:0,63,755	0/0:19,0:19:57.17:0,57,683	1/1:1,22:23:66.22:908,66,0	0/0:33,0:33:99:0,99,1176	0/0:17,0:17:48.15:0,48,573	0/0:17,0:17:48.15:0,48,576	0/0:14,0:14:39.12:0,39,467	0/0:27,0:27:75.23:0,75,899	0/0:30,0:30:87.25:0,87,1031	0/0:13,0:13:36.09:0,36,418	0/0:15,0:15:42.10:0,42,480	0/0:21,0:21:63.16:0,63,731	0/0:15,0:15:42.12:0,42,494	1/1:1,29:30:84.28:1156,84,0	0/0:26,0:26:78.23:0,78,926	0/0:21,0:21:60.18:0,60,719	0/0:16,0:16:48.15:0,48,576
chr10	53444429	.	TAGA	T	5963.19	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=13.069;DP=711;FS=3.129;HRun=0;HaplotypeScore=125.5561;InbreedingCoeff=0.9768;MQ=81.00;MQ0=0;MQRankSum=-4.121;QD=41.70;ReadPosRankSum=3.352;VQSLOD=6.4987;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:72.25:0,72,1604	0/0:9,0:9:21.07:0,21,469	0/0:26,0:25:54.62:0,55,1432	0/0:15,0:15:7.75:0,8,616	1/1:2,20:22:45.15:729,45,0	1/1:4,29:33:87.30:1418,87,0	1/1:1,19:20:54.18:879,54,0	0/0:32,0:32:90.29:0,90,1890	1/1:2,22:24:60.20:979,60,0	0/0:40,0:40:99:0,117,2616	0/0:15,0:15:45.15:0,45,1005	0/0:29,0:29:78.27:0,78,1741	0/0:31,0:31:90.31:0,90,2009	1/1:0,21:21:57.19:931,57,0	0/0:21,0:21:60.16:0,60,1290	0/0:21,1:22:11.28:0,11,1224	0/0:23,0:23:69.24:0,69,1520	0/0:28,0:28:81.28:0,81,1779	0/0:28,0:28:78.24:0,78,1649	0/0:44,0:44:99:0,123,2699	0/0:32,0:32:96.33:0,96,2114	0/0:28,0:28:81.28:0,81,1788	0/0:25,0:25:72.25:0,72,1591	0/0:17,0:17:51.17:0,51,1098	1/1:2,21:23:63.22:1028,63,0	0/0:26,0:26:72.25:0,72,1609	0/0:37,0:37:99:0,108,2378	0/0:12,0:12:36.12:0,36,800
chr10	53444778	.	T	TA	1603.75	PASS	AB=0.832;AC=17;AF=0.304;AN=56;BaseQRankSum=-2.416;DP=629;FS=2.900;HRun=13;HaplotypeScore=84.3128;InbreedingCoeff=0.6225;MQ=75.86;MQ0=0;MQRankSum=1.619;QD=6.60;ReadPosRankSum=-3.771;VQSLOD=1.9825;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,1:27:9.59:0,10,204	0/1:11,0:12:1.61:2,0,106	0/0:22,0:20:14.87:0,15,88	0/1:11,0:12:0.08:9,0,0	0/0:21,0:24:15.73:0,16,160	0/0:19,0:19:20.71:0,21,144	0/0:12,0:12:25.08:0,25,169	0/0:24,0:24:10.98:0,11,201	0/1:19,1:22:3.15:3,0,110	1/1:12,13:25:35.99:321,36,0	1/1:7,15:22:23.98:215,24,0	0/0:22,0:23:36.63:0,37,238	0/0:28,0:29:28.70:0,29,308	0/0:18,0:18:20.64:0,21,144	0/0:30,1:32:18.77:0,19,241	0/0:21,2:23:10.71:0,11,219	0/0:25,0:28:46.47:0,46,314	0/0:15,0:15:23.70:0,24,164	1/1:15,9:24:16.61:258,17,0	0/1:12,24:38:9.47:297,0,9	1/1:3,8:11:1.77:74,2,0	0/0:25,0:26:27.64:0,28,176	0/0:15,0:18:30.77:0,31,195	0/0:18,1:23:21.85:0,22,259	0/0:22,0:23:36.68:0,37,238	1/1:12,10:23:23.82:196,24,0	0/1:11,20:31:27.17:190,0,27	1/1:5,18:23:25.79:222,26,0
chr10	53445466	.	TA	T	7094.53	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=19.729;DP=755;FS=4.905;HRun=1;HaplotypeScore=93.2377;InbreedingCoeff=1.0000;MQ=88.42;MQ0=0;MQRankSum=-2.168;QD=32.85;ReadPosRankSum=1.028;VQSLOD=4.5208;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:46:99:0,138,2144	0/0:14,0:14:42.14:0,42,671	0/0:26,0:26:51.17:0,51,980	0/0:30,0:30:46.07:0,46,1050	0/0:36,0:36:99:0,108,1629	0/0:23,0:23:69.22:0,69,1079	0/0:18,0:18:54.17:0,54,838	0/0:34,0:34:96.28:0,96,1438	0/0:25,0:25:75.24:0,75,1174	1/1:0,25:25:75.21:866,75,0	1/1:0,20:20:57.17:665,57,0	0/0:25,0:25:75.22:0,75,1144	0/0:22,0:22:66.19:0,66,1022	0/0:22,0:22:66.22:0,66,1039	0/0:32,0:32:96.31:0,96,1510	0/0:31,0:31:93.28:0,93,1405	0/0:30,0:30:90.29:0,90,1412	0/0:13,0:13:39.13:0,39,623	1/1:2,20:22:60.16:689,60,0	1/1:0,32:32:96.29:1121,96,0	1/1:1,31:32:93.28:1085,93,0	0/0:28,0:28:84.29:0,84,1324	0/0:24,0:24:72.23:0,72,1126	0/0:29,0:29:87.23:0,87,1289	0/0:30,0:30:90.28:0,90,1373	1/1:24,0:24:69.16:790,69,0	1/1:4,44:48:99:1459,126,0	1/1:1,12:13:36.11:420,36,0
chr10	53445467	.	AC	A	7110.47	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=19.891;DP=759;FS=4.410;HRun=4;HaplotypeScore=93.7505;InbreedingCoeff=0.9999;MQ=86.90;MQ0=0;MQRankSum=-0.472;QD=32.62;ReadPosRankSum=-0.062;VQSLOD=4.9500;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:47:99:0,141,1937	0/0:14,0:14:42.14:0,42,587	0/0:23,0:23:30.29:0,30,727	0/0:30,0:30:38.35:0,38,905	0/0:35,0:35:99:0,102,1408	0/0:24,0:24:66.22:0,66,923	0/0:18,0:18:54.18:0,54,755	0/0:35,0:35:87.28:0,87,1203	0/0:25,0:25:72.24:0,72,1008	1/1:27,0:27:75.21:866,75,0	1/1:20,0:20:57.17:665,57,0	0/0:25,0:25:72.23:0,72,988	0/0:23,0:23:66.21:0,66,906	0/0:22,0:22:66.22:0,66,919	0/0:31,0:31:93.31:0,93,1302	0/0:31,0:31:90.30:0,90,1255	0/0:31,0:31:90.29:0,90,1241	0/0:14,0:14:39.13:0,39,546	1/1:22,0:22:60.16:689,60,0	1/1:32,0:32:96.29:1121,96,0	1/1:33,0:33:93.28:1085,93,0	0/0:29,0:29:84.28:0,84,1176	0/0:24,0:24:72.24:0,72,1006	0/0:29,0:29:78.22:0,78,1069	0/0:30,0:30:84.27:0,84,1160	1/1:1,23:24:69.21:806,69,0	1/1:47,0:47:99:1459,126,0	1/1:13,0:13:36.11:420,36,0
chr10	53445970	.	G	GTA	13749.78	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-16.436;DP=924;FS=1.488;HRun=0;HaplotypeScore=100.2838;InbreedingCoeff=1.0000;MQ=83.06;MQ0=2;MQRankSum=-3.908;QD=50.18;ReadPosRankSum=1.700;VQSLOD=5.6701;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:58:99:0,172,2420	0/0:17,0:17:48.16:0,48,707	0/0:35,0:35:81.35:0,81,1267	0/0:35,0:35:96.28:0,96,1372	0/0:47,0:47:99:0,132,1883	0/0:26,0:26:78.24:0,78,1109	0/0:26,0:26:78.24:0,78,1109	0/0:44,0:44:97.63:0,98,1706	0/0:36,0:36:99:0,108,1588	1/1:2,31:36:99:1804,102,0	1/1:1,27:29:81.28:1494,81,0	0/0:37,0:37:99:0,108,1572	0/0:35,0:35:99:0,105,1538	0/0:26,0:26:75.24:0,75,1085	0/0:28,0:28:75.25:0,75,1103	0/0:38,0:38:99:0,105,1527	0/0:40,0:40:99:0,117,1664	0/0:18,0:18:48.16:0,48,706	1/1:1,23:25:72.23:1300,72,0	1/1:0,41:41:99:2095,117,0	1/1:3,37:41:99:1937,105,0	0/0:24,0:24:69.22:0,69,998	0/0:26,0:26:75.24:0,75,1084	0/0:21,0:21:60.20:0,60,884	0/0:33,0:33:93.31:0,93,1369	1/1:0,40:38:99:2077,114,0	1/1:3,44:49:99:2370,129,0	1/1:1,12:13:36.12:673,36,0
chr10	53449815	.	A	ACGACTC	3131.51	PASS	AB=0.667;AC=5;AF=0.089;AN=56;BaseQRankSum=-3.099;DP=624;FS=2.259;HRun=0;HaplotypeScore=139.1819;InbreedingCoeff=0.7728;MQ=80.14;MQ0=0;MQRankSum=-8.632;QD=49.71;ReadPosRankSum=-2.649;VQSLOD=3.2123;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,132,2864	0/0:10,0:10:21.07:0,21,463	0/0:25,0:25:54.18:0,54,1125	0/0:12,0:12:30.10:0,30,663	0/0:20,0:20:48.16:0,48,1068	0/0:22,0:22:51.16:0,51,1096	0/0:24,0:24:57.18:0,57,1214	1/1:17,5:23:33.10:964,33,0	0/0:22,0:22:54.17:0,54,1161	0/0:14,0:14:36.12:0,36,793	0/0:14,0:14:42.13:0,42,868	0/0:35,0:35:90.30:0,90,1952	0/0:30,0:30:75.26:0,75,1638	0/0:31,0:31:72.25:0,72,1592	0/0:43,0:43:99:0,117,2564	0/0:28,0:28:75.26:0,75,1675	1/1:11,13:26:45.15:1519,45,0	0/1:7,5:14:39.83:778,0,40	0/0:16,0:16:39.13:0,39,822	0/0:16,0:16:36.09:0,36,706	0/0:26,0:26:72.21:0,72,1520	0/0:15,0:15:39.13:0,39,828	0/0:11,0:11:27.09:0,27,597	0/0:32,0:32:93.30:0,93,1995	0/0:18,0:18:51.18:0,51,1139	0/0:23,0:23:63.22:0,63,1383	0/0:18,0:18:51.15:0,51,1095	0/0:5,0:5:15.05:0,15,335
chr10	53451388	.	CA	C	6726.37	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=12.837;DP=701;FS=1.888;HRun=2;HaplotypeScore=66.7517;InbreedingCoeff=0.9993;MQ=63.69;MQ0=0;MQRankSum=0.811;QD=37.79;ReadPosRankSum=0.750;VQSLOD=5.4702;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:96.31:0,96,1502	0/0:16,0:16:48.16:0,48,765	0/0:28,0:23:69.19:0,69,1076	0/0:21,0:18:51.12:0,51,755	0/0:19,0:19:57.19:0,57,909	0/0:18,0:18:51.16:0,51,791	0/0:21,0:21:60.17:0,60,910	0/0:41,0:41:99:0,117,1844	0/0:29,0:29:87.30:0,87,1391	1/1:0,20:20:57.19:790,57,0	1/1:0,15:15:39.13:527,39,0	0/0:26,0:26:78.23:0,78,1192	0/0:29,0:29:87.28:0,87,1360	0/0:24,0:24:69.23:0,69,1094	0/0:31,0:31:90.31:0,90,1439	0/0:32,0:32:96.30:0,96,1490	0/0:34,0:34:99:0,102,1595	0/0:25,0:25:72.25:0,72,1151	1/1:0,20:20:54.18:755,54,0	1/1:0,28:28:75.24:1025,75,0	1/1:0,31:31:87.29:1215,87,0	0/0:29,0:29:87.30:0,87,1386	0/0:25,0:25:75.24:0,75,1173	0/0:27,0:27:81.22:0,81,1232	0/0:13,0:13:39.13:0,39,624	1/1:0,25:25:75.25:1036,75,0	1/1:0,31:31:78.26:1086,78,0	1/1:0,8:8:21.07:294,21,0
chr10	53452034	.	CAG	C	1197.28	PASS	AB=0.914;AC=22;AF=0.440;AN=50;BaseQRankSum=6.873;DP=682;FS=2.581;HRun=0;HaplotypeScore=134.2280;InbreedingCoeff=-0.0129;MQ=65.53;MQ0=12;MQRankSum=-1.058;QD=2.70;ReadPosRankSum=2.062;VQSLOD=2.5063;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:45,1:43:10.31:10,0,543	0/1:5,1:6:21.33:21,0,124	./.	./.	./.	1/1:22,12:35:24.05:257,24,0	1/1:18,9:29:11.99:120,12,0	0/1:23,1:21:3.30:27,0,3	0/1:9,10:19:21.66:188,0,22	0/1:26,0:26:9.60:10,0,77	0/0:19,0:18:6.46:0,6,50	0/1:17,5:22:90.85:91,0,393	0/1:31,2:33:15.56:16,0,597	1/1:14,7:21:9.02:100,9,0	0/1:29,2:32:11.41:11,0,377	0/0:22,3:24:2.44:0,2,534	0/1:23,0:27:2.34:97,0,2	1/1:17,1:19:31.07:195,31,0	0/0:13,0:12:10.36:0,10,116	0/1:20,0:22:11.75:12,0,63	0/0:21,0:17:5.96:0,6,45	0/1:25,1:25:27.42:27,0,453	0/0:22,0:22:17.47:0,17,271	0/0:36,1:33:5.75:0,6,506	1/1:11,7:19:8.94:84,9,0	0/1:34,0:34:88.75:89,0,118	0/0:30,0:29:25.53:0,26,159	0/0:3,0:3:0.47:0,0,1
chr10	53452066	.	G	GAC	433.45	PASS	AB=0.971;AC=11;AF=0.220;AN=50;BaseQRankSum=2.560;DP=679;FS=7.822;HRun=0;HaplotypeScore=148.6523;InbreedingCoeff=0.0435;MQ=42.52;MQ0=47;MQRankSum=0.678;QD=2.19;ReadPosRankSum=-0.487;VQSLOD=1.9057;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:50,1:47:59.20:0,59,794	0/0:10,0:10:21:0,21,230	./.	./.	./.	0/1:22,0:19:0.49:0,0,14	0/1:17,0:14:3.72:4,0,4	0/0:43,0:30:49.19:0,49,331	0/1:16,0:14:40.53:41,0,44	0/0:32,0:31:56.61:0,57,460	0/1:18,0:17:5.13:5,0,39	0/0:31,0:27:47.29:0,47,695	0/0:26,0:25:65.81:0,66,804	0/1:17,0:14:1.94:2,0,7	0/0:25,0:25:36.07:0,36,598	0/0:34,0:32:55.40:0,55,832	0/1:25,3:27:99:167,0,139	0/1:17,4:19:99:265,0,140	0/1:18,0:15:10.67:11,0,159	0/1:28,0:25:4.98:5,0,154	0/0:22,0:15:8.97:0,9,71	0/0:29,0:28:53.51:0,54,644	0/0:26,0:26:33.02:0,33,404	0/0:51,0:45:71.75:0,72,819	1/1:13,0:12:5.81:59,6,0	0/0:41,0:38:35.02:0,35,557	0/0:35,0:29:34.32:0,34,323	0/0:9,0:5:4.71:0,5,27
chr10	53452070	.	GAC	G	1544.95	PASS	AB=0.958;AC=22;AF=0.440;AN=50;BaseQRankSum=11.327;DP=657;FS=2.440;HRun=0;HaplotypeScore=140.9440;InbreedingCoeff=0.4687;MQ=41.95;MQ0=48;MQRankSum=-3.447;QD=5.64;ReadPosRankSum=0.759;VQSLOD=3.2207;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:46:50.89:0,51,729	0/0:10,0:10:11.80:0,12,194	./.	./.	./.	1/1:21,0:18:18.54:79,19,0	1/1:17,0:14:2.18:18,2,0	0/0:49,0:37:7.85:0,8,414	0/1:15,0:13:34.56:52,0,35	1/1:30,2:31:66.19:501,66,0	1/1:18,0:16:5.97:46,6,0	0/0:31,0:27:8.09:0,8,596	0/0:27,0:25:43.59:0,44,873	1/1:15,0:12:6.59:39,7,0	0/0:23,0:23:43.38:0,43,519	0/0:34,0:32:67.72:0,68,914	0/0:26,0:25:24.65:0,25,164	0/1:23,0:21:37.33:37,0,176	0/1:15,1:13:49.18:86,0,49	1/1:23,1:21:6.08:73,6,0	0/0:21,0:13:0.47:0,0,1	0/0:28,0:27:15.20:0,15,600	0/0:23,0:23:8.60:0,9,379	0/0:50,0:44:59.98:0,60,811	1/1:12,0:11:1.06:11,1,0	1/1:32,7:35:2.76:561,3,0	1/1:34,0:28:28.87:197,29,0	0/1:7,1:4:15.97:16,0,16
chr10	53452076	.	GAC	G	886.56	PASS	AB=0.961;AC=9;AF=0.180;AN=50;BaseQRankSum=8.731;DP=641;FS=4.234;HRun=0;HaplotypeScore=138.4354;InbreedingCoeff=0.4448;MQ=41.34;MQ0=46;MQRankSum=-6.827;QD=5.83;ReadPosRankSum=1.498;VQSLOD=3.2525;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:44:63:0,63,1042	0/0:10,0:10:21.07:0,21,342	./.	./.	./.	0/0:17,0:14:11.94:0,12,97	0/0:15,0:12:11.19:0,11,92	0/0:55,0:45:99:0,124,2004	0/0:16,0:14:21.33:0,21,175	0/1:29,1:29:8.66:306,0,9	1/1:15,1:14:2.99:24,3,0	0/0:28,0:24:64.66:0,65,1036	0/0:26,0:24:69.16:0,69,1161	0/0:15,0:12:11.62:0,12,82	0/0:23,0:23:60.14:0,60,940	0/0:35,0:33:84.17:0,84,1404	0/0:29,0:28:39.95:0,40,522	0/0:22,0:20:56.60:0,57,809	0/1:15,1:14:86.31:94,0,86	1/1:21,1:19:5.83:72,6,0	0/0:20,1:12:0.47:0,0,1	0/0:26,0:25:46.70:0,47,742	0/0:27,0:27:19.16:0,19,482	0/0:50,0:44:63.19:0,63,1121	0/0:10,0:10:5.99:0,6,53	0/1:36,1:33:99:392,0,193	1/1:31,0:25:22.98:135,23,0	0/0:7,0:3:3.01:0,3,57
chr10	53452082	.	GAC	G	580.23	PASS	AB=0.946;AC=12;AF=0.250;AN=48;BaseQRankSum=8.904;DP=647;FS=5.482;HRun=0;HaplotypeScore=136.7012;InbreedingCoeff=0.2425;MQ=40.88;MQ0=48;MQRankSum=-7.018;QD=2.96;ReadPosRankSum=3.061;VQSLOD=2.0605;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:43:45.44:0,45,1028	0/0:12,0:12:27.09:0,27,476	./.	./.	./.	0/1:14,0:11:3.83:4,0,12	0/1:15,0:12:2.38:2,0,58	0/0:61,0:50:99:0,141,2473	0/1:14,0:12:0.16:0,0,61	0/1:22,5:26:25.30:257,0,25	1/1:14,3:15:2.99:24,3,0	0/0:28,0:24:65.93:0,66,1102	0/0:29,0:27:72.20:0,72,1256	0/0:17,0:13:0.57:0,1,54	0/0:24,0:24:53.59:0,54,952	0/0:33,0:31:84.27:0,84,1532	0/0:32,0:31:34.06:0,34,474	0/0:26,0:24:68.84:0,69,1093	0/1:17,1:16:86.12:110,0,86	1/1:19,4:19:3.90:67,4,0	./.	0/0:26,0:25:45.10:0,45,771	0/0:23,0:23:24.08:0,24,418	0/0:47,0:41:69.13:0,69,1167	0/0:9,0:9:2.90:0,3,16	0/1:33,5:34:99:161,0,174	1/1:27,3:24:17:89,17,0	0/0:7,0:3:3.01:0,3,58
chr10	53452088	.	GAC	G	394.36	PASS	AB=0.945;AC=15;AF=0.326;AN=46;BaseQRankSum=9.023;DP=647;FS=7.067;HRun=0;HaplotypeScore=135.8992;InbreedingCoeff=0.3736;MQ=40.51;MQ0=51;MQRankSum=-5.216;QD=1.88;ReadPosRankSum=0.387;VQSLOD=1.7149;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:41:57.16:0,57,1004	0/0:14,0:14:14.12:0,14,501	./.	./.	./.	1/1:13,6:16:5.90:69,6,0	1/1:14,3:14:3.01:46,3,0	0/0:56,0:46:99:0,135,2365	0/1:10,5:13:8.65:57,0,9	0/1:23,0:22:45.37:45,0,113	./.	0/0:30,0:26:68.63:0,69,1094	0/0:29,0:27:78.14:0,78,1292	1/1:16,4:16:8.52:73,9,0	0/0:24,0:24:46.10:0,46,913	0/0:35,0:33:90.06:0,90,1564	0/0:30,0:29:29:0,29,433	0/0:26,0:23:44:0,44,1056	0/1:15,0:13:25.49:25,0,121	0/1:20,0:16:3.32:3,0,31	./.	0/0:26,0:25:50.92:0,51,827	0/0:22,0:22:24.08:0,24,459	0/0:44,1:39:69.20:0,69,1238	1/1:8,6:14:2.97:24,3,0	0/1:38,1:35:99:149,0,142	1/1:28,0:22:6.86:52,7,0	0/0:7,0:3:3.01:0,3,58
chr10	53452092	.	GAGAC	G	2292.06	PASS	AB=0.768;AC=10;AF=0.217;AN=46;BaseQRankSum=9.800;DP=655;FS=4.151;HRun=0;HaplotypeScore=139.8875;InbreedingCoeff=0.3923;MQ=40.62;MQ0=52;MQRankSum=-9.483;QD=14.98;ReadPosRankSum=1.211;VQSLOD=3.4472;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:42:54.13:0,54,1000	0/0:15,0:15:35.48:0,35,616	./.	./.	./.	0/0:18,0:15:0.89:0,1,3	1/1:16,0:13:1.07:3,1,0	0/0:60,0:50:99:0,141,2013	0/0:15,0:13:4.63:0,5,16	1/1:11,12:22:47.02:670,47,0	./.	0/0:29,0:25:56.22:0,56,1112	0/0:28,0:26:72.23:0,72,1326	0/0:20,0:16:3.52:0,4,10	0/0:25,0:25:62.21:0,62,975	0/0:41,0:38:96.11:0,96,1731	0/0:34,0:32:9.36:0,9,392	0/0:26,0:23:48.58:0,49,1008	0/1:11,5:14:50.38:337,0,50	1/1:10,9:15:5.20:32,5,0	./.	0/0:25,0:24:48.16:0,48,904	0/0:23,0:23:24.07:0,24,502	0/0:45,0:39:63.18:0,63,1163	0/1:14,0:14:0:0,0,0	0/1:18,19:33:66.94:1056,0,67	0/1:13,15:22:8.36:320,0,8	0/0:6,1:3:3.01:0,3,62
chr10	53452138	.	GAC	G	423.45	PASS	AB=0.972;AC=14;AF=0.269;AN=52;BaseQRankSum=8.793;DP=688;FS=0.000;HRun=0;HaplotypeScore=118.1369;InbreedingCoeff=0.1378;MQ=43.61;MQ0=52;MQRankSum=-3.589;QD=1.90;ReadPosRankSum=-2.592;VQSLOD=0.9335;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:46:79.23:0,79,1631	0/1:9,2:11:59.46:59,0,399	./.	./.	0/0:21,1:19:0:0,0,0	0/0:18,0:16:0:0,0,0	0/0:19,0:19:3:0,3,58	0/0:33,0:24:68.98:0,69,1109	0/1:17,0:15:26.50:27,0,48	0/1:21,0:16:89.41:127,0,89	1/1:7,1:5:2.60:10,3,0	0/0:31,0:27:72.14:0,72,1215	0/0:40,1:38:65.38:0,65,1845	0/0:24,1:21:2.69:0,3,57	0/0:41,0:38:99:0,105,1877	0/0:41,0:38:99:0,108,1954	0/1:45,1:43:3.29:3,0,254	0/0:26,0:23:7.31:0,7,779	0/1:18,1:12:51.63:52,0,218	0/0:24,0:21:0:0,0,1	1/1:21,0:13:2.71:17,3,0	0/0:23,0:23:57.11:0,57,929	0/0:25,0:24:8.85:0,9,74	0/0:49,0:43:74.84:0,75,1295	0/1:16,0:12:0.01:0,0,0	0/1:30,0:22:96.84:172,0,97	1/1:23,1:18:8.32:80,8,0	0/1:10,0:5:11.25:11,0,27
chr10	53452140	.	CAG	C	1006.72	PASS	AB=0.862;AC=15;AF=0.288;AN=52;BaseQRankSum=7.797;DP=684;FS=1.281;HRun=0;HaplotypeScore=113.5003;InbreedingCoeff=0.1519;MQ=44.15;MQ0=50;MQRankSum=-2.952;QD=4.19;ReadPosRankSum=-3.104;VQSLOD=2.2468;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:46:85.86:0,86,1510	0/1:12,0:12:19.82:20,0,411	./.	./.	0/0:15,7:19:0:0,0,0	0/0:15,4:17:0:0,0,0	0/0:13,5:18:3:0,3,53	0/0:33,0:24:54.17:0,54,868	0/1:13,3:15:43.91:59,0,44	0/1:11,10:15:70.93:325,0,71	1/1:3,5:5:3:28,3,0	0/0:32,0:28:69.21:0,69,1133	0/0:43,0:40:86.55:0,87,1810	0/0:19,6:21:2.69:0,3,53	0/0:41,0:38:99:0,105,1818	0/0:41,0:38:99:0,105,1812	0/1:44,1:43:4.72:5,0,237	0/0:26,0:23:6.06:0,6,699	0/1:17,1:11:74.50:74,0,187	0/0:9,14:20:0:0,0,1	1/1:11,9:12:2.79:41,3,0	0/0:24,0:24:57.18:0,57,947	0/1:23,0:23:0:0,0,0	0/0:49,0:43:65.98:0,66,1151	0/1:12,4:12:0.01:0,0,0	0/1:12,16:20:50.76:490,0,51	1/1:16,7:17:6.98:63,7,0	0/1:8,1:5:6.04:34,0,6
chr10	53452148	.	CAGAGACAGAGACAG	C	1537.64	PASS	AB=1.000;AC=11;AF=0.212;AN=52;BaseQRankSum=3.547;DP=714;FS=16.621;HRun=0;HaplotypeScore=217.4120;InbreedingCoeff=0.4265;MQ=45.46;MQ0=49;MQRankSum=-5.952;QD=8.27;ReadPosRankSum=-2.920;VQSLOD=1.0976;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:43:64.44:0,64,3147	0/0:11,0:11:27.09:0,27,957	./.	./.	1/1:24,0:22:0.37:1,0,0	0/0:25,0:23:1.72:0,2,3	0/1:19,0:19:2.49:2,0,22	1/1:33,0:23:29.96:329,30,0	0/1:16,0:15:4.65:53,0,5	0/0:23,0:17:15.42:0,15,385	0/0:10,0:7:6.02:0,6,127	0/0:31,0:28:57.20:0,57,2265	0/0:42,0:40:99:0,105,4106	0/0:31,0:27:7.57:0,8,73	0/0:43,0:40:93.32:0,93,3390	0/0:41,0:39:99:0,99,3349	1/1:15,29:42:2.34:335,2,0	0/1:28,0:25:43.41:937,0,43	0/0:17,0:10:20.97:0,21,418	0/0:26,0:23:14.76:0,15,353	0/0:24,0:15:2.67:0,3,62	0/0:24,0:24:39.13:0,39,1457	0/0:20,0:20:0:0,0,0	0/0:47,0:43:56:0,56,2015	1/1:22,0:18:1.41:3,1,0	0/0:32,0:24:49.69:0,50,925	0/0:25,0:18:18.43:0,18,454	0/0:8,0:5:3.01:0,3,68
chr10	53452152	.	GAC	G	110.79	PASS	AB=0.801;AC=6;AF=0.115;AN=52;BaseQRankSum=4.798;DP=714;FS=10.762;HRun=0;HaplotypeScore=125.8440;InbreedingCoeff=0.2233;MQ=45.68;MQ0=53;MQRankSum=-3.477;QD=0.80;ReadPosRankSum=-2.770;VQSLOD=0.9856;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:49,1:45:83.89:0,84,1674	0/0:12,0:12:36.08:0,36,577	./.	./.	0/1:9,13:20:0:0,0,0	0/0:11,14:24:0:0,0,0	0/0:14,5:19:6.07:0,6,68	0/0:35,0:23:62.30:0,62,843	0/1:14,3:16:43.06:139,0,43	0/1:26,0:19:9.51:10,0,471	0/0:12,0:8:8.97:0,9,92	0/0:31,0:28:72.22:0,72,1299	0/0:39,0:38:99:0,111,2075	0/1:14,18:28:48.57:55,0,49	0/0:42,0:39:99:0,108,2007	0/0:38,0:36:99:0,108,2035	0/0:43,1:42:24.36:0,24,209	0/0:27,0:24:20.95:0,21,668	0/0:18,0:10:23.99:0,24,328	0/0:25,0:22:18.04:0,18,302	0/0:25,0:16:2.64:0,3,32	0/0:25,0:25:57.17:0,57,1011	0/1:20,0:20:0:0,0,0	0/0:45,1:42:71.98:0,72,1311	0/1:12,10:18:0.01:0,0,0	0/0:31,0:23:55.47:0,55,666	0/0:24,0:17:23.84:0,24,316	0/0:6,0:4:5.60:0,6,42
chr10	53452154	.	C	CAGAG	285.87	PASS	AB=0.974;AC=10;AF=0.192;AN=52;BaseQRankSum=5.269;DP=724;FS=1.922;HRun=0;HaplotypeScore=147.4403;InbreedingCoeff=0.1557;MQ=45.86;MQ0=52;MQRankSum=-3.986;QD=1.25;ReadPosRankSum=-4.020;VQSLOD=1.6147;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:46:80.92:0,81,1549	0/0:13,0:13:33.10:0,33,554	./.	./.	0/1:22,0:20:0:0,0,0	1/1:24,0:23:0.47:1,0,0	0/1:21,0:21:37.92:38,0,46	0/0:36,0:24:51.45:0,51,487	0/1:15,2:16:7.05:223,0,7	0/0:27,0:20:39.16:0,39,567	0/0:13,0:8:9.01:0,9,123	0/0:32,0:29:66.21:0,66,1146	0/0:39,0:38:99:0,108,1964	0/1:30,2:28:35.60:55,0,36	0/0:46,0:43:99:0,111,1873	0/0:38,0:36:99:0,102,1857	0/1:44,0:42:12.17:12,0,39	0/1:28,0:25:67.45:67,0,305	0/0:15,0:8:20.99:0,21,321	0/0:27,0:24:20.63:0,21,308	0/0:28,0:19:6.24:0,6,79	0/0:24,0:24:57.12:0,57,876	0/1:20,0:20:0:0,0,0	0/0:46,0:41:68.29:0,68,1184	0/1:20,1:17:0:0,0,0	0/0:31,0:23:45.12:0,45,688	0/0:23,0:17:23.95:0,24,356	0/0:6,0:4:2.94:0,3,18
chr10	53455231	.	A	AC	8980.74	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-17.345;DP=743;FS=2.531;HRun=1;HaplotypeScore=70.4984;InbreedingCoeff=0.9901;MQ=78.93;MQ0=0;MQRankSum=-1.469;QD=42.16;ReadPosRankSum=3.104;VQSLOD=5.4105;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,102,1324	0/0:11,0:11:30.10:0,30,389	0/0:16,0:16:44.96:0,45,486	0/0:18,0:18:46.96:0,47,587	0/0:31,0:31:87.27:0,87,1114	0/0:26,0:26:78.25:0,78,1012	0/0:27,0:27:78.23:0,78,985	0/0:47,0:47:99:0,135,1718	0/0:27,0:27:81.26:0,81,1052	1/1:3,26:29:78.26:1163,78,0	1/1:1,27:28:75.25:1124,75,0	0/0:24,0:24:69.22:0,69,896	0/0:30,0:30:90.29:0,90,1168	0/0:29,0:29:87.27:0,87,1115	0/0:29,0:29:87.27:0,87,1110	0/0:34,0:34:99:0,99,1255	0/0:28,0:28:78.25:0,78,1013	0/0:14,0:14:42.14:0,42,545	1/1:1,23:24:69.19:984,69,0	1/1:0,32:32:93.32:1394,93,0	1/1:0,36:36:99:1574,105,0	0/0:26,0:26:78.25:0,78,1013	0/0:30,0:30:87.24:0,87,1087	0/0:24,0:24:68.83:0,69,896	0/0:23,0:23:66.19:0,66,828	1/1:0,29:29:87.29:1304,87,0	1/1:1,30:31:87.29:1304,87,0	1/1:1,3:4:9.03:135,9,0
chr10	53455425	.	G	GCC	5886.95	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-11.927;DP=638;FS=1.201;HRun=7;HaplotypeScore=75.7767;InbreedingCoeff=0.9989;MQ=88.06;MQ0=1;MQRankSum=-0.912;QD=41.46;ReadPosRankSum=0.464;VQSLOD=4.3526;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:66.19:0,66,768	0/0:13,0:13:36.10:0,36,419	0/0:22,0:22:52:0,52,562	0/0:24,0:24:44.98:0,45,493	1/1:0,26:28:78.27:1267,78,0	1/1:1,25:28:65.71:1022,66,0	1/1:2,13:16:35.61:551,36,0	0/0:24,0:24:57.13:0,57,647	1/1:3,21:24:64.10:1029,64,0	0/0:30,0:30:84.23:0,84,979	0/0:22,0:22:66.20:0,66,769	0/0:24,0:24:66.19:0,66,769	0/0:33,0:33:81.17:0,81,908	1/1:0,27:26:75.26:1230,75,0	0/0:34,0:34:90.20:0,90,1023	0/0:25,0:25:75.22:0,75,874	0/0:25,0:25:57.15:0,57,664	0/0:15,0:15:42.12:0,42,489	0/0:25,0:24:57.11:0,57,648	0/0:25,0:25:69.19:0,69,793	0/0:30,0:30:84.24:0,84,968	0/0:20,0:20:57.14:0,57,643	0/0:22,0:22:54.14:0,54,629	0/0:10,0:10:30.09:0,30,350	1/1:1,18:19:48.16:788,48,0	0/0:14,0:14:36.09:0,36,410	0/0:25,0:25:75.20:0,75,860	0/0:8,0:8:20.69:0,21,244
chr10	53456992	.	CTTGG	C	4983.60	PASS	AB=0.982;AC=19;AF=0.339;AN=56;BaseQRankSum=-0.313;DP=858;FS=1.662;HRun=0;HaplotypeScore=168.7993;InbreedingCoeff=0.5455;MQ=63.31;MQ0=14;MQRankSum=1.362;QD=15.29;ReadPosRankSum=3.096;VQSLOD=4.3622;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,120,2050	0/0:15,0:15:21.07:0,21,451	0/0:39,0:28:17.98:0,18,243	0/0:35,0:28:16.58:0,17,199	0/0:27,0:27:30.93:0,31,495	0/0:23,0:22:47.30:0,47,520	0/0:32,0:32:53.87:0,54,533	0/1:25,0:22:25.83:26,0,48	0/0:30,0:30:69.05:0,69,883	1/1:23,13:34:63.20:971,63,0	0/1:9,1:10:4.94:127,0,5	0/0:43,0:43:56.13:0,56,1719	0/0:32,0:32:72.12:0,72,1388	0/0:38,0:38:80.98:0,81,985	0/0:29,1:30:20.89:0,21,1248	0/0:32,0:32:60.12:0,60,1117	0/1:38,0:38:99:332,0,279	0/1:26,0:26:84.94:85,0,282	1/1:20,4:18:3.02:92,3,0	1/1:14,4:17:4.08:359,4,0	1/1:32,20:46:66.27:1255,66,0	0/0:28,0:28:57.11:0,57,999	0/1:19,0:19:6.68:7,0,572	0/0:51,0:51:99:0,108,2022	0/0:24,0:24:48.80:0,49,476	1/1:34,13:46:78.19:1102,78,0	1/1:3,26:28:36.12:580,36,0	1/1:1,1:2:3.01:48,3,0
chr10	53457005	.	T	TTGGC	2949.87	PASS	AB=0.829;AC=5;AF=0.089;AN=56;BaseQRankSum=-1.585;DP=859;FS=0.000;HRun=0;HaplotypeScore=179.7157;InbreedingCoeff=0.6997;MQ=56.82;MQ0=19;MQRankSum=-4.223;QD=29.21;ReadPosRankSum=0.982;VQSLOD=2.9741;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:60,0:60:99:0,147,2205	0/0:15,0:15:41.95:0,42,554	0/0:30,0:18:34.14:0,34,385	0/0:25,0:17:35.22:0,35,474	0/0:33,0:33:77.89:0,78,1058	0/0:25,0:24:66.07:0,66,944	0/0:29,0:29:87.04:0,87,1128	1/1:34,0:27:51.61:739,52,0	0/0:31,0:31:81.22:0,81,1345	0/0:35,0:32:68.02:0,68,561	0/0:8,0:8:16.32:0,16,126	0/0:44,0:44:99:0,125,1836	0/0:31,0:31:93.08:0,93,1412	0/0:37,0:37:99:0,108,1662	0/0:29,0:29:82.99:0,83,1297	0/0:33,0:33:93.13:0,93,1260	1/1:31,7:38:11.18:1544,11,0	0/1:23,6:29:90.18:792,0,90	0/0:26,0:17:19.66:0,20,226	0/0:20,0:18:31.51:0,32,301	0/0:52,0:45:97.66:0,98,858	0/0:22,0:22:63.11:0,63,1016	0/0:23,0:23:55.27:0,55,754	0/0:53,0:53:99:0,141,2159	0/0:22,0:22:61.37:0,61,913	0/0:43,0:40:92.23:0,92,730	0/0:31,0:30:26.79:0,27,263	0/0:1,0:1:3.01:0,3,33
chr10	53457021	.	TTGGC	T	2683.15	PASS	AB=0.941;AC=13;AF=0.232;AN=56;BaseQRankSum=7.307;DP=796;FS=4.224;HRun=0;HaplotypeScore=164.4412;InbreedingCoeff=0.0385;MQ=55.24;MQ0=17;MQRankSum=1.368;QD=8.88;ReadPosRankSum=1.199;VQSLOD=2.8898;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:56:99:0,139,2251	0/0:11,0:11:27.06:0,27,501	0/0:14,0:8:4.49:0,4,121	0/0:19,0:10:19.53:0,20,219	0/0:29,0:29:71.20:0,71,898	0/0:25,0:24:71.94:0,72,1027	0/0:28,0:28:78.09:0,78,1045	0/1:24,13:28:99:189,0,220	0/0:26,0:26:75.23:0,75,1427	1/1:29,0:25:31.13:366,31,0	0/1:7,0:7:15.05:35,0,15	0/0:41,0:41:88.99:0,89,1889	0/0:31,0:31:87.05:0,87,1636	0/0:37,0:37:99:0,105,1716	0/0:34,0:34:72.80:0,73,1565	0/0:29,0:29:78.07:0,78,1336	0/1:25,9:34:99:732,0,459	0/1:27,2:29:99:216,0,517	0/1:23,0:13:46.16:46,0,139	0/1:17,0:15:31.46:148,0,31	0/1:56,0:48:99:473,0,226	0/0:23,0:23:63.12:0,63,1017	0/0:19,0:19:24.27:0,24,605	0/0:53,0:53:99:0,144,2305	0/0:19,0:19:34.25:0,34,727	0/1:37,0:34:69.06:352,0,69	0/1:32,0:31:40.01:260,0,40	1/1:1,0:1:2.99:23,3,0
chr10	53457089	.	T	TGTTGGTTG	5089.62	PASS	AB=0.565;AC=23;AF=0.411;AN=56;BaseQRankSum=0.660;DP=721;FS=4.722;HRun=0;HaplotypeScore=175.8262;InbreedingCoeff=0.8465;MQ=57.87;MQ0=5;MQRankSum=-4.920;QD=18.18;ReadPosRankSum=-2.440;VQSLOD=3.9204;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:43:21.46:186,21,0	0/0:5,0:5:12.01:0,12,200	0/0:34,0:18:5.53:0,6,35	0/0:37,0:19:12.65:0,13,180	0/0:25,0:25:42.06:0,42,895	0/0:20,0:20:39.13:0,39,877	0/0:29,0:29:57.13:0,57,1116	1/1:23,0:23:19.74:185,20,0	0/0:27,0:27:69.19:0,69,1525	1/1:6,11:19:32.41:509,32,0	1/1:3,8:12:6.02:247,6,0	0/0:28,0:28:60.19:0,60,1444	0/0:30,0:30:63.20:0,63,1519	0/0:25,0:25:45.15:0,45,1004	0/0:33,0:34:66.70:0,67,1646	0/0:32,0:32:72.22:0,72,1681	0/1:8,0:35:39.75:233,0,40	1/1:13,0:33:33.83:271,34,0	1/1:17,0:17:18.05:357,18,0	1/1:2,5:11:9.03:214,9,0	1/1:19,23:46:12.04:374,12,0	0/0:26,0:26:57.14:0,57,1242	0/0:18,0:18:32.99:0,33,546	0/0:49,0:49:58.85:0,59,1710	0/0:22,0:22:55.30:0,55,1162	1/1:4,13:22:57.08:1503,57,0	1/1:15,2:18:27.08:887,27,0	1/1:0,0:1:3.01:123,3,0
chr10	53458608	.	GA	G	4471.20	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=13.061;DP=655;FS=0.000;HRun=9;HaplotypeScore=64.9885;InbreedingCoeff=0.9936;MQ=76.70;MQ0=0;MQRankSum=-1.348;QD=23.78;ReadPosRankSum=2.070;VQSLOD=5.6637;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:42.12:0,42,485	0/0:8,0:8:21.06:0,21,242	0/0:20,0:19:38.87:0,39,395	0/0:19,0:19:26.56:0,27,273	0/0:37,0:36:96.28:0,96,1100	0/0:34,0:34:96.27:0,96,1098	0/0:22,0:22:60.18:0,60,692	0/0:31,0:30:72.21:0,72,831	0/0:24,0:24:60.16:0,60,681	1/1:2,32:34:96.04:875,96,0	1/1:2,33:35:84.01:769,84,0	0/0:19,0:19:51.15:0,51,589	0/0:30,0:30:81.22:0,81,916	0/0:22,1:23:26.68:0,27,548	0/0:23,0:23:63.19:0,63,727	0/0:23,0:23:63.19:0,63,727	0/0:37,0:37:99:0,105,1187	0/0:6,0:6:15.02:0,15,161	1/1:2,14:16:42.02:384,42,0	1/1:2,18:20:51.02:467,51,0	1/1:2,15:17:39.02:357,39,0	0/0:28,0:28:78.22:0,78,890	0/0:23,0:23:54.16:0,54,620	0/0:22,0:22:57.14:0,57,636	0/0:24,0:24:69.19:0,69,787	1/1:4,29:33:87.04:796,87,0	1/1:1,26:27:75.04:686,75,0	1/1:1,5:6:15.01:137,15,0
chr10	53459842	.	C	CA	2974.92	PASS	AB=1.000;AC=20;AF=0.357;AN=56;BaseQRankSum=12.087;DP=662;FS=8.955;HRun=11;HaplotypeScore=85.0725;InbreedingCoeff=0.8182;MQ=70.52;MQ0=1;MQRankSum=0.900;QD=11.06;ReadPosRankSum=0.305;VQSLOD=2.6084;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,1:27:25.14:0,25,369	0/0:11,0:11:23.90:0,24,186	0/1:17,0:15:5.42:5,0,86	0/1:14,0:14:13.95:14,0,21	0/0:21,2:24:10.04:0,10,353	0/0:25,2:28:9.89:0,10,432	0/0:11,1:15:5.54:0,6,194	0/0:26,0:27:49.75:0,50,377	0/0:18,0:19:46.84:0,47,350	1/1:36,0:36:86.87:420,87,0	1/1:31,0:31:75.86:435,76,0	0/0:26,0:26:44.79:0,45,390	0/0:21,0:21:41.76:0,42,324	0/0:32,0:32:77.25:0,77,586	1/1:10,21:32:38.23:527,38,0	0/0:30,0:30:71.68:0,72,557	0/0:26,0:27:73.75:0,74,563	0/0:12,0:13:34.89:0,35,261	1/1:20,0:20:45.50:226,45,0	1/1:38,0:36:64.42:470,64,0	1/1:15,0:15:35.09:206,35,0	0/0:17,0:17:41.77:0,42,318	0/0:23,2:25:10.23:0,10,434	0/0:15,0:15:41.83:0,42,325	0/0:34,2:36:56.19:0,56,620	1/1:28,0:29:67.07:330,67,0	1/1:33,0:33:82.17:500,82,0	1/1:3,0:3:8.80:52,9,0
chr10	53459844	.	A	AC	7259.97	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-9.929;DP=661;FS=6.426;HRun=0;HaplotypeScore=71.1713;InbreedingCoeff=0.9622;MQ=71.95;MQ0=1;MQRankSum=1.021;QD=35.59;ReadPosRankSum=2.970;VQSLOD=4.4318;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:68.73:0,69,862	0/0:9,0:9:27.08:0,27,360	0/0:19,0:17:38.81:0,39,379	0/0:17,0:15:21.85:0,22,248	0/0:25,0:25:69.13:0,69,857	0/0:27,0:27:70.75:0,71,964	0/0:15,0:15:39.80:0,40,488	0/0:29,0:29:84.11:0,84,978	0/0:18,0:18:51.12:0,51,671	1/1:0,34:34:99:1353,102,0	1/1:0,31:31:84.08:1087,84,0	0/0:24,0:24:71.98:0,72,875	0/0:21,0:21:63.14:0,63,765	0/0:31,0:31:93.25:0,93,1201	0/0:33,0:33:3.37:0,3,230	0/0:29,0:29:84.24:0,84,1105	0/0:28,0:28:81.22:0,81,1071	0/0:13,0:13:39.07:0,39,503	1/1:1,20:21:63.06:767,63,0	1/1:1,38:37:93.88:1222,94,0	1/1:0,14:14:36.12:489,36,0	0/0:18,0:18:51.14:0,51,649	0/0:25,0:25:65.41:0,65,921	0/0:15,0:15:45.10:0,45,603	0/0:36,0:36:99:0,101,1306	1/1:1,28:29:87.19:1081,87,0	1/1:0,33:33:84.28:1138,84,0	1/1:0,3:3:9.03:122,9,0
chr10	53460001	.	AAAC	A	1935.39	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.275;DP=686;FS=1.862;HRun=0;HaplotypeScore=93.2867;InbreedingCoeff=0.9871;MQ=71.53;MQ0=0;MQRankSum=-2.475;QD=28.46;ReadPosRankSum=-1.344;VQSLOD=3.6039;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,114,2358	0/0:8,0:8:21.07:0,21,442	0/0:26,0:25:54.12:0,54,928	0/0:26,0:25:59.67:0,60,1040	0/0:29,0:29:81.28:0,81,1671	0/0:21,0:21:57.20:0,57,1194	0/0:31,0:33:84.15:0,84,1676	1/1:8,28:36:81.25:1175,81,0	0/0:23,0:23:63.20:0,63,1215	0/0:28,0:28:69.23:0,69,1397	0/0:23,0:23:69.21:0,69,1387	0/0:29,0:29:81.26:0,81,1628	0/0:31,0:31:81.28:0,81,1697	0/0:17,0:17:36.11:0,36,719	0/0:39,0:39:99:0,99,2069	0/0:28,0:28:66.19:0,66,1292	1/1:4,15:19:30.10:452,30,0	1/1:1,12:13:30.10:452,30,0	0/0:27,0:27:63.21:0,63,1248	0/0:29,0:29:72.23:0,72,1449	0/0:17,0:17:45.15:0,45,928	0/0:11,0:11:30.10:0,30,588	0/0:15,0:15:39.11:0,39,781	0/0:18,0:18:51.17:0,51,1043	0/0:25,0:25:66.23:0,66,1371	0/0:27,0:27:75.25:0,75,1517	0/0:38,0:38:99:0,102,2047	0/0:4,0:4:12.04:0,12,253
chr10	53460234	.	A	AATAG	16740.52	PASS	AB=0.529;AC=27;AF=0.482;AN=56;BaseQRankSum=-2.231;DP=544;FS=1.099;HRun=0;HaplotypeScore=92.1802;InbreedingCoeff=0.9359;MQ=72.06;MQ0=3;MQRankSum=-6.042;QD=60.00;ReadPosRankSum=2.019;VQSLOD=6.7578;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:60.21:0,60,1138	0/0:8,0:8:21.06:0,21,369	0/0:26,0:23:59.90:0,60,1066	0/0:21,0:11:27.09:0,27,454	1/1:4,26:32:74.85:1842,75,0	1/1:2,20:21:51.18:1375,51,0	1/1:1,9:12:27.09:716,27,0	0/0:38,0:38:99:0,108,2038	1/1:2,12:14:36.12:966,36,0	1/1:2,13:15:45.15:1158,45,0	0/1:2,16:18:5.79:1243,0,6	0/0:18,0:18:54.19:0,54,1025	0/0:28,0:28:81.26:0,81,1505	1/1:1,9:11:15.05:386,15,0	0/0:19,0:19:54.17:0,54,952	0/0:16,0:16:45.15:0,45,817	0/0:24,0:24:63.18:0,63,1128	0/0:12,0:12:36.10:0,36,648	1/1:5,15:23:63.18:1436,63,0	1/1:4,25:31:69.24:1758,69,0	1/1:2,8:9:18.06:475,18,0	0/0:5,0:5:15.04:0,15,254	0/0:20,0:20:57.18:0,57,1034	0/0:9,0:9:27.09:0,27,505	1/1:4,34:37:84.29:2242,84,0	1/1:1,17:20:60.21:1474,60,0	1/1:2,20:22:45.15:1185,45,0	1/1:0,10:11:18.06:485,18,0
chr10	53461796	.	AT	A	4177.17	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=10.905;DP=631;FS=4.825;HRun=7;HaplotypeScore=71.4124;InbreedingCoeff=0.9938;MQ=70.59;MQ0=0;MQRankSum=-0.194;QD=26.27;ReadPosRankSum=2.041;VQSLOD=4.5947;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,102,1269	0/0:11,0:11:30.10:0,30,377	0/0:13,0:13:25.35:0,25,256	0/0:10,0:8:13.34:0,13,183	1/1:3,35:38:99:1029,105,0	1/1:1,24:25:69.16:704,69,0	1/1:0,16:16:45.10:459,45,0	0/0:39,0:39:99:0,105,1288	1/1:2,22:24:57.13:579,57,0	0/0:32,0:32:96.30:0,96,1188	0/0:21,0:21:54.16:0,54,657	0/0:19,0:19:57.14:0,57,668	0/0:28,0:28:75.10:0,75,887	1/1:5,24:29:66.14:672,66,0	0/0:24,0:24:66.19:0,66,804	0/0:24,0:24:66.20:0,66,819	0/0:27,0:27:81.22:0,81,987	0/0:11,0:11:27.05:0,27,323	0/0:20,0:20:60.18:0,60,744	0/0:33,0:33:84.25:0,84,1030	0/0:11,0:11:30.10:0,30,377	0/0:16,0:16:45.14:0,45,565	0/0:22,0:22:63.19:0,63,782	0/0:16,0:16:45.13:0,45,554	1/1:0,27:27:72.16:734,72,0	0/0:32,0:32:84.24:0,84,1012	0/0:21,0:20:57.16:0,57,686	0/0:8,0:8:21.07:0,21,264
chr10	53464976	.	GATATATATATATGTATATATATATATATATATATATAT	G	8162.99	PASS	AC=14;AF=0.318;AN=44;BaseQRankSum=7.088;DP=264;FS=10.625;HRun=0;HaplotypeScore=230.5387;InbreedingCoeff=0.6622;MQ=65.40;MQ0=5;MQRankSum=-1.704;QD=60.02;ReadPosRankSum=1.735;VQSLOD=2.7272;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:6:12.02:0,12,711	0/0:2,0:2:3.01:0,3,245	0/0:9,0:4:3.01:0,3,78	0/0:20,0:11:3.57:0,4,10	0/0:5,0:5:3.01:0,3,118	./.	./.	0/0:24,0:24:33.11:0,33,2477	./.	1/1:12,8:20:27.06:1128,27,0	1/1:12,8:20:14.92:638,15,0	0/0:2,0:2:3:0,3,25	0/0:5,0:5:6.02:0,6,597	./.	0/0:1,0:1:3.01:0,3,91	0/0:2,0:2:6.02:0,6,292	0/0:15,0:15:9.48:0,9,408	0/0:13,0:13:27.03:0,27,1299	1/1:11,5:16:15.02:477,15,0	1/1:20,12:32:32.94:2039,33,0	./.	0/0:4,0:4:3.01:0,3,123	0/0:4,0:4:6.02:0,6,238	0/0:2,0:2:5.98:0,6,63	./.	1/1:9,9:18:27.04:1586,27,0	1/1:7,11:18:18.06:1736,18,0	1/1:8,4:12:6.02:558,6,0
chr10	53464989	.	GTATATATATATATA	G	2689.30	PASS	AB=0.700;AC=17;AF=0.607;AN=28;BaseQRankSum=5.671;DP=149;FS=2.541;HRun=0;HaplotypeScore=100.4985;InbreedingCoeff=0.5619;MQ=56.91;MQ0=5;MQRankSum=-2.467;QD=30.22;ReadPosRankSum=5.671;VQSLOD=1.9206;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:5:6.02:0,6,223	./.	./.	0/0:15,0:5:1.25:0,1,4	./.	0/0:2,0:2:6.02:0,6,129	./.	0/0:18,0:18:36.08:0,36,999	./.	1/1:9,0:9:9.03:294,9,0	1/1:8,0:8:6.02:196,6,0	./.	0/0:2,0:2:3.01:0,3,141	./.	./.	./.	1/1:8,9:17:3:119,3,0	0/1:8,6:14:0.78:229,0,1	1/1:5,0:5:3.01:98,3,0	1/1:12,0:12:21.07:618,21,0	./.	./.	./.	./.	./.	1/1:9,0:9:15.05:489,15,0	1/1:11,0:11:18.06:587,18,0	1/1:4,0:4:6.02:175,6,0
chr10	53468617	.	C	CT	8921.02	PASS	AB=1.000;AC=35;AF=0.625;AN=56;BaseQRankSum=-14.201;DP=592;FS=1.550;HRun=9;HaplotypeScore=54.7860;InbreedingCoeff=0.8930;MQ=72.51;MQ0=0;MQRankSum=-0.567;QD=22.30;ReadPosRankSum=-1.529;VQSLOD=4.9754;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:74.95:0,75,651	0/0:12,0:12:35.98:0,36,309	0/1:13,0:13:16.49:16,0,93	0/0:15,0:14:26.43:0,26,205	1/1:9,23:32:66.10:703,66,0	1/1:4,19:23:39.11:431,39,0	1/1:6,11:17:33.09:365,33,0	1/1:8,31:39:70.17:983,70,0	1/1:1,14:15:16.06:405,16,0	1/1:7,16:23:49.95:536,50,0	1/1:1,19:21:53.21:625,53,0	0/0:23,0:23:47.94:0,48,413	0/0:12,0:12:32.98:0,33,286	1/1:3,12:15:4.03:273,4,0	0/0:23,0:23:68.99:0,69,599	0/0:17,0:17:38.97:0,39,333	1/1:4,8:12:18.05:198,18,0	1/1:2,17:19:10.05:339,10,0	1/1:7,15:22:19.08:439,19,0	1/1:2,36:38:70.10:964,70,0	1/1:4,10:14:30.08:332,30,0	0/0:25,0:25:68.98:0,69,598	0/0:21,0:21:47.97:0,48,416	0/0:14,0:14:38.99:0,39,339	1/1:4,14:18:22.09:442,22,0	1/1:6,28:34:81.19:878,81,0	1/1:4,27:31:63.17:695,63,0	1/1:1,12:13:26.69:298,27,0
chr10	53470798	.	ATATGTGTGTGTGTG	A	4436.40	PASS	AB=0.896;AC=17;AF=0.304;AN=56;BaseQRankSum=11.068;DP=561;FS=0.000;HRun=0;HaplotypeScore=229.1102;InbreedingCoeff=0.4395;MQ=57.04;MQ0=10;MQRankSum=-2.775;QD=18.33;ReadPosRankSum=0.660;VQSLOD=3.4960;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:16:42.96:0,43,1731	0/0:7,0:7:20.92:0,21,349	0/0:23,0:15:38.36:0,38,508	0/0:30,0:20:37.41:0,37,413	0/1:27,0:27:18.58:19,0,212	0/1:26,0:25:99:105,0,204	0/0:22,0:22:32.96:0,33,273	0/0:35,0:35:99:0,102,2484	0/1:26,0:26:85.44:85,0,515	1/1:0,15:16:45.03:1015,45,0	0/1:0,12:13:0:0,0,0	0/0:22,0:22:57.08:0,57,2211	0/0:28,0:27:77.94:0,78,2849	0/1:20,0:20:75.82:76,0,104	0/0:22,0:22:66.09:0,66,2518	0/0:21,0:20:60.04:0,60,2227	0/0:13,0:13:27.41:0,27,637	0/0:6,0:6:18:0,18,546	1/1:0,14:14:41.60:512,42,0	1/1:0,20:20:8.82:245,9,0	0/0:5,26:29:0:0,0,0	0/0:6,0:6:15.02:0,15,632	0/0:13,0:13:26.83:0,27,922	0/0:23,0:23:60.03:0,60,2458	0/1:23,0:23:99:108,0,177	1/1:0,14:14:38.95:643,39,0	1/1:1,31:33:31.33:1396,31,0	0/1:7,3:10:90.09:233,0,90
chr10	53470800	.	ATGTGTGTGTGTG	A	3023	PASS	AB=0.909;AC=21;AF=0.375;AN=56;BaseQRankSum=8.343;DP=578;FS=0.000;HRun=0;HaplotypeScore=220.5878;InbreedingCoeff=0.5976;MQ=56.92;MQ0=11;MQRankSum=-6.094;QD=12.24;ReadPosRankSum=-0.132;VQSLOD=2.2973;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:20:34.34:0,34,1454	0/0:6,0:6:3.01:0,3,176	0/0:22,0:14:5.99:0,6,82	0/0:30,0:20:3.01:0,3,62	1/1:10,18:29:2.58:103,3,0	1/1:15,12:25:9.03:310,9,0	0/0:11,11:22:0.47:0,0,1	0/0:37,0:37:53.54:0,54,1781	0/1:15,8:24:99:163,0,167	1/1:17,0:17:22.63:538,23,0	0/1:15,0:15:0:0,0,0	0/0:20,0:21:33.11:0,33,1592	0/0:28,0:28:42.62:0,43,2033	1/1:6,13:19:6.02:207,6,0	0/0:22,0:22:36.12:0,36,1830	0/0:22,0:24:39.11:0,39,1900	0/0:12,0:12:9.50:0,10,392	0/0:8,0:8:15.05:0,15,499	1/1:14,0:13:6.02:170,6,0	1/1:20,0:20:6.02:145,6,0	0/0:31,0:29:0:0,0,0	0/0:6,0:6:9.03:0,9,501	0/0:12,0:14:11.69:0,12,689	0/0:25,0:25:36.12:0,36,2005	1/1:9,16:25:9.03:309,9,0	1/1:14,0:14:10.28:259,10,0	1/1:33,0:33:31.41:917,31,0	0/1:10,0:10:79.14:79,0,109
chr10	53472067	.	CTTCATGGTCT	C	12685.74	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=16.850;DP=757;FS=6.832;HRun=0;HaplotypeScore=228.8538;InbreedingCoeff=0.9964;MQ=80.32;MQ0=1;MQRankSum=-17.157;QD=70.87;ReadPosRankSum=2.696;VQSLOD=3.9352;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,99,4873	0/0:8,0:8:24.08:0,24,1126	0/0:26,0:25:66.21:0,66,3071	0/0:33,0:31:90.31:0,90,4236	1/1:1,30:31:57.66:1817,58,0	1/1:1,32:33:87.30:2843,87,0	1/1:4,17:21:41.94:1140,42,0	0/0:33,0:33:81.28:0,81,3998	1/1:0,27:27:63.22:2074,63,0	0/0:39,0:39:99:0,114,5632	0/0:30,0:30:87.28:0,87,4323	0/0:22,0:22:63.22:0,63,3251	0/0:28,0:28:81.28:0,81,4172	1/1:2,29:31:75.26:2458,75,0	0/0:30,0:30:90.31:0,90,4524	0/0:28,0:28:84.29:0,84,4187	0/0:30,0:29:81.28:0,81,3934	0/0:13,0:13:39.13:0,39,1880	0/0:16,0:16:48.16:0,48,2408	0/0:28,0:28:81.28:0,81,4172	0/0:36,0:36:99:0,99,4650	0/0:27,0:27:78.27:0,78,3917	0/0:25,0:25:66.23:0,66,3465	0/0:23,0:23:63.17:0,63,3070	1/1:1,35:36:72.25:2355,72,0	0/0:24,0:24:72.25:0,72,3618	0/0:40,0:40:99:0,120,6094	0/0:5,0:5:15.05:0,15,778
chr10	53476564	.	GAT	G	7973.02	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=13.581;DP=581;FS=7.570;HRun=0;HaplotypeScore=73.6182;InbreedingCoeff=0.9626;MQ=69.99;MQ0=0;MQRankSum=-1.207;QD=32.41;ReadPosRankSum=-0.836;VQSLOD=6.0773;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:45.15:0,45,759	0/0:12,1:13:0.52:0,1,569	0/0:15,0:14:33.11:0,33,522	0/0:18,0:17:36.12:0,36,553	0/0:35,0:35:96.33:0,96,1619	0/0:15,0:15:42.13:0,42,682	0/0:16,0:16:36.12:0,36,607	1/1:4,24:28:69.22:888,69,0	0/0:14,0:14:42.14:0,42,709	1/1:3,25:28:69.22:887,69,0	1/1:0,23:23:63.20:811,63,0	0/0:19,0:19:45.15:0,45,754	0/0:22,0:22:60.19:0,60,982	0/0:22,0:22:51.17:0,51,850	0/0:19,0:19:54.18:0,54,911	0/0:26,0:26:66.23:0,66,1114	1/1:2,15:17:42.14:541,42,0	1/1:0,16:16:42.09:522,42,0	1/1:2,10:12:30.10:386,30,0	1/1:6,35:41:99:1306,102,0	1/1:2,19:21:48.16:618,48,0	0/0:22,0:22:57.18:0,57,935	0/0:20,0:20:57.19:0,57,952	0/0:16,0:16:45.15:0,45,759	0/0:26,0:26:75.23:0,75,1235	1/1:3,19:22:57.14:702,57,0	1/1:4,29:33:87.28:1120,87,0	1/1:0,5:5:15.05:193,15,0
chr10	53476775	.	AATCT	A	15797.75	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=14.557;DP=606;FS=1.782;HRun=0;HaplotypeScore=109.1408;InbreedingCoeff=0.9829;MQ=92.30;MQ0=3;MQRankSum=-7.392;QD=44.88;ReadPosRankSum=4.374;VQSLOD=5.1155;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:54.19:0,54,1405	0/0:8,0:8:24.08:0,24,640	0/0:30,0:30:71.43:0,71,1864	0/0:28,0:28:81.28:0,81,2078	1/1:3,19:22:54.14:972,54,0	1/1:1,13:14:36.12:672,36,0	1/1:0,19:19:54.19:1008,54,0	1/1:3,32:35:93.26:1610,93,0	1/1:1,14:15:36.12:672,36,0	1/1:0,29:29:87.27:1540,87,0	1/1:1,17:18:42.10:748,42,0	0/0:26,0:26:78.27:0,78,2076	0/0:18,0:18:51.18:0,51,1359	1/1:1,27:27:75.26:1399,75,0	0/0:29,0:29:84.29:0,84,2228	0/0:24,1:25:16.25:0,16,1774	1/1:2,18:20:45.05:800,45,0	1/1:4,9:13:27.09:502,27,0	1/1:3,15:18:45.14:807,45,0	1/1:5,20:25:54.01:893,54,0	1/1:2,23:25:54.10:969,54,0	0/0:25,0:25:69.22:0,69,1748	0/0:21,0:21:63.18:0,63,1567	0/0:26,0:26:75.24:0,75,1912	1/1:1,29:29:75.26:1399,75,0	1/1:0,15:15:45.15:840,45,0	1/1:2,20:21:48.08:857,48,0	1/1:2,2:4:6.02:112,6,0
chr10	53479908	.	A	AT	3978.03	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=7.895;DP=624;FS=3.837;HRun=9;HaplotypeScore=114.2771;InbreedingCoeff=0.9880;MQ=84.38;MQ0=0;MQRankSum=-0.238;QD=26.17;ReadPosRankSum=1.924;VQSLOD=2.7178;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:42.88:0,43,365	0/0:9,0:9:23.94:0,24,199	0/0:20,0:20:36.77:0,37,281	0/0:20,0:20:19.51:0,20,215	1/1:1,30:31:81.18:880,81,0	1/1:2,26:28:75.20:828,75,0	1/1:4,17:21:45.12:498,45,0	0/0:36,0:36:98.94:0,99,852	1/1:5,18:23:25.17:505,25,0	0/0:38,0:38:99:0,105,910	0/0:23,0:23:62.98:0,63,547	0/0:17,0:17:44.99:0,45,391	0/0:22,0:22:56.97:0,57,494	1/1:2,31:33:84.23:928,84,0	0/0:23,0:23:68.99:0,69,599	0/0:20,0:20:56.99:0,57,495	0/0:16,0:16:38.60:0,39,338	0/0:16,0:16:41.92:0,42,354	0/0:14,0:14:35.99:0,36,313	0/0:33,1:34:56.05:0,56,719	0/0:12,0:12:26.98:0,27,234	0/0:15,0:15:32.98:0,33,286	0/0:17,0:18:53.03:0,53,449	0/0:9,0:10:28.99:0,29,233	1/1:5,11:16:10.04:339,10,0	0/0:31,0:31:86.96:0,87,752	0/0:44,0:43:99:0,123,1066	0/0:16,0:16:44.99:0,45,391
chr10	53480027	.	AT	A	10910.93	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=14.117;DP=631;FS=5.800;HRun=6;HaplotypeScore=62.2623;InbreedingCoeff=0.9954;MQ=74.34;MQ0=0;MQRankSum=-1.776;QD=29.17;ReadPosRankSum=3.945;VQSLOD=5.5649;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:54.04:0,54,686	0/0:6,0:6:18.06:0,18,237	0/0:9,0:8:13.59:0,14,161	0/0:12,1:14:22.04:0,22,262	1/1:1,36:37:99:1130,108,0	1/1:2,26:28:75.19:806,75,0	1/1:2,18:20:48.12:516,48,0	0/0:30,0:30:63.20:0,63,817	1/1:0,20:20:57.14:613,57,0	1/1:0,32:32:96.21:1019,96,0	1/1:1,22:23:63.16:677,63,0	0/0:17,0:17:51.15:0,51,656	0/0:17,0:17:42.11:0,42,523	1/1:0,19:19:54.14:580,54,0	0/0:24,0:24:69.21:0,69,892	0/0:28,1:29:48.99:0,49,966	0/0:15,0:15:42.14:0,42,552	0/0:13,0:13:36.10:0,36,457	1/1:5,19:24:57.13:605,57,0	1/1:3,29:32:84.21:903,84,0	1/1:0,15:15:45.11:484,45,0	0/0:22,0:22:63.20:0,63,829	0/0:26,0:26:75.23:0,75,972	0/0:14,0:14:36.12:0,36,474	1/1:2,34:36:90.22:967,90,0	1/1:1,32:33:96.24:1032,96,0	1/1:1,37:38:99:1161,108,0	1/1:2,15:17:39.10:419,39,0
chr10	53483756	.	T	TAA	2895.55	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=-7.760;DP=541;FS=2.052;HRun=11;HaplotypeScore=76.4218;InbreedingCoeff=0.8802;MQ=81.98;MQ0=1;MQRankSum=0.339;QD=20.54;ReadPosRankSum=0.693;VQSLOD=3.1342;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:57.03:0,57,553	0/0:9,0:10:29.79:0,30,274	0/0:20,0:20:16.92:0,17,203	0/1:15,0:15:2.55:3,0,94	1/1:7,25:34:72.13:950,72,0	1/1:1,22:28:61.15:773,61,0	1/1:1,7:10:21.07:289,21,0	0/0:4,0:27:57.07:0,57,241	1/1:1,16:17:23.92:347,24,0	0/0:24,0:25:47.90:0,48,511	0/0:16,0:16:39:0,39,364	0/0:12,0:12:26.97:0,27,244	0/0:16,0:16:42.03:0,42,407	1/1:3,11:14:24.97:350,25,0	0/0:11,0:11:30.03:0,30,285	0/0:21,0:21:47.94:0,48,447	0/0:3,0:26:52.13:0,52,225	0/0:1,0:13:27.44:0,27,119	0/0:17,0:17:47.80:0,48,442	0/0:23,0:26:34.28:0,34,519	0/0:11,0:11:26.97:0,27,255	0/0:17,0:17:39:0,39,373	0/0:30,0:30:72.04:0,72,698	0/0:22,0:22:63.09:0,63,611	1/1:5,17:22:1:362,1,0	0/0:20,0:20:51.05:0,51,494	0/0:28,0:30:71.82:0,72,681	0/0:7,0:7:18.02:0,18,174
chr10	53484218	.	C	CAT	2130.19	PASS	AB=0.556;AC=31;AF=0.596;AN=52;BaseQRankSum=3.422;DP=244;FS=2.698;HRun=0;HaplotypeScore=54.0296;InbreedingCoeff=0.7093;MQ=66.36;MQ0=4;MQRankSum=-2.492;QD=12.03;ReadPosRankSum=-1.466;VQSLOD=2.7707;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:8:18.06:0,18,233	0/0:1,0:1:3.01:0,3,39	0/0:9,0:6:2.84:0,3,14	0/0:12,0:6:4.80:0,5,26	1/1:5,0:5:2.86:46,3,0	1/1:10,0:10:9.25:102,9,0	1/1:3,0:3:5.75:59,6,0	1/1:44,0:39:59.75:464,60,0	1/1:8,0:8:9.74:80,10,0	1/1:6,1:7:21.04:319,21,0	1/1:2,2:4:3.01:47,3,0	0/0:3,0:3:6.02:0,6,79	0/0:6,0:6:15.05:0,15,191	1/1:7,0:7:5.55:18,6,0	0/0:6,0:6:12.04:0,12,158	0/0:9,0:9:18.06:0,18,237	1/1:16,0:16:22.47:131,22,0	1/1:26,0:26:19.91:132,20,0	1/1:6,3:8:15.05:234,15,0	0/1:1,4:5:0:0,0,0	./.	./.	0/0:3,0:3:6:0,6,63	0/0:6,0:6:15.05:0,15,196	1/1:8,0:8:2.60:10,3,0	1/1:6,2:8:12.04:196,12,0	1/1:9,3:12:24.06:331,24,0	1/1:4,1:5:9.03:141,9,0
chr10	53484222	.	TATATGTATATATATATAC	T	260.09	PASS	AB=0.954;AC=11;AF=0.212;AN=52;BaseQRankSum=-3.253;DP=228;FS=0.815;HRun=0;HaplotypeScore=116.2779;InbreedingCoeff=-0.1799;MQ=64.09;MQ0=4;MQRankSum=3.915;QD=2.39;ReadPosRankSum=-4.262;VQSLOD=0.9564;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:21.05:0,21,1479	0/0:1,0:1:2.99:0,3,24	0/0:7,0:3:2.74:0,3,12	0/0:12,0:5:2.98:0,3,22	0/0:3,0:3:3.90:0,4,128	0/1:9,0:9:23.61:24,0,600	0/1:3,0:3:16.84:17,0,85	0/1:43,0:38:99:107,0,1526	0/1:8,0:8:7.84:8,0,377	0/1:7,0:7:75.16:75,0,497	1/1:4,0:4:2.99:23,3,0	0/0:3,0:3:6.02:0,6,436	0/0:6,0:6:18.04:0,18,1042	0/0:5,0:5:9.03:0,9,314	0/0:5,0:5:12.04:0,12,1022	0/0:7,0:7:18.06:0,18,1455	0/0:15,0:15:24.08:0,24,949	0/0:23,0:23:15.07:0,15,1207	0/1:10,0:9:4.18:4,0,413	0/0:6,0:6:6.02:0,6,117	./.	./.	0/0:3,0:3:5.99:0,6,48	0/0:5,0:5:15.03:0,15,716	0/0:6,0:6:3.01:0,3,113	0/1:2,5:7:77.65:78,0,397	0/1:12,0:12:24.59:25,0,541	0/1:6,0:6:32.50:33,0,269
chr10	53484225	.	ATG	A	1668.22	PASS	AB=0.985;AC=24;AF=0.462;AN=52;BaseQRankSum=4.482;DP=212;FS=0.652;HRun=0;HaplotypeScore=53.0865;InbreedingCoeff=0.3098;MQ=61.60;MQ0=5;MQRankSum=-1.851;QD=11.20;ReadPosRankSum=-1.122;VQSLOD=3.1138;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:24.05:0,24,369	0/0:2,0:2:5.99:0,6,49	0/0:8,0:3:2.68:0,3,11	0/0:10,0:3:2.98:0,3,22	1/1:3,0:3:0.89:5,1,0	1/1:9,0:9:17.37:82,17,0	1/1:3,0:3:0.57:33,1,0	1/1:12,29:35:76.02:663,76,0	1/1:7,0:7:3.93:38,4,0	0/1:7,0:7:68.23:75,0,68	1/1:3,0:3:2.99:23,3,0	0/0:3,0:3:6.02:0,6,115	0/0:6,0:6:18.06:0,18,322	0/1:4,0:4:0.47:10,0,0	0/0:4,0:4:12.04:0,12,231	0/0:6,0:6:18.06:0,18,347	1/1:0,15:15:23.67:306,24,0	1/1:3,18:21:35.95:463,36,0	0/1:9,1:9:17.53:18,0,60	0/0:6,0:6:6.23:0,6,21	./.	./.	0/0:3,0:3:5.99:0,6,48	0/0:5,0:5:15.03:0,15,255	1/1:4,0:4:1.55:4,2,0	0/1:7,0:7:33.79:34,0,46	0/1:9,0:9:46.29:46,0,49	0/1:6,0:6:30.68:33,0,31
chr10	53484229	.	A	ATG	1501.64	PASS	AB=1.000;AC=14;AF=0.269;AN=52;BaseQRankSum=1.606;DP=214;FS=2.329;HRun=0;HaplotypeScore=55.0230;InbreedingCoeff=0.5235;MQ=65.85;MQ0=5;MQRankSum=0.967;QD=14.58;ReadPosRankSum=-1.680;VQSLOD=3.1744;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:24.07:0,24,344	0/0:2,0:2:6.01:0,6,69	0/0:9,0:3:0:0,0,0	0/0:12,0:5:4.26:0,4,14	0/0:3,0:3:2.43:0,2,13	0/0:8,0:8:12.32:0,12,53	1/1:3,0:3:5.34:22,5,0	1/1:34,8:36:64.11:884,64,0	0/0:7,0:7:5.45:0,5,25	0/1:8,0:8:1.21:1,0,46	1/1:4,0:4:0.85:2,1,0	0/0:3,0:3:6.01:0,6,73	0/0:7,0:7:17.86:0,18,183	0/0:4,0:4:2.73:0,3,17	0/0:4,0:4:12.04:0,12,183	0/0:6,0:6:18.06:0,18,275	1/1:15,0:15:24.07:318,24,0	1/1:20,1:21:35.90:411,36,0	0/0:9,0:8:10.20:0,10,93	0/0:5,0:5:8.56:0,9,53	./.	./.	0/0:2,0:2:3:0,3,25	0/0:5,0:5:15.01:0,15,164	1/1:3,0:3:1.25:3,1,0	0/0:7,0:7:6.29:0,6,47	0/0:7,0:7:11.04:0,11,82	0/1:7,0:7:5.05:5,0,21
chr10	53484240	.	CATAT	C	1918.66	PASS	AB=1.000;AC=19;AF=0.396;AN=48;BaseQRankSum=1.659;DP=225;FS=1.499;HRun=0;HaplotypeScore=57.5114;InbreedingCoeff=0.6976;MQ=60.13;MQ0=5;MQRankSum=-1.458;QD=16.26;ReadPosRankSum=-0.104;VQSLOD=3.0758;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:27.09:0,27,647	0/0:2,0:2:5.51:0,6,85	./.	0/0:12,0:5:4.80:0,5,23	1/1:0,5:5:3.01:52,3,0	1/1:0,8:8:15.05:259,15,0	1/1:5,0:5:12.04:183,12,0	1/1:41,0:34:49.22:536,49,0	1/1:1,7:8:9.03:155,9,0	0/1:1,0:5:4.72:5,0,101	0/0:4,0:4:5.97:0,6,45	0/0:1,0:5:3.01:0,3,53	0/0:2,0:7:12.04:0,12,235	1/1:1,4:5:6.02:104,6,0	0/0:8,0:8:24.08:0,24,471	0/0:7,0:7:18.06:0,18,429	1/1:17,0:17:33.07:384,33,0	1/1:20,0:20:33.04:367,33,0	0/0:6,0:9:14.01:0,14,151	0/0:3,0:4:9:0,9,81	./.	./.	./.	0/0:2,0:4:6.02:0,6,106	1/1:4,0:4:3.01:48,3,0	0/0:5,0:7:12.02:0,12,157	0/0:2,0:12:8.39:0,8,89	0/0:2,0:5:11.99:0,12,127
chr10	53484975	.	A	AG	565.53	PASS	AB=0.790;AC=12;AF=0.353;AN=34;BaseQRankSum=6.951;DP=146;FS=8.560;HRun=2;HaplotypeScore=63.4475;InbreedingCoeff=-0.5320;MQ=58.59;MQ0=3;MQRankSum=-3.654;QD=6.43;ReadPosRankSum=0.684;VQSLOD=0.1974;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:7,1:8:5.65:0,6,176	./.	0/0:14,1:5:12.04:0,12,149	0/0:17,0:5:11.87:0,12,156	./.	./.	./.	./.	./.	0/1:11,2:13:72.88:73,0,240	0/1:2,5:7:26.14:92,0,26	0/1:7,1:8:73.48:73,0,156	0/1:6,1:7:25.41:25,0,176	./.	0/1:6,1:7:20.32:20,0,210	0/1:4,1:4:0.76:1,0,105	./.	./.	0/0:6,0:6:15.93:0,16,197	0/1:6,4:10:99:124,0,167	0/0:9,0:9:15.05:0,15,194	0/1:9,3:12:99:128,0,240	0/1:2,1:3:20.45:20,0,68	./.	./.	0/1:2,1:3:30.91:31,0,69	0/1:6,1:7:10.19:10,0,63	0/1:3,3:6:24.39:85,0,24
chr10	53484995	.	AAG	A	400.05	PASS	AB=0.799;AC=10;AF=0.263;AN=38;BaseQRankSum=6.855;DP=182;FS=6.265;HRun=0;HaplotypeScore=68.7365;InbreedingCoeff=-0.3705;MQ=52.30;MQ0=9;MQRankSum=-4.144;QD=4.88;ReadPosRankSum=0.285;VQSLOD=1.3629;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:24.08:0,24,462	0/0:3,0:3:9.03:0,9,163	0/0:28,0:8:21.04:0,21,336	0/0:24,0:6:21.04:0,21,381	./.	./.	./.	./.	./.	0/1:9,2:11:53.36:53,0,398	0/1:1,4:5:19.90:108,0,20	0/1:6,2:8:51.06:51,0,281	0/1:8,1:9:18.68:19,0,400	./.	0/1:5,1:6:29.79:30,0,210	0/0:2,0:1:3.01:0,3,61	./.	./.	0/0:8,0:7:20.66:0,21,355	0/1:8,3:11:99:109,0,272	0/0:13,0:13:27.05:0,27,500	0/1:8,3:11:37.09:37,0,378	0/0:6,0:6:7.90:0,8,218	0/0:3,0:3:3.48:0,3,62	./.	0/1:4,1:5:29.97:30,0,227	0/1:6,1:7:4.11:4,0,9	0/1:6,3:9:80.60:81,0,140
chr10	53485019	.	AAGGGAGGG	A	1313.39	PASS	AC=16;AF=0.444;AN=36;BaseQRankSum=4.386;DP=155;FS=7.505;HRun=0;HaplotypeScore=67.6397;InbreedingCoeff=0.6772;MQ=41.09;MQ0=11;MQRankSum=-0.282;QD=19.31;ReadPosRankSum=0.181;VQSLOD=1.3118;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:21.03:0,21,534	0/0:5,0:4:12.04:0,12,432	./.	0/0:12,0:2:2.98:0,3,21	./.	./.	./.	./.	./.	1/1:6,4:10:8.96:195,9,0	1/1:1,1:2:3.01:78,3,0	0/0:8,0:8:12.04:0,12,434	0/0:11,0:10:27.09:0,27,913	./.	0/0:3,0:3:3.01:0,3,126	0/0:3,0:2:3.01:0,3,126	./.	./.	1/1:6,0:5:3.01:46,3,0	1/1:4,7:11:15:278,15,0	1/1:13,0:13:9.03:189,9,0	0/0:9,0:7:16.61:0,17,627	0/0:8,0:7:12.04:0,12,400	0/0:3,0:3:3.01:0,3,126	./.	1/1:2,8:10:18.05:353,18,0	1/1:2,5:6:3.01:78,3,0	1/1:4,4:8:11.53:241,12,0
chr10	53486487	.	CAA	C	1194.95	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=5.494;DP=547;FS=2.608;HRun=13;HaplotypeScore=69.0064;InbreedingCoeff=0.9068;MQ=60.17;MQ0=7;MQRankSum=-0.102;QD=20.25;ReadPosRankSum=1.491;VQSLOD=3.2806;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:34:59.68:0,60,1030	0/0:9,0:12:26.02:0,26,298	0/0:14,0:4:8.98:0,9,82	0/0:8,0:4:2.99:0,3,31	0/0:28,0:30:69.57:0,70,903	0/0:19,0:23:47.60:0,48,561	0/0:18,0:19:49.40:0,49,678	1/1:6,27:31:71.99:741,72,0	0/0:13,0:12:36.06:0,36,446	0/0:18,0:20:43.55:0,44,470	0/0:23,0:26:60.06:0,60,723	0/0:19,0:20:48.13:0,48,643	0/0:16,0:15:36.07:0,36,443	0/0:17,0:15:39.10:0,39,511	0/0:23,0:23:45.08:0,45,812	0/0:20,0:22:53.09:0,53,656	1/1:2,15:18:47.81:448,48,0	1/1:2,6:8:14.96:145,15,0	0/0:26,0:27:57.86:0,58,672	0/0:25,0:26:33.85:0,34,615	0/0:10,0:10:24.06:0,24,311	0/0:8,0:8:18.05:0,18,243	0/0:20,0:20:42.09:0,42,551	0/0:11,0:9:15.01:0,15,181	0/0:27,0:26:65.67:0,66,883	0/0:28,0:29:71.65:0,72,857	0/0:13,0:13:36.09:0,36,479	0/0:15,0:15:27.09:0,27,387
chr10	53486524	.	GCA	G	96.51	PASS	AB=0.872;AC=5;AF=0.089;AN=56;BaseQRankSum=5.888;DP=517;FS=33.724;HRun=0;HaplotypeScore=67.0748;InbreedingCoeff=-0.0862;MQ=63.14;MQ0=0;MQRankSum=-5.862;QD=0.85;ReadPosRankSum=-0.651;VQSLOD=-0.0086;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:26,2:28:11.66:12,0,1102	0/0:9,0:9:27.09:0,27,486	0/0:7,0:7:20.98:0,21,295	0/1:7,0:7:0.16:0,0,217	0/0:21,0:21:63.19:0,63,1062	0/0:26,2:27:72.25:0,72,1296	0/0:11,2:11:30.10:0,30,539	0/1:34,10:39:99:147,0,1381	0/0:12,1:12:36.12:0,36,648	0/0:22,1:22:66.23:0,66,1168	0/0:26,0:26:75.26:0,75,1337	0/0:16,0:16:42.13:0,42,721	0/0:14,1:14:42.14:0,42,751	0/0:13,3:14:39.10:0,39,608	0/1:22,2:24:17.66:18,0,1005	0/0:14,1:15:39.13:0,39,701	0/0:19,2:19:57.17:0,57,993	0/0:13,0:12:36.12:0,36,648	0/0:22,2:22:60.18:0,60,1015	0/0:15,0:15:42.12:0,42,698	0/0:20,0:20:60.21:0,60,1080	0/0:8,0:8:24.08:0,24,432	0/0:15,0:15:42.14:0,42,756	0/1:6,5:7:26.88:27,0,201	0/0:21,0:21:60.06:0,60,1003	0/0:22,2:24:66.23:0,66,1189	0/0:28,0:28:81.28:0,81,1442	0/0:12,0:12:36.10:0,36,617
chr10	53486538	.	CCCG	C	128.18	PASS	AB=0.836;AC=4;AF=0.071;AN=56;BaseQRankSum=5.407;DP=553;FS=26.625;HRun=0;HaplotypeScore=80.1753;InbreedingCoeff=-0.0772;MQ=62.72;MQ0=0;MQRankSum=-5.354;QD=1.19;ReadPosRankSum=-0.365;VQSLOD=-0.4006;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:24,3:26:26.42:26,0,1696	0/0:9,0:9:27.09:0,27,650	0/0:10,0:9:24.08:0,24,504	0/0:9,0:8:20.86:0,21,377	0/0:24,0:24:72.25:0,72,1676	0/0:28,2:29:84.29:0,84,2017	0/0:17,2:17:51.17:0,51,1207	0/1:32,9:37:99:156,0,2124	0/0:15,1:15:45.15:0,45,1109	0/0:28,1:28:84.27:0,84,2012	0/0:29,0:29:87.30:0,87,2133	0/0:15,0:15:45.15:0,45,1098	0/0:16,1:16:48.16:0,48,1181	0/0:13,2:14:39.13:0,39,961	0/1:24,3:27:26.58:27,0,1613	0/0:17,1:18:51.17:0,51,1205	0/0:21,2:21:63.22:0,63,1505	0/0:13,0:13:39.13:0,39,937	0/0:18,2:18:54.17:0,54,1214	0/0:13,0:13:39.13:0,39,935	0/0:23,2:24:69.24:0,69,1661	0/0:8,0:8:24.08:0,24,567	0/0:15,0:15:45.15:0,45,1093	0/1:8,5:9:28.72:29,0,493	0/0:17,0:17:51.18:0,51,1231	0/0:28,2:30:84.29:0,84,1967	0/0:28,0:28:84.29:0,84,2005	0/0:13,0:13:39.13:0,39,961
chr10	53487182	.	G	GT	7870.28	PASS	AB=0.944;AC=37;AF=0.661;AN=56;BaseQRankSum=-0.040;DP=584;FS=27.964;HRun=8;HaplotypeScore=80.9764;InbreedingCoeff=0.8094;MQ=75.70;MQ0=0;MQRankSum=-1.322;QD=17.81;ReadPosRankSum=2.062;VQSLOD=3.4586;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:62.99:0,63,566	0/1:4,1:5:22.55:23,0,70	0/1:26,0:23:6.60:7,0,209	0/1:18,0:16:1.72:2,0,118	1/1:1,0:23:62.48:319,62,0	1/1:1,0:27:54.01:274,54,0	1/1:3,0:14:22.76:116,23,0	1/1:33,0:33:82.41:636,82,0	1/1:0,0:19:36.93:188,37,0	1/1:5,25:29:72.20:822,72,0	1/1:1,14:15:42.04:455,42,0	0/0:20,0:20:50.99:0,51,461	0/0:22,0:22:50.02:0,50,465	1/1:0,0:11:25.57:130,26,0	0/0:16,0:16:36.02:0,36,329	0/0:17,0:17:42.01:0,42,381	1/1:27,0:27:46.44:263,46,0	1/1:21,1:22:29.54:191,30,0	1/1:3,16:19:48.14:552,48,0	1/1:2,22:24:66.09:730,66,0	1/1:3,9:12:27.08:312,27,0	0/0:15,0:15:42:0,42,379	0/0:20,0:19:54.03:0,54,494	0/0:10,0:10:23.97:0,24,211	1/1:0,0:31:68.18:347,68,0	1/1:5,18:23:57.10:640,57,0	1/1:3,30:33:53.79:873,54,0	1/1:1,28:29:87.25:994,87,0
chr10	53487187	.	T	TTTTTG	5305.60	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=-9.980;DP=601;FS=22.745;HRun=0;HaplotypeScore=138.7508;InbreedingCoeff=0.1859;MQ=71.48;MQ0=0;MQRankSum=-2.519;QD=18.17;ReadPosRankSum=-4.478;VQSLOD=2.2527;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:66.18:0,66,1205	0/1:5,0:5:22.58:23,0,165	0/0:24,0:20:41.57:0,42,509	0/0:15,0:13:15.20:0,15,340	0/1:25,0:25:19.88:20,0,53	0/1:28,0:28:1.63:2,0,44	0/0:14,0:14:3.07:0,3,43	1/1:5,36:44:99:2721,117,0	0/1:20,0:20:13.19:13,0,20	0/1:28,0:27:38.55:39,0,267	0/1:15,0:15:1.81:2,0,122	0/0:21,0:21:60.15:0,60,1008	0/0:21,0:21:60.16:0,60,1047	0/0:14,0:14:2.75:0,3,49	0/0:15,0:15:39.08:0,39,733	0/0:15,0:15:45.15:0,45,845	1/1:2,28:30:48.16:1437,48,0	1/1:3,18:22:36.07:867,36,0	0/1:19,0:19:98.89:140,0,99	0/0:24,0:24:38.87:0,39,327	0/0:13,0:13:9.14:0,9,140	0/0:15,0:15:45.14:0,45,838	0/0:22,0:21:60.15:0,60,1003	0/0:11,0:11:26.98:0,27,376	0/1:32,0:32:20.99:21,0,22	0/1:24,0:24:22.20:22,0,262	0/0:34,0:34:40.24:0,40,395	0/0:29,0:29:39.57:0,40,336
chr10	53492298	.	TA	T	1813.75	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=8.730;DP=389;FS=4.986;HRun=5;HaplotypeScore=41.2512;InbreedingCoeff=0.8126;MQ=71.56;MQ0=2;MQRankSum=1.001;QD=19.50;ReadPosRankSum=-0.250;VQSLOD=2.6008;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:75.03:0,75,893	0/0:7,0:7:21.06:0,21,268	0/0:22,0:12:17.56:0,18,182	0/1:21,0:9:7.27:7,0,54	0/0:15,0:15:42.11:0,42,532	0/0:14,0:14:42.14:0,42,563	0/0:13,0:13:36.12:0,36,481	1/1:7,30:37:90.10:935,90,0	0/0:4,0:4:12.03:0,12,147	0/0:15,0:15:45.14:0,45,587	0/0:15,0:15:39.11:0,39,494	0/0:6,0:6:18.04:0,18,213	0/0:13,0:13:33.07:0,33,396	0/0:6,0:6:18.05:0,18,226	0/0:5,0:5:15.05:0,15,200	0/0:10,0:10:30.10:0,30,401	1/1:3,24:27:66.19:746,66,0	1/1:0,8:8:24.07:271,24,0	0/0:21,0:21:63.18:0,63,803	0/0:17,0:17:51.14:0,51,652	0/0:6,0:6:18.02:0,18,193	0/0:5,0:5:14.99:0,15,139	0/0:6,0:6:18.03:0,18,221	0/0:4,0:4:9:0,9,89	0/0:16,0:16:48.14:0,48,614	0/0:22,0:22:60.16:0,60,770	0/0:19,0:19:57.17:0,57,745	0/0:8,0:8:24.05:0,24,289
chr10	53494429	.	C	CATAG	2283.80	PASS	AB=0.871;AC=38;AF=0.792;AN=48;BaseQRankSum=-0.806;DP=592;FS=8.690;HRun=0;HaplotypeScore=117.2516;InbreedingCoeff=0.4498;MQ=62.73;MQ0=4;MQRankSum=0.817;QD=5.54;ReadPosRankSum=-1.803;VQSLOD=1.4783;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:31,0:31:5.94:6,0,198	1/1:1,1:2:3.01:69,3,0	./.	./.	1/1:22,0:21:11.99:122,12,0	1/1:24,0:23:9.84:97,10,0	0/1:21,0:20:0:0,0,0	./.	1/1:25,0:25:12.50:174,12,0	1/1:18,0:18:12.01:124,12,0	0/1:8,2:13:0:0,0,0	1/1:20,0:20:3:25,3,0	1/1:22,8:31:6.02:138,6,0	./.	0/0:31,0:31:23.85:0,24,330	0/0:26,0:27:24.06:0,24,323	0/0:18,0:18:12.04:0,12,170	1/1:13,0:13:6.02:115,6,0	1/1:15,1:16:9.01:128,9,0	1/1:13,0:13:9.03:205,9,0	1/1:25,0:25:15.01:186,15,0	1/1:8,5:16:9.03:206,9,0	0/1:11,5:16:29.77:260,0,30	1/1:19,7:26:15.05:344,15,0	1/1:23,0:22:11.91:92,12,0	1/1:25,0:25:7.25:57,7,0	1/1:19,1:26:3.01:52,3,0	1/1:4,0:4:3:25,3,0
chr10	53494434	.	A	ATAGG	1496.22	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=3.595;DP=578;FS=14.540;HRun=0;HaplotypeScore=117.4639;InbreedingCoeff=-0.0255;MQ=61.47;MQ0=5;MQRankSum=-0.758;QD=5.82;ReadPosRankSum=-3.258;VQSLOD=0.7313;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:59.91:0,60,639	0/1:2,0:2:18.98:38,0,19	0/0:19,0:11:22.97:0,23,264	0/0:20,0:14:10.09:0,10,144	0/1:19,0:18:1.72:2,0,169	0/0:23,0:22:9.84:0,10,216	0/0:20,0:19:35.87:0,36,286	1/1:36,0:32:83.15:651,83,0	0/1:25,0:25:17.47:17,0,333	0/0:17,0:17:19.98:0,20,294	0/0:13,0:13:14.89:0,15,125	0/0:20,0:20:29.92:0,30,247	0/1:29,0:29:36.79:37,0,321	0/0:26,0:26:53.94:0,54,451	0/0:26,0:26:56.84:0,57,718	0/0:28,0:28:65.97:0,66,769	0/1:17,0:17:34.38:221,0,34	1/1:0,14:14:6.02:161,6,0	0/1:20,0:18:15.53:16,0,310	0/1:12,0:12:97.41:97,0,167	0/1:24,0:24:25:25,0,211	0/1:17,0:17:99:101,0,146	0/1:18,0:18:99:126,0,302	0/1:24,0:24:99:165,0,270	0/0:23,0:22:29.82:0,30,237	0/0:27,0:27:68.68:0,69,583	0/0:24,0:24:11.71:0,12,296	0/0:4,0:4:8.43:0,8,68
chr10	53494789	.	T	TAA	4474.55	PASS	AB=0.721;AC=34;AF=0.607;AN=56;BaseQRankSum=-3.859;DP=267;FS=0.000;HRun=9;HaplotypeScore=29.8705;InbreedingCoeff=0.7686;MQ=58.81;MQ0=2;MQRankSum=-0.093;QD=21.93;ReadPosRankSum=-1.371;VQSLOD=2.1479;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:36.08:0,36,383	0/0:5,0:5:15.04:0,15,160	0/0:4,0:3:9.02:0,9,96	0/0:3,0:2:2.99:0,3,32	1/1:2,12:14:33.07:482,33,0	1/1:1,6:8:18.06:260,18,0	1/1:1,8:9:12.04:185,12,0	1/1:8,0:21:15.52:120,16,0	1/1:1,6:8:17.55:239,18,0	1/1:2,3:5:9.03:139,9,0	1/1:1,4:5:9.03:139,9,0	0/0:4,0:4:9.02:0,9,96	0/0:5,0:5:15.04:0,15,160	1/1:1,9:9:21.03:323,21,0	0/0:9,0:9:24.04:0,24,255	0/1:10,1:11:16.06:16,0,256	1/1:1,0:14:27.45:94,27,0	1/1:5,0:14:19.96:68,20,0	1/1:3,14:17:42.05:567,42,0	1/1:1,7:8:17.97:224,18,0	1/1:2,9:11:15.05:213,15,0	0/0:1,0:1:3.01:0,3,32	0/0:4,0:4:12.03:0,12,128	0/0:13,0:13:36.03:0,36,371	1/1:2,14:16:33.11:508,33,0	0/1:1,8:10:1.84:368,0,2	1/1:4,6:10:15.02:205,15,0	1/1:0,9:9:21.07:323,21,0
chr10	53495667	.	C	CA	2891.38	PASS	AB=0.929;AC=14;AF=0.250;AN=56;BaseQRankSum=-7.885;DP=594;FS=1.789;HRun=11;HaplotypeScore=61.3804;InbreedingCoeff=0.7700;MQ=76.26;MQ0=0;MQRankSum=-0.466;QD=17.11;ReadPosRankSum=-0.241;VQSLOD=4.3405;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:56.76:0,57,441	0/1:5,1:6:12.52:13,0,96	0/0:13,0:13:17.64:0,18,110	0/0:19,0:16:1.54:0,2,59	1/1:10,28:38:72.10:720,72,0	1/1:4,24:30:71.81:699,72,0	1/1:5,13:18:39.08:396,39,0	0/0:27,1:30:21.36:0,21,330	1/1:2,11:13:11.67:283,12,0	0/0:26,0:26:56.74:0,57,437	0/0:21,1:24:27.42:0,27,376	0/0:22,1:24:34.33:0,34,437	0/0:20,0:21:52.82:0,53,400	1/1:1,16:17:39.02:379,39,0	0/0:16,1:18:13.46:0,13,275	0/0:21,0:22:55.82:0,56,424	0/0:23,0:23:59.76:0,60,464	0/0:11,0:11:29.88:0,30,232	0/0:24,0:24:56.76:0,57,439	0/0:17,0:18:40.85:0,41,308	0/0:11,0:11:20.87:0,21,162	0/0:25,0:27:66.80:0,67,499	0/1:19,0:19:10.96:11,0,257	0/0:10,0:11:16.94:0,17,122	1/1:5,23:28:58.36:580,58,0	0/0:37,0:37:80.58:0,81,625	0/0:32,1:34:74.64:0,75,574	0/0:12,0:12:23.90:0,24,186
chr10	53495952	.	AGT	A	716.76	PASS	AB=0.963;AC=31;AF=0.646;AN=48;BaseQRankSum=3.250;DP=619;FS=1.844;HRun=0;HaplotypeScore=90.1011;InbreedingCoeff=0.2702;MQ=62.62;MQ0=17;MQRankSum=0.125;QD=1.76;ReadPosRankSum=1.442;VQSLOD=1.8744;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:46,1:47:48.68:49,0,385	./.	./.	./.	1/1:20,0:22:6.94:29,7,0	1/1:22,0:21:8.67:52,9,0	1/1:21,0:28:4.66:19,5,0	0/0:32,0:32:3.38:0,3,11	1/1:25,0:32:8.42:42,8,0	1/1:13,0:15:2.81:14,3,0	1/1:11,3:14:3.01:31,3,0	0/1:26,0:26:22.42:22,0,78	0/1:23,1:23:56.33:65,0,56	1/1:21,0:25:2.68:14,3,0	0/0:20,0:20:16.07:0,16,254	0/1:12,2:14:11.01:11,0,234	0/1:22,0:28:40.13:40,0,59	0/0:13,0:16:6.01:0,6,66	./.	1/1:15,0:15:9.02:96,9,0	1/1:23,10:32:9.02:96,9,0	0/0:28,0:27:14.21:0,14,203	0/0:15,0:15:12.04:0,12,173	0/0:24,0:24:19.57:0,20,263	1/1:15,0:15:4.40:18,4,0	1/1:15,0:15:6:52,6,0	1/1:5,8:14:13:139,13,0	1/1:12,5:16:0.48:85,0,0
chr10	53497216	.	C	CATAT	7534.44	PASS	AB=0.548;AC=34;AF=0.607;AN=56;BaseQRankSum=4.764;DP=502;FS=7.858;HRun=0;HaplotypeScore=92.4236;InbreedingCoeff=0.8166;MQ=69.02;MQ0=1;MQRankSum=-1.486;QD=23.62;ReadPosRankSum=1.569;VQSLOD=4.0405;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:63.20:0,63,1052	0/0:12,0:12:36.12:0,36,615	1/1:10,0:8:4.21:37,4,0	0/0:11,0:7:11.77:0,12,142	1/1:1,0:26:67.15:306,67,0	1/1:4,0:26:47.56:217,48,0	0/1:3,0:13:27.54:57,0,28	1/1:6,0:38:86.07:428,86,0	1/1:2,0:11:19.48:88,19,0	1/1:6,16:24:53.95:1185,54,0	1/1:3,15:18:30.10:765,30,0	0/0:14,0:14:36.12:0,36,610	0/0:19,0:19:42.14:0,42,726	1/1:1,0:15:22.38:102,22,0	0/0:26,0:26:63.20:0,63,1060	0/0:24,0:24:66.17:0,66,1028	1/1:4,0:19:27.98:127,28,0	1/1:3,0:18:39.17:178,39,0	1/1:1,5:6:16.30:357,16,0	1/1:0,14:14:33.11:807,33,0	1/1:3,3:6:3.01:77,3,0	0/0:17,0:17:39.12:0,39,645	0/0:12,0:13:33.09:0,33,503	0/0:23,0:23:57.16:0,57,932	0/1:3,0:22:4.71:158,0,5	1/1:5,12:18:42.13:909,42,0	1/1:2,17:20:42.14:1050,42,0	1/1:1,11:12:27.09:685,27,0
chr10	53497385	.	GGT	G	1739.66	PASS	AB=0.825;AC=34;AF=0.607;AN=56;BaseQRankSum=6.441;DP=374;FS=0.000;HRun=0;HaplotypeScore=72.1247;InbreedingCoeff=0.0941;MQ=57.07;MQ0=8;MQRankSum=-1.987;QD=5.56;ReadPosRankSum=2.372;VQSLOD=2.5821;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:26,1:27:28.72:29,0,419	0/1:4,2:6:21.90:22,0,125	0/0:14,0:6:3.01:0,3,43	0/0:18,0:15:12.03:0,12,155	1/1:11,6:18:26.73:254,27,0	1/1:12,6:19:20.89:217,21,0	1/1:14,2:14:12.03:136,12,0	1/1:25,0:26:14.76:60,15,0	1/1:3,1:4:2.99:24,3,0	1/1:7,0:11:14.20:79,14,0	0/1:9,0:13:2.63:19,0,3	0/0:6,0:6:6.01:0,6,71	0/1:10,0:10:18.90:19,0,126	1/1:5,4:9:12.03:136,12,0	0/0:11,0:10:12.03:0,12,163	0/1:8,2:10:51.01:51,0,105	0/1:8,0:12:2.29:41,0,2	0/1:10,0:12:6.05:35,0,6	1/1:6,0:11:14.20:70,14,0	0/1:12,0:18:6.39:96,0,6	0/1:11,0:9:8.06:8,0,26	0/1:11,4:16:99:103,0,251	0/1:11,1:11:12.88:13,0,232	0/0:11,0:12:24.07:0,24,342	1/1:10,11:22:35.34:354,35,0	1/1:8,0:15:19.89:97,20,0	0/1:2,0:7:5.59:19,0,6	1/1:3,0:5:5.76:31,6,0
chr10	53497454	.	GAGA	G	719.10	PASS	AB=0.989;AC=18;AF=0.333;AN=54;BaseQRankSum=4.380;DP=308;FS=8.082;HRun=0;HaplotypeScore=81.0557;InbreedingCoeff=0.3684;MQ=33.72;MQ0=34;MQRankSum=-4.595;QD=5.21;ReadPosRankSum=0.839;VQSLOD=1.3578;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:16:33.11:0,33,680	0/0:9,0:8:15.05:0,15,333	./.	0/0:3,0:1:3.01:0,3,33	1/1:8,6:13:7.98:151,8,0	1/1:4,9:14:34.53:387,35,0	1/1:8,8:13:8.82:151,9,0	0/0:23,0:19:22.39:0,22,356	1/1:5,2:7:2.89:74,3,0	0/1:13,0:12:9.39:9,0,246	0/1:9,0:8:0:0,0,0	0/0:7,0:7:8.68:0,9,185	0/0:3,0:3:6.02:0,6,148	1/1:3,7:10:6.35:62,6,0	0/0:15,0:12:11.83:0,12,267	0/0:5,0:4:3.90:0,4,40	0/1:14,0:13:4.49:4,0,80	0/0:7,0:5:8.61:0,9,77	0/1:9,0:7:7.23:7,0,84	0/0:15,0:15:8.90:0,9,110	0/0:16,0:12:3:0,3,29	0/0:7,0:7:11.90:0,12,154	0/0:9,0:8:12.03:0,12,211	0/1:12,0:10:0.57:1,0,209	0/0:11,0:14:4.30:0,4,14	0/0:12,0:12:1.28:0,1,158	1/1:7,0:6:4.86:19,5,0	0/1:8,0:5:7.70:8,0,26
chr10	53497456	.	GA	G	465.97	PASS	AB=0.931;AC=16;AF=0.308;AN=52;BaseQRankSum=5.465;DP=312;FS=0.831;HRun=1;HaplotypeScore=84.2513;InbreedingCoeff=0.3044;MQ=33.46;MQ0=36;MQRankSum=-2.726;QD=3.53;ReadPosRankSum=3.231;VQSLOD=0.3994;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:15:33.11:0,33,486	0/0:10,0:9:14.80:0,15,229	./.	./.	1/1:12,3:12:7.70:51,8,0	1/1:15,0:14:8.51:182,9,0	1/1:17,0:13:8.80:82,9,0	0/0:23,0:19:49.62:0,50,592	0/1:8,0:8:27.29:68,0,27	0/1:14,0:12:8.65:9,0,184	0/1:9,0:8:0:0,0,0	0/0:7,0:7:8.68:0,9,133	0/0:4,0:4:9.01:0,9,120	1/1:11,0:11:3.15:10,3,0	0/0:17,0:14:11.32:0,11,180	0/0:5,0:4:3.48:0,3,38	0/0:14,0:13:15.25:0,15,130	0/0:7,0:5:12.02:0,12,123	0/1:8,1:7:48.97:49,0,69	0/0:14,1:15:8.91:0,9,104	0/0:15,1:12:3:0,3,28	0/0:9,0:8:10.92:0,11,129	0/0:8,0:7:9.03:0,9,134	0/0:13,0:10:12.93:0,13,172	1/1:11,3:14:5.88:79,6,0	0/1:9,3:12:54.71:55,0,139	0/0:7,0:6:2.60:0,3,28	0/1:7,1:5:23.15:36,0,23
chr10	53497457	.	A	AG	550.97	PASS	AB=0.962;AC=15;AF=0.288;AN=52;BaseQRankSum=4.225;DP=311;FS=0.796;HRun=1;HaplotypeScore=86.1064;InbreedingCoeff=0.1599;MQ=33.47;MQ0=36;MQRankSum=-3.160;QD=4.34;ReadPosRankSum=3.432;VQSLOD=0.5320;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:15:27.07:0,27,348	0/0:10,0:9:14.75:0,15,191	./.	./.	1/1:14,0:11:3:12,3,0	1/1:16,0:15:1.42:147,1,0	1/1:16,0:13:7.28:54,7,0	0/0:23,0:19:54.62:0,55,571	0/1:8,0:8:28.69:68,0,29	0/1:13,1:12:99:141,0,150	0/1:8,0:7:0:0,0,0	0/0:7,0:7:8.54:0,9,116	0/0:4,0:4:9.01:0,9,102	0/0:11,0:11:1.48:0,1,7	0/0:17,0:14:11.37:0,11,154	0/0:5,0:4:0.54:0,1,34	0/0:14,0:13:15.04:0,15,164	0/0:7,0:5:12.04:0,12,141	0/1:9,0:7:44:44,0,45	0/0:14,1:15:5.38:0,5,48	0/0:13,3:12:0:0,0,0	0/0:9,0:8:11.70:0,12,129	0/0:8,0:7:9.03:0,9,115	0/0:13,0:10:9.50:0,10,117	1/1:14,0:14:3.48:11,3,0	0/1:11,1:12:99:117,0,120	0/1:6,1:6:23.11:58,0,23	0/1:8,0:5:9.32:38,0,9
chr10	53497463	.	AG	A	838.93	PASS	AB=0.864;AC=18;AF=0.346;AN=52;BaseQRankSum=2.780;DP=283;FS=0.000;HRun=2;HaplotypeScore=73.7806;InbreedingCoeff=0.2533;MQ=33.38;MQ0=33;MQRankSum=-5.187;QD=5.83;ReadPosRankSum=-1.913;VQSLOD=-0.1305;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:10:21.03:0,21,307	0/0:11,0:10:14.76:0,15,189	./.	./.	0/0:13,0:10:1.99:0,2,5	0/1:16,0:15:2.51:3,0,61	0/0:15,0:13:7.74:0,8,51	1/1:18,4:17:46.12:308,46,0	0/1:8,1:9:26.32:26,0,62	0/1:9,2:9:58.76:59,0,94	0/0:5,2:6:0:0,0,0	0/0:7,0:7:8.78:0,9,130	0/1:6,0:6:4.70:5,0,150	0/0:11,0:11:0.62:0,1,2	0/0:17,0:14:12.28:0,12,171	0/0:5,0:4:3.48:0,3,40	1/1:3,8:11:13.28:146,13,0	0/1:5,2:5:6.60:55,0,7	0/1:7,2:7:7.90:100,0,8	1/1:7,5:12:8:59,8,0	0/1:12,5:12:0:0,0,0	0/0:8,0:7:2.16:0,2,7	0/0:7,0:6:6.02:0,6,90	0/0:11,1:9:9.03:0,9,125	0/0:9,1:10:5.82:0,6,41	0/1:9,3:12:28.14:97,0,28	1/1:6,1:6:7.80:54,8,0	1/1:3,2:3:7.27:79,7,0
chr10	53497464	.	G	GA	801.44	PASS	AB=0.950;AC=18;AF=0.360;AN=50;BaseQRankSum=3.434;DP=271;FS=0.000;HRun=1;HaplotypeScore=75.7003;InbreedingCoeff=0.2506;MQ=33.43;MQ0=32;MQRankSum=-6.309;QD=5.72;ReadPosRankSum=-1.603;VQSLOD=-0.3399;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:9:20.99:0,21,291	0/0:11,0:10:14.62:0,15,183	./.	./.	0/0:13,0:10:5.11:0,5,26	0/1:17,0:16:1.86:2,0,70	0/0:13,0:12:11.61:0,12,75	1/1:22,0:17:20.70:218,21,0	0/1:9,0:9:26.47:26,0,62	0/1:9,0:7:72.35:72,0,83	./.	0/0:7,0:7:8.33:0,8,123	0/1:7,0:7:4.70:5,0,147	0/0:11,0:11:0.60:0,1,2	0/0:17,0:14:12.29:0,12,164	0/0:4,0:3:3.48:0,3,41	1/1:12,0:12:5.17:154,5,0	0/1:7,0:5:10.75:35,0,11	0/1:9,1:8:1.10:103,0,1	1/1:11,0:11:8.98:82,9,0	0/1:12,5:12:0:0,0,0	0/0:7,0:6:2.14:0,2,7	0/0:7,0:6:6.02:0,6,83	0/0:11,1:9:8.93:0,9,122	0/0:8,0:8:5.80:0,6,41	0/1:10,1:11:37.26:110,0,37	1/1:2,2:3:5.99:68,6,0	1/1:4,0:2:6.02:76,6,0
chr10	53497470	.	AGAG	A	1251.35	PASS	AB=1.000;AC=18;AF=0.346;AN=52;BaseQRankSum=0.330;DP=295;FS=2.502;HRun=0;HaplotypeScore=74.0874;InbreedingCoeff=0.1935;MQ=34.17;MQ0=35;MQRankSum=-4.137;QD=7.97;ReadPosRankSum=-0.662;VQSLOD=2.7878;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:8:20.28:0,20,244	0/0:13,0:12:15.30:0,15,138	./.	./.	0/1:19,0:16:47.06:99,0,47	0/0:16,5:19:16.93:0,17,143	0/0:12,1:11:12:0,12,111	0/1:26,0:21:20.29:369,0,20	0/1:9,0:9:19.14:59,0,19	0/1:9,0:7:9.91:10,0,46	0/0:9,0:8:0:0,0,0	0/0:7,0:7:9.02:0,9,147	0/0:7,0:7:14.84:0,15,274	0/0:10,0:10:0.66:0,1,2	0/0:14,0:11:17.06:0,17,185	0/0:6,0:5:9.08:0,9,120	0/1:13,0:13:1.31:129,0,1	0/1:8,0:6:46.01:62,0,46	1/1:11,0:9:8.98:238,9,0	1/1:10,0:10:9.46:94,9,0	1/1:20,0:15:0.47:1,0,0	0/0:7,0:6:1.86:0,2,6	0/0:8,0:7:6.02:0,6,80	0/0:11,0:8:6.02:0,6,108	0/1:12,0:11:64.26:64,0,78	0/1:10,0:10:4.66:135,0,5	1/1:4,0:3:6.01:68,6,0	1/1:6,0:3:6.02:74,6,0
chr10	53497472	.	AG	A	1318.28	PASS	AB=0.796;AC=21;AF=0.404;AN=52;BaseQRankSum=0.205;DP=292;FS=0.000;HRun=2;HaplotypeScore=67.2426;InbreedingCoeff=0.1464;MQ=34.30;MQ0=36;MQRankSum=-5.379;QD=7.45;ReadPosRankSum=0.070;VQSLOD=0.6164;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:11:20.23:0,20,244	0/0:10,0:9:15.50:0,16,166	./.	./.	0/1:14,5:15:46.79:99,0,47	0/0:19,1:18:17.43:0,17,141	0/1:11,3:11:21.90:22,0,95	0/1:15,11:21:55.42:357,0,55	0/1:6,3:9:19.47:28,0,19	0/1:8,0:6:0.54:47,0,1	0/0:10,0:9:0:0,0,0	0/0:7,0:7:9.01:0,9,125	0/0:6,0:6:14.84:0,15,203	1/1:6,2:8:0.71:2,1,0	0/0:15,0:12:17.26:0,17,196	0/0:6,0:5:9.65:0,10,95	1/1:8,5:13:2.77:132,3,0	0/1:6,2:6:49.22:62,0,49	0/1:5,7:10:1.06:253,0,1	1/1:2,8:10:9.46:94,9,0	1/1:8,12:15:0.47:1,0,0	0/0:7,0:6:1.86:0,2,6	0/0:8,0:7:6.02:0,6,80	0/0:11,0:8:6.02:0,6,85	0/1:11,2:12:64.33:64,0,68	0/1:6,2:8:5.85:165,0,6	1/1:2,1:2:6.02:68,6,0	1/1:4,2:3:5.39:75,5,0
chr10	53497473	.	G	GA	1607.70	PASS	AB=0.955;AC=22;AF=0.440;AN=50;BaseQRankSum=-0.775;DP=294;FS=0.748;HRun=1;HaplotypeScore=70.0420;InbreedingCoeff=0.1414;MQ=34.61;MQ0=36;MQRankSum=-4.317;QD=9.03;ReadPosRankSum=0.031;VQSLOD=0.8019;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:12:20.20:0,20,243	0/0:10,0:9:15.48:0,15,165	./.	./.	0/1:22,0:18:46.79:100,0,47	0/0:19,0:18:17.32:0,17,131	0/1:15,0:12:47.64:48,0,92	0/1:25,0:20:54.76:372,0,55	0/1:10,0:10:12.87:43,0,13	1/1:6,4:8:3.20:197,3,0	./.	0/0:7,0:7:9.01:0,9,122	0/0:6,0:6:14.83:0,15,186	1/1:8,0:8:0.71:2,1,0	0/0:14,0:11:17.26:0,17,196	0/0:7,0:6:9.65:0,10,92	1/1:6,3:11:1.14:128,1,0	0/1:6,0:5:50.41:62,0,50	0/1:12,0:10:0.73:279,0,1	1/1:8,0:8:8.99:93,9,0	1/1:17,4:16:0.47:1,0,0	0/0:7,0:6:1.35:0,1,6	0/0:8,0:7:6.02:0,6,80	0/0:12,0:9:8.05:0,8,88	0/1:14,0:13:64.35:64,0,67	0/1:3,4:7:7.86:252,0,8	1/1:2,0:2:3.90:40,4,0	1/1:6,0:3:5.39:77,5,0
chr10	53498358	.	GT	G	2287.14	PASS	AB=0.941;AC=14;AF=0.250;AN=56;BaseQRankSum=-1.802;DP=599;FS=8.345;HRun=10;HaplotypeScore=88.0728;InbreedingCoeff=0.8129;MQ=69.85;MQ0=0;MQRankSum=-0.163;QD=15.25;ReadPosRankSum=1.132;VQSLOD=3.5724;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:53.96:0,54,563	0/0:12,0:12:36.09:0,36,394	0/1:12,1:14:12.86:13,0,107	0/1:16,1:16:43.01:43,0,117	1/1:2,21:23:59.97:521,60,0	1/1:1,18:19:47.98:417,48,0	1/1:2,10:12:23.99:208,24,0	0/0:29,0:29:44.58:0,45,297	1/1:2,19:21:47.99:417,48,0	0/0:23,0:23:48.29:0,48,326	0/0:23,0:23:65:0,65,425	0/0:23,0:23:60.16:0,60,664	0/0:19,0:19:51.12:0,51,554	1/1:4,20:24:32.73:445,33,0	0/0:21,0:21:57.15:0,57,631	0/0:23,0:23:63.16:0,63,689	0/0:22,0:22:56.23:0,56,373	0/0:28,0:28:74.10:0,74,493	0/0:16,0:16:38.12:0,38,243	0/0:35,0:35:88.37:0,88,613	0/0:15,0:15:41.43:0,41,274	0/0:21,0:21:54.06:0,54,567	0/0:28,0:29:81.05:0,81,877	0/0:16,0:16:45.12:0,45,498	1/1:2,17:19:47.98:417,48,0	0/0:25,0:25:46.82:0,47,368	0/0:38,0:37:84.55:0,85,582	0/0:10,0:10:23.73:0,24,159
chr10	53499816	.	GGT	G	411.53	PASS	AB=0.946;AC=18;AF=0.346;AN=52;BaseQRankSum=1.450;DP=546;FS=6.551;HRun=0;HaplotypeScore=69.1098;InbreedingCoeff=0.0421;MQ=64.99;MQ0=9;MQRankSum=-1.129;QD=1.63;ReadPosRankSum=-0.736;VQSLOD=0.8241;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:12.01:0,12,119	0/0:7,0:7:9.03:0,9,133	./.	./.	0/1:23,1:25:28.43:28,0,154	0/0:15,0:14:6.02:0,6,88	0/0:14,0:14:3.01:0,3,45	0/0:28,0:27:2.94:0,3,18	0/1:15,0:15:26.32:26,0,35	1/1:15,2:17:3.01:32,3,0	1/1:10,3:15:5.85:47,6,0	0/0:21,0:21:6.02:0,6,89	0/0:20,0:20:9.01:0,9,112	0/0:21,0:21:9:0,9,81	0/0:20,0:18:12.04:0,12,178	0/0:17,0:17:3.01:0,3,45	0/1:20,5:25:37.82:38,0,219	0/1:15,0:15:18.17:18,0,38	0/1:25,2:25:19.14:19,0,121	1/1:14,1:15:3.01:32,3,0	0/1:43,1:42:23.52:141,0,24	0/0:18,0:17:3:0,3,44	0/1:14,0:14:40.90:41,0,75	0/0:22,0:22:12.88:0,13,286	0/1:16,2:17:30.49:30,0,85	1/1:15,2:17:3:32,3,0	0/0:24,0:23:20.94:0,21,197	1/1:3,2:6:8.85:79,9,0
chr10	53500174	.	TC	T	4498.69	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=1.564;DP=526;FS=5.482;HRun=1;HaplotypeScore=61.4172;InbreedingCoeff=0.9869;MQ=74.41;MQ0=0;MQRankSum=-0.231;QD=34.08;ReadPosRankSum=2.336;VQSLOD=4.6140;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:69.18:0,69,948	0/0:6,0:6:18.05:0,18,249	0/0:10,0:10:26.75:0,27,307	0/0:10,0:10:28.56:0,29,286	1/1:0,32:32:81.01:983,81,0	1/1:0,30:30:81.27:1131,81,0	1/1:0,13:13:27.09:377,27,0	0/0:33,0:33:99:0,99,1432	1/1:0,20:20:48.16:670,48,0	0/0:21,0:21:63.19:0,63,879	0/0:16,0:16:48.07:0,48,639	0/0:13,0:13:39.10:0,39,539	0/0:23,0:23:69.22:0,69,1004	1/1:0,18:18:45.15:625,45,0	0/0:28,0:28:84.27:0,84,1236	0/0:17,0:17:9.77:0,10,637	0/0:16,0:16:48.16:0,48,699	0/0:16,0:16:45.15:0,45,670	0/0:16,0:16:48.14:0,48,667	0/0:17,0:17:51.04:0,51,657	0/0:11,0:11:33.11:0,33,492	0/0:18,0:18:54.17:0,54,787	0/0:17,0:17:51.16:0,51,740	0/0:23,0:23:66.19:0,66,946	1/1:0,19:19:51.17:712,51,0	0/0:22,0:22:66.22:0,66,968	0/0:30,0:30:90.27:0,90,1286	0/0:7,0:7:21.04:0,21,272
chr10	53501620	.	C	CA	12960.02	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=4.275;DP=436;FS=14.447;HRun=1;HaplotypeScore=61.2390;InbreedingCoeff=0.9719;MQ=86.62;MQ0=0;MQRankSum=-3.484;QD=45.80;ReadPosRankSum=-0.218;VQSLOD=2.7032;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:27.09:0,27,377	0/0:4,0:4:9.03:0,9,126	0/0:25,0:25:68.56:0,69,868	0/0:6,0:6:15.93:0,16,196	1/1:1,21:22:60.20:959,60,0	1/1:0,24:24:66.23:1055,66,0	1/1:0,7:7:21.07:336,21,0	1/1:0,24:24:72.25:1149,72,0	1/1:0,4:4:9.03:144,9,0	1/1:0,18:18:54.17:837,54,0	1/1:0,16:16:48.16:766,48,0	0/0:17,0:17:51.17:0,51,710	0/0:13,0:13:39.09:0,39,522	1/1:0,17:17:48.16:767,48,0	0/0:22,0:22:66.21:0,66,905	0/0:21,0:21:63.18:0,63,860	1/1:0,15:15:42.14:671,42,0	1/1:0,15:15:45.15:719,45,0	1/1:2,13:15:45.14:695,45,0	1/1:0,20:20:60.20:959,60,0	1/1:0,5:5:9.03:144,9,0	0/0:7,0:7:21.07:0,21,293	0/0:17,0:17:51.17:0,51,712	0/0:11,0:11:33.11:0,33,461	1/1:0,21:21:63.21:1007,63,0	1/1:0,20:20:60.19:929,60,0	1/1:0,23:23:63.21:1007,63,0	1/1:0,17:17:51.17:815,51,0
chr10	53502809	.	TACAC	T	999.24	PASS	AB=0.744;AC=12;AF=0.231;AN=52;BaseQRankSum=1.212;DP=609;FS=3.896;HRun=0;HaplotypeScore=114.7364;InbreedingCoeff=0.7184;MQ=59.73;MQ0=11;MQRankSum=0.002;QD=7.04;ReadPosRankSum=0.761;VQSLOD=2.2538;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:46:63.04:0,63,1084	0/0:12,0:12:24.03:0,24,406	./.	./.	1/1:17,6:24:5.87:135,6,0	1/1:12,8:20:12.04:187,12,0	1/1:11,5:16:5.66:93,6,0	0/0:23,0:22:18.60:0,19,183	1/1:15,8:23:18.06:281,18,0	0/0:12,0:19:30.09:0,30,458	0/0:10,0:13:5.52:0,6,104	0/0:18,0:18:17.95:0,18,255	0/0:19,0:19:33.11:0,33,584	1/1:17,4:21:7.74:242,8,0	0/0:16,0:16:21.07:0,21,440	0/0:18,0:22:27.36:0,27,437	0/0:24,0:30:47.90:0,48,816	0/0:17,0:27:66.23:0,66,1245	0/1:12,0:16:1.33:1,0,47	0/0:19,0:23:29.23:0,29,472	0/0:26,0:28:30.10:0,30,526	0/0:16,0:17:32.82:0,33,579	0/0:7,0:7:6.02:0,6,84	0/0:32,0:34:47.36:0,47,844	0/1:12,10:22:5.72:216,0,6	0/0:10,0:11:15.94:0,16,276	0/0:23,0:25:33.05:0,33,510	0/0:7,0:7:12.02:0,12,184
chr10	53502906	.	C	CA	5016.87	PASS	AB=1.000;AC=24;AF=0.429;AN=56;BaseQRankSum=0.373;DP=584;FS=2.504;HRun=9;HaplotypeScore=72.2916;InbreedingCoeff=0.8499;MQ=80.93;MQ0=0;MQRankSum=-1.257;QD=19.83;ReadPosRankSum=-0.689;VQSLOD=5.1717;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,113,984	0/0:12,0:12:29.98:0,30,257	0/1:19,0:18:9.67:10,0,181	0/1:15,0:15:8.89:9,0,86	0/0:25,0:25:53.95:0,54,469	0/0:22,0:22:58.22:0,58,518	0/0:25,0:25:65.93:0,66,564	1/1:7,24:34:71.66:710,72,0	0/0:32,0:32:77.92:0,78,669	1/1:4,15:19:45.12:498,45,0	1/1:1,17:18:22.08:472,22,0	0/0:20,0:20:53.96:0,54,464	0/0:15,0:15:35.97:0,36,312	0/0:26,0:26:71.98:0,72,625	0/0:20,0:20:53.99:0,54,469	0/0:19,0:19:47.99:0,48,417	1/1:4,23:27:39.98:652,40,0	1/1:7,23:30:40.89:653,41,0	1/1:6,12:18:13.03:362,13,0	1/1:0,10:10:24.95:267,25,0	1/1:2,13:15:7.05:306,7,0	0/0:16,0:16:44.99:0,45,390	0/0:14,0:14:38.99:0,39,339	0/0:21,0:21:56.94:0,57,488	0/0:20,0:20:50.98:0,51,443	1/1:6,16:22:22.04:458,22,0	1/1:5,15:19:41.93:455,42,0	1/1:1,5:6:15.04:166,15,0
chr10	53503781	.	T	TTCTTCCCGACCAATGCA	81135.34	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-0.316;DP=758;FS=6.884;HRun=0;HaplotypeScore=310.5176;InbreedingCoeff=0.9981;MQ=80.15;MQ0=0;MQRankSum=-20.451;QD=167.63;ReadPosRankSum=-3.316;VQSLOD=3.5732;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,114,4937	0/0:10,0:10:30.10:0,30,1265	0/0:30,0:30:81.69:0,82,2791	0/0:28,0:27:75.17:0,75,3053	1/1:21,12:34:63.17:3963,63,0	1/1:13,11:28:63.22:4662,63,0	1/1:17,5:23:60.21:4328,60,0	1/1:48,0:48:99:7468,135,0	1/1:23,20:44:99:9166,120,0	1/1:25,6:34:99:5961,99,0	1/1:13,5:19:45.11:2684,45,0	0/0:30,0:30:81.27:0,81,3640	0/0:23,0:23:69.24:0,69,2985	1/1:14,20:37:99:7867,105,0	0/0:29,0:29:84.29:0,84,3789	0/0:32,0:32:93.30:0,93,4259	1/1:10,2:16:33.08:2114,33,0	1/1:7,1:9:18.06:1288,18,0	1/1:18,6:26:72.68:4099,73,0	1/1:16,13:31:87.22:5586,87,0	1/1:20,7:30:54.19:3819,54,0	0/0:16,0:16:45.15:0,45,2025	0/0:8,0:8:21.07:0,21,979	0/0:27,0:27:81.28:0,81,3501	1/1:14,8:26:63.22:4345,63,0	1/1:18,12:35:99:5872,99,0	1/1:15,13:33:84.29:5707,84,0	1/1:7,4:11:33.11:2208,33,0
chr10	53504241	.	TA	T	1657.88	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=17.584;DP=676;FS=1.431;HRun=3;HaplotypeScore=80.8747;InbreedingCoeff=0.9726;MQ=84.51;MQ0=0;MQRankSum=-6.596;QD=9.01;ReadPosRankSum=2.967;VQSLOD=1.1047;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:96.29:0,96,1342	0/0:7,0:7:21.07:0,21,302	0/0:24,0:24:69.11:0,69,907	0/0:24,0:24:66.19:0,66,919	0/0:32,0:32:93.30:0,93,1306	0/0:23,0:23:69.08:0,69,895	0/0:29,0:29:84.22:0,84,1135	0/0:30,0:30:81.26:0,81,1135	0/0:16,0:16:48.16:0,48,691	1/1:24,1:25:8.99:222,9,0	1/1:18,2:20:51.05:262,51,0	0/0:28,0:28:84.24:0,84,1181	0/0:19,0:19:54.14:0,54,720	0/0:21,0:21:63.21:0,63,904	0/0:36,0:36:99:0,105,1493	0/0:22,0:22:63.21:0,63,907	0/0:26,0:26:78.15:0,78,1019	0/0:24,0:24:72.22:0,72,1016	1/1:19,1:20:44.34:215,44,0	1/1:27,0:27:65:295,65,0	1/1:27,0:27:66.43:276,66,0	0/0:25,0:25:75.24:0,75,1059	0/0:20,0:20:60.15:0,60,775	0/0:29,0:29:87.28:0,87,1232	0/0:23,0:23:69.23:0,69,994	1/1:26,0:26:10.83:191,11,0	1/1:27,0:26:49.62:291,50,0	1/1:12,0:12:8.94:107,9,0
chr10	53504244	.	AC	A	6272.94	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=13.831;DP=688;FS=0.000;HRun=3;HaplotypeScore=66.3447;InbreedingCoeff=0.9993;MQ=85.22;MQ0=0;MQRankSum=-0.235;QD=33.91;ReadPosRankSum=2.053;VQSLOD=5.3420;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:96.21:0,96,1308	0/0:7,0:7:21.07:0,21,302	0/0:25,0:25:63.16:0,63,862	0/0:25,0:25:65.38:0,65,936	0/0:31,0:31:93.30:0,93,1320	0/0:24,0:24:63.20:0,63,885	0/0:31,0:31:87.25:0,87,1195	0/0:32,0:32:87.23:0,87,1182	0/0:18,0:18:54.15:0,54,738	1/1:2,23:25:69.19:829,69,0	1/1:2,18:20:57.18:699,57,0	0/0:30,0:30:90.25:0,90,1225	0/0:17,0:17:45.15:0,45,647	0/0:22,0:22:66.21:0,66,921	0/0:36,0:36:99:0,105,1510	0/0:21,0:21:63.21:0,63,907	0/0:25,0:25:66.22:0,66,946	0/0:24,0:24:69.23:0,69,993	1/1:3,17:20:57.13:672,57,0	1/1:0,27:27:81.04:945,81,0	1/1:0,28:28:75.24:929,75,0	0/0:26,0:26:78.24:0,78,1101	0/0:22,0:22:63.19:0,63,864	0/0:30,0:30:87.26:0,87,1226	0/0:24,0:24:69.23:0,69,993	1/1:2,24:26:71.25:861,71,0	1/1:1,26:26:75.24:929,75,0	1/1:1,11:12:33.10:409,33,0
chr10	53505348	.	G	GTA	10649.45	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-2.422;DP=1037;FS=1.623;HRun=0;HaplotypeScore=194.2650;InbreedingCoeff=0.9981;MQ=63.23;MQ0=7;MQRankSum=-2.713;QD=36.60;ReadPosRankSum=1.357;VQSLOD=5.3196;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,117,1577	0/0:15,0:15:36.09:0,36,478	0/0:42,0:29:75.03:0,75,868	0/0:39,0:31:46.77:0,47,723	0/0:37,0:37:54.10:0,54,726	0/0:19,0:19:39.11:0,39,524	0/0:48,0:48:99:0,111,1376	0/0:51,0:50:99:0,135,1765	0/0:44,0:44:81.02:0,81,1019	1/1:21,36:56:99:2561,156,0	1/1:2,20:21:23.98:439,24,0	0/0:40,0:40:99:0,114,1574	0/0:38,0:38:99:0,105,1362	0/0:38,0:37:75.18:0,75,1019	0/0:45,0:45:99:0,126,1712	0/0:41,0:41:99:0,105,1522	0/0:35,0:35:85.96:0,86,1051	0/0:32,0:32:58.08:0,58,944	1/1:2,35:37:93.13:1668,93,0	1/1:4,26:30:42.09:729,42,0	1/1:5,61:67:99:2141,117,0	0/0:36,0:35:99:0,99,1233	0/0:27,0:27:69.08:0,69,868	0/0:49,0:49:99:0,126,1722	0/0:22,0:22:18.06:0,18,257	1/1:1,40:41:99:1854,117,0	1/1:0,19:20:42.14:763,42,0	1/1:1,15:16:27.09:494,27,0
chr10	53505393	.	TGC	T	3796.10	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=2.687;DP=993;FS=11.750;HRun=0;HaplotypeScore=224.7786;InbreedingCoeff=0.7035;MQ=52.94;MQ0=11;MQRankSum=4.032;QD=13.18;ReadPosRankSum=-5.747;VQSLOD=1.2917;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:53,1:54:99:0,138,2612	0/0:15,0:15:39.04:0,39,709	0/0:38,0:25:56.14:0,56,1000	0/0:45,0:22:53.34:0,53,878	1/1:1,36:37:42.04:643,42,0	1/1:0,17:17:14.97:229,15,0	1/1:10,28:38:78.06:1141,78,0	0/1:40,0:31:93.31:93,0,286	1/1:2,37:39:63.14:960,63,0	0/0:52,0:49:8.81:0,9,769	0/0:17,0:16:11.75:0,12,105	0/0:29,0:29:81.24:0,81,1514	0/0:32,0:32:96.19:0,96,1664	1/1:4,28:30:29.81:455,30,0	0/0:46,0:46:99:0,132,2343	0/0:41,0:41:99:0,123,2238	0/0:33,0:32:37.80:0,38,550	0/0:28,0:27:51.34:0,51,638	0/0:23,0:21:26.75:0,27,382	0/0:28,0:28:35.98:0,36,309	0/0:92,0:91:27.69:0,28,1303	0/0:34,0:34:99:0,102,1731	0/0:23,0:23:63.12:0,63,1067	0/0:56,0:56:99:0,128,2611	1/1:4,26:30:15:229,15,0	0/1:32,0:31:38.56:39,0,505	0/0:19,0:19:6.01:0,6,355	0/1:23,0:23:6.92:7,0,382
chr10	53505451	.	TGTGA	T	1217.17	PASS	AB=0.811;AC=12;AF=0.214;AN=56;BaseQRankSum=8.046;DP=927;FS=7.312;HRun=0;HaplotypeScore=238.4296;InbreedingCoeff=0.7526;MQ=46.79;MQ0=54;MQRankSum=-1.977;QD=8.34;ReadPosRankSum=-2.435;VQSLOD=1.7104;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:98.42:0,98,2382	0/0:13,0:12:27.09:0,27,687	0/0:28,0:5:8.17:0,8,140	0/0:29,0:6:4.74:0,5,53	1/1:11,14:25:7.94:99,8,0	1/1:0,8:8:1.99:56,2,0	1/1:9,19:28:25.70:399,26,0	0/0:57,0:42:86.19:0,86,2235	1/1:8,18:26:34.73:521,35,0	0/0:41,0:38:87.88:0,88,2170	0/0:17,0:16:5.88:0,6,120	0/0:44,0:44:99:0,126,3202	0/0:37,0:37:84.11:0,84,2598	1/1:4,14:17:17.06:298,17,0	0/0:52,0:52:99:0,153,3694	0/0:28,0:28:80.48:0,80,2017	0/0:28,0:28:74.04:0,74,1673	0/0:24,0:23:39.72:0,40,1296	0/0:34,0:24:69.20:0,69,1515	0/1:18,0:17:5.71:6,0,308	0/0:105,0:101:99:0,174,4265	0/0:29,0:28:63.21:0,63,1556	0/0:18,1:19:39.13:0,39,1024	0/0:73,0:72:99:0,193,4648	0/1:9,14:22:0.02:0,0,1	0/0:40,0:37:66.33:0,66,2120	0/0:19,0:17:48.16:0,48,1254	0/0:18,0:18:47.46:0,47,1034
chr10	53505483	.	AGT	A	4418.32	PASS	AB=0.620;AC=29;AF=0.518;AN=56;BaseQRankSum=12.400;DP=739;FS=32.329;HRun=0;HaplotypeScore=176.4340;InbreedingCoeff=0.7043;MQ=47.07;MQ0=31;MQRankSum=-8.422;QD=13.68;ReadPosRankSum=-1.698;VQSLOD=3.0051;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:96.24:0,96,1516	0/0:14,0:13:28.30:0,28,431	0/0:21,0:4:7.58:0,8,119	0/0:32,1:10:20.79:0,21,324	1/1:3,9:12:0.44:1,0,0	1/1:3,2:5:2.90:39,3,0	1/1:10,10:20:2.99:39,3,0	1/1:14,15:21:39.01:470,39,0	1/1:6,12:18:18.69:280,19,0	1/1:15,7:20:13.95:335,14,0	0/1:6,5:10:0.24:0,0,0	0/0:44,0:44:99:0,126,2021	0/0:39,0:39:99:0,104,1597	1/1:6,10:15:12.74:157,13,0	0/0:56,0:56:99:0,153,2507	0/0:27,0:27:78.25:0,78,1278	1/1:10,13:23:32.46:481,32,0	1/1:7,10:16:32.91:434,33,0	0/1:9,2:25:13.42:377,0,13	1/1:4,3:6:5.75:51,6,0	1/1:39,36:71:61.88:756,62,0	0/0:33,0:32:57.18:0,57,939	0/0:19,0:19:29.90:0,30,421	0/0:70,0:69:99:0,180,2840	0/0:16,2:17:0.84:0,1,3	0/1:5,14:17:25.98:439,0,26	1/1:7,7:13:30.02:340,30,0	1/1:2,5:7:18.04:219,18,0
chr10	53505505	.	TGTGA	T	1041.32	PASS	AB=0.964;AC=30;AF=0.536;AN=56;BaseQRankSum=12.087;DP=648;FS=21.342;HRun=0;HaplotypeScore=222.8158;InbreedingCoeff=0.5922;MQ=47.65;MQ0=9;MQRankSum=-9.466;QD=4.32;ReadPosRankSum=-1.249;VQSLOD=1.1497;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,120,2920	0/0:15,0:15:36.51:0,37,853	0/0:24,0:7:10.05:0,10,216	0/0:29,0:14:20.83:0,21,354	0/1:10,2:12:0.04:0,0,1	1/1:5,0:5:2.36:12,2,0	1/1:12,0:12:1.36:9,1,0	1/1:5,0:5:2.48:20,2,0	1/1:17,4:21:10.16:94,10,0	1/1:10,0:10:19.92:125,20,0	0/1:9,0:9:0.08:0,0,1	0/0:44,0:44:99:0,123,2759	0/0:38,0:38:99:0,111,2432	1/1:14,3:17:1.33:11,1,0	0/0:55,0:55:99:0,156,3877	0/0:37,0:37:99:0,108,2571	0/1:20,0:20:7.98:180,0,8	0/1:17,0:16:18.60:140,0,19	1/1:20,0:20:3.22:140,3,0	1/1:6,0:5:2.47:23,2,0	1/1:51,0:47:5.53:50,6,0	0/0:33,0:33:69.14:0,69,1494	0/0:24,0:24:33.56:0,34,736	0/0:63,0:63:99:0,177,4365	1/1:9,1:10:1.95:17,2,0	1/1:14,0:13:25.37:202,25,0	1/1:8,0:7:14.52:137,15,0	1/1:4,0:4:8.93:63,9,0
chr10	53505507	.	TGA	T	1805.27	PASS	AB=0.754;AC=31;AF=0.554;AN=56;BaseQRankSum=12.449;DP=647;FS=30.202;HRun=0;HaplotypeScore=202.8011;InbreedingCoeff=0.6919;MQ=47.64;MQ0=10;MQRankSum=-9.430;QD=7.62;ReadPosRankSum=-2.610;VQSLOD=1.4045;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,120,2096	0/0:15,0:15:18.38:0,18,592	0/0:24,0:7:13.80:0,14,178	0/0:29,0:14:8.99:0,9,248	0/1:8,4:12:0.31:0,0,0	1/1:4,1:5:2.80:23,3,0	1/1:8,3:11:2.88:45,3,0	1/1:4,0:4:4.30:26,4,0	1/1:15,5:20:12.02:96,12,0	1/1:8,3:11:23.59:241,24,0	0/1:6,3:9:0.31:0,0,0	0/0:43,0:43:99:0,126,2039	0/0:39,0:39:99:0,113,1768	1/1:9,7:16:2.95:24,3,0	0/0:57,0:57:99:0,162,2866	0/0:39,0:39:99:0,114,1836	1/1:14,6:20:33.51:319,34,0	0/1:11,5:15:28.23:228,0,28	1/1:17,3:20:8.13:281,8,0	1/1:3,3:5:2.25:12,2,0	1/1:38,11:46:10.11:78,10,0	0/0:33,0:33:54.82:0,55,1093	0/0:24,0:24:32.84:0,33,519	0/0:61,1:62:99:0,177,3129	1/1:8,3:11:2.65:17,3,0	1/1:7,7:13:17.95:367,18,0	1/1:5,3:8:14.99:179,15,0	1/1:2,2:4:8.93:63,9,0
chr10	53505509	.	AGT	A	530.46	PASS	AB=1.000;AC=15;AF=0.278;AN=54;BaseQRankSum=9.423;DP=641;FS=10.772;HRun=0;HaplotypeScore=204.4862;InbreedingCoeff=0.3261;MQ=47.79;MQ0=10;MQRankSum=-8.235;QD=3.87;ReadPosRankSum=-0.518;VQSLOD=1.5156;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,111,1805	0/0:17,0:17:3.61:0,4,519	0/0:26,0:7:15.35:0,15,202	0/0:29,0:12:16.09:0,16,176	0/0:12,0:12:2.37:0,2,12	0/0:5,0:5:0.25:0,0,9	1/1:11,0:11:3:27,3,0	0/0:2,0:2:2.88:0,3,15	0/1:18,0:18:12.36:23,0,12	1/1:9,0:9:6.19:76,6,0	0/0:9,1:10:2.48:0,2,13	0/0:42,0:42:99:0,105,1663	0/0:38,0:38:93.31:0,93,1479	0/1:18,0:18:1.59:2,0,7	0/0:57,0:57:99:0,150,2408	0/0:41,0:41:99:0,105,1679	1/1:19,0:19:2.74:93,3,0	0/1:15,0:14:30.26:86,0,30	0/1:20,0:20:14.53:126,0,15	1/1:6,0:5:2.25:11,2,0	0/0:43,2:41:3.20:0,3,8	0/0:32,1:33:16.01:0,16,808	0/0:23,0:23:28.01:0,28,429	0/0:63,0:63:99:0,160,2600	0/0:11,0:12:2.13:0,2,11	0/1:13,0:12:0.52:154,0,1	1/1:8,0:7:8.99:77,9,0	./.
chr10	53505517	.	T	TGA	1108.32	PASS	AB=0.881;AC=23;AF=0.426;AN=54;BaseQRankSum=10.656;DP=676;FS=52.679;HRun=0;HaplotypeScore=218.9132;InbreedingCoeff=0.3933;MQ=47.36;MQ0=12;MQRankSum=-6.541;QD=5.54;ReadPosRankSum=-4.534;VQSLOD=0.9090;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,114,1696	0/0:17,0:17:39.06:0,39,531	0/0:31,0:6:17.93:0,18,203	0/0:30,0:11:23.33:0,23,245	1/1:11,2:13:5.56:27,6,0	1/1:5,3:8:8.92:101,9,0	1/1:12,1:13:5.41:23,5,0	0/1:5,0:5:12.98:14,0,13	1/1:16,4:20:21.01:181,21,0	1/1:6,3:9:2.44:188,2,0	0/1:8,2:10:5.86:20,0,6	0/0:39,0:39:99:0,114,1621	0/0:42,0:42:99:0,114,1567	1/1:18,4:22:9.98:93,10,0	0/0:59,0:59:99:0,159,2319	0/0:40,0:40:99:0,117,1643	0/1:15,4:19:41.41:175,0,41	0/1:11,5:15:12.69:162,0,13	0/1:21,0:20:21.17:100,0,21	1/1:6,2:7:6.47:24,6,0	0/0:37,9:41:3.82:0,4,16	0/0:32,0:32:62.98:0,63,864	0/0:24,0:24:29.36:0,29,413	0/0:66,0:66:99:0,180,2572	1/1:11,3:13:8.70:63,9,0	0/1:17,1:17:66.39:116,0,66	0/1:3,1:3:2.48:2,0,17	./.
chr10	53505523	.	AGT	A	2712.09	PASS	AC=32;AF=0.593;AN=54;BaseQRankSum=12.637;DP=695;FS=59.508;HRun=0;HaplotypeScore=216.0320;InbreedingCoeff=0.8839;MQ=48.01;MQ0=13;MQRankSum=-6.622;QD=10.47;ReadPosRankSum=-7.841;VQSLOD=0.1760;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,108,1795	0/0:17,0:17:31.27:0,31,434	0/0:34,0:6:8.98:0,9,104	0/0:33,0:12:22.42:0,22,230	1/1:10,2:12:9.34:104,9,0	1/1:6,3:9:8.85:81,9,0	1/1:14,0:14:5.99:78,6,0	1/1:0,10:10:21.04:254,21,0	1/1:13,7:20:24.22:234,24,0	1/1:8,2:10:0.52:211,1,0	1/1:10,1:11:8.97:102,9,0	0/0:38,0:38:93.29:0,93,1510	0/0:40,0:40:99:0,111,1767	1/1:17,6:23:15.18:171,15,0	0/0:57,0:57:99:0,138,2151	0/0:41,0:41:99:0,111,1806	1/1:13,3:16:14.27:179,14,0	1/1:15,1:15:27.86:246,28,0	1/1:21,2:21:35.69:333,36,0	1/1:10,1:10:11.53:148,12,0	1/1:42,5:42:12.80:142,13,0	0/0:32,0:32:56.98:0,57,907	0/0:28,0:28:31.48:0,31,482	0/0:65,0:65:99:0,156,2476	1/1:11,3:13:7.15:81,7,0	1/1:13,4:17:38.86:414,39,0	1/1:5,1:5:12.04:148,12,0	./.
chr10	53505573	.	AGT	A	108.57	PASS	AB=0.982;AC=7;AF=0.125;AN=56;BaseQRankSum=8.310;DP=955;FS=22.971;HRun=0;HaplotypeScore=281.7823;InbreedingCoeff=0.0230;MQ=46.84;MQ0=16;MQRankSum=0.365;QD=0.50;ReadPosRankSum=-2.079;VQSLOD=0.9945;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,111,1767	0/0:26,0:25:51.03:0,51,745	0/0:17,0:6:11.19:0,11,94	0/0:28,0:8:5.35:0,5,103	0/0:21,0:20:10.34:0,10,196	0/0:11,0:11:10.89:0,11,152	0/0:19,0:18:20.38:0,20,314	0/0:35,0:27:39.04:0,39,485	0/0:32,0:32:35.79:0,36,459	0/1:50,0:49:30.54:31,0,253	0/0:29,0:28:2.19:0,2,11	0/0:43,0:43:96.30:0,96,1570	0/0:49,0:48:99:0,138,2023	0/0:24,0:23:11.94:0,12,242	0/0:37,0:36:87.28:0,87,1431	0/0:49,0:49:99:0,126,2040	0/1:28,0:27:2.28:2,0,468	0/0:26,0:24:50.68:0,51,680	0/1:28,2:19:18.94:98,0,19	1/1:33,1:33:1.98:5,2,0	0/0:100,1:96:11.65:0,12,64	0/0:43,0:43:39.95:0,40,644	0/1:39,0:38:15:15,0,294	0/0:57,0:57:99:0,126,2010	0/0:18,0:17:4.73:0,5,98	0/1:37,1:36:69.58:70,0,78	0/0:8,0:7:5.89:0,6,35	0/0:15,0:15:26.55:0,27,114
chr10	53505585	.	A	AGT	4988.16	PASS	AB=1.000;AC=31;AF=0.554;AN=56;BaseQRankSum=11.346;DP=998;FS=29.608;HRun=0;HaplotypeScore=276.6649;InbreedingCoeff=0.7244;MQ=46.42;MQ0=20;MQRankSum=-2.089;QD=9.22;ReadPosRankSum=0.319;VQSLOD=3.3162;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,104,1250	0/0:26,0:25:41.77:0,42,491	0/0:26,0:7:16.96:0,17,141	0/0:27,0:6:1:0,1,65	1/1:17,4:19:11.73:200,12,0	1/1:5,6:11:9.03:140,9,0	1/1:12,7:17:15.05:233,15,0	1/1:26,9:23:30.02:413,30,0	1/1:15,13:28:32.89:483,33,0	0/1:59,0:57:18.97:519,0,19	1/1:30,0:29:19.25:79,19,0	0/0:47,0:47:99:0,105,1258	0/0:53,0:52:99:0,134,1606	1/1:12,9:20:14.79:239,15,0	0/0:43,0:42:89.85:0,90,1111	0/0:50,0:50:99:0,118,1440	1/1:8,24:31:28.59:583,29,0	1/1:6,18:23:28.47:502,28,0	1/1:24,0:16:17.12:98,17,0	1/1:41,0:40:40.57:262,41,0	1/1:115,0:110:87.57:592,88,0	0/0:44,0:44:39.12:0,39,486	0/0:38,0:37:27.99:0,28,319	0/0:53,0:53:99:0,116,1458	1/1:9,6:14:8.38:114,8,0	0/1:40,0:38:23.42:343,0,23	0/1:10,0:9:3.13:66,0,3	1/1:15,0:15:3.84:123,4,0
chr10	53505595	.	TGA	T	72.98	PASS	AB=0.909;AC=5;AF=0.089;AN=56;BaseQRankSum=6.717;DP=1019;FS=6.184;HRun=0;HaplotypeScore=297.7537;InbreedingCoeff=-0.1071;MQ=46.46;MQ0=17;MQRankSum=-6.284;QD=0.58;ReadPosRankSum=-3.910;VQSLOD=1.2975;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,113,1974	0/0:22,0:21:36.07:0,36,741	0/1:30,0:9:8.04:8,0,194	0/0:33,0:7:3.90:0,4,114	0/0:16,5:19:10.92:0,11,105	0/1:7,2:9:21.09:21,0,30	0/0:15,2:15:15.22:0,15,130	0/1:31,0:21:54.70:55,0,307	0/1:15,9:24:93.01:93,0,110	0/0:61,0:61:99:0,136,2332	0/0:34,1:35:27.41:0,27,465	0/0:45,0:45:99:0,108,1866	0/0:54,0:53:99:0,141,2533	0/0:16,5:20:1.44:0,1,101	0/0:45,0:44:99:0,102,1792	0/0:51,0:51:99:0,127,2200	0/1:32,0:31:2.20:2,0,295	0/0:28,0:27:34.60:0,35,345	0/0:17,0:12:32.47:0,32,500	0/0:43,0:43:44.50:0,45,620	0/0:122,0:117:99:0,118,2036	0/0:42,0:42:45.13:0,45,802	0/0:40,0:39:19.96:0,20,571	0/0:57,0:58:99:0,138,2348	0/0:16,0:15:8.61:0,9,112	0/0:42,0:40:97.23:0,97,1692	0/0:13,0:12:19.20:0,19,317	0/0:17,0:17:30.05:0,30,593
chr10	53505601	.	AGCGTGTGT	A	477.78	PASS	AB=0.891;AC=10;AF=0.179;AN=56;BaseQRankSum=7.806;DP=981;FS=2.185;HRun=0;HaplotypeScore=352.7662;InbreedingCoeff=0.0412;MQ=47.15;MQ0=13;MQRankSum=-4.295;QD=2.83;ReadPosRankSum=-1.847;VQSLOD=0.8539;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,100,4315	0/1:18,0:18:4.80:5,0,1262	0/0:32,0:11:31.31:0,31,736	0/1:35,0:8:9.89:10,0,341	0/1:12,5:18:18.95:32,0,19	0/1:6,2:8:20.93:62,0,21	0/1:18,2:18:49.33:96,0,49	0/0:28,0:21:44.44:0,44,1184	1/1:13,9:22:13.97:324,14,0	0/0:61,0:61:92.12:0,92,5602	0/0:32,0:33:26.41:0,26,1038	0/0:37,0:37:89.88:0,90,3192	0/0:53,0:52:84.44:0,84,4621	0/1:13,5:17:27.67:56,0,28	0/0:47,0:46:99:0,105,3977	0/0:45,0:46:99:0,111,3890	0/0:29,0:31:40.24:0,40,1233	0/0:26,0:25:41.15:0,41,1415	0/0:16,0:11:30.10:0,30,994	0/0:42,0:42:19.65:0,20,1586	0/0:113,0:113:99:0,126,4726	0/0:35,0:39:45.05:0,45,1684	0/0:36,0:38:44.37:0,44,1433	0/0:56,0:56:99:0,132,5098	0/1:14,0:13:26.63:27,0,61	0/0:45,0:44:84.82:0,85,3278	0/1:12,0:11:11.02:11,0,753	0/0:17,0:17:26.46:0,26,1510
chr10	53505609	.	T	TGA	244.96	PASS	AB=0.917;AC=5;AF=0.089;AN=56;BaseQRankSum=3.703;DP=1003;FS=6.710;HRun=0;HaplotypeScore=290.3606;InbreedingCoeff=0.1842;MQ=46.40;MQ0=17;MQRankSum=-1.954;QD=3.71;ReadPosRankSum=-1.714;VQSLOD=1.3615;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,110,1629	0/0:21,0:20:41.92:0,42,533	0/0:29,0:11:30.73:0,31,392	0/0:38,0:7:12.27:0,12,182	0/0:17,3:19:8.69:0,9,117	1/1:8,0:8:3.01:42,3,0	0/1:16,5:19:90.04:141,0,90	0/0:33,0:23:51.15:0,51,725	0/1:20,0:20:99:114,0,157	0/0:63,0:60:99:0,173,2369	0/0:31,0:31:23.16:0,23,368	0/0:37,0:37:87.10:0,87,1178	0/0:55,0:54:99:0,135,1835	0/1:16,1:16:61.10:61,0,100	0/0:51,0:50:99:0,104,1507	0/0:43,0:43:95.91:0,96,1404	0/0:32,0:31:37.73:0,38,523	0/0:24,0:24:39.13:0,39,613	0/0:16,0:11:27.06:0,27,378	0/0:50,0:50:45.64:0,46,683	0/0:116,0:114:99:0,108,1694	0/0:44,0:44:44.36:0,44,649	0/0:40,0:39:44.58:0,45,640	0/0:57,0:58:99:0,134,1895	0/0:13,1:13:3.84:0,4,48	0/0:46,0:42:99:0,114,1464	0/0:12,0:11:26.77:0,27,353	0/0:17,0:17:44.93:0,45,626
chr10	53505625	.	AGT	A	472.83	PASS	AB=0.791;AC=2;AF=0.036;AN=56;BaseQRankSum=0.231;DP=963;FS=12.930;HRun=0;HaplotypeScore=278.3451;InbreedingCoeff=0.2352;MQ=44.73;MQ0=17;MQRankSum=-3.770;QD=8.76;ReadPosRankSum=-2.175;VQSLOD=1.8768;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,107,1772	0/0:22,0:21:44.46:0,44,679	0/0:17,0:8:17.67:0,18,263	0/0:36,0:9:16.46:0,16,176	0/1:22,0:22:0.01:1,0,0	0/0:6,0:5:5.69:0,6,48	0/0:21,0:19:17.43:0,17,295	0/1:9,23:22:13.15:547,0,13	0/0:14,0:14:6.90:0,7,78	0/0:70,0:67:99:0,127,2179	0/0:29,0:29:14.48:0,14,252	0/0:38,0:38:78.24:0,78,1259	0/0:46,0:46:99:0,111,1821	0/0:9,0:9:6:0,6,104	0/0:48,0:48:99:0,102,1606	0/0:41,0:41:64.24:0,64,1101	0/0:29,0:28:33.45:0,33,503	0/0:20,0:20:36.03:0,36,563	0/0:19,0:14:24.87:0,25,349	0/0:46,0:46:35.58:0,36,538	0/0:98,1:98:97.26:0,97,1642	0/0:51,0:51:56.02:0,56,936	0/0:45,0:44:59.84:0,60,1012	0/0:65,1:66:99:0,138,2288	0/0:19,0:19:7.43:0,7,96	0/0:41,0:37:66.74:0,67,1373	0/0:11,0:10:22.16:0,22,275	0/0:17,0:17:45.09:0,45,665
chr10	53505646	.	G	GTGAACA	597.92	PASS	AB=0.950;AC=7;AF=0.125;AN=56;BaseQRankSum=6.949;DP=971;FS=10.487;HRun=0;HaplotypeScore=325.3735;InbreedingCoeff=-0.0215;MQ=40.44;MQ0=31;MQRankSum=-5.423;QD=2.99;ReadPosRankSum=-3.971;VQSLOD=0.4830;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:91.86:0,92,2160	0/0:21,0:20:47.53:0,48,1076	0/0:43,0:3:6.02:0,6,122	0/0:54,0:11:21.54:0,22,485	1/1:28,1:29:1.72:3,2,0	0/0:8,0:7:5.56:0,6,83	0/0:26,0:24:3:0,3,426	0/0:35,0:28:57.16:0,57,1165	0/0:12,0:12:5.44:0,5,124	0/1:61,4:61:99:330,0,2338	0/0:26,1:27:8.75:0,9,198	0/0:37,0:37:71.54:0,72,1599	0/0:51,0:51:99:0,123,2534	0/0:7,0:7:6.02:0,6,144	0/0:51,0:50:79.02:0,79,1859	0/0:38,0:38:67.80:0,68,1587	0/0:20,0:19:12.47:0,12,228	0/0:16,0:16:27.05:0,27,589	0/1:17,1:16:99:188,0,397	0/1:38,3:41:14.21:14,0,733	0/0:85,0:84:75.13:0,75,1721	0/0:47,0:46:47.26:0,47,1153	0/0:44,0:43:60.93:0,61,1512	0/0:62,0:62:99:0,122,2813	0/0:27,0:27:5.71:0,6,144	0/1:36,1:32:99:159,0,1503	0/1:9,0:8:20.61:21,0,283	0/0:16,0:16:38.88:0,39,806
chr10	53505655	.	A	AACATGT	839.82	PASS	AB=0.974;AC=8;AF=0.143;AN=56;BaseQRankSum=8.807;DP=955;FS=22.572;HRun=0;HaplotypeScore=326.9049;InbreedingCoeff=-0.0666;MQ=40.60;MQ0=33;MQRankSum=-7.998;QD=3.89;ReadPosRankSum=-2.629;VQSLOD=0.9309;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:92.45:0,92,2187	0/0:20,0:19:43.99:0,44,1077	0/0:56,0:5:12.04:0,12,248	0/0:65,0:15:10.63:0,11,604	1/1:31,1:32:0.76:2,1,0	0/0:9,0:8:5.12:0,5,92	0/1:24,0:23:3.28:3,0,410	0/0:30,0:26:42.10:0,42,946	0/0:10,0:10:4.79:0,5,65	0/1:59,2:58:99:544,0,1752	0/0:28,0:27:1.88:0,2,78	0/0:33,0:33:61.91:0,62,1597	0/0:52,0:52:99:0,126,2818	0/0:6,0:6:6.02:0,6,100	0/0:51,0:50:87.96:0,88,2057	0/0:40,0:40:71.07:0,71,1695	0/0:16,0:16:8.99:0,9,157	0/0:13,0:13:20.67:0,21,513	0/1:14,1:12:99:154,0,307	0/1:44,0:44:34.91:35,0,749	0/0:61,1:61:52.41:0,52,1372	0/0:51,0:50:60.68:0,61,1500	0/0:42,0:41:72.25:0,72,1786	0/0:60,0:61:99:0,117,2851	0/0:27,5:32:9.39:0,9,169	0/1:29,1:27:99:197,0,1200	0/1:9,0:8:22.68:23,0,291	0/0:15,0:15:3.93:0,4,551
chr10	53505659	.	TGA	T	551.19	PASS	AB=0.820;AC=7;AF=0.125;AN=56;BaseQRankSum=9.262;DP=939;FS=11.402;HRun=0;HaplotypeScore=287.4039;InbreedingCoeff=-0.0875;MQ=41.41;MQ0=27;MQRankSum=-7.784;QD=2.78;ReadPosRankSum=-0.931;VQSLOD=0.8705;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:92.14:0,92,1706	0/0:21,1:21:48.08:0,48,822	0/0:63,0:7:8.04:0,8,210	0/0:67,1:16:27.28:0,27,481	0/1:22,8:30:0.42:1,0,0	0/0:6,3:8:6.01:0,6,92	0/0:21,2:22:20.99:0,21,378	0/0:25,0:24:37.94:0,38,698	0/0:8,1:9:5.71:0,6,77	0/1:44,15:57:99:384,0,1271	0/0:17,12:28:2.19:0,2,57	0/0:31,0:31:63.60:0,64,1159	0/0:54,0:54:99:0,129,2239	0/0:5,0:5:6.02:0,6,110	0/0:51,0:50:83.96:0,84,1538	0/0:45,0:45:77.34:0,77,1331	0/0:12,0:12:5.53:0,6,111	0/0:11,0:11:18.06:0,18,337	0/1:12,3:12:69.17:69,0,142	0/1:35,9:44:44.27:44,0,555	0/0:56,0:55:24.01:0,24,766	0/0:49,0:47:53.09:0,53,920	0/0:41,0:39:71.57:0,72,1343	0/0:59,1:60:99:0,117,2112	0/0:25,7:32:10.01:0,10,157	0/1:24,4:27:82.85:83,0,832	0/1:6,3:8:56.35:56,0,213	0/1:11,2:13:36.44:36,0,317
chr10	53505667	.	AACATGT	A	2132.75	PASS	AB=0.759;AC=6;AF=0.107;AN=56;BaseQRankSum=10.262;DP=914;FS=20.954;HRun=0;HaplotypeScore=306.0150;InbreedingCoeff=-0.0651;MQ=44.93;MQ0=27;MQRankSum=-8.563;QD=14.22;ReadPosRankSum=1.575;VQSLOD=1.2875;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,100,3362	0/0:18,0:18:48.53:0,49,1422	0/0:76,0:12:9.36:0,9,774	0/0:77,0:21:31.93:0,32,810	0/0:18,7:31:0:0,0,3	0/0:4,3:8:5.24:0,5,41	0/0:18,2:19:16.62:0,17,321	0/0:25,0:24:34.02:0,34,698	0/0:5,1:9:3.01:0,3,55	0/1:28,17:51:99:1317,0,768	0/0:10,7:26:3.84:0,4,38	0/0:30,0:31:75.60:0,76,2298	0/0:54,0:54:99:0,154,4450	0/0:3,0:3:0.47:0,0,1	0/0:52,0:53:96.57:0,97,2885	0/0:45,0:46:91.25:0,91,2729	0/0:9,0:9:8.99:0,9,113	0/0:8,0:8:12.02:0,12,198	0/1:12,3:13:99:164,0,327	0/1:25,8:40:99:131,0,269	0/0:44,0:44:39.27:0,39,706	0/0:37,0:42:57.67:0,58,1857	0/0:36,0:37:69.71:0,70,2430	0/0:62,0:62:99:0,117,4230	0/0:22,7:32:2.25:0,2,37	0/1:19,4:22:99:301,0,539	0/1:5,3:8:99:119,0,119	0/1:7,3:11:95.59:222,0,96
chr10	53505670	.	ATGTG	A	2128.75	PASS	AB=0.924;AC=21;AF=0.375;AN=56;BaseQRankSum=8.420;DP=970;FS=19.791;HRun=0;HaplotypeScore=295.1137;InbreedingCoeff=0.1436;MQ=45.13;MQ0=27;MQRankSum=-6.699;QD=4.90;ReadPosRankSum=0.389;VQSLOD=0.8472;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:91.13:0,91,2170	0/0:21,0:18:45.09:0,45,976	0/0:77,0:13:16.43:0,16,602	0/1:77,1:20:18.28:18,0,580	0/0:27,8:35:0.85:0,1,43	1/1:8,2:9:2.84:53,3,0	0/1:23,0:22:14.12:83,0,14	0/1:22,2:23:6.19:279,0,6	0/0:10,1:11:2.30:0,2,48	0/1:51,5:54:99:561,0,189	0/1:29,3:30:39.62:44,0,40	0/0:33,0:33:74.92:0,75,1674	0/0:58,0:58:99:0,147,3453	0/1:3,2:5:0:0,0,0	0/0:53,0:52:72.73:0,73,1763	0/0:46,0:47:79.23:0,79,1703	1/1:10,0:10:0.40:1,0,0	0/1:9,0:9:28.89:127,0,29	0/1:13,0:11:45.10:45,0,218	0/1:41,7:48:33.06:226,0,33	1/1:43,2:45:11.87:150,12,0	0/0:48,0:46:57.92:0,58,1472	0/0:42,0:41:63.88:0,64,1591	0/0:64,0:65:99:0,113,2795	0/1:32,3:35:0.47:0,0,3	0/1:23,2:24:30.77:342,0,31	1/1:9,0:9:14.27:150,14,0	1/1:7,4:11:19.22:213,19,0
chr10	53505673	.	T	TGTGTGA	5886.99	PASS	AB=0.913;AC=29;AF=0.518;AN=56;BaseQRankSum=9.956;DP=1081;FS=15.391;HRun=0;HaplotypeScore=359.2769;InbreedingCoeff=0.4957;MQ=44.00;MQ0=26;MQRankSum=-8.596;QD=10.59;ReadPosRankSum=-1.834;VQSLOD=1.8397;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:91.09:0,91,1929	0/0:26,0:23:42.88:0,43,878	0/0:73,0:14:25.08:0,25,554	0/1:77,0:19:4.15:4,0,462	1/1:40,1:43:2.98:26,3,0	1/1:11,0:10:3.94:56,4,0	0/1:20,2:22:3.90:179,0,4	0/1:23,1:22:6.17:358,0,6	1/1:16,1:17:3.41:20,3,0	1/1:54,7:64:98.80:2563,99,0	1/1:33,1:34:6.01:74,6,0	0/0:43,0:43:73.82:0,74,1404	0/0:64,0:64:99:0,149,2951	1/1:16,0:16:0.69:1,1,0	0/0:57,0:56:72.48:0,72,1615	0/0:49,0:49:79.72:0,80,1526	0/1:13,0:13:5.26:14,0,5	0/1:8,1:9:48.70:195,0,49	0/1:13,0:12:99:247,0,181	1/1:51,4:55:35.18:372,35,0	1/1:38,8:47:12.43:150,12,0	0/0:52,0:50:58.64:0,59,1309	0/0:46,0:45:63.87:0,64,1402	0/0:67,0:66:99:0,113,2508	0/1:34,8:48:0.50:20,0,1	1/1:27,3:30:41.63:913,42,0	1/1:11,0:11:20.90:310,21,0	1/1:11,0:12:16.56:387,17,0
chr10	53505683	.	AGT	A	445.48	PASS	AB=0.817;AC=7;AF=0.125;AN=56;BaseQRankSum=9.771;DP=1150;FS=41.861;HRun=0;HaplotypeScore=362.4431;InbreedingCoeff=-0.0134;MQ=43.43;MQ0=29;MQRankSum=-7.323;QD=2.43;ReadPosRankSum=-5.848;VQSLOD=0.4024;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:47,3:50:87.26:0,87,1396	0/0:21,11:29:8.82:0,9,606	0/0:68,0:15:34.39:0,34,472	0/0:68,0:20:7.30:0,7,413	0/0:34,15:49:17.50:0,18,287	0/0:16,1:16:5.36:0,5,24	0/1:23,4:25:26.39:26,0,82	0/0:22,0:20:26.67:0,27,319	0/0:12,6:18:2.71:0,3,52	0/1:62,12:72:99:246,0,1287	0/0:35,9:42:3.03:0,3,53	0/0:38,6:44:37.46:0,37,1201	0/0:56,7:63:53.46:0,53,2336	1/1:14,5:19:3.29:28,3,0	0/0:52,5:56:66.40:0,66,1093	0/0:44,3:46:45.51:0,46,1035	0/1:8,4:12:55.83:65,0,56	0/0:12,0:12:19.47:0,19,178	0/0:21,0:16:36.02:0,36,401	0/0:52,6:58:3.95:0,4,379	0/0:52,0:52:2.69:0,3,36	0/0:48,16:62:62.35:0,62,991	0/0:39,8:46:63.20:0,63,1025	0/0:60,5:64:96.30:0,96,1598	0/0:44,11:54:9.50:0,9,111	0/1:30,5:32:99:124,0,532	0/1:10,6:16:80.50:81,0,102	0/0:12,1:13:1.08:0,1,100
chr10	53505701	.	TGTGA	T	648.52	PASS	AB=0.980;AC=10;AF=0.179;AN=56;BaseQRankSum=10.961;DP=1346;FS=14.818;HRun=0;HaplotypeScore=471.9232;InbreedingCoeff=-0.0543;MQ=44.75;MQ0=15;MQRankSum=-9.978;QD=2.24;ReadPosRankSum=-5.714;VQSLOD=-0.1858;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:58:78.21:0,78,1995	0/0:39,0:36:56.75:0,57,1396	0/0:43,0:20:53.14:0,53,928	0/0:50,0:24:41.33:0,41,824	0/0:56,1:56:18.04:0,18,503	1/1:20,0:20:4.45:24,4,0	0/1:25,1:24:69.82:70,0,186	0/0:28,0:25:46.62:0,47,1252	0/0:22,1:22:8.46:0,8,108	0/1:96,1:93:99:173,0,3051	0/0:52,0:50:2.53:0,3,84	0/0:57,0:57:77.58:0,78,2046	0/0:84,0:84:72.25:0,72,3651	0/1:28,0:28:10.35:10,0,37	0/0:60,0:59:74.83:0,75,1732	0/0:72,0:71:17.29:0,17,2066	0/1:17,0:17:99:116,0,127	0/1:9,1:10:24.94:25,0,262	0/0:29,0:24:13.21:0,13,994	0/0:70,0:70:34.92:0,35,900	0/0:62,2:64:11.33:0,11,123	0/0:89,0:87:63.08:0,63,1643	0/0:46,0:45:57.12:0,57,1370	0/0:71,0:70:96.27:0,96,2418	0/0:60,3:61:8.93:0,9,188	0/1:48,1:47:99:179,0,1241	0/1:26,0:26:57.60:58,0,367	0/1:17,0:17:99:135,0,208
chr10	53505706	.	GAGTA	G	1117.09	PASS	AB=0.969;AC=11;AF=0.196;AN=56;BaseQRankSum=12.831;DP=1328;FS=17.727;HRun=0;HaplotypeScore=460.7998;InbreedingCoeff=-0.1268;MQ=44.80;MQ0=14;MQRankSum=-11.001;QD=3.43;ReadPosRankSum=-3.752;VQSLOD=-0.1075;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:54:78.27:0,78,2148	0/1:40,0:37:3.68:4,0,1543	0/0:44,0:20:45.84:0,46,1008	0/0:47,0:24:33.02:0,33,879	0/0:55,2:56:18.53:0,19,522	1/1:19,0:19:1.28:2,1,0	0/1:26,0:24:31.23:31,0,251	0/0:29,0:24:63.22:0,63,1761	0/1:26,0:24:0.81:1,0,82	0/1:95,2:94:99:417,0,3415	0/0:50,1:49:3.03:0,3,89	0/0:60,0:60:36.93:0,37,1956	0/0:83,0:83:87.23:0,87,3969	0/0:28,0:28:4.69:0,5,90	0/0:66,0:65:75.20:0,75,1644	0/0:73,0:72:6.64:0,7,2259	0/1:12,3:15:99:133,0,137	0/1:11,0:11:62.20:62,0,265	0/0:29,0:25:16.54:0,17,1402	0/0:63,1:64:29.51:0,30,1005	0/0:56,4:60:14.01:0,14,239	0/0:88,0:86:67.17:0,67,1735	0/0:42,0:41:54.19:0,54,1467	0/0:68,1:68:93.22:0,93,2463	0/0:56,1:55:10.38:0,10,196	0/1:46,2:46:99:300,0,1629	0/1:27,0:27:99:125,0,424	0/1:16,1:17:99:172,0,234
chr10	53505735	.	AGT	A	3079.84	PASS	AB=0.794;AC=18;AF=0.321;AN=56;BaseQRankSum=2.525;DP=1517;FS=26.128;HRun=0;HaplotypeScore=467.6423;InbreedingCoeff=-0.1394;MQ=38.94;MQ0=14;MQRankSum=-3.371;QD=4.19;ReadPosRankSum=0.673;VQSLOD=0.8951;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:60,0:59:50.14:0,50,809	0/0:47,0:44:37.47:0,37,852	0/0:46,1:9:13.69:0,14,184	0/0:68,0:20:20.44:0,20,356	1/1:44,15:58:15.01:179,15,0	0/0:16,9:25:5.26:0,5,41	0/1:32,9:38:27.06:112,0,27	0/1:39,8:42:99:229,0,416	0/1:23,8:29:23.88:24,0,98	0/1:66,28:88:99:985,0,1011	0/1:53,15:65:0.07:0,0,0	0/0:66,0:66:52.71:0,53,946	0/0:94,0:95:93.17:0,93,1933	0/1:22,11:33:25.05:25,0,111	0/0:72,0:69:43.01:0,43,685	0/0:86,0:86:75.16:0,75,1244	0/1:11,6:18:99:122,0,128	0/1:9,4:14:99:137,0,209	0/1:23,5:23:99:157,0,340	0/1:52,21:74:26.93:249,0,27	1/1:33,26:63:4.15:76,4,0	0/0:102,0:100:53.74:0,54,912	0/0:50,0:49:33.10:0,33,526	0/0:61,0:61:51.15:0,51,830	0/1:39,14:52:22.30:71,0,22	0/1:43,23:64:99:661,0,639	0/1:21,7:28:99:100,0,371	0/1:13,4:16:99:117,0,132
chr10	53505736	.	G	GTA	458.26	PASS	AB=0.990;AC=12;AF=0.214;AN=56;BaseQRankSum=10.792;DP=1518;FS=26.792;HRun=0;HaplotypeScore=481.7185;InbreedingCoeff=-0.1217;MQ=38.86;MQ0=14;MQRankSum=-9.346;QD=0.98;ReadPosRankSum=-3.298;VQSLOD=0.0930;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:59,0:58:42.41:0,42,723	0/0:47,0:44:32.63:0,33,750	0/0:47,0:9:19.91:0,20,225	0/0:68,0:19:27.60:0,28,361	0/0:60,0:59:14.28:0,14,95	0/1:25,0:25:8.63:9,0,9	0/1:40,1:38:49.89:50,0,60	0/1:48,0:43:99:115,0,464	0/1:31,0:29:0.30:0,0,58	0/1:94,0:89:20.51:21,0,1343	1/1:68,0:65:0.43:3,0,0	0/0:64,2:66:26.02:0,26,793	0/0:92,3:95:23.70:0,24,1624	0/1:33,0:33:1.31:1,0,85	0/0:70,3:70:34.45:0,34,604	0/0:82,4:85:20.61:0,21,991	0/1:18,0:18:70.44:70,0,141	0/1:14,0:14:13.10:13,0,249	0/0:29,0:24:16.58:0,17,451	0/0:73,0:73:9.02:0,9,153	0/0:64,0:64:5.06:0,5,42	0/0:102,3:102:53.11:0,53,823	0/0:50,0:49:33.10:0,33,484	0/0:59,0:59:51.16:0,51,748	0/0:53,0:51:7.37:0,7,68	0/1:63,3:64:99:226,0,723	0/1:27,0:28:83.21:83,0,260	0/0:16,1:16:32.59:0,33,223
chr10	53505739	.	T	TGA	226.80	PASS	AB=0.990;AC=10;AF=0.179;AN=56;BaseQRankSum=9.823;DP=1517;FS=14.347;HRun=0;HaplotypeScore=472.4519;InbreedingCoeff=-0.0721;MQ=37.69;MQ0=17;MQRankSum=-8.190;QD=0.66;ReadPosRankSum=-2.336;VQSLOD=0.1921;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:59,0:58:52.18:0,52,757	0/0:44,0:41:54:0,54,818	0/0:47,0:9:26.57:0,27,245	0/0:68,0:17:18.96:0,19,337	0/0:58,0:57:14.76:0,15,94	0/1:25,0:25:7.83:9,0,8	0/1:40,1:38:11.52:12,0,69	0/1:49,0:44:30.56:31,0,516	0/0:31,0:29:3.31:0,3,69	0/0:94,0:88:53.63:0,54,1475	1/1:68,1:66:0.91:3,1,0	0/0:61,2:65:38.09:0,38,830	0/0:91,2:96:20.37:0,20,1606	0/1:33,0:33:0.37:0,0,85	0/0:71,2:71:34.52:0,35,605	0/0:81,4:84:21.40:0,21,1011	0/1:18,0:18:99:107,0,133	0/1:14,0:14:76.53:77,0,244	0/0:29,0:24:6.80:0,7,502	0/0:69,0:70:21.79:0,22,158	0/0:62,3:65:2.87:0,3,35	0/0:105,1:103:53.15:0,53,823	0/0:55,0:54:33.09:0,33,482	0/0:58,0:58:51.16:0,51,750	0/0:54,0:52:6.96:0,7,64	0/1:61,3:63:81.35:81,0,776	0/1:28,0:28:33.62:34,0,351	0/0:16,1:16:34.64:0,35,308
chr10	53505741	.	T	TGA	674.42	PASS	AB=0.985;AC=15;AF=0.268;AN=56;BaseQRankSum=10.054;DP=1523;FS=35.849;HRun=0;HaplotypeScore=473.5769;InbreedingCoeff=-0.2084;MQ=37.68;MQ0=17;MQRankSum=-9.304;QD=1.02;ReadPosRankSum=-2.613;VQSLOD=-0.2986;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:60,0:59:48.23:0,48,732	0/0:44,0:41:28.95:0,29,724	0/0:48,0:9:23.68:0,24,224	0/0:69,0:17:31.96:0,32,375	0/0:59,0:58:14.73:0,15,92	0/1:25,0:25:7.80:9,0,8	0/1:41,0:38:37.72:79,0,38	0/1:50,0:45:99:171,0,271	0/1:31,0:29:5.89:6,0,55	0/1:96,0:90:71.71:72,0,1173	1/1:69,0:66:0.92:4,1,0	0/0:65,0:65:40.57:0,41,816	0/1:96,0:96:6.03:6,0,1533	0/1:33,0:33:0.39:0,0,77	0/0:74,0:71:34.52:0,35,605	0/0:85,0:84:14.35:0,14,970	0/1:17,1:18:83.75:102,0,84	0/1:13,1:14:41.33:41,0,156	0/1:29,0:24:16.73:17,0,348	0/0:67,1:68:4.72:0,5,118	0/1:61,4:65:4.02:4,0,28	0/0:104,0:102:53.50:0,54,823	0/0:57,0:56:33.09:0,33,482	0/0:58,0:58:50.68:0,51,750	0/0:54,0:52:7.18:0,7,57	0/1:66,1:65:99:246,0,584	0/1:28,0:28:59.62:60,0,241	0/0:16,0:15:33.62:0,34,238
chr10	53505742	.	GTGTA	G	670.87	PASS	AB=0.958;AC=10;AF=0.179;AN=56;BaseQRankSum=7.227;DP=1515;FS=47.216;HRun=0;HaplotypeScore=481.5002;InbreedingCoeff=-0.1038;MQ=37.08;MQ0=19;MQRankSum=-6.276;QD=1.45;ReadPosRankSum=-5.598;VQSLOD=-0.7486;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:59,0:58:52.17:0,52,1194	0/0:41,2:40:41.01:0,41,1254	0/0:47,0:8:14.84:0,15,238	0/0:68,0:16:24.71:0,25,551	0/0:56,2:57:11.77:0,12,74	0/0:25,0:25:2.05:0,2,29	0/1:41,0:38:35.35:35,0,64	0/1:46,1:42:21.75:22,0,589	0/0:30,1:29:7.70:0,8,136	0/1:92,4:90:99:298,0,1782	1/1:67,2:66:0.77:14,1,0	0/0:59,6:65:67.76:0,68,1393	0/1:88,7:95:69.65:70,0,2562	0/0:33,0:33:13.91:0,14,132	0/0:67,6:70:42.27:0,42,1004	0/0:85,0:84:58.47:0,58,1764	0/1:17,1:18:92.60:93,0,273	0/1:12,2:14:99:120,0,409	0/0:29,0:24:22.05:0,22,553	0/0:66,2:68:14.63:0,15,235	0/0:51,11:65:10.38:0,10,44	0/0:101,4:103:54.58:0,55,1262	0/0:57,0:56:30.10:0,30,742	0/0:59,0:58:48.57:0,49,1166	0/0:50,3:51:8.88:0,9,72	0/1:65,2:65:99:125,0,1051	0/0:27,1:28:14.58:0,15,625	0/1:16,0:15:34.21:34,0,300
chr10	53505743	.	T	TGA	2651.98	PASS	AB=0.873;AC=19;AF=0.339;AN=56;BaseQRankSum=9.984;DP=1498;FS=17.538;HRun=0;HaplotypeScore=459.2975;InbreedingCoeff=-0.3524;MQ=37.14;MQ0=19;MQRankSum=-9.264;QD=3.00;ReadPosRankSum=-2.854;VQSLOD=-0.3742;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:54,4:58:48.67:0,49,732	0/0:36,5:40:16.60:0,17,695	0/0:45,0:6:14.71:0,15,174	0/0:68,0:16:31.50:0,32,366	0/0:38,13:54:11.82:0,12,75	0/1:19,6:25:6.33:47,0,6	0/1:38,3:38:45.05:64,0,45	0/1:41,9:44:99:416,0,251	0/1:24,6:29:20.41:20,0,63	0/1:73,18:86:99:701,0,959	1/1:53,7:61:2.27:7,2,0	0/1:57,4:65:46.60:47,0,759	0/1:84,8:95:99:118,0,1492	0/1:25,8:33:39.56:40,0,55	0/0:68,3:71:33.29:0,33,603	0/1:72,10:84:65.40:65,0,982	0/1:16,2:18:83.96:142,0,84	0/1:12,1:14:88.84:89,0,111	0/1:26,3:25:99:186,0,300	0/1:55,12:68:3.11:3,0,120	0/1:64,0:64:11.67:12,0,29	0/0:85,13:103:53.48:0,53,821	0/0:50,6:56:33.09:0,33,481	0/0:57,1:58:47.67:0,48,723	0/0:39,7:48:7.20:0,7,56	0/1:55,7:65:99:609,0,505	0/1:22,5:27:99:241,0,271	0/1:15,0:15:0.33:0,0,154
chr10	53505744	.	GTA	G	1769.75	PASS	AB=0.987;AC=19;AF=0.339;AN=56;BaseQRankSum=4.056;DP=1494;FS=22.645;HRun=0;HaplotypeScore=450.8001;InbreedingCoeff=-0.2202;MQ=37.03;MQ0=20;MQRankSum=-4.652;QD=2.24;ReadPosRankSum=-2.345;VQSLOD=-0.3156;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:59,0:58:49.43:0,49,854	0/1:42,0:40:4.52:5,0,823	0/0:44,0:6:12.51:0,13,191	0/0:68,0:16:15.53:0,16,402	1/1:54,0:53:11.55:64,12,0	0/0:25,0:25:5.35:0,5,28	0/1:40,0:37:31.13:61,0,31	0/1:48,2:43:99:203,0,364	0/1:31,0:29:0.04:0,0,86	0/1:91,1:86:99:611,0,1072	0/0:62,2:61:0.38:0,0,3	0/0:65,0:65:52.01:0,52,984	0/1:93,0:93:25.52:26,0,1877	0/1:33,0:33:8.43:8,0,96	0/0:73,0:71:40.26:0,40,710	0/0:84,0:83:47.82:0,48,1289	0/1:18,0:18:94.51:95,0,168	0/1:14,0:14:99:126,0,272	0/1:28,2:25:84.46:84,0,435	0/1:67,1:68:69.86:70,0,86	1/1:63,1:64:2.28:28,2,0	0/0:105,0:103:54.52:0,55,913	0/0:57,1:57:30.10:0,30,565	0/0:58,0:57:48.61:0,49,879	0/1:50,0:48:20.23:20,0,24	0/1:66,1:65:99:402,0,641	0/1:27,0:27:38.25:38,0,398	0/1:15,1:15:86.46:86,0,201
chr10	53505751	.	AGT	A	1612.78	PASS	AB=0.923;AC=17;AF=0.304;AN=56;BaseQRankSum=8.343;DP=1456;FS=18.579;HRun=0;HaplotypeScore=437.9727;InbreedingCoeff=-0.2876;MQ=35.43;MQ0=20;MQRankSum=-6.207;QD=2.15;ReadPosRankSum=-3.314;VQSLOD=0.2056;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:56,2:58:33.51:0,34,568	0/1:34,4:38:5.21:5,0,653	0/0:37,1:3:5.81:0,6,34	0/0:64,0:14:15.88:0,16,251	0/0:39,8:50:12.04:0,12,192	0/1:21,3:24:6.23:27,0,6	0/1:33,3:34:5.17:5,0,62	0/1:45,9:49:99:499,0,243	0/0:26,2:27:8.19:0,8,87	0/1:73,11:83:99:402,0,1062	1/1:49,5:56:2.89:20,3,0	0/1:51,6:63:11.08:11,0,779	0/1:80,8:90:99:149,0,1311	0/1:28,3:33:20.90:21,0,48	0/0:65,3:68:30.97:0,31,477	0/1:74,6:81:69.78:70,0,668	0/1:15,2:18:85.24:85,0,112	0/1:13,0:14:12.77:13,0,279	0/1:30,1:24:59.90:60,0,292	0/0:60,5:69:30.65:0,31,414	0/0:59,0:67:6.47:0,6,95	0/0:85,13:97:38.77:0,39,651	0/0:52,4:55:24.08:0,24,411	0/0:53,1:55:36.10:0,36,561	0/0:42,3:46:5.20:0,5,102	0/1:58,6:66:99:296,0,799	0/1:21,3:27:96.87:97,0,184	0/1:14,0:14:5.75:6,0,188
chr10	53505755	.	T	TATGA	1499.99	PASS	AB=0.955;AC=17;AF=0.304;AN=56;BaseQRankSum=7.203;DP=1415;FS=60.260;HRun=0;HaplotypeScore=448.9031;InbreedingCoeff=-0.1690;MQ=35.43;MQ0=19;MQRankSum=-5.450;QD=2.00;ReadPosRankSum=-0.566;VQSLOD=-0.7513;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:54,2:56:34.32:0,34,710	0/1:38,2:38:7.12:7,0,881	0/0:31,0:3:5.81:0,6,50	0/0:59,0:11:4.61:0,5,327	0/0:49,1:50:12.04:0,12,251	1/1:20,2:22:3.17:33,3,0	0/0:35,0:33:11.75:0,12,158	0/1:56,0:48:99:308,0,518	0/0:25,4:27:5.60:0,6,126	0/1:82,3:80:99:371,0,2000	1/1:55,2:54:5.84:38,6,0	0/1:62,1:63:4.71:5,0,987	0/1:85,2:87:72.80:73,0,1935	0/1:28,5:33:53.90:54,0,66	0/0:66,2:66:26.78:0,27,585	0/1:79,4:81:73.41:73,0,961	0/1:18,0:18:65.13:65,0,279	0/1:12,1:14:36.45:36,0,465	0/1:30,1:23:99:115,0,621	0/0:64,4:68:25.09:0,25,547	0/1:63,0:66:1.22:1,0,112	0/0:88,4:91:37.87:0,38,810	0/0:55,1:55:24.08:0,24,502	0/0:54,0:53:35.67:0,36,730	0/0:46,1:44:7.82:0,8,142	0/1:67,1:66:99:315,0,1508	0/1:25,2:27:99:160,0,436	0/0:15,0:14:31.27:0,31,454
chr10	53505765	.	T	TGA	1685.18	PASS	AB=0.945;AC=18;AF=0.333;AN=54;BaseQRankSum=5.563;DP=1266;FS=11.605;HRun=0;HaplotypeScore=418.1621;InbreedingCoeff=-0.2397;MQ=31.80;MQ0=17;MQRankSum=-8.474;QD=2.26;ReadPosRankSum=-0.200;VQSLOD=0.5700;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:53,2:54:22.90:0,23,428	0/1:36,2:38:56.91:57,0,532	./.	0/0:38,0:5:8.98:0,9,107	0/0:40,1:40:12.04:0,12,168	1/1:17,2:19:3.24:10,3,0	0/1:28,0:27:36.50:37,0,67	0/1:57,0:51:46.68:381,0,47	0/1:23,4:25:0.33:0,0,35	0/1:68,3:66:99:336,0,758	1/1:45,2:46:2.74:14,3,0	0/1:55,1:59:28.13:28,0,603	0/1:74,2:78:99:229,0,961	0/1:26,5:31:9.04:32,0,9	0/0:65,2:65:18.99:0,19,346	0/1:77,4:79:48.65:49,0,569	0/0:17,0:17:7.68:0,8,166	0/1:13,1:14:40.45:40,0,151	0/1:35,1:28:99:165,0,208	0/0:54,4:58:20.84:0,21,223	0/1:67,0:65:10.59:11,0,74	0/0:72,4:75:23.36:0,23,365	0/0:53,1:54:18.52:0,19,255	0/0:48,0:48:17.59:0,18,275	0/0:32,1:31:4.57:0,5,73	0/1:63,1:62:99:360,0,525	0/1:24,2:26:90.22:90,0,175	0/0:11,0:10:20.93:0,21,221
chr10	53505773	.	AGTGT	A	851.96	PASS	AB=0.951;AC=17;AF=0.327;AN=52;BaseQRankSum=3.160;DP=1139;FS=37.297;HRun=0;HaplotypeScore=377.7688;InbreedingCoeff=-0.2220;MQ=31.46;MQ0=16;MQRankSum=-3.773;QD=1.33;ReadPosRankSum=-4.823;VQSLOD=0.4832;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:50,2:51:11.99:0,12,276	0/0:33,0:33:0.04:0,0,516	./.	./.	1/1:29,7:35:2.99:23,3,0	1/1:17,0:17:4.14:22,4,0	0/1:24,0:24:15.27:18,0,15	0/1:51,2:47:99:146,0,428	0/0:20,0:18:10.18:0,10,70	0/1:61,0:58:99:221,0,501	0/0:41,0:39:2.42:0,2,11	0/1:49,1:50:46.23:46,0,294	0/1:73,2:75:42.46:42,0,1008	0/1:26,2:28:28.54:29,0,44	0/0:63,3:64:16.38:0,16,312	0/1:77,2:78:59.96:60,0,722	0/0:15,0:16:6.05:0,6,76	0/0:12,0:12:1.92:0,2,42	0/1:35,2:29:99:117,0,590	0/0:43,2:47:5.11:0,5,32	0/1:54,0:59:0.89:1,0,36	0/0:72,2:73:17.73:0,18,374	0/0:50,1:51:14.78:0,15,241	0/0:48,0:47:15:0,15,315	0/1:23,5:25:0.01:0,0,0	0/1:55,1:54:79.40:79,0,908	0/1:22,1:23:32.99:124,0,33	0/1:10,0:10:22.45:63,0,22
chr10	53505774	.	G	GTA	1026.80	PASS	AB=0.966;AC=21;AF=0.404;AN=52;BaseQRankSum=5.020;DP=1120;FS=27.705;HRun=0;HaplotypeScore=376.3071;InbreedingCoeff=-0.4553;MQ=31.40;MQ0=14;MQRankSum=-2.884;QD=1.32;ReadPosRankSum=-2.955;VQSLOD=0.8086;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:50:18.48:0,18,251	0/0:32,1:33:0.91:0,1,395	./.	./.	0/1:34,1:34:8.02:8,0,13	1/1:16,0:16:2.80:19,3,0	0/1:26,0:24:15.06:35,0,15	0/1:55,0:47:99:133,0,574	0/0:19,1:18:6.49:0,6,81	0/1:58,3:58:99:325,0,353	0/0:39,2:39:2.05:0,2,16	0/1:48,2:50:30.70:31,0,222	0/1:71,3:74:40.46:40,0,895	0/1:26,1:27:15.65:16,0,38	0/1:62,4:64:13.39:13,0,209	0/1:74,5:78:36.39:36,0,555	0/1:15,0:15:10.58:11,0,89	0/1:10,1:11:33.74:34,0,65	0/1:38,0:30:32.72:33,0,619	0/1:44,2:46:9.83:37,0,10	0/1:60,0:58:20.73:21,0,40	0/0:63,8:70:20.44:0,20,284	0/0:51,0:51:14.72:0,15,206	0/0:46,1:46:17.52:0,18,237	1/1:28,0:25:2.97:24,3,0	0/1:54,1:53:99:185,0,612	0/1:22,1:23:48.23:97,0,48	0/1:9,1:10:27.76:77,0,28
chr10	53505777	.	T	TGA	50.27	PASS	AB=0.968;AC=10;AF=0.192;AN=52;BaseQRankSum=3.344;DP=1058;FS=6.136;HRun=0;HaplotypeScore=350.3208;InbreedingCoeff=-0.1390;MQ=31.14;MQ0=11;MQRankSum=-1.500;QD=0.15;ReadPosRankSum=-0.126;VQSLOD=0.9858;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:49:16.60:0,17,232	0/0:29,1:30:38.03:0,38,450	./.	./.	0/0:32,1:32:2.94:0,3,18	0/0:12,0:12:2.24:0,2,15	0/0:25,0:23:3.81:0,4,21	0/1:50,0:43:11.37:11,0,711	0/0:20,0:18:10.16:0,10,86	0/1:50,3:50:61.92:62,0,641	0/0:39,2:39:2.12:0,2,26	0/0:47,1:48:14.12:0,14,285	0/0:69,2:71:37.20:0,37,957	0/0:22,1:23:8.56:0,9,77	0/1:61,2:61:8.75:9,0,189	0/0:74,3:76:47.70:0,48,634	0/1:11,0:11:28.02:28,0,30	0/1:9,1:10:22.06:22,0,68	0/0:36,0:28:38.55:0,39,681	0/1:44,2:46:0.71:1,0,15	0/1:56,0:54:14.65:15,0,23	0/0:66,5:70:20.12:0,20,254	0/0:51,0:51:14.71:0,15,207	0/0:46,1:46:14.57:0,15,220	1/1:24,0:21:0.47:1,0,0	0/0:52,0:51:63.07:0,63,849	0/1:22,1:23:22.51:23,0,124	0/0:9,1:10:27.96:0,28,185
chr10	53505792	.	G	GAGTA	1269.56	PASS	AB=0.990;AC=25;AF=0.521;AN=48;BaseQRankSum=3.761;DP=601;FS=38.804;HRun=0;HaplotypeScore=202.2712;InbreedingCoeff=-0.2585;MQ=31.01;MQ0=8;MQRankSum=-2.512;QD=3.02;ReadPosRankSum=-2.160;VQSLOD=1.3325;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:7.12:0,7,91	0/1:18,0:18:11.84:12,0,213	./.	./.	./.	1/1:3,0:3:1.25:3,1,0	0/0:8,0:6:2.63:0,3,18	0/1:29,2:25:99:431,0,271	0/1:8,0:8:12.75:14,0,13	0/1:23,1:22:99:166,0,238	1/1:22,0:20:2.97:20,3,0	0/1:36,0:36:41.15:41,0,69	0/1:53,0:53:99:151,0,420	1/1:10,0:10:3.90:56,4,0	0/0:51,0:49:7.03:0,7,131	0/1:51,0:50:75.51:76,0,285	0/1:7,0:7:13.78:34,0,14	0/1:4,0:4:15.20:15,0,28	0/1:20,0:17:99:279,0,201	1/1:22,1:23:2.77:6,3,0	1/1:23,0:22:4.88:18,5,0	0/1:41,0:40:22.63:23,0,25	0/0:39,0:39:5.31:0,5,70	0/0:35,0:34:9.03:0,9,172	1/1:11,0:9:0.94:1,1,0	0/1:27,1:27:36.32:36,0,455	0/1:6,0:6:0.02:23,0,0	./.
chr10	53506923	.	TG	T	1142.58	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.255;DP=480;FS=13.353;HRun=2;HaplotypeScore=45.3166;InbreedingCoeff=0.9831;MQ=77.78;MQ0=0;MQRankSum=-0.468;QD=34.62;ReadPosRankSum=-3.361;VQSLOD=1.1716;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:60.15:0,60,834	0/0:6,0:6:18.06:0,18,270	0/0:12,0:12:31.34:0,31,436	0/0:9,0:9:21.07:0,21,306	0/0:23,0:23:66.22:0,66,984	0/0:24,0:24:69.22:0,69,1010	0/0:16,0:16:45.15:0,45,673	1/1:0,33:33:99:1237,99,0	0/0:10,0:10:30.06:0,30,424	0/0:23,0:23:69.23:0,69,1034	0/0:17,0:17:51.15:0,51,725	0/0:9,0:9:27.09:0,27,405	0/0:15,0:15:45.15:0,45,674	0/0:16,0:16:48.16:0,48,710	0/0:10,0:10:30.09:0,30,430	0/0:8,0:8:24.04:0,24,335	0/0:30,0:30:90.30:0,90,1348	0/0:14,0:14:39.11:0,39,563	0/0:18,0:18:54.15:0,54,751	0/0:23,0:23:69.23:0,69,1033	0/0:18,0:18:48.11:0,48,670	0/0:10,0:10:30.10:0,30,450	0/0:19,0:19:57.19:0,57,840	0/0:28,0:28:84.28:0,84,1246	0/0:18,0:18:54.18:0,54,804	0/0:23,0:23:69.18:0,69,991	0/0:14,0:14:42.14:0,42,629	0/0:13,0:13:39.13:0,39,584
chr10	53507042	.	AC	A	13414.80	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=11.124;DP=536;FS=6.095;HRun=2;HaplotypeScore=54.2157;InbreedingCoeff=0.9990;MQ=71.78;MQ0=0;MQRankSum=-3.602;QD=35.49;ReadPosRankSum=1.336;VQSLOD=5.2380;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:90.24:0,90,1266	0/0:9,0:9:27.09:0,27,404	0/0:9,0:9:20.74:0,21,279	0/0:13,0:13:39.13:0,39,580	1/1:0,18:18:48.16:623,48,0	1/1:0,26:26:72.23:935,72,0	1/1:0,25:25:57.19:740,57,0	1/1:1,38:39:99:1466,114,0	1/1:0,16:16:42.14:545,42,0	1/1:1,22:23:66.15:819,66,0	1/1:0,25:25:72.23:933,72,0	0/0:15,0:15:45.14:0,45,655	0/0:23,0:22:60.20:0,60,896	1/1:0,13:13:36.12:467,36,0	0/0:11,0:11:33.11:0,33,495	0/0:10,0:10:30.10:0,30,449	1/1:0,35:35:99:1324,102,0	1/1:1,17:18:51.17:662,51,0	1/1:0,18:18:54.15:685,54,0	1/1:0,20:20:54.18:699,54,0	1/1:1,16:17:42.14:545,42,0	0/0:13,0:13:39.13:0,39,584	0/0:10,0:10:30.10:0,30,448	0/0:15,0:15:45.15:0,45,673	1/1:1,16:17:45.15:584,45,0	1/1:0,25:25:75.22:945,75,0	1/1:0,26:26:63.20:818,63,0	1/1:0,17:17:48.16:623,48,0
chr10	53507333	.	GT	G	551.15	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.232;DP=602;FS=12.207;HRun=5;HaplotypeScore=56.9214;InbreedingCoeff=0.9975;MQ=88.78;MQ0=0;MQRankSum=-0.588;QD=23.96;ReadPosRankSum=-3.070;VQSLOD=1.3546;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,114,1540	0/0:9,0:9:24.08:0,24,328	0/0:27,0:28:71.83:0,72,881	0/0:19,0:19:45.13:0,45,595	0/0:31,0:31:81.26:0,81,1092	0/0:18,0:18:51.16:0,51,683	0/0:17,0:17:45.13:0,45,587	1/1:4,19:23:57.16:646,57,0	0/0:23,0:23:66.21:0,66,887	0/0:33,0:33:96.09:0,96,1257	0/0:22,0:22:60.18:0,60,790	0/0:13,0:13:39.11:0,39,502	0/0:16,0:16:48.16:0,48,653	0/0:21,0:21:63.19:0,63,830	0/0:25,0:25:72.22:0,72,954	0/0:18,0:18:54.15:0,54,692	0/0:29,0:29:81.27:0,81,1108	0/0:18,0:18:48.16:0,48,653	0/0:14,0:14:42.13:0,42,559	0/0:25,0:25:75.25:0,75,1025	0/0:24,0:24:72.21:0,72,947	0/0:31,0:31:90.29:0,90,1214	0/0:19,0:19:54.18:0,54,738	0/0:15,0:15:45.15:0,45,615	0/0:14,0:14:42.14:0,42,574	0/0:21,0:21:51.16:0,51,684	0/0:25,0:25:69.20:0,69,907	0/0:11,0:11:33.11:0,33,451
chr10	53508869	.	TGAGA	T	1297.06	PASS	AB=0.852;AC=33;AF=0.717;AN=46;BaseQRankSum=3.589;DP=489;FS=16.859;HRun=0;HaplotypeScore=91.8565;InbreedingCoeff=0.3028;MQ=63.50;MQ0=8;MQRankSum=-2.776;QD=4.20;ReadPosRankSum=-1.293;VQSLOD=0.3514;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:21,2:21:3.01:46,3,0	1/1:2,1:4:6.01:74,6,0	./.	./.	0/0:24,0:27:5.74:0,6,37	0/1:13,1:17:28.68:29,0,110	0/0:11,0:10:8.76:0,9,123	./.	0/0:20,0:21:23.78:0,24,305	1/1:25,8:33:15:185,15,0	./.	1/1:18,1:21:6.01:74,6,0	0/1:19,2:21:6.11:40,0,6	1/1:12,5:18:14.76:193,15,0	0/0:11,0:11:11.83:0,12,221	1/1:9,0:11:3:28,3,0	1/1:7,0:9:6:54,6,0	0/1:10,0:11:0:0,0,0	1/1:13,0:13:3.01:46,3,0	1/1:16,1:19:3:28,3,0	1/1:13,0:14:3:28,3,0	1/1:3,1:6:9.01:99,9,0	1/1:17,2:18:6.02:92,6,0	1/1:16,1:18:9.02:120,9,0	0/1:9,3:13:3.44:73,0,3	0/1:20,1:24:22.56:83,0,23	1/1:10,1:14:12.02:148,12,0	./.
chr10	53517160	.	TAAA	T	1136.70	PASS	AB=0.972;AC=25;AF=0.500;AN=50;BaseQRankSum=8.511;DP=253;FS=7.205;HRun=13;HaplotypeScore=67.9920;InbreedingCoeff=0.7570;MQ=64.83;MQ0=18;MQRankSum=-5.964;QD=8.81;ReadPosRankSum=1.636;VQSLOD=-0.4183;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:16:21.07:0,21,401	0/0:6,0:8:21.03:0,21,334	0/0:40,0:14:2.68:0,3,11	0/1:34,0:13:10.14:10,0,52	1/1:7,5:9:14.75:123,15,0	1/1:7,2:8:17.37:113,17,0	./.	./.	1/1:2,0:2:5.86:35,6,0	1/1:9,0:9:23.47:159,23,0	1/1:8,1:7:17.67:140,18,0	0/0:9,0:8:18.02:0,18,308	0/0:4,0:4:12.04:0,12,231	1/1:2,1:3:8.88:72,9,0	0/0:5,0:5:12:0,12,193	0/0:4,0:5:15.02:0,15,223	0/0:3,0:2:3.01:0,3,37	0/0:1,0:1:0.47:0,0,1	1/1:1,1:2:5.93:54,6,0	1/1:11,1:10:16.51:129,17,0	./.	0/0:4,0:4:9.03:0,9,171	0/0:15,0:16:35.92:0,36,661	0/0:5,0:5:15.04:0,15,258	1/1:3,3:6:11.72:85,12,0	1/1:10,6:14:15.48:237,15,0	1/1:6,0:5:11.76:86,12,0	1/1:8,0:5:14.50:82,14,0
chr10	53517163	.	A	AAAAAAAATG	5940.33	PASS	AB=1.000;AC=29;AF=0.580;AN=50;BaseQRankSum=8.122;DP=257;FS=13.789;HRun=0;HaplotypeScore=78.7999;InbreedingCoeff=0.7702;MQ=62.50;MQ0=13;MQRankSum=-7.396;QD=42.13;ReadPosRankSum=1.876;VQSLOD=3.5987;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:17:27.04:0,27,559	0/0:9,0:9:21.07:0,21,501	0/0:37,0:10:2.88:0,3,15	0/1:32,0:11:25.85:26,0,51	1/1:9,6:12:21.03:620,21,0	1/1:5,6:10:21.03:843,21,0	./.	./.	1/1:1,1:2:6.02:257,6,0	1/1:9,0:9:24.07:596,24,0	1/1:9,0:7:21.07:392,21,0	0/0:9,0:8:18.95:0,19,411	0/0:4,0:4:12.04:0,12,295	1/1:2,1:3:9.03:333,9,0	0/0:5,0:5:12:0,12,269	0/0:5,0:5:15.05:0,15,373	1/1:3,0:2:6.02:74,6,0	1/1:1,0:1:3.01:37,3,0	1/1:2,0:2:6.02:111,6,0	1/1:12,0:10:24.06:558,24,0	./.	0/0:4,0:4:9.03:0,9,228	0/0:16,0:16:36.12:0,36,911	0/0:5,0:5:15.05:0,15,374	1/1:8,3:11:21.03:569,21,0	1/1:17,0:15:39.13:859,39,0	1/1:6,0:5:12.02:296,12,0	1/1:8,0:5:15.05:370,15,0
chr10	53517165	.	A	AAAAAATG	6818.86	PASS	AB=1.000;AC=27;AF=0.519;AN=52;BaseQRankSum=7.912;DP=268;FS=21.433;HRun=0;HaplotypeScore=69.5915;InbreedingCoeff=0.6109;MQ=59.94;MQ0=11;MQRankSum=-7.144;QD=45.16;ReadPosRankSum=2.604;VQSLOD=2.9916;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:17:27.09:0,27,521	0/0:9,0:9:24.08:0,24,492	0/0:33,0:8:3.01:0,3,32	0/1:27,0:10:3.53:4,0,54	0/1:15,0:12:15.86:348,0,16	1/1:11,0:10:3.51:514,4,0	./.	./.	1/1:2,0:2:6.02:195,6,0	1/1:4,8:11:27.06:968,27,0	1/1:6,4:9:24.06:628,24,0	0/0:9,0:8:18.06:0,18,388	0/0:4,0:4:12.04:0,12,268	1/1:3,0:3:9:213,9,0	0/0:4,0:4:12:0,12,232	0/0:5,0:5:15.05:0,15,334	1/1:3,0:3:6:140,6,0	1/1:0,0:1:3.01:70,3,0	1/1:2,1:3:6:145,6,0	1/1:8,7:14:33.09:962,33,0	0/0:1,0:1:0:0,0,0	0/0:4,0:4:9.03:0,9,203	0/0:16,0:16:36.12:0,36,844	0/0:6,0:6:18.05:0,18,352	0/1:12,0:12:29.05:306,0,29	1/1:9,8:16:42.14:1309,42,0	1/1:2,5:6:15.03:481,15,0	1/1:1,7:5:15.05:537,15,0
chr10	53517170	.	A	ATG	1474.61	PASS	AB=0.951;AC=16;AF=0.308;AN=52;BaseQRankSum=9.947;DP=251;FS=6.085;HRun=0;HaplotypeScore=62.4736;InbreedingCoeff=-0.1071;MQ=55.44;MQ0=9;MQRankSum=-5.781;QD=9.22;ReadPosRankSum=5.731;VQSLOD=2.1097;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:16:27.09:0,27,421	0/0:8,0:8:24.06:0,24,343	1/1:26,0:5:2.69:8,3,0	0/1:17,0:4:12.85:13,0,32	0/1:15,0:12:93.05:93,0,114	0/1:10,0:9:72.34:160,0,72	./.	./.	0/1:2,1:3:15.79:68,0,16	0/1:11,0:10:52.43:233,0,52	0/1:9,1:8:58.66:98,0,59	0/0:8,0:7:18.06:0,18,284	0/0:5,0:5:12.04:0,12,196	0/1:2,1:3:1.43:68,0,1	0/0:5,0:5:15.01:0,15,211	0/0:5,0:5:15.04:0,15,223	0/0:6,0:4:8.92:0,9,100	0/0:1,0:1:2.98:0,3,21	0/1:4,0:3:29.64:41,0,30	0/1:15,0:13:99:199,0,120	0/0:1,0:1:3.01:0,3,42	0/0:4,0:4:9.03:0,9,147	0/0:16,0:16:35.93:0,36,587	0/0:6,0:6:18.06:0,18,288	0/1:13,0:13:99:116,0,241	0/1:18,0:16:6.35:255,0,6	0/1:7,0:6:63.40:106,0,63	1/1:7,1:5:15.04:169,15,0
chr10	53517175	.	GAA	G	2451.68	PASS	AB=0.613;AC=25;AF=0.481;AN=52;BaseQRankSum=6.290;DP=256;FS=26.162;HRun=11;HaplotypeScore=60.9224;InbreedingCoeff=0.6248;MQ=56.08;MQ0=8;MQRankSum=-7.366;QD=19.46;ReadPosRankSum=1.439;VQSLOD=0.7141;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:24.07:0,24,343	0/0:8,0:8:21.03:0,21,297	0/0:22,0:4:3.84:0,4,22	0/0:18,0:4:2.99:0,3,25	0/1:6,10:13:49.11:192,0,49	0/1:2,8:9:12.34:192,0,12	./.	./.	1/1:2,2:4:12.01:118,12,0	1/1:1,10:10:29.99:302,30,0	1/1:3,7:8:21.83:194,22,0	0/0:8,0:8:23.56:0,24,260	0/0:5,0:5:9.03:0,9,139	0/1:2,2:4:12.49:81,0,12	0/0:5,0:5:15.05:0,15,231	0/0:5,0:5:15.05:0,15,231	0/0:0,0:5:9.86:0,10,34	1/1:1,0:1:0.47:1,0,0	1/1:1,3:3:6.01:63,6,0	1/1:2,15:15:39.02:392,39,0	1/1:0,1:1:3.01:32,3,0	0/0:5,0:5:12:0,12,158	0/0:16,0:17:38:0,38,447	0/0:6,0:6:18.06:0,18,275	1/1:3,11:14:33.08:348,33,0	1/1:7,12:17:41.43:399,41,0	1/1:1,6:6:17.94:175,18,0	1/1:0,8:5:15.03:153,15,0
chr10	53517183	.	A	ATG	211.21	PASS	AB=0.923;AC=6;AF=0.115;AN=52;BaseQRankSum=2.967;DP=272;FS=4.389;HRun=0;HaplotypeScore=69.7268;InbreedingCoeff=0.1165;MQ=53.77;MQ0=13;MQRankSum=-3.373;QD=2.89;ReadPosRankSum=-0.730;VQSLOD=1.2678;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:24.08:0,24,390	0/0:8,0:8:24.07:0,24,358	1/1:19,0:3:5.31:31,5,0	0/0:17,0:3:7.83:0,8,74	0/0:18,0:15:32.69:0,33,329	0/0:11,0:10:23.08:0,23,204	0/0:7,0:3:5.67:0,6,35	./.	0/0:4,0:4:11.89:0,12,84	0/0:12,0:11:18.95:0,19,115	0/1:10,2:9:49.08:140,0,49	0/0:8,0:8:24.07:0,24,355	0/0:5,0:5:12.04:0,12,192	0/0:5,0:5:14.83:0,15,125	0/0:6,0:6:18.06:0,18,284	0/0:6,0:6:18.06:0,18,290	0/0:8,0:6:14.96:0,15,124	./.	0/0:8,0:6:16.26:0,16,177	0/1:17,1:15:31.38:31,0,138	0/0:2,0:2:6:0,6,66	0/0:6,0:6:15.04:0,15,212	0/0:16,0:16:38.93:0,39,575	0/0:6,0:6:18.06:0,18,293	0/0:14,0:14:35.75:0,36,267	0/1:14,2:15:81.68:111,0,82	0/1:8,0:7:17.14:17,0,42	0/0:9,0:6:10.35:0,10,43
chr10	53517325	.	G	GA	695.56	PASS	AB=0.889;AC=5;AF=0.089;AN=56;BaseQRankSum=-5.423;DP=423;FS=4.061;HRun=10;HaplotypeScore=41.2309;InbreedingCoeff=0.7039;MQ=61.72;MQ0=0;MQRankSum=-0.099;QD=14.49;ReadPosRankSum=3.070;VQSLOD=3.4984;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:62.85:0,63,517	0/0:11,0:11:26.96:0,27,222	0/0:9,0:10:19.05:0,19,135	0/0:7,0:6:11.93:0,12,91	0/0:11,0:11:23.96:0,24,197	0/0:13,0:13:26.96:0,27,222	0/0:15,0:12:26.96:0,27,222	0/0:22,0:18:10.22:0,10,243	0/0:16,0:16:16.26:0,16,251	0/0:22,0:22:41.90:0,42,345	0/0:7,0:7:14.97:0,15,123	0/0:17,0:17:41.93:0,42,344	0/0:9,0:9:23.95:0,24,193	0/0:20,0:20:56.92:0,57,468	0/0:15,0:16:37.99:0,38,301	0/0:15,0:15:35.92:0,36,292	1/1:1,14:13:30.08:320,30,0	1/1:2,15:17:45.11:480,45,0	0/0:21,0:20:18.52:0,19,316	0/0:16,0:16:38.92:0,39,317	0/1:14,2:16:24.99:25,0,232	0/0:12,0:12:32.96:0,33,271	0/0:17,0:17:29.94:0,30,246	0/0:8,0:8:17.97:0,18,148	0/0:18,0:18:35.91:0,36,292	0/0:20,0:20:50.94:0,51,419	0/0:19,0:19:49.94:0,50,397	0/0:2,0:2:5.99:0,6,49
chr10	53518744	.	CAGAG	C	1944.25	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.749;DP=628;FS=17.925;HRun=0;HaplotypeScore=104.2086;InbreedingCoeff=0.9913;MQ=66.60;MQ0=0;MQRankSum=-5.660;QD=40.51;ReadPosRankSum=-0.123;VQSLOD=2.8404;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,1:27:13.37:0,13,1689	0/0:15,0:15:45.10:0,45,1136	0/0:25,0:25:60.19:0,60,1500	0/0:17,0:17:45.15:0,45,1098	0/0:38,0:38:99:0,108,2789	0/0:35,0:35:96.33:0,96,2556	0/0:13,0:13:39.13:0,39,1039	1/1:5,16:19:42.13:744,42,0	0/0:24,0:24:60.21:0,60,1597	0/0:28,0:28:84.29:0,84,2183	0/0:20,0:20:51.18:0,51,1358	0/0:15,0:15:39.12:0,39,984	0/0:21,0:21:54.19:0,54,1438	0/0:20,0:20:51.18:0,51,1356	0/0:28,0:28:81.28:0,81,2150	0/0:21,0:20:60.21:0,60,1554	1/1:1,16:17:45.15:839,45,0	1/1:1,9:9:27.09:504,27,0	0/0:24,0:24:69.24:0,69,1778	0/0:37,0:37:99:0,108,2735	0/0:20,0:20:45.15:0,45,1170	0/0:19,0:19:48.15:0,48,1218	0/0:23,0:23:54.19:0,54,1386	0/0:23,0:23:66.23:0,66,1759	0/0:19,0:19:57.17:0,57,1461	0/0:24,0:24:72.25:0,72,1908	0/0:31,0:31:69.24:0,69,1763	0/0:12,0:12:36.12:0,36,885
chr10	53518890	.	T	TAA	3914.67	PASS	AB=1.000;AC=28;AF=0.737;AN=38;BaseQRankSum=0.472;DP=405;FS=0.000;HRun=10;HaplotypeScore=49.8469;InbreedingCoeff=0.6995;MQ=30.32;MQ0=185;MQRankSum=-2.735;QD=15.00;ReadPosRankSum=-1.515;VQSLOD=0.8085;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:7:2.50:9,2,0	0/0:5,0:3:9.02:0,9,92	0/0:10,0:1:3:0,3,29	./.	1/1:3,18:14:24.08:343,24,0	1/1:3,15:14:17.55:232,18,0	1/1:3,10:6:9.03:134,9,0	./.	1/1:2,12:11:18.02:243,18,0	1/1:1,15:11:33.11:475,33,0	1/1:2,14:13:20.89:283,21,0	./.	0/1:12,0:5:0:0,0,0	1/1:3,14:13:18.02:243,18,0	./.	0/0:10,0:7:8.92:0,9,91	./.	./.	1/1:6,7:9:15.05:218,15,0	1/1:3,20:16:42.14:619,42,0	./.	0/0:21,0:11:2.61:0,3,30	0/1:25,0:19:0:0,0,0	./.	1/1:2,7:9:12.04:178,12,0	1/1:2,13:12:30.10:446,30,0	1/1:2,17:15:36.07:490,36,0	./.
chr10	53519395	.	G	GA	2366.76	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-1.815;DP=609;FS=0.516;HRun=1;HaplotypeScore=62.1600;InbreedingCoeff=0.9589;MQ=87.05;MQ0=0;MQRankSum=-0.869;QD=39.45;ReadPosRankSum=-0.691;VQSLOD=3.8494;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,117,1486	0/0:7,0:7:21.07:0,21,273	0/0:29,0:29:81.16:0,81,969	0/0:18,0:18:25.29:0,25,467	0/0:24,0:24:60.19:0,60,776	0/0:24,0:24:69.22:0,69,895	0/0:21,0:21:63.17:0,63,786	1/1:0,31:31:93.31:1389,93,0	0/0:26,0:26:63.20:0,63,818	0/0:19,0:19:54.18:0,54,701	0/0:23,0:23:63.20:0,63,817	0/0:20,0:20:60.20:0,60,779	0/0:25,0:25:66.21:0,66,855	0/0:15,0:15:36.12:0,36,467	0/0:23,0:23:69.22:0,69,894	0/0:21,0:21:54.18:0,54,700	1/1:0,23:23:57.19:849,57,0	1/1:0,6:6:18.06:270,18,0	0/0:15,0:15:45.15:0,45,584	0/0:23,0:23:66.21:0,66,856	0/0:24,0:24:72.18:0,72,888	0/0:18,0:18:48.14:0,48,608	0/0:18,0:18:54.18:0,54,699	0/0:30,0:30:90.28:0,90,1154	0/0:17,0:17:51.16:0,51,658	0/0:41,0:41:99:0,120,1529	0/0:24,0:24:69.21:0,69,879	0/0:2,0:2:6.02:0,6,77
chr10	53520399	.	C	CACA	5129.01	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.307;DP=718;FS=2.675;HRun=0;HaplotypeScore=104.1985;InbreedingCoeff=0.9997;MQ=96.15;MQ0=0;MQRankSum=-5.551;QD=61.06;ReadPosRankSum=-0.827;VQSLOD=6.4165;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,166,2961	0/0:11,0:11:33.11:0,33,614	0/0:34,0:34:99:0,99,1783	0/0:36,0:36:97.52:0,98,1609	0/0:22,0:22:66.19:0,66,1136	0/0:33,0:33:96.32:0,96,1757	0/0:34,0:34:99:0,102,1839	1/1:5,20:29:84.17:1743,84,0	0/0:26,0:26:78.27:0,78,1435	0/0:23,0:23:63.21:0,63,1130	0/0:21,0:21:57.17:0,57,992	0/0:24,0:24:72.24:0,72,1305	0/0:22,0:22:66.21:0,66,1171	0/0:16,0:16:48.13:0,48,802	0/0:27,0:27:81.25:0,81,1419	0/0:26,0:26:78.24:0,78,1365	1/1:3,31:34:87.30:2131,87,0	1/1:0,20:21:51.14:1255,51,0	0/0:16,0:16:45.15:0,45,810	0/0:15,0:15:45.15:0,45,822	0/0:37,0:37:99:0,108,1892	0/0:34,0:34:99:0,102,1838	0/0:20,0:20:60.18:0,60,1055	0/0:28,0:28:84.27:0,84,1532	0/0:21,0:21:63.16:0,63,1109	0/0:19,0:19:54.19:0,54,1002	0/0:24,0:24:72.25:0,72,1323	0/0:10,0:10:30.10:0,30,552
chr10	53527572	.	CT	C	2396.10	PASS	AB=0.774;AC=17;AF=0.304;AN=56;BaseQRankSum=10.630;DP=617;FS=5.770;HRun=12;HaplotypeScore=83.9638;InbreedingCoeff=0.7125;MQ=70.19;MQ0=0;MQRankSum=-1.148;QD=12.95;ReadPosRankSum=2.565;VQSLOD=3.9351;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,1:25:24.84:0,25,424	0/0:7,0:7:12.02:0,12,122	0/1:13,1:15:5.32:5,0,151	0/0:8,0:8:4.40:0,4,60	1/1:5,23:29:70.26:539,70,0	1/1:2,20:22:59.76:464,60,0	1/1:2,16:18:46.86:354,47,0	0/0:24,1:28:26.53:0,27,426	1/1:5,11:16:23.88:186,24,0	0/0:29,1:30:39.87:0,40,576	0/0:18,1:19:25.31:0,25,424	0/0:23,0:23:66.09:0,66,647	0/0:27,1:28:42.87:0,43,587	1/1:3,14:17:35.86:278,36,0	0/0:20,0:23:50.75:0,51,475	0/0:19,1:22:30.70:0,31,473	1/1:5,20:25:37.20:398,37,0	0/1:6,10:16:30.64:156,0,31	0/0:15,0:15:33.07:0,33,335	0/0:25,1:29:48.51:0,49,622	0/0:32,3:35:20.25:0,20,703	0/0:28,0:29:51.79:0,52,650	0/0:35,0:37:61.25:0,61,657	0/1:11,3:14:7.39:7,0,296	1/1:1,12:13:2.44:202,2,0	0/0:33,0:33:49.03:0,49,669	0/0:31,1:31:54.89:0,55,720	0/0:9,0:9:15.02:0,15,146
chr10	53528568	.	A	AAAC	5223.74	PASS	AB=0.590;AC=25;AF=0.446;AN=56;BaseQRankSum=-4.545;DP=536;FS=4.856;HRun=0;HaplotypeScore=85.2499;InbreedingCoeff=0.7032;MQ=65.10;MQ0=13;MQRankSum=2.498;QD=18.93;ReadPosRankSum=3.935;VQSLOD=4.3345;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:36:97.94:0,98,897	0/0:10,0:10:23.85:0,24,186	0/0:33,0:16:6.58:0,7,193	0/0:20,0:9:5.15:0,5,59	1/1:1,25:28:67.89:750,68,0	1/1:1,10:11:9.31:459,9,0	1/1:3,13:17:23.90:380,24,0	0/0:26,0:26:60.80:0,61,575	0/1:4,11:15:3.92:313,0,4	1/1:7,2:22:7.07:470,7,0	1/1:8,0:29:8.10:486,8,0	0/0:15,0:15:29.51:0,30,243	0/0:9,0:9:23.29:0,23,202	1/1:2,10:13:5.13:148,5,0	0/0:17,0:17:43.35:0,43,368	0/0:9,0:9:18.03:0,18,210	0/0:26,0:25:29.69:0,30,252	0/0:20,0:20:31.80:0,32,270	0/1:8,2:23:40.03:368,0,40	1/1:5,2:23:21.94:534,22,0	1/1:2,0:9:11.83:129,12,0	0/0:10,0:9:26.15:0,26,190	0/0:10,0:10:17.95:0,18,168	0/0:17,0:17:20.76:0,21,207	1/1:1,10:15:20.78:274,21,0	1/1:8,1:30:24.50:619,25,0	0/1:9,1:29:51.96:230,0,52	1/1:3,0:7:6:63,6,0
chr10	53529443	.	T	TTAAA	3117.75	PASS	AC=20;AF=0.370;AN=54;BaseQRankSum=0.112;DP=346;FS=2.313;HRun=0;HaplotypeScore=60.4847;InbreedingCoeff=0.7542;MQ=58.30;MQ0=4;MQRankSum=-1.298;QD=21.35;ReadPosRankSum=1.054;VQSLOD=3.3476;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:23:15.38:0,15,441	0/0:5,0:5:3.01:0,3,48	0/0:9,0:6:3.01:0,3,41	0/0:7,0:3:3.01:0,3,35	0/0:12,0:12:12:0,12,192	0/0:23,0:23:24.07:0,24,360	0/0:10,0:10:9.03:0,9,144	0/0:34,0:34:27.08:0,27,408	0/0:3,0:3:6.02:0,6,96	1/1:11,8:19:27.09:644,27,0	1/1:10,8:18:27.05:580,27,0	0/0:7,0:7:9.02:0,9,121	0/0:11,0:11:21.07:0,21,335	0/0:3,0:3:3:0,3,25	0/0:8,0:8:12.04:0,12,192	0/0:9,0:9:15.05:0,15,239	1/1:13,0:13:6.49:116,6,0	1/1:12,0:15:18.01:258,18,0	1/1:9,5:13:18.06:412,18,0	1/1:14,4:18:12.04:288,12,0	1/1:11,0:11:3.01:67,3,0	0/0:8,0:8:6.02:0,6,96	./.	0/0:2,0:2:3.01:0,3,48	0/0:13,0:13:21.07:0,21,335	1/1:9,0:13:15.05:244,15,0	1/1:5,7:12:21.07:504,21,0	1/1:6,0:13:12.04:199,12,0
chr10	53529679	.	A	AAAAACT	16758.69	PASS	AB=0.962;AC=33;AF=0.589;AN=56;BaseQRankSum=-8.814;DP=576;FS=2.298;HRun=0;HaplotypeScore=111.8082;InbreedingCoeff=0.8997;MQ=73.56;MQ0=1;MQRankSum=-13.514;QD=48.30;ReadPosRankSum=-1.475;VQSLOD=4.4746;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:66.23:0,66,1390	0/0:4,0:4:12.04:0,12,241	0/0:23,0:23:33.11:0,33,606	0/0:21,0:21:30.10:0,30,522	1/1:6,19:26:48.11:1263,48,0	1/1:8,11:20:27.09:891,27,0	1/1:7,11:19:30.10:990,30,0	0/0:36,0:36:68.77:0,69,1214	1/1:11,14:28:36.12:1139,36,0	1/1:4,20:29:72.21:2003,72,0	1/1:5,11:16:27.09:861,27,0	0/0:21,0:21:45.15:0,45,924	0/0:20,0:20:33.11:0,33,664	1/1:5,22:29:60.21:1935,60,0	0/0:26,0:26:60.21:0,60,1218	0/1:24,1:25:35.92:36,0,1110	1/1:5,10:18:18.06:501,18,0	1/1:6,6:13:11.98:396,12,0	1/1:11,7:19:36.11:933,36,0	1/1:5,15:21:45.11:1343,45,0	1/1:8,5:12:9.50:271,10,0	0/0:17,0:17:45.15:0,45,922	0/0:18,0:18:42.14:0,42,872	0/0:12,0:12:21.07:0,21,443	1/1:6,11:17:27.09:886,27,0	1/1:6,12:21:45.15:1340,45,0	1/1:9,19:28:51:1674,51,0	1/1:1,2:3:9.03:297,9,0
chr10	53530236	.	AAATAAT	A	2388.91	PASS	AC=18;AF=0.346;AN=52;BaseQRankSum=1.312;DP=221;FS=5.707;HRun=0;HaplotypeScore=54.8105;InbreedingCoeff=0.7307;MQ=65.51;MQ0=1;MQRankSum=-7.723;QD=23.89;ReadPosRankSum=-2.331;VQSLOD=2.0476;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:30.09:0,30,884	0/0:3,0:3:9.03:0,9,298	./.	0/0:9,0:7:9.03:0,9,130	1/1:1,9:10:20.99:324,21,0	1/1:0,14:14:24.08:504,24,0	1/1:1,2:3:3.01:63,3,0	1/1:12,11:23:32.94:468,33,0	1/1:2,2:4:3.01:55,3,0	0/0:3,0:7:14.88:0,15,280	0/0:3,0:6:12.04:0,12,288	0/0:3,0:3:3.01:0,3,99	0/0:6,0:6:9.03:0,9,298	1/1:3,2:5:6.02:126,6,0	0/0:5,0:5:9.03:0,9,295	0/0:7,0:7:15.05:0,15,496	1/1:4,8:12:3.01:63,3,0	1/1:3,10:13:15.01:273,15,0	0/0:7,0:16:39.09:0,39,890	0/0:1,0:5:12.04:0,12,316	0/0:0,0:1:3.01:0,3,79	0/0:2,0:2:3.01:0,3,99	0/0:4,0:4:3.01:0,3,99	./.	1/1:2,14:16:33.11:692,33,0	0/0:4,0:9:20.79:0,21,347	0/0:5,0:15:27.09:0,27,708	0/0:3,0:7:18.06:0,18,464
chr10	53530649	.	T	TC	1254.86	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-7.539;DP=728;FS=0.651;HRun=1;HaplotypeScore=86.4164;InbreedingCoeff=0.9920;MQ=91.65;MQ0=0;MQRankSum=-2.788;QD=38.03;ReadPosRankSum=-5.539;VQSLOD=1.8499;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,141,1827	0/0:8,0:8:21.07:0,21,273	0/0:31,0:31:90.04:0,90,1100	0/0:28,0:28:57.85:0,58,774	0/0:27,0:27:63.94:0,64,995	0/0:20,0:20:57.18:0,57,739	0/0:21,0:21:63.20:0,63,818	1/1:2,31:33:93.28:1350,93,0	0/0:27,0:27:75.24:0,75,972	0/0:29,0:29:87.28:0,87,1118	0/0:26,0:26:75.24:0,75,974	0/0:24,0:24:72.22:0,72,921	0/0:25,0:25:75.24:0,75,971	0/0:23,0:23:69.22:0,69,896	0/0:20,0:20:60.19:0,60,778	0/0:35,0:35:99:0,105,1363	0/0:26,0:26:78.24:0,78,999	0/0:16,0:16:48.11:0,48,604	0/0:24,0:24:69.22:0,69,885	0/0:34,0:34:99:0,99,1271	0/0:33,0:33:90.25:0,90,1136	0/0:27,0:27:81.26:0,81,1051	0/0:18,0:18:51.17:0,51,662	0/0:29,0:29:87.27:0,87,1113	0/0:30,0:30:84.24:0,84,1061	0/0:31,0:31:90.27:0,90,1143	0/0:26,0:26:78.25:0,78,1012	0/0:7,0:7:21.03:0,21,242
chr10	53531056	.	T	TG	18516.79	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=-18.805;DP=773;FS=4.807;HRun=0;HaplotypeScore=70.4847;InbreedingCoeff=0.9854;MQ=82.33;MQ0=0;MQRankSum=-1.975;QD=42.47;ReadPosRankSum=2.068;VQSLOD=5.6048;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,150,2079	0/0:13,0:13:36.12:0,36,502	0/0:21,0:21:63.19:0,63,841	0/0:19,0:19:53.90:0,54,635	1/1:0,30:30:78.27:1246,78,0	1/1:0,14:14:39.13:623,39,0	1/1:2,30:32:84.29:1342,84,0	0/0:34,0:34:99:0,99,1369	1/1:0,33:33:84.29:1342,84,0	1/1:1,39:40:99:1779,117,0	1/1:0,20:20:57.11:880,57,0	0/0:28,0:28:81.26:0,81,1114	0/0:31,0:31:93.30:0,93,1284	1/1:0,17:17:48.16:767,48,0	0/0:34,0:34:99:0,99,1353	0/0:30,0:30:90.30:0,90,1257	1/1:2,22:24:51.17:815,51,0	1/1:0,16:16:42.14:660,42,0	1/1:1,21:22:57.17:886,57,0	1/1:0,30:30:84.08:1252,84,0	1/1:0,56:55:99:2541,160,0	0/0:31,0:31:93.28:0,93,1263	0/0:21,0:21:60.15:0,60,772	0/0:23,0:23:66.22:0,66,923	1/1:0,32:32:90.31:1438,90,0	1/1:0,33:33:93.30:1459,93,0	1/1:0,35:34:87.27:1390,87,0	1/1:0,2:2:6.02:96,6,0
chr10	53533942	.	C	CAAGAAGGAAGGA	11710.23	PASS	AB=1.000;AC=30;AF=0.536;AN=56;BaseQRankSum=-1.457;DP=546;FS=17.969;HRun=0;HaplotypeScore=163.3102;InbreedingCoeff=0.8396;MQ=69.28;MQ0=3;MQRankSum=-2.513;QD=36.59;ReadPosRankSum=-0.163;VQSLOD=3.3969;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:25:39.35:0,39,406	0/0:6,0:11:23.86:0,24,190	0/0:15,0:8:14.18:0,14,163	0/0:15,0:11:20.48:0,20,148	1/1:27,0:27:78.01:1012,78,0	1/1:5,0:26:21.03:539,21,0	1/1:15,0:14:39.94:519,40,0	0/0:25,0:25:57.49:0,57,567	1/1:2,18:24:9.01:296,9,0	1/1:27,0:27:81.12:1215,81,0	1/1:24,0:24:69.04:1165,69,0	0/0:22,0:22:60.09:0,60,1359	0/0:18,0:18:54.02:0,54,1061	1/1:6,9:18:18.06:916,18,0	0/0:17,0:18:54.09:0,54,1149	0/0:14,0:14:39.02:0,39,690	0/1:14,0:14:99:153,0,199	0/1:21,0:21:99:219,0,475	1/1:16,0:15:36.04:521,36,0	1/1:4,22:31:80.57:1433,81,0	1/1:9,0:9:23.98:204,24,0	0/0:29,0:29:87.01:0,87,1117	0/0:23,0:23:66.08:0,66,1150	0/0:11,0:11:33.02:0,33,850	1/1:5,9:16:18.06:936,18,0	1/1:30,0:30:60.16:1546,60,0	1/1:16,0:14:51:905,51,0	1/1:5,0:5:15:131,15,0
chr10	53533946	.	AAG	A	30.14	PASS	AB=0.739;AC=1;AF=0.018;AN=56;BaseQRankSum=3.743;DP=538;FS=0.000;HRun=0;HaplotypeScore=86.2099;InbreedingCoeff=-0.0218;MQ=66.11;MQ0=4;MQRankSum=1.787;QD=1.77;ReadPosRankSum=0.216;VQSLOD=1.3034;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:63.21:0,63,970	0/0:11,0:11:24.08:0,24,368	0/0:14,0:7:18.03:0,18,239	0/0:13,0:9:17.08:0,17,210	0/0:26,0:26:73.19:0,73,796	0/0:22,0:22:20.94:0,21,357	0/0:17,0:16:47.90:0,48,564	0/0:27,0:27:76.25:0,76,947	0/0:23,0:23:9.91:0,10,138	0/0:29,0:29:84.30:0,84,849	0/0:25,0:25:74.84:0,75,887	0/0:22,0:22:66.23:0,66,1222	0/0:19,0:19:57.19:0,57,983	0/0:16,0:16:24.08:0,24,468	0/0:17,0:17:47.27:0,47,820	0/0:13,0:13:39.13:0,39,653	0/1:11,6:17:90.28:105,0,90	0/0:19,0:19:56.29:0,56,682	0/0:12,0:11:32.77:0,33,330	0/0:27,0:27:67.47:0,67,1053	0/0:9,0:9:23.92:0,24,188	0/0:30,0:30:80.95:0,81,1359	0/0:23,0:23:69.24:0,69,1230	0/0:14,0:14:36.59:0,37,637	0/0:15,0:15:18.53:0,19,354	0/0:28,0:27:78.94:0,79,894	0/0:18,0:15:54.02:0,54,686	0/0:5,0:5:14.94:0,15,114
chr10	53534519	.	A	ACCCCAC	29582.85	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-7.710;DP=717;FS=32.978;HRun=0;HaplotypeScore=126.0140;InbreedingCoeff=0.9814;MQ=76.44;MQ0=0;MQRankSum=-16.638;QD=67.85;ReadPosRankSum=-0.664;VQSLOD=3.1932;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,105,2396	0/0:23,0:23:66.21:0,66,1516	0/0:24,0:24:59.17:0,59,1202	0/0:20,0:20:54.09:0,54,940	1/1:0,28:38:69.19:1873,69,0	1/1:1,31:37:84.29:2811,84,0	1/1:1,12:19:27.09:968,27,0	1/1:3,34:51:99:4100,144,0	1/1:1,28:32:69.24:2408,69,0	1/1:0,33:37:99:3237,102,0	1/1:0,19:22:48.16:1719,48,0	0/0:19,0:19:57.20:0,57,1328	0/0:28,0:28:81.24:0,81,1733	1/1:0,14:16:39.13:1398,39,0	0/0:28,0:28:84.22:0,84,1756	0/0:21,0:21:63.20:0,63,1449	1/1:0,15:17:30.06:915,30,0	1/1:0,8:10:18.06:599,18,0	1/1:0,10:23:69.11:1706,69,0	1/1:4,30:42:83.99:2332,84,0	1/1:0,5:14:6.02:215,6,0	0/0:25,0:25:75.23:0,75,1667	0/0:39,0:39:99:0,108,2520	0/0:18,0:18:51.18:0,51,1226	1/1:0,20:24:48.16:1716,48,0	1/1:1,17:20:51.16:1559,51,0	1/1:1,18:28:42.14:1487,42,0	1/1:0,6:6:15.05:539,15,0
chr10	53535023	.	AC	A	5864.96	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=12.115;DP=631;FS=0.000;HRun=4;HaplotypeScore=63.7076;InbreedingCoeff=0.9948;MQ=91.93;MQ0=0;MQRankSum=-1.581;QD=33.32;ReadPosRankSum=2.982;VQSLOD=5.4118;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:96.31:0,96,1327	0/0:18,0:18:54.18:0,54,754	0/0:22,0:22:66.21:0,66,893	0/0:32,0:32:87.23:0,87,1125	0/0:21,0:21:57.15:0,57,780	0/0:21,0:21:57.19:0,57,798	0/0:33,0:33:93.31:0,93,1302	0/0:23,0:23:66.22:0,66,923	0/0:22,0:22:63.21:0,63,882	1/1:1,20:21:60.18:720,60,0	1/1:1,20:21:54.17:648,54,0	0/0:16,0:16:45.14:0,45,614	0/0:13,0:13:39.13:0,39,546	0/0:16,0:16:42.02:0,42,571	0/0:14,0:14:42.13:0,42,563	0/0:17,0:17:48.16:0,48,672	0/0:28,0:28:84.26:0,84,1144	0/0:25,0:25:72.21:0,72,985	1/1:1,18:19:54.16:648,54,0	1/1:3,36:39:99:1224,102,0	1/1:0,24:24:69.21:828,69,0	0/0:33,0:33:84.26:0,84,1156	0/0:28,0:28:72.24:0,72,1007	0/0:17,0:17:51.17:0,51,714	0/0:22,0:22:57.17:0,57,763	1/1:0,18:18:54.17:647,54,0	1/1:0,28:28:84.26:1007,84,0	1/1:1,5:6:12.04:144,12,0
chr10	53537975	.	G	GAA	2870.56	PASS	AB=0.982;AC=28;AF=0.500;AN=56;BaseQRankSum=13.330;DP=463;FS=0.421;HRun=3;HaplotypeScore=120.8307;InbreedingCoeff=0.1489;MQ=38.65;MQ0=20;MQRankSum=-7.621;QD=9.32;ReadPosRankSum=-0.708;VQSLOD=-0.0562;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:10.15:0,10,636	0/1:12,0:11:5.58:6,0,221	0/0:5,0:1:3.01:0,3,45	0/1:7,0:1:0:0,0,0	1/1:17,0:16:23.64:167,24,0	1/1:12,0:11:10.55:79,11,0	1/1:15,0:13:16.59:180,17,0	0/0:23,0:18:45.14:0,45,650	1/1:12,0:12:23.61:154,24,0	0/1:26,0:22:99:374,0,213	0/1:10,0:9:78.15:182,0,78	0/0:18,0:18:2.16:0,2,631	0/1:25,0:23:32.49:32,0,834	1/1:14,0:13:14.91:118,15,0	0/0:24,0:24:23.49:0,23,540	0/0:13,0:12:3.45:0,3,244	0/1:11,4:13:25.29:220,0,25	1/1:11,0:7:9.55:180,10,0	0/1:11,0:10:99:126,0,164	0/1:22,0:21:99:179,0,332	0/1:4,0:3:0.04:0,0,0	0/1:26,0:26:40.28:40,0,757	0/0:19,0:18:42.13:0,42,610	0/0:29,0:28:18.93:0,19,863	1/1:16,0:15:11.26:53,11,0	0/1:18,0:18:75.61:370,0,76	0/1:21,0:20:99:293,0,178	1/1:14,0:9:21.07:293,21,0
chr10	53537976	.	AG	A	547.43	PASS	AB=0.710;AC=15;AF=0.288;AN=52;BaseQRankSum=10.088;DP=456;FS=4.401;HRun=1;HaplotypeScore=116.5116;InbreedingCoeff=0.1202;MQ=38.79;MQ0=20;MQRankSum=-7.330;QD=2.98;ReadPosRankSum=1.825;VQSLOD=0.1895;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:45.48:0,45,762	0/0:12,1:12:24.43:0,24,276	0/0:5,0:1:3.01:0,3,48	./.	0/0:16,1:16:15.17:0,15,158	0/1:6,5:10:3.97:11,0,4	1/1:10,5:13:7.50:42,8,0	0/0:23,0:18:48.16:0,48,749	0/1:8,4:12:9.76:10,0,28	0/1:12,12:20:95.60:96,0,293	0/1:5,5:9:50.70:51,0,126	0/0:18,0:18:50.79:0,51,781	0/0:23,2:23:32.90:0,33,926	0/1:11,3:13:10.33:10,0,15	0/0:24,0:24:52.23:0,52,658	0/0:13,0:12:20.23:0,20,279	1/1:10,4:12:9.69:89,10,0	0/0:10,1:7:0.46:0,0,40	0/1:7,4:10:42.60:43,0,250	0/1:16,6:21:44.04:44,0,389	./.	0/0:24,2:26:47.09:0,47,939	0/0:19,0:18:42.14:0,42,671	0/0:27,1:28:37.72:0,38,1003	0/0:11,4:14:10.68:0,11,80	0/1:5,12:17:99:112,0,118	0/1:11,9:19:89:89,0,206	1/1:6,8:9:20.21:110,20,0
chr10	53537978	.	AG	A	572.89	PASS	AB=0.732;AC=15;AF=0.288;AN=52;BaseQRankSum=11.282;DP=458;FS=4.276;HRun=1;HaplotypeScore=115.1884;InbreedingCoeff=0.0289;MQ=39.26;MQ0=20;MQRankSum=-8.698;QD=2.97;ReadPosRankSum=2.233;VQSLOD=0.2272;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:35.85:0,36,759	0/0:12,1:12:23.97:0,24,283	0/0:5,0:1:3.01:0,3,48	./.	0/0:16,1:16:9.56:0,10,150	0/1:6,5:10:6.56:11,0,7	1/1:10,5:13:15.23:59,15,0	0/0:23,0:18:48.16:0,48,731	0/1:7,4:11:17.23:17,0,26	0/1:12,12:20:95.32:95,0,271	0/1:5,5:9:50.72:51,0,100	0/0:18,0:18:54.10:0,54,815	0/0:24,2:24:35.71:0,36,949	0/1:11,3:13:9.05:9,0,22	0/0:23,0:23:52.84:0,53,564	0/0:13,0:12:20.24:0,20,274	0/1:11,4:13:2.50:79,0,3	0/1:10,1:7:5.52:6,0,31	0/1:7,4:10:42.61:43,0,208	0/1:16,6:21:46.63:47,0,308	./.	0/0:24,2:26:47.12:0,47,941	0/0:22,0:21:48.15:0,48,730	0/0:29,1:29:47.75:0,48,1023	0/0:11,4:14:11.35:0,11,94	0/1:3,12:15:97.55:116,0,98	0/1:11,9:19:90.87:91,0,178	1/1:6,8:9:20.21:110,20,0
chr10	53537979	.	GAGAAAGAA	G	6358.06	PASS	AB=1.000;AC=30;AF=0.536;AN=56;BaseQRankSum=11.169;DP=472;FS=1.903;HRun=0;HaplotypeScore=151.2002;InbreedingCoeff=0.6765;MQ=38.89;MQ0=20;MQRankSum=-10.065;QD=25.33;ReadPosRankSum=0.854;VQSLOD=4.7153;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:25:58.58:0,59,1782	0/0:12,0:11:23.96:0,24,606	0/0:5,0:1:3.01:0,3,118	0/1:8,0:1:0:0,0,0	1/1:2,16:17:33.11:579,33,0	1/1:8,6:13:18.06:351,18,0	1/1:6,9:13:14.65:320,15,0	0/0:23,0:18:44.61:0,45,353	1/1:5,7:12:30.10:676,30,0	1/1:25,0:21:53.05:883,53,0	1/1:11,0:10:29.38:376,29,0	0/0:18,0:18:51.17:0,51,1729	0/0:26,0:24:52.98:0,53,2067	1/1:5,10:14:21.07:455,21,0	0/0:22,0:22:51.62:0,52,1070	0/0:13,0:12:5.54:0,6,524	0/1:16,0:14:1.61:2,0,51	0/1:12,0:8:40.41:88,0,40	1/1:12,0:11:2.53:174,3,0	1/1:22,0:21:11.35:295,11,0	1/1:3,0:2:2.60:10,3,0	0/0:25,0:25:59.85:0,60,2044	0/0:22,0:21:51.13:0,51,1705	0/0:30,0:29:75.07:0,75,2432	1/1:5,10:14:21.07:477,21,0	1/1:16,0:16:42.10:849,42,0	1/1:22,0:21:5.34:375,5,0	0/1:15,0:10:17.89:449,0,18
chr10	53537981	.	GAA	G	1138.61	PASS	AB=0.986;AC=24;AF=0.429;AN=56;BaseQRankSum=13.072;DP=473;FS=3.164;HRun=3;HaplotypeScore=128.2629;InbreedingCoeff=0.3594;MQ=39.16;MQ0=20;MQRankSum=-8.708;QD=4.54;ReadPosRankSum=2.663;VQSLOD=0.1917;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:61.31:0,61,977	0/0:12,0:11:16.79:0,17,242	0/0:5,0:1:3.01:0,3,58	0/1:7,0:1:0:0,0,0	0/1:19,0:18:30.07:30,0,56	1/1:14,0:13:15.22:62,15,0	1/1:16,0:14:19.13:84,19,0	0/0:23,0:18:48:0,48,688	1/1:12,0:12:27.07:116,27,0	0/1:25,0:21:99:121,0,147	0/1:12,0:11:58.70:59,0,89	0/0:17,0:17:51.16:0,51,930	0/0:27,0:25:34.01:0,34,1122	1/1:16,0:15:17.09:73,17,0	0/0:22,0:22:53.80:0,54,628	0/0:14,0:13:24.02:0,24,307	1/1:13,2:14:2.60:89,3,0	1/1:8,4:8:20.04:224,20,0	0/1:12,0:11:45.88:46,0,121	0/1:22,0:21:51.02:51,0,306	0/0:4,0:3:5.70:0,6,31	0/0:24,0:24:33.46:0,33,961	0/0:21,0:20:54.09:0,54,864	0/0:30,0:29:70.50:0,71,1195	1/1:14,0:14:6.81:47,7,0	0/1:16,0:16:53.56:128,0,54	0/1:23,0:22:99:103,0,166	1/1:15,0:10:4.76:93,5,0
chr10	53537985	.	GAA	G	2091.78	PASS	AB=0.958;AC=24;AF=0.429;AN=56;BaseQRankSum=12.584;DP=474;FS=0.420;HRun=3;HaplotypeScore=124.2156;InbreedingCoeff=0.1936;MQ=40.23;MQ0=19;MQRankSum=-9.983;QD=7.66;ReadPosRankSum=1.975;VQSLOD=0.3742;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:74.97:0,75,1235	0/1:10,1:11:18.02:18,0,321	0/0:5,0:1:3.01:0,3,58	0/1:8,0:1:0:0,0,0	1/1:16,3:18:16.10:147,16,0	1/1:8,6:13:17.83:173,18,0	0/1:12,4:14:1.80:169,0,2	0/1:23,0:18:37.85:38,0,335	1/1:7,5:12:29.48:256,29,0	0/1:24,3:23:99:301,0,103	0/1:12,0:11:11.34:122,0,11	0/0:17,0:17:51.11:0,51,876	0/0:27,0:25:72.36:0,72,1098	1/1:11,5:15:23.33:229,23,0	0/0:22,0:22:44.28:0,44,570	0/0:14,0:13:25.72:0,26,384	0/0:15,0:14:17.73:0,18,121	0/1:13,0:9:1.01:1,0,80	0/1:9,0:8:56.73:57,0,58	0/1:22,0:22:47.36:47,0,137	1/1:4,0:3:5.49:23,5,0	0/0:22,0:22:55.88:0,56,966	0/0:22,0:21:60.17:0,60,1000	0/0:30,0:29:72.20:0,72,1284	1/1:10,4:14:13.54:89,14,0	0/1:15,1:16:37.78:302,0,38	0/1:22,0:21:99:124,0,126	0/1:14,1:10:20.31:178,0,20
chr10	53537987	.	AAG	A	2056.09	PASS	AB=0.964;AC=26;AF=0.464;AN=56;BaseQRankSum=11.085;DP=480;FS=2.040;HRun=0;HaplotypeScore=125.9646;InbreedingCoeff=0.3788;MQ=40.21;MQ0=21;MQRankSum=-10.004;QD=7.62;ReadPosRankSum=-0.091;VQSLOD=3.5682;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:27:73.60:0,74,1094	0/1:10,0:10:1.56:2,0,309	0/0:6,0:1:3.01:0,3,44	0/1:10,0:1:0:0,0,0	0/1:21,0:20:12.40:12,0,67	1/1:12,0:13:15.52:75,16,0	0/1:16,0:15:24.35:64,0,24	0/1:23,0:18:99:189,0,143	1/1:13,0:13:25.16:119,25,0	1/1:27,0:23:1.77:260,2,0	1/1:11,0:10:24.01:215,24,0	0/0:16,0:16:42.13:0,42,668	0/0:26,0:24:51.16:0,51,807	1/1:16,0:15:18.22:96,18,0	0/0:21,0:21:33.10:0,33,509	0/0:14,0:13:24.08:0,24,380	0/0:16,0:15:21.69:0,22,147	0/0:12,0:9:15.22:0,15,103	1/1:6,4:9:1.15:169,1,0	1/1:16,6:22:14.10:223,14,0	1/1:5,0:4:6.02:63,6,0	0/0:21,0:21:51.17:0,51,831	0/0:21,0:20:54.18:0,54,848	0/0:30,0:29:72.22:0,72,1125	0/1:16,0:16:11.56:27,0,12	1/1:16,1:17:3.30:222,3,0	0/1:13,9:21:30.25:353,0,30	0/1:16,0:11:12.95:150,0,13
chr10	53537989	.	G	GAA	2982.37	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=10.821;DP=491;FS=3.675;HRun=3;HaplotypeScore=127.8731;InbreedingCoeff=0.6180;MQ=40.36;MQ0=22;MQRankSum=-11.534;QD=10.61;ReadPosRankSum=-2.223;VQSLOD=-0.3213;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:68.43:0,68,1013	0/1:10,0:10:0.45:0,0,296	0/0:9,0:1:3.01:0,3,46	0/1:11,0:2:0:0,0,0	1/1:22,0:21:13.40:102,13,0	1/1:14,0:13:3.65:100,4,0	0/1:17,0:15:15.11:87,0,15	0/1:25,0:20:50.32:186,0,50	1/1:13,0:13:17.62:137,18,0	1/1:27,0:23:19.71:397,20,0	1/1:10,0:9:26.98:254,27,0	0/0:16,0:16:45.12:0,45,644	0/0:26,0:24:55.98:0,56,863	1/1:17,0:16:0.25:82,0,0	0/0:19,0:19:33.10:0,33,482	0/0:14,0:13:24.08:0,24,361	0/0:17,0:16:18.10:0,18,84	0/0:12,0:9:20.07:0,20,93	1/1:11,0:10:26.63:259,27,0	1/1:23,1:24:45.75:427,46,0	1/1:3,2:4:6.02:101,6,0	0/0:20,0:20:49.59:0,50,793	0/0:21,0:20:60.17:0,60,846	0/0:30,0:29:75.16:0,75,1068	0/1:16,0:16:37.44:37,0,43	1/1:16,1:17:20.66:325,21,0	1/1:22,3:24:13.08:484,13,0	1/1:17,0:12:15.07:200,15,0
chr10	53538015	.	GAGAA	G	4804.19	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=7.938;DP=582;FS=30.202;HRun=0;HaplotypeScore=152.8717;InbreedingCoeff=0.8900;MQ=49.71;MQ0=16;MQRankSum=-4.898;QD=26.11;ReadPosRankSum=2.679;VQSLOD=2.7691;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:61.76:0,62,1383	0/0:10,0:10:27.09:0,27,595	0/0:35,0:11:22.73:0,23,336	0/1:46,0:13:4.63:5,0,221	0/0:24,0:27:26.28:0,26,295	0/0:14,0:16:15.26:0,15,154	0/0:15,0:15:18.95:0,19,187	0/0:25,0:21:33.39:0,33,411	0/0:17,0:19:8.97:0,9,67	1/1:24,1:22:54.17:791,54,0	1/1:11,0:11:33.11:464,33,0	0/0:15,0:15:45.15:0,45,1090	0/0:23,0:23:59.21:0,59,1261	0/0:17,0:19:19.37:0,19,224	0/0:16,0:16:45.15:0,45,1031	0/0:19,0:19:21.73:0,22,1023	0/0:17,0:17:21.27:0,21,177	0/0:9,0:9:4.18:0,4,138	1/1:6,6:12:18.06:283,18,0	1/1:1,19:20:48.15:736,48,0	1/1:1,9:10:12.04:196,12,0	0/0:19,0:19:48.15:0,48,1003	0/0:24,0:23:63.22:0,63,1395	0/0:36,0:36:93.22:0,93,2061	0/0:17,0:18:17.87:0,18,134	1/1:11,12:23:60.19:922,60,0	1/1:0,21:20:51.17:855,51,0	1/1:8,7:14:21.23:554,21,0
chr10	53538756	.	A	AC	282.89	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-5.371;DP=601;FS=7.836;HRun=6;HaplotypeScore=59.5248;InbreedingCoeff=0.7913;MQ=44.76;MQ0=92;MQRankSum=-5.130;QD=11.32;ReadPosRankSum=-2.669;VQSLOD=0.9645;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:35:48.10:0,48,490	0/0:9,0:8:15.03:0,15,153	0/0:14,0:6:9.02:0,9,92	0/0:15,0:5:8.98:0,9,81	0/0:18,0:13:21.03:0,21,208	0/0:21,0:18:27.06:0,27,275	0/0:16,0:12:15.03:0,15,153	1/1:10,15:14:30.10:377,30,0	0/0:18,0:16:24.01:0,24,244	0/0:21,0:13:39.09:0,39,398	0/0:27,0:24:45.03:0,45,442	0/0:21,0:17:26.57:0,27,268	0/0:9,0:7:8.95:0,9,91	0/0:27,0:22:36.04:0,36,367	0/0:30,0:25:48.11:0,48,489	0/0:18,0:12:27.06:0,27,275	0/0:38,0:36:51.09:0,51,513	0/0:12,0:9:12.50:0,12,123	0/0:22,0:19:45.04:0,45,441	0/0:17,0:15:30.05:0,30,295	0/0:34,0:28:30.01:0,30,291	0/0:17,0:12:18.04:0,18,184	0/0:18,0:16:27.01:0,27,264	0/0:18,0:16:21.05:0,21,214	0/0:20,0:17:39.05:0,39,388	0/0:24,0:17:45.08:0,45,452	0/0:24,0:22:53.76:0,54,544	0/0:28,0:23:40.90:0,41,401
chr10	53540683	.	T	TAA	1630.39	PASS	AB=0.667;AC=33;AF=0.589;AN=56;BaseQRankSum=0.738;DP=242;FS=20.565;HRun=12;HaplotypeScore=29.9685;InbreedingCoeff=0.6564;MQ=55.24;MQ0=17;MQRankSum=-2.412;QD=10.87;ReadPosRankSum=-1.274;VQSLOD=-0.0147;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:14:15.85:0,16,239	0/0:2,0:2:6.01:0,6,56	0/0:8,0:5:11.74:0,12,93	0/0:5,0:5:11.57:0,12,75	1/1:1,1:1:3.01:42,3,0	1/1:6,8:11:21.07:295,21,0	1/1:3,3:5:11.99:145,12,0	1/1:7,1:21:37.94:163,38,0	0/1:3,2:4:21.75:36,0,22	1/1:3,0:6:3:29,3,0	1/1:3,0:1:2.88:15,3,0	0/0:9,0:9:14.97:0,15,139	0/0:14,0:13:24:0,24,221	1/1:1,6:7:9.03:126,9,0	0/0:7,0:6:9:0,9,79	0/0:13,0:11:24.02:0,24,222	1/1:6,10:15:29.07:354,29,0	1/1:2,4:5:6.02:84,6,0	1/1:5,0:11:17.89:139,18,0	1/1:1,0:1:0.47:1,0,0	1/1:3,1:10:12.02:114,12,0	0/0:2,0:1:3:0,3,28	0/0:4,0:3:5.96:0,6,54	0/0:11,0:12:23.84:0,24,268	1/1:2,0:2:2.96:20,3,0	1/1:4,0:15:24.61:208,25,0	1/1:7,0:6:4.33:23,4,0	1/1:6,0:5:3:29,3,0
chr10	53540888	.	AAAT	A	993.66	PASS	AC=26;AF=0.650;AN=40;BaseQRankSum=5.587;DP=125;FS=2.413;HRun=0;HaplotypeScore=23.1934;InbreedingCoeff=0.5022;MQ=60.41;MQ0=0;MQRankSum=-0.817;QD=14.61;ReadPosRankSum=2.983;VQSLOD=2.4887;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/0:2,0:2:6.02:0,6,115	./.	./.	1/1:1,1:2:3.01:40,3,0	1/1:1,5:6:15.05:201,15,0	1/1:1,2:3:3.01:40,3,0	0/0:24,0:24:30.10:0,30,532	./.	1/1:3,0:3:2.92:17,3,0	1/1:2,0:4:2.75:20,3,0	0/0:4,0:4:6.02:0,6,117	0/0:4,0:4:6.02:0,6,116	./.	0/0:2,0:2:3.01:0,3,58	0/0:2,0:2:3.01:0,3,58	1/1:3,15:18:36.12:483,36,0	1/1:5,4:9:9.03:121,9,0	1/1:1,0:6:5.92:42,6,0	1/1:0,0:1:2.98:21,3,0	./.	./.	./.	0/0:1,0:1:3.01:0,3,58	1/1:2,1:3:3.01:40,3,0	1/1:2,0:4:2.98:21,3,0	1/1:1,0:2:2.98:21,3,0	1/1:4,0:7:8.93:63,9,0
chr10	53541322	.	CGACA	C	4046.30	PASS	AB=1.000;AC=33;AF=0.611;AN=54;BaseQRankSum=11.318;DP=640;FS=1.783;HRun=0;HaplotypeScore=126.9821;InbreedingCoeff=0.7478;MQ=68.90;MQ0=4;MQRankSum=-2.849;QD=11.63;ReadPosRankSum=2.058;VQSLOD=3.0133;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,1:42:20.87:0,21,1359	0/0:11,0:11:9.03:0,9,211	0/0:37,0:30:3.01:0,3,37	0/0:53,0:39:0.30:0,0,1	1/1:8,0:15:3:28,3,0	1/1:7,0:17:3:28,3,0	./.	1/1:25,0:24:3:25,3,0	1/1:9,0:27:23.98:215,24,0	1/1:13,12:25:33.11:507,33,0	1/1:15,6:21:8.94:109,9,0	0/0:21,0:21:42.08:0,42,788	0/0:25,0:25:33.09:0,33,676	1/1:8,0:23:27.01:244,27,0	0/0:24,0:24:45.13:0,45,974	0/0:19,0:19:18.06:0,18,409	1/1:15,10:26:23.67:333,24,0	1/1:6,8:14:15.18:273,15,0	1/1:16,5:19:15.05:231,15,0	1/1:14,11:25:27.01:387,27,0	1/1:17,10:27:12.04:185,12,0	0/0:9,0:9:6.02:0,6,138	0/1:11,0:11:2.91:3,0,293	0/0:33,1:35:4.95:0,5,1019	1/1:7,0:15:11.61:93,12,0	1/1:11,11:22:33.11:508,33,0	1/1:8,15:24:36.12:555,36,0	1/1:2,8:10:21.07:324,21,0
chr10	53543191	.	C	CGTGTGTGTGT	1807.12	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=7.482;DP=822;FS=4.198;HRun=0;HaplotypeScore=282.6297;InbreedingCoeff=0.8612;MQ=58.53;MQ0=1;MQRankSum=-7.745;QD=6.95;ReadPosRankSum=-4.235;VQSLOD=1.4671;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,123,2969	0/0:13,0:13:36.05:0,36,900	0/0:20,0:15:29.63:0,30,513	0/0:23,0:20:15.42:0,15,486	1/1:29,0:27:11.15:94,11,0	1/1:29,2:31:8.20:215,8,0	1/1:35,0:35:23.80:237,24,0	0/0:35,0:35:91.53:0,92,2018	1/1:32,2:34:9.67:381,10,0	0/0:49,0:49:99:0,132,3335	0/0:18,0:18:45.11:0,45,1212	0/0:32,0:32:73.06:0,73,1947	0/0:40,0:40:99:0,111,2898	1/1:34,1:35:5.49:112,5,0	0/0:35,0:35:96.19:0,96,2565	0/0:21,0:21:60.11:0,60,1697	1/1:29,0:28:32.54:291,33,0	1/1:16,0:16:26.53:461,27,0	0/0:26,0:26:73.40:0,73,1526	0/0:34,0:34:92.98:0,93,2298	0/0:51,0:51:99:0,144,3278	0/0:28,0:28:78.24:0,78,2273	0/0:18,0:18:45.38:0,45,879	0/0:28,0:28:72.13:0,72,1906	1/1:30,1:30:12.24:181,12,0	0/0:28,0:28:81.22:0,81,2184	0/0:19,0:19:50.72:0,51,1005	0/1:20,0:20:32.21:32,0,1346
chr10	53543193	.	TGC	T	649.52	PASS	AB=0.825;AC=15;AF=0.268;AN=56;BaseQRankSum=8.572;DP=816;FS=0.000;HRun=0;HaplotypeScore=174.3030;InbreedingCoeff=0.8179;MQ=57.00;MQ0=1;MQRankSum=-4.987;QD=2.73;ReadPosRankSum=-3.936;VQSLOD=1.6614;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,132,2377	0/0:13,0:13:39.09:0,39,691	0/0:17,0:12:29.27:0,29,407	0/0:20,0:17:36.59:0,37,570	1/1:18,11:27:8.92:74,9,0	1/1:20,10:30:0.55:41,1,0	1/1:28,6:34:15.45:103,15,0	0/0:36,0:36:88.21:0,88,1740	0/1:26,7:33:12.13:52,0,12	0/0:49,0:49:99:0,141,2543	0/0:17,0:17:51.16:0,51,909	0/0:32,0:32:72.96:0,73,1393	0/0:40,0:40:99:0,120,2105	1/1:9,26:35:2.98:34,3,0	0/0:34,0:34:96.32:0,96,1808	0/0:22,0:22:63.22:0,63,1179	1/1:25,4:28:23.50:161,24,0	1/1:10,6:16:24.81:234,25,0	0/0:29,0:29:84.02:0,84,1303	0/0:34,0:34:99:0,99,1752	0/0:52,0:52:99:0,150,2608	0/0:27,0:27:78.27:0,78,1489	0/0:18,0:18:45.05:0,45,747	0/0:28,0:28:75.21:0,75,1382	1/1:22,10:31:16.19:134,16,0	0/0:28,0:28:81.23:0,81,1491	0/0:18,0:18:51.16:0,51,931	0/0:20,0:20:60.21:0,60,1114
chr10	53543195	.	C	CGTGTGTGTGTGTGTGTCT	10730.39	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=11.186;DP=827;FS=19.110;HRun=0;HaplotypeScore=438.6382;InbreedingCoeff=0.9434;MQ=56.55;MQ0=1;MQRankSum=-8.912;QD=43.80;ReadPosRankSum=-0.194;VQSLOD=2.3266;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,123,4374	0/0:14,0:14:39.07:0,39,1147	0/0:16,0:11:12.92:0,13,374	0/0:19,0:16:8.86:0,9,243	1/1:28,0:26:2.20:71,2,0	1/1:29,1:31:21.80:871,22,0	1/1:34,0:34:32.96:937,33,0	0/0:36,0:36:93.02:0,93,2924	1/1:32,1:34:47.77:2709,48,0	0/0:48,0:48:99:0,129,4741	0/0:19,0:19:48.16:0,48,1941	0/0:28,0:28:57.64:0,58,2814	0/0:40,0:40:99:0,108,4343	1/1:35,1:36:26.87:1168,27,0	0/0:34,0:34:93.31:0,93,3660	0/0:23,0:23:63.20:0,63,2497	1/1:31,0:29:39.13:2063,39,0	1/1:18,0:18:29.43:1754,29,0	0/0:29,0:29:68.57:0,69,2176	0/0:34,0:34:87.26:0,87,3456	0/0:53,0:53:99:0,132,4339	0/0:28,0:28:75.26:0,75,3175	0/0:17,0:17:35.90:0,36,1218	0/0:29,0:29:77.93:0,78,2912	1/1:32,1:32:30:1156,30,0	0/0:31,0:31:75.24:0,75,2648	0/0:18,0:18:48.15:0,48,1341	0/0:20,0:20:9.92:0,10,2091
chr10	53543358	.	ATG	A	2130.08	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=8.283;DP=1054;FS=0.000;HRun=0;HaplotypeScore=160.8007;InbreedingCoeff=0.7162;MQ=57.16;MQ0=8;MQRankSum=0.320;QD=19.54;ReadPosRankSum=1.167;VQSLOD=3.5100;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:52,3:54:12.89:0,13,1825	0/0:15,0:15:36.12:0,36,598	0/0:49,0:30:53.78:0,54,821	0/0:47,0:37:68.07:0,68,992	0/0:25,1:26:31.39:0,31,1043	0/0:29,1:30:19.31:0,19,828	0/0:44,0:44:93.25:0,93,1482	0/0:45,1:47:63.01:0,63,1510	0/0:40,3:43:14.60:0,15,1305	0/0:49,0:49:99:0,129,2109	0/0:16,0:16:42.08:0,42,627	0/0:37,1:38:58.47:0,58,1498	0/0:32,0:32:84.27:0,84,1356	0/0:39,1:40:43.39:0,43,1225	0/0:39,0:38:87.30:0,87,1428	0/0:29,0:29:78.25:0,78,1252	1/1:8,38:45:99:1547,126,0	1/1:8,14:21:57.06:680,57,0	0/0:29,2:31:37.37:0,37,1111	0/0:34,0:34:78.25:0,78,1248	0/0:90,6:94:66.57:0,67,3722	0/1:40,0:40:32.01:32,0,1431	0/0:29,0:29:78.25:0,78,1268	0/0:38,5:41:17.55:0,18,1330	0/0:16,1:16:4.36:0,4,585	0/0:37,0:37:99:0,105,1684	0/0:24,0:24:60.12:0,60,911	0/0:35,0:34:68.02:0,68,1069
chr10	53543487	.	C	CTG	7602.29	PASS	AB=0.641;AC=12;AF=0.214;AN=56;BaseQRankSum=3.199;DP=1059;FS=20.080;HRun=0;HaplotypeScore=154.0442;InbreedingCoeff=0.5716;MQ=55.36;MQ0=18;MQRankSum=2.014;QD=24.93;ReadPosRankSum=0.604;VQSLOD=4.2027;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:43:80.20:0,80,934	0/0:10,0:10:21.07:0,21,258	0/0:36,0:4:4.31:0,4,14	0/0:43,0:5:9.03:0,9,105	0/0:20,0:17:18.03:0,18,221	0/0:34,0:34:87.24:0,87,1045	0/0:27,0:27:59.24:0,59,669	0/0:56,0:50:99:0,105,1250	0/0:49,0:49:99:0,102,1448	1/1:28,18:39:84.29:1348,84,0	0/1:6,19:24:34.45:499,0,34	0/0:38,0:41:98.43:0,98,1116	0/0:24,0:25:60.02:0,60,714	0/0:47,0:47:98.31:0,98,1160	0/0:40,0:41:96.11:0,96,1134	0/0:41,0:41:99:0,99,1189	0/0:41,0:41:91.44:0,91,1105	0/0:42,0:41:86.79:0,87,978	0/1:10,15:24:4.68:666,0,5	1/1:8,14:22:30.07:478,30,0	0/1:50,56:102:16.07:2792,0,16	0/0:33,0:33:84.26:0,84,1032	0/0:24,0:24:45.09:0,45,513	0/0:70,0:71:99:0,162,1934	0/0:19,0:15:8.58:0,9,110	0/1:21,13:31:19.70:695,0,20	1/1:8,21:29:51.17:816,51,0	1/1:6,9:15:19.04:308,19,0
chr10	53543665	.	CTG	C	18846.66	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=17.402;DP=1104;FS=10.377;HRun=0;HaplotypeScore=170.0850;InbreedingCoeff=0.9995;MQ=61.62;MQ0=8;MQRankSum=0.444;QD=28.69;ReadPosRankSum=2.969;VQSLOD=6.1910;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:51:99:0,126,2011	0/0:9,0:9:24.08:0,24,404	0/0:44,1:35:26.12:0,26,763	0/0:48,0:34:71.47:0,71,1019	1/1:2,25:27:54.17:702,54,0	1/1:2,36:38:87.28:1131,87,0	1/1:10,28:38:78.22:999,78,0	1/1:13,26:36:75.17:913,75,0	1/1:1,56:57:99:1443,111,0	1/1:10,64:74:99:2354,187,0	1/1:1,17:18:39.12:507,39,0	0/0:32,0:32:93.29:0,93,1518	0/0:36,1:37:63.34:0,63,1619	1/1:2,35:37:75.24:975,75,0	0/0:50,0:50:99:0,144,2323	0/0:50,2:52:57.42:0,57,2084	1/1:7,19:26:40.50:735,41,0	1/1:3,20:23:60.20:780,60,0	1/1:7,14:18:33.09:406,33,0	1/1:1,42:44:99:1365,105,0	1/1:21,56:75:99:2356,187,0	0/0:32,1:33:48.29:0,48,1389	0/0:36,0:36:84.22:0,84,1393	0/0:50,0:49:99:0,114,1875	1/1:2,34:36:75.24:975,75,0	1/1:5,47:52:99:1683,132,0	1/1:3,26:29:66.21:858,66,0	1/1:0,20:19:51.17:663,51,0
chr10	53543809	.	CTG	C	6288.37	PASS	AB=0.543;AC=15;AF=0.268;AN=56;BaseQRankSum=17.464;DP=1107;FS=2.621;HRun=0;HaplotypeScore=198.2821;InbreedingCoeff=0.9028;MQ=63.53;MQ0=3;MQRankSum=-6.159;QD=26.87;ReadPosRankSum=3.091;VQSLOD=5.8281;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,106,1771	0/0:18,0:18:51.17:0,51,860	0/0:46,0:26:54.14:0,54,792	0/0:67,0:42:10.13:0,10,709	1/1:5,36:39:81.23:1055,81,0	1/1:2,26:28:57.18:744,57,0	1/1:3,18:21:40.02:545,40,0	0/0:55,1:56:99:0,111,2332	1/1:4,28:32:63.20:818,63,0	0/0:58,0:58:99:0,148,2519	0/0:34,0:34:84.27:0,84,1402	0/0:35,0:35:90.31:0,90,1530	0/0:41,0:41:99:0,108,1840	1/1:7,38:45:96.30:1233,96,0	0/0:43,0:43:99:0,99,1690	0/0:43,0:43:99:0,120,2017	1/1:5,18:23:9.48:511,9,0	0/1:3,16:19:8.60:573,0,9	0/0:26,0:26:60.17:0,60,940	0/0:46,0:46:99:0,126,2093	0/0:77,0:77:99:0,196,3238	0/0:58,0:58:99:0,144,2460	0/0:34,0:34:87.27:0,87,1424	0/0:47,0:47:99:0,117,2045	1/1:4,21:25:63.17:809,63,0	0/0:53,0:51:99:0,138,2310	0/0:29,0:29:75.26:0,75,1277	0/0:16,0:16:24.08:0,24,411
chr10	53543869	.	CTG	C	4598.66	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=16.166;DP=1036;FS=1.679;HRun=0;HaplotypeScore=241.2299;InbreedingCoeff=0.9755;MQ=62.60;MQ0=1;MQRankSum=-14.207;QD=19.74;ReadPosRankSum=-1.858;VQSLOD=4.5737;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:98.99:0,99,1877	0/0:19,0:19:57.18:0,57,1067	0/0:43,0:41:99:0,111,2150	0/0:45,0:41:88.19:0,88,1919	1/1:0,37:32:7.20:136,7,0	1/1:3,33:36:47.33:728,47,0	1/1:4,22:26:33.90:564,34,0	0/0:55,0:55:99:0,166,3019	1/1:2,34:36:73.68:1071,74,0	0/0:64,0:64:99:0,193,3521	0/0:26,0:26:72.23:0,72,1356	0/0:33,0:33:96.32:0,96,1822	0/0:48,0:48:99:0,141,2627	1/1:2,47:49:80.82:1233,81,0	0/0:45,0:45:99:0,129,2444	0/0:49,0:49:99:0,147,2719	1/1:2,6:8:13.20:187,13,0	1/1:5,7:12:11.44:307,11,0	0/0:18,0:18:54.19:0,54,1024	0/0:41,0:41:99:0,120,2307	0/0:69,0:69:99:0,190,3532	0/0:42,0:42:99:0,123,2299	0/0:33,0:33:96.33:0,96,1840	0/0:36,0:36:90.06:0,90,1659	1/1:2,27:21:26.40:373,26,0	0/0:57,0:57:99:0,168,3152	0/0:31,0:31:93.32:0,93,1766	0/0:11,0:11:27.09:0,27,503
chr10	53543887	.	G	GTGTGTCTAT	12101.89	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=9.480;DP=1091;FS=40.186;HRun=0;HaplotypeScore=358.7299;InbreedingCoeff=0.9982;MQ=61.43;MQ0=0;MQRankSum=-17.187;QD=45.67;ReadPosRankSum=-11.375;VQSLOD=1.8726;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:74.73:0,75,2050	0/0:19,0:19:45.15:0,45,1283	0/0:48,0:44:99:0,100,2188	0/0:47,0:39:96.26:0,96,2479	1/1:14,25:41:51.54:1916,52,0	1/1:13,20:36:41.49:1519,41,0	1/1:13,11:29:26.76:422,27,0	0/0:52,0:52:99:0,117,2784	1/1:15,27:48:77.92:2903,78,0	0/0:63,0:63:99:0,181,5017	0/0:25,0:25:69.24:0,69,1961	0/0:35,0:35:99:0,99,2734	0/0:45,0:45:99:0,117,3344	1/1:19,28:53:89.55:2767,90,0	0/0:41,0:41:99:0,111,3227	0/0:52,0:52:99:0,138,3731	1/1:5,4:9:20.19:407,20,0	1/1:9,5:14:20.63:948,21,0	0/0:28,0:28:78.21:0,78,1898	0/0:40,0:40:99:0,102,2885	0/0:68,0:68:99:0,168,4496	0/0:48,0:47:99:0,132,3449	0/0:33,0:33:90.29:0,90,2471	0/0:37,0:37:79.51:0,80,2263	1/1:13,17:21:50.61:1220,51,0	0/0:57,0:57:99:0,157,4200	0/0:38,0:38:96.33:0,96,2678	0/0:12,0:12:36.12:0,36,1055
chr10	53544176	.	A	ATG	19893.87	PASS	AB=0.621;AC=33;AF=0.589;AN=56;BaseQRankSum=-1.710;DP=1127;FS=6.479;HRun=0;HaplotypeScore=186.2404;InbreedingCoeff=0.9256;MQ=53.39;MQ0=34;MQRankSum=3.010;QD=28.30;ReadPosRankSum=3.628;VQSLOD=5.8986;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,1:48:37.68:0,38,785	0/0:10,0:10:30.07:0,30,372	0/0:70,0:15:29.89:0,30,306	0/0:76,0:34:76.04:0,76,827	1/1:11,35:46:46.79:712,47,0	1/1:1,29:30:54.18:903,54,0	1/1:10,25:35:44.14:724,44,0	0/1:28,44:62:39.59:1753,0,40	1/1:6,41:47:90.30:1514,90,0	1/1:13,57:67:99:2643,168,0	1/1:3,22:25:42.14:699,42,0	0/0:41,0:40:99:0,107,1334	0/0:36,0:36:99:0,99,1253	1/1:8,33:41:69.24:1173,69,0	0/0:27,0:27:66.17:0,66,803	0/0:31,0:31:78.24:0,78,997	1/1:16,16:31:72.19:1099,72,0	1/1:18,15:31:62.80:944,63,0	1/1:17,19:28:60.11:886,60,0	1/1:7,33:40:81.21:1303,81,0	1/1:18,58:76:99:1780,105,0	0/0:22,0:22:57.17:0,57,726	0/0:22,0:21:51.14:0,51,645	0/0:41,0:40:96.22:0,96,1232	1/1:5,25:30:35.99:611,36,0	1/1:8,36:42:99:1770,111,0	1/1:3,25:27:60.20:1019,60,0	1/1:1,14:15:22.63:361,23,0
chr10	53544891	.	CT	C	1627.88	PASS	AB=0.892;AC=18;AF=0.321;AN=56;BaseQRankSum=0.353;DP=519;FS=7.254;HRun=12;HaplotypeScore=89.7458;InbreedingCoeff=0.7436;MQ=70.45;MQ0=0;MQRankSum=2.506;QD=10.78;ReadPosRankSum=4.538;VQSLOD=3.1237;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,2:39:50.53:0,51,666	0/0:5,0:6:8.17:0,8,108	0/1:10,1:9:8.23:8,0,99	0/0:17,0:15:12.02:0,12,122	0/0:13,0:23:32.79:0,33,182	0/0:13,0:22:34.64:0,35,192	0/0:14,0:29:49.81:0,50,256	0/0:29,0:31:53.06:0,53,542	0/0:5,0:15:34.37:0,34,180	1/1:4,14:19:7.43:231,7,0	1/1:3,12:17:33.94:244,34,0	0/0:10,0:11:26.08:0,26,288	0/0:21,0:21:39.42:0,39,359	0/0:6,0:12:25.95:0,26,148	0/0:22,1:23:27.81:0,28,448	0/0:12,0:12:6.85:0,7,251	0/0:7,0:29:48.58:0,49,265	0/0:11,0:20:37.41:0,37,207	1/1:5,10:16:30.94:221,31,0	1/1:3,13:17:34.88:261,35,0	1/1:5,14:20:40.88:308,41,0	0/1:11,2:13:16.49:16,0,192	0/0:14,1:16:13.52:0,14,286	0/0:20,1:22:5.21:0,5,368	0/0:4,0:16:17.36:0,17,95	1/1:4,9:13:1.28:160,1,0	1/1:2,12:15:34.90:259,35,0	1/1:4,5:9:14.93:116,15,0
chr10	53546248	.	C	CTGTTGTTGTTGT	4593.42	PASS	AB=1.000;AC=29;AF=0.580;AN=50;BaseQRankSum=2.676;DP=783;FS=12.775;HRun=0;HaplotypeScore=247.1241;InbreedingCoeff=0.7676;MQ=62.44;MQ0=20;MQRankSum=-3.173;QD=10.73;ReadPosRankSum=-4.169;VQSLOD=1.7526;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:54.05:0,54,1245	0/0:12,0:12:15.04:0,15,331	./.	./.	1/1:31,0:30:18.04:243,18,0	1/1:33,0:33:38.23:575,38,0	1/1:47,0:44:14.04:623,14,0	./.	1/1:15,0:27:5.91:132,6,0	1/1:38,0:38:17.54:423,18,0	1/1:17,0:16:6.01:79,6,0	0/0:29,0:29:41.77:0,42,1010	0/0:24,0:24:24.11:0,24,600	1/1:15,0:27:11.84:385,12,0	0/0:24,0:24:21.07:0,21,714	0/0:26,0:27:36.06:0,36,750	0/0:24,0:32:5.99:0,6,158	0/0:15,0:15:2.69:0,3,8	1/1:23,0:19:3.01:57,3,0	1/1:24,2:27:8.99:362,9,0	1/1:54,0:53:37.90:614,38,0	0/0:32,0:32:9.74:0,10,515	0/1:18,0:17:8.22:8,0,336	0/0:47,0:47:69.08:0,69,1837	1/1:19,0:19:15.02:154,15,0	1/1:25,0:25:27.02:429,27,0	1/1:16,9:26:9.03:444,9,0	1/1:12,0:12:6.01:66,6,0
chr10	53547332	.	A	AAGCAATGCTGGA	20305	PASS	AB=0.778;AC=55;AF=0.982;AN=56;BaseQRankSum=3.179;DP=295;FS=16.471;HRun=0;HaplotypeScore=301.2308;InbreedingCoeff=0.1904;MQ=62.04;MQ0=0;MQRankSum=-3.658;QD=68.83;ReadPosRankSum=2.336;VQSLOD=3.3309;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,0:7:14.88:454,15,0	1/1:9,0:9:26.98:654,27,0	1/1:4,1:6:7.70:566,8,0	0/1:5,0:6:99:255,0,147	1/1:12,0:12:24.08:544,24,0	1/1:16,0:16:42.14:1043,42,0	1/1:9,0:9:27.09:759,27,0	1/1:8,0:8:14.92:504,15,0	1/1:12,0:12:27.09:643,27,0	1/1:13,0:13:27.56:810,28,0	1/1:11,0:11:30.10:753,30,0	1/1:6,0:6:18.06:377,18,0	1/1:11,0:11:30.10:838,30,0	1/1:7,0:6:15.05:358,15,0	1/1:19,0:18:54.19:1505,54,0	1/1:10,0:10:27.08:648,27,0	1/1:7,0:7:18.06:591,18,0	1/1:4,0:4:12.04:409,12,0	1/1:7,0:7:18.06:624,18,0	1/1:23,0:23:66.23:1855,66,0	1/1:1,0:1:3.01:77,3,0	1/1:14,0:14:42.14:983,42,0	1/1:13,0:13:39.13:895,39,0	1/1:5,0:5:0.47:1,0,0	1/1:8,0:8:21.07:661,21,0	1/1:20,0:20:51.18:1612,51,0	1/1:17,0:17:45.02:1154,45,0	1/1:11,0:11:30.07:731,30,0
chr10	53547525	.	GGAGAGAGAGAGAGA	G	1061.20	PASS	AC=8;AF=0.154;AN=52;BaseQRankSum=3.553;DP=311;FS=48.319;HRun=0;HaplotypeScore=120.7304;InbreedingCoeff=0.5734;MQ=69.13;MQ0=9;MQRankSum=-4.572;QD=22.11;ReadPosRankSum=1.233;VQSLOD=0.4307;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:12.04:0,12,637	0/0:8,0:8:12.51:0,13,682	0/0:22,0:12:0.89:0,1,2	0/0:28,0:18:0:0,0,0	0/0:10,0:10:9.03:0,9,265	0/0:11,0:11:10.59:0,11,583	0/0:7,0:7:8.99:0,9,246	0/0:18,0:18:6.02:0,6,221	0/0:8,0:11:15.05:0,15,543	1/1:9,0:9:3:27,3,0	1/1:6,4:11:12.04:417,12,0	0/0:11,0:11:12.04:0,12,688	0/0:9,0:9:9.03:0,9,536	0/0:6,0:6:9.03:0,9,361	0/0:7,0:7:6.02:0,6,388	0/0:7,0:7:12.04:0,12,651	0/0:9,0:9:12.04:0,12,472	0/0:6,0:7:12.93:0,13,412	0/0:13,0:13:2.50:0,2,9	1/1:10,7:18:18.06:594,18,0	./.	0/0:7,0:7:3.01:0,3,178	0/0:11,0:11:9.03:0,9,485	0/0:5,0:4:2.67:0,3,178	0/0:9,0:11:18.06:0,18,825	1/1:6,4:10:5.78:154,6,0	./.	0/0:9,0:9:1.82:0,2,5
chr10	53547800	.	CAAAAA	C	1775.66	PASS	AB=0.633;AC=13;AF=0.232;AN=56;BaseQRankSum=2.044;DP=441;FS=5.402;HRun=17;HaplotypeScore=116.2063;InbreedingCoeff=0.8397;MQ=74.29;MQ0=4;MQRankSum=-8.212;QD=19.51;ReadPosRankSum=6.605;VQSLOD=0.6575;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:36:85.17:0,85,1972	0/0:5,0:7:12.04:0,12,240	0/0:36,0:21:16.21:0,16,277	0/0:19,0:9:15.01:0,15,166	0/1:8,10:19:6.66:129,0,7	1/1:2,11:14:32.52:460,33,0	1/1:4,11:16:29.87:434,30,0	0/0:16,0:28:54.16:0,54,966	1/1:4,7:11:17.88:271,18,0	0/0:19,0:19:32.56:0,33,542	0/0:16,0:16:22.89:0,23,359	0/0:8,0:8:18.06:0,18,404	0/0:9,0:9:27.09:0,27,620	1/1:6,8:14:20.76:315,21,0	0/0:20,0:22:51.17:0,51,1158	0/0:8,0:10:30.10:0,30,688	1/1:4,0:8:7.11:68,7,0	0/0:2,0:2:0:0,0,0	0/0:12,0:13:30.07:0,30,534	0/0:25,0:25:54.18:0,54,937	0/0:10,0:9:9.49:0,9,134	0/0:12,0:14:36.08:0,36,829	0/0:8,0:14:27.09:0,27,509	0/0:10,0:13:27.02:0,27,551	1/1:2,6:9:20.48:280,20,0	0/0:15,0:15:39.09:0,39,632	0/0:25,0:25:69.07:0,69,976	0/0:7,0:7:9.01:0,9,123
chr10	53547816	.	AAC	A	1555.89	PASS	AB=0.552;AC=15;AF=0.268;AN=56;BaseQRankSum=0.811;DP=448;FS=11.429;HRun=0;HaplotypeScore=81.5914;InbreedingCoeff=0.7894;MQ=64.62;MQ0=4;MQRankSum=0.319;QD=12.65;ReadPosRankSum=0.211;VQSLOD=2.6719;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:44.80:0,45,846	0/0:7,0:7:18:0,18,193	0/0:34,0:18:4.57:0,5,226	0/0:17,0:6:11.61:0,12,111	0/0:15,0:15:21.81:0,22,133	0/0:19,0:19:42.57:0,43,239	0/0:19,0:19:33.04:0,33,208	0/0:24,0:24:27.67:0,28,421	0/0:14,0:14:31.41:0,31,198	1/1:10,1:11:0.18:121,0,0	0/1:3,13:16:0.20:176,0,0	0/0:8,0:8:5.99:0,6,176	0/0:9,0:9:26.80:0,27,260	0/0:11,0:11:16.90:0,17,73	0/0:21,0:21:56.18:0,56,576	0/0:19,0:19:42.49:0,42,469	0/0:9,0:9:18.66:0,19,114	0/0:7,0:7:12.32:0,12,82	1/1:12,3:15:8.75:256,9,0	1/1:3,20:23:38:348,38,0	1/1:1,8:8:2.76:13,3,0	0/0:13,0:13:32.98:0,33,360	0/0:14,0:14:26.54:0,27,268	0/0:17,0:17:36.26:0,36,358	0/0:12,0:12:27.65:0,28,159	1/1:11,3:14:23.23:248,23,0	1/1:20,7:26:38.76:509,39,0	1/1:2,6:8:6:60,6,0
chr10	53548934	.	CT	C	323.83	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=0.198;DP=442;FS=4.661;HRun=11;HaplotypeScore=82.5060;InbreedingCoeff=0.7783;MQ=65.30;MQ0=3;MQRankSum=2.984;QD=11.99;ReadPosRankSum=-2.998;VQSLOD=2.9043;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:63.08:0,63,645	0/0:9,0:9:18.05:0,18,192	0/0:28,1:16:20.15:0,20,193	0/0:21,0:14:4.28:0,4,73	0/0:22,1:22:39.10:0,39,411	0/0:15,0:15:39.10:0,39,416	0/0:9,0:9:21.05:0,21,224	1/1:9,18:27:50.90:419,51,0	0/0:13,0:13:33.07:0,33,341	0/0:14,0:14:27.07:0,27,287	0/0:20,0:19:60.15:0,60,637	0/0:5,0:5:15.04:0,15,160	0/0:14,0:13:33.07:0,33,344	0/0:8,0:8:18.05:0,18,192	0/0:10,0:10:21.04:0,21,216	0/0:9,0:9:21.05:0,21,224	0/0:18,0:18:42.07:0,42,435	0/0:8,0:8:12.03:0,12,128	0/0:15,0:15:30.07:0,30,315	0/0:21,0:22:53.93:0,54,545	0/0:6,0:6:15.03:0,15,151	0/0:14,0:14:42.11:0,42,447	0/0:18,0:19:41.94:0,42,430	0/0:10,0:10:24.06:0,24,255	0/0:26,0:26:57.14:0,57,604	0/0:21,0:21:57.14:0,57,607	0/0:23,1:24:35.50:0,36,581	0/0:7,0:7:11.03:0,11,119
chr10	53548981	.	C	CAAATGTTCAAATGAA	23318.20	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=-5.142;DP=340;FS=5.112;HRun=0;HaplotypeScore=116.4761;InbreedingCoeff=0.9081;MQ=64.03;MQ0=1;MQRankSum=-12.510;QD=147.58;ReadPosRankSum=5.756;VQSLOD=5.0283;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:78.27:0,78,3465	0/0:5,0:5:15.05:0,15,633	0/0:24,0:17:39.23:0,39,1538	0/0:17,0:11:24.42:0,24,530	1/1:0,16:17:36.12:2738,36,0	1/1:0,11:11:15.05:1145,15,0	1/1:0,4:5:3.01:229,3,0	0/0:22,0:22:60.21:0,60,2528	1/1:0,12:12:24.08:1832,24,0	1/1:1,9:11:33.09:2268,33,0	1/1:0,14:14:24.08:1830,24,0	0/0:7,0:7:21.07:0,21,971	0/0:12,0:12:36.12:0,36,1605	1/1:1,7:9:18.06:1207,18,0	0/0:11,0:11:33.10:0,33,1328	0/0:10,0:10:30.10:0,30,1342	1/1:0,10:10:15.05:1126,15,0	1/1:0,2:4:3.01:230,3,0	1/1:0,2:3:9:481,9,0	1/1:0,6:6:18.06:1374,18,0	1/1:1,1:2:3.01:229,3,0	0/0:20,0:20:57.20:0,57,2441	0/0:21,0:21:63.22:0,63,2680	0/0:7,0:7:21.07:0,21,841	1/1:0,15:17:39.13:2978,39,0	1/1:0,10:11:27.07:1756,27,0	1/1:0,11:12:21.07:1602,21,0	1/1:0,11:14:30.10:2293,30,0
chr10	53549696	.	AT	A	3640	PASS	AB=0.947;AC=34;AF=0.607;AN=56;BaseQRankSum=11.643;DP=525;FS=4.492;HRun=9;HaplotypeScore=67.7014;InbreedingCoeff=0.8291;MQ=69.89;MQ0=7;MQRankSum=3.559;QD=10.87;ReadPosRankSum=4.236;VQSLOD=2.6553;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:35:90.21:0,90,1010	0/0:8,0:8:21.04:0,21,230	0/0:17,0:13:11.86:0,12,106	0/1:18,0:13:19.79:20,0,186	1/1:4,21:24:57.02:521,57,0	1/1:1,19:20:39.02:357,39,0	1/1:2,14:16:30.01:274,30,0	0/0:31,0:29:75.14:0,75,834	1/1:0,17:17:48.03:439,48,0	1/1:3,0:20:35.27:107,35,0	1/1:1,0:16:30.55:90,31,0	0/0:12,0:12:27.01:0,27,295	0/0:16,0:17:47.97:0,48,532	1/1:1,12:13:27.01:247,27,0	0/0:20,0:20:51.11:0,51,559	0/0:13,0:13:36.08:0,36,403	1/1:3,25:28:61.17:541,61,0	1/1:4,15:18:39.02:357,39,0	1/1:1,0:21:36.66:108,37,0	1/1:2,0:28:46.85:138,47,0	1/1:3,0:14:20.37:60,20,0	0/0:16,0:16:36.11:0,36,411	0/0:20,0:20:51.10:0,51,564	0/1:15,2:17:42.83:43,0,222	1/1:1,7:8:18.01:165,18,0	1/1:3,0:16:26.48:78,26,0	1/1:4,0:20:26.48:78,26,0	1/1:5,0:9:6.11:18,6,0
chr10	53550256	.	A	ATTGTT	10931.41	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=-11.723;DP=693;FS=0.000;HRun=0;HaplotypeScore=115.6172;InbreedingCoeff=0.9125;MQ=71.96;MQ0=2;MQRankSum=0.858;QD=32.25;ReadPosRankSum=-1.670;VQSLOD=4.3380;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:38.11:0,38,914	0/0:11,0:11:27.09:0,27,485	0/0:37,0:30:5.33:0,5,192	0/0:32,0:23:11.59:0,12,137	0/0:33,0:33:51.16:0,51,892	0/0:26,0:26:48.13:0,48,797	0/1:14,0:14:6.50:7,0,304	1/1:41,0:34:20.94:312,21,0	0/0:19,0:19:39.13:0,39,678	1/1:14,15:32:57.13:1362,57,0	1/1:12,16:31:53.12:1080,53,0	0/0:11,0:12:30.10:0,30,525	0/0:11,0:11:24.08:0,24,428	0/0:23,0:23:30.08:0,30,496	0/0:15,0:15:33.11:0,33,599	0/0:15,0:15:33.09:0,33,553	1/1:10,19:31:30.10:760,30,0	1/1:5,6:11:12.04:338,12,0	1/1:13,11:23:33.08:847,33,0	1/1:10,18:29:54.14:1295,54,0	1/1:19,15:35:36.12:1014,36,0	0/0:20,0:20:48.15:0,48,827	0/0:28,0:28:57.17:0,57,989	0/0:16,0:16:33.11:0,33,599	0/0:23,0:23:39.13:0,39,699	1/1:10,18:32:66.19:1551,66,0	1/1:11,19:36:48.16:1352,48,0	1/1:6,16:22:36.12:1014,36,0
chr10	53550997	.	GAA	G	1965.15	PASS	AB=0.949;AC=27;AF=0.482;AN=56;BaseQRankSum=-1.845;DP=406;FS=10.376;HRun=3;HaplotypeScore=76.1539;InbreedingCoeff=0.2443;MQ=55.41;MQ0=9;MQRankSum=3.731;QD=7.22;ReadPosRankSum=-0.069;VQSLOD=-0.7163;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:31,0:31:16.43:16,0,478	0/0:4,0:4:9.88:0,10,79	0/1:13,0:9:27.11:54,0,27	0/1:18,0:9:28.80:29,0,60	1/1:13,0:13:29.74:245,30,0	1/1:11,0:11:29.88:232,30,0	1/1:12,0:12:32.96:276,33,0	0/0:30,0:28:77.36:0,77,558	1/1:9,0:9:26.86:206,27,0	0/1:14,7:20:56.47:56,0,298	0/0:18,0:18:6.59:0,7,308	0/1:13,0:13:1.17:1,0,136	0/1:13,0:12:17.92:18,0,105	1/1:16,0:15:38.74:322,39,0	0/0:16,0:16:8.56:0,9,207	0/0:14,0:14:35.70:0,36,282	1/1:16,0:16:12.05:207,12,0	1/1:9,1:10:17.02:146,17,0	0/1:7,6:13:73.10:73,0,120	0/0:16,6:20:22.72:0,23,309	0/1:8,0:8:4.91:5,0,87	0/1:8,0:8:14.97:15,0,91	0/0:7,0:6:9.89:0,10,81	0/1:13,0:13:0.49:0,0,216	1/1:12,0:12:25.89:243,26,0	0/0:12,0:12:26.25:0,26,287	0/1:22,0:21:6.61:7,0,378	0/0:11,0:10:2.46:0,2,142
chr10	53550999	.	A	AAG	258.27	PASS	AB=0.987;AC=27;AF=0.614;AN=44;BaseQRankSum=-0.012;DP=415;FS=4.781;HRun=0;HaplotypeScore=88.5344;InbreedingCoeff=0.3992;MQ=54.63;MQ0=9;MQRankSum=-1.467;QD=1.10;ReadPosRankSum=-0.082;VQSLOD=1.1881;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:17.57:0,18,140	0/1:4,0:4:0:0,0,0	./.	./.	./.	1/1:11,0:11:1.02:3,1,0	1/1:11,0:11:3.45:26,3,0	./.	0/0:8,0:8:2.80:0,3,13	1/1:21,0:20:2.49:6,2,0	1/1:17,1:18:5.85:54,6,0	1/1:11,3:14:0.47:1,0,0	0/0:13,0:13:7.84:0,8,34	./.	1/1:15,0:16:11.99:118,12,0	0/1:13,0:14:24.21:59,0,24	0/1:15,0:15:0:0,0,0	1/1:11,0:10:3.68:15,4,0	0/1:13,0:13:0:0,0,0	0/1:25,0:23:0:0,0,0	./.	0/0:8,0:8:3:0,3,26	0/0:7,0:6:0.47:0,0,1	0/0:13,0:13:14.25:0,14,136	1/1:13,0:13:3:25,3,0	1/1:12,0:12:2.99:23,3,0	1/1:23,0:22:5.99:45,6,0	1/1:14,0:13:1.89:3,2,0
chr10	53551351	.	TA	T	1512.48	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.116;DP=685;FS=2.881;HRun=1;HaplotypeScore=65.4333;InbreedingCoeff=0.9989;MQ=80.35;MQ0=0;MQRankSum=-3.142;QD=36.01;ReadPosRankSum=2.552;VQSLOD=4.1106;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,117,1805	0/0:8,0:8:24.08:0,24,375	0/0:17,1:17:44.47:0,44,601	0/0:20,0:19:50.54:0,51,789	0/0:43,0:43:99:0,123,1884	0/0:25,0:25:75.26:0,75,1173	0/0:23,0:23:69.23:0,69,1077	0/0:26,0:26:78.21:0,78,1097	0/0:25,0:25:72.21:0,72,1078	0/0:27,0:27:78.24:0,78,1162	0/0:19,0:19:57.16:0,57,823	0/0:14,0:14:42.13:0,42,632	0/0:14,0:14:39.13:0,39,607	0/0:19,0:19:57.18:0,57,869	0/0:23,0:23:69.19:0,69,1012	0/0:21,0:21:63.13:0,63,913	1/1:0,20:20:51.17:712,51,0	1/1:0,22:22:66.22:922,66,0	0/0:24,0:24:72.23:0,72,1083	0/0:40,0:40:99:0,120,1782	0/0:18,0:18:54.18:0,54,842	0/0:22,0:22:66.21:0,66,1010	0/0:22,0:22:60.19:0,60,915	0/0:28,0:28:84.29:0,84,1314	0/0:20,0:20:60.20:0,60,937	0/0:38,0:38:99:0,108,1650	0/0:39,0:39:99:0,117,1768	0/0:26,0:26:66.21:0,66,1001
chr10	53552547	.	TA	T	7151.44	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=12.814;DP=578;FS=0.000;HRun=3;HaplotypeScore=56.8259;InbreedingCoeff=0.9973;MQ=83.06;MQ0=0;MQRankSum=-5.044;QD=35.06;ReadPosRankSum=-0.651;VQSLOD=4.9232;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,105,1509	0/0:5,0:5:15.05:0,15,216	0/0:26,0:26:75.25:0,75,1077	0/0:23,0:23:69.23:0,69,990	0/0:25,0:25:72.23:0,72,1018	0/0:19,0:19:57.18:0,57,802	0/0:26,0:26:78.25:0,78,1104	1/1:1,23:24:69.19:829,69,0	0/0:23,0:23:69.21:0,69,973	1/1:1,26:27:78.24:967,78,0	1/1:1,17:18:51.15:620,51,0	0/0:18,0:18:51.15:0,51,714	0/0:20,0:20:60.20:0,60,863	0/0:17,0:17:51.16:0,51,715	0/0:17,0:17:51.16:0,51,716	0/0:17,0:17:48.16:0,48,691	0/0:25,0:25:72.19:0,72,993	0/0:15,0:15:42.14:0,42,605	1/1:2,21:23:63.19:771,63,0	1/1:0,21:21:60.19:744,60,0	1/1:1,14:15:42.13:521,42,0	0/0:18,0:18:51.13:0,51,666	0/0:18,0:18:54.15:0,54,726	0/0:18,0:18:54.18:0,54,776	0/0:9,0:9:27.08:0,27,373	1/1:1,32:33:96.28:1175,96,0	1/1:0,28:28:84.26:1041,84,0	1/1:0,15:15:39.12:483,39,0
chr10	53552713	.	GC	G	1077.49	PASS	AB=0.893;AC=33;AF=0.589;AN=56;BaseQRankSum=2.058;DP=300;FS=29.122;HRun=11;HaplotypeScore=43.5055;InbreedingCoeff=0.2904;MQ=71.24;MQ0=1;MQRankSum=1.993;QD=4.36;ReadPosRankSum=4.384;VQSLOD=-0.1620;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:8,1:10:20.66:21,0,27	0/0:3,0:3:8.39:0,8,71	0/1:15,0:14:18.71:19,0,113	0/0:9,0:9:4.67:0,5,49	0/0:6,0:6:0:0,0,0	1/1:8,0:8:0.45:1,0,0	0/1:20,0:20:12.24:12,0,29	0/1:9,0:16:15.60:16,0,24	0/0:18,0:18:2.32:0,2,106	1/1:4,3:9:3.55:48,4,0	1/1:9,0:9:5.97:49,6,0	0/1:5,0:6:0.90:1,0,27	0/1:9,1:11:11.51:12,0,90	0/1:12,0:12:2.03:2,0,39	0/0:6,0:6:9.49:0,9,97	0/0:7,0:7:15.90:0,16,144	1/1:8,17:29:45.72:316,46,0	1/1:3,1:7:6.80:36,7,0	1/1:3,6:9:19.58:133,20,0	1/1:2,6:8:8.98:74,9,0	1/1:8,10:18:28.67:227,29,0	0/0:4,0:4:5.38:0,5,40	0/1:5,0:5:0:0,0,0	1/1:3,1:4:8.16:50,8,0	1/1:9,0:9:2.77:8,3,0	0/1:11,1:13:0:0,0,0	1/1:4,9:15:19.03:135,19,0	1/1:7,5:13:10.98:80,11,0
chr10	53552721	.	CCCCA	C	760.73	PASS	AC=10;AF=0.185;AN=54;BaseQRankSum=0.900;DP=295;FS=4.694;HRun=0;HaplotypeScore=63.2278;InbreedingCoeff=0.8122;MQ=80.65;MQ0=1;MQRankSum=-2.839;QD=10.42;ReadPosRankSum=-0.954;VQSLOD=1.9753;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:13.78:0,14,157	0/0:4,0:4:12:0,12,169	0/0:17,0:15:24.96:0,25,359	0/0:12,0:12:24.60:0,25,229	./.	1/1:8,1:9:11.41:96,11,0	1/1:18,4:22:30.92:290,31,0	0/0:12,0:12:24.20:0,24,180	1/1:16,3:19:21.73:201,22,0	0/0:7,0:7:11.81:0,12,91	0/0:7,0:7:9.01:0,9,88	0/0:5,0:5:5.97:0,6,92	0/0:10,0:10:26.76:0,27,361	1/1:12,2:14:21.79:246,22,0	0/0:6,0:6:14.98:0,15,287	0/0:7,0:7:15.05:0,15,279	0/0:26,0:26:57.32:0,57,590	0/0:6,0:6:9.39:0,9,75	0/0:13,0:13:32.76:0,33,291	0/0:9,0:9:16.90:0,17,155	0/0:20,0:20:39.48:0,39,427	0/0:7,0:7:11.99:0,12,145	0/0:5,0:5:2.99:0,3,23	0/0:6,0:6:17.88:0,18,172	1/1:8,1:9:8.89:92,9,0	0/0:7,0:7:3:0,3,26	0/0:13,0:13:20.96:0,21,224	0/0:11,0:11:11.98:0,12,131
chr10	53552722	.	CCCA	C	999.34	PASS	AB=1.000;AC=11;AF=0.204;AN=54;BaseQRankSum=0.696;DP=294;FS=2.208;HRun=0;HaplotypeScore=57.4914;InbreedingCoeff=0.7157;MQ=82.12;MQ0=1;MQRankSum=-2.432;QD=12.34;ReadPosRankSum=-1.801;VQSLOD=3.0239;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:8,0:8:4.33:4,0,103	0/0:4,0:4:12:0,12,144	0/0:18,0:16:5.44:0,5,293	0/0:13,0:13:7.70:0,8,188	./.	1/1:9,1:10:17.92:145,18,0	1/1:17,5:22:31.70:375,32,0	0/0:12,0:12:23.31:0,23,112	1/1:16,2:18:29.97:309,30,0	0/0:8,0:8:10.84:0,11,74	0/0:7,0:7:8.87:0,9,61	0/0:6,0:6:8.23:0,8,93	0/0:10,0:10:23.17:0,23,266	1/1:13,1:14:24.02:233,24,0	0/0:6,0:6:11.99:0,12,221	0/0:6,0:6:15.02:0,15,216	0/0:26,0:26:52.17:0,52,377	0/0:6,0:6:7.71:0,8,40	0/0:13,0:13:28.35:0,28,204	0/0:9,0:9:16.86:0,17,119	0/0:21,0:21:41.64:0,42,332	0/0:7,0:7:11.02:0,11,116	0/0:5,0:5:2.98:0,3,23	0/0:6,0:6:15.42:0,15,131	1/1:9,0:9:9.01:99,9,0	0/0:7,0:7:2.98:0,3,26	0/0:12,0:12:19.56:0,20,140	0/0:9,0:9:11.34:0,11,83
chr10	53552724	.	CA	C	979.73	PASS	AB=0.931;AC=24;AF=0.444;AN=54;BaseQRankSum=3.084;DP=291;FS=0.000;HRun=1;HaplotypeScore=48.2369;InbreedingCoeff=-0.0430;MQ=83.74;MQ0=1;MQRankSum=-3.244;QD=4.64;ReadPosRankSum=2.362;VQSLOD=0.4900;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:11,0:11:9.31:9,0,121	0/1:4,0:4:7.60:8,0,58	0/1:15,2:16:38.45:38,0,223	0/1:13,1:14:26.88:27,0,130	./.	1/1:11,0:11:20.68:147,21,0	1/1:17,0:17:32.23:201,32,0	0/0:12,1:13:21.79:0,22,152	1/1:18,0:18:35.56:253,36,0	0/0:7,0:7:5.77:0,6,43	0/1:3,4:7:15.77:37,0,16	0/0:6,0:6:8.38:0,8,70	0/1:10,0:10:40.64:41,0,113	1/1:13,0:13:23.55:176,24,0	0/1:6,0:6:6.76:7,0,142	0/0:8,0:8:18.01:0,18,153	0/1:25,2:27:22.46:22,0,83	0/1:4,1:5:4.28:4,0,17	0/1:14,1:15:51.57:52,0,130	0/1:9,0:9:3.01:3,0,30	0/0:20,1:21:5.07:0,5,106	0/1:5,0:5:5.97:6,0,75	0/0:4,0:4:2.99:0,3,23	0/1:5,1:6:51.71:52,0,55	1/1:7,0:7:8.85:60,9,0	0/0:5,1:6:2.97:0,3,26	0/0:13,0:13:4.97:0,5,56	0/1:8,0:8:0.26:0,0,25
chr10	53559465	.	GGGGA	G	300.72	PASS	AC=14;AF=0.368;AN=38;BaseQRankSum=5.078;DP=167;FS=0.000;HRun=0;HaplotypeScore=18.6617;InbreedingCoeff=0.5677;MQ=19.07;MQ0=88;MQRankSum=-0.354;QD=6.27;ReadPosRankSum=0.148;VQSLOD=0.9135;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:3:9.03:0,9,234	0/0:4,0:2:3.01:0,3,78	./.	./.	./.	0/0:4,0:1:3.01:0,3,75	0/0:12,0:8:24.07:0,24,569	1/1:1,5:5:15.05:284,15,0	0/0:5,0:1:3.01:0,3,78	1/1:5,0:3:8.63:44,9,0	1/1:8,0:3:2.98:22,3,0	0/0:3,0:1:3.01:0,3,78	./.	0/0:4,0:2:6.02:0,6,135	0/0:8,0:3:9.03:0,9,214	0/0:9,0:3:6.02:0,6,153	0/0:9,0:6:12.04:0,12,311	./.	1/1:7,0:4:4.74:17,5,0	1/1:4,0:1:2.98:21,3,0	./.	./.	0/0:8,0:4:12.04:0,12,309	0/0:5,0:2:6.02:0,6,144	./.	1/1:8,0:3:5.75:30,6,0	1/1:10,0:2:2.92:17,3,0	./.
chr10	53559466	.	GGGA	G	434.07	PASS	AC=14;AF=0.368;AN=38;BaseQRankSum=5.160;DP=169;FS=0.000;HRun=0;HaplotypeScore=16.7641;InbreedingCoeff=0.5739;MQ=19.09;MQ0=89;MQRankSum=-1.357;QD=8.86;ReadPosRankSum=0.111;VQSLOD=1.6858;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:3:9.03:0,9,195	0/0:5,0:2:3.01:0,3,65	./.	./.	./.	0/0:4,0:1:3.01:0,3,65	0/0:13,0:9:27.06:0,27,513	1/1:6,0:5:15.02:140,15,0	0/0:5,0:1:3.01:0,3,65	1/1:2,3:3:9.03:153,9,0	1/1:6,3:3:3.01:37,3,0	0/0:3,0:1:3.01:0,3,65	./.	0/0:4,0:2:6.02:0,6,128	0/0:8,0:3:9.03:0,9,193	0/0:9,0:3:6.02:0,6,130	0/0:9,0:6:12.04:0,12,260	./.	1/1:4,3:4:5.38:52,5,0	1/1:3,1:1:3.01:37,3,0	./.	./.	0/0:8,0:4:12.04:0,12,259	0/0:5,0:2:6.02:0,6,128	./.	1/1:6,2:3:6.02:102,6,0	1/1:8,2:2:3.01:49,3,0	./.
chr10	53559547	.	T	TA	2312.81	PASS	AB=0.909;AC=19;AF=0.339;AN=56;BaseQRankSum=8.180;DP=284;FS=10.215;HRun=8;HaplotypeScore=36.5523;InbreedingCoeff=0.8048;MQ=51.10;MQ0=39;MQRankSum=-4.850;QD=18.65;ReadPosRankSum=-1.138;VQSLOD=1.8985;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:21:34.53:0,35,496	0/0:5,0:4:12.01:0,12,110	0/0:5,0:3:6:0,6,55	0/0:3,0:3:0.78:0,1,13	0/0:10,0:10:30.02:0,30,274	0/0:12,0:11:27.01:0,27,247	0/0:10,0:10:18:0,18,165	1/1:11,8:17:27.07:303,27,0	0/0:10,0:7:18:0,18,165	1/1:3,6:8:18.05:208,18,0	1/1:3,13:15:36.11:412,36,0	0/0:7,0:7:18.01:0,18,165	0/0:8,0:6:15.01:0,15,137	0/0:9,0:7:14.90:0,15,137	0/0:5,0:4:6:0,6,55	0/0:6,0:4:6:0,6,54	0/0:22,0:21:41.96:0,42,379	0/0:6,0:4:12.01:0,12,110	1/1:3,3:5:12.03:136,12,0	1/1:2,6:6:18.05:208,18,0	1/1:3,7:8:21.06:239,21,0	0/0:6,0:5:15.01:0,15,137	0/0:9,0:6:12:0,12,110	0/1:9,1:8:12.65:13,0,139	0/0:4,0:3:9:0,9,82	1/1:5,10:10:30.09:346,30,0	1/1:5,10:10:24.07:274,24,0	1/1:5,11:13:33.10:381,33,0
chr10	53559559	.	TAA	T	2054.02	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=7.381;DP=276;FS=14.264;HRun=11;HaplotypeScore=43.7245;InbreedingCoeff=0.9276;MQ=57.25;MQ0=22;MQRankSum=-1.127;QD=21.18;ReadPosRankSum=1.048;VQSLOD=0.9485;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:24:60.20:0,60,924	0/0:4,0:4:9.03:0,9,139	0/0:6,0:4:9.03:0,9,128	0/0:4,0:4:11.66:0,12,105	0/0:10,0:10:24.08:0,24,367	0/0:10,0:10:27.09:0,27,415	0/0:8,0:8:18.06:0,18,275	0/0:4,0:13:30.42:0,30,115	0/0:6,0:7:20.52:0,21,260	1/1:2,10:11:30.07:319,30,0	1/1:2,13:15:36.08:383,36,0	0/0:9,0:9:24.08:0,24,354	0/0:8,0:8:18.05:0,18,277	0/0:11,0:10:24.08:0,24,369	0/0:5,0:5:14.97:0,15,176	0/0:4,0:3:6.02:0,6,92	0/0:1,0:17:45.04:0,45,423	0/0:1,0:4:12.02:0,12,115	1/1:2,7:9:15:215,15,0	1/1:3,7:8:15.03:160,15,0	1/1:0,10:10:27.07:287,27,0	0/0:8,0:7:18.06:0,18,277	0/0:8,0:7:18.02:0,18,251	0/0:9,0:8:22.37:0,22,291	0/0:3,0:3:9.03:0,9,139	1/1:4,9:10:27.05:287,27,0	1/1:5,10:10:24.06:255,24,0	1/1:1,11:11:33.08:351,33,0
chr10	53559802	.	CAA	C	1144.52	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=2.593;DP=390;FS=0.000;HRun=14;HaplotypeScore=53.7734;InbreedingCoeff=0.8427;MQ=56.94;MQ0=18;MQRankSum=1.868;QD=10.70;ReadPosRankSum=2.752;VQSLOD=1.7399;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,1:29:66.66:0,67,866	0/0:6,0:5:11.99:0,12,146	0/0:12,0:10:9.17:0,9,158	0/0:6,0:5:4.18:0,4,108	1/1:4,11:16:20.46:225,20,0	1/1:3,13:16:17.76:260,18,0	1/1:5,11:14:29.71:276,30,0	0/0:23,0:26:61.56:0,62,725	1/1:5,5:10:14.67:122,15,0	0/0:9,0:9:20.56:0,21,261	0/0:17,0:17:47.49:0,47,570	0/0:9,0:9:17.91:0,18,185	0/0:11,0:11:27.03:0,27,337	1/1:1,8:9:24.02:219,24,0	0/0:8,0:8:21.07:0,21,294	0/0:12,0:11:20.92:0,21,227	0/1:25,0:18:5.64:6,0,75	0/0:11,0:9:12.30:0,12,108	0/0:11,0:15:37.98:0,38,396	0/0:7,0:8:23.88:0,24,233	0/0:9,0:9:20.54:0,21,245	0/0:2,0:3:6.02:0,6,84	0/0:13,0:12:30.05:0,30,395	0/0:16,0:18:39.92:0,40,485	1/1:4,8:12:23.97:222,24,0	0/0:23,0:21:50.43:0,50,538	0/0:18,0:17:42.08:0,42,541	0/0:11,0:14:38.55:0,39,450
chr10	53559815	.	AAT	A	356.42	PASS	AB=0.968;AC=11;AF=0.196;AN=56;BaseQRankSum=8.626;DP=399;FS=12.386;HRun=0;HaplotypeScore=57.3474;InbreedingCoeff=0.4597;MQ=62.52;MQ0=10;MQRankSum=0.303;QD=3.24;ReadPosRankSum=4.364;VQSLOD=0.3582;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:75.06:0,75,975	0/0:6,0:6:14.92:0,15,179	0/0:18,0:14:38.68:0,39,406	0/0:9,0:8:20.41:0,20,236	0/1:16,0:16:11.36:11,0,110	0/1:18,0:16:27.63:28,0,48	0/1:13,1:13:0.72:65,0,1	0/0:26,0:26:74.81:0,75,909	0/1:9,1:10:18.07:18,0,33	0/0:11,0:11:32.80:0,33,383	0/0:26,0:25:62.72:0,63,742	0/0:7,0:7:11.96:0,12,151	0/0:9,0:9:24.05:0,24,326	0/1:10,0:10:18.92:36,0,19	0/0:8,0:8:24.07:0,24,348	0/0:8,0:8:17.99:0,18,236	1/1:18,2:14:22.55:185,23,0	1/1:14,0:12:7.94:148,8,0	0/0:19,0:19:50.79:0,51,562	0/0:9,0:9:14.91:0,15,193	0/0:8,0:8:23.96:0,24,307	0/0:5,0:5:11.97:0,12,137	0/0:16,0:15:38.99:0,39,493	0/0:18,0:18:38.67:0,39,531	1/1:8,0:8:10.13:23,10,0	0/0:21,0:20:44.71:0,45,549	0/0:16,0:16:38.85:0,39,531	0/0:21,0:21:56.92:0,57,651
chr10	53559816	.	AT	A	438.48	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=3.678;DP=386;FS=0.753;HRun=1;HaplotypeScore=49.0192;InbreedingCoeff=0.8643;MQ=63.64;MQ0=9;MQRankSum=-4.221;QD=13.70;ReadPosRankSum=-0.012;VQSLOD=2.4893;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:72.83:0,73,711	0/0:6,0:6:14.90:0,15,145	0/0:18,0:14:35.76:0,36,336	0/0:9,0:8:20.53:0,21,197	0/0:17,0:17:45.44:0,45,260	0/0:18,0:16:23.81:0,24,152	0/0:14,0:13:16.84:0,17,115	0/0:28,0:28:76.22:0,76,750	0/0:10,0:10:8.18:0,8,92	0/0:11,0:11:29.17:0,29,300	0/0:25,0:24:57.68:0,58,574	0/0:4,0:4:11.98:0,12,115	0/0:8,0:8:23.85:0,24,226	0/0:10,0:10:10.01:0,10,108	0/0:8,0:8:24.06:0,24,270	0/0:6,0:6:18.03:0,18,192	1/1:6,12:13:29.60:328,30,0	1/1:10,4:12:28.05:232,28,0	0/0:17,0:17:44.90:0,45,437	0/0:6,0:6:14.90:0,15,147	0/0:8,0:8:22.58:0,23,229	0/0:5,0:5:11.95:0,12,115	0/0:16,0:15:41.93:0,42,409	0/0:17,1:18:9.94:0,10,347	0/0:8,0:8:22.94:0,23,120	0/0:19,0:18:39.98:0,40,398	0/0:16,0:16:38.58:0,39,412	0/0:21,0:21:55.20:0,55,485
chr10	53560142	.	A	AT	9476.84	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-0.965;DP=557;FS=12.685;HRun=8;HaplotypeScore=65.0656;InbreedingCoeff=0.9618;MQ=76.79;MQ0=0;MQRankSum=-1.295;QD=26.85;ReadPosRankSum=-0.887;VQSLOD=4.3058;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,99,904	0/0:12,0:12:32.98:0,33,291	0/0:17,0:17:41.99:0,42,376	0/0:9,0:9:24.01:0,24,217	1/1:1,22:23:66.11:732,66,0	1/1:3,24:27:69.21:796,69,0	1/1:3,10:14:26.91:291,27,0	1/1:8,1:30:63.08:360,63,0	1/1:3,13:16:39.12:450,39,0	1/1:4,31:35:96.26:1085,96,0	1/1:2,15:17:20.64:477,21,0	0/0:10,0:10:24.01:0,24,220	0/0:19,0:19:51.02:0,51,463	1/1:2,6:8:15.04:173,15,0	0/0:22,0:22:63.03:0,63,577	0/0:19,0:19:51.03:0,51,467	1/1:4,16:20:45.61:520,46,0	1/1:1,3:4:9.03:104,9,0	1/1:6,24:30:72.20:820,72,0	1/1:5,24:29:47.73:788,48,0	1/1:1,22:23:63.19:727,63,0	0/0:15,0:15:35.73:0,36,326	0/0:19,0:19:51.01:0,51,467	0/0:22,0:22:60.03:0,60,549	1/1:2,15:17:42.12:485,42,0	1/1:5,22:27:66.20:762,66,0	1/1:3,19:22:54.16:623,54,0	1/1:1,10:11:2.63:284,3,0
chr10	53560730	.	CTT	C	1827.98	PASS	AB=0.609;AC=18;AF=0.321;AN=56;BaseQRankSum=5.783;DP=505;FS=4.095;HRun=15;HaplotypeScore=67.1883;InbreedingCoeff=0.8246;MQ=72.81;MQ0=0;MQRankSum=-0.538;QD=10.21;ReadPosRankSum=4.699;VQSLOD=2.2603;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:25:62.95:0,63,724	0/0:9,0:9:15.03:0,15,177	0/0:15,0:6:0.19:0,0,15	0/0:15,0:14:16.21:0,16,93	0/0:20,0:22:47.08:0,47,509	0/0:30,0:33:77.59:0,78,897	0/0:14,0:16:34.99:0,35,355	1/1:5,0:18:29.48:123,29,0	0/0:16,0:17:39.61:0,40,439	1/1:7,13:20:32.76:290,33,0	1/1:4,15:22:29.34:293,29,0	0/0:11,0:13:23.46:0,23,269	0/0:19,0:19:47.59:0,48,560	0/0:13,0:13:32.98:0,33,359	0/0:19,0:20:48.68:0,49,538	0/0:11,0:14:33.02:0,33,354	0/0:3,0:15:25.43:0,25,99	0/1:8,2:21:27.02:27,0,43	1/1:6,13:19:38.91:343,39,0	0/1:5,7:15:1.31:107,0,1	1/1:2,8:10:14.95:132,15,0	0/0:16,0:16:41.71:0,42,522	0/0:16,0:19:37.58:0,38,427	0/0:23,0:26:65.15:0,65,779	0/0:16,0:18:44.98:0,45,487	1/1:10,13:23:29.55:260,30,0	1/1:7,19:26:21.60:347,22,0	1/1:1,4:5:13.81:111,14,0
chr10	53561054	.	G	GCA	1577.20	PASS	AB=0.848;AC=27;AF=0.519;AN=52;BaseQRankSum=1.889;DP=639;FS=13.908;HRun=0;HaplotypeScore=108.0288;InbreedingCoeff=0.0935;MQ=52.51;MQ0=18;MQRankSum=0.001;QD=3.30;ReadPosRankSum=-0.571;VQSLOD=1.2686;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:43:47.89:0,48,492	0/0:8,0:8:3.01:0,3,33	./.	./.	1/1:9,11:17:12.04:181,12,0	0/1:12,7:19:21.37:124,0,21	0/1:19,13:32:85.27:184,0,85	1/1:23,0:15:8.17:50,8,0	0/1:7,7:13:14.94:208,0,15	0/1:27,0:25:36.07:51,0,36	0/1:14,0:14:0.36:0,0,0	0/1:25,1:25:15.27:15,0,239	0/0:14,0:16:32.71:0,33,304	1/1:14,1:24:11.95:98,12,0	0/1:20,1:20:24.13:24,0,168	0/0:16,0:17:29.68:0,30,256	0/1:33,11:44:99:139,0,250	0/1:27,6:31:42.05:42,0,178	0/1:23,0:22:16.32:16,0,31	1/1:23,0:23:11.45:49,11,0	1/1:58,0:55:0.68:107,1,0	0/0:18,0:20:9.05:0,9,248	0/0:13,0:15:20.86:0,21,195	0/0:18,0:26:38.11:0,38,345	0/1:9,9:19:18.11:147,0,18	1/1:31,0:30:20.43:182,20,0	1/1:18,0:17:5.03:31,5,0	1/1:7,0:7:11.96:101,12,0
chr10	53561067	.	C	CACACACACAA	3611.50	PASS	AB=0.782;AC=15;AF=0.278;AN=54;BaseQRankSum=-0.766;DP=654;FS=0.853;HRun=0;HaplotypeScore=181.2937;InbreedingCoeff=0.7485;MQ=53.48;MQ0=17;MQRankSum=-4.683;QD=15.24;ReadPosRankSum=-4.488;VQSLOD=1.5442;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:83.80:0,84,1409	0/0:5,0:5:11.94:0,12,158	./.	0/0:14,0:7:20.98:0,21,197	0/0:20,0:17:20.21:0,20,188	0/0:23,0:23:28.05:0,28,366	0/0:31,0:31:41.96:0,42,574	0/1:31,0:23:44.05:44,0,122	0/0:17,0:16:27.82:0,28,263	1/1:27,0:25:47.19:745,47,0	1/1:13,0:13:16.71:118,17,0	0/0:25,0:25:60.02:0,60,996	0/0:21,0:20:48.01:0,48,936	0/0:23,0:22:7.71:0,8,95	0/0:20,0:19:50.35:0,50,627	0/0:17,0:17:42.08:0,42,734	0/0:42,0:41:80.11:0,80,1238	0/0:28,0:26:53.92:0,54,816	1/1:20,0:20:22.27:315,22,0	1/1:5,19:27:23.99:192,24,0	1/1:60,0:58:50.05:812,50,0	0/0:23,0:23:41.34:0,41,961	0/0:16,0:16:30.05:0,30,565	0/0:27,0:27:50.70:0,51,1091	0/0:18,0:18:25.59:0,26,314	1/1:4,24:33:48.30:1057,48,0	0/1:8,9:16:24.65:143,0,25	0/1:5,0:9:0.70:185,0,1
chr10	53564913	.	CA	C	5550.92	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=14.296;DP=622;FS=4.409;HRun=6;HaplotypeScore=59.9071;InbreedingCoeff=0.9996;MQ=83.36;MQ0=0;MQRankSum=-3.274;QD=28.32;ReadPosRankSum=3.381;VQSLOD=5.5693;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:45.15:0,45,591	0/0:14,0:14:36.12:0,36,474	0/0:19,0:19:42.13:0,42,533	0/0:24,0:24:56.56:0,57,648	0/0:34,0:34:93.30:0,93,1223	0/0:29,0:28:84.26:0,84,1086	0/0:21,0:21:54.17:0,54,696	0/0:29,0:29:78.25:0,78,1026	0/0:26,0:26:75.24:0,75,986	1/1:3,35:38:99:1120,105,0	1/1:2,13:15:33.08:355,33,0	0/0:22,0:22:63.20:0,63,827	0/0:26,0:26:75.23:0,75,971	0/0:17,0:17:43:0,43,574	0/0:25,0:25:75.22:0,75,958	0/0:23,0:23:63.20:0,63,829	0/0:17,0:17:48.16:0,48,631	0/0:10,0:10:27.05:0,27,336	1/1:3,11:14:35.96:369,36,0	1/1:2,30:32:81.20:870,81,0	1/1:2,20:22:57.14:612,57,0	0/0:19,0:19:48.16:0,48,632	0/0:25,0:25:69.21:0,69,893	0/0:16,0:16:48.11:0,48,611	0/0:15,0:15:36.12:0,36,474	1/1:2,26:28:78.20:839,78,0	1/1:1,36:37:99:1064,99,0	1/1:0,10:10:30.08:322,30,0
chr10	53565442	.	G	GT	3620.45	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-10.075;DP=613;FS=10.379;HRun=9;HaplotypeScore=64.0328;InbreedingCoeff=0.9948;MQ=83.56;MQ0=2;MQRankSum=0.707;QD=22.91;ReadPosRankSum=-0.880;VQSLOD=3.7483;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:71.96:0,72,621	0/0:8,0:8:20.87:0,21,172	0/0:53,0:40:62.94:0,63,516	0/0:32,1:21:18.34:0,18,176	1/1:1,25:27:71.77:728,72,0	1/1:6,20:26:34.07:589,34,0	1/1:2,27:30:56.99:611,57,0	1/1:8,23:31:67.02:703,67,0	1/1:1,11:12:33.09:365,33,0	0/0:18,0:18:38.94:0,39,332	0/0:24,0:24:64.49:0,64,579	0/0:13,0:13:35.99:0,36,312	0/0:25,0:25:68.96:0,69,594	1/1:2,6:8:18.05:199,18,0	0/0:16,0:16:41.97:0,42,360	0/0:15,0:15:35.97:0,36,310	0/0:17,0:17:47.96:0,48,408	0/0:13,0:15:40.02:0,40,317	0/0:24,0:24:56.89:0,57,473	0/0:34,0:34:89.83:0,90,758	0/0:16,0:16:41.95:0,42,356	0/0:16,0:16:47.57:0,48,394	0/0:21,0:21:59.98:0,60,518	0/0:26,0:26:59.01:0,59,501	1/1:8,16:24:19.02:424,19,0	0/0:24,0:24:62.95:0,63,541	0/0:18,0:18:41.95:0,42,356	0/0:12,0:12:26.99:0,27,234
chr10	53566823	.	ATG	A	1126.73	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=4.916;DP=709;FS=0.000;HRun=0;HaplotypeScore=90.8170;InbreedingCoeff=0.9975;MQ=69.54;MQ0=1;MQRankSum=-1.674;QD=19.10;ReadPosRankSum=4.420;VQSLOD=3.3443;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:75.25:0,75,1215	0/0:19,0:19:57.19:0,57,952	0/0:26,0:23:42.64:0,43,690	0/0:17,0:16:35.85:0,36,550	0/0:35,0:35:99:0,105,1722	0/0:26,0:26:78.25:0,78,1272	0/0:20,0:20:54.18:0,54,900	0/0:25,0:25:57.19:0,57,946	0/0:21,0:21:60.20:0,60,993	0/0:33,0:33:96.32:0,96,1578	0/0:28,0:28:81.28:0,81,1335	0/0:27,0:27:78.27:0,78,1284	0/0:26,0:26:69.24:0,69,1136	0/0:18,0:18:48.16:0,48,775	0/0:23,0:23:63.22:0,63,1052	0/0:24,0:24:72.25:0,72,1188	1/1:6,27:33:54.17:702,54,0	1/1:6,20:25:42.14:546,42,0	0/0:13,0:13:30.10:0,30,476	0/0:37,0:37:99:0,102,1675	0/0:21,0:21:51.16:0,51,814	0/0:23,0:23:66.23:0,66,1105	0/0:37,0:37:99:0,99,1642	0/0:21,0:21:57.19:0,57,954	0/0:23,0:23:63.20:0,63,1024	0/0:37,0:37:99:0,105,1728	0/0:33,0:32:90.31:0,90,1467	0/0:8,0:8:21.05:0,21,325
chr10	53567445	.	G	GGTCT	7605.55	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-11.941;DP=737;FS=2.937;HRun=0;HaplotypeScore=156.0067;InbreedingCoeff=0.9424;MQ=74.22;MQ0=3;MQRankSum=2.565;QD=31.96;ReadPosRankSum=-2.497;VQSLOD=4.6397;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:48:99:0,108,1675	0/0:13,0:13:15.05:0,15,236	0/0:38,0:29:23.97:0,24,339	0/0:40,0:33:23.59:0,24,351	0/0:11,0:27:12.25:0,12,54	0/0:4,0:26:37.54:0,38,310	0/0:10,0:26:21.65:0,22,169	1/1:30,5:38:10.12:543,10,0	0/0:5,0:14:22.47:0,22,183	1/1:15,15:31:51.15:1107,51,0	1/1:8,6:15:15.05:361,15,0	0/0:30,0:30:75.26:0,75,1204	0/0:18,0:18:30.10:0,30,480	0/0:5,0:20:35:0,35,296	0/0:17,0:17:24.08:0,24,385	0/0:23,0:23:42.13:0,42,651	0/0:51,0:51:99:0,120,1889	0/0:24,0:24:48.14:0,48,735	1/1:16,11:28:42.04:757,42,0	1/1:7,9:18:23.52:576,24,0	1/1:14,39:54:45.15:2082,45,0	0/0:24,0:24:54.18:0,54,854	0/0:22,0:22:51.14:0,51,736	0/0:25,0:25:60.18:0,60,918	0/0:0,0:13:19.39:0,19,133	1/1:8,12:22:2.97:914,3,0	1/1:10,17:27:45.15:1048,45,0	1/1:2,3:5:9.03:217,9,0
chr10	53569036	.	G	GACA	10070.41	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=18.520;DP=685;FS=2.162;HRun=0;HaplotypeScore=217.7456;InbreedingCoeff=0.9969;MQ=87.48;MQ0=0;MQRankSum=-17.866;QD=36.75;ReadPosRankSum=0.715;VQSLOD=5.0433;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,156,2528	0/0:8,0:8:24.08:0,24,400	0/0:30,0:30:81.07:0,81,1225	0/0:27,0:27:71.18:0,71,1033	1/1:13,14:27:19.61:564,20,0	1/1:7,15:22:48.16:839,48,0	1/1:3,8:11:27.70:424,28,0	0/0:31,0:31:90.30:0,90,1476	1/1:5,12:17:42.14:728,42,0	1/1:12,10:22:63.20:1095,63,0	1/1:12,5:17:29.92:360,30,0	0/0:26,0:26:75.24:0,75,1225	0/0:29,0:29:84.24:0,84,1369	1/1:6,11:17:45.15:734,45,0	0/0:37,0:37:99:0,108,1797	0/0:24,0:24:72.23:0,72,1175	0/0:35,0:35:99:0,105,1749	0/0:24,0:24:72.25:0,72,1199	1/1:12,5:22:31.93:808,32,0	1/1:11,12:23:51.91:778,52,0	1/1:11,4:15:20.97:277,21,0	0/0:30,0:30:90.31:0,90,1498	0/0:31,0:31:93.30:0,93,1506	0/0:26,0:26:78.25:0,78,1274	1/1:10,21:31:78.17:1259,78,0	1/1:11,12:23:63.21:1108,63,0	1/1:5,13:18:28.82:763,29,0	1/1:3,6:9:18.06:333,18,0
chr10	53569042	.	G	GT	4959.69	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=18.028;DP=576;FS=10.909;HRun=2;HaplotypeScore=165.0659;InbreedingCoeff=0.9710;MQ=92.96;MQ0=0;MQRankSum=-17.330;QD=29.35;ReadPosRankSum=4.616;VQSLOD=3.0375;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:56:99:0,160,2206	0/0:8,0:8:24.07:0,24,319	0/0:28,0:28:78.71:0,79,1074	0/0:27,0:27:67.43:0,67,876	1/1:2,14:16:38.90:411,39,0	1/1:2,15:17:50.90:530,51,0	1/1:0,8:8:24.06:261,24,0	0/0:28,0:28:84.28:0,84,1173	1/1:0,12:12:36.08:390,36,0	1/1:0,10:10:30.09:368,30,0	1/1:1,5:6:5.08:118,5,0	0/0:24,0:24:72.24:0,72,1004	0/0:29,0:29:87.26:0,87,1178	1/1:0,13:13:39:399,39,0	0/0:37,0:37:99:0,108,1473	0/0:24,0:24:72.24:0,72,1005	0/0:36,0:36:99:0,108,1510	0/0:24,0:24:72.24:0,72,1006	1/1:5,5:10:14.99:184,15,0	1/1:2,12:15:38.70:431,39,0	1/1:1,4:5:9.02:100,9,0	0/0:30,0:30:87.29:0,87,1217	0/0:29,0:29:87.29:0,87,1216	0/0:27,0:27:81.27:0,81,1132	1/1:1,21:23:64.99:700,65,0	1/1:1,12:13:36.04:434,36,0	1/1:1,13:15:26.10:419,26,0	1/1:0,6:6:18.06:216,18,0
chr10	53569045	.	A	ATGTAGG	24830.55	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=19.504;DP=679;FS=5.456;HRun=0;HaplotypeScore=222.5255;InbreedingCoeff=0.9986;MQ=86.49;MQ0=0;MQRankSum=-19.382;QD=92.31;ReadPosRankSum=0.637;VQSLOD=5.1221;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,160,3994	0/0:8,0:8:24.06:0,24,560	0/0:30,0:30:87.30:0,87,2016	0/0:25,0:25:70.74:0,71,1563	1/1:5,14:19:42.14:1456,42,0	1/1:5,15:20:60.16:2034,60,0	1/1:10,8:18:51.18:1775,51,0	0/0:26,0:26:75.24:0,75,1841	1/1:7,12:19:54.18:1892,54,0	1/1:3,10:13:39.13:1440,39,0	1/1:4,5:9:21.06:668,21,0	0/0:25,0:25:75.26:0,75,1861	0/0:30,0:30:87.28:0,87,2131	1/1:6,13:19:57.18:1823,57,0	0/0:37,0:37:99:0,108,2730	0/0:25,0:25:75.24:0,75,1839	0/0:36,0:36:99:0,108,2701	0/0:25,0:25:72.25:0,72,1845	1/1:14,5:19:48.13:1489,48,0	1/1:9,12:22:54.19:1946,54,0	1/1:12,4:16:33.07:1052,33,0	0/0:31,0:31:90.31:0,90,2250	0/0:30,0:30:90.30:0,90,2219	0/0:27,0:27:81.28:0,81,2026	1/1:10,21:32:84.29:2943,84,0	1/1:17,12:29:87.29:3122,87,0	1/1:13,12:26:69.24:2418,69,0	1/1:1,6:7:21.07:774,21,0
chr10	53570877	.	T	TC	682.95	PASS	AB=0.773;AC=12;AF=0.222;AN=54;BaseQRankSum=0.493;DP=415;FS=0.000;HRun=2;HaplotypeScore=57.2723;InbreedingCoeff=0.8134;MQ=51.20;MQ0=22;MQRankSum=2.115;QD=6.90;ReadPosRankSum=1.641;VQSLOD=0.7688;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:56.21:0,56,389	0/0:6,0:6:14.92:0,15,125	0/1:11,0:4:2.97:8,0,3	./.	1/1:21,5:24:5.72:265,6,0	1/1:4,9:13:8.55:57,9,0	1/1:14,0:13:25.79:169,26,0	0/0:18,0:16:35.48:0,35,250	1/1:2,9:11:8.61:75,9,0	0/0:10,0:8:13.17:0,13,93	0/0:10,0:9:23.99:0,24,208	0/0:11,0:10:14.99:0,15,129	0/0:7,0:7:14.88:0,15,111	0/1:1,5:6:0:0,0,0	0/0:24,0:24:44.62:0,45,325	0/0:17,0:17:40.65:0,41,307	0/0:32,0:31:52.80:0,53,374	0/0:16,0:16:20.89:0,21,167	0/0:13,0:10:17.32:0,17,110	0/0:7,0:6:11.99:0,12,102	0/0:8,0:6:17.95:0,18,144	0/0:25,0:24:41.66:0,42,333	0/0:22,0:22:38.69:0,39,310	0/0:16,0:16:14.79:0,15,124	1/1:18,0:18:35.59:270,36,0	0/0:14,0:13:32.91:0,33,276	0/0:10,0:9:17.98:0,18,150	0/0:14,0:11:11.71:0,12,82
chr10	53571478	.	T	TGC	917.91	PASS	AB=0.929;AC=11;AF=0.196;AN=56;BaseQRankSum=9.110;DP=491;FS=7.438;HRun=0;HaplotypeScore=83.1100;InbreedingCoeff=0.1525;MQ=58.30;MQ0=8;MQRankSum=1.281;QD=6.20;ReadPosRankSum=1.101;VQSLOD=2.2485;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:53.88:0,54,454	0/0:6,0:6:17.94:0,18,189	0/0:12,0:11:26.24:0,26,334	0/0:28,0:21:56.31:0,56,657	0/0:12,0:11:20.97:0,21,173	0/0:23,0:20:4.81:0,5,111	0/0:17,0:15:0.35:0,0,87	0/0:14,0:13:34.09:0,34,271	0/0:23,0:23:22.33:0,22,167	0/1:11,12:24:67.98:224,0,68	1/1:8,0:8:17.85:127,18,0	0/0:27,0:27:30.02:0,30,356	0/0:22,0:22:53.84:0,54,501	0/0:19,0:16:2.40:0,2,122	0/0:5,0:5:12:0,12,120	0/0:13,0:13:33.47:0,33,336	0/0:21,0:19:20.58:0,21,217	0/0:21,0:19:45.92:0,46,320	0/1:13,0:11:19.76:20,0,143	0/1:9,0:9:26.36:77,0,26	0/1:30,0:28:56.72:272,0,57	0/0:13,0:13:24.89:0,25,255	0/0:4,0:4:11.92:0,12,91	0/0:34,0:33:71.89:0,72,709	0/1:15,0:15:6.78:7,0,41	1/1:18,0:18:8.94:183,9,0	0/1:19,0:18:38.92:39,0,47	0/1:10,2:12:7.21:121,0,7
chr10	53571480	.	T	TGTGCGG	3001.01	PASS	AB=0.949;AC=19;AF=0.339;AN=56;BaseQRankSum=2.388;DP=480;FS=2.801;HRun=0;HaplotypeScore=121.8595;InbreedingCoeff=0.2389;MQ=60.03;MQ0=5;MQRankSum=-2.294;QD=12.20;ReadPosRankSum=-4.334;VQSLOD=0.8001;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:26:55.40:0,55,853	0/0:7,0:7:17.87:0,18,264	0/0:14,0:13:36.08:0,36,554	0/0:29,0:22:59.94:0,60,981	0/0:13,0:12:0:0,0,305	0/1:22,0:19:19.90:20,0,219	0/1:17,0:15:41.31:41,0,194	0/1:13,0:12:34.31:34,0,252	0/1:23,0:23:84.66:85,0,271	1/1:24,0:24:19.09:585,19,0	1/1:9,0:9:18.95:288,19,0	0/0:23,0:23:32.38:0,32,666	0/0:20,0:20:54.15:0,54,872	0/0:19,0:17:25.94:0,26,330	0/0:5,0:5:12.04:0,12,211	0/0:13,0:13:33.07:0,33,599	0/1:21,0:19:75.98:76,0,326	0/1:21,0:20:99:161,0,366	0/1:12,0:10:60.87:147,0,61	0/1:8,0:8:9.16:200,0,9	1/1:30,0:28:26.12:689,26,0	0/0:13,0:13:27.09:0,27,454	0/0:4,0:4:12.04:0,12,179	0/0:34,0:33:72.18:0,72,1255	0/0:13,0:13:8.24:0,8,102	1/1:15,0:16:31.75:569,32,0	0/1:3,11:18:35.55:75,0,36	1/1:3,8:12:12.03:217,12,0
chr10	53573248	.	T	TACAC	2486.41	PASS	AB=0.894;AC=36;AF=0.720;AN=50;BaseQRankSum=1.128;DP=549;FS=17.737;HRun=0;HaplotypeScore=113.2465;InbreedingCoeff=0.4375;MQ=64.94;MQ0=6;MQRankSum=0.174;QD=6.96;ReadPosRankSum=-1.495;VQSLOD=1.1250;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:4.99:0,5,91	1/1:6,0:6:6.02:98,6,0	./.	./.	./.	0/0:19,0:19:2.79:0,3,46	0/0:25,0:26:14.68:0,15,182	1/1:19,0:17:1.83:4,2,0	0/0:14,0:14:6.01:0,6,85	1/1:23,0:23:13.38:157,13,0	1/1:17,0:17:6.02:89,6,0	1/1:10,4:20:3.01:71,3,0	1/1:18,0:18:17.97:167,18,0	0/0:13,0:13:6.01:0,6,72	0/1:19,5:25:33.98:198,0,34	1/1:15,5:25:2.91:70,3,0	1/1:34,0:34:24.03:338,24,0	0/1:10,0:10:8.33:79,0,8	1/1:10,0:10:3.01:44,3,0	1/1:16,0:16:6.02:99,6,0	1/1:27,0:28:16.33:187,16,0	1/1:17,0:17:6.01:66,6,0	1/1:15,0:14:6.02:109,6,0	1/1:30,0:30:30.04:379,30,0	0/0:14,0:15:2.55:0,3,130	1/1:20,0:20:19.82:256,20,0	1/1:15,0:15:12.51:207,13,0	1/1:8,0:8:2.98:22,3,0
chr10	53573250	.	C	CAC	1591.55	PASS	AB=1.000;AC=36;AF=0.750;AN=48;BaseQRankSum=1.925;DP=588;FS=15.631;HRun=0;HaplotypeScore=93.3403;InbreedingCoeff=0.4282;MQ=62.63;MQ0=7;MQRankSum=-1.764;QD=4.11;ReadPosRankSum=-1.048;VQSLOD=1.2055;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:6:0,6,64	1/1:7,0:7:5.99:49,6,0	./.	./.	./.	0/0:22,0:22:2.69:0,3,32	0/0:31,0:30:15.81:0,16,138	1/1:22,0:20:0.47:2,0,0	0/0:15,0:15:6.01:0,6,64	1/1:24,0:24:10.43:113,10,0	1/1:14,5:20:6.01:64,6,0	1/1:22,0:22:3:27,3,0	1/1:18,0:18:17.98:167,18,0	0/0:13,0:13:6:0,6,57	0/1:27,0:26:20.05:66,0,20	1/1:26,0:26:3:26,3,0	1/1:35,0:35:16.34:211,16,0	1/1:10,0:10:5.98:47,6,0	1/1:10,0:10:3.01:44,3,0	1/1:17,0:17:6:51,6,0	1/1:30,0:30:17.79:172,18,0	1/1:16,0:16:6.01:66,6,0	1/1:15,0:14:6.01:67,6,0	1/1:32,0:32:30:310,30,0	0/1:19,0:19:29.06:29,0,105	1/1:20,0:20:16.24:113,16,0	1/1:16,0:16:12.87:114,13,0	./.
chr10	53573281	.	A	ACA	1613.07	PASS	AB=1.000;AC=36;AF=0.750;AN=48;BaseQRankSum=1.027;DP=602;FS=15.586;HRun=0;HaplotypeScore=79.2409;InbreedingCoeff=0.4474;MQ=52.53;MQ0=13;MQRankSum=-0.342;QD=4.05;ReadPosRankSum=-0.557;VQSLOD=0.7396;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:6:0,6,64	1/1:7,0:7:5.99:49,6,0	./.	./.	./.	0/0:24,0:24:3.49:0,3,33	0/0:34,0:33:13.96:0,14,132	1/1:17,0:15:0.47:1,0,0	0/0:22,0:22:7.23:0,7,67	1/1:22,0:22:9.96:112,10,0	1/1:17,0:17:5.50:63,5,0	1/1:25,0:25:3:27,3,0	1/1:16,4:22:17.96:167,18,0	0/0:14,0:14:6:0,6,57	0/1:23,0:22:20.05:66,0,20	1/1:25,0:25:3.47:27,3,0	1/1:33,0:33:16.34:211,16,0	1/1:14,0:14:8.98:74,9,0	1/1:12,0:11:3.48:45,3,0	1/1:21,0:21:6:51,6,0	1/1:40,0:40:17.81:172,18,0	1/1:10,0:10:6.01:66,6,0	1/1:21,0:20:6.01:67,6,0	1/1:35,0:34:30:310,30,0	0/1:20,0:19:29.06:29,0,105	1/1:17,0:17:14.82:110,15,0	1/1:17,0:17:12.87:113,13,0	./.
chr10	53573537	.	G	GTTTT	6341.68	PASS	AB=0.981;AC=17;AF=0.304;AN=56;BaseQRankSum=-4.617;DP=706;FS=2.287;HRun=10;HaplotypeScore=128.5889;InbreedingCoeff=0.9145;MQ=79.02;MQ0=5;MQRankSum=-2.289;QD=29.22;ReadPosRankSum=-1.767;VQSLOD=2.7723;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:29:71.67:0,72,961	0/0:12,0:12:36.10:0,36,489	0/0:52,0:40:22.18:0,22,428	0/1:52,0:34:14.31:14,0,291	0/0:41,0:43:99:0,123,1673	0/0:29,0:30:85.49:0,85,1152	0/0:18,0:19:52.04:0,52,706	0/0:35,0:35:71.93:0,72,965	0/0:16,0:16:48.16:0,48,678	1/1:10,8:20:33.98:589,34,0	1/1:3,13:20:39:667,39,0	0/0:25,0:25:69.20:0,69,968	0/0:27,0:27:69.09:0,69,948	0/0:16,0:16:39.07:0,39,548	0/0:24,0:24:63.17:0,63,888	0/0:14,0:14:39.09:0,39,514	0/0:33,0:33:96.30:0,96,1357	0/0:31,0:31:84.25:0,84,1183	1/1:13,9:28:48.11:963,48,0	1/1:4,19:26:66.07:1283,66,0	1/1:0,10:12:21.07:481,21,0	0/0:15,0:18:41.99:0,42,538	0/0:24,0:24:72.21:0,72,983	0/0:19,0:21:57.11:0,57,768	0/0:19,0:19:45.02:0,45,619	1/1:6,9:17:36.12:783,36,0	1/1:3,22:25:53.87:1238,54,0	1/1:10,4:14:15.05:323,15,0
chr10	53577782	.	C	CA	6383.47	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-14.641;DP=685;FS=0.322;HRun=7;HaplotypeScore=65.4529;InbreedingCoeff=0.9997;MQ=79.59;MQ0=0;MQRankSum=-1.167;QD=30.99;ReadPosRankSum=0.337;VQSLOD=4.8944;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,117,1113	0/0:9,0:9:27.03:0,27,255	0/0:21,0:21:39.04:0,39,372	0/0:13,0:13:29.78:0,30,258	0/0:28,0:28:75.10:0,75,719	0/0:25,0:25:63.09:0,63,608	0/0:20,0:19:51.08:0,51,492	0/0:38,0:38:90.11:0,90,864	0/0:26,0:26:72.11:0,72,695	1/1:3,22:25:63.19:760,63,0	1/1:1,21:22:63.15:745,63,0	0/0:23,0:23:69.11:0,69,666	0/0:29,0:29:81.12:0,81,777	0/0:22,0:22:63.08:0,63,602	0/0:34,0:34:90.14:0,90,869	0/0:21,0:21:54.08:0,54,522	0/0:26,0:26:69.02:0,69,649	0/0:27,0:27:78.11:0,78,747	1/1:6,16:22:48.15:580,48,0	1/1:2,32:34:93.20:1088,93,0	1/1:4,24:28:58.25:820,58,0	0/0:22,0:22:63.10:0,63,608	0/0:16,0:16:45.07:0,45,432	0/0:15,0:15:45.07:0,45,435	0/0:21,0:21:60.10:0,60,579	1/1:4,24:28:72.22:870,72,0	1/1:1,31:31:84.26:1015,84,0	1/1:0,15:15:41.64:506,42,0
chr10	53578809	.	TG	T	8253	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=19.059;DP=726;FS=2.538;HRun=1;HaplotypeScore=107.9878;InbreedingCoeff=0.9999;MQ=74.93;MQ0=0;MQRankSum=-9.661;QD=39.87;ReadPosRankSum=0.686;VQSLOD=4.7570;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,111,1775	0/0:11,0:11:33.11:0,33,528	0/0:23,0:22:65.97:0,66,942	0/0:24,0:24:71.24:0,71,1038	1/1:2,14:16:45.15:628,45,0	1/1:0,16:16:48.16:670,48,0	1/1:2,23:25:72.24:1005,72,0	1/1:0,29:29:87.29:1215,87,0	1/1:0,27:27:78.26:1090,78,0	0/0:22,0:22:66.23:0,66,1055	0/0:11,0:11:33.11:0,33,527	0/0:35,0:35:99:0,105,1653	0/0:36,0:36:99:0,105,1629	1/1:5,23:28:69.23:963,69,0	0/0:30,0:30:90.31:0,90,1439	0/0:25,1:26:36.27:0,36,1108	1/1:0,22:22:63.21:879,63,0	1/1:0,15:15:45.15:629,45,0	0/0:25,0:25:75.26:0,75,1187	0/0:31,0:31:93.32:0,93,1479	0/0:50,0:50:99:0,151,2396	0/0:28,0:28:84.29:0,84,1327	0/0:18,0:18:54.17:0,54,839	0/0:37,0:37:99:0,111,1751	1/1:2,27:29:84.28:1174,84,0	0/0:31,0:31:93.32:0,93,1481	0/0:26,0:26:78.25:0,78,1223	0/0:17,0:17:51.17:0,51,815
chr10	53578865	.	CCTCGTG	C	10409.66	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=19.159;DP=856;FS=0.654;HRun=0;HaplotypeScore=224.5894;InbreedingCoeff=0.9947;MQ=84.96;MQ0=0;MQRankSum=-17.572;QD=46.47;ReadPosRankSum=-1.642;VQSLOD=4.4933;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,154,5012	0/0:21,0:21:60.21:0,60,2137	0/0:29,0:29:72.15:0,72,2182	0/0:33,0:33:93.18:0,93,2370	1/1:4,16:20:11.92:215,12,0	1/1:5,15:20:51.13:1062,51,0	1/1:3,24:27:65.72:1179,66,0	1/1:2,26:28:78.27:1654,78,0	1/1:6,24:30:81.28:1813,81,0	0/0:29,0:29:81.28:0,81,2639	0/0:22,0:22:63.22:0,63,2164	0/0:29,0:29:84.25:0,84,2753	0/0:40,0:40:99:0,111,3647	1/1:4,26:30:75.26:1679,75,0	0/0:33,0:33:96.33:0,96,3076	0/0:28,0:28:84.29:0,84,2640	1/1:1,18:19:42.10:918,42,0	1/1:5,12:17:24.08:498,24,0	0/0:32,0:32:81.27:0,81,2347	0/0:34,0:34:87.30:0,87,2621	0/0:61,0:61:99:0,178,5814	0/0:29,0:29:84.24:0,84,2657	0/0:28,0:28:78.27:0,78,2648	0/0:30,0:30:84.29:0,84,2897	1/1:8,25:33:66.17:1392,66,0	0/0:40,0:40:99:0,117,3717	0/0:37,0:37:99:0,105,3621	0/0:22,0:22:63.22:0,63,2060
chr10	53580749	.	AT	A	2101.35	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=10.612;DP=686;FS=0.000;HRun=1;HaplotypeScore=79.8607;InbreedingCoeff=0.9998;MQ=82.60;MQ0=0;MQRankSum=-1.848;QD=36.87;ReadPosRankSum=-0.287;VQSLOD=3.7382;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:63.18:0,63,954	0/0:10,0:10:30.10:0,30,476	0/0:27,0:27:78.23:0,78,1179	0/0:14,0:14:42.09:0,42,619	0/0:29,0:29:87.27:0,87,1340	0/0:27,0:27:81.26:0,81,1269	0/0:17,0:17:51.13:0,51,740	1/1:0,25:25:75.25:1048,75,0	0/0:24,0:24:72.15:0,72,1007	0/0:47,0:47:99:0,141,2236	0/0:27,0:27:81.26:0,81,1268	0/0:26,0:26:78.27:0,78,1240	0/0:21,0:21:63.21:0,63,1003	0/0:27,0:27:81.25:0,81,1247	0/0:28,0:28:84.24:0,84,1271	0/0:26,0:26:78.23:0,78,1177	1/1:0,14:14:42.14:586,42,0	1/1:1,17:18:46:610,46,0	0/0:22,0:22:66.21:0,66,1009	0/0:35,0:35:99:0,102,1551	0/0:36,0:36:99:0,108,1603	0/0:28,0:28:84.25:0,84,1291	0/0:28,0:28:84.24:0,84,1266	0/0:23,0:23:69.24:0,69,1099	0/0:24,0:24:72.21:0,72,1085	0/0:18,0:18:54.18:0,54,863	0/0:28,0:27:84.27:0,84,1317	0/0:16,0:16:48.12:0,48,717
chr10	53581351	.	CG	C	2669.11	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=12.823;DP=684;FS=30.960;HRun=3;HaplotypeScore=70.0266;InbreedingCoeff=0.9996;MQ=88.39;MQ0=1;MQRankSum=-1.658;QD=37.07;ReadPosRankSum=-2.822;VQSLOD=0.8624;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:72,0:72:99:0,211,3200	0/0:10,0:10:30.07:0,30,445	0/0:24,0:24:71.05:0,71,1087	0/0:24,0:24:48.84:0,49,995	0/0:28,0:28:81.73:0,82,1254	0/0:26,0:26:75.25:0,75,1181	0/0:23,0:23:69.23:0,69,1093	1/1:0,38:38:99:1556,114,0	0/0:25,0:25:75.25:0,75,1177	0/0:28,0:28:81.27:0,81,1272	0/0:14,0:14:42.14:0,42,663	0/0:21,0:21:63.21:0,63,1000	0/0:30,0:29:87.29:0,87,1363	0/0:25,0:25:75.23:0,75,1153	0/0:23,0:23:69.21:0,69,1067	0/0:27,0:27:81.27:0,81,1262	1/1:0,17:17:48.16:671,48,0	1/1:0,17:17:42.14:584,42,0	0/0:17,0:17:48.11:0,48,707	0/0:17,0:17:51.17:0,51,815	0/0:42,0:42:99:0,123,1900	0/0:16,0:16:45.15:0,45,716	0/0:15,0:15:45.15:0,45,705	0/0:26,0:26:78.20:0,78,1186	0/0:19,0:19:57.16:0,57,878	0/0:28,0:28:84.24:0,84,1308	0/0:22,0:22:66.21:0,66,1020	0/0:10,0:10:30.10:0,30,479
chr10	53581746	.	TCACACACACA	T	2088.91	PASS	AB=0.692;AC=13;AF=0.241;AN=54;BaseQRankSum=3.683;DP=556;FS=0.000;HRun=0;HaplotypeScore=163.5267;InbreedingCoeff=0.6069;MQ=75.19;MQ0=3;MQRankSum=-6.981;QD=15.95;ReadPosRankSum=-1.518;VQSLOD=2.5873;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:69.19:0,69,2744	0/0:9,0:9:18.04:0,18,715	./.	0/0:38,0:26:5.99:0,6,64	0/0:21,0:21:24.55:0,25,979	0/0:7,0:19:12.02:0,12,375	0/0:30,0:28:39.57:0,40,1337	0/0:26,0:26:18.06:0,18,518	0/1:6,0:11:2.64:3,0,560	1/1:23,0:23:5.80:42,6,0	1/1:7,5:12:12.04:200,12,0	0/0:12,0:18:27.06:0,27,714	0/0:10,0:13:9.03:0,9,260	0/0:9,0:14:12.03:0,12,420	0/0:14,0:14:27.07:0,27,1071	0/0:21,0:21:39.12:0,39,1609	0/0:11,0:19:38.32:0,38,531	0/0:3,0:17:30.10:0,30,491	1/1:14,4:19:13.75:424,14,0	0/1:13,6:20:99:236,0,122	0/0:15,4:19:5.83:0,6,33	0/0:20,0:22:42.14:0,42,1283	0/0:5,0:7:6:0,6,75	0/0:13,0:29:44.98:0,45,1346	0/0:20,0:20:30.08:0,30,1048	1/1:14,7:21:15.06:526,15,0	1/1:6,6:13:0.11:581,0,0	0/1:5,5:11:0.90:236,0,1
chr10	53583282	.	GT	G	3863.52	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=12.202;DP=726;FS=11.115;HRun=9;HaplotypeScore=114.1899;InbreedingCoeff=0.8955;MQ=82.96;MQ0=0;MQRankSum=-2.859;QD=19.13;ReadPosRankSum=1.615;VQSLOD=2.8198;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,2:33:62.71:0,63,944	0/0:9,0:9:21.06:0,21,242	0/0:28,1:29:26.15:0,26,578	0/0:21,0:21:30.93:0,31,341	1/1:7,29:36:72.77:646,73,0	1/1:2,15:17:42.02:384,42,0	1/1:3,26:29:63.03:576,63,0	0/1:30,0:30:35.92:36,0,159	1/1:3,26:29:75.04:686,75,0	0/0:35,0:35:79.67:0,80,932	0/0:24,0:24:57.10:0,57,626	0/0:29,0:29:75.16:0,75,839	0/0:30,0:30:72.20:0,72,820	1/1:1,30:31:87.52:796,88,0	0/0:35,0:35:93.28:0,93,1073	0/0:19,0:19:51.12:0,51,562	0/0:24,0:24:40.19:0,40,284	0/0:23,0:23:34.33:0,34,249	0/0:25,0:25:46.28:0,46,606	0/0:33,0:33:82.98:0,83,898	0/0:16,0:16:15.78:0,16,306	0/0:23,0:23:66.17:0,66,742	0/0:16,0:16:39.12:0,39,450	0/0:16,1:17:20.68:0,21,492	1/1:0,30:30:81.04:740,81,0	0/0:31,0:31:81.20:0,81,916	0/0:33,0:32:90.20:0,90,999	0/0:19,0:19:48:0,48,500
chr10	53584219	.	A	AT	1513.75	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=0.591;DP=632;FS=6.169;HRun=7;HaplotypeScore=62.9638;InbreedingCoeff=0.9971;MQ=80.48;MQ0=0;MQRankSum=0.690;QD=20.46;ReadPosRankSum=-3.496;VQSLOD=2.2306;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,114,1095	0/0:7,0:7:21:0,21,194	0/0:14,0:14:23.98:0,24,230	0/0:17,0:17:28.92:0,29,329	0/0:25,0:24:63.08:0,63,603	0/0:20,0:20:51.08:0,51,492	0/0:20,0:20:57.09:0,57,551	1/1:2,31:33:93.29:1124,93,0	0/0:27,0:27:72.11:0,72,695	0/0:25,0:25:69.11:0,69,666	0/0:20,0:20:51.08:0,51,492	0/0:26,0:26:72.11:0,72,694	0/0:16,0:16:48.08:0,48,463	0/0:23,0:23:54.07:0,54,521	0/0:31,0:31:90.13:0,90,863	0/0:23,0:23:66.11:0,66,637	1/1:1,1:27:66.26:358,66,0	1/1:0,0:14:34.47:175,34,0	0/0:19,0:19:57.07:0,57,544	0/0:19,0:19:51.08:0,51,492	0/0:27,0:27:78.12:0,78,753	0/0:23,0:23:60.07:0,60,568	0/0:32,0:32:87.13:0,87,840	0/0:25,0:25:69.10:0,69,666	0/0:16,0:16:45.07:0,45,435	0/0:21,0:21:50.82:0,51,492	0/0:29,0:29:75.11:0,75,724	0/0:11,0:11:27.04:0,27,261
chr10	53585094	.	GTGTTTGTGTT	G	6871.20	PASS	AB=0.932;AC=20;AF=0.357;AN=56;BaseQRankSum=14.754;DP=738;FS=9.714;HRun=0;HaplotypeScore=239.8476;InbreedingCoeff=0.1666;MQ=65.18;MQ0=4;MQRankSum=-12.886;QD=18.27;ReadPosRankSum=0.610;VQSLOD=2.6108;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:75.21:0,75,2440	0/0:10,0:10:30.10:0,30,1142	0/0:35,0:25:44.32:0,44,1062	0/0:22,0:15:30.05:0,30,698	0/1:5,15:20:1.56:339,0,2	1/1:5,21:26:36.40:1197,36,0	0/1:9,16:25:1.66:163,0,2	0/1:22,0:22:7.54:61,0,8	1/1:5,18:23:21.25:784,21,0	0/1:27,0:27:99:219,0,450	0/1:20,0:20:99:361,0,449	0/0:34,0:34:84.72:0,85,2507	0/0:32,0:32:96.30:0,96,3422	1/1:15,7:22:13.63:642,14,0	0/0:46,0:46:99:0,135,4931	0/0:31,0:31:93.30:0,93,3242	0/1:19,0:19:5.68:183,0,6	0/1:20,0:20:20.84:33,0,21	0/1:22,0:20:99:358,0,451	0/1:24,0:23:99:247,0,446	0/0:33,0:33:8.74:0,9,765	0/0:35,0:35:86.94:0,87,2615	0/0:20,0:20:57.16:0,57,1839	0/0:33,0:33:96.32:0,96,3595	1/1:14,9:23:20.99:827,21,0	0/1:35,0:35:99:432,0,789	0/1:31,0:30:99:688,0,483	0/1:17,0:16:99:337,0,363
chr10	53585104	.	TTGTGTGTGTG	T	11001.33	PASS	AB=0.714;AC=31;AF=0.574;AN=54;BaseQRankSum=13.056;DP=743;FS=0.000;HRun=0;HaplotypeScore=229.4595;InbreedingCoeff=0.8475;MQ=55.43;MQ0=8;MQRankSum=-9.765;QD=28.21;ReadPosRankSum=-1.851;VQSLOD=3.9665;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:57.18:0,57,2122	0/0:15,0:17:36.12:0,36,1422	0/0:27,0:16:9.92:0,10,236	0/0:18,0:11:6.02:0,6,107	1/1:21,0:21:20.32:406,20,0	1/1:30,0:30:51.94:1301,52,0	1/1:24,0:24:8.88:200,9,0	./.	1/1:26,0:26:34.80:853,35,0	1/1:10,12:22:40.65:692,41,0	1/1:9,15:24:12.06:766,12,0	0/0:29,0:32:54.66:0,55,2182	0/0:34,0:35:72.23:0,72,2815	1/1:20,0:20:26.97:670,27,0	0/0:44,0:49:99:0,99,4028	0/0:30,0:30:54.19:0,54,2505	1/1:18,0:18:6.02:139,6,0	1/1:20,0:20:2.88:49,3,0	1/1:13,13:24:32.40:771,32,0	1/1:9,14:22:33.08:722,33,0	0/1:21,14:35:33.02:135,0,33	0/0:31,0:35:60.20:0,60,2481	0/0:21,0:23:41.35:0,41,1550	0/0:38,0:36:72.25:0,72,3035	1/1:24,0:24:39:919,39,0	1/1:13,20:34:35.51:1217,36,0	1/1:12,16:28:51.17:1439,51,0	1/1:7,8:13:24.08:723,24,0
chr10	53585393	.	GT	G	6283.54	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=4.471;DP=515;FS=23.593;HRun=8;HaplotypeScore=58.7157;InbreedingCoeff=0.9967;MQ=89.71;MQ0=0;MQRankSum=-2.623;QD=20.74;ReadPosRankSum=3.694;VQSLOD=3.4307;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:72.14:0,72,818	0/0:7,0:7:18.05:0,18,210	0/0:26,0:26:48.82:0,49,611	0/0:15,0:15:21.22:0,21,291	1/1:0,12:12:30.04:287,30,0	1/1:5,10:15:21.01:203,21,0	1/1:7,18:25:39.03:377,39,0	1/1:2,15:17:45.07:434,45,0	1/1:5,14:19:36.03:348,36,0	1/1:5,14:19:42.05:399,42,0	1/1:3,9:12:27.04:260,27,0	0/0:22,0:22:66.17:0,66,766	0/0:18,0:18:51.11:0,51,566	1/1:5,11:16:21.01:203,21,0	0/0:24,0:24:72.17:0,72,824	0/0:26,0:26:69.16:0,69,766	1/1:1,25:26:72.08:686,72,0	1/1:7,13:20:39.03:376,39,0	1/1:2,13:15:39.03:366,39,0	1/1:2,12:15:36.05:346,36,0	1/1:1,16:17:39.06:377,39,0	0/0:19,0:19:45.05:0,45,511	0/0:12,0:12:36.11:0,36,435	0/0:19,0:19:57.14:0,57,656	1/1:3,14:17:36.05:348,36,0	1/1:2,19:21:54.08:521,54,0	1/1:4,21:25:42.05:406,42,0	1/1:0,12:12:36.06:347,36,0
chr10	53586509	.	C	CG	3132.35	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=12.420;DP=619;FS=5.463;HRun=6;HaplotypeScore=82.2817;InbreedingCoeff=0.9997;MQ=84.72;MQ0=0;MQRankSum=-2.198;QD=29.00;ReadPosRankSum=3.258;VQSLOD=4.3818;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,114,1156	0/0:16,0:16:39.08:0,39,397	0/0:24,0:24:57.08:0,57,568	0/0:26,0:26:63.07:0,63,616	1/1:2,13:15:33.11:415,33,0	1/1:0,18:18:48.15:604,48,0	1/1:3,20:23:56.97:717,57,0	0/0:25,0:25:68.15:0,68,668	1/1:1,18:19:54.17:679,54,0	0/0:22,0:22:48.06:0,48,478	0/0:15,0:15:33.05:0,33,324	0/0:18,0:18:54.12:0,54,551	0/0:19,0:19:54.12:0,54,550	1/1:1,14:15:33.11:415,33,0	0/0:28,0:28:72.13:0,72,721	0/0:20,0:20:54.12:0,54,551	0/0:34,0:34:84.17:0,84,850	0/0:17,0:17:45.10:0,45,459	0/0:16,0:16:45.10:0,45,458	0/0:19,0:19:30.04:0,30,298	0/0:32,0:32:90.20:0,90,918	0/0:21,0:21:54.09:0,54,538	0/0:27,0:27:66.12:0,66,666	0/0:21,0:21:60.14:0,60,612	1/1:3,15:18:39.12:491,39,0	0/0:21,0:20:48.07:0,48,478	0/0:27,0:27:69.15:0,69,704	0/0:13,0:13:39.09:0,39,397
chr10	53587783	.	C	CT	7197.68	PASS	AB=0.565;AC=20;AF=0.357;AN=56;BaseQRankSum=-10.513;DP=721;FS=0.306;HRun=10;HaplotypeScore=71.4638;InbreedingCoeff=0.8422;MQ=62.89;MQ0=2;MQRankSum=0.228;QD=22.22;ReadPosRankSum=-1.875;VQSLOD=4.9707;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,1:26:23.08:0,23,450	0/0:13,0:13:23.79:0,24,195	0/0:24,0:19:28.47:0,28,236	0/0:19,0:15:17.72:0,18,103	0/0:30,0:31:82.89:0,83,667	0/0:22,0:22:56.93:0,57,468	0/0:17,0:17:38.93:0,39,320	1/1:8,20:29:56.76:544,57,0	0/0:27,0:27:74.90:0,75,616	1/1:8,18:26:66.11:676,66,0	0/1:5,18:23:19.80:426,0,20	0/0:24,0:24:59.89:0,60,490	0/0:21,0:21:56.89:0,57,463	0/0:25,0:25:47.28:0,47,433	0/0:23,0:23:62.92:0,63,517	0/0:25,0:26:64.91:0,65,520	0/1:9,28:37:26.27:568,0,26	1/1:4,31:36:67.97:915,68,0	1/1:6,22:29:43.72:696,44,0	1/1:6,27:34:74.30:806,74,0	1/1:2,7:9:18.05:192,18,0	0/0:21,0:21:41.87:0,42,338	0/0:25,0:26:63.16:0,63,517	0/0:23,0:23:62.89:0,63,511	0/0:26,0:26:68.90:0,69,564	1/1:3,25:29:71.97:736,72,0	1/1:4,34:37:90.23:959,90,0	1/1:4,30:34:45.62:680,46,0
chr10	53589619	.	CT	C	241.99	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.004;DP=629;FS=0.737;HRun=11;HaplotypeScore=67.7647;InbreedingCoeff=0.6404;MQ=70.73;MQ0=1;MQRankSum=1.291;QD=11.00;ReadPosRankSum=-2.430;VQSLOD=2.6035;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:93.20:0,93,974	0/0:9,0:9:15.02:0,15,152	0/0:15,1:14:2.47:0,2,221	0/0:10,1:11:4.30:0,4,113	0/0:22,0:22:53.88:0,54,535	0/0:21,0:20:51.12:0,51,535	0/0:15,2:17:8.44:0,8,295	1/1:7,15:22:41.87:336,42,0	0/0:19,1:20:32.50:0,32,550	0/0:35,0:35:78.19:0,78,827	0/0:19,0:20:50.95:0,51,519	0/0:27,0:27:70.66:0,71,725	0/0:20,0:20:54.06:0,54,549	0/0:17,1:18:17.45:0,17,383	0/0:24,0:24:63.13:0,63,661	0/0:29,0:29:69.07:0,69,703	0/0:31,0:31:84.10:0,84,870	0/0:21,1:22:35.50:0,35,574	0/0:35,2:37:43.81:0,44,851	0/0:24,0:26:71.97:0,72,736	0/0:19,0:19:48.03:0,48,489	0/0:17,0:17:42.09:0,42,440	0/0:21,0:21:50.95:0,51,518	0/0:19,0:20:45.09:0,45,466	0/0:20,0:20:39.47:0,39,456	0/0:23,0:23:29.29:0,29,449	0/0:30,2:31:65.51:0,66,866	0/0:10,1:11:5.43:0,5,263
chr10	53590141	.	GA	G	8049.58	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=9.762;DP=662;FS=14.434;HRun=10;HaplotypeScore=67.1340;InbreedingCoeff=0.9801;MQ=74.55;MQ0=0;MQRankSum=-1.575;QD=20.38;ReadPosRankSum=3.361;VQSLOD=4.6630;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,144,1576	0/0:2,0:2:5.85:0,6,47	0/0:23,0:21:18.51:0,19,251	0/0:22,0:20:45.03:0,45,460	1/1:3,19:22:55.76:461,56,0	1/1:2,22:24:21.71:387,22,0	1/1:2,16:18:40.73:362,41,0	1/1:9,21:30:62.97:547,63,0	1/1:4,18:22:41.99:365,42,0	1/1:0,21:21:62.91:537,63,0	1/1:0,22:22:59.87:511,60,0	0/0:32,0:32:93.24:0,93,1021	0/0:19,0:19:48.11:0,48,515	1/1:0,30:30:62.99:547,63,0	0/0:29,0:29:78.19:0,78,847	0/0:17,1:18:22.07:0,22,471	1/1:2,25:27:38.81:566,39,0	1/1:1,22:23:44.98:391,45,0	1/1:4,17:21:45.39:380,45,0	1/1:1,17:18:47.98:417,48,0	1/1:3,26:29:68.98:599,69,0	0/0:23,0:23:63.16:0,63,688	0/0:14,0:14:39.58:0,40,430	0/0:33,0:35:86.96:0,87,907	1/1:2,32:34:86.98:755,87,0	1/1:1,21:22:62.98:547,63,0	1/1:1,25:26:62.99:547,63,0	1/1:0,5:5:15:130,15,0
chr10	53590598	.	G	GC	4353.65	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-11.496;DP=535;FS=0.394;HRun=5;HaplotypeScore=52.0274;InbreedingCoeff=0.9960;MQ=95.78;MQ0=0;MQRankSum=-1.068;QD=32.98;ReadPosRankSum=1.181;VQSLOD=5.2283;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:96.22:0,96,1022	0/0:9,0:9:27.04:0,27,278	0/0:27,0:27:72.01:0,72,733	0/0:23,0:23:57.10:0,57,590	1/1:5,20:25:66.20:841,66,0	1/1:0,29:29:84.27:1105,84,0	1/1:1,14:15:39.10:496,39,0	0/0:19,0:19:48.11:0,48,509	1/1:2,22:24:63.20:828,63,0	0/0:12,0:12:33.07:0,33,342	0/0:6,0:6:18.05:0,18,193	0/0:11,0:11:30.08:0,30,322	0/0:21,0:21:57.12:0,57,603	1/1:0,14:14:36.12:474,36,0	0/0:14,0:14:39.10:0,39,419	0/0:13,0:13:39.10:0,39,419	0/0:28,0:28:81.18:0,81,862	0/0:15,0:15:39.07:0,39,409	0/0:17,0:17:30.04:0,30,311	0/0:13,0:13:33.04:0,33,342	0/0:28,0:28:81.18:0,81,859	0/0:19,0:19:48.08:0,48,496	0/0:8,0:8:18.02:0,18,185	0/0:18,0:18:51.13:0,51,548	1/1:7,18:25:37.08:610,37,0	0/0:23,0:23:63.15:0,63,669	0/0:27,0:27:78.16:0,78,821	0/0:12,0:12:33.08:0,33,355
chr10	53591673	.	A	ATC	1444.80	PASS	AB=0.806;AC=16;AF=0.286;AN=56;BaseQRankSum=1.585;DP=634;FS=1.102;HRun=0;HaplotypeScore=134.1178;InbreedingCoeff=0.8005;MQ=73.04;MQ0=8;MQRankSum=-2.299;QD=9.09;ReadPosRankSum=-1.192;VQSLOD=2.9915;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:36:65.38:0,65,829	0/0:10,0:10:15.05:0,15,184	0/0:35,0:25:35.89:0,36,400	0/0:44,0:29:28.49:0,28,354	1/1:13,0:13:5.99:48,6,0	1/1:16,0:16:19.02:104,19,0	1/1:12,0:12:8.28:52,8,0	1/1:13,22:35:29.17:835,29,0	1/1:21,0:21:19.36:143,19,0	0/0:19,0:19:39.12:0,39,480	0/0:13,0:13:27.07:0,27,319	0/0:31,0:31:75.05:0,75,884	0/0:21,0:21:51.16:0,51,624	1/1:18,0:19:7.36:26,7,0	0/0:18,0:19:44.97:0,45,531	0/0:34,0:34:78.22:0,78,935	0/1:6,6:12:15.78:235,0,16	0/1:16,1:15:3.16:86,0,3	0/0:26,0:25:51.04:0,51,595	0/0:15,0:14:33.10:0,33,406	0/0:24,0:22:33.09:0,33,393	0/0:24,0:24:57.15:0,57,685	0/0:16,0:16:39.12:0,39,480	0/0:31,0:33:68.18:0,68,828	1/1:14,0:14:11.96:107,12,0	0/0:24,0:23:57.18:0,57,702	0/0:33,0:33:69.16:0,69,819	0/0:15,0:15:19.73:0,20,420
chr10	53591681	.	C	CTG	1380.40	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=5.037;DP=615;FS=0.000;HRun=0;HaplotypeScore=127.7771;InbreedingCoeff=0.6804;MQ=63.71;MQ0=22;MQRankSum=-2.593;QD=9.52;ReadPosRankSum=-0.041;VQSLOD=3.2985;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:37:75.65:0,76,1094	0/0:10,0:9:23.64:0,24,288	0/0:28,0:18:50.97:0,51,677	0/0:39,0:24:41.79:0,42,635	1/1:5,8:11:6.02:95,6,0	1/1:8,9:15:21.04:234,21,0	1/1:5,7:11:18:184,18,0	0/1:26,0:26:74.08:314,0,74	1/1:8,12:19:27.03:336,27,0	0/0:19,0:18:51.15:0,51,710	0/0:10,0:10:27.09:0,27,407	0/0:29,0:28:81.19:0,81,1162	0/0:21,0:21:63.08:0,63,865	1/1:2,15:17:8.99:78,9,0	0/0:24,0:24:57.08:0,57,758	0/0:34,0:34:83.62:0,84,1221	0/1:14,0:14:90.06:90,0,117	0/1:14,0:12:34.54:36,0,35	0/0:26,0:23:69.06:0,69,907	0/0:15,0:13:33.11:0,33,504	0/0:25,0:21:12.12:0,12,478	0/0:25,0:25:69.18:0,69,968	0/0:17,0:17:42.13:0,42,619	0/0:35,0:35:83.80:0,84,1128	1/1:4,8:12:12.04:198,12,0	0/0:25,0:22:66.20:0,66,951	0/0:34,0:33:84.17:0,84,1159	0/0:15,0:15:40.43:0,40,563
chr10	53591683	.	CTCTCTG	C	1477.72	PASS	AB=0.833;AC=16;AF=0.286;AN=56;BaseQRankSum=1.744;DP=600;FS=0.515;HRun=0;HaplotypeScore=160.3883;InbreedingCoeff=0.7362;MQ=62.17;MQ0=22;MQRankSum=-1.474;QD=10.63;ReadPosRankSum=-2.861;VQSLOD=2.3655;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:36:69.13:0,69,930	0/0:9,0:8:15.05:0,15,209	0/0:27,0:17:35.89:0,36,400	0/0:38,0:23:25.59:0,26,352	1/1:12,0:10:5.98:48,6,0	1/1:15,0:13:19.02:104,19,0	1/1:12,0:11:8.28:52,8,0	1/1:26,0:26:29.20:835,29,0	1/1:18,0:17:19.36:142,19,0	0/0:18,0:17:39.12:0,39,480	0/0:10,0:10:27.07:0,27,319	0/0:29,0:28:78:0,78,1075	0/0:20,0:20:60.15:0,60,911	1/1:16,0:16:7.36:26,7,0	0/0:23,0:23:54.15:0,54,762	0/0:33,0:33:84.07:0,84,1187	0/1:15,0:15:15.78:234,0,16	0/1:7,7:12:41.98:118,0,42	0/0:25,0:22:50.96:0,51,574	0/0:15,0:13:33.10:0,33,406	0/0:24,0:20:33.09:0,33,393	0/0:24,0:24:57.16:0,57,915	0/0:19,0:19:42.12:0,42,674	0/0:38,0:38:76.86:0,77,1202	1/1:11,0:11:11.96:106,12,0	0/0:24,0:21:57.18:0,57,701	0/0:32,0:31:69.17:0,69,818	0/0:15,0:15:1.34:0,1,401
chr10	53591695	.	CTG	C	283.58	PASS	AB=1.000;AC=12;AF=0.222;AN=54;BaseQRankSum=6.679;DP=524;FS=11.267;HRun=0;HaplotypeScore=114.7968;InbreedingCoeff=0.6898;MQ=53.84;MQ0=31;MQRankSum=-4.090;QD=2.78;ReadPosRankSum=-1.773;VQSLOD=1.6197;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:39:74.97:0,75,1308	0/0:8,0:7:17.90:0,18,311	0/0:19,0:10:3.11:0,3,243	0/1:25,0:11:18.33:18,0,112	./.	1/1:5,9:11:17.31:107,17,0	1/1:3,6:8:8.50:64,8,0	0/0:15,0:14:37.01:0,37,413	1/1:4,11:14:16.54:124,17,0	0/0:13,0:12:32.42:0,32,333	0/0:10,0:9:22.54:0,23,195	0/0:26,0:25:66.18:0,66,1117	0/0:21,0:21:60.14:0,60,1034	1/1:3,10:13:8.38:39,8,0	0/0:27,0:27:62.35:0,62,985	0/0:30,0:30:75.08:0,75,1260	0/0:10,0:10:17.69:0,18,204	0/0:12,0:10:11.66:0,12,116	0/0:15,0:12:32.50:0,33,365	0/0:13,0:11:26.64:0,27,257	0/0:21,0:17:29.98:0,30,295	0/0:21,0:20:51.17:0,51,964	0/0:22,0:21:42.02:0,42,723	0/0:37,0:37:84.14:0,84,1371	1/1:5,6:11:6.02:81,6,0	0/0:22,0:18:53.75:0,54,577	0/0:29,0:26:61.23:0,61,536	0/1:15,0:14:14.63:15,0,315
chr10	53591727	.	CTG	C	1269.21	PASS	AB=0.931;AC=26;AF=0.500;AN=52;BaseQRankSum=11.777;DP=551;FS=9.577;HRun=0;HaplotypeScore=134.2029;InbreedingCoeff=0.4483;MQ=44.36;MQ0=36;MQRankSum=-4.240;QD=4.52;ReadPosRankSum=-5.919;VQSLOD=-0.1867;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:47:79.42:0,79,1372	0/0:11,0:9:20.91:0,21,336	./.	./.	1/1:14,11:22:17.93:152,18,0	0/1:10,6:13:0:1,0,0	1/1:8,5:12:8.60:66,9,0	0/1:33,0:30:95.73:96,0,243	1/1:12,9:20:11.86:84,12,0	0/1:16,2:17:8.22:206,0,8	1/1:16,2:15:8.98:73,9,0	0/0:25,0:24:65.86:0,66,1135	0/0:23,0:23:63.20:0,63,1167	1/1:9,2:11:11.96:114,12,0	0/0:29,0:28:61.71:0,62,1124	0/0:21,2:23:30.13:0,30,749	0/0:14,0:14:1.41:0,1,60	0/1:15,0:13:80.90:81,0,94	0/1:15,0:10:14.20:103,0,14	1/1:15,0:14:6.39:45,6,0	1/1:16,0:12:5.79:37,6,0	0/0:24,0:23:34.08:0,34,701	0/0:30,0:29:44.68:0,45,761	0/0:40,0:39:80.58:0,81,1388	1/1:9,8:16:2.58:25,3,0	0/1:23,1:20:27.63:200,0,28	1/1:19,1:17:5.21:112,5,0	1/1:4,0:3:6:53,6,0
chr10	53591745	.	GTC	G	170.91	PASS	AB=0.976;AC=13;AF=0.232;AN=56;BaseQRankSum=4.040;DP=605;FS=3.540;HRun=0;HaplotypeScore=121.1535;InbreedingCoeff=0.0835;MQ=49.12;MQ0=31;MQRankSum=1.545;QD=0.75;ReadPosRankSum=-0.776;VQSLOD=2.0987;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:51,3:50:6.57:0,7,966	0/0:10,1:10:21.07:0,21,324	0/0:5,0:2:6:0,6,66	0/0:11,0:7:8.47:0,8,30	0/1:32,0:29:6.96:62,0,7	0/1:17,0:14:6.04:6,0,7	1/1:12,0:11:8.60:66,9,0	0/0:45,0:43:23.39:0,23,178	0/1:17,0:16:11.28:40,0,11	0/1:19,0:18:0.32:0,0,83	0/0:28,0:25:5.08:0,5,50	0/0:25,0:24:14:0,14,661	0/1:20,1:21:23.70:24,0,421	1/1:8,0:8:10.10:48,10,0	0/1:30,4:33:40.10:40,0,725	0/0:19,0:19:24.08:0,24,364	0/0:18,0:18:16.92:0,17,123	0/1:14,0:12:4.10:4,0,95	0/0:20,0:16:3.44:0,3,70	0/0:19,0:18:8.47:0,8,52	0/0:15,0:11:6.46:0,6,39	0/0:26,0:25:27.08:0,27,387	0/0:34,0:33:44.77:0,45,651	0/1:37,3:39:8.52:9,0,692	0/1:15,0:15:15.07:15,0,19	0/0:26,0:23:14.02:0,14,150	0/0:13,0:10:0.91:0,1,62	0/0:7,0:6:0.47:0,0,2
chr10	53595135	.	TG	T	1344.63	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=10.292;DP=573;FS=2.237;HRun=10;HaplotypeScore=84.4898;InbreedingCoeff=0.6895;MQ=75.55;MQ0=0;MQRankSum=-0.983;QD=6.20;ReadPosRankSum=1.949;VQSLOD=1.7470;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,1:31:49.13:0,49,760	0/0:8,0:8:11.29:0,11,212	0/0:26,0:22:11.59:0,12,211	0/1:20,0:18:5.31:5,0,133	0/0:17,0:17:15.08:0,15,219	0/0:15,0:15:19.36:0,19,181	0/0:16,0:16:15.17:0,15,254	0/0:8,0:8:3:0,3,26	0/0:25,0:25:34:0,34,466	1/1:19,0:19:10.84:116,11,0	1/1:18,0:18:34.14:167,34,0	0/0:27,0:27:66.17:0,66,723	0/0:26,1:27:46.07:0,46,701	0/0:20,0:20:9.24:0,9,304	0/0:31,1:32:60.98:0,61,866	0/0:23,0:23:63.16:0,63,689	0/0:16,0:16:11.50:0,12,60	0/0:6,0:6:8.72:0,9,49	1/1:12,0:12:3.27:108,3,0	0/1:19,0:19:2.70:106,0,3	1/1:44,0:44:13.67:291,14,0	0/0:18,0:18:9.70:0,10,301	0/0:20,0:20:48:0,48,513	0/0:19,1:21:33.93:0,34,577	0/1:16,0:16:13.16:13,0,166	1/1:19,0:18:29.11:138,29,0	1/1:29,0:29:70.38:380,70,0	1/1:21,0:21:44.10:211,44,0
chr10	53595144	.	GGC	G	1689.93	PASS	AB=1.000;AC=27;AF=0.482;AN=56;BaseQRankSum=8.184;DP=536;FS=1.086;HRun=0;HaplotypeScore=89.3095;InbreedingCoeff=0.2378;MQ=76.62;MQ0=0;MQRankSum=0.033;QD=5.09;ReadPosRankSum=-0.891;VQSLOD=2.1134;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:87.12:0,87,1437	0/0:10,0:10:30.05:0,30,454	0/1:24,0:21:26.75:27,0,397	0/1:22,0:20:13.46:13,0,424	0/1:14,0:14:36.38:36,0,144	0/1:11,0:11:38.38:38,0,107	0/1:20,0:20:99:178,0,126	1/1:14,0:14:4.16:190,4,0	0/1:21,0:21:48.81:49,0,258	1/1:20,0:20:9.50:145,9,0	1/1:13,1:14:22.02:99,22,0	0/0:25,0:25:72.21:0,72,1274	0/0:29,0:29:87.10:0,87,1382	0/1:17,0:17:44.05:44,0,173	0/0:33,0:33:99:0,99,1608	0/0:25,0:25:71.24:0,71,1227	0/1:8,0:8:15.01:15,0,22	0/1:5,0:5:11.35:11,0,44	0/1:12,0:12:0.40:77,0,0	1/1:18,1:19:13.84:156,14,0	1/1:32,2:34:9.43:201,9,0	0/0:13,0:13:36.09:0,36,576	0/0:19,0:19:57.15:0,57,945	0/0:21,0:21:63.09:0,63,1053	0/1:13,0:13:4.60:5,0,107	1/1:16,1:16:36.11:215,36,0	1/1:28,1:29:54.59:233,55,0	1/1:17,1:18:35.45:149,35,0
chr10	53595145	.	GC	G	6243.97	PASS	AB=0.899;AC=28;AF=0.500;AN=56;BaseQRankSum=1.448;DP=538;FS=3.359;HRun=2;HaplotypeScore=64.6890;InbreedingCoeff=0.5686;MQ=76.63;MQ0=0;MQRankSum=-1.883;QD=21.76;ReadPosRankSum=-2.249;VQSLOD=4.2126;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:84.12:0,84,1034	0/0:10,0:10:21.48:0,21,297	0/0:24,0:21:29.40:0,29,305	0/0:22,0:20:23.22:0,23,382	0/1:12,1:13:28.44:78,0,28	0/1:11,0:11:3.04:86,0,3	0/1:20,1:21:6.42:280,0,6	1/1:15,0:15:38.86:316,39,0	0/1:20,1:21:47.52:97,0,48	1/1:1,19:20:57.01:622,57,0	1/1:1,13:14:39:462,39,0	0/0:25,0:25:72.20:0,72,945	0/0:30,0:30:82.19:0,82,1012	0/1:18,2:20:30:160,0,30	0/0:33,0:33:89.58:0,90,1121	0/0:26,0:26:74.22:0,74,926	1/1:6,0:6:9.72:57,10,0	1/1:5,0:5:1.18:23,1,0	1/1:3,9:12:26.54:380,27,0	1/1:2,17:19:39.95:442,40,0	1/1:4,29:33:64.28:973,64,0	0/0:12,0:12:15.01:0,15,381	0/0:19,0:19:57.13:0,57,707	0/0:21,0:21:56.52:0,57,693	0/1:6,7:13:18.46:74,0,18	1/1:1,16:17:50.96:543,51,0	1/1:5,24:29:87.10:1028,87,0	1/1:1,17:18:51.06:621,51,0
chr10	53595858	.	CTT	C	4519.83	PASS	AB=0.750;AC=21;AF=0.375;AN=56;BaseQRankSum=6.864;DP=413;FS=22.275;HRun=10;HaplotypeScore=73.4858;InbreedingCoeff=0.7876;MQ=71.57;MQ0=0;MQRankSum=-2.489;QD=24.04;ReadPosRankSum=-0.200;VQSLOD=2.4952;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:60.18:0,60,908	0/0:3,0:3:9.03:0,9,143	0/0:14,0:12:23.71:0,24,228	0/1:6,1:7:1.96:2,0,74	0/0:2,0:23:52.28:0,52,181	0/0:3,0:25:52.40:0,52,180	0/0:3,0:13:24.95:0,25,86	1/1:6,19:25:54.07:582,54,0	0/0:1,0:8:15.15:0,15,54	1/1:1,11:12:33.09:368,33,0	1/1:1,15:16:42.11:468,42,0	0/0:14,0:14:39.13:0,39,617	0/0:6,0:7:20.56:0,21,294	0/0:1,0:15:27.45:0,27,94	0/0:12,0:12:30.05:0,30,427	0/0:11,0:12:36.12:0,36,553	0/1:0,2:15:38.39:38,0,49	0/0:1,0:16:34.93:0,35,120	1/1:1,18:19:51.09:549,51,0	1/1:2,23:25:60.14:669,60,0	1/1:0,6:6:15.04:167,15,0	0/1:6,1:7:14.80:15,0,220	0/0:13,0:13:36.11:0,36,551	0/0:10,0:10:27.09:0,27,429	0/0:2,0:18:37.92:0,38,143	1/1:3,22:25:66.15:725,66,0	1/1:2,12:14:36.08:401,36,0	1/1:1,16:17:48.13:535,48,0
chr10	53595962	.	GA	G	3829.36	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=14.648;DP=485;FS=3.354;HRun=8;HaplotypeScore=60.0712;InbreedingCoeff=0.9894;MQ=77.44;MQ0=0;MQRankSum=0.591;QD=26.59;ReadPosRankSum=0.722;VQSLOD=4.4861;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:75.23:0,75,905	0/0:10,0:10:27.08:0,27,326	0/0:11,0:11:27.05:0,27,303	0/0:16,0:16:33.94:0,34,360	0/0:19,0:19:29.81:0,30,405	0/0:18,0:18:48.14:0,48,570	0/0:22,0:22:60.17:0,60,711	1/1:1,22:23:63.09:603,63,0	0/0:11,0:11:27.08:0,27,326	1/1:1,16:17:48.07:463,48,0	1/1:1,14:15:42.07:405,42,0	0/0:22,0:22:57.13:0,57,655	0/0:15,0:15:39.12:0,39,471	0/0:16,0:16:45.14:0,45,544	0/0:23,0:23:63.17:0,63,736	0/0:12,0:12:36.11:0,36,435	0/0:30,0:31:87.12:0,87,1017	0/0:24,0:24:66.15:0,66,768	1/1:1,12:13:36.05:343,36,0	1/1:2,18:20:54.04:511,54,0	1/1:0,5:5:9.01:87,9,0	0/0:21,0:21:60.15:0,60,702	0/0:13,0:13:30.09:0,30,362	0/0:12,0:12:35.14:0,35,404	0/0:16,0:16:39.11:0,39,459	1/1:0,19:19:57.09:550,57,0	1/1:1,23:24:69.11:664,69,0	1/1:0,8:8:21.03:203,21,0
chr10	53598105	.	ACT	A	4409.42	PASS	AB=0.979;AC=26;AF=0.464;AN=56;BaseQRankSum=-5.842;DP=648;FS=6.663;HRun=0;HaplotypeScore=84.7664;InbreedingCoeff=0.4501;MQ=58.73;MQ0=13;MQRankSum=-2.165;QD=11.70;ReadPosRankSum=-2.372;VQSLOD=3.0482;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:86.89:0,87,976	0/0:7,0:7:10.24:0,10,194	0/0:40,0:18:47.10:0,47,485	0/0:35,0:19:29.60:0,30,375	1/1:16,0:16:26.90:210,27,0	0/1:23,0:22:1.44:247,0,1	0/1:25,0:25:9.20:326,0,9	1/1:24,0:23:20.66:427,21,0	1/1:16,0:16:4.23:135,4,0	0/1:16,0:16:0.81:201,0,1	1/1:13,0:12:7.35:117,7,0	0/0:25,0:25:59.68:0,60,585	0/0:20,0:21:32.24:0,32,440	1/1:12,0:12:6.37:145,6,0	0/0:27,0:27:48.64:0,49,631	0/0:24,0:24:33.52:0,34,677	1/1:37,1:37:39.22:411,39,0	0/1:23,0:23:34.78:139,0,35	1/1:19,0:17:16.83:309,17,0	0/1:21,0:21:57.78:161,0,58	0/1:57,2:58:7.21:647,0,7	0/0:11,0:11:23.98:0,24,256	0/0:10,0:10:20.82:0,21,275	0/0:34,0:34:76.96:0,77,805	0/1:16,1:17:8.36:198,0,8	1/1:21,0:21:29.15:343,29,0	1/1:22,0:22:6.20:269,6,0	0/1:11,1:11:68.98:125,0,69
chr10	53599868	.	TA	T	1434	PASS	AB=0.917;AC=13;AF=0.241;AN=54;BaseQRankSum=5.089;DP=403;FS=7.084;HRun=11;HaplotypeScore=40.9955;InbreedingCoeff=0.8219;MQ=54.00;MQ0=10;MQRankSum=2.317;QD=15.42;ReadPosRankSum=1.966;VQSLOD=3.8181;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:54.08:0,54,555	0/0:6,0:6:18:0,18,179	./.	0/0:1,0:1:3:0,3,29	1/1:2,21:22:56.92:468,57,0	1/1:3,9:11:23.97:197,24,0	1/1:0,7:7:14.98:123,15,0	0/0:21,0:18:51.10:0,51,532	1/1:1,11:12:29.95:246,30,0	0/0:16,0:16:36.08:0,36,378	0/0:15,0:14:36.04:0,36,364	0/1:10,1:11:3.59:4,0,170	0/0:10,0:10:27.07:0,27,288	1/1:2,9:12:0.02:195,0,0	0/0:8,1:8:18.05:0,18,192	0/0:11,0:11:30.07:0,30,313	0/0:5,0:28:42.77:0,43,219	0/0:5,0:22:39.87:0,40,201	0/0:25,0:24:36.93:0,37,577	0/0:18,0:18:45.10:0,45,467	0/0:4,0:4:12.02:0,12,121	0/0:8,0:7:21.05:0,21,224	0/0:6,0:6:15.04:0,15,159	0/0:6,0:6:15.03:0,15,160	1/1:0,15:16:46.99:375,47,0	0/0:24,0:23:54.13:0,54,570	0/0:26,0:26:69.14:0,69,717	0/0:18,0:17:48.11:0,48,504
chr10	53600977	.	AC	A	5281.88	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=11.389;DP=720;FS=1.024;HRun=7;HaplotypeScore=73.0361;InbreedingCoeff=0.9964;MQ=80.41;MQ0=0;MQRankSum=-1.027;QD=26.28;ReadPosRankSum=-0.393;VQSLOD=5.2901;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,117,1404	0/0:9,0:9:27.05:0,27,319	0/0:25,0:25:57.14:0,57,686	0/0:18,0:18:44.84:0,45,518	0/0:21,0:21:54.17:0,54,678	0/0:20,0:20:54.17:0,54,679	0/0:37,0:37:99:0,108,1359	1/1:1,20:21:60.14:612,60,0	0/0:30,0:30:87.26:0,87,1068	1/1:1,21:22:66.15:672,66,0	1/1:1,10:11:24.05:245,24,0	0/0:38,0:38:99:0,108,1345	0/0:22,0:22:57.18:0,57,709	0/0:28,0:28:81.26:0,81,1019	0/0:35,0:35:93.29:0,93,1158	0/0:35,0:35:99:0,105,1298	0/0:37,0:37:99:0,102,1259	0/0:25,0:25:66.21:0,66,827	1/1:4,16:20:48.09:490,48,0	1/1:1,9:10:30.07:305,30,0	1/1:3,55:58:99:1561,153,0	0/0:16,0:16:45.10:0,45,536	0/0:12,0:12:27.04:0,27,322	0/0:44,0:44:99:0,123,1547	0/0:20,1:21:23.56:0,24,611	1/1:0,16:16:45.07:450,45,0	1/1:6,27:33:78.17:795,78,0	1/1:5,5:10:15.03:153,15,0
chr10	53601760	.	G	GGTGT	2239.86	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=2.748;DP=739;FS=0.550;HRun=0;HaplotypeScore=161.2481;InbreedingCoeff=0.8824;MQ=59.56;MQ0=23;MQRankSum=-2.670;QD=12.31;ReadPosRankSum=-1.017;VQSLOD=3.2952;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:46:99:0,108,1698	0/0:16,0:15:27.16:0,27,679	0/0:58,0:23:23.71:0,24,349	0/1:62,0:31:64.83:65,0,157	1/1:16,2:17:21.07:498,21,0	1/1:16,0:16:20.10:346,20,0	1/1:18,10:28:20.85:367,21,0	0/0:25,0:24:30.08:0,30,426	1/1:20,2:22:19.31:448,19,0	0/0:26,0:26:36.12:0,36,589	0/0:15,0:14:27.04:0,27,414	0/0:18,0:18:45.15:0,45,747	0/0:33,0:31:69.22:0,69,1111	1/1:19,0:18:32.21:411,32,0	0/0:25,0:25:63.20:0,63,1027	0/0:27,0:27:57.19:0,57,947	0/0:39,0:32:46.34:0,46,658	0/0:16,0:11:18.06:0,18,305	0/0:18,0:16:16.42:0,16,318	0/0:15,0:14:24.08:0,24,399	0/0:51,0:46:23.58:0,24,596	0/0:13,0:12:30.10:0,30,497	0/0:15,0:16:20.83:0,21,651	0/0:36,0:36:92.92:0,93,1394	1/1:16,0:16:17.61:294,18,0	0/0:31,0:29:63.19:0,63,919	0/0:21,0:21:45.10:0,45,702	0/0:7,0:7:12.04:0,12,183
chr10	53601775	.	GTGA	G	1335.22	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=7.016;DP=760;FS=4.692;HRun=0;HaplotypeScore=160.5914;InbreedingCoeff=0.5689;MQ=49.21;MQ0=34;MQRankSum=-2.650;QD=3.83;ReadPosRankSum=-1.966;VQSLOD=2.3839;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:49:99:0,131,2394	0/0:17,0:16:44.89:0,45,874	0/1:76,0:16:81.83:82,0,399	0/1:74,0:13:73.60:74,0,237	1/1:20,0:19:19.98:165,20,0	1/1:12,1:14:19.85:201,20,0	1/1:22,1:22:24.43:246,24,0	0/0:21,0:20:55.98:0,56,780	1/1:15,0:15:12.09:158,12,0	0/0:21,0:20:45.13:0,45,741	0/0:14,0:13:26.88:0,27,512	0/0:22,0:21:50.10:0,50,889	0/0:30,0:28:75.25:0,75,1341	1/1:18,3:20:35.32:337,35,0	0/0:26,0:26:75.12:0,75,1408	0/0:22,0:22:66.22:0,66,1244	0/0:35,0:28:15.84:0,16,672	0/1:16,0:11:32.79:33,0,241	0/1:20,0:19:30.43:30,0,553	0/0:13,0:12:26.92:0,27,483	0/1:52,0:44:11.94:12,0,613	0/0:16,0:14:35.67:0,36,645	0/0:21,0:21:50.39:0,50,966	0/0:39,0:38:99:0,103,1798	1/1:15,1:15:17.46:191,17,0	0/0:35,0:32:77.53:0,78,1177	0/0:18,0:18:52.05:0,52,892	0/0:10,0:10:18:0,18,246
chr10	53601777	.	GA	G	1442.13	PASS	AB=0.901;AC=17;AF=0.304;AN=56;BaseQRankSum=7.211;DP=765;FS=6.489;HRun=1;HaplotypeScore=141.6423;InbreedingCoeff=0.5678;MQ=48.71;MQ0=40;MQRankSum=-3.256;QD=4.03;ReadPosRankSum=-2.425;VQSLOD=-0.6925;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:49:99:0,131,1944	0/0:17,0:16:44.98:0,45,680	0/1:75,6:16:81.84:82,0,380	0/1:69,12:13:73.18:73,0,217	1/1:8,11:18:19.71:164,20,0	1/1:5,8:13:21.03:224,21,0	1/1:13,9:21:24.52:275,25,0	0/0:20,0:20:55.77:0,56,754	1/1:9,6:15:13.51:161,14,0	0/0:21,0:20:45.09:0,45,624	0/0:13,0:12:26.88:0,27,390	0/0:21,0:20:53.07:0,53,765	0/0:27,1:26:75.22:0,75,1126	1/1:9,12:20:35.94:369,36,0	0/0:26,0:26:75.24:0,75,1140	0/0:22,0:22:66.22:0,66,1003	0/0:33,2:28:10.83:0,11,618	0/1:13,4:12:37.50:38,0,261	0/1:19,2:19:32.43:32,0,481	0/0:12,0:11:26.92:0,27,359	0/1:51,1:44:11.24:11,0,507	0/0:15,0:13:35.76:0,36,544	0/0:22,0:22:54.05:0,54,785	0/0:40,0:39:68.32:0,68,1459	1/1:6,10:15:17.59:207,18,0	0/0:34,2:32:62.08:0,62,910	0/0:18,0:18:51.15:0,51,727	0/0:10,0:10:18:0,18,229
chr10	53601782	.	G	GA	1211.31	PASS	AB=0.706;AC=11;AF=0.196;AN=56;BaseQRankSum=8.017;DP=779;FS=0.000;HRun=0;HaplotypeScore=150.1666;InbreedingCoeff=0.8495;MQ=45.21;MQ0=45;MQRankSum=-1.726;QD=10.91;ReadPosRankSum=-1.960;VQSLOD=3.5280;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:47:99:0,128,1704	0/0:16,0:15:45.03:0,45,585	0/0:90,0:12:36.06:0,36,435	0/0:91,0:9:3.39:0,3,201	1/1:14,7:21:20.31:181,20,0	1/1:5,9:14:20.83:265,21,0	1/1:17,8:22:22.51:215,23,0	0/0:21,0:20:56.39:0,56,678	0/1:7,5:12:12.76:148,0,13	0/0:20,0:18:42.14:0,42,567	0/0:14,0:13:27.08:0,27,354	0/0:20,0:19:48.44:0,48,651	0/0:27,0:25:72.20:0,72,977	1/1:8,11:20:35.41:364,35,0	0/0:26,0:26:75.18:0,75,1015	0/0:21,0:21:63.21:0,63,878	0/0:34,0:27:47.88:0,48,516	0/0:18,0:13:32.74:0,33,353	0/0:20,0:18:51.11:0,51,633	0/0:13,0:12:30.07:0,30,369	0/0:50,0:42:36.17:0,36,498	0/0:16,0:14:39.02:0,39,518	0/0:20,0:20:50.92:0,51,686	0/0:43,0:42:99:0,111,1411	1/1:7,9:15:18.04:214,18,0	0/0:32,0:29:77.06:0,77,1010	0/0:18,0:18:51.13:0,51,666	0/0:8,0:8:12.04:0,12,153
chr10	53601784	.	G	GA	594.88	PASS	AB=1.000;AC=10;AF=0.179;AN=56;BaseQRankSum=7.598;DP=791;FS=4.458;HRun=0;HaplotypeScore=156.1149;InbreedingCoeff=0.7483;MQ=44.14;MQ0=46;MQRankSum=-2.496;QD=5.36;ReadPosRankSum=-0.506;VQSLOD=3.4413;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:50:99:0,132,1734	0/0:17,0:16:45.04:0,45,590	0/0:90,0:12:33.08:0,33,414	0/0:91,0:9:18.31:0,18,209	1/1:23,0:21:11.81:93,12,0	0/1:14,0:14:0.31:109,0,0	1/1:24,1:22:2.68:120,3,0	0/0:21,0:20:56.86:0,57,718	0/1:12,0:12:20.36:76,0,20	0/0:21,0:19:42.14:0,42,566	0/0:14,0:13:27.07:0,27,347	0/0:20,0:19:56.79:0,57,690	0/0:26,0:24:69.19:0,69,919	1/1:19,2:20:25.25:221,25,0	0/0:26,0:26:69.16:0,69,934	0/0:21,0:21:63.21:0,63,878	0/0:34,0:27:44.87:0,45,492	0/0:18,0:13:32.88:0,33,376	0/0:21,0:18:47.89:0,48,611	0/0:13,0:12:30.09:0,30,393	0/0:49,0:41:35.91:0,36,438	0/0:17,0:15:39.02:0,39,518	0/0:21,0:21:50.92:0,51,686	0/0:43,0:42:99:0,117,1472	1/1:14,1:15:10.72:132,11,0	0/0:34,0:29:77.27:0,77,994	0/0:20,0:20:53.18:0,53,683	0/0:8,0:8:12.04:0,12,158
chr10	53601804	.	GA	G	3195.10	PASS	AB=0.772;AC=29;AF=0.518;AN=56;BaseQRankSum=10.967;DP=711;FS=3.711;HRun=1;HaplotypeScore=140.1827;InbreedingCoeff=0.5551;MQ=41.95;MQ0=50;MQRankSum=-8.442;QD=8.23;ReadPosRankSum=-0.068;VQSLOD=0.9071;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,132,2015	0/0:14,0:14:41.97:0,42,606	0/1:93,2:10:17.28:17,0,251	0/0:88,3:6:15.05:0,15,211	0/0:11,5:16:0.93:0,1,1	1/1:8,6:14:11.78:93,12,0	1/1:13,9:19:1.07:156,1,0	0/1:15,4:17:99:155,0,100	1/1:5,5:10:8.98:122,9,0	0/1:6,9:16:53.58:338,0,54	1/1:2,8:12:17.89:188,18,0	0/0:17,1:18:52.34:0,52,747	0/0:21,0:20:57.12:0,57,827	1/1:19,2:19:5.44:216,5,0	0/0:20,0:20:57.06:0,57,867	0/0:18,0:18:51.65:0,52,811	0/1:23,8:26:99:157,0,135	0/1:5,9:9:1.89:64,0,2	1/1:6,6:9:20.76:266,21,0	1/1:6,5:13:22.20:215,22,0	1/1:7,20:30:15.20:136,15,0	0/0:17,0:15:38.84:0,39,615	0/0:19,0:19:48.12:0,48,732	0/0:40,0:40:99:0,102,1508	1/1:11,7:18:4.25:188,4,0	1/1:9,13:23:59.82:618,60,0	1/1:1,10:15:35.98:390,36,0	1/1:0,3:7:8.99:76,9,0
chr10	53601805	.	ATGTGATG	A	3689.07	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=6.781;DP=715;FS=5.996;HRun=0;HaplotypeScore=186.5968;InbreedingCoeff=0.2811;MQ=41.78;MQ0=50;MQRankSum=-8.410;QD=13.56;ReadPosRankSum=-3.285;VQSLOD=1.8880;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,129,3602	0/0:14,0:14:39.13:0,39,1064	0/0:94,0:10:23.88:0,24,482	0/0:91,0:7:11.58:0,12,246	0/0:15,3:16:0.45:0,0,1	1/1:12,2:14:12.04:263,12,0	1/1:22,2:21:27.55:499,28,0	0/1:20,0:18:99:616,0,101	1/1:9,1:10:11.47:230,11,0	0/1:18,0:16:99:131,0,216	0/0:13,0:12:11.94:0,12,132	0/0:18,0:18:54.18:0,54,1424	0/0:21,0:20:48.15:0,48,1275	1/1:12,9:19:29.89:677,30,0	0/0:19,0:19:51.16:0,51,1396	0/0:19,0:19:51.65:0,52,1352	0/1:32,0:26:99:314,0,109	0/1:14,0:9:96.42:120,0,96	0/1:13,0:10:45.92:46,0,83	0/0:10,0:12:8.16:0,8,58	0/1:40,0:34:3.34:3,0,29	0/0:17,0:15:38.69:0,39,1003	0/0:19,0:19:48.05:0,48,1393	0/0:38,0:39:96.22:0,96,2874	1/1:17,1:18:17.90:413,18,0	0/1:27,0:22:99:228,0,161	0/1:15,0:15:99:124,0,114	0/1:6,0:6:6.35:26,0,6
chr10	53601807	.	GTGA	G	2251.26	PASS	AB=0.939;AC=23;AF=0.411;AN=56;BaseQRankSum=11.131;DP=703;FS=21.224;HRun=0;HaplotypeScore=159.2005;InbreedingCoeff=0.4766;MQ=41.89;MQ0=49;MQRankSum=-9.871;QD=7.79;ReadPosRankSum=-0.503;VQSLOD=1.4418;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,129,2498	0/0:14,0:14:39.13:0,39,742	0/0:91,0:9:21.54:0,22,380	0/0:86,0:7:11.27:0,11,197	0/1:17,0:15:0.02:0,0,0	1/1:14,0:14:12.04:159,12,0	1/1:24,0:21:18.02:242,18,0	0/1:22,0:20:62.71:420,0,63	1/1:10,0:10:11.95:103,12,0	0/1:15,2:15:85.73:86,0,138	0/0:11,1:11:11.89:0,12,103	0/0:18,0:18:54.18:0,54,1003	0/0:20,0:19:47.91:0,48,855	1/1:23,0:21:13.96:267,14,0	0/0:19,0:19:50.95:0,51,939	0/0:19,0:19:51.64:0,52,942	1/1:31,0:25:26.37:395,26,0	1/1:14,0:9:4.23:149,4,0	0/1:11,1:9:20.31:56,0,20	0/0:10,1:10:2.37:0,2,52	0/1:39,1:34:2.73:3,0,29	0/0:17,0:16:41.66:0,42,744	0/0:19,0:19:47.98:0,48,931	0/0:39,0:39:96.22:0,96,1980	1/1:18,0:18:17.85:180,18,0	0/1:21,5:21:23.24:232,0,23	0/1:15,1:16:41.92:78,0,42	1/1:2,3:5:9.45:74,9,0
chr10	53601810	.	ATG	A	1462.46	PASS	AB=0.892;AC=27;AF=0.500;AN=54;BaseQRankSum=8.288;DP=687;FS=10.519;HRun=0;HaplotypeScore=153.4672;InbreedingCoeff=0.4607;MQ=42.12;MQ0=47;MQRankSum=-5.217;QD=4.83;ReadPosRankSum=-2.292;VQSLOD=2.2664;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:78.25:0,78,1186	0/0:13,0:13:21.07:0,21,319	0/0:86,0:9:15.04:0,15,208	0/0:84,0:7:12.03:0,12,149	0/1:13,4:15:0.01:0,0,0	1/1:9,5:14:8.99:83,9,0	1/1:15,8:20:8.43:212,8,0	0/1:18,4:21:18.41:207,0,18	1/1:8,2:10:4.06:127,4,0	0/1:12,0:13:12.37:67,0,12	./.	0/0:18,0:18:36.05:0,36,535	0/1:16,2:17:5.09:5,0,371	1/1:21,2:21:32.80:323,33,0	0/1:17,0:17:2.03:2,0,404	0/0:18,0:18:24.08:0,24,374	0/0:30,0:24:7.24:0,7,114	0/0:15,0:10:8.97:0,9,73	0/1:10,0:8:17.96:48,0,18	1/1:10,0:10:4.81:27,5,0	1/1:32,0:35:2.35:9,2,0	0/1:17,0:16:30.84:31,0,334	0/0:20,0:20:27.08:0,27,374	0/0:37,0:38:72.23:0,72,1104	1/1:13,4:18:20.34:206,20,0	1/1:24,0:22:38.32:155,38,0	1/1:11,0:17:21.87:102,22,0	1/1:4,0:4:8.42:43,8,0
chr10	53601812	.	G	GA	80.16	PASS	AB=0.944;AC=6;AF=0.107;AN=56;BaseQRankSum=2.424;DP=691;FS=5.943;HRun=0;HaplotypeScore=152.7376;InbreedingCoeff=0.2684;MQ=42.30;MQ0=48;MQRankSum=0.731;QD=0.83;ReadPosRankSum=-2.320;VQSLOD=2.0089;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,123,1687	0/0:13,0:13:39.13:0,39,539	0/0:90,0:10:27.09:0,27,367	0/0:82,0:7:18.06:0,18,243	0/1:17,0:16:0.33:1,0,0	0/0:13,1:14:1.02:0,1,20	0/1:24,0:21:37.80:38,0,70	0/0:22,0:21:8.34:0,8,286	1/1:7,3:10:8.89:52,9,0	0/0:15,0:13:29.21:0,29,236	0/0:12,0:11:11.81:0,12,99	0/0:20,0:20:57.17:0,57,772	0/0:17,0:16:44.92:0,45,579	0/1:23,1:22:27.35:74,0,27	0/0:16,0:16:47.95:0,48,635	0/0:18,0:18:51.64:0,52,703	0/0:30,0:24:45.86:0,46,384	0/0:15,0:10:18.32:0,18,163	0/0:12,0:8:18.80:0,19,149	0/0:11,0:10:11.76:0,12,79	0/0:39,0:35:11.39:0,11,65	0/0:16,0:15:38.87:0,39,494	0/0:20,0:20:48.02:0,48,664	0/0:38,0:38:96.28:0,96,1313	0/1:17,3:20:19.36:32,0,19	0/0:26,0:22:57.51:0,58,353	0/0:17,0:17:36.39:0,36,220	0/0:4,0:4:4.96:0,5,14
chr10	53601814	.	G	GA	537.74	PASS	AB=0.861;AC=10;AF=0.179;AN=56;BaseQRankSum=4.929;DP=695;FS=6.105;HRun=0;HaplotypeScore=151.5482;InbreedingCoeff=-0.0250;MQ=42.56;MQ0=49;MQRankSum=-3.983;QD=3.18;ReadPosRankSum=1.163;VQSLOD=2.8517;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,129,1776	0/0:13,0:13:39.13:0,39,542	0/0:90,0:12:30.08:0,30,387	0/0:82,1:8:18.01:0,18,231	0/0:19,0:17:2.02:0,2,22	0/0:14,0:14:11.10:0,11,74	0/0:23,1:21:30.82:0,31,237	0/1:20,2:21:37.94:38,0,432	0/0:10,0:10:14.29:0,14,79	0/1:13,2:13:59.09:59,0,162	0/1:11,2:12:9.93:10,0,120	0/0:19,0:19:57.19:0,57,792	0/0:16,0:15:41.93:0,42,534	0/0:24,0:22:38.34:0,38,241	0/0:17,0:17:51.04:0,51,666	0/0:16,0:16:45.60:0,46,608	0/0:30,0:24:49.36:0,49,558	0/0:16,0:11:21.07:0,21,271	0/1:13,1:10:37.46:74,0,37	0/0:10,1:10:3.98:0,4,64	0/1:25,14:35:19.35:19,0,59	0/0:16,0:15:38.94:0,39,480	0/0:20,0:20:51.03:0,51,703	0/0:37,1:38:93.31:0,93,1297	0/1:17,1:18:17.67:18,0,142	0/1:16,11:23:99:229,0,144	0/1:15,2:17:94.43:143,0,94	1/1:1,3:4:9:93,9,0
chr10	53601923	.	C	CAA	6276.89	PASS	AB=1.000;AC=31;AF=0.554;AN=56;BaseQRankSum=-0.809;DP=533;FS=9.844;HRun=10;HaplotypeScore=72.3805;InbreedingCoeff=0.8691;MQ=67.20;MQ0=0;MQRankSum=-4.138;QD=19.86;ReadPosRankSum=-0.735;VQSLOD=2.8869;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:69.11:0,69,693	0/0:8,0:9:20.63:0,21,179	0/0:15,0:14:0.57:0,1,161	0/1:12,0:11:5.11:5,0,103	1/1:5,1:20:35.80:168,36,0	1/1:1,0:16:9.92:101,10,0	1/1:3,0:15:24.95:88,25,0	1/1:3,22:28:67.90:882,68,0	1/1:5,0:20:35.29:134,35,0	1/1:7,14:24:53.61:702,54,0	1/1:5,16:21:39.05:525,39,0	0/0:15,0:16:1.35:0,1,172	0/0:27,0:28:71.88:0,72,713	1/1:1,0:13:18.71:64,19,0	0/0:30,0:30:75.11:0,75,751	0/0:24,0:24:57.07:0,57,566	0/0:11,0:11:27.05:0,27,275	0/0:15,0:14:36.07:0,36,365	1/1:6,8:16:29.56:373,30,0	1/1:1,5:7:17.45:162,17,0	1/1:5,12:17:30.10:447,30,0	0/0:17,0:17:45.09:0,45,457	0/0:8,0:8:21.04:0,21,214	0/0:17,0:17:39.03:0,39,397	1/1:5,0:29:49.91:176,50,0	1/1:3,23:27:68.82:1012,69,0	1/1:7,24:34:59.09:803,59,0	1/1:0,14:15:44.64:635,45,0
chr10	53603324	.	GGT	G	154.30	PASS	AB=0.936;AC=10;AF=0.192;AN=52;BaseQRankSum=1.913;DP=636;FS=0.000;HRun=0;HaplotypeScore=92.8003;InbreedingCoeff=-0.0471;MQ=66.23;MQ0=9;MQRankSum=1.028;QD=0.92;ReadPosRankSum=-0.207;VQSLOD=1.4221;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:17.78:0,18,211	0/1:6,2:8:20.11:20,0,119	./.	./.	0/0:22,0:22:14.70:0,15,320	0/0:28,0:28:9.03:0,9,129	0/0:29,1:30:3.91:0,4,405	0/0:27,0:27:3.01:0,3,36	0/1:22,0:22:13.98:14,0,140	0/0:23,0:22:17.98:0,18,167	0/0:11,0:16:15.01:0,15,157	0/1:25,0:27:23.40:23,0,203	0/0:21,0:21:19.60:0,20,262	1/1:13,3:16:15.04:161,15,0	0/1:18,0:18:11.07:11,0,241	0/1:13,3:16:40.24:40,0,222	0/1:26,1:28:5.33:5,0,180	0/0:19,0:19:14.87:0,15,112	0/0:17,0:19:8.99:0,9,88	0/0:15,0:17:3:0,3,26	0/0:22,0:28:6.01:0,6,70	0/1:19,2:20:11.03:11,0,183	0/0:14,0:19:14.95:0,15,162	0/0:29,0:38:24.03:0,24,267	0/1:12,0:12:2.15:2,0,194	0/0:26,0:26:24.01:0,24,263	0/0:17,0:27:20.63:0,21,203	0/0:6,0:9:3:0,3,26
chr10	53603369	.	G	GTGTA	834.03	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=3.952;DP=623;FS=0.791;HRun=0;HaplotypeScore=129.3752;InbreedingCoeff=0.2114;MQ=66.37;MQ0=10;MQRankSum=-2.159;QD=5.79;ReadPosRankSum=1.964;VQSLOD=2.1683;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:41:86.69:0,87,779	0/0:6,0:6:11.87:0,12,176	0/0:38,0:20:50.90:0,51,469	0/0:31,0:18:37.69:0,38,390	0/0:26,0:26:64.13:0,64,726	0/0:16,0:16:35.97:0,36,358	0/0:30,0:29:71.71:0,72,881	0/0:17,0:17:41.70:0,42,334	0/0:18,0:18:35.72:0,36,351	0/0:14,0:14:0.73:0,1,165	0/0:20,0:20:40.24:0,40,343	0/0:35,0:35:70.15:0,70,753	0/0:14,0:14:42.03:0,42,565	0/0:17,0:17:33.12:0,33,352	0/0:19,0:19:45:0,45,537	0/0:22,0:22:54.88:0,55,597	1/1:9,19:29:1.57:417,2,0	1/1:6,12:18:12.93:320,13,0	0/1:16,0:15:28.89:29,0,268	0/1:8,0:8:37.98:38,0,57	0/1:26,0:25:7.04:7,0,283	0/0:33,0:33:86.80:0,87,773	0/0:20,0:20:27.41:0,27,247	0/0:42,0:41:68.45:0,68,624	0/0:14,0:14:36.01:0,36,431	0/1:25,0:24:45.55:46,0,375	0/1:22,0:22:99:115,0,152	0/0:5,0:5:6.42:0,6,43
chr10	53603714	.	GA	G	1901.74	PASS	AB=0.977;AC=14;AF=0.250;AN=56;BaseQRankSum=-3.737;DP=620;FS=11.514;HRun=12;HaplotypeScore=99.8670;InbreedingCoeff=0.8524;MQ=63.12;MQ0=2;MQRankSum=2.449;QD=11.46;ReadPosRankSum=2.619;VQSLOD=2.1789;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:54,2:55:60.56:0,61,1067	0/0:4,0:4:12.02:0,12,122	0/1:20,1:12:16.31:16,0,115	0/1:16,0:8:0.07:1,0,0	1/1:4,18:23:49.83:375,50,0	1/1:5,12:18:33.93:260,34,0	1/1:6,26:32:32.47:434,32,0	0/0:11,0:35:68.54:0,69,356	1/1:1,14:15:32.86:255,33,0	0/0:5,0:28:49.15:0,49,271	0/0:6,0:14:32.29:0,32,186	0/0:13,0:13:32.41:0,32,300	0/0:16,2:18:24.86:0,25,433	1/1:1,19:21:58.82:447,59,0	0/0:25,0:25:12.02:0,12,494	0/0:15,0:15:37.31:0,37,363	0/0:4,0:29:65.49:0,65,338	0/0:7,0:32:65.70:0,66,361	0/0:10,0:20:46.38:0,46,249	0/0:10,0:18:33.48:0,33,171	0/0:4,0:14:22.84:0,23,120	0/0:25,0:25:60.35:0,60,575	0/0:17,0:19:24.71:0,25,409	0/0:30,0:30:75.15:0,75,761	1/1:3,17:20:38.84:302,39,0	0/0:10,0:33:57.27:0,57,296	0/0:4,0:15:11.36:0,11,57	0/0:4,0:10:14.24:0,14,72
chr10	53604066	.	ATTTG	A	1461.35	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.692;DP=725;FS=0.667;HRun=0;HaplotypeScore=133.2881;InbreedingCoeff=0.9826;MQ=69.62;MQ0=2;MQRankSum=-0.162;QD=25.64;ReadPosRankSum=1.912;VQSLOD=3.6902;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:60,0:60:99:0,146,3464	0/0:17,0:16:45.15:0,45,1050	0/0:31,0:24:30.10:0,30,613	0/0:22,0:18:20.90:0,21,343	0/0:26,0:26:69.23:0,69,1561	0/0:17,0:17:33.11:0,33,805	0/0:18,0:18:39.13:0,39,858	0/0:32,0:31:51.17:0,51,1168	0/0:27,0:27:66.23:0,66,1524	0/0:23,0:23:60.20:0,60,1395	0/0:18,0:18:51.09:0,51,1067	0/0:21,0:21:42.14:0,42,1003	0/0:31,0:31:84.29:0,84,2021	0/0:18,0:18:36.09:0,36,781	0/0:32,0:32:84.29:0,84,1936	0/0:30,0:30:78.25:0,78,1828	1/1:6,30:36:66.23:1099,66,0	1/1:5,16:21:13.14:480,13,0	0/0:30,0:30:57.19:0,57,1117	0/0:26,0:26:72.25:0,72,1654	0/0:25,0:25:51.16:0,51,1134	0/0:18,0:18:45.15:0,45,1058	0/0:22,0:22:48.16:0,48,1136	0/0:36,0:36:78.03:0,78,1754	0/0:23,0:23:51.17:0,51,1176	0/0:28,0:28:60.21:0,60,1466	0/0:21,0:21:39.13:0,39,921	0/0:15,0:15:21.05:0,21,428
chr10	53605573	.	T	TGTGT	1487.22	PASS	AB=1.000;AC=30;AF=0.600;AN=50;BaseQRankSum=-0.127;DP=659;FS=0.790;HRun=0;HaplotypeScore=140.9274;InbreedingCoeff=0.4193;MQ=60.17;MQ0=12;MQRankSum=-0.175;QD=3.77;ReadPosRankSum=-2.498;VQSLOD=2.2770;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:35,0:35:18.41:18,0,60	0/0:10,0:9:9.02:0,9,117	./.	./.	1/1:22,0:22:1.79:10,2,0	0/1:20,0:19:11.79:31,0,12	1/1:25,0:24:4.50:33,4,0	1/1:21,0:20:2.49:6,2,0	1/1:16,0:16:11.01:118,11,0	1/1:12,4:16:20.28:236,20,0	1/1:16,0:16:8.97:93,9,0	1/1:21,0:20:14.73:111,15,0	0/1:21,0:21:22.62:23,0,40	0/0:29,0:28:6.01:0,6,74	0/0:26,0:25:6.01:0,6,89	0/0:20,0:20:12.02:0,12,161	0/0:30,0:28:2.89:0,3,19	0/0:16,0:16:5.04:0,5,34	1/1:14,0:12:5.59:26,6,0	1/1:26,0:26:3.01:70,3,0	1/1:42,0:40:29.27:283,29,0	0/0:22,0:22:11.46:0,11,147	./.	0/0:31,0:31:26.83:0,27,353	0/1:35,0:35:18.09:18,0,153	1/1:31,0:28:25.02:316,25,0	1/1:21,0:21:15.03:199,15,0	1/1:12,0:9:6:66,6,0
chr10	53606701	.	G	GAA	2976.87	PASS	AB=0.624;AC=28;AF=0.519;AN=54;BaseQRankSum=-0.209;DP=364;FS=25.303;HRun=11;HaplotypeScore=56.6315;InbreedingCoeff=0.8050;MQ=67.27;MQ0=0;MQRankSum=-2.297;QD=14.81;ReadPosRankSum=-3.092;VQSLOD=-0.3086;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:37:90.70:0,91,895	0/0:2,0:2:6.01:0,6,58	0/0:15,0:12:11.59:0,12,114	0/0:7,0:7:11.89:0,12,94	0/1:7,0:16:4.34:91,0,4	1/1:3,1:11:18.45:106,18,0	1/1:2,1:17:9.86:143,10,0	1/1:4,1:13:21.44:193,21,0	1/1:1,0:14:17.26:60,17,0	1/1:7,9:17:24.05:296,24,0	1/1:2,9:11:17.79:229,18,0	0/0:14,0:14:36.01:0,36,341	0/0:4,0:5:5.97:0,6,108	0/1:5,0:14:3.29:62,0,3	0/0:14,0:15:26.97:0,27,311	0/0:13,0:13:30.03:0,30,290	0/0:20,0:22:38.91:0,39,471	0/0:14,0:18:37.34:0,37,352	1/1:5,9:16:35.54:413,36,0	1/1:1,4:6:9.03:130,9,0	1/1:0,10:10:18.06:261,18,0	./.	0/0:8,0:8:20.99:0,21,198	0/0:5,0:6:2.88:0,3,79	1/1:3,0:10:15.45:64,15,0	1/1:1,16:17:42:513,42,0	1/1:5,16:21:28.45:394,28,0	1/1:1,5:8:18.05:230,18,0
chr10	53607164	.	G	GT	810.94	PASS	AC=16;AF=0.889;AN=18;BaseQRankSum=1.239;DP=150;FS=0.000;HRun=1;HaplotypeScore=26.8437;MQ=11.17;MQ0=127;MQRankSum=0.743;QD=26.16;ReadPosRankSum=0.908;VQSLOD=3.2540;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	1/1:0,1:1:3.01:46,3,0	./.	./.	1/1:0,4:4:6.51:116,7,0	./.	./.	./.	./.	1/1:3,1:1:3.01:48,3,0	1/1:0,7:6:18.06:285,18,0	./.	./.	./.	./.	./.	./.	./.	./.	1/1:1,3:4:12.04:174,12,0	./.	./.	1/1:0,2:2:6.02:72,6,0	./.	0/0:0,1:1:0:0,0,0	1/1:4,2:2:6.02:95,6,0	./.	1/1:2,1:1:3.01:47,3,0
chr10	53608146	.	C	CAT	1017.04	PASS	AB=0.985;AC=9;AF=0.161;AN=56;BaseQRankSum=7.498;DP=479;FS=2.369;HRun=0;HaplotypeScore=160.3601;InbreedingCoeff=0.2272;MQ=31.52;MQ0=8;MQRankSum=-4.039;QD=5.81;ReadPosRankSum=1.914;VQSLOD=3.0169;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:24.04:0,24,273	0/0:14,0:11:20.95:0,21,215	0/0:15,0:2:6.02:0,6,86	0/0:13,0:4:12.04:0,12,166	0/0:16,0:16:2.95:0,3,43	0/0:17,0:16:17.63:0,18,148	0/0:18,0:18:17.91:0,18,173	0/0:14,0:11:28.16:0,28,316	0/0:13,0:14:17.67:0,18,170	0/1:34,0:34:99:301,0,197	1/1:22,0:21:2.43:39,2,0	0/0:11,0:11:17.33:0,17,186	0/0:8,0:8:2.88:0,3,69	0/0:12,0:12:14.63:0,15,134	0/0:19,0:18:15.03:0,15,173	0/0:14,0:13:22.75:0,23,268	0/0:12,0:10:2.72:0,3,118	0/0:7,0:7:17.79:0,18,190	0/1:23,1:22:88.89:368,0,89	0/1:27,1:28:0.20:3,0,0	0/0:8,3:11:0.47:0,0,1	0/0:16,0:16:2.73:0,3,42	0/0:18,0:18:8.99:0,9,91	0/0:19,0:19:21.38:0,21,218	0/0:17,0:17:11.33:0,11,153	0/1:38,0:37:99:227,0,277	0/1:20,0:20:41.46:41,0,56	1/1:9,0:9:11.59:169,12,0
chr10	53608147	.	ATACTC	A	294.82	PASS	AB=0.924;AC=13;AF=0.232;AN=56;BaseQRankSum=6.394;DP=486;FS=2.399;HRun=0;HaplotypeScore=172.1039;InbreedingCoeff=0.1670;MQ=31.78;MQ0=8;MQRankSum=-4.776;QD=1.78;ReadPosRankSum=4.418;VQSLOD=2.1349;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:21.75:0,22,498	0/0:14,0:11:21.54:0,22,477	0/0:17,0:3:8.99:0,9,202	0/0:14,0:4:12.04:0,12,348	0/0:16,0:16:2.98:0,3,90	0/0:16,1:16:15.41:0,15,338	0/0:18,0:18:20.40:0,20,518	0/1:12,2:11:34.06:34,0,627	0/0:15,0:15:20.03:0,20,390	0/1:33,0:34:73.50:74,0,200	1/1:22,0:21:6.60:25,7,0	0/0:11,0:11:18.53:0,19,356	0/1:9,0:9:16.15:16,0,271	0/0:13,0:13:19.20:0,19,408	0/0:19,0:18:15.38:0,15,441	0/0:14,0:13:24.08:0,24,550	0/1:11,1:10:73.61:74,0,266	0/1:4,3:7:99:115,0,275	0/0:24,0:22:8.82:0,9,261	1/1:28,0:28:18.09:80,18,0	1/1:11,0:11:0.41:1,0,0	0/0:17,0:17:9.24:0,9,216	0/0:18,0:18:9.13:0,9,283	0/0:19,0:19:20.44:0,20,614	0/0:17,0:17:13.11:0,13,390	0/0:37,0:37:33.56:0,34,730	0/1:20,0:20:0.52:1,0,206	0/1:9,0:9:22.78:23,0,28
chr10	53608148	.	T	TACAC	105.91	PASS	AB=0.970;AC=12;AF=0.214;AN=56;BaseQRankSum=5.858;DP=496;FS=0.000;HRun=0;HaplotypeScore=176.4981;InbreedingCoeff=0.1386;MQ=31.83;MQ0=10;MQRankSum=-5.724;QD=0.57;ReadPosRankSum=3.294;VQSLOD=2.7136;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:23.89:0,24,322	0/0:14,0:11:21:0,21,304	0/0:19,0:3:6.02:0,6,116	0/0:16,0:4:12.04:0,12,232	0/0:13,3:16:2.69:0,3,58	0/1:18,0:16:0.32:0,0,198	0/0:18,0:18:23.86:0,24,286	0/0:14,0:11:17.12:0,17,429	0/0:15,0:15:16.80:0,17,237	0/1:34,0:35:89.71:90,0,122	1/1:22,0:21:0.63:4,1,0	0/0:11,0:11:17.31:0,17,223	0/1:8,1:9:61.40:61,0,110	0/0:13,0:13:18.10:0,18,226	0/0:19,0:18:14.12:0,14,248	0/0:14,0:13:23.24:0,23,355	0/1:12,0:10:10.75:11,0,180	0/0:7,0:7:11.63:0,12,159	0/1:25,0:22:1.01:1,0,212	1/1:28,0:28:10.50:35,10,0	0/1:11,0:11:0.22:0,0,0	0/1:15,3:18:26.40:26,0,74	0/0:15,3:18:8.28:0,8,131	0/0:20,0:20:19.73:0,20,319	0/0:17,1:18:10.41:0,10,197	0/0:38,0:37:53.93:0,54,595	0/0:20,0:20:3.57:0,4,149	0/1:9,0:9:0.27:0,0,14
chr10	53608149	.	AC	A	414.91	PASS	AB=0.806;AC=11;AF=0.196;AN=56;BaseQRankSum=8.642;DP=502;FS=2.374;HRun=1;HaplotypeScore=156.5344;InbreedingCoeff=0.2787;MQ=31.89;MQ0=10;MQRankSum=-4.479;QD=2.37;ReadPosRankSum=3.340;VQSLOD=-0.1850;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:25.21:0,25,398	0/0:13,0:11:21.54:0,22,327	0/0:19,0:3:5.99:0,6,96	0/0:19,0:5:11.91:0,12,175	0/0:15,0:16:3.01:0,3,48	0/0:18,0:16:17.82:0,18,247	0/0:18,0:18:20.83:0,21,294	0/0:14,0:11:20.15:0,20,417	0/0:15,0:15:19.30:0,19,269	0/1:25,9:35:99:194,0,323	1/1:17,5:21:6.82:32,7,0	0/0:11,0:11:17.80:0,18,275	0/0:10,0:10:12.38:0,12,186	0/0:13,0:13:19.30:0,19,273	0/0:19,0:18:15.02:0,15,238	0/0:14,0:13:23.11:0,23,363	0/0:11,0:10:8.54:0,9,189	0/1:7,0:7:5:5,0,164	0/1:18,7:22:99:136,0,285	1/1:25,2:28:12.33:37,12,0	1/1:9,2:11:2.03:4,2,0	0/0:18,0:18:11.73:0,12,167	0/0:17,0:18:9.67:0,10,145	0/0:20,0:20:24.55:0,25,369	0/0:17,0:18:15.76:0,16,238	0/1:30,8:37:62.23:62,0,711	0/0:17,2:20:25.26:0,25,229	0/1:4,5:9:14.89:87,0,15
chr10	53608152	.	C	CA	273.69	PASS	AB=0.959;AC=11;AF=0.196;AN=56;BaseQRankSum=5.612;DP=568;FS=0.000;HRun=0;HaplotypeScore=199.9229;InbreedingCoeff=0.2629;MQ=31.79;MQ0=13;MQRankSum=-5.950;QD=1.69;ReadPosRankSum=-2.958;VQSLOD=1.6415;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:24.40:0,24,244	0/0:15,0:12:20.94:0,21,225	0/0:22,0:4:8.97:0,9,99	0/0:26,0:6:14.88:0,15,175	0/0:17,1:18:9.01:0,9,123	0/0:18,0:16:17.12:0,17,195	0/0:20,0:20:23.78:0,24,291	0/1:17,0:14:62.91:63,0,324	0/0:18,0:18:20.60:0,21,229	0/1:37,1:38:99:141,0,210	1/1:25,0:24:2.78:9,3,0	0/0:11,0:12:17.88:0,18,182	0/1:10,0:10:2.36:2,0,171	0/0:16,0:16:19.11:0,19,190	0/0:16,0:18:15.46:0,15,189	0/0:14,0:15:21.36:0,21,224	0/1:13,0:12:85.69:86,0,133	0/1:7,0:8:64.69:72,0,65	0/0:32,0:29:21.82:0,22,180	1/1:36,1:36:10.14:30,10,0	1/1:13,0:13:1.95:4,2,0	0/0:16,2:19:10.54:0,11,145	0/0:18,0:18:9.44:0,9,125	0/0:22,0:21:24.51:0,25,334	0/0:19,0:19:15.64:0,16,210	0/0:41,0:40:45.76:0,46,338	0/0:20,0:20:13.23:0,13,159	0/0:9,0:9:7.15:0,7,20
chr10	53608155	.	CA	C	303.14	PASS	AB=0.788;AC=8;AF=0.143;AN=56;BaseQRankSum=8.920;DP=604;FS=6.457;HRun=1;HaplotypeScore=169.6330;InbreedingCoeff=0.2182;MQ=31.68;MQ0=17;MQRankSum=-6.767;QD=1.56;ReadPosRankSum=3.104;VQSLOD=-0.7652;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:13.97:0,14,198	0/0:15,0:12:12.51:0,13,176	0/0:28,0:4:12.04:0,12,159	0/0:39,0:8:20.65:0,21,247	0/0:18,0:18:9.03:0,9,134	0/0:19,0:17:21.53:0,22,247	0/0:20,0:20:23.79:0,24,352	0/0:17,0:14:39.09:0,39,518	0/0:18,0:18:18.75:0,19,218	0/1:32,8:40:99:149,0,553	1/1:22,5:26:4.39:24,4,0	0/0:12,0:12:6.82:0,7,124	0/0:11,0:11:11.41:0,11,195	0/0:17,0:17:20.91:0,21,250	0/0:19,0:18:11.46:0,11,190	0/0:17,0:16:15.86:0,16,213	0/0:15,0:13:26.84:0,27,257	0/0:9,0:9:23.94:0,24,246	0/1:29,7:32:99:120,0,369	1/1:39,1:39:5.26:16,5,0	0/0:11,2:13:1.11:0,1,43	0/0:18,1:19:12.60:0,13,156	0/0:18,0:18:8.90:0,9,144	0/0:22,0:21:30.37:0,30,470	0/0:20,0:20:15.12:0,15,240	0/1:34,8:41:43.36:43,0,920	0/0:18,2:20:20.36:0,20,354	0/1:4,5:9:28.83:80,0,29
chr10	53608163	.	CA	C	2428.78	PASS	AB=0.958;AC=12;AF=0.214;AN=56;BaseQRankSum=12.510;DP=683;FS=70.768;HRun=1;HaplotypeScore=173.9796;InbreedingCoeff=0.3937;MQ=32.11;MQ0=32;MQRankSum=-9.085;QD=9.60;ReadPosRankSum=5.708;VQSLOD=-0.5364;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:20.34:0,20,275	0/0:15,0:12:6:0,6,139	0/0:53,0:8:24.08:0,24,319	0/0:57,0:12:33.11:0,33,428	0/0:19,0:19:15.01:0,15,192	0/0:19,0:17:13.76:0,14,210	0/0:22,0:22:27.24:0,27,443	0/0:17,0:15:36.19:0,36,476	0/0:20,0:20:10.05:0,10,213	0/1:39,4:43:55.53:710,0,56	1/1:26,4:29:3.13:38,3,0	0/1:12,0:12:19.15:19,0,121	0/1:13,0:13:0.63:1,0,277	0/0:19,0:19:24.50:0,24,306	0/0:19,0:18:11.44:0,11,190	0/0:17,0:16:18.28:0,18,228	0/0:15,0:13:10.43:0,10,179	0/0:11,0:11:30.09:0,30,388	1/1:32,6:34:29.87:668,30,0	0/1:37,1:37:2.86:3,0,3	0/0:13,0:13:1.11:0,1,44	0/0:20,0:20:13.37:0,13,172	0/0:17,0:17:9.15:0,9,144	0/0:27,0:26:44.92:0,45,641	0/0:22,0:22:21.13:0,21,315	1/1:41,5:45:11.87:663,12,0	0/1:19,4:24:7.35:320,0,7	0/1:9,0:9:1.84:157,0,2
chr10	53608175	.	CA	C	3536.21	PASS	AB=0.833;AC=16;AF=0.286;AN=56;BaseQRankSum=13.078;DP=753;FS=54.943;HRun=1;HaplotypeScore=180.2843;InbreedingCoeff=0.4843;MQ=44.26;MQ0=45;MQRankSum=-10.951;QD=12.45;ReadPosRankSum=3.475;VQSLOD=0.0726;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,1:30:25.91:0,26,384	0/0:13,0:11:11.40:0,11,151	0/0:69,0:15:44.27:0,44,508	0/0:81,0:23:54.78:0,55,638	0/0:22,0:22:21.07:0,21,285	0/0:17,0:15:0.15:0,0,170	0/0:23,0:23:37.15:0,37,592	0/0:22,0:20:57.16:0,57,756	0/0:20,0:20:14.26:0,14,312	0/1:24,22:45:69.20:900,0,69	1/1:13,17:29:7.66:114,8,0	0/0:13,1:14:2.47:0,2,197	0/1:13,0:13:16.58:17,0,285	0/0:18,0:18:19.49:0,19,297	0/0:18,0:18:14.59:0,15,228	0/1:16,0:15:9.06:9,0,200	0/0:18,0:16:20.09:0,20,377	0/0:12,0:12:33.10:0,33,428	1/1:21,17:33:74.67:730,75,0	1/1:32,8:38:4.92:60,5,0	0/1:9,10:16:33.53:34,0,42	0/0:19,0:19:0.37:0,0,191	0/0:19,0:19:11.79:0,12,181	0/0:29,0:28:57.19:0,57,809	0/0:25,0:25:26.31:0,26,390	1/1:30,17:44:73.22:875,73,0	1/1:11,14:26:5.81:573,6,0	1/1:3,6:9:14.49:224,14,0
chr10	53608176	.	A	AC	3704.06	PASS	AB=0.967;AC=19;AF=0.339;AN=56;BaseQRankSum=12.640;DP=756;FS=57.219;HRun=1;HaplotypeScore=187.4042;InbreedingCoeff=0.2543;MQ=44.45;MQ0=45;MQRankSum=-10.449;QD=10.29;ReadPosRankSum=3.109;VQSLOD=-0.5251;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:30:5.65:6,0,335	0/1:11,2:11:1.24:1,0,110	0/0:69,0:15:44.26:0,44,497	0/0:81,0:23:47.63:0,48,624	0/0:18,2:21:20.86:0,21,268	0/1:16,1:15:12.09:12,0,138	0/0:25,0:25:41.54:0,42,537	0/0:22,0:20:55.94:0,56,661	0/0:21,0:21:13.30:0,13,295	0/1:46,0:45:9.61:906,0,10	1/1:29,0:29:2.01:92,2,0	0/1:14,1:15:12.60:13,0,169	0/1:13,0:13:43.37:43,0,260	0/0:18,1:19:8.73:0,9,263	0/0:18,0:18:14.24:0,14,193	0/1:16,0:15:8.11:8,0,183	0/0:18,0:16:8.15:0,8,292	0/0:12,0:12:31.34:0,31,385	1/1:38,1:34:61.28:692,61,0	0/1:37,2:37:21.67:48,0,22	0/1:19,0:16:31.98:34,0,32	0/0:18,1:19:1.12:0,1,175	0/0:18,0:18:11.43:0,11,154	0/0:28,0:27:56.62:0,57,730	0/0:23,2:25:26.03:0,26,346	1/1:47,1:45:99:1063,109,0	1/1:26,0:26:19.99:597,20,0	1/1:9,0:9:15.82:189,16,0
chr10	53608542	.	AGT	A	1815.01	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=14.961;DP=524;FS=0.000;HRun=0;HaplotypeScore=77.5938;InbreedingCoeff=0.9108;MQ=105.32;MQ0=1;MQRankSum=-4.881;QD=13.35;ReadPosRankSum=2.012;VQSLOD=3.3201;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:48.13:0,48,849	0/0:8,0:8:21.07:0,21,401	0/0:33,0:33:93.31:0,93,1717	0/0:35,0:35:97.71:0,98,1732	0/0:8,0:8:20.94:0,21,359	0/0:18,0:18:51.16:0,51,944	0/0:18,0:18:51.13:0,51,876	0/0:16,0:16:48.16:0,48,902	0/0:15,0:15:45.15:0,45,835	1/1:17,0:17:45.83:257,46,0	1/1:13,0:13:35.38:236,35,0	0/0:11,0:11:33.10:0,33,596	0/0:21,0:21:63.22:0,63,1202	0/0:21,0:21:63.22:0,63,1179	0/0:21,0:21:60.21:0,60,1146	0/0:30,0:30:87.28:0,87,1585	0/0:30,0:30:87.28:0,87,1609	0/0:14,0:14:33.11:0,33,626	1/1:13,2:15:37.07:222,37,0	1/1:8,1:9:23.36:151,23,0	0/1:20,0:19:12.85:216,0,13	0/0:12,0:12:36.12:0,36,685	0/0:10,0:10:30.10:0,30,572	0/0:33,0:33:99:0,99,1822	0/0:14,0:14:42.14:0,42,803	1/1:15,1:16:40.54:252,41,0	1/1:34,0:34:21.44:476,21,0	1/1:12,0:12:32.45:206,32,0
chr10	53608544	.	TGG	T	4909.85	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=10.404;DP=512;FS=0.000;HRun=5;HaplotypeScore=66.2773;InbreedingCoeff=0.9969;MQ=106.80;MQ0=1;MQRankSum=-1.891;QD=36.92;ReadPosRankSum=1.442;VQSLOD=4.2402;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:42.14:0,42,762	0/0:8,0:8:21.07:0,21,376	0/0:31,0:31:90.31:0,90,1647	0/0:38,0:38:99:0,102,1670	0/0:8,0:8:18.06:0,18,325	0/0:17,0:17:49.98:0,50,885	0/0:16,0:16:42.14:0,42,770	0/0:17,0:17:51.17:0,51,905	0/0:15,0:15:45.15:0,45,823	1/1:0,16:17:48.16:670,48,0	1/1:0,13:13:36.12:503,36,0	0/0:11,0:11:30.10:0,30,542	0/0:21,0:21:63.22:0,63,1142	0/0:21,0:21:63.22:0,63,1148	0/0:20,0:20:60.21:0,60,1094	0/0:29,0:29:84.27:0,84,1496	0/0:29,0:29:84.29:0,84,1540	0/0:12,0:12:33.11:0,33,604	1/1:2,13:15:45.07:555,45,0	1/1:1,7:8:20.61:293,21,0	1/1:5,15:19:45.15:629,45,0	0/0:12,0:12:36.12:0,36,652	0/0:10,0:10:30.10:0,30,540	0/0:33,0:33:96.33:0,96,1755	0/0:14,0:14:42.14:0,42,769	1/1:2,13:15:42.14:582,42,0	1/1:2,31:33:87.29:1216,87,0	1/1:0,12:12:33.11:462,33,0
chr10	53608833	.	G	GC	1607.01	PASS	AC=14;AF=0.259;AN=54;BaseQRankSum=6.020;DP=512;FS=14.124;HRun=0;HaplotypeScore=63.9963;InbreedingCoeff=0.8734;MQ=77.16;MQ0=0;MQRankSum=2.034;QD=21.72;ReadPosRankSum=-6.721;VQSLOD=1.7921;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,120,1652	0/0:7,0:7:21.04:0,21,274	0/0:29,0:27:60.46:0,60,855	0/0:19,0:15:32.52:0,33,376	0/0:20,0:20:54.18:0,54,753	0/0:18,0:18:51.15:0,51,692	0/0:23,0:23:69.22:0,69,945	0/0:23,0:23:57.18:0,57,782	0/0:25,0:25:72.24:0,72,997	1/1:3,12:15:41.75:601,42,0	1/1:2,7:9:2.55:45,3,0	0/0:18,0:18:51.17:0,51,712	0/0:20,0:20:57.17:0,57,779	0/0:23,0:23:66.22:0,66,918	0/0:22,0:22:66.22:0,66,923	0/0:15,0:15:45.15:0,45,628	0/0:26,0:26:75.25:0,75,1045	0/0:18,0:18:54.18:0,54,748	1/1:3,9:12:0.13:421,0,0	./.	1/1:3,10:13:9.03:119,9,0	0/0:22,0:22:63:0,63,847	0/0:14,0:14:42.14:0,42,578	0/0:22,0:22:66.22:0,66,921	0/0:25,0:25:75.24:0,75,1029	1/1:7,2:9:24.08:352,24,0	1/1:4,8:12:11.81:146,12,0	1/1:1,3:4:6.02:94,6,0
chr10	53609234	.	TA	T	5859.21	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=16.221;DP=590;FS=2.405;HRun=3;HaplotypeScore=71.6614;InbreedingCoeff=0.9972;MQ=78.14;MQ0=0;MQRankSum=-3.227;QD=35.51;ReadPosRankSum=0.147;VQSLOD=5.3692;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,117,1665	0/0:5,0:5:15.05:0,15,216	0/0:12,0:12:36.11:0,36,492	0/0:14,0:14:33.08:0,33,454	0/0:23,0:23:66.19:0,66,914	0/0:25,0:25:75.25:0,75,1080	0/0:18,0:18:54.18:0,54,778	0/0:29,0:29:75.25:0,75,1080	0/0:18,0:18:48.16:0,48,691	1/1:0,24:24:72.23:892,72,0	1/1:1,19:20:54.17:669,54,0	0/0:16,0:16:48.16:0,48,691	0/0:29,0:29:87.24:0,87,1211	0/0:24,0:24:69.22:0,69,975	0/0:36,0:36:99:0,102,1468	0/0:22,0:22:66.22:0,66,950	0/0:20,0:20:60.19:0,60,846	0/0:16,0:16:48.14:0,48,671	1/1:1,13:14:39.11:468,39,0	1/1:1,18:19:54.17:669,54,0	1/1:2,30:32:87.27:1078,87,0	0/0:23,0:23:66.22:0,66,950	0/0:19,0:19:57.17:0,57,801	0/0:20,0:20:57.19:0,57,821	0/0:17,0:17:45.13:0,45,627	1/1:0,24:24:72.23:892,72,0	1/1:0,22:22:66.21:818,66,0	1/1:0,10:10:30.09:372,30,0
chr10	53610169	.	AT	A	4098.69	PASS	AB=0.889;AC=19;AF=0.339;AN=56;BaseQRankSum=12.416;DP=588;FS=8.066;HRun=10;HaplotypeScore=59.6311;InbreedingCoeff=0.9021;MQ=73.68;MQ0=0;MQRankSum=-0.437;QD=19.15;ReadPosRankSum=-1.574;VQSLOD=3.6965;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:72.16:0,72,779	0/0:14,0:14:42.11:0,42,464	0/0:10,0:9:4.63:0,5,127	0/0:17,0:15:11.35:0,11,186	0/0:31,0:31:78.21:0,78,863	0/0:21,0:21:63.16:0,63,689	0/1:14,2:16:10:10,0,347	1/1:8,26:34:74.91:647,75,0	0/0:14,0:14:42.10:0,42,455	1/1:1,20:21:59.98:521,60,0	1/1:1,16:17:47.99:417,48,0	0/0:23,0:23:66.16:0,66,715	0/0:20,0:20:57.12:0,57,612	0/0:21,0:21:60.16:0,60,664	0/0:18,0:18:45.09:0,45,485	0/0:21,0:21:57.15:0,57,631	0/0:31,0:31:87.21:0,87,946	0/0:17,0:17:45.11:0,45,488	1/1:5,20:25:59.98:521,60,0	1/1:8,19:28:49.98:423,50,0	1/1:2,11:13:29.98:260,30,0	0/0:29,0:29:78.21:0,78,863	0/0:15,0:15:45.12:0,45,498	0/0:23,0:23:54.13:0,54,589	0/0:18,1:20:27.92:0,28,519	1/1:2,18:20:53.95:461,54,0	1/1:5,16:21:44.97:390,45,0	1/1:0,18:19:53.03:449,53,0
chr10	53610883	.	T	TC	6629.99	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-10.719;DP=725;FS=1.041;HRun=2;HaplotypeScore=76.5341;InbreedingCoeff=0.9787;MQ=84.06;MQ0=0;MQRankSum=-1.869;QD=33.32;ReadPosRankSum=0.690;VQSLOD=4.8686;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,111,1324	0/0:11,0:11:27.08:0,27,327	0/0:40,0:39:6.50:0,7,841	0/0:29,0:26:12.62:0,13,446	0/0:27,0:27:78.20:0,78,916	0/0:12,0:12:33.10:0,33,396	0/0:22,0:22:60.16:0,60,708	0/0:33,0:33:96.23:0,96,1129	0/0:26,0:26:78.23:0,78,949	1/1:2,26:28:78.02:1005,78,0	1/1:3,23:27:62.95:780,63,0	0/0:22,0:22:54.14:0,54,641	0/0:26,0:26:78.22:0,78,929	0/0:16,0:16:48.14:0,48,580	0/0:32,0:32:90.20:0,90,1069	0/0:20,0:20:57.17:0,57,691	0/0:34,0:34:91.28:0,91,1155	0/0:19,0:19:57.10:0,57,658	1/1:1,14:15:42.14:578,42,0	1/1:1,23:25:69.16:911,69,0	1/1:1,28:29:69.23:953,69,0	0/0:29,0:29:78.11:0,78,907	0/0:36,0:36:96.26:0,96,1146	0/0:28,0:28:81.18:0,81,955	0/0:21,0:21:54.17:0,54,666	1/1:1,34:35:99:1299,102,0	1/1:1,28:29:60.19:829,60,0	1/1:1,10:11:21.06:274,21,0
chr10	53611325	.	CT	C	489.99	PASS	AB=0.853;AC=10;AF=0.179;AN=56;BaseQRankSum=0.166;DP=477;FS=0.534;HRun=16;HaplotypeScore=78.9731;InbreedingCoeff=0.2227;MQ=74.98;MQ0=0;MQRankSum=0.357;QD=3.14;ReadPosRankSum=3.323;VQSLOD=-0.0875;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,3:32:24.96:0,25,359	0/0:7,0:7:13.54:0,14,104	0/1:21,1:18:7.96:8,0,48	0/0:16,0:13:18.52:0,19,110	0/0:21,1:22:15.25:0,15,218	0/1:19,3:23:18.23:18,0,180	0/0:8,1:10:2.74:0,3,114	1/1:7,11:19:25.95:158,26,0	0/0:16,3:20:17.70:0,18,233	0/1:13,2:15:15.21:15,0,88	0/0:15,1:16:11.90:0,12,197	0/0:10,1:11:1.16:0,1,102	0/0:11,0:11:20.81:0,21,162	0/0:7,0:7:11.92:0,12,89	0/0:19,2:21:2.70:0,3,233	0/0:19,0:19:21.35:0,21,277	1/1:12,21:35:40.07:323,40,0	0/1:6,9:17:20.33:107,0,20	0/1:9,2:12:0.10:0,0,86	0/0:16,1:17:20.88:0,21,265	0/0:7,0:7:14.97:0,15,124	0/0:6,0:7:14.80:0,15,109	0/0:12,0:13:0.48:0,0,81	0/0:10,0:12:26.81:0,27,216	0/0:22,0:27:27.90:0,28,206	0/0:23,0:26:33.95:0,34,260	0/0:17,1:18:17.97:0,18,226	0/1:12,1:13:0.23:0,0,89
chr10	53612144	.	CCCG	C	538.83	PASS	AB=0.929;AC=22;AF=0.393;AN=56;BaseQRankSum=4.421;DP=224;FS=0.000;HRun=0;HaplotypeScore=76.2205;InbreedingCoeff=0.1094;MQ=46.54;MQ0=3;MQRankSum=-5.238;QD=4.14;ReadPosRankSum=2.707;VQSLOD=1.3088;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:42.13:0,42,866	0/0:2,0:2:6.02:0,6,94	0/0:5,0:5:15.05:0,15,207	0/1:3,0:3:23.51:24,0,33	0/1:10,0:10:54.52:55,0,59	1/1:2,5:6:5.38:44,5,0	1/1:8,1:9:21.86:192,22,0	0/1:13,0:12:27.59:35,0,28	1/1:9,0:8:2.98:21,3,0	0/1:13,2:14:61.34:62,0,61	0/1:7,2:9:48.78:69,0,49	0/0:10,0:10:15.40:0,15,385	0/0:7,0:7:18.06:0,18,386	0/1:6,0:6:12.09:15,0,12	0/0:8,0:8:18.06:0,18,367	0/0:10,0:10:30.10:0,30,643	0/0:6,0:6:15.05:0,15,299	0/0:6,0:6:15.05:0,15,314	0/1:8,1:9:39.32:41,0,39	0/1:5,2:7:15.26:15,0,37	1/1:5,1:6:5.96:50,6,0	0/0:7,0:7:12.04:0,12,247	0/0:7,0:7:12.04:0,12,287	0/0:9,0:9:21.07:0,21,452	0/1:4,0:4:18.68:19,0,21	0/1:9,1:10:11.19:53,0,11	1/1:10,0:10:3.47:10,3,0	1/1:3,0:3:2.38:8,2,0
chr10	53612204	.	CTGT	C	248.73	PASS	AB=0.963;AC=13;AF=0.241;AN=54;BaseQRankSum=-0.003;DP=358;FS=0.000;HRun=0;HaplotypeScore=112.2258;InbreedingCoeff=0.2469;MQ=69.22;MQ0=9;MQRankSum=-0.579;QD=3.27;ReadPosRankSum=-3.231;VQSLOD=1.4102;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:36.01:0,36,588	0/0:2,0:2:5.98:0,6,48	0/0:60,0:24:13.86:0,14,422	0/0:67,3:19:15.62:0,16,364	./.	0/0:6,0:5:2.54:0,3,14	0/1:8,1:7:14.33:42,0,14	0/1:10,1:11:13.32:50,0,13	0/0:2,0:2:2.96:0,3,19	0/1:12,0:11:10.03:10,0,16	0/0:8,0:8:8.81:0,9,36	0/0:8,0:8:23.83:0,24,171	0/0:6,0:6:17.96:0,18,158	0/0:4,0:4:8.20:0,8,38	0/0:19,0:19:56.75:0,57,478	0/0:15,0:15:41.68:0,42,346	0/1:8,0:8:10.53:11,0,11	1/1:2,1:3:2.36:65,2,0	0/0:12,0:12:7.01:0,7,18	0/1:13,0:13:18.27:18,0,35	1/1:7,0:7:2.89:35,3,0	0/0:11,0:11:9.55:0,10,188	0/0:7,0:7:20.84:0,21,151	0/0:12,0:12:32.66:0,33,259	1/1:3,0:2:1.55:4,2,0	1/1:9,1:9:15.41:156,15,0	0/0:5,0:5:4.97:0,5,18	0/0:2,0:2:4.74:0,5,15
chr10	53612237	.	CTA	C	2590.24	PASS	AB=0.978;AC=40;AF=0.714;AN=56;BaseQRankSum=-7.491;DP=540;FS=6.070;HRun=0;HaplotypeScore=140.6634;InbreedingCoeff=-0.2755;MQ=64.84;MQ0=18;MQRankSum=-4.320;QD=4.84;ReadPosRankSum=-9.057;VQSLOD=-0.3252;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:32,3:35:99:369,0,220	0/0:5,0:4:5.95:0,6,42	0/1:66,0:14:18.45:18,0,93	0/1:91,0:30:32.32:32,0,166	1/1:18,0:16:8.98:74,9,0	1/1:22,0:20:14.63:114,15,0	1/1:15,0:13:5.57:32,6,0	1/1:14,0:14:19.74:147,20,0	1/1:10,0:8:7.80:63,8,0	1/1:12,0:11:17.87:131,18,0	0/1:22,0:21:6.35:41,0,6	0/1:10,0:10:45.58:46,0,96	0/1:10,1:11:12.73:168,0,13	1/1:7,0:7:5.99:50,6,0	0/1:19,1:20:92.02:92,0,180	0/1:15,1:16:42.53:197,0,43	1/1:14,0:13:17.47:127,17,0	0/1:7,0:7:9.55:48,0,10	1/1:15,0:15:25.63:181,26,0	1/1:19,0:19:11.65:92,12,0	1/1:11,0:11:13.23:103,13,0	0/1:20,1:21:91.24:213,0,91	0/1:14,0:14:92.43:92,0,114	0/1:22,0:22:62.14:62,0,166	0/1:14,0:13:19.87:40,0,20	1/1:19,0:16:17.97:191,18,0	1/1:7,0:7:2.48:11,2,0	0/1:3,0:3:13.06:13,0,29
chr10	53612722	.	AAG	A	1800.81	PASS	AB=1.000;AC=18;AF=0.321;AN=56;BaseQRankSum=0.272;DP=470;FS=10.778;HRun=0;HaplotypeScore=91.8196;InbreedingCoeff=0.7785;MQ=47.56;MQ0=15;MQRankSum=-2.204;QD=10.53;ReadPosRankSum=-2.187;VQSLOD=2.2948;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:22:39.85:0,40,426	0/0:8,0:8:0.84:0,1,185	0/0:11,0:7:7.34:0,7,53	0/0:11,0:7:4.08:0,4,65	1/1:21,1:21:36.86:316,37,0	1/1:19,2:21:34.80:347,35,0	1/1:12,1:10:12.61:113,13,0	0/1:26,0:26:59.03:59,0,232	1/1:17,0:16:14.96:207,15,0	0/0:23,0:23:41.78:0,42,424	0/0:17,0:16:26.93:0,27,294	0/0:8,0:8:11.84:0,12,200	0/0:22,0:21:38.50:0,39,416	1/1:9,1:10:27.02:236,27,0	0/0:17,0:17:36.61:0,37,317	0/0:17,0:16:13.49:0,13,326	1/1:19,0:16:24.75:183,25,0	1/1:12,0:10:14.25:163,14,0	0/0:15,0:15:16.99:0,17,260	0/0:26,0:26:22.71:0,23,265	0/1:10,0:9:0.34:0,0,32	0/0:12,0:11:17.72:0,18,244	0/0:12,0:9:22.93:0,23,200	0/0:21,0:21:45.15:0,45,460	1/1:17,4:21:42.93:374,43,0	0/0:22,0:20:55.68:0,56,508	0/0:19,0:18:29.39:0,29,335	0/0:13,0:11:12.27:0,12,150
chr10	53612723	.	AG	A	2236.57	PASS	AB=0.968;AC=21;AF=0.375;AN=56;BaseQRankSum=0.615;DP=457;FS=5.255;HRun=1;HaplotypeScore=81.6535;InbreedingCoeff=0.6228;MQ=48.23;MQ0=14;MQRankSum=-4.320;QD=10.80;ReadPosRankSum=-2.116;VQSLOD=0.9427;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:19:35.35:0,35,303	0/1:8,0:8:12.75:13,0,146	0/0:11,0:7:7.51:0,8,52	0/0:11,1:7:3.43:0,3,63	1/1:14,4:18:47.08:428,47,0	1/1:19,2:21:52.20:408,52,0	1/1:10,2:9:19.79:134,20,0	0/1:23,3:26:99:115,0,179	1/1:8,8:15:26.44:217,26,0	0/0:23,0:23:34.15:0,34,297	0/0:17,0:16:23.07:0,23,211	0/0:7,1:8:13.46:0,13,158	0/0:20,0:19:38.37:0,38,335	1/1:10,2:12:35.94:306,36,0	0/0:16,0:16:18.72:0,19,225	0/1:16,1:16:0.10:0,0,246	1/1:19,1:17:31.26:209,31,0	1/1:11,1:10:24.28:174,24,0	0/0:15,0:15:16.99:0,17,236	0/0:26,0:26:21.91:0,22,208	0/1:10,0:9:3.55:4,0,21	0/1:13,0:12:6.52:7,0,175	0/0:12,0:9:2.91:0,3,111	0/0:17,0:17:28.12:0,28,324	1/1:17,4:21:50.15:421,50,0	0/0:21,0:19:47.38:0,47,400	0/0:18,0:17:18.69:0,19,217	0/0:12,0:10:12.08:0,12,130
chr10	53612727	.	AG	A	322.76	PASS	AB=0.887;AC=8;AF=0.143;AN=56;BaseQRankSum=5.285;DP=460;FS=3.177;HRun=1;HaplotypeScore=90.9800;InbreedingCoeff=0.4058;MQ=53.63;MQ0=12;MQRankSum=-5.054;QD=3.23;ReadPosRankSum=-1.871;VQSLOD=-0.5284;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:20:48.07:0,48,676	0/0:6,0:6:18.06:0,18,275	0/0:13,0:9:12.75:0,13,126	0/0:14,0:9:14.94:0,15,192	0/0:21,0:21:37.43:0,37,360	0/0:18,0:18:33.04:0,33,254	0/0:11,1:9:17.48:0,17,131	0/1:25,2:27:53.12:53,0,493	0/1:12,5:16:9.74:10,0,148	0/0:22,0:22:42.17:0,42,486	0/0:18,0:17:10.64:0,11,333	0/0:7,1:8:20.74:0,21,286	0/0:19,0:18:41.93:0,42,605	0/0:13,0:13:33.35:0,33,198	0/0:16,0:16:28.24:0,28,520	0/0:16,0:15:21.21:0,21,452	1/1:18,0:16:30.41:197,30,0	1/1:11,2:10:25.94:184,26,0	0/0:18,0:18:42.52:0,43,461	0/0:28,0:28:23.91:0,24,293	0/0:8,0:8:5.19:0,5,44	0/1:9,2:10:5.35:5,0,310	0/0:9,0:7:18.02:0,18,242	0/0:16,0:16:31.19:0,31,654	0/0:19,1:20:42.95:0,43,293	0/0:21,0:19:52.03:0,52,519	0/0:20,0:19:32.23:0,32,391	0/1:13,0:11:16.23:16,0,81
chr10	53612732	.	G	GAAAGAAAAGA	6532.28	PASS	AB=0.931;AC=18;AF=0.321;AN=56;BaseQRankSum=-6.431;DP=475;FS=3.247;HRun=0;HaplotypeScore=148.5419;InbreedingCoeff=0.8336;MQ=56.83;MQ0=10;MQRankSum=-7.046;QD=36.29;ReadPosRankSum=-1.042;VQSLOD=4.6560;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:21:38.65:0,39,909	0/0:7,0:7:21.07:0,21,576	0/1:13,0:9:24.20:24,0,193	0/0:21,0:11:10.15:0,10,306	0/0:23,0:23:63.21:0,63,1524	0/0:15,0:15:42.14:0,42,1021	0/0:11,0:10:18.06:0,18,406	0/0:22,0:22:27.09:0,27,629	0/0:20,0:19:30.07:0,30,572	1/1:5,17:23:40.88:1102,41,0	1/1:4,13:17:17.99:687,18,0	0/0:9,0:9:18.06:0,18,461	0/0:19,0:18:30.10:0,30,846	0/0:15,0:15:27.08:0,27,599	0/0:17,0:17:27.09:0,27,724	0/0:15,0:14:24.07:0,24,586	0/0:19,0:17:13.43:0,13,135	0/1:12,0:10:0.41:0,0,15	1/1:11,7:18:21.07:674,21,0	1/1:7,17:25:18.02:636,18,0	1/1:3,0:11:6.02:169,6,0	0/0:13,0:12:24.02:0,24,642	0/0:9,0:7:15.05:0,15,443	0/0:16,0:16:39.13:0,39,1051	0/0:20,0:20:36.10:0,36,838	1/1:5,17:22:54.15:1982,54,0	1/1:7,14:21:15.05:737,15,0	1/1:7,0:10:24.03:521,24,0
chr10	53613110	.	C	CG	56.93	PASS	AB=0.894;AC=4;AF=0.071;AN=56;BaseQRankSum=0.619;DP=407;FS=7.013;HRun=0;HaplotypeScore=76.2502;InbreedingCoeff=0.1316;MQ=47.88;MQ0=44;MQRankSum=-2.199;QD=0.96;ReadPosRankSum=-0.105;VQSLOD=0.6926;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:34:60.20:0,60,832	0/0:4,0:3:9.03:0,9,125	0/1:24,0:3:0:0,0,0	0/0:27,0:5:9.42:0,9,72	0/1:13,0:13:6.20:6,0,93	0/0:17,0:17:38.65:0,39,292	0/0:14,0:14:28.88:0,29,226	0/1:6,6:10:29.56:129,0,30	0/0:8,0:8:15.77:0,16,113	0/0:20,0:18:48.83:0,49,406	0/0:16,0:14:19.91:0,20,165	0/0:12,0:12:27.09:0,27,366	0/0:11,0:11:21.07:0,21,286	0/0:9,0:9:16.19:0,16,108	0/0:16,0:16:33.10:0,33,437	0/0:14,0:15:33.38:0,33,422	0/0:16,0:17:34.80:0,35,241	0/0:21,0:21:36.06:0,36,245	0/0:8,0:7:11.98:0,12,105	0/0:18,0:18:23.95:0,24,177	0/0:2,0:2:2.13:0,2,5	0/0:11,0:10:18.06:0,18,237	0/0:14,0:14:33.10:0,33,431	0/0:14,0:14:33.11:0,33,459	0/1:9,1:10:10.69:11,0,70	0/0:15,0:13:30.37:0,30,235	0/0:16,0:16:41.91:0,42,313	0/0:8,0:4:9:0,9,80
chr10	53613120	.	AGAACC	A	514.49	PASS	AB=0.912;AC=7;AF=0.125;AN=56;BaseQRankSum=3.464;DP=458;FS=1.844;HRun=0;HaplotypeScore=117.1386;InbreedingCoeff=0.1193;MQ=46.70;MQ0=47;MQRankSum=-3.513;QD=4.85;ReadPosRankSum=-3.328;VQSLOD=0.7035;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:35:72.16:0,72,1536	0/0:5,0:4:12.04:0,12,284	0/0:26,0:5:11.66:0,12,126	0/0:30,0:7:14.30:0,14,126	0/0:10,0:10:23.99:0,24,322	0/0:18,0:18:54.14:0,54,967	0/0:14,0:14:38.94:0,39,790	0/0:18,0:16:46.82:0,47,728	0/0:12,0:11:20.94:0,21,390	0/0:23,0:21:55.94:0,56,1135	0/1:19,0:17:19.77:20,0,530	0/0:13,0:13:32.12:0,32,637	0/0:9,0:9:21.04:0,21,374	0/0:9,0:9:18.32:0,18,339	0/0:14,0:14:26.17:0,26,589	0/0:14,0:14:39.12:0,39,795	0/1:23,0:23:9.61:10,0,988	0/0:22,0:21:57.15:0,57,1207	0/1:17,2:19:99:149,0,460	0/0:15,0:15:35.60:0,36,630	1/1:2,0:2:5.91:47,6,0	0/0:12,0:10:23.94:0,24,465	0/0:16,0:16:46.39:0,46,966	0/0:13,0:13:35.88:0,36,771	0/0:12,0:12:26.92:0,27,427	0/1:17,5:20:99:236,0,695	0/1:17,4:21:99:181,0,840	0/0:9,0:5:11.25:0,11,197
chr10	53613121	.	GAACCAAAA	G	718.79	PASS	AB=0.958;AC=7;AF=0.125;AN=56;BaseQRankSum=3.813;DP=454;FS=2.589;HRun=0;HaplotypeScore=137.3500;InbreedingCoeff=0.1407;MQ=48.22;MQ0=45;MQRankSum=-2.837;QD=7.81;ReadPosRankSum=-5.273;VQSLOD=-0.0792;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:35:63.20:0,63,2063	0/0:5,0:4:12.04:0,12,497	0/0:26,0:6:15.05:0,15,294	0/0:29,0:7:15.05:0,15,263	0/0:9,0:9:21.05:0,21,443	0/0:18,0:18:51.13:0,51,1277	0/0:14,0:14:36.12:0,36,1121	0/0:18,0:16:48.11:0,48,1403	0/0:12,0:11:21.07:0,21,449	0/0:21,0:21:51.74:0,52,1376	0/1:19,0:17:99:117,0,683	0/0:13,0:13:29.93:0,30,1004	0/0:8,0:8:15.52:0,16,569	0/0:9,0:9:21.03:0,21,444	0/0:14,0:14:30.10:0,30,889	0/0:14,0:14:39.13:0,39,1454	0/0:23,0:23:24.64:0,25,1638	0/0:22,0:21:57.19:0,57,1776	0/1:14,5:19:99:222,0,528	0/0:15,0:15:16.15:0,16,714	1/1:2,0:2:5.81:73,6,0	0/0:12,0:10:24.08:0,24,820	0/0:15,0:15:45.15:0,45,1492	0/0:13,0:13:34.47:0,34,1192	0/0:12,0:12:27.09:0,27,731	0/1:22,0:20:99:225,0,698	0/1:21,0:21:99:205,0,1054	0/1:9,0:5:1.12:1,0,242
chr10	53613125	.	C	CA	1826.82	PASS	AB=0.847;AC=36;AF=0.643;AN=56;BaseQRankSum=8.553;DP=472;FS=3.061;HRun=15;HaplotypeScore=95.9074;InbreedingCoeff=0.6624;MQ=52.85;MQ0=44;MQRankSum=-5.902;QD=5.49;ReadPosRankSum=-1.085;VQSLOD=2.5993;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,1:33:21.74:0,22,185	0/0:6,0:6:14.62:0,15,89	0/0:32,0:9:7.95:0,8,55	0/1:31,0:9:0.63:1,0,50	1/1:6,2:10:8.74:54,9,0	1/1:12,1:17:21.60:135,22,0	1/1:9,1:13:21.14:110,21,0	1/1:7,1:17:17.82:100,18,0	0/1:6,6:12:9.06:35,0,9	1/1:22,0:21:38.34:171,38,0	1/1:18,0:18:40.08:186,40,0	0/0:11,0:12:15.80:0,16,88	0/0:8,0:8:16.33:0,16,91	1/1:9,0:9:3.39:19,3,0	0/0:16,0:16:20.51:0,21,124	0/0:14,0:17:36.15:0,36,202	1/1:26,0:26:45.18:231,45,0	1/1:22,0:21:39.29:213,39,0	1/1:18,0:18:21.23:99,21,0	1/1:16,0:19:35.55:161,36,0	1/1:2,0:2:4.61:18,5,0	0/1:10,2:10:8.57:9,0,61	0/1:13,2:15:20.28:20,0,105	0/0:11,0:13:25.51:0,26,139	1/1:5,2:13:11.52:68,12,0	1/1:21,0:19:30.60:135,31,0	1/1:22,0:22:51.97:224,52,0	1/1:9,0:5:8.39:40,8,0
chr10	53613134	.	A	AAG	2010.95	PASS	AB=0.960;AC=16;AF=0.286;AN=56;BaseQRankSum=9.774;DP=473;FS=6.203;HRun=0;HaplotypeScore=100.1641;InbreedingCoeff=0.2780;MQ=59.93;MQ0=28;MQRankSum=-10.062;QD=10.64;ReadPosRankSum=5.244;VQSLOD=2.6652;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:34:45.59:0,46,600	0/0:6,0:6:18.05:0,18,235	0/0:30,0:10:23.79:0,24,250	0/0:29,0:14:2.14:0,2,211	0/0:8,0:8:14.09:0,14,105	0/1:14,0:14:15.81:16,0,138	0/1:15,0:15:20.41:20,0,97	0/0:23,0:22:28.24:0,28,286	0/0:10,0:9:9.39:0,9,86	1/1:17,4:21:35.20:406,35,0	1/1:18,0:18:22.85:410,23,0	0/0:13,0:13:26.99:0,27,288	0/0:9,0:9:21.05:0,21,258	0/1:8,0:8:1.18:1,0,70	0/0:14,0:14:33.05:0,33,390	0/0:19,0:19:48.12:0,48,586	0/0:27,0:27:57.67:0,58,506	0/0:20,0:19:41.12:0,41,327	0/1:19,3:22:99:211,0,129	1/1:14,3:18:2.75:294,3,0	0/1:3,0:3:6.62:26,0,7	0/0:14,0:13:38.92:0,39,389	0/0:15,0:15:38.81:0,39,417	0/0:11,0:11:26.33:0,26,346	0/1:14,0:14:13.85:14,0,142	1/1:16,4:19:27.39:333,27,0	0/1:20,2:23:21.54:410,0,22	0/1:10,0:7:34.52:42,0,35
chr10	53613135	.	A	AG	424.50	PASS	AB=0.759;AC=9;AF=0.161;AN=56;BaseQRankSum=9.495;DP=472;FS=3.576;HRun=0;HaplotypeScore=99.0297;InbreedingCoeff=0.1267;MQ=60.29;MQ0=25;MQRankSum=-9.490;QD=3.08;ReadPosRankSum=4.701;VQSLOD=2.7029;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:34:62.88:0,63,667	0/0:6,0:6:18.05:0,18,233	0/0:29,0:10:25.50:0,26,227	0/0:27,0:14:1.60:0,2,184	0/0:8,0:8:19.45:0,19,127	0/0:14,0:14:27.87:0,28,224	0/0:15,0:15:36.84:0,37,232	0/0:24,0:23:54.34:0,54,393	0/0:10,0:9:6.95:0,7,70	0/1:13,8:20:5.17:101,0,5	1/1:8,11:18:15.78:149,16,0	0/0:13,0:13:26.86:0,27,276	0/0:10,0:10:24.05:0,24,280	0/0:8,0:8:17.01:0,17,110	0/0:14,0:14:33.05:0,33,390	0/0:19,0:19:51.08:0,51,594	0/0:27,0:27:48.55:0,49,256	0/0:20,0:19:31.41:0,31,143	0/1:17,3:21:36.37:36,0,131	0/1:11,7:18:10.43:93,0,10	0/1:2,1:3:5.34:5,0,12	0/0:14,0:13:37.24:0,37,369	0/0:15,0:15:34.76:0,35,380	0/0:11,0:11:30.01:0,30,356	0/0:14,0:14:30.69:0,31,212	0/1:13,8:20:23.74:72,0,24	0/1:14,10:24:39.31:98,0,39	0/1:9,2:7:10.16:10,0,31
chr10	53613136	.	A	AAAAAAG	6775.85	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=3.403;DP=472;FS=32.872;HRun=0;HaplotypeScore=118.1664;InbreedingCoeff=0.5705;MQ=60.56;MQ0=22;MQRankSum=-10.158;QD=32.11;ReadPosRankSum=-0.106;VQSLOD=2.8453;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:35:51.02:0,51,663	0/0:6,0:6:17.97:0,18,272	0/0:27,0:10:25.01:0,25,209	0/0:26,0:14:18.20:0,18,223	0/1:8,0:8:32.48:32,0,79	0/1:14,0:14:14.94:15,0,124	0/1:15,0:15:47.72:48,0,101	0/1:24,0:23:44.31:44,0,169	0/1:10,0:9:6.67:7,0,97	1/1:4,9:22:55.57:1147,56,0	1/1:7,11:18:47.89:1105,48,0	0/0:13,0:13:20.12:0,20,283	0/0:10,0:10:25.86:0,26,356	0/0:7,0:7:2.48:0,2,28	0/0:14,0:14:32.95:0,33,429	0/0:19,0:19:50.68:0,51,660	0/0:26,0:26:50.67:0,51,539	0/0:20,0:19:15.34:0,15,373	1/1:18,3:21:24.94:664,25,0	1/1:11,7:19:38.31:764,38,0	1/1:2,1:3:9.02:174,9,0	0/0:15,0:14:32.82:0,33,380	0/0:15,0:15:31.46:0,31,446	0/0:11,0:11:30.08:0,30,514	0/0:14,0:14:3.25:0,3,112	1/1:13,8:20:53.48:1063,53,0	1/1:12,10:24:68.31:1387,68,0	1/1:8,2:7:18.01:325,18,0
chr10	53613137	.	A	AG	925.42	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-2.638;DP=469;FS=25.398;HRun=0;HaplotypeScore=98.3416;InbreedingCoeff=0.8831;MQ=60.88;MQ0=20;MQRankSum=2.175;QD=21.03;ReadPosRankSum=3.388;VQSLOD=2.7166;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:35:65.71:0,66,690	0/0:6,0:6:18.05:0,18,231	0/0:26,0:10:25.64:0,26,233	0/0:26,0:14:11.42:0,11,214	0/0:8,0:8:19.23:0,19,121	0/0:13,0:13:24.68:0,25,193	0/0:15,0:15:37.27:0,37,232	0/0:23,0:22:54.06:0,54,396	0/0:10,0:9:6.95:0,7,70	0/0:23,0:23:38.56:0,39,180	0/0:19,0:18:45.36:0,45,189	0/0:13,0:13:29.77:0,30,289	0/0:10,0:10:27.05:0,27,304	0/0:7,0:7:13.87:0,14,90	0/0:14,0:14:33.04:0,33,387	0/0:19,0:19:51.07:0,51,589	1/1:1,23:24:51.10:591,51,0	1/1:1,18:19:34.81:456,35,0	0/0:22,0:22:55.26:0,55,344	0/0:20,0:20:35.82:0,36,157	0/0:3,0:3:7.90:0,8,41	0/0:15,0:14:39.88:0,40,371	0/0:15,0:15:34.73:0,35,375	0/0:11,0:11:30.02:0,30,356	0/0:14,0:14:30.43:0,30,205	0/0:21,0:20:49.40:0,49,237	0/0:24,0:24:60.96:0,61,284	0/0:11,0:7:15.42:0,15,74
chr10	53613299	.	G	GT	1292.59	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-8.882;DP=533;FS=9.141;HRun=10;HaplotypeScore=52.3716;InbreedingCoeff=0.9674;MQ=68.23;MQ0=0;MQRankSum=1.303;QD=18.21;ReadPosRankSum=-1.690;VQSLOD=3.2626;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:65.88:0,66,534	0/0:12,0:12:35.96:0,36,296	0/0:9,0:9:12.42:0,12,97	0/0:6,0:6:8.99:0,9,74	0/0:24,0:24:65.87:0,66,534	0/0:20,0:20:47.89:0,48,390	0/0:13,0:13:35.90:0,36,289	1/1:9,18:28:51.01:485,51,0	0/0:15,0:15:41.95:0,42,345	0/0:31,0:33:70.91:0,71,572	0/0:32,0:32:45.94:0,46,580	0/0:22,0:22:56.91:0,57,464	0/0:12,0:12:32.96:0,33,271	0/0:9,0:9:20.96:0,21,172	0/0:14,0:14:38.94:0,39,318	0/0:14,0:14:38.95:0,39,320	1/1:0,18:18:48.12:512,48,0	1/1:5,20:25:35.19:438,35,0	0/0:31,0:33:81.79:0,82,639	0/0:16,0:16:41.95:0,42,345	0/0:10,0:10:26.97:0,27,222	0/0:25,0:25:71.90:0,72,586	0/0:21,0:21:59.39:0,59,483	0/0:17,0:17:47.92:0,48,390	0/0:18,0:18:47.83:0,48,382	0/0:19,0:19:44.94:0,45,369	0/0:32,0:33:82.78:0,83,653	0/0:10,0:10:29.93:0,30,240
chr10	53614186	.	A	AACGG	5347.45	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-10.461;DP=673;FS=5.959;HRun=0;HaplotypeScore=103.3775;InbreedingCoeff=0.9879;MQ=71.95;MQ0=0;MQRankSum=-0.263;QD=37.93;ReadPosRankSum=1.640;VQSLOD=5.0579;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:84.26:0,84,1351	0/0:4,0:4:12.03:0,12,174	0/0:16,0:15:21.53:0,22,278	0/0:24,0:24:32.85:0,33,395	1/1:2,10:13:22.23:421,22,0	1/1:1,20:21:48.16:1172,48,0	1/1:14,17:32:39.13:916,39,0	0/0:29,0:29:39.08:0,39,526	1/1:6,20:30:45.15:1099,45,0	0/0:30,0:30:47.95:0,48,634	0/0:15,0:15:36.08:0,36,540	0/0:34,0:34:78.21:0,78,1183	0/0:25,0:25:54.17:0,54,857	1/1:6,22:29:57.20:1376,57,0	0/0:19,0:19:36.11:0,36,567	0/0:25,0:25:54.18:0,54,882	0/0:41,0:41:99:0,102,1552	0/0:25,0:25:45.08:0,45,635	0/0:21,0:21:21.06:0,21,321	0/0:17,0:17:25.33:0,25,397	0/0:38,0:38:75.19:0,75,1112	0/0:16,0:16:39.10:0,39,566	0/0:20,0:20:42.12:0,42,643	0/0:36,0:36:78.21:0,78,1214	1/1:7,7:15:15.05:364,15,0	0/0:22,0:22:39.13:0,39,639	0/0:21,0:21:54.17:0,54,863	0/0:12,0:12:36.08:0,36,533
chr10	53614969	.	GA	G	379.78	PASS	AB=0.889;AC=5;AF=0.089;AN=56;BaseQRankSum=5.895;DP=626;FS=19.703;HRun=10;HaplotypeScore=62.2349;InbreedingCoeff=0.7495;MQ=71.74;MQ0=1;MQRankSum=-1.718;QD=9.04;ReadPosRankSum=0.994;VQSLOD=0.6671;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:25:63.17:0,63,697	0/0:13,0:13:36.10:0,36,398	0/0:28,0:21:13.87:0,14,298	0/0:15,0:8:8.50:0,9,49	0/0:32,1:33:55.16:0,55,836	0/0:21,0:21:57.15:0,57,630	0/0:15,1:16:22.06:0,22,464	0/0:36,0:35:87.17:0,87,935	0/0:27,0:27:69.19:0,69,761	0/0:34,0:34:93.25:0,93,1026	0/0:18,1:19:28.17:0,28,538	0/0:17,1:18:28.09:0,28,538	0/0:18,0:18:45.11:0,45,488	0/0:19,0:20:53.96:0,54,570	0/0:18,0:18:45.11:0,45,490	0/0:21,0:21:51.14:0,51,564	1/1:2,13:15:32.99:286,33,0	1/1:2,9:11:23.99:208,24,0	0/0:12,1:13:13:0,13,350	0/0:29,0:29:75.20:0,75,829	0/0:15,0:15:39.09:0,39,423	0/0:21,0:22:59.98:0,60,636	0/0:30,0:30:87.21:0,87,944	0/1:14,2:16:12.75:13,0,325	0/0:38,0:38:99:0,99,1078	0/0:26,0:26:72.19:0,72,796	0/0:27,0:27:72.18:0,72,787	0/0:21,0:21:55.03:0,55,599
chr10	53615128	.	T	TG	15028.34	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-16.503;DP=659;FS=0.957;HRun=4;HaplotypeScore=57.9268;InbreedingCoeff=0.9998;MQ=83.89;MQ0=0;MQRankSum=-3.810;QD=36.57;ReadPosRankSum=1.013;VQSLOD=4.9582;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:96.27:0,96,1089	0/0:17,0:17:48.14:0,48,545	0/0:21,0:21:51.13:0,51,564	0/0:27,0:27:70.03:0,70,752	1/1:1,27:28:75.25:1022,75,0	1/1:1,25:26:69.23:944,69,0	1/1:2,15:17:42.14:575,42,0	1/1:5,28:33:84.28:1147,84,0	1/1:1,24:25:69.23:943,69,0	1/1:0,24:24:72.24:985,72,0	1/1:1,20:21:51.17:697,51,0	0/0:19,0:19:57.16:0,57,647	0/0:22,0:22:63.18:0,63,714	1/1:3,18:21:54.18:739,54,0	0/0:25,0:25:75.21:0,75,851	0/0:23,1:24:28.16:0,28,708	1/1:0,19:18:54.18:737,54,0	1/1:1,22:23:66.22:903,66,0	1/1:4,21:25:63.20:841,63,0	1/1:2,15:17:45.15:615,45,0	1/1:2,28:30:78.26:1067,78,0	0/0:18,0:18:48.14:0,48,545	0/0:19,0:19:54.14:0,54,603	0/0:23,0:23:69.20:0,69,783	1/1:1,23:24:69.23:944,69,0	1/1:2,30:32:93.31:1267,93,0	1/1:1,30:31:87.29:1190,87,0	1/1:3,12:15:30.10:410,30,0
chr10	53615873	.	T	TA	8521.36	PASS	AB=0.730;AC=53;AF=0.946;AN=56;BaseQRankSum=5.551;DP=516;FS=0.868;HRun=2;HaplotypeScore=248.8910;InbreedingCoeff=-0.0583;MQ=43.68;MQ0=0;MQRankSum=-1.174;QD=16.51;ReadPosRankSum=5.800;VQSLOD=4.6265;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,19:24:44.89:367,45,0	1/1:3,3:6:13.45:99,13,0	0/1:7,3:10:16.16:132,0,16	0/1:10,2:13:5.94:147,0,6	1/1:12,19:31:66.87:499,67,0	1/1:4,11:15:39.03:299,39,0	1/1:5,3:8:12.82:95,13,0	1/1:3,27:30:72.59:549,73,0	1/1:2,9:11:23.36:184,23,0	1/1:3,19:22:60.77:513,61,0	1/1:3,18:21:38.32:327,38,0	1/1:7,8:15:33.50:253,34,0	1/1:5,28:33:85.86:702,86,0	1/1:4,13:17:18.33:183,18,0	1/1:5,14:19:41.18:303,41,0	1/1:9,13:22:42.86:387,43,0	1/1:9,11:20:35.81:297,36,0	1/1:7,4:12:6.95:95,7,0	1/1:7,8:15:26.27:233,26,0	1/1:6,19:25:52.58:438,53,0	1/1:6,3:9:15.37:94,15,0	1/1:2,14:16:35.65:268,36,0	0/1:4,17:21:10.84:254,0,11	1/1:2,14:16:28.92:270,29,0	1/1:2,25:27:68.15:532,68,0	1/1:5,21:26:55.10:488,55,0	1/1:6,15:21:51.01:433,51,0	1/1:8,2:10:11:82,11,0
chr10	53616291	.	A	AACACAC	8131.74	PASS	AB=0.962;AC=29;AF=0.537;AN=54;BaseQRankSum=0.214;DP=635;FS=4.447;HRun=0;HaplotypeScore=169.4072;InbreedingCoeff=0.8122;MQ=62.02;MQ0=8;MQRankSum=-9.948;QD=25.10;ReadPosRankSum=-3.041;VQSLOD=4.2074;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:32:3.18:0,3,565	0/0:4,0:4:9.03:0,9,184	0/0:21,0:15:2.74:0,3,12	./.	1/1:15,5:24:19.07:633,19,0	1/1:20,7:37:51.64:1219,52,0	1/1:13,6:23:21.07:627,21,0	0/0:22,0:25:5.97:0,6,61	1/1:11,9:25:28.03:700,28,0	1/1:16,0:19:21.96:590,22,0	1/1:10,2:17:14.95:456,15,0	0/0:27,0:29:53.86:0,54,869	0/0:26,0:29:45.67:0,46,836	1/1:8,6:19:18.06:468,18,0	0/0:33,0:34:66.21:0,66,1268	0/0:22,0:23:42.97:0,43,772	0/0:13,0:16:6.02:0,6,84	0/0:10,0:19:21.07:0,21,288	1/1:10,2:12:20.08:428,20,0	1/1:9,2:19:18.06:525,18,0	1/1:17,0:21:0.21:0,0,0	0/0:22,0:24:24.94:0,25,421	0/1:22,0:24:8.32:8,0,396	0/0:25,0:26:45.13:0,45,811	1/1:9,13:26:29.94:911,30,0	1/1:17,0:22:27.05:606,27,0	1/1:19,0:24:26.98:650,27,0	1/1:6,0:9:15.05:311,15,0
chr10	53616742	.	GCACCTA	G	16722.87	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=17.563;DP=649;FS=0.000;HRun=0;HaplotypeScore=147.2675;InbreedingCoeff=0.9976;MQ=86.93;MQ0=0;MQRankSum=-19.272;QD=50.52;ReadPosRankSum=3.891;VQSLOD=4.9320;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,117,4022	0/0:10,0:10:30.10:0,30,1081	0/0:27,0:27:75.26:0,75,2647	0/0:28,0:28:81.21:0,81,2527	1/1:0,17:17:27.09:644,27,0	1/1:3,23:26:57.20:1369,57,0	1/1:4,12:16:24.08:576,24,0	0/0:29,0:29:81.27:0,81,2754	1/1:0,25:26:60.21:1441,60,0	1/1:2,20:22:60.21:1442,60,0	1/1:1,20:21:42.14:972,42,0	0/0:22,0:22:66.23:0,66,2360	0/0:35,0:35:99:0,102,3555	1/1:0,27:27:54.19:1297,54,0	0/0:38,0:38:99:0,114,4047	0/0:30,0:30:90.31:0,90,3209	1/1:1,17:18:36.12:864,36,0	1/1:2,10:12:21.07:502,21,0	1/1:1,21:22:63.20:1419,63,0	1/1:0,23:23:45.15:1081,45,0	1/1:1,20:21:18.06:432,18,0	0/0:28,0:28:84.29:0,84,2949	0/0:17,0:17:48.16:0,48,1723	0/0:14,0:14:42.14:0,42,1455	1/1:1,21:22:42.14:1009,42,0	1/1:1,18:19:51.18:1224,51,0	1/1:1,29:30:75.26:1801,75,0	1/1:0,9:9:27.09:649,27,0
chr10	53619590	.	GGGAA	G	2634.57	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=4.938;DP=412;FS=9.058;HRun=0;HaplotypeScore=93.7915;InbreedingCoeff=0.8648;MQ=74.49;MQ0=3;MQRankSum=-5.249;QD=22.71;ReadPosRankSum=9.105;VQSLOD=1.6731;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:68.99:0,69,1007	0/0:1,0:1:3.01:0,3,52	0/0:32,0:17:25.44:0,25,594	0/0:22,0:13:34.95:0,35,521	1/1:3,5:8:4.22:46,4,0	1/1:14,2:16:36.04:543,36,0	1/1:19,0:19:38.30:496,38,0	0/0:38,0:38:98.57:0,99,1021	1/1:19,2:21:43.70:726,44,0	0/0:16,0:16:47.68:0,48,576	0/0:11,0:11:23.78:0,24,243	0/0:11,0:11:30.57:0,31,500	0/0:9,0:9:21.07:0,21,383	1/1:19,0:19:31:450,31,0	0/0:1,0:1:3.01:0,3,66	0/0:7,0:7:21.07:0,21,417	1/1:13,0:13:26.97:230,27,0	1/1:10,0:10:13.70:114,14,0	0/0:14,0:14:38.83:0,39,430	0/0:7,0:7:5.55:0,6,63	0/0:18,0:18:28:0,28,344	0/0:5,0:5:12.03:0,12,181	0/0:13,0:13:39.12:0,39,603	0/0:21,0:21:53.76:0,54,824	1/1:8,2:10:9.64:225,10,0	0/0:18,0:18:48.03:0,48,545	0/0:12,0:12:32.01:0,32,282	0/0:2,0:2:6.01:0,6,73
chr10	53621327	.	GA	G	6473.85	PASS	AB=1.000;AC=33;AF=0.589;AN=56;BaseQRankSum=10.305;DP=651;FS=5.643;HRun=11;HaplotypeScore=63.7460;InbreedingCoeff=0.9173;MQ=60.82;MQ0=4;MQRankSum=0.511;QD=16.99;ReadPosRankSum=3.757;VQSLOD=5.9361;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,1:42:99:0,102,1042	0/0:9,0:9:20.32:0,20,250	0/1:16,0:9:14.48:14,0,78	0/0:15,0:7:12.75:0,13,135	1/1:3,25:28:68.86:565,69,0	1/1:5,23:28:56.92:468,57,0	1/1:4,9:13:26.96:222,27,0	0/0:29,0:28:69.16:0,69,723	1/1:2,18:20:38.95:320,39,0	1/1:5,11:16:32.94:271,33,0	1/1:5,16:22:45.99:356,46,0	0/0:12,0:12:29.90:0,30,296	0/0:21,0:20:47.99:0,48,493	1/1:3,12:15:29.86:238,30,0	0/0:39,1:39:68.57:0,69,913	0/0:25,0:25:63.15:0,63,664	1/1:2,26:29:67.94:544,68,0	1/1:2,24:25:68.92:567,69,0	1/1:2,13:14:32.66:267,33,0	1/1:7,23:29:64.71:522,65,0	1/1:3,13:15:35.95:296,36,0	0/0:29,1:32:58.93:0,59,774	0/0:19,0:20:47.80:0,48,459	0/0:24,0:24:66.16:0,66,696	1/1:2,23:22:9.99:288,10,0	1/1:5,25:29:74.88:616,75,0	1/1:4,28:33:73.92:594,74,0	1/1:2,14:17:40.98:326,41,0
chr10	53622373	.	A	ATAT	2166.26	PASS	AB=1.000;AC=20;AF=0.370;AN=54;BaseQRankSum=-4.957;DP=246;FS=0.000;HRun=0;HaplotypeScore=32.0621;InbreedingCoeff=0.6109;MQ=66.73;MQ0=1;MQRankSum=2.501;QD=19.69;ReadPosRankSum=1.510;VQSLOD=2.6903;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:29.22:0,29,695	0/0:3,0:3:6.02:0,6,100	0/0:4,0:4:8.99:0,9,83	0/0:6,0:6:4.99:0,5,63	0/0:7,0:7:5.69:0,6,125	0/1:4,0:4:9.21:9,0,65	0/0:3,0:3:9:0,9,81	0/0:28,0:28:72.05:0,72,700	0/1:4,0:4:32.98:35,0,33	1/1:5,0:5:15.02:141,15,0	1/1:10,0:10:20.53:153,21,0	0/0:6,0:6:11.99:0,12,112	0/0:4,0:4:11.97:0,12,97	0/0:6,0:6:9.76:0,10,65	0/0:9,0:9:26.99:0,27,256	0/0:4,0:4:5.99:0,6,72	0/0:25,0:24:28.73:0,29,341	0/1:8,0:8:2.59:3,0,70	1/1:1,10:11:30:338,30,0	1/1:2,12:14:26.42:212,26,0	1/1:2,8:10:9.03:204,9,0	./.	0/0:3,0:3:9.02:0,9,91	0/0:3,0:3:5.95:0,6,42	0/1:7,0:7:1.21:1,0,116	1/1:0,4:4:12.01:185,12,0	1/1:0,13:15:18.06:397,18,0	1/1:1,17:17:30.10:678,30,0
chr10	53622374	.	T	TATAATAATA	1002.04	PASS	AB=1.000;AC=17;AF=0.386;AN=44;BaseQRankSum=-0.256;DP=251;FS=9.543;HRun=0;HaplotypeScore=66.5438;InbreedingCoeff=0.5420;MQ=65.66;MQ0=1;MQRankSum=-2.179;QD=11.52;ReadPosRankSum=-2.794;VQSLOD=-0.0270;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:22:31.32:0,31,736	0/0:3,0:3:9.02:0,9,188	./.	./.	1/1:5,0:7:6.02:107,6,0	1/1:3,0:5:3.01:57,3,0	./.	0/0:29,0:29:21.06:0,21,272	1/1:4,0:4:5.34:22,5,0	./.	1/1:3,0:11:8.86:120,9,0	0/0:3,0:6:6.02:0,6,126	0/0:4,0:4:2.84:0,3,14	1/1:4,0:6:6.02:199,6,0	0/0:9,0:9:6.02:0,6,121	0/0:3,0:3:3.01:0,3,82	1/1:19,6:31:12.01:450,12,0	1/1:3,0:7:9.03:131,9,0	0/0:12,0:12:0.24:0,0,17	0/0:12,0:12:2.94:0,3,18	0/1:7,0:7:9.84:10,0,11	./.	0/0:1,0:3:6.02:0,6,126	./.	1/1:5,0:8:3.01:57,3,0	0/0:4,0:4:5.92:0,6,40	0/0:15,0:15:14.79:0,15,98	0/0:20,0:19:29.28:0,29,174
chr10	53623847	.	G	GACAC	1018.62	PASS	AB=1.000;AC=22;AF=0.423;AN=52;BaseQRankSum=3.612;DP=686;FS=3.755;HRun=0;HaplotypeScore=158.0882;InbreedingCoeff=0.5663;MQ=55.31;MQ0=13;MQRankSum=-1.830;QD=3.32;ReadPosRankSum=-4.241;VQSLOD=1.4141;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:44:55.86:0,56,1037	0/0:4,0:6:1.89:0,2,112	./.	./.	1/1:16,0:15:6.03:62,6,0	1/1:12,0:12:1.14:3,1,0	1/1:25,0:23:7.67:52,8,0	1/1:31,0:28:21.37:148,21,0	1/1:16,0:16:12.33:71,12,0	0/1:27,0:25:40.15:43,0,40	0/0:22,0:22:2.75:0,3,26	0/0:22,0:26:51.11:0,51,664	0/0:18,0:18:36.09:0,36,511	1/1:20,0:19:14.40:132,14,0	0/0:23,0:23:28.25:0,28,515	0/0:16,0:19:24.04:0,24,294	1/1:13,15:31:14:236,14,0	1/1:6,9:16:6.02:145,6,0	0/1:16,0:15:31.88:60,0,32	0/0:27,0:26:7.67:0,8,56	1/1:53,0:52:21.50:185,22,0	0/0:24,0:29:53.57:0,54,621	0/0:27,0:27:31.56:0,32,651	0/0:39,0:42:44.34:0,44,967	0/1:17,0:16:0.20:0,0,0	0/1:27,0:26:32.12:62,0,32	0/0:21,0:20:15:0,15,131	0/0:8,0:8:6.47:0,6,53
chr10	53623868	.	ACACACACG	A	2375.24	PASS	AB=0.996;AC=18;AF=0.321;AN=56;BaseQRankSum=4.164;DP=762;FS=24.254;HRun=0;HaplotypeScore=202.2740;InbreedingCoeff=0.4705;MQ=52.14;MQ0=23;MQRankSum=1.284;QD=7.07;ReadPosRankSum=-4.888;VQSLOD=-0.4847;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:85.28:0,85,2949	0/0:9,0:9:24.07:0,24,528	0/1:36,0:7:12.03:16,0,12	0/0:43,0:6:11.88:0,12,114	0/0:23,0:22:4.85:0,5,250	0/0:15,0:15:17.58:0,18,259	0/0:31,0:29:47.47:0,47,672	0/1:39,0:37:99:261,0,232	0/1:20,0:20:13.90:14,0,532	1/1:22,0:20:43.17:364,43,0	1/1:22,1:23:5.94:51,6,0	0/0:25,0:25:53.80:0,54,1727	0/0:19,0:19:54.11:0,54,1460	0/0:19,0:18:23.66:0,24,474	0/0:22,0:22:39.16:0,39,1699	0/0:16,0:16:42.01:0,42,793	0/0:38,0:38:50.25:0,50,757	0/0:15,0:15:17.98:0,18,329	1/1:17,0:16:10.61:247,11,0	0/1:32,0:31:44.90:45,0,70	1/1:59,0:57:61.35:599,61,0	0/0:31,0:31:59.35:0,59,1814	0/0:29,0:29:71.91:0,72,1844	0/0:41,0:41:46.45:0,46,2721	0/1:13,0:12:13.62:14,0,54	1/1:37,0:37:61.02:549,61,0	1/1:5,18:23:24.37:371,24,0	0/1:14,0:14:27.64:35,0,28
chr10	53623870	.	ACACACG	A	4013.69	PASS	AB=1.000;AC=20;AF=0.357;AN=56;BaseQRankSum=4.363;DP=769;FS=19.808;HRun=0;HaplotypeScore=178.6418;InbreedingCoeff=0.6593;MQ=53.88;MQ0=23;MQRankSum=0.554;QD=11.98;ReadPosRankSum=-4.169;VQSLOD=0.5791;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:88.22:0,88,2435	0/0:9,0:9:23.54:0,24,419	0/1:39,0:9:10.83:11,0,34	0/0:43,0:6:11.67:0,12,91	0/0:24,0:23:7.90:0,8,231	0/0:14,0:14:17.58:0,18,194	0/0:31,0:29:42.26:0,42,513	0/1:39,0:37:99:343,0,136	0/1:19,0:19:13.91:14,0,450	1/1:20,1:19:39.41:473,39,0	1/1:4,20:24:5.65:85,6,0	0/0:27,0:27:59.78:0,60,1406	0/0:19,0:19:54.05:0,54,1176	0/0:20,0:19:26.65:0,27,386	0/0:23,0:23:42.16:0,42,1424	0/0:17,0:17:44.98:0,45,663	0/0:38,0:38:50.25:0,50,673	0/0:17,0:17:23.92:0,24,319	1/1:3,14:16:36.23:445,36,0	1/1:6,25:30:20.35:167,20,0	1/1:58,0:56:87.32:878,87,0	0/0:32,0:32:65.15:0,65,1492	0/0:28,0:28:72.08:0,72,1533	0/0:42,0:42:33.06:0,33,2154	0/1:13,0:12:13.51:14,0,54	1/1:3,33:36:85.14:990,85,0	1/1:18,4:21:26.74:419,27,0	1/1:0,16:16:11.93:175,12,0
chr10	53623872	.	ACACG	A	3070.31	PASS	AB=1.000;AC=22;AF=0.393;AN=56;BaseQRankSum=6.346;DP=771;FS=20.155;HRun=0;HaplotypeScore=158.7844;InbreedingCoeff=0.5475;MQ=54.01;MQ0=22;MQRankSum=1.276;QD=7.85;ReadPosRankSum=-4.146;VQSLOD=0.2081;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:91.29:0,91,1920	0/0:10,0:10:3.04:0,3,291	0/1:39,0:8:9.97:10,0,39	0/0:44,0:7:7.83:0,8,66	0/1:25,0:24:0.94:1,0,182	0/0:14,0:14:17.60:0,18,135	0/1:32,0:30:1.71:2,0,426	0/1:41,0:39:83.39:388,0,83	0/1:19,0:19:11.01:11,0,324	1/1:21,0:19:41.17:391,41,0	1/1:24,0:24:5.53:52,6,0	0/0:28,0:28:62.21:0,62,1092	0/0:19,0:19:54.49:0,54,913	0/0:19,0:18:26.17:0,26,320	0/0:23,0:23:42.13:0,42,1121	0/0:17,0:17:44.92:0,45,542	0/0:38,0:38:53.22:0,53,583	0/0:18,0:18:26.89:0,27,271	1/1:17,0:16:44.73:378,45,0	1/1:28,3:30:20.81:223,21,0	1/1:55,1:54:91.27:743,91,0	0/0:32,0:32:64.25:0,64,1149	0/0:28,0:28:75.05:0,75,1268	0/0:40,0:40:4.62:0,5,1626	0/1:13,0:12:13.37:13,0,54	1/1:35,0:35:81.70:684,82,0	1/1:22,0:21:26.81:261,27,0	1/1:16,0:16:11.93:109,12,0
chr10	53623876	.	G	GCA	699.45	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=0.098;DP=769;FS=4.604;HRun=0;HaplotypeScore=149.7082;InbreedingCoeff=0.4090;MQ=54.46;MQ0=21;MQRankSum=3.376;QD=4.34;ReadPosRankSum=-2.219;VQSLOD=2.4290;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,103,1252	0/0:12,0:12:24.99:0,25,266	0/0:41,0:11:16.97:0,17,161	0/0:46,0:12:20.26:0,20,202	0/0:25,0:24:14.47:0,14,301	0/0:15,0:15:8.95:0,9,108	0/0:34,0:32:65.82:0,66,724	1/1:19,19:36:19.27:680,19,0	0/0:19,0:19:18.98:0,19,307	0/0:18,0:17:10.57:0,11,51	0/0:21,0:21:3.59:0,4,15	0/0:31,0:31:80.60:0,81,881	0/0:18,0:18:45.13:0,45,534	0/1:21,0:20:10.25:10,0,256	0/0:24,0:24:54.17:0,54,658	0/0:18,0:18:39.09:0,39,442	0/0:38,0:38:38.62:0,39,469	0/0:15,0:15:22.36:0,22,254	0/1:15,0:15:10.05:10,0,49	0/0:31,0:30:7.71:0,8,31	1/1:53,0:51:9.31:78,9,0	0/0:31,0:31:51.07:0,51,597	0/0:30,0:30:9.24:0,9,699	0/0:40,0:40:89.45:0,89,1034	0/0:13,0:12:11.97:0,12,145	0/1:34,0:34:13.53:54,0,14	0/0:22,0:21:17.06:0,17,70	0/0:16,0:16:5.60:0,6,26
chr10	53626888	.	CTCTATCTATCTATCTATCTA	C	4492.66	PASS	AB=0.828;AC=19;AF=0.339;AN=56;BaseQRankSum=7.587;DP=553;FS=11.285;HRun=0;HaplotypeScore=282.1866;InbreedingCoeff=0.7847;MQ=63.63;MQ0=4;MQRankSum=-5.124;QD=25.10;ReadPosRankSum=1.462;VQSLOD=1.9386;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:39.11:0,39,2115	0/0:9,0:9:21.07:0,21,1470	0/0:25,0:22:9.03:0,9,121	0/1:18,0:16:3.84:4,0,44	0/0:29,0:29:48.16:0,48,3012	0/0:19,0:17:36.11:0,36,2412	0/0:17,0:17:45.14:0,45,2374	0/0:31,0:30:48.16:0,48,1256	0/0:22,0:22:48.16:0,48,2721	1/1:4,5:9:15.05:562,15,0	0/1:6,8:14:0:0,0,1	0/0:20,0:20:42.14:0,42,2448	0/0:17,0:17:48.16:0,48,2845	0/0:17,0:17:36.12:0,36,2491	0/0:34,0:34:81.28:0,81,5947	0/0:20,0:20:42.14:0,42,2416	1/1:14,1:14:14.84:434,15,0	1/1:8,0:8:12.04:311,12,0	1/1:5,3:8:9.03:281,9,0	1/1:18,3:21:18.06:319,18,0	1/1:27,0:27:17.31:355,17,0	0/0:24,0:24:69.21:0,69,3326	0/0:20,0:20:48.16:0,48,2434	0/0:7,0:12:27.09:0,27,1421	0/0:32,0:32:63.21:0,63,3940	0/1:18,4:22:28.80:1024,0,29	1/1:12,19:31:21:980,21,0	1/1:5,1:6:6.02:223,6,0
chr10	53626914	.	CT	C	1029.30	PASS	AB=0.834;AC=10;AF=0.179;AN=56;BaseQRankSum=9.629;DP=497;FS=12.397;HRun=1;HaplotypeScore=91.7314;InbreedingCoeff=-0.2102;MQ=51.60;MQ0=5;MQRankSum=-4.966;QD=7.92;ReadPosRankSum=0.070;VQSLOD=-0.3728;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:49.06:0,49,789	0/0:11,0:11:30.10:0,30,465	0/0:7,0:3:9.03:0,9,121	0/1:4,0:3:3.06:3,0,80	0/0:19,0:19:51.17:0,51,799	0/0:15,0:13:36.11:0,36,550	0/0:17,0:17:51.16:0,51,780	0/0:41,0:35:99:0,105,1547	0/0:26,0:26:69.23:0,69,1064	0/1:8,0:8:68.18:121,0,68	0/0:11,0:11:6.02:0,6,88	0/0:17,0:17:48.14:0,48,714	0/0:19,0:19:57.19:0,57,888	0/0:21,0:21:57.19:0,57,881	0/0:37,0:37:99:0,99,1535	0/0:21,0:21:57.19:0,57,885	0/1:10,4:13:66.53:169,0,67	0/1:5,3:8:99:109,0,124	0/1:5,0:4:32.63:80,0,33	0/1:13,9:22:99:213,0,266	0/1:9,12:21:16.90:192,0,17	0/0:25,0:25:75.23:0,75,1129	0/0:18,0:18:51.17:0,51,796	0/0:15,0:14:19.57:0,20,235	0/0:22,0:22:63.19:0,63,977	0/1:11,6:17:99:233,0,258	0/1:28,0:28:9.87:10,0,275	0/1:2,1:3:35.65:41,0,36
chr10	53627024	.	CATCTATCT	C	6085.46	PASS	AB=0.655;AC=33;AF=0.660;AN=50;BaseQRankSum=-1.448;DP=597;FS=3.261;HRun=0;HaplotypeScore=183.8194;InbreedingCoeff=0.7378;MQ=60.68;MQ0=1;MQRankSum=-4.430;QD=15.93;ReadPosRankSum=-0.810;VQSLOD=3.7460;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:23:17.94:0,18,141	1/1:0,6:6:12.04:282,12,0	./.	./.	1/1:7,0:19:2.55:55,3,0	1/1:15,0:28:21.07:391,21,0	./.	0/0:38,0:37:5.80:0,6,34	1/1:13,1:29:30.06:490,30,0	1/1:11,17:28:47.32:1001,47,0	0/0:15,16:31:2.96:0,3,19	0/0:13,0:21:35.91:0,36,292	0/0:10,0:14:8.98:0,9,73	1/1:5,0:18:9.03:165,9,0	1/1:11,21:33:24.08:540,24,0	1/1:10,8:18:15.05:369,15,0	1/1:10,0:20:5.86:112,6,0	0/1:9,0:19:18.60:156,0,19	1/1:9,6:15:17.98:288,18,0	1/1:15,10:25:5.98:93,6,0	1/1:13,0:13:11.97:225,12,0	0/0:8,0:15:17.96:0,18,148	0/0:13,0:23:23.93:0,24,193	0/0:6,0:11:14.72:0,15,109	1/1:10,0:25:9.03:144,9,0	1/1:13,18:31:50.65:795,51,0	1/1:29,12:41:42.10:855,42,0	1/1:11,2:13:9:124,9,0
chr10	53627204	.	CT	C	7792.66	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=12.642;DP=720;FS=4.608;HRun=1;HaplotypeScore=69.7663;InbreedingCoeff=0.9983;MQ=83.87;MQ0=0;MQRankSum=-2.802;QD=38.01;ReadPosRankSum=3.318;VQSLOD=5.5754;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,120,1886	0/0:8,0:8:24.05:0,24,358	0/0:15,0:15:42.14:0,42,669	0/0:29,0:29:78.22:0,78,1216	1/1:0,28:28:78.26:1090,78,0	1/1:1,25:26:72.24:998,72,0	1/1:0,23:23:51.17:713,51,0	0/0:29,0:29:87.30:0,87,1363	1/1:0,23:23:60.20:839,60,0	0/0:20,0:20:60.20:0,60,953	0/0:18,0:18:54.17:0,54,832	0/0:36,0:36:99:0,108,1703	0/0:28,0:28:84.29:0,84,1336	1/1:0,25:25:75.25:1048,75,0	0/0:39,0:39:99:0,117,1868	0/0:27,0:27:81.24:0,81,1240	1/1:0,26:26:75.25:1049,75,0	1/1:0,19:19:45.15:629,45,0	0/0:15,0:15:39.13:0,39,623	0/0:31,0:31:93.28:0,93,1429	0/0:33,0:33:99:0,99,1512	0/0:30,0:30:90.31:0,90,1439	0/0:26,0:26:75.26:0,75,1199	0/0:24,0:24:72.23:0,72,1127	1/1:0,35:35:99:1427,102,0	0/0:27,0:26:81.28:0,81,1295	0/0:34,0:34:99:0,99,1582	0/0:6,0:6:18.06:0,18,288
chr10	53629180	.	C	CGG	107.89	PASS	AB=0.571;AC=1;AF=0.25;AN=4;BaseQRankSum=-1.580;DP=21;FS=19.243;HRun=0;HaplotypeScore=19.8127;MQ=188.48;MQ0=0;MQRankSum=-0.296;QD=13.49;ReadPosRankSum=0.895;VQSLOD=1.5184;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/1:2,4:8:21.96:170,0,22	0/0:5,0:5:5.65:0,6,57	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.
chr10	53631048	.	TC	T	5545.75	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=13.528;DP=730;FS=1.071;HRun=3;HaplotypeScore=83.3711;InbreedingCoeff=0.9998;MQ=77.02;MQ0=0;MQRankSum=-2.515;QD=32.43;ReadPosRankSum=3.791;VQSLOD=5.1951;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:90.28:0,90,1272	0/0:10,0:10:30.10:0,30,431	0/0:24,0:23:57.90:0,58,750	0/0:13,0:12:32.84:0,33,432	1/1:1,23:24:60.19:744,60,0	1/1:0,22:22:66.21:818,66,0	1/1:1,40:41:99:1302,105,0	0/0:27,0:27:75.23:0,75,1030	1/1:1,36:37:99:1269,104,0	0/0:26,0:26:75.25:0,75,1080	0/0:19,0:19:57.19:0,57,820	0/0:19,0:19:57.17:0,57,786	0/0:27,0:27:81.27:0,81,1165	1/1:3,27:30:75.23:930,75,0	0/0:30,0:30:87.27:0,87,1224	0/0:20,0:20:57.19:0,57,820	0/0:37,0:37:99:0,102,1469	0/0:24,0:24:69.23:0,69,993	0/0:24,0:23:72.24:0,72,1037	0/0:28,0:28:81.27:0,81,1165	0/0:40,0:40:99:0,120,1709	0/0:34,0:34:99:0,99,1405	0/0:29,0:29:84.28:0,84,1196	0/0:39,0:39:99:0,105,1493	1/1:0,17:17:39.12:484,39,0	0/0:22,0:22:66.22:0,66,945	0/0:22,0:22:63.21:0,63,907	0/0:11,0:11:33.11:0,33,475
chr10	53632522	.	T	TTG	740.43	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-4.355;DP=798;FS=0.000;HRun=0;HaplotypeScore=103.8643;InbreedingCoeff=0.9989;MQ=76.31;MQ0=1;MQRankSum=0.448;QD=21.16;ReadPosRankSum=-4.586;VQSLOD=2.9116;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:80.61:0,81,951	0/0:15,0:15:39.11:0,39,464	0/0:44,0:36:54.65:0,55,593	0/0:36,0:33:53.93:0,54,644	0/0:27,0:27:54.15:0,54,645	0/0:31,0:31:69.13:0,69,824	0/0:30,0:30:53.46:0,53,790	1/1:17,17:35:56.81:835,57,0	0/0:27,0:27:66.19:0,66,794	0/0:30,0:30:69.20:0,69,825	0/0:26,0:26:54.17:0,54,660	0/0:33,0:33:81.25:0,81,990	0/0:27,0:27:69.22:0,69,843	0/0:27,0:27:66.16:0,66,790	0/0:36,0:36:99:0,102,1247	0/0:21,0:21:51.16:0,51,623	0/0:32,0:32:87.27:0,87,1062	0/0:25,0:25:42.92:0,43,595	0/0:31,0:32:72.04:0,72,836	0/0:20,0:20:48.14:0,48,576	0/0:42,0:42:93.22:0,93,1094	0/0:22,0:22:54.17:0,54,660	0/0:27,0:27:69.18:0,69,808	0/0:19,0:19:57.18:0,57,696	0/0:17,0:18:44.64:0,45,502	0/0:31,0:31:60.18:0,60,724	0/0:38,0:38:96.29:0,96,1161	0/0:10,0:10:27.08:0,27,328
chr10	53634671	.	A	AG	15323.28	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-1.459;DP=771;FS=3.959;HRun=4;HaplotypeScore=85.3843;InbreedingCoeff=0.9993;MQ=81.20;MQ0=0;MQRankSum=-3.266;QD=35.39;ReadPosRankSum=1.601;VQSLOD=5.1765;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,156,1747	0/0:7,0:7:21.05:0,21,230	0/0:24,0:24:49.65:0,50,563	0/0:19,0:19:48.11:0,48,532	1/1:1,24:25:60.20:818,60,0	1/1:2,15:17:39.13:533,39,0	1/1:1,27:28:72.24:985,72,0	1/1:1,29:30:87.27:1173,87,0	1/1:1,32:33:87.29:1190,87,0	1/1:3,34:37:99:1320,102,0	1/1:2,19:21:48.12:635,48,0	0/0:18,0:18:51.11:0,51,559	0/0:45,0:45:99:0,126,1381	1/1:2,24:26:66.22:903,66,0	0/0:36,0:36:99:0,108,1216	0/0:37,0:37:99:0,111,1243	1/1:3,18:21:48.16:657,48,0	1/1:2,15:17:42.14:572,42,0	1/1:5,17:22:54.17:720,54,0	1/1:0,29:29:81.27:1107,81,0	1/1:0,33:33:96.32:1313,96,0	0/0:37,0:37:99:0,102,1150	0/0:26,0:25:69.19:0,69,781	0/0:34,0:34:99:0,99,1088	1/1:2,24:26:63.21:860,63,0	1/1:1,29:30:87.29:1188,87,0	1/1:2,27:29:72.24:984,72,0	1/1:1,8:9:27.09:366,27,0
chr10	53635202	.	A	AACACAC	3071.64	PASS	AB=0.811;AC=34;AF=0.654;AN=52;BaseQRankSum=0.853;DP=551;FS=10.386;HRun=0;HaplotypeScore=135.3045;InbreedingCoeff=0.5300;MQ=64.71;MQ0=14;MQRankSum=-2.277;QD=8.46;ReadPosRankSum=-2.698;VQSLOD=1.5910;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:34:12.04:0,12,168	0/0:7,0:7:3.48:0,3,61	./.	./.	1/1:24,0:24:5.80:81,6,0	1/1:17,3:21:6.02:140,6,0	1/1:23,0:26:4.75:112,5,0	1/1:17,0:17:6.02:103,6,0	1/1:21,0:21:8.95:217,9,0	1/1:20,0:23:18.95:411,19,0	1/1:9,0:10:3.01:78,3,0	0/0:11,0:11:3.01:0,3,60	0/0:12,0:13:10.96:0,11,221	1/1:22,0:22:8.98:233,9,0	0/1:21,0:21:15.75:16,0,111	0/0:13,0:16:9.92:0,10,146	0/1:11,1:27:52.02:67,0,52	1/1:12,0:25:14.06:171,14,0	1/1:10,0:10:3.01:68,3,0	1/1:21,0:21:9.03:249,9,0	1/1:13,0:15:6.02:140,6,0	0/0:20,0:19:3.01:0,3,60	0/0:15,0:17:14.81:0,15,280	0/0:16,0:16:20.80:0,21,359	1/1:19,1:21:6.02:156,6,0	1/1:16,0:21:31.11:502,31,0	1/1:13,2:22:9.02:208,9,0	1/1:7,0:9:12.04:294,12,0
chr10	53635465	.	C	CCT	8611.67	PASS	AC=18;AF=0.333;AN=54;BaseQRankSum=-13.445;DP=706;FS=4.378;HRun=0;HaplotypeScore=86.1381;InbreedingCoeff=0.9966;MQ=87.29;MQ0=1;MQRankSum=-0.599;QD=37.12;ReadPosRankSum=2.419;VQSLOD=7.2722;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:56:99:0,150,1895	0/0:7,0:7:21.07:0,21,267	0/0:28,0:27:21.49:0,21,664	0/0:31,0:31:66.17:0,66,797	1/1:4,22:26:59.93:999,60,0	1/1:2,19:21:48.16:803,48,0	1/1:5,19:25:15.99:815,16,0	1/1:10,20:31:64.45:1028,64,0	1/1:6,23:29:34.05:1116,34,0	0/0:15,0:15:36.11:0,36,447	0/0:21,0:21:48.13:0,48,585	0/0:28,0:28:81.26:0,81,1031	0/0:21,0:21:57.18:0,57,725	1/1:3,29:32:75.26:1241,75,0	0/0:36,0:36:99:0,102,1285	0/0:25,0:25:69.21:0,69,863	1/1:3,24:28:63.22:1054,63,0	1/1:2,18:20:54.18:904,54,0	0/0:32,0:32:66.20:0,66,829	0/0:21,0:21:51.16:0,51,649	0/0:30,0:30:78.23:0,78,978	0/0:15,0:15:36.07:0,36,436	0/0:20,0:20:48.09:0,48,567	0/0:29,0:29:81.23:0,81,1004	1/1:6,14:20:39.13:652,39,0	0/0:25,0:25:57.17:0,57,711	0/0:32,0:31:78.25:0,78,993	./.
chr10	53637759	.	GA	G	6964.63	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=13.741;DP=743;FS=2.048;HRun=7;HaplotypeScore=74.5319;InbreedingCoeff=0.9995;MQ=78.63;MQ0=1;MQRankSum=-4.950;QD=26.89;ReadPosRankSum=0.922;VQSLOD=5.5911;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,117,1470	0/0:10,0:10:30.10:0,30,377	0/0:14,0:14:23.63:0,24,306	0/0:27,0:26:46.94:0,47,532	1/1:1,30:31:87.19:887,87,0	1/1:2,29:31:84.19:857,84,0	1/1:3,25:28:66.15:673,66,0	1/1:4,24:28:69.14:697,69,0	1/1:1,22:23:63.14:643,63,0	0/0:27,0:27:69.22:0,69,868	0/0:23,0:23:60.19:0,60,755	0/0:31,0:31:87.25:0,87,1058	0/0:25,0:25:72.21:0,72,890	1/1:3,24:27:34.43:666,34,0	0/0:24,0:24:69.22:0,69,866	0/0:28,0:28:78.24:0,78,970	1/1:3,26:29:78.17:796,78,0	1/1:1,26:27:75.17:765,75,0	0/0:28,0:28:78.23:0,78,965	0/0:22,0:22:60.18:0,60,742	0/0:20,0:20:57.17:0,57,703	0/0:23,0:23:69.22:0,69,868	0/0:29,0:29:84.22:0,84,1025	0/0:27,0:27:75.24:0,75,943	1/1:1,34:35:96.22:980,96,0	0/0:40,0:40:99:0,120,1499	0/0:32,1:33:65.67:0,66,1120	0/0:12,0:12:30.10:0,30,377
chr10	53637905	.	G	GGC	11464.66	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-16.514;DP=656;FS=3.096;HRun=0;HaplotypeScore=73.8739;InbreedingCoeff=0.9998;MQ=86.50;MQ0=1;MQRankSum=-1.007;QD=51.41;ReadPosRankSum=4.374;VQSLOD=5.6995;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,114,1703	0/0:10,0:10:30.09:0,30,438	0/0:18,0:18:51.14:0,51,739	0/0:25,0:25:64.79:0,65,947	1/1:0,24:24:60.21:1156,60,0	1/1:1,29:31:75.26:1441,75,0	1/1:0,26:27:75.26:1447,75,0	1/1:1,21:22:63.21:1168,63,0	1/1:0,21:21:57.20:1099,57,0	0/0:14,0:14:39.13:0,39,570	0/0:22,0:22:60.19:0,60,896	0/0:26,0:26:72.24:0,72,1093	0/0:26,0:26:78.25:0,78,1170	1/1:1,20:21:51.17:984,51,0	0/0:20,0:20:54.18:0,54,810	0/0:11,0:11:33.11:0,33,505	1/1:0,36:36:96.33:1852,96,0	1/1:0,22:22:63.22:1217,63,0	0/0:26,0:26:78.24:0,78,1166	0/0:30,0:30:90.29:0,90,1353	0/0:39,0:38:99:0,111,1649	0/0:22,0:22:60.19:0,60,898	0/0:15,0:15:39.12:0,39,576	0/0:36,0:36:99:0,108,1616	1/1:0,19:19:57.20:1101,57,0	0/0:29,0:29:84.28:0,84,1277	0/0:13,0:13:39.08:0,39,550	0/0:13,0:13:36.05:0,36,482
chr10	53639008	.	GT	G	8674.80	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=15.794;DP=778;FS=2.386;HRun=2;HaplotypeScore=77.9599;InbreedingCoeff=0.9996;MQ=92.31;MQ0=0;MQRankSum=-4.870;QD=35.70;ReadPosRankSum=0.518;VQSLOD=5.3411;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,159,2270	0/0:10,0:10:30.10:0,30,447	0/0:32,0:32:79.77:0,80,1153	0/0:34,0:34:81.05:0,81,1141	1/1:0,30:30:87.28:1126,87,0	1/1:1,25:26:72.23:935,72,0	1/1:0,30:30:75.24:974,75,0	1/1:0,30:30:90.21:1103,90,0	1/1:0,32:32:87.28:1129,87,0	0/0:38,0:38:99:0,111,1603	0/0:17,0:17:51.16:0,51,746	0/0:33,0:33:96.33:0,96,1436	0/0:30,0:30:89.67:0,90,1309	1/1:0,34:34:90.25:1149,90,0	0/0:29,0:29:84.25:0,84,1200	0/0:29,0:29:87.29:0,87,1286	1/1:0,26:26:75.24:973,75,0	1/1:1,12:13:36.12:467,36,0	0/0:27,0:27:81.22:0,81,1134	0/0:32,0:32:93.29:0,93,1346	0/0:38,0:38:99:0,114,1678	0/0:15,0:15:45.15:0,45,674	0/0:30,0:30:87.28:0,87,1282	0/0:19,0:19:57.18:0,57,827	1/1:1,21:22:63.20:818,63,0	0/0:31,0:31:90.30:0,90,1330	0/0:29,0:29:84.26:0,84,1221	0/0:8,0:8:24.08:0,24,360
chr10	53639868	.	AG	A	6548.99	PASS	AB=1.000;AC=28;AF=0.500;AN=56;BaseQRankSum=4.739;DP=471;FS=6.458;HRun=1;HaplotypeScore=78.6531;InbreedingCoeff=0.5474;MQ=61.26;MQ0=0;MQRankSum=-0.788;QD=20.15;ReadPosRankSum=-5.115;VQSLOD=3.2699;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:72.11:0,72,945	0/0:6,0:6:18.03:0,18,212	0/0:10,0:10:30.07:0,30,365	0/0:11,0:8:16.19:0,16,188	0/1:22,0:21:15.70:117,0,16	0/1:15,0:15:7.11:127,0,7	0/1:7,0:7:18.68:23,0,19	1/1:24,0:21:2.48:170,2,0	0/1:16,0:16:8.61:69,0,9	1/1:5,14:19:49.15:661,49,0	1/1:7,10:17:38.92:515,39,0	0/0:23,0:23:69.17:0,69,874	0/0:16,0:16:48.12:0,48,617	1/1:20,0:20:13.59:162,14,0	0/0:10,0:10:27.08:0,27,352	0/0:17,0:17:31.20:0,31,617	0/1:23,0:23:26.93:84,0,27	0/1:18,0:17:21.24:77,0,21	1/1:7,18:23:64.59:858,65,0	1/1:1,20:21:62.92:708,63,0	1/1:1,17:17:45.15:626,45,0	0/0:9,0:9:21.05:0,21,261	0/0:13,0:13:34.73:0,35,469	0/0:5,0:5:15.04:0,15,188	1/1:19,0:19:6.53:189,7,0	1/1:0,19:19:57.15:743,57,0	1/1:6,23:29:87.21:1128,87,0	1/1:0,13:13:21.07:292,21,0
chr10	53640986	.	C	CAAAAA	8931.25	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=5.718;DP=721;FS=10.431;HRun=8;HaplotypeScore=146.4424;InbreedingCoeff=0.9843;MQ=79.02;MQ0=0;MQRankSum=-8.498;QD=38.66;ReadPosRankSum=-6.024;VQSLOD=0.2127;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,117,1935	0/0:9,0:9:21.06:0,21,360	0/0:24,0:23:38.74:0,39,587	0/0:18,0:18:22.20:0,22,299	1/1:15,17:39:75.26:1804,75,0	1/1:11,9:29:54.18:1267,54,0	1/1:9,8:21:45.14:1042,45,0	1/1:11,0:38:93.16:997,93,0	1/1:10,6:20:33.11:769,33,0	0/0:30,0:30:78.21:0,78,1336	0/0:24,0:24:60.15:0,60,1001	0/0:21,0:21:51.09:0,51,841	0/0:28,0:28:6.89:0,7,1066	1/1:6,6:15:24.08:595,24,0	0/0:23,0:23:66.19:0,66,1096	0/0:29,0:29:78.21:0,78,1309	1/1:4,0:21:42.02:447,42,0	1/1:3,0:15:29.26:376,29,0	0/0:29,0:29:81.20:0,81,1278	0/0:36,0:36:99:0,105,1760	0/0:11,0:11:24.04:0,24,403	0/0:22,0:22:60.17:0,60,1002	0/0:38,0:38:99:0,105,1753	0/0:15,0:15:45.13:0,45,742	1/1:9,13:32:66.23:1636,66,0	0/0:26,0:26:69.21:0,69,1182	0/0:28,0:28:81.26:0,81,1387	0/0:38,0:38:99:0,111,1900
chr10	53641287	.	TTCTCTCTC	T	168.39	PASS	AB=0.950;AC=3;AF=0.068;AN=44;BaseQRankSum=1.648;DP=686;FS=0.000;HRun=0;HaplotypeScore=157.0263;InbreedingCoeff=0.2721;MQ=67.54;MQ0=27;MQRankSum=-1.418;QD=3.58;ReadPosRankSum=1.418;VQSLOD=2.6645;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:7.25:0,7,70	./.	0/0:50,0:23:0:0,0,0	./.	./.	0/0:17,0:17:6.02:0,6,97	0/0:22,0:20:2.60:0,3,10	0/0:37,0:35:14.20:0,14,91	0/0:22,0:22:21.06:0,21,565	0/0:20,0:20:5.23:0,5,74	0/0:26,0:26:3:0,3,25	0/0:17,0:18:9.03:0,9,244	0/1:18,0:18:57.59:58,0,58	0/0:15,0:14:9.03:0,9,339	0/0:19,0:18:9.03:0,9,274	0/0:22,0:22:9:0,9,191	0/0:24,0:22:15.05:0,15,526	0/0:14,0:14:6:0,6,144	0/0:22,0:22:10.27:0,10,105	./.	0/0:44,0:43:2.88:0,3,15	./.	./.	0/0:18,0:19:6.02:0,6,130	0/0:25,0:23:12.04:0,12,457	0/0:21,0:21:0.47:0,0,1	1/1:23,4:26:7.88:201,8,0	0/0:19,0:18:5.23:0,5,76
chr10	53642939	.	AT	A	3212.23	PASS	AB=0.800;AC=15;AF=0.268;AN=56;BaseQRankSum=6.765;DP=656;FS=0.358;HRun=10;HaplotypeScore=90.1189;InbreedingCoeff=0.9434;MQ=71.34;MQ0=0;MQRankSum=-0.715;QD=18.25;ReadPosRankSum=-0.938;VQSLOD=3.6894;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:81.22:0,81,896	0/0:12,0:12:36.09:0,36,390	0/0:12,0:12:12.66:0,13,145	0/1:6,1:8:1.01:1,0,115	1/1:4,25:29:68.96:599,69,0	1/1:5,20:25:56.96:495,57,0	1/1:4,17:21:47.99:417,48,0	1/1:8,21:29:59.95:517,60,0	1/1:1,22:23:62.99:547,63,0	0/0:30,0:30:69.17:0,69,749	0/0:21,0:24:62.63:0,63,626	0/0:24,0:24:60.14:0,60,642	0/0:27,0:27:46.48:0,46,738	1/1:1,16:17:47.99:417,48,0	0/0:26,0:26:66.18:0,66,730	0/0:23,0:23:54.10:0,54,572	0/0:3,0:28:53.97:0,54,270	0/0:4,0:27:56.84:0,57,317	0/0:24,0:24:57.15:0,57,630	0/0:21,0:21:54.09:0,54,568	0/0:12,0:14:41.78:0,42,426	0/0:23,0:23:57.15:0,57,623	0/0:19,0:19:57.11:0,57,616	0/0:32,0:32:78.21:0,78,863	1/1:6,18:24:47.98:417,48,0	0/0:34,0:35:90.19:0,90,974	0/0:39,1:40:85.20:0,85,1145	0/0:11,0:11:30.08:0,30,332
chr10	53646985	.	TA	T	1971.01	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=11.178;DP=495;FS=3.223;HRun=6;HaplotypeScore=58.8075;InbreedingCoeff=0.9015;MQ=76.88;MQ0=1;MQRankSum=0.041;QD=25.60;ReadPosRankSum=-1.699;VQSLOD=3.0333;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:60.65:0,61,767	0/0:10,0:10:24.08:0,24,316	0/0:25,0:22:40.52:0,41,490	0/0:15,0:14:1.77:0,2,182	0/0:32,0:32:93.29:0,93,1208	0/0:15,0:15:36.10:0,36,458	0/0:6,0:6:18.06:0,18,237	1/1:5,28:33:84.17:890,84,0	0/0:11,0:11:21.07:0,21,276	0/0:21,0:21:60.19:0,60,776	0/0:18,0:18:51.17:0,51,670	0/0:14,0:14:39.12:0,39,499	0/0:17,0:17:45.14:0,45,577	0/0:15,0:15:36.12:0,36,471	0/0:16,0:16:45.15:0,45,589	0/0:12,0:12:33.11:0,33,434	1/1:0,19:19:51.13:547,51,0	1/1:1,24:25:63.16:676,63,0	0/0:19,0:19:51.16:0,51,657	0/0:22,0:22:63.20:0,63,824	0/0:7,0:7:15.05:0,15,197	0/0:10,0:10:27.09:0,27,353	0/0:16,0:16:42.14:0,42,553	0/0:4,0:4:9.03:0,9,118	0/0:25,0:25:63.18:0,63,810	0/0:30,0:30:87.27:0,87,1129	0/0:23,0:23:63.19:0,63,812	0/0:13,0:13:39.13:0,39,513
chr10	53647106	.	CA	C	4360.93	PASS	AB=0.800;AC=28;AF=0.500;AN=56;BaseQRankSum=1.547;DP=386;FS=3.979;HRun=9;HaplotypeScore=48.7288;InbreedingCoeff=0.8661;MQ=73.34;MQ0=1;MQRankSum=1.939;QD=20.00;ReadPosRankSum=3.948;VQSLOD=5.2039;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:38.89:0,39,418	0/0:6,0:6:18.05:0,18,208	0/1:24,0:13:1.83:2,0,158	0/0:15,0:10:10.61:0,11,158	1/1:3,25:28:69.03:631,69,0	1/1:1,15:16:33.02:302,33,0	1/1:0,6:6:18.01:165,18,0	0/0:6,0:28:68.43:0,68,443	1/1:2,14:16:39.02:357,39,0	1/1:1,8:9:24.01:220,24,0	1/1:2,8:10:24.01:220,24,0	0/0:4,0:4:9.03:0,9,104	0/0:13,0:13:39.10:0,39,439	1/1:1,7:9:17.04:143,17,0	0/0:12,0:12:36.11:0,36,415	0/0:10,0:10:21.06:0,21,242	0/0:7,0:21:49.65:0,50,273	0/0:6,0:12:19.92:0,20,101	1/1:0,21:21:63.02:572,63,0	1/1:2,20:22:57.02:522,57,0	0/1:1,2:3:17.37:21,0,17	0/0:8,0:8:24.07:0,24,277	0/0:17,0:17:51.11:0,51,566	0/0:8,0:8:21.06:0,21,242	1/1:0,11:11:21.01:192,21,0	1/1:2,15:17:45.02:412,45,0	1/1:1,18:19:45.02:411,45,0	1/1:0,7:7:21.01:192,21,0
chr10	53647136	.	CA	C	459	PASS	AB=0.920;AC=5;AF=0.089;AN=56;BaseQRankSum=3.895;DP=420;FS=0.710;HRun=10;HaplotypeScore=60.7814;InbreedingCoeff=0.6499;MQ=67.13;MQ0=5;MQRankSum=-4.343;QD=8.20;ReadPosRankSum=0.779;VQSLOD=1.7603;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,1:19:28.09:0,28,536	0/0:4,0:4:9.02:0,9,100	0/0:27,0:8:8.94:0,9,83	0/0:17,0:10:11.99:0,12,114	0/0:25,1:27:43.05:0,43,666	0/0:16,0:16:39.09:0,39,422	0/0:8,0:8:21.06:0,21,232	0/1:21,2:23:4:4,0,403	0/0:12,0:13:27.02:0,27,285	0/0:16,0:16:39.10:0,39,428	0/0:12,0:12:36.10:0,36,398	0/0:10,0:10:30.07:0,30,323	0/0:17,0:17:45.08:0,45,467	0/0:10,0:10:27.07:0,27,298	0/0:14,0:14:33.08:0,33,358	0/0:6,0:6:14.53:0,15,142	1/1:4,17:22:44.02:369,44,0	1/1:2,9:11:23.98:208,24,0	0/0:18,2:20:8.25:0,8,532	0/0:22,0:23:36.45:0,36,574	0/0:3,0:3:6.02:0,6,66	0/0:12,0:12:30.08:0,30,332	0/0:17,0:17:42.10:0,42,457	0/0:9,0:9:24.06:0,24,266	0/0:11,0:11:33.07:0,33,351	0/0:20,0:20:45.12:0,45,498	0/0:19,1:20:22.08:0,22,468	0/0:12,0:12:1.22:0,1,225
chr10	53647588	.	C	CA	3423.36	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-10.874;DP=637;FS=0.456;HRun=0;HaplotypeScore=64.1227;InbreedingCoeff=0.9991;MQ=83.11;MQ0=0;MQRankSum=-2.324;QD=45.64;ReadPosRankSum=-0.830;VQSLOD=3.3140;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,99,1366	0/0:11,0:11:33.10:0,33,444	0/0:23,0:21:57.45:0,57,746	0/0:24,0:22:60.18:0,60,806	0/0:31,0:31:87.73:0,88,1177	0/0:18,0:18:54.18:0,54,755	0/0:30,0:30:87.27:0,87,1197	1/1:0,32:32:96.31:1505,96,0	0/0:22,0:22:66.20:0,66,904	0/0:20,0:20:60.20:0,60,839	0/0:8,0:8:24.06:0,24,317	0/0:23,0:23:66.21:0,66,906	0/0:20,0:20:60.16:0,60,794	0/0:29,0:29:87.29:0,87,1215	0/0:32,0:32:96.30:0,96,1322	0/0:16,0:16:45.14:0,45,612	1/1:0,27:27:75.26:1199,75,0	1/1:0,16:16:45.15:719,45,0	0/0:22,0:22:66.22:0,66,922	0/0:18,0:18:54.18:0,54,755	0/0:50,0:50:99:0,144,1910	0/0:19,0:19:54.17:0,54,739	0/0:19,0:19:51.17:0,51,712	0/0:26,0:26:78.26:0,78,1091	0/0:16,0:16:45.15:0,45,628	0/0:16,0:16:48.15:0,48,656	0/0:22,0:20:62.85:0,63,840	0/0:13,0:13:39.13:0,39,545
chr10	53648567	.	GGTGTGTGTGTGTGT	G	4856.57	PASS	AB=0.779;AC=26;AF=0.500;AN=52;BaseQRankSum=9.100;DP=612;FS=3.737;HRun=0;HaplotypeScore=212.5759;InbreedingCoeff=0.7440;MQ=54.53;MQ0=20;MQRankSum=-5.067;QD=17.41;ReadPosRankSum=-1.342;VQSLOD=3.7906;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:32:48.61:0,49,2181	0/0:8,0:8:18.06:0,18,719	./.	./.	1/1:17,3:20:2.97:20,3,0	1/1:11,6:17:15.05:548,15,0	1/1:10,8:18:14.97:403,15,0	0/0:24,0:24:24.07:0,24,674	1/1:15,2:16:6.02:235,6,0	1/1:12,5:16:15.05:486,15,0	0/1:18,0:25:18.84:106,0,19	0/0:16,0:16:14.08:0,14,597	0/0:28,0:29:48.16:0,48,2364	1/1:8,7:15:6.02:235,6,0	0/0:16,0:22:33.11:0,33,1376	0/0:14,0:22:30.10:0,30,1362	0/0:21,0:30:24.08:0,24,1159	0/0:17,0:24:30.10:0,30,1504	0/1:20,7:26:8.05:358,0,8	1/1:7,8:16:21.03:482,21,0	1/1:19,1:20:6.02:86,6,0	0/0:14,0:14:24.08:0,24,1361	0/0:17,0:18:24.07:0,24,1035	0/0:46,0:46:72.70:0,73,3393	1/1:21,9:30:21.07:718,21,0	1/1:18,9:27:20.95:377,21,0	1/1:13,7:20:18.06:686,18,0	1/1:4,3:7:3.01:118,3,0
chr10	53649124	.	GAGA	G	6354.20	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=13.864;DP=680;FS=12.144;HRun=0;HaplotypeScore=98.2761;InbreedingCoeff=0.9694;MQ=82.05;MQ0=0;MQRankSum=-4.089;QD=39.47;ReadPosRankSum=1.753;VQSLOD=5.7901;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,120,2651	0/0:8,0:8:21.06:0,21,427	0/0:22,0:22:60.21:0,60,1254	0/0:15,0:16:42.14:0,42,854	0/0:27,0:27:75.22:0,75,1588	0/0:25,0:25:72.25:0,72,1585	0/0:44,0:44:99:0,129,2672	0/0:22,0:22:57.20:0,57,1251	0/0:22,0:22:63.22:0,63,1405	1/1:2,19:21:60.19:938,60,0	1/1:2,15:17:24.08:392,24,0	0/0:30,0:30:87.27:0,87,1833	0/0:34,0:34:93.31:0,93,2027	0/0:28,0:28:84.25:0,84,1824	0/0:23,0:23:66.21:0,66,1430	0/0:30,0:30:87.30:0,87,1938	0/0:37,0:37:99:0,105,2271	0/0:22,0:22:66.23:0,66,1463	1/1:3,19:22:57.19:911,57,0	1/1:0,27:27:66.23:1077,66,0	1/1:0,30:30:72.25:1175,72,0	0/0:19,0:19:57.20:0,57,1266	0/0:13,0:13:36.12:0,36,782	0/0:33,0:33:93.32:0,93,2049	0/0:24,0:24:69.24:0,69,1502	1/1:2,20:22:60.20:980,60,0	1/1:1,20:21:51.17:833,51,0	1/1:1,0:1:3.01:49,3,0
chr10	53649892	.	CA	C	2810.26	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=10.149;DP=796;FS=10.270;HRun=2;HaplotypeScore=75.6045;InbreedingCoeff=0.9985;MQ=82.31;MQ0=0;MQRankSum=-2.074;QD=34.69;ReadPosRankSum=-2.790;VQSLOD=2.1936;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,144,2073	0/0:15,0:15:45.13:0,45,652	0/0:28,0:28:75.25:0,75,1122	0/0:17,0:17:37.46:0,37,645	0/0:30,0:30:87.29:0,87,1304	0/0:21,0:21:60.19:0,60,878	0/0:30,0:30:90.29:0,90,1327	1/1:0,31:31:90.24:1123,90,0	0/0:25,0:25:69.23:0,69,1034	0/0:27,0:28:84.06:0,84,1192	0/0:25,0:25:75.25:0,75,1124	0/0:25,0:25:75.25:0,75,1124	0/0:31,0:31:93.31:0,93,1392	0/0:40,0:40:99:0,120,1794	0/0:28,0:28:84.28:0,84,1259	0/0:33,0:33:90.30:0,90,1349	1/1:0,32:32:87.28:1129,87,0	1/1:0,18:18:54.18:701,54,0	0/0:24,0:24:72.22:0,72,1039	0/0:29,0:28:78.26:0,78,1165	0/0:50,0:50:99:0,147,2164	0/0:29,0:29:84.28:0,84,1240	0/0:23,0:23:66.22:0,66,989	0/0:38,0:38:99:0,108,1615	0/0:20,0:20:60.20:0,60,899	0/0:32,0:32:96.33:0,96,1437	0/0:39,0:38:99:0,117,1732	0/0:7,0:7:21.07:0,21,315
chr10	53650224	.	A	AAAG	4535.11	PASS	AB=0.784;AC=28;AF=0.500;AN=56;BaseQRankSum=-1.689;DP=549;FS=0.433;HRun=0;HaplotypeScore=86.2628;InbreedingCoeff=0.5537;MQ=70.50;MQ0=1;MQRankSum=1.734;QD=12.49;ReadPosRankSum=-1.267;VQSLOD=4.3258;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:41.45:0,41,475	0/0:7,0:7:17.92:0,18,205	0/0:22,0:13:25.92:0,26,276	0/1:15,0:14:6.33:6,0,101	0/1:4,0:12:10:185,0,10	1/1:9,0:22:5.13:72,5,0	1/1:8,0:29:17.51:116,18,0	0/1:42,0:42:99:130,0,235	0/1:5,0:25:7.13:70,0,7	1/1:2,21:24:66.08:865,66,0	1/1:0,12:14:38.91:497,39,0	0/0:17,0:17:35.91:0,36,305	0/0:17,0:16:31.99:0,32,274	1/1:2,0:15:2.60:10,3,0	0/0:18,0:18:33.33:0,33,311	0/0:19,0:19:31.24:0,31,304	0/1:29,0:29:99:188,0,117	0/0:15,0:14:8.27:0,8,85	1/1:14,1:16:37.74:407,38,0	1/1:1,14:16:31.87:449,32,0	1/1:8,0:9:24.49:247,24,0	0/0:19,0:19:47.04:0,47,436	0/0:15,0:15:27.63:0,28,238	0/0:17,0:17:47.86:0,48,451	0/1:4,0:19:3.69:114,0,4	1/1:2,19:24:62.69:864,63,0	1/1:0,32:38:6.44:77,6,0	1/1:0,8:10:12.04:238,12,0
chr10	53654052	.	CG	C	920.90	PASS	AB=0.958;AC=28;AF=0.560;AN=50;BaseQRankSum=0.871;DP=144;FS=0.971;HRun=10;HaplotypeScore=30.6604;InbreedingCoeff=0.5513;MQ=95.95;MQ0=5;MQRankSum=-0.957;QD=9.69;ReadPosRankSum=2.190;VQSLOD=1.0104;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:3,0:3:3.89:0,4,35	0/0:2,0:2:5.74:0,6,37	0/1:21,0:14:4.27:4,0,92	0/0:12,0:5:0:0,0,0	1/1:0,3:3:6:52,6,0	1/1:1,3:4:9:78,9,0	1/1:3,3:6:5.99:52,6,0	0/0:5,0:5:8.58:0,9,56	1/1:0,6:6:15:130,15,0	./.	1/1:1,1:2:3:26,3,0	0/0:4,0:4:9.02:0,9,97	./.	1/1:1,1:3:5.03:32,5,0	0/0:2,0:2:6.01:0,6,62	0/0:7,0:7:9.02:0,9,100	0/1:10,1:11:8.01:8,0,142	0/0:2,0:2:0:0,0,0	1/1:0,3:3:8.60:63,9,0	1/1:3,1:4:11.93:92,12,0	1/1:4,6:10:14.99:130,15,0	0/0:5,0:5:9.02:0,9,96	0/0:3,0:3:3.01:0,3,33	./.	1/1:1,4:5:9:78,9,0	1/1:4,2:6:5.99:52,6,0	1/1:0,5:5:15:130,15,0	1/1:0,6:6:18:156,18,0
chr10	53655359	.	AAG	A	1194.46	PASS	AB=0.883;AC=15;AF=0.288;AN=52;BaseQRankSum=1.888;DP=683;FS=3.416;HRun=0;HaplotypeScore=128.1724;InbreedingCoeff=0.0787;MQ=67.77;MQ0=8;MQRankSum=3.006;QD=4.04;ReadPosRankSum=0.847;VQSLOD=2.4392;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:37:45.77:0,46,729	0/0:8,0:12:12:0,12,138	./.	./.	0/0:13,0:25:11.62:0,12,65	0/0:12,0:26:9.03:0,9,68	0/0:15,0:25:2.51:0,3,25	0/0:56,0:51:33.71:0,34,260	0/0:14,0:20:3:0,3,27	0/1:31,1:31:17.69:18,0,406	0/0:23,4:27:2.68:0,3,417	0/1:33,0:33:25.32:25,0,662	0/0:18,0:18:27.09:0,27,394	0/0:13,0:17:6.01:0,6,68	0/1:9,0:17:1.17:1,0,246	0/0:6,0:15:12.01:0,12,124	0/0:17,0:19:6.11:0,6,62	0/0:16,0:17:23.38:0,23,243	0/1:13,6:20:21.58:188,0,22	1/1:12,15:28:38.72:368,39,0	0/1:12,5:18:8.14:8,0,39	0/1:25,0:24:19.64:20,0,288	0/1:27,2:29:48.39:48,0,423	0/1:25,3:28:83.81:84,0,424	0/0:22,0:24:11.47:0,11,95	1/1:11,12:23:32.42:311,32,0	1/1:15,2:17:12.03:133,12,0	0/1:11,9:22:49.09:148,0,49
chr10	53656056	.	A	AT	12813.02	PASS	AB=0.964;AC=35;AF=0.625;AN=56;BaseQRankSum=-16.124;DP=745;FS=7.835;HRun=9;HaplotypeScore=69.8745;InbreedingCoeff=0.9439;MQ=79.57;MQ0=0;MQRankSum=-3.474;QD=25.83;ReadPosRankSum=-0.253;VQSLOD=5.1498;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:31:88.99:0,89,755	0/0:10,0:10:29.99:0,30,260	0/1:26,1:27:4.01:4,0,326	0/0:13,0:13:20.98:0,21,181	1/1:4,21:25:60.12:650,60,0	1/1:2,23:25:63.17:697,63,0	1/1:4,20:24:57.15:631,57,0	1/1:8,33:41:99:1095,99,0	1/1:6,31:38:90.08:976,90,0	1/1:4,32:36:96.20:1039,96,0	1/1:1,26:27:72.11:768,72,0	0/0:34,0:34:89.96:0,90,781	0/0:27,0:27:74.96:0,75,651	1/1:3,17:20:51.14:564,51,0	0/0:36,0:36:98.93:0,99,855	0/0:27,1:28:44.80:0,45,618	1/1:1,25:26:72.19:796,72,0	1/1:2,25:27:66.18:730,66,0	1/1:7,14:21:44.95:479,45,0	1/1:6,33:40:75.94:1011,76,0	1/1:2,16:18:48.13:531,48,0	0/0:19,0:19:47.98:0,48,417	0/0:19,0:19:50.97:0,51,443	0/0:32,0:32:92.92:0,93,792	1/1:2,28:29:75.20:828,75,0	1/1:4,25:29:75.18:819,75,0	1/1:3,32:35:90.24:996,90,0	1/1:0,7:7:18.05:199,18,0
chr10	53657681	.	T	TCA	181.49	PASS	AB=1.000;AC=15;AF=0.341;AN=44;BaseQRankSum=1.033;DP=564;FS=0.000;HRun=0;HaplotypeScore=83.1607;InbreedingCoeff=0.5777;MQ=71.31;MQ0=13;MQRankSum=-1.289;QD=1.21;ReadPosRankSum=-0.280;VQSLOD=1.1951;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	0/0:12,0:12:2.90:0,3,16	0/0:15,0:15:5.33:0,5,24	0/0:26,0:26:10.27:0,10,54	./.	0/0:15,0:14:4.95:0,5,21	1/1:24,0:24:2.51:7,3,0	1/1:7,0:7:2.99:24,3,0	0/1:14,0:14:0:0,0,0	./.	0/0:20,0:19:5.57:0,6,28	1/1:11,2:17:3.01:44,3,0	0/0:20,0:21:11.75:0,12,108	1/1:34,0:31:14.61:95,15,0	1/1:21,0:19:2.99:24,3,0	0/0:16,0:15:2.84:0,3,14	0/0:13,0:11:8.52:0,9,42	0/0:26,0:21:5.68:0,6,28	0/0:20,0:19:9.02:0,9,93	0/0:6,0:6:5.91:0,6,48	0/0:42,0:43:13.52:0,14,136	0/0:15,0:15:8.56:0,9,46	1/1:22,0:22:9.33:61,9,0	0/0:21,0:18:14.08:0,14,69	1/1:11,0:11:8.95:67,9,0
chr10	53657726	.	C	CT	7205.59	PASS	AB=0.567;AC=29;AF=0.518;AN=56;BaseQRankSum=-5.138;DP=661;FS=29.149;HRun=0;HaplotypeScore=70.6923;InbreedingCoeff=0.6358;MQ=62.51;MQ0=18;MQRankSum=-0.365;QD=18.29;ReadPosRankSum=2.686;VQSLOD=3.7820;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:42:99:0,99,1230	0/0:8,0:8:21.07:0,21,285	0/0:20,0:13:36.02:0,36,441	0/0:24,0:20:51.13:0,51,683	1/1:0,12:13:18.06:287,18,0	1/1:3,9:12:14.70:332,15,0	1/1:5,25:29:38.68:572,39,0	1/1:3,24:23:66.19:999,66,0	1/1:5,17:20:36.01:542,36,0	1/1:8,12:20:10.95:608,11,0	0/1:5,0:17:52.83:95,0,53	0/0:20,0:20:54.05:0,54,729	0/0:14,0:14:33.11:0,33,453	1/1:4,20:23:23.86:327,24,0	0/0:23,0:23:42.12:0,42,547	0/0:30,1:31:42.25:0,42,1109	0/1:10,1:49:64.13:66,0,64	0/1:5,0:27:12.18:12,0,78	1/1:6,9:14:42.01:621,42,0	1/1:8,8:14:22.25:280,22,0	1/1:21,23:38:30.83:991,31,0	0/0:18,0:18:45.14:0,45,623	0/0:8,0:8:24.08:0,24,322	0/0:58,0:58:99:0,162,2191	1/1:3,10:13:21.07:319,21,0	0/1:8,1:23:99:488,0,118	1/1:14,13:23:49.77:537,50,0	0/1:2,11:13:26.42:130,0,26
chr10	53659063	.	A	AT	1927.76	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=1.250;DP=761;FS=5.408;HRun=1;HaplotypeScore=119.6803;InbreedingCoeff=0.9898;MQ=92.79;MQ0=0;MQRankSum=-1.699;QD=41.02;ReadPosRankSum=2.668;VQSLOD=3.1023;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,123,1636	0/0:7,0:7:21.03:0,21,244	0/0:31,0:31:84.24:0,84,1095	0/0:35,0:34:80.85:0,81,1043	0/0:32,0:32:93.29:0,93,1256	0/0:24,0:23:69.18:0,69,908	0/0:34,0:34:96.29:0,96,1305	0/0:33,0:33:89.07:0,89,1142	0/0:15,0:15:45.12:0,45,592	0/0:28,0:28:80.91:0,81,1056	0/0:17,0:17:45.13:0,45,595	0/0:24,0:24:69.23:0,69,963	0/0:27,0:27:78.24:0,78,1067	0/0:24,0:24:72.21:0,72,972	0/0:38,0:38:99:0,114,1514	0/0:27,0:27:81.24:0,81,1078	1/1:3,25:28:81.22:1239,81,0	1/1:3,16:19:51.17:811,51,0	0/0:27,0:27:72.22:0,72,962	0/0:23,0:23:66.18:0,66,871	0/0:37,0:37:99:0,105,1431	0/0:28,0:28:81.26:0,81,1116	0/0:28,0:28:81.25:0,81,1096	0/0:32,0:32:90.20:0,90,1165	0/0:26,0:26:72.19:0,72,979	0/0:31,0:31:93.27:0,93,1229	0/0:37,0:36:99:0,111,1459	0/0:5,0:5:15.05:0,15,209
chr10	53659143	.	C	CA	18644.31	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-9.904;DP=725;FS=3.227;HRun=1;HaplotypeScore=69.9231;InbreedingCoeff=0.9999;MQ=80.05;MQ0=0;MQRankSum=-1.764;QD=41.16;ReadPosRankSum=1.658;VQSLOD=5.5110;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,129,1658	0/0:11,0:11:30.07:0,30,372	0/0:19,0:19:54.16:0,54,678	0/0:17,0:17:45.15:0,45,582	1/1:0,36:36:99:1528,102,0	1/1:3,29:32:78.26:1169,78,0	1/1:0,30:30:81.27:1214,81,0	1/1:0,22:22:66.20:947,66,0	1/1:0,14:14:39.13:584,39,0	1/1:1,33:34:99:1497,102,0	1/1:1,16:17:42.10:604,42,0	0/0:20,0:20:57.17:0,57,715	0/0:28,0:28:75.22:0,75,957	1/1:0,30:30:90.30:1349,90,0	0/0:28,0:28:84.27:0,84,1090	0/0:29,0:29:87.26:0,87,1102	1/1:2,32:34:87.29:1304,87,0	1/1:0,17:17:42.14:629,42,0	1/1:2,16:18:48.16:720,48,0	1/1:0,30:30:87.22:1255,87,0	1/1:2,32:34:90.30:1348,90,0	0/0:24,0:24:72.22:0,72,920	0/0:20,0:20:57.17:0,57,726	0/0:30,0:30:62.32:0,62,1063	1/1:0,24:24:66.22:989,66,0	1/1:1,30:31:90.30:1349,90,0	1/1:0,30:29:87.29:1303,87,0	1/1:1,19:20:57.19:854,57,0
chr10	53659763	.	G	GCA	19812.92	PASS	AB=1.000;AC=35;AF=0.625;AN=56;BaseQRankSum=-8.612;DP=892;FS=2.339;HRun=0;HaplotypeScore=123.3770;InbreedingCoeff=0.9246;MQ=67.50;MQ0=5;MQRankSum=-1.965;QD=37.03;ReadPosRankSum=-0.990;VQSLOD=6.2445;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,102,1296	0/0:20,0:20:57.19:0,57,734	0/1:31,0:19:6.32:6,0,109	0/0:36,0:21:6.84:0,7,146	1/1:5,29:34:66.22:1109,66,0	1/1:6,15:21:45.15:752,45,0	1/1:4,24:29:60.21:1013,60,0	1/1:9,18:27:51.17:835,51,0	1/1:8,27:35:78.27:1316,78,0	1/1:8,25:33:90.24:1415,90,0	1/1:5,25:30:78.27:1307,78,0	0/0:38,0:38:99:0,105,1336	0/0:46,0:46:99:0,129,1645	1/1:2,24:26:69.24:1164,69,0	0/0:54,0:54:99:0,138,1775	0/0:32,0:32:84.27:0,84,1080	1/1:2,22:24:66.23:1113,66,0	1/1:4,19:22:60.21:1003,60,0	1/1:7,12:19:48.16:803,48,0	1/1:8,24:32:63.22:1063,63,0	1/1:12,50:61:99:2146,129,0	0/0:22,0:22:54.17:0,54,695	0/0:32,0:32:78.08:0,78,1002	0/0:35,0:35:90.27:0,90,1141	1/1:2,26:28:69.24:1164,69,0	1/1:10,28:38:99:1627,99,0	1/1:6,28:35:99:1630,99,0	1/1:1,6:7:21.07:347,21,0
chr10	53659837	.	TA	T	9361.66	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=18.275;DP=657;FS=0.304;HRun=8;HaplotypeScore=147.3422;InbreedingCoeff=0.9986;MQ=64.14;MQ0=0;MQRankSum=-3.624;QD=24.00;ReadPosRankSum=0.554;VQSLOD=3.0135;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,99,1196	0/0:15,0:15:42.12:0,42,495	0/0:9,0:8:19.30:0,19,165	0/0:9,0:8:23.99:0,24,267	1/1:9,20:29:56.59:517,57,0	1/1:1,19:20:51.08:492,51,0	1/1:1,22:23:66.11:637,66,0	1/1:2,32:34:96.15:927,96,0	1/1:3,27:30:78.12:753,78,0	1/1:7,14:21:47.66:444,48,0	1/1:2,19:21:48.07:463,48,0	0/0:25,0:25:69.20:0,69,821	0/0:30,0:30:84.26:0,84,1015	1/1:1,9:10:27.04:261,27,0	0/0:31,0:31:90.18:0,90,1044	0/0:29,0:29:52.58:0,53,870	1/1:7,11:18:42:385,42,0	1/1:1,17:18:43.41:457,43,0	1/1:6,18:25:56.95:536,57,0	1/1:3,21:24:63.10:608,63,0	1/1:3,13:16:32.97:319,33,0	0/0:25,0:25:75.22:0,75,898	0/0:32,0:32:78.24:0,78,942	0/0:27,0:27:74.26:0,74,876	1/1:6,19:25:63.08:599,63,0	1/1:1,30:31:90.13:863,90,0	1/1:3,21:24:51.08:493,51,0	1/1:0,21:21:63.10:608,63,0
chr10	53660172	.	CG	C	13763.87	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=21.364;DP=786;FS=0.000;HRun=2;HaplotypeScore=117.5255;InbreedingCoeff=1.0000;MQ=85.79;MQ0=0;MQRankSum=-3.520;QD=36.51;ReadPosRankSum=1.423;VQSLOD=4.4077;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,108,1618	0/0:16,0:16:48.16:0,48,717	0/0:28,0:28:78.25:0,78,1146	0/0:26,0:27:71:0,71,965	1/1:1,28:29:78.21:992,78,0	1/1:0,20:20:57.19:740,57,0	1/1:1,25:26:69.22:894,69,0	0/0:33,0:33:96.27:0,96,1360	1/1:0,29:29:87.28:1130,87,0	1/1:0,28:28:84.24:1073,84,0	1/1:0,24:24:66.17:837,66,0	0/0:28,0:28:81.26:0,81,1189	0/0:29,0:29:87.27:0,87,1281	1/1:0,29:30:87.28:1128,87,0	0/0:32,0:32:90.29:0,90,1327	0/0:32,0:32:93.32:0,93,1393	0/0:26,0:26:78.26:0,78,1168	0/0:21,0:21:63.20:0,63,924	1/1:0,25:25:75.24:969,75,0	1/1:0,19:19:51.12:643,51,0	1/1:1,39:40:99:1441,111,0	0/0:32,0:32:93.31:0,93,1383	0/0:27,0:27:78.23:0,78,1125	0/0:41,0:41:99:0,120,1776	1/1:1,20:21:60.20:779,60,0	1/1:1,41:42:81.46:1502,81,0	1/1:0,31:31:87.28:1129,87,0	1/1:0,13:13:39.13:506,39,0
chr10	53661543	.	ACTCTCTCTCTCT	A	1210.90	PASS	AB=0.666;AC=23;AF=0.426;AN=54;BaseQRankSum=4.662;DP=496;FS=2.965;HRun=0;HaplotypeScore=169.7078;InbreedingCoeff=0.3916;MQ=67.79;MQ0=8;MQRankSum=-5.088;QD=5.02;ReadPosRankSum=0.814;VQSLOD=2.5180;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:28:39.04:0,39,1702	0/0:8,0:10:3.01:0,3,117	0/0:18,0:12:3.01:0,3,44	0/0:29,0:19:6.02:0,6,81	0/1:14,0:23:10.61:11,0,37	1/1:17,10:28:8.81:223,9,0	0/1:11,11:22:16.21:62,0,16	0/0:20,0:26:7.83:0,8,36	1/1:9,5:14:3.01:103,3,0	0/0:13,0:13:4.39:0,4,14	1/1:15,0:14:2.49:9,2,0	0/0:14,0:19:9.03:0,9,216	0/0:20,0:25:24.08:0,24,568	1/1:15,0:16:11.05:154,11,0	0/0:18,0:21:33.11:0,33,1076	0/0:8,0:12:6.02:0,6,234	0/1:4,0:11:9.18:85,0,9	1/1:3,0:7:3.01:84,3,0	1/1:23,0:22:4.01:93,4,0	./.	0/0:15,0:15:1.25:0,1,3	0/0:3,0:3:2.99:0,3,24	0/0:5,0:5:6:0,6,70	0/0:15,0:21:18.02:0,18,413	1/1:15,5:20:6.02:207,6,0	1/1:27,0:27:1.14:174,1,0	1/1:24,0:23:3:84,3,0	1/1:10,0:9:3.01:84,3,0
chr10	53661564	.	CTCTCTCTCTCTCTCTCTCTCTCTCTGTT	C	1996.11	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=5.441;DP=451;FS=13.714;HRun=0;HaplotypeScore=254.9864;InbreedingCoeff=0.6363;MQ=55.20;MQ0=16;MQRankSum=2.222;QD=18.66;ReadPosRankSum=1.277;VQSLOD=1.1323;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:65.23:0,65,5554	0/0:11,0:11:17.85:0,18,1642	0/0:12,0:7:3.01:0,3,44	0/0:25,0:11:6.02:0,6,106	0/0:23,0:23:28.61:0,29,1091	0/0:26,0:26:23.51:0,24,1055	0/0:26,0:26:39.39:0,39,1662	0/0:16,0:14:27.07:0,27,877	0/0:9,0:9:7.53:0,8,152	0/1:8,0:8:6.97:41,0,7	1/1:6,10:15:3.48:99,3,0	0/0:15,0:15:24.08:0,24,1877	0/0:20,0:19:38.92:0,39,2448	0/0:17,0:17:32.98:0,33,1495	0/0:19,0:19:39.61:0,40,2862	0/0:15,0:14:24.08:0,24,2379	0/0:12,0:12:19.50:0,19,323	0/0:8,0:7:5.61:0,6,112	1/1:9,1:8:6.61:333,7,0	0/0:3,0:3:0.47:0,0,1	1/1:15,0:14:2.07:48,2,0	0/0:5,0:4:4.56:0,5,47	0/0:8,0:8:19.62:0,20,1589	0/0:24,0:24:45.11:0,45,3227	0/0:16,0:16:28.60:0,29,1194	1/1:12,19:31:49.19:1171,49,0	1/1:16,0:15:6.01:239,6,0	1/1:5,6:9:3.01:219,3,0
chr10	53661588	.	CTGTT	C	1647.69	PASS	AB=1.000;AC=15;AF=0.278;AN=54;BaseQRankSum=3.767;DP=422;FS=0.000;HRun=0;HaplotypeScore=93.5555;InbreedingCoeff=0.7637;MQ=59.45;MQ0=9;MQRankSum=-1.766;QD=15.54;ReadPosRankSum=-1.530;VQSLOD=2.8548;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:34.62:0,35,1300	0/0:6,0:6:17.85:0,18,305	0/0:9,0:7:13.50:0,13,188	0/0:19,1:9:8.63:0,9,340	0/1:20,0:20:8.15:8,0,289	0/0:25,0:25:40.10:0,40,562	0/0:25,0:25:21.47:0,21,591	0/0:32,0:31:69.20:0,69,1074	0/0:12,0:12:21.76:0,22,287	1/1:0,10:10:18.06:259,18,0	0/1:10,0:10:0:0,0,0	0/0:17,0:17:39.13:0,39,674	0/0:16,0:15:37.47:0,37,584	0/0:9,0:9:26.53:0,27,384	0/0:15,0:15:36.12:0,36,676	0/0:21,0:20:51.17:0,51,850	0/0:16,0:16:26.90:0,27,367	0/0:9,0:9:14.54:0,15,197	1/1:12,0:10:30.10:459,30,0	./.	1/1:11,0:10:15.05:247,15,0	0/0:6,0:5:10.59:0,11,159	0/1:9,0:9:1.28:1,0,346	0/0:23,0:23:52.70:0,53,710	0/0:15,0:15:31.10:0,31,442	1/1:20,0:20:42.11:581,42,0	1/1:8,0:8:17.75:236,18,0	1/1:6,0:6:3.01:32,3,0
chr10	53661686	.	TGAC	T	1108.62	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-3.549;DP=555;FS=12.402;HRun=0;HaplotypeScore=161.9393;InbreedingCoeff=0.9655;MQ=77.70;MQ0=0;MQRankSum=-4.435;QD=42.64;ReadPosRankSum=-6.011;VQSLOD=2.3590;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:66.23:0,66,1619	0/0:6,0:6:18.06:0,18,444	0/0:15,0:15:45.15:0,45,1072	0/0:15,0:15:42.14:0,42,927	0/0:19,0:19:56.91:0,57,793	0/0:32,0:32:62.33:0,62,1127	0/0:12,0:12:28.79:0,29,451	1/1:0,26:25:69.18:1203,69,0	0/0:18,0:18:23.19:0,23,600	0/0:31,0:31:93.28:0,93,1220	0/0:23,0:23:44.44:0,44,820	0/0:17,0:17:51.18:0,51,1231	0/0:21,0:21:63.22:0,63,1527	0/0:22,0:22:54.80:0,55,809	0/0:30,0:30:90.31:0,90,2213	0/0:19,0:19:57.20:0,57,1350	0/0:17,0:17:45.14:0,45,1057	0/0:8,0:8:15.05:0,15,370	0/0:27,0:27:46.27:0,46,920	0/0:22,0:22:64.03:0,64,879	0/0:9,0:9:21.01:0,21,264	0/0:10,0:10:30.09:0,30,690	0/0:25,0:25:75.26:0,75,1823	0/0:15,0:15:42.14:0,42,1035	0/0:27,0:27:78.26:0,78,1076	0/0:31,0:31:64.08:0,64,1146	0/0:23,0:23:55.50:0,55,895	0/0:11,0:11:21.07:0,21,306
chr10	53661749	.	CT	C	7118.53	PASS	AB=0.900;AC=29;AF=0.518;AN=56;BaseQRankSum=6.513;DP=499;FS=0.000;HRun=8;HaplotypeScore=100.4079;InbreedingCoeff=0.9148;MQ=67.35;MQ0=0;MQRankSum=-2.502;QD=23.81;ReadPosRankSum=1.921;VQSLOD=4.9099;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:51.16:0,51,616	0/0:7,0:7:21.06:0,21,251	0/0:8,0:8:6.22:0,6,46	0/1:8,1:7:12.43:12,0,86	1/1:2,26:28:66.03:625,66,0	1/1:2,28:30:69.11:666,69,0	1/1:1,9:10:24.03:232,24,0	0/0:35,0:35:87.26:0,87,1042	1/1:0,15:15:39.06:377,39,0	1/1:5,25:30:75.08:711,75,0	1/1:0,20:20:56.96:527,57,0	0/0:8,0:8:21.06:0,21,254	0/0:19,0:19:51.14:0,51,604	1/1:0,15:15:39.06:377,39,0	0/0:19,0:19:51.16:0,51,616	0/0:16,0:16:45.14:0,45,543	0/0:1,0:18:46:0,46,234	0/0:0,0:23:54.63:0,55,278	1/1:2,18:20:54.09:521,54,0	1/1:2,11:13:33.05:319,33,0	1/1:0,11:11:33.05:319,33,0	0/0:5,0:5:15.05:0,15,181	0/0:12,0:12:33.09:0,33,387	0/0:10,0:10:30.08:0,30,350	1/1:3,22:25:57.09:550,57,0	1/1:4,25:29:84.13:811,84,0	1/1:2,24:26:66.10:637,66,0	1/1:2,16:18:45.07:435,45,0
chr10	53661845	.	A	AT	9347.29	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-9.358;DP=393;FS=3.287;HRun=6;HaplotypeScore=34.3999;InbreedingCoeff=0.9524;MQ=66.92;MQ0=0;MQRankSum=-1.695;QD=32.91;ReadPosRankSum=-0.163;VQSLOD=4.5898;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:60.14:0,60,612	0/0:3,0:3:9.02:0,9,92	0/0:6,0:6:12.02:0,12,119	0/0:3,0:3:6.01:0,6,61	1/1:4,10:14:30.10:377,30,0	1/1:3,17:20:51.16:642,51,0	1/1:0,5:5:15.05:189,15,0	1/1:2,30:32:90.26:1105,90,0	1/1:0,7:7:21.07:264,21,0	1/1:8,9:17:36.10:432,36,0	1/1:2,15:17:48.15:603,48,0	0/0:9,0:9:24.05:0,24,240	0/0:14,0:14:42.10:0,42,428	1/1:0,16:16:42.13:528,42,0	0/0:22,0:22:63.08:0,63,630	0/0:16,0:16:45.10:0,45,459	1/1:2,17:19:48.11:586,48,0	1/1:5,17:22:60.14:722,60,0	1/1:2,15:17:45.14:566,45,0	1/1:0,14:14:42.13:528,42,0	1/1:1,5:6:15.05:189,15,0	0/0:3,0:3:9.02:0,9,92	0/0:8,0:8:21.03:0,21,208	0/0:4,0:4:12.03:0,12,122	1/1:3,14:17:42.13:528,42,0	1/1:2,26:28:78.22:955,78,0	1/1:1,23:24:69.22:868,69,0	1/1:2,7:9:21.07:264,21,0
chr10	53661947	.	A	AT	1111.77	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=-2.936;DP=316;FS=0.675;HRun=3;HaplotypeScore=49.4227;InbreedingCoeff=0.4579;MQ=64.77;MQ0=2;MQRankSum=1.066;QD=21.80;ReadPosRankSum=-6.145;VQSLOD=1.5242;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:30.09:0,30,360	0/0:3,0:3:9.03:0,9,108	0/0:4,0:4:6.75:0,7,89	0/0:4,0:4:12.01:0,12,118	0/0:16,0:16:43.30:0,43,237	0/0:15,0:15:35.85:0,36,205	0/0:7,0:7:19.92:0,20,99	1/1:3,32:35:95.88:1201,96,0	0/0:11,0:11:29.33:0,29,157	0/0:15,0:15:10.90:0,11,135	0/0:7,0:7:15.44:0,15,85	0/0:9,0:9:27.08:0,27,324	0/0:14,0:14:42.13:0,42,503	0/0:9,0:9:20.97:0,21,111	0/0:9,0:9:27.08:0,27,324	0/0:12,0:12:33.10:0,33,396	0/0:21,0:20:51.77:0,52,314	0/0:19,0:19:52.10:0,52,288	0/0:17,0:15:11.24:0,11,130	0/0:5,0:5:14.48:0,14,81	0/0:6,0:6:17.25:0,17,90	0/0:1,0:1:3.01:0,3,36	0/0:4,0:4:9.03:0,9,108	0/0:7,0:7:21.06:0,21,252	0/0:12,0:12:28.59:0,29,156	0/1:16,0:16:15.24:15,0,116	0/0:19,0:19:44.92:0,45,242	0/0:8,0:8:23.06:0,23,122
chr10	53662125	.	AAT	A	38.81	PASS	AB=0.905;AC=12;AF=0.750;AN=16;BaseQRankSum=2.141;DP=132;FS=0.000;HRun=0;HaplotypeScore=25.6589;MQ=66.37;MQ0=2;MQRankSum=-1.000;QD=0.75;ReadPosRankSum=1.000;VQSLOD=1.0217;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	0/1:16,0:6:0.17:0,0,0	1/1:4,0:5:2.84:14,3,0	1/1:2,0:3:2.84:14,3,0	./.	./.	1/1:0,0:2:5.68:28,6,0	./.	./.	./.	./.	1/1:2,0:3:2.84:14,3,0	./.	./.	0/1:13,4:17:16.86:17,0,134	0/0:9,0:11:3:0,3,26	./.	./.	./.	./.	./.	./.	./.	./.	./.	1/1:5,1:6:3.01:32,3,0
chr10	53663036	.	ATG	A	292.52	PASS	AB=0.920;AC=24;AF=0.522;AN=46;BaseQRankSum=4.435;DP=550;FS=2.921;HRun=0;HaplotypeScore=91.9630;InbreedingCoeff=0.2873;MQ=66.70;MQ0=11;MQRankSum=-0.216;QD=1.05;ReadPosRankSum=3.469;VQSLOD=1.6569;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:31:9.01:0,9,109	0/0:10,0:10:3.01:0,3,44	./.	./.	0/0:17,0:17:6:0,6,67	0/0:14,0:13:9:0,9,91	0/1:24,0:24:22.71:23,0,77	0/0:29,0:28:2.13:0,2,5	0/1:23,1:24:17.98:18,0,100	1/1:18,0:19:2.84:14,3,0	./.	./.	1/1:16,1:17:3.01:32,3,0	0/0:13,0:13:3:0,3,25	1/1:15,0:16:2.84:14,3,0	0/0:15,0:15:6.02:0,6,83	1/1:20,2:20:12.03:127,12,0	0/1:20,6:25:25.79:26,0,38	0/0:24,0:23:0:0,0,0	./.	1/1:31,0:30:3:26,3,0	1/1:18,3:21:5.68:63,6,0	1/1:9,2:11:3.01:32,3,0	0/1:27,3:30:0.01:0,0,0	0/0:17,0:17:9.03:0,9,131	1/1:17,0:16:2.82:14,3,0	1/1:12,0:13:5.68:28,6,0	1/1:5,0:6:2.84:14,3,0
chr10	53666524	.	AC	A	12527.75	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=14.114;DP=636;FS=2.468;HRun=3;HaplotypeScore=76.3243;InbreedingCoeff=0.9758;MQ=80.64;MQ0=0;MQRankSum=-2.915;QD=34.61;ReadPosRankSum=1.623;VQSLOD=5.5628;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,117,1683	0/0:8,0:8:24.08:0,24,346	0/0:19,0:19:55.06:0,55,756	0/0:18,0:18:45.68:0,46,687	1/1:1,28:29:69.22:854,69,0	1/1:0,32:32:93.29:1152,93,0	1/1:0,16:16:42.13:520,42,0	1/1:0,22:22:63.20:781,63,0	1/1:1,25:26:66.21:818,66,0	1/1:0,34:34:99:1262,102,0	1/1:0,13:13:36.11:446,36,0	0/0:28,0:28:78.26:0,78,1111	0/0:18,0:18:54.17:0,54,760	1/1:1,24:25:72.23:893,72,0	0/0:26,0:26:78.25:0,78,1107	0/0:16,0:16:45.15:0,45,647	0/0:21,0:21:63.21:0,63,905	0/0:23,0:23:69.23:0,69,993	1/1:0,17:17:51.16:632,51,0	1/1:1,43:44:99:1487,120,0	1/1:0,32:33:96.30:1190,96,0	0/0:24,0:24:72.23:0,72,1015	0/0:18,0:18:54.18:0,54,777	0/0:15,0:15:42.14:0,42,605	1/1:0,24:24:72.23:893,72,0	1/1:1,21:22:63.20:780,63,0	1/1:1,22:23:63.20:780,63,0	1/1:0,2:2:3.01:37,3,0
chr10	53666772	.	A	AGATTGACT	37900.58	PASS	AC=28;AF=0.519;AN=54;BaseQRankSum=5.984;DP=753;FS=0.567;HRun=0;HaplotypeScore=221.1784;InbreedingCoeff=0.9955;MQ=79.38;MQ0=0;MQRankSum=-20.935;QD=98.70;ReadPosRankSum=-4.169;VQSLOD=4.2417;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,151,4211	0/0:4,0:4:12.04:0,12,290	0/0:26,0:26:66.21:0,66,1658	0/0:26,0:26:63.19:0,63,1439	1/1:9,19:29:69.11:2461,69,0	1/1:7,13:22:42.10:1740,42,0	1/1:13,13:26:66.15:2323,66,0	1/1:17,13:33:93.31:3446,93,0	1/1:10,20:31:87.21:3337,87,0	1/1:11,24:36:99:4143,102,0	1/1:6,14:23:57.11:1856,57,0	0/0:31,0:31:90.31:0,90,2533	0/0:26,0:26:72.25:0,72,2067	1/1:8,23:33:90.27:3822,90,0	0/0:25,0:25:69.20:0,69,1738	0/0:26,0:26:78.25:0,78,2175	0/0:42,0:42:99:0,117,3239	0/0:27,0:27:81.28:0,81,2191	1/1:9,11:23:63.20:2221,63,0	1/1:7,11:18:39.05:1380,39,0	1/1:8,8:19:30.53:1052,31,0	0/0:30,0:30:87.26:0,87,2271	0/0:12,0:12:36.12:0,36,991	0/0:42,0:42:99:0,123,3379	1/1:2,12:14:36.12:1552,36,0	1/1:11,34:47:99:5682,138,0	1/1:8,17:28:72.16:2886,72,0	./.
chr10	53667129	.	TG	T	5856.96	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=12.641;DP=441;FS=4.001;HRun=7;HaplotypeScore=74.5050;InbreedingCoeff=0.9497;MQ=77.74;MQ0=0;MQRankSum=-3.845;QD=23.81;ReadPosRankSum=2.888;VQSLOD=5.4575;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:63.18:0,63,766	0/0:5,0:5:11.63:0,12,124	0/0:14,0:15:7.85:0,8,208	0/0:14,0:14:2.24:0,2,196	1/1:3,15:18:39.08:394,39,0	1/1:2,11:13:33.07:336,33,0	1/1:3,14:17:48.06:472,48,0	1/1:12,12:24:50.83:518,51,0	1/1:1,14:15:45.10:457,45,0	1/1:5,13:18:51.11:518,51,0	1/1:6,12:18:30.06:303,30,0	0/0:14,0:14:42.12:0,42,513	0/0:28,0:28:78.25:0,78,974	1/1:4,12:16:39.08:395,39,0	0/0:18,0:18:45.14:0,45,566	0/0:13,0:13:33.11:0,33,415	0/0:17,0:17:48.14:0,48,591	0/0:9,0:9:24.08:0,24,302	1/1:3,8:11:24.05:244,24,0	1/1:3,13:15:36.08:366,36,0	1/1:5,14:19:48.55:482,49,0	0/0:20,0:20:57.18:0,57,717	0/0:12,0:12:33.11:0,33,414	0/0:6,0:6:18.06:0,18,226	1/1:4,11:15:36.08:364,36,0	1/1:6,14:20:10.35:414,10,0	1/1:7,11:18:39.08:391,39,0	1/1:2,6:8:21.02:203,21,0
chr10	53667138	.	TG	T	6015.87	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=12.871;DP=432;FS=1.762;HRun=7;HaplotypeScore=74.7415;InbreedingCoeff=0.9893;MQ=74.78;MQ0=0;MQRankSum=-4.896;QD=24.36;ReadPosRankSum=1.646;VQSLOD=5.4127;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:48.14:0,48,588	0/0:6,0:6:18.04:0,18,203	0/0:12,0:12:18.88:0,19,182	0/0:14,0:14:20.33:0,20,204	1/1:2,18:20:42.09:424,42,0	1/1:0,11:11:33.08:336,33,0	1/1:3,15:18:42.09:425,42,0	1/1:6,22:28:53.78:548,54,0	1/1:1,17:18:45.10:457,45,0	1/1:4,17:21:54.09:541,54,0	1/1:1,14:15:27.05:271,27,0	0/0:16,0:16:39.11:0,39,477	0/0:29,0:29:78.25:0,78,975	1/1:1,12:13:39.08:395,39,0	0/0:15,0:15:39.12:0,39,491	0/0:12,0:12:36.10:0,36,440	0/0:16,0:16:45.13:0,45,554	0/0:6,0:6:15.03:0,15,173	1/1:1,8:9:24.05:243,24,0	1/1:1,15:15:39.08:397,39,0	1/1:2,15:17:45.57:459,46,0	0/0:20,0:20:48.15:0,48,603	0/0:13,0:13:33.10:0,33,409	0/0:6,0:6:12.04:0,12,151	1/1:4,11:14:36.08:363,36,0	1/1:4,18:22:22.37:531,22,0	1/1:3,13:16:42.09:423,42,0	1/1:2,6:8:21.02:203,21,0
chr10	53667422	.	TGC	T	13076.93	PASS	AB=0.514;AC=29;AF=0.518;AN=56;BaseQRankSum=18.717;DP=698;FS=3.208;HRun=0;HaplotypeScore=127.5295;InbreedingCoeff=0.9558;MQ=85.61;MQ0=0;MQRankSum=-5.916;QD=38.69;ReadPosRankSum=0.693;VQSLOD=6.4896;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,147,2682	0/0:13,0:13:36.07:0,36,636	0/0:24,0:24:59.77:0,60,1193	0/0:23,0:24:60.21:0,60,1113	1/1:1,22:23:60.20:855,60,0	1/1:1,24:25:69.19:991,69,0	1/1:3,17:20:48.16:706,48,0	1/1:6,18:24:54.16:775,54,0	1/1:1,29:30:84.28:1232,84,0	1/1:0,22:22:66.22:971,66,0	1/1:2,14:16:36.12:521,36,0	0/0:30,1:31:49.13:0,49,1596	0/0:32,0:32:90.26:0,90,1639	1/1:2,27:29:69.23:1013,69,0	0/0:20,0:20:60.21:0,60,1111	0/0:26,0:26:72.25:0,72,1347	0/0:47,0:47:99:0,141,2634	0/0:19,0:19:57.20:0,57,1066	1/1:3,26:29:78.26:1146,78,0	1/1:0,13:13:36.08:506,36,0	1/1:1,35:36:98.54:1412,99,0	0/0:22,0:22:57.20:0,57,1064	0/0:15,0:15:42.14:0,42,785	0/0:35,0:35:99:0,102,1896	1/1:0,21:21:63.21:927,63,0	0/1:1,17:18:1.92:696,0,2	1/1:0,25:25:69.23:1015,69,0	1/1:0,7:7:21.07:309,21,0
chr10	53668656	.	GT	G	1280.32	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.757;DP=705;FS=2.998;HRun=3;HaplotypeScore=68.3682;InbreedingCoeff=0.9959;MQ=91.12;MQ0=0;MQRankSum=-2.432;QD=34.60;ReadPosRankSum=-3.988;VQSLOD=2.4987;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:99:0,99,1382	0/0:8,0:8:21.07:0,21,302	0/0:30,0:30:90.23:0,90,1175	0/0:27,0:27:73.08:0,73,990	0/0:26,0:26:75.24:0,75,1063	0/0:17,0:17:48.16:0,48,691	0/0:33,0:33:96.32:0,96,1383	1/1:0,37:37:99:1375,111,0	0/0:30,0:30:87.28:0,87,1234	0/0:28,0:28:84.28:0,84,1210	0/0:18,0:18:51.17:0,51,733	0/0:20,0:20:60.20:0,60,863	0/0:33,0:33:90.30:0,90,1295	0/0:25,0:25:72.22:0,72,1002	0/0:22,0:22:63.21:0,63,907	0/0:17,0:17:48.16:0,48,691	0/0:30,0:30:90.30:0,90,1296	0/0:15,0:15:42.11:0,42,582	0/0:20,0:20:57.19:0,57,820	0/0:33,0:33:96.32:0,96,1382	0/0:26,0:26:78.26:0,78,1123	0/0:23,0:23:69.21:0,69,973	0/0:16,0:16:39.13:0,39,561	0/0:31,0:31:90.25:0,90,1252	0/0:25,0:25:75.25:0,75,1080	0/0:30,0:30:87.27:0,87,1219	0/0:36,0:35:99:0,108,1555	0/0:16,0:16:45.15:0,45,647
chr10	53669363	.	ACCCCC	A	16108.89	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=8.105;DP=621;FS=6.298;HRun=10;HaplotypeScore=135.6541;InbreedingCoeff=0.9926;MQ=75.29;MQ0=0;MQRankSum=-9.385;QD=42.96;ReadPosRankSum=4.902;VQSLOD=2.5904;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:75.24:0,75,2073	0/0:8,0:8:14.76:0,15,406	0/0:19,0:20:34.04:0,34,1045	0/0:20,0:20:48.16:0,48,1036	1/1:1,25:26:51.16:955,51,0	1/1:1,25:26:69.23:1292,69,0	1/1:3,16:19:42.14:787,42,0	1/1:11,27:38:81.16:1408,81,0	1/1:1,28:29:69.23:1292,69,0	1/1:2,28:30:81.26:1502,81,0	1/1:0,14:14:24.08:449,24,0	0/0:11,0:15:36.12:0,36,935	0/0:20,0:23:66.22:0,66,1716	1/1:2,31:33:84.28:1568,84,0	0/0:18,0:19:51.18:0,51,1472	0/0:27,0:32:84.29:0,84,2299	0/0:7,0:12:27.56:0,28,739	0/0:9,0:15:33.11:0,33,871	1/1:4,9:13:27.07:506,27,0	1/1:2,27:29:69.22:1292,69,0	1/1:4,35:39:80.97:1517,81,0	0/0:13,0:15:26.99:0,27,758	0/0:10,0:12:36.12:0,36,890	0/0:21,0:26:66.21:0,66,1697	1/1:4,12:16:33.10:618,33,0	1/1:5,33:38:99:1854,99,0	1/1:1,20:21:45.15:843,45,0	1/1:0,4:4:12.04:225,12,0
chr10	53670336	.	C	CA	12158.95	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-15.683;DP=755;FS=1.910;HRun=6;HaplotypeScore=70.0488;InbreedingCoeff=0.9854;MQ=75.00;MQ0=0;MQRankSum=-1.023;QD=32.95;ReadPosRankSum=-1.438;VQSLOD=4.5665;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,120,1215	0/0:11,0:11:30.07:0,30,306	0/0:13,0:13:32.40:0,32,300	0/0:13,0:13:26.95:0,27,254	1/1:4,29:34:93.05:1112,93,0	1/1:2,14:16:42.13:523,42,0	1/1:4,30:34:87.26:1076,87,0	1/1:6,19:25:54.15:654,54,0	1/1:1,19:20:60.19:753,60,0	1/1:3,39:42:99:1383,111,0	1/1:1,23:24:69.22:868,69,0	0/0:45,0:45:99:0,120,1218	0/0:43,0:43:99:0,126,1260	1/1:0,14:14:39.12:491,39,0	0/0:27,0:27:66.14:0,66,673	0/0:20,0:20:57.13:0,57,581	0/0:42,0:42:99:0,120,1217	0/0:28,0:28:72.13:0,72,725	1/1:4,27:31:84.26:1044,84,0	1/1:4,14:18:45.14:561,45,0	1/1:2,39:41:99:1396,111,0	0/0:32,0:32:87.17:0,87,879	0/0:21,0:21:60.11:0,60,599	0/0:41,0:41:99:0,123,1236	1/1:3,17:20:51.16:642,51,0	1/1:3,21:24:66.21:825,66,0	1/1:1,23:24:60.19:755,60,0	1/1:0,2:2:6.02:75,6,0
chr10	53674102	.	GA	G	689.42	PASS	AB=0.818;AC=5;AF=0.089;AN=56;BaseQRankSum=2.838;DP=553;FS=7.387;HRun=10;HaplotypeScore=106.3612;InbreedingCoeff=0.4036;MQ=63.90;MQ0=10;MQRankSum=-0.180;QD=7.41;ReadPosRankSum=2.215;VQSLOD=1.7841;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:37:91.26:0,91,918	0/1:8,1:9:7.99:8,0,147	0/1:34,2:13:1.71:2,0,146	0/0:30,1:14:26.89:0,27,243	0/0:23,0:23:54.13:0,54,586	0/0:16,0:16:33.05:0,33,350	0/0:24,1:26:30.93:0,31,552	0/0:34,0:33:84.19:0,84,916	0/0:11,0:12:29.91:0,30,313	0/0:23,0:23:66.17:0,66,720	0/0:13,0:13:27.07:0,27,293	0/0:16,0:15:38.32:0,38,404	0/0:11,0:11:26.93:0,27,259	0/0:20,0:20:40.63:0,41,419	0/0:14,1:15:9.93:0,10,397	0/0:17,0:17:48.10:0,48,520	0/1:8,14:23:10.73:351,0,11	1/1:8,17:25:50.97:441,51,0	0/0:15,0:15:42.09:0,42,454	0/0:15,0:14:33:0,33,345	0/0:11,0:11:17.97:0,18,183	0/0:16,1:18:24.89:0,25,474	0/0:17,0:17:46.26:0,46,484	0/0:29,0:29:83.87:0,84,866	0/0:14,0:14:27.07:0,27,298	0/0:16,0:16:36.06:0,36,385	0/0:21,0:21:45.10:0,45,486	0/0:9,0:9:10.27:0,10,103
chr10	53674126	.	AACACACACACAC	A	9702.62	PASS	AB=0.601;AC=24;AF=0.444;AN=54;BaseQRankSum=8.485;DP=557;FS=2.726;HRun=0;HaplotypeScore=195.0783;InbreedingCoeff=0.6628;MQ=58.30;MQ0=10;MQRankSum=-10.087;QD=39.76;ReadPosRankSum=1.045;VQSLOD=4.7263;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:34:68.75:0,69,2506	0/0:5,0:5:12.04:0,12,703	0/0:24,0:9:6.01:0,6,84	0/0:28,0:13:9.03:0,9,205	1/1:11,14:25:2.49:508,2,0	0/1:3,14:18:1.35:992,0,1	0/1:7,9:17:5.95:303,0,6	0/0:33,0:31:33.04:0,33,383	1/1:4,11:14:27.09:944,27,0	1/1:7,14:21:33.73:1029,34,0	1/1:7,6:13:12.04:420,12,0	0/0:15,0:20:48.12:0,48,2319	0/0:9,0:9:21.07:0,21,1114	1/1:4,16:20:35.71:1164,36,0	0/0:24,0:24:63.14:0,63,2884	0/0:18,0:18:36.12:0,36,1864	0/0:16,0:24:16.12:0,16,966	0/1:9,0:22:35.81:36,0,1237	1/1:10,4:13:9.24:247,9,0	1/1:2,15:17:33.07:1057,33,0	./.	0/0:25,0:27:51.13:0,51,2412	0/0:19,0:20:42.10:0,42,1907	0/0:27,0:27:57.17:0,57,2758	1/1:3,17:20:38.76:1277,39,0	0/1:6,11:17:53.71:468,0,54	1/1:4,15:19:29.34:1047,29,0	1/1:3,2:5:6.02:210,6,0
chr10	53674156	.	CACACAT	C	2056.24	PASS	AB=1.000;AC=16;AF=0.286;AN=56;BaseQRankSum=14.764;DP=618;FS=4.824;HRun=0;HaplotypeScore=177.5932;InbreedingCoeff=-0.2204;MQ=54.95;MQ0=12;MQRankSum=-9.562;QD=6.68;ReadPosRankSum=7.620;VQSLOD=1.8379;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:54.22:0,54,1267	0/0:8,0:8:24.02:0,24,542	0/0:26,0:15:9.69:0,10,257	0/0:26,0:13:10.62:0,11,265	0/1:25,0:25:93.49:93,0,122	0/1:21,0:21:68.98:208,0,69	0/1:22,0:21:38.66:39,0,180	1/1:9,21:26:50.53:364,51,0	0/1:20,0:19:98.92:195,0,99	0/1:22,0:22:99:171,0,110	0/1:12,0:12:73.11:80,0,73	0/0:26,0:27:63.15:0,63,1620	0/0:13,0:13:36.02:0,36,843	0/1:21,0:21:22.95:258,0,23	0/0:29,0:29:64.76:0,65,1826	0/0:17,0:17:37.19:0,37,1070	0/1:21,0:21:2.25:2,0,603	0/0:31,0:30:70.26:0,70,1061	0/1:15,0:14:17.20:17,0,146	0/1:28,0:28:99:201,0,212	0/0:20,0:19:6.17:0,6,48	0/0:25,0:25:66.01:0,66,1541	0/0:18,0:18:45.08:0,45,1162	0/0:35,0:35:66.91:0,67,1811	0/1:27,0:27:99:247,0,126	0/1:17,0:17:72.23:72,0,98	0/1:23,0:23:93.21:224,0,93	0/1:4,0:4:15.99:47,0,16
chr10	53675393	.	CGTGTGTGTGTGTGTGTGTGTGTGTGT	C	3209.28	PASS	AB=0.711;AC=10;AF=0.192;AN=52;BaseQRankSum=7.435;DP=669;FS=0.890;HRun=0;HaplotypeScore=355.0740;InbreedingCoeff=0.4189;MQ=55.75;MQ0=25;MQRankSum=-6.337;QD=18.66;ReadPosRankSum=3.247;VQSLOD=1.4282;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:53.20:0,53,4244	0/0:12,0:12:25.64:0,26,2110	./.	0/0:22,0:13:0:0,0,0	1/1:11,8:19:6.02:157,6,0	1/1:11,13:26:17.65:1087,18,0	./.	0/0:27,0:25:18.53:0,19,629	0/1:11,13:24:87.93:989,0,88	0/0:21,0:20:39.13:0,39,3137	0/0:5,0:7:12.04:0,12,988	0/0:29,0:29:36.59:0,37,3122	0/0:22,0:22:42.14:0,42,3027	0/1:16,11:25:99:395,0,150	0/0:16,0:16:30.10:0,30,2396	0/0:22,0:25:60.21:0,60,5141	0/1:26,0:38:99:122,0,121	0/1:14,0:20:99:264,0,136	0/0:25,0:25:38.99:0,39,1828	0/0:12,0:19:27.09:0,27,2405	0/0:63,0:63:99:0,110,9443	0/0:19,0:19:25.64:0,26,2174	0/0:11,0:12:17.35:0,17,1463	0/0:34,0:36:69.15:0,69,6138	1/1:8,6:13:6.02:340,6,0	0/0:28,0:28:48.62:0,49,3868	0/0:12,0:12:24.55:0,25,2265	0/0:3,0:5:9.03:0,9,538
chr10	53676654	.	AACACACACACACACAC	A	4398.29	PASS	AB=0.786;AC=19;AF=0.352;AN=54;BaseQRankSum=9.116;DP=511;FS=11.718;HRun=0;HaplotypeScore=229.6020;InbreedingCoeff=0.4846;MQ=64.83;MQ0=21;MQRankSum=-5.893;QD=23.27;ReadPosRankSum=3.158;VQSLOD=2.2849;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:43:42.14:0,42,2406	0/0:11,0:11:12.04:0,12,825	0/0:30,0:17:9.03:0,9,255	0/0:26,0:19:12.04:0,12,379	0/0:9,0:16:2.89:0,3,17	1/1:13,2:22:6.16:160,6,0	0/0:13,0:18:1.27:0,1,4	0/0:21,0:18:20.94:0,21,713	0/1:13,1:19:2.90:540,0,3	0/1:5,8:12:83.34:492,0,83	./.	0/0:26,0:26:36.12:0,36,1980	0/0:10,0:10:15.05:0,15,967	0/1:9,2:15:99:228,0,181	0/0:18,0:17:27.09:0,27,1466	0/0:17,0:17:39.13:0,39,2351	0/1:18,0:17:6.88:7,0,86	0/0:10,0:9:11.36:0,11,109	1/1:5,7:12:21.07:834,21,0	1/1:4,9:15:6.02:259,6,0	1/1:15,0:17:2.87:24,3,0	0/0:15,0:15:17.71:0,18,746	0/0:17,0:17:24.08:0,24,1320	0/0:32,0:31:33.10:0,33,2054	0/1:14,0:16:18.95:71,0,19	1/1:8,2:13:27.97:956,28,0	1/1:10,5:17:11.33:449,11,0	1/1:0,3:3:9.03:379,9,0
chr10	53676709	.	AGAGAGAGAGAGAGG	A	526.41	PASS	AB=0.944;AC=6;AF=0.120;AN=50;BaseQRankSum=4.908;DP=560;FS=35.236;HRun=0;HaplotypeScore=227.9757;InbreedingCoeff=0.4171;MQ=40.61;MQ0=19;MQRankSum=-5.044;QD=5.06;ReadPosRankSum=-0.656;VQSLOD=1.1627;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:34:30.37:0,30,1868	0/0:8,0:8:2.82:0,3,599	0/0:5,0:2:6.02:0,6,364	0/0:15,0:4:12.02:0,12,350	0/1:22,2:23:0.36:1,0,0	1/1:32,3:33:2.22:7,2,0	./.	0/0:30,0:30:51.93:0,52,1663	1/1:14,3:16:23:545,23,0	0/0:19,0:16:21.58:0,22,884	./.	0/0:27,0:26:41.89:0,42,1645	0/0:21,0:21:38.16:0,38,1924	0/1:27,1:27:33.16:82,0,33	0/0:18,0:17:30.10:0,30,1812	0/0:23,0:23:47.32:0,47,2242	0/0:21,0:19:23.44:0,23,1150	0/0:11,0:9:27.04:0,27,1028	0/0:15,0:15:3.15:0,3,336	0/0:17,0:17:2.79:0,3,26	0/0:11,0:11:6.01:0,6,102	0/0:14,0:14:22.01:0,22,1186	0/0:20,0:20:27.56:0,28,1716	0/0:41,0:41:54.12:0,54,2781	./.	0/0:32,0:29:37.38:0,37,1383	0/0:20,0:19:8.33:0,8,549	0/0:8,0:6:2.03:0,2,246
chr10	53676711	.	AGAGAGAGAGAGG	A	704.96	PASS	AB=0.920;AC=12;AF=0.240;AN=50;BaseQRankSum=4.687;DP=574;FS=38.535;HRun=0;HaplotypeScore=219.3518;InbreedingCoeff=0.0737;MQ=41.92;MQ0=21;MQRankSum=-4.704;QD=2.96;ReadPosRankSum=-3.047;VQSLOD=0.9960;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:33:30.01:0,30,1599	0/0:8,0:8:2.82:0,3,496	0/0:7,0:3:2.19:0,2,308	0/0:19,0:6:10.85:0,11,273	0/1:15,9:23:0.23:1,0,0	1/1:19,16:33:2.69:8,3,0	./.	0/1:33,0:33:13.52:14,0,1225	1/1:18,2:19:28.61:561,29,0	0/1:21,0:18:41.47:41,0,619	./.	0/0:28,0:27:21.49:0,21,1314	0/0:21,0:21:38.16:0,38,1652	0/1:12,16:27:14:99,0,14	0/0:18,0:17:29.84:0,30,1565	0/0:22,0:22:47.37:0,47,1887	0/0:21,0:19:15.36:0,15,983	0/0:11,0:9:27.04:0,27,862	0/1:16,0:16:69.18:69,0,229	0/0:17,0:17:2.25:0,2,9	0/0:11,0:11:3.90:0,4,52	0/0:14,0:14:21.54:0,22,1015	0/0:19,0:19:27.56:0,28,1498	0/0:39,0:39:60.03:0,60,2423	./.	0/1:33,0:30:21.55:22,0,1003	0/1:20,0:19:21.28:21,0,374	0/1:8,0:6:7.46:7,0,176
chr10	53676868	.	A	AG	1695.06	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-4.537;DP=623;FS=9.547;HRun=1;HaplotypeScore=84.0610;InbreedingCoeff=0.9979;MQ=83.60;MQ0=0;MQRankSum=0.032;QD=36.85;ReadPosRankSum=-3.758;VQSLOD=1.7852;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:60.19:0,60,764	0/0:10,0:10:30.10:0,30,389	0/0:25,0:25:72.15:0,72,862	0/0:15,0:15:42.11:0,42,524	0/0:37,0:37:99:0,108,1373	0/0:31,0:31:93.25:0,93,1159	0/0:12,0:12:33.11:0,33,424	1/1:4,42:45:99:1790,126,0	0/0:25,0:25:66.21:0,66,856	0/0:26,0:26:75.19:0,75,933	0/0:22,0:22:66.19:0,66,829	0/0:12,0:12:36.10:0,36,449	0/0:14,0:14:42.14:0,42,544	0/0:26,0:26:72.20:0,72,902	0/0:16,0:16:48.16:0,48,623	0/0:27,0:27:81.24:0,81,1025	0/0:20,0:20:54.17:0,54,700	0/0:23,0:23:63.20:0,63,817	0/0:17,0:17:48.15:0,48,608	0/0:19,0:19:57.19:0,57,740	0/0:34,0:34:99:0,99,1285	0/0:12,0:12:36.10:0,36,453	0/0:25,0:25:75.14:0,75,922	0/0:21,0:21:63.20:0,63,816	0/0:24,0:24:69.19:0,69,855	0/0:25,0:25:75.24:0,75,971	0/0:30,0:30:84.23:0,84,1066	0/0:9,0:9:26.99:0,27,311
chr10	53677016	.	TA	T	9607.54	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=9.932;DP=505;FS=3.588;HRun=5;HaplotypeScore=52.8121;InbreedingCoeff=0.9960;MQ=84.64;MQ0=0;MQRankSum=-1.445;QD=29.74;ReadPosRankSum=0.641;VQSLOD=5.3154;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:93.31:0,93,1271	0/0:6,0:6:15.05:0,15,201	0/0:20,0:20:48.16:0,48,650	0/0:15,0:15:22.83:0,23,434	1/1:1,17:18:42.12:476,42,0	1/1:2,22:24:57.16:647,57,0	1/1:1,19:20:51.14:579,51,0	1/1:3,20:23:60.17:681,60,0	1/1:1,16:17:42.12:476,42,0	1/1:1,27:28:78.21:873,78,0	1/1:1,7:8:18.05:204,18,0	0/0:13,0:13:36.11:0,36,475	0/0:18,0:18:51.17:0,51,696	1/1:0,15:15:45.13:510,45,0	0/0:15,0:15:45.15:0,45,616	0/0:16,0:16:48.16:0,48,656	1/1:2,32:34:96.27:1089,96,0	1/1:1,16:17:48.14:544,48,0	1/1:1,14:15:42.10:466,42,0	1/1:3,17:20:45.13:510,45,0	1/1:1,15:16:42.12:477,42,0	0/0:15,0:15:42.14:0,42,574	0/0:14,0:14:39.13:0,39,533	0/0:19,0:19:57.19:0,57,777	1/1:1,13:14:33.09:374,33,0	1/1:2,18:20:54.15:613,54,0	1/1:1,23:24:66.19:749,66,0	1/1:0,10:10:30.09:340,30,0
chr10	53677897	.	TGGGAAGATGTA	T	1458.01	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.527;DP=662;FS=0.000;HRun=0;HaplotypeScore=204.9386;InbreedingCoeff=0.9696;MQ=84.80;MQ0=0;MQRankSum=-4.324;QD=85.77;ReadPosRankSum=-2.941;VQSLOD=2.8981;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,105,5761	0/0:11,0:11:33.11:0,33,1826	0/0:24,0:24:72.18:0,72,3486	0/0:20,0:20:51.54:0,52,2227	0/0:27,0:27:81.28:0,81,4759	0/0:22,0:21:66.23:0,66,3804	0/0:29,0:29:87.30:0,87,4764	1/1:0,17:16:48.14:1553,48,0	0/0:22,0:22:63.22:0,63,3670	0/0:38,0:38:99:0,114,6375	0/0:24,0:24:72.25:0,72,4138	0/0:28,0:28:84.29:0,84,4632	0/0:21,0:21:63.22:0,63,3589	0/0:22,0:22:66.23:0,66,3732	0/0:28,0:28:84.29:0,84,4809	0/0:27,0:27:81.28:0,81,4541	0/0:27,0:27:81.28:0,81,4406	0/0:20,0:20:60.21:0,60,3507	0/0:10,0:10:30.09:0,30,1338	0/0:39,0:39:99:0,117,6363	0/0:21,0:21:63.22:0,63,3286	0/0:18,0:18:54.19:0,54,2909	0/0:17,0:17:48.16:0,48,2717	0/0:27,0:27:81.28:0,81,4699	0/0:21,0:21:63.22:0,63,3574	0/0:31,0:31:93.31:0,93,5055	0/0:31,0:31:93.32:0,93,5315	0/0:4,0:4:12.04:0,12,711
chr10	53677977	.	AACACAC	A	835.41	PASS	AB=0.901;AC=17;AF=0.340;AN=50;BaseQRankSum=6.124;DP=508;FS=0.000;HRun=0;HaplotypeScore=118.9389;InbreedingCoeff=0.5830;MQ=59.11;MQ0=5;MQRankSum=-4.502;QD=4.40;ReadPosRankSum=-1.860;VQSLOD=1.7165;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:12.02:0,12,270	0/0:14,0:14:20.95:0,21,525	./.	./.	0/0:13,0:15:8.10:0,8,124	0/0:14,0:18:11.98:0,12,107	0/0:24,0:25:17.94:0,18,254	0/0:21,0:20:0:0,0,0	1/1:19,2:21:6.02:102,6,0	1/1:14,8:21:3.42:122,3,0	0/1:16,5:22:9.30:30,0,9	0/0:16,0:16:11.81:0,12,234	0/0:6,0:11:10.59:0,11,243	0/0:10,0:12:6:0,6,62	0/0:16,0:16:14.90:0,15,261	0/0:15,0:17:17.14:0,17,394	1/1:16,0:17:6.02:84,6,0	0/1:19,0:22:15.26:113,0,15	./.	1/1:19,5:24:12.04:240,12,0	0/1:9,0:9:0:0,0,0	0/0:16,0:16:20.85:0,21,481	0/0:16,0:18:9.03:0,9,208	0/0:21,0:21:24.08:0,24,681	0/0:26,0:26:15.02:0,15,225	1/1:13,0:20:5.93:59,6,0	1/1:15,1:20:12.04:204,12,0	1/1:7,0:11:2.52:41,3,0
chr10	53679637	.	A	AAAAG	2607.25	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-3.716;DP=687;FS=10.700;HRun=0;HaplotypeScore=110.2310;InbreedingCoeff=0.9992;MQ=78.04;MQ0=0;MQRankSum=-7.234;QD=70.47;ReadPosRankSum=-4.980;VQSLOD=3.6917;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,102,1855	0/0:11,0:11:33.11:0,33,640	0/0:25,0:24:69.24:0,69,1301	0/0:25,0:25:56.80:0,57,1001	0/0:24,0:24:72.25:0,72,1387	0/0:27,0:27:81.21:0,81,1477	0/0:33,0:33:93.29:0,93,1734	1/1:13,22:37:99:2702,105,0	0/0:21,0:21:54.17:0,54,997	0/0:18,0:18:54.18:0,54,1016	0/0:20,0:20:57.20:0,57,1105	0/0:28,0:28:81.26:0,81,1522	0/0:28,0:28:78.27:0,78,1512	0/0:21,0:21:63.20:0,63,1180	0/0:34,0:34:87.28:0,87,1653	0/0:28,0:28:81.26:0,81,1537	0/0:25,0:25:69.23:0,69,1319	0/0:17,0:17:48.12:0,48,842	0/0:21,0:21:57.16:0,57,1051	0/0:29,0:29:81.26:0,81,1474	0/0:31,0:31:84.29:0,84,1628	0/0:27,0:27:81.25:0,81,1504	0/0:23,0:23:57.20:0,57,1081	0/0:11,0:11:30.06:0,30,543	0/0:22,0:22:66.23:0,66,1247	0/0:24,0:24:69.21:0,69,1254	0/0:21,0:21:63.22:0,63,1195	0/0:21,0:21:60.21:0,60,1161
chr10	53679785	.	G	GGTGTGTGTGT	5335.54	PASS	AB=0.745;AC=30;AF=0.577;AN=52;BaseQRankSum=2.753;DP=611;FS=4.317;HRun=0;HaplotypeScore=193.1204;InbreedingCoeff=0.7045;MQ=63.20;MQ0=21;MQRankSum=-5.426;QD=13.72;ReadPosRankSum=-3.019;VQSLOD=3.5354;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:21:26.87:0,27,461	0/0:10,0:11:24.06:0,24,567	./.	./.	1/1:20,0:24:12.21:308,12,0	1/1:21,7:27:12.04:423,12,0	1/1:21,0:21:18.06:409,18,0	1/1:29,0:29:18.03:222,18,0	1/1:16,0:20:15.05:311,15,0	1/1:25,0:31:38.39:633,38,0	0/1:6,0:17:17.64:175,0,18	0/0:24,0:24:14.34:0,14,919	0/0:14,0:15:6.44:0,6,517	0/1:17,0:15:0:0,0,0	0/0:27,0:29:30.10:0,30,862	0/0:21,0:22:33.09:0,33,741	0/1:17,0:26:2.09:271,0,2	1/1:9,0:15:15.05:370,15,0	1/1:19,0:21:13.29:196,13,0	0/1:9,0:19:14.92:191,0,15	1/1:24,0:30:17.79:321,18,0	0/0:12,0:12:12.03:0,12,219	0/0:12,0:12:8.06:0,8,265	0/0:25,0:26:50.95:0,51,1283	1/1:13,4:19:15.05:610,15,0	1/1:12,0:25:35.44:537,35,0	1/1:13,0:24:15.11:230,15,0	1/1:7,0:9:11.58:128,12,0
chr10	53681064	.	GGAGA	G	10153.85	PASS	AB=1.000;AC=31;AF=0.554;AN=56;BaseQRankSum=8.636;DP=827;FS=26.472;HRun=0;HaplotypeScore=140.6401;InbreedingCoeff=0.9135;MQ=62.70;MQ0=31;MQRankSum=-1.569;QD=21.65;ReadPosRankSum=-0.336;VQSLOD=2.5555;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:52:99:0,123,2658	0/0:12,0:13:23.82:0,24,526	0/0:69,0:18:11.97:0,12,357	0/1:96,0:26:12.99:13,0,310	1/1:10,16:26:42.14:702,42,0	1/1:4,20:26:51.16:799,51,0	1/1:8,15:24:17.22:558,17,0	1/1:14,17:33:59.41:870,59,0	1/1:3,17:19:36.12:602,36,0	1/1:4,22:26:69.22:1108,69,0	1/1:4,10:14:15.05:242,15,0	0/0:30,0:30:75.24:0,75,1762	0/0:23,0:24:50.91:0,51,1165	1/1:7,11:19:33.11:530,33,0	0/0:29,0:29:69.22:0,69,1644	0/0:21,0:23:47.89:0,48,1049	0/0:7,0:32:60.38:0,60,273	0/0:8,0:26:8.52:0,9,165	1/1:13,10:23:30:436,30,0	1/1:7,14:21:33.10:511,33,0	1/1:9,20:29:39.13:652,39,0	0/0:13,0:14:29.81:0,30,553	0/0:17,0:19:41.60:0,42,853	0/0:24,0:25:60.81:0,61,1312	1/1:13,18:31:48.16:772,48,0	1/1:12,22:36:72.15:1056,72,0	1/1:9,24:31:54.18:903,54,0	1/1:0,10:10:24.08:401,24,0
chr10	53681839	.	GA	G	974.90	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=-2.147;DP=536;FS=6.443;HRun=6;HaplotypeScore=92.9187;InbreedingCoeff=0.6447;MQ=64.87;MQ0=0;MQRankSum=0.314;QD=23.21;ReadPosRankSum=-4.255;VQSLOD=1.3880;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:36.07:0,36,454	0/0:13,0:13:36.08:0,36,455	0/1:2,0:2:3.57:4,0,20	0/0:4,0:4:2.94:0,3,18	0/0:33,0:33:87.27:0,87,1112	0/0:31,0:31:78.38:0,78,967	0/0:13,0:13:36.06:0,36,409	1/1:5,35:40:99:1069,105,0	0/0:19,0:19:57.16:0,57,721	0/0:11,0:11:30.03:0,30,342	0/0:18,0:18:38.50:0,38,571	0/0:14,0:14:42.14:0,42,552	0/0:27,0:27:69.20:0,69,875	0/0:22,0:22:66.20:0,66,825	0/0:17,0:17:51.15:0,51,643	0/0:23,0:23:63.18:0,63,801	0/0:18,0:18:51.15:0,51,655	0/0:16,0:16:48.16:0,48,631	0/0:25,0:25:60.11:0,60,703	0/0:24,0:24:66.17:0,66,813	0/0:11,0:11:30.08:0,30,374	0/0:17,0:17:44.23:0,44,576	0/0:29,0:29:78.24:0,78,1010	0/0:10,0:10:27.07:0,27,340	0/0:18,0:18:54.15:0,54,670	0/0:23,0:23:66.17:0,66,811	0/0:32,0:32:93.30:0,93,1188	0/0:14,0:14:42.06:0,42,493
chr10	53682943	.	C	CAA	5519.51	PASS	AB=0.875;AC=33;AF=0.589;AN=56;BaseQRankSum=1.984;DP=623;FS=6.722;HRun=14;HaplotypeScore=99.8948;InbreedingCoeff=0.7807;MQ=56.93;MQ0=4;MQRankSum=-2.673;QD=13.76;ReadPosRankSum=-5.223;VQSLOD=2.4577;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:43:63.81:0,64,581	0/0:5,0:7:2.90:0,3,105	0/0:8,0:5:2.28:0,2,24	0/1:6,0:6:4.32:4,0,35	1/1:13,13:31:30.60:322,31,0	1/1:2,9:12:9.02:107,9,0	1/1:8,12:20:21.68:243,22,0	1/1:15,7:28:44.41:476,44,0	1/1:4,13:20:23.43:258,23,0	1/1:15,15:33:20.93:580,21,0	1/1:13,10:25:36.90:372,37,0	0/0:16,0:16:16.01:0,16,190	0/0:20,0:20:26.13:0,26,212	1/1:5,10:16:21.06:257,21,0	0/0:24,0:31:22.01:0,22,317	0/0:22,0:24:50.05:0,50,399	1/1:13,15:32:42.58:445,43,0	1/1:9,2:20:25.51:207,26,0	1/1:14,7:23:10.12:294,10,0	1/1:8,9:15:40.90:481,41,0	1/1:4,15:21:15.05:196,15,0	0/0:28,0:29:53.61:0,54,490	0/0:20,0:22:32.31:0,32,262	0/0:19,0:20:41.47:0,41,338	0/1:12,16:30:8.77:372,0,9	1/1:19,9:31:47.38:440,47,0	1/1:6,12:20:38.88:463,39,0	0/1:5,0:5:0:0,0,0
chr10	53684200	.	GGGGATCCA	G	2055.80	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.267;DP=761;FS=2.497;HRun=0;HaplotypeScore=183.1681;InbreedingCoeff=0.9993;MQ=84.42;MQ0=0;MQRankSum=-8.727;QD=48.95;ReadPosRankSum=3.016;VQSLOD=3.8044;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,120,4719	0/0:17,0:17:48.16:0,48,1961	0/0:27,0:27:74.06:0,74,2879	0/0:20,0:20:57.13:0,57,1958	0/0:40,0:40:99:0,111,4707	0/0:21,0:21:63.20:0,63,2584	0/0:36,0:36:99:0,108,4079	0/0:29,0:29:84.29:0,84,3430	0/0:24,0:24:69.24:0,69,2928	0/0:44,0:44:99:0,129,5280	0/0:22,0:22:63.22:0,63,2624	0/0:28,0:28:78.27:0,78,3074	0/0:24,0:24:72.25:0,72,3066	0/0:21,0:21:63.20:0,63,2620	0/0:38,0:38:99:0,111,4739	0/0:29,0:29:84.29:0,84,3642	1/1:1,26:27:54.18:1442,54,0	1/1:0,15:15:27.09:735,27,0	0/0:24,0:24:69.24:0,69,2600	0/0:21,0:21:63.22:0,63,2690	0/0:27,0:27:78.27:0,78,3050	0/0:29,0:29:78.27:0,78,3194	0/0:33,0:33:93.31:0,93,3873	0/0:21,0:21:63.22:0,63,2551	0/0:30,0:30:90.31:0,90,3917	0/0:33,0:33:99:0,99,4161	0/0:27,0:27:81.28:0,81,3416	0/0:11,0:11:33.11:0,33,1454
chr10	53684690	.	G	GA	1147.20	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-7.806;DP=629;FS=4.493;HRun=4;HaplotypeScore=64.9673;InbreedingCoeff=0.9650;MQ=83.26;MQ0=0;MQRankSum=-0.403;QD=31.87;ReadPosRankSum=-4.248;VQSLOD=2.1966;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,123,1360	0/0:7,0:7:15.03:0,15,160	0/0:22,0:22:53.94:0,54,587	0/0:20,0:19:42.12:0,42,472	0/0:20,0:20:57.16:0,57,646	0/0:28,0:28:84.20:0,84,924	0/0:25,0:25:63.16:0,63,705	1/1:5,31:36:93.29:1242,93,0	0/0:21,0:21:57.15:0,57,637	0/0:30,0:30:77.80:0,78,847	0/0:10,0:10:30.09:0,30,338	0/0:27,0:27:81.23:0,81,918	0/0:25,0:25:72.18:0,72,804	0/0:15,0:15:42.12:0,42,476	0/0:21,0:21:51.11:0,51,559	0/0:23,0:23:66.14:0,66,721	0/0:32,0:32:93.22:0,93,1033	0/0:22,0:22:60.14:0,60,667	0/0:8,0:8:21.06:0,21,238	0/0:28,0:28:75.21:0,75,850	0/0:32,0:32:84.24:0,84,952	0/0:17,0:17:48.14:0,48,544	0/0:13,0:13:39.10:0,39,431	0/0:21,0:21:57.16:0,57,647	0/0:27,0:27:72.16:0,72,795	0/0:23,0:23:66.18:0,66,740	0/0:24,0:24:66.15:0,66,727	0/0:6,0:6:15.04:0,15,170
chr10	53685913	.	AAC	A	2087.23	PASS	AB=0.871;AC=39;AF=0.848;AN=46;BaseQRankSum=3.781;DP=558;FS=2.991;HRun=0;HaplotypeScore=102.2427;InbreedingCoeff=-0.2102;MQ=69.39;MQ0=18;MQRankSum=-0.583;QD=4.63;ReadPosRankSum=3.110;VQSLOD=2.7629;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:32,2:34:44.01:44,0,175	0/1:5,0:6:35.59:37,0,36	./.	./.	1/1:16,2:21:29.52:215,30,0	1/1:13,4:17:9.50:98,9,0	1/1:16,1:17:3.01:33,3,0	./.	1/1:14,5:19:2.57:205,3,0	1/1:25,0:25:20.50:132,21,0	1/1:17,0:21:14.61:91,15,0	0/1:20,0:21:28:90,0,28	1/1:11,1:13:17.71:158,18,0	1/1:5,2:7:1.72:30,2,0	0/1:20,2:21:14.49:14,0,160	0/1:21,3:24:64.77:65,0,266	0/1:16,0:21:5.04:25,0,5	1/1:6,0:8:5.68:28,6,0	1/1:13,0:12:11.80:86,12,0	1/1:24,0:26:25.53:153,26,0	./.	0/1:16,12:28:6.12:126,0,6	1/1:14,7:22:14.87:144,15,0	1/1:20,13:33:17.71:158,18,0	1/1:10,1:13:11.98:109,12,0	1/1:12,1:15:17.17:83,17,0	1/1:16,0:17:10.24:87,10,0	./.
chr10	53685963	.	G	GAC	760.82	PASS	AB=0.957;AC=10;AF=0.185;AN=54;BaseQRankSum=6.056;DP=673;FS=0.000;HRun=0;HaplotypeScore=160.0600;InbreedingCoeff=0.0568;MQ=44.17;MQ0=35;MQRankSum=-6.959;QD=3.46;ReadPosRankSum=-2.712;VQSLOD=2.4287;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:41:84.19:0,84,1137	0/0:9,0:9:13.70:0,14,210	0/0:12,0:8:23.56:0,24,287	0/0:22,0:9:14.91:0,15,215	0/0:30,0:27:18.75:0,19,121	0/0:22,0:22:10.74:0,11,50	0/0:22,0:21:2.58:0,3,14	0/1:38,16:52:99:339,0,872	0/0:23,0:21:17.25:0,17,121	0/1:29,0:25:0.07:0,0,341	0/0:24,0:24:6.02:0,6,96	0/0:18,0:16:42.09:0,42,534	0/0:15,0:13:38.26:0,38,456	0/1:18,0:18:7.46:14,0,7	0/0:25,0:25:54.13:0,54,725	0/0:29,0:29:78.22:0,78,1092	0/1:17,0:15:17.05:57,0,17	0/1:7,0:5:5.64:70,0,6	0/0:19,0:17:25.79:0,26,412	0/1:29,1:32:99:134,0,109	./.	0/0:25,0:23:47.99:0,48,650	0/0:28,0:28:56.97:0,57,742	0/0:43,0:39:92.78:0,93,1296	0/0:24,0:24:8.32:0,8,50	0/1:26,0:25:73.52:74,0,396	0/1:30,0:31:99:114,0,279	1/1:6,0:5:9.02:98,9,0
chr10	53685987	.	CACAGAG	C	3096.77	PASS	AB=0.746;AC=18;AF=0.346;AN=52;BaseQRankSum=8.868;DP=716;FS=0.920;HRun=0;HaplotypeScore=224.5715;InbreedingCoeff=0.0489;MQ=49.35;MQ0=21;MQRankSum=-9.275;QD=9.38;ReadPosRankSum=-1.157;VQSLOD=2.6762;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:47:99:0,102,3336	0/0:7,0:7:15.05:0,15,510	0/0:33,0:20:14.55:0,15,998	0/0:65,0:32:65.42:0,65,1571	0/1:15,10:23:0.14:0,0,0	0/1:17,7:24:18.93:39,0,19	1/1:5,13:18:2.81:19,3,0	0/1:46,0:45:99:112,0,615	0/1:8,8:14:4.11:81,0,4	0/1:15,11:24:4.67:805,0,5	./.	0/0:20,0:20:53.82:0,54,1642	0/0:15,0:15:42.11:0,42,1286	1/1:9,10:19:1.61:54,2,0	0/0:28,0:28:67.13:0,67,2140	0/0:33,0:33:93.31:0,93,2816	0/1:16,0:16:54.94:83,0,55	1/1:6,0:5:8.28:46,8,0	0/1:6,11:16:42.42:402,0,42	0/1:13,17:29:31.57:89,0,32	./.	0/0:27,0:25:71.25:0,71,2144	0/0:31,0:31:83.60:0,84,2407	0/0:42,0:42:99:0,120,3928	0/1:19,6:25:0:0,0,1	0/1:13,10:22:99:641,0,132	0/1:21,13:34:99:671,0,143	0/1:2,2:5:28.02:206,0,28
chr10	53685999	.	GAC	G	1479.05	PASS	AB=1.000;AC=27;AF=0.519;AN=52;BaseQRankSum=11.920;DP=709;FS=10.539;HRun=0;HaplotypeScore=191.1934;InbreedingCoeff=0.6883;MQ=56.56;MQ0=14;MQRankSum=-11.235;QD=5.28;ReadPosRankSum=-1.368;VQSLOD=1.6367;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:45:99:0,112,1764	0/0:8,0:8:21.04:0,21,314	0/0:45,0:26:38.72:0,39,521	0/0:77,0:42:68.71:0,69,1025	0/0:22,0:22:0:0,0,0	1/1:22,0:22:2.92:25,3,0	1/1:20,0:20:2.56:17,3,0	1/1:37,0:37:9.32:293,9,0	1/1:14,0:14:8.51:71,9,0	1/1:26,0:25:12.91:261,13,0	./.	0/0:23,0:23:65.85:0,66,1052	0/0:17,0:17:42.06:0,42,605	1/1:16,1:17:2.97:40,3,0	0/0:22,0:22:60:0,60,934	0/0:39,0:39:96.24:0,96,1575	1/1:12,4:17:0.04:112,0,0	1/1:3,0:3:5.82:42,6,0	1/1:14,0:13:2.33:82,2,0	1/1:24,0:23:8.78:60,9,0	./.	0/0:27,0:25:65.78:0,66,1061	0/0:26,0:26:66.02:0,66,900	0/0:47,0:47:99:0,129,1883	1/1:24,0:24:0.33:0,0,0	1/1:22,0:22:27.50:265,27,0	1/1:33,1:34:24.64:317,25,0	0/1:5,0:5:8.18:71,0,8
chr10	53686003	.	CACAG	C	2646.50	PASS	AB=0.774;AC=19;AF=0.365;AN=52;BaseQRankSum=10.717;DP=692;FS=0.466;HRun=0;HaplotypeScore=202.9934;InbreedingCoeff=0.2313;MQ=60.03;MQ0=13;MQRankSum=-10.838;QD=10.06;ReadPosRankSum=1.089;VQSLOD=2.6316;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,114,2966	0/0:8,0:8:21.07:0,21,566	0/0:44,0:27:50.21:0,50,1003	0/0:82,0:43:89.34:0,89,1840	0/0:13,9:22:0:0,0,0	1/1:7,15:22:2.74:58,3,0	1/1:10,8:18:2.84:47,3,0	0/1:34,0:32:76.89:77,0,364	1/1:10,4:14:9.03:149,9,0	0/1:12,12:24:66.27:667,0,66	./.	0/0:24,0:24:68.85:0,69,1803	0/0:17,1:18:48.14:0,48,1113	1/1:13,4:17:2.84:21,3,0	0/0:23,0:23:66.02:0,66,1545	0/0:38,0:38:99:0,110,2764	0/1:15,0:15:18.41:18,0,140	0/0:4,0:4:8.60:0,9,49	0/1:9,4:12:49.77:219,0,50	1/1:17,6:22:8.90:95,9,0	./.	0/0:26,0:24:65.81:0,66,1733	0/0:23,0:23:66.07:0,66,1373	0/0:45,0:45:99:0,132,3321	1/1:12,14:26:0.03:1,0,0	0/1:10,12:22:19.41:604,0,19	0/1:12,18:30:26.57:719,0,27	0/1:3,2:5:18.19:128,0,18
chr10	53686018	.	AGC	A	2581.60	PASS	AB=0.846;AC=29;AF=0.537;AN=54;BaseQRankSum=14.252;DP=661;FS=0.840;HRun=0;HaplotypeScore=190.9272;InbreedingCoeff=0.6809;MQ=68.66;MQ0=5;MQRankSum=-11.363;QD=8.90;ReadPosRankSum=-2.060;VQSLOD=2.8956;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,121,2182	0/0:11,0:11:27.05:0,27,461	0/0:51,0:36:37.87:0,38,989	0/0:84,0:53:28.87:0,29,1082	1/1:13,8:21:5.80:80,6,0	1/1:10,14:24:11.96:160,12,0	1/1:12,6:18:9.49:116,9,0	1/1:21,0:19:0.41:158,0,0	1/1:8,4:12:8.61:74,9,0	1/1:20,6:26:41.16:480,41,0	1/1:12,4:16:3.01:40,3,0	0/0:27,0:27:74.94:0,75,1293	0/0:16,0:16:45.15:0,45,833	1/1:10,6:16:5.93:57,6,0	0/0:21,0:21:63.18:0,63,1133	0/0:33,1:34:99:0,99,1810	0/1:14,0:14:0.17:57,0,0	1/1:5,0:5:9.25:47,9,0	0/1:11,4:15:22.47:218,0,22	1/1:17,6:23:15.42:158,15,0	./.	0/0:21,0:21:63.11:0,63,1051	0/0:16,0:16:48.16:0,48,847	0/0:40,0:40:99:0,108,1882	1/1:11,13:24:3.34:40,3,0	1/1:9,9:18:25.67:422,26,0	1/1:16,15:31:47.68:618,48,0	0/1:4,2:6:7.21:55,0,7
chr10	53686023	.	GACAC	G	2417.58	PASS	AB=0.908;AC=24;AF=0.444;AN=54;BaseQRankSum=12.202;DP=673;FS=5.506;HRun=0;HaplotypeScore=212.0348;InbreedingCoeff=0.2988;MQ=70.29;MQ0=4;MQRankSum=-9.510;QD=8.03;ReadPosRankSum=-1.333;VQSLOD=2.4609;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,123,2820	0/0:8,0:8:24.08:0,24,605	0/0:55,0:40:74.32:0,74,1660	0/0:79,0:51:43.32:0,43,1383	1/1:20,1:21:5.34:43,5,0	1/1:23,2:25:14.61:137,15,0	1/1:15,4:19:9.46:104,9,0	0/1:22,0:20:78.74:79,0,86	1/1:13,0:13:5.97:95,6,0	0/1:22,2:26:54.84:426,0,55	1/1:12,2:15:3.01:47,3,0	0/0:26,0:26:74.79:0,75,1799	0/0:17,0:17:48.16:0,48,1139	1/1:15,0:16:7.11:58,7,0	0/0:20,0:20:60.18:0,60,1520	0/0:36,0:36:99:0,102,2515	0/1:15,0:15:70.83:71,0,131	0/1:4,0:5:12.38:57,0,12	0/1:15,1:16:99:223,0,178	1/1:24,0:24:14.24:137,14,0	./.	0/0:19,0:19:54.17:0,54,1295	0/0:18,0:18:51.15:0,51,1135	0/0:40,0:40:99:0,111,2528	1/1:22,3:26:6.29:47,6,0	0/1:15,2:18:33.66:493,0,34	0/1:29,3:33:47.09:547,0,47	0/1:6,0:7:41.18:41,0,97
chr10	53686029	.	CAG	C	538.49	PASS	AB=0.991;AC=16;AF=0.286;AN=56;BaseQRankSum=9.416;DP=664;FS=18.357;HRun=0;HaplotypeScore=196.2779;InbreedingCoeff=-0.0921;MQ=70.43;MQ0=4;MQRankSum=-5.657;QD=1.89;ReadPosRankSum=2.152;VQSLOD=1.1388;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:45,2:47:17.48:0,17,1266	0/0:8,0:8:21.07:0,21,341	0/0:53,1:39:18.51:0,19,771	0/0:70,0:47:44.65:0,45,531	1/1:19,0:19:5.49:31,5,0	0/1:25,0:25:9.12:57,0,9	0/1:21,0:21:12.83:58,0,13	0/0:23,0:21:26.99:0,27,239	1/1:12,0:12:5.55:29,6,0	0/1:22,0:22:87.39:87,0,93	0/1:14,0:14:15.98:17,0,16	0/1:23,3:26:7.36:7,0,889	0/0:18,1:19:8.46:0,8,588	0/1:18,0:18:13.36:13,0,41	0/0:19,1:20:20.51:0,21,816	0/0:34,0:34:84.29:0,84,1360	0/0:17,0:17:5.51:0,6,170	0/0:6,0:6:6.16:0,6,37	0/1:21,0:21:4.31:4,0,280	0/1:21,0:21:29.41:35,0,29	0/0:8,0:7:2.99:0,3,25	0/0:18,0:18:42.12:0,42,650	0/0:16,1:17:2.45:0,2,521	0/0:36,1:37:47.59:0,48,1218	0/1:28,0:28:3.11:3,0,63	0/1:18,0:18:41.58:132,0,42	0/1:33,0:33:28.61:210,0,29	0/1:7,0:7:4.64:5,0,96
chr10	53686036	.	A	AGAGAGAGA	6509.10	PASS	AB=1.000;AC=33;AF=0.589;AN=56;BaseQRankSum=9.053;DP=675;FS=8.070;HRun=0;HaplotypeScore=243.0909;InbreedingCoeff=0.7992;MQ=73.47;MQ0=4;MQRankSum=-9.446;QD=19.31;ReadPosRankSum=-4.940;VQSLOD=2.2418;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:89.03:0,89,2266	0/0:7,0:7:21.07:0,21,547	0/0:55,0:41:63.10:0,63,1314	0/0:66,0:45:0.48:0,0,551	1/1:18,0:18:6.02:138,6,0	1/1:24,0:24:18.51:403,19,0	1/1:26,0:26:15.94:309,16,0	1/1:31,0:30:27.54:369,28,0	1/1:12,4:17:6.02:207,6,0	1/1:24,0:24:42.22:885,42,0	1/1:12,0:12:5.93:98,6,0	0/0:25,0:25:66.21:0,66,1611	0/0:22,0:22:45.15:0,45,1084	1/1:16,0:16:12.49:245,12,0	0/0:21,0:21:54.18:0,54,1384	0/0:31,0:31:84.29:0,84,2135	0/1:16,0:16:16.67:156,0,17	1/1:8,0:8:8.61:75,9,0	1/1:25,0:25:39.49:720,39,0	1/1:23,0:23:18.53:409,19,0	1/1:11,0:11:3:25,3,0	0/0:17,0:17:36.12:0,36,937	0/0:14,0:14:39.12:0,39,920	0/0:35,0:35:84.24:0,84,2005	1/1:27,0:27:12.21:214,12,0	1/1:20,0:20:44.71:909,45,0	1/1:31,0:31:51.11:1113,51,0	1/1:7,0:7:11.53:232,12,0
chr10	53686305	.	CTT	C	7623.28	PASS	AB=0.818;AC=33;AF=0.589;AN=56;BaseQRankSum=7.686;DP=676;FS=0.000;HRun=13;HaplotypeScore=94.3485;InbreedingCoeff=0.9406;MQ=69.86;MQ0=1;MQRankSum=-1.691;QD=19.01;ReadPosRankSum=5.808;VQSLOD=4.1694;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:75.15:0,75,961	0/1:7,1:9:5.54:6,0,245	0/0:13,0:12:20.96:0,21,226	0/0:13,0:13:20.12:0,20,197	1/1:5,19:24:47.99:465,48,0	1/1:5,24:29:60.08:582,60,0	1/1:3,20:24:41.94:457,42,0	0/0:28,0:33:73.14:0,73,864	1/1:8,17:27:53.48:489,53,0	1/1:5,13:19:35.73:332,36,0	1/1:4,22:26:57.06:553,57,0	0/0:20,0:24:46.57:0,47,563	0/0:22,1:24:57.17:0,57,787	1/1:5,22:28:41.66:439,42,0	0/0:27,0:31:71.70:0,72,950	0/0:30,0:31:83.59:0,84,1099	1/1:6,19:25:54.07:524,54,0	1/1:3,11:16:26.64:294,27,0	1/1:9,21:30:55.20:526,55,0	1/1:5,26:31:68.80:652,69,0	1/1:4,11:15:30.03:291,30,0	0/0:19,0:23:52.63:0,53,659	0/0:25,1:30:38.93:0,39,786	0/0:20,0:23:50.12:0,50,635	1/1:4,21:27:44.75:469,45,0	1/1:5,24:30:76.03:707,76,0	1/1:7,24:31:62.99:605,63,0	1/1:1,8:9:24.02:233,24,0
chr10	53686643	.	AAC	A	10341.24	PASS	AB=0.935;AC=37;AF=0.661;AN=56;BaseQRankSum=14.102;DP=852;FS=10.264;HRun=0;HaplotypeScore=105.8709;InbreedingCoeff=0.7358;MQ=68.14;MQ0=11;MQRankSum=-0.089;QD=17.12;ReadPosRankSum=0.486;VQSLOD=4.6191;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:47,3:50:37.09:37,0,1384	0/0:9,0:9:21.07:0,21,335	0/0:45,0:27:35.70:0,36,414	0/0:40,0:23:31.81:0,32,364	1/1:9,35:45:78.24:947,78,0	1/1:4,22:27:50.95:581,51,0	1/1:8,18:28:15.47:388,15,0	1/1:14,24:38:66.16:772,66,0	1/1:9,21:31:50.48:565,50,0	1/1:8,36:46:65.36:1209,65,0	1/1:3,11:15:20.58:232,21,0	0/0:28,0:28:23.79:0,24,851	0/0:29,3:32:5.46:0,5,1078	1/1:5,29:35:63.02:742,63,0	0/0:28,1:29:32.49:0,32,972	0/1:31,6:37:58.36:58,0,1068	1/1:12,31:43:69:814,69,0	1/1:4,17:21:31.69:398,32,0	1/1:9,13:21:38.89:406,39,0	1/1:4,25:31:59.85:683,60,0	1/1:9,26:35:47.82:556,48,0	0/0:35,0:35:96.33:0,96,1546	0/1:19,0:19:33.51:34,0,489	0/0:29,1:30:38.85:0,39,1106	1/1:6,18:25:50.77:547,51,0	1/1:6,22:28:66.20:799,66,0	1/1:4,11:16:35.77:391,36,0	1/1:3,6:9:15.05:182,15,0
chr10	53688535	.	C	CGTGTGT	1824.12	PASS	AB=0.746;AC=28;AF=0.538;AN=52;BaseQRankSum=0.580;DP=510;FS=3.517;HRun=0;HaplotypeScore=107.0414;InbreedingCoeff=0.5358;MQ=57.60;MQ0=10;MQRankSum=-2.699;QD=5.41;ReadPosRankSum=-3.799;VQSLOD=0.4437;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:32:17.99:0,18,575	0/0:4,0:4:9.03:0,9,136	./.	./.	0/1:7,5:12:0:0,0,0	1/1:9,8:17:3.01:89,3,0	1/1:13,12:28:6.02:78,6,0	1/1:34,0:32:22.08:152,22,0	1/1:8,0:8:9.03:157,9,0	1/1:10,0:10:20.83:296,21,0	0/1:4,6:12:0.01:1,0,0	0/0:16,0:16:15.04:0,15,256	0/1:11,0:12:48.70:49,0,181	1/1:5,0:9:6.02:117,6,0	0/0:17,0:19:15.34:0,15,333	0/0:11,0:11:18.05:0,18,279	0/1:28,0:32:50.23:50,0,144	0/1:14,0:25:6.39:6,0,237	1/1:18,0:17:25.63:430,26,0	0/0:7,0:7:0:0,0,0	1/1:25,0:56:4.73:54,5,0	0/0:15,0:15:12.64:0,13,349	0/0:12,0:11:16.87:0,17,300	0/0:18,0:18:24.07:0,24,456	0/1:6,6:13:0:0,0,0	1/1:21,0:22:30.03:400,30,0	1/1:11,0:11:6.47:72,6,0	1/1:9,0:13:4.59:44,5,0
chr10	53688684	.	G	GTTATTATTA	3595.67	PASS	AC=32;AF=0.640;AN=50;BaseQRankSum=6.147;DP=272;FS=3.273;HRun=0;HaplotypeScore=79.1798;InbreedingCoeff=0.7169;MQ=54.67;MQ0=0;MQRankSum=-3.221;QD=19.65;ReadPosRankSum=-0.951;VQSLOD=1.9676;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:39.05:0,39,930	0/0:8,0:8:21.01:0,21,350	./.	./.	1/1:6,0:7:2.84:14,3,0	1/1:5,0:12:19.21:97,19,0	./.	1/1:43,0:43:69.76:601,70,0	1/1:1,0:2:2.88:15,3,0	1/1:12,0:12:12.03:268,12,0	1/1:9,1:10:3.01:84,3,0	0/0:11,0:11:15.04:0,15,361	0/0:10,0:10:24.05:0,24,542	1/1:1,0:4:5.75:31,6,0	0/0:8,0:8:14.99:0,15,182	0/0:9,0:9:12.04:0,12,336	1/1:15,0:15:36.34:501,36,0	1/1:4,0:11:3.01:118,3,0	1/1:5,5:10:15:281,15,0	1/1:1,4:6:5.95:155,6,0	1/1:0,0:4:3.01:65,3,0	0/0:5,0:5:3.01:0,3,84	0/0:9,0:9:15:0,15,230	0/0:2,0:2:3.01:0,3,84	1/1:8,0:16:23.18:134,23,0	1/1:6,4:10:9.03:411,9,0	1/1:4,6:10:12.04:547,12,0	1/1:9,2:11:6.02:274,6,0
chr10	53690585	.	T	TG	991.62	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-6.181;DP=776;FS=0.675;HRun=7;HaplotypeScore=129.2132;InbreedingCoeff=0.8985;MQ=87.55;MQ0=0;MQRankSum=-1.911;QD=26.10;ReadPosRankSum=-4.692;VQSLOD=0.8232;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,120,1159	0/0:2,0:2:6.01:0,6,58	0/0:30,0:30:65.51:0,66,609	0/0:25,0:25:60.66:0,61,544	0/0:26,0:26:72.11:0,72,695	0/0:24,0:24:69.11:0,69,666	0/0:23,0:23:66.03:0,66,611	1/1:7,31:38:93.24:1086,93,0	0/0:27,0:27:78.12:0,78,753	0/0:26,0:26:69.11:0,69,666	0/0:27,0:27:72.11:0,72,695	0/0:37,0:37:96.14:0,96,921	0/0:35,0:35:99:0,102,979	0/0:36,0:36:99:0,105,1007	0/0:34,0:34:90.10:0,90,868	0/0:26,0:26:75.12:0,75,724	0/0:21,0:21:57.09:0,57,550	0/0:20,0:20:54.09:0,54,521	0/0:32,0:32:90.01:0,90,855	0/0:34,0:34:93.15:0,93,898	0/0:39,0:40:99:0,101,956	0/0:23,0:23:60.08:0,60,575	0/0:27,0:27:72.11:0,72,694	0/0:25,0:24:68.96:0,69,666	0/0:22,0:22:66.11:0,66,637	0/0:29,0:29:81.12:0,81,782	0/0:39,0:39:99:0,105,1014	0/0:6,0:6:18.03:0,18,174
chr10	53690845	.	G	GA	17322.96	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=16.845;DP=837;FS=0.521;HRun=1;HaplotypeScore=103.5122;InbreedingCoeff=0.9851;MQ=84.27;MQ0=0;MQRankSum=-2.515;QD=40.95;ReadPosRankSum=2.824;VQSLOD=4.8511;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,150,1900	0/0:7,0:7:21.07:0,21,273	0/0:33,0:33:92.87:0,93,1107	0/0:21,0:21:50.14:0,50,605	1/1:2,27:29:78.26:1162,78,0	1/1:1,33:34:96.33:1438,96,0	1/1:1,27:28:69.23:1034,69,0	0/0:45,0:45:99:0,126,1589	1/1:1,50:51:99:2198,147,0	1/1:0,24:24:72.23:1056,72,0	1/1:0,20:19:57.15:818,57,0	0/0:25,0:25:75.22:0,75,947	0/0:27,0:27:78.23:0,78,985	1/1:1,23:24:66.22:989,66,0	0/0:30,0:30:90.28:0,90,1153	0/0:32,1:33:51.34:0,51,1148	0/0:36,0:36:99:0,108,1370	0/0:14,0:14:39.09:0,39,488	1/1:1,28:30:87.26:1248,87,0	1/1:1,40:41:99:1567,108,0	1/1:1,43:44:99:1708,114,0	0/0:29,0:29:87.28:0,87,1122	0/0:22,0:22:63.18:0,63,801	0/0:38,0:37:99:0,111,1421	1/1:1,16:17:45.15:674,45,0	1/1:0,43:43:99:1909,129,0	1/1:1,33:34:96.32:1434,96,0	1/1:2,2:4:6.02:90,6,0
chr10	53691408	.	ATCTGACC	A	11848.53	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=14.956;DP=724;FS=1.193;HRun=0;HaplotypeScore=174.9315;InbreedingCoeff=0.9778;MQ=72.00;MQ0=1;MQRankSum=-15.134;QD=30.46;ReadPosRankSum=0.274;VQSLOD=4.6867;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:61,0:61:99:0,138,4851	0/0:14,0:14:33.11:0,33,1221	0/0:31,0:29:19.39:0,19,573	0/0:45,0:41:50.81:0,51,1321	1/1:13,21:34:39.13:897,39,0	1/1:8,16:24:39.13:897,39,0	1/1:9,11:20:18.02:364,18,0	1/1:21,9:30:24.04:390,24,0	1/1:7,12:19:36.12:827,36,0	1/1:7,16:23:51.18:1173,51,0	1/1:11,13:24:27.09:621,27,0	0/0:35,0:35:75.24:0,75,2541	0/0:20,0:20:48.13:0,48,1541	1/1:10,18:28:51.17:1143,51,0	0/0:30,0:30:72.25:0,72,2622	0/0:21,0:21:45.14:0,45,1577	1/1:9,14:23:33.07:710,33,0	1/1:4,5:9:12.04:276,12,0	1/1:16,5:21:15.05:320,15,0	1/1:8,15:23:45.15:1035,45,0	1/1:15,12:27:9.03:207,9,0	0/0:20,0:20:39.13:0,39,1393	0/0:17,0:17:30.10:0,30,1093	0/0:36,0:36:81.28:0,81,2965	1/1:7,11:18:24.08:552,24,0	1/1:11,14:25:45.13:988,45,0	1/1:10,16:25:51.17:1173,51,0	1/1:9,5:14:12.04:276,12,0
chr10	53691961	.	A	AC	357	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-4.252;DP=416;FS=4.010;HRun=6;HaplotypeScore=50.9578;InbreedingCoeff=0.9451;MQ=80.88;MQ0=0;MQRankSum=0.352;QD=21.00;ReadPosRankSum=-3.431;VQSLOD=2.2451;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:57.12:0,57,574	0/0:14,0:14:39.09:0,39,397	0/0:20,0:18:41.71:0,42,352	0/0:25,0:24:44.68:0,45,379	0/0:12,0:12:30.06:0,30,305	0/0:15,0:15:33.01:0,33,324	0/0:14,0:14:36.03:0,36,351	1/1:5,12:17:36.11:452,36,0	0/0:9,0:9:27.06:0,27,275	0/0:12,0:12:33.07:0,33,336	0/0:17,0:17:44.95:0,45,426	0/0:24,0:24:66.11:0,66,665	0/0:17,0:17:42.09:0,42,427	0/0:9,0:9:24.05:0,24,245	0/0:18,0:18:39.07:0,39,392	0/0:9,0:9:24.05:0,24,245	0/0:23,0:23:60.12:0,60,611	0/0:11,0:11:26.98:0,27,254	0/0:11,0:11:30.05:0,30,300	0/0:12,0:12:30.07:0,30,305	0/0:22,0:22:50.87:0,51,488	0/0:19,0:19:51.11:0,51,519	0/0:5,0:5:15.03:0,15,152	0/0:19,0:19:57.12:0,57,575	0/0:6,0:6:12.03:0,12,122	0/0:12,0:12:24.05:0,24,243	0/0:12,0:12:33.07:0,33,336	0/0:11,0:11:30.07:0,30,305
chr10	53693460	.	A	AAC	1876.31	PASS	AB=0.971;AC=28;AF=0.538;AN=52;BaseQRankSum=3.809;DP=690;FS=0.509;HRun=0;HaplotypeScore=145.6251;InbreedingCoeff=0.6785;MQ=57.06;MQ0=5;MQRankSum=-6.419;QD=4.73;ReadPosRankSum=-2.554;VQSLOD=2.8185;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:46:66.84:0,67,924	0/0:8,0:9:9.02:0,9,97	0/0:41,0:30:18.01:0,18,183	0/1:39,0:29:8.12:8,0,207	1/1:25,0:25:8.96:71,9,0	1/1:24,0:22:2.99:23,3,0	1/1:14,0:15:2.94:25,3,0	1/1:30,0:27:13.54:90,14,0	1/1:25,0:23:15.82:103,16,0	1/1:18,0:29:35.84:329,36,0	./.	0/1:31,2:33:36.10:36,0,567	0/0:29,0:29:66.18:0,66,758	1/1:31,0:27:5.76:51,6,0	1/1:10,20:32:23.61:680,24,0	0/0:21,0:26:62.85:0,63,693	0/0:14,0:19:16.96:0,17,84	0/0:8,0:8:2.84:0,3,14	1/1:13,0:12:18.53:173,19,0	./.	1/1:18,0:18:5.98:48,6,0	0/0:20,0:22:44.76:0,45,467	0/0:18,0:18:32.96:0,33,365	0/0:32,0:32:43.04:0,43,658	1/1:22,0:25:8.93:66,9,0	1/1:24,0:24:35.83:290,36,0	1/1:29,0:27:8.40:76,8,0	0/0:7,0:7:2.90:0,3,7
chr10	53693481	.	ACAC	A	40.48	PASS	AB=0.769;AC=4;AF=0.074;AN=54;BaseQRankSum=4.129;DP=663;FS=1.450;HRun=0;HaplotypeScore=127.3478;InbreedingCoeff=0.3220;MQ=44.14;MQ0=25;MQRankSum=-3.772;QD=0.94;ReadPosRankSum=0.643;VQSLOD=2.5338;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,111,2268	0/0:6,0:6:15.05:0,15,338	0/0:33,0:11:29.86:0,30,525	0/0:47,0:19:52.26:0,52,973	0/0:26,0:25:15.05:0,15,252	0/0:20,0:18:6:0,6,85	0/0:14,0:14:8.73:0,9,121	0/0:32,0:27:63.17:0,63,980	0/0:22,0:19:15.51:0,16,240	0/0:19,0:19:42.41:0,42,902	./.	0/0:32,0:31:88.85:0,89,1828	0/0:33,0:33:93.32:0,93,1998	0/0:30,0:26:5.71:0,6,79	0/0:36,0:35:78.27:0,78,1327	0/0:35,0:35:95.87:0,96,1880	0/1:13,6:19:0.92:105,0,1	0/1:5,2:7:22.66:23,0,57	0/0:17,0:15:42.14:0,42,773	1/1:17,0:17:0.89:2,1,0	0/0:18,0:17:8.90:0,9,188	0/0:24,0:24:62.77:0,63,1228	0/0:23,0:22:60.20:0,60,1205	0/0:34,0:30:81.06:0,81,1710	0/0:21,0:20:8.54:0,9,186	0/0:23,0:21:60.20:0,60,1060	0/0:19,0:17:14.84:0,15,292	0/0:6,0:5:12.04:0,12,234
chr10	53693486	.	C	CAG	190.14	PASS	AB=0.890;AC=6;AF=0.130;AN=46;BaseQRankSum=6.640;DP=638;FS=15.278;HRun=0;HaplotypeScore=136.5408;InbreedingCoeff=0.0590;MQ=42.86;MQ0=26;MQRankSum=-5.365;QD=2.14;ReadPosRankSum=-1.337;VQSLOD=1.6566;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:44:93.07:0,93,1070	0/0:4,0:5:6.01:0,6,61	0/0:26,0:9:7.08:0,7,76	0/0:39,0:10:6.02:0,6,73	./.	./.	0/0:12,0:12:3.89:0,4,33	0/0:31,0:26:12.67:0,13,166	0/0:18,0:15:2.04:0,2,6	0/0:20,0:20:20.92:0,21,214	./.	0/0:30,0:30:57.38:0,57,692	0/0:34,0:34:69.01:0,69,814	0/0:30,0:25:3.01:0,3,33	0/0:34,0:33:68.85:0,69,673	0/0:36,0:37:75.06:0,75,887	0/1:13,6:19:12.80:198,0,13	0/1:6,2:8:27.17:68,0,27	0/0:15,0:13:17.16:0,17,139	1/1:20,0:19:0.47:1,0,0	./.	0/0:22,0:22:31.13:0,31,445	0/0:24,0:23:29.15:0,29,513	0/0:30,0:29:59.68:0,60,659	./.	0/1:22,0:20:10.55:11,0,62	0/1:20,0:18:5.15:13,0,5	0/0:6,0:5:3.01:0,3,32
chr10	53693491	.	A	ACACAC	318.11	PASS	AB=0.936;AC=10;AF=0.192;AN=52;BaseQRankSum=5.918;DP=565;FS=50.211;HRun=0;HaplotypeScore=124.0707;InbreedingCoeff=0.3461;MQ=43.11;MQ0=26;MQRankSum=-2.449;QD=2.82;ReadPosRankSum=-1.061;VQSLOD=0.4890;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,108,2483	0/0:6,0:6:15.01:0,15,255	0/0:23,0:7:18.04:0,18,285	0/0:34,0:6:12.04:0,12,279	./.	1/1:15,0:13:2.99:24,3,0	0/0:8,0:8:2.97:0,3,47	0/0:23,0:19:47.73:0,48,898	1/1:13,0:10:5.25:51,5,0	0/1:19,0:20:88.47:88,0,607	./.	0/0:29,0:28:79.49:0,79,1669	0/0:30,0:30:84.27:0,84,1873	0/0:20,1:17:3.01:0,3,70	0/0:33,0:32:72.23:0,72,1632	0/0:38,0:38:99:0,105,2270	0/0:19,0:19:27.04:0,27,344	0/0:8,0:8:14.07:0,14,218	0/0:10,0:9:21.06:0,21,387	0/0:13,4:16:2.92:0,3,8	0/1:10,0:9:0:0,0,0	0/0:23,0:23:57.20:0,57,1297	0/0:22,0:21:54.17:0,54,1185	0/0:32,0:28:72.23:0,72,1544	1/1:19,0:17:3.47:26,3,0	0/1:13,1:14:99:148,0,387	0/1:18,1:17:40.35:109,0,40	0/0:4,0:3:6.02:0,6,138
chr10	53693504	.	C	CAGAG	1973.32	PASS	AB=0.941;AC=18;AF=0.375;AN=48;BaseQRankSum=7.752;DP=555;FS=10.936;HRun=0;HaplotypeScore=112.0643;InbreedingCoeff=0.6853;MQ=42.65;MQ0=28;MQRankSum=-11.028;QD=11.96;ReadPosRankSum=-4.365;VQSLOD=1.0384;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,117,1842	0/0:6,0:5:12.04:0,12,207	0/0:18,0:4:8.77:0,9,117	0/0:26,0:2:6.02:0,6,110	./.	0/1:13,1:12:0:0,0,0	1/1:4,2:6:3.01:37,3,0	0/1:35,0:30:89.66:90,0,175	0/0:8,3:8:0.98:0,1,2	1/1:21,2:22:48.25:882,48,0	./.	0/0:29,0:28:79.06:0,79,1270	0/0:30,0:30:81.16:0,81,1363	1/1:14,6:16:2.94:18,3,0	0/0:36,0:35:78.16:0,78,1235	0/0:33,0:32:90.27:0,90,1564	0/0:15,0:15:20.78:0,21,213	0/0:8,0:8:8.01:0,8,145	1/1:7,0:7:17.21:193,17,0	1/1:15,1:15:3.01:54,3,0	./.	0/0:22,0:22:54.16:0,54,897	0/0:21,0:19:45.15:0,45,802	0/0:32,0:28:69.16:0,69,1098	./.	1/1:14,4:16:33.94:680,34,0	1/1:14,6:18:14.45:147,14,0	1/1:3,1:3:3.90:40,4,0
chr10	53693508	.	GAC	G	596.79	PASS	AB=0.883;AC=16;AF=0.320;AN=50;BaseQRankSum=7.991;DP=569;FS=12.007;HRun=0;HaplotypeScore=101.2034;InbreedingCoeff=0.4058;MQ=42.85;MQ0=25;MQRankSum=-8.245;QD=3.57;ReadPosRankSum=-1.330;VQSLOD=1.3438;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,109,2039	0/0:7,0:6:14.98:0,15,249	0/0:16,0:4:8.39:0,8,114	0/0:23,0:2:6.02:0,6,116	./.	0/1:14,2:14:0:0,0,0	1/1:3,3:6:2.55:19,3,0	0/1:36,6:35:99:257,0,444	1/1:11,2:9:2.70:16,3,0	0/1:16,7:22:70.70:232,0,71	0/0:10,3:11:0:0,0,0	0/0:31,0:30:79.84:0,80,1367	0/0:30,0:30:84.17:0,84,1400	1/1:15,4:15:2.94:18,3,0	0/0:35,0:35:81.15:0,81,1342	0/0:35,0:34:99:0,99,1686	0/0:15,0:15:20.99:0,21,344	0/0:8,0:8:15:0,15,249	0/1:9,0:9:39.63:40,0,63	1/1:13,3:15:2.80:13,3,0	./.	0/0:21,0:21:57.16:0,57,1004	0/0:22,0:20:51.05:0,51,898	0/0:35,0:31:78.13:0,78,1200	./.	1/1:15,3:17:1.68:124,2,0	0/0:15,5:18:9.78:0,10,61	1/1:4,0:3:2.65:18,3,0
chr10	53693518	.	GAC	G	314.46	PASS	AB=0.859;AC=8;AF=0.174;AN=46;BaseQRankSum=8.126;DP=553;FS=12.529;HRun=0;HaplotypeScore=99.9076;InbreedingCoeff=0.2262;MQ=43.34;MQ0=21;MQRankSum=-8.183;QD=2.58;ReadPosRankSum=-2.366;VQSLOD=0.9806;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,112,2100	0/0:8,0:7:18.04:0,18,310	0/0:10,0:4:8.04:0,8,42	0/0:15,0:2:6.02:0,6,106	./.	0/1:11,2:11:0:0,0,0	0/0:4,3:5:0:0,0,0	0/0:42,0:36:9.11:0,9,828	0/1:11,2:9:0.20:0,0,0	0/1:17,7:23:69.70:217,0,70	0/0:10,3:11:0:0,0,0	0/0:29,0:28:69.28:0,69,1360	0/0:29,0:29:72.17:0,72,1389	./.	0/0:31,0:30:66.15:0,66,1205	0/0:37,0:36:99:0,108,1765	0/0:14,0:14:19.61:0,20,335	0/0:7,0:7:15.05:0,15,265	0/1:16,0:16:34.79:60,0,35	1/1:16,3:18:1.25:3,1,0	./.	0/0:23,0:23:57.01:0,57,916	0/0:28,0:26:61.39:0,61,1030	0/0:30,0:26:66.21:0,66,1216	./.	0/1:15,3:16:8.20:128,0,8	0/1:14,5:17:6.84:7,0,28	./.
chr10	53693520	.	C	CAG	1631.28	PASS	AB=0.772;AC=15;AF=0.326;AN=46;BaseQRankSum=7.016;DP=576;FS=8.587;HRun=0;HaplotypeScore=113.2623;InbreedingCoeff=0.6785;MQ=42.89;MQ0=20;MQRankSum=-10.221;QD=11.25;ReadPosRankSum=-4.013;VQSLOD=1.7833;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,113,1452	0/0:8,0:7:18.06:0,18,238	0/0:8,0:4:2.88:0,3,15	0/0:14,0:2:3.01:0,3,39	./.	./.	./.	0/0:44,0:38:64.57:0,65,906	1/1:9,5:10:3.58:10,4,0	0/1:20,6:25:4.47:539,0,4	0/1:7,6:11:0:0,0,0	0/0:29,0:28:67.99:0,68,922	0/0:29,0:29:77.89:0,78,965	./.	0/0:33,0:32:57.20:0,57,824	0/0:37,0:36:90.30:0,90,1193	0/0:13,0:13:19.44:0,19,230	0/0:7,0:7:15.05:0,15,192	1/1:7,11:18:17.03:450,17,0	1/1:16,5:20:3.01:35,3,0	0/1:7,2:7:0:0,0,0	0/0:22,0:22:45.15:0,45,591	0/0:27,0:25:58.07:0,58,756	0/0:31,0:27:66.20:0,66,860	./.	1/1:13,7:18:38.46:480,38,0	1/1:14,7:19:8.48:214,8,0	1/1:1,2:2:3.01:52,3,0
chr10	53693538	.	CAG	C	502.78	PASS	AB=0.935;AC=14;AF=0.280;AN=50;BaseQRankSum=9.450;DP=548;FS=8.754;HRun=0;HaplotypeScore=118.5583;InbreedingCoeff=0.2965;MQ=42.75;MQ0=13;MQRankSum=-10.095;QD=2.50;ReadPosRankSum=-2.132;VQSLOD=0.8967;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:81.51:0,82,1264	0/0:10,0:9:27.09:0,27,429	./.	./.	0/0:28,0:24:2.74:0,3,12	0/1:18,0:15:0:1,0,0	0/1:16,0:13:0:0,0,0	0/1:46,6:45:99:197,0,234	0/0:14,0:12:6.08:0,6,70	0/1:24,0:22:56.43:94,0,56	0/0:13,0:11:0:0,0,0	0/0:29,0:28:75.22:0,75,1177	0/0:26,1:27:66.22:0,66,1055	0/0:16,0:14:2.74:0,3,12	0/0:28,1:28:66.22:0,66,1061	0/0:34,0:33:92.31:0,92,1415	1/1:5,6:11:14.84:133,15,0	0/1:2,5:7:4.56:73,0,5	0/1:15,0:14:13.82:14,0,16	./.	0/0:6,0:5:0:0,0,0	0/0:20,0:19:51.16:0,51,811	0/0:32,0:30:54.17:0,54,863	0/0:31,0:27:60.19:0,60,951	0/1:18,0:13:0:0,0,0	0/1:15,0:14:28.51:29,0,40	1/1:22,0:20:5.46:73,5,0	1/1:3,0:2:2.99:23,3,0
chr10	53693544	.	G	GAGAC	1473.49	PASS	AB=0.969;AC=20;AF=0.455;AN=44;BaseQRankSum=10.653;DP=537;FS=0.579;HRun=0;HaplotypeScore=137.2393;InbreedingCoeff=0.6149;MQ=43.49;MQ0=13;MQRankSum=-8.945;QD=8.28;ReadPosRankSum=-1.817;VQSLOD=2.6213;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:88.49:0,88,1494	0/0:12,0:11:33.08:0,33,530	./.	./.	1/1:21,7:24:5.94:42,6,0	1/1:17,3:17:3.01:36,3,0	1/1:15,0:12:0.47:1,0,0	0/0:53,0:46:99:0,108,861	0/1:12,2:12:0.75:84,0,1	1/1:22,1:21:14.38:488,14,0	./.	0/0:28,0:27:78.23:0,78,1380	0/0:25,0:25:72.21:0,72,1255	./.	0/0:30,0:29:75.21:0,75,1302	0/0:35,0:34:99:0,102,1698	0/1:13,0:13:28.33:33,0,28	0/1:8,0:8:46.42:57,0,46	1/1:9,1:9:17.98:229,18,0	./.	0/1:6,0:4:0:0,0,0	0/0:20,0:19:51.16:0,51,926	0/0:29,0:27:57.18:0,57,1043	0/0:31,0:27:69.07:0,69,1149	./.	1/1:16,1:16:28.10:356,28,0	1/1:21,0:19:28.06:279,28,0	1/1:3,0:2:3.01:30,3,0
chr10	53693546	.	G	GAC	299.06	PASS	AB=0.956;AC=16;AF=0.320;AN=50;BaseQRankSum=10.027;DP=533;FS=4.745;HRun=0;HaplotypeScore=126.8469;InbreedingCoeff=0.2913;MQ=43.82;MQ0=15;MQRankSum=-9.640;QD=1.80;ReadPosRankSum=-1.704;VQSLOD=1.8935;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:89.03:0,89,1237	0/0:12,0:11:33.08:0,33,461	./.	./.	0/1:24,2:22:1.67:2,0,4	0/1:14,3:15:10.02:10,0,32	0/0:14,2:13:2.65:0,3,20	0/0:54,0:46:85.77:0,86,853	0/1:11,2:11:16.54:34,0,17	0/1:23,0:21:30.99:145,0,31	0/1:9,0:8:0:0,0,0	0/0:28,0:27:78.22:0,78,1128	0/0:25,0:25:72.18:0,72,1054	1/1:13,2:14:2.04:6,2,0	0/0:31,0:30:75.21:0,75,1070	0/0:35,0:34:99:0,102,1416	0/0:14,0:13:15.96:0,16,94	0/1:8,0:8:3.43:3,0,73	1/1:9,0:8:16.69:96,17,0	./.	0/1:6,0:4:0:0,0,0	0/0:22,0:21:54.16:0,54,780	0/0:28,0:26:57.17:0,57,847	0/0:31,0:27:69.16:0,69,964	0/0:15,4:14:2.97:0,3,20	0/1:17,0:16:15.91:95,0,16	1/1:20,0:19:3.54:35,4,0	1/1:3,0:2:2.37:8,2,0
chr10	53693550	.	GAGAC	G	1551.15	PASS	AB=0.925;AC=19;AF=0.365;AN=52;BaseQRankSum=10.584;DP=518;FS=5.227;HRun=0;HaplotypeScore=126.8724;InbreedingCoeff=0.2920;MQ=45.30;MQ0=15;MQRankSum=-8.329;QD=7.87;ReadPosRankSum=-2.109;VQSLOD=2.3217;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:51.39:0,51,1946	0/0:13,0:12:36.08:0,36,779	1/1:1,0:1:2.04:6,2,0	./.	0/1:17,5:18:9.87:17,0,10	0/1:14,3:15:24.29:24,0,30	0/0:8,7:12:2.73:0,3,22	0/1:48,0:42:3.29:3,0,374	0/1:10,3:11:50.20:50,0,52	1/1:25,0:23:47.41:579,47,0	1/1:9,1:9:2.77:21,3,0	0/0:29,0:28:81.25:0,81,1874	0/0:28,0:28:80.74:0,81,1619	0/0:12,1:12:2.94:0,3,18	0/0:32,0:31:84.20:0,84,1794	0/0:37,0:36:99:0,99,2149	0/1:14,0:13:53.13:77,0,53	0/1:8,0:8:27.04:81,0,27	0/1:4,0:3:5.99:98,0,6	./.	0/0:6,0:5:0:0,0,0	0/0:24,0:23:60.14:0,60,1340	0/0:26,0:24:60.19:0,60,1392	0/0:30,0:26:60.15:0,60,1383	0/0:14,4:13:5.25:0,5,39	1/1:14,1:15:19.15:334,19,0	1/1:16,1:16:29.91:395,30,0	1/1:2,1:2:3:28,3,0
chr10	53693552	.	GAC	G	934.68	PASS	AB=0.874;AC=15;AF=0.288;AN=52;BaseQRankSum=10.307;DP=504;FS=6.246;HRun=0;HaplotypeScore=111.8293;InbreedingCoeff=0.2332;MQ=45.70;MQ0=17;MQRankSum=-9.339;QD=6.23;ReadPosRankSum=-1.783;VQSLOD=2.3687;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:50.92:0,51,1446	0/0:13,0:12:36.08:0,36,590	1/1:4,0:1:2.04:6,2,0	./.	0/0:20,2:18:6.79:0,7,25	0/0:17,0:15:1.39:0,1,32	0/0:13,1:11:2.74:0,3,22	0/1:44,0:37:70.19:70,0,354	0/1:13,0:12:1.82:2,0,98	1/1:11,11:20:11.43:407,11,0	0/1:6,4:9:11.09:37,0,11	0/0:30,0:29:84.22:0,84,1457	0/0:28,0:28:80.73:0,81,1268	0/0:12,0:11:2.74:0,3,12	0/0:32,0:31:84.20:0,84,1396	0/0:37,0:36:99:0,105,1765	0/1:13,0:12:34.34:34,0,46	0/1:8,0:8:29.97:30,0,52	0/1:2,2:3:27.40:53,0,27	./.	0/0:3,1:3:0:0,0,0	0/0:23,0:22:60.14:0,60,1021	0/0:26,0:24:60.05:0,60,1041	0/0:28,0:24:60.15:0,60,1044	0/0:18,0:13:5.29:0,5,39	0/1:9,5:14:1.41:160,0,1	1/1:5,10:15:24.47:243,24,0	1/1:2,1:2:3.01:42,3,0
chr10	53693556	.	GAGAGAC	G	749.72	PASS	AB=0.954;AC=23;AF=0.426;AN=54;BaseQRankSum=11.459;DP=509;FS=0.000;HRun=0;HaplotypeScore=141.5818;InbreedingCoeff=0.4767;MQ=45.92;MQ0=20;MQRankSum=-6.792;QD=4.19;ReadPosRankSum=-1.382;VQSLOD=1.6571;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:86.27:0,86,2601	0/0:13,0:12:36.12:0,36,1159	0/0:4,0:1:3.01:0,3,34	./.	0/1:19,2:17:9.19:33,0,9	1/1:13,3:14:6.11:44,6,0	1/1:11,2:10:0.89:2,1,0	0/0:45,0:39:70.32:0,70,1116	1/1:11,2:12:0.07:122,0,0	1/1:21,0:19:41.29:277,41,0	0/1:10,0:9:11.07:38,0,11	0/0:29,0:28:84:0,84,2420	0/0:29,0:29:84.25:0,84,2211	0/1:10,2:11:12:21,0,12	0/0:32,0:31:84.29:0,84,2395	0/0:36,0:35:99:0,99,2843	0/0:13,0:12:2.22:0,2,150	0/1:8,0:8:23.10:23,0,93	1/1:4,0:3:8.81:55,9,0	0/1:12,0:12:0:0,0,0	0/0:4,0:3:0:0,0,0	0/0:25,0:24:66.22:0,66,1874	0/0:28,0:25:57.19:0,57,1729	0/0:27,0:23:51.17:0,51,1640	1/1:14,4:13:4.82:34,5,0	1/1:13,0:13:17.70:116,18,0	1/1:14,0:14:25.81:137,26,0	1/1:4,0:3:2.94:18,3,0
chr10	53693560	.	GAC	G	1023.75	PASS	AB=0.801;AC=17;AF=0.304;AN=56;BaseQRankSum=10.278;DP=518;FS=4.252;HRun=0;HaplotypeScore=106.0650;InbreedingCoeff=0.4762;MQ=46.26;MQ0=22;MQRankSum=-8.313;QD=8.90;ReadPosRankSum=-2.118;VQSLOD=2.5747;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:87.18:0,87,1531	0/0:15,0:14:42.11:0,42,741	0/0:7,0:1:3.01:0,3,48	0/0:17,0:2:2.98:0,3,22	0/0:22,0:18:6.88:0,7,28	0/0:19,0:17:1.63:0,2,35	0/0:14,0:11:2.74:0,3,23	0/0:46,0:40:6.68:0,7,1012	0/1:13,0:12:1.82:2,0,92	1/1:13,7:18:18.32:367,18,0	0/1:7,3:9:9.09:35,0,9	0/0:29,0:28:83.67:0,84,1465	0/0:28,0:28:83.29:0,83,1417	0/0:10,1:10:5.65:0,6,28	0/0:31,0:30:84.29:0,84,1591	0/0:35,0:34:99:0,99,1766	1/1:7,4:10:10.80:107,11,0	0/1:7,2:9:9.40:86,0,9	0/1:2,2:4:8.76:77,0,9	0/1:8,4:12:0:0,0,0	1/1:4,1:5:2.78:21,3,0	0/0:25,0:24:66.21:0,66,1220	0/0:28,0:25:57.18:0,57,1047	0/0:25,0:21:54.15:0,54,974	0/0:18,0:13:5.31:0,5,42	1/1:9,5:14:14.67:180,15,0	1/1:7,7:14:27.41:249,27,0	1/1:3,0:2:6.01:68,6,0
chr10	53693562	.	C	CAG	1515.18	PASS	AB=1.000;AC=25;AF=0.446;AN=56;BaseQRankSum=11.204;DP=527;FS=4.222;HRun=0;HaplotypeScore=109.6996;InbreedingCoeff=0.6854;MQ=46.50;MQ0=23;MQRankSum=-5.802;QD=8.37;ReadPosRankSum=-3.012;VQSLOD=2.7350;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:77.54:0,78,1070	0/0:15,0:14:42.12:0,42,542	0/0:8,0:2:3:0,3,40	0/0:20,0:2:2.99:0,3,38	1/1:11,11:18:7.75:106,8,0	1/1:6,13:18:9:156,9,0	1/1:12,3:12:5.99:75,6,0	0/0:48,0:42:70.90:0,71,838	1/1:5,9:13:21.65:319,22,0	1/1:19,0:17:27.30:299,27,0	0/1:11,0:10:8.54:63,0,9	0/0:31,0:30:74.04:0,74,948	0/0:28,0:28:71.26:0,71,922	1/1:4,7:10:5.05:58,5,0	0/0:30,0:29:78.24:0,78,1021	0/0:34,0:33:84.28:0,84,1117	0/0:11,0:10:12.03:0,12,49	0/0:8,0:8:8.52:0,9,42	0/1:5,0:4:3.04:21,0,3	0/1:12,0:12:0:0,0,0	1/1:4,0:4:2.98:21,3,0	0/0:25,0:24:63.18:0,63,807	0/0:26,0:23:54.17:0,54,700	0/0:27,0:23:51.05:0,51,677	1/1:10,8:13:5.98:104,6,0	1/1:14,0:14:13.65:222,14,0	1/1:13,0:13:25.90:241,26,0	1/1:3,0:2:2.99:23,3,0
chr10	53693568	.	GAC	G	229.63	PASS	AB=0.933;AC=5;AF=0.089;AN=56;BaseQRankSum=5.341;DP=542;FS=11.948;HRun=0;HaplotypeScore=114.2226;InbreedingCoeff=0.5695;MQ=47.82;MQ0=20;MQRankSum=-3.629;QD=6.96;ReadPosRankSum=-2.523;VQSLOD=2.0319;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:84.27:0,84,1521	0/0:17,0:17:51.14:0,51,892	0/1:13,0:6:5.59:6,0,56	0/0:29,0:4:9:0,9,115	0/0:23,0:19:11.58:0,12,95	0/0:21,0:19:11.57:0,12,106	0/0:16,0:13:8.75:0,9,79	0/0:45,0:39:98.45:0,98,1542	0/0:14,0:13:20.41:0,20,166	0/0:20,0:18:21.07:0,21,225	0/0:11,0:10:15.02:0,15,204	0/0:27,0:27:65.27:0,65,1414	0/0:27,0:27:77.26:0,77,1371	0/0:11,1:11:8.74:0,9,65	0/0:30,0:29:78.20:0,78,1369	0/0:31,0:30:87.26:0,87,1599	1/1:5,6:10:15.06:196,15,0	1/1:2,6:8:12.29:144,12,0	0/0:8,0:7:20.11:0,20,161	0/0:14,0:14:9:0,9,88	0/0:6,0:6:8.94:0,9,68	0/0:25,0:24:66.19:0,66,1173	0/0:25,0:23:57.16:0,57,978	0/0:26,0:23:57.14:0,57,987	0/0:18,0:13:5.36:0,5,57	0/0:17,0:17:42.92:0,43,330	0/0:14,0:14:12.97:0,13,84	0/0:3,0:2:0.34:0,0,20
chr10	53693580	.	CAG	C	241.89	PASS	AB=0.906;AC=12;AF=0.214;AN=56;BaseQRankSum=8.994;DP=597;FS=3.719;HRun=0;HaplotypeScore=125.0122;InbreedingCoeff=0.1935;MQ=52.88;MQ0=16;MQRankSum=1.192;QD=1.53;ReadPosRankSum=-2.307;VQSLOD=1.7916;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,1:32:24.85:0,25,904	0/0:17,0:17:42.14:0,42,678	0/0:30,0:17:28.53:0,29,470	0/0:45,0:10:20.94:0,21,279	0/0:21,3:20:1.57:0,2,11	0/0:20,3:21:0.24:0,0,11	1/1:19,2:18:4.96:14,5,0	0/0:46,0:40:87.06:0,87,1283	0/0:16,1:16:8.31:0,8,43	0/1:17,4:19:5.65:133,0,6	1/1:11,1:11:2.72:8,3,0	0/0:26,1:27:28.37:0,28,977	0/0:27,0:27:66.23:0,66,1084	0/1:15,1:15:0.51:1,0,8	0/0:27,0:26:72.23:0,72,1150	0/0:28,0:28:69.24:0,69,1142	0/0:12,0:11:22.58:0,23,227	0/1:9,1:10:20.83:21,0,102	0/1:10,3:12:18.77:91,0,19	0/1:14,1:15:0.36:0,0,1	0/0:6,1:7:2.95:0,3,9	0/0:21,0:21:51.15:0,51,781	0/0:27,0:26:66.23:0,66,1068	0/0:23,0:22:54.18:0,54,866	0/1:17,1:13:1.19:1,0,2	0/1:16,3:19:38.56:92,0,39	0/1:13,0:13:5.19:5,0,42	0/0:6,0:6:7.30:0,7,19
chr10	53693827	.	G	GCA	647.28	PASS	AB=0.754;AC=3;AF=0.054;AN=56;BaseQRankSum=5.190;DP=625;FS=1.888;HRun=0;HaplotypeScore=99.6614;InbreedingCoeff=-0.0515;MQ=57.26;MQ0=9;MQRankSum=-0.821;QD=8.75;ReadPosRankSum=2.940;VQSLOD=3.1482;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:35:98.78:0,99,1341	0/0:9,0:9:22.23:0,22,256	0/0:7,0:5:7.01:0,7,25	0/0:6,0:3:8.91:0,9,77	0/0:30,0:27:17.38:0,17,232	0/0:23,0:22:23.06:0,23,219	0/0:34,0:34:38.74:0,39,542	0/0:18,0:18:45.03:0,45,592	0/1:17,0:17:8.08:8,0,124	0/0:29,0:29:75:0,75,863	0/0:11,0:11:17.83:0,18,245	0/0:21,0:21:44.71:0,45,644	0/0:17,0:17:51.07:0,51,659	0/0:14,0:14:14.09:0,14,156	0/0:31,0:30:87.06:0,87,1081	0/0:19,0:19:48.06:0,48,636	0/1:16,18:36:68.75:487,0,69	0/1:8,13:21:18.36:247,0,18	0/0:9,0:9:27.09:0,27,390	0/0:20,0:20:45.51:0,46,623	0/0:58,0:57:99:0,156,2061	0/0:22,0:22:63.32:0,63,825	0/0:28,0:28:69.01:0,69,855	0/0:41,0:41:99:0,102,1441	0/0:15,0:15:13.23:0,13,159	0/0:23,0:23:57.08:0,57,816	0/0:13,0:13:38.28:0,38,435	0/0:16,0:16:42.01:0,42,495
chr10	53693829	.	G	GCA	1958.73	PASS	AB=0.684;AC=10;AF=0.192;AN=52;BaseQRankSum=-3.405;DP=632;FS=19.573;HRun=0;HaplotypeScore=100.0311;InbreedingCoeff=0.0282;MQ=57.00;MQ0=9;MQRankSum=1.104;QD=9.89;ReadPosRankSum=2.013;VQSLOD=2.0603;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:37:37.24:0,37,417	0/1:6,1:8:28.23:28,0,118	./.	./.	0/1:12,16:26:27.98:40,0,28	0/1:6,18:23:40.92:295,0,41	0/1:14,18:32:99:240,0,130	0/0:20,0:20:14.98:0,15,140	0/1:3,12:17:18.44:335,0,18	0/0:25,0:27:47.51:0,48,392	0/0:13,0:13:17.82:0,18,175	0/0:21,0:23:47.32:0,47,466	0/0:15,0:16:38.29:0,38,345	0/1:4,11:16:7.82:169,0,8	0/0:31,0:32:56.74:0,57,509	0/0:18,0:18:38.75:0,39,348	0/1:37,0:37:22.09:525,0,22	1/1:22,0:22:22.30:302,22,0	0/0:7,0:9:14.71:0,15,130	0/0:18,0:20:30.13:0,30,273	0/0:55,0:58:99:0,113,1080	0/0:21,0:22:5.18:0,5,416	0/0:26,0:26:38.98:0,39,383	0/0:38,0:41:83.65:0,84,849	0/1:4,8:13:17.21:169,0,17	0/0:21,0:21:44.93:0,45,471	0/0:12,0:14:29.41:0,29,240	0/0:13,0:17:29.46:0,29,217
chr10	53694004	.	CGT	C	203.69	PASS	AB=0.924;AC=8;AF=0.143;AN=56;BaseQRankSum=1.673;DP=588;FS=7.068;HRun=0;HaplotypeScore=106.3637;InbreedingCoeff=0.1308;MQ=60.98;MQ0=7;MQRankSum=3.349;QD=1.39;ReadPosRankSum=0.560;VQSLOD=0.7616;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:26:36.08:0,36,484	0/0:10,0:10:15.05:0,15,225	0/0:30,0:18:6.02:0,6,89	0/0:20,0:15:12.01:0,12,153	0/0:33,0:31:17.94:0,18,156	0/0:34,0:31:11.98:0,12,98	0/0:28,0:25:11.98:0,12,113	1/1:18,7:25:23.80:217,24,0	0/0:20,0:18:9.02:0,9,111	0/0:28,0:27:50.94:0,51,541	0/1:15,0:14:0:0,0,0	0/1:19,2:21:3.45:3,0,355	0/1:15,0:15:18.58:19,0,95	0/0:13,0:13:3.01:0,3,42	0/1:24,4:28:24.89:25,0,504	0/1:18,3:21:33.97:34,0,311	0/0:22,0:20:3:0,3,23	0/0:15,0:14:11.46:0,11,118	0/0:24,0:24:23.55:0,24,239	0/0:14,0:14:8.63:0,9,69	0/0:20,0:18:12:0,12,116	0/1:19,3:22:33.94:34,0,356	0/0:14,0:14:18.06:0,18,265	0/0:21,0:21:33.11:0,33,499	0/0:19,0:19:11.99:0,12,103	0/0:19,0:19:23.85:0,24,197	0/0:8,0:17:8.24:0,8,60	0/0:8,0:14:5.97:0,6,47
chr10	53694117	.	TA	T	14356.19	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=13.532;DP=665;FS=0.287;HRun=1;HaplotypeScore=74.6056;InbreedingCoeff=0.9999;MQ=89.32;MQ0=0;MQRankSum=-5.706;QD=37.00;ReadPosRankSum=2.272;VQSLOD=5.3539;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:81.28:0,81,1295	0/0:10,0:10:30.08:0,30,454	0/0:25,0:25:72.13:0,72,1037	0/0:26,0:26:68.82:0,69,1075	1/1:0,28:28:81.27:1132,81,0	1/1:0,21:21:51.17:707,51,0	1/1:0,21:21:60.20:838,60,0	1/1:39,0:39:54.27:495,54,0	1/1:0,26:26:78.26:1083,78,0	1/1:0,33:33:99:1367,99,0	1/1:0,26:26:78.26:1091,78,0	0/0:21,0:21:63.21:0,63,1005	0/0:26,0:26:78.27:0,78,1247	1/1:0,15:15:39.13:545,39,0	0/0:34,0:34:99:0,102,1604	0/0:26,1:27:39.31:0,39,1205	1/1:0,22:22:60.20:839,60,0	1/1:0,21:21:57.19:792,57,0	1/1:0,25:25:75.25:1049,75,0	1/1:0,22:22:60.20:839,60,0	1/1:0,27:27:75.25:1049,75,0	0/0:30,0:30:87.30:0,87,1371	0/0:28,0:28:84.29:0,84,1343	0/0:21,0:21:60.19:0,60,936	1/1:1,12:13:39.12:529,39,0	1/1:0,22:22:66.22:911,66,0	1/1:0,15:15:42.01:587,42,0	1/1:0,12:12:36.12:503,36,0
chr10	53694118	.	AG	A	7152.69	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=17.643;DP=670;FS=0.000;HRun=1;HaplotypeScore=100.9072;InbreedingCoeff=0.9996;MQ=89.09;MQ0=0;MQRankSum=-4.806;QD=18.29;ReadPosRankSum=2.431;VQSLOD=5.1159;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:81.28:0,81,1293	0/0:11,0:11:33.10:0,33,498	0/0:25,0:25:72.06:0,72,1052	0/0:26,0:26:70.98:0,71,1031	1/1:28,0:28:79.47:508,79,0	1/1:21,0:21:49.97:312,50,0	1/1:21,0:21:59:392,59,0	1/1:0,37:37:99:1535,111,0	1/1:26,0:26:76.46:489,76,0	1/1:33,0:33:90.76:480,91,0	1/1:27,0:27:56.07:418,56,0	0/0:21,0:21:63.21:0,63,1007	0/0:26,0:26:78.27:0,78,1247	1/1:15,0:15:38.24:242,38,0	0/0:34,0:34:99:0,102,1627	0/0:28,0:28:67.21:0,67,1255	1/1:22,0:22:58.81:365,59,0	1/1:21,0:21:55.92:352,56,0	1/1:26,0:26:47.45:338,47,0	1/1:23,0:23:36.65:325,37,0	1/1:27,0:27:73.12:428,73,0	0/0:30,0:30:87.28:0,87,1368	0/0:28,0:28:84.29:0,84,1343	0/0:21,0:21:60.20:0,60,950	1/1:13,0:13:35.50:202,35,0	1/1:22,0:22:62.19:313,62,0	1/1:17,0:17:24.10:230,24,0	1/1:12,0:12:35.34:223,35,0
chr10	53694341	.	CAA	C	1018.01	PASS	AB=0.907;AC=6;AF=0.107;AN=56;BaseQRankSum=6.645;DP=606;FS=8.368;HRun=11;HaplotypeScore=101.9983;InbreedingCoeff=0.7106;MQ=65.78;MQ0=3;MQRankSum=-1.339;QD=9.88;ReadPosRankSum=2.131;VQSLOD=1.5914;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:40:93.32:0,93,1426	0/0:10,0:10:24.08:0,24,367	0/1:31,0:23:4.19:4,0,267	0/1:22,0:16:1.16:1,0,234	0/0:22,1:23:31.69:0,32,889	0/0:17,0:17:39.11:0,39,559	0/0:29,0:29:75.25:0,75,1128	0/0:15,0:14:20.98:0,21,223	0/0:19,0:19:51.17:0,51,779	0/0:25,0:25:51.15:0,51,734	0/0:23,0:23:66.09:0,66,922	0/0:13,0:13:33.11:0,33,506	0/0:17,0:17:48.16:0,48,736	0/0:23,0:23:57.18:0,57,855	0/0:33,0:33:81.26:0,81,1218	0/0:17,0:21:47.64:0,48,664	1/1:2,23:25:63.14:671,63,0	1/1:3,16:18:35.64:467,36,0	0/0:26,0:27:66.20:0,66,937	0/0:21,0:21:54.18:0,54,827	0/0:15,0:15:36.12:0,36,540	0/0:16,0:16:36.11:0,36,534	0/0:17,0:18:53.67:0,54,793	0/0:26,0:26:72.24:0,72,1101	0/0:12,0:15:44.03:0,44,539	0/0:26,0:25:63.16:0,63,919	0/0:23,0:24:65.69:0,66,929	0/0:3,0:3:9.03:0,9,133
chr10	53694442	.	A	AG	582.95	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-5.224;DP=661;FS=27.955;HRun=6;HaplotypeScore=68.0835;InbreedingCoeff=0.9048;MQ=61.92;MQ0=9;MQRankSum=0.603;QD=20.82;ReadPosRankSum=-3.745;VQSLOD=1.1700;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:54.45:0,54,768	0/0:14,0:14:36.08:0,36,367	0/0:44,0:25:51.06:0,51,508	0/0:47,1:21:42.72:0,43,386	0/0:20,0:20:48.10:0,48,490	0/0:32,0:32:81.18:0,81,826	0/0:21,0:21:54.07:0,54,534	1/1:6,22:26:54.17:678,54,0	0/0:20,0:20:60.12:0,60,605	0/0:21,0:21:54.10:0,54,544	0/0:20,0:20:54.12:0,54,551	0/0:29,0:29:78.17:0,78,796	0/0:18,0:18:45.10:0,45,459	0/0:21,0:21:57.08:0,57,571	0/0:29,0:29:78.17:0,78,795	0/0:23,0:23:54.12:0,54,551	0/0:33,0:33:87.19:0,87,887	0/0:17,0:17:45.06:0,45,447	0/0:28,0:27:69.15:0,69,704	0/0:17,0:17:42.09:0,42,427	0/0:21,0:20:48.10:0,48,490	0/0:26,0:26:72.16:0,72,731	0/0:17,0:17:45.10:0,45,459	0/0:16,0:16:41.58:0,42,426	0/0:14,0:13:33.07:0,33,337	0/0:23,0:23:63.13:0,63,637	0/0:25,0:25:57.07:0,57,564	0/0:2,0:2:6.01:0,6,61
chr10	53694622	.	G	GCCC	981.76	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-5.712;DP=675;FS=2.010;HRun=6;HaplotypeScore=93.2167;InbreedingCoeff=0.8449;MQ=86.96;MQ0=0;MQRankSum=-3.132;QD=37.76;ReadPosRankSum=-3.513;VQSLOD=2.2175;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:81.21:0,81,1128	0/0:7,0:7:18.03:0,18,235	0/0:19,0:19:50.89:0,51,710	0/0:29,0:29:60.16:0,60,830	0/0:24,0:24:66.21:0,66,937	0/0:22,0:22:57.18:0,57,808	0/0:26,0:26:72.23:0,72,1021	1/1:10,16:26:51.18:1076,51,0	0/0:21,0:21:57.18:0,57,809	0/0:33,0:33:93.28:0,93,1286	0/0:30,0:30:84.28:0,84,1192	0/0:28,0:28:78.25:0,78,1107	0/0:21,0:21:60.19:0,60,833	0/0:27,0:27:81.26:0,81,1132	0/0:36,0:36:96.30:0,96,1345	0/0:31,0:31:90.30:0,90,1277	0/0:23,0:23:51.16:0,51,724	0/0:18,0:18:45.14:0,45,639	0/0:19,0:19:54.18:0,54,766	0/0:32,0:32:93.31:0,93,1320	0/0:22,0:22:63.21:0,63,894	0/0:29,0:29:81.26:0,81,1147	0/0:18,0:18:51.17:0,51,724	0/0:20,0:20:60.18:0,60,830	0/0:19,0:19:51.15:0,51,706	0/0:35,0:35:96.31:0,96,1362	0/0:23,0:23:66.22:0,66,935	0/0:2,0:2:3.01:0,3,43
chr10	53695087	.	GT	G	10123.01	PASS	AB=1.000;AC=30;AF=0.536;AN=56;BaseQRankSum=4.854;DP=490;FS=2.894;HRun=1;HaplotypeScore=53.3781;InbreedingCoeff=0.8751;MQ=73.94;MQ0=0;MQRankSum=0.399;QD=34.08;ReadPosRankSum=2.197;VQSLOD=4.7466;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:42.10:0,42,618	0/0:7,0:7:21.07:0,21,326	0/1:10,0:10:1.27:1,0,285	0/0:7,0:7:15.02:0,15,212	1/1:0,34:34:96.14:1269,96,0	1/1:0,12:12:33.11:461,33,0	1/1:0,8:8:24.08:335,24,0	0/1:24,0:24:99:105,0,110	1/1:0,14:14:39.13:544,39,0	1/1:0,24:24:72.17:935,72,0	1/1:0,20:20:54.18:754,54,0	0/0:21,0:21:63.11:0,63,900	0/0:9,0:9:27.06:0,27,383	1/1:0,17:17:45.10:596,45,0	0/0:20,0:20:60.17:0,60,903	0/0:24,0:24:72.22:0,72,1089	0/0:26,0:26:43.73:0,44,278	0/0:18,0:18:22.94:0,23,170	1/1:0,18:18:54.12:713,54,0	1/1:0,31:31:90.19:1208,90,0	1/1:0,5:5:15.05:209,15,0	0/0:23,0:23:69.21:0,69,1076	0/0:20,0:20:60.19:0,60,933	0/0:4,0:4:12.04:0,12,191	1/1:0,21:21:51.17:712,51,0	1/1:0,27:27:81.26:1110,81,0	1/1:0,26:26:69.23:963,69,0	1/1:1,5:6:15.05:209,15,0
chr10	53700740	.	CCTTGAAGGGGGG	C	994.92	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=5.641;DP=513;FS=2.164;HRun=0;HaplotypeScore=173.5358;InbreedingCoeff=0.7590;MQ=83.55;MQ0=0;MQRankSum=0.363;QD=12.44;ReadPosRankSum=-0.923;VQSLOD=2.7804;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:54.18:0,54,2260	0/0:8,0:8:12:0,12,475	0/0:22,0:22:9.03:0,9,226	0/0:24,0:24:17.63:0,18,256	0/0:20,0:20:33.11:0,33,1520	0/0:12,0:12:15.01:0,15,683	0/0:25,0:25:27.08:0,27,1179	1/1:18,7:25:21.05:404,21,0	0/0:20,0:20:42.14:0,42,1899	0/0:22,0:22:39.13:0,39,1794	0/0:13,0:13:24.08:0,24,983	0/0:11,0:11:18.06:0,18,1031	0/0:12,0:12:30.10:0,30,1402	0/0:14,0:14:36.12:0,36,1813	0/0:18,0:18:36.12:0,36,1839	0/0:20,0:20:33.10:0,33,1415	1/1:16,12:28:13.29:513,13,0	1/1:6,6:12:6.02:206,6,0	0/1:15,0:15:4.94:5,0,433	0/0:21,0:21:42.09:0,42,2033	0/0:27,0:27:39.12:0,39,1580	0/0:12,0:12:27.09:0,27,1232	0/0:12,0:12:18.06:0,18,1013	0/0:25,0:25:54.17:0,54,2432	0/0:18,0:18:39.12:0,39,1546	0/0:17,0:17:39.13:0,39,1746	0/0:22,0:22:39.10:0,39,1881	0/0:5,0:5:6.02:0,6,351
chr10	53701841	.	TG	T	1274.60	PASS	AB=0.750;AC=7;AF=0.125;AN=56;BaseQRankSum=5.146;DP=649;FS=2.872;HRun=10;HaplotypeScore=72.8993;InbreedingCoeff=0.8174;MQ=74.36;MQ0=4;MQRankSum=0.142;QD=17.70;ReadPosRankSum=0.623;VQSLOD=4.2659;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:40.55:0,41,686	0/0:11,0:11:30.04:0,30,305	0/0:30,0:22:5.64:0,6,144	0/0:24,1:17:18.86:0,19,175	0/0:24,0:24:49.87:0,50,509	0/0:23,0:23:47.06:0,47,455	0/0:28,1:29:39.13:0,39,622	1/1:6,30:36:80.82:743,81,0	0/0:20,0:20:42.09:0,42,451	0/0:24,0:24:36.29:0,36,470	0/0:17,0:17:27.06:0,27,288	0/0:23,1:24:21.63:0,22,402	0/0:20,0:20:27.64:0,28,402	0/0:28,0:28:59.71:0,60,678	0/0:31,0:31:72.09:0,72,732	0/0:20,0:20:42.07:0,42,441	1/1:2,19:21:50.99:442,51,0	1/1:2,10:12:26.97:228,27,0	0/0:17,0:17:18.02:0,18,270	0/0:25,1:26:22.07:0,22,428	0/0:25,0:25:40.41:0,40,382	0/0:22,0:22:48.08:0,48,496	0/0:20,0:20:39.02:0,39,387	0/0:23,0:23:54.06:0,54,554	0/0:26,0:26:38.97:0,39,371	0/0:26,0:26:56.84:0,57,551	0/0:25,0:25:43.22:0,43,476	0/1:2,1:3:8.38:8,0,44
chr10	53703073	.	A	AGTGT	3914.81	PASS	AB=0.902;AC=29;AF=0.537;AN=54;BaseQRankSum=8.044;DP=755;FS=0.000;HRun=0;HaplotypeScore=177.1044;InbreedingCoeff=0.6914;MQ=61.01;MQ0=5;MQRankSum=-7.375;QD=9.79;ReadPosRankSum=-4.162;VQSLOD=2.0706;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:50:73.83:0,74,1069	0/0:10,0:11:26.82:0,27,371	0/0:20,0:15:3.01:0,3,42	./.	1/1:15,0:22:5.99:118,6,0	1/1:13,10:26:18.02:328,18,0	1/1:19,3:25:15.02:259,15,0	0/1:25,0:24:22.50:36,0,22	1/1:17,4:21:24:387,24,0	1/1:36,0:36:41.79:604,42,0	1/1:21,0:21:8.66:58,9,0	0/0:32,0:33:49.57:0,50,669	0/0:18,0:20:32.85:0,33,470	0/1:14,7:24:13.51:237,0,14	0/0:33,0:36:22.66:0,23,730	0/0:30,0:36:20.68:0,21,730	0/0:33,0:33:23.69:0,24,212	0/1:14,0:14:13.82:14,0,35	1/1:16,0:16:26.38:276,26,0	1/1:22,0:21:5.97:61,6,0	1/1:35,0:36:8.69:86,9,0	0/0:20,0:21:10.41:0,10,443	0/0:25,0:27:48.12:0,48,658	0/0:39,0:42:24.41:0,24,946	1/1:14,13:32:10.82:174,11,0	1/1:47,0:46:74.33:982,74,0	1/1:19,0:18:17.11:122,17,0	1/1:12,0:12:20.58:174,21,0
chr10	53703996	.	C	CT	752.04	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=-7.966;DP=639;FS=0.677;HRun=9;HaplotypeScore=64.0643;InbreedingCoeff=0.7676;MQ=69.08;MQ0=0;MQRankSum=0.574;QD=16.35;ReadPosRankSum=2.306;VQSLOD=3.8463;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,1:41:77.77:0,78,898	0/0:8,0:8:14.97:0,15,126	0/1:9,0:9:5.80:6,0,86	0/0:7,0:7:12.40:0,12,94	0/0:37,0:37:92.92:0,93,802	0/0:26,0:26:68.98:0,69,599	0/0:21,1:22:26.82:0,27,462	0/0:31,0:31:74.96:0,75,648	0/0:18,0:19:50.36:0,50,425	0/0:17,1:18:11.79:0,12,331	0/0:13,0:13:32.98:0,33,287	0/0:18,0:18:35.97:0,36,312	0/0:28,0:28:62.98:0,63,547	0/0:20,0:21:56.01:0,56,475	0/0:31,0:32:76.96:0,77,647	0/0:31,0:31:77.96:0,78,674	1/1:5,16:21:19.07:439,19,0	1/1:2,14:16:39.11:431,39,0	0/0:27,0:27:74.98:0,75,651	0/0:21,0:21:59.92:0,60,510	0/0:29,0:29:77.98:0,78,677	0/0:28,0:28:68.95:0,69,599	0/0:24,0:24:62.85:0,63,547	0/0:35,0:35:95.98:0,96,833	0/0:15,0:15:35.98:0,36,313	0/0:28,0:29:52.99:0,53,449	0/0:29,0:28:59.97:0,60,517	0/0:4,0:4:8.99:0,9,78
chr10	53704443	.	CA	C	2414.54	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=12.350;DP=718;FS=8.004;HRun=2;HaplotypeScore=74.6857;InbreedingCoeff=0.9998;MQ=79.19;MQ0=0;MQRankSum=-1.007;QD=34.01;ReadPosRankSum=-3.351;VQSLOD=2.1694;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,102,1482	0/0:14,0:14:42.12:0,42,588	0/0:19,0:19:54.16:0,54,755	0/0:17,0:17:41.33:0,41,629	0/0:34,0:34:99:0,99,1442	0/0:26,0:26:72.23:0,72,1059	0/0:32,0:32:87.28:0,87,1284	1/1:1,39:40:99:1468,117,0	0/0:35,0:35:96.31:0,96,1418	0/0:34,0:34:99:0,99,1446	0/0:14,0:14:42.14:0,42,628	0/0:13,0:13:33.11:0,33,494	0/0:24,0:24:63.20:0,63,924	0/0:17,0:17:51.17:0,51,745	0/0:32,0:32:90.28:0,90,1308	0/0:29,0:29:84.28:0,84,1258	1/1:0,16:16:42.14:545,42,0	1/1:0,15:15:42.14:544,42,0	0/0:27,0:27:75.24:0,75,1102	0/0:36,0:36:99:0,102,1466	0/0:26,0:26:75.25:0,75,1122	0/0:25,0:25:72.22:0,72,1054	0/0:26,0:26:78.05:0,78,1136	0/0:23,0:22:57.19:0,57,854	0/0:26,0:26:72.23:0,72,1060	0/0:27,0:27:75.23:0,75,1101	0/0:36,0:35:96.32:0,96,1432	0/0:19,0:19:54.14:0,54,784
chr10	53704800	.	TAAGA	T	239.90	PASS	AB=0.964;AC=6;AF=0.125;AN=48;BaseQRankSum=-0.300;DP=498;FS=1.094;HRun=0;HaplotypeScore=94.6075;InbreedingCoeff=0.1502;MQ=72.11;MQ0=3;MQRankSum=-0.845;QD=2.73;ReadPosRankSum=1.175;VQSLOD=1.8762;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:15:0,15,184	0/0:9,0:9:3.01:0,3,69	./.	./.	0/0:30,0:30:33.06:0,33,549	0/0:21,0:20:21.07:0,21,485	0/1:15,0:15:9.87:10,0,225	./.	0/0:16,0:16:18.01:0,18,266	0/0:24,0:24:36.06:0,36,501	0/0:15,0:15:3:0,3,28	0/0:19,0:19:33.08:0,33,524	0/0:16,0:16:21.06:0,21,417	0/0:13,0:12:8.99:0,9,149	0/0:20,0:19:30.09:0,30,561	0/0:21,0:21:18.04:0,18,244	0/1:21,0:21:34.31:82,0,34	0/1:14,0:14:4.53:96,0,5	./.	0/0:18,0:18:5.79:0,6,135	0/0:15,0:15:11.90:0,12,86	0/0:29,0:29:18.05:0,18,351	1/1:16,10:26:6.53:131,7,0	0/1:10,2:12:36.41:36,0,37	0/0:12,0:12:20.88:0,21,222	0/0:17,0:17:8.99:0,9,82	0/0:24,0:23:20.92:0,21,208	0/0:7,0:6:3.01:0,3,50
chr10	53704851	.	GAA	G	182.95	PASS	AB=0.833;AC=2;AF=0.036;AN=56;BaseQRankSum=5.331;DP=390;FS=2.530;HRun=3;HaplotypeScore=77.9620;InbreedingCoeff=-0.0521;MQ=45.27;MQ0=13;MQRankSum=-3.108;QD=6.78;ReadPosRankSum=-1.448;VQSLOD=-0.3646;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:13:32.81:0,33,446	0/0:6,0:6:15.05:0,15,228	0/0:13,0:1:3.01:0,3,43	0/0:9,0:3:9.03:0,9,127	0/0:24,0:23:66.21:0,66,1044	0/0:15,0:13:33.11:0,33,561	0/0:15,0:15:45.05:0,45,642	0/1:9,9:16:58.14:246,0,58	0/0:16,0:12:27.02:0,27,431	0/0:17,0:17:48.51:0,49,781	0/1:9,0:8:25.42:25,0,63	0/0:18,0:18:48.16:0,48,798	0/0:15,0:15:42.14:0,42,733	0/0:8,0:7:18.06:0,18,298	0/0:19,0:17:48.15:0,48,781	0/0:11,0:11:27.09:0,27,473	0/0:13,0:12:20.57:0,21,286	0/0:11,0:11:21.30:0,21,245	0/0:7,0:4:11.94:0,12,111	0/0:21,0:21:25.99:0,26,385	0/0:6,0:6:12:0,12,158	0/0:14,0:13:36.11:0,36,574	0/0:26,0:25:42.49:0,42,551	0/0:6,0:6:10.54:0,11,193	0/0:19,0:14:36.02:0,36,513	0/0:13,0:13:26.78:0,27,303	0/0:17,0:16:35.58:0,36,459	0/0:10,0:8:11.96:0,12,116
chr10	53704857	.	AAG	A	1317.23	PASS	AB=0.989;AC=19;AF=0.339;AN=56;BaseQRankSum=5.708;DP=410;FS=5.779;HRun=0;HaplotypeScore=80.0849;InbreedingCoeff=0.4811;MQ=44.61;MQ0=15;MQRankSum=-5.855;QD=8.18;ReadPosRankSum=-1.710;VQSLOD=2.5683;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:15:33.03:0,33,425	0/0:9,0:9:24.08:0,24,360	0/0:15,0:1:3.01:0,3,45	0/0:15,0:3:9.03:0,9,134	0/0:25,0:24:56.27:0,56,709	0/0:14,0:12:30.10:0,30,478	0/0:19,0:17:39.07:0,39,522	0/1:19,0:17:23.36:107,0,23	0/0:16,0:12:18.06:0,18,272	0/1:16,1:17:63.76:150,0,64	1/1:5,4:8:9.01:97,9,0	0/0:19,0:19:39.05:0,39,523	0/0:16,0:16:42.12:0,42,642	0/0:8,0:7:14.54:0,15,197	0/0:20,0:18:48.09:0,48,631	0/0:12,0:12:18.91:0,19,253	0/1:13,0:12:7.52:8,0,68	0/1:10,0:10:10.48:10,0,15	1/1:6,1:4:2.94:20,3,0	1/1:6,16:22:34.29:400,34,0	1/1:2,4:6:9.03:114,9,0	0/0:13,0:13:30.08:0,30,447	0/0:25,0:24:36.04:0,36,534	0/0:7,0:7:6.02:0,6,78	0/1:20,0:15:63.15:63,0,274	1/1:8,5:13:20.20:230,20,0	1/1:5,12:16:20.98:230,21,0	1/1:7,1:6:1.65:70,2,0
chr10	53704879	.	GA	G	223.41	PASS	AB=0.710;AC=1;AF=0.018;AN=56;BaseQRankSum=3.558;DP=459;FS=28.666;HRun=1;HaplotypeScore=93.3323;InbreedingCoeff=-0.0480;MQ=38.19;MQ0=26;MQRankSum=-3.580;QD=10.15;ReadPosRankSum=-1.741;VQSLOD=-0.2456;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:16:27.08:0,27,412	0/0:10,0:10:27.09:0,27,412	0/0:23,0:1:3.01:0,3,46	0/0:25,0:3:8.98:0,9,106	0/0:28,0:26:33.11:0,33,486	0/0:16,0:13:24.07:0,24,332	0/0:20,0:18:37.50:0,38,489	0/1:13,9:17:32.55:298,0,33	0/0:17,0:12:24.08:0,24,351	0/0:17,0:16:47.56:0,48,602	0/0:13,0:12:6.02:0,6,87	0/0:14,0:14:33.11:0,33,502	0/0:18,0:18:51.09:0,51,718	0/0:13,0:12:14.13:0,14,147	0/0:22,0:19:43.10:0,43,557	0/0:9,0:9:24.08:0,24,365	0/0:13,0:12:23.99:0,24,309	0/0:8,0:8:9.10:0,9,161	0/0:10,0:6:11.86:0,12,167	0/0:34,0:34:32.40:0,32,491	0/0:9,0:9:3.01:0,3,67	0/0:10,0:10:21.07:0,21,317	0/0:17,0:16:42.13:0,42,617	0/0:3,0:3:3.01:0,3,46	0/0:23,0:18:25.55:0,26,319	0/0:19,0:19:43.90:0,44,574	0/0:18,0:16:26.84:0,27,357	0/0:10,0:7:14.66:0,15,228
chr10	53704902	.	AGAG	A	473.76	PASS	AB=0.948;AC=8;AF=0.148;AN=54;BaseQRankSum=4.670;DP=478;FS=35.021;HRun=0;HaplotypeScore=112.7856;InbreedingCoeff=0.0589;MQ=36.99;MQ0=37;MQRankSum=-3.178;QD=3.88;ReadPosRankSum=-1.707;VQSLOD=0.3086;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:19:38.92:0,39,773	0/0:9,0:9:27.09:0,27,589	./.	0/0:38,0:2:2.53:0,3,29	0/0:17,0:15:18.05:0,18,268	0/0:17,0:14:12.03:0,12,214	0/1:21,0:20:7.64:8,0,153	0/1:12,10:18:79.70:403,0,80	0/1:19,0:14:4.88:5,0,231	0/0:18,0:18:54.11:0,54,870	0/0:16,0:16:13.11:0,13,118	0/0:17,0:17:45.15:0,45,852	0/0:17,0:17:48.14:0,48,894	0/0:12,0:12:11.66:0,12,158	0/0:15,0:13:33.10:0,33,671	0/0:13,0:13:39.13:0,39,777	0/1:13,0:12:39.71:40,0,248	0/1:8,0:8:98.13:98,0,131	0/0:8,0:7:21.04:0,21,319	0/0:29,0:28:23.13:0,23,370	1/1:12,0:12:5.01:38,5,0	0/0:10,0:10:21.06:0,21,377	0/0:15,0:13:36.12:0,36,833	0/0:8,0:8:15.05:0,15,273	0/1:27,0:22:6.27:6,0,113	0/0:21,0:21:56.52:0,57,1047	0/0:22,0:21:35.75:0,36,461	0/0:7,0:6:15.05:0,15,290
chr10	53704907	.	G	GGA	1073.42	PASS	AB=0.967;AC=16;AF=0.296;AN=54;BaseQRankSum=6.275;DP=483;FS=0.570;HRun=0;HaplotypeScore=112.1775;InbreedingCoeff=-0.2982;MQ=37.51;MQ0=35;MQRankSum=-7.208;QD=3.73;ReadPosRankSum=-4.208;VQSLOD=1.2001;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:18:45.11:0,45,651	0/0:8,0:8:24.05:0,24,343	./.	0/0:32,0:2:2.82:0,3,14	0/1:16,0:14:7.10:7,0,80	0/1:13,4:15:0.86:1,0,77	0/1:24,0:22:51.67:122,0,52	0/1:24,0:20:43.96:49,0,44	0/1:21,0:16:82.19:145,0,82	0/1:17,0:17:12.52:13,0,271	0/1:18,0:18:50.02:125,0,50	0/0:18,0:18:45.15:0,45,693	0/0:16,0:16:47.75:0,48,696	0/1:14,1:14:41.56:125,0,42	0/0:14,0:12:29.31:0,29,439	0/0:14,0:14:42.11:0,42,613	0/1:12,0:12:45.93:46,0,159	0/1:9,0:9:35.78:36,0,65	0/0:7,0:6:17.77:0,18,153	0/1:27,0:26:7.26:7,0,157	1/1:12,0:12:0.14:45,0,0	0/0:9,0:9:21.07:0,21,334	0/0:16,0:14:39.13:0,39,610	0/0:8,0:8:15.05:0,15,235	0/1:21,6:22:42.07:62,0,42	0/1:20,0:20:99:100,0,392	0/1:28,0:27:99:339,0,114	0/0:7,0:6:6.70:0,7,111
chr10	53704913	.	GGA	G	53.45	PASS	AB=0.834;AC=8;AF=0.148;AN=54;BaseQRankSum=5.423;DP=383;FS=14.489;HRun=0;HaplotypeScore=94.3098;InbreedingCoeff=-0.1945;MQ=39.95;MQ0=29;MQRankSum=-4.523;QD=0.61;ReadPosRankSum=0.827;VQSLOD=1.0389;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:15:39.12:0,39,741	0/0:8,0:8:24.06:0,24,435	./.	0/0:32,0:2:2.53:0,3,58	0/0:9,0:9:11.63:0,12,170	0/0:10,0:11:4.21:0,4,139	0/0:15,0:13:24.79:0,25,404	0/0:26,0:24:60.03:0,60,937	0/1:7,2:10:25.03:25,0,259	0/1:12,1:13:9.28:9,0,498	0/0:11,2:13:1.38:0,1,378	0/0:14,0:14:33.11:0,33,662	0/0:12,0:12:35.91:0,36,682	0/0:12,0:11:20.56:0,21,367	0/0:12,0:11:33.08:0,33,586	0/0:12,0:12:33.11:0,33,651	0/0:12,0:12:29.24:0,29,446	0/1:6,1:7:15.88:16,0,89	0/1:4,2:5:0.43:0,0,123	0/1:11,4:14:39.28:39,0,419	0/0:10,1:11:5.06:0,5,186	0/0:12,0:12:36.12:0,36,671	0/0:12,0:10:30.10:0,30,579	0/0:7,0:7:15.05:0,15,288	0/1:19,1:20:51.53:52,0,93	0/1:12,1:14:16.10:16,0,482	0/0:21,2:22:15.24:0,15,916	0/1:1,0:2:19.62:20,0,51
chr10	53705620	.	A	AT	78	PASS	AB=0.733;AC=1;AF=0.018;AN=56;BaseQRankSum=3.430;DP=710;FS=8.928;HRun=1;HaplotypeScore=66.5920;InbreedingCoeff=-0.0182;MQ=80.82;MQ0=0;MQRankSum=-3.393;QD=7.09;ReadPosRankSum=-2.194;VQSLOD=-0.6980;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,117,1591	0/0:9,0:9:27.06:0,27,358	0/0:16,0:16:48.14:0,48,652	0/0:19,0:19:46.74:0,47,595	0/0:30,0:30:87.28:0,87,1199	0/0:17,0:17:51.15:0,51,695	0/0:23,0:23:69.20:0,69,929	0/0:24,0:24:72.23:0,72,974	0/0:32,0:32:96.32:0,96,1341	0/0:30,0:30:87.27:0,87,1163	0/0:24,0:24:66.21:0,66,904	0/0:36,0:36:99:0,105,1469	0/0:25,0:25:75.22:0,75,1026	0/0:16,0:16:48.13:0,48,636	0/0:30,0:30:87.28:0,87,1199	0/0:31,0:31:93.31:0,93,1297	0/0:27,0:27:75.25:0,75,1048	0/0:21,0:21:63.21:0,63,880	0/0:19,0:19:54.15:0,54,707	0/0:25,0:25:69.22:0,69,944	0/0:48,0:48:99:0,144,1973	0/0:32,0:32:93.29:0,93,1266	0/0:28,0:28:81.24:0,81,1095	0/0:25,0:25:75.23:0,75,1028	0/0:24,0:24:72.24:0,72,1007	0/0:34,0:34:99:0,102,1423	0/0:14,0:14:36.12:0,36,503	0/1:7,4:11:99:152,0,260
chr10	53707623	.	GACAC	G	449	PASS	AB=0.934;AC=6;AF=0.120;AN=50;BaseQRankSum=0.624;DP=630;FS=3.624;HRun=0;HaplotypeScore=117.8868;InbreedingCoeff=0.2032;MQ=64.39;MQ0=19;MQRankSum=2.168;QD=3.56;ReadPosRankSum=0.185;VQSLOD=2.1910;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:37,1:38:19.48:19,0,394	0/0:9,0:11:11.78:0,12,222	./.	0/0:48,0:29:0:0,0,0	0/0:7,0:6:3:0,3,52	0/0:18,0:22:6.02:0,6,124	0/0:26,0:25:21.05:0,21,363	./.	0/0:28,0:31:9.03:0,9,162	0/0:13,0:17:21.06:0,21,332	0/0:7,0:10:9.79:0,10,167	0/1:14,1:15:16.49:16,0,465	0/1:25,0:24:8.61:9,0,684	0/0:29,0:28:24.08:0,24,396	0/0:23,0:22:24.04:0,24,424	0/0:11,0:12:11.75:0,12,148	1/1:14,15:29:24.38:340,24,0	0/1:15,4:17:25.54:186,0,26	0/0:19,0:19:21.07:0,21,386	0/0:14,0:14:15.03:0,15,256	0/0:38,0:38:33.11:0,33,604	0/0:13,0:13:14.76:0,15,233	0/0:12,0:12:8.88:0,9,108	0/0:43,0:44:59.47:0,59,1111	0/0:19,0:19:15.05:0,15,262	0/0:16,0:20:30:0,30,489	0/0:11,0:18:15.03:0,15,243	./.
chr10	53708641	.	CG	C	1018.03	PASS	AB=0.764;AC=33;AF=0.589;AN=56;BaseQRankSum=-1.589;DP=205;FS=5.300;HRun=10;HaplotypeScore=30.5316;InbreedingCoeff=0.5153;MQ=88.29;MQ0=0;MQRankSum=-0.665;QD=7.71;ReadPosRankSum=3.603;VQSLOD=0.3545;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:5:6:0,6,58	0/0:3,0:3:4.22:0,4,24	0/0:9,0:6:6.01:0,6,60	0/0:17,0:15:16.11:0,16,115	1/1:4,2:6:9.46:78,9,0	1/1:1,7:8:8.99:78,9,0	1/1:9,3:12:17.54:139,18,0	1/1:2,0:2:2.22:7,2,0	1/1:7,7:14:17.97:156,18,0	1/1:4,3:7:3:26,3,0	1/1:2,4:6:5.98:48,6,0	0/0:9,0:9:9:0,9,89	0/0:9,0:9:18.01:0,18,178	0/1:5,5:10:1.87:43,0,2	0/0:7,0:7:15.04:0,15,162	0/0:8,0:8:17.98:0,18,157	1/1:5,0:5:2.74:12,3,0	0/1:4,2:6:18.34:18,0,39	1/1:3,3:6:8.99:78,9,0	1/1:1,0:2:0.89:2,1,0	1/1:7,13:20:21.87:184,22,0	0/0:1,0:1:2.99:0,3,24	0/0:5,0:5:3.01:0,3,33	0/1:6,1:7:19.69:20,0,72	1/1:1,3:4:6:52,6,0	1/1:1,4:5:9:78,9,0	1/1:2,7:9:17.99:154,18,0	1/1:3,0:3:3:26,3,0
chr10	53710887	.	A	AG	2396.59	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.868;DP=601;FS=8.289;HRun=0;HaplotypeScore=59.5348;InbreedingCoeff=0.9988;MQ=78.97;MQ0=0;MQRankSum=-2.062;QD=43.57;ReadPosRankSum=-0.930;VQSLOD=3.4206;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:87.22:0,87,1172	0/0:14,0:14:42.14:0,42,587	0/0:28,0:28:81.27:0,81,1117	0/0:18,0:18:47.94:0,48,662	0/0:31,0:31:90.28:0,90,1239	0/0:23,0:22:69.23:0,69,965	0/0:18,0:18:54.18:0,54,755	1/1:1,32:33:96.33:1532,96,0	0/0:26,0:26:75.25:0,75,1048	0/0:22,0:22:66.18:0,66,888	0/0:12,0:11:36.11:0,36,486	0/0:20,0:20:60.18:0,60,816	0/0:12,0:12:36.12:0,36,503	0/0:27,0:27:78.22:0,78,1053	0/0:30,0:30:90.27:0,90,1224	0/0:34,0:34:96.30:0,96,1311	1/1:0,8:8:24.08:383,24,0	1/1:0,14:14:39.13:623,39,0	0/0:17,0:17:51.17:0,51,713	0/0:18,0:18:48.16:0,48,666	0/0:37,0:37:99:0,111,1498	0/0:16,0:16:48.13:0,48,635	0/0:18,0:18:51.17:0,51,712	0/0:21,0:21:63.19:0,63,860	0/0:9,0:9:27.09:0,27,377	0/0:18,0:18:51.17:0,51,713	0/0:24,0:24:72.23:0,72,988	0/0:23,0:23:69.23:0,69,964
chr10	53711007	.	AGTGT	A	163.88	PASS	AB=0.913;AC=7;AF=0.152;AN=46;BaseQRankSum=2.567;DP=562;FS=0.000;HRun=0;HaplotypeScore=93.6840;InbreedingCoeff=0.4606;MQ=65.15;MQ0=18;MQRankSum=0.850;QD=2.16;ReadPosRankSum=1.241;VQSLOD=0.9665;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:27.09:0,27,522	0/0:6,0:6:3.01:0,3,51	./.	0/0:27,0:16:0:0,0,0	./.	./.	1/1:20,5:24:6.02:92,6,0	0/0:26,0:25:0.47:0,0,1	1/1:15,1:17:5.89:61,6,0	0/0:20,0:19:15.51:0,16,253	0/0:15,0:15:6.02:0,6,138	0/0:16,0:16:9.02:0,9,135	0/0:17,0:16:3.01:0,3,70	1/1:11,2:13:6.02:92,6,0	0/0:27,0:25:9.03:0,9,147	0/0:22,0:22:15.52:0,16,269	0/1:19,1:21:37.01:37,0,46	0/0:14,0:15:3.99:0,4,15	./.	0/0:18,0:17:6.02:0,6,120	0/0:39,0:38:45.14:0,45,817	0/0:15,0:15:12.02:0,12,205	0/0:22,0:22:11.82:0,12,192	0/0:28,0:27:29.84:0,30,551	./.	0/0:20,0:20:9.03:0,9,183	0/0:17,0:17:18.03:0,18,353	0/0:8,0:12:6.02:0,6,100
chr10	53711794	.	T	TC	3062.54	PASS	AB=0.823;AC=24;AF=0.429;AN=56;BaseQRankSum=-6.330;DP=590;FS=0.000;HRun=2;HaplotypeScore=56.7771;InbreedingCoeff=0.2580;MQ=41.80;MQ0=162;MQRankSum=4.071;QD=8.28;ReadPosRankSum=-0.575;VQSLOD=0.6171;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:22:48.30:0,48,455	0/0:5,0:3:4.07:0,4,12	0/0:52,0:8:18.76:0,19,151	0/1:69,0:9:17.37:17,0,118	1/1:4,1:2:3.01:43,3,0	0/1:14,6:13:54.13:148,0,54	0/1:19,4:17:62.22:221,0,62	0/1:26,0:15:30.26:30,0,35	1/1:11,8:10:17.01:296,17,0	0/0:13,0:4:10.09:0,10,86	1/1:2,2:3:6.02:86,6,0	0/0:13,0:10:27.04:0,27,305	0/0:10,0:6:13.10:0,13,124	1/1:5,11:14:21.39:341,21,0	0/0:24,0:16:33.48:0,33,466	0/0:16,0:15:42.05:0,42,488	1/1:7,9:13:14.38:231,14,0	0/1:10,5:13:58.48:128,0,58	0/1:26,3:7:36.82:108,0,37	1/1:7,4:7:12.03:173,12,0	0/1:34,23:44:21.18:551,0,21	0/0:9,0:7:12.04:0,12,149	0/0:18,0:17:40.14:0,40,429	0/0:30,0:15:32.05:0,32,377	0/1:15,7:18:1.98:377,0,2	1/1:15,10:17:16.84:382,17,0	0/1:3,3:5:25.39:77,0,25	0/1:4,1:2:0.22:38,0,0
chr10	53712064	.	AT	A	1414.05	PASS	AB=0.955;AC=7;AF=0.125;AN=56;BaseQRankSum=10.981;DP=619;FS=6.260;HRun=8;HaplotypeScore=60.9814;InbreedingCoeff=0.8471;MQ=81.94;MQ0=0;MQRankSum=-3.138;QD=16.64;ReadPosRankSum=-3.511;VQSLOD=2.8158;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:81.21:0,81,962	0/0:14,0:14:42.13:0,42,507	0/1:20,1:21:9.38:9,0,422	0/0:13,0:13:33.09:0,33,390	0/0:32,0:32:81.25:0,81,978	0/0:31,0:31:81.23:0,81,959	0/0:15,0:15:45.14:0,45,544	1/1:3,24:27:69.08:655,69,0	0/0:31,0:31:84.24:0,84,1000	0/0:22,0:22:60.18:0,60,725	0/0:23,0:23:66.20:0,66,797	0/0:13,0:13:39.12:0,39,471	0/0:17,0:17:45.12:0,45,528	0/0:21,0:21:57.11:0,57,670	0/0:17,0:17:39.12:0,39,468	0/0:23,0:23:69.19:0,69,811	1/1:1,14:15:42.06:406,42,0	1/1:3,19:22:51.08:492,51,0	0/0:29,0:29:81.25:0,81,978	0/0:39,0:39:99:0,111,1331	0/0:19,0:19:54.15:0,54,641	0/0:24,0:24:63.18:0,63,748	0/0:32,0:32:90.28:0,90,1087	0/0:20,0:20:57.17:0,57,689	0/0:25,0:25:72.22:0,72,870	0/0:16,0:16:48.14:0,48,571	0/0:22,0:22:63.19:0,63,761	0/0:6,0:6:15.05:0,15,180
chr10	53713810	.	AAAAAAC	A	1344.64	PASS	AB=1.000;AC=8;AF=0.143;AN=56;BaseQRankSum=1.057;DP=538;FS=2.485;HRun=0;HaplotypeScore=137.5543;InbreedingCoeff=0.7068;MQ=71.78;MQ0=2;MQRankSum=-1.636;QD=12.57;ReadPosRankSum=-3.301;VQSLOD=1.7177;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:78.26:0,78,2267	0/0:8,0:8:24.08:0,24,704	0/0:29,0:17:34.71:0,35,619	0/1:18,0:15:5.94:6,0,291	0/1:22,0:21:27.80:28,0,615	0/0:15,0:15:32:0,32,577	0/0:15,0:15:13.42:0,13,511	1/1:33,0:33:54.70:566,55,0	0/0:12,0:12:13.35:0,13,352	0/0:24,0:24:49.70:0,50,832	0/0:21,0:21:54.16:0,54,938	0/0:24,0:24:69.19:0,69,1903	0/0:16,0:16:29.23:0,29,1233	0/0:9,0:9:24.07:0,24,351	0/0:26,0:26:75.25:0,75,2082	0/0:19,0:19:57.18:0,57,1749	1/1:4,16:20:33.11:675,33,0	1/1:3,11:14:14.25:219,14,0	0/0:20,0:20:30:0,30,910	0/0:17,0:17:45.15:0,45,840	0/0:4,0:4:11.98:0,12,122	0/0:19,0:19:54.10:0,54,1526	0/0:18,0:18:51.17:0,51,1570	0/0:16,0:16:45.15:0,45,1254	0/0:25,0:25:37.23:0,37,927	0/0:30,0:30:66.36:0,66,1317	0/0:20,0:20:31.50:0,32,876	0/0:16,0:16:26.52:0,27,433
chr10	53713811	.	AAAAAC	A	1565.33	PASS	AB=1.000;AC=10;AF=0.179;AN=56;BaseQRankSum=-0.776;DP=541;FS=0.000;HRun=0;HaplotypeScore=126.7214;InbreedingCoeff=0.4968;MQ=71.72;MQ0=2;MQRankSum=-1.722;QD=11.02;ReadPosRankSum=-6.119;VQSLOD=0.1358;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:78.25:0,78,1945	0/0:9,0:9:27.06:0,27,624	0/0:29,0:17:30.77:0,31,531	0/0:18,0:15:7.95:0,8,266	0/1:22,0:21:36.10:36,0,432	0/1:16,0:16:12.17:12,0,394	0/0:15,0:15:12.77:0,13,358	1/1:7,26:33:78.11:1014,78,0	0/1:12,0:12:21.40:21,0,206	0/0:23,0:23:8.42:0,8,543	0/0:21,0:21:35.17:0,35,669	0/0:25,0:25:72.10:0,72,1641	0/0:16,0:16:28.44:0,28,1052	0/0:9,0:9:23.89:0,24,238	0/0:26,0:26:75.24:0,75,1759	0/0:19,0:19:57.18:0,57,1510	1/1:19,1:20:33.11:449,33,0	1/1:13,1:14:14.41:186,14,0	0/0:20,0:20:22.20:0,22,656	0/0:17,0:17:45.10:0,45,634	0/0:4,0:4:8.86:0,9,71	0/0:19,0:19:54.10:0,54,1317	0/0:18,0:18:51.16:0,51,1346	0/0:16,0:16:45.14:0,45,1063	0/1:25,0:25:4:4,0,591	0/0:31,0:31:29.90:0,30,921	0/0:20,0:20:28.09:0,28,624	0/0:16,0:16:15.05:0,15,324
chr10	53713815	.	AC	A	5313.65	PASS	AB=0.984;AC=36;AF=0.643;AN=56;BaseQRankSum=6.627;DP=548;FS=4.648;HRun=1;HaplotypeScore=75.9612;InbreedingCoeff=0.8182;MQ=71.06;MQ0=2;MQRankSum=-3.459;QD=14.60;ReadPosRankSum=-7.038;VQSLOD=1.6746;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:70.71:0,71,727	0/0:10,0:10:30.03:0,30,303	0/1:30,1:19:10.02:10,0,199	0/1:15,0:13:9.30:9,0,82	1/1:21,2:22:51.55:384,52,0	1/1:15,1:16:39.84:296,40,0	1/1:15,0:15:39.27:301,39,0	1/1:27,1:28:78.06:591,78,0	1/1:9,2:11:30.39:245,30,0	1/1:23,0:23:56.33:426,56,0	1/1:22,0:22:50.47:319,50,0	0/0:26,0:26:71.05:0,71,713	0/0:16,0:16:48.04:0,48,481	1/1:9,0:9:26.25:221,26,0	0/0:27,0:27:71.38:0,71,710	0/0:19,0:19:57.15:0,57,631	1/1:18,0:18:32.36:196,32,0	1/1:12,0:13:14:80,14,0	1/1:22,0:22:55.89:362,56,0	1/1:16,0:16:33.15:190,33,0	1/1:5,0:5:14.11:90,14,0	0/0:21,0:21:59.77:0,60,585	0/0:18,0:18:51.99:0,52,551	0/0:20,0:20:1.05:0,1,422	1/1:22,3:25:67.58:531,68,0	1/1:31,0:31:70.69:457,71,0	1/1:25,0:25:67.53:473,68,0	1/1:16,0:16:23.54:131,24,0
chr10	53715755	.	ATAG	A	636.75	PASS	AB=0.924;AC=7;AF=0.130;AN=54;BaseQRankSum=4.465;DP=426;FS=15.483;HRun=0;HaplotypeScore=71.0975;InbreedingCoeff=-0.1491;MQ=63.59;MQ0=36;MQRankSum=1.657;QD=3.91;ReadPosRankSum=-2.434;VQSLOD=-0.0101;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:21,0:20:3.65:4,0,729	0/0:5,0:5:12.04:0,12,264	0/0:64,0:17:2.10:0,2,264	0/1:81,0:12:73.87:74,0,124	0/0:6,0:6:14.98:0,15,273	0/0:16,0:16:42.07:0,42,789	0/0:14,0:14:36.81:0,37,603	0/1:8,8:15:48.12:369,0,48	0/0:10,0:10:21.15:0,21,317	0/0:11,0:11:11.95:0,12,433	0/0:8,1:8:17.99:0,18,342	0/0:6,0:6:17.91:0,18,294	0/1:6,0:5:5.81:6,0,221	0/0:12,0:11:10.64:0,11,385	0/0:10,0:10:29.95:0,30,546	0/0:10,0:10:30.01:0,30,507	0/1:8,1:9:99:143,0,118	0/1:17,2:14:99:154,0,185	0/0:11,0:11:32.80:0,33,536	0/1:11,0:10:0.23:0,0,206	0/0:13,0:13:30.03:0,30,527	0/0:6,0:6:16.85:0,17,287	0/0:12,0:11:25.23:0,25,360	0/0:21,0:21:40.74:0,41,679	0/0:7,0:7:20.97:0,21,363	0/0:10,0:10:29.82:0,30,404	0/0:9,1:9:3.31:0,3,392	./.
chr10	53715758	.	G	GGA	173.32	PASS	AB=0.985;AC=15;AF=0.341;AN=44;BaseQRankSum=-0.496;DP=438;FS=2.982;HRun=0;HaplotypeScore=72.4565;InbreedingCoeff=0.1663;MQ=62.71;MQ0=36;MQRankSum=-0.565;QD=0.81;ReadPosRankSum=-1.695;VQSLOD=1.2480;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:19,0:18:30.54:36,0,31	0/0:5,0:5:2.99:0,3,24	0/1:61,0:15:0:0,0,0	./.	./.	0/0:16,0:18:2.73:0,3,14	0/0:15,0:15:4.56:0,5,20	0/1:20,0:19:0:0,0,0	1/1:9,0:10:3.11:7,3,0	0/1:11,0:11:25.60:33,0,26	./.	./.	1/1:7,0:6:6.02:80,6,0	0/1:11,0:12:6.12:32,0,6	0/0:9,0:9:6.01:0,6,61	0/0:10,0:10:11.47:0,11,92	0/1:9,0:9:2.12:2,0,7	0/0:20,0:15:7.85:0,8,40	0/1:15,0:15:11.07:11,0,34	0/1:10,0:10:0.03:0,0,0	0/0:11,0:13:2.73:0,3,14	./.	0/1:14,0:13:0:0,0,0	1/1:16,6:22:5.92:87,6,0	0/0:9,0:9:5.64:0,6,27	0/0:8,0:9:5.68:0,6,28	0/0:9,0:9:8.43:0,8,40	./.
chr10	53715804	.	AGAGAGAGG	A	743.03	PASS	AB=1.000;AC=6;AF=0.107;AN=56;BaseQRankSum=0.691;DP=369;FS=1.442;HRun=0;HaplotypeScore=98.4408;InbreedingCoeff=0.5203;MQ=55.60;MQ0=9;MQRankSum=-3.036;QD=14.29;ReadPosRankSum=-1.065;VQSLOD=2.4589;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:22:59.81:0,60,703	0/0:5,0:5:12.02:0,12,151	0/0:26,0:7:13.18:0,13,131	0/0:24,0:10:13.49:0,13,92	0/0:9,0:9:7.13:0,7,153	0/0:11,0:11:25.34:0,25,414	0/0:10,0:10:18.03:0,18,208	0/1:22,0:22:99:365,0,120	0/1:8,0:8:38.23:41,0,38	0/0:21,0:21:62.40:0,62,742	0/0:8,0:7:15.01:0,15,220	0/0:15,0:15:32.53:0,33,461	0/0:10,0:9:27.04:0,27,465	0/0:10,0:9:15.18:0,15,240	0/0:11,0:11:27.01:0,27,423	0/0:15,0:15:40.55:0,41,715	1/1:6,0:6:14.82:239,15,0	1/1:5,11:16:14.72:229,15,0	0/0:13,0:12:36.02:0,36,462	0/0:11,0:9:25.54:0,26,284	0/0:21,0:20:42.39:0,42,523	0/0:4,0:4:7.80:0,8,53	0/0:17,0:16:33.93:0,34,532	0/0:15,0:14:14.89:0,15,223	0/0:9,0:9:7.77:0,8,173	0/0:12,0:12:35.79:0,36,383	0/0:7,0:6:13.41:0,13,210	0/0:10,0:9:20.90:0,21,164
chr10	53715850	.	TAAAA	T	801.96	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=6.091;DP=361;FS=4.939;HRun=17;HaplotypeScore=69.7392;InbreedingCoeff=0.9173;MQ=70.38;MQ0=6;MQRankSum=-3.458;QD=17.43;ReadPosRankSum=2.280;VQSLOD=1.1809;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:39.07:0,39,641	0/0:7,0:8:21.05:0,21,311	0/0:36,1:15:21.36:0,21,262	0/0:25,1:13:21.14:0,21,189	0/0:14,0:15:45:0,45,641	0/0:12,0:13:36.09:0,36,532	0/0:8,0:9:21.06:0,21,329	1/1:7,13:21:41.71:444,42,0	0/0:9,0:9:21.07:0,21,430	0/0:12,0:15:33.10:0,33,529	0/0:8,0:10:21.07:0,21,324	0/0:9,0:11:29.27:0,29,442	0/0:5,0:5:15.05:0,15,289	0/0:6,0:6:15.05:0,15,273	0/0:11,0:14:30.08:0,30,480	0/0:12,0:12:36.12:0,36,654	1/1:3,4:7:14.98:188,15,0	1/1:12,6:18:29.54:310,30,0	0/0:11,0:11:27.08:0,27,432	0/0:12,0:13:39.03:0,39,649	0/0:4,0:4:3.90:0,4,41	0/0:5,0:8:21.05:0,21,281	0/0:11,0:11:21.05:0,21,316	0/0:8,0:10:22.01:0,22,385	0/0:9,0:9:22.57:0,23,270	0/0:16,0:19:39.11:0,39,553	0/0:11,0:14:36.10:0,36,564	0/0:6,0:9:21.05:0,21,315
chr10	53724403	.	A	AG	1180.61	PASS	AB=0.699;AC=20;AF=0.357;AN=56;BaseQRankSum=0.903;DP=260;FS=0.738;HRun=0;HaplotypeScore=33.4710;InbreedingCoeff=0.4087;MQ=59.84;MQ0=17;MQRankSum=4.966;QD=8.43;ReadPosRankSum=3.576;VQSLOD=3.3825;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:19:40.10:0,40,277	0/0:2,0:2:6.02:0,6,78	0/0:16,0:7:1.07:0,1,76	0/1:12,0:5:0.64:1,0,40	1/1:13,0:14:17.22:130,17,0	0/1:1,3:4:3.16:52,0,3	1/1:2,5:6:8.91:96,9,0	0/0:16,0:15:38.74:0,39,282	0/1:4,9:13:1.44:86,0,1	0/1:3,7:10:23.69:80,0,24	0/1:9,1:9:5.75:82,0,6	0/0:5,0:5:10.30:0,10,56	0/0:3,0:3:8.97:0,9,80	1/1:2,0:2:1.98:16,2,0	0/0:10,0:9:25.05:0,25,180	0/0:6,0:5:14.92:0,15,124	0/0:11,0:8:14.93:0,15,116	0/0:2,0:2:5.99:0,6,49	1/1:9,2:12:27.36:213,27,0	0/1:7,10:16:35.88:215,0,36	1/1:2,12:13:9:97,9,0	0/0:3,0:3:9:0,9,97	0/0:7,0:7:11:0,11,77	0/0:10,0:9:14.93:0,15,139	0/1:4,2:5:0.62:28,0,1	1/1:4,9:14:18.08:173,18,0	0/0:8,1:5:3.43:0,3,22	0/1:1,4:5:0.97:86,0,1
chr10	53724558	.	CTGTGTG	C	1450.87	PASS	AB=0.728;AC=27;AF=0.563;AN=48;BaseQRankSum=2.829;DP=422;FS=5.145;HRun=0;HaplotypeScore=105.0856;InbreedingCoeff=0.4338;MQ=54.51;MQ0=16;MQRankSum=-2.042;QD=6.75;ReadPosRankSum=2.444;VQSLOD=1.4798;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:32:21.06:0,21,261	0/0:3,0:3:3.01:0,3,69	./.	./.	0/1:8,1:11:31.68:55,0,32	1/1:8,6:17:3.47:62,3,0	0/1:13,0:18:30.76:31,0,141	0/0:26,0:25:0:0,0,0	0/0:7,0:13:9.51:0,10,127	1/1:17,1:19:9.03:163,9,0	./.	./.	1/1:7,2:11:7.51:50,8,0	0/0:7,0:8:3.01:0,3,38	0/0:14,0:16:21.07:0,21,560	0/0:7,0:9:12.02:0,12,268	1/1:8,0:11:3.01:42,3,0	1/1:8,0:8:5.99:52,6,0	1/1:20,3:23:6.98:140,7,0	1/1:9,3:14:4.83:66,5,0	1/1:22,0:21:6.01:96,6,0	0/1:7,1:13:1.39:1,0,31	1/1:4,0:6:0.89:2,1,0	0/0:8,0:16:0.81:0,1,49	0/0:8,0:13:8:0,8,129	1/1:12,8:20:19.79:376,20,0	1/1:10,4:16:22.89:407,23,0	1/1:3,0:3:3.01:60,3,0
chr10	53725825	.	G	GA	1528.93	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=-9.047;DP=562;FS=5.278;HRun=8;HaplotypeScore=55.0280;InbreedingCoeff=0.8455;MQ=63.68;MQ0=14;MQRankSum=1.751;QD=17.99;ReadPosRankSum=-1.366;VQSLOD=3.1360;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:37:96.04:0,96,879	0/0:12,0:12:33.02:0,33,302	0/1:10,0:10:11.21:11,0,135	0/0:13,0:10:23.93:0,24,210	0/0:22,0:22:60.03:0,60,549	0/0:21,0:21:51.02:0,51,467	0/0:21,0:20:44.84:0,45,403	1/1:6,16:21:47.25:521,47,0	0/0:17,0:17:51.03:0,51,467	0/0:18,0:17:39.02:0,39,357	0/0:23,0:23:54.03:0,54,494	0/0:16,0:16:45.02:0,45,412	0/0:13,0:12:30.01:0,30,274	0/0:16,0:15:39.02:0,39,357	0/0:13,0:12:27.01:0,27,247	0/0:17,0:15:32.99:0,33,298	1/1:4,28:32:69.20:794,69,0	1/1:8,13:18:30.80:351,31,0	0/0:22,0:21:60.03:0,60,548	0/0:27,0:26:75.04:0,75,686	0/0:20,0:19:48.03:0,48,439	0/0:26,0:24:60.03:0,60,549	0/0:18,0:18:48.02:0,48,439	0/0:18,0:18:48.03:0,48,439	0/0:16,0:16:42.02:0,42,384	0/0:27,0:26:66.03:0,66,604	0/0:19,0:19:51.02:0,51,466	0/0:24,0:24:62.99:0,63,566
chr10	53729087	.	C	CACACACAGAG	6618.59	PASS	AB=0.943;AC=24;AF=0.429;AN=56;BaseQRankSum=7.510;DP=801;FS=11.862;HRun=0;HaplotypeScore=252.4312;InbreedingCoeff=0.1059;MQ=50.63;MQ0=28;MQRankSum=-5.137;QD=14.08;ReadPosRankSum=3.595;VQSLOD=2.3022;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:59:99:0,143,3183	0/1:6,0:6:6.98:7,0,231	0/0:46,0:8:3.03:0,3,97	0/1:57,0:12:7.11:7,0,154	0/1:28,1:30:5.77:505,0,6	1/1:18,2:19:22.29:727,22,0	1/1:33,0:32:42.01:737,42,0	0/1:30,0:28:80.03:519,0,80	1/1:24,3:23:36.02:722,36,0	0/1:26,0:26:99:481,0,282	0/1:16,0:17:46.61:47,0,296	0/0:20,0:20:57.17:0,57,1300	0/0:26,0:26:71.57:0,72,1423	1/1:19,0:20:16.60:206,17,0	0/0:26,0:25:60.05:0,60,1139	0/0:32,0:31:75.07:0,75,1589	0/1:19,0:17:99:217,0,145	0/1:22,0:22:99:514,0,297	0/1:22,0:21:99:364,0,164	0/1:25,0:26:44.24:151,0,44	0/1:53,0:56:99:699,0,108	0/0:40,0:40:96.36:0,96,2452	0/0:21,0:21:54.16:0,54,1037	0/0:49,0:49:99:0,103,2595	1/1:2,13:19:3.01:153,3,0	0/1:18,0:23:99:355,0,185	0/0:10,0:11:10.50:0,10,127	1/1:5,0:7:18.04:208,18,0
chr10	53729108	.	GAC	G	972.14	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=1.440;DP=783;FS=0.000;HRun=0;HaplotypeScore=201.8421;InbreedingCoeff=0.9690;MQ=56.43;MQ0=17;MQRankSum=-3.001;QD=17.06;ReadPosRankSum=0.100;VQSLOD=3.4942;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:55,2:57:53.93:0,54,1778	0/0:5,0:5:9.03:0,9,150	0/0:58,0:18:26.89:0,27,379	0/0:65,0:16:26.19:0,26,282	0/0:23,0:23:41.71:0,42,680	0/0:20,0:20:39.08:0,39,620	0/0:35,0:35:56.68:0,57,881	1/1:12,14:25:48.13:582,48,0	0/0:24,0:23:48.10:0,48,709	0/0:27,1:28:26.19:0,26,897	0/0:23,0:23:48.15:0,48,764	0/0:22,0:22:45.11:0,45,705	0/0:26,0:26:69.18:0,69,1082	0/0:21,0:21:44.91:0,45,727	0/0:21,0:21:51.14:0,51,790	0/0:26,0:26:66.21:0,66,1063	1/1:10,8:16:23.56:272,24,0	1/1:7,5:12:20.04:259,20,0	0/0:22,0:22:54.12:0,54,797	0/0:21,0:21:54.18:0,54,890	0/0:61,0:60:69.32:0,69,1084	0/0:31,0:31:69.20:0,69,1091	0/0:21,0:21:54.15:0,54,844	0/0:43,0:43:90.74:0,91,1445	0/0:17,0:17:17.94:0,18,299	0/0:26,0:26:60.03:0,60,838	0/0:10,0:10:16.61:0,17,234	0/0:19,0:19:54.14:0,54,836
chr10	53729133	.	T	TCACA	13829.38	PASS	AB=0.990;AC=30;AF=0.536;AN=56;BaseQRankSum=3.441;DP=797;FS=5.459;HRun=0;HaplotypeScore=196.2097;InbreedingCoeff=0.8542;MQ=60.36;MQ0=7;MQRankSum=-5.104;QD=29.80;ReadPosRankSum=1.302;VQSLOD=4.5726;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:56:99:0,126,2074	0/0:5,0:5:12.04:0,12,201	0/1:46,0:26:43.03:43,0,324	0/1:49,0:29:13.59:14,0,459	1/1:7,17:26:36.12:887,36,0	1/1:8,14:23:48.16:1173,48,0	1/1:6,24:35:71.05:1461,71,0	0/0:17,0:32:54.37:0,54,470	1/1:7,20:27:59.21:1360,59,0	1/1:25,0:25:28.53:669,29,0	1/1:21,0:21:45.87:950,46,0	0/0:24,0:26:66.20:0,66,1032	0/0:30,0:30:72.22:0,72,1171	1/1:12,15:28:48.16:1174,48,0	0/0:28,0:28:78.25:0,78,1279	0/0:32,0:32:81.25:0,81,1303	0/0:5,0:17:38.02:0,38,327	0/0:5,0:14:24.03:0,24,224	1/1:23,0:24:30.33:655,30,0	1/1:22,0:22:25.16:775,25,0	1/1:54,0:53:49.61:1035,50,0	0/0:21,0:22:45.12:0,45,680	0/0:23,0:23:54.15:0,54,851	0/0:44,0:46:87.20:0,87,1312	1/1:11,6:17:24.07:513,24,0	1/1:26,0:27:57.92:1132,58,0	1/1:18,0:18:48.16:953,48,0	1/1:19,0:19:51.18:1035,51,0
chr10	53729150	.	C	CACAG	15494.85	PASS	AB=1.000;AC=25;AF=0.446;AN=56;BaseQRankSum=1.090;DP=846;FS=4.232;HRun=0;HaplotypeScore=192.2558;InbreedingCoeff=0.7538;MQ=62.94;MQ0=6;MQRankSum=-5.154;QD=39.94;ReadPosRankSum=2.979;VQSLOD=4.7452;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:57:99:0,159,2666	0/0:7,0:7:18.02:0,18,284	0/0:54,0:33:17.78:0,18,705	0/0:61,0:38:46.18:0,46,864	0/1:26,0:26:27.58:577,0,28	0/1:22,0:22:42.46:683,0,42	0/1:42,0:41:99:923,0,105	0/0:41,0:41:99:0,108,1100	1/1:26,0:26:36.73:953,37,0	1/1:2,18:24:68.96:1370,69,0	1/1:1,22:26:54.02:1359,54,0	0/0:25,0:25:72.19:0,72,1276	0/0:32,0:32:90.12:0,90,1481	1/1:23,0:23:24.11:775,24,0	0/0:29,0:29:84.25:0,84,1568	0/0:31,0:31:93.25:0,93,1664	0/0:19,0:17:42.03:0,42,456	0/0:12,0:12:29.98:0,30,332	1/1:1,26:28:80.91:1374,81,0	1/1:2,19:23:14.41:1082,14,0	1/1:4,47:59:57.09:1453,57,0	0/0:21,0:21:60.09:0,60,921	0/0:25,0:25:63.13:0,63,1074	0/0:44,0:44:99:0,105,1728	1/1:15,0:15:3.11:322,3,0	1/1:6,26:34:89.48:1892,89,0	1/1:0,17:19:48.16:1312,48,0	1/1:0,20:20:51.18:1419,51,0
chr10	53729205	.	GCACACACACACA	G	1320.30	PASS	AB=0.935;AC=18;AF=0.346;AN=52;BaseQRankSum=4.885;DP=645;FS=0.815;HRun=0;HaplotypeScore=234.8217;InbreedingCoeff=0.4599;MQ=59.04;MQ0=21;MQRankSum=-5.203;QD=5.77;ReadPosRankSum=-0.295;VQSLOD=2.6052;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:49:43:0,43,2033	0/0:9,0:9:9.03:0,9,435	./.	./.	0/0:17,0:17:18.06:0,18,362	0/0:18,0:22:7.05:0,7,160	0/0:28,0:29:6.01:0,6,121	0/1:21,0:21:7.09:8,0,7	0/0:11,0:17:13.63:0,14,327	1/1:20,2:21:5.80:65,6,0	1/1:8,1:8:2.70:25,3,0	0/0:24,0:25:33.11:0,33,1656	0/0:22,0:21:21.06:0,21,798	0/0:14,0:15:8.67:0,9,177	0/0:27,0:28:32.94:0,33,1587	0/0:30,0:32:30.10:0,30,1221	0/1:21,0:22:32.31:96,0,32	0/1:17,2:18:99:253,0,119	1/1:20,1:19:4.81:203,5,0	1/1:17,1:19:5.97:184,6,0	0/1:43,1:42:13.73:41,0,14	0/0:21,0:21:30.10:0,30,1186	0/0:17,0:17:18.06:0,18,774	0/0:40,0:40:37.48:0,37,1340	0/0:8,0:9:9.01:0,9,118	1/1:21,1:22:3.34:182,3,0	1/1:13,4:17:12.04:408,12,0	1/1:8,0:7:2.97:20,3,0
chr10	53730447	.	ACTT	A	1855.19	PASS	AB=0.992;AC=18;AF=0.321;AN=56;BaseQRankSum=-2.247;DP=467;FS=59.707;HRun=0;HaplotypeScore=79.1316;InbreedingCoeff=-0.2906;MQ=67.76;MQ0=1;MQRankSum=2.690;QD=6.92;ReadPosRankSum=-2.163;VQSLOD=-0.3522;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:67.95:0,68,760	0/0:10,0:10:2.64:0,3,53	0/0:24,0:12:15.19:0,15,154	0/0:15,0:11:2.71:0,3,60	0/1:21,0:20:24.90:177,0,25	0/1:10,0:10:55.78:56,0,88	0/1:19,0:18:64.69:116,0,65	0/1:36,6:39:99:588,0,118	0/1:6,0:6:16.70:45,0,17	0/1:17,0:17:56.64:141,0,57	1/1:13,0:13:11.82:105,12,0	0/0:16,0:16:41.99:0,42,526	0/0:12,0:12:30.09:0,30,490	0/1:7,0:7:11.96:12,0,80	0/0:16,0:16:39.02:0,39,477	0/0:18,0:18:38.64:0,39,394	0/1:14,0:13:94.99:95,0,115	0/1:16,0:16:99:134,0,140	0/1:13,0:13:82.60:83,0,91	0/1:21,0:20:70.05:178,0,70	0/1:8,0:8:4.12:47,0,4	0/0:17,0:16:38.05:0,38,547	0/0:19,0:19:33.35:0,33,412	0/0:20,0:20:42.58:0,43,625	0/1:16,0:14:1.85:2,0,107	0/1:23,0:23:52.21:52,0,99	0/1:18,0:18:64.04:164,0,64	0/1:4,0:4:16.09:20,0,16
chr10	53730452	.	TTC	T	2397.53	PASS	AB=0.986;AC=20;AF=0.357;AN=56;BaseQRankSum=1.000;DP=521;FS=67.400;HRun=0;HaplotypeScore=81.4113;InbreedingCoeff=-0.1034;MQ=60.20;MQ0=5;MQRankSum=-2.900;QD=7.40;ReadPosRankSum=-5.465;VQSLOD=-0.3941;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:71.36:0,71,664	0/0:9,0:9:8.39:0,8,91	0/0:24,0:12:16.49:0,16,146	0/0:13,0:8:1.33:0,1,46	1/1:30,0:29:34.82:313,35,0	0/1:14,0:14:61.61:72,0,62	0/1:20,0:19:31.38:147,0,31	0/1:35,0:31:89.32:458,0,89	0/1:12,0:11:3.60:47,0,4	0/1:25,0:24:22.69:186,0,23	1/1:19,0:19:19.83:155,20,0	0/0:16,0:16:41.97:0,42,411	0/0:13,0:13:31.30:0,31,383	0/1:9,0:9:14.88:15,0,76	0/0:14,0:14:39.68:0,40,397	0/0:17,0:17:23.32:0,23,305	0/1:16,1:15:82.06:166,0,82	0/1:15,3:18:99:273,0,121	0/1:13,0:13:72.62:106,0,73	0/1:29,0:28:19.56:224,0,20	0/1:8,0:8:7.33:66,0,7	0/0:17,0:16:40.56:0,41,450	0/0:18,1:19:17.67:0,18,319	0/0:19,0:19:42.32:0,42,469	0/1:18,0:16:13.72:50,0,14	0/1:25,0:25:65.73:78,0,66	0/1:22,0:22:61.31:174,0,61	1/1:10,0:8:2.72:37,3,0
chr10	53730557	.	CT	C	1081.01	PASS	AB=0.964;AC=8;AF=0.143;AN=56;BaseQRankSum=8.701;DP=493;FS=2.779;HRun=10;HaplotypeScore=75.5884;InbreedingCoeff=0.6164;MQ=73.43;MQ0=2;MQRankSum=-1.347;QD=10.20;ReadPosRankSum=2.435;VQSLOD=2.9419;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:42,1:46:90.62:0,91,1088	0/0:6,0:6:15.01:0,15,153	0/0:29,0:18:10.07:0,10,230	0/0:17,1:14:14.75:0,15,122	0/0:21,1:23:33.06:0,33,398	0/0:13,0:14:9.80:0,10,229	0/0:11,0:11:6.49:0,6,116	1/1:8,9:16:23.88:193,24,0	0/0:11,0:10:4.03:0,4,263	0/0:10,0:10:19.25:0,19,238	0/0:10,0:10:3.08:0,3,102	0/0:11,0:11:27.03:0,27,278	0/0:11,0:11:22.17:0,22,307	0/0:14,0:14:30.47:0,30,308	0/0:16,1:17:25.02:0,25,470	0/0:23,0:23:43.15:0,43,677	1/1:9,29:38:30.39:554,30,0	1/1:3,22:25:53.99:468,54,0	0/1:13,0:13:4.16:4,0,193	0/1:12,1:12:8.11:8,0,218	0/0:29,0:29:32.06:0,32,729	0/0:12,0:13:32.91:0,33,334	0/0:13,0:13:33.08:0,33,357	0/0:21,0:21:60.08:0,60,645	0/0:9,0:9:7.28:0,7,125	0/0:29,0:27:39.78:0,40,541	0/0:14,0:14:22.27:0,22,269	0/0:5,0:5:15.04:0,15,165
chr10	53732958	.	T	TAC	398.53	PASS	AB=1.000;AC=8;AF=0.143;AN=56;BaseQRankSum=6.782;DP=645;FS=0.000;HRun=0;HaplotypeScore=102.4890;InbreedingCoeff=0.5649;MQ=66.53;MQ0=6;MQRankSum=-4.310;QD=4.38;ReadPosRankSum=-1.340;VQSLOD=2.2068;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:11.05:0,11,394	0/0:9,0:9:24.04:0,24,259	0/0:30,0:23:26.58:0,27,236	0/0:33,0:18:24.36:0,24,250	0/0:40,0:39:90.02:0,90,895	0/0:25,0:25:54.04:0,54,561	0/0:16,0:16:39.01:0,39,379	1/1:24,4:24:27.32:251,27,0	0/0:20,0:20:49.45:0,49,531	0/0:29,0:29:72.12:0,72,748	0/0:24,0:24:57.03:0,57,566	0/0:14,0:14:36.03:0,36,381	0/0:14,0:14:30.01:0,30,287	0/0:19,0:19:42.06:0,42,449	0/0:25,0:25:1.68:0,2,441	0/0:22,0:22:48.04:0,48,491	1/1:9,1:10:2.03:110,2,0	1/1:5,2:7:9.01:119,9,0	0/0:21,0:20:44.90:0,45,406	0/0:28,0:28:60:0,60,588	0/0:22,0:21:36.10:0,36,429	0/0:35,0:35:96.13:0,96,1059	0/0:26,0:26:47.78:0,48,466	0/0:18,0:18:44.72:0,45,445	0/0:18,0:18:42.01:0,42,396	0/0:40,0:40:99:0,102,1117	0/1:18,0:18:20.29:20,0,220	0/1:28,0:28:37.62:38,0,336
chr10	53732992	.	GAGGAGAGAGA	G	1002.85	PASS	AB=0.975;AC=10;AF=0.179;AN=56;BaseQRankSum=3.861;DP=603;FS=8.034;HRun=0;HaplotypeScore=161.1794;InbreedingCoeff=-0.2200;MQ=47.19;MQ0=47;MQRankSum=-4.313;QD=4.62;ReadPosRankSum=-0.829;VQSLOD=1.9602;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:26:56.92:0,57,1314	0/0:11,0:11:29.33:0,29,505	0/0:19,0:2:3.01:0,3,38	0/0:29,0:5:10.57:0,11,108	0/0:32,0:31:51.16:0,51,1035	0/0:23,0:23:51.68:0,52,1026	0/1:18,0:13:11.56:12,0,270	0/1:36,0:28:29.46:29,0,67	0/0:23,0:23:43.66:0,44,963	0/1:29,0:27:99:103,0,367	0/1:22,0:19:2.81:3,0,327	0/0:14,0:14:29.89:0,30,433	0/1:12,0:12:99:152,0,102	0/0:26,0:23:17.06:0,17,583	0/0:22,0:22:33.15:0,33,944	0/0:22,0:21:30.57:0,31,920	0/1:11,0:11:46.09:59,0,46	0/0:7,0:7:14.83:0,15,161	0/1:15,0:11:99:157,0,213	0/0:18,1:18:25.02:0,25,327	0/0:27,0:23:41.51:0,42,543	0/0:28,0:28:49.21:0,49,1103	0/0:21,0:20:15.77:0,16,409	0/1:17,0:16:28.55:29,0,528	0/0:12,0:12:21.07:0,21,463	0/1:42,0:41:99:500,0,811	0/1:10,5:14:98.28:98,0,144	0/0:24,0:24:22.86:0,23,484
chr10	53732994	.	GGAGAGAGA	G	1487.50	PASS	AB=0.935;AC=17;AF=0.327;AN=52;BaseQRankSum=1.449;DP=584;FS=15.366;HRun=0;HaplotypeScore=138.4310;InbreedingCoeff=0.5174;MQ=46.26;MQ0=48;MQRankSum=-4.354;QD=6.82;ReadPosRankSum=-1.020;VQSLOD=1.4036;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:26:32.13:0,32,845	0/0:10,0:10:9.03:0,9,218	./.	./.	0/0:30,0:29:15.03:0,15,288	0/0:25,0:25:28.47:0,28,466	0/0:16,0:12:3.01:0,3,46	0/1:38,0:31:0.20:0,0,62	0/0:20,0:21:17.49:0,17,407	1/1:15,0:25:12.60:170,13,0	0/0:14,1:13:0.89:0,1,2	0/0:13,0:15:8.95:0,9,73	1/1:6,5:11:8.16:190,8,0	0/0:23,0:21:9.03:0,9,241	0/0:21,0:21:19.39:0,19,408	0/0:13,0:24:18.06:0,18,512	1/1:10,0:11:1.56:71,2,0	0/1:5,0:6:32.84:33,0,93	1/1:14,1:11:12:211,12,0	0/0:11,6:16:0:0,0,1	1/1:26,0:24:3.01:64,3,0	0/0:25,0:25:1.51:0,2,95	0/0:13,0:21:5.79:0,6,37	0/0:14,0:14:17.80:0,18,130	0/0:11,0:11:12.02:0,12,180	1/1:26,13:40:31.29:700,31,0	1/1:14,1:14:5.04:148,5,0	0/1:19,6:25:8.97:61,0,9
chr10	53733011	.	GA	G	250.61	PASS	AB=0.869;AC=3;AF=0.056;AN=54;BaseQRankSum=4.296;DP=668;FS=5.614;HRun=1;HaplotypeScore=109.3851;InbreedingCoeff=-0.0638;MQ=48.85;MQ0=35;MQRankSum=-6.294;QD=3.63;ReadPosRankSum=0.474;VQSLOD=0.2398;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:31:68.84:0,69,966	0/0:11,0:11:23.11:0,23,293	./.	0/0:21,0:3:5.81:0,6,34	0/0:33,0:32:42.12:0,42,529	0/0:34,0:34:65.51:0,66,841	0/0:15,0:11:18.06:0,18,220	0/1:35,8:36:99:258,0,729	0/0:23,0:23:54.54:0,55,696	0/0:25,0:23:55.79:0,56,595	0/0:22,0:19:45.09:0,45,546	0/0:20,0:20:38.61:0,39,464	0/0:15,0:15:29.88:0,30,329	0/0:26,0:23:38.90:0,39,486	0/0:27,0:26:54.17:0,54,700	0/0:36,0:35:63.19:0,63,845	0/1:9,4:13:59.36:59,0,104	0/1:13,0:11:32.57:33,0,186	0/0:15,0:11:26.09:0,26,314	0/0:27,0:26:45.57:0,46,550	0/0:37,0:33:53.85:0,54,681	0/0:22,0:22:50.20:0,50,563	0/0:21,0:20:22.31:0,22,269	0/0:18,0:18:38.78:0,39,462	0/0:19,0:19:30.07:0,30,354	0/0:45,0:44:99:0,109,1244	0/0:18,0:17:20.75:0,21,263	0/0:24,0:24:47.51:0,48,570
chr10	53733171	.	TACAC	T	542.46	PASS	AB=0.733;AC=3;AF=0.054;AN=56;BaseQRankSum=5.197;DP=970;FS=0.958;HRun=0;HaplotypeScore=287.8328;InbreedingCoeff=0.6456;MQ=58.19;MQ0=8;MQRankSum=-4.867;QD=14.28;ReadPosRankSum=-1.340;VQSLOD=2.8642;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:54:99:0,120,2841	0/0:10,0:10:30.10:0,30,710	0/0:44,0:20:39.05:0,39,728	0/0:46,0:27:58.89:0,59,1054	0/0:30,0:30:77.90:0,78,1677	0/0:34,0:34:57.41:0,57,1319	0/0:25,0:25:69.22:0,69,1585	0/0:59,0:59:99:0,135,2963	0/0:34,0:34:87.08:0,87,1946	0/0:42,0:42:99:0,117,2647	0/0:20,0:20:60.19:0,60,1444	0/0:26,0:26:63.17:0,63,1455	0/0:22,0:22:57.11:0,57,1170	0/0:33,0:31:68.72:0,69,1623	0/0:35,0:36:73.69:0,74,1398	0/0:41,0:39:99:0,100,2387	1/1:6,10:16:23.75:350,24,0	0/1:14,8:21:56.98:297,0,57	0/0:23,0:19:57.17:0,57,1223	0/0:35,0:35:87.30:0,87,2113	0/0:77,0:77:99:0,185,4279	0/0:36,0:36:99:0,99,2238	0/0:41,0:41:99:0,108,2311	0/0:39,0:39:88.66:0,89,2209	0/0:28,0:28:69.21:0,69,1604	0/0:36,0:36:93.30:0,93,2196	0/0:25,0:25:66.14:0,66,1404	0/0:34,0:34:93.24:0,93,2176
chr10	53733219	.	GACAC	G	1932.26	PASS	AB=0.667;AC=5;AF=0.089;AN=56;BaseQRankSum=6.371;DP=1010;FS=0.540;HRun=0;HaplotypeScore=222.3630;InbreedingCoeff=0.7786;MQ=55.37;MQ0=11;MQRankSum=-2.265;QD=19.72;ReadPosRankSum=-4.998;VQSLOD=2.2739;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:39:84.27:0,84,1984	0/0:13,0:13:36.11:0,36,825	0/0:49,0:18:21.07:0,21,445	0/0:49,0:25:29.21:0,29,757	0/0:41,0:45:99:0,125,2847	0/0:36,0:37:62.68:0,63,1384	0/0:30,0:29:63.19:0,63,1483	1/1:25,28:49:75.15:1028,75,0	0/0:35,0:37:95.76:0,96,2219	0/0:48,0:45:99:0,126,2893	0/0:23,0:26:65.96:0,66,1522	0/0:36,0:36:33.88:0,34,1864	0/0:18,1:21:53.65:0,54,1208	0/0:38,0:38:90.04:0,90,2125	0/0:40,0:44:99:0,105,2388	0/0:37,0:37:87.56:0,88,2072	1/1:2,20:23:42.89:704,43,0	0/1:11,11:21:99:329,0,176	0/0:17,0:16:33.11:0,33,804	0/0:35,0:36:74.99:0,75,1776	0/0:68,0:70:99:0,129,2688	0/0:33,0:35:92.76:0,93,2076	0/0:28,0:29:65.96:0,66,1574	0/0:30,0:35:63.04:0,63,1315	0/0:27,0:29:62.68:0,63,1412	0/0:34,0:36:98.54:0,99,2260	0/0:33,0:33:83.97:0,84,1958	0/0:35,0:37:90.21:0,90,2015
chr10	53733776	.	GA	G	1605.61	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.998;DP=631;FS=2.125;HRun=10;HaplotypeScore=59.4548;InbreedingCoeff=0.9869;MQ=74.73;MQ0=0;MQRankSum=-0.505;QD=19.34;ReadPosRankSum=-1.015;VQSLOD=4.1076;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:31:81:0,81,856	0/0:5,0:5:15.04:0,15,166	0/0:18,0:18:39.05:0,39,409	0/0:10,0:9:18.02:0,18,187	0/0:31,0:31:81.21:0,81,888	0/0:21,0:21:57.14:0,57,619	0/0:20,0:20:51.14:0,51,564	1/1:4,35:39:71.75:845,72,0	0/0:24,0:25:66.01:0,66,711	0/0:40,0:40:99:0,108,1183	0/0:22,0:22:60.16:0,60,664	0/0:21,0:21:60.13:0,60,641	0/0:17,0:17:39.09:0,39,418	0/0:12,0:12:33.09:0,33,365	0/0:29,0:29:75.19:0,75,821	0/0:15,1:16:19.10:0,19,429	1/1:4,22:26:26.80:462,27,0	1/1:1,17:18:50.10:441,50,0	0/0:17,1:18:23.32:0,23,474	0/0:20,0:22:56.97:0,57,601	0/0:26,0:26:75.20:0,75,830	0/0:29,0:29:75.19:0,75,820	0/0:25,0:25:63.16:0,63,690	0/0:12,0:12:27.07:0,27,299	0/0:17,1:18:25.08:0,25,500	0/0:28,0:28:66.04:0,66,704	0/0:33,0:32:84.17:0,84,908	0/0:19,0:19:42.11:0,42,457
chr10	53735367	.	GA	G	2654.08	PASS	AC=12;AF=0.222;AN=54;BaseQRankSum=10.419;DP=570;FS=8.990;HRun=8;HaplotypeScore=60.9244;InbreedingCoeff=0.9909;MQ=75.57;MQ0=0;MQRankSum=-0.512;QD=24.35;ReadPosRankSum=0.209;VQSLOD=4.0865;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,114,1360	0/0:7,0:7:15.05:0,15,181	0/0:19,0:19:24.07:0,24,325	0/0:12,0:12:23.87:0,24,246	1/1:2,31:33:90.14:869,90,0	1/1:0,11:11:33.05:319,33,0	1/1:0,10:10:27.04:261,27,0	0/0:32,0:31:72.19:0,72,840	1/1:1,7:8:18.03:174,18,0	0/0:22,0:22:63.19:0,63,761	0/0:20,0:20:45.14:0,45,544	0/0:27,0:27:72.22:0,72,869	0/0:13,0:13:30.09:0,30,362	1/1:2,9:11:27.04:261,27,0	0/0:29,0:29:69.21:0,69,834	0/0:19,0:19:51.16:0,51,616	0/0:29,0:29:72.22:0,72,870	0/0:40,1:41:88.38:0,88,1348	0/0:25,1:26:34.24:0,34,696	0/0:26,0:26:63.05:0,63,729	0/0:8,0:8:18.06:0,18,217	0/0:10,0:10:21.06:0,21,254	0/0:15,0:15:45.14:0,45,544	0/0:13,0:13:27.08:0,27,326	1/1:0,36:36:99:956,99,0	0/0:22,0:22:57.17:0,57,689	0/0:27,0:27:75.23:0,75,905	./.
chr10	53741969	.	TA	T	1008.10	PASS	AB=0.870;AC=8;AF=0.143;AN=56;BaseQRankSum=8.092;DP=733;FS=0.430;HRun=13;HaplotypeScore=75.6692;InbreedingCoeff=0.5759;MQ=73.74;MQ0=0;MQRankSum=1.327;QD=7.52;ReadPosRankSum=-0.945;VQSLOD=2.4770;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,2:31:12.87:0,13,405	0/0:11,0:11:24.04:0,24,234	0/0:19,0:18:19.84:0,20,133	0/0:16,0:15:6.56:0,7,98	0/1:34,6:40:47.47:47,0,532	0/0:23,0:26:50.25:0,50,509	0/1:16,3:20:20.71:21,0,291	1/1:7,29:36:83.41:604,83,0	0/0:25,0:25:57.06:0,57,539	0/0:38,1:39:41.13:0,41,544	0/0:14,0:14:36.05:0,36,346	0/0:30,0:30:54.07:0,54,515	0/0:30,2:32:16.25:0,16,467	0/0:19,0:19:39.05:0,39,374	0/0:39,0:41:83.59:0,84,928	0/0:30,4:37:2.41:0,2,653	1/1:3,14:18:37.83:269,38,0	1/1:8,12:20:29.80:219,30,0	0/0:20,2:22:7.07:0,7,366	0/0:26,1:29:55.94:0,56,662	0/0:29,0:29:57.08:0,57,548	0/0:18,0:19:41.83:0,42,374	0/0:30,0:30:48.63:0,49,484	0/0:20,0:20:42.07:0,42,409	0/0:28,3:31:18.38:0,18,650	0/0:33,2:35:37.37:0,37,674	0/0:24,3:27:0.37:0,0,483	0/0:15,0:15:33.04:0,33,313
chr10	53743313	.	AG	A	2376.23	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=12.150;DP=649;FS=1.642;HRun=1;HaplotypeScore=95.8662;InbreedingCoeff=0.9983;MQ=67.74;MQ0=0;MQRankSum=-8.598;QD=33.95;ReadPosRankSum=-2.836;VQSLOD=2.7161;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:93.32:0,93,1477	0/0:10,0:10:30.10:0,30,477	0/0:26,0:25:73.12:0,73,1086	0/0:21,0:21:60.20:0,60,927	0/0:13,0:13:39.13:0,39,623	0/0:23,0:23:69.24:0,69,1103	0/0:26,0:26:75.26:0,75,1198	1/1:0,28:28:84.25:1139,84,0	0/0:19,0:19:51.17:0,51,815	0/0:31,0:31:90.30:0,90,1419	0/0:15,0:15:42.13:0,42,646	0/0:46,0:46:99:0,138,2178	0/0:25,0:25:75.26:0,75,1194	0/0:15,0:15:45.15:0,45,719	0/0:23,0:23:69.24:0,69,1103	0/0:31,0:31:93.30:0,93,1461	1/1:0,21:21:57.19:794,57,0	1/1:0,21:20:42.14:586,42,0	0/0:13,0:13:39.13:0,39,624	0/0:29,0:29:87.30:0,87,1387	0/0:31,0:31:93.28:0,93,1439	0/0:21,0:21:60.20:0,60,959	0/0:24,0:24:69.20:0,69,1055	0/0:35,0:35:99:0,105,1655	0/0:17,0:17:51.17:0,51,815	0/0:24,0:24:69.21:0,69,1059	0/0:22,0:22:66.23:0,66,1055	0/0:7,0:7:21.04:0,21,304
chr10	53747176	.	CACAGAGAGAG	C	1574.32	PASS	AB=0.968;AC=17;AF=0.327;AN=52;BaseQRankSum=-4.200;DP=561;FS=29.174;HRun=0;HaplotypeScore=150.7850;InbreedingCoeff=-0.0546;MQ=44.89;MQ0=32;MQRankSum=4.677;QD=4.87;ReadPosRankSum=-0.904;VQSLOD=0.6973;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:37,0:33:46.71:47,0,850	1/1:16,0:16:26.23:333,26,0	./.	./.	1/1:33,0:32:23.94:164,24,0	0/0:18,0:14:3.40:0,3,308	0/1:24,0:23:68.33:221,0,68	0/0:27,0:25:21.86:0,22,120	0/1:17,0:15:18.59:19,0,298	0/0:25,0:23:57.40:0,57,1232	0/0:29,0:26:33.05:0,33,831	0/0:19,0:19:11.65:0,12,706	0/1:14,0:14:58.68:59,0,485	0/1:20,0:20:99:156,0,140	0/1:13,15:27:15.35:167,0,15	1/1:4,21:25:3.01:100,3,0	0/1:24,0:23:99:211,0,212	0/1:14,0:12:70.47:70,0,176	0/0:7,0:7:12.56:0,13,81	0/0:11,0:10:0.89:0,1,2	0/0:25,0:19:30.52:0,31,618	0/1:25,0:24:55.16:55,0,780	0/1:25,0:25:44.23:44,0,545	0/0:19,0:16:0.72:0,1,555	0/1:21,0:21:88.97:89,0,148	0/0:28,0:27:80.74:0,81,1636	0/0:16,0:16:38.90:0,39,665	0/0:14,0:11:29.97:0,30,453
chr10	53747178	.	CAG	C	651.21	PASS	AB=0.942;AC=24;AF=0.500;AN=48;BaseQRankSum=-0.788;DP=586;FS=13.674;HRun=0;HaplotypeScore=106.7336;InbreedingCoeff=0.6153;MQ=44.85;MQ0=34;MQRankSum=3.925;QD=2.13;ReadPosRankSum=0.793;VQSLOD=1.0588;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:33:0.07:0,0,142	1/1:16,0:16:8.54:50,9,0	./.	./.	0/1:23,10:32:0:0,0,0	1/1:20,0:16:23.89:183,24,0	1/1:23,2:24:13.93:108,14,0	./.	1/1:18,0:16:14.21:116,14,0	0/0:25,0:23:9.17:0,9,214	0/0:32,0:29:2.57:0,3,166	0/0:20,0:20:18.19:0,18,142	0/0:15,0:15:14.89:0,15,115	1/1:20,0:20:8.75:66,9,0	1/1:28,0:27:5.54:30,6,0	1/1:25,0:25:2.84:14,3,0	1/1:24,0:23:11.71:69,12,0	1/1:14,0:12:2.90:16,3,0	./.	0/1:13,0:12:0:0,0,0	0/1:27,0:21:6.42:6,0,88	0/0:27,0:26:26.92:0,27,215	0/0:23,0:23:14.97:0,15,122	0/1:20,0:17:3.62:4,0,72	1/1:22,0:22:20.87:155,21,0	0/0:29,0:28:44.62:0,45,332	0/0:22,0:22:18.27:0,18,107	0/0:14,0:11:10.18:0,10,67
chr10	53747955	.	C	CT	2996.41	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-11.955;DP=706;FS=32.768;HRun=3;HaplotypeScore=66.8823;InbreedingCoeff=0.9942;MQ=82.30;MQ0=0;MQRankSum=-0.584;QD=36.99;ReadPosRankSum=-3.606;VQSLOD=0.5958;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,147,1722	0/0:5,0:5:15.05:0,15,180	0/0:23,0:24:57.14:0,57,645	0/0:20,0:20:42.12:0,42,484	0/0:23,0:23:69.20:0,69,818	0/0:25,0:25:75.23:0,75,900	0/0:27,0:27:75.23:0,75,900	1/1:2,42:44:99:1711,126,0	0/0:22,0:22:57.17:0,57,684	0/0:28,0:28:81.24:0,81,964	0/0:20,0:20:57.11:0,57,666	0/0:32,0:32:96.29:0,96,1151	0/0:13,0:13:39.11:0,39,457	0/0:34,0:34:99:0,99,1164	0/0:23,0:23:63.19:0,63,756	0/0:38,0:38:99:0,108,1284	1/1:0,26:26:69.23:966,69,0	1/1:0,11:11:33.11:462,33,0	0/0:22,0:22:60.18:0,60,720	0/0:19,0:19:51.15:0,51,603	0/0:38,0:38:99:0,105,1248	0/0:22,0:22:60.17:0,60,708	0/0:14,0:14:39.12:0,39,467	0/0:33,0:33:90.28:0,90,1080	0/0:20,0:20:57.17:0,57,684	0/0:20,0:20:60.18:0,60,720	0/0:34,0:34:93.27:0,93,1103	0/0:18,0:18:51.16:0,51,610
chr10	53748636	.	T	TG	911.40	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=2.874;DP=537;FS=14.482;HRun=2;HaplotypeScore=91.1953;InbreedingCoeff=0.9439;MQ=62.95;MQ0=9;MQRankSum=-5.274;QD=17.20;ReadPosRankSum=0.228;VQSLOD=2.4863;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:39.62:0,40,373	0/0:6,0:6:11.77:0,12,114	0/0:44,0:18:14.67:0,15,196	0/0:38,0:12:11.59:0,12,105	0/0:15,0:15:17.07:0,17,182	0/0:19,0:19:41.76:0,42,388	0/0:17,0:17:44.46:0,44,328	1/1:20,6:26:71.51:542,72,0	0/0:20,0:20:41.30:0,41,318	0/0:24,0:23:59.76:0,60,528	0/0:15,0:15:41.42:0,41,310	0/0:16,0:16:27.89:0,28,231	0/0:16,0:15:40.40:0,40,333	0/0:15,0:15:20.90:0,21,168	0/0:28,0:28:59.52:0,60,457	0/0:19,0:19:22.13:0,22,326	1/1:10,1:13:20.86:225,21,0	1/1:11,2:14:37.31:287,37,0	0/0:14,0:13:30.49:0,30,251	0/0:19,0:19:51.39:0,51,390	0/0:9,0:9:17.98:0,18,161	0/0:20,0:17:39.81:0,40,326	0/0:17,1:17:10.25:0,10,265	0/0:18,0:18:43.71:0,44,464	0/0:12,0:12:23.57:0,24,186	0/0:22,0:21:43.05:0,43,348	0/0:31,0:30:62.55:0,63,484	0/0:10,0:10:27:0,27,242
chr10	53748656	.	GT	G	707.34	PASS	AB=0.889;AC=6;AF=0.107;AN=56;BaseQRankSum=9.104;DP=528;FS=21.158;HRun=17;HaplotypeScore=87.3220;InbreedingCoeff=0.5306;MQ=56.14;MQ0=14;MQRankSum=-6.203;QD=6.74;ReadPosRankSum=-1.180;VQSLOD=0.7220;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:47.93:0,48,533	0/0:4,0:4:5.83:0,6,83	0/0:37,0:13:4.45:0,4,186	0/1:45,0:13:9.19:9,0,86	0/0:19,0:18:39.03:0,39,321	0/0:22,0:22:44.69:0,45,501	0/0:14,1:15:10.79:0,11,244	1/1:4,14:31:62.67:532,63,0	0/0:13,0:13:24.82:0,25,222	0/0:24,1:23:63.23:0,63,727	0/0:16,0:16:45.10:0,45,520	0/0:14,0:14:28.07:0,28,294	0/0:15,0:14:38.76:0,39,484	0/0:15,0:15:2.95:0,3,169	0/0:24,0:23:50.57:0,51,533	0/0:18,0:18:37.46:0,37,441	0/1:10,4:14:19.49:111,0,19	1/1:7,7:14:25.53:188,26,0	0/0:14,0:12:24.32:0,24,295	0/0:16,0:16:42.08:0,42,477	0/0:9,0:9:18.52:0,19,214	0/0:16,0:15:30.17:0,30,353	0/0:15,0:14:26.09:0,26,413	0/0:20,0:20:57.54:0,58,732	0/0:15,0:15:28.85:0,29,300	0/0:27,0:25:48.79:0,49,574	0/0:28,0:27:24.13:0,24,379	0/0:9,0:7:18.05:0,18,208
chr10	53748661	.	GT	G	676.64	PASS	AB=0.938;AC=7;AF=0.125;AN=56;BaseQRankSum=7.005;DP=532;FS=10.923;HRun=4;HaplotypeScore=84.6213;InbreedingCoeff=0.4711;MQ=58.04;MQ0=13;MQRankSum=-3.788;QD=5.01;ReadPosRankSum=-0.975;VQSLOD=-0.6007;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:47.07:0,47,587	0/0:4,0:4:8.84:0,9,125	0/1:32,0:12:1.06:1,0,213	0/1:46,0:15:20.83:21,0,144	0/0:22,0:21:45.14:0,45,591	0/0:21,0:21:52.35:0,52,758	0/0:15,0:16:28.10:0,28,420	1/1:20,10:29:18.26:562,18,0	0/0:13,0:13:29.47:0,29,346	0/0:26,0:24:67.60:0,68,876	0/0:18,0:18:48.15:0,48,655	0/0:16,0:16:26.64:0,27,359	0/0:18,0:17:48.11:0,48,646	0/0:13,0:13:15.31:0,15,212	0/0:26,0:24:58.30:0,58,669	0/0:19,0:19:43.49:0,43,526	0/1:10,3:13:27.18:87,0,27	1/1:10,4:14:4.37:131,4,0	0/0:13,0:11:29:0,29,389	0/0:14,0:14:42.14:0,42,587	0/0:9,0:9:15.50:0,16,182	0/0:15,0:14:30.57:0,31,410	0/0:14,0:13:20.76:0,21,433	0/0:21,0:21:59.17:0,59,746	0/0:14,0:14:30.10:0,30,411	0/0:26,0:24:60.18:0,60,792	0/0:29,0:27:41.94:0,42,566	0/0:12,0:10:27.09:0,27,370
chr10	53748662	.	T	TTTG	821.35	PASS	AB=0.806;AC=3;AF=0.054;AN=56;BaseQRankSum=3.504;DP=540;FS=0.716;HRun=0;HaplotypeScore=107.7888;InbreedingCoeff=-0.0482;MQ=58.01;MQ0=13;MQRankSum=-3.264;QD=13.46;ReadPosRankSum=-0.068;VQSLOD=2.9257;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:49.91:0,50,731	0/0:4,0:4:9.03:0,9,143	0/0:31,0:12:14.88:0,15,277	0/0:45,0:15:28.32:0,28,297	0/0:22,0:21:45.15:0,45,716	0/0:21,0:21:56.98:0,57,968	0/0:16,0:16:5.98:0,6,540	0/1:30,0:29:23.09:708,0,23	0/0:13,0:13:29.89:0,30,452	0/0:26,0:24:68.09:0,68,1063	0/0:18,0:18:48.16:0,48,774	0/0:17,0:17:41.62:0,42,502	0/0:19,0:18:48.16:0,48,772	0/0:13,0:13:24.06:0,24,353	0/0:25,0:23:60.16:0,60,847	0/0:19,0:19:48.11:0,48,720	0/1:8,5:16:36.18:103,0,36	0/1:10,4:15:16.66:110,0,17	0/0:14,0:12:29.17:0,29,488	0/0:14,0:14:42.14:0,42,716	0/0:9,0:9:17.96:0,18,225	0/0:15,0:14:33.09:0,33,513	0/0:15,0:14:35.48:0,35,567	0/0:21,0:21:60.02:0,60,905	0/0:14,0:14:30.10:0,30,510	0/0:26,0:24:60.20:0,60,962	0/0:30,0:28:62.04:0,62,845	0/0:12,0:10:27.09:0,27,418
chr10	53748941	.	TACACAC	T	415.34	PASS	AB=0.939;AC=13;AF=0.260;AN=50;BaseQRankSum=4.794;DP=420;FS=1.384;HRun=0;HaplotypeScore=90.4303;InbreedingCoeff=0.4283;MQ=55.33;MQ0=8;MQRankSum=-3.195;QD=3.38;ReadPosRankSum=-0.086;VQSLOD=1.0801;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:25:27.09:0,27,479	0/0:4,0:4:3.01:0,3,96	./.	./.	1/1:9,3:12:6.44:81,6,0	1/1:13,7:20:9.03:181,9,0	1/1:16,4:20:2.91:17,3,0	0/0:22,0:20:2.98:0,3,21	0/0:11,0:11:3.01:0,3,57	0/0:11,0:11:2.03:0,2,24	0/0:9,0:11:2.99:0,3,25	0/0:9,0:9:12.04:0,12,369	0/0:18,0:17:27.06:0,27,639	1/1:7,0:7:3.01:43,3,0	0/0:5,0:5:6.02:0,6,135	./.	0/0:25,0:25:48.62:0,49,1219	0/0:19,0:20:46.65:0,47,1004	0/0:12,0:11:4.26:0,4,47	0/0:9,0:9:3:0,3,25	0/1:29,0:30:14.14:46,0,14	0/0:13,0:11:9.01:0,9,189	0/0:15,0:15:9.03:0,9,242	0/0:23,0:23:30.10:0,30,759	1/1:15,5:20:9.03:181,9,0	1/1:12,0:12:1.76:4,2,0	0/0:7,2:11:1.30:0,1,20	0/0:2,0:3:2:0,2,21
chr10	53749007	.	AG	A	714.69	PASS	AB=0.931;AC=8;AF=0.143;AN=56;BaseQRankSum=6.596;DP=451;FS=8.161;HRun=10;HaplotypeScore=61.1370;InbreedingCoeff=0.3977;MQ=69.63;MQ0=3;MQRankSum=-0.068;QD=7.44;ReadPosRankSum=2.271;VQSLOD=1.2842;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:29:53.91:0,54,541	0/0:7,0:7:15.03:0,15,157	0/0:24,0:16:1.06:0,1,190	0/0:25,0:12:14.90:0,15,123	0/0:16,0:17:23.48:0,23,245	0/1:13,0:13:3.94:4,0,118	0/0:16,1:17:15.87:0,16,368	0/1:14,3:17:47.68:48,0,186	0/0:16,0:16:35.67:0,36,366	0/1:12,2:14:2.92:3,0,230	0/0:9,0:9:3.34:0,3,115	0/0:17,1:18:13.15:0,13,336	0/0:12,0:12:33.04:0,33,335	0/0:18,0:18:32.88:0,33,299	0/0:12,0:13:32.91:0,33,337	0/0:16,0:16:33.09:0,33,364	1/1:13,14:27:53.90:452,54,0	1/1:6,13:19:38.99:338,39,0	0/0:16,2:17:18.06:0,18,373	0/1:6,0:6:4.46:4,0,120	0/0:27,0:27:31.22:0,31,459	0/0:6,0:6:18.03:0,18,183	0/0:13,0:13:7.65:0,8,260	0/0:16,0:16:39.07:0,39,413	0/0:10,0:10:14.97:0,15,150	0/0:1,0:13:26.54:0,27,177	0/0:17,0:17:24.03:0,24,290	0/0:5,0:14:23.13:0,23,150
chr10	53749223	.	T	TC	18296.66	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-12.099;DP=691;FS=0.597;HRun=0;HaplotypeScore=66.6478;InbreedingCoeff=0.9994;MQ=78.95;MQ0=0;MQRankSum=-4.376;QD=43.67;ReadPosRankSum=2.895;VQSLOD=5.3639;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,102,1385	0/0:7,0:7:21.07:0,21,294	0/0:25,0:24:66.18:0,66,866	0/0:20,0:20:56.99:0,57,706	1/1:0,20:20:60.14:928,60,0	1/1:0,21:21:57.13:881,57,0	1/1:1,22:23:60.20:957,60,0	1/1:1,37:38:99:1611,111,0	1/1:1,25:26:72.25:1150,72,0	1/1:3,25:28:72.24:1152,72,0	1/1:0,18:18:48.16:766,48,0	0/0:29,0:29:87.21:0,87,1159	0/0:31,0:31:93.29:0,93,1282	1/1:0,25:25:60.09:959,60,0	0/0:31,0:31:93.30:0,93,1284	0/0:27,0:27:81.26:0,81,1117	1/1:0,23:23:66.23:1054,66,0	1/1:0,12:12:33.11:527,33,0	1/1:0,22:22:66.17:963,66,0	1/1:0,22:22:62.77:995,63,0	1/1:0,25:25:72.25:1150,72,0	0/0:21,0:21:63.19:0,63,847	0/0:21,0:21:63.21:0,63,880	0/0:26,0:26:72.23:0,72,991	1/1:1,25:26:72.23:1127,72,0	1/1:1,24:25:72.24:1145,72,0	1/1:2,41:42:99:1973,126,0	1/1:0,22:22:60.20:959,60,0
chr10	53749719	.	C	CT	4320.29	PASS	AB=0.844;AC=28;AF=0.500;AN=56;BaseQRankSum=5.102;DP=622;FS=130.053;HRun=1;HaplotypeScore=66.8533;InbreedingCoeff=0.5730;MQ=45.18;MQ0=81;MQRankSum=-1.593;QD=13.80;ReadPosRankSum=-0.868;VQSLOD=1.1997;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:27:40.07:0,40,497	0/0:14,0:14:25.22:0,25,270	0/0:59,0:11:18.42:0,18,200	0/0:74,0:21:44.15:0,44,497	1/1:16,1:14:13.29:163,13,0	1/1:20,3:16:24.90:293,25,0	1/1:19,1:13:16.87:192,17,0	0/1:34,1:27:99:531,0,199	1/1:16,0:13:8.72:109,9,0	0/1:1,11:12:0.85:373,0,1	1/1:16,0:11:13.58:165,14,0	0/0:18,0:18:48.12:0,48,580	0/0:17,0:16:23.44:0,23,299	1/1:16,4:13:8.68:66,9,0	0/0:19,0:19:42.13:0,42,525	0/0:20,0:20:34.09:0,34,428	0/1:14,1:9:17.79:182,0,18	1/1:11,1:9:23.67:295,24,0	0/1:13,1:9:6.95:271,0,7	1/1:14,3:11:21.02:248,21,0	1/1:12,1:10:9.03:120,9,0	0/0:13,0:12:12.23:0,12,138	0/0:15,0:15:21.38:0,21,254	0/0:31,0:30:66.04:0,66,778	1/1:19,2:16:17.05:208,17,0	0/1:19,3:16:24.28:449,0,24	0/1:17,5:15:34.41:347,0,34	1/1:14,1:11:13.72:307,14,0
chr10	53749720	.	TC	T	4306.12	PASS	AB=0.692;AC=28;AF=0.500;AN=56;BaseQRankSum=5.867;DP=615;FS=110.690;HRun=1;HaplotypeScore=61.7576;InbreedingCoeff=0.5751;MQ=43.93;MQ0=82;MQRankSum=1.177;QD=13.85;ReadPosRankSum=0.309;VQSLOD=1.3546;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:27:42.61:0,43,530	0/0:14,0:14:24.74:0,25,259	0/0:57,0:10:18.42:0,18,200	0/0:71,0:20:44.33:0,44,498	1/1:10,7:14:13.29:163,13,0	1/1:8,16:16:24.90:293,25,0	1/1:11,9:13:16.79:169,17,0	0/1:10,25:27:99:531,0,199	1/1:5,11:13:8.98:109,9,0	0/1:12,0:12:0.86:354,0,1	1/1:6,10:11:13.58:165,14,0	0/0:19,0:19:48.07:0,48,588	0/0:17,0:16:29.44:0,29,340	1/1:12,9:13:8.68:66,9,0	0/0:19,0:19:48.13:0,48,578	0/0:20,0:20:37.33:0,37,472	0/1:8,7:9:20.90:218,0,21	1/1:4,8:9:23.39:308,23,0	0/1:6,8:9:6.87:282,0,7	1/1:8,9:11:21.02:248,21,0	1/1:5,8:9:9.03:120,9,0	0/0:13,0:12:15.25:0,15,178	0/0:14,0:14:21.38:0,21,265	0/0:30,0:29:75.53:0,76,890	1/1:13,8:16:17.06:208,17,0	0/1:7,15:16:24.28:449,0,24	0/1:11,12:15:49.04:315,0,49	1/1:3,10:9:13.72:307,14,0
chr10	53749721	.	CT	C	1503.75	PASS	AB=0.982;AC=28;AF=0.500;AN=56;BaseQRankSum=9.544;DP=615;FS=145.344;HRun=1;HaplotypeScore=72.3897;InbreedingCoeff=0.5198;MQ=44.01;MQ0=82;MQRankSum=1.153;QD=4.84;ReadPosRankSum=1.827;VQSLOD=0.4086;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:28:45.51:0,46,548	0/0:14,0:14:27.38:0,27,282	0/0:58,0:10:15.45:0,15,159	0/0:68,0:18:41.47:0,41,473	1/1:17,0:14:11.58:74,12,0	1/1:24,0:16:19.30:115,19,0	1/1:18,2:13:15.32:94,15,0	0/1:35,0:27:99:165,0,225	1/1:15,1:13:8.58:46,9,0	0/1:12,0:12:7.25:112,0,7	1/1:15,1:11:9.22:58,9,0	0/0:20,0:20:51.05:0,51,610	0/0:17,0:16:35.98:0,36,358	1/1:20,1:13:3.21:15,3,0	0/0:20,0:20:51.13:0,51,605	0/0:20,0:20:39.58:0,40,492	0/1:15,0:9:21.55:85,0,22	1/1:11,1:9:22.72:158,23,0	0/1:13,1:9:12.11:107,0,12	1/1:16,1:11:17.03:113,17,0	1/1:13,0:9:8.67:47,9,0	0/0:13,0:12:15.52:0,16,190	0/0:14,0:14:20.75:0,21,249	0/0:30,0:29:75.65:0,76,919	1/1:21,0:16:14.69:80,15,0	0/1:21,1:16:30.22:216,0,30	0/1:23,0:15:69.94:104,0,70	1/1:13,0:9:12.73:121,13,0
chr10	53749765	.	CTCTT	C	2985.47	PASS	AB=1.000;AC=37;AF=0.661;AN=56;BaseQRankSum=2.624;DP=442;FS=4.721;HRun=0;HaplotypeScore=94.0909;InbreedingCoeff=0.7144;MQ=53.84;MQ0=29;MQRankSum=-0.339;QD=10.70;ReadPosRankSum=1.136;VQSLOD=2.5383;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:24:29.78:0,30,354	0/0:10,0:9:11:0,11,128	0/1:19,0:6:2.53:3,0,74	0/0:42,0:18:24.55:0,25,229	1/1:8,3:10:14.98:123,15,0	1/1:7,2:8:23.89:188,24,0	1/1:19,1:17:31.65:241,32,0	1/1:28,0:26:77.70:635,78,0	1/1:12,3:14:26.92:219,27,0	1/1:9,3:12:29.27:244,29,0	1/1:8,4:12:20.66:162,21,0	0/0:24,0:24:34.55:0,35,491	0/1:23,0:22:5.28:5,0,305	1/1:11,1:10:9.67:87,10,0	0/0:20,0:21:50.32:0,50,452	0/0:19,0:19:41.78:0,42,377	1/1:12,2:12:24.01:201,24,0	1/1:3,0:2:6:67,6,0	1/1:14,1:13:35.88:314,36,0	1/1:5,3:7:8.99:75,9,0	1/1:10,0:7:11.94:96,12,0	0/0:11,0:11:1.69:0,2,152	0/0:10,0:10:16.05:0,16,204	0/1:29,0:28:89.50:90,0,393	1/1:10,2:11:11.83:100,12,0	1/1:11,0:8:20.88:163,21,0	1/1:11,0:10:14.74:109,15,0	1/1:4,1:4:8.93:65,9,0
chr10	53749767	.	CTT	C	3038.19	PASS	AB=1.000;AC=36;AF=0.643;AN=56;BaseQRankSum=2.659;DP=439;FS=3.887;HRun=3;HaplotypeScore=80.9351;InbreedingCoeff=0.7721;MQ=54.24;MQ0=27;MQRankSum=-0.497;QD=12.10;ReadPosRankSum=0.373;VQSLOD=0.4369;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:23:33.14:0,33,382	0/0:10,0:9:22.26:0,22,155	0/1:19,0:6:2.53:3,0,74	0/0:43,0:19:27.41:0,27,234	1/1:10,0:9:14.92:123,15,0	1/1:9,0:8:23.89:188,24,0	1/1:18,0:15:31.67:242,32,0	1/1:29,0:27:80.69:659,81,0	1/1:16,0:15:29.92:243,30,0	1/1:12,0:12:29.27:244,29,0	1/1:11,0:12:20.64:162,21,0	0/0:23,0:23:34.01:0,34,490	0/0:23,0:22:5.83:0,6,325	1/1:12,0:10:9.64:87,10,0	0/0:21,0:21:53.38:0,53,479	0/0:22,0:22:54.90:0,55,486	1/1:13,0:11:26.86:206,27,0	1/1:3,0:2:6:53,6,0	1/1:13,1:13:35.98:322,36,0	1/1:4,4:7:8.99:76,9,0	1/1:9,1:7:11.73:97,12,0	0/0:11,0:11:2.01:0,2,153	0/0:10,0:10:16.05:0,16,204	0/1:29,0:28:89.52:90,0,393	1/1:11,0:11:11.99:100,12,0	1/1:10,0:7:20.88:164,21,0	1/1:10,0:9:13.93:99,14,0	1/1:6,0:5:11.92:88,12,0
chr10	53749828	.	T	TC	6079.69	PASS	AB=0.598;AC=29;AF=0.518;AN=56;BaseQRankSum=18.724;DP=685;FS=0.000;HRun=1;HaplotypeScore=130.6919;InbreedingCoeff=0.6466;MQ=60.59;MQ0=0;MQRankSum=-3.795;QD=15.71;ReadPosRankSum=5.573;VQSLOD=4.9377;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:92.10:0,92,1391	0/0:14,0:14:39.10:0,39,525	0/0:18,0:15:39.12:0,39,519	0/0:28,0:26:75.21:0,75,970	1/1:10,16:26:23.39:356,23,0	1/1:6,18:24:21.82:437,22,0	1/1:10,18:28:19.05:415,19,0	1/1:12,22:32:15.56:496,16,0	1/1:3,17:20:26.57:378,27,0	0/1:9,15:25:14.59:433,0,15	1/1:4,20:25:38.21:443,38,0	0/0:32,0:32:96.32:0,96,1342	0/0:31,0:31:90.23:0,90,1198	1/1:7,15:22:23.33:331,23,0	0/0:27,0:27:81.27:0,81,1130	0/0:33,0:33:96.31:0,96,1325	0/1:9,17:26:22.72:299,0,23	1/1:5,13:18:27.60:291,28,0	1/1:5,5:9:12.45:173,12,0	1/1:4,17:21:40.20:412,40,0	0/1:5,12:17:16.58:230,0,17	0/0:24,0:24:72.24:0,72,1004	0/0:21,0:21:60.19:0,60,821	0/0:33,0:33:99:0,99,1364	1/1:8,18:26:7.45:319,7,0	1/1:4,17:20:14.62:419,15,0	0/1:6,12:18:3.73:271,0,4	0/1:8,18:26:44.65:378,0,45
chr10	53749829	.	T	TC	6331.27	PASS	AB=0.604;AC=30;AF=0.536;AN=56;BaseQRankSum=18.000;DP=687;FS=0.000;HRun=0;HaplotypeScore=128.9370;InbreedingCoeff=0.6713;MQ=60.54;MQ0=0;MQRankSum=-6.093;QD=16.19;ReadPosRankSum=4.699;VQSLOD=6.9154;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:92.05:0,92,1396	0/0:14,0:14:42.12:0,42,553	0/0:17,0:15:39.12:0,39,529	0/0:28,0:26:75.06:0,75,952	1/1:11,16:27:34.72:370,35,0	1/1:6,18:24:21.82:437,22,0	1/1:9,18:27:22.05:438,22,0	1/1:14,22:34:0.82:458,1,0	1/1:3,17:20:26.57:378,27,0	0/1:10,15:25:21.20:427,0,21	1/1:5,20:25:41.84:469,42,0	0/0:33,0:33:96.32:0,96,1340	0/0:30,0:30:84.25:0,84,1151	1/1:7,15:22:26.96:356,27,0	0/0:27,0:27:81.27:0,81,1132	0/0:32,0:32:96.31:0,96,1324	0/1:10,17:27:23.39:299,0,23	1/1:6,13:19:12.66:290,13,0	1/1:5,5:9:4:159,4,0	1/1:4,17:21:46.19:460,46,0	0/1:5,12:17:5.10:233,0,5	0/0:24,0:24:72.24:0,72,1004	0/0:22,0:22:60.19:0,60,821	0/0:33,0:33:99:0,99,1372	1/1:8,18:26:36.06:419,36,0	1/1:4,17:20:15.26:420,15,0	1/1:6,12:18:26.55:340,27,0	0/1:8,18:26:44.67:378,0,45
chr10	53750238	.	AAAC	A	12369.79	PASS	AB=0.950;AC=35;AF=0.625;AN=56;BaseQRankSum=14.661;DP=679;FS=2.317;HRun=0;HaplotypeScore=98.0641;InbreedingCoeff=0.9049;MQ=65.42;MQ0=1;MQRankSum=-1.934;QD=28.97;ReadPosRankSum=2.533;VQSLOD=5.2873;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:75.07:0,75,1431	0/0:5,0:5:9.03:0,9,184	0/1:18,1:16:16.09:16,0,391	0/0:16,0:16:18.06:0,18,351	1/1:0,34:34:78.26:1123,78,0	1/1:5,18:23:48.16:691,48,0	1/1:6,16:22:17.10:456,17,0	1/1:11,30:41:87.27:1214,87,0	1/1:5,17:22:42.14:604,42,0	1/1:2,25:27:72.21:993,72,0	1/1:4,18:22:51.17:724,51,0	0/0:34,0:34:84.27:0,84,1649	0/0:23,0:23:63.20:0,63,1224	1/1:2,25:27:60.20:863,60,0	0/0:35,0:35:87.30:0,87,1751	0/0:24,0:24:66.23:0,66,1328	1/1:2,17:19:8.42:608,8,0	1/1:3,14:17:39.13:561,39,0	1/1:9,11:20:33.11:474,33,0	1/1:3,13:16:36.12:518,36,0	1/1:6,14:20:30.10:432,30,0	0/0:30,0:30:75.24:0,75,1457	0/0:21,0:21:57.20:0,57,1155	0/0:30,0:30:72.25:0,72,1469	1/1:5,21:26:60.20:864,60,0	1/1:5,20:25:60.20:856,60,0	1/1:8,26:34:63.21:899,63,0	1/1:2,11:13:33.11:475,33,0
chr10	53751818	.	AAAAACAAAAC	A	15829.27	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=14.380;DP=569;FS=6.474;HRun=0;HaplotypeScore=170.9074;InbreedingCoeff=0.9865;MQ=63.94;MQ0=5;MQRankSum=-14.624;QD=52.41;ReadPosRankSum=1.537;VQSLOD=4.0819;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:78.25:0,78,3498	0/0:12,0:12:33.09:0,33,1310	0/0:31,0:14:29.78:0,30,1072	0/0:31,0:21:42.14:0,42,1423	1/1:4,11:15:27.09:830,27,0	1/1:2,24:26:60.21:1845,60,0	1/1:3,21:24:48.16:1476,48,0	1/1:9,20:29:60.09:1398,60,0	1/1:4,10:14:21.07:646,21,0	1/1:5,11:16:36.08:1032,36,0	1/1:3,12:15:30.10:887,30,0	0/0:26,0:26:66.23:0,66,3314	0/0:23,0:23:66.23:0,66,3242	1/1:4,12:16:21.07:646,21,0	0/0:23,0:23:60.21:0,60,2895	0/0:28,0:27:75.26:0,75,3551	1/1:3,18:21:24.08:738,24,0	1/1:4,5:9:12.04:369,12,0	1/1:10,15:25:45.11:1118,45,0	1/1:4,13:17:36.12:1106,36,0	1/1:6,7:13:12.04:334,12,0	0/0:17,0:17:48.16:0,48,2431	0/0:20,0:20:57.20:0,57,2772	0/0:29,0:29:84.29:0,84,4159	1/1:3,15:18:39.13:1195,39,0	1/1:6,13:19:39.12:1104,39,0	1/1:10,8:18:21.07:646,21,0	1/1:0,7:7:15.05:461,15,0
chr10	53753696	.	G	GA	1889.14	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-9.459;DP=765;FS=1.143;HRun=4;HaplotypeScore=70.0831;InbreedingCoeff=0.9998;MQ=87.69;MQ0=0;MQRankSum=-0.832;QD=35.64;ReadPosRankSum=1.191;VQSLOD=4.1327;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,135,1520	0/0:11,0:11:33.09:0,33,374	0/0:28,0:28:66.18:0,66,738	0/0:24,0:24:66.10:0,66,716	0/0:36,0:36:99:0,102,1157	0/0:26,0:26:75.20:0,75,840	0/0:28,0:28:84.21:0,84,940	0/0:39,0:39:99:0,102,1148	0/0:23,0:23:68.99:0,69,762	0/0:18,0:18:51.15:0,51,579	0/0:26,0:26:78.22:0,78,885	0/0:29,0:29:87.25:0,87,987	0/0:24,0:24:69.20:0,69,782	0/0:28,0:28:81.23:0,81,919	0/0:30,0:30:81.21:0,81,909	0/0:30,0:30:90.24:0,90,1011	1/1:0,29:29:87.29:1190,87,0	1/1:2,22:24:60.20:821,60,0	0/0:23,0:23:57.15:0,57,640	0/0:36,0:36:96.26:0,96,1079	0/0:38,0:38:99:0,108,1215	0/0:23,0:23:63.18:0,63,714	0/0:21,0:21:63.15:0,63,696	0/0:31,0:31:90.26:0,90,1020	0/0:22,0:22:60.17:0,60,681	0/0:29,0:29:75.21:0,75,851	0/0:29,0:29:81.23:0,81,919	0/0:13,0:13:36.10:0,36,408
chr10	53754833	.	CTGTT	C	16827.18	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=16.265;DP=776;FS=0.000;HRun=0;HaplotypeScore=132.0722;InbreedingCoeff=0.9908;MQ=82.75;MQ0=2;MQRankSum=-2.725;QD=36.98;ReadPosRankSum=2.472;VQSLOD=5.0587;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,138,3438	0/0:12,0:12:30.10:0,30,734	0/0:22,0:22:60.21:0,60,1448	0/0:26,0:25:54.18:0,54,1289	1/1:6,21:26:54.18:934,54,0	1/1:3,22:25:57.20:1004,57,0	1/1:4,23:27:54.18:951,54,0	1/1:11,24:35:72.21:1212,72,0	1/1:6,21:27:45.15:792,45,0	1/1:1,25:26:72.23:1224,72,0	1/1:4,11:15:27.09:454,27,0	0/0:41,0:41:99:0,108,2712	0/0:35,0:35:90.31:0,90,2189	1/1:5,24:29:60.20:1042,60,0	0/0:41,0:41:99:0,108,2651	0/0:25,1:26:10.19:0,10,1275	1/1:3,25:28:66.23:1164,66,0	1/1:4,20:24:42.14:737,42,0	1/1:3,20:22:57.14:917,57,0	1/1:5,33:38:90.31:1549,90,0	1/1:3,6:9:15.05:265,15,0	0/0:21,0:21:51.16:0,51,1143	0/0:26,0:26:69.24:0,69,1767	0/0:21,0:21:57.15:0,57,1398	1/1:7,13:20:27.09:477,27,0	1/1:5,27:32:78.23:1302,78,0	1/1:5,44:49:99:1853,105,0	1/1:1,20:20:54.18:952,54,0
chr10	53756527	.	GT	G	16869.71	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=17.257;DP=716;FS=0.599;HRun=2;HaplotypeScore=85.5052;InbreedingCoeff=0.9977;MQ=83.80;MQ0=0;MQRankSum=-4.686;QD=35.67;ReadPosRankSum=1.691;VQSLOD=5.3195;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:75.18:0,75,1057	0/0:10,0:10:30.10:0,30,450	0/0:25,0:25:69.21:0,69,1002	0/0:18,0:17:51.14:0,51,730	1/1:0,33:33:87.28:1130,87,0	1/1:0,29:29:84.27:1091,84,0	1/1:1,21:22:45.15:584,45,0	1/1:0,27:27:81.25:1037,81,0	1/1:1,22:23:15.23:695,15,0	1/1:0,31:31:93.28:1190,93,0	1/1:1,37:38:99:1402,108,0	0/0:17,0:17:51.16:0,51,744	0/0:33,0:33:96.33:0,96,1438	1/1:0,28:28:84.27:1090,84,0	0/0:27,0:27:81.27:0,81,1214	0/0:31,0:31:55.26:0,55,1311	1/1:0,24:24:63.20:818,63,0	1/1:0,18:18:42.14:542,42,0	1/1:0,26:26:78.24:999,78,0	1/1:0,40:40:99:1402,108,0	1/1:0,19:19:45.15:584,45,0	0/0:27,0:27:78.26:0,78,1169	0/0:19,0:19:54.18:0,54,809	0/0:11,0:11:33.11:0,33,495	1/1:0,22:22:66.21:857,66,0	1/1:1,36:37:99:1387,108,0	1/1:0,43:43:99:1557,120,0	1/1:0,13:13:39.13:506,39,0
chr10	53759745	.	A	AT	13217.89	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-14.383;DP=706;FS=7.997;HRun=7;HaplotypeScore=62.9936;InbreedingCoeff=0.9993;MQ=73.96;MQ0=0;MQRankSum=-1.555;QD=30.74;ReadPosRankSum=0.225;VQSLOD=4.9981;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:96.12:0,96,916	0/0:11,0:11:30.05:0,30,289	0/0:18,0:18:30.04:0,30,288	0/0:18,0:18:22.41:0,22,269	1/1:2,35:37:99:1286,108,0	1/1:4,30:34:81.25:979,81,0	1/1:1,24:25:66.20:797,66,0	1/1:6,20:26:60.18:725,60,0	1/1:3,25:28:75.23:906,75,0	1/1:3,28:31:87.24:1037,87,0	1/1:7,21:28:60.18:725,60,0	0/0:30,0:31:74.12:0,74,690	0/0:26,0:26:75.12:0,75,724	1/1:1,16:17:45.14:544,45,0	0/0:27,0:27:69.08:0,69,661	0/0:32,0:32:84.11:0,84,806	1/1:1,35:36:99:1268,105,0	1/1:3,13:16:33.10:399,33,0	1/1:4,17:21:51.14:604,51,0	1/1:2,16:18:48.15:580,48,0	1/1:4,14:18:39.12:471,39,0	0/0:32,0:32:90.14:0,90,869	0/0:29,0:29:81.12:0,81,782	0/0:17,0:17:51.08:0,51,492	1/1:2,22:24:60.18:725,60,0	1/1:2,22:24:66.16:763,66,0	1/1:4,30:34:64.30:1048,64,0	1/1:1,12:13:30.09:362,30,0
chr10	53764176	.	ATGT	A	18845.92	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=15.366;DP=803;FS=7.006;HRun=0;HaplotypeScore=127.2326;InbreedingCoeff=0.9998;MQ=83.58;MQ0=0;MQRankSum=-4.226;QD=40.36;ReadPosRankSum=1.723;VQSLOD=6.3351;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,148,3312	0/0:11,0:11:27.09:0,27,612	0/0:29,0:29:78.23:0,78,1683	0/0:27,0:27:78.20:0,78,1598	1/1:2,33:35:75.26:1250,75,0	1/1:0,26:26:57.19:949,57,0	1/1:0,22:22:57.19:949,57,0	1/1:5,22:27:66.18:1020,66,0	1/1:1,18:19:45.15:750,45,0	1/1:3,30:33:90.27:1447,90,0	1/1:0,26:26:63.13:989,63,0	0/0:32,0:32:93.32:0,93,2108	0/0:26,0:26:78.27:0,78,1768	1/1:1,30:32:78.27:1299,78,0	0/0:39,0:39:99:0,114,2499	0/0:31,0:31:87.30:0,87,1954	1/1:0,31:31:75.26:1250,75,0	1/1:3,23:26:63.22:1048,63,0	1/1:5,15:20:45.15:749,45,0	1/1:1,19:20:42.10:669,42,0	1/1:2,64:66:99:2750,166,0	0/0:24,0:24:66.23:0,66,1496	0/0:24,0:24:69.24:0,69,1554	0/0:42,0:42:99:0,126,2852	1/1:1,17:18:39.13:650,39,0	1/1:1,27:28:81.25:1309,81,0	1/1:3,20:23:63.22:1048,63,0	1/1:0,15:15:45.11:720,45,0
chr10	53766993	.	T	TAA	21290.60	PASS	AB=0.955;AC=35;AF=0.625;AN=56;BaseQRankSum=-16.433;DP=624;FS=3.635;HRun=1;HaplotypeScore=61.6694;InbreedingCoeff=0.9209;MQ=80.43;MQ0=1;MQRankSum=-2.169;QD=49.40;ReadPosRankSum=-1.130;VQSLOD=4.4566;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:69.21:0,69,1028	0/0:9,0:9:27.09:0,27,414	0/0:11,0:11:33.10:0,33,484	0/0:20,0:20:41.97:0,42,599	1/1:0,24:23:72.17:1293,72,0	1/1:0,26:26:69.24:1333,69,0	1/1:2,15:18:42.14:808,42,0	1/1:2,35:37:99:1954,108,0	1/1:1,9:10:24.08:464,24,0	1/1:4,38:42:99:2321,123,0	1/1:2,24:26:72.20:1348,72,0	0/0:20,0:20:60.20:0,60,919	0/0:23,0:23:66.22:0,66,1009	1/1:1,17:18:51.13:948,51,0	0/0:33,0:33:96.33:0,96,1469	0/1:20,1:21:15.75:16,0,810	1/1:1,23:24:55.48:1099,55,0	1/1:1,13:14:36.12:696,36,0	1/1:1,18:20:60.18:1067,60,0	1/1:1,25:26:75.22:1412,75,0	1/1:2,28:30:78.27:1507,78,0	0/0:11,0:11:33.11:0,33,505	0/0:26,0:26:78.25:0,78,1172	0/0:17,0:17:51.17:0,51,777	1/1:0,21:20:54.19:1044,54,0	1/1:1,28:29:84.29:1612,84,0	1/1:0,40:40:99:2140,111,0	1/1:0,4:5:12.04:232,12,0
chr10	53768541	.	GA	G	1623.05	PASS	AB=0.757;AC=20;AF=0.357;AN=56;BaseQRankSum=-1.485;DP=664;FS=10.805;HRun=16;HaplotypeScore=85.8648;InbreedingCoeff=0.1779;MQ=75.57;MQ0=5;MQRankSum=-0.450;QD=4.41;ReadPosRankSum=2.983;VQSLOD=0.8696;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:21,6:27:18.31:18,0,161	0/0:8,0:9:17.10:0,17,117	0/1:40,0:25:16.42:16,0,101	0/0:26,0:19:7.94:0,8,31	0/0:25,0:33:61.76:0,62,366	0/0:22,1:28:29.80:0,30,231	0/0:14,0:22:47.99:0,48,265	0/0:28,1:29:10.49:0,10,267	0/0:5,1:20:8.01:0,8,115	1/1:9,9:18:7.72:110,8,0	0/1:16,15:32:71.54:146,0,72	0/0:23,1:25:39.44:0,39,291	0/0:25,0:24:41.20:0,41,320	0/0:4,0:16:11.67:0,12,78	0/1:11,12:23:57.44:138,0,57	1/1:12,11:25:13.62:191,14,0	0/1:16,15:32:4.88:292,0,5	1/1:17,9:27:22.25:225,22,0	0/1:13,3:16:24.04:24,0,39	0/1:22,9:31:13.93:151,0,14	0/1:8,0:10:12.79:13,0,40	1/1:7,10:19:8.35:144,8,0	0/0:15,0:16:24.33:0,24,186	0/0:25,2:27:22.98:0,23,349	0/0:8,0:18:17.21:0,17,98	1/1:8,11:22:5.14:113,5,0	0/1:15,13:28:90.86:181,0,91	0/1:7,6:13:13.54:42,0,14
chr10	53768921	.	T	TA	11839.77	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-14.842;DP=541;FS=21.274;HRun=5;HaplotypeScore=46.1641;InbreedingCoeff=0.9779;MQ=74.83;MQ0=0;MQRankSum=-0.966;QD=34.12;ReadPosRankSum=-0.192;VQSLOD=2.7133;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,102,1085	0/0:10,0:10:27.07:0,27,290	0/0:10,0:10:29.91:0,30,303	0/0:11,0:11:3.92:0,4,226	1/1:6,23:29:60.15:770,60,0	1/1:1,16:17:45.15:592,45,0	1/1:3,16:19:40.01:515,40,0	1/1:3,22:25:66.20:852,66,0	1/1:4,17:21:45.15:592,45,0	1/1:1,17:18:51.17:669,51,0	1/1:0,23:23:63.20:829,63,0	0/0:13,0:13:36.09:0,36,386	0/0:25,0:25:69.15:0,69,731	1/1:0,22:22:63.20:828,63,0	0/0:26,0:26:72.18:0,72,774	0/0:22,0:22:63.16:0,63,677	1/1:0,25:25:66.21:868,66,0	1/1:1,19:20:54.18:711,54,0	1/1:0,14:14:36.12:471,36,0	1/1:1,22:23:66.21:868,66,0	1/1:2,16:18:45.15:592,45,0	0/0:13,0:13:39.10:0,39,419	0/0:18,0:18:48.10:0,48,506	0/0:11,0:11:30.05:0,30,312	1/1:2,18:20:51.17:671,51,0	1/1:1,17:18:51.17:671,51,0	1/1:1,24:25:72.23:945,72,0	1/1:0,10:10:30.10:395,30,0
chr10	53771879	.	G	GCCAGCTGAATGTCCCGAA	38993.75	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-3.893;DP=767;FS=9.365;HRun=0;HaplotypeScore=247.1991;InbreedingCoeff=0.9336;MQ=84.88;MQ0=0;MQRankSum=-16.479;QD=83.86;ReadPosRankSum=-1.284;VQSLOD=2.6033;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,114,4411	0/0:11,0:11:33.11:0,33,1609	0/0:37,0:37:93.28:0,93,3295	0/0:25,0:25:57.15:0,57,2029	1/1:0,6:22:26.95:1157,27,0	1/1:2,4:25:12.04:972,12,0	1/1:0,2:32:6.02:521,6,0	1/1:54,0:54:99:8331,150,0	1/1:1,15:30:48.16:4165,48,0	1/1:2,2:29:66.97:3648,67,0	1/1:4,3:17:12.04:1028,12,0	0/0:35,0:35:99:0,102,4578	0/0:23,0:23:66.20:0,66,3095	1/1:0,10:29:30.10:2121,30,0	0/0:32,0:32:87.28:0,87,4082	0/0:33,0:33:96.32:0,96,4507	1/1:0,4:18:12.04:1043,12,0	1/1:3,2:24:6.02:523,6,0	1/1:2,3:26:75.08:3479,75,0	1/1:1,10:38:39.03:2590,39,0	1/1:5,1:27:6.02:521,6,0	0/0:18,0:18:48.15:0,48,2181	0/0:17,0:17:45.12:0,45,1779	0/0:32,0:32:90.27:0,90,3996	1/1:1,4:35:12.04:1043,12,0	1/1:1,6:27:69.17:4395,69,0	1/1:2,11:28:36.12:2748,36,0	1/1:4,0:4:12.02:709,12,0
chr10	53772413	.	CTG	C	12325.15	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=13.620;DP=635;FS=1.289;HRun=0;HaplotypeScore=78.0775;InbreedingCoeff=0.9955;MQ=84.79;MQ0=3;MQRankSum=-1.900;QD=38.76;ReadPosRankSum=2.456;VQSLOD=7.0943;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:51.17:0,51,934	0/0:4,0:4:12.01:0,12,158	0/0:29,0:29:81.27:0,81,1433	0/0:15,0:15:45.15:0,45,769	1/1:1,31:32:93.31:1332,93,0	1/1:2,30:30:81.27:1161,81,0	1/1:0,9:9:24.08:344,24,0	0/0:39,0:39:99:0,114,1996	1/1:1,18:18:48.16:688,48,0	1/1:1,17:18:51.16:713,51,0	1/1:1,22:23:63.17:880,63,0	0/0:26,0:26:75.24:0,75,1334	0/0:28,0:28:84.23:0,84,1444	1/1:0,25:25:66.22:945,66,0	0/0:22,0:22:60.19:0,60,1069	0/0:25,0:25:75.24:0,75,1341	0/0:29,0:29:78.27:0,78,1428	0/0:18,0:18:51.17:0,51,913	1/1:1,31:32:93.28:1293,93,0	1/1:1,21:22:63.14:858,63,0	1/1:0,14:14:42.14:602,42,0	0/0:17,0:17:51.16:0,51,905	0/0:33,0:33:99:0,99,1783	0/0:14,0:14:42.13:0,42,728	1/1:2,21:23:57.19:817,57,0	1/1:2,25:27:75.19:1017,75,0	1/1:0,26:26:75.25:1074,75,0	1/1:0,16:16:42.14:602,42,0
chr10	53773054	.	A	AGGGTGTG	12219.37	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-0.871;DP=567;FS=3.467;HRun=0;HaplotypeScore=142.0561;InbreedingCoeff=0.9705;MQ=79.72;MQ0=0;MQRankSum=-11.164;QD=39.16;ReadPosRankSum=-3.606;VQSLOD=3.9413;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:37:90.26:0,90,2103	0/0:13,0:13:33.07:0,33,748	0/0:25,0:22:12.59:0,13,827	0/0:32,0:29:75.05:0,75,1296	1/1:3,5:17:14.97:400,15,0	1/1:6,2:22:13.82:515,14,0	1/1:5,1:21:30.06:892,30,0	1/1:11,0:11:24.43:282,24,0	1/1:5,2:18:36.12:1164,36,0	1/1:4,8:15:38.91:964,39,0	1/1:3,3:10:12.04:377,12,0	0/0:20,0:20:60.19:0,60,1500	0/0:25,0:25:72.21:0,72,1577	1/1:5,1:19:9.50:300,9,0	0/0:23,0:23:60.21:0,60,1524	0/0:21,0:21:60.20:0,60,1525	1/1:6,13:25:13.11:997,13,0	1/1:3,7:15:24.55:832,25,0	1/1:7,9:21:47.98:1264,48,0	1/1:2,5:16:27.09:965,27,0	1/1:12,13:33:15.05:567,15,0	0/0:18,0:18:45.15:0,45,1099	0/0:19,0:20:57.20:0,57,1454	0/0:18,0:20:48.16:0,48,1176	1/1:4,1:23:18.06:544,18,0	1/1:3,7:16:39.02:803,39,0	1/1:4,12:19:26.75:890,27,0	1/1:10,0:10:21.06:463,21,0
chr10	53773057	.	G	GTGT	4401.80	PASS	AB=0.962;AC=21;AF=0.375;AN=56;BaseQRankSum=11.237;DP=471;FS=0.000;HRun=0;HaplotypeScore=120.0273;InbreedingCoeff=0.1160;MQ=85.04;MQ0=0;MQRankSum=-13.132;QD=19.83;ReadPosRankSum=0.688;VQSLOD=4.7372;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:93.30:0,93,1654	0/0:13,0:13:39.13:0,39,687	0/0:28,0:24:50.52:0,51,759	0/0:33,0:30:76.98:0,77,1109	0/1:10,0:10:29.05:114,0,29	0/1:13,0:13:10.10:202,0,10	0/1:18,0:18:6.92:302,0,7	0/1:5,3:10:29.79:183,0,30	1/1:14,0:14:36.06:442,36,0	0/1:13,0:13:21.85:288,0,22	0/1:10,0:10:2.22:133,0,2	0/0:21,0:21:63.21:0,63,1145	0/0:25,0:25:62.28:0,62,1253	0/1:8,2:10:12.34:95,0,12	0/0:20,0:20:60.21:0,60,1114	0/0:21,0:21:63.22:0,63,1163	0/1:19,0:19:92.77:311,0,93	1/1:9,0:9:21.06:289,21,0	0/1:16,0:16:3.72:393,0,4	0/1:14,0:14:25.47:304,0,25	1/1:18,0:19:15.04:192,15,0	0/0:17,0:17:48.15:0,48,846	0/0:19,0:19:57.19:0,57,1039	0/0:17,0:17:48.16:0,48,841	0/1:14,0:14:5.93:217,0,6	0/1:12,0:12:63.41:260,0,63	0/1:14,0:13:21.52:263,0,22	1/1:7,0:7:21.07:413,21,0
chr10	53773709	.	GA	G	3522.76	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=18.021;DP=733;FS=0.569;HRun=2;HaplotypeScore=150.1461;InbreedingCoeff=0.9819;MQ=67.76;MQ0=2;MQRankSum=1.555;QD=8.27;ReadPosRankSum=-0.215;VQSLOD=0.8395;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:67.95:0,68,1466	0/0:8,0:8:21.07:0,21,320	0/0:39,0:27:75.14:0,75,1069	0/0:27,2:19:30.40:0,30,584	1/1:25,1:26:23.88:200,24,0	1/1:24,0:24:45.38:201,45,0	1/1:24,0:24:41.90:216,42,0	1/1:33,0:32:51.13:306,51,0	1/1:24,0:24:22.44:115,22,0	1/1:21,0:21:51.62:236,52,0	1/1:22,0:22:53.01:191,53,0	0/0:27,0:27:78.13:0,78,1218	0/0:30,0:30:90.30:0,90,1391	1/1:22,0:22:51:187,51,0	0/0:40,0:39:99:0,117,1690	0/0:33,0:33:99:0,99,1478	1/1:28,0:28:47.68:221,48,0	1/1:27,0:27:39.09:191,39,0	1/1:15,0:14:5.41:117,5,0	1/1:24,0:24:41.83:188,42,0	1/1:31,1:32:69.54:301,70,0	0/0:18,0:18:54.17:0,54,811	0/0:15,0:15:45.14:0,45,682	0/0:31,0:31:92.80:0,93,1401	1/1:24,0:24:49.04:198,49,0	1/1:27,0:27:34.09:275,34,0	1/1:33,0:33:40.42:265,40,0	1/1:20,0:20:37.35:117,37,0
chr10	53773924	.	A	AG	17235.37	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-16.835;DP=790;FS=2.281;HRun=4;HaplotypeScore=69.7888;InbreedingCoeff=0.9884;MQ=84.25;MQ0=0;MQRankSum=-4.648;QD=35.98;ReadPosRankSum=1.400;VQSLOD=5.3082;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,120,1360	0/0:10,0:10:30.09:0,30,340	0/0:21,0:21:51.14:0,51,578	0/0:25,0:25:48.14:0,48,716	1/1:2,27:29:78.19:1043,78,0	1/1:2,14:16:39.13:533,39,0	1/1:2,31:32:84.28:1149,84,0	1/1:1,23:24:66.16:850,66,0	1/1:0,31:31:87.29:1190,87,0	1/1:1,25:26:75.19:972,75,0	1/1:2,18:20:51.17:692,51,0	0/0:36,0:36:99:0,99,1096	0/0:32,0:32:81.21:0,81,903	1/1:1,33:34:90.30:1229,90,0	0/0:31,0:31:87.23:0,87,974	0/0:33,2:35:58.20:0,58,1010	1/1:4,41:45:99:1559,114,0	1/1:6,29:35:41.30:948,41,0	1/1:1,21:22:63.16:813,63,0	1/1:1,27:28:81.27:1103,81,0	1/1:4,42:46:99:1858,138,0	0/0:23,0:23:63.18:0,63,713	0/0:22,0:22:60.14:0,60,663	0/0:28,0:28:81.19:0,81,904	1/1:3,20:23:60.16:786,60,0	1/1:3,28:31:87.29:1179,87,0	1/1:1,26:27:78.26:1065,78,0	1/1:3,6:9:7.41:265,7,0
chr10	53774066	.	TG	T	14411.12	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=12.792;DP=730;FS=1.967;HRun=4;HaplotypeScore=71.6687;InbreedingCoeff=0.9971;MQ=77.24;MQ0=0;MQRankSum=-3.067;QD=31.88;ReadPosRankSum=-1.350;VQSLOD=4.8580;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:43:99:0,129,1771	0/0:9,0:9:27.09:0,27,378	0/0:13,0:13:36.11:0,36,489	0/0:16,0:16:47.75:0,48,639	1/1:0,16:16:42.09:488,42,0	1/1:0,18:18:51.16:612,51,0	1/1:2,33:35:96.29:1152,96,0	1/1:2,24:26:72.21:854,72,0	1/1:1,19:20:54.17:648,54,0	1/1:1,18:19:51.14:599,51,0	1/1:1,9:10:27.08:321,27,0	0/0:36,0:36:96.32:0,96,1344	0/0:37,0:37:99:0,105,1467	1/1:2,42:44:99:1295,108,0	0/0:26,0:26:78.26:0,78,1092	0/0:32,1:33:60.29:0,60,1233	1/1:2,37:39:99:1224,102,0	1/1:0,31:31:87.27:1044,87,0	1/1:0,18:18:51.16:612,51,0	1/1:2,16:18:48.10:559,48,0	1/1:2,86:88:99:2700,226,0	0/0:17,0:17:48.16:0,48,672	0/0:8,0:8:24.05:0,24,300	0/0:39,0:39:99:0,111,1549	1/1:1,17:18:48.15:576,48,0	1/1:1,26:27:72.22:864,72,0	1/1:0,20:20:57.17:684,57,0	1/1:0,5:5:15.05:180,15,0
chr10	53774454	.	A	AT	8874.73	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=2.384;DP=556;FS=3.857;HRun=8;HaplotypeScore=69.0887;InbreedingCoeff=0.9977;MQ=73.97;MQ0=0;MQRankSum=-0.881;QD=29.78;ReadPosRankSum=1.908;VQSLOD=4.8462;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:42.02:0,42,384	0/0:12,0:12:30.01:0,30,274	0/0:16,0:15:21.07:0,21,175	0/0:10,0:10:18.19:0,18,235	1/1:3,23:26:66.20:762,66,0	1/1:0,26:26:72.21:831,72,0	1/1:2,14:16:42.07:469,42,0	0/0:37,0:37:99:0,99,898	1/1:2,22:24:60.18:692,60,0	1/1:6,19:24:60.18:690,60,0	1/1:2,10:12:33.07:367,33,0	0/0:28,0:28:78.03:0,78,713	0/0:12,0:12:33.01:0,33,302	1/1:2,18:20:51.15:589,51,0	0/0:22,0:22:32.46:0,32,465	0/0:15,0:15:45.02:0,45,412	0/0:20,0:20:54.02:0,54,494	0/0:29,0:29:78.04:0,78,714	1/1:1,11:13:35.94:395,36,0	1/1:1,17:19:53.99:603,54,0	1/1:1,14:15:42.12:485,42,0	0/0:19,0:19:54.03:0,54,494	0/0:10,0:10:27.01:0,27,247	0/0:9,0:9:24.01:0,24,219	1/1:1,33:35:99:1122,99,0	1/1:4,17:21:51.15:589,51,0	1/1:0,28:28:72.21:830,72,0	1/1:2,16:18:38.70:450,39,0
chr10	53776075	.	G	GC	4452.60	PASS	AB=0.848;AC=29;AF=0.518;AN=56;BaseQRankSum=-0.626;DP=537;FS=4.978;HRun=7;HaplotypeScore=67.3244;InbreedingCoeff=0.8027;MQ=80.91;MQ0=0;MQRankSum=-3.880;QD=17.06;ReadPosRankSum=-0.446;VQSLOD=4.6732;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:84.10:0,84,804	0/0:10,0:10:24.04:0,24,232	0/0:21,0:21:48.04:0,48,451	0/0:18,0:18:44.99:0,45,410	1/1:3,20:23:57.11:670,57,0	0/1:2,10:12:4.90:230,0,5	1/1:3,20:23:54.17:652,54,0	0/1:11,0:11:14.44:14,0,24	1/1:1,17:18:39.12:470,39,0	1/1:2,0:14:31.56:167,32,0	1/1:1,0:10:23.12:133,23,0	0/0:28,0:28:72.10:0,72,694	0/0:23,0:23:60.07:0,60,569	1/1:2,22:24:54.17:652,54,0	0/0:30,0:30:84.09:0,84,794	0/0:15,0:15:39.06:0,39,377	0/0:21,0:21:42.48:0,42,180	0/1:21,0:21:18.88:19,0,116	1/1:1,1:13:34.47:201,34,0	1/1:2,1:11:17.17:86,17,0	1/1:1,0:19:34.50:176,35,0	0/0:26,0:26:75.05:0,75,707	0/0:22,0:22:60.08:0,60,573	0/0:22,0:22:57.07:0,57,544	1/1:2,22:24:48.15:580,48,0	1/1:0,0:8:17.33:92,17,0	1/1:2,0:17:34.55:179,35,0	1/1:4,0:13:23.13:131,23,0
chr10	53776328	.	G	GA	6459.26	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-10.919;DP=572;FS=4.189;HRun=9;HaplotypeScore=64.9450;InbreedingCoeff=0.9657;MQ=83.99;MQ0=2;MQRankSum=-3.188;QD=23.57;ReadPosRankSum=2.169;VQSLOD=5.9232;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:80.94:0,81,695	0/0:8,0:8:20.99:0,21,182	0/0:30,0:28:52.23:0,52,420	0/0:26,0:23:27.14:0,27,320	1/1:1,14:15:19.02:424,19,0	1/1:2,21:23:51.14:564,51,0	1/1:1,18:19:44.70:497,45,0	0/0:29,0:29:77.96:0,78,672	1/1:4,16:20:48.13:531,48,0	1/1:4,10:13:24.06:266,24,0	1/1:4,9:13:4.10:273,4,0	0/0:24,0:25:62.02:0,62,527	0/0:29,0:29:69.44:0,69,600	1/1:6,11:17:25.62:383,26,0	0/0:12,0:12:35.99:0,36,313	0/0:17,0:17:38.99:0,39,339	0/0:11,0:11:32.92:0,33,277	0/0:16,0:16:38.98:0,39,339	1/1:11,16:27:24.80:505,25,0	1/1:5,14:19:43.32:452,43,0	1/1:4,12:16:7.03:306,7,0	0/0:23,0:23:59.98:0,60,520	0/0:16,0:16:29.99:0,30,260	0/0:26,0:26:74.94:0,75,644	1/1:4,20:24:51.14:564,51,0	1/1:6,18:25:56.97:600,57,0	1/1:7,16:23:45.12:496,45,0	1/1:1,18:19:54.15:597,54,0
chr10	53776886	.	G	GTCT	22201.48	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-9.320;DP=598;FS=14.061;HRun=0;HaplotypeScore=81.0508;InbreedingCoeff=0.9998;MQ=86.60;MQ0=0;MQRankSum=-7.298;QD=61.67;ReadPosRankSum=1.734;VQSLOD=5.5592;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,105,1824	0/0:16,0:16:45.15:0,45,794	0/0:23,0:23:66.23:0,66,1143	0/0:27,0:29:84.18:0,84,1316	1/1:1,20:22:51.18:1200,51,0	1/1:1,17:18:48.16:1130,48,0	1/1:1,23:27:69.24:1626,69,0	1/1:4,20:27:72.22:1584,72,0	1/1:5,18:23:66.23:1474,66,0	1/1:3,18:21:60.21:1417,60,0	1/1:0,19:20:57.20:1341,57,0	0/0:21,0:21:63.22:0,63,1111	0/0:22,0:22:66.21:0,66,1127	1/1:2,18:23:54.19:1270,54,0	0/0:20,0:20:60.19:0,60,1031	0/0:23,0:23:69.24:0,69,1213	1/1:2,18:20:57.20:1346,57,0	1/1:1,13:15:39.13:922,39,0	1/1:5,19:24:66.22:1440,66,0	1/1:1,14:16:39.13:922,39,0	1/1:3,19:23:57.11:1237,57,0	0/0:11,0:11:33.11:0,33,582	0/0:10,0:10:30.10:0,30,529	0/0:28,0:28:84.29:0,84,1482	1/1:3,18:21:60.21:1383,60,0	1/1:4,20:27:75.26:1726,75,0	1/1:2,18:21:60.21:1404,60,0	1/1:1,11:12:33.11:780,33,0
chr10	53777141	.	G	GGCCTGTCT	36116.92	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-7.673;DP=744;FS=0.000;HRun=0;HaplotypeScore=175.5152;InbreedingCoeff=0.9991;MQ=75.05;MQ0=0;MQRankSum=-19.812;QD=87.24;ReadPosRankSum=-1.833;VQSLOD=4.8052;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:58:99:0,172,4736	0/0:13,0:13:36.12:0,36,1012	0/0:21,0:21:51.17:0,51,1237	0/0:21,0:21:54.19:0,54,1460	1/1:7,24:32:42.14:1823,42,0	1/1:4,17:22:51.18:2169,51,0	1/1:14,18:34:69.24:2896,69,0	1/1:14,15:33:84.27:2965,84,0	1/1:3,18:23:48.16:2112,48,0	1/1:7,17:24:63.22:2548,63,0	1/1:8,14:23:39.09:1601,39,0	0/0:39,0:39:99:0,114,3103	0/0:31,0:31:87.30:0,87,2438	1/1:5,32:44:96.33:4010,96,0	0/0:32,0:32:93.30:0,93,2464	0/0:37,0:37:99:0,108,2877	1/1:10,10:23:36.12:1514,36,0	1/1:5,10:16:39.13:1715,39,0	1/1:10,12:22:54.10:2195,54,0	1/1:2,19:22:48.16:2110,48,0	1/1:9,17:27:45.12:1860,45,0	0/0:13,0:13:39.12:0,39,1004	0/0:17,0:17:45.15:0,45,1221	0/0:48,0:48:99:0,135,3689	1/1:4,23:27:63.22:2759,63,0	1/1:5,12:20:51.15:1916,51,0	1/1:2,9:13:21.07:928,21,0	1/1:6,3:9:24.08:996,24,0
chr10	53780101	.	A	AAC	311.16	PASS	AB=0.833;AC=11;AF=0.204;AN=54;BaseQRankSum=-0.481;DP=580;FS=1.925;HRun=0;HaplotypeScore=108.9980;InbreedingCoeff=0.0628;MQ=62.57;MQ0=18;MQRankSum=-0.550;QD=1.51;ReadPosRankSum=-0.649;VQSLOD=2.1309;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,1:31:32.91:0,33,362	0/0:7,0:7:12.03:0,12,133	./.	0/0:25,0:21:2.75:0,3,33	0/0:21,0:20:15.04:0,15,167	0/0:15,0:16:3.92:0,4,93	0/0:29,0:25:22.96:0,23,307	0/1:22,0:24:21.06:25,0,21	0/0:22,0:22:5.75:0,6,30	0/0:14,0:14:17.77:0,18,154	1/1:14,0:15:2.47:10,2,0	0/1:10,5:13:25.28:42,0,25	0/1:11,5:16:24.45:78,0,24	0/0:23,0:23:11.47:0,11,59	0/0:21,0:23:17.16:0,17,227	0/0:17,0:17:3.74:0,4,137	0/1:42,0:41:10.41:10,0,68	0/0:19,0:17:4.09:0,4,16	0/0:11,0:17:12.01:0,12,131	0/0:14,0:14:6.93:0,7,126	0/0:29,0:30:13.07:0,13,190	1/1:7,1:8:6.49:89,6,0	0/1:10,8:18:36.52:37,0,58	0/1:23,20:45:99:152,0,164	0/1:17,0:17:0:0,0,0	0/0:24,0:22:16.44:0,16,133	0/0:17,0:16:11.59:0,12,72	0/0:3,0:3:3.01:0,3,33
chr10	53780126	.	ACACACACACGCACG	A	3087.61	PASS	AB=0.967;AC=20;AF=0.357;AN=56;BaseQRankSum=4.582;DP=573;FS=5.849;HRun=0;HaplotypeScore=166.4413;InbreedingCoeff=0.0053;MQ=49.92;MQ0=23;MQRankSum=-1.108;QD=8.87;ReadPosRankSum=0.439;VQSLOD=2.4281;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:27:42.09:0,42,994	0/0:6,0:6:18.05:0,18,892	0/0:7,0:2:2.97:0,3,20	0/0:8,0:6:6.02:0,6,115	0/0:12,6:17:23.19:0,23,202	0/1:19,1:19:81.30:260,0,81	0/1:31,0:26:99:214,0,166	1/1:23,0:19:10.12:414,10,0	1/1:21,0:20:6.01:130,6,0	0/1:15,0:15:93.07:203,0,93	0/1:13,0:13:18.15:51,0,18	0/0:19,0:16:21.07:0,21,597	0/0:22,0:21:29.82:0,30,782	0/1:25,0:25:9.14:273,0,9	0/0:21,0:21:35.87:0,36,1907	0/0:17,0:16:22.05:0,22,820	0/1:53,0:50:54.42:199,0,54	1/1:22,0:20:6.02:215,6,0	0/1:14,0:14:32.90:33,0,127	0/1:12,0:11:99:102,0,99	0/1:33,0:33:99:365,0,107	0/0:8,0:8:17.09:0,17,501	0/0:21,0:21:27.08:0,27,841	0/0:50,0:50:68.83:0,69,3158	0/1:20,1:20:12.52:96,0,13	0/1:13,10:21:99:381,0,192	1/1:18,1:18:14.73:289,15,0	0/1:3,0:3:12.17:38,0,12
chr10	53780128	.	ACACACACGCACG	A	4731.39	PASS	AB=0.697;AC=31;AF=0.554;AN=56;BaseQRankSum=3.507;DP=571;FS=4.468;HRun=0;HaplotypeScore=150.8072;InbreedingCoeff=0.7034;MQ=50.19;MQ0=22;MQRankSum=-0.364;QD=13.00;ReadPosRankSum=0.387;VQSLOD=3.0347;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:47.89:0,48,608	0/0:6,0:6:18.04:0,18,759	0/0:5,0:1:2.97:0,3,20	0/0:8,0:6:6:0,6,51	1/1:17,0:16:8.77:112,9,0	1/1:19,1:19:6.67:322,7,0	1/1:30,0:26:34.37:501,34,0	1/1:22,0:18:35.25:293,35,0	1/1:2,19:20:5.99:222,6,0	1/1:3,11:14:22.36:420,22,0	0/1:2,11:13:2.07:17,0,2	0/0:19,0:16:21.04:0,21,463	0/0:22,0:21:27.49:0,27,637	1/1:4,20:25:11.68:423,12,0	0/0:21,0:21:44.61:0,45,1576	0/0:18,0:17:38.62:0,39,644	0/1:51,0:48:13.13:145,0,13	1/1:22,0:20:6.02:162,6,0	1/1:14,0:14:14.69:153,15,0	1/1:11,0:11:18.88:185,19,0	1/1:34,0:34:43.33:564,43,0	0/0:8,0:8:18.04:0,18,457	0/0:20,0:20:27.05:0,27,691	0/0:51,0:51:71.88:0,72,2652	0/1:4,18:21:10.51:217,0,11	1/1:23,0:21:31.40:497,31,0	1/1:3,17:20:14.92:429,15,0	1/1:3,0:3:6:69,6,0
chr10	53780130	.	ACACACGCACGCACG	A	2227.35	PASS	AB=0.955;AC=22;AF=0.407;AN=54;BaseQRankSum=8.256;DP=565;FS=2.477;HRun=0;HaplotypeScore=168.3836;InbreedingCoeff=0.0922;MQ=50.17;MQ0=22;MQRankSum=-3.496;QD=6.49;ReadPosRankSum=-0.443;VQSLOD=2.7627;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:27:15.55:0,16,732	0/0:6,0:6:17.27:0,17,881	./.	0/0:7,0:4:5.99:0,6,64	0/0:17,0:16:15.89:0,16,128	0/1:21,0:20:25.42:182,0,25	0/1:31,0:26:79.05:88,0,79	0/1:23,0:19:17.39:261,0,17	1/1:21,0:20:6.01:111,6,0	0/1:14,0:14:37.96:115,0,38	1/1:13,0:13:2.84:33,3,0	0/0:20,0:17:24.06:0,24,675	0/0:21,0:20:10.92:0,11,803	1/1:24,0:24:11.96:273,12,0	0/0:21,0:21:11.38:0,11,1893	0/0:19,0:18:3.28:0,3,819	0/1:10,41:48:31.51:249,0,32	1/1:2,19:19:6.02:253,6,0	0/1:14,0:14:15.29:15,0,65	0/1:10,0:9:54.02:56,0,54	0/1:34,0:34:99:198,0,115	0/0:8,0:8:0.48:0,0,502	0/0:20,0:20:24.07:0,24,858	0/0:50,0:50:71.84:0,72,3319	1/1:22,0:21:6.02:72,6,0	0/1:22,0:20:99:240,0,129	1/1:19,0:18:12.43:235,12,0	0/1:3,0:3:3.59:16,0,4
chr10	53781216	.	A	ATATG	14398.63	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=-15.550;DP=705;FS=15.699;HRun=0;HaplotypeScore=95.3690;InbreedingCoeff=0.9479;MQ=60.69;MQ0=16;MQRankSum=0.533;QD=36.45;ReadPosRankSum=4.421;VQSLOD=4.1458;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:48.63:0,49,775	0/0:9,0:9:27.09:0,27,430	0/0:22,0:3:1.82:0,2,5	0/0:30,0:4:2.80:0,3,47	1/1:5,21:26:45.15:1090,45,0	1/1:7,16:23:21.07:509,21,0	1/1:5,16:22:30.10:727,30,0	0/0:51,0:51:78.25:0,78,1230	1/1:6,16:22:42.14:1017,42,0	1/1:10,26:36:79.51:1880,80,0	1/1:3,16:19:36.12:872,36,0	0/0:25,0:25:33.11:0,33,530	0/0:37,0:37:63.21:0,63,1014	1/1:13,11:24:24.08:581,24,0	0/0:23,0:23:51.17:0,51,824	0/0:23,0:23:63.21:0,63,1013	1/1:3,16:19:30.10:727,30,0	1/1:8,13:20:24.08:581,24,0	1/1:8,9:15:27.09:629,27,0	1/1:12,18:31:42.14:1017,42,0	1/1:7,15:24:30.10:727,30,0	0/0:22,0:22:42.14:0,42,679	0/0:28,0:28:63.20:0,63,989	0/0:12,0:12:21.07:0,21,341	1/1:12,13:26:30.10:727,30,0	1/1:11,19:30:57.16:1281,57,0	1/1:9,16:25:30.10:727,30,0	1/1:9,20:29:54.19:1308,54,0
chr10	53782356	.	A	AG	1946.24	PASS	AB=0.685;AC=14;AF=0.259;AN=54;BaseQRankSum=-6.183;DP=551;FS=5.190;HRun=10;HaplotypeScore=70.1815;InbreedingCoeff=0.7915;MQ=82.10;MQ0=0;MQRankSum=-0.650;QD=12.89;ReadPosRankSum=0.955;VQSLOD=3.6239;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:31:61.97:0,62,455	0/0:11,0:12:22.98:0,23,175	0/0:18,0:18:0.93:0,1,165	0/0:17,0:17:8.97:0,9,192	1/1:5,8:13:20.97:209,21,0	0/1:10,8:18:3.59:171,0,4	1/1:12,20:32:4.84:455,5,0	0/0:18,1:20:25.94:0,26,198	1/1:4,9:13:24.06:256,24,0	0/0:16,0:16:32.94:0,33,271	0/0:8,0:8:14.97:0,15,123	0/0:23,0:23:55.94:0,56,446	0/0:34,0:35:74.81:0,75,609	0/1:11,9:21:0.65:186,0,1	0/0:29,0:29:62.89:0,63,517	0/0:18,1:19:12.95:0,13,313	1/1:9,19:28:20.39:408,20,0	1/1:3,14:17:33.07:345,33,0	0/0:18,0:20:45.95:0,46,346	0/0:21,0:21:29.92:0,30,243	0/0:29,0:29:62.90:0,63,514	0/0:21,0:22:55.91:0,56,440	0/0:15,0:16:28.96:0,29,225	0/0:24,0:25:58.92:0,59,470	1/1:4,5:9:9.02:96,9,0	0/0:20,0:20:35.93:0,36,292	0/0:16,0:16:35.94:0,36,296	./.
chr10	53785699	.	A	AG	12654.54	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-14.824;DP=560;FS=4.193;HRun=0;HaplotypeScore=49.4688;InbreedingCoeff=0.9894;MQ=65.49;MQ0=10;MQRankSum=-0.325;QD=35.45;ReadPosRankSum=3.504;VQSLOD=4.2845;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:24:72.06:0,72,853	0/0:17,0:17:48.09:0,48,600	0/0:16,0:12:32.74:0,33,371	0/0:10,0:5:9:0,9,66	1/1:0,33:33:84.27:1169,84,0	1/1:0,9:9:24.08:335,24,0	1/1:0,14:14:24.55:335,25,0	1/1:1,34:33:99:1254,99,0	1/1:1,19:20:51.16:711,51,0	1/1:1,27:28:81.21:1073,81,0	1/1:2,24:26:69.22:963,69,0	0/0:24,0:24:69.21:0,69,929	0/0:15,0:14:39.10:0,39,494	1/1:3,22:25:19.62:674,20,0	0/0:22,0:22:66.13:0,66,851	0/0:17,0:17:42.66:0,43,588	1/1:1,22:24:66.18:881,66,0	1/1:1,14:15:36.05:478,36,0	1/1:2,21:22:60.17:819,60,0	1/1:1,18:18:51.11:688,51,0	1/1:1,15:16:36.11:502,36,0	0/0:19,0:18:54.18:0,54,743	0/0:20,0:20:57.14:0,57,771	0/0:16,0:13:26.90:0,27,398	1/1:0,22:22:63.21:879,63,0	1/1:0,21:21:63.19:847,63,0	1/1:0,19:19:54.18:753,54,0	1/1:0,7:7:21.07:293,21,0
chr10	53786427	.	ATGTGTGTGTGTG	A	1742.51	PASS	AB=0.914;AC=18;AF=0.346;AN=52;BaseQRankSum=6.698;DP=623;FS=57.729;HRun=0;HaplotypeScore=186.2111;InbreedingCoeff=0.6255;MQ=59.15;MQ0=23;MQRankSum=-3.159;QD=7.68;ReadPosRankSum=0.039;VQSLOD=1.0066;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:33:42.14:0,42,1700	0/0:13,0:13:6.02:0,6,264	./.	./.	0/0:22,0:22:30.10:0,30,1269	0/0:17,0:17:15.05:0,15,622	0/0:25,0:24:9.03:0,9,282	0/0:31,0:28:12.42:0,12,107	0/0:22,0:21:21.54:0,22,771	0/1:23,6:27:50.61:149,0,51	1/1:12,1:17:6.90:156,7,0	0/0:14,0:14:3.01:0,3,89	0/0:12,0:11:0:0,0,0	0/0:20,0:20:24.07:0,24,537	0/0:23,0:23:21.07:0,21,967	0/0:18,0:18:21.07:0,21,960	1/1:22,0:22:2.16:5,2,0	1/1:18,0:24:9.03:251,9,0	0/1:16,0:14:9.61:21,0,10	1/1:19,5:24:9.03:305,9,0	1/1:34,0:31:2.99:25,3,0	0/0:17,0:20:15.05:0,15,417	0/0:16,0:17:18.04:0,18,442	0/0:31,0:36:36.12:0,36,1108	0/0:25,0:27:42.13:0,42,1257	1/1:23,4:27:9.39:287,9,0	1/1:16,6:21:12.91:508,13,0	1/1:8,4:11:6.02:205,6,0
chr10	53787580	.	G	GA	8756.14	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-13.562;DP=608;FS=5.511;HRun=7;HaplotypeScore=61.5471;InbreedingCoeff=0.9919;MQ=75.45;MQ0=0;MQRankSum=-4.845;QD=30.62;ReadPosRankSum=1.603;VQSLOD=5.3225;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,102,963	0/0:12,0:12:27.03:0,27,261	0/0:35,0:28:38.59:0,39,417	0/0:20,0:16:9.70:0,10,178	1/1:4,21:25:60.18:714,60,0	1/1:1,21:22:60.18:725,60,0	1/1:4,9:13:24.07:290,24,0	0/0:34,0:34:69.10:0,69,666	1/1:0,15:15:45.14:544,45,0	1/1:2,25:27:75.23:906,75,0	1/1:2,22:24:63.15:745,63,0	0/0:16,0:16:39.06:0,39,377	0/0:22,0:22:59.96:0,60,579	1/1:2,17:19:45.14:544,45,0	0/0:20,0:20:60.08:0,60,573	0/0:23,0:23:60.09:0,60,579	0/0:34,0:34:96.15:0,96,927	0/0:22,0:22:57.09:0,57,550	1/1:3,16:19:51.15:605,51,0	1/1:3,14:17:42.13:505,42,0	1/1:1,9:10:24.07:290,24,0	0/0:19,0:19:51.08:0,51,492	0/0:12,0:12:27.03:0,27,260	0/0:12,0:12:33.03:0,33,311	1/1:4,21:25:54.16:643,54,0	1/1:1,23:24:69.21:832,69,0	1/1:1,32:33:93.29:1123,93,0	1/1:0,13:13:24.07:290,24,0
chr10	53789765	.	A	AT	11229.10	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-13.566;DP=618;FS=2.382;HRun=8;HaplotypeScore=58.0976;InbreedingCoeff=0.9931;MQ=79.98;MQ0=1;MQRankSum=-0.706;QD=28.57;ReadPosRankSum=0.121;VQSLOD=5.1083;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:84.01:0,84,768	0/0:5,0:5:14.98:0,15,131	0/0:22,0:18:14.36:0,14,252	0/0:20,0:16:20.94:0,21,183	1/1:1,32:33:87.26:1004,87,0	1/1:1,19:20:45.13:519,45,0	1/1:4,27:31:75.22:866,75,0	1/1:3,17:21:53.96:582,54,0	1/1:0,17:17:45.13:519,45,0	1/1:2,24:26:69.17:778,69,0	1/1:2,16:18:18.55:457,19,0	0/0:34,0:34:87.02:0,87,796	0/0:20,0:20:51.03:0,51,467	1/1:1,26:28:81.07:915,81,0	0/0:25,0:25:75.04:0,75,686	0/0:22,0:22:63.02:0,63,572	1/1:2,20:21:51.15:589,51,0	1/1:0,29:29:78.23:899,78,0	1/1:3,15:18:45.11:506,45,0	1/1:3,23:27:69:757,69,0	1/1:2,15:17:45.13:519,45,0	0/0:13,0:13:33.01:0,33,302	0/0:12,0:12:27:0,27,242	0/0:14,0:14:39:0,39,352	1/1:0,19:20:47.97:534,48,0	1/1:4,25:29:50.73:814,51,0	1/1:4,22:26:57.17:658,57,0	1/1:2,9:11:27.08:312,27,0
chr10	53791024	.	T	TA	9553.88	PASS	AB=0.565;AC=33;AF=0.589;AN=56;BaseQRankSum=-0.973;DP=621;FS=18.777;HRun=8;HaplotypeScore=116.6822;InbreedingCoeff=0.9396;MQ=71.95;MQ0=0;MQRankSum=-8.949;QD=26.32;ReadPosRankSum=-3.023;VQSLOD=2.7641;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:78:0,78,704	0/0:12,0:12:33.02:0,33,302	0/0:19,0:19:43.47:0,43,365	0/0:23,0:23:50.66:0,51,448	1/1:3,14:16:27.24:259,27,0	1/1:2,25:27:72:808,72,0	1/1:0,30:30:87.09:968,87,0	1/1:6,29:35:84.25:969,84,0	1/1:4,18:22:54.08:593,54,0	1/1:3,18:20:54.07:592,54,0	1/1:4,19:22:53.01:549,53,0	0/0:31,0:31:84.03:0,84,764	0/0:23,0:23:63.03:0,63,576	1/1:5,22:27:35.65:646,36,0	0/0:32,0:32:93:0,93,838	0/0:21,0:21:60.01:0,60,542	1/1:3,19:22:51.11:573,51,0	1/1:1,18:19:54.09:606,54,0	1/1:5,15:20:23.65:511,24,0	1/1:3,14:17:38.98:417,39,0	0/1:3,10:13:6.22:147,0,6	0/0:21,0:22:52.98:0,53,453	0/0:19,0:19:51:0,51,462	0/0:25,0:25:43.14:0,43,524	1/1:1,14:15:42.01:450,42,0	1/1:6,19:25:60.08:652,60,0	1/1:5,13:18:45.13:519,45,0	1/1:4,8:12:27.04:294,27,0
chr10	53791050	.	T	TATCCATCCATCCATCC	25275.05	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=9.183;DP=730;FS=0.000;HRun=0;HaplotypeScore=330.3590;InbreedingCoeff=0.9594;MQ=59.34;MQ0=4;MQRankSum=-12.569;QD=56.93;ReadPosRankSum=-3.608;VQSLOD=3.2099;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:45.14:0,45,1781	0/0:14,0:14:27.08:0,27,944	0/0:37,0:25:14.41:0,14,401	0/0:33,0:28:33.06:0,33,659	1/1:20,1:17:8.84:131,9,0	1/1:24,0:24:36.08:1235,36,0	1/1:41,0:39:59.99:1742,60,0	1/1:45,0:45:57.16:1639,57,0	1/1:35,4:39:88.92:3242,89,0	1/1:23,1:22:45.11:2422,45,0	1/1:17,2:17:14.79:261,15,0	0/0:23,0:23:39.12:0,39,1381	0/0:27,0:27:66.18:0,66,2174	1/1:26,2:28:50.95:1848,51,0	0/0:34,0:34:69.20:0,69,2515	0/0:20,0:20:51.16:0,51,1900	1/1:26,1:26:36.06:1244,36,0	1/1:22,1:23:33.03:1222,33,0	1/1:35,1:36:66:1996,66,0	1/1:19,1:19:20.96:596,21,0	1/1:16,0:15:2.79:119,3,0	0/0:24,0:24:43.22:0,43,1494	0/0:18,0:18:30.08:0,30,931	0/0:29,0:29:60.17:0,60,2220	1/1:14,1:15:27.06:1008,27,0	1/1:23,4:27:60.19:3229,60,0	1/1:8,6:25:24.08:1527,24,0	1/1:8,5:14:30.10:1815,30,0
chr10	53791082	.	CT	C	1549.92	PASS	AB=0.806;AC=15;AF=0.268;AN=56;BaseQRankSum=12.066;DP=691;FS=1.486;HRun=1;HaplotypeScore=167.2740;InbreedingCoeff=-0.3681;MQ=59.47;MQ0=4;MQRankSum=-10.282;QD=4.49;ReadPosRankSum=-1.754;VQSLOD=-0.3736;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:90.18:0,90,1410	0/0:13,0:13:39.13:0,39,623	0/0:39,1:31:86.86:0,87,1315	0/0:39,1:30:87.14:0,87,1248	0/1:22,9:27:8.46:8,0,677	0/1:12,6:18:99:173,0,447	0/1:27,4:29:37.21:37,0,874	0/0:28,1:29:44.54:0,45,1175	0/1:27,9:36:99:278,0,778	0/1:17,9:24:99:191,0,566	0/1:8,4:10:57.13:57,0,206	0/0:21,0:21:63.20:0,63,981	0/0:25,0:25:75.23:0,75,1170	0/1:21,6:27:99:185,0,760	0/0:35,0:35:99:0,105,1650	0/0:22,0:22:66.21:0,66,1032	0/1:22,3:25:15.41:15,0,877	0/1:13,5:17:99:150,0,350	0/0:13,2:15:3.33:0,3,588	0/1:16,3:18:50.33:50,0,483	0/1:20,2:21:9.67:10,0,379	0/0:26,0:26:66.22:0,66,1047	0/0:21,0:21:63.21:0,63,998	0/0:28,0:28:83.63:0,84,1279	0/1:11,6:16:99:172,0,362	0/1:17,5:22:99:101,0,629	0/1:24,4:28:99:124,0,403	0/1:7,6:13:99:154,0,159
chr10	53793052	.	T	TCACCATCACCATCAC	14663.47	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=3.653;DP=891;FS=9.672;HRun=0;HaplotypeScore=254.5399;InbreedingCoeff=0.9222;MQ=51.29;MQ0=10;MQRankSum=-9.867;QD=27.05;ReadPosRankSum=-3.589;VQSLOD=2.0078;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:56:99:0,159,4316	0/0:13,0:13:39.13:0,39,1275	0/0:30,0:16:45.11:0,45,862	0/0:28,0:16:29.48:0,29,450	1/1:2,0:35:14.92:331,15,0	1/1:3,0:30:12.04:348,12,0	1/1:1,0:39:12.04:212,12,0	1/1:45,0:45:99:1281,121,0	1/1:3,0:35:36.12:1093,36,0	1/1:1,28:38:64.10:2212,64,0	1/1:4,11:24:6.02:417,6,0	0/0:31,0:31:81.14:0,81,2683	0/0:27,0:27:78.23:0,78,2630	1/1:0,0:35:32.86:1072,33,0	0/0:31,0:31:93.24:0,93,2613	0/0:21,0:21:60.16:0,60,1722	1/1:0,0:34:9.03:591,9,0	1/1:2,0:29:9.03:590,9,0	1/1:3,14:28:62.76:1760,63,0	1/1:1,14:23:14.96:532,15,0	1/1:43,0:41:51.22:888,51,0	0/0:31,0:31:81.21:0,81,2505	0/0:19,0:18:48.13:0,48,1210	0/0:60,0:60:99:0,165,5717	1/1:1,0:26:33.11:996,33,0	1/1:0,16:20:48.14:1455,48,0	1/1:1,20:33:8.78:662,9,0	1/1:1,10:20:3.01:221,3,0
chr10	53794128	.	TTTAA	T	3388.33	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=12.083;DP=638;FS=2.357;HRun=0;HaplotypeScore=107.1991;InbreedingCoeff=0.9944;MQ=71.71;MQ0=0;MQRankSum=-4.048;QD=50.57;ReadPosRankSum=2.528;VQSLOD=4.4389;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,135,3912	0/0:6,0:6:18.06:0,18,521	0/0:18,0:18:27.25:0,27,1101	0/0:15,0:15:38.83:0,39,928	0/0:27,0:27:81.26:0,81,2179	0/0:16,0:16:48.15:0,48,1270	0/0:33,0:33:99:0,99,2817	0/0:9,0:9:27.08:0,27,722	0/0:16,0:16:48.16:0,48,1391	0/0:25,0:25:72.24:0,72,2016	0/0:15,0:15:45.15:0,45,1288	0/0:23,0:23:69.24:0,69,2000	0/0:26,0:26:78.27:0,78,2261	0/0:23,0:23:69.24:0,69,1916	0/0:25,0:25:75.25:0,75,2021	0/0:16,0:16:48.16:0,48,1391	1/1:0,33:33:87.30:1737,87,0	1/1:0,34:34:87.21:1651,87,0	0/0:18,0:18:54.16:0,54,1445	0/0:11,0:11:30.10:0,30,870	0/0:31,0:31:93.32:0,93,2618	0/0:21,0:21:63.22:0,63,1780	0/0:26,0:26:78.27:0,78,2172	0/0:26,0:26:72.25:0,72,2087	0/0:23,0:23:69.24:0,69,1945	0/0:30,0:30:90.31:0,90,2525	0/0:36,0:36:99:0,108,2966	0/0:11,0:11:33.11:0,33,942
chr10	53794828	.	G	GTGAA	1318.47	PASS	AB=0.605;AC=3;AF=0.054;AN=56;BaseQRankSum=-6.016;DP=686;FS=8.546;HRun=0;HaplotypeScore=107.1907;InbreedingCoeff=0.5864;MQ=69.95;MQ0=0;MQRankSum=-0.763;QD=30.66;ReadPosRankSum=0.690;VQSLOD=2.7854;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:87.21:0,87,1343	0/0:10,0:10:21.05:0,21,319	0/0:16,0:16:5.24:0,5,110	0/0:16,0:16:15.04:0,15,223	0/0:28,0:28:63.12:0,63,937	0/0:14,0:14:33.10:0,33,516	0/0:36,0:36:81.25:0,81,1296	0/0:31,0:31:30.37:0,30,726	0/0:29,0:29:75.04:0,75,1021	0/0:25,0:25:51.15:0,51,771	0/0:22,0:22:48.15:0,48,755	0/0:26,0:26:63.17:0,63,957	0/0:30,0:30:72.18:0,72,1079	0/0:25,0:25:63.20:0,63,1001	0/0:33,0:33:75.22:0,75,1179	0/0:36,0:36:72.21:0,72,1130	0/1:8,13:23:59.15:766,0,59	1/1:5,14:19:27.09:658,27,0	0/0:21,0:21:39.03:0,39,429	0/0:15,0:15:30.08:0,30,456	0/0:24,0:24:60.16:0,60,909	0/0:27,0:27:48.16:0,48,783	0/0:24,0:24:39.01:0,39,529	0/0:23,0:23:54.15:0,54,832	0/0:24,0:24:60.10:0,60,896	0/0:30,0:30:51.14:0,51,765	0/0:24,0:24:57.15:0,57,857	0/0:13,0:13:36.12:0,36,590
chr10	53798949	.	A	AT	8449.42	PASS	AB=0.625;AC=33;AF=0.589;AN=56;BaseQRankSum=-14.117;DP=661;FS=0.338;HRun=10;HaplotypeScore=68.5397;InbreedingCoeff=0.9328;MQ=76.56;MQ0=1;MQRankSum=-1.311;QD=21.61;ReadPosRankSum=1.677;VQSLOD=5.7665;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,1:44:81.77:0,82,864	0/0:12,0:12:18.44:0,18,149	0/0:14,0:15:26.22:0,26,203	0/0:26,0:20:30.72:0,31,249	1/1:4,15:19:11.45:327,11,0	1/1:2,16:18:42.11:448,42,0	1/1:2,20:22:45.11:480,45,0	1/1:9,18:27:32.50:551,32,0	0/1:4,6:10:6.60:142,0,7	1/1:10,25:35:69.13:716,69,0	1/1:2,16:18:39.10:415,39,0	0/0:21,0:21:53.90:0,54,439	0/0:24,0:24:47.13:0,47,496	1/1:7,12:19:33.08:352,33,0	0/0:30,0:30:62.82:0,63,503	0/0:27,0:26:56.88:0,57,463	1/1:4,28:32:78.20:832,78,0	1/1:7,29:36:59.57:839,60,0	1/1:7,17:24:29.43:492,29,0	1/1:5,17:22:42.11:447,42,0	1/1:7,17:24:45.11:480,45,0	0/0:28,0:28:52.96:0,53,424	0/0:19,0:19:32.79:0,33,271	0/0:23,0:23:56.86:0,57,461	1/1:2,14:16:30.08:320,30,0	1/1:9,19:29:59.93:586,60,0	1/1:4,24:28:66.17:704,66,0	1/1:1,11:12:30.08:320,30,0
chr10	53799694	.	GCC	G	1760.15	PASS	AB=0.545;AC=15;AF=0.300;AN=50;BaseQRankSum=3.623;DP=306;FS=10.596;HRun=12;HaplotypeScore=48.0864;InbreedingCoeff=0.7642;MQ=76.09;MQ0=0;MQRankSum=0.812;QD=15.44;ReadPosRankSum=5.151;VQSLOD=0.8857;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:13:5.97:0,6,48	./.	0/0:14,0:13:26.29:0,26,233	0/0:10,0:10:13.91:0,14,106	1/1:0,12:12:24.04:244,24,0	1/1:6,11:18:26.67:327,27,0	1/1:7,22:30:59.82:591,60,0	0/0:13,0:15:9.02:0,9,111	1/1:2,12:14:33.07:336,33,0	0/0:6,0:6:6.02:0,6,90	./.	0/0:10,0:10:21.04:0,21,252	0/0:9,0:9:12.03:0,12,151	0/1:3,14:18:4.35:281,0,4	0/0:14,0:14:17.80:0,18,206	0/0:6,0:11:12.02:0,12,142	1/1:2,0:13:19.24:57,19,0	1/1:1,0:4:3.55:11,4,0	0/0:17,0:17:20.53:0,21,217	./.	0/0:20,0:25:40.76:0,41,470	0/0:3,0:4:6.01:0,6,71	0/0:4,0:5:11.53:0,12,141	0/0:15,0:15:27.04:0,27,352	1/1:1,4:5:9.02:92,9,0	0/0:5,0:6:9.01:0,9,99	0/0:8,0:11:19.79:0,20,240	0/0:3,0:3:3.01:0,3,45
chr10	53800220	.	T	TAA	1535.65	PASS	AB=1.000;AC=16;AF=0.286;AN=56;BaseQRankSum=3.871;DP=479;FS=12.594;HRun=14;HaplotypeScore=73.6879;InbreedingCoeff=0.7937;MQ=70.95;MQ0=2;MQRankSum=-2.037;QD=10.45;ReadPosRankSum=-5.140;VQSLOD=-0.3325;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:32:50.16:0,50,465	0/0:4,0:4:5.94:0,6,50	0/1:16,0:11:0:0,0,0	0/1:11,0:7:25.81:26,0,37	1/1:4,4:20:41.21:350,41,0	1/1:5,3:18:19.10:162,19,0	1/1:5,6:15:19.15:182,19,0	1/1:20,0:22:36.98:354,37,0	1/1:3,5:9:9.02:107,9,0	0/0:15,0:16:17.27:0,17,137	0/0:12,0:14:8.07:0,8,89	0/0:16,0:17:26.41:0,26,212	0/0:27,0:27:5.37:0,5,308	1/1:4,15:21:27.68:304,28,0	0/0:20,0:22:14.03:0,14,258	0/0:18,0:19:9.62:0,10,247	0/0:13,0:15:23.17:0,23,225	0/0:16,0:16:38.84:0,39,326	0/0:15,0:19:19.30:0,19,253	0/0:16,0:16:29.74:0,30,251	0/0:13,0:13:23.72:0,24,197	0/0:14,0:14:17.64:0,18,150	0/0:11,0:13:11.01:0,11,115	0/0:17,0:17:35.59:0,36,282	1/1:8,3:12:26.33:242,26,0	0/0:24,0:26:22.69:0,23,173	0/0:24,0:28:45.37:0,45,400	0/0:4,0:4:8.91:0,9,75
chr10	53800793	.	CTGTG	C	1165.33	PASS	AB=0.848;AC=15;AF=0.268;AN=56;BaseQRankSum=4.604;DP=582;FS=43.954;HRun=0;HaplotypeScore=97.8900;InbreedingCoeff=0.5645;MQ=70.67;MQ0=11;MQRankSum=0.993;QD=6.66;ReadPosRankSum=0.664;VQSLOD=0.1095;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:37:35.80:0,36,561	0/0:7,0:7:6.48:0,6,97	0/0:31,0:20:3.01:0,3,45	0/0:22,0:15:9:0,9,108	0/0:12,0:15:2.74:0,3,12	0/1:17,2:20:77.08:77,0,102	0/0:16,0:20:8.49:0,8,49	0/0:23,0:21:5.98:0,6,61	0/0:8,0:12:8.49:0,8,49	1/1:15,4:19:9.60:184,10,0	1/1:16,0:18:8.22:61,8,0	0/0:18,2:20:33.55:0,34,584	0/0:9,0:9:11.78:0,12,176	0/0:8,0:13:13.97:0,14,74	0/0:24,0:24:48.12:0,48,904	0/0:28,0:28:36.12:0,36,748	0/0:28,0:31:14.94:0,15,181	0/0:22,0:22:15.05:0,15,285	0/0:14,0:13:5.75:0,6,39	1/1:12,10:22:21.54:329,22,0	0/1:17,1:18:3.46:80,0,3	0/0:20,0:20:35.71:0,36,634	0/0:10,0:20:22.68:0,23,432	0/0:32,0:33:44.89:0,45,929	0/1:14,0:20:28.44:28,0,128	1/1:20,8:28:27.04:349,27,0	1/1:19,2:21:15.02:186,15,0	1/1:4,2:4:3.01:47,3,0
chr10	53802308	.	ATG	A	1119.16	PASS	AB=0.902;AC=36;AF=0.720;AN=50;BaseQRankSum=7.224;DP=601;FS=0.000;HRun=0;HaplotypeScore=113.4401;InbreedingCoeff=0.1551;MQ=59.27;MQ0=16;MQRankSum=-2.114;QD=2.33;ReadPosRankSum=0.358;VQSLOD=2.1302;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:24:12.04:0,12,164	1/1:6,3:10:8.69:60,9,0	./.	./.	1/1:15,0:25:5.68:28,6,0	1/1:9,0:17:11.42:58,11,0	1/1:19,0:22:2.84:14,3,0	./.	1/1:12,0:19:14.20:70,14,0	0/1:22,0:22:23.25:23,0,31	0/1:9,1:10:26.04:26,0,37	0/1:16,2:18:23.03:23,0,79	0/0:16,0:16:6.02:0,6,85	1/1:10,0:19:22.85:118,23,0	0/1:24,4:28:4.98:5,0,323	0/1:25,1:26:2:2,0,324	1/1:17,7:24:20.88:206,21,0	0/1:17,7:23:47.17:92,0,47	1/1:24,0:24:5.67:28,6,0	1/1:20,5:25:11.89:105,12,0	1/1:22,8:28:6.01:64,6,0	0/0:23,0:22:17.42:0,17,212	0/1:21,3:22:40.05:40,0,234	0/1:22,2:24:17.03:17,0,130	1/1:9,0:17:14.33:76,14,0	1/1:20,0:23:8.05:37,8,0	1/1:20,5:25:14.87:142,15,0	1/1:13,0:16:8.52:42,9,0
chr10	53802661	.	GC	G	11372.16	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=10.354;DP=610;FS=3.007;HRun=1;HaplotypeScore=86.7132;InbreedingCoeff=0.9995;MQ=90.98;MQ0=1;MQRankSum=-3.675;QD=38.55;ReadPosRankSum=5.139;VQSLOD=5.2946;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:84.29:0,84,1326	0/0:11,0:11:33.10:0,33,503	0/0:29,0:29:84.24:0,84,1290	0/0:29,0:29:84.25:0,84,1252	1/1:0,28:28:75.22:1026,75,0	1/1:0,28:28:81.27:1131,81,0	1/1:0,31:31:84.28:1173,84,0	0/0:23,0:23:66.20:0,66,988	1/1:0,19:19:51.17:712,51,0	1/1:0,26:26:75.25:1049,75,0	1/1:0,20:20:57.19:795,57,0	0/0:19,0:19:54.18:0,54,862	0/0:19,0:19:48.13:0,48,730	1/1:0,11:11:30.10:417,30,0	0/0:21,0:21:51.17:0,51,813	0/0:20,0:20:57.19:0,57,909	0/0:19,0:19:57.17:0,57,874	0/0:16,0:16:48.16:0,48,763	1/1:0,9:9:24:294,24,0	1/1:0,28:28:75.22:1027,75,0	1/1:0,20:20:51.17:713,51,0	0/0:31,0:30:81.26:0,81,1269	0/0:33,0:33:81.28:0,81,1282	0/0:16,0:16:42.13:0,42,647	1/1:0,19:19:57.19:796,57,0	1/1:0,27:27:81.23:1111,81,0	1/1:0,20:20:54.18:752,54,0	1/1:0,9:9:27.09:377,27,0
chr10	53803611	.	ATCTCTC	A	5174.72	PASS	AB=0.818;AC=27;AF=0.482;AN=56;BaseQRankSum=11.889;DP=677;FS=61.725;HRun=0;HaplotypeScore=194.3381;InbreedingCoeff=0.8417;MQ=53.52;MQ0=3;MQRankSum=-7.933;QD=19.98;ReadPosRankSum=0.196;VQSLOD=2.4169;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:81.14:0,81,2392	0/0:4,0:4:6.02:0,6,179	0/0:31,0:22:22.50:0,22,627	0/0:30,0:19:23.61:0,24,391	1/1:5,9:14:18.01:386,18,0	1/1:7,7:14:9.03:194,9,0	1/1:7,22:29:18.06:387,18,0	0/0:38,0:35:30.63:0,31,1648	1/1:10,15:26:9.03:194,9,0	0/1:14,4:18:99:399,0,109	1/1:3,5:8:3.01:65,3,0	0/0:36,0:36:72.18:0,72,2059	0/0:28,0:28:54.17:0,54,1595	1/1:7,17:24:21.07:452,21,0	0/0:42,0:46:72.23:0,72,2195	0/0:37,0:38:80.53:0,81,2564	0/0:29,0:30:60.21:0,60,1586	0/0:12,0:12:33.11:0,33,1007	1/1:12,2:13:15.03:225,15,0	1/1:7,10:17:27.07:541,27,0	1/1:34,5:39:27.03:418,27,0	0/0:23,0:25:51.16:0,51,1428	0/0:15,0:16:36.12:0,36,1006	0/0:39,0:40:59.21:0,59,1646	1/1:6,16:21:14.72:322,15,0	1/1:4,8:12:30.10:640,30,0	1/1:6,14:20:42.14:891,42,0	1/1:2,0:2:3.01:63,3,0
chr10	53803797	.	GA	G	7760.95	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=18.610;DP=715;FS=10.835;HRun=9;HaplotypeScore=106.9850;InbreedingCoeff=0.9856;MQ=75.24;MQ0=0;MQRankSum=-1.117;QD=21.80;ReadPosRankSum=3.666;VQSLOD=4.3833;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:87.24:0,87,989	0/0:10,0:10:27.08:0,27,310	0/0:20,0:20:45.13:0,45,513	0/0:13,0:13:24:0,24,252	1/1:4,32:36:83.94:743,84,0	1/1:1,31:32:84.04:763,84,0	1/1:2,16:18:45.02:409,45,0	0/0:30,0:30:81.23:0,81,927	1/1:3,20:23:50.99:458,51,0	1/1:5,22:27:66.01:593,66,0	1/1:2,15:17:6.14:267,6,0	0/0:24,0:24:72.21:0,72,831	0/0:27,0:27:75.21:0,75,855	1/1:5,21:26:57.03:518,57,0	0/0:37,0:37:99:0,102,1170	0/0:34,0:34:90.26:0,90,1029	0/0:35,0:35:84.25:0,84,969	0/0:20,0:20:51.15:0,51,587	1/1:2,26:28:78.04:707,78,0	1/1:5,26:31:75.02:677,75,0	1/1:3,16:19:48.02:437,48,0	0/0:32,0:32:93.19:0,93,1041	0/0:30,0:30:72.16:0,72,805	0/0:15,0:15:42.12:0,42,485	1/1:5,22:27:54.02:490,54,0	1/1:6,26:32:77.92:692,78,0	1/1:2,20:22:57.02:515,57,0	1/1:0,18:18:54.03:491,54,0
chr10	53805123	.	T	TGA	13871.43	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-17.001;DP=649;FS=0.298;HRun=0;HaplotypeScore=72.3466;InbreedingCoeff=0.9954;MQ=91.55;MQ0=1;MQRankSum=-5.080;QD=48.00;ReadPosRankSum=3.920;VQSLOD=6.1582;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,147,2026	0/0:10,0:10:24.08:0,24,344	0/0:28,0:28:75.25:0,75,1048	0/0:27,0:27:67.56:0,68,972	1/1:2,20:22:51.17:934,51,0	1/1:1,23:24:57.20:1045,57,0	1/1:0,29:29:81.28:1485,81,0	0/0:26,0:26:66.21:0,66,928	1/1:2,15:16:42.14:770,42,0	1/1:1,18:20:57.20:1042,57,0	1/1:1,15:16:48.16:877,48,0	0/0:36,0:36:99:0,102,1459	0/0:30,0:30:87.28:0,87,1227	1/1:1,21:22:51.17:935,51,0	0/0:19,0:19:57.18:0,57,798	0/0:14,0:14:39.13:0,39,559	0/0:43,0:43:99:0,120,1699	0/0:26,0:26:72.24:0,72,1029	1/1:0,10:10:30.10:548,30,0	1/1:2,18:20:45.15:810,45,0	1/1:3,49:53:99:2420,132,0	0/0:17,0:17:45.15:0,45,641	0/0:12,0:12:36.11:0,36,498	0/0:23,0:23:66.22:0,66,943	1/1:0,17:16:48.16:880,48,0	1/1:0,20:20:60.21:1100,60,0	1/1:0,15:14:45.15:825,45,0	1/1:1,3:4:12.04:201,12,0
chr10	53807197	.	GA	G	8129.96	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=16.182;DP=674;FS=2.085;HRun=9;HaplotypeScore=64.7701;InbreedingCoeff=0.9780;MQ=72.78;MQ0=0;MQRankSum=0.738;QD=22.46;ReadPosRankSum=2.522;VQSLOD=5.8258;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:75.21:0,75,856	0/0:6,0:6:18.05:0,18,208	0/0:15,0:15:3.94:0,4,273	0/0:11,0:10:26.95:0,27,271	1/1:3,32:35:92.81:815,93,0	1/1:1,17:18:48.03:439,48,0	1/1:1,12:13:36.02:329,36,0	0/0:30,0:31:87.05:0,87,951	1/1:3,21:24:54.02:494,54,0	1/1:4,32:36:96.02:869,96,0	1/1:3,26:29:75.04:686,75,0	0/0:21,0:21:63.15:0,63,699	0/0:32,0:33:93.09:0,93,1042	1/1:1,30:31:78.04:714,78,0	0/0:22,0:22:60.18:0,60,693	0/0:22,0:23:63.17:0,63,710	0/0:28,1:29:52.52:0,53,809	0/0:18,0:18:51.14:0,51,578	1/1:7,15:22:45.02:412,45,0	1/1:7,25:32:75.03:686,75,0	1/1:2,35:37:90.05:824,90,0	0/0:33,0:33:90.26:0,90,1030	0/0:18,0:18:45.13:0,45,518	0/0:22,0:22:60.18:0,60,692	1/1:1,10:11:27.01:247,27,0	1/1:3,22:25:40.98:572,41,0	1/1:6,31:37:78.04:714,78,0	1/1:0,12:12:36.02:329,36,0
chr10	53808152	.	CT	C	2040.49	PASS	AB=1.000;AC=27;AF=0.482;AN=56;BaseQRankSum=12.742;DP=425;FS=18.157;HRun=1;HaplotypeScore=83.4640;InbreedingCoeff=0.9123;MQ=79.16;MQ0=0;MQRankSum=-4.494;QD=11.15;ReadPosRankSum=5.391;VQSLOD=0.2753;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:63.13:0,63,833	0/0:4,0:4:12.04:0,12,182	0/0:16,0:16:24.89:0,25,530	0/0:26,1:22:29.32:0,29,480	1/1:17,1:18:18.68:205,19,0	1/1:14,0:14:11.51:123,12,0	0/1:21,0:21:0.97:148,0,1	0/0:22,0:22:60.16:0,60,791	1/1:16,2:18:25.05:295,25,0	1/1:7,0:7:6.31:52,6,0	1/1:6,1:7:6:104,6,0	0/0:13,0:13:39.12:0,39,573	0/0:17,0:17:42.02:0,42,512	1/1:18,0:18:33.97:293,34,0	0/0:26,0:26:75.19:0,75,1064	0/0:17,0:17:44.99:0,45,646	0/0:32,0:32:93.27:0,93,1349	0/0:19,0:19:54.18:0,54,818	1/1:16,0:16:34.46:235,34,0	1/1:7,1:8:21.04:110,21,0	1/1:13,0:13:14.30:102,14,0	0/0:11,0:11:27.05:0,27,350	0/0:5,0:5:15.04:0,15,208	0/0:11,0:11:33.11:0,33,499	1/1:8,0:8:20.08:102,20,0	1/1:11,0:11:14.11:105,14,0	1/1:15,0:15:42.16:266,42,0	1/1:9,0:9:20.03:123,20,0
chr10	53808159	.	AC	A	4566.75	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=12.887;DP=382;FS=3.054;HRun=5;HaplotypeScore=71.0665;InbreedingCoeff=0.9708;MQ=76.49;MQ0=0;MQRankSum=-2.957;QD=26.86;ReadPosRankSum=4.100;VQSLOD=4.7993;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:42.10:0,42,536	0/0:4,0:4:8.97:0,9,85	0/0:15,0:15:23.66:0,24,413	0/0:23,0:18:26.93:0,27,415	1/1:3,12:15:23.58:265,24,0	1/1:3,12:15:21.78:396,22,0	1/1:2,18:20:48.05:525,48,0	0/0:16,0:16:39.11:0,39,508	1/1:5,12:17:42.12:469,42,0	1/1:0,5:5:15.04:170,15,0	1/1:2,4:6:9.02:100,9,0	0/0:11,0:11:21.96:0,22,288	0/0:11,0:11:27.08:0,27,348	1/1:2,16:18:45.04:489,45,0	0/0:22,0:22:60.20:0,60,807	0/0:15,0:15:42:0,42,567	0/0:33,0:33:99:0,99,1299	0/0:19,0:19:54.18:0,54,738	1/1:2,10:12:30.08:338,30,0	1/1:1,7:8:21.06:235,21,0	1/1:0,15:15:30.09:339,30,0	0/0:10,0:10:18.05:0,18,229	0/0:4,0:4:12.04:0,12,161	0/0:10,0:10:21.54:0,22,288	1/1:0,8:8:24.07:269,24,0	1/1:1,8:9:24.07:271,24,0	1/1:0,16:16:48.13:532,48,0	1/1:0,6:6:15.04:170,15,0
chr10	53808337	.	GAGAT	G	11706.94	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=17.722;DP=559;FS=8.294;HRun=0;HaplotypeScore=111.3529;InbreedingCoeff=0.9960;MQ=83.53;MQ0=0;MQRankSum=-8.736;QD=55.48;ReadPosRankSum=2.217;VQSLOD=5.7738;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,148,4146	0/0:7,0:7:21.07:0,21,608	0/0:26,0:26:70.73:0,71,2060	0/0:23,0:23:63.22:0,63,1646	1/1:0,17:18:51.17:1042,51,0	1/1:0,12:12:36.12:753,36,0	1/1:0,13:13:33.11:665,33,0	0/0:25,0:25:75.25:0,75,2105	1/1:0,17:17:48.16:1005,48,0	1/1:0,20:20:60.21:1257,60,0	1/1:0,6:6:18.06:377,18,0	0/0:26,0:26:78.27:0,78,2206	0/0:18,0:18:54.19:0,54,1561	1/1:0,18:18:51.18:1067,51,0	0/0:28,0:27:81.28:0,81,2291	0/0:26,0:26:78.25:0,78,2163	0/0:38,0:38:99:0,111,3177	0/0:25,0:25:75.26:0,75,2172	1/1:0,5:5:15.01:255,15,0	1/1:0,16:15:39.09:749,39,0	1/1:0,26:26:66.03:1185,66,0	0/0:17,0:17:51.18:0,51,1478	0/0:17,0:17:51.18:0,51,1477	0/0:22,0:22:66.23:0,66,1891	1/1:0,17:18:45.15:943,45,0	1/1:0,15:15:42.12:838,42,0	1/1:0,17:17:48.16:1006,48,0	1/1:0,10:10:27.09:566,27,0
chr10	53808476	.	GTA	G	2901.54	PASS	AB=0.965;AC=39;AF=0.696;AN=56;BaseQRankSum=-6.626;DP=541;FS=1.159;HRun=0;HaplotypeScore=141.0280;InbreedingCoeff=-0.2756;MQ=45.49;MQ0=9;MQRankSum=0.532;QD=5.55;ReadPosRankSum=-8.274;VQSLOD=0.2292;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:49,1:49:99:280,0,192	0/1:6,0:6:29.15:47,0,29	0/1:27,0:10:26.19:32,0,26	0/1:24,0:9:23.83:42,0,24	1/1:13,0:13:2.99:23,3,0	1/1:20,0:20:8.94:67,9,0	1/1:28,1:29:38.40:273,38,0	1/1:31,0:30:38.60:358,39,0	0/0:12,0:12:4.38:0,4,14	0/1:11,0:11:23.15:23,0,34	1/1:8,0:8:17.48:112,17,0	0/1:20,0:20:58.69:92,0,59	0/1:18,0:19:98.51:99,0,117	1/1:20,0:20:1.22:35,1,0	0/1:21,2:23:60.79:184,0,61	0/1:24,2:26:98.81:171,0,99	1/1:21,5:26:6.02:227,6,0	1/1:3,19:23:26.90:296,27,0	0/1:14,0:10:18.64:19,0,37	1/1:8,0:8:4.90:18,5,0	1/1:22,1:23:17.09:111,17,0	1/1:12,0:12:12.44:96,12,0	0/1:9,0:9:6.55:72,0,7	0/1:34,2:35:99:245,0,141	1/1:8,0:8:3:25,3,0	0/1:19,0:19:30.58:81,0,31	1/1:11,0:10:3.68:26,4,0	0/0:6,0:5:0.47:0,0,1
chr10	53808477	.	TATATGTGTGA	T	5992.12	PASS	AB=0.983;AC=36;AF=0.643;AN=56;BaseQRankSum=-12.692;DP=518;FS=7.555;HRun=0;HaplotypeScore=177.6098;InbreedingCoeff=-0.4655;MQ=45.65;MQ0=9;MQRankSum=0.677;QD=11.84;ReadPosRankSum=-12.807;VQSLOD=-0.3973;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:50,0:49:99:560,0,1080	0/1:6,0:6:79.74:80,0,201	0/1:18,8:9:99:244,0,210	0/1:29,0:8:79.30:145,0,79	1/1:12,0:12:6.01:97,6,0	1/1:20,0:20:14.91:181,15,0	1/1:28,0:28:54.15:928,54,0	1/1:27,0:26:16.30:717,16,0	0/0:12,0:12:6.31:0,6,142	0/1:11,0:11:99:290,0,177	0/1:8,0:8:4.73:205,0,5	0/1:18,0:18:99:148,0,379	0/1:19,0:19:20.86:21,0,767	0/1:18,0:18:54.07:120,0,54	0/1:23,0:23:99:305,0,419	0/1:26,0:26:99:125,0,617	0/1:26,0:26:99:224,0,200	0/1:22,0:22:99:103,0,185	0/1:12,0:9:37.16:152,0,37	1/1:7,0:7:6.02:95,6,0	1/1:22,0:22:17.13:302,17,0	1/1:9,0:9:9.50:148,10,0	0/1:8,0:8:99:102,0,221	0/1:35,0:35:99:340,0,781	1/1:5,0:5:3.01:46,3,0	0/1:17,0:18:99:268,0,206	0/1:13,0:12:26.82:27,0,67	1/1:6,0:5:2.97:20,3,0
chr10	53808482	.	G	GTGTGTC	1263.06	PASS	AB=1.000;AC=27;AF=0.482;AN=56;BaseQRankSum=0.555;DP=522;FS=11.446;HRun=0;HaplotypeScore=178.4039;InbreedingCoeff=0.5628;MQ=47.23;MQ0=7;MQRankSum=-3.958;QD=5.22;ReadPosRankSum=-2.600;VQSLOD=1.0740;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:49:84.47:0,84,1155	0/0:6,0:6:15.02:0,15,191	0/0:24,0:9:1.07:0,1,213	0/1:31,0:10:40.17:40,0,154	1/1:4,0:12:1.25:3,1,0	1/1:7,0:22:0.47:2,0,0	1/1:26,0:26:9.96:187,10,0	0/1:25,0:24:52.38:52,0,342	1/1:3,9:12:6.02:209,6,0	1/1:11,0:11:24.73:204,25,0	1/1:8,0:8:15.11:76,15,0	0/0:21,0:21:36.04:0,36,487	0/0:20,0:20:50.53:0,51,693	1/1:4,10:17:3.01:52,3,0	0/0:24,0:24:7.20:0,7,524	0/0:27,0:27:8.83:0,9,551	0/0:24,0:24:42.12:0,42,418	0/0:24,0:24:29.81:0,30,339	1/1:11,0:8:2.03:69,2,0	0/1:7,0:7:1.87:49,0,2	1/1:22,0:22:13.13:129,13,0	0/0:11,0:11:12.43:0,12,156	0/0:8,0:8:20.98:0,21,251	0/0:34,0:34:65.68:0,66,871	1/1:5,0:5:2.97:20,3,0	1/1:20,0:20:27.90:219,28,0	1/1:13,0:12:6.02:137,6,0	0/0:6,0:5:2.94:0,3,18
chr10	53808483	.	TGTGA	T	1861.32	PASS	AB=0.987;AC=32;AF=0.571;AN=56;BaseQRankSum=-4.573;DP=512;FS=5.301;HRun=0;HaplotypeScore=154.2124;InbreedingCoeff=0.0519;MQ=47.46;MQ0=7;MQRankSum=0.522;QD=4.77;ReadPosRankSum=-5.414;VQSLOD=0.4719;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:46:33.72:0,34,736	0/0:7,0:7:9.33:0,9,126	0/1:25,0:9:21.73:22,0,163	0/1:31,0:11:33.77:34,0,165	1/1:12,0:12:3.01:48,3,0	1/1:20,0:20:2.96:19,3,0	1/1:25,0:25:13.59:253,14,0	0/1:23,0:22:31.88:32,0,39	0/0:11,0:11:5.82:0,6,53	1/1:12,0:12:16.04:260,16,0	1/1:8,0:8:18.02:230,18,0	0/1:21,0:21:0.61:1,0,252	0/1:20,0:20:29.60:30,0,431	0/0:16,0:16:2.65:0,3,24	0/1:24,0:24:55.84:56,0,256	0/1:27,0:27:14.42:14,0,310	0/1:24,0:24:86.02:86,0,117	0/1:24,0:24:30.59:97,0,31	0/1:9,2:8:10.31:68,0,10	1/1:5,2:7:6.02:95,6,0	1/1:21,1:22:17.28:264,17,0	0/1:10,0:10:1.64:2,0,19	0/0:8,0:8:7.83:0,8,132	0/0:33,0:33:16.58:0,17,454	1/1:5,0:5:3.01:44,3,0	1/1:20,0:20:21.36:364,21,0	0/1:13,0:12:6.48:10,0,6	1/1:6,0:5:0.47:1,0,0
chr10	53808484	.	G	GTGTGTCTC	2448.95	PASS	AB=1.000;AC=24;AF=0.429;AN=56;BaseQRankSum=-5.472;DP=520;FS=7.423;HRun=0;HaplotypeScore=190.0577;InbreedingCoeff=0.6909;MQ=48.74;MQ0=7;MQRankSum=-1.354;QD=12.89;ReadPosRankSum=-2.857;VQSLOD=1.5094;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:44:95.81:0,96,1587	0/0:8,0:8:18.02:0,18,254	0/0:24,0:9:25.71:0,26,359	0/0:34,0:14:3.12:0,3,258	1/1:11,0:11:2.99:24,3,0	0/1:19,0:19:0:0,0,0	0/1:26,0:26:58.70:81,0,59	0/0:22,0:21:8.37:0,8,570	1/1:11,0:11:5.85:123,6,0	1/1:13,0:13:34.82:537,35,0	1/1:8,0:8:18.04:231,18,0	0/0:20,0:20:38.54:0,39,698	0/0:20,0:20:36.18:0,36,911	1/1:15,0:15:3.01:37,3,0	0/0:24,0:24:2.34:0,2,749	0/0:26,0:26:26.74:0,27,796	0/0:24,0:24:30.48:0,30,637	0/0:24,0:24:27.90:0,28,420	1/1:12,0:9:14.37:194,14,0	1/1:7,0:7:6.02:121,6,0	1/1:24,0:25:17.23:289,17,0	0/0:10,0:10:14.91:0,15,240	0/0:8,0:8:21.06:0,21,339	0/0:35,0:35:71.63:0,72,1200	0/0:5,0:5:1.82:0,2,5	1/1:22,0:22:48.45:778,48,0	1/1:3,9:13:6.02:192,6,0	1/1:7,0:6:3.01:33,3,0
chr10	53808485	.	TGA	T	4500.82	PASS	AB=0.991;AC=43;AF=0.768;AN=56;BaseQRankSum=-6.650;DP=512;FS=2.033;HRun=0;HaplotypeScore=132.5196;InbreedingCoeff=-0.2275;MQ=49.10;MQ0=7;MQRankSum=-1.591;QD=8.91;ReadPosRankSum=-5.915;VQSLOD=3.5366;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:42,0:43:99:314,0,142	0/1:8,0:8:17.60:98,0,18	0/1:25,0:9:96.43:96,0,108	0/1:35,0:15:72.35:191,0,72	1/1:11,0:11:2.99:24,3,0	1/1:17,1:18:2.96:19,3,0	1/1:22,3:25:33.86:319,34,0	1/1:22,0:21:48.94:324,49,0	1/1:11,1:12:2.99:20,3,0	1/1:12,0:12:23.86:185,24,0	1/1:8,0:8:18.03:207,18,0	0/1:20,0:20:44.18:134,0,44	0/1:20,0:20:77.45:144,0,77	0/1:15,0:15:1.32:19,0,1	0/1:22,1:23:29.99:262,0,30	0/1:26,1:27:54.94:272,0,55	1/1:23,1:24:19.74:273,20,0	1/1:22,2:24:28.36:309,28,0	1/1:8,0:6:10.27:83,10,0	1/1:8,0:8:9.01:88,9,0	1/1:24,1:25:17.69:175,18,0	1/1:9,0:9:12.43:101,12,0	0/1:8,0:8:1.82:84,0,2	0/1:35,0:35:68.23:355,0,68	1/1:4,1:5:3.01:44,3,0	1/1:21,0:21:40.39:349,40,0	1/1:14,0:13:2.42:12,2,0	0/0:7,0:6:0.47:0,0,1
chr10	53808621	.	TAC	T	374.22	PASS	AB=0.963;AC=7;AF=0.125;AN=56;BaseQRankSum=-1.081;DP=566;FS=5.868;HRun=0;HaplotypeScore=96.7510;InbreedingCoeff=0.1537;MQ=59.84;MQ0=8;MQRankSum=-0.355;QD=3.04;ReadPosRankSum=-3.825;VQSLOD=0.4423;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:33:75.23:0,75,1163	0/1:9,0:9:3.65:4,0,247	0/0:30,0:18:20.35:0,20,210	0/0:29,0:17:25.54:0,26,239	0/0:10,0:10:15.05:0,15,243	0/0:15,0:15:21.06:0,21,337	0/1:21,1:21:21.34:21,0,465	1/1:18,5:23:33.07:383,33,0	0/1:14,1:15:15.60:16,0,246	0/0:8,0:19:30.91:0,31,227	0/0:7,0:10:6:0,6,53	0/0:17,1:18:5.50:0,5,555	0/0:17,0:17:45.15:0,45,687	0/0:21,0:21:27.09:0,27,420	0/0:18,0:18:9.68:0,10,618	0/0:20,0:20:38.80:0,39,629	0/0:33,0:32:45.99:0,46,677	0/0:18,0:18:38.61:0,39,543	0/0:11,0:16:17.46:0,17,159	0/0:2,0:5:6:0,6,53	0/0:19,0:44:31.54:0,32,282	0/0:14,0:14:30.09:0,30,455	0/0:6,0:6:9.03:0,9,136	0/1:30,0:29:8.37:8,0,769	0/1:22,2:24:70.62:71,0,445	0/0:8,0:29:37.36:0,37,249	0/0:6,0:20:15.46:0,15,130	0/0:8,0:9:16.14:0,16,142
chr10	53808648	.	ATG	A	566.11	PASS	AB=0.873;AC=6;AF=0.107;AN=56;BaseQRankSum=4.273;DP=567;FS=0.000;HRun=0;HaplotypeScore=110.3143;InbreedingCoeff=-0.1324;MQ=49.26;MQ0=13;MQRankSum=-4.334;QD=5.24;ReadPosRankSum=-0.905;VQSLOD=2.6870;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:33:93.30:0,93,1729	0/0:13,0:13:36.12:0,36,707	0/1:10,2:3:27.58:28,0,57	0/1:22,1:3:32.47:32,0,33	0/0:9,0:9:18.06:0,18,366	0/0:17,1:18:16.39:0,16,321	0/0:31,1:31:47.83:0,48,887	0/0:23,0:23:57.19:0,57,1019	0/0:18,1:19:28.21:0,28,322	0/0:16,0:15:28.02:0,28,714	0/0:7,0:7:5.73:0,6,120	0/0:18,0:18:44.41:0,44,906	0/0:14,0:14:39.13:0,39,766	0/0:24,0:24:32.25:0,32,475	0/0:18,0:18:44.97:0,45,867	0/0:22,0:22:50.84:0,51,1012	0/1:17,11:28:99:252,0,486	0/1:14,10:24:99:341,0,524	0/0:20,0:18:51.10:0,51,819	0/0:12,0:12:17.49:0,17,226	0/0:45,4:45:3.08:0,3,724	0/0:19,0:19:57.20:0,57,1078	0/0:13,0:13:36:0,36,699	0/0:36,0:33:81.05:0,81,1463	0/0:19,0:19:35.65:0,36,653	0/0:23,0:21:30.68:0,31,813	0/1:13,0:13:22.14:22,0,220	0/1:8,0:8:13.87:14,0,250
chr10	53808668	.	G	GCACACACA	2418.61	PASS	AB=0.912;AC=27;AF=0.482;AN=56;BaseQRankSum=7.210;DP=619;FS=0.473;HRun=0;HaplotypeScore=173.4079;InbreedingCoeff=0.5083;MQ=48.09;MQ0=16;MQRankSum=-6.389;QD=6.33;ReadPosRankSum=-4.740;VQSLOD=0.8647;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:32:74.76:0,75,1255	0/0:16,0:15:29.94:0,30,604	0/0:13,0:1:2.99:0,3,24	0/0:24,0:3:2.74:0,3,12	1/1:11,0:11:6.87:50,7,0	1/1:3,8:13:3.01:49,3,0	1/1:38,0:38:50.87:509,51,0	1/1:15,0:32:24.42:299,24,0	1/1:4,11:28:8.86:262,9,0	1/1:19,0:21:29.82:243,30,0	0/0:3,0:10:0:0,0,0	0/0:19,0:21:52.02:0,52,1142	0/0:12,0:13:29.17:0,29,492	1/1:3,22:28:0.47:1,0,0	0/0:14,0:15:21.30:0,21,266	0/0:21,0:23:26.64:0,27,522	0/1:21,0:26:0.41:0,0,524	0/1:25,0:26:20.01:20,0,628	0/1:16,0:16:28.53:129,0,29	0/1:6,0:11:44.81:68,0,45	0/1:53,0:52:75.02:184,0,75	0/0:18,0:18:35.84:0,36,818	0/0:14,0:14:30.07:0,30,622	0/0:33,0:33:48.43:0,48,1339	1/1:6,11:23:3.47:26,3,0	1/1:24,1:25:19.69:480,20,0	1/1:14,0:14:19.22:179,19,0	1/1:8,0:8:12.58:108,13,0
chr10	53810123	.	A	AC	11769.06	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=17.978;DP=673;FS=1.269;HRun=3;HaplotypeScore=86.6500;InbreedingCoeff=0.9997;MQ=92.37;MQ0=0;MQRankSum=-3.694;QD=35.77;ReadPosRankSum=2.099;VQSLOD=5.3426;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:81.23:0,81,959	0/0:11,0:11:33.10:0,33,396	0/0:25,0:25:71.76:0,72,810	0/0:32,0:32:86.83:0,87,969	1/1:2,24:26:69.19:927,69,0	1/1:2,14:16:42.14:578,42,0	1/1:2,25:27:57.19:785,57,0	0/0:22,0:22:57.13:0,57,675	1/1:0,26:26:60.20:826,60,0	1/1:0,31:31:91.47:1189,91,0	1/1:2,22:24:57.19:784,57,0	0/0:25,0:25:69.20:0,69,813	0/0:25,0:25:75.17:0,75,870	1/1:2,27:29:81.24:1087,81,0	0/0:34,0:34:99:0,102,1213	0/0:32,0:32:87.25:0,87,1032	0/0:35,0:34:90.27:0,90,1079	0/0:13,0:13:39.12:0,39,466	1/1:0,23:23:69.21:932,69,0	1/1:1,23:24:63.17:841,63,0	1/1:1,19:20:54.18:746,54,0	0/0:22,0:22:66.20:0,66,792	0/0:15,0:15:45.14:0,45,540	0/0:24,0:24:60.17:0,60,707	1/1:0,21:21:54.18:743,54,0	1/1:2,31:33:60.27:1212,60,0	1/1:1,20:21:57.19:784,57,0	1/1:0,8:8:24.08:334,24,0
chr10	53811165	.	AT	A	5889.32	PASS	AB=0.978;AC=30;AF=0.536;AN=56;BaseQRankSum=2.558;DP=652;FS=11.038;HRun=10;HaplotypeScore=91.0142;InbreedingCoeff=0.8523;MQ=75.17;MQ0=2;MQRankSum=-4.516;QD=16.18;ReadPosRankSum=3.683;VQSLOD=4.4738;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,105,1038	0/0:13,0:13:27.04:0,27,281	0/0:32,0:25:31.46:0,31,286	0/1:21,1:21:45.23:45,0,139	1/1:0,23:23:50.84:426,51,0	1/1:2,29:32:65.02:553,65,0	1/1:5,18:23:50.98:442,51,0	0/1:26,0:26:16.35:146,0,16	1/1:3,23:26:47.97:416,48,0	1/1:2,24:26:70.99:580,71,0	1/1:0,6:6:11.99:104,12,0	0/0:26,3:30:39.61:0,40,593	0/0:17,0:17:45.05:0,45,462	1/1:1,22:24:53.98:468,54,0	0/0:18,0:19:47.79:0,48,439	0/0:15,0:17:47.77:0,48,471	0/0:11,0:31:65.87:0,66,351	0/0:9,0:14:38.07:0,38,257	1/1:9,12:21:50.93:430,51,0	1/1:2,19:21:47.97:416,48,0	1/1:3,19:22:26.99:234,27,0	0/0:19,0:19:45.09:0,45,468	0/0:20,0:20:50.79:0,51,512	0/0:35,1:36:57.98:0,58,811	1/1:2,21:23:50.95:436,51,0	1/1:5,29:35:49.76:628,50,0	1/1:5,21:26:47.91:408,48,0	1/1:0,8:8:18:156,18,0
chr10	53811474	.	CT	C	238.91	PASS	AB=0.917;AC=5;AF=0.089;AN=56;BaseQRankSum=-3.079;DP=473;FS=5.776;HRun=1;HaplotypeScore=101.9134;InbreedingCoeff=0.8303;MQ=72.81;MQ0=0;MQRankSum=1.510;QD=6.83;ReadPosRankSum=-3.652;VQSLOD=-0.7374;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:59.84:0,60,622	0/0:9,0:9:23.25:0,23,246	0/0:17,1:15:17.57:0,18,228	0/0:14,0:11:17.14:0,17,191	0/0:16,0:16:37.47:0,37,180	0/0:20,0:20:41.84:0,42,181	0/0:30,0:30:73.71:0,74,395	0/0:15,0:15:35.89:0,36,310	0/0:9,0:9:18.47:0,18,94	0/0:23,0:23:49.97:0,50,326	0/0:6,0:6:16.39:0,16,79	0/0:22,0:22:44.63:0,45,457	0/0:15,0:15:42.11:0,42,498	0/0:29,0:29:64.76:0,65,273	0/0:20,0:20:54.07:0,54,610	0/0:15,0:15:45.07:0,45,527	1/1:13,1:14:32.21:242,32,0	1/1:9,1:10:18.68:116,19,0	0/0:13,0:13:29.04:0,29,176	0/0:19,0:19:50.22:0,50,265	0/0:26,0:26:44.38:0,44,237	0/1:10,1:11:1.08:1,0,223	0/0:8,0:8:13.54:0,14,181	0/0:17,0:17:45.06:0,45,517	0/0:12,0:12:19.54:0,20,113	0/0:31,0:31:73.05:0,73,446	0/0:16,0:16:35.11:0,35,160	0/0:6,0:6:16.35:0,16,79
chr10	53811475	.	TCCC	T	7401.57	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=10.138;DP=472;FS=32.906;HRun=11;HaplotypeScore=92.4996;InbreedingCoeff=0.9885;MQ=73.70;MQ0=0;MQRankSum=-2.911;QD=29.49;ReadPosRankSum=8.183;VQSLOD=1.1163;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:28:42.05:0,42,694	0/0:9,0:9:18.06:0,18,340	0/0:18,0:15:32.92:0,33,386	0/0:16,0:13:26.56:0,27,291	1/1:0,16:16:36.09:469,36,0	1/1:0,20:20:48.16:630,48,0	1/1:6,23:29:63.18:824,63,0	0/0:6,0:15:22.32:0,22,352	1/1:1,8:9:21.07:276,21,0	1/1:1,20:21:51.15:669,51,0	1/1:1,5:6:16.60:201,17,0	0/0:20,0:22:27.06:0,27,512	0/0:16,0:16:42.11:0,42,739	1/1:0,29:29:75.24:985,75,0	0/0:20,0:20:51.17:0,51,1007	0/0:15,0:15:42.14:0,42,833	0/0:16,0:16:33.06:0,33,471	0/0:10,0:10:19.62:0,20,330	1/1:3,10:13:29.96:354,30,0	1/1:2,17:19:45.14:590,45,0	1/1:2,23:25:39.12:512,39,0	0/0:11,0:11:30.07:0,30,482	0/0:7,0:8:15.03:0,15,242	0/0:17,0:17:39.12:0,39,753	1/1:2,9:11:15.02:197,15,0	1/1:6,25:31:75.23:983,75,0	1/1:0,16:16:39.13:512,39,0	1/1:1,5:6:15.04:197,15,0
chr10	53812152	.	AC	A	598.44	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.906;DP=646;FS=21.140;HRun=5;HaplotypeScore=64.0955;InbreedingCoeff=0.9953;MQ=80.25;MQ0=0;MQRankSum=0.741;QD=27.20;ReadPosRankSum=-3.865;VQSLOD=1.1416;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,150,2019	0/0:8,0:8:21.05:0,21,257	0/0:19,0:19:37.82:0,38,556	0/0:12,0:12:32.36:0,32,390	0/0:21,0:21:57.18:0,57,763	0/0:21,0:21:57.19:0,57,780	0/0:29,0:29:81.25:0,81,1088	1/1:0,22:22:63.15:693,63,0	0/0:31,0:31:93.31:0,93,1271	0/0:19,0:19:54.17:0,54,718	0/0:13,0:13:36.11:0,36,477	0/0:26,0:26:75.25:0,75,1020	0/0:26,0:26:75.25:0,75,1024	0/0:19,0:19:57.17:0,57,745	0/0:20,0:20:57.17:0,57,765	0/0:23,0:23:66.18:0,66,856	0/0:38,0:38:99:0,114,1540	0/0:30,0:30:90.24:0,90,1174	0/0:20,0:20:57.19:0,57,777	0/0:22,0:22:60.20:0,60,819	0/0:35,0:35:90.25:0,90,1189	0/0:17,0:17:51.16:0,51,679	0/0:21,0:21:60.19:0,60,802	0/0:22,0:22:66.20:0,66,885	0/0:23,0:22:66.18:0,66,867	0/0:20,0:20:54.17:0,54,721	0/0:22,0:22:57.09:0,57,746	0/0:13,0:13:36.12:0,36,492
chr10	53812931	.	T	TTAAACAAACAAA	36422.08	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=4.535;DP=837;FS=10.399;HRun=0;HaplotypeScore=250.5538;InbreedingCoeff=0.9892;MQ=69.03;MQ0=0;MQRankSum=-15.837;QD=73.28;ReadPosRankSum=-4.654;VQSLOD=2.5088;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,129,3879	0/0:17,0:17:51.07:0,51,1588	0/0:29,0:27:67.50:0,67,1314	0/0:32,0:31:90.01:0,90,1804	1/1:8,0:41:83.76:1771,84,0	1/1:4,0:27:54.18:1574,54,0	1/1:5,0:24:32.70:931,33,0	1/1:54,0:54:99:3802,162,0	1/1:4,0:35:63.22:1891,63,0	1/1:14,23:41:98.93:4465,99,0	1/1:14,9:23:68.91:2511,69,0	0/0:34,0:34:99:0,102,3210	0/0:36,0:36:99:0,108,3269	1/1:5,0:38:80.86:2346,81,0	0/0:43,0:43:99:0,129,4100	0/0:27,0:27:81.21:0,81,2663	1/1:10,1:29:27.09:1275,27,0	1/1:16,0:16:41.76:750,42,0	1/1:4,8:18:54.03:1539,54,0	1/1:6,20:33:88.96:3722,89,0	1/1:5,9:17:15.05:862,15,0	0/0:27,0:27:81.16:0,81,2300	0/0:24,0:24:63.11:0,63,1832	0/0:28,0:28:84.14:0,84,2804	1/1:2,0:29:42.14:1264,42,0	1/1:6,26:37:98.40:4706,98,0	1/1:2,25:28:39.13:2464,39,0	1/1:1,3:7:9.03:549,9,0
chr10	53814761	.	G	GGGA	21182.26	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=20.529;DP=752;FS=3.155;HRun=0;HaplotypeScore=148.9810;InbreedingCoeff=0.9952;MQ=77.29;MQ0=0;MQRankSum=-6.443;QD=55.45;ReadPosRankSum=2.181;VQSLOD=6.5961;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:62,0:62:99:0,175,3199	0/0:12,0:12:36.12:0,36,671	0/0:26,0:26:69.10:0,69,1196	0/0:20,0:20:54.18:0,54,981	1/1:0,19:20:45.15:1007,45,0	1/1:4,18:23:65.38:1393,65,0	1/1:0,16:18:45.11:973,45,0	1/1:1,19:23:61.55:1306,62,0	1/1:0,26:27:75.26:1696,75,0	1/1:0,29:31:90.30:1944,90,0	1/1:0,10:11:24.08:535,24,0	0/0:43,0:43:99:0,129,2391	0/0:34,0:34:99:0,102,1825	1/1:0,39:43:99:2508,111,0	0/0:51,0:51:99:0,144,2669	0/0:49,0:49:99:0,147,2702	1/1:0,25:27:66.09:1408,66,0	1/1:0,18:18:44.98:928,45,0	1/1:0,8:11:33.11:685,33,0	1/1:0,20:20:51.18:1164,51,0	1/1:0,35:38:66.18:1457,66,0	0/0:16,0:16:45.15:0,45,816	0/0:28,0:28:81.26:0,81,1463	0/0:29,0:29:84.29:0,84,1566	1/1:2,17:19:52.94:1173,53,0	1/1:1,20:23:64.61:1383,65,0	1/1:0,21:23:60.21:1352,60,0	1/1:0,5:7:12.04:272,12,0
chr10	53817702	.	AAC	A	1084.33	PASS	AB=0.873;AC=18;AF=0.360;AN=50;BaseQRankSum=0.955;DP=584;FS=3.807;HRun=0;HaplotypeScore=97.7099;InbreedingCoeff=0.2497;MQ=71.30;MQ0=20;MQRankSum=-0.437;QD=4.95;ReadPosRankSum=0.706;VQSLOD=2.7407;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:40,2:43:9.31:0,9,525	0/1:3,2:5:17.19:56,0,17	./.	./.	1/1:14,9:23:26.90:276,27,0	0/1:11,3:16:3.51:96,0,4	1/1:11,8:22:32.59:303,33,0	./.	1/1:15,2:18:11.86:112,12,0	0/0:16,0:18:29.43:0,29,242	0/0:8,0:18:8.04:0,8,58	1/1:8,2:10:6.49:66,6,0	0/1:14,0:16:11.34:11,0,121	1/1:10,4:15:17.88:178,18,0	0/1:16,2:18:8.66:9,0,286	0/1:19,1:20:21.10:21,0,316	0/0:15,0:20:12.01:0,12,124	0/0:12,0:17:11.82:0,12,115	0/0:13,0:13:8.87:0,9,73	0/0:9,0:15:11.04:0,11,84	0/0:25,0:36:15.01:0,15,146	0/0:19,1:20:0.34:0,0,367	0/1:11,2:13:14.67:15,0,203	0/1:24,1:25:31.20:31,0,220	0/1:11,1:14:24.74:78,0,25	0/0:14,0:23:36.12:0,36,309	0/0:12,0:21:21.47:0,21,205	0/0:21,0:22:11.93:0,12,101
chr10	53818404	.	C	CAT	1507.58	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-8.503;DP=831;FS=0.638;HRun=0;HaplotypeScore=95.7215;InbreedingCoeff=0.9960;MQ=87.97;MQ0=0;MQRankSum=-0.899;QD=34.26;ReadPosRankSum=-5.730;VQSLOD=3.6641;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,114,1482	0/0:15,0:15:42.14:0,42,546	0/0:37,0:37:86.04:0,86,1041	0/0:28,0:28:68.54:0,69,825	0/0:33,0:33:78.23:0,78,986	0/0:37,0:37:93.27:0,93,1187	0/0:28,0:28:72.22:0,72,922	1/1:10,32:44:99:1602,102,0	0/0:33,0:33:81.22:0,81,1008	0/0:27,0:27:78.25:0,78,1002	0/0:23,1:24:21.18:0,21,827	0/0:34,0:34:99:0,99,1273	0/0:38,0:38:99:0,102,1326	0/0:30,0:30:78.25:0,78,1015	0/0:37,0:37:99:0,102,1312	0/0:31,0:31:84.27:0,84,1093	0/0:20,0:20:57.17:0,57,727	0/0:27,0:27:69.15:0,69,858	0/0:21,0:21:60.19:0,60,768	0/0:33,0:33:90.29:0,90,1170	0/0:38,0:38:99:0,102,1293	0/0:22,0:22:60.20:0,60,780	0/0:20,0:20:51.15:0,51,649	0/0:36,0:36:90.28:0,90,1156	0/0:21,0:21:63.20:0,63,819	0/0:32,0:32:81.26:0,81,1054	0/0:28,0:28:72.22:0,72,921	0/0:13,0:13:39.13:0,39,507
chr10	53818489	.	TAC	T	4964.10	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=13.166;DP=821;FS=0.720;HRun=0;HaplotypeScore=104.3539;InbreedingCoeff=0.9269;MQ=61.82;MQ0=4;MQRankSum=1.781;QD=23.09;ReadPosRankSum=2.236;VQSLOD=5.6352;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:81.28:0,81,1320	0/0:11,0:11:27.09:0,27,430	0/0:43,0:30:44.83:0,45,651	0/0:45,0:26:27.87:0,28,528	1/1:7,25:31:63.20:775,63,0	1/1:7,26:33:66.21:812,66,0	1/1:6,18:24:34.35:409,34,0	1/1:19,22:41:67.07:790,67,0	1/1:5,25:30:72.23:886,72,0	0/0:27,0:27:75.14:0,75,1171	0/0:20,0:20:54.17:0,54,854	0/0:36,0:36:99:0,99,1610	0/0:20,0:20:48.16:0,48,781	1/1:4,19:23:45.14:554,45,0	0/0:32,1:33:41.34:0,41,1170	0/0:18,0:18:45.14:0,45,701	0/0:20,0:20:38.96:0,39,601	0/0:25,1:26:6.62:0,7,668	0/0:19,1:18:2.20:0,2,527	0/0:31,0:31:84.25:0,84,1314	0/0:64,0:64:99:0,141,2186	0/0:22,1:23:14.17:0,14,746	0/0:27,0:27:72.22:0,72,1123	0/0:36,0:36:96.29:0,96,1514	1/1:4,28:32:60.19:738,60,0	0/0:33,0:33:89.87:0,90,1359	0/0:31,0:31:81.28:0,81,1314	0/0:6,0:5:6.02:0,6,97
chr10	53819258	.	C	CCTTCTCCCAGA	2250.31	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-0.397;DP=376;FS=17.743;HRun=0;HaplotypeScore=117.3900;InbreedingCoeff=0.8166;MQ=99.51;MQ0=0;MQRankSum=-4.973;QD=97.84;ReadPosRankSum=-3.293;VQSLOD=2.0020;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:66.23:0,66,2158	0/0:4,0:4:12.04:0,12,361	0/0:24,0:24:63.20:0,63,1874	0/0:17,0:17:39.11:0,39,1145	0/0:13,0:13:36.12:0,36,1177	0/0:10,0:10:27.09:0,27,894	0/0:14,0:14:33.11:0,33,1092	1/1:17,2:23:54.17:2345,54,0	0/0:13,0:13:39.12:0,39,1238	0/0:16,0:16:39.13:0,39,1304	0/0:15,0:15:42.13:0,42,1375	0/0:14,0:14:39.13:0,39,1279	0/0:15,0:15:45.15:0,45,1562	0/0:14,0:14:39.13:0,39,1301	0/0:9,0:9:24.08:0,24,833	0/0:15,0:15:42.14:0,42,1438	0/0:15,0:15:42.12:0,42,1321	0/0:7,0:7:21.03:0,21,645	0/0:11,0:11:30.10:0,30,918	0/0:10,0:10:30.10:0,30,1005	0/0:24,0:24:63.22:0,63,1974	0/0:12,0:12:36.10:0,36,1094	0/0:8,0:8:21.06:0,21,595	0/0:14,0:14:42.14:0,42,1426	0/0:4,0:4:3.01:0,3,104	0/0:13,0:13:39.05:0,39,1264	0/0:13,0:13:36.12:0,36,1224	0/0:7,0:7:21.04:0,21,647
chr10	53821625	.	C	CA	2354.18	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-7.701;DP=685;FS=0.945;HRun=8;HaplotypeScore=67.8987;InbreedingCoeff=0.9888;MQ=81.95;MQ0=0;MQRankSum=-2.189;QD=27.37;ReadPosRankSum=-1.513;VQSLOD=3.6505;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:71.47:0,71,827	0/0:14,0:14:36.02:0,36,329	0/0:21,0:21:48.56:0,49,403	0/0:21,0:21:40.09:0,40,332	0/0:40,0:39:93.01:0,93,847	0/0:18,0:18:45.02:0,45,412	0/0:22,0:22:66.04:0,66,604	1/1:6,25:31:75.18:835,75,0	0/0:20,0:20:48:0,48,434	0/0:31,0:31:83.84:0,84,754	0/0:19,0:19:54:0,54,488	0/0:29,0:29:72.03:0,72,659	0/0:27,0:27:75.04:0,75,686	0/0:21,0:21:57.02:0,57,521	0/0:21,0:21:57.02:0,57,521	0/0:28,0:28:77.99:0,78,699	1/1:2,26:28:69.21:796,69,0	1/1:1,26:27:75.22:866,75,0	0/0:13,0:13:33.01:0,33,302	0/0:25,0:25:72.04:0,72,659	0/0:28,0:28:78.03:0,78,714	0/0:31,0:31:81.04:0,81,741	0/0:28,0:28:75.01:0,75,680	0/0:16,0:16:45.02:0,45,412	0/0:27,0:27:75.04:0,75,686	0/0:31,0:31:81.02:0,81,734	0/0:26,0:26:72:0,72,649	0/0:5,0:5:11.96:0,12,99
chr10	53822057	.	AT	A	5580.80	PASS	AB=0.833;AC=29;AF=0.518;AN=56;BaseQRankSum=8.747;DP=607;FS=0.000;HRun=11;HaplotypeScore=64.1429;InbreedingCoeff=0.9220;MQ=73.49;MQ0=2;MQRankSum=-1.980;QD=17.94;ReadPosRankSum=1.858;VQSLOD=5.8264;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,1:45:92.65:0,93,1189	0/1:4,1:5:12.61:13,0,84	0/0:16,0:13:14.37:0,14,118	0/0:10,0:6:9.44:0,9,81	1/1:6,27:33:48.78:597,49,0	1/1:1,14:16:35:277,35,0	1/1:5,14:19:35.94:296,36,0	0/0:17,0:36:75.03:0,75,467	1/1:2,26:28:44.78:518,45,0	1/1:3,15:19:45.30:355,45,0	1/1:3,13:16:35.94:296,36,0	0/0:20,1:21:38.52:0,39,614	0/0:26,0:26:71.85:0,72,746	1/1:4,12:16:29.96:246,30,0	0/0:19,0:19:48.12:0,48,512	0/0:20,1:21:32.50:0,32,551	0/0:21,0:21:59.77:0,60,622	0/0:24,0:24:51.10:0,51,533	1/1:3,18:21:53.91:437,54,0	1/1:3,28:31:74.75:602,75,0	1/1:6,23:29:59.92:493,60,0	0/0:17,0:17:48.12:0,48,510	0/0:18,0:18:39.10:0,39,414	0/0:20,0:22:53.98:0,54,548	1/1:4,14:20:40.01:307,40,0	1/1:0,19:19:56.94:468,57,0	1/1:5,22:28:58.94:473,59,0	1/1:2,8:11:26:203,26,0
chr10	53823558	.	A	AT	13699.92	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-14.564;DP=598;FS=6.439;HRun=5;HaplotypeScore=51.2662;InbreedingCoeff=0.9996;MQ=75.01;MQ0=0;MQRankSum=-2.564;QD=33.99;ReadPosRankSum=1.371;VQSLOD=5.1474;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:78.12:0,78,809	0/0:10,0:10:27.07:0,27,290	0/0:14,0:14:32.95:0,33,316	0/0:11,0:11:27.03:0,27,269	1/1:2,18:20:51.17:670,51,0	1/1:1,20:21:54.18:710,54,0	1/1:2,15:17:42.14:553,42,0	1/1:2,18:20:54.12:652,54,0	1/1:2,24:26:57.19:750,57,0	1/1:2,25:27:75.23:973,75,0	1/1:2,22:24:63.20:818,63,0	0/0:20,0:20:54.13:0,54,574	0/0:23,0:23:63.09:0,63,644	1/1:7,16:23:45.15:590,45,0	0/0:22,0:22:60.14:0,60,636	0/0:14,0:14:39.08:0,39,411	1/1:1,40:40:99:1458,111,0	1/1:0,26:26:75.24:987,75,0	1/1:6,31:37:93.26:1163,93,0	1/1:1,25:26:75.24:984,75,0	1/1:0,13:13:33.11:434,33,0	0/0:19,0:19:57.14:0,57,612	0/0:19,0:19:51.11:0,51,539	0/0:15,0:15:45.11:0,45,483	1/1:2,21:23:57.19:750,57,0	1/1:1,23:24:69.22:907,69,0	1/1:1,22:23:63.20:828,63,0	1/1:0,12:11:36.12:474,36,0
chr10	53823931	.	CA	C	4142.24	PASS	AB=0.672;AC=34;AF=0.607;AN=56;BaseQRankSum=7.065;DP=555;FS=1.699;HRun=13;HaplotypeScore=67.5292;InbreedingCoeff=0.5735;MQ=66.75;MQ0=1;MQRankSum=-2.151;QD=10.49;ReadPosRankSum=1.552;VQSLOD=3.3488;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,22:29:0.93:297,1,0	0/0:9,0:9:20.83:0,21,188	0/0:10,0:8:8.49:0,8,51	0/0:5,0:5:5.87:0,6,39	1/1:4,18:23:0.31:319,0,0	0/1:7,11:18:14.40:203,0,14	0/1:6,13:19:11.77:220,0,12	1/1:4,0:25:38.94:114,39,0	1/1:7,16:23:23.55:304,24,0	1/1:7,12:21:26.41:254,26,0	1/1:3,20:23:53.63:394,54,0	0/0:9,0:10:20.85:0,21,181	0/0:21,0:27:50.90:0,51,473	1/1:4,11:16:5.66:194,6,0	0/0:26,1:28:50.01:0,50,617	0/0:16,1:22:25.67:0,26,366	1/1:1,0:29:46.46:137,46,0	1/1:3,0:25:42.76:125,43,0	1/1:7,13:20:12.48:248,12,0	0/1:4,7:11:11.36:91,0,11	1/1:3,15:18:44.71:328,45,0	0/1:15,2:19:4.86:5,0,287	0/0:19,0:22:44.70:0,45,389	0/0:22,2:26:22.02:0,22,500	1/1:4,15:19:12.58:255,13,0	1/1:6,16:23:17.48:283,17,0	1/1:8,13:23:7.66:201,8,0	1/1:2,9:11:0.65:168,1,0
chr10	53824583	.	AACACAC	A	3838.92	PASS	AB=0.636;AC=20;AF=0.370;AN=54;BaseQRankSum=9.096;DP=550;FS=0.000;HRun=0;HaplotypeScore=126.2527;InbreedingCoeff=0.7399;MQ=60.38;MQ0=11;MQRankSum=-5.684;QD=19.59;ReadPosRankSum=2.312;VQSLOD=2.8503;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:28:39.01:0,39,897	./.	0/0:35,0:19:18.06:0,18,464	0/0:18,0:6:3.01:0,3,46	1/1:6,1:15:6.20:12,6,0	0/0:21,0:24:45.15:0,45,1325	0/0:24,0:26:42.14:0,42,1289	0/0:29,0:29:36.94:0,37,634	0/1:8,1:21:8.10:64,0,8	1/1:6,7:13:21.04:361,21,0	1/1:2,4:6:9.03:187,9,0	0/0:16,0:17:36.12:0,36,1032	0/0:17,0:17:33.11:0,33,992	0/1:8,0:17:4.55:5,0,73	0/0:11,0:12:27.09:0,27,857	0/0:24,0:26:59.46:0,59,1911	0/0:13,0:31:42.11:0,42,984	0/0:9,0:16:19.26:0,19,290	1/1:10,11:23:36.08:663,36,0	1/1:4,11:15:23.88:367,24,0	1/1:18,2:20:1.56:3,2,0	0/0:4,0:8:12.04:0,12,352	0/0:11,0:12:27.09:0,27,810	0/0:30,0:30:48.12:0,48,1440	0/0:7,1:18:0.50:0,0,37	1/1:14,19:32:51.15:1013,51,0	1/1:6,15:24:47.89:977,48,0	1/1:4,3:7:9.03:187,9,0
chr10	53826093	.	A	AAC	1520.94	PASS	AB=0.840;AC=31;AF=0.620;AN=50;BaseQRankSum=2.089;DP=572;FS=2.651;HRun=0;HaplotypeScore=98.7566;InbreedingCoeff=0.3716;MQ=57.91;MQ0=22;MQRankSum=0.255;QD=4.21;ReadPosRankSum=-1.062;VQSLOD=2.6819;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:30:3.31:0,3,14	0/0:3,0:3:6:0,6,56	./.	./.	1/1:11,4:15:15.02:198,15,0	0/1:13,8:22:26.12:38,0,26	1/1:20,5:26:3.48:46,3,0	1/1:32,0:32:2.84:14,3,0	0/1:10,6:18:23.10:79,0,23	./.	1/1:12,0:19:6.01:59,6,0	0/0:12,0:14:10.84:0,11,76	0/0:15,0:16:14.79:0,15,113	1/1:16,0:16:11.91:105,12,0	0/1:12,0:11:9.48:9,0,77	0/0:24,0:26:23.60:0,24,208	1/1:38,1:37:33.81:294,34,0	1/1:24,0:24:5.97:47,6,0	1/1:18,0:18:5.97:62,6,0	1/1:13,0:17:8.04:58,8,0	1/1:18,0:18:11.80:264,12,0	0/1:16,0:17:23.25:23,0,144	0/0:9,0:8:6:0,6,57	0/0:23,0:25:23.68:0,24,202	0/1:14,4:20:17.06:77,0,17	1/1:19,0:19:17.43:155,17,0	1/1:19,0:19:7.67:133,8,0	1/1:6,0:6:7.22:33,7,0
chr10	53827054	.	TTATATC	T	1193.87	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.675;DP=666;FS=1.827;HRun=0;HaplotypeScore=133.6701;InbreedingCoeff=0.9981;MQ=82.79;MQ0=0;MQRankSum=-4.228;QD=51.91;ReadPosRankSum=-3.553;VQSLOD=3.1162;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:93.32:0,93,3212	0/0:10,0:10:30.10:0,30,1052	0/0:23,0:23:60.15:0,60,1837	0/0:18,0:18:45.10:0,45,1357	0/0:35,0:35:99:0,99,3286	0/0:20,0:20:60.19:0,60,2022	0/0:17,0:17:48.15:0,48,1444	1/1:2,21:23:63.15:1289,63,0	0/0:30,0:30:84.27:0,84,2721	0/0:33,0:33:90.78:0,91,3135	0/0:23,0:23:69.22:0,69,2313	0/0:18,0:18:51.18:0,51,1741	0/0:30,0:30:81.28:0,81,2745	0/0:20,0:20:51.16:0,51,1662	0/0:27,0:27:75.26:0,75,2524	0/0:23,0:23:60.19:0,60,1926	0/0:17,0:17:48.16:0,48,1680	0/0:14,0:14:33.11:0,33,1131	0/0:15,0:15:39.12:0,39,1105	0/0:33,0:33:96.33:0,96,3321	0/0:16,0:16:42.13:0,42,1392	0/0:34,0:34:99:0,99,3291	0/0:31,0:31:84.29:0,84,2871	0/0:12,0:12:27.09:0,27,899	0/0:28,0:28:81.26:0,81,2736	0/0:24,0:24:69.22:0,69,2265	0/0:40,0:40:99:0,111,3685	0/0:18,0:18:54.19:0,54,1846
chr10	53828339	.	A	ATGTGTGTGTGTG	3691.32	PASS	AB=1.000;AC=29;AF=0.537;AN=54;BaseQRankSum=3.449;DP=747;FS=39.890;HRun=0;HaplotypeScore=264.1833;InbreedingCoeff=0.3417;MQ=62.74;MQ0=13;MQRankSum=-5.480;QD=8.45;ReadPosRankSum=-7.129;VQSLOD=-0.6255;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:50:30.20:0,30,936	0/0:8,0:8:14.79:0,15,370	./.	0/0:43,0:23:2.97:0,3,20	1/1:26,0:26:0.09:119,0,0	1/1:26,0:26:12.01:286,12,0	1/1:15,0:14:2.99:24,3,0	1/1:37,0:37:12.95:323,13,0	0/1:18,0:17:77.56:240,0,78	1/1:28,0:27:43.14:557,43,0	0/1:18,0:18:25.60:26,0,132	0/0:20,0:23:26.33:0,26,738	0/0:27,0:27:9.28:0,9,964	1/1:26,0:25:5.67:123,6,0	0/0:35,0:39:54.06:0,54,1840	0/0:34,0:34:50.87:0,51,1313	1/1:17,6:26:6.02:287,6,0	1/1:19,0:17:12.01:300,12,0	0/1:24,0:24:60.26:252,0,60	1/1:24,0:24:5.97:74,6,0	0/1:36,0:36:7.11:316,0,7	0/0:17,0:17:27.08:0,27,642	0/0:26,0:26:8.28:0,8,517	0/1:29,0:32:17.53:18,0,640	1/1:19,0:18:9:222,9,0	1/1:26,0:26:40.94:419,41,0	0/1:26,0:25:20.90:90,0,21	0/1:10,0:10:4.54:17,0,5
chr10	53833085	.	CA	C	16243.41	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=16.572;DP=702;FS=0.000;HRun=1;HaplotypeScore=74.8538;InbreedingCoeff=0.9997;MQ=81.75;MQ0=0;MQRankSum=-2.193;QD=39.62;ReadPosRankSum=3.862;VQSLOD=5.4031;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:72.25:0,72,1151	0/0:10,0:10:30.10:0,30,480	0/0:17,0:17:34.36:0,34,476	0/0:20,0:20:26.43:0,26,456	1/1:1,23:24:72.20:984,72,0	1/1:0,22:22:60.20:838,60,0	1/1:0,30:30:78.26:1090,78,0	0/0:39,0:39:99:0,117,1812	1/1:0,24:24:69.23:964,69,0	1/1:0,29:29:87.23:1148,87,0	1/1:0,17:17:45.15:628,45,0	0/0:25,0:25:75.26:0,75,1199	0/0:27,0:27:81.26:0,81,1270	1/1:0,17:17:48.16:671,48,0	0/0:31,0:31:93.30:0,93,1463	0/0:28,0:27:81.28:0,81,1291	1/1:0,28:28:78.26:1090,78,0	1/1:0,22:22:63.21:880,63,0	1/1:0,27:27:81.25:1112,81,0	1/1:0,33:33:92.89:1241,93,0	1/1:0,19:19:54.14:732,54,0	0/0:18,0:18:54.18:0,54,861	0/0:25,0:25:72.23:0,72,1128	0/0:27,0:27:81.28:0,81,1295	1/1:0,33:33:96.32:1338,96,0	1/1:0,32:32:96.23:1309,96,0	1/1:0,38:38:99:1591,114,0	1/1:0,15:15:45.15:628,45,0
chr10	53834652	.	AAAAGATAACATTGTTGC	A	1093.62	PASS	AB=0.625;AC=3;AF=0.054;AN=56;BaseQRankSum=4.954;DP=624;FS=7.184;HRun=0;HaplotypeScore=271.2518;InbreedingCoeff=0.6176;MQ=89.86;MQ0=0;MQRankSum=-4.983;QD=39.06;ReadPosRankSum=1.683;VQSLOD=1.9241;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:45.15:0,45,2757	0/0:12,0:12:30.10:0,30,1914	0/0:23,0:23:42.12:0,42,2163	0/0:25,0:25:50.91:0,51,2526	0/0:21,0:21:54.19:0,54,4023	0/0:26,0:26:66.23:0,66,5082	0/0:17,0:17:39.05:0,39,2669	0/0:38,0:38:69.23:0,69,3689	0/0:21,0:21:45.15:0,45,3394	0/0:37,0:37:87.29:0,87,5829	0/0:28,0:28:72.23:0,72,4236	0/0:22,0:22:60.18:0,60,4198	0/0:25,0:25:66.21:0,66,4604	0/0:15,0:15:33.10:0,33,1849	0/0:25,0:25:57.20:0,57,4266	0/0:20,0:20:48.16:0,48,3140	0/1:6,9:15:99:629,0,465	1/1:5,8:13:12.04:565,12,0	0/0:17,0:17:33.10:0,33,2027	0/0:29,0:29:66.22:0,66,4433	0/0:22,0:22:51.13:0,51,3573	0/0:26,0:26:60.21:0,60,4490	0/0:27,0:27:63.22:0,63,4100	0/0:16,0:16:33.07:0,33,1918	0/0:24,0:24:51.18:0,51,3404	0/0:25,0:25:63.22:0,63,4250	0/0:27,0:26:72.23:0,72,4441	0/0:9,0:9:21.07:0,21,1569
chr10	53834696	.	CCTCTCT	C	648.36	PASS	AB=0.966;AC=20;AF=0.400;AN=50;BaseQRankSum=5.433;DP=533;FS=0.000;HRun=0;HaplotypeScore=119.5130;InbreedingCoeff=0.3921;MQ=69.87;MQ0=9;MQRankSum=-1.976;QD=3.04;ReadPosRankSum=0.328;VQSLOD=2.2291;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:9.02:0,9,104	0/0:6,0:6:5.75:0,6,51	./.	./.	0/0:17,4:21:2.97:0,3,20	0/1:22,0:23:5.04:93,0,5	1/1:15,0:15:8.93:74,9,0	./.	1/1:11,5:16:1.24:3,1,0	0/0:20,0:20:2.99:0,3,24	1/1:19,0:19:11.97:122,12,0	0/0:24,0:23:12.04:0,12,307	0/0:24,0:23:18.01:0,18,377	0/0:14,1:15:2.94:0,3,18	0/0:23,0:23:23.95:0,24,473	0/0:18,0:18:12.03:0,12,221	1/1:11,0:15:9.03:126,9,0	1/1:7,0:9:6.02:84,6,0	0/1:16,0:17:29.60:35,0,30	1/1:18,0:18:3.01:37,3,0	0/1:22,0:22:7.83:8,0,19	0/0:24,0:23:3.01:0,3,48	0/0:23,0:23:12.04:0,12,329	0/0:12,0:12:15.03:0,15,343	1/1:15,1:15:7.18:51,7,0	0/1:23,0:24:46.48:109,0,46	1/1:11,0:19:6.01:67,6,0	0/0:11,0:10:2.88:0,3,29
chr10	53836838	.	TA	T	412.09	PASS	AC=2;AF=0.038;AN=52;BaseQRankSum=3.206;DP=338;FS=43.253;HRun=1;HaplotypeScore=41.2980;InbreedingCoeff=0.8211;MQ=48.75;MQ0=18;MQRankSum=-4.590;QD=21.69;ReadPosRankSum=-1.655;VQSLOD=0.8806;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:9:15.05:0,15,240	0/0:5,0:4:9.03:0,9,141	./.	./.	0/0:19,0:18:30.10:0,30,478	0/0:10,0:9:27.09:0,27,431	0/0:11,0:8:21.07:0,21,334	1/1:3,16:15:39.09:506,39,0	0/0:13,0:13:36.12:0,36,566	0/0:10,0:10:27.09:0,27,430	0/0:10,0:10:24.08:0,24,382	0/0:14,0:13:27.09:0,27,430	0/0:8,0:8:24.08:0,24,382	0/0:18,0:18:45.15:0,45,712	0/0:8,0:8:20.94:0,21,300	0/0:11,0:10:30.10:0,30,477	0/0:12,0:12:33.11:0,33,527	0/0:24,0:24:57.17:0,57,877	0/0:13,0:6:18.05:0,18,260	0/0:12,0:11:20.98:0,21,278	0/0:24,0:21:41.79:0,42,638	0/0:14,0:14:36.11:0,36,549	0/0:18,0:17:48.16:0,48,762	0/0:11,0:10:21.07:0,21,335	0/0:10,0:10:23.70:0,24,382	0/0:11,0:10:27.07:0,27,406	0/0:14,0:14:39.13:0,39,619	0/0:4,0:2:6.02:0,6,96
chr10	53838940	.	CCTT	C	1324.02	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.749;DP=602;FS=0.000;HRun=0;HaplotypeScore=80.6465;InbreedingCoeff=0.9985;MQ=83.89;MQ0=0;MQRankSum=-3.722;QD=41.38;ReadPosRankSum=0.982;VQSLOD=4.6394;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:72.22:0,72,1625	0/0:11,0:11:33.11:0,33,813	0/0:21,0:21:63.18:0,63,1278	0/0:15,0:14:41.84:0,42,733	0/0:27,0:27:78.19:0,78,1770	0/0:27,0:27:81.24:0,81,1803	0/0:21,0:21:63.21:0,63,1443	0/0:38,0:38:99:0,114,2705	0/0:11,0:11:33.11:0,33,810	0/0:33,0:33:99:0,99,2353	0/0:23,0:23:69.23:0,69,1650	0/0:17,0:17:51.18:0,51,1255	0/0:25,0:25:75.23:0,75,1709	0/0:22,0:22:66.17:0,66,1543	0/0:24,0:24:69.21:0,69,1576	0/0:15,0:15:45.13:0,45,1011	1/1:0,19:19:45.15:836,45,0	1/1:3,10:13:36.11:609,36,0	0/0:24,0:24:72.24:0,72,1675	0/0:25,0:25:75.25:0,75,1777	0/0:12,0:12:36.12:0,36,881	0/0:18,0:18:54.17:0,54,1252	0/0:26,0:26:78.27:0,78,1844	0/0:23,0:23:69.21:0,69,1600	0/0:15,0:15:45.14:0,45,1061	0/0:29,0:29:87.28:0,87,1978	0/0:35,0:35:99:0,105,2377	0/0:9,0:9:24.06:0,24,540
chr10	53840403	.	G	GAGGACAGTAAT	32713.62	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-7.063;DP=709;FS=2.917;HRun=0;HaplotypeScore=208.9909;InbreedingCoeff=0.9977;MQ=67.52;MQ0=0;MQRankSum=-19.265;QD=116.83;ReadPosRankSum=-3.109;VQSLOD=4.5435;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,132,4587	0/0:15,0:15:45.15:0,45,1632	0/0:24,0:24:51.39:0,51,2066	0/0:23,0:23:63.13:0,63,1947	1/1:5,12:24:47.75:1675,48,0	1/1:3,9:12:33.03:1770,33,0	1/1:4,8:18:36.04:1252,36,0	0/0:29,0:29:87.29:0,87,2868	1/1:1,14:15:45.15:2508,45,0	1/1:9,11:26:72.08:3489,72,0	1/1:5,8:19:39.53:1247,40,0	0/0:32,0:32:96.32:0,96,3430	0/0:39,0:39:99:0,117,4140	1/1:4,23:30:81.28:4564,81,0	0/0:44,0:44:99:0,129,4479	0/0:33,0:33:99:0,99,3425	0/0:33,0:33:99:0,99,3501	0/0:31,0:31:93.28:0,93,3300	1/1:5,5:12:36.12:1619,36,0	1/1:3,10:15:39.06:1780,39,0	1/1:13,7:27:38.91:1234,39,0	0/0:29,0:29:87.27:0,87,2984	0/0:24,0:24:72.23:0,72,2302	0/0:27,0:27:81.28:0,81,2916	1/1:3,15:19:48.16:2511,48,0	1/1:9,13:25:72.23:3871,72,0	1/1:6,21:33:81.19:4429,81,0	1/1:3,2:5:15.05:765,15,0
chr10	53842232	.	G	GT	1480.28	PASS	AB=0.813;AC=6;AF=0.107;AN=56;BaseQRankSum=-7.025;DP=681;FS=3.676;HRun=10;HaplotypeScore=69.2539;InbreedingCoeff=0.6371;MQ=74.25;MQ0=0;MQRankSum=0.960;QD=15.75;ReadPosRankSum=-3.823;VQSLOD=3.1484;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:31:91.91:0,92,740	0/1:12,0:14:8.58:9,0,196	0/0:12,0:12:19.58:0,20,134	0/0:14,0:14:17.92:0,18,147	0/0:30,0:30:68.87:0,69,563	0/0:31,1:32:45.87:0,46,583	0/0:15,0:15:41.92:0,42,340	1/1:7,23:31:65.99:678,66,0	0/0:22,0:22:26.83:0,27,367	0/0:37,0:38:88.90:0,89,718	0/0:26,1:28:14:0,14,506	0/0:28,0:28:71.87:0,72,591	0/0:20,0:20:47.92:0,48,393	0/0:26,0:26:74.91:0,75,616	0/0:24,0:24:65.92:0,66,542	0/0:21,2:23:27.94:0,28,435	1/1:6,27:34:40.68:673,41,0	0/1:6,9:15:16.20:255,0,16	0/0:32,1:33:45.88:0,46,580	0/0:21,1:22:18.95:0,19,362	0/0:14,0:14:26.93:0,27,222	0/0:22,0:23:49.95:0,50,400	0/0:31,0:31:56.83:0,57,613	0/0:22,0:25:55.94:0,56,445	0/0:23,1:26:41.01:0,41,522	0/0:30,0:32:61.90:0,62,498	0/0:27,0:27:40.46:0,40,490	0/0:11,0:11:26.96:0,27,221
chr10	53843075	.	CCCAT	C	512.75	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-1.432;DP=548;FS=0.000;HRun=0;HaplotypeScore=88.0355;InbreedingCoeff=0.9954;MQ=82.15;MQ0=0;MQRankSum=-4.566;QD=26.99;ReadPosRankSum=-3.846;VQSLOD=2.3663;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:60.20:0,60,1449	0/0:8,0:8:24.08:0,24,580	0/0:22,0:22:60.19:0,60,1284	0/0:16,0:16:34.66:0,35,705	0/0:26,0:26:72.23:0,72,1808	0/0:29,0:29:81.24:0,81,1864	0/0:20,0:20:57.19:0,57,1434	1/1:14,5:19:42.09:608,42,0	0/0:28,0:28:81.26:0,81,1905	0/0:17,0:17:48.15:0,48,1065	0/0:21,0:21:60.17:0,60,1385	0/0:20,0:20:60.21:0,60,1493	0/0:13,0:13:39.13:0,39,883	0/0:23,0:23:69.23:0,69,1703	0/0:22,0:22:63.21:0,63,1501	0/0:26,0:26:78.25:0,78,1790	0/0:17,0:17:51.17:0,51,1189	0/0:12,0:12:36.12:0,36,867	0/0:16,0:16:48.16:0,48,1162	0/0:18,0:18:48.16:0,48,1114	0/0:17,0:17:48.16:0,48,1162	0/0:26,0:26:72.24:0,72,1781	0/0:23,0:23:57.18:0,57,1401	0/0:13,0:13:36.12:0,36,854	0/0:23,0:23:69.24:0,69,1715	0/0:20,0:20:60.21:0,60,1423	0/0:24,0:24:72.23:0,72,1737	0/0:8,0:8:24.08:0,24,597
chr10	53844320	.	AT	A	487.03	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.492;DP=596;FS=3.980;HRun=9;HaplotypeScore=55.5085;InbreedingCoeff=0.9498;MQ=71.66;MQ0=1;MQRankSum=1.526;QD=17.39;ReadPosRankSum=-4.023;VQSLOD=2.7345;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:66.18:0,66,752	0/0:12,0:12:33.07:0,33,368	0/0:10,0:10:13.12:0,13,216	0/0:7,0:7:12.90:0,13,120	0/0:25,0:25:72.20:0,72,822	0/0:27,0:27:72.21:0,72,831	0/0:12,0:12:30.09:0,30,346	1/1:5,23:28:65.96:582,66,0	0/0:28,0:28:72.21:0,72,831	0/0:31,0:31:56.93:0,57,884	0/0:17,0:17:45.13:0,45,518	0/0:16,0:16:45.12:0,45,511	0/0:32,0:32:87.26:0,87,1004	0/0:17,0:17:39.12:0,39,450	0/0:29,0:29:78.22:0,78,892	0/0:24,0:24:69.19:0,69,782	0/0:25,0:25:66.20:0,66,761	0/0:12,0:12:33.10:0,33,381	0/0:25,0:25:60.18:0,60,693	0/0:39,0:39:96.27:0,96,1098	0/0:14,0:13:39.12:0,39,450	0/0:21,0:22:53.98:0,54,593	0/0:18,0:18:48.14:0,48,554	0/0:17,0:17:42.12:0,42,485	0/0:20,0:20:60.18:0,60,693	0/0:28,0:28:72.20:0,72,823	0/0:28,0:28:75.21:0,75,857	0/0:9,0:9:24.07:0,24,277
chr10	53845384	.	ATT	A	463.77	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.953;DP=611;FS=0.908;HRun=10;HaplotypeScore=73.7792;InbreedingCoeff=0.9886;MQ=77.72;MQ0=0;MQRankSum=-2.316;QD=18.55;ReadPosRankSum=-3.848;VQSLOD=1.7704;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:57.16:0,57,878	0/0:9,0:10:26.58:0,27,390	0/0:15,0:15:33.11:0,33,509	0/0:19,0:20:19.45:0,19,358	0/0:30,0:30:75.24:0,75,1167	0/0:33,0:33:87.28:0,87,1358	0/0:15,0:17:36.12:0,36,552	1/1:8,17:25:51.08:559,51,0	0/0:18,0:18:48.16:0,48,762	0/0:23,0:24:68.72:0,69,1049	0/0:20,0:21:56.68:0,57,863	0/0:18,0:18:51.16:0,51,778	0/0:19,0:19:54.15:0,54,820	0/0:18,0:18:51.17:0,51,810	0/0:19,0:19:51.16:0,51,785	0/0:26,0:26:75.24:0,75,1169	0/0:22,0:21:51.17:0,51,801	0/0:25,0:24:63.21:0,63,997	0/0:26,0:26:69.21:0,69,1041	0/0:30,0:30:84.27:0,84,1308	0/0:15,0:15:36.12:0,36,571	0/0:23,0:23:69.24:0,69,1095	0/0:30,0:30:87.26:0,87,1354	0/0:8,0:8:21.07:0,21,333	0/0:18,0:18:48.16:0,48,762	0/0:28,0:28:72.21:0,72,1097	0/0:27,0:27:69.22:0,69,1048	0/0:24,0:20:51.17:0,51,809
chr10	53846187	.	AGAT	A	1361.53	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.187;DP=600;FS=0.685;HRun=0;HaplotypeScore=82.3291;InbreedingCoeff=0.9997;MQ=91.27;MQ0=0;MQRankSum=-4.162;QD=41.26;ReadPosRankSum=-3.518;VQSLOD=3.8547;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:60.21:0,60,1382	0/0:12,0:12:36.12:0,36,829	0/0:26,0:27:75.24:0,75,1634	0/0:23,0:23:63.22:0,63,1387	0/0:36,0:36:99:0,108,2441	0/0:22,0:22:60.18:0,60,1312	0/0:17,0:17:51.17:0,51,1153	1/1:3,30:33:90.27:1456,90,0	0/0:18,0:18:54.19:0,54,1237	0/0:27,0:27:78.27:0,78,1799	0/0:24,0:24:72.25:0,72,1614	0/0:22,0:22:66.23:0,66,1474	0/0:20,0:20:60.21:0,60,1359	0/0:17,0:17:48.15:0,48,1036	0/0:26,0:26:72.23:0,72,1616	0/0:18,0:18:48.15:0,48,1037	0/0:20,0:20:60.18:0,60,1262	0/0:14,0:14:36.04:0,36,830	0/0:19,0:19:57.20:0,57,1290	0/0:22,0:22:66.23:0,66,1497	0/0:17,0:17:51.16:0,51,1110	0/0:21,0:21:63.22:0,63,1453	0/0:29,0:29:84.27:0,84,1880	0/0:20,0:20:57.20:0,57,1312	0/0:18,0:18:54.19:0,54,1225	0/0:15,0:15:45.15:0,45,1035	0/0:27,0:27:81.26:0,81,1822	0/0:14,0:14:42.13:0,42,923
chr10	53846414	.	GT	G	307.89	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.138;DP=584;FS=0.000;HRun=9;HaplotypeScore=53.8200;InbreedingCoeff=0.9081;MQ=77.45;MQ0=0;MQRankSum=-1.090;QD=14.66;ReadPosRankSum=-3.353;VQSLOD=2.7248;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:75.21:0,75,856	0/0:8,0:8:21.06:0,21,242	0/0:16,0:16:36.01:0,36,382	0/0:13,0:13:6.72:0,7,255	0/0:41,0:41:99:0,120,1374	0/0:19,0:19:51.15:0,51,589	0/0:14,0:14:36.11:0,36,416	1/1:5,16:21:44.98:403,45,0	0/0:17,0:17:42.10:0,42,464	0/0:30,0:30:75.22:0,75,865	0/0:24,0:25:69.03:0,69,768	0/0:20,0:20:51.14:0,51,579	0/0:26,0:26:72.21:0,72,824	0/0:15,0:15:45.10:0,45,506	0/0:11,0:13:29.92:0,30,326	0/0:25,0:25:75.22:0,75,865	0/0:25,0:25:72.17:0,72,816	0/0:18,0:17:45.07:0,45,492	0/0:26,0:26:60.15:0,60,679	0/0:31,0:32:84.11:0,84,941	0/0:10,0:10:30.09:0,30,346	0/0:14,0:14:42.12:0,42,485	0/0:24,0:24:69.16:0,69,781	0/0:18,0:18:51.15:0,51,589	0/0:25,0:25:75.20:0,75,854	0/0:29,0:29:78.21:0,78,882	0/0:28,0:27:78.23:0,78,900	0/0:7,0:7:21.06:0,21,242
chr10	53847691	.	AAAAAAAAAT	A	2444.90	PASS	AB=0.866;AC=19;AF=0.352;AN=54;BaseQRankSum=1.725;DP=520;FS=1.827;HRun=0;HaplotypeScore=128.4221;InbreedingCoeff=0.3611;MQ=57.42;MQ0=52;MQRankSum=-4.022;QD=13.36;ReadPosRankSum=1.864;VQSLOD=2.1955;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:22:64.39:0,64,1766	0/0:7,0:7:21.06:0,21,523	0/0:51,0:15:34.09:0,34,910	0/0:39,0:11:21.54:0,22,333	1/1:7,6:11:2.85:81,3,0	0/1:17,3:14:27.43:157,0,27	1/1:9,8:14:14.74:299,15,0	0/0:22,0:18:45.08:0,45,956	0/1:13,3:12:83.84:128,0,84	1/1:6,5:9:19.17:526,19,0	0/1:7,0:4:11.64:41,0,12	0/0:18,0:18:45.14:0,45,1230	0/0:19,0:17:42.13:0,42,1118	0/1:11,1:8:19.80:54,0,20	0/0:19,0:19:42.14:0,42,1185	0/0:18,0:17:45.13:0,45,1167	0/0:41,0:39:78.22:0,78,2167	0/0:18,0:18:41.62:0,42,1178	1/1:12,1:9:17.54:231,18,0	0/1:10,4:13:4.04:225,0,4	1/1:7,1:6:0.77:41,1,0	0/0:18,0:17:43.37:0,43,1026	0/0:13,0:13:39.09:0,39,1182	0/0:21,0:19:45.63:0,46,1380	1/1:6,1:5:4.51:66,5,0	0/1:15,3:11:13.03:332,0,13	0/1:20,7:19:63.79:441,0,64	./.
chr10	53847692	.	A	AG	471.15	PASS	AB=0.855;AC=18;AF=0.333;AN=54;BaseQRankSum=4.036;DP=519;FS=3.055;HRun=0;HaplotypeScore=96.5413;InbreedingCoeff=0.3275;MQ=57.41;MQ0=53;MQRankSum=-2.461;QD=2.56;ReadPosRankSum=2.355;VQSLOD=2.7227;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:22:44.45:0,44,525	0/0:7,0:7:20.99:0,21,196	0/0:51,0:15:41.74:0,42,333	0/0:39,0:11:13.66:0,14,144	1/1:12,1:11:1.17:4,1,0	0/1:17,3:14:22.06:46,0,22	1/1:20,0:17:11.96:82,12,0	0/0:21,0:17:44.37:0,44,347	0/1:13,2:11:3.73:40,0,4	0/1:10,1:9:15.94:48,0,16	0/1:8,2:6:2.62:17,0,3	0/0:18,0:18:47.77:0,48,461	0/0:19,0:17:41.53:0,42,353	0/1:6,5:7:0.30:53,0,0	0/0:20,0:20:44.72:0,45,391	0/0:17,0:16:45.01:0,45,418	0/0:40,0:38:59.58:0,60,431	0/0:18,0:18:38.12:0,38,290	1/1:10,3:9:13.24:132,13,0	0/1:14,1:14:4.76:25,0,5	1/1:4,1:3:0.19:15,0,0	0/0:18,0:17:45.01:0,45,387	0/0:13,0:13:38.92:0,39,395	0/0:21,0:19:45.02:0,45,413	1/1:8,0:6:0.48:60,0,0	0/1:14,3:10:13.95:52,0,14	0/1:22,4:16:27.81:59,0,28	./.
chr10	53849162	.	TACACACAC	T	601.83	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=0.834;DP=593;FS=6.356;HRun=0;HaplotypeScore=166.3802;InbreedingCoeff=0.7554;MQ=54.05;MQ0=14;MQRankSum=-2.007;QD=14.68;ReadPosRankSum=-5.548;VQSLOD=-0.4876;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:44.23:0,44,1289	0/0:9,0:9:25.33:0,25,769	0/0:22,0:5:2.60:0,3,10	0/0:19,0:6:6.02:0,6,153	0/0:23,0:23:51.15:0,51,1434	0/0:23,0:22:48.14:0,48,1299	0/0:18,0:18:27.09:0,27,824	1/1:18,23:40:31.76:696,32,0	0/0:18,0:18:18.13:0,18,451	0/0:21,0:20:42.13:0,42,1165	0/0:19,0:19:33.11:0,33,928	0/0:23,0:23:52.98:0,53,1240	0/0:18,0:18:36.12:0,36,965	0/0:21,0:21:28.57:0,29,732	0/0:24,0:24:51.17:0,51,1498	0/0:22,0:22:45.09:0,45,1267	0/0:10,0:9:21.52:0,22,518	0/0:9,0:9:18.95:0,19,460	0/0:23,0:23:48.11:0,48,1353	0/0:31,0:30:52.06:0,52,1543	0/0:31,0:30:69.63:0,70,1854	0/0:20,0:19:33:0,33,988	0/0:11,0:11:24.08:0,24,628	0/0:31,0:30:62.59:0,63,1658	0/0:28,0:27:51.18:0,51,1621	0/0:21,0:20:54.05:0,54,1405	0/0:18,0:18:39.04:0,39,890	0/0:9,0:9:12.04:0,12,366
chr10	53849834	.	CGA	C	391.19	PASS	AB=0.951;AC=19;AF=0.365;AN=52;BaseQRankSum=1.949;DP=707;FS=10.550;HRun=0;HaplotypeScore=105.8351;InbreedingCoeff=0.2983;MQ=64.82;MQ0=20;MQRankSum=1.563;QD=1.52;ReadPosRankSum=0.624;VQSLOD=0.9495;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:28:7.09:29,7,0	1/1:8,0:8:2.98:23,3,0	0/0:81,0:29:0:0,0,0	./.	0/1:16,0:16:0.99:1,0,19	1/1:17,0:16:8.03:58,8,0	1/1:23,1:22:2.96:30,3,0	./.	1/1:19,0:21:8.52:42,9,0	0/0:23,0:23:16.71:0,17,124	0/0:14,0:14:0:0,0,0	0/0:24,0:22:8.86:0,9,62	0/0:20,0:20:11.93:0,12,88	0/0:27,0:27:4.71:0,5,47	0/0:29,0:30:23.98:0,24,219	1/1:26,6:33:17.55:151,18,0	0/1:15,0:18:8.99:20,0,9	0/1:16,0:17:16.31:16,0,16	0/1:14,0:14:4.23:4,0,21	0/0:19,0:19:5.99:0,6,48	0/0:23,0:23:16.09:0,16,139	0/0:11,0:11:5.99:0,6,48	0/1:12,0:12:1.91:2,0,69	0/1:25,2:28:10.22:161,0,10	0/0:23,0:23:6.19:0,6,36	0/0:28,0:27:29.54:0,30,278	0/1:19,0:19:7.42:7,0,40	0/0:5,0:5:2.98:0,3,22
chr10	53849921	.	GACAGAGAGAGAC	G	8610.10	PASS	AB=1.000;AC=28;AF=0.500;AN=56;BaseQRankSum=0.913;DP=663;FS=2.692;HRun=0;HaplotypeScore=214.3763;InbreedingCoeff=0.8412;MQ=57.82;MQ0=10;MQRankSum=1.612;QD=28.51;ReadPosRankSum=2.654;VQSLOD=4.3521;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:78.25:0,78,1574	0/0:16,0:16:32.70:0,33,678	0/0:17,0:7:6.02:0,6,99	0/1:39,0:18:7.45:7,0,73	1/1:14,0:14:18.06:260,18,0	1/1:14,0:14:32.99:639,33,0	1/1:15,0:14:15.05:246,15,0	0/0:40,0:36:60.16:0,60,836	1/1:17,0:14:30.10:671,30,0	1/1:24,0:22:45.14:981,45,0	1/1:20,0:19:29.90:547,30,0	0/0:33,0:33:75.70:0,76,1899	0/0:24,0:24:63.21:0,63,1363	0/1:18,0:18:16.86:741,0,17	0/0:29,0:29:69.24:0,69,1757	0/0:36,0:36:87.28:0,87,1893	0/0:22,0:22:45.08:0,45,814	0/0:21,0:22:52.66:0,53,1077	1/1:14,0:9:15.05:279,15,0	1/1:16,0:16:24.06:403,24,0	1/1:29,0:24:54.18:1125,54,0	0/0:28,0:28:57.19:0,57,1268	0/0:17,0:17:33.10:0,33,738	0/0:37,0:36:46.83:0,47,1751	1/1:20,0:18:36.08:635,36,0	1/1:8,28:35:81.01:1253,81,0	1/1:20,0:20:36.12:692,36,0	1/1:6,0:5:9.03:131,9,0
chr10	53850052	.	G	GGATAGATAGATA	4360.46	PASS	AB=0.745;AC=25;AF=0.446;AN=56;BaseQRankSum=4.512;DP=744;FS=2.357;HRun=0;HaplotypeScore=231.5433;InbreedingCoeff=0.6526;MQ=65.82;MQ0=6;MQRankSum=-6.581;QD=12.18;ReadPosRankSum=-2.920;VQSLOD=3.1474;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:48.09:0,48,1283	0/0:6,0:6:18.05:0,18,488	0/0:42,0:21:2.98:0,3,21	0/0:61,0:39:5.62:0,6,43	1/1:16,0:38:18.06:450,18,0	1/1:6,10:19:9.03:523,9,0	1/1:12,0:18:3.01:73,3,0	0/0:44,0:44:30:0,30,266	1/1:6,0:21:21.07:535,21,0	1/1:15,0:32:6.93:207,7,0	0/1:11,0:21:15.94:31,0,16	0/0:25,0:24:45.09:0,45,1048	0/0:23,0:23:50.48:0,50,1658	1/1:11,0:34:21.86:606,22,0	0/0:37,0:37:54.52:0,55,1836	0/1:29,0:30:7.16:7,0,1868	0/0:14,0:14:20.94:0,21,713	0/0:14,0:14:30.09:0,30,893	1/1:6,0:13:21.01:362,21,0	1/1:3,0:18:12.04:301,12,0	1/1:9,0:20:3.48:73,3,0	0/0:24,0:24:44.95:0,45,1232	0/0:15,0:15:21.06:0,21,578	0/0:26,0:25:54.11:0,54,1524	1/1:12,0:38:36.12:901,36,0	0/1:8,0:25:99:215,0,101	1/1:11,0:27:3.01:77,3,0	0/0:10,0:26:16.35:0,16,43
chr10	53850437	.	GA	G	7503.80	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=3.501;DP=642;FS=9.328;HRun=9;HaplotypeScore=71.5075;InbreedingCoeff=0.9984;MQ=74.20;MQ0=0;MQRankSum=-2.706;QD=22.07;ReadPosRankSum=2.283;VQSLOD=5.5343;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,1:20:23.64:0,24,511	0/0:13,0:13:39.12:0,39,449	0/0:14,0:14:30.94:0,31,316	0/0:12,0:12:21.06:0,21,237	1/1:3,26:29:59.93:539,60,0	1/1:2,36:38:99:961,105,0	1/1:3,14:17:39.02:357,39,0	0/0:5,0:45:99:0,105,544	1/1:3,19:23:53.06:473,53,0	1/1:3,24:27:72.04:659,72,0	1/1:5,15:20:42.01:384,42,0	0/0:22,0:22:63.19:0,63,727	0/0:26,0:26:66.20:0,66,762	1/1:1,20:21:48.03:439,48,0	0/0:15,1:16:20.68:0,21,492	0/0:17,0:17:45.12:0,45,510	0/0:6,0:33:73.93:0,74,393	0/0:1,0:17:36.93:0,37,188	1/1:0,12:12:36.01:325,36,0	1/1:3,18:21:48.02:439,48,0	1/1:3,20:23:51.02:467,51,0	0/0:26,0:26:72.19:0,72,810	0/0:26,0:26:66.20:0,66,762	0/0:15,0:15:39.12:0,39,450	1/1:0,27:27:66.03:604,66,0	1/1:6,28:34:84.01:759,84,0	1/1:3,30:33:78.03:714,78,0	1/1:0,15:15:42.02:384,42,0
chr10	53853233	.	AT	A	10520.12	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=12.917;DP=722;FS=4.509;HRun=9;HaplotypeScore=74.6298;InbreedingCoeff=0.9882;MQ=77.67;MQ0=1;MQRankSum=-2.852;QD=22.43;ReadPosRankSum=0.989;VQSLOD=5.8115;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,123,1399	0/0:5,0:5:15.03:0,15,163	0/0:13,0:13:29.85:0,30,290	0/0:20,0:19:8.45:0,8,234	1/1:2,29:31:72.01:659,72,0	1/1:1,26:27:78.04:714,78,0	1/1:7,16:23:57.87:505,58,0	1/1:5,25:30:75.02:681,75,0	1/1:0,16:16:48.03:439,48,0	1/1:2,27:29:49.32:707,49,0	1/1:6,26:32:66.02:604,66,0	0/0:24,0:24:66.18:0,66,752	0/0:28,0:28:75.19:0,75,844	1/1:6,34:40:93.04:851,93,0	0/0:26,0:26:69.19:0,69,786	0/0:23,1:24:35.71:0,36,657	1/1:1,30:33:81.85:726,82,0	1/1:2,16:18:48.02:439,48,0	1/1:3,18:21:54:488,54,0	1/1:1,23:24:63.02:577,63,0	1/1:2,23:27:70.11:616,70,0	0/0:18,0:18:51.15:0,51,588	0/0:22,0:22:63.18:0,63,717	0/0:28,0:28:84.25:0,84,970	1/1:3,22:25:60.03:549,60,0	1/1:6,30:36:90:812,90,0	1/1:5,31:36:90.04:824,90,0	1/1:5,16:21:36:329,36,0
chr10	53854256	.	T	TAC	1279.25	PASS	AB=0.908;AC=26;AF=0.500;AN=52;BaseQRankSum=3.509;DP=645;FS=4.817;HRun=0;HaplotypeScore=135.9294;InbreedingCoeff=0.5873;MQ=64.30;MQ0=4;MQRankSum=-4.754;QD=4.28;ReadPosRankSum=-2.189;VQSLOD=2.4852;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,1:37:37.63:0,38,480	0/0:9,0:9:18.05:0,18,201	./.	./.	0/0:13,0:8:0.25:0,0,1	1/1:23,0:22:2.21:11,2,0	1/1:27,0:25:6.49:48,6,0	0/1:33,0:33:21.61:137,0,22	1/1:24,2:25:9.18:95,9,0	1/1:14,0:12:13.53:94,14,0	0/1:10,0:10:0:0,0,0	0/0:28,0:28:32.22:0,32,310	0/0:25,0:28:15.79:0,16,329	1/1:36,0:34:2.69:24,3,0	0/0:20,0:21:38.86:0,39,399	0/0:27,0:28:40.59:0,41,401	0/1:15,19:35:62.85:440,0,63	1/1:6,12:20:9.93:305,10,0	1/1:14,0:13:11.37:69,11,0	0/1:8,0:8:0:0,0,0	0/0:38,0:36:0.09:0,0,1	0/0:27,0:25:30.06:0,30,323	0/0:13,0:11:15.04:0,15,166	0/0:49,0:48:91.52:0,92,934	1/1:14,0:12:2.97:20,3,0	1/1:25,0:24:20.41:135,20,0	1/1:7,0:7:7.82:54,8,0	1/1:6,0:5:4.66:19,5,0
chr10	53854287	.	A	ATG	3921.16	PASS	AB=0.848;AC=17;AF=0.304;AN=56;BaseQRankSum=9.677;DP=807;FS=33.267;HRun=0;HaplotypeScore=162.2894;InbreedingCoeff=0.2276;MQ=51.52;MQ0=18;MQRankSum=0.464;QD=12.81;ReadPosRankSum=-0.661;VQSLOD=1.8356;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:43:92.32:0,92,1559	0/0:16,0:16:36.59:0,37,544	0/0:46,0:12:11.57:0,12,329	0/0:55,0:21:30.25:0,30,533	0/1:10,1:6:36.88:37,0,61	0/1:18,5:21:99:234,0,103	0/1:26,4:28:66.48:509,0,66	0/0:39,0:37:99:0,105,1459	0/1:23,5:27:45.93:199,0,46	0/1:18,3:17:99:366,0,117	0/1:1,4:6:0:0,0,0	0/0:36,0:36:96.17:0,96,1402	0/0:34,0:34:93.21:0,93,1315	1/1:33,9:39:11.72:494,12,0	0/0:31,0:31:86.89:0,87,1239	0/0:36,0:35:87.44:0,87,1327	0/0:43,0:42:61.56:0,62,814	0/0:25,0:25:35.85:0,36,429	1/1:8,10:18:2.71:584,3,0	1/1:7,2:9:12.04:178,12,0	0/1:60,2:58:76.60:550,0,77	0/0:27,0:26:54.15:0,54,793	0/0:15,0:14:27.07:0,27,403	0/0:47,0:47:99:0,129,2049	1/1:16,4:18:14.40:248,14,0	0/1:23,2:24:99:345,0,338	0/1:9,2:11:86.94:179,0,87	0/0:5,0:4:7.57:0,8,73
chr10	53854382	.	CAGAT	C	11883.65	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=16.738;DP=821;FS=1.692;HRun=0;HaplotypeScore=165.0862;InbreedingCoeff=0.9811;MQ=65.80;MQ0=3;MQRankSum=-9.598;QD=35.37;ReadPosRankSum=4.052;VQSLOD=4.7571;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,123,3235	0/0:15,0:15:39.12:0,39,959	0/0:31,0:25:64.83:0,65,1489	0/0:39,0:31:66.86:0,67,1757	1/1:0,18:18:26.93:492,27,0	1/1:3,16:15:36.12:683,36,0	1/1:1,22:19:24.05:365,24,0	0/0:44,0:44:99:0,114,2782	1/1:2,33:33:72.25:1349,72,0	1/1:2,32:33:93.30:1700,93,0	1/1:1,11:12:27.02:439,27,0	0/0:46,0:46:99:0,132,3309	0/0:45,0:45:99:0,123,3030	1/1:3,30:27:51.17:947,51,0	0/0:34,0:33:96.33:0,96,2434	0/0:44,0:44:99:0,123,3230	0/0:35,0:35:99:0,102,2713	0/0:30,0:30:87.30:0,87,2208	1/1:1,10:8:21.07:365,21,0	1/1:0,21:21:45.15:834,45,0	1/1:4,34:38:69.19:1254,69,0	0/0:21,0:21:57.18:0,57,1401	0/0:24,0:24:66.23:0,66,1683	0/0:31,0:31:75.26:0,75,1981	1/1:2,32:34:57.20:1081,57,0	1/1:2,31:31:6.31:1484,6,0	1/1:0,20:14:35.99:682,36,0	1/1:1,4:4:12.04:208,12,0
chr10	53854805	.	TAC	T	230.76	PASS	AB=0.900;AC=10;AF=0.185;AN=54;BaseQRankSum=4.388;DP=640;FS=16.045;HRun=0;HaplotypeScore=88.5900;InbreedingCoeff=0.2939;MQ=71.69;MQ0=0;MQRankSum=-0.654;QD=1.79;ReadPosRankSum=-4.159;VQSLOD=-0.5834;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:93.30:0,93,1745	0/0:13,0:13:39.13:0,39,739	0/0:28,0:27:75.73:0,76,1404	0/0:24,0:22:60.20:0,60,1102	1/1:26,5:31:5.29:42,5,0	0/0:13,0:13:3:0,3,25	1/1:12,0:12:0.89:2,1,0	0/0:40,0:40:99:0,117,2151	0/0:11,0:11:3:0,3,25	0/0:32,1:30:11.64:0,12,380	./.	0/0:24,0:24:66.23:0,66,1254	0/0:25,0:25:66.21:0,66,1240	0/0:15,0:14:2.22:0,2,42	0/0:31,0:31:93.30:0,93,1746	0/0:20,0:20:60.19:0,60,1125	0/0:23,0:23:69.24:0,69,1332	0/0:20,0:20:57.20:0,57,1083	0/1:2,4:6:60.68:115,0,61	0/1:36,0:34:16.01:16,0,32	0/1:9,0:9:23.16:23,0,88	0/0:27,0:27:75.26:0,75,1439	0/0:22,0:22:66.23:0,66,1240	0/0:29,0:29:72.25:0,72,1390	0/1:27,0:25:12.67:38,0,13	0/0:26,0:25:48.15:0,48,607	0/0:31,0:29:12.04:0,12,150	1/1:8,0:5:9.03:128,9,0
chr10	53854964	.	GA	G	7280.21	PASS	AB=0.929;AC=29;AF=0.518;AN=56;BaseQRankSum=12.132;DP=599;FS=0.672;HRun=9;HaplotypeScore=62.3388;InbreedingCoeff=0.9620;MQ=67.68;MQ0=1;MQRankSum=-6.329;QD=22.13;ReadPosRankSum=3.396;VQSLOD=5.6539;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:66.20:0,66,762	0/1:12,1:13:0.39:0,0,250	0/0:20,0:17:32.90:0,33,348	0/0:13,0:13:29.94:0,30,290	1/1:1,30:31:84.04:768,84,0	1/1:3,22:25:66.03:604,66,0	1/1:2,20:22:57.03:522,57,0	0/0:25,0:25:63.17:0,63,710	1/1:0,15:15:42.02:384,42,0	1/1:3,24:27:69.03:631,69,0	1/1:2,26:28:69.03:629,69,0	0/0:12,0:12:27.08:0,27,312	0/0:26,0:26:62.07:0,62,714	1/1:4,20:24:25.41:487,25,0	0/0:21,0:21:57.17:0,57,657	0/0:18,0:18:54.14:0,54,604	0/0:41,0:41:99:0,105,1196	0/0:14,0:14:33.10:0,33,381	1/1:1,14:15:41.98:373,42,0	1/1:4,19:23:51.02:466,51,0	1/1:2,17:19:45.02:412,45,0	0/0:18,0:18:48.14:0,48,554	0/0:20,0:20:54.16:0,54,622	0/0:17,0:16:48.14:0,48,554	1/1:2,17:19:48.03:439,48,0	1/1:5,30:35:87.04:796,87,0	1/1:1,22:23:57.03:521,57,0	1/1:1,9:10:27.01:247,27,0
chr10	53855242	.	CCCTT	C	2098.25	PASS	AB=0.918;AC=18;AF=0.375;AN=48;BaseQRankSum=2.121;DP=695;FS=17.645;HRun=0;HaplotypeScore=141.8937;InbreedingCoeff=0.5731;MQ=69.79;MQ0=5;MQRankSum=-2.010;QD=7.26;ReadPosRankSum=0.524;VQSLOD=1.9463;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:42:10.13:0,10,561	./.	./.	./.	1/1:27,0:27:18.05:254,18,0	1/1:27,0:27:39.13:572,39,0	1/1:29,0:29:14.97:164,15,0	./.	0/0:20,0:20:12.01:0,12,165	0/1:21,0:21:63.62:64,0,177	0/0:18,0:18:14.98:0,15,210	0/0:29,0:29:33.03:0,33,599	0/0:22,0:22:24.07:0,24,509	1/1:22,0:22:15.04:208,15,0	0/0:30,0:30:27.08:0,27,530	0/0:18,0:18:9.02:0,9,166	1/1:24,9:33:20.71:317,21,0	1/1:18,5:23:21.05:278,21,0	0/0:30,0:28:12.04:0,12,188	0/0:28,0:28:15.04:0,15,243	0/1:34,0:34:48.77:49,0,264	0/0:15,0:15:6.02:0,6,139	0/0:17,0:17:6.02:0,6,139	0/1:16,15:31:32.77:250,0,33	1/1:17,0:17:9.02:118,9,0	0/0:34,0:34:24.08:0,24,378	0/1:25,0:25:5.92:6,0,223	0/0:8,0:8:12.04:0,12,231
chr10	53855290	.	T	TCCTA	3653.65	PASS	AB=1.000;AC=18;AF=0.321;AN=56;BaseQRankSum=6.997;DP=589;FS=3.492;HRun=0;HaplotypeScore=131.8821;InbreedingCoeff=0.1708;MQ=58.11;MQ0=12;MQRankSum=2.505;QD=12.60;ReadPosRankSum=0.669;VQSLOD=3.4371;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:98.92:0,99,1039	0/0:7,0:6:17.94:0,18,146	0/0:18,0:12:13.03:0,13,163	0/0:16,0:5:14.97:0,15,151	0/1:26,0:26:56.67:285,0,57	0/1:24,0:25:99:157,0,99	0/1:21,0:21:99:249,0,114	0/0:23,0:19:50.41:0,50,423	0/1:20,0:19:82.04:239,0,82	0/1:31,0:31:76.25:418,0,76	1/1:4,12:17:25.01:294,25,0	0/0:27,0:27:75.85:0,76,858	0/0:18,0:18:47.99:0,48,617	0/1:15,0:15:74.07:76,0,74	0/0:25,0:25:75.08:0,75,896	0/0:14,0:14:42.02:0,42,451	0/0:25,0:25:62.76:0,63,565	0/0:24,0:24:65.97:0,66,653	0/1:17,0:14:33.64:159,0,34	1/1:4,14:20:35.67:410,36,0	0/1:27,0:27:99:335,0,115	0/0:15,0:15:42:0,42,416	0/0:19,0:19:53.99:0,54,527	0/0:30,0:30:55.60:0,56,531	0/1:16,0:16:46.43:198,0,46	1/1:21,0:21:47.39:465,47,0	0/1:27,0:27:99:281,0,159	1/1:6,0:6:13.27:89,13,0
chr10	53855297	.	TTC	T	74.62	PASS	AB=0.763;AC=3;AF=0.054;AN=56;BaseQRankSum=10.410;DP=598;FS=15.129;HRun=0;HaplotypeScore=125.7905;InbreedingCoeff=-0.0629;MQ=64.36;MQ0=5;MQRankSum=-4.347;QD=1.11;ReadPosRankSum=1.256;VQSLOD=1.8083;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:97.57:0,98,1574	0/0:7,0:7:21.07:0,21,307	0/0:21,0:15:40.78:0,41,492	0/0:21,0:10:24.01:0,24,319	0/1:20,6:26:6.77:7,0,381	0/1:13,12:25:99:134,0,191	0/0:17,2:19:4.95:0,5,272	0/0:26,0:25:70.44:0,70,982	0/0:20,0:19:56.51:0,57,476	0/0:31,0:31:91.79:0,92,703	0/0:18,0:18:49.02:0,49,693	0/0:24,0:24:72.24:0,72,1238	0/0:18,0:18:54.18:0,54,923	0/1:12,4:16:28.02:28,0,197	0/0:29,0:29:87.29:0,87,1420	0/0:15,0:15:45.15:0,45,726	0/0:26,0:26:43.12:0,43,691	0/0:21,0:21:42.36:0,42,604	0/0:13,0:13:38.82:0,39,342	0/0:21,0:20:57.12:0,57,712	0/0:27,0:27:80.68:0,81,684	0/0:16,0:16:48.16:0,48,761	0/0:19,0:19:57.18:0,57,864	0/0:32,0:32:45.11:0,45,694	0/0:15,2:17:5.27:0,5,251	0/0:21,0:21:62.50:0,62,539	0/0:27,0:27:78.59:0,79,676	0/0:8,0:8:23.99:0,24,255
chr10	53857260	.	TA	T	7939.90	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=12.911;DP=702;FS=3.738;HRun=9;HaplotypeScore=71.9869;InbreedingCoeff=0.9985;MQ=76.55;MQ0=0;MQRankSum=-1.767;QD=23.77;ReadPosRankSum=2.821;VQSLOD=5.8648;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,1:51:99:0,114,1563	0/0:14,0:14:42.12:0,42,485	0/0:26,0:23:46.78:0,47,573	0/0:15,0:14:36.10:0,36,407	1/1:0,36:36:99:933,102,0	1/1:3,16:19:48.02:439,48,0	1/1:4,22:26:60.03:549,60,0	0/0:34,0:34:93.26:0,93,1057	1/1:1,23:24:66.04:604,66,0	1/1:4,19:22:57:512,57,0	1/1:2,16:18:45.02:412,45,0	0/0:18,0:18:54.16:0,54,623	0/0:28,0:28:81.24:0,81,928	1/1:3,27:30:78.04:714,78,0	0/0:33,0:33:90.23:0,90,1016	0/0:26,2:28:23.30:0,23,775	0/0:34,0:34:93.28:0,93,1073	0/0:14,0:14:36.11:0,36,415	1/1:3,20:23:60.01:544,60,0	1/1:3,17:20:19.31:432,19,0	1/1:3,38:41:99:988,108,0	0/0:22,0:22:60.18:0,60,692	0/0:21,0:21:54.16:0,54,623	0/0:29,0:29:84.25:0,84,969	1/1:1,17:18:45.02:412,45,0	1/1:1,23:24:69.04:631,69,0	1/1:2,22:24:60.03:549,60,0	1/1:0,8:8:24.01:220,24,0
chr10	53858330	.	A	ATC	10502.34	PASS	AB=0.938;AC=29;AF=0.518;AN=56;BaseQRankSum=-4.229;DP=710;FS=13.880;HRun=0;HaplotypeScore=172.2830;InbreedingCoeff=0.9330;MQ=66.97;MQ0=3;MQRankSum=-6.002;QD=33.13;ReadPosRankSum=3.720;VQSLOD=6.0297;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:63.65:0,64,829	0/1:14,1:15:8.08:8,0,531	0/0:32,0:30:55.02:0,55,916	0/0:46,0:41:68.85:0,69,874	1/1:4,16:19:36.07:597,36,0	1/1:5,11:16:24.08:424,24,0	1/1:7,16:23:39.13:671,39,0	0/0:51,0:51:99:0,147,1931	1/1:5,12:17:29.94:442,30,0	1/1:9,20:28:32.62:1108,33,0	1/1:2,10:12:15.02:265,15,0	0/0:38,1:39:34.48:0,34,1089	0/0:30,0:30:63.09:0,63,852	1/1:5,15:20:27.03:416,27,0	0/0:29,0:29:48.15:0,48,659	0/0:28,0:27:54.04:0,54,728	0/0:25,0:25:63.18:0,63,836	0/0:13,0:13:33.10:0,33,437	1/1:3,13:15:39.02:620,39,0	1/1:1,20:22:54.14:918,54,0	1/1:5,50:56:99:1925,111,0	0/0:20,0:20:54.17:0,54,724	0/0:19,0:19:48.16:0,48,658	0/0:29,0:29:72.61:0,73,967	1/1:4,27:31:75.18:1301,75,0	1/1:6,16:22:66.22:1128,66,0	1/1:4,9:13:25.33:413,25,0	1/1:0,5:5:15.05:266,15,0
chr10	53858408	.	G	GTC	9346.10	PASS	AB=0.822;AC=28;AF=0.500;AN=56;BaseQRankSum=-3.291;DP=878;FS=24.216;HRun=0;HaplotypeScore=217.9753;InbreedingCoeff=0.7948;MQ=56.92;MQ0=7;MQRankSum=-1.820;QD=23.42;ReadPosRankSum=2.622;VQSLOD=3.6967;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:92.99:0,93,1192	0/1:15,1:16:10.17:10,0,535	0/0:37,0:20:14.38:0,14,318	0/0:54,0:33:62.77:0,63,829	1/1:4,28:31:18.13:591,18,0	1/1:5,26:31:7.84:116,8,0	1/1:15,17:32:47.51:794,48,0	0/0:53,0:50:99:0,147,1958	1/1:7,26:34:29.13:516,29,0	1/1:17,17:33:9.61:1155,10,0	1/1:6,15:19:26.88:490,27,0	0/0:36,0:36:66.16:0,66,907	0/0:21,0:20:28.61:0,29,358	1/1:12,13:24:11.39:175,11,0	0/0:50,0:50:90.26:0,90,1297	0/0:39,0:39:78.25:0,78,1138	0/0:33,0:33:83.78:0,84,1194	0/0:28,0:28:72.22:0,72,1049	1/1:11,2:12:9.48:303,9,0	1/1:13,9:21:29.38:694,29,0	1/1:23,34:57:99:1987,111,0	0/0:30,0:30:66.08:0,66,908	0/0:20,0:20:48.12:0,48,659	0/0:42,0:42:99:0,117,1638	1/1:9,17:26:63.17:1069,63,0	0/1:15,11:25:32.50:675,0,32	1/1:3,15:19:13.58:502,14,0	1/1:3,5:8:0.86:269,1,0
chr10	53858476	.	GTC	G	2038.80	PASS	AB=0.938;AC=23;AF=0.411;AN=56;BaseQRankSum=12.317;DP=724;FS=1.442;HRun=0;HaplotypeScore=176.8335;InbreedingCoeff=0.6936;MQ=47.71;MQ0=24;MQRankSum=-6.118;QD=6.49;ReadPosRankSum=-0.377;VQSLOD=3.4842;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:40:87.27:0,87,1488	0/0:9,0:8:17.98:0,18,283	0/0:16,0:8:15.02:0,15,215	0/0:27,0:12:16.65:0,17,313	1/1:12,5:17:5.74:30,6,0	1/1:18,10:26:4.96:56,5,0	0/1:19,4:20:4.01:30,0,4	0/0:45,0:41:99:0,99,1648	1/1:21,6:28:15.62:188,16,0	1/1:25,9:31:44.34:595,44,0	1/1:10,2:12:11.59:74,12,0	0/0:42,0:41:99:0,102,1718	0/0:25,0:25:56.20:0,56,922	1/1:21,7:25:6.49:52,6,0	0/0:46,0:45:78.23:0,78,1281	0/0:28,0:28:45.11:0,45,693	0/0:21,0:20:24.87:0,25,230	0/1:19,0:19:8.66:9,0,213	0/1:24,1:20:29.42:170,0,29	1/1:16,0:16:7.42:198,7,0	1/1:33,1:34:29.42:248,29,0	0/0:21,0:18:36.07:0,36,587	0/0:23,0:23:36.12:0,36,597	0/0:48,0:47:99:0,105,1664	0/0:6,5:11:3.27:0,3,8	1/1:22,8:30:46.25:420,46,0	1/1:12,8:19:13.39:170,13,0	0/0:6,0:5:1.89:0,2,3
chr10	53858484	.	GTC	G	577.60	PASS	AB=0.970;AC=12;AF=0.214;AN=56;BaseQRankSum=10.908;DP=661;FS=1.910;HRun=0;HaplotypeScore=167.8405;InbreedingCoeff=-0.1785;MQ=45.23;MQ0=21;MQRankSum=-9.530;QD=2.27;ReadPosRankSum=-1.519;VQSLOD=2.6461;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:43:81.25:0,81,1360	0/0:10,0:9:18.03:0,18,287	0/0:9,0:4:9.03:0,9,139	0/0:17,0:6:4.66:0,5,133	0/0:13,0:13:6:0,6,56	0/1:24,0:23:20.14:22,0,20	1/1:22,0:19:1.48:6,1,0	0/0:46,0:42:99:0,105,1726	0/1:25,1:26:44.97:126,0,45	0/1:29,5:29:99:259,0,171	0/0:10,0:10:9.02:0,9,90	0/0:42,0:41:96.80:0,97,1660	0/0:25,0:25:54.10:0,54,883	0/1:26,0:25:23.57:24,0,24	0/0:40,0:39:63.19:0,63,1053	0/0:28,0:28:45.13:0,45,742	0/0:18,0:17:0.04:0,0,126	0/1:18,0:18:21.09:21,0,169	0/1:14,1:13:17.03:17,0,179	0/1:13,0:13:9.64:10,0,94	0/1:28,1:29:5.20:5,0,119	0/0:22,0:19:27.09:0,27,462	0/0:23,0:23:27.07:0,27,416	0/0:43,0:42:92.45:0,92,1478	0/0:9,0:9:6.49:0,6,74	0/1:26,1:27:99:144,0,211	0/1:20,0:19:74.09:83,0,74	0/0:6,0:5:12.04:0,12,142
chr10	53858492	.	GTC	G	1119.37	PASS	AB=0.814;AC=12;AF=0.222;AN=54;BaseQRankSum=9.685;DP=641;FS=0.000;HRun=0;HaplotypeScore=163.6620;InbreedingCoeff=-0.1704;MQ=44.06;MQ0=25;MQRankSum=-7.149;QD=4.78;ReadPosRankSum=0.139;VQSLOD=2.3940;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:43:66.23:0,66,1159	0/0:11,0:9:18.06:0,18,287	./.	0/0:10,0:3:3.01:0,3,36	0/0:7,5:12:6.02:0,6,82	0/1:15,10:24:35.87:36,0,36	1/1:15,4:16:3.36:52,3,0	0/0:47,0:43:84.17:0,84,1248	0/1:16,10:26:63.32:210,0,63	0/1:27,5:27:99:206,0,326	0/0:7,2:9:9.03:0,9,129	0/0:41,0:40:97.49:0,97,1640	0/0:26,0:26:55.48:0,55,852	0/1:17,6:22:27.07:41,0,27	0/0:38,1:38:35.23:0,35,878	0/0:31,0:31:39.60:0,40,789	0/1:15,2:16:33.38:136,0,33	0/1:13,4:17:89.84:150,0,90	0/1:17,0:15:42.11:42,0,205	0/1:7,1:8:5.52:6,0,129	0/0:26,0:26:1.16:0,1,158	0/0:22,0:19:27.09:0,27,457	0/0:22,0:22:24.06:0,24,349	0/0:45,0:44:61.74:0,62,1452	0/0:4,5:9:6.49:0,6,106	0/1:22,8:27:99:240,0,334	0/1:10,10:19:99:144,0,124	0/0:7,0:5:11.83:0,12,128
chr10	53858506	.	G	GTC	943.60	PASS	AB=0.845;AC=28;AF=0.583;AN=48;BaseQRankSum=2.207;DP=620;FS=2.461;HRun=0;HaplotypeScore=188.5160;InbreedingCoeff=0.1656;MQ=44.24;MQ0=21;MQRankSum=-2.360;QD=2.04;ReadPosRankSum=0.363;VQSLOD=2.8138;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:31,21:49:0:0,0,0	0/1:7,5:10:15.32:80,0,15	./.	./.	./.	1/1:20,0:19:5.49:17,5,0	1/1:21,0:18:3.75:26,4,0	0/0:29,0:37:8.91:0,9,68	1/1:27,0:27:5.38:20,5,0	1/1:33,0:28:1.36:35,1,0	0/1:9,0:9:0:0,0,0	0/0:42,1:42:18.93:0,19,455	0/0:22,0:25:19.80:0,20,114	1/1:24,0:23:1.72:5,2,0	0/1:24,17:39:3.16:354,0,3	0/1:20,14:35:77.35:131,0,77	0/1:20,0:19:1.79:2,0,86	0/1:15,0:15:9.99:10,0,29	1/1:15,0:15:4.82:17,5,0	1/1:8,0:8:0.47:1,0,0	0/1:21,0:21:0:0,0,0	0/0:22,0:20:21.06:0,21,229	0/1:10,7:18:8.13:39,0,8	0/1:40,5:44:99:297,0,193	0/0:9,0:9:0.43:0,0,1	1/1:28,0:25:5.28:19,5,0	1/1:19,0:18:7.43:24,7,0	./.
chr10	53858528	.	CT	C	337.84	PASS	AB=0.947;AC=11;AF=0.212;AN=52;BaseQRankSum=8.652;DP=565;FS=2.403;HRun=1;HaplotypeScore=142.3597;InbreedingCoeff=0.2197;MQ=49.39;MQ0=24;MQRankSum=-8.229;QD=2.58;ReadPosRankSum=0.726;VQSLOD=-0.2624;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:43:48.11:0,48,601	0/0:12,0:11:18.04:0,18,201	0/0:30,1:11:32.73:0,33,359	0/0:30,0:13:27.52:0,28,314	./.	0/1:16,2:15:1.84:2,0,16	1/1:14,2:13:5.15:24,5,0	0/0:27,0:27:75.21:0,75,948	0/1:21,1:22:37.11:75,0,37	0/1:18,0:15:99:101,0,141	./.	0/0:34,0:33:81.61:0,82,1110	0/0:21,0:21:43.42:0,43,459	1/1:11,0:10:2.68:20,3,0	0/0:46,0:44:90.23:0,90,1073	0/0:36,0:36:69.03:0,69,844	0/0:19,0:18:33.02:0,33,426	0/0:13,0:13:29.64:0,30,343	0/1:4,0:4:1.08:67,0,1	0/0:3,0:3:2.18:0,2,27	0/1:13,0:11:0.01:0,0,0	0/0:25,0:24:45.11:0,45,622	0/0:23,0:23:26.07:0,26,282	0/0:38,0:37:84.19:0,84,1108	0/0:5,2:7:2.38:0,2,37	0/1:12,1:12:87.51:88,0,138	0/1:13,3:16:68.46:93,0,68	0/0:7,0:5:12.04:0,12,152
chr10	53858594	.	AT	A	7098.74	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=13.652;DP=584;FS=4.403;HRun=2;HaplotypeScore=88.9426;InbreedingCoeff=0.9961;MQ=82.17;MQ0=0;MQRankSum=-8.375;QD=32.12;ReadPosRankSum=2.376;VQSLOD=4.7527;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,111,1640	0/0:12,0:12:30.10:0,30,449	0/0:19,0:19:57.19:0,57,845	0/0:26,0:26:75.19:0,75,1060	1/1:0,22:22:52.77:698,53,0	1/1:1,20:21:54.18:700,54,0	1/1:2,19:21:48.16:622,48,0	0/0:33,0:33:99:0,99,1428	1/1:0,13:13:32.92:428,33,0	1/1:1,25:24:69.19:877,69,0	1/1:0,18:18:37.19:503,37,0	0/0:26,0:26:78.26:0,78,1169	0/0:20,0:20:57.18:0,57,833	1/1:1,12:13:33.11:428,33,0	0/0:40,0:40:99:0,117,1754	0/0:24,1:25:36.29:0,36,1022	0/0:27,0:27:81.27:0,81,1214	0/0:15,0:15:45.15:0,45,674	1/1:1,14:15:39.13:506,39,0	1/1:0,11:11:27.09:350,27,0	1/1:0,11:11:27.09:350,27,0	0/0:29,0:29:81.26:0,81,1192	0/0:22,0:22:54.17:0,54,791	0/0:28,0:28:81.27:0,81,1210	1/1:0,6:6:15.05:195,15,0	1/1:0,26:26:66.21:857,66,0	1/1:0,12:12:27.09:350,27,0	1/1:0,6:6:18.06:233,18,0
chr10	53858934	.	G	GA	10320.29	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=5.731;DP=748;FS=7.618;HRun=8;HaplotypeScore=120.7488;InbreedingCoeff=0.9988;MQ=79.57;MQ0=0;MQRankSum=-4.645;QD=28.04;ReadPosRankSum=0.203;VQSLOD=3.3998;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:38,1:39:70.42:0,70,898	0/0:11,0:11:33.02:0,33,302	0/0:26,0:26:31.85:0,32,344	0/0:24,0:21:41.54:0,42,348	1/1:1,33:34:93.23:1053,93,0	1/1:7,18:25:51.15:588,51,0	1/1:4,25:30:49.81:836,50,0	0/0:35,0:35:81.02:0,81,737	1/1:4,18:22:23.69:526,24,0	1/1:8,27:35:59.08:907,59,0	1/1:0,24:24:72.18:812,72,0	0/0:28,0:28:75.03:0,75,686	0/0:25,0:25:60.02:0,60,549	1/1:2,36:38:99:1142,99,0	0/0:42,0:42:99:0,111,1001	0/0:41,0:41:99:0,117,1070	0/0:29,0:29:75.03:0,75,686	0/0:13,0:13:36.01:0,36,329	1/1:2,15:16:42.09:462,42,0	1/1:0,19:19:51.15:584,51,0	1/1:0,23:23:54.12:607,54,0	0/0:29,0:29:78.03:0,78,713	0/0:13,0:13:36.02:0,36,329	0/0:25,0:25:24.44:0,24,456	1/1:5,19:24:48.14:554,48,0	1/1:1,32:33:99:1115,99,0	1/1:7,29:36:78.22:891,78,0	1/1:0,8:8:21.06:242,21,0
chr10	53859824	.	GA	G	5099.12	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=16.178;DP=534;FS=18.033;HRun=8;HaplotypeScore=91.3968;InbreedingCoeff=0.9942;MQ=77.67;MQ0=0;MQRankSum=-15.485;QD=24.05;ReadPosRankSum=0.394;VQSLOD=3.5141;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,111,1315	0/0:15,0:15:39.12:0,39,469	0/0:14,0:14:24.06:0,24,273	0/0:22,0:20:38.91:0,39,388	1/1:1,15:16:36.05:346,36,0	1/1:1,15:16:45.07:434,45,0	1/1:3,9:12:24.03:232,24,0	0/0:33,0:33:87.27:0,87,1049	1/1:3,15:18:48.08:463,48,0	1/1:3,11:14:39.06:375,39,0	1/1:3,16:19:39.06:376,39,0	0/0:19,0:19:48.15:0,48,580	0/0:28,0:28:73.09:0,73,855	1/1:2,19:21:60.10:579,60,0	0/0:28,0:28:81.24:0,81,965	0/0:22,0:22:63.19:0,63,759	0/0:27,0:27:75.22:0,75,894	0/0:12,0:12:33.10:0,33,399	1/1:4,20:24:66.10:633,66,0	1/1:4,12:16:32.94:304,33,0	1/1:2,8:10:21.02:201,21,0	0/0:18,0:18:48.12:0,48,550	0/0:29,0:29:78.20:0,78,924	0/0:16,0:16:45.14:0,45,543	1/1:3,3:6:12.02:115,12,0	1/1:3,8:11:27.04:260,27,0	1/1:1,19:20:54.08:521,54,0	1/1:0,9:9:27.04:260,27,0
chr10	53859839	.	GA	G	7596.30	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=17.889;DP=533;FS=35.133;HRun=2;HaplotypeScore=90.5946;InbreedingCoeff=0.9905;MQ=63.40;MQ0=0;MQRankSum=-17.012;QD=34.69;ReadPosRankSum=-0.203;VQSLOD=2.3191;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,114,1700	0/0:13,0:13:39.13:0,39,578	0/0:11,0:11:33.08:0,33,468	0/0:14,0:12:24.55:0,25,356	1/1:2,17:19:45.15:582,45,0	1/1:0,18:18:54.18:698,54,0	1/1:0,10:10:30.10:388,30,0	0/0:36,0:36:99:0,105,1539	1/1:1,15:16:45.15:583,45,0	1/1:0,17:17:48.16:618,48,0	1/1:0,19:19:48.16:621,48,0	0/0:17,0:17:51.17:0,51,764	0/0:26,0:26:75.25:0,75,1105	1/1:0,19:19:57.19:738,57,0	0/0:28,0:28:78.26:0,78,1169	0/0:24,0:24:69.23:0,69,1033	0/0:31,0:31:93.26:0,93,1330	0/0:16,0:16:45.14:0,45,651	1/1:6,25:31:84.26:1071,84,0	1/1:1,14:15:39.11:489,39,0	1/1:1,8:9:21.07:272,21,0	0/0:14,0:14:42.13:0,42,612	0/0:28,0:28:81.27:0,81,1209	0/0:18,0:18:51.16:0,51,738	1/1:0,4:4:12.04:155,12,0	1/1:2,8:10:27.09:349,27,0	1/1:1,22:23:69.18:875,69,0	1/1:5,4:9:12.04:156,12,0
chr10	53859876	.	A	AT	7415.12	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=11.809;DP=553;FS=45.766;HRun=0;HaplotypeScore=90.2810;InbreedingCoeff=0.9838;MQ=71.41;MQ0=0;MQRankSum=-10.372;QD=30.77;ReadPosRankSum=0.596;VQSLOD=1.8900;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,102,1371	0/0:12,0:12:36:0,36,461	0/0:16,0:16:7.54:0,8,444	0/0:13,0:13:22.17:0,22,247	1/1:0,24:24:41.13:543,41,0	1/1:0,15:15:33.11:467,33,0	1/1:0,17:17:23.89:340,24,0	0/0:32,0:32:90.28:0,90,1214	1/1:0,17:18:39.12:546,39,0	1/1:0,17:17:48.11:659,48,0	1/1:3,15:18:32.72:465,33,0	0/0:18,0:18:50.98:0,51,652	0/0:25,0:25:75.20:0,75,964	1/1:1,19:20:45.12:615,45,0	0/0:21,0:21:63.18:0,63,830	0/0:25,0:25:75.21:0,75,971	0/0:35,0:35:99:0,102,1364	0/0:16,0:16:45.11:0,45,575	1/1:0,20:20:60.15:831,60,0	1/1:0,24:24:59.22:796,59,0	1/1:0,9:9:23.90:283,24,0	0/0:19,0:19:57.17:0,57,763	0/0:28,0:28:77.27:0,77,1019	0/0:18,0:18:54.18:0,54,752	1/1:1,14:15:27.01:360,27,0	1/1:0,12:12:33.09:447,33,0	1/1:0,25:25:63.21:892,63,0	1/1:0,7:7:12.04:170,12,0
chr10	53860035	.	A	ATCATACC	18686.15	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-2.080;DP=637;FS=16.910;HRun=0;HaplotypeScore=139.8385;InbreedingCoeff=0.9923;MQ=95.47;MQ0=0;MQRankSum=-16.842;QD=79.86;ReadPosRankSum=-0.558;VQSLOD=3.9898;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,132,3336	0/0:11,0:11:33.11:0,33,870	0/0:32,0:32:90.31:0,90,2209	0/0:35,0:35:92.82:0,93,2219	1/1:2,18:21:42.14:1687,42,0	1/1:5,4:10:12.04:401,12,0	1/1:2,9:15:27.09:938,27,0	0/0:34,0:34:99:0,102,2585	1/1:1,5:6:15.05:604,15,0	1/1:4,13:21:57.14:1867,57,0	1/1:2,18:21:48.16:1921,48,0	0/0:35,0:35:99:0,105,2660	0/0:36,0:36:99:0,108,2847	1/1:7,9:19:30.10:1124,30,0	0/0:31,0:31:90.31:0,90,2328	0/0:31,0:31:90.31:0,90,2351	0/0:28,0:28:78.27:0,78,2005	0/0:11,0:11:33.08:0,33,812	1/1:2,3:7:21.07:721,21,0	1/1:2,25:27:69.24:2688,69,0	1/1:8,11:23:27.09:1085,27,0	0/0:25,0:25:69.24:0,69,1793	0/0:21,0:21:57.20:0,57,1503	0/0:27,0:27:75.26:0,75,1940	1/1:0,18:19:48.16:1849,48,0	1/1:7,10:19:48.16:1668,48,0	1/1:3,5:11:24.08:807,24,0	1/1:2,11:15:33.11:1328,33,0
chr10	53860190	.	A	AG	6346.02	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=17.625;DP=558;FS=27.740;HRun=1;HaplotypeScore=147.2596;InbreedingCoeff=0.9927;MQ=97.39;MQ0=0;MQRankSum=-17.274;QD=36.90;ReadPosRankSum=-1.280;VQSLOD=2.0670;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,141,1828	0/0:9,0:9:24.08:0,24,312	0/0:31,0:31:80.41:0,80,1054	0/0:32,0:32:96.27:0,96,1194	1/1:0,13:13:26.55:337,27,0	1/1:0,10:10:27.09:402,27,0	1/1:2,15:17:45.15:670,45,0	0/0:31,0:31:84.27:0,84,1090	1/1:0,16:16:45.15:679,45,0	1/1:0,12:12:30.10:450,30,0	1/1:0,7:7:18.06:267,18,0	0/0:44,0:44:99:0,132,1710	0/0:26,0:26:75.24:0,75,974	1/1:1,19:20:45.15:679,45,0	0/0:31,0:31:93.28:0,93,1178	0/0:25,1:26:30.54:0,31,863	0/0:20,0:20:57.18:0,57,739	0/0:15,0:15:45.15:0,45,583	1/1:2,6:8:21.07:308,21,0	1/1:2,22:24:60.20:894,60,0	1/1:0,13:13:26.13:443,26,0	0/0:20,0:20:57.19:0,57,740	0/0:22,0:22:60.18:0,60,764	0/0:29,0:29:84.26:0,84,1075	1/1:1,11:12:27.09:401,27,0	1/1:1,8:9:24.08:359,24,0	1/1:0,6:6:15.05:233,15,0	1/1:0,5:5:15.05:224,15,0
chr10	53860195	.	A	ATCAT	11744.63	PASS	AB=0.963;AC=29;AF=0.518;AN=56;BaseQRankSum=17.922;DP=569;FS=28.281;HRun=0;HaplotypeScore=168.8909;InbreedingCoeff=0.9297;MQ=95.70;MQ0=0;MQRankSum=-17.324;QD=53.14;ReadPosRankSum=-2.609;VQSLOD=3.1332;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,138,2639	0/0:8,0:8:24.08:0,24,479	0/0:29,0:29:81.28:0,81,1535	0/0:33,0:33:96.29:0,96,1808	1/1:7,12:19:30.08:767,30,0	1/1:5,7:12:33.03:663,33,0	1/1:4,11:15:45.15:1201,45,0	0/0:33,0:33:93.29:0,93,1732	1/1:6,13:19:45.15:1199,45,0	1/1:2,11:13:27.09:754,27,0	1/1:2,7:9:18.06:497,18,0	0/0:40,0:40:99:0,120,2359	0/0:26,0:26:78.26:0,78,1516	1/1:9,12:21:42.14:1119,42,0	0/0:28,0:28:84.29:0,84,1636	0/1:25,1:26:11.27:11,0,1251	0/0:19,0:19:57.13:0,57,1096	0/0:17,0:17:48.16:0,48,924	1/1:3,5:8:24.08:623,24,0	1/1:5,20:25:63.21:1689,63,0	1/1:4,11:15:33.11:850,33,0	0/0:21,0:21:63.21:0,63,1212	0/0:20,0:20:54.19:0,54,1074	0/0:26,0:26:78.27:0,78,1544	1/1:6,9:15:30.10:761,30,0	1/1:5,5:10:30.06:704,30,0	1/1:1,6:7:18.03:439,18,0	1/1:2,5:7:21.04:467,21,0
chr10	53860402	.	T	TG	1326.06	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=14.247;DP=610;FS=53.175;HRun=0;HaplotypeScore=149.4057;InbreedingCoeff=0.7717;MQ=82.26;MQ0=0;MQRankSum=-3.593;QD=5.62;ReadPosRankSum=-0.912;VQSLOD=1.4107;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,144,1996	0/0:6,0:6:18.06:0,18,252	0/0:22,0:22:53.27:0,53,762	0/0:22,0:21:56.69:0,57,555	1/1:20,1:21:20.87:146,21,0	1/1:13,0:13:8.38:47,8,0	0/1:13,0:13:2.24:33,0,2	0/0:51,0:51:99:0,150,2024	0/1:13,0:13:3.46:16,0,3	1/1:21,1:22:40.21:250,40,0	1/1:21,1:22:33.04:204,33,0	0/0:30,0:30:90.28:0,90,1224	0/0:17,0:17:51.16:0,51,698	0/1:22,0:22:12.30:50,0,12	0/0:25,0:25:75.21:0,75,986	0/0:29,0:29:87.28:0,87,1201	0/0:33,0:33:99:0,99,1348	0/0:16,0:16:45.13:0,45,610	1/1:15,0:15:3.39:97,3,0	1/1:18,0:18:16.16:110,16,0	1/1:17,1:18:20.61:151,21,0	0/0:25,0:25:75.23:0,75,1016	0/0:26,0:26:72.17:0,72,939	0/0:20,0:20:60.19:0,60,824	1/1:20,0:20:13.17:105,13,0	1/1:19,0:19:31.49:210,31,0	1/1:20,0:20:23.29:115,23,0	0/0:3,0:3:1.17:0,1,3
chr10	53860428	.	TG	T	6923.22	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=18.077;DP=571;FS=35.844;HRun=2;HaplotypeScore=125.7819;InbreedingCoeff=0.9914;MQ=79.59;MQ0=0;MQRankSum=-14.144;QD=31.19;ReadPosRankSum=-0.225;VQSLOD=2.1059;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,157,2338	0/0:10,0:10:30.08:0,30,423	0/0:14,0:14:42.10:0,42,541	0/0:23,0:23:61.34:0,61,863	1/1:0,19:19:39.09:505,39,0	1/1:1,15:16:39.13:506,39,0	1/1:2,14:16:36.12:467,36,0	0/0:34,0:34:87.29:0,87,1281	1/1:0,8:8:24.08:310,24,0	1/1:1,17:18:48.16:623,48,0	1/1:1,20:21:42.14:544,42,0	0/0:26,0:26:75.25:0,75,1124	0/0:18,0:18:54.18:0,54,809	1/1:3,20:23:57.19:739,57,0	0/0:21,0:21:60.20:0,60,899	0/0:33,0:33:99:0,99,1479	0/0:34,0:34:96.27:0,96,1408	0/0:20,0:20:53.77:0,54,774	1/1:1,17:18:45.15:584,45,0	1/1:0,13:13:39.13:506,39,0	1/1:1,14:15:24.08:311,24,0	0/0:19,0:19:54.18:0,54,806	0/0:19,0:19:54.17:0,54,789	0/0:24,0:24:72.24:0,72,1079	1/1:1,15:16:39.13:506,39,0	1/1:0,17:17:48.16:622,48,0	1/1:1,18:19:45.15:583,45,0	1/1:0,3:3:9.03:117,9,0
chr10	53861275	.	C	CAGAGAGAGAGAGAG	14653.43	PASS	AB=0.991;AC=30;AF=0.536;AN=56;BaseQRankSum=1.481;DP=727;FS=5.631;HRun=0;HaplotypeScore=305.3245;InbreedingCoeff=0.7986;MQ=76.71;MQ0=2;MQRankSum=-11.349;QD=32.28;ReadPosRankSum=-5.182;VQSLOD=2.6319;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:84.27:0,84,3171	0/0:15,0:15:33.11:0,33,1257	0/1:51,0:39:9.87:10,0,1085	0/1:64,0:42:22.64:23,0,744	1/1:30,2:32:5.19:404,5,0	1/1:26,7:34:24.08:1563,24,0	1/1:17,2:20:12.04:751,12,0	0/0:35,0:35:57.17:0,57,1846	1/1:18,4:22:12.51:783,13,0	1/1:18,0:19:24.06:1219,24,0	1/1:22,6:29:17.99:1156,18,0	0/0:25,0:27:66.23:0,66,2531	0/0:16,0:18:42.13:0,42,1455	1/1:24,2:28:21.07:1219,21,0	0/0:16,0:19:45.15:0,45,1654	0/0:15,0:15:24.07:0,24,956	0/0:24,0:27:48.16:0,48,1716	0/0:13,0:14:36.12:0,36,1354	1/1:24,3:27:36.59:1663,37,0	1/1:22,3:26:12.02:646,12,0	1/1:13,0:14:3.01:203,3,0	0/0:18,0:21:51.17:0,51,1884	0/0:24,0:25:57.13:0,57,1778	0/0:18,0:20:39.13:0,39,1469	1/1:23,3:29:15.05:855,15,0	1/1:23,2:26:42.14:2270,42,0	1/1:18,4:24:30.10:1447,30,0	1/1:4,0:6:9.03:441,9,0
chr10	53861903	.	GCACTAACAA	G	16744.85	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=19.723;DP=758;FS=4.712;HRun=0;HaplotypeScore=266.3612;InbreedingCoeff=0.9852;MQ=95.04;MQ0=0;MQRankSum=-18.972;QD=54.19;ReadPosRankSum=2.465;VQSLOD=3.8532;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,99,4509	0/0:14,0:14:39.13:0,39,1766	0/0:39,0:39:75.15:0,75,2564	0/0:42,0:42:99:0,117,4637	1/1:4,11:15:32.89:626,33,0	1/1:4,18:22:48.16:1405,48,0	1/1:6,21:27:54.14:1513,54,0	0/0:37,0:37:90.30:0,90,3942	1/1:6,19:25:54.19:1581,54,0	1/1:7,16:23:45.15:1268,45,0	1/1:3,18:21:48.08:1168,48,0	0/0:29,0:29:87.30:0,87,4074	0/0:37,0:37:96.30:0,96,4196	1/1:5,29:34:81.28:2372,81,0	0/0:37,0:37:90.31:0,90,4035	0/0:39,0:39:99:0,105,4630	0/0:35,0:35:93.29:0,93,4058	0/0:16,0:16:45.11:0,45,1953	1/1:8,10:18:30.10:836,30,0	1/1:4,14:18:42.10:1161,42,0	1/1:11,10:21:23.70:700,24,0	0/0:27,0:27:78.27:0,78,3553	0/0:26,0:26:72.25:0,72,3128	0/0:36,0:36:96.31:0,96,4222	1/1:7,12:19:33.11:953,33,0	1/1:9,19:28:57.14:1495,57,0	1/1:8,22:31:51.12:1491,51,0	1/1:4,3:7:6.02:176,6,0
chr10	53862209	.	GACTA	G	14340.24	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=17.395;DP=712;FS=6.459;HRun=0;HaplotypeScore=171.9091;InbreedingCoeff=0.9916;MQ=83.67;MQ0=0;MQRankSum=-19.169;QD=45.96;ReadPosRankSum=2.680;VQSLOD=5.2676;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,114,3010	0/0:8,0:8:24.08:0,24,648	0/0:27,0:27:75.25:0,75,1843	0/0:26,0:26:78.20:0,78,1735	1/1:8,18:26:42.14:792,42,0	1/1:3,19:22:51.17:927,51,0	1/1:3,18:21:51.17:947,51,0	0/0:39,0:39:99:0,111,2988	1/1:2,27:29:75.26:1403,75,0	1/1:1,25:27:78.27:1471,78,0	1/1:3,13:16:33.11:626,33,0	0/0:35,0:35:99:0,99,2615	0/0:33,1:34:61.56:0,62,2492	1/1:1,31:32:90.31:1687,90,0	0/0:42,0:42:99:0,120,3192	0/0:31,1:32:33.41:0,33,2262	0/0:30,0:30:87.30:0,87,2340	0/0:20,0:20:60.21:0,60,1620	1/1:4,13:17:39.13:739,39,0	1/1:1,24:25:63.21:1161,63,0	1/1:7,11:18:27.09:512,27,0	0/0:24,0:24:69.24:0,69,1863	0/0:23,0:23:69.24:0,69,1793	0/0:19,0:19:57.20:0,57,1539	1/1:1,14:15:42.14:793,42,0	1/1:5,21:26:66.23:1252,66,0	1/1:2,33:35:99:1858,99,0	1/1:0,3:3:9.03:171,9,0
chr10	53862593	.	CAACT	C	15807.58	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=16.246;DP=690;FS=6.770;HRun=0;HaplotypeScore=146.8455;InbreedingCoeff=0.9761;MQ=90.71;MQ0=0;MQRankSum=-14.391;QD=52.52;ReadPosRankSum=1.119;VQSLOD=6.0438;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:32:99:0,99,2356	0/0:11,0:11:33.11:0,33,956	0/0:39,0:39:99:0,117,2894	0/0:24,0:24:58.94:0,59,1475	1/1:7,24:31:75.17:1366,75,0	1/1:3,22:25:69.15:1284,69,0	1/1:1,22:23:69.18:1361,69,0	0/0:40,0:40:99:0,117,2868	1/1:4,11:15:42.13:817,42,0	1/1:7,21:28:77.95:1433,78,0	1/1:2,10:12:35.95:568,36,0	0/0:33,0:33:99:0,99,2460	0/0:32,0:32:96.31:0,96,2573	1/1:4,23:27:81.20:1549,81,0	0/0:25,0:25:75.24:0,75,2062	0/0:21,0:21:63.21:0,63,1720	0/0:33,0:33:99:0,99,2684	0/0:18,0:18:54.16:0,54,1435	1/1:5,14:19:57.08:1023,57,0	1/1:3,16:19:54.03:980,54,0	1/1:4,15:19:49.58:920,50,0	0/0:37,0:37:99:0,111,2951	0/0:23,0:23:69.22:0,69,1935	0/0:20,0:20:57.20:0,57,1596	1/1:5,22:27:81.13:1453,81,0	1/1:4,25:29:78.24:1498,78,0	1/1:4,21:25:75.26:1491,75,0	1/1:0,2:2:3.01:63,3,0
chr10	53862642	.	A	AT	11962.54	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=0.689;DP=716;FS=3.787;HRun=2;HaplotypeScore=104.4539;InbreedingCoeff=0.9976;MQ=87.58;MQ0=0;MQRankSum=-6.155;QD=33.79;ReadPosRankSum=2.346;VQSLOD=4.8618;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:72.23:0,72,891	0/0:10,0:10:27.08:0,27,334	0/0:32,0:32:84.25:0,84,1027	0/0:24,0:24:69.20:0,69,849	1/1:4,26:30:51.13:711,51,0	1/1:2,31:33:81.27:1165,81,0	1/1:5,18:22:48.13:669,48,0	0/0:43,0:43:99:0,120,1477	1/1:1,15:16:39.13:561,39,0	1/1:2,23:25:66.22:950,66,0	1/1:1,19:20:50.91:734,51,0	0/0:31,0:31:90.28:0,90,1115	0/0:39,0:39:99:0,111,1362	1/1:4,25:29:75.18:1034,75,0	0/0:24,0:23:69.15:0,69,813	0/0:23,0:23:69.22:0,69,856	0/0:24,0:24:69.22:0,69,854	0/0:28,0:28:84.26:0,84,1040	1/1:4,22:25:72.16:959,72,0	1/1:5,28:33:78.26:1122,78,0	1/1:1,16:17:37.30:521,37,0	0/0:26,0:26:75.24:0,75,930	0/0:15,0:15:36.10:0,36,434	0/0:16,0:16:42.13:0,42,521	1/1:2,31:33:81.27:1165,81,0	1/1:5,25:30:72.22:1016,72,0	1/1:4,28:32:79.46:1140,79,0	1/1:0,7:7:15.05:216,15,0
chr10	53863043	.	C	CAGT	21462.58	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=12.318;DP=820;FS=0.849;HRun=0;HaplotypeScore=126.6251;InbreedingCoeff=0.9955;MQ=81.74;MQ0=0;MQRankSum=-6.777;QD=56.63;ReadPosRankSum=0.839;VQSLOD=6.6071;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,154,2544	0/0:8,0:8:12.04:0,12,200	0/0:28,0:28:78.21:0,78,1210	0/0:20,0:20:51.14:0,51,793	1/1:5,25:30:75.26:1698,75,0	1/1:1,17:20:51.18:1153,51,0	1/1:5,18:23:60.21:1356,60,0	0/0:34,0:34:87.29:0,87,1410	1/1:1,21:22:57.20:1289,57,0	1/1:7,32:41:99:2290,108,0	1/1:1,17:19:48.16:1087,48,0	0/0:32,0:32:90.30:0,90,1467	0/0:32,0:32:90.31:0,90,1487	1/1:5,28:34:78.22:1715,78,0	0/0:38,0:38:99:0,111,1824	0/0:33,0:33:87.30:0,87,1445	0/0:38,0:38:99:0,108,1738	0/0:25,0:25:72.25:0,72,1183	1/1:7,26:33:93.32:2046,93,0	1/1:2,26:29:78.27:1766,78,0	1/1:3,32:35:80.14:1833,80,0	0/0:20,0:20:51.16:0,51,821	0/0:34,0:34:93.32:0,93,1549	0/0:45,0:45:99:0,126,2056	1/1:3,20:22:57.20:1290,57,0	1/1:3,23:27:72.23:1556,72,0	1/1:6,28:34:84.25:1842,84,0	1/1:0,8:8:24.08:544,24,0
chr10	53864233	.	A	AT	8512.25	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-12.511;DP=548;FS=2.873;HRun=8;HaplotypeScore=48.4032;InbreedingCoeff=0.9971;MQ=69.60;MQ0=0;MQRankSum=-0.354;QD=28.47;ReadPosRankSum=0.731;VQSLOD=5.1383;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:51:0,51,461	0/0:7,0:7:21.01:0,21,192	0/0:10,0:9:21.01:0,21,189	0/0:10,0:10:17.80:0,18,150	1/1:8,24:32:90.21:1006,90,0	1/1:6,12:18:45.13:519,45,0	1/1:5,14:19:33.10:381,33,0	0/0:34,0:34:93.03:0,93,847	1/1:3,17:20:51.15:588,51,0	1/1:4,20:24:60.18:692,60,0	1/1:4,17:21:63.16:708,63,0	0/0:18,0:18:51.01:0,51,461	0/0:20,0:20:44.89:0,45,399	1/1:1,22:23:57.17:658,57,0	0/0:20,0:20:51.01:0,51,467	0/0:24,0:24:69.03:0,69,631	0/0:18,0:18:48.02:0,48,439	0/0:19,0:19:45.02:0,45,411	1/1:4,14:18:42.12:484,42,0	1/1:1,28:29:81.24:935,81,0	1/1:5,5:10:20.99:215,21,0	0/0:16,0:16:48.03:0,48,439	0/0:17,0:17:48.01:0,48,433	0/0:17,0:17:42:0,42,384	1/1:7,11:18:42.12:485,42,0	1/1:8,14:22:54.14:605,54,0	1/1:6,25:31:75.22:866,75,0	1/1:6,8:14:33.08:371,33,0
chr10	53864822	.	CA	C	10669.54	PASS	AB=0.538;AC=27;AF=0.482;AN=56;BaseQRankSum=18.657;DP=617;FS=10.403;HRun=1;HaplotypeScore=97.5593;InbreedingCoeff=0.9280;MQ=79.38;MQ0=0;MQRankSum=-2.101;QD=34.98;ReadPosRankSum=1.852;VQSLOD=4.1215;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,129,1981	0/0:11,0:11:33.10:0,33,501	0/0:13,0:13:39.10:0,39,545	0/0:17,0:17:45.15:0,45,693	1/1:0,16:16:30.54:401,31,0	1/1:0,25:25:57.19:797,57,0	1/1:0,35:35:90.30:1258,90,0	0/0:26,0:26:78.26:0,78,1223	1/1:0,15:15:39.13:545,39,0	1/1:0,19:19:57.18:773,57,0	1/1:0,15:15:24.08:328,24,0	0/0:33,0:33:93.28:0,93,1403	0/0:22,0:22:66.22:0,66,1048	1/1:0,28:28:75.25:1048,75,0	0/0:19,0:19:57.19:0,57,899	0/0:15,0:15:45.14:0,45,696	0/0:35,0:35:99:0,105,1643	0/0:35,0:35:99:0,102,1575	1/1:0,17:17:45.12:608,45,0	1/1:0,14:14:33.06:428,33,0	1/1:0,35:35:90.30:1258,90,0	0/0:13,0:13:39.13:0,39,614	0/0:12,0:12:33.11:0,33,514	0/0:14,0:14:42.14:0,42,671	1/1:2,20:22:63.20:865,63,0	1/1:0,27:27:81.23:1095,81,0	1/1:0,23:23:69.23:961,69,0	0/1:2,12:14:65.57:305,0,66
chr10	53865194	.	C	CAAAA	6977.81	PASS	AB=0.523;AC=29;AF=0.518;AN=56;BaseQRankSum=6.126;DP=507;FS=0.000;HRun=13;HaplotypeScore=112.1269;InbreedingCoeff=0.8541;MQ=64.19;MQ0=3;MQRankSum=-8.835;QD=27.80;ReadPosRankSum=-6.472;VQSLOD=1.9841;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:30:68.73:0,69,858	0/0:9,0:10:28.33:0,28,345	0/0:21,0:18:4.97:0,5,23	0/0:13,0:6:5.83:0,6,45	1/1:10,6:21:37.21:560,37,0	1/1:9,3:19:36.12:734,36,0	1/1:9,1:14:24.08:478,24,0	0/0:26,0:27:55.26:0,55,705	1/1:3,2:8:18.06:367,18,0	1/1:12,6:20:36.12:663,36,0	1/1:11,6:21:31.86:518,32,0	0/0:19,0:21:24.45:0,24,291	0/0:16,0:18:13.76:0,14,345	1/1:5,0:8:7.75:61,8,0	0/0:20,0:21:35.44:0,35,441	0/0:16,0:17:15.76:0,16,363	0/0:3,0:19:6.14:0,6,21	0/1:2,0:23:10.27:10,0,50	1/1:13,5:21:45.02:712,45,0	1/1:6,4:13:24.03:438,24,0	1/1:2,6:10:13.86:217,14,0	0/0:20,0:20:47.94:0,48,608	0/0:19,0:21:52.23:0,52,634	0/0:14,0:17:35.39:0,35,409	1/1:7,4:25:57.20:1146,57,0	1/1:8,7:20:36.02:470,36,0	1/1:12,6:21:25.38:471,25,0	1/1:5,2:7:6.02:133,6,0
chr10	53866221	.	CT	C	14019.70	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=20.235;DP=716;FS=7.881;HRun=1;HaplotypeScore=121.8170;InbreedingCoeff=0.9987;MQ=81.08;MQ0=0;MQRankSum=-2.693;QD=36.51;ReadPosRankSum=3.076;VQSLOD=4.0599;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,132,2072	0/0:6,0:6:18.06:0,18,288	0/0:22,0:22:60.12:0,60,814	0/0:18,0:18:47.59:0,48,581	1/1:0,21:21:51.17:705,51,0	1/1:0,24:24:57.19:794,57,0	1/1:0,24:24:63.21:861,63,0	0/0:28,0:28:84.27:0,84,1291	1/1:0,24:24:63.21:866,63,0	1/1:0,20:20:53.77:651,54,0	1/1:0,28:28:72.23:1002,72,0	0/0:40,0:40:99:0,120,1802	0/0:32,0:32:96.27:0,96,1454	1/1:0,28:28:75.25:1032,75,0	0/0:45,0:45:99:0,135,2129	0/0:41,0:40:99:0,123,1825	1/1:0,24:24:60.20:838,60,0	1/1:0,15:15:39.13:544,39,0	1/1:0,18:18:50.90:633,51,0	1/1:0,30:30:75.25:1042,75,0	1/1:0,38:38:99:1422,102,0	0/0:25,0:25:69.19:0,69,1030	0/0:18,0:18:51.16:0,51,786	0/0:13,0:13:39.08:0,39,572	1/1:0,26:26:78.26:1077,78,0	1/1:0,33:33:96.30:1309,96,0	1/1:0,22:22:63.08:868,63,0	1/1:0,9:9:27.09:376,27,0
chr10	53866349	.	TA	T	12013.45	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=6.913;DP=687;FS=5.127;HRun=2;HaplotypeScore=73.8124;InbreedingCoeff=0.9973;MQ=66.46;MQ0=0;MQRankSum=-1.909;QD=35.23;ReadPosRankSum=1.482;VQSLOD=5.3984;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:84.26:0,84,1235	0/0:9,0:9:27.09:0,27,399	0/0:18,0:17:48.14:0,48,660	0/0:6,0:6:17.91:0,18,185	1/1:1,28:29:83.97:1044,84,0	1/1:0,21:21:54.18:699,54,0	1/1:1,19:20:51.17:661,51,0	0/0:28,0:28:18.14:0,18,220	1/1:0,22:22:63.20:817,63,0	1/1:0,33:33:99:1285,99,0	1/1:0,22:22:60.20:778,60,0	0/0:33,0:33:99:0,99,1444	0/0:31,0:31:90.30:0,90,1347	1/1:0,26:26:72.23:932,72,0	0/0:40,0:40:99:0,117,1751	0/0:34,0:34:99:0,102,1465	0/0:23,0:23:40.03:0,40,250	0/0:19,0:19:52.50:0,53,239	1/1:0,17:17:51.13:629,51,0	1/1:1,36:37:99:1327,105,0	1/1:0,16:16:33.11:428,33,0	0/0:34,0:34:99:0,102,1461	0/0:30,0:30:90.30:0,90,1344	0/0:13,0:13:36.06:0,36,485	1/1:0,26:26:75.24:973,75,0	1/1:0,31:31:93.23:1157,93,0	1/1:0,29:29:75.24:973,75,0	1/1:0,12:12:24.08:311,24,0
chr10	53870387	.	TACA	T	7308.56	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=9.993;DP=619;FS=4.498;HRun=0;HaplotypeScore=87.2811;InbreedingCoeff=0.9722;MQ=71.25;MQ0=0;MQRankSum=2.136;QD=22.28;ReadPosRankSum=3.580;VQSLOD=4.6083;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:54.03:0,54,921	0/0:3,0:3:6.02:0,6,122	0/0:28,0:23:36.03:0,36,454	0/0:18,0:18:29.26:0,29,502	1/1:9,23:32:32.16:618,32,0	1/1:6,21:27:45.15:641,45,0	1/1:3,13:16:21.07:299,21,0	0/0:15,0:27:45.07:0,45,564	1/1:5,17:22:33.11:470,33,0	1/1:6,17:23:51.04:565,51,0	1/1:6,21:27:39.13:555,39,0	0/0:17,0:17:39.10:0,39,676	0/0:32,0:32:81.23:0,81,1437	1/1:1,17:18:36.12:513,36,0	0/0:22,0:22:57.13:0,57,948	0/0:20,0:20:45.09:0,45,706	0/0:3,0:15:27.49:0,27,334	0/0:4,0:17:9.02:0,9,105	1/1:7,13:20:39.10:510,39,0	1/1:6,22:28:54.14:746,54,0	1/1:2,8:10:15.05:214,15,0	0/0:25,0:25:63.16:0,63,1085	0/0:29,0:29:72.16:0,72,1203	0/0:14,0:14:27.07:0,27,476	1/1:8,25:33:48.16:683,48,0	1/1:10,24:34:72.12:899,72,0	1/1:5,18:23:26.78:383,27,0	1/1:2,13:15:15.05:214,15,0
chr10	53870633	.	TATAA	T	2099.54	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.824;DP=527;FS=2.969;HRun=0;HaplotypeScore=82.1650;InbreedingCoeff=0.9909;MQ=80.10;MQ0=0;MQRankSum=-4.737;QD=45.64;ReadPosRankSum=1.203;VQSLOD=4.1719;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:54.19:0,54,1448	0/0:9,0:9:27.09:0,27,729	0/0:16,0:16:48.16:0,48,1211	0/0:12,0:12:36.12:0,36,941	0/0:38,0:38:99:0,102,2697	0/0:20,0:20:54.19:0,54,1439	0/0:13,0:13:39.13:0,39,1053	0/0:34,0:34:96.32:0,96,2529	0/0:13,0:13:39.13:0,39,1040	0/0:29,0:29:87.30:0,87,2323	0/0:25,0:25:69.24:0,69,1862	0/0:11,0:11:33.11:0,33,878	0/0:18,0:18:54.19:0,54,1458	0/0:15,0:15:42.14:0,42,1131	0/0:23,0:22:63.22:0,63,1687	0/0:16,0:16:48.15:0,48,1241	1/1:4,19:23:48.16:911,48,0	1/1:0,23:23:69.24:1310,69,0	0/0:16,0:16:42.14:0,42,1123	0/0:22,0:22:66.23:0,66,1741	0/0:13,0:13:39.13:0,39,1039	0/0:13,0:13:39.13:0,39,1052	0/0:26,0:26:72.25:0,72,1938	0/0:11,0:11:33.11:0,33,892	0/0:23,0:23:66.23:0,66,1776	0/0:19,0:19:57.20:0,57,1513	0/0:21,0:21:63.22:0,63,1700	0/0:7,0:7:15.05:0,15,405
chr10	53871322	.	C	CAT	1850.72	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-10.650;DP=482;FS=2.034;HRun=0;HaplotypeScore=54.9270;InbreedingCoeff=0.7352;MQ=63.32;MQ0=0;MQRankSum=2.249;QD=38.56;ReadPosRankSum=-5.559;VQSLOD=3.6567;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:47.68:0,48,590	0/0:11,0:11:30.08:0,30,365	0/0:5,0:4:2.98:0,3,22	0/0:5,0:4:6.02:0,6,74	0/0:22,0:22:60.18:0,60,745	0/0:23,0:23:63.19:0,63,782	0/0:8,0:8:24.08:0,24,303	1/1:2,45:48:99:1945,129,0	0/0:17,0:17:45.14:0,45,567	0/0:16,0:16:45.14:0,45,557	0/0:22,0:22:51.15:0,51,629	0/0:18,0:18:45.11:0,45,530	0/0:19,0:19:48.14:0,48,594	0/0:23,0:23:60.16:0,60,719	0/0:21,0:21:48.14:0,48,592	0/0:15,0:15:45.12:0,45,543	0/0:21,0:21:51.13:0,51,626	0/0:18,0:18:39.12:0,39,492	0/0:21,0:21:42.13:0,42,530	0/0:17,0:18:47.97:0,48,567	0/0:10,0:10:21.04:0,21,238	0/0:7,0:7:12.04:0,12,151	0/0:7,0:7:12.03:0,12,140	0/0:10,0:10:24.08:0,24,303	0/0:10,0:10:21.04:0,21,238	0/0:22,0:22:54.16:0,54,667	0/0:31,0:31:81.26:0,81,1021	0/0:10,0:10:30.06:0,30,348
chr10	53873133	.	A	ATGGAACAC	35351.98	PASS	AB=0.968;AC=35;AF=0.625;AN=56;BaseQRankSum=-7.489;DP=631;FS=25.709;HRun=0;HaplotypeScore=141.8676;InbreedingCoeff=0.9205;MQ=79.46;MQ0=0;MQRankSum=-20.117;QD=99.30;ReadPosRankSum=-0.914;VQSLOD=3.5057;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,123,3559	0/0:7,0:7:21.07:0,21,631	0/0:24,0:24:72.21:0,72,1962	0/0:25,0:25:72.22:0,72,1947	1/1:7,24:36:84.29:3195,84,0	1/1:8,13:22:57.20:2260,57,0	1/1:4,13:18:48.16:2061,48,0	1/1:7,10:17:48.16:1719,48,0	1/1:3,19:23:60.21:2757,60,0	1/1:5,17:26:75.21:3130,75,0	1/1:4,11:16:42.14:1785,42,0	0/0:32,0:32:93.32:0,93,2787	0/0:54,0:54:99:0,157,4550	1/1:5,18:25:66.23:2898,66,0	0/0:25,0:25:75.26:0,75,2271	0/1:29,1:30:99:153,0,2378	1/1:3,13:18:39.13:1755,39,0	1/1:4,3:6:15.05:693,15,0	1/1:4,5:9:24.08:1027,24,0	1/1:3,17:22:60.21:2631,60,0	1/1:5,8:13:33.11:1248,33,0	0/0:24,0:24:72.23:0,72,2070	0/0:22,0:22:66.23:0,66,1999	0/0:20,0:20:60.21:0,60,1809	1/1:4,15:20:54.19:2360,54,0	1/1:2,20:24:69.20:2899,69,0	1/1:1,13:15:39.13:1652,39,0	1/1:4,6:10:30.10:1129,30,0
chr10	53875300	.	AGC	A	5538.43	PASS	AB=1.000;AC=40;AF=0.714;AN=56;BaseQRankSum=-1.297;DP=648;FS=10.193;HRun=0;HaplotypeScore=88.2570;InbreedingCoeff=0.3743;MQ=59.53;MQ0=37;MQRankSum=-2.304;QD=10.67;ReadPosRankSum=-7.580;VQSLOD=1.3736;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:23:51.25:0,51,360	0/1:13,0:12:33.03:33,0,119	0/1:35,0:9:11.63:21,0,12	0/1:57,0:21:33.77:34,0,87	1/1:9,6:14:14.75:117,15,0	1/1:27,0:25:42.16:349,42,0	1/1:19,0:18:26.55:196,27,0	1/1:28,0:27:65.63:553,66,0	1/1:25,0:24:50.59:425,51,0	1/1:14,0:14:39:362,39,0	1/1:23,0:23:41.93:348,42,0	0/1:18,0:21:23.34:23,0,114	0/0:24,0:24:4.37:0,4,344	1/1:19,0:18:2.97:20,3,0	0/0:25,0:25:20.30:0,20,365	0/0:25,0:25:3.80:0,4,353	1/1:17,0:16:44.82:352,45,0	1/1:11,0:11:2.98:21,3,0	1/1:11,0:11:29.94:258,30,0	1/1:18,0:17:35.73:294,36,0	1/1:19,0:17:35.91:292,36,0	0/0:30,0:30:13.52:0,14,355	0/1:21,0:20:12.13:12,0,239	0/1:37,0:37:71.78:72,0,433	1/1:22,0:22:50.90:427,51,0	1/1:32,0:31:85.61:738,86,0	1/1:16,0:16:46.64:360,47,0	1/1:19,0:14:29.86:232,30,0
chr10	53875302	.	CGA	C	44.39	PASS	AB=0.981;AC=20;AF=0.357;AN=56;BaseQRankSum=3.273;DP=642;FS=3.402;HRun=0;HaplotypeScore=106.9064;InbreedingCoeff=0.1240;MQ=60.79;MQ0=37;MQRankSum=-0.512;QD=0.15;ReadPosRankSum=0.624;VQSLOD=1.7105;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:25:54.14:0,54,716	0/0:13,0:12:19.88:0,20,272	0/0:35,0:9:23.51:0,24,211	0/0:58,1:23:4.28:0,4,253	0/0:14,0:13:0.94:0,1,2	0/1:25,0:23:0.34:0,0,0	1/1:17,0:16:1.15:3,1,0	0/0:29,0:28:10.28:0,10,90	1/1:23,0:22:1.66:4,2,0	0/1:15,0:15:6.36:6,0,22	1/1:20,0:20:0.66:2,1,0	0/1:23,0:23:30.08:30,0,400	0/0:22,0:22:2.75:0,3,448	0/1:20,0:19:7.61:8,0,19	0/0:26,0:26:42.60:0,43,607	0/0:23,0:23:3.23:0,3,490	0/1:16,0:15:7.51:8,0,14	0/0:11,0:11:0.47:0,0,1	0/0:12,0:12:0.47:0,0,1	1/1:15,0:14:0.51:2,1,0	1/1:19,0:17:0.44:1,0,0	0/0:27,1:28:35.44:0,35,733	0/1:18,4:21:2.20:2,0,488	0/1:39,0:39:76:76,0,792	0/0:23,0:23:3.42:0,3,26	1/1:30,0:29:1.38:9,1,0	0/1:16,0:16:8.45:8,0,19	0/0:19,0:14:0.94:0,1,2
chr10	53875857	.	A	AG	15756.76	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=20.684;DP=659;FS=3.797;HRun=0;HaplotypeScore=118.8950;InbreedingCoeff=0.9997;MQ=82.38;MQ0=0;MQRankSum=-3.702;QD=41.57;ReadPosRankSum=3.525;VQSLOD=4.5023;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:57.18:0,57,780	0/0:11,0:11:33.11:0,33,461	0/0:23,0:23:63.19:0,63,850	0/0:17,0:17:48.16:0,48,671	1/1:0,41:41:99:1651,117,0	1/1:0,22:22:63.14:911,63,0	1/1:0,16:16:45.15:672,45,0	0/0:28,0:27:81.26:0,81,1118	1/1:0,19:19:57.19:846,57,0	1/1:0,35:35:99:1532,105,0	1/1:0,27:27:75.17:1088,75,0	0/0:27,0:27:81.26:0,81,1115	0/0:34,0:34:99:0,102,1411	1/1:0,20:20:60.20:895,60,0	0/0:27,0:27:81.24:0,81,1099	0/0:28,0:28:84.28:0,84,1175	1/1:0,23:23:60.20:891,60,0	1/1:0,12:12:36.05:510,36,0	1/1:3,18:21:60.19:858,60,0	1/1:0,35:35:93.25:1356,93,0	1/1:0,10:10:24.08:359,24,0	0/0:22,0:22:66.21:0,66,906	0/0:24,0:24:72.23:0,72,991	0/0:19,0:19:57.17:0,57,765	1/1:0,23:23:69.16:994,69,0	1/1:0,29:29:84.27:1227,84,0	1/1:0,27:27:75.25:1115,75,0	1/1:0,19:19:57.19:852,57,0
chr10	53876806	.	GAC	G	64.04	PASS	AB=0.994;AC=16;AF=0.308;AN=52;BaseQRankSum=1.886;DP=690;FS=1.806;HRun=0;HaplotypeScore=130.5874;InbreedingCoeff=-0.0473;MQ=44.97;MQ0=49;MQRankSum=1.931;QD=0.22;ReadPosRankSum=2.317;VQSLOD=2.1147;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:44,1:44:16.33:16,0,565	0/1:11,0:9:22.23:22,0,27	./.	./.	1/1:17,0:12:0.47:1,0,0	0/0:22,0:22:5.98:0,6,47	0/0:22,0:17:7.79:0,8,62	0/0:32,0:27:12.52:0,13,104	0/0:21,0:18:1.96:0,2,21	0/0:24,0:17:9.42:0,9,70	1/1:13,0:11:0.47:1,0,0	0/1:40,0:39:41.27:41,0,693	0/0:21,1:21:1.21:0,1,429	1/1:23,0:22:1.74:6,2,0	0/1:39,1:40:34.98:35,0,763	0/1:19,0:18:9.77:10,0,378	0/0:21,0:20:1.03:0,1,18	0/1:20,0:18:0.46:2,0,0	0/0:20,0:16:5.87:0,6,44	1/1:13,0:10:0.82:2,1,0	0/0:64,0:55:7.04:0,7,86	0/1:29,0:27:34.31:34,0,472	0/1:15,0:13:14.28:14,0,173	0/0:33,1:33:15.07:0,15,758	0/0:21,0:18:6.32:0,6,36	0/0:24,0:17:15.89:0,16,100	0/0:11,0:10:5.98:0,6,46	0/0:5,0:5:5.64:0,6,39
chr10	53878403	.	TA	T	8132	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=18.027;DP=638;FS=3.535;HRun=8;HaplotypeScore=99.7164;InbreedingCoeff=0.9969;MQ=79.61;MQ0=0;MQRankSum=-2.393;QD=25.33;ReadPosRankSum=2.801;VQSLOD=5.1622;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,99,1196	0/0:9,0:9:27.08:0,27,326	0/0:13,0:13:27.08:0,27,326	0/0:17,0:17:36.11:0,36,426	1/1:3,31:34:93.14:898,93,0	1/1:1,25:26:75.12:724,75,0	1/1:2,18:20:51.08:493,51,0	0/0:36,1:37:81.25:0,81,979	1/1:2,25:27:66.11:637,66,0	1/1:3,23:26:72.10:686,72,0	1/1:1,31:32:84.13:811,84,0	0/0:22,0:22:60.15:0,60,709	0/0:27,0:27:78.24:0,78,941	1/1:1,17:18:42.07:406,42,0	0/0:22,0:22:60.17:0,60,714	0/0:29,0:29:81.24:0,81,968	0/0:21,0:21:63.18:0,63,750	0/0:19,0:19:48.13:0,48,564	1/1:2,12:14:36.05:348,36,0	1/1:4,21:25:63.10:608,63,0	1/1:2,8:10:24.04:232,24,0	0/0:9,0:9:24.07:0,24,290	0/0:31,0:31:90.28:0,90,1087	0/0:27,0:27:78.24:0,78,942	1/1:0,28:28:72.12:695,72,0	1/1:2,19:21:57.09:550,57,0	1/1:4,31:35:93.14:898,93,0	1/1:0,5:5:15.02:145,15,0
chr10	53880791	.	TC	T	15708.66	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=15.819;DP=755;FS=0.550;HRun=2;HaplotypeScore=73.3556;InbreedingCoeff=1.0000;MQ=88.19;MQ0=0;MQRankSum=-6.013;QD=36.79;ReadPosRankSum=3.395;VQSLOD=5.4896;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:57.13:0,57,807	0/0:13,0:13:39.13:0,39,572	0/0:20,0:20:54.07:0,54,762	0/0:33,0:33:96.32:0,96,1431	1/1:0,41:41:99:1480,114,0	1/1:0,27:27:78.25:1013,78,0	1/1:0,26:26:72.23:935,72,0	0/0:30,0:30:87.29:0,87,1303	1/1:0,17:17:48.16:623,48,0	1/1:1,37:38:99:1403,108,0	1/1:0,22:22:60.19:769,60,0	0/0:39,0:39:99:0,117,1709	0/0:35,0:35:99:0,102,1488	1/1:1,34:35:96.31:1247,96,0	0/0:36,0:36:99:0,108,1618	0/0:29,1:30:51.35:0,51,1265	1/1:0,24:24:66.21:857,66,0	1/1:0,20:20:57.19:740,57,0	1/1:0,14:14:42.12:529,42,0	1/1:0,29:29:87.28:1129,87,0	1/1:0,25:25:69.22:896,69,0	0/0:28,0:28:84.27:0,84,1238	0/0:26,0:26:78.25:0,78,1133	0/0:18,0:18:51.16:0,51,740	1/1:0,22:22:63.20:818,63,0	1/1:0,32:32:96.31:1245,96,0	1/1:0,37:37:99:1323,102,0	1/1:0,18:18:54.18:701,54,0
chr10	53881271	.	CAT	C	541.45	PASS	AB=1.000;AC=24;AF=0.429;AN=56;BaseQRankSum=-6.718;DP=222;FS=0.747;HRun=0;HaplotypeScore=51.7640;InbreedingCoeff=0.4722;MQ=63.87;MQ0=1;MQRankSum=0.292;QD=8.88;ReadPosRankSum=-3.321;VQSLOD=2.6566;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,6:7:12.04:149,12,0	1/1:0,6:6:8.87:111,9,0	1/1:7,0:4:0.10:0,0,0	0/0:17,0:4:3.84:0,4,13	0/1:7,0:7:10.54:11,0,72	0/0:14,0:14:15.11:0,15,236	1/1:2,0:2:0.47:1,0,0	0/0:18,0:17:6.76:0,7,19	0/0:6,0:6:8.90:0,9,158	0/1:6,0:6:14.89:15,0,22	0/0:9,0:9:1.28:0,1,129	1/1:0,3:3:6.02:74,6,0	1/1:2,1:3:3.01:37,3,0	0/0:5,0:5:2.51:0,3,93	1/1:8,0:8:6.02:74,6,0	1/1:4,0:4:12.01:124,12,0	0/0:9,0:9:8.02:0,8,57	0/0:9,0:9:8.69:0,9,61	0/0:24,0:24:25.67:0,26,377	0/0:5,0:5:11.90:0,12,131	0/0:3,0:3:6.02:0,6,68	1/1:1,1:2:3.01:37,3,0	1/1:3,1:4:3.01:37,3,0	1/1:1,1:2:3.01:37,3,0	0/0:7,0:7:7.46:0,7,151	0/0:5,0:5:3.01:0,3,33	0/0:15,0:15:29.54:0,30,369	0/0:15,0:15:5.61:0,6,303
chr10	53883372	.	GT	G	3577.84	PASS	AB=0.728;AC=28;AF=0.500;AN=56;BaseQRankSum=4.326;DP=496;FS=5.139;HRun=11;HaplotypeScore=92.5446;InbreedingCoeff=0.7388;MQ=61.41;MQ0=3;MQRankSum=-6.887;QD=12.92;ReadPosRankSum=3.137;VQSLOD=3.8559;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:18:36.04:0,36,360	0/0:8,0:8:24.01:0,24,230	0/1:19,2:11:7.84:8,0,52	0/0:18,0:9:6.01:0,6,58	1/1:4,11:13:17.95:147,18,0	0/1:4,17:20:19.03:275,0,19	1/1:4,11:15:35.92:295,36,0	0/0:37,0:35:58.43:0,58,256	1/1:5,12:17:26.90:221,27,0	1/1:4,13:14:32.95:269,33,0	1/1:3,10:14:22.98:178,23,0	0/0:16,1:17:14.43:0,14,344	0/0:19,0:19:39.05:0,39,396	1/1:4,19:23:47.90:392,48,0	0/0:18,0:18:27.03:0,27,262	0/0:21,0:21:33.07:0,33,345	0/0:18,0:18:24.05:0,24,142	0/0:21,0:20:40.13:0,40,192	1/1:8,10:18:20.94:295,21,0	1/1:3,13:15:32.93:270,33,0	1/1:3,5:8:11.94:95,12,0	0/0:12,0:13:23.88:0,24,230	0/1:9,1:10:0.56:1,0,193	0/0:9,0:9:21.03:0,21,209	1/1:6,17:21:32.91:270,33,0	1/1:3,16:16:38.93:318,39,0	1/1:3,23:23:50.89:418,51,0	0/1:2,11:11:10.99:127,0,11
chr10	53883380	.	T	TG	2228.60	PASS	AB=0.632;AC=5;AF=0.089;AN=56;BaseQRankSum=-4.429;DP=524;FS=10.450;HRun=0;HaplotypeScore=103.2450;InbreedingCoeff=0.8011;MQ=55.70;MQ0=3;MQRankSum=4.695;QD=25.91;ReadPosRankSum=-0.600;VQSLOD=3.5106;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:19:53.96:0,54,599	0/0:10,0:9:26.98:0,27,300	0/0:27,0:12:20.81:0,21,176	0/0:15,0:5:11.98:0,12,128	0/0:17,0:15:20.46:0,20,118	0/0:19,0:18:46.66:0,47,325	0/0:19,0:19:37.68:0,38,214	1/1:14,27:39:99:1340,114,0	0/0:19,0:19:39.28:0,39,263	0/0:16,0:13:28.27:0,28,182	0/0:14,0:14:30.63:0,31,185	0/0:18,0:18:48.06:0,48,580	0/0:17,0:17:51.08:0,51,610	0/0:23,0:23:57.48:0,57,344	0/0:15,0:15:45.03:0,45,469	0/0:18,0:18:51.11:0,51,604	1/1:10,11:21:28.24:439,28,0	0/1:10,14:23:6.92:579,0,7	0/0:18,0:19:17.16:0,17,147	0/0:18,0:17:38.80:0,39,235	0/0:9,0:9:24.27:0,24,143	0/0:14,0:13:25.46:0,25,322	0/0:15,0:13:38.91:0,39,408	0/0:10,0:10:21.04:0,21,259	0/0:21,0:19:46.56:0,47,298	0/0:23,0:20:33.85:0,34,252	0/0:27,0:23:61.21:0,61,365	0/0:15,0:12:23.57:0,24,179
chr10	53883391	.	T	TG	3087.84	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=10.770;DP=529;FS=44.124;HRun=0;HaplotypeScore=102.7056;InbreedingCoeff=0.9077;MQ=58.44;MQ0=3;MQRankSum=-7.354;QD=10.29;ReadPosRankSum=2.971;VQSLOD=1.8621;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:20:51.96:0,52,578	0/0:8,0:7:21.06:0,21,262	0/0:33,0:15:23.03:0,23,246	0/0:18,0:6:11.79:0,12,94	1/1:18,0:16:29.23:142,29,0	1/1:18,0:17:29.97:143,30,0	1/1:18,0:18:45.13:231,45,0	1/1:16,23:38:99:1066,105,0	1/1:20,0:20:45.06:225,45,0	1/1:18,0:15:32.31:137,32,0	1/1:16,0:16:15.39:112,15,0	0/0:18,0:18:51.09:0,51,584	0/0:17,0:17:51.03:0,51,531	1/1:26,0:26:32.24:177,32,0	0/0:12,0:12:36.05:0,36,433	0/0:18,0:18:49:0,49,579	0/0:21,0:21:16.95:0,17,179	0/0:23,0:23:0.25:0,0,107	1/1:15,0:15:15.34:178,15,0	0/1:20,0:19:1.95:91,0,2	1/1:10,0:10:16.85:89,17,0	0/0:12,0:11:24.05:0,24,262	0/0:16,0:14:32.46:0,32,391	0/0:12,0:12:24.05:0,24,273	1/1:22,0:20:41.23:185,41,0	1/1:21,0:18:46.86:254,47,0	1/1:26,0:22:40.46:175,40,0	1/1:12,0:9:21.48:106,21,0
chr10	53883805	.	ACTCTCTCT	A	2374.94	PASS	AB=0.767;AC=7;AF=0.125;AN=56;BaseQRankSum=6.985;DP=667;FS=21.544;HRun=0;HaplotypeScore=162.3775;InbreedingCoeff=0.6765;MQ=62.74;MQ0=18;MQRankSum=-7.604;QD=25.81;ReadPosRankSum=0.725;VQSLOD=1.9463;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:43.03:0,43,1398	0/0:6,0:7:12.04:0,12,426	0/0:35,0:19:6.02:0,6,196	0/0:52,0:23:9.26:0,9,310	0/1:16,1:23:80.59:81,0,140	0/0:23,0:22:25.02:0,25,801	0/0:17,0:22:24.55:0,25,845	0/0:25,0:25:24.97:0,25,784	1/1:10,11:22:33.11:814,33,0	0/0:23,0:21:33.09:0,33,1050	0/0:16,0:18:15.45:0,15,556	0/0:19,0:19:39.13:0,39,1403	0/0:26,0:25:51.18:0,51,1938	1/1:5,19:25:42.62:1041,43,0	0/0:17,0:20:33.11:0,33,1166	0/0:18,0:18:42.13:0,42,1542	0/0:14,0:16:12.51:0,13,364	0/0:23,0:29:36.11:0,36,1198	0/0:26,0:29:32.32:0,32,959	0/0:13,0:20:0.68:0,1,101	0/0:9,0:18:9.03:0,9,279	0/0:16,0:16:36.12:0,36,1211	0/0:15,0:16:5.18:0,5,538	0/0:23,0:27:50.98:0,51,1759	1/1:12,9:22:24.08:586,24,0	0/0:21,0:24:30.10:0,30,1144	0/0:21,0:29:20.74:0,21,679	0/0:19,0:22:24.08:0,24,777
chr10	53884227	.	ATTT	A	5936.73	PASS	AB=0.800;AC=28;AF=0.500;AN=56;BaseQRankSum=4.151;DP=618;FS=9.059;HRun=14;HaplotypeScore=104.2767;InbreedingCoeff=0.8354;MQ=70.57;MQ0=0;MQRankSum=1.769;QD=19.34;ReadPosRankSum=6.278;VQSLOD=3.1807;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:54:99:0,132,1992	0/0:8,0:9:27.08:0,27,438	0/0:18,0:14:5.64:0,6,155	0/0:14,0:11:22.93:0,23,238	1/1:6,16:23:22.47:464,22,0	1/1:2,12:15:31.63:383,32,0	1/1:5,21:29:4.76:413,5,0	0/1:27,0:27:99:138,0,116	1/1:4,9:13:26.72:292,27,0	1/1:5,14:21:21.34:403,21,0	1/1:6,13:19:29.47:257,29,0	0/0:28,0:29:69.05:0,69,963	0/0:19,0:25:58.32:0,58,703	1/1:2,16:20:16.21:395,16,0	0/0:26,0:28:69.08:0,69,973	0/0:15,0:18:48.10:0,48,720	0/0:25,0:26:35.45:0,35,380	0/0:29,0:29:47.84:0,48,520	1/1:5,16:23:46.49:504,46,0	1/1:0,11:10:26.86:263,27,0	1/1:3,26:29:49.11:624,49,0	0/0:14,0:18:48.97:0,49,731	0/0:13,0:12:27.06:0,27,382	0/0:24,0:29:81.15:0,81,1244	1/1:2,12:13:23.96:262,24,0	1/1:1,20:22:59.87:651,60,0	1/1:3,16:22:50.92:544,51,0	0/1:6,10:18:5.57:344,0,6
chr10	53884239	.	T	TTGTTG	1646.57	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=0.842;DP=645;FS=8.326;HRun=0;HaplotypeScore=160.3114;InbreedingCoeff=0.8562;MQ=69.41;MQ0=0;MQRankSum=-5.256;QD=18.93;ReadPosRankSum=0.087;VQSLOD=2.7430;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:58:99:0,151,2340	0/0:10,0:10:27.08:0,27,459	0/0:15,0:11:25.84:0,26,342	0/0:18,0:14:27.59:0,28,248	0/0:20,0:20:48.04:0,48,670	0/0:16,0:16:45.13:0,45,604	0/0:28,0:28:33.34:0,33,667	1/1:27,0:27:7.80:411,8,0	0/0:20,0:20:28.97:0,29,630	0/0:19,0:19:51.14:0,51,681	0/0:17,0:17:16.62:0,17,321	0/0:26,0:26:72.07:0,72,1089	0/0:27,0:27:64.72:0,65,876	0/0:23,0:23:57.13:0,57,774	0/0:30,0:30:75.01:0,75,1165	0/0:21,0:21:49.40:0,49,867	1/1:8,19:29:12.17:730,12,0	1/1:8,18:31:0.74:624,1,0	0/0:23,0:23:63.86:0,64,858	0/0:15,0:13:35.52:0,36,467	0/0:32,0:31:72.19:0,72,973	0/0:19,0:19:51.15:0,51,867	0/0:12,0:11:20.43:0,20,366	0/0:28,0:28:78.23:0,78,1371	0/0:12,0:11:23.81:0,24,282	0/0:25,0:25:70.91:0,71,945	0/0:25,0:25:69.21:0,69,950	0/0:18,0:18:51.14:0,51,713
chr10	53884242	.	G	GTAA	1809.83	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=-0.342;DP=641;FS=0.619;HRun=0;HaplotypeScore=134.3074;InbreedingCoeff=0.6921;MQ=72.43;MQ0=0;MQRankSum=-6.435;QD=28.73;ReadPosRankSum=-3.837;VQSLOD=3.1717;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,147,2423	0/0:13,0:12:30.06:0,30,489	0/0:18,0:13:28.16:0,28,428	0/0:19,0:17:33.50:0,33,353	0/0:21,0:21:54.16:0,54,833	0/0:17,0:17:48.16:0,48,776	0/0:21,0:21:54.14:0,54,835	1/1:11,19:35:99:1904,99,0	0/0:19,0:19:57.19:0,57,906	0/0:20,0:20:51.17:0,51,836	0/0:18,0:18:33.94:0,34,461	0/0:28,0:28:63.20:0,63,1040	0/0:24,0:24:50.96:0,51,786	0/0:23,0:23:57.16:0,57,868	0/0:26,0:26:66.20:0,66,1092	0/0:22,0:22:54.18:0,54,931	0/1:28,0:28:2.71:3,0,145	0/0:21,0:21:7.22:0,7,93	0/0:22,0:22:63.20:0,63,994	0/0:15,0:13:33.07:0,33,490	0/0:32,0:31:72.23:0,72,1163	0/0:19,0:19:48.16:0,48,837	0/0:9,0:9:21.07:0,21,360	0/0:26,0:26:78.26:0,78,1311	0/0:13,0:12:24.08:0,24,357	0/0:28,0:28:75.23:0,75,1172	0/0:27,0:27:78.24:0,78,1236	0/0:21,0:21:48.16:0,48,784
chr10	53884563	.	G	GCACA	1302.94	PASS	AB=0.862;AC=23;AF=0.460;AN=50;BaseQRankSum=-0.852;DP=593;FS=5.336;HRun=0;HaplotypeScore=113.3016;InbreedingCoeff=0.4542;MQ=60.76;MQ0=18;MQRankSum=-0.245;QD=4.59;ReadPosRankSum=-3.833;VQSLOD=0.4325;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:37:33.06:0,33,412	0/0:6,0:6:6.02:0,6,94	./.	./.	1/1:16,0:15:14.78:127,15,0	0/0:7,2:16:2.95:0,3,33	0/1:16,8:30:15.67:150,0,16	1/1:20,0:15:5.20:29,5,0	1/1:19,0:17:3.46:25,3,0	1/1:12,2:13:11.97:221,12,0	1/1:9,0:9:3.01:71,3,0	0/0:24,0:24:24.07:0,24,346	0/0:14,0:17:16.23:0,16,151	0/1:19,0:19:0:0,0,0	0/0:16,0:20:30.09:0,30,430	0/0:17,0:21:27.08:0,27,384	0/0:22,0:22:8.04:0,8,61	1/1:16,0:16:2.12:7,2,0	0/1:17,0:13:35.73:36,0,126	1/1:12,5:18:6.02:142,6,0	0/1:17,21:45:12.86:149,0,13	0/0:20,0:23:9.07:0,9,275	0/0:8,0:8:12.03:0,12,169	0/0:29,0:35:36.08:0,36,461	1/1:21,0:20:14.69:143,15,0	0/1:22,0:20:22.92:207,0,23	1/1:6,5:14:11.51:166,12,0	./.
chr10	53884593	.	ACACACACAC	A	82.56	PASS	AB=0.875;AC=2;AF=0.038;AN=52;BaseQRankSum=2.692;DP=505;FS=5.049;HRun=0;HaplotypeScore=125.7138;InbreedingCoeff=0.1640;MQ=41.91;MQ0=55;MQRankSum=-3.193;QD=2.66;ReadPosRankSum=-0.046;VQSLOD=2.3251;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:48.64:0,49,1831	0/0:7,0:6:15.05:0,15,484	./.	./.	0/0:17,0:15:18.04:0,18,505	0/0:12,0:12:3.48:0,3,93	0/0:30,0:29:27.02:0,27,627	0/0:8,0:6:11.93:0,12,157	0/0:18,0:14:13.86:0,14,341	0/0:14,0:12:33.11:0,33,913	0/0:12,0:8:9.50:0,10,277	0/0:20,0:16:30.10:0,30,1195	0/0:17,0:16:43.70:0,44,1128	0/0:15,0:14:6.48:0,6,99	0/0:13,0:12:30.10:0,30,1368	0/0:17,0:16:30.10:0,30,1285	0/1:16,0:14:2.05:66,0,2	0/1:10,5:12:17.87:104,0,18	0/0:12,0:11:33.11:0,33,915	0/0:14,0:11:12.04:0,12,425	0/0:51,0:49:34.60:0,35,736	0/0:21,0:21:30.10:0,30,1266	0/0:10,0:9:12.04:0,12,547	0/0:28,0:28:46.08:0,46,1557	0/0:17,0:13:22:0,22,487	0/0:20,0:19:57.12:0,57,1515	0/0:21,0:20:28.45:0,28,883	0/0:2,0:2:3.01:0,3,40
chr10	53884595	.	ACACACAC	A	287.21	PASS	AB=1.000;AC=5;AF=0.096;AN=52;BaseQRankSum=1.544;DP=493;FS=3.576;HRun=0;HaplotypeScore=112.1469;InbreedingCoeff=0.5562;MQ=41.77;MQ0=57;MQRankSum=-3.362;QD=8.21;ReadPosRankSum=-0.599;VQSLOD=2.1482;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:48.60:0,49,1410	0/0:7,0:6:15.05:0,15,400	./.	./.	0/0:17,0:15:18.04:0,18,458	0/0:12,0:12:3.01:0,3,67	0/0:29,0:28:21.05:0,21,477	0/1:9,0:6:8:8,0,67	0/0:18,0:14:13:0,13,291	0/0:15,0:13:36.09:0,36,746	0/0:12,0:8:9.50:0,10,256	0/0:20,0:16:30.09:0,30,984	0/0:17,0:16:43:0,43,877	0/0:14,0:13:3.48:0,3,37	0/0:13,0:12:30.10:0,30,1113	0/0:17,0:16:30.10:0,30,1053	1/1:4,10:12:9.03:202,9,0	1/1:11,1:9:11.56:190,12,0	0/0:14,0:12:36.09:0,36,816	0/0:14,0:11:11.99:0,12,330	0/0:51,0:49:30.17:0,30,516	0/0:21,0:21:30.10:0,30,1032	0/0:9,0:8:12.04:0,12,443	0/0:27,0:27:43.06:0,43,1208	0/0:16,0:12:18.65:0,19,338	0/0:19,0:18:54.14:0,54,1294	0/0:19,0:18:28.03:0,28,694	0/0:2,0:2:3.01:0,3,41
chr10	53885039	.	AC	A	681.26	PASS	AB=1.000;AC=7;AF=0.152;AN=46;BaseQRankSum=5.248;DP=204;FS=2.637;HRun=1;HaplotypeScore=28.9452;InbreedingCoeff=0.3290;MQ=42.62;MQ0=49;MQRankSum=-3.961;QD=16.22;ReadPosRankSum=1.473;VQSLOD=3.7251;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:8:3.01:0,3,41	0/0:1,0:1:3.01:0,3,41	./.	./.	0/0:6,0:4:3.01:0,3,41	0/0:5,0:4:6.02:0,6,81	./.	1/1:19,0:18:48.02:622,48,0	0/0:8,0:8:15.05:0,15,210	0/0:8,0:6:15.05:0,15,202	./.	0/0:4,0:3:6.02:0,6,76	0/0:4,0:3:9.03:0,9,122	0/0:8,0:7:6.02:0,6,81	0/1:9,0:9:18.05:18,0,35	0/0:3,0:1:3.01:0,3,41	1/1:1,5:3:3.01:41,3,0	1/1:2,6:4:9.03:122,9,0	0/0:4,0:2:6.02:0,6,81	0/0:6,0:5:12.04:0,12,162	0/0:10,0:9:6.02:0,6,81	0/0:3,0:3:3.01:0,3,41	./.	0/0:8,0:6:5.71:0,6,81	0/0:7,0:7:3.01:0,3,41	0/0:3,0:2:2.97:0,3,41	0/0:7,0:6:6.01:0,6,75	0/0:5,0:5:12.04:0,12,162
chr10	53885040	.	C	CA	736.92	PASS	AB=1.000;AC=7;AF=0.152;AN=46;BaseQRankSum=4.998;DP=196;FS=2.635;HRun=1;HaplotypeScore=29.1982;InbreedingCoeff=0.3299;MQ=44.24;MQ0=48;MQRankSum=-4.055;QD=18.42;ReadPosRankSum=1.047;VQSLOD=3.8791;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:8:3.01:0,3,41	0/0:1,0:1:3.01:0,3,41	./.	./.	0/0:7,0:5:3.01:0,3,41	0/0:3,0:2:6.02:0,6,82	./.	1/1:1,17:17:51.13:677,51,0	0/0:8,0:8:15.05:0,15,200	0/0:8,0:6:15.05:0,15,203	./.	0/0:5,0:4:6.02:0,6,77	0/0:6,0:5:9.03:0,9,122	0/0:6,0:6:6.02:0,6,82	0/1:8,0:9:18.09:18,0,35	0/0:5,0:3:3.01:0,3,41	1/1:5,1:3:3.01:41,3,0	1/1:6,1:3:9.03:122,9,0	0/0:4,0:2:6.02:0,6,82	0/0:5,0:5:12.04:0,12,163	0/0:9,0:8:5.97:0,6,81	0/0:3,0:3:3.01:0,3,41	./.	0/0:8,0:6:6.02:0,6,82	0/0:5,0:5:3.01:0,3,41	0/0:2,0:1:3.01:0,3,41	0/0:6,0:6:6.02:0,6,75	0/0:4,0:4:12.04:0,12,163
chr10	53885329	.	TAG	T	459.74	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.758;DP=590;FS=2.278;HRun=0;HaplotypeScore=74.2175;InbreedingCoeff=0.9902;MQ=79.26;MQ0=0;MQRankSum=-6.053;QD=19.99;ReadPosRankSum=0.050;VQSLOD=3.3920;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,108,1940	0/0:7,0:7:18.06:0,18,320	0/0:18,0:18:54.11:0,54,900	0/0:14,0:14:39.13:0,39,700	0/0:20,0:19:42.14:0,42,769	0/0:16,0:16:48.16:0,48,873	0/0:21,0:21:63.22:0,63,1149	0/0:33,0:33:84.29:0,84,1524	0/0:17,0:17:45.14:0,45,779	0/0:30,0:28:84.29:0,84,1515	0/0:18,0:18:38.79:0,39,690	0/0:18,0:18:54.17:0,54,960	0/0:29,0:29:84.29:0,84,1533	0/0:30,0:30:90.31:0,90,1617	0/0:31,0:31:90.31:0,90,1644	0/0:31,0:31:90.31:0,90,1644	1/1:2,11:12:24.08:328,24,0	1/1:5,5:10:18.06:250,18,0	0/0:15,0:15:45.15:0,45,820	0/0:19,0:18:45.15:0,45,806	0/0:10,0:10:30.10:0,30,537	0/0:23,0:23:63.20:0,63,1123	0/0:18,0:18:39.13:0,39,714	0/0:18,0:18:54.19:0,54,989	0/0:18,0:18:39.13:0,39,697	0/0:20,0:20:60.19:0,60,1069	0/0:40,0:40:99:0,111,2027	0/0:16,0:16:42.14:0,42,767
chr10	53885336	.	CAGTAGTTCT	C	1117.40	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.196;DP=588;FS=5.460;HRun=0;HaplotypeScore=154.7191;InbreedingCoeff=0.9892;MQ=82.10;MQ0=0;MQRankSum=-5.427;QD=69.84;ReadPosRankSum=0.874;VQSLOD=3.0830;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,114,5646	0/0:8,0:8:24.08:0,24,1089	0/0:20,0:20:53.36:0,53,2193	0/0:16,0:16:48.16:0,48,2144	0/0:20,0:19:45.15:0,45,2053	0/0:17,0:17:51.15:0,51,2228	0/0:22,0:22:66.19:0,66,2698	0/0:31,0:31:87.29:0,87,4014	0/0:12,0:12:36.12:0,36,1654	0/0:32,0:30:90.30:0,90,4166	0/0:17,0:17:36.12:0,36,1793	0/0:19,0:19:57.20:0,57,2845	0/0:30,0:30:90.29:0,90,4148	0/0:32,0:32:96.32:0,96,4423	0/0:32,0:32:96.29:0,96,4320	0/0:32,0:32:96.30:0,96,4393	1/1:2,9:10:24.08:754,24,0	1/1:0,5:5:15.05:482,15,0	0/0:16,0:16:48.16:0,48,2243	0/0:18,0:17:48.16:0,48,2211	0/0:10,0:10:30.10:0,30,1517	0/0:20,0:20:60.18:0,60,2651	0/0:17,0:17:36.11:0,36,1525	0/0:18,0:18:54.17:0,54,2257	0/0:17,0:17:39.13:0,39,1834	0/0:23,0:23:69.24:0,69,3422	0/0:37,0:37:99:0,111,5330	0/0:18,0:18:48.16:0,48,2251
chr10	53885830	.	G	GAA	4170.35	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-2.071;DP=707;FS=13.078;HRun=7;HaplotypeScore=85.0756;InbreedingCoeff=0.9961;MQ=70.11;MQ0=0;MQRankSum=-2.741;QD=37.91;ReadPosRankSum=-0.867;VQSLOD=2.1014;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:81.23:0,81,943	0/0:18,0:18:54.16:0,54,629	0/0:6,0:6:17.84:0,18,181	0/0:14,0:12:23.75:0,24,234	0/0:19,0:19:51.10:0,51,569	0/0:19,0:19:42.09:0,42,478	0/0:26,0:26:66.18:0,66,769	1/1:4,35:40:99:1561,102,0	0/0:19,0:19:54.14:0,54,618	0/0:38,0:38:87.23:0,87,1006	0/0:12,0:12:36.11:0,36,419	0/0:29,0:29:84.23:0,84,968	0/0:29,0:29:69.19:0,69,804	0/0:31,0:31:75.11:0,75,855	0/0:24,0:24:63.13:0,63,702	0/0:33,0:33:96.26:0,96,1097	1/1:3,36:39:87.30:1428,87,0	1/1:1,30:31:72.25:1182,72,0	0/0:21,0:21:57.12:0,57,634	0/0:20,0:20:48.13:0,48,559	0/0:33,0:33:75.21:0,75,874	0/0:23,0:23:65.86:0,66,744	0/0:28,0:28:78.21:0,78,897	0/0:35,0:35:99:0,99,1126	0/0:25,0:25:72.20:0,72,829	0/0:21,0:21:54.16:0,54,629	0/0:25,0:25:66.15:0,66,745	0/0:13,0:13:39.12:0,39,454
chr10	53887958	.	A	AC	3525.68	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=2.197;DP=714;FS=6.740;HRun=0;HaplotypeScore=77.9503;InbreedingCoeff=1.0000;MQ=87.23;MQ0=0;MQRankSum=-1.616;QD=43.00;ReadPosRankSum=-2.658;VQSLOD=2.9203;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:69.21:0,69,946	0/0:14,0:14:42.14:0,42,586	0/0:35,0:33:95.93:0,96,1218	0/0:24,0:23:56.54:0,57,713	0/0:37,0:37:99:0,111,1552	0/0:22,0:22:66.22:0,66,920	0/0:32,0:32:96.31:0,96,1325	1/1:0,29:29:87.30:1384,87,0	0/0:25,0:25:75.22:0,75,1013	0/0:29,0:29:84.28:0,84,1175	0/0:21,0:21:63.21:0,63,881	0/0:23,0:23:69.23:0,69,964	0/0:25,0:25:75.22:0,75,1027	0/0:28,0:28:84.28:0,84,1174	0/0:25,0:25:75.25:0,75,1048	0/0:23,0:23:66.21:0,66,906	1/1:1,34:35:87.30:1390,87,0	1/1:0,17:18:48.16:752,48,0	0/0:14,0:14:42.14:0,42,580	0/0:21,0:21:63.21:0,63,875	0/0:19,0:19:54.18:0,54,755	0/0:22,0:22:66.20:0,66,902	0/0:28,0:28:78.26:0,78,1089	0/0:18,0:18:51.17:0,51,713	0/0:31,0:31:93.29:0,93,1271	0/0:29,0:29:84.26:0,84,1143	0/0:38,0:35:99:0,111,1548	0/0:24,0:24:69.23:0,69,964
chr10	53889599	.	G	GA	1230.17	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=-8.189;DP=684;FS=1.752;HRun=0;HaplotypeScore=103.8602;InbreedingCoeff=0.4098;MQ=95.06;MQ0=0;MQRankSum=-2.336;QD=7.69;ReadPosRankSum=-4.744;VQSLOD=2.8044;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:72.17:0,72,949	0/0:7,0:7:21.07:0,21,292	0/0:34,0:34:75.67:0,76,1039	0/0:29,0:29:74.63:0,75,793	0/0:34,0:34:22.66:0,23,138	0/0:22,0:22:20.07:0,20,98	0/1:21,0:21:0.44:0,0,68	0/1:42,0:42:22.36:92,0,22	0/0:24,0:24:43.01:0,43,130	0/0:33,0:33:35.91:0,36,129	0/0:38,0:38:57.99:0,58,266	0/0:22,0:22:63.19:0,63,857	0/0:16,0:16:48.14:0,48,636	0/0:20,0:20:42.81:0,43,130	0/0:24,0:24:72.22:0,72,972	0/0:19,0:19:57.15:0,57,743	1/1:0,19:20:48.09:675,48,0	1/1:0,15:15:39.13:582,39,0	0/1:23,0:23:9.94:10,0,68	0/0:38,0:38:28.73:0,29,191	0/1:29,0:29:8.49:8,0,89	0/0:27,0:27:81.27:0,81,1117	0/0:25,0:25:72.21:0,72,964	0/0:13,0:13:39.10:0,39,492	0/0:17,0:17:6.80:0,7,51	0/0:33,0:33:19.68:0,20,75	0/0:23,0:22:52.44:0,52,189	0/1:10,0:10:1.37:1,0,35
chr10	53890896	.	AAT	A	8738.16	PASS	AB=0.857;AC=33;AF=0.611;AN=54;BaseQRankSum=9.241;DP=391;FS=1.067;HRun=0;HaplotypeScore=68.7808;InbreedingCoeff=0.8272;MQ=67.93;MQ0=0;MQRankSum=-4.165;QD=29.62;ReadPosRankSum=-0.909;VQSLOD=6.0339;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:54.18:0,54,919	0/0:9,0:9:24.08:0,24,412	0/0:8,0:6:3.01:0,3,41	0/0:19,0:11:2.81:0,3,81	1/1:6,16:21:45.13:573,45,0	1/1:6,16:22:51.11:635,51,0	1/1:1,12:13:36.10:456,36,0	1/1:7,24:31:84.27:1100,84,0	1/1:2,6:7:18.06:235,18,0	1/1:3,16:19:54.16:685,54,0	1/1:4,12:16:30.10:392,30,0	0/0:8,0:8:21.07:0,21,350	0/0:7,0:7:18.06:0,18,306	1/1:2,13:15:45.13:576,45,0	0/0:11,0:11:27.09:0,27,458	0/1:10,2:12:43.99:44,0,427	1/1:4,7:11:18.06:236,18,0	1/1:3,6:9:21.07:270,21,0	1/1:5,13:17:48.16:625,48,0	1/1:6,11:17:24.08:313,24,0	./.	0/0:3,0:3:6.02:0,6,87	0/0:5,0:5:9.03:0,9,154	0/0:4,0:4:9.03:0,9,154	1/1:5,15:19:51.12:649,51,0	1/1:3,14:17:48.15:614,48,0	1/1:8,16:24:51.17:669,51,0	1/1:9,12:21:51.16:667,51,0
chr10	53890921	.	C	CT	7721.92	PASS	AB=0.867;AC=35;AF=0.625;AN=56;BaseQRankSum=3.646;DP=412;FS=7.246;HRun=8;HaplotypeScore=69.7801;InbreedingCoeff=0.9004;MQ=68.79;MQ0=0;MQRankSum=-7.922;QD=26.18;ReadPosRankSum=0.186;VQSLOD=5.4737;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:74.56:0,75,685	0/0:7,0:7:18.01:0,18,165	0/0:14,0:13:23.06:0,23,258	0/0:10,0:10:14.95:0,15,134	1/1:2,19:20:48.14:552,48,0	1/1:3,13:16:45.13:518,45,0	1/1:4,11:15:33.10:378,33,0	1/1:10,27:37:87.21:980,87,0	1/1:0,10:10:30.09:346,30,0	1/1:8,13:21:48.61:546,49,0	1/1:3,11:14:30.05:331,30,0	0/0:12,0:12:36.02:0,36,330	0/0:9,0:9:24.01:0,24,220	1/1:5,7:12:23.28:248,23,0	0/0:15,0:15:45.01:0,45,407	0/1:11,2:13:36.22:36,0,214	1/1:1,12:13:30.09:346,30,0	1/1:3,9:12:30.05:331,30,0	1/1:5,15:20:48.14:552,48,0	1/1:2,15:17:39.12:450,39,0	1/1:0,4:4:9.03:104,9,0	0/0:3,0:3:9:0,9,82	0/0:6,0:6:18.01:0,18,165	0/0:12,0:12:32.97:0,33,294	1/1:5,15:20:45.13:519,45,0	1/1:3,16:19:51.08:559,51,0	1/1:3,18:21:54.15:614,54,0	1/1:1,9:9:27.08:311,27,0
chr10	53891026	.	C	CAGAG	19629.86	PASS	AB=0.950;AC=35;AF=0.625;AN=56;BaseQRankSum=-2.357;DP=511;FS=35.466;HRun=0;HaplotypeScore=85.6865;InbreedingCoeff=0.9179;MQ=66.16;MQ0=4;MQRankSum=-9.523;QD=58.77;ReadPosRankSum=2.579;VQSLOD=3.7152;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:75.26:0,75,1398	0/0:5,0:5:12.04:0,12,224	0/0:18,0:18:48.12:0,48,837	0/0:27,0:27:75.25:0,75,1291	1/1:5,20:25:51.18:1358,51,0	1/1:3,23:24:60.21:1597,60,0	1/1:2,13:18:45.15:1184,45,0	1/1:11,16:27:69.24:1785,69,0	1/1:3,11:13:27.09:718,27,0	1/1:2,16:18:54.19:1404,54,0	1/1:1,7:9:21.07:554,21,0	0/0:23,0:23:69.24:0,69,1287	0/0:14,0:14:33.11:0,33,615	1/1:2,18:20:45.15:1197,45,0	0/0:21,0:21:48.14:0,48,836	0/1:18,1:19:22.87:23,0,893	1/1:3,13:17:39.13:1039,39,0	1/1:0,17:17:45.15:1200,45,0	1/1:3,11:15:36.11:906,36,0	1/1:7,11:19:36.12:958,36,0	1/1:4,20:26:48.16:1280,48,0	0/0:7,0:7:21.07:0,21,392	0/0:10,0:10:24.06:0,24,412	0/0:25,0:24:60.19:0,60,1089	1/1:3,12:16:39.13:1038,39,0	1/1:1,12:13:39.13:1006,39,0	1/1:4,15:22:57.20:1503,57,0	1/1:0,11:11:33.11:878,33,0
chr10	53891142	.	A	ATCTCTC	791.33	PASS	AB=0.970;AC=13;AF=0.283;AN=46;BaseQRankSum=-0.493;DP=579;FS=1.806;HRun=0;HaplotypeScore=143.9434;InbreedingCoeff=0.0110;MQ=69.83;MQ0=12;MQRankSum=-0.035;QD=3.30;ReadPosRankSum=-1.465;VQSLOD=2.6600;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:25:2.75:0,3,300	0/0:11,0:11:9.03:0,9,152	./.	./.	0/0:22,0:21:10.31:0,10,85	0/0:30,0:28:18.93:0,19,273	0/0:21,0:20:5.62:0,6,110	0/1:26,0:25:0:0,0,0	1/1:19,1:20:6.82:174,7,0	0/0:20,0:19:2:0,2,42	0/0:9,0:9:3.01:0,3,50	0/1:20,0:19:7.65:8,0,68	0/1:18,0:23:48.55:152,0,49	./.	0/0:15,0:16:8.63:0,9,151	0/1:15,0:16:49.70:50,0,408	0/0:16,0:15:17.26:0,17,198	0/0:22,0:21:24.41:0,24,291	1/1:26,0:24:5.96:50,6,0	./.	0/1:18,0:18:16.28:27,0,16	0/0:11,0:10:5.97:0,6,69	0/0:11,0:11:0.36:0,0,1	0/1:20,0:19:0.03:0,0,116	0/1:20,0:19:21.06:71,0,21	0/1:21,0:20:31.11:31,0,92	0/1:27,1:30:5.92:357,0,6	./.
chr10	53891185	.	T	TCACACACA	5380.14	PASS	AB=1.000;AC=33;AF=0.611;AN=54;BaseQRankSum=0.854;DP=500;FS=16.924;HRun=0;HaplotypeScore=136.4221;InbreedingCoeff=0.6361;MQ=48.36;MQ0=13;MQRankSum=-3.603;QD=15.55;ReadPosRankSum=-2.361;VQSLOD=1.9781;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:35,0:34:20.37:20,0,494	0/0:10,0:10:14.26:0,14,310	0/0:7,0:5:12.02:0,12,217	0/0:10,0:9:20.91:0,21,420	1/1:23,0:19:18.04:417,18,0	1/1:24,0:23:5.78:122,6,0	1/1:20,0:19:20.09:371,20,0	1/1:27,0:25:31.61:599,32,0	1/1:8,5:17:1.65:113,2,0	1/1:21,1:20:38.77:1129,39,0	./.	0/0:25,0:24:51.15:0,51,1170	0/0:21,0:22:5.47:0,5,495	1/1:22,0:21:14.79:385,15,0	0/0:17,0:17:33.98:0,34,744	0/0:18,0:18:8.58:0,9,636	1/1:9,4:17:6.02:148,6,0	1/1:12,4:20:12.51:378,13,0	1/1:18,1:17:27.04:583,27,0	1/1:14,0:14:6.02:124,6,0	0/1:10,0:10:0:0,0,0	0/0:11,0:10:12.04:0,12,296	0/1:10,0:10:11.91:12,0,70	0/0:28,0:26:41.67:0,42,878	1/1:4,0:8:3.01:72,3,0	1/1:20,0:19:27.09:763,27,0	1/1:16,7:30:2.78:25,3,0	1/1:5,0:3:6.02:120,6,0
chr10	53892528	.	GAC	G	4003.28	PASS	AB=0.871;AC=33;AF=0.589;AN=56;BaseQRankSum=10.228;DP=581;FS=1.026;HRun=0;HaplotypeScore=75.4637;InbreedingCoeff=0.3083;MQ=64.90;MQ0=10;MQRankSum=1.468;QD=9.08;ReadPosRankSum=1.449;VQSLOD=3.4233;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:21.04:0,21,295	0/1:10,1:11:18.59:19,0,168	0/0:20,1:13:3.01:0,3,44	0/0:28,0:15:3.01:0,3,44	1/1:12,18:31:38.59:417,39,0	0/1:8,16:25:9.74:314,0,10	1/1:4,11:15:18.05:202,18,0	0/0:25,0:28:32.64:0,33,356	1/1:5,9:15:23.90:249,24,0	0/1:11,9:22:13.33:241,0,13	1/1:11,6:17:8.98:87,9,0	0/1:13,1:14:3.58:4,0,355	0/1:14,3:17:64.79:65,0,375	1/1:10,10:21:32.55:297,33,0	0/1:19,1:20:0.54:1,0,400	0/1:20,2:22:25.13:25,0,495	0/1:19,2:21:3.56:4,0,381	0/1:19,0:20:2.94:3,0,262	0/1:11,0:12:3.13:88,0,3	1/1:11,16:28:24.70:477,25,0	1/1:8,12:21:28.73:289,29,0	0/0:22,1:23:14.52:0,15,650	0/0:17,0:17:27.09:0,27,411	0/1:22,0:22:0.29:0,0,401	1/1:6,8:15:23.90:249,24,0	1/1:11,8:20:23.90:248,24,0	1/1:18,8:28:26.74:263,27,0	1/1:8,13:22:44.55:462,45,0
chr10	53893535	.	T	TA	12127.87	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-15.238;DP=682;FS=36.784;HRun=8;HaplotypeScore=59.7919;InbreedingCoeff=0.9877;MQ=76.07;MQ0=0;MQRankSum=-1.758;QD=28.27;ReadPosRankSum=1.200;VQSLOD=2.7451;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:89.99:0,90,807	0/0:13,0:13:27:0,27,247	0/0:13,0:12:26.75:0,27,219	0/0:20,0:20:7.65:0,8,223	1/1:3,32:35:90.18:1009,90,0	1/1:4,22:26:66.14:746,66,0	1/1:2,13:16:20.49:460,20,0	1/1:6,27:33:81.24:935,81,0	1/1:3,22:25:57.17:658,57,0	1/1:2,32:34:96.27:1099,96,0	1/1:0,21:21:57.09:640,57,0	0/0:24,0:24:57.02:0,57,521	0/0:22,0:22:63.01:0,63,572	1/1:0,23:23:54.16:623,54,0	0/0:35,0:35:96:0,96,864	0/0:17,0:17:45.02:0,45,412	1/1:3,27:30:69.20:795,69,0	1/1:6,8:14:24.07:277,24,0	1/1:2,18:21:56.96:605,57,0	1/1:4,17:21:48.14:551,48,0	1/1:2,19:21:54.16:623,54,0	0/0:35,0:35:96.02:0,96,868	0/0:19,0:19:47.98:0,48,427	0/0:21,0:21:30.35:0,30,431	1/1:7,25:32:72.21:824,72,0	1/1:4,26:30:78.22:891,78,0	1/1:4,23:28:72.14:803,72,0	1/1:1,18:19:51.15:589,51,0
chr10	53895518	.	CGGGG	C	10174.97	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-9.897;DP=537;FS=5.615;HRun=11;HaplotypeScore=105.3289;InbreedingCoeff=0.9828;MQ=77.36;MQ0=0;MQRankSum=-5.355;QD=29.75;ReadPosRankSum=3.500;VQSLOD=3.5617;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:34:69.07:0,69,821	0/0:3,0:7:15.03:0,15,165	0/0:13,0:14:26.43:0,26,311	0/0:14,0:17:20.85:0,21,397	1/1:6,12:18:26.92:362,27,0	1/1:2,20:22:42.07:618,42,0	1/1:4,21:25:51.14:797,51,0	1/1:2,24:26:60.02:862,60,0	1/1:5,19:25:24.73:592,25,0	1/1:8,17:25:48.11:725,48,0	1/1:5,12:17:29.95:409,30,0	0/0:13,0:21:48.12:0,48,578	0/0:9,0:21:51:0,51,591	1/1:2,15:17:42.14:656,42,0	0/0:11,0:19:27:0,27,323	0/0:5,0:17:38.96:0,39,505	1/1:1,8:9:24.08:375,24,0	1/1:3,20:23:48.10:722,48,0	1/1:5,8:13:24.06:375,24,0	1/1:2,13:15:36.59:562,37,0	1/1:3,18:21:36.11:563,36,0	0/0:8,0:8:12.03:0,12,149	0/0:7,0:12:9.02:0,9,102	0/0:1,0:22:60.19:0,60,752	1/1:4,17:21:39.05:580,39,0	1/1:5,15:20:48.14:740,48,0	1/1:5,23:28:45.12:704,45,0	1/1:0,17:17:36.05:534,36,0
chr10	53895526	.	GGGGA	G	5246.42	PASS	AB=0.991;AC=28;AF=0.500;AN=56;BaseQRankSum=7.926;DP=491;FS=3.163;HRun=0;HaplotypeScore=114.1591;InbreedingCoeff=0.5720;MQ=75.15;MQ0=0;MQRankSum=-3.783;QD=16.98;ReadPosRankSum=8.047;VQSLOD=3.8920;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:88.95:0,89,1098	0/0:9,0:9:21.07:0,21,299	0/0:13,0:11:26.88:0,27,313	0/0:16,0:15:18.04:0,18,385	1/1:12,2:14:24.17:221,24,0	1/1:20,0:20:38.29:337,38,0	1/1:21,0:21:50.97:470,51,0	0/1:28,0:28:99:382,0,119	1/1:20,1:21:21.77:319,22,0	1/1:20,0:20:26.72:376,27,0	1/1:13,1:14:9.74:254,10,0	0/0:19,0:19:48.06:0,48,634	0/0:22,0:22:57.11:0,57,721	1/1:16,0:16:42.01:415,42,0	0/0:14,0:14:33:0,33,398	0/0:17,0:17:42.13:0,42,555	1/1:9,0:9:4.03:186,4,0	1/1:20,0:20:43.70:370,44,0	0/1:11,0:11:51.68:147,0,52	0/1:17,1:18:36.92:267,0,37	0/1:20,0:20:7.99:242,0,8	0/0:6,0:6:18.02:0,18,210	0/0:11,0:11:20.99:0,21,251	0/0:23,0:23:66.19:0,66,867	0/1:20,0:20:8.96:291,0,9	1/1:15,1:16:47.54:422,48,0	0/1:24,0:24:6.01:307,0,6	1/1:17,0:17:31.64:241,32,0
chr10	53896609	.	G	GT	12904.68	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-15.953;DP=695;FS=0.000;HRun=7;HaplotypeScore=63.8619;InbreedingCoeff=0.9924;MQ=70.23;MQ0=0;MQRankSum=-0.381;QD=30.95;ReadPosRankSum=-0.416;VQSLOD=4.7042;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:93.14:0,93,897	0/0:14,0:14:39.05:0,39,371	0/0:8,0:8:11.99:0,12,106	0/0:13,0:13:13.64:0,14,107	1/1:3,28:31:72.21:858,72,0	1/1:1,18:18:48.15:580,48,0	1/1:3,21:24:57.17:689,57,0	1/1:5,31:36:93.25:1096,93,0	1/1:3,20:23:57.17:688,57,0	1/1:2,22:24:66.19:786,66,0	1/1:1,20:21:51.16:614,51,0	0/0:34,0:34:87.14:0,87,840	0/0:33,0:33:90.13:0,90,863	1/1:1,19:20:51.16:616,51,0	0/0:36,0:36:93.14:0,93,898	0/0:28,0:28:78.12:0,78,753	1/1:3,26:29:78.24:942,78,0	1/1:3,26:29:78.24:942,78,0	1/1:4,12:16:36.11:428,36,0	1/1:1,21:23:66.07:776,66,0	1/1:1,25:26:66.20:797,66,0	0/0:25,0:25:72.12:0,72,694	0/0:20,0:20:54.08:0,54,521	0/0:32,0:32:90.09:0,90,854	1/1:1,21:22:63.19:761,63,0	1/1:3,29:32:65.43:1026,65,0	1/1:3,23:26:59.94:725,60,0	1/1:0,16:16:48.15:580,48,0
chr10	53900148	.	GCACACT	G	6552.79	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=10.739;DP=751;FS=11.461;HRun=0;HaplotypeScore=182.1290;InbreedingCoeff=0.9978;MQ=86.55;MQ0=0;MQRankSum=-15.253;QD=60.12;ReadPosRankSum=1.692;VQSLOD=4.7514;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,99,3257	1/1:0,11:11:27.09:664,27,0	0/0:28,0:28:78.25:0,78,2485	0/0:26,0:26:78.27:0,78,2792	0/0:33,0:33:93.32:0,93,3386	0/0:33,0:33:96.33:0,96,3518	0/0:23,0:23:69.24:0,69,2529	0/0:39,0:39:99:0,114,4010	0/0:21,0:21:63.22:0,63,2245	0/0:26,0:26:75.26:0,75,2703	0/0:17,0:17:48.16:0,48,1693	0/0:22,0:22:63.22:0,63,2309	0/0:30,0:30:90.31:0,90,3161	0/0:37,0:37:99:0,105,3809	1/1:3,26:29:72.25:1772,72,0	1/1:0,31:31:84.29:2001,84,0	1/1:3,24:27:54.19:1307,54,0	1/1:0,11:11:33.11:809,33,0	0/0:26,0:26:75.26:0,75,2682	0/0:16,0:16:48.16:0,48,1688	0/0:39,0:39:99:0,117,4268	0/0:23,0:23:66.23:0,66,2297	0/0:21,0:21:57.03:0,57,2088	0/0:23,0:23:69.24:0,69,2402	0/0:41,0:41:99:0,117,4095	0/0:37,0:37:99:0,111,4040	0/0:41,0:41:99:0,120,4251	0/0:6,0:6:18.06:0,18,592
chr10	53901070	.	TAA	T	5374.73	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=16.806;DP=870;FS=2.590;HRun=2;HaplotypeScore=109.1117;InbreedingCoeff=1.0000;MQ=82.87;MQ0=0;MQRankSum=-1.012;QD=40.11;ReadPosRankSum=5.064;VQSLOD=5.1215;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,120,2400	1/1:0,12:12:36.12:551,36,0	0/0:23,0:23:68.72:0,69,1329	0/0:27,0:27:81.14:0,81,1543	0/0:30,0:30:90.27:0,90,1768	0/0:43,0:43:99:0,129,2612	0/0:29,0:29:87.30:0,87,1727	0/0:41,0:41:99:0,123,2461	0/0:26,0:26:78.27:0,78,1585	0/0:46,0:46:99:0,138,2781	0/0:23,0:23:66.23:0,66,1341	0/0:34,0:34:99:0,102,2032	0/0:39,0:39:99:0,117,2302	0/0:42,0:42:99:0,126,2558	1/1:2,37:39:99:1608,105,0	1/1:0,38:38:99:1608,105,0	1/1:0,24:24:60.20:919,60,0	1/1:1,20:21:45.15:689,45,0	0/0:20,0:20:54.17:0,54,1059	0/0:22,0:22:66.23:0,66,1341	0/0:53,0:53:99:0,160,3219	0/0:40,0:40:99:0,120,2388	0/0:18,0:18:54.19:0,54,1097	0/0:22,0:21:66.23:0,66,1328	0/0:25,0:24:75.16:0,75,1405	0/0:39,0:39:99:0,114,2310	0/0:36,0:35:99:0,105,2133	0/0:18,0:18:54.14:0,54,1020
chr10	53902288	.	T	TA	630.90	PASS	AB=1.000;AC=6;AF=0.107;AN=56;BaseQRankSum=6.388;DP=371;FS=8.045;HRun=6;HaplotypeScore=49.9998;InbreedingCoeff=0.6118;MQ=73.46;MQ0=0;MQRankSum=-1.485;QD=11.07;ReadPosRankSum=0.974;VQSLOD=0.7635;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:75.16:0,75,762	0/0:6,0:6:7.15:0,7,16	0/1:16,0:15:9.56:10,0,135	0/0:4,0:4:9.41:0,9,72	0/0:14,0:14:39.05:0,39,383	0/0:10,0:10:27.06:0,27,275	0/0:12,0:12:32.99:0,33,310	0/0:28,0:28:66.10:0,66,651	0/0:19,0:19:48.08:0,48,476	0/0:16,0:16:42.08:0,42,417	0/0:14,0:14:36.07:0,36,360	0/0:16,0:16:45.04:0,45,439	0/0:10,0:10:27.04:0,27,267	0/0:8,0:8:21.05:0,21,214	0/0:12,0:12:15:0,15,34	0/1:16,0:16:9.12:9,0,34	1/1:0,14:14:36.01:426,36,0	1/1:4,7:11:27.04:318,27,0	0/0:7,0:7:21.05:0,21,214	0/0:17,0:17:42.01:0,42,397	0/0:8,0:8:24.05:0,24,244	0/0:10,0:10:24.05:0,24,244	0/0:13,0:13:39.07:0,39,390	0/0:6,0:6:18.04:0,18,183	0/0:15,0:15:45.10:0,45,458	0/0:16,0:16:45.09:0,45,453	0/0:17,0:17:45.09:0,45,451	0/0:9,0:9:27.06:0,27,275
chr10	53902334	.	A	AT	942.46	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=2.476;DP=305;FS=2.920;HRun=6;HaplotypeScore=33.5563;InbreedingCoeff=0.8322;MQ=63.40;MQ0=2;MQRankSum=0.518;QD=18.85;ReadPosRankSum=1.830;VQSLOD=2.6576;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:69.08:0,69,691	1/1:1,4:5:12.04:151,12,0	0/0:6,0:4:6.01:0,6,61	0/1:6,0:4:20.95:21,0,25	0/0:14,0:14:42.08:0,42,422	0/0:6,0:6:18.03:0,18,177	0/0:10,0:10:21.04:0,21,214	0/0:23,0:22:48.09:0,48,484	0/0:11,0:11:30.07:0,30,306	0/0:10,0:10:24.05:0,24,245	0/0:9,0:9:24.05:0,24,245	0/0:7,0:7:18.04:0,18,184	0/0:12,0:12:36.06:0,36,360	0/0:7,0:7:18.04:0,18,184	1/1:3,8:11:24.08:302,24,0	1/1:2,6:8:15.05:189,15,0	1/1:4,4:8:12.04:151,12,0	1/1:2,10:12:24.08:302,24,0	0/0:7,0:6:18.04:0,18,183	0/0:14,0:14:39.09:0,39,398	0/0:10,0:10:27.06:0,27,275	0/0:4,0:4:12.03:0,12,122	0/0:14,0:14:42.10:0,42,428	0/0:9,0:9:27.01:0,27,259	0/0:21,0:21:63.14:0,63,643	0/0:8,0:8:18.04:0,18,184	0/0:12,0:12:30.06:0,30,306	0/0:16,0:16:42.10:0,42,428
chr10	53902438	.	C	CA	6590.34	PASS	AB=1.000;AC=49;AF=0.980;AN=50;BaseQRankSum=-2.795;DP=210;FS=0.000;HRun=1;HaplotypeScore=32.4084;InbreedingCoeff=0.1881;MQ=51.44;MQ0=2;MQRankSum=-2.149;QD=32.15;ReadPosRankSum=0.534;VQSLOD=4.2158;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,11:13:24.08:359,24,0	./.	./.	0/1:8,0:5:3.45:3,0,53	1/1:2,9:11:27.05:380,27,0	1/1:0,8:8:18.06:269,18,0	1/1:1,7:8:9.03:135,9,0	1/1:2,11:12:36.12:539,36,0	1/1:0,8:8:21.07:314,21,0	1/1:1,3:4:12.04:172,12,0	1/1:1,13:14:32.98:407,33,0	1/1:0,10:10:24.04:333,24,0	1/1:0,5:5:6.15:90,6,0	1/1:0,10:10:24.08:358,24,0	1/1:0,0:2:5.50:39,6,0	1/1:0,0:7:21.04:209,21,0	./.	1/1:1,0:3:6.01:59,6,0	1/1:0,7:7:21.07:308,21,0	1/1:1,8:9:18.02:245,18,0	1/1:0,7:6:12.04:180,12,0	1/1:1,4:5:15.02:200,15,0	1/1:0,13:13:36.12:529,36,0	1/1:0,3:3:6.02:90,6,0	1/1:0,10:10:27.08:404,27,0	1/1:0,17:17:48.13:672,48,0	1/1:2,5:7:15.05:225,15,0	1/1:0,1:3:6.01:73,6,0
chr10	53903790	.	AGCCAGC	A	3459.17	PASS	AB=0.944;AC=52;AF=0.963;AN=54;BaseQRankSum=0.230;DP=107;FS=10.179;HRun=0;HaplotypeScore=104.0514;InbreedingCoeff=-0.1208;MQ=104.38;MQ0=0;MQRankSum=-3.801;QD=32.33;ReadPosRankSum=0.852;VQSLOD=2.9886;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,0:3:2.99:23,3,0	1/1:0,1:1:3.01:58,3,0	0/1:9,0:9:70.71:94,0,71	0/1:6,0:8:28.47:74,0,28	1/1:12,0:12:32.89:364,33,0	1/1:0,5:5:15.05:290,15,0	1/1:1,0:1:3:27,3,0	1/1:2,0:2:6.01:55,6,0	1/1:4,0:4:12.02:164,12,0	1/1:1,2:3:9.01:145,9,0	1/1:0,2:2:3.01:57,3,0	1/1:2,0:2:5.99:50,6,0	1/1:2,0:2:5.99:50,6,0	1/1:7,0:7:21.03:272,21,0	1/1:2,6:8:24.06:392,24,0	1/1:0,4:4:12.04:232,12,0	1/1:1,0:1:3.01:40,3,0	1/1:3,0:3:9.01:93,9,0	1/1:0,4:4:8.96:71,9,0	1/1:4,2:6:18.01:216,18,0	1/1:2,0:2:3:25,3,0	1/1:3,0:3:8.86:60,9,0	1/1:2,0:2:5.99:51,6,0	./.	1/1:2,0:2:6.01:75,6,0	1/1:2,2:4:12.02:172,12,0	1/1:1,3:5:15.04:262,15,0	1/1:2,0:2:5.99:48,6,0
chr10	53903808	.	ACCGGGAGAGGC	A	3671.68	PASS	AC=30;AF=0.938;AN=32;BaseQRankSum=1.654;DP=45;FS=0.000;HRun=0;HaplotypeScore=134.0732;InbreedingCoeff=0.2152;MQ=60.59;MQ0=0;MQRankSum=-1.732;QD=85.39;ReadPosRankSum=1.654;VQSLOD=3.5894;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	1/1:0,1:1:3.01:82,3,0	0/0:1,0:1:2.94:0,3,18	./.	1/1:5,0:5:15.05:474,15,0	1/1:0,5:5:15.05:399,15,0	./.	./.	1/1:3,0:3:9.03:300,9,0	1/1:0,2:2:6.02:165,6,0	1/1:0,2:2:5.98:100,6,0	./.	./.	1/1:4,0:4:12.04:407,12,0	1/1:1,5:6:18.06:474,18,0	1/1:0,4:4:12.04:321,12,0	1/1:0,1:1:3.01:94,3,0	1/1:0,1:1:3.01:95,3,0	./.	1/1:0,2:2:6.02:163,6,0	./.	./.	./.	./.	1/1:1,0:1:3.01:103,3,0	1/1:0,2:2:6.02:164,6,0	1/1:0,3:4:12.04:329,12,0	./.
chr10	53903810	.	CGGG	C	1188.01	PASS	AC=30;AF=0.938;AN=32;BaseQRankSum=1.652;DP=45;FS=3.112;HRun=3;HaplotypeScore=135.5450;InbreedingCoeff=0.2041;MQ=60.59;MQ0=0;MQRankSum=-1.733;QD=27.63;ReadPosRankSum=1.652;VQSLOD=1.2983;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	1/1:1,0:1:2.99:23,3,0	0/0:1,0:1:3.01:0,3,30	./.	1/1:0,5:5:14.79:198,15,0	1/1:5,0:5:14.96:120,15,0	./.	./.	1/1:0,3:3:9.03:127,9,0	1/1:2,0:2:5.99:48,6,0	1/1:2,0:2:2.99:24,3,0	./.	./.	1/1:0,4:4:12.04:187,12,0	1/1:6,0:6:17.97:150,18,0	1/1:4,0:4:11.97:96,12,0	1/1:1,0:1:3.01:36,3,0	1/1:1,0:1:3.01:35,3,0	./.	1/1:2,0:2:5.98:46,6,0	./.	./.	./.	./.	1/1:0,1:1:3.01:44,3,0	1/1:2,0:2:5.99:48,6,0	1/1:4,0:4:11.96:93,12,0	./.
chr10	53903816	.	AGG	A	556.29	PASS	AC=30;AF=1.000;AN=30;DP=43;FS=0.000;HRun=2;HaplotypeScore=153.9138;InbreedingCoeff=-0.0347;MQ=29.00;MQ0=0;QD=12.94;VQSLOD=0.6863;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	1/1:1,0:1:2.88:15,3,0	./.	./.	1/1:0,5:5:12.32:79,12,0	1/1:5,0:5:12.48:57,12,0	./.	./.	1/1:0,3:3:8.88:57,9,0	1/1:2,0:2:5.75:29,6,0	1/1:2,0:2:2.84:14,3,0	./.	./.	1/1:0,4:4:11.87:80,12,0	1/1:6,0:6:16.64:78,17,0	1/1:4,0:4:11.23:54,11,0	1/1:1,0:1:2.88:15,3,0	1/1:1,0:1:2.88:15,3,0	./.	1/1:2,0:2:5.72:29,6,0	./.	./.	./.	./.	1/1:0,1:1:2.97:20,3,0	1/1:2,0:2:5.75:30,6,0	1/1:4,0:4:11.47:58,11,0	./.
chr10	53903821	.	CGGGAGCGG	C	2716.68	PASS	AC=30;AF=0.938;AN=32;BaseQRankSum=1.652;DP=44;FS=0.000;HRun=0;HaplotypeScore=141.3313;InbreedingCoeff=0.1999;MQ=47.83;MQ0=0;MQRankSum=-1.733;QD=63.18;ReadPosRankSum=1.652;VQSLOD=3.7329;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	1/1:0,1:1:3.01:63,3,0	./.	0/0:1,0:1:2.94:0,3,18	1/1:0,5:5:15.05:347,15,0	1/1:0,5:5:15.05:307,15,0	./.	./.	1/1:0,3:3:9.03:234,9,0	1/1:0,2:2:6.02:128,6,0	1/1:0,2:2:3.01:60,3,0	./.	./.	1/1:0,4:4:12.04:318,12,0	1/1:1,5:6:18.06:367,18,0	1/1:0,4:4:12.04:249,12,0	1/1:0,1:1:3.01:73,3,0	1/1:0,1:1:3.01:74,3,0	./.	1/1:0,2:2:6.02:124,6,0	./.	./.	./.	./.	1/1:0,1:1:3.01:79,3,0	1/1:0,2:2:6.02:127,6,0	1/1:0,4:4:12.04:253,12,0	./.
chr10	53903832	.	ACGG	A	2034.44	PASS	AB=1.000;AC=33;AF=0.825;AN=40;BaseQRankSum=4.760;DP=62;FS=5.490;HRun=0;HaplotypeScore=120.2689;InbreedingCoeff=0.4511;MQ=100.76;MQ0=0;MQRankSum=-3.904;QD=39.89;ReadPosRankSum=3.669;VQSLOD=5.0700;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	1/1:1,1:2:5.75:64,6,0	0/0:4,0:4:11.39:0,11,95	0/0:6,0:5:8.24:0,8,92	1/1:1,5:6:17.95:251,18,0	1/1:0,5:5:15.05:253,15,0	./.	./.	1/1:1,3:4:1.43:127,1,0	1/1:0,2:2:6.02:106,6,0	1/1:1,2:3:3.48:47,3,0	./.	0/0:1,0:1:2.98:0,3,22	1/1:1,4:5:12.04:198,12,0	1/1:1,5:6:18.06:297,18,0	1/1:0,4:4:12.04:206,12,0	1/1:0,1:1:3.01:55,3,0	1/1:0,1:1:3.01:55,3,0	./.	1/1:0,2:2:6.02:103,6,0	./.	./.	0/1:2,0:2:0.29:0,0,0	1/1:1,0:1:3:26,3,0	1/1:0,1:1:3.01:48,3,0	1/1:0,2:2:6.02:106,6,0	1/1:0,4:4:12.04:207,12,0	./.
chr10	53903833	.	C	CA	1224.47	PASS	AC=36;AF=0.900;AN=40;BaseQRankSum=3.716;DP=65;FS=6.456;HRun=3;HaplotypeScore=122.7443;InbreedingCoeff=0.3860;MQ=112.52;MQ0=0;MQRankSum=-4.261;QD=23.55;ReadPosRankSum=4.113;VQSLOD=2.9206;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	1/1:1,1:2:6.01:63,6,0	0/0:6,0:6:10.20:0,10,54	0/0:7,0:6:5.63:0,6,16	1/1:5,1:6:14.42:145,14,0	1/1:5,0:5:14.81:106,15,0	./.	./.	1/1:4,0:4:12.03:137,12,0	1/1:2,0:2:5.99:47,6,0	1/1:3,0:3:6:52,6,0	./.	1/1:0,1:1:3.01:38,3,0	1/1:5,0:5:12.04:140,12,0	1/1:6,0:6:17.87:131,18,0	1/1:4,0:4:11.95:94,12,0	1/1:1,0:1:3:25,3,0	1/1:1,0:1:3:25,3,0	./.	1/1:2,0:2:5.97:45,6,0	./.	./.	1/1:2,0:2:6.02:65,6,0	1/1:0,1:1:3.01:39,3,0	1/1:1,0:1:3.01:35,3,0	1/1:2,0:2:5.99:48,6,0	1/1:4,0:4:11.96:94,12,0	./.
chr10	53903839	.	C	CA	1566.62	PASS	AB=0.986;AC=37;AF=0.661;AN=56;BaseQRankSum=6.358;DP=357;FS=1.058;HRun=0;HaplotypeScore=153.8117;InbreedingCoeff=0.0366;MQ=66.80;MQ0=0;MQRankSum=-1.698;QD=4.99;ReadPosRankSum=-1.727;VQSLOD=2.8268;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:0.64:0,1,3	1/1:7,0:7:3.83:58,4,0	0/1:9,0:9:19.18:19,0,34	0/1:11,0:10:19.07:50,0,19	1/1:15,0:15:14.87:178,15,0	1/1:22,0:22:11.24:120,11,0	0/0:10,0:10:2.85:0,3,8	1/1:13,1:14:10.40:92,10,0	1/1:15,0:15:4.65:146,5,0	1/1:12,0:12:10.99:81,11,0	0/1:11,1:12:3.70:59,0,4	0/0:16,0:16:13.50:0,14,54	1/1:19,0:19:1.46:77,1,0	1/1:14,0:14:5.96:131,6,0	1/1:20,1:21:14.91:165,15,0	1/1:13,0:13:4.25:79,4,0	0/1:10,0:10:0.91:20,0,1	1/1:8,0:8:0.52:25,1,0	0/1:13,0:13:1.28:44,0,1	1/1:11,0:11:4.59:61,5,0	0/0:3,0:3:1.32:0,1,3	0/1:13,0:13:8.35:13,0,8	0/1:20,1:21:12.53:50,0,13	1/1:5,0:5:1.26:27,1,0	0/1:14,0:14:2.34:49,0,2	1/1:17,0:17:4.71:65,5,0	0/1:18,0:18:6.77:94,0,7	0/0:3,0:3:1.30:0,1,3
chr10	53903841	.	C	CA	2222	PASS	AB=0.952;AC=48;AF=0.857;AN=56;BaseQRankSum=3.076;DP=369;FS=0.000;HRun=1;HaplotypeScore=153.9747;InbreedingCoeff=-0.0866;MQ=67.65;MQ0=0;MQRankSum=-0.026;QD=6.02;ReadPosRankSum=-1.487;VQSLOD=-0.1879;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,0:12:6.53:36,7,0	1/1:7,0:7:5.30:63,5,0	0/1:8,1:10:9.24:75,0,9	0/1:8,3:10:3.83:69,0,4	1/1:15,0:15:19.56:210,20,0	1/1:22,0:22:21.99:157,22,0	0/1:10,0:10:0.13:16,0,0	1/1:16,0:16:16.51:120,17,0	1/1:16,0:16:11.98:165,12,0	1/1:13,0:13:14.32:108,14,0	1/1:13,0:13:1.83:83,2,0	0/1:17,0:17:10.83:11,0,11	1/1:19,0:19:8.83:98,9,0	1/1:15,0:15:8.91:161,9,0	1/1:22,0:22:23.75:198,24,0	1/1:13,0:13:11.60:122,12,0	1/1:10,0:10:4.03:45,4,0	1/1:8,0:8:6.14:65,6,0	1/1:13,0:13:3.13:51,3,0	1/1:11,0:11:6.79:67,7,0	1/1:3,0:3:0.98:3,1,0	0/1:13,0:13:0.32:37,0,0	0/1:21,0:21:9.99:73,0,10	1/1:5,0:5:3.09:40,3,0	1/1:15,0:15:4.12:76,4,0	0/1:17,0:17:23.12:61,0,23	1/1:19,0:19:1.14:123,1,0	0/1:3,0:3:0.05:0,0,0
chr10	53904050	.	GA	G	573.71	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.740;DP=617;FS=5.070;HRun=8;HaplotypeScore=59.0820;InbreedingCoeff=0.9915;MQ=71.56;MQ0=1;MQRankSum=-0.273;QD=19.78;ReadPosRankSum=2.987;VQSLOD=3.7226;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:39.09:0,39,446	0/0:15,0:15:45.14:0,45,542	0/0:13,0:12:16.71:0,17,195	0/0:13,0:13:26.42:0,26,270	0/0:34,0:34:87.27:0,87,1051	0/0:28,0:28:72.20:0,72,848	0/0:20,0:20:57.17:0,57,689	0/0:35,0:35:99:0,99,1151	0/0:22,0:22:57.17:0,57,689	0/0:31,0:31:84.26:0,84,1012	0/0:24,0:24:60.17:0,60,714	0/0:12,0:12:27.06:0,27,303	0/0:18,0:18:54.13:0,54,621	0/0:18,0:18:54.15:0,54,641	0/0:20,0:20:51.14:0,51,595	0/0:26,0:26:75.21:0,75,884	1/1:2,18:20:48.07:463,48,0	1/1:1,8:9:24.04:232,24,0	0/0:18,0:18:48.15:0,48,580	0/0:35,0:35:90.21:0,90,1057	0/0:9,0:9:27.08:0,27,326	0/0:30,0:30:84.21:0,84,987	0/0:25,0:25:72.22:0,72,869	0/0:13,0:13:33.08:0,33,375	0/0:17,0:17:48.15:0,48,580	0/0:31,0:31:90.28:0,90,1087	0/0:42,0:42:99:0,117,1400	0/0:23,0:23:66.20:0,66,797
chr10	53906617	.	T	TTCTCTCTC	5730.06	PASS	AB=0.912;AC=41;AF=0.759;AN=54;BaseQRankSum=3.367;DP=587;FS=33.210;HRun=0;HaplotypeScore=175.2300;InbreedingCoeff=0.4154;MQ=59.67;MQ0=7;MQRankSum=-7.440;QD=11.44;ReadPosRankSum=-4.363;VQSLOD=1.1262;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:27:3.62:4,0,402	1/1:11,0:9:2.96:23,3,0	1/1:23,0:17:2.69:8,3,0	0/0:26,0:17:3.01:0,3,71	1/1:23,0:23:3.01:58,3,0	1/1:24,1:25:13.86:173,14,0	1/1:15,1:16:3.48:101,3,0	1/1:50,0:51:42.06:829,42,0	1/1:13,0:13:5.54:24,6,0	1/1:19,2:21:33.93:700,34,0	0/1:21,1:28:0:0,0,0	0/1:25,0:24:64.53:65,0,703	0/0:17,0:18:30.09:0,30,657	1/1:12,0:12:3:27,3,0	1/1:23,1:28:12.04:420,12,0	1/1:24,0:32:12.04:379,12,0	1/1:11,0:11:9.03:295,9,0	1/1:9,0:7:9.03:279,9,0	1/1:15,1:16:20.55:601,21,0	1/1:18,5:24:3.11:8,3,0	./.	0/1:16,0:24:0.11:0,0,585	0/0:14,0:13:20.90:0,21,508	0/0:23,0:24:33.54:0,34,708	0/1:24,0:24:55.76:60,0,56	1/1:14,6:21:36.09:913,36,0	1/1:20,5:24:27.02:741,27,0	1/1:6,0:6:2.98:22,3,0
chr10	53906653	.	C	CTCTCTG	4082	PASS	AB=0.826;AC=33;AF=0.589;AN=56;BaseQRankSum=10.593;DP=587;FS=3.983;HRun=0;HaplotypeScore=159.6133;InbreedingCoeff=0.2776;MQ=50.64;MQ0=5;MQRankSum=-9.001;QD=9.36;ReadPosRankSum=-2.705;VQSLOD=2.2329;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:31,0:30:1.47:1,0,512	0/1:5,0:3:16.97:17,0,19	0/0:15,0:12:20.64:0,21,242	0/0:20,0:12:16.35:0,16,231	0/1:6,30:40:39.66:99,0,40	1/1:12,0:23:14.81:177,15,0	1/1:5,0:17:5.95:69,6,0	0/1:16,0:28:66.80:360,0,67	1/1:1,1:19:6.02:101,6,0	0/1:11,0:23:19.96:476,0,20	1/1:26,0:22:2.76:25,3,0	0/0:25,0:24:54.43:0,54,854	0/0:23,0:23:66.02:0,66,914	1/1:2,17:22:3.01:76,3,0	0/1:27,0:25:99:145,0,185	0/1:27,0:26:77.69:113,0,78	1/1:13,0:13:35.24:265,35,0	1/1:9,0:7:8.51:103,9,0	0/1:8,0:18:67.91:384,0,68	1/1:17,0:17:9.78:92,10,0	1/1:6,0:6:11.83:81,12,0	0/0:20,0:20:28.28:0,28,570	0/0:21,0:20:50.90:0,51,660	0/0:27,0:27:63.02:0,63,840	0/1:10,1:29:39.08:147,0,39	1/1:22,0:23:56.63:672,57,0	1/1:11,0:23:35.99:550,36,0	1/1:7,0:7:19.08:130,19,0
chr10	53910076	.	T	TTCCGTGAAGG	2360.62	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-1.233;DP=694;FS=13.914;HRun=0;HaplotypeScore=194.6504;InbreedingCoeff=0.9680;MQ=74.11;MQ0=0;MQRankSum=-6.780;QD=112.41;ReadPosRankSum=1.167;VQSLOD=3.2342;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:93.32:0,93,3147	0/0:9,0:9:24.08:0,24,833	0/0:13,0:13:39.13:0,39,1213	0/0:14,0:14:33.11:0,33,951	0/0:39,0:39:99:0,117,3871	0/0:25,0:25:75.26:0,75,2419	0/0:27,0:27:78.27:0,78,2721	0/0:46,0:44:99:0,129,4015	0/0:21,0:21:60.21:0,60,2034	0/0:29,0:29:87.29:0,87,2830	0/0:27,0:27:75.26:0,75,2530	0/0:26,0:26:78.25:0,78,2495	0/0:33,0:33:99:0,99,3144	0/0:25,0:25:75.26:0,75,2546	0/0:32,0:32:90.31:0,90,2949	0/0:28,0:28:84.27:0,84,2801	1/1:5,9:15:39.13:1997,39,0	1/1:2,1:6:9.03:478,9,0	0/0:18,0:18:54.19:0,54,1829	0/0:24,0:24:66.23:0,66,2222	0/0:28,0:28:81.28:0,81,2769	0/0:15,0:15:42.14:0,42,1415	0/0:25,0:25:75.24:0,75,2373	0/0:20,0:20:60.21:0,60,2059	0/0:22,0:22:66.23:0,66,2186	0/0:40,0:40:99:0,117,3860	0/0:30,0:30:87.28:0,87,2811	0/0:25,0:25:60.21:0,60,2079
chr10	53910150	.	GTAGA	G	7907.56	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=10.712;DP=673;FS=0.748;HRun=0;HaplotypeScore=119.4525;InbreedingCoeff=0.9522;MQ=65.22;MQ0=0;MQRankSum=1.977;QD=27.17;ReadPosRankSum=1.962;VQSLOD=4.8205;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:51.18:0,51,1236	1/1:4,6:10:15.05:246,15,0	0/0:31,0:29:36.09:0,36,680	0/0:18,0:17:27.09:0,27,575	0/0:41,0:42:93.29:0,93,2140	1/1:6,20:26:51.17:835,51,0	1/1:6,11:17:21.07:344,21,0	0/0:37,0:37:60.98:0,61,869	0/0:31,0:31:81.28:0,81,1907	1/1:11,29:39:87.28:1389,87,0	1/1:13,14:27:33.03:494,33,0	0/0:24,0:24:60.21:0,60,1423	0/0:16,0:16:33.11:0,33,798	0/0:19,0:19:45.15:0,45,1097	1/1:9,16:25:45.15:705,45,0	1/1:5,16:21:39.13:639,39,0	0/0:20,0:20:9.40:0,9,66	0/0:7,0:7:5.97:0,6,58	1/1:3,3:6:9:109,9,0	1/1:11,22:33:63.15:978,63,0	1/1:7,11:18:21.07:344,21,0	0/0:33,0:33:84.29:0,84,1970	0/0:31,0:31:57.16:0,57,1263	0/0:21,0:21:42.14:0,42,1020	0/0:29,0:29:72.21:0,72,1639	1/1:6,17:23:51.16:793,51,0	1/1:7,22:30:57.19:933,57,0	1/1:5,10:15:6.02:98,6,0
chr10	53912493	.	C	CTAGTGA	1393.46	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=2.727;DP=695;FS=1.026;HRun=0;HaplotypeScore=145.4692;InbreedingCoeff=0.9816;MQ=86.59;MQ0=0;MQRankSum=-6.361;QD=77.41;ReadPosRankSum=0.418;VQSLOD=4.7074;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,123,2906	0/0:7,0:7:21.07:0,21,505	0/0:26,0:26:75.24:0,75,1703	0/0:22,0:22:60.21:0,60,1300	0/0:24,0:24:72.25:0,72,1685	0/0:20,0:20:60.21:0,60,1441	0/0:35,0:35:96.32:0,96,2163	0/0:35,0:35:99:0,99,2343	0/0:27,0:27:75.26:0,75,1762	0/0:24,0:24:72.24:0,72,1672	0/0:23,0:23:69.22:0,69,1589	0/0:36,0:36:99:0,99,2379	0/0:37,0:37:99:0,111,2601	0/0:36,0:36:99:0,102,2373	0/0:35,0:35:99:0,102,2430	0/0:22,0:22:63.22:0,63,1513	1/1:2,12:14:30.10:1078,30,0	1/1:0,4:4:12.04:432,12,0	0/0:24,0:24:66.23:0,66,1537	0/0:27,0:27:75.26:0,75,1800	0/0:21,0:21:60.19:0,60,1363	0/0:26,0:26:72.25:0,72,1662	0/0:22,0:22:66.23:0,66,1568	0/0:20,0:20:60.16:0,60,1355	0/0:27,0:27:81.28:0,81,1946	0/0:16,0:16:45.15:0,45,1063	0/0:21,0:20:54.19:0,54,1244	0/0:23,0:23:69.24:0,69,1659
chr10	53912502	.	C	CATATCTACT	2733.76	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.953;DP=706;FS=0.833;HRun=0;HaplotypeScore=197.4876;InbreedingCoeff=0.9975;MQ=83.07;MQ0=0;MQRankSum=-6.704;QD=94.27;ReadPosRankSum=0.853;VQSLOD=3.7924;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,126,3761	0/0:7,0:7:21.07:0,21,652	0/0:23,0:23:63.20:0,63,1744	0/0:23,0:23:60.20:0,60,1642	0/0:27,0:27:78.74:0,79,2261	0/0:19,0:19:54.19:0,54,1676	0/0:32,0:32:93.32:0,93,2818	0/0:35,0:35:99:0,102,3021	0/0:32,0:32:84.26:0,84,2437	0/0:26,0:26:72.25:0,72,2216	0/0:23,0:23:63.20:0,63,1826	0/0:34,0:34:90.31:0,90,2681	0/0:39,0:39:99:0,111,3407	0/0:37,0:37:99:0,105,3009	0/0:35,0:35:99:0,102,3015	0/0:21,0:21:63.20:0,63,1886	1/1:13,6:19:32.90:1387,33,0	1/1:7,3:10:30.10:1468,30,0	0/0:20,0:20:60.19:0,60,1602	0/0:21,0:21:57.20:0,57,1727	0/0:25,0:25:75.24:0,75,2177	0/0:25,0:25:75.24:0,75,2203	0/0:22,0:22:66.21:0,66,1980	0/0:23,0:23:63.16:0,63,1780	0/0:26,0:26:75.26:0,75,2280	0/0:18,0:18:54.18:0,54,1565	0/0:19,0:18:54.19:0,54,1607	0/0:22,0:22:51.14:0,51,1323
chr10	53912799	.	CGT	C	11615.25	PASS	AB=0.950;AC=43;AF=0.768;AN=56;BaseQRankSum=9.586;DP=769;FS=3.763;HRun=0;HaplotypeScore=97.3936;InbreedingCoeff=0.7457;MQ=64.86;MQ0=10;MQRankSum=0.791;QD=18.79;ReadPosRankSum=4.549;VQSLOD=4.5520;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,1:38:39.06:0,39,1084	1/1:1,8:10:17.89:195,18,0	0/0:29,0:22:30.08:0,30,394	0/1:29,1:20:15.90:16,0,187	1/1:4,24:28:60.14:707,60,0	1/1:2,19:22:47.98:557,48,0	1/1:10,18:30:44.79:498,45,0	1/1:10,19:28:57.24:680,57,0	1/1:5,13:18:33.10:398,33,0	1/1:8,20:27:57.16:672,57,0	1/1:7,17:24:48.11:562,48,0	0/0:25,0:25:57.19:0,57,906	0/0:29,0:29:66.21:0,66,1020	1/1:11,24:37:62.86:715,63,0	1/1:5,21:28:7.72:524,8,0	1/1:3,18:20:45.14:543,45,0	1/1:15,27:42:53.35:780,53,0	1/1:8,23:29:42.32:635,42,0	1/1:10,14:22:34.85:363,35,0	1/1:7,19:27:23.22:592,23,0	1/1:16,25:41:41.06:704,41,0	0/1:24,1:25:0.32:0,0,753	0/1:21,2:23:15.19:15,0,728	0/0:30,0:29:54.18:0,54,867	1/1:6,22:28:58.73:691,59,0	1/1:5,19:24:57.17:684,57,0	1/1:6,23:28:57.17:687,57,0	1/1:5,12:17:33.10:398,33,0
chr10	53915509	.	TA	T	8432.66	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=11.123;DP=604;FS=0.000;HRun=9;HaplotypeScore=68.1749;InbreedingCoeff=0.9924;MQ=70.99;MQ0=0;MQRankSum=-1.528;QD=18.74;ReadPosRankSum=0.202;VQSLOD=4.9635;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:51.12:0,51,575	1/1:0,0:8:12.22:36,12,0	0/0:17,0:14:19.48:0,19,192	0/0:15,0:15:20.64:0,21,226	1/1:1,21:22:54.01:494,54,0	1/1:2,21:23:57.03:522,57,0	1/1:1,15:16:39.02:357,39,0	1/1:7,0:32:50.92:149,51,0	1/1:1,17:18:48.03:439,48,0	1/1:2,19:21:57.03:522,57,0	1/1:1,20:21:28.52:457,29,0	0/0:16,0:16:48.13:0,48,544	0/0:25,0:25:52.32:0,52,690	1/1:2,19:21:48.01:439,48,0	1/1:1,0:19:34.63:102,35,0	1/1:2,0:28:44.81:132,45,0	1/1:8,34:42:93.04:851,93,0	1/1:3,9:12:21.01:192,21,0	1/1:8,21:29:31.39:537,31,0	1/1:3,29:32:84:761,84,0	1/1:2,17:19:42.02:384,42,0	0/0:17,0:17:42.12:0,42,477	0/0:17,0:17:48.14:0,48,552	0/0:25,0:25:75.22:0,75,866	1/1:3,23:26:60.03:549,60,0	1/1:4,19:23:57.03:520,57,0	1/1:2,21:23:63.03:577,63,0	1/1:0,15:15:45.02:412,45,0
chr10	53915925	.	AG	A	1771.75	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=7.170;DP=672;FS=6.838;HRun=9;HaplotypeScore=72.7237;InbreedingCoeff=0.9952;MQ=76.51;MQ0=0;MQRankSum=-1.154;QD=17.20;ReadPosRankSum=1.973;VQSLOD=3.7543;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:75.18:0,75,835	0/0:7,0:7:15.03:0,15,163	0/0:26,0:25:46.89:0,47,436	0/0:28,0:26:32.46:0,32,298	1/1:6,17:23:44.94:397,45,0	0/0:25,0:25:66.10:0,66,715	0/0:36,0:36:92.69:0,93,1074	0/0:20,0:20:47.75:0,48,472	1/1:3,18:21:48.02:439,48,0	0/0:18,0:18:38.99:0,39,414	0/0:22,0:22:57.16:0,57,650	0/0:28,0:28:75.18:0,75,836	0/0:29,0:29:67.10:0,67,757	1/1:4,28:32:63.03:576,63,0	0/0:33,0:33:90.23:0,90,1006	0/0:19,0:19:54.14:0,54,605	0/0:8,0:31:66.10:0,66,343	0/0:4,0:16:31.59:0,32,160	0/0:17,0:18:53.98:0,54,589	0/0:27,0:27:75.21:0,75,855	0/0:31,0:31:78.08:0,78,820	0/0:17,0:17:39.07:0,39,421	0/0:20,0:20:48.13:0,48,544	0/0:28,0:28:63.10:0,63,681	1/1:4,23:27:57.03:521,57,0	0/0:33,0:33:84.19:0,84,924	0/0:16,0:16:36.02:0,36,371	0/0:11,0:11:33.08:0,33,370
chr10	53919262	.	T	TCACA	336.67	PASS	AB=0.901;AC=10;AF=0.185;AN=54;BaseQRankSum=2.805;DP=582;FS=7.895;HRun=0;HaplotypeScore=142.5454;InbreedingCoeff=0.4098;MQ=65.78;MQ0=5;MQRankSum=-3.606;QD=1.98;ReadPosRankSum=-2.546;VQSLOD=1.2925;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:45.15:0,45,709	0/1:5,5:10:0:0,0,1	0/1:24,0:20:0:0,0,0	./.	0/0:16,0:16:27.08:0,27,365	0/0:16,0:16:3:0,3,32	0/1:29,0:29:5.41:5,0,128	1/1:23,0:22:17.74:197,18,0	0/0:12,0:11:21.06:0,21,298	0/0:19,0:19:27.07:0,27,328	0/0:17,0:16:15.39:0,15,163	0/0:20,0:22:42.56:0,43,547	0/0:14,0:14:20.99:0,21,240	0/0:26,0:27:51.13:0,51,700	1/1:7,1:15:8.78:120,9,0	0/1:15,6:23:0:0,0,0	0/1:25,0:25:49.22:69,0,49	0/1:21,0:19:27.65:72,0,28	0/0:12,0:11:6.28:0,6,95	0/0:20,0:20:14.45:0,14,128	0/0:40,0:40:6.01:0,6,65	0/0:16,0:18:30.08:0,30,430	0/0:14,0:15:24.07:0,24,358	0/0:34,0:40:59.90:0,60,886	0/0:27,0:28:44.14:0,44,589	0/0:28,0:28:37.14:0,37,368	0/0:10,0:10:8.95:0,9,76	0/0:9,0:9:6.01:0,6,61
chr10	53919292	.	ACACGCG	A	3695.25	PASS	AB=0.997;AC=25;AF=0.446;AN=56;BaseQRankSum=4.236;DP=633;FS=0.825;HRun=0;HaplotypeScore=157.3791;InbreedingCoeff=0.1396;MQ=55.42;MQ0=10;MQRankSum=-0.534;QD=9.22;ReadPosRankSum=-3.170;VQSLOD=2.1844;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:78.24:0,78,1823	1/1:10,0:10:8.38:103,8,0	0/0:12,0:2:3.01:0,3,50	0/0:15,0:3:6.02:0,6,94	0/1:21,0:21:9.83:10,0,651	0/1:17,0:17:4.20:4,0,14	0/1:34,1:35:30.91:31,0,82	0/1:33,0:31:99:717,0,202	0/1:14,0:13:13.73:14,0,468	1/1:23,0:23:15.89:494,16,0	0/1:24,0:23:9.02:31,0,9	0/0:30,0:30:47.73:0,48,1597	0/0:13,0:12:36.11:0,36,955	0/0:24,0:24:56.74:0,57,1175	0/1:18,0:18:69.17:167,0,69	0/1:21,0:20:63.65:114,0,64	0/1:28,0:28:99:291,0,165	0/1:19,0:18:99:137,0,225	1/1:12,0:12:31.35:370,31,0	1/1:21,0:21:7.21:81,7,0	0/1:49,0:48:10.54:11,0,17	0/0:18,0:18:30.89:0,31,1138	0/0:23,0:21:47.91:0,48,1069	0/0:40,0:40:84.27:0,84,2293	0/0:26,0:25:60.13:0,60,1258	1/1:27,2:29:49.66:840,50,0	1/1:15,0:15:1.69:205,2,0	1/1:11,1:12:5.50:76,6,0
chr10	53919294	.	ACGCG	A	5521.35	PASS	AB=0.973;AC=30;AF=0.536;AN=56;BaseQRankSum=1.463;DP=628;FS=4.952;HRun=0;HaplotypeScore=135.2452;InbreedingCoeff=0.4301;MQ=55.51;MQ0=10;MQRankSum=-0.722;QD=14.30;ReadPosRankSum=-3.508;VQSLOD=3.3193;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:70.50:0,70,1298	1/1:10,0:10:9.03:145,9,0	0/0:14,0:3:3.48:0,3,51	0/0:15,0:3:6.02:0,6,94	0/1:19,0:19:49.01:49,0,439	1/1:3,13:16:3.01:56,3,0	1/1:6,26:32:11.71:177,12,0	0/1:30,0:28:24.89:731,0,25	0/1:14,0:13:59.08:59,0,198	1/1:1,22:23:57.19:886,57,0	1/1:2,21:22:15.39:277,15,0	0/0:29,0:29:66.13:0,66,1225	0/0:14,0:13:39.07:0,39,739	0/0:25,0:26:15.18:0,15,655	1/1:18,0:18:0.58:176,1,0	0/1:20,0:19:36.01:117,0,36	0/1:25,0:27:23.95:352,0,24	0/1:17,0:18:75.09:226,0,75	1/1:1,11:12:30.10:414,30,0	1/1:1,19:21:16.41:206,16,0	1/1:7,41:47:6.02:110,6,0	0/0:17,0:17:25.06:0,25,810	0/0:24,0:22:46.67:0,47,840	0/0:43,0:43:85.38:0,85,1658	0/0:27,0:26:32.89:0,33,697	1/1:5,22:28:75.21:1065,75,0	1/1:13,2:15:24.08:384,24,0	1/1:1,10:11:6.02:90,6,0
chr10	53919298	.	GCGCGCA	G	1702.24	PASS	AB=0.994;AC=24;AF=0.429;AN=56;BaseQRankSum=8.301;DP=614;FS=36.333;HRun=0;HaplotypeScore=159.0149;InbreedingCoeff=0.3586;MQ=55.87;MQ0=8;MQRankSum=-0.971;QD=5.32;ReadPosRankSum=-1.206;VQSLOD=1.2635;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:79.53:0,80,2176	1/1:9,0:9:3.72:31,4,0	0/0:14,0:2:6.02:0,6,122	0/0:17,0:4:9:0,9,183	0/1:20,0:20:18.46:18,0,818	1/1:14,1:15:2.04:7,2,0	1/1:29,0:29:6.11:19,6,0	0/1:28,1:27:46.85:137,0,47	0/0:13,0:13:16.42:0,16,418	1/1:22,0:22:32.29:262,32,0	1/1:21,0:21:10.64:32,11,0	0/0:27,0:27:69.14:0,69,1944	0/0:16,0:15:45.13:0,45,1313	0/0:27,0:27:28.94:0,29,1170	0/0:17,0:17:1.04:0,1,147	0/0:15,0:14:0.92:0,1,72	0/1:27,0:27:99:301,0,156	0/1:17,0:16:99:153,0,209	0/1:12,0:12:63.75:122,0,64	0/1:22,0:22:55.41:57,0,55	1/1:46,0:45:4.07:13,4,0	0/0:18,0:18:48.51:0,49,1350	0/0:26,0:24:56.34:0,56,1598	0/0:41,0:41:93.19:0,93,2536	0/0:27,0:26:48.20:0,48,1149	1/1:25,1:26:22.08:637,22,0	1/1:9,5:14:9.77:55,10,0	1/1:11,0:11:5.05:42,5,0
chr10	53920688	.	TTG	T	1151.65	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=3.827;DP=662;FS=0.000;HRun=0;HaplotypeScore=133.5574;InbreedingCoeff=0.9919;MQ=74.17;MQ0=2;MQRankSum=-0.028;QD=12.00;ReadPosRankSum=2.158;VQSLOD=3.2658;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:84.17:0,84,1322	0/0:6,0:6:15.03:0,15,230	0/0:22,0:20:48.13:0,48,723	0/0:20,0:19:47.85:0,48,657	1/1:25,11:34:33.06:393,33,0	0/0:22,0:22:39.13:0,39,674	0/0:12,0:12:30.10:0,30,518	0/0:35,0:35:99:0,99,1700	1/1:8,13:20:29.93:374,30,0	0/0:40,0:40:99:0,105,1751	0/0:27,0:27:75.23:0,75,1219	0/0:27,0:27:69.20:0,69,1129	0/0:29,0:29:84.25:0,84,1392	1/1:10,5:15:18.05:225,18,0	0/0:22,0:22:60.16:0,60,956	0/0:19,0:19:51.16:0,51,856	0/0:16,0:16:38.12:0,38,562	0/0:24,0:24:51.03:0,51,813	0/0:10,0:10:27.09:0,27,466	0/0:33,0:33:51.16:0,51,835	0/0:18,0:18:36.12:0,36,609	0/0:23,0:23:60.19:0,60,1006	0/0:24,0:24:60.17:0,60,976	0/0:22,0:22:60.21:0,60,1038	1/1:11,13:23:24.08:320,24,0	0/0:32,0:32:90.27:0,90,1459	0/0:24,0:24:63.20:0,63,1045	0/0:17,0:17:33.09:0,33,520
chr10	53920698	.	A	ATCTATC	885.33	PASS	AB=0.972;AC=14;AF=0.250;AN=56;BaseQRankSum=10.347;DP=653;FS=0.468;HRun=0;HaplotypeScore=182.8773;InbreedingCoeff=0.2050;MQ=67.95;MQ0=5;MQRankSum=-0.881;QD=4.06;ReadPosRankSum=-0.727;VQSLOD=2.2439;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:36:73.75:0,74,1528	0/1:6,0:6:29.85:30,0,97	0/0:19,0:15:36.12:0,36,544	0/0:16,0:15:32.58:0,33,442	1/1:16,12:26:10.17:112,10,0	0/0:21,0:21:21.78:0,22,528	0/1:16,0:16:15.93:16,0,304	0/0:43,0:42:31.46:0,31,1447	0/1:15,3:20:26.69:160,0,27	0/0:36,0:36:99:0,108,1754	0/0:25,0:25:75.22:0,75,1164	0/0:23,0:23:66.20:0,66,1154	0/0:28,0:28:81.26:0,81,1565	1/1:7,6:16:14.24:75,14,0	0/0:20,0:20:60.18:0,60,1021	0/0:21,0:21:53.38:0,53,989	0/0:15,0:15:30.30:0,30,534	0/0:27,0:26:47.21:0,47,835	0/1:12,0:12:99:100,0,301	0/0:38,0:36:3.60:0,4,497	0/1:17,0:17:58.21:58,0,324	0/0:21,0:21:60.19:0,60,1094	0/0:20,0:20:57.17:0,57,1034	0/0:25,0:25:69.22:0,69,1361	1/1:16,11:25:25.91:164,26,0	0/1:31,0:31:99:113,0,838	0/1:27,0:26:99:125,0,639	0/1:14,0:14:99:103,0,349
chr10	53920740	.	ATC	A	752.17	PASS	AB=0.960;AC=12;AF=0.231;AN=52;BaseQRankSum=0.584;DP=617;FS=0.992;HRun=0;HaplotypeScore=159.4726;InbreedingCoeff=-0.0514;MQ=47.24;MQ0=51;MQRankSum=-5.004;QD=3.21;ReadPosRankSum=-3.622;VQSLOD=1.8507;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:32:55.72:0,56,746	0/1:8,0:8:23.61:24,0,47	./.	./.	0/0:30,0:26:21.04:0,21,254	0/1:14,0:14:12.87:13,0,22	0/1:21,1:19:30.28:30,0,128	0/1:20,24:41:60.26:475,0,60	0/0:23,0:22:44.29:0,44,585	1/1:28,0:26:31.74:244,32,0	0/1:17,0:17:24.71:25,0,52	0/0:20,0:20:35.99:0,36,449	0/0:22,0:22:58.89:0,59,739	0/0:17,0:17:12.03:0,12,156	0/1:20,0:20:3.73:4,0,419	0/1:23,0:22:18.35:18,0,343	0/1:12,0:10:1.09:1,0,189	0/1:22,0:20:0.72:1,0,260	0/1:24,0:15:58.97:59,0,93	0/0:40,0:36:17.01:0,17,121	0/0:12,0:10:14.15:0,14,104	0/0:17,0:17:35.44:0,35,424	0/0:15,0:15:40.01:0,40,461	0/0:34,0:34:79.46:0,79,796	0/0:31,0:29:21.47:0,21,123	0/0:25,0:24:17.10:0,17,284	0/0:31,1:31:2.62:0,3,213	0/0:9,1:8:10.70:0,11,64
chr10	53920742	.	C	CTATCTA	3642.01	PASS	AB=1.000;AC=24;AF=0.462;AN=52;BaseQRankSum=1.126;DP=614;FS=4.291;HRun=0;HaplotypeScore=202.7706;InbreedingCoeff=0.3461;MQ=47.04;MQ0=51;MQRankSum=-7.564;QD=10.06;ReadPosRankSum=-4.344;VQSLOD=1.9453;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:32:8.08:0,8,948	1/1:8,0:8:19.73:251,20,0	./.	./.	0/0:29,0:25:21.04:0,21,254	0/1:16,0:16:2.38:86,0,2	1/1:22,0:19:5.85:205,6,0	1/1:42,0:39:99:751,105,0	0/0:24,0:24:18.02:0,18,436	0/1:25,0:23:59.93:60,0,195	0/0:17,0:17:28.24:0,28,186	0/0:19,0:18:32.48:0,32,538	0/0:23,0:23:55.88:0,56,908	0/0:17,0:16:9.03:0,9,113	0/1:19,0:19:16.94:17,0,125	0/1:24,0:23:47.10:47,0,156	0/1:10,0:10:13.40:13,0,154	0/1:22,0:20:4.42:4,0,370	1/1:22,0:14:30.05:372,30,0	1/1:40,0:37:0.85:208,1,0	1/1:12,0:10:6.55:180,7,0	0/0:18,0:18:32.53:0,33,564	0/0:17,0:16:36.99:0,37,523	0/0:33,0:33:79.77:0,80,1121	0/1:29,0:27:13.53:14,0,68	1/1:9,11:24:32.06:708,32,0	0/1:33,0:32:28.64:415,0,29	1/1:4,0:8:15:311,15,0
chr10	53920744	.	A	ATC	1666.76	PASS	AB=0.965;AC=22;AF=0.423;AN=52;BaseQRankSum=5.150;DP=611;FS=3.387;HRun=0;HaplotypeScore=169.5555;InbreedingCoeff=-0.2618;MQ=46.83;MQ0=51;MQRankSum=-2.790;QD=3.75;ReadPosRankSum=-1.224;VQSLOD=2.6607;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:36,0:33:26.59:27,0,554	1/1:8,0:8:18.50:142,18,0	./.	./.	0/0:29,0:26:21.54:0,22,302	0/1:17,0:17:20.26:20,0,99	0/1:21,0:17:46.44:104,0,46	0/1:42,0:39:35.45:35,0,71	0/0:24,0:24:21.94:0,22,512	0/1:25,0:23:4.55:29,0,5	0/0:16,0:16:23.74:0,24,235	0/0:20,0:19:3.49:0,3,276	0/0:24,0:23:2.26:0,2,498	0/0:16,0:15:12.02:0,12,160	0/1:18,0:18:17.01:23,0,17	0/1:24,0:23:21.95:51,0,22	0/1:11,1:11:5.75:131,0,6	0/1:12,10:20:48.28:69,0,48	0/1:19,2:15:38.14:150,0,38	0/1:41,0:37:99:179,0,113	0/1:13,0:11:17.45:148,0,17	0/0:18,0:18:6.46:0,6,319	0/1:16,0:15:3.64:4,0,264	0/1:32,0:32:30.76:31,0,504	1/1:29,0:27:20.46:123,20,0	0/1:23,0:22:99:240,0,135	0/1:31,0:30:99:194,0,298	1/1:11,0:9:11.97:126,12,0
chr10	53920746	.	ATG	A	2506.83	PASS	AB=1.000;AC=29;AF=0.558;AN=52;BaseQRankSum=-2.870;DP=591;FS=0.000;HRun=0;HaplotypeScore=142.8746;InbreedingCoeff=0.3839;MQ=47.28;MQ0=52;MQRankSum=2.464;QD=6.16;ReadPosRankSum=-1.368;VQSLOD=2.6535;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:26,8:32:11.86:113,12,0	1/1:5,4:9:14.92:152,15,0	./.	./.	0/1:28,0:25:0.17:0,0,242	0/1:17,0:17:22.82:36,0,23	0/1:22,0:18:7.72:89,0,8	0/0:40,0:37:2.79:0,3,14	0/0:24,1:24:5.94:0,6,447	1/1:21,1:20:8.49:79,8,0	0/0:17,0:17:23.55:0,24,155	1/1:10,9:19:17.30:159,17,0	1/1:15,10:24:18.52:198,19,0	0/0:14,0:13:12.04:0,12,177	1/1:12,6:19:23.94:242,24,0	1/1:12,9:22:41.94:425,42,0	0/0:16,0:14:9.74:0,10,159	0/1:24,0:22:21.51:22,0,145	0/1:20,0:13:13.43:13,0,41	0/0:27,0:24:11.66:0,12,70	0/0:13,0:11:2.76:0,3,17	1/1:11,6:17:12.03:132,12,0	1/1:8,7:14:17.88:178,18,0	1/1:16,15:33:44.95:475,45,0	1/1:20,7:24:27.06:285,27,0	0/1:22,0:21:52.82:53,0,59	0/1:29,0:28:36.90:37,0,153	0/0:9,0:7:8.84:0,9,55
chr10	53921017	.	GA	G	1112.55	PASS	AB=0.952;AC=18;AF=0.321;AN=56;BaseQRankSum=18.511;DP=698;FS=3.972;HRun=2;HaplotypeScore=88.0867;InbreedingCoeff=0.7942;MQ=91.12;MQ0=0;MQRankSum=-2.967;QD=4.62;ReadPosRankSum=3.269;VQSLOD=0.9709;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,126,1596	0/0:10,0:10:26.98:0,27,374	0/0:27,0:27:81.17:0,81,1118	0/0:32,0:30:83.97:0,84,991	0/0:25,0:24:72.20:0,72,981	1/1:12,0:12:18.01:62,18,0	1/1:29,0:29:10.28:138,10,0	0/0:29,0:29:81.26:0,81,1178	0/0:21,0:21:60.20:0,60,895	1/1:33,1:34:39.05:151,39,0	0/1:13,1:14:18.05:63,0,18	0/0:28,0:28:84.24:0,84,1198	0/0:24,0:24:72.20:0,72,1001	0/0:24,0:24:72.16:0,72,1017	0/0:38,0:38:99:0,111,1613	0/0:32,0:32:96.31:0,96,1396	0/0:26,0:26:78.19:0,78,1081	0/0:11,0:11:27.09:0,27,403	1/1:14,1:15:0.04:72,0,0	1/1:31,2:33:17.16:223,17,0	0/1:31,1:32:7.86:163,0,8	0/0:30,0:30:90.26:0,90,1281	0/0:14,0:14:39.13:0,39,564	0/0:26,0:26:71.78:0,72,1055	0/0:18,0:18:48.12:0,48,652	1/1:35,1:36:37.88:193,38,0	1/1:24,0:24:19.49:123,19,0	1/1:11,1:12:27.40:124,27,0
chr10	53921019	.	AC	A	6938.74	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=13.116;DP=709;FS=3.949;HRun=6;HaplotypeScore=69.7312;InbreedingCoeff=0.9993;MQ=90.20;MQ0=0;MQRankSum=-3.198;QD=28.67;ReadPosRankSum=2.078;VQSLOD=5.7113;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,102,1292	0/0:10,0:10:27.07:0,27,339	0/0:27,0:27:75.09:0,75,897	0/0:31,0:29:71.65:0,72,827	0/0:24,0:23:65.95:0,66,785	1/1:0,12:12:27.07:290,27,0	1/1:3,27:30:81.20:870,81,0	0/0:30,0:30:81.22:0,81,1002	0/0:22,0:22:66.17:0,66,822	1/1:1,33:34:99:1055,99,0	1/1:4,11:15:25.20:330,25,0	0/0:29,0:29:84.25:0,84,1072	0/0:25,0:25:69.20:0,69,877	0/0:24,0:24:69.18:0,69,861	0/0:40,0:40:99:0,114,1442	0/0:33,0:33:96.26:0,96,1218	0/0:30,0:30:78.19:0,78,953	0/0:11,0:11:27.09:0,27,355	1/1:1,13:14:42.09:444,42,0	1/1:5,29:34:93.17:974,93,0	1/1:4,27:31:75.19:805,75,0	0/0:32,0:32:90.20:0,90,1118	0/0:13,0:13:39.10:0,39,482	0/0:25,1:26:36.98:0,37,836	0/0:18,0:18:48.15:0,48,616	1/1:2,34:36:99:1120,105,0	1/1:1,23:24:63.16:677,63,0	1/1:1,11:12:36.05:373,36,0
chr10	53921518	.	T	TA	2721.77	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-11.430;DP=596;FS=12.642;HRun=8;HaplotypeScore=59.3224;InbreedingCoeff=0.9427;MQ=69.93;MQ0=0;MQRankSum=1.383;QD=24.74;ReadPosRankSum=1.376;VQSLOD=3.5699;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:57:0,57,522	0/0:11,0:11:30.02:0,30,275	0/0:15,0:14:4.38:0,4,196	0/0:9,0:8:8.09:0,8,80	1/1:4,31:36:92.99:1010,93,0	0/0:18,0:18:54.03:0,54,494	0/0:15,0:15:36:0,36,324	0/0:37,0:37:99:0,100,901	1/1:4,17:21:45.13:519,45,0	0/0:29,0:29:78.03:0,78,714	0/0:16,0:16:48.03:0,48,439	0/0:15,0:15:45.02:0,45,412	0/0:23,0:23:57.02:0,57,522	1/1:5,16:21:37.35:418,37,0	0/0:19,0:19:44.99:0,45,404	0/0:21,0:21:51.02:0,51,466	0/0:4,0:35:59.59:0,60,193	0/0:1,0:19:34.63:0,35,102	0/0:20,0:20:42.01:0,42,384	0/0:25,0:25:66.03:0,66,604	0/0:10,0:10:27.01:0,27,247	0/0:20,0:20:51.02:0,51,466	0/0:19,0:19:57.03:0,57,522	0/0:8,0:8:24.01:0,24,220	1/1:3,29:32:81.24:935,81,0	0/0:29,0:29:69.02:0,69,628	0/0:32,0:32:78:0,78,708	0/0:15,0:15:42.02:0,42,384
chr10	53922350	.	GGGAACCCGTA	G	6337.42	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=12.085;DP=548;FS=2.919;HRun=0;HaplotypeScore=168.2374;InbreedingCoeff=0.9932;MQ=77.92;MQ0=0;MQRankSum=-12.002;QD=78.24;ReadPosRankSum=1.587;VQSLOD=5.1113;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:96.33:0,96,4772	0/0:10,0:10:30.08:0,30,1384	0/0:17,0:17:45.45:0,45,1881	0/0:11,0:11:28.79:0,29,1419	1/1:2,23:25:66.23:1937,66,0	0/0:38,0:38:99:0,114,5646	0/0:11,0:11:33.09:0,33,1366	0/0:34,0:34:93.31:0,93,4356	1/1:2,7:9:18.06:593,18,0	0/0:24,0:24:66.22:0,66,3020	0/0:19,0:19:57.18:0,57,2451	0/0:25,0:25:75.26:0,75,3812	0/0:23,0:23:69.24:0,69,3409	1/1:3,26:29:72.25:2370,72,0	0/0:25,0:25:72.25:0,72,3494	0/0:14,0:14:42.14:0,42,2111	0/0:27,0:27:78.23:0,78,3669	0/0:9,0:9:24.08:0,24,1121	0/0:20,0:20:54.19:0,54,2754	0/0:23,0:23:63.22:0,63,3061	0/0:15,0:15:39.13:0,39,1856	0/0:19,0:19:57.20:0,57,2846	0/0:7,0:7:21.07:0,21,1074	0/0:6,0:6:18.06:0,18,808	1/1:3,15:18:45.15:1438,45,0	0/0:22,0:22:63.21:0,63,2845	0/0:24,0:24:66.23:0,66,3347	0/0:10,0:10:30.10:0,30,1570
chr10	53922500	.	G	GA	1191.90	PASS	AB=1.000;AC=6;AF=0.107;AN=56;BaseQRankSum=1.435;DP=639;FS=1.772;HRun=9;HaplotypeScore=71.1201;InbreedingCoeff=0.6020;MQ=74.81;MQ0=0;MQRankSum=-0.786;QD=15.09;ReadPosRankSum=1.287;VQSLOD=3.9957;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,3:44:83.76:0,84,951	0/0:10,0:10:23.99:0,24,208	0/1:22,0:21:5.42:5,0,144	0/0:13,0:12:2.34:0,2,94	0/0:33,0:33:92.57:0,93,807	0/0:32,0:32:77.97:0,78,677	0/0:8,0:8:20.99:0,21,182	0/0:36,0:36:95.96:0,96,833	0/0:15,0:15:38.98:0,39,338	0/0:23,0:23:59.96:0,60,518	0/0:28,0:28:71.96:0,72,621	0/0:25,1:26:44.52:0,45,596	0/0:37,0:37:92.97:0,93,807	0/0:27,0:27:59.95:0,60,517	0/0:24,1:25:32.77:0,33,514	0/0:13,1:14:8.80:0,9,303	1/1:4,29:33:58.17:870,58,0	1/1:1,15:16:41.14:438,41,0	0/0:14,0:14:32.99:0,33,286	0/0:35,1:36:65.78:0,66,797	0/1:8,0:8:9.21:9,0,158	0/0:16,0:16:44.98:0,45,388	0/0:25,0:25:47.14:0,47,525	0/0:23,0:23:62.95:0,63,539	0/0:19,0:19:47.96:0,48,413	0/0:20,1:21:20.81:0,21,409	0/0:29,0:28:83.98:0,84,728	0/0:6,0:6:18:0,18,156
chr10	53923418	.	T	TTA	1510.86	PASS	AB=1.000;AC=11;AF=0.212;AN=52;BaseQRankSum=1.166;DP=297;FS=2.104;HRun=0;HaplotypeScore=43.6275;InbreedingCoeff=0.5558;MQ=70.02;MQ0=1;MQRankSum=-2.251;QD=14.96;ReadPosRankSum=-2.226;VQSLOD=2.9876;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:30.05:0,30,350	1/1:1,5:6:12.04:201,12,0	./.	0/0:9,0:7:2.21:0,2,34	0/0:20,0:20:57.17:0,57,709	0/0:13,0:13:7.33:0,7,113	0/0:3,0:3:0:0,0,0	1/1:40,0:40:96.11:947,96,0	0/0:3,0:3:3.01:0,3,38	0/0:6,0:6:11.20:0,11,81	0/0:11,0:11:14.86:0,15,186	0/0:6,0:6:15.05:0,15,191	0/0:7,0:7:15.05:0,15,191	0/0:11,0:11:27.07:0,27,329	1/1:2,8:10:21.07:351,21,0	1/1:5,5:10:9.03:151,9,0	0/0:16,0:16:45.14:0,45,572	0/0:6,0:5:15.05:0,15,189	0/1:12,0:12:1.29:1,0,53	0/0:6,0:6:2.82:0,3,37	0/0:11,0:11:3.29:0,3,39	0/0:8,0:8:8.39:0,8,84	0/0:9,0:9:18.06:0,18,228	./.	0/0:18,0:18:45.14:0,45,573	0/0:13,0:13:13.86:0,14,102	0/1:12,0:12:2.72:3,0,99	0/1:11,0:11:1.10:1,0,30
chr10	53925458	.	A	AG	1550.81	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-7.416;DP=797;FS=0.000;HRun=0;HaplotypeScore=77.3108;InbreedingCoeff=0.9992;MQ=89.73;MQ0=1;MQRankSum=-3.503;QD=40.81;ReadPosRankSum=-0.215;VQSLOD=3.9235;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,105,1451	0/0:10,0:10:30.10:0,30,420	0/0:31,0:30:84.60:0,85,1140	0/0:30,0:31:43.37:0,43,1121	0/0:31,0:31:93.31:0,93,1300	0/0:28,0:28:84.27:0,84,1159	0/0:28,0:28:84.27:0,84,1154	0/0:24,0:24:72.24:0,72,1007	0/0:25,0:25:72.21:0,72,986	0/0:35,0:35:99:0,102,1412	0/0:31,0:31:90.29:0,90,1242	0/0:37,0:37:99:0,111,1511	0/0:30,0:30:90.29:0,90,1238	0/0:50,0:50:99:0,150,2079	0/0:39,0:39:99:0,117,1619	0/0:29,0:29:87.26:0,87,1167	1/1:1,27:28:75.28:1242,75,0	1/1:0,10:10:27.09:430,27,0	0/0:21,0:21:63.21:0,63,880	0/0:32,0:32:96.32:0,96,1341	0/0:24,0:24:72.22:0,72,972	0/0:17,0:17:51.17:0,51,713	0/0:25,0:25:75.19:0,75,993	0/0:41,0:41:99:0,120,1621	0/0:28,0:28:84.27:0,84,1160	0/0:27,0:27:81.27:0,81,1133	0/0:33,0:33:99:0,99,1384	0/0:16,0:16:48.16:0,48,669
chr10	53926311	.	GCA	G	1203.71	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.958;DP=617;FS=17.177;HRun=0;HaplotypeScore=71.1932;InbreedingCoeff=0.9985;MQ=73.24;MQ0=0;MQRankSum=-1.578;QD=34.39;ReadPosRankSum=1.982;VQSLOD=4.6074;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,117,2171	0/0:15,0:15:45.15:0,45,842	0/0:31,0:24:72.12:0,72,1230	0/0:18,0:18:49.71:0,50,785	0/0:27,0:27:81.26:0,81,1477	0/0:24,0:24:69.22:0,69,1233	0/0:22,0:22:63.19:0,63,1108	0/0:36,0:36:99:0,105,1929	0/0:29,0:29:84.29:0,84,1573	0/0:25,0:25:75.24:0,75,1342	0/0:25,0:24:75.24:0,75,1359	0/0:15,0:15:42.13:0,42,754	0/0:22,0:22:66.23:0,66,1214	0/0:18,0:18:54.17:0,54,978	0/0:35,0:35:99:0,105,1903	0/0:16,0:16:45.14:0,45,810	1/1:0,23:23:60.20:883,60,0	1/1:0,12:12:30.10:442,30,0	0/0:22,0:22:54.14:0,54,966	0/0:28,0:28:81.28:0,81,1509	0/0:21,0:21:60.21:0,60,1114	0/0:12,0:12:36.12:0,36,674	0/0:22,0:22:66.23:0,66,1217	0/0:14,0:14:42.13:0,42,745	0/0:14,0:14:39.11:0,39,697	0/0:21,0:21:60.21:0,60,1124	0/0:21,0:21:60.19:0,60,1070	0/0:8,0:8:24.08:0,24,449
chr10	53928134	.	GGAA	G	138.79	PASS	AB=0.977;AC=12;AF=0.214;AN=56;BaseQRankSum=0.014;DP=578;FS=11.238;HRun=0;HaplotypeScore=127.0215;InbreedingCoeff=-0.1927;MQ=39.97;MQ0=28;MQRankSum=-6.181;QD=0.64;ReadPosRankSum=-3.508;VQSLOD=0.2424;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:56.78:0,57,771	0/1:7,0:6:8.05:8,0,67	0/0:19,0:1:2.97:0,3,20	0/0:24,0:4:4.54:0,5,28	0/1:28,0:27:69.41:69,0,164	0/0:23,0:21:29.08:0,29,521	0/0:21,0:21:21.39:0,21,407	0/1:31,0:21:10.33:10,0,197	0/0:15,0:13:19.86:0,20,143	0/1:33,0:28:43.30:43,0,379	0/1:22,0:19:24.91:25,0,378	0/0:22,0:21:47.98:0,48,770	0/0:23,0:23:58.04:0,58,1026	0/1:22,2:23:7.35:7,0,213	0/1:28,0:23:27.77:28,0,132	0/1:23,1:20:32.10:32,0,197	0/1:11,0:11:26.74:27,0,94	0/1:7,1:6:24.81:25,0,29	0/0:16,0:11:3.96:0,4,157	0/0:12,0:10:1.95:0,2,230	0/0:16,0:16:32.88:0,33,365	0/0:22,0:22:53.85:0,54,798	0/0:12,0:12:30:0,30,485	0/0:34,0:33:42.03:0,42,710	0/0:21,0:19:25.99:0,26,249	0/0:40,0:38:57.98:0,58,967	0/0:17,0:14:16.65:0,17,422	1/1:1,0:1:0.47:1,0,0
chr10	53928163	.	AGTAGCAG	A	408.32	PASS	AB=0.916;AC=13;AF=0.260;AN=50;BaseQRankSum=3.998;DP=336;FS=4.948;HRun=0;HaplotypeScore=118.0542;InbreedingCoeff=0.2551;MQ=53.96;MQ0=8;MQRankSum=-1.261;QD=5.37;ReadPosRankSum=-0.453;VQSLOD=2.0710;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:19:17.18:0,17,548	1/1:4,0:4:2.37:8,2,0	0/0:15,0:3:8.76:0,9,90	0/0:16,0:8:11.49:0,11,87	0/0:16,0:15:8.97:0,9,135	0/1:6,1:6:16.86:19,0,17	1/1:4,1:5:5.35:43,5,0	0/0:8,0:5:7.38:0,7,35	0/1:15,0:13:15.94:16,0,60	0/0:13,0:11:14.94:0,15,285	0/1:6,2:7:31.73:119,0,32	0/0:22,0:21:39.97:0,40,886	0/0:25,0:24:51.17:0,51,989	0/0:18,0:17:2.15:0,2,203	0/1:11,0:7:7.73:8,0,8	0/0:13,0:9:6.78:0,7,24	0/0:5,0:5:9.02:0,9,107	0/0:6,0:6:7.85:0,8,71	./.	1/1:3,0:1:2.94:18,3,0	./.	0/0:20,0:19:26.32:0,26,419	0/0:11,0:10:21.06:0,21,476	0/0:34,0:33:38.44:0,38,721	0/0:12,0:11:5.02:0,5,166	0/1:17,2:18:99:209,0,210	1/1:2,2:4:8.06:110,8,0	./.
chr10	53928173	.	A	AGAG	866.36	PASS	AB=0.960;AC=25;AF=0.500;AN=50;BaseQRankSum=3.888;DP=283;FS=5.094;HRun=0;HaplotypeScore=109.4695;InbreedingCoeff=0.2646;MQ=59.61;MQ0=9;MQRankSum=-3.268;QD=6.23;ReadPosRankSum=-3.775;VQSLOD=1.2005;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:20,0:19:13.36:13,0,157	1/1:1,0:1:3.01:36,3,0	0/1:13,0:3:2.21:9,0,2	0/0:21,0:9:8.37:0,8,80	0/1:12,0:11:44.63:61,0,45	1/1:3,0:2:3.85:22,4,0	0/1:5,0:5:6.46:6,0,7	1/1:3,0:1:2.99:23,3,0	1/1:10,5:13:24.03:372,24,0	1/1:7,0:6:2.99:24,3,0	1/1:6,0:5:11.49:64,11,0	0/0:24,0:22:43.58:0,44,411	0/0:28,0:27:41.58:0,42,378	0/1:12,4:15:4.97:232,0,5	1/1:7,0:5:3:25,3,0	1/1:6,0:4:2.85:19,3,0	0/0:3,0:3:2.92:0,3,17	0/0:3,0:3:2.99:0,3,30	./.	./.	0/0:2,0:2:0.47:0,0,1	0/0:17,0:16:17.63:0,18,148	0/0:14,0:13:23.90:0,24,208	0/0:31,0:30:33.46:0,33,385	0/1:10,1:10:23.77:61,0,24	0/1:11,0:11:3.54:48,0,4	1/1:3,0:3:0.83:2,1,0	./.
chr10	53928274	.	AAGAGGAGGTAGAGGAGGAACC	A	444.07	PASS	AB=1.000;AC=16;AF=0.364;AN=44;BaseQRankSum=5.156;DP=303;FS=22.315;HRun=0;HaplotypeScore=227.4140;InbreedingCoeff=0.2186;MQ=54.50;MQ0=8;MQRankSum=-5.922;QD=7.66;ReadPosRankSum=-3.330;VQSLOD=0.6533;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:78.04:0,78,2503	1/1:3,0:2:3.01:42,3,0	0/0:11,0:4:4.88:0,5,50	0/0:15,0:7:2.59:0,3,56	0/1:15,0:15:19.69:20,0,369	1/1:2,0:2:6.01:81,6,0	./.	0/0:4,0:3:2.88:0,3,15	0/1:7,0:7:26.94:27,0,122	1/1:6,0:6:15.70:156,16,0	1/1:5,0:5:7.27:86,7,0	0/0:22,0:21:45.15:0,45,1492	0/0:40,0:39:78.23:0,78,2058	0/0:11,0:11:11.12:0,11,449	./.	./.	0/1:3,0:3:29.21:29,0,77	0/1:3,0:3:9.44:9,0,101	./.	0/1:8,0:8:79.50:79,0,138	./.	0/0:29,0:29:60.10:0,60,1823	0/0:21,6:27:48.02:0,48,1450	0/0:29,0:28:59.79:0,60,1929	0/0:21,0:22:2.59:0,3,898	0/1:5,0:5:4.76:47,0,5	./.	1/1:1,0:1:2.84:14,3,0
chr10	53928289	.	AGGAACC	A	250.83	PASS	AB=1.000;AC=11;AF=0.250;AN=44;BaseQRankSum=3.792;DP=288;FS=4.780;HRun=0;HaplotypeScore=139.2994;InbreedingCoeff=0.3384;MQ=57.59;MQ0=6;MQRankSum=-4.979;QD=7.60;ReadPosRankSum=-3.162;VQSLOD=1.0695;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:19.39:0,19,1017	1/1:1,3:3:3.01:69,3,0	0/0:10,0:7:11:0,11,231	0/0:10,0:4:5.93:0,6,70	0/0:15,0:15:12.72:0,13,372	0/0:2,0:2:5.50:0,6,39	./.	1/1:5,0:3:2.84:14,3,0	0/0:5,0:5:6.02:0,6,131	1/1:4,2:6:9.92:126,10,0	1/1:4,1:5:8.64:49,9,0	0/0:28,0:26:54.67:0,55,801	0/0:36,0:34:37.61:0,38,929	0/0:14,0:14:20.95:0,21,361	./.	./.	0/1:2,0:2:14.98:15,0,56	0/1:3,0:3:46.54:47,0,109	./.	0/1:8,0:8:65.68:66,0,91	./.	0/0:27,0:27:59.95:0,60,967	0/0:22,0:22:10.60:0,11,543	0/0:26,0:26:45.15:0,45,843	0/0:22,0:22:1.83:0,2,785	0/0:4,0:3:2.96:0,3,29	./.	0/0:1,0:1:3.01:0,3,33
chr10	53928292	.	AACC	A	383.80	PASS	AB=0.971;AC=22;AF=0.500;AN=44;BaseQRankSum=-0.833;DP=286;FS=9.188;HRun=0;HaplotypeScore=129.5065;InbreedingCoeff=0.0004;MQ=58.24;MQ0=5;MQRankSum=-2.433;QD=2.38;ReadPosRankSum=-5.677;VQSLOD=-0.7444;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:29:7.79:8,0,362	1/1:3,1:3:2.99:24,3,0	0/0:9,0:7:7.32:0,7,225	0/1:9,0:4:8.31:8,0,69	0/1:17,0:17:48.64:49,0,159	1/1:1,1:2:5.95:58,6,0	./.	1/1:0,3:2:3.01:55,3,0	0/1:6,0:6:10.97:11,0,56	1/1:5,1:6:10.68:116,11,0	1/1:5,0:5:6.01:70,6,0	0/0:28,0:26:17.58:0,18,322	0/0:34,1:33:52.29:0,52,472	0/1:12,0:12:12:12,0,132	./.	./.	0/0:2,0:2:2.12:0,2,27	0/1:2,1:3:43.90:47,0,44	./.	0/1:8,0:8:26.37:26,0,55	./.	0/1:30,0:30:24.66:25,0,389	0/0:21,0:21:32.89:0,33,228	0/0:26,0:26:47.51:0,48,368	0/1:21,1:22:0.12:0,0,368	0/1:3,0:2:5.75:13,0,6	./.	1/1:1,0:1:1.25:3,1,0
chr10	53928305	.	GGAGGAA	G	234.34	PASS	AB=0.894;AC=5;AF=0.104;AN=48;BaseQRankSum=4.022;DP=365;FS=21.870;HRun=0;HaplotypeScore=132.6693;InbreedingCoeff=0.0076;MQ=52.63;MQ0=17;MQRankSum=-3.627;QD=5.86;ReadPosRankSum=1.232;VQSLOD=0.9470;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:84.19:0,84,2566	0/0:7,0:6:11.93:0,12,255	0/0:7,0:5:12.02:0,12,178	0/0:11,0:4:4.82:0,5,46	0/0:18,0:18:36.07:0,36,1074	0/0:3,0:3:7.13:0,7,52	0/0:6,0:5:1.25:0,1,3	0/0:16,0:10:19:0,19,470	0/0:9,0:9:21.07:0,21,617	0/1:11,2:12:99:113,0,162	0/1:7,1:7:2.28:131,0,2	0/0:33,0:30:63.22:0,63,1937	0/0:40,0:38:75.05:0,75,2102	0/0:18,0:18:19.57:0,20,1031	0/0:5,0:4:12.04:0,12,234	./.	0/0:1,0:1:3.01:0,3,74	0/1:4,0:4:13.88:14,0,95	./.	0/1:10,0:8:32.01:75,0,32	./.	0/0:34,0:34:87:0,87,2390	0/0:23,0:22:35.94:0,36,1123	0/0:30,0:30:66.18:0,66,2047	0/0:26,0:26:49.93:0,50,1390	0/1:3,2:3:10.98:11,0,41	./.	0/0:2,0:1:3.01:0,3,32
chr10	53928423	.	GAGA	G	147.52	PASS	AB=0.881;AC=7;AF=0.167;AN=42;BaseQRankSum=5.641;DP=367;FS=31.816;HRun=0;HaplotypeScore=73.2790;InbreedingCoeff=-0.0201;MQ=30.37;MQ0=30;MQRankSum=-3.283;QD=1.21;ReadPosRankSum=0.258;VQSLOD=0.0527;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,2:20:48.05:0,48,736	0/0:4,0:4:12.04:0,12,231	0/0:43,0:8:4.83:0,5,74	0/0:55,0:6:8.82:0,9,45	0/0:12,0:12:23.89:0,24,354	./.	./.	0/1:23,3:23:79.81:80,0,379	0/0:11,0:11:24.95:0,25,382	./.	./.	0/1:19,8:27:27.02:27,0,737	0/1:26,7:33:99:121,0,508	0/0:16,1:17:12.28:0,12,541	0/0:18,0:19:14.61:0,15,397	0/1:10,0:11:5.07:5,0,253	0/0:7,0:7:17.96:0,18,238	0/0:2,0:2:6:0,6,93	./.	1/1:3,1:2:2.94:18,3,0	./.	0/0:16,1:17:2.36:0,2,414	0/1:16,2:18:6.42:6,0,403	0/0:17,1:18:33.88:0,34,510	0/0:13,0:13:36.06:0,36,583	0/0:1,0:1:2.97:0,3,20	0/0:1,0:1:2.60:0,3,10	./.
chr10	53929657	.	G	GT	4871.91	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=7.042;DP=598;FS=4.032;HRun=12;HaplotypeScore=83.4145;InbreedingCoeff=0.9513;MQ=69.26;MQ0=2;MQRankSum=0.001;QD=11.30;ReadPosRankSum=0.761;VQSLOD=4.7121;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,1:24:26.38:0,26,346	1/1:1,4:5:11.97:107,12,0	0/0:15,0:14:20.08:0,20,136	0/0:14,0:11:5.88:0,6,43	1/1:36,0:33:62.42:283,62,0	1/1:3,0:27:59.76:303,60,0	1/1:3,0:11:14.20:71,14,0	1/1:8,17:26:10.08:397,10,0	1/1:14,0:14:27.50:123,27,0	1/1:4,1:28:40.55:310,41,0	1/1:3,2:23:48.82:273,49,0	0/0:19,0:19:49.25:0,49,353	0/0:33,1:34:61.82:0,62,605	1/1:25,0:25:41.32:186,41,0	1/1:4,25:29:56.93:540,57,0	1/1:3,19:22:42.07:409,42,0	1/1:3,1:12:19.58:108,20,0	1/1:5,1:15:22.92:129,23,0	1/1:14,2:31:47.07:308,47,0	1/1:9,13:30:58.30:383,58,0	1/1:3,0:8:8.52:43,9,0	0/0:26,1:27:19.47:0,19,384	0/0:24,0:24:46.45:0,46,371	0/0:9,0:10:27.90:0,28,183	1/1:25,0:25:46.66:208,47,0	1/1:5,0:25:46.49:276,46,0	1/1:3,2:26:45.49:242,45,0	1/1:1,3:13:28.74:172,29,0
chr10	53929659	.	T	TTTG	4242.04	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=-7.129;DP=601;FS=3.248;HRun=0;HaplotypeScore=108.6555;InbreedingCoeff=0.3443;MQ=68.24;MQ0=2;MQRankSum=-0.105;QD=16.51;ReadPosRankSum=3.669;VQSLOD=4.2536;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:65.58:0,66,952	0/0:5,0:5:9:0,9,45	0/0:15,0:14:28.46:0,28,385	0/0:12,0:9:11.99:0,12,140	1/1:3,34:34:86.94:1488,87,0	0/1:28,0:28:27.24:27,0,41	0/0:11,0:11:3.68:0,4,43	0/0:27,0:27:70.64:0,71,534	1/1:1,13:14:30.10:606,30,0	0/0:30,0:30:11.82:0,12,230	0/1:24,0:24:56.59:57,0,88	0/0:20,0:20:56.76:0,57,852	0/0:33,0:33:99:0,99,1541	1/1:2,24:27:44.24:904,44,0	0/0:30,0:30:57.78:0,58,350	0/0:21,0:21:46.72:0,47,286	0/0:11,0:11:9.41:0,9,73	0/1:16,0:16:2.93:3,0,48	0/0:31,0:31:7.74:0,8,284	0/1:28,0:28:6.86:7,0,231	0/1:7,0:7:12.78:72,0,13	0/0:27,0:27:79.38:0,79,1155	0/0:23,0:23:64.78:0,65,927	0/0:10,0:10:30.10:0,30,458	1/1:1,25:26:51.15:1036,51,0	0/1:25,0:25:21.57:22,0,72	0/1:25,0:25:20.23:20,0,56	0/0:14,0:14:8.54:0,9,78
chr10	53932422	.	T	TA	4202.44	PASS	AB=0.734;AC=30;AF=0.536;AN=56;BaseQRankSum=-6.781;DP=569;FS=6.276;HRun=14;HaplotypeScore=73.0518;InbreedingCoeff=0.6489;MQ=68.69;MQ0=3;MQRankSum=0.214;QD=11.30;ReadPosRankSum=0.379;VQSLOD=3.3380;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:24:28.86:0,29,306	0/0:1,0:13:22.41:0,22,65	0/1:29,0:15:14.66:23,0,15	0/0:11,0:6:3.81:0,4,24	1/1:11,19:32:21.20:402,21,0	1/1:6,11:20:19.30:260,19,0	1/1:4,14:18:13.73:244,14,0	0/0:12,0:37:47.29:0,47,139	1/1:3,11:14:26.99:237,27,0	1/1:6,17:23:15.45:380,15,0	0/1:13,15:30:29.01:241,0,29	0/0:14,1:16:11.06:0,11,190	0/0:15,0:15:35.44:0,35,231	1/1:4,13:17:26.99:236,27,0	0/0:1,0:14:20.36:0,20,59	0/0:7,0:18:20.34:0,20,59	1/1:5,1:33:56.97:295,57,0	1/1:4,1:16:3.78:92,4,0	1/1:8,12:20:9.09:290,9,0	1/1:6,25:32:59.74:500,60,0	1/1:1,7:8:18:158,18,0	0/0:15,1:17:31.24:0,31,188	0/0:20,0:20:32.38:0,32,211	0/0:11,0:11:27.83:0,28,175	0/1:4,14:19:5.70:192,0,6	0/1:11,6:17:27.30:146,0,27	1/1:7,18:26:6.56:283,7,0	1/1:5,11:16:12.08:222,12,0
chr10	53933479	.	GA	G	582.14	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.878;DP=647;FS=1.432;HRun=10;HaplotypeScore=65.2813;InbreedingCoeff=0.8989;MQ=79.34;MQ0=0;MQRankSum=-0.747;QD=17.12;ReadPosRankSum=2.565;VQSLOD=4.3613;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,111,1208	0/0:10,0:12:35.76:0,36,360	0/0:23,1:23:9.75:0,10,297	0/0:16,1:16:3.61:0,4,199	0/0:32,0:32:90.22:0,90,978	0/0:19,1:21:30.93:0,31,552	0/0:21,0:21:60.13:0,60,646	0/0:24,0:24:63.10:0,63,656	0/0:17,0:18:50.93:0,51,543	0/0:27,1:28:49.15:0,49,770	0/0:34,0:34:93.22:0,93,1012	0/0:31,0:31:87.14:0,87,938	0/0:25,0:25:69.15:0,69,741	0/0:18,0:18:54.15:0,54,597	0/0:20,0:20:54.15:0,54,597	0/0:24,0:24:69.15:0,69,733	1/1:3,21:24:53.98:469,54,0	1/1:0,10:10:26.99:234,27,0	0/0:20,0:20:47.96:0,48,512	0/0:26,0:26:69.18:0,69,755	0/0:15,0:15:42.07:0,42,443	0/0:31,0:32:81.05:0,81,876	0/0:23,1:24:40.10:0,40,656	0/0:20,0:20:57.13:0,57,621	0/0:22,1:24:36.94:0,37,610	0/0:18,0:18:39.11:0,39,431	0/0:40,0:40:99:0,105,1131	0/0:7,0:7:21.06:0,21,232
chr10	53936160	.	GT	G	11836.63	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=10.349;DP=788;FS=4.602;HRun=10;HaplotypeScore=82.2135;InbreedingCoeff=0.9979;MQ=72.48;MQ0=0;MQRankSum=-2.212;QD=20.80;ReadPosRankSum=1.859;VQSLOD=5.8446;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:96.24:0,96,1053	1/1:3,10:13:26.99:234,27,0	0/0:17,0:17:20.83:0,21,245	0/0:15,0:14:29.76:0,30,283	1/1:1,24:25:68.98:599,69,0	1/1:0,16:16:38.98:339,39,0	1/1:3,27:30:50.80:670,51,0	1/1:3,32:35:89.81:754,90,0	1/1:0,21:21:56.99:495,57,0	1/1:1,26:27:71.93:618,72,0	1/1:4,25:29:65.91:573,66,0	0/0:35,1:36:70.18:0,70,984	0/0:40,0:40:99:0,111,1220	1/1:3,36:39:98.98:859,99,0	1/1:6,30:36:53.79:696,54,0	1/1:3,32:35:80.96:703,81,0	1/1:3,29:32:20.40:560,20,0	1/1:0,22:22:56.95:488,57,0	1/1:5,16:21:44.96:390,45,0	1/1:11,25:36:44.74:618,45,0	1/1:2,30:32:86.98:755,87,0	0/0:30,0:30:48.67:0,49,740	0/0:23,1:24:43.11:0,43,690	0/0:22,0:22:63.62:0,64,688	1/1:0,30:30:77.98:677,78,0	1/1:6,31:37:92.91:800,93,0	1/1:7,37:44:65.78:800,66,0	1/1:1,8:9:23.99:208,24,0
chr10	53938954	.	CTGTGTGTGTGTGTGTGTGTGTGTGTG	C	2629.61	PASS	AB=1.000;AC=18;AF=0.321;AN=56;BaseQRankSum=4.462;DP=572;FS=6.646;HRun=0;HaplotypeScore=300.4196;InbreedingCoeff=0.7128;MQ=65.51;MQ0=35;MQRankSum=-1.732;QD=12.17;ReadPosRankSum=-0.324;VQSLOD=1.4427;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:30.10:0,30,1495	0/0:7,0:7:15:0,15,200	0/0:30,0:17:5.84:0,6,34	0/1:35,0:21:2.48:2,0,75	0/0:23,0:22:21.07:0,21,771	1/1:19,0:19:3.01:139,3,0	0/1:21,0:20:99:338,0,126	0/0:35,0:33:13.74:0,14,193	0/0:13,0:11:18.02:0,18,610	1/1:14,8:19:20.96:438,21,0	0/0:4,8:12:2.96:0,3,19	0/0:23,0:22:24.08:0,24,1082	0/0:8,0:9:18.04:0,18,506	0/0:8,0:8:12.02:0,12,432	0/0:9,0:14:11.40:0,11,293	0/0:16,0:14:30:0,30,718	0/0:25,0:26:30.57:0,31,1546	0/0:19,0:14:21.07:0,21,871	1/1:16,5:19:17.97:339,18,0	1/1:29,0:27:12.04:423,12,0	1/1:28,0:25:5.99:111,6,0	0/0:22,0:21:27.96:0,28,899	0/0:22,0:22:33.08:0,33,1037	0/0:26,0:26:27.09:0,27,1655	0/0:17,0:17:24.08:0,24,1062	1/1:14,5:18:15.02:317,15,0	1/1:13,0:12:15.05:522,15,0	1/1:9,0:9:3.01:188,3,0
chr10	53938980	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTC	G	2886.57	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=4.016;DP=528;FS=0.665;HRun=0;HaplotypeScore=244.8009;InbreedingCoeff=0.7411;MQ=46.00;MQ0=73;MQRankSum=-2.042;QD=19.24;ReadPosRankSum=-0.044;VQSLOD=2.3861;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:24:37.07:0,37,2036	0/0:13,0:12:18.49:0,18,461	0/0:10,0:2:5.84:0,6,34	0/0:12,0:4:2.07:0,2,79	0/0:24,0:17:21.07:0,21,818	1/1:3,14:17:3.01:176,3,0	0/1:21,0:17:99:338,0,158	0/0:15,0:11:23.67:0,24,325	0/0:19,0:15:23.70:0,24,954	1/1:16,0:13:20.90:438,21,0	0/0:12,0:12:2.96:0,3,19	0/0:25,0:22:33.11:0,33,1476	0/0:16,0:15:35.13:0,35,1685	0/0:10,0:8:15.03:0,15,731	0/0:10,0:10:10.75:0,11,369	0/0:20,0:17:39.05:0,39,1388	0/0:33,0:32:64.21:0,64,3281	0/0:20,0:14:24.08:0,24,1220	1/1:11,0:9:20.88:355,21,0	1/1:5,21:24:12.04:481,12,0	1/1:28,0:16:5.99:111,6,0	0/0:24,0:21:37:0,37,1502	0/0:22,0:22:33.08:0,33,1139	0/0:39,0:32:43.84:0,44,2968	0/0:23,0:22:24.08:0,24,1165	1/1:10,0:8:15.02:317,15,0	1/1:5,3:7:15.05:619,15,0	1/1:5,8:10:3.01:238,3,0
chr10	53939006	.	G	GTC	530.30	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=-1.398;DP=497;FS=24.564;HRun=0;HaplotypeScore=100.4564;InbreedingCoeff=0.4391;MQ=45.26;MQ0=65;MQRankSum=1.927;QD=2.82;ReadPosRankSum=-1.619;VQSLOD=0.3027;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:22:1.59:0,2,124	0/0:12,0:11:16.15:0,16,97	0/0:4,0:2:3.01:0,3,30	0/0:10,0:7:14.75:0,15,119	0/1:13,0:8:17.99:18,0,19	1/1:14,0:14:3.01:30,3,0	0/0:28,0:24:32.34:0,32,271	1/1:15,0:12:23.71:180,24,0	1/1:16,1:13:11.97:96,12,0	0/0:23,0:19:29.85:0,30,240	0/0:15,0:15:5.91:0,6,50	0/0:20,0:18:30.80:0,31,222	0/0:16,0:15:24.88:0,25,223	1/1:15,0:13:26.89:212,27,0	0/1:10,0:10:7.41:7,0,41	0/0:15,0:12:23.02:0,23,149	0/1:32,0:30:6.41:6,0,208	0/0:26,0:21:23.59:0,24,169	0/0:13,0:11:13.52:0,14,100	1/1:25,0:23:3.01:31,3,0	0/0:19,0:8:0:0,0,1	0/0:13,0:11:11.86:0,12,94	0/1:14,0:14:7.92:8,0,153	0/0:41,1:35:25.28:0,25,432	1/1:6,11:15:6.02:106,6,0	0/0:16,0:15:23.78:0,24,174	0/1:16,0:15:0.28:0,0,158	0/0:11,0:8:2.84:0,3,14
chr10	53939022	.	CTG	C	828.31	PASS	AB=0.574;AC=3;AF=0.054;AN=56;BaseQRankSum=6.854;DP=479;FS=2.888;HRun=0;HaplotypeScore=90.5495;InbreedingCoeff=0.4463;MQ=51.80;MQ0=41;MQRankSum=-1.423;QD=15.63;ReadPosRankSum=1.201;VQSLOD=3.1909;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:18:36.10:0,36,578	0/0:10,0:10:23.57:0,24,380	0/0:13,0:9:27.09:0,27,415	0/0:18,0:15:42.12:0,42,642	0/0:10,0:5:12.01:0,12,180	0/0:14,0:14:12.04:0,12,170	0/0:34,0:31:52.67:0,53,460	0/0:18,0:17:51.13:0,51,842	0/0:16,0:14:26.88:0,27,416	0/0:18,0:15:35.21:0,35,275	0/0:12,0:12:5.79:0,6,36	0/0:13,0:12:30.02:0,30,492	0/0:15,0:14:30.57:0,31,571	0/0:16,0:14:36.12:0,36,641	0/0:12,0:12:17.58:0,18,237	0/0:11,0:10:24.08:0,24,386	0/1:7,20:25:29.28:615,0,29	1/1:5,21:23:21.07:317,21,0	0/0:11,0:11:23.80:0,24,213	0/0:21,0:21:3.01:0,3,43	0/0:18,0:10:6.89:0,7,62	0/0:10,0:10:17.20:0,17,323	0/0:16,0:16:39.12:0,39,647	0/0:43,0:39:88.67:0,89,1571	0/0:12,0:10:11.99:0,12,175	0/0:14,0:13:23.73:0,24,171	0/0:20,0:19:44.04:0,44,412	0/0:10,0:8:2.22:0,2,7
chr10	53940785	.	GT	G	5166.25	PASS	AB=0.923;AC=23;AF=0.411;AN=56;BaseQRankSum=3.456;DP=651;FS=0.000;HRun=11;HaplotypeScore=75.8441;InbreedingCoeff=0.9117;MQ=71.69;MQ0=0;MQRankSum=-0.191;QD=17.57;ReadPosRankSum=-0.283;VQSLOD=5.3893;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,105,1044	0/0:6,0:6:14.95:0,15,145	0/1:11,1:12:42.93:43,0,75	0/0:8,0:9:9.02:0,9,94	0/0:6,0:22:45.77:0,46,240	1/1:3,24:27:40.98:492,41,0	1/1:3,19:22:18.95:362,19,0	1/1:13,17:30:50.90:419,51,0	0/0:6,0:22:40.89:0,41,207	1/1:5,20:25:56.89:466,57,0	1/1:3,15:18:44.89:364,45,0	0/0:21,0:21:60.13:0,60,627	0/0:31,2:33:47.51:0,48,693	0/0:3,0:23:45.62:0,46,229	0/0:23,0:23:63.16:0,63,672	0/0:26,0:26:69.17:0,69,736	0/0:4,0:20:37.03:0,37,188	0/0:1,0:18:29.61:0,30,144	1/1:3,14:18:13.59:308,14,0	1/1:2,23:26:64.75:506,65,0	1/1:4,22:26:62.91:517,63,0	0/0:17,0:19:47.91:0,48,475	0/0:22,1:22:51.12:0,51,578	0/0:27,0:28:75:0,75,773	0/0:5,0:25:43.20:0,43,261	1/1:6,34:40:95.74:773,96,0	1/1:6,31:37:74.78:616,75,0	1/1:0,12:13:38:301,38,0
chr10	53941526	.	C	CTCTG	3680.37	PASS	AB=0.827;AC=15;AF=0.268;AN=56;BaseQRankSum=5.901;DP=702;FS=0.000;HRun=0;HaplotypeScore=147.0358;InbreedingCoeff=0.4711;MQ=50.54;MQ0=17;MQRankSum=-4.440;QD=16.88;ReadPosRankSum=1.322;VQSLOD=3.3099;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:41:72.22:0,72,1249	0/0:7,0:7:17.99:0,18,281	0/0:31,0:13:18.02:0,18,303	0/0:29,0:13:14.71:0,15,243	0/0:29,0:28:42.03:0,42,655	1/1:6,13:19:3.01:78,3,0	1/1:13,0:11:14.78:305,15,0	0/0:57,0:56:99:0,140,1560	0/0:20,0:20:51.16:0,51,820	0/1:29,5:29:25.79:1036,0,26	1/1:25,3:27:12.04:245,12,0	0/0:24,0:24:56.94:0,57,1015	0/0:22,0:22:54.12:0,54,885	0/0:18,0:18:37.39:0,37,558	0/0:26,0:25:60.18:0,60,1025	0/0:26,0:26:72.23:0,72,1257	0/0:21,0:20:32.40:0,32,413	0/0:17,0:17:36.53:0,37,372	0/1:12,6:16:92.80:351,0,93	0/1:26,2:27:5.22:165,0,5	0/1:18,0:15:17.92:141,0,18	0/0:20,0:18:39.12:0,39,668	0/0:22,0:22:57.18:0,57,968	0/0:40,0:39:96.43:0,96,1536	0/0:31,0:31:75.19:0,75,1086	1/1:12,12:20:2.03:674,2,0	0/1:7,17:24:3.40:299,0,3	1/1:3,7:9:2.48:389,2,0
chr10	53941530	.	GTC	G	1412.88	PASS	AB=0.914;AC=11;AF=0.196;AN=56;BaseQRankSum=4.947;DP=692;FS=0.000;HRun=0;HaplotypeScore=125.9624;InbreedingCoeff=0.2130;MQ=48.67;MQ0=19;MQRankSum=-1.716;QD=7.06;ReadPosRankSum=-2.387;VQSLOD=2.9449;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:41:72.33:0,72,1279	0/0:7,0:7:18.06:0,18,319	0/0:21,0:8:18.06:0,18,312	0/0:26,0:10:15.05:0,15,249	0/0:27,0:26:42.01:0,42,761	0/0:20,0:19:0.47:0,0,1	1/1:7,6:11:12.46:172,12,0	0/0:55,0:54:77.93:0,78,2175	0/0:20,0:19:51.17:0,51,931	0/1:23,12:30:99:473,0,108	1/1:22,6:27:11.96:169,12,0	0/0:22,0:22:57.20:0,57,1037	0/0:22,0:22:57.17:0,57,962	0/0:19,0:18:37.30:0,37,592	0/0:25,0:24:60.21:0,60,1080	0/0:25,0:25:72.23:0,72,1281	0/0:23,0:22:41.54:0,42,743	0/0:17,0:17:41.82:0,42,686	0/1:23,0:21:99:141,0,295	0/1:24,6:29:28.01:116,0,28	0/1:14,4:15:40.46:117,0,40	0/0:20,0:18:42.11:0,42,706	0/0:24,0:24:57.18:0,57,988	0/0:42,0:41:99:0,105,1730	0/0:32,0:32:75.23:0,75,1306	0/1:19,0:15:50.63:232,0,51	0/1:24,0:23:44.57:76,0,45	0/1:10,0:9:9.19:72,0,9
chr10	53941534	.	CTG	C	610.87	PASS	AB=0.990;AC=11;AF=0.196;AN=56;BaseQRankSum=7.973;DP=670;FS=0.530;HRun=0;HaplotypeScore=126.1656;InbreedingCoeff=0.0298;MQ=46.00;MQ0=19;MQRankSum=-5.308;QD=2.56;ReadPosRankSum=-6.012;VQSLOD=0.3342;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:38:40.17:0,40,1259	0/0:7,0:7:20.95:0,21,323	0/0:17,0:7:18:0,18,282	0/0:22,0:7:15.02:0,15,237	0/0:27,0:26:42:0,42,775	0/0:21,0:20:2.88:0,3,19	0/1:13,0:11:1.41:61,0,1	0/1:44,5:48:13.84:14,0,2008	0/0:21,0:20:52.99:0,53,961	0/1:34,0:29:94.94:244,0,95	1/1:27,0:26:11.69:70,12,0	0/0:24,0:24:59.55:0,60,1051	0/0:22,0:22:53.74:0,54,916	0/0:20,0:19:31.62:0,32,552	0/0:24,0:23:60.17:0,60,1070	0/0:27,0:27:69.21:0,69,1286	0/0:25,0:22:41.49:0,41,760	0/0:16,0:16:31.39:0,31,681	0/1:21,0:19:99:103,0,245	0/1:29,0:28:33.79:48,0,34	0/1:15,0:12:28.39:28,0,48	0/0:19,0:17:35.46:0,35,659	0/0:24,0:24:54.12:0,54,913	0/0:41,0:40:96.30:0,96,1703	0/0:32,0:32:69.18:0,69,1297	0/1:18,0:14:99:127,0,109	0/1:23,0:22:43.64:44,0,72	0/1:10,0:9:23.35:23,0,82
chr10	53941563	.	TCA	T	770.88	PASS	AB=0.985;AC=27;AF=0.675;AN=40;BaseQRankSum=-3.809;DP=571;FS=1.808;HRun=0;HaplotypeScore=133.6322;InbreedingCoeff=0.3686;MQ=42.98;MQ0=29;MQRankSum=1.059;QD=2.31;ReadPosRankSum=2.357;VQSLOD=2.0285;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:43,0:38:18.28:90,0,18	1/1:5,0:5:6:55,6,0	./.	./.	0/0:30,0:29:5.86:0,6,48	0/1:20,0:20:0:0,0,0	0/0:11,0:8:2.96:0,3,19	./.	0/0:23,0:22:10.80:0,11,79	1/1:23,0:21:1.25:3,1,0	./.	1/1:21,1:22:3.11:107,3,0	1/1:14,8:22:3.01:31,3,0	./.	1/1:10,6:15:3:32,3,0	1/1:30,0:29:17.96:145,18,0	1/1:23,0:20:0.47:1,0,0	1/1:16,0:16:2.84:14,3,0	./.	./.	./.	1/1:24,0:21:1.43:86,1,0	0/1:17,0:17:0:0,0,0	1/1:36,6:39:30.45:286,30,0	0/0:30,0:29:11.99:0,12,100	1/1:12,0:9:2.84:14,3,0	1/1:13,0:14:2.13:24,2,0	0/0:11,0:11:0:0,0,0
chr10	53941748	.	G	GAA	1638.30	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-6.907;DP=489;FS=0.607;HRun=9;HaplotypeScore=55.4219;InbreedingCoeff=0.9911;MQ=71.08;MQ0=0;MQRankSum=-0.257;QD=28.25;ReadPosRankSum=1.903;VQSLOD=3.4772;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:66.12:0,66,693	0/0:15,0:15:39.09:0,39,415	0/0:11,0:11:23.95:0,24,238	0/0:10,0:9:14.99:0,15,150	1/1:6,10:16:27.09:408,27,0	0/0:21,0:21:54.10:0,54,566	0/0:8,0:8:18.04:0,18,192	0/0:28,0:28:45.90:0,46,677	1/1:1,12:13:36.12:551,36,0	0/0:20,0:20:54.05:0,54,556	0/0:23,0:23:66.15:0,66,702	0/0:15,0:15:33.04:0,33,343	0/0:17,0:17:48.12:0,48,511	1/1:2,13:15:30.10:461,30,0	0/0:17,0:17:33.05:0,33,351	0/0:22,0:22:53.81:0,54,557	0/0:21,0:21:57.10:0,57,598	0/0:12,0:12:33.08:0,33,351	0/0:15,0:15:42.10:0,42,447	0/0:26,0:26:72.13:0,72,759	0/0:20,0:20:57.12:0,57,598	0/0:14,0:14:39.08:0,39,407	0/0:22,0:22:63.15:0,63,671	0/0:12,0:12:24.05:0,24,255	1/1:1,12:14:26.58:378,27,0	0/0:22,0:22:60.05:0,60,606	0/0:19,0:19:54.09:0,54,561	0/0:16,0:16:42.08:0,42,447
chr10	53942233	.	T	TA	2716.28	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.533;DP=740;FS=5.610;HRun=6;HaplotypeScore=86.1238;InbreedingCoeff=0.9985;MQ=76.29;MQ0=0;MQRankSum=-1.247;QD=30.52;ReadPosRankSum=-0.186;VQSLOD=3.9127;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:90.21:0,90,918	0/0:8,0:8:21.05:0,21,214	0/0:26,0:26:69.10:0,69,687	0/0:16,0:16:38.44:0,38,372	0/0:41,0:41:99:0,114,1156	0/0:34,0:34:96.20:0,96,972	0/0:13,0:13:36.08:0,36,367	1/1:4,31:35:90.29:1131,90,0	0/0:28,0:28:76.05:0,76,767	0/0:29,0:29:81.18:0,81,822	0/0:27,0:27:66.11:0,66,659	0/0:30,0:30:87.17:0,87,874	0/0:30,0:30:87.18:0,87,880	0/0:20,0:20:51.10:0,51,514	0/0:23,0:23:60.13:0,60,612	0/0:31,0:31:90.16:0,90,903	1/1:5,21:26:66.17:805,66,0	1/1:3,25:28:57.75:923,58,0	0/0:26,0:26:69.13:0,69,691	0/0:42,0:42:99:0,123,1248	0/0:25,0:25:72.11:0,72,718	0/0:26,0:26:63.14:0,63,643	0/0:35,0:35:96.20:0,96,973	0/0:22,0:22:60.14:0,60,612	0/0:26,0:26:57.10:0,57,575	0/0:26,0:26:72.16:0,72,735	0/0:22,0:22:57.13:0,57,582	0/0:15,0:15:45.10:0,45,459
chr10	53944761	.	T	TTTTC	574.17	PASS	AB=0.911;AC=8;AF=0.143;AN=56;BaseQRankSum=0.428;DP=587;FS=2.819;HRun=0;HaplotypeScore=115.1905;InbreedingCoeff=0.4205;MQ=57.08;MQ0=29;MQRankSum=-2.900;QD=3.59;ReadPosRankSum=-0.942;VQSLOD=2.3110;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:46.20:0,46,447	0/0:9,0:8:4.31:0,4,183	0/1:33,0:10:2.49:2,0,23	0/1:42,0:11:3.40:3,0,20	1/1:31,0:31:10.67:321,11,0	0/0:19,0:19:15.68:0,16,256	0/0:17,0:16:30.84:0,31,363	0/0:26,0:25:9.81:0,10,150	0/1:24,0:19:26.57:127,0,27	0/0:26,0:25:67.60:0,68,568	0/0:25,0:23:21.22:0,21,395	0/0:19,0:18:46.04:0,46,356	0/0:21,0:20:43.93:0,44,398	1/1:11,1:11:22.24:211,22,0	0/0:21,0:21:37.81:0,38,451	0/0:19,0:19:41.28:0,41,377	0/0:27,0:25:65.33:0,65,737	0/0:15,0:15:26.84:0,27,287	0/0:17,0:17:42.18:0,42,447	0/0:27,0:26:40.90:0,41,454	0/0:7,0:7:8.99:0,9,115	0/0:9,0:9:17.95:0,18,152	0/0:18,0:17:27.47:0,27,324	0/0:16,0:14:29.03:0,29,342	0/1:8,9:16:14.37:43,0,14	0/0:22,0:22:53.67:0,54,457	0/0:28,0:27:47.23:0,47,429	0/0:16,0:16:29.01:0,29,272
chr10	53949690	.	T	TCCC	1589.31	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.200;DP=644;FS=8.372;HRun=1;HaplotypeScore=94.2882;InbreedingCoeff=0.9918;MQ=82.09;MQ0=0;MQRankSum=-7.207;QD=45.41;ReadPosRankSum=-3.766;VQSLOD=1.7506;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:75.26:0,75,1323	0/0:11,0:11:33.10:0,33,554	0/0:16,0:17:45.15:0,45,774	0/0:22,0:22:63.20:0,63,1074	0/0:27,0:27:78.24:0,78,1319	0/0:21,0:21:63.22:0,63,1102	0/0:25,0:25:72.23:0,72,1241	1/1:13,22:35:96.32:1684,96,0	0/0:20,0:20:60.19:0,60,1025	0/0:23,0:23:69.23:0,69,1189	0/0:24,0:24:63.22:0,63,1111	0/0:31,0:31:90.29:0,90,1553	0/0:28,0:28:81.28:0,81,1428	0/0:26,0:26:78.24:0,78,1314	0/0:23,0:23:66.23:0,66,1164	0/0:21,0:21:60.21:0,60,1058	0/0:18,0:18:48.12:0,48,840	0/0:25,0:25:69.21:0,69,1186	0/0:20,0:20:60.19:0,60,1005	0/0:20,0:20:60.21:0,60,1058	0/0:24,0:24:63.18:0,63,1055	0/0:24,0:24:66.23:0,66,1160	0/0:18,0:18:51.17:0,51,900	0/0:22,0:22:63.20:0,63,1082	0/0:23,0:23:69.24:0,69,1217	0/0:32,0:32:90.30:0,90,1562	0/0:32,0:32:96.27:0,96,1606	0/0:6,0:6:18.06:0,18,318
chr10	53949693	.	GAT	G	696.87	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.969;DP=628;FS=2.737;HRun=0;HaplotypeScore=80.8395;InbreedingCoeff=0.9918;MQ=84.53;MQ0=0;MQRankSum=-6.919;QD=26.80;ReadPosRankSum=-2.975;VQSLOD=3.7717;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:75.26:0,75,1524	0/0:11,0:11:33.11:0,33,670	0/0:17,0:17:51.17:0,51,965	0/0:26,0:26:78.27:0,78,1475	0/0:27,0:27:78.27:0,78,1572	0/0:21,0:21:60.21:0,60,1219	0/0:24,0:24:69.22:0,69,1365	1/1:2,24:26:72.18:792,72,0	0/0:20,0:20:60.21:0,60,1196	0/0:22,0:22:66.23:0,66,1340	0/0:24,0:24:66.23:0,66,1341	0/0:31,0:31:93.31:0,93,1841	0/0:29,0:29:84.29:0,84,1695	0/0:24,0:24:72.25:0,72,1447	0/0:22,0:22:66.23:0,66,1339	0/0:20,0:20:60.21:0,60,1218	0/0:18,0:18:50.88:0,51,997	0/0:25,0:25:75.26:0,75,1523	0/0:19,0:19:57.20:0,57,1150	0/0:20,0:20:60.18:0,60,1180	0/0:22,0:22:66.23:0,66,1328	0/0:23,0:23:66.23:0,66,1341	0/0:18,0:18:51.17:0,51,1023	0/0:21,0:21:63.17:0,63,1203	0/0:23,0:23:69.24:0,69,1387	0/0:32,0:32:96.32:0,96,1913	0/0:31,0:31:93.32:0,93,1868	0/0:6,0:6:18.06:0,18,347
chr10	53952095	.	GCATGCGGTTACTCATCCAA	G	8623.40	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=11.892;DP=646;FS=8.310;HRun=0;HaplotypeScore=304.2929;InbreedingCoeff=0.9758;MQ=77.90;MQ0=0;MQRankSum=-11.803;QD=74.99;ReadPosRankSum=5.103;VQSLOD=3.3441;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:90.31:0,90,7468	0/0:8,0:8:24.08:0,24,2180	0/0:17,0:17:45.15:0,45,2624	0/0:15,0:15:42.14:0,42,2378	1/1:0,12:12:21.07:1139,21,0	0/0:32,0:32:96.33:0,96,7236	0/0:22,0:22:60.21:0,60,5242	0/0:46,0:46:99:0,135,9277	1/1:2,20:22:39.13:2115,39,0	0/0:30,0:30:87.28:0,87,6504	0/0:12,0:12:33.11:0,33,2513	0/0:22,0:22:66.21:0,66,5661	0/0:26,0:26:75.26:0,75,5801	1/1:6,20:27:48.16:2603,48,0	0/0:35,0:35:99:0,99,8066	0/0:27,0:27:78.25:0,78,6376	1/1:5,17:22:21.07:1139,21,0	1/1:4,8:12:6.02:326,6,0	0/0:27,0:27:75.24:0,75,4619	0/0:24,0:24:69.24:0,69,4639	0/0:22,0:22:60.21:0,60,4688	0/0:28,0:28:84.29:0,84,6672	0/0:12,0:12:36.12:0,36,2702	0/0:31,0:31:90.29:0,90,7003	1/1:5,15:20:24.08:1301,24,0	0/0:29,0:29:87.29:0,87,6799	0/0:24,0:24:69.24:0,69,5864	0/0:11,0:11:33.11:0,33,2743
chr10	53952255	.	G	GTCA	6783.62	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=12.980;DP=596;FS=11.973;HRun=0;HaplotypeScore=95.1672;InbreedingCoeff=0.9997;MQ=92.66;MQ0=0;MQRankSum=-8.801;QD=54.27;ReadPosRankSum=2.861;VQSLOD=6.7276;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:81.25:0,81,1291	0/0:11,0:11:33.11:0,33,537	0/0:30,0:30:80.86:0,81,1235	0/0:24,0:24:60.02:0,60,845	1/1:3,25:32:78.27:1633,78,0	0/0:29,0:29:78.27:0,78,1270	0/0:20,0:20:51.17:0,51,811	0/0:35,0:35:96.31:0,96,1522	1/1:0,22:23:63.22:1371,63,0	0/0:30,0:30:84.25:0,84,1323	0/0:13,0:13:36.06:0,36,510	0/0:22,0:22:63.18:0,63,957	0/0:23,0:22:60.20:0,60,980	1/1:1,16:17:48.16:1070,48,0	0/0:16,0:16:48.16:0,48,784	0/0:14,0:14:42.14:0,42,686	1/1:1,16:17:36.12:800,36,0	1/1:3,11:14:30.10:670,30,0	0/0:23,0:23:66.21:0,66,1032	0/0:19,0:19:57.18:0,57,905	0/0:19,0:19:57.18:0,57,904	0/0:23,0:23:69.21:0,69,1079	0/0:18,0:18:51.17:0,51,807	0/0:20,0:20:57.19:0,57,929	1/1:0,22:22:57.19:1240,57,0	0/0:17,0:17:48.16:0,48,780	0/0:27,0:27:75.20:0,75,1171	0/0:10,0:10:30.10:0,30,489
chr10	53952426	.	TA	T	991.42	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=9.897;DP=390;FS=0.580;HRun=1;HaplotypeScore=117.7270;InbreedingCoeff=0.9604;MQ=67.75;MQ0=7;MQRankSum=-9.297;QD=15.02;ReadPosRankSum=-5.181;VQSLOD=1.5871;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:18:48.13:0,48,712	0/0:5,0:4:11.95:0,12,116	0/0:29,0:21:54.14:0,54,792	0/0:20,0:16:44.26:0,44,551	1/1:12,7:19:44.31:386,44,0	0/0:17,0:17:36.11:0,36,542	0/0:9,0:9:24.08:0,24,382	0/0:20,0:20:57.15:0,57,869	1/1:8,6:14:32.19:303,32,0	0/0:16,0:16:48.08:0,48,712	0/0:15,0:15:24.06:0,24,359	0/0:16,0:16:39.52:0,40,577	0/0:17,0:17:51.16:0,51,775	1/1:5,5:10:17.46:132,17,0	0/0:10,0:10:21.07:0,21,331	0/0:10,0:10:21.04:0,21,288	1/1:8,2:10:15.24:120,15,0	1/1:2,2:2:6.02:69,6,0	0/0:8,0:8:24.04:0,24,345	0/0:16,0:16:32.97:0,33,501	0/0:12,0:11:21.07:0,21,331	0/0:13,0:13:20.78:0,21,496	0/0:18,0:18:48.15:0,48,740	0/0:22,0:20:54.17:0,54,827	1/1:7,2:9:26.23:163,26,0	0/0:6,0:6:18.03:0,18,223	0/0:16,0:16:39:0,39,497	0/0:10,0:10:30.06:0,30,428
chr10	53952427	.	AGTGTGTGTGTGTGTGTGTGTGT	A	1824.05	PASS	AB=0.985;AC=22;AF=0.458;AN=48;BaseQRankSum=5.124;DP=390;FS=3.435;HRun=0;HaplotypeScore=244.7949;InbreedingCoeff=0.4286;MQ=64.83;MQ0=9;MQRankSum=-2.824;QD=11.92;ReadPosRankSum=2.683;VQSLOD=2.3125;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:17:30.57:0,31,2529	1/1:3,0:4:3.01:146,3,0	0/0:27,0:19:6.02:0,6,148	0/0:20,0:16:11.99:0,12,232	0/1:19,0:19:4.09:38,0,4	1/1:11,5:16:12.47:123,12,0	./.	0/0:20,0:20:39.05:0,39,1458	0/1:14,0:14:29.89:52,0,30	0/1:15,1:16:99:230,0,239	./.	0/0:17,0:18:28.32:0,28,1800	0/0:18,0:18:33.10:0,33,2259	0/1:10,0:10:39.93:40,0,64	./.	1/1:8,0:10:6.91:303,7,0	0/0:9,0:9:3.01:0,3,81	0/0:4,0:2:3.01:0,3,220	1/1:7,0:7:2.97:21,3,0	1/1:13,1:15:3:25,3,0	1/1:12,0:11:3.01:49,3,0	0/0:18,0:18:15.03:0,15,1153	0/0:19,0:18:18.04:0,18,1530	0/0:23,0:21:29.44:0,29,2221	./.	1/1:3,1:4:6.02:247,6,0	1/1:12,3:15:9.02:367,9,0	1/1:8,2:10:6.02:347,6,0
chr10	53952429	.	TGTGTGTGTGTG	T	1483.33	PASS	AB=0.952;AC=17;AF=0.304;AN=56;BaseQRankSum=9.448;DP=395;FS=0.656;HRun=0;HaplotypeScore=168.7788;InbreedingCoeff=0.3456;MQ=62.78;MQ0=13;MQRankSum=-8.818;QD=12.16;ReadPosRankSum=-1.177;VQSLOD=2.6013;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:20:45.62:0,46,1755	0/1:5,0:4:32.20:52,0,32	0/0:26,0:18:51.15:0,51,640	0/0:20,0:16:44.15:0,44,502	1/1:13,5:20:29.29:390,29,0	0/0:16,0:16:33.10:0,33,410	0/0:9,0:9:24.08:0,24,306	0/0:22,0:22:60.14:0,60,1044	1/1:10,5:15:28.10:518,28,0	0/1:15,0:15:21.87:22,0,599	0/0:16,0:14:21.05:0,21,254	0/0:19,0:19:39.76:0,40,1244	0/0:20,0:20:54.18:0,54,1590	1/1:5,3:10:4.54:194,5,0	0/0:9,0:9:21.05:0,21,253	0/1:8,0:8:99:114,0,100	1/1:7,0:9:7.22:72,7,0	0/1:2,0:2:12.31:12,0,89	0/0:6,0:6:18.06:0,18,226	0/0:15,0:15:29.99:0,30,382	0/0:11,0:10:18.06:0,18,228	0/0:19,0:18:36.12:0,36,947	0/0:20,0:18:45.15:0,45,1361	0/0:24,0:23:56.85:0,57,1817	1/1:7,2:9:6.73:27,7,0	0/1:4,0:4:51.73:52,0,94	0/1:13,0:13:99:103,0,205	0/1:9,0:9:99:106,0,240
chr10	53952498	.	GA	G	964.66	PASS	AB=0.792;AC=18;AF=0.321;AN=56;BaseQRankSum=9.317;DP=556;FS=5.803;HRun=2;HaplotypeScore=118.9222;InbreedingCoeff=0.2030;MQ=40.47;MQ0=43;MQRankSum=-8.133;QD=5.08;ReadPosRankSum=1.026;VQSLOD=0.6275;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:39.13:0,39,564	0/1:3,4:7:20.32:20,0,71	0/0:48,0:6:11.87:0,12,144	0/0:62,0:16:28.51:0,29,390	1/1:13,3:10:5.31:32,5,0	0/0:32,3:34:32.63:0,33,350	0/0:9,9:17:5.77:0,6,62	0/0:17,0:13:33.10:0,33,456	1/1:10,1:11:0.26:77,0,0	0/1:20,8:25:99:184,0,568	0/0:14,12:23:14.46:0,14,159	0/0:17,0:16:43.70:0,44,608	0/0:20,0:19:53.97:0,54,650	1/1:8,3:9:4.93:88,5,0	0/0:22,2:21:29.65:0,30,321	0/1:18,8:21:41.42:41,0,267	0/1:7,0:6:32.22:32,0,38	1/1:4,0:2:3.45:22,3,0	0/1:14,2:15:64.27:64,0,456	0/0:16,6:20:14.83:0,15,196	0/0:5,2:6:8.98:0,9,91	0/0:14,0:11:33.11:0,33,479	0/0:13,0:12:33.11:0,33,469	0/0:26,0:25:62.17:0,62,834	0/1:10,4:12:4.09:85,0,4	0/1:16,5:19:99:197,0,293	0/1:13,11:21:99:173,0,345	1/1:1,4:5:9.03:114,9,0
chr10	53952499	.	A	AG	1167.17	PASS	AB=0.935;AC=19;AF=0.339;AN=56;BaseQRankSum=9.766;DP=560;FS=5.775;HRun=1;HaplotypeScore=117.4262;InbreedingCoeff=0.2829;MQ=40.57;MQ0=46;MQRankSum=-8.254;QD=6.11;ReadPosRankSum=0.674;VQSLOD=0.5109;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:39.13:0,39,532	0/1:7,0:7:20.43:20,0,71	0/0:48,0:6:11.86:0,12,138	0/0:62,0:16:32.31:0,32,383	1/1:15,0:9:5.37:45,5,0	0/0:17,17:33:32.81:0,33,336	0/0:15,3:17:2.44:0,2,39	0/0:19,0:15:33.10:0,33,437	1/1:9,2:11:0.33:90,0,0	0/1:26,1:24:99:210,0,484	0/0:22,4:22:14.37:0,14,160	0/0:17,0:16:44.88:0,45,583	0/0:20,0:19:53.93:0,54,623	1/1:12,0:10:4.81:103,5,0	0/0:20,4:21:26.12:0,26,299	0/1:24,3:22:48.96:49,0,205	1/1:6,1:6:6.14:47,6,0	1/1:3,1:2:3.45:23,3,0	0/1:14,2:15:91.24:91,0,412	0/0:19,3:20:14.98:0,15,178	0/0:7,0:6:8.98:0,9,86	0/0:14,0:11:33.11:0,33,455	0/0:16,0:13:33.11:0,33,448	0/0:26,0:25:63.09:0,63,800	0/1:16,0:14:4.09:99,0,4	0/1:16,4:17:99:246,0,276	0/1:23,1:21:99:189,0,320	1/1:5,0:4:11.40:125,11,0
chr10	53952500	.	AG	A	340.36	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=9.774;DP=563;FS=2.035;HRun=1;HaplotypeScore=118.4803;InbreedingCoeff=0.3120;MQ=40.57;MQ0=46;MQRankSum=-8.884;QD=2.28;ReadPosRankSum=-0.195;VQSLOD=-0.7494;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:43.94:0,44,625	0/1:7,0:7:3:3,0,87	0/0:48,0:6:14.66:0,15,177	0/0:62,0:16:28.15:0,28,437	1/1:16,0:10:4.62:19,5,0	0/0:34,0:33:39.20:0,39,512	0/0:18,0:17:5.81:0,6,91	0/0:20,0:16:38.33:0,38,579	1/1:10,1:11:9.60:66,10,0	0/1:27,0:24:47.07:47,0,629	0/0:26,0:22:14.42:0,14,213	0/0:17,0:16:45.13:0,45,692	0/0:20,0:19:54.17:0,54,784	1/1:10,2:10:14.64:120,15,0	0/0:24,0:21:38.55:0,39,491	0/0:27,0:22:8.72:0,9,440	0/1:7,0:6:20.65:21,0,52	0/1:4,0:2:4.10:4,0,8	0/0:16,0:15:0.40:0,0,530	0/0:22,0:20:20.45:0,20,273	0/0:7,0:6:9.03:0,9,129	0/0:14,0:11:33.11:0,33,527	0/0:16,0:13:36.11:0,36,551	0/0:27,0:26:60.20:0,60,928	1/1:15,1:14:8.88:66,9,0	0/1:20,0:17:58.19:58,0,341	0/1:24,0:21:52.50:53,0,459	0/1:5,0:4:6.38:46,0,6
chr10	53953210	.	GTT	G	3768.59	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=9.035;DP=574;FS=0.399;HRun=9;HaplotypeScore=76.0547;InbreedingCoeff=0.9911;MQ=66.71;MQ0=3;MQRankSum=-4.426;QD=25.81;ReadPosRankSum=3.902;VQSLOD=3.4794;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:69.24:0,69,1127	0/0:4,0:11:21.04:0,21,219	0/0:15,0:13:25.21:0,25,360	0/0:12,0:12:20.90:0,21,267	1/1:4,25:26:60.17:697,60,0	0/0:24,0:24:69.21:0,69,1052	0/0:14,0:15:45.15:0,45,709	0/0:30,0:30:75.25:0,75,1202	1/1:1,12:13:33.09:382,33,0	0/0:28,0:27:69.21:0,69,1063	0/0:27,0:27:59.99:0,60,938	0/0:24,0:24:66.19:0,66,1015	0/0:30,0:30:81.26:0,81,1268	1/1:1,21:22:48.14:559,48,0	0/0:1,0:22:60.10:0,60,580	0/0:0,0:14:33.05:0,33,320	1/1:3,22:24:54.16:629,54,0	1/1:3,21:24:56.30:662,56,0	0/0:19,0:19:42.14:0,42,689	0/0:22,0:22:66.18:0,66,991	0/0:10,0:10:24.08:0,24,393	0/0:21,0:21:51.17:0,51,835	0/0:13,0:13:30.08:0,30,443	0/0:12,0:12:36.09:0,36,562	1/1:2,31:33:72.21:839,72,0	0/0:21,0:21:63.22:0,63,1034	0/0:29,0:28:81.27:0,81,1292	0/0:4,0:4:12.04:0,12,197
chr10	53953640	.	A	ATG	7264.73	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=0.049;DP=750;FS=2.455;HRun=0;HaplotypeScore=94.7295;InbreedingCoeff=0.9931;MQ=73.58;MQ0=0;MQRankSum=-2.316;QD=38.44;ReadPosRankSum=0.728;VQSLOD=6.8344;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,123,1569	0/0:5,0:5:12.04:0,12,154	0/0:18,0:18:42.05:0,42,513	0/0:24,0:25:39.12:0,39,474	1/1:3,16:18:42.14:707,42,0	0/0:18,0:18:45.15:0,45,579	0/0:33,0:33:81.26:0,81,1041	0/0:16,0:16:42.14:0,42,541	1/1:3,33:36:90.31:1515,90,0	0/0:19,0:19:54.18:0,54,695	0/0:14,0:14:33.11:0,33,425	0/0:39,0:39:93.30:0,93,1196	0/0:36,0:36:96.30:0,96,1221	1/1:4,19:21:48.16:795,48,0	0/0:27,0:27:69.20:0,69,860	0/0:28,0:28:69.22:0,69,888	1/1:5,50:56:99:2225,132,0	1/1:4,21:25:60.21:1011,60,0	0/0:16,0:15:30.10:0,30,386	0/0:15,0:15:42.14:0,42,540	0/0:81,0:81:99:0,223,2824	0/0:17,0:17:42.14:0,42,539	0/0:8,0:8:24.08:0,24,309	0/0:34,0:34:84.26:0,84,1067	1/1:7,23:30:60.21:1011,60,0	0/0:32,0:32:81.26:0,81,1042	0/0:23,0:23:66.15:0,66,804	0/0:11,0:11:33.07:0,33,394
chr10	53954248	.	CT	C	4275.19	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=14.554;DP=683;FS=2.187;HRun=2;HaplotypeScore=77.1209;InbreedingCoeff=0.9996;MQ=87.36;MQ0=0;MQRankSum=-1.898;QD=34.76;ReadPosRankSum=4.984;VQSLOD=5.2472;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:72.22:0,72,1025	0/0:13,0:13:39.11:0,39,560	0/0:21,0:21:57.16:0,57,777	0/0:25,0:25:72.17:0,72,964	1/1:2,23:25:59.89:733,60,0	0/0:30,0:30:90.29:0,90,1324	0/0:28,0:28:84.25:0,84,1185	0/0:37,0:37:99:0,111,1577	1/1:0,18:18:51.17:662,51,0	0/0:29,0:29:81.27:0,81,1196	0/0:19,0:19:57.15:0,57,811	0/0:25,0:25:75.24:0,75,1102	0/0:29,0:29:84.26:0,84,1236	1/1:1,20:21:57.18:738,57,0	0/0:32,0:32:96.30:0,96,1401	0/0:20,2:22:24.26:0,24,861	1/1:0,20:20:51.17:662,51,0	1/1:0,19:19:57.19:740,57,0	0/0:19,0:19:54.17:0,54,791	0/0:33,0:33:99:0,99,1482	0/0:27,0:27:78.23:0,78,1127	0/0:27,0:27:81.27:0,81,1214	0/0:24,0:24:72.24:0,72,1079	0/0:22,0:22:66.21:0,66,968	1/1:0,20:20:57.19:740,57,0	0/0:17,0:17:51.17:0,51,765	0/0:30,0:29:90.30:0,90,1349	0/0:27,0:27:81.21:0,81,1129
chr10	53954806	.	CA	C	8280.79	PASS	AC=50;AF=1.000;AN=50;BaseQRankSum=-1.625;DP=516;FS=0.000;HRun=3;HaplotypeScore=39.7492;InbreedingCoeff=-0.0129;MQ=40.26;MQ0=4;MQRankSum=1.380;QD=16.90;ReadPosRankSum=1.717;VQSLOD=4.3933;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,24:26:63.18:768,63,0	1/1:1,4:3:9.02:99,9,0	./.	./.	1/1:4,23:19:51.14:617,51,0	1/1:1,13:3:6.02:74,6,0	1/1:6,26:11:21.07:260,21,0	./.	1/1:0,23:10:30.09:371,30,0	1/1:1,21:8:18.06:223,18,0	1/1:0,11:4:9.03:112,9,0	1/1:4,26:20:48.15:593,48,0	1/1:3,21:15:39.12:483,39,0	1/1:2,21:14:39.11:470,39,0	1/1:5,25:15:39.10:458,39,0	1/1:2,19:7:15.05:186,15,0	1/1:1,17:12:27.08:335,27,0	1/1:2,17:13:27.08:335,27,0	1/1:2,16:5:12.04:148,12,0	1/1:3,16:10:23.33:296,23,0	1/1:2,12:12:30.09:371,30,0	1/1:1,12:7:18.06:223,18,0	1/1:1,13:11:27.08:335,27,0	1/1:0,13:9:21.07:260,21,0	1/1:0,24:14:39.12:483,39,0	1/1:1,20:9:27.08:334,27,0	1/1:4,16:12:24.55:297,25,0	1/1:0,5:4:12.04:149,12,0
chr10	53954838	.	GA	G	6584.28	PASS	AC=52;AF=1.000;AN=52;BaseQRankSum=-1.594;DP=499;FS=0.000;HRun=2;HaplotypeScore=51.7710;InbreedingCoeff=-0.0297;MQ=31.54;MQ0=0;MQRankSum=0.177;QD=13.30;ReadPosRankSum=1.712;VQSLOD=3.7669;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,23:22:51.04:618,51,0	1/1:0,8:6:15.05:194,15,0	./.	./.	1/1:1,17:11:14.25:192,14,0	1/1:0,16:4:9.03:116,9,0	1/1:1,31:11:24.08:310,24,0	1/1:2,24:15:39.13:505,39,0	1/1:1,26:11:27.09:348,27,0	1/1:4,12:6:18:183,18,0	1/1:0,10:5:3.01:39,3,0	1/1:0,29:16:33.11:427,33,0	1/1:1,25:15:17.82:232,18,0	1/1:2,27:16:33.11:428,33,0	1/1:1,23:6:15.05:194,15,0	1/1:0,22:5:12.04:156,12,0	1/1:2,13:9:18.06:233,18,0	1/1:1,17:11:21.07:270,21,0	1/1:1,17:12:30.04:369,30,0	1/1:1,21:13:33.04:406,33,0	1/1:2,10:9:20.63:252,21,0	1/1:1,12:5:6.02:78,6,0	1/1:2,5:2:6:61,6,0	1/1:1,7:5:6.02:77,6,0	1/1:1,26:16:31.31:389,31,0	1/1:2,18:8:21.07:272,21,0	1/1:1,21:6:9.03:117,9,0	1/1:0,4:3:9.03:116,9,0
chr10	53955197	.	GT	G	9577.06	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=16.440;DP=622;FS=2.572;HRun=1;HaplotypeScore=72.2242;InbreedingCoeff=0.9994;MQ=87.66;MQ0=0;MQRankSum=-5.768;QD=36.55;ReadPosRankSum=2.582;VQSLOD=5.4036;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:60.17:0,60,889	1/1:0,7:7:21.07:293,21,0	0/0:24,0:25:67.91:0,68,1068	0/0:23,0:23:66.19:0,66,955	0/0:29,0:28:81.27:0,81,1229	1/1:0,31:31:87.29:1212,87,0	1/1:0,19:19:51.17:713,51,0	0/0:42,0:42:99:0,126,1833	0/0:27,0:27:78.25:0,78,1171	1/1:0,17:17:48.16:668,48,0	1/1:0,23:23:57.19:791,57,0	0/0:16,0:16:48.16:0,48,735	0/0:28,0:28:81.25:0,81,1214	0/0:15,0:15:45.15:0,45,686	1/1:0,20:20:48.16:671,48,0	1/1:0,23:23:63.21:873,63,0	0/0:30,0:30:90.26:0,90,1327	0/0:21,0:21:63.20:0,63,943	1/1:0,12:12:36.11:486,36,0	1/1:0,28:21:51.13:689,51,0	1/1:0,15:15:45.15:629,45,0	0/0:22,0:21:63.20:0,63,943	0/0:19,0:18:54.18:0,54,822	0/0:23,0:23:66.17:0,66,981	0/0:20,0:17:48.11:0,48,707	1/1:0,27:27:81.17:1066,81,0	1/1:0,27:27:75.22:1025,75,0	1/1:0,13:13:33.11:461,33,0
chr10	53955439	.	T	TCACACACACA	7475.87	PASS	AB=0.978;AC=37;AF=0.661;AN=56;BaseQRankSum=6.690;DP=559;FS=1.148;HRun=0;HaplotypeScore=204.9947;InbreedingCoeff=0.6074;MQ=65.27;MQ0=11;MQRankSum=-9.829;QD=20.43;ReadPosRankSum=-3.870;VQSLOD=3.5041;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:22:14.74:0,15,329	1/1:9,0:8:3.01:127,3,0	0/0:37,0:15:9.01:0,9,194	0/0:27,0:23:17.60:0,18,295	1/1:18,1:20:6.02:240,6,0	1/1:23,0:22:12.02:394,12,0	1/1:14,0:14:6.02:257,6,0	0/1:25,0:28:7.50:8,0,726	1/1:15,4:20:18:685,18,0	1/1:21,0:20:25.90:829,26,0	1/1:22,0:22:11.05:306,11,0	0/1:14,0:14:37.83:38,0,617	0/0:20,0:21:48.16:0,48,1404	1/1:10,1:12:3.01:147,3,0	1/1:23,0:21:21.05:705,21,0	1/1:21,0:20:17.76:653,18,0	0/0:20,0:21:7.11:0,7,844	0/1:16,0:17:35.71:36,0,658	1/1:13,0:12:10.82:202,11,0	1/1:21,0:20:8.98:366,9,0	1/1:12,0:12:1.78:22,2,0	0/0:22,0:24:48.15:0,48,1202	0/0:21,0:21:39.13:0,39,1133	0/0:18,0:20:21.07:0,21,561	1/1:11,2:18:14.91:589,15,0	1/1:15,0:14:15.05:425,15,0	1/1:32,0:29:28.90:935,29,0	1/1:8,0:8:11.91:513,12,0
chr10	53955463	.	A	ACACCC	3526.41	PASS	AB=0.940;AC=28;AF=0.500;AN=56;BaseQRankSum=12.553;DP=595;FS=14.823;HRun=0;HaplotypeScore=197.2661;InbreedingCoeff=0.5172;MQ=58.56;MQ0=22;MQRankSum=-12.132;QD=10.37;ReadPosRankSum=1.455;VQSLOD=2.0892;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:20:36.06:0,36,547	1/1:8,0:8:10.24:115,10,0	0/0:32,0:13:39.05:0,39,584	0/0:26,0:20:41.14:0,41,694	0/1:26,0:24:64.29:64,0,417	1/1:15,0:27:35.10:339,35,0	1/1:7,0:17:19.22:247,19,0	0/0:37,0:36:83.94:0,84,1424	0/1:20,0:19:76.23:76,0,87	1/1:13,0:21:37.01:377,37,0	1/1:19,0:27:16.35:199,16,0	0/0:21,0:21:57.18:0,57,1054	0/0:22,0:22:63.22:0,63,1254	0/1:12,0:12:85.37:85,0,111	0/1:12,0:18:18.85:191,0,19	1/1:9,0:18:37.66:451,38,0	0/0:24,0:25:55.82:0,56,916	0/0:19,0:19:48.07:0,48,803	1/1:9,0:15:1.32:218,1,0	1/1:14,0:28:11.57:143,12,0	0/1:11,0:10:17.34:38,0,17	0/0:21,0:21:54.18:0,54,1083	0/0:16,0:16:42.14:0,42,881	0/0:15,0:15:27.09:0,27,528	0/1:18,0:18:99:144,0,152	1/1:13,1:19:8.19:309,8,0	1/1:17,0:28:38.07:343,38,0	1/1:3,0:8:13.86:188,14,0
chr10	53955505	.	AT	A	5412.57	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=15.122;DP=457;FS=5.595;HRun=7;HaplotypeScore=112.3929;InbreedingCoeff=0.9821;MQ=66.70;MQ0=0;MQRankSum=-15.530;QD=27.47;ReadPosRankSum=-1.069;VQSLOD=3.8468;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:45.14:0,45,555	1/1:0,7:7:21.05:214,21,0	0/0:10,0:10:18.05:0,18,208	0/0:7,0:7:20.73:0,21,234	0/0:27,0:27:81.23:0,81,1002	1/1:3,22:25:66.14:670,66,0	1/1:2,7:9:21.05:214,21,0	0/0:30,0:30:75.22:0,75,921	0/0:14,0:14:39.12:0,39,479	1/1:2,16:18:48.11:489,48,0	1/1:4,14:18:45.09:451,45,0	0/0:18,0:18:51.16:0,51,640	0/0:23,0:23:63.20:0,63,793	0/0:11,0:11:30.05:0,30,360	1/1:0,11:11:33.07:330,33,0	1/1:0,13:13:39.09:397,39,0	0/0:19,0:19:57.18:0,57,717	0/0:20,0:20:57.18:0,57,716	1/1:7,11:18:27.02:383,27,0	1/1:1,24:25:69.15:700,69,0	1/1:1,2:3:6.01:61,6,0	0/0:15,0:15:45.14:0,45,566	0/0:11,0:11:30.10:0,30,373	0/0:12,0:12:33.11:0,33,415	0/0:25,0:25:60.19:0,60,754	1/1:0,16:16:48.11:489,48,0	1/1:1,25:26:77.76:770,78,0	1/1:0,8:8:24.05:242,24,0
chr10	53955532	.	A	ATTTTGGTT	23831.33	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=10.165;DP=506;FS=23.295;HRun=0;HaplotypeScore=148.2995;InbreedingCoeff=0.9751;MQ=71.05;MQ0=0;MQRankSum=-17.250;QD=105.92;ReadPosRankSum=-1.308;VQSLOD=3.7421;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:51.18:0,51,1437	1/1:0,11:13:33.11:1471,33,0	0/0:16,0:16:42.13:0,42,1130	0/0:10,0:10:27.08:0,27,622	0/0:27,0:27:78.27:0,78,2237	1/1:9,16:24:72.16:2739,72,0	1/1:6,6:12:33.08:1238,33,0	0/0:24,0:24:63.21:0,63,1663	0/0:16,0:16:39.13:0,39,1142	1/1:12,9:21:60.16:2403,60,0	1/1:8,13:22:57.15:2069,57,0	0/0:19,0:19:54.17:0,54,1458	0/0:28,0:28:69.24:0,69,1983	0/0:12,0:12:33.11:0,33,967	1/1:3,14:18:45.12:1918,45,0	1/1:3,11:13:36.12:1572,36,0	0/0:22,0:22:63.19:0,63,1730	0/0:22,0:22:60.17:0,60,1575	1/1:4,8:12:36.12:1443,36,0	1/1:11,19:30:87.29:3412,87,0	1/1:3,1:6:3.01:136,3,0	0/0:13,0:13:36.12:0,36,1027	0/0:13,0:13:39.13:0,39,1140	0/0:13,0:13:39.13:0,39,1086	0/0:28,0:28:72.25:0,72,2087	1/1:10,9:19:51.13:1775,51,0	1/1:9,14:24:69.24:2815,69,0	1/1:3,5:8:21.06:840,21,0
chr10	53956165	.	A	AG	11113.62	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=20.551;DP=694;FS=0.000;HRun=2;HaplotypeScore=132.4380;InbreedingCoeff=0.9998;MQ=84.00;MQ0=0;MQRankSum=-5.418;QD=37.80;ReadPosRankSum=1.626;VQSLOD=4.3272;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,105,1289	1/1:0,10:10:27.09:388,27,0	0/0:30,0:30:90.22:0,90,1042	0/0:20,0:20:45.14:0,45,558	0/0:26,0:26:72.23:0,72,891	1/1:3,15:18:42.14:604,42,0	1/1:2,13:15:36.12:518,36,0	0/0:47,0:47:99:0,135,1643	0/0:27,0:27:78.24:0,78,967	1/1:2,25:27:72.21:1008,72,0	1/1:2,17:19:54.18:776,54,0	0/0:23,0:23:69.17:0,69,838	0/0:32,0:32:90.28:0,90,1116	0/0:28,0:28:84.26:0,84,1041	1/1:2,25:27:75.25:1079,75,0	1/1:4,34:38:99:1505,105,0	0/0:19,0:19:57.16:0,57,693	0/0:11,0:11:33.04:0,33,377	1/1:4,22:25:66.22:949,66,0	1/1:5,28:33:84.28:1208,84,0	1/1:2,18:20:51.17:734,51,0	0/0:34,0:34:96.29:0,96,1177	0/0:23,0:23:69.20:0,69,843	0/0:25,0:25:75.24:0,75,929	0/0:17,0:17:51.16:0,51,632	1/1:5,22:27:75.22:1048,75,0	1/1:1,21:22:54.18:777,54,0	1/1:0,12:12:36.12:518,36,0
chr10	53956439	.	C	CT	10636.42	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=20.546;DP=706;FS=2.521;HRun=0;HaplotypeScore=148.1745;InbreedingCoeff=0.9994;MQ=91.45;MQ0=0;MQRankSum=-16.639;QD=38.12;ReadPosRankSum=2.199;VQSLOD=4.2987;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,105,1465	1/1:1,10:11:24.08:382,24,0	0/0:37,0:37:99:0,108,1465	0/0:29,0:29:78.21:0,78,1032	0/0:33,0:33:96.32:0,96,1341	1/1:1,14:15:39.13:622,39,0	1/1:2,27:29:63.21:1000,63,0	0/0:30,0:30:87.25:0,87,1194	0/0:25,0:25:69.23:0,69,961	1/1:0,19:19:51.17:814,51,0	1/1:1,16:17:33.11:526,33,0	0/0:30,0:30:90.24:0,90,1217	0/0:24,0:24:72.24:0,72,998	0/0:29,0:29:87.29:0,87,1211	1/1:3,40:43:99:1674,105,0	1/1:0,37:37:96.33:1531,96,0	0/0:23,0:23:69.23:0,69,964	0/0:12,0:12:30.10:0,30,419	1/1:1,15:16:42.14:664,42,0	1/1:1,13:14:30.10:478,30,0	1/1:2,17:19:36.12:574,36,0	0/0:31,0:31:90.28:0,90,1223	0/0:18,0:18:54.17:0,54,738	0/0:34,0:34:96.32:0,96,1339	0/0:34,0:34:96.29:0,96,1307	1/1:1,21:22:60.19:935,60,0	1/1:0,28:28:63.21:1005,63,0	1/1:0,9:9:27.09:431,27,0
chr10	53956615	.	GAC	G	12613	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=19.774;DP=775;FS=3.980;HRun=0;HaplotypeScore=134.4392;InbreedingCoeff=0.9988;MQ=81.66;MQ0=0;MQRankSum=-6.263;QD=34.84;ReadPosRankSum=-0.206;VQSLOD=6.7304;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:78.24:0,78,1312	1/1:0,12:12:30.10:406,30,0	0/0:21,0:21:57.19:0,57,925	0/0:27,0:27:60.19:0,60,967	0/0:36,0:36:99:0,102,1723	1/1:2,27:29:69.23:922,69,0	1/1:1,31:32:81.27:1090,81,0	0/0:45,0:45:99:0,120,2000	0/0:22,0:22:66.23:0,66,1157	1/1:1,28:29:87.28:1161,87,0	1/1:4,21:25:57.19:771,57,0	0/0:30,0:30:87.30:0,87,1525	0/0:34,0:34:99:0,99,1698	0/0:34,0:34:96.33:0,96,1681	1/1:3,43:46:99:1486,111,0	1/1:0,30:30:84.06:1096,84,0	0/0:13,0:13:36.12:0,36,631	0/0:7,0:7:18.06:0,18,315	1/1:1,17:18:51.16:676,51,0	1/1:2,31:33:90.30:1216,90,0	1/1:0,18:18:42.14:568,42,0	0/0:33,0:33:87.30:0,87,1519	0/0:24,0:24:72.25:0,72,1238	0/0:35,0:34:99:0,99,1700	0/0:24,0:24:63.20:0,63,1078	1/1:3,37:40:99:1443,108,0	1/1:1,36:37:96.32:1291,96,0	1/1:0,13:13:36.12:487,36,0
chr10	53956757	.	AC	A	2051.55	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=18.648;DP=679;FS=14.040;HRun=7;HaplotypeScore=159.1064;InbreedingCoeff=0.9955;MQ=85.83;MQ0=5;MQRankSum=-12.429;QD=6.98;ReadPosRankSum=3.006;VQSLOD=0.2090;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:66.21:0,66,827	1/1:14,0:14:27.97:113,28,0	0/0:31,0:31:74.94:0,75,854	0/0:25,0:25:58.57:0,59,679	0/0:29,0:29:81.25:0,81,1002	1/1:22,2:23:37.37:137,37,0	1/1:27,0:27:41.46:138,41,0	0/0:39,0:39:99:0,111,1372	0/0:18,0:18:48.15:0,48,602	1/1:16,2:18:38.97:228,39,0	1/1:13,3:15:21.78:77,22,0	0/0:35,0:35:93.27:0,93,1129	0/0:32,0:32:87.27:0,87,1080	0/0:25,0:25:69.22:0,69,863	1/1:32,0:31:57.69:277,58,0	1/1:20,0:20:56.57:283,57,0	0/0:14,0:14:39.12:0,39,489	0/0:6,0:6:18.06:0,18,226	1/1:20,3:23:42.77:267,43,0	1/1:17,1:18:34:125,34,0	1/1:26,0:24:20.68:82,21,0	0/0:30,0:30:72.22:0,72,891	0/0:22,0:22:63.20:0,63,783	0/0:26,0:26:69.17:0,69,837	0/0:27,0:27:63.20:0,63,791	1/1:31,2:31:72.30:311,72,0	1/1:27,0:25:46.06:180,46,0	1/1:16,0:14:15.06:64,15,0
chr10	53956763	.	C	CA	7041.70	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=19.286;DP=669;FS=6.440;HRun=0;HaplotypeScore=147.3669;InbreedingCoeff=0.9979;MQ=87.63;MQ0=5;MQRankSum=-13.840;QD=25.06;ReadPosRankSum=2.858;VQSLOD=4.9352;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:71.99:0,72,958	1/1:0,14:14:33.08:366,33,0	0/0:31,0:30:72.95:0,73,960	0/0:29,0:30:64.57:0,65,776	0/0:29,0:29:87.02:0,87,1112	1/1:7,17:23:51.05:523,51,0	1/1:1,24:25:57.04:561,57,0	0/0:43,0:43:99:0,126,1615	0/0:17,0:17:51.14:0,51,675	1/1:6,11:17:51.03:565,51,0	1/1:5,10:14:24.73:279,25,0	0/0:34,0:34:96.20:0,96,1245	0/0:32,0:32:93.28:0,93,1232	0/0:26,0:26:72.01:0,72,939	1/1:2,29:30:66.17:784,66,0	1/1:2,19:21:63.19:770,63,0	0/0:15,0:15:42.09:0,42,554	0/0:6,0:6:18.06:0,18,251	1/1:7,12:19:54.13:625,54,0	1/1:3,16:19:42.09:457,42,0	1/1:0,25:23:27:307,27,0	0/0:26,0:26:72.42:0,72,1003	0/0:23,0:23:66.20:0,66,895	0/0:25,0:25:72.21:0,72,947	0/0:23,0:23:59.96:0,60,875	1/1:5,28:31:84.19:962,84,0	1/1:2,25:25:54.14:605,54,0	1/1:1,10:9:21.06:238,21,0
chr10	53956767	.	A	ACT	9523.20	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=19.069;DP=670;FS=5.213;HRun=0;HaplotypeScore=149.0344;InbreedingCoeff=0.9981;MQ=84.25;MQ0=5;MQRankSum=-14.095;QD=32.84;ReadPosRankSum=2.102;VQSLOD=6.3567;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:74.38:0,74,1071	1/1:5,10:15:33.11:501,33,0	0/0:30,0:29:80.07:0,80,1054	0/0:27,0:27:65.01:0,65,834	0/0:28,0:28:78.23:0,78,1105	1/1:3,19:29:51.17:789,51,0	1/1:7,21:28:63.18:880,63,0	0/0:39,0:39:99:0,114,1649	0/0:19,0:19:51.13:0,51,691	1/1:4,10:17:41.97:654,42,0	1/1:3,11:20:27.09:401,27,0	0/0:32,0:32:87.26:0,87,1263	0/0:32,0:32:93.27:0,93,1352	0/0:27,0:27:73.42:0,73,978	1/1:6,22:27:69.22:1102,69,0	1/1:0,21:23:63.22:1047,63,0	0/0:16,0:16:48.08:0,48,620	0/0:6,0:6:18.06:0,18,263	1/1:4,13:17:45.04:655,45,0	1/1:4,12:17:51.12:678,51,0	1/1:6,16:20:33.01:436,33,0	0/0:26,0:26:75.25:0,75,1144	0/0:24,0:24:69.22:0,69,1030	0/0:23,0:23:69.22:0,69,1023	0/0:23,0:23:66.20:0,66,945	1/1:6,28:32:75.69:1219,76,0	1/1:10,16:25:57.14:827,57,0	1/1:3,8:9:21.07:334,21,0
chr10	53956995	.	A	AAC	7353.30	PASS	AB=0.858;AC=32;AF=0.571;AN=56;BaseQRankSum=-4.356;DP=599;FS=0.700;HRun=0;HaplotypeScore=107.4491;InbreedingCoeff=0.5579;MQ=66.79;MQ0=5;MQRankSum=3.137;QD=18.25;ReadPosRankSum=3.339;VQSLOD=4.6729;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:59.61:0,60,647	1/1:17,0:17:38.14:473,38,0	0/0:31,0:16:22.63:0,23,236	0/0:19,0:11:5.67:0,6,119	0/1:29,0:29:68.43:68,0,85	0/1:5,17:21:9.51:259,0,10	1/1:7,13:20:6.37:346,6,0	0/0:24,0:24:58.87:0,59,498	0/1:8,0:8:5.16:5,0,35	1/1:5,18:23:29.39:650,29,0	1/1:5,21:26:34.31:647,34,0	0/0:21,0:20:29.22:0,29,505	0/0:22,0:22:34.54:0,35,544	0/1:16,0:16:36.50:37,0,82	1/1:23,0:23:37.92:566,38,0	1/1:19,0:19:20.53:318,21,0	1/1:25,0:25:47.88:282,48,0	1/1:18,0:16:38.87:201,39,0	1/1:3,14:18:17.90:381,18,0	1/1:4,28:32:68.02:962,68,0	1/1:4,11:15:32.78:418,33,0	0/0:24,0:23:64.02:0,64,766	0/0:18,0:18:43.90:0,44,494	0/0:14,0:14:38.53:0,39,406	0/1:21,0:21:36.87:37,0,45	1/1:7,23:33:58.31:875,58,0	0/1:6,14:21:14.77:389,0,15	1/1:2,15:17:27.08:439,27,0
chr10	53956996	.	A	AC	5052.54	PASS	AB=0.966;AC=29;AF=0.518;AN=56;BaseQRankSum=4.813;DP=604;FS=2.496;HRun=0;HaplotypeScore=102.3668;InbreedingCoeff=0.3458;MQ=68.11;MQ0=5;MQRankSum=1.880;QD=12.51;ReadPosRankSum=6.948;VQSLOD=5.6109;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:63.18:0,63,690	1/1:6,11:17:36.57:347,37,0	0/0:36,0:19:31.39:0,31,263	0/0:19,0:11:0.71:0,1,156	1/1:28,1:29:7.30:142,7,0	0/1:18,3:20:27.31:176,0,27	0/1:19,0:19:40.35:93,0,40	0/0:24,0:24:53.29:0,53,502	0/1:9,0:9:4.22:15,0,4	0/1:22,2:24:2.76:345,0,3	0/1:27,0:27:35.81:217,0,36	0/0:22,0:21:50.55:0,51,544	0/0:22,0:22:59.56:0,60,622	0/1:16,0:16:26.62:57,0,27	1/1:11,12:23:57.35:462,57,0	1/1:12,7:19:35.45:289,35,0	1/1:6,19:25:64.51:734,65,0	1/1:2,15:16:42.13:521,42,0	0/1:18,1:19:37.53:197,0,38	1/1:29,2:31:9.57:397,10,0	1/1:12,3:15:32.51:260,33,0	0/0:24,0:23:64.04:0,64,758	0/0:17,0:17:49.33:0,49,551	0/0:13,0:13:34.33:0,34,380	1/1:21,0:21:13.44:95,13,0	0/1:32,2:34:71.15:424,0,71	0/1:22,0:22:69.62:115,0,70	1/1:16,0:16:26.44:166,26,0
chr10	53956998	.	A	AC	68.08	PASS	AB=0.661;AC=3;AF=0.054;AN=56;BaseQRankSum=8.709;DP=599;FS=2.203;HRun=0;HaplotypeScore=116.5474;InbreedingCoeff=-0.0570;MQ=68.84;MQ0=5;MQRankSum=-0.182;QD=1.17;ReadPosRankSum=4.451;VQSLOD=1.9878;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:64.39:0,64,723	0/1:6,11:17:65.25:65,0,96	0/0:35,0:18:41.66:0,42,322	0/0:19,0:11:17.76:0,18,193	0/0:29,0:29:82.50:0,83,997	0/0:22,0:22:28.21:0,28,222	0/0:19,0:19:38.64:0,39,308	0/0:21,0:21:42.27:0,42,435	0/0:9,0:9:27.01:0,27,334	0/0:23,0:23:65.41:0,65,540	0/0:27,0:27:63.98:0,64,514	0/0:22,0:21:54.06:0,54,595	0/0:22,0:22:60.04:0,60,640	0/0:16,0:16:43.33:0,43,529	0/1:12,12:24:71.93:72,0,153	0/1:10,7:17:31.01:31,0,172	0/0:25,0:25:66.36:0,66,399	0/0:17,0:16:36.55:0,37,163	0/0:19,0:19:53.40:0,53,414	0/0:31,0:31:80.16:0,80,638	0/0:15,0:15:32.28:0,32,243	0/0:24,0:23:69.04:0,69,803	0/0:18,0:18:52.91:0,53,591	0/0:14,0:14:37.33:0,37,408	0/0:19,0:19:52.67:0,53,698	0/0:36,0:36:99:0,101,767	0/0:21,0:21:43.68:0,44,338	0/0:16,0:16:32.88:0,33,269
chr10	53957000	.	A	AC	549.04	PASS	AB=0.772;AC=5;AF=0.089;AN=56;BaseQRankSum=7.890;DP=595;FS=2.202;HRun=0;HaplotypeScore=113.5079;InbreedingCoeff=0.4294;MQ=70.30;MQ0=5;MQRankSum=-1.538;QD=6.95;ReadPosRankSum=2.664;VQSLOD=3.6702;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:64.84:0,65,729	0/1:7,11:18:16.39:213,0,16	0/0:35,0:18:46.55:0,47,379	0/1:20,0:12:9.73:10,0,161	0/0:29,0:29:83.33:0,83,1005	0/0:21,0:21:31.17:0,31,245	0/0:19,0:19:38.49:0,38,297	0/0:21,0:21:43.32:0,43,435	0/0:9,0:9:27.05:0,27,340	0/0:20,0:20:59.48:0,59,496	0/0:28,0:28:69.87:0,70,539	0/0:22,0:21:54.06:0,54,594	0/0:22,0:22:60.05:0,60,641	0/0:15,0:15:45.11:0,45,569	1/1:13,12:25:8.11:283,8,0	0/1:9,7:16:2.65:157,0,3	0/0:24,0:24:63.47:0,63,382	0/0:17,0:16:40.05:0,40,192	0/0:20,0:20:59.46:0,59,467	0/0:32,0:32:88.87:0,89,665	0/0:15,0:15:32.23:0,32,230	0/0:23,0:22:63.10:0,63,753	0/0:17,0:17:50.68:0,51,560	0/0:13,0:13:34.33:0,34,384	0/0:19,0:19:57.11:0,57,730	0/0:37,0:37:99:0,100,755	0/0:20,0:20:43.83:0,44,337	0/0:16,0:16:32.81:0,33,253
chr10	53958168	.	AG	A	4065.63	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=13.532;DP=602;FS=1.248;HRun=3;HaplotypeScore=107.1861;InbreedingCoeff=0.9924;MQ=60.24;MQ0=1;MQRankSum=3.330;QD=29.25;ReadPosRankSum=2.182;VQSLOD=3.0311;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,105,1460	0/0:4,0:4:12.03:0,12,155	0/0:23,0:14:39.10:0,39,515	0/0:20,0:18:50.54:0,51,628	1/1:2,22:24:54.10:630,54,0	0/0:19,0:19:54.18:0,54,776	0/0:25,0:25:66.16:0,66,906	0/0:24,0:24:69.22:0,69,977	1/1:2,19:21:51.16:612,51,0	0/0:14,0:14:39.13:0,39,560	0/0:9,0:9:24.08:0,24,344	0/0:18,0:18:51.16:0,51,718	0/0:35,0:35:99:0,105,1503	1/1:0,25:25:66.20:792,66,0	0/0:18,0:18:48.16:0,48,691	0/0:17,0:17:48.15:0,48,691	1/1:1,19:20:42.13:504,42,0	1/1:3,28:31:75.23:900,75,0	0/0:14,0:11:33.08:0,33,447	0/0:24,0:24:63.17:0,63,879	0/0:50,0:50:99:0,133,1826	0/0:19,0:19:51.17:0,51,728	0/0:16,0:16:48.14:0,48,671	0/0:18,0:18:51.17:0,51,732	1/1:0,18:18:54.10:629,54,0	0/0:23,0:23:63.21:0,63,900	0/0:29,0:29:87.29:0,87,1245	0/0:8,0:8:21.07:0,21,302
chr10	53958217	.	A	ATTTC	9274.96	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=13.728;DP=489;FS=3.365;HRun=0;HaplotypeScore=176.4159;InbreedingCoeff=0.9989;MQ=67.70;MQ0=0;MQRankSum=-13.891;QD=66.25;ReadPosRankSum=-0.668;VQSLOD=5.7088;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:89.37:0,89,1795	0/0:10,0:10:30.10:0,30,599	0/0:18,0:15:33.15:0,33,784	0/0:25,0:25:66.22:0,66,1183	0/0:20,0:20:54.19:0,54,1078	1/1:7,8:15:39.09:897,39,0	1/1:9,0:9:27.05:581,27,0	0/0:15,0:15:42.14:0,42,805	0/0:22,0:22:63.22:0,63,1244	1/1:10,10:20:60.21:1423,60,0	1/1:5,6:11:33.11:806,33,0	0/0:21,0:21:63.22:0,63,1258	0/0:22,0:22:66.23:0,66,1307	0/0:23,0:23:66.23:0,66,1318	0/0:19,0:18:54.19:0,54,1059	0/0:9,0:9:27.09:0,27,539	0/0:24,0:24:66.20:0,66,1281	0/0:21,0:21:57.20:0,57,1120	1/1:7,1:8:24.08:572,24,0	1/1:13,8:21:60.19:1384,60,0	1/1:9,2:12:27.08:558,27,0	0/0:19,0:19:54.17:0,54,1028	0/0:15,0:15:42.13:0,42,803	0/0:11,0:11:33.10:0,33,623	0/0:23,0:23:69.22:0,69,1343	1/1:8,10:18:51.18:1208,51,0	1/1:8,9:17:51.18:1178,51,0	1/1:2,7:9:27.09:667,27,0
chr10	53958218	.	TA	T	374.83	PASS	AC=18;AF=0.333;AN=54;BaseQRankSum=12.489;DP=430;FS=0.000;HRun=1;HaplotypeScore=128.4342;InbreedingCoeff=0.9276;MQ=69.58;MQ0=0;MQRankSum=-11.142;QD=4.74;ReadPosRankSum=4.467;VQSLOD=0.4355;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:90.31:0,90,1438	0/0:10,0:10:30.10:0,30,477	0/0:19,0:16:48.16:0,48,741	0/0:23,0:23:66.22:0,66,1022	0/0:20,0:20:57.19:0,57,907	1/1:9,0:9:6.30:38,6,0	./.	0/0:15,0:15:42.14:0,42,672	0/0:22,0:22:63.21:0,63,1005	1/1:13,2:15:30.24:152,30,0	1/1:7,0:7:12.59:38,13,0	0/0:21,0:21:63.21:0,63,1007	0/0:24,0:24:72.22:0,72,1101	0/0:23,0:23:66.22:0,66,1052	0/0:19,0:18:54.18:0,54,852	0/0:9,0:9:27.09:0,27,432	0/0:24,0:24:69.21:0,69,1074	0/0:21,0:21:57.19:0,57,904	1/1:1,0:1:2.50:9,2,0	1/1:11,0:11:20.87:76,21,0	1/1:5,1:6:5.23:42,5,0	0/0:19,0:19:57.18:0,57,885	0/0:16,0:16:48.14:0,48,721	0/0:11,0:11:33.10:0,33,504	0/0:23,0:23:69.24:0,69,1100	1/1:10,1:11:24.22:88,24,0	1/1:11,0:11:19.52:63,20,0	1/1:8,0:8:19.05:66,19,0
chr10	53958219	.	A	ATTCT	3669.55	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=12.459;DP=429;FS=1.607;HRun=0;HaplotypeScore=140.7888;InbreedingCoeff=0.9399;MQ=68.57;MQ0=0;MQRankSum=-10.373;QD=45.87;ReadPosRankSum=2.139;VQSLOD=4.4949;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:89.37:0,89,1886	0/0:10,0:10:30.10:0,30,615	0/0:18,0:15:45.14:0,45,848	0/0:23,0:23:63.17:0,63,1270	0/0:21,0:21:57.20:0,57,1166	1/1:1,8:9:24.01:400,24,0	0/1:1,0:1:0:0,0,0	0/0:14,0:14:42.14:0,42,880	0/0:22,0:22:63.22:0,63,1307	1/1:5,10:15:45.11:723,45,0	1/1:2,6:8:24.08:392,24,0	0/0:21,0:21:63.22:0,63,1322	0/0:25,0:25:72.21:0,72,1396	0/0:23,0:23:66.23:0,66,1371	0/0:20,0:19:54.19:0,54,1129	0/0:9,0:9:27.09:0,27,566	0/0:23,0:23:66.23:0,66,1360	0/0:21,0:21:57.20:0,57,1172	1/1:0,1:1:3.01:56,3,0	1/1:3,8:11:30.05:475,30,0	1/1:3,2:5:11.92:136,12,0	0/0:18,0:18:54.19:0,54,1114	0/0:17,0:17:48.14:0,48,929	0/0:10,0:10:30.10:0,30,629	0/0:23,0:23:69.24:0,69,1434	1/1:1,10:11:30.03:523,30,0	1/1:2,9:11:33.08:547,33,0	1/1:1,7:8:24.06:418,24,0
chr10	53958221	.	A	ATTT	3542.44	PASS	AC=18;AF=0.333;AN=54;BaseQRankSum=12.431;DP=421;FS=1.073;HRun=0;HaplotypeScore=134.5249;InbreedingCoeff=0.9604;MQ=66.57;MQ0=0;MQRankSum=-10.791;QD=47.87;ReadPosRankSum=3.918;VQSLOD=5.3662;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:89.31:0,89,1667	0/0:9,0:9:27.08:0,27,469	0/0:18,0:14:42.13:0,42,703	0/0:22,0:22:60.16:0,60,979	0/0:21,0:21:60.16:0,60,1075	1/1:2,8:10:21.07:386,21,0	./.	0/0:14,0:14:42.14:0,42,783	0/0:22,0:22:60.19:0,60,1087	1/1:2,10:12:35.95:593,36,0	1/1:2,6:8:24.05:397,24,0	0/0:21,0:21:63.22:0,63,1164	0/0:24,0:24:72.24:0,72,1300	0/0:23,0:23:63.22:0,63,1175	0/0:20,0:19:57.20:0,57,1057	0/0:10,0:10:30.09:0,30,523	0/0:23,0:23:66.23:0,66,1230	0/0:21,0:21:54.16:0,54,963	1/1:0,1:1:3.01:55,3,0	1/1:2,8:10:27.09:496,27,0	1/1:2,2:4:9.03:130,9,0	0/0:18,0:18:54.17:0,54,977	0/0:17,0:17:51.17:0,51,938	0/0:10,0:10:30.09:0,30,528	0/0:23,0:23:69.24:0,69,1286	1/1:2,10:12:30.10:537,30,0	1/1:0,9:9:27.09:495,27,0	1/1:1,7:8:24.08:453,24,0
chr10	53958326	.	TA	T	3817.51	PASS	AB=0.900;AC=21;AF=0.375;AN=56;BaseQRankSum=0.940;DP=522;FS=6.453;HRun=11;HaplotypeScore=62.5463;InbreedingCoeff=0.9031;MQ=63.45;MQ0=6;MQRankSum=0.860;QD=18.44;ReadPosRankSum=0.955;VQSLOD=4.8062;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:59.91:0,60,581	0/1:8,1:9:0.59:1,0,194	0/0:21,0:11:0.94:0,1,110	0/0:13,0:8:19.69:0,20,151	0/0:3,0:28:74.58:0,75,422	1/1:0,17:17:40.99:326,41,0	1/1:0,11:11:29.97:246,30,0	0/0:29,0:29:43.80:0,44,586	0/0:2,0:19:51.54:0,52,276	1/1:7,19:26:55.94:447,56,0	1/1:7,14:21:41.91:344,42,0	0/0:15,0:15:36.09:0,36,383	0/0:16,0:16:48.12:0,48,512	0/0:1,0:12:28.48:0,28,143	0/0:18,0:19:47.95:0,48,494	0/0:19,0:19:51.13:0,51,544	0/0:30,0:29:72.17:0,72,760	0/0:15,1:16:17.46:0,17,383	1/1:5,17:21:50.93:419,51,0	1/1:4,20:24:56.90:467,57,0	1/1:1,10:11:26.95:222,27,0	0/0:11,1:12:5.26:0,5,245	0/0:11,0:11:30.06:0,30,307	0/0:5,0:5:15.04:0,15,160	0/0:4,0:26:59.89:0,60,317	1/1:4,22:26:65.90:541,66,0	1/1:3,27:30:48.92:608,49,0	1/1:0,9:9:23.97:197,24,0
chr10	53958591	.	T	TA	13489.38	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=11.645;DP=546;FS=3.677;HRun=5;HaplotypeScore=76.8170;InbreedingCoeff=0.9950;MQ=71.82;MQ0=0;MQRankSum=-1.776;QD=34.77;ReadPosRankSum=2.418;VQSLOD=5.0220;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:56.97:0,57,581	1/1:0,6:6:15.05:197,15,0	0/0:11,0:11:30.05:0,30,308	0/0:12,0:12:26.80:0,27,270	1/1:1,28:29:81.22:1046,81,0	1/1:2,22:24:60.20:790,60,0	1/1:0,9:9:24.08:316,24,0	0/0:28,0:28:78.17:0,78,821	1/1:2,17:19:48.16:630,48,0	1/1:1,28:30:87.27:1128,87,0	1/1:3,22:25:66.21:865,66,0	0/0:17,0:17:48.09:0,48,500	0/0:30,0:30:87.20:0,87,927	1/1:2,13:15:30.10:395,30,0	1/1:0,15:15:45.15:592,45,0	1/1:0,22:22:57.19:750,57,0	1/1:1,7:8:18.06:237,18,0	1/1:0,15:15:42.14:553,42,0	1/1:5,23:29:75.17:926,75,0	1/1:1,27:28:78.25:1025,78,0	1/1:0,8:8:24.08:316,24,0	0/0:11,0:11:30.08:0,30,322	0/0:19,0:19:51.11:0,51,539	0/0:9,0:9:27.07:0,27,290	1/1:0,28:28:78.25:1026,78,0	1/1:0,26:26:78.25:1026,78,0	1/1:4,28:33:81.18:1042,81,0	1/1:0,19:19:48.16:632,48,0
chr10	53959023	.	C	CAAA	1233.84	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=1.850;DP=528;FS=4.964;HRun=10;HaplotypeScore=91.8004;InbreedingCoeff=0.9786;MQ=70.24;MQ0=0;MQRankSum=-2.924;QD=45.70;ReadPosRankSum=0.072;VQSLOD=3.8780;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:45.08:0,45,518	0/0:11,0:11:25.41:0,25,325	0/0:11,0:12:16.11:0,16,186	0/0:8,0:8:14.99:0,15,154	0/0:34,0:34:99:0,99,1191	0/0:19,0:19:51.15:0,51,620	0/0:9,0:9:21.03:0,21,255	0/0:28,0:30:69.02:0,69,800	0/0:12,0:12:30.06:0,30,352	0/0:17,0:18:40.39:0,40,489	0/0:29,0:30:84.17:0,84,1001	0/0:12,0:12:30.09:0,30,364	0/0:25,0:25:72.20:0,72,863	0/0:19,0:19:48.06:0,48,583	0/0:17,0:17:48.14:0,48,583	0/0:18,0:18:47.71:0,48,557	1/1:2,16:19:51.15:945,51,0	1/1:2,4:8:24.08:410,24,0	0/0:20,0:20:45.05:0,45,505	0/0:41,0:42:99:0,104,1273	0/0:10,0:12:23.77:0,24,310	0/0:16,0:16:42.12:0,42,511	0/0:22,0:23:60.05:0,60,699	0/0:12,0:12:30.05:0,30,365	0/0:17,0:17:45.08:0,45,546	0/0:20,0:20:54.15:0,54,656	0/0:33,0:34:81.10:0,81,954	0/0:13,0:13:23.98:0,24,292
chr10	53959445	.	A	AAG	5660.13	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=13.863;DP=629;FS=0.812;HRun=0;HaplotypeScore=88.2118;InbreedingCoeff=0.9993;MQ=87.07;MQ0=0;MQRankSum=0.428;QD=37.73;ReadPosRankSum=2.331;VQSLOD=7.0854;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:93.31:0,93,1236	0/0:10,0:10:24.08:0,24,319	0/0:24,0:24:48.08:0,48,582	0/0:26,0:26:64.97:0,65,769	1/1:6,30:37:87.30:1463,87,0	0/0:15,0:15:45.10:0,45,564	0/0:18,0:18:54.16:0,54,691	0/0:12,0:12:31.36:0,31,433	1/1:1,20:21:54.18:934,54,0	0/0:26,0:26:69.23:0,69,919	0/0:35,0:35:96.30:0,96,1250	0/0:25,0:25:66.21:0,66,866	0/0:22,0:22:66.21:0,66,863	1/1:2,19:21:48.16:806,48,0	0/0:26,0:26:69.22:0,69,906	0/0:18,0:18:48.16:0,48,639	1/1:5,21:26:48.16:814,48,0	1/1:4,23:28:53.59:934,54,0	0/0:19,0:19:42.14:0,42,557	0/0:28,0:28:75.24:0,75,985	0/0:22,0:22:57.19:0,57,755	0/0:14,0:14:39.13:0,39,519	0/0:21,0:21:57.17:0,57,732	0/0:10,0:10:27.08:0,27,343	1/1:2,15:17:42.14:711,42,0	0/0:26,0:26:69.22:0,69,906	0/0:33,0:33:84.28:0,84,1117	0/0:16,0:16:45.15:0,45,599
chr10	53959680	.	C	CT	4731.43	PASS	AB=0.804;AC=20;AF=0.357;AN=56;BaseQRankSum=-12.400;DP=573;FS=10.396;HRun=10;HaplotypeScore=75.5547;InbreedingCoeff=0.8400;MQ=73.04;MQ0=1;MQRankSum=1.459;QD=22.11;ReadPosRankSum=0.967;VQSLOD=5.3203;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:67.29:0,67,555	0/0:17,0:17:47.91:0,48,391	0/0:17,0:14:16.98:0,17,126	0/0:13,1:12:8.23:0,8,67	0/0:3,0:34:57.02:0,57,168	1/1:1,23:24:60.14:640,60,0	1/1:4,14:19:38.93:398,39,0	0/0:34,0:34:68.45:0,68,536	0/0:4,0:19:26.47:0,26,78	1/1:4,30:34:62.24:813,62,0	1/1:5,17:23:45.12:479,45,0	0/0:19,1:21:20.94:0,21,363	0/0:23,0:23:61.31:0,61,496	0/0:0,0:21:34.63:0,35,102	0/0:24,0:24:59.82:0,60,480	0/0:16,0:17:40.97:0,41,324	0/0:3,0:14:20.37:0,20,59	0/0:3,0:16:20.42:0,20,61	0/1:7,6:13:19.55:170,0,20	1/1:5,24:29:69.52:699,70,0	1/1:1,13:14:27.07:288,27,0	0/0:9,0:10:23:0,23,178	0/0:17,0:17:41.94:0,42,345	0/1:11,1:12:5.10:5,0,162	0/0:1,0:34:55:0,55,162	1/1:4,24:28:72.16:759,72,0	1/1:2,12:14:36.09:384,36,0	1/1:1,3:4:9.02:96,9,0
chr10	53962675	.	GTGGGGCAGGCTCTGAA	G	688.58	PASS	AB=0.583;AC=5;AF=0.093;AN=54;BaseQRankSum=3.902;DP=703;FS=10.441;HRun=0;HaplotypeScore=162.4375;InbreedingCoeff=0.5598;MQ=41.91;MQ0=47;MQRankSum=-3.385;QD=12.52;ReadPosRankSum=0.618;VQSLOD=2.2215;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:43:42.55:0,43,2651	0/1:2,5:6:99:239,0,206	./.	0/0:11,0:1:3.01:0,3,151	0/0:30,0:28:50.73:0,51,3441	0/0:29,0:27:51.16:0,51,3370	0/0:32,0:15:15.05:0,15,1104	0/0:38,0:3:6.02:0,6,466	0/0:21,0:15:33.10:0,33,2302	0/0:28,0:26:75.26:0,75,5027	0/0:20,0:19:30.10:0,30,2095	0/0:35,0:32:45.15:0,45,3446	0/0:22,0:22:36.03:0,36,2526	0/0:27,0:18:29.84:0,30,1719	1/1:7,15:11:9.03:419,9,0	1/1:1,25:14:3.01:140,3,0	0/0:22,0:20:27.09:0,27,2060	0/0:26,0:25:39.13:0,39,2930	0/0:13,0:7:21.07:0,21,1445	0/0:27,0:25:57.15:0,57,3924	0/0:36,0:26:26.80:0,27,1960	0/0:22,0:22:39.01:0,39,3059	0/0:23,0:23:42.10:0,42,3072	0/0:40,0:36:42.14:0,42,2902	0/0:16,0:15:24.08:0,24,1578	0/0:30,0:29:87.30:0,87,6580	0/0:28,0:23:44.14:0,44,3410	0/0:12,0:12:15.05:0,15,1031
chr10	53962843	.	A	AT	9454.03	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=5.309;DP=754;FS=2.541;HRun=3;HaplotypeScore=84.3710;InbreedingCoeff=0.9616;MQ=64.12;MQ0=7;MQRankSum=0.449;QD=34.38;ReadPosRankSum=1.870;VQSLOD=5.4518;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:33:87.21:0,87,1027	0/0:14,0:14:42.13:0,42,504	0/0:20,0:16:45.11:0,45,503	0/0:19,0:17:50.86:0,51,533	0/0:22,0:22:60.11:0,60,678	1/1:0,30:30:60.20:840,60,0	1/1:3,28:28:0.24:851,0,0	0/0:45,0:37:99:0,102,1224	0/0:20,0:20:57.15:0,57,661	1/1:4,49:53:99:2026,147,0	1/1:0,19:19:45.15:630,45,0	0/0:21,0:20:51.03:0,51,579	0/0:30,0:30:81.22:0,81,948	0/0:31,0:31:75.16:0,75,881	0/0:32,0:31:75.23:0,75,899	0/0:31,0:27:51.16:0,51,612	0/0:33,0:33:81.22:0,81,949	0/0:18,0:17:39.08:0,39,452	1/1:2,15:14:42.11:568,42,0	1/1:1,27:28:72.21:986,72,0	1/1:1,32:33:84.28:1176,84,0	0/0:28,0:28:72.21:0,72,852	0/0:22,0:21:51.15:0,51,612	0/0:33,0:32:90.23:0,90,1063	0/0:26,0:26:60.17:0,60,708	1/1:3,25:28:75.24:1033,75,0	1/1:0,27:26:69.23:966,69,0	1/1:0,9:9:27.09:378,27,0
chr10	53963196	.	A	AACTT	9459.63	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=12.594;DP=714;FS=7.230;HRun=0;HaplotypeScore=120.2710;InbreedingCoeff=0.9999;MQ=85.88;MQ0=0;MQRankSum=-2.909;QD=60.64;ReadPosRankSum=0.325;VQSLOD=6.3673;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:75.24:0,75,1319	0/0:14,0:14:36.12:0,36,647	0/0:17,0:17:42.12:0,42,664	0/0:31,0:31:75.20:0,75,1309	1/1:3,21:25:60.21:1546,60,0	0/0:20,0:20:57.18:0,57,980	0/0:19,0:19:48.16:0,48,858	0/0:22,0:21:48.16:0,48,843	1/1:6,21:27:63.18:1556,63,0	0/0:32,0:32:90.27:0,90,1559	0/0:33,0:33:78.27:0,78,1384	0/0:23,0:23:69.24:0,69,1224	0/0:34,0:34:99:0,99,1762	1/1:6,20:27:63.22:1617,63,0	0/0:29,0:29:87.30:0,87,1562	0/0:30,0:30:87.28:0,87,1534	1/1:6,18:24:43.39:1078,43,0	1/1:2,15:17:42.14:1091,42,0	0/0:19,0:18:57.19:0,57,995	0/0:23,0:23:63.22:0,63,1122	0/0:35,0:35:99:0,99,1725	0/0:18,0:18:48.16:0,48,863	0/0:19,0:19:51.17:0,51,916	0/0:29,0:29:78.27:0,78,1349	1/1:1,35:36:99:2572,99,0	0/0:33,0:33:93.32:0,93,1671	0/0:38,0:38:99:0,114,2025	0/0:13,0:13:36.12:0,36,641
chr10	53963744	.	GA	G	3939.55	PASS	AB=1.000;AC=33;AF=0.589;AN=56;BaseQRankSum=9.776;DP=448;FS=15.111;HRun=9;HaplotypeScore=91.6092;InbreedingCoeff=0.8790;MQ=47.03;MQ0=10;MQRankSum=-7.183;QD=14.65;ReadPosRankSum=3.587;VQSLOD=2.4151;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:44:68.19:0,68,791	0/0:5,0:4:12.04:0,12,138	0/0:3,0:2:6.02:0,6,66	0/0:2,0:2:0:0,0,0	1/1:1,17:18:38.69:340,39,0	1/1:5,8:13:30:273,30,0	1/1:12,6:18:17.93:159,18,0	0/0:23,0:21:47.86:0,48,517	1/1:3,14:16:35.98:329,36,0	1/1:7,8:13:20.86:260,21,0	1/1:10,11:20:29.94:269,30,0	0/0:23,0:22:42.07:0,42,461	0/0:20,0:20:44.96:0,45,443	1/1:4,6:10:14.47:181,14,0	0/0:12,0:12:26.66:0,27,282	0/0:20,0:20:45.03:0,45,480	1/1:7,8:15:15.42:106,15,0	1/1:8,9:17:19.97:209,20,0	1/1:3,13:16:38.92:356,39,0	1/1:9,10:16:26.90:246,27,0	1/1:4,3:7:6:55,6,0	0/0:14,0:14:27.07:0,27,303	0/0:13,0:13:24.05:0,24,257	0/1:15,0:15:2.97:3,0,209	1/1:7,17:24:44.99:407,45,0	1/1:4,12:17:13.77:355,14,0	1/1:10,6:16:20.37:173,20,0	1/1:2,9:9:24.01:220,24,0
chr10	53963756	.	A	ACCCC	2754.51	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=8.789;DP=485;FS=0.522;HRun=2;HaplotypeScore=128.2214;InbreedingCoeff=0.9685;MQ=49.97;MQ0=7;MQRankSum=-7.433;QD=44.43;ReadPosRankSum=2.227;VQSLOD=2.0879;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,99,1674	0/0:5,0:4:12.02:0,12,176	0/0:7,0:6:18.05:0,18,259	0/0:3,0:5:11.04:0,11,98	1/1:15,5:20:48.16:911,48,0	0/0:13,0:13:30.06:0,30,465	0/0:18,0:18:42.13:0,42,636	0/0:21,0:20:60.17:0,60,1053	1/1:14,1:14:39.12:624,39,0	0/0:16,0:15:37.62:0,38,636	0/0:22,0:21:51.14:0,51,768	0/0:17,0:16:48.16:0,48,873	0/0:20,0:20:51.17:0,51,892	1/1:7,3:10:30.10:511,30,0	0/0:15,0:15:42.10:0,42,715	0/0:19,0:19:42.13:0,42,728	0/0:16,0:16:24.61:0,25,196	0/0:16,0:16:21.75:0,22,261	0/0:24,0:25:72.24:0,72,1224	0/0:26,0:24:55.63:0,56,827	0/0:6,0:6:12.04:0,12,190	0/0:13,0:13:30.10:0,30,548	0/0:16,0:16:39.11:0,39,685	0/0:16,0:16:33.10:0,33,583	1/1:13,4:17:48.16:869,48,0	0/0:28,0:28:78.26:0,78,1310	0/0:20,0:19:45.36:0,45,765	0/0:18,0:16:39.13:0,39,678
chr10	53963758	.	C	CAA	3547.20	PASS	AB=0.833;AC=25;AF=0.446;AN=56;BaseQRankSum=-1.200;DP=497;FS=0.468;HRun=13;HaplotypeScore=105.7738;InbreedingCoeff=0.7908;MQ=50.65;MQ0=6;MQRankSum=-1.149;QD=13.97;ReadPosRankSum=-5.150;VQSLOD=1.4317;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:48:55.83:0,56,538	0/1:4,0:4:0.12:0,0,44	0/0:6,0:6:13.15:0,13,109	0/0:5,0:5:4.70:0,5,37	0/0:17,0:17:23.26:0,23,141	1/1:6,5:12:19.36:218,19,0	1/1:7,8:18:25.88:277,26,0	0/0:20,0:22:26:0,26,252	0/0:12,0:12:30.06:0,30,168	1/1:10,6:16:5.53:293,6,0	1/1:10,7:22:22.79:318,23,0	0/0:18,0:19:26.26:0,26,208	0/0:17,0:21:21.75:0,22,206	0/0:10,0:10:17.36:0,17,97	0/0:12,0:15:21.23:0,21,209	0/0:16,0:18:32.37:0,32,261	1/1:10,0:17:15.89:184,16,0	1/1:5,1:14:24.07:284,24,0	1/1:15,7:26:23.74:374,24,0	1/1:11,15:26:18.14:469,18,0	0/1:4,4:8:11.93:12,0,20	0/0:13,0:14:20.63:0,21,170	0/1:17,0:18:5.29:5,0,261	0/0:18,0:18:23.87:0,24,211	0/0:15,0:15:29.81:0,30,170	1/1:13,14:29:21.18:534,21,0	1/1:7,12:20:31.93:354,32,0	1/1:9,9:17:18.02:224,18,0
chr10	53965263	.	GTGA	G	1646.92	PASS	AB=0.988;AC=9;AF=0.161;AN=56;BaseQRankSum=13.792;DP=686;FS=0.432;HRun=0;HaplotypeScore=133.4146;InbreedingCoeff=0.5892;MQ=64.30;MQ0=6;MQRankSum=-8.835;QD=14.97;ReadPosRankSum=1.737;VQSLOD=3.4251;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,147,3195	0/0:6,0:6:15.03:0,15,359	0/0:36,0:16:40.36:0,40,503	0/0:29,0:16:10.02:0,10,209	0/1:25,0:25:36.20:260,0,36	0/0:16,0:16:29.08:0,29,980	0/0:35,0:35:99:0,103,2212	0/0:19,0:18:51.03:0,51,960	1/1:13,1:14:41.95:376,42,0	0/0:30,0:30:90.19:0,90,1913	0/0:18,0:18:54.16:0,54,1183	0/0:23,0:23:66.13:0,66,1404	0/0:39,0:39:99:0,106,2300	1/1:14,3:17:50.97:511,51,0	0/0:35,0:35:85.14:0,85,2117	0/0:31,0:31:93.28:0,93,2009	0/1:26,1:26:31.19:226,0,31	0/1:13,0:13:44.03:118,0,44	0/0:15,0:15:45.13:0,45,891	0/0:18,0:18:54.13:0,54,1114	0/0:45,0:45:99:0,129,2814	0/0:19,0:19:56.90:0,57,1185	0/0:16,0:16:45.14:0,45,977	0/0:36,0:35:91.90:0,92,2004	1/1:14,0:14:23.94:315,24,0	0/0:34,0:34:99:0,102,2330	0/0:20,0:20:57.18:0,57,1229	0/0:6,0:6:18.06:0,18,436
chr10	53965264	.	TGAG	T	2975.44	PASS	AB=0.795;AC=12;AF=0.214;AN=56;BaseQRankSum=13.573;DP=687;FS=2.041;HRun=0;HaplotypeScore=130.3637;InbreedingCoeff=0.7778;MQ=64.02;MQ0=6;MQRankSum=-10.702;QD=20.52;ReadPosRankSum=1.038;VQSLOD=3.7924;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,135,2603	0/0:6,0:6:15.05:0,15,316	0/1:36,0:16:5.78:6,0,336	0/0:30,0:17:6.45:0,6,110	1/1:2,22:24:39.09:562,39,0	0/0:16,1:17:10.22:0,10,857	0/0:35,0:35:93.23:0,93,1795	0/0:22,0:21:48.07:0,48,824	1/1:1,13:14:42.14:608,42,0	0/0:29,0:29:81.22:0,81,1527	0/0:17,0:17:48.16:0,48,929	0/0:23,0:23:60.21:0,60,1245	0/0:38,0:38:96.33:0,96,1989	1/1:4,13:17:51.16:727,51,0	0/0:35,0:35:96.29:0,96,1872	0/0:31,0:31:87.30:0,87,1786	1/1:9,18:26:33.03:468,33,0	0/1:4,9:13:38.90:205,0,39	0/0:15,0:15:39.11:0,39,682	0/0:18,0:18:48.15:0,48,925	0/0:45,0:45:99:0,117,2356	0/0:19,0:19:51.16:0,51,1000	0/0:15,0:15:42.13:0,42,801	0/0:35,0:34:80.58:0,81,1682	1/1:0,14:14:39.13:580,39,0	0/0:35,0:35:99:0,99,1988	0/0:19,0:19:54.19:0,54,1133	0/0:6,0:6:18.06:0,18,379
chr10	53965303	.	TGAGGAGGAGGGAGAG	T	5813.28	PASS	AB=0.923;AC=10;AF=0.179;AN=56;BaseQRankSum=12.483;DP=759;FS=8.169;HRun=0;HaplotypeScore=309.4395;InbreedingCoeff=0.7460;MQ=60.12;MQ0=13;MQRankSum=-11.983;QD=59.93;ReadPosRankSum=1.267;VQSLOD=2.9978;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,147,6803	0/0:7,0:7:18.06:0,18,711	0/0:49,0:10:14.47:0,14,327	0/0:57,0:24:48.50:0,49,1105	1/1:11,10:21:39.12:1114,39,0	0/0:19,0:19:51.18:0,51,2753	0/0:33,0:33:75.24:0,75,3291	0/0:28,0:25:60.05:0,60,2074	1/1:9,9:18:22.54:1569,23,0	0/0:28,0:28:81.28:0,81,4115	0/0:17,0:17:39.13:0,39,1839	0/0:24,0:24:69.23:0,69,3408	0/0:37,0:37:99:0,99,3964	1/1:11,7:18:14.75:916,15,0	0/0:37,0:37:99:0,102,4598	0/0:37,0:37:99:0,102,4681	0/1:14,1:15:56.35:435,0,56	0/1:9,1:10:34.11:565,0,34	0/0:26,0:22:54.18:0,54,1960	0/0:15,0:15:45.14:0,45,1981	0/0:48,0:47:99:0,120,5297	0/0:23,0:23:63.22:0,63,2689	0/0:12,0:12:33.11:0,33,1415	0/0:34,0:34:86.46:0,86,4024	1/1:10,5:15:36.12:1214,36,0	0/0:39,0:39:99:0,105,5191	0/0:26,0:26:75.24:0,75,3434	0/0:12,0:12:33.11:0,33,1494
chr10	53965312	.	GGGA	G	1729.97	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=13.473;DP=780;FS=8.687;HRun=0;HaplotypeScore=161.8875;InbreedingCoeff=0.9222;MQ=58.44;MQ0=18;MQRankSum=-12.504;QD=18.40;ReadPosRankSum=1.030;VQSLOD=2.9616;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,156,3147	0/0:7,0:7:19.31:0,19,348	0/0:52,0:11:17.69:0,18,248	0/0:60,0:22:45.74:0,46,750	1/1:17,3:21:38.47:443,38,0	0/0:18,0:18:54.19:0,54,1230	0/0:31,1:32:90.29:0,90,1865	0/0:28,0:24:60.37:0,60,1249	1/1:18,3:21:54.55:486,55,0	0/0:32,0:32:96.33:0,96,2070	0/0:13,0:13:39.13:0,39,820	0/0:28,0:28:80.63:0,81,1681	0/0:38,0:38:99:0,111,2105	1/1:12,4:16:9.89:320,10,0	0/0:38,0:38:99:0,107,2089	0/0:43,0:43:99:0,126,2505	1/1:8,2:11:4.13:148,4,0	1/1:9,0:10:3.62:120,4,0	0/0:23,0:20:57.17:0,57,1045	0/0:18,0:18:54.17:0,54,1068	0/0:49,1:49:99:0,135,2771	0/0:23,0:23:68.58:0,69,1349	0/0:16,0:16:43.02:0,43,878	0/0:34,0:34:91.68:0,92,1988	1/1:11,4:15:38.76:385,39,0	0/0:42,0:42:99:0,126,2706	0/0:25,0:25:75.24:0,75,1574	0/0:12,0:12:33.10:0,33,679
chr10	53965313	.	GGA	G	319.40	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=10.967;DP=770;FS=9.095;HRun=0;HaplotypeScore=148.9173;InbreedingCoeff=0.8045;MQ=57.93;MQ0=17;MQRankSum=-9.435;QD=4.15;ReadPosRankSum=1.757;VQSLOD=2.5513;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,153,2535	0/0:7,0:7:14.61:0,15,258	0/0:50,0:10:15.55:0,16,205	0/0:61,0:22:43.94:0,44,557	1/1:18,1:19:10.64:47,11,0	0/0:18,0:18:54.18:0,54,973	0/0:32,0:32:84.27:0,84,1444	0/0:29,0:25:54.91:0,55,915	1/1:16,4:20:7.46:197,7,0	0/0:32,0:32:96.33:0,96,1638	0/0:13,0:13:36.12:0,36,623	0/0:27,0:27:78.24:0,78,1336	0/0:38,0:38:99:0,99,1636	1/1:16,0:16:22.54:142,23,0	0/0:37,0:37:76.79:0,77,1526	0/0:42,0:42:99:0,114,1976	0/0:11,0:11:7.56:0,8,75	0/1:8,0:8:12.63:13,0,55	0/0:23,0:20:51.17:0,51,788	0/0:19,0:19:51.16:0,51,871	0/0:49,0:48:99:0,123,2105	0/0:23,0:23:60.32:0,60,1035	0/0:17,0:17:48.06:0,48,761	0/0:34,0:34:93.31:0,93,1592	1/1:12,2:14:11.76:73,12,0	0/0:42,0:42:99:0,123,2125	0/0:25,0:25:72.24:0,72,1219	0/0:11,0:11:33.11:0,33,555
chr10	53967380	.	TGCAC	T	1823.35	PASS	AB=1.000;AC=16;AF=0.286;AN=56;BaseQRankSum=3.941;DP=664;FS=0.000;HRun=0;HaplotypeScore=156.3539;InbreedingCoeff=0.6126;MQ=62.73;MQ0=12;MQRankSum=-5.602;QD=8.68;ReadPosRankSum=-1.946;VQSLOD=2.5712;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,135,3205	0/0:10,0:10:30.10:0,30,599	0/0:46,0:23:60.66:0,61,1142	0/0:44,0:24:52.55:0,53,1108	1/1:3,18:21:8.72:149,9,0	0/0:18,0:18:32.87:0,33,455	0/0:25,0:25:54.70:0,55,884	0/0:26,0:25:66.19:0,66,1344	1/1:9,9:17:39.02:609,39,0	0/1:24,0:22:51.88:52,0,560	0/0:18,0:18:35.38:0,35,521	0/0:32,0:32:84.26:0,84,2085	0/0:22,0:22:54.06:0,54,1074	1/1:1,22:22:29.93:533,30,0	0/0:23,0:23:60.16:0,60,1151	0/0:16,0:16:39.12:0,39,806	1/1:13,0:13:17.88:163,18,0	1/1:14,0:14:32.96:230,33,0	0/1:21,0:21:44.68:45,0,541	0/0:11,0:11:24.03:0,24,370	0/1:46,0:46:74.78:75,0,1075	0/0:24,0:24:66.21:0,66,1595	0/0:16,0:16:39:0,39,846	0/0:45,0:45:99:0,117,2772	1/1:2,9:11:6.02:109,6,0	0/0:17,0:17:48.50:0,49,734	0/1:19,0:18:47.78:48,0,483	0/0:12,0:12:14.29:0,14,324
chr10	53967381	.	GCA	G	1810.08	PASS	AB=0.987;AC=22;AF=0.393;AN=56;BaseQRankSum=2.851;DP=660;FS=4.660;HRun=0;HaplotypeScore=134.3371;InbreedingCoeff=0.2529;MQ=62.75;MQ0=13;MQRankSum=-5.810;QD=5.86;ReadPosRankSum=-3.758;VQSLOD=2.1306;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,138,2285	0/0:11,0:11:33.05:0,33,499	0/0:46,0:23:60.18:0,60,870	0/0:44,0:24:52.76:0,53,800	1/1:20,0:21:8.67:83,9,0	0/1:19,0:19:16.26:16,0,114	0/1:24,0:24:24.56:25,0,356	0/0:25,0:24:66.18:0,66,1008	1/1:16,2:17:38.64:341,39,0	0/1:24,0:22:83.13:83,0,228	0/1:17,1:18:26.52:27,0,149	0/0:31,0:31:84.26:0,84,1499	0/0:21,0:21:53.46:0,53,813	1/1:22,1:22:29.80:310,30,0	0/0:23,0:23:60.16:0,60,891	0/0:16,0:16:39.12:0,39,603	1/1:4,8:12:18.06:235,18,0	1/1:9,6:14:36.01:440,36,0	0/1:20,0:20:99:101,0,183	0/1:10,0:10:4.04:4,0,99	0/1:45,0:45:99:141,0,359	0/0:24,0:24:65.17:0,65,1073	0/0:16,0:16:38.59:0,39,617	0/0:44,0:44:99:0,117,2008	1/1:10,1:11:6.01:60,6,0	0/1:18,0:18:6.28:6,0,250	0/1:19,0:18:74.03:74,0,89	0/1:11,1:12:43.08:54,0,43
chr10	53967389	.	GCA	G	87.92	PASS	AB=1.000;AC=16;AF=0.286;AN=56;BaseQRankSum=6.195;DP=647;FS=0.000;HRun=0;HaplotypeScore=145.2261;InbreedingCoeff=0.4278;MQ=54.89;MQ0=17;MQRankSum=-5.607;QD=0.52;ReadPosRankSum=2.148;VQSLOD=2.5638;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,1:45:76.59:0,77,1539	0/0:12,0:12:22.66:0,23,223	0/0:35,0:12:9:0,9,106	0/0:35,0:15:15.74:0,16,156	1/1:19,0:19:5.23:25,5,0	0/1:18,0:18:13:13,0,188	0/0:25,0:25:22.50:0,23,620	0/0:21,0:19:35.53:0,36,398	1/1:17,0:16:0.07:42,0,0	0/0:24,0:22:53.26:0,53,584	0/1:18,0:18:10.30:10,0,232	0/0:34,0:34:74.60:0,75,1133	0/0:18,5:23:4.65:0,5,553	1/1:23,0:21:12.52:56,13,0	0/0:28,0:28:28.39:0,28,333	0/0:19,0:19:21.97:0,22,203	1/1:9,0:13:2.50:33,2,0	1/1:16,0:16:2.30:12,2,0	0/0:15,0:15:32.46:0,32,342	0/0:14,0:14:17.19:0,17,126	0/0:41,0:41:52.90:0,53,638	0/1:23,0:23:21.46:21,0,550	0/0:18,0:17:29.03:0,29,331	0/0:45,1:45:64.72:0,65,1390	1/1:10,0:10:3.68:16,4,0	0/0:25,0:25:38.19:0,38,559	0/0:17,0:15:11.47:0,11,139	0/1:12,0:12:17.05:17,0,83
chr10	53967405	.	GCA	G	2293	PASS	AB=0.878;AC=33;AF=0.589;AN=56;BaseQRankSum=7.464;DP=652;FS=2.865;HRun=0;HaplotypeScore=141.1418;InbreedingCoeff=0.1663;MQ=51.20;MQ0=16;MQRankSum=-2.556;QD=5.08;ReadPosRankSum=2.892;VQSLOD=3.2685;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:27.04:0,27,731	0/1:6,0:13:3.32:38,0,3	0/0:28,0:6:8.99:0,9,81	0/0:24,0:5:0:0,0,0	0/1:22,0:22:4.95:5,0,82	1/1:10,11:21:10.25:109,10,0	0/1:16,7:24:27.70:132,0,28	0/1:20,0:18:9.21:9,0,214	0/1:19,0:19:23.73:24,0,54	1/1:15,9:25:5.88:226,6,0	1/1:9,7:16:14.49:143,14,0	0/0:30,0:30:28.87:0,29,824	0/0:25,0:25:44.16:0,44,603	0/1:26,0:25:33.74:34,0,35	1/1:14,0:35:17.45:92,17,0	1/1:4,0:18:11.36:56,11,0	1/1:15,1:16:12.80:66,13,0	1/1:17,0:16:0.76:10,1,0	1/1:8,5:13:10.84:105,11,0	1/1:4,12:16:15.04:170,15,0	0/1:31,5:37:0.47:405,0,0	0/1:22,2:24:55.74:56,0,301	0/1:15,1:16:27.81:28,0,181	0/0:46,0:45:7.49:0,7,784	0/1:14,0:14:5.57:6,0,70	1/1:13,14:27:36.52:368,37,0	1/1:8,12:19:21.94:268,22,0	0/1:3,4:7:30.63:118,0,31
chr10	53967923	.	A	AATAAG	19985.55	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=-9.022;DP=474;FS=4.322;HRun=0;HaplotypeScore=74.6397;InbreedingCoeff=0.9852;MQ=67.63;MQ0=0;MQRankSum=-7.345;QD=70.62;ReadPosRankSum=2.308;VQSLOD=5.9184;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:65.58:0,66,1276	0/0:10,0:10:30.07:0,30,546	0/0:7,0:7:20.95:0,21,291	0/0:9,0:8:14.85:0,15,210	1/1:2,19:21:54.19:1585,54,0	1/1:2,14:17:39.13:1196,39,0	1/1:1,4:8:12.04:367,12,0	0/0:22,0:22:60.21:0,60,1214	1/1:3,18:21:45.15:1377,45,0	1/1:5,19:26:71.38:1870,71,0	1/1:2,7:10:15.05:433,15,0	0/0:20,0:20:57.19:0,57,1146	0/0:22,0:22:63.22:0,63,1238	1/1:3,15:19:48.16:1462,48,0	0/0:19,0:19:54.18:0,54,1062	0/0:17,0:17:51.16:0,51,963	1/1:3,11:15:39.13:1153,39,0	1/1:0,5:6:12.04:368,12,0	1/1:6,11:18:51.16:1443,51,0	1/1:6,18:26:66.23:1932,66,0	1/1:1,9:11:24.08:721,24,0	0/0:9,0:9:27.09:0,27,559	0/0:17,0:17:48.15:0,48,910	0/0:15,0:15:42.11:0,42,758	1/1:0,16:21:45.15:1376,45,0	1/1:3,21:27:75.23:1949,75,0	1/1:2,24:28:69.24:2111,69,0	1/1:1,7:8:21.07:644,21,0
chr10	53968601	.	AT	A	5616.85	PASS	AB=0.797;AC=29;AF=0.518;AN=56;BaseQRankSum=11.972;DP=569;FS=15.741;HRun=11;HaplotypeScore=57.2994;InbreedingCoeff=0.7823;MQ=72.15;MQ0=0;MQRankSum=-0.084;QD=17.83;ReadPosRankSum=2.423;VQSLOD=4.4542;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:87.19:0,87,918	0/0:14,0:14:39.09:0,39,408	0/1:13,1:13:5.43:5,0,135	0/0:8,0:10:8.91:0,9,72	1/1:3,22:26:61.95:498,62,0	1/1:2,20:22:59.93:493,60,0	1/1:5,14:19:41.93:345,42,0	0/0:29,0:29:75.17:0,75,787	1/1:1,14:15:41.95:345,42,0	1/1:8,28:37:56.93:664,57,0	1/1:1,16:17:44.93:369,45,0	0/0:22,0:22:54.07:0,54,543	0/0:27,2:29:31.90:0,32,736	1/1:1,20:21:50.94:419,51,0	0/0:16,0:17:41.94:0,42,430	0/0:21,3:24:10.76:0,11,503	0/0:25,0:27:74.86:0,75,764	0/0:24,0:25:56.96:0,57,582	1/1:8,18:27:55.95:449,56,0	0/1:3,5:9:33.93:106,0,34	1/1:0,4:4:11.99:99,12,0	0/0:9,0:9:24.01:0,24,238	0/1:10,2:12:16.22:16,0,248	0/0:12,1:13:14.45:0,14,359	1/1:1,15:16:38.95:320,39,0	1/1:4,24:28:71.90:591,72,0	1/1:5,25:32:69.98:553,70,0	1/1:2,14:16:41.94:345,42,0
chr10	53968944	.	T	TC	1697.14	PASS	AB=1.000;AC=26;AF=0.464;AN=56;BaseQRankSum=5.117;DP=487;FS=2.078;HRun=4;HaplotypeScore=73.2828;InbreedingCoeff=0.1561;MQ=78.30;MQ0=0;MQRankSum=-0.666;QD=5.87;ReadPosRankSum=1.767;VQSLOD=0.1472;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,108,1151	1/1:1,16:17:32.91:450,33,0	0/0:18,0:17:10.53:0,11,189	0/1:14,0:14:6.05:6,0,155	0/1:17,0:17:43.08:43,0,91	0/1:17,0:17:24.06:70,0,24	0/1:18,0:18:39.35:39,0,42	0/1:24,0:24:32.61:33,0,122	0/1:13,0:13:8.65:28,0,9	0/1:15,0:15:30.41:30,0,49	0/1:13,0:13:26.38:65,0,26	0/0:22,0:22:55.96:0,56,636	0/0:18,0:18:54.11:0,54,582	0/1:22,0:22:62.73:63,0,88	1/1:0,13:13:30.10:409,30,0	1/1:0,8:8:18.06:244,18,0	0/0:34,0:34:74.77:0,75,349	0/0:19,0:19:44.39:0,44,233	0/1:21,0:20:14.65:53,0,15	0/1:8,0:8:6.44:32,0,6	1/1:15,0:15:7.31:71,7,0	0/0:11,0:11:29.94:0,30,297	0/0:17,0:17:45.13:0,45,508	0/0:23,0:23:63.12:0,63,675	1/1:9,0:9:14.45:45,14,0	0/1:18,0:18:32.76:45,0,33	1/1:14,0:14:23.71:87,24,0	1/1:13,0:13:21.27:75,21,0
chr10	53968948	.	C	CA	6488.26	PASS	AB=0.864;AC=38;AF=0.679;AN=56;BaseQRankSum=-3.464;DP=501;FS=5.721;HRun=9;HaplotypeScore=65.0564;InbreedingCoeff=0.7332;MQ=76.45;MQ0=0;MQRankSum=-1.338;QD=18.07;ReadPosRankSum=-0.054;VQSLOD=4.8535;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:89.96:0,90,781	0/1:18,0:18:6.40:135,0,6	0/0:16,0:15:15.71:0,16,169	0/1:11,0:14:0.26:0,0,70	0/1:5,13:18:13.04:311,0,13	1/1:4,15:19:39.11:431,39,0	1/1:3,13:16:30.08:332,30,0	1/1:7,16:24:22.54:465,23,0	1/1:1,14:15:21.06:232,21,0	1/1:2,16:18:42.08:445,42,0	1/1:2,12:14:33.01:337,33,0	0/0:20,2:22:17.80:0,18,383	0/0:18,0:18:44.96:0,45,386	1/1:5,16:22:41.95:446,42,0	0/1:15,0:15:9.02:117,0,9	1/1:8,0:8:17.33:103,17,0	1/1:6,0:38:88.97:457,89,0	1/1:4,0:19:34.33:173,34,0	1/1:4,16:19:48.09:511,48,0	1/1:1,7:8:18.05:199,18,0	1/1:1,15:16:39.11:431,39,0	0/0:11,0:12:29:0,29,236	0/0:16,0:16:44.99:0,45,390	0/0:22,0:22:62.94:0,63,539	1/1:0,9:9:21.06:232,21,0	1/1:3,15:19:47.94:501,48,0	1/1:1,14:15:29.70:331,30,0	1/1:0,14:14:27.07:299,27,0
chr10	53969753	.	AC	A	1035.34	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.165;DP=428;FS=4.773;HRun=5;HaplotypeScore=38.8812;InbreedingCoeff=0.9730;MQ=96.31;MQ0=0;MQRankSum=-0.930;QD=29.58;ReadPosRankSum=-0.053;VQSLOD=3.3680;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:99:0,99,1300	0/0:5,0:5:15.05:0,15,205	0/0:23,0:23:62.18:0,62,798	0/0:18,0:18:51.17:0,51,690	0/0:14,0:14:42.13:0,42,558	0/0:20,0:20:57.15:0,57,755	0/0:7,0:7:21.07:0,21,287	0/0:23,0:23:66.21:0,66,888	0/0:6,0:6:15.05:0,15,205	0/0:15,0:15:45.15:0,45,615	0/0:19,0:19:54.18:0,54,736	0/0:7,0:7:21.05:0,21,269	0/0:12,0:12:36.12:0,36,492	0/0:15,0:15:45.15:0,45,615	0/0:9,0:9:27.09:0,27,369	0/0:9,0:9:24.08:0,24,328	1/1:0,21:21:63.18:715,63,0	1/1:0,14:14:39.11:442,39,0	0/0:13,0:13:33.09:0,33,424	0/0:17,0:17:51.17:0,51,697	0/0:13,0:13:39.13:0,39,531	0/0:8,0:8:24.08:0,24,328	0/0:17,0:17:51.17:0,51,687	0/0:6,0:6:18.06:0,18,246	0/0:18,0:18:51.16:0,51,683	0/0:23,0:23:69.23:0,69,942	0/0:17,0:17:51.15:0,51,660	0/0:26,0:26:78.26:0,78,1067
chr10	53969909	.	G	GA	1400.41	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-6.939;DP=483;FS=8.215;HRun=7;HaplotypeScore=45.5965;InbreedingCoeff=0.9630;MQ=81.33;MQ0=0;MQRankSum=-3.876;QD=28.01;ReadPosRankSum=1.229;VQSLOD=4.0546;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:86.85:0,87,817	0/0:4,0:4:12.02:0,12,116	0/0:14,0:14:14.38:0,14,345	0/0:15,0:15:26.57:0,27,231	0/0:12,0:12:30.05:0,30,289	0/0:14,0:14:36.04:0,36,338	0/0:10,0:10:27.04:0,27,260	0/0:41,0:41:93.14:0,93,898	0/0:10,0:10:27.04:0,27,260	0/0:20,0:20:60.10:0,60,579	0/0:17,0:17:48.08:0,48,464	0/0:11,0:11:33.05:0,33,318	0/0:16,0:16:45.07:0,45,435	0/0:22,0:22:63.10:0,63,608	0/0:22,0:22:63.09:0,63,603	0/0:14,0:14:36.06:0,36,348	1/1:4,19:23:48.15:580,48,0	1/1:1,26:27:78.24:942,78,0	0/0:12,0:12:30.03:0,30,285	0/0:17,0:17:42.06:0,42,406	0/0:17,0:17:48.08:0,48,463	0/0:6,0:6:15.02:0,15,145	0/0:13,0:13:39.06:0,39,376	0/0:9,0:9:24.02:0,24,225	0/0:26,0:26:71.96:0,72,671	0/0:22,0:22:60.08:0,60,574	0/0:27,0:27:78.10:0,78,746	0/0:8,0:8:24.04:0,24,232
chr10	53970188	.	T	TA	985.82	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-6.369;DP=498;FS=7.095;HRun=7;HaplotypeScore=52.8616;InbreedingCoeff=0.9883;MQ=80.50;MQ0=0;MQRankSum=-0.872;QD=29.87;ReadPosRankSum=1.294;VQSLOD=4.1792;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:60.09:0,60,579	0/0:7,0:7:18.01:0,18,167	0/0:13,0:13:30.03:0,30,282	0/0:12,0:12:26.79:0,27,260	0/0:19,0:19:54.08:0,54,521	0/0:23,0:23:60.09:0,60,579	0/0:13,0:13:39.06:0,39,377	0/0:25,0:25:57.08:0,57,546	0/0:14,0:14:42.06:0,42,400	0/0:21,0:21:57.08:0,57,550	0/0:28,0:28:78.11:0,78,748	0/0:15,0:15:39.05:0,39,370	0/0:16,0:16:45.07:0,45,435	0/0:13,0:13:36.05:0,36,348	0/0:20,0:20:51.08:0,51,493	0/0:21,0:21:60.08:0,60,574	1/1:0,18:18:51.16:616,51,0	1/1:1,14:15:42.10:492,42,0	0/0:23,0:23:66.09:0,66,629	0/0:28,0:28:66.08:0,66,631	0/0:6,0:6:18.01:0,18,167	0/0:7,0:7:21.03:0,21,203	0/0:20,0:20:57.09:0,57,550	0/0:10,0:10:30.05:0,30,290	0/0:17,0:17:51.08:0,51,493	0/0:30,0:30:78.12:0,78,753	0/0:22,0:22:60.05:0,60,562	0/0:20,0:20:60.10:0,60,579
chr10	53972584	.	G	GAC	1061.86	PASS	AB=0.834;AC=19;AF=0.365;AN=52;BaseQRankSum=-0.530;DP=529;FS=2.496;HRun=0;HaplotypeScore=97.1261;InbreedingCoeff=0.2714;MQ=63.05;MQ0=10;MQRankSum=0.094;QD=4.32;ReadPosRankSum=-2.893;VQSLOD=2.2213;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:36:23.03:0,23,261	0/0:4,0:8:8.43:0,8,39	./.	./.	0/0:6,0:12:8.48:0,8,41	0/1:14,2:17:29.76:30,0,97	1/1:15,3:18:2.99:45,3,0	0/1:23,0:22:60.59:61,0,71	0/0:11,0:17:11.31:0,11,65	1/1:17,2:19:6.02:89,6,0	0/1:6,3:10:35.61:36,0,56	0/0:19,0:19:16.81:0,17,149	0/0:18,0:18:20.72:0,21,228	0/0:10,0:19:8.52:0,9,42	0/0:15,0:20:5.54:0,6,35	0/0:7,0:13:14.04:0,14,67	1/1:29,0:26:25.07:219,25,0	0/1:13,0:22:8.92:100,0,9	0/1:10,5:15:19.35:124,0,19	0/1:11,6:18:23.61:80,0,24	1/1:25,7:31:5.71:89,6,0	0/0:12,0:12:15.04:0,15,163	0/0:13,0:14:14.75:0,15,144	0/0:15,0:16:14.74:0,15,144	0/0:12,0:23:13.83:0,14,66	0/1:19,0:19:47.21:136,0,47	1/1:9,3:12:9.97:135,10,0	1/1:9,1:10:6.02:89,6,0
chr10	53975165	.	CTTGTTTTT	C	5860.87	PASS	AB=1.000;AC=30;AF=0.536;AN=56;BaseQRankSum=1.643;DP=460;FS=0.986;HRun=0;HaplotypeScore=131.1982;InbreedingCoeff=0.5702;MQ=74.78;MQ0=14;MQRankSum=-4.673;QD=23.35;ReadPosRankSum=4.069;VQSLOD=4.3831;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:29.73:0,30,918	0/0:2,0:2:2.79:0,3,13	0/0:59,0:22:17.29:0,17,302	0/1:44,0:13:27.87:28,0,140	1/1:12,0:12:29.91:422,30,0	1/1:12,0:11:27.01:324,27,0	1/1:18,0:18:38.72:415,39,0	0/0:31,0:30:56.94:0,57,580	1/1:10,0:10:27.09:541,27,0	1/1:11,0:10:21.01:247,21,0	1/1:8,2:10:21.07:394,21,0	0/0:14,0:14:30.04:0,30,532	0/0:23,0:21:26.87:0,27,828	1/1:12,0:12:24.04:444,24,0	0/1:11,0:11:26.69:27,0,66	0/1:10,0:10:62.64:69,0,63	0/0:19,0:18:3.73:0,4,104	0/1:17,0:17:48.03:48,0,130	0/1:17,0:17:4.08:284,0,4	1/1:11,1:12:24.05:335,24,0	0/1:3,0:3:0:0,0,0	0/0:10,0:10:17.98:0,18,521	0/0:19,0:19:45.06:0,45,1335	0/0:13,0:13:20.99:0,21,443	1/1:15,0:15:39.09:819,39,0	1/1:14,3:16:27.83:513,28,0	1/1:7,8:15:36.05:799,36,0	1/1:5,0:4:6.02:154,6,0
chr10	53975168	.	GTTTTTTTGTT	G	4830.65	PASS	AB=0.971;AC=27;AF=0.482;AN=56;BaseQRankSum=2.297;DP=458;FS=7.691;HRun=0;HaplotypeScore=144.5876;InbreedingCoeff=0.3734;MQ=68.13;MQ0=17;MQRankSum=-5.747;QD=20.38;ReadPosRankSum=5.576;VQSLOD=2.5242;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:23.97:0,24,1416	0/0:2,0:2:3.01:0,3,38	0/0:62,0:19:33.64:0,34,405	0/1:47,0:11:7.32:7,0,144	1/1:7,4:11:33.01:640,33,0	1/1:12,0:11:12.08:131,12,0	0/1:14,0:15:13.26:149,0,13	0/0:30,0:29:63.97:0,64,943	1/1:3,7:10:27.09:754,27,0	0/1:11,0:10:5.46:113,0,5	1/1:8,0:9:3.62:179,4,0	0/0:14,0:14:36.09:0,36,878	0/0:21,0:19:29.97:0,30,1137	1/1:6,5:11:23.98:610,24,0	0/1:9,0:9:7.56:8,0,139	0/1:9,0:9:37.11:37,0,158	0/0:23,0:22:17.85:0,18,227	0/1:18,0:18:8.30:8,0,360	0/1:13,1:14:67.54:210,0,68	1/1:9,0:9:6.21:153,6,0	0/1:2,0:2:0:0,0,0	0/0:13,0:13:33.09:0,33,1160	0/0:18,0:18:45.09:0,45,1657	0/0:16,0:16:27.03:0,27,748	1/1:5,7:15:39.09:1046,39,0	0/1:14,1:14:21.30:288,0,21	1/1:13,0:13:36.04:419,36,0	1/1:5,0:4:6.02:78,6,0
chr10	53975169	.	TTTTTTTG	T	5790.20	PASS	AB=1.000;AC=32;AF=0.571;AN=56;BaseQRankSum=2.711;DP=464;FS=5.559;HRun=0;HaplotypeScore=119.3043;InbreedingCoeff=0.5763;MQ=66.47;MQ0=19;MQRankSum=-5.233;QD=22.27;ReadPosRankSum=4.741;VQSLOD=3.9206;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:20:41.74:0,42,970	0/0:2,0:2:5.75:0,6,44	0/0:67,0:18:8.88:0,9,272	0/1:49,0:11:13.47:13,0,132	1/1:12,0:11:29.25:370,29,0	1/1:8,4:11:27.04:451,27,0	1/1:13,2:15:40.18:481,40,0	0/0:31,0:30:47.98:0,48,461	1/1:10,0:10:27.09:489,27,0	1/1:6,4:9:22.30:332,22,0	1/1:7,2:9:21.07:448,21,0	0/0:14,0:14:36.05:0,36,594	0/0:20,0:18:29.82:0,30,792	1/1:11,0:11:26.07:410,26,0	0/1:10,0:10:30.16:30,0,57	0/1:9,0:9:14.48:102,0,14	0/1:24,0:23:17.53:18,0,59	0/1:19,0:19:88.32:88,0,184	1/1:13,0:12:19.09:283,19,0	1/1:9,0:9:24.01:276,24,0	0/1:2,0:2:0:0,0,0	0/0:14,0:14:36.03:0,36,854	0/0:20,0:20:51.05:0,51,1300	0/0:16,0:16:26.97:0,27,522	1/1:15,0:15:39.09:751,39,0	1/1:15,0:14:33.47:477,33,0	1/1:13,0:13:36.05:647,36,0	1/1:2,1:2:6.02:123,6,0
chr10	53975170	.	TTTTTTG	T	5398.29	PASS	AB=0.994;AC=31;AF=0.554;AN=56;BaseQRankSum=3.970;DP=475;FS=6.420;HRun=0;HaplotypeScore=114.8007;InbreedingCoeff=0.5475;MQ=63.81;MQ0=22;MQRankSum=-5.367;QD=20.45;ReadPosRankSum=5.360;VQSLOD=3.4832;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:42.92:0,43,877	0/0:3,0:3:2.03:0,2,16	0/0:69,0:16:17.93:0,18,265	0/1:52,0:11:10.28:10,0,121	1/1:12,0:11:27.81:322,28,0	1/1:10,0:9:27.01:367,27,0	1/1:13,2:15:40.70:473,41,0	0/0:31,0:30:25.31:0,25,270	1/1:10,0:10:27.08:440,27,0	1/1:9,1:9:22.87:313,23,0	1/1:9,0:9:21.07:375,21,0	0/0:15,0:15:39.03:0,39,540	0/0:19,0:17:29.75:0,30,692	1/1:11,0:11:26.76:379,27,0	0/1:11,0:11:5.80:58,0,6	0/1:11,0:11:1.72:133,0,2	0/1:23,0:23:17.43:63,0,17	0/1:20,1:21:96.71:150,0,97	0/1:14,0:12:15.16:240,0,15	1/1:9,0:9:23.90:250,24,0	0/1:2,0:2:0:0,0,0	0/0:14,0:14:36.01:0,36,720	0/0:22,0:22:56.52:0,57,1186	0/0:16,0:16:26.95:0,27,449	1/1:13,0:13:39.09:685,39,0	1/1:14,0:13:35.49:442,35,0	1/1:13,0:13:36.05:588,36,0	1/1:4,0:2:6.02:112,6,0
chr10	53975172	.	TTTTG	T	5286.02	PASS	AB=1.000;AC=38;AF=0.679;AN=56;BaseQRankSum=4.181;DP=484;FS=0.000;HRun=0;HaplotypeScore=104.3828;InbreedingCoeff=0.7200;MQ=60.61;MQ0=23;MQRankSum=-5.827;QD=17.22;ReadPosRankSum=2.851;VQSLOD=3.9325;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:20.96:0,21,516	1/1:4,0:4:5.77:26,6,0	0/0:73,0:19:9.90:0,10,217	0/1:55,0:11:3.83:4,0,128	1/1:12,0:11:26.31:271,26,0	1/1:11,0:10:26.40:289,26,0	1/1:16,0:16:26.16:355,26,0	0/1:29,0:28:93.11:248,0,93	1/1:9,0:9:27.05:334,27,0	1/1:11,0:10:25.76:263,26,0	1/1:10,0:10:24.91:305,25,0	0/0:16,0:16:40.61:0,41,371	0/0:15,0:13:31.57:0,32,484	1/1:10,0:10:26.94:303,27,0	1/1:10,1:11:20.81:200,21,0	1/1:14,0:14:37.41:323,37,0	1/1:19,2:21:16.96:162,17,0	1/1:21,1:22:19.67:327,20,0	0/1:13,0:12:20.82:208,0,21	1/1:10,0:10:23.58:208,24,0	0/1:1,0:1:0:0,0,0	0/0:15,0:15:31.48:0,31,449	0/0:20,0:20:55.87:0,56,853	0/0:17,0:17:26.87:0,27,327	1/1:13,0:13:39.08:515,39,0	1/1:14,0:13:30.39:351,30,0	1/1:13,0:13:36.05:463,36,0	1/1:6,0:4:11.86:130,12,0
chr10	53975173	.	TTTG	T	5053.27	PASS	AB=1.000;AC=37;AF=0.685;AN=54;BaseQRankSum=3.877;DP=497;FS=5.405;HRun=0;HaplotypeScore=104.5562;InbreedingCoeff=0.7050;MQ=60.03;MQ0=24;MQRankSum=-6.130;QD=15.84;ReadPosRankSum=1.527;VQSLOD=4.4803;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:9.13:0,9,378	1/1:4,0:4:10.02:57,10,0	0/0:74,0:18:9.03:0,9,186	0/1:58,0:12:19.12:19,0,93	1/1:12,1:12:22.30:241,22,0	1/1:12,0:11:27.87:271,28,0	1/1:16,0:16:26.09:324,26,0	0/1:29,0:28:93.49:110,0,93	1/1:9,0:9:26.64:276,27,0	1/1:11,0:10:23.83:251,24,0	1/1:10,0:10:26.85:270,27,0	0/0:16,0:16:37.91:0,38,305	0/0:14,0:12:26.21:0,26,359	1/1:9,0:9:26.73:268,27,0	1/1:10,1:11:25.06:248,25,0	1/1:12,2:14:40.44:382,40,0	1/1:19,2:21:17.96:187,18,0	1/1:23,1:24:56.28:501,56,0	0/1:17,0:14:32.28:192,0,32	1/1:12,0:12:25.87:204,26,0	./.	0/0:15,0:15:28.33:0,28,356	0/0:20,0:20:30.60:0,31,653	0/0:17,0:17:25.76:0,26,248	1/1:13,0:13:39.07:442,39,0	1/1:15,0:14:16.66:305,17,0	1/1:15,0:15:21.43:384,21,0	1/1:6,0:4:11.86:122,12,0
chr10	53975174	.	TTG	T	4751.04	PASS	AB=1.000;AC=38;AF=0.704;AN=54;BaseQRankSum=3.816;DP=509;FS=10.381;HRun=0;HaplotypeScore=100.7931;InbreedingCoeff=0.5908;MQ=60.76;MQ0=24;MQRankSum=-5.143;QD=13.46;ReadPosRankSum=0.395;VQSLOD=4.2127;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:22:26.39:26,0,279	1/1:4,0:4:11.78:75,12,0	0/0:75,0:19:6.93:0,7,167	0/1:60,0:13:25.19:25,0,67	1/1:14,0:13:26.85:217,27,0	1/1:12,0:11:28.96:242,29,0	1/1:16,0:16:29.90:329,30,0	0/1:30,0:29:38.24:38,0,122	1/1:9,0:9:26.26:221,26,0	1/1:12,0:11:16.17:236,16,0	1/1:10,0:10:26.45:226,26,0	0/0:16,0:16:22.63:0,23,241	0/0:14,0:12:25.06:0,25,269	1/1:9,0:9:25.97:214,26,0	1/1:10,1:11:26.85:230,27,0	1/1:14,0:14:41.85:359,42,0	1/1:7,14:21:18.01:200,18,0	1/1:23,1:24:64.59:549,65,0	0/1:19,0:16:34.36:179,0,34	1/1:15,0:15:31.95:246,32,0	./.	0/0:15,0:15:5.91:0,6,255	0/0:20,0:20:27.72:0,28,481	0/0:16,0:16:25.62:0,26,203	1/1:14,0:14:41.96:382,42,0	1/1:15,0:14:17.34:289,17,0	1/1:16,0:16:27.24:359,27,0	1/1:6,0:4:11.85:108,12,0
chr10	53975175	.	TG	T	4359.04	PASS	AB=0.995;AC=40;AF=0.741;AN=54;BaseQRankSum=2.955;DP=525;FS=13.713;HRun=1;HaplotypeScore=101.6165;InbreedingCoeff=0.4445;MQ=58.25;MQ0=27;MQRankSum=-3.908;QD=10.92;ReadPosRankSum=-0.307;VQSLOD=1.6601;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:22:73.84:74,0,210	1/1:4,0:4:11.87:80,12,0	0/0:75,2:18:6.17:0,6,162	0/1:60,2:12:23.84:24,0,55	1/1:13,1:13:28.66:204,29,0	1/1:12,1:12:29.06:215,29,0	1/1:17,0:17:29.54:307,30,0	0/1:30,0:29:7.13:7,0,162	1/1:9,0:9:26.72:190,27,0	1/1:17,0:14:9.50:212,9,0	1/1:10,1:11:26.80:196,27,0	0/1:16,0:16:0.15:0,0,168	0/0:13,0:11:18.63:0,19,188	1/1:9,0:9:23.87:178,24,0	1/1:10,1:11:26.85:211,27,0	1/1:14,0:14:41.66:324,42,0	1/1:20,1:21:17.97:154,18,0	1/1:23,1:24:65.32:522,65,0	0/1:19,0:16:26.37:190,0,26	1/1:13,2:15:32.14:264,32,0	./.	0/1:15,0:15:26.37:26,0,180	0/0:20,0:20:13.41:0,13,353	0/0:16,0:16:20.92:0,21,147	1/1:15,0:15:41.62:308,42,0	1/1:16,1:16:14.41:271,14,0	1/1:16,1:17:27.13:308,27,0	1/1:6,1:5:8.27:93,8,0
chr10	53975221	.	C	CTT	3014.15	PASS	AB=0.794;AC=34;AF=0.607;AN=56;BaseQRankSum=2.290;DP=533;FS=2.763;HRun=10;HaplotypeScore=116.9818;InbreedingCoeff=0.8095;MQ=69.33;MQ0=7;MQRankSum=-0.958;QD=8.94;ReadPosRankSum=1.307;VQSLOD=1.4027;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:59.90:0,60,585	1/1:1,0:4:0.68:25,1,0	0/0:53,0:27:17.15:0,17,193	0/1:51,0:27:7.89:8,0,105	1/1:7,15:25:53.11:700,53,0	1/1:5,0:12:17.47:62,17,0	1/1:2,0:10:14.97:53,15,0	0/0:19,0:19:36.01:0,36,360	1/1:6,5:11:15.05:224,15,0	1/1:5,0:23:35.08:129,35,0	1/1:8,1:22:35.65:168,36,0	0/0:10,0:10:24.04:0,24,243	0/0:14,0:13:8.98:0,9,199	1/1:5,12:17:24.08:358,24,0	1/1:4,1:13:12.02:114,12,0	1/1:11,0:17:22.81:289,23,0	0/0:14,0:14:14.94:0,15,148	0/0:17,0:18:41.79:0,42,408	1/1:8,1:23:37.82:168,38,0	1/1:3,0:22:51.92:182,52,0	1/1:0,0:1:2.50:9,2,0	0/0:16,0:16:36.01:0,36,359	0/0:17,0:18:32.61:0,33,310	0/0:9,0:9:11.99:0,12,122	1/1:17,7:25:27.08:383,27,0	1/1:6,1:24:48.57:216,49,0	0/1:6,0:20:0.46:66,0,0	1/1:5,0:15:19.96:71,20,0
chr10	53976757	.	T	TA	5342.91	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-14.369;DP=600;FS=13.422;HRun=8;HaplotypeScore=55.3981;InbreedingCoeff=0.9873;MQ=78.87;MQ0=0;MQRankSum=-1.054;QD=28.27;ReadPosRankSum=1.558;VQSLOD=4.3387;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:48.03:0,48,439	1/1:0,9:9:24.07:274,24,0	0/0:23,0:23:49.19:0,49,429	0/0:6,0:6:9:0,9,82	1/1:6,33:39:99:1135,99,0	0/0:28,1:29:37.41:0,37,596	0/0:9,0:9:18:0,18,164	0/0:36,0:36:96.01:0,96,866	1/1:2,12:14:33.10:381,33,0	0/0:29,0:29:87.05:0,87,796	0/0:28,0:28:78.04:0,78,714	0/0:22,0:22:63.02:0,63,572	0/0:30,0:30:78.28:0,78,785	1/1:1,13:14:33.10:381,33,0	1/1:3,9:12:27.08:312,27,0	1/1:1,18:19:57.15:646,57,0	1/1:3,23:26:60.18:692,60,0	1/1:4,14:18:39.12:450,39,0	0/0:11,0:11:24:0,24,219	0/0:31,0:31:87.04:0,87,794	0/0:13,0:13:36.02:0,36,330	0/0:11,0:11:29.96:0,30,263	0/0:22,0:23:65.07:0,65,583	0/0:11,0:11:33.02:0,33,302	1/1:3,35:38:93:1072,93,0	0/0:39,0:39:99:0,105,961	0/0:37,0:37:99:0,105,954	0/0:7,0:7:18.01:0,18,164
chr10	53977043	.	TA	T	2457.69	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.949;DP=760;FS=3.680;HRun=1;HaplotypeScore=72.6883;InbreedingCoeff=0.9985;MQ=88.95;MQ0=0;MQRankSum=-4.371;QD=36.68;ReadPosRankSum=2.763;VQSLOD=4.3445;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,114,1769	1/1:0,10:10:24.08:336,24,0	0/0:26,0:26:75.22:0,75,1115	0/0:30,0:30:84.18:0,84,1231	0/0:26,0:26:75.26:0,75,1198	0/0:25,0:25:75.24:0,75,1176	0/0:23,0:23:69.22:0,69,1075	0/0:39,0:39:99:0,117,1830	0/0:23,0:23:69.22:0,69,1076	0/0:31,0:31:87.27:0,87,1347	0/0:23,0:23:66.20:0,66,1009	0/0:39,0:39:99:0,117,1772	0/0:32,0:32:93.32:0,93,1484	0/0:35,0:35:99:0,105,1674	1/1:0,30:30:87.29:1216,87,0	1/1:0,27:27:75.25:1049,75,0	0/0:29,0:28:87.25:0,87,1320	0/0:16,0:16:42.14:0,42,667	0/0:13,0:13:39.12:0,39,603	0/0:30,0:30:90.31:0,90,1438	0/0:32,0:32:96.31:0,96,1511	0/0:32,0:32:96.27:0,96,1440	0/0:32,0:32:93.32:0,93,1485	0/0:15,0:15:45.14:0,45,695	0/0:26,0:26:75.20:0,75,1107	0/0:31,0:31:93.30:0,93,1443	0/0:39,0:39:99:0,117,1819	0/0:8,0:8:24.08:0,24,383
chr10	53977628	.	T	TAC	867.49	PASS	AB=0.841;AC=19;AF=0.365;AN=52;BaseQRankSum=-0.239;DP=558;FS=4.569;HRun=0;HaplotypeScore=93.0022;InbreedingCoeff=0.0880;MQ=64.16;MQ0=14;MQRankSum=0.479;QD=3.27;ReadPosRankSum=0.960;VQSLOD=1.9418;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:33:27.93:0,28,254	1/1:9,0:9:1.36:3,1,0	./.	./.	0/0:8,0:10:2.84:0,3,14	0/1:11,4:16:26.50:39,0,26	0/1:13,7:23:26.47:26,0,109	0/1:28,0:28:14.95:15,0,17	0/0:14,0:22:7.66:0,8,34	0/1:12,0:11:26.52:27,0,84	0/1:11,3:15:71.94:72,0,75	0/0:19,0:20:34.26:0,34,302	0/0:21,0:24:28.69:0,29,251	0/0:6,0:13:5.81:0,6,23	0/0:12,0:18:5.68:0,6,28	0/0:11,0:21:14.08:0,14,69	1/1:20,0:34:11.73:109,12,0	0/1:16,0:21:25.23:72,0,25	1/1:12,1:13:5.50:50,6,0	0/1:11,3:15:16.50:127,0,16	0/1:32,2:32:99:128,0,100	0/0:26,0:26:16.95:0,17,352	0/0:16,0:16:23.97:0,24,229	0/0:36,0:38:44.67:0,45,420	0/0:4,0:13:8.52:0,9,42	1/1:14,0:14:4.12:114,4,0	0/1:15,5:21:30.59:81,0,31	1/1:5,3:8:13.28:166,13,0
chr10	53980087	.	CGTGTGT	C	1280.31	PASS	AB=0.774;AC=26;AF=0.500;AN=52;BaseQRankSum=6.552;DP=595;FS=8.477;HRun=0;HaplotypeScore=125.1690;InbreedingCoeff=0.5761;MQ=70.00;MQ0=17;MQRankSum=-3.709;QD=5.62;ReadPosRankSum=2.654;VQSLOD=1.8547;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:43:33.88:0,34,991	1/1:6,1:9:4.78:64,5,0	./.	./.	0/0:6,0:13:12.62:0,13,220	1/1:7,5:12:9.03:182,9,0	1/1:19,5:26:11.01:204,11,0	1/1:18,0:18:0.47:1,0,0	0/0:13,0:12:6.02:0,6,158	1/1:10,5:14:8.94:135,9,0	1/1:9,4:14:6.02:103,6,0	0/0:33,0:33:36.12:0,36,855	0/0:26,0:27:38.89:0,39,842	0/0:14,0:26:14.48:0,14,358	0/0:16,0:21:1.11:0,1,39	0/1:15,3:25:9.05:174,0,9	0/1:16,2:20:49.55:111,0,50	1/1:10,0:13:2.66:5,3,0	0/0:9,0:9:0.47:0,0,1	1/1:4,8:12:9.03:182,9,0	1/1:23,0:23:3:57,3,0	0/0:24,0:24:34.06:0,34,816	0/0:17,0:16:24.07:0,24,478	0/0:37,0:40:60.19:0,60,1346	0/0:21,0:22:41.97:0,42,1048	1/1:13,0:13:6:85,6,0	1/1:14,4:18:3.01:61,3,0	1/1:8,0:10:6.02:90,6,0
chr10	53980746	.	G	GT	1517.26	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-10.034;DP=641;FS=0.522;HRun=9;HaplotypeScore=67.2166;InbreedingCoeff=0.9867;MQ=82.39;MQ0=0;MQRankSum=-0.607;QD=24.08;ReadPosRankSum=1.648;VQSLOD=4.4944;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:56.89:0,57,480	1/1:2,5:7:21.04:221,21,0	0/0:40,0:37:49.08:0,49,369	0/0:17,0:17:13.29:0,13,134	0/0:27,0:27:65.95:0,66,569	0/0:21,0:21:56.96:0,57,491	0/0:22,0:22:56.95:0,57,486	0/0:21,1:21:17.76:0,18,373	0/0:25,0:25:68.97:0,69,599	0/0:40,0:40:99:0,108,934	0/0:24,0:24:59.97:0,60,518	0/0:15,0:15:44.97:0,45,387	0/0:18,0:18:47.96:0,48,412	0/0:31,0:31:89.93:0,90,769	1/1:4,28:32:56.31:808,56,0	1/1:2,22:24:57.15:631,57,0	0/0:19,0:19:50.90:0,51,426	0/0:20,0:20:53.97:0,54,465	0/0:19,0:19:47.95:0,48,410	0/0:21,0:21:56.91:0,57,485	0/0:13,0:13:35.96:0,36,308	0/0:23,0:23:65.98:0,66,571	0/0:21,0:21:59.99:0,60,520	0/0:20,0:20:53.99:0,54,469	0/0:19,1:20:26.79:0,27,457	0/0:33,0:34:94.97:0,95,804	0/0:33,0:33:89.97:0,90,778	0/0:12,0:12:32.99:0,33,286
chr10	53981465	.	A	ATTGTTGTTG	17419.04	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=3.865;DP=711;FS=0.746;HRun=0;HaplotypeScore=199.3349;InbreedingCoeff=0.9873;MQ=61.04;MQ0=1;MQRankSum=-15.860;QD=38.97;ReadPosRankSum=-1.571;VQSLOD=4.4579;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:39.11:0,39,998	1/1:4,8:10:15.05:686,15,0	0/0:24,0:20:27.07:0,27,642	0/0:28,0:28:49.03:0,49,1045	1/1:15,0:32:43.44:837,43,0	1/1:7,0:27:49.58:976,50,0	1/1:6,0:12:21.07:407,21,0	0/0:31,0:31:48.15:0,48,1149	1/1:14,0:29:42.14:806,42,0	1/1:15,0:29:43.57:861,44,0	1/1:11,0:25:31.53:650,32,0	0/0:24,0:24:57.16:0,57,1436	0/0:24,0:24:57.11:0,57,1456	1/1:10,0:29:54.19:1065,54,0	1/1:20,23:45:81.28:3418,81,0	1/1:14,22:36:63.22:2776,63,0	0/0:2,0:14:36.12:0,36,754	0/0:3,0:19:33.11:0,33,691	1/1:11,0:15:18.03:327,18,0	1/1:26,0:38:53.39:1073,53,0	1/1:8,0:14:9.03:173,9,0	0/0:35,0:35:78.27:0,78,2118	0/0:24,0:24:63.18:0,63,1637	0/0:22,0:22:51.16:0,51,1362	1/1:8,0:24:36.12:709,36,0	1/1:15,0:28:54.19:1067,54,0	1/1:15,0:31:54.19:1028,54,0	1/1:10,0:16:27.09:560,27,0
chr10	53987301	.	CA	C	3641.85	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=6.821;DP=718;FS=6.517;HRun=2;HaplotypeScore=74.7331;InbreedingCoeff=0.9792;MQ=87.49;MQ0=0;MQRankSum=-0.136;QD=36.42;ReadPosRankSum=-1.859;VQSLOD=3.3782;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,120,1773	0/0:14,0:14:42.14:0,42,628	0/0:20,0:20:51.13:0,51,696	0/0:28,1:29:60.54:0,61,1021	0/0:33,0:33:99:0,99,1371	0/0:28,0:28:84.28:0,84,1258	0/0:25,0:25:72.20:0,72,1019	1/1:1,43:44:99:1578,126,0	0/0:21,0:21:63.11:0,63,861	0/0:31,0:31:90.19:0,90,1247	0/0:28,0:28:81.23:0,81,1122	0/0:30,0:30:87.28:0,87,1276	0/0:17,0:17:51.17:0,51,763	0/0:19,0:19:57.18:0,57,834	0/0:37,0:37:99:0,108,1588	0/0:23,0:23:66.14:0,66,941	1/1:0,32:32:87.28:1129,87,0	1/1:0,24:24:72.23:934,72,0	0/0:27,0:27:78.26:0,78,1150	0/0:28,0:28:78.22:0,78,1092	0/0:27,0:27:81.27:0,81,1213	0/0:23,0:23:69.22:0,69,991	0/0:10,0:10:27.09:0,27,405	0/0:27,0:27:78.25:0,78,1147	0/0:18,0:18:51.12:0,51,721	0/0:29,0:29:87.28:0,87,1268	0/0:31,0:31:90.30:0,90,1346	0/0:3,0:3:9.03:0,9,135
chr10	53987511	.	CACCCCACACCTTGT	C	17174.91	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=17.032;DP=730;FS=0.000;HRun=0;HaplotypeScore=301.1104;InbreedingCoeff=0.9833;MQ=82.01;MQ0=0;MQRankSum=-17.085;QD=75.33;ReadPosRankSum=3.046;VQSLOD=4.1051;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,102,6898	1/1:2,7:10:24.08:979,24,0	0/0:27,0:27:54.19:0,54,2160	0/0:25,0:25:51.16:0,51,2611	1/1:7,22:29:51.65:1991,52,0	0/0:23,0:23:57.20:0,57,3488	0/0:29,0:29:78.23:0,78,4350	1/1:15,11:26:33.09:1152,33,0	1/1:7,16:23:39.13:1591,39,0	0/0:30,0:30:81.28:0,81,5269	0/0:11,0:11:30.10:0,30,1791	0/0:43,0:43:99:0,108,7022	0/0:35,0:35:87.28:0,87,5540	1/1:2,19:21:48.16:1934,48,0	1/1:6,27:33:72.25:2938,72,0	1/1:4,16:20:45.15:1836,45,0	1/1:6,11:16:21.07:771,21,0	1/1:7,4:10:6.02:245,6,0	0/0:24,0:24:54.18:0,54,3561	0/0:28,0:28:75.26:0,75,5100	0/0:58,0:58:99:0,157,10180	0/0:15,0:15:42.14:0,42,2842	0/0:12,0:12:33.11:0,33,2049	0/0:29,0:29:81.28:0,81,5363	1/1:3,35:38:93.32:3738,93,0	0/0:30,0:30:78.26:0,78,5071	0/0:21,0:21:48.14:0,48,2745	0/0:18,0:18:48.16:0,48,3129
chr10	53989684	.	CAAAT	C	1956.64	PASS	AB=1.000;AC=25;AF=0.543;AN=46;BaseQRankSum=6.756;DP=272;FS=6.252;HRun=0;HaplotypeScore=52.5457;InbreedingCoeff=0.6813;MQ=67.79;MQ0=3;MQRankSum=-2.522;QD=12.87;ReadPosRankSum=0.520;VQSLOD=1.7375;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:21.07:0,21,486	0/0:6,0:6:3.01:0,3,71	0/1:12,0:5:0:0,0,0	./.	0/0:9,0:9:6.02:0,6,142	1/1:10,11:21:15.05:235,15,0	1/1:5,3:8:3.01:47,3,0	./.	0/0:5,0:5:3:0,3,27	1/1:5,0:5:3:27,3,0	1/1:2,3:5:9.03:141,9,0	./.	0/0:7,0:7:6.02:0,6,142	./.	0/0:10,0:10:9.03:0,9,213	0/0:5,0:5:9.02:0,9,167	1/1:12,0:27:17.98:159,18,0	1/1:4,0:14:21.02:196,21,0	1/1:9,6:15:17.93:282,18,0	1/1:7,1:8:3.01:47,3,0	1/1:3,2:5:5.80:94,6,0	./.	0/0:5,0:5:3.01:0,3,71	0/0:5,0:5:6.02:0,6,142	0/0:11,0:11:21.03:0,21,446	1/1:8,5:13:15.05:235,15,0	1/1:3,9:12:27.09:423,27,0	1/1:2,5:7:15.05:235,15,0
chr10	53991773	.	ACTCTCTCTCT	A	727.21	PASS	AC=6;AF=0.115;AN=52;BaseQRankSum=4.051;DP=565;FS=17.455;HRun=0;HaplotypeScore=142.8382;InbreedingCoeff=0.5486;MQ=65.75;MQ0=11;MQRankSum=-4.444;QD=14.84;ReadPosRankSum=0.336;VQSLOD=1.8632;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:9.49:0,9,112	1/1:7,5:11:3.01:89,3,0	./.	0/0:58,0:29:1.36:0,1,3	./.	0/0:18,0:18:12.04:0,12,306	0/0:13,0:13:6.02:0,6,201	0/0:40,0:40:5.51:0,6,118	0/0:11,0:11:15.52:0,16,272	0/0:10,0:10:3.01:0,3,44	0/0:13,0:13:3.01:0,3,70	0/0:14,0:18:18.05:0,18,465	0/0:18,0:21:29.27:0,29,613	0/0:14,0:16:26.68:0,27,569	1/1:15,2:18:9.50:247,10,0	1/1:9,9:19:17.53:511,18,0	0/0:12,0:14:12.04:0,12,452	0/0:12,0:13:9.03:0,9,331	0/0:29,0:26:20.69:0,21,331	0/0:19,0:18:3.01:0,3,90	0/0:20,0:20:18.06:0,18,511	0/0:10,0:10:9.03:0,9,258	0/0:10,0:10:3.01:0,3,60	0/0:17,0:21:27.09:0,27,732	0/0:20,0:20:6.49:0,6,114	0/0:24,0:24:33.11:0,33,907	0/0:32,0:32:45.15:0,45,1434	0/0:18,0:16:9.39:0,9,95
chr10	53991978	.	CT	C	5654.23	PASS	AB=0.538;AC=25;AF=0.446;AN=56;BaseQRankSum=10.489;DP=571;FS=1.565;HRun=9;HaplotypeScore=62.7787;InbreedingCoeff=0.8851;MQ=67.77;MQ0=2;MQRankSum=1.115;QD=21.50;ReadPosRankSum=0.748;VQSLOD=5.5207;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,99,1139	0/0:10,1:11:3.01:0,3,274	0/0:19,0:16:21.21:0,21,204	0/0:14,0:8:1.90:0,2,79	0/0:29,0:29:84.25:0,84,969	1/1:1,18:19:39.02:357,39,0	1/1:1,13:14:33.02:302,33,0	1/1:4,22:26:66.03:603,66,0	0/0:19,1:20:17.51:0,18,457	1/1:2,18:20:51:460,51,0	1/1:2,21:23:60.03:546,60,0	0/0:22,0:22:60.16:0,60,680	0/0:26,0:26:63.66:0,64,727	0/0:17,0:17:51.14:0,51,573	0/0:17,0:17:42.12:0,42,484	0/0:19,0:19:51.15:0,51,586	0/1:2,12:14:4.60:217,0,5	1/1:3,18:21:22.89:411,23,0	1/1:7,14:21:10.40:350,10,0	1/1:1,20:21:60.03:547,60,0	1/1:0,13:13:24.01:220,24,0	0/0:10,0:10:24.07:0,24,277	0/0:12,0:13:26.91:0,27,289	0/0:32,0:32:93.22:0,93,1048	0/0:19,0:19:45.13:0,45,519	1/1:3,26:29:78.02:708,78,0	1/1:2,30:32:81.04:741,81,0	1/1:2,8:10:21.01:192,21,0
chr10	53992760	.	TA	T	4510.26	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=12.529;DP=378;FS=0.000;HRun=6;HaplotypeScore=34.6926;InbreedingCoeff=0.9261;MQ=68.30;MQ0=0;MQRankSum=0.266;QD=27.50;ReadPosRankSum=1.732;VQSLOD=4.4929;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:39.11:0,39,497	0/0:10,0:10:27.09:0,27,353	0/0:3,0:3:6.02:0,6,73	0/0:5,0:4:5.87:0,6,40	0/0:29,0:29:78.25:0,78,1023	1/1:3,14:17:39.10:419,39,0	1/1:1,5:6:15.04:161,15,0	0/0:30,0:30:72.15:0,72,872	0/0:6,0:6:18.06:0,18,237	1/1:1,15:16:45.05:462,45,0	1/1:3,23:26:69.17:741,69,0	0/0:8,0:8:21.07:0,21,276	0/0:13,0:13:36.12:0,36,470	0/0:5,0:5:15.05:0,15,197	0/0:7,0:7:21.07:0,21,276	0/0:13,0:13:36.10:0,36,459	0/0:20,0:20:51.17:0,51,669	0/0:22,0:22:66.12:0,66,815	1/1:1,14:15:42.11:451,42,0	1/1:6,17:23:45.07:472,45,0	1/1:0,8:8:21.05:226,21,0	0/0:3,0:3:6:0,6,62	0/0:2,0:2:6.02:0,6,79	0/0:5,0:4:12.04:0,12,158	0/0:20,0:20:51.15:0,51,654	1/1:1,18:19:54.13:580,54,0	1/1:1,20:21:57.14:612,57,0	1/1:0,13:13:36.09:387,36,0
chr10	53994520	.	G	GGGA	3962.07	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=10.331;DP=697;FS=1.535;HRun=0;HaplotypeScore=99.9286;InbreedingCoeff=0.9999;MQ=80.19;MQ0=0;MQRankSum=-3.817;QD=50.80;ReadPosRankSum=-2.426;VQSLOD=4.8311;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:90.27:0,90,1401	0/0:14,0:14:42.12:0,42,614	0/0:26,0:25:67.75:0,68,1003	0/0:22,0:22:50.92:0,51,699	0/0:36,0:36:99:0,105,1638	0/0:20,0:20:51.16:0,51,787	0/0:23,0:23:66.18:0,66,982	1/1:5,29:36:99:1772,99,0	0/0:28,0:28:78.25:0,78,1246	0/0:28,0:28:84.26:0,84,1303	0/0:21,0:21:63.20:0,63,1004	0/0:24,0:24:69.18:0,69,1049	0/0:27,0:27:81.24:0,81,1268	0/0:16,0:16:48.14:0,48,734	0/0:28,0:28:78.25:0,78,1248	0/0:29,0:29:84.27:0,84,1315	1/1:4,22:27:72.09:1471,72,0	1/1:0,14:15:33.11:719,33,0	0/0:23,0:23:56.53:0,57,839	0/0:21,0:21:57.19:0,57,927	0/0:26,0:26:72.21:0,72,1103	0/0:22,0:22:63.19:0,63,976	0/0:28,0:28:84.26:0,84,1305	0/0:23,0:23:66.17:0,66,1022	0/0:30,0:30:90.29:0,90,1423	0/0:22,0:22:66.09:0,66,970	0/0:31,0:31:90.28:0,90,1419	0/0:21,0:21:63.22:0,63,1021
chr10	53995580	.	T	TGGG	3695.13	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-1.379;DP=777;FS=12.408;HRun=6;HaplotypeScore=108.6767;InbreedingCoeff=0.9998;MQ=82.06;MQ0=0;MQRankSum=-4.632;QD=45.62;ReadPosRankSum=-0.461;VQSLOD=2.1783;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:75.24:0,75,1053	0/0:14,0:14:42.14:0,42,595	0/0:25,0:25:53.74:0,54,710	0/0:26,0:26:57.14:0,57,777	0/0:35,0:35:90.26:0,90,1260	0/0:30,0:30:75.24:0,75,1064	0/0:17,0:17:45.09:0,45,584	1/1:7,23:28:68.24:1316,68,0	0/0:20,0:20:51.16:0,51,724	0/0:28,0:28:75.24:0,75,1049	0/0:23,0:23:63.20:0,63,891	0/0:36,0:36:93.30:0,93,1320	0/0:32,0:32:84.27:0,84,1191	0/0:26,0:26:69.22:0,69,979	0/0:37,0:37:81.24:0,81,1149	0/0:35,0:35:99:0,99,1369	1/1:3,20:23:51.18:1083,51,0	1/1:2,23:25:63.18:1295,63,0	0/0:18,0:18:48.15:0,48,664	0/0:35,0:35:99:0,102,1437	0/0:37,0:39:99:0,104,1487	0/0:30,0:30:74.24:0,74,986	0/0:25,0:25:72.22:0,72,999	0/0:34,0:34:87.23:0,87,1210	0/0:30,0:30:87.24:0,87,1179	0/0:25,0:25:69.19:0,69,943	0/0:35,0:34:72.11:0,72,1014	0/0:11,0:11:30.06:0,30,404
chr10	53999909	.	A	AC	1763.40	PASS	AB=0.721;AC=21;AF=0.375;AN=56;BaseQRankSum=-5.484;DP=509;FS=12.598;HRun=10;HaplotypeScore=66.8288;InbreedingCoeff=0.0046;MQ=80.95;MQ0=1;MQRankSum=-0.322;QD=6.83;ReadPosRankSum=-1.205;VQSLOD=0.3109;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:38:75.74:0,76,577	0/1:2,2:4:15.62:55,0,16	0/0:24,0:24:33.72:0,34,261	0/0:16,0:16:3.76:0,4,202	1/1:6,3:9:3.01:32,3,0	1/1:6,12:18:14.22:138,14,0	0/1:9,19:28:19.79:425,0,20	0/0:24,0:27:48.02:0,48,362	0/1:4,6:10:18.63:26,0,19	0/1:9,1:10:15.69:41,0,16	0/1:5,0:5:2.04:2,0,16	0/0:22,0:22:53.85:0,54,431	0/0:19,0:19:26.91:0,27,218	0/1:9,11:20:74.26:75,0,74	0/1:16,11:27:19.47:148,0,19	0/1:10,9:20:20.89:152,0,21	0/0:17,0:18:28.94:0,29,220	0/0:17,0:17:38.89:0,39,313	0/1:7,2:9:15.66:43,0,16	0/1:4,4:8:9.67:99,0,10	1/1:20,13:32:18.03:184,18,0	0/0:22,0:23:45.76:0,46,352	0/0:9,0:12:12.94:0,13,83	0/0:30,0:33:60.87:0,61,466	0/1:9,2:11:37.25:51,0,37	0/1:5,7:12:10.21:66,0,10	0/1:6,18:24:16.24:241,0,16	1/1:3,7:10:15.04:160,15,0
chr10	54000584	.	CT	C	1336.16	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=6.945;DP=660;FS=4.700;HRun=10;HaplotypeScore=67.5256;InbreedingCoeff=0.9885;MQ=73.86;MQ0=1;MQRankSum=0.067;QD=20.88;ReadPosRankSum=-0.888;VQSLOD=4.3870;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,102,1110	0/0:4,0:4:12.03:0,12,133	0/0:22,0:19:30.69:0,31,294	0/0:14,0:12:29.25:0,29,280	0/0:28,1:30:60.99:0,61,867	0/0:26,1:27:43.13:0,43,697	0/0:30,0:30:84.06:0,84,886	1/1:4,23:27:68.94:593,69,0	0/0:23,0:23:63.17:0,63,697	0/0:22,0:22:54.13:0,54,584	0/0:25,0:25:69.16:0,69,747	0/0:20,0:20:49.01:0,49,526	0/0:23,0:23:51.13:0,51,557	0/0:27,0:27:72.19:0,72,789	0/0:22,0:22:57.15:0,57,623	0/0:19,0:20:47.93:0,48,494	1/1:1,22:23:65.98:573,66,0	1/1:1,13:14:35.99:313,36,0	0/0:32,0:32:84.19:0,84,900	0/0:29,0:29:75.20:0,75,830	0/0:15,0:15:39.09:0,39,423	0/0:17,0:17:39.10:0,39,424	0/0:32,0:32:81.21:0,81,888	0/0:28,0:28:69.13:0,69,748	0/0:20,0:20:47.13:0,47,481	0/0:34,2:36:61.17:0,61,896	0/0:32,0:32:84.18:0,84,908	0/0:11,0:11:30.92:0,31,312
chr10	54000790	.	G	GT	7710.56	PASS	AB=1.000;AC=27;AF=0.482;AN=56;BaseQRankSum=-14.316;DP=708;FS=5.925;HRun=10;HaplotypeScore=66.7180;InbreedingCoeff=0.9162;MQ=67.43;MQ0=17;MQRankSum=2.195;QD=20.67;ReadPosRankSum=0.755;VQSLOD=5.8865;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:50.93:0,51,419	0/0:9,0:11:22.99:0,23,178	0/0:44,0:18:14.67:0,15,155	0/1:46,0:17:2.82:3,0,39	0/0:31,0:32:82.27:0,82,646	1/1:3,29:32:59.57:838,60,0	1/1:2,17:19:45.11:480,45,0	1/1:9,22:30:63.12:653,63,0	0/0:23,0:23:61.71:0,62,486	1/1:5,23:30:77.51:719,78,0	1/1:2,16:19:44.95:462,45,0	0/0:20,0:20:50.91:0,51,416	0/0:18,0:18:50.91:0,51,415	0/0:24,0:24:65.88:0,66,535	0/0:29,0:29:71.88:0,72,588	0/0:27,0:27:74.87:0,75,609	1/1:4,28:32:75.19:800,75,0	1/1:1,25:26:54.14:575,54,0	1/1:5,13:18:17.24:346,17,0	1/1:1,29:31:81.04:813,81,0	1/1:1,16:17:39.10:416,39,0	0/0:18,0:18:50.93:0,51,417	0/0:21,0:21:56.83:0,57,460	0/0:29,0:29:68.91:0,69,566	0/0:18,0:18:38.78:0,39,310	1/1:4,22:26:44.35:653,44,0	1/1:5,19:24:32.64:551,33,0	1/1:2,17:19:0.79:401,1,0
chr10	54001765	.	TACACACACACACAC	T	347.70	PASS	AB=0.792;AC=4;AF=0.095;AN=42;BaseQRankSum=2.091;DP=119;FS=8.728;HRun=0;HaplotypeScore=45.9444;InbreedingCoeff=0.0804;MQ=37.61;MQ0=8;MQRankSum=-1.974;QD=21.73;ReadPosRankSum=1.574;VQSLOD=0.0625;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:3,0:3:6.02:0,6,329	0/0:1,0:1:3.01:0,3,167	./.	./.	0/0:2,0:2:6.02:0,6,335	0/0:5,0:5:0:0,0,0	0/0:1,0:1:3.01:0,3,136	0/0:26,0:21:60.21:0,60,2523	0/0:4,0:4:12.04:0,12,562	0/1:4,1:5:99:111,0,332	./.	0/0:2,0:2:3.01:0,3,156	0/0:1,0:1:3.01:0,3,166	0/0:1,0:1:3.01:0,3,122	0/0:2,0:2:6.02:0,6,336	0/0:5,0:5:15.05:0,15,858	0/0:10,0:7:2.03:0,2,22	0/0:14,0:12:21.07:0,21,780	1/1:0,2:2:6.02:222,6,0	./.	./.	0/0:1,0:1:3.01:0,3,168	./.	./.	0/0:2,0:2:6.02:0,6,294	0/0:1,0:1:3.01:0,3,97	0/1:6,3:9:99:111,0,252	0/0:6,0:6:12.04:0,12,549
chr10	54001779	.	CAT	C	450.40	PASS	AB=0.880;AC=12;AF=0.240;AN=50;BaseQRankSum=3.965;DP=198;FS=9.283;HRun=0;HaplotypeScore=41.0619;InbreedingCoeff=-0.0357;MQ=38.47;MQ0=8;MQRankSum=-3.036;QD=3.69;ReadPosRankSum=1.170;VQSLOD=0.2249;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:3,0:3:6.02:0,6,92	0/0:1,0:1:3.01:0,3,47	./.	0/0:7,0:1:0.89:0,1,2	0/0:5,0:5:15:0,15,163	0/1:3,6:9:0:0,0,0	0/1:3,0:3:17.42:33,0,17	0/1:33,0:28:73.07:84,0,73	0/1:4,1:5:1.49:1,0,148	0/1:5,3:8:23.29:78,0,23	./.	0/0:5,0:5:12.01:0,12,143	0/0:2,0:2:6:0,6,71	0/0:4,0:4:5.99:0,6,49	0/0:6,0:6:18:0,18,193	0/0:5,0:5:15.05:0,15,236	0/1:9,0:8:0:0,0,0	0/1:13,0:11:3.49:13,0,3	0/1:8,0:8:19.45:75,0,19	0/0:8,1:6:2.99:0,3,24	./.	0/0:1,0:1:3.01:0,3,47	0/0:2,0:2:5.99:0,6,50	0/0:1,0:1:2.99:0,3,24	0/0:7,0:7:14.53:0,15,123	0/1:9,1:10:15.90:125,0,16	0/1:10,6:16:23.98:90,0,24	1/1:7,1:8:3.90:74,4,0
chr10	54001820	.	G	GTA	244.36	PASS	AB=0.884;AC=6;AF=0.111;AN=54;BaseQRankSum=6.736;DP=397;FS=6.244;HRun=0;HaplotypeScore=63.0567;InbreedingCoeff=-0.0786;MQ=51.75;MQ0=11;MQRankSum=-4.934;QD=1.88;ReadPosRankSum=0.836;VQSLOD=0.8586;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:24.08:0,24,344	0/0:7,0:7:21.07:0,21,301	0/0:11,0:3:0.98:0,1,2	0/1:32,0:6:13.55:14,0,137	0/0:8,0:8:18.06:0,18,258	0/0:19,0:19:27.09:0,27,386	0/0:10,0:8:12.04:0,12,172	0/1:38,0:38:47:47,0,454	0/0:11,0:11:30.10:0,30,423	0/1:19,1:20:67.86:68,0,597	0/0:12,1:12:12.04:0,12,172	0/0:9,0:9:27.09:0,27,387	0/0:11,0:11:30.10:0,30,427	0/0:11,0:11:30.10:0,30,430	0/0:16,0:16:48.13:0,48,651	0/0:17,0:17:48.16:0,48,685	./.	0/0:10,0:9:2.90:0,3,16	0/1:14,1:11:26.54:27,0,252	0/0:12,2:11:21.07:0,21,299	0/0:13,0:13:24.07:0,24,325	0/0:3,0:3:9.03:0,9,129	0/0:10,0:10:30.10:0,30,430	0/0:9,0:9:24.08:0,24,344	0/0:11,0:11:27.09:0,27,386	0/1:14,4:18:99:162,0,464	0/0:28,0:28:15.75:0,16,543	0/1:2,3:5:31.50:49,0,32
chr10	54001822	.	A	ATATATATGTGTG	1733.18	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=4.408;DP=413;FS=26.255;HRun=0;HaplotypeScore=120.4581;InbreedingCoeff=0.5127;MQ=51.86;MQ0=11;MQRankSum=-7.475;QD=20.39;ReadPosRankSum=-3.070;VQSLOD=0.3568;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:22.50:0,23,899	0/0:7,0:7:21.07:0,21,723	0/1:13,0:4:0.04:0,0,1	0/0:35,0:6:11.70:0,12,131	0/0:7,0:8:21.06:0,21,665	0/0:19,0:19:30.10:0,30,960	0/0:11,0:9:15.03:0,15,404	1/1:36,0:36:27.31:1668,27,0	0/0:12,0:12:36.10:0,36,1047	0/0:22,0:22:51.51:0,52,1586	0/0:13,0:12:12.04:0,12,421	0/0:9,0:9:27.09:0,27,1035	0/0:11,0:11:33.10:0,33,822	0/0:11,0:11:33.10:0,33,1099	0/0:16,0:16:48.14:0,48,1514	0/0:17,0:17:51.16:0,51,1595	0/0:0,12:19:0:0,0,0	1/1:1,9:12:3.01:128,3,0	0/0:15,0:11:29.14:0,29,644	0/0:15,0:12:24.07:0,24,748	0/0:13,0:13:27.06:0,27,689	0/0:3,0:3:9.03:0,9,306	0/0:11,0:11:30.10:0,30,1057	0/0:10,0:10:27.07:0,27,901	0/0:10,0:10:30.09:0,30,937	0/1:18,0:18:41.45:41,0,1162	0/0:28,0:28:53.79:0,54,1177	0/1:5,0:5:19.73:20,0,132
chr10	54001832	.	A	ATG	122.93	PASS	AB=0.842;AC=4;AF=0.071;AN=56;BaseQRankSum=6.722;DP=454;FS=3.117;HRun=0;HaplotypeScore=69.0233;InbreedingCoeff=-0.0220;MQ=59.41;MQ0=10;MQRankSum=-6.039;QD=2.20;ReadPosRankSum=0.497;VQSLOD=1.5129;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:36.12:0,36,550	0/0:7,0:7:21.07:0,21,321	0/0:18,0:8:0.86:0,1,2	0/0:31,0:5:8.79:0,9,76	0/0:10,0:10:27.09:0,27,413	0/0:21,0:21:33.08:0,33,462	0/0:13,0:11:21.07:0,21,320	0/0:42,0:42:4.63:0,5,898	0/0:13,0:13:39.12:0,39,573	0/1:21,0:21:15.78:16,0,729	0/0:14,1:14:15.04:0,15,209	0/0:12,0:12:33.10:0,33,484	0/0:12,0:12:36.12:0,36,551	0/0:12,0:12:36.12:0,36,551	0/0:19,0:19:57.19:0,57,870	0/0:17,0:17:51.17:0,51,781	0/0:21,0:21:3.01:0,3,46	0/0:14,0:13:5.32:0,5,83	0/1:11,1:10:15.42:15,0,299	0/0:15,2:14:30.07:0,30,417	0/0:17,0:17:36.12:0,36,547	0/0:3,0:3:9.03:0,9,138	0/0:12,0:12:33.11:0,33,505	0/0:11,0:11:33.11:0,33,503	0/0:14,0:14:42.13:0,42,620	0/1:14,4:18:99:172,0,524	0/0:32,0:32:65.89:0,66,908	0/1:2,3:5:25.90:26,0,54
chr10	54002932	.	TCTC	T	7592.09	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=10.664;DP=755;FS=1.467;HRun=0;HaplotypeScore=113.7713;InbreedingCoeff=0.9999;MQ=92.64;MQ0=0;MQRankSum=-3.390;QD=42.65;ReadPosRankSum=4.440;VQSLOD=6.4681;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,123,2732	1/1:0,20:20:44.99:766,45,0	0/0:34,0:33:93.12:0,93,1907	0/0:36,0:36:98.87:0,99,2071	1/1:1,28:29:69.20:1144,69,0	0/0:26,0:26:75.26:0,75,1727	0/0:25,0:25:75.22:0,75,1597	0/0:24,0:24:63.22:0,63,1424	1/1:0,17:17:48.16:818,48,0	0/0:29,0:29:87.27:0,87,1880	0/0:26,0:26:78.27:0,78,1775	0/0:19,0:19:54.19:0,54,1214	0/0:27,0:27:81.26:0,81,1798	1/1:0,32:32:90.31:1533,90,0	1/1:1,24:25:57.20:969,57,0	1/1:1,30:31:87.23:1443,87,0	0/0:38,0:38:99:0,111,2403	0/0:10,0:10:30.09:0,30,648	0/0:21,0:21:48.16:0,48,1101	0/0:38,0:38:99:0,114,2574	0/0:43,0:43:99:0,126,2742	0/0:25,0:25:75.26:0,75,1714	0/0:20,0:20:60.19:0,60,1318	0/0:21,0:21:63.20:0,63,1335	1/1:0,24:24:54.18:920,54,0	0/0:29,0:29:84.29:0,84,1874	0/0:30,0:30:84.28:0,84,1852	0/0:13,0:13:39.11:0,39,851
chr10	54004419	.	T	TA	2062.02	PASS	AB=0.983;AC=8;AF=0.143;AN=56;BaseQRankSum=-6.491;DP=438;FS=2.246;HRun=7;HaplotypeScore=49.9908;InbreedingCoeff=0.6668;MQ=79.26;MQ0=6;MQRankSum=0.059;QD=13.75;ReadPosRankSum=-1.893;VQSLOD=2.5608;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:50.90:0,51,461	0/0:9,0:9:27.04:0,27,260	0/1:27,0:14:5:5,0,77	0/1:35,0:22:7.15:7,0,110	0/0:18,0:18:51.03:0,51,479	0/0:12,0:12:30.03:0,30,283	0/0:7,0:7:21.02:0,21,197	1/1:13,28:41:87.16:982,87,0	0/0:7,0:7:21:0,21,194	0/0:20,0:20:48.01:0,48,450	0/0:20,0:20:48.02:0,48,444	0/0:10,0:10:27.01:0,27,249	0/0:7,0:7:21.03:0,21,202	0/0:8,0:9:0.67:0,1,169	0/0:7,0:7:21.03:0,21,202	0/0:9,0:9:20.96:0,21,186	1/1:2,20:22:54.17:644,54,0	1/1:3,20:23:48.15:571,48,0	0/0:24,0:24:60.07:0,60,571	0/0:10,0:10:27.03:0,27,256	0/0:5,0:5:14.97:0,15,131	0/0:3,0:3:6:0,6,58	0/0:11,0:11:24.02:0,24,227	0/0:5,0:5:15.01:0,15,140	0/0:22,0:22:66.07:0,66,624	0/0:21,0:21:57.06:0,57,538	0/0:21,0:21:54.07:0,54,514	0/0:11,0:11:30.05:0,30,289
chr10	54004562	.	T	TAGCTATAACAGC	38254.05	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-4.375;DP=514;FS=2.158;HRun=0;HaplotypeScore=160.8219;InbreedingCoeff=0.9852;MQ=71.64;MQ0=0;MQRankSum=-12.674;QD=93.30;ReadPosRankSum=-1.960;VQSLOD=4.7117;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:66.21:0,66,2108	1/1:5,6:11:24.08:1334,24,0	0/0:13,0:13:27.07:0,27,696	0/0:17,0:17:39.10:0,39,1269	1/1:16,12:28:48.16:2622,48,0	1/1:14,12:27:48.16:2729,48,0	1/1:14,7:21:24.08:1330,24,0	1/1:45,0:45:66.21:2807,66,0	1/1:5,10:15:36.12:2143,36,0	1/1:9,11:23:57.17:2553,57,0	1/1:9,3:13:18.06:887,18,0	0/0:11,0:11:27.09:0,27,930	0/0:13,0:13:33.11:0,33,1080	1/1:7,6:13:33.11:1733,33,0	1/1:17,13:30:51.17:2937,51,0	1/1:9,9:19:36.12:1985,36,0	1/1:9,10:19:45.15:2671,45,0	1/1:12,5:17:30.10:1694,30,0	1/1:15,3:19:24.08:1171,24,0	1/1:6,7:14:27.09:1513,27,0	1/1:12,1:13:9.03:376,9,0	0/0:8,0:8:24.08:0,24,859	0/0:8,0:8:21.07:0,21,752	0/0:11,0:11:24.08:0,24,823	1/1:12,8:22:36.12:2050,36,0	1/1:15,6:25:45.14:1820,45,0	1/1:14,8:26:51.17:2743,51,0	1/1:3,7:10:21.07:1155,21,0
chr10	54005756	.	TACACACACACACACAC	T	4532.66	PASS	AB=0.772;AC=16;AF=0.286;AN=56;BaseQRankSum=9.471;DP=576;FS=18.279;HRun=0;HaplotypeScore=216.0611;InbreedingCoeff=0.5943;MQ=62.68;MQ0=15;MQRankSum=-8.682;QD=23.61;ReadPosRankSum=1.623;VQSLOD=2.5263;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:42.14:0,42,2300	1/1:3,3:6:6.02:260,6,0	0/0:28,0:20:12.04:0,12,296	0/0:25,0:17:12.04:0,12,304	0/1:9,0:16:30.27:60,0,30	0/0:20,0:19:30.10:0,30,2074	0/0:21,0:27:31.05:0,31,1500	0/1:19,0:18:54.89:72,0,55	1/1:9,0:24:15.15:740,15,0	0/0:17,0:17:42.14:0,42,2411	0/0:9,0:9:12.04:0,12,700	0/0:13,0:19:27.09:0,27,1572	0/0:14,0:15:18.06:0,18,1089	1/1:9,0:14:12.04:258,12,0	1/1:5,11:15:21.07:888,21,0	1/1:8,15:23:18.06:790,18,0	1/1:15,9:24:4.78:166,5,0	0/1:21,9:29:1:761,0,1	0/0:16,0:20:34.14:0,34,1739	0/0:18,0:22:12.04:0,12,751	0/0:33,0:30:33.11:0,33,1888	0/0:20,0:21:45.07:0,45,2968	0/0:13,0:12:21.07:0,21,1155	0/0:19,0:36:30.08:0,30,2033	0/1:8,2:20:19.29:535,0,19	0/0:27,0:26:60.21:0,60,3482	0/0:9,0:10:16.90:0,17,1015	0/0:10,0:8:3.01:0,3,36
chr10	54006291	.	CT	C	11732.94	PASS	AB=0.857;AC=41;AF=0.732;AN=56;BaseQRankSum=11.683;DP=696;FS=7.301;HRun=8;HaplotypeScore=67.6057;InbreedingCoeff=0.9069;MQ=71.62;MQ0=1;MQRankSum=-0.290;QD=22.56;ReadPosRankSum=0.712;VQSLOD=5.2465;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:81.23:0,81,965	1/1:0,14:14:36.06:347,36,0	0/0:15,0:13:16.94:0,17,145	0/1:10,1:11:18.49:18,0,32	1/1:4,33:37:93.13:897,93,0	1/1:1,25:26:57.09:550,57,0	1/1:0,18:18:45.07:434,45,0	1/1:8,30:38:90.07:843,90,0	1/1:2,17:19:45.07:434,45,0	1/1:2,26:28:78.09:738,78,0	1/1:0,24:24:72.12:695,72,0	0/0:34,0:34:96.25:0,96,1116	0/0:31,1:32:61.27:0,61,977	1/1:4,20:24:54.08:521,54,0	1/1:1,33:34:87.14:840,87,0	1/1:6,21:27:60.09:579,60,0	1/1:3,35:38:84.13:811,84,0	1/1:1,18:19:30.05:289,30,0	1/1:3,16:19:47.28:437,47,0	1/1:6,29:35:78.11:751,78,0	1/1:1,12:13:33.05:318,33,0	0/0:22,0:22:57.15:0,57,665	0/0:21,0:22:66.03:0,66,743	0/0:18,0:18:54.15:0,54,640	1/1:7,31:38:84.13:811,84,0	1/1:4,22:26:66.10:637,66,0	1/1:2,23:25:63.10:608,63,0	1/1:0,6:6:18.03:174,18,0
chr10	54006615	.	G	GAT	2790.72	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-12.459;DP=644;FS=7.872;HRun=0;HaplotypeScore=74.5653;InbreedingCoeff=0.9746;MQ=70.68;MQ0=0;MQRankSum=0.075;QD=37.71;ReadPosRankSum=-1.233;VQSLOD=4.8372;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:51.17:0,51,656	0/0:10,0:10:27.07:0,27,332	0/0:11,0:11:9.03:0,9,115	0/0:10,0:10:17.48:0,17,166	0/0:39,0:39:70.82:0,71,1263	0/0:22,0:22:57.18:0,57,733	0/0:19,0:19:48.10:0,48,598	1/1:8,30:39:90.31:1517,90,0	0/0:21,0:21:57.17:0,57,716	0/0:32,0:32:75.24:0,75,960	0/0:37,0:37:96.29:0,96,1207	0/0:16,0:16:39.11:0,39,488	0/0:25,0:25:54.16:0,54,680	0/0:22,0:22:63.06:0,63,754	0/0:25,0:25:69.19:0,69,870	0/0:24,0:24:54.18:0,54,693	1/1:4,22:26:60.21:1011,60,0	1/1:0,9:9:24.08:405,24,0	0/0:21,0:21:60.19:0,60,771	0/0:38,0:38:81.26:0,81,1040	0/0:17,0:17:42.08:0,42,505	0/0:19,0:19:54.15:0,54,667	0/0:27,0:27:69.21:0,69,874	0/0:10,0:10:24.08:0,24,307	0/0:36,0:36:87.28:0,87,1119	0/0:24,0:24:66.21:0,66,846	0/0:31,0:30:78.25:0,78,1003	0/0:13,0:13:39.13:0,39,500
chr10	54006745	.	A	ACACACATCTCCTTCATG	91587.83	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-1.752;DP=782;FS=0.690;HRun=0;HaplotypeScore=310.0050;InbreedingCoeff=0.9956;MQ=69.90;MQ0=0;MQRankSum=-17.198;QD=151.64;ReadPosRankSum=0.569;VQSLOD=4.3259;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:72.25:0,72,2965	1/1:14,12:27:66.23:4503,66,0	0/0:23,0:24:55.39:0,55,1601	0/0:16,0:16:30.09:0,30,889	1/1:20,13:37:72.25:4214,72,0	1/1:28,9:37:90.31:5190,90,0	1/1:18,5:25:66.23:4027,66,0	1/1:57,0:57:99:8643,160,0	1/1:17,16:35:99:6650,99,0	1/1:17,6:29:81.26:4933,81,0	1/1:12,10:23:51.17:3096,51,0	0/0:26,0:26:66.21:0,66,2697	0/0:25,0:25:66.21:0,66,2781	1/1:15,13:37:78.27:4603,78,0	1/1:16,14:33:87.30:5567,87,0	1/1:18,13:37:90.16:5475,90,0	1/1:12,5:20:42.14:2455,42,0	1/1:8,1:13:24.08:1296,24,0	1/1:15,2:20:57.20:3122,57,0	1/1:26,12:41:99:6520,114,0	1/1:8,4:14:15.05:1066,15,0	0/0:20,0:20:51.13:0,51,2248	0/0:24,0:24:66.19:0,66,2963	0/0:19,0:19:54.19:0,54,2353	1/1:21,10:35:87.30:4868,87,0	1/1:16,16:35:99:7618,99,0	1/1:23,16:40:99:7039,102,0	1/1:9,0:9:18.06:703,18,0
chr10	54007882	.	CTGTGTGTGTGTGTGTG	C	5071.84	PASS	AB=0.761;AC=16;AF=0.296;AN=54;BaseQRankSum=8.663;DP=664;FS=11.146;HRun=0;HaplotypeScore=261.2909;InbreedingCoeff=0.7443;MQ=55.15;MQ0=26;MQRankSum=-7.432;QD=31.31;ReadPosRankSum=3.438;VQSLOD=1.9545;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:54.95:0,55,3580	1/1:2,4:6:5.81:265,6,0	./.	0/0:22,0:8:2.90:0,3,16	1/1:12,13:25:14.83:588,15,0	0/0:23,0:21:22.36:0,22,1008	0/0:16,0:20:26.90:0,27,1032	0/0:35,0:44:63.61:0,64,1024	1/1:5,11:16:15.05:663,15,0	0/0:27,0:31:57.19:0,57,3454	0/0:6,0:10:9.03:0,9,434	0/0:27,0:31:30.57:0,31,1925	0/0:30,0:31:53.21:0,53,3064	1/1:9,9:21:21.07:820,21,0	1/1:9,15:24:15.05:586,15,0	1/1:10,9:20:20.95:794,21,0	0/1:8,0:12:12.07:109,0,12	0/1:12,0:16:13.29:13,0,208	0/0:12,0:10:18.06:0,18,1089	0/0:18,0:22:5.91:0,6,65	0/0:30,0:28:21.54:0,22,900	0/0:25,0:25:57.18:0,57,3525	0/0:29,0:33:51.18:0,51,2936	0/0:19,0:21:42.14:0,42,2769	1/1:7,13:21:32.94:1233,33,0	0/0:29,0:27:51.16:0,51,2965	0/0:30,0:30:50.24:0,50,2122	0/0:6,0:12:15.05:0,15,721
chr10	54008968	.	AG	A	1670.20	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=2.707;DP=590;FS=10.237;HRun=2;HaplotypeScore=70.1705;InbreedingCoeff=0.9628;MQ=83.36;MQ0=0;MQRankSum=-0.066;QD=33.40;ReadPosRankSum=0.948;VQSLOD=3.1458;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,108,1618	0/0:3,0:3:9.03:0,9,135	0/0:19,0:19:44.91:0,45,749	0/0:18,0:19:35.33:0,35,391	0/0:12,0:12:33.10:0,33,474	0/0:22,0:22:66.22:0,66,987	0/0:18,0:18:51.17:0,51,764	0/0:29,0:29:81.24:0,81,1157	0/0:20,0:20:60.20:0,60,898	0/0:23,0:23:69.23:0,69,1017	0/0:16,0:16:45.15:0,45,671	0/0:25,0:25:75.25:0,75,1104	0/0:18,0:18:54.13:0,54,763	0/0:34,0:34:99:0,102,1525	0/0:32,0:32:96.28:0,96,1413	0/0:22,0:22:63.19:0,63,920	1/1:0,30:30:84.27:1091,84,0	1/1:0,20:20:54.18:701,54,0	0/0:18,0:18:51.17:0,51,757	0/0:19,0:19:57.18:0,57,834	0/0:33,0:33:99:0,99,1456	0/0:13,0:13:36.12:0,36,539	0/0:5,0:5:15.05:0,15,224	0/0:26,0:26:75.22:0,75,1079	0/0:16,0:16:48.12:0,48,660	0/0:32,0:32:93.29:0,93,1343	0/0:16,0:16:45.15:0,45,674	0/0:14,0:14:42.14:0,42,629
chr10	54009174	.	TGCCGCCGCCGCCGCCGCCGCCGCCGCC	T	4595.41	PASS	AC=24;AF=0.500;AN=48;BaseQRankSum=4.465;DP=258;FS=7.819;HRun=0;HaplotypeScore=126.7223;InbreedingCoeff=0.6142;MQ=68.74;MQ0=4;MQRankSum=-4.465;QD=29.65;ReadPosRankSum=0.778;VQSLOD=2.6505;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:4:6:0,6,96	0/0:2,0:2:3.01:0,3,68	./.	0/0:9,0:8:5.98:0,6,134	1/1:3,3:6:5.95:110,6,0	1/1:11,7:17:6.02:425,6,0	1/1:5,14:19:3.01:203,3,0	./.	1/1:3,14:17:15.52:1063,16,0	1/1:8,0:8:6.02:171,6,0	./.	0/0:2,0:2:3.01:0,3,319	0/0:3,0:3:6.02:0,6,638	1/1:4,15:19:6.02:424,6,0	0/0:5,0:7:12.04:0,12,745	0/0:4,0:4:6.02:0,6,224	0/0:7,0:18:12.03:0,12,261	0/0:3,0:11:14.88:0,15,166	1/1:7,0:7:3:27,3,0	./.	1/1:22,0:20:12.03:358,12,0	0/0:1,0:1:2.04:0,2,6	0/0:2,0:2:3.01:0,3,48	0/0:32,0:32:75.26:0,75,7005	1/1:0,8:8:3.01:212,3,0	1/1:2,10:12:5.08:343,5,0	1/1:6,9:15:9.03:622,9,0	1/1:0,4:4:9.03:637,9,0
chr10	54009526	.	TCACACACACACA	T	1748.45	PASS	AB=0.667;AC=7;AF=0.130;AN=54;BaseQRankSum=5.154;DP=539;FS=2.305;HRun=0;HaplotypeScore=165.0736;InbreedingCoeff=0.6008;MQ=71.05;MQ0=8;MQRankSum=-5.668;QD=24.63;ReadPosRankSum=-0.922;VQSLOD=3.0119;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:27:39.13:0,39,1762	0/0:6,0:6:8.60:0,9,341	0/0:30,0:27:2.99:0,3,23	./.	0/1:9,9:18:3.54:268,0,4	0/0:17,0:15:21.05:0,21,924	0/0:27,0:27:15.05:0,15,736	0/0:21,0:20:9.02:0,9,177	1/1:6,9:15:2.56:569,3,0	0/0:20,0:20:33.08:0,33,1358	0/0:13,0:11:3.01:0,3,87	0/0:16,0:17:30.10:0,30,1364	0/0:18,0:18:18.06:0,18,910	1/1:3,12:16:15.05:481,15,0	0/0:6,0:12:12.02:0,12,388	0/0:11,0:20:15.05:0,15,682	0/0:22,0:37:48.14:0,48,1368	0/0:10,0:16:24.06:0,24,583	0/0:9,0:9:11.47:0,11,442	0/0:6,0:13:3.48:0,3,75	0/0:29,0:29:36.09:0,36,1363	0/0:14,0:14:18.05:0,18,751	0/0:10,0:10:18.06:0,18,725	0/0:31,0:32:54.15:0,54,2261	1/1:9,12:21:12.97:560,13,0	0/0:23,0:23:35.47:0,35,1136	0/0:16,0:16:23.43:0,23,810	0/0:7,0:7:2.80:0,3,13
chr10	54010112	.	TAC	T	3077.97	PASS	AB=0.958;AC=16;AF=0.286;AN=56;BaseQRankSum=3.279;DP=958;FS=9.923;HRun=0;HaplotypeScore=206.5827;InbreedingCoeff=0.3682;MQ=52.51;MQ0=12;MQRankSum=3.982;QD=9.13;ReadPosRankSum=2.975;VQSLOD=2.4133;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:62,4:66:26.87:0,27,1667	1/1:4,8:11:21.06:240,21,0	0/0:28,0:8:3.01:0,3,43	0/0:36,0:6:9.03:0,9,130	0/1:17,0:25:0.29:0,0,249	0/0:21,0:18:6.01:0,6,69	0/0:18,0:24:5.03:0,5,33	0/0:48,1:49:38.49:0,38,1144	0/0:52,1:52:12.96:0,13,618	0/0:37,0:41:6.72:0,7,468	0/0:12,0:12:2.99:0,3,24	0/0:48,0:49:61.31:0,61,1425	0/1:43,3:48:52.26:52,0,1218	0/0:27,0:43:44.45:0,44,407	1/1:8,49:58:99:1222,108,0	1/1:9,51:60:76.32:1358,76,0	1/1:12,0:25:47.52:225,48,0	1/1:14,0:21:2.52:96,3,0	0/0:14,0:12:0.46:0,0,57	0/1:17,0:18:11.66:12,0,53	0/0:56,0:50:35.90:0,36,295	0/1:33,4:37:21.23:21,0,1019	0/1:21,2:23:19.15:19,0,633	0/0:32,1:33:32.42:0,32,946	0/0:20,0:35:47.54:0,48,419	0/0:28,0:30:26.36:0,26,286	0/0:16,0:13:8.30:0,8,57	0/1:6,0:6:0.85:1,0,59
chr10	54010136	.	CAT	C	1123.80	PASS	AB=0.969;AC=16;AF=0.286;AN=56;BaseQRankSum=10.119;DP=1059;FS=2.438;HRun=0;HaplotypeScore=244.6096;InbreedingCoeff=0.2473;MQ=48.07;MQ0=24;MQRankSum=-2.144;QD=3.01;ReadPosRankSum=4.655;VQSLOD=2.4614;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:64,0:64:99:0,119,2321	0/1:10,2:11:21.74:105,0,22	0/0:54,0:12:19.91:0,20,278	0/0:60,0:16:7.61:0,8,314	0/0:32,0:32:21.65:0,22,581	0/0:18,0:13:3.92:0,4,23	1/1:24,0:21:2.10:12,2,0	0/0:58,0:59:99:0,113,1939	0/0:59,0:58:72.76:0,73,1072	0/1:43,0:40:18.39:272,0,18	0/1:13,0:13:0.15:0,0,0	0/0:47,0:47:99:0,124,2029	0/0:45,0:45:76.52:0,77,1762	0/0:48,0:46:65.77:0,66,686	0/1:68,0:67:99:234,0,266	0/1:62,1:63:99:326,0,140	0/0:27,0:26:39.64:0,40,186	0/0:22,0:20:40.25:0,40,301	1/1:18,0:15:7.39:51,7,0	0/1:16,1:17:15.48:39,0,15	0/1:53,2:43:7.84:10,0,8	0/0:44,1:44:75.81:0,76,1542	0/0:28,0:28:53.96:0,54,1027	0/0:42,0:41:80.53:0,81,1471	0/0:35,0:35:52.55:0,53,545	0/1:34,0:32:30.47:77,0,30	1/1:17,0:14:14.59:89,15,0	1/1:9,0:9:2.40:68,2,0
chr10	54010137	.	ATACTCG	A	2486.18	PASS	AB=0.934;AC=18;AF=0.321;AN=56;BaseQRankSum=8.454;DP=1050;FS=3.655;HRun=0;HaplotypeScore=296.9380;InbreedingCoeff=0.4673;MQ=48.11;MQ0=24;MQRankSum=-5.400;QD=7.72;ReadPosRankSum=-5.109;VQSLOD=1.5116;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:59,0:59:99:0,153,4440	0/1:12,0:11:12.96:13,0,436	0/0:52,1:12:35.51:0,36,659	0/0:60,0:17:8.81:0,9,704	0/0:31,0:32:24.96:0,25,797	0/0:11,6:12:1.61:0,2,3	1/1:10,14:21:5.42:30,5,0	0/0:58,0:57:99:0,132,3772	0/0:58,0:57:60.50:0,61,1309	1/1:25,16:39:1.63:1143,2,0	1/1:8,5:13:3.01:44,3,0	0/0:47,0:47:99:0,129,4118	0/0:46,0:46:99:0,132,3747	0/1:50,0:48:10.88:11,0,827	0/0:68,0:67:99:0,146,3393	0/0:62,0:63:99:0,150,3277	0/0:24,2:25:2.20:0,2,839	0/0:22,0:20:21.20:0,21,1009	0/1:17,1:15:10.80:124,0,11	0/1:9,7:16:1.59:37,0,2	0/1:51,2:41:5.49:218,0,5	0/0:45,0:44:99:0,114,3513	0/0:28,0:28:74.94:0,75,2280	0/0:43,0:42:99:0,111,3410	0/1:35,0:35:1.32:1,0,596	1/1:33,1:32:20.62:494,21,0	1/1:10,7:14:20.79:312,21,0	1/1:5,4:9:14.30:230,14,0
chr10	54010144	.	CACACACACACATACTCAT	C	4556.86	PASS	AB=0.874;AC=13;AF=0.232;AN=56;BaseQRankSum=11.308;DP=1090;FS=26.864;HRun=0;HaplotypeScore=480.3986;InbreedingCoeff=0.6758;MQ=47.92;MQ0=26;MQRankSum=-6.444;QD=20.43;ReadPosRankSum=-4.187;VQSLOD=1.2784;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:56:99:0,123,6475	0/0:13,0:12:21.07:0,21,1033	0/0:63,0:15:44.60:0,45,1032	0/0:68,0:18:40.26:0,40,1236	0/0:30,0:30:60:0,60,2379	0/0:16,1:12:0.89:0,1,2	0/1:30,0:27:99:127,0,155	0/0:53,0:52:99:0,111,4579	0/0:61,0:60:66.81:0,67,3420	1/1:39,0:37:66.52:1932,67,0	0/0:7,7:14:2.80:0,3,14	0/0:50,0:50:99:0,135,6946	0/0:49,0:49:99:0,135,6304	0/0:53,0:51:72.57:0,73,3053	0/0:63,0:62:99:0,147,7354	0/0:66,0:66:99:0,159,7787	0/0:27,0:26:18.43:0,18,2674	0/0:25,0:22:6.15:0,6,2866	1/1:9,12:18:37.62:612,38,0	0/1:16,0:16:0:0,0,0	1/1:55,0:42:8.97:119,9,0	0/0:51,0:50:99:0,126,6096	0/0:29,0:29:75.22:0,75,3434	0/0:43,0:42:99:0,105,4816	0/0:36,0:36:53.95:0,54,2012	0/1:15,23:36:61.57:1005,0,62	1/1:14,1:13:15.04:355,15,0	1/1:9,0:9:11.07:407,11,0
chr10	54010200	.	TAC	T	1021.62	PASS	AB=0.719;AC=2;AF=0.036;AN=56;BaseQRankSum=0.379;DP=1729;FS=0.629;HRun=0;HaplotypeScore=274.7648;InbreedingCoeff=-0.0432;MQ=46.78;MQ0=167;MQRankSum=0.556;QD=10.12;ReadPosRankSum=3.231;VQSLOD=3.1814;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:42:88.76:0,89,1333	0/0:27,0:25:72.25:0,72,1222	0/0:58,0:5:6.01:0,6,76	0/0:61,0:7:8.80:0,9,86	0/0:54,0:50:59.92:0,60,988	0/0:51,0:40:84.29:0,84,1421	0/0:58,0:24:28.61:0,29,469	0/0:32,0:14:33.05:0,33,413	0/0:99,0:88:99:0,116,2105	0/0:115,0:83:99:0,226,3723	0/0:35,0:29:54.18:0,54,912	0/0:52,0:51:99:0,138,2264	0/0:48,0:48:99:0,131,2215	0/0:89,0:78:99:0,102,1584	0/0:130,0:116:99:0,304,5104	0/0:102,0:96:99:0,255,4302	0/1:31,14:36:99:300,0,620	0/1:29,27:46:99:810,0,693	0/0:28,0:13:39.13:0,39,662	0/0:60,0:51:99:0,114,1927	0/0:165,0:126:99:0,201,3387	0/0:49,0:47:99:0,117,1984	0/0:23,0:21:41.25:0,41,938	0/0:48,0:45:90.19:0,90,1531	0/0:50,0:49:56.90:0,57,929	0/0:86,0:66:99:0,178,2972	0/0:42,0:35:81.26:0,81,1372	0/0:21,0:16:42.14:0,42,710
chr10	54010307	.	G	GCA	15366.02	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=-15.596;DP=1300;FS=0.843;HRun=0;HaplotypeScore=133.2790;InbreedingCoeff=0.9703;MQ=50.79;MQ0=67;MQRankSum=-1.143;QD=22.50;ReadPosRankSum=4.644;VQSLOD=5.5814;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:54.11:0,54,695	0/0:16,1:17:45.13:0,45,578	0/0:51,0:9:15.01:0,15,164	0/0:51,0:16:24.07:0,24,301	1/1:1,27:30:15.05:253,15,0	1/1:9,22:28:42.10:654,42,0	1/1:6,21:20:21.07:353,21,0	0/0:61,0:60:99:0,141,1728	1/1:14,48:51:46.54:1138,47,0	1/1:7,53:58:99:2260,144,0	1/1:2,14:16:24.08:405,24,0	0/0:71,0:71:99:0,170,2183	0/0:77,1:78:99:0,157,2512	1/1:11,48:54:66.23:1103,66,0	0/0:76,0:75:99:0,180,2263	0/0:54,0:54:99:0,138,1776	1/1:11,31:39:36.34:788,36,0	1/1:13,22:29:41.04:1103,41,0	1/1:7,21:23:36.26:886,36,0	1/1:13,20:33:51.10:802,51,0	1/1:20,83:88:97.83:1856,98,0	0/0:48,0:48:99:0,117,1430	0/0:29,0:29:66.21:0,66,847	0/0:42,1:42:96.31:0,96,1235	1/1:4,34:36:23.14:830,23,0	1/1:6,39:41:99:1491,99,0	1/1:6,30:35:3.54:619,4,0	1/1:3,23:25:16.82:824,17,0
chr10	54010416	.	CTCAT	C	499.08	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=8.053;DP=1180;FS=27.558;HRun=0;HaplotypeScore=182.9111;InbreedingCoeff=0.9223;MQ=52.57;MQ0=24;MQRankSum=1.431;QD=7.03;ReadPosRankSum=-4.877;VQSLOD=0.1391;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:58.51:0,59,2150	0/0:18,0:18:51.15:0,51,1347	0/0:41,0:16:23.55:0,24,841	0/0:59,0:32:71.85:0,72,1563	1/1:10,6:16:17.93:268,18,0	0/0:35,0:34:49.81:0,50,2038	0/0:30,0:28:75.26:0,75,1969	0/0:54,0:51:99:0,149,3739	1/1:15,9:23:12.04:199,12,0	0/0:69,0:69:99:0,205,5378	0/0:24,0:24:48.16:0,48,1305	0/0:62,0:62:99:0,179,4834	0/0:74,0:74:99:0,217,5737	1/1:7,8:13:8.85:115,9,0	0/0:73,0:73:99:0,202,5401	0/0:61,0:61:99:0,171,4693	0/0:40,0:38:42.85:0,43,2385	0/0:36,0:35:55.66:0,56,2370	0/0:27,0:24:72.23:0,72,1867	0/0:37,0:37:81.28:0,81,2130	0/0:91,0:89:99:0,243,6390	0/0:45,0:45:99:0,123,3335	0/0:33,0:33:93.31:0,93,2387	0/0:49,1:50:99:0,123,3371	1/1:4,12:16:3.48:60,3,0	0/0:66,0:66:99:0,196,5150	0/0:34,0:34:96.32:0,96,2607	0/0:10,0:10:30.10:0,30,868
chr10	54010516	.	T	TAC	9420.54	PASS	AB=0.732;AC=28;AF=0.500;AN=56;BaseQRankSum=-5.376;DP=1121;FS=6.499;HRun=0;HaplotypeScore=186.3547;InbreedingCoeff=0.6454;MQ=52.37;MQ0=37;MQRankSum=-0.516;QD=16.19;ReadPosRankSum=-2.539;VQSLOD=3.9481;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:45:73.05:0,73,838	0/0:17,0:18:41.96:0,42,471	0/0:51,0:10:2.87:0,3,15	0/0:60,0:10:1.87:0,2,29	1/1:20,0:26:10.11:59,10,0	1/1:9,27:34:12.61:672,13,0	1/1:10,20:29:42.14:660,42,0	0/0:42,0:38:58.58:0,59,630	1/1:33,0:42:18.60:159,19,0	1/1:26,36:60:3.53:1517,4,0	0/1:9,9:18:11.09:293,0,11	0/0:38,0:40:77.15:0,77,834	0/0:50,0:52:99:0,107,1168	1/1:32,0:39:19.09:136,19,0	0/0:51,0:53:99:0,120,1352	0/0:51,0:55:99:0,111,1247	1/1:24,0:36:54.96:461,55,0	0/1:18,1:20:16.06:147,0,16	1/1:16,10:20:36.12:548,36,0	0/1:12,30:41:7.13:833,0,7	0/1:42,20:64:71.48:1232,0,71	0/0:40,1:41:28.08:0,28,796	0/0:21,0:22:39.09:0,39,433	0/0:54,0:56:99:0,122,1382	1/1:18,0:27:18.51:89,19,0	1/1:14,28:41:44.21:1146,44,0	1/1:12,31:42:23.91:817,24,0	1/1:8,13:21:42.14:650,42,0
chr10	54013306	.	A	AT	13469.03	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=-16.623;DP=719;FS=2.312;HRun=3;HaplotypeScore=64.2223;InbreedingCoeff=0.9987;MQ=89.78;MQ0=0;MQRankSum=-4.776;QD=37.73;ReadPosRankSum=1.752;VQSLOD=5.3411;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,162,1943	0/0:10,0:10:30.09:0,30,360	0/0:36,0:36:76.06:0,76,947	0/0:18,0:18:42.08:0,42,451	1/1:0,21:21:57.19:798,57,0	1/1:0,22:22:60.20:840,60,0	1/1:0,19:19:42.14:588,42,0	0/0:30,0:30:90.22:0,90,1017	1/1:1,31:32:84.28:1176,84,0	1/1:3,25:28:75.21:999,75,0	1/1:1,22:23:66.13:880,66,0	0/0:30,0:30:90.28:0,90,1079	0/0:37,0:37:99:0,99,1154	1/1:0,29:29:81.27:1134,81,0	0/0:31,0:31:93.27:0,93,1104	0/0:23,0:23:66.18:0,66,765	1/1:2,28:30:81.27:1134,81,0	1/1:1,11:12:30.10:420,30,0	1/1:1,12:13:36.12:503,36,0	1/1:0,17:17:48.16:672,48,0	1/1:2,24:26:66.22:924,66,0	0/0:34,0:34:96.28:0,96,1140	0/0:25,0:25:72.21:0,72,852	0/0:34,0:34:93.19:0,93,1073	1/1:0,23:23:69.23:966,69,0	1/1:0,26:26:78.26:1091,78,0	1/1:1,29:30:78.26:1092,78,0	1/1:0,6:6:18.06:252,18,0
chr10	54013848	.	T	TACACACACACAC	7139.74	PASS	AB=1.000;AC=33;AF=0.589;AN=56;BaseQRankSum=2.051;DP=577;FS=14.719;HRun=0;HaplotypeScore=219.5894;InbreedingCoeff=0.7017;MQ=61.68;MQ0=6;MQRankSum=-8.978;QD=21.25;ReadPosRankSum=-4.701;VQSLOD=1.6245;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:62.85:0,63,1712	0/0:6,0:6:12.04:0,12,406	0/0:21,0:12:4.83:0,5,98	0/0:26,0:22:3.01:0,3,43	1/1:20,1:25:5.64:273,6,0	1/1:17,1:16:5.26:348,5,0	1/1:12,3:15:3.01:175,3,0	0/1:25,0:25:44.24:44,0,363	1/1:11,2:14:9:410,9,0	1/1:18,0:17:24.07:909,24,0	1/1:24,0:25:1.60:113,2,0	0/0:17,0:18:39.12:0,39,1192	0/0:19,0:19:36.12:0,36,1145	1/1:15,2:18:4.30:261,4,0	0/0:21,0:22:51.15:0,51,1373	0/0:20,0:20:39.13:0,39,1276	1/1:18,1:19:27.09:983,27,0	1/1:17,0:17:15.94:655,16,0	1/1:30,0:30:31.22:712,31,0	1/1:27,4:31:5.64:334,6,0	1/1:21,0:19:8.99:110,9,0	0/0:24,0:25:54.17:0,54,1591	0/0:14,0:13:27.09:0,27,865	0/0:21,0:21:36.12:0,36,1193	1/1:14,0:14:5.91:234,6,0	1/1:19,3:23:30.08:1106,30,0	1/1:13,0:12:12.02:399,12,0	1/1:6,0:6:3.90:73,4,0
chr10	54014480	.	CTGTA	C	5018.83	PASS	AB=1.000;AC=26;AF=0.464;AN=56;BaseQRankSum=0.931;DP=865;FS=1.657;HRun=0;HaplotypeScore=197.4372;InbreedingCoeff=0.7354;MQ=60.19;MQ0=17;MQRankSum=5.866;QD=12.24;ReadPosRankSum=-2.562;VQSLOD=4.0862;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:41:56.77:0,57,886	0/0:11,0:11:11.99:0,12,155	0/0:35,0:15:32.79:0,33,325	0/0:36,0:22:53.48:0,53,725	0/1:33,0:33:19.22:144,0,19	1/1:4,32:36:3.01:54,3,0	1/1:25,0:20:39.05:477,39,0	0/0:47,0:46:99:0,120,1462	1/1:21,2:23:30.82:276,31,0	1/1:8,35:42:99:1478,106,0	1/1:1,15:16:2.56:18,3,0	0/0:26,0:26:57.01:0,57,960	0/0:28,0:28:78.11:0,78,1251	0/1:26,0:26:13.15:13,0,124	0/0:33,0:33:51:0,51,738	0/0:37,0:37:68.10:0,68,879	0/0:32,0:32:6.25:0,6,472	0/0:23,0:23:27.47:0,27,510	1/1:5,22:26:68.78:776,69,0	1/1:1,29:30:2.92:54,3,0	1/1:1,40:41:6.02:98,6,0	0/0:42,0:42:99:0,108,1822	0/0:33,0:33:87.11:0,87,1291	0/0:29,0:29:87.26:0,87,1559	1/1:21,0:21:19.18:147,19,0	1/1:4,29:31:87.11:1189,87,0	1/1:3,30:32:9.03:141,9,0	1/1:2,21:23:9.03:154,9,0
chr10	54014496	.	CTGTA	C	1084.02	PASS	AB=0.988;AC=19;AF=0.352;AN=54;BaseQRankSum=4.926;DP=861;FS=19.334;HRun=0;HaplotypeScore=203.4320;InbreedingCoeff=0.4458;MQ=57.45;MQ0=30;MQRankSum=-0.805;QD=3.40;ReadPosRankSum=1.496;VQSLOD=1.5147;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:44:6.02:0,6,99	1/1:3,9:12:9.03:140,9,0	0/0:40,0:11:0:0,0,0	./.	0/1:29,0:29:20.35:124,0,20	0/0:35,0:35:3.63:0,4,69	0/0:21,0:16:14.99:0,15,167	0/0:50,0:45:17.80:0,18,123	1/1:22,0:22:26.36:251,26,0	0/0:41,0:40:16.86:0,17,298	0/0:15,0:15:0:0,0,0	0/0:25,0:25:10.29:0,10,370	0/0:26,0:26:29.09:0,29,371	0/1:26,0:26:26.44:26,0,122	1/1:15,19:34:15.05:233,15,0	1/1:14,17:31:12.04:186,12,0	1/1:16,0:32:8.98:72,9,0	1/1:20,0:21:4.61:35,5,0	0/0:31,0:29:18.65:0,19,345	0/0:29,0:29:3.95:0,4,224	0/0:49,0:49:19.17:0,19,263	0/0:35,0:35:59.99:0,60,729	0/1:30,0:30:10.72:11,0,345	0/1:31,0:31:10.37:10,0,490	1/1:20,0:20:16.19:122,16,0	0/0:32,0:31:23.47:0,23,326	0/1:29,2:31:51.20:51,0,94	0/0:31,0:31:11.20:0,11,214
chr10	54014743	.	CTG	C	2027.73	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.459;DP=710;FS=7.765;HRun=0;HaplotypeScore=86.8567;InbreedingCoeff=0.9997;MQ=81.86;MQ0=0;MQRankSum=-1.541;QD=38.99;ReadPosRankSum=2.423;VQSLOD=5.6212;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,147,2624	0/0:11,0:11:33.11:0,33,605	0/0:22,0:22:63.13:0,63,1062	0/0:24,0:24:57.08:0,57,870	0/0:24,0:24:66.21:0,66,1171	0/0:19,0:18:45.15:0,45,817	0/0:25,0:25:72.22:0,72,1286	0/0:29,0:29:84.27:0,84,1455	0/0:20,0:20:60.21:0,60,1092	0/0:27,0:27:72.24:0,72,1286	0/0:17,0:17:48.16:0,48,861	0/0:28,0:28:78.27:0,78,1429	0/0:25,0:25:69.22:0,69,1230	0/0:31,0:31:90.31:0,90,1644	0/0:34,0:34:93.32:0,93,1691	0/0:22,0:22:60.19:0,60,1052	1/1:0,35:35:99:1462,102,0	1/1:0,17:17:48.16:688,48,0	0/0:24,0:24:69.24:0,69,1265	0/0:17,0:17:51.17:0,51,926	0/0:56,0:56:99:0,157,2846	0/0:22,0:22:66.23:0,66,1192	0/0:12,0:12:36.12:0,36,647	0/0:34,0:34:90.31:0,90,1641	0/0:18,0:18:54.19:0,54,990	0/0:28,0:27:72.21:0,72,1253	0/0:24,0:24:69.24:0,69,1243	0/0:12,0:12:36.12:0,36,660
chr10	54014954	.	A	AC	2303.76	PASS	AB=1.000;AC=31;AF=0.554;AN=56;BaseQRankSum=2.661;DP=335;FS=9.680;HRun=1;HaplotypeScore=49.1325;InbreedingCoeff=0.6384;MQ=52.52;MQ0=11;MQRankSum=1.157;QD=11.24;ReadPosRankSum=2.930;VQSLOD=1.1048;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:26:63.55:0,64,568	0/0:6,0:6:17.99:0,18,186	0/0:6,0:2:2.98:0,3,22	0/0:3,0:3:4.69:0,5,19	1/1:18,0:17:7.29:234,7,0	1/1:13,0:11:26.97:254,27,0	0/1:10,0:10:3.73:94,0,4	0/0:26,0:25:60.80:0,61,471	0/1:6,0:6:18.71:19,0,23	1/1:8,1:9:25.17:233,25,0	1/1:6,7:13:9.21:157,9,0	0/0:13,0:13:24.68:0,25,180	0/0:4,0:4:8.93:0,9,64	1/1:14,0:14:1.54:15,2,0	0/0:6,0:6:18.01:0,18,197	0/1:8,0:7:7.22:7,0,55	1/1:7,15:20:5.15:122,5,0	1/1:4,13:17:2.29:43,2,0	1/1:15,0:14:27.83:296,28,0	1/1:10,0:9:14.90:138,15,0	1/1:7,1:8:14.70:143,15,0	0/0:10,0:10:26.61:0,27,211	0/0:22,0:22:55.72:0,56,559	0/0:6,0:6:12.01:0,12,122	1/1:13,1:14:29.76:277,30,0	1/1:4,0:2:3.01:33,3,0	1/1:7,1:7:14.62:103,15,0	1/1:15,1:14:32.80:336,33,0
chr10	54014955	.	C	CCAA	3602.55	PASS	AB=0.784;AC=29;AF=0.518;AN=56;BaseQRankSum=1.409;DP=348;FS=16.403;HRun=0;HaplotypeScore=59.6556;InbreedingCoeff=0.5589;MQ=54.45;MQ0=10;MQRankSum=-0.338;QD=16.83;ReadPosRankSum=1.136;VQSLOD=1.9105;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:28:56.49:0,56,704	0/0:6,0:6:18:0,18,230	0/0:6,0:2:3:0,3,29	0/0:4,0:4:5.37:0,5,33	1/1:2,13:18:31.71:517,32,0	1/1:1,1:12:27.07:359,27,0	0/1:1,0:12:26.38:120,0,26	0/0:25,0:25:60.02:0,60,480	1/1:3,0:7:10.72:72,11,0	1/1:2,0:10:12.49:204,12,0	1/1:9,0:13:12.41:136,12,0	0/0:12,0:13:25.22:0,25,158	0/0:5,0:5:8.85:0,9,62	0/1:2,7:14:8.77:108,0,9	0/0:6,0:6:17.94:0,18,200	0/1:6,0:6:27.19:27,0,62	0/1:20,0:20:34.68:105,0,35	0/1:15,0:16:6.80:17,0,7	1/1:4,0:15:39.86:373,40,0	1/1:1,0:10:18:224,18,0	1/1:2,1:8:14.95:182,15,0	0/0:10,0:10:9.87:0,10,207	0/0:19,0:22:53.41:0,53,693	0/0:6,0:6:11.79:0,12,145	1/1:2,12:16:33:586,33,0	1/1:1,1:2:3.01:42,3,0	1/1:2,0:9:14.99:146,15,0	1/1:3,0:14:32.41:384,32,0
chr10	54016266	.	T	TAAGGAGGCAAACTTAAATCTATA	2461.34	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=2.179;DP=712;FS=0.958;HRun=0;HaplotypeScore=387.2548;InbreedingCoeff=0.9297;MQ=71.89;MQ0=0;MQRankSum=-5.834;QD=36.74;ReadPosRankSum=-1.326;VQSLOD=1.1923;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:9,10:30:12.04:1128,12,0	0/0:14,0:14:33.08:0,33,1357	0/0:23,0:23:36.08:0,36,751	0/0:7,0:7:5.98:0,6,109	0/0:27,0:27:63.18:0,63,2872	0/0:23,0:23:48.13:0,48,2058	0/0:28,0:28:48.13:0,48,1859	0/0:42,0:42:72.20:0,72,2311	0/0:27,0:27:66.19:0,66,3373	0/0:30,0:30:57.20:0,57,3188	0/0:25,0:25:57.16:0,57,2865	0/0:23,0:23:51.17:0,51,2589	0/0:24,0:24:45.12:0,45,2019	0/0:26,0:26:57.17:0,57,2966	0/0:39,0:39:84.24:0,84,3931	0/0:30,0:30:78.23:0,78,3216	1/1:10,6:17:9.03:729,9,0	1/1:20,0:20:24.05:737,24,0	0/0:26,0:26:31.16:0,31,2292	0/0:26,0:26:69.21:0,69,3305	0/0:25,0:25:60.16:0,60,2672	0/0:30,0:30:75.17:0,75,3705	0/0:29,0:29:66.20:0,66,3449	0/0:25,0:25:63.16:0,63,3106	0/0:29,0:29:72.25:0,72,3635	0/0:31,0:31:63.22:0,63,3411	0/0:25,0:25:57.19:0,57,2759	0/0:11,0:11:30.03:0,30,1200
chr10	54017969	.	T	TCAGCATG	6270.78	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=9.310;DP=759;FS=13.517;HRun=0;HaplotypeScore=174.9358;InbreedingCoeff=0.9946;MQ=82.02;MQ0=0;MQRankSum=-10.705;QD=72.08;ReadPosRankSum=1.142;VQSLOD=4.2127;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:58:99:0,165,4273	0/0:13,0:13:39.11:0,39,914	0/0:36,0:36:81.53:0,82,2414	0/0:13,0:13:26.07:0,26,788	1/1:4,8:14:18.06:732,18,0	0/0:26,0:26:75.20:0,75,1877	0/0:28,0:28:81.28:0,81,2133	0/0:31,0:31:78.24:0,78,1899	1/1:4,16:23:51.18:2078,51,0	0/0:28,0:28:78.27:0,78,2024	0/0:27,0:27:69.24:0,69,1712	0/0:30,0:30:87.26:0,87,2219	0/0:37,0:37:99:0,108,2708	1/1:8,21:31:63.22:2570,63,0	0/0:43,0:43:99:0,123,3248	0/0:34,0:34:99:0,102,2629	0/0:26,0:26:75.24:0,75,1953	0/0:31,0:31:90.21:0,90,2229	0/0:22,0:22:66.23:0,66,1747	0/0:35,0:35:96.33:0,96,2561	0/0:23,0:23:69.24:0,69,1848	0/0:18,0:18:48.13:0,48,1220	0/0:24,0:24:69.24:0,69,1808	0/0:29,0:28:81.28:0,81,2110	1/1:7,8:19:24.08:891,24,0	0/0:29,0:29:81.23:0,81,1939	0/0:25,0:25:75.24:0,75,1965	0/0:6,0:6:18.06:0,18,483
chr10	54019258	.	TGAC	T	3603.26	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=13.239;DP=703;FS=4.070;HRun=0;HaplotypeScore=107.4492;InbreedingCoeff=0.9915;MQ=93.37;MQ0=0;MQRankSum=-3.710;QD=38.74;ReadPosRankSum=1.329;VQSLOD=4.8929;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,129,2887	0/0:18,0:18:51.17:0,51,1150	0/0:28,0:28:78.27:0,78,1733	0/0:33,0:33:85.50:0,85,1812	1/1:0,25:24:63.05:936,63,0	0/0:28,0:28:84.29:0,84,1909	0/0:25,0:24:69.22:0,69,1542	0/0:22,0:22:63.19:0,63,1291	1/1:0,18:18:48.16:818,48,0	0/0:34,0:34:99:0,102,2306	0/0:16,0:16:48.16:0,48,1056	0/0:20,0:20:60.21:0,60,1379	0/0:24,0:24:69.24:0,69,1570	1/1:2,26:28:66.18:1093,66,0	0/0:19,0:19:57.18:0,57,1245	0/0:23,0:23:69.24:0,69,1564	0/0:32,0:32:93.32:0,93,2113	0/0:26,0:26:78.27:0,78,1797	0/0:15,0:15:45.15:0,45,1036	0/0:27,0:27:75.26:0,75,1670	0/0:40,0:40:99:0,120,2683	0/0:33,0:33:96.24:0,96,2051	0/0:18,0:18:54.19:0,54,1223	0/0:33,0:33:96.33:0,96,2200	1/1:1,21:22:48.08:756,48,0	0/0:21,0:21:59.94:0,60,1325	0/0:24,0:24:72.23:0,72,1587	0/0:6,0:6:12.04:0,12,276
chr10	54019757	.	A	AT	2671.84	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-11.404;DP=617;FS=7.272;HRun=5;HaplotypeScore=64.0609;InbreedingCoeff=0.9910;MQ=61.23;MQ0=5;MQRankSum=0.771;QD=29.36;ReadPosRankSum=-4.811;VQSLOD=1.6068;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:66.16:0,66,709	0/0:7,0:6:18:0,18,181	0/0:17,0:10:21.04:0,21,221	0/0:15,0:10:21.05:0,21,220	0/0:27,0:27:63.14:0,63,669	0/0:24,0:19:45.11:0,45,483	0/0:24,0:23:57.14:0,57,613	1/1:6,36:41:99:1315,105,0	0/0:15,0:13:39.10:0,39,419	0/0:21,0:21:60.15:0,60,645	0/0:25,0:25:66.16:0,66,709	0/0:13,0:13:30.07:0,30,322	0/0:27,0:26:66.08:0,66,686	0/0:18,0:17:48.12:0,48,515	0/0:29,0:27:69.17:0,69,741	0/0:23,0:22:57.14:0,57,612	1/1:1,27:27:63.20:829,63,0	1/1:0,21:21:51.17:671,51,0	0/0:25,0:23:63.14:0,63,663	0/0:28,0:28:72.14:0,72,761	0/0:14,0:14:39.05:0,39,400	0/0:19,0:19:51.13:0,51,548	0/0:25,0:25:69.17:0,69,741	0/0:20,0:20:48.12:0,48,516	0/0:19,0:18:51.13:0,51,548	0/0:29,0:25:69.16:0,69,735	0/0:25,0:23:57.09:0,57,588	0/0:9,0:8:17.84:0,18,193
chr10	54021059	.	CAA	C	6915.09	PASS	AB=1.000;AC=28;AF=0.500;AN=56;BaseQRankSum=-6.674;DP=548;FS=4.262;HRun=5;HaplotypeScore=123.5032;InbreedingCoeff=0.8453;MQ=54.37;MQ0=17;MQRankSum=-3.157;QD=22.02;ReadPosRankSum=-2.208;VQSLOD=2.2519;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:26:49.09:49,0,629	0/0:12,0:12:32.28:0,32,497	0/0:16,0:8:14.41:0,14,201	0/0:17,0:10:19.12:0,19,277	0/0:35,0:35:87.38:0,87,627	1/1:10,11:19:54.15:661,54,0	1/1:9,9:18:48.14:600,48,0	1/1:23,10:31:78.04:839,78,0	0/0:20,0:20:58.42:0,58,428	1/1:16,4:20:48.12:553,48,0	1/1:16,11:23:62.96:732,63,0	0/0:18,0:17:37.01:0,37,474	0/0:14,0:14:24.73:0,25,412	0/0:20,0:20:38.69:0,39,211	0/1:18,0:17:3.57:4,0,470	0/0:23,0:22:42.06:0,42,729	1/1:9,4:12:29.50:254,29,0	1/1:16,4:20:4.02:341,4,0	1/1:14,3:16:16.98:396,17,0	1/1:17,12:25:62.91:658,63,0	1/1:8,0:5:9.02:102,9,0	0/0:16,0:16:39.11:0,39,645	0/0:13,0:13:30.04:0,30,414	0/0:15,0:15:42.11:0,42,653	0/0:15,0:15:34.09:0,34,174	1/1:11,17:27:73.98:833,74,0	1/1:19,4:23:49.34:538,49,0	1/1:10,3:13:32.87:355,33,0
chr10	54021061	.	A	AAC	7835.66	PASS	AB=0.898;AC=27;AF=0.482;AN=56;BaseQRankSum=-6.970;DP=542;FS=0.732;HRun=0;HaplotypeScore=124.6709;InbreedingCoeff=0.7983;MQ=54.88;MQ0=17;MQRankSum=-3.123;QD=25.03;ReadPosRankSum=-2.429;VQSLOD=5.2282;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:24,2:26:99:108,0,428	0/0:12,0:12:35.17:0,35,442	0/0:15,0:7:14.39:0,14,183	0/0:17,0:10:6.91:0,7,230	0/0:35,0:35:91.45:0,91,1144	1/1:15,7:20:57.12:794,57,0	1/1:14,5:19:44.43:570,44,0	1/1:24,10:32:81.51:1027,82,0	0/0:20,0:20:60.08:0,60,766	1/1:7,12:19:48.08:704,48,0	1/1:22,4:22:62.45:775,62,0	0/0:17,0:16:45.07:0,45,584	0/0:13,0:13:33.06:0,33,413	0/0:20,0:20:40.94:0,41,530	0/1:17,1:17:17.03:17,0,398	0/0:22,0:21:42.11:0,42,597	1/1:13,1:13:29.95:318,30,0	0/1:14,4:18:0.20:448,0,0	1/1:9,9:17:19.66:449,20,0	1/1:26,2:24:54:566,54,0	1/1:4,3:4:8.98:125,9,0	0/0:15,0:15:39.10:0,39,558	0/0:13,0:13:30.05:0,30,379	0/0:15,0:15:42.14:0,42,608	0/0:15,0:15:35.77:0,36,440	1/1:23,6:28:72.77:1000,73,0	1/1:16,7:23:50.05:671,50,0	1/1:12,0:12:31.47:263,31,0
chr10	54021067	.	AAC	A	2783.79	PASS	AB=0.990;AC=13;AF=0.232;AN=56;BaseQRankSum=2.171;DP=535;FS=8.630;HRun=0;HaplotypeScore=139.9800;InbreedingCoeff=0.5165;MQ=56.39;MQ0=18;MQRankSum=0.897;QD=16.18;ReadPosRankSum=4.338;VQSLOD=3.0134;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:34.11:0,34,410	0/0:11,0:11:33.10:0,33,381	0/1:15,0:6:2.58:3,0,62	0/0:19,0:11:17.24:0,17,107	1/1:1,35:36:88.99:1075,89,0	0/0:21,0:19:49.41:0,49,312	0/1:17,0:17:4.03:4,0,143	0/0:34,0:32:85.55:0,86,559	1/1:5,14:19:30.10:651,30,0	0/0:16,0:16:38.37:0,38,273	0/0:29,0:25:60.87:0,61,375	0/1:17,0:16:77.97:78,0,92	0/1:14,0:14:27.99:28,0,110	1/1:0,19:19:39.13:550,39,0	0/0:19,0:18:41.81:0,42,440	0/0:24,0:23:44.76:0,45,488	0/0:14,0:13:13.47:0,13,133	0/0:16,0:16:24.32:0,24,211	0/0:18,0:16:19.54:0,20,151	0/0:25,0:21:52.77:0,53,375	0/0:9,0:6:13.94:0,14,76	0/0:15,0:15:21.83:0,22,221	0/0:12,0:12:10.72:0,11,93	0/0:14,0:14:6.05:0,6,201	1/1:0,15:15:36.12:524,36,0	0/0:29,1:29:25.05:0,25,403	0/1:19,1:20:42.72:43,0,139	0/0:13,0:13:32.12:0,32,248
chr10	54021068	.	AC	A	2117.08	PASS	AB=0.913;AC=15;AF=0.268;AN=56;BaseQRankSum=3.909;DP=533;FS=26.005;HRun=1;HaplotypeScore=134.0450;InbreedingCoeff=0.3680;MQ=56.35;MQ0=18;MQRankSum=1.349;QD=10.97;ReadPosRankSum=3.927;VQSLOD=0.4316;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:32.72:0,33,312	0/0:11,0:11:32.99:0,33,291	0/1:14,1:6:21.56:22,0,61	0/0:17,1:11:11.29:0,11,91	1/1:35,0:35:88.82:776,89,0	0/0:21,0:19:41.20:0,41,259	0/0:17,0:17:2.82:0,3,116	0/0:34,0:32:75.79:0,76,486	1/1:18,0:18:30.05:462,30,0	0/0:16,0:16:37.43:0,37,255	0/0:30,0:26:51.34:0,51,307	0/1:15,1:15:53.32:123,0,53	0/1:13,1:14:54.34:54,0,80	1/1:19,0:19:39.05:374,39,0	0/0:19,0:18:39.73:0,40,338	0/0:24,0:23:43.52:0,44,382	0/0:14,0:13:28.20:0,28,171	0/0:16,0:16:42.93:0,43,260	0/0:18,0:16:20.46:0,20,120	0/0:24,1:21:39.25:0,39,302	0/0:10,0:7:13.75:0,14,74	0/1:14,1:15:2.96:3,0,136	0/1:7,5:12:5.72:6,0,81	0/1:13,1:14:77.67:78,0,131	1/1:15,0:15:36.08:363,36,0	0/0:30,0:29:26.80:0,27,352	0/1:20,0:20:34.62:35,0,149	0/0:13,0:13:28.50:0,29,198
chr10	54021071	.	A	AAC	4211	PASS	AB=1.000;AC=39;AF=0.696;AN=56;BaseQRankSum=3.018;DP=556;FS=0.449;HRun=0;HaplotypeScore=143.2785;InbreedingCoeff=0.6977;MQ=56.03;MQ0=19;MQRankSum=-1.635;QD=9.53;ReadPosRankSum=1.660;VQSLOD=4.1755;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:17,10:27:38.30:450,38,0	1/1:11,0:11:30.61:140,31,0	0/0:19,0:6:8.19:0,8,97	0/0:21,0:11:9.36:0,9,86	0/1:36,0:36:0.25:94,0,0	1/1:21,0:19:38:246,38,0	1/1:15,0:15:37.02:198,37,0	1/1:35,0:33:66.16:510,66,0	1/1:18,0:18:20.92:123,21,0	1/1:17,0:17:33.79:202,34,0	1/1:30,0:26:11.06:249,11,0	0/0:16,0:15:41.47:0,41,405	0/0:14,0:14:33.02:0,33,336	1/1:19,0:19:6.45:23,6,0	1/1:19,0:18:35.53:162,36,0	1/1:25,0:24:14.26:118,14,0	1/1:14,0:13:12.71:165,13,0	0/1:16,0:16:24.04:186,0,24	1/1:19,0:17:3.10:166,3,0	1/1:27,0:23:6.74:276,7,0	1/1:11,0:8:13.51:77,14,0	0/0:15,0:15:34.24:0,34,350	0/0:14,0:14:17.91:0,18,153	0/0:15,0:15:44.96:0,45,475	0/1:18,0:18:12.68:13,0,19	1/1:30,0:29:29.74:300,30,0	1/1:21,0:21:26.94:209,27,0	1/1:13,0:13:29.85:306,30,0
chr10	54021072	.	A	AC	4193.46	PASS	AB=0.947;AC=41;AF=0.732;AN=56;BaseQRankSum=5.875;DP=550;FS=8.770;HRun=0;HaplotypeScore=130.3734;InbreedingCoeff=0.6726;MQ=56.01;MQ0=19;MQRankSum=-1.140;QD=9.14;ReadPosRankSum=3.552;VQSLOD=3.7972;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:18,9:27:45.38:326,45,0	1/1:0,11:11:33.07:337,33,0	0/0:19,0:6:8.06:0,8,100	0/1:20,0:10:2.11:2,0,75	1/1:37,0:37:28.30:202,28,0	1/1:21,1:20:28.33:196,28,0	1/1:14,1:15:26.56:115,27,0	1/1:26,8:32:68.04:464,68,0	1/1:18,0:18:43.14:198,43,0	1/1:15,1:16:22.70:113,23,0	1/1:27,3:26:21.97:206,22,0	0/0:16,0:15:41.96:0,42,394	0/0:13,0:13:33.03:0,33,316	1/1:19,0:19:25.29:85,25,0	1/1:2,16:17:38.44:373,38,0	1/1:6,20:25:33.21:340,33,0	1/1:9,4:12:6.10:110,6,0	0/1:13,3:16:34.19:154,0,34	1/1:17,1:16:3.63:97,4,0	1/1:22,4:22:23.68:214,24,0	1/1:10,1:8:14.27:85,14,0	0/0:15,0:15:35.93:0,36,331	0/0:13,0:13:20.59:0,21,173	0/0:15,0:15:38.63:0,39,383	0/1:18,0:18:40.32:60,0,40	1/1:28,2:29:18.93:211,19,0	1/1:20,1:21:1.09:103,1,0	1/1:8,5:13:27.10:200,27,0
chr10	54021075	.	A	AC	975.93	PASS	AB=0.805;AC=11;AF=0.196;AN=56;BaseQRankSum=4.648;DP=545;FS=4.668;HRun=0;HaplotypeScore=141.5433;InbreedingCoeff=0.5912;MQ=56.43;MQ0=15;MQRankSum=2.294;QD=6.55;ReadPosRankSum=3.842;VQSLOD=3.4615;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:21,7:28:40.02:144,0,40	0/0:11,0:11:28.86:0,29,120	0/0:19,0:6:14.84:0,15,120	0/0:16,0:8:2.27:0,2,88	1/1:37,0:37:4.97:308,5,0	0/0:22,0:20:54.76:0,55,434	0/0:15,0:15:43.70:0,44,307	0/0:25,8:31:33.42:0,33,250	1/1:17,0:17:29.50:196,30,0	0/0:18,0:18:33.64:0,34,286	0/0:27,0:25:38.53:0,39,417	0/0:16,0:15:41.90:0,42,387	0/0:12,0:12:30.03:0,30,292	1/1:18,0:18:32.82:166,33,0	0/0:20,0:19:16.54:0,17,138	0/0:24,0:23:42.29:0,42,225	0/1:9,4:12:24.62:25,0,37	0/1:14,3:17:8.61:9,0,109	0/0:19,0:17:44.30:0,44,290	0/0:25,0:23:54.42:0,54,386	0/0:11,0:8:14.02:0,14,108	0/0:16,0:16:38.96:0,39,357	0/0:13,0:13:26.40:0,26,204	0/0:14,0:14:35.66:0,36,362	1/1:19,0:19:46.18:293,46,0	0/0:31,0:30:43.39:0,43,428	0/0:20,0:20:34.28:0,34,310	0/0:13,1:14:11.51:0,12,132
chr10	54021399	.	T	TGATAGCTGG	36539.02	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=-6.219;DP=504;FS=0.377;HRun=0;HaplotypeScore=127.9165;InbreedingCoeff=0.9786;MQ=75.03;MQ0=0;MQRankSum=-15.661;QD=101.22;ReadPosRankSum=2.163;VQSLOD=5.4038;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,15:30:57.10:2423,57,0	1/1:1,4:7:11.73:586,12,0	0/0:22,0:22:65.25:0,65,1497	0/0:18,0:18:51.18:0,51,1524	1/1:9,8:17:24.08:1170,24,0	1/1:5,13:22:51.09:2160,51,0	1/1:11,4:17:30.06:1324,30,0	1/1:24,4:33:90.28:3590,90,0	1/1:5,10:15:39.05:1590,39,0	1/1:6,9:15:42.14:2000,42,0	1/1:2,14:18:33.11:1609,33,0	0/0:27,0:27:78.23:0,78,2224	0/0:20,0:20:54.19:0,54,1634	1/1:6,8:15:32.98:1227,33,0	1/1:5,13:20:51.13:2261,51,0	1/1:3,15:20:51.18:2371,51,0	1/1:5,12:18:39.13:1856,39,0	1/1:7,7:16:36.12:1603,36,0	1/1:9,7:19:54.17:2011,54,0	1/1:5,6:11:21.07:986,21,0	1/1:7,1:9:15.01:606,15,0	0/0:19,0:19:54.19:0,54,1675	0/0:14,0:14:39.13:0,39,1210	0/0:23,0:23:69.21:0,69,1890	1/1:1,7:9:21.07:1026,21,0	1/1:1,12:13:39.13:1907,39,0	1/1:5,23:29:81.24:3794,81,0	1/1:0,3:4:9.03:440,9,0
chr10	54021740	.	ATG	A	1595.86	PASS	AB=0.820;AC=32;AF=0.615;AN=52;BaseQRankSum=4.480;DP=488;FS=8.432;HRun=0;HaplotypeScore=91.3437;InbreedingCoeff=0.7977;MQ=55.70;MQ0=18;MQRankSum=0.204;QD=5.85;ReadPosRankSum=2.634;VQSLOD=2.3933;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:7,0:15:0:0,0,0	1/1:3,2:5:3.60:98,4,0	0/0:26,0:14:14.15:0,14,168	0/0:35,0:21:9.81:0,10,122	1/1:14,0:14:14.79:97,15,0	./.	1/1:20,1:20:23.82:180,24,0	0/0:35,0:33:42.16:0,42,304	1/1:9,0:9:11.80:75,12,0	1/1:18,1:17:28.99:212,29,0	1/1:13,1:14:17.78:117,18,0	0/0:18,0:17:17.95:0,18,147	0/0:16,0:15:20.76:0,21,145	1/1:11,0:10:14.87:104,15,0	1/1:3,17:20:5.99:51,6,0	1/1:9,15:23:11.98:124,12,0	0/0:15,0:15:14.93:0,15,115	0/0:9,0:9:17.98:0,18,175	1/1:9,0:13:11.90:84,12,0	./.	1/1:19,0:18:23.86:176,24,0	0/0:16,0:15:7.83:0,8,136	0/1:24,0:24:4.63:5,0,109	0/0:16,0:16:8.99:0,9,74	1/1:13,1:14:17.72:118,18,0	1/1:20,1:20:29.66:215,30,0	1/1:7,2:25:10.76:70,11,0	1/1:3,0:3:8.94:65,9,0
chr10	54021763	.	T	TGAGA	673.53	PASS	AB=1.000;AC=36;AF=0.857;AN=42;BaseQRankSum=0.952;DP=476;FS=0.000;HRun=0;HaplotypeScore=199.5195;InbreedingCoeff=0.1538;MQ=42.61;MQ0=19;MQRankSum=-0.371;QD=1.95;ReadPosRankSum=-0.998;VQSLOD=2.4180;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:19,0:18:0:0,0,0	1/1:5,0:5:4.48:21,4,0	./.	./.	./.	1/1:16,0:15:2.37:8,2,0	1/1:14,0:13:6.26:28,6,0	1/1:26,0:23:3.48:33,3,0	1/1:19,0:19:6.93:56,7,0	0/1:25,0:23:0.06:112,0,0	./.	0/0:18,0:17:5.87:0,6,35	1/1:16,0:15:7.32:49,7,0	./.	1/1:22,0:22:1.82:5,2,0	0/1:25,0:23:6.67:17,0,7	1/1:10,0:10:2.74:12,3,0	1/1:6,0:6:2.99:24,3,0	1/1:8,0:8:3.01:48,3,0	1/1:14,0:14:0.47:1,0,0	1/1:19,0:18:2.97:20,3,0	1/1:20,0:19:0.16:33,0,0	./.	./.	1/1:21,0:21:0.47:1,0,0	0/1:26,0:25:4.45:61,0,4	1/1:31,0:31:15.11:237,15,0	1/1:4,0:4:0.89:2,1,0
chr10	54021782	.	G	GAC	348.22	PASS	AB=0.973;AC=17;AF=0.315;AN=54;BaseQRankSum=3.488;DP=439;FS=0.952;HRun=0;HaplotypeScore=94.7346;InbreedingCoeff=0.1727;MQ=39.24;MQ0=28;MQRankSum=-0.243;QD=1.74;ReadPosRankSum=1.499;VQSLOD=1.9071;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:1.25:0,1,3	1/1:5,0:5:5.40:21,5,0	0/1:22,0:4:11.15:11,0,25	0/0:23,0:2:2.82:0,3,18	0/0:22,0:22:5.91:0,6,38	1/1:16,1:15:0.89:2,1,0	1/1:10,0:9:6.74:39,7,0	0/0:21,0:20:20.66:0,21,222	0/0:20,0:20:11.60:0,12,65	0/1:20,1:19:57.91:58,0,98	./.	0/0:15,0:14:8.80:0,9,92	0/0:15,0:14:0.31:0,0,47	0/0:15,0:14:9.43:0,9,70	1/1:20,0:20:6.87:51,7,0	0/1:20,1:19:1.93:60,0,2	0/0:4,0:3:2.61:0,3,16	0/0:3,0:3:6.47:0,6,52	0/0:10,0:10:9.34:0,9,135	1/1:11,1:12:2.03:6,2,0	0/1:13,0:12:6.59:31,0,7	0/0:23,0:23:11.47:0,11,73	0/0:15,0:15:5.95:0,6,43	0/0:7,0:7:2.99:0,3,24	0/0:17,0:17:8.99:0,9,74	0/1:25,1:25:99:131,0,184	0/1:27,2:29:78.96:79,0,130	0/1:4,0:3:0.38:0,0,9
chr10	54021788	.	G	GAC	80.92	PASS	AB=0.982;AC=15;AF=0.288;AN=52;BaseQRankSum=4.057;DP=413;FS=1.358;HRun=0;HaplotypeScore=87.9708;InbreedingCoeff=-0.0216;MQ=38.49;MQ0=24;MQRankSum=-0.871;QD=0.41;ReadPosRankSum=1.573;VQSLOD=1.2474;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:19:2.87:15,3,0	0/1:5,0:5:8.21:8,0,29	0/1:21,0:3:11.15:11,0,24	0/0:21,0:3:2.72:0,3,14	0/0:21,0:21:2.80:0,3,13	1/1:15,1:14:1.82:5,2,0	0/1:9,0:8:5.41:12,0,5	0/1:22,0:21:7.36:7,0,211	0/0:20,0:20:11.03:0,11,60	0/1:19,1:18:60.50:61,0,133	./.	0/0:14,0:13:5.71:0,6,67	0/0:14,0:13:1.36:0,1,50	0/0:14,0:13:4.19:0,4,22	0/0:20,0:20:3.17:0,3,13	0/1:21,0:19:3.85:4,0,27	0/1:3,0:2:0:0,0,0	0/0:3,0:3:6.39:0,6,43	0/0:10,0:10:23.76:0,24,153	0/1:10,1:11:0.03:1,0,0	0/1:12,0:11:10.42:10,0,19	0/0:20,0:20:8.39:0,8,51	0/1:13,0:13:0:0,0,0	./.	0/0:13,0:13:5.99:0,6,50	0/0:26,0:25:29.22:0,29,239	0/1:24,2:26:66.62:67,0,116	0/0:3,0:2:2.98:0,3,21
chr10	54022909	.	G	GTTAT	4523.58	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=11.342;DP=822;FS=4.345;HRun=0;HaplotypeScore=146.2350;InbreedingCoeff=0.9984;MQ=90.15;MQ0=0;MQRankSum=-12.135;QD=63.71;ReadPosRankSum=0.234;VQSLOD=6.2429;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,147,3030	1/1:2,10:12:33.11:765,33,0	0/0:40,0:40:99:0,111,2108	0/0:25,0:25:69.16:0,69,1263	0/0:34,0:34:99:0,99,2046	0/0:23,0:23:69.24:0,69,1421	0/0:21,0:21:60.20:0,60,1222	0/0:41,0:41:99:0,117,2349	0/0:25,0:25:75.26:0,75,1533	0/0:34,0:33:99:0,99,2031	0/0:19,0:19:57.20:0,57,1183	0/0:44,0:44:99:0,129,2628	0/0:42,0:42:99:0,123,2567	0/0:32,0:32:96.33:0,96,2013	1/1:7,32:39:99:2520,111,0	1/1:4,16:20:39.35:1239,39,0	0/0:18,0:18:54.19:0,54,1132	0/0:20,0:20:60.21:0,60,1257	0/0:21,0:21:63.22:0,63,1311	0/0:30,0:30:87.29:0,87,1785	0/0:27,0:27:81.26:0,81,1652	0/0:33,0:33:96.32:0,96,1956	0/0:22,0:22:66.22:0,66,1346	0/0:50,0:50:99:0,147,2866	0/0:29,0:29:84.27:0,84,1690	0/0:36,0:36:99:0,105,2190	0/0:27,0:27:78.25:0,78,1564	0/0:7,0:7:21.07:0,21,416
chr10	54022910	.	G	GA	1557.32	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=13.502;DP=826;FS=4.257;HRun=0;HaplotypeScore=106.1280;InbreedingCoeff=0.9985;MQ=89.62;MQ0=0;MQRankSum=-11.204;QD=21.93;ReadPosRankSum=0.015;VQSLOD=5.0658;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,153,2044	1/1:2,10:12:32.92:288,33,0	0/0:38,0:38:99:0,111,1413	0/0:26,0:26:66.17:0,66,854	0/0:34,0:34:99:0,99,1344	0/0:23,0:23:69.21:0,69,946	0/0:21,0:21:63.16:0,63,841	0/0:41,0:41:99:0,123,1618	0/0:26,0:26:75.25:0,75,1047	0/0:34,0:33:99:0,99,1321	0/0:20,0:20:57.18:0,57,780	0/0:44,0:44:99:0,132,1824	0/0:42,0:42:99:0,126,1725	0/0:33,0:33:96.30:0,96,1320	1/1:7,31:39:99:934,109,0	1/1:4,16:20:57.27:478,57,0	0/0:19,0:19:54.18:0,54,753	0/0:20,0:20:60.20:0,60,839	0/0:21,0:21:63.21:0,63,881	0/0:31,0:31:90.28:0,90,1232	0/0:28,0:28:81.25:0,81,1097	0/0:32,0:32:96.31:0,96,1312	0/0:22,0:22:66.19:0,66,900	0/0:50,0:50:99:0,147,1968	0/0:30,0:30:87.25:0,87,1166	0/0:36,0:36:99:0,108,1493	0/0:26,0:26:78.24:0,78,1072	0/0:7,0:7:21.07:0,21,293
chr10	54034635	.	G	GT	903.46	PASS	AB=0.909;AC=36;AF=0.947;AN=38;BaseQRankSum=-2.693;DP=78;FS=0.000;HRun=0;HaplotypeScore=19.5554;InbreedingCoeff=-0.2250;MQ=131.44;MQ0=0;MQRankSum=-1.485;QD=14.57;ReadPosRankSum=-1.535;VQSLOD=3.7058;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/1:10,0:10:13.84:121,0,14	0/1:7,0:9:36.96:109,0,37	./.	1/1:3,0:3:2.99:24,3,0	1/1:1,1:2:3.01:37,3,0	1/1:3,0:3:2.93:27,3,0	1/1:5,0:5:2.99:24,3,0	1/1:2,0:2:6.02:76,6,0	1/1:0,2:2:3.01:47,3,0	1/1:4,0:4:6.01:71,6,0	1/1:0,2:2:2.97:20,3,0	1/1:2,0:2:3.01:46,3,0	./.	./.	./.	./.	1/1:2,0:2:6.01:69,6,0	1/1:1,0:1:3.01:39,3,0	1/1:2,2:4:3.01:47,3,0	1/1:0,3:3:6.02:93,6,0	./.	./.	1/1:0,3:3:3.01:47,3,0	1/1:1,0:1:3:27,3,0	1/1:2,0:2:2.99:24,3,0	1/1:1,1:2:3.01:46,3,0
chr10	54035064	.	TGGTGTGGTGC	T	3516.91	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=11.001;DP=991;FS=5.439;HRun=0;HaplotypeScore=320.4502;InbreedingCoeff=0.9864;MQ=73.61;MQ0=2;MQRankSum=-8.933;QD=28.36;ReadPosRankSum=2.453;VQSLOD=1.9965;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:59,0:59:99:0,150,6198	0/0:6,0:6:18.06:0,18,782	0/0:71,0:50:73.80:0,74,1687	0/0:69,0:55:27.42:0,27,1148	1/1:13,23:36:15.05:383,15,0	0/0:23,0:23:54.19:0,54,2474	0/0:32,0:32:78.25:0,78,3395	0/0:26,0:26:45.15:0,45,1650	1/1:9,25:34:45.15:1357,45,0	0/0:31,0:31:59.93:0,60,2361	0/0:22,0:22:51.16:0,51,2200	0/0:35,0:35:81.26:0,81,3499	0/0:35,0:35:81.22:0,81,3367	1/1:16,20:36:45.10:1262,45,0	0/0:27,0:27:54.12:0,54,2251	0/0:24,0:24:48.11:0,48,2048	0/0:70,0:70:99:0,159,6967	0/0:32,0:32:81.28:0,81,3383	0/0:17,0:17:42.14:0,42,1473	0/0:25,0:25:63.20:0,63,2687	0/0:77,0:77:99:0,181,7351	0/0:29,0:29:66.23:0,66,3145	0/0:21,0:21:45.14:0,45,2095	0/0:64,0:64:99:0,141,6542	1/1:3,15:18:18.06:515,18,0	0/0:35,0:35:87.18:0,87,3323	0/0:28,0:28:72.25:0,72,3501	0/0:8,0:8:15.05:0,15,740
chr10	54036023	.	ATGT	A	4286.47	PASS	AB=0.994;AC=44;AF=0.786;AN=56;BaseQRankSum=1.688;DP=646;FS=24.122;HRun=0;HaplotypeScore=121.2835;InbreedingCoeff=0.1589;MQ=67.39;MQ0=2;MQRankSum=0.386;QD=7.35;ReadPosRankSum=2.139;VQSLOD=2.3736;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:24:2.98:21,3,0	1/1:15,0:15:24.41:194,24,0	0/1:19,1:17:13.95:14,0,20	0/0:35,0:33:8.63:0,9,172	0/1:31,0:31:50.80:51,0,59	0/1:19,0:19:0.33:60,0,0	0/1:17,0:17:0.08:38,0,0	0/0:27,0:27:8.54:0,9,76	1/1:17,0:17:14.78:96,15,0	1/1:29,0:29:33.63:319,34,0	1/1:22,0:22:2.59:94,3,0	1/1:12,14:26:36.12:484,36,0	1/1:3,12:15:21.07:279,21,0	0/1:22,0:22:7.24:73,0,7	1/1:26,0:26:25.25:355,25,0	1/1:27,0:27:28.90:398,29,0	0/1:20,0:20:31.25:31,0,43	0/1:16,0:16:2.85:3,0,90	1/1:28,0:26:14.60:170,15,0	1/1:19,0:18:8.94:75,9,0	1/1:18,2:20:3.90:41,4,0	1/1:15,14:29:18.06:242,18,0	1/1:22,2:24:26.83:304,27,0	1/1:8,15:23:15.05:202,15,0	0/1:25,0:25:37.43:134,0,37	1/1:35,0:35:40.71:385,41,0	1/1:24,0:24:8.42:130,8,0	1/1:10,0:10:11.97:95,12,0
chr10	54036056	.	TTGTTGC	T	6467.93	PASS	AB=1.000;AC=32;AF=0.571;AN=56;BaseQRankSum=0.822;DP=595;FS=25.957;HRun=0;HaplotypeScore=121.5858;InbreedingCoeff=0.5536;MQ=53.46;MQ0=9;MQRankSum=-0.836;QD=17.07;ReadPosRankSum=-2.057;VQSLOD=2.5610;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:19:3.01:52,3,0	0/0:19,0:19:22.17:0,22,88	0/0:23,0:15:15.19:0,15,306	0/0:27,0:22:34.84:0,35,554	0/1:27,0:27:33.94:201,0,34	1/1:2,19:21:12.04:249,12,0	1/1:0,16:16:12.04:199,12,0	0/1:19,0:19:3.99:245,0,4	1/1:14,0:14:15.05:202,15,0	1/1:1,21:22:60.82:879,61,0	1/1:2,16:18:23.86:292,24,0	0/0:22,0:22:53.81:0,54,473	0/0:20,0:20:41.77:0,42,349	0/1:20,0:20:6.84:178,0,7	0/0:29,0:29:43.66:0,44,180	0/0:27,0:27:47.49:0,47,223	1/1:16,0:16:16.19:282,16,0	0/1:18,0:18:14.67:268,0,15	1/1:4,17:18:42.09:571,42,0	1/1:2,19:20:20.83:230,21,0	1/1:18,0:18:50.74:489,51,0	0/0:24,0:24:42.47:0,42,322	0/1:25,0:25:77.29:77,0,197	0/0:25,0:25:38.66:0,39,318	0/1:31,0:30:36.85:324,0,37	1/1:1,21:22:60.10:935,60,0	1/1:2,23:25:23.84:511,24,0	1/1:0,6:6:12.04:286,12,0
chr10	54036059	.	TTGC	T	6171.34	PASS	AB=1.000;AC=47;AF=0.839;AN=56;BaseQRankSum=9.962;DP=583;FS=21.667;HRun=0;HaplotypeScore=97.4657;InbreedingCoeff=0.2824;MQ=57.62;MQ0=9;MQRankSum=-1.763;QD=11.51;ReadPosRankSum=6.211;VQSLOD=2.1783;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:19:3.01:31,3,0	1/1:0,19:19:26.70:402,27,0	0/0:23,0:16:34.30:0,34,380	0/0:24,0:19:35.09:0,35,392	1/1:27,0:27:23.53:150,24,0	1/1:19,0:19:8.41:92,8,0	1/1:16,0:16:6.73:49,7,0	1/1:3,15:18:43.69:330,44,0	1/1:13,0:13:14.88:106,15,0	1/1:21,0:21:55.37:454,55,0	1/1:16,0:16:17.72:118,18,0	0/1:20,0:20:69.09:153,0,69	0/1:21,0:21:89.49:89,0,133	1/1:19,0:19:14.86:104,15,0	1/1:2,27:29:45.15:718,45,0	1/1:1,27:28:51.17:813,51,0	1/1:15,0:15:29.88:244,30,0	1/1:21,0:21:44.17:343,44,0	1/1:20,0:17:41.74:294,42,0	1/1:20,0:19:18.22:124,18,0	1/1:19,0:19:53.69:427,54,0	0/1:24,0:24:95.38:95,0,125	0/1:24,0:24:49.79:50,0,169	0/1:27,0:27:36.77:37,0,215	1/1:30,0:29:26.76:188,27,0	1/1:21,0:21:53.05:424,53,0	1/1:24,0:24:23.14:212,23,0	1/1:6,0:6:12.03:124,12,0
chr10	54037111	.	A	AG	4362.52	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-2.838;DP=585;FS=3.740;HRun=0;HaplotypeScore=83.1295;InbreedingCoeff=0.9988;MQ=85.52;MQ0=0;MQRankSum=-0.763;QD=43.63;ReadPosRankSum=2.829;VQSLOD=5.3463;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:69.23:0,69,965	0/0:10,0:10:27.07:0,27,359	0/0:30,0:30:84.21:0,84,1121	0/0:13,0:13:33:0,33,426	1/1:0,30:30:87.30:1391,87,0	0/0:27,0:27:81.27:0,81,1132	0/0:11,0:11:33.11:0,33,460	0/0:18,0:18:54.17:0,54,739	1/1:1,25:26:69.24:1103,69,0	0/0:27,0:27:78.26:0,78,1082	0/0:16,0:16:45.13:0,45,611	0/0:25,0:25:75.25:0,75,1049	0/0:14,0:14:42.14:0,42,587	1/1:0,20:20:48.16:765,48,0	0/0:20,0:20:60.20:0,60,839	0/0:30,0:30:87.29:0,87,1216	0/0:24,0:24:66.18:0,66,901	0/0:9,0:9:27.09:0,27,378	0/0:11,0:11:30.09:0,30,403	0/0:30,0:30:90.30:0,90,1255	0/0:22,0:22:66.20:0,66,904	0/0:19,0:19:57.19:0,57,792	0/0:20,0:20:60.16:0,60,791	0/0:22,0:22:63.21:0,63,880	1/1:0,24:24:69.24:1103,69,0	0/0:28,0:28:84.27:0,84,1158	0/0:26,0:26:75.25:0,75,1049	0/0:9,0:9:27.09:0,27,377
chr10	54037921	.	AC	A	2901.80	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=10.755;DP=632;FS=1.889;HRun=5;HaplotypeScore=61.0965;InbreedingCoeff=0.9998;MQ=84.15;MQ0=0;MQRankSum=-0.463;QD=29.92;ReadPosRankSum=2.599;VQSLOD=4.3673;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:69.21:0,69,918	0/0:12,0:12:36.12:0,36,492	0/0:23,0:23:60.06:0,60,786	0/0:17,0:17:37.69:0,38,524	1/1:0,25:25:72.20:816,72,0	0/0:21,0:21:57.19:0,57,778	0/0:17,0:17:48.16:0,48,656	0/0:34,0:34:96.31:0,96,1298	1/1:0,23:23:63.18:715,63,0	0/0:30,0:30:90.28:0,90,1203	0/0:21,0:21:54.17:0,54,722	0/0:21,0:21:60.19:0,60,805	0/0:17,0:17:51.17:0,51,696	1/1:0,19:19:51.15:578,51,0	0/0:24,0:24:63.20:0,63,845	0/0:21,0:21:60.20:0,60,810	0/0:18,0:18:54.18:0,54,738	0/0:18,0:18:54.16:0,54,718	0/0:32,0:32:87.29:0,87,1187	0/0:36,0:36:99:0,102,1393	0/0:19,0:19:51.15:0,51,677	0/0:20,0:20:57.19:0,57,778	0/0:21,0:21:60.20:0,60,820	0/0:15,0:15:39.13:0,39,533	1/1:2,28:30:84.24:953,84,0	0/0:31,0:31:93.31:0,93,1270	0/0:32,0:31:93.28:0,93,1253	0/0:10,0:10:30.10:0,30,410
chr10	54039146	.	A	AGTGT	4599.17	PASS	AB=1.000;AC=16;AF=0.286;AN=56;BaseQRankSum=-4.184;DP=619;FS=5.587;HRun=0;HaplotypeScore=146.3837;InbreedingCoeff=0.7639;MQ=69.89;MQ0=0;MQRankSum=-1.424;QD=21.59;ReadPosRankSum=0.599;VQSLOD=4.5169;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:34,0:34:11.24:11,0,127	0/0:7,0:7:12.45:0,12,47	0/0:21,0:20:13.06:0,13,426	0/0:21,0:19:29.91:0,30,439	1/1:18,0:19:13.64:403,14,0	0/0:20,0:20:12.36:0,12,100	0/0:27,0:27:29.59:0,30,177	1/1:18,1:19:18.42:205,18,0	1/1:31,0:31:60.14:708,60,0	0/0:22,0:22:31.46:0,31,161	0/0:14,0:14:26.32:0,26,102	0/0:25,0:25:60.16:0,60,924	0/0:22,0:22:51.17:0,51,861	1/1:25,0:25:54.10:632,54,0	0/0:25,0:25:3.25:0,3,153	0/0:22,0:22:48.21:0,48,191	1/1:24,5:31:63.22:1521,63,0	1/1:12,0:12:24.08:521,24,0	0/1:17,0:17:17.88:18,0,60	0/0:16,0:16:9.63:0,10,79	0/0:53,0:53:84.01:0,84,381	0/0:18,0:18:24.06:0,24,359	0/0:10,0:10:21.07:0,21,348	0/0:41,0:41:99:0,99,1633	1/1:25,0:25:48.12:581,48,0	0/0:15,0:15:25.20:0,25,91	0/0:21,0:21:13.31:0,13,139	0/0:6,0:6:7.58:0,8,28
chr10	54039156	.	T	TGTG	4991.13	PASS	AB=1.000;AC=41;AF=0.732;AN=56;BaseQRankSum=9.396;DP=633;FS=1.645;HRun=0;HaplotypeScore=134.4175;InbreedingCoeff=0.7274;MQ=66.86;MQ0=4;MQRankSum=-3.263;QD=10.33;ReadPosRankSum=3.756;VQSLOD=4.7336;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:34,0:34:51.13:203,51,0	1/1:7,0:7:15.78:66,16,0	0/0:15,0:14:37.78:0,38,368	0/1:20,0:18:8.60:9,0,338	0/1:21,0:21:7.29:230,0,7	1/1:19,0:20:34.52:128,35,0	1/1:26,0:26:11.78:134,12,0	1/1:5,15:23:17.42:422,17,0	1/1:26,0:26:45.01:407,45,0	1/1:23,0:23:47.55:198,48,0	1/1:16,0:16:25.96:99,26,0	0/0:35,0:37:66.93:0,67,1023	0/0:27,0:27:57.04:0,57,834	1/1:22,0:22:16.49:347,16,0	1/1:23,0:23:39.32:226,39,0	1/1:21,0:21:46.73:179,47,0	1/1:31,0:31:40.25:710,40,0	0/1:16,0:16:10.68:222,0,11	1/1:15,0:15:37.07:196,37,0	1/1:15,0:15:32.29:164,32,0	1/1:53,0:53:81.75:379,82,0	0/0:18,0:18:29.99:0,30,405	0/0:13,0:14:27.02:0,27,396	0/0:36,0:39:99:0,105,1661	1/1:24,0:24:17.69:327,18,0	1/1:14,0:13:32.26:151,32,0	1/1:22,0:22:10.07:166,10,0	1/1:7,0:7:7.79:30,8,0
chr10	54039157	.	G	GT	11121.88	PASS	AB=1.000;AC=41;AF=0.732;AN=56;BaseQRankSum=-6.774;DP=632;FS=12.622;HRun=1;HaplotypeScore=92.3225;InbreedingCoeff=0.8770;MQ=67.07;MQ0=4;MQRankSum=-2.841;QD=23.92;ReadPosRankSum=6.240;VQSLOD=3.5380;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,33:35:60.18:818,60,0	1/1:1,6:7:17.65:218,18,0	0/0:15,0:14:38.89:0,39,383	0/0:20,0:18:10.18:0,10,317	1/1:10,12:23:24.75:283,25,0	1/1:1,18:19:42.12:565,42,0	1/1:1,26:27:38.79:657,39,0	0/1:20,0:20:61.64:167,0,62	1/1:4,22:26:55.27:508,55,0	1/1:3,22:24:60.16:771,60,0	1/1:2,15:17:8.79:394,9,0	0/0:38,0:38:53.30:0,53,1056	0/0:26,0:26:68.85:0,69,786	1/1:7,14:23:32.95:423,33,0	1/1:7,16:22:55.57:740,56,0	1/1:0,20:20:54.18:753,54,0	1/1:7,20:27:48.65:525,49,0	1/1:9,6:15:16.18:198,16,0	1/1:1,15:16:41.92:498,42,0	1/1:2,14:16:35.99:451,36,0	1/1:6,50:56:99:1523,109,0	0/0:14,0:14:39.07:0,39,444	0/0:15,0:15:32.81:0,33,377	0/0:39,0:39:99:0,111,1388	1/1:7,15:23:35.65:431,36,0	1/1:2,14:15:38.96:462,39,0	1/1:3,22:24:36.23:611,36,0	1/1:0,5:5:9.03:125,9,0
chr10	54039158	.	G	GT	1534.64	PASS	AB=0.790;AC=11;AF=0.196;AN=56;BaseQRankSum=10.972;DP=626;FS=4.403;HRun=0;HaplotypeScore=122.5170;InbreedingCoeff=0.6324;MQ=66.99;MQ0=4;MQRankSum=-1.964;QD=10.58;ReadPosRankSum=4.743;VQSLOD=3.8154;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:40.72:0,41,147	0/1:7,0:7:7.12:7,0,17	0/0:16,0:15:39.05:0,39,428	0/0:19,0:17:9.84:0,10,359	0/1:11,12:23:26.30:151,0,26	0/0:19,0:19:32.86:0,33,127	0/0:28,0:27:39.46:0,39,146	0/0:19,0:19:38.44:0,38,256	1/1:7,19:26:45.59:397,46,0	0/0:26,0:25:37.75:0,38,221	0/0:17,0:17:30.13:0,30,139	0/0:37,0:37:99:0,105,1187	0/0:26,0:26:78.10:0,78,899	1/1:10,14:24:11.40:308,11,0	0/0:22,0:21:44.27:0,44,167	0/0:20,0:20:42.34:0,42,151	1/1:7,0:27:27.02:420,27,0	0/1:9,0:15:16.12:128,0,16	0/0:16,0:16:37.74:0,38,172	0/0:16,0:16:28.89:0,29,123	0/0:55,0:55:73.86:0,74,337	0/0:16,0:16:42.08:0,42,477	0/0:15,0:15:36.04:0,36,429	0/0:39,0:39:99:0,111,1405	1/1:8,15:23:9.42:289,9,0	0/0:16,0:15:38.39:0,38,185	0/0:24,0:23:27.81:0,28,119	0/0:5,0:5:6.56:0,7,21
chr10	54039569	.	A	ACCAAGT	1631.48	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-3.462;DP=676;FS=0.000;HRun=0;HaplotypeScore=134.8120;InbreedingCoeff=0.9839;MQ=82.41;MQ0=0;MQRankSum=-3.384;QD=60.43;ReadPosRankSum=-5.430;VQSLOD=2.5961;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,120,2619	0/0:11,0:11:33.10:0,33,704	0/0:18,0:18:48.13:0,48,859	0/0:22,0:22:45.12:0,45,883	0/0:26,0:26:72.25:0,72,1601	0/0:25,0:25:66.21:0,66,1451	0/0:17,0:17:42.13:0,42,900	1/1:11,12:27:66.18:1726,66,0	0/0:18,0:18:51.18:0,51,1146	0/0:31,0:31:90.30:0,90,1975	0/0:21,0:21:60.21:0,60,1348	0/0:23,0:23:63.20:0,63,1359	0/0:19,0:19:54.15:0,54,1134	0/0:34,0:34:93.32:0,93,2092	0/0:27,0:27:75.24:0,75,1655	0/0:26,0:26:72.25:0,72,1630	0/0:29,0:28:84.27:0,84,1848	0/0:11,0:11:33.11:0,33,747	0/0:17,0:17:48.16:0,48,1027	0/0:27,0:27:72.24:0,72,1575	0/0:42,0:42:99:0,117,2413	0/0:17,0:17:45.15:0,45,1018	0/0:24,0:24:72.25:0,72,1621	0/0:27,0:27:71.83:0,72,1684	0/0:30,0:30:72.23:0,72,1577	0/0:32,0:32:93.31:0,93,2065	0/0:25,0:25:66.21:0,66,1450	0/0:5,0:5:15.05:0,15,339
chr10	54041964	.	TTGAA	T	131.18	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-0.811;DP=577;FS=9.333;HRun=0;HaplotypeScore=161.0539;InbreedingCoeff=0.8602;MQ=71.30;MQ0=0;MQRankSum=-2.026;QD=18.74;ReadPosRankSum=-4.314;VQSLOD=1.8094;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:75.24:0,75,1512	0/0:13,0:13:14.14:0,14,715	0/0:17,0:17:22.04:0,22,1132	0/0:9,0:9:24.08:0,24,650	0/0:29,0:29:87.30:0,87,1772	0/0:29,0:29:85.84:0,86,1711	0/0:19,0:19:57.20:0,57,1160	0/0:39,0:39:75.76:0,76,2060	0/0:26,0:26:54.26:0,54,1456	0/0:30,0:30:90.31:0,90,1866	0/0:25,0:25:19.19:0,19,1127	0/0:16,0:16:48.16:0,48,1378	0/0:18,0:18:54.19:0,54,1560	0/0:14,0:14:42.14:0,42,846	0/0:19,0:19:51.18:0,51,1044	0/0:22,0:22:39.22:0,39,1194	1/1:2,1:3:5.99:66,6,0	1/1:0,4:4:12.04:171,12,0	0/0:16,0:16:45.15:0,45,885	0/0:22,0:22:66.18:0,66,1270	0/0:29,0:29:84.20:0,84,1675	0/0:23,0:23:69.24:0,69,1999	0/0:33,0:33:99:0,99,2808	0/0:22,0:22:63.22:0,63,1800	0/0:13,0:13:39.13:0,39,797	0/0:27,0:27:78.27:0,78,1588	0/0:33,0:33:74.30:0,74,1955	0/0:2,0:2:6.02:0,6,130
chr10	54041969	.	CACCAGGG	C	160.02	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=3.740;DP=573;FS=1.800;HRun=0;HaplotypeScore=200.6052;InbreedingCoeff=0.8544;MQ=73.88;MQ0=0;MQRankSum=-2.642;QD=32.00;ReadPosRankSum=-1.039;VQSLOD=3.3418;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:66.19:0,66,2455	0/0:14,0:14:42.12:0,42,1518	0/0:16,0:16:38.12:0,38,1255	0/0:11,0:11:33.10:0,33,1158	0/0:29,0:29:87.28:0,87,3387	0/0:27,0:27:81.25:0,81,3074	0/0:18,0:18:54.10:0,54,1907	0/0:34,0:34:99:0,102,3763	0/0:25,0:25:75.24:0,75,2988	0/0:30,0:30:90.28:0,90,3559	0/0:24,0:24:57.20:0,57,2381	0/0:19,0:19:57.20:0,57,2259	0/0:18,0:18:54.19:0,54,2131	0/0:14,0:14:42.13:0,42,1658	0/0:20,0:20:54.17:0,54,2161	0/0:20,0:20:57.07:0,57,2279	1/1:0,1:1:3.01:65,3,0	1/1:0,4:4:9.50:196,10,0	0/0:18,0:18:48.11:0,48,1707	0/0:21,0:21:63.22:0,63,2632	0/0:33,0:33:99:0,99,3598	0/0:25,0:25:75.24:0,75,3021	0/0:32,0:32:96.33:0,96,3986	0/0:22,0:22:63.18:0,63,2393	0/0:14,0:14:42.14:0,42,1688	0/0:27,0:27:78.26:0,78,3172	0/0:31,0:31:93.30:0,93,3679	0/0:4,0:4:12.04:0,12,423
chr10	54041981	.	T	TG	2065.42	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=5.278;DP=587;FS=3.393;HRun=1;HaplotypeScore=143.0235;InbreedingCoeff=0.9425;MQ=76.90;MQ0=0;MQRankSum=-0.468;QD=37.55;ReadPosRankSum=1.534;VQSLOD=3.2969;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:60.19:0,60,777	1/1:0,16:16:48.16:716,48,0	0/0:17,0:17:42.03:0,42,525	0/0:14,0:14:30.70:0,31,455	0/0:29,0:29:81.23:0,81,1034	0/0:25,0:25:60.19:0,60,779	0/0:16,0:16:45.15:0,45,584	0/0:32,0:32:87.24:0,87,1111	0/0:28,0:28:84.27:0,84,1090	0/0:30,0:30:84.27:0,84,1087	0/0:28,0:28:57.17:0,57,726	0/0:21,0:21:63.20:0,63,818	0/0:17,0:17:48.16:0,48,623	0/0:16,0:16:45.15:0,45,584	1/1:1,19:20:51.17:765,51,0	1/1:1,18:19:15.21:725,15,0	0/0:4,0:4:6.02:0,6,77	0/0:6,0:5:15.01:0,15,175	0/0:17,0:17:48.12:0,48,605	0/0:22,0:22:60.20:0,60,779	0/0:27,0:27:78.25:0,78,1012	0/0:27,0:27:81.25:0,81,1038	0/0:30,0:30:87.28:0,87,1127	0/0:26,0:26:75.24:0,75,974	0/0:13,0:13:39.13:0,39,506	0/0:28,0:28:81.22:0,81,1032	0/0:29,0:29:84.27:0,84,1089	0/0:4,0:4:12.04:0,12,156
chr10	54042049	.	AAAGT	A	6354.52	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=15.838;DP=539;FS=11.694;HRun=0;HaplotypeScore=198.2745;InbreedingCoeff=0.9660;MQ=82.19;MQ0=0;MQRankSum=-16.463;QD=32.09;ReadPosRankSum=0.149;VQSLOD=3.5832;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,15:20:39.98:555,40,0	0/0:22,0:22:66.21:0,66,1814	0/0:19,0:19:56.96:0,57,1498	0/0:21,0:20:54.12:0,54,1366	0/0:40,0:40:99:0,117,3244	1/1:3,18:21:63.13:884,63,0	1/1:7,11:18:41.12:532,41,0	1/1:0,23:23:68.84:851,69,0	0/0:28,0:28:81.26:0,81,2227	1/1:0,14:14:33:462,33,0	1/1:5,18:23:39.08:540,39,0	0/0:22,0:22:66.23:0,66,1913	0/0:17,0:17:51.18:0,51,1466	0/0:15,0:15:45.15:0,45,1291	0/0:26,0:26:78.27:0,78,2245	0/0:19,0:19:57.14:0,57,1522	1/1:2,5:7:12.04:178,12,0	1/1:1,2:3:6.02:95,6,0	1/1:0,11:11:27:353,27,0	1/1:5,11:16:40.62:546,41,0	1/1:5,6:11:18.67:218,19,0	0/0:32,0:32:96.33:0,96,2709	0/0:28,0:28:81.26:0,81,2278	0/0:35,0:35:99:0,105,2999	0/0:17,0:17:48.16:0,48,1366	1/1:5,12:17:45.02:621,45,0	1/1:3,9:12:30.05:427,30,0	1/1:0,2:2:6.02:92,6,0
chr10	54042054	.	CAGGTTATG	C	8761.92	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=16.747;DP=501;FS=9.986;HRun=0;HaplotypeScore=217.5700;InbreedingCoeff=0.9646;MQ=85.10;MQ0=0;MQRankSum=-16.382;QD=55.46;ReadPosRankSum=2.412;VQSLOD=3.7869;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,15:15:42.13:865,42,0	0/0:21,0:21:63.20:0,63,2138	0/0:19,0:19:51.17:0,51,1948	0/0:21,0:20:57.18:0,57,2037	0/0:39,0:39:99:0,108,3789	1/1:0,18:18:54.19:1215,54,0	1/1:0,11:11:33.11:704,33,0	1/1:9,14:23:42.14:979,42,0	0/0:27,0:27:78.27:0,78,2669	1/1:5,9:14:27.09:624,27,0	1/1:0,18:18:45.12:877,45,0	0/0:25,0:25:72.25:0,72,3143	0/0:18,0:18:48.16:0,48,2034	0/0:15,0:15:45.15:0,45,1493	0/0:26,0:26:78.24:0,78,2644	0/0:18,0:18:51.18:0,51,1834	1/1:0,5:5:12.04:267,12,0	1/1:0,2:2:6.02:139,6,0	1/1:4,7:11:18.06:422,18,0	1/1:0,12:12:36.11:774,36,0	1/1:0,6:6:18.04:325,18,0	0/0:33,0:33:99:0,99,4185	0/0:28,0:28:81.26:0,81,3296	0/0:36,0:36:99:0,108,4752	0/0:17,0:17:51.18:0,51,1674	1/1:0,12:12:36.12:827,36,0	1/1:0,9:9:27.09:608,27,0	1/1:0,2:2:6.02:136,6,0
chr10	54042142	.	AT	A	17569.68	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=15.157;DP=690;FS=0.668;HRun=3;HaplotypeScore=138.5897;InbreedingCoeff=0.9992;MQ=77.54;MQ0=1;MQRankSum=-6.346;QD=34.32;ReadPosRankSum=2.391;VQSLOD=3.7667;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,43:45:99:1546,126,0	1/1:0,11:11:33.10:409,33,0	0/0:23,0:23:50.59:0,51,767	0/0:26,0:25:63.67:0,64,889	1/1:2,23:25:69.22:853,69,0	1/1:2,23:25:69.22:855,69,0	1/1:0,30:30:75.24:929,75,0	1/1:3,23:26:69.21:844,69,0	1/1:0,27:27:78.24:963,78,0	1/1:1,31:32:90.28:1114,90,0	1/1:1,20:21:54.17:669,54,0	0/0:20,0:20:60.19:0,60,846	0/0:16,0:16:48.16:0,48,691	1/1:0,25:25:75.24:929,75,0	1/1:1,20:21:60.19:744,60,0	1/1:3,25:28:75.20:913,75,0	1/1:0,23:23:66.21:812,66,0	1/1:1,16:17:45.14:553,45,0	1/1:1,16:17:48.15:594,48,0	1/1:1,31:32:84.26:1033,84,0	1/1:0,23:23:69.22:851,69,0	0/0:31,0:31:93.31:0,93,1328	0/0:25,0:25:75.25:0,75,1080	0/0:37,0:37:99:0,108,1555	1/1:1,19:20:57.18:707,57,0	1/1:0,20:20:60.17:730,60,0	1/1:0,36:36:99:1263,102,0	1/1:0,8:8:21.07:260,21,0
chr10	54042220	.	GTCA	G	13046.66	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=19.652;DP=668;FS=3.008;HRun=0;HaplotypeScore=198.1774;InbreedingCoeff=0.9953;MQ=73.99;MQ0=1;MQRankSum=-18.895;QD=36.04;ReadPosRankSum=0.563;VQSLOD=5.4235;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,23:32:60.14:924,60,0	1/1:1,11:12:30.10:490,30,0	0/0:29,0:28:84.25:0,84,1701	0/0:42,0:42:74.37:0,74,2033	0/0:25,0:25:69.24:0,69,1542	1/1:0,11:11:27.09:430,27,0	1/1:2,16:18:48.12:780,48,0	1/1:4,35:38:99:1607,107,0	0/0:24,0:24:66.18:0,66,1363	1/1:5,16:21:56.90:859,57,0	1/1:2,13:15:36.06:525,36,0	0/0:33,0:33:96.33:0,96,2182	0/0:25,0:25:75.23:0,75,1616	0/0:27,0:27:78.27:0,78,1753	1/1:4,25:29:72.19:1113,72,0	1/1:4,21:25:63.18:962,63,0	1/1:8,14:22:42.07:651,42,0	1/1:4,12:16:41.77:583,42,0	1/1:5,8:13:29.73:429,30,0	1/1:4,19:23:51.13:814,51,0	1/1:6,20:26:39.49:567,39,0	0/0:18,0:18:48.14:0,48,993	0/0:26,0:26:75.20:0,75,1611	0/0:39,0:39:99:0,114,2503	0/0:17,0:17:51.18:0,51,1176	1/1:6,13:19:41.93:666,42,0	1/1:4,33:37:90.20:1449,90,0	1/1:1,3:4:12.04:196,12,0
chr10	54042236	.	C	CG	14156.80	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=19.304;DP=674;FS=3.955;HRun=0;HaplotypeScore=176.3878;InbreedingCoeff=0.9993;MQ=76.52;MQ0=1;MQRankSum=-16.588;QD=36.87;ReadPosRankSum=-1.701;VQSLOD=3.7454;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,31:33:68.89:1064,69,0	1/1:1,10:11:30.10:469,30,0	0/0:24,0:24:69.03:0,69,861	0/0:33,0:32:83.69:0,84,1077	0/0:29,0:29:87.29:0,87,1211	1/1:0,16:16:36.12:568,36,0	1/1:1,16:17:42.14:655,42,0	1/1:4,38:41:99:1632,108,0	0/0:23,0:23:69.20:0,69,930	1/1:1,17:18:54.10:813,54,0	1/1:1,15:16:42.14:655,42,0	0/0:34,0:34:99:0,102,1411	0/0:19,0:19:57.19:0,57,797	0/0:29,0:29:87.27:0,87,1184	1/1:3,28:31:75.25:1165,75,0	1/1:2,24:26:69.23:1073,69,0	1/1:3,24:27:45.13:684,45,0	1/1:1,18:19:45.15:711,45,0	1/1:1,14:15:44.51:651,45,0	1/1:0,20:20:54.18:850,54,0	1/1:3,26:29:38.87:575,39,0	0/0:17,0:17:51.17:0,51,712	0/0:26,0:26:75.24:0,75,1030	0/0:37,0:37:99:0,105,1434	0/0:19,0:19:57.14:0,57,773	1/1:4,17:21:57.19:859,57,0	1/1:3,33:36:90.31:1400,90,0	1/1:0,7:7:21.07:331,21,0
chr10	54042792	.	CT	C	2965.31	PASS	AB=0.941;AC=43;AF=0.768;AN=56;BaseQRankSum=7.934;DP=360;FS=25.114;HRun=13;HaplotypeScore=73.3954;InbreedingCoeff=0.7370;MQ=71.83;MQ0=0;MQRankSum=0.311;QD=10.98;ReadPosRankSum=2.812;VQSLOD=1.2857;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,17:24:43.69:306,44,0	1/1:0,0:7:14.26:41,14,0	0/1:14,0:14:15.45:15,0,38	0/0:11,0:8:2.90:0,3,16	1/1:3,15:18:25:264,25,0	1/1:3,8:11:23.13:174,23,0	1/1:3,8:11:17.88:131,18,0	1/1:5,11:18:31.30:219,31,0	1/1:3,8:12:25.88:181,26,0	1/1:5,6:11:14.82:105,15,0	1/1:1,6:7:17.87:131,18,0	0/0:18,2:20:26.12:0,26,402	0/0:13,0:13:26.96:0,27,244	1/1:2,8:11:16.92:115,17,0	1/1:2,0:12:16.29:47,16,0	1/1:1,0:3:2.04:6,2,0	1/1:2,0:11:18.89:57,19,0	1/1:3,0:8:8.14:23,8,0	1/1:4,11:15:29.79:218,30,0	1/1:2,11:13:0.58:164,1,0	1/1:3,6:9:17.88:131,18,0	0/0:15,1:17:13.26:0,13,302	0/0:12,1:14:4.88:0,5,178	0/0:13,0:15:29.57:0,30,286	1/1:3,15:18:38.72:284,39,0	1/1:3,8:11:23.84:173,24,0	1/1:1,12:14:31.78:219,32,0	1/1:2,7:10:19.92:137,20,0
chr10	54044544	.	T	TC	1133.83	PASS	AC=20;AF=0.385;AN=52;BaseQRankSum=-1.392;DP=146;FS=0.000;HRun=6;HaplotypeScore=23.0396;InbreedingCoeff=0.7904;MQ=54.77;MQ0=1;MQRankSum=-0.519;QD=24.12;ReadPosRankSum=-0.759;VQSLOD=1.5987;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,5:6:12.04:151,12,0	./.	0/0:3,0:3:9.02:0,9,92	0/0:11,0:9:20.21:0,20,229	0/0:4,0:4:9.02:0,9,92	1/1:1,3:4:6.02:75,6,0	1/1:1,8:9:21.07:264,21,0	0/0:10,0:10:24.02:0,24,234	0/0:7,0:7:15.03:0,15,153	1/1:0,4:4:12.04:151,12,0	1/1:3,2:5:11.98:120,12,0	0/0:6,0:6:12.02:0,12,122	0/0:6,0:6:18.04:0,18,183	0/0:8,0:8:18.04:0,18,182	0/0:2,0:2:3.01:0,3,31	0/0:2,0:2:3.01:0,3,30	0/0:9,0:9:21.01:0,21,205	0/0:9,0:9:21.04:0,21,214	1/1:0,5:5:15.05:189,15,0	1/1:1,2:3:6.02:75,6,0	1/1:0,4:4:9.03:113,9,0	0/0:6,0:6:9.02:0,9,92	0/0:5,0:5:6.01:0,6,61	0/0:4,0:4:9.02:0,9,92	0/0:7,0:7:18.04:0,18,183	./.	1/1:2,4:5:12.04:147,12,0	1/1:0,1:1:3.01:38,3,0
chr10	54044713	.	GGTTGGTTGGCACT	G	14029.83	PASS	AB=0.571;AC=30;AF=0.536;AN=56;BaseQRankSum=12.674;DP=386;FS=17.043;HRun=0;HaplotypeScore=150.5187;InbreedingCoeff=0.8043;MQ=41.74;MQ0=11;MQRankSum=-12.178;QD=74.23;ReadPosRankSum=2.298;VQSLOD=3.7594;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:10,24:34:91.27:2419,0,91	1/1:2,2:4:8.94:255,9,0	0/0:16,0:9:27.09:0,27,1747	0/0:25,0:7:21.04:0,21,1046	0/0:10,0:10:27.07:0,27,1237	0/1:2,8:10:52.66:692,0,53	1/1:2,15:17:36.12:1426,36,0	0/0:30,0:18:45.15:0,45,2440	0/0:14,0:14:42.14:0,42,2429	1/1:3,11:13:33.11:1198,33,0	1/1:0,3:3:6.02:238,6,0	0/0:14,0:14:36.12:0,36,2280	0/0:20,0:20:60.21:0,60,3799	0/0:16,0:16:45.15:0,45,2480	1/1:1,6:7:18.06:667,18,0	1/1:2,10:12:30.10:1188,30,0	1/1:9,10:19:18.02:614,18,0	1/1:6,15:21:39.09:1443,39,0	1/1:4,8:11:24.08:900,24,0	1/1:0,10:10:27.09:1033,27,0	1/1:5,2:7:5.49:175,5,0	0/0:12,0:12:30.10:0,30,1921	0/0:9,0:9:27.09:0,27,1649	0/0:23,0:23:63.22:0,63,3905	0/0:8,0:8:24.08:0,24,1373	1/1:0,7:7:18.06:713,18,0	1/1:1,8:9:17.69:713,18,0	1/1:0,3:3:9.03:357,9,0
chr10	54044942	.	G	GCCT	21522.70	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-13.816;DP=604;FS=10.283;HRun=0;HaplotypeScore=78.7861;InbreedingCoeff=0.9986;MQ=89.03;MQ0=1;MQRankSum=-8.652;QD=56.64;ReadPosRankSum=1.293;VQSLOD=6.6489;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,36:40:86.70:1986,87,0	1/1:0,7:7:18.06:425,18,0	0/0:31,0:31:93.28:0,93,1506	0/0:20,0:19:54.18:0,54,907	0/0:13,0:13:39.12:0,39,645	1/1:2,18:22:51.18:1188,51,0	1/1:2,20:22:60.21:1416,60,0	1/1:5,32:38:99:2370,108,0	0/0:21,0:21:63.22:0,63,1112	1/1:0,23:24:60.19:1271,60,0	1/1:5,12:17:27.09:611,27,0	0/0:22,0:22:66.21:0,66,1136	0/0:25,0:25:75.26:0,75,1297	0/0:17,0:17:48.16:0,48,817	1/1:3,12:16:40.38:905,40,0	1/1:0,22:22:60.21:1417,60,0	1/1:2,13:15:39.13:904,39,0	1/1:2,11:13:39.13:902,39,0	1/1:2,15:17:48.16:1081,48,0	1/1:2,19:24:48.16:1105,48,0	1/1:0,39:42:96.33:2267,96,0	0/0:20,0:20:60.21:0,60,1051	0/0:11,0:11:33.11:0,33,567	0/0:25,0:24:75.20:0,75,1247	0/0:19,0:19:57.19:0,57,990	1/1:3,23:27:75.26:1717,75,0	1/1:0,21:22:54.19:1270,54,0	1/1:0,9:10:30.10:686,30,0
chr10	54045278	.	C	CTTTA	26444.70	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-11.464;DP=661;FS=1.332;HRun=0;HaplotypeScore=90.6690;InbreedingCoeff=0.9996;MQ=80.42;MQ0=0;MQRankSum=-8.813;QD=66.44;ReadPosRankSum=-0.007;VQSLOD=6.6641;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,22:30:66.18:1570,66,0	1/1:0,8:10:27.05:691,27,0	0/0:19,0:19:45.13:0,45,842	0/0:19,0:19:57.16:0,57,1036	0/0:21,0:21:57.18:0,57,1102	1/1:6,19:29:69.19:1637,69,0	1/1:2,15:18:48.16:1203,48,0	1/1:7,27:37:99:2692,105,0	0/0:28,0:28:75.24:0,75,1461	1/1:0,27:28:84.28:2261,84,0	1/1:1,18:19:57.19:1451,57,0	0/0:23,0:23:60.19:0,60,1159	0/0:29,0:29:84.27:0,84,1618	0/0:20,0:20:57.20:0,57,1116	1/1:6,19:26:66.22:1615,66,0	1/1:2,11:15:33.11:876,33,0	1/1:4,27:34:78.01:2136,78,0	1/1:2,13:16:36.12:957,36,0	1/1:8,11:20:54.19:1407,54,0	1/1:4,21:26:72.25:1905,72,0	1/1:1,11:15:27.09:708,27,0	0/0:30,0:30:87.30:0,87,1716	0/0:26,0:26:75.24:0,75,1451	0/0:24,0:24:72.23:0,72,1391	0/0:24,0:24:72.19:0,72,1363	1/1:2,27:28:81.28:2262,81,0	1/1:1,29:33:78.27:2150,78,0	1/1:0,12:13:33.11:923,33,0
chr10	54046336	.	G	GT	10455.75	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=6.433;DP=546;FS=6.888;HRun=4;HaplotypeScore=99.9223;InbreedingCoeff=0.9902;MQ=65.18;MQ0=7;MQRankSum=-1.508;QD=35.20;ReadPosRankSum=-0.114;VQSLOD=4.2936;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,30:32:81.23:1170,81,0	1/1:0,8:7:18.02:245,18,0	0/0:45,0:23:57.57:0,58,717	0/0:49,0:32:84.19:0,84,1020	0/0:14,0:13:29.89:0,30,387	1/1:1,16:17:47.99:613,48,0	1/1:3,20:22:47.99:611,48,0	1/1:2,25:27:81.21:1147,81,0	0/0:13,0:13:14.96:0,15,194	1/1:0,14:13:39.13:585,39,0	1/1:0,15:15:30.06:419,30,0	0/0:21,0:21:48.14:0,48,608	0/0:18,0:18:32.79:0,33,428	0/0:13,0:13:27.07:0,27,335	1/1:1,16:17:42.14:630,42,0	1/1:1,15:16:39.13:576,39,0	1/1:2,17:19:48.59:695,49,0	1/1:2,13:15:42.11:605,42,0	1/1:1,8:9:27.07:368,27,0	1/1:3,16:16:33.03:445,33,0	1/1:3,22:25:56.80:650,57,0	0/0:12,0:12:17.80:0,18,220	0/0:17,0:16:45.15:0,45,582	0/0:30,0:30:78.25:0,78,996	0/0:16,0:16:27.04:0,27,350	1/1:0,14:14:42.14:622,42,0	1/1:0,22:22:63.14:895,63,0	1/1:0,5:5:12.04:180,12,0
chr10	54046344	.	T	TCA	2088.65	PASS	AB=0.840;AC=39;AF=0.813;AN=48;BaseQRankSum=-0.052;DP=614;FS=3.271;HRun=0;HaplotypeScore=173.3496;InbreedingCoeff=0.2529;MQ=59.09;MQ0=10;MQRankSum=-0.543;QD=4.57;ReadPosRankSum=-2.700;VQSLOD=2.9280;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:34:16.70:0,17,78	./.	./.	./.	1/1:21,0:20:5.83:52,6,0	1/1:21,0:21:9.02:111,9,0	1/1:24,0:22:9.02:110,9,0	1/1:27,0:27:10.86:61,11,0	1/1:18,0:18:5.94:44,6,0	1/1:22,0:20:17.76:137,18,0	./.	0/1:14,8:22:40.83:239,0,41	1/1:13,6:20:6.02:83,6,0	1/1:21,0:21:15.47:143,15,0	0/0:16,0:15:15.02:0,15,148	0/1:14,0:17:11.24:11,0,71	1/1:25,0:24:18:193,18,0	1/1:16,0:17:12:116,12,0	1/1:10,0:10:9.47:79,9,0	1/1:19,0:16:5.99:50,6,0	1/1:27,0:27:5.99:50,6,0	1/1:9,3:13:3.01:33,3,0	0/1:13,5:18:50.11:119,0,50	0/1:20,14:33:38:283,0,38	0/1:24,0:24:0:0,0,0	1/1:18,0:18:14.08:98,14,0	1/1:27,0:27:20.63:157,21,0	1/1:10,0:10:8.69:61,9,0
chr10	54046373	.	CA	C	392.25	PASS	AB=0.700;AC=1;AF=0.018;AN=56;BaseQRankSum=1.494;DP=677;FS=16.472;HRun=1;HaplotypeScore=142.0829;InbreedingCoeff=-0.0197;MQ=51.56;MQ0=11;MQRankSum=-0.060;QD=14.01;ReadPosRankSum=-0.471;VQSLOD=1.8288;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:77.02:0,77,860	0/0:10,0:9:18.53:0,19,248	0/0:28,0:13:39.06:0,39,454	0/0:36,0:20:57.44:0,57,689	0/0:18,0:17:15.04:0,15,185	0/0:22,0:22:36.08:0,36,431	0/0:28,0:26:27.23:0,27,368	0/1:16,12:27:99:467,0,269	0/0:27,0:27:42.13:0,42,546	0/0:22,0:19:57.18:0,57,793	0/0:14,0:14:24.05:0,24,276	0/0:30,0:30:66.19:0,66,817	0/0:24,0:24:39.11:0,39,468	0/0:25,0:25:45.14:0,45,579	0/0:24,0:23:63.21:0,63,854	0/0:28,0:28:54.42:0,54,638	0/0:36,0:35:86.51:0,87,1116	0/0:17,0:17:45.14:0,45,593	0/0:19,0:19:54.10:0,54,688	0/0:16,0:14:18.53:0,19,226	0/0:36,0:36:47.43:0,47,607	0/0:20,0:19:27.07:0,27,337	0/0:17,0:16:36.57:0,37,451	0/0:38,0:37:83.93:0,84,1025	0/0:30,0:30:33.10:0,33,419	0/0:19,0:19:57.19:0,57,795	0/0:18,0:18:45.62:0,46,615	0/0:9,0:9:18.06:0,18,234
chr10	54047567	.	G	GAGTCT	5303.86	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-0.609;DP=549;FS=0.508;HRun=0;HaplotypeScore=104.1910;InbreedingCoeff=0.9988;MQ=79.22;MQ0=0;MQRankSum=-8.764;QD=68.88;ReadPosRankSum=1.979;VQSLOD=6.0759;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:66.19:0,66,1404	0/0:9,0:9:24.08:0,24,512	0/0:16,0:16:42.08:0,42,790	0/0:12,0:12:30.09:0,30,520	1/1:5,27:32:66.23:1995,66,0	0/0:19,0:19:57.20:0,57,1206	0/0:17,0:17:51.18:0,51,1083	0/0:30,0:30:84.28:0,84,1731	1/1:4,7:11:30.10:891,30,0	0/0:30,0:30:87.30:0,87,1822	0/0:30,0:30:84.29:0,84,1761	0/0:18,0:18:51.18:0,51,1071	0/0:16,0:16:48.15:0,48,985	1/1:0,11:12:30.10:922,30,0	0/0:18,0:18:54.18:0,54,1096	0/0:21,0:21:63.20:0,63,1304	0/0:14,0:14:42.13:0,42,855	0/0:14,0:14:42.14:0,42,879	0/0:27,0:27:78.25:0,78,1582	0/0:28,0:28:84.27:0,84,1751	0/0:16,0:16:48.16:0,48,1020	0/0:15,0:15:39.13:0,39,796	0/0:26,0:26:75.26:0,75,1598	0/0:13,0:13:36.10:0,36,713	1/1:5,16:22:48.16:1496,48,0	0/0:26,0:26:78.27:0,78,1631	0/0:22,0:22:60.18:0,60,1201	0/0:11,0:11:33.11:0,33,703
chr10	54047725	.	C	CAA	9297.98	PASS	AB=0.929;AC=43;AF=0.768;AN=56;BaseQRankSum=-2.041;DP=533;FS=6.808;HRun=9;HaplotypeScore=79.1761;InbreedingCoeff=0.8536;MQ=79.86;MQ0=1;MQRankSum=-4.394;QD=21.33;ReadPosRankSum=0.373;VQSLOD=3.7088;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:21:28.57:104,29,0	1/1:0,0:5:12.48:43,12,0	0/0:16,0:17:44.75:0,45,426	0/1:12,0:12:30.18:30,0,154	1/1:6,0:26:44.51:407,45,0	1/1:1,18:19:48.16:739,48,0	1/1:1,12:13:30.10:461,30,0	1/1:10,0:30:19.11:155,19,0	1/1:4,1:20:24.01:247,24,0	1/1:7,17:26:47.57:577,48,0	1/1:2,14:18:38.89:460,39,0	0/0:18,0:18:48.09:0,48,508	0/0:18,0:18:36.03:0,36,379	1/1:2,0:17:9.01:86,9,0	1/1:4,0:25:32.94:129,33,0	1/1:4,0:12:12.48:43,12,0	1/1:4,16:23:29.59:421,30,0	1/1:0,10:11:26.58:378,27,0	1/1:4,23:27:69.21:1039,69,0	1/1:3,17:21:51.04:682,51,0	1/1:3,22:26:48.16:722,48,0	0/0:19,0:19:45.03:0,45,467	0/0:14,0:14:20.97:0,21,223	0/0:10,0:11:6.36:0,6,264	1/1:6,1:15:15.02:144,15,0	1/1:2,18:22:54.14:768,54,0	1/1:13,19:34:89.68:1220,90,0	1/1:1,8:11:32.56:444,33,0
chr10	54047953	.	G	GAA	9141.83	PASS	AB=0.611;AC=37;AF=0.661;AN=56;BaseQRankSum=-1.536;DP=539;FS=0.401;HRun=9;HaplotypeScore=78.4472;InbreedingCoeff=0.9179;MQ=81.51;MQ0=1;MQRankSum=-2.761;QD=24.91;ReadPosRankSum=0.167;VQSLOD=4.5075;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,2:22:36.04:338,36,0	1/1:0,0:10:19.96:68,20,0	0/0:24,0:23:32.14:0,32,293	0/0:24,0:21:29.58:0,30,296	1/1:4,1:26:52.26:502,52,0	1/1:1,19:20:42.14:647,42,0	1/1:5,14:19:42.14:647,42,0	1/1:18,0:25:42.05:414,42,0	1/1:7,1:18:30.05:287,30,0	1/1:7,13:23:48.14:666,48,0	1/1:2,14:19:48.07:656,48,0	0/0:19,0:19:48.10:0,48,511	0/0:16,0:16:48.10:0,48,502	0/1:4,0:11:13.90:126,0,14	1/1:1,1:22:47.93:200,48,0	1/1:0,0:12:24.82:85,25,0	0/0:24,0:24:34.06:0,34,570	0/0:12,0:12:26.96:0,27,262	1/1:6,18:23:51.11:696,51,0	1/1:4,20:24:57.03:753,57,0	1/1:1,13:14:33.11:508,33,0	0/0:16,0:16:18.49:0,18,391	0/0:28,0:28:66.06:0,66,678	0/0:9,0:9:27.07:0,27,287	1/1:1,0:16:33.05:315,33,0	1/1:2,18:23:56.68:837,57,0	1/1:5,25:32:80.64:1203,81,0	1/1:1,5:7:14.54:193,15,0
chr10	54048285	.	A	ACTGCGTATTATGCT	47373.07	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=6.872;DP=521;FS=8.969;HRun=0;HaplotypeScore=230.2828;InbreedingCoeff=0.9869;MQ=83.73;MQ0=0;MQRankSum=-16.355;QD=132.70;ReadPosRankSum=-0.947;VQSLOD=3.2082;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,5:19:51.18:2883,51,0	1/1:6,5:14:33.11:1812,33,0	0/0:26,0:26:69.21:0,69,2476	0/0:30,0:28:57.10:0,57,2526	1/1:15,8:23:39.13:2533,39,0	1/1:9,5:16:39.13:1805,39,0	1/1:17,6:22:57.20:3014,57,0	1/1:19,2:23:69.22:3665,69,0	1/1:3,7:12:32.70:2120,33,0	1/1:14,10:27:78.25:4545,78,0	1/1:3,6:11:27.09:1489,27,0	0/0:22,0:22:63.22:0,63,2520	0/0:21,0:21:63.22:0,63,2414	1/1:11,4:16:38.64:2366,39,0	1/1:9,4:15:24.08:1470,24,0	1/1:12,4:16:42.14:2270,42,0	1/1:7,3:11:21.07:1367,21,0	1/1:8,3:13:24.08:1693,24,0	1/1:7,0:7:21.04:932,21,0	1/1:17,4:21:39.13:1668,39,0	1/1:16,10:30:56.88:3007,57,0	0/0:18,0:18:48.16:0,48,1914	0/0:15,0:15:42.14:0,42,1571	0/0:32,0:32:96.29:0,96,3945	1/1:8,8:17:42.14:2846,42,0	1/1:10,7:17:48.16:2969,48,0	1/1:9,9:20:42.14:2619,42,0	1/1:6,0:6:9.03:301,9,0
chr10	54048390	.	G	GA	12841.26	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=13.977;DP=518;FS=7.205;HRun=1;HaplotypeScore=130.9545;InbreedingCoeff=0.9676;MQ=90.40;MQ0=0;MQRankSum=-8.805;QD=36.27;ReadPosRankSum=-0.500;VQSLOD=3.7090;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,21:27:57.17:821,57,0	1/1:1,7:8:21.07:314,21,0	0/0:24,0:24:67.75:0,68,832	0/0:25,0:25:60.16:0,60,727	1/1:5,13:18:36.11:519,36,0	1/1:4,12:16:42.07:581,42,0	1/1:2,21:23:60.16:857,60,0	1/1:2,19:21:57.19:849,57,0	1/1:0,15:15:42.14:629,42,0	1/1:1,12:13:39.13:567,39,0	1/1:5,10:15:42.08:556,42,0	0/0:22,0:22:60.17:0,60,763	0/0:20,0:20:60.19:0,60,777	1/1:4,8:12:27.09:402,27,0	1/1:0,27:27:66.22:987,66,0	1/1:0,12:12:36.12:539,36,0	1/1:4,9:14:39.02:499,39,0	1/1:3,10:13:30.10:449,30,0	1/1:4,11:15:39.10:558,39,0	1/1:3,18:21:48.16:719,48,0	1/1:5,25:30:66.18:937,66,0	0/0:14,0:14:42.14:0,42,545	0/0:18,0:18:51.15:0,51,646	0/0:41,0:41:99:0,123,1590	1/1:2,13:15:36.12:539,36,0	1/1:2,13:15:42.14:623,42,0	1/1:2,19:20:57.19:854,57,0	1/1:1,1:2:3.01:45,3,0
chr10	54048421	.	AC	A	1260.96	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=15.731;DP=465;FS=2.408;HRun=1;HaplotypeScore=166.7834;InbreedingCoeff=0.8562;MQ=102.47;MQ0=1;MQRankSum=-14.024;QD=4.32;ReadPosRankSum=2.331;VQSLOD=0.5148;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:24,1:25:25.04:123,25,0	1/1:5,0:5:8.67:73,9,0	0/0:36,0:36:99:0,105,1614	0/0:31,0:31:64.91:0,65,1265	1/1:17,2:19:5.82:86,6,0	1/1:11,0:11:9.84:24,10,0	1/1:11,0:11:13.17:58,13,0	1/1:8,0:8:11.27:35,11,0	1/1:13,0:13:21.28:84,21,0	1/1:13,0:13:14.08:79,14,0	1/1:10,2:12:12.03:60,12,0	0/0:23,0:23:69.24:0,69,1100	0/0:23,0:23:69.20:0,69,1050	1/1:15,0:14:19.52:91,20,0	1/1:10,0:10:11.24:39,11,0	1/1:10,0:10:14.33:66,14,0	1/1:16,0:16:14.65:84,15,0	1/1:8,0:8:8.38:36,8,0	1/1:11,1:12:14.62:47,15,0	1/1:20,2:22:20.64:124,21,0	1/1:24,1:24:18.45:99,18,0	0/0:15,0:15:42.14:0,42,655	0/0:16,0:16:45.15:0,45,714	0/0:29,0:29:87.30:0,87,1385	1/1:20,1:21:10.23:60,10,0	1/1:20,0:20:32.50:134,32,0	1/1:13,0:12:3.34:46,3,0	1/1:3,0:3:4.36:10,4,0
chr10	54048427	.	T	TAC	11969.60	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=14.263;DP=495;FS=23.348;HRun=0;HaplotypeScore=155.3103;InbreedingCoeff=0.9740;MQ=95.19;MQ0=1;MQRankSum=-15.568;QD=36.38;ReadPosRankSum=1.942;VQSLOD=4.0840;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:9,16:25:54.66:987,55,0	1/1:2,3:5:9.03:164,9,0	0/0:35,0:35:92.47:0,92,1323	0/0:26,0:26:69.23:0,69,974	1/1:6,16:22:29.69:539,30,0	1/1:3,11:14:36.12:650,36,0	1/1:8,8:16:33.11:587,33,0	1/1:7,6:13:30.10:549,30,0	1/1:2,12:14:39.12:681,39,0	1/1:8,7:15:24.08:434,24,0	1/1:3,10:13:24.08:438,24,0	0/0:24,0:24:63.19:0,63,882	0/0:24,0:24:66.17:0,66,887	1/1:7,11:17:42.14:766,42,0	1/1:7,7:14:21.05:352,21,0	1/1:5,8:13:33.09:571,33,0	1/1:4,12:16:30.10:547,30,0	1/1:4,5:9:15.05:274,15,0	1/1:5,9:14:33.07:549,33,0	1/1:7,16:23:51.17:931,51,0	1/1:9,16:26:30.57:548,31,0	0/0:15,0:15:39.10:0,39,522	0/0:14,0:14:36.09:0,36,466	0/0:28,0:28:78.24:0,78,1099	1/1:4,17:21:45.15:822,45,0	1/1:3,17:20:54.15:953,54,0	1/1:6,8:13:27.08:462,27,0	1/1:0,3:3:9.03:164,9,0
chr10	54049228	.	CCAT	C	18800.22	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=6.103;DP=683;FS=4.280;HRun=0;HaplotypeScore=133.8797;InbreedingCoeff=0.9987;MQ=81.57;MQ0=0;MQRankSum=-7.229;QD=45.97;ReadPosRankSum=2.655;VQSLOD=7.0240;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,45:45:99:2121,114,0	1/1:0,10:10:27.06:448,27,0	0/0:20,0:20:60.20:0,60,1362	0/0:22,0:22:62.89:0,63,1348	0/0:27,0:27:81.22:0,81,1686	1/1:0,13:13:36.08:632,36,0	1/1:0,25:25:63.22:1171,63,0	1/1:1,31:32:93.23:1559,93,0	0/0:27,0:27:81.28:0,81,1807	1/1:0,23:23:68.96:1156,69,0	1/1:0,19:19:48.16:894,48,0	0/0:28,0:28:81.28:0,81,1992	0/0:24,0:24:72.25:0,72,1773	0/0:31,0:31:93.29:0,93,2008	1/1:0,17:17:42.06:738,42,0	1/1:0,24:24:63.22:1172,63,0	1/1:0,30:30:63.22:1168,63,0	1/1:1,22:23:41.40:990,41,0	1/1:0,30:30:84.21:1449,84,0	1/1:0,29:29:63.13:1116,63,0	1/1:0,34:34:69.24:1285,69,0	0/0:26,0:26:78.25:0,78,1863	0/0:18,0:18:54.19:0,54,1277	0/0:30,0:30:87.30:0,87,2041	0/0:21,0:21:63.22:0,63,1414	1/1:0,27:27:78.27:1451,78,0	1/1:0,21:21:60.21:1116,60,0	1/1:0,7:7:18.06:334,18,0
chr10	54049336	.	GTTC	G	3962.25	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-4.691;DP=799;FS=1.401;HRun=0;HaplotypeScore=149.1348;InbreedingCoeff=0.9994;MQ=81.61;MQ0=0;MQRankSum=-1.466;QD=38.47;ReadPosRankSum=3.505;VQSLOD=4.8467;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:62,0:62:99:0,184,4012	0/0:17,0:17:48.16:0,48,1072	0/0:25,0:24:58.08:0,58,1230	0/0:30,0:29:81.24:0,81,1614	1/1:1,24:25:66.23:1075,66,0	0/0:21,0:21:57.15:0,57,1207	0/0:37,0:37:99:0,105,2232	0/0:30,0:30:78.25:0,78,1642	1/1:2,28:30:75.26:1224,75,0	0/0:35,0:35:99:0,105,2346	0/0:16,0:16:45.13:0,45,924	0/0:25,0:25:72.23:0,72,1542	0/0:16,0:16:45.15:0,45,1005	1/1:2,22:25:54.18:880,54,0	0/0:21,0:21:60.14:0,60,1290	0/0:25,0:25:75.21:0,75,1551	0/0:52,0:52:99:0,153,3268	0/0:22,0:22:66.20:0,66,1425	0/0:36,0:36:99:0,99,2151	0/0:25,0:25:60.19:0,60,1279	0/0:45,0:45:99:0,126,2572	0/0:25,0:25:66.21:0,66,1432	0/0:25,0:25:75.26:0,75,1655	0/0:20,0:20:60.21:0,60,1340	1/1:2,21:23:48.16:783,48,0	0/0:33,0:33:90.28:0,90,1878	0/0:45,0:45:99:0,135,2997	0/0:8,0:8:24.08:0,24,535
chr10	54049467	.	TACTC	T	17409.51	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=16.403;DP=641;FS=5.034;HRun=0;HaplotypeScore=115.2898;InbreedingCoeff=0.9850;MQ=97.53;MQ0=3;MQRankSum=-11.263;QD=46.93;ReadPosRankSum=5.141;VQSLOD=5.6344;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,29:29:63.15:1158,63,0	1/1:0,15:15:39.09:717,39,0	0/0:39,0:39:99:0,111,2896	0/0:33,0:33:90.30:0,90,2345	0/0:24,0:24:69.24:0,69,1869	1/1:2,18:20:54.19:1046,54,0	1/1:3,26:29:75.19:1401,75,0	1/1:0,18:18:54.17:1013,54,0	0/0:29,0:29:87.30:0,87,2377	1/1:1,20:21:60.21:1161,60,0	1/1:0,16:16:45.43:695,45,0	0/0:20,0:20:60.21:0,60,1642	0/0:18,0:18:54.19:0,54,1478	0/0:22,0:22:66.21:0,66,1646	1/1:0,28:28:72.20:1357,72,0	1/1:1,30:31:87.30:1685,87,0	1/1:2,27:28:69.24:1337,69,0	1/1:3,18:21:39.13:756,39,0	1/1:2,16:18:48.14:867,48,0	1/1:2,20:21:54.19:1025,54,0	1/1:2,23:25:51.09:901,51,0	0/0:23,0:23:69.24:0,69,1860	0/0:19,0:19:51.18:0,51,1392	0/0:22,0:22:66.19:0,66,1570	0/0:21,0:21:63.22:0,63,1693	1/1:2,21:23:60.17:1071,60,0	1/1:0,23:23:57.20:1104,57,0	1/1:0,2:2:6.02:116,6,0
chr10	54050103	.	AT	A	6245.27	PASS	AB=0.921;AC=40;AF=0.714;AN=56;BaseQRankSum=10.764;DP=564;FS=7.467;HRun=11;HaplotypeScore=70.6885;InbreedingCoeff=0.7948;MQ=75.93;MQ0=0;MQRankSum=-0.052;QD=14.80;ReadPosRankSum=1.077;VQSLOD=5.1339;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,32:39:81.91:645,82,0	1/1:1,3:4:8.99:74,9,0	0/1:17,1:17:7.19:7,0,192	0/1:15,2:16:31.25:31,0,98	1/1:4,0:15:14.71:42,15,0	1/1:5,22:27:53.93:443,54,0	1/1:2,33:35:89.88:739,90,0	1/1:6,0:24:37.11:109,37,0	1/1:1,0:15:20.37:59,20,0	1/1:0,19:19:56.94:468,57,0	1/1:3,13:17:6.01:245,6,0	0/0:25,0:25:75.18:0,75,794	0/0:24,0:24:63.14:0,63,663	1/1:2,0:15:27.28:84,27,0	1/1:0,21:21:59.93:493,60,0	1/1:1,18:19:41.95:345,42,0	0/0:25,1:26:47.48:0,47,689	0/0:13,0:13:36.06:0,36,373	1/1:3,12:15:35.93:292,36,0	1/1:2,21:23:62.91:517,63,0	1/1:4,19:23:44.94:369,45,0	0/0:16,0:16:42.06:0,42,428	0/0:14,0:14:21.45:0,21,204	0/0:24,0:24:63.11:0,63,653	1/1:0,0:16:28.52:82,29,0	1/1:2,31:33:92.84:757,93,0	1/1:5,20:25:47.91:394,48,0	1/1:0,2:2:5.99:49,6,0
chr10	54050352	.	CCT	C	710.18	PASS	AB=0.789;AC=7;AF=0.135;AN=52;BaseQRankSum=7.193;DP=358;FS=10.026;HRun=0;HaplotypeScore=38.7132;InbreedingCoeff=0.7814;MQ=50.44;MQ0=30;MQRankSum=0.878;QD=13.66;ReadPosRankSum=2.875;VQSLOD=1.8532;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:66.19:0,66,1129	0/0:7,0:7:12:0,12,219	./.	./.	1/1:0,12:10:18.06:274,18,0	0/0:6,0:5:15.05:0,15,259	0/0:10,0:9:24.07:0,24,408	0/0:18,0:9:26.91:0,27,390	0/1:11,4:11:35.90:165,0,36	0/0:12,0:9:24.06:0,24,398	0/0:14,0:12:24.07:0,24,408	0/0:18,0:18:45.09:0,45,714	0/0:16,0:16:45:0,45,769	1/1:0,11:8:12.04:184,12,0	0/0:17,0:16:42.14:0,42,738	0/0:17,0:16:45.15:0,45,809	0/0:12,0:12:36.08:0,36,610	0/0:6,0:6:18.02:0,18,283	0/0:15,0:7:21.07:0,21,339	0/0:13,0:12:32.92:0,33,489	0/0:14,0:11:27.09:0,27,458	0/0:17,0:16:45.15:0,45,790	0/0:13,0:12:30.10:0,30,530	0/0:14,0:14:42.12:0,42,719	1/1:2,12:12:15.05:229,15,0	0/0:15,0:12:36.10:0,36,579	0/0:16,0:16:44.99:0,45,721	0/0:4,0:3:9.03:0,9,165
chr10	54051578	.	C	CTG	2442.42	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=0.714;DP=715;FS=1.874;HRun=0;HaplotypeScore=83.0179;InbreedingCoeff=0.8638;MQ=54.68;MQ0=10;MQRankSum=-10.174;QD=27.44;ReadPosRankSum=-1.631;VQSLOD=4.4788;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,120,1740	0/0:9,0:9:24.06:0,24,332	0/0:36,0:8:21.07:0,21,304	0/0:40,0:16:46.22:0,46,603	1/1:0,18:18:45.15:839,45,0	0/0:24,0:24:57.14:0,57,796	0/0:16,0:16:33.07:0,33,461	0/0:36,0:33:96.32:0,96,1414	1/1:5,15:12:30.10:560,30,0	0/0:40,0:40:99:0,120,1752	0/0:24,0:24:72.24:0,72,1060	0/0:24,0:24:42.14:0,42,619	0/0:34,0:33:75.25:0,75,1104	1/1:4,14:12:18.06:336,18,0	0/0:26,0:26:53.80:0,54,794	0/0:28,0:28:74.87:0,75,1104	0/0:29,0:28:75.21:0,75,1073	0/0:20,0:19:57.19:0,57,840	0/0:20,0:19:57.19:0,57,840	0/0:40,1:40:99:0,108,1571	0/0:23,0:23:69.22:0,69,997	0/0:22,0:22:63.21:0,63,928	0/0:27,0:27:78.25:0,78,1127	0/0:17,0:17:42.12:0,42,598	1/1:2,18:18:45.15:840,45,0	0/0:31,0:30:87.29:0,87,1280	0/0:17,0:17:45.15:0,45,663	0/1:11,0:11:31.89:32,0,285
chr10	54052133	.	GC	G	2430.66	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.079;DP=630;FS=1.572;HRun=2;HaplotypeScore=59.8896;InbreedingCoeff=0.9916;MQ=59.55;MQ0=1;MQRankSum=1.357;QD=31.98;ReadPosRankSum=-0.735;VQSLOD=3.0933;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,117,1728	0/0:6,0:6:18.06:0,18,270	0/0:19,0:16:45.15:0,45,636	0/0:18,0:14:42.14:0,42,620	0/0:25,0:25:60.20:0,60,898	0/0:26,0:26:66.20:0,66,951	0/0:13,0:13:30.10:0,30,449	1/1:0,33:32:90.28:1156,90,0	0/0:12,0:12:27.09:0,27,404	0/0:23,0:23:63.19:0,63,907	0/0:31,0:31:72.23:0,72,1053	0/0:14,0:13:39.12:0,39,567	0/0:17,0:17:48.16:0,48,719	0/0:23,0:23:57.19:0,57,854	0/0:22,0:22:57.19:0,57,854	0/0:29,0:29:78.25:0,78,1150	1/1:0,28:28:72.23:935,72,0	1/1:2,13:15:16.47:481,16,0	0/0:21,0:18:51.16:0,51,736	0/0:21,0:21:57.18:0,57,833	0/0:31,0:31:90.30:0,90,1349	0/0:23,0:23:57.19:0,57,854	0/0:22,0:21:60.10:0,60,899	0/0:19,0:19:54.18:0,54,809	0/0:17,0:17:36.12:0,36,539	0/0:31,0:31:90.30:0,90,1329	0/0:39,0:39:99:0,105,1530	0/0:8,0:8:24.08:0,24,360
chr10	54052731	.	A	ACTT	10511.05	PASS	AB=0.707;AC=35;AF=0.625;AN=56;BaseQRankSum=-4.980;DP=507;FS=12.058;HRun=0;HaplotypeScore=52.7764;InbreedingCoeff=0.4821;MQ=32.11;MQ0=59;MQRankSum=-8.940;QD=32.14;ReadPosRankSum=3.307;VQSLOD=4.3104;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:13,5:5:9.03:200,9,0	1/1:4,8:11:3.12:447,3,0	0/0:28,0:1:3.01:0,3,41	0/0:29,0:3:6.02:0,6,90	1/1:6,27:25:48.34:1293,48,0	1/1:4,12:13:30.10:668,30,0	0/1:8,6:11:26.99:380,0,27	0/1:15,5:8:22.67:186,0,23	1/1:5,13:13:33.11:735,33,0	1/1:5,21:20:57.15:1224,57,0	1/1:5,5:8:12.04:267,12,0	0/0:24,0:23:36.07:0,36,535	0/0:20,0:18:30.06:0,30,460	1/1:4,5:6:15.02:288,15,0	1/1:6,15:17:42.11:890,42,0	0/1:4,15:15:2.60:650,0,3	0/1:10,4:7:23.82:249,0,24	0/0:5,0:1:2.98:0,3,21	1/1:10,7:8:3.08:447,3,0	1/1:1,12:11:33.07:659,33,0	1/1:10,2:3:6.02:134,6,0	0/0:22,0:22:27.09:0,27,440	0/0:24,0:22:26.97:0,27,409	0/0:28,0:18:18.06:0,18,294	0/1:7,6:9:8.78:188,0,9	1/1:2,11:12:27.09:602,27,0	1/1:5,20:17:42.14:936,42,0	1/1:0,1:1:3.01:67,3,0
chr10	54052965	.	C	CT	1939.92	PASS	AB=0.726;AC=29;AF=0.518;AN=56;BaseQRankSum=2.973;DP=388;FS=10.002;HRun=13;HaplotypeScore=60.9400;InbreedingCoeff=0.5577;MQ=52.81;MQ0=10;MQRankSum=-3.557;QD=7.46;ReadPosRankSum=-0.234;VQSLOD=1.3940;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,1:15:11.36:58,11,0	0/0:0,0:4:4.06:0,4,12	0/0:12,0:8:8.86:0,9,59	0/1:9,0:3:0:0,0,0	1/1:24,0:24:51.80:277,52,0	1/1:3,12:15:12.01:112,12,0	0/1:2,4:6:29.05:44,0,29	1/1:21,6:24:13.33:144,13,0	1/1:17,0:16:34.55:142,35,0	1/1:10,7:16:4.73:178,5,0	1/1:7,6:13:12.01:111,12,0	0/0:16,0:17:34.62:0,35,231	0/0:11,0:10:17.78:0,18,123	1/1:17,0:16:11.40:107,11,0	0/0:1,0:8:12.21:0,12,36	0/0:2,0:13:20.35:0,20,60	0/0:6,0:13:12.18:0,12,35	0/0:5,0:7:6.09:0,6,17	1/1:8,9:16:3.44:172,3,0	0/1:5,10:14:17.25:119,0,17	0/1:5,2:7:29.15:44,0,29	0/0:10,0:8:23.80:0,24,164	0/0:19,0:18:26.55:0,27,185	0/0:13,0:14:10.63:0,11,152	1/1:20,0:20:30.16:207,30,0	0/1:8,9:17:31.76:135,0,32	1/1:7,7:16:27.75:239,28,0	1/1:2,5:7:5.99:50,6,0
chr10	54052975	.	T	TA	1924.60	PASS	AB=1.000;AC=13;AF=0.241;AN=54;BaseQRankSum=8.790;DP=362;FS=6.185;HRun=0;HaplotypeScore=56.8104;InbreedingCoeff=0.6002;MQ=49.71;MQ0=17;MQRankSum=-2.592;QD=13.65;ReadPosRankSum=4.661;VQSLOD=4.4480;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:17.23:0,17,97	0/0:7,0:7:11.78:0,12,74	0/0:7,0:5:12.03:0,12,149	./.	1/1:1,22:23:54.12:611,54,0	0/0:16,0:16:5.22:0,5,77	0/0:7,0:6:3.47:0,3,95	0/0:18,0:15:17.97:0,18,207	1/1:2,13:13:39.11:446,39,0	0/1:16,0:14:7.98:8,0,136	0/1:10,0:10:2.25:2,0,61	0/0:17,0:17:45.86:0,46,545	0/0:11,0:10:29.92:0,30,328	1/1:4,12:15:31.15:387,31,0	0/0:8,0:8:20.51:0,21,123	0/0:12,0:12:32.21:0,32,192	0/0:12,0:12:29.80:0,30,225	0/0:6,0:5:11.89:0,12,84	0/0:13,0:12:17.42:0,17,142	0/1:15,0:14:0.85:1,0,90	0/0:6,0:6:11.16:0,11,121	0/0:13,0:10:27.08:0,27,354	0/0:20,0:18:39.09:0,39,477	0/0:15,0:13:33.09:0,33,406	1/1:4,18:22:57.07:625,57,0	0/0:18,0:17:20.29:0,20,238	0/1:18,0:17:0.37:0,0,119	0/1:6,0:6:0.07:0,0,2
chr10	54053095	.	CAT	C	941.67	PASS	AB=1.000;AC=25;AF=0.463;AN=54;BaseQRankSum=3.044;DP=175;FS=15.744;HRun=0;HaplotypeScore=41.9485;InbreedingCoeff=0.4365;MQ=52.25;MQ0=2;MQRankSum=-2.718;QD=12.73;ReadPosRankSum=0.140;VQSLOD=1.1643;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,3:8:20.95:200,21,0	0/1:4,0:4:11.76:26,0,12	0/0:13,0:10:27.04:0,27,446	0/0:6,0:5:15.05:0,15,246	0/0:8,0:7:6.02:0,6,88	0/1:4,0:4:8.73:67,0,9	1/1:2,2:3:6:70,6,0	1/1:6,0:4:2.87:8,3,0	0/0:10,0:9:21.06:0,21,381	1/1:3,0:3:9:95,9,0	0/1:2,0:2:27:27,0,48	0/0:7,0:7:14.73:0,15,262	0/0:6,0:6:15.04:0,15,242	0/0:6,0:6:15.05:0,15,256	1/1:3,0:3:9:83,9,0	1/1:1,0:1:3:26,3,0	1/1:9,1:10:6.54:198,7,0	1/1:1,0:1:2.98:21,3,0	1/1:1,0:1:3:27,3,0	0/0:2,0:2:0.47:0,0,1	1/1:8,1:8:3.96:110,4,0	0/0:13,0:13:39.13:0,39,673	0/0:4,0:4:6.01:0,6,110	0/0:15,0:15:39.13:0,39,690	0/0:11,0:11:27.09:0,27,479	0/1:11,0:10:16.20:75,0,16	0/1:7,0:7:3.41:85,0,3	./.
chr10	54053096	.	AT	A	972.45	PASS	AB=0.667;AC=29;AF=0.537;AN=54;BaseQRankSum=2.163;DP=171;FS=35.578;HRun=1;HaplotypeScore=39.2139;InbreedingCoeff=0.6936;MQ=52.28;MQ0=2;MQRankSum=-2.734;QD=13.51;ReadPosRankSum=-0.873;VQSLOD=0.4527;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,4:8:17.05:133,17,0	1/1:0,4:4:2.61:20,3,0	0/0:13,0:10:24.03:0,24,335	0/0:7,0:6:17.83:0,18,192	0/0:8,0:7:5.98:0,6,85	1/1:1,3:4:8.74:63,9,0	1/1:2,2:3:5.88:36,6,0	1/1:2,4:4:11.99:102,12,0	0/0:8,0:7:21.07:0,21,298	1/1:0,3:3:8.99:77,9,0	0/1:1,1:2:15.24:15,0,39	0/0:7,0:7:17.98:0,18,249	0/0:6,0:6:15.05:0,15,221	0/0:5,0:5:15.04:0,15,198	1/1:1,2:3:9.01:85,9,0	1/1:0,1:1:2.97:20,3,0	1/1:3,7:10:24.36:192,24,0	1/1:0,1:1:2.98:22,3,0	1/1:0,1:1:2.98:21,3,0	0/0:1,0:2:0.47:0,0,1	1/1:5,4:8:20.90:165,21,0	0/0:14,0:14:39.09:0,39,553	0/0:4,0:4:6.02:0,6,95	0/0:14,0:14:39.11:0,39,572	0/0:11,0:11:27.09:0,27,384	1/1:6,4:9:23.79:184,24,0	1/1:4,2:6:2.99:29,3,0	./.
chr10	54053103	.	CA	C	1319.64	PASS	AB=0.944;AC=35;AF=0.648;AN=54;BaseQRankSum=3.209;DP=176;FS=22.516;HRun=1;HaplotypeScore=36.9038;InbreedingCoeff=0.5573;MQ=55.27;MQ0=2;MQRankSum=-0.646;QD=12.57;ReadPosRankSum=-1.180;VQSLOD=0.3555;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,5:8:23.84:184,24,0	1/1:5,1:6:11.93:91,12,0	0/0:12,0:8:23.96:0,24,249	0/0:8,0:7:20.75:0,21,216	0/0:6,0:5:0.75:0,1,4	1/1:1,3:4:8.94:64,9,0	1/1:3,2:4:8.96:71,9,0	1/1:6,0:1:2.96:19,3,0	1/1:8,0:7:13.41:45,13,0	1/1:0,3:3:8.99:81,9,0	0/1:4,1:4:29.82:40,0,30	0/0:8,0:8:18.89:0,19,264	0/0:6,0:6:14.99:0,15,190	0/1:5,0:5:12.83:13,0,25	1/1:3,1:4:12.01:113,12,0	1/1:1,1:2:5.98:48,6,0	1/1:2,7:9:26.89:215,27,0	1/1:0,1:1:3:25,3,0	1/1:0,1:1:2.98:22,3,0	1/1:2,0:2:2.96:20,3,0	1/1:5,4:8:20.99:181,21,0	0/0:14,0:14:35.98:0,36,459	0/0:3,0:3:6.02:0,6,87	0/0:14,0:14:33.09:0,33,460	0/1:11,0:11:6.56:11,0,7	1/1:10,3:12:26.93:218,27,0	1/1:1,2:3:5.93:44,6,0	./.
chr10	54054010	.	C	CCGGGTGTGTTTG	29642.80	PASS	AC=38;AF=0.731;AN=52;BaseQRankSum=-3.998;DP=470;FS=9.235;HRun=0;HaplotypeScore=115.3892;InbreedingCoeff=0.9684;MQ=49.94;MQ0=13;MQRankSum=-14.244;QD=95.93;ReadPosRankSum=-0.067;VQSLOD=4.5333;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,7:16:21.07:1073,21,0	1/1:2,3:6:9.03:412,9,0	0/0:34,0:16:45.11:0,45,1521	0/0:38,0:16:39.11:0,39,1407	1/1:2,0:15:30.10:1361,30,0	1/1:8,8:16:33.11:1713,33,0	1/1:5,3:5:12.04:551,12,0	./.	1/1:3,0:9:18.06:1033,18,0	1/1:10,6:19:45.15:2306,45,0	1/1:12,10:20:36.12:1652,36,0	0/0:12,0:11:33.11:0,33,1236	0/0:11,0:11:33.10:0,33,1164	1/1:1,0:13:33.11:1909,33,0	1/1:7,15:19:36.12:1885,36,0	1/1:7,7:13:30.10:1716,30,0	1/1:5,3:8:12:567,12,0	1/1:3,4:6:12.04:750,12,0	1/1:5,3:10:24.05:836,24,0	1/1:12,14:25:57.19:2711,57,0	./.	0/0:20,0:20:60.21:0,60,2042	0/0:17,0:17:48.15:0,48,1744	0/0:25,0:25:72.25:0,72,2664	1/1:5,0:17:24.08:1223,24,0	1/1:12,14:23:63.22:3160,63,0	1/1:15,18:35:65.45:3442,65,0	1/1:2,6:8:24.08:1341,24,0
chr10	54054327	.	CTA	C	2984.53	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=9.851;DP=674;FS=5.044;HRun=0;HaplotypeScore=80.6078;InbreedingCoeff=0.9838;MQ=53.43;MQ0=11;MQRankSum=2.503;QD=33.92;ReadPosRankSum=2.106;VQSLOD=6.1304;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:90.31:0,90,1726	0/0:10,0:10:24.08:0,24,457	0/0:21,0:7:14.83:0,15,244	0/0:13,0:6:12.04:0,12,210	1/1:0,24:23:45.15:650,45,0	0/0:25,0:25:75.24:0,75,1399	0/0:26,0:26:75.22:0,75,1359	0/0:32,0:28:81.27:0,81,1519	1/1:1,24:25:17.56:1035,18,0	0/0:22,0:21:60.19:0,60,1122	0/0:26,0:26:60.68:0,61,1118	0/0:19,0:19:57.16:0,57,1054	0/0:19,0:19:57.18:0,57,1067	1/1:0,21:21:54.18:819,54,0	0/0:24,0:24:66.22:0,66,1264	0/0:22,0:22:63.22:0,63,1216	0/0:25,0:25:72.25:0,72,1378	0/0:25,0:25:69.20:0,69,1275	0/0:28,0:16:48.12:0,48,865	0/0:35,0:35:90.29:0,90,1692	0/0:27,0:27:81.28:0,81,1529	0/0:21,0:21:42.14:0,42,809	0/0:38,0:37:90.30:0,90,1731	0/0:22,0:22:57.20:0,57,1090	1/1:1,17:18:41.06:640,41,0	0/0:31,0:31:93.30:0,93,1734	0/0:30,0:30:87.26:0,87,1585	0/0:15,0:15:45.10:0,45,822
chr10	54055221	.	AC	A	1578.50	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=10.085;DP=650;FS=9.672;HRun=1;HaplotypeScore=91.9680;InbreedingCoeff=0.9972;MQ=56.05;MQ0=10;MQRankSum=-1.339;QD=17.54;ReadPosRankSum=-1.052;VQSLOD=2.7151;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:20:48.16:0,48,767	0/0:11,0:11:27.06:0,27,406	0/0:31,0:23:69.17:0,69,1025	0/0:17,0:15:42.13:0,42,625	1/1:0,28:25:48.12:649,48,0	0/0:38,0:38:75.26:0,75,1198	0/0:14,0:13:33.11:0,33,527	0/0:31,0:25:75.26:0,75,1199	1/1:0,18:15:20.40:293,20,0	0/0:24,0:23:69.24:0,69,1100	0/0:35,0:35:99:0,102,1604	0/0:21,0:21:42.14:0,42,669	0/0:24,0:24:57.16:0,57,864	1/1:0,21:13:24.08:335,24,0	0/0:20,0:20:39.13:0,39,623	0/0:16,0:16:27.08:0,27,408	0/0:36,0:36:75.24:0,75,1172	0/0:21,0:19:48.16:0,48,733	0/0:17,0:11:33.10:0,33,506	0/0:32,0:31:87.16:0,87,1390	0/0:23,0:23:66.23:0,66,1052	0/0:23,0:23:63.21:0,63,1007	0/0:12,0:12:36.12:0,36,571	0/0:16,0:16:48.16:0,48,767	1/1:0,23:22:33.11:461,33,0	0/0:25,0:25:75.26:0,75,1199	0/0:35,0:34:84.27:0,84,1312	0/0:15,0:15:42.02:0,42,588
chr10	54055333	.	G	GC	1634.72	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=5.331;DP=594;FS=1.289;HRun=1;HaplotypeScore=63.4833;InbreedingCoeff=0.9965;MQ=52.84;MQ0=5;MQRankSum=-1.491;QD=25.15;ReadPosRankSum=4.342;VQSLOD=3.6898;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,1:22:54.18:0,54,701	0/0:11,0:11:33.11:0,33,428	0/0:17,0:11:30.09:0,30,358	0/0:25,0:17:45.14:0,45,562	1/1:4,18:18:30.10:449,30,0	0/0:25,0:24:66.21:0,66,855	0/0:12,0:12:30.06:0,30,356	0/0:33,0:29:84.24:0,84,1048	1/1:2,17:17:42.14:628,42,0	0/0:27,0:27:78.23:0,78,976	0/0:27,0:26:66.21:0,66,856	0/0:16,0:16:42.14:0,42,545	0/0:21,0:21:60.19:0,60,778	1/1:0,10:8:18.06:269,18,0	0/0:17,0:17:27.03:0,27,330	0/0:10,0:10:27.09:0,27,350	0/0:30,0:30:78.21:0,78,992	0/0:19,0:19:48.12:0,48,605	0/0:20,0:20:57.14:0,57,709	0/0:33,0:33:90.29:0,90,1165	0/0:16,0:16:45.12:0,45,557	0/0:18,0:18:42.14:0,42,545	0/0:24,0:24:54.12:0,54,667	0/0:24,0:24:66.20:0,66,842	1/1:1,13:13:30.10:449,30,0	0/0:25,0:25:75.23:0,75,958	0/0:33,0:33:83.94:0,84,1027	0/0:20,3:20:45.15:0,45,584
chr10	54055914	.	T	TA	80.55	PASS	AC=2;AF=0.037;AN=54;BaseQRankSum=1.048;DP=653;FS=3.898;HRun=0;HaplotypeScore=59.9869;InbreedingCoeff=0.8149;MQ=51.13;MQ0=52;MQRankSum=-3.611;QD=5.37;ReadPosRankSum=-2.827;VQSLOD=2.7498;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:33:78.23:0,78,1054	0/0:7,0:6:12:0,12,167	./.	0/0:24,0:1:3.01:0,3,41	0/0:27,0:26:60.19:0,60,822	0/0:34,0:30:75.19:0,75,976	0/0:17,0:17:24.08:0,24,333	1/1:3,12:6:17.95:171,18,0	0/0:25,0:23:60.16:0,60,801	0/0:32,0:29:84.01:0,84,1129	0/0:26,0:26:66.22:0,66,922	0/0:17,0:17:36.04:0,36,488	0/0:11,0:11:27.09:0,27,377	0/0:14,0:14:24.08:0,24,335	0/0:21,0:20:47.83:0,48,670	0/0:25,0:23:45.06:0,45,584	0/0:34,0:32:81.25:0,81,1111	0/0:32,0:31:75.16:0,75,1000	0/0:17,0:11:33.01:0,33,399	0/0:31,0:30:87.27:0,87,1183	0/0:11,0:9:24.08:0,24,335	0/0:25,0:24:59.86:0,60,817	0/0:21,0:21:51.17:0,51,712	0/0:30,0:30:75.25:0,75,1046	0/0:18,0:18:48.13:0,48,649	0/0:29,0:29:84.20:0,84,1102	0/0:37,0:36:78.26:0,78,1087	0/0:22,0:20:54.18:0,54,754
chr10	54056740	.	G	GA	2585.41	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-5.971;DP=471;FS=28.582;HRun=5;HaplotypeScore=46.7172;InbreedingCoeff=0.9948;MQ=78.57;MQ0=0;MQRankSum=0.173;QD=32.73;ReadPosRankSum=0.930;VQSLOD=1.5311;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:63.16:0,63,677	0/0:7,0:7:21.05:0,21,226	0/0:14,0:14:23.94:0,24,236	0/0:8,0:8:20.02:0,20,199	1/1:1,32:33:96.12:1167,96,0	0/0:18,0:18:48.10:0,48,508	0/0:12,0:12:36.09:0,36,387	0/0:25,0:25:75.17:0,75,798	1/1:1,22:23:57.19:750,57,0	0/0:13,0:13:36.09:0,36,387	0/0:19,0:19:57.14:0,57,612	0/0:26,0:26:72.18:0,72,773	0/0:17,0:17:48.12:0,48,516	1/1:1,8:9:24.08:316,24,0	0/0:21,0:21:57.14:0,57,612	0/0:12,0:12:33.08:0,33,355	0/0:15,0:15:39.10:0,39,419	0/0:13,0:13:33.06:0,33,344	0/0:14,0:14:33.07:0,33,348	0/0:23,0:23:63.12:0,63,665	0/0:22,0:22:60.15:0,60,645	0/0:15,0:15:42.11:0,42,451	0/0:16,0:16:39.10:0,39,419	0/0:14,0:14:39.10:0,39,419	1/1:1,13:14:39.13:513,39,0	0/0:21,0:21:54.13:0,54,572	0/0:18,0:18:42.10:0,42,451	0/0:7,0:7:21.05:0,21,226
chr10	54057543	.	CT	C	2325.41	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=12.801;DP=538;FS=7.425;HRun=1;HaplotypeScore=75.8636;InbreedingCoeff=0.9685;MQ=88.26;MQ0=0;MQRankSum=-6.678;QD=33.22;ReadPosRankSum=-0.363;VQSLOD=2.6815;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:96.31:0,96,1505	0/0:7,0:7:21.07:0,21,335	0/0:17,0:17:51.17:0,51,793	0/0:26,0:26:76.80:0,77,1161	1/1:0,12:12:21.07:292,21,0	0/0:15,0:15:45.07:0,45,665	0/0:31,0:31:93.30:0,93,1459	0/0:24,0:24:69.23:0,69,1100	1/1:1,20:21:63.11:818,63,0	0/0:15,0:15:45.14:0,45,696	0/0:8,0:8:24.08:0,24,383	0/0:22,0:22:66.23:0,66,1055	0/0:21,0:21:63.18:0,63,957	1/1:2,23:25:75.20:1005,75,0	0/0:20,0:20:60.20:0,60,959	0/0:16,0:16:48.16:0,48,767	0/0:30,0:30:90.26:0,90,1371	0/0:12,0:12:36.12:0,36,575	0/0:26,0:26:78.20:0,78,1106	0/0:15,0:15:45.14:0,45,696	0/0:36,0:36:99:0,108,1702	0/0:13,0:13:39.13:0,39,621	0/0:14,0:14:42.14:0,42,671	0/0:24,0:24:72.23:0,72,1121	1/1:4,8:12:32.98:370,33,0	0/0:16,0:16:48.16:0,48,768	0/0:26,0:26:78.25:0,78,1223	0/0:2,0:2:6.02:0,6,96
chr10	54057603	.	GC	G	2130.78	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=13.022;DP=619;FS=7.145;HRun=4;HaplotypeScore=96.3733;InbreedingCoeff=0.9700;MQ=83.55;MQ0=0;MQRankSum=-5.959;QD=24.21;ReadPosRankSum=3.209;VQSLOD=2.2634;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,135,1855	0/0:7,0:7:21.07:0,21,292	0/0:21,0:21:60.18:0,60,808	0/0:22,0:22:65.54:0,66,835	1/1:1,20:21:29.96:338,30,0	0/0:17,0:17:42.14:0,42,588	0/0:23,0:23:66.20:0,66,905	0/0:27,0:27:75.21:0,75,1011	1/1:2,22:24:63.19:755,63,0	0/0:16,0:16:42.14:0,42,587	0/0:20,0:20:54.18:0,54,753	0/0:20,0:20:60.20:0,60,834	0/0:23,0:23:66.20:0,66,906	1/1:2,27:29:36.18:838,36,0	0/0:25,0:25:75.23:0,75,1018	0/0:18,0:18:51.17:0,51,714	0/0:26,0:26:75.25:0,75,1050	0/0:13,0:13:39.13:0,39,546	0/0:30,0:30:87.23:0,87,1158	0/0:21,0:21:63.20:0,63,853	0/0:42,0:42:99:0,126,1727	0/0:20,0:20:60.20:0,60,838	0/0:22,0:22:66.22:0,66,922	0/0:27,0:27:81.27:0,81,1133	1/1:0,14:14:30.09:360,30,0	0/0:21,0:21:63.20:0,63,857	0/0:21,0:21:60.19:0,60,822	0/0:2,0:2:6.02:0,6,84
chr10	54057680	.	AC	A	2714.31	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=7.982;DP=636;FS=4.930;HRun=2;HaplotypeScore=103.7542;InbreedingCoeff=0.9914;MQ=90.19;MQ0=0;MQRankSum=-2.743;QD=33.93;ReadPosRankSum=3.885;VQSLOD=3.6310;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:63,0:63:99:0,187,2765	0/0:14,0:14:39.13:0,39,584	0/0:24,0:24:66.16:0,66,922	0/0:29,0:29:78.11:0,78,1057	1/1:0,22:22:63.20:818,63,0	0/0:23,0:23:63.21:0,63,940	0/0:20,0:20:60.16:0,60,855	0/0:27,0:27:75.25:0,75,1106	1/1:2,20:22:57.18:737,57,0	0/0:27,0:27:78.26:0,78,1168	0/0:22,0:22:63.21:0,63,936	0/0:13,0:13:39.13:0,39,584	0/0:21,0:21:63.21:0,63,941	1/1:2,20:22:60.19:775,60,0	0/0:25,0:25:75.25:0,75,1113	0/0:19,0:19:54.17:0,54,790	0/0:27,0:27:81.27:0,81,1212	0/0:14,0:14:42.13:0,42,608	0/0:15,0:15:45.14:0,45,632	0/0:18,0:18:54.18:0,54,809	0/0:36,0:36:99:0,105,1554	0/0:21,0:21:60.20:0,60,899	0/0:16,0:16:45.15:0,45,672	0/0:31,0:31:90.30:0,90,1349	1/1:0,14:14:42.14:545,42,0	0/0:28,0:28:84.28:0,84,1240	0/0:19,0:19:57.17:0,57,831	0/0:4,0:4:12.04:0,12,180
chr10	54057853	.	AC	A	1620.05	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=5.611;DP=556;FS=1.257;HRun=1;HaplotypeScore=56.3209;InbreedingCoeff=0.9900;MQ=88.23;MQ0=0;MQRankSum=-1.415;QD=35.22;ReadPosRankSum=3.522;VQSLOD=3.5949;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,105,1678	1/1:0,8:8:21.07:294,21,0	0/0:19,0:19:54.17:0,54,805	0/0:23,0:23:69.03:0,69,953	0/0:7,0:7:18.06:0,18,287	0/0:18,0:18:54.17:0,54,839	0/0:23,0:23:69.22:0,69,1077	0/0:26,0:26:78.27:0,78,1245	0/0:16,0:16:48.13:0,48,717	0/0:23,0:23:69.24:0,69,1103	0/0:16,0:16:45.15:0,45,716	0/0:15,0:15:45.14:0,45,694	0/0:13,0:13:39.13:0,39,607	0/0:20,0:20:60.20:0,60,957	1/1:0,20:20:54.18:755,54,0	1/1:0,18:18:51.17:713,51,0	0/0:24,0:24:72.25:0,72,1147	0/0:21,0:21:63.20:0,63,967	0/0:25,0:25:75.24:0,75,1165	0/0:15,0:15:45.15:0,45,714	0/0:21,0:21:63.19:0,63,947	0/0:20,0:20:60.20:0,60,957	0/0:22,0:22:66.22:0,66,1036	0/0:23,0:23:69.24:0,69,1100	0/0:14,0:14:42.14:0,42,672	0/0:39,0:39:99:0,114,1816	0/0:26,0:26:78.23:0,78,1184	0/0:6,0:6:15.05:0,15,236
chr10	54058401	.	TG	T	1923.24	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=3.403;DP=649;FS=11.629;HRun=3;HaplotypeScore=143.3767;InbreedingCoeff=0.9978;MQ=83.26;MQ0=0;MQRankSum=-3.823;QD=30.53;ReadPosRankSum=1.854;VQSLOD=1.7994;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,108,1479	1/1:0,11:11:24.08:298,24,0	0/0:19,0:19:51.17:0,51,704	0/0:18,0:18:54.17:0,54,736	0/0:24,0:24:66.20:0,66,891	0/0:15,0:15:45.15:0,45,631	0/0:22,0:22:66.22:0,66,924	0/0:27,0:27:69.21:0,69,912	0/0:27,0:27:81.26:0,81,1119	0/0:26,0:26:72.22:0,72,953	0/0:21,0:21:54.18:0,54,737	0/0:25,0:25:75.24:0,75,1059	0/0:33,0:33:84.28:0,84,1208	0/0:22,0:22:63.20:0,63,867	1/1:0,28:28:75.24:930,75,0	1/1:0,24:24:69.18:839,69,0	0/0:20,0:20:57.19:0,57,799	0/0:7,0:7:21.07:0,21,292	0/0:27,0:27:72.21:0,72,941	0/0:23,0:23:63.18:0,63,827	0/0:35,0:35:99:0,102,1426	0/0:24,0:24:72.24:0,72,1036	0/0:26,0:26:72.12:0,72,936	0/0:20,0:20:57.18:0,57,802	0/0:20,0:20:60.20:0,60,827	0/0:24,0:24:66.20:0,66,881	0/0:25,0:25:75.25:0,75,1031	0/0:19,0:19:57.19:0,57,798
chr10	54059481	.	TAAGTGGGCCCTGCAG	T	2361.79	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.158;DP=659;FS=0.000;HRun=0;HaplotypeScore=265.4483;InbreedingCoeff=0.9866;MQ=83.64;MQ0=0;MQRankSum=-7.394;QD=69.46;ReadPosRankSum=0.685;VQSLOD=2.5233;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:62,0:62:99:0,187,13107	0/0:5,0:5:15.05:0,15,1126	0/0:22,0:22:60.19:0,60,2969	0/0:20,0:20:57.20:0,57,3306	0/0:24,0:24:69.20:0,69,4790	0/0:25,0:25:72.25:0,72,5190	0/0:26,0:26:78.27:0,78,5299	0/0:28,0:28:84.29:0,84,5312	0/0:15,0:15:45.15:0,45,3212	0/0:24,0:24:63.22:0,63,4415	0/0:19,0:19:48.16:0,48,3343	0/0:28,0:28:81.28:0,81,5779	0/0:19,0:19:57.20:0,57,3983	0/0:20,0:20:60.21:0,60,4126	0/0:27,0:27:78.27:0,78,5637	0/0:17,0:17:51.18:0,51,3370	1/1:3,18:21:33.11:1482,33,0	1/1:3,10:13:24.08:1001,24,0	0/0:21,0:21:60.21:0,60,3986	0/0:19,0:19:51.18:0,51,3462	0/0:37,0:37:99:0,108,7544	0/0:25,0:25:75.26:0,75,5196	0/0:24,0:24:72.23:0,72,4441	0/0:38,0:38:99:0,114,7977	0/0:15,0:15:45.15:0,45,2990	0/0:26,0:26:78.27:0,78,5353	0/0:33,0:33:93.32:0,93,6797	0/0:6,0:6:18.06:0,18,1163
chr10	54059700	.	C	CT	17570.37	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=-6.730;DP=697;FS=2.439;HRun=5;HaplotypeScore=89.8125;InbreedingCoeff=0.9984;MQ=86.80;MQ0=0;MQRankSum=-4.198;QD=33.66;ReadPosRankSum=0.658;VQSLOD=4.8321;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,45:46:99:1618,123,0	1/1:3,7:10:18.06:237,18,0	0/0:24,0:24:48.09:0,48,501	0/0:24,0:24:48.94:0,49,492	1/1:3,31:34:81.18:1043,81,0	1/1:0,18:18:45.15:590,45,0	1/1:2,26:28:75.24:987,75,0	1/1:8,26:34:75.19:940,75,0	1/1:1,15:16:42.14:552,42,0	1/1:2,35:37:99:1381,105,0	1/1:1,13:14:36.12:474,36,0	0/0:30,0:30:87.19:0,87,924	0/0:16,0:16:45.10:0,45,475	1/1:1,18:19:54.18:708,54,0	1/1:5,17:22:48.16:632,48,0	1/1:1,11:12:33.11:434,33,0	1/1:1,32:33:87.20:1145,87,0	1/1:1,24:25:66.21:868,66,0	1/1:1,26:27:72.21:926,72,0	1/1:0,29:29:78.16:986,78,0	1/1:6,23:29:75.23:971,75,0	0/0:25,0:25:69.17:0,69,741	0/0:30,0:30:78.09:0,78,811	0/0:26,0:26:72.17:0,72,767	1/1:2,13:15:39.13:513,39,0	1/1:4,26:30:78.25:1026,78,0	1/1:1,28:29:84.27:1105,84,0	1/1:1,14:15:33.11:434,33,0
chr10	54060851	.	AC	A	2484.42	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=2.359;DP=457;FS=1.639;HRun=1;HaplotypeScore=54.4128;InbreedingCoeff=0.8847;MQ=72.32;MQ0=0;MQRankSum=-3.206;QD=29.58;ReadPosRankSum=1.116;VQSLOD=3.4032;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:87.30:0,87,1386	0/0:6,0:6:18.06:0,18,288	0/0:11,0:11:33.08:0,33,465	0/1:13,0:13:2.45:2,0,281	1/1:0,22:22:66.22:923,66,0	0/0:28,0:27:84.29:0,84,1340	0/0:10,0:10:30.10:0,30,480	0/0:24,0:23:72.23:0,72,1110	1/1:0,15:15:36.12:503,36,0	0/0:21,0:21:63.21:0,63,997	0/0:21,0:21:60.20:0,60,954	0/0:14,0:14:42.14:0,42,667	0/0:14,0:14:42.14:0,42,671	1/1:0,13:13:33.11:461,33,0	0/0:10,0:10:30.10:0,30,479	0/0:10,0:10:30.10:0,30,480	0/0:15,0:15:45.12:0,45,692	0/0:26,0:26:78.27:0,78,1233	0/0:13,0:13:39.13:0,39,620	0/0:16,0:16:48.16:0,48,765	0/0:10,0:10:30.10:0,30,480	0/0:12,0:12:36.12:0,36,573	0/0:18,0:18:54.18:0,54,860	0/0:10,0:10:30.10:0,30,476	1/1:0,21:21:54.18:755,54,0	0/0:24,0:24:72.25:0,72,1150	0/0:29,0:29:87.30:0,87,1379	0/0:2,0:2:6.02:0,6,96
chr10	54061692	.	C	CGTGT	1696.32	PASS	AB=0.954;AC=37;AF=0.804;AN=46;BaseQRankSum=-3.052;DP=579;FS=3.190;HRun=0;HaplotypeScore=115.6560;InbreedingCoeff=0.3825;MQ=70.47;MQ0=11;MQRankSum=0.433;QD=4.17;ReadPosRankSum=-0.722;VQSLOD=1.7708;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:22,9:33:2.32:69,2,0	1/1:10,0:10:9.01:146,9,0	./.	./.	1/1:21,6:26:3.01:70,3,0	1/1:10,5:18:3.01:70,3,0	1/1:18,0:20:6.54:35,7,0	0/1:13,0:13:0:0,0,0	1/1:23,0:23:5.97:45,6,0	0/1:21,2:25:7.23:101,0,7	1/1:11,0:10:2.83:39,3,0	0/0:15,0:15:3:0,3,28	1/1:10,0:10:0.47:1,0,0	1/1:23,0:23:5.32:123,5,0	1/1:26,0:24:9.02:163,9,0	1/1:18,2:21:2.68:69,3,0	1/1:30,0:30:18.92:321,19,0	1/1:15,0:15:15.49:227,15,0	./.	1/1:8,0:8:0.47:1,0,0	1/1:45,0:44:15.04:210,15,0	0/0:15,0:15:5.96:0,6,47	0/1:19,0:19:0.39:0,0,38	0/0:18,0:24:15.02:0,15,139	./.	1/1:15,0:15:9.97:104,10,0	1/1:12,0:12:3.70:25,4,0	./.
chr10	54063678	.	T	TCC	5885.44	PASS	AB=1.000;AC=35;AF=0.625;AN=56;BaseQRankSum=7.906;DP=547;FS=18.568;HRun=8;HaplotypeScore=129.0319;InbreedingCoeff=0.8722;MQ=82.04;MQ0=0;MQRankSum=-3.005;QD=17.52;ReadPosRankSum=-1.767;VQSLOD=1.4569;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:20,3:41:36.09:432,36,0	1/1:5,0:8:2.99:29,3,0	0/1:14,0:14:23.40:23,0,179	0/0:18,0:19:36.04:0,36,386	0/0:21,0:21:33.50:0,33,369	1/1:5,9:15:26.58:389,27,0	1/1:3,16:21:47.65:721,48,0	1/1:9,13:22:36.05:509,36,0	0/0:15,0:15:36.04:0,36,388	1/1:3,4:12:17.03:208,17,0	1/1:1,6:7:9.03:143,9,0	0/0:28,0:28:78.18:0,78,860	0/0:21,0:21:57.14:0,57,635	0/0:26,0:26:72.19:0,72,802	1/1:13,0:26:36.92:362,37,0	1/1:6,1:14:24:220,24,0	1/1:4,0:38:81.97:283,82,0	1/1:2,0:21:45.40:168,45,0	1/1:7,4:11:12.03:168,12,0	1/1:3,6:10:17.54:245,18,0	1/1:9,24:34:50.76:773,51,0	0/0:17,0:17:25.30:0,25,298	0/0:8,0:8:8.97:0,9,100	0/0:33,0:32:84.15:0,84,923	0/0:23,0:23:48.08:0,48,535	1/1:6,12:21:36.10:546,36,0	1/1:2,10:13:27.09:428,27,0	1/1:0,8:8:15.05:238,15,0
chr10	54063765	.	ACT	A	3731.74	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=7.829;DP=630;FS=8.306;HRun=0;HaplotypeScore=87.7740;InbreedingCoeff=0.9954;MQ=91.01;MQ0=0;MQRankSum=-1.787;QD=38.08;ReadPosRankSum=2.861;VQSLOD=5.8658;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:96.33:0,96,1759	0/0:6,0:6:15.05:0,15,275	0/0:28,0:28:75.26:0,75,1295	0/0:24,0:24:66.19:0,66,1143	1/1:1,30:31:84.28:1196,84,0	0/0:17,0:17:51.16:0,51,903	0/0:19,0:19:51.02:0,51,928	0/0:22,0:22:60.17:0,60,1049	1/1:1,17:18:48.16:688,48,0	0/0:29,0:29:87.29:0,87,1567	0/0:11,0:11:33.11:0,33,605	0/0:18,0:18:54.19:0,54,978	0/0:21,0:21:57.20:0,57,1045	1/1:1,16:17:48.16:687,48,0	0/0:16,0:16:48.16:0,48,873	0/0:16,0:16:42.14:0,42,770	0/0:45,0:45:99:0,126,2299	0/0:24,0:24:66.20:0,66,1153	0/0:18,0:18:48.16:0,48,880	0/0:16,0:16:48.16:0,48,880	0/0:27,0:27:75.24:0,75,1344	0/0:19,0:19:57.19:0,57,1023	0/0:21,0:21:60.21:0,60,1083	0/0:25,0:24:75.26:0,75,1352	1/1:0,31:32:81.74:1161,82,0	0/0:35,0:35:99:0,105,1907	0/0:27,0:27:81.23:0,81,1443	0/0:11,0:11:33.11:0,33,605
chr10	54063867	.	T	TG	4479.32	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=10.955;DP=546;FS=17.022;HRun=2;HaplotypeScore=107.8302;InbreedingCoeff=0.9956;MQ=82.59;MQ0=0;MQRankSum=-4.059;QD=35.83;ReadPosRankSum=-0.637;VQSLOD=2.8452;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,102,1253	0/0:12,0:12:36.11:0,36,446	0/0:17,0:17:48.13:0,48,577	0/0:16,0:16:15.35:0,15,275	1/1:6,14:20:48.13:638,48,0	0/0:18,0:18:54.14:0,54,637	0/0:25,0:25:72.21:0,72,880	1/1:8,21:29:72.14:956,72,0	1/1:2,20:22:66.19:911,66,0	0/0:27,0:27:78.23:0,78,950	0/0:11,0:11:33.02:0,33,387	0/0:18,0:18:54.17:0,54,670	0/0:14,0:14:42.12:0,42,507	1/1:3,17:20:51.17:715,51,0	0/0:20,0:20:57.13:0,57,667	0/0:11,0:11:30.09:0,30,371	0/0:25,0:25:63.20:0,63,779	0/0:28,0:28:78.11:0,78,901	0/0:11,0:11:30.09:0,30,361	0/0:11,0:11:33.10:0,33,409	0/0:21,0:21:63.20:0,63,779	0/0:19,0:19:48.14:0,48,581	0/0:16,0:16:48.15:0,48,591	0/0:18,0:18:51.15:0,51,621	1/1:3,31:34:90.28:1259,90,0	0/0:27,0:27:78.24:0,78,955	0/0:11,0:11:33.09:0,33,396	0/0:9,0:9:24.08:0,24,297
chr10	54063908	.	TC	T	6850.03	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=9.354;DP=541;FS=3.498;HRun=5;HaplotypeScore=84.8645;InbreedingCoeff=0.9973;MQ=80.14;MQ0=0;MQRankSum=-2.319;QD=28.42;ReadPosRankSum=3.720;VQSLOD=5.3310;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,28:33:87.22:975,87,0	1/1:0,8:9:23.10:244,23,0	0/0:15,0:15:35.91:0,36,463	0/0:20,1:20:49:0,49,582	1/1:2,14:16:29.98:322,30,0	0/0:9,0:9:27.05:0,27,322	0/0:28,0:28:81.27:0,81,1099	1/1:2,18:20:51.14:579,51,0	1/1:3,15:18:45.13:508,45,0	0/0:15,0:15:45.14:0,45,596	0/0:14,0:14:39.12:0,39,519	0/0:21,0:21:63.20:0,63,847	0/0:14,0:14:42.13:0,42,558	1/1:7,17:24:57.15:635,57,0	1/1:2,22:24:60.17:681,60,0	1/1:0,12:12:30.09:340,30,0	1/1:0,27:27:69.20:783,69,0	1/1:2,24:26:69.20:783,69,0	0/0:18,1:19:17.11:0,17,591	0/0:9,0:9:24.05:0,24,283	0/0:42,0:42:99:0,117,1584	0/0:24,0:24:60.07:0,60,798	0/0:12,0:12:33.10:0,33,435	0/0:22,0:22:63.20:0,63,847	1/1:8,24:32:90.22:999,90,0	0/0:15,0:15:42.14:0,42,574	0/0:10,0:10:27.08:0,27,354	0/0:10,0:10:30.10:0,30,410
chr10	54064173	.	A	AGC	17831.02	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-4.733;DP=834;FS=2.482;HRun=0;HaplotypeScore=129.0597;InbreedingCoeff=0.9978;MQ=74.85;MQ0=0;MQRankSum=-3.259;QD=45.14;ReadPosRankSum=0.662;VQSLOD=5.5817;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,132,1992	1/1:1,0:18:49.34:494,49,0	0/0:21,0:21:60.18:0,60,871	0/0:25,0:25:69.19:0,69,998	0/0:31,0:31:87.75:0,88,1297	1/1:0,22:24:60.21:1158,60,0	1/1:3,29:32:78.27:1505,78,0	1/1:0,25:25:75.24:1395,75,0	0/0:21,0:21:63.21:0,63,961	1/1:5,36:41:99:2065,108,0	1/1:3,14:17:39.13:752,39,0	0/0:46,0:46:99:0,138,2108	0/0:34,0:34:99:0,102,1497	0/0:30,0:30:90.28:0,90,1333	1/1:0,0:42:99:1160,117,0	1/1:1,0:32:81.13:791,81,0	0/0:45,0:45:99:0,135,1994	0/0:16,0:16:45.15:0,45,689	1/1:1,22:23:69.24:1315,69,0	1/1:1,23:24:60.21:1157,60,0	1/1:1,55:56:99:2949,154,0	0/0:23,0:23:66.22:0,66,1009	0/0:19,0:19:54.12:0,54,777	0/0:45,0:45:99:0,132,1968	0/0:36,0:36:99:0,105,1607	1/1:2,19:21:60.21:1122,60,0	1/1:0,30:30:87.30:1677,87,0	1/1:1,9:10:15.05:289,15,0
chr10	54064744	.	TG	T	369.43	PASS	AC=16;AF=0.571;AN=28;BaseQRankSum=-0.437;DP=73;FS=0.000;HRun=1;HaplotypeScore=15.5093;InbreedingCoeff=0.5912;MQ=24.69;MQ0=20;MQRankSum=0.399;QD=16.06;ReadPosRankSum=1.083;VQSLOD=3.3986;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	./.	1/1:1,2:3:6.02:74,6,0	1/1:0,1:1:3.01:37,3,0	0/0:4,0:2:5.98:0,6,66	0/0:3,0:3:9.03:0,9,130	1/1:0,1:1:3.01:37,3,0	1/1:0,4:4:3.01:37,3,0	0/0:2,0:2:3.01:0,3,47	./.	0/0:3,0:3:9.03:0,9,126	./.	0/0:3,0:3:9.03:0,9,143	1/1:0,2:2:6.02:74,6,0	./.	./.	1/1:0,2:2:3.01:37,3,0	./.	./.	./.	./.	0/0:6,0:6:17.98:0,18,255	1/1:3,2:4:8.62:84,9,0	1/1:0,5:5:9.03:111,9,0	./.
chr10	54066364	.	AC	A	3440.07	PASS	AB=0.921;AC=54;AF=0.964;AN=56;BaseQRankSum=-3.101;DP=180;FS=23.056;HRun=5;HaplotypeScore=44.5922;InbreedingCoeff=-0.0827;MQ=68.79;MQ0=5;MQRankSum=-1.600;QD=19.11;ReadPosRankSum=-1.519;VQSLOD=1.6215;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,11:11:26.95:263,27,0	1/1:0,1:1:2.88:15,3,0	0/1:16,2:12:28.43:28,0,97	0/1:15,1:6:20.88:21,0,38	1/1:0,5:5:6.01:67,6,0	1/1:0,6:6:14.97:143,15,0	1/1:1,4:5:8.92:72,9,0	1/1:0,13:12:33.06:347,33,0	1/1:0,6:6:11.96:109,12,0	1/1:0,6:6:15.03:159,15,0	1/1:0,2:2:5.93:39,6,0	1/1:1,2:3:6.02:68,6,0	1/1:0,3:3:9.03:102,9,0	1/1:1,6:7:8.98:88,9,0	1/1:0,7:7:21.02:223,21,0	1/1:1,5:6:12.03:135,12,0	1/1:0,5:5:12.03:136,12,0	1/1:1,1:2:3.01:34,3,0	1/1:2,4:6:12.01:123,12,0	1/1:0,1:1:3.01:34,3,0	1/1:0,6:6:15:156,15,0	1/1:0,2:2:5.98:54,6,0	1/1:0,3:3:6.02:68,6,0	1/1:1,7:7:9:90,9,0	1/1:3,11:12:32.97:329,33,0	1/1:1,7:7:21.06:238,21,0	1/1:0,4:4:12.03:129,12,0	1/1:0,5:5:15.04:170,15,0
chr10	54066793	.	AG	A	2192.61	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.243;DP=717;FS=15.283;HRun=2;HaplotypeScore=66.4348;InbreedingCoeff=0.9629;MQ=67.31;MQ0=1;MQRankSum=-0.307;QD=32.73;ReadPosRankSum=0.534;VQSLOD=2.0484;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,123,1821	1/1:0,9:9:24.08:310,24,0	0/0:13,0:13:36.12:0,36,521	0/0:15,1:15:42.11:0,42,596	0/0:21,0:21:63.20:0,63,924	0/0:22,0:22:66.22:0,66,988	0/0:19,0:19:57.17:0,57,814	0/0:29,0:28:81.27:0,81,1212	0/0:29,0:29:87.29:0,87,1301	0/0:27,0:27:78.26:0,78,1151	0/0:12,0:12:36.12:0,36,540	0/0:29,0:29:87.29:0,87,1303	0/0:32,0:32:96.33:0,96,1437	0/0:28,0:28:84.26:0,84,1235	1/1:0,28:28:75.24:974,75,0	1/1:1,29:30:81.26:1051,81,0	0/0:28,0:28:84.28:0,84,1259	0/0:35,0:35:99:0,105,1546	0/0:29,0:29:81.26:0,81,1189	0/0:21,0:21:63.21:0,63,943	0/0:55,0:55:99:0,163,2409	0/0:21,0:21:63.21:0,63,940	0/0:19,0:19:57.19:0,57,854	0/0:49,0:49:99:0,147,2178	0/0:24,0:24:72.24:0,72,1079	0/0:32,0:32:96.29:0,96,1382	0/0:16,0:16:48.16:0,48,717	0/0:2,0:2:6.02:0,6,90
chr10	54068437	.	AG	A	1943.13	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.453;DP=753;FS=2.447;HRun=2;HaplotypeScore=69.7358;InbreedingCoeff=0.9913;MQ=85.94;MQ0=0;MQRankSum=-0.886;QD=34.09;ReadPosRankSum=1.859;VQSLOD=4.1290;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,144,2158	0/0:9,0:9:27.09:0,27,403	0/0:24,0:24:72.22:0,72,1038	0/0:25,0:25:57.24:0,57,834	0/0:21,0:21:63.20:0,63,920	0/0:16,0:15:48.16:0,48,719	0/0:34,0:34:99:0,102,1528	0/0:28,0:28:78.26:0,78,1166	0/0:26,0:26:78.25:0,78,1149	0/0:25,0:25:75.25:0,75,1122	0/0:22,0:22:63.21:0,63,944	0/0:35,0:35:99:0,99,1484	0/0:22,0:22:66.22:0,66,989	0/0:35,0:35:99:0,105,1556	0/0:33,0:33:96.33:0,96,1439	0/0:21,0:21:60.19:0,60,881	1/1:0,39:39:99:1480,114,0	1/1:0,18:18:45.15:584,45,0	0/0:21,0:21:63.16:0,63,892	0/0:15,0:15:42.13:0,42,605	0/0:49,0:49:99:0,141,2111	0/0:30,0:30:87.29:0,87,1301	0/0:19,0:19:57.19:0,57,851	0/0:41,0:41:99:0,123,1842	0/0:33,0:33:96.32:0,96,1421	0/0:25,0:25:75.24:0,75,1081	0/0:32,0:32:90.30:0,90,1349	0/0:6,0:6:15.05:0,15,225
chr10	54069427	.	C	CTTGT	4895.34	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-2.425;DP=725;FS=1.507;HRun=0;HaplotypeScore=116.2478;InbreedingCoeff=0.9785;MQ=68.01;MQ0=0;MQRankSum=-2.043;QD=31.79;ReadPosRankSum=1.912;VQSLOD=5.0671;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:93.32:0,93,1535	1/1:3,0:12:6.02:105,6,0	0/0:25,0:22:19.95:0,20,310	0/0:34,0:32:50.21:0,50,782	1/1:7,12:19:33.11:804,33,0	0/0:27,0:26:60.20:0,60,950	0/0:33,0:33:69.22:0,69,1111	0/0:39,0:39:69.22:0,69,1083	1/1:12,17:30:42.14:1021,42,0	0/0:32,0:32:69.22:0,69,1090	0/0:18,0:18:42.11:0,42,663	0/0:26,0:26:66.19:0,66,1032	0/0:29,0:29:66.21:0,66,1040	1/1:9,19:28:51.18:1244,51,0	1/1:6,0:22:21.07:368,21,0	1/1:3,1:20:30.57:548,31,0	0/0:26,0:26:57.19:0,57,912	0/0:28,0:28:62.51:0,63,1075	0/0:18,0:18:39.12:0,39,611	0/0:20,0:20:48.14:0,48,766	0/0:31,0:31:54.17:0,54,831	0/0:21,0:21:48.13:0,48,763	0/0:19,0:19:42.14:0,42,688	0/0:23,0:23:54.05:0,54,856	1/1:8,12:21:36.12:806,36,0	0/0:28,0:28:54.18:0,54,874	0/0:42,0:42:90.26:0,90,1431	0/0:12,0:13:24.07:0,24,361
chr10	54069656	.	T	TACAC	1079.37	PASS	AB=0.861;AC=25;AF=0.500;AN=50;BaseQRankSum=2.587;DP=497;FS=13.828;HRun=0;HaplotypeScore=105.4389;InbreedingCoeff=0.2334;MQ=74.09;MQ0=11;MQRankSum=-0.238;QD=3.61;ReadPosRankSum=-1.266;VQSLOD=1.2534;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:17,2:27:8.93:164,0,9	1/1:7,0:7:3.01:43,3,0	./.	./.	0/0:14,0:19:12.28:0,12,100	1/1:25,0:24:11.51:168,12,0	1/1:13,5:19:2.66:70,3,0	./.	0/1:13,0:16:10.79:11,0,22	1/1:14,0:12:9.03:132,9,0	1/1:4,0:8:2.61:49,3,0	0/0:16,0:19:20.99:0,21,286	0/0:9,0:9:12.04:0,12,184	0/0:6,0:7:3:0,3,28	1/1:16,0:16:8.61:85,9,0	0/1:17,1:21:34.05:83,0,34	0/1:22,0:21:42.20:42,0,131	0/1:11,0:18:9.91:10,0,120	0/0:12,0:11:6:0,6,63	0/1:15,0:18:6.42:6,0,31	1/1:15,0:19:5.73:35,6,0	0/0:17,0:17:6.02:0,6,92	0/0:14,0:14:15.03:0,15,192	0/0:27,0:27:17.25:0,17,217	0/0:11,0:14:0:0,0,0	1/1:35,0:32:24.50:281,24,0	0/1:20,0:20:10.96:11,0,77	1/1:4,2:7:3.01:52,3,0
chr10	54071002	.	CA	C	3233.06	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=11.299;DP=499;FS=1.301;HRun=7;HaplotypeScore=48.6071;InbreedingCoeff=0.9716;MQ=74.19;MQ0=0;MQRankSum=-1.272;QD=23.43;ReadPosRankSum=2.940;VQSLOD=3.5237;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,111,1353	1/1:0,9:9:24.05:245,24,0	0/0:15,0:15:35.26:0,35,446	0/0:15,0:14:4.81:0,5,303	1/1:6,23:29:69.11:691,69,0	0/0:20,0:20:57.18:0,57,717	0/0:14,0:14:42.13:0,42,528	0/0:25,0:25:63.19:0,63,771	1/1:2,7:9:15.03:153,15,0	0/0:24,0:24:69.22:0,69,867	0/0:15,0:15:42.13:0,42,528	0/0:10,0:10:27.09:0,27,337	0/0:18,0:18:45.14:0,45,564	1/1:3,12:15:33.07:337,33,0	1/1:0,13:13:36.08:367,36,0	1/1:0,21:21:54.12:551,54,0	1/1:0,16:16:42.10:428,42,0	1/1:1,11:12:33.07:336,33,0	0/0:15,0:15:42.13:0,42,528	0/0:24,0:24:66.19:0,66,802	0/0:21,0:21:54.16:0,54,667	0/0:11,0:11:24.08:0,24,302	0/0:18,0:18:42.12:0,42,515	0/0:30,0:30:75.21:0,75,917	1/1:3,11:14:33.07:337,33,0	0/0:28,0:28:78.25:0,78,981	0/0:15,0:15:42.11:0,42,496	0/0:4,0:4:12.04:0,12,151
chr10	54071102	.	GTTGTT	G	4140.21	PASS	AB=0.769;AC=17;AF=0.304;AN=56;BaseQRankSum=7.473;DP=626;FS=2.169;HRun=0;HaplotypeScore=120.2803;InbreedingCoeff=0.8413;MQ=61.18;MQ0=4;MQRankSum=-0.637;QD=23.13;ReadPosRankSum=3.266;VQSLOD=3.2653;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,102,2616	1/1:3,0:8:15.04:174,15,0	0/0:25,0:20:9.03:0,9,151	0/0:17,0:9:8.03:0,8,41	1/1:9,23:32:66.22:1141,66,0	0/0:18,0:18:33.11:0,33,841	0/0:16,0:16:27.08:0,27,695	0/0:26,0:26:30.09:0,30,491	1/1:3,5:8:9.03:165,9,0	0/0:30,0:30:63.22:0,63,1634	0/0:19,0:19:36.12:0,36,856	0/0:7,0:15:12.03:0,12,224	0/0:6,0:19:21.07:0,21,458	1/1:6,18:24:36.12:659,36,0	1/1:3,0:21:27.08:314,27,0	1/1:4,0:16:3.01:35,3,0	1/1:11,24:33:48.16:878,48,0	1/1:8,7:14:26.96:481,27,0	0/0:21,0:19:15.05:0,15,425	0/0:16,0:16:21.07:0,21,585	0/0:7,0:7:15.05:0,15,357	0/0:14,0:32:48.86:0,49,810	0/0:7,0:26:21:0,21,415	0/0:12,0:29:30.10:0,30,578	0/1:14,6:20:99:293,0,473	0/0:38,0:38:78.27:0,78,2136	0/0:30,0:30:66.23:0,66,1854	0/0:12,0:12:33.11:0,33,835
chr10	54071378	.	C	CT	1068.21	PASS	AB=0.842;AC=8;AF=0.143;AN=56;BaseQRankSum=-4.546;DP=606;FS=4.127;HRun=11;HaplotypeScore=80.4754;InbreedingCoeff=0.4441;MQ=70.61;MQ0=1;MQRankSum=-1.094;QD=7.68;ReadPosRankSum=-0.932;VQSLOD=2.3364;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:9,22:34:20.58:317,0,21	0/0:2,0:9:12.21:0,12,36	0/1:10,0:9:1.85:2,0,21	0/0:14,0:14:14.83:0,15,96	0/0:35,0:36:85.66:0,86,652	0/0:15,0:15:23.88:0,24,186	0/0:22,0:22:56.76:0,57,439	0/0:15,0:39:40.66:0,41,118	0/0:20,0:21:45.88:0,46,337	0/0:22,0:24:57.83:0,58,430	0/0:19,1:21:19.39:0,19,323	0/0:16,0:18:37.39:0,37,284	0/0:18,0:18:17.97:0,18,278	0/0:29,0:30:76.71:0,77,586	0/0:2,0:16:28.52:0,29,83	0/0:4,0:15:25.39:0,25,88	1/1:5,22:28:13.48:485,13,0	1/1:8,11:21:14.12:375,14,0	0/1:17,3:20:19.09:19,0,233	0/0:17,0:17:33.31:0,33,256	0/1:22,2:24:4.07:4,0,338	0/0:16,1:17:11.45:0,11,260	0/0:16,0:16:23.88:0,24,185	0/0:33,0:33:89.63:0,90,697	0/0:19,1:20:17.35:0,17,318	0/0:30,0:33:67.65:0,68,501	0/0:23,0:23:44.77:0,45,347	0/0:10,0:10:29.89:0,30,231
chr10	54071575	.	TC	T	4989.83	PASS	AB=0.698;AC=54;AF=0.964;AN=56;BaseQRankSum=1.188;DP=329;FS=4.381;HRun=1;HaplotypeScore=193.5677;InbreedingCoeff=-0.0571;MQ=64.41;MQ0=0;MQRankSum=-1.910;QD=15.17;ReadPosRankSum=4.219;VQSLOD=5.1846;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,14:15:42.34:264,42,0	1/1:0,10:10:29.48:190,29,0	1/1:6,3:7:6.43:102,6,0	0/1:12,1:10:35.25:47,0,35	1/1:1,10:11:5.92:40,6,0	1/1:0,12:12:29.83:198,30,0	1/1:3,11:14:31.12:213,31,0	1/1:4,16:20:56.71:436,57,0	1/1:0,10:10:29.27:189,29,0	1/1:0,8:8:23.80:169,24,0	1/1:0,11:11:20.66:132,21,0	1/1:1,18:18:44.52:290,45,0	1/1:0,5:5:11.87:79,12,0	1/1:1,11:12:23.40:164,23,0	1/1:1,12:13:27.24:193,27,0	1/1:1,6:7:0.92:71,1,0	1/1:0,20:15:41.33:265,41,0	1/1:0,8:7:20.86:151,21,0	1/1:0,16:16:47.68:361,48,0	1/1:0,10:10:24.27:172,24,0	0/1:1,11:11:16.19:70,0,16	1/1:1,11:12:35.48:234,35,0	1/1:0,11:11:20.30:123,20,0	1/1:1,10:9:11.74:72,12,0	1/1:0,5:5:14.80:97,15,0	1/1:1,13:14:38.73:278,39,0	1/1:0,14:14:38.46:266,38,0	1/1:0,6:6:17.81:123,18,0
chr10	54071577	.	TG	T	4473.24	PASS	AB=0.597;AC=52;AF=0.929;AN=56;BaseQRankSum=1.692;DP=328;FS=1.177;HRun=1;HaplotypeScore=194.8108;InbreedingCoeff=0.0870;MQ=62.67;MQ0=0;MQRankSum=-0.006;QD=13.64;ReadPosRankSum=5.249;VQSLOD=4.4635;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,14:15:32.64:202,33,0	1/1:0,10:10:23.54:150,24,0	1/1:6,3:7:7.50:122,8,0	0/1:12,2:11:32.12:82,0,32	0/1:1,10:11:0.16:0,0,0	1/1:0,12:12:29.85:198,30,0	1/1:2,11:13:22.17:149,22,0	1/1:1,16:17:47.71:353,48,0	1/1:0,10:10:17.28:109,17,0	1/1:1,8:9:24.69:171,25,0	1/1:0,11:11:11.76:72,12,0	1/1:1,18:18:47.44:309,47,0	1/1:0,5:5:11.83:79,12,0	1/1:1,11:12:14.48:104,14,0	1/1:1,12:13:9.30:72,9,0	0/1:0,6:7:3.58:50,0,4	1/1:0,20:15:41.30:265,41,0	1/1:0,8:7:20.86:151,21,0	1/1:0,16:16:47.68:360,48,0	1/1:0,10:10:24.24:172,24,0	0/1:1,11:11:11.17:103,0,11	1/1:1,11:12:35.42:226,35,0	1/1:0,11:11:20.23:122,20,0	1/1:1,10:9:11.77:72,12,0	1/1:0,5:5:14.79:97,15,0	1/1:1,13:14:41.69:298,42,0	1/1:0,14:14:35.56:261,36,0	1/1:0,6:6:17.81:123,18,0
chr10	54071596	.	CACACG	C	2480.24	PASS	AB=1.000;AC=35;AF=0.673;AN=52;BaseQRankSum=1.212;DP=397;FS=3.413;HRun=0;HaplotypeScore=191.1295;InbreedingCoeff=0.1667;MQ=46.18;MQ0=21;MQRankSum=-4.006;QD=8.89;ReadPosRankSum=2.506;VQSLOD=2.9702;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:16:4.82:47,5,0	1/1:8,0:8:3.01:42,3,0	0/0:28,0:6:18.02:0,18,236	0/0:24,0:6:6.56:0,7,61	0/1:15,0:15:0.16:1,0,0	0/0:14,0:12:3.28:0,3,22	1/1:13,0:11:2.96:19,3,0	1/1:18,0:17:31.28:368,31,0	1/1:11,0:11:2.89:44,3,0	0/1:11,0:11:43.34:117,0,43	0/0:14,0:14:2.88:0,3,8	0/1:20,0:19:15.86:102,0,16	1/1:7,0:7:12.51:171,13,0	1/1:11,0:11:3.01:33,3,0	1/1:12,3:15:11.92:230,12,0	1/1:3,2:5:9.03:167,9,0	1/1:22,0:17:12.42:123,12,0	1/1:7,0:7:18.06:248,18,0	1/1:11,0:10:5.26:171,5,0	./.	0/0:23,0:22:2.69:0,3,28	0/1:15,0:14:11.66:12,0,22	1/1:11,0:11:3.01:41,3,0	0/1:20,0:18:22.22:35,0,22	./.	1/1:17,0:16:33.99:335,34,0	0/1:18,0:17:27.15:178,0,27	0/1:8,0:8:12.77:150,0,13
chr10	54071600	.	CG	C	4460.88	PASS	AC=50;AF=0.926;AN=54;BaseQRankSum=-1.414;DP=386;FS=16.911;HRun=1;HaplotypeScore=157.8191;InbreedingCoeff=0.4403;MQ=46.56;MQ0=23;MQRankSum=-2.347;QD=13.60;ReadPosRankSum=0.603;VQSLOD=2.8886;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,11:15:1.61:11,2,0	1/1:1,7:8:6.48:67,6,0	0/0:28,0:6:18.04:0,18,242	0/0:23,0:5:6.11:0,6,52	1/1:3,11:14:2.85:39,3,0	1/1:1,12:11:9.03:123,9,0	1/1:1,11:10:9.03:124,9,0	1/1:1,13:13:33.96:432,34,0	1/1:1,10:11:2.78:16,3,0	1/1:1,11:12:36.12:498,36,0	1/1:0,12:12:6.02:84,6,0	1/1:2,19:20:18.04:221,18,0	1/1:2,6:8:15.47:185,15,0	1/1:0,10:10:3.01:41,3,0	1/1:5,10:15:14.70:135,15,0	1/1:5,3:7:14.88:158,15,0	1/1:0,21:16:12.43:123,12,0	1/1:2,6:8:21.07:289,21,0	1/1:1,7:8:21.03:260,21,0	./.	1/1:1,21:20:3.01:42,3,0	1/1:2,13:14:6.02:83,6,0	1/1:0,11:11:6.02:83,6,0	1/1:0,20:18:5.72:83,6,0	1/1:3,5:7:9:89,9,0	1/1:5,13:17:51.15:653,51,0	1/1:0,14:15:30.10:413,30,0	1/1:0,8:8:15.05:207,15,0
chr10	54072115	.	CTG	C	915.97	PASS	AB=0.968;AC=31;AF=0.554;AN=56;BaseQRankSum=4.301;DP=444;FS=8.362;HRun=0;HaplotypeScore=82.7308;InbreedingCoeff=0.3500;MQ=40.74;MQ0=24;MQRankSum=-0.281;QD=4.11;ReadPosRankSum=-2.080;VQSLOD=0.7016;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,1:7:5.72:55,6,0	1/1:4,0:4:5.76:34,6,0	0/0:29,0:6:1.97:0,2,37	0/0:68,0:10:3.90:0,4,67	1/1:13,0:12:2.99:24,3,0	1/1:16,1:16:18.61:136,19,0	1/1:9,1:10:3.82:32,4,0	0/0:17,0:16:37.06:0,37,341	1/1:11,1:12:1.93:22,2,0	0/1:17,2:18:99:131,0,139	1/1:10,0:9:0.89:2,1,0	0/0:17,0:16:10.11:0,10,453	0/0:16,0:15:12.89:0,13,254	0/0:13,1:14:0.72:0,1,2	1/1:11,0:11:11.16:86,11,0	1/1:10,3:12:8.35:64,8,0	1/1:9,0:9:11.72:70,12,0	0/1:11,0:10:7.66:60,0,8	0/1:14,1:15:82.02:82,0,158	1/1:11,0:11:10.30:63,10,0	1/1:9,0:9:0.47:1,0,0	0/0:17,0:17:22.54:0,23,511	0/0:12,0:12:26.26:0,26,299	0/0:20,0:17:9.74:0,10,466	1/1:13,1:14:5.68:50,6,0	0/1:16,0:14:66.72:123,0,67	0/1:16,0:14:7.87:51,0,8	0/0:10,0:9:0.66:0,1,6
chr10	54072119	.	CTCTG	C	1060.64	PASS	AB=0.950;AC=32;AF=0.571;AN=56;BaseQRankSum=4.766;DP=455;FS=2.424;HRun=0;HaplotypeScore=92.1961;InbreedingCoeff=0.3479;MQ=39.86;MQ0=24;MQRankSum=-2.257;QD=4.38;ReadPosRankSum=-2.877;VQSLOD=1.2347;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:9,0:7:1.46:16,1,0	1/1:6,0:6:3.32:29,3,0	0/0:36,0:7:12.51:0,13,218	0/0:66,0:9:17.71:0,18,245	1/1:13,0:13:2.92:22,3,0	1/1:18,0:16:15.67:139,16,0	1/1:9,1:10:5.92:50,6,0	0/0:19,0:17:42.08:0,42,891	1/1:12,0:12:8.43:81,8,0	0/1:16,2:17:94.51:95,0,95	0/0:10,0:9:2.62:0,3,11	0/0:18,0:17:44.47:0,44,850	0/0:14,0:14:13.86:0,14,448	1/1:14,0:14:3.16:23,3,0	1/1:5,5:10:2.23:64,2,0	1/1:8,5:12:8.11:69,8,0	1/1:7,2:9:10.54:113,11,0	0/1:10,2:11:44.33:77,0,44	0/1:16,1:17:99:155,0,147	1/1:11,0:10:5.84:39,6,0	0/1:10,0:9:0:0,0,0	0/0:17,0:17:33.57:0,34,747	0/0:11,0:11:4.68:0,5,405	0/0:20,0:17:33.09:0,33,715	1/1:15,0:14:5.68:49,6,0	0/1:15,0:13:32.24:149,0,32	0/1:18,0:16:23.61:37,0,24	1/1:11,0:10:3.48:31,3,0
chr10	54072121	.	CTG	C	711.56	PASS	AB=1.000;AC=32;AF=0.571;AN=56;BaseQRankSum=5.458;DP=456;FS=1.514;HRun=0;HaplotypeScore=88.2815;InbreedingCoeff=0.3683;MQ=39.76;MQ0=23;MQRankSum=-0.915;QD=3.04;ReadPosRankSum=-2.505;VQSLOD=0.9981;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:7,1:7:5.72:54,6,0	1/1:6,0:6:4.48:31,4,0	0/0:38,0:8:15.03:0,15,234	0/0:66,0:11:20.59:0,21,286	1/1:14,0:13:2.98:22,3,0	1/1:16,1:15:15.60:112,16,0	1/1:10,0:10:1.11:15,1,0	0/0:22,0:20:46.87:0,47,808	1/1:12,0:12:3.33:25,3,0	0/1:18,0:17:60.83:61,0,121	1/1:10,0:9:2.04:6,2,0	0/0:18,0:17:42.72:0,43,619	0/0:14,0:14:13.06:0,13,348	0/0:13,1:14:0.94:0,1,2	1/1:9,1:10:8.26:64,8,0	1/1:12,1:12:8.39:66,8,0	1/1:9,0:9:11.83:76,12,0	0/1:11,0:10:41.12:41,0,48	0/1:17,0:17:77.53:78,0,154	1/1:11,0:10:5.79:39,6,0	0/1:9,0:8:0:0,0,0	0/0:19,0:19:36.56:0,37,569	0/1:12,0:12:6.40:6,0,323	0/0:21,0:18:31.81:0,32,502	1/1:13,1:14:5.68:49,6,0	0/1:15,0:13:77.75:98,0,78	1/1:17,0:16:5.71:43,6,0	0/0:10,0:9:1.66:0,2,6
chr10	54072123	.	G	GTC	989.35	PASS	AB=0.890;AC=25;AF=0.463;AN=54;BaseQRankSum=1.398;DP=461;FS=47.307;HRun=0;HaplotypeScore=90.0615;InbreedingCoeff=0.4588;MQ=37.86;MQ0=24;MQRankSum=-5.818;QD=4.90;ReadPosRankSum=-1.535;VQSLOD=0.5416;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:8,1:8:5.30:0,5,29	1/1:4,2:6:3.95:40,4,0	0/0:38,0:7:14.67:0,15,189	0/0:64,0:10:18.04:0,18,205	0/1:12,1:13:0:0,0,0	0/1:14,3:15:1.20:1,0,2	1/1:9,2:11:3.01:50,3,0	0/0:21,0:19:45.01:0,45,572	0/1:12,0:12:8.72:9,0,18	0/1:12,5:16:13.67:213,0,14	0/1:9,2:10:0:0,0,0	0/0:19,0:18:29.99:0,30,363	0/0:15,0:15:23.55:0,24,275	0/0:14,0:14:2.57:0,3,16	1/1:7,3:10:7.25:75,7,0	1/1:11,4:13:1.18:31,1,0	1/1:8,0:8:4.76:23,5,0	0/1:11,0:11:4.99:5,0,33	1/1:13,3:16:6.05:300,6,0	1/1:6,5:10:2.33:8,2,0	./.	0/0:21,0:21:32.84:0,33,397	0/0:11,0:11:21.04:0,21,239	0/0:21,0:18:30.08:0,30,369	0/1:14,2:15:0:0,0,0	1/1:10,7:15:14.58:339,15,0	0/0:12,5:16:7.22:0,7,27	1/1:7,3:8:3.48:51,3,0
chr10	54072133	.	CTGTCCCTG	C	1542.73	PASS	AB=0.919;AC=23;AF=0.411;AN=56;BaseQRankSum=4.736;DP=498;FS=7.096;HRun=0;HaplotypeScore=111.3870;InbreedingCoeff=-0.0117;MQ=36.80;MQ0=27;MQRankSum=-3.584;QD=5.93;ReadPosRankSum=-1.359;VQSLOD=1.4087;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:10:4.67:42,5,0	0/1:8,0:8:0.50:59,0,0	0/0:47,0:9:22.32:0,22,502	0/0:72,0:15:29.78:0,30,673	0/1:5,13:17:0:0,0,0	1/1:13,1:12:2.77:74,3,0	0/0:11,0:11:6.38:0,6,57	0/1:18,5:22:99:192,0,1079	0/1:9,0:10:12.41:12,0,36	0/1:20,0:21:59.67:497,0,60	1/1:12,0:12:2.86:47,3,0	0/0:19,0:18:30.09:0,30,811	0/0:14,0:14:1.63:0,2,771	0/1:15,2:17:4.42:14,0,4	0/1:12,0:13:23.76:118,0,24	0/1:15,0:13:19.42:19,0,29	1/1:6,0:6:8.92:84,9,0	0/1:8,0:8:29.12:154,0,29	0/1:15,0:14:54.44:54,0,256	0/1:14,0:13:0.03:0,0,0	0/1:8,0:7:0:0,0,0	0/0:26,0:26:40.09:0,40,1074	0/0:10,0:10:13.18:0,13,637	0/0:22,0:19:39.19:0,39,886	0/0:11,6:16:6.44:0,6,28	0/1:16,0:14:99:173,0,141	0/1:15,0:17:4.92:113,0,5	0/1:9,0:7:22.51:43,0,23
chr10	54072134	.	TGTCC	T	1310.15	PASS	AB=0.981;AC=25;AF=0.463;AN=54;BaseQRankSum=5.863;DP=490;FS=21.826;HRun=0;HaplotypeScore=97.8460;InbreedingCoeff=0.2176;MQ=36.67;MQ0=27;MQRankSum=-4.818;QD=5.67;ReadPosRankSum=-0.219;VQSLOD=0.6933;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:10,0:9:1.88:26,0,2	1/1:8,0:8:0.67:46,1,0	0/0:47,0:9:20.83:0,21,480	0/0:72,0:15:29.89:0,30,641	0/0:18,0:17:0:0,0,0	1/1:14,0:12:1.75:67,2,0	0/0:10,0:10:5.81:0,6,35	0/1:24,0:22:99:141,0,1214	0/1:10,0:10:4.90:5,0,20	1/1:22,0:21:8.74:432,9,0	1/1:13,0:12:2.51:46,3,0	0/0:18,0:17:33.07:0,33,732	0/0:12,0:12:12.55:0,13,603	0/1:16,1:17:4.37:4,0,5	1/1:14,0:14:3.33:100,3,0	0/1:15,0:13:20.82:21,0,22	1/1:3,3:6:5.81:67,6,0	0/1:7,1:8:31.81:94,0,32	0/1:14,0:13:80.57:105,0,81	0/1:13,0:12:0.07:0,0,0	./.	0/0:27,0:27:24.39:0,24,875	0/0:10,0:10:22.29:0,22,492	0/0:19,0:16:15.86:0,16,816	0/0:15,1:15:6.74:0,7,27	0/1:16,0:14:11.47:169,0,11	1/1:17,1:17:2.89:98,3,0	1/1:9,0:7:5.50:45,6,0
chr10	54076477	.	T	TG	7389.41	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-12.479;DP=738;FS=4.066;HRun=6;HaplotypeScore=69.1900;InbreedingCoeff=0.9999;MQ=87.70;MQ0=0;MQRankSum=-2.640;QD=30.53;ReadPosRankSum=2.995;VQSLOD=5.6125;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,107,1048	0/0:14,0:14:36.08:0,36,367	0/0:30,0:30:60.10:0,60,661	0/0:21,0:21:54.82:0,55,510	0/0:21,0:21:63.12:0,63,634	1/1:3,18:21:60.64:732,61,0	1/1:3,29:32:81.25:1016,81,0	0/0:37,0:37:90.19:0,90,916	0/0:34,0:34:99:0,99,996	1/1:3,18:21:51.13:620,51,0	1/1:1,14:15:36.12:452,36,0	0/0:32,0:32:90.19:0,90,914	0/0:26,0:26:71.88:0,72,707	0/0:40,0:40:99:0,105,1059	0/0:43,0:43:99:0,120,1223	0/0:33,0:33:84.19:0,84,857	0/0:16,0:16:39.08:0,39,398	0/0:18,0:18:54.12:0,54,550	1/1:3,16:19:48.09:583,48,0	1/1:2,16:18:42.13:527,42,0	1/1:4,47:51:99:1585,126,0	0/0:15,0:15:39.05:0,39,387	0/0:21,0:21:60.13:0,60,611	0/0:30,0:30:75.15:0,75,757	0/0:24,0:24:72.16:0,72,732	1/1:4,18:22:51.15:630,51,0	1/1:4,23:27:63.20:792,63,0	1/1:0,16:16:36.12:453,36,0
chr10	54077875	.	CCT	C	7550.86	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=15.178;DP=799;FS=1.776;HRun=0;HaplotypeScore=94.8682;InbreedingCoeff=0.9999;MQ=90.65;MQ0=2;MQRankSum=-1.681;QD=38.52;ReadPosRankSum=4.152;VQSLOD=6.7434;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,150,2738	1/1:0,12:12:30.10:438,30,0	0/0:29,0:29:74.47:0,74,1156	0/0:37,0:37:98.64:0,99,1735	1/1:3,32:34:90.30:1325,90,0	0/0:24,0:24:69.24:0,69,1292	0/0:31,0:31:93.27:0,93,1647	0/0:32,0:32:93.30:0,93,1614	1/1:0,30:30:78.26:1149,78,0	0/0:30,0:30:87.29:0,87,1589	0/0:15,0:15:45.15:0,45,843	0/0:21,0:21:63.22:0,63,1167	0/0:19,0:19:57.20:0,57,1068	1/1:1,25:26:69.23:1016,69,0	1/1:2,39:40:99:1546,105,0	1/1:1,33:34:93.31:1370,93,0	0/0:24,0:24:72.25:0,72,1348	0/0:22,0:22:66.22:0,66,1208	0/0:22,0:22:66.21:0,66,1198	0/0:32,0:32:87.30:0,87,1629	0/0:58,0:58:99:0,168,3016	0/0:24,0:24:72.23:0,72,1310	0/0:25,0:25:66.23:0,66,1217	0/0:21,0:21:60.19:0,60,1092	1/1:0,18:18:48.16:707,48,0	0/0:33,0:33:99:0,99,1827	0/0:34,0:34:96.30:0,96,1731	0/0:19,0:19:54.19:0,54,1008
chr10	54079442	.	AT	A	14454.49	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=13.338;DP=826;FS=28.118;HRun=3;HaplotypeScore=135.7167;InbreedingCoeff=1.0000;MQ=85.80;MQ0=0;MQRankSum=-2.843;QD=33.38;ReadPosRankSum=0.620;VQSLOD=2.4435;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,150,2096	1/1:2,14:16:42.13:520,42,0	0/0:26,0:26:71.99:0,72,967	0/0:28,0:28:75.57:0,76,979	1/1:0,26:26:72.23:890,72,0	1/1:0,17:17:45.14:557,45,0	1/1:1,28:29:78.25:967,78,0	1/1:1,28:29:84.26:1039,84,0	1/1:2,37:39:99:1338,108,0	1/1:0,28:28:84.24:1017,84,0	1/1:0,24:24:66.21:817,66,0	0/0:30,0:30:90.29:0,90,1279	0/0:37,0:37:99:0,111,1598	1/1:0,25:25:66.21:818,66,0	1/1:1,37:38:99:1265,102,0	1/1:2,33:35:87.27:1078,87,0	1/1:3,33:36:36.99:988,37,0	1/1:1,27:28:75.24:929,75,0	0/0:24,0:24:69.23:0,69,992	0/0:32,0:32:90.30:0,90,1296	0/0:41,0:41:99:0,120,1705	0/0:34,0:34:96.32:0,96,1383	0/0:32,0:32:93.31:0,93,1338	0/0:30,0:30:90.28:0,90,1263	1/1:0,22:22:63.20:780,63,0	1/1:1,26:27:78.25:967,78,0	0/0:26,0:26:78.26:0,78,1119	1/1:1,13:14:39.12:482,39,0
chr10	54079821	.	AAAGGAAGG	A	9199.25	PASS	AB=1.000;AC=31;AF=0.554;AN=56;BaseQRankSum=-1.681;DP=653;FS=6.366;HRun=0;HaplotypeScore=202.6990;InbreedingCoeff=0.2321;MQ=52.58;MQ0=8;MQRankSum=1.396;QD=18.22;ReadPosRankSum=-3.503;VQSLOD=3.2181;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:21,2:25:6.88:690,7,0	1/1:7,1:8:15.03:240,15,0	0/0:17,0:13:27.98:0,28,376	0/0:8,0:6:10.60:0,11,206	0/1:36,0:35:56.89:623,0,57	0/1:26,0:25:54.99:55,0,76	0/1:27,0:27:9.90:10,0,226	1/1:16,0:13:36:478,36,0	0/1:24,0:22:7.15:613,0,7	0/1:22,0:22:1.72:2,0,680	0/1:18,0:18:11.10:11,0,178	0/1:28,0:26:31.73:32,0,1138	0/0:27,0:25:60.18:0,60,1358	0/1:25,0:24:42.79:527,0,43	1/1:28,4:32:81.10:1232,81,0	1/1:17,2:18:51.07:693,51,0	0/0:34,0:34:17.64:0,18,209	0/0:26,0:25:10.18:0,10,524	1/1:13,1:14:30.04:431,30,0	1/1:20,4:24:66.10:949,66,0	1/1:14,0:14:29.91:432,30,0	0/1:24,0:22:16.47:16,0,1010	0/1:26,0:25:11.75:12,0,1209	0/0:28,0:27:52.96:0,53,1279	1/1:34,0:31:33.24:589,33,0	0/1:30,0:30:91.69:92,0,543	1/1:26,7:33:87.12:1471,87,0	0/0:8,0:8:10.38:0,10,310
chr10	54079830	.	AAGG	A	1168.91	PASS	AB=0.967;AC=15;AF=0.268;AN=56;BaseQRankSum=3.709;DP=629;FS=14.999;HRun=0;HaplotypeScore=180.2807;InbreedingCoeff=-0.1511;MQ=50.82;MQ0=8;MQRankSum=2.166;QD=3.59;ReadPosRankSum=0.167;VQSLOD=1.5777;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:23:30.97:128,0,31	1/1:5,0:5:6.86:43,7,0	0/0:12,0:9:26.46:0,26,404	0/0:6,0:4:9.50:0,10,194	0/1:35,0:33:59.10:116,0,59	0/0:27,0:26:32.47:0,32,334	0/0:23,0:23:39.11:0,39,523	0/1:19,0:16:46.87:47,0,89	0/1:25,0:23:26.86:99,0,27	0/0:20,0:20:57.06:0,57,967	0/0:15,0:15:40.96:0,41,489	0/1:29,0:27:10.07:10,0,978	0/0:27,0:25:15.50:0,16,987	0/1:23,0:22:50.22:68,0,50	0/1:22,7:29:57.33:199,0,57	0/1:14,4:17:56.27:82,0,56	0/0:33,0:33:45.13:0,45,251	0/0:22,0:21:36.93:0,37,674	0/1:11,0:10:50.13:54,0,50	0/1:26,0:26:83.30:83,0,316	0/1:13,0:13:54.82:55,0,92	0/0:24,0:22:44.67:0,45,812	0/0:26,0:25:71.71:0,72,1071	0/0:31,0:30:77.08:0,77,1178	0/1:35,0:32:1.46:121,0,1	0/0:29,0:29:83.58:0,84,1186	0/1:33,2:35:99:223,0,448	0/0:8,0:8:23.91:0,24,375
chr10	54079859	.	A	AG	527.92	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.938;DP=598;FS=10.965;HRun=1;HaplotypeScore=158.9243;InbreedingCoeff=0.8320;MQ=49.32;MQ0=5;MQRankSum=-7.618;QD=10.15;ReadPosRankSum=2.238;VQSLOD=0.7429;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:54.16:0,54,680	1/1:3,0:3:7.49:46,7,0	0/0:3,0:3:3.01:0,3,39	0/0:2,0:1:2.97:0,3,20	0/0:31,0:29:53.77:0,54,546	0/0:30,0:30:24.06:0,24,284	0/0:23,0:23:24.06:0,24,296	0/0:19,0:16:44.97:0,45,543	0/0:19,0:17:11.99:0,12,137	0/0:25,0:24:64.36:0,64,917	0/0:13,0:13:33.11:0,33,419	0/0:25,0:23:58.77:0,59,692	0/0:24,0:22:58.18:0,58,610	0/0:19,0:18:15:0,15,161	1/1:21,5:26:45.90:330,46,0	1/1:17,6:22:47.22:288,47,0	0/0:29,0:29:18.45:0,18,197	0/0:24,0:23:50.38:0,50,528	0/0:14,0:13:33.54:0,34,376	0/0:25,0:25:75.21:0,75,929	0/0:14,0:13:30.08:0,30,375	0/0:21,0:19:53.75:0,54,585	0/0:29,0:28:74.60:0,75,866	0/0:21,0:20:42.08:0,42,580	0/0:37,0:34:12.03:0,12,139	0/0:23,0:23:69.20:0,69,909	0/0:40,0:40:99:0,114,1433	0/0:14,0:13:36.12:0,36,467
chr10	54079872	.	GA	G	7962.16	PASS	AB=0.975;AC=46;AF=0.821;AN=56;BaseQRankSum=4.420;DP=599;FS=0.000;HRun=4;HaplotypeScore=128.6936;InbreedingCoeff=0.1631;MQ=49.07;MQ0=4;MQRankSum=-1.921;QD=13.75;ReadPosRankSum=-3.623;VQSLOD=2.5884;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,10:15:24.98:275,25,0	1/1:1,2:3:6.02:71,6,0	0/0:10,0:5:12.01:0,12,160	0/0:10,0:5:9.03:0,9,122	1/1:25,0:23:30.04:324,30,0	1/1:29,0:29:5.04:49,5,0	0/1:17,0:17:29.74:30,0,34	1/1:1,15:16:39.11:455,39,0	1/1:23,0:21:6.01:62,6,0	1/1:27,0:27:70.26:815,70,0	1/1:15,0:15:28.85:324,29,0	0/1:22,2:22:46.63:47,0,483	0/1:25,0:23:99:132,0,498	1/1:24,0:23:7.57:69,8,0	1/1:6,20:25:53.31:583,53,0	1/1:8,14:21:45.90:493,46,0	1/1:29,2:31:5.56:93,6,0	1/1:5,17:22:14.11:286,14,0	1/1:1,14:14:42.06:463,42,0	1/1:0,22:22:66.20:791,66,0	1/1:1,14:14:30.56:355,31,0	0/1:20,0:18:18.63:19,0,412	0/1:34,1:34:22.52:23,0,833	0/1:19,1:19:33.81:34,0,501	1/1:35,3:35:2.88:15,3,0	1/1:21,0:21:57.04:666,57,0	1/1:0,37:37:99:1257,105,0	1/1:4,7:10:21.02:232,21,0
chr10	54079873	.	A	AAAG	8506.30	PASS	AB=0.933;AC=46;AF=0.821;AN=56;BaseQRankSum=5.965;DP=602;FS=2.113;HRun=0;HaplotypeScore=145.3566;InbreedingCoeff=0.1765;MQ=49.02;MQ0=4;MQRankSum=-2.015;QD=14.67;ReadPosRankSum=-3.763;VQSLOD=3.6036;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:15:29.33:257,29,0	1/1:3,0:3:5.93:53,6,0	0/0:10,0:5:11.93:0,12,163	0/0:12,0:5:9.03:0,9,125	1/1:21,2:22:31.35:460,31,0	1/1:29,0:29:15.94:244,16,0	0/1:17,0:17:29.50:29,0,35	1/1:16,0:16:42.56:546,43,0	1/1:19,3:21:5.79:119,6,0	1/1:27,0:27:76.26:883,76,0	1/1:15,0:15:33.04:425,33,0	0/1:21,3:22:99:175,0,277	0/1:21,3:22:99:335,0,350	1/1:23,1:23:6.02:101,6,0	1/1:26,0:25:53.53:569,54,0	1/1:22,0:21:47.61:553,48,0	1/1:30,0:31:11.47:205,11,0	1/1:23,0:22:38.63:370,39,0	1/1:16,0:15:41.96:496,42,0	1/1:23,0:23:41.12:453,41,0	1/1:15,0:14:29.28:283,29,0	0/1:19,2:19:79.03:79,0,204	0/1:35,0:34:99:177,0,604	0/1:18,2:19:96.97:97,0,248	1/1:38,0:35:3.01:51,3,0	1/1:21,0:21:58.33:617,58,0	1/1:37,0:37:74.76:671,75,0	1/1:11,0:10:21.06:257,21,0
chr10	54079874	.	A	AAGG	10209.11	PASS	AB=0.907;AC=46;AF=0.821;AN=56;BaseQRankSum=5.104;DP=613;FS=0.958;HRun=0;HaplotypeScore=143.9665;InbreedingCoeff=0.1864;MQ=48.80;MQ0=5;MQRankSum=-2.271;QD=17.30;ReadPosRankSum=-3.502;VQSLOD=4.2633;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:14,1:15:28.39:369,28,0	1/1:2,0:3:6.02:91,6,0	0/0:10,0:5:11.89:0,12,205	0/0:13,0:5:9.03:0,9,158	1/1:5,16:21:30.09:572,30,0	1/1:2,27:30:18.90:374,19,0	0/1:1,16:17:34.42:49,0,34	1/1:19,0:19:46.39:628,46,0	1/1:5,15:21:5.79:118,6,0	1/1:1,26:27:81.23:1488,81,0	1/1:1,14:17:33.11:621,33,0	0/1:24,0:22:94.96:95,0,528	0/1:24,0:22:99:177,0,556	1/1:3,17:22:6.02:139,6,0	1/1:20,0:25:55.12:896,55,0	1/1:15,0:21:48.08:849,48,0	1/1:6,25:31:8.92:187,9,0	1/1:22,0:21:33.07:490,33,0	1/1:16,0:15:13.56:324,14,0	1/1:23,0:23:23.06:226,23,0	1/1:14,0:13:26.94:166,27,0	0/1:20,0:19:19.13:19,0,418	0/1:36,0:36:40.12:40,0,955	0/1:20,0:19:34.38:34,0,476	1/1:8,34:39:9.03:173,9,0	1/1:3,20:23:63.16:1150,63,0	1/1:37,0:37:73.89:493,74,0	1/1:11,0:10:21.07:439,21,0
chr10	54079875	.	AAG	A	509.50	PASS	AB=0.956;AC=14;AF=0.250;AN=56;BaseQRankSum=5.032;DP=603;FS=12.979;HRun=0;HaplotypeScore=161.5259;InbreedingCoeff=-0.1954;MQ=48.64;MQ0=5;MQRankSum=-7.288;QD=1.81;ReadPosRankSum=-5.175;VQSLOD=-0.2411;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:12,3:15:31.92:100,0,32	1/1:3,0:3:2.49:6,2,0	0/0:11,0:5:14.84:0,15,241	0/0:13,0:5:9.03:0,9,183	0/1:21,1:20:43.41:43,0,52	0/0:30,0:30:22.64:0,23,160	0/0:17,0:17:4.83:0,5,51	0/1:19,0:19:5.22:5,0,95	0/0:23,0:21:2.28:0,2,26	0/0:27,0:27:66.68:0,67,314	0/0:16,0:16:30.94:0,31,147	0/1:23,1:22:65.56:66,0,734	0/1:21,3:22:99:182,0,761	0/0:21,0:21:3.02:0,3,18	0/1:26,0:25:5.32:5,0,8	0/1:21,0:20:7.75:8,0,50	0/1:28,0:29:1.66:2,0,28	0/1:20,1:21:34.59:35,0,68	0/0:16,0:15:19.09:0,19,133	0/0:23,0:23:57.54:0,58,235	0/0:14,0:13:19.22:0,19,78	0/1:20,1:19:42.31:42,0,616	0/1:35,1:35:99:100,0,1259	0/1:19,1:19:57.44:57,0,742	0/0:42,0:39:14.80:0,15,99	0/0:22,0:22:47.74:0,48,245	0/0:37,0:37:58.33:0,58,219	0/0:8,0:7:14.76:0,15,54
chr10	54079917	.	GAAGAAAGAAAGA	G	3864.40	PASS	AB=0.829;AC=16;AF=0.308;AN=52;BaseQRankSum=2.426;DP=594;FS=1.323;HRun=0;HaplotypeScore=236.6384;InbreedingCoeff=0.7463;MQ=53.02;MQ0=10;MQRankSum=-8.804;QD=18.94;ReadPosRankSum=2.657;VQSLOD=2.6883;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:51.18:0,51,2057	0/0:10,0:10:18.06:0,18,680	./.	./.	0/1:21,0:18:87.57:349,0,88	0/0:30,0:30:45.15:0,45,2128	0/0:11,0:11:18.06:0,18,658	0/0:23,0:22:11.97:0,12,112	1/1:19,0:19:12.04:312,12,0	0/0:26,0:26:42.14:0,42,1946	0/0:16,0:16:18.06:0,18,788	1/1:12,15:27:15.05:511,15,0	1/1:12,14:26:24.08:818,24,0	1/1:17,0:17:9.03:251,9,0	0/0:24,0:23:33.11:0,33,1485	0/0:24,0:24:36.12:0,36,1433	0/0:22,0:22:18.06:0,18,338	0/0:13,0:12:21.07:0,21,423	0/0:17,0:17:21.06:0,21,482	0/0:30,0:29:45.13:0,45,1041	0/0:10,0:10:6.02:0,6,175	1/1:8,8:16:9.03:305,9,0	1/1:12,11:23:8.70:403,9,0	0/1:12,13:25:71.45:189,0,71	1/1:30,0:30:30.10:727,30,0	0/0:14,0:19:30.09:0,30,901	0/0:40,0:40:63.16:0,63,1673	0/0:12,0:12:15.05:0,15,478
chr10	54079921	.	AAAGAAAG	A	2038.03	PASS	AB=0.984;AC=10;AF=0.179;AN=56;BaseQRankSum=6.997;DP=589;FS=9.392;HRun=0;HaplotypeScore=193.6867;InbreedingCoeff=0.0106;MQ=53.02;MQ0=12;MQRankSum=-8.776;QD=10.14;ReadPosRankSum=0.802;VQSLOD=2.0160;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:60.18:0,60,1837	0/0:12,0:12:29.13:0,29,782	0/0:16,0:6:14.96:0,15,159	0/0:19,0:5:5.46:0,5,48	0/1:23,1:21:99:434,0,279	0/0:27,0:27:45.15:0,45,1697	0/0:13,0:13:27.09:0,27,790	0/0:22,0:21:42.15:0,42,652	1/1:19,0:19:14.24:190,14,0	0/0:25,0:25:72.24:0,72,1908	0/0:17,0:16:42.14:0,42,889	0/1:23,0:23:99:174,0,150	0/1:25,0:25:99:275,0,272	0/1:19,0:19:17.77:225,0,18	0/0:26,0:25:35.37:0,35,1557	0/0:22,0:22:51.17:0,51,1486	0/0:22,0:22:33.02:0,33,417	0/0:14,0:13:36.05:0,36,482	0/0:20,0:19:48.04:0,48,796	0/0:28,0:27:78.26:0,78,1581	0/0:12,0:11:33.10:0,33,510	0/1:14,0:14:93.38:93,0,188	0/1:21,0:21:99:122,0,287	0/1:24,0:24:48.41:48,0,313	0/1:29,3:32:59.64:625,0,60	0/0:19,0:19:54.08:0,54,789	0/0:39,0:39:99:0,111,2538	0/0:13,0:13:39.13:0,39,763
chr10	54079948	.	GAAAGAAAGAAAGAAA	G	3594.40	PASS	AB=0.950;AC=10;AF=0.179;AN=56;BaseQRankSum=7.886;DP=581;FS=9.714;HRun=0;HaplotypeScore=253.6122;InbreedingCoeff=-0.0220;MQ=50.09;MQ0=10;MQRankSum=-7.563;QD=19.12;ReadPosRankSum=5.764;VQSLOD=0.5615;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:85.28:0,85,2991	0/0:19,0:19:31.54:0,32,1204	0/0:9,0:1:3.01:0,3,39	0/0:15,0:3:3.01:0,3,39	0/1:21,4:23:99:862,0,286	0/0:29,0:29:84.28:0,84,3807	0/0:20,0:20:51.17:0,51,1744	0/0:28,0:27:75.67:0,76,1360	1/1:16,2:17:22.11:604,22,0	0/0:25,0:25:75.24:0,75,3590	0/0:19,0:18:51.09:0,51,1823	0/1:21,0:20:99:113,0,176	0/1:22,0:21:99:187,0,267	0/1:18,3:21:36.10:453,0,36	0/0:26,0:25:68.04:0,68,2453	0/0:22,0:21:50.49:0,50,2105	0/0:19,0:19:41.17:0,41,840	0/0:15,0:14:41.30:0,41,1050	0/0:24,0:18:51.91:0,52,1177	0/0:25,0:24:71.36:0,71,2150	0/0:8,0:7:1.44:0,1,476	0/1:13,0:13:57.20:57,0,251	0/1:16,0:16:83.15:83,0,267	0/1:26,0:26:21.25:21,0,492	0/1:22,4:26:23.54:1213,0,24	0/0:17,0:17:51.17:0,51,1801	0/0:34,0:34:99:0,100,3048	0/0:8,0:8:24.05:0,24,956
chr10	54079963	.	A	AGAAG	5747.03	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=-0.927;DP=607;FS=2.411;HRun=0;HaplotypeScore=141.9610;InbreedingCoeff=0.5949;MQ=52.55;MQ0=11;MQRankSum=0.610;QD=19.16;ReadPosRankSum=3.557;VQSLOD=4.8861;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:32,0:32:99:271,0,201	1/1:0,19:19:35.74:550,36,0	0/0:22,0:4:7.83:0,8,70	0/0:30,0:8:11.96:0,12,112	1/1:28,0:26:49.87:519,50,0	0/0:31,0:31:93.03:0,93,1158	0/0:21,0:21:53.99:0,54,591	0/0:26,0:26:63.66:0,64,509	1/1:12,0:11:21.78:205,22,0	0/0:26,0:26:75.06:0,75,1022	0/0:14,0:13:38.99:0,39,450	0/0:23,0:22:35.67:0,36,324	0/0:25,0:24:50.55:0,51,424	1/1:11,0:11:14.80:182,15,0	0/1:32,0:32:99:354,0,120	1/1:10,10:19:53.97:1084,54,0	1/1:21,0:21:29.07:285,29,0	0/1:17,0:16:45.62:143,0,46	1/1:20,0:15:2.35:342,2,0	0/1:27,0:26:66.81:493,0,67	0/1:7,0:6:4.73:118,0,5	0/0:18,0:18:33.55:0,34,276	0/0:15,0:15:23.68:0,24,164	0/0:26,0:26:9.02:0,9,203	1/1:22,0:22:45.19:460,45,0	0/0:17,0:17:51.04:0,51,562	1/1:32,0:32:15.80:739,16,0	0/0:11,0:11:32.97:0,33,372
chr10	54080880	.	CT	C	1098.46	PASS	AB=0.696;AC=18;AF=0.333;AN=54;BaseQRankSum=6.600;DP=355;FS=0.872;HRun=14;HaplotypeScore=44.8945;InbreedingCoeff=0.3087;MQ=65.38;MQ0=7;MQRankSum=3.088;QD=6.58;ReadPosRankSum=2.001;VQSLOD=1.8607;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:9,12:21:34.11:184,0,34	0/0:7,0:7:21.02:0,21,195	0/0:12,0:9:4.24:0,4,66	./.	0/1:6,6:12:57.04:96,0,57	0/0:14,0:15:25.90:0,26,240	0/0:11,0:11:18.02:0,18,167	0/1:6,0:10:10.25:14,0,10	1/1:1,6:6:17.86:123,18,0	0/0:19,1:20:21.31:0,21,312	0/0:9,0:9:24.03:0,24,223	0/0:17,0:22:44.20:0,44,343	0/0:14,0:14:27.78:0,28,227	0/1:6,9:15:25.93:135,0,26	0/0:9,1:10:0.40:0,0,138	0/0:11,1:12:9.45:0,9,230	1/1:2,0:20:34.40:99,34,0	1/1:1,0:14:18.33:53,18,0	0/1:7,6:14:54.28:98,0,54	1/1:1,12:13:35.69:246,36,0	1/1:5,7:15:20.91:120,21,0	0/1:7,1:9:2.73:3,0,108	0/0:10,0:10:21.02:0,21,195	0/0:15,0:14:29.82:0,30,256	0/1:5,4:9:13.01:67,0,13	0/0:8,0:8:11.85:0,12,98	0/1:4,2:8:14.87:40,0,15	0/0:15,0:13:33:0,33,299
chr10	54081496	.	C	CG	947.73	PASS	AB=0.881;AC=33;AF=0.660;AN=50;BaseQRankSum=-1.313;DP=192;FS=2.768;HRun=8;HaplotypeScore=33.5137;InbreedingCoeff=0.5323;MQ=92.70;MQ0=0;MQRankSum=-0.668;QD=7.35;ReadPosRankSum=-3.234;VQSLOD=-0.6801;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,0:6:0.89:3,1,0	./.	0/1:12,0:12:6.76:7,0,111	0/1:19,0:15:1.74:2,0,77	1/1:5,0:5:2.97:20,3,0	1/1:0,7:7:9.03:104,9,0	1/1:1,7:8:12.04:138,12,0	1/1:4,1:5:8.12:56,8,0	1/1:3,0:7:2.84:15,3,0	1/1:4,3:7:9.03:102,9,0	1/1:1,3:4:9.03:104,9,0	0/0:6,0:7:14.04:0,14,115	0/0:6,0:6:12:0,12,110	1/1:7,0:7:2.37:9,2,0	1/1:0,5:5:3.01:35,3,0	1/1:0,8:8:18.05:208,18,0	0/0:15,0:15:32.53:0,33,301	0/0:13,0:13:36.02:0,36,328	1/1:3,0:6:8.66:50,9,0	./.	1/1:4,0:4:2.74:12,3,0	0/0:4,0:4:9:0,9,82	0/0:6,0:6:15.01:0,15,136	0/0:8,0:8:20.98:0,21,185	./.	0/1:4,5:9:9.39:155,0,9	1/1:6,0:6:4.61:30,5,0	1/1:0,4:4:6.02:69,6,0
chr10	54081803	.	T	TC	1504.85	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=5.939;DP=418;FS=1.919;HRun=9;HaplotypeScore=54.3041;InbreedingCoeff=0.6628;MQ=84.55;MQ0=0;MQRankSum=-0.442;QD=9.07;ReadPosRankSum=-0.098;VQSLOD=1.5797;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:44.97:0,45,387	0/0:6,0:6:11.99:0,12,104	0/0:25,0:22:15.39:0,15,150	0/1:12,0:11:11.15:11,0,20	1/1:1,16:17:39.67:487,40,0	0/1:20,0:20:49.84:90,0,50	1/1:14,0:14:3.49:68,3,0	0/0:19,1:21:35.06:0,35,309	1/1:2,14:16:24.06:265,24,0	0/1:18,0:18:43.43:52,0,43	1/1:13,0:13:6.21:75,6,0	0/0:21,0:21:44.93:0,45,377	0/0:15,0:15:29.93:0,30,254	1/1:2,8:10:26.28:271,26,0	0/0:10,0:10:26.97:0,27,229	0/0:12,0:12:35.99:0,36,310	0/0:16,0:16:35.97:0,36,309	0/0:11,0:11:29.98:0,30,256	0/0:11,0:11:20.99:0,21,182	0/0:19,0:19:50.94:0,51,434	0/0:10,0:10:23.95:0,24,199	0/0:9,0:9:20.98:0,21,179	0/0:15,0:15:27.06:0,27,323	0/0:8,0:8:20.99:0,21,182	1/1:3,9:12:2.04:180,2,0	1/1:23,0:23:7.56:120,8,0	0/0:26,0:26:65.96:0,66,571	1/1:11,0:11:14.91:77,15,0
chr10	54081812	.	C	CA	2621.17	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=-1.294;DP=395;FS=0.877;HRun=7;HaplotypeScore=47.8748;InbreedingCoeff=0.7609;MQ=81.18;MQ0=0;MQRankSum=-2.302;QD=16.49;ReadPosRankSum=0.952;VQSLOD=3.1281;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:42.06:0,42,405	0/0:6,0:6:15:0,15,139	0/0:22,0:19:8.27:0,8,209	0/1:10,0:9:3.33:3,0,52	1/1:17,0:17:9.98:114,10,0	1/1:5,14:20:15.08:390,15,0	1/1:1,11:12:27:302,27,0	0/0:23,0:23:56.91:0,57,506	0/1:16,0:16:0.89:55,0,1	1/1:4,13:17:39.10:451,39,0	1/1:1,11:12:30.09:356,30,0	0/0:16,0:16:33.04:0,33,318	0/0:10,0:10:27.04:0,27,260	1/1:10,1:11:1.73:75,2,0	0/0:9,0:9:21.03:0,21,203	0/0:14,0:14:39:0,39,362	0/0:18,0:18:42.01:0,42,388	0/0:11,0:11:26.91:0,27,260	0/0:9,0:9:27.03:0,27,254	0/0:20,0:20:48.05:0,48,456	0/0:8,0:8:15.02:0,15,145	0/0:7,0:7:18.03:0,18,174	0/0:17,0:17:45:0,45,418	0/0:7,0:7:21.03:0,21,202	0/1:11,0:11:29.57:30,0,30	1/1:3,19:23:63.16:723,63,0	0/0:22,0:22:63.10:0,63,608	1/1:0,10:10:27.08:320,27,0
chr10	54082082	.	TAA	T	6113.61	PASS	AB=0.644;AC=33;AF=0.589;AN=56;BaseQRankSum=-3.110;DP=451;FS=1.266;HRun=12;HaplotypeScore=67.3645;InbreedingCoeff=0.7764;MQ=77.12;MQ0=1;MQRankSum=0.540;QD=20.87;ReadPosRankSum=4.540;VQSLOD=4.3297;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,11:12:24.05:244,24,0	0/1:1,1:9:15.03:15,0,28	0/0:15,0:13:20.53:0,21,222	0/1:12,1:12:17.87:18,0,203	1/1:2,21:23:47.98:484,48,0	1/1:1,19:21:47.83:540,48,0	1/1:1,14:15:42.09:427,42,0	0/0:3,0:20:40.11:0,40,167	1/1:3,12:15:33.07:335,33,0	1/1:2,14:16:42.08:427,42,0	1/1:2,12:15:26.77:327,27,0	0/0:14,0:14:30.10:0,30,447	0/0:16,0:16:42.13:0,42,604	1/1:2,10:12:21.04:214,21,0	0/0:1,0:18:39.93:0,40,140	0/1:2,3:19:46.57:47,0,130	0/0:3,0:20:34.93:0,35,123	0/0:2,0:15:17.38:0,17,90	1/1:1,18:19:54.11:549,54,0	1/1:1,13:14:39.09:397,39,0	1/1:2,11:13:33.07:336,33,0	0/0:12,0:12:27.09:0,27,403	0/0:18,0:18:42.13:0,42,604	0/0:9,0:9:24.08:0,24,358	1/1:2,12:16:29.53:339,30,0	1/1:4,20:24:60.12:610,60,0	1/1:2,25:27:65.88:653,66,0	1/1:3,5:8:15.01:153,15,0
chr10	54082456	.	CTTA	C	9339.75	PASS	AB=0.750;AC=37;AF=0.661;AN=56;BaseQRankSum=8.494;DP=414;FS=1.256;HRun=0;HaplotypeScore=64.5773;InbreedingCoeff=0.8596;MQ=62.77;MQ0=0;MQRankSum=-1.044;QD=27.55;ReadPosRankSum=1.191;VQSLOD=4.6797;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,17:20:23.28:555,23,0	1/1:2,8:10:24.08:344,24,0	0/0:3,0:2:3.01:0,3,45	0/0:2,0:2:5.75:0,6,64	1/1:9,14:23:36.05:484,36,0	1/1:2,11:13:30.10:430,30,0	1/1:4,4:8:6.02:86,6,0	1/1:19,20:39:60.15:787,60,0	1/1:5,13:18:39.13:559,39,0	1/1:6,15:21:45.13:624,45,0	1/1:4,14:18:33.11:473,33,0	0/0:9,0:9:18.05:0,18,332	0/0:9,0:9:12.04:0,12,244	1/1:1,9:10:26.95:337,27,0	1/1:4,13:17:39.13:558,39,0	1/1:3,10:13:27.09:387,27,0	0/0:12,0:12:30.10:0,30,597	0/0:18,0:18:42.13:0,42,774	1/1:4,10:14:30.10:429,30,0	1/1:9,18:27:48.16:681,48,0	0/1:4,2:6:0:0,0,0	0/0:3,0:3:3.01:0,3,61	0/0:16,0:16:18.05:0,18,319	0/0:3,0:3:6.02:0,6,121	1/1:3,16:19:39.13:559,39,0	1/1:6,20:26:60.18:835,60,0	1/1:2,15:17:45.08:619,45,0	1/1:2,18:20:44.98:595,45,0
chr10	54085579	.	CCCAGA	C	4025.26	PASS	AB=0.670;AC=23;AF=0.426;AN=54;BaseQRankSum=6.376;DP=830;FS=2.236;HRun=0;HaplotypeScore=191.6053;InbreedingCoeff=0.4088;MQ=66.32;MQ0=13;MQRankSum=-3.342;QD=9.94;ReadPosRankSum=-2.449;VQSLOD=2.6491;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:27,17:44:24.08:427,24,0	0/0:12,0:12:21.07:0,21,532	0/0:53,0:23:4.81:0,5,77	0/0:76,0:27:8.99:0,9,97	0/0:9,0:22:8.73:0,9,58	0/1:8,0:19:3.06:88,0,3	0/0:28,0:28:0.51:0,1,11	./.	0/1:7,0:16:17.63:18,0,54	0/1:13,0:23:34.26:57,0,34	0/1:9,0:18:4.10:91,0,4	0/0:32,0:32:54.19:0,54,1406	0/0:25,0:25:30.10:0,30,729	0/1:14,0:28:13.59:131,0,14	0/0:25,0:25:36.12:0,36,945	0/0:32,0:32:69.22:0,69,1761	1/1:15,26:40:57.20:1014,57,0	1/1:22,18:39:47.14:951,47,0	1/1:15,5:19:15.05:249,15,0	1/1:11,8:19:18.02:287,18,0	1/1:37,18:55:6.02:107,6,0	0/0:23,0:23:36.12:0,36,859	0/0:17,0:17:15.05:0,15,377	0/0:57,0:57:99:0,108,2672	0/1:14,0:24:20.25:58,0,20	0/1:17,0:32:27.79:193,0,28	1/1:16,7:23:18.06:320,18,0	1/1:2,0:3:3.01:35,3,0
chr10	54089730	.	TA	T	11875.66	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=6.351;DP=588;FS=2.572;HRun=1;HaplotypeScore=65.9569;InbreedingCoeff=0.9998;MQ=84.92;MQ0=0;MQRankSum=-2.425;QD=37.34;ReadPosRankSum=4.637;VQSLOD=5.3727;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,27:27:66.22:921,66,0	0/0:10,0:10:29.21:0,29,179	0/0:23,0:23:69.22:0,69,967	0/0:15,0:15:44.97:0,45,600	1/1:0,18:18:54.14:732,54,0	1/1:0,20:20:51.17:712,51,0	1/1:0,18:18:39.09:523,39,0	0/0:47,0:47:99:0,141,1953	1/1:0,20:20:54.18:749,54,0	1/1:0,33:33:99:1333,99,0	1/1:0,25:25:75.21:1024,75,0	0/0:17,0:17:51.16:0,51,720	0/0:24,0:24:72.19:0,72,990	1/1:0,20:20:51.17:712,51,0	0/0:24,0:24:69.63:0,70,400	0/0:16,0:16:46.66:0,47,311	0/0:23,0:23:69.20:0,69,966	0/0:20,0:20:57.19:0,57,833	1/1:0,18:18:53.82:686,54,0	1/1:0,17:17:48.08:627,48,0	1/1:0,26:26:66.22:921,66,0	0/0:16,0:16:45.11:0,45,601	0/0:20,0:20:60.18:0,60,839	0/0:15,0:15:45.13:0,45,638	1/1:0,23:23:63.21:880,63,0	1/1:0,20:20:60.17:803,60,0	1/1:0,23:23:60.20:836,60,0	1/1:0,10:10:30.10:418,30,0
chr10	54089731	.	A	AT	1526.47	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=-5.135;DP=588;FS=1.147;HRun=6;HaplotypeScore=102.9161;InbreedingCoeff=0.7807;MQ=84.76;MQ0=0;MQRankSum=-2.887;QD=22.12;ReadPosRankSum=-0.166;VQSLOD=2.2479;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:29.03:0,29,78	1/1:3,8:11:24.08:302,24,0	0/0:22,0:22:60.13:0,60,610	0/0:15,0:15:42.08:0,42,420	0/0:18,0:18:26.43:0,26,68	0/0:21,0:21:26.12:0,26,67	0/0:18,0:18:1.78:0,2,28	0/0:46,0:46:99:0,120,1224	0/0:20,0:20:28.25:0,28,73	0/0:33,0:33:41.63:0,42,111	0/0:26,0:26:35.69:0,36,94	0/0:17,0:17:45.10:0,45,458	0/0:24,0:24:66.14:0,66,672	0/0:20,0:20:26.43:0,26,68	1/1:2,23:25:66.21:830,66,0	1/1:2,14:16:42.13:528,42,0	0/0:24,0:24:60.13:0,60,612	0/0:20,0:20:57.13:0,57,581	0/0:18,0:18:18.16:0,18,50	0/1:17,0:17:12.97:13,0,28	0/0:27,0:27:34.20:0,34,88	0/0:14,0:14:36.08:0,36,367	0/0:18,0:18:54.11:0,54,544	0/0:15,0:15:42.09:0,42,428	0/0:23,0:23:32.65:0,33,84	0/0:20,0:20:27.94:0,28,72	0/0:23,0:23:31.36:0,31,82	0/0:10,0:10:15.55:0,16,40
chr10	54091384	.	G	GA	9567.13	PASS	AB=1.000;AC=31;AF=0.554;AN=56;BaseQRankSum=-15.002;DP=731;FS=20.469;HRun=8;HaplotypeScore=70.2293;InbreedingCoeff=0.9272;MQ=66.71;MQ0=5;MQRankSum=1.504;QD=24.59;ReadPosRankSum=1.184;VQSLOD=3.4107;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,27:30:69.21:796,69,0	0/0:16,0:16:48.03:0,48,439	0/0:38,0:21:35.75:0,36,317	0/1:29,0:17:23.38:23,0,165	1/1:3,26:30:65.99:726,66,0	1/1:2,23:25:63.19:727,63,0	1/1:4,27:31:72.21:831,72,0	0/0:5,0:35:49.39:0,49,149	1/1:2,14:16:36.11:415,36,0	1/1:7,26:33:78.23:896,78,0	1/1:3,12:15:30.01:317,30,0	0/0:21,0:21:54.03:0,54,494	0/0:21,0:21:54.02:0,54,494	1/1:1,20:22:57:636,57,0	0/0:29,0:29:81.04:0,81,741	0/0:25,0:25:66.03:0,66,604	0/0:43,0:43:99:0,105,956	0/0:31,0:32:77.06:0,77,692	1/1:6,11:18:35.88:384,36,0	1/1:2,27:30:78.23:899,78,0	1/1:2,12:14:27.08:311,27,0	0/0:19,0:19:48:0,48,439	0/0:32,0:32:93.01:0,93,841	0/0:31,0:31:78.02:0,78,713	1/1:4,21:25:60.18:693,60,0	1/1:5,26:31:80.97:909,81,0	1/1:5,25:31:66.20:762,66,0	1/1:1,8:9:21.06:242,21,0
chr10	54091925	.	A	AGC	917.04	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=5.899;DP=490;FS=17.261;HRun=0;HaplotypeScore=159.1605;InbreedingCoeff=0.7842;MQ=63.86;MQ0=2;MQRankSum=-5.621;QD=8.19;ReadPosRankSum=4.221;VQSLOD=2.4521;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:24:6.98:0,7,52	0/0:9,0:9:6.12:0,6,66	0/0:21,0:14:5.29:0,5,193	0/0:19,0:10:17.33:0,17,193	0/0:18,0:18:2.94:0,3,18	1/1:6,4:10:17.84:101,18,0	1/1:22,6:28:23.09:192,23,0	0/0:17,0:17:17.94:0,18,205	0/0:24,0:24:23.48:0,23,142	1/1:13,4:16:24.20:236,24,0	1/1:6,4:10:10.75:52,11,0	0/0:16,0:16:36.11:0,36,462	0/0:23,0:23:36.05:0,36,426	0/0:17,0:17:13.83:0,14,84	0/0:22,0:22:17.67:0,18,123	0/0:22,0:22:17.28:0,17,145	0/0:15,0:15:10:0,10,97	0/0:8,0:7:8.09:0,8,33	0/0:19,0:18:22.28:0,22,156	0/0:10,0:10:0.55:0,1,29	1/1:21,0:21:2.21:8,2,0	0/0:10,0:9:9.03:0,9,120	0/0:12,0:12:27.07:0,27,334	0/0:22,0:22:42.03:0,42,578	0/0:21,0:21:11.46:0,11,73	1/1:12,1:13:23.05:152,23,0	0/0:26,0:26:14.05:0,14,157	1/1:10,3:13:38.68:358,39,0
chr10	54091930	.	GCTCCCCCCCCC	G	7163.97	PASS	AB=0.913;AC=26;AF=0.464;AN=56;BaseQRankSum=6.603;DP=445;FS=25.381;HRun=0;HaplotypeScore=171.2929;InbreedingCoeff=0.0874;MQ=61.60;MQ0=6;MQRankSum=-7.732;QD=23.11;ReadPosRankSum=6.953;VQSLOD=2.0579;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:21,0:20:14.43:260,0,14	0/1:7,0:7:37.15:288,0,37	0/0:24,0:13:26.06:0,26,632	0/0:20,0:9:21.06:0,21,574	1/1:16,0:16:3.01:78,3,0	1/1:5,3:9:21.07:640,21,0	1/1:19,5:25:14.02:593,14,0	0/0:12,0:12:23.92:0,24,603	1/1:24,0:23:24.67:622,25,0	0/1:9,8:16:99:606,0,150	1/1:9,1:10:12.51:382,13,0	0/0:16,0:15:36.12:0,36,1582	0/0:15,0:15:36.10:0,36,1203	0/1:16,0:16:9.42:300,0,9	0/1:20,0:20:52.56:216,0,53	0/1:20,0:20:82.68:633,0,83	0/1:14,0:14:78.99:79,0,114	0/0:7,0:6:8.99:0,9,78	0/1:16,0:15:47.22:262,0,47	0/1:10,0:10:40.68:147,0,41	1/1:20,0:20:3.48:78,3,0	0/0:7,0:6:9.03:0,9,259	0/0:9,0:9:27.08:0,27,889	0/0:24,0:23:58.09:0,58,2284	1/1:19,0:19:12.04:312,12,0	0/1:4,4:10:8.50:483,0,9	0/1:22,0:22:99:503,0,157	0/1:6,2:13:10.27:683,0,10
chr10	54091932	.	TCCCCCCCCCCC	T	8455.74	PASS	AB=0.821;AC=30;AF=0.536;AN=56;BaseQRankSum=5.157;DP=413;FS=22.190;HRun=12;HaplotypeScore=156.2955;InbreedingCoeff=0.3674;MQ=58.53;MQ0=9;MQRankSum=-6.104;QD=29.57;ReadPosRankSum=5.500;VQSLOD=0.8699;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:18,3:20:6.04:368,6,0	0/1:2,5:8:0.35:356,0,0	0/0:22,0:11:21.75:0,22,551	0/0:20,0:8:21.04:0,21,540	1/1:9,6:15:3.01:96,3,0	1/1:8,0:8:21.07:640,21,0	1/1:15,0:15:14.02:594,14,0	0/0:13,0:13:31.92:0,32,599	1/1:19,6:23:24.51:764,25,0	0/1:14,0:13:99:606,0,149	1/1:8,0:7:12.51:382,13,0	0/0:15,0:15:39.19:0,39,1393	0/0:12,0:12:33.09:0,33,1095	1/1:12,4:16:12.51:387,13,0	1/1:16,3:18:8.33:288,8,0	0/1:13,5:20:46.42:795,0,46	0/1:11,2:14:36.02:141,0,36	0/0:5,1:6:5.38:0,5,18	1/1:4,10:13:32.97:539,33,0	0/1:6,4:10:22.74:184,0,23	1/1:14,3:17:3.48:96,3,0	0/0:5,0:4:9.01:0,9,199	0/0:9,0:9:26.44:0,26,763	0/0:23,0:22:55.13:0,55,2152	1/1:14,5:19:12.04:386,12,0	0/1:8,0:8:8.35:486,0,8	0/1:14,5:21:75.36:663,0,75	0/1:13,0:13:9.10:685,0,9
chr10	54091933	.	C	CTCTCTCTCTCT	9990.56	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=6.616;DP=379;FS=28.507;HRun=0;HaplotypeScore=146.3534;InbreedingCoeff=0.8662;MQ=60.31;MQ0=9;MQRankSum=-8.985;QD=38.72;ReadPosRankSum=9.464;VQSLOD=2.0974;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:3,12:18:20.80:510,21,0	1/1:6,0:7:14.93:315,15,0	0/0:22,0:11:20.53:0,21,359	0/0:20,0:8:21.06:0,21,512	1/1:6,6:14:3.01:99,3,0	1/1:4,0:8:21.07:506,21,0	1/1:7,0:15:23.27:642,23,0	0/0:13,0:13:28.62:0,29,443	1/1:8,7:18:23.96:677,24,0	1/1:8,0:13:36.12:1155,36,0	1/1:3,0:7:12.04:341,12,0	0/0:17,0:16:36.59:0,37,1182	0/0:12,0:12:31.89:0,32,830	1/1:5,8:15:11.63:320,12,0	1/1:4,0:13:8.82:276,9,0	1/1:7,0:18:33.11:996,33,0	1/1:5,0:9:6.37:156,6,0	1/1:2,0:4:9.03:123,9,0	1/1:11,0:11:27.01:494,27,0	1/1:4,5:9:7.95:317,8,0	1/1:3,11:15:3:116,3,0	0/0:5,0:4:9.03:0,9,198	0/0:10,0:10:26.44:0,26,717	0/0:22,0:21:52.36:0,52,1492	1/1:5,9:16:12.04:392,12,0	1/1:6,0:7:21.07:599,21,0	1/1:7,9:19:30.08:889,30,0	1/1:10,0:13:39.13:1070,39,0
chr10	54092840	.	A	AAACCCATG	20814.14	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=0.950;DP=471;FS=23.095;HRun=0;HaplotypeScore=128.0913;InbreedingCoeff=0.9283;MQ=71.02;MQ0=2;MQRankSum=-13.509;QD=66.71;ReadPosRankSum=2.915;VQSLOD=3.2725;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:28:24.05:891,24,0	1/1:0,9:10:27.09:1188,27,0	0/0:32,0:21:16.04:0,16,745	0/0:12,0:11:17.04:0,17,313	1/1:18,1:20:30.10:1212,30,0	1/1:15,0:15:18.06:738,18,0	1/1:21,0:21:27.09:716,27,0	0/0:39,0:39:99:0,104,2689	1/1:6,9:15:29.58:1309,30,0	1/1:11,8:19:41.67:1648,42,0	1/1:15,0:15:6.02:246,6,0	0/0:12,0:12:30.09:0,30,775	0/0:16,0:16:42.13:0,42,1153	1/1:15,0:15:21.07:535,21,0	1/1:13,12:28:72.24:2835,72,0	1/1:9,8:16:51.16:1860,51,0	1/1:14,1:15:21.07:828,21,0	1/1:3,5:9:21.07:903,21,0	1/1:15,2:17:35.84:1390,36,0	1/1:5,7:12:17.96:996,18,0	1/1:1,2:3:9.03:386,9,0	0/0:11,0:11:30.10:0,30,786	0/0:24,0:24:69.23:0,69,1850	0/0:13,0:13:29.67:0,30,877	1/1:13,0:13:10.73:442,11,0	1/1:10,10:20:47.81:1884,48,0	1/1:14,0:14:21.04:680,21,0	1/1:6,0:6:3.01:126,3,0
chr10	54092841	.	A	AACCCATGATTTTT	20230.58	PASS	AB=1.000;AC=41;AF=0.732;AN=56;BaseQRankSum=1.153;DP=499;FS=17.870;HRun=0;HaplotypeScore=176.4384;InbreedingCoeff=0.8847;MQ=70.67;MQ0=2;MQRankSum=-12.883;QD=54.68;ReadPosRankSum=0.298;VQSLOD=3.3001;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:9,0:34:32.75:1019,33,0	1/1:10,0:10:27.09:1023,27,0	0/1:31,0:19:3.84:4,0,796	0/0:13,0:12:16.47:0,16,323	1/1:11,0:26:49.05:1416,49,0	1/1:3,8:16:12.04:559,12,0	1/1:4,0:19:10.59:271,11,0	0/0:25,0:38:99:0,102,2968	1/1:17,0:17:51.08:1639,51,0	1/1:21,0:21:54.16:1865,54,0	1/1:5,12:18:18.06:561,18,0	0/0:11,0:12:27.17:0,27,837	0/0:18,0:19:41.41:0,41,1216	1/1:9,0:23:23.36:560,23,0	1/1:26,0:26:69.21:2371,69,0	1/1:13,0:13:20.76:1219,21,0	1/1:4,0:14:12.04:455,12,0	1/1:11,0:12:33.11:1307,33,0	1/1:11,0:11:27.06:692,27,0	1/1:15,0:15:36.07:1276,36,0	1/1:5,0:4:12.01:326,12,0	0/0:9,0:11:29.27:0,29,888	0/0:19,0:24:58.54:0,59,2118	0/0:12,0:12:29.91:0,30,1048	1/1:2,0:18:10.32:447,10,0	1/1:15,0:15:42.14:1599,42,0	1/1:9,0:20:30.10:1295,30,0	1/1:2,4:5:6.02:326,6,0
chr10	54092842	.	T	TGA	1931.90	PASS	AB=0.997;AC=26;AF=0.464;AN=56;BaseQRankSum=9.059;DP=504;FS=7.611;HRun=0;HaplotypeScore=174.1441;InbreedingCoeff=0.0094;MQ=70.37;MQ0=2;MQRankSum=-12.355;QD=5.68;ReadPosRankSum=8.823;VQSLOD=1.0909;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:32,0:32:31.35:67,0,31	1/1:9,1:10:26.12:198,26,0	0/0:31,0:18:28.99:0,29,384	0/0:13,0:13:12.87:0,13,150	0/1:25,1:26:46.03:128,0,46	0/1:16,0:16:11.15:19,0,11	0/1:18,0:18:9.91:40,0,10	0/0:39,0:39:99:0,105,1385	0/1:17,0:17:33.04:173,0,33	0/1:21,0:21:56.80:235,0,57	0/1:19,0:19:5.48:5,0,65	0/0:12,0:12:33.95:0,34,432	0/0:19,0:19:45.10:0,45,638	0/1:22,0:22:17.83:18,0,55	1/1:24,2:26:16.42:336,16,0	1/1:14,0:14:29.60:241,30,0	1/1:15,0:15:11.60:80,12,0	1/1:12,0:12:14.13:156,14,0	0/1:11,0:11:12.98:13,0,77	0/1:16,0:16:48.38:131,0,48	0/1:5,0:4:8.63:9,0,48	0/0:12,0:12:33.05:0,33,454	0/0:24,0:24:72.02:0,72,1012	0/0:13,0:13:33.09:0,33,502	0/1:18,0:18:8.38:49,0,8	0/1:15,0:15:30.46:178,0,30	0/1:21,0:21:22.02:22,0,54	1/1:6,0:5:3.76:17,4,0
chr10	54093977	.	C	CG	19899.68	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=10.813;DP=679;FS=13.473;HRun=1;HaplotypeScore=101.6037;InbreedingCoeff=0.9943;MQ=89.02;MQ0=0;MQRankSum=-7.154;QD=38.64;ReadPosRankSum=2.987;VQSLOD=3.8603;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,49:51:99:1897,129,0	1/1:0,10:10:30.10:448,30,0	0/0:23,0:23:63.15:0,63,761	0/0:29,0:29:81.56:0,82,974	1/1:2,25:27:75.25:1109,75,0	1/1:0,22:22:48.16:718,48,0	1/1:0,22:22:51.17:764,51,0	1/1:1,31:32:90.27:1307,90,0	1/1:2,19:21:47.92:717,48,0	1/1:2,25:27:66.20:966,66,0	1/1:0,15:16:42.14:628,42,0	0/0:27,0:27:78.22:0,78,979	0/0:17,0:17:51.12:0,51,643	1/1:1,27:28:75.25:1119,75,0	1/1:0,30:30:87.29:1300,87,0	1/1:2,29:31:81.27:1213,81,0	1/1:0,31:31:84.28:1258,84,0	1/1:0,23:23:60.20:898,60,0	1/1:0,15:15:45.10:629,45,0	1/1:1,18:19:42.14:628,42,0	1/1:1,40:41:99:1616,108,0	0/0:25,0:25:72.22:0,72,919	0/0:13,0:13:36.12:0,36,465	0/0:30,0:30:90.29:0,90,1166	1/1:2,14:16:36.12:539,36,0	1/1:0,25:25:72.22:1051,72,0	1/1:0,24:24:63.17:916,63,0	1/1:0,4:4:12.04:180,12,0
chr10	54094125	.	T	TTTTCCAATTGGATCCAA	12611.73	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-2.344;DP=640;FS=13.812;HRun=0;HaplotypeScore=263.8547;InbreedingCoeff=0.9642;MQ=69.91;MQ0=0;MQRankSum=-10.161;QD=100.09;ReadPosRankSum=-1.037;VQSLOD=3.2113;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:12,5:36:42.14:2648,42,0	0/0:6,0:6:18.06:0,18,893	0/0:12,0:12:26.37:0,26,469	0/0:10,0:10:5.53:0,6,248	0/0:16,0:16:42.12:0,42,1627	0/0:25,0:25:75.25:0,75,2965	0/0:20,0:20:54.18:0,54,2415	0/0:32,0:32:90.30:0,90,3635	0/0:27,0:27:75.26:0,75,3462	0/0:13,0:13:39.13:0,39,1626	0/0:14,0:14:42.13:0,42,1836	0/0:32,0:32:93.27:0,93,4098	0/0:27,0:27:75.26:0,75,3053	0/0:29,0:29:81.28:0,81,3120	0/0:29,0:29:78.25:0,78,3397	0/0:37,0:37:99:0,102,4330	0/0:41,0:41:99:0,123,5049	0/0:23,0:23:69.20:0,69,2826	1/1:9,7:27:81.25:3814,81,0	1/1:6,1:15:15.04:882,15,0	1/1:3,3:18:15.05:831,15,0	0/0:27,0:27:72.23:0,72,2850	0/0:16,0:16:48.16:0,48,1675	0/0:22,0:22:66.21:0,66,2871	0/0:24,0:24:63.21:0,63,2853	0/0:22,0:22:63.21:0,63,2332	1/1:6,12:30:57.19:4436,57,0	0/0:10,0:10:30.10:0,30,1362
chr10	54094453	.	G	GGTGCCC	832.30	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-1.263;DP=697;FS=8.083;HRun=0;HaplotypeScore=150.1893;InbreedingCoeff=0.9960;MQ=87.02;MQ0=0;MQRankSum=-3.992;QD=29.73;ReadPosRankSum=-3.917;VQSLOD=2.1983;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,126,2647	0/0:13,0:13:24.08:0,24,515	0/0:28,0:28:41.35:0,41,826	0/0:19,0:19:27.09:0,27,498	0/0:24,0:24:42.14:0,42,912	0/0:15,0:15:42.14:0,42,892	0/0:28,0:28:69.21:0,69,1392	1/1:20,7:28:36.10:927,36,0	0/0:29,0:29:72.25:0,72,1517	0/0:22,0:22:45.13:0,45,902	0/0:18,0:18:39.13:0,39,847	0/0:30,0:30:69.24:0,69,1499	0/0:26,0:26:60.21:0,60,1301	0/0:17,0:17:48.16:0,48,1043	0/0:31,0:31:66.23:0,66,1418	0/0:27,0:27:63.22:0,63,1348	0/0:31,0:31:81.25:0,81,1710	0/0:36,0:36:93.31:0,93,1956	0/0:20,0:20:39.11:0,39,753	0/0:14,0:14:42.14:0,42,912	0/0:39,0:39:99:0,99,2046	0/0:20,0:20:48.16:0,48,1042	0/0:15,0:15:42.14:0,42,900	0/0:32,0:32:90.28:0,90,1864	0/0:23,0:23:63.19:0,63,1326	0/0:27,0:27:63.22:0,63,1368	0/0:19,0:19:54.17:0,54,1102	0/0:13,0:13:30.10:0,30,649
chr10	54095394	.	TCAATTGATTCATATTCTC	T	6845.13	PASS	AB=1.000;AC=29;AF=0.630;AN=46;BaseQRankSum=8.564;DP=483;FS=7.747;HRun=0;HaplotypeScore=242.4462;InbreedingCoeff=0.7488;MQ=80.12;MQ0=0;MQRankSum=-8.825;QD=28.17;ReadPosRankSum=0.222;VQSLOD=2.6910;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:10,5:15:2.92:20,3,0	./.	0/0:24,0:24:57.19:0,57,2767	0/0:20,0:21:32.15:0,32,1559	0/1:23,0:23:1.88:39,0,2	./.	1/1:10,0:10:3.01:132,3,0	1/1:23,0:23:15.04:553,15,0	1/1:13,0:13:12.03:369,12,0	1/1:21,0:21:27.09:1099,27,0	0/0:10,0:10:1.25:0,1,3	0/0:25,0:25:51.17:0,51,3181	0/0:26,0:26:51.18:0,51,3078	1/1:10,0:10:6.02:243,6,0	1/1:28,0:28:12.04:515,12,0	1/1:19,0:19:21.06:716,21,0	1/1:12,0:12:12.04:412,12,0	1/1:3,0:3:3.01:90,3,0	1/1:20,0:20:15:337,15,0	./.	./.	0/0:28,0:28:69.24:0,69,4693	0/0:26,0:26:66.23:0,66,4413	0/0:22,0:22:51.18:0,51,3344	./.	1/1:19,0:18:36.11:1303,36,0	1/1:20,0:20:21.07:885,21,0	1/1:7,0:7:3.01:132,3,0
chr10	54095412	.	CCAATTGATTCATAT	C	6839.95	PASS	AB=0.674;AC=24;AF=0.444;AN=54;BaseQRankSum=8.908;DP=349;FS=4.903;HRun=0;HaplotypeScore=154.1193;InbreedingCoeff=0.4404;MQ=82.69;MQ0=0;MQRankSum=-7.988;QD=45.30;ReadPosRankSum=0.179;VQSLOD=4.4410;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:15,0:15:19.27:19,0,25	./.	0/0:30,0:28:67.60:0,68,3719	0/0:26,0:22:53.41:0,53,1891	0/1:2,10:12:5.82:37,0,6	0/0:2,3:5:2.22:0,2,7	1/1:3,4:7:5.81:145,6,0	1/1:0,5:5:15.04:553,15,0	1/1:1,6:8:12.03:369,12,0	1/1:5,8:12:26.14:1116,26,0	0/0:0,3:3:1.25:0,1,3	0/0:18,0:18:54.19:0,54,3381	0/0:21,0:21:54.19:0,54,3263	1/1:2,6:8:6.02:264,6,0	0/1:1,12:16:14.10:498,0,14	0/1:5,5:13:48.76:665,0,49	0/1:7,5:11:21.56:407,0,22	0/1:1,1:2:0.93:128,0,1	1/1:3,8:10:10.26:333,10,0	0/0:3,6:9:4.44:0,4,14	0/0:5,5:10:11.10:0,11,35	0/0:24,0:24:69.24:0,69,4693	0/0:22,0:22:66.23:0,66,4393	0/0:19,0:19:54.19:0,54,3359	0/0:2,9:10:2.22:0,2,7	1/1:3,13:15:24.29:1285,24,0	1/1:1,7:11:21.07:888,21,0	1/1:0,1:1:3.01:132,3,0
chr10	54095422	.	CATAT	C	1658.41	PASS	AB=0.966;AC=18;AF=0.321;AN=56;BaseQRankSum=9.560;DP=381;FS=3.749;HRun=0;HaplotypeScore=112.6920;InbreedingCoeff=0.0318;MQ=71.48;MQ0=10;MQRankSum=-8.105;QD=11.36;ReadPosRankSum=4.740;VQSLOD=2.7777;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:17,1:17:27.09:0,27,568	1/1:3,0:2:0.89:2,1,0	0/0:24,0:21:39.22:0,39,1535	0/0:31,0:21:44.42:0,44,993	0/0:13,0:13:5.20:0,5,76	0/0:5,0:5:6.02:0,6,95	0/1:10,0:9:35.80:36,0,44	0/1:13,0:13:99:138,0,447	1/1:6,0:6:6.02:84,6,0	0/1:12,0:11:99:302,0,205	0/0:5,0:5:1.25:0,1,3	0/0:17,0:17:48.16:0,48,1239	0/0:18,0:17:42.11:0,42,1049	1/1:9,0:9:6.02:85,6,0	0/1:14,3:17:65.08:178,0,65	0/1:10,3:13:99:192,0,180	0/1:12,0:10:59.83:60,0,335	0/1:4,0:4:31.66:32,0,123	0/1:15,0:14:57.99:58,0,579	0/0:11,0:11:6.02:0,6,120	0/0:12,0:11:12.04:0,12,241	0/0:26,0:26:69.23:0,69,1891	0/0:22,0:22:63.21:0,63,1725	0/0:21,0:20:49.06:0,49,1275	0/0:12,0:11:6.02:0,6,127	0/1:17,0:16:99:337,0,249	1/1:10,2:12:22.21:284,22,0	0/1:3,0:2:35.82:36,0,68
chr10	54095426	.	T	TTCTCTC	529.59	PASS	AB=1.000;AC=37;AF=0.804;AN=46;BaseQRankSum=0.856;DP=476;FS=14.647;HRun=0;HaplotypeScore=170.7283;InbreedingCoeff=0.1037;MQ=61.29;MQ0=16;MQRankSum=0.608;QD=1.44;ReadPosRankSum=-2.047;VQSLOD=1.7171;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:21:4.13:22,0,4	1/1:5,0:4:0.89:2,1,0	./.	./.	1/1:22,0:22:3.01:30,3,0	0/1:12,0:11:0:1,0,0	1/1:14,0:13:3.28:19,3,0	0/1:19,0:19:0:0,0,0	1/1:10,0:10:2.97:8,3,0	1/1:16,0:15:8.11:64,8,0	./.	1/1:17,0:17:2.98:22,3,0	1/1:14,4:19:2.77:63,3,0	1/1:14,0:14:4.57:63,5,0	1/1:18,0:18:7.99:49,8,0	0/1:14,0:13:10.29:10,0,99	0/1:17,0:13:35.84:50,0,36	1/1:5,0:4:4.65:42,5,0	1/1:18,0:16:3.06:9,3,0	1/1:13,0:13:3.44:21,3,0	0/0:20,0:16:1.32:0,1,2	0/1:32,0:32:0:0,0,0	./.	1/1:20,1:20:3.41:19,3,0	0/1:20,0:18:0:0,0,0	1/1:25,0:24:14.67:108,15,0	1/1:15,0:13:4.94:22,5,0	./.
chr10	54095482	.	CT	C	1406.42	PASS	AB=0.767;AC=21;AF=0.389;AN=54;BaseQRankSum=3.886;DP=410;FS=16.634;HRun=1;HaplotypeScore=72.2692;InbreedingCoeff=0.4287;MQ=48.82;MQ0=53;MQRankSum=-0.410;QD=7.03;ReadPosRankSum=0.223;VQSLOD=-0.7021;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:17:7.97:0,8,27	1/1:9,0:7:5.91:66,6,0	0/0:18,0:7:15.04:0,15,195	0/1:21,0:10:1.53:2,0,121	1/1:11,2:10:5.69:47,6,0	0/0:6,7:6:2.25:0,2,18	1/1:5,18:19:30.09:362,30,0	0/0:28,0:24:57.69:0,58,531	0/1:3,10:11:10.18:185,0,10	1/1:5,3:6:8.86:107,9,0	./.	0/0:19,0:19:48.15:0,48,688	0/0:12,0:11:16.07:0,16,264	1/1:15,0:11:5.54:52,6,0	1/1:16,1:14:8.53:78,9,0	1/1:13,3:11:12.77:149,13,0	0/1:12,9:13:99:192,0,122	0/1:5,8:10:21.18:127,0,21	0/0:7,0:7:17.49:0,17,111	0/0:8,0:7:7.58:0,8,41	0/0:7,0:5:0.45:0,0,1	0/0:15,0:15:33.11:0,33,459	0/0:10,0:10:23.74:0,24,303	0/0:18,0:17:0.39:0,0,308	1/1:7,4:6:5.95:54,6,0	0/1:19,1:15:50.36:158,0,50	0/0:15,0:13:17.12:0,17,91	0/0:5,4:3:0.40:0,0,1
chr10	54095483	.	T	TC	1543.02	PASS	AB=0.870;AC=27;AF=0.500;AN=54;BaseQRankSum=4.080;DP=407;FS=19.418;HRun=6;HaplotypeScore=79.4131;InbreedingCoeff=0.6801;MQ=49.48;MQ0=52;MQRankSum=-1.146;QD=6.65;ReadPosRankSum=-1.050;VQSLOD=-0.2128;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:16:11.74:0,12,46	1/1:1,1:7:5.91:60,6,0	0/0:18,0:7:15.03:0,15,152	0/1:21,0:10:1.26:1,0,110	1/1:4,10:11:6.02:71,6,0	0/1:12,1:6:0:0,0,0	1/1:22,2:20:30.09:361,30,0	0/0:27,0:23:40.02:0,40,447	1/1:12,1:11:20.92:219,21,0	1/1:5,1:4:9.03:108,9,0	0/1:2,9:8:0:0,0,0	0/0:19,0:19:48.10:0,48,489	0/0:12,0:11:18.04:0,18,184	1/1:3,11:10:5.98:57,6,0	1/1:5,2:15:6.02:67,6,0	1/1:6,3:11:9.31:77,9,0	0/1:17,3:13:3.98:233,0,4	1/1:13,0:10:11.87:145,12,0	0/0:7,0:6:7.50:0,7,33	0/0:7,0:6:7.98:0,8,45	0/1:7,0:5:0:0,0,0	0/0:15,0:15:33.07:0,33,334	0/0:9,0:9:21.04:0,21,214	0/0:18,0:17:3.56:0,4,193	1/1:6,4:5:5.95:55,6,0	1/1:10,13:18:29.38:270,29,0	0/0:16,0:14:20.06:0,20,92	./.
chr10	54095488	.	CCT	C	756.12	PASS	AC=10;AF=0.185;AN=54;BaseQRankSum=1.903;DP=398;FS=15.218;HRun=0;HaplotypeScore=72.8900;InbreedingCoeff=0.8347;MQ=53.76;MQ0=48;MQRankSum=-2.566;QD=16.09;ReadPosRankSum=0.288;VQSLOD=2.1560;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:13:32.90:327,33,0	0/0:7,0:5:8.75:0,9,66	0/0:23,0:9:18.06:0,18,288	0/0:26,0:15:22.26:0,22,242	0/0:15,0:12:14.96:0,15,165	0/0:11,0:5:5.99:0,6,49	0/0:23,0:19:35.99:0,36,363	0/0:26,0:23:55.91:0,56,803	0/0:14,0:12:23.42:0,23,236	0/0:10,0:9:23.92:0,24,203	0/0:10,0:7:5.95:0,6,61	0/0:20,0:20:57.20:0,57,1008	0/0:12,0:11:21.07:0,21,373	0/0:15,0:11:11.61:0,12,98	0/0:14,0:11:14.60:0,15,127	0/0:17,0:12:16.75:0,17,125	0/0:19,0:12:23.99:0,24,225	0/0:13,0:10:11.81:0,12,115	1/1:4,1:4:8.81:83,9,0	1/1:6,3:8:18:173,18,0	1/1:5,0:5:2.97:20,3,0	0/0:16,0:16:42.10:0,42,669	0/0:9,0:9:27.06:0,27,443	0/0:13,0:13:25.33:0,25,419	0/0:10,0:5:7.72:0,8,59	0/0:23,0:18:47.71:0,48,470	1/1:11,4:14:27.05:312,27,0	./.
chr10	54095879	.	GA	G	7126.86	PASS	AB=0.875;AC=25;AF=0.446;AN=56;BaseQRankSum=12.689;DP=730;FS=6.378;HRun=9;HaplotypeScore=76.1682;InbreedingCoeff=0.9275;MQ=77.77;MQ0=0;MQRankSum=0.794;QD=23.21;ReadPosRankSum=3.520;VQSLOD=5.7391;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,102,1143	0/0:11,0:11:30.09:0,30,344	0/0:24,0:24:34.07:0,34,527	0/1:12,0:13:26.17:26,0,95	1/1:0,31:31:90.04:824,90,0	1/1:1,23:24:66.04:604,66,0	1/1:4,25:29:60.02:549,60,0	0/0:39,0:38:99:0,99,1127	1/1:1,17:18:51.03:467,51,0	1/1:2,27:29:81.01:733,81,0	1/1:1,21:22:60.03:548,60,0	0/0:37,0:38:99:0,108,1226	0/0:26,0:26:75.20:0,75,846	1/1:2,33:35:90.05:824,90,0	0/0:29,1:30:59.78:0,60,932	0/0:22,0:22:54.16:0,54,623	1/1:0,25:25:66.04:604,66,0	1/1:1,20:21:60.03:549,60,0	0/0:26,0:26:44.83:0,45,769	0/0:22,0:23:66.03:0,66,741	0/0:39,0:38:99:0,105,1154	0/0:24,0:24:57.14:0,57,639	0/0:17,0:17:48.14:0,48,554	0/0:30,0:33:92.89:0,93,1008	1/1:1,23:23:60.03:549,60,0	1/1:4,23:27:69.03:631,69,0	0/0:30,2:32:35.32:0,35,894	1/1:0,8:8:24.01:220,24,0
chr10	54096099	.	G	GA	726.63	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-4.287;DP=798;FS=2.794;HRun=7;HaplotypeScore=148.2314;InbreedingCoeff=0.9410;MQ=73.00;MQ0=0;MQRankSum=-0.206;QD=25.95;ReadPosRankSum=-4.009;VQSLOD=0.9725;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:60,0:60:99:0,174,1673	0/0:15,0:15:36.02:0,36,340	0/0:15,0:14:20.99:0,21,202	0/0:12,0:12:33:0,33,301	0/0:28,0:28:75.10:0,75,713	0/0:30,0:30:84.11:0,84,805	0/0:36,0:36:99:0,102,974	1/1:4,24:28:69.20:821,69,0	0/0:23,0:23:57.07:0,57,544	0/0:32,0:32:75.10:0,75,724	0/0:15,0:15:39.05:0,39,371	0/0:30,0:30:84.13:0,84,811	0/0:36,0:36:96.14:0,96,927	0/0:36,0:36:99:0,99,950	0/0:41,0:41:99:0,114,1095	0/0:28,0:28:81.13:0,81,782	0/0:22,0:22:57.09:0,57,550	0/0:20,0:20:57.09:0,57,550	0/0:39,0:39:99:0,105,1005	0/0:24,0:24:63.08:0,63,601	0/0:44,0:44:99:0,117,1113	0/0:33,0:33:75.09:0,75,718	0/0:23,0:23:60.09:0,60,579	0/0:34,0:34:93.14:0,93,898	0/0:26,0:26:69.11:0,69,666	0/0:27,0:27:69.10:0,69,662	0/0:38,0:38:99:0,108,1042	0/0:3,0:3:9.01:0,9,87
chr10	54097254	.	TTCTC	T	1314.04	PASS	AB=1.000;AC=27;AF=0.563;AN=48;BaseQRankSum=-0.514;DP=599;FS=5.717;HRun=0;HaplotypeScore=138.6725;InbreedingCoeff=0.4032;MQ=55.61;MQ0=21;MQRankSum=0.708;QD=4.61;ReadPosRankSum=2.281;VQSLOD=2.1896;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/1:12,0:12:30.65:31,0,93	./.	./.	1/1:21,2:24:21.07:295,21,0	0/1:23,0:22:0:0,0,0	1/1:13,0:13:6:54,6,0	0/0:37,0:36:4.83:0,5,47	1/1:11,10:21:17.92:234,18,0	1/1:23,0:21:2.67:26,3,0	./.	0/0:19,0:25:6.02:0,6,100	0/0:30,0:31:18.94:0,19,283	1/1:14,4:17:18.06:276,18,0	0/0:40,0:38:27.08:0,27,372	0/0:32,0:31:0.22:0,0,589	1/1:11,0:14:0.89:2,1,0	1/1:8,0:12:2.84:14,3,0	1/1:14,0:14:6.49:91,6,0	0/1:21,0:20:11.28:11,0,12	1/1:19,0:19:9.01:105,9,0	0/0:23,0:24:2.70:0,3,46	0/0:26,0:24:6.02:0,6,89	0/0:12,0:15:3.01:0,3,51	1/1:11,3:15:18.05:233,18,0	1/1:24,0:24:4.82:32,5,0	0/1:24,0:24:8.48:60,0,8	0/1:8,0:7:0:0,0,0
chr10	54097288	.	CTCTCTCTCTCTCTG	C	1931.94	PASS	AB=1.000;AC=16;AF=0.286;AN=56;BaseQRankSum=6.693;DP=490;FS=37.368;HRun=0;HaplotypeScore=199.7892;InbreedingCoeff=0.7119;MQ=38.85;MQ0=20;MQRankSum=-4.022;QD=15.58;ReadPosRankSum=-4.638;VQSLOD=-0.0336;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:15:0.17:4,0,0	0/0:13,0:13:19.37:0,19,537	0/0:16,0:4:8.98:0,9,79	0/0:16,0:3:9.02:0,9,92	0/0:23,0:23:30.84:0,31,891	1/1:7,9:15:18.75:319,19,0	1/1:2,10:12:8.99:255,9,0	0/0:23,0:22:65.75:0,66,906	0/0:17,0:17:29.83:0,30,689	1/1:22,0:22:52.31:598,52,0	1/1:10,1:11:8.55:85,9,0	0/0:17,0:16:13.15:0,13,475	0/0:25,0:25:40.58:0,41,1425	0/0:23,0:23:28.90:0,29,886	0/0:30,0:27:26.46:0,26,1220	0/0:30,0:29:62.43:0,62,2313	0/1:8,0:8:35.53:60,0,36	0/1:7,0:6:17.98:46,0,18	0/0:6,0:5:11.99:0,12,217	0/0:19,0:18:20.45:0,20,400	0/0:10,0:10:11.71:0,12,201	0/0:13,0:13:7.91:0,8,274	0/0:19,0:18:23.53:0,24,503	0/0:17,0:16:19.96:0,20,616	0/0:28,0:28:37.40:0,37,1150	1/1:6,14:19:40.72:592,41,0	0/0:21,0:21:19.26:0,19,156	1/1:11,1:10:17.64:156,18,0
chr10	54097296	.	C	CTGTGTG	317.65	PASS	AB=0.926;AC=11;AF=0.196;AN=56;BaseQRankSum=0.927;DP=484;FS=11.030;HRun=0;HaplotypeScore=190.3043;InbreedingCoeff=0.2606;MQ=38.89;MQ0=14;MQRankSum=-1.166;QD=2.41;ReadPosRankSum=-2.733;VQSLOD=1.2605;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:14:0.89:2,1,0	0/1:13,0:13:24.16:24,0,218	0/0:23,0:7:17.99:0,18,342	0/0:15,0:5:15.03:0,15,299	0/1:28,0:28:99:114,0,220	0/0:16,0:16:4.84:0,5,13	0/0:15,0:15:8.27:0,8,114	0/0:25,0:25:61.88:0,62,942	0/1:17,0:17:5.23:5,0,213	0/0:21,0:21:54.18:0,54,1064	0/0:6,0:6:2.10:0,2,6	0/0:17,0:16:13.05:0,13,229	0/0:22,0:22:33.55:0,34,622	0/0:24,0:24:6.65:0,7,330	0/0:27,0:25:27.94:0,28,512	0/0:29,0:28:57.18:0,57,972	0/0:8,0:8:9.47:0,9,120	0/0:9,0:8:8.84:0,9,174	1/1:7,0:6:9.46:123,9,0	0/0:15,0:14:4.24:0,4,22	1/1:7,0:7:6.60:63,7,0	0/0:16,0:16:5.77:0,6,145	0/0:19,0:18:17.62:0,18,287	0/0:17,0:16:18.50:0,18,335	0/1:28,0:28:32.02:32,0,516	0/0:18,0:17:45.10:0,45,917	0/1:7,9:17:6.02:92,0,6	0/0:10,0:9:10.84:0,11,54
chr10	54097300	.	C	CTGTGTGTGTGTG	1836.57	PASS	AB=0.979;AC=17;AF=0.304;AN=56;BaseQRankSum=4.667;DP=644;FS=3.208;HRun=0;HaplotypeScore=288.8364;InbreedingCoeff=0.2336;MQ=37.49;MQ0=16;MQRankSum=-6.993;QD=6.63;ReadPosRankSum=-2.345;VQSLOD=2.1345;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:7,9:16:2.41:50,2,0	0/0:19,0:19:10.92:0,11,193	0/0:30,0:9:27.07:0,27,692	0/0:21,0:9:27.04:0,27,654	0/0:42,0:41:12.55:0,13,408	0/0:21,0:21:6.93:0,7,18	0/0:19,0:19:11.64:0,12,205	0/0:25,0:25:6.33:0,6,566	0/0:20,0:20:25.32:0,25,402	0/1:32,0:31:99:514,0,1514	0/0:16,0:16:1.68:0,2,5	0/0:20,0:19:8.44:0,8,250	0/1:25,0:25:51.77:52,0,667	0/0:28,0:28:27.28:0,27,625	0/1:28,0:28:28.61:29,0,161	0/1:29,0:31:7.77:8,0,383	0/0:8,0:8:4.84:0,5,76	0/0:10,0:9:9.03:0,9,214	1/1:7,0:7:8.96:188,9,0	1/1:20,0:19:5.22:42,5,0	1/1:8,0:8:3.26:22,3,0	0/0:21,0:21:6.67:0,7,219	0/1:33,0:32:5.53:6,0,378	0/0:20,0:18:18.27:0,18,571	0/0:47,0:47:37.29:0,37,879	0/1:26,0:25:99:452,0,1196	1/1:26,0:26:27.18:526,27,0	0/1:21,0:20:53.63:113,0,54
chr10	54097320	.	ATG	A	98.07	PASS	AB=0.936;AC=8;AF=0.143;AN=56;BaseQRankSum=4.166;DP=805;FS=8.707;HRun=0;HaplotypeScore=213.0370;InbreedingCoeff=0.1633;MQ=34.95;MQ0=16;MQRankSum=-4.630;QD=0.42;ReadPosRankSum=-0.104;VQSLOD=1.3530;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:16,0:16:0.03:0,0,0	0/0:22,3:25:8.76:0,9,173	0/0:47,0:15:45.15:0,45,852	0/0:32,0:12:36.09:0,36,659	0/0:41,9:49:12.50:0,12,200	0/1:22,0:22:0.08:0,0,0	0/0:19,0:19:15.03:0,15,226	0/0:28,1:27:53.79:0,54,785	0/0:19,1:20:12.04:0,12,210	0/1:44,4:45:41.19:41,0,1448	0/0:25,4:32:0:0,0,0	0/0:17,3:19:8.66:0,9,157	0/0:23,3:26:21.40:0,21,402	0/0:29,0:29:17.27:0,17,331	0/0:26,0:26:6:0,6,82	0/0:32,0:33:22.03:0,22,407	0/0:7,0:7:2.99:0,3,58	0/0:6,0:6:9.03:0,9,173	0/0:11,0:9:23.56:0,24,314	1/1:30,13:44:0.16:0,0,0	0/0:8,0:6:3.01:0,3,53	0/1:30,7:38:2.13:2,0,108	0/0:37,12:48:14.52:0,15,288	0/0:14,3:16:17.46:0,17,346	0/0:53,7:61:26.55:0,27,468	0/1:36,2:38:8.27:8,0,1367	0/1:23,3:26:99:141,0,391	0/0:24,0:24:12.94:0,13,127
chr10	54097326	.	GTA	G	98.04	PASS	AB=0.904;AC=13;AF=0.232;AN=56;BaseQRankSum=5.719;DP=801;FS=16.813;HRun=0;HaplotypeScore=208.6732;InbreedingCoeff=-0.0381;MQ=34.69;MQ0=16;MQRankSum=-6.705;QD=0.30;ReadPosRankSum=1.054;VQSLOD=1.0579;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:15,0:15:0.03:1,0,0	0/0:24,1:25:9.03:0,9,164	0/0:47,0:16:47.93:0,48,820	0/0:32,0:12:36.12:0,36,614	0/0:46,6:51:9.39:0,9,175	0/1:18,4:22:0.08:0,0,0	0/0:17,1:18:11.99:0,12,191	0/1:29,2:29:18.82:19,0,761	0/0:15,3:18:8.72:0,9,90	0/1:45,3:45:18.01:18,0,1341	0/1:30,2:32:0.20:0,0,0	0/0:20,1:20:7.63:0,8,122	0/1:23,4:27:18.12:18,0,347	0/0:22,3:25:14.24:0,14,256	0/0:25,0:24:3.01:0,3,58	0/0:29,5:34:22.01:0,22,365	0/1:7,0:7:11.85:12,0,51	0/0:4,1:5:9.03:0,9,168	0/1:12,2:11:66.90:67,0,241	1/1:43,2:45:0.16:0,0,0	0/0:8,0:6:3.01:0,3,58	0/1:30,8:38:2.13:2,0,108	0/0:47,1:47:14.52:0,15,288	0/0:17,0:16:17.29:0,17,302	0/0:54,6:60:3.58:0,4,361	0/0:36,2:37:33.50:0,33,1184	0/1:19,7:26:73.25:73,0,201	0/1:21,2:23:8.13:8,0,81
chr10	54097342	.	G	GTA	76.48	PASS	AB=0.994;AC=10;AF=0.179;AN=56;BaseQRankSum=3.490;DP=745;FS=5.022;HRun=0;HaplotypeScore=192.9136;InbreedingCoeff=0.1344;MQ=35.64;MQ0=13;MQRankSum=-2.724;QD=0.33;ReadPosRankSum=0.595;VQSLOD=2.5308;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:12,0:12:0.05:0,0,0	0/0:23,0:23:6.08:0,6,43	0/0:36,0:12:29.99:0,30,394	0/0:30,0:14:23.40:0,23,299	0/0:54,0:54:7.37:0,7,94	0/1:19,0:19:0.25:1,0,0	0/0:17,0:17:4.84:0,5,27	0/0:25,0:24:43.09:0,43,258	0/0:17,0:17:2.58:0,3,24	0/1:45,1:43:84.52:85,0,454	0/1:32,0:32:0.07:0,0,0	0/0:14,4:17:5.96:0,6,92	0/0:21,5:25:14.08:0,14,226	0/0:22,0:22:6.78:0,7,72	0/0:25,0:24:0.07:0,0,2	0/0:29,0:29:5.96:0,6,64	0/1:6,0:6:8.13:8,0,29	0/0:4,0:4:4.98:0,5,24	0/1:13,0:11:6.49:6,0,157	0/1:43,0:43:0.52:1,0,1	0/0:6,0:4:3.01:0,3,46	0/0:35,3:38:4.33:0,4,49	0/0:39,8:48:15.03:0,15,200	0/0:13,3:15:12.01:0,12,183	0/0:55,0:55:5.76:0,6,65	0/1:32,1:32:61.90:62,0,378	0/0:25,0:25:18.47:0,18,167	1/1:25,0:25:1.62:20,2,0
chr10	54097344	.	G	GTA	469.76	PASS	AB=0.901;AC=12;AF=0.214;AN=56;BaseQRankSum=4.303;DP=743;FS=19.789;HRun=0;HaplotypeScore=191.8583;InbreedingCoeff=0.1112;MQ=36.75;MQ0=13;MQRankSum=-2.738;QD=1.61;ReadPosRankSum=3.573;VQSLOD=1.0713;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:12,0:12:0.06:0,0,0	0/0:22,1:23:6.07:0,6,43	0/0:35,0:11:30.03:0,30,402	0/0:30,0:14:13.33:0,13,256	0/0:47,6:53:7.37:0,7,93	0/1:15,4:19:0.25:1,0,0	0/0:16,1:17:4.84:0,5,27	0/1:24,1:24:21.47:21,0,192	0/1:14,3:17:0:0,0,0	0/1:43,3:43:99:119,0,490	0/1:31,2:33:0.07:0,0,0	0/0:18,1:18:5.96:0,6,92	0/0:22,4:25:14.07:0,14,225	0/0:19,3:22:6.78:0,7,72	0/0:24,1:24:0.07:0,0,2	0/0:24,5:29:6.48:0,6,64	0/0:6,0:6:8.85:0,9,56	0/0:3,1:4:2.22:0,2,7	0/1:10,3:11:95.36:116,0,95	0/1:42,2:44:0.95:1,0,1	0/0:6,0:4:3.01:0,3,46	0/0:30,8:38:4.33:0,4,49	0/0:47,1:48:15.03:0,15,200	0/0:16,0:15:12.01:0,12,181	0/0:48,6:54:5.76:0,6,65	0/1:31,2:32:76.28:76,0,401	0/1:17,7:24:49.55:190,0,50	1/1:23,2:25:5.34:64,5,0
chr10	54097348	.	A	ATG	2201.46	PASS	AB=0.808;AC=24;AF=0.429;AN=56;BaseQRankSum=-2.989;DP=721;FS=1.028;HRun=0;HaplotypeScore=179.9182;InbreedingCoeff=0.1952;MQ=34.98;MQ0=12;MQRankSum=-1.206;QD=4.98;ReadPosRankSum=2.008;VQSLOD=3.1736;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:9,2:11:0.07:0,0,0	1/1:14,6:23:5.06:83,5,0	0/0:32,0:11:18.06:0,18,233	0/0:24,0:10:10.47:0,10,103	1/1:35,15:54:3.21:48,3,0	0/1:9,9:18:0.25:1,0,0	1/1:9,6:15:9.03:143,9,0	0/1:10,12:21:10.69:489,0,11	0/1:14,2:16:0:0,0,0	0/1:24,16:43:94.92:780,0,95	0/1:22,6:34:0.28:0,0,0	0/0:19,0:18:5.90:0,6,79	0/0:25,0:24:7.99:0,8,118	0/0:8,11:21:0.78:0,1,3	0/0:18,7:24:0.07:0,0,2	1/1:23,5:29:2.12:48,2,0	0/0:4,1:5:2.91:0,3,20	1/1:1,3:4:3.01:52,3,0	0/1:11,1:10:7.39:84,0,7	0/1:32,11:43:0.52:1,0,1	1/1:4,2:4:1.79:6,2,0	0/0:38,0:38:4.33:0,4,43	0/0:47,0:47:8.99:0,9,100	0/0:16,0:15:5.98:0,6,79	1/1:36,10:54:2.01:45,2,0	0/1:21,6:30:95.30:471,0,95	0/1:21,3:24:86.99:87,0,140	0/0:9,10:25:1.08:0,1,27
chr10	54097352	.	G	GTA	1383.15	PASS	AB=0.988;AC=22;AF=0.393;AN=56;BaseQRankSum=-1.252;DP=703;FS=11.302;HRun=0;HaplotypeScore=180.8934;InbreedingCoeff=0.1698;MQ=36.25;MQ0=12;MQRankSum=-2.964;QD=3.42;ReadPosRankSum=2.837;VQSLOD=1.8508;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:0:0,0,0	1/1:23,1:24:4.59:41,5,0	0/0:29,0:9:21.06:0,21,298	0/0:24,0:11:20.21:0,20,234	1/1:53,0:53:3.25:25,3,0	0/1:18,0:18:0.25:1,0,0	1/1:11,1:12:8.98:86,9,0	0/1:21,0:20:5.88:271,0,6	0/1:15,0:15:0:0,0,0	0/1:44,1:42:99:539,0,123	0/0:32,2:34:0.56:0,1,2	0/0:19,0:18:5.96:0,6,91	0/0:25,0:24:6.99:0,7,154	0/0:19,2:21:0.78:0,1,3	0/0:25,0:24:0.07:0,0,2	1/1:27,0:28:2.79:32,3,0	0/0:5,0:5:1.25:0,1,3	1/1:4,0:4:3.01:33,3,0	0/1:11,0:9:35.25:44,0,35	1/1:42,0:42:0.02:2,0,0	0/0:6,0:4:2.84:0,3,14	0/0:38,0:38:4.07:0,4,49	0/0:48,0:48:8.22:0,8,129	0/0:16,0:15:8.93:0,9,109	1/1:52,0:53:2.12:21,2,0	0/1:29,0:29:79.35:313,0,79	0/1:24,0:24:95.30:95,0,187	0/1:22,2:24:11.64:19,0,12
chr10	54097358	.	G	GTATA	981.17	PASS	AB=0.914;AC=13;AF=0.241;AN=54;BaseQRankSum=3.524;DP=660;FS=4.872;HRun=0;HaplotypeScore=185.2134;InbreedingCoeff=0.1604;MQ=40.90;MQ0=8;MQRankSum=-1.712;QD=3.47;ReadPosRankSum=0.313;VQSLOD=2.2843;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:9,0:9:0:0,0,0	0/1:22,1:23:1.37:1,0,2	0/0:27,0:10:20.26:0,20,261	0/0:19,0:9:9.80:0,10,116	0/0:42,10:52:7.67:0,8,23	0/0:16,0:16:0.14:0,0,1	0/0:11,1:12:3.21:0,3,13	0/0:18,0:18:28.91:0,29,196	0/0:10,1:11:0:0,0,0	0/1:34,5:38:99:386,0,161	0/1:28,6:34:2.64:3,0,3	0/0:15,3:17:2.19:0,2,59	0/0:21,3:23:3.59:0,4,122	0/1:17,1:18:0.23:1,0,0	0/0:24,1:24:0.17:0,0,1	1/1:26,0:26:7.25:30,7,0	0/0:2,0:3:2.68:0,3,11	0/0:4,0:4:2.84:0,3,14	0/1:8,0:7:21.35:70,0,21	0/0:31,10:41:5.09:0,5,15	./.	0/0:34,5:39:8.45:0,8,78	0/0:43,6:49:13.86:0,14,120	0/0:13,2:14:2.50:0,3,20	0/1:43,9:52:0.82:1,0,15	0/1:24,3:27:57.17:249,0,57	0/1:19,5:24:99:244,0,103	1/1:22,1:23:11.05:121,11,0
chr10	54097360	.	G	GTA	2251.67	PASS	AB=0.947;AC=31;AF=0.574;AN=54;BaseQRankSum=0.342;DP=639;FS=2.935;HRun=0;HaplotypeScore=165.5290;InbreedingCoeff=0.0597;MQ=42.12;MQ0=7;MQRankSum=-0.442;QD=4.17;ReadPosRankSum=1.154;VQSLOD=2.9931;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:0:0,0,0	1/1:20,2:22:2.05:50,2,0	0/1:23,3:10:92.34:92,0,155	0/1:17,1:9:56.25:122,0,56	1/1:47,5:52:6.28:101,6,0	0/1:15,0:15:0.25:1,0,0	1/1:12,0:12:8.98:87,9,0	0/1:17,0:17:42.33:42,0,65	0/1:11,0:11:0:0,0,0	0/1:31,4:34:0.99:594,0,1	1/1:31,4:35:4.54:98,5,0	0/0:17,1:17:2.95:0,3,46	0/0:20,4:23:8.13:0,8,102	0/0:18,0:18:0.78:0,1,3	0/0:24,0:23:0.18:0,0,2	1/1:26,0:26:7.17:45,7,0	0/0:2,0:3:1.55:0,2,4	1/1:4,0:4:3.01:35,3,0	0/1:6,0:6:4.49:27,0,4	1/1:33,4:37:6.04:102,6,0	./.	0/1:29,10:39:37.30:91,0,37	0/1:45,4:49:51.82:179,0,52	0/1:13,0:12:0.03:0,0,0	1/1:46,4:50:14.09:221,14,0	1/1:26,0:26:6.27:360,6,0	1/1:22,1:23:16.81:110,17,0	0/1:23,0:23:5.52:26,0,6
chr10	54097362	.	G	GTA	322.95	PASS	AB=0.979;AC=22;AF=0.407;AN=54;BaseQRankSum=1.656;DP=627;FS=3.649;HRun=0;HaplotypeScore=169.1156;InbreedingCoeff=0.1508;MQ=43.33;MQ0=7;MQRankSum=-1.226;QD=0.71;ReadPosRankSum=-1.400;VQSLOD=2.5941;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:8:0:0,0,0	1/1:22,0:22:1.94:15,2,0	0/0:27,0:11:15.55:0,16,191	0/0:19,0:9:3.37:0,3,112	1/1:50,1:51:6.09:35,6,0	0/1:13,1:14:0.25:1,0,0	0/0:11,0:11:3.64:0,4,12	0/0:16,0:16:25.52:0,26,113	0/1:11,0:11:0:0,0,0	0/1:34,1:34:65.22:65,0,215	1/1:35,0:35:4.36:32,4,0	0/0:18,0:17:2.95:0,3,45	0/0:24,0:23:3.68:0,4,48	0/0:16,1:17:0.78:0,1,3	0/0:24,0:23:0.18:0,0,2	1/1:24,0:24:0.28:0,0,0	0/1:3,0:3:0:0,0,0	0/0:4,0:4:2.37:0,2,8	0/0:4,0:4:2.80:0,3,7	1/1:37,0:37:5.84:34,6,0	./.	0/1:39,0:39:21.78:22,0,37	0/1:48,0:48:32.61:47,0,33	0/1:13,0:12:0.03:0,0,0	1/1:47,3:50:11.32:67,11,0	0/1:23,2:25:81.43:121,0,81	0/1:22,0:22:4.65:5,0,69	0/1:22,1:23:8.42:8,0,17
chr10	54097967	.	A	ATG	699.51	PASS	AB=0.994;AC=11;AF=0.196;AN=56;BaseQRankSum=8.829;DP=919;FS=30.675;HRun=0;HaplotypeScore=211.9492;InbreedingCoeff=-0.0262;MQ=33.92;MQ0=7;MQRankSum=-6.568;QD=2.53;ReadPosRankSum=5.195;VQSLOD=1.3222;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:11.89:0,12,196	0/0:28,1:29:9.89:0,10,94	0/0:14,0:6:15.35:0,15,168	0/0:8,0:6:11.25:0,11,124	0/0:48,0:48:5.02:0,5,79	0/0:40,0:39:6.75:0,7,62	0/0:30,1:30:6.92:0,7,93	0/0:24,0:24:5.58:0,6,541	1/1:34,0:34:0.89:2,1,0	0/1:67,0:67:99:473,0,550	1/1:38,0:38:0.47:1,0,0	0/0:35,0:35:5.31:0,5,63	0/0:29,0:29:21.95:0,22,252	0/0:33,0:33:7.96:0,8,93	0/0:50,0:50:10:0,10,130	0/0:28,0:28:11.08:0,11,104	0/1:11,0:11:0:1,0,0	0/1:11,0:11:6.21:6,0,211	0/1:20,1:19:43.54:44,0,253	0/0:71,1:72:2.87:0,3,33	0/0:11,0:11:20.60:0,21,235	0/0:49,1:50:5.09:0,5,65	0/0:39,0:39:1.80:0,2,40	0/0:14,0:14:5.46:0,5,57	0/0:54,0:54:2.08:0,2,33	0/1:46,0:45:99:238,0,716	0/1:32,0:31:45.58:46,0,357	0/1:17,0:17:1.17:1,0,107
chr10	54097969	.	G	GTA	368.47	PASS	AB=0.993;AC=9;AF=0.161;AN=56;BaseQRankSum=7.599;DP=937;FS=34.491;HRun=0;HaplotypeScore=217.9117;InbreedingCoeff=0.0468;MQ=34.18;MQ0=7;MQRankSum=-4.565;QD=1.56;ReadPosRankSum=4.721;VQSLOD=1.4540;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:11.89:0,12,223	0/0:29,0:29:9.50:0,10,132	0/0:17,0:9:15.31:0,15,195	0/0:8,0:6:20:0,20,196	0/0:48,0:48:5.02:0,5,90	0/0:41,0:39:10.23:0,10,116	0/0:32,0:31:6.94:0,7,128	0/0:24,0:24:23.12:0,23,754	1/1:34,0:34:0.89:2,1,0	0/1:67,1:68:99:273,0,879	1/1:37,1:38:0.47:1,0,0	0/0:35,0:35:5.33:0,5,88	0/0:32,0:32:22.03:0,22,307	0/0:33,0:33:8.17:0,8,126	0/0:51,0:51:10.03:0,10,177	0/0:28,0:28:11.40:0,11,160	0/1:11,0:11:0:1,0,0	0/0:11,0:11:14.90:0,15,288	0/1:22,0:19:60.04:60,0,379	0/0:72,0:72:2.87:0,3,44	0/0:11,0:11:20.92:0,21,305	0/0:51,0:51:5.09:0,5,89	0/0:39,1:40:1.80:0,2,44	0/0:14,0:14:5.53:0,6,84	0/0:56,1:57:5.08:0,5,69	0/1:45,0:45:99:118,0,942	0/0:33,0:32:4.88:0,5,456	0/1:17,0:17:21.71:22,0,155
chr10	54097999	.	G	GA	13235.72	PASS	AB=0.897;AC=54;AF=0.964;AN=56;BaseQRankSum=1.595;DP=633;FS=9.083;HRun=1;HaplotypeScore=169.9882;InbreedingCoeff=-0.0318;MQ=47.39;MQ0=1;MQRankSum=-3.428;QD=20.91;ReadPosRankSum=3.226;VQSLOD=4.2640;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:34,0:34:59.95:533,60,0	1/1:12,0:12:32.98:291,33,0	0/1:17,6:21:14.96:338,0,15	0/1:20,0:19:4.88:334,0,5	1/1:23,0:23:44.86:397,45,0	1/1:33,0:33:84:775,84,0	1/1:21,0:21:44.94:393,45,0	1/1:21,0:20:53.55:406,54,0	1/1:33,0:33:84.03:784,84,0	1/1:27,1:28:77.57:608,78,0	1/1:15,0:15:33.03:331,33,0	1/1:29,0:29:71.97:661,72,0	1/1:30,0:30:65.85:594,66,0	1/1:28,0:28:57.02:535,57,0	1/1:38,0:38:78.08:752,78,0	1/1:27,0:27:66.02:616,66,0	1/1:14,0:14:36.01:327,36,0	1/1:15,0:15:38.97:337,39,0	1/1:18,0:16:41.73:335,42,0	1/1:25,0:25:65.96:613,66,0	1/1:20,0:20:56.88:467,57,0	1/1:17,0:17:38.98:360,39,0	1/1:11,0:11:26.99:243,27,0	1/1:21,0:21:44.79:359,45,0	1/1:22,0:22:59.19:519,59,0	1/1:18,0:18:54.02:496,54,0	1/1:25,0:24:59.95:538,60,0	1/1:11,0:11:32.99:293,33,0
chr10	54099543	.	TG	T	5643.96	PASS	AB=0.750;AC=41;AF=0.732;AN=56;BaseQRankSum=5.524;DP=379;FS=15.958;HRun=10;HaplotypeScore=63.3727;InbreedingCoeff=0.8375;MQ=68.41;MQ0=0;MQRankSum=1.188;QD=18.69;ReadPosRankSum=2.242;VQSLOD=4.1805;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,16:23:52.06:429,52,0	1/1:1,4:5:8.99:78,9,0	0/0:6,0:8:8.70:0,9,68	0/0:7,0:6:3.75:0,4,32	1/1:1,8:9:21:182,21,0	1/1:1,8:9:23.99:208,24,0	1/1:5,15:19:40.22:361,40,0	0/1:8,4:12:23.71:86,0,24	1/1:3,10:13:26.99:234,27,0	1/1:3,13:16:38.95:335,39,0	1/1:4,12:16:38.96:335,39,0	0/0:11,0:11:33.09:0,33,365	0/0:12,0:12:33.07:0,33,353	1/1:2,12:14:35.98:313,36,0	1/1:1,11:12:32.97:286,33,0	1/1:1,11:12:32.97:286,33,0	1/1:2,20:22:59.91:514,60,0	1/1:4,10:14:29.98:260,30,0	1/1:4,6:10:17.25:155,17,0	1/1:4,9:13:23.89:199,24,0	1/1:10,32:42:71.97:625,72,0	0/0:5,0:5:8.96:0,9,84	0/0:12,0:12:24.06:0,24,265	0/0:21,0:21:54.14:0,54,588	1/1:2,6:9:17.02:136,17,0	1/1:3,9:12:26.96:234,27,0	1/1:2,12:14:32.97:282,33,0	1/1:0,5:5:12:104,12,0
chr10	54099869	.	AT	A	765.09	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.922;DP=464;FS=0.000;HRun=9;HaplotypeScore=45.9509;InbreedingCoeff=0.9058;MQ=71.07;MQ0=0;MQRankSum=0.423;QD=20.68;ReadPosRankSum=-4.125;VQSLOD=2.1059;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,120,1374	0/0:9,0:9:24.06:0,24,267	0/0:16,0:14:15.17:0,15,189	0/0:8,0:7:11.71:0,12,88	0/0:25,0:24:72.20:0,72,820	0/0:12,0:12:33.10:0,33,381	0/0:18,0:18:48.13:0,48,544	1/1:5,32:37:95.98:860,96,0	0/0:13,0:13:30.09:0,30,346	0/0:22,0:22:54.14:0,54,607	0/0:9,0:9:21.03:0,21,221	0/0:11,0:11:33.08:0,33,367	0/0:15,0:15:45.12:0,45,509	0/0:19,0:19:57.15:0,57,640	0/0:11,0:11:33.08:0,33,370	0/0:7,0:7:15.02:0,15,153	0/0:18,0:19:54.14:0,54,611	0/0:19,0:19:51.15:0,51,589	0/0:27,0:27:72.17:0,72,796	0/0:19,0:19:48.14:0,48,554	0/0:11,0:11:30.09:0,30,346	0/0:4,0:4:12.04:0,12,138	0/0:12,0:12:36.09:0,36,405	0/0:12,0:12:30.07:0,30,335	0/0:13,0:13:36.11:0,36,415	0/0:25,0:25:72.19:0,72,814	0/0:16,0:16:39.09:0,39,429	0/0:14,0:14:38.88:0,39,449
chr10	54099913	.	C	CAGTATTAGA	1995.79	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-1.091;DP=508;FS=24.163;HRun=0;HaplotypeScore=131.0588;InbreedingCoeff=0.9775;MQ=78.57;MQ0=0;MQRankSum=-4.631;QD=52.52;ReadPosRankSum=-4.681;VQSLOD=1.1013;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,102,2910	0/0:15,0:15:42.14:0,42,1130	0/0:16,0:15:36.12:0,36,933	0/0:9,0:9:21.07:0,21,576	0/0:18,0:18:48.14:0,48,1336	0/0:15,0:15:45.15:0,45,1295	0/0:18,0:18:45.15:0,45,1241	1/1:33,5:38:54.19:2091,54,0	0/0:13,0:13:39.12:0,39,1075	0/0:16,0:16:48.16:0,48,1310	0/0:9,0:9:24.08:0,24,700	0/0:13,0:13:36.11:0,36,949	0/0:18,0:18:48.16:0,48,1363	0/0:22,0:22:54.18:0,54,1511	0/0:13,0:13:36.12:0,36,1050	0/0:11,0:11:30.10:0,30,875	0/0:22,0:22:57.18:0,57,1583	0/0:19,0:19:51.18:0,51,1454	0/0:22,0:22:54.18:0,54,1479	0/0:25,0:25:63.22:0,63,1800	0/0:13,0:13:39.12:0,39,992	0/0:15,0:15:42.14:0,42,1182	0/0:18,0:18:45.15:0,45,1277	0/0:21,0:21:54.15:0,54,1357	0/0:20,0:20:51.18:0,51,1488	0/0:31,0:31:87.29:0,87,2355	0/0:13,0:13:39.12:0,39,1045	0/0:5,0:5:15.05:0,15,438
chr10	54100143	.	A	AG	5621.12	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=0.866;DP=755;FS=14.927;HRun=3;HaplotypeScore=95.7049;InbreedingCoeff=0.9998;MQ=85.19;MQ0=0;MQRankSum=-0.984;QD=37.73;ReadPosRankSum=0.121;VQSLOD=3.1568;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:57:99:0,165,1936	0/0:11,0:11:30.09:0,30,360	0/0:25,0:25:60.08:0,60,759	0/0:24,0:25:57.12:0,57,648	0/0:29,0:29:81.16:0,81,949	1/1:1,20:21:57.19:798,57,0	1/1:1,34:35:99:1386,99,0	0/0:26,0:26:75.23:0,75,900	0/0:26,0:26:78.23:0,78,924	1/1:1,24:25:72.24:1006,72,0	1/1:3,10:13:33.02:437,33,0	0/0:35,0:35:99:0,102,1213	0/0:25,0:25:69.21:0,69,828	0/0:23,0:23:69.20:0,69,817	0/0:31,0:31:93.28:0,93,1106	0/0:16,0:16:48.13:0,48,565	0/0:30,0:30:66.20:0,66,792	0/0:25,0:25:66.15:0,66,775	0/0:21,0:21:60.17:0,60,709	0/0:19,0:19:54.17:0,54,647	0/0:53,0:53:99:0,147,1712	0/0:18,0:18:51.16:0,51,612	0/0:27,0:27:69.18:0,69,804	0/0:36,0:35:99:0,105,1260	0/0:22,0:22:57.16:0,57,667	1/1:5,37:42:99:1489,108,0	0/0:25,0:24:69.21:0,69,826	1/1:0,13:13:36.12:504,36,0
chr10	54100182	.	T	TG	3409.24	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-3.572;DP=799;FS=3.281;HRun=1;HaplotypeScore=124.8460;InbreedingCoeff=0.9992;MQ=88.26;MQ0=0;MQRankSum=-2.702;QD=36.27;ReadPosRankSum=0.064;VQSLOD=3.2461;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:74,0:73:99:0,217,2786	0/0:15,0:15:45.14:0,45,575	0/0:22,0:22:60.16:0,60,746	0/0:34,0:34:93.27:0,93,1188	0/0:22,0:22:66.18:0,66,821	0/0:27,0:27:78.25:0,78,1013	0/0:33,0:33:90.26:0,90,1138	1/1:5,23:28:69.21:981,69,0	0/0:26,0:26:75.24:0,75,971	0/0:27,0:27:81.26:0,81,1033	0/0:9,0:9:24.08:0,24,309	0/0:29,0:29:84.27:0,84,1089	0/0:27,0:27:78.24:0,78,993	0/0:22,0:22:63.19:0,63,803	0/0:28,0:28:84.27:0,84,1088	0/0:23,0:23:60.19:0,60,779	1/1:0,38:39:93.32:1394,93,0	1/1:0,27:27:69.23:1034,69,0	0/0:26,0:26:72.19:0,72,915	0/0:14,0:14:42.14:0,42,544	0/0:50,0:50:99:0,141,1829	0/0:24,0:24:69.21:0,69,876	0/0:28,0:28:81.23:0,81,1014	0/0:55,0:54:99:0,162,2044	0/0:26,0:26:75.20:0,75,939	0/0:28,0:28:81.25:0,81,1037	0/0:24,0:24:66.21:0,66,853	0/0:12,0:12:36.10:0,36,451
chr10	54101076	.	CA	C	6439.17	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=13.359;DP=604;FS=3.677;HRun=8;HaplotypeScore=64.6085;InbreedingCoeff=0.9988;MQ=79.19;MQ0=0;MQRankSum=-0.743;QD=24.30;ReadPosRankSum=2.249;VQSLOD=5.8634;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,27:31:69.10:666,69,0	1/1:1,7:8:21.03:203,21,0	0/0:16,0:16:21.49:0,21,281	0/0:17,0:17:38.34:0,38,371	0/0:32,0:32:96.27:0,96,1146	0/0:23,0:23:48.15:0,48,580	0/0:13,0:13:39.08:0,39,455	1/1:1,30:31:90.14:869,90,0	0/0:21,0:21:60.18:0,60,724	0/0:23,0:23:60.17:0,60,714	0/0:18,0:18:51.16:0,51,616	0/0:16,0:16:48.14:0,48,570	0/0:24,0:24:69.21:0,69,833	0/0:11,0:11:33.10:0,33,396	1/1:2,17:19:45.07:435,45,0	1/1:0,19:19:54.09:521,54,0	1/1:4,23:27:63.09:608,63,0	1/1:4,22:26:60.09:579,60,0	1/1:2,19:21:57.08:546,57,0	1/1:3,29:32:75.10:724,75,0	1/1:1,23:26:73.18:678,73,0	0/0:18,0:18:54.17:0,54,652	0/0:25,1:26:43.24:0,43,804	0/0:18,0:18:51.16:0,51,616	0/0:18,0:18:45.14:0,45,544	0/0:29,0:29:75.20:0,75,883	1/1:3,22:25:63.09:608,63,0	0/0:16,0:16:42.11:0,42,494
chr10	54101347	.	CCTTA	C	11286.79	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=10.471;DP=574;FS=3.264;HRun=0;HaplotypeScore=137.0709;InbreedingCoeff=0.9982;MQ=77.54;MQ0=0;MQRankSum=-17.042;QD=53.24;ReadPosRankSum=0.512;VQSLOD=5.9050;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,32:36:90.31:1787,90,0	1/1:1,7:8:21.07:419,21,0	0/0:22,0:21:51.07:0,51,1158	0/0:20,0:20:52.38:0,52,1084	0/0:22,0:22:66.23:0,66,1772	0/0:20,0:20:57.15:0,57,1536	0/0:24,0:24:60.21:0,60,1580	1/1:2,20:22:63.22:1257,63,0	0/0:25,0:25:75.26:0,75,2090	0/0:24,0:24:72.25:0,72,2012	0/0:15,0:15:45.15:0,45,1222	0/0:27,0:27:78.27:0,78,2063	0/0:26,0:26:78.27:0,78,2098	0/0:24,0:24:66.23:0,66,1835	1/1:0,19:19:57.19:1109,57,0	1/1:0,23:23:69.24:1372,69,0	1/1:4,20:24:66.23:1297,66,0	1/1:1,10:11:33.11:639,33,0	1/1:1,6:7:18.06:359,18,0	1/1:3,16:19:51.16:959,51,0	1/1:3,13:16:33.09:572,33,0	0/0:16,0:16:48.16:0,48,1301	0/0:18,0:18:48.16:0,48,1247	0/0:19,0:19:57.20:0,57,1557	0/0:17,0:17:48.16:0,48,1272	0/0:27,0:27:81.28:0,81,2176	1/1:4,23:27:78.27:1517,78,0	0/0:16,0:16:36.12:0,36,899
chr10	54101358	.	GA	G	8242.99	PASS	AB=0.900;AC=43;AF=0.768;AN=56;BaseQRankSum=9.672;DP=587;FS=4.655;HRun=10;HaplotypeScore=117.6359;InbreedingCoeff=0.8982;MQ=74.39;MQ0=0;MQRankSum=-8.090;QD=18.04;ReadPosRankSum=4.330;VQSLOD=4.4669;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:15,22:37:59.42:459,59,0	1/1:2,6:8:20.97:177,21,0	0/0:22,0:21:11.04:0,11,289	0/0:18,0:18:9.03:0,9,258	1/1:1,21:22:59.98:520,60,0	1/1:0,20:20:50.99:443,51,0	1/1:3,18:21:38.98:339,39,0	1/1:6,21:27:29.48:456,29,0	1/1:4,22:27:68.02:579,68,0	1/1:3,21:24:62.98:544,63,0	1/1:2,13:15:32.98:286,33,0	0/0:23,0:23:60.14:0,60,652	0/1:24,3:27:6.01:6,0,599	1/1:2,20:22:53.98:469,54,0	1/1:3,17:21:52.78:418,53,0	1/1:2,21:23:62.86:525,63,0	1/1:6,17:23:47.57:399,48,0	1/1:4,9:13:23.98:208,24,0	1/1:2,7:9:23.93:198,24,0	1/1:5,14:19:47.88:396,48,0	1/1:6,14:20:20.43:181,20,0	0/0:23,0:23:62.95:0,63,643	0/0:23,1:26:38.92:0,39,584	0/0:18,0:18:48.10:0,48,514	1/1:1,12:13:35.99:312,36,0	1/1:3,22:25:65.02:553,65,0	1/1:2,27:29:44.81:594,45,0	1/1:1,11:12:20.98:182,21,0
chr10	54103234	.	GTGGTGGTGGTGGTGGTGGTGA	G	858.72	PASS	AB=1.000;AC=14;AF=0.280;AN=50;BaseQRankSum=2.176;DP=330;FS=2.057;HRun=0;HaplotypeScore=98.5875;InbreedingCoeff=0.3738;MQ=34.35;MQ0=60;MQRankSum=-1.674;QD=8.18;ReadPosRankSum=-1.009;VQSLOD=1.6863;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:1:2.04:0,2,6	0/0:3,0:1:2.98:0,3,22	./.	./.	1/1:3,0:3:5.91:53,6,0	0/1:20,0:12:4.06:4,0,141	0/0:21,0:17:32.25:0,32,647	1/1:14,0:8:2.37:8,2,0	1/1:12,1:12:20.99:436,21,0	0/0:11,0:9:9.03:0,9,178	./.	0/0:20,0:18:30.08:0,30,1295	0/0:20,0:15:29.91:0,30,450	1/1:15,1:13:12.23:254,12,0	0/0:3,0:2:4.81:0,5,29	0/1:14,0:13:16.31:16,0,199	0/1:4,0:3:10.07:10,0,45	0/1:9,0:6:2.61:3,0,113	0/0:13,0:3:3.01:0,3,57	0/0:3,0:3:4.62:0,5,20	0/0:25,0:13:6.49:0,6,137	0/0:17,0:15:27.96:0,28,1064	0/0:8,0:6:8.99:0,9,151	0/0:27,0:21:25.14:0,25,1151	1/1:8,4:10:11.90:222,12,0	0/0:8,0:3:6.02:0,6,89	0/0:3,0:2:2.84:0,3,22	0/0:2,0:2:3.01:0,3,72
chr10	54103263	.	GGTA	G	847.47	PASS	AB=0.888;AC=20;AF=0.417;AN=48;BaseQRankSum=6.239;DP=349;FS=17.785;HRun=0;HaplotypeScore=53.4244;InbreedingCoeff=0.2500;MQ=28.49;MQ0=60;MQRankSum=-3.296;QD=5.58;ReadPosRankSum=4.262;VQSLOD=-0.1294;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:13,2:12:20.98:21,0,31	1/1:3,0:3:2.80:7,3,0	0/0:37,0:6:6.55:0,7,148	0/0:48,0:3:8.37:0,8,63	0/0:3,0:3:3.01:0,3,43	0/1:16,1:11:23.91:24,0,29	0/1:14,1:11:29.39:37,0,29	0/0:15,0:6:2.90:0,3,16	0/1:10,2:12:29.35:127,0,29	0/1:7,0:4:1.18:1,0,27	./.	0/1:11,8:18:77.60:78,0,378	1/1:9,6:9:11.69:93,12,0	1/1:13,5:15:5.87:78,6,0	1/1:0,3:2:3.01:47,3,0	1/1:11,3:13:16.66:234,17,0	1/1:2,3:5:8.96:68,9,0	1/1:6,3:7:15.01:190,15,0	0/0:15,1:7:10.27:0,10,125	0/0:1,0:1:2.84:0,3,14	0/0:23,4:16:5.60:0,6,44	0/0:7,0:6:12.01:0,12,201	./.	0/0:20,3:21:30.02:0,30,512	0/0:10,0:8:5.19:0,5,25	./.	0/0:4,0:4:3.83:0,4,20	./.
chr10	54103327	.	GTGA	G	594.93	PASS	AB=0.842;AC=8;AF=0.143;AN=56;BaseQRankSum=3.547;DP=537;FS=7.190;HRun=0;HaplotypeScore=82.7839;InbreedingCoeff=0.0591;MQ=36.38;MQ0=54;MQRankSum=-1.759;QD=5.41;ReadPosRankSum=0.318;VQSLOD=1.1654;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:17:5.94:0,6,67	0/1:8,0:7:11.29:11,0,14	0/0:28,0:8:17.62:0,18,240	0/0:45,0:9:22.49:0,22,186	1/1:3,4:5:6.02:93,6,0	0/0:18,0:15:18.72:0,19,305	0/0:24,0:17:48.15:0,48,914	0/0:40,0:27:35.65:0,36,642	0/1:9,13:21:25.23:126,0,25	0/0:10,0:7:8.98:0,9,89	0/0:5,0:5:3:0,3,25	0/0:33,0:30:58.84:0,59,1029	0/0:27,0:24:50.31:0,50,795	0/1:10,12:20:17.75:204,0,18	0/1:22,0:20:6.30:202,0,6	0/1:15,0:13:53.41:53,0,148	0/0:10,0:10:21.07:0,21,318	0/0:13,0:12:27.09:0,27,455	0/0:16,0:11:18.01:0,18,203	0/0:7,0:2:2.96:0,3,20	0/0:54,0:46:28.90:0,29,312	0/0:13,0:12:11.96:0,12,162	0/0:8,0:6:5.86:0,6,81	0/0:29,0:27:50.91:0,51,966	0/1:10,4:11:19.51:38,0,20	0/0:18,0:12:23.89:0,24,230	0/0:8,0:7:8.94:0,9,122	0/0:2,0:2:6.02:0,6,127
chr10	54103336	.	ATGG	A	603.33	PASS	AB=0.898;AC=7;AF=0.130;AN=54;BaseQRankSum=4.839;DP=608;FS=11.193;HRun=0;HaplotypeScore=91.6321;InbreedingCoeff=-0.1367;MQ=36.22;MQ0=63;MQRankSum=-2.913;QD=3.89;ReadPosRankSum=2.928;VQSLOD=1.0860;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:20:9.81:0,10,66	0/1:6,2:7:16.60:28,0,17	0/0:25,0:8:6.02:0,6,87	0/1:40,0:9:2.98:3,0,67	0/1:8,0:6:14:43,0,14	0/0:23,0:19:26.88:0,27,331	0/0:34,0:22:63.11:0,63,1015	0/0:48,0:30:45.64:0,46,522	0/1:29,0:28:30.48:30,0,126	0/0:12,0:9:11.81:0,12,124	./.	0/0:40,0:35:63.15:0,63,1025	0/0:30,0:27:41.90:0,42,696	0/1:26,0:23:38.74:99,0,39	0/1:14,11:22:8.43:409,0,8	0/1:14,4:16:99:114,0,235	0/0:12,0:12:26.94:0,27,282	0/0:18,0:17:41.88:0,42,567	0/0:16,0:10:10:0,10,78	0/0:8,0:3:6.02:0,6,73	0/0:61,0:46:22.77:0,23,192	0/0:14,0:13:9.02:0,9,132	0/0:8,0:6:2.88:0,3,44	0/0:34,0:32:62.88:0,63,1027	0/0:13,0:10:5.38:0,5,54	0/0:20,0:12:11.97:0,12,137	0/0:6,0:5:6:0,6,61	0/0:3,0:3:9.02:0,9,150
chr10	54103396	.	ATGGTGG	A	764.80	PASS	AB=0.924;AC=10;AF=0.185;AN=54;BaseQRankSum=7.365;DP=670;FS=73.034;HRun=0;HaplotypeScore=132.6162;InbreedingCoeff=0.3798;MQ=36.47;MQ0=105;MQRankSum=-7.515;QD=6.32;ReadPosRankSum=-0.081;VQSLOD=-0.4943;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:12:4.25:0,4,38	0/1:8,2:10:29.84:108,0,30	0/0:3,0:1:2.80:0,3,13	./.	0/0:10,0:8:18.04:0,18,306	0/0:25,0:19:14.71:0,15,208	0/0:41,0:27:39:0,39,561	0/0:30,0:5:2.96:0,3,19	0/0:38,0:35:59.89:0,60,1220	0/0:23,0:15:17.46:0,17,269	0/0:12,0:8:2.98:0,3,82	0/0:52,0:44:72:0,72,1634	0/0:36,0:29:48.33:0,48,1062	0/0:50,0:40:61.66:0,62,1171	1/1:39,7:38:21.35:355,21,0	0/1:26,5:31:99:303,0,159	0/0:7,0:7:8.08:0,8,47	0/0:15,0:12:5.94:0,6,89	1/1:14,0:7:5.98:47,6,0	0/0:8,0:3:5.88:0,6,36	0/0:54,0:31:8.85:0,9,94	0/0:19,0:11:14.91:0,15,248	0/1:7,0:5:0.20:0,0,1	0/0:58,0:55:99:0,99,2066	0/0:19,0:18:29.83:0,30,554	0/0:22,0:19:20.96:0,21,272	1/1:1,0:4:8.98:73,9,0	0/1:7,0:7:19.83:20,0,345
chr10	54103429	.	GTGA	G	1388.55	PASS	AB=0.912;AC=17;AF=0.315;AN=54;BaseQRankSum=9.150;DP=575;FS=33.279;HRun=0;HaplotypeScore=99.0527;InbreedingCoeff=0.4911;MQ=42.23;MQ0=51;MQRankSum=-3.027;QD=7.08;ReadPosRankSum=-1.400;VQSLOD=1.0966;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:21,0:18:35.65:193,0,36	1/1:5,2:7:6.02:83,6,0	0/0:31,0:17:26.28:0,26,647	0/0:36,0:15:42.09:0,42,588	0/0:8,0:8:15.05:0,15,277	0/0:14,0:12:21.07:0,21,420	0/0:30,0:23:42.14:0,42,821	1/1:16,0:9:5.72:62,6,0	0/0:33,0:31:68.70:0,69,1244	0/0:13,0:12:18.05:0,18,281	0/0:5,0:4:6.02:0,6,122	0/0:37,0:32:59.78:0,60,1087	0/0:32,0:29:66.11:0,66,1235	0/0:39,1:33:14.23:0,14,932	1/1:18,13:24:12.04:171,12,0	0/1:14,16:29:6.79:349,0,7	1/1:6,0:6:6.39:42,6,0	0/1:13,0:13:6.16:52,0,6	1/1:10,0:8:12.82:139,13,0	./.	0/1:43,0:30:89.82:148,0,90	0/0:14,0:12:21.07:0,21,410	0/0:2,0:1:3.01:0,3,46	0/0:53,0:51:93.29:0,93,1737	0/0:16,0:15:24.08:0,24,458	0/1:9,1:9:24.90:25,0,243	1/1:8,0:9:24.54:302,25,0	0/0:13,0:11:21.06:0,21,336
chr10	54103449	.	GATA	G	443.57	PASS	AB=0.954;AC=10;AF=0.179;AN=56;BaseQRankSum=9.765;DP=581;FS=35.788;HRun=0;HaplotypeScore=112.5344;InbreedingCoeff=0.0522;MQ=63.91;MQ0=10;MQRankSum=-6.140;QD=2.66;ReadPosRankSum=5.987;VQSLOD=-0.1618;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:26:78.67:79,0,88	1/1:6,0:6:5.98:46,6,0	0/0:49,0:35:96.59:0,97,1436	0/0:50,0:30:83.33:0,83,1326	0/0:7,0:7:15.05:0,15,341	0/0:17,0:16:39.06:0,39,661	0/0:29,0:25:66.14:0,66,1244	0/0:14,0:14:7.85:0,8,221	0/0:32,0:31:80.29:0,80,1719	0/0:13,0:13:30.02:0,30,401	0/0:2,0:2:6.02:0,6,142	0/0:35,0:34:82.43:0,82,1519	0/0:33,0:33:84.05:0,84,1699	0/0:40,0:39:68.58:0,69,1364	0/1:25,0:22:58.69:59,0,98	0/1:19,0:18:8.23:186,0,8	0/1:6,0:6:26.75:27,0,54	0/1:8,5:13:54.32:54,0,95	0/1:12,1:13:20.64:21,0,181	0/0:3,0:3:2.97:0,3,20	0/1:46,1:42:1.46:1,0,225	0/0:10,0:10:24.07:0,24,534	0/0:4,0:4:12:0,12,143	0/0:43,0:43:99:0,108,2310	0/0:14,0:14:30.05:0,30,581	0/0:10,0:10:10.98:0,11,421	0/1:10,0:9:3.56:110,0,4	0/0:9,0:8:24.02:0,24,437
chr10	54103772	.	T	TAAT	2702.65	PASS	AB=1.000;AC=29;AF=0.558;AN=52;BaseQRankSum=5.330;DP=247;FS=13.087;HRun=0;HaplotypeScore=62.8442;InbreedingCoeff=0.2521;MQ=64.53;MQ0=0;MQRankSum=-3.114;QD=15.18;ReadPosRankSum=4.084;VQSLOD=1.5666;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:13,0:13:19.52:20,0,41	1/1:4,0:4:8.96:97,9,0	0/1:2,0:2:23.46:23,0,26	0/0:8,0:8:5.99:0,6,49	0/1:8,0:8:18.32:53,0,18	1/1:21,0:21:45.14:856,45,0	1/1:9,0:9:14.99:189,15,0	0/0:37,0:37:75.12:0,75,774	0/1:4,0:4:11.11:11,0,25	1/1:6,0:6:11.94:94,12,0	1/1:5,0:5:6.02:120,6,0	0/0:4,0:4:9.01:0,9,96	0/0:8,0:8:18.04:0,18,241	0/0:2,0:2:5.85:0,6,33	1/1:7,0:7:11.98:134,12,0	1/1:3,0:3:5.97:61,6,0	1/1:22,0:22:4.67:157,5,0	0/1:15,0:15:18.26:122,0,18	0/1:11,0:11:56.33:60,0,56	./.	0/1:2,0:2:0.02:0,0,0	./.	0/0:5,0:5:9.02:0,9,112	0/0:4,0:4:9.02:0,9,114	0/1:13,0:13:39.07:39,0,69	1/1:9,0:9:27.04:437,27,0	0/1:11,0:11:4.45:4,0,74	1/1:8,4:13:24.02:399,24,0
chr10	54103781	.	T	TAA	1669.61	PASS	AB=0.769;AC=21;AF=0.389;AN=54;BaseQRankSum=6.053;DP=240;FS=4.290;HRun=2;HaplotypeScore=62.1662;InbreedingCoeff=0.3169;MQ=58.45;MQ0=0;MQRankSum=0.649;QD=16.86;ReadPosRankSum=5.415;VQSLOD=1.3347;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:14.37:0,14,118	0/1:2,2:4:5.64:83,0,6	0/1:3,0:3:23.46:23,0,26	0/0:5,0:4:5.99:0,6,49	0/1:8,0:8:2.89:24,0,3	0/1:8,13:21:13.89:536,0,14	1/1:4,2:6:0.32:69,0,0	0/0:42,0:42:99:0,126,1868	1/1:3,0:3:0.34:27,0,0	1/1:4,0:4:8.31:43,8,0	0/1:1,2:3:10.88:69,0,11	0/0:3,0:3:9.02:0,9,123	0/0:7,0:7:21.05:0,21,312	1/1:2,0:2:3.37:9,3,0	1/1:3,2:5:7.80:121,8,0	0/1:2,1:3:3.60:83,0,4	0/0:22,0:22:29.53:0,30,244	0/0:18,0:18:29.92:0,30,258	0/0:11,0:11:32.36:0,32,341	0/0:1,0:1:3:0,3,25	0/0:2,0:2:3.01:0,3,34	./.	0/0:3,0:3:9.02:0,9,123	0/0:4,0:4:12.04:0,12,190	1/1:13,0:13:11.31:147,11,0	1/1:3,6:9:26.88:334,27,0	0/0:10,0:10:14.64:0,15,139	0/1:10,5:15:21.05:268,0,21
chr10	54103782	.	T	TA	457.25	PASS	AB=0.819;AC=9;AF=0.173;AN=52;BaseQRankSum=4.629;DP=240;FS=4.540;HRun=1;HaplotypeScore=62.5484;InbreedingCoeff=0.0044;MQ=57.90;MQ0=0;MQRankSum=1.407;QD=7.03;ReadPosRankSum=6.322;VQSLOD=0.8905;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:11.63:0,12,95	0/1:4,0:4:7.46:7,0,28	0/1:2,0:2:0:0,0,0	./.	0/0:8,0:8:21.08:0,21,110	0/1:7,13:20:26.01:260,0,26	0/1:5,2:7:15.82:16,0,28	0/0:43,0:43:99:0,126,1602	0/0:3,0:3:8.64:0,9,46	0/0:4,0:4:6.20:0,6,24	0/1:1,2:3:9.85:35,0,10	0/0:3,0:3:6.02:0,6,78	0/0:7,0:7:18.06:0,18,234	0/0:2,0:2:5.68:0,6,28	0/1:5,0:5:0.06:0,0,18	0/0:3,0:3:0.35:0,0,27	0/0:23,0:23:27.63:0,28,162	0/0:18,0:18:29.33:0,29,195	0/0:11,0:11:32.67:0,33,326	0/0:1,0:1:3.01:0,3,38	0/0:2,0:2:3.01:0,3,38	./.	0/0:3,0:3:6.02:0,6,78	0/0:4,0:4:12.04:0,12,156	0/0:13,0:13:33.33:0,33,162	1/1:3,6:9:1.73:141,2,0	0/0:11,0:11:11.73:0,12,90	0/1:10,5:15:43.70:113,0,44
chr10	54103785	.	T	TATTATC	2134.29	PASS	AB=1.000;AC=25;AF=0.500;AN=50;BaseQRankSum=-1.376;DP=239;FS=10.839;HRun=0;HaplotypeScore=75.2762;InbreedingCoeff=0.1074;MQ=55.60;MQ0=0;MQRankSum=1.702;QD=11.00;ReadPosRankSum=3.278;VQSLOD=1.0337;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:1,11:14:8.98:265,9,0	0/1:4,0:4:8.98:64,0,9	./.	./.	0/0:8,0:8:12.04:0,12,198	0/1:21,0:21:80.55:145,0,81	0/1:7,0:7:23.38:23,0,55	0/1:44,0:44:99:299,0,654	0/0:5,0:5:6.02:0,6,124	0/1:5,0:5:19.58:20,0,33	0/1:3,0:3:13.46:17,0,13	0/0:2,0:2:6.01:0,6,97	0/0:6,0:6:18.06:0,18,397	0/0:2,0:2:6.02:0,6,124	0/1:4,0:4:31.45:72,0,31	0/1:3,0:3:29.03:41,0,29	1/1:22,0:22:26.98:230,27,0	1/1:18,0:18:24:208,24,0	1/1:3,9:12:14.07:612,14,0	1/1:1,0:1:3:25,3,0	1/1:2,0:2:2.90:16,3,0	./.	0/0:2,0:2:6.02:0,6,138	0/0:4,0:4:9.03:0,9,206	0/0:13,0:13:27.09:0,27,500	1/1:9,0:9:5.87:97,6,0	1/1:1,7:9:3.01:105,3,0	0/1:16,0:16:40.14:60,0,40
chr10	54103788	.	T	TATC	2096.65	PASS	AB=1.000;AC=24;AF=0.462;AN=52;BaseQRankSum=-1.286;DP=242;FS=22.763;HRun=0;HaplotypeScore=64.4181;InbreedingCoeff=0.3370;MQ=55.75;MQ0=0;MQRankSum=1.452;QD=11.21;ReadPosRankSum=4.127;VQSLOD=1.3920;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:11:4.88:84,5,0	1/1:2,0:4:6.49:66,6,0	0/0:2,0:2:5.97:0,6,46	./.	0/0:9,0:9:12.38:0,12,120	0/1:21,0:21:92.01:92,0,195	0/1:7,0:7:4.53:5,0,103	0/1:46,0:46:99:296,0,311	0/0:5,0:5:6.02:0,6,82	0/0:5,0:5:11.74:0,12,81	0/1:3,0:3:21.22:21,0,28	0/0:3,0:3:9.02:0,9,106	0/0:7,0:7:18.06:0,18,304	0/0:3,0:3:6.02:0,6,82	1/1:5,0:6:10.06:94,10,0	1/1:3,0:3:3.33:22,3,0	1/1:0,24:24:27.09:617,27,0	1/1:0,17:17:24.08:552,24,0	1/1:10,0:10:21.36:275,21,0	0/0:1,0:1:3:0,3,26	1/1:2,0:2:5.91:65,6,0	./.	0/0:2,0:2:6.02:0,6,102	0/0:4,0:4:9.03:0,9,150	0/0:11,0:11:26.95:0,27,321	0/1:8,0:8:13.01:13,0,27	1/1:8,0:8:3.01:44,3,0	0/1:17,0:17:26.93:27,0,122
chr10	54103818	.	TTGA	T	600.06	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=4.213;DP=299;FS=9.074;HRun=0;HaplotypeScore=68.8634;InbreedingCoeff=0.8292;MQ=76.92;MQ0=0;MQRankSum=-5.382;QD=33.34;ReadPosRankSum=-0.120;VQSLOD=3.4913;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:21.07:0,21,456	1/1:2,3:5:12.03:171,12,0	0/0:11,0:11:30.10:0,30,628	0/0:8,0:6:5.33:0,5,251	0/0:13,0:13:39.13:0,39,837	0/0:25,0:25:69.24:0,69,1492	0/0:6,0:6:18.06:0,18,383	0/0:38,0:38:99:0,105,2124	0/0:7,0:7:21.07:0,21,468	0/0:10,0:10:30.07:0,30,587	0/0:4,0:4:6.02:0,6,134	0/0:6,0:6:18.06:0,18,402	0/0:13,0:13:39.13:0,39,853	0/0:7,0:7:21.07:0,21,462	1/1:0,7:7:21:296,21,0	1/1:1,5:6:18.05:269,18,0	0/0:23,0:23:39.13:0,39,862	0/0:18,0:18:33.11:0,33,720	0/0:9,0:9:27.09:0,27,602	0/0:8,0:8:24.08:0,24,530	0/0:3,0:3:6.02:0,6,134	0/0:3,0:3:9.02:0,9,159	0/0:5,0:5:15.05:0,15,335	0/0:3,0:3:9.03:0,9,201	0/0:13,0:13:36.12:0,36,768	0/0:9,0:9:27.08:0,27,563	0/0:14,0:14:27.06:0,27,512	0/0:12,0:12:36.12:0,36,800
chr10	54103893	.	C	CA	1524.15	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-4.110;DP=445;FS=24.649;HRun=0;HaplotypeScore=44.0533;InbreedingCoeff=0.9871;MQ=93.53;MQ0=1;MQRankSum=-3.583;QD=42.34;ReadPosRankSum=2.265;VQSLOD=1.6487;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:57.18:0,57,776	1/1:0,5:5:15.05:229,15,0	0/0:28,0:28:78.21:0,78,1051	0/0:11,0:11:33.11:0,33,452	0/0:17,0:17:51.16:0,51,694	0/0:26,0:25:75.20:0,75,1010	0/0:16,0:16:48.15:0,48,654	0/0:39,0:39:99:0,111,1492	0/0:9,0:9:24.08:0,24,336	0/0:14,0:14:36.12:0,36,490	0/0:10,0:10:30.09:0,30,404	0/0:12,0:12:33.10:0,33,444	0/0:19,0:19:57.15:0,57,732	0/0:18,0:18:51.17:0,51,713	1/1:0,16:16:48.16:766,48,0	1/1:0,15:15:45.08:669,45,0	0/0:18,0:18:51.13:0,51,677	0/0:19,0:19:57.19:0,57,797	0/0:14,0:14:42.14:0,42,583	0/0:16,0:16:48.16:0,48,671	0/0:16,0:16:47.82:0,48,614	0/0:11,0:11:30.09:0,30,402	0/0:13,0:13:39.11:0,39,508	0/0:10,0:10:30.10:0,30,419	0/0:14,0:14:42.14:0,42,586	0/0:12,0:12:36.12:0,36,503	0/0:22,0:22:66.21:0,66,906	0/0:5,0:5:15.05:0,15,206
chr10	54105832	.	TAGGTGGTTTGTCTAGGTGGTG	T	49246.68	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=17.061;DP=673;FS=1.098;HRun=0;HaplotypeScore=412.2247;InbreedingCoeff=0.9535;MQ=66.14;MQ0=0;MQRankSum=-16.422;QD=101.96;ReadPosRankSum=5.453;VQSLOD=3.4160;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,20:30:45.15:2471,45,0	1/1:3,8:11:21.07:1230,21,0	0/0:21,0:21:57.19:0,57,3419	0/0:14,0:14:27.96:0,28,1957	1/1:5,20:25:48.64:2788,49,0	1/1:4,23:27:63.22:3673,63,0	1/1:9,9:18:27.09:1495,27,0	1/1:8,10:18:30.06:1072,30,0	1/1:6,18:24:54.19:3163,54,0	1/1:4,24:28:69.20:3028,69,0	1/1:4,14:18:27.09:1581,27,0	0/0:42,0:42:99:0,126,11181	0/0:37,0:37:99:0,105,9266	1/1:11,27:38:63.22:3672,63,0	1/1:15,19:34:48.16:2811,48,0	1/1:7,14:21:42.14:2460,42,0	1/1:10,4:14:9.03:527,9,0	1/1:4,15:19:36.12:2106,36,0	1/1:6,11:17:30.10:1545,30,0	1/1:6,22:28:60.21:3407,60,0	1/1:6,11:17:13.80:771,14,0	0/0:23,0:23:66.23:0,66,5494	0/0:23,0:23:66.21:0,66,5426	0/0:30,0:30:90.31:0,90,7697	1/1:7,15:22:45.15:2636,45,0	1/1:8,25:33:75.24:4241,75,0	1/1:9,30:39:75.26:4392,75,0	1/1:0,2:2:3.01:176,3,0
chr10	54106586	.	CACAAA	C	2478.25	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=6.479;DP=579;FS=2.832;HRun=0;HaplotypeScore=140.7716;InbreedingCoeff=0.9830;MQ=72.72;MQ0=2;MQRankSum=-8.195;QD=55.07;ReadPosRankSum=0.644;VQSLOD=3.9387;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:90.29:0,90,2743	1/1:2,11:13:33.11:716,33,0	0/0:21,0:17:10.21:0,10,1145	0/0:16,0:14:35.71:0,36,855	0/0:28,0:28:78.25:0,78,2400	0/0:22,0:22:63.12:0,63,1994	0/0:24,0:24:69.22:0,69,2061	0/0:31,0:31:90.30:0,90,2721	0/0:17,0:17:51.18:0,51,1539	0/0:27,0:26:75.26:0,75,2331	0/0:21,0:21:57.18:0,57,1671	0/0:20,0:20:60.21:0,60,1876	0/0:18,0:18:51.18:0,51,1610	0/0:24,0:24:72.25:0,72,2260	1/1:3,12:16:45.14:929,45,0	1/1:1,15:16:45.15:976,45,0	0/0:27,0:27:72.25:0,72,2246	0/0:9,0:9:24.08:0,24,680	0/0:22,0:22:63.22:0,63,1958	0/0:23,0:23:66.23:0,66,2041	0/0:14,0:14:39.13:0,39,1233	0/0:15,0:15:39.13:0,39,1215	0/0:15,0:15:45.15:0,45,1413	0/0:19,0:19:54.19:0,54,1700	0/0:23,0:23:69.24:0,69,2185	0/0:27,0:27:78.26:0,78,2400	0/0:24,0:24:69.24:0,69,2155	0/0:14,0:14:36.12:0,36,1136
chr10	54106599	.	CTT	C	4539.55	PASS	AB=0.553;AC=22;AF=0.393;AN=56;BaseQRankSum=0.648;DP=611;FS=1.554;HRun=12;HaplotypeScore=106.7881;InbreedingCoeff=0.7084;MQ=69.48;MQ0=2;MQRankSum=-0.384;QD=16.15;ReadPosRankSum=2.907;VQSLOD=3.9941;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:33:50.19:0,50,198	1/1:3,10:13:27.02:274,27,0	0/0:22,0:18:34:0,34,341	0/0:11,0:8:14.30:0,14,116	0/1:3,4:31:51.81:52,0,147	1/1:3,22:25:62.25:639,62,0	1/1:1,18:19:54.09:541,54,0	0/0:26,0:30:60.16:0,60,791	0/0:18,0:19:54.17:0,54,769	1/1:5,21:25:60.11:610,60,0	1/1:1,18:20:47.79:470,48,0	0/0:21,0:21:60.18:0,60,855	0/0:18,0:22:50.11:0,50,622	0/0:25,0:26:62.68:0,63,881	1/1:5,13:19:23.79:296,24,0	1/1:1,18:19:54.11:549,54,0	0/1:5,3:25:39.73:40,0,103	0/0:1,0:10:22.46:0,22,79	0/1:5,2:25:6.63:7,0,181	0/0:4,1:26:28.71:0,29,200	0/1:4,2:15:32.05:32,0,86	0/0:18,0:19:45.88:0,46,618	0/0:14,0:16:44.61:0,45,577	0/0:16,0:17:41.61:0,42,570	0/0:27,0:29:74.69:0,75,1040	1/1:6,24:30:72.08:725,72,0	0/0:8,1:26:18.04:0,18,159	1/1:2,12:14:30.06:305,30,0
chr10	54108247	.	GTCAAAGGTTGC	G	6703.18	PASS	AB=0.532;AC=5;AF=0.089;AN=56;BaseQRankSum=9.510;DP=714;FS=7.254;HRun=0;HaplotypeScore=255.0951;InbreedingCoeff=0.7793;MQ=71.67;MQ0=1;MQRankSum=-12.353;QD=89.38;ReadPosRankSum=4.240;VQSLOD=3.4909;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,123,6520	1/1:1,15:16:48.16:1609,48,0	0/0:16,0:16:45.15:0,45,1811	0/0:9,0:8:24.08:0,24,1242	0/0:31,0:31:93.32:0,93,4944	0/0:22,0:22:63.22:0,63,3399	0/0:29,0:29:75.09:0,75,3967	0/0:23,0:23:69.24:0,69,3547	0/0:22,0:22:54.19:0,54,2976	0/0:22,0:21:48.16:0,48,2493	0/0:20,0:20:60.19:0,60,3099	0/0:34,0:34:99:0,99,5392	0/0:35,0:35:99:0,105,5960	0/0:34,0:34:87.28:0,87,4442	1/1:6,20:26:63.22:2146,63,0	0/1:4,29:33:71.15:2949,0,71	0/0:27,0:27:66.23:0,66,3448	0/0:10,0:10:27.09:0,27,1386	0/0:27,0:27:72.25:0,72,3520	0/0:39,0:39:99:0,114,6329	0/0:28,0:28:78.27:0,78,4011	0/0:24,0:24:66.23:0,66,3543	0/0:19,0:19:57.20:0,57,3229	0/0:18,0:18:51.18:0,51,2906	0/0:28,0:28:84.29:0,84,4541	0/0:32,0:32:90.31:0,90,4939	0/0:28,0:28:72.22:0,72,3307	0/0:13,0:13:39.13:0,39,1944
chr10	54108283	.	CTTT	C	8767.50	PASS	AB=0.573;AC=27;AF=0.482;AN=56;BaseQRankSum=-6.138;DP=722;FS=2.201;HRun=13;HaplotypeScore=151.0535;InbreedingCoeff=0.7743;MQ=70.22;MQ0=2;MQRankSum=-2.521;QD=21.92;ReadPosRankSum=1.603;VQSLOD=2.7010;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,36:41:99:1203,102,0	0/0:4,0:17:16.20:0,16,37	0/0:27,0:19:29.68:0,30,502	0/0:13,0:11:18.01:0,18,248	1/1:3,24:27:63.12:762,63,0	0/0:6,0:22:9.38:0,9,30	0/1:4,2:29:27.49:42,0,27	1/1:11,28:39:78:917,78,0	1/1:2,23:25:57.17:693,57,0	0/1:7,1:18:13.20:13,0,64	0/0:2,0:20:23.40:0,23,83	0/0:38,0:38:99:0,102,1796	0/0:32,0:33:84.25:0,84,1476	1/1:7,27:34:66.13:802,66,0	0/1:6,1:23:11.81:12,0,41	0/0:7,0:34:14.64:0,15,50	1/1:4,20:25:42.02:492,42,0	1/1:2,7:9:15.03:182,15,0	1/1:4,19:23:51.03:603,51,0	1/1:2,29:31:78.13:930,78,0	1/1:4,21:25:57.11:693,57,0	0/0:26,0:30:75.19:0,75,1288	0/0:17,0:19:45.96:0,46,731	0/0:18,0:18:48.16:0,48,907	1/1:4,20:24:57.14:693,57,0	0/0:5,0:37:30.34:0,30,98	1/1:3,22:25:60.16:729,60,0	0/0:2,0:14:12.46:0,12,29
chr10	54109257	.	G	GTCCA	4206.11	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-1.832;DP=803;FS=0.936;HRun=0;HaplotypeScore=163.5585;InbreedingCoeff=0.9431;MQ=70.06;MQ0=1;MQRankSum=-6.626;QD=24.17;ReadPosRankSum=-4.060;VQSLOD=2.9502;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:89.24:0,89,1267	1/1:2,0:6:3.01:52,3,0	0/0:39,0:39:7.34:0,7,124	0/0:22,0:21:15.90:0,16,284	0/0:26,0:26:45.15:0,45,729	0/0:33,0:33:72.01:0,72,1028	0/0:37,0:37:76.35:0,76,951	1/1:24,15:40:60:903,60,0	0/0:33,0:33:60.18:0,60,921	0/0:24,0:24:51.11:0,51,785	0/0:18,0:18:39.13:0,39,629	0/0:48,0:48:99:0,99,1510	0/0:32,0:32:66.17:0,66,968	0/0:27,0:27:45.14:0,45,701	1/1:16,0:39:35.79:574,36,0	1/1:15,0:37:48.13:784,48,0	1/1:8,27:35:48.16:1165,48,0	1/1:4,12:15:30.10:728,30,0	0/0:22,0:22:30.09:0,30,454	0/0:19,0:19:39.12:0,39,599	0/0:34,0:34:63.13:0,63,880	0/0:19,0:19:36.12:0,36,583	0/0:23,0:23:48.15:0,48,757	0/0:33,0:33:78.13:0,78,1088	0/0:35,0:35:63.21:0,63,1017	0/0:30,0:30:57.18:0,57,884	0/0:22,0:22:42.07:0,42,577	0/0:9,0:9:18.06:0,18,282
chr10	54110264	.	A	AC	3068.27	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-12.224;DP=845;FS=6.023;HRun=0;HaplotypeScore=76.3400;InbreedingCoeff=0.9997;MQ=90.65;MQ0=0;MQRankSum=-4.789;QD=40.37;ReadPosRankSum=2.883;VQSLOD=4.4031;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,114,1577	1/1:0,10:10:30.10:479,30,0	0/0:33,0:33:99:0,99,1315	0/0:32,0:32:96.13:0,96,1176	0/0:38,0:38:99:0,114,1569	0/0:20,0:20:57.17:0,57,779	0/0:28,0:28:84.26:0,84,1156	0/0:35,0:35:99:0,105,1426	0/0:35,0:35:99:0,105,1452	0/0:36,0:36:99:0,108,1483	0/0:29,0:29:87.26:0,87,1169	0/0:32,0:32:96.31:0,96,1328	0/0:40,0:40:99:0,120,1625	0/0:32,0:32:96.31:0,96,1327	1/1:1,31:32:78.27:1246,78,0	1/1:0,34:34:93.32:1486,93,0	0/0:26,0:26:75.20:0,75,1005	0/0:16,0:16:44.68:0,45,626	0/0:24,0:24:72.23:0,72,988	0/0:31,0:31:93.27:0,93,1277	0/0:22,0:22:63.19:0,63,850	0/0:28,0:28:78.26:0,78,1088	0/0:37,0:37:99:0,111,1536	0/0:22,0:22:60.15:0,60,799	0/0:41,0:41:99:0,120,1677	0/0:29,0:29:84.26:0,84,1138	0/0:54,0:54:99:0,163,2249	0/0:11,0:11:33.11:0,33,461
chr10	54110573	.	G	GA	8202.40	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-8.728;DP=752;FS=6.589;HRun=7;HaplotypeScore=74.6260;InbreedingCoeff=0.9999;MQ=82.81;MQ0=0;MQRankSum=-0.513;QD=28.78;ReadPosRankSum=-1.806;VQSLOD=4.7220;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,38:40:96.24:1125,96,0	1/1:1,12:13:36.11:435,36,0	0/0:26,0:27:45.07:0,45,575	0/0:21,0:21:38.18:0,38,375	0/0:44,0:44:99:0,126,1209	0/0:41,0:41:99:0,114,1099	0/0:28,0:28:69.09:0,69,660	1/1:5,29:34:84.25:1002,84,0	0/0:26,0:26:63.10:0,63,608	0/0:33,0:33:90.14:0,90,869	0/0:28,0:28:78.12:0,78,753	0/0:26,0:26:75.09:0,75,713	0/0:26,0:26:75.10:0,75,718	0/0:20,0:20:45.04:0,45,427	1/1:6,23:29:66.20:797,66,0	1/1:3,24:27:34.10:680,34,0	1/1:1,23:24:66.18:782,66,0	1/1:2,14:16:36.11:435,36,0	1/1:3,20:23:57.17:681,57,0	1/1:2,24:26:69.17:815,69,0	1/1:2,23:25:60.18:725,60,0	0/0:30,0:30:87.14:0,87,840	0/0:31,0:31:87.14:0,87,840	0/0:22,0:22:60.10:0,60,579	0/0:27,0:27:72.11:0,72,695	0/0:23,0:23:56.99:0,57,531	1/1:5,23:28:37.22:726,37,0	0/0:14,0:14:39.06:0,39,377
chr10	54110740	.	A	AGAAGAAAAT	62501.91	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=-6.461;DP=743;FS=1.485;HRun=0;HaplotypeScore=182.0632;InbreedingCoeff=0.9985;MQ=72.63;MQ0=0;MQRankSum=-17.123;QD=108.70;ReadPosRankSum=-0.833;VQSLOD=5.2901;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:20,19:43:99:4034,102,0	1/1:2,13:16:45.15:2145,45,0	0/0:23,0:23:60.18:0,60,1431	0/0:20,0:20:22.39:0,22,985	1/1:8,22:35:87.21:3250,87,0	1/1:8,21:30:81.28:3717,81,0	1/1:13,10:26:66.23:2636,66,0	1/1:26,13:44:99:5427,129,0	1/1:9,16:25:69.24:3129,69,0	1/1:15,15:31:87.30:3710,87,0	1/1:6,13:19:54.19:2315,54,0	0/0:26,0:26:77.94:0,78,2126	0/0:28,0:28:78.27:0,78,2349	1/1:3,14:22:48.16:2300,48,0	1/1:13,20:39:93.17:3909,93,0	1/1:10,25:39:99:4600,99,0	1/1:7,10:21:42.14:1845,42,0	1/1:4,5:11:27.09:1167,27,0	1/1:10,5:21:60.18:2109,60,0	1/1:6,18:26:72.25:3270,72,0	1/1:10,7:25:33.11:1466,33,0	0/0:31,0:31:87.30:0,87,2609	0/0:15,0:15:42.13:0,42,1194	0/0:25,0:25:75.20:0,75,2081	1/1:2,26:34:78.27:3760,78,0	1/1:7,19:32:93.28:3747,93,0	1/1:6,18:27:66.23:3077,66,0	1/1:3,4:8:21.07:892,21,0
chr10	54111252	.	TG	T	5834.15	PASS	AB=0.545;AC=21;AF=0.375;AN=56;BaseQRankSum=-1.555;DP=603;FS=0.712;HRun=9;HaplotypeScore=76.1100;InbreedingCoeff=0.9294;MQ=80.55;MQ0=0;MQRankSum=-0.516;QD=21.85;ReadPosRankSum=4.536;VQSLOD=5.4758;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,22:27:66:604,66,0	0/0:3,0:4:5.78:0,6,32	0/0:18,0:18:21.15:0,21,301	0/0:14,0:14:20.28:0,20,183	1/1:4,15:19:45.01:411,45,0	0/0:3,0:20:34.12:0,34,173	0/0:6,0:17:34.45:0,34,194	0/0:34,2:36:23.31:0,23,666	1/1:3,15:19:39.43:452,39,0	0/0:12,0:24:34.33:0,34,194	0/0:8,0:18:25.66:0,26,140	0/0:20,0:20:57.15:0,57,641	0/0:24,0:24:66.18:0,66,753	1/1:2,25:27:72.04:659,72,0	0/0:8,0:18:19.89:0,20,100	0/0:15,0:21:20.11:0,20,111	0/1:5,25:30:3.26:483,0,3	1/1:5,17:22:51.02:467,51,0	1/1:5,19:24:57:515,57,0	1/1:3,19:22:59.99:541,60,0	1/1:1,24:25:69.04:632,69,0	0/0:23,0:23:29.09:0,29,543	0/0:23,0:23:69.20:0,69,796	0/0:20,0:20:45.13:0,45,519	1/1:3,18:21:57.02:521,57,0	0/0:9,0:22:34.39:0,34,192	1/1:6,25:31:60.02:549,60,0	0/0:3,0:13:28.70:0,29,157
chr10	54111747	.	GTGCCTA	G	7920.09	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=10.529;DP=789;FS=1.668;HRun=0;HaplotypeScore=174.2150;InbreedingCoeff=0.9967;MQ=90.23;MQ0=0;MQRankSum=-14.818;QD=57.39;ReadPosRankSum=0.668;VQSLOD=5.1988;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:40:99:0,117,4050	0/0:14,0:14:42.14:0,42,1514	0/0:39,0:39:99:0,114,3600	0/0:27,0:27:75.15:0,75,2228	0/0:12,0:12:33.11:0,33,1156	1/1:0,21:21:57.20:1367,57,0	1/1:2,23:25:51.18:1205,51,0	0/0:28,0:28:84.26:0,84,2634	0/0:23,0:23:69.24:0,69,2369	1/1:1,31:32:84.29:1998,84,0	1/1:1,19:20:36.12:863,36,0	0/0:34,0:34:99:0,99,3516	0/0:36,0:36:99:0,105,3625	0/0:35,0:35:99:0,99,3427	0/0:34,0:34:96.32:0,96,3210	0/0:46,0:46:99:0,138,4913	0/0:24,0:24:72.25:0,72,2491	0/0:20,0:20:60.21:0,60,2105	0/0:32,0:32:93.29:0,93,3146	0/0:35,0:35:99:0,102,3623	0/0:33,0:33:99:0,99,3519	0/0:31,0:31:93.28:0,93,2970	0/0:29,0:29:87.30:0,87,3066	0/0:25,0:25:75.26:0,75,2616	0/0:28,0:28:81.28:0,81,2920	1/1:5,30:35:90.31:2126,90,0	0/0:25,0:25:75.26:0,75,2682	1/1:0,5:5:15.05:360,15,0
chr10	54112739	.	AAGGGAGGATCTCTTTGGCTCAC	A	8640.18	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=11.414;DP=886;FS=3.433;HRun=0;HaplotypeScore=495.2777;InbreedingCoeff=0.9971;MQ=82.46;MQ0=0;MQRankSum=-11.399;QD=137.15;ReadPosRankSum=4.350;VQSLOD=3.7669;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,141,12970	1/1:2,7:9:18.06:1102,18,0	0/0:37,0:37:96.31:0,96,6362	0/0:32,0:32:93.32:0,93,5769	0/0:32,0:32:93.32:0,93,9003	0/0:30,0:30:87.30:0,87,7601	0/0:35,0:35:99:0,102,9269	0/0:37,0:37:99:0,108,8693	0/0:31,0:31:93.31:0,93,8112	0/0:38,0:38:99:0,111,9669	0/0:25,0:25:75.26:0,75,6977	0/0:37,0:37:99:0,111,10698	0/0:36,0:36:99:0,102,10097	0/0:36,0:36:99:0,102,9176	1/1:8,25:33:69.24:4230,69,0	1/1:2,19:21:54.02:3309,54,0	0/0:53,0:53:99:0,151,13663	0/0:22,0:22:66.23:0,66,6495	0/0:22,0:22:66.23:0,66,4928	0/0:45,0:45:99:0,129,11963	0/0:36,0:36:99:0,105,9222	0/0:27,0:27:81.27:0,81,6954	0/0:25,0:25:69.24:0,69,5904	0/0:27,0:27:78.27:0,78,7760	0/0:28,0:28:81.26:0,81,7673	0/0:31,0:31:93.32:0,93,9033	0/0:24,0:24:66.23:0,66,6374	0/0:28,0:28:84.29:0,84,7754
chr10	54113433	.	CA	C	7487.87	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=14.723;DP=803;FS=18.448;HRun=4;HaplotypeScore=78.5418;InbreedingCoeff=0.9998;MQ=89.11;MQ0=0;MQRankSum=-1.750;QD=30.44;ReadPosRankSum=1.477;VQSLOD=3.1673;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,135,1853	0/0:14,0:14:39.11:0,39,511	0/0:29,0:29:87.25:0,87,1165	0/0:29,0:29:69.08:0,69,835	1/1:0,16:16:42.13:504,42,0	1/1:0,22:22:54.17:647,54,0	1/1:2,36:38:96.29:1151,96,0	0/0:34,0:33:87.26:0,87,1157	1/1:0,13:13:39.12:468,39,0	1/1:4,36:41:99:1249,110,0	1/1:1,18:19:54.16:647,54,0	0/0:31,0:31:87.28:0,87,1200	0/0:23,0:23:69.23:0,69,966	1/1:3,25:28:61.29:752,61,0	0/0:32,0:32:90.29:0,90,1242	0/0:26,0:26:75.23:0,75,1020	0/0:39,0:39:99:0,114,1521	0/0:20,0:20:60.18:0,60,819	0/0:18,0:18:48.16:0,48,671	0/0:37,0:37:99:0,111,1472	0/0:58,0:58:99:0,171,2288	0/0:22,0:22:60.20:0,60,840	0/0:25,0:25:72.20:0,72,957	0/0:37,0:36:99:0,108,1474	1/1:2,20:22:51.16:611,51,0	1/1:2,23:25:27.65:721,28,0	0/0:36,0:36:99:0,102,1411	1/1:0,22:22:63.15:738,63,0
chr10	54114074	.	AC	A	8287.20	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=9.741;DP=531;FS=1.049;HRun=2;HaplotypeScore=56.6710;InbreedingCoeff=0.9790;MQ=76.28;MQ0=0;MQRankSum=-1.189;QD=34.39;ReadPosRankSum=0.452;VQSLOD=4.8817;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,22:22:54.18:701,54,0	1/1:0,9:9:27.09:351,27,0	0/0:18,0:15:19.19:0,19,479	0/0:8,1:9:4.51:0,5,259	0/0:28,0:28:81.27:0,81,1209	0/0:22,0:22:60.20:0,60,897	0/0:22,0:22:66.21:0,66,969	1/1:1,36:37:99:1370,108,0	0/0:18,0:18:51.16:0,51,744	0/0:22,0:22:66.22:0,66,984	0/0:25,0:25:75.25:0,75,1116	0/0:11,0:11:30.10:0,30,449	0/0:12,0:12:36.12:0,36,540	0/0:17,0:17:51.17:0,51,764	1/1:1,22:23:54.18:701,54,0	1/1:0,27:27:69.22:896,69,0	1/1:0,25:25:66.21:857,66,0	1/1:0,18:18:54.18:701,54,0	1/1:2,15:16:42.12:531,42,0	1/1:0,25:25:69.22:896,69,0	1/1:0,11:11:30.10:389,30,0	0/0:15,0:15:45.15:0,45,674	0/0:18,0:18:51.17:0,51,764	0/0:12,0:12:36.12:0,36,536	0/0:14,0:14:42.14:0,42,628	0/0:18,0:18:54.18:0,54,808	1/1:0,27:27:69.22:894,69,0	0/0:9,0:9:24.08:0,24,359
chr10	54114530	.	CAT	C	2649.21	PASS	AB=1.000;AC=39;AF=0.696;AN=56;BaseQRankSum=5.446;DP=241;FS=6.782;HRun=0;HaplotypeScore=47.0057;InbreedingCoeff=0.4723;MQ=67.11;MQ0=4;MQRankSum=0.323;QD=13.66;ReadPosRankSum=1.823;VQSLOD=2.4654;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,7:9:3.01:38,3,0	1/1:3,0:3:2.84:14,3,0	0/0:7,0:3:0.47:0,0,1	0/0:16,0:6:0.47:0,0,1	1/1:7,0:7:5.81:32,6,0	1/1:7,0:7:17.52:102,18,0	1/1:2,0:1:2.90:16,3,0	1/1:40,0:40:94.60:767,95,0	1/1:5,0:5:11.65:66,12,0	1/1:4,0:4:8.39:39,8,0	1/1:8,0:8:14.50:80,15,0	0/0:5,0:5:11.99:0,12,146	0/0:8,0:8:18.06:0,18,299	0/1:7,0:7:15.15:24,0,15	1/1:12,0:12:14.20:70,14,0	1/1:5,0:5:5.68:28,6,0	1/1:4,13:17:28.90:345,29,0	1/1:4,12:16:33.05:397,33,0	1/1:10,7:16:38.87:392,39,0	1/1:3,5:8:12.04:151,12,0	1/1:1,2:3:6.02:76,6,0	0/0:4,0:4:9.02:0,9,125	0/0:5,0:5:12.04:0,12,197	0/0:2,0:2:3.01:0,3,50	0/1:5,0:5:7.11:7,0,65	1/1:6,0:6:10.77:55,11,0	1/1:1,2:3:6.02:76,6,0	0/1:10,0:8:13.22:38,0,13
chr10	54117389	.	TGCGG	T	133.89	PASS	AC=6;AF=0.120;AN=50;BaseQRankSum=3.757;DP=234;FS=13.034;HRun=0;HaplotypeScore=45.0632;InbreedingCoeff=0.4653;MQ=79.74;MQ0=2;MQRankSum=-3.976;QD=3.83;ReadPosRankSum=2.775;VQSLOD=-0.4346;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:14.81:0,15,97	./.	0/0:20,0:10:23.14:0,23,196	0/0:15,0:7:7.53:0,8,34	0/0:3,0:3:2.98:0,3,22	0/0:11,0:11:3.47:0,3,25	0/0:14,0:14:13.60:0,14,130	0/0:6,0:6:17.08:0,17,102	0/0:8,0:8:8.93:0,9,64	0/0:4,0:4:9.83:0,10,67	0/0:1,0:1:3:0,3,25	0/0:12,0:12:14.91:0,15,113	0/0:9,0:9:17.96:0,18,165	0/0:11,0:11:5.89:0,6,37	0/0:6,0:6:0.89:0,1,2	0/0:7,0:7:8.96:0,9,69	1/1:12,6:18:15.04:175,15,0	1/1:8,2:11:5.92:61,6,0	0/0:9,0:9:5.08:0,5,48	0/0:4,0:4:5.87:0,6,39	0/0:21,0:21:21.10:0,21,155	0/0:4,0:4:2.98:0,3,23	./.	0/0:10,0:10:2.99:0,3,24	1/1:6,0:6:1.25:3,1,0	./.	0/0:4,0:4:11.85:0,12,83	0/0:1,0:1:0.47:0,0,1
chr10	54117410	.	G	GCGT	3445.02	PASS	AC=30;AF=0.556;AN=54;BaseQRankSum=5.304;DP=256;FS=6.398;HRun=0;HaplotypeScore=90.3438;InbreedingCoeff=0.8443;MQ=74.79;MQ0=3;MQRankSum=-8.896;QD=24.61;ReadPosRankSum=0.520;VQSLOD=2.7010;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,2:10:17.80:166,18,0	./.	0/0:23,0:13:26.42:0,26,277	0/0:15,0:8:17.71:0,18,195	1/1:3,0:3:5:26,5,0	1/1:5,4:9:24.03:308,24,0	1/1:9,5:14:33.91:434,34,0	0/0:4,0:4:9:0,9,97	1/1:6,1:7:12.01:150,12,0	1/1:5,1:6:9.03:115,9,0	1/1:2,0:2:3.01:34,3,0	0/0:15,0:15:42.12:0,42,584	0/0:7,0:7:17.85:0,18,222	1/1:12,6:18:41.87:512,42,0	1/1:5,4:9:24.01:332,24,0	1/1:1,0:3:8.80:76,9,0	1/1:21,0:21:42.50:382,43,0	1/1:9,0:9:23.63:239,24,0	0/0:6,0:6:12.03:0,12,162	0/0:7,0:7:17.63:0,18,207	0/0:13,0:13:27.03:0,27,365	0/0:1,0:1:3.01:0,3,45	0/0:2,0:2:2.92:0,3,29	0/0:13,0:13:30.06:0,30,425	1/1:9,0:9:5.56:136,6,0	1/1:14,2:16:35.91:357,36,0	0/0:7,0:7:17.53:0,18,210	1/1:2,2:4:12.04:179,12,0
chr10	54117427	.	T	TTCTCTCC	12843.06	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=7.031;DP=249;FS=7.303;HRun=0;HaplotypeScore=67.2404;InbreedingCoeff=0.9059;MQ=99.85;MQ0=1;MQRankSum=-12.264;QD=112.66;ReadPosRankSum=3.143;VQSLOD=6.9639;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,4:5:12.04:490,12,0	1/1:0,3:4:9.03:370,9,0	0/0:19,0:17:21.66:0,22,1074	0/0:19,0:17:47.75:0,48,1038	1/1:0,2:2:6.02:142,6,0	1/1:0,8:8:24.08:969,24,0	1/1:0,10:10:30.10:1214,30,0	1/1:1,6:7:18.03:736,18,0	1/1:0,4:4:12.04:494,12,0	1/1:0,5:6:15.05:600,15,0	1/1:0,2:2:6.02:247,6,0	0/0:15,0:15:45.15:0,45,1256	0/0:11,0:11:30.10:0,30,797	1/1:1,12:13:36.10:1465,36,0	1/1:0,6:6:18.06:736,18,0	1/1:0,2:2:6.02:245,6,0	1/1:0,15:15:42.14:1717,42,0	1/1:0,6:8:18.06:739,18,0	0/0:11,0:11:33.10:0,33,800	0/0:10,0:10:30.10:0,30,798	0/0:19,0:19:57.18:0,57,1463	0/0:3,0:3:9.03:0,9,252	0/0:3,0:3:9.03:0,9,203	0/0:14,0:14:42.14:0,42,1171	1/1:0,6:6:18.06:709,18,0	1/1:0,13:13:39.13:1599,39,0	0/0:10,0:10:24.08:0,24,635	1/1:0,3:3:9.03:370,9,0
chr10	54118381	.	AT	A	1613.94	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=10.931;DP=775;FS=11.410;HRun=2;HaplotypeScore=76.8432;InbreedingCoeff=0.9998;MQ=59.63;MQ0=1;MQRankSum=-5.198;QD=25.62;ReadPosRankSum=-0.795;VQSLOD=2.0012;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,28:29:57.19:739,57,0	0/0:14,0:14:39.13:0,39,581	0/0:28,0:25:63.19:0,63,888	0/0:25,0:21:57.19:0,57,854	0/0:29,0:29:87.29:0,87,1295	0/0:31,0:31:90.30:0,90,1330	0/0:31,0:31:90.28:0,90,1305	0/0:35,0:32:96.33:0,96,1438	0/0:30,0:30:90.30:0,90,1348	0/0:28,0:28:84.28:0,84,1243	0/0:17,0:17:51.17:0,51,765	0/0:29,0:29:87.29:0,87,1285	0/0:29,0:29:87.29:0,87,1303	0/0:48,0:48:99:0,135,1963	0/0:38,0:38:99:0,114,1706	0/0:30,0:30:90.29:0,90,1328	1/1:0,20:20:51.17:661,51,0	1/1:0,12:12:29.31:357,29,0	0/0:25,0:24:69.23:0,69,1033	0/0:26,0:26:72.24:0,72,1058	0/0:32,0:32:93.31:0,93,1390	0/0:23,0:23:69.23:0,69,1030	0/0:29,0:29:87.27:0,87,1262	0/0:26,0:26:78.26:0,78,1168	0/0:19,0:19:57.18:0,57,836	0/0:44,1:45:93.56:0,94,1892	0/0:27,0:27:78.25:0,78,1148	0/0:18,0:18:54.18:0,54,809
chr10	54118769	.	G	GA	11315.56	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=-15.851;DP=622;FS=15.471;HRun=7;HaplotypeScore=54.5871;InbreedingCoeff=0.9828;MQ=68.69;MQ0=0;MQRankSum=-0.911;QD=30.92;ReadPosRankSum=-0.770;VQSLOD=3.2494;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,40:42:99:1341,111,0	1/1:0,5:5:15.05:181,15,0	0/0:16,0:15:35.97:0,36,334	0/0:12,0:10:6.04:0,6,132	0/0:25,0:25:57.08:0,57,550	1/1:2,17:19:48.15:580,48,0	1/1:2,11:13:33.10:399,33,0	1/1:4,22:26:66.18:771,66,0	0/0:24,0:24:72.10:0,72,690	1/1:1,24:25:72.22:867,72,0	1/1:0,23:23:66.20:797,66,0	0/0:38,0:38:99:0,108,1031	0/0:18,0:18:51.08:0,51,493	0/0:20,0:20:57.09:0,57,550	0/0:18,0:18:51.08:0,51,492	1/1:5,20:25:31.21:659,31,0	1/1:4,22:26:66.20:797,66,0	1/1:1,15:16:42.13:507,42,0	1/1:4,22:26:66.20:795,66,0	1/1:2,30:32:90.23:1071,90,0	1/1:4,6:10:24.06:278,24,0	0/0:22,0:22:57.06:0,57,542	0/0:23,0:23:57.08:0,57,550	0/0:14,0:14:39.04:0,39,370	0/0:26,0:26:75.12:0,75,724	1/1:2,28:30:84.25:1003,84,0	1/1:6,27:33:69.21:833,69,0	1/1:0,15:15:36.11:435,36,0
chr10	54119277	.	C	CAG	1651.30	PASS	AB=0.918;AC=42;AF=0.875;AN=48;BaseQRankSum=1.589;DP=660;FS=25.973;HRun=0;HaplotypeScore=108.6918;InbreedingCoeff=-0.1535;MQ=59.56;MQ0=13;MQRankSum=-0.517;QD=2.86;ReadPosRankSum=0.106;VQSLOD=0.5023;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:51,1:51:5.74:130,0,6	./.	./.	./.	1/1:31,0:31:2.92:17,3,0	1/1:21,0:21:3.47:26,3,0	1/1:34,0:34:8.73:62,9,0	1/1:23,0:21:14.88:107,15,0	1/1:21,0:21:9:89,9,0	1/1:19,0:18:12.26:75,12,0	./.	0/1:20,0:20:17.13:103,0,17	1/1:17,0:17:3.01:42,3,0	1/1:17,2:26:9:78,9,0	1/1:31,0:31:6.10:189,6,0	1/1:27,0:26:8.97:78,9,0	0/1:17,6:23:43.31:140,0,43	1/1:17,0:18:0.47:1,0,0	1/1:16,0:16:6.01:69,6,0	1/1:15,0:15:5.74:37,6,0	1/1:30,0:30:17.33:113,17,0	0/1:19,0:18:11.72:12,0,24	0/1:18,0:18:14.18:17,0,14	0/1:29,12:42:79.88:112,0,80	1/1:17,0:17:3:26,3,0	1/1:20,0:19:20.66:171,21,0	1/1:26,0:26:6.85:48,7,0	1/1:9,0:9:3.47:26,3,0
chr10	54122009	.	A	AT	6767.23	PASS	AB=1.000;AC=26;AF=0.520;AN=50;BaseQRankSum=-6.802;DP=413;FS=1.889;HRun=8;HaplotypeScore=50.7835;InbreedingCoeff=0.8467;MQ=71.71;MQ0=0;MQRankSum=-1.288;QD=24.34;ReadPosRankSum=1.242;VQSLOD=5.4769;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,23:26:44.75:769,45,0	./.	0/1:15,0:11:4.77:5,0,116	0/1:17,0:10:10.18:10,0,76	0/0:18,0:18:51:0,51,460	1/1:4,14:18:39.12:450,39,0	1/1:1,6:7:12.04:138,12,0	0/0:30,0:30:62.98:0,63,568	0/0:9,0:9:18:0,18,165	1/1:3,15:18:45.12:510,45,0	1/1:3,18:21:26.69:555,27,0	0/0:8,0:8:24.01:0,24,220	0/0:10,0:10:30.02:0,30,275	0/0:6,0:6:12:0,12,110	0/0:14,0:14:36.01:0,36,329	./.	1/1:2,31:33:78.23:897,78,0	1/1:2,24:26:66.20:762,66,0	1/1:3,18:21:26.69:561,27,0	1/1:4,20:24:57.17:657,57,0	./.	0/0:6,0:6:12:0,12,110	0/0:8,0:8:19.82:0,20,170	0/0:7,0:7:15.01:0,15,137	0/0:19,0:19:54.02:0,54,494	1/1:2,14:16:42.12:485,42,0	1/1:4,23:27:63.16:727,63,0	1/1:1,8:9:21.06:242,21,0
chr10	54122058	.	CT	C	324.75	PASS	AC=2;AF=0.038;AN=52;BaseQRankSum=1.531;DP=463;FS=1.790;HRun=11;HaplotypeScore=81.6819;InbreedingCoeff=0.6348;MQ=77.29;MQ0=0;MQRankSum=-1.931;QD=12.03;ReadPosRankSum=-0.238;VQSLOD=3.5120;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,21:27:50.88:419,51,0	./.	0/0:15,0:14:7.83:0,8,58	0/0:18,0:13:4.87:0,5,103	0/0:23,3:26:19.87:0,20,614	0/0:16,1:17:23.47:0,23,446	0/0:10,0:10:24.06:0,24,256	0/0:30,0:31:69.04:0,69,718	0/0:17,0:17:48.10:0,48,500	0/0:17,0:17:33.08:0,33,352	0/0:26,0:27:72.11:0,72,741	0/0:10,0:11:32.94:0,33,329	0/0:7,0:7:14.99:0,15,145	0/0:4,0:4:12.03:0,12,128	0/0:14,0:14:39.09:0,39,410	./.	0/0:37,0:37:96.14:0,96,990	0/0:24,1:26:48.91:0,49,688	0/0:21,1:22:29.48:0,29,511	0/0:29,1:30:50.56:0,51,743	0/0:0,0:1:2.84:0,3,14	0/0:7,0:7:21.05:0,21,224	0/0:14,0:14:30.04:0,30,307	0/0:8,0:8:15.04:0,15,160	0/0:24,0:24:63.03:0,63,654	0/0:19,0:19:48.12:0,48,512	0/0:30,0:30:75.19:0,75,799	0/0:4,0:4:6.02:0,6,64
chr10	54123614	.	TCAAAAATGTCAGAG	T	29614.23	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=17.769;DP=600;FS=1.052;HRun=0;HaplotypeScore=260.5167;InbreedingCoeff=0.9835;MQ=79.92;MQ0=0;MQRankSum=-16.194;QD=81.58;ReadPosRankSum=4.037;VQSLOD=4.0711;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,32:34:57.19:2235,57,0	0/0:10,0:10:30.09:0,30,1776	0/0:24,0:24:66.22:0,66,3014	0/0:16,0:16:37.50:0,37,1521	1/1:0,21:21:39.01:1219,39,0	1/1:1,21:22:39.13:1679,39,0	1/1:1,19:20:42.14:1808,42,0	1/1:1,28:29:83.98:2205,84,0	1/1:0,25:25:54.19:2325,54,0	1/1:0,17:17:48.16:1899,48,0	1/1:0,15:15:24.08:1033,24,0	0/0:21,0:21:63.19:0,63,3473	0/0:32,0:32:96.33:0,96,6429	1/1:1,19:20:42.14:1796,42,0	1/1:0,30:30:69.24:2923,69,0	0/0:14,0:14:42.14:0,42,2572	0/0:19,0:19:54.19:0,54,3714	0/0:18,0:18:51.17:0,51,3362	1/1:0,19:19:57.12:2056,57,0	1/1:0,23:23:36.06:1439,36,0	1/1:1,15:16:18.04:674,18,0	0/0:27,0:27:81.24:0,81,4916	0/0:23,0:23:69.20:0,69,4131	0/0:33,0:33:99:0,99,6770	1/1:0,24:24:45.15:1902,45,0	1/1:0,22:22:59.99:1877,60,0	1/1:3,20:23:54.19:2284,54,0	1/1:0,3:3:6.02:258,6,0
chr10	54123959	.	CA	C	12906.84	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=10.522;DP=592;FS=1.194;HRun=6;HaplotypeScore=89.0487;InbreedingCoeff=0.9953;MQ=79.45;MQ0=0;MQRankSum=-5.860;QD=28.37;ReadPosRankSum=0.547;VQSLOD=5.1735;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,23:25:66.16:709,66,0	1/1:0,8:8:24.06:258,24,0	0/0:20,0:20:56.11:0,56,633	0/0:13,0:13:16.63:0,17,279	1/1:3,29:32:75.18:806,75,0	1/1:0,18:18:51.13:548,51,0	1/1:2,18:20:54.11:571,54,0	1/1:2,32:34:96.23:1023,96,0	1/1:3,29:32:84.21:903,84,0	1/1:4,26:30:81.16:857,81,0	1/1:3,13:16:33.08:354,33,0	0/0:29,0:29:81.26:0,81,1066	0/0:20,0:20:60.20:0,60,789	1/1:2,20:22:54.14:580,54,0	1/1:4,30:34:87.22:935,87,0	1/1:1,19:20:50.66:548,51,0	1/1:0,22:22:63.16:677,63,0	1/1:0,22:22:63.16:677,63,0	1/1:2,11:13:33.08:355,33,0	1/1:5,23:28:69.15:733,69,0	1/1:2,8:10:21.05:225,21,0	0/0:19,0:19:54.16:0,54,695	0/0:17,0:17:45.14:0,45,586	0/0:19,0:19:54.18:0,54,710	1/1:0,21:21:63.16:677,63,0	1/1:3,19:22:60.14:638,60,0	1/1:0,20:20:60.15:640,60,0	1/1:0,6:6:18.05:193,18,0
chr10	54123985	.	T	TG	4974.35	PASS	AB=0.611;AC=19;AF=0.339;AN=56;BaseQRankSum=-3.121;DP=601;FS=1.178;HRun=7;HaplotypeScore=114.1428;InbreedingCoeff=0.9337;MQ=83.68;MQ0=0;MQRankSum=-8.225;QD=25.64;ReadPosRankSum=-0.193;VQSLOD=3.9563;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:45.05:0,45,434	0/0:8,0:8:21.03:0,21,202	0/0:20,0:20:51.01:0,51,483	0/0:21,0:21:45.02:0,45,424	0/0:24,0:24:51.08:0,51,491	1/1:4,16:20:54.16:640,54,0	1/1:6,16:22:45:484,45,0	0/0:37,0:37:95.76:0,96,874	0/0:30,0:30:84.13:0,84,810	1/1:8,25:33:82.49:975,82,0	1/1:1,12:13:33.10:398,33,0	0/0:31,0:31:78.11:0,78,753	0/0:18,0:18:48.07:0,48,463	0/0:17,0:17:48.08:0,48,462	0/0:28,0:28:69.10:0,69,661	0/0:19,0:19:45.07:0,45,434	0/0:24,0:24:57.04:0,57,541	0/0:25,0:25:57.08:0,57,550	0/1:4,7:11:4.91:229,0,5	1/1:6,17:23:27.04:310,27,0	1/1:2,11:13:12.51:146,13,0	0/0:21,0:21:45.03:0,45,426	0/0:13,0:13:27.03:0,27,260	0/0:23,0:23:66.11:0,66,637	0/0:24,0:24:63.10:0,63,607	1/1:5,22:27:66.20:795,66,0	1/1:2,23:26:66.17:781,66,0	1/1:0,6:6:18.06:217,18,0
chr10	54125166	.	TGATAGATA	T	872.92	PASS	AB=1.000;AC=8;AF=0.167;AN=48;BaseQRankSum=-0.813;DP=666;FS=0.000;HRun=0;HaplotypeScore=182.6637;InbreedingCoeff=0.5564;MQ=72.02;MQ0=18;MQRankSum=0.150;QD=6.82;ReadPosRankSum=1.247;VQSLOD=2.5293;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:23:11.75:308,0,12	0/0:15,0:15:12.04:0,12,200	./.	./.	0/0:33,0:31:33.11:0,33,561	0/0:26,0:26:17.97:0,18,293	0/0:15,0:13:18.06:0,18,302	1/1:45,0:42:0.47:2,0,0	0/0:27,0:27:30.01:0,30,487	0/0:29,0:29:42.13:0,42,751	0/0:22,0:22:39.12:0,39,611	1/1:16,0:16:15.02:197,15,0	0/1:24,0:23:22.07:82,0,22	0/0:25,0:25:30.09:0,30,472	0/0:31,0:30:39.13:0,39,700	0/0:26,0:26:42.13:0,42,667	0/0:17,0:17:4.41:0,4,28	0/0:18,0:18:27.06:0,27,414	0/0:10,0:9:6.02:0,6,109	0/0:33,0:32:43.93:0,44,643	0/0:18,0:17:39.12:0,39,647	./.	./.	1/1:19,0:16:27.07:415,27,0	0/0:30,0:29:45.15:0,45,802	0/0:36,0:35:51.16:0,51,865	0/0:31,0:30:39.13:0,39,653	0/0:15,0:15:24.05:0,24,332
chr10	54125219	.	GATACATAC	G	2223.05	PASS	AB=0.946;AC=19;AF=0.365;AN=52;BaseQRankSum=-1.879;DP=678;FS=2.917;HRun=0;HaplotypeScore=205.6641;InbreedingCoeff=0.2431;MQ=51.89;MQ0=45;MQRankSum=3.467;QD=6.24;ReadPosRankSum=-1.566;VQSLOD=2.3648;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:21:22.32:337,22,0	1/1:12,0:12:4.30:53,4,0	./.	./.	0/1:15,24:37:17.54:28,0,18	0/0:16,0:15:2.87:0,3,23	0/0:21,0:13:3.20:0,3,27	0/0:45,0:40:35.50:0,35,331	1/1:34,0:31:28.91:477,29,0	0/1:33,0:30:61.97:62,0,129	1/1:26,0:25:1.54:4,2,0	0/0:20,0:20:38.80:0,39,587	0/0:27,0:25:36.12:0,36,601	1/1:24,0:23:27.09:449,27,0	0/1:25,0:24:18.80:364,0,19	1/1:31,0:30:0.37:1,0,0	0/0:25,0:24:33.10:0,33,518	0/0:20,0:18:27.05:0,27,491	0/0:15,0:11:3.01:0,3,42	0/1:29,0:28:50.32:50,0,67	0/0:22,0:19:8.88:0,9,119	0/0:18,0:17:30.10:0,30,492	0/0:27,0:26:30.10:0,30,469	0/0:25,0:21:18.06:0,18,280	0/1:30,0:29:9.80:536,0,10	0/0:41,0:32:6.28:0,6,100	0/1:33,0:31:9.89:10,0,17	0/1:15,0:15:14.52:15,0,37
chr10	54125390	.	G	GGT	1826.77	PASS	AB=0.861;AC=40;AF=0.769;AN=52;BaseQRankSum=3.793;DP=708;FS=7.125;HRun=0;HaplotypeScore=134.9763;InbreedingCoeff=0.2051;MQ=59.26;MQ0=5;MQRankSum=-0.543;QD=3.18;ReadPosRankSum=-3.958;VQSLOD=0.9454;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:42,11:53:19.46:113,0,19	0/1:8,2:10:44.95:77,0,45	./.	./.	1/1:8,0:17:0.67:22,1,0	1/1:16,0:27:3:26,3,0	1/1:28,0:28:10.36:74,10,0	1/1:41,0:41:4.62:20,5,0	1/1:13,1:21:8.98:82,9,0	1/1:26,0:32:25.40:166,25,0	1/1:8,0:14:4.55:13,5,0	0/0:25,0:25:32.59:0,33,358	0/0:19,0:20:23.90:0,24,242	1/1:25,0:25:25.09:212,25,0	1/1:21,2:37:5.04:32,5,0	0/1:10,12:25:47.07:287,0,47	0/1:12,0:12:16.67:41,0,17	1/1:19,0:19:16.73:113,17,0	1/1:22,0:21:12.01:122,12,0	1/1:18,1:25:7.56:43,8,0	1/1:26,0:25:13.78:152,14,0	0/1:18,3:21:26.60:27,0,143	0/1:12,0:12:9.93:10,0,99	0/0:24,0:26:29.18:0,29,288	1/1:20,0:38:5.51:33,6,0	1/1:28,0:26:19.96:149,20,0	1/1:21,0:21:5.55:51,6,0	1/1:14,0:16:16.02:122,16,0
chr10	54125660	.	A	AC	20250.44	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-16.859;DP=722;FS=0.933;HRun=1;HaplotypeScore=63.2129;InbreedingCoeff=0.9997;MQ=93.05;MQ0=0;MQRankSum=-7.277;QD=41.50;ReadPosRankSum=2.468;VQSLOD=5.3571;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,49:50:99:1978,132,0	1/1:0,8:8:24.08:360,24,0	0/0:36,0:35:99:0,99,1235	0/0:27,0:27:78.24:0,78,992	1/1:1,32:33:90.26:1305,90,0	1/1:0,17:17:42.14:629,42,0	1/1:3,27:30:75.25:1124,75,0	1/1:1,25:25:75.23:1084,75,0	1/1:0,28:28:81.27:1214,81,0	1/1:0,25:25:75.25:1123,75,0	1/1:1,17:18:51.17:763,51,0	0/0:31,0:31:93.30:0,93,1204	0/0:27,0:27:81.25:0,81,1038	1/1:1,27:28:81.27:1214,81,0	1/1:0,30:30:87.29:1304,87,0	1/1:1,32:33:90.29:1349,90,0	0/0:21,0:21:57.18:0,57,740	0/0:18,0:18:54.18:0,54,701	1/1:1,24:24:75.23:1098,75,0	1/1:0,19:19:57.15:829,57,0	1/1:1,33:34:90.26:1323,90,0	0/0:25,0:25:75.24:0,75,973	0/0:23,0:23:66.20:0,66,843	0/0:26,0:26:69.22:0,69,895	1/1:0,14:14:42.14:630,42,0	1/1:2,27:29:81.27:1214,81,0	1/1:1,25:26:69.23:1034,69,0	1/1:0,15:15:45.15:674,45,0
chr10	54130621	.	T	TTC	5717.99	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=16.532;DP=576;FS=3.370;HRun=0;HaplotypeScore=121.4131;InbreedingCoeff=0.9943;MQ=80.08;MQ0=0;MQRankSum=-2.667;QD=16.15;ReadPosRankSum=1.819;VQSLOD=4.7931;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:78.15:0,78,1022	1/1:0,8:8:20.99:330,21,0	0/0:13,0:13:36.09:0,36,461	0/0:17,0:17:36.41:0,36,395	1/1:29,0:29:73.01:399,73,0	1/1:20,0:20:48.96:258,49,0	1/1:22,0:22:51.75:269,52,0	0/0:22,0:22:45.13:0,45,590	1/1:16,0:16:43.13:223,43,0	1/1:22,0:22:57.95:341,58,0	1/1:18,0:18:51.80:270,52,0	0/0:15,0:15:33.10:0,33,439	0/0:21,0:21:63.20:0,63,850	1/1:19,0:19:38.80:197,39,0	1/1:22,0:22:51.83:273,52,0	1/1:3,23:26:60.21:1044,60,0	0/0:25,0:25:66.22:0,66,906	0/0:20,0:20:54.18:0,54,740	1/1:17,0:17:43.63:307,44,0	1/1:33,0:33:71.91:377,72,0	1/1:16,0:16:40.25:209,40,0	0/0:20,0:20:60.17:0,60,767	0/0:24,0:24:69.18:0,69,872	0/0:13,0:13:36.10:0,36,464	1/1:29,0:29:77.63:403,78,0	1/1:27,0:27:75.24:445,75,0	1/1:25,0:25:60.38:313,60,0	1/1:5,0:5:11.50:60,12,0
chr10	54130626	.	T	TC	12497.38	PASS	AB=1.000;AC=33;AF=0.589;AN=56;BaseQRankSum=10.727;DP=563;FS=2.733;HRun=1;HaplotypeScore=84.8363;InbreedingCoeff=0.9212;MQ=80.40;MQ0=0;MQRankSum=-2.571;QD=35.61;ReadPosRankSum=3.010;VQSLOD=5.2696;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:78.22:0,78,1056	1/1:9,0:9:20.33:113,20,0	0/0:15,0:15:42.11:0,42,538	0/0:15,0:15:38.23:0,38,420	1/1:1,27:29:78.18:1099,78,0	1/1:0,18:18:51.17:746,51,0	1/1:0,21:21:54.18:790,54,0	0/0:18,0:18:54.15:0,54,700	1/1:0,15:15:45.15:658,45,0	1/1:0,21:21:63.09:798,63,0	1/1:0,20:20:54.09:762,54,0	0/0:13,0:13:39.11:0,39,505	0/0:21,0:21:63.20:0,63,864	1/1:1,15:17:45.14:630,45,0	1/1:0,21:21:54.18:790,54,0	0/1:27,0:27:70.16:259,0,70	0/0:23,0:23:69.23:0,69,956	0/0:20,0:20:60.20:0,60,823	1/1:0,21:20:60.14:740,60,0	1/1:1,27:28:75.11:1042,75,0	1/1:0,16:16:42.14:615,42,0	0/0:21,0:21:63.18:0,63,811	0/0:24,0:24:72.20:0,72,934	0/0:14,0:14:42.12:0,42,540	1/1:0,29:29:81.27:1185,81,0	1/1:0,29:28:84.26:1175,84,0	1/1:0,25:25:63.21:921,63,0	1/1:0,5:5:12.04:175,12,0
chr10	54131679	.	A	AT	7433.54	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-14.513;DP=565;FS=18.989;HRun=4;HaplotypeScore=49.6980;InbreedingCoeff=0.9966;MQ=70.37;MQ0=0;MQRankSum=0.304;QD=36.09;ReadPosRankSum=0.051;VQSLOD=2.7592;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,126,1420	0/0:8,0:8:24.07:0,24,272	0/0:8,0:8:21.06:0,21,233	0/0:8,0:8:18.04:0,18,195	0/0:29,0:29:84.22:0,84,942	1/1:3,24:27:69.22:929,69,0	1/1:0,10:10:24.08:328,24,0	0/0:41,0:41:96.25:0,96,1073	0/0:16,0:16:48.11:0,48,525	1/1:2,31:33:93.27:1223,93,0	1/1:2,25:27:69.14:920,69,0	0/0:20,0:20:60.14:0,60,662	0/0:25,0:25:66.18:0,66,741	0/0:13,0:13:36.10:0,36,408	0/0:13,0:13:33.08:0,33,366	0/0:24,0:24:63.16:0,63,698	0/0:18,0:18:51.13:0,51,569	0/0:25,0:25:63.15:0,63,702	1/1:2,18:20:54.15:719,54,0	1/1:0,24:24:66.22:900,66,0	1/1:0,8:8:24.08:328,24,0	0/0:15,0:15:45.11:0,45,494	0/0:23,0:23:63.18:0,63,715	0/0:11,0:11:24.07:0,24,272	0/0:18,0:18:48.14:0,48,544	1/1:2,18:20:54.18:736,54,0	1/1:2,26:28:75.25:1023,75,0	1/1:1,8:9:24.08:328,24,0
chr10	54132385	.	G	GTT	3877.10	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=6.187;DP=524;FS=7.180;HRun=2;HaplotypeScore=96.1511;InbreedingCoeff=0.9950;MQ=71.56;MQ0=8;MQRankSum=-1.593;QD=34.31;ReadPosRankSum=-1.334;VQSLOD=2.9439;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:38:84.16:0,84,1089	1/1:9,0:9:17.92:231,18,0	0/0:25,0:20:54.03:0,54,740	0/0:25,0:19:51.05:0,51,657	1/1:18,1:19:21.06:280,21,0	0/0:16,0:15:39.12:0,39,538	0/0:25,0:25:62.18:0,62,861	0/0:20,0:20:56.77:0,57,813	1/1:20,0:20:57.16:863,57,0	0/0:24,0:24:72.05:0,72,942	0/0:15,0:15:30.10:0,30,423	0/0:13,0:13:39.13:0,39,556	0/0:13,0:13:39.12:0,39,516	1/1:15,1:16:42.01:571,42,0	1/1:22,1:23:69.17:941,69,0	1/1:14,3:17:48.08:663,48,0	0/0:24,0:24:60.14:0,60,783	0/0:22,0:22:60.16:0,60,829	0/0:11,0:11:24.08:0,24,334	0/0:23,0:23:54.18:0,54,766	0/0:19,0:19:38.14:0,38,513	0/0:20,0:20:35.71:0,36,508	0/0:11,0:10:24.08:0,24,347	0/0:28,0:27:66.20:0,66,891	1/1:8,1:9:24.08:328,24,0	0/0:19,0:19:48.15:0,48,649	0/0:10,0:10:21.06:0,21,282	0/0:9,0:8:21.07:0,21,277
chr10	54132387	.	TAC	T	1210.03	PASS	AB=0.893;AC=24;AF=0.462;AN=52;BaseQRankSum=8.266;DP=531;FS=6.860;HRun=0;HaplotypeScore=105.6025;InbreedingCoeff=0.0812;MQ=68.28;MQ0=9;MQRankSum=1.317;QD=3.95;ReadPosRankSum=1.150;VQSLOD=2.0031;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:36,0:37:9.89:50,0,10	1/1:7,0:8:2.84:14,3,0	./.	./.	0/0:19,0:19:1.77:0,2,4	0/1:14,1:15:19.69:20,0,250	0/1:20,4:26:33.61:34,0,240	0/0:24,0:24:9.50:0,9,105	1/1:15,4:19:18.02:183,18,0	0/0:23,0:24:0.79:0,1,118	0/0:13,0:13:7.94:0,8,149	0/0:16,0:15:9.03:0,9,133	0/1:15,1:16:29.88:45,0,30	1/1:10,2:15:14.62:124,15,0	1/1:10,10:23:41.61:397,42,0	1/1:12,0:17:19.02:87,19,0	0/1:20,3:23:67.60:68,0,254	0/0:24,0:24:21.52:0,22,289	1/1:9,1:10:3.01:32,3,0	0/0:24,0:24:12.01:0,12,137	0/1:21,1:22:42.40:42,0,193	0/0:21,0:21:17.92:0,18,177	0/0:13,0:12:15.05:0,15,207	0/1:23,6:29:72.72:73,0,288	1/1:6,3:9:11.96:121,12,0	0/1:14,2:16:43.81:44,0,176	0/1:8,1:9:23.44:23,0,54	0/1:8,1:8:23.43:23,0,79
chr10	54132635	.	T	TAC	1082.84	PASS	AB=0.900;AC=28;AF=0.538;AN=52;BaseQRankSum=1.441;DP=514;FS=3.754;HRun=0;HaplotypeScore=106.1090;InbreedingCoeff=0.3418;MQ=63.35;MQ0=9;MQRankSum=-1.293;QD=3.71;ReadPosRankSum=-0.484;VQSLOD=2.5007;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:13.44:0,13,181	1/1:6,0:6:0.94:2,1,0	./.	./.	1/1:15,0:15:5.87:39,6,0	0/0:10,0:10:12:0,12,115	0/0:19,0:19:17.94:0,18,178	1/1:21,0:20:5.88:57,6,0	1/1:19,0:21:0.47:1,0,0	0/0:15,0:19:6.34:0,6,79	0/1:9,0:12:13.39:13,0,30	0/0:15,0:14:8.81:0,9,79	0/1:8,1:9:16.96:17,0,18	1/1:10,0:10:2.69:8,3,0	1/1:17,0:17:6:65,6,0	1/1:16,0:19:8.32:41,8,0	1/1:19,1:23:23.92:206,24,0	1/1:12,0:13:9.43:127,9,0	1/1:15,1:16:6.02:89,6,0	0/1:17,2:18:17.89:162,0,18	0/1:23,6:28:60.28:75,0,60	0/1:15,1:16:26.95:34,0,27	0/0:10,0:10:14.50:0,15,124	0/0:29,0:29:8.94:0,9,249	1/1:26,0:28:10.38:60,10,0	0/0:19,0:19:23.90:0,24,224	0/1:11,3:14:7.15:257,0,7	0/0:8,0:9:8.50:0,8,117
chr10	54132681	.	CAGAG	C	1694.13	PASS	AB=0.869;AC=27;AF=0.519;AN=52;BaseQRankSum=5.032;DP=538;FS=12.136;HRun=0;HaplotypeScore=133.4645;InbreedingCoeff=0.5355;MQ=44.50;MQ0=27;MQRankSum=-2.928;QD=5.63;ReadPosRankSum=-0.478;VQSLOD=1.6446;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:20,10:28:20.94:325,21,0	0/0:7,0:8:3.49:0,3,8	./.	./.	1/1:15,0:21:2.79:26,3,0	1/1:10,4:15:9.03:139,9,0	1/1:6,1:11:9.02:111,9,0	0/0:26,0:23:8.99:0,9,122	0/1:12,0:16:5.73:124,0,6	1/1:17,2:16:9.01:121,9,0	1/1:10,4:13:9.03:139,9,0	0/0:15,0:14:24.02:0,24,423	0/0:9,0:14:23:0,23,235	1/1:6,0:13:15.36:113,15,0	1/1:8,0:18:15.33:128,15,0	0/1:11,0:14:1.04:1,0,51	0/1:15,1:18:26.45:65,0,26	1/1:18,7:25:13.42:211,13,0	0/0:19,0:16:21.07:0,21,383	0/0:18,0:18:9.01:0,9,110	0/0:20,0:19:15.04:0,15,257	0/0:15,1:16:17.63:0,18,306	0/1:17,0:14:2.05:2,0,180	0/0:26,0:25:36.12:0,36,749	1/1:22,0:25:5.54:51,6,0	0/1:16,2:16:39.94:156,0,40	0/0:10,0:18:3.01:0,3,39	1/1:17,1:19:12.04:165,12,0
chr10	54133988	.	T	TAC	1404.58	PASS	AB=0.825;AC=33;AF=0.635;AN=52;BaseQRankSum=2.711;DP=570;FS=2.789;HRun=0;HaplotypeScore=98.0262;InbreedingCoeff=0.3367;MQ=69.54;MQ0=12;MQRankSum=-0.745;QD=3.72;ReadPosRankSum=-1.552;VQSLOD=2.4167;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:31:2.50:0,2,9	0/0:9,0:9:5.99:0,6,54	./.	./.	1/1:11,0:11:3.01:36,3,0	1/1:25,0:25:20.06:185,20,0	1/1:18,0:21:4.72:32,5,0	1/1:27,0:27:0.88:2,1,0	0/1:11,8:20:26.44:77,0,26	1/1:23,0:22:12.41:100,12,0	1/1:15,0:15:6.02:82,6,0	0/0:13,0:14:3.26:0,3,51	0/0:9,0:10:14.85:0,15,131	0/1:14,0:14:12.98:13,0,26	1/1:20,1:20:2.92:43,3,0	0/0:18,0:20:17.17:0,17,173	0/1:19,7:28:44.54:158,0,45	0/1:13,7:20:66.97:67,0,119	1/1:11,0:11:2.99:24,3,0	1/1:20,0:20:12.02:135,12,0	1/1:26,0:24:5.98:61,6,0	0/0:21,0:21:11.99:0,12,111	0/0:21,0:21:8.94:0,9,66	0/1:28,1:29:10.96:11,0,259	1/1:12,2:14:14.85:146,15,0	1/1:18,0:18:13.74:107,14,0	1/1:25,0:25:21.40:185,21,0	1/1:3,4:8:9.03:109,9,0
chr10	54135337	.	TA	T	4052.10	PASS	AB=0.818;AC=23;AF=0.411;AN=56;BaseQRankSum=11.010;DP=625;FS=2.310;HRun=12;HaplotypeScore=74.4009;InbreedingCoeff=0.8522;MQ=66.85;MQ0=0;MQRankSum=-0.671;QD=14.17;ReadPosRankSum=2.180;VQSLOD=4.4073;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,0:56:85.53:247,86,0	0/0:13,0:13:33.05:0,33,328	0/0:10,0:8:5.86:0,6,39	0/0:9,0:9:9.37:0,9,127	0/0:33,0:34:81.15:0,81,815	1/1:5,17:22:47.80:371,48,0	1/1:4,16:20:29.97:310,30,0	0/0:3,0:28:71.76:0,72,371	0/0:12,0:12:6.82:0,7,246	1/1:6,24:30:68.53:521,69,0	1/1:5,24:29:68.64:527,69,0	0/0:28,0:28:60.09:0,60,593	0/0:20,2:22:1.56:0,2,345	0/0:15,2:17:21.84:0,22,391	0/0:20,2:22:4.62:0,5,405	0/0:26,0:26:66.10:0,66,652	0/0:29,1:30:54.90:0,55,730	0/0:26,0:26:66.08:0,66,658	1/1:1,15:16:44.81:345,45,0	1/1:2,21:24:49.61:364,50,0	1/1:3,12:15:29.88:232,30,0	0/0:21,1:22:36.83:0,37,530	0/0:21,0:21:54.04:0,54,524	0/1:7,2:9:8.21:8,0,107	0/0:19,0:19:54.07:0,54,533	1/1:1,21:22:62.69:477,63,0	1/1:5,17:22:41.82:325,42,0	1/1:3,18:21:41.48:325,41,0
chr10	54137195	.	TCACACA	T	4620.71	PASS	AB=0.707;AC=10;AF=0.179;AN=56;BaseQRankSum=9.144;DP=1132;FS=129.575;HRun=0;HaplotypeScore=468.2020;InbreedingCoeff=0.6324;MQ=45.21;MQ0=9;MQRankSum=-11.566;QD=20.54;ReadPosRankSum=2.420;VQSLOD=1.7704;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:26:24.44:0,24,282	0/1:5,8:16:1.11:371,0,1	0/0:52,0:30:36.01:0,36,894	0/0:53,0:42:78.26:0,78,2203	0/1:39,8:49:2.87:193,0,3	0/0:26,0:26:57.48:0,57,1641	0/0:44,0:45:75.60:0,76,2357	0/0:33,0:40:63.17:0,63,1299	1/1:14,27:43:32.41:1324,32,0	0/0:75,0:86:99:0,128,3647	0/0:41,0:43:53.73:0,54,1490	0/0:35,0:39:78.21:0,78,2339	0/0:39,0:43:76.53:0,77,2649	1/1:6,16:24:29.19:827,29,0	1/1:13,15:27:18.38:834,18,0	0/1:10,12:24:14.13:570,0,14	0/0:26,0:26:72.09:0,72,2169	0/0:18,0:19:42.35:0,42,1191	0/0:24,0:25:54.17:0,54,1661	0/0:48,0:54:35.07:0,35,1964	0/0:62,0:63:99:0,118,3723	0/0:51,0:55:60.23:0,60,2631	0/0:41,0:43:40.76:0,41,1385	0/0:38,0:38:90.27:0,90,2942	0/1:27,8:40:28.95:503,0,29	0/0:60,0:64:99:0,139,3783	0/0:33,0:35:59.18:0,59,1923	0/0:26,0:27:46.52:0,47,1448
chr10	54138166	.	G	GT	6287.76	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-10.078;DP=618;FS=1.082;HRun=9;HaplotypeScore=67.4141;InbreedingCoeff=0.9698;MQ=76.98;MQ0=2;MQRankSum=-0.357;QD=24.85;ReadPosRankSum=0.841;VQSLOD=5.6136;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,114,982	1/1:2,10:12:4.02:269,4,0	0/0:31,0:25:8.45:0,8,297	0/0:30,0:26:24.72:0,25,256	1/1:2,14:17:35.93:372,36,0	1/1:2,19:21:48.13:531,48,0	1/1:1,15:17:32.92:346,33,0	0/0:30,0:29:34.66:0,35,515	1/1:1,15:16:39.11:431,39,0	1/1:7,21:29:45.90:683,46,0	1/1:0,18:19:50.31:525,50,0	0/0:24,0:24:62.98:0,63,547	0/0:15,0:15:41.93:0,42,356	1/1:4,12:16:30.08:332,30,0	1/1:3,21:24:51.14:564,51,0	1/1:1,21:22:57.15:623,57,0	0/0:31,0:31:80.97:0,81,703	0/0:20,0:20:56.98:0,57,495	0/0:25,0:25:59.86:0,60,502	0/0:17,0:17:44.99:0,45,391	0/0:18,0:18:35.57:0,36,297	0/0:8,0:8:24:0,24,208	0/0:16,0:16:44.99:0,45,390	0/0:21,0:21:50.94:0,51,431	1/1:0,19:19:45.12:498,45,0	1/1:4,25:29:72.15:782,72,0	0/0:29,0:29:77.94:0,78,669	1/1:0,12:12:30.08:331,30,0
chr10	54138324	.	CT	C	1538.71	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=4.885;DP=592;FS=5.538;HRun=7;HaplotypeScore=101.5960;InbreedingCoeff=0.4673;MQ=68.67;MQ0=6;MQRankSum=4.993;QD=5.81;ReadPosRankSum=0.364;VQSLOD=0.2803;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,30:32:81.18:826,81,0	1/1:5,0:5:7.57:42,8,0	0/0:24,0:19:36:0,36,381	0/0:24,0:16:38.83:0,39,388	1/1:20,0:20:10.15:196,10,0	0/0:34,0:34:28:0,28,132	0/1:33,0:32:6.85:7,0,40	0/1:38,0:37:10.60:24,0,11	1/1:12,0:12:23.17:127,23,0	0/0:21,0:31:6.56:0,7,208	0/1:19,0:19:13.19:37,0,13	0/0:15,0:15:42.13:0,42,528	0/0:18,0:18:45.13:0,45,553	1/1:17,0:17:12.58:154,13,0	0/0:2,0:22:21.94:0,22,109	1/1:12,0:11:25.80:134,26,0	0/0:31,0:31:78.39:0,78,955	0/0:23,0:23:59.86:0,60,727	0/1:14,0:14:3.68:44,0,4	0/1:21,0:21:14.54:15,0,30	0/0:10,0:9:2.98:0,3,22	0/0:19,0:19:54.16:0,54,663	0/0:24,0:24:60.19:0,60,754	0/0:19,0:19:57.18:0,57,717	0/1:17,0:17:2.76:113,0,3	0/1:25,0:25:7.75:8,0,60	0/0:16,0:16:13.47:0,13,63	0/0:17,0:17:10.75:0,11,44
chr10	54138327	.	T	TTTG	5748.73	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=0.295;DP=628;FS=12.963;HRun=0;HaplotypeScore=125.2350;InbreedingCoeff=0.9560;MQ=65.84;MQ0=6;MQRankSum=-4.737;QD=21.69;ReadPosRankSum=1.531;VQSLOD=3.8360;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:80.45:0,80,596	0/0:5,0:5:12.03:0,12,141	0/0:25,0:20:48.05:0,48,578	0/0:24,0:15:40.27:0,40,456	0/0:20,0:20:50.49:0,50,528	1/1:1,32:33:36.12:791,36,0	1/1:3,31:35:23.44:403,23,0	0/0:36,0:35:7.21:0,7,251	0/0:11,0:11:24.05:0,24,278	1/1:23,9:32:90.15:1349,90,0	1/1:0,1:31:26.74:430,27,0	0/0:14,0:14:42.14:0,42,698	0/0:17,0:17:48.14:0,48,744	0/0:16,0:16:38.85:0,39,421	1/1:20,0:20:22.16:115,22,0	0/0:12,0:11:26.88:0,27,246	0/0:29,0:30:83.94:0,84,1302	0/0:22,0:22:60.20:0,60,983	1/1:5,0:21:57.85:742,58,0	1/1:1,20:23:27.03:422,27,0	0/0:3,0:17:4.44:0,4,14	0/0:20,0:20:54.17:0,54,863	0/0:23,0:23:63.20:0,63,1013	0/0:21,0:21:60.16:0,60,967	0/0:17,0:17:42.61:0,43,426	1/1:1,2:35:67.68:969,68,0	1/1:3,0:18:18.01:264,18,0	1/1:0,16:16:12.04:264,12,0
chr10	54138329	.	TTTG	T	1114.18	PASS	AB=1.000;AC=6;AF=0.107;AN=56;BaseQRankSum=-0.633;DP=607;FS=1.153;HRun=0;HaplotypeScore=124.7205;InbreedingCoeff=0.2967;MQ=64.21;MQ0=6;MQRankSum=3.632;QD=10.92;ReadPosRankSum=-5.770;VQSLOD=2.0682;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:85.35:0,85,598	0/1:5,0:5:5.49:6,0,5	0/0:23,0:18:44.52:0,45,499	0/0:26,0:17:15.62:0,16,435	0/1:19,0:19:25.40:25,0,34	0/0:34,0:34:42.08:0,42,466	0/0:34,0:33:18.15:0,18,188	1/1:4,30:33:85.05:1176,85,0	0/0:13,0:13:12.51:0,13,34	0/0:31,0:31:62.46:0,62,780	0/1:25,0:25:0.99:1,0,131	0/0:14,0:14:42.14:0,42,832	0/0:18,0:18:51.10:0,51,838	0/0:16,0:16:18.87:0,19,53	0/0:20,0:20:24.07:0,24,307	0/0:13,0:12:11.58:0,12,29	0/0:29,0:29:67.58:0,68,1510	0/0:22,0:22:63.14:0,63,1093	0/1:19,0:19:24.08:24,0,212	0/0:22,0:22:24.19:0,24,217	0/0:17,0:16:3.01:0,3,36	0/0:19,0:19:54.14:0,54,972	0/0:23,0:23:63.16:0,63,1073	0/0:24,0:24:69.10:0,69,1223	0/0:16,0:16:6.55:0,7,50	0/0:29,0:29:30.86:0,31,412	0/0:12,0:12:20.97:0,21,247	0/0:17,0:17:15.01:0,15,151
chr10	54138331	.	TG	T	3004.99	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=1.444;DP=600;FS=0.799;HRun=1;HaplotypeScore=101.7987;InbreedingCoeff=0.8636;MQ=61.50;MQ0=6;MQRankSum=3.542;QD=20.44;ReadPosRankSum=-0.528;VQSLOD=3.5609;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:34,0:34:5.46:107,0,5	1/1:0,4:4:11.77:138,12,0	0/0:22,0:16:36.96:0,37,368	0/0:25,1:16:5.43:0,5,296	1/1:4,16:20:51.74:696,52,0	0/0:33,0:33:40.64:0,41,304	0/0:33,0:32:15.84:0,16,137	1/1:31,0:30:81.84:470,82,0	1/1:0,13:13:24.08:333,24,0	0/0:31,0:31:70.46:0,70,624	0/0:25,0:25:12.54:0,13,125	0/0:14,0:14:42.14:0,42,569	0/0:18,0:18:54.10:0,54,674	1/1:0,15:15:36.12:495,36,0	0/0:20,0:20:7.35:0,7,45	1/1:0,13:12:27.09:376,27,0	0/0:31,0:31:84.64:0,85,1115	0/0:21,0:21:62.76:0,63,781	0/0:17,0:17:45.89:0,46,277	0/0:22,0:22:19.80:0,20,148	0/0:17,0:16:6.01:0,6,61	0/0:18,0:18:54.07:0,54,678	0/0:23,0:23:63.14:0,63,791	0/0:25,0:25:72.07:0,72,868	1/1:7,10:17:46.55:587,47,0	0/0:29,0:29:51.65:0,52,313	0/0:13,0:13:23.38:0,23,175	0/0:15,0:15:14.89:0,15,109
chr10	54138482	.	TTTTTC	T	1175.74	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.478;DP=521;FS=4.172;HRun=0;HaplotypeScore=104.4758;InbreedingCoeff=0.9772;MQ=75.81;MQ0=0;MQRankSum=-3.013;QD=45.22;ReadPosRankSum=-2.109;VQSLOD=3.2032;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,99,2793	0/0:7,0:7:21.07:0,21,644	0/0:10,0:10:30.08:0,30,680	0/0:26,0:23:48:0,48,1133	0/0:15,0:15:42.14:0,42,1214	0/0:22,0:22:63.22:0,63,1898	0/0:19,0:18:51.18:0,51,1516	1/1:5,21:26:63.22:1271,63,0	0/0:9,0:9:27.09:0,27,797	0/0:21,0:21:63.21:0,63,1804	0/0:15,0:15:39.13:0,39,1156	0/0:20,0:20:57.20:0,57,1676	0/0:13,0:13:36.12:0,36,1004	0/0:19,0:19:54.19:0,54,1540	0/0:17,0:16:51.18:0,51,1553	0/0:12,0:11:33.11:0,33,980	0/0:25,0:25:72.25:0,72,2141	0/0:22,0:22:63.21:0,63,1801	0/0:19,0:19:48.16:0,48,1342	0/0:14,0:14:39.13:0,39,1148	0/0:25,0:25:63.22:0,63,1850	0/0:11,0:11:27.09:0,27,796	0/0:7,0:7:15.05:0,15,460	0/0:29,0:29:84.29:0,84,2375	0/0:17,0:17:48.16:0,48,1371	0/0:22,0:22:63.22:0,63,1829	0/0:32,0:32:96.33:0,96,2777	0/0:13,0:13:30.10:0,30,919
chr10	54139170	.	T	TCCCACA	1930.18	PASS	AB=0.718;AC=32;AF=0.941;AN=34;BaseQRankSum=-3.020;DP=51;FS=13.824;HRun=0;HaplotypeScore=13.9519;InbreedingCoeff=-0.1982;MQ=134.66;MQ0=0;MQRankSum=-2.164;QD=41.07;ReadPosRankSum=-1.213;VQSLOD=0.9907;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,0:2:6:61,6,0	./.	0/1:3,2:5:8.45:226,0,8	0/1:7,0:10:65.23:262,0,65	1/1:2,0:2:3.01:76,3,0	./.	1/1:0,0:1:3.01:80,3,0	1/1:4,0:4:12.03:235,12,0	1/1:2,0:2:3.01:38,3,0	./.	1/1:1,0:1:3.01:58,3,0	1/1:1,0:1:3.01:52,3,0	1/1:1,0:1:3.01:51,3,0	1/1:4,0:4:6.01:77,6,0	./.	1/1:0,0:2:6.02:96,6,0	./.	./.	1/1:1,0:1:3.01:53,3,0	1/1:2,0:3:9.03:211,9,0	./.	./.	./.	1/1:1,0:1:3.01:73,3,0	1/1:2,0:2:6.02:188,6,0	1/1:4,0:4:9.02:182,9,0	./.	./.
chr10	54140655	.	T	TAGA	1540.24	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-0.682;DP=617;FS=4.808;HRun=0;HaplotypeScore=112.6992;InbreedingCoeff=0.9009;MQ=65.48;MQ0=1;MQRankSum=-3.191;QD=42.78;ReadPosRankSum=-0.557;VQSLOD=4.7985;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,30:36:78.22:1635,78,0	0/0:2,0:2:6.02:0,6,96	0/0:29,0:27:56.87:0,57,898	0/0:34,0:32:45.54:0,46,899	0/0:18,0:18:45.14:0,45,699	0/0:21,0:20:57.12:0,57,840	0/0:17,0:17:42.13:0,42,650	0/0:33,0:33:96.33:0,96,1543	0/0:10,0:10:27.09:0,27,434	0/0:16,0:16:42.14:0,42,675	0/0:19,0:19:45.14:0,45,698	0/0:31,0:31:93.32:0,93,1495	0/0:20,0:20:42.13:0,42,651	0/0:31,0:31:60.19:0,60,941	0/0:18,0:18:48.16:0,48,771	0/0:17,0:17:48.15:0,48,748	0/0:37,0:37:99:0,102,1612	0/0:33,0:33:90.24:0,90,1392	0/0:17,0:17:42.14:0,42,667	0/0:15,0:15:39.12:0,39,602	0/0:31,0:30:78.27:0,78,1248	0/0:24,0:25:52.33:0,52,1084	0/0:19,0:19:54.18:0,54,868	0/0:27,0:27:75.26:0,75,1205	0/0:18,0:18:45.13:0,45,698	0/0:15,0:15:39.13:0,39,627	0/0:20,0:20:57.19:0,57,916	0/0:7,0:7:21.07:0,21,338
chr10	54140673	.	ATG	A	955.88	PASS	AB=1.000;AC=12;AF=0.214;AN=56;BaseQRankSum=0.185;DP=569;FS=9.288;HRun=0;HaplotypeScore=97.1076;InbreedingCoeff=0.1770;MQ=65.91;MQ0=1;MQRankSum=-0.148;QD=5.17;ReadPosRankSum=-4.673;VQSLOD=-0.4951;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:26:25.27:0,25,236	0/0:6,0:6:14.87:0,15,108	0/0:29,0:25:32.13:0,32,621	0/0:36,0:34:90.08:0,90,1301	0/0:18,0:18:20.99:0,21,221	0/1:16,0:15:20.17:39,0,20	0/1:15,0:15:11.49:49,0,11	1/1:9,21:30:60.08:647,60,0	0/0:8,0:8:15.03:0,15,168	0/1:15,0:15:16.28:64,0,16	0/1:14,0:14:30.80:68,0,31	0/0:27,0:27:66.16:0,66,1023	0/0:20,0:20:51.16:0,51,823	0/0:28,0:28:56.94:0,57,503	0/0:14,0:14:12.03:0,12,131	0/0:17,0:17:18.11:0,18,282	0/0:33,0:33:90.22:0,90,1422	0/0:25,0:25:36.23:0,36,824	0/1:18,0:18:28.79:56,0,29	0/1:15,0:15:12.93:13,0,21	1/1:30,0:30:14.81:123,15,0	0/0:24,0:24:57.09:0,57,768	0/0:19,0:19:50.97:0,51,755	0/0:27,0:27:75.19:0,75,1159	0/0:21,0:21:9.17:0,9,203	0/1:14,0:14:15.18:44,0,15	0/1:18,0:18:5.29:13,0,5	0/0:6,0:6:4.35:0,4,25
chr10	54140682	.	T	TG	1697.09	PASS	AB=0.788;AC=17;AF=0.304;AN=56;BaseQRankSum=5.624;DP=557;FS=7.486;HRun=1;HaplotypeScore=93.7099;InbreedingCoeff=0.3950;MQ=70.43;MQ0=4;MQRankSum=-2.287;QD=8.32;ReadPosRankSum=-0.554;VQSLOD=0.3604;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:24:99:102,0,139	0/0:8,0:8:23.14:0,23,124	0/0:30,1:28:62.08:0,62,868	0/0:39,0:36:98.59:0,99,1155	0/0:16,0:16:20.77:0,21,210	0/1:9,7:15:0.57:126,0,1	1/1:5,12:16:2.68:162,3,0	0/1:25,0:25:3.50:3,0,189	0/0:10,0:10:13.96:0,14,98	1/1:6,4:10:1.57:152,2,0	0/1:8,4:12:29.99:61,0,30	0/0:22,0:22:66.21:0,66,855	0/0:20,0:20:57.19:0,57,738	0/0:30,0:30:53.13:0,53,286	0/0:13,0:13:11.78:0,12,82	0/0:24,0:23:47.97:0,48,253	0/0:33,0:33:93.30:0,93,1203	0/0:21,0:21:54.14:0,54,681	0/1:12,2:14:22.44:22,0,33	0/1:5,11:16:11.35:171,0,11	1/1:17,14:29:26.21:372,26,0	0/0:21,0:21:57.17:0,57,721	0/0:17,0:17:51.16:0,51,652	0/0:30,0:30:81.26:0,81,1048	0/0:16,1:16:6.04:0,6,135	1/1:4,8:12:2.61:149,3,0	1/1:1,19:20:34.95:420,35,0	0/1:2,4:6:0.89:124,0,1
chr10	54140684	.	T	TGTGG	2908.96	PASS	AB=0.903;AC=21;AF=0.375;AN=56;BaseQRankSum=7.359;DP=566;FS=5.383;HRun=0;HaplotypeScore=123.2126;InbreedingCoeff=0.0032;MQ=69.68;MQ0=4;MQRankSum=-3.073;QD=9.70;ReadPosRankSum=-2.736;VQSLOD=2.3804;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:21:44.47:451,44,0	0/1:8,0:8:78.88:79,0,80	0/0:30,0:26:63.09:0,63,952	0/0:38,0:36:65.57:0,66,1503	0/1:7,0:13:44.44:44,0,71	0/1:18,0:17:28.99:71,0,29	0/1:18,0:17:8.05:8,0,69	0/0:24,0:24:57.02:0,57,570	0/1:3,0:19:8.27:175,0,8	0/1:13,0:13:31.43:49,0,31	0/0:12,0:12:17.69:0,18,169	0/0:23,0:23:66.19:0,66,1197	0/0:20,0:20:57.16:0,57,1015	1/1:3,27:31:48.16:1260,48,0	1/1:2,0:14:11.96:165,12,0	0/1:24,0:23:99:149,0,288	0/0:32,0:32:93.27:0,93,1708	0/0:21,0:21:42.14:0,42,993	0/1:14,0:15:34.01:109,0,34	0/1:16,0:16:32.98:99,0,33	0/1:31,0:29:41.60:170,0,42	0/0:19,0:19:45.11:0,45,747	0/0:17,0:18:51.14:0,51,888	0/0:28,0:28:83.98:0,84,1363	0/1:5,0:17:34.21:97,0,34	0/1:12,0:12:48.11:50,0,48	1/1:22,0:21:4.17:63,4,0	0/1:6,0:6:11.46:51,0,11
chr10	54140882	.	TAA	T	576.59	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=8.230;DP=634;FS=0.761;HRun=2;HaplotypeScore=88.5402;InbreedingCoeff=0.9949;MQ=70.12;MQ0=0;MQRankSum=-7.323;QD=20.59;ReadPosRankSum=1.159;VQSLOD=1.6120;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,20:28:71.98:671,72,0	0/0:9,0:9:27.09:0,27,522	0/0:14,0:14:42.12:0,42,662	0/0:12,0:12:21.57:0,22,428	0/0:28,0:28:84.29:0,84,1608	0/0:17,0:17:51.17:0,51,969	0/0:11,0:11:33.10:0,33,603	0/0:28,0:28:84.27:0,84,1539	0/0:19,0:19:57.20:0,57,1087	0/0:40,0:40:99:0,117,2188	0/0:26,0:26:75.22:0,75,1359	0/0:28,0:28:84.25:0,84,1523	0/0:24,0:24:69.21:0,69,1298	0/0:23,0:23:69.19:0,69,1287	0/0:21,0:21:63.20:0,63,1165	0/0:23,0:23:69.24:0,69,1318	0/0:27,0:27:81.23:0,81,1518	0/0:21,0:21:63.16:0,63,1125	0/0:11,0:11:33.11:0,33,638	0/0:27,0:27:81.25:0,81,1445	0/0:26,0:26:78.26:0,78,1450	0/0:27,0:27:81.26:0,81,1521	0/0:21,0:21:63.22:0,63,1200	0/0:23,0:23:66.23:0,66,1274	0/0:23,0:23:69.19:0,69,1264	0/0:23,0:23:69.23:0,69,1302	0/0:37,0:37:99:0,111,2119	0/0:17,0:17:51.17:0,51,985
chr10	54140886	.	AAGCGTTATCATAATCATGG	A	2818.65	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.759;DP=627;FS=0.000;HRun=0;HaplotypeScore=308.0319;InbreedingCoeff=0.9988;MQ=71.22;MQ0=0;MQRankSum=-7.334;QD=128.12;ReadPosRankSum=1.690;VQSLOD=2.5279;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,20:22:63.22:2914,63,0	0/0:10,0:10:30.09:0,30,2276	0/0:12,0:12:36.12:0,36,2386	0/0:12,0:12:32.70:0,33,1478	0/0:29,0:29:87.30:0,87,6740	0/0:18,0:18:54.19:0,54,4448	0/0:11,0:11:33.10:0,33,2240	0/0:32,0:32:96.32:0,96,6859	0/0:20,0:20:60.21:0,60,4468	0/0:39,0:39:99:0,114,8890	0/0:22,0:22:66.20:0,66,5077	0/0:26,0:26:78.27:0,78,6085	0/0:22,0:22:66.23:0,66,5603	0/0:22,0:22:66.22:0,66,5273	0/0:23,0:23:66.23:0,66,5257	0/0:24,0:24:72.25:0,72,6037	0/0:26,0:26:78.26:0,78,6335	0/0:21,0:21:63.22:0,63,4985	0/0:14,0:14:42.14:0,42,2520	0/0:26,0:26:75.23:0,75,6126	0/0:23,0:23:69.23:0,69,5264	0/0:27,0:27:81.28:0,81,6129	0/0:23,0:23:69.24:0,69,5745	0/0:21,0:21:63.13:0,63,4660	0/0:22,0:22:66.22:0,66,5234	0/0:24,0:24:72.21:0,72,5667	0/0:39,0:39:99:0,117,8821	0/0:17,0:17:51.14:0,51,3927
chr10	54141103	.	G	GTT	8857.99	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-5.345;DP=635;FS=0.664;HRun=8;HaplotypeScore=76.4907;InbreedingCoeff=0.9991;MQ=80.56;MQ0=0;MQRankSum=-2.578;QD=37.38;ReadPosRankSum=1.767;VQSLOD=4.7180;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,102,1136	0/0:8,0:8:24.06:0,24,268	0/0:19,0:20:36.86:0,37,414	0/0:20,0:20:44.26:0,44,451	0/0:29,0:29:81.20:0,81,890	1/1:5,22:27:63.21:982,63,0	1/1:4,17:22:47.65:722,48,0	0/0:24,0:24:66.16:0,66,729	0/0:23,0:23:66.18:0,66,736	1/1:4,28:32:81.26:1260,81,0	1/1:2,19:21:57.15:860,57,0	0/0:18,0:18:51.11:0,51,559	0/0:17,0:17:47.62:0,48,511	0/0:16,0:16:39.07:0,39,425	0/0:38,0:38:99:0,108,1204	0/0:22,0:21:60.16:0,60,669	0/0:26,0:26:72.18:0,72,802	0/0:16,0:16:45.12:0,45,502	1/1:6,17:23:51.17:802,51,0	1/1:4,23:27:69.20:1060,69,0	1/1:1,9:10:21.07:333,21,0	0/0:19,0:19:57.15:0,57,635	0/0:25,0:25:69.16:0,69,759	0/0:15,0:15:45.12:0,45,502	0/0:23,0:23:66.12:0,66,713	1/1:4,17:22:54.14:798,54,0	1/1:4,28:34:86.13:1279,86,0	1/1:2,17:19:48.16:762,48,0
chr10	54142747	.	GCATGCCAAGTC	G	48.24	PASS	AC=4;AF=0.080;AN=50;BaseQRankSum=3.346;DP=721;FS=13.825;HRun=0;HaplotypeScore=228.3936;InbreedingCoeff=0.6397;MQ=75.95;MQ0=3;MQRankSum=-3.346;QD=1.24;ReadPosRankSum=-0.281;VQSLOD=1.5921;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:0.47:0,0,1	1/1:3,2:5:5.87:35,6,0	./.	./.	0/0:25,0:25:21.01:0,21,761	0/0:29,0:29:18.05:0,18,708	0/0:26,0:26:13.26:0,13,154	./.	0/0:25,0:25:9.03:0,9,475	0/0:26,0:26:21.03:0,21,834	0/0:17,0:17:6.02:0,6,258	0/0:30,0:30:24.07:0,24,1038	0/0:36,0:36:27.08:0,27,1176	0/0:37,0:37:36.06:0,36,1281	0/0:29,0:28:21.07:0,21,910	1/1:29,5:34:5.79:111,6,0	0/0:31,0:31:30.09:0,30,1415	0/0:16,0:16:18.04:0,18,703	0/0:27,0:26:5.98:0,6,48	0/0:22,0:21:15.05:0,15,552	0/0:54,0:54:39.12:0,39,1600	0/0:27,0:27:12.04:0,12,456	0/0:18,0:18:18.04:0,18,503	0/0:28,0:28:24.08:0,24,1155	0/0:19,0:19:15.05:0,15,602	0/0:27,0:27:12.03:0,12,445	0/0:26,0:26:15.02:0,15,507	0/0:6,0:6:6.02:0,6,318
chr10	54144797	.	T	TA	6692.63	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-11.114;DP=550;FS=0.344;HRun=4;HaplotypeScore=53.4171;InbreedingCoeff=0.9977;MQ=85.98;MQ0=0;MQRankSum=-2.133;QD=36.57;ReadPosRankSum=0.459;VQSLOD=4.9398;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,117,1302	0/0:7,0:7:18.04:0,18,196	0/0:19,0:19:45.07:0,45,471	0/0:19,0:19:47.16:0,47,516	0/0:32,0:32:81.21:0,81,908	1/1:1,24:25:66.22:902,66,0	1/1:1,24:25:66.22:903,66,0	0/0:22,0:22:63.17:0,63,707	0/0:30,0:30:90.24:0,90,1011	1/1:0,21:21:63.19:842,63,0	1/1:1,14:15:42.10:551,42,0	0/0:15,0:15:45.13:0,45,510	0/0:13,0:13:39.10:0,39,433	0/0:15,0:15:42.12:0,42,476	0/0:17,0:17:48.14:0,48,544	0/0:22,0:22:63.16:0,63,698	0/0:26,0:26:78.22:0,78,885	0/0:12,0:12:36.08:0,36,397	1/1:2,20:22:60.19:805,60,0	1/1:0,19:19:57.14:757,57,0	1/1:3,7:10:21.07:287,21,0	0/0:23,0:23:60.13:0,60,658	0/0:10,0:10:27.06:0,27,294	0/0:22,0:22:60.17:0,60,680	0/0:19,0:19:54.15:0,54,612	1/1:1,19:20:57.14:742,57,0	1/1:3,15:18:42.14:575,42,0	1/1:0,8:8:24.08:328,24,0
chr10	54145817	.	TACAC	T	541.78	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=2.192;DP=667;FS=3.553;HRun=0;HaplotypeScore=142.8218;InbreedingCoeff=0.3521;MQ=52.96;MQ0=14;MQRankSum=1.701;QD=6.86;ReadPosRankSum=1.248;VQSLOD=2.4993;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:31,19:52:44.16:635,44,0	0/0:12,0:12:5.98:0,6,89	0/0:27,0:16:6.02:0,6,97	0/0:36,0:23:5.75:0,6,56	0/0:26,0:26:17.83:0,18,283	0/0:23,0:20:9.02:0,9,121	0/0:26,0:26:11.65:0,12,171	0/0:23,0:23:38.39:0,38,512	0/0:33,0:32:9.03:0,9,177	0/0:23,0:22:43.02:0,43,571	0/0:13,0:13:6.02:0,6,94	0/0:19,0:19:38.87:0,39,777	0/0:21,0:22:29.84:0,30,557	0/1:27,0:27:3.20:3,0,128	0/0:22,0:22:9:0,9,139	0/0:27,0:26:3:0,3,48	0/0:30,0:28:18.05:0,18,284	0/0:19,0:19:15.04:0,15,263	0/0:14,0:12:20.55:0,21,288	0/0:20,0:18:9.03:0,9,144	0/0:25,0:24:12:0,12,174	0/0:22,0:24:23.82:0,24,448	0/0:7,0:8:14.79:0,15,270	0/0:29,1:36:29.30:0,29,1354	0/0:31,0:29:2.79:0,3,43	0/0:15,0:13:27.08:0,27,401	0/0:25,0:23:24.04:0,24,325	0/0:6,0:6:13.57:0,14,181
chr10	54148093	.	AC	A	8627.37	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=5.880;DP=712;FS=3.391;HRun=8;HaplotypeScore=77.4254;InbreedingCoeff=0.9997;MQ=77.43;MQ0=1;MQRankSum=-1.070;QD=23.64;ReadPosRankSum=0.521;VQSLOD=5.5492;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,42:47:99:1057,111,0	0/0:12,0:12:33.10:0,33,399	0/0:19,0:16:26.90:0,27,275	0/0:33,0:30:51.07:0,51,517	0/0:29,0:29:78.23:0,78,927	1/1:3,17:21:47.11:440,47,0	1/1:4,23:27:63.10:608,63,0	1/1:6,24:30:68.98:641,69,0	0/0:23,0:23:63.18:0,63,750	1/1:4,29:33:93.14:894,93,0	1/1:1,18:19:53.99:502,54,0	0/0:33,0:33:90.28:0,90,1086	0/0:31,0:31:81.23:0,81,955	0/0:20,0:20:57.15:0,57,664	0/0:38,0:38:99:0,102,1194	0/0:20,0:20:57.17:0,57,688	1/1:4,20:24:51.08:492,51,0	1/1:4,10:14:30.05:290,30,0	1/1:0,22:22:66.09:629,66,0	1/1:1,21:23:65.03:592,65,0	1/1:5,26:31:72.11:695,72,0	0/0:20,0:20:51.16:0,51,616	0/0:19,0:19:54.14:0,54,638	0/0:30,0:29:90.28:0,90,1086	0/0:20,0:20:54.13:0,54,616	1/1:6,29:35:93.07:880,93,0	1/1:7,20:27:60.09:579,60,0	1/1:1,11:12:35.73:329,36,0
chr10	54148869	.	AGACGCGCGCGCGCGCGCGCGCGCGCG	A	2200.94	PASS	AB=0.960;AC=16;AF=0.286;AN=56;BaseQRankSum=2.169;DP=572;FS=17.346;HRun=0;HaplotypeScore=373.1908;InbreedingCoeff=0.3803;MQ=47.70;MQ0=1;MQRankSum=-4.555;QD=9.37;ReadPosRankSum=-2.306;VQSLOD=0.8027;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:63.58:0,64,3784	1/1:7,0:8:1.85:293,2,0	0/0:17,0:12:36.10:0,36,696	0/0:17,0:13:13.01:0,13,350	1/1:12,3:15:5.84:121,6,0	0/0:20,0:20:20.08:0,20,478	0/0:25,0:24:16.76:0,17,372	0/1:22,0:22:99:230,0,637	0/1:18,2:20:41.79:354,0,42	0/1:25,0:25:24.87:25,0,1654	0/0:20,0:20:8.18:0,8,199	0/0:11,0:11:30.06:0,30,1678	0/0:10,0:10:29.98:0,30,1153	1/1:14,8:23:5.85:186,6,0	0/1:24,2:29:1.41:232,0,1	1/1:19,3:22:9.59:493,10,0	0/0:23,0:23:18.78:0,19,1737	0/1:22,0:22:8.98:9,0,1691	0/0:17,0:17:44.56:0,45,955	0/1:23,0:23:82.24:82,0,408	0/0:36,0:36:38.86:0,39,979	0/0:21,0:21:60.19:0,60,4032	0/0:19,0:19:51.12:0,51,3506	0/0:23,0:23:66.18:0,66,4291	1/1:20,4:26:4.23:341,4,0	0/0:19,0:19:39.07:0,39,1452	0/0:18,0:18:39.03:0,39,750	0/0:8,0:6:13.29:0,13,376
chr10	54148871	.	ACGCGCGCGCG	A	3666.43	PASS	AB=0.817;AC=32;AF=0.593;AN=54;BaseQRankSum=4.458;DP=550;FS=3.069;HRun=0;HaplotypeScore=235.5900;InbreedingCoeff=0.5033;MQ=45.39;MQ0=2;MQRankSum=-6.858;QD=9.99;ReadPosRankSum=-0.433;VQSLOD=2.4287;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:33:41.17:0,41,1344	1/1:8,0:8:1.90:79,2,0	./.	0/0:13,0:9:1.82:0,2,5	0/1:15,0:15:0:0,0,0	0/1:12,1:20:4.80:176,0,5	1/1:17,6:24:6.93:68,7,0	1/1:17,0:21:12.04:319,12,0	1/1:19,1:20:7.80:55,8,0	1/1:20,2:22:30.06:637,30,0	1/1:8,6:18:0.47:1,0,0	0/0:11,0:11:11.29:0,11,316	0/0:10,0:10:11.40:0,11,299	1/1:23,0:23:2.19:82,2,0	1/1:29,0:29:0.42:78,0,0	1/1:21,0:21:7.89:248,8,0	0/0:22,0:22:27.03:0,27,654	0/0:22,0:22:24.08:0,24,703	0/1:16,2:18:45.81:303,0,46	1/1:16,5:22:6.46:50,6,0	1/1:30,4:34:0.47:1,0,0	0/0:21,0:21:36.09:0,36,1069	0/0:15,0:15:30.09:0,30,1126	0/0:21,0:21:33.11:0,33,1224	1/1:25,0:25:0.20:27,0,0	1/1:12,4:19:29.50:578,29,0	0/1:8,5:17:39.52:679,0,40	1/1:2,2:6:15.03:285,15,0
chr10	54148879	.	GCGCGCGC	G	1171.43	PASS	AB=0.973;AC=15;AF=0.278;AN=54;BaseQRankSum=7.155;DP=439;FS=29.257;HRun=0;HaplotypeScore=196.1779;InbreedingCoeff=0.0539;MQ=40.61;MQ0=4;MQRankSum=-6.389;QD=6.81;ReadPosRankSum=4.313;VQSLOD=1.3041;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:50.19:0,50,1347	1/1:5,0:5:2.31:36,2,0	./.	0/0:6,0:3:3.01:0,3,38	0/1:7,1:9:0:0,0,0	0/1:20,0:20:66.14:66,0,156	0/0:25,0:23:2.45:0,2,81	0/1:12,0:12:99:156,0,156	0/0:11,1:12:13.59:0,14,99	0/1:18,0:17:99:210,0,259	0/0:19,0:18:5.57:0,6,61	0/0:11,0:11:24.07:0,24,472	0/0:6,0:6:15.05:0,15,392	0/1:14,1:15:34.80:39,0,35	1/1:13,0:18:2.24:43,2,0	1/1:14,1:16:8.56:142,9,0	0/0:19,0:19:33.06:0,33,726	0/0:22,0:22:33.11:0,33,784	0/1:12,0:12:83.02:83,0,263	0/0:22,0:22:12.09:0,12,149	0/0:31,0:31:24.05:0,24,304	0/0:17,0:17:45.15:0,45,1333	0/0:11,0:11:30.10:0,30,998	0/0:16,0:16:48.16:0,48,1325	0/0:18,0:20:8.86:0,9,59	0/1:19,0:19:99:169,0,310	0/1:16,0:16:97.55:290,0,98	0/1:11,0:7:18.58:86,0,19
chr10	54148893	.	G	GCACA	1396.63	PASS	AB=0.969;AC=31;AF=0.574;AN=54;BaseQRankSum=4.297;DP=437;FS=21.718;HRun=0;HaplotypeScore=179.9586;InbreedingCoeff=0.3048;MQ=40.75;MQ0=6;MQRankSum=-2.023;QD=4.21;ReadPosRankSum=-1.715;VQSLOD=1.0014;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:24,6:32:36.66:37,0,299	1/1:5,0:5:4.26:51,4,0	./.	0/0:3,0:1:2.04:0,2,6	1/1:11,0:11:6:62,6,0	1/1:16,0:16:14.40:103,14,0	1/1:24,0:22:13.91:167,14,0	0/0:12,0:12:0.73:0,1,50	1/1:11,0:11:9.86:94,10,0	0/1:17,0:15:4.99:167,0,5	1/1:19,0:18:3.01:50,3,0	0/0:8,0:8:10.56:0,11,133	0/0:6,0:6:11.71:0,12,142	1/1:16,0:16:3.48:67,3,0	1/1:23,0:23:11.53:111,12,0	1/1:16,0:16:0.73:3,1,0	0/0:21,0:21:12.96:0,13,289	0/1:23,0:23:44.74:45,0,225	0/1:11,0:11:40.65:97,0,41	1/1:20,0:19:6.02:92,6,0	0/1:19,0:18:13.21:18,0,13	0/0:22,0:22:53.86:0,54,636	0/0:17,0:17:39.03:0,39,528	0/0:14,0:14:13.16:0,13,488	1/1:21,0:21:8.57:93,9,0	1/1:20,0:20:11.13:269,11,0	0/1:16,0:15:15.25:42,0,15	0/1:11,0:7:0.08:0,0,16
chr10	54148895	.	G	GCACACA	3981.43	PASS	AB=1.000;AC=42;AF=0.808;AN=52;BaseQRankSum=3.771;DP=512;FS=7.861;HRun=0;HaplotypeScore=215.3001;InbreedingCoeff=0.4923;MQ=39.35;MQ0=6;MQRankSum=-4.773;QD=8.99;ReadPosRankSum=-0.160;VQSLOD=1.8052;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:34,0:33:18.05:291,18,0	1/1:6,0:6:5.92:130,6,0	./.	./.	1/1:14,0:13:5.88:110,6,0	1/1:15,0:15:11.14:144,11,0	1/1:25,0:23:14.86:275,15,0	1/1:14,0:14:7.58:105,8,0	1/1:19,0:19:22.78:319,23,0	1/1:15,0:13:20.37:314,20,0	1/1:22,0:21:2.94:75,3,0	0/1:9,0:9:37.97:38,0,53	0/0:6,0:6:6.02:0,6,118	1/1:24,0:24:11.48:127,11,0	1/1:28,0:28:11.15:195,11,0	1/1:19,0:19:2.85:95,3,0	1/1:16,0:28:9.87:154,10,0	1/1:10,15:27:11.69:247,12,0	1/1:16,0:15:18.97:271,19,0	1/1:23,0:22:6.49:143,6,0	1/1:24,0:23:5.80:73,6,0	0/0:22,0:21:6.16:0,6,444	0/0:18,0:18:36:0,36,498	0/0:15,0:15:21.03:0,21,337	1/1:29,0:29:7.32:149,7,0	1/1:22,0:22:45.50:580,45,0	1/1:18,0:17:1.99:137,2,0	0/1:12,0:8:4.72:9,0,5
chr10	54150735	.	CAAATGGATTT	C	9620.47	PASS	AB=0.889;AC=11;AF=0.196;AN=56;BaseQRankSum=15.675;DP=625;FS=6.356;HRun=0;HaplotypeScore=185.7877;InbreedingCoeff=0.8876;MQ=59.29;MQ0=1;MQRankSum=-15.807;QD=72.33;ReadPosRankSum=-3.801;VQSLOD=3.5968;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:75.24:0,75,3856	0/0:14,0:14:42.14:0,42,2006	0/1:7,0:6:16.25:16,0,464	0/0:7,0:6:18.06:0,18,725	1/1:0,24:24:63.08:1703,63,0	0/0:22,0:22:66.19:0,66,3336	0/0:24,0:24:72.25:0,72,3715	0/0:27,0:27:81.27:0,81,3765	1/1:0,12:12:33.11:1068,33,0	0/0:29,0:29:81.27:0,81,4042	0/0:17,0:17:51.18:0,51,2638	0/0:26,0:26:78.27:0,78,4145	0/0:28,0:28:84.29:0,84,4501	1/1:0,28:28:69.15:2059,69,0	1/1:0,25:25:63.22:2068,63,0	0/0:20,0:20:60.21:0,60,3210	0/0:20,0:20:60.21:0,60,2966	0/0:24,0:24:72.25:0,72,3599	0/0:26,0:26:78.27:0,78,3917	0/0:38,0:38:99:0,111,5842	0/0:14,0:14:42.14:0,42,2007	0/0:18,0:18:51.18:0,51,2705	0/0:24,0:24:72.23:0,72,3560	0/0:17,0:17:51.18:0,51,2689	1/1:0,36:36:90.26:2706,90,0	0/0:31,0:31:93.32:0,93,5101	0/0:26,0:26:78.27:0,78,4144	0/0:15,0:15:45.15:0,45,2336
chr10	54151829	.	C	CCG	4067.09	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=8.403;DP=506;FS=5.055;HRun=0;HaplotypeScore=62.0025;InbreedingCoeff=0.9630;MQ=65.96;MQ0=4;MQRankSum=0.933;QD=44.21;ReadPosRankSum=0.673;VQSLOD=5.1854;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:99:0,99,1452	0/0:6,0:6:12.04:0,12,179	0/0:17,0:15:39.11:0,39,561	0/0:12,0:6:5.16:0,5,86	1/1:2,13:16:39.13:696,39,0	0/0:26,0:25:69.16:0,69,980	0/0:14,0:14:42.14:0,42,626	0/0:24,0:24:66.19:0,66,910	1/1:0,16:16:48.16:873,48,0	0/0:13,0:13:39.12:0,39,557	0/0:13,0:13:39.11:0,39,561	0/0:16,0:16:48.15:0,48,699	0/0:14,0:14:42.11:0,42,603	1/1:1,13:14:36.12:652,36,0	1/1:2,22:24:60.20:1080,60,0	0/0:13,0:13:39.13:0,39,582	0/0:27,0:27:78.22:0,78,1139	0/0:18,0:18:54.18:0,54,805	0/0:24,0:24:72.19:0,72,1031	0/0:21,0:21:62.42:0,62,900	0/0:18,0:18:51.15:0,51,730	0/0:26,0:26:75.23:0,75,1083	0/0:15,0:15:45.14:0,45,650	0/0:10,0:10:27.09:0,27,403	1/1:3,18:22:42.14:767,42,0	0/0:23,0:22:63.18:0,63,896	0/0:23,0:23:66.20:0,66,944	0/0:8,0:8:18.03:0,18,245
chr10	54152006	.	A	ACCCTCC	16869.08	PASS	AB=0.632;AC=37;AF=0.661;AN=56;BaseQRankSum=-11.452;DP=539;FS=1.788;HRun=0;HaplotypeScore=96.6567;InbreedingCoeff=0.8899;MQ=74.85;MQ0=0;MQRankSum=-13.358;QD=56.61;ReadPosRankSum=1.519;VQSLOD=4.8490;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:69.22:0,69,1504	1/1:2,2:5:6.02:207,6,0	0/0:38,0:29:57.16:0,57,1147	0/0:51,0:34:9.08:0,9,760	1/1:4,11:15:30.10:1013,30,0	1/1:1,21:22:45.15:1554,45,0	1/1:2,17:19:39.13:1347,39,0	0/0:40,0:40:72.15:0,72,1430	1/1:0,13:13:27.09:932,27,0	1/1:4,11:18:30.10:972,30,0	1/1:2,12:14:18.06:622,18,0	0/0:13,0:13:39.12:0,39,816	0/0:17,0:17:45.15:0,45,1008	1/1:3,12:16:23.86:802,24,0	1/1:2,16:18:33.11:1067,33,0	1/1:3,16:19:39.13:1299,39,0	1/1:2,16:19:33.11:1086,33,0	1/1:2,6:8:15.05:474,15,0	1/1:5,9:15:30.10:940,30,0	1/1:1,14:16:27:716,27,0	1/1:4,10:16:18.06:602,18,0	0/0:21,0:21:63.22:0,63,1409	0/0:14,0:14:39.13:0,39,860	0/0:21,0:21:48.10:0,48,986	1/1:3,8:12:18.06:622,18,0	1/1:4,12:15:36.07:909,36,0	1/1:3,20:24:44.43:1406,44,0	0/1:5,7:12:19.42:300,0,19
chr10	54152410	.	CCTCTG	C	497.88	PASS	AB=1.000;AC=35;AF=0.921;AN=38;BaseQRankSum=-4.774;DP=262;FS=28.995;HRun=0;HaplotypeScore=47.8862;InbreedingCoeff=0.2119;MQ=76.77;MQ0=104;MQRankSum=-3.049;QD=2.57;ReadPosRankSum=-1.515;VQSLOD=0.0428;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:49,0:15:21.07:0,21,157	0/1:92,0:22:25.31:25,0,60	./.	1/1:7,0:5:8.92:69,9,0	1/1:5,0:5:7.94:34,8,0	1/1:16,0:13:21.83:89,22,0	1/1:5,0:2:3:25,3,0	1/1:6,0:2:3:28,3,0	1/1:5,0:4:3:27,3,0	./.	./.	1/1:2,0:2:0.89:2,1,0	1/1:2,0:1:2.96:19,3,0	1/1:3,0:3:5.10:25,5,0	1/1:3,0:2:5.90:40,6,0	./.	1/1:9,0:2:5.35:30,5,0	./.	1/1:9,0:7:3:27,3,0	./.	1/1:4,4:5:0.89:2,1,0	1/1:3,0:3:1.82:5,2,0	1/1:7,0:3:6:54,6,0	1/1:6,2:5:10.21:74,10,0	./.	1/1:2,0:1:3:26,3,0
chr10	54152472	.	ACCC	A	313.19	PASS	AB=0.945;AC=6;AF=0.500;AN=12;BaseQRankSum=-1.532;DP=150;FS=7.182;HRun=3;HaplotypeScore=168.1772;MQ=130.15;MQ0=16;MQRankSum=0.520;QD=2.12;ReadPosRankSum=0.739;VQSLOD=-0.4696;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/1:45,5:22:99:174,0,125	0/1:76,7:37:99:206,0,149	./.	./.	./.	./.	./.	./.	./.	./.	0/1:1,0:1:0:0,0,0	./.	./.	./.	0/0:1,0:1:2.68:0,3,11	./.	1/1:2,0:2:0.19:0,0,0	./.	./.	./.	./.	./.	0/1:1,0:1:0:0,0,0	./.	./.	./.
chr10	54154123	.	ACTCCCCTCCC	A	500.17	PASS	AB=0.875;AC=12;AF=0.333;AN=36;BaseQRankSum=-3.729;DP=266;FS=21.858;HRun=0;HaplotypeScore=94.0453;InbreedingCoeff=0.4348;MQ=108.40;MQ0=13;MQRankSum=-0.171;QD=12.82;ReadPosRankSum=-1.700;VQSLOD=0.1609;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:71,0:28:11.81:0,12,82	0/0:118,0:50:38.75:0,39,395	0/1:5,0:5:0:0,0,0	./.	1/1:9,0:4:0.81:96,1,0	0/0:3,0:3:3.01:0,3,36	0/0:2,0:2:2.94:0,3,18	1/1:2,0:2:6.02:137,6,0	./.	./.	./.	0/0:4,0:4:2.80:0,3,13	0/0:4,0:4:2.98:0,3,21	./.	0/0:5,0:2:1.25:0,1,3	0/1:0,0:1:0:0,0,0	1/1:6,0:2:6.02:124,6,0	0/0:4,0:3:0.47:0,0,1	0/1:7,0:4:0:0,0,0	0/0:2,0:2:2.22:0,2,7	./.	./.	0/1:4,0:4:0:0,0,0	1/1:0,5:5:15.03:247,15,0	0/0:1,0:1:2.50:0,2,9	./.
chr10	54154201	.	CTCTCTCTCTCTCTCTCTCTCTCTCTCTCT	C	1909.34	PASS	AC=8;AF=0.148;AN=54;BaseQRankSum=2.921;DP=246;FS=0.000;HRun=0;HaplotypeScore=138.4249;InbreedingCoeff=0.6578;MQ=43.75;MQ0=26;MQRankSum=-4.397;QD=136.38;ReadPosRankSum=2.012;VQSLOD=3.3324;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:18:29.23:0,29,3702	0/0:2,0:2:6.02:0,6,427	0/0:11,0:6:18.06:0,18,570	0/0:18,0:4:5.72:0,6,200	1/1:1,2:2:3.01:204,3,0	0/0:7,0:6:8.86:0,9,1173	0/0:23,0:17:27.25:0,27,3368	0/0:10,0:7:18.06:0,18,1146	1/1:0,3:3:9.03:712,9,0	0/0:16,0:15:45.15:0,45,3660	0/0:6,0:5:12.04:0,12,1429	0/0:2,0:2:6.02:0,6,580	0/0:4,0:4:12.04:0,12,894	./.	1/1:1,3:3:9.03:712,9,0	0/0:6,0:5:12.04:0,12,1332	0/0:8,0:3:9.03:0,9,593	0/0:12,0:11:27.09:0,27,1812	0/0:7,0:5:15.05:0,15,1268	0/0:13,0:13:33.11:0,33,3142	0/0:16,0:12:22.01:0,22,2044	0/0:7,0:6:12.98:0,13,1227	0/0:6,0:3:6.49:0,6,495	0/0:15,0:13:21.86:0,22,2499	1/1:2,2:2:6.02:412,6,0	0/0:13,0:13:33.11:0,33,3018	0/0:6,0:5:6.91:0,7,690	0/0:1,0:1:3.01:0,3,260
chr10	54154229	.	CT	C	820.58	PASS	AB=0.951;AC=30;AF=0.536;AN=56;BaseQRankSum=0.914;DP=293;FS=6.161;HRun=1;HaplotypeScore=59.3407;InbreedingCoeff=-0.0010;MQ=55.93;MQ0=15;MQRankSum=-2.312;QD=3.75;ReadPosRankSum=0.975;VQSLOD=0.1992;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:27:11.34:0,11,196	0/1:3,0:3:12.53:29,0,13	0/0:8,0:3:2.95:0,3,23	0/0:8,0:5:11.46:0,11,69	1/1:9,0:8:2.99:23,3,0	0/1:6,1:6:4.06:4,0,66	0/1:20,0:12:30.72:31,0,74	1/1:18,0:15:13.06:52,13,0	1/1:9,0:7:20.74:139,21,0	0/1:11,0:11:48.15:48,0,103	0/1:9,0:8:6.96:7,0,42	0/1:2,0:2:12.82:13,0,17	1/1:3,0:3:2.81:22,3,0	1/1:10,0:10:11.92:87,12,0	1/1:9,0:8:8.83:53,9,0	0/0:8,0:6:8.76:0,9,74	1/1:10,0:4:8.70:50,9,0	1/1:16,0:14:30.45:161,30,0	0/1:7,0:6:10.59:66,0,11	0/1:11,3:14:18.80:19,0,149	0/1:17,0:14:39.06:40,0,39	0/1:8,0:6:10.89:11,0,40	0/0:6,0:3:2.90:0,3,26	0/1:15,0:13:56.08:56,0,56	1/1:12,0:11:5.95:43,6,0	0/1:6,4:10:36.76:37,0,115	0/0:12,0:12:5.82:0,6,51	0/0:3,0:3:2.97:0,3,20
chr10	54154237	.	C	CT	2579.61	PASS	AB=0.796;AC=30;AF=0.556;AN=54;BaseQRankSum=-2.227;DP=299;FS=8.246;HRun=0;HaplotypeScore=53.1159;InbreedingCoeff=0.2965;MQ=67.87;MQ0=9;MQRankSum=-0.908;QD=11.41;ReadPosRankSum=6.165;VQSLOD=3.2755;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:7,1:26:2.26:0,2,80	0/1:2,2:4:2.62:72,0,3	0/0:13,0:8:14.86:0,15,136	0/0:9,0:6:11.61:0,12,116	1/1:3,7:10:8.90:77,9,0	0/1:7,0:7:34.58:51,0,35	0/1:4,18:15:10.97:234,0,11	0/1:20,0:18:3.33:121,0,3	1/1:6,4:8:20.97:223,21,0	1/1:3,6:9:7.42:228,7,0	1/1:1,7:7:8.96:100,9,0	0/0:2,0:2:3.01:0,3,42	0/0:4,0:4:8.89:0,9,62	1/1:1,11:12:12.03:159,12,0	1/1:5,7:11:11.90:85,12,0	0/1:3,4:6:23.37:23,0,32	1/1:1,12:7:9.01:96,9,0	1/1:16,4:18:47.25:408,47,0	1/1:1,8:8:7.81:238,8,0	0/1:10,0:11:32.56:139,0,33	1/1:2,13:13:17.90:214,18,0	./.	0/0:2,0:2:5.94:0,6,43	0/0:10,0:9:19.06:0,19,174	1/1:3,9:11:6.02:81,6,0	0/1:10,0:10:25.01:165,0,25	0/1:5,8:13:0.26:39,0,0	0/0:1,2:3:2.90:0,3,16
chr10	54155525	.	TTGTGTGTG	T	13229.69	PASS	AB=0.619;AC=33;AF=0.589;AN=56;BaseQRankSum=14.555;DP=655;FS=6.834;HRun=0;HaplotypeScore=198.2361;InbreedingCoeff=0.6804;MQ=56.28;MQ0=8;MQRankSum=-14.108;QD=31.96;ReadPosRankSum=1.585;VQSLOD=4.0740;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:66.21:0,66,2631	1/1:5,8:13:21.07:545,21,0	0/0:22,0:12:21.07:0,21,704	0/0:23,0:15:21.03:0,21,547	0/1:8,0:33:9.31:187,0,9	1/1:8,14:22:36.12:934,36,0	1/1:6,8:14:24.08:623,24,0	0/0:15,0:28:29.37:0,29,485	1/1:2,0:13:29.03:156,29,0	1/1:9,14:23:39.11:940,39,0	1/1:10,22:32:54.10:1285,54,0	0/0:22,0:24:63.22:0,63,2488	0/0:23,0:25:63.22:0,63,2485	0/1:3,0:12:0.66:86,0,1	1/1:6,1:27:9.80:298,10,0	1/1:7,29:36:72.12:1868,72,0	0/1:6,0:14:26.80:74,0,27	0/1:9,0:14:46.55:47,0,103	1/1:11,6:18:21.07:523,21,0	1/1:8,20:29:63.18:1528,63,0	1/1:10,5:15:12.04:262,12,0	0/0:25,0:24:63.20:0,63,2412	0/0:29,0:29:75.26:0,75,2823	0/0:22,0:22:54.19:0,54,2254	0/1:10,1:35:2.81:324,0,3	1/1:7,21:28:63.22:1603,63,0	1/1:4,21:25:54.19:1402,54,0	1/1:2,7:9:21.07:545,21,0
chr10	54159403	.	AT	A	3857.07	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=9.879;DP=651;FS=4.436;HRun=6;HaplotypeScore=79.8532;InbreedingCoeff=0.9955;MQ=84.94;MQ0=0;MQRankSum=1.531;QD=27.95;ReadPosRankSum=2.641;VQSLOD=4.3972;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,108,1406	0/0:11,0:11:30.09:0,30,380	0/0:22,0:22:50.83:0,51,634	0/0:18,0:18:14.94:0,15,346	1/1:1,26:27:72.14:762,72,0	0/0:25,0:25:75.23:0,75,973	0/0:18,0:18:48.14:0,48,617	0/0:29,0:29:78.23:0,78,991	1/1:2,21:23:54.14:580,54,0	0/0:25,0:25:75.24:0,75,987	0/0:14,0:14:42.13:0,42,539	0/0:25,0:25:72.21:0,72,918	0/0:30,0:30:75.23:0,75,971	1/1:1,28:29:78.20:838,78,0	1/1:1,25:26:75.19:806,75,0	0/0:21,0:21:57.13:0,57,691	0/0:26,0:26:75.23:0,75,972	0/0:10,0:10:24.01:0,24,294	0/0:30,0:30:90.27:0,90,1157	0/0:22,0:22:60.18:0,60,765	0/0:36,0:36:99:0,105,1352	0/0:12,0:12:33.07:0,33,391	0/0:18,0:18:39.13:0,39,509	0/0:23,0:22:63.20:0,63,829	1/1:0,33:33:81.20:870,81,0	0/0:26,0:26:75.18:0,75,939	0/0:19,0:19:48.16:0,48,630	0/0:14,0:14:42.10:0,42,534
chr10	54160350	.	G	GAGGGAAAGTTCA	14738.02	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-3.057;DP=711;FS=0.000;HRun=0;HaplotypeScore=238.3701;InbreedingCoeff=0.9840;MQ=86.48;MQ0=0;MQRankSum=-12.971;QD=132.77;ReadPosRankSum=-2.432;VQSLOD=3.8436;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,129,4791	0/0:15,0:15:45.13:0,45,1578	0/0:24,0:24:43.28:0,43,1758	0/0:27,0:27:67.37:0,67,1987	0/0:23,0:23:66.20:0,66,2185	0/0:25,0:25:72.23:0,72,2547	0/0:20,0:20:57.18:0,57,1960	0/0:33,0:33:87.27:0,87,2935	0/0:24,0:24:72.22:0,72,2448	0/0:37,0:37:99:0,111,4070	0/0:17,0:17:48.16:0,48,1710	0/0:28,0:28:81.25:0,81,2878	0/0:19,0:19:54.18:0,54,1955	0/0:28,0:28:81.28:0,81,3085	0/0:37,0:37:99:0,108,4030	0/0:23,0:23:69.24:0,69,2475	0/0:32,0:32:93.26:0,93,3274	0/0:17,0:17:51.18:0,51,1893	1/1:11,7:23:63.14:2591,63,0	1/1:11,15:30:84.20:4194,84,0	1/1:14,4:23:42.14:2043,42,0	0/0:26,0:26:75.23:0,75,2508	0/0:23,0:23:69.22:0,69,2296	0/0:21,0:21:60.21:0,60,2267	0/0:23,0:23:66.23:0,66,2452	0/0:31,0:31:90.31:0,90,3402	1/1:17,16:35:99:5911,102,0	0/0:3,0:3:9.03:0,9,347
chr10	54160751	.	CG	C	11693.18	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=11.386;DP=584;FS=2.667;HRun=2;HaplotypeScore=60.2156;InbreedingCoeff=0.9953;MQ=71.85;MQ0=1;MQRankSum=-2.440;QD=33.60;ReadPosRankSum=2.850;VQSLOD=5.0912;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,111,1618	1/1:1,16:17:42.14:542,42,0	0/0:6,0:6:15.02:0,15,200	0/0:11,0:11:29.81:0,30,343	1/1:0,22:22:66.17:837,66,0	1/1:0,20:20:51.17:661,51,0	1/1:0,30:30:81.26:1050,81,0	0/0:25,0:25:72.22:0,72,1036	1/1:0,22:22:54.18:700,54,0	1/1:0,29:29:87.28:1123,87,0	1/1:0,15:15:36.12:466,36,0	0/0:19,0:19:57.18:0,57,817	0/0:16,0:16:48.15:0,48,697	1/1:1,18:19:54.18:700,54,0	1/1:0,18:18:42.14:545,42,0	1/1:0,19:19:42.14:545,42,0	0/0:32,0:32:96.30:0,96,1415	0/0:21,0:20:60.20:0,60,895	1/1:0,17:17:49.35:582,49,0	1/1:0,21:21:48.16:619,48,0	1/1:0,29:29:75.24:972,75,0	0/0:27,0:27:77.47:0,77,1128	0/0:17,0:17:51.17:0,51,763	0/0:25,0:25:75.24:0,75,1096	1/1:0,26:26:63.20:815,63,0	1/1:0,21:21:63.19:794,63,0	1/1:0,16:16:42.14:545,42,0	1/1:0,7:7:15.05:195,15,0
chr10	54161585	.	CAGCTGCTGCTCCCAATCTACAGGTCCCCATGT	C	17933.68	PASS	AB=0.952;AC=19;AF=0.339;AN=56;BaseQRankSum=12.061;DP=528;FS=2.738;HRun=0;HaplotypeScore=380.7503;InbreedingCoeff=0.9061;MQ=77.84;MQ0=0;MQRankSum=-12.552;QD=101.90;ReadPosRankSum=6.071;VQSLOD=2.9895;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:0,31:31:30.10:2581,30,0	1/1:0,5:5:9.03:761,9,0	0/0:10,0:10:24.66:0,25,1016	0/0:17,0:17:31.81:0,32,1310	1/1:0,18:18:21.03:1568,21,0	0/0:16,0:16:48.15:0,48,5217	0/0:30,0:30:90.25:0,90,9926	1/1:8,0:8:23.67:194,24,0	1/1:0,22:22:36.12:3091,36,0	0/0:20,0:20:60.20:0,60,5085	0/0:13,0:13:36.10:0,36,2557	0/0:29,0:29:87.30:0,87,9635	0/0:17,0:17:51.18:0,51,5819	1/1:0,19:19:36.12:3091,36,0	1/1:0,23:23:33.11:2836,33,0	1/1:0,18:18:21.07:1804,21,0	0/0:38,0:38:99:0,114,13877	0/0:18,0:18:54.19:0,54,6919	0/0:20,0:20:60.16:0,60,4545	0/0:15,0:15:42.14:0,42,4426	0/0:36,0:36:99:0,108,12332	0/0:15,0:15:42.13:0,42,4145	0/0:11,0:11:33.11:0,33,3236	0/0:16,0:16:48.15:0,48,4871	1/1:0,12:12:21.07:1807,21,0	0/1:19,1:20:99:201,0,4996	0/0:26,0:25:72.25:0,72,8167	0/0:5,0:5:15.05:0,15,792
chr10	54162262	.	TTTTG	T	1443.38	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.212;DP=650;FS=0.667;HRun=0;HaplotypeScore=137.5146;InbreedingCoeff=0.9960;MQ=71.37;MQ0=1;MQRankSum=-1.103;QD=37.98;ReadPosRankSum=3.842;VQSLOD=4.0683;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:60.41:0,60,2139	0/0:13,0:13:36.12:0,36,901	0/0:21,0:17:18.60:0,19,402	0/0:22,0:22:48.16:0,48,1140	0/0:27,0:27:75.26:0,75,1898	0/0:34,0:34:90.31:0,90,2252	0/0:17,0:17:45.15:0,45,1120	0/0:34,0:33:84.26:0,84,1938	0/0:17,0:17:42.14:0,42,1053	0/0:30,0:30:81.28:0,81,2033	0/0:23,0:23:63.21:0,63,1576	0/0:17,0:17:48.13:0,48,1112	0/0:24,0:24:69.22:0,69,1687	0/0:14,0:14:42.14:0,42,1053	0/0:29,0:29:84.29:0,84,2120	0/0:20,0:20:51.16:0,51,1223	1/1:2,15:17:39.13:678,39,0	1/1:2,19:21:51.17:887,51,0	0/0:22,0:22:54.15:0,54,1203	0/0:24,0:24:66.20:0,66,1559	0/0:19,0:19:48.16:0,48,1195	0/0:32,0:32:90.31:0,90,2250	0/0:30,0:30:72.25:0,72,1823	0/0:13,0:12:33.11:0,33,808	0/0:23,0:22:63.19:0,63,1492	0/0:20,0:20:51.17:0,51,1233	0/0:33,0:33:87.30:0,87,2204	0/0:19,0:19:45.15:0,45,1093
chr10	54163303	.	A	AC	2327.49	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-5.862;DP=418;FS=1.204;HRun=2;HaplotypeScore=48.8153;InbreedingCoeff=0.9212;MQ=68.96;MQ0=15;MQRankSum=0.661;QD=19.89;ReadPosRankSum=-0.744;VQSLOD=3.3861;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,15:17:27.05:366,27,0	1/1:0,4:4:6.01:86,6,0	0/0:25,0:14:39.12:0,39,476	0/0:37,0:20:47.93:0,48,529	1/1:2,7:9:9.03:129,9,0	0/0:20,0:19:54.15:0,54,655	0/0:28,0:28:62.86:0,63,762	1/1:7,18:25:59.06:807,59,0	1/1:8,3:11:24.07:328,24,0	0/0:19,0:17:45.11:0,45,540	0/0:7,0:7:12.04:0,12,149	0/0:13,0:13:39.08:0,39,465	0/0:5,0:5:12.04:0,12,148	1/1:2,13:14:23.84:321,24,0	1/1:3,12:15:15:191,15,0	1/1:0,11:11:12.20:173,12,0	0/0:11,0:11:30.09:0,30,371	0/0:21,0:21:57.18:0,57,703	0/0:19,0:18:43.49:0,43,523	0/0:10,0:9:21.07:0,21,260	0/0:28,0:25:60.19:0,60,742	0/0:6,0:5:6.49:0,6,75	0/0:11,0:10:15.05:0,15,185	0/0:20,0:20:57.18:0,57,696	1/1:3,5:7:8.70:129,9,0	0/0:6,0:6:12.04:0,12,148	0/0:9,0:9:27.07:0,27,321	0/0:6,0:6:15.05:0,15,186
chr10	54163305	.	CG	C	868.89	PASS	AB=1.000;AC=16;AF=0.286;AN=56;BaseQRankSum=7.332;DP=428;FS=1.259;HRun=1;HaplotypeScore=55.9489;InbreedingCoeff=0.7752;MQ=66.79;MQ0=20;MQRankSum=0.310;QD=7.24;ReadPosRankSum=-0.473;VQSLOD=0.5231;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:18:2.12:97,2,0	0/1:7,0:6:2.12:12,0,2	0/0:24,0:13:39.12:0,39,505	0/0:37,0:20:47.08:0,47,552	1/1:8,0:8:8.82:55,9,0	0/0:19,0:19:53.77:0,54,703	0/0:28,0:28:63.17:0,63,836	1/1:24,0:24:36.73:401,37,0	1/1:5,6:11:23.81:190,24,0	0/0:19,0:17:45.12:0,45,592	0/0:7,0:7:12.04:0,12,163	0/0:16,0:15:39.60:0,40,526	0/0:4,0:4:12.04:0,12,162	1/1:15,0:14:20.34:114,20,0	1/1:13,0:14:14.59:86,15,0	0/1:12,0:12:9.70:52,0,10	0/0:12,0:12:30.03:0,30,408	0/0:23,0:22:57.19:0,57,770	0/0:20,0:18:41.74:0,42,571	0/0:10,0:9:21.07:0,21,285	0/0:29,0:27:60.20:0,60,815	0/0:4,0:4:6.49:0,6,82	0/0:12,0:10:17.99:0,18,220	0/0:21,0:21:57.12:0,57,750	1/1:9,0:8:8.42:48,8,0	0/0:6,0:6:12.04:0,12,162	0/0:8,0:9:26.68:0,27,336	0/0:5,0:5:15.05:0,15,204
chr10	54163412	.	A	AT	5123.57	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=8.323;DP=430;FS=4.164;HRun=8;HaplotypeScore=56.9409;InbreedingCoeff=0.9949;MQ=79.49;MQ0=0;MQRankSum=-1.588;QD=28.62;ReadPosRankSum=-0.264;VQSLOD=5.0681;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,23:22:57.17:658,57,0	0/0:15,0:15:36.01:0,36,329	0/0:13,0:13:26.21:0,26,221	0/0:12,0:12:14.70:0,15,151	0/0:13,0:13:33:0,33,297	1/1:1,10:11:27.08:312,27,0	1/1:4,16:20:42.12:485,42,0	0/0:21,0:21:48.02:0,48,439	0/0:16,0:16:48.03:0,48,439	1/1:1,14:15:42.12:485,42,0	1/1:1,10:11:30.08:336,30,0	0/0:20,0:20:48:0,48,439	0/0:10,0:10:20.98:0,21,187	0/0:11,0:11:33.02:0,33,302	0/0:15,0:15:38.98:0,39,348	0/0:12,0:12:29.98:0,30,269	0/0:9,0:9:27.01:0,27,247	0/0:13,0:13:36:0,36,324	1/1:4,18:21:57.16:648,57,0	1/1:0,8:8:18.05:208,18,0	1/1:0,11:11:30.09:346,30,0	0/0:16,0:16:42.01:0,42,381	0/0:15,0:15:42.02:0,42,384	0/0:19,0:19:44.92:0,45,395	0/0:21,0:21:63.02:0,63,572	1/1:2,15:17:45.13:519,45,0	1/1:8,20:28:66.17:746,66,0	1/1:1,12:13:33.10:381,33,0
chr10	54164178	.	CT	C	6231.27	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=14.302;DP=722;FS=6.267;HRun=7;HaplotypeScore=112.9923;InbreedingCoeff=0.9999;MQ=81.59;MQ0=0;MQRankSum=-6.859;QD=25.43;ReadPosRankSum=2.463;VQSLOD=4.4766;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,51:58:99:1376,135,0	1/1:2,16:18:45.10:459,45,0	0/0:27,0:26:51.26:0,51,713	0/0:16,0:17:35.70:0,36,315	1/1:4,19:23:57.12:581,57,0	0/0:35,0:35:99:0,105,1310	0/0:29,0:29:81.20:0,81,953	1/1:3,17:20:48.08:481,48,0	1/1:3,19:22:54.12:551,54,0	0/0:33,0:33:93.29:0,93,1151	0/0:24,0:24:72.21:0,72,882	0/0:21,0:21:60.19:0,60,755	0/0:31,0:31:84.27:0,84,1057	1/1:1,22:23:63.14:642,63,0	1/1:2,27:29:75.14:765,75,0	1/1:2,21:23:63.14:643,63,0	0/0:23,0:23:60.19:0,60,754	0/0:10,0:10:30.10:0,30,377	0/0:22,0:22:57.16:0,57,694	0/0:24,0:24:69.22:0,69,868	0/0:29,0:29:78.24:0,78,968	0/0:27,1:28:47.65:0,48,901	0/0:23,0:23:63.17:0,63,766	0/0:31,0:31:87.28:0,87,1086	1/1:3,26:29:72.16:734,72,0	0/0:21,0:21:57.17:0,57,697	0/0:38,0:38:99:0,111,1370	0/0:11,0:11:33.03:0,33,357
chr10	54164396	.	CTTTG	C	12841.51	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=9.866;DP=693;FS=4.521;HRun=0;HaplotypeScore=118.3383;InbreedingCoeff=0.9959;MQ=66.70;MQ0=4;MQRankSum=1.818;QD=27.62;ReadPosRankSum=0.968;VQSLOD=4.7771;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,20:31:42.14:678,42,0	1/1:4,8:11:21.07:339,21,0	0/0:22,0:19:30.10:0,30,649	0/0:28,0:24:29.97:0,30,641	1/1:16,19:35:57.12:864,57,0	1/1:10,18:28:48.16:775,48,0	1/1:10,15:25:39.10:602,39,0	1/1:17,8:25:21.07:339,21,0	1/1:6,22:28:45.15:727,45,0	1/1:5,18:24:54.14:800,54,0	1/1:9,16:25:42.10:650,42,0	0/0:30,0:30:42.13:0,42,950	0/0:22,0:22:54.16:0,54,1225	1/1:9,20:29:60.20:969,60,0	1/1:5,23:28:63.21:1018,63,0	1/1:6,10:15:21.07:339,21,0	0/0:18,0:18:30.04:0,30,576	0/0:13,0:13:26.66:0,27,540	1/1:17,6:23:18.01:239,18,0	1/1:8,16:24:42.10:650,42,0	1/1:5,20:24:54.18:872,54,0	0/0:26,1:27:23.72:0,24,1514	0/0:29,0:29:69.19:0,69,1529	0/0:39,0:39:78.21:0,78,1720	1/1:2,16:18:45.15:727,45,0	1/1:9,23:32:72.20:1090,72,0	1/1:5,22:27:45.15:727,45,0	1/1:1,9:10:27.09:436,27,0
chr10	54165295	.	GGGGTGTGTGTGTGT	G	3002.03	PASS	AB=0.939;AC=22;AF=0.393;AN=56;BaseQRankSum=3.381;DP=658;FS=6.867;HRun=0;HaplotypeScore=207.7043;InbreedingCoeff=0.3786;MQ=55.94;MQ0=39;MQRankSum=-3.169;QD=9.27;ReadPosRankSum=0.589;VQSLOD=1.4963;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:38:75.20:0,75,1679	1/1:10,0:10:23.94:228,24,0	0/0:30,0:13:31.99:0,32,328	0/0:44,0:24:18.32:0,18,221	1/1:18,0:18:44.48:345,44,0	0/1:24,0:24:99:101,0,281	0/0:24,0:22:62.31:0,62,489	1/1:21,0:21:62.89:538,63,0	1/1:4,18:21:9.43:197,9,0	0/1:26,0:25:99:161,0,468	0/1:24,0:24:99:120,0,191	0/0:23,0:21:59.09:0,59,919	0/0:22,0:21:53.99:0,54,686	1/1:1,21:21:5.06:151,5,0	0/1:1,17:18:2.34:310,0,2	1/1:0,0:24:11.97:371,12,0	0/0:27,0:25:69.08:0,69,975	0/0:11,0:9:26.99:0,27,419	0/1:18,0:13:99:117,0,305	0/1:21,0:20:30.64:31,0,247	0/0:41,0:35:64.62:0,65,534	0/0:17,0:17:32.43:0,32,656	0/0:19,0:18:38.92:0,39,708	0/0:26,0:25:64.37:0,64,1670	1/1:0,0:17:5.75:115,6,0	0/1:35,0:34:76.09:76,0,539	0/1:22,0:21:99:334,0,292	0/0:9,0:7:20.88:0,21,160
chr10	54165920	.	C	CAA	1590.36	PASS	AB=0.925;AC=16;AF=0.286;AN=56;BaseQRankSum=0.182;DP=500;FS=3.215;HRun=14;HaplotypeScore=85.9727;InbreedingCoeff=0.5850;MQ=74.65;MQ0=2;MQRankSum=0.079;QD=7.54;ReadPosRankSum=-3.753;VQSLOD=0.3914;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:23:43.97:0,44,338	0/0:8,0:11:14.38:0,14,140	0/0:24,0:19:6.21:0,6,64	0/0:23,0:16:11.14:0,11,86	1/1:9,21:30:39.79:678,40,0	0/0:13,0:16:11.61:0,12,264	0/0:9,0:10:8.62:0,9,62	1/1:4,11:19:36.01:352,36,0	1/1:8,6:15:11.40:126,11,0	0/1:20,0:25:19.53:20,0,239	0/0:17,0:18:26.51:0,27,212	0/0:13,0:13:8.42:0,8,62	0/0:19,0:21:0.71:0,1,103	1/1:7,7:14:6.02:72,6,0	1/1:7,13:21:9.03:109,9,0	0/1:13,0:15:21.72:22,0,180	0/0:17,0:20:22.54:0,23,160	0/0:11,0:11:20.76:0,21,175	0/1:10,0:12:0.33:0,0,125	0/0:18,0:18:30.92:0,31,273	0/0:10,0:10:17.92:0,18,150	0/0:9,0:10:17.68:0,18,137	0/0:9,0:11:8.68:0,9,117	0/0:9,0:9:14.64:0,15,125	1/1:11,17:32:33.04:387,33,0	0/1:24,0:27:1.31:1,0,191	0/0:26,0:25:26.18:0,26,225	0/0:8,0:10:20.66:0,21,204
chr10	54166469	.	G	GT	6431.63	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-14.444;DP=665;FS=2.273;HRun=8;HaplotypeScore=61.3070;InbreedingCoeff=0.9994;MQ=75.89;MQ0=0;MQRankSum=-0.614;QD=27.84;ReadPosRankSum=0.009;VQSLOD=5.2609;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:9,21:31:53.99:603,54,0	1/1:1,9:10:27.04:297,27,0	0/0:22,0:22:44.95:0,45,401	0/0:16,0:16:23.98:0,24,219	1/1:3,28:31:81.16:903,81,0	0/0:20,0:20:57.03:0,57,521	0/0:19,0:19:54:0,54,489	1/1:8,27:35:81.23:924,81,0	1/1:1,23:24:69.21:796,69,0	0/0:26,0:26:75.04:0,75,687	0/0:25,0:25:69.03:0,69,632	0/0:28,0:28:81.04:0,81,741	0/0:25,0:25:63.02:0,63,577	1/1:2,20:22:54.16:623,54,0	1/1:4,20:24:54.16:623,54,0	1/1:5,24:29:72.21:831,72,0	0/0:23,0:23:57.02:0,57,522	0/0:10,0:10:30.02:0,30,275	0/0:23,0:23:48.01:0,48,439	0/0:36,0:36:99:0,99,906	0/0:14,0:14:39.02:0,39,357	0/0:24,0:24:63.03:0,63,576	0/0:24,0:24:66.04:0,66,604	0/0:28,0:28:72.02:0,72,653	1/1:0,25:25:72.21:831,72,0	0/0:35,0:35:93.04:0,93,851	0/0:23,0:23:56.94:0,57,504	0/0:13,0:13:33:0,33,302
chr10	54166737	.	GACAC	G	436.04	PASS	AB=0.887;AC=15;AF=0.300;AN=50;BaseQRankSum=0.992;DP=512;FS=5.184;HRun=0;HaplotypeScore=87.7386;InbreedingCoeff=0.1269;MQ=61.31;MQ0=20;MQRankSum=1.003;QD=2.33;ReadPosRankSum=2.242;VQSLOD=1.1727;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	1/1:5,0:5:0.39:1,0,0	./.	./.	0/0:23,0:22:14.75:0,15,202	0/0:16,0:15:11.74:0,12,175	0/0:19,0:18:9.03:0,9,192	0/0:15,0:12:2.94:0,3,18	0/0:5,0:11:3.01:0,3,52	0/0:19,0:20:23.22:0,23,190	0/1:12,0:13:13.88:49,0,14	0/0:18,0:18:15.03:0,15,286	0/0:11,0:13:11.44:0,11,166	0/0:17,0:17:5.89:0,6,76	0/0:21,0:20:9.41:0,9,133	0/1:7,3:10:27.15:37,0,27	0/1:25,10:35:7.96:83,0,8	0/1:22,1:22:68.53:73,0,69	1/1:12,0:12:9.20:83,9,0	1/1:8,7:16:8.76:104,9,0	1/1:19,0:16:2.75:25,3,0	0/0:15,0:15:6.01:0,6,95	0/0:7,0:7:9:0,9,143	0/1:23,0:22:9.54:10,0,204	0/0:17,0:17:9.02:0,9,118	0/1:19,1:19:33.80:34,0,55	0/1:8,2:10:7.96:83,0,8	0/0:9,0:8:6.48:0,6,36
chr10	54168115	.	ATCTCTCTC	A	828.42	PASS	AB=1.000;AC=21;AF=0.420;AN=50;BaseQRankSum=0.428;DP=504;FS=15.579;HRun=0;HaplotypeScore=135.9051;InbreedingCoeff=0.5409;MQ=64.31;MQ0=13;MQRankSum=-0.236;QD=4.93;ReadPosRankSum=1.182;VQSLOD=1.7678;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:10.54:0,11,122	1/1:4,0:4:0.47:1,0,0	./.	./.	0/0:16,0:14:5.97:0,6,46	0/0:14,4:17:3:0,3,28	1/1:20,0:20:3.62:99,4,0	0/0:32,0:32:0.47:0,0,1	0/0:19,0:18:9.03:0,9,127	1/1:14,1:15:3.01:74,3,0	1/1:10,0:10:1.82:5,2,0	0/0:26,0:24:6.02:0,6,142	0/0:14,0:14:12.51:0,13,255	0/0:13,0:13:8.23:0,8,133	./.	0/0:13,0:13:12.14:0,12,244	0/0:12,0:12:5.05:0,5,46	0/0:18,0:18:25.60:0,26,552	1/1:13,2:14:2.26:132,2,0	1/1:17,0:17:8.94:112,9,0	1/1:24,0:23:9.03:152,9,0	0/0:16,0:16:3.01:0,3,40	0/1:20,0:20:2.85:3,0,35	0/0:29,0:27:23.83:0,24,551	0/0:20,0:20:6.01:0,6,65	1/1:11,5:16:7.33:216,7,0	1/1:18,0:18:3.01:71,3,0	1/1:8,0:7:6.02:115,6,0
chr10	54168199	.	C	CAG	2830.73	PASS	AB=0.571;AC=38;AF=0.704;AN=54;BaseQRankSum=-0.159;DP=452;FS=0.607;HRun=0;HaplotypeScore=98.0265;InbreedingCoeff=0.7630;MQ=77.58;MQ0=16;MQRankSum=-5.001;QD=10.07;ReadPosRankSum=0.424;VQSLOD=3.3536;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:21:35.83:171,36,0	1/1:4,0:4:8.96:69,9,0	0/0:34,0:18:32.76:0,33,357	0/0:52,0:37:55.73:0,56,492	1/1:2,0:12:7.07:36,7,0	1/1:14,0:14:16.42:81,16,0	1/1:22,0:21:29.32:206,29,0	1/1:19,0:18:47.74:439,48,0	./.	1/1:14,0:12:29.62:206,30,0	1/1:8,0:8:7.97:55,8,0	0/0:11,0:10:11.71:0,12,100	0/0:13,0:13:8.77:0,9,107	0/1:4,0:19:0.15:0,0,0	1/1:4,16:19:3.01:35,3,0	1/1:15,0:15:17.45:138,17,0	1/1:10,0:9:23.87:228,24,0	1/1:10,0:10:18.97:152,19,0	1/1:11,0:11:26.56:222,27,0	1/1:1,8:9:2.96:19,3,0	1/1:11,0:11:25.56:274,26,0	0/0:12,0:11:3.88:0,4,27	0/0:8,0:8:4.45:0,4,31	0/0:26,0:26:8.04:0,8,173	0/1:2,5:7:0:0,0,0	1/1:15,0:15:32.97:191,33,0	1/1:17,0:16:27.36:289,27,0	1/1:19,0:17:33.04:194,33,0
chr10	54169105	.	AG	A	9706.86	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=14.861;DP=691;FS=0.000;HRun=3;HaplotypeScore=68.4259;InbreedingCoeff=0.9997;MQ=87.76;MQ0=0;MQRankSum=-8.666;QD=35.30;ReadPosRankSum=0.600;VQSLOD=5.2612;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:93.25:0,93,1295	0/0:9,0:9:27.09:0,27,389	0/0:30,0:30:84.20:0,84,1125	0/0:17,0:17:48.11:0,48,650	0/0:21,0:21:63.20:0,63,889	1/1:0,20:20:54.17:670,54,0	1/1:0,34:34:99:1228,99,0	0/0:29,0:29:81.25:0,81,1118	0/0:25,0:25:75.24:0,75,1062	1/1:1,36:37:99:1339,108,0	1/1:0,19:19:57.18:707,57,0	0/0:32,0:32:93.31:0,93,1339	0/0:17,0:17:51.17:0,51,734	0/0:30,0:30:84.27:0,84,1191	0/0:29,0:29:81.23:0,81,1127	0/0:18,0:18:54.18:0,54,778	0/0:23,0:23:66.22:0,66,950	0/0:13,0:13:36.12:0,36,518	1/1:0,22:22:66.21:817,66,0	1/1:1,27:28:78.24:967,78,0	1/1:2,39:41:99:1413,114,0	0/0:24,0:24:72.24:0,72,1034	0/0:19,0:19:57.19:0,57,819	0/0:28,0:28:84.27:0,84,1192	0/0:18,0:18:54.18:0,54,778	1/1:0,29:29:84.26:1042,84,0	1/1:1,35:36:96.30:1190,96,0	1/1:0,9:9:27.08:335,27,0
chr10	54170812	.	AGAGGCT	A	9175.57	PASS	AB=0.519;AC=15;AF=0.268;AN=56;BaseQRankSum=15.906;DP=684;FS=8.385;HRun=0;HaplotypeScore=144.3831;InbreedingCoeff=0.9077;MQ=82.13;MQ0=0;MQRankSum=-16.646;QD=53.35;ReadPosRankSum=-0.338;VQSLOD=4.7065;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:48:99:0,138,4773	0/0:13,0:13:39.13:0,39,1350	0/0:23,0:23:63.17:0,63,2092	0/0:21,0:21:60.20:0,60,1918	1/1:0,18:18:54.14:1189,54,0	0/0:21,0:21:60.21:0,60,2150	0/0:43,0:43:99:0,102,3948	1/1:4,26:30:78.26:1802,78,0	1/1:2,24:26:69.24:1658,69,0	0/0:27,0:27:72.25:0,72,2546	0/0:23,0:23:69.24:0,69,2415	0/0:29,0:29:81.28:0,81,2852	0/0:23,0:23:63.22:0,63,2258	1/1:1,10:11:24.08:504,24,0	0/1:2,25:27:41.97:1411,0,42	0/0:26,0:26:78.25:0,78,2667	1/1:3,16:19:30.10:682,30,0	1/1:2,10:12:21.07:505,21,0	0/0:23,0:23:66.23:0,66,2326	0/0:30,0:30:84.05:0,84,2551	0/0:31,0:31:90.29:0,90,3047	0/0:30,0:30:87.28:0,87,2998	0/0:14,0:14:39.13:0,39,1290	0/0:16,0:16:48.16:0,48,1731	1/1:2,27:29:60.21:1425,60,0	0/0:26,0:25:75.26:0,75,2582	0/0:26,0:26:75.22:0,75,2537	0/0:18,0:18:54.19:0,54,1945
chr10	54173634	.	C	CG	2628.33	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=3.145;DP=348;FS=0.000;HRun=0;HaplotypeScore=77.8561;InbreedingCoeff=0.8183;MQ=86.11;MQ0=0;MQRankSum=-1.250;QD=26.28;ReadPosRankSum=1.815;VQSLOD=4.3288;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:31.87:0,32,192	0/0:9,0:9:19.96:0,20,120	0/0:8,0:8:17.64:0,18,198	0/0:16,0:16:25.61:0,26,350	0/0:4,1:5:1.67:0,2,8	0/0:12,0:12:34.84:0,35,244	0/0:30,0:30:86.85:0,87,598	1/1:0,8:8:21.04:217,21,0	1/1:1,7:8:24:256,24,0	0/0:9,0:9:22.85:0,23,167	0/0:1,0:1:3:0,3,28	0/0:17,0:17:51.17:0,51,711	0/0:9,0:9:27.09:0,27,372	1/1:0,19:19:50.89:629,51,0	1/1:1,8:9:21.07:262,21,0	0/0:7,0:7:16.70:0,17,117	1/1:2,17:19:46.36:618,46,0	1/1:1,22:23:54.17:673,54,0	0/1:7,0:7:11.94:12,0,58	0/0:5,0:5:11.83:0,12,91	0/0:45,0:45:92.37:0,92,710	0/0:8,0:8:21.07:0,21,288	0/0:6,0:6:12.04:0,12,166	0/0:29,0:29:84.28:0,84,1170	1/1:1,6:7:11.99:155,12,0	0/0:11,0:11:31.86:0,32,208	0/0:3,0:3:8.81:0,9,60	0/0:5,0:5:11.74:0,12,79
chr10	54174151	.	T	TTGTG	2513.38	PASS	AB=1.000;AC=33;AF=0.635;AN=52;BaseQRankSum=1.829;DP=641;FS=0.807;HRun=0;HaplotypeScore=143.5705;InbreedingCoeff=0.4668;MQ=64.81;MQ0=8;MQRankSum=-1.783;QD=6.03;ReadPosRankSum=-3.589;VQSLOD=1.7588;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:2.57:0,3,172	1/1:9,0:9:9.02:149,9,0	./.	./.	1/1:17,0:17:3.01:48,3,0	0/1:19,0:18:34.27:95,0,34	1/1:28,0:28:8.84:165,9,0	1/1:34,0:34:12.98:219,13,0	1/1:20,0:18:6.90:81,7,0	1/1:23,5:29:25.86:308,26,0	0/1:15,0:15:34.24:181,0,34	0/0:20,0:23:9.01:0,9,84	0/0:19,0:19:18.05:0,18,253	0/1:22,0:21:0.01:0,0,0	1/1:18,0:18:14.94:190,15,0	1/1:29,0:29:9.42:122,9,0	1/1:20,0:20:12.01:138,12,0	1/1:23,0:22:15.05:222,15,0	1/1:24,0:23:2.74:12,3,0	0/0:14,0:14:3.01:0,3,43	0/0:44,0:44:8.94:0,9,91	0/1:15,0:14:22.99:39,0,23	0/0:16,0:16:8.92:0,9,138	0/0:28,0:29:15.09:0,15,270	1/1:19,0:18:9.02:137,9,0	1/1:30,0:30:33.87:471,34,0	0/1:28,0:26:1.69:2,0,185	1/1:17,0:17:9.47:105,9,0
chr10	54174168	.	T	TGTGT	1773.43	PASS	AB=1.000;AC=32;AF=0.615;AN=52;BaseQRankSum=-2.843;DP=613;FS=0.000;HRun=0;HaplotypeScore=105.7483;InbreedingCoeff=0.4466;MQ=49.94;MQ0=15;MQRankSum=0.217;QD=5.07;ReadPosRankSum=-3.942;VQSLOD=1.0250;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:38:2.57:0,3,171	1/1:8,0:8:9.02:149,9,0	0/1:22,0:5:0:0,0,0	./.	1/1:15,0:15:3.01:48,3,0	0/1:17,0:16:34.27:94,0,34	1/1:27,0:27:8.95:165,9,0	1/1:19,0:19:5.92:16,6,0	1/1:17,0:15:3.56:29,4,0	1/1:27,0:27:19.27:222,19,0	0/1:12,0:12:34.24:181,0,34	0/0:22,0:22:9.01:0,9,84	0/0:19,0:19:18.05:0,18,253	./.	1/1:19,0:19:8.94:104,9,0	1/1:29,0:29:2.72:51,3,0	1/1:22,0:22:5.99:74,6,0	1/1:24,0:23:6.49:75,6,0	1/1:19,0:17:2.74:12,3,0	0/0:18,0:17:3.01:0,3,43	0/0:54,0:54:8.94:0,9,91	0/1:19,0:18:15.96:42,0,16	0/0:16,0:16:9.03:0,9,138	0/0:25,0:25:15.09:0,15,270	1/1:17,0:16:6.02:108,6,0	1/1:18,7:25:33.41:468,33,0	0/0:28,0:26:14.20:0,14,202	1/1:11,0:11:9:104,9,0
chr10	54175903	.	CA	C	6979.49	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=12.743;DP=680;FS=15.740;HRun=1;HaplotypeScore=69.1841;InbreedingCoeff=0.9972;MQ=92.63;MQ0=0;MQRankSum=-6.416;QD=34.90;ReadPosRankSum=6.005;VQSLOD=3.1141;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,138,1985	0/0:11,0:11:30.07:0,30,446	0/0:32,0:32:80.55:0,81,1216	0/0:26,0:26:78.15:0,78,1076	1/1:0,15:15:38.86:511,39,0	0/0:17,0:17:51.16:0,51,786	0/0:28,0:28:84.25:0,84,1269	1/1:10,18:28:77.92:928,78,0	1/1:0,21:21:48.16:668,48,0	0/0:25,0:25:66.20:0,66,956	0/0:12,0:12:36.10:0,36,518	0/0:25,0:25:71.58:0,72,1054	0/0:35,0:35:99:0,102,1485	1/1:0,30:30:78.26:1081,78,0	1/1:0,25:25:72.24:997,72,0	0/0:19,0:19:57.16:0,57,841	1/1:0,29:29:69.23:958,69,0	1/1:0,22:22:54.18:752,54,0	0/0:12,0:12:36.12:0,36,568	0/0:26,0:26:78.17:0,78,1064	0/0:42,0:42:99:0,123,1839	0/0:20,0:20:60.15:0,60,899	0/0:16,0:16:48.11:0,48,664	0/0:38,0:38:99:0,111,1691	1/1:0,30:30:78.26:1084,78,0	0/0:17,0:17:51.17:0,51,808	0/0:27,0:27:81.24:0,81,1217	0/0:5,0:5:15.05:0,15,236
chr10	54176037	.	C	CA	21699.58	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=7.337;DP=712;FS=1.128;HRun=2;HaplotypeScore=104.5840;InbreedingCoeff=0.9995;MQ=82.93;MQ0=0;MQRankSum=-4.443;QD=38.54;ReadPosRankSum=0.890;VQSLOD=4.7723;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,51:51:99:2071,144,0	1/1:1,11:12:30.10:432,30,0	0/0:18,0:18:47.88:0,48,553	0/0:22,0:22:38.35:0,38,452	1/1:1,27:28:78.26:1121,78,0	1/1:1,23:24:69.23:993,69,0	1/1:2,28:30:78.26:1123,78,0	1/1:3,25:29:75.23:1044,75,0	1/1:2,29:31:78.26:1122,78,0	1/1:1,30:31:90.28:1260,90,0	1/1:1,8:9:24.51:323,25,0	0/0:21,0:21:63.19:0,63,768	0/0:29,0:29:87.27:0,87,1076	1/1:1,35:36:99:1467,102,0	1/1:1,26:27:72.24:1037,72,0	1/1:1,19:20:51.17:734,51,0	1/1:1,31:32:90.30:1295,90,0	1/1:0,20:20:51.14:713,51,0	1/1:2,20:22:59.90:806,60,0	1/1:0,20:20:57.05:749,57,0	1/1:2,50:52:99:2018,141,0	0/0:19,0:19:48.13:0,48,581	0/0:12,0:12:36.11:0,36,446	0/0:28,0:28:81.25:0,81,1003	1/1:1,24:25:60.20:863,60,0	1/1:0,24:24:72.23:1018,72,0	1/1:2,22:23:60.20:863,60,0	1/1:0,16:16:45.15:648,45,0
chr10	54176208	.	ACT	A	15648.78	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=10.066;DP=692;FS=3.935;HRun=0;HaplotypeScore=113.2682;InbreedingCoeff=0.9977;MQ=82.73;MQ0=2;MQRankSum=-5.112;QD=31.74;ReadPosRankSum=3.618;VQSLOD=7.2215;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,26:26:69.22:878,69,0	1/1:0,7:7:18.06:229,18,0	0/0:32,0:31:63.13:0,63,900	0/0:38,0:35:68.32:0,68,1055	1/1:6,16:22:54.17:682,54,0	1/1:1,17:18:48.15:611,48,0	1/1:1,19:20:57.18:726,57,0	1/1:5,26:31:75.22:940,75,0	1/1:5,34:39:93.30:1184,93,0	1/1:3,18:21:54.17:688,54,0	1/1:0,19:19:54.17:688,54,0	0/0:24,0:24:63.22:0,63,1054	0/0:25,0:25:72.25:0,72,1196	1/1:3,36:38:96.31:1222,96,0	1/1:2,25:27:66.21:840,66,0	1/1:3,22:25:60.19:764,60,0	1/1:2,31:33:78.25:993,78,0	1/1:3,13:16:33.11:420,33,0	1/1:5,12:17:36.12:458,36,0	1/1:4,22:26:63.20:802,63,0	1/1:3,23:26:66.21:840,66,0	0/0:30,0:30:84.29:0,84,1389	0/0:25,0:25:69.24:0,69,1152	0/0:25,0:25:69.20:0,69,1102	1/1:3,21:24:60.19:764,60,0	1/1:1,29:30:87.25:1079,87,0	1/1:5,15:20:45.14:573,45,0	1/1:0,7:7:21.07:267,21,0
chr10	54177255	.	A	AAGGCTGGTC	51427.76	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=-7.878;DP=695;FS=2.380;HRun=0;HaplotypeScore=176.5481;InbreedingCoeff=0.9981;MQ=82.19;MQ0=0;MQRankSum=-17.790;QD=101.44;ReadPosRankSum=0.360;VQSLOD=5.2019;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:17,22:44:75.26:3419,75,0	1/1:4,9:13:33.11:1459,33,0	0/0:22,0:22:48.05:0,48,1083	0/0:33,0:34:90.27:0,90,2364	1/1:7,12:23:48.16:2073,48,0	1/1:7,8:21:42.14:1914,42,0	1/1:16,12:29:75.26:3192,75,0	1/1:18,8:32:81.19:2934,81,0	1/1:12,12:25:63.22:2632,63,0	1/1:14,13:30:84.27:3497,84,0	1/1:7,9:16:30.10:1392,30,0	0/0:31,0:31:90.31:0,90,2663	0/0:29,0:29:84.25:0,84,2326	1/1:11,18:31:81.23:3441,81,0	1/1:13,22:36:93.32:4020,93,0	1/1:10,16:27:78.27:3559,78,0	1/1:11,8:25:39.13:1846,39,0	1/1:8,16:26:69.19:3080,69,0	1/1:13,6:22:57.18:2210,57,0	1/1:4,15:22:48.16:2229,48,0	1/1:13,6:22:27.09:1177,27,0	0/0:17,0:17:48.16:0,48,1374	0/0:21,0:21:63.21:0,63,1835	0/0:34,0:34:90.31:0,90,2711	1/1:4,9:15:33.11:1523,33,0	1/1:4,15:20:54.19:2472,54,0	1/1:6,14:22:54.19:2492,54,0	1/1:0,6:6:18.06:867,18,0
chr10	54177659	.	A	AAGAACGC	47060.50	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=-4.181;DP=664;FS=7.122;HRun=0;HaplotypeScore=144.7624;InbreedingCoeff=0.9936;MQ=67.09;MQ0=0;MQRankSum=-16.524;QD=90.15;ReadPosRankSum=-2.028;VQSLOD=5.3296;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:21,23:45:99:3753,102,0	1/1:2,8:11:24.08:893,24,0	0/0:18,0:18:42.13:0,42,932	0/0:13,0:13:27.09:0,27,619	1/1:8,11:21:36.12:1185,36,0	1/1:5,20:26:72.25:2757,72,0	1/1:11,12:26:63.22:2396,63,0	1/1:16,11:32:87.26:2809,87,0	1/1:9,14:24:66.23:2498,66,0	1/1:7,28:39:99:4206,114,0	1/1:7,17:25:57.20:2072,57,0	0/0:23,0:23:66.22:0,66,1608	0/0:30,0:30:87.19:0,87,2179	1/1:6,25:33:81.28:3181,81,0	1/1:7,23:31:84.29:3128,84,0	1/1:10,15:30:60.21:2212,60,0	1/1:4,13:19:51.18:1872,51,0	1/1:8,7:16:33.11:1272,33,0	1/1:6,6:13:33.10:1135,33,0	1/1:10,23:33:87.30:3229,87,0	1/1:7,11:19:45.15:1494,45,0	0/0:21,0:21:63.22:0,63,1601	0/0:17,0:17:48.16:0,48,1201	0/0:20,0:20:60.21:0,60,1539	1/1:7,8:17:30.10:1104,30,0	1/1:6,21:29:78.25:2860,78,0	1/1:8,15:26:66.23:2548,66,0	1/1:2,4:7:12.04:455,12,0
chr10	54178771	.	GGTTGTTTTGTT	G	1765.33	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.061;DP=416;FS=0.000;HRun=0;HaplotypeScore=143.5913;InbreedingCoeff=0.9762;MQ=73.15;MQ0=2;MQRankSum=-4.439;QD=76.75;ReadPosRankSum=2.128;VQSLOD=3.6362;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:32.47:0,32,1142	1/1:0,10:10:24.08:827,24,0	0/0:23,0:18:19.07:0,19,1095	0/0:28,0:17:25.73:0,26,772	0/0:15,0:15:44.90:0,45,1760	0/0:19,0:19:57.19:0,57,2889	0/0:14,0:14:42.13:0,42,2004	0/0:15,0:15:41.81:0,42,1884	0/0:8,0:8:21.07:0,21,1066	0/0:18,0:18:54.15:0,54,2077	0/0:9,0:9:27.09:0,27,1177	0/0:21,0:21:63.21:0,63,3105	0/0:13,0:13:39.12:0,39,1934	0/0:8,0:8:17.89:0,18,776	0/0:15,0:15:44.98:0,45,2077	1/1:1,12:13:30.10:1059,30,0	0/0:27,0:27:66.16:0,66,2943	0/0:28,0:28:65.49:0,65,2189	0/0:16,0:15:38.62:0,39,1347	0/0:9,0:9:20.56:0,21,611	0/0:6,0:6:17.89:0,18,779	0/0:17,0:17:51.17:0,51,2455	0/0:9,0:9:27.09:0,27,1321	0/0:11,0:11:33.11:0,33,1681	0/0:14,0:14:33.11:0,33,1580	0/0:15,0:15:42.61:0,43,2006	0/0:14,0:14:20.79:0,21,963	0/0:7,0:7:21.07:0,21,1115
chr10	54179081	.	A	AT	12191.24	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=-11.190;DP=567;FS=7.108;HRun=8;HaplotypeScore=51.2899;InbreedingCoeff=0.9800;MQ=79.20;MQ0=1;MQRankSum=-2.069;QD=27.03;ReadPosRankSum=2.803;VQSLOD=5.4953;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,44:47:99:1316,114,0	1/1:2,8:10:27.06:299,27,0	0/0:15,0:14:6.50:0,7,173	0/0:13,0:13:23.40:0,23,187	1/1:2,25:27:72.21:824,72,0	1/1:5,22:27:60.18:693,60,0	1/1:2,20:22:48.14:554,48,0	1/1:1,21:22:63.15:697,63,0	1/1:5,14:19:39.10:437,39,0	1/1:3,13:17:41.96:463,42,0	1/1:1,12:14:39.11:444,39,0	0/0:15,0:15:33:0,33,302	0/0:26,1:28:36.44:0,36,571	1/1:3,23:26:69.19:785,69,0	1/1:7,22:29:60.18:692,60,0	1/1:1,10:11:27.08:312,27,0	1/1:2,19:21:54.16:623,54,0	1/1:3,16:19:42.12:485,42,0	1/1:9,13:22:42.12:485,42,0	1/1:7,22:29:63.15:712,63,0	1/1:1,15:16:41.96:465,42,0	0/0:16,0:16:45.02:0,45,411	0/0:17,0:17:48:0,48,432	0/0:12,0:12:36.02:0,36,329	1/1:2,16:18:39.12:450,39,0	1/1:2,20:22:60.14:669,60,0	1/1:6,18:24:51.14:580,51,0	1/1:1,6:7:18.05:208,18,0
chr10	54181277	.	A	ATGTGTGTG	8683.32	PASS	AB=1.000;AC=42;AF=0.808;AN=52;BaseQRankSum=-0.852;DP=475;FS=35.416;HRun=0;HaplotypeScore=216.2004;InbreedingCoeff=0.3788;MQ=60.71;MQ0=0;MQRankSum=-4.317;QD=21.76;ReadPosRankSum=-7.188;VQSLOD=1.2600;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:22:6.88:42,7,0	./.	1/1:14,0:15:8.48:318,8,0	0/1:11,0:11:89.56:151,0,90	1/1:20,2:23:3.94:26,4,0	1/1:21,0:20:3.01:114,3,0	1/1:19,0:19:15.92:400,16,0	1/1:23,0:23:15.04:408,15,0	1/1:9,0:9:6.02:81,6,0	1/1:11,0:11:27.08:755,27,0	1/1:20,0:19:3.95:52,4,0	0/0:17,0:17:18.12:0,18,152	0/1:16,0:16:45.04:45,0,205	1/1:14,0:14:0.47:1,0,0	1/1:26,0:25:21.02:491,21,0	./.	1/1:20,0:20:36.59:1323,37,0	0/1:10,0:10:1.16:659,0,1	1/1:10,5:15:30.10:990,30,0	1/1:20,0:19:9.50:284,10,0	1/1:11,0:11:6.49:140,6,0	0/0:26,0:26:27.24:0,27,266	0/0:22,0:22:19.66:0,20,131	0/1:29,0:29:74.31:74,0,182	1/1:20,0:20:0.47:1,0,0	1/1:21,0:23:51.16:1488,51,0	1/1:14,0:14:18.49:578,18,0	1/1:4,0:4:9.03:262,9,0
chr10	54181331	.	CACACAG	C	1582.28	PASS	AB=0.793;AC=24;AF=0.462;AN=52;BaseQRankSum=-1.921;DP=479;FS=7.102;HRun=0;HaplotypeScore=123.6563;InbreedingCoeff=0.7339;MQ=65.15;MQ0=10;MQRankSum=-2.843;QD=8.24;ReadPosRankSum=0.900;VQSLOD=2.1022;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:18:32.84:253,33,0	1/1:4,0:3:3:25,3,0	0/0:27,0:16:44.86:0,45,346	0/0:28,0:16:45.21:0,45,429	./.	0/0:15,0:15:12.01:0,12,252	0/0:18,0:18:24.05:0,24,512	1/1:22,0:19:39.31:367,39,0	1/1:9,1:9:14.92:116,15,0	0/0:15,0:14:42.09:0,42,680	0/0:12,0:12:23.71:0,24,185	0/0:17,0:17:47.05:0,47,680	0/0:19,0:18:39.11:0,39,998	./.	1/1:2,16:17:5.69:89,6,0	0/1:7,0:7:57.78:58,0,58	0/1:5,12:16:15.66:44,0,16	1/1:1,11:12:3.31:73,3,0	1/1:15,0:14:38.64:288,39,0	1/1:25,1:25:6.01:70,6,0	1/1:9,0:8:11.89:84,12,0	0/0:22,0:22:35.37:0,35,599	0/0:19,0:19:42.02:0,42,735	0/0:23,0:23:51.09:0,51,1169	1/1:1,17:18:5.88:36,6,0	0/0:23,0:22:56.49:0,56,1010	1/1:16,0:15:35.73:280,36,0	0/0:10,0:10:29.90:0,30,391
chr10	54181335	.	CAG	C	1728.67	PASS	AC=26;AF=0.481;AN=54;BaseQRankSum=-1.271;DP=480;FS=20.931;HRun=0;HaplotypeScore=98.1574;InbreedingCoeff=0.8644;MQ=67.99;MQ0=10;MQRankSum=-2.962;QD=8.73;ReadPosRankSum=-0.380;VQSLOD=1.7849;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:17:32.84:252,33,0	1/1:5,0:4:5.99:50,6,0	0/0:30,0:19:47.94:0,48,377	0/0:28,0:16:44.74:0,45,428	./.	0/0:12,0:12:12.01:0,12,133	0/0:18,0:18:24.03:0,24,280	1/1:24,0:21:53.53:454,54,0	1/1:10,0:9:17.91:140,18,0	0/0:16,0:15:33.06:0,33,362	0/0:12,0:12:23.71:0,24,185	0/0:18,0:18:47.93:0,48,464	0/0:17,0:16:15.43:0,15,409	0/0:14,0:14:0:0,0,0	1/1:16,0:16:6:54,6,0	1/1:8,0:8:10.89:92,11,0	1/1:15,0:14:8.52:79,9,0	1/1:11,0:11:3:26,3,0	1/1:16,0:15:41.64:314,42,0	1/1:5,25:29:6:51,6,0	1/1:11,0:10:17.85:132,18,0	0/0:20,0:20:17.93:0,18,315	0/0:19,0:19:41.73:0,42,421	0/0:25,0:25:51:0,51,626	1/1:18,0:18:5.88:36,6,0	0/0:25,0:24:50.99:0,51,543	1/1:17,0:16:37.88:257,38,0	0/0:9,0:9:26.98:0,27,261
chr10	54181651	.	AT	A	12563.70	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=7.309;DP=579;FS=9.652;HRun=6;HaplotypeScore=58.4091;InbreedingCoeff=0.9960;MQ=72.32;MQ0=0;MQRankSum=-1.333;QD=27.14;ReadPosRankSum=0.830;VQSLOD=4.9595;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,26:28:75.19:806,75,0	1/1:1,8:8:18.04:193,18,0	0/0:17,0:17:18.09:0,18,325	0/0:8,0:8:20.21:0,20,270	1/1:2,32:34:90.22:965,90,0	1/1:0,18:18:45.11:484,45,0	1/1:1,15:16:36.09:387,36,0	1/1:5,31:36:93.13:982,93,0	1/1:2,15:17:42.10:451,42,0	1/1:1,20:20:57.14:612,57,0	1/1:0,21:21:60.15:644,60,0	0/0:15,0:15:42.14:0,42,552	0/0:15,0:15:42.14:0,42,550	1/1:0,23:23:57.14:613,57,0	1/1:0,17:17:45.11:484,45,0	1/1:0,16:16:48.12:516,48,0	1/1:3,26:29:69.16:734,69,0	1/1:1,18:19:45.11:484,45,0	1/1:1,23:24:69.17:736,69,0	1/1:4,26:30:69.17:741,69,0	1/1:0,10:10:30.08:322,30,0	0/0:18,0:18:54.13:0,54,671	0/0:24,0:24:57.19:0,57,749	0/0:19,0:19:54.18:0,54,710	1/1:1,21:22:60.15:645,60,0	1/1:4,25:29:75.17:797,75,0	1/1:3,19:22:38.79:418,39,0	1/1:3,19:22:51.13:548,51,0
chr10	54182227	.	C	CA	5390.50	PASS	AB=1.000;AC=34;AF=0.607;AN=56;BaseQRankSum=-1.472;DP=606;FS=6.000;HRun=2;HaplotypeScore=90.4387;InbreedingCoeff=0.4320;MQ=76.89;MQ0=0;MQRankSum=-1.879;QD=11.93;ReadPosRankSum=-4.218;VQSLOD=1.7542;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:40,0:40:26.08:26,0,27	1/1:12,0:12:6.68:52,7,0	0/0:19,0:19:54:0,54,537	0/0:11,0:11:24.88:0,25,273	0/1:22,0:22:5.01:44,0,5	1/1:0,20:19:48.16:688,48,0	1/1:5,18:23:63.12:852,63,0	1/1:24,0:24:27.21:158,27,0	1/1:16,0:16:3.84:46,4,0	1/1:1,18:19:54.17:753,54,0	1/1:0,15:15:41.93:527,42,0	0/0:35,0:35:99:0,99,1185	0/0:29,0:29:78.21:0,78,937	1/1:19,0:19:0.21:45,0,0	0/1:28,0:28:11.29:11,0,21	1/1:20,0:20:3.31:28,3,0	1/1:28,0:28:5.91:68,6,0	0/1:19,0:19:9.10:9,0,19	1/1:20,0:20:4.23:58,4,0	1/1:22,0:22:5.10:87,5,0	0/1:26,0:26:12.77:59,0,13	0/0:9,0:9:24.07:0,24,295	0/0:17,0:17:48.12:0,48,566	0/0:17,0:17:51.01:0,51,556	0/0:17,0:17:3.20:0,3,22	1/1:2,32:34:99:1292,99,0	0/1:26,0:25:10.12:29,0,10	1/1:0,19:19:39.13:559,39,0
chr10	54182931	.	GAAGA	G	4601.24	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=6.550;DP=728;FS=3.133;HRun=0;HaplotypeScore=164.8038;InbreedingCoeff=0.9993;MQ=89.49;MQ0=0;MQRankSum=-9.287;QD=50.01;ReadPosRankSum=0.953;VQSLOD=5.7749;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,120,2983	0/0:13,0:13:39.13:0,39,1040	0/0:35,0:35:80.46:0,80,2146	0/0:31,0:31:71.69:0,72,1735	0/0:23,0:23:63.20:0,63,1583	1/1:2,14:16:42.14:782,42,0	1/1:0,9:9:24.08:447,24,0	0/0:40,0:40:99:0,99,2606	0/0:24,0:24:69.24:0,69,1759	1/1:4,19:23:60.20:1115,60,0	1/1:1,13:14:34.34:585,34,0	0/0:23,0:23:66.23:0,66,1760	0/0:28,0:28:78.27:0,78,2037	0/0:34,0:34:90.24:0,90,2278	0/0:35,0:35:90.31:0,90,2357	0/0:35,0:35:99:0,99,2536	0/0:19,0:19:54.19:0,54,1439	0/0:20,0:20:60.15:0,60,1539	0/0:35,0:35:99:0,105,2703	0/0:28,0:28:84.27:0,84,2127	0/0:24,0:24:60.21:0,60,1593	0/0:28,0:28:78.27:0,78,2079	0/0:18,0:18:51.14:0,51,1298	0/0:33,0:33:93.32:0,93,2480	0/0:29,0:29:72.25:0,72,1916	1/1:1,20:21:63.22:1170,63,0	0/0:34,0:34:96.33:0,96,2356	1/1:0,9:9:27.09:502,27,0
chr10	54182972	.	AG	A	20275.74	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=13.236;DP=692;FS=12.628;HRun=1;HaplotypeScore=105.3817;InbreedingCoeff=0.9987;MQ=70.47;MQ0=0;MQRankSum=-3.721;QD=38.26;ReadPosRankSum=1.066;VQSLOD=3.7182;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,46:46:99:1778,129,0	1/1:0,14:14:39.13:544,39,0	0/0:9,0:9:20.11:0,20,251	0/0:15,0:15:25.17:0,25,329	1/1:4,15:19:57.11:737,57,0	1/1:4,13:17:51.05:650,51,0	1/1:1,11:12:36.12:502,36,0	1/1:0,35:35:99:1433,105,0	1/1:3,19:22:66.19:873,66,0	1/1:1,23:24:72.23:985,72,0	1/1:2,20:22:62.77:780,63,0	0/0:26,0:26:78.27:0,78,1245	0/0:32,0:32:96.30:0,96,1479	1/1:0,34:34:93.24:1271,93,0	1/1:0,32:32:87.25:1192,87,0	1/1:3,28:31:93.25:1259,93,0	1/1:1,23:24:66.20:902,66,0	1/1:0,22:22:57.16:775,57,0	1/1:0,20:20:60.14:769,60,0	1/1:0,32:32:93.07:1221,93,0	1/1:0,30:30:78.22:1068,78,0	0/0:28,0:28:81.25:0,81,1258	0/0:19,0:19:57.19:0,57,909	0/0:33,0:33:99:0,99,1554	1/1:0,22:22:54.18:752,54,0	1/1:0,24:24:72.23:986,72,0	1/1:0,34:34:87.29:1215,87,0	1/1:0,14:14:42.14:585,42,0
chr10	54183065	.	C	CCT	6818.49	PASS	AB=0.691;AC=21;AF=0.375;AN=56;BaseQRankSum=10.421;DP=706;FS=0.951;HRun=0;HaplotypeScore=167.7794;InbreedingCoeff=-0.6001;MQ=73.51;MQ0=2;MQRankSum=-13.638;QD=12.37;ReadPosRankSum=1.811;VQSLOD=4.8271;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:22,14:50:99:918,0,466	0/1:7,2:10:99:154,0,125	0/0:26,0:26:66.18:0,66,927	0/0:35,0:33:90.22:0,90,1278	0/1:14,0:39:99:418,0,492	0/1:14,0:28:99:152,0,446	0/1:14,0:24:99:100,0,375	0/1:24,1:33:98.73:99,0,962	0/1:8,1:22:99:154,0,220	0/1:14,4:27:99:424,0,322	0/1:12,3:26:99:512,0,136	0/0:10,0:10:30.10:0,30,442	0/0:25,0:25:69.21:0,69,977	0/1:19,2:33:99:564,0,307	0/1:15,6:33:99:500,0,436	0/1:13,0:39:99:268,0,445	0/1:12,2:20:99:215,0,264	0/1:7,5:16:89.91:279,0,90	0/1:19,3:24:99:200,0,608	0/1:10,3:23:99:325,0,289	0/1:13,0:14:99:164,0,220	0/0:14,0:14:39.13:0,39,574	0/0:19,0:19:51.16:0,51,731	0/0:26,0:26:75.24:0,75,1086	0/1:7,1:14:99:148,0,150	0/1:16,4:26:99:404,0,413	0/1:13,6:34:99:677,0,176	0/1:8,0:14:99:144,0,226
chr10	54183174	.	C	CTTT	3617.36	PASS	AB=0.651;AC=30;AF=0.536;AN=56;BaseQRankSum=-1.969;DP=598;FS=1.018;HRun=14;HaplotypeScore=115.9104;InbreedingCoeff=0.4896;MQ=73.89;MQ0=2;MQRankSum=-0.826;QD=9.20;ReadPosRankSum=-3.583;VQSLOD=0.0702;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:46:99:0,108,635	0/0:5,0:12:26.36:0,26,183	0/0:19,0:16:4.55:0,5,51	0/0:17,0:14:17.74:0,18,147	1/1:9,12:32:65.93:687,66,0	0/1:24,0:39:31.56:106,0,32	1/1:8,0:17:4.98:11,5,0	1/1:15,11:30:41.15:488,41,0	1/1:6,11:25:25.31:359,25,0	0/1:8,0:22:8.72:84,0,9	1/1:6,0:16:12.23:73,12,0	0/0:10,0:10:16.22:0,16,179	0/0:17,0:18:26.30:0,26,262	1/1:11,2:14:25.12:304,25,0	1/1:6,17:30:40.62:551,41,0	0/0:2,0:20:18.21:0,18,204	1/1:4,13:20:6.02:105,6,0	1/1:2,12:15:15.05:261,15,0	0/1:7,0:17:16.10:27,0,16	1/1:2,0:16:14.69:74,15,0	1/1:6,0:11:0.65:23,1,0	0/0:18,0:19:35.65:0,36,357	0/0:17,0:17:12.77:0,13,150	0/0:22,0:23:38.78:0,39,415	1/1:5,6:15:21.05:278,21,0	0/1:6,0:23:18.71:41,0,19	0/1:14,0:30:24.04:93,0,24	0/1:12,0:21:9.38:50,0,9
chr10	54183435	.	CGTGTGTGTGTGTGTGTGTGTGT	C	1038.13	PASS	AB=0.767;AC=9;AF=0.173;AN=52;BaseQRankSum=4.323;DP=547;FS=9.393;HRun=0;HaplotypeScore=278.6612;InbreedingCoeff=0.5238;MQ=77.63;MQ0=14;MQRankSum=-2.993;QD=12.07;ReadPosRankSum=-0.327;VQSLOD=0.6727;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:30:33.11:0,33,2534	1/1:1,0:1:3.01:73,3,0	0/0:24,0:19:6.02:0,6,161	0/0:41,0:33:6.02:0,6,110	0/0:8,0:13:6.02:0,6,272	1/1:21,6:26:8.72:459,9,0	0/1:16,7:23:99:332,0,115	0/0:28,0:25:27.09:0,27,982	0/0:10,0:13:24.08:0,24,988	./.	1/1:10,4:14:3.01:127,3,0	0/0:19,0:19:19.31:0,19,1053	0/0:10,0:10:18.06:0,18,906	0/0:19,0:26:33.11:0,33,1238	0/0:21,0:25:18.06:0,18,713	0/0:17,0:17:18.95:0,19,1428	0/0:30,0:34:56.56:0,57,2715	0/0:17,0:20:15.03:0,15,671	0/0:15,0:15:25.57:0,26,1541	0/0:10,0:10:9.03:0,9,469	0/0:32,0:32:39.06:0,39,2431	0/0:13,0:13:6.02:0,6,477	0/0:8,0:8:3.01:0,3,94	0/0:30,0:28:45.15:0,45,3134	0/0:8,0:9:3.01:0,3,167	1/1:16,4:18:4.25:177,4,0	0/0:18,0:18:30.07:0,30,1446	./.
chr10	54186228	.	CTCTTTCTTTCTT	C	2604.74	PASS	AB=1.000;AC=10;AF=0.179;AN=56;BaseQRankSum=1.733;DP=544;FS=3.875;HRun=0;HaplotypeScore=212.2796;InbreedingCoeff=0.6308;MQ=65.54;MQ0=9;MQRankSum=-3.048;QD=23.47;ReadPosRankSum=4.281;VQSLOD=2.2695;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:18:11.40:0,11,93	0/0:10,0:10:4.35:0,4,100	0/0:20,0:15:32.24:0,32,625	0/0:16,0:12:23.40:0,23,256	0/0:26,0:25:25.01:0,25,263	0/0:20,0:20:15.74:0,16,187	0/0:14,0:13:4.80:0,5,31	0/0:32,0:30:19.77:0,20,216	0/0:15,0:14:5.48:0,5,84	0/0:21,0:20:27.51:0,28,239	0/1:14,0:13:28.07:28,0,33	0/0:17,0:16:42.07:0,42,627	0/0:15,0:14:36:0,36,529	0/0:17,0:16:7.25:0,7,55	0/0:28,0:28:14.14:0,14,143	0/0:20,0:20:16.31:0,16,174	0/1:27,0:24:67:67,0,85	0/0:19,0:19:8.07:0,8,23	1/1:11,14:23:18.38:772,18,0	1/1:17,0:17:51.09:767,51,0	1/1:10,0:10:30.01:410,30,0	0/0:21,0:21:63.18:0,63,1423	0/0:20,0:20:54.11:0,54,1042	0/0:25,0:24:52.57:0,53,1125	0/0:14,0:14:15.48:0,15,164	0/0:23,0:23:11.26:0,11,126	1/1:18,0:18:54.07:726,54,0	0/0:21,0:21:17.32:0,17,216
chr10	54186311	.	TTC	T	929.25	PASS	AB=0.933;AC=23;AF=0.479;AN=48;BaseQRankSum=7.425;DP=407;FS=9.339;HRun=0;HaplotypeScore=84.4671;InbreedingCoeff=0.2554;MQ=28.63;MQ0=106;MQRankSum=-5.049;QD=4.36;ReadPosRankSum=2.203;VQSLOD=1.5116;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:22,3:12:0.22:0,0,1	0/1:4,0:2:10.77:20,0,11	./.	./.	1/1:13,3:12:6.94:100,7,0	0/1:11,2:9:20.50:29,0,21	0/0:10,0:2:1.25:0,1,3	0/0:20,0:5:0.76:0,1,45	0/1:25,1:16:16.22:40,0,16	1/1:2,1:1:3.01:41,3,0	0/0:3,0:3:7.21:0,7,55	0/0:25,0:22:39.13:0,39,635	0/0:26,0:18:39.13:0,39,690	1/1:8,9:6:6.02:94,6,0	1/1:7,3:5:1.18:40,1,0	0/1:6,0:3:7.03:7,0,29	0/0:25,0:9:5.14:0,5,63	1/1:17,3:7:6.02:78,6,0	./.	1/1:3,1:1:3.01:39,3,0	./.	0/0:20,0:16:32.68:0,33,333	0/0:20,0:14:26.64:0,27,236	0/0:35,0:25:50.68:0,51,549	1/1:9,7:13:11.98:148,12,0	1/1:4,4:7:14.89:198,15,0	0/1:12,0:2:8.65:9,0,37	0/1:23,7:15:25.40:241,0,25
chr10	54186315	.	TTC	T	388.50	PASS	AB=0.940;AC=15;AF=0.313;AN=48;BaseQRankSum=7.257;DP=419;FS=12.527;HRun=0;HaplotypeScore=94.0824;InbreedingCoeff=0.0643;MQ=29.41;MQ0=100;MQRankSum=-3.614;QD=2.13;ReadPosRankSum=2.604;VQSLOD=1.1349;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:12:0.18:16,0,0	0/0:4,0:2:3:0,3,25	./.	./.	0/1:20,0:16:19.36:19,0,58	0/1:12,2:10:14:14,0,65	0/0:8,0:2:3.01:0,3,35	0/0:20,0:6:15.49:0,15,185	0/0:26,0:16:20.65:0,21,285	1/1:2,1:1:3.01:41,3,0	0/0:3,0:3:6.02:0,6,88	0/0:25,0:22:39.12:0,39,646	0/0:25,0:17:36.12:0,36,661	0/1:19,0:8:10.78:43,0,11	0/0:14,0:9:4.92:0,5,59	0/1:7,0:3:6.62:7,0,33	0/0:26,0:10:9.03:0,9,128	1/1:21,0:7:5.23:42,5,0	./.	1/1:4,0:1:3.01:37,3,0	./.	0/0:22,0:18:38.78:0,39,416	0/0:21,0:16:32.64:0,33,285	0/0:35,0:25:44.67:0,45,479	0/1:19,0:15:4.81:19,0,5	0/1:5,3:7:45.19:123,0,45	0/1:12,0:2:5.80:6,0,38	0/1:25,5:15:68.12:163,0,68
chr10	54186319	.	TTC	T	211.23	PASS	AB=0.922;AC=9;AF=0.188;AN=48;BaseQRankSum=6.367;DP=421;FS=3.739;HRun=0;HaplotypeScore=95.5615;InbreedingCoeff=0.0713;MQ=29.64;MQ0=100;MQRankSum=-2.597;QD=2.51;ReadPosRankSum=4.079;VQSLOD=1.0637;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:12:8.37:0,8,170	0/0:3,0:1:3.01:0,3,39	./.	./.	0/0:21,0:17:19.25:0,19,199	0/1:13,0:9:11.90:12,0,119	0/0:9,0:3:3.48:0,3,37	0/0:19,0:6:15.52:0,16,224	0/0:26,0:16:20.94:0,21,334	1/1:2,1:1:3.01:42,3,0	0/0:3,0:3:6.02:0,6,108	0/0:23,0:20:33.10:0,33,548	0/0:25,0:17:35.95:0,36,640	0/1:19,0:8:6.84:7,0,106	0/0:17,0:12:36.11:0,36,466	0/1:7,0:3:6.59:7,0,33	0/0:28,0:12:15.05:0,15,231	0/0:21,0:7:6:0,6,56	./.	1/1:4,0:1:0.89:2,1,0	./.	0/0:23,0:19:41.79:0,42,453	0/0:21,0:16:32.64:0,33,282	0/0:35,0:25:47.44:0,47,477	0/0:18,0:14:20.95:0,21,228	0/1:5,3:7:64.99:108,0,65	0/0:12,0:2:5.99:0,6,66	0/1:26,4:15:99:149,0,147
chr10	54186337	.	CCTTTCTTT	C	5045.23	PASS	AB=0.937;AC=28;AF=0.519;AN=54;BaseQRankSum=4.896;DP=438;FS=20.524;HRun=0;HaplotypeScore=111.6746;InbreedingCoeff=0.4173;MQ=38.10;MQ0=82;MQRankSum=-5.443;QD=15.67;ReadPosRankSum=-2.110;VQSLOD=2.2074;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:14:16.90:209,17,0	0/0:2,0:1:3.01:0,3,40	0/0:4,0:2:5.38:0,5,75	0/0:4,0:3:8.86:0,9,139	1/1:23,0:21:36.11:490,36,0	1/1:18,2:17:11.84:542,12,0	1/1:18,0:14:5.12:403,5,0	1/1:18,0:8:21.07:280,21,0	1/1:26,0:18:16.59:180,17,0	1/1:7,1:7:21.07:350,21,0	0/1:4,0:4:27.86:41,0,28	0/0:19,0:17:25.32:0,25,594	0/0:24,0:20:48.06:0,48,1235	1/1:20,0:11:26.91:344,27,0	1/1:23,0:19:53.66:604,54,0	0/1:5,0:3:35.73:68,0,36	0/1:26,0:14:6.81:266,0,7	1/1:17,0:7:6.02:83,6,0	0/0:4,0:1:2.99:0,3,23	0/0:5,0:2:1.90:0,2,6	./.	0/0:24,0:20:42.02:0,42,689	0/0:18,0:14:32.89:0,33,493	0/1:36,0:27:28.02:28,0,753	1/1:11,0:9:20.95:225,21,0	0/1:6,3:8:3.47:345,0,3	0/0:10,0:1:1.82:0,2,5	0/1:29,5:19:52.40:588,0,52
chr10	54186418	.	G	GTCTCTCGT	9456.81	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-0.483;DP=511;FS=15.234;HRun=0;HaplotypeScore=180.9496;InbreedingCoeff=0.9790;MQ=67.58;MQ0=5;MQRankSum=-9.672;QD=53.73;ReadPosRankSum=-1.816;VQSLOD=3.0961;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:12,12:23:27.56:1055,28,0	0/0:7,0:7:12.04:0,12,324	0/0:40,0:33:65.89:0,66,1453	0/0:33,0:26:42.01:0,42,1005	1/1:11,6:16:18.52:476,19,0	0/0:16,0:16:36.11:0,36,874	0/0:21,0:21:48.64:0,49,1187	1/1:6,9:18:39.13:953,39,0	1/1:5,16:22:42.14:1788,42,0	0/0:12,0:12:30.10:0,30,796	0/0:12,0:12:29.95:0,30,677	0/0:14,0:14:36.11:0,36,923	0/0:16,0:16:42.14:0,42,1052	1/1:11,8:19:33.11:1152,33,0	1/1:6,19:26:36.12:1442,36,0	0/0:22,0:22:54.19:0,54,1432	1/1:10,16:26:30.10:1189,30,0	1/1:3,1:4:9.01:175,9,0	0/0:9,0:9:18.06:0,18,409	0/0:19,0:19:51.09:0,51,1372	0/0:9,0:9:18.04:0,18,402	0/0:21,0:21:51.16:0,51,1301	0/0:15,0:15:33.10:0,33,818	0/0:40,0:40:99:0,102,2609	1/1:9,11:20:30.10:1227,30,0	0/0:10,0:10:27.09:0,27,698	0/0:12,0:12:30.10:0,30,791	0/0:5,0:5:15.03:0,15,298
chr10	54186438	.	T	TACAC	1235.92	PASS	AB=0.914;AC=25;AF=0.521;AN=48;BaseQRankSum=2.480;DP=508;FS=0.760;HRun=0;HaplotypeScore=176.7749;InbreedingCoeff=0.3504;MQ=56.75;MQ0=9;MQRankSum=-1.011;QD=4.45;ReadPosRankSum=-2.064;VQSLOD=2.3843;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:28:13.92:94,14,0	0/0:8,0:8:1:0,1,21	./.	./.	0/0:10,0:11:3:0,3,28	1/1:10,0:17:3.01:52,3,0	1/1:23,0:22:12.04:181,12,0	./.	1/1:21,0:22:5.49:24,5,0	1/1:15,0:15:17.18:229,17,0	0/0:9,1:14:0.44:0,0,1	0/1:15,0:16:3.11:3,0,237	0/0:11,0:14:8.75:0,9,102	0/0:21,0:21:1.26:0,1,65	0/1:20,0:23:22.14:22,0,78	0/0:20,0:20:12.49:0,12,143	0/1:26,0:27:27.58:28,0,100	0/1:7,0:10:16.23:16,0,160	./.	1/1:24,0:24:6.01:73,6,0	1/1:18,0:16:9:87,9,0	0/0:17,0:17:12.04:0,12,163	0/0:14,0:14:12.02:0,12,145	0/0:37,0:39:6.67:0,7,547	0/1:18,0:20:6.50:6,0,40	1/1:15,0:15:25.89:347,26,0	1/1:8,0:11:6.02:104,6,0	1/1:2,0:5:9.03:129,9,0
chr10	54186799	.	T	TTTTG	8958.12	PASS	AB=1.000;AC=40;AF=0.714;AN=56;BaseQRankSum=-0.628;DP=746;FS=1.235;HRun=0;HaplotypeScore=134.4460;InbreedingCoeff=0.8539;MQ=66.21;MQ0=9;MQRankSum=-0.388;QD=16.35;ReadPosRankSum=6.715;VQSLOD=4.2912;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:32,0:32:25.52:471,26,0	1/1:9,0:9:20.54:242,21,0	0/0:39,0:20:13.30:0,13,297	0/0:36,0:14:20.69:0,21,168	1/1:27,3:30:65.43:780,65,0	1/1:27,1:28:23.52:488,24,0	1/1:27,0:27:36.77:400,37,0	1/1:27,0:27:5.99:307,6,0	1/1:19,1:20:36:445,36,0	1/1:28,1:29:49.73:655,50,0	1/1:25,1:26:35.48:532,35,0	0/0:25,0:25:63.75:0,64,759	0/0:19,0:19:45.11:0,45,618	1/1:26,1:27:35.11:408,35,0	1/1:45,1:45:80.65:1006,81,0	1/1:24,0:24:36:399,36,0	1/1:28,0:28:38.38:494,38,0	1/1:26,1:26:39.34:629,39,0	1/1:29,0:27:24:284,24,0	0/1:22,0:22:4.15:4,0,85	0/1:22,0:22:0.05:0,0,9	0/0:29,0:29:80.23:0,80,886	0/0:15,0:15:26.52:0,27,274	0/0:35,0:35:69.91:0,70,1115	1/1:17,0:17:23.60:241,24,0	1/1:34,1:35:81.21:913,81,0	1/1:30,0:30:2.99:5,3,0	1/1:12,0:11:21.40:253,21,0
chr10	54186800	.	T	TTTG	12809.19	PASS	AB=1.000;AC=42;AF=0.750;AN=56;BaseQRankSum=-6.341;DP=756;FS=0.000;HRun=0;HaplotypeScore=109.4330;InbreedingCoeff=0.8491;MQ=66.18;MQ0=9;MQRankSum=-0.052;QD=21.49;ReadPosRankSum=7.493;VQSLOD=4.3308;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,24:33:30.72:765,31,0	1/1:0,9:9:21.05:363,21,0	0/1:39,0:20:0.74:1,0,282	0/0:36,0:14:25.89:0,26,215	1/1:5,24:30:65.99:1056,66,0	1/1:12,16:30:43.08:711,43,0	1/1:8,19:27:36.45:577,36,0	1/1:9,14:26:12.55:434,13,0	1/1:3,17:21:36.07:629,36,0	1/1:6,23:31:68.67:776,69,0	1/1:6,22:28:32.86:684,33,0	0/0:25,0:25:66.90:0,67,794	0/0:19,0:19:45.11:0,45,611	1/1:5,20:27:35.86:591,36,0	1/1:10,33:47:76.08:1344,76,0	1/1:3,17:23:38.14:637,38,0	1/1:6,21:28:38.41:746,38,0	1/1:8,20:27:34.90:878,35,0	1/1:28,0:26:45.88:350,46,0	0/1:22,0:22:40.87:41,0,45	1/1:22,0:22:20.35:75,20,0	0/0:28,0:28:81.09:0,81,929	0/0:15,0:15:29.02:0,29,286	0/0:37,0:37:94.32:0,94,1149	1/1:3,13:16:23.97:390,24,0	1/1:9,26:38:87.08:1221,87,0	1/1:29,0:29:37.41:111,37,0	1/1:5,7:11:29.85:429,30,0
chr10	54186801	.	T	TTG	7797.44	PASS	AB=0.961;AC=38;AF=0.679;AN=56;BaseQRankSum=1.865;DP=750;FS=7.069;HRun=0;HaplotypeScore=114.9212;InbreedingCoeff=0.7032;MQ=66.15;MQ0=9;MQRankSum=0.285;QD=14.10;ReadPosRankSum=8.068;VQSLOD=3.6851;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:31,1:32:0.19:353,0,0	1/1:9,0:9:19.57:174,20,0	0/0:38,0:20:20.75:0,21,335	0/0:36,0:14:25.46:0,25,224	1/1:28,1:29:64.40:589,64,0	1/1:28,3:31:6.73:411,7,0	1/1:24,3:27:32.34:402,32,0	0/1:24,1:25:17.17:281,0,17	1/1:20,1:21:36.01:345,36,0	0/1:28,3:31:6.13:559,0,6	1/1:28,0:27:23.62:377,24,0	0/0:25,0:25:66.69:0,67,750	0/0:18,0:18:45.10:0,45,560	1/1:27,0:27:35.90:311,36,0	1/1:45,2:46:39.39:717,39,0	1/1:21,1:22:38.71:343,39,0	1/1:26,2:28:13.12:405,13,0	1/1:27,1:27:36.83:467,37,0	1/1:28,0:26:60.44:425,60,0	0/1:21,0:21:15.20:92,0,15	1/1:22,0:22:33.07:157,33,0	0/0:28,0:28:81.02:0,81,875	0/0:15,0:15:31.83:0,32,303	0/0:37,0:37:99:0,102,1149	1/1:15,0:15:23.37:208,23,0	1/1:39,1:40:50.31:723,50,0	1/1:29,0:29:49.47:218,49,0	1/1:11,2:12:12.38:240,12,0
chr10	54186802	.	T	TG	5137.84	PASS	AB=0.998;AC=32;AF=0.571;AN=56;BaseQRankSum=3.034;DP=745;FS=23.549;HRun=0;HaplotypeScore=110.7777;InbreedingCoeff=0.2706;MQ=66.86;MQ0=9;MQRankSum=-0.522;QD=9.38;ReadPosRankSum=9.555;VQSLOD=2.6962;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:33:33:132,0,33	1/1:9,0:9:14.51:78,15,0	0/0:38,0:20:9.44:0,9,300	0/0:37,0:15:25.15:0,25,217	1/1:27,0:27:53.65:283,54,0	0/1:30,0:30:45.74:128,0,46	1/1:27,0:27:10.86:143,11,0	0/1:25,0:25:63.24:139,0,63	1/1:20,0:20:33.51:157,34,0	0/1:31,0:31:54.32:312,0,54	0/1:26,0:25:17.08:213,0,17	0/0:25,0:25:66.85:0,67,693	0/0:19,0:19:45.08:0,45,516	1/1:25,2:27:28.79:123,29,0	0/1:45,1:45:5.78:277,0,6	1/1:22,0:22:35.02:180,35,0	0/1:27,0:27:10.97:142,0,11	0/1:27,0:26:24.32:163,0,24	1/1:4,26:28:71.89:700,72,0	1/1:4,17:23:14.36:366,14,0	1/1:2,21:23:42.01:482,42,0	0/0:28,0:28:78.20:0,78,795	0/0:15,0:15:31.83:0,32,296	0/0:35,0:35:98.93:0,99,1068	1/1:14,0:14:14.61:78,15,0	0/1:38,0:38:70.03:332,0,70	1/1:0,30:30:54.16:635,54,0	0/1:13,0:12:25.25:75,0,25
chr10	54188123	.	T	TA	184.32	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-1.076;DP=486;FS=0.000;HRun=0;HaplotypeScore=81.6116;InbreedingCoeff=0.9313;MQ=75.80;MQ0=1;MQRankSum=-1.107;QD=13.17;ReadPosRankSum=-2.333;VQSLOD=3.9636;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,113,726	1/1:0,3:3:6.02:75,6,0	0/0:17,0:16:48.03:0,48,587	0/0:20,0:19:45.54:0,46,554	0/0:14,0:14:41.19:0,41,252	0/0:18,0:18:51.10:0,51,304	0/0:21,0:21:49.45:0,49,286	0/0:31,0:31:83.88:0,84,446	0/0:15,0:15:37.99:0,38,232	0/0:17,0:17:39.86:0,40,219	0/0:11,0:11:22.77:0,23,138	0/0:9,0:9:27.09:0,27,377	0/0:24,0:24:69.18:0,69,926	0/0:23,0:23:52.44:0,52,310	0/0:17,0:17:46.84:0,47,284	1/1:2,9:11:18.53:219,19,0	0/0:29,0:29:84.90:0,85,510	0/0:12,0:12:26.96:0,27,167	0/0:23,0:23:55.40:0,55,294	0/0:14,0:14:41.42:0,41,281	0/0:27,0:27:65.87:0,66,432	0/0:6,0:6:18.04:0,18,233	0/0:9,0:9:23.93:0,24,335	0/0:20,0:20:60.20:0,60,838	0/0:14,0:14:38.11:0,38,230	0/0:13,0:13:37.59:0,38,205	0/0:14,0:14:30.83:0,31,193	0/0:14,0:14:41.28:0,41,258
chr10	54188287	.	C	CT	12567.44	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=-11.077;DP=484;FS=8.277;HRun=6;HaplotypeScore=43.7697;InbreedingCoeff=0.9879;MQ=74.81;MQ0=0;MQRankSum=-4.129;QD=32.39;ReadPosRankSum=1.669;VQSLOD=4.8275;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,20:22:60.19:754,60,0	1/1:2,9:11:27.09:337,27,0	0/0:13,0:13:33.06:0,33,331	0/0:13,0:13:30.07:0,30,306	1/1:1,17:18:51.16:638,51,0	1/1:1,16:17:45.14:565,45,0	1/1:0,14:14:36.11:449,36,0	1/1:4,27:31:81.21:974,81,0	1/1:0,10:10:24.08:301,24,0	1/1:5,18:23:60.19:753,60,0	1/1:1,15:16:45.06:529,45,0	0/0:11,0:11:26.65:0,27,255	0/0:23,0:23:66.12:0,66,665	1/1:3,17:20:48.15:603,48,0	1/1:3,15:18:42.13:528,42,0	1/1:2,15:17:42.13:528,42,0	1/1:1,34:35:93.30:1168,93,0	1/1:1,22:23:63.20:792,63,0	1/1:3,22:25:66.18:806,66,0	1/1:2,14:16:39.12:490,39,0	1/1:3,3:6:9.03:113,9,0	0/0:12,0:12:36.07:0,36,360	0/0:10,0:10:27.06:0,27,275	0/0:14,0:14:39.09:0,39,398	1/1:1,8:9:24.08:302,24,0	1/1:1,19:20:54.17:676,54,0	1/1:1,20:21:57.18:710,57,0	1/1:0,16:16:45.12:551,45,0
chr10	54188404	.	CT	C	8368.08	PASS	AB=0.952;AC=43;AF=0.768;AN=56;BaseQRankSum=7.711;DP=484;FS=24.100;HRun=8;HaplotypeScore=59.5288;InbreedingCoeff=0.8875;MQ=64.77;MQ0=0;MQRankSum=0.091;QD=22.37;ReadPosRankSum=1.719;VQSLOD=3.3406;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,25:30:72.09:688,72,0	1/1:1,5:6:15.01:139,15,0	0/1:19,1:16:25.90:26,0,237	0/0:18,1:16:38.48:0,38,435	1/1:2,23:25:57.08:550,57,0	1/1:2,17:19:48.07:464,48,0	1/1:2,15:17:36.05:348,36,0	1/1:5,19:24:57.08:549,57,0	1/1:4,10:14:33.02:311,33,0	1/1:0,23:23:69.11:666,69,0	1/1:1,8:9:21.03:203,21,0	0/0:16,0:17:48:0,48,546	0/0:13,0:13:30.09:0,30,362	1/1:1,9:10:27.04:261,27,0	1/1:5,17:22:48.07:463,48,0	1/1:3,15:17:45.05:428,45,0	1/1:1,18:19:51.08:492,51,0	1/1:0,17:17:42.07:406,42,0	1/1:3,20:23:53.88:521,54,0	1/1:2,12:14:36.05:348,36,0	1/1:3,18:21:54.08:522,54,0	0/0:21,0:21:57.17:0,57,688	0/0:12,0:12:36.11:0,36,435	0/0:28,0:28:72.22:0,72,869	1/1:3,4:7:12.01:116,12,0	1/1:1,14:15:42.07:405,42,0	1/1:3,11:14:33.05:319,33,0	1/1:1,6:7:15.02:145,15,0
chr10	54188429	.	A	ATG	2053.31	PASS	AB=0.965;AC=33;AF=0.660;AN=50;BaseQRankSum=-0.191;DP=522;FS=0.000;HRun=0;HaplotypeScore=120.6598;InbreedingCoeff=0.4987;MQ=55.27;MQ0=6;MQRankSum=-0.370;QD=5.80;ReadPosRankSum=-2.907;VQSLOD=2.6482;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:28,1:29:46.22:155,0,46	0/0:5,0:7:5.68:0,6,28	./.	./.	1/1:26,1:27:9.01:110,9,0	1/1:16,0:16:12.01:134,12,0	1/1:15,0:17:8.95:72,9,0	1/1:23,0:23:3.63:14,4,0	0/1:12,1:13:13.46:77,0,13	1/1:29,0:28:18.03:196,18,0	1/1:13,0:13:11.40:137,11,0	0/0:13,0:13:2.97:0,3,32	0/0:13,0:13:11.83:0,12,99	1/1:11,0:11:2.84:24,3,0	1/1:22,2:24:12.04:170,12,0	0/0:12,0:16:13.75:0,14,68	1/1:20,3:23:18.94:223,19,0	1/1:20,0:20:5.97:61,6,0	1/1:23,0:22:8.95:71,9,0	./.	1/1:33,0:33:18.03:213,18,0	0/0:19,0:19:8.45:0,8,48	0/0:12,0:12:5.84:0,6,46	0/0:26,0:26:6.01:0,6,64	1/1:5,3:8:9.03:132,9,0	1/1:17,0:16:15.08:137,15,0	1/1:19,1:19:23.26:262,23,0	0/1:8,0:8:26.05:34,0,26
chr10	54189679	.	GT	G	2181.25	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=13.391;DP=623;FS=1.367;HRun=9;HaplotypeScore=72.5689;InbreedingCoeff=0.9534;MQ=72.70;MQ0=2;MQRankSum=-1.837;QD=20.97;ReadPosRankSum=1.040;VQSLOD=4.4401;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:69.20:0,69,793	1/1:1,12:13:30.01:274,30,0	0/0:34,0:28:47.63:0,48,471	0/0:25,0:21:25.44:0,25,268	0/0:34,1:35:68.80:0,69,1029	0/0:17,0:17:45.12:0,45,509	0/0:26,0:26:69.21:0,69,796	0/0:27,0:27:54.11:0,54,582	0/0:17,0:17:51.15:0,51,589	0/0:37,0:37:99:0,102,1148	0/0:30,0:30:81.21:0,81,908	0/0:14,0:14:33.10:0,33,381	0/0:18,0:18:48.13:0,48,543	0/0:21,0:22:59.93:0,60,626	0/0:21,0:21:63.18:0,63,717	1/1:2,13:15:1.40:267,1,0	0/0:18,0:18:54.16:0,54,621	0/0:31,0:30:87.10:0,87,934	1/1:2,22:24:34.41:565,34,0	1/1:2,17:19:47.98:431,48,0	1/1:1,10:11:27.01:247,27,0	0/0:25,1:27:53.13:0,53,820	0/0:18,0:18:48.14:0,48,554	0/0:17,0:17:45.09:0,45,488	0/0:15,0:15:45.13:0,45,519	0/0:31,0:31:87.26:0,87,1004	1/1:0,22:22:62.95:576,63,0	0/0:10,0:10:30.09:0,30,346
chr10	54190240	.	TACACACACAC	T	967.41	PASS	AB=0.944;AC=22;AF=0.407;AN=54;BaseQRankSum=1.688;DP=658;FS=3.040;HRun=0;HaplotypeScore=198.7123;InbreedingCoeff=0.3540;MQ=55.36;MQ0=18;MQRankSum=0.758;QD=3.26;ReadPosRankSum=0.569;VQSLOD=2.7187;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:27:1.82:60,2,0	1/1:15,0:16:6.02:75,6,0	0/0:31,0:19:3.01:0,3,42	./.	1/1:16,1:17:22.28:430,22,0	0/0:23,0:22:2.36:0,2,22	0/0:36,0:36:24.93:0,25,586	0/0:22,0:21:8.47:0,8,42	1/1:12,0:10:2.99:24,3,0	0/1:35,0:34:3.15:3,0,1275	0/0:16,0:16:9.03:0,9,280	0/0:15,0:15:9.50:0,10,288	0/0:29,0:29:38.67:0,39,739	1/1:19,0:20:4.42:27,4,0	1/1:29,1:33:4.54:29,5,0	0/1:12,0:15:18.23:24,0,18	0/1:27,1:28:38.95:132,0,39	0/1:23,0:22:11.18:11,0,191	0/1:21,0:18:66.92:67,0,118	0/1:18,0:20:0:0,0,0	0/0:46,0:44:1.41:0,1,4	0/0:25,0:24:18.04:0,18,402	0/0:16,0:14:14.12:0,14,316	0/0:35,0:35:27.09:0,27,692	1/1:12,2:14:3.01:89,3,0	0/0:34,0:33:63.20:0,63,1651	1/1:8,0:9:9.02:158,9,0	0/0:5,0:4:9.03:0,9,271
chr10	54190270	.	CACACACACACACACAG	C	1540.14	PASS	AB=1.000;AC=16;AF=0.286;AN=56;BaseQRankSum=6.806;DP=671;FS=6.640;HRun=0;HaplotypeScore=311.5156;InbreedingCoeff=0.1405;MQ=38.90;MQ0=30;MQRankSum=-3.170;QD=5.07;ReadPosRankSum=-6.430;VQSLOD=0.1804;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:31:17.54:0,18,264	1/1:15,0:14:2.19:166,2,0	0/0:11,0:2:6.02:0,6,119	0/0:16,0:1:0.89:0,1,2	0/1:26,0:24:91.93:92,0,150	0/1:26,0:25:31.10:31,0,96	0/0:33,0:32:45.17:0,45,1157	0/0:21,0:20:41.57:0,42,333	0/0:18,0:16:13.30:0,13,327	0/1:37,0:34:24.41:24,0,2345	0/0:11,0:11:11.85:0,12,497	0/0:20,0:19:33.39:0,33,912	0/0:27,0:27:42.34:0,42,1925	0/1:20,0:20:12.01:12,0,71	0/0:29,0:28:9.89:0,10,195	0/1:21,0:19:32.38:82,0,32	0/1:25,0:25:99:147,0,200	0/0:21,0:20:34.44:0,34,522	0/1:17,0:15:99:247,0,201	1/1:14,13:24:3.42:33,3,0	1/1:50,0:45:17.52:136,18,0	0/0:28,0:26:42.03:0,42,1101	0/1:17,0:15:22.27:22,0,622	0/0:39,0:38:20.11:0,20,1722	0/0:16,0:15:2.62:0,3,120	0/0:37,0:35:41.60:0,42,2847	1/1:23,0:22:12.79:711,13,0	0/0:6,0:5:1:0,1,432
chr10	54190299	.	A	AC	60.11	PASS	AB=0.862;AC=10;AF=0.179;AN=56;BaseQRankSum=9.462;DP=720;FS=10.088;HRun=0;HaplotypeScore=245.5936;InbreedingCoeff=-0.0262;MQ=45.44;MQ0=21;MQRankSum=-7.139;QD=0.33;ReadPosRankSum=3.868;VQSLOD=0.6911;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:26.84:0,27,359	1/1:6,5:10:9.46:82,9,0	0/0:43,0:11:27.31:0,27,305	0/0:70,0:20:35.70:0,36,459	0/0:21,1:22:14.59:0,15,200	0/1:33,6:39:8.63:9,0,283	0/0:24,1:24:37.86:0,38,477	0/0:23,0:22:63.21:0,63,852	0/0:23,1:23:18.88:0,19,363	0/1:26,5:30:8.19:8,0,782	0/0:9,0:9:2.98:0,3,42	0/0:24,0:23:48.03:0,48,668	0/0:18,0:18:51.61:0,52,663	0/0:14,4:18:8.95:0,9,153	0/0:26,8:33:23.95:0,24,314	0/0:32,2:32:7.98:0,8,327	0/1:20,3:23:18.56:19,0,302	0/1:14,1:15:5.45:5,0,223	0/1:19,3:20:36.27:36,0,440	0/0:21,3:23:1.11:0,1,75	0/0:33,0:30:24.12:0,24,240	0/0:26,0:24:51.16:0,51,694	0/0:14,0:14:26.97:0,27,345	0/0:37,0:37:84.23:0,84,1107	0/1:16,2:17:10.51:11,0,96	0/0:27,4:30:3.21:0,3,746	0/1:12,7:18:15.92:16,0,165	0/1:4,1:4:11.44:11,0,74
chr10	54190303	.	AGAGAGAGT	A	1586.02	PASS	AB=0.924;AC=13;AF=0.232;AN=56;BaseQRankSum=12.349;DP=738;FS=32.000;HRun=0;HaplotypeScore=288.2918;InbreedingCoeff=-0.2211;MQ=47.27;MQ0=19;MQRankSum=-8.322;QD=5.38;ReadPosRankSum=-0.390;VQSLOD=1.1641;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:33.56:0,34,935	0/1:12,0:11:1.12:125,0,1	0/0:49,0:15:30.75:0,31,559	0/0:79,0:25:40.30:0,40,674	0/0:18,1:19:17.68:0,18,566	0/1:33,6:39:99:118,0,882	0/0:27,1:27:50.52:0,51,1090	0/0:24,0:23:65.68:0,66,1333	0/1:25,1:25:39.95:40,0,966	0/1:26,5:30:99:283,0,1129	0/0:9,0:9:6.88:0,7,146	0/0:24,0:23:53.48:0,53,1471	0/0:19,0:19:54.58:0,55,1501	0/0:14,4:18:18.17:0,18,384	0/0:26,8:33:36.84:0,37,943	0/1:35,0:33:25.18:25,0,382	0/1:20,3:24:99:328,0,633	0/1:13,1:14:60.77:61,0,482	0/1:21,0:20:99:137,0,559	0/1:24,0:23:0.55:1,0,128	0/0:33,0:30:24.63:0,25,542	0/0:24,0:23:51.62:0,52,1668	0/0:14,0:14:27.32:0,27,625	0/0:39,0:39:88.73:0,89,2381	0/1:16,2:17:64.14:64,0,260	0/1:26,4:29:99:243,0,1105	0/1:18,0:17:99:237,0,434	0/1:2,1:3:73.21:73,0,146
chr10	54190348	.	GAC	G	1621.26	PASS	AB=0.856;AC=12;AF=0.214;AN=56;BaseQRankSum=1.817;DP=997;FS=10.931;HRun=0;HaplotypeScore=336.6786;InbreedingCoeff=-0.2928;MQ=44.21;MQ0=17;MQRankSum=-1.161;QD=4.10;ReadPosRankSum=-3.009;VQSLOD=0.8557;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:51:38.02:0,38,409	0/1:14,5:19:15.38:15,0,223	0/0:46,0:13:26.23:0,26,310	0/0:76,0:28:27.16:0,27,476	0/0:25,0:25:15.34:0,15,332	0/1:37,11:49:99:271,0,644	0/1:21,16:39:92.03:92,0,434	0/0:55,0:55:0.23:0,0,1327	0/0:37,0:37:31:0,31,427	0/1:44,0:45:99:291,0,624	0/1:16,8:24:99:209,0,99	0/0:28,0:28:65.49:0,65,1103	0/0:26,0:26:73.71:0,74,1002	0/0:25,0:25:26.39:0,26,380	0/0:46,0:46:56.35:0,56,707	0/1:23,14:37:99:283,0,458	0/1:22,0:22:28.70:29,0,257	0/1:23,0:22:10.34:10,0,268	0/1:45,0:42:99:105,0,656	0/0:43,0:43:76.93:0,77,684	0/1:40,1:37:11.21:11,0,228	0/0:28,0:27:69.13:0,69,1095	0/0:21,0:21:26.60:0,27,664	0/0:43,0:43:99:0,102,1701	0/0:23,0:24:8.06:0,8,378	0/1:33,6:38:99:370,0,450	0/0:26,0:25:5.84:0,6,441	0/1:4,7:12:82.15:82,0,85
chr10	54190352	.	C	CAG	1716.11	PASS	AB=0.883;AC=16;AF=0.286;AN=56;BaseQRankSum=2.182;DP=1007;FS=22.457;HRun=0;HaplotypeScore=341.3136;InbreedingCoeff=-0.3826;MQ=44.00;MQ0=20;MQRankSum=1.432;QD=3.17;ReadPosRankSum=-0.236;VQSLOD=1.1510;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:25,24:53:99:300,0,298	0/1:19,0:19:1.32:1,0,242	0/0:39,0:11:29.58:0,30,323	0/0:69,1:24:26.09:0,26,492	0/1:18,9:28:11.67:12,0,310	0/0:48,0:48:25.34:0,25,761	0/0:39,0:39:18.45:0,18,450	0/1:36,0:55:99:122,0,1258	0/1:32,5:37:99:143,0,416	0/1:46,0:46:99:111,0,665	0/1:22,0:24:11.58:12,0,119	0/0:26,0:26:78.12:0,78,1083	0/0:26,0:26:74.24:0,74,1044	0/1:18,7:25:99:109,0,331	0/1:35,15:51:9.49:9,0,645	0/0:38,0:39:5.98:0,6,512	0/1:16,4:21:99:274,0,261	0/1:16,9:24:99:216,0,197	0/1:45,0:40:5.92:6,0,660	0/0:42,0:42:22.95:0,23,447	0/0:42,0:38:5.73:0,6,192	0/0:29,0:28:71.61:0,72,1046	0/0:21,0:21:48.13:0,48,669	0/0:44,0:44:99:0,105,1556	0/1:19,8:27:99:361,0,330	0/1:41,0:41:99:166,0,534	0/1:27,2:27:16.33:16,0,328	0/1:13,0:13:11.82:12,0,109
chr10	54190380	.	C	CGA	2529.86	PASS	AB=0.851;AC=18;AF=0.321;AN=56;BaseQRankSum=13.329;DP=865;FS=0.387;HRun=0;HaplotypeScore=218.6101;InbreedingCoeff=-0.4744;MQ=52.97;MQ0=10;MQRankSum=-13.580;QD=4.44;ReadPosRankSum=-9.291;VQSLOD=-0.2803;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:40,8:48:97.72:98,0,214	0/1:6,6:12:99:188,0,138	0/0:34,0:19:46.96:0,47,695	0/0:36,0:9:15.31:0,15,250	0/1:14,2:16:21.57:22,0,153	0/1:26,14:40:99:468,0,406	0/1:25,5:30:99:196,0,288	0/1:46,3:48:32.19:32,0,1667	0/1:24,5:29:99:113,0,294	0/1:33,6:39:99:228,0,986	0/1:20,3:23:73.52:74,0,504	0/0:25,0:25:71.29:0,71,1111	0/0:30,0:30:87.26:0,87,1305	0/1:21,3:24:59.48:59,0,348	0/1:34,13:47:99:449,0,195	0/1:27,6:33:99:105,0,630	0/0:18,0:18:31.15:0,31,378	0/1:24,2:25:22.74:23,0,401	0/1:30,6:33:99:295,0,861	0/1:25,4:29:57.17:57,0,903	0/0:38,1:36:27.44:0,27,543	0/0:23,0:22:56.38:0,56,911	0/0:26,0:26:66.22:0,66,1011	0/0:45,0:45:99:0,123,1880	0/1:24,5:29:79.96:80,0,615	0/1:33,5:38:99:124,0,1063	0/1:18,4:20:81.43:81,0,543	0/0:19,0:19:31.45:0,31,500
chr10	54190571	.	A	AG	20838.30	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=5.864;DP=776;FS=0.000;HRun=3;HaplotypeScore=115.8082;InbreedingCoeff=0.9991;MQ=85.14;MQ0=0;MQRankSum=-6.737;QD=36.11;ReadPosRankSum=2.086;VQSLOD=4.2385;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,42:46:99:1490,108,0	1/1:1,8:9:21.07:294,21,0	0/0:25,0:25:66.09:0,66,747	0/0:31,0:31:80.96:0,81,936	1/1:1,26:27:60.18:839,60,0	1/1:1,23:24:54.18:756,54,0	1/1:3,31:34:84.28:1176,84,0	1/1:1,33:34:96.29:1309,96,0	1/1:0,19:19:51.17:714,51,0	1/1:4,17:21:57.19:789,57,0	1/1:1,18:19:45.15:629,45,0	0/0:25,1:26:30.15:0,30,759	0/0:33,0:33:99:0,99,1188	1/1:1,23:24:66.22:919,66,0	1/1:1,29:30:81.27:1133,81,0	1/1:2,31:33:84.28:1176,84,0	1/1:0,35:35:99:1386,99,0	1/1:2,19:21:54.18:756,54,0	1/1:0,19:19:57.19:795,57,0	1/1:0,24:24:69.23:965,69,0	1/1:6,58:64:99:2337,169,0	0/0:37,0:37:96.29:0,96,1149	0/0:20,0:20:54.16:0,54,648	0/0:27,0:27:81.25:0,81,972	1/1:0,15:15:45.11:608,45,0	1/1:2,31:33:93.31:1298,93,0	1/1:2,27:29:66.22:923,66,0	1/1:0,17:17:39.13:546,39,0
chr10	54190789	.	G	GAT	6410.54	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-7.403;DP=722;FS=10.662;HRun=0;HaplotypeScore=96.9951;InbreedingCoeff=0.9953;MQ=82.60;MQ0=0;MQRankSum=-3.315;QD=48.56;ReadPosRankSum=1.262;VQSLOD=5.0185;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:57:99:0,159,2221	1/1:1,5:6:15.05:275,15,0	0/0:23,0:23:63.14:0,63,858	0/0:20,0:20:24.63:0,25,567	0/0:27,0:27:69.23:0,69,988	0/0:16,0:16:45.15:0,45,643	0/0:38,0:38:99:0,108,1545	0/0:39,0:39:99:0,114,1598	0/0:22,0:22:54.18:0,54,772	0/0:31,0:31:90.30:0,90,1290	0/0:16,0:16:48.15:0,48,672	0/0:32,0:32:96.32:0,96,1370	0/0:24,0:24:72.22:0,72,1011	0/0:28,0:28:84.28:0,84,1201	0/0:25,0:25:69.20:0,69,951	1/1:7,16:23:23.20:1046,23,0	0/0:31,0:31:75.25:0,75,1073	0/0:36,0:36:78.26:0,78,1110	1/1:4,21:26:72.21:1244,72,0	1/1:0,12:12:27.09:495,27,0	1/1:0,37:39:99:2033,111,0	0/0:17,0:17:48.16:0,48,683	0/0:24,0:24:69.20:0,69,942	0/0:38,0:38:99:0,105,1464	0/0:20,0:20:57.19:0,57,815	0/0:18,0:18:54.17:0,54,758	1/1:0,26:25:71.87:1318,72,0	0/0:8,0:8:24.05:0,24,308
chr10	54190843	.	GA	G	9047.79	PASS	AB=0.958;AC=33;AF=0.589;AN=56;BaseQRankSum=-1.933;DP=555;FS=6.479;HRun=1;HaplotypeScore=77.2839;InbreedingCoeff=0.3833;MQ=80.69;MQ0=0;MQRankSum=-2.650;QD=22.56;ReadPosRankSum=-1.682;VQSLOD=4.1236;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,27:37:99:1308,105,0	1/1:1,11:12:30.07:396,30,0	0/0:16,1:17:45.85:0,46,477	0/0:22,0:22:50.17:0,50,615	1/1:1,25:26:71.94:847,72,0	0/1:14,1:15:29.05:44,0,29	0/1:27,1:28:56.53:114,0,57	1/1:0,23:23:59.93:639,60,0	1/1:0,17:17:42.14:585,42,0	0/1:19,0:19:6.02:120,0,6	0/1:4,0:4:6.59:18,0,7	0/0:24,0:24:72.20:0,72,974	0/0:20,0:20:60.19:0,60,835	1/1:0,24:24:57.19:795,57,0	1/1:0,29:29:66.22:920,66,0	1/1:2,16:18:48.14:636,48,0	1/1:0,21:21:45.11:606,45,0	1/1:0,22:22:48.16:669,48,0	0/1:14,2:16:27.16:140,0,27	0/1:4,0:4:0.53:42,0,1	0/1:25,0:25:25.44:118,0,25	0/0:17,0:17:49.95:0,50,640	0/0:21,0:21:54.06:0,54,701	0/0:33,0:33:99:0,99,1355	1/1:0,23:23:57.19:793,57,0	1/1:14,0:14:7.77:148,8,0	0/1:8,2:10:28.80:61,0,29	0/1:14,0:14:30.35:48,0,30
chr10	54191227	.	TC	T	15384.77	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=4.225;DP=726;FS=0.000;HRun=2;HaplotypeScore=76.3689;InbreedingCoeff=0.9994;MQ=94.31;MQ0=0;MQRankSum=-2.572;QD=36.54;ReadPosRankSum=4.504;VQSLOD=5.2917;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,53:54:99:2026,157,0	0/0:22,0:22:63.21:0,63,932	0/0:32,0:32:93.30:0,93,1361	0/0:34,0:34:94.58:0,95,1350	1/1:0,21:21:57.19:740,57,0	1/1:0,24:24:69.22:896,69,0	1/1:0,27:27:72.23:935,72,0	1/1:2,38:40:99:1425,114,0	1/1:0,28:28:81.26:1052,81,0	1/1:1,22:23:69.22:889,69,0	1/1:0,24:24:69.22:896,69,0	0/0:26,0:26:75.25:0,75,1119	0/0:17,0:17:48.16:0,48,718	1/1:0,20:20:54.18:701,54,0	1/1:1,38:39:99:1362,105,0	0/0:22,0:22:63.20:0,63,919	1/1:1,27:28:75.24:974,75,0	1/1:0,31:31:90.29:1169,90,0	0/0:29,0:29:78.25:0,78,1145	0/0:16,0:16:45.14:0,45,653	0/0:30,0:30:90.30:0,90,1349	0/0:18,0:18:51.17:0,51,764	0/0:15,0:15:45.14:0,45,648	0/0:22,0:22:63.20:0,63,924	1/1:1,19:20:57.19:740,57,0	1/1:0,35:35:99:1309,102,0	0/0:22,0:22:66.21:0,66,968	1/1:0,7:7:21.07:273,21,0
chr10	54191456	.	A	AAAAAAAG	8013.57	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=10.516;DP=757;FS=0.912;HRun=0;HaplotypeScore=215.1321;InbreedingCoeff=0.9928;MQ=65.90;MQ0=1;MQRankSum=-13.794;QD=70.92;ReadPosRankSum=-3.680;VQSLOD=3.8209;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,138,3489	1/1:4,9:13:24.08:817,24,0	0/0:23,0:18:49.52:0,50,1087	0/0:26,0:22:53.65:0,54,1037	0/0:35,0:35:99:0,99,2186	0/0:33,0:33:93.29:0,93,2201	0/0:31,0:31:90.27:0,90,2137	0/0:32,0:32:93.31:0,93,2041	0/0:24,0:24:69.19:0,69,1677	0/0:35,0:35:96.31:0,96,2202	0/0:26,0:26:78.27:0,78,1858	0/0:22,0:22:63.20:0,63,1512	0/0:27,0:27:81.25:0,81,1939	0/0:27,0:27:81.28:0,81,1926	0/0:30,0:29:84.28:0,84,2047	1/1:5,10:17:27.09:911,27,0	0/0:42,0:42:99:0,117,2801	0/0:12,0:12:30.10:0,30,749	1/1:8,4:12:33.07:979,33,0	1/1:5,17:22:63.22:2207,63,0	1/1:1,9:11:15.05:524,15,0	0/0:29,0:29:84.24:0,84,1986	0/0:36,0:36:99:0,105,2365	0/0:35,0:35:99:0,102,2143	0/0:26,0:26:75.23:0,75,1769	0/0:41,0:41:99:0,120,2818	1/1:11,23:36:75.26:2575,75,0	0/0:5,0:5:15.05:0,15,381
chr10	54191563	.	A	AG	17929	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=16.834;DP=676;FS=3.326;HRun=0;HaplotypeScore=164.2506;InbreedingCoeff=0.9801;MQ=81.59;MQ0=0;MQRankSum=-7.248;QD=35.43;ReadPosRankSum=1.994;VQSLOD=4.3782;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,39:45:99:1464,107,0	1/1:2,13:15:36.11:463,36,0	0/0:20,0:20:57.15:0,57,754	0/0:24,0:24:53.32:0,53,762	1/1:8,24:32:74.40:971,74,0	1/1:3,20:23:63.21:971,63,0	1/1:9,27:36:99:1404,102,0	1/1:10,25:35:94.48:1269,94,0	1/1:1,17:18:50.91:739,51,0	1/1:5,20:25:70.35:1003,70,0	1/1:4,20:24:59.33:822,59,0	0/0:29,0:29:87.28:0,87,1196	0/0:25,0:25:75.25:0,75,1046	1/1:4,33:37:99:1451,102,0	1/1:5,22:27:72.21:1022,72,0	1/1:3,16:19:39.10:507,39,0	1/1:6,25:31:81.22:1178,81,0	1/1:2,16:18:49.41:727,49,0	1/1:1,7:8:19.60:239,20,0	1/1:0,32:32:90.28:1177,90,0	1/1:4,14:18:35.91:395,36,0	0/0:29,0:29:81.74:0,82,1130	0/0:17,0:17:51.16:0,51,696	0/0:26,0:26:78.26:0,78,1091	1/1:3,15:18:45.14:648,45,0	1/1:3,16:19:52.36:737,52,0	1/1:5,18:21:50.50:649,50,0	1/1:1,2:3:6.02:93,6,0
chr10	54191565	.	G	GT	18535.14	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=15.705;DP=707;FS=2.749;HRun=0;HaplotypeScore=167.0436;InbreedingCoeff=0.9919;MQ=82.55;MQ0=0;MQRankSum=-7.338;QD=35.04;ReadPosRankSum=3.392;VQSLOD=4.3880;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,39:50:92.33:1403,92,0	1/1:2,13:15:42.13:564,42,0	0/0:20,0:20:57.12:0,57,752	0/0:28,0:28:49.58:0,50,887	1/1:9,26:35:61.85:925,62,0	1/1:4,20:24:62.15:970,62,0	1/1:7,29:36:97.34:1394,97,0	1/1:10,26:36:95.82:1354,96,0	1/1:2,17:19:52.04:754,52,0	1/1:6,21:27:74.10:1056,74,0	1/1:5,20:25:57.45:885,57,0	0/0:27,0:27:81.27:0,81,1131	0/0:28,0:28:75.23:0,75,1027	1/1:4,32:37:99:1459,100,0	1/1:3,23:26:69.23:1021,69,0	1/1:3,16:19:32.29:510,32,0	1/1:5,27:32:84.27:1251,84,0	1/1:2,17:19:46.86:745,47,0	1/1:2,7:9:15.96:270,16,0	1/1:2,32:34:96.28:1240,96,0	1/1:1,19:20:39.13:542,39,0	0/0:31,0:31:82.20:0,82,1116	0/0:18,0:18:51.16:0,51,694	0/0:26,0:26:78.26:0,78,1091	1/1:4,14:18:43.66:667,44,0	1/1:4,16:20:37.86:687,38,0	1/1:1,23:22:43.54:688,44,0	1/1:2,2:4:12.01:149,12,0
chr10	54192822	.	C	CTCCTCCTCT	16700.84	PASS	AB=1.000;AC=35;AF=0.625;AN=56;BaseQRankSum=4.013;DP=563;FS=5.429;HRun=0;HaplotypeScore=206.8044;InbreedingCoeff=0.6174;MQ=49.56;MQ0=4;MQRankSum=-8.253;QD=44.65;ReadPosRankSum=-1.517;VQSLOD=4.1708;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:34,5:39:71.94:1784,72,0	0/1:9,0:9:37.47:37,0,171	0/0:19,0:11:10.38:0,10,173	0/1:12,0:10:11.67:12,0,84	1/1:16,2:18:33.10:979,33,0	1/1:15,2:17:42.14:1348,42,0	1/1:19,2:21:32.58:822,33,0	1/1:31,0:29:12.98:361,13,0	1/1:17,2:19:39.10:1030,39,0	1/1:22,1:23:54.17:1499,54,0	1/1:11,2:13:33.11:1023,33,0	0/0:26,0:26:60.17:0,60,1377	0/0:29,0:29:72.20:0,72,1755	1/1:23,1:24:63.17:1685,63,0	1/1:20,4:24:57.18:1638,57,0	0/1:16,0:16:18.46:18,0,301	1/1:12,3:15:24.86:887,25,0	1/1:14,1:15:37.68:961,38,0	0/1:17,0:15:0.37:0,0,213	0/1:17,0:17:16.73:17,0,326	0/0:31,0:30:11.26:0,11,104	0/0:17,0:17:36.06:0,36,836	0/0:14,0:14:42.12:0,42,961	0/0:29,0:29:60.40:0,60,1769	1/1:12,2:14:33.11:1036,33,0	1/1:24,1:25:48.16:1264,48,0	0/0:22,0:22:3.55:0,4,419	1/1:4,0:5:9.02:298,9,0
chr10	54192825	.	CTCCTCT	C	6946.49	PASS	AB=1.000;AC=34;AF=0.607;AN=56;BaseQRankSum=10.130;DP=583;FS=4.176;HRun=0;HaplotypeScore=221.1528;InbreedingCoeff=0.2393;MQ=48.13;MQ0=4;MQRankSum=-9.289;QD=15.51;ReadPosRankSum=3.376;VQSLOD=4.1213;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:41,0:41:54.95:215,0,55	1/1:4,5:9:18.06:330,18,0	0/0:16,0:10:9.03:0,9,205	0/1:12,0:10:4.64:5,0,94	1/1:18,0:18:5.18:93,5,0	0/1:20,0:20:37.17:272,0,37	0/1:23,0:23:6.85:109,0,7	0/1:36,0:34:52.26:52,0,168	1/1:17,0:17:7.40:289,7,0	1/1:23,0:23:9.17:294,9,0	1/1:15,0:15:24.97:230,25,0	0/0:27,0:27:60.18:0,60,1687	0/0:28,0:28:69.23:0,69,2057	0/1:26,0:26:44.56:387,0,45	1/1:23,0:23:33.71:598,34,0	1/1:8,9:17:45.07:774,45,0	0/1:16,0:16:25.40:251,0,25	0/1:15,0:15:52.71:271,0,53	1/1:12,7:16:24.05:449,24,0	1/1:8,9:17:39.02:675,39,0	1/1:10,22:29:15:246,15,0	0/0:16,0:16:33.11:0,33,900	0/0:14,0:14:39.13:0,39,1187	0/0:32,0:32:81.23:0,81,2313	1/1:14,0:14:15.10:343,15,0	0/1:27,0:27:39.96:218,0,40	1/1:12,10:22:42.02:805,42,0	0/1:6,0:6:17.85:44,0,18
chr10	54192828	.	CTCTTCCTCTTCCTCT	C	16621.53	PASS	AB=1.000;AC=30;AF=0.536;AN=56;BaseQRankSum=4.207;DP=572;FS=11.131;HRun=0;HaplotypeScore=282.7085;InbreedingCoeff=0.7256;MQ=45.75;MQ0=4;MQRankSum=-8.816;QD=48.89;ReadPosRankSum=-0.459;VQSLOD=3.0528;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:40,1:41:45.24:1774,45,0	0/1:9,0:9:6.54:7,0,340	0/0:13,0:5:9.91:0,10,172	0/1:11,0:9:11.66:12,0,84	1/1:15,3:18:36.11:901,36,0	1/1:19,2:21:57.17:1387,57,0	1/1:19,2:21:35.58:807,36,0	0/1:39,0:37:99:452,0,307	1/1:17,0:17:45.12:1048,45,0	1/1:21,2:23:57.18:1466,57,0	1/1:10,4:14:39.13:1061,39,0	0/0:26,0:26:63.20:0,63,2992	0/0:28,0:28:78.24:0,78,3217	1/1:23,3:26:65.20:1693,65,0	1/1:22,1:23:63.20:1647,63,0	0/0:17,0:17:25.33:0,25,752	1/1:16,0:16:15.78:766,16,0	1/1:14,1:15:35.55:873,36,0	0/0:19,0:16:27.55:0,28,478	0/0:17,0:17:10.73:0,11,721	0/0:30,0:27:11.76:0,12,104	0/0:17,0:17:39.06:0,39,1238	0/0:15,0:15:45.14:0,45,2281	0/0:30,0:30:69.68:0,70,4086	1/1:15,0:15:39.13:1066,39,0	1/1:23,2:25:63.21:1444,63,0	0/0:20,0:20:9.68:0,10,658	0/1:6,0:6:3.63:220,0,4
chr10	54192834	.	CTCT	C	5701.75	PASS	AB=0.896;AC=28;AF=0.500;AN=56;BaseQRankSum=9.793;DP=553;FS=0.731;HRun=0;HaplotypeScore=197.8487;InbreedingCoeff=-0.0708;MQ=41.32;MQ0=2;MQRankSum=-5.832;QD=13.26;ReadPosRankSum=4.349;VQSLOD=4.3796;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:40,3:43:67.12:441,0,67	1/1:7,0:7:8.13:43,8,0	0/0:10,0:4:9.02:0,9,140	0/1:7,0:6:11.66:12,0,67	1/1:15,2:17:15.80:263,16,0	0/1:16,5:21:17.52:349,0,18	1/1:17,1:18:30.94:320,31,0	0/1:36,3:37:99:117,0,720	0/1:10,5:15:0.08:340,0,0	1/1:22,2:24:14.26:471,14,0	1/1:10,3:13:32.77:338,33,0	0/0:23,0:23:63.20:0,63,1369	0/0:28,0:28:81.25:0,81,1749	0/1:17,8:25:23.07:558,0,23	1/1:12,9:21:37:659,37,0	0/1:18,0:18:49.54:114,0,50	0/1:12,4:16:8.17:250,0,8	0/1:15,2:17:75.90:322,0,76	0/1:23,0:19:57.89:58,0,200	0/1:16,0:16:32.81:86,0,33	0/1:28,0:25:7.71:40,0,8	0/0:15,0:15:42.07:0,42,797	0/0:15,0:15:45.14:0,45,970	0/0:32,0:32:90.31:0,90,2008	0/1:7,7:14:0.33:307,0,0	0/1:24,1:25:70.43:411,0,70	0/1:18,0:18:39.14:171,0,39	0/1:4,1:5:31.79:32,0,67
chr10	54192855	.	TTCC	T	1169.84	PASS	AB=0.848;AC=12;AF=0.214;AN=56;BaseQRankSum=11.897;DP=585;FS=0.992;HRun=0;HaplotypeScore=230.8109;InbreedingCoeff=-0.2963;MQ=43.06;MQ0=3;MQRankSum=-7.219;QD=4.62;ReadPosRankSum=5.286;VQSLOD=2.3128;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:34,4:38:19.86:20,0,380	0/0:10,0:10:25.89:0,26,332	0/0:14,0:6:5.98:0,6,126	0/0:15,0:6:14.08:0,14,242	0/0:16,2:18:3.19:0,3,158	0/1:24,4:28:99:125,0,417	0/1:16,0:16:18.09:18,0,189	0/0:20,0:35:77.78:0,78,1282	0/1:15,5:20:99:126,0,275	0/1:19,2:21:50.88:51,0,470	0/1:14,3:17:90.58:91,0,142	0/0:22,0:22:63.22:0,63,1344	0/0:25,0:25:72.19:0,72,1472	0/1:22,7:29:99:193,0,306	0/1:14,9:23:99:311,0,113	0/0:22,0:22:65.87:0,66,1002	0/1:14,4:18:99:128,0,180	0/1:16,2:18:83.06:83,0,267	0/0:21,0:18:51:0,51,921	0/0:18,0:18:48.15:0,48,726	0/0:24,0:21:14.84:0,15,205	0/0:12,0:12:33.11:0,33,705	0/0:15,0:15:45.15:0,45,1014	0/0:32,0:32:96.27:0,96,2109	0/1:9,7:16:99:163,0,161	0/0:27,1:28:2.47:0,2,779	0/0:17,0:17:47.75:0,48,747	0/1:8,1:9:8.16:8,0,193
chr10	54192870	.	TTCC	T	1893.37	PASS	AB=0.902;AC=22;AF=0.393;AN=56;BaseQRankSum=8.391;DP=579;FS=4.392;HRun=0;HaplotypeScore=199.8278;InbreedingCoeff=-0.1631;MQ=59.12;MQ0=9;MQRankSum=-4.050;QD=5.24;ReadPosRankSum=-0.013;VQSLOD=2.3443;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:24,4:28:54.44:87,0,54	0/1:13,0:13:4.82:5,0,101	0/0:30,0:19:24.32:0,24,504	0/0:38,0:14:19.20:0,19,332	0/1:10,2:12:4.41:14,0,4	0/1:19,4:23:42.29:135,0,42	0/1:16,0:16:10.67:11,0,17	0/1:29,0:27:87.25:172,0,87	1/1:12,5:17:1.72:181,2,0	0/1:22,2:24:99:212,0,145	0/1:14,3:17:20.14:56,0,20	0/0:26,0:26:75.24:0,75,1575	0/0:17,0:17:48.16:0,48,1017	0/1:21,8:29:1.12:219,0,1	1/1:10,9:19:18.96:336,19,0	0/0:23,0:23:34.66:0,35,351	0/1:16,4:20:54.60:187,0,55	0/1:15,2:17:59.48:77,0,59	0/1:13,0:13:46:46,0,193	0/1:19,0:19:19.17:19,0,208	1/1:15,0:12:2.97:20,3,0	0/0:11,0:11:30.10:0,30,640	0/0:17,0:17:48.09:0,48,884	0/0:37,0:37:96.29:0,96,1972	0/1:9,7:16:23.39:167,0,23	0/1:24,1:25:92.04:92,0,96	0/0:16,0:16:34.75:0,35,386	0/1:8,1:9:6.39:23,0,6
chr10	54192873	.	C	CTCCTCT	21102.20	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=3.344;DP=630;FS=6.778;HRun=0;HaplotypeScore=169.5739;InbreedingCoeff=0.9727;MQ=59.65;MQ0=9;MQRankSum=-11.629;QD=47.85;ReadPosRankSum=1.840;VQSLOD=4.6492;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,18:34:38.25:1012,38,0	1/1:5,9:15:24.08:634,24,0	0/0:37,0:22:37.57:0,38,571	0/0:39,0:14:16.94:0,17,334	1/1:5,8:13:23.95:615,24,0	1/1:7,16:23:51.18:1585,51,0	1/1:3,15:19:18.06:582,18,0	1/1:28,0:26:60.17:1117,60,0	1/1:5,13:18:42.14:1229,42,0	1/1:6,18:26:65.37:1690,65,0	1/1:8,10:19:27.09:765,27,0	0/0:30,0:30:75.22:0,75,1509	0/0:17,0:17:39.12:0,39,817	1/1:13,18:34:51.17:1409,51,0	1/1:12,9:23:42.14:1097,42,0	1/1:5,19:24:51.17:1605,51,0	1/1:8,12:21:32.39:670,32,0	1/1:6,14:22:23.82:572,24,0	1/1:5,8:16:24.13:871,24,0	1/1:5,13:19:36.12:1083,36,0	1/1:14,0:12:6.02:104,6,0	0/0:12,0:12:30.10:0,30,659	0/0:17,0:17:36.01:0,36,660	0/0:36,0:36:93.30:0,93,1917	1/1:7,8:16:36:862,36,0	1/1:5,22:29:75.26:2340,75,0	1/1:6,10:19:24.08:800,24,0	1/1:1,8:9:15.05:460,15,0
chr10	54193146	.	ACAACAACAAC	A	2266.63	PASS	AB=0.763;AC=36;AF=0.667;AN=54;BaseQRankSum=8.862;DP=231;FS=51.171;HRun=0;HaplotypeScore=68.6806;InbreedingCoeff=0.4521;MQ=60.31;MQ0=7;MQRankSum=-6.773;QD=17.17;ReadPosRankSum=-1.192;VQSLOD=0.0049;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:2,18:19:24.75:323,0,25	1/1:1,0:1:3.01:40,3,0	0/0:18,0:7:18.06:0,18,602	0/0:22,0:11:27.09:0,27,911	0/1:1,9:10:67.14:67,0,125	1/1:4,0:4:11.96:94,12,0	1/1:8,0:8:8.81:84,9,0	0/1:4,0:4:30.47:30,0,362	1/1:1,5:5:3.01:80,3,0	1/1:6,0:6:4.56:42,5,0	1/1:8,0:8:3.01:44,3,0	0/0:10,0:10:14.44:0,14,669	0/0:13,0:12:36.12:0,36,1789	1/1:4,0:4:12.04:241,12,0	1/1:0,4:4:3.01:80,3,0	1/1:1,0:1:3.01:63,3,0	1/1:1,15:16:12.04:324,12,0	1/1:9,0:9:8.75:287,9,0	1/1:9,0:7:20.90:184,21,0	1/1:4,0:3:8.95:75,9,0	1/1:4,0:3:2.76:20,3,0	0/0:12,0:12:27.98:0,28,1276	0/0:9,0:9:20.74:0,21,962	0/0:15,0:15:41.91:0,42,1805	1/1:3,0:3:9.03:176,9,0	0/1:7,0:7:19.94:81,0,20	1/1:4,0:4:11.97:116,12,0	./.
chr10	54193149	.	ACAACAAC	A	2456.68	PASS	AB=1.000;AC=37;AF=0.685;AN=54;BaseQRankSum=8.770;DP=232;FS=42.479;HRun=0;HaplotypeScore=60.1320;InbreedingCoeff=0.5589;MQ=68.68;MQ0=5;MQRankSum=-7.205;QD=17.93;ReadPosRankSum=0.286;VQSLOD=0.9311;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:19,0:19:0.85:224,0,1	1/1:1,0:1:3.01:40,3,0	0/0:17,0:8:21.07:0,21,588	0/0:22,0:14:36.11:0,36,1024	0/1:10,0:10:49.59:50,0,100	1/1:5,0:5:15.05:282,15,0	1/1:2,8:10:9.03:175,9,0	0/1:6,0:6:86.45:86,0,292	1/1:6,0:5:3.01:60,3,0	1/1:7,0:7:6.02:126,6,0	1/1:0,8:8:3.01:61,3,0	0/0:7,0:7:15.05:0,15,533	0/0:13,0:12:36.12:0,36,1448	1/1:4,0:4:12.04:171,12,0	1/1:4,0:4:3.01:60,3,0	1/1:1,0:1:3.01:43,3,0	1/1:16,0:16:12.04:244,12,0	1/1:9,0:9:8.18:182,8,0	1/1:9,0:7:20.88:180,21,0	1/1:4,0:3:8.95:69,9,0	1/1:3,0:3:2.97:20,3,0	0/0:10,0:10:30.10:0,30,1110	0/0:9,0:9:24.03:0,24,815	0/0:13,0:13:36.12:0,36,1443	1/1:3,0:3:9.02:110,9,0	1/1:7,1:8:21.06:372,21,0	1/1:3,0:4:11.88:87,12,0	./.
chr10	54193152	.	ACAAC	A	1896	PASS	AB=1.000;AC=38;AF=0.704;AN=54;BaseQRankSum=9.309;DP=232;FS=43.973;HRun=0;HaplotypeScore=55.1548;InbreedingCoeff=0.6105;MQ=76.87;MQ0=4;MQRankSum=-6.714;QD=13.54;ReadPosRankSum=0.715;VQSLOD=1.3310;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:18:14.96:161,15,0	1/1:2,0:2:5.97:47,6,0	0/0:18,0:10:30.07:0,30,520	0/0:21,0:15:39.07:0,39,753	0/1:10,0:10:26.57:27,0,61	1/1:5,0:5:15.05:222,15,0	1/1:9,1:10:9.03:156,9,0	0/1:7,0:7:70.63:71,0,176	1/1:6,0:5:3.01:39,3,0	1/1:0,7:7:6.02:102,6,0	1/1:8,0:8:3.01:41,3,0	0/0:6,0:6:12.04:0,12,332	0/0:14,0:13:39.13:0,39,1027	1/1:4,0:4:11.89:82,12,0	1/1:4,0:4:3.01:40,3,0	1/1:2,0:2:4.23:24,4,0	1/1:15,0:15:12.04:161,12,0	1/1:9,0:9:10.01:136,10,0	1/1:11,0:9:20.90:163,21,0	1/1:4,0:3:8.94:68,9,0	1/1:3,0:3:2.94:20,3,0	0/0:12,0:12:36.12:0,36,863	0/0:8,0:8:24.08:0,24,597	0/0:13,0:13:36.12:0,36,997	1/1:3,0:3:8.96:69,9,0	1/1:8,0:8:24.08:371,24,0	1/1:4,0:4:11.83:85,12,0	./.
chr10	54193155	.	AC	A	1502.29	PASS	AB=1.000;AC=38;AF=0.704;AN=54;BaseQRankSum=8.968;DP=241;FS=20.457;HRun=1;HaplotypeScore=50.7065;InbreedingCoeff=0.6461;MQ=79.77;MQ0=1;MQRankSum=-7.076;QD=10.02;ReadPosRankSum=-0.305;VQSLOD=-0.2335;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:18:14.84:100,15,0	1/1:2,0:2:5.97:47,6,0	0/0:15,0:10:24.08:0,24,356	0/0:20,1:17:45.12:0,45,621	0/1:10,0:10:3.90:4,0,13	1/1:0,5:5:15.05:195,15,0	1/1:9,1:10:9.03:114,9,0	0/1:7,0:7:45.56:62,0,46	1/1:5,0:5:2.96:19,3,0	1/1:7,0:7:6.02:76,6,0	1/1:8,0:8:3.01:41,3,0	0/0:6,0:6:12.04:0,12,192	0/0:14,0:13:39.12:0,39,590	1/1:6,0:6:12.33:79,12,0	1/1:4,0:4:2.97:20,3,0	1/1:3,0:3:4.33:25,4,0	1/1:15,0:15:11.87:79,12,0	1/1:9,0:9:14.19:90,14,0	1/1:13,0:12:16.48:115,16,0	1/1:6,0:6:14.87:106,15,0	1/1:4,0:4:3.47:26,3,0	0/0:13,0:13:39.10:0,39,562	0/0:8,0:8:24.08:0,24,373	0/0:14,0:14:24.96:0,25,555	1/1:4,0:4:6.95:58,7,0	1/1:1,7:8:24.08:323,24,0	1/1:6,0:6:12.86:111,13,0	./.
chr10	54193702	.	GC	G	2142.62	PASS	AB=0.695;AC=13;AF=0.232;AN=56;BaseQRankSum=10.083;DP=726;FS=2.877;HRun=1;HaplotypeScore=116.7556;InbreedingCoeff=-0.3080;MQ=72.63;MQ0=0;MQRankSum=-5.979;QD=6.07;ReadPosRankSum=-0.886;VQSLOD=0.2924;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,12:35:17.77:0,18,282	0/0:5,5:10:15.05:0,15,237	0/0:19,0:19:57.18:0,57,861	0/0:24,0:24:59.26:0,59,1016	0/0:10,9:19:15.05:0,15,240	0/0:11,13:23:21.07:0,21,334	0/1:10,11:21:23.80:24,0,218	0/1:24,17:41:99:575,0,979	0/0:13,14:27:30.10:0,30,474	0/1:17,11:28:99:379,0,650	0/1:18,13:31:15.40:15,0,350	0/0:22,0:22:66.23:0,66,1053	0/0:34,0:34:99:0,102,1630	0/1:13,20:33:93.18:93,0,257	0/1:23,13:36:5.84:6,0,488	0/1:17,14:31:89.57:90,0,392	0/1:11,12:23:50.88:51,0,385	0/1:10,6:16:99:159,0,433	0/1:15,10:25:99:230,0,580	0/0:14,12:26:12.04:0,12,188	0/0:15,9:24:4.44:0,4,92	0/0:34,0:34:96.31:0,96,1506	0/0:18,0:18:54.18:0,54,860	0/0:33,0:33:96.28:0,96,1491	0/0:13,11:24:12.04:0,12,191	0/1:19,19:38:99:600,0,800	0/1:14,7:21:13.61:14,0,312	0/1:5,4:9:57.85:58,0,218
chr10	54194480	.	TG	T	18657.86	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=13.126;DP=660;FS=0.314;HRun=1;HaplotypeScore=101.4785;InbreedingCoeff=0.9971;MQ=86.63;MQ0=0;MQRankSum=-4.408;QD=39.45;ReadPosRankSum=3.218;VQSLOD=5.0422;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,33:33:93.31:1298,93,0	1/1:0,13:13:36.12:500,36,0	0/0:28,0:28:73.41:0,73,1159	0/0:20,0:20:48.16:0,48,833	1/1:1,24:25:69.22:947,69,0	1/1:0,17:17:51.17:713,51,0	1/1:0,29:29:84.28:1174,84,0	1/1:0,26:26:75.25:1046,75,0	1/1:0,30:30:87.29:1210,87,0	1/1:1,22:23:66.22:923,66,0	1/1:0,18:18:51.17:713,51,0	0/0:25,0:25:75.26:0,75,1197	0/0:33,0:33:99:0,99,1582	1/1:0,24:24:69.23:958,69,0	1/1:0,15:15:42.14:587,42,0	1/1:0,19:19:54.18:754,54,0	1/1:0,39:39:99:1467,105,0	1/1:0,23:23:60.20:835,60,0	1/1:0,19:19:57.19:797,57,0	1/1:1,25:26:75.25:1047,75,0	1/1:0,24:24:63.19:880,63,0	0/0:25,0:25:75.26:0,75,1199	0/0:23,0:23:69.23:0,69,1084	0/0:33,0:33:99:0,99,1524	1/1:0,17:17:51.17:713,51,0	1/1:0,24:24:72.24:1007,72,0	1/1:1,23:24:63.21:880,63,0	1/1:0,5:5:15.05:210,15,0
chr10	54194557	.	GA	G	9245.68	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=14.979;DP=641;FS=6.301;HRun=8;HaplotypeScore=171.0498;InbreedingCoeff=0.9904;MQ=75.18;MQ0=0;MQRankSum=-13.727;QD=19.71;ReadPosRankSum=-0.066;VQSLOD=3.0508;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,25:30:51.05:492,51,0	1/1:1,9:10:15.01:145,15,0	0/0:24,0:24:57.10:0,57,619	0/0:14,0:14:30.06:0,30,338	1/1:3,24:27:51.04:481,51,0	1/1:1,21:22:42.05:405,42,0	1/1:4,22:26:54.07:521,54,0	1/1:8,22:30:69.10:666,69,0	1/1:7,18:25:51.04:480,51,0	1/1:5,22:27:63.09:603,63,0	1/1:4,12:16:21.01:203,21,0	0/0:19,0:19:48.15:0,48,580	0/0:33,0:33:90.20:0,90,1054	1/1:3,19:22:45.05:434,45,0	1/1:1,22:23:54.08:521,54,0	1/1:3,15:18:36.04:347,36,0	1/1:2,22:24:48.07:463,48,0	1/1:2,13:15:30.04:289,30,0	1/1:5,12:17:42.01:392,42,0	1/1:4,22:26:42.05:405,42,0	1/1:6,17:23:29.83:289,30,0	0/0:29,0:29:81.25:0,81,978	0/0:24,0:24:63.19:0,63,760	0/0:29,0:29:81.25:0,81,979	1/1:5,21:26:54.06:516,54,0	1/1:2,34:36:99:1014,105,0	1/1:2,20:22:48.06:463,48,0	1/1:0,4:4:12.02:116,12,0
chr10	54194576	.	G	GCGGC	28906.05	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=13.983;DP=660;FS=1.116;HRun=0;HaplotypeScore=185.3198;InbreedingCoeff=0.9964;MQ=66.66;MQ0=0;MQRankSum=-16.341;QD=57.70;ReadPosRankSum=-2.382;VQSLOD=4.8655;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,31:41:99:2134,99,0	1/1:4,5:9:18.03:385,18,0	0/0:17,0:17:51.09:0,51,889	0/0:12,0:12:27.54:0,28,432	1/1:12,17:29:45.14:1131,45,0	1/1:7,24:31:81.27:1940,81,0	1/1:11,14:26:60.12:1402,60,0	1/1:7,15:25:66.15:1479,66,0	1/1:5,18:23:63.22:1641,63,0	1/1:15,17:32:75.25:1951,75,0	1/1:6,8:16:24.08:559,24,0	0/0:21,0:21:57.18:0,57,1071	0/0:30,0:30:90.31:0,90,1743	1/1:7,22:29:78.27:1928,78,0	1/1:3,21:24:69.24:1733,69,0	1/1:8,14:22:60.20:1455,60,0	1/1:8,17:25:54.11:1255,54,0	1/1:3,13:16:33.09:901,33,0	1/1:4,5:9:30.10:788,30,0	1/1:10,10:21:36.11:839,36,0	1/1:12,16:29:56.24:1354,56,0	0/0:27,0:27:78.27:0,78,1508	0/0:20,0:20:57.20:0,57,1100	0/0:32,0:32:93.32:0,93,1788	1/1:10,15:25:60.20:1484,60,0	1/1:6,26:33:96.33:2514,96,0	1/1:8,18:26:63.21:1628,63,0	1/1:1,6:8:18.06:404,18,0
chr10	54195073	.	C	CTTTGGCAGAT	63829.04	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=-2.876;DP=681;FS=3.538;HRun=0;HaplotypeScore=204.6669;InbreedingCoeff=0.9889;MQ=63.05;MQ0=0;MQRankSum=-17.000;QD=121.58;ReadPosRankSum=-2.922;VQSLOD=4.1988;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,21:36:81.28:4115,81,0	1/1:1,10:14:39.13:1955,39,0	0/0:14,0:14:33.11:0,33,986	0/0:13,0:13:22.79:0,23,582	1/1:4,10:15:42.10:1973,42,0	1/1:15,15:32:84.29:4138,84,0	1/1:12,13:33:72.25:3722,72,0	1/1:20,10:33:96.33:4429,96,0	1/1:13,18:34:84.21:4133,84,0	1/1:14,7:22:63.17:2899,63,0	1/1:7,9:16:48.08:1954,48,0	0/0:33,0:33:96.29:0,96,2969	0/0:24,0:24:72.25:0,72,2368	1/1:9,12:28:60.21:2917,60,0	1/1:4,22:30:78.27:4043,78,0	1/1:7,13:21:57.19:2719,57,0	1/1:10,13:23:63.22:3209,63,0	1/1:8,14:24:66.23:3149,66,0	1/1:10,8:20:54.19:2348,54,0	1/1:9,8:23:51.05:2081,51,0	1/1:14,18:41:84.29:4123,84,0	0/0:20,0:20:57.20:0,57,1863	0/0:23,0:23:66.23:0,66,2160	0/0:29,0:29:84.27:0,84,2640	1/1:8,10:19:51.18:2680,51,0	1/1:8,13:24:69.20:3261,69,0	1/1:13,15:29:71.87:3508,72,0	1/1:3,1:8:9.03:473,9,0
chr10	54196422	.	T	TCTCC	13804.60	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-14.240;DP=662;FS=16.099;HRun=0;HaplotypeScore=96.7963;InbreedingCoeff=0.9974;MQ=63.52;MQ0=7;MQRankSum=-3.191;QD=43.14;ReadPosRankSum=2.196;VQSLOD=4.4579;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,32:35:75.73:1846,76,0	0/0:10,0:10:27.09:0,27,458	0/0:29,0:23:27.32:0,27,452	0/0:51,0:28:30.27:0,30,479	1/1:3,15:18:30.10:661,30,0	1/1:3,9:15:18.06:447,18,0	1/1:8,18:28:36.12:889,36,0	1/1:12,15:27:45.14:944,45,0	1/1:3,11:16:30.10:749,30,0	1/1:8,23:32:69.22:1642,69,0	1/1:1,12:16:30.10:748,30,0	0/0:27,0:27:72.22:0,72,1165	0/0:28,0:28:69.19:0,69,1110	1/1:1,15:18:39.13:972,39,0	1/1:6,17:24:36.12:898,36,0	0/0:26,0:26:60.19:0,60,979	1/1:4,16:20:33.11:821,33,0	1/1:4,11:14:30.10:749,30,0	0/0:26,0:26:54.16:0,54,883	0/0:17,0:17:45.15:0,45,741	0/0:45,0:46:99:0,102,1721	0/0:18,0:18:48.15:0,48,785	0/0:12,0:12:27.09:0,27,458	0/0:29,0:29:75.26:0,75,1247	1/1:6,13:19:30.10:746,30,0	1/1:4,18:20:51.18:1239,51,0	0/0:22,0:22:60.20:0,60,1009	1/1:6,7:13:21.07:451,21,0
chr10	54196613	.	AGGGCTCTGTT	A	17057.99	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=17.695;DP=599;FS=0.000;HRun=0;HaplotypeScore=180.9531;InbreedingCoeff=0.9877;MQ=90.91;MQ0=0;MQRankSum=-15.534;QD=59.85;ReadPosRankSum=3.077;VQSLOD=4.6047;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,29:33:51.12:1526,51,0	0/0:8,0:8:24.06:0,24,1053	0/0:32,0:33:80.43:0,80,3573	0/0:22,0:22:54.19:0,54,2473	1/1:1,21:22:33.11:1016,33,0	1/1:0,16:16:42.14:1370,42,0	1/1:0,28:28:45.15:1465,45,0	1/1:1,19:20:53.98:1049,54,0	1/1:1,20:21:54.19:1760,54,0	1/1:2,21:23:59.70:1600,60,0	1/1:1,7:8:9.03:294,9,0	0/0:26,0:26:75.26:0,75,3678	0/0:17,0:17:48.16:0,48,2308	1/1:1,21:22:54.19:1730,54,0	1/1:1,22:23:51.18:1657,51,0	0/0:26,0:26:75.24:0,75,3552	1/1:1,15:16:15.05:489,15,0	1/1:0,12:12:21.07:685,21,0	0/0:15,0:15:39.11:0,39,1663	0/0:25,0:25:72.21:0,72,3241	0/0:35,0:35:99:0,102,4783	0/0:18,0:18:54.17:0,54,2653	0/0:15,0:15:36.11:0,36,1643	0/0:37,0:37:99:0,102,5183	1/1:0,21:21:33.11:1076,33,0	1/1:3,10:13:27.08:755,27,0	0/0:37,0:37:99:0,102,5109	1/1:0,7:7:18.06:587,18,0
chr10	54197804	.	T	TAC	21691.21	PASS	AB=0.750;AC=41;AF=0.732;AN=56;BaseQRankSum=6.211;DP=921;FS=1.746;HRun=0;HaplotypeScore=211.3021;InbreedingCoeff=0.9361;MQ=58.48;MQ0=4;MQRankSum=-1.087;QD=31.53;ReadPosRankSum=4.244;VQSLOD=5.5108;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:12,39:51:78.10:1466,78,0	1/1:2,3:5:8.98:121,9,0	0/0:38,0:31:54.36:0,54,758	0/0:31,0:26:66.06:0,66,763	1/1:7,20:27:47.90:816,48,0	1/1:8,14:22:36.12:612,36,0	1/1:7,28:35:46.15:1004,46,0	1/1:7,40:48:99:1934,123,0	1/1:12,29:41:75.26:1272,75,0	1/1:7,27:34:80.90:1337,81,0	1/1:1,16:17:48.16:816,48,0	0/0:35,0:35:93.26:0,93,1166	0/0:29,0:29:78.25:0,78,1013	1/1:9,21:30:51.17:867,51,0	1/1:9,37:46:93.32:1581,93,0	1/1:9,22:31:47.67:815,48,0	1/1:9,23:32:52.01:1000,52,0	1/1:8,19:26:47.05:926,47,0	1/1:12,19:30:61.71:904,62,0	1/1:6,19:25:45.14:739,45,0	1/1:13,49:62:74.26:1317,74,0	0/0:30,0:30:87.23:0,87,1073	0/0:31,0:31:90.26:0,90,1137	0/0:39,0:39:99:0,99,1207	1/1:7,33:40:75.26:1276,75,0	1/1:9,37:46:99:1834,109,0	1/1:5,24:29:57.19:948,57,0	0/1:6,3:9:1.39:107,0,1
chr10	54197812	.	CATAT	C	498.88	PASS	AB=0.879;AC=7;AF=0.125;AN=56;BaseQRankSum=7.529;DP=945;FS=4.409;HRun=0;HaplotypeScore=320.4269;InbreedingCoeff=-0.1488;MQ=55.69;MQ0=4;MQRankSum=-7.707;QD=2.77;ReadPosRankSum=-6.030;VQSLOD=0.9764;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:49,5:54:85.08:0,85,1558	0/1:7,1:8:23.79:24,0,183	0/0:45,0:38:97.36:0,97,2399	0/0:35,0:30:81.19:0,81,1711	0/0:24,6:30:45.30:0,45,882	0/0:19,4:23:36.11:0,36,671	0/0:30,4:34:29.50:0,29,1219	0/0:49,0:49:99:0,131,2317	0/0:36,5:42:75.25:0,75,1370	0/1:32,2:34:21.31:21,0,1341	0/0:19,0:19:47.65:0,48,905	0/0:34,0:34:99:0,99,2673	0/0:30,0:30:87.30:0,87,2351	0/0:26,3:29:35.75:0,36,933	0/0:45,5:50:92.53:0,93,1734	0/0:28,4:32:4.39:0,4,918	0/1:27,4:31:63.65:64,0,996	0/1:21,2:23:27.50:27,0,992	0/1:23,2:24:51.56:52,0,1006	0/0:23,1:24:44.80:0,45,840	0/0:62,5:67:85.23:0,85,1505	0/0:32,0:32:96.29:0,96,2417	0/0:33,0:33:96.29:0,96,2493	0/0:36,0:36:99:0,102,2686	0/0:35,4:40:73.85:0,74,1348	0/1:43,6:49:99:240,0,1793	0/0:26,1:27:57.19:0,57,1052	0/1:5,4:9:99:201,0,200
chr10	54197836	.	A	AGC	4439.77	PASS	AB=0.839;AC=21;AF=0.375;AN=56;BaseQRankSum=12.350;DP=974;FS=2.674;HRun=0;HaplotypeScore=326.6587;InbreedingCoeff=-0.5917;MQ=51.32;MQ0=4;MQRankSum=-14.370;QD=6.00;ReadPosRankSum=-8.641;VQSLOD=1.8278;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:52,7:59:99:194,0,1311	0/1:8,3:11:51.82:52,0,253	0/0:46,0:33:87.19:0,87,1276	0/0:36,0:28:78.40:0,78,1091	0/1:25,9:34:99:220,0,479	0/1:17,10:27:99:301,0,582	0/1:33,7:40:99:182,0,964	0/1:51,2:53:99:192,0,1530	0/1:29,13:42:99:462,0,788	0/1:32,5:37:99:226,0,1189	0/1:17,5:22:99:112,0,594	0/0:27,0:27:78.27:0,78,1255	0/0:28,0:28:81.28:0,81,1306	0/1:21,5:26:99:143,0,772	0/1:41,13:54:99:448,0,1233	0/1:23,6:29:99:195,0,860	0/1:25,4:29:99:105,0,711	0/1:25,3:28:89.19:89,0,802	0/1:28,5:31:99:190,0,987	0/1:23,3:26:99:197,0,538	0/1:60,3:62:6.51:7,0,1160	0/0:25,0:25:75.26:0,75,1212	0/0:30,0:30:90.27:0,90,1419	0/0:42,0:42:99:0,117,1793	0/1:30,9:39:99:348,0,917	0/1:42,11:53:99:447,0,1600	0/1:21,5:26:99:190,0,590	0/1:5,4:9:99:142,0,161
chr10	54200791	.	G	GTCCTCCTCCTC	811.33	PASS	AB=0.584;AC=7;AF=0.125;AN=56;BaseQRankSum=1.040;DP=687;FS=0.618;HRun=0;HaplotypeScore=248.3302;InbreedingCoeff=-0.1545;MQ=69.96;MQ0=3;MQRankSum=-1.033;QD=6.34;ReadPosRankSum=-5.580;VQSLOD=0.9556;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:29:67.37:0,67,770	0/1:3,1:9:97.72:175,0,98	0/0:36,0:25:54.37:0,54,1190	0/0:29,0:27:63.32:0,63,927	0/0:10,0:30:77.72:0,78,891	0/0:6,0:38:83.35:0,83,833	0/0:8,0:29:19.68:0,20,634	0/0:18,0:26:39.65:0,40,773	0/0:10,0:30:30.64:0,31,669	0/1:6,0:22:23.82:24,0,524	0/0:6,0:21:54.12:0,54,612	0/0:22,0:22:66.22:0,66,1866	0/0:23,0:23:69.24:0,69,1890	0/0:7,0:18:44.91:0,45,583	0/1:8,0:22:19.23:19,0,468	0/1:5,3:18:99:608,0,154	0/0:5,0:25:0.92:0,1,442	0/1:3,0:15:25.07:25,0,354	0/1:10,0:23:66.84:67,0,500	0/1:2,0:18:22.98:23,0,336	0/0:5,0:31:72.16:0,72,779	0/0:33,0:33:99:0,99,2758	0/0:25,0:25:75.18:0,75,2151	0/0:22,0:22:66.21:0,66,2093	0/0:7,0:28:68.83:0,69,750	0/0:8,0:28:40.39:0,40,778	0/0:5,0:19:12.30:0,12,512	0/0:5,0:14:26.98:0,27,290
chr10	54201696	.	GA	G	11762.15	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=4.558;DP=565;FS=8.055;HRun=7;HaplotypeScore=63.4288;InbreedingCoeff=0.9902;MQ=83.63;MQ0=0;MQRankSum=-5.189;QD=27.10;ReadPosRankSum=2.122;VQSLOD=5.5923;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,41:51:99:1430,141,0	1/1:0,9:9:27.06:275,27,0	0/0:23,0:23:25.11:0,25,363	0/0:21,0:20:10:0,10,395	1/1:1,16:17:48.11:489,48,0	1/1:3,11:14:39.09:397,39,0	1/1:3,19:22:54.12:551,54,0	1/1:6,26:32:78.13:780,78,0	1/1:3,12:15:42.08:422,42,0	1/1:2,8:10:24.05:244,24,0	1/1:5,14:19:51.07:501,51,0	0/0:17,0:17:51.16:0,51,630	0/0:20,0:20:60.18:0,60,740	1/1:0,22:22:63.14:642,63,0	1/1:4,11:15:26.92:275,27,0	1/1:0,12:12:33.08:337,33,0	1/1:1,28:29:75.17:765,75,0	1/1:4,19:23:60.14:612,60,0	1/1:1,18:19:54.11:545,54,0	1/1:2,16:18:51.12:520,51,0	1/1:2,21:23:60.14:612,60,0	0/0:16,0:16:43.02:0,43,530	0/0:16,0:16:48.14:0,48,591	0/0:18,0:18:45.09:0,45,534	1/1:1,18:19:54.12:551,54,0	1/1:2,22:24:72.15:728,72,0	1/1:2,26:28:69.16:704,69,0	1/1:1,12:13:39.02:384,39,0
chr10	54201791	.	TATA	T	19538.67	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=10.417;DP=643;FS=3.342;HRun=0;HaplotypeScore=113.0004;InbreedingCoeff=0.9970;MQ=88.61;MQ0=0;MQRankSum=-5.300;QD=42.20;ReadPosRankSum=4.302;VQSLOD=6.4858;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,49:51:99:1882,114,0	1/1:0,7:7:15.01:224,15,0	0/0:24,0:23:63.20:0,63,1270	0/0:34,0:34:93.21:0,93,1901	1/1:0,20:20:42.14:716,42,0	1/1:1,14:15:38.92:509,39,0	1/1:0,28:28:66.22:1110,66,0	1/1:3,21:24:66.22:1099,66,0	1/1:1,15:16:36.12:614,36,0	1/1:1,21:22:63.20:1047,63,0	1/1:1,25:26:60.21:1023,60,0	0/0:28,0:28:84.27:0,84,1893	0/0:25,0:25:75.26:0,75,1729	1/1:0,24:24:66.18:1095,66,0	1/1:1,20:21:54.10:859,54,0	1/1:0,21:21:63.17:1043,63,0	1/1:0,20:20:48.16:819,48,0	1/1:1,26:27:78.27:1318,78,0	1/1:0,19:19:57.19:965,57,0	1/1:1,30:31:75.21:1248,75,0	1/1:0,26:26:60.16:992,60,0	0/0:22,0:22:66.21:0,66,1445	0/0:24,0:24:69.24:0,69,1575	0/0:23,0:23:69.24:0,69,1571	1/1:1,14:15:39.05:603,39,0	1/1:0,23:23:69.21:1128,69,0	1/1:0,14:14:42.11:686,42,0	1/1:4,9:13:33.11:558,33,0
chr10	54202466	.	AACTC	A	27942.94	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=14.419;DP=766;FS=8.836;HRun=0;HaplotypeScore=155.9268;InbreedingCoeff=0.9999;MQ=55.09;MQ0=1;MQRankSum=-1.987;QD=48.51;ReadPosRankSum=3.531;VQSLOD=5.7098;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,37:41:80.61:1549,81,0	1/1:0,17:17:51.17:989,51,0	0/0:17,0:15:45.15:0,45,1150	0/0:35,0:30:87.18:0,87,2188	1/1:1,29:30:72.12:1231,72,0	1/1:1,24:25:63.22:1216,63,0	1/1:2,22:24:42.14:814,42,0	1/1:4,27:31:81.24:1419,81,0	1/1:1,19:20:51.17:989,51,0	1/1:1,37:38:99:2058,114,0	1/1:0,11:11:30.10:577,30,0	0/0:38,0:38:99:0,108,2924	0/0:34,0:34:99:0,99,2658	1/1:0,32:32:87.30:1675,87,0	1/1:0,36:36:96.33:1861,96,0	1/1:2,28:30:81.28:1570,81,0	1/1:2,24:26:60.21:1163,60,0	1/1:0,16:16:42.14:809,42,0	1/1:3,23:25:66.18:1163,66,0	1/1:0,22:22:63.22:1198,63,0	1/1:1,34:35:84.29:1623,84,0	0/0:29,0:29:87.30:0,87,2332	0/0:19,0:19:57.20:0,57,1528	0/0:18,0:18:54.19:0,54,1459	1/1:0,26:26:66.23:1260,66,0	1/1:0,33:33:99:1818,99,0	1/1:1,28:29:75.26:1449,75,0	1/1:1,27:28:78.27:1512,78,0
chr10	54203945	.	T	TG	10289.44	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=17.063;DP=573;FS=3.120;HRun=1;HaplotypeScore=292.5187;InbreedingCoeff=0.9984;MQ=69.57;MQ0=0;MQRankSum=-16.685;QD=24.10;ReadPosRankSum=2.104;VQSLOD=4.2047;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:37,0:37:99:900,102,0	1/1:10,1:11:29.98:257,30,0	0/0:15,0:15:39.09:0,39,488	0/0:21,0:21:54.14:0,54,671	1/1:30,3:33:86.85:729,87,0	1/1:17,0:17:50.98:453,51,0	1/1:24,2:26:74.73:641,75,0	1/1:26,2:28:80.93:703,81,0	1/1:21,3:24:68.97:596,69,0	1/1:26,1:28:83.30:668,83,0	1/1:18,2:20:53.59:446,54,0	0/0:15,0:15:45.15:0,45,584	0/0:33,0:33:96.28:0,96,1214	1/1:19,3:22:65.68:568,66,0	1/1:21,4:25:66:601,66,0	1/1:15,2:17:44.95:382,45,0	1/1:12,3:15:35.98:326,36,0	1/1:8,2:10:26.96:233,27,0	1/1:11,1:12:29.98:267,30,0	1/1:22,1:23:63.96:527,64,0	1/1:10,1:11:24.02:231,24,0	0/0:20,0:20:60.16:0,60,747	0/0:15,0:15:42.12:0,42,531	0/0:27,0:27:81.26:0,81,1050	1/1:16,1:17:51:464,51,0	1/1:20,1:21:59.94:516,60,0	1/1:19,4:23:65.97:582,66,0	1/1:7,0:7:21:200,21,0
chr10	54203946	.	GTACAAAATA	G	25716.64	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=16.636;DP=458;FS=8.145;HRun=0;HaplotypeScore=245.8737;InbreedingCoeff=0.9916;MQ=74.64;MQ0=0;MQRankSum=-16.242;QD=82.69;ReadPosRankSum=4.804;VQSLOD=3.5506;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,27:30:87.19:2454,87,0	1/1:1,8:9:27.09:741,27,0	0/0:14,0:14:42.11:0,42,1649	0/0:21,0:21:60.21:0,60,2734	1/1:3,20:23:66.18:1799,66,0	1/1:1,11:12:36.12:1079,36,0	1/1:1,18:19:57.20:1680,57,0	1/1:3,12:15:45.15:1304,45,0	1/1:3,18:21:60.21:1742,60,0	1/1:2,21:23:69.24:2000,69,0	1/1:2,14:16:45.15:1182,45,0	0/0:15,0:15:45.15:0,45,2202	0/0:33,0:33:99:0,99,4261	1/1:3,16:19:57.20:1573,57,0	1/1:4,14:18:45.15:1300,45,0	1/1:2,11:13:36.12:1031,36,0	1/1:5,4:9:27.05:671,27,0	1/1:2,5:7:21.07:618,21,0	1/1:1,4:5:15.05:449,15,0	1/1:1,15:16:48.16:1399,48,0	1/1:2,5:7:18.06:451,18,0	0/0:21,0:21:63.19:0,63,2990	0/0:15,0:15:45.15:0,45,2019	0/0:28,0:28:84.29:0,84,3865	1/1:1,11:12:36.12:1069,36,0	1/1:1,14:15:45.15:1325,45,0	1/1:4,12:17:48.16:1379,48,0	1/1:0,5:5:15.05:470,15,0
chr10	54203947	.	T	TTGTCAAGA	8902.29	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=15.374;DP=453;FS=27.806;HRun=0;HaplotypeScore=295.1525;InbreedingCoeff=0.9819;MQ=74.81;MQ0=0;MQRankSum=-15.941;QD=29.00;ReadPosRankSum=4.381;VQSLOD=3.2911;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:29:30.06:371,30,0	1/1:9,0:9:22.38:514,22,0	0/0:14,0:14:39.13:0,39,1096	0/0:20,0:21:60.12:0,60,1549	1/1:20,3:23:36.25:731,36,0	1/1:12,0:12:25.16:94,25,0	1/1:19,0:19:36.64:389,37,0	1/1:12,2:14:40.60:631,41,0	1/1:20,1:21:30.64:494,31,0	1/1:22,1:23:28.46:552,28,0	1/1:16,0:16:24.56:433,25,0	0/0:15,0:15:45.15:0,45,1363	0/0:31,0:31:93.28:0,93,2602	1/1:16,2:19:16.51:724,17,0	1/1:16,1:17:22.92:536,23,0	1/1:13,0:13:26.37:396,26,0	1/1:6,3:9:20.01:405,20,0	1/1:5,2:7:19.80:415,20,0	1/1:4,1:5:14.04:217,14,0	1/1:15,1:16:32.65:434,33,0	1/1:6,0:6:14.44:224,14,0	0/0:20,0:20:60.19:0,60,1663	0/0:16,0:16:45.14:0,45,1187	0/0:29,0:29:84.23:0,84,2385	1/1:11,1:12:23.80:286,24,0	1/1:14,1:15:37.28:402,37,0	1/1:14,3:17:30.70:601,31,0	1/1:5,0:5:12.98:54,13,0
chr10	54203957	.	T	TTG	12028.80	PASS	AB=0.592;AC=39;AF=0.696;AN=56;BaseQRankSum=16.911;DP=453;FS=2.679;HRun=0;HaplotypeScore=233.3466;InbreedingCoeff=0.7606;MQ=76.61;MQ0=0;MQRankSum=-15.990;QD=39.96;ReadPosRankSum=5.855;VQSLOD=4.6130;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,27:27:81.27:1262,81,0	1/1:0,8:8:24.07:335,24,0	0/0:13,0:13:36.12:0,36,544	0/0:24,0:24:69.16:0,69,951	1/1:6,18:24:61.06:819,61,0	1/1:1,11:12:33.11:530,33,0	1/1:1,18:19:54.17:830,54,0	1/1:3,12:15:2.21:564,2,0	1/1:3,18:21:54.64:815,55,0	1/1:4,19:23:60.27:929,60,0	1/1:0,15:15:42.13:614,42,0	0/0:20,0:20:54.17:0,54,799	0/0:28,0:28:78.25:0,78,1172	1/1:4,16:20:50.32:676,50,0	1/1:2,14:16:45.61:648,46,0	1/1:0,11:11:33.10:493,33,0	0/1:3,4:7:3.94:178,0,4	0/1:2,5:7:24.87:234,0,25	0/1:1,4:5:2.44:189,0,2	1/1:1,16:17:48.15:717,48,0	1/1:0,5:5:12.03:173,12,0	0/0:22,0:22:66.22:0,66,1009	0/0:18,0:18:54.17:0,54,801	0/0:27,0:27:75.24:0,75,1122	1/1:1,11:12:36.11:543,36,0	1/1:2,13:15:41.35:639,41,0	1/1:5,12:17:40.84:593,41,0	1/1:0,5:5:15.05:249,15,0
chr10	54204377	.	T	TGG	12348.32	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=-4.449;DP=630;FS=9.582;HRun=7;HaplotypeScore=92.4162;InbreedingCoeff=0.9934;MQ=88.46;MQ0=2;MQRankSum=-5.146;QD=25.62;ReadPosRankSum=4.574;VQSLOD=3.3705;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,40:52:99:1705,113,0	1/1:2,0:9:12.74:48,13,0	0/0:31,0:31:60.14:0,60,682	0/0:31,0:31:63.11:0,63,697	1/1:2,15:17:42.14:689,42,0	1/1:1,16:17:39.07:599,39,0	1/1:3,20:23:48.16:788,48,0	1/1:8,22:31:63.10:891,63,0	1/1:2,16:18:42.14:689,42,0	1/1:7,18:25:54.10:805,54,0	1/1:3,18:22:47.65:731,48,0	0/0:15,0:15:42.10:0,42,468	0/0:18,0:18:42.10:0,42,485	1/1:3,11:16:26.06:362,26,0	1/1:6,14:21:41.59:620,42,0	1/1:5,0:27:54.90:193,55,0	1/1:6,17:23:57.19:913,57,0	1/1:2,15:18:41.52:616,42,0	1/1:5,0:26:55.61:220,56,0	1/1:4,0:25:42.42:149,42,0	1/1:4,0:23:44.92:159,45,0	0/0:14,0:14:42.11:0,42,477	0/0:19,0:19:48.09:0,48,529	0/0:19,0:19:54.16:0,54,628	1/1:4,21:25:39.13:640,39,0	1/1:1,24:27:74.50:1043,74,0	1/1:1,0:24:54.90:194,55,0	1/1:2,9:11:18.06:295,18,0
chr10	54204807	.	A	AC	18818.36	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=11.841;DP=620;FS=4.384;HRun=0;HaplotypeScore=92.4280;InbreedingCoeff=0.9966;MQ=76.18;MQ0=0;MQRankSum=-3.153;QD=38.48;ReadPosRankSum=2.155;VQSLOD=5.2230;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,55:56:99:2205,153,0	1/1:0,7:7:15.05:221,15,0	0/0:8,0:8:24.08:0,24,332	0/0:20,0:20:56.92:0,57,677	1/1:0,19:19:54.18:764,54,0	1/1:0,20:20:60.20:875,60,0	1/1:0,23:23:60.20:870,60,0	1/1:0,28:28:84.23:1148,84,0	1/1:0,24:24:69.23:998,69,0	1/1:0,16:16:48.14:657,48,0	1/1:1,12:13:33.11:477,33,0	0/0:29,0:29:84.20:0,84,1115	0/0:21,0:21:62.87:0,63,782	1/1:2,22:24:60.12:846,60,0	1/1:0,20:20:51.17:739,51,0	1/1:1,19:20:48.16:695,48,0	1/1:0,32:32:81.27:1176,81,0	1/1:0,26:26:60.20:870,60,0	1/1:0,31:32:96.25:1324,96,0	1/1:1,21:22:57.19:829,57,0	1/1:1,34:35:90.30:1307,90,0	0/0:11,0:11:33.11:0,33,461	0/0:17,0:17:51.16:0,51,688	0/0:25,0:25:75.25:0,75,1047	1/1:0,16:16:45.15:656,45,0	1/1:0,23:23:66.17:897,66,0	1/1:0,23:23:57.19:831,57,0	1/1:0,10:10:30.10:436,30,0
chr10	54206716	.	C	CTGATGATGATGATGA	12558.26	PASS	AB=0.982;AC=33;AF=0.589;AN=56;BaseQRankSum=0.533;DP=832;FS=8.843;HRun=0;HaplotypeScore=305.3077;InbreedingCoeff=0.6312;MQ=68.84;MQ0=3;MQRankSum=-9.150;QD=23.13;ReadPosRankSum=-5.976;VQSLOD=1.6612;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:19,16:36:3.01:213,3,0	0/0:7,0:7:5.97:0,6,73	0/0:24,0:19:2.37:0,2,8	0/0:31,0:25:5.85:0,6,63	1/1:28,16:47:7.33:429,7,0	1/1:12,9:26:6.02:348,6,0	1/1:31,0:31:21.04:361,21,0	1/1:25,0:25:30.03:420,30,0	1/1:13,25:40:21.07:1412,21,0	1/1:36,0:35:66.17:2276,66,0	1/1:12,9:23:8.76:630,9,0	0/0:35,0:35:66.17:0,66,1934	0/0:43,0:44:93.20:0,93,2698	1/1:13,0:32:12.04:721,12,0	1/1:17,17:37:21.05:1305,21,0	0/1:39,0:39:6.54:7,0,628	1/1:21,7:30:26.76:1696,27,0	1/1:14,8:25:15.05:854,15,0	0/1:14,0:18:51.59:52,0,143	0/0:17,0:22:16.60:0,17,204	0/1:26,0:32:61.68:62,0,128	0/0:26,0:26:36.08:0,36,992	0/0:29,0:29:42.14:0,42,1246	0/0:32,0:32:72.17:0,72,2295	1/1:13,15:29:3:213,3,0	1/1:29,0:28:42.11:1366,42,0	0/0:30,0:39:39.06:0,39,621	1/1:7,0:7:6.02:195,6,0
chr10	54206744	.	T	TGAC	1906.26	PASS	AB=0.930;AC=14;AF=0.250;AN=56;BaseQRankSum=11.448;DP=829;FS=2.103;HRun=0;HaplotypeScore=186.0265;InbreedingCoeff=0.3412;MQ=50.42;MQ0=11;MQRankSum=-0.706;QD=6.78;ReadPosRankSum=6.846;VQSLOD=2.4722;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:27.45:0,27,222	1/1:6,0:6:5.96:44,6,0	0/0:21,0:11:29.94:0,30,257	0/0:19,0:14:22.34:0,22,302	0/0:42,0:42:33.32:0,33,262	0/1:24,0:24:12.42:12,0,163	0/0:33,0:33:32.14:0,32,395	0/0:40,0:39:97.80:0,98,769	0/1:41,0:41:69.97:70,0,105	0/0:46,0:44:94.89:0,95,712	0/0:23,0:22:5.89:0,6,50	0/0:31,0:31:93.17:0,93,1314	0/0:38,0:38:99:0,114,1707	0/1:29,0:29:6.58:7,0,85	0/0:38,0:38:6.04:0,6,168	0/1:33,0:33:37.42:289,0,37	0/1:27,0:27:13.35:13,0,110	0/0:28,0:28:12.63:0,13,230	1/1:13,9:21:4.28:316,4,0	0/1:7,17:24:12.01:133,0,12	1/1:31,2:32:34.22:399,34,0	0/0:24,0:24:60.08:0,60,802	0/0:26,0:26:66.07:0,66,880	0/0:33,0:33:99:0,99,1425	0/0:28,0:27:2.58:0,3,141	0/0:33,0:31:50.23:0,50,432	1/1:10,28:40:33.92:790,34,0	0/0:11,0:11:29.55:0,30,210
chr10	54206750	.	T	TGAC	3062.99	PASS	AB=1.000;AC=18;AF=0.321;AN=56;BaseQRankSum=8.882;DP=809;FS=7.075;HRun=0;HaplotypeScore=184.3645;InbreedingCoeff=0.5192;MQ=52.23;MQ0=8;MQRankSum=-5.485;QD=9.40;ReadPosRankSum=3.359;VQSLOD=2.1438;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:30.15:0,30,237	1/1:0,6:6:6.02:137,6,0	0/0:22,0:15:37.25:0,37,349	0/0:17,0:15:8.50:0,9,313	0/0:38,0:38:27.29:0,27,207	0/1:24,0:24:3.46:3,0,222	0/0:33,0:33:23.58:0,24,330	0/0:35,0:34:83.84:0,84,655	0/1:39,0:39:66.53:74,0,67	0/0:47,0:44:56.80:0,57,589	0/0:22,0:21:5.87:0,6,46	0/0:29,0:29:74.69:0,75,1226	0/0:36,0:36:99:0,105,1627	0/1:27,0:27:7.23:7,0,80	0/0:38,0:38:12.05:0,12,220	1/1:2,30:32:51.17:1170,51,0	0/1:26,0:26:11.15:11,0,125	0/1:26,0:26:14.89:15,0,181	1/1:24,0:22:51.80:452,52,0	1/1:24,0:23:14.81:185,15,0	1/1:34,0:33:25.69:332,26,0	0/0:28,0:28:72.06:0,72,898	0/0:22,0:22:22.79:0,23,745	0/0:37,0:37:99:0,105,1476	0/1:24,0:23:3.25:3,0,99	0/0:35,0:33:48.69:0,49,465	1/1:40,0:40:47.88:858,48,0	0/0:11,0:11:29.51:0,30,214
chr10	54206765	.	C	CGACGAT	3819.75	PASS	AB=1.000;AC=22;AF=0.393;AN=56;BaseQRankSum=5.728;DP=762;FS=7.872;HRun=0;HaplotypeScore=224.0339;InbreedingCoeff=0.2729;MQ=57.51;MQ0=6;MQRankSum=-2.730;QD=9.27;ReadPosRankSum=-5.174;VQSLOD=0.0497;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:30:99:114,0,159	1/1:8,0:8:15:132,15,0	0/0:25,0:20:47.33:0,47,997	0/0:16,0:15:42.12:0,42,733	0/1:29,0:29:0.22:0,0,169	0/1:23,0:23:73.51:74,0,294	0/1:32,0:32:0.68:1,0,299	0/0:40,0:39:59.34:0,59,491	0/1:20,0:20:52.96:274,0,53	0/0:47,0:45:70.69:0,71,602	0/0:17,0:16:10.05:0,10,92	0/0:27,0:27:48.16:0,48,1007	0/0:32,0:32:78.20:0,78,1483	0/1:24,0:24:35.93:36,0,132	0/1:31,0:31:17.34:17,0,252	1/1:30,0:30:54.54:510,55,0	0/1:27,0:27:99:134,0,122	0/1:23,0:23:69.81:70,0,166	1/1:29,0:28:51.16:945,51,0	1/1:25,0:25:39.06:504,39,0	1/1:9,22:33:2.84:54,3,0	0/0:27,0:27:54.19:0,54,1128	0/0:24,0:24:57.08:0,57,1024	0/0:37,0:37:96.24:0,96,1916	0/1:12,0:11:45.23:45,0,80	0/0:44,0:42:53.42:0,53,448	1/1:34,1:35:51.14:910,51,0	0/0:14,0:14:33.13:0,33,233
chr10	54206936	.	T	TG	902.37	PASS	AB=0.844;AC=7;AF=0.125;AN=56;BaseQRankSum=-0.676;DP=684;FS=1.010;HRun=0;HaplotypeScore=159.1324;InbreedingCoeff=-0.1265;MQ=63.53;MQ0=5;MQRankSum=2.610;QD=5.50;ReadPosRankSum=0.326;VQSLOD=3.2919;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:83.99:0,84,831	0/0:18,0:18:52.88:0,53,578	0/0:25,0:20:57.18:0,57,759	0/0:23,0:21:59.80:0,60,753	0/0:21,0:21:53.62:0,54,273	0/0:21,0:21:30.82:0,31,232	0/0:25,0:24:64.69:0,65,316	0/1:21,0:21:1.20:1,0,166	0/0:21,0:21:13.25:0,13,216	0/0:24,0:23:31.57:0,32,239	0/0:18,0:18:49.85:0,50,239	0/0:19,0:19:54.18:0,54,754	0/0:24,0:24:72.21:0,72,942	0/0:25,0:25:66.97:0,67,330	0/0:32,0:32:52.85:0,53,357	0/0:26,0:26:69.08:0,69,750	0/0:35,0:35:93.09:0,93,1035	0/0:25,0:25:62.97:0,63,663	0/1:22,5:26:99:118,0,107	0/1:18,10:28:67.21:321,0,67	0/1:17,15:31:77.61:352,0,78	0/0:24,0:24:72.23:0,72,979	0/0:14,0:14:42.14:0,42,586	0/0:41,0:41:99:0,117,1601	0/0:25,0:23:31.64:0,32,228	0/1:30,0:29:4.69:5,0,200	0/1:10,12:22:57.75:213,0,58	0/1:4,0:4:12.54:13,0,28
chr10	54206937	.	T	TTTTG	8256.40	PASS	AB=0.679;AC=17;AF=0.304;AN=56;BaseQRankSum=-9.954;DP=693;FS=21.434;HRun=0;HaplotypeScore=177.2929;InbreedingCoeff=0.9119;MQ=63.56;MQ0=5;MQRankSum=3.710;QD=32.38;ReadPosRankSum=0.952;VQSLOD=3.4499;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,25:34:57.20:1356,57,0	1/1:8,10:19:27.09:623,27,0	0/0:25,0:20:17.99:0,18,212	0/0:23,0:21:15:0,15,207	0/0:21,0:21:32.74:0,33,271	0/0:20,0:20:35.63:0,36,307	0/0:25,0:24:29.99:0,30,262	0/0:21,0:21:14.75:0,15,119	0/0:20,0:20:39:0,39,337	0/0:24,0:23:41.96:0,42,357	0/0:19,0:19:35.99:0,36,308	0/0:19,0:19:39.12:0,39,591	0/0:24,0:24:45.14:0,45,670	0/0:25,0:25:59.40:0,59,483	0/0:32,0:32:65.80:0,66,569	1/1:13,14:29:33.11:785,33,0	0/1:20,17:38:5.25:886,0,5	1/1:10,15:26:36.12:856,36,0	1/1:22,0:26:30.05:525,30,0	1/1:17,0:28:54.10:1117,54,0	1/1:15,0:31:54.63:1221,55,0	0/0:24,0:24:45.14:0,45,684	0/0:16,0:16:24.05:0,24,333	0/0:41,0:41:84.28:0,84,1301	0/0:25,0:23:35.99:0,36,310	0/0:30,0:29:53.41:0,53,444	1/1:9,0:22:42.08:887,42,0	0/0:4,0:4:6:0,6,52
chr10	54206953	.	GT	G	6426.15	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=12.618;DP=707;FS=17.254;HRun=3;HaplotypeScore=144.6275;InbreedingCoeff=0.9918;MQ=58.51;MQ0=9;MQRankSum=2.394;QD=24.07;ReadPosRankSum=2.621;VQSLOD=3.2685;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:71.90:0,72,643	0/0:18,0:18:54.04:0,54,610	0/0:27,0:18:36.33:0,36,567	0/0:25,0:22:47.31:0,47,762	1/1:10,13:23:67.08:600,67,0	1/1:7,14:21:46.31:460,46,0	1/1:8,11:18:44.98:416,45,0	1/1:16,6:22:62.02:528,62,0	1/1:5,13:18:47.25:449,47,0	1/1:12,15:25:69.56:620,70,0	1/1:3,17:20:56.90:523,57,0	0/0:20,0:20:60.20:0,60,853	0/0:22,0:22:60.14:0,60,816	1/1:9,19:27:74.26:689,74,0	1/1:10,22:32:78.10:780,78,0	0/0:25,0:25:53.99:0,54,555	0/0:36,0:36:90.06:0,90,993	0/0:27,0:27:63.01:0,63,659	0/0:32,0:31:75.17:0,75,943	0/0:27,0:27:78.05:0,78,829	0/0:33,0:32:89.65:0,90,938	0/0:28,0:28:81.27:0,81,1153	0/0:19,0:19:48.14:0,48,664	0/0:42,0:42:99:0,120,1704	1/1:13,12:23:63.59:557,64,0	1/1:7,22:26:71.37:706,71,0	0/0:29,0:29:84.04:0,84,900	1/1:0,3:3:9.02:98,9,0
chr10	54206954	.	T	TTG	4721.44	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=12.896;DP=706;FS=20.159;HRun=0;HaplotypeScore=166.7643;InbreedingCoeff=0.9903;MQ=58.84;MQ0=9;MQRankSum=0.878;QD=17.62;ReadPosRankSum=2.586;VQSLOD=3.7724;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:64.37:0,64,396	0/0:18,0:18:50.91:0,51,513	0/0:30,0:22:48.06:0,48,639	0/0:24,0:21:18.69:0,19,805	1/1:20,3:23:50.55:631,51,0	1/1:20,1:21:37.95:343,38,0	1/1:16,2:17:44.26:330,44,0	1/1:22,2:24:42.22:367,42,0	1/1:18,1:19:37.51:312,38,0	1/1:26,2:26:29.19:398,29,0	1/1:18,2:20:52:388,52,0	0/0:20,0:20:60.20:0,60,914	0/0:21,0:21:60.15:0,60,872	1/1:26,1:26:63.40:499,63,0	1/1:31,0:31:76.71:493,77,0	0/0:26,0:26:50.29:0,50,439	0/0:35,0:35:84.91:0,85,881	0/0:26,0:26:58.66:0,59,532	0/0:32,0:31:73.55:0,74,927	0/0:27,0:27:73.50:0,73,664	0/0:32,0:31:84.51:0,85,746	0/0:28,0:28:81.28:0,81,1240	0/0:18,0:18:48.15:0,48,713	0/0:42,0:42:99:0,120,1827	1/1:21,4:23:31.11:429,31,0	1/1:29,0:26:41.69:463,42,0	0/0:29,0:29:77.14:0,77,758	1/1:3,0:3:8.79:68,9,0
chr10	54206957	.	GT	G	6268.48	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=12.623;DP=702;FS=12.545;HRun=3;HaplotypeScore=144.6155;InbreedingCoeff=0.9901;MQ=59.28;MQ0=9;MQRankSum=1.130;QD=23.57;ReadPosRankSum=2.970;VQSLOD=3.3312;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:71.92:0,72,660	0/0:18,0:18:50.97:0,51,527	0/0:30,0:23:66.22:0,66,913	0/0:24,0:21:54.02:0,54,768	1/1:10,13:23:64.51:564,65,0	1/1:7,13:20:45.32:427,45,0	1/1:6,10:15:44.16:383,44,0	1/1:18,5:23:64.91:531,65,0	1/1:6,13:19:47.25:449,47,0	1/1:15,15:28:73.14:658,73,0	1/1:2,17:19:56.85:513,57,0	0/0:21,0:21:63.21:0,63,894	0/0:20,0:20:57.19:0,57,811	1/1:7,19:26:74.26:690,74,0	1/1:8,22:30:75.55:744,76,0	0/0:26,0:26:63.02:0,63,675	0/0:35,0:35:87.02:0,87,938	0/0:26,0:26:63.01:0,63,660	0/0:30,0:29:75.18:0,75,945	0/0:28,0:28:78.07:0,78,857	0/0:34,0:33:93.04:0,93,952	0/0:29,0:29:87.28:0,87,1209	0/0:15,0:15:45.15:0,45,640	0/0:43,0:43:99:0,120,1702	1/1:13,12:23:60.71:515,61,0	1/1:11,20:28:76.57:729,77,0	0/0:27,0:27:81.03:0,81,899	1/1:1,2:3:8.05:67,8,0
chr10	54206958	.	T	TTG	8951.35	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=7.900;DP=713;FS=13.235;HRun=0;HaplotypeScore=151.8251;InbreedingCoeff=0.9901;MQ=59.75;MQ0=9;MQRankSum=-1.409;QD=32.32;ReadPosRankSum=2.773;VQSLOD=6.4541;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:64.38:0,64,419	0/0:17,0:17:47.49:0,47,412	0/0:31,0:24:66.22:0,66,975	0/0:25,0:22:54.13:0,54,846	1/1:19,5:24:66.14:758,66,0	1/1:15,5:20:47.11:574,47,0	1/1:14,3:16:47.11:492,47,0	1/1:8,15:26:76.69:1085,77,0	1/1:14,5:20:47.09:561,47,0	1/1:18,13:29:77.65:1032,78,0	1/1:20,0:20:56.25:703,56,0	0/0:22,0:22:63.21:0,63,954	0/0:21,0:21:57.19:0,57,868	1/1:21,6:26:74.96:903,75,0	1/1:24,6:30:75.18:908,75,0	0/0:27,0:27:59.40:0,59,552	0/0:35,0:35:81.86:0,82,811	0/0:26,0:26:58.66:0,59,535	0/0:28,0:27:73.26:0,73,926	0/0:26,0:27:73.90:0,74,696	0/0:33,0:32:87.91:0,88,758	0/0:29,0:29:87.28:0,87,1291	0/0:15,0:15:45.15:0,45,689	0/0:41,0:41:99:0,120,1822	1/1:21,6:26:64.58:798,65,0	1/1:23,8:28:78.20:1065,78,0	0/0:29,0:29:74.68:0,75,763	1/1:3,0:3:8.05:73,8,0
chr10	54207130	.	TA	T	3878.93	PASS	AB=0.889;AC=27;AF=0.482;AN=56;BaseQRankSum=-3.919;DP=529;FS=3.314;HRun=11;HaplotypeScore=70.9348;InbreedingCoeff=0.7496;MQ=82.90;MQ0=0;MQRankSum=-1.212;QD=14.58;ReadPosRankSum=2.786;VQSLOD=4.3460;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:2,0:33:68.71:0,69,363	0/1:9,2:11:19.22:19,0,219	0/1:16,2:16:44.22:44,0,152	0/1:19,1:21:4.26:4,0,137	1/1:1,17:20:42.99:330,43,0	1/1:0,16:16:41.95:345,42,0	1/1:3,16:19:41.94:344,42,0	1/1:6,19:25:50.88:413,51,0	1/1:5,8:13:20.97:172,21,0	1/1:4,17:21:47.92:394,48,0	1/1:1,11:13:29:228,29,0	0/0:15,0:15:8.32:0,8,277	0/0:16,2:18:8.44:0,8,295	1/1:3,14:17:9.97:288,10,0	1/1:2,22:25:52.98:425,53,0	0/0:13,0:13:30.06:0,30,312	0/0:7,0:26:52.87:0,53,284	0/0:1,0:22:28.41:0,28,142	0/0:8,0:18:34.65:0,35,195	0/0:5,0:21:48.81:0,49,261	0/0:7,0:22:43.13:0,43,259	0/0:7,1:9:2.25:0,2,201	0/0:21,1:22:17.45:0,17,384	0/0:24,0:24:66.17:0,66,704	1/1:2,18:20:22.08:387,22,0	1/1:3,15:18:44.90:362,45,0	0/0:6,0:20:29.18:0,29,194	1/1:1,6:7:14.93:123,15,0
chr10	54208195	.	A	ACT	607.78	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-0.640;DP=662;FS=2.405;HRun=0;HaplotypeScore=112.4804;InbreedingCoeff=0.9283;MQ=69.10;MQ0=12;MQRankSum=-0.857;QD=6.75;ReadPosRankSum=-3.744;VQSLOD=2.6824;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:93.62:0,94,758	0/0:10,0:10:17.91:0,18,140	0/0:37,0:21:62.94:0,63,573	0/0:44,0:24:49.79:0,50,490	0/0:13,0:12:26.96:0,27,232	0/0:20,0:20:41.92:0,42,364	0/0:27,0:27:62.66:0,63,545	0/0:32,0:31:75.34:0,75,651	0/0:19,0:19:47.21:0,47,382	0/0:24,0:23:53.61:0,54,475	0/0:11,0:11:26.89:0,27,211	0/0:28,0:27:65.85:0,66,676	0/0:24,0:24:68.91:0,69,659	0/0:14,0:14:23.89:0,24,207	0/0:21,0:20:47.88:0,48,396	0/0:21,0:21:16.15:0,16,237	0/0:22,0:22:44.87:0,45,371	0/0:21,0:21:47.72:0,48,378	1/1:20,0:20:56.51:457,57,0	1/1:1,15:17:8.92:94,9,0	1/1:9,25:34:11.24:141,11,0	0/0:14,0:14:37.80:0,38,296	0/0:13,0:13:29.86:0,30,284	0/0:48,0:48:86.55:0,87,990	0/0:18,0:18:36.01:0,36,342	0/0:35,0:35:92.84:0,93,842	1/1:1,16:18:5.04:61,5,0	0/0:14,0:14:29.91:0,30,255
chr10	54208196	.	CTG	C	328.50	PASS	AB=1.000;AC=23;AF=0.442;AN=52;BaseQRankSum=5.216;DP=695;FS=8.016;HRun=0;HaplotypeScore=107.0944;InbreedingCoeff=0.0209;MQ=67.77;MQ0=13;MQRankSum=-0.472;QD=0.83;ReadPosRankSum=0.723;VQSLOD=1.4990;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:49,0:48:16.70:79,17,0	0/0:13,0:13:8.97:0,9,71	./.	0/0:44,0:24:0:0,0,0	1/1:14,0:13:2.72:17,3,0	0/1:21,0:21:12.15:41,0,12	0/1:27,0:27:11.92:12,0,18	0/0:35,0:34:5.88:0,6,36	0/1:19,0:19:9.08:9,0,39	0/1:25,0:24:4.92:5,0,49	./.	0/1:28,0:27:10.15:10,0,244	0/1:24,0:24:57.51:91,0,58	1/1:14,0:14:2.93:18,3,0	0/1:22,0:21:6:6,0,52	0/0:23,0:23:9.02:0,9,102	1/1:22,0:22:14.20:70,14,0	1/1:23,0:23:8.52:42,9,0	0/1:23,0:23:3.50:4,0,71	0/0:17,0:17:2.79:0,3,27	0/0:37,0:36:15.03:0,15,169	0/1:15,0:15:11.61:12,0,59	0/0:13,0:13:6:0,6,68	0/0:43,5:49:9.27:0,9,410	0/1:18,0:18:23.05:23,0,29	0/1:37,0:37:10.75:11,0,136	0/0:20,0:20:3.78:0,4,30	1/1:14,0:14:5.88:35,6,0
chr10	54208238	.	GTGTGTT	G	2251.16	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=-1.556;DP=656;FS=13.389;HRun=0;HaplotypeScore=111.7916;InbreedingCoeff=-0.0617;MQ=66.76;MQ0=16;MQRankSum=-1.002;QD=6.58;ReadPosRankSum=1.178;VQSLOD=1.4983;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:5,46:49:21.03:432,21,0	0/1:12,0:12:25.34:25,0,228	0/0:30,0:17:44.11:0,44,460	0/0:42,0:25:68.16:0,68,695	0/1:17,0:16:62.53:148,0,63	0/1:19,0:19:1.76:2,0,94	0/0:19,0:19:9.90:0,10,124	0/1:27,0:26:99:431,0,101	0/0:19,0:19:15.27:0,15,206	0/1:16,0:15:99:108,0,165	0/1:8,0:8:44.22:52,0,44	0/0:31,0:30:70.02:0,70,1337	0/0:18,0:18:48.01:0,48,790	0/0:26,0:26:11.93:0,12,93	0/0:26,0:25:18.02:0,18,268	0/1:19,0:19:99:162,0,160	1/1:3,24:26:14.80:362,15,0	1/1:6,20:26:1.96:207,2,0	0/1:13,0:12:70.47:70,0,283	0/1:17,0:17:33.38:33,0,102	0/1:35,0:33:99:125,0,430	0/0:14,0:14:35.96:0,36,544	0/0:20,0:20:45.44:0,45,620	0/0:38,0:38:90.61:0,91,1686	0/0:31,0:31:20.77:0,21,262	0/1:31,0:30:99:141,0,577	0/1:17,0:17:99:115,0,118	0/1:6,0:6:6.09:6,0,45
chr10	54208240	.	GTGTT	G	2388.89	PASS	AB=0.995;AC=22;AF=0.393;AN=56;BaseQRankSum=-1.360;DP=650;FS=21.734;HRun=0;HaplotypeScore=93.4451;InbreedingCoeff=0.1397;MQ=69.12;MQ0=16;MQRankSum=-2.243;QD=7.09;ReadPosRankSum=2.322;VQSLOD=0.7877;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:50,0:48:18.06:235,18,0	0/1:12,0:12:30.91:31,0,82	0/0:33,0:20:53.11:0,53,538	0/0:42,0:25:68.16:0,68,695	1/1:17,0:16:27.89:227,28,0	0/1:19,1:20:20.80:50,0,21	0/0:19,0:19:5.14:0,5,46	0/1:27,0:26:3.21:477,0,3	0/0:19,0:19:6.38:0,6,50	0/1:15,0:14:26.07:184,0,26	1/1:9,0:9:19.76:146,20,0	0/0:28,0:27:43.66:0,44,934	0/0:20,0:20:2.83:0,3,501	0/0:24,0:24:0.87:0,1,2	0/0:27,0:26:9.72:0,10,66	0/1:18,0:18:81.95:163,0,82	1/1:26,0:25:14.66:199,15,0	1/1:25,0:24:5.70:115,6,0	0/1:14,0:13:67.87:104,0,68	0/1:16,0:16:32.87:58,0,33	0/1:35,0:33:99:154,0,192	0/0:13,0:13:15.43:0,15,397	0/0:20,0:20:47.97:0,48,540	0/0:37,0:37:90.53:0,91,1290	0/0:31,0:31:7.61:0,8,66	0/1:30,0:29:99:227,0,145	0/1:17,0:17:24.20:139,0,24	1/1:3,3:6:1.40:57,1,0
chr10	54208242	.	GTT	G	3589.32	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=-0.376;DP=625;FS=12.881;HRun=5;HaplotypeScore=72.9374;InbreedingCoeff=0.7152;MQ=72.15;MQ0=14;MQRankSum=-1.132;QD=8.39;ReadPosRankSum=2.125;VQSLOD=-0.4199;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:50,0:48:17.98:152,18,0	1/1:11,0:11:3.71:63,4,0	0/0:36,0:23:62.10:0,62,616	0/0:42,0:25:68.16:0,68,695	1/1:14,0:13:32.51:271,33,0	1/1:5,15:20:9.02:109,9,0	1/1:2,16:18:2.18:40,2,0	1/1:27,0:27:71.89:628,72,0	1/1:4,13:17:2.63:42,3,0	1/1:12,1:12:29.87:260,30,0	1/1:9,0:9:22.76:171,23,0	0/0:28,0:27:55.39:0,55,632	0/0:22,0:22:32.96:0,33,341	1/1:4,14:18:3.01:42,3,0	1/1:6,19:24:2.80:42,3,0	1/1:18,0:18:0.48:187,0,0	1/1:26,0:25:15:130,15,0	1/1:24,0:23:8.26:77,8,0	1/1:13,0:12:7.48:201,7,0	1/1:15,0:15:9.50:93,10,0	1/1:33,0:32:4.39:313,4,0	0/0:13,0:13:30.01:0,30,295	0/0:20,0:20:47.94:0,48,441	0/0:36,0:36:71.50:0,72,828	1/1:3,25:28:5.67:83,6,0	1/1:10,17:26:20.10:361,20,0	1/1:18,0:18:29.70:254,30,0	1/1:3,1:4:6.01:69,6,0
chr10	54208747	.	TTC	T	1773.02	PASS	AB=0.967;AC=20;AF=0.370;AN=54;BaseQRankSum=3.333;DP=545;FS=2.091;HRun=0;HaplotypeScore=130.2065;InbreedingCoeff=0.1885;MQ=58.48;MQ0=9;MQRankSum=0.281;QD=6.93;ReadPosRankSum=0.954;VQSLOD=3.5127;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,18:25:39.12:462,39,0	1/1:9,0:9:11.89:83,12,0	0/0:23,0:10:5.94:0,6,41	./.	0/0:25,0:25:0.91:0,1,67	0/0:21,0:21:6.57:0,7,128	0/1:11,1:12:21.73:22,0,82	0/0:33,0:32:13.49:0,13,264	0/0:27,0:27:10.09:0,10,221	0/0:29,0:29:51.21:0,51,352	0/0:29,0:28:22.10:0,22,109	0/0:16,0:16:45.05:0,45,562	0/1:6,1:7:20.49:20,0,175	0/0:14,0:14:9.05:0,9,24	0/1:19,0:19:3.19:3,0,72	1/1:26,0:26:50.23:349,50,0	1/1:2,15:17:33.06:375,33,0	1/1:17,9:26:39.01:417,39,0	0/1:15,0:12:11.55:12,0,32	0/1:22,0:22:66.29:97,0,66	0/1:11,0:11:15.92:29,0,16	0/0:21,0:21:45.11:0,45,642	0/1:15,1:16:5.46:5,0,329	0/1:12,1:13:2.46:2,0,388	0/1:23,0:23:9.02:9,0,49	0/0:25,0:25:21.25:0,21,177	0/1:15,0:15:48.05:60,0,48	0/0:11,0:11:1.25:0,1,3
chr10	54208767	.	CTCTGTGTGTG	C	2802.37	PASS	AB=0.971;AC=14;AF=0.250;AN=56;BaseQRankSum=-1.399;DP=527;FS=25.450;HRun=0;HaplotypeScore=220.5180;InbreedingCoeff=0.0231;MQ=50.34;MQ0=7;MQRankSum=-0.750;QD=10.57;ReadPosRankSum=-3.323;VQSLOD=0.8029;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:44.78:0,45,1286	1/1:0,7:7:12.04:405,12,0	0/0:19,0:7:21.02:0,21,507	0/0:13,0:7:18.06:0,18,572	0/1:33,0:33:99:111,0,250	0/1:21,0:22:56.07:56,0,302	0/1:12,0:13:99:108,0,132	0/1:29,0:27:99:275,0,382	0/1:25,0:27:28.19:28,0,464	0/1:26,0:26:55.55:56,0,522	0/1:26,0:25:45.99:46,0,233	0/0:21,0:21:60.16:0,60,2408	0/0:10,0:9:24.08:0,24,1059	0/0:14,0:13:26.17:0,26,147	0/1:13,0:14:3.86:4,0,158	1/1:2,21:23:50.35:1721,50,0	0/0:19,0:19:39.13:0,39,1119	0/0:18,0:18:4.45:0,4,983	0/0:11,0:9:26.03:0,26,386	0/0:25,0:25:47.89:0,48,1017	0/0:13,0:13:18.05:0,18,363	0/0:23,0:23:60.19:0,60,2444	0/0:17,0:17:45.14:0,45,1720	0/0:16,0:16:48.13:0,48,1869	0/1:18,0:18:61.04:61,0,208	0/1:26,0:27:95.13:95,0,414	0/0:13,0:13:30.09:0,30,627	0/0:2,0:2:2.92:0,3,17
chr10	54208769	.	CTGTGTG	C	11782.81	PASS	AB=0.639;AC=30;AF=0.536;AN=56;BaseQRankSum=0.992;DP=518;FS=0.809;HRun=0;HaplotypeScore=153.5430;InbreedingCoeff=0.8231;MQ=50.08;MQ0=7;MQRankSum=-7.194;QD=39.41;ReadPosRankSum=0.293;VQSLOD=4.3199;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:45.15:0,45,913	1/1:7,0:7:12.04:170,12,0	0/0:19,0:7:18.02:0,18,339	0/0:13,0:7:18.05:0,18,456	1/1:10,22:32:60.16:1278,60,0	1/1:9,13:22:51.16:1041,51,0	1/1:7,4:11:21.06:371,21,0	1/1:9,18:25:46.96:803,47,0	1/1:13,14:27:66.17:1275,66,0	1/1:13,14:27:66.15:1322,66,0	1/1:7,20:26:48.16:1049,48,0	0/0:20,0:20:51.18:0,51,1586	0/0:10,0:9:24.08:0,24,694	1/1:2,12:13:27.09:594,27,0	1/1:6,7:13:24.08:514,24,0	1/1:21,0:22:50.84:721,51,0	0/0:19,0:19:39.13:0,39,793	0/0:18,0:18:43.03:0,43,813	0/1:7,0:9:49.61:50,0,57	0/0:6,0:24:11.47:0,11,212	0/1:2,0:12:12.20:12,0,81	0/0:22,0:22:57.18:0,57,1687	0/0:17,0:17:42.13:0,42,1189	0/0:16,0:16:42.13:0,42,1196	1/1:4,14:18:48.16:1027,48,0	1/1:14,12:27:75.24:1491,75,0	0/0:4,0:13:17.53:0,18,141	1/1:0,2:2:3.01:66,3,0
chr10	54208822	.	GAGAGGA	G	2221.21	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=2.185;DP=543;FS=0.000;HRun=0;HaplotypeScore=181.7273;InbreedingCoeff=0.8996;MQ=64.04;MQ0=9;MQRankSum=-5.550;QD=33.65;ReadPosRankSum=-0.860;VQSLOD=3.3047;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:13,12:25:48.16:969,48,0	0/0:5,0:5:9.03:0,9,193	0/0:41,0:19:7.93:0,8,804	0/0:67,0:29:4.31:0,4,668	0/0:22,0:22:41.97:0,42,1124	0/0:16,0:16:36.09:0,36,1158	0/0:11,0:11:27.09:0,27,852	0/0:19,0:19:36.11:0,36,937	0/0:23,0:23:60.21:0,60,1837	0/0:25,0:25:66.20:0,66,1987	0/0:18,0:18:24:0,24,665	0/0:16,0:16:45.15:0,45,1385	0/0:13,0:13:36.12:0,36,1231	0/0:10,0:10:27.05:0,27,718	0/0:15,0:15:39.09:0,39,964	0/0:19,0:19:51.10:0,51,1396	1/1:9,9:18:36.04:709,36,0	1/1:3,20:23:30.10:685,30,0	0/0:13,0:12:30.10:0,30,870	0/0:13,0:13:30.10:0,30,920	0/0:10,0:10:17.99:0,18,517	0/0:21,0:21:57.20:0,57,1898	0/0:18,0:18:54.18:0,54,1613	0/0:15,0:15:30.10:0,30,965	0/0:24,0:24:57.07:0,57,1512	0/0:27,0:27:57.20:0,57,1773	0/0:10,0:10:24.05:0,24,739	0/0:5,0:5:15.05:0,15,494
chr10	54208826	.	GGA	G	544.79	PASS	AB=0.962;AC=6;AF=0.107;AN=56;BaseQRankSum=6.582;DP=532;FS=1.296;HRun=0;HaplotypeScore=149.2171;InbreedingCoeff=0.6541;MQ=65.56;MQ0=10;MQRankSum=-5.101;QD=4.07;ReadPosRankSum=-0.104;VQSLOD=3.0800;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:22,2:24:3.52:233,0,4	0/0:4,0:4:12.04:0,12,218	0/0:45,0:20:5.63:0,6,523	0/1:71,0:29:20.03:20,0,472	0/0:23,0:23:45.15:0,45,795	0/0:16,0:16:42.14:0,42,777	0/0:11,0:11:30.06:0,30,567	0/0:14,0:14:39.13:0,39,710	0/0:24,0:24:67.67:0,68,1216	0/0:25,0:25:23.33:0,23,1259	0/0:17,0:17:36.10:0,36,568	0/0:16,0:16:48.13:0,48,904	0/0:13,0:13:36.12:0,36,728	0/0:10,0:10:30.10:0,30,556	0/0:14,1:15:42.13:0,42,735	0/0:19,0:19:51.17:0,51,971	1/1:16,1:17:22.87:268,23,0	1/1:20,0:20:29.03:159,29,0	0/0:11,0:11:30.10:0,30,576	0/0:11,0:11:33.11:0,33,626	0/0:9,0:9:17.99:0,18,322	0/0:20,0:20:57.20:0,57,1145	0/0:18,0:18:42.97:0,43,934	0/0:11,0:11:30.10:0,30,606	0/0:23,0:23:60.19:0,60,1084	0/0:25,0:25:66.22:0,66,1279	0/0:12,0:12:30.09:0,30,525	0/0:5,0:5:15.05:0,15,270
chr10	54208827	.	GA	G	286.23	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=6.837;DP=524;FS=1.360;HRun=2;HaplotypeScore=140.4531;InbreedingCoeff=0.9146;MQ=65.95;MQ0=10;MQRankSum=-4.807;QD=4.69;ReadPosRankSum=-0.944;VQSLOD=0.1414;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:19,4:23:36.37:208,36,0	0/0:4,0:4:9.03:0,9,134	0/0:44,1:20:33.32:0,33,471	0/0:72,1:29:3.23:0,3,390	0/0:22,0:22:44.98:0,45,568	0/0:15,0:15:36.09:0,36,513	0/0:12,0:12:27.09:0,27,403	0/0:13,0:13:36.11:0,36,520	0/0:24,0:24:50.74:0,51,905	0/0:24,0:24:61.01:0,61,972	0/0:16,0:16:24:0,24,310	0/0:16,0:16:48.12:0,48,691	0/0:12,0:12:36.12:0,36,536	0/0:10,0:10:30:0,30,394	0/0:16,0:16:42.09:0,42,559	0/0:19,0:19:51.09:0,51,698	1/1:17,1:18:26.24:126,26,0	1/1:20,0:20:25.05:95,25,0	0/0:11,0:10:30.10:0,30,444	0/0:11,0:11:30.10:0,30,443	0/0:10,0:10:20.99:0,21,267	0/0:19,0:19:57.19:0,57,849	0/0:18,0:18:54.18:0,54,778	0/0:11,0:11:30.10:0,30,448	0/0:21,0:21:57.06:0,57,765	0/0:23,0:23:60.20:0,60,898	0/0:11,0:11:30.07:0,30,420	0/0:5,0:5:15.05:0,15,224
chr10	54208839	.	GA	G	1050.49	PASS	AB=0.967;AC=23;AF=0.411;AN=56;BaseQRankSum=2.801;DP=510;FS=6.845;HRun=1;HaplotypeScore=115.7268;InbreedingCoeff=0.6092;MQ=64.75;MQ0=12;MQRankSum=0.882;QD=5.36;ReadPosRankSum=4.558;VQSLOD=0.6280;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:20:42.13:0,42,560	1/1:3,0:3:2.74:12,3,0	0/0:49,0:18:34.41:0,34,393	0/0:79,2:25:27.49:0,27,363	0/1:18,0:18:13.06:69,0,13	0/1:15,1:15:5.84:101,0,6	1/1:11,0:11:21.61:97,22,0	0/1:14,0:12:20.11:49,0,20	1/1:21,0:21:23.88:158,24,0	0/1:23,1:23:20.98:119,0,21	1/1:11,0:11:17.27:67,17,0	0/0:15,0:15:45.05:0,45,599	0/0:13,0:13:25.58:0,26,431	1/1:7,1:8:19.32:108,19,0	1/1:15,0:14:27.13:103,27,0	0/1:13,1:14:57.25:100,0,57	0/0:18,0:18:42.08:0,42,530	0/0:22,0:22:36.08:0,36,478	0/0:9,0:9:27.09:0,27,394	0/0:11,0:11:21:0,21,262	0/0:12,0:11:15.03:0,15,198	0/0:18,0:18:53.75:0,54,728	0/0:17,0:16:48.14:0,48,670	0/0:15,0:15:33.08:0,33,459	1/1:17,0:17:14.16:104,14,0	1/1:19,0:17:13.16:84,13,0	0/0:12,0:12:23.78:0,24,296	1/1:4,1:5:13.79:86,14,0
chr10	54208840	.	AG	A	4600.58	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=0.594;DP=508;FS=5.479;HRun=5;HaplotypeScore=101.3681;InbreedingCoeff=0.9012;MQ=64.72;MQ0=13;MQRankSum=0.745;QD=23.84;ReadPosRankSum=3.100;VQSLOD=3.7157;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:20:45.08:0,45,544	1/1:0,3:3:3.01:34,3,0	0/0:48,0:18:16.28:0,16,319	0/0:79,2:25:25.58:0,26,269	1/1:4,14:18:0.15:338,0,0	1/1:3,13:15:36.07:406,36,0	1/1:3,8:11:24.04:272,24,0	1/1:4,11:13:27.07:304,27,0	1/1:6,15:21:43.91:508,44,0	1/1:4,20:23:54.15:610,54,0	1/1:2,9:11:21.06:238,21,0	0/0:16,0:16:39.12:0,39,519	0/0:12,1:13:2.07:0,2,396	1/1:2,6:8:21.06:237,21,0	1/1:3,11:13:30.08:336,30,0	1/1:7,7:14:24.06:268,24,0	0/0:18,0:18:41.08:0,41,483	0/0:22,0:22:35.90:0,36,441	0/0:10,0:9:27.09:0,27,369	0/0:11,0:11:15.05:0,15,205	0/0:11,0:10:15.04:0,15,189	0/0:18,0:18:48.16:0,48,656	0/0:17,0:16:45.15:0,45,608	0/0:15,0:15:39.10:0,39,482	1/1:3,12:15:33.09:374,33,0	1/1:2,16:16:45.13:510,45,0	0/0:11,0:11:15.37:0,15,225	1/1:1,4:5:15.04:166,15,0
chr10	54208845	.	GA	G	1164.83	PASS	AB=0.895;AC=28;AF=0.500;AN=56;BaseQRankSum=3.801;DP=488;FS=6.871;HRun=1;HaplotypeScore=102.5981;InbreedingCoeff=0.7637;MQ=62.54;MQ0=17;MQRankSum=1.358;QD=5.97;ReadPosRankSum=3.277;VQSLOD=0.7784;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:21:45.42:0,45,555	1/1:3,0:3:2.60:10,3,0	0/0:44,0:16:2.72:0,3,315	0/0:72,0:21:26.43:0,26,285	1/1:16,0:16:10.73:91,11,0	1/1:16,0:15:22.44:134,22,0	1/1:13,2:15:18.79:99,19,0	1/1:14,0:11:4.34:60,4,0	1/1:19,0:19:9.82:161,10,0	1/1:21,0:20:38.58:139,39,0	1/1:10,0:10:18.08:73,18,0	0/0:17,0:17:47.95:0,48,631	0/0:13,0:12:26.53:0,27,451	1/1:8,0:8:19.84:108,20,0	0/1:16,1:16:10.08:102,0,10	1/1:9,0:8:21.16:103,21,0	0/0:18,0:18:41.08:0,41,513	0/0:24,0:24:38.88:0,39,511	0/0:12,0:9:27.09:0,27,410	0/0:9,0:9:15.04:0,15,224	0/0:10,0:8:15.05:0,15,220	0/0:16,0:16:48.16:0,48,730	0/0:17,0:15:45.15:0,45,684	0/0:17,0:17:39.07:0,39,523	1/1:13,0:13:10:95,10,0	1/1:18,0:16:17.37:111,17,0	0/1:9,2:11:37.83:38,0,194	1/1:5,0:5:13.31:56,13,0
chr10	54208857	.	G	GGA	1423.99	PASS	AB=0.948;AC=27;AF=0.540;AN=50;BaseQRankSum=0.089;DP=475;FS=22.445;HRun=0;HaplotypeScore=100.3247;InbreedingCoeff=0.5204;MQ=54.49;MQ0=18;MQRankSum=-1.090;QD=5.81;ReadPosRankSum=-2.123;VQSLOD=1.1980;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:17:15.04:0,15,160	1/1:8,0:8:8.96:69,9,0	./.	./.	0/0:10,0:10:3.01:0,3,33	0/1:14,2:16:1.48:117,0,1	1/1:17,0:17:15.62:133,16,0	1/1:29,0:26:16.53:102,17,0	1/1:14,4:18:15.01:199,15,0	0/1:23,0:22:24.11:38,0,24	0/1:9,0:9:0:0,0,0	0/0:16,0:16:18.05:0,18,195	0/0:14,0:13:5.16:0,5,64	0/1:11,1:12:13.73:39,0,14	1/1:18,0:19:18:201,18,0	1/1:15,0:14:14.90:112,15,0	0/0:15,0:15:12.03:0,12,131	0/0:19,0:19:18.04:0,18,191	1/1:12,0:9:10.20:72,10,0	1/1:5,0:5:2.96:19,3,0	1/1:14,1:13:15:161,15,0	0/0:17,0:17:5.96:0,6,51	0/0:16,0:14:2.90:0,3,16	0/0:13,0:18:26.40:0,26,213	0/1:11,1:12:35.82:36,0,56	1/1:19,0:17:9.02:98,9,0	1/1:13,0:14:20.94:205,21,0	./.
chr10	54209309	.	T	TGT	743.40	PASS	AB=1.000;AC=36;AF=0.750;AN=48;BaseQRankSum=2.224;DP=699;FS=26.022;HRun=0;HaplotypeScore=104.9370;InbreedingCoeff=0.4512;MQ=58.29;MQ0=31;MQRankSum=-1.551;QD=1.62;ReadPosRankSum=0.841;VQSLOD=0.4407;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:44,0:43:2.03:6,2,0	./.	./.	./.	0/1:28,0:28:0:0,0,0	1/1:20,0:20:3:28,3,0	1/1:29,0:28:2.99:23,3,0	1/1:30,0:30:2.49:6,2,0	1/1:27,0:26:11.86:115,12,0	1/1:31,0:29:13.26:129,13,0	1/1:18,0:18:8.97:71,9,0	0/1:33,0:33:29.15:29,0,99	0/0:25,0:25:26.21:0,26,231	1/1:19,0:19:3:26,3,0	1/1:20,0:20:3:28,3,0	1/1:27,0:25:9:78,9,0	0/0:17,4:22:1.72:0,2,5	1/1:19,0:19:7.97:40,8,0	1/1:14,0:14:3.01:40,3,0	1/1:15,0:14:2.94:18,3,0	1/1:27,0:26:2.86:25,3,0	0/0:16,0:16:12.02:0,12,121	0/0:20,0:20:6.01:0,6,64	0/0:44,0:44:25.02:0,25,219	1/1:17,0:17:9.01:92,9,0	1/1:26,0:25:11.12:80,11,0	1/1:16,0:15:6.45:53,6,0	./.
chr10	54210279	.	TGCGTGC	T	7438.34	PASS	AB=0.912;AC=42;AF=0.750;AN=56;BaseQRankSum=-4.478;DP=519;FS=17.110;HRun=0;HaplotypeScore=178.4384;InbreedingCoeff=-0.0081;MQ=42.73;MQ0=21;MQRankSum=-0.543;QD=15.66;ReadPosRankSum=-4.577;VQSLOD=2.2310;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:31:52.81:53,0,129	1/1:1,3:4:9.03:157,9,0	0/0:23,0:3:4.56:0,5,31	0/1:28,0:4:20.81:21,0,121	1/1:0,17:17:3.01:56,3,0	1/1:16,2:17:17.89:286,18,0	1/1:11,1:12:8:156,8,0	1/1:2,19:21:57.10:745,57,0	1/1:7,9:16:33.09:534,33,0	1/1:2,20:22:51.07:780,51,0	1/1:0,13:13:6.02:102,6,0	0/0:1,0:21:2.74:0,3,12	0/1:13,0:14:4.77:295,0,5	1/1:9,6:15:12.04:214,12,0	1/1:27,8:35:54.18:932,54,0	1/1:8,5:13:21.04:311,21,0	0/1:20,0:20:77.59:206,0,78	0/1:16,0:15:70.38:265,0,70	0/1:18,0:15:0.27:230,0,0	1/1:14,0:14:18.03:249,18,0	0/1:24,0:26:69.78:326,0,70	0/1:13,0:13:99:129,0,104	0/1:0,0:14:0:1,0,0	1/1:30,0:38:29.68:474,30,0	1/1:7,2:9:12.04:211,12,0	1/1:1,18:18:33.09:523,33,0	0/1:19,0:20:99:150,0,127	1/1:2,0:2:3.01:33,3,0
chr10	54210297	.	TGTGTGC	T	3764.93	PASS	AB=0.995;AC=40;AF=0.714;AN=56;BaseQRankSum=2.015;DP=471;FS=71.947;HRun=0;HaplotypeScore=188.9661;InbreedingCoeff=-0.1420;MQ=44.31;MQ0=15;MQRankSum=-0.836;QD=8.58;ReadPosRankSum=1.490;VQSLOD=-0.0810;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:38,0:36:27.13:27,0,244	1/1:6,0:6:8.50:169,8,0	0/1:24,0:7:69.13:69,0,74	0/1:21,0:6:43.73:44,0,173	1/1:14,1:15:3.01:55,3,0	0/1:14,1:15:7.19:143,0,7	1/1:6,1:7:8.73:103,9,0	1/1:20,0:20:7.19:172,7,0	1/1:13,6:19:17.42:495,17,0	1/1:18,0:18:11.02:306,11,0	1/1:9,3:12:6.02:98,6,0	0/0:20,0:20:3:0,3,28	0/1:13,0:12:52.53:53,0,89	1/1:4,6:10:12.04:190,12,0	1/1:34,0:34:36.55:651,37,0	1/1:10,0:10:18.52:309,19,0	0/1:17,0:17:47.39:47,0,191	0/0:12,0:11:1.87:0,2,216	0/1:14,0:11:36.92:37,0,103	1/1:10,0:10:8.77:75,9,0	0/1:23,0:22:11.92:12,0,316	0/1:15,0:14:22.77:23,0,272	0/1:11,0:11:0:0,0,0	0/1:38,0:37:83.92:84,0,148	1/1:6,2:8:15.01:210,15,0	1/1:16,3:19:27.40:341,27,0	0/1:21,0:21:38.94:39,0,259	1/1:1,0:1:2.84:14,3,0
chr10	54210716	.	TTCTC	T	5998.74	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=1.952;DP=519;FS=12.497;HRun=0;HaplotypeScore=109.5611;InbreedingCoeff=0.9626;MQ=76.72;MQ0=12;MQRankSum=-5.568;QD=36.58;ReadPosRankSum=0.179;VQSLOD=4.3366;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:21:48.16:0,48,778	0/0:5,0:5:12.04:0,12,302	0/0:50,0:27:35.39:0,35,610	0/0:71,0:41:4.14:0,4,672	1/1:3,11:14:36.12:618,36,0	1/1:3,11:14:33.11:544,33,0	1/1:5,9:15:27.09:437,27,0	1/1:3,20:22:54.15:812,54,0	1/1:6,14:19:45.15:725,45,0	1/1:6,11:17:39.13:670,39,0	1/1:0,8:8:15.05:257,15,0	0/0:21,0:21:56.96:0,57,1270	0/0:12,0:12:18.06:0,18,453	1/1:3,2:6:15.04:233,15,0	1/1:10,6:16:39.13:622,39,0	0/0:12,0:11:33.11:0,33,830	0/0:11,0:24:48.15:0,48,807	0/0:8,0:23:48.13:0,48,847	0/0:10,0:10:18.05:0,18,345	0/0:12,0:11:21.07:0,21,528	0/0:20,0:20:39.12:0,39,849	0/0:9,0:10:26.88:0,27,613	0/0:17,0:17:39.12:0,39,899	0/0:31,0:31:75.71:0,76,1781	1/1:1,11:12:21.07:360,21,0	1/1:7,8:15:30.10:515,30,0	0/0:12,0:12:24.08:0,24,604	1/1:0,4:4:12.04:206,12,0
chr10	54210719	.	TC	T	864.51	PASS	AB=0.986;AC=16;AF=0.286;AN=56;BaseQRankSum=10.881;DP=520;FS=6.274;HRun=1;HaplotypeScore=103.4280;InbreedingCoeff=0.3235;MQ=74.96;MQ0=14;MQRankSum=-4.722;QD=5.27;ReadPosRankSum=1.885;VQSLOD=0.5589;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:21:47.98:0,48,490	0/0:5,0:5:15.05:0,15,230	0/0:51,0:26:66.16:0,66,837	0/0:74,0:42:69.06:0,69,1030	0/1:15,0:15:10.90:40,0,11	0/1:14,0:14:82.01:91,0,82	0/1:17,0:17:19.81:128,0,20	0/1:23,0:21:22.55:157,0,23	1/1:18,1:18:33.87:218,34,0	0/1:17,0:17:36.86:37,0,79	1/1:8,0:8:9.08:23,9,0	0/0:21,0:21:58.08:0,58,884	0/0:14,0:14:39.13:0,39,552	1/1:4,2:6:10.52:64,11,0	0/1:14,2:16:0.42:210,0,0	0/0:12,0:11:33.11:0,33,527	0/0:24,0:23:63.02:0,63,621	0/0:24,0:23:54.05:0,54,580	0/0:9,0:9:24.08:0,24,353	0/0:12,0:11:30.08:0,30,435	0/0:21,0:21:45.15:0,45,688	0/0:10,0:10:27.98:0,28,424	0/0:15,0:15:45.12:0,45,661	0/0:31,0:31:90.30:0,90,1379	0/1:12,0:12:16.24:16,0,22	0/1:13,0:13:38.53:39,0,48	0/0:11,0:11:27.09:0,27,421	1/1:4,0:4:7.27:18,7,0
chr10	54210737	.	C	CCT	1080.66	PASS	AB=0.843;AC=8;AF=0.143;AN=56;BaseQRankSum=-4.911;DP=516;FS=5.688;HRun=0;HaplotypeScore=118.7881;InbreedingCoeff=0.6871;MQ=68.55;MQ0=19;MQRankSum=2.235;QD=9.16;ReadPosRankSum=0.966;VQSLOD=3.2601;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:31:62.50:0,63,651	0/0:4,0:4:12.04:0,12,149	0/0:44,0:19:25.89:0,26,294	0/1:70,0:38:51.55:52,0,244	0/0:15,0:15:36.06:0,36,417	0/0:13,0:13:39.12:0,39,483	0/0:19,0:20:53.91:0,54,599	0/0:34,0:32:57.17:0,57,696	0/0:19,1:19:48.04:0,48,529	0/0:14,0:14:39.11:0,39,476	0/0:9,0:9:17.96:0,18,176	0/0:19,0:19:45.13:0,45,547	0/0:12,0:12:33.10:0,33,409	0/0:6,0:6:18.06:0,18,223	0/0:16,0:16:36.11:0,36,436	0/0:12,0:11:33.10:0,33,399	0/0:23,0:22:51.03:0,51,531	0/0:25,0:24:37.32:0,37,482	0/1:4,3:7:22.20:151,0,22	1/1:2,9:10:24.08:392,24,0	1/1:5,12:17:24.08:393,24,0	0/0:9,0:9:27.07:0,27,322	0/0:12,0:12:24.01:0,24,297	0/0:30,0:30:66.20:0,66,818	0/0:12,0:12:24.08:0,24,297	0/0:11,0:11:27.08:0,27,334	1/1:5,7:12:15.05:246,15,0	0/0:5,0:5:15.05:0,15,186
chr10	54210811	.	T	TACACACAC	10686.85	PASS	AB=0.800;AC=33;AF=0.589;AN=56;BaseQRankSum=-3.398;DP=585;FS=0.000;HRun=0;HaplotypeScore=151.8260;InbreedingCoeff=0.8506;MQ=54.93;MQ0=8;MQRankSum=-11.710;QD=31.62;ReadPosRankSum=-0.512;VQSLOD=4.3789;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:21,17:43:31.05:1188,31,0	1/1:7,0:7:9.03:226,9,0	0/0:37,0:18:26.89:0,27,517	0/0:37,0:27:32.06:0,32,474	1/1:5,8:16:12.04:439,12,0	1/1:3,7:12:15.05:612,15,0	1/1:15,2:17:12.04:448,12,0	1/1:29,0:27:23.99:353,24,0	1/1:11,14:28:24.55:1000,25,0	1/1:12,7:20:12.36:255,12,0	1/1:5,3:9:9.03:314,9,0	0/0:26,0:26:55.18:0,55,1314	0/0:22,0:23:48.01:0,48,1012	1/1:7,11:21:30.10:1189,30,0	1/1:6,16:26:36.12:1439,36,0	1/1:16,0:15:24.08:450,24,0	1/1:8,14:28:21.07:813,21,0	1/1:17,3:20:30.01:788,30,0	0/0:12,0:9:4:0,4,230	0/0:16,0:16:36.11:0,36,831	0/0:35,0:36:89.90:0,90,1739	0/0:11,0:12:27.05:0,27,518	0/0:2,0:2:6:0,6,101	0/0:29,0:29:72.19:0,72,1627	1/1:6,4:9:12.03:400,12,0	0/1:21,4:27:15.28:435,0,15	0/0:17,0:17:48.11:0,48,1044	1/1:5,2:7:12.02:339,12,0
chr10	54210831	.	C	CACACAG	7670.90	PASS	AB=1.000;AC=20;AF=0.357;AN=56;BaseQRankSum=12.109;DP=595;FS=16.102;HRun=0;HaplotypeScore=160.5175;InbreedingCoeff=-0.0991;MQ=67.40;MQ0=7;MQRankSum=-14.571;QD=22.43;ReadPosRankSum=2.268;VQSLOD=3.8851;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:35,0:35:51.08:650,0,51	1/1:0,6:8:9.03:305,9,0	0/0:35,0:23:65.75:0,66,912	0/0:35,0:28:47.35:0,47,873	1/1:12,0:12:12.04:271,12,0	0/1:11,0:11:28.76:273,0,29	0/1:19,0:19:77.16:134,0,77	0/1:29,0:27:99:307,0,219	0/1:29,0:29:73.57:451,0,74	0/1:21,0:21:99:424,0,157	0/1:9,0:9:11.89:193,0,12	0/0:29,0:29:83.98:0,84,1552	0/0:21,0:21:57.10:0,57,1136	0/1:20,0:20:45.59:729,0,46	0/1:24,0:24:64.50:700,0,64	1/1:3,22:26:33.04:1049,33,0	0/1:35,0:34:99:338,0,174	0/1:19,0:19:66.13:539,0,66	0/0:14,0:12:30.21:0,30,388	0/0:13,0:13:36.12:0,36,815	0/0:37,0:37:99:0,102,1910	0/0:13,0:13:36.03:0,36,565	0/0:2,0:2:6:0,6,97	0/0:31,0:31:87.20:0,87,1753	0/1:9,0:8:32.34:171,0,32	0/1:29,0:28:95.57:913,0,96	0/0:23,0:23:63.10:0,63,1193	0/1:6,0:6:8.91:225,0,9
chr10	54211940	.	C	CA	926.70	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-1.164;DP=632;FS=1.095;HRun=11;HaplotypeScore=70.3526;InbreedingCoeff=0.8535;MQ=78.22;MQ0=1;MQRankSum=-0.616;QD=12.36;ReadPosRankSum=1.398;VQSLOD=3.5994;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,24:30:45.90:647,46,0	0/0:14,1:15:8.39:0,8,244	0/0:21,0:20:23.77:0,24,165	0/0:17,0:16:3.76:0,4,82	0/0:30,1:34:43.21:0,43,502	0/0:25,0:27:60.81:0,61,453	0/0:24,1:25:26.31:0,26,385	0/0:24,0:24:59.72:0,60,460	0/0:25,1:26:23.29:0,23,361	0/0:23,0:23:37.84:0,38,281	0/0:21,1:22:14.34:0,14,288	0/0:16,0:17:31.86:0,32,236	0/0:17,0:17:22.10:0,22,182	0/0:26,0:26:55.80:0,56,424	0/0:26,0:26:53.74:0,54,415	0/0:20,0:20:14.37:0,14,232	1/1:7,5:28:43.11:263,43,0	1/1:4,1:17:28.57:159,29,0	0/0:18,0:19:31.85:0,32,238	0/0:27,1:29:64.74:0,65,493	0/0:13,0:13:35.85:0,36,276	0/0:21,0:21:39.70:0,40,304	0/0:23,1:25:37.35:0,37,463	0/0:28,0:29:64.76:0,65,493	0/0:20,1:21:23.33:0,23,364	0/0:24,0:24:47.78:0,48,371	0/0:22,1:24:28.28:0,28,386	0/0:11,1:12:2.43:0,2,202
chr10	54212505	.	GGAAGAGTT	G	5511.14	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=13.548;DP=768;FS=8.450;HRun=0;HaplotypeScore=191.9232;InbreedingCoeff=0.9954;MQ=89.75;MQ0=0;MQRankSum=-10.233;QD=52.49;ReadPosRankSum=-0.543;VQSLOD=3.8103;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:59,0:59:99:0,160,6328	0/0:8,0:8:18.06:0,18,783	0/0:37,0:38:84.97:0,85,3879	0/0:25,0:25:65.03:0,65,2329	0/0:24,0:24:72.25:0,72,2989	0/0:20,0:20:51.18:0,51,2190	0/0:24,0:24:72.25:0,72,2999	0/0:26,0:26:60.20:0,60,2223	0/0:26,0:26:72.25:0,72,2983	0/0:36,0:36:99:0,99,4142	0/0:23,0:23:69.24:0,69,2905	0/0:23,0:23:69.24:0,69,2740	0/0:27,0:27:72.25:0,72,2899	0/0:25,0:25:72.25:0,72,3055	0/0:56,0:56:99:0,151,6342	0/0:35,0:35:96.33:0,96,3994	0/0:34,0:33:96.33:0,96,4074	0/0:26,0:26:66.23:0,66,2557	1/1:5,18:23:54.05:986,54,0	1/1:1,24:25:60.16:1546,60,0	1/1:4,16:20:30.10:764,30,0	0/0:32,0:32:84.29:0,84,3466	0/0:23,0:23:63.22:0,63,2650	0/0:22,0:22:60.21:0,60,2530	0/0:16,0:16:45.15:0,45,1824	0/0:29,0:29:84.29:0,84,3393	1/1:6,31:37:81.04:2215,81,0	0/0:6,0:6:18.06:0,18,783
chr10	54215468	.	A	AG	6585.92	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=8.259;DP=582;FS=1.228;HRun=9;HaplotypeScore=89.7045;InbreedingCoeff=0.9944;MQ=77.88;MQ0=0;MQRankSum=-2.016;QD=15.83;ReadPosRankSum=0.342;VQSLOD=4.9925;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,0:18:20.16:117,20,0	0/0:5,0:5:15:0,15,130	0/0:17,0:17:20.28:0,20,154	0/0:15,0:15:20.28:0,20,152	1/1:20,0:20:50.25:329,50,0	1/1:19,0:19:47.14:291,47,0	1/1:25,0:25:59.05:388,59,0	1/1:34,0:34:77.78:415,78,0	1/1:26,0:26:74.05:508,74,0	1/1:17,0:17:42.59:225,43,0	1/1:18,0:18:44.43:306,44,0	0/0:23,1:25:34.83:0,35,517	0/0:17,0:17:44.98:0,45,391	1/1:31,0:31:79.89:548,80,0	1/1:36,0:36:94.44:619,94,0	0/0:27,0:27:48.99:0,49,530	1/1:5,1:15:25.68:133,26,0	1/1:5,0:16:23.02:130,23,0	1/1:10,11:22:37.02:387,37,0	1/1:9,12:21:36.02:371,36,0	1/1:6,12:18:36.09:390,36,0	0/0:24,0:24:56.97:0,57,495	0/0:14,0:14:29.96:0,30,258	0/0:22,0:22:56.98:0,57,493	1/1:17,0:17:49.82:294,50,0	1/1:27,0:27:69.26:383,69,0	1/1:6,16:22:45.12:498,45,0	1/1:14,0:14:41.24:254,41,0
chr10	54215475	.	G	GA	10996.54	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=-12.279;DP=568;FS=1.465;HRun=0;HaplotypeScore=64.2765;InbreedingCoeff=0.7839;MQ=73.27;MQ0=0;MQRankSum=-0.245;QD=30.13;ReadPosRankSum=4.660;VQSLOD=5.0005;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:39.27:0,39,281	0/0:7,0:7:21.04:0,21,259	0/0:13,0:13:35.74:0,36,376	0/0:12,0:12:26.61:0,27,294	1/1:0,20:20:51.16:727,51,0	1/1:0,19:19:48.16:686,48,0	1/1:0,28:28:60.20:856,60,0	1/1:1,33:34:96.27:1285,96,0	1/1:0,27:27:75.25:1063,75,0	1/1:0,16:16:48.11:659,48,0	1/1:0,18:18:45.15:639,45,0	0/0:26,0:26:61.95:0,62,870	0/0:18,0:18:51.15:0,51,675	1/1:1,32:33:81.26:1150,81,0	1/1:0,38:39:96.19:1365,96,0	0/0:23,1:24:29.31:0,29,888	0/0:14,0:14:29.08:0,29,169	0/0:14,0:14:27.76:0,28,158	0/1:20,0:20:19.69:20,0,122	0/1:17,0:17:16.95:47,0,17	0/1:17,0:17:36.85:37,0,93	0/0:21,0:21:63.19:0,63,848	0/0:14,0:14:39.08:0,39,490	0/0:21,0:21:63.13:0,63,836	1/1:1,19:20:51.17:729,51,0	1/1:0,25:25:74.99:1038,75,0	1/1:18,0:18:14.09:96,14,0	1/1:0,14:14:42.14:600,42,0
chr10	54217817	.	ATG	A	89.42	PASS	AB=0.944;AC=11;AF=0.344;AN=32;BaseQRankSum=2.801;DP=650;FS=10.546;HRun=0;HaplotypeScore=132.0206;InbreedingCoeff=0.4887;MQ=59.27;MQ0=11;MQRankSum=0.865;QD=0.69;ReadPosRankSum=1.278;VQSLOD=1.9199;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:39:0.30:0,0,0	./.	./.	./.	./.	./.	./.	./.	1/1:17,0:19:2.84:14,3,0	1/1:16,0:17:2.84:14,3,0	./.	0/0:18,0:18:9.01:0,9,103	0/0:20,0:20:3.01:0,3,35	1/1:16,0:17:2.84:14,3,0	./.	0/1:16,1:17:22.55:23,0,78	1/1:32,6:39:5.86:47,6,0	1/1:18,3:20:9.02:95,9,0	0/0:25,0:25:6.02:0,6,77	0/0:20,0:20:15.50:0,16,173	0/0:52,0:52:29.96:0,30,279	0/0:16,0:16:15.02:0,15,173	0/0:11,0:11:2.80:0,3,13	0/0:50,0:48:21.06:0,21,287	./.	./.	0/0:16,0:16:9.01:0,9,103	./.
chr10	54218840	.	G	GC	17893.74	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=2.537;DP=718;FS=0.278;HRun=1;HaplotypeScore=86.7355;InbreedingCoeff=0.9976;MQ=91.04;MQ0=0;MQRankSum=-4.316;QD=42.60;ReadPosRankSum=3.109;VQSLOD=4.8736;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,37:37:99:1528,102,0	1/1:0,12:12:33.11:494,33,0	0/0:33,0:34:84.19:0,84,1032	0/0:24,0:24:69.17:0,69,849	1/1:0,25:25:72.24:1068,72,0	1/1:0,26:26:78.26:1167,78,0	1/1:1,16:17:48.16:719,48,0	1/1:1,22:23:69.19:991,69,0	1/1:0,21:21:57.19:854,57,0	1/1:0,23:23:69.23:1034,69,0	1/1:0,18:19:54.17:784,54,0	0/0:25,1:26:30.27:0,30,878	0/0:34,0:34:96.30:0,96,1232	1/1:0,32:32:90.30:1348,90,0	1/1:0,32:32:96.33:1439,96,0	1/1:1,27:28:78.26:1168,78,0	1/1:0,41:41:99:1663,111,0	1/1:1,29:30:81.27:1212,81,0	0/0:26,0:26:72.19:0,72,890	0/0:24,0:24:69.22:0,69,895	0/0:39,0:39:99:0,117,1503	0/0:27,0:27:78.25:0,78,1013	0/0:22,0:22:66.21:0,66,855	0/0:22,0:22:63.20:0,63,818	1/1:0,17:17:51.17:764,51,0	1/1:0,32:32:96.33:1435,96,0	0/0:20,0:20:57.16:0,57,712	1/1:0,5:5:15.05:225,15,0
chr10	54219349	.	AT	A	11723.92	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=11.263;DP=743;FS=3.484;HRun=2;HaplotypeScore=92.4909;InbreedingCoeff=0.9957;MQ=75.19;MQ0=0;MQRankSum=-0.137;QD=35.96;ReadPosRankSum=2.167;VQSLOD=5.3554;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,147,2155	1/1:0,12:12:33.11:429,33,0	0/0:20,0:19:54.18:0,54,785	0/0:19,0:19:53.02:0,53,708	1/1:0,24:24:66.21:857,66,0	1/1:0,34:34:90.29:1168,90,0	1/1:0,25:25:69.22:896,69,0	1/1:0,23:23:69.20:865,69,0	1/1:0,15:15:42.14:545,42,0	1/1:2,43:45:99:1678,132,0	1/1:0,22:22:60.19:777,60,0	0/0:33,0:33:99:0,99,1463	0/0:26,0:26:78.25:0,78,1148	1/1:2,28:30:39.43:1007,39,0	1/1:0,20:20:54.18:701,54,0	1/1:0,22:22:63.20:818,63,0	0/0:28,0:28:81.25:0,81,1186	0/0:18,0:18:51.13:0,51,733	0/0:22,0:22:63.21:0,63,929	0/0:29,0:29:84.26:0,84,1221	0/0:38,0:38:99:0,114,1709	0/0:32,0:32:96.31:0,96,1418	0/0:28,0:28:81.27:0,81,1208	0/0:30,0:30:84.24:0,84,1229	1/1:0,19:19:48.16:623,48,0	1/1:0,31:31:93.30:1205,93,0	0/0:45,0:45:99:0,135,2023	1/1:0,4:4:12.04:156,12,0
chr10	54219641	.	C	CAATCAG	5275.40	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-1.567;DP=788;FS=0.000;HRun=0;HaplotypeScore=199.9480;InbreedingCoeff=0.9991;MQ=86.94;MQ0=0;MQRankSum=-11.972;QD=61.34;ReadPosRankSum=1.501;VQSLOD=4.6962;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,25:41:72.25:2165,72,0	0/0:11,0:11:33.07:0,33,685	0/0:36,0:36:98.29:0,98,2012	0/0:24,0:24:56.40:0,56,1145	0/0:21,0:21:60.16:0,60,1279	0/0:23,0:23:63.20:0,63,1431	0/0:24,0:24:66.21:0,66,1480	0/0:34,0:34:96.31:0,96,2138	0/0:19,0:19:54.15:0,54,1152	0/0:45,0:45:99:0,129,2868	0/0:16,0:16:42.13:0,42,944	0/0:33,0:33:93.29:0,93,2105	0/0:43,0:43:99:0,117,2663	0/0:38,0:38:99:0,111,2518	0/0:37,0:37:99:0,102,2285	0/0:32,0:32:87.28:0,87,2010	1/1:4,20:26:57.20:1953,57,0	1/1:4,11:19:36.12:1158,36,0	0/0:25,0:25:66.23:0,66,1487	0/0:35,0:35:96.30:0,96,2143	0/0:49,0:49:99:0,138,3192	0/0:29,0:29:81.28:0,81,1902	0/0:25,0:25:72.23:0,72,1652	0/0:21,0:21:60.21:0,60,1394	0/0:22,0:22:63.19:0,63,1361	0/0:30,0:30:81.26:0,81,1794	0/0:22,0:22:60.18:0,60,1293	0/0:8,0:8:24.07:0,24,520
chr10	54220180	.	TTGAG	T	559.44	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=4.115;DP=769;FS=2.939;HRun=0;HaplotypeScore=168.2000;InbreedingCoeff=0.2591;MQ=64.87;MQ0=10;MQRankSum=1.704;QD=4.86;ReadPosRankSum=-1.208;VQSLOD=2.7693;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:40,0:39:75.09:75,0,82	0/0:15,0:14:17.44:0,17,173	0/0:41,0:20:10.26:0,10,602	0/0:49,0:31:63.63:0,64,793	0/0:21,0:22:32.93:0,33,320	0/0:22,0:23:21.87:0,22,277	0/0:23,0:21:23.70:0,24,240	0/0:33,0:31:76.68:0,77,1167	0/0:14,0:14:12.01:0,12,158	0/0:25,0:24:47.04:0,47,970	0/0:16,0:15:11.89:0,12,88	0/0:30,0:30:87.10:0,87,1483	0/0:37,0:37:85.04:0,85,1801	0/0:22,0:21:23.37:0,23,316	0/0:36,0:36:74.16:0,74,835	0/0:25,0:24:32.71:0,33,476	0/1:13,0:29:30.75:31,0,65	0/1:20,0:24:85.22:85,0,231	1/1:4,16:19:47.58:491,48,0	0/0:21,1:22:4.47:0,4,13	0/0:47,0:47:14.94:0,15,109	0/0:35,0:35:76.13:0,76,2001	0/0:21,0:21:63.05:0,63,1413	0/0:35,0:35:92.76:0,93,2117	0/0:25,0:24:20.31:0,20,258	0/0:22,0:22:66.13:0,66,953	0/0:26,0:26:0.68:0,1,54	0/0:9,0:9:13.99:0,14,227
chr10	54220181	.	TGA	T	2854.13	PASS	AB=1.000;AC=12;AF=0.214;AN=56;BaseQRankSum=6.767;DP=759;FS=3.680;HRun=0;HaplotypeScore=138.2194;InbreedingCoeff=0.7503;MQ=63.62;MQ0=11;MQRankSum=1.723;QD=13.92;ReadPosRankSum=1.306;VQSLOD=3.7772;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:40,0:39:13.78:100,14,0	0/0:14,0:13:17.55:0,18,156	0/0:39,1:19:9.92:0,10,490	0/0:48,1:30:7.39:0,7,563	0/0:22,0:22:30.23:0,30,255	0/0:23,0:23:21.34:0,21,196	0/0:21,0:19:23.65:0,24,198	0/0:35,0:32:64.84:0,65,806	0/0:13,0:13:11.97:0,12,118	0/0:26,0:25:50:0,50,657	0/0:16,0:15:11.89:0,12,88	0/0:30,0:30:67.87:0,68,1081	0/0:36,0:36:72.28:0,72,1353	0/0:21,0:20:23.36:0,23,248	0/0:35,0:35:74.18:0,74,730	0/0:25,0:24:31.90:0,32,358	0/1:28,0:27:14.82:29,0,15	0/1:23,0:22:13.68:174,0,14	1/1:19,1:19:53.96:496,54,0	1/1:1,21:22:36.12:522,36,0	1/1:2,45:47:29.74:964,30,0	0/0:34,0:34:98.84:0,99,1467	0/0:23,0:23:59.01:0,59,1095	0/0:35,0:35:78.38:0,78,1504	0/0:25,0:23:20.73:0,21,202	0/0:22,0:22:66.11:0,66,724	1/1:1,24:25:25.77:749,26,0	0/0:9,0:9:13.71:0,14,159
chr10	54221289	.	TACACACACAC	T	5345.41	PASS	AB=0.713;AC=28;AF=0.538;AN=52;BaseQRankSum=5.689;DP=640;FS=0.544;HRun=0;HaplotypeScore=177.3324;InbreedingCoeff=0.7460;MQ=58.21;MQ0=19;MQRankSum=-9.214;QD=15.49;ReadPosRankSum=-0.145;VQSLOD=3.8734;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:27:11.99:0,12,218	0/0:6,0:6:12.04:0,12,543	./.	0/0:34,0:10:0.47:0,0,1	1/1:23,4:27:15.63:272,16,0	1/1:10,14:22:12.04:333,12,0	1/1:12,12:25:18.06:477,18,0	./.	1/1:13,8:20:5.69:179,6,0	0/1:15,2:20:5.94:249,0,6	1/1:8,13:21:6.34:158,6,0	0/0:13,0:16:21.54:0,22,895	0/0:18,0:18:33.11:0,33,1420	1/1:12,18:30:24.08:651,24,0	1/1:9,21:30:6.92:950,7,0	0/0:22,0:24:57.20:0,57,2432	0/0:6,0:22:29.27:0,29,428	0/0:13,0:22:27.09:0,27,461	1/1:10,0:14:8.61:69,9,0	0/1:8,1:19:8.93:172,0,9	1/1:19,0:30:5.99:49,6,0	0/0:16,0:21:36.41:0,36,1628	0/0:13,0:15:18.06:0,18,776	0/0:27,0:27:42.59:0,43,1776	1/1:6,12:18:9.03:260,9,0	1/1:11,10:21:30.04:696,30,0	1/1:5,0:25:27.25:337,27,0	1/1:11,5:14:21.03:494,21,0
chr10	54221404	.	C	CTG	9579.34	PASS	AB=0.967;AC=30;AF=0.556;AN=54;BaseQRankSum=-12.074;DP=565;FS=26.376;HRun=0;HaplotypeScore=76.8832;InbreedingCoeff=0.7944;MQ=66.57;MQ0=7;MQRankSum=-0.315;QD=29.66;ReadPosRankSum=0.979;VQSLOD=3.7066;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/0:16,0:16:42.13:0,42,507	0/0:22,0:17:7.82:0,8,204	0/1:19,0:14:19.12:19,0,62	1/1:7,20:27:12.36:904,12,0	1/1:1,23:24:57.19:915,57,0	1/1:5,13:18:2.95:542,3,0	1/1:11,15:26:45.14:694,45,0	1/1:3,17:18:39.13:626,39,0	1/1:9,20:29:20.99:809,21,0	1/1:7,20:27:63.21:991,63,0	0/0:20,0:20:51.16:0,51,615	0/0:27,0:27:78.21:0,78,917	1/1:3,15:18:18:767,18,0	1/1:4,21:24:51.07:818,51,0	0/0:24,0:24:69.18:0,69,806	1/1:10,0:9:5.74:36,6,0	1/1:9,0:12:20.96:173,21,0	0/0:18,0:18:42.12:0,42,497	0/0:25,0:25:63.19:0,63,760	0/0:19,0:19:45.14:0,45,541	0/0:11,0:11:27.08:0,27,326	0/0:19,0:19:51.14:0,51,603	0/1:12,1:13:18.09:18,0,295	1/1:2,21:23:60.20:963,60,0	1/1:1,18:19:57.17:868,57,0	0/0:31,0:30:84.26:0,84,1013	1/1:2,9:11:27.09:434,27,0
chr10	54222040	.	T	TGGTG	10692.01	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=4.319;DP=1006;FS=0.000;HRun=0;HaplotypeScore=218.5927;InbreedingCoeff=0.9405;MQ=60.96;MQ0=5;MQRankSum=-0.326;QD=25.89;ReadPosRankSum=-1.465;VQSLOD=4.3441;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:53:81.73:0,82,1183	1/1:0,0:13:32.90:289,33,0	0/0:47,0:30:61.16:0,61,1121	0/0:49,0:30:78.56:0,79,1429	1/1:4,19:30:8.96:506,9,0	1/1:1,22:23:36.46:790,36,0	1/1:2,27:36:23.21:266,23,0	1/1:6,18:28:51.89:805,52,0	1/1:3,39:50:70.86:1601,71,0	1/1:4,28:36:81.08:1579,81,0	1/1:2,15:20:2.16:474,2,0	0/0:50,0:51:99:0,147,2864	0/0:41,0:41:99:0,120,2424	1/1:4,29:36:51.30:1000,51,0	1/1:5,40:49:52.50:1149,52,0	1/1:2,0:30:60.08:610,60,0	0/0:40,0:40:28.25:0,28,744	0/0:24,0:25:57.29:0,57,632	0/0:31,0:29:81.25:0,81,1396	0/0:25,0:26:52.87:0,53,902	0/0:91,0:91:99:0,190,3351	0/0:19,0:19:54.19:0,54,1087	0/0:37,0:37:99:0,111,2150	0/0:51,0:53:99:0,144,2921	1/1:1,19:23:15.94:378,16,0	1/1:3,25:29:60.78:1171,61,0	0/0:30,0:29:54.09:0,54,997	1/1:1,7:8:3.48:73,3,0
chr10	54222041	.	AGT	A	3427.56	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-3.547;DP=1007;FS=12.617;HRun=0;HaplotypeScore=216.2798;InbreedingCoeff=0.9334;MQ=60.02;MQ0=5;MQRankSum=1.393;QD=19.59;ReadPosRankSum=3.083;VQSLOD=2.9308;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:53,1:54:99:0,129,1940	0/0:13,0:13:33:0,33,289	0/0:47,0:30:45.41:0,45,544	0/0:49,0:30:39.01:0,39,514	0/0:29,0:29:31.11:0,31,290	0/0:22,0:22:30.02:0,30,266	0/0:37,0:37:9.08:0,9,82	0/0:29,0:29:45.69:0,46,365	0/0:48,0:48:67.54:0,68,605	0/0:40,0:40:84.49:0,84,720	0/0:20,0:20:26.40:0,26,261	0/0:50,1:51:92.14:0,92,1933	0/0:41,0:41:99:0,114,1762	0/0:38,0:39:50.82:0,51,430	0/0:48,0:48:53.94:0,54,460	0/0:30,0:30:56.98:0,57,496	0/0:40,0:40:80.78:0,81,1271	0/0:24,0:24:59.07:0,59,957	1/1:15,15:28:39.12:479,39,0	1/1:6,19:25:35.96:446,36,0	1/1:15,75:90:99:1869,153,0	0/0:20,0:20:48.16:0,48,783	0/0:37,0:37:90.31:0,90,1473	0/0:53,0:53:99:0,133,2130	0/0:21,0:21:15:0,15,132	0/0:31,0:30:49.97:0,50,382	1/1:3,27:29:53.81:634,54,0	0/0:8,0:8:3:0,3,27
chr10	54222423	.	T	TC	16569.35	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-13.712;DP=648;FS=6.062;HRun=1;HaplotypeScore=64.9731;InbreedingCoeff=0.9990;MQ=96.38;MQ0=0;MQRankSum=-4.589;QD=44.30;ReadPosRankSum=3.669;VQSLOD=4.8273;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,42:41:99:1868,117,0	1/1:0,7:7:21.07:336,21,0	0/0:33,0:33:69.98:0,70,1041	0/0:31,0:31:77.92:0,78,1052	1/1:0,24:25:60.20:948,60,0	1/1:2,12:14:36.12:576,36,0	1/1:0,29:29:81.28:1295,81,0	1/1:1,32:33:99:1556,99,0	1/1:1,18:19:51.17:815,51,0	1/1:0,30:30:90.28:1394,90,0	1/1:1,16:17:45.15:719,45,0	0/0:20,0:20:60.20:0,60,831	0/0:22,0:22:66.21:0,66,907	1/1:0,19:19:54.18:863,54,0	1/1:3,24:27:66.22:1055,66,0	1/1:0,19:19:57.19:911,57,0	1/1:0,20:20:60.20:959,60,0	1/1:0,15:15:45.15:719,45,0	0/0:15,0:15:42.14:0,42,574	0/0:22,0:22:66.20:0,66,892	0/0:41,0:41:99:0,120,1633	0/0:12,0:12:33.10:0,33,445	0/0:17,0:17:36.07:0,36,426	0/0:31,0:31:93.31:0,93,1301	1/1:0,23:23:57.19:911,57,0	1/1:1,26:27:81.26:1258,81,0	0/0:30,0:30:90.26:0,90,1204	1/1:0,8:8:24.08:384,24,0
chr10	54222673	.	GTA	G	5686.42	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-6.683;DP=787;FS=6.255;HRun=0;HaplotypeScore=134.5572;InbreedingCoeff=0.9996;MQ=90.49;MQ0=0;MQRankSum=-4.031;QD=43.74;ReadPosRankSum=0.190;VQSLOD=5.6897;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,154,3053	0/0:12,0:12:33.10:0,33,610	0/0:32,0:31:81.19:0,81,1523	0/0:30,0:31:90.26:0,90,1662	0/0:28,0:28:84.25:0,84,1616	0/0:22,0:22:63.18:0,63,1238	0/0:29,0:29:84.27:0,84,1658	0/0:30,0:30:87.28:0,87,1686	0/0:26,0:26:78.25:0,78,1536	0/0:25,0:25:75.25:0,75,1490	0/0:16,0:16:45.11:0,45,872	0/0:41,0:41:99:0,123,2361	0/0:20,0:20:60.19:0,60,1182	0/0:33,0:33:99:0,99,1962	0/0:42,0:42:99:0,120,2310	0/0:37,0:37:99:0,111,2185	0/0:42,0:42:99:0,126,2458	0/0:16,0:16:45.15:0,45,912	1/1:9,24:33:99:1469,99,0	1/1:1,27:28:78.26:1247,78,0	1/1:3,39:42:99:1737,111,0	0/0:20,0:20:60.17:0,60,1134	0/0:20,0:20:60.18:0,60,1134	0/0:25,0:25:69.19:0,69,1290	0/0:18,0:17:48.16:0,48,975	0/0:29,0:29:87.29:0,87,1735	1/1:4,23:27:81.19:1232,81,0	0/0:9,0:9:27.09:0,27,547
chr10	54223690	.	C	CA	4992.20	PASS	AB=0.761;AC=34;AF=0.607;AN=56;BaseQRankSum=-1.482;DP=591;FS=8.361;HRun=12;HaplotypeScore=79.8640;InbreedingCoeff=0.7009;MQ=74.11;MQ0=1;MQRankSum=-2.063;QD=12.03;ReadPosRankSum=-4.674;VQSLOD=2.8791;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,1:32:51.32:0,51,539	1/1:2,1:16:37.05:189,37,0	0/0:17,0:15:10.84:0,11,57	0/0:14,0:14:4.35:0,4,77	1/1:1,23:24:41.24:522,41,0	0/1:4,7:12:4.05:113,0,4	1/1:5,24:31:30.64:587,31,0	1/1:13,16:30:22.27:392,22,0	0/1:15,3:18:1.41:121,0,1	1/1:10,14:24:20.16:357,20,0	1/1:7,14:22:26.45:391,26,0	0/0:25,0:25:56.50:0,57,408	0/0:12,0:12:20.79:0,21,151	1/1:7,5:12:5.14:207,5,0	1/1:4,10:15:31.07:266,31,0	1/1:3,1:19:25.59:143,26,0	0/0:20,0:22:20.21:0,20,264	0/0:16,0:15:35.77:0,36,263	1/1:9,1:18:38.52:225,39,0	1/1:7,0:27:55.80:310,56,0	1/1:2,0:18:17.04:86,17,0	0/1:32,4:38:37.19:37,0,405	0/0:17,0:18:40.72:0,41,290	0/0:18,0:18:44.70:0,45,328	1/1:3,15:19:35.79:322,36,0	1/1:15,12:28:22.99:368,23,0	1/1:9,0:28:37.30:207,37,0	0/1:8,6:15:35.89:149,0,36
chr10	54224493	.	GTT	G	7620.58	PASS	AB=0.548;AC=30;AF=0.536;AN=56;BaseQRankSum=-7.338;DP=626;FS=3.660;HRun=11;HaplotypeScore=98.5837;InbreedingCoeff=0.8466;MQ=74.50;MQ0=1;MQRankSum=0.145;QD=20.54;ReadPosRankSum=1.551;VQSLOD=4.4339;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:4,3:40:8.89:9,0,204	1/1:3,8:11:24.06:255,24,0	0/0:13,0:14:29.57:0,30,383	0/0:19,0:19:32.35:0,32,362	1/1:1,23:24:66.16:702,66,0	1/1:2,18:20:4.94:465,5,0	1/1:0,13:14:30.03:375,30,0	1/1:12,23:35:66.07:702,66,0	1/1:3,21:24:39.59:615,40,0	1/1:4,20:23:57.08:600,57,0	1/1:1,25:27:63.09:726,63,0	0/0:20,0:20:57.19:0,57,873	0/0:30,0:31:90.29:0,90,1363	1/1:3,18:21:51.11:543,51,0	1/1:2,17:20:45.05:534,45,0	1/1:2,16:18:48.12:511,48,0	0/0:2,0:16:35.45:0,35,157	0/0:5,0:24:44.92:0,45,154	0/1:8,3:33:28.95:29,0,146	0/0:4,0:33:67.37:0,67,231	0/0:1,0:17:37.43:0,37,128	0/0:18,0:19:54.17:0,54,794	0/0:22,0:23:62.67:0,63,887	0/0:10,0:12:26.56:0,27,357	1/1:2,23:26:57.03:662,57,0	1/1:2,20:22:60.15:639,60,0	0/0:1,0:27:62.38:0,62,214	1/1:4,8:12:23.86:255,24,0
chr10	54224665	.	T	TG	3988.66	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=12.568;DP=669;FS=0.848;HRun=1;HaplotypeScore=76.7181;InbreedingCoeff=0.9998;MQ=86.33;MQ0=0;MQRankSum=-2.392;QD=37.99;ReadPosRankSum=2.332;VQSLOD=4.2729;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,49:49:99:1865,129,0	0/0:12,0:12:33.11:0,33,428	0/0:25,0:25:72.20:0,72,899	0/0:19,0:19:54.09:0,54,648	0/0:19,0:19:54.17:0,54,688	0/0:24,0:24:72.23:0,72,934	0/0:28,0:28:84.26:0,84,1075	0/0:34,0:34:90.29:0,90,1157	0/0:27,0:27:78.22:0,78,983	0/0:24,0:24:69.21:0,69,882	0/0:22,0:22:63.17:0,63,788	0/0:33,0:33:96.30:0,96,1232	0/0:27,0:27:78.23:0,78,985	0/0:21,0:21:63.19:0,63,804	0/0:23,0:23:66.20:0,66,842	0/0:24,0:24:72.22:0,72,920	1/1:0,34:34:93.31:1344,93,0	1/1:1,21:22:54.18:779,54,0	0/0:24,0:24:69.11:0,69,836	0/0:19,0:19:54.16:0,54,677	0/0:21,0:21:63.20:0,63,818	0/0:14,0:14:42.12:0,42,529	0/0:12,0:12:33.11:0,33,428	0/0:26,0:26:75.24:0,75,974	0/0:18,0:18:54.18:0,54,701	0/0:19,0:19:54.17:0,54,689	0/0:34,0:34:96.31:0,96,1246	0/0:15,0:15:42.09:0,42,526
chr10	54226241	.	G	GT	8905.14	PASS	AB=0.974;AC=33;AF=0.589;AN=56;BaseQRankSum=7.956;DP=696;FS=10.126;HRun=8;HaplotypeScore=137.0572;InbreedingCoeff=0.7849;MQ=68.67;MQ0=2;MQRankSum=-6.856;QD=21.30;ReadPosRankSum=-0.422;VQSLOD=3.2769;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:20:29.51:93,0,30	1/1:4,1:14:34.37:192,34,0	0/0:48,0:26:44.33:0,44,360	0/0:30,0:25:29.77:0,30,257	1/1:4,22:26:66.14:731,66,0	1/1:5,21:26:63.19:727,63,0	1/1:8,18:28:68.72:723,69,0	1/1:15,19:34:61.12:703,61,0	1/1:5,16:21:57.04:606,57,0	1/1:10,31:42:80.82:1162,81,0	1/1:3,13:16:17.67:449,18,0	0/0:20,0:20:54:0,54,487	0/1:11,1:12:4.62:5,0,217	1/1:6,16:22:57.14:638,57,0	1/1:3,21:24:72.16:797,72,0	1/1:8,0:28:74.41:394,74,0	1/1:20,0:20:7.02:99,7,0	0/1:29,0:29:63.03:87,0,63	0/0:31,0:31:66.01:0,66,600	0/0:25,0:25:66:0,66,598	0/0:17,0:17:44.99:0,45,402	0/0:28,0:28:72.03:0,72,657	0/0:24,0:24:63.03:0,63,574	0/0:27,0:27:71.84:0,72,636	1/1:6,11:17:30.84:407,31,0	1/1:7,22:29:68.16:814,68,0	0/0:27,0:27:72.01:0,72,649	1/1:0,8:8:24.07:277,24,0
chr10	54226246	.	T	TTTTG	2950.58	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-0.848;DP=705;FS=1.457;HRun=0;HaplotypeScore=205.3656;InbreedingCoeff=0.9409;MQ=67.57;MQ0=2;MQRankSum=-6.794;QD=25.22;ReadPosRankSum=0.874;VQSLOD=3.6444;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,12:21:48.02:1054,48,0	1/1:13,0:13:6.75:45,7,0	0/0:48,0:24:25.76:0,26,257	0/0:31,0:24:7.81:0,8,318	0/0:26,0:26:59.14:0,59,308	0/0:28,0:27:58.92:0,59,300	0/0:28,0:28:53.33:0,53,287	0/0:30,0:30:56.20:0,56,333	0/0:21,0:21:46.64:0,47,250	0/0:42,0:42:93.34:0,93,508	0/0:20,0:20:45.49:0,45,279	0/0:20,0:20:54.17:0,54,856	0/0:13,0:13:35.88:0,36,496	0/0:21,0:21:47.77:0,48,240	0/0:26,0:26:61.72:0,62,318	1/1:28,0:28:18.41:104,18,0	1/1:7,16:23:39.13:928,39,0	1/1:11,19:29:43.39:989,43,0	0/0:30,0:30:63.05:0,63,899	0/0:28,0:28:78.22:0,78,1219	0/0:18,0:18:51.11:0,51,695	0/0:28,0:28:72.23:0,72,1169	0/0:24,0:24:69.21:0,69,1079	0/0:27,0:27:66.19:0,66,1036	0/0:16,0:16:36.68:0,37,201	0/0:29,0:29:61.54:0,62,348	0/0:26,0:26:60.21:0,60,1002	0/0:8,0:8:7.34:0,7,39
chr10	54226269	.	ATTTG	A	13022.04	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=11.681;DP=660;FS=9.028;HRun=0;HaplotypeScore=161.7882;InbreedingCoeff=0.9943;MQ=63.21;MQ0=7;MQRankSum=-10.066;QD=40.57;ReadPosRankSum=1.320;VQSLOD=5.0775;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:43.63:0,44,713	1/1:15,1:16:43.97:288,44,0	0/0:32,0:15:21.89:0,22,548	0/0:24,0:15:18.40:0,18,264	1/1:5,14:20:51.11:864,51,0	1/1:3,20:22:63.14:1091,63,0	1/1:6,20:26:65.83:1210,66,0	1/1:6,21:27:69.13:1182,69,0	1/1:3,19:23:63.19:1061,63,0	1/1:15,22:35:96.03:1462,96,0	1/1:4,19:23:63.20:1102,63,0	0/0:22,0:22:63.20:0,63,1479	0/0:16,0:16:45.14:0,45,1014	1/1:3,19:22:57.15:977,57,0	1/1:5,27:32:84.27:1494,84,0	1/1:24,0:24:62.65:415,63,0	0/0:22,0:22:32.61:0,33,698	0/0:21,0:20:48.97:0,49,702	0/0:24,0:22:57.05:0,57,1117	0/0:35,0:35:99:0,102,2409	0/0:17,0:17:51.17:0,51,1210	0/0:25,0:25:75.20:0,75,1676	0/0:25,0:25:75.21:0,75,1700	0/0:32,0:32:93.28:0,93,2144	1/1:5,14:19:45.06:748,45,0	1/1:7,16:23:60.07:903,60,0	0/0:23,0:23:69.22:0,69,1603	1/1:0,6:4:12.04:227,12,0
chr10	54226270	.	TTTG	T	9224.98	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=14.256;DP=654;FS=9.733;HRun=0;HaplotypeScore=161.7849;InbreedingCoeff=0.9914;MQ=63.31;MQ0=7;MQRankSum=-10.219;QD=29.10;ReadPosRankSum=1.092;VQSLOD=4.9409;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:18.89:0,19,484	1/1:3,13:16:45.14:704,45,0	0/0:31,1:15:25.05:0,25,463	0/0:23,0:15:13.24:0,13,244	1/1:19,1:20:51.11:546,51,0	1/1:22,1:22:63.15:679,63,0	1/1:26,0:26:71.35:718,71,0	1/1:27,0:27:69.55:690,70,0	1/1:23,0:23:62.88:637,63,0	1/1:35,0:33:95.95:945,96,0	1/1:22,1:23:62.93:638,63,0	0/0:21,0:21:63.20:0,63,1265	0/0:15,0:15:45.14:0,45,845	1/1:22,0:22:57.10:587,57,0	1/1:31,0:31:84.19:878,84,0	1/1:6,18:24:69.04:1029,69,0	0/0:22,0:22:33.09:0,33,528	0/0:21,0:20:45.54:0,46,554	0/0:24,0:22:57.05:0,57,965	0/0:35,0:35:99:0,102,1968	0/0:17,0:17:51.16:0,51,992	0/0:25,0:25:75.20:0,75,1393	0/0:25,0:25:75.21:0,75,1400	0/0:32,0:32:93.17:0,93,1781	1/1:18,0:18:44.98:452,45,0	1/1:22,1:23:58.34:594,58,0	0/0:25,0:25:75.23:0,75,1419	1/1:6,0:4:12.03:128,12,0
chr10	54226271	.	TTG	T	7309.79	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=14.948;DP=651;FS=11.227;HRun=0;HaplotypeScore=155.8916;InbreedingCoeff=0.9278;MQ=64.06;MQ0=7;MQRankSum=-11.641;QD=21.82;ReadPosRankSum=1.101;VQSLOD=4.8627;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:31.10:0,31,343	1/1:16,0:16:44.97:402,45,0	0/0:31,0:16:27.53:0,28,398	0/0:23,0:15:7.29:0,7,210	1/1:17,2:19:50.99:443,51,0	1/1:23,0:22:62.99:550,63,0	1/1:25,0:25:71.43:601,71,0	1/1:25,1:26:69.26:574,69,0	1/1:22,1:23:62.03:531,62,0	1/1:35,0:33:95.72:822,96,0	1/1:21,2:23:61.55:530,62,0	0/0:21,0:21:63.20:0,63,1020	0/0:15,0:15:45.10:0,45,665	1/1:22,0:22:56.98:499,57,0	1/1:29,2:31:83.98:732,84,0	1/1:23,1:24:69.03:642,69,0	0/1:22,0:22:5.60:6,0,332	0/0:21,0:20:22.10:0,22,388	0/0:23,0:21:57.05:0,57,793	0/0:35,0:35:99:0,102,1581	0/0:17,0:17:51.14:0,51,791	0/0:25,0:25:75.19:0,75,1131	0/0:26,0:26:78.20:0,78,1150	0/0:31,0:31:93.18:0,93,1438	1/1:17,1:18:44.93:381,45,0	1/1:20,2:22:57.43:492,57,0	0/0:26,0:26:78.21:0,78,1159	1/1:6,0:4:12:105,12,0
chr10	54226272	.	TG	T	5988.37	PASS	AB=0.978;AC=30;AF=0.536;AN=56;BaseQRankSum=15.093;DP=651;FS=14.708;HRun=1;HaplotypeScore=149.0695;InbreedingCoeff=0.8201;MQ=65.69;MQ0=7;MQRankSum=-10.963;QD=16.68;ReadPosRankSum=1.192;VQSLOD=3.7666;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:19.53:0,20,235	1/1:16,0:16:44.80:340,45,0	0/0:31,2:16:10.41:0,10,312	0/1:25,0:18:24.55:25,0,195	1/1:19,0:19:50.52:353,51,0	1/1:23,0:22:62.39:437,62,0	1/1:23,1:24:66.64:493,67,0	1/1:26,0:26:68.94:458,69,0	1/1:23,0:23:59.93:424,60,0	1/1:36,0:34:94.83:696,95,0	1/1:23,0:23:58.66:423,59,0	0/0:22,0:22:63.16:0,63,798	0/0:15,0:15:45.09:0,45,529	1/1:21,1:22:56.49:406,56,0	1/1:31,0:31:83.22:592,83,0	1/1:23,1:24:68.65:515,69,0	0/1:21,1:22:27.65:28,0,199	0/0:20,0:19:2.70:0,3,263	0/0:22,0:20:56.72:0,57,635	0/0:34,0:34:99:0,102,1244	0/0:17,0:17:51.13:0,51,623	0/0:25,0:25:75.18:0,75,907	0/0:26,0:26:78.17:0,78,916	0/0:31,0:31:93.14:0,93,1130	1/1:17,0:17:44.31:309,44,0	1/1:22,0:22:56.42:408,56,0	0/0:26,0:26:78.10:0,78,885	1/1:6,0:4:11.87:81,12,0
chr10	54227448	.	TATAG	T	3404.35	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=-7.067;DP=576;FS=0.962;HRun=0;HaplotypeScore=125.2391;InbreedingCoeff=0.8748;MQ=72.10;MQ0=0;MQRankSum=-0.663;QD=35.46;ReadPosRankSum=-1.687;VQSLOD=3.6092;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:81.25:0,81,1442	0/0:8,0:8:24.08:0,24,670	0/0:9,0:10:23.93:0,24,400	0/0:7,0:7:14.66:0,15,275	0/0:22,0:22:60.21:0,60,1114	0/0:23,0:23:19.44:0,19,1014	0/0:16,0:16:20.33:0,20,744	0/0:33,0:33:68.63:0,69,1481	0/1:22,0:22:8.29:8,0,950	0/0:36,0:36:24.16:0,24,1483	0/0:35,0:35:50.57:0,51,1564	0/0:21,0:21:63.13:0,63,1463	0/0:24,0:24:69.22:0,69,1768	0/0:19,0:19:57.14:0,57,956	0/0:27,0:27:56.40:0,56,1341	0/0:14,0:14:42.10:0,42,997	0/0:11,0:11:33.10:0,33,584	0/0:26,0:26:78.25:0,78,1392	1/1:0,11:11:33.02:477,33,0	1/1:0,21:21:54.19:1074,54,0	1/1:0,9:9:27.09:531,27,0	0/0:15,0:15:39.12:0,39,1028	0/0:23,0:23:69.24:0,69,1928	0/0:17,0:17:51.12:0,51,1204	0/0:27,0:27:55.49:0,55,1408	0/0:28,0:28:57.56:0,58,1385	1/1:3,30:33:66.23:1313,66,0	0/0:11,0:11:33.08:0,33,578
chr10	54228097	.	A	AG	28518.57	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=-17.368;DP=870;FS=26.066;HRun=0;HaplotypeScore=77.8039;InbreedingCoeff=0.9995;MQ=93.13;MQ0=0;MQRankSum=-6.625;QD=44.28;ReadPosRankSum=4.583;VQSLOD=2.8231;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,55:56:99:2396,151,0	1/1:1,8:9:24.08:383,24,0	0/0:44,0:44:99:0,129,1621	0/0:31,0:31:79.72:0,80,1087	1/1:0,35:35:99:1547,99,0	1/1:1,30:31:84.29:1342,84,0	1/1:0,33:33:87.30:1390,87,0	1/1:0,41:41:99:1937,123,0	1/1:1,30:31:87.30:1387,87,0	1/1:0,39:39:99:1798,117,0	1/1:0,13:13:39.13:623,39,0	0/0:39,0:39:99:0,114,1554	0/0:24,0:24:72.24:0,72,1006	1/1:0,36:36:99:1580,99,0	1/1:0,41:41:99:1820,114,0	1/1:0,28:28:75.26:1197,75,0	1/1:0,43:43:99:1869,117,0	1/1:0,24:24:72.25:1150,72,0	1/1:3,22:25:69.20:1075,69,0	1/1:1,23:24:69.23:1092,69,0	1/1:1,34:35:93.32:1486,93,0	0/0:14,0:14:42.12:0,42,569	0/0:23,0:23:69.21:0,69,944	0/0:51,0:51:99:0,147,2012	1/1:0,38:38:99:1724,108,0	1/1:0,24:24:72.25:1145,72,0	1/1:0,28:27:69.24:1102,69,0	1/1:0,10:10:30.10:479,30,0
chr10	54228713	.	ACAAT	A	8723.43	PASS	AB=0.529;AC=27;AF=0.482;AN=56;BaseQRankSum=4.828;DP=586;FS=6.307;HRun=0;HaplotypeScore=116.8544;InbreedingCoeff=0.9181;MQ=70.73;MQ0=0;MQRankSum=-2.643;QD=30.18;ReadPosRankSum=3.465;VQSLOD=4.2964;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,111,2636	1/1:1,3:4:6.02:100,6,0	0/0:14,0:14:26.98:0,27,449	0/0:20,0:21:43.03:0,43,901	1/1:8,16:24:42.14:702,42,0	1/1:4,14:18:33.11:552,33,0	1/1:7,12:19:27.09:451,27,0	1/1:16,16:32:48.14:748,48,0	1/1:6,13:19:36.12:602,36,0	1/1:4,20:24:57.19:947,57,0	1/1:6,16:22:33.11:552,33,0	0/0:16,0:16:39.13:0,39,913	0/0:24,0:24:69.22:0,69,1636	0/1:3,24:27:10.98:939,0,11	1/1:10,16:26:30.10:502,30,0	1/1:2,23:25:57.19:952,57,0	0/0:23,0:23:60.21:0,60,1457	0/0:12,0:12:33.10:0,33,755	0/0:16,0:16:21.07:0,21,501	0/0:20,0:20:39.13:0,39,893	0/0:20,0:20:54.19:0,54,1332	0/0:19,0:19:48.12:0,48,1109	0/0:25,0:25:60.20:0,60,1430	0/0:19,0:19:48.15:0,48,1139	1/1:2,16:18:42.14:702,42,0	1/1:9,14:23:38.51:574,39,0	0/0:23,0:22:60.21:0,60,1467	1/1:0,8:8:24.08:401,24,0
chr10	54229076	.	CA	C	492.23	PASS	AB=0.886;AC=17;AF=0.340;AN=50;BaseQRankSum=4.937;DP=309;FS=0.000;HRun=1;HaplotypeScore=45.0053;InbreedingCoeff=0.1821;MQ=36.52;MQ0=67;MQRankSum=-1.892;QD=5.66;ReadPosRankSum=0.635;VQSLOD=0.3283;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:18:17.74:0,18,211	./.	0/0:34,0:2:3.01:0,3,38	0/0:52,0:2:6.02:0,6,76	0/1:4,0:4:0:0,0,0	0/1:2,2:4:23.53:81,0,24	0/1:7,1:7:25.80:26,0,65	0/0:9,0:7:1.12:0,1,202	1/1:7,3:10:11.67:111,12,0	0/1:9,1:8:31.27:31,0,114	./.	0/0:22,0:21:53.37:0,53,662	0/0:13,0:13:34.31:0,34,413	0/1:8,1:9:15.56:130,0,16	1/1:8,1:8:11.09:93,11,0	0/0:8,0:7:7.67:0,8,50	0/0:4,0:4:12:0,12,134	0/0:12,0:12:32.69:0,33,387	0/1:9,1:7:29.11:29,0,53	1/1:2,0:1:2.90:16,3,0	0/0:17,0:13:2.39:0,2,37	0/0:6,0:6:6.02:0,6,76	0/0:4,0:4:2.60:0,3,48	0/0:16,0:16:32.31:0,32,393	1/1:6,0:6:3.01:39,3,0	0/1:12,1:11:47.01:47,0,174	1/1:1,1:2:5.38:40,5,0	./.
chr10	54229080	.	CA	C	285.04	PASS	AB=0.881;AC=16;AF=0.333;AN=48;BaseQRankSum=6.127;DP=300;FS=7.701;HRun=1;HaplotypeScore=45.9164;InbreedingCoeff=0.0948;MQ=35.75;MQ0=67;MQRankSum=-3.019;QD=3.10;ReadPosRankSum=1.475;VQSLOD=-0.4335;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:11:8.62:0,9,77	./.	0/0:37,0:2:3.01:0,3,38	0/0:52,0:1:3.01:0,3,38	0/1:4,0:4:0:0,0,0	0/1:1,2:3:26.56:44,0,27	0/1:7,2:8:18.88:19,0,69	0/0:9,0:8:20.55:0,21,224	1/1:10,2:12:11.74:87,12,0	0/1:7,1:7:3.35:3,0,132	./.	0/0:22,0:21:50.38:0,50,635	0/0:14,0:14:35.50:0,36,413	0/1:7,1:8:21.81:22,0,29	1/1:8,1:8:11.77:79,12,0	0/1:8,0:7:24.66:27,0,25	0/0:4,0:4:3.01:0,3,38	0/0:8,0:8:20.65:0,21,233	0/1:11,1:9:32.56:33,0,136	./.	0/0:16,0:13:2.39:0,2,37	0/0:5,0:5:6.02:0,6,76	0/0:5,0:5:5.61:0,6,85	0/0:16,1:17:0.74:0,1,353	1/1:4,0:4:2.99:24,3,0	0/1:12,1:11:42.83:43,0,156	1/1:1,1:2:5.81:47,6,0	./.
chr10	54229084	.	CACA	C	559.17	PASS	AB=0.904;AC=16;AF=0.381;AN=42;BaseQRankSum=4.682;DP=295;FS=12.492;HRun=0;HaplotypeScore=51.1569;InbreedingCoeff=-0.0193;MQ=35.24;MQ0=69;MQRankSum=-5.771;QD=5.18;ReadPosRankSum=2.266;VQSLOD=0.2178;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:12,0:10:2.47:13,2,0	./.	./.	./.	0/1:4,0:4:0:0,0,0	0/1:2,2:4:16.05:76,0,16	0/1:10,1:9:31.43:31,0,40	0/0:8,0:8:6.45:0,6,40	0/1:10,2:12:2.79:115,0,3	0/1:6,1:6:27.19:27,0,53	./.	0/0:21,0:20:54.03:0,54,717	0/0:11,0:11:27.95:0,28,360	0/1:6,1:7:8.88:21,0,9	1/1:7,1:7:5.88:50,6,0	0/1:8,0:8:33.10:105,0,33	0/0:2,0:2:0.89:0,1,2	0/1:7,0:7:22.16:22,0,57	0/1:12,1:10:9.69:85,0,10	./.	0/0:18,0:15:3.48:0,3,34	0/0:6,0:6:9.03:0,9,109	0/0:6,0:6:8.84:0,9,148	0/0:16,0:16:32.60:0,33,408	./.	0/1:10,1:9:31.43:31,0,83	1/1:3,1:4:11.98:116,12,0	./.
chr10	54229089	.	ACCAAC	A	1177.60	PASS	AB=0.929;AC=24;AF=0.545;AN=44;BaseQRankSum=3.168;DP=294;FS=0.000;HRun=0;HaplotypeScore=54.5483;InbreedingCoeff=0.3952;MQ=34.08;MQ0=73;MQRankSum=-4.401;QD=9.57;ReadPosRankSum=1.993;VQSLOD=1.0759;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:11,0:10:1.56:9,0,2	0/0:3,0:3:5.71:0,6,32	./.	./.	0/1:1,2:4:0:0,0,0	1/1:3,0:4:8.72:101,9,0	1/1:6,8:11:11.96:199,12,0	1/1:3,5:8:12.03:170,12,0	1/1:6,9:14:11.76:127,12,0	1/1:2,5:6:14.98:220,15,0	./.	0/0:13,0:12:24.03:0,24,517	0/0:9,0:9:20.66:0,21,528	1/1:1,6:7:5.84:73,6,0	1/1:3,3:6:2.96:19,3,0	0/1:10,0:10:10.07:10,0,75	0/1:5,0:5:18.21:18,0,90	0/1:5,0:5:14.52:15,0,69	1/1:13,0:10:17.77:178,18,0	./.	0/0:18,0:14:3.95:0,4,39	0/0:3,0:3:6.02:0,6,172	0/0:7,0:7:8.76:0,9,259	0/0:13,0:13:7.07:0,7,465	./.	1/1:5,5:9:11.16:185,11,0	0/1:4,0:4:9.50:9,0,79	./.
chr10	54229091	.	CA	C	1202.98	PASS	AB=0.952;AC=31;AF=0.674;AN=46;BaseQRankSum=5.941;DP=292;FS=1.900;HRun=2;HaplotypeScore=45.5064;InbreedingCoeff=0.6168;MQ=34.31;MQ0=72;MQRankSum=-5.711;QD=9.47;ReadPosRankSum=-1.996;VQSLOD=0.6753;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:10,2:11:2.78:7,3,0	1/1:1,2:3:4.21:23,4,0	./.	./.	0/1:4,0:4:0:0,0,0	1/1:1,3:4:9.86:79,10,0	1/1:12,1:11:10.60:67,11,0	1/1:7,0:7:12.51:138,13,0	1/1:10,3:13:11.71:114,12,0	1/1:6,1:6:14.12:124,14,0	./.	0/0:11,0:10:24.07:0,24,325	0/0:10,0:10:24.06:0,24,331	1/1:6,1:7:5.60:36,6,0	1/1:4,1:5:3:30,3,0	1/1:3,6:9:17.44:164,17,0	1/1:0,5:5:11.89:108,12,0	0/1:5,1:6:30.30:49,0,30	1/1:5,6:11:22.25:217,22,0	./.	0/0:19,1:16:2.38:0,2,36	0/0:3,0:3:6.02:0,6,90	0/0:6,0:6:8.35:0,8,134	0/0:12,0:12:25:0,25,298	./.	1/1:9,1:9:11.91:94,12,0	1/1:3,2:5:14.79:109,15,0	0/1:2,0:2:0:0,0,0
chr10	54229092	.	A	ACC	1137.94	PASS	AB=0.946;AC=25;AF=0.568;AN=44;BaseQRankSum=3.907;DP=289;FS=5.693;HRun=2;HaplotypeScore=48.8643;InbreedingCoeff=0.2662;MQ=34.67;MQ0=72;MQRankSum=-5.477;QD=9.64;ReadPosRankSum=-3.376;VQSLOD=-0.6706;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,8:12:3.11:13,3,0	1/1:3,0:3:4.78:24,5,0	./.	./.	./.	0/1:3,0:4:2.44:63,0,2	0/1:12,0:11:11.80:29,0,12	1/1:6,0:6:12.88:160,13,0	0/1:14,0:13:0.28:95,0,0	0/1:7,0:6:10.86:92,0,11	./.	0/0:13,0:12:23.97:0,24,345	0/0:10,0:10:24.06:0,24,359	0/1:7,0:7:10.80:20,0,11	1/1:4,0:4:3.01:30,3,0	1/1:8,0:8:2.18:87,2,0	1/1:5,0:5:11.89:108,12,0	0/1:2,3:5:30.26:86,0,30	1/1:12,0:10:20.88:216,21,0	./.	0/0:6,14:16:3.01:0,3,39	0/0:3,0:3:6.02:0,6,98	0/0:6,0:6:8.50:0,8,146	0/0:12,0:12:25.29:0,25,313	./.	0/1:10,0:9:1.63:71,0,2	1/1:5,0:5:14.90:187,15,0	1/1:2,0:2:1.25:3,1,0
chr10	54230096	.	AGTGTGT	A	1940.67	PASS	AB=0.733;AC=20;AF=0.400;AN=50;BaseQRankSum=5.563;DP=693;FS=2.124;HRun=0;HaplotypeScore=143.7649;InbreedingCoeff=0.7047;MQ=63.26;MQ0=10;MQRankSum=-4.516;QD=7.55;ReadPosRankSum=-0.071;VQSLOD=2.4058;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:34:4.75:5,0,133	0/0:4,0:6:3.01:0,3,78	./.	./.	1/1:12,6:17:5.76:81,6,0	0/0:17,5:19:2.99:0,3,24	1/1:17,11:25:8.79:170,9,0	./.	1/1:17,10:27:21.07:427,21,0	0/1:13,9:21:67.37:217,0,67	1/1:7,10:17:8.60:101,9,0	0/0:24,0:27:23.36:0,23,448	0/0:29,0:30:52.97:0,53,1228	1/1:19,6:25:6.48:89,6,0	1/1:20,8:28:20.98:345,21,0	0/0:16,0:19:4.82:0,5,142	0/0:20,0:29:36.09:0,36,450	0/0:12,0:19:21.42:0,21,262	0/0:28,0:27:18.06:0,18,361	0/0:19,0:20:27.09:0,27,682	0/0:44,0:50:51.14:0,51,1265	0/0:22,0:23:36.12:0,36,881	0/0:19,0:20:30.09:0,30,767	0/0:47,0:49:92.40:0,92,2521	1/1:12,12:26:20.97:306,21,0	1/1:15,5:19:11.89:203,12,0	0/0:14,0:16:19.62:0,20,479	1/1:5,5:10:8.82:183,9,0
chr10	54230654	.	CTCAT	C	1356.93	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=7.831;DP=504;FS=5.642;HRun=0;HaplotypeScore=95.1460;InbreedingCoeff=0.9339;MQ=76.07;MQ0=0;MQRankSum=-5.366;QD=27.14;ReadPosRankSum=0.146;VQSLOD=2.8423;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,14:19:39.13:644,39,0	0/0:14,0:14:33.11:0,33,821	0/0:18,0:17:21.07:0,21,415	0/0:13,0:10:3.01:0,3,75	0/0:31,0:31:84.27:0,84,2021	0/0:21,0:21:45.15:0,45,1068	0/0:8,0:8:18.06:0,18,418	0/0:37,0:37:78.26:0,78,1888	0/0:15,0:15:42.14:0,42,1015	0/0:16,0:16:48.16:0,48,1126	0/0:30,0:30:84.29:0,84,2078	0/0:16,0:16:39.13:0,39,952	0/0:12,0:12:33.11:0,33,821	0/0:11,0:11:30.10:0,30,743	0/0:20,0:20:51.18:0,51,1270	0/0:11,0:11:30.10:0,30,747	1/1:9,10:19:27.09:456,27,0	1/1:6,6:12:27.05:399,27,0	0/0:18,0:18:33.11:0,33,805	0/0:27,0:27:66.23:0,66,1638	0/0:23,0:23:45.10:0,45,1016	0/0:11,0:11:30.10:0,30,716	0/0:13,0:13:24.08:0,24,592	0/0:12,0:12:24.08:0,24,597	0/0:19,0:19:51.17:0,51,1233	0/0:26,0:26:66.22:0,66,1560	0/0:19,0:19:48.16:0,48,1151	0/0:13,0:13:39.13:0,39,931
chr10	54230697	.	GTTTA	G	2145.52	PASS	AB=0.859;AC=35;AF=0.729;AN=48;BaseQRankSum=1.481;DP=368;FS=1.159;HRun=0;HaplotypeScore=86.2368;InbreedingCoeff=0.4290;MQ=55.73;MQ0=1;MQRankSum=-1.304;QD=7.40;ReadPosRankSum=2.642;VQSLOD=2.2377;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:26:2.98:21,3,0	1/1:6,4:10:12.04:177,12,0	./.	./.	1/1:13,3:16:15.04:212,15,0	1/1:10,5:15:8.96:140,9,0	./.	0/1:37,0:36:18.98:45,0,19	1/1:9,3:12:9.03:140,9,0	1/1:11,1:11:9.02:121,9,0	1/1:20,2:22:9.03:140,9,0	0/0:9,0:9:6.01:0,6,98	0/0:8,0:8:3.01:0,3,71	1/1:7,1:8:3.01:47,3,0	1/1:8,3:11:9.03:140,9,0	1/1:6,1:7:3.01:47,3,0	0/1:10,0:14:1.05:13,0,1	1/1:4,0:5:2.96:19,3,0	1/1:13,0:15:6:55,6,0	0/1:15,0:20:8.85:11,0,9	./.	0/0:7,0:7:3.01:0,3,71	0/0:7,0:7:12.02:0,12,236	0/0:7,0:7:12.04:0,12,256	1/1:14,3:16:14.96:181,15,0	1/1:10,7:17:21.05:301,21,0	1/1:8,0:12:12.01:109,12,0	1/1:5,9:14:24.08:374,24,0
chr10	54230758	.	CTGTG	C	2190.26	PASS	AB=0.712;AC=12;AF=0.214;AN=56;BaseQRankSum=2.175;DP=468;FS=34.054;HRun=0;HaplotypeScore=131.4852;InbreedingCoeff=0.6222;MQ=53.38;MQ0=12;MQRankSum=-5.194;QD=15.00;ReadPosRankSum=6.105;VQSLOD=1.6020;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:20,0:35:16.75:244,0,17	0/0:7,0:11:24.08:0,24,415	0/0:34,0:11:15.05:0,15,306	0/0:32,0:18:26.51:0,27,380	0/0:6,0:17:27.48:0,27,454	0/0:6,0:16:33.11:0,33,565	0/0:3,0:10:15.05:0,15,263	0/0:26,0:35:36.07:0,36,503	0/0:4,0:11:18.06:0,18,291	0/0:6,0:22:50.93:0,51,815	0/0:7,0:11:23.73:0,24,399	0/1:15,0:15:2.50:2,0,853	0/0:8,0:9:23.82:0,24,522	0/0:2,0:7:9.03:0,9,158	0/0:0,0:9:20.10:0,20,316	0/0:1,0:8:15.05:0,15,263	1/1:8,0:19:24.03:224,24,0	0/1:2,0:8:3.17:97,0,3	1/1:7,8:14:27.05:393,27,0	0/1:5,14:18:36.94:504,0,37	1/1:3,11:14:24.04:364,24,0	0/0:16,0:19:53.36:0,53,1052	0/0:11,0:11:20.81:0,21,431	0/0:12,0:13:38.60:0,39,793	0/0:6,0:16:22.14:0,22,314	0/0:10,0:13:24.01:0,24,327	1/1:4,15:20:36.08:533,36,0	0/0:11,0:11:12.02:0,12,189
chr10	54231595	.	TTTTGCCTGCA	T	2400.01	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.914;DP=666;FS=0.000;HRun=0;HaplotypeScore=190.1483;InbreedingCoeff=0.9851;MQ=71.98;MQ0=0;MQRankSum=-8.540;QD=42.86;ReadPosRankSum=-1.225;VQSLOD=3.0366;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,24:31:48.12:1316,48,0	0/0:7,0:7:21.07:0,21,998	0/0:11,0:11:30.08:0,30,1137	0/0:11,0:11:20.23:0,20,848	0/0:29,0:29:75.26:0,75,3949	0/0:24,0:24:69.24:0,69,3559	0/0:36,0:36:99:0,108,5141	0/0:35,0:35:99:0,99,4508	0/0:28,0:28:84.27:0,84,4268	0/0:29,0:29:78.27:0,78,3984	0/0:21,0:21:60.21:0,60,2705	0/0:22,0:22:66.23:0,66,3436	0/0:32,0:32:96.33:0,96,4892	0/0:20,0:20:54.18:0,54,2842	0/0:28,0:28:84.29:0,84,4262	0/0:32,0:32:90.31:0,90,4604	1/1:2,14:16:27.09:828,27,0	1/1:3,6:9:12.04:395,12,0	0/0:21,0:21:60.19:0,60,2640	0/0:34,0:34:96.33:0,96,4752	0/0:33,0:33:99:0,99,4992	0/0:18,0:18:51.16:0,51,2361	0/0:19,0:19:54.18:0,54,2567	0/0:36,0:36:99:0,105,5441	0/0:15,0:15:39.12:0,39,1911	0/0:24,0:24:72.24:0,72,3639	0/0:31,0:31:81.27:0,81,4241	0/0:14,0:14:42.08:0,42,1598
chr10	54232888	.	T	TG	4627.04	PASS	AB=0.593;AC=33;AF=0.589;AN=56;BaseQRankSum=-5.570;DP=288;FS=9.713;HRun=6;HaplotypeScore=41.2761;InbreedingCoeff=0.8975;MQ=76.83;MQ0=0;MQRankSum=-1.346;QD=28.04;ReadPosRankSum=-1.853;VQSLOD=3.9811;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,12:17:39.11:472,39,0	1/1:4,2:6:9.03:113,9,0	0/0:6,0:6:15.02:0,15,145	0/0:16,0:15:20.94:0,21,188	1/1:2,12:14:39.11:474,39,0	1/1:1,5:6:18.06:226,18,0	1/1:4,5:9:21.07:264,21,0	1/1:4,17:21:48.13:578,48,0	1/1:3,5:8:18.02:209,18,0	1/1:3,2:5:9.03:113,9,0	1/1:5,2:7:15.04:175,15,0	0/0:13,0:13:36.08:0,36,367	0/0:7,0:7:21.04:0,21,208	0/1:5,11:16:3.52:275,0,4	1/1:3,7:10:24.08:302,24,0	1/1:4,11:15:39.11:477,39,0	1/1:4,4:8:18.03:211,18,0	1/1:2,2:4:9.03:113,9,0	0/0:14,0:14:30.02:0,30,295	0/0:8,0:8:21:0,21,202	0/0:19,0:19:39.07:0,39,397	0/0:10,0:10:30.07:0,30,304	0/0:10,0:10:24.05:0,24,243	0/0:9,0:9:27.06:0,27,275	1/1:1,7:8:24.05:286,24,0	1/1:1,7:8:21.07:264,21,0	0/0:10,0:11:23.08:0,23,220	1/1:0,3:3:6.02:75,6,0
chr10	54234127	.	TTG	T	690.53	PASS	AB=0.925;AC=8;AF=0.154;AN=52;BaseQRankSum=0.734;DP=745;FS=3.757;HRun=0;HaplotypeScore=132.1223;InbreedingCoeff=0.2455;MQ=55.14;MQ0=36;MQRankSum=3.346;QD=3.99;ReadPosRankSum=1.945;VQSLOD=2.4777;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:31,10:40:98.54:112,0,99	0/0:11,0:11:3.01:0,3,39	./.	./.	0/0:26,0:26:5.73:0,6,43	0/0:25,0:22:8.48:0,8,86	0/0:22,0:21:8.92:0,9,88	0/0:32,0:30:8.48:0,8,48	0/0:28,0:28:9.25:0,9,90	0/0:22,0:21:6.65:0,7,174	0/0:14,0:14:9.31:0,9,76	0/0:21,0:20:9.44:0,9,234	0/1:15,1:16:42.97:43,0,224	0/0:14,0:14:3.84:0,4,21	0/0:27,0:27:2.01:0,2,28	0/0:15,0:21:8.52:0,9,70	1/1:14,18:31:7.11:275,7,0	1/1:17,18:33:35.43:378,35,0	0/0:26,0:22:10.72:0,11,84	0/1:18,0:26:0:0,0,0	0/0:43,0:39:21.84:0,22,189	0/0:24,0:23:25.19:0,25,293	0/1:21,1:22:9.09:9,0,286	0/0:38,0:38:33.04:0,33,886	0/0:18,0:16:2.50:0,3,19	0/0:32,0:32:23.90:0,24,221	0/0:27,0:27:8.62:0,9,211	0/0:8,0:6:2.97:0,3,20
chr10	54235217	.	A	AG	3157.49	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=4.725;DP=673;FS=4.238;HRun=2;HaplotypeScore=67.0891;InbreedingCoeff=0.9992;MQ=88.41;MQ0=1;MQRankSum=-5.409;QD=34.70;ReadPosRankSum=2.750;VQSLOD=4.2073;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,34:38:90.26:1275,90,0	0/0:8,0:8:24.08:0,24,298	0/0:30,0:30:79.69:0,80,924	0/0:22,0:22:51.13:0,51,610	0/0:26,0:26:78.24:0,78,961	0/0:27,0:27:69.20:0,69,838	0/0:27,0:27:78.24:0,78,966	0/0:34,0:34:99:0,102,1246	0/0:21,0:21:57.15:0,57,682	0/0:28,0:27:75.23:0,75,930	0/0:15,0:15:45.14:0,45,558	0/0:22,0:22:63.19:0,63,769	0/0:19,0:19:54.17:0,54,669	0/0:21,0:21:60.19:0,60,743	0/0:28,0:28:78.25:0,78,967	0/0:32,0:32:90.26:0,90,1091	1/1:3,31:34:90.30:1291,90,0	1/1:0,19:19:51.17:734,51,0	0/0:16,0:16:47.92:0,48,556	0/0:32,0:32:87.27:0,87,1078	0/0:27,0:27:72.21:0,72,878	0/0:18,0:18:54.17:0,54,666	0/0:20,0:20:60.19:0,60,743	0/0:32,0:32:90.28:0,90,1115	0/0:13,0:13:39.12:0,39,480	0/0:24,0:24:69.22:0,69,855	0/0:22,0:22:63.20:0,63,781	0/0:17,0:17:48.15:0,48,595
chr10	54236156	.	C	CT	14571.62	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-14.968;DP=591;FS=1.032;HRun=1;HaplotypeScore=56.2428;InbreedingCoeff=0.9988;MQ=81.95;MQ0=0;MQRankSum=-1.845;QD=39.70;ReadPosRankSum=4.572;VQSLOD=5.2454;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,37:37:99:1482,99,0	1/1:0,10:10:23.82:359,24,0	0/0:12,0:12:29.92:0,30,345	0/0:18,0:18:26.22:0,26,397	1/1:1,15:16:39.06:557,39,0	1/1:1,25:26:63.21:944,63,0	1/1:0,35:35:84.28:1259,84,0	1/1:1,20:21:57.16:812,57,0	1/1:1,25:26:66.22:988,66,0	1/1:0,18:18:54.18:807,54,0	1/1:0,9:9:27.09:405,27,0	0/0:27,0:27:81.25:0,81,1035	0/0:17,0:17:48.14:0,48,604	1/1:1,20:21:57.19:854,57,0	1/1:0,21:21:54.18:808,54,0	1/1:0,12:12:29.65:449,30,0	1/1:0,37:37:99:1483,99,0	1/1:0,31:31:90.30:1344,90,0	0/0:21,0:21:57.14:0,57,720	0/0:10,0:10:27.06:0,27,321	0/0:40,0:40:99:0,111,1405	0/0:23,0:23:69.10:0,69,852	0/0:15,0:15:39.11:0,39,492	0/0:28,0:28:81.22:0,81,1008	1/1:0,12:12:33.11:494,33,0	1/1:0,26:26:78.25:1128,78,0	0/0:13,0:13:39.07:0,39,485	1/1:1,8:9:27.09:398,27,0
chr10	54237051	.	G	GT	1154.38	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.570;DP=655;FS=3.226;HRun=0;HaplotypeScore=75.2250;InbreedingCoeff=0.9988;MQ=84.32;MQ0=0;MQRankSum=-8.666;QD=26.24;ReadPosRankSum=-0.076;VQSLOD=3.8388;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,19:22:27.15:537,27,0	0/0:12,0:12:36.12:0,36,504	0/0:21,0:21:60.16:0,60,817	0/0:20,0:20:57.09:0,57,734	0/0:32,0:32:96.32:0,96,1339	0/0:26,0:26:72.19:0,72,954	0/0:25,0:25:75.22:0,75,1012	0/0:37,0:37:99:0,111,1524	0/0:17,0:17:51.17:0,51,713	0/0:28,0:28:81.27:0,81,1130	0/0:21,0:21:63.21:0,63,881	0/0:27,0:27:81.27:0,81,1133	0/0:28,0:28:84.27:0,84,1156	0/0:15,0:15:45.15:0,45,629	0/0:39,0:39:99:0,114,1593	0/0:22,0:22:66.19:0,66,888	1/1:2,9:12:33.09:420,33,0	1/1:0,8:8:24.08:339,24,0	0/0:25,0:25:72.22:0,72,964	0/0:22,0:22:60.20:0,60,838	0/0:18,0:18:54.18:0,54,755	0/0:18,0:18:54.18:0,54,755	0/0:19,0:19:57.19:0,57,796	0/0:32,0:32:90.24:0,90,1218	0/0:27,0:27:81.27:0,81,1133	0/0:32,0:32:93.29:0,93,1280	0/0:31,0:30:93.29:0,93,1282	0/0:17,0:17:51.13:0,51,661
chr10	54237054	.	C	CCTAA	2871.88	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=10.339;DP=674;FS=0.579;HRun=0;HaplotypeScore=116.6091;InbreedingCoeff=0.9998;MQ=84.61;MQ0=0;MQRankSum=-10.279;QD=54.19;ReadPosRankSum=-2.837;VQSLOD=4.1685;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,17:26:56.98:1223,57,0	0/0:13,0:13:36.12:0,36,755	0/0:23,0:23:69.18:0,69,1273	0/0:20,0:20:51.01:0,51,993	0/0:31,0:31:93.32:0,93,1949	0/0:25,0:25:72.25:0,72,1501	0/0:28,0:28:84.27:0,84,1681	0/0:36,0:36:99:0,108,2214	0/0:17,0:17:51.18:0,51,1070	0/0:29,0:29:81.26:0,81,1595	0/0:22,0:22:60.20:0,60,1232	0/0:28,0:28:81.28:0,81,1675	0/0:29,0:29:84.29:0,84,1761	0/0:15,0:15:45.15:0,45,919	0/0:39,0:39:99:0,114,2385	0/0:24,0:24:66.21:0,66,1346	1/1:7,8:14:39.11:964,39,0	1/1:3,8:11:33.07:828,33,0	0/0:26,0:26:69.22:0,69,1344	0/0:21,0:21:57.20:0,57,1195	0/0:19,0:19:54.18:0,54,1107	0/0:19,0:19:57.20:0,57,1180	0/0:20,0:20:60.20:0,60,1205	0/0:31,0:31:87.30:0,87,1775	0/0:27,0:27:78.25:0,78,1593	0/0:31,0:31:93.32:0,93,1919	0/0:31,0:30:93.32:0,93,1950	0/0:17,0:17:51.17:0,51,1021
chr10	54237759	.	T	TC	13051.73	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-6.774;DP=691;FS=2.490;HRun=5;HaplotypeScore=75.4165;InbreedingCoeff=0.9982;MQ=92.02;MQ0=0;MQRankSum=-3.194;QD=32.63;ReadPosRankSum=3.675;VQSLOD=5.5163;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,45:49:99:1658,126,0	1/1:0,7:7:18.06:237,18,0	0/0:34,0:34:80.74:0,81,815	0/0:28,0:28:74.44:0,74,755	1/1:2,22:25:54.13:687,54,0	1/1:0,14:14:36.12:474,36,0	1/1:1,27:28:72.23:947,72,0	1/1:4,18:22:51.14:639,51,0	1/1:3,21:24:54.18:711,54,0	1/1:1,20:21:60.20:788,60,0	1/1:2,7:9:21.07:276,21,0	0/0:32,0:32:90.21:0,90,959	0/0:34,0:34:99:0,102,1078	1/1:1,25:26:66.21:867,66,0	1/1:2,29:31:84.27:1105,84,0	1/1:2,16:18:42.14:552,42,0	1/1:3,25:28:60.20:790,60,0	1/1:4,29:33:87.28:1145,87,0	0/0:20,0:20:57.14:0,57,608	0/0:15,0:15:42.08:0,42,435	0/0:27,0:27:69.17:0,69,741	0/0:18,0:18:41.50:0,42,402	0/0:20,0:20:54.13:0,54,578	0/0:36,0:36:99:0,99,1054	1/1:1,21:22:51.17:671,51,0	1/1:1,25:26:75.20:951,75,0	0/0:27,0:27:75.17:0,75,797	1/1:0,17:17:42.14:553,42,0
chr10	54238438	.	GT	G	2377.64	PASS	AB=0.666;AC=33;AF=0.589;AN=56;BaseQRankSum=6.014;DP=643;FS=2.595;HRun=15;HaplotypeScore=93.2755;InbreedingCoeff=0.1820;MQ=76.52;MQ0=4;MQRankSum=-1.463;QD=4.70;ReadPosRankSum=6.044;VQSLOD=2.0729;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,0:44:56.94:163,57,0	1/1:4,0:17:20.33:59,20,0	0/0:45,0:22:18.74:0,19,143	0/1:43,1:22:7.74:8,0,104	0/1:10,18:29:27.01:195,0,27	0/1:12,10:23:38.66:158,0,39	0/1:5,10:19:8.61:156,0,9	0/1:13,7:23:59:109,0,59	0/1:8,12:21:4.92:141,0,5	1/1:8,20:29:23.42:330,23,0	0/1:6,5:11:9.79:66,0,10	0/0:14,1:19:24.90:0,25,203	0/0:20,0:20:40.63:0,41,329	0/1:9,9:20:60.55:126,0,61	1/1:8,13:22:1.18:131,1,0	1/1:5,0:17:22.37:65,22,0	1/1:6,0:27:28.47:81,28,0	1/1:3,0:21:9.46:56,9,0	1/1:10,4:21:25.16:121,25,0	1/1:7,0:20:18.18:53,18,0	1/1:4,0:13:16.22:47,16,0	0/0:11,0:15:18.67:0,19,137	0/0:16,1:18:14.30:0,14,222	0/0:17,2:19:3.30:0,3,258	0/1:5,14:19:50.49:89,0,50	0/1:14,14:30:2.51:213,0,3	1/1:8,0:19:18.04:54,18,0	0/1:5,9:15:18.01:144,0,18
chr10	54238666	.	C	CT	6131.85	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-9.810;DP=667;FS=0.752;HRun=0;HaplotypeScore=65.9489;InbreedingCoeff=0.9992;MQ=81.49;MQ0=0;MQRankSum=-3.932;QD=40.88;ReadPosRankSum=4.299;VQSLOD=5.4167;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,38:39:99:1628,102,0	1/1:0,13:13:36.12:575,36,0	0/0:19,0:19:50.96:0,51,664	0/0:19,0:18:45.29:0,45,531	0/0:14,0:14:39.10:0,39,517	0/0:14,0:14:42.14:0,42,583	0/0:30,0:30:84.27:0,84,1156	0/0:32,0:32:93.27:0,93,1276	0/0:30,1:31:42.33:0,42,1144	0/0:10,0:10:30.09:0,30,405	0/0:14,0:14:39.13:0,39,545	0/0:34,0:34:99:0,102,1386	0/0:25,0:25:69.19:0,69,906	0/0:34,0:34:99:0,102,1380	0/0:21,0:21:60.20:0,60,838	1/1:0,27:27:66.23:1055,66,0	1/1:1,41:42:99:1580,99,0	1/1:1,28:29:81.28:1294,81,0	0/0:24,0:24:63.06:0,63,813	0/0:13,0:13:39.09:0,39,522	0/0:39,0:39:99:0,114,1588	0/0:16,0:16:45.15:0,45,626	0/0:17,0:17:48.15:0,48,655	0/0:33,0:33:99:0,99,1339	0/0:11,0:11:32.94:0,33,429	0/0:30,0:30:81.26:0,81,1110	0/0:29,0:29:81.24:0,81,1092	0/0:8,0:8:24.08:0,24,335
chr10	54238775	.	T	TACGG	2231.07	PASS	AB=0.642;AC=4;AF=0.071;AN=56;BaseQRankSum=9.381;DP=709;FS=0.000;HRun=0;HaplotypeScore=131.4459;InbreedingCoeff=0.4419;MQ=84.65;MQ0=0;MQRankSum=-9.436;QD=41.32;ReadPosRankSum=3.425;VQSLOD=3.5745;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:13,10:23:99:750,0,115	0/0:17,0:17:51.18:0,51,1066	0/0:20,0:20:57.20:0,57,1192	0/0:26,0:26:72.07:0,72,1368	0/0:30,0:30:90.31:0,90,1872	0/0:22,0:22:63.22:0,63,1320	0/0:36,0:36:99:0,102,2103	0/0:44,0:44:99:0,129,2598	0/0:19,0:19:57.20:0,57,1196	0/0:32,0:32:96.32:0,96,1976	0/0:22,0:22:66.22:0,66,1346	0/0:26,0:26:78.27:0,78,1610	0/0:33,0:33:96.32:0,96,1960	0/0:31,0:31:90.31:0,90,1887	0/0:36,0:36:99:0,108,2239	0/0:27,0:27:81.28:0,81,1685	0/1:5,12:16:14.91:725,0,15	1/1:2,12:14:11.24:866,11,0	0/0:29,0:29:87.29:0,87,1771	0/0:13,0:13:36.12:0,36,755	0/0:47,0:47:99:0,138,2893	0/0:21,0:21:63.22:0,63,1307	0/0:19,0:19:57.20:0,57,1182	0/0:22,0:22:60.19:0,60,1219	0/0:23,0:23:69.24:0,69,1408	0/0:34,0:34:99:0,99,2053	0/0:20,0:20:60.21:0,60,1254	0/0:6,0:6:15.05:0,15,315
chr10	54238777	.	T	TTCCCAGGG	4733.71	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=11.177;DP=721;FS=0.556;HRun=0;HaplotypeScore=187.0346;InbreedingCoeff=0.9971;MQ=84.33;MQ0=0;MQRankSum=-11.413;QD=81.62;ReadPosRankSum=4.153;VQSLOD=5.0823;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,10:24:53.89:1673,54,0	0/0:17,0:17:51.15:0,51,1367	0/0:22,0:22:57.18:0,57,1503	0/0:25,0:25:68.98:0,69,1711	0/0:29,0:29:87.30:0,87,2480	0/0:22,0:22:60.17:0,60,1689	0/0:35,0:35:99:0,102,2671	0/0:41,0:41:99:0,120,3276	0/0:19,0:19:57.20:0,57,1647	0/0:31,0:31:93.31:0,93,2609	0/0:22,0:22:63.20:0,63,1728	0/0:29,0:29:81.27:0,81,2222	0/0:35,0:35:99:0,99,2610	0/0:33,0:33:93.31:0,93,2596	0/0:36,0:36:99:0,108,3040	0/0:28,0:28:81.27:0,81,2280	1/1:4,12:15:42.14:1342,42,0	1/1:6,12:18:45.15:1719,45,0	0/0:29,0:29:85.49:0,85,2302	0/0:14,0:14:39.12:0,39,1023	0/0:50,0:50:99:0,147,3972	0/0:21,0:21:60.21:0,60,1696	0/0:19,0:19:57.20:0,57,1609	0/0:22,0:22:66.19:0,66,1644	0/0:23,0:23:69.24:0,69,1843	0/0:35,0:35:99:0,99,2701	0/0:20,0:20:57.20:0,57,1641	0/0:6,0:6:18.03:0,18,460
chr10	54238999	.	T	TC	3622.38	PASS	AB=0.588;AC=16;AF=0.286;AN=56;BaseQRankSum=6.393;DP=612;FS=2.583;HRun=8;HaplotypeScore=73.3652;InbreedingCoeff=0.8387;MQ=70.40;MQ0=0;MQRankSum=-2.912;QD=16.47;ReadPosRankSum=1.927;VQSLOD=3.9207;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:44,0:44:91.52:609,92,0	1/1:9,0:9:20.72:135,21,0	0/0:27,0:26:38.95:0,39,345	0/0:17,0:17:23.14:0,23,180	0/0:21,0:21:54.01:0,54,494	0/0:14,0:14:38.90:0,39,339	0/0:33,0:34:74.01:0,74,652	0/0:22,0:22:20.94:0,21,192	0/0:19,0:19:48.01:0,48,438	0/0:16,0:16:36.01:0,36,329	0/0:18,0:18:41.98:0,42,376	0/0:27,0:27:47.93:0,48,427	0/0:19,0:19:42.02:0,42,384	0/0:20,0:20:57.01:0,57,515	0/0:33,0:33:87.04:0,87,796	1/1:29,0:29:70.98:462,71,0	1/1:33,0:33:85.52:551,86,0	1/1:16,0:16:38.40:248,38,0	1/1:9,18:28:8.27:586,8,0	0/1:8,14:22:24.89:232,0,25	1/1:4,20:26:32.36:581,32,0	0/0:18,0:18:44.96:0,45,402	0/0:20,0:20:42:0,42,380	0/0:13,0:13:36.02:0,36,329	0/0:19,0:19:51.01:0,51,467	0/0:27,0:27:63.02:0,63,573	0/1:3,10:12:3.65:218,0,4	0/0:8,0:8:21.01:0,21,190
chr10	54239007	.	C	CT	4952.35	PASS	AB=1.000;AC=14;AF=0.250;AN=56;BaseQRankSum=-4.948;DP=578;FS=2.033;HRun=0;HaplotypeScore=65.2448;InbreedingCoeff=0.6175;MQ=68.18;MQ0=0;MQRankSum=-0.456;QD=22.51;ReadPosRankSum=4.904;VQSLOD=6.1912;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,38:41:93.28:1358,93,0	1/1:0,8:8:21.07:307,21,0	0/0:19,0:17:44.58:0,45,538	0/0:14,0:13:26.94:0,27,289	0/0:25,0:25:72.06:0,72,874	0/0:18,0:18:47.91:0,48,567	0/0:29,0:29:80.98:0,81,1032	0/0:14,0:14:27:0,27,330	0/0:17,0:17:48.15:0,48,636	0/0:19,0:19:47.95:0,48,580	0/0:14,0:14:42.13:0,42,553	0/0:21,0:21:55.91:0,56,690	0/0:15,0:15:42.14:0,42,568	0/0:19,0:19:57.19:0,57,780	0/0:33,0:33:99:0,99,1289	1/1:1,28:29:75.24:1077,75,0	1/1:1,37:38:87.29:1264,87,0	1/1:0,17:17:39.13:570,39,0	0/1:27,0:27:71.54:133,0,72	0/1:17,0:17:77.54:78,0,112	0/1:29,0:29:69.29:119,0,69	0/0:16,0:16:48.10:0,48,608	0/0:17,0:17:48.14:0,48,631	0/0:14,0:14:42.05:0,42,531	0/0:19,0:19:56.99:0,57,740	0/0:27,0:27:75.16:0,75,949	0/1:14,0:14:46.43:46,0,57	0/0:8,0:8:23.99:0,24,305
chr10	54240867	.	TC	T	3621	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=8.431;DP=739;FS=10.702;HRun=4;HaplotypeScore=91.6213;InbreedingCoeff=0.9529;MQ=77.08;MQ0=1;MQRankSum=-1.451;QD=34.16;ReadPosRankSum=0.677;VQSLOD=3.2888;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:72.14:0,72,931	0/0:10,0:10:30.10:0,30,418	0/0:43,0:35:71.58:0,72,1148	0/0:54,1:43:82.96:0,83,990	0/0:18,0:18:51.17:0,51,714	0/0:15,0:14:45.15:0,45,627	0/0:32,0:32:86.76:0,87,1168	0/0:22,0:22:60.19:0,60,820	0/0:27,0:27:78.25:0,78,1071	0/0:29,0:29:81.26:0,81,1097	0/0:17,0:17:45.13:0,45,600	0/0:30,0:30:84.27:0,84,1156	0/0:24,0:24:72.24:0,72,1008	0/0:26,0:26:69.20:0,69,928	0/0:29,0:29:81.27:0,81,1132	0/0:40,0:40:99:0,117,1619	0/0:24,0:24:72.24:0,72,1008	0/0:31,0:31:84.24:0,84,1152	1/1:0,19:19:57.15:670,57,0	1/1:1,18:19:54.17:647,54,0	1/1:2,29:31:81.25:972,81,0	0/0:35,0:35:99:0,99,1368	0/0:18,0:18:54.18:0,54,756	0/0:21,0:21:60.18:0,60,804	0/0:29,0:29:81.24:0,81,1095	0/0:31,0:31:93.31:0,93,1299	1/1:0,37:37:99:1332,111,0	0/0:1,0:1:3.01:0,3,42
chr10	54241758	.	TTCTTCC	T	8237.73	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=13.380;DP=619;FS=6.896;HRun=0;HaplotypeScore=163.2778;InbreedingCoeff=0.9931;MQ=72.86;MQ0=7;MQRankSum=-8.670;QD=28.21;ReadPosRankSum=-0.613;VQSLOD=4.1492;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,130,2836	0/0:8,0:7:21.07:0,21,673	0/0:51,0:30:55.10:0,55,1150	0/0:66,0:44:81.04:0,81,1668	1/1:0,11:11:15.81:206,16,0	1/1:1,20:21:37.39:781,37,0	1/1:1,20:21:27.05:432,27,0	1/1:4,28:32:81.39:837,81,0	1/1:1,16:17:39.13:816,39,0	1/1:8,15:23:33.93:700,34,0	1/1:2,13:15:29.07:418,29,0	0/0:23,0:23:69.20:0,69,2012	0/0:18,0:18:54.19:0,54,1811	1/1:1,17:18:32.29:543,32,0	1/1:2,20:22:21.07:416,21,0	0/0:22,0:22:66.23:0,66,2150	0/0:20,0:20:51.15:0,51,1223	0/0:15,0:15:41.62:0,42,953	1/1:12,6:18:40.16:627,40,0	1/1:3,13:16:21.60:348,22,0	1/1:17,2:19:23.71:230,24,0	0/0:21,0:21:63.19:0,63,1861	0/0:15,0:15:45.12:0,45,1276	0/0:19,0:19:48.16:0,48,1477	1/1:2,13:15:24.08:470,24,0	1/1:3,18:21:50.97:897,51,0	1/1:2,14:16:17.41:370,17,0	1/1:7,0:7:17.97:148,18,0
chr10	54242210	.	C	CCT	294.25	PASS	AB=0.969;AC=8;AF=0.143;AN=56;BaseQRankSum=5.668;DP=668;FS=9.656;HRun=0;HaplotypeScore=107.5841;InbreedingCoeff=0.2144;MQ=52.50;MQ0=57;MQRankSum=-2.839;QD=2.49;ReadPosRankSum=-0.332;VQSLOD=1.6746;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:49:17.50:0,17,71	1/1:8,0:7:1.50:4,1,0	0/0:15,0:8:18.03:0,18,216	0/0:18,0:9:15.05:0,15,199	0/0:10,0:8:6.02:0,6,84	0/0:17,0:16:42.11:0,42,547	0/0:26,0:25:9.21:0,9,569	0/0:20,0:18:51.15:0,51,683	0/0:35,0:34:87.23:0,87,1150	0/0:14,0:7:18.06:0,18,251	0/0:6,0:5:15.04:0,15,190	0/0:43,0:42:99:0,126,1747	0/0:24,0:24:72.24:0,72,1008	0/0:36,0:35:84.22:0,84,1103	0/0:32,0:31:53.68:0,54,708	0/0:31,0:29:11.04:0,11,50	0/1:35,0:34:25.12:25,0,138	0/1:22,0:22:37.60:38,0,49	0/1:22,1:13:42.90:43,0,182	1/1:5,3:7:6.02:106,6,0	0/0:42,3:36:13.63:0,14,141	0/0:16,0:14:36.12:0,36,502	0/0:9,0:6:15.05:0,15,206	0/0:55,0:55:99:0,153,2121	0/0:15,0:10:29.31:0,29,377	0/0:29,0:23:51.50:0,52,712	0/1:20,2:22:99:203,0,452	0/0:3,0:2:6.02:0,6,83
chr10	54242212	.	TCTGC	T	2971.04	PASS	AB=0.662;AC=12;AF=0.214;AN=56;BaseQRankSum=7.667;DP=673;FS=13.556;HRun=0;HaplotypeScore=111.2673;InbreedingCoeff=0.4821;MQ=52.92;MQ0=56;MQRankSum=0.137;QD=15.01;ReadPosRankSum=3.376;VQSLOD=2.2918;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,47:49:34.84:690,35,0	1/1:1,5:5:5.98:78,6,0	0/0:15,0:8:20.89:0,21,229	0/0:17,0:9:21.06:0,21,281	0/0:10,0:8:9.03:0,9,150	0/0:18,0:17:45.13:0,45,741	0/0:26,0:26:49.41:0,49,768	0/0:21,0:19:54.15:0,54,938	0/0:34,0:33:87.29:0,87,1608	0/0:14,0:7:18.06:0,18,257	0/0:6,0:5:15.05:0,15,249	0/0:43,0:42:99:0,126,2757	0/0:26,0:26:78.26:0,78,1652	0/0:36,0:35:87.28:0,87,1603	0/0:32,0:31:55.07:0,55,986	1/1:4,27:28:26.99:523,27,0	0/1:3,32:34:56.96:810,0,57	0/1:1,21:22:11.12:487,0,11	0/1:20,4:14:99:207,0,289	1/1:3,4:7:6.22:89,6,0	0/0:26,21:38:4.15:0,4,189	0/0:16,0:14:39.12:0,39,691	0/0:10,0:8:24.08:0,24,442	0/0:56,0:56:99:0,160,3627	0/0:17,0:12:31.91:0,32,449	0/0:27,0:21:52.53:0,53,1018	0/1:15,7:22:99:251,0,789	0/0:3,0:2:6.02:0,6,153
chr10	54242216	.	C	CCT	814.79	PASS	AB=0.962;AC=11;AF=0.196;AN=56;BaseQRankSum=6.014;DP=665;FS=11.586;HRun=0;HaplotypeScore=102.7264;InbreedingCoeff=0.2248;MQ=54.16;MQ0=50;MQRankSum=-1.372;QD=3.45;ReadPosRankSum=-0.877;VQSLOD=1.3501;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:50,0:48:6.63:45,0,7	1/1:6,0:5:4.78:25,5,0	0/0:11,0:8:20.89:0,21,225	0/0:12,0:8:21.06:0,21,277	0/0:10,0:8:12.01:0,12,133	0/0:17,0:16:41.35:0,41,549	0/0:26,0:25:40.98:0,41,517	0/0:21,0:19:47.34:0,47,533	0/0:34,0:33:85.47:0,85,1088	0/0:15,0:9:20.10:0,20,255	0/0:8,0:7:14.25:0,14,159	0/0:45,0:44:99:0,129,1788	0/0:31,0:31:90.29:0,90,1242	0/0:36,0:35:87.24:0,87,1158	0/0:32,0:31:50.69:0,51,685	0/1:29,1:27:1.98:28,0,2	0/1:35,0:34:35.48:73,0,35	0/1:22,0:22:23.46:27,0,23	0/1:20,1:14:99:292,0,105	1/1:4,3:7:9.03:145,9,0	0/1:40,3:36:15.63:16,0,64	0/0:15,0:13:39.12:0,39,530	0/0:11,0:9:26.29:0,26,325	0/0:58,0:58:99:0,166,2291	0/0:17,0:13:27.36:0,27,309	0/0:27,0:22:50.24:0,50,701	0/1:19,2:21:99:315,0,321	0/0:3,0:2:6.02:0,6,81
chr10	54242224	.	T	TCTGC	1579.74	PASS	AB=0.890;AC=12;AF=0.214;AN=56;BaseQRankSum=-1.445;DP=695;FS=1.869;HRun=0;HaplotypeScore=132.1219;InbreedingCoeff=-0.2926;MQ=60.08;MQ0=32;MQRankSum=-9.916;QD=4.88;ReadPosRankSum=-5.283;VQSLOD=0.0666;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:47:40.98:0,41,795	0/0:7,0:6:6.02:0,6,90	0/0:13,0:11:30.06:0,30,457	0/0:13,0:12:36.12:0,36,628	0/0:8,0:8:12.03:0,12,183	0/1:18,2:19:35.99:36,0,727	0/1:19,8:26:99:137,0,752	0/1:22,0:20:54.33:54,0,469	0/1:30,8:37:99:489,0,1153	0/0:14,0:10:27.09:0,27,439	0/0:6,0:6:13.34:0,13,259	0/0:45,0:44:99:0,126,2301	0/0:35,0:35:99:0,99,1733	0/1:30,5:35:99:364,0,1032	0/1:25,7:32:99:100,0,716	0/0:30,0:27:35.91:0,36,658	0/1:39,0:39:31.86:32,0,861	0/0:24,0:24:30.08:0,30,570	0/0:22,0:19:2.35:0,2,679	0/0:11,0:11:21.06:0,21,322	0/1:39,1:36:23.15:23,0,110	0/0:20,0:18:48.16:0,48,854	0/0:16,0:15:31.38:0,31,580	0/0:58,0:58:99:0,169,3010	0/1:17,0:13:25.72:26,0,538	0/1:22,2:22:99:131,0,742	0/1:21,3:23:99:281,0,519	0/1:2,1:2:46.38:56,0,46
chr10	54242920	.	C	CAGAT	25871.03	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=-1.258;DP=797;FS=6.828;HRun=0;HaplotypeScore=149.8302;InbreedingCoeff=0.9974;MQ=79.57;MQ0=0;MQRankSum=-8.234;QD=58.53;ReadPosRankSum=0.948;VQSLOD=6.4724;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,144,2721	0/0:6,0:6:18.06:0,18,332	0/0:34,0:34:77.89:0,78,1580	0/0:31,0:31:72.22:0,72,1275	1/1:6,15:23:24.28:646,24,0	1/1:2,20:22:42.14:1132,42,0	1/1:6,20:27:38.97:1051,39,0	1/1:14,28:42:99:2728,111,0	1/1:2,28:31:75.26:2021,75,0	1/1:6,28:36:96.27:2288,96,0	1/1:4,13:17:30.10:808,30,0	0/0:38,0:38:99:0,105,1927	0/0:35,0:35:99:0,99,1839	1/1:2,23:25:69.24:1860,69,0	1/1:1,25:28:60.21:1618,60,0	0/0:30,0:30:87.30:0,87,1652	0/0:25,0:25:72.25:0,72,1367	0/0:22,0:22:43.85:0,44,908	1/1:7,8:15:33.11:787,33,0	1/1:2,29:33:81.28:2181,81,0	1/1:5,29:36:69.24:1816,69,0	0/0:31,0:31:87.30:0,87,1628	0/0:18,0:18:51.16:0,51,935	0/0:33,0:33:54.80:0,55,1691	1/1:1,22:25:54.19:1457,54,0	1/1:8,22:30:81.28:2005,81,0	1/1:2,41:45:99:2986,111,0	1/1:0,6:6:18.06:485,18,0
chr10	54243748	.	A	ACACC	10522.54	PASS	AB=0.891;AC=28;AF=0.500;AN=56;BaseQRankSum=-7.928;DP=543;FS=8.748;HRun=0;HaplotypeScore=89.9105;InbreedingCoeff=0.7443;MQ=83.88;MQ0=0;MQRankSum=-6.837;QD=41.26;ReadPosRankSum=1.196;VQSLOD=4.6213;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,141,2450	0/0:13,0:13:39.11:0,39,736	0/0:22,0:22:60.07:0,60,1052	0/0:19,0:19:50.98:0,51,682	1/1:1,8:12:15.01:304,15,0	1/1:0,11:16:27.09:699,27,0	1/1:1,18:25:42.14:1008,42,0	1/1:2,18:25:60.12:1087,60,0	1/1:0,10:16:36.12:914,36,0	1/1:5,13:22:48.10:1035,48,0	1/1:1,8:14:27.05:658,27,0	0/0:18,0:18:51.16:0,51,947	0/0:28,0:28:84.10:0,84,1553	1/1:1,7:13:24.08:625,24,0	1/1:0,16:21:51.17:1314,51,0	0/0:24,0:24:69.19:0,69,1313	0/0:34,0:34:96.22:0,96,1738	0/0:22,0:22:66.13:0,66,1145	0/1:6,0:6:2.97:82,0,3	0/1:11,0:11:34.03:79,0,34	0/1:4,0:18:8.22:15,0,8	0/0:22,0:22:57.16:0,57,1165	0/0:6,0:6:15.03:0,15,262	0/0:26,0:26:78.19:0,78,1327	1/1:1,13:22:42.10:1058,42,0	1/1:3,9:13:30.10:700,30,0	0/1:7,0:7:25.75:89,0,26	1/1:0,11:14:33.11:857,33,0
chr10	54244448	.	ACT	A	5101.25	PASS	AB=1.000;AC=38;AF=0.679;AN=56;BaseQRankSum=-7.334;DP=613;FS=0.381;HRun=0;HaplotypeScore=95.3327;InbreedingCoeff=0.6827;MQ=67.69;MQ0=20;MQRankSum=-2.408;QD=12.72;ReadPosRankSum=1.258;VQSLOD=4.5600;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:24:22.53:315,23,0	0/1:6,0:6:5.41:54,0,5	0/0:50,0:15:32.56:0,33,314	0/0:48,0:22:52.39:0,52,549	0/0:2,11:13:4.96:0,5,22	1/1:18,0:18:14.94:217,15,0	1/1:25,0:24:62.89:517,63,0	1/1:18,0:18:42.95:376,43,0	1/1:28,0:28:1.10:330,1,0	0/1:22,0:21:12.65:338,0,13	1/1:6,0:6:11.98:98,12,0	0/0:31,0:30:78.92:0,79,908	0/0:22,0:22:51.97:0,52,629	1/1:24,0:23:3.30:303,3,0	1/1:25,0:25:17.23:370,17,0	1/1:28,0:27:21.95:322,22,0	1/1:23,0:23:22.76:171,23,0	1/1:19,0:19:9.38:215,9,0	1/1:14,0:14:40.95:334,41,0	1/1:12,0:12:8.92:69,9,0	1/1:3,34:37:12.01:154,12,0	0/0:17,0:17:33.95:0,34,367	0/0:11,0:11:21.95:0,22,277	0/0:20,0:19:42.01:0,42,466	1/1:18,0:18:23.31:208,23,0	1/1:19,0:19:29.32:368,29,0	1/1:2,23:25:1.62:226,2,0	1/1:10,0:10:0.17:119,0,0
chr10	54244449	.	C	CTGTGTG	2687.77	PASS	AB=1.000;AC=32;AF=0.571;AN=56;BaseQRankSum=-0.970;DP=624;FS=0.000;HRun=0;HaplotypeScore=148.8548;InbreedingCoeff=0.6420;MQ=66.80;MQ0=21;MQRankSum=-2.441;QD=8.43;ReadPosRankSum=-5.029;VQSLOD=0.6486;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:24:11.42:251,11,0	1/1:7,0:7:2.95:23,3,0	0/0:49,0:14:30.58:0,31,549	0/0:48,0:22:58.31:0,58,861	1/1:13,0:13:6.02:113,6,0	1/1:17,0:17:13.81:176,14,0	1/1:25,0:24:4.53:28,5,0	1/1:18,0:18:2.50:71,3,0	1/1:28,1:29:7.56:197,8,0	0/1:22,0:21:4.88:131,0,5	1/1:6,0:6:0.42:1,0,0	0/0:34,0:33:83.94:0,84,1433	0/0:23,0:23:60.19:0,60,968	1/1:23,0:24:20.46:202,20,0	1/1:24,0:24:15.08:232,15,0	1/1:25,4:27:5.50:484,5,0	0/0:9,11:27:0.39:0,0,1	1/1:18,0:18:14.34:211,14,0	0/1:14,0:14:34.33:56,0,34	0/0:1,0:12:3.44:0,3,67	0/0:36,0:37:8.37:0,8,111	0/0:19,0:19:42.10:0,42,645	0/0:11,0:11:30.09:0,30,511	0/0:20,0:19:35.45:0,35,616	1/1:18,0:18:22.31:429,22,0	1/1:20,0:20:8.06:218,8,0	0/0:24,0:25:20.60:0,21,266	1/1:10,0:10:4.87:57,5,0
chr10	54244451	.	C	CTG	1890.80	PASS	AB=0.890;AC=36;AF=0.720;AN=50;BaseQRankSum=1.879;DP=707;FS=5.185;HRun=0;HaplotypeScore=160.9503;InbreedingCoeff=0.4911;MQ=61.36;MQ0=21;MQRankSum=-2.694;QD=3.66;ReadPosRankSum=-2.591;VQSLOD=2.2468;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:29:12:130,12,0	1/1:7,0:7:5.98:47,6,0	./.	0/1:46,0:20:0:0,0,0	1/1:18,0:18:5.99:49,6,0	1/1:21,0:21:12:131,12,0	1/1:35,0:34:2.87:18,3,0	1/1:19,0:19:0.47:1,0,0	1/1:36,0:36:17.75:169,18,0	1/1:29,0:28:14.65:119,15,0	./.	0/1:34,1:34:7.92:8,0,263	0/1:20,6:27:54.13:188,0,54	1/1:31,0:30:14.39:113,14,0	1/1:30,0:30:11.98:103,12,0	1/1:33,0:31:20.72:197,21,0	1/1:25,0:25:5.98:46,6,0	1/1:20,0:20:14.89:143,15,0	./.	0/0:11,0:11:5.68:0,6,28	0/0:44,0:44:8.61:0,9,46	0/0:21,0:22:11.82:0,12,93	0/0:13,0:13:5.84:0,6,46	0/1:14,6:19:30.73:151,0,31	1/1:20,0:20:15.02:158,15,0	1/1:24,0:24:18.46:164,18,0	0/0:28,0:28:20.07:0,20,108	1/1:12,0:11:11.98:115,12,0
chr10	54245349	.	AATAG	A	2826.36	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=7.135;DP=665;FS=0.000;HRun=0;HaplotypeScore=131.3975;InbreedingCoeff=0.9752;MQ=61.89;MQ0=0;MQRankSum=-7.489;QD=35.33;ReadPosRankSum=-1.322;VQSLOD=3.3789;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:30.10:0,30,773	0/0:14,0:14:18.05:0,18,369	0/0:28,0:27:62.73:0,63,1500	0/0:10,0:10:27.09:0,27,687	0/0:37,0:36:99:0,108,2726	0/0:28,0:27:75.26:0,75,1913	0/0:13,0:13:30.10:0,30,761	0/0:47,0:47:99:0,111,2824	0/0:26,0:26:69.22:0,69,1731	0/0:25,0:25:72.25:0,72,1833	0/0:25,0:25:66.19:0,66,1601	0/0:24,0:24:66.23:0,66,1688	0/0:15,0:15:42.14:0,42,1075	0/0:18,0:18:54.19:0,54,1394	0/0:25,0:25:66.23:0,66,1742	0/0:23,0:23:24.08:0,24,621	0/0:14,0:14:21.07:0,21,523	0/0:21,0:21:17.39:0,17,898	1/1:5,6:11:21.07:373,21,0	1/1:4,24:28:66.10:1106,66,0	1/1:3,3:6:9.03:165,9,0	0/0:29,0:29:87.30:0,87,2217	0/0:34,0:34:87.30:0,87,2225	0/0:18,0:18:42.03:0,42,1095	0/0:30,0:30:78.27:0,78,1995	0/0:28,0:28:81.28:0,81,2077	1/1:14,21:35:75.26:1338,75,0	0/0:19,0:19:30.10:0,30,792
chr10	54245379	.	TGATA	T	1156.41	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=3.862;DP=624;FS=8.802;HRun=0;HaplotypeScore=166.4544;InbreedingCoeff=0.7856;MQ=57.13;MQ0=4;MQRankSum=-4.252;QD=10.81;ReadPosRankSum=0.309;VQSLOD=2.3213;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:29:11.87:172,12,0	1/1:14,0:14:12.01:153,12,0	0/0:19,0:16:9.59:0,10,595	0/0:9,0:6:15.03:0,15,263	0/0:31,0:31:81.28:0,81,2064	0/0:28,0:28:63.22:0,63,1631	0/0:16,0:16:27.08:0,27,645	0/0:46,0:45:99:0,123,2730	0/0:27,0:27:78.27:0,78,1955	0/0:29,0:28:80.84:0,81,1869	0/0:19,0:19:17.98:0,18,467	0/0:22,0:22:66.22:0,66,1624	0/0:14,0:14:42.14:0,42,1056	0/0:21,0:21:48.15:0,48,1181	0/0:20,0:20:51.16:0,51,1152	0/1:26,0:26:99:271,0,129	1/1:4,11:15:12.04:216,12,0	1/1:4,19:23:30.02:502,30,0	0/0:9,0:9:27.09:0,27,608	0/0:26,0:26:35.69:0,36,519	0/0:8,0:8:3.01:0,3,60	0/0:27,0:27:72.25:0,72,1818	0/0:23,0:23:63.20:0,63,1530	0/0:21,0:21:48.04:0,48,1190	0/0:30,0:30:72.23:0,72,1778	0/0:25,0:25:69.24:0,69,1747	0/0:27,0:27:54.17:0,54,998	0/0:20,0:20:36.12:0,36,886
chr10	54245386	.	TAGATGATA	T	1254.75	PASS	AB=0.816;AC=7;AF=0.125;AN=56;BaseQRankSum=1.629;DP=619;FS=2.755;HRun=0;HaplotypeScore=212.2391;InbreedingCoeff=0.4440;MQ=56.59;MQ0=4;MQRankSum=-5.757;QD=12.30;ReadPosRankSum=1.869;VQSLOD=2.2015;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:0,0:27:14.75:270,15,0	1/1:0,14:14:12.04:338,12,0	0/0:15,0:12:9.59:0,10,595	0/0:8,0:5:15.03:0,15,263	0/0:36,0:36:98.10:0,98,2525	0/0:24,0:24:69.22:0,69,2035	0/0:17,0:17:33.09:0,33,742	0/0:48,0:47:99:0,141,2928	0/0:26,0:26:78.27:0,78,2233	0/0:29,0:28:87.22:0,87,2304	0/0:17,0:17:21.07:0,21,761	0/0:25,0:25:75.26:0,75,2429	0/0:16,0:16:48.16:0,48,1668	0/0:17,0:17:51.16:0,51,1408	0/0:19,0:19:57.18:0,57,1430	0/1:2,24:26:99:595,0,135	0/1:12,0:13:37.72:42,0,38	0/1:22,0:22:99:146,0,194	0/0:12,0:12:32.88:0,33,631	0/0:25,0:25:35.51:0,36,417	0/0:9,0:9:3.01:0,3,60	0/0:30,0:30:84.29:0,84,2745	0/0:22,0:22:66.21:0,66,1970	0/0:22,0:22:54.06:0,54,1842	0/0:29,0:29:78.24:0,78,2054	0/0:25,0:25:75.24:0,75,1979	0/0:24,0:24:53.76:0,54,905	0/0:22,0:22:41.72:0,42,1022
chr10	54245398	.	A	AGAT	8039.87	PASS	AB=1.000;AC=31;AF=0.554;AN=56;BaseQRankSum=9.554;DP=603;FS=0.356;HRun=0;HaplotypeScore=148.8654;InbreedingCoeff=0.5730;MQ=54.36;MQ0=5;MQRankSum=4.417;QD=18.83;ReadPosRankSum=0.195;VQSLOD=4.7299;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:28:43.78:44,0,56	0/0:14,0:14:10.58:0,11,117	0/0:8,0:5:9.03:0,9,132	0/0:6,0:3:3.01:0,3,40	1/1:40,0:40:95.29:784,95,0	1/1:28,0:28:65.60:495,66,0	0/1:19,0:19:11.90:312,0,12	0/1:34,0:33:99:688,0,399	1/1:24,0:24:66.72:618,67,0	1/1:4,23:27:57.52:1239,58,0	1/1:1,17:20:17.65:350,18,0	0/0:22,0:22:63.21:0,63,1015	0/0:19,0:19:57.18:0,57,900	1/1:13,0:13:35.72:289,36,0	1/1:20,0:20:55.63:485,56,0	0/1:30,0:30:39.02:39,0,382	0/0:13,0:13:18.06:0,18,291	0/0:25,0:25:39.11:0,39,604	0/1:16,0:15:99:201,0,190	1/1:26,0:26:32.29:412,32,0	1/1:8,0:8:3.01:42,3,0	0/0:33,0:33:90.07:0,90,1391	0/0:19,0:19:57.19:0,57,900	0/0:17,0:17:36.12:0,36,592	1/1:31,0:31:67.87:724,68,0	1/1:21,0:21:11.27:595,11,0	1/1:20,0:20:36.47:354,36,0	1/1:22,0:22:36.02:369,36,0
chr10	54245401	.	TA	T	9968	PASS	AB=0.687;AC=27;AF=0.482;AN=56;BaseQRankSum=7.314;DP=603;FS=0.345;HRun=1;HaplotypeScore=121.4112;InbreedingCoeff=0.3776;MQ=54.54;MQ0=5;MQRankSum=2.208;QD=24.80;ReadPosRankSum=1.063;VQSLOD=4.7584;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:17.15:0,17,142	0/0:13,0:13:11.35:0,11,59	0/0:7,0:4:9.03:0,9,132	0/0:5,0:2:3.01:0,3,40	1/1:0,41:41:99:1463,105,0	1/1:0,27:27:72.24:1007,72,0	0/1:1,19:20:9.19:464,0,9	0/1:16,19:34:99:691,0,550	1/1:0,24:24:72.24:1007,72,0	0/1:25,2:27:99:492,0,127	1/1:18,1:19:1.21:43,1,0	0/0:22,0:22:66.22:0,66,1033	0/0:20,0:20:60.20:0,60,939	1/1:0,13:13:39.13:545,39,0	1/1:0,22:22:60.20:839,60,0	0/1:28,2:30:47.24:47,0,225	0/0:12,0:12:24.08:0,24,366	0/0:23,0:23:39.13:0,39,611	0/1:9,7:15:99:258,0,213	0/1:6,22:28:38.08:308,0,38	1/1:1,7:8:3.01:42,3,0	0/0:34,0:34:99:0,99,1501	0/0:20,0:20:60.20:0,60,934	0/0:16,0:16:36.12:0,36,571	1/1:0,28:28:72.24:1000,72,0	0/1:2,21:23:22.09:783,0,22	1/1:4,16:20:0.04:444,0,0	1/1:0,21:21:39.13:534,39,0
chr10	54245409	.	TA	T	497.68	PASS	AB=0.793;AC=3;AF=0.056;AN=54;BaseQRankSum=5.765;DP=621;FS=6.028;HRun=1;HaplotypeScore=159.0907;InbreedingCoeff=0.4848;MQ=54.07;MQ0=6;MQRankSum=-3.095;QD=10.37;ReadPosRankSum=1.039;VQSLOD=1.6938;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:26.20:0,26,310	0/0:16,0:16:20.38:0,20,191	0/0:6,0:1:3.01:0,3,40	0/0:8,0:1:3.01:0,3,44	0/0:41,0:41:99:0,114,1698	0/0:28,0:28:78.24:0,78,1184	0/0:18,0:18:42.14:0,42,649	0/0:40,0:39:99:0,117,1680	0/0:26,0:26:78.23:0,78,1169	0/0:30,0:30:90.19:0,90,1292	0/0:17,0:17:11.06:0,11,276	0/0:24,0:24:72.24:0,72,1122	0/0:23,0:23:69.23:0,69,1051	0/0:15,0:15:45.14:0,45,677	0/0:26,0:26:72.20:0,72,1067	0/0:30,0:30:42.69:0,43,443	0/0:13,0:13:27.09:0,27,410	0/0:20,0:20:42.11:0,42,630	0/0:15,0:14:42.08:0,42,546	1/1:20,5:25:14.80:312,15,0	./.	0/0:33,0:33:96.18:0,96,1451	0/0:20,0:20:60.19:0,60,911	0/0:18,0:18:42.14:0,42,656	0/0:27,0:27:78.25:0,78,1172	0/0:25,0:25:75.23:0,75,1118	0/1:17,6:23:99:286,0,174	0/0:17,0:16:45.10:0,45,621
chr10	54245431	.	GATAGATAA	G	6518.69	PASS	AB=0.998;AC=22;AF=0.393;AN=56;BaseQRankSum=-5.556;DP=660;FS=15.314;HRun=0;HaplotypeScore=217.3329;InbreedingCoeff=0.0671;MQ=57.20;MQ0=3;MQRankSum=-0.694;QD=14.78;ReadPosRankSum=-6.317;VQSLOD=0.8625;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:26:86.93:87,0,171	0/0:15,0:15:3.31:0,3,181	0/0:11,0:6:11.21:0,11,165	0/0:15,0:7:7.36:0,7,139	0/1:39,0:39:99:354,0,586	0/1:28,0:28:99:159,0,520	0/1:18,0:18:41.04:218,0,41	1/1:42,0:42:98.18:824,98,0	0/1:27,0:27:99:316,0,442	0/1:32,1:33:99:769,0,182	0/1:24,0:24:99:143,0,297	0/0:27,0:27:78.13:0,78,1796	0/0:23,0:23:69.15:0,69,1737	0/1:19,0:19:99:241,0,290	0/1:33,0:33:99:420,0,232	0/0:33,0:33:59.18:0,59,662	0/0:14,0:14:30.05:0,30,564	0/0:22,0:22:57.06:0,57,1118	1/1:12,0:12:29.81:243,30,0	1/1:19,12:31:63.87:883,64,0	1/1:14,1:15:17.98:150,18,0	0/0:27,0:27:79.08:0,79,2100	0/0:14,0:14:42.07:0,42,1055	0/0:18,0:18:48.05:0,48,1330	0/1:26,0:26:99:289,0,272	0/1:25,0:25:99:305,0,217	1/1:22,8:30:56.81:1013,57,0	0/1:13,0:12:99:105,0,139
chr10	54246034	.	T	TA	2015.56	PASS	AB=0.909;AC=9;AF=0.161;AN=56;BaseQRankSum=0.209;DP=653;FS=3.423;HRun=9;HaplotypeScore=82.5767;InbreedingCoeff=0.7898;MQ=74.79;MQ0=0;MQRankSum=1.127;QD=19.01;ReadPosRankSum=-1.837;VQSLOD=3.3700;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:56:99:0,142,1222	0/0:11,0:11:29.84:0,30,243	0/1:18,1:19:28.64:29,0,155	0/0:16,0:15:3.29:0,3,112	0/0:35,0:35:92.96:0,93,803	0/0:17,0:18:35.41:0,35,352	0/0:16,0:16:38.97:0,39,335	0/0:37,0:37:65.91:0,66,566	0/0:22,0:22:59.98:0,60,518	0/0:28,0:28:62.92:0,63,534	0/0:22,0:22:53.97:0,54,468	0/0:25,0:25:62.82:0,63,531	0/0:16,0:16:44.99:0,45,390	0/0:26,0:26:48.84:0,49,515	0/0:28,1:29:41.79:0,42,589	0/0:22,0:22:59.93:0,60,508	0/0:31,0:32:74.80:0,75,639	0/0:22,0:22:62.99:0,63,547	1/1:3,22:25:66.07:693,66,0	1/1:2,28:30:78.02:808,78,0	1/1:1,10:11:4.25:213,4,0	0/0:17,0:17:38.98:0,39,339	0/0:10,0:10:26.98:0,27,234	0/0:27,0:27:62.96:0,63,542	0/0:19,0:20:44.02:0,44,368	0/0:22,0:22:50.97:0,51,438	1/1:3,17:19:39.11:431,39,0	0/0:17,0:17:47.98:0,48,416
chr10	54246285	.	TTCTA	T	6527.38	PASS	AB=0.748;AC=24;AF=0.480;AN=50;BaseQRankSum=-1.947;DP=793;FS=0.438;HRun=0;HaplotypeScore=185.3015;InbreedingCoeff=0.6632;MQ=55.29;MQ0=15;MQRankSum=2.457;QD=16.32;ReadPosRankSum=1.540;VQSLOD=4.5826;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,1:44:19.29:0,19,335	0/0:7,0:14:23.95:0,24,267	./.	./.	1/1:16,12:27:17.27:485,17,0	1/1:17,9:25:27.84:415,28,0	1/1:11,1:11:8.99:112,9,0	./.	1/1:21,10:31:22.88:560,23,0	0/1:34,14:46:71.34:865,0,71	1/1:17,8:25:35.94:527,36,0	0/0:29,1:30:2.03:0,2,898	0/0:33,0:33:48.16:0,48,1044	0/1:26,8:34:99:315,0,125	1/1:15,11:25:32.47:416,32,0	0/0:26,0:42:24.02:0,24,330	0/0:21,4:25:21.07:0,21,487	0/1:9,7:15:60.22:83,0,60	0/0:23,0:21:27.04:0,27,425	0/0:28,0:34:29.98:0,30,330	0/0:25,0:25:21.07:0,21,342	0/0:16,0:16:36.08:0,36,723	1/1:14,17:31:36.12:554,36,0	1/1:17,11:25:12.02:185,12,0	1/1:16,14:30:54.86:869,55,0	0/1:24,16:39:0.99:705,0,1	0/0:13,0:37:14.97:0,15,197	1/1:15,10:23:30.07:436,30,0
chr10	54246399	.	CTA	C	189.80	PASS	AB=0.937;AC=7;AF=0.135;AN=52;BaseQRankSum=8.429;DP=773;FS=3.178;HRun=0;HaplotypeScore=319.7106;InbreedingCoeff=-0.0171;MQ=41.87;MQ0=37;MQRankSum=-5.108;QD=0.88;ReadPosRankSum=-0.878;VQSLOD=1.9378;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:25:33.79:0,34,469	0/0:12,0:10:3.65:0,4,149	./.	./.	0/0:52,1:51:59.36:0,59,1090	0/0:24,0:21:18.75:0,19,218	0/0:17,1:12:11.99:0,12,149	0/0:47,0:20:48.08:0,48,612	0/1:38,3:32:27.93:28,0,255	0/1:60,4:52:99:117,0,1094	0/0:29,0:28:43.60:0,44,538	0/0:33,0:28:75.24:0,75,1318	0/0:39,0:38:99:0,111,1816	0/0:35,2:32:32.70:0,33,406	0/1:30,6:30:9.45:9,0,170	0/0:31,0:28:34.41:0,34,397	0/0:16,0:9:21:0,21,257	0/0:8,0:5:3.01:0,3,58	0/0:7,0:6:12.02:0,12,151	0/0:32,0:31:37.15:0,37,481	1/1:16,0:11:0.77:1,1,0	0/0:35,0:35:99:0,100,1662	0/0:33,0:29:84.29:0,84,1433	0/0:18,0:15:26.97:0,27,472	0/0:32,3:35:35.13:0,35,440	0/1:40,2:38:30.19:30,0,1064	0/0:21,0:21:47.62:0,48,611	0/1:16,0:12:99:118,0,235
chr10	54246481	.	AT	A	546.72	PASS	AB=0.782;AC=11;AF=0.212;AN=52;BaseQRankSum=3.161;DP=455;FS=0.799;HRun=1;HaplotypeScore=156.5335;InbreedingCoeff=-0.1274;MQ=38.88;MQ0=35;MQRankSum=-0.512;QD=3.60;ReadPosRankSum=5.165;VQSLOD=0.3077;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:25:36.06:0,36,463	0/0:12,0:9:18.06:0,18,288	./.	./.	0/1:10,6:15:2.76:105,0,3	0/1:13,3:14:61.73:62,0,93	1/1:5,0:2:0.36:0,0,0	0/0:42,0:16:32.27:0,32,419	0/1:11,7:14:30.46:30,0,34	0/1:12,3:12:99:138,0,159	0/1:5,3:7:24.03:67,0,24	0/0:18,0:8:16.78:0,17,189	0/0:21,0:19:45.84:0,46,566	0/1:11,6:12:33.99:68,0,34	0/1:18,4:15:32.76:33,0,38	0/0:18,0:17:32.90:0,33,499	0/0:18,0:13:24.55:0,25,362	0/0:17,0:12:3.56:0,4,281	0/0:7,0:3:9.03:0,9,140	0/0:26,0:26:20.21:0,20,312	0/0:15,0:7:3.01:0,3,32	0/0:12,0:12:23.88:0,24,228	0/0:14,0:12:31.33:0,31,424	0/0:22,0:16:42.13:0,42,619	0/1:8,4:12:32.67:33,0,38	0/1:19,4:20:99:146,0,303	0/0:29,0:22:30.10:0,30,441	0/0:3,0:2:3.01:0,3,30
chr10	54246503	.	CTA	C	59.74	PASS	AB=0.895;AC=3;AF=0.054;AN=56;BaseQRankSum=-0.298;DP=477;FS=10.635;HRun=0;HaplotypeScore=153.4577;InbreedingCoeff=0.2904;MQ=40.64;MQ0=31;MQRankSum=0.045;QD=2.30;ReadPosRankSum=0.531;VQSLOD=1.6878;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:32:50.09:0,50,800	0/0:10,0:8:15.05:0,15,214	0/0:4,0:4:8.93:0,9,74	0/0:1,0:1:2.94:0,3,18	0/0:18,0:18:14.96:0,15,204	0/0:16,0:14:6.49:0,6,116	0/0:7,0:5:5.65:0,6,61	0/0:36,0:14:26.87:0,27,274	0/0:20,0:17:8.80:0,9,139	0/0:15,0:13:30.01:0,30,436	0/0:15,0:14:9.48:0,9,139	0/0:18,0:13:36.08:0,36,517	0/0:28,0:26:69.07:0,69,1056	0/0:13,0:10:5.67:0,6,72	0/0:26,0:22:8.84:0,9,115	0/0:20,0:19:35.65:0,36,437	0/0:20,0:16:36.11:0,36,581	0/0:12,0:10:20.42:0,20,301	1/1:6,3:4:9.03:136,9,0	0/1:15,2:16:13.01:19,0,13	0/0:14,4:11:3.01:0,3,40	0/0:18,0:17:47.95:0,48,568	0/0:19,0:18:48.15:0,48,812	0/0:25,0:19:42.59:0,43,454	0/0:13,0:13:5.93:0,6,61	0/0:15,0:14:18.35:0,18,403	0/0:18,8:23:30:0,30,301	0/0:2,0:1:3.01:0,3,42
chr10	54247565	.	TTAA	T	9075	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=7.141;DP=387;FS=3.971;HRun=0;HaplotypeScore=65.9901;InbreedingCoeff=0.9550;MQ=75.86;MQ0=4;MQRankSum=-2.538;QD=37.19;ReadPosRankSum=0.703;VQSLOD=4.9696;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:51.12:0,51,941	0/0:4,0:4:12.04:0,12,275	0/0:28,0:14:22.45:0,22,442	0/0:17,0:8:5.67:0,6,87	1/1:0,19:19:50.70:663,51,0	1/1:0,21:21:39.13:639,39,0	1/1:0,11:11:30.10:502,30,0	1/1:0,34:34:99:1416,99,0	1/1:0,10:10:27.09:437,27,0	1/1:0,14:14:42.12:630,42,0	1/1:0,15:15:45.15:688,45,0	0/0:11,0:11:33.10:0,33,702	0/0:10,0:10:30.10:0,30,652	1/1:0,6:6:15.05:240,15,0	1/1:0,14:14:27.09:454,27,0	0/0:10,0:10:30.09:0,30,631	0/0:10,0:10:30.10:0,30,676	0/0:15,0:15:45.14:0,45,929	1/1:0,14:14:42.06:577,42,0	1/1:0,9:10:27.02:399,27,0	1/1:0,7:7:14.99:204,15,0	0/0:4,0:4:12.03:0,12,236	0/0:9,0:9:27.09:0,27,604	0/0:8,0:8:24.07:0,24,488	1/1:0,14:14:27.09:455,27,0	1/1:0,26:26:78.17:1181,78,0	1/1:0,20:20:33.01:488,33,0	1/1:0,9:9:6.02:101,6,0
chr10	54248236	.	C	CT	11127.82	PASS	AB=1.000;AC=33;AF=0.589;AN=56;BaseQRankSum=15.790;DP=525;FS=5.419;HRun=5;HaplotypeScore=72.6790;InbreedingCoeff=0.9428;MQ=69.30;MQ0=0;MQRankSum=-1.717;QD=32.54;ReadPosRankSum=0.829;VQSLOD=5.4397;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:81.15:0,81,851	0/0:13,0:13:33.07:0,33,346	0/0:9,0:9:24.06:0,24,258	0/1:8,0:8:3.69:4,0,95	1/1:2,15:17:48.07:584,48,0	1/1:5,25:30:66.21:868,66,0	1/1:4,15:19:42.14:551,42,0	1/1:6,39:45:99:1536,120,0	1/1:0,13:13:33.11:432,33,0	1/1:1,19:20:54.18:711,54,0	1/1:0,17:17:42.14:551,42,0	0/0:10,0:10:27.07:0,27,290	0/0:14,0:14:33.06:0,33,345	1/1:2,12:14:36.12:473,36,0	1/1:2,14:16:33.11:433,33,0	0/0:18,0:18:51.11:0,51,540	0/0:25,0:25:69.17:0,69,741	0/0:31,0:31:87.19:0,87,925	1/1:2,18:20:57.17:729,57,0	1/1:2,25:27:66.21:868,66,0	1/1:1,10:11:30.10:391,30,0	0/0:12,0:12:33.08:0,33,355	0/0:17,0:17:48.12:0,48,515	0/0:5,0:5:12.03:0,12,129	1/1:2,24:26:72.23:947,72,0	1/1:3,21:24:66.68:859,67,0	1/1:2,25:27:72.23:937,72,0	1/1:1,6:7:21.03:254,21,0
chr10	54249668	.	AAGGGATG	A	4495.67	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=9.087;DP=675;FS=1.724;HRun=0;HaplotypeScore=175.3415;InbreedingCoeff=0.9999;MQ=85.08;MQ0=0;MQRankSum=-11.380;QD=59.94;ReadPosRankSum=0.319;VQSLOD=4.8918;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,117,4599	0/0:14,0:14:39.12:0,39,1454	0/0:25,0:25:60.04:0,60,2113	0/0:27,0:27:65.44:0,65,2140	0/0:21,0:21:60.21:0,60,2398	0/0:22,0:22:63.22:0,63,2519	0/0:28,0:28:81.28:0,81,3190	0/0:25,0:25:69.24:0,69,2653	0/0:22,0:22:60.19:0,60,2293	0/0:27,0:27:75.24:0,75,2649	0/0:16,0:16:39.12:0,39,1348	0/0:41,0:41:99:0,117,4679	0/0:36,0:36:99:0,105,4089	0/0:17,0:17:48.15:0,48,1802	0/0:30,0:30:90.31:0,90,3518	0/0:24,0:24:72.25:0,72,2880	0/0:22,0:22:60.18:0,60,2211	0/0:27,0:27:81.28:0,81,3148	1/1:4,17:21:54.18:1379,54,0	1/1:3,14:17:42.14:1088,42,0	1/1:5,12:17:32.63:632,33,0	0/0:19,0:19:54.17:0,54,1949	0/0:22,0:22:66.23:0,66,2540	0/0:25,0:25:69.24:0,69,2539	0/0:27,0:27:81.28:0,81,3097	0/0:25,0:25:66.23:0,66,2593	1/1:3,17:20:57.18:1396,57,0	0/0:17,0:17:45.15:0,45,1728
chr10	54249737	.	AT	A	2134.77	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=10.867;DP=647;FS=0.000;HRun=7;HaplotypeScore=69.0854;InbreedingCoeff=0.9988;MQ=65.04;MQ0=0;MQRankSum=-3.559;QD=23.99;ReadPosRankSum=0.599;VQSLOD=3.7707;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:35:96.27:0,96,1177	0/0:12,0:12:33.08:0,33,399	0/0:14,1:15:24.38:0,24,485	0/0:16,0:16:38.15:0,38,445	0/0:29,0:29:81.23:0,81,988	0/0:21,0:21:63.20:0,63,792	0/0:19,0:19:51.16:0,51,640	0/0:37,0:37:96.30:0,96,1196	0/0:23,0:23:63.19:0,63,779	0/0:29,0:29:81.25:0,81,1006	0/0:27,0:27:66.21:0,66,830	0/0:35,0:35:99:0,105,1316	0/0:26,0:26:63.20:0,63,793	0/0:18,0:18:54.16:0,54,666	0/0:28,0:28:84.27:0,84,1057	0/0:25,0:25:75.24:0,75,944	0/0:26,0:26:66.21:0,66,829	0/0:21,0:21:51.16:0,51,641	1/1:2,24:25:66.15:673,66,0	1/1:0,26:26:75.17:765,75,0	1/1:1,10:11:27.06:275,27,0	0/0:10,0:10:30.10:0,30,376	0/0:13,0:13:36.10:0,36,440	0/0:16,0:16:45.14:0,45,565	0/0:33,0:33:90.28:0,90,1117	0/0:31,0:31:87.24:0,87,1055	1/1:5,21:26:57.12:581,57,0	0/0:12,0:12:30.10:0,30,377
chr10	54250007	.	ATG	A	1491.56	PASS	AB=0.993;AC=23;AF=0.411;AN=56;BaseQRankSum=7.324;DP=540;FS=3.174;HRun=0;HaplotypeScore=141.3720;InbreedingCoeff=0.3249;MQ=55.31;MQ0=6;MQRankSum=0.516;QD=5.23;ReadPosRankSum=1.892;VQSLOD=3.3277;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:33.48:0,33,446	0/0:13,0:13:21.04:0,21,287	0/0:27,0:15:12.40:0,12,99	0/0:27,0:16:15.46:0,15,160	1/1:19,0:19:14.86:113,15,0	1/1:17,0:16:20.89:169,21,0	0/1:13,0:13:10.11:46,0,10	0/1:30,0:29:91.75:140,0,92	1/1:12,1:13:8.71:71,9,0	0/1:16,0:15:2.73:198,0,3	1/1:19,0:19:6.47:51,6,0	0/0:23,0:23:32.80:0,33,357	0/0:22,0:22:3.36:0,3,490	1/1:12,1:13:15.26:130,15,0	1/1:23,1:24:19.51:146,20,0	0/0:15,0:15:12.01:0,12,145	0/0:21,0:21:27.53:0,28,381	0/0:11,0:10:17.83:0,18,226	0/1:17,0:16:15.85:92,0,16	0/1:27,0:27:25.96:54,0,26	0/1:13,0:12:25.03:56,0,25	0/0:18,0:18:15.02:0,15,212	0/0:9,0:9:12.03:0,12,168	0/0:32,1:33:44.20:0,44,796	0/1:14,1:15:11.10:20,0,11	1/1:21,0:21:8.81:305,9,0	0/1:19,0:19:76.89:86,0,77	0/1:9,0:9:2.81:3,0,36
chr10	54250028	.	TGA	T	1014.34	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=4.330;DP=546;FS=0.000;HRun=0;HaplotypeScore=149.2718;InbreedingCoeff=0.4512;MQ=55.06;MQ0=17;MQRankSum=-1.637;QD=6.18;ReadPosRankSum=2.464;VQSLOD=3.1474;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:23.99:0,24,325	0/0:10,0:10:17.64:0,18,229	0/0:47,0:14:4.61:0,5,87	0/0:57,0:20:4.46:0,4,80	0/0:20,0:20:2.60:0,3,10	1/1:17,0:15:3.79:20,4,0	0/1:10,0:10:12.72:13,0,29	0/0:26,0:26:48.31:0,48,455	1/1:11,0:10:2.26:10,2,0	0/1:13,0:12:3.11:3,0,109	0/0:17,0:17:2.99:0,3,25	0/0:20,0:19:21.85:0,22,286	0/0:21,0:20:23.92:0,24,486	0/1:11,0:11:11.91:12,0,15	0/0:24,0:24:9.45:0,9,74	0/0:12,0:12:8.39:0,8,73	0/0:16,0:16:21.60:0,22,279	0/0:11,0:10:19.29:0,19,202	1/1:6,10:15:30.49:355,30,0	1/1:7,16:23:18.06:226,18,0	1/1:8,9:14:23.42:258,23,0	0/0:20,0:20:12.04:0,12,192	0/0:9,0:9:9.03:0,9,147	0/0:28,1:29:16.44:0,16,775	0/1:9,0:9:0.46:0,0,59	0/1:20,0:20:22.19:22,0,124	1/1:8,9:16:21.07:264,21,0	0/0:9,0:9:6.87:0,7,40
chr10	54250041	.	GACAGAGACCGAGAC	G	2754.86	PASS	AB=0.920;AC=29;AF=0.518;AN=56;BaseQRankSum=0.773;DP=563;FS=5.907;HRun=0;HaplotypeScore=189.6975;InbreedingCoeff=0.3157;MQ=51.74;MQ0=38;MQRankSum=-5.964;QD=10.20;ReadPosRankSum=-0.673;VQSLOD=2.2017;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:27:2.99:3,0,80	0/1:8,0:9:38.88:39,0,121	0/0:74,0:14:27.12:0,27,656	0/0:85,0:14:23.33:0,23,354	1/1:2,16:18:3.01:48,3,0	1/1:15,0:13:12.04:215,12,0	1/1:9,0:8:9.88:115,10,0	1/1:26,0:25:60.65:610,61,0	1/1:10,0:10:8.69:120,9,0	0/1:11,0:10:12.37:309,0,12	0/1:1,12:13:0:0,0,0	0/0:16,0:15:9.06:0,9,139	0/0:18,0:18:40.62:0,41,437	1/1:7,0:7:6.02:105,6,0	1/1:18,0:18:8.53:100,9,0	1/1:8,0:10:3.19:64,3,0	0/1:18,0:18:71.52:72,0,184	0/1:8,1:9:0.78:320,0,1	0/1:14,0:13:34.82:143,0,35	0/1:18,0:18:0.83:32,0,1	0/0:18,0:14:1.88:0,2,269	0/0:21,0:21:11.96:0,12,93	0/0:13,0:13:8.37:0,8,112	0/0:31,0:31:4.32:0,4,722	1/1:12,0:12:6.01:84,6,0	0/1:17,0:17:99:478,0,219	0/0:15,0:14:13.52:0,14,160	1/1:8,0:8:12.26:74,12,0
chr10	54250042	.	ACAGAGACC	A	2824.86	PASS	AB=0.992;AC=36;AF=0.667;AN=54;BaseQRankSum=4.867;DP=563;FS=5.888;HRun=0;HaplotypeScore=159.9458;InbreedingCoeff=0.0816;MQ=51.66;MQ0=39;MQRankSum=-3.327;QD=7.93;ReadPosRankSum=-0.559;VQSLOD=2.2180;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:28:43.61:44,0,148	0/1:9,0:9:41.79:42,0,135	0/0:73,0:14:37.01:0,37,533	0/0:88,0:14:23.19:0,23,282	1/1:18,0:18:2.99:24,3,0	1/1:15,0:13:12.03:137,12,0	1/1:9,0:8:6.48:59,6,0	1/1:25,0:24:35.27:332,35,0	1/1:11,0:10:9:84,9,0	1/1:11,0:10:22.44:226,22,0	./.	0/1:16,0:15:11.90:12,0,211	0/1:19,0:18:90.69:91,0,453	1/1:7,0:7:6.02:70,6,0	1/1:18,0:18:3.28:30,3,0	0/1:10,0:10:7.54:38,0,8	0/1:17,1:18:99:305,0,104	0/1:9,0:9:34.77:158,0,35	1/1:13,1:13:32.31:380,32,0	1/1:18,0:18:17.58:144,18,0	0/1:18,0:14:67.46:165,0,67	0/0:21,0:21:12.01:0,12,139	0/0:6,7:13:9.03:0,9,147	0/1:30,1:31:9.29:9,0,735	1/1:11,0:11:3.90:41,4,0	0/1:17,0:17:56.56:268,0,57	1/1:16,0:14:25.60:224,26,0	1/1:8,0:8:14.40:117,14,0
chr10	54250049	.	CCGAGACAG	C	2556.91	PASS	AB=0.975;AC=46;AF=0.885;AN=52;BaseQRankSum=-4.439;DP=527;FS=0.000;HRun=0;HaplotypeScore=143.8014;InbreedingCoeff=0.3760;MQ=51.55;MQ0=41;MQRankSum=0.415;QD=7.61;ReadPosRankSum=-0.729;VQSLOD=2.4043;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:26:12.55:231,13,0	1/1:7,0:7:13.82:148,14,0	0/0:72,0:14:23.87:0,24,271	0/0:92,0:14:13.68:0,14,181	1/1:18,0:18:1.25:3,1,0	1/1:13,0:11:11.16:58,11,0	1/1:8,0:7:5.13:24,5,0	1/1:22,0:21:31.91:240,32,0	1/1:10,0:9:5.48:24,5,0	1/1:8,0:7:11.77:75,12,0	./.	1/1:10,2:12:9.87:130,10,0	1/1:18,0:18:6.23:78,6,0	1/1:5,0:5:5.85:36,6,0	1/1:16,0:16:0.98:3,1,0	1/1:9,0:9:8.39:130,8,0	1/1:17,0:17:34.43:385,34,0	1/1:8,0:8:24.08:371,24,0	1/1:13,0:12:24.24:212,24,0	1/1:15,0:15:10.73:63,11,0	0/1:18,0:15:70.18:70,0,79	./.	1/1:12,0:12:2.92:24,3,0	1/1:30,0:30:16.87:139,17,0	1/1:9,0:9:2.98:22,3,0	0/1:13,0:13:45.93:46,0,133	1/1:14,0:13:11.51:46,12,0	1/1:10,0:10:16.46:133,16,0
chr10	54250053	.	GAC	G	545.83	PASS	AB=0.980;AC=21;AF=0.420;AN=50;BaseQRankSum=-1.255;DP=530;FS=4.830;HRun=0;HaplotypeScore=126.0328;InbreedingCoeff=0.0400;MQ=49.90;MQ0=45;MQRankSum=1.582;QD=2.05;ReadPosRankSum=0.561;VQSLOD=2.0328;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:25:14.66:109,15,0	1/1:7,0:7:11.64:86,12,0	0/1:68,0:13:7.71:8,0,96	0/0:91,0:13:10.47:0,10,88	./.	0/0:12,0:10:5.78:0,6,17	0/0:8,0:7:3.48:0,3,11	0/1:25,0:24:3.40:3,0,169	0/0:13,0:11:4.04:0,4,12	0/1:8,0:7:8.95:9,0,28	./.	0/1:11,0:9:3.85:4,0,39	0/0:19,0:18:11.21:0,11,157	0/1:5,0:5:0.23:1,0,0	0/0:17,0:17:2.65:0,3,17	1/1:9,1:9:8.38:60,8,0	0/1:15,0:15:30.59:114,0,31	1/1:9,0:9:8.50:143,9,0	0/1:12,1:12:44.21:44,0,86	0/0:15,0:15:10.57:0,11,62	0/1:19,0:15:38.67:39,0,136	./.	0/1:12,0:12:17.90:18,0,19	0/0:29,0:29:5.78:0,6,276	1/1:10,0:10:1.25:3,1,0	0/0:12,0:12:28.57:0,29,123	0/1:14,3:14:40.76:41,0,106	0/1:11,0:10:13.39:13,0,30
chr10	54250397	.	C	CTG	19238.34	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=-13.457;DP=923;FS=0.844;HRun=0;HaplotypeScore=152.8151;InbreedingCoeff=0.9973;MQ=63.18;MQ0=10;MQRankSum=-2.417;QD=37.72;ReadPosRankSum=-1.311;VQSLOD=5.7989;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:65,0:65:99:0,171,2395	0/0:9,0:9:24.08:0,24,352	0/0:33,0:29:71.72:0,72,868	0/0:37,0:23:54.08:0,54,665	1/1:6,19:23:38.95:675,39,0	1/1:3,14:17:36:583,36,0	1/1:17,26:43:99:1917,117,0	1/1:3,24:28:78.14:1179,78,0	1/1:0,28:28:60.20:1058,60,0	1/1:14,27:41:99:1954,120,0	1/1:0,19:19:15.05:274,15,0	0/0:40,0:40:96.28:0,96,1346	0/0:34,0:34:93.19:0,93,1239	1/1:3,32:35:53.46:1238,53,0	1/1:5,37:40:33.97:1322,34,0	0/0:33,0:33:90.30:0,90,1316	0/0:35,0:35:97.50:0,97,1360	0/0:32,0:32:90.19:0,90,1233	1/1:2,16:18:35.64:757,36,0	1/1:10,20:30:56.85:919,57,0	1/1:22,60:80:99:3674,222,0	0/0:36,0:36:80.26:0,80,1097	0/0:16,0:16:30.04:0,30,418	0/0:43,0:43:99:0,117,1613	1/1:1,22:24:36.02:618,36,0	1/1:18,24:41:99:1815,108,0	1/1:4,12:14:30.10:545,30,0	1/1:1,16:17:39.13:710,39,0
chr10	54250399	.	G	GT	6020.91	PASS	AB=1.000;AC=30;AF=0.536;AN=56;BaseQRankSum=13.532;DP=898;FS=0.000;HRun=1;HaplotypeScore=174.7138;InbreedingCoeff=0.8081;MQ=62.65;MQ0=10;MQRankSum=-2.484;QD=12.04;ReadPosRankSum=2.324;VQSLOD=3.5147;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:63,0:63:99:0,177,2358	0/0:9,0:9:24.08:0,24,334	0/0:29,0:25:75.12:0,75,912	0/0:35,0:23:58.72:0,59,682	1/1:24,0:22:3.94:189,4,0	1/1:15,0:15:2.09:170,2,0	1/1:43,0:43:31.28:607,31,0	1/1:29,1:30:23.80:411,24,0	1/1:26,0:26:58.68:379,59,0	1/1:40,1:41:73.77:660,74,0	0/1:19,0:18:20.30:66,0,20	0/0:38,0:38:99:0,108,1392	0/0:33,0:33:96.23:0,96,1258	1/1:35,0:34:51.48:371,51,0	0/1:43,0:41:16.49:338,0,16	0/0:33,0:33:93.31:0,93,1287	0/0:33,0:33:96.32:0,96,1330	0/0:30,0:30:90.23:0,90,1199	1/1:16,0:16:24.54:216,25,0	1/1:29,0:29:22.51:322,23,0	1/1:81,2:81:99:1198,143,0	0/0:35,0:35:83.23:0,83,1065	0/0:18,0:18:33.07:0,33,432	0/0:42,0:42:99:0,120,1557	1/1:22,0:22:35.11:204,35,0	1/1:41,1:41:49.97:526,50,0	1/1:15,0:12:29.26:170,29,0	1/1:17,0:17:16.32:195,16,0
chr10	54252836	.	T	TC	15235.94	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=19.705;DP=661;FS=12.300;HRun=1;HaplotypeScore=138.2413;InbreedingCoeff=0.9951;MQ=76.99;MQ0=0;MQRankSum=-6.406;QD=38.97;ReadPosRankSum=1.475;VQSLOD=2.8337;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:56:99:0,162,2048	0/0:4,0:4:12.04:0,12,156	0/0:15,0:15:42.13:0,42,537	0/0:23,0:23:60.06:0,60,705	1/1:2,20:22:63.10:854,63,0	1/1:1,25:26:75.20:1048,75,0	1/1:1,27:28:75.25:1084,75,0	1/1:2,22:24:69.23:991,69,0	1/1:1,18:19:51.13:714,51,0	1/1:1,28:30:81.24:1123,81,0	1/1:1,31:33:96.32:1353,96,0	0/0:30,0:30:90.28:0,90,1156	0/0:23,0:23:66.20:0,66,840	1/1:2,26:28:78.18:1081,78,0	1/1:3,33:37:99:1421,102,0	0/0:19,0:19:54.18:0,54,701	0/0:15,0:15:45.13:0,45,569	0/0:15,0:15:45.13:0,45,558	1/1:1,17:18:51.64:730,52,0	1/1:0,24:24:69.23:980,69,0	1/1:4,37:41:99:1495,105,0	0/0:17,0:17:51.17:0,51,662	0/0:20,0:20:57.17:0,57,726	0/0:33,0:33:96.31:0,96,1246	1/1:0,13:13:36.12:522,36,0	1/1:1,20:21:60.16:833,60,0	1/1:1,16:18:51.12:702,51,0	1/1:0,9:9:21.07:304,21,0
chr10	54252913	.	T	TCCC	11488.01	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=6.578;DP=487;FS=14.502;HRun=4;HaplotypeScore=147.8829;InbreedingCoeff=0.9732;MQ=60.70;MQ0=9;MQRankSum=-13.246;QD=43.03;ReadPosRankSum=-1.877;VQSLOD=2.9013;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:47.19:0,47,557	0/0:7,0:7:20.55:0,21,198	0/0:28,0:13:24.77:0,25,305	0/0:31,0:14:24:0,24,313	1/1:7,3:10:9.50:146,10,0	1/1:10,5:16:45.11:856,45,0	1/1:13,8:21:39.13:720,39,0	1/1:0,29:29:87.23:1788,87,0	1/1:15,5:20:57.15:1025,57,0	1/1:11,3:14:30.10:557,30,0	1/1:3,4:7:17.98:292,18,0	0/0:31,0:31:93.30:0,93,1399	0/0:17,0:17:42.13:0,42,625	1/1:13,8:21:48.14:885,48,0	1/1:13,3:16:39.05:642,39,0	0/0:13,0:13:35.78:0,36,429	0/0:18,0:18:47:0,47,515	0/0:10,0:10:26.12:0,26,284	1/1:11,3:14:30.10:584,30,0	1/1:17,5:22:50.34:842,50,0	1/1:7,19:26:35.81:580,36,0	0/0:6,0:6:15.05:0,15,229	0/0:14,0:14:33.09:0,33,481	0/0:23,0:23:60.20:0,60,919	1/1:6,7:13:33.07:627,33,0	1/1:9,9:18:54.19:1063,54,0	1/1:12,4:16:44.64:779,45,0	1/1:2,0:2:6.02:104,6,0
chr10	54252917	.	CA	C	3011.03	PASS	AB=0.845;AC=29;AF=0.518;AN=56;BaseQRankSum=13.395;DP=457;FS=4.622;HRun=1;HaplotypeScore=145.5421;InbreedingCoeff=0.7329;MQ=56.20;MQ0=15;MQRankSum=-11.249;QD=12.55;ReadPosRankSum=-0.466;VQSLOD=2.2963;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:50.63:0,51,617	0/0:7,0:7:21.06:0,21,251	0/0:31,0:13:9.76:0,10,401	0/0:31,0:10:26.79:0,27,346	1/1:3,6:9:9.02:92,9,0	1/1:6,9:15:5.07:181,5,0	1/1:8,9:17:17.16:283,17,0	0/1:26,0:26:11.28:84,0,11	1/1:5,14:19:37.78:450,38,0	1/1:4,8:12:26.65:260,27,0	0/1:4,2:6:2.07:28,0,2	0/0:31,0:31:93.31:0,93,1410	0/0:15,0:15:45.08:0,45,668	1/1:11,6:18:6.29:221,6,0	1/1:3,10:13:26.89:295,27,0	0/0:13,0:13:36.11:0,36,459	0/0:18,0:17:48.15:0,48,609	0/0:11,0:11:32.07:0,32,365	0/1:8,3:10:54.82:132,0,55	1/1:7,11:19:26.99:359,27,0	1/1:26,2:25:9.66:90,10,0	0/0:7,0:7:18.05:0,18,258	0/0:12,0:12:33.11:0,33,480	0/0:22,0:22:63.20:0,63,948	1/1:7,4:11:6.81:127,7,0	1/1:11,7:18:18.35:256,18,0	1/1:4,11:15:16.92:307,17,0	1/1:0,2:2:6.01:58,6,0
chr10	54252924	.	AC	A	4445.29	PASS	AB=0.844;AC=40;AF=0.714;AN=56;BaseQRankSum=9.963;DP=442;FS=10.085;HRun=2;HaplotypeScore=136.4137;InbreedingCoeff=0.7881;MQ=50.56;MQ0=16;MQRankSum=-7.231;QD=15.17;ReadPosRankSum=1.259;VQSLOD=3.8859;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,16:18:39.13:502,39,0	1/1:0,6:6:18.06:232,18,0	0/0:31,0:11:32.55:0,33,322	0/0:33,0:10:23.82:0,24,268	1/1:5,5:10:8.85:57,9,0	1/1:6,7:13:26.20:134,26,0	1/1:6,8:14:30.89:185,31,0	1/1:23,0:23:46.41:152,46,0	1/1:5,14:19:47.20:304,47,0	1/1:4,7:11:23.94:148,24,0	1/1:6,1:7:7.71:37,8,0	0/0:31,0:31:88.15:0,88,1223	0/0:15,1:16:11.74:0,12,602	1/1:12,6:18:23.24:174,23,0	1/1:3,9:12:31.40:194,31,0	1/1:0,12:12:33.11:427,33,0	1/1:0,19:18:51.17:658,51,0	1/1:1,11:12:33.11:425,33,0	0/1:7,1:7:20.36:20,0,29	1/1:9,10:19:28.98:195,29,0	1/1:24,1:22:14.92:65,15,0	0/0:5,0:5:12.04:0,12,166	0/0:10,0:10:27.09:0,27,369	0/0:23,0:23:66.22:0,66,932	1/1:7,4:11:23.57:122,24,0	1/1:10,7:16:33.25:187,33,0	1/1:4,11:15:29.33:204,29,0	0/1:3,1:4:23.40:23,0,66
chr10	54252927	.	ACCACCAC	A	4991.40	PASS	AB=0.716;AC=17;AF=0.304;AN=56;BaseQRankSum=13.186;DP=430;FS=3.295;HRun=0;HaplotypeScore=168.1669;InbreedingCoeff=-0.0991;MQ=52.44;MQ0=17;MQRankSum=-9.590;QD=26.27;ReadPosRankSum=6.083;VQSLOD=4.3130;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:36.24:0,36,803	0/0:6,0:6:16.52:0,17,268	0/0:35,0:13:37.46:0,37,552	0/0:32,0:10:21.06:0,21,426	1/1:2,5:7:8.57:179,9,0	0/1:5,4:12:99:207,0,180	0/1:6,8:14:83.32:491,0,83	0/0:22,0:22:66.09:0,66,636	0/1:6,13:20:25.37:798,0,25	0/1:3,7:10:3.65:400,0,4	0/1:4,1:5:42.28:52,0,42	0/0:30,0:30:72.90:0,73,3015	0/0:17,0:17:48.16:0,48,1556	0/1:12,6:18:99:375,0,160	1/1:2,9:11:7.41:545,7,0	0/0:12,0:12:31.03:0,31,694	0/0:20,0:19:44.99:0,45,1166	0/0:11,0:11:26.19:0,26,602	0/1:6,1:6:39.26:39,0,155	0/1:6,10:16:74.18:572,0,74	0/1:21,1:20:43.38:43,0,97	0/0:4,0:4:12.04:0,12,332	0/0:10,0:10:30.10:0,30,756	0/0:24,0:24:66.23:0,66,2285	0/1:8,4:12:99:211,0,128	0/1:10,7:16:99:382,0,117	0/1:4,11:15:63.47:591,0,63	0/1:3,1:4:99:107,0,190
chr10	54252930	.	AC	A	285.92	PASS	AB=0.974;AC=14;AF=0.250;AN=56;BaseQRankSum=13.683;DP=429;FS=2.625;HRun=2;HaplotypeScore=140.7866;InbreedingCoeff=-0.1295;MQ=52.74;MQ0=17;MQRankSum=-10.558;QD=1.67;ReadPosRankSum=5.744;VQSLOD=-0.4674;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:38:0,38,449	0/0:8,0:8:24.07:0,24,310	0/0:40,0:15:31.98:0,32,413	0/0:33,1:11:24.05:0,24,277	1/1:7,0:7:6.41:20,6,0	0/1:12,0:12:0.95:1,0,254	0/1:14,0:14:32.69:33,0,124	0/0:22,1:23:59.18:0,59,852	0/1:18,1:19:74.35:107,0,74	0/1:9,0:9:23.27:33,0,23	0/0:5,0:5:0.82:0,1,64	0/0:29,0:29:84.11:0,84,1234	0/0:16,0:16:47.37:0,47,659	0/1:18,0:18:45.48:45,0,244	0/1:11,0:11:14:63,0,14	0/0:11,0:11:29.83:0,30,394	0/0:20,0:19:52.86:0,53,661	0/0:12,0:12:35.05:0,35,412	0/0:7,0:6:11.13:0,11,198	0/1:14,1:15:42.07:42,0,89	0/1:21,0:19:0.33:0,0,144	0/0:4,0:4:12.03:0,12,156	0/0:10,0:10:30.05:0,30,387	0/0:24,1:25:66.22:0,66,964	0/1:11,0:11:8.44:8,0,177	0/1:15,0:14:20.32:20,0,181	0/1:15,0:15:54.20:54,0,87	0/1:3,0:4:1.11:1,0,80
chr10	54252933	.	AC	A	1271.17	PASS	AB=0.988;AC=15;AF=0.268;AN=56;BaseQRankSum=13.059;DP=428;FS=2.013;HRun=2;HaplotypeScore=135.6273;InbreedingCoeff=-0.1693;MQ=51.65;MQ0=18;MQRankSum=-9.290;QD=7.14;ReadPosRankSum=5.657;VQSLOD=1.0727;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:35.33:0,35,468	0/0:8,0:8:24.08:0,24,333	0/0:39,0:14:38.74:0,39,476	0/0:36,0:12:21.07:0,21,287	1/1:6,0:6:8.84:55,9,0	0/1:12,0:12:42.91:43,0,248	0/1:14,0:14:50.25:124,0,50	0/0:20,1:21:49.92:0,50,766	0/1:19,0:19:50.66:234,0,51	0/1:10,0:10:19.19:119,0,19	0/1:5,0:5:9.87:10,0,52	0/0:29,0:29:84.11:0,84,1233	0/0:17,0:17:47.36:0,47,641	0/1:17,1:18:99:108,0,214	0/1:11,0:11:2.92:156,0,3	0/0:10,0:10:30.09:0,30,414	0/0:20,0:19:50.12:0,50,670	0/0:12,0:12:32.31:0,32,409	0/0:7,0:6:1.87:0,2,173	0/1:14,1:15:82.18:150,0,82	0/1:22,1:21:24.04:24,0,139	0/0:3,0:3:9.03:0,9,131	0/0:10,0:10:24.08:0,24,342	0/0:25,0:25:66.21:0,66,948	0/1:11,0:11:51.21:51,0,175	0/1:15,0:14:99:120,0,136	0/1:14,0:14:81.20:172,0,81	0/1:5,0:5:62.82:63,0,75
chr10	54254317	.	TA	T	7636.36	PASS	AB=0.843;AC=33;AF=0.589;AN=56;BaseQRankSum=11.920;DP=603;FS=1.442;HRun=9;HaplotypeScore=71.3979;InbreedingCoeff=0.7965;MQ=87.58;MQ0=0;MQRankSum=-2.012;QD=19.73;ReadPosRankSum=0.842;VQSLOD=5.3036;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,102,1158	0/0:18,0:18:48.14:0,48,554	0/1:28,2:29:6.28:6,0,357	0/1:18,0:17:23.23:23,0,210	1/1:3,23:26:66.03:604,66,0	1/1:4,18:22:48.02:439,48,0	1/1:0,16:16:42.02:384,42,0	1/1:7,23:30:72.01:653,72,0	1/1:0,11:11:30.02:275,30,0	1/1:5,20:25:57.01:522,57,0	1/1:4,14:18:36.01:329,36,0	0/0:13,0:13:39.10:0,39,441	0/0:28,0:28:66.19:0,66,759	1/1:1,7:8:21.01:192,21,0	1/1:2,24:26:66.03:604,66,0	0/0:20,0:20:54.16:0,54,623	0/0:28,0:28:75.18:0,75,849	0/0:13,0:13:33.08:0,33,371	0/1:4,9:13:4.72:213,0,5	1/1:6,35:41:95.99:870,96,0	1/1:0,26:26:78.04:714,78,0	0/0:24,1:26:35.55:0,36,643	0/0:22,0:22:57.16:0,57,648	0/0:12,0:12:30.09:0,30,346	1/1:3,15:18:45.02:412,45,0	1/1:1,19:20:57.02:517,57,0	1/1:3,31:34:90.04:823,90,0	1/1:0,5:5:6:55,6,0
chr10	54254784	.	T	TA	3166.74	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-13.655;DP=718;FS=0.405;HRun=7;HaplotypeScore=67.3661;InbreedingCoeff=0.9954;MQ=83.87;MQ0=0;MQRankSum=-1.819;QD=26.17;ReadPosRankSum=3.250;VQSLOD=4.3678;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,38:46:82.38:1276,82,0	1/1:2,6:8:18.06:217,18,0	0/0:27,0:26:54.04:0,54,503	0/0:19,0:19:22.02:0,22,337	0/0:21,0:21:60.07:0,60,569	0/0:22,0:22:63.08:0,63,599	0/0:22,0:22:63.08:0,63,597	0/0:36,0:36:96.11:0,96,915	0/0:17,0:17:48.08:0,48,464	0/0:27,0:27:75.10:0,75,718	0/0:28,0:28:78.06:0,78,735	0/0:20,0:20:54.04:0,54,505	0/0:35,0:35:93.09:0,93,883	0/0:30,0:30:75.10:0,75,719	0/0:34,0:34:96.13:0,96,920	1/1:4,22:26:57.17:689,57,0	1/1:1,26:27:63.19:761,63,0	1/1:1,13:14:33.10:399,33,0	0/0:35,0:35:93.10:0,93,880	0/0:31,0:31:75.01:0,75,705	0/0:28,0:28:75.10:0,75,718	0/0:22,0:22:63.10:0,63,608	0/0:16,0:16:45.07:0,45,435	0/0:27,0:27:72.09:0,72,690	0/0:25,0:25:63.03:0,63,589	0/0:26,0:26:63.06:0,63,599	0/0:43,0:43:99:0,123,1188	0/0:6,0:6:18:0,18,166
chr10	54255224	.	A	AG	5802.99	PASS	AC=30;AF=0.556;AN=54;BaseQRankSum=20.386;DP=615;FS=4.542;HRun=1;HaplotypeScore=287.6330;InbreedingCoeff=0.9846;MQ=92.69;MQ0=0;MQRankSum=-19.985;QD=21.73;ReadPosRankSum=2.405;VQSLOD=4.2792;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,135,1700	0/0:9,0:9:27.09:0,27,351	0/0:32,0:32:96.15:0,96,1169	0/0:31,0:31:87.24:0,87,1080	1/1:8,5:13:35.70:300,36,0	1/1:5,7:12:35.84:298,36,0	1/1:8,6:14:35.67:255,36,0	1/1:10,0:10:29.30:210,29,0	1/1:3,12:15:41.82:335,42,0	1/1:12,14:26:74.58:628,75,0	1/1:6,14:20:26.81:383,27,0	0/0:28,0:28:81.24:0,81,1023	0/0:32,0:32:90.27:0,90,1141	1/1:6,20:26:64.20:584,64,0	1/1:13,17:30:89.57:703,90,0	0/0:28,0:28:81.26:0,81,1045	0/0:21,0:21:63.20:0,63,817	0/0:25,0:25:72.21:0,72,919	1/1:7,0:7:12.06:103,12,0	1/1:10,10:20:56.52:421,57,0	1/1:5,4:9:7.87:87,8,0	0/0:26,0:26:72.23:0,72,933	0/0:33,0:33:99:0,99,1273	0/0:37,0:37:99:0,108,1369	1/1:12,9:21:52.80:410,53,0	1/1:12,11:23:65.91:573,66,0	1/1:6,14:21:62.14:514,62,0	./.
chr10	54255225	.	G	GGA	6292.45	PASS	AC=28;AF=0.538;AN=52;BaseQRankSum=17.533;DP=502;FS=21.115;HRun=0;HaplotypeScore=204.9044;InbreedingCoeff=0.9281;MQ=101.40;MQ0=0;MQRankSum=-16.701;QD=39.83;ReadPosRankSum=6.054;VQSLOD=2.9657;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,135,2126	0/0:9,0:9:27.09:0,27,440	0/0:32,0:32:96.19:0,96,1497	0/0:31,0:31:90.28:0,90,1374	1/1:6,0:6:18.06:254,18,0	1/1:7,0:7:21.07:300,21,0	1/1:7,0:7:18.06:254,18,0	1/1:1,0:1:3:27,3,0	1/1:12,0:12:36.12:527,36,0	1/1:16,1:17:48.16:695,48,0	1/1:14,1:15:0.05:515,0,0	0/0:27,0:27:81.25:0,81,1273	0/0:32,0:32:93.28:0,93,1445	1/1:21,0:21:50.57:811,51,0	1/1:17,0:17:51.17:727,51,0	0/0:28,0:28:81.27:0,81,1306	0/0:21,0:21:63.22:0,63,1021	0/0:25,0:25:72.22:0,72,1148	./.	1/1:10,0:10:30.10:419,30,0	1/1:4,2:6:12.02:155,12,0	0/0:25,0:25:75.24:0,75,1195	0/0:33,0:33:99:0,99,1593	0/0:36,0:36:99:0,108,1731	1/1:11,0:11:30.06:402,30,0	1/1:13,0:13:39.12:553,39,0	1/1:15,0:15:45.15:653,45,0	./.
chr10	54255227	.	A	AAC	5543.62	PASS	AC=26;AF=0.520;AN=50;BaseQRankSum=17.426;DP=495;FS=24.187;HRun=0;HaplotypeScore=213.7782;InbreedingCoeff=0.9916;MQ=101.26;MQ0=0;MQRankSum=-16.839;QD=36.23;ReadPosRankSum=6.778;VQSLOD=2.9003;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,129,1994	0/0:10,0:10:27.09:0,27,440	0/0:31,0:31:93.30:0,93,1463	0/0:31,0:31:90.02:0,90,1306	1/1:1,5:6:17.99:196,18,0	1/1:0,7:7:21.07:278,21,0	1/1:1,6:7:18.06:231,18,0	./.	1/1:0,12:12:36.12:476,36,0	1/1:1,14:15:45.04:596,45,0	1/1:1,14:15:29.53:442,30,0	0/0:26,0:26:78.25:0,78,1248	0/0:30,0:30:87.30:0,87,1416	1/1:1,20:21:50.52:721,51,0	1/1:0,17:17:51.17:665,51,0	0/0:29,0:29:87.24:0,87,1344	0/0:21,0:21:63.17:0,63,976	0/0:24,0:24:72.22:0,72,1148	./.	1/1:0,10:10:30.09:373,30,0	1/1:2,4:6:12:136,12,0	0/0:26,0:26:75.26:0,75,1221	0/0:33,0:33:99:0,99,1584	0/0:36,0:36:99:0,108,1636	1/1:1,9:10:27.09:350,27,0	1/1:1,11:12:36.03:470,36,0	1/1:0,15:15:45.15:609,45,0	./.
chr10	54255231	.	G	GAA	7064.18	PASS	AC=26;AF=0.520;AN=50;BaseQRankSum=17.315;DP=481;FS=16.794;HRun=0;HaplotypeScore=204.9964;InbreedingCoeff=0.9905;MQ=99.86;MQ0=0;MQRankSum=-16.992;QD=49.06;ReadPosRankSum=6.671;VQSLOD=2.6416;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,123,1997	0/0:10,0:10:27.09:0,27,441	0/0:26,0:26:70.97:0,71,1151	0/0:32,0:32:88.33:0,88,1242	1/1:0,5:5:15.05:239,15,0	1/1:0,7:7:21.07:361,21,0	1/1:0,6:6:18.06:293,18,0	./.	1/1:0,12:12:36.12:610,36,0	1/1:0,14:14:42.14:718,42,0	1/1:0,14:14:38.16:580,38,0	0/0:30,0:30:90.31:0,90,1461	0/0:29,0:29:87.27:0,87,1367	1/1:0,20:20:59.87:962,60,0	1/1:0,17:17:51.17:858,51,0	0/0:31,0:31:90.31:0,90,1462	0/0:21,0:21:63.19:0,63,997	0/0:24,0:24:72.25:0,72,1175	./.	1/1:0,10:10:30.10:487,30,0	1/1:0,3:4:12.04:166,12,0	0/0:27,0:27:81.28:0,81,1316	0/0:34,0:34:99:0,102,1640	0/0:31,0:31:93.32:0,93,1517	1/1:0,9:9:27.09:450,27,0	1/1:1,10:11:33.11:564,33,0	1/1:0,15:15:45.15:777,45,0	./.
chr10	54255236	.	A	ATT	7049.99	PASS	AC=28;AF=0.538;AN=52;BaseQRankSum=17.068;DP=479;FS=12.549;HRun=0;HaplotypeScore=198.4636;InbreedingCoeff=0.9605;MQ=97.41;MQ0=0;MQRankSum=-16.631;QD=47.96;ReadPosRankSum=5.055;VQSLOD=3.3836;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,120,1862	0/0:10,0:10:27.09:0,27,440	0/0:25,0:25:62.23:0,62,1017	0/0:29,0:29:84.25:0,84,1277	1/1:0,5:5:10.13:117,10,0	1/1:0,7:7:20.99:330,21,0	1/1:0,6:6:18.06:308,18,0	1/1:2,0:2:3:27,3,0	1/1:0,12:12:36.12:624,36,0	1/1:0,14:14:42.14:739,42,0	1/1:0,14:14:29.60:554,30,0	0/0:30,0:30:90.29:0,90,1440	0/0:31,0:31:87.24:0,87,1351	1/1:0,20:20:60.21:1012,60,0	1/1:0,17:17:51.17:872,51,0	0/0:30,0:30:90.31:0,90,1468	0/0:22,0:22:66.23:0,66,1073	0/0:25,0:25:72.25:0,72,1174	./.	1/1:0,10:10:29.59:465,30,0	1/1:1,4:5:11.93:174,12,0	0/0:23,0:23:69.22:0,69,1094	0/0:35,0:35:99:0,105,1681	0/0:29,0:29:87.30:0,87,1417	1/1:0,9:9:27.09:464,27,0	1/1:0,11:11:33.11:584,33,0	1/1:0,15:15:45.15:781,45,0	./.
chr10	54255310	.	T	TATC	19040.46	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=17.590;DP=628;FS=19.816;HRun=0;HaplotypeScore=162.5471;InbreedingCoeff=0.9954;MQ=77.86;MQ0=0;MQRankSum=-18.776;QD=56.00;ReadPosRankSum=-3.568;VQSLOD=3.4871;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,111,1882	0/0:6,0:6:15.05:0,15,251	0/0:22,0:22:64.42:0,64,1009	0/0:18,0:18:51.14:0,51,820	1/1:4,11:15:27.09:619,27,0	1/1:2,18:20:54.19:1241,54,0	1/1:5,21:26:66.23:1499,66,0	1/1:12,17:29:75.24:1571,75,0	1/1:5,23:28:81.23:1767,81,0	1/1:8,18:27:60.21:1347,60,0	1/1:3,11:14:33.11:757,33,0	0/0:29,0:29:87.30:0,87,1484	0/0:29,0:29:84.24:0,84,1371	1/1:4,25:30:72.25:1653,72,0	1/1:3,25:29:75.26:1708,75,0	0/0:18,0:18:51.15:0,51,819	0/0:31,0:31:90.29:0,90,1501	0/0:33,0:33:96.33:0,96,1633	1/1:0,13:13:36.12:829,36,0	1/1:5,16:21:48.16:1103,48,0	1/1:2,22:24:48.03:1061,48,0	0/0:25,0:25:69.23:0,69,1154	0/0:14,0:14:42.12:0,42,664	0/0:26,0:26:78.20:0,78,1271	1/1:4,14:18:45.15:1017,45,0	1/1:5,16:21:60.16:1289,60,0	1/1:1,18:20:54.19:1235,54,0	1/1:0,5:5:15.05:345,15,0
chr10	54255533	.	TAGAGTAAATATTTAGGC	T	22868.89	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=16.774;DP=616;FS=10.672;HRun=0;HaplotypeScore=298.0734;InbreedingCoeff=0.9906;MQ=86.34;MQ0=0;MQRankSum=-15.499;QD=86.95;ReadPosRankSum=1.535;VQSLOD=3.2527;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,141,10881	0/0:9,0:9:27.09:0,27,2176	0/0:25,0:25:70.48:0,70,3721	0/0:28,0:28:61.07:0,61,2872	1/1:5,7:12:15.01:607,15,0	1/1:4,8:12:15.05:734,15,0	1/1:6,16:22:36.12:1687,36,0	1/1:12,10:22:30.02:690,30,0	1/1:4,18:22:48.13:2348,48,0	1/1:3,16:19:45.14:2049,45,0	1/1:2,7:9:21.07:1027,21,0	0/0:28,0:28:81.28:0,81,6461	0/0:34,0:34:99:0,102,7545	1/1:4,21:25:48.15:2347,48,0	1/1:5,28:33:75.26:3623,75,0	0/0:34,0:34:96.33:0,96,7780	0/0:34,0:34:93.32:0,93,7247	0/0:27,0:27:78.27:0,78,5821	1/1:4,6:10:18.04:601,18,0	1/1:4,8:12:18.06:880,18,0	1/1:4,12:16:30.10:1390,30,0	0/0:21,0:21:60.19:0,60,4169	0/0:30,0:30:80.46:0,80,6317	0/0:30,0:30:87.30:0,87,6925	1/1:3,13:16:36.12:1761,36,0	1/1:3,8:11:21.07:924,21,0	1/1:3,10:13:27.09:1321,27,0	1/1:2,7:9:18.06:881,18,0
chr10	54255704	.	GCA	G	11915.77	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=19.407;DP=601;FS=0.000;HRun=0;HaplotypeScore=135.8396;InbreedingCoeff=0.9969;MQ=84.18;MQ0=0;MQRankSum=-11.415;QD=39.33;ReadPosRankSum=0.933;VQSLOD=6.0012;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:56:99:0,166,3066	0/0:7,0:7:21.07:0,21,393	0/0:28,0:28:74.98:0,75,1222	0/0:21,0:21:49.53:0,50,886	1/1:1,23:24:63.21:927,63,0	1/1:0,12:12:30.10:441,30,0	1/1:0,28:28:75.25:1104,75,0	1/1:2,19:21:57.19:839,57,0	1/1:1,20:21:60.20:883,60,0	1/1:2,25:27:75.25:1103,75,0	1/1:0,12:12:33.11:485,33,0	0/0:29,0:29:87.30:0,87,1611	0/0:25,0:25:75.26:0,75,1391	1/1:0,19:19:54.18:794,54,0	1/1:0,28:28:78.26:1147,78,0	0/0:22,0:22:63.22:0,63,1180	0/0:15,0:15:42.14:0,42,777	0/0:18,0:18:51.14:0,51,919	1/1:2,12:15:36.12:530,36,0	1/1:1,9:10:27.09:397,27,0	1/1:2,19:21:41.90:618,42,0	0/0:26,0:26:78.27:0,78,1447	0/0:29,0:29:87.23:0,87,1509	0/0:22,0:22:66.23:0,66,1223	1/1:2,16:18:48.16:706,48,0	1/1:0,17:17:51.17:749,51,0	1/1:1,24:25:66.22:971,66,0	1/1:0,5:5:15.05:221,15,0
chr10	54255946	.	T	TA	14744.88	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=20.258;DP=683;FS=1.243;HRun=0;HaplotypeScore=143.4757;InbreedingCoeff=0.9977;MQ=88.57;MQ0=0;MQRankSum=-13.863;QD=41.89;ReadPosRankSum=-0.435;VQSLOD=4.1725;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:87.29:0,87,1216	0/0:10,0:10:30.08:0,30,388	0/0:30,0:30:79.88:0,80,901	0/0:27,0:28:78.08:0,78,1023	1/1:0,15:15:36.12:572,36,0	1/1:0,15:15:45.15:717,45,0	1/1:0,20:20:51.17:809,51,0	1/1:1,29:30:87.21:1290,87,0	1/1:0,24:24:69.24:1100,69,0	1/1:0,18:18:51.17:813,51,0	1/1:1,16:17:42.14:666,42,0	0/0:31,0:31:93.30:0,93,1284	0/0:35,0:35:99:0,102,1375	1/1:1,21:22:63.21:993,63,0	1/1:0,23:23:69.24:1101,69,0	0/0:27,0:27:78.25:0,78,1073	0/0:36,0:36:99:0,105,1427	0/0:29,0:29:87.27:0,87,1198	1/1:1,16:17:45.09:639,45,0	1/1:1,30:31:84.29:1333,84,0	1/1:2,36:38:90.22:1391,90,0	0/0:25,0:25:72.21:0,72,981	0/0:22,0:22:63.17:0,63,821	0/0:29,0:29:87.20:0,87,1139	1/1:0,27:27:72.24:1135,72,0	1/1:1,16:17:48.16:764,48,0	1/1:2,29:31:75.25:1181,75,0	1/1:2,5:7:15.05:240,15,0
chr10	54256270	.	AAC	A	11847.14	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=19.072;DP=755;FS=0.569;HRun=0;HaplotypeScore=109.4119;InbreedingCoeff=0.9846;MQ=78.69;MQ0=0;MQRankSum=-2.052;QD=38.34;ReadPosRankSum=-0.847;VQSLOD=6.4226;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,135,2465	0/0:10,0:10:30.10:0,30,550	0/0:18,0:18:39.09:0,39,617	0/0:18,0:18:43.77:0,44,764	1/1:1,25:26:48.16:687,48,0	1/1:2,21:23:60.20:860,60,0	1/1:0,28:28:72.24:1032,72,0	1/1:2,45:47:99:1852,132,0	1/1:0,27:27:75.25:1075,75,0	1/1:0,29:29:87.28:1229,87,0	1/1:0,16:16:36.12:516,36,0	0/0:37,0:37:99:0,108,1948	0/0:37,0:37:99:0,111,2028	1/1:0,26:26:75.25:1073,75,0	1/1:0,30:30:87.29:1247,87,0	0/0:21,0:21:20.23:0,20,1049	0/0:29,0:28:87.30:0,87,1574	0/0:14,0:14:39.13:0,39,715	0/0:26,0:26:75.26:0,75,1361	0/0:42,0:42:99:0,111,2021	0/0:32,0:32:93.32:0,93,1705	0/0:29,0:29:81.28:0,81,1475	0/0:29,0:29:84.29:0,84,1540	0/0:26,0:26:75.26:0,75,1375	1/1:0,21:21:60.20:859,60,0	1/1:1,33:34:93.31:1332,93,0	0/0:33,0:33:96.33:0,96,1742	1/1:0,2:2:6.02:86,6,0
chr10	54256705	.	TA	T	10869.89	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=19.447;DP=707;FS=0.000;HRun=2;HaplotypeScore=108.5400;InbreedingCoeff=0.9983;MQ=71.45;MQ0=0;MQRankSum=-6.007;QD=36.23;ReadPosRankSum=-0.162;VQSLOD=4.4647;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,141,2088	0/0:7,0:7:21.07:0,21,315	0/0:22,0:22:60.18:0,60,841	0/0:21,0:21:60.20:0,60,884	1/1:0,24:24:66.21:857,66,0	1/1:1,27:28:78.25:1012,78,0	1/1:0,24:24:60.20:778,60,0	1/1:0,34:34:99:1257,99,0	1/1:0,26:26:72.23:933,72,0	1/1:1,24:25:72.23:934,72,0	1/1:0,20:20:60.20:778,60,0	0/0:34,0:34:93.31:0,93,1392	0/0:38,0:38:99:0,114,1708	1/1:1,29:30:84.27:1089,84,0	1/1:0,21:21:63.20:817,63,0	0/0:21,0:21:63.21:0,63,932	0/0:31,0:31:93.26:0,93,1348	0/0:30,0:30:90.30:0,90,1348	0/0:20,0:20:60.18:0,60,862	0/0:30,0:30:90.30:0,90,1349	0/0:14,0:14:39.13:0,39,583	0/0:21,0:21:63.21:0,63,942	0/0:22,0:22:66.20:0,66,949	0/0:28,0:27:75.20:0,75,1078	1/1:0,30:30:75.24:974,75,0	1/1:0,32:32:93.30:1207,93,0	0/0:20,0:20:57.19:0,57,854	1/1:0,6:6:18.06:234,18,0
chr10	54256812	.	TCTAAAGAAATGACCGTCAGTGACTTGGTCTGC	T	15551.56	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=12.565;DP=620;FS=1.562;HRun=0;HaplotypeScore=486.5292;InbreedingCoeff=0.9416;MQ=88.55;MQ0=0;MQRankSum=-12.241;QD=93.68;ReadPosRankSum=4.056;VQSLOD=2.1305;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,151,17357	0/0:8,0:8:24.08:0,24,3282	0/0:27,0:27:80.64:0,81,4648	0/0:24,0:24:60.21:0,60,3700	1/1:12,12:24:30.10:2024,30,0	1/1:4,5:9:15.05:1276,15,0	1/1:9,7:16:12.04:1021,12,0	1/1:15,0:15:6.01:69,6,0	1/1:5,8:13:18.06:1533,18,0	1/1:7,8:15:21.07:1397,21,0	1/1:1,9:10:21.07:1762,21,0	0/0:38,0:38:99:0,111,13807	0/0:39,0:39:99:0,117,13869	1/1:5,12:17:30.10:2553,30,0	1/1:5,11:16:21.07:1787,21,0	0/0:29,0:29:87.30:0,87,10517	0/0:35,0:35:99:0,105,13265	0/0:20,0:20:60.21:0,60,7040	0/0:24,0:24:72.25:0,72,6167	0/0:26,0:26:78.25:0,78,8982	0/0:29,0:29:87.30:0,87,10383	0/0:22,0:22:66.20:0,66,8061	0/0:14,0:14:42.14:0,42,4852	0/0:32,0:32:93.32:0,93,11128	1/1:8,6:14:9.03:765,9,0	1/1:5,7:12:18.06:1109,18,0	0/0:36,0:36:99:0,108,13490	1/1:2,3:5:3.01:256,3,0
chr10	54257214	.	AAGGG	A	1633.24	PASS	AB=0.850;AC=17;AF=0.304;AN=56;BaseQRankSum=4.021;DP=484;FS=10.993;HRun=0;HaplotypeScore=140.0800;InbreedingCoeff=0.2352;MQ=68.99;MQ0=2;MQRankSum=-6.933;QD=10.27;ReadPosRankSum=-3.022;VQSLOD=1.9837;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:78.21:0,78,1824	0/0:5,0:5:15.04:0,15,345	0/1:17,0:14:3.96:4,0,456	0/0:22,0:21:43.44:0,43,754	0/1:12,1:13:15.93:145,0,16	0/1:6,5:11:11.24:29,0,11	1/1:19,0:19:41.66:320,42,0	0/1:19,0:17:45.66:204,0,46	1/1:11,1:12:4.48:196,4,0	0/1:9,0:9:33.79:157,0,34	1/1:3,1:4:8.96:99,9,0	0/0:23,0:23:66.08:0,66,1606	0/0:24,0:24:66.22:0,66,1554	1/1:9,1:10:8.98:143,9,0	0/1:3,9:12:16.90:28,0,17	0/0:24,0:23:65.95:0,66,1412	0/0:27,0:26:44.59:0,45,1429	0/0:31,0:31:65.14:0,65,1805	0/0:13,0:11:30.05:0,30,679	0/0:22,0:22:60.15:0,60,1398	0/0:34,0:34:64.19:0,64,1769	0/0:11,0:11:30.10:0,30,790	0/0:14,0:14:39.12:0,39,913	0/0:23,0:23:66.14:0,66,1479	0/1:7,2:9:6.73:131,0,7	0/1:10,12:22:24.92:335,0,25	0/0:22,0:22:66.09:0,66,1504	0/1:2,0:2:14.98:15,0,35
chr10	54257217	.	G	GAA	1069.25	PASS	AB=0.894;AC=12;AF=0.214;AN=56;BaseQRankSum=6.595;DP=475;FS=12.392;HRun=0;HaplotypeScore=129.2530;InbreedingCoeff=-0.0630;MQ=62.36;MQ0=3;MQRankSum=-4.300;QD=7.75;ReadPosRankSum=0.888;VQSLOD=2.8457;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:78.21:0,78,1195	0/0:5,0:5:15.04:0,15,221	0/0:13,0:10:29.52:0,30,398	0/0:20,0:18:18.42:0,18,589	0/1:10,3:13:47.25:63,0,47	1/1:5,5:10:18.03:187,18,0	0/1:14,5:19:61.57:233,0,62	0/1:20,0:18:30.48:30,0,267	0/1:11,0:11:54.09:54,0,93	0/1:8,0:8:57.08:57,0,78	0/1:2,1:3:13.47:40,0,13	0/0:23,0:23:66.21:0,66,1040	0/0:22,0:22:66.21:0,66,1052	0/1:9,1:10:16.73:139,0,17	0/1:12,1:13:41.84:42,0,77	0/0:24,0:23:63.20:0,63,986	0/0:28,0:27:77.82:0,78,1099	0/0:31,0:31:81.22:0,81,1265	0/0:15,0:13:30.05:0,30,437	0/0:22,0:22:60.20:0,60,976	0/0:32,0:32:78.13:0,78,1250	0/0:11,0:11:30.10:0,30,489	0/0:15,0:15:39.12:0,39,612	0/0:23,0:23:66.21:0,66,1051	0/1:10,1:11:62.83:115,0,63	0/1:16,4:20:59.48:265,0,59	0/0:22,0:22:66.19:0,66,1016	0/0:3,0:2:5.91:0,6,65
chr10	54257218	.	G	GGA	929.12	PASS	AB=0.887;AC=12;AF=0.214;AN=56;BaseQRankSum=7.647;DP=469;FS=11.932;HRun=0;HaplotypeScore=129.2842;InbreedingCoeff=-0.0445;MQ=62.24;MQ0=3;MQRankSum=-5.777;QD=6.78;ReadPosRankSum=2.103;VQSLOD=2.3909;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:72.24:0,72,1167	0/0:5,0:5:15.05:0,15,240	0/0:13,0:10:28.77:0,29,370	0/0:20,0:18:29.90:0,30,568	0/1:10,3:13:41.31:41,0,67	1/1:5,5:10:18.03:187,18,0	0/1:14,5:19:54.11:233,0,54	0/1:20,0:18:8.08:8,0,212	0/1:11,0:11:53.99:54,0,96	0/1:7,0:7:17.15:17,0,98	0/1:2,1:3:13.50:40,0,13	0/0:22,0:22:63.08:0,63,991	0/0:22,0:22:63.21:0,63,1025	0/1:8,1:10:10.05:121,0,10	0/1:12,1:13:42.16:42,0,68	0/0:24,0:23:66.16:0,66,999	0/0:28,0:27:77.67:0,78,1070	0/0:31,0:31:78.22:0,78,1239	0/0:13,0:11:26.35:0,26,411	0/0:22,0:22:60.20:0,60,967	0/0:32,0:32:78.13:0,78,1249	0/0:11,0:11:30.10:0,30,489	0/0:15,0:15:39.13:0,39,631	0/0:23,0:23:66.20:0,66,1048	0/1:10,1:11:67.11:115,0,67	0/1:16,4:20:70.18:226,0,70	0/0:21,0:21:63.21:0,63,1009	0/0:3,0:2:5.91:0,6,65
chr10	54257261	.	GAAGTAAGT	G	6028.39	PASS	AB=1.000;AC=34;AF=0.630;AN=54;BaseQRankSum=-11.290;DP=429;FS=1.034;HRun=0;HaplotypeScore=209.5393;InbreedingCoeff=-0.3793;MQ=42.01;MQ0=1;MQRankSum=-0.359;QD=14.35;ReadPosRankSum=-10.915;VQSLOD=1.1076;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:19,0:19:29.72:120,0,30	1/1:8,0:8:16.24:171,16,0	0/0:3,0:1:3.01:0,3,49	./.	0/1:8,0:7:14.85:38,0,15	0/1:17,0:17:12.29:92,0,12	1/1:16,0:15:10.66:202,11,0	1/1:26,0:26:60.01:515,60,0	0/1:13,0:13:99:126,0,112	0/1:16,0:15:79.28:79,0,109	0/0:5,0:5:0.72:0,1,20	0/1:26,0:26:99:416,0,103	0/1:16,0:16:43.20:343,0,43	0/1:13,0:12:24.63:55,0,25	0/1:15,0:15:92.84:165,0,93	0/1:22,0:22:99:177,0,271	1/1:26,0:25:39.87:459,40,0	1/1:23,0:22:0.88:306,1,0	1/1:5,15:19:47.84:444,48,0	1/1:17,0:17:21.74:409,22,0	1/1:34,0:34:84.07:760,84,0	0/1:8,0:8:71.20:145,0,71	0/1:11,0:11:69.69:163,0,70	0/1:17,0:17:83.03:83,0,200	0/1:8,0:8:25.44:25,0,72	0/1:14,0:14:33.43:168,0,33	1/1:21,0:21:44.88:543,45,0	0/1:6,0:6:23.82:24,0,99
chr10	54257264	.	GTAA	G	210.91	PASS	AB=0.943;AC=8;AF=0.148;AN=54;BaseQRankSum=-3.659;DP=404;FS=1.835;HRun=0;HaplotypeScore=179.8948;InbreedingCoeff=-0.0070;MQ=42.27;MQ0=1;MQRankSum=5.398;QD=1.54;ReadPosRankSum=-3.287;VQSLOD=1.4381;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:19.52:0,20,237	0/1:8,0:8:0.77:1,0,22	0/0:3,0:1:3.01:0,3,60	./.	0/0:8,0:7:10.55:0,11,85	0/0:13,0:13:21.19:0,21,216	0/0:12,0:11:26.16:0,26,194	0/0:21,0:21:40.52:0,41,260	0/0:13,0:13:34.15:0,34,318	0/0:16,0:15:33.29:0,33,276	0/0:5,0:5:11.94:0,12,111	0/1:25,0:25:9.11:9,0,270	0/1:16,0:16:22.63:23,0,122	0/0:12,0:11:17.53:0,18,202	0/0:14,0:14:34.64:0,35,297	0/0:22,0:22:39.52:0,40,468	0/0:25,0:24:28.35:0,28,260	0/0:20,0:19:16.58:0,17,186	0/1:17,1:17:13.03:13,0,93	0/1:11,6:17:20.64:103,0,21	0/1:32,1:33:21.36:21,0,103	0/0:8,0:8:1.98:0,2,84	0/0:11,0:11:1.99:0,2,140	0/0:17,0:17:29.33:0,29,320	0/0:8,0:8:17.06:0,17,179	0/0:12,0:12:21.46:0,21,162	1/1:11,9:20:1.97:161,2,0	0/0:6,0:6:15.84:0,16,152
chr10	54257434	.	G	GTC	7994.18	PASS	AB=0.556;AC=23;AF=0.411;AN=56;BaseQRankSum=-14.502;DP=633;FS=9.964;HRun=0;HaplotypeScore=84.7060;InbreedingCoeff=0.8974;MQ=74.13;MQ0=0;MQRankSum=-0.249;QD=34.31;ReadPosRankSum=0.428;VQSLOD=6.5347;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,117,1418	0/0:14,0:14:27.03:0,27,299	0/0:23,0:23:51.09:0,51,608	0/0:20,0:20:23.73:0,24,370	1/1:2,19:21:41.69:697,42,0	1/1:4,9:13:15.05:249,15,0	1/1:6,22:28:23.53:910,24,0	1/1:5,22:27:66.21:1072,66,0	1/1:8,13:21:19.24:577,19,0	1/1:2,18:20:54.18:890,54,0	1/1:3,8:11:21.07:335,21,0	0/0:18,0:18:45.14:0,45,568	0/0:25,0:25:69.22:0,69,870	1/1:8,25:33:66.23:1095,66,0	1/1:4,26:30:69.24:1145,69,0	0/0:24,0:25:66.03:0,66,796	0/0:32,0:32:87.28:0,87,1096	0/0:26,0:26:72.15:0,72,861	0/0:31,0:32:84.01:0,84,977	0/0:22,0:22:51.16:0,51,643	0/0:26,0:26:75.23:0,75,932	0/0:21,0:21:48.13:0,48,581	0/0:14,0:14:33.10:0,33,404	0/0:29,0:29:84.27:0,84,1059	0/1:2,7:10:19.80:231,0,20	1/1:3,15:18:45.15:741,45,0	0/0:28,0:26:63.19:0,63,781	1/1:0,1:1:3.01:50,3,0
chr10	54257678	.	GT	G	12297.44	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=16.214;DP=801;FS=0.266;HRun=1;HaplotypeScore=75.9570;InbreedingCoeff=0.9854;MQ=82.97;MQ0=0;MQRankSum=-3.656;QD=38.55;ReadPosRankSum=1.089;VQSLOD=5.3985;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,144,2136	0/0:13,0:13:39.13:0,39,622	0/0:28,0:28:78.20:0,78,1148	0/0:26,0:26:71.04:0,71,1080	1/1:0,31:31:93.31:1288,93,0	1/1:0,20:20:51.17:713,51,0	1/1:0,35:35:84.28:1174,84,0	1/1:0,31:31:93.26:1227,93,0	1/1:0,21:21:57.19:794,57,0	1/1:0,37:37:99:1505,111,0	1/1:0,15:15:39.13:543,39,0	0/0:33,0:33:99:0,99,1558	0/0:36,0:36:99:0,105,1611	1/1:0,36:36:96.32:1341,96,0	1/1:0,31:31:87.29:1216,87,0	0/0:27,0:27:81.28:0,81,1289	0/0:44,0:44:99:0,129,1959	0/0:18,0:18:51.15:0,51,780	0/0:20,0:20:60.20:0,60,938	0/0:26,0:26:72.25:0,72,1145	0/0:43,0:43:99:0,129,1958	0/0:31,0:31:90.29:0,90,1414	0/0:25,0:25:75.26:0,75,1197	0/0:36,0:36:99:0,105,1623	1/1:0,24:24:66.22:922,66,0	1/1:0,36:36:99:1490,108,0	0/0:28,0:28:84.26:0,84,1292	1/1:0,2:2:6.02:84,6,0
chr10	54258437	.	ATGTG	A	241.30	PASS	AB=1.000;AC=17;AF=0.370;AN=46;BaseQRankSum=3.317;DP=651;FS=9.394;HRun=0;HaplotypeScore=107.0342;InbreedingCoeff=0.5164;MQ=63.80;MQ0=12;MQRankSum=0.086;QD=0.98;ReadPosRankSum=-0.761;VQSLOD=1.0772;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:43,0:43:2.98:21,3,0	1/1:9,2:12:6.01:73,6,0	./.	./.	./.	0/0:23,0:22:9.03:0,9,194	0/0:31,0:31:15.96:0,16,246	0/0:29,0:28:1.25:0,1,3	1/1:19,4:23:6.02:91,6,0	0/0:28,0:28:18.05:0,18,351	0/0:18,0:18:8.80:0,9,130	0/0:27,0:27:7.57:0,8,131	0/0:18,0:18:3.48:0,3,65	0/0:26,0:26:0:0,0,0	0/0:23,0:23:11.78:0,12,190	1/1:25,4:29:3.43:46,3,0	./.	0/0:18,0:16:0.44:0,0,1	1/1:18,0:18:3:28,3,0	1/1:18,0:21:6.01:56,6,0	1/1:42,0:40:6.01:56,6,0	0/0:17,0:17:15:0,15,255	0/1:16,0:15:0.01:0,0,0	0/1:28,0:28:5.57:6,0,393	0/0:21,0:21:5.60:0,6,145	0/0:30,0:28:9.50:0,10,144	0/1:12,0:12:0.04:0,0,0	./.
chr10	54260706	.	C	CA	7988.35	PASS	AB=0.576;AC=23;AF=0.411;AN=56;BaseQRankSum=-10.196;DP=662;FS=13.928;HRun=8;HaplotypeScore=65.4368;InbreedingCoeff=0.9294;MQ=84.93;MQ0=0;MQRankSum=-2.184;QD=27.17;ReadPosRankSum=0.377;VQSLOD=4.2794;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:75:0,75,677	0/0:12,0:12:27.01:0,27,247	0/0:24,0:24:46.27:0,46,398	0/0:18,0:18:34.69:0,35,254	1/1:5,24:29:72.21:831,72,0	0/1:5,14:19:12.80:373,0,13	1/1:2,20:22:26.70:561,27,0	1/1:5,24:29:72.19:808,72,0	1/1:1,24:25:63.19:727,63,0	1/1:4,21:25:66.13:734,66,0	1/1:3,23:26:57.13:643,57,0	0/0:35,0:35:93.03:0,93,847	0/0:22,0:22:60.03:0,60,549	1/1:3,20:23:54.16:623,54,0	1/1:4,33:37:96.29:1108,96,0	0/0:27,0:27:74.97:0,75,669	0/0:23,0:23:63.01:0,63,571	0/0:16,0:16:48.03:0,48,439	0/0:17,0:17:42.01:0,42,384	0/0:31,0:31:84.04:0,84,765	0/0:19,0:19:48.03:0,48,439	0/0:25,0:25:75.04:0,75,686	0/0:19,0:19:45.02:0,45,412	0/0:25,0:25:71.87:0,72,623	1/1:4,22:26:54.16:623,54,0	1/1:4,19:24:35.55:645,36,0	0/0:28,0:28:75:0,75,677	1/1:0,9:9:27.08:312,27,0
chr10	54261439	.	T	TC	13067.27	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-16.760;DP=696;FS=0.282;HRun=1;HaplotypeScore=60.6179;InbreedingCoeff=0.9989;MQ=84.24;MQ0=0;MQRankSum=-1.211;QD=44.00;ReadPosRankSum=1.764;VQSLOD=4.9177;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,108,1456	0/0:16,0:16:48.16:0,48,671	0/0:22,0:22:66.21:0,66,894	0/0:19,0:19:47.65:0,48,600	1/1:1,17:18:48.16:766,48,0	1/1:0,30:30:84.29:1342,84,0	1/1:0,27:28:66.22:1046,66,0	1/1:0,39:39:99:1799,117,0	1/1:0,22:22:60.20:958,60,0	1/1:1,26:27:78.27:1245,78,0	1/1:1,15:16:45.03:660,45,0	0/0:27,0:27:81.15:0,81,1090	0/0:20,0:20:60.19:0,60,824	1/1:1,26:27:72.24:1139,72,0	1/1:0,26:26:75.26:1197,75,0	0/0:23,0:23:69.23:0,69,964	0/0:34,0:34:96.28:0,96,1305	0/0:29,0:29:87.26:0,87,1180	0/0:25,0:25:75.24:0,75,1017	0/0:18,0:18:54.16:0,54,721	0/0:34,0:34:99:0,99,1388	0/0:18,0:18:54.18:0,54,748	0/0:16,0:16:48.16:0,48,665	0/0:31,0:31:93.30:0,93,1273	1/1:0,20:20:60.20:955,60,0	1/1:0,35:35:99:1673,105,0	0/0:30,0:30:90.28:0,90,1240	1/1:0,9:9:18.06:287,18,0
chr10	54261715	.	TG	T	9931.44	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=19.869;DP=768;FS=3.140;HRun=1;HaplotypeScore=105.6455;InbreedingCoeff=0.9998;MQ=83.56;MQ0=0;MQRankSum=-0.969;QD=36.25;ReadPosRankSum=-1.788;VQSLOD=4.2057;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:68,0:68:99:0,202,2895	0/0:9,0:9:27.06:0,27,353	0/0:19,0:19:57.13:0,57,739	0/0:25,0:25:47.25:0,47,761	1/1:0,23:23:66.02:811,66,0	1/1:0,18:18:45.15:626,45,0	1/1:0,33:33:78.26:1088,78,0	1/1:0,28:28:81.19:1026,81,0	1/1:0,17:17:39.13:544,39,0	1/1:0,25:26:75.14:958,75,0	1/1:1,13:14:42:536,42,0	0/0:39,0:39:99:0,117,1644	0/0:31,0:31:93.26:0,93,1299	1/1:1,25:26:31.39:955,31,0	1/1:0,29:29:81.27:1130,81,0	0/0:28,0:28:84.24:0,84,1169	0/0:40,0:40:99:0,120,1715	0/0:28,0:28:81.23:0,81,1161	0/0:23,0:23:66.15:0,66,903	0/0:38,0:38:99:0,114,1626	0/0:25,0:25:72.20:0,72,1009	0/0:33,0:33:99:0,99,1386	0/0:23,0:23:69.21:0,69,987	0/0:37,0:37:99:0,111,1582	1/1:0,18:18:48.63:670,49,0	1/1:0,28:28:84.19:1087,84,0	0/0:28,0:28:84.18:0,84,1125	1/1:0,14:14:36.12:499,36,0
chr10	54262392	.	TGTGC	T	2186.21	PASS	AB=1.000;AC=32;AF=0.571;AN=56;BaseQRankSum=3.377;DP=379;FS=130.322;HRun=0;HaplotypeScore=82.9341;InbreedingCoeff=0.7713;MQ=75.23;MQ0=0;MQRankSum=-3.506;QD=20.82;ReadPosRankSum=-6.280;VQSLOD=0.3175;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:57.60:0,58,1006	0/0:8,0:8:21.07:0,21,377	0/0:35,0:32:96.19:0,96,2413	0/0:26,0:26:69.24:0,69,1837	0/1:2,0:2:0:0,0,0	1/1:3,0:3:8.88:60,9,0	1/1:12,0:12:31.17:384,31,0	1/1:0,18:18:53.95:605,54,0	1/1:1,0:1:3.01:51,3,0	1/1:3,0:3:8.99:120,9,0	1/1:3,0:3:2.98:21,3,0	0/0:35,0:35:99:0,105,2851	0/0:37,0:37:99:0,111,3028	1/1:3,0:3:8.92:76,9,0	1/1:6,0:6:17.93:156,18,0	0/1:19,0:19:14.55:15,0,855	0/0:32,0:32:66.68:0,67,1438	0/0:9,0:9:26.56:0,27,410	1/1:0,7:7:21.02:266,21,0	1/1:0,7:7:6.02:77,6,0	1/1:6,0:6:6.01:76,6,0	0/0:19,0:19:53.75:0,54,1519	0/0:21,0:21:60.16:0,60,1479	0/0:32,0:32:93.24:0,93,2469	1/1:3,0:3:9.03:141,9,0	1/1:0,7:7:20.97:209,21,0	1/1:3,0:3:8.88:89,9,0	1/1:2,0:2:5.99:49,6,0
chr10	54262662	.	T	TTTCTC	5017	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=4.354;DP=563;FS=0.563;HRun=0;HaplotypeScore=111.6315;InbreedingCoeff=0.7426;MQ=62.17;MQ0=20;MQRankSum=-6.561;QD=15.11;ReadPosRankSum=-0.899;VQSLOD=4.3381;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,22:31:30.10:842,30,0	1/1:6,1:7:6.01:109,6,0	0/0:47,0:16:0.47:0,0,1	0/0:74,0:20:3.01:0,3,37	1/1:9,0:9:11.98:143,12,0	1/1:8,0:8:9.03:187,9,0	1/1:21,0:21:18.07:152,18,0	1/1:33,0:33:13.36:68,13,0	1/1:14,0:14:9.03:194,9,0	1/1:10,0:10:9:134,9,0	1/1:8,0:8:6.02:101,6,0	0/0:31,0:31:66.19:0,66,1089	0/0:17,0:17:33.10:0,33,518	1/1:19,0:19:12.04:245,12,0	1/1:24,0:24:9.03:194,9,0	1/1:10,13:24:21.07:590,21,0	1/1:9,13:21:21.07:590,21,0	1/1:7,7:14:6.02:168,6,0	1/1:13,0:12:11.97:176,12,0	1/1:4,0:4:3.01:31,3,0	1/1:14,0:14:9:100,9,0	0/0:18,0:17:36.09:0,36,546	0/0:18,0:18:30.08:0,30,478	0/0:26,0:26:66.21:0,66,1125	1/1:15,0:14:6.45:59,6,0	1/1:20,0:20:38.60:577,39,0	1/1:14,0:14:19.36:227,19,0	1/1:8,0:5:6.02:129,6,0
chr10	54262693	.	TTC	T	477.37	PASS	AB=0.978;AC=17;AF=0.304;AN=56;BaseQRankSum=4.993;DP=583;FS=1.421;HRun=0;HaplotypeScore=100.7629;InbreedingCoeff=0.2078;MQ=61.99;MQ0=19;MQRankSum=-5.257;QD=2.97;ReadPosRankSum=-3.783;VQSLOD=1.1634;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:57.15:0,57,707	0/1:8,0:8:9.74:10,0,153	0/0:61,0:14:24.81:0,25,296	0/0:88,0:21:31.68:0,32,388	1/1:13,0:13:1.78:116,2,0	0/1:12,0:12:1.33:1,0,30	0/1:17,3:20:8.43:73,0,8	0/0:26,0:25:9.61:0,10,35	0/0:15,0:15:8.88:0,9,58	0/1:12,0:12:16.82:17,0,22	1/1:7,0:7:6.69:86,7,0	0/0:27,0:27:81.26:0,81,1375	0/0:17,0:17:51.17:0,51,858	0/1:15,0:15:27.19:27,0,46	0/0:22,0:22:8.84:0,9,56	0/0:26,0:26:51.15:0,51,660	0/0:21,1:21:39.11:0,39,500	0/0:16,0:17:26.44:0,26,339	1/1:11,0:10:7.01:66,7,0	1/1:3,0:3:0.04:9,0,0	0/1:10,0:10:4.78:29,0,5	0/0:16,0:16:48.16:0,48,826	0/0:17,0:17:45.14:0,45,725	0/0:29,0:29:81.28:0,81,1387	0/1:12,1:12:5.30:42,0,5	0/1:20,0:20:59.01:96,0,59	0/1:17,0:17:2.91:63,0,3	0/0:5,0:5:5.90:0,6,38
chr10	54262695	.	C	CTCT	3765.19	PASS	AB=0.955;AC=33;AF=0.589;AN=56;BaseQRankSum=7.146;DP=581;FS=0.924;HRun=0;HaplotypeScore=98.0780;InbreedingCoeff=0.3273;MQ=62.29;MQ0=18;MQRankSum=-3.367;QD=11.55;ReadPosRankSum=-0.387;VQSLOD=3.3276;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:32,0:32:99:280,0,371	0/1:7,0:7:41.14:41,0,123	0/0:62,0:14:24.83:0,25,321	0/0:84,0:21:36.91:0,37,413	1/1:12,0:12:26.92:317,27,0	1/1:13,0:13:9.03:153,9,0	1/1:21,0:21:3.04:146,3,0	0/1:26,0:25:17.58:66,0,18	1/1:15,0:15:12.04:194,12,0	1/1:12,0:12:26.92:307,27,0	1/1:8,0:8:7.97:156,8,0	0/0:28,0:28:81.26:0,81,1313	0/0:17,0:17:51.17:0,51,824	1/1:16,0:16:12.04:194,12,0	1/1:22,0:22:9.03:132,9,0	0/1:27,0:27:99:166,0,422	0/1:19,0:18:99:178,0,250	0/1:17,0:17:34.90:35,0,272	1/1:10,1:10:12.21:140,12,0	0/1:2,1:3:0.20:62,0,0	0/1:11,1:12:1.45:93,0,1	0/0:17,0:17:48.16:0,48,784	0/0:17,0:17:45.14:0,45,705	0/0:29,0:29:81.28:0,81,1327	0/1:11,1:11:4.64:70,0,5	1/1:19,0:20:59.78:664,60,0	1/1:12,4:16:5.06:283,5,0	1/1:5,0:5:6.02:89,6,0
chr10	54262696	.	TC	T	3457.50	PASS	AB=0.620;AC=27;AF=0.482;AN=56;BaseQRankSum=3.810;DP=572;FS=1.463;HRun=1;HaplotypeScore=85.7509;InbreedingCoeff=0.4971;MQ=63.54;MQ0=15;MQRankSum=2.207;QD=16.87;ReadPosRankSum=-0.344;VQSLOD=3.6859;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:60.12:0,60,742	0/0:7,0:7:14.88:0,15,186	0/0:62,0:14:23.02:0,23,342	0/0:83,1:22:27.17:0,27,466	1/1:12,0:12:0.98:191,1,0	0/0:13,0:13:1.65:0,2,5	1/1:4,17:21:2.02:523,2,0	1/1:3,22:24:21.86:790,22,0	1/1:15,0:15:1.41:2,1,0	1/1:11,0:11:3.02:230,3,0	1/1:8,0:8:5.12:97,5,0	0/0:28,0:28:84.29:0,84,1333	0/0:17,0:17:51.17:0,51,815	1/1:16,0:16:1.41:2,1,0	1/1:22,0:22:0.94:2,1,0	0/0:27,0:27:60.16:0,60,793	0/0:19,0:18:39.10:0,39,488	0/0:16,0:16:27.04:0,27,365	0/1:4,4:7:18.03:109,0,18	0/1:1,2:3:6.47:75,0,6	1/1:3,9:12:1.31:268,1,0	0/0:17,0:17:51.17:0,51,806	0/0:16,0:16:48.16:0,48,756	0/0:29,0:29:84.26:0,84,1317	1/1:3,8:11:8.94:278,9,0	1/1:20,0:20:0.19:457,0,0	0/1:5,11:16:9.45:416,0,9	1/1:5,0:5:2.92:18,3,0
chr10	54262697	.	C	CTTCTCTTCT	10218.39	PASS	AB=1.000;AC=37;AF=0.661;AN=56;BaseQRankSum=3.056;DP=581;FS=2.886;HRun=0;HaplotypeScore=120.5013;InbreedingCoeff=0.5504;MQ=64.56;MQ0=14;MQRankSum=-2.342;QD=30.96;ReadPosRankSum=-1.484;VQSLOD=4.5398;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:32,0:32:99:203,0,387	0/1:7,0:7:34.44:34,0,127	0/0:62,0:14:19.97:0,20,327	0/0:83,0:23:24.47:0,24,411	1/1:0,12:14:33.11:722,33,0	1/1:0,11:13:9.03:438,9,0	1/1:21,0:21:54.17:895,54,0	1/1:24,0:24:67.75:936,68,0	1/1:1,12:16:9.03:445,9,0	1/1:1,8:13:33.11:674,33,0	1/1:0,10:10:21.07:439,21,0	0/0:28,0:28:84.27:0,84,2224	0/0:17,0:17:51.17:0,51,1190	1/1:1,12:18:12.04:562,12,0	1/1:0,16:22:9.03:445,9,0	0/1:27,0:27:99:116,0,461	0/1:19,0:18:99:131,0,247	0/1:16,0:16:21.50:22,0,319	1/1:9,0:8:16.30:249,16,0	1/1:3,0:3:9.03:137,9,0	1/1:12,0:12:27.08:460,27,0	0/0:17,0:17:51.17:0,51,1187	0/0:16,0:16:45.14:0,45,993	0/0:28,0:28:81.75:0,82,2095	1/1:10,0:11:27.09:486,27,0	1/1:1,17:21:63.21:1667,63,0	1/1:16,0:16:48.16:860,48,0	1/1:1,4:5:6.02:297,6,0
chr10	54262907	.	G	GCC	8835.77	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=-12.856;DP=522;FS=1.567;HRun=7;HaplotypeScore=60.4291;InbreedingCoeff=0.9893;MQ=78.55;MQ0=0;MQRankSum=-3.250;QD=36.06;ReadPosRankSum=-3.215;VQSLOD=4.0644;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,102,1188	0/0:10,0:10:27.08:0,27,314	0/0:16,0:16:41.83:0,42,426	0/0:12,0:12:27.05:0,27,298	1/1:1,8:9:24:335,24,0	1/1:3,12:15:36.12:591,36,0	1/1:3,18:21:45.15:739,45,0	1/1:3,12:15:32.98:452,33,0	1/1:2,21:24:63.21:1020,63,0	1/1:3,6:9:15.05:246,15,0	1/1:0,8:8:21.03:315,21,0	0/0:39,0:39:99:0,99,1143	0/0:24,0:24:69.18:0,69,791	1/1:3,16:20:48.16:788,48,0	1/1:3,17:20:45.15:739,45,0	0/0:25,0:25:72.21:0,72,839	0/0:36,0:35:99:0,99,1153	0/0:15,0:15:39.11:0,39,455	1/1:5,11:16:33.08:503,33,0	1/1:1,8:9:15.05:246,15,0	1/1:4,30:37:86.10:1311,86,0	0/0:16,0:16:42.09:0,42,476	0/0:10,0:10:24.04:0,24,269	0/0:35,0:35:87.21:0,87,992	1/1:1,11:13:27.09:423,27,0	1/1:1,8:9:24.08:384,24,0	1/1:3,12:15:35.61:550,36,0	1/1:0,4:4:12.04:197,12,0
chr10	54264222	.	C	CA	18811.82	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=2.130;DP=605;FS=6.225;HRun=2;HaplotypeScore=86.5809;InbreedingCoeff=0.9990;MQ=72.72;MQ0=0;MQRankSum=-2.958;QD=39.27;ReadPosRankSum=1.664;VQSLOD=5.1235;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,43:44:99:1597,111,0	1/1:0,8:8:24.08:345,24,0	0/0:14,0:14:32.93:0,33,368	0/0:19,0:15:28.26:0,28,355	1/1:1,20:21:57.15:797,57,0	1/1:1,18:19:54.18:778,54,0	1/1:2,28:30:81.27:1167,81,0	1/1:5,27:32:81.22:1095,81,0	1/1:2,16:18:51.16:719,51,0	1/1:2,16:18:48.12:666,48,0	1/1:1,13:14:42.14:598,42,0	0/0:25,0:25:66.21:0,66,818	0/0:24,0:24:72.21:0,72,880	1/1:0,20:20:54.18:777,54,0	1/1:0,18:18:51.17:735,51,0	1/1:0,30:30:90.30:1296,90,0	1/1:1,30:30:87.29:1252,87,0	1/1:0,18:18:48.16:691,48,0	1/1:2,19:21:60.19:836,60,0	1/1:2,15:17:45.11:625,45,0	1/1:0,30:30:84.28:1209,84,0	0/0:8,0:8:24.08:0,24,298	0/0:13,0:13:36.11:0,36,446	0/0:23,0:23:63.18:0,63,768	1/1:0,22:22:60.20:864,60,0	1/1:1,20:21:57.19:821,57,0	1/1:0,29:30:84.18:1209,84,0	1/1:0,17:17:51.17:734,51,0
chr10	54264905	.	AGCGC	A	15179.34	PASS	AB=0.952;AC=43;AF=0.768;AN=56;BaseQRankSum=7.089;DP=717;FS=2.766;HRun=0;HaplotypeScore=242.8131;InbreedingCoeff=0.8462;MQ=78.37;MQ0=7;MQRankSum=-8.864;QD=30.24;ReadPosRankSum=2.018;VQSLOD=4.9207;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:9,21:28:39.13:674,39,0	1/1:1,3:4:3.01:56,3,0	0/1:56,0:35:10.40:10,0,302	0/0:93,0:45:33.01:0,33,316	1/1:5,23:28:33.10:594,33,0	1/1:4,12:16:27.09:480,27,0	1/1:6,17:23:30.10:541,30,0	1/1:16,11:27:69.23:1215,69,0	1/1:6,21:27:51.17:923,51,0	1/1:1,19:20:51.65:912,52,0	1/1:4,12:16:21.07:353,21,0	0/0:26,0:26:72.23:0,72,1697	0/0:21,0:21:56.85:0,57,1281	1/1:8,16:24:48.15:843,48,0	1/1:6,23:29:68.45:1212,68,0	1/1:4,13:17:42.13:745,42,0	1/1:8,8:16:36.08:572,36,0	1/1:1,16:16:33.11:615,33,0	1/1:11,12:23:54.18:953,54,0	1/1:2,24:26:51.17:805,51,0	1/1:9,11:20:34.05:445,34,0	0/0:23,0:23:66.23:0,66,1671	0/0:18,0:18:50.65:0,51,1151	0/0:30,0:30:75.24:0,75,1927	1/1:5,15:20:33.10:551,33,0	1/1:8,21:29:84.28:1473,84,0	1/1:2,22:24:69.18:1153,69,0	1/1:0,6:6:3.01:56,3,0
chr10	54264936	.	GCTCTCTCTCTCTCT	G	16817.12	PASS	AC=38;AF=0.731;AN=52;BaseQRankSum=11.975;DP=902;FS=14.316;HRun=0;HaplotypeScore=333.3812;InbreedingCoeff=0.9524;MQ=61.67;MQ0=37;MQRankSum=-9.700;QD=38.66;ReadPosRankSum=4.587;VQSLOD=2.8890;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:13,23:34:9.03:357,9,0	./.	0/0:118,0:32:66.96:0,67,1583	0/0:203,0:64:18.39:0,18,1327	1/1:8,23:31:18.53:732,19,0	1/1:5,11:16:15.05:609,15,0	1/1:11,17:28:18.06:601,18,0	1/1:16,19:34:57.13:1360,57,0	1/1:8,23:31:27.09:1097,27,0	1/1:6,6:12:24.08:922,24,0	1/1:4,11:15:6.02:244,6,0	0/0:34,0:34:90.30:0,90,5019	0/0:19,0:21:57.19:0,57,3303	1/1:10,19:29:15.05:609,15,0	1/1:13,13:27:39.12:1463,39,0	1/1:5,12:17:21.07:853,21,0	1/1:4,13:17:21.07:809,21,0	1/1:12,4:15:19.90:564,20,0	1/1:7,5:12:15.05:610,15,0	1/1:7,16:23:51.17:1532,51,0	1/1:12,6:18:24.08:609,24,0	0/0:29,0:32:84.29:0,84,4688	0/0:15,0:15:35.17:0,35,2262	0/0:37,0:38:99:0,102,6290	1/1:4,19:23:18.06:731,18,0	1/1:10,16:26:47.80:1484,48,0	1/1:6,17:23:42.14:1632,42,0	./.
chr10	54265037	.	TAG	T	3048.16	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=7.515;DP=642;FS=9.794;HRun=0;HaplotypeScore=101.1322;InbreedingCoeff=0.9891;MQ=77.94;MQ0=0;MQRankSum=-0.900;QD=34.25;ReadPosRankSum=-0.479;VQSLOD=5.3294;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:72.25:0,72,1325	0/0:5,0:5:12.04:0,12,225	0/0:27,0:28:75.21:0,75,1255	0/0:24,0:24:51.09:0,51,894	0/0:23,0:23:66.23:0,66,1235	0/0:16,0:16:45.15:0,45,842	0/0:23,0:23:69.22:0,69,1259	0/0:27,0:27:72.22:0,72,1254	0/0:27,0:27:57.20:0,57,1067	0/0:26,0:26:63.21:0,63,1147	0/0:18,0:18:45.15:0,45,842	0/0:24,0:24:69.24:0,69,1282	0/0:26,0:26:78.25:0,78,1426	0/0:27,0:27:66.23:0,66,1226	0/0:32,0:32:93.32:0,93,1728	0/0:24,0:24:69.24:0,69,1292	0/0:28,0:28:75.25:0,75,1379	0/0:30,0:30:84.29:0,84,1560	1/1:1,24:25:72.16:960,72,0	1/1:1,11:12:30.10:441,30,0	1/1:0,33:33:66.22:971,66,0	0/0:16,0:16:48.16:0,48,899	0/0:18,0:18:48.16:0,48,899	0/0:28,0:28:81.28:0,81,1497	0/0:32,0:32:75.26:0,75,1404	0/0:19,0:19:57.20:0,57,1067	1/1:1,18:19:57.19:837,57,0	0/0:6,0:6:18.02:0,18,290
chr10	54265332	.	ACAG	A	22118.25	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=12.719;DP=683;FS=11.951;HRun=0;HaplotypeScore=105.0517;InbreedingCoeff=0.9684;MQ=80.95;MQ0=0;MQRankSum=-7.607;QD=42.95;ReadPosRankSum=2.303;VQSLOD=6.2525;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,46:46:99:1841,108,0	1/1:0,9:9:24.08:409,24,0	0/0:17,0:17:48.16:0,48,1062	0/0:24,0:24:69.24:0,69,1535	1/1:2,32:34:90.31:1533,90,0	1/1:2,24:26:60.21:1022,60,0	1/1:2,29:31:69.24:1154,69,0	1/1:0,23:23:69.24:1173,69,0	1/1:0,24:24:69.24:1176,69,0	1/1:0,20:20:60.19:998,60,0	1/1:2,25:27:66.23:1125,66,0	0/0:25,0:25:72.25:0,72,1635	0/0:23,0:23:69.22:0,69,1522	1/1:0,29:29:75.26:1278,75,0	1/1:0,27:27:75.26:1278,75,0	1/1:0,24:24:69.24:1176,69,0	1/1:1,29:30:69.24:1166,69,0	1/1:1,16:17:45.15:767,45,0	1/1:1,15:16:45.15:767,45,0	1/1:4,22:26:69.15:1124,69,0	1/1:2,27:29:57.20:972,57,0	0/0:20,0:20:60.21:0,60,1383	0/0:25,0:25:75.26:0,75,1701	0/0:34,0:33:93.30:0,93,2076	1/1:3,26:29:66.23:1125,66,0	1/1:0,23:23:69.24:1164,69,0	1/1:2,22:24:48.16:818,48,0	1/1:0,1:1:3.01:51,3,0
chr10	54266783	.	A	ACAGCAG	25894.77	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=-10.330;DP=613;FS=8.504;HRun=0;HaplotypeScore=107.4924;InbreedingCoeff=0.9762;MQ=84.80;MQ0=3;MQRankSum=-14.051;QD=56.79;ReadPosRankSum=-0.691;VQSLOD=4.3231;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,23:38:45.15:1296,45,0	1/1:0,9:10:18.06:618,18,0	0/0:31,0:31:66.17:0,66,1351	0/0:23,0:23:50.48:0,50,892	1/1:1,26:27:66.23:2058,66,0	1/1:2,10:14:24.08:790,24,0	1/1:5,19:26:45.15:1421,45,0	1/1:7,15:37:84.12:1992,84,0	1/1:2,19:22:45.15:1486,45,0	1/1:2,22:32:80.90:1980,81,0	1/1:3,11:20:21.07:686,21,0	0/0:25,0:25:72.23:0,72,1574	0/0:26,0:26:72.22:0,72,1530	1/1:0,11:15:21.02:719,21,0	1/1:2,20:25:54.19:1795,54,0	1/1:3,21:25:51.18:1722,51,0	1/1:2,15:18:36.12:1176,36,0	1/1:6,0:5:6.02:206,6,0	1/1:5,9:20:48.13:1475,48,0	1/1:3,13:21:33.11:942,33,0	1/1:11,8:21:18.06:473,18,0	0/0:18,0:18:48.14:0,48,1017	0/0:16,0:16:36.11:0,36,766	0/0:18,0:18:51.16:0,51,1086	1/1:3,21:23:39.13:1211,39,0	1/1:1,12:21:51.09:1377,51,0	1/1:1,19:23:42.14:1442,42,0	1/1:0,10:10:30.10:1030,30,0
chr10	54269162	.	TTTTTG	T	2211.83	PASS	AB=0.986;AC=24;AF=0.429;AN=56;BaseQRankSum=-1.319;DP=422;FS=54.773;HRun=0;HaplotypeScore=98.2575;InbreedingCoeff=0.0008;MQ=59.90;MQ0=6;MQRankSum=-1.251;QD=7.30;ReadPosRankSum=1.881;VQSLOD=-0.2285;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:28,2:30:18.03:194,18,0	0/1:3,1:4:2.74:78,0,3	0/1:17,0:7:14.20:14,0,82	0/1:17,0:7:6.89:7,0,30	0/1:19,0:18:37.40:37,0,98	0/0:21,0:21:31.10:0,31,230	0/1:11,0:11:59.24:59,0,65	0/1:20,0:19:1.72:188,0,2	0/1:10,0:10:13.13:13,0,80	0/1:23,0:23:99:167,0,124	0/1:18,0:18:49.22:49,0,189	0/0:14,0:13:29.40:0,29,609	0/0:16,0:16:36.27:0,36,560	0/0:8,0:8:2.85:0,3,103	0/0:15,0:15:23.16:0,23,195	0/1:5,0:5:15.70:83,0,16	0/1:16,0:16:1.26:92,0,1	1/1:18,0:18:1.05:16,1,0	1/1:16,1:16:21.26:509,21,0	1/1:12,3:14:30.03:418,30,0	1/1:3,0:3:5.97:47,6,0	0/0:9,0:9:20.04:0,20,271	0/0:19,0:19:49.33:0,49,872	0/0:16,0:16:27.30:0,27,432	0/1:21,0:21:49.27:49,0,167	0/1:27,0:27:85.16:85,0,258	0/1:12,0:12:12.61:276,0,13	0/0:1,0:1:2.60:0,3,10
chr10	54269163	.	TTTTG	T	3432.15	PASS	AB=0.993;AC=33;AF=0.589;AN=56;BaseQRankSum=0.837;DP=437;FS=30.021;HRun=0;HaplotypeScore=90.7168;InbreedingCoeff=0.0323;MQ=59.05;MQ0=8;MQRankSum=-1.935;QD=10.01;ReadPosRankSum=-0.562;VQSLOD=1.0309;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:29,2:31:32.14:355,32,0	1/1:5,0:5:7.26:76,7,0	0/1:17,0:7:14.20:14,0,62	0/0:17,0:7:4.73:0,5,49	0/1:21,0:20:35.92:98,0,36	0/1:21,0:21:53.36:58,0,53	0/1:11,0:11:34.39:70,0,34	1/1:20,0:19:43.40:348,43,0	0/1:10,0:10:24.86:51,0,25	0/1:23,1:24:14.45:277,0,14	0/1:18,0:18:78.62:113,0,79	0/0:15,0:14:27.57:0,28,504	0/0:16,0:16:35.22:0,35,424	0/1:8,0:8:21.42:21,0,50	0/1:16,0:16:45.41:45,0,60	1/1:4,2:6:1.64:115,2,0	1/1:18,1:19:24.82:171,25,0	1/1:18,0:18:10.55:73,11,0	1/1:11,5:15:22.95:506,23,0	1/1:15,0:14:30.03:378,30,0	1/1:3,0:3:5.97:47,6,0	0/0:10,0:10:0.37:0,0,191	0/0:19,0:19:45.18:0,45,688	0/0:17,0:16:26.77:0,27,353	0/1:21,0:21:39.23:96,0,39	0/1:28,1:28:99:220,0,101	1/1:11,1:12:0.09:276,0,0	1/1:2,0:2:4.78:25,5,0
chr10	54269164	.	TTTG	T	4628.48	PASS	AB=0.983;AC=41;AF=0.732;AN=56;BaseQRankSum=0.940;DP=433;FS=11.299;HRun=0;HaplotypeScore=79.6236;InbreedingCoeff=0.4608;MQ=55.00;MQ0=8;MQRankSum=-3.364;QD=13.19;ReadPosRankSum=-1.368;VQSLOD=3.1298;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,24:31:33.90:420,34,0	1/1:5,0:5:8.98:86,9,0	0/1:16,0:6:14.17:14,0,39	0/0:15,0:5:7.60:0,8,53	1/1:18,2:19:0.95:130,1,0	1/1:21,0:21:18.52:230,19,0	1/1:8,1:9:3.38:111,3,0	1/1:17,2:18:51.01:458,51,0	1/1:10,0:10:13.35:129,13,0	1/1:24,0:24:36.04:406,36,0	0/1:17,1:18:5.61:202,0,6	0/0:15,0:14:26.93:0,27,395	0/0:16,0:16:28.17:0,28,284	0/1:8,0:8:13.19:45,0,13	1/1:14,0:14:8.06:142,8,0	1/1:9,0:9:22.06:178,22,0	1/1:17,2:19:28.81:206,29,0	1/1:3,15:18:11.66:130,12,0	1/1:18,0:17:37.35:483,37,0	1/1:14,0:13:35.91:365,36,0	1/1:3,0:3:5.97:47,6,0	0/1:11,0:11:18:18,0,158	0/0:19,0:19:27.80:0,28,513	0/0:17,0:16:24.27:0,24,271	1/1:21,0:21:12.18:210,12,0	0/1:28,1:28:3.34:295,0,3	1/1:12,0:12:16.49:281,16,0	1/1:2,0:2:5.95:42,6,0
chr10	54269165	.	TTG	T	5659.47	PASS	AB=1.000;AC=45;AF=0.804;AN=56;BaseQRankSum=1.526;DP=429;FS=1.141;HRun=0;HaplotypeScore=69.6074;InbreedingCoeff=0.5671;MQ=53.57;MQ0=8;MQRankSum=-3.783;QD=15.55;ReadPosRankSum=-3.441;VQSLOD=4.1019;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:30,1:31:33.91:354,34,0	1/1:5,0:5:8.98:80,9,0	0/1:15,0:5:14.42:14,0,18	0/0:15,0:5:7.77:0,8,45	1/1:19,1:19:25.02:219,25,0	1/1:19,2:21:49.54:444,50,0	1/1:9,0:9:21.78:171,22,0	1/1:17,2:18:52.36:454,52,0	1/1:10,0:10:27.97:237,28,0	1/1:21,3:24:61.73:503,62,0	1/1:16,2:18:40.28:318,40,0	0/0:15,0:14:18.22:0,18,299	0/1:16,0:16:16.35:16,0,140	1/1:7,1:8:8.41:77,8,0	1/1:13,1:14:38.14:291,38,0	1/1:9,0:9:23.80:183,24,0	1/1:19,1:19:29.34:222,29,0	1/1:18,0:18:11.80:142,12,0	1/1:18,0:17:46.53:427,47,0	1/1:13,0:12:35.88:327,36,0	1/1:3,0:3:5.97:47,6,0	0/1:11,0:11:19.86:20,0,123	0/0:18,0:18:12.71:0,13,356	0/0:17,0:16:9.67:0,10,181	1/1:16,5:21:40.53:351,41,0	1/1:26,2:27:53.53:454,54,0	1/1:11,0:11:27.47:265,27,0	1/1:2,0:2:5.95:42,6,0
chr10	54269166	.	TG	T	6135.37	PASS	AB=0.976;AC=47;AF=0.839;AN=56;BaseQRankSum=1.835;DP=428;FS=2.945;HRun=1;HaplotypeScore=61.9586;InbreedingCoeff=0.2992;MQ=52.08;MQ0=10;MQRankSum=-5.082;QD=15.42;ReadPosRankSum=-2.868;VQSLOD=3.6957;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:31,1:31:34.20:289,34,0	1/1:5,0:5:8.97:73,9,0	0/1:13,1:4:2.32:21,0,2	0/0:15,0:5:5.02:0,5,26	1/1:14,6:19:32.19:275,32,0	1/1:17,4:21:56.32:513,56,0	1/1:7,2:9:23.91:207,24,0	1/1:19,1:19:55.55:463,56,0	1/1:9,1:10:29.88:246,30,0	1/1:23,1:24:65.94:547,66,0	1/1:11,7:18:50.15:401,50,0	0/0:15,0:14:16.25:0,16,223	0/1:16,0:16:60.26:60,0,63	1/1:7,1:8:16.35:100,16,0	1/1:11,3:14:41.75:351,42,0	1/1:8,1:9:23.78:171,24,0	1/1:20,0:19:29.64:227,30,0	1/1:17,1:18:11.86:107,12,0	1/1:17,0:16:47.83:381,48,0	1/1:12,1:12:35.87:302,36,0	1/1:3,0:3:5.97:47,6,0	0/1:11,0:11:32.17:32,0,97	0/1:17,1:18:25.73:26,0,235	0/1:17,0:16:7.75:8,0,109	1/1:14,7:20:47.80:464,48,0	1/1:23,4:26:70.44:526,70,0	1/1:9,2:11:32.12:257,32,0	1/1:2,0:2:5.95:42,6,0
chr10	54269188	.	CT	C	1633.06	PASS	AB=0.830;AC=32;AF=0.571;AN=56;BaseQRankSum=0.686;DP=408;FS=26.008;HRun=12;HaplotypeScore=77.9858;InbreedingCoeff=0.6752;MQ=51.78;MQ0=10;MQRankSum=-5.607;QD=6.67;ReadPosRankSum=3.102;VQSLOD=0.5030;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:15.65:0,16,103	0/0:5,0:5:5.96:0,6,50	0/0:4,3:5:4.41:0,4,14	0/0:15,1:8:7.67:0,8,25	1/1:10,8:18:19.89:145,20,0	1/1:12,10:20:20.68:162,21,0	1/1:4,6:10:17.92:139,18,0	1/1:15,5:19:14.78:134,15,0	1/1:7,3:10:8.89:69,9,0	1/1:6,11:17:35.68:272,36,0	1/1:10,4:15:7.90:52,8,0	0/0:16,0:16:26.75:0,27,220	0/0:12,0:12:23.81:0,24,210	0/1:5,2:7:19.52:41,0,20	1/1:7,8:14:20.88:162,21,0	0/0:15,0:15:0.81:0,1,190	0/0:21,0:19:21.97:0,22,207	0/0:17,0:17:11.89:0,12,106	1/1:14,8:21:23.74:185,24,0	1/1:9,4:15:10.85:75,11,0	1/1:2,2:4:2.99:23,3,0	0/0:13,1:14:0.82:0,1,183	0/1:12,1:14:2.40:2,0,125	0/0:13,1:12:17.92:0,18,155	1/1:15,1:15:2.79:20,3,0	1/1:7,5:11:14.92:116,15,0	1/1:9,12:19:16.69:138,17,0	1/1:1,4:5:11.95:93,12,0
chr10	54269779	.	A	AG	8707.92	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=17.638;DP=737;FS=0.000;HRun=4;HaplotypeScore=147.6478;InbreedingCoeff=0.9941;MQ=93.25;MQ0=0;MQRankSum=-6.314;QD=16.16;ReadPosRankSum=6.030;VQSLOD=3.6849;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:46,0:46:99:734,110,0	1/1:12,0:12:32.56:213,33,0	0/0:39,0:39:78.23:0,78,951	0/0:25,0:26:53.30:0,53,669	1/1:21,1:22:50.40:349,50,0	1/1:20,1:21:53.30:348,53,0	1/1:28,0:28:64.98:419,65,0	1/1:28,0:28:64.43:391,64,0	1/1:27,1:28:71.14:489,71,0	1/1:23,0:23:61.60:385,62,0	1/1:17,1:18:44.10:277,44,0	0/0:26,0:26:75.21:0,75,847	0/0:27,0:27:69.16:0,69,755	1/1:27,0:27:73.92:486,74,0	1/1:37,1:38:94.65:631,95,0	1/1:37,0:37:97.37:624,97,0	1/1:29,0:29:68.13:452,68,0	1/1:22,0:22:62.09:406,62,0	1/1:26,0:26:58.89:387,59,0	1/1:24,0:24:71.10:470,71,0	1/1:32,0:32:65.12:428,65,0	0/0:21,0:21:60.17:0,60,673	0/0:25,0:25:57.14:0,57,628	0/0:34,0:34:93.09:0,93,1033	1/1:26,0:26:56.05:356,56,0	1/1:22,0:22:50.37:302,50,0	1/1:26,0:26:71.14:483,71,0	1/1:4,0:4:11.85:78,12,0
chr10	54269783	.	G	GT	20114.51	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=15.201;DP=716;FS=1.810;HRun=0;HaplotypeScore=106.4808;InbreedingCoeff=0.9944;MQ=91.40;MQ0=0;MQRankSum=-5.984;QD=38.17;ReadPosRankSum=7.027;VQSLOD=4.2098;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,43:45:99:1642,111,0	1/1:0,13:13:33.11:474,33,0	0/0:34,0:34:89.47:0,89,1251	0/0:25,0:25:53.64:0,54,861	1/1:4,18:22:53.90:756,54,0	1/1:1,19:20:54.17:778,54,0	1/1:1,29:30:66.22:972,66,0	1/1:0,26:26:78.21:1064,78,0	1/1:1,26:27:72.24:1042,72,0	1/1:0,21:22:66.17:927,66,0	1/1:2,15:17:42.12:615,42,0	0/0:26,0:26:75.25:0,75,1031	0/0:24,0:24:69.19:0,69,905	1/1:0,27:27:75.25:1129,75,0	1/1:1,37:38:96.30:1391,96,0	1/1:0,35:35:99:1462,99,0	1/1:0,28:28:69.23:1028,69,0	1/1:0,22:22:63.21:937,63,0	1/1:0,26:26:75.20:1020,75,0	1/1:2,25:27:72.24:1046,72,0	1/1:1,29:30:66.22:963,66,0	0/0:23,0:23:66.20:0,66,860	0/0:25,0:25:66.17:0,66,825	0/0:32,0:32:93.17:0,93,1293	1/1:1,21:22:57.17:821,57,0	1/1:0,20:20:57.17:790,57,0	1/1:1,25:26:72.24:1079,72,0	1/1:0,4:4:12.04:179,12,0
chr10	54270435	.	AAT	A	18485.36	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=11.662;DP=691;FS=3.501;HRun=0;HaplotypeScore=85.2280;InbreedingCoeff=0.9955;MQ=78.30;MQ0=2;MQRankSum=-2.550;QD=40.63;ReadPosRankSum=3.019;VQSLOD=6.5365;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,36:37:93.32:1424,93,0	1/1:0,15:15:39.13:597,39,0	0/0:18,0:18:51.17:0,51,928	0/0:17,0:17:45.14:0,45,756	1/1:2,24:26:63.21:965,63,0	1/1:0,32:32:96.33:1470,96,0	1/1:1,29:30:66.22:1010,66,0	1/1:1,36:37:99:1650,111,0	1/1:1,24:24:69.23:1057,69,0	1/1:2,30:32:93.30:1400,93,0	1/1:1,23:24:63.17:939,63,0	0/0:23,0:23:66.21:0,66,1233	0/0:26,0:26:75.26:0,75,1448	1/1:1,28:29:78.26:1195,78,0	1/1:0,25:25:63.21:965,63,0	1/1:0,34:34:96.33:1470,96,0	1/1:1,24:25:63.21:965,63,0	1/1:1,18:19:48.16:735,48,0	0/0:19,0:19:57.19:0,57,1066	0/0:21,0:21:60.21:0,60,1159	0/0:11,0:11:30.10:0,30,580	0/0:19,0:19:57.20:0,57,1073	0/0:24,0:24:69.22:0,69,1300	0/0:33,0:33:96.33:0,96,1854	1/1:1,20:20:57.19:873,57,0	1/1:2,35:37:99:1586,105,0	0/0:25,0:25:75.26:0,75,1436	1/1:0,7:7:12.04:184,12,0
chr10	54270592	.	T	TTG	2474.74	PASS	AB=0.613;AC=6;AF=0.107;AN=56;BaseQRankSum=-5.986;DP=689;FS=1.055;HRun=0;HaplotypeScore=81.8343;InbreedingCoeff=0.5036;MQ=59.81;MQ0=15;MQRankSum=-0.516;QD=23.80;ReadPosRankSum=-0.175;VQSLOD=4.1712;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:33:59.85:0,60,678	0/0:6,0:6:15.05:0,15,181	0/0:32,0:13:11.88:0,12,109	0/0:28,0:10:11.18:0,11,89	0/0:24,0:24:61.43:0,61,726	0/0:36,0:36:92.95:0,93,1111	0/0:21,0:21:32.56:0,33,360	0/0:27,0:27:42.13:0,42,506	0/0:21,0:21:47.82:0,48,578	0/0:22,0:22:45.11:0,45,535	0/0:23,0:24:44.91:0,45,484	0/0:14,0:14:33.10:0,33,396	0/0:18,0:21:56.65:0,57,605	0/0:20,0:19:36.11:0,36,434	0/0:17,0:17:30.04:0,30,345	0/0:20,0:20:51.16:0,51,615	0/0:29,0:35:17.07:0,17,520	0/0:33,0:34:47.84:0,48,736	0/1:7,7:13:12.14:255,0,12	1/1:11,24:35:69.23:1077,69,0	0/1:7,25:33:45.13:803,0,45	0/0:31,0:30:80.91:0,81,940	0/0:25,0:26:56.99:0,57,653	0/0:22,0:22:45.14:0,45,542	0/0:30,0:30:69.21:0,69,832	0/0:32,0:32:69.20:0,69,820	1/1:9,13:22:0.89:464,1,0	0/0:7,0:8:23.91:0,24,267
chr10	54274906	.	G	GA	14630.20	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=-14.908;DP=700;FS=0.726;HRun=8;HaplotypeScore=56.2302;InbreedingCoeff=0.9947;MQ=81.00;MQ0=0;MQRankSum=-3.409;QD=27.30;ReadPosRankSum=1.375;VQSLOD=5.4437;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,23:25:66.13:745,66,0	1/1:5,5:10:15.04:173,15,0	0/0:22,0:22:34.15:0,34,399	0/0:16,0:15:29.61:0,30,256	1/1:5,26:31:75.15:837,75,0	1/1:1,24:25:66.20:762,66,0	1/1:5,17:22:20.68:492,21,0	1/1:13,26:39:78.19:870,78,0	1/1:4,26:30:72.21:831,72,0	1/1:5,21:26:60.14:663,60,0	1/1:7,19:26:57.13:643,57,0	0/0:29,0:29:78.02:0,78,709	0/0:19,0:19:51.02:0,51,467	1/1:4,22:26:57.17:658,57,0	1/1:2,21:23:60.18:692,60,0	1/1:0,22:22:57.17:658,57,0	1/1:2,20:22:60.18:692,60,0	1/1:5,16:21:45.13:519,45,0	1/1:3,15:18:45.13:519,45,0	1/1:2,35:37:99:1183,105,0	1/1:2,23:25:69.21:796,69,0	0/0:26,0:26:72.02:0,72,654	0/0:26,0:26:66.01:0,66,598	0/0:26,0:26:72.03:0,72,658	1/1:8,32:40:84.25:969,84,0	1/1:2,25:27:75.22:866,75,0	1/1:3,28:32:53.61:852,54,0	1/1:0,9:9:18.05:208,18,0
chr10	54277540	.	TCTCCCTCTCCCTCTCCCA	T	2885.48	PASS	AB=0.978;AC=28;AF=0.500;AN=56;BaseQRankSum=-4.135;DP=520;FS=4.496;HRun=0;HaplotypeScore=240.0825;InbreedingCoeff=-0.2378;MQ=67.12;MQ0=13;MQRankSum=6.907;QD=6.47;ReadPosRankSum=2.884;VQSLOD=2.4110;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:26:99:251,0,110	1/1:5,0:5:4.81:29,5,0	0/1:23,0:13:9.99:10,0,73	0/1:15,0:10:0:0,0,0	1/1:13,0:13:2.99:24,3,0	1/1:15,0:14:10.67:156,11,0	0/1:16,0:16:79.70:128,0,80	0/1:19,23:40:99:461,0,132	0/1:20,0:19:1.10:18,0,1	0/1:20,0:20:99:198,0,256	1/1:13,0:13:5.95:53,6,0	0/0:14,0:14:23.91:0,24,484	0/0:12,0:11:15.03:0,15,223	0/1:21,0:21:99:153,0,337	0/1:21,0:21:99:190,0,109	0/1:24,0:24:99:229,0,191	0/1:16,0:16:0.09:168,0,0	0/1:16,0:16:38.72:95,0,39	0/1:25,0:21:99:161,0,149	1/1:7,8:15:17.30:150,17,0	0/1:34,0:31:5.60:131,0,6	0/0:18,0:18:8.95:0,9,143	0/0:12,0:12:3:0,3,25	0/0:18,0:17:18.53:0,19,327	0/1:14,0:14:7.47:79,0,7	0/1:24,0:23:99:157,0,99	0/1:17,0:17:99:124,0,135	0/1:8,0:7:78.86:79,0,168
chr10	54277552	.	TCTCCCA	T	2683.14	PASS	AB=0.970;AC=32;AF=0.571;AN=56;BaseQRankSum=0.043;DP=499;FS=15.345;HRun=0;HaplotypeScore=119.9682;InbreedingCoeff=0.0848;MQ=48.87;MQ0=30;MQRankSum=4.165;QD=6.37;ReadPosRankSum=1.954;VQSLOD=1.6370;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:32,0:28:27.23:199,0,27	0/1:5,0:5:7.16:29,0,7	0/1:27,0:8:1.21:1,0,100	0/0:12,0:4:2.95:0,3,22	1/1:7,0:8:2.99:24,3,0	1/1:14,0:13:1.60:74,2,0	0/1:19,0:18:7.06:91,0,7	0/1:44,0:41:77.96:313,0,78	1/1:17,0:15:8.80:56,9,0	0/1:10,13:22:22.59:197,0,23	1/1:1,8:9:5.88:36,6,0	0/0:15,0:14:22.42:0,22,227	0/0:12,0:11:14.97:0,15,130	0/1:19,0:19:4.67:146,0,5	1/1:22,0:21:25.27:252,25,0	1/1:19,0:19:13.23:287,13,0	0/1:17,0:17:3.69:134,0,4	0/1:17,0:17:10.89:106,0,11	0/1:28,0:21:10.31:186,0,10	1/1:12,0:12:20.66:131,21,0	1/1:28,0:24:2.71:103,3,0	0/0:14,0:14:9.42:0,9,93	0/0:11,0:11:2.31:0,2,24	0/0:14,0:13:17.08:0,17,140	1/1:13,0:12:13.63:151,14,0	0/1:24,0:22:36.07:130,0,36	1/1:16,0:15:22.80:140,23,0	0/1:8,0:7:1.80:67,0,2
chr10	54277590	.	TC	T	155.90	PASS	AB=0.875;AC=13;AF=0.295;AN=44;BaseQRankSum=-0.141;DP=100;FS=0.000;HRun=2;HaplotypeScore=32.8291;InbreedingCoeff=0.3044;MQ=46.31;MQ0=7;MQRankSum=-0.361;QD=4.33;ReadPosRankSum=1.869;VQSLOD=0.5077;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,2:3:5.97:58,6,0	./.	0/0:16,0:4:6.91:0,7,85	0/0:6,0:2:6.01:0,6,62	./.	0/0:1,0:1:0:0,0,0	0/0:4,0:2:3.01:0,3,32	0/0:7,0:7:6.38:0,6,48	./.	1/1:1,2:3:6.02:72,6,0	./.	0/1:2,1:3:8.83:33,0,9	./.	0/0:3,0:3:8.95:0,9,75	0/1:3,0:3:0.16:1,0,0	0/0:3,0:3:2.99:0,3,26	0/0:1,0:1:1.82:0,2,5	0/0:3,0:3:8.53:0,9,47	0/0:3,0:3:2.99:0,3,24	0/0:5,0:5:0.47:0,0,1	0/1:12,2:12:20.41:33,0,20	./.	0/0:1,0:1:3.01:0,3,42	1/1:2,1:3:5.19:27,5,0	1/1:2,1:2:3.01:39,3,0	1/1:3,0:3:2.90:16,3,0	0/0:1,0:1:2.97:0,3,20	0/0:4,0:4:4.25:0,4,29
chr10	54278616	.	T	TAGCAGCCAGC	16980.54	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-5.386;DP=589;FS=4.516;HRun=0;HaplotypeScore=174.9097;InbreedingCoeff=0.9184;MQ=76.12;MQ0=2;MQRankSum=-13.549;QD=49.36;ReadPosRankSum=-4.635;VQSLOD=3.2257;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:19,8:27:17.71:682,18,0	1/1:9,4:16:18.06:902,18,0	0/0:19,0:19:21.02:0,21,396	0/0:13,0:13:21.06:0,21,431	1/1:11,4:16:3.01:151,3,0	1/1:9,3:13:16.77:600,17,0	1/1:16,10:26:33.11:1584,33,0	1/1:29,0:29:27.06:722,27,0	1/1:16,7:23:30.10:1316,30,0	1/1:15,3:19:24.81:812,25,0	1/1:7,2:10:1.25:3,1,0	0/0:25,0:25:57.20:0,57,1695	0/0:25,0:25:66.23:0,66,2017	1/1:19,13:33:51.18:2534,51,0	1/1:11,10:20:30.10:1511,30,0	1/1:10,9:20:30.10:1508,30,0	1/1:15,10:27:27.09:1267,27,0	1/1:5,8:15:21.07:1060,21,0	0/0:22,0:22:36.10:0,36,794	0/0:15,0:15:27.08:0,27,736	0/0:31,0:31:72.23:0,72,2015	0/0:21,0:21:48.16:0,48,1383	0/0:13,0:13:24.08:0,24,730	0/0:26,0:26:60.21:0,60,1834	1/1:8,10:21:16.77:756,17,0	1/1:16,6:23:40.36:1422,40,0	0/0:35,0:35:69.21:0,69,1949	1/1:3,1:4:3.01:151,3,0
chr10	54279509	.	CT	C	1512.64	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=-3.556;DP=555;FS=18.410;HRun=7;HaplotypeScore=83.4269;InbreedingCoeff=0.7679;MQ=74.18;MQ0=0;MQRankSum=0.147;QD=14.54;ReadPosRankSum=0.160;VQSLOD=2.0295;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:38.89:0,39,186	0/0:5,0:5:8.66:0,9,57	0/1:19,0:14:15.40:15,0,84	0/0:14,0:9:8.02:0,8,46	0/0:28,0:28:32.44:0,32,113	0/0:21,0:21:25.65:0,26,148	0/0:16,0:16:19.84:0,20,50	0/0:31,0:31:47.38:0,47,237	0/0:10,0:10:5.89:0,6,45	0/0:25,0:25:36.75:0,37,190	0/0:25,0:25:26.14:0,26,144	0/0:14,0:14:42.11:0,42,491	0/0:12,0:12:33.03:0,33,348	0/0:14,0:14:15.01:0,15,100	0/0:20,0:20:18.83:0,19,44	0/0:12,0:12:10.91:0,11,46	0/0:30,0:30:32.93:0,33,149	0/0:30,0:30:41.28:0,41,225	1/1:3,12:15:39.02:373,39,0	1/1:3,25:28:68.54:580,69,0	1/1:1,17:18:33.06:329,33,0	0/0:6,0:6:18.04:0,18,194	0/0:12,0:12:30.53:0,31,326	0/0:15,0:15:34.06:0,34,350	0/0:36,0:36:58.94:0,59,216	0/0:29,0:29:51.26:0,51,309	1/1:9,15:24:39.03:378,39,0	0/0:7,0:7:2.25:0,2,8
chr10	54279516	.	TA	T	6650.77	PASS	AB=0.939;AC=40;AF=0.714;AN=56;BaseQRankSum=4.095;DP=579;FS=0.471;HRun=12;HaplotypeScore=64.3185;InbreedingCoeff=0.4124;MQ=68.61;MQ0=0;MQRankSum=0.839;QD=12.81;ReadPosRankSum=6.387;VQSLOD=4.7217;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,31:38:75.79:640,76,0	1/1:2,4:6:8.96:70,9,0	0/1:13,3:10:22.98:23,0,44	0/0:10,0:6:8.93:0,9,68	1/1:3,27:31:51.40:528,51,0	1/1:4,18:22:17.54:318,18,0	1/1:0,21:21:44.82:345,45,0	1/1:5,26:31:61.48:527,61,0	1/1:1,11:12:13.93:193,14,0	1/1:2,22:24:56.69:432,57,0	1/1:4,24:28:65.67:505,66,0	0/0:15,0:15:39.07:0,39,388	0/0:14,0:14:29.96:0,30,274	1/1:3,8:12:22.66:161,23,0	1/1:0,22:22:47.82:371,48,0	1/1:1,10:11:20.92:162,21,0	1/1:3,26:30:37.51:463,38,0	1/1:6,25:32:37.50:463,38,0	0/1:19,0:19:16.23:16,0,105	0/1:32,0:32:37.44:37,0,90	0/1:21,0:21:36:36,0,38	0/0:8,0:8:15:0,15,139	0/0:13,0:13:2.36:0,2,177	0/1:11,4:15:33.60:34,0,231	1/1:4,33:37:89.62:693,90,0	1/1:9,23:32:58.77:433,59,0	0/1:19,0:19:12.53:61,0,13	1/1:0,8:8:17.93:139,18,0
chr10	54280885	.	AAAAAC	A	8030.94	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=10.529;DP=744;FS=8.211;HRun=0;HaplotypeScore=142.3687;InbreedingCoeff=0.9840;MQ=66.99;MQ0=4;MQRankSum=1.401;QD=27.41;ReadPosRankSum=-0.229;VQSLOD=4.2073;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:75.26:0,75,2017	0/0:12,0:12:15.05:0,15,416	0/0:24,0:18:12.02:0,12,235	0/0:34,0:18:12.92:0,13,212	1/1:10,13:23:42.07:684,42,0	1/1:4,18:22:42.14:768,42,0	1/1:9,20:29:35.86:449,36,0	1/1:12,5:17:15.05:264,15,0	1/1:8,23:31:60.20:1098,60,0	1/1:13,19:32:54.16:924,54,0	1/1:10,16:26:45.11:787,45,0	0/0:29,0:29:63.22:0,63,1688	0/0:19,0:19:42.14:0,42,1153	1/1:7,15:22:39.13:714,39,0	1/1:12,19:31:36.02:620,36,0	0/0:29,0:29:57.20:0,57,1586	0/0:43,0:43:72.25:0,72,1943	0/0:33,0:33:72.25:0,72,1928	0/0:15,0:22:33.11:0,33,592	0/0:10,0:33:48.08:0,48,730	0/0:23,0:23:42.11:0,42,710	0/0:22,0:22:48.16:0,48,1226	0/0:27,0:27:48.16:0,48,1314	0/0:30,0:30:57.20:0,57,1573	1/1:10,10:20:24.04:404,24,0	1/1:8,21:29:63.14:990,63,0	0/0:10,0:31:15.05:0,15,234	1/1:3,8:11:18.06:329,18,0
chr10	54283884	.	CGAGAGACA	C	2452.31	PASS	AC=6;AF=0.111;AN=54;BaseQRankSum=9.070;DP=899;FS=8.729;HRun=0;HaplotypeScore=262.7624;InbreedingCoeff=0.9962;MQ=65.18;MQ0=2;MQRankSum=-4.397;QD=28.19;ReadPosRankSum=-0.066;VQSLOD=1.9431;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:59,0:59:99:0,168,5318	0/0:17,0:17:51.11:0,51,1389	0/0:40,0:27:19.05:0,19,394	0/0:46,0:33:51.49:0,51,1053	0/0:29,0:29:63.11:0,63,1855	0/0:27,0:27:63.13:0,63,1746	0/0:36,0:36:87.15:0,87,2221	0/0:29,0:29:66.14:0,66,1281	0/0:35,0:35:84.22:0,84,2474	0/0:26,0:26:66.20:0,66,2006	0/0:23,0:23:54.09:0,54,1374	0/0:35,0:35:99:0,99,3224	0/0:32,0:32:90.18:0,90,2919	0/0:40,0:40:96.24:0,96,3113	0/0:47,0:47:99:0,120,3053	0/0:34,0:34:99:0,99,3191	0/0:36,0:36:99:0,102,3107	0/0:39,0:39:96.64:0,97,2751	1/1:5,18:23:53.94:778,54,0	1/1:4,30:34:21.07:562,21,0	./.	0/0:17,0:17:39.04:0,39,877	0/0:20,0:20:45.13:0,45,1595	0/0:42,0:42:99:0,107,3710	0/0:26,0:26:66.62:0,67,1748	0/0:37,0:37:78.91:0,79,2585	1/1:3,27:30:48.53:1253,49,0	0/0:15,0:15:39.12:0,39,1452
chr10	54284109	.	G	GC	20794.11	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=-17.592;DP=768;FS=0.000;HRun=2;HaplotypeScore=70.0138;InbreedingCoeff=0.9944;MQ=72.83;MQ0=0;MQRankSum=-5.955;QD=38.51;ReadPosRankSum=2.163;VQSLOD=5.4627;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,39:41:99:1425,99,0	1/1:1,12:13:33.11:475,33,0	0/0:36,0:36:97.95:0,98,1163	0/0:25,0:25:63.95:0,64,761	1/1:0,33:33:90.30:1295,90,0	1/1:1,16:17:48.16:691,48,0	1/1:3,35:38:99:1481,105,0	1/1:2,21:23:63.18:870,63,0	1/1:0,18:18:51.17:734,51,0	1/1:1,22:23:63.21:907,63,0	1/1:2,24:26:69.23:993,69,0	0/0:35,0:35:99:0,102,1250	0/0:37,0:37:99:0,108,1337	1/1:1,27:28:78.26:1123,78,0	1/1:1,23:24:65.89:950,66,0	1/1:0,25:25:75.25:1080,75,0	1/1:1,35:36:99:1469,102,0	1/1:0,22:22:66.22:951,66,0	1/1:1,15:16:42.14:605,42,0	1/1:2,19:21:54.18:777,54,0	1/1:1,48:49:99:1771,123,0	0/0:32,0:32:87.26:0,87,1074	0/0:24,0:24:66.21:0,66,818	0/0:39,0:39:99:0,117,1437	1/1:0,21:21:54.18:778,54,0	1/1:0,29:29:87.29:1253,87,0	1/1:1,28:29:69.23:993,69,0	1/1:2,6:8:12.04:173,12,0
chr10	54285226	.	G	GACAC	3227.04	PASS	AB=0.777;AC=37;AF=0.712;AN=52;BaseQRankSum=2.202;DP=578;FS=0.000;HRun=0;HaplotypeScore=119.3481;InbreedingCoeff=0.3645;MQ=65.67;MQ0=9;MQRankSum=-2.267;QD=7.38;ReadPosRankSum=-1.176;VQSLOD=2.4200;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:21,9:33:9.03:179,9,0	1/1:8,0:8:2.53:35,3,0	./.	./.	1/1:11,10:20:2.88:70,3,0	1/1:16,1:29:15.05:265,15,0	1/1:20,0:22:3:53,3,0	1/1:34,0:34:14.53:136,15,0	1/1:8,1:14:11.93:227,12,0	1/1:16,0:15:10.79:118,11,0	0/1:7,1:15:0:0,0,1	0/0:10,0:11:2.48:0,2,166	0/0:11,0:12:2.48:0,2,123	1/1:9,0:9:6.88:72,7,0	1/1:9,7:18:3.01:71,3,0	1/1:6,7:14:15.05:360,15,0	1/1:15,12:32:38.60:792,39,0	1/1:6,6:12:9.46:162,9,0	0/1:8,0:8:31.43:45,0,31	0/1:16,0:18:3.53:4,0,58	0/1:27,1:46:66.13:66,0,108	0/0:13,0:15:12.02:0,12,147	0/0:13,0:15:17.87:0,18,236	0/0:38,0:39:63.20:0,63,955	1/1:15,1:26:8.86:175,9,0	1/1:15,1:23:28.01:425,28,0	0/1:10,0:24:62.29:79,0,62	1/1:5,5:8:3.01:52,3,0
chr10	54286664	.	A	AGCCT	4610.22	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-7.639;DP=576;FS=3.027;HRun=0;HaplotypeScore=97.1934;InbreedingCoeff=0.9666;MQ=72.17;MQ0=0;MQRankSum=-1.460;QD=50.11;ReadPosRankSum=-0.514;VQSLOD=5.6710;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,102,1813	0/0:2,0:2:6.02:0,6,110	0/0:11,0:11:30.10:0,30,543	0/0:7,0:7:15.05:0,15,256	0/0:21,0:21:63.22:0,63,1154	0/0:13,0:13:36.12:0,36,658	0/0:33,0:33:90.31:0,90,1627	0/0:26,0:26:66.21:0,66,1182	0/0:17,0:17:48.15:0,48,849	0/0:16,0:16:48.16:0,48,882	0/0:15,0:15:39.12:0,39,679	0/0:31,0:31:81.26:0,81,1453	0/0:12,0:12:36.12:0,36,652	0/0:12,0:12:36.11:0,36,632	0/0:10,0:10:30.10:0,30,552	0/0:15,0:15:45.14:0,45,795	0/0:37,0:37:99:0,99,1757	0/0:37,0:37:99:0,108,1945	1/1:7,11:20:48.12:1106,48,0	1/1:5,13:18:36.12:848,36,0	1/1:7,29:36:61.76:1643,62,0	0/0:14,0:14:33.10:0,33,571	0/0:12,0:12:36.11:0,36,632	0/0:43,0:43:99:0,111,2010	0/0:27,0:27:81.26:0,81,1454	0/0:26,0:25:75.25:0,75,1346	1/1:1,15:18:38.39:1013,38,0	0/0:13,0:13:39.13:0,39,718
chr10	54289780	.	CA	C	1153.54	PASS	AB=0.875;AC=34;AF=0.773;AN=44;BaseQRankSum=-0.106;DP=339;FS=1.166;HRun=1;HaplotypeScore=60.8366;InbreedingCoeff=0.1450;MQ=21.33;MQ0=137;MQRankSum=2.317;QD=4.27;ReadPosRankSum=0.356;VQSLOD=0.3160;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,6:8:7.70:84,8,0	1/1:1,3:4:1.51:77,2,0	./.	./.	1/1:8,1:14:1.25:3,1,0	1/1:12,3:7:11.36:73,11,0	1/1:8,0:11:2.98:22,3,0	1/1:11,1:6:6.44:87,6,0	./.	0/1:15,1:10:27.19:141,0,27	1/1:10,0:9:1.96:6,2,0	0/1:18,3:7:6.87:61,0,7	0/0:21,1:11:10.53:0,11,127	1/1:15,0:2:2.99:23,3,0	0/1:5,2:6:17.53:33,0,18	1/1:1,7:8:11.81:143,12,0	1/1:5,3:4:6.02:83,6,0	1/1:11,7:5:11.97:143,12,0	./.	0/1:6,1:3:0.04:0,0,0	./.	1/1:10,1:5:3.62:12,4,0	./.	0/1:14,1:8:0:0,0,0	1/1:10,1:13:10.69:57,11,0	0/1:22,2:12:16.06:156,0,16	0/0:3,0:1:2.88:0,3,15	1/1:5,1:4:8.96:70,9,0
chr10	54292485	.	G	GTGTC	5632.45	PASS	AB=0.805;AC=42;AF=0.750;AN=56;BaseQRankSum=3.324;DP=787;FS=3.961;HRun=0;HaplotypeScore=173.9728;InbreedingCoeff=0.6598;MQ=59.78;MQ0=4;MQRankSum=-4.825;QD=9.50;ReadPosRankSum=-2.234;VQSLOD=4.0646;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:13,2:32:9.52:99,10,0	1/1:2,0:9:6.02:103,6,0	0/0:33,0:28:26.58:0,27,355	0/1:50,0:30:7.35:7,0,347	1/1:7,0:19:5.75:52,6,0	1/1:9,1:31:14.98:147,15,0	1/1:33,0:34:12.52:250,13,0	1/1:40,0:40:13.05:120,13,0	1/1:2,1:19:3.01:52,3,0	1/1:20,1:49:46.96:397,47,0	1/1:5,0:15:5.03:30,5,0	0/0:38,0:38:84.27:0,84,1360	0/0:33,0:33:75.24:0,75,1202	1/1:8,1:25:9.03:153,9,0	1/1:11,1:32:18.04:259,18,0	1/1:29,0:28:3.86:135,4,0	1/1:21,0:21:16.47:268,16,0	1/1:8,0:8:5.96:44,6,0	1/1:9,11:20:21.88:713,22,0	1/1:16,7:23:36.12:815,36,0	0/1:14,24:37:12.14:774,0,12	0/0:21,0:21:45.14:0,45,715	0/0:25,0:24:51.16:0,51,811	0/0:44,0:44:87.30:0,87,1416	1/1:8,1:26:6:75,6,0	1/1:11,0:29:14.99:364,15,0	1/1:10,11:21:21.07:514,21,0	1/1:6,0:19:15.05:262,15,0
chr10	54292583	.	G	GTC	4606.49	PASS	AB=0.882;AC=36;AF=0.643;AN=56;BaseQRankSum=8.441;DP=657;FS=2.757;HRun=0;HaplotypeScore=142.0604;InbreedingCoeff=0.5349;MQ=57.54;MQ0=19;MQRankSum=-5.689;QD=11.26;ReadPosRankSum=-0.602;VQSLOD=4.3281;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,3:15:15.05:239,15,0	1/1:6,0:6:6.02:100,6,0	0/0:33,0:13:12.09:0,12,118	0/0:49,0:22:19.24:0,19,173	0/1:19,5:24:5.60:141,0,6	0/1:17,3:18:13.70:27,0,14	1/1:25,0:25:9.02:110,9,0	1/1:21,1:21:33.05:451,33,0	1/1:14,1:15:12.04:174,12,0	1/1:23,5:25:48.23:626,48,0	0/1:10,1:11:0:0,0,0	0/0:33,0:33:48.63:0,49,977	0/0:29,0:29:74.83:0,75,926	1/1:14,1:15:8.95:79,9,0	1/1:17,5:22:9.33:313,9,0	1/1:16,2:18:12.04:199,12,0	0/1:23,6:27:44.48:315,0,44	1/1:6,12:16:9.03:150,9,0	0/1:21,1:19:8.07:353,0,8	1/1:30,1:31:6.02:100,6,0	1/1:16,1:13:9.02:120,9,0	0/0:31,0:30:66.20:0,66,823	0/0:26,0:26:42.13:0,42,534	0/0:47,0:43:75.24:0,75,954	1/1:15,1:16:8.49:71,8,0	0/1:22,3:24:3.83:389,0,4	1/1:12,6:17:32.51:541,33,0	1/1:9,0:9:9.03:108,9,0
chr10	54292589	.	CTCTCTGTCTG	C	4666.87	PASS	AB=0.915;AC=36;AF=0.643;AN=56;BaseQRankSum=9.603;DP=614;FS=2.046;HRun=0;HaplotypeScore=188.1793;InbreedingCoeff=0.5238;MQ=55.39;MQ0=23;MQRankSum=-6.444;QD=12.38;ReadPosRankSum=-1.916;VQSLOD=3.7800;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:12,3:12:15.03:191,15,0	1/1:2,2:4:9.02:140,9,0	0/0:23,0:7:14.02:0,14,197	0/0:44,0:18:20.70:0,21,245	0/1:26,0:25:28.17:82,0,28	1/1:19,0:16:6.89:62,7,0	1/1:23,0:23:8.87:146,9,0	1/1:17,0:16:32.88:289,33,0	1/1:14,0:14:11.35:183,11,0	1/1:29,0:26:32.55:671,33,0	0/1:10,0:10:0:0,0,0	0/0:34,0:34:20.83:0,21,2770	0/0:32,0:31:81.64:0,82,2817	1/1:17,0:16:11.63:87,12,0	1/1:20,0:20:9.27:212,9,0	1/1:6,12:18:12.04:272,12,0	0/1:25,1:24:99:297,0,162	0/1:17,0:15:36.05:114,0,36	1/1:17,3:16:11.75:362,12,0	0/1:3,26:29:7.49:66,0,7	1/1:16,0:12:9:95,9,0	0/0:31,0:30:69.22:0,69,2341	0/0:24,0:24:45.15:0,45,1445	0/0:48,0:43:70.69:0,71,2796	1/1:16,0:15:8.49:71,8,0	0/1:20,0:19:7.59:555,0,8	1/1:14,2:15:35.77:621,36,0	1/1:5,0:5:9.02:150,9,0
chr10	54292593	.	CTGTCTG	C	4781.39	PASS	AB=0.892;AC=37;AF=0.661;AN=56;BaseQRankSum=8.049;DP=594;FS=2.101;HRun=0;HaplotypeScore=151.4489;InbreedingCoeff=0.4537;MQ=53.04;MQ0=24;MQRankSum=-6.216;QD=12.92;ReadPosRankSum=-3.897;VQSLOD=3.1707;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:11:10.99:78,11,0	1/1:3,0:4:6.46:62,6,0	0/0:18,0:4:5.11:0,5,164	0/0:37,0:15:13.20:0,13,278	0/1:17,10:26:18.54:184,0,19	1/1:11,5:13:8.68:73,9,0	1/1:3,21:23:9.03:181,9,0	1/1:2,11:12:36.07:542,36,0	1/1:5,9:14:11.47:234,11,0	1/1:20,8:25:40.81:1001,41,0	1/1:6,4:10:3:25,3,0	0/0:34,1:34:12.36:0,12,2493	0/0:31,0:30:81.60:0,82,2480	1/1:12,6:17:11.89:96,12,0	1/1:17,6:23:27.96:449,28,0	1/1:17,0:17:9.78:118,10,0	0/1:22,0:23:96.98:97,0,160	0/1:18,0:15:35.69:47,0,36	0/1:14,0:11:26.72:174,0,27	0/1:29,0:29:9.67:25,0,10	1/1:12,0:10:6.43:47,6,0	0/0:29,0:28:69.22:0,69,2165	0/0:22,0:23:45.15:0,45,1427	0/0:50,0:45:70.69:0,71,2589	1/1:9,7:15:12.01:146,12,0	1/1:13,8:19:0.67:748,1,0	1/1:14,0:14:23.13:267,23,0	1/1:0,5:5:9.03:185,9,0
chr10	54292605	.	CTGTCTG	C	1488.70	PASS	AB=0.918;AC=23;AF=0.426;AN=54;BaseQRankSum=10.078;DP=567;FS=2.525;HRun=0;HaplotypeScore=150.4006;InbreedingCoeff=0.1734;MQ=43.77;MQ0=41;MQRankSum=-8.823;QD=5.01;ReadPosRankSum=-0.943;VQSLOD=2.7319;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:15,1:12:2.96:0,3,39	0/1:6,0:8:27.83:37,0,28	0/0:9,0:2:3.48:0,3,56	0/1:19,0:6:8.27:8,0,52	1/1:21,2:23:6.07:27,6,0	1/1:15,1:12:5.97:57,6,0	1/1:24,0:23:5.98:67,6,0	1/1:15,0:13:10.03:74,10,0	1/1:13,2:15:8.32:90,8,0	1/1:19,2:19:39.41:531,39,0	./.	0/0:32,0:30:26.07:0,26,1560	0/0:30,0:27:71.78:0,72,1669	0/1:12,5:16:5.46:42,0,5	0/0:15,4:18:1.03:0,1,3	0/1:17,0:17:18.59:19,0,27	0/1:22,2:19:67.97:68,0,262	0/0:17,0:11:8.47:0,8,91	0/1:17,0:11:28.30:28,0,111	0/1:30,2:30:3.75:4,0,34	0/0:17,0:8:2.67:0,3,38	0/0:26,0:25:60.17:0,60,1398	0/0:21,0:21:39.13:0,39,864	0/0:54,0:49:60.01:0,60,1707	0/0:12,4:14:0:0,0,0	0/1:17,3:18:38.14:443,0,38	0/1:19,0:16:83.65:84,0,158	1/1:5,0:5:8.24:77,8,0
chr10	54292611	.	G	GTC	399.95	PASS	AB=0.993;AC=28;AF=0.538;AN=52;BaseQRankSum=8.439;DP=542;FS=10.546;HRun=0;HaplotypeScore=129.8858;InbreedingCoeff=0.3697;MQ=36.63;MQ0=45;MQRankSum=-7.632;QD=1.21;ReadPosRankSum=-4.402;VQSLOD=0.2555;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:16,0:11:0:0,0,0	0/0:10,0:10:0.65:0,1,13	0/0:5,0:1:3.01:0,3,43	./.	1/1:23,0:21:4.51:18,5,0	0/1:14,0:9:1.45:1,0,5	1/1:21,0:18:5.70:31,6,0	0/1:14,0:11:4.38:4,0,15	1/1:14,0:14:7.77:40,8,0	1/1:21,0:18:12.74:102,13,0	./.	0/0:35,0:31:60.79:0,61,911	0/0:32,0:28:75.03:0,75,994	1/1:17,0:16:3.01:47,3,0	1/1:17,0:14:0.47:1,0,0	1/1:17,0:17:5.22:43,5,0	0/1:25,0:20:16.28:16,0,114	0/1:16,0:10:11.99:12,0,37	0/0:15,0:9:14.43:0,14,101	1/1:31,1:30:2.37:7,2,0	0/1:15,1:7:0:0,0,0	0/0:24,0:23:51.17:0,51,730	0/0:21,0:21:36.09:0,36,477	0/0:50,0:45:48.07:0,48,858	0/1:17,0:15:0.02:0,0,0	0/1:25,0:21:62.98:79,0,63	1/1:16,5:19:11.62:138,12,0	1/1:4,0:4:3.67:12,4,0
chr10	54292617	.	CTG	C	1310.70	PASS	AB=0.958;AC=25;AF=0.481;AN=52;BaseQRankSum=9.665;DP=554;FS=0.000;HRun=0;HaplotypeScore=119.0007;InbreedingCoeff=0.2269;MQ=34.59;MQ0=53;MQRankSum=-7.266;QD=4.35;ReadPosRankSum=-1.398;VQSLOD=2.7351;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:16,0:10:0.04:0,0,0	0/1:9,0:9:3.35:9,0,3	0/0:3,0:1:2.97:0,3,20	./.	1/1:12,11:21:2.04:6,2,0	1/1:11,5:11:4.61:32,5,0	1/1:16,9:21:5.09:70,5,0	0/1:14,3:13:68.38:118,0,68	1/1:7,9:16:12:118,12,0	1/1:13,8:18:28.03:372,28,0	./.	0/0:36,1:32:25.53:0,26,1053	0/0:33,0:26:66.88:0,67,1116	1/1:15,4:17:2.96:19,3,0	0/0:10,7:14:0.47:0,0,1	1/1:13,0:12:5.88:35,6,0	0/1:24,0:17:13.94:14,0,150	0/1:17,0:11:8.96:9,0,50	0/1:17,0:11:33.63:34,0,105	0/0:31,0:29:1.33:0,1,7	0/1:17,0:7:0:0,0,0	0/0:24,1:24:51.14:0,51,900	0/0:20,0:20:30.10:0,30,530	0/0:49,2:46:27.64:0,28,1091	0/0:14,7:19:0:0,0,0	0/1:19,8:22:55.87:379,0,56	0/1:19,0:17:12.65:146,0,13	1/1:2,3:4:8.62:100,9,0
chr10	54292621	.	CTG	C	415.75	PASS	AB=0.988;AC=28;AF=0.560;AN=50;BaseQRankSum=9.429;DP=575;FS=0.635;HRun=0;HaplotypeScore=130.3818;InbreedingCoeff=0.2272;MQ=33.71;MQ0=58;MQRankSum=-6.759;QD=1.21;ReadPosRankSum=-1.026;VQSLOD=2.4474;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:17,1:11:0.04:0,0,0	1/1:10,0:10:10.64:64,11,0	./.	./.	1/1:23,1:22:1.55:4,2,0	1/1:18,0:13:4.92:41,5,0	1/1:25,0:21:3.26:18,3,0	1/1:19,0:15:7.97:25,8,0	1/1:18,0:18:3.68:16,4,0	0/1:23,1:20:34.41:80,0,34	./.	0/0:34,1:30:37.41:0,37,372	0/0:34,0:26:42.13:0,42,407	1/1:21,0:19:2.22:8,2,0	1/1:20,0:17:0.93:2,1,0	0/1:14,0:13:4.91:27,0,5	0/1:24,0:17:18.11:31,0,18	0/0:16,0:9:2.05:0,2,10	0/1:17,0:12:33.63:34,0,47	0/0:31,0:29:2.67:0,3,15	0/1:17,0:7:0:0,0,0	0/0:25,0:24:44.62:0,45,346	0/0:22,0:22:21.26:0,21,170	0/0:53,0:48:55.52:0,56,461	1/1:25,1:23:2.58:16,3,0	0/1:25,0:20:39.58:95,0,40	0/1:18,0:16:8.67:81,0,9	1/1:7,0:4:5.34:21,5,0
chr10	54294177	.	TCTCTCTCC	T	2157.12	PASS	AB=0.966;AC=31;AF=0.554;AN=56;BaseQRankSum=5.206;DP=491;FS=8.535;HRun=0;HaplotypeScore=126.9788;InbreedingCoeff=-0.0442;MQ=48.62;MQ0=30;MQRankSum=1.856;QD=5.29;ReadPosRankSum=-0.357;VQSLOD=1.9854;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:33:26.13:26,0,54	1/1:8,0:7:8.30:55,8,0	0/1:10,0:4:1.71:2,0,43	0/1:17,0:4:1.13:1,0,30	0/1:14,0:14:10.09:11,0,10	1/1:17,0:15:6.95:50,7,0	1/1:19,0:15:36.76:220,37,0	0/1:30,0:30:47.26:188,0,47	0/1:19,0:16:12.57:20,0,13	0/1:20,0:20:36.18:163,0,36	1/1:13,0:13:6.37:56,6,0	0/0:23,0:23:62.37:0,62,868	0/0:15,0:13:27.39:0,27,314	1/1:19,0:18:23.34:161,23,0	0/1:5,13:18:8.23:228,0,8	0/1:26,0:26:93.61:157,0,94	1/1:25,0:24:19.68:240,20,0	0/1:15,0:14:53.80:130,0,54	0/1:9,0:6:27.15:27,0,30	0/1:14,0:13:15.36:15,0,234	0/1:17,0:16:20.62:21,0,212	0/0:13,0:13:21.99:0,22,226	0/0:12,0:11:24.01:0,24,360	0/0:20,0:20:42.59:0,43,756	1/1:16,0:15:1.40:83,1,0	1/1:19,0:17:16.81:327,17,0	0/1:15,0:14:37.96:38,0,208	0/1:13,0:13:7.37:114,0,7
chr10	54294179	.	TCTCTCC	T	2122.87	PASS	AB=0.971;AC=30;AF=0.536;AN=56;BaseQRankSum=4.472;DP=492;FS=2.747;HRun=0;HaplotypeScore=116.4676;InbreedingCoeff=0.0334;MQ=48.78;MQ0=28;MQRankSum=1.454;QD=5.68;ReadPosRankSum=0.253;VQSLOD=1.9196;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:0.37:0,0,92	1/1:7,0:6:8.30:55,8,0	0/1:11,0:4:1.71:2,0,43	0/1:16,0:4:1.13:1,0,30	1/1:14,0:14:2.06:17,2,0	0/1:16,0:14:8.32:8,0,10	1/1:20,0:16:36.44:196,36,0	0/1:31,0:31:43.85:201,0,44	0/1:6,14:17:3.72:78,0,4	1/1:19,1:20:7.02:379,7,0	1/1:13,0:13:5.58:37,6,0	0/0:25,0:25:68.06:0,68,780	0/0:14,0:12:26.91:0,27,254	1/1:19,0:18:23.38:164,23,0	0/1:18,0:18:8.23:132,0,8	0/1:26,0:26:3.54:141,0,4	0/1:26,0:25:18.83:130,0,19	0/1:16,0:15:62.93:95,0,63	0/1:8,0:5:27.15:27,0,30	0/1:13,0:12:29.89:30,0,74	0/1:17,0:16:22.64:23,0,145	0/0:14,0:14:25.41:0,25,225	0/0:14,0:13:26.55:0,27,363	0/0:19,0:19:25.98:0,26,551	1/1:15,0:14:22.14:191,22,0	1/1:19,0:17:16.84:253,17,0	0/1:15,0:14:68.01:68,0,97	0/1:14,0:13:8.61:68,0,9
chr10	54294180	.	CTCT	C	44.81	PASS	AB=0.974;AC=10;AF=0.179;AN=56;BaseQRankSum=7.601;DP=500;FS=22.201;HRun=0;HaplotypeScore=111.0590;InbreedingCoeff=0.1564;MQ=51.43;MQ0=28;MQRankSum=-4.532;QD=0.28;ReadPosRankSum=-1.337;VQSLOD=0.2439;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:32,0:32:8.11:8,0,66	0/0:8,0:7:15.36:0,15,70	0/0:13,0:5:14.57:0,15,117	0/1:17,0:5:12.16:12,0,76	0/0:14,0:14:2.52:0,3,16	0/0:16,0:14:5.64:0,6,48	0/0:20,0:16:12.11:0,12,70	0/0:32,0:32:78.74:0,79,499	1/1:19,1:17:3.88:27,4,0	0/1:18,2:20:43.26:43,0,205	0/0:14,0:14:4.29:0,4,22	0/0:25,0:25:57.51:0,58,763	0/0:14,0:12:24.50:0,24,280	0/0:19,0:18:16.09:0,16,95	1/1:18,0:18:11.10:61,11,0	0/1:26,0:26:10:10,0,72	0/0:26,0:25:45.17:0,45,234	0/0:16,0:15:2.38:0,2,95	0/0:8,0:5:14.38:0,14,125	0/0:14,0:13:21.37:0,21,171	0/0:17,0:16:30.75:0,31,312	0/0:13,0:13:20:0,20,221	0/0:14,0:13:27:0,27,333	0/0:21,0:21:40.61:0,41,451	0/1:14,1:14:16.06:16,0,29	0/0:19,0:17:20.59:0,21,177	0/0:15,0:14:33.82:0,34,309	0/1:14,0:13:4.96:5,0,20
chr10	54294186	.	CCCT	C	272.54	PASS	AB=0.955;AC=16;AF=0.286;AN=56;BaseQRankSum=4.045;DP=524;FS=2.548;HRun=0;HaplotypeScore=111.2124;InbreedingCoeff=0.1135;MQ=53.59;MQ0=28;MQRankSum=-2.074;QD=1.05;ReadPosRankSum=-2.127;VQSLOD=1.9769;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:30:2.75:0,3,16	0/0:8,0:7:2.21:0,2,17	0/0:21,0:11:31.85:0,32,481	0/1:20,0:8:15.15:15,0,307	1/1:14,0:14:9.57:73,10,0	0/0:18,0:16:1.83:0,2,3	1/1:20,0:17:10.79:79,11,0	0/0:32,0:32:20.35:0,20,280	0/1:20,1:18:5.11:5,0,6	0/1:19,2:21:7.01:7,0,161	0/1:16,1:17:0.26:15,0,0	0/0:27,0:27:67.04:0,67,1415	0/0:18,0:16:37.86:0,38,673	0/1:23,0:22:16.29:33,0,16	1/1:17,2:19:4.28:55,4,0	0/1:25,2:27:37.43:37,0,74	0/1:23,2:25:23.15:23,0,53	0/1:14,1:14:8.97:32,0,9	0/0:8,0:4:4.45:0,4,43	0/0:13,0:12:6.51:0,7,27	0/0:14,0:13:5.74:0,6,38	0/0:14,0:14:27.77:0,28,552	0/0:14,0:13:26.30:0,26,654	0/0:21,0:21:47.37:0,47,949	0/1:15,1:15:7.75:48,0,8	0/1:21,0:19:5.59:6,0,85	0/0:12,0:11:10.48:0,10,84	0/0:15,0:14:3.74:0,4,12
chr10	54294187	.	CCT	C	5456.21	PASS	AC=40;AF=0.741;AN=54;BaseQRankSum=1.858;DP=520;FS=9.830;HRun=0;HaplotypeScore=86.8701;InbreedingCoeff=0.8808;MQ=53.88;MQ0=27;MQRankSum=-2.356;QD=14.75;ReadPosRankSum=-0.844;VQSLOD=3.5424;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,22:30:4.33:31,4,0	1/1:8,0:7:14.77:174,15,0	0/0:23,0:11:18.89:0,19,312	0/0:20,0:8:14.09:0,14,199	1/1:2,11:13:20.55:150,21,0	1/1:4,12:14:3:36,3,0	1/1:20,0:17:45.05:518,45,0	1/1:9,23:32:52.26:759,52,0	1/1:21,0:18:11.63:73,12,0	1/1:8,13:21:32.72:414,33,0	1/1:3,14:17:5.82:54,6,0	0/0:27,0:27:66.75:0,67,874	0/0:18,0:16:32.74:0,33,425	1/1:22,1:22:44.73:484,45,0	1/1:19,0:19:14.69:137,15,0	1/1:6,21:27:17.80:210,18,0	1/1:19,5:24:54.29:603,54,0	1/1:5,10:14:12.35:151,12,0	1/1:5,3:4:9.03:110,9,0	1/1:11,1:12:26.64:293,27,0	1/1:14,0:13:22.81:261,23,0	0/0:14,0:14:27.09:0,27,404	0/0:14,0:13:26.32:0,26,437	0/0:21,0:21:47.76:0,48,667	1/1:19,0:18:33.59:401,34,0	1/1:6,13:18:32.86:347,33,0	1/1:12,0:11:9.23:250,9,0	./.
chr10	54294317	.	C	CCCCTGCA	6710.92	PASS	AB=1.000;AC=25;AF=0.446;AN=56;BaseQRankSum=-3.402;DP=651;FS=14.072;HRun=0;HaplotypeScore=149.6528;InbreedingCoeff=0.8582;MQ=78.15;MQ0=0;MQRankSum=-8.453;QD=25.42;ReadPosRankSum=-4.108;VQSLOD=2.6014;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:90.06:0,90,1696	0/0:14,0:14:12:0,12,225	0/0:26,0:25:11.70:0,12,86	0/1:29,0:29:15.06:15,0,42	1/1:7,7:16:5.93:40,6,0	1/1:4,5:10:9.03:330,9,0	1/1:17,0:17:23.97:519,24,0	1/1:16,0:16:9:124,9,0	1/1:14,16:33:36.12:1210,36,0	1/1:13,8:24:39.08:1067,39,0	1/1:11,6:18:6.02:220,6,0	0/0:30,0:30:42.10:0,42,849	0/0:21,0:21:42.01:0,42,853	1/1:18,8:28:30.10:946,30,0	1/1:11,7:21:21.07:638,21,0	0/0:20,0:20:30.02:0,30,567	0/0:23,0:23:41.99:0,42,638	0/0:29,0:29:53.99:0,54,980	0/0:17,0:17:14.94:0,15,340	0/0:19,0:19:24.08:0,24,527	0/0:51,0:50:71.91:0,72,1365	0/0:18,0:18:39.04:0,39,767	0/0:17,0:17:27.08:0,27,542	0/0:38,0:38:81.25:0,81,1667	1/1:11,6:18:12.04:389,12,0	1/1:13,9:24:36.01:910,36,0	0/0:17,0:17:23.94:0,24,404	1/1:8,2:10:8.72:304,9,0
chr10	54302490	.	A	AAAAAAAACCAAAAAC	31483.98	PASS	AB=0.929;AC=43;AF=0.768;AN=56;BaseQRankSum=4.083;DP=547;FS=65.395;HRun=0;HaplotypeScore=222.2407;InbreedingCoeff=0.9107;MQ=64.02;MQ0=0;MQRankSum=-10.931;QD=71.72;ReadPosRankSum=-0.511;VQSLOD=1.9656;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:24:30.10:1035,30,0	1/1:11,0:11:30.10:1240,30,0	0/0:14,0:12:20.89:0,21,443	0/1:12,0:10:3.63:4,0,91	1/1:16,0:30:44.30:1330,44,0	1/1:6,0:21:24.08:1125,24,0	1/1:14,0:14:36.11:1549,36,0	1/1:35,0:35:87.24:2665,87,0	1/1:19,0:20:54.15:2363,54,0	1/1:6,0:18:37.05:1393,37,0	1/1:13,0:13:36.08:1437,36,0	0/0:23,0:23:47.74:0,48,1661	0/0:19,0:19:44.85:0,45,1588	1/1:4,1:16:12.04:593,12,0	1/1:12,0:27:36.11:1609,36,0	1/1:3,1:22:12.04:718,12,0	1/1:19,0:19:45.10:1810,45,0	1/1:3,1:19:15.05:940,15,0	1/1:25,0:23:63.04:1943,63,0	1/1:16,0:16:45.15:2078,45,0	1/1:7,0:7:17.98:194,18,0	0/0:21,0:21:57.04:0,57,1480	0/0:24,0:24:65.02:0,65,1956	0/0:7,0:7:14.91:0,15,597	1/1:24,0:23:66.11:2454,66,0	1/1:13,0:13:33.11:1328,33,0	1/1:26,0:26:69.16:2642,69,0	1/1:8,0:21:24.08:1033,24,0
chr10	54303218	.	T	TTGTGTGTGTGTGTG	9754.53	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=5.951;DP=837;FS=18.825;HRun=0;HaplotypeScore=288.0843;InbreedingCoeff=0.8086;MQ=50.12;MQ0=23;MQRankSum=-6.186;QD=18.83;ReadPosRankSum=-3.922;VQSLOD=1.5010;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:45,0:43:28.34:459,28,0	1/1:7,0:7:9.03:156,9,0	0/0:75,0:28:8.84:0,9,76	0/0:78,0:18:5.69:0,6,300	1/1:22,0:21:18.06:398,18,0	1/1:6,12:22:3.01:126,3,0	1/1:25,0:25:26.74:569,27,0	1/1:34,0:32:54.16:1282,54,0	1/1:23,0:23:11.37:367,11,0	1/1:25,0:25:36.12:1031,36,0	1/1:4,0:13:8.83:263,9,0	0/0:29,0:30:57.05:0,57,1570	0/0:33,0:37:71.56:0,72,2216	1/1:16,0:27:2.27:23,2,0	1/1:5,13:21:5.30:207,5,0	1/1:11,0:29:6.02:147,6,0	1/1:29,0:29:24.06:439,24,0	1/1:25,0:25:7.94:547,8,0	1/1:27,0:26:45.06:748,45,0	1/1:25,0:24:17.75:389,18,0	1/1:43,0:43:14.47:301,14,0	0/0:28,0:28:63.22:0,63,2178	0/0:17,0:17:29.98:0,30,832	0/0:47,0:53:99:0,102,3525	1/1:16,0:16:11.65:247,12,0	1/1:29,0:28:54.17:1255,54,0	1/1:17,0:17:27.96:423,28,0	1/1:3,5:11:9.03:379,9,0
chr10	54304803	.	T	TC	9690.51	PASS	AB=0.900;AC=43;AF=0.768;AN=56;BaseQRankSum=-10.932;DP=423;FS=30.248;HRun=8;HaplotypeScore=38.1033;InbreedingCoeff=0.8763;MQ=89.01;MQ0=0;MQRankSum=-5.565;QD=28.50;ReadPosRankSum=2.510;VQSLOD=2.9966;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,36:39:99:1241,108,0	1/1:1,5:6:12.04:138,12,0	0/0:22,0:22:28.99:0,29,408	0/0:11,0:11:17.79:0,18,196	1/1:3,10:13:30.09:346,30,0	1/1:2,18:20:51.15:588,51,0	1/1:1,11:12:30.09:346,30,0	1/1:11,15:26:41.95:441,42,0	1/1:2,8:10:27.08:311,27,0	1/1:2,11:13:27.08:311,27,0	1/1:1,10:11:30.09:346,30,0	0/0:19,0:19:54.03:0,54,494	0/0:12,0:12:36.02:0,36,330	1/1:2,13:15:42.12:481,42,0	1/1:0,8:8:24.07:277,24,0	1/1:1,10:11:5.63:319,6,0	1/1:3,13:16:36.11:415,36,0	1/1:0,26:26:78.23:900,78,0	1/1:2,14:16:44.79:486,45,0	1/1:0,9:9:24.07:277,24,0	1/1:0,16:16:36.11:416,36,0	0/0:6,0:6:18.01:0,18,165	0/0:13,0:13:39.02:0,39,357	0/1:8,1:9:10.61:11,0,168	1/1:0,16:16:45.13:515,45,0	1/1:0,23:23:66.20:762,66,0	1/1:1,17:18:48.14:554,48,0	1/1:0,7:7:18.05:208,18,0
chr10	54305081	.	ACC	A	10777.73	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=-0.605;DP=545;FS=6.787;HRun=10;HaplotypeScore=72.4373;InbreedingCoeff=0.9735;MQ=80.15;MQ0=5;MQRankSum=-3.110;QD=25.01;ReadPosRankSum=5.876;VQSLOD=4.3593;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:6,31:37:87.22:970,87,0	1/1:4,3:7:8.99:100,9,0	0/0:19,0:17:24.13:0,24,299	0/0:18,0:16:24.01:0,24,306	1/1:1,12:13:27.05:301,27,0	1/1:4,16:20:51.12:566,51,0	1/1:3,13:17:30:393,30,0	1/1:8,15:23:45.09:492,45,0	1/1:2,27:29:75.20:833,75,0	1/1:3,17:20:48.12:534,48,0	1/1:3,11:14:24.05:264,24,0	0/0:16,0:18:46.51:0,47,516	0/0:11,0:12:32.59:0,33,458	1/1:4,30:34:81.22:902,81,0	1/1:1,17:17:45.12:502,45,0	1/1:1,16:17:33.09:368,33,0	1/1:3,25:28:63.16:702,63,0	1/1:1,15:15:30.07:334,30,0	1/1:2,18:20:48.09:526,48,0	1/1:1,9:10:27.07:294,27,0	1/1:5,29:34:72.18:802,72,0	0/0:8,0:9:15.01:0,15,191	0/0:10,0:12:23.56:0,24,308	0/0:24,0:25:64.43:0,64,808	1/1:2,11:13:24.06:268,24,0	1/1:8,17:25:56.59:591,57,0	1/1:2,30:31:84.22:936,84,0	1/1:0,4:4:9.02:100,9,0
chr10	54305090	.	CCA	C	2659.22	PASS	AB=1.000;AC=35;AF=0.625;AN=56;BaseQRankSum=10.548;DP=526;FS=19.279;HRun=0;HaplotypeScore=96.4877;InbreedingCoeff=0.4772;MQ=78.78;MQ0=5;MQRankSum=-3.330;QD=6.52;ReadPosRankSum=9.266;VQSLOD=1.0023;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:33,1:34:52.37:267,52,0	1/1:4,0:4:7.85:34,8,0	0/0:18,0:16:8.19:0,8,281	0/0:18,0:16:38.38:0,38,366	0/1:15,0:15:27.82:63,0,28	1/1:17,0:17:44.13:192,44,0	0/1:17,0:17:37.27:69,0,37	1/1:16,1:17:5.81:91,6,0	1/1:30,1:31:25.87:248,26,0	1/1:17,0:17:34.53:152,35,0	0/1:12,0:12:1.19:68,0,1	0/0:18,0:17:34.46:0,34,332	0/0:17,0:17:41.29:0,41,478	1/1:32,0:32:50.18:308,50,0	0/1:20,0:19:1.06:120,0,1	1/1:17,0:17:11.34:85,11,0	1/1:26,1:27:3.07:179,3,0	0/1:17,0:16:14.01:70,0,14	0/1:20,0:20:4.92:99,0,5	1/1:10,0:10:22:82,22,0	1/1:32,0:32:24.56:187,25,0	0/0:10,0:10:16.96:0,17,193	0/0:14,0:14:26.61:0,27,270	0/0:23,0:23:34.25:0,34,556	1/1:11,0:11:19.60:75,20,0	1/1:18,1:19:38.73:176,39,0	1/1:33,0:32:16.04:261,16,0	0/1:6,0:6:26.42:26,0,30
chr10	54306038	.	TC	T	1781.51	PASS	AB=0.942;AC=13;AF=0.232;AN=56;BaseQRankSum=-2.389;DP=503;FS=10.850;HRun=11;HaplotypeScore=70.8404;InbreedingCoeff=0.5676;MQ=77.65;MQ0=1;MQRankSum=-0.865;QD=10.07;ReadPosRankSum=6.255;VQSLOD=1.5612;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:13,24:37:56.90:467,57,0	1/1:4,8:12:14.97:123,15,0	0/0:27,0:24:7.03:0,7,232	0/1:22,3:23:17.07:17,0,207	0/1:17,0:17:6.72:7,0,97	0/1:13,1:14:6.81:7,0,123	0/0:8,0:14:17.75:0,18,144	0/0:15,0:21:15.92:0,16,111	0/0:6,0:19:11.68:0,12,85	0/0:11,1:19:1.83:0,2,153	0/0:2,0:8:8.68:0,9,55	0/0:19,0:19:15.01:0,15,148	0/0:20,4:24:11.49:0,11,316	0/0:12,0:16:11.71:0,12,78	0/0:8,0:15:5.84:0,6,40	1/1:2,26:29:73.95:597,74,0	1/1:5,19:24:50.93:419,51,0	1/1:5,14:19:38.95:320,39,0	0/0:8,0:9:18.91:0,19,130	0/0:6,0:6:5.99:0,6,50	0/0:15,0:21:5.54:0,6,43	0/0:14,0:14:12.03:0,12,128	0/0:15,0:16:20.87:0,21,196	0/0:16,0:16:33.04:0,33,334	0/0:6,0:13:8.96:0,9,70	0/0:9,0:17:20.56:0,21,155	0/0:9,0:22:17.27:0,17,105	0/0:2,0:10:5.68:0,6,28
chr10	54306856	.	G	GA	14044.45	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=-14.112;DP=638;FS=18.314;HRun=8;HaplotypeScore=55.9475;InbreedingCoeff=0.9992;MQ=81.76;MQ0=0;MQRankSum=-4.675;QD=28.09;ReadPosRankSum=3.254;VQSLOD=3.4544;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,39:41:99:1246,108,0	1/1:1,14:15:39.12:450,39,0	0/0:18,0:18:45:0,45,409	0/0:17,0:17:42.01:0,42,379	1/1:3,28:32:81.03:900,81,0	1/1:2,24:26:63.19:727,63,0	1/1:3,14:17:39.06:434,39,0	1/1:2,35:37:99:1135,102,0	1/1:3,15:18:42.12:484,42,0	1/1:1,23:24:69.21:797,69,0	1/1:2,11:14:30.09:345,30,0	0/0:25,0:25:65.96:0,66,581	0/0:17,0:17:45:0,45,407	1/1:3,16:19:45.13:519,45,0	1/1:1,22:23:51.15:589,51,0	1/1:3,17:20:23.69:527,24,0	1/1:4,27:31:66.20:762,66,0	1/1:1,21:22:51.15:587,51,0	1/1:0,24:24:72.21:831,72,0	1/1:2,11:13:30.09:346,30,0	1/1:4,14:18:33.10:381,33,0	0/0:22,0:22:62.95:0,63,566	0/0:16,0:16:32.04:0,32,280	0/0:23,0:23:57.02:0,57,522	1/1:1,26:27:72.21:831,72,0	1/1:5,28:33:59.79:942,60,0	1/1:2,23:26:66.20:761,66,0	1/1:0,20:20:39.12:450,39,0
chr10	54307219	.	TAC	T	7058.32	PASS	AB=0.606;AC=32;AF=0.571;AN=56;BaseQRankSum=10.378;DP=683;FS=16.154;HRun=0;HaplotypeScore=145.2133;InbreedingCoeff=0.7117;MQ=51.07;MQ0=16;MQRankSum=-1.498;QD=18.48;ReadPosRankSum=2.121;VQSLOD=4.1713;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,28:33:75.18:880,75,0	1/1:3,2:5:3.01:36,3,0	0/0:35,0:5:9.03:0,9,138	0/0:38,0:6:8.90:0,9,100	1/1:8,17:25:30.09:359,30,0	1/1:3,14:17:28.91:307,29,0	1/1:6,20:25:29.98:340,30,0	1/1:6,4:10:12.04:144,12,0	1/1:9,29:39:67.82:753,68,0	1/1:8,11:19:44.16:501,44,0	1/1:4,11:15:21.06:252,21,0	0/0:31,0:31:36.31:0,36,768	0/0:17,0:17:19.07:0,19,508	1/1:3,25:27:60.18:719,60,0	1/1:1,20:23:32.71:351,33,0	1/1:6,18:25:41.94:466,42,0	0/1:10,20:30:14.73:327,0,15	1/1:2,12:15:36.07:415,36,0	0/0:24,0:23:42.11:0,42,603	0/0:18,1:19:45.15:0,45,716	0/0:38,0:38:1.60:0,2,692	0/0:13,2:15:0.16:0,0,492	0/0:14,1:15:0.15:0,0,465	0/0:46,2:46:81.41:0,81,1747	0/1:12,21:33:8.82:393,0,9	1/1:8,15:23:44.97:513,45,0	0/0:21,0:21:30.06:0,30,385	1/1:4,8:13:26.91:302,27,0
chr10	54307246	.	GCACACACACACACACA	G	5745.39	PASS	AB=0.838;AC=29;AF=0.537;AN=54;BaseQRankSum=6.252;DP=631;FS=34.117;HRun=0;HaplotypeScore=279.6487;InbreedingCoeff=0.6210;MQ=46.63;MQ0=20;MQRankSum=-5.476;QD=16.56;ReadPosRankSum=-0.793;VQSLOD=2.6239;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:35:5.40:5,0,615	0/0:3,0:3:3.01:0,3,69	0/0:22,0:2:3.01:0,3,69	./.	1/1:14,5:20:6.49:121,6,0	1/1:16,4:21:15.05:557,15,0	1/1:29,1:28:8.99:310,9,0	0/0:9,0:9:1.55:0,2,4	1/1:24,11:36:48.16:1710,48,0	1/1:14,10:24:14.57:362,15,0	1/1:11,1:13:7.79:136,8,0	0/0:29,0:33:48.11:0,48,2363	0/0:17,0:20:52.06:0,52,2865	1/1:26,3:28:18.05:611,18,0	1/1:19,5:24:17.93:705,18,0	0/1:13,0:19:24.74:25,0,158	0/0:22,0:23:26.01:0,26,336	0/0:12,0:15:26.67:0,27,515	1/1:8,1:9:6.01:164,6,0	0/1:17,0:20:17.68:18,0,363	0/0:35,0:47:12.46:0,12,238	0/0:14,0:16:24.08:0,24,1333	0/0:15,0:17:24.08:0,24,1567	0/0:42,0:46:83.97:0,84,4414	1/1:15,3:18:9.50:368,10,0	1/1:17,2:18:11.62:368,12,0	1/1:3,0:16:14.54:155,15,0	1/1:7,1:8:3.01:133,3,0
chr10	54308130	.	C	CT	2252.15	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-8.999;DP=642;FS=6.803;HRun=9;HaplotypeScore=65.8295;InbreedingCoeff=0.9982;MQ=77.32;MQ0=0;MQRankSum=-0.130;QD=22.08;ReadPosRankSum=-0.047;VQSLOD=4.3546;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:36:85.94:0,86,723	0/0:10,0:10:26.97:0,27,228	0/0:17,0:17:22.88:0,23,161	0/0:15,0:15:24.56:0,25,169	0/0:28,0:28:65.95:0,66,569	0/0:20,0:20:56.94:0,57,483	0/0:30,0:30:89.92:0,90,767	0/0:43,0:43:99:0,111,952	0/0:23,0:23:65.96:0,66,569	0/0:21,0:21:56.97:0,57,492	0/0:15,0:15:41.99:0,42,365	0/0:19,0:19:50.99:0,51,443	0/0:21,0:21:47.98:0,48,417	0/0:18,0:18:50.96:0,51,436	0/0:23,0:23:59.93:0,60,511	0/0:26,0:26:71.93:0,72,616	0/0:33,0:33:80.86:0,81,683	0/0:13,0:13:29.96:0,30,260	1/1:5,16:21:53.93:570,54,0	1/1:5,25:30:72.15:782,72,0	1/1:4,14:19:33.09:365,33,0	0/0:18,0:18:41.95:0,42,365	0/0:21,0:21:62.98:0,63,545	0/0:24,0:24:68.99:0,69,599	0/0:15,0:15:35.97:0,36,313	0/0:31,0:31:77.96:0,78,672	1/1:4,28:32:63.17:695,63,0	0/0:20,0:20:44.97:0,45,391
chr10	54308486	.	TATGC	T	4846.54	PASS	AB=0.978;AC=27;AF=0.482;AN=56;BaseQRankSum=-3.952;DP=674;FS=8.290;HRun=0;HaplotypeScore=137.6526;InbreedingCoeff=-0.1087;MQ=72.70;MQ0=3;MQRankSum=-3.607;QD=9.48;ReadPosRankSum=1.746;VQSLOD=3.8496;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:13,23:36:15.52:257,16,0	1/1:0,11:11:14.89:256,15,0	0/0:12,0:12:2.26:0,2,32	0/0:14,0:14:0.89:0,1,2	0/1:30,0:30:99:190,0,578	0/1:21,1:22:99:198,0,318	0/1:22,0:22:99:186,0,185	1/1:34,0:34:81.34:712,81,0	0/1:22,0:22:99:134,0,125	0/1:28,0:28:99:268,0,419	0/1:16,0:16:99:100,0,302	0/0:19,0:19:6.04:0,6,726	0/0:37,0:37:87.55:0,88,1655	0/1:24,3:27:99:288,0,400	0/1:26,1:27:99:206,0,530	1/1:8,17:25:24.08:409,24,0	1/1:6,16:21:18.06:307,18,0	1/1:6,15:21:14.12:540,14,0	0/1:20,0:20:18.47:18,0,194	0/1:28,0:28:34.77:35,0,135	0/1:23,0:23:0.18:0,0,173	0/0:27,0:27:71.30:0,71,1210	0/0:27,0:27:75.04:0,75,1193	0/0:27,0:27:59.88:0,60,1025	0/1:21,1:21:99:132,0,362	0/1:41,1:42:99:418,0,543	0/1:22,0:22:50.38:50,0,120	0/1:10,1:10:28.06:143,0,28
chr10	54308497	.	G	GCATA	413.94	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=-3.263;DP=693;FS=14.402;HRun=0;HaplotypeScore=167.7988;InbreedingCoeff=0.4769;MQ=66.79;MQ0=4;MQRankSum=0.164;QD=6.37;ReadPosRankSum=-2.887;VQSLOD=1.3817;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:24.01:0,24,218	0/0:12,0:12:16.27:0,16,147	0/0:10,0:8:5.29:0,5,53	0/0:7,0:6:1.78:0,2,5	0/0:32,0:32:34.48:0,34,517	0/0:24,0:24:20.97:0,21,371	0/0:18,0:18:2.30:0,2,142	0/1:41,0:40:92.94:93,0,135	1/1:7,16:24:18.01:424,18,0	0/0:34,0:34:31.03:0,31,513	0/0:23,0:23:38.67:0,39,389	0/0:21,0:21:57.15:0,57,923	0/0:35,0:35:99:0,99,1643	0/0:28,0:28:17.61:0,18,396	0/0:30,0:30:38.51:0,39,546	0/0:22,0:22:30.03:0,30,281	0/0:21,0:20:24.01:0,24,219	0/0:20,0:20:38.88:0,39,384	0/0:19,0:19:48.08:0,48,664	0/0:34,0:34:42.13:0,42,665	0/0:22,0:22:39.09:0,39,613	0/0:26,0:26:72.20:0,72,1151	0/0:30,0:30:84.24:0,84,1377	0/0:28,0:28:72.16:0,72,1101	0/0:21,0:20:16.99:0,17,346	0/0:43,0:43:9.05:0,9,557	0/0:23,0:23:50.82:0,51,819	0/0:15,0:15:30.38:0,30,245
chr10	54308501	.	GCATACATA	G	1927.67	PASS	AB=1.000;AC=9;AF=0.167;AN=54;BaseQRankSum=3.040;DP=690;FS=3.475;HRun=0;HaplotypeScore=204.1348;InbreedingCoeff=0.8338;MQ=62.00;MQ0=4;MQRankSum=-5.566;QD=16.76;ReadPosRankSum=1.584;VQSLOD=3.0868;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:30.10:0,30,488	0/0:12,0:12:15.05:0,15,227	0/0:8,0:5:6.02:0,6,105	./.	0/0:33,0:33:72.23:0,72,2271	0/0:24,0:24:51.16:0,51,1626	0/0:19,0:19:25.91:0,26,822	0/0:42,0:41:51.12:0,51,1065	0/0:25,0:25:30.07:0,30,777	0/0:31,0:31:60.21:0,60,2114	0/0:23,0:23:51.16:0,51,1557	0/0:21,0:23:45.13:0,45,1271	0/0:34,0:34:75.16:0,75,2651	0/0:28,0:28:63.22:0,63,1880	0/0:30,0:30:69.24:0,69,2301	0/0:20,0:20:33.11:0,33,585	0/0:23,0:22:33.11:0,33,570	0/0:20,0:20:39.60:0,40,605	1/1:9,5:15:18.06:412,18,0	1/1:8,27:35:21.07:531,21,0	1/1:22,0:23:17.31:367,17,0	0/0:27,0:27:51.13:0,51,1740	0/0:31,0:31:54.19:0,54,1900	0/0:27,0:27:48.16:0,48,1800	0/0:20,0:19:45.15:0,45,1470	0/0:42,0:42:84.27:0,84,2656	1/1:7,15:22:30.05:759,30,0	0/1:20,0:19:19.20:19,0,754
chr10	54310883	.	A	ATGTG	14443.77	PASS	AB=1.000;AC=35;AF=0.625;AN=56;BaseQRankSum=-2.260;DP=756;FS=6.090;HRun=0;HaplotypeScore=180.2370;InbreedingCoeff=0.9460;MQ=55.96;MQ0=3;MQRankSum=-2.167;QD=28.05;ReadPosRankSum=1.071;VQSLOD=4.4047;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,12:25:18.50:430,19,0	1/1:1,11:12:21.05:470,21,0	0/1:12,0:7:2.08:2,0,89	0/0:17,0:14:15.84:0,16,131	1/1:10,18:30:22.40:592,22,0	1/1:11,24:36:44.72:953,45,0	1/1:4,21:26:27.04:666,27,0	1/1:20,23:43:67.71:1252,68,0	1/1:9,24:33:53.77:1292,54,0	1/1:18,22:43:70.91:1696,71,0	1/1:10,19:29:17.38:381,17,0	0/0:21,0:21:33.11:0,33,554	0/0:29,0:29:54.17:0,54,875	1/1:14,29:45:47.20:1178,47,0	1/1:11,20:31:30.10:743,30,0	1/1:11,16:28:42.39:1001,42,0	1/1:12,6:18:27.01:562,27,0	1/1:8,10:19:24.97:597,25,0	0/0:9,0:9:24.03:0,24,335	0/0:25,0:26:57.13:0,57,860	0/0:37,0:37:62.30:0,62,990	0/0:26,0:27:69.21:0,69,1084	0/0:18,0:19:38.30:0,38,541	0/0:27,0:28:53.86:0,54,843	1/1:16,9:26:29.44:428,29,0	1/1:13,24:38:80.11:1612,80,0	0/0:27,0:27:23.56:0,24,358	1/1:11,6:17:21.36:586,21,0
chr10	54310921	.	GAGAC	G	1809.32	PASS	AB=0.983;AC=19;AF=0.339;AN=56;BaseQRankSum=-1.801;DP=617;FS=8.668;HRun=0;HaplotypeScore=173.9350;InbreedingCoeff=0.0697;MQ=58.53;MQ0=6;MQRankSum=-2.825;QD=5.50;ReadPosRankSum=1.895;VQSLOD=2.1310;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:20:21.74:0,22,195	0/0:12,0:12:20.68:0,21,146	0/0:27,0:19:33.12:0,33,309	0/0:28,0:16:1.58:0,2,130	0/1:25,0:25:62.50:63,0,158	0/1:36,0:35:41.50:42,0,244	0/1:21,0:21:25.05:106,0,25	0/0:26,0:25:53.26:0,53,402	0/0:29,1:30:14.08:0,14,417	0/1:28,1:29:99:226,0,268	0/1:20,0:20:16.69:17,0,159	0/0:15,0:15:21.15:0,21,236	0/0:21,0:21:43.71:0,44,366	0/1:27,0:27:99:152,0,140	0/1:20,3:23:99:164,0,134	0/0:28,0:28:6.08:0,6,349	0/1:15,0:15:84.56:85,0,134	0/0:12,0:12:18.94:0,19,157	1/1:6,0:6:7.24:93,7,0	1/1:27,0:27:47.23:370,47,0	1/1:24,0:22:28.95:229,29,0	0/0:29,0:29:44.04:0,44,474	0/0:16,0:16:11.71:0,12,310	0/0:23,0:23:38.60:0,39,424	0/1:17,0:15:99:125,0,102	0/1:24,1:25:99:163,0,226	1/1:5,23:28:15.91:144,16,0	0/1:6,0:5:9.66:10,0,46
chr10	54310923	.	GAC	G	1732.29	PASS	AB=0.978;AC=21;AF=0.375;AN=56;BaseQRankSum=-2.965;DP=612;FS=13.341;HRun=0;HaplotypeScore=155.7860;InbreedingCoeff=0.0656;MQ=58.68;MQ0=6;MQRankSum=-1.245;QD=4.48;ReadPosRankSum=1.693;VQSLOD=1.9195;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:20,1:20:69:75,0,69	0/1:12,0:12:0.34:0,0,104	0/0:26,0:18:32.76:0,33,308	0/0:27,0:15:2.31:0,2,134	0/1:26,0:26:21.56:22,0,196	0/1:33,2:35:99:221,0,103	0/1:21,1:22:17.79:18,0,48	0/0:26,0:25:44.05:0,44,417	0/1:30,0:30:49.16:49,0,257	0/1:27,1:28:0.96:1,0,334	0/0:21,0:21:15.07:0,15,174	0/0:15,0:15:26.20:0,26,191	0/0:21,0:21:20.93:0,21,270	0/1:24,2:26:78.31:78,0,150	0/1:21,1:22:7.32:7,0,159	0/1:28,0:28:99:111,0,139	0/0:15,0:15:24.53:0,25,179	0/1:12,0:12:6.02:6,0,132	1/1:6,0:6:12.43:109,12,0	1/1:22,3:25:48.51:566,49,0	1/1:20,3:21:42.19:377,42,0	0/0:28,0:28:25.21:0,25,340	0/1:17,0:17:31.32:31,0,239	0/0:23,0:23:36.73:0,37,322	0/0:16,1:15:19.58:0,20,146	0/1:26,0:26:4.83:5,0,286	1/1:25,3:28:23.60:230,24,0	0/0:6,0:5:13.64:0,14,68
chr10	54310925	.	CAGAG	C	2285.01	PASS	AB=0.850;AC=25;AF=0.481;AN=52;BaseQRankSum=-3.564;DP=618;FS=1.400;HRun=0;HaplotypeScore=170.2141;InbreedingCoeff=0.2586;MQ=58.32;MQ0=6;MQRankSum=-0.930;QD=5.92;ReadPosRankSum=0.260;VQSLOD=2.8789;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:20:17.03:0,17,111	0/1:12,1:14:7.52:8,0,29	./.	./.	1/1:23,2:26:24.46:227,24,0	0/1:29,1:37:99:119,0,116	1/1:19,1:21:21.06:285,21,0	0/1:27,0:26:0.21:16,0,0	0/1:25,0:30:20.81:21,0,72	1/1:22,7:29:34.14:475,34,0	1/1:19,2:21:3.01:31,3,0	0/0:10,0:15:8.69:0,9,108	0/0:20,0:21:18.04:0,18,240	1/1:25,1:26:7.91:137,8,0	1/1:20,1:22:20.84:219,21,0	0/1:16,1:27:36.03:36,0,86	1/1:11,6:17:14.70:200,15,0	0/1:9,0:11:19.45:19,0,23	0/0:6,0:6:8.88:0,9,65	0/0:25,0:25:20.61:0,21,152	0/0:23,0:20:14.96:0,15,120	0/0:19,0:29:24.90:0,25,217	0/0:17,0:17:7.96:0,8,155	0/0:22,0:22:11.91:0,12,222	0/1:9,8:15:72.09:255,0,72	0/1:21,5:26:11.07:331,0,11	0/1:29,0:29:37.85:38,0,61	1/1:5,1:5:3.01:47,3,0
chr10	54311546	.	A	AATTCATTC	8720.98	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=3.400;DP=758;FS=6.528;HRun=0;HaplotypeScore=198.8289;InbreedingCoeff=0.9596;MQ=70.38;MQ0=3;MQRankSum=-12.162;QD=38.25;ReadPosRankSum=-3.536;VQSLOD=3.5060;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:24:24.08:703,24,0	1/1:12,0:16:23.91:628,24,0	0/0:28,0:23:3:0,3,28	0/0:25,0:22:9.02:0,9,146	0/0:38,0:39:72.24:0,72,1666	0/0:22,0:22:57.16:0,57,1306	0/0:21,0:21:36.11:0,36,839	0/0:36,0:36:45.12:0,45,860	0/0:23,0:23:51.16:0,51,1196	0/0:32,0:32:72.24:0,72,1705	0/0:34,0:34:63.21:0,63,1513	0/0:24,0:24:45.15:0,45,1076	0/0:26,0:26:39.11:0,39,878	0/0:27,0:27:54.17:0,54,1248	0/0:35,0:35:78.22:0,78,1805	1/1:18,0:28:30.99:1009,31,0	1/1:20,0:27:24.08:819,24,0	1/1:16,1:19:21.07:752,21,0	1/1:26,0:32:27.08:758,27,0	1/1:17,16:36:53.98:1867,54,0	1/1:8,6:15:15.05:600,15,0	0/0:40,0:40:72.25:0,72,1763	0/0:22,0:22:39.08:0,39,876	0/0:25,0:25:51.09:0,51,1120	0/0:28,0:28:48.15:0,48,1153	0/0:24,0:24:33.10:0,33,750	1/1:18,12:30:39.13:1585,39,0	0/0:19,0:18:45.13:0,45,932
chr10	54313466	.	A	AT	4091.14	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-12.886;DP=705;FS=0.000;HRun=8;HaplotypeScore=64.0795;InbreedingCoeff=0.9991;MQ=74.14;MQ0=0;MQRankSum=-0.876;QD=27.83;ReadPosRankSum=3.650;VQSLOD=3.9106;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,37:38:93.28:1073,93,0	1/1:5,12:17:36.11:415,36,0	0/0:21,0:21:37.76:0,38,396	0/0:14,0:14:34.23:0,34,297	0/0:25,0:25:57.01:0,57,518	0/0:12,0:12:33.01:0,33,302	0/0:21,0:21:54:0,54,488	0/0:37,0:37:84.03:0,84,768	0/0:23,0:23:66.02:0,66,598	0/0:20,0:20:57.03:0,57,521	0/0:19,0:19:23.30:0,23,460	0/0:27,0:27:74.97:0,75,673	0/0:30,0:30:90.01:0,90,810	0/0:22,0:22:54.03:0,54,494	0/0:22,0:22:63.03:0,63,575	1/1:5,23:28:35.74:665,36,0	1/1:1,33:34:99:1143,99,0	1/1:2,28:30:69.20:795,69,0	0/0:22,0:22:63.02:0,63,569	0/0:27,0:27:66.01:0,66,604	0/0:22,0:22:54.03:0,54,494	0/0:34,0:34:93.05:0,93,851	0/0:22,0:22:60.03:0,60,549	0/0:35,0:35:99:0,105,955	0/0:28,0:27:75.03:0,75,686	0/0:33,0:33:81.02:0,81,736	0/0:29,0:29:84.03:0,84,763	0/0:13,0:13:30.01:0,30,275
chr10	54314631	.	C	CA	22371.52	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=-17.098;DP=771;FS=0.302;HRun=2;HaplotypeScore=66.8728;InbreedingCoeff=0.9994;MQ=78.32;MQ0=0;MQRankSum=-5.511;QD=39.11;ReadPosRankSum=2.153;VQSLOD=5.3862;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,39:43:99:1599,111,0	1/1:0,10:10:27.09:389,27,0	0/0:18,0:18:51.11:0,51,596	0/0:19,0:19:57.18:0,57,703	1/1:2,26:28:75.25:1080,75,0	1/1:0,24:24:72.24:1037,72,0	1/1:1,27:28:75.25:1080,75,0	1/1:2,40:42:99:1708,120,0	1/1:0,26:26:72.24:1037,72,0	1/1:0,31:31:93.31:1340,93,0	1/1:0,23:23:57.19:821,57,0	0/0:39,0:39:99:0,108,1313	0/0:39,0:39:99:0,114,1400	1/1:1,27:28:66.22:951,66,0	1/1:3,26:29:78.26:1123,78,0	1/1:1,26:27:75.25:1080,75,0	1/1:0,27:27:81.27:1167,81,0	1/1:1,14:15:42.14:594,42,0	1/1:3,22:25:69.23:991,69,0	1/1:3,32:35:90.30:1296,90,0	1/1:2,45:47:99:1858,129,0	0/0:38,0:38:99:0,111,1372	0/0:23,0:23:69.22:0,69,855	0/0:23,0:23:63.20:0,63,781	1/1:0,21:21:60.20:864,60,0	1/1:2,29:31:87.28:1233,87,0	1/1:2,21:23:54.18:778,54,0	1/1:0,9:9:24.08:346,24,0
chr10	54314759	.	T	TC	19453.49	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=-8.787;DP=728;FS=0.312;HRun=3;HaplotypeScore=78.7609;InbreedingCoeff=0.9983;MQ=88.44;MQ0=0;MQRankSum=-6.243;QD=37.20;ReadPosRankSum=2.583;VQSLOD=5.1858;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,40:42:99:1638,117,0	1/1:1,10:11:27.09:372,27,0	0/0:35,0:35:73.61:0,74,1027	0/0:27,0:27:63.18:0,63,738	1/1:1,19:21:57.19:788,57,0	1/1:3,17:20:48.16:672,48,0	1/1:1,19:20:57.19:798,57,0	1/1:2,36:38:99:1393,105,0	1/1:0,19:19:57.19:797,57,0	1/1:1,30:31:87.27:1195,87,0	1/1:0,12:12:33.11:461,33,0	0/0:41,0:41:99:0,120,1425	0/0:29,0:29:87.25:0,87,1030	1/1:2,27:29:66.22:924,66,0	1/1:1,33:34:87.29:1218,87,0	1/1:1,19:20:51.17:714,51,0	1/1:0,32:32:87.29:1218,87,0	1/1:0,15:15:39.13:546,39,0	1/1:3,24:27:72.21:984,72,0	1/1:2,24:26:72.22:989,72,0	1/1:0,31:31:87.29:1218,87,0	0/0:19,0:19:51.16:0,51,611	0/0:26,0:26:63.17:0,63,733	0/0:28,0:28:72.21:0,72,850	1/1:1,21:22:60.20:840,60,0	1/1:2,32:34:96.28:1306,96,0	1/1:2,28:31:81.27:1127,81,0	1/1:0,8:8:18.06:252,18,0
chr10	54315843	.	ATGTG	A	1958.81	PASS	AC=32;AF=0.727;AN=44;BaseQRankSum=-0.749;DP=138;FS=7.658;HRun=0;HaplotypeScore=25.9410;InbreedingCoeff=0.6250;MQ=102.51;MQ0=4;MQRankSum=-5.294;QD=26.12;ReadPosRankSum=-0.253;VQSLOD=1.7437;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,0:8:18.05:261,18,0	./.	0/0:13,0:11:27.08:0,27,457	0/0:17,0:11:29.24:0,29,332	./.	1/1:2,0:2:3.01:49,3,0	1/1:4,0:4:9.02:124,9,0	1/1:1,7:8:24.06:358,24,0	1/1:4,0:4:5.96:45,6,0	1/1:4,0:4:8.98:95,9,0	./.	0/0:8,0:8:9.03:0,9,146	0/0:7,0:7:6.02:0,6,96	1/1:3,0:3:3.01:48,3,0	./.	./.	1/1:9,0:9:9.03:120,9,0	1/1:6,0:4:9.02:115,9,0	1/1:0,5:5:15.05:227,15,0	1/1:3,0:3:3.01:40,3,0	1/1:3,0:3:9.01:119,9,0	./.	0/0:5,0:5:3.01:0,3,36	0/0:2,0:2:3.01:0,3,43	1/1:4,0:4:3.01:48,3,0	1/1:2,0:2:3.01:49,3,0	1/1:5,0:5:15.05:187,15,0	1/1:5,0:5:15.05:222,15,0
chr10	54315925	.	AGAGAAG	A	657.78	PASS	AB=1.000;AC=26;AF=0.765;AN=34;BaseQRankSum=-0.284;DP=127;FS=14.135;HRun=0;HaplotypeScore=74.9164;InbreedingCoeff=0.2585;MQ=87.36;MQ0=9;MQRankSum=-0.211;QD=8.12;ReadPosRankSum=1.495;VQSLOD=0.7255;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:2,2:4:2.58:32,3,0	1/1:3,0:2:2.50:9,2,0	0/1:15,0:4:2.86:3,0,91	0/0:32,0:14:6.14:0,6,161	./.	1/1:5,0:5:11.45:120,11,0	./.	1/1:9,1:8:1.04:211,1,0	./.	1/1:2,1:3:4.04:16,4,0	./.	1/1:6,0:6:5.66:40,6,0	1/1:5,0:5:2.89:20,3,0	1/1:1,0:1:2.99:24,3,0	./.	./.	0/0:3,0:3:3.85:0,4,22	1/1:3,0:3:4.26:43,4,0	1/1:0,3:3:9.03:142,9,0	./.	./.	1/1:11,0:11:4.93:27,5,0	0/1:9,0:9:0.87:14,0,1	0/0:5,0:5:0:0,0,0	./.	1/1:2,1:3:6.86:59,7,0	./.	./.
chr10	54315929	.	AAG	A	610.07	PASS	AB=1.000;AC=28;AF=0.824;AN=34;BaseQRankSum=-0.321;DP=124;FS=16.225;HRun=0;HaplotypeScore=71.0914;InbreedingCoeff=0.1903;MQ=88.34;MQ0=8;MQRankSum=-0.232;QD=7.44;ReadPosRankSum=1.472;VQSLOD=1.5052;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,0:3:2.60:22,3,0	1/1:3,0:2:2.22:7,2,0	0/1:15,0:4:2.86:3,0,107	0/0:32,0:14:0.82:0,1,149	./.	1/1:4,0:5:11.25:93,11,0	./.	1/1:5,4:8:15.05:192,15,0	./.	1/1:2,0:3:5.59:35,6,0	./.	1/1:6,0:6:5.67:40,6,0	1/1:5,0:5:3.89:22,4,0	1/1:1,0:1:2.99:23,3,0	./.	./.	1/1:1,1:3:2.50:9,2,0	1/1:3,0:3:4.74:21,5,0	1/1:3,0:3:9.03:125,9,0	./.	./.	1/1:11,0:11:5.97:33,6,0	0/1:9,0:9:0.97:14,0,1	0/0:5,0:5:0:0,0,0	./.	1/1:2,1:3:8.32:63,8,0	./.	./.
chr10	54315938	.	T	TATATATAG	2702.05	PASS	AB=0.979;AC=26;AF=0.591;AN=44;BaseQRankSum=2.876;DP=198;FS=0.000;HRun=0;HaplotypeScore=112.9840;InbreedingCoeff=0.2981;MQ=72.24;MQ0=4;MQRankSum=0.212;QD=26.75;ReadPosRankSum=1.843;VQSLOD=3.2610;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,1:7:2.35:80,2,0	1/1:5,1:6:3.01:90,3,0	0/1:11,0:4:0.93:1,0,66	0/0:32,0:14:2.80:0,3,87	0/0:6,0:6:0:0,0,0	1/1:2,4:6:11.39:337,11,0	1/1:4,0:4:3.01:108,3,0	0/1:12,0:12:35.53:414,0,36	1/1:2,0:2:3.01:109,3,0	0/1:6,1:7:1.41:408,0,1	./.	0/0:10,0:10:23.88:0,24,443	0/0:6,0:6:14.69:0,15,300	1/1:5,1:6:6.02:171,6,0	./.	1/1:3,0:3:3.01:108,3,0	1/1:7,1:8:8.06:215,8,0	0/1:4,0:4:8.13:90,0,8	0/1:6,0:6:26.37:242,0,26	./.	./.	0/0:15,0:15:26.66:0,27,540	0/0:12,0:12:11.87:0,12,226	0/1:5,0:5:0:0,0,0	./.	1/1:9,0:9:18.40:382,18,0	1/1:5,0:5:3.01:88,3,0	./.
chr10	54316021	.	TAC	T	1242.96	PASS	AB=0.833;AC=31;AF=0.596;AN=52;BaseQRankSum=1.539;DP=412;FS=0.000;HRun=0;HaplotypeScore=136.2513;InbreedingCoeff=0.2555;MQ=62.95;MQ0=2;MQRankSum=0.150;QD=4.84;ReadPosRankSum=0.893;VQSLOD=3.0832;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:12,9:21:14.96:44,0,15	1/1:4,0:4:2.84:14,3,0	./.	./.	0/1:10,0:10:19.34:19,0,38	0/1:6,1:8:35.88:38,0,36	0/1:8,4:12:24.13:24,0,55	1/1:24,0:24:5.93:39,6,0	1/1:17,1:20:18.12:131,18,0	1/1:6,4:10:8.99:81,9,0	1/1:3,8:11:6.01:66,6,0	0/1:14,0:15:14.74:15,0,178	0/0:9,0:9:8.62:0,9,99	1/1:7,2:9:12.01:115,12,0	1/1:6,5:12:11.87:113,12,0	1/1:9,5:14:9.02:99,9,0	0/1:9,7:16:9.63:205,0,10	1/1:5,4:10:10.07:110,10,0	0/0:6,0:6:5.75:0,6,39	0/0:8,0:9:3:0,3,26	0/0:14,0:28:18:0,18,183	0/0:18,0:19:9.70:0,10,181	0/0:16,0:16:14.79:0,15,191	0/0:18,2:20:0.01:0,0,323	1/1:16,0:16:3:26,3,0	1/1:12,6:18:18.01:177,18,0	0/1:16,1:19:3.11:3,0,247	1/1:3,3:8:11.70:94,12,0
chr10	54317676	.	GCGCTCGTTCTCTCTCTCTCTCT	G	13566.54	PASS	AC=38;AF=0.731;AN=52;BaseQRankSum=1.273;DP=443;FS=0.000;HRun=0;HaplotypeScore=223.3145;InbreedingCoeff=0.9118;MQ=82.75;MQ0=4;MQRankSum=-7.784;QD=46.14;ReadPosRankSum=1.723;VQSLOD=3.9460;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:26:42.37:796,42,0	1/1:3,0:5:9.03:394,9,0	0/0:26,0:18:44.24:0,44,673	0/0:43,0:26:64.55:0,65,1076	1/1:13,0:13:5.98:93,6,0	1/1:9,0:9:21.07:497,21,0	1/1:13,0:13:29.62:635,30,0	1/1:27,0:27:77.50:1427,77,0	1/1:14,2:16:36.11:968,36,0	1/1:15,0:15:45.12:1030,45,0	./.	0/0:15,0:15:42.13:0,42,1168	0/0:13,0:13:39.13:0,39,914	1/1:13,1:14:33.11:906,33,0	1/1:20,2:22:48.15:1566,48,0	1/1:12,0:12:12.03:183,12,0	1/1:27,0:28:59.66:1172,60,0	1/1:13,0:13:39.09:795,39,0	1/1:13,0:13:36.09:629,36,0	./.	1/1:15,0:15:5.99:49,6,0	0/0:9,0:9:24.03:0,24,450	0/0:10,0:10:17.87:0,18,385	0/0:16,0:16:48.15:0,48,1208	1/1:9,0:9:3:26,3,0	1/1:12,1:12:36.11:860,36,0	1/1:11,0:13:32.05:532,32,0	1/1:18,0:18:51.12:1006,51,0
chr10	54317677	.	CGCTCGT	C	12056.17	PASS	AC=38;AF=0.731;AN=52;BaseQRankSum=1.491;DP=439;FS=0.000;HRun=0;HaplotypeScore=109.5349;InbreedingCoeff=0.9118;MQ=80.26;MQ0=5;MQRankSum=-7.031;QD=41.43;ReadPosRankSum=1.517;VQSLOD=4.3789;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:25,1:26:44.40:801,44,0	1/1:5,0:5:9.03:180,9,0	0/0:24,0:16:44.20:0,44,682	0/0:42,0:25:64.52:0,65,1075	1/1:1,12:13:5.98:73,6,0	1/1:9,0:9:21.07:450,21,0	1/1:13,0:13:30.02:644,30,0	1/1:0,27:27:79.06:1431,79,0	1/1:16,0:16:36.11:756,36,0	1/1:14,1:15:45.12:957,45,0	./.	0/0:15,0:15:42.13:0,42,855	0/0:14,0:14:39.13:0,39,770	1/1:14,0:14:33.11:718,33,0	1/1:19,1:20:48.15:916,48,0	1/1:12,0:12:12.03:187,12,0	1/1:27,1:28:59.76:1166,60,0	1/1:13,0:13:39.09:733,39,0	1/1:1,12:12:36.09:629,36,0	./.	1/1:14,0:14:5.99:49,6,0	0/0:9,0:9:24.03:0,24,450	0/0:11,0:11:17.67:0,18,385	0/0:16,0:16:48.15:0,48,973	1/1:9,0:9:3:26,3,0	1/1:13,0:12:36.11:741,36,0	1/1:13,0:13:33.03:592,33,0	1/1:18,0:18:51.12:1006,51,0
chr10	54317681	.	CGT	C	7160.95	PASS	AC=34;AF=0.708;AN=48;BaseQRankSum=8.791;DP=413;FS=0.000;HRun=0;HaplotypeScore=95.5493;InbreedingCoeff=0.9385;MQ=73.79;MQ0=8;MQRankSum=-6.432;QD=28.76;ReadPosRankSum=1.924;VQSLOD=6.4371;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,12:22:35.44:442,35,0	1/1:3,2:5:8.89:95,9,0	0/0:20,0:12:29.76:0,30,352	0/0:37,0:20:17.51:0,18,649	1/1:12,1:13:3.01:36,3,0	1/1:5,4:9:21.06:294,21,0	1/1:8,6:14:29.74:415,30,0	1/1:27,0:27:64.08:852,64,0	1/1:10,2:12:33.11:463,33,0	1/1:10,3:13:39.13:567,39,0	./.	0/0:16,0:16:38.94:0,39,534	0/0:16,0:16:40.38:0,40,527	1/1:8,6:14:33.10:454,33,0	1/1:8,9:17:44.87:543,45,0	1/1:1,11:11:9.03:109,9,0	1/1:17,7:24:53.76:716,54,0	1/1:7,5:12:33.11:454,33,0	1/1:13,0:12:29.92:351,30,0	./.	./.	0/0:9,0:9:18.06:0,18,277	0/0:11,0:11:18.05:0,18,251	0/0:19,0:19:45.12:0,45,640	./.	1/1:9,2:10:30.09:400,30,0	1/1:6,5:11:26.95:345,27,0	1/1:16,4:18:45.15:624,45,0
chr10	54317774	.	G	GT	16450.07	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=-11.711;DP=598;FS=14.007;HRun=3;HaplotypeScore=61.6391;InbreedingCoeff=0.9982;MQ=86.70;MQ0=0;MQRankSum=-6.836;QD=37.47;ReadPosRankSum=3.371;VQSLOD=4.0130;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,31:32:90.30:1257,90,0	1/1:1,7:8:21.07:294,21,0	0/0:29,0:27:72.20:0,72,838	0/0:31,0:27:62.81:0,63,714	1/1:0,17:17:48.16:664,48,0	1/1:0,23:23:66.22:923,66,0	1/1:1,19:20:51.17:714,51,0	1/1:1,25:26:75.22:1016,75,0	1/1:0,18:18:54.18:756,54,0	1/1:2,34:36:99:1333,99,0	1/1:3,11:14:33.04:438,33,0	0/0:18,0:18:48.15:0,48,575	0/0:19,0:19:54.14:0,54,633	1/1:0,17:18:45.15:630,45,0	1/1:2,23:25:69.23:966,69,0	1/1:0,21:21:63.21:882,63,0	1/1:3,31:34:87.29:1217,87,0	1/1:1,20:21:26.40:756,26,0	1/1:1,16:17:48.15:655,48,0	1/1:0,13:13:39.13:546,39,0	1/1:0,21:21:57.15:776,57,0	0/0:24,0:24:72.22:0,72,863	0/0:16,0:16:48.09:0,48,548	0/0:22,0:22:66.16:0,66,775	1/1:1,20:21:54.18:756,54,0	1/1:2,20:22:60.19:824,60,0	1/1:1,19:21:54.18:751,54,0	1/1:0,11:11:21.07:294,21,0
chr10	54318285	.	G	GA	22531.01	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=1.933;DP=701;FS=7.770;HRun=0;HaplotypeScore=153.7112;InbreedingCoeff=0.9983;MQ=84.00;MQ0=0;MQRankSum=-12.497;QD=44.09;ReadPosRankSum=1.959;VQSLOD=3.3210;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,28:30:75.26:1196,75,0	1/1:1,6:7:18.06:287,18,0	0/0:29,0:29:83.86:0,84,1107	0/0:30,0:30:89.50:0,90,1194	1/1:3,19:22:40.69:747,41,0	1/1:2,25:27:78.27:1234,78,0	1/1:1,30:31:84.15:1279,84,0	1/1:3,21:24:69.23:1089,69,0	1/1:3,32:34:99:1581,99,0	1/1:0,22:22:63.21:1006,63,0	1/1:0,13:13:36.12:572,36,0	0/0:33,0:33:99:0,99,1354	0/0:21,0:21:63.21:0,63,881	1/1:1,26:27:78.27:1243,78,0	1/1:2,37:39:99:1806,114,0	1/1:3,24:27:81.28:1292,81,0	1/1:2,19:21:54.18:861,54,0	1/1:2,15:17:51.17:815,51,0	1/1:2,18:20:60.20:951,60,0	1/1:1,23:24:69.24:1100,69,0	1/1:2,34:36:79.81:1374,80,0	0/0:26,0:26:78.22:0,78,1039	0/0:18,0:18:54.18:0,54,749	0/0:33,0:33:96.31:0,96,1326	1/1:1,25:26:75.26:1190,75,0	1/1:1,30:31:87.30:1395,87,0	1/1:3,20:23:69.23:1081,69,0	1/1:0,9:9:27.09:431,27,0
chr10	54318314	.	C	CACTT	30481.16	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=15.340;DP=681;FS=1.051;HRun=0;HaplotypeScore=183.1343;InbreedingCoeff=0.9802;MQ=80.67;MQ0=0;MQRankSum=-16.989;QD=61.83;ReadPosRankSum=-1.762;VQSLOD=5.3282;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,24:34:78.01:1556,78,0	1/1:0,6:7:21.07:556,21,0	0/0:27,0:27:72.18:0,72,1224	0/0:25,0:25:61.09:0,61,1015	1/1:1,16:19:39.13:950,39,0	1/1:7,19:29:66.21:1629,66,0	1/1:8,17:25:63.17:1412,63,0	1/1:16,18:34:93.32:2273,93,0	1/1:12,21:33:84.22:1973,84,0	1/1:7,15:22:57.19:1409,57,0	1/1:1,13:14:36.04:836,36,0	0/0:28,0:28:81.28:0,81,1511	0/0:22,0:22:63.22:0,63,1162	1/1:4,20:24:66.11:1533,66,0	1/1:3,35:38:99:2778,108,0	1/1:6,21:27:75.22:1858,75,0	1/1:7,22:29:69.23:1681,69,0	1/1:3,9:12:30.10:764,30,0	1/1:8,13:21:57.20:1473,57,0	1/1:5,15:20:54.14:1265,54,0	1/1:11,19:30:66.05:1333,66,0	0/0:30,0:30:87.28:0,87,1580	0/0:23,0:23:66.22:0,66,1208	0/0:33,0:33:84.25:0,84,1504	1/1:0,23:23:69.19:1776,69,0	1/1:9,18:27:69.24:1730,69,0	1/1:2,18:20:60.21:1597,60,0	1/1:3,1:4:5.99:101,6,0
chr10	54321105	.	TCG	T	990.76	PASS	AB=0.982;AC=27;AF=0.482;AN=56;BaseQRankSum=2.871;DP=389;FS=4.500;HRun=0;HaplotypeScore=92.2983;InbreedingCoeff=-0.0293;MQ=41.40;MQ0=29;MQRankSum=-3.764;QD=3.34;ReadPosRankSum=1.259;VQSLOD=1.9915;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:17:7.88:128,8,0	0/0:5,0:4:0.47:0,0,1	0/0:14,0:2:5.85:0,6,34	0/0:22,0:6:3.77:0,4,48	0/1:5,1:6:4.98:17,0,5	0/1:18,1:17:4.92:36,0,5	0/1:23,0:22:7.93:12,0,8	1/1:22,0:16:17.61:246,18,0	1/1:5,0:5:0.45:1,0,0	0/1:15,0:14:9.78:100,0,10	0/1:10,0:9:4:21,0,4	0/0:13,0:13:21.13:0,21,218	0/1:13,0:13:5.16:5,0,188	0/0:7,0:6:1:0,1,3	0/0:13,1:13:3.13:0,3,14	0/1:8,0:7:5.53:21,0,6	0/1:14,0:13:8.84:32,0,9	0/1:8,0:6:6.15:6,0,27	1/1:16,0:10:22.86:146,23,0	0/1:8,0:7:16.35:17,0,16	0/1:8,0:4:0:0,0,0	0/1:26,0:25:3.83:4,0,340	0/0:17,0:17:3.45:0,3,195	0/1:31,0:27:71.95:72,0,156	0/1:10,1:10:6.18:16,0,6	1/1:15,0:15:1.36:148,1,0	0/1:10,0:9:1.29:51,0,1	1/1:10,0:8:8.83:56,9,0
chr10	54321132	.	C	CGGTT	7512.51	PASS	AB=0.689;AC=35;AF=0.625;AN=56;BaseQRankSum=1.507;DP=488;FS=58.024;HRun=0;HaplotypeScore=115.8341;InbreedingCoeff=0.4580;MQ=50.98;MQ0=11;MQRankSum=-6.859;QD=22.63;ReadPosRankSum=-6.054;VQSLOD=1.9468;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,13:25:23.91:239,24,0	1/1:3,7:10:5.57:31,6,0	0/0:25,0:11:33.03:0,33,544	0/0:35,0:19:44.64:0,45,758	1/1:2,14:16:29.74:285,30,0	1/1:13,9:20:41.38:570,41,0	1/1:16,12:27:59.62:815,60,0	0/1:14,16:26:82.98:928,0,83	1/1:0,11:11:11.86:79,12,0	1/1:4,16:25:18.01:1102,18,0	1/1:4,13:17:38.72:336,39,0	0/0:13,0:13:36.11:0,36,669	0/0:15,0:15:45.14:0,45,880	1/1:3,3:5:5.93:40,6,0	1/1:3,12:15:20.83:227,21,0	1/1:1,8:11:11.85:112,12,0	0/1:7,10:17:1.86:338,0,2	0/1:3,2:5:29.34:161,0,29	0/1:9,2:9:38.72:209,0,39	0/1:5,6:11:5.06:125,0,5	1/1:1,5:5:6.45:62,6,0	0/0:22,0:21:54.16:0,54,1046	0/0:15,0:15:30.10:0,30,625	0/0:30,0:27:60.21:0,60,1215	1/1:3,15:19:23.82:198,24,0	0/1:9,16:26:68.30:1063,0,68	1/1:3,7:10:27.01:518,27,0	0/1:4,2:6:40.54:73,0,41
chr10	54321194	.	A	AT	934.85	PASS	AC=6;AF=0.111;AN=54;BaseQRankSum=8.500;DP=503;FS=3.586;HRun=1;HaplotypeScore=81.2513;InbreedingCoeff=0.9563;MQ=86.01;MQ0=1;MQRankSum=-8.250;QD=23.97;ReadPosRankSum=2.071;VQSLOD=3.8243;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:48.07:0,48,584	0/0:10,0:10:24.08:0,24,310	0/0:19,0:19:56.08:0,56,622	0/0:21,0:21:45.09:0,45,526	0/0:18,0:18:42.09:0,42,524	0/0:18,0:18:51.17:0,51,661	0/0:20,0:19:47.99:0,48,538	0/0:28,0:28:81.21:0,81,1007	0/0:19,0:19:36.07:0,36,441	0/0:32,0:32:93.30:0,93,1194	0/0:16,0:16:45.10:0,45,564	0/0:19,0:19:57.19:0,57,739	0/0:18,0:18:54.16:0,54,684	0/0:14,0:14:33.11:0,33,427	0/0:14,0:14:27.09:0,27,350	0/0:17,0:17:38.92:0,39,442	0/0:19,0:19:36.09:0,36,448	0/0:13,0:13:36.06:0,36,432	1/1:4,5:8:15:170,15,0	1/1:15,0:15:36.12:464,36,0	./.	0/0:23,0:22:66.13:0,66,819	0/0:22,0:22:66.17:0,66,826	0/0:26,0:26:75.16:0,75,950	0/0:19,0:19:36.10:0,36,453	0/0:29,0:29:87.23:0,87,1097	1/1:13,2:15:36.05:441,36,0	0/0:4,0:4:6.02:0,6,78
chr10	54321195	.	T	TTC	1248.80	PASS	AC=6;AF=0.111;AN=54;BaseQRankSum=7.461;DP=498;FS=3.584;HRun=0;HaplotypeScore=87.4246;InbreedingCoeff=0.9722;MQ=85.74;MQ0=1;MQRankSum=-8.031;QD=35.68;ReadPosRankSum=2.081;VQSLOD=6.1161;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:48.12:0,48,744	0/0:10,0:10:24.08:0,24,391	0/0:19,0:19:57.14:0,57,819	0/0:20,0:20:45.12:0,45,687	0/0:18,0:18:42.14:0,42,672	0/0:18,0:18:51.17:0,51,832	0/0:20,0:19:51.16:0,51,774	0/0:27,0:27:81.23:0,81,1289	0/0:19,0:19:36.12:0,36,574	0/0:32,0:32:93.32:0,93,1516	0/0:17,0:17:45.15:0,45,724	0/0:19,0:19:57.19:0,57,930	0/0:18,0:18:54.18:0,54,874	0/0:13,0:13:36.11:0,36,561	0/0:14,0:14:27.09:0,27,440	0/0:17,0:17:39.13:0,39,614	0/0:18,0:18:36.12:0,36,580	0/0:13,0:13:39.10:0,39,593	1/1:6,2:8:15.05:234,15,0	1/1:2,12:14:36.12:592,36,0	./.	0/0:24,0:23:66.22:0,66,1061	0/0:23,0:23:66.19:0,66,1049	0/0:26,0:26:75.26:0,75,1210	0/0:19,0:19:36.12:0,36,587	0/0:29,0:29:87.30:0,87,1410	1/1:3,10:13:36.12:562,36,0	0/0:4,0:4:9:0,9,119
chr10	54321199	.	A	ATCAACAAT	3396.06	PASS	AC=6;AF=0.111;AN=54;BaseQRankSum=8.925;DP=499;FS=6.208;HRun=0;HaplotypeScore=137.5979;InbreedingCoeff=0.9865;MQ=85.17;MQ0=0;MQRankSum=-8.361;QD=91.79;ReadPosRankSum=2.588;VQSLOD=4.4903;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:48.12:0,48,1319	0/0:10,0:10:24.08:0,24,725	0/0:20,0:20:57.18:0,57,1535	0/0:18,0:18:51.02:0,51,1282	0/0:18,0:18:42.14:0,42,1190	0/0:20,0:20:54.14:0,54,1538	0/0:19,0:19:51.11:0,51,1266	0/0:24,0:24:72.25:0,72,2140	0/0:19,0:19:36.11:0,36,1026	0/0:33,0:33:96.32:0,96,2796	0/0:17,0:17:48.15:0,48,1326	0/0:19,0:19:57.20:0,57,1726	0/0:19,0:19:54.18:0,54,1571	0/0:13,0:13:36.12:0,36,1071	0/0:13,0:13:27.09:0,27,792	0/0:18,0:18:41.86:0,42,1048	0/0:19,0:19:39.09:0,39,1087	0/0:13,0:13:39.13:0,39,1107	1/1:7,2:8:12.93:464,13,0	1/1:3,12:15:36.12:1499,36,0	./.	0/0:23,0:23:69.19:0,69,1969	0/0:25,0:25:72.22:0,72,1977	0/0:24,0:24:72.25:0,72,2180	0/0:19,0:19:36.12:0,36,1082	0/0:28,0:28:84.29:0,84,2536	1/1:3,10:13:36.12:1433,36,0	0/0:6,0:6:18.04:0,18,353
chr10	54321203	.	G	GTT	1944.78	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=10.401;DP=521;FS=0.000;HRun=0;HaplotypeScore=93.6677;InbreedingCoeff=0.9640;MQ=86.05;MQ0=0;MQRankSum=-9.659;QD=40.52;ReadPosRankSum=0.942;VQSLOD=5.4041;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:48.16:0,48,765	0/0:10,0:10:24.05:0,24,363	0/0:21,0:21:63.19:0,63,984	0/0:20,0:20:57.19:0,57,868	0/0:18,0:18:36.12:0,36,586	0/0:22,0:22:57.19:0,57,916	0/0:18,0:18:45.15:0,45,734	0/0:24,0:24:72.25:0,72,1159	0/0:20,0:20:39.13:0,39,636	0/0:34,0:34:96.33:0,96,1565	0/0:17,0:17:51.17:0,51,831	0/0:19,0:19:57.19:0,57,917	0/0:19,0:19:57.19:0,57,928	0/0:13,0:13:36.12:0,36,586	0/0:12,0:12:24.08:0,24,392	0/0:16,0:16:36.12:0,36,584	0/0:21,0:21:42.14:0,42,685	0/0:14,0:14:39.13:0,39,636	1/1:6,2:7:18.06:316,18,0	1/1:10,12:22:63.17:1074,63,0	1/1:5,0:5:5.98:55,6,0	0/0:22,0:22:66.21:0,66,1048	0/0:26,0:26:75.26:0,75,1222	0/0:24,0:24:72.25:0,72,1175	0/0:20,0:20:39.12:0,39,613	0/0:29,0:29:84.27:0,84,1347	1/1:3,10:13:39.13:652,39,0	0/0:6,0:6:18.06:0,18,294
chr10	54321813	.	T	TA	16018.41	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=-12.003;DP=571;FS=0.392;HRun=2;HaplotypeScore=49.2293;InbreedingCoeff=0.9970;MQ=72.66;MQ0=0;MQRankSum=-2.091;QD=35.36;ReadPosRankSum=1.811;VQSLOD=4.9717;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,37:38:99:1464,102,0	1/1:2,14:16:36.12:516,36,0	0/0:8,0:8:16.26:0,16,161	0/0:10,0:10:20.92:0,21,211	1/1:1,17:18:50.99:658,51,0	1/1:0,16:16:45.15:646,45,0	1/1:1,26:27:45.15:646,45,0	1/1:1,22:23:63.12:779,63,0	1/1:2,23:25:63.21:905,63,0	1/1:1,19:20:54.06:710,54,0	1/1:1,13:14:39.06:534,39,0	0/0:19,0:19:57.14:0,57,668	0/0:19,0:19:57.13:0,57,654	1/1:1,19:20:51.17:731,51,0	1/1:0,16:16:39.13:561,39,0	1/1:1,20:21:51.17:733,51,0	1/1:2,18:20:51.64:733,52,0	1/1:4,20:24:54.07:748,54,0	1/1:3,23:26:69.13:893,69,0	1/1:0,24:24:66.22:946,66,0	1/1:0,19:19:48.16:681,48,0	0/0:22,0:22:63.13:0,63,729	0/0:24,0:24:66.19:0,66,802	0/0:16,0:16:48.13:0,48,579	1/1:1,21:22:51.17:733,51,0	1/1:1,28:29:84.21:1111,84,0	1/1:0,18:18:39.13:561,39,0	1/1:0,17:17:51.17:731,51,0
chr10	54323426	.	CAAA	C	17931.56	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=12.575;DP=687;FS=5.237;HRun=6;HaplotypeScore=101.8303;InbreedingCoeff=0.9976;MQ=61.53;MQ0=4;MQRankSum=-4.621;QD=35.30;ReadPosRankSum=2.930;VQSLOD=3.2537;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,36:40:76.88:1239,77,0	1/1:0,9:9:21.07:330,21,0	0/0:29,0:22:53.65:0,54,872	0/0:27,0:23:54.16:0,54,878	1/1:2,27:28:72.10:1043,72,0	1/1:1,15:16:39.13:622,39,0	1/1:2,20:22:30.10:479,30,0	1/1:2,28:30:78.69:1183,79,0	1/1:2,29:31:72.24:1148,72,0	1/1:0,27:27:78.27:1232,78,0	1/1:0,20:20:55.34:803,55,0	0/0:30,0:30:84.27:0,84,1795	0/0:25,0:25:75.23:0,75,1574	1/1:0,23:23:45.15:718,45,0	1/1:2,28:30:66.22:1049,66,0	1/1:0,15:15:33.11:527,33,0	1/1:2,37:39:72.24:1146,72,0	1/1:0,22:22:39.01:558,39,0	1/1:1,17:18:51.09:688,51,0	1/1:0,20:20:60.08:867,60,0	1/1:0,21:21:48.16:767,48,0	0/0:20,0:20:60.19:0,60,1186	0/0:16,0:16:48.13:0,48,980	0/0:31,0:31:90.31:0,90,1881	1/1:2,25:27:54.18:848,54,0	1/1:1,24:25:72.23:1110,72,0	1/1:1,35:36:81.17:1288,81,0	1/1:0,7:7:18.06:287,18,0
chr10	54324199	.	CGTGTGTGTGTGTGTGTGTGTGT	C	1921.07	PASS	AB=0.844;AC=7;AF=0.135;AN=52;BaseQRankSum=5.825;DP=590;FS=1.141;HRun=0;HaplotypeScore=295.0727;InbreedingCoeff=0.5523;MQ=71.37;MQ0=11;MQRankSum=-5.146;QD=24.32;ReadPosRankSum=-0.489;VQSLOD=2.1679;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:31,7:37:99:1040,0,222	1/1:6,1:7:3.01:173,3,0	./.	0/0:41,0:29:4.57:0,5,76	0/0:11,0:10:6.96:0,7,426	0/0:14,0:14:27.09:0,27,1980	0/0:25,0:25:23.56:0,24,1132	0/0:18,0:17:8.39:0,8,155	0/0:23,0:23:32.14:0,32,1787	0/0:21,0:21:28.64:0,29,1534	0/0:8,0:8:11.07:0,11,681	0/0:23,0:28:37.01:0,37,2351	0/0:20,0:21:32.75:0,33,1871	0/0:23,0:23:28.97:0,29,1153	0/0:19,0:19:32.98:0,33,2201	1/1:16,3:19:9.03:520,9,0	1/1:13,2:15:6.02:311,6,0	./.	0/0:19,0:18:20.43:0,20,1193	0/0:10,0:8:6.02:0,6,515	0/0:46,0:45:18.32:0,18,808	0/0:10,0:10:3.01:0,3,202	0/0:7,0:9:12.04:0,12,960	0/0:21,0:23:21.07:0,21,1251	0/0:29,0:29:34.33:0,34,2145	0/0:23,0:23:24.08:0,24,1779	0/0:27,0:27:24.70:0,25,676	0/0:18,0:17:33.08:0,33,1783
chr10	54324248	.	G	GAC	3605.18	PASS	AB=0.971;AC=22;AF=0.393;AN=56;BaseQRankSum=10.695;DP=552;FS=26.640;HRun=0;HaplotypeScore=115.2365;InbreedingCoeff=0.1646;MQ=54.95;MQ0=24;MQRankSum=-4.550;QD=11.98;ReadPosRankSum=2.800;VQSLOD=1.7560;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:34,1:34:0.34:471,0,0	1/1:6,0:6:5.97:55,6,0	0/0:37,0:12:30.10:0,30,435	0/0:40,0:18:42:0,42,597	0/0:14,0:13:2.76:0,3,46	0/1:12,0:12:99:117,0,170	0/1:31,0:30:35.73:563,0,36	1/1:21,0:16:23.14:492,23,0	1/1:7,13:20:5.84:83,6,0	0/1:18,0:18:32.65:289,0,33	0/0:9,0:9:2.99:0,3,24	0/0:28,0:29:64.05:0,64,865	0/0:16,0:15:42.08:0,42,549	0/1:18,0:18:20.53:236,0,21	0/0:21,0:20:14.09:0,14,244	1/1:16,0:16:17.94:208,18,0	1/1:17,0:16:30.06:403,30,0	1/1:2,12:14:2.04:35,2,0	0/1:14,0:14:74.45:165,0,74	0/0:11,0:10:2.96:0,3,19	0/1:40,0:37:1.02:1,0,19	0/0:17,0:16:39.10:0,39,524	0/0:9,0:9:18.03:0,18,229	0/0:26,0:25:69.16:0,69,962	0/0:22,0:21:3.01:0,3,291	0/1:18,0:18:99:339,0,181	0/1:9,5:14:21.05:67,0,21	0/1:7,0:6:79.49:79,0,120
chr10	54324250	.	G	GAC	1963.14	PASS	AB=0.983;AC=22;AF=0.393;AN=56;BaseQRankSum=9.665;DP=537;FS=34.342;HRun=0;HaplotypeScore=120.9445;InbreedingCoeff=-0.0236;MQ=57.50;MQ0=22;MQRankSum=-3.400;QD=6.12;ReadPosRankSum=0.717;VQSLOD=1.1051;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:36,0:35:30.44:228,0,30	0/1:6,0:6:4.89:5,0,15	0/0:38,0:13:24.12:0,24,483	0/0:41,0:19:48.03:0,48,694	0/0:11,2:13:2.76:0,3,42	0/1:11,0:12:81.73:82,0,126	0/1:28,2:30:14.44:368,0,14	1/1:21,0:16:35.78:238,36,0	1/1:15,3:18:5.46:60,5,0	0/1:15,0:15:20.71:190,0,21	0/1:7,1:8:0:0,0,0	0/0:28,0:28:55.05:0,55,771	0/0:17,0:16:22.09:0,22,507	0/1:15,1:16:19.76:121,0,20	0/0:19,0:18:8.09:0,8,172	0/1:16,0:16:9.09:99,0,9	1/1:16,1:16:18.90:211,19,0	1/1:15,1:16:2.76:12,3,0	0/1:14,0:14:65.98:124,0,66	0/0:9,0:8:2.96:0,3,19	0/1:39,0:36:1.02:1,0,19	0/0:16,0:15:39.11:0,39,533	0/0:8,0:8:18.04:0,18,226	0/0:27,0:26:72.21:0,72,1033	0/1:20,0:19:3.34:3,0,201	0/1:18,0:18:99:267,0,114	0/1:13,0:13:20.06:54,0,20	0/1:6,0:5:63.62:64,0,81
chr10	54324252	.	G	GACTGAC	9365.85	PASS	AB=0.874;AC=31;AF=0.554;AN=56;BaseQRankSum=0.085;DP=551;FS=1.543;HRun=0;HaplotypeScore=140.1912;InbreedingCoeff=0.6422;MQ=59.47;MQ0=17;MQRankSum=-6.037;QD=31.86;ReadPosRankSum=0.328;VQSLOD=4.2892;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:37,0:37:47.17:1065,47,0	1/1:6,0:6:9.01:130,9,0	0/0:38,0:13:36.10:0,36,804	0/0:43,0:21:42.62:0,43,1056	1/1:4,0:14:3.21:13,3,0	0/1:12,0:12:48.47:285,0,48	1/1:28,0:30:47.61:1299,48,0	1/1:24,0:20:53.63:1330,54,0	1/1:17,0:20:15.01:260,15,0	1/1:5,12:18:33.07:798,33,0	1/1:2,0:8:2.97:20,3,0	0/0:26,0:26:56.75:0,57,1316	0/0:14,0:14:39.13:0,39,886	1/1:15,2:18:18.05:493,18,0	0/0:9,8:18:5.53:0,6,83	1/1:16,0:16:18.04:382,18,0	1/1:18,0:18:39.13:958,39,0	1/1:16,0:17:8.57:131,9,0	1/1:9,5:17:15.49:656,15,0	0/0:9,0:8:1.55:0,2,4	0/0:11,27:41:1.81:0,2,5	0/0:14,0:14:42.14:0,42,988	0/0:7,0:7:15.05:0,15,330	0/0:27,0:26:75.26:0,75,1749	0/0:7,10:18:9.02:0,9,109	1/1:18,0:18:41.13:1219,41,0	0/1:9,4:13:10.57:101,0,11	0/1:5,1:5:29.35:226,0,29
chr10	54328382	.	TCA	T	6843.69	PASS	AB=0.933;AC=19;AF=0.339;AN=56;BaseQRankSum=13.731;DP=777;FS=4.250;HRun=0;HaplotypeScore=99.1792;InbreedingCoeff=0.9397;MQ=77.42;MQ0=1;MQRankSum=-0.698;QD=24.18;ReadPosRankSum=3.134;VQSLOD=5.6087;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,38:42:90.28:1100,90,0	1/1:2,10:12:21.07:257,21,0	0/0:42,1:34:11.97:0,12,588	0/0:33,1:34:22.11:0,22,832	0/0:23,0:23:48.16:0,48,768	0/0:25,0:25:66.23:0,66,1068	0/0:33,0:33:72.22:0,72,1132	0/0:30,0:30:57.15:0,57,825	0/0:25,0:25:72.25:0,72,1166	0/0:29,1:30:38.57:0,39,1122	0/1:13,1:14:0.55:1,0,498	0/0:33,0:33:84.27:0,84,1316	0/0:38,0:38:99:0,108,1747	0/0:25,2:28:21.40:0,21,994	0/0:22,0:22:51.17:0,51,827	1/1:2,29:31:75.24:917,75,0	1/1:5,29:34:72.23:880,72,0	1/1:3,23:26:63.20:770,63,0	1/1:13,15:28:45.10:532,45,0	1/1:2,22:24:57.12:680,57,0	1/1:10,37:49:92.40:1113,92,0	0/0:26,0:26:18.49:0,18,789	0/0:16,0:16:33.11:0,33,535	0/0:38,1:39:71.67:0,72,1620	0/0:15,0:15:33.11:0,33,535	0/0:21,1:22:8.47:0,8,637	1/1:2,20:23:50.86:595,51,0	0/0:12,0:12:36.12:0,36,584
chr10	54329697	.	T	TA	9031.95	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=-3.344;DP=573;FS=0.862;HRun=10;HaplotypeScore=76.9119;InbreedingCoeff=0.9681;MQ=78.21;MQ0=0;MQRankSum=-3.434;QD=20.53;ReadPosRankSum=1.308;VQSLOD=5.7462;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,0:16:26.68:139,27,0	1/1:5,0:13:18.93:94,19,0	0/0:21,0:21:10.45:0,10,243	0/0:17,0:17:32.83:0,33,262	1/1:7,25:33:74.89:738,75,0	1/1:10,24:34:66.17:704,66,0	1/1:4,16:20:45.07:468,45,0	1/1:9,27:36:40.91:832,41,0	1/1:2,20:22:60.13:630,60,0	1/1:7,31:40:52.79:949,53,0	1/1:2,11:13:30.08:320,30,0	0/0:16,0:16:35.93:0,36,293	0/0:19,0:20:49.96:0,50,400	1/1:1,17:19:41.94:430,42,0	1/1:5,20:25:48.12:512,48,0	1/1:5,2:16:27.87:151,28,0	1/1:4,2:19:19.92:100,20,0	1/1:5,0:13:18.03:91,18,0	1/1:5,14:19:20.46:415,20,0	1/1:2,23:25:63.12:659,63,0	1/1:1,16:17:33.08:352,33,0	0/0:26,0:27:67.95:0,68,548	0/0:18,0:18:32.92:0,33,271	0/0:14,0:14:38.95:0,39,320	1/1:2,17:19:45.11:480,45,0	1/1:4,20:24:35.50:583,36,0	1/1:3,10:13:30.08:320,30,0	1/1:2,2:4:6.02:64,6,0
chr10	54330272	.	GTGTA	G	8443.29	PASS	AB=0.967;AC=33;AF=0.611;AN=54;BaseQRankSum=12.231;DP=761;FS=2.399;HRun=0;HaplotypeScore=161.9124;InbreedingCoeff=0.8658;MQ=57.79;MQ0=5;MQRankSum=0.251;QD=17.52;ReadPosRankSum=-0.974;VQSLOD=4.7263;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:48.16:0,48,1079	0/0:12,0:12:24.08:0,24,535	./.	0/0:25,0:16:0.47:0,0,1	1/1:14,8:23:18.02:246,18,0	1/1:12,17:30:36.59:546,37,0	1/1:15,14:29:36.12:560,36,0	1/1:28,8:36:21.05:272,21,0	1/1:18,13:32:36.59:552,37,0	1/1:16,24:40:78.25:1181,78,0	1/1:17,10:28:27.09:419,27,0	0/1:28,1:29:4.57:5,0,834	0/0:20,0:20:18.06:0,18,424	1/1:15,17:32:45.15:692,45,0	1/1:9,9:18:27.09:420,27,0	0/0:30,0:31:65.96:0,66,1537	0/0:31,0:31:48.12:0,48,973	0/0:29,0:29:7.47:0,7,1063	1/1:15,8:22:24.02:320,24,0	1/1:15,12:26:36.11:539,36,0	1/1:17,16:33:38.86:607,39,0	0/0:28,1:29:13.48:0,13,1222	0/0:20,0:20:33.11:0,33,752	0/0:20,0:20:3.84:0,4,427	1/1:13,17:31:42.14:626,42,0	1/1:24,15:39:11.41:636,11,0	1/1:10,8:19:24.07:355,24,0	1/1:3,10:13:30.10:467,30,0
chr10	54330369	.	C	CT	4510.30	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-13.501;DP=665;FS=3.103;HRun=9;HaplotypeScore=96.1310;InbreedingCoeff=0.9857;MQ=73.97;MQ0=1;MQRankSum=-2.771;QD=23.61;ReadPosRankSum=0.999;VQSLOD=5.2024;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,26:34:60.14:653,60,0	1/1:2,6:8:18.05:199,18,0	0/0:39,0:30:56.53:0,57,460	0/0:29,0:23:32.68:0,33,271	0/0:32,0:32:77.97:0,78,677	0/0:25,0:25:59.98:0,60,521	0/0:17,0:17:41.94:0,42,357	0/0:38,0:38:92.95:0,93,803	0/0:30,0:30:77.97:0,78,677	0/0:35,0:35:74.87:0,75,641	0/0:26,0:26:65.96:0,66,570	0/0:23,0:23:53.97:0,54,465	0/0:17,1:19:13.84:0,14,337	0/0:18,0:19:44.03:0,44,371	0/0:15,0:16:47.03:0,47,397	1/1:3,16:19:25.29:505,25,0	1/1:5,26:32:66.01:711,66,0	1/1:4,9:13:27.07:299,27,0	1/1:6,20:27:40.72:636,41,0	1/1:4,28:32:81.15:870,81,0	1/1:4,3:7:9.02:100,9,0	0/0:22,0:22:56.98:0,57,495	0/0:18,0:18:41.98:0,42,364	0/0:16,0:16:47.99:0,48,417	0/0:25,0:25:59.87:0,60,512	0/0:31,0:31:83.95:0,84,727	1/1:1,18:19:28.09:538,28,0	0/0:12,0:12:33:0,33,288
chr10	54331986	.	C	CACAT	6852.42	PASS	AB=0.881;AC=35;AF=0.673;AN=52;BaseQRankSum=1.308;DP=793;FS=9.456;HRun=0;HaplotypeScore=202.5153;InbreedingCoeff=0.6409;MQ=53.44;MQ0=7;MQRankSum=-0.445;QD=11.83;ReadPosRankSum=1.086;VQSLOD=3.6673;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:12.94:0,13,72	1/1:9,0:9:0.02:16,0,0	./.	./.	1/1:28,0:28:38.95:546,39,0	1/1:23,0:22:24.08:329,24,0	0/1:26,0:25:25.74:75,0,26	1/1:42,0:41:11.98:135,12,0	1/1:39,0:37:44.18:677,44,0	1/1:30,0:38:57:674,57,0	1/1:30,0:29:35.78:509,36,0	0/1:17,20:38:34.62:52,0,35	0/0:39,0:39:75.19:0,75,1059	1/1:35,0:35:47.67:740,48,0	1/1:42,0:42:47.60:681,48,0	0/1:32,0:32:30.01:30,0,72	0/0:16,0:14:11.81:0,12,77	0/0:21,0:21:29.80:0,30,233	1/1:12,0:12:5.97:47,6,0	1/1:31,2:35:9.04:192,9,0	1/1:29,0:30:5.78:99,6,0	0/0:27,0:27:54.17:0,54,792	0/0:13,0:13:15.05:0,15,224	0/0:26,0:25:27.04:0,27,338	1/1:24,0:24:30.08:429,30,0	1/1:36,0:35:52.59:818,53,0	1/1:26,3:34:27.51:404,28,0	1/1:16,0:16:32.59:398,33,0
chr10	54332028	.	CAG	C	5787.12	PASS	AB=1.000;AC=41;AF=0.732;AN=56;BaseQRankSum=12.564;DP=759;FS=12.948;HRun=0;HaplotypeScore=228.7774;InbreedingCoeff=0.7979;MQ=47.66;MQ0=13;MQRankSum=-2.425;QD=10.05;ReadPosRankSum=2.019;VQSLOD=3.1693;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:25:22.63:114,23,0	1/1:13,0:12:9.94:42,10,0	0/0:12,0:3:8.90:0,9,105	0/0:9,0:4:6.02:0,6,89	1/1:21,10:32:46.07:368,46,0	1/1:12,7:19:43.99:369,44,0	1/1:8,10:18:20.01:210,20,0	1/1:19,23:38:66.15:753,66,0	1/1:16,11:30:25.02:354,25,0	1/1:19,19:42:76.03:853,76,0	1/1:14,14:29:34.57:373,35,0	0/0:36,0:35:39.13:0,39,635	0/0:45,0:45:99:0,105,1593	1/1:13,9:35:42.73:313,43,0	1/1:18,16:36:53.57:449,54,0	1/1:26,0:25:24.66:167,25,0	1/1:19,0:15:2.76:7,3,0	1/1:24,0:23:13.07:52,13,0	1/1:14,0:12:10.92:71,11,0	1/1:31,0:27:15.42:83,15,0	1/1:9,0:9:5.75:30,6,0	0/0:29,1:30:16.67:0,17,718	0/0:19,1:19:1.68:0,2,534	0/0:31,0:30:68.01:0,68,1034	1/1:11,12:25:28.03:264,28,0	1/1:22,18:36:73.99:685,74,0	0/1:40,0:38:3.40:73,0,3	1/1:9,2:12:26.54:156,27,0
chr10	54332035	.	AG	A	547.51	PASS	AB=0.901;AC=9;AF=0.161;AN=56;BaseQRankSum=8.464;DP=710;FS=3.233;HRun=1;HaplotypeScore=232.1918;InbreedingCoeff=0.1984;MQ=46.76;MQ0=13;MQRankSum=1.500;QD=3.40;ReadPosRankSum=1.986;VQSLOD=0.2326;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:27,1:26:12.42:135,0,12	0/1:9,4:12:7.85:51,0,8	0/0:11,0:3:9.03:0,9,142	0/0:8,0:4:6.02:0,6,96	0/0:30,0:29:33.94:0,34,295	0/0:23,0:21:28.64:0,29,232	0/0:26,0:23:8.55:0,9,66	0/0:38,0:35:67.80:0,68,475	0/0:32,0:29:38.64:0,39,423	0/0:37,0:34:54.92:0,55,276	0/0:28,0:27:27.99:0,28,254	0/0:41,0:39:48.09:0,48,738	0/0:41,0:41:99:0,117,1830	0/0:32,0:32:39.07:0,39,389	0/0:35,0:34:47.57:0,48,403	0/1:21,5:24:2.73:204,0,3	0/0:18,0:16:10.66:0,11,64	0/1:20,1:20:37.15:37,0,100	0/1:11,3:11:1.05:79,0,1	0/1:25,1:22:48.74:91,0,49	1/1:5,0:5:5.96:44,6,0	0/0:29,0:29:69.70:0,70,1044	0/0:19,0:17:40.02:0,40,611	0/0:31,0:30:75.04:0,75,1145	0/0:23,0:23:27.60:0,28,234	0/0:34,0:30:58.93:0,59,440	0/1:28,0:26:47.20:47,0,81	0/0:13,0:13:36.27:0,36,340
chr10	54332037	.	AGAG	A	1497.02	PASS	AB=0.952;AC=12;AF=0.214;AN=56;BaseQRankSum=8.959;DP=699;FS=6.353;HRun=0;HaplotypeScore=242.0066;InbreedingCoeff=0.3533;MQ=46.25;MQ0=13;MQRankSum=-0.847;QD=8.51;ReadPosRankSum=-0.837;VQSLOD=2.1861;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:26,1:25:33.84:276,0,34	1/1:9,4:12:21.79:171,22,0	0/0:11,0:3:9.03:0,9,191	0/0:8,0:4:6.02:0,6,130	0/0:31,0:30:47.95:0,48,449	0/0:23,0:21:45.17:0,45,387	0/0:27,0:24:19.37:0,19,133	0/0:39,0:36:98.68:0,99,745	0/0:32,0:29:60.05:0,60,542	0/0:36,0:32:83.94:0,84,469	0/0:26,0:25:40.54:0,41,271	0/0:40,0:38:50.95:0,51,1130	0/0:40,0:40:99:0,114,2702	0/0:30,0:30:48.83:0,49,467	0/0:34,0:33:62.10:0,62,561	1/1:21,5:24:18.44:394,18,0	0/1:18,0:16:8.03:96,0,8	0/1:19,1:19:14.96:140,0,15	0/1:12,3:12:14.35:160,0,14	0/1:23,1:20:28.89:194,0,29	1/1:5,0:5:9.34:82,9,0	0/0:26,0:26:65.79:0,66,1366	0/0:20,0:18:44.82:0,45,971	0/0:30,0:30:75.73:0,76,1744	0/0:21,0:21:33.80:0,34,294	0/0:36,0:30:81.64:0,82,629	0/1:28,0:26:71.60:148,0,72	0/0:13,0:13:38.64:0,39,430
chr10	54332040	.	GAGAA	G	4741.96	PASS	AB=1.000;AC=39;AF=0.696;AN=56;BaseQRankSum=10.102;DP=706;FS=7.171;HRun=0;HaplotypeScore=238.4706;InbreedingCoeff=0.6784;MQ=45.50;MQ0=15;MQRankSum=-2.311;QD=8.91;ReadPosRankSum=2.506;VQSLOD=2.8923;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:22:5.89:201,0,6	1/1:13,0:12:19.92:117,20,0	0/0:11,0:3:4.48:0,4,45	0/0:8,0:4:6:0,6,51	1/1:31,1:31:26.18:194,26,0	1/1:23,0:21:29.02:196,29,0	1/1:29,0:26:16.97:129,17,0	1/1:37,0:35:48.19:360,48,0	1/1:32,2:31:50.38:368,50,0	1/1:38,0:34:87.98:516,88,0	1/1:25,0:24:21.42:191,21,0	0/0:39,0:37:51.77:0,52,920	0/0:42,0:41:99:0,111,1656	1/1:29,1:30:33.05:262,33,0	1/1:33,0:32:46.39:269,46,0	1/1:27,0:25:7.56:274,8,0	1/1:20,0:18:19.57:201,20,0	1/1:22,0:21:54.22:347,54,0	0/1:15,0:12:17.36:128,0,17	1/1:25,0:21:16.83:155,17,0	1/1:5,0:5:3.99:49,4,0	0/0:23,0:23:24.46:0,24,710	0/0:21,0:19:47.95:0,48,812	0/0:30,0:30:64.67:0,65,1267	1/1:23,0:22:24.15:199,24,0	1/1:32,2:28:45.22:353,45,0	1/1:29,0:27:14.47:178,14,0	0/1:13,0:12:42.25:56,0,42
chr10	54332042	.	GAA	G	4496.26	PASS	AB=0.922;AC=39;AF=0.696;AN=56;BaseQRankSum=11.074;DP=701;FS=7.259;HRun=3;HaplotypeScore=221.0788;InbreedingCoeff=0.7146;MQ=45.35;MQ0=17;MQRankSum=-2.425;QD=8.52;ReadPosRankSum=2.509;VQSLOD=1.2313;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:22:0.13:170,0,0	1/1:13,0:12:19.94:104,20,0	0/0:11,0:3:4.48:0,4,45	0/0:8,0:4:6:0,6,51	1/1:26,7:32:26.39:204,26,0	1/1:20,3:21:31.94:249,32,0	1/1:28,0:25:16.37:110,16,0	1/1:36,0:34:51.18:366,51,0	1/1:30,2:29:43.81:275,44,0	1/1:38,0:34:86.68:467,87,0	1/1:22,2:23:19.65:145,20,0	0/0:38,0:36:51.80:0,52,801	0/0:41,0:40:98.15:0,98,1462	1/1:29,1:30:28.17:163,28,0	1/1:25,8:32:50.09:311,50,0	1/1:27,0:25:10.30:270,10,0	1/1:20,0:18:30.60:193,31,0	1/1:21,0:21:53.62:322,54,0	0/1:15,0:12:14.02:134,0,14	1/1:26,0:21:20.38:140,20,0	1/1:5,0:5:3.67:41,4,0	0/0:24,0:24:37.70:0,38,648	0/0:21,0:19:32.35:0,32,705	0/0:30,0:30:54.88:0,55,1086	1/1:20,3:22:23.28:163,23,0	1/1:32,1:27:56.12:295,56,0	1/1:29,0:27:21:202,21,0	0/1:9,4:12:10.50:173,0,11
chr10	54332044	.	AAG	A	3743.44	PASS	AB=0.981;AC=40;AF=0.769;AN=52;BaseQRankSum=10.415;DP=712;FS=7.590;HRun=0;HaplotypeScore=225.9712;InbreedingCoeff=0.7017;MQ=45.29;MQ0=17;MQRankSum=-2.474;QD=6.96;ReadPosRankSum=2.485;VQSLOD=2.4156;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:24,1:22:9.61:340,0,10	1/1:13,0:12:14.03:168,14,0	./.	./.	1/1:35,0:34:23.64:100,24,0	1/1:25,0:23:15.24:103,15,0	1/1:28,0:25:13.70:51,14,0	1/1:29,8:35:32.46:302,32,0	1/1:31,0:28:20.73:102,21,0	1/1:38,0:34:17.06:78,17,0	1/1:24,0:23:23.50:99,23,0	0/0:38,0:36:48:0,48,709	0/0:39,2:40:6.83:0,7,892	1/1:30,0:30:21.75:104,22,0	1/1:33,0:32:32.62:134,33,0	0/1:27,0:25:11.04:311,0,11	1/1:19,2:19:22.71:281,23,0	1/1:22,1:22:27.96:336,28,0	1/1:16,0:13:13.28:233,13,0	1/1:22,4:21:32.30:376,32,0	1/1:5,0:5:9.03:110,9,0	0/0:26,0:26:22.23:0,22,474	0/0:21,0:19:41.73:0,42,588	0/0:29,0:29:61.76:0,62,883	1/1:23,0:22:16.78:63,17,0	1/1:34,0:28:23.73:113,24,0	1/1:28,2:28:28.72:292,29,0	1/1:14,0:13:0.34:45,0,0
chr10	54332066	.	GAGAGAGAGA	G	5787.70	PASS	AB=1.000;AC=31;AF=0.596;AN=52;BaseQRankSum=5.223;DP=659;FS=0.742;HRun=0;HaplotypeScore=242.6773;InbreedingCoeff=0.2902;MQ=44.68;MQ0=32;MQRankSum=3.751;QD=12.13;ReadPosRankSum=3.494;VQSLOD=3.5876;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:23:23.43:23,0,194	0/1:13,0:11:3.14:3,0,109	./.	./.	1/1:22,8:28:44.63:514,45,0	1/1:25,0:21:38.95:465,39,0	1/1:23,0:19:25.99:279,26,0	0/0:33,0:30:6.74:0,7,168	1/1:27,1:23:63.03:903,63,0	1/1:28,0:21:31.66:476,32,0	1/1:24,0:23:44.72:508,45,0	0/0:33,0:31:60.21:0,60,1262	0/0:34,0:32:83.53:0,84,1424	1/1:27,0:25:27.30:153,27,0	1/1:29,1:23:56.98:701,57,0	0/1:27,0:24:83.77:84,0,205	0/0:20,0:18:17.06:0,17,240	0/1:19,0:19:19.46:19,0,181	0/1:17,0:13:11.20:11,0,144	0/1:27,0:22:7.17:7,0,249	1/1:6,0:5:2.08:13,2,0	0/1:25,0:25:26.67:27,0,961	0/0:28,0:26:63.68:0,64,1161	0/0:32,0:32:64.10:0,64,1077	1/1:18,2:18:41.51:587,42,0	1/1:36,0:25:56.33:737,56,0	0/1:30,0:28:60.01:60,0,313	0/1:15,0:13:22.71:217,0,23
chr10	54332067	.	AGAG	A	2025.64	PASS	AB=0.996;AC=16;AF=0.308;AN=52;BaseQRankSum=7.904;DP=655;FS=15.301;HRun=0;HaplotypeScore=197.7638;InbreedingCoeff=-0.1336;MQ=44.88;MQ0=31;MQRankSum=4.083;QD=6.23;ReadPosRankSum=5.025;VQSLOD=1.1741;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:23:69.07:168,0,69	0/1:13,0:11:18.83:125,0,19	./.	./.	0/0:30,0:28:0.54:0,1,97	0/1:25,0:21:5.23:5,0,127	0/0:22,0:18:3.58:0,4,77	0/0:34,0:31:74.73:0,75,559	0/0:28,0:23:0.65:0,1,186	0/0:28,0:21:7.49:0,7,221	0/1:22,0:21:30.31:30,0,122	0/0:33,0:31:59.80:0,60,1341	0/0:34,0:32:89.44:0,89,1821	1/1:12,14:25:13.57:567,14,0	0/1:30,0:23:3.43:3,0,120	0/1:27,0:24:81.28:283,0,81	0/1:19,1:18:34.74:154,0,35	0/1:20,0:19:83.85:141,0,84	0/1:16,0:13:44.79:99,0,45	0/1:26,0:21:9.32:239,0,9	1/1:6,0:5:2.80:19,3,0	0/0:25,0:25:48.53:0,49,1089	0/0:28,0:26:66.22:0,66,1290	0/0:32,0:32:79.14:0,79,1650	0/0:20,0:18:7.59:0,8,159	0/1:39,0:27:34.04:34,0,219	0/1:28,0:26:3.83:306,0,4	0/0:15,0:13:19.01:0,19,230
chr10	54332069	.	AG	A	4833.77	PASS	AB=0.869;AC=24;AF=0.462;AN=52;BaseQRankSum=7.009;DP=637;FS=13.986;HRun=1;HaplotypeScore=169.5171;InbreedingCoeff=-0.2450;MQ=44.82;MQ0=31;MQRankSum=3.088;QD=10.69;ReadPosRankSum=4.232;VQSLOD=1.6937;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:11,15:23:36.68:364,0,37	1/1:3,10:11:13.27:230,13,0	./.	./.	0/1:27,0:26:90.27:191,0,90	0/1:24,0:20:98.99:205,0,99	0/1:21,1:18:55.69:121,0,56	0/0:33,0:30:65.49:0,65,465	0/1:24,2:22:99:280,0,181	0/1:28,0:21:99:175,0,128	0/1:20,1:21:99:230,0,127	0/0:31,0:29:59.93:0,60,928	0/0:35,0:33:87.39:0,87,1246	0/1:22,0:20:8.94:152,0,9	0/1:30,1:24:99:234,0,111	0/1:12,13:22:49.70:470,0,50	0/1:9,12:19:4.02:240,0,4	0/1:9,12:20:31.43:251,0,31	0/1:5,9:11:20.41:238,0,20	1/1:11,14:20:5.21:413,5,0	1/1:2,4:5:4.68:76,5,0	0/0:26,0:26:57.89:0,58,836	0/0:28,0:26:66.15:0,66,969	0/0:32,0:32:78.25:0,78,1155	0/1:18,1:18:99:141,0,186	0/1:37,1:25:99:371,0,168	1/1:10,17:25:19.82:442,20,0	0/1:13,0:11:11.66:12,0,201
chr10	54332070	.	G	GA	5964.33	PASS	AB=0.861;AC=30;AF=0.577;AN=52;BaseQRankSum=6.956;DP=636;FS=4.767;HRun=1;HaplotypeScore=165.6450;InbreedingCoeff=-0.1119;MQ=44.98;MQ0=31;MQRankSum=0.419;QD=11.72;ReadPosRankSum=0.511;VQSLOD=3.3846;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:23:30.15:225,0,30	1/1:13,0:11:9.93:154,10,0	./.	./.	1/1:18,9:25:36.47:460,36,0	0/1:14,9:19:17.28:408,0,17	1/1:6,15:17:28.11:295,28,0	0/1:32,1:30:19.97:20,0,133	0/1:14,12:22:99:447,0,124	0/1:16,10:19:66.61:346,0,67	0/1:10,12:22:33.56:378,0,34	0/0:31,0:29:59.10:0,59,773	0/0:35,0:33:78.84:0,79,1006	0/1:21,0:19:7.87:97,0,8	1/1:18,13:24:0.93:541,1,0	1/1:22,4:24:18.26:397,18,0	0/1:21,0:19:13.39:138,0,13	0/1:20,1:20:40.99:160,0,41	1/1:13,0:11:5.78:157,6,0	1/1:24,0:20:16.39:306,16,0	0/1:6,0:5:0.52:27,0,1	0/1:24,2:26:26.94:27,0,642	0/0:29,0:27:65.34:0,65,843	0/0:32,0:32:76.30:0,76,963	0/1:14,7:19:93.27:284,0,93	0/1:25,14:26:99:571,0,102	1/1:25,2:25:13.83:385,14,0	0/1:12,1:11:88.21:140,0,88
chr10	54332750	.	T	TA	3213.15	PASS	AB=0.783;AC=24;AF=0.429;AN=56;BaseQRankSum=-11.231;DP=591;FS=0.384;HRun=14;HaplotypeScore=82.4971;InbreedingCoeff=0.5639;MQ=77.28;MQ0=0;MQRankSum=0.018;QD=10.33;ReadPosRankSum=-1.918;VQSLOD=2.6883;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:36:54.92:0,55,158	0/0:0,0:6:12.22:0,12,35	0/1:14,0:13:6.64:7,0,13	0/1:16,0:15:10.59:21,0,11	0/1:7,12:20:15.40:229,0,15	1/1:7,22:30:27.07:407,27,0	0/1:6,11:17:27.79:155,0,28	1/1:10,18:31:5.08:401,5,0	1/1:7,13:21:13.57:232,14,0	1/1:9,16:26:26.04:330,26,0	1/1:1,11:14:38.63:311,39,0	0/1:11,2:13:29.09:29,0,92	0/0:25,1:27:19.89:0,20,246	1/1:7,14:21:21:185,21,0	0/1:7,11:18:5.54:204,0,6	0/0:4,0:19:30.52:0,31,88	0/0:5,0:24:33.49:0,33,107	0/0:1,0:15:26.92:0,27,80	0/0:15,0:16:11.57:0,12,175	0/0:21,0:23:17.21:0,17,208	0/0:18,0:18:35.25:0,35,223	0/0:18,1:19:13.31:0,13,206	0/0:19,0:20:41.25:0,41,266	0/0:21,0:25:46.28:0,46,293	1/1:6,19:27:15.98:299,16,0	1/1:11,21:32:37.70:450,38,0	0/0:31,0:32:60.84:0,61,387	1/1:3,6:9:18:158,18,0
chr10	54333663	.	CGTGTGTGTGTGTGTGTGT	C	1608.82	PASS	AB=0.660;AC=9;AF=0.180;AN=50;BaseQRankSum=4.994;DP=655;FS=17.575;HRun=0;HaplotypeScore=255.5287;InbreedingCoeff=0.7134;MQ=63.16;MQ0=10;MQRankSum=-5.349;QD=13.41;ReadPosRankSum=-1.378;VQSLOD=1.0260;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:48.16:0,48,2526	./.	./.	./.	0/0:16,0:15:18.06:0,18,1149	0/0:21,0:19:20.17:0,20,1494	0/0:30,0:30:17.96:0,18,789	0/0:26,0:25:20.53:0,21,431	0/0:24,0:24:21.07:0,21,1502	0/0:20,0:20:32.31:0,32,1804	0/0:16,0:16:7.69:0,8,483	1/1:14,7:20:8.94:307,9,0	1/1:12,11:23:14.70:724,15,0	0/0:17,0:24:22.41:0,22,1236	0/0:25,0:24:28.74:0,29,1842	0/0:17,0:17:14.97:0,15,508	0/0:30,0:30:50.15:0,50,2922	0/0:20,0:31:30.02:0,30,1370	0/0:12,0:12:7.26:0,7,127	0/0:17,0:17:21.07:0,21,1501	0/0:54,0:52:24.70:0,25,1894	1/1:11,11:23:5.05:132,5,0	1/1:12,9:21:5.98:165,6,0	0/1:15,16:31:89.17:423,0,89	0/0:14,0:22:15.04:0,15,1014	0/0:28,0:27:41.73:0,42,2208	0/0:16,0:16:12.04:0,12,851	0/0:9,0:17:18.06:0,18,1012
chr10	54335475	.	T	TACTTATGGCTACTTTAAA	2068.96	PASS	AB=0.652;AC=26;AF=0.929;AN=28;BaseQRankSum=-2.555;DP=29;FS=18.468;HRun=0;HaplotypeScore=20.2431;InbreedingCoeff=-0.2703;MQ=160.81;MQ0=0;MQRankSum=-1.663;QD=79.58;ReadPosRankSum=1.014;VQSLOD=1.1809;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,0:2:2.99:23,3,0	./.	0/1:3,1:7:35.97:1043,0,36	0/1:2,0:4:59.31:420,0,59	1/1:1,0:1:3.01:50,3,0	./.	./.	1/1:1,0:1:3.01:71,3,0	./.	./.	1/1:1,0:1:3.01:69,3,0	1/1:1,0:1:3.01:76,3,0	./.	./.	./.	./.	./.	1/1:3,0:3:3.01:77,3,0	./.	1/1:1,0:1:3.01:69,3,0	1/1:1,0:1:3.01:73,3,0	1/1:1,0:1:3:26,3,0	./.	./.	1/1:1,0:1:3.01:70,3,0	./.	1/1:1,0:1:2.99:24,3,0	1/1:1,0:1:3.01:64,3,0
chr10	54337889	.	GT	G	8307.60	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=14.467;DP=639;FS=15.097;HRun=1;HaplotypeScore=73.6877;InbreedingCoeff=0.9998;MQ=87.95;MQ0=0;MQRankSum=-3.119;QD=39.37;ReadPosRankSum=4.315;VQSLOD=3.8684;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,41:41:99:1594,114,0	1/1:0,12:12:36.12:504,36,0	0/0:25,0:25:69.10:0,69,1055	0/0:24,0:24:62.02:0,62,849	0/0:27,0:27:81.28:0,81,1295	0/0:26,0:26:75.26:0,75,1193	0/0:19,0:19:57.18:0,57,888	0/0:34,0:34:99:0,102,1630	0/0:19,0:19:57.19:0,57,907	0/0:24,0:24:69.23:0,69,1084	0/0:14,0:14:39.13:0,39,621	0/0:28,0:28:84.29:0,84,1338	0/0:26,0:26:78.27:0,78,1239	0/0:20,0:20:57.19:0,57,893	0/0:26,0:26:78.25:0,78,1224	1/1:0,25:25:75.25:1049,75,0	1/1:0,28:28:78.26:1091,78,0	1/1:0,22:22:63.21:881,63,0	1/1:0,18:18:54.18:755,54,0	1/1:0,26:26:69.23:965,69,0	1/1:0,18:18:51.17:713,51,0	0/0:9,0:9:27.09:0,27,432	0/0:24,0:24:72.23:0,72,1122	0/0:24,0:24:72.25:0,72,1148	0/0:14,0:14:39.12:0,39,602	0/0:25,0:25:72.25:0,72,1150	1/1:0,21:21:54.18:755,54,0	0/0:20,0:20:60.20:0,60,955
chr10	54342103	.	A	ACACACACACACG	3694.40	PASS	AB=0.950;AC=20;AF=0.357;AN=56;BaseQRankSum=7.011;DP=743;FS=0.000;HRun=0;HaplotypeScore=225.9751;InbreedingCoeff=-0.3038;MQ=49.00;MQ0=17;MQRankSum=-6.118;QD=7.22;ReadPosRankSum=-4.655;VQSLOD=1.4706;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:26:13.73:98,14,0	0/1:13,0:12:9.97:115,0,10	0/0:24,0:4:8.99:0,9,74	0/0:23,0:3:3:0,3,27	0/0:24,0:22:0.94:0,1,1	0/1:19,0:19:90.17:208,0,90	0/1:37,0:37:99:148,0,177	0/1:46,0:44:61.30:61,0,486	0/1:28,0:27:99:202,0,160	0/1:35,0:33:99:353,0,332	0/1:14,0:14:0.54:1,0,58	0/0:45,0:43:86.79:0,87,1591	0/0:22,0:22:51.34:0,51,655	0/1:30,0:29:99:254,0,139	0/1:31,0:31:0.44:0,0,257	0/1:4,16:23:24.03:226,0,24	0/1:29,0:28:1.68:371,0,2	0/1:4,18:25:4.90:300,0,5	0/1:22,0:22:99:178,0,250	0/0:10,0:10:11.99:0,12,90	0/1:49,0:47:18.96:19,0,152	0/0:22,0:21:38.53:0,39,596	0/0:20,0:18:44.76:0,45,581	0/0:41,0:41:84.52:0,85,1470	0/1:21,0:20:99:109,0,169	0/1:36,0:36:99:594,0,225	0/1:19,0:18:29.90:264,0,30	0/1:9,0:9:49.77:194,0,50
chr10	54342105	.	A	ACACACACACG	2760.07	PASS	AB=0.971;AC=20;AF=0.357;AN=56;BaseQRankSum=7.639;DP=753;FS=3.632;HRun=0;HaplotypeScore=211.8232;InbreedingCoeff=-0.2569;MQ=47.99;MQ0=18;MQRankSum=-6.249;QD=5.47;ReadPosRankSum=-3.234;VQSLOD=2.2980;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:27:13.26:97,13,0	0/1:2,10:13:8.97:148,0,9	0/0:22,0:3:8.99:0,9,74	0/0:26,0:4:3:0,3,27	0/0:24,0:22:0:0,0,1	0/1:19,0:19:77.85:175,0,78	0/1:37,0:37:91.57:92,0,178	0/1:44,0:42:41.15:41,0,535	0/1:29,0:28:99:126,0,151	0/1:36,0:34:99:235,0,353	0/0:14,0:14:5.43:0,5,64	0/0:47,0:45:83.78:0,84,1462	0/0:22,0:22:51.11:0,51,627	0/1:30,0:29:99:247,0,136	0/1:30,0:30:56.29:56,0,255	0/1:24,0:24:46.92:206,0,47	1/1:31,0:30:14.68:396,15,0	0/1:25,0:25:4.43:255,0,4	0/1:22,0:22:46.99:47,0,284	0/0:10,0:10:11.65:0,12,90	0/1:49,0:46:18.96:19,0,152	0/0:22,0:21:41.72:0,42,602	0/0:20,0:18:44.81:0,45,548	0/0:41,0:41:84.52:0,85,1367	0/1:23,0:22:86.44:86,0,166	0/1:37,0:37:99:295,0,262	0/1:19,0:18:43.41:233,0,43	0/1:9,0:9:49.77:168,0,50
chr10	54342111	.	A	ACACACACACGCACACG	6392.85	PASS	AB=0.971;AC=20;AF=0.357;AN=56;BaseQRankSum=0.659;DP=764;FS=16.749;HRun=0;HaplotypeScore=254.0346;InbreedingCoeff=-0.2772;MQ=47.70;MQ0=17;MQRankSum=-2.993;QD=12.73;ReadPosRankSum=2.261;VQSLOD=1.5693;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:4.68:0,5,94	0/1:12,0:11:26.73:66,0,27	0/0:20,0:3:2.99:0,3,23	0/0:29,0:5:9:0,9,112	0/0:25,0:23:3.90:0,4,20	0/1:16,0:17:25.63:372,0,26	0/1:39,0:39:13.56:253,0,14	0/1:46,0:44:99:616,0,157	0/1:28,0:27:9.83:481,0,10	0/1:36,0:34:27.13:761,0,27	0/1:15,0:15:10.51:78,0,11	0/0:47,0:45:95.39:0,95,2283	0/0:22,0:22:51.13:0,51,1002	0/1:37,0:36:79.40:457,0,79	1/1:31,0:31:38.98:583,39,0	0/1:26,0:26:80.40:171,0,80	0/1:29,0:28:74.87:207,0,75	0/1:22,0:22:17.21:80,0,17	0/1:23,0:23:31.29:31,0,346	0/0:9,0:9:1.68:0,2,6	0/1:48,0:45:42.50:43,0,159	0/0:22,0:21:39.08:0,39,884	0/0:21,0:19:54.08:0,54,1011	0/0:40,0:40:90.73:0,91,2198	0/1:22,0:21:15.26:305,0,15	0/1:14,21:43:13.55:1235,0,14	0/1:19,0:18:33.82:300,0,34	1/1:9,0:9:18.62:354,19,0
chr10	54342113	.	A	ACG	67.25	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=5.138;DP=768;FS=1.355;HRun=0;HaplotypeScore=132.7963;InbreedingCoeff=0.1195;MQ=46.63;MQ0=18;MQRankSum=-2.759;QD=0.45;ReadPosRankSum=-0.028;VQSLOD=2.0789;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:26:9.02:80,0,9	1/1:11,0:10:5.04:37,5,0	0/0:20,0:3:8.99:0,9,74	0/0:29,0:4:8.97:0,9,71	0/0:26,0:24:3:0,3,25	0/0:18,0:18:28.97:0,29,220	0/0:39,0:40:33.65:0,34,325	0/1:49,0:46:10.69:11,0,697	0/0:32,0:31:18.39:0,18,299	0/0:35,0:33:85.41:0,85,654	0/0:15,0:15:14.87:0,15,118	0/0:47,0:45:92.96:0,93,977	0/0:23,0:23:56.08:0,56,498	0/0:30,0:38:24.70:0,25,247	0/0:31,0:31:37.42:0,37,374	0/1:26,0:26:38.94:39,0,84	0/0:13,16:28:30.60:0,31,213	0/1:21,0:21:15.37:15,0,64	0/0:23,0:23:56.16:0,56,463	0/0:9,0:9:12.40:0,12,91	0/0:51,0:48:23.93:0,24,234	0/0:22,0:21:41.99:0,42,427	0/0:22,0:20:50.79:0,51,448	0/0:41,0:41:87.97:0,88,938	0/0:21,0:20:27.54:0,28,251	0/0:37,0:37:15.69:0,16,351	0/1:17,0:16:9.33:9,0,77	0/0:8,0:8:12.67:0,13,104
chr10	54342119	.	A	ACG	1106.73	PASS	AB=0.953;AC=18;AF=0.321;AN=56;BaseQRankSum=4.237;DP=757;FS=0.419;HRun=0;HaplotypeScore=122.1796;InbreedingCoeff=-0.2401;MQ=46.87;MQ0=16;MQRankSum=-2.030;QD=2.57;ReadPosRankSum=-0.134;VQSLOD=2.3987;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:13.83:0,14,121	1/1:12,0:11:4.26:13,4,0	0/0:14,0:2:6:0,6,64	0/0:28,0:6:17.92:0,18,144	0/0:9,17:24:5.99:0,6,50	0/1:17,0:17:19.98:20,0,102	0/1:17,18:35:16.78:17,0,177	0/1:45,0:42:99:217,0,334	0/1:31,0:30:99:148,0,164	0/1:36,0:34:99:131,0,285	0/1:16,0:16:24.85:25,0,85	0/0:45,0:43:92.99:0,93,981	0/0:24,0:24:54.59:0,55,480	0/1:38,0:37:36.27:36,0,88	0/1:31,0:31:72.96:198,0,73	0/1:28,0:28:36.62:37,0,101	0/0:30,0:29:33.91:0,34,259	0/0:21,0:21:4.75:0,5,60	0/0:26,0:26:2.34:0,2,321	1/1:9,0:9:8.57:67,9,0	0/1:27,22:47:47.21:47,0,99	0/0:21,0:20:38.84:0,39,389	0/0:22,0:20:53.95:0,54,486	0/0:42,0:42:90.48:0,90,956	0/1:20,0:19:71.73:84,0,72	0/1:38,0:38:46.33:46,0,276	0/1:17,0:16:18.49:146,0,18	0/1:8,0:8:22.16:35,0,22
chr10	54345027	.	TG	T	8349.70	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=16.530;DP=682;FS=21.759;HRun=5;HaplotypeScore=83.6022;InbreedingCoeff=0.9918;MQ=89.22;MQ0=0;MQRankSum=-1.260;QD=30.36;ReadPosRankSum=0.666;VQSLOD=3.0413;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,123,1676	0/0:14,0:14:39.12:0,39,518	0/0:25,0:25:69.21:0,69,908	0/0:29,0:29:59.68:0,60,756	1/1:0,26:26:78.22:883,78,0	1/1:1,18:19:51.15:578,51,0	1/1:1,24:25:57.16:647,57,0	1/1:4,28:32:84.21:934,84,0	1/1:1,28:29:75.21:850,75,0	1/1:0,16:16:48.14:544,48,0	1/1:0,12:12:36.10:408,36,0	0/0:25,0:25:69.23:0,69,944	0/0:24,0:24:66.22:0,66,903	1/1:1,27:28:78.22:885,78,0	1/1:0,26:26:72.21:817,72,0	0/0:22,1:23:35.19:0,35,868	0/0:25,0:25:75.25:0,75,1025	0/0:14,0:14:36.10:0,36,473	0/0:29,0:29:66.22:0,66,899	0/0:18,0:18:54.15:0,54,700	0/0:31,0:31:93.31:0,93,1270	0/0:29,0:29:75.25:0,75,1014	0/0:26,0:26:66.19:0,66,869	0/0:19,0:19:57.15:0,57,757	1/1:0,23:23:60.17:680,60,0	1/1:2,31:33:90.25:1021,90,0	0/0:34,0:34:99:0,102,1339	1/1:1,5:6:9.03:102,9,0
chr10	54346351	.	G	GCTGCTGTGAGTGC	67131.54	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=-4.846;DP=673;FS=0.000;HRun=0;HaplotypeScore=204.8519;InbreedingCoeff=0.9979;MQ=74.66;MQ0=0;MQRankSum=-16.270;QD=129.85;ReadPosRankSum=2.315;VQSLOD=4.7086;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:25,14:44:66.23:4267,66,0	1/1:7,3:10:21.07:1358,21,0	0/0:25,0:25:54.16:0,54,1858	0/0:17,0:17:42.12:0,42,1284	1/1:13,14:31:45.15:2954,45,0	1/1:15,8:26:51.18:3282,51,0	1/1:21,8:32:66.18:3943,66,0	1/1:33,4:40:99:5555,111,0	1/1:6,13:21:51.18:3335,51,0	1/1:15,12:29:84.29:4640,84,0	1/1:8,9:20:33.11:2166,33,0	0/0:30,0:30:84.27:0,84,3176	0/0:14,0:14:42.13:0,42,1513	1/1:6,10:20:48.16:2992,48,0	1/1:7,18:30:66.23:4270,66,0	1/1:14,15:33:75.73:4581,76,0	1/1:16,10:28:66.23:4291,66,0	1/1:4,6:15:24.08:1515,24,0	1/1:7,6:13:33.11:1919,33,0	1/1:8,11:23:42.10:2581,42,0	1/1:17,2:22:30.06:1784,30,0	0/0:22,0:22:60.18:0,60,2143	0/0:20,0:20:57.17:0,57,2173	0/0:28,0:28:75.24:0,75,2777	1/1:4,8:16:33.11:2159,33,0	1/1:9,10:23:63.21:3348,63,0	1/1:11,16:29:78.27:4832,78,0	1/1:5,5:12:21.07:1361,21,0
chr10	54346625	.	G	GAGGCT	19874	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=0.371;DP=684;FS=0.427;HRun=0;HaplotypeScore=142.6637;InbreedingCoeff=0.9474;MQ=75.13;MQ0=0;MQRankSum=-11.247;QD=38.37;ReadPosRankSum=-1.600;VQSLOD=4.6217;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:27,24:53:54.19:1548,54,0	1/1:2,10:12:15.05:440,15,0	0/0:23,0:24:39.13:0,39,708	0/0:24,0:24:39.12:0,39,668	1/1:10,9:18:6.02:142,6,0	1/1:14,17:32:45.15:1320,45,0	1/1:5,19:24:41.95:1164,42,0	1/1:7,16:25:54.06:1154,54,0	1/1:5,17:23:45.15:1289,45,0	1/1:19,11:32:36.12:1005,36,0	1/1:11,5:17:12.04:351,12,0	0/0:28,0:28:72.22:0,72,1359	0/0:25,0:25:54.19:0,54,1047	1/1:5,21:27:45.15:1319,45,0	1/1:5,26:32:75.26:2068,75,0	1/1:5,18:26:42.14:1231,42,0	1/1:8,15:23:33.11:968,33,0	1/1:6,8:17:15.05:440,15,0	1/1:12,8:23:42.09:958,42,0	1/1:11,15:27:33.11:959,33,0	1/1:12,10:23:18.50:428,18,0	0/0:22,0:22:42.13:0,42,781	0/0:15,0:15:30.10:0,30,551	0/0:27,0:27:78.25:0,78,1469	1/1:6,10:16:15.05:440,15,0	1/1:14,17:32:57.06:1278,57,0	1/1:4,22:28:41.77:1197,42,0	1/1:3,4:7:6.02:176,6,0
chr10	54347558	.	AATGAAGGGG	A	29414.49	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=15.462;DP=618;FS=0.348;HRun=0;HaplotypeScore=187.6425;InbreedingCoeff=0.9875;MQ=71.04;MQ0=0;MQRankSum=-15.125;QD=64.65;ReadPosRankSum=0.719;VQSLOD=4.7859;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,42:42:72.18:2259,72,0	1/1:0,15:15:32.84:994,33,0	0/0:23,0:23:69.19:0,69,2672	0/0:13,0:14:32.50:0,33,1395	1/1:0,20:20:39.05:1184,39,0	1/1:0,13:13:33.11:1072,33,0	1/1:0,32:32:63.22:2036,63,0	1/1:0,33:33:93.16:2306,93,0	1/1:0,20:20:35.82:1169,36,0	1/1:0,23:23:66.08:1719,66,0	1/1:0,15:15:12.04:389,12,0	0/0:26,0:26:78.27:0,78,3673	0/0:35,0:35:99:0,105,4802	1/1:0,17:17:39.13:1267,39,0	1/1:0,23:23:45.15:1462,45,0	1/1:1,23:24:54.19:1755,54,0	1/1:0,17:17:21.07:683,21,0	1/1:0,16:16:30.10:976,30,0	1/1:0,27:27:78.10:1832,78,0	1/1:0,14:14:27.09:835,27,0	1/1:0,18:18:15.05:486,15,0	0/0:18,0:18:54.17:0,54,2530	0/0:16,0:16:48.16:0,48,2108	0/0:31,0:31:93.31:0,93,4505	1/1:0,18:18:51.11:1575,51,0	1/1:0,28:28:81.23:2297,81,0	1/1:0,32:32:81.28:2631,81,0	1/1:0,8:8:15.05:488,15,0
chr10	54348401	.	G	GT	22275.78	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=-15.924;DP=709;FS=6.560;HRun=1;HaplotypeScore=58.2835;InbreedingCoeff=0.9998;MQ=87.11;MQ0=0;MQRankSum=-5.972;QD=42.11;ReadPosRankSum=3.355;VQSLOD=5.1869;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,34:35:87.29:1304,87,0	1/1:0,13:13:39.13:585,39,0	0/0:26,0:26:55.15:0,55,833	0/0:25,0:25:51.45:0,51,879	1/1:1,31:32:87.29:1304,87,0	1/1:0,28:28:84.28:1259,84,0	1/1:2,21:23:60.20:900,60,0	1/1:1,31:32:93.31:1392,93,0	1/1:0,19:19:51.17:764,51,0	1/1:0,27:27:78.23:1127,78,0	1/1:1,22:23:63.21:944,63,0	0/0:29,0:29:87.28:0,87,1129	0/0:22,0:22:66.20:0,66,841	1/1:1,19:20:54.18:810,54,0	1/1:0,32:32:90.30:1348,90,0	1/1:0,24:24:72.24:1079,72,0	1/1:1,22:23:63.21:944,63,0	1/1:0,19:19:57.19:854,57,0	1/1:4,17:21:63.21:940,63,0	1/1:1,35:36:99:1505,102,0	1/1:0,23:23:66.22:989,66,0	0/0:30,0:30:87.28:0,87,1129	0/0:24,0:24:72.23:0,72,934	0/0:24,0:24:72.22:0,72,919	1/1:1,30:31:90.30:1349,90,0	1/1:1,27:27:84.28:1259,84,0	1/1:0,28:28:81.27:1214,81,0	1/1:0,12:12:27.09:405,27,0
chr10	54349494	.	T	TC	26448.74	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=-12.750;DP=854;FS=6.245;HRun=2;HaplotypeScore=80.1515;InbreedingCoeff=1.0000;MQ=89.22;MQ0=0;MQRankSum=-7.622;QD=39.77;ReadPosRankSum=3.487;VQSLOD=5.3042;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,51:54:99:2160,151,0	1/1:1,15:16:48.16:675,48,0	0/0:31,0:31:90.28:0,90,1096	0/0:34,0:34:98.31:0,98,1197	1/1:1,18:19:57.19:817,57,0	1/1:2,25:27:69.23:994,69,0	1/1:2,35:37:96.28:1359,96,0	1/1:1,39:40:99:1626,117,0	1/1:1,32:33:96.32:1382,96,0	1/1:0,36:36:99:1474,105,0	1/1:0,25:25:75.25:1079,75,0	0/0:27,0:27:78.24:0,78,967	0/0:23,0:23:69.22:0,69,855	1/1:4,29:33:78.26:1123,78,0	1/1:1,38:39:99:1469,102,0	1/1:0,34:34:99:1467,102,0	1/1:2,32:34:93.31:1327,93,0	1/1:4,25:29:72.24:1032,72,0	1/1:1,28:29:84.28:1209,84,0	1/1:1,27:28:78.26:1122,78,0	1/1:2,52:53:99:2203,154,0	0/0:31,0:31:90.26:0,90,1101	0/0:22,0:22:60.17:0,60,730	0/0:21,0:21:60.13:0,60,713	1/1:2,32:34:93.31:1338,93,0	1/1:1,25:26:75.25:1080,75,0	1/1:1,23:23:69.23:993,69,0	1/1:2,12:14:36.12:518,36,0
chr10	54350870	.	TTTATTATTA	T	6277.91	PASS	AB=0.890;AC=40;AF=0.714;AN=56;BaseQRankSum=0.172;DP=431;FS=4.760;HRun=0;HaplotypeScore=150.5063;InbreedingCoeff=0.5916;MQ=60.99;MQ0=3;MQRankSum=-2.105;QD=16.61;ReadPosRankSum=-0.603;VQSLOD=3.4099;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:18:10.84:124,11,0	1/1:0,0:9:8.23:221,8,0	0/0:13,0:9:18.06:0,18,412	0/0:3,0:2:3.01:0,3,67	1/1:24,5:29:25.68:410,26,0	1/1:8,9:17:2.88:82,3,0	1/1:18,0:18:21.15:252,21,0	1/1:23,0:22:33.62:645,34,0	1/1:2,17:19:15.01:352,15,0	1/1:22,5:27:32.88:811,33,0	1/1:20,3:23:12.41:138,12,0	0/0:11,0:11:33.09:0,33,1088	0/0:7,0:7:18.06:0,18,512	1/1:3,16:19:1.86:79,2,0	1/1:13,2:17:27.05:465,27,0	1/1:0,0:11:0.26:160,0,0	1/1:5,0:22:5.98:47,6,0	1/1:5,0:19:16.18:158,16,0	0/1:11,0:13:99:262,0,169	1/1:3,0:15:27.56:349,28,0	1/1:2,0:2:3.01:43,3,0	0/0:1,0:1:3.01:0,3,142	0/0:8,0:8:15.05:0,15,604	0/0:10,0:10:24.08:0,24,846	1/1:20,8:28:24.70:470,25,0	1/1:7,15:22:15.97:589,16,0	0/1:19,0:20:99:407,0,120	1/1:6,0:5:12.01:213,12,0
chr10	54351620	.	A	AG	4381.24	PASS	AB=0.976;AC=39;AF=0.696;AN=56;BaseQRankSum=11.151;DP=489;FS=10.044;HRun=3;HaplotypeScore=91.7754;InbreedingCoeff=0.7646;MQ=75.09;MQ0=2;MQRankSum=-1.881;QD=13.52;ReadPosRankSum=3.579;VQSLOD=3.0697;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:29,1:30:42.46:387,42,0	1/1:4,0:4:0.68:34,1,0	0/0:27,0:23:55.53:0,56,666	0/0:39,0:31:77.24:0,77,852	1/1:9,0:9:17.50:101,17,0	1/1:13,1:14:14.56:222,15,0	1/1:23,0:23:13.66:267,14,0	1/1:14,0:14:30.95:175,31,0	1/1:16,0:16:38.87:234,39,0	1/1:10,0:10:19.46:108,19,0	1/1:8,0:8:14.58:87,15,0	0/0:26,0:26:78.22:0,78,913	0/0:21,0:21:63.19:0,63,749	1/1:19,0:19:46.72:279,47,0	1/1:13,0:13:35.01:201,35,0	1/1:9,0:9:22.18:124,22,0	1/1:30,0:30:67.73:431,68,0	1/1:28,0:28:71.11:466,71,0	1/1:12,0:12:34.43:179,34,0	0/1:7,0:7:6.28:63,0,6	1/1:40,1:41:66.15:499,66,0	0/0:3,0:3:9.02:0,9,99	0/0:4,0:4:12.04:0,12,144	0/0:44,0:44:99:0,120,1415	0/1:9,0:9:0.19:123,0,0	1/1:7,3:10:23.93:167,24,0	0/1:12,1:13:1.67:149,0,2	1/1:5,0:5:14.59:85,15,0
chr10	54351623	.	G	GT	11081.05	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=-7.513;DP=497;FS=17.053;HRun=3;HaplotypeScore=73.0287;InbreedingCoeff=0.9549;MQ=71.80;MQ0=2;MQRankSum=-3.649;QD=33.28;ReadPosRankSum=1.069;VQSLOD=3.2843;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,26:29:68.31:901,68,0	1/1:1,3:4:9.03:126,9,0	0/0:27,0:23:59.72:0,60,667	0/0:38,0:29:72.94:0,73,819	1/1:1,9:10:18.06:252,18,0	1/1:3,12:15:40.02:544,40,0	1/1:3,23:26:53.95:733,54,0	1/1:1,14:15:42.08:532,42,0	1/1:1,15:16:45.06:585,45,0	1/1:1,8:9:27.08:361,27,0	1/1:2,5:7:15.05:210,15,0	0/0:26,0:26:75.21:0,75,887	0/0:22,0:22:66.19:0,66,780	1/1:3,16:19:53.97:702,54,0	1/1:0,13:13:36.12:504,36,0	1/1:0,11:11:27:334,27,0	1/1:3,27:30:58.32:965,58,0	1/1:0,28:28:72.24:1006,72,0	1/1:0,14:14:42.11:555,42,0	1/1:2,6:8:18.02:230,18,0	1/1:4,35:40:91.50:1237,92,0	0/0:3,0:3:6.02:0,6,71	0/0:4,0:4:12.04:0,12,144	0/0:44,0:44:99:0,117,1391	1/1:2,8:10:24.08:333,24,0	1/1:3,8:11:27.07:353,27,0	1/1:5,8:13:30.10:408,30,0	1/1:0,5:5:15.05:210,15,0
chr10	54354004	.	CTGTG	C	823.66	PASS	AB=1.000;AC=9;AF=0.173;AN=52;BaseQRankSum=1.253;DP=694;FS=4.205;HRun=0;HaplotypeScore=131.0416;InbreedingCoeff=0.6173;MQ=58.23;MQ0=14;MQRankSum=-0.089;QD=5.64;ReadPosRankSum=0.786;VQSLOD=2.6343;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:26,11:38:9.02:122,9,0	0/0:8,0:13:2.16:0,2,12	./.	./.	0/0:21,0:21:5.89:0,6,71	0/0:14,0:14:8.65:0,9,153	0/0:17,0:20:7.86:0,8,134	0/0:23,0:22:13.81:0,14,171	0/0:24,0:30:20.61:0,21,316	0/0:24,0:24:39.05:0,39,549	0/0:24,0:23:17.33:0,17,250	0/1:28,0:27:13.57:14,0,582	0/0:25,0:26:10.56:0,11,534	0/0:23,0:23:14.41:0,14,243	0/0:32,0:32:24.05:0,24,343	1/1:17,7:24:9.03:140,9,0	1/1:19,7:27:21.01:280,21,0	1/1:25,3:29:7.31:412,7,0	0/0:21,0:18:15.05:0,15,256	0/0:17,0:16:6.01:0,6,72	0/0:30,0:30:9.02:0,9,131	0/0:24,0:24:33.11:0,33,656	0/0:20,0:20:21.07:0,21,434	0/0:30,0:30:42.10:0,42,850	0/0:18,0:18:6.02:0,6,109	0/0:32,0:33:47.33:0,47,828	0/0:21,0:20:9.50:0,9,136	0/0:11,0:11:6.02:0,6,130
chr10	54357031	.	TCTGACGG	T	3652.64	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=10.515;DP=664;FS=0.000;HRun=0;HaplotypeScore=151.1165;InbreedingCoeff=0.9929;MQ=80.59;MQ0=0;MQRankSum=-8.989;QD=48.06;ReadPosRankSum=-0.149;VQSLOD=3.4859;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,163,5802	0/0:10,0:10:30.10:0,30,1186	0/0:19,0:19:57.19:0,57,1868	0/0:22,0:22:42.16:0,42,1632	0/0:18,0:18:48.16:0,48,1748	0/0:27,0:27:78.25:0,78,2857	0/0:28,0:28:84.27:0,84,3131	0/0:29,0:29:84.26:0,84,2912	0/0:21,0:21:54.19:0,54,2063	0/0:24,0:24:66.70:0,67,2453	0/0:17,0:17:51.17:0,51,1866	0/0:19,0:19:57.17:0,57,2015	0/0:19,0:19:51.17:0,51,1881	0/0:24,0:24:69.22:0,69,2563	0/0:25,0:25:69.21:0,69,2340	0/0:30,0:30:90.31:0,90,3433	0/0:49,0:49:99:0,129,4955	0/0:24,0:24:66.23:0,66,2618	1/1:5,17:22:48.16:1038,48,0	1/1:2,13:15:30.10:769,30,0	1/1:2,12:14:18.06:461,18,0	0/0:26,0:26:72.23:0,72,2529	0/0:10,0:10:30.08:0,30,1011	0/0:38,0:38:99:0,114,4479	0/0:22,0:22:63.19:0,63,2244	0/0:27,0:27:72.22:0,72,2537	1/1:1,24:25:54.19:1384,54,0	0/0:5,0:5:15.05:0,15,594
chr10	54357121	.	TGG	T	651.82	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=3.588;DP=523;FS=7.483;HRun=4;HaplotypeScore=76.5690;InbreedingCoeff=0.8342;MQ=79.45;MQ0=8;MQRankSum=-1.338;QD=5.77;ReadPosRankSum=1.576;VQSLOD=-0.6178;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:27:20.53:383,21,0	1/1:10,0:10:5.91:43,6,0	0/0:29,0:26:47.13:0,47,631	0/0:31,0:23:65.78:0,66,583	0/0:6,0:6:14.74:0,15,115	0/0:14,0:14:31.16:0,31,250	0/0:27,0:27:68.71:0,69,553	0/0:29,0:29:85.56:0,86,737	0/0:11,0:11:28.08:0,28,224	0/0:18,0:18:45:0,45,412	0/0:10,0:9:23.84:0,24,200	0/0:20,0:20:59.91:0,60,564	0/0:16,0:16:44.99:0,45,472	0/0:16,0:16:30.84:0,31,229	0/0:16,0:16:33.74:0,34,259	1/1:12,0:12:21.86:195,22,0	1/1:1,29:30:9.02:115,9,0	1/1:3,16:19:6.01:71,6,0	0/0:11,0:11:32.35:0,32,269	0/1:15,0:15:5.74:6,0,214	0/0:28,0:26:53.90:0,54,455	0/0:24,0:24:56.26:0,56,480	0/0:16,0:16:43.10:0,43,376	0/0:29,0:29:80.28:0,80,810	0/0:15,0:15:29.67:0,30,298	0/0:14,0:14:38:0,38,320	0/0:21,0:21:16.38:0,16,272	0/0:9,0:8:19.25:0,19,140
chr10	54357122	.	GGGGTGT	G	621.39	PASS	AB=0.990;AC=12;AF=0.214;AN=56;BaseQRankSum=4.625;DP=539;FS=14.237;HRun=0;HaplotypeScore=112.0314;InbreedingCoeff=0.1325;MQ=78.31;MQ0=8;MQRankSum=-2.375;QD=3.63;ReadPosRankSum=0.167;VQSLOD=1.0732;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:27:99:243,0,333	1/1:0,10:10:5.92:89,6,0	0/0:29,0:26:47.13:0,47,631	0/0:30,0:22:65.78:0,66,583	0/0:6,0:6:14.61:0,15,166	0/0:14,0:14:31.15:0,31,250	0/0:27,0:27:35.40:0,35,569	0/0:29,0:29:85.73:0,86,765	0/1:12,0:12:51.07:51,0,182	0/0:17,0:17:45:0,45,411	0/0:10,0:9:23.84:0,24,200	0/0:20,0:20:59.97:0,60,777	0/0:19,0:19:57.09:0,57,1024	0/1:17,0:17:52.24:52,0,179	0/1:17,0:17:9.65:10,0,213	1/1:11,0:12:21.73:183,22,0	0/1:30,0:31:6.15:6,0,44	0/1:17,1:18:20.37:67,0,20	0/0:12,0:12:32.36:0,32,322	0/0:15,0:15:22.25:0,22,424	0/0:28,0:26:34.67:0,35,564	0/0:27,0:27:62.10:0,62,724	0/0:16,0:16:44.91:0,45,686	0/0:30,0:30:89.81:0,90,1464	0/0:19,0:19:36.25:0,36,331	0/1:17,0:17:35.22:35,0,272	0/0:20,0:20:32.57:0,33,550	0/1:10,0:9:40.70:41,0,106
chr10	54357124	.	GGTGTGT	G	687.58	PASS	AB=0.835;AC=18;AF=0.360;AN=50;BaseQRankSum=3.858;DP=567;FS=18.321;HRun=0;HaplotypeScore=116.3191;InbreedingCoeff=0.3318;MQ=75.37;MQ0=9;MQRankSum=-3.032;QD=3.37;ReadPosRankSum=-1.204;VQSLOD=1.0022;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:34:34.05:0,34,784	1/1:10,0:10:2.87:54,3,0	./.	./.	0/0:7,0:8:11.16:0,11,163	0/1:10,2:14:0:0,0,0	0/1:24,3:27:49.91:50,0,52	0/0:29,0:29:5.95:0,6,42	1/1:8,4:12:6.02:121,6,0	1/1:17,0:17:0.47:1,0,0	./.	0/0:21,0:21:18.04:0,18,402	0/0:19,0:19:30.10:0,30,758	1/1:11,3:16:11.91:159,12,0	1/1:12,6:19:8.98:104,9,0	0/0:12,0:12:2.60:0,3,10	0/0:32,0:32:8.52:0,9,110	0/1:19,0:19:40:40,0,180	0/0:16,0:16:9.02:0,9,116	0/0:14,0:17:15.02:0,15,165	0/0:28,0:26:12.49:0,12,166	0/0:31,0:31:13.99:0,14,345	0/0:16,0:16:21.07:0,21,411	0/0:31,0:33:36.11:0,36,854	0/1:14,0:20:19.81:20,0,32	0/1:13,6:19:48.21:170,0,48	0/1:15,0:20:20.68:21,0,237	1/1:6,3:9:6.02:102,6,0
chr10	54359254	.	TTG	T	3092.77	PASS	AB=0.909;AC=18;AF=0.321;AN=56;BaseQRankSum=10.360;DP=991;FS=0.372;HRun=0;HaplotypeScore=130.0389;InbreedingCoeff=0.2962;MQ=55.92;MQ0=24;MQRankSum=2.200;QD=7.77;ReadPosRankSum=1.691;VQSLOD=3.1055;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:24,19:45:73.08:842,73,0	1/1:4,7:11:21.06:250,21,0	0/0:76,0:23:25.37:0,25,346	0/0:82,0:31:21.07:0,21,437	0/1:17,3:20:41.38:41,0,351	0/0:39,1:40:45.50:0,46,1102	0/0:22,0:22:36.12:0,36,573	0/1:45,3:48:25.52:26,0,1010	0/1:40,2:42:1.91:2,0,1318	0/1:45,4:49:30.07:30,0,1420	0/0:26,1:27:9.46:0,9,611	0/0:31,2:33:0.71:0,1,969	0/0:31,0:31:42.94:0,43,1126	0/0:32,4:36:36.47:0,36,1052	0/0:49,3:52:48.85:0,49,1720	1/1:5,10:17:41.78:446,42,0	1/1:12,20:32:77.59:900,78,0	1/1:7,23:30:10.59:613,11,0	0/0:20,0:19:33.10:0,33,494	0/1:37,5:42:37.61:38,0,1354	0/0:48,2:51:21.77:0,22,1278	0/0:21,1:23:27.43:0,27,893	0/1:23,2:25:17.32:17,0,669	0/0:44,0:44:57.54:0,58,1393	0/0:20,2:23:0.36:0,0,468	0/0:28,2:29:30.35:0,30,900	0/1:15,2:18:43.55:44,0,484	0/1:17,2:19:26.37:26,0,575
chr10	54360498	.	ATCTCTCTCTCTCTCTC	A	2405.49	PASS	AB=0.864;AC=22;AF=0.440;AN=50;BaseQRankSum=4.667;DP=642;FS=1.876;HRun=0;HaplotypeScore=276.7448;InbreedingCoeff=0.5723;MQ=61.01;MQ0=23;MQRankSum=-2.658;QD=8.18;ReadPosRankSum=-0.723;VQSLOD=2.2429;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:26,2:28:1.35:4,1,0	1/1:4,0:5:6.02:149,6,0	0/0:34,0:20:0.47:0,0,1	./.	./.	1/1:17,5:20:2.17:127,2,0	0/1:21,7:28:0.11:0,0,0	0/0:37,0:37:0.89:0,1,2	1/1:16,4:20:6.02:248,6,0	0/1:22,4:26:98.75:224,0,99	0/0:3,4:7:0:0,0,0	0/0:30,0:30:27.08:0,27,860	0/0:22,0:20:32.30:0,32,992	1/1:20,1:21:9.03:320,9,0	1/1:24,1:27:9.03:370,9,0	1/1:24,0:34:9.49:357,9,0	1/1:19,1:24:11.83:281,12,0	0/1:13,0:12:0:0,0,0	0/0:26,0:24:15.03:0,15,360	0/0:16,0:17:7.27:0,7,150	0/0:36,0:35:27.07:0,27,687	0/0:13,0:13:6.02:0,6,176	0/0:19,0:19:0:0,0,0	0/0:32,0:31:51.14:0,51,2420	0/1:11,4:15:0:0,0,0	1/1:21,4:25:12.04:476,12,0	0/0:10,0:16:14.98:0,15,232	./.
chr10	54360685	.	TACACACAC	T	8332.42	PASS	AB=0.931;AC=23;AF=0.411;AN=56;BaseQRankSum=5.466;DP=770;FS=0.828;HRun=0;HaplotypeScore=208.8342;InbreedingCoeff=0.8689;MQ=55.38;MQ0=14;MQRankSum=-9.293;QD=26.88;ReadPosRankSum=-4.048;VQSLOD=3.6621;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:31:51.15:0,51,1700	0/0:9,0:10:27.09:0,27,1069	0/0:35,0:16:14.88:0,15,276	0/0:30,0:17:4.31:0,4,115	1/1:11,21:30:20.90:472,21,0	1/1:7,19:26:30.10:773,30,0	1/1:8,19:26:9.99:457,10,0	0/1:25,2:25:64.49:326,0,64	1/1:10,16:26:30.09:772,30,0	1/1:15,28:42:77.81:1429,78,0	1/1:3,17:20:24.31:602,24,0	0/0:27,0:27:51.14:0,51,1819	0/0:20,0:22:45.61:0,46,1421	1/1:4,20:24:20.67:523,21,0	1/1:3,18:21:38.71:991,39,0	0/0:37,0:39:72.21:0,72,2576	0/0:36,0:36:84.09:0,84,2743	0/0:19,0:18:35.95:0,36,1174	0/0:7,0:13:24.03:0,24,398	0/0:4,0:18:39.10:0,39,775	0/0:29,0:64:93.01:0,93,1916	0/0:29,0:29:63.01:0,63,2209	0/0:8,0:16:24.06:0,24,704	0/0:17,0:44:57.08:0,57,1702	1/1:8,23:32:40.02:957,40,0	1/1:8,20:27:47.71:952,48,0	0/0:7,0:19:18.05:0,18,350	1/1:1,3:3:3.01:78,3,0
chr10	54360918	.	T	TG	7394.09	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-11.546;DP=641;FS=6.698;HRun=7;HaplotypeScore=59.7129;InbreedingCoeff=0.9963;MQ=72.29;MQ0=0;MQRankSum=-2.295;QD=27.28;ReadPosRankSum=-0.036;VQSLOD=5.3868;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,102,985	0/0:9,0:9:27.04:0,27,261	0/0:13,0:13:36.06:0,36,347	0/0:10,0:9:13.16:0,13,105	1/1:3,21:24:57.17:688,57,0	1/1:1,17:18:42.13:507,42,0	1/1:2,28:30:66.20:797,66,0	1/1:4,15:19:45.10:516,45,0	1/1:3,21:24:60.18:724,60,0	1/1:7,14:21:42.13:506,42,0	1/1:4,21:25:51.16:613,51,0	0/0:32,0:32:90.14:0,90,868	0/0:26,1:27:38.85:0,39,643	1/1:2,18:20:45.14:543,45,0	1/1:4,24:28:66.20:797,66,0	0/0:21,0:21:42.13:0,42,480	0/0:36,0:36:84.12:0,84,811	0/0:14,0:14:36.05:0,36,347	0/0:16,0:16:48.04:0,48,452	0/0:17,0:17:48.07:0,48,461	0/0:49,0:49:99:0,135,1289	0/0:22,0:22:66.11:0,66,637	0/0:12,0:12:33.05:0,33,318	0/0:20,0:20:54.08:0,54,521	1/1:1,21:22:45.14:543,45,0	1/1:4,23:27:66.20:796,66,0	0/0:29,0:28:87.14:0,87,840	1/1:1,12:13:30.09:362,30,0
chr10	54362456	.	ATGTGTGTGTATGTGTG	A	1850.82	PASS	AB=1.000;AC=10;AF=0.185;AN=54;BaseQRankSum=4.666;DP=845;FS=0.000;HRun=0;HaplotypeScore=330.4623;InbreedingCoeff=0.6696;MQ=50.37;MQ0=30;MQRankSum=-2.300;QD=11.22;ReadPosRankSum=-0.448;VQSLOD=1.5538;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:36,0:36:12.72:258,13,0	./.	0/0:24,0:4:2.17:0,2,46	0/0:45,0:8:4.66:0,5,108	0/0:28,0:28:37.75:0,38,885	0/0:23,0:23:38.70:0,39,893	0/0:36,0:34:63.52:0,64,1197	0/0:32,0:31:65.93:0,66,759	0/0:33,0:32:62.50:0,63,1101	0/0:39,0:38:89.62:0,90,1844	0/0:24,0:24:39.08:0,39,1090	0/0:46,0:44:99:0,108,3490	0/0:20,0:20:54.05:0,54,1474	0/0:32,0:32:51.57:0,52,1037	0/0:37,0:36:51.04:0,51,868	1/1:2,32:34:9.89:329,10,0	1/1:32,1:32:56.68:692,57,0	1/1:17,0:17:35.53:410,36,0	0/1:19,0:17:99:166,0,220	0/0:28,0:28:26.55:0,27,295	0/0:75,0:69:62.29:0,62,544	0/0:27,0:27:57.01:0,57,1545	0/0:18,0:18:42.08:0,42,1541	0/0:34,0:34:80.72:0,81,3185	0/0:20,0:19:30.35:0,30,561	0/0:34,0:32:72.22:0,72,1806	0/1:25,0:25:99:156,0,319	0/0:13,0:13:18.02:0,18,453
chr10	54362462	.	GTGTA	G	1369.31	PASS	AB=0.987;AC=16;AF=0.296;AN=54;BaseQRankSum=8.691;DP=820;FS=17.015;HRun=0;HaplotypeScore=181.5501;InbreedingCoeff=0.1399;MQ=49.83;MQ0=31;MQRankSum=-2.817;QD=3.57;ReadPosRankSum=-1.748;VQSLOD=1.5387;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:36,0:35:27.51:227,28,0	./.	0/0:22,0:3:2.17:0,2,46	0/0:37,0:7:4.66:0,5,108	0/1:26,0:26:43.78:44,0,287	0/1:22,0:22:10.34:10,0,213	0/1:34,0:32:8.92:9,0,333	0/0:30,0:28:54.80:0,55,531	0/1:36,1:36:63.03:63,0,349	0/1:39,1:39:88.87:89,0,536	0/1:21,0:21:5.72:6,0,237	0/0:46,0:44:32.14:0,32,1013	0/0:20,0:19:49.17:0,49,566	0/0:28,0:28:21.54:0,22,342	0/1:34,0:33:43.89:44,0,266	0/1:33,0:33:0.90:47,0,1	1/1:38,0:37:22.63:499,23,0	1/1:17,0:16:39.72:309,40,0	0/0:19,0:17:20.56:0,21,208	0/0:25,0:25:26.43:0,26,199	0/0:76,0:70:49.43:0,49,486	0/0:25,3:27:63:0,63,803	0/0:17,0:17:44.81:0,45,579	0/0:36,0:36:77.47:0,77,1258	0/0:18,0:17:7.21:0,7,170	0/1:35,0:33:90.26:90,0,487	0/0:24,0:24:19.55:0,20,242	0/1:10,1:11:39.05:100,0,39
chr10	54362464	.	GTA	G	1103.06	PASS	AB=0.989;AC=12;AF=0.222;AN=54;BaseQRankSum=6.642;DP=807;FS=22.664;HRun=0;HaplotypeScore=159.7097;InbreedingCoeff=0.5121;MQ=49.97;MQ0=30;MQRankSum=-1.486;QD=5.06;ReadPosRankSum=-3.467;VQSLOD=1.2151;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:35,1:35:29.80:244,30,0	./.	0/0:21,0:3:2.17:0,2,46	0/0:33,0:7:4.66:0,5,108	0/1:27,0:27:18.86:19,0,287	0/0:22,0:22:37.39:0,37,266	0/0:32,0:30:57:0,57,417	0/0:28,0:26:50.54:0,51,525	0/0:35,1:35:13.07:0,13,386	0/0:38,0:37:7.43:0,7,563	0/0:20,1:21:37.75:0,38,273	0/0:45,1:44:44.54:0,45,786	0/1:20,1:20:23.73:24,0,390	0/0:25,0:25:49.38:0,49,375	0/0:34,0:33:14.46:0,14,276	1/1:32,1:33:8.29:77,8,0	1/1:37,0:36:61.56:581,62,0	1/1:17,0:16:39.26:294,39,0	0/0:18,0:16:16.16:0,16,202	0/0:23,0:23:26.43:0,26,199	0/0:78,0:72:49.19:0,49,486	0/0:28,0:27:62.96:0,63,627	0/0:17,0:17:26.84:0,27,391	0/0:35,1:36:55.13:0,55,848	0/0:19,0:18:26.47:0,26,196	0/1:36,0:34:26.01:26,0,496	0/0:24,0:24:32.96:0,33,257	0/1:11,0:11:2.71:3,0,65
chr10	54362466	.	ATGTG	A	1696.83	PASS	AB=0.885;AC=33;AF=0.660;AN=50;BaseQRankSum=4.199;DP=796;FS=9.463;HRun=0;HaplotypeScore=177.7732;InbreedingCoeff=0.2834;MQ=49.76;MQ0=29;MQRankSum=-3.526;QD=2.81;ReadPosRankSum=-1.288;VQSLOD=1.1889;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:40,0:39:9.80:10,0,20	./.	./.	./.	1/1:21,1:26:3.99:131,4,0	1/1:16,5:21:6.02:93,6,0	1/1:25,2:29:11.42:147,11,0	0/0:29,0:27:1.55:0,2,4	1/1:26,10:36:12.04:181,12,0	1/1:30,6:35:14.62:195,15,0	0/1:16,5:21:13.14:84,0,13	0/1:45,1:44:14.91:15,0,447	0/0:20,0:20:18.42:0,18,255	1/1:19,5:24:3.23:48,3,0	0/1:23,9:32:0.43:128,0,0	0/1:33,0:33:11.72:33,0,12	0/1:37,0:37:34.21:106,0,34	1/1:17,0:16:3:28,3,0	1/1:13,0:15:7.53:53,8,0	0/1:10,0:23:0.07:0,0,0	1/1:53,0:67:3.86:20,4,0	0/0:27,0:26:24.05:0,24,451	0/0:17,0:17:20.92:0,21,366	0/0:37,0:38:50.72:0,51,929	1/1:11,6:16:1.40:44,1,0	1/1:34,2:35:26.12:277,26,0	1/1:13,0:22:11.80:89,12,0	1/1:5,6:11:11.10:170,11,0
chr10	54362618	.	C	CGATGGT	4507.71	PASS	AB=1.000;AC=23;AF=0.460;AN=50;BaseQRankSum=-5.269;DP=725;FS=3.170;HRun=0;HaplotypeScore=171.5826;InbreedingCoeff=0.6940;MQ=67.07;MQ0=5;MQRankSum=-5.470;QD=12.38;ReadPosRankSum=-5.452;VQSLOD=2.5883;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:38:0:0,0,0	0/0:6,0:14:6.02:0,6,84	./.	./.	./.	1/1:17,8:25:30.10:605,30,0	1/1:33,0:33:15.04:265,15,0	0/1:16,0:16:0:0,0,0	1/1:27,3:31:12.04:316,12,0	1/1:27,3:31:21.07:599,21,0	1/1:20,2:22:0.47:1,0,0	0/0:31,0:31:45.12:0,45,804	0/0:26,0:26:30.10:0,30,577	1/1:27,10:37:30.10:893,30,0	1/1:23,13:37:33.11:875,33,0	0/0:14,0:30:20.96:0,21,268	0/1:26,0:26:51.99:52,0,63	0/0:7,0:11:4.26:0,4,44	0/0:16,0:19:6.02:0,6,84	0/0:18,0:23:6.02:0,6,73	0/0:29,0:37:2.42:0,2,27	0/0:19,0:18:15.05:0,15,297	0/0:13,0:13:12.04:0,12,213	0/0:28,0:28:36.12:0,36,712	1/1:21,8:29:24.08:522,24,0	1/1:28,5:34:18.03:332,18,0	0/0:13,0:24:21.07:0,21,288	1/1:4,0:4:3.01:49,3,0
chr10	54363808	.	C	CA	3176.12	PASS	AB=0.600;AC=17;AF=0.304;AN=56;BaseQRankSum=-3.856;DP=625;FS=28.688;HRun=0;HaplotypeScore=101.2283;InbreedingCoeff=0.9000;MQ=59.02;MQ0=19;MQRankSum=-1.210;QD=19.61;ReadPosRankSum=3.514;VQSLOD=2.6628;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,14:22:29.77:423,30,0	1/1:0,7:9:24.05:320,24,0	0/0:44,0:17:51.16:0,51,681	0/0:36,0:16:48.02:0,48,611	0/0:18,0:18:39.06:0,39,519	0/0:24,0:24:57.18:0,57,777	0/0:25,0:25:45.62:0,46,616	0/0:25,0:23:60.60:0,61,751	0/0:22,0:22:44.22:0,44,620	0/0:32,0:31:79.90:0,80,896	0/0:21,0:21:29.80:0,30,391	0/0:21,0:21:51.62:0,52,693	0/0:31,0:31:85.59:0,86,1186	0/0:15,0:15:27.07:0,27,356	0/0:23,0:23:36.06:0,36,447	1/1:1,7:18:29.67:394,30,0	1/1:1,20:20:18.38:256,18,0	0/1:2,10:14:17.52:245,0,18	1/1:3,11:14:29.55:472,30,0	1/1:5,12:15:9.03:144,9,0	1/1:2,22:23:43.70:675,44,0	0/0:19,0:22:51.15:0,51,693	0/0:21,0:21:45.58:0,46,576	0/0:27,0:29:72.18:0,72,948	0/0:20,0:20:23.96:0,24,271	0/0:21,0:24:64.88:0,65,756	1/1:2,13:17:33.06:454,33,0	0/0:8,0:8:12.03:0,12,147
chr10	54363852	.	G	GTGTGTGTA	3988.04	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-3.434;DP=613;FS=17.090;HRun=0;HaplotypeScore=156.3854;InbreedingCoeff=0.9279;MQ=65.67;MQ0=11;MQRankSum=-3.212;QD=15.52;ReadPosRankSum=-3.201;VQSLOD=1.3958;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:65.84:0,66,531	0/0:11,0:11:32.96:0,33,347	0/0:23,0:16:41.18:0,41,413	0/0:27,0:25:57.76:0,58,576	1/1:5,9:19:6.02:207,6,0	1/1:18,0:18:41.93:345,42,0	1/1:7,0:25:12.42:111,12,0	1/1:27,0:27:74.72:672,75,0	1/1:3,14:26:9.03:318,9,0	1/1:27,0:27:68.53:917,69,0	1/1:15,0:15:21.46:217,21,0	0/0:19,0:19:51.02:0,51,809	0/0:25,0:25:33.16:0,33,962	1/1:6,8:15:9.01:219,9,0	1/1:9,16:32:5.37:208,5,0	0/0:24,0:24:45.39:0,45,511	0/0:19,0:15:29.69:0,30,270	0/0:12,0:11:24.45:0,24,348	0/0:22,0:21:52.77:0,53,571	0/0:22,0:20:47.37:0,47,527	0/0:25,0:23:50.62:0,51,686	0/0:22,0:22:44.88:0,45,561	0/0:25,0:25:68.95:0,69,896	0/0:32,0:31:45.67:0,46,1004	1/1:8,1:27:12.04:360,12,0	1/1:17,0:16:25.01:338,25,0	0/0:19,0:19:50.53:0,51,573	1/1:0,0:7:6.02:75,6,0
chr10	54364542	.	G	GACAC	5835.14	PASS	AB=0.756;AC=27;AF=0.482;AN=56;BaseQRankSum=-3.946;DP=668;FS=5.653;HRun=0;HaplotypeScore=234.9062;InbreedingCoeff=0.5214;MQ=48.03;MQ0=16;MQRankSum=2.516;QD=14.77;ReadPosRankSum=-1.143;VQSLOD=3.8093;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:19:11.05:0,11,110	0/0:4,0:9:13.83:0,14,117	0/0:29,0:11:5:0,5,30	0/0:34,0:20:2.79:0,3,85	0/1:11,6:20:24.37:269,0,24	1/1:14,4:18:24.54:429,25,0	1/1:30,8:41:21.11:758,21,0	1/1:20,0:18:14.63:143,15,0	1/1:14,4:20:20.03:321,20,0	1/1:25,5:29:35.48:556,35,0	1/1:11,4:16:17.79:325,18,0	0/0:26,0:27:50.37:0,50,631	0/0:21,0:22:41.86:0,42,493	1/1:22,4:26:33.56:647,34,0	1/1:11,11:26:23.21:394,23,0	0/0:6,0:9:6.01:0,6,55	0/0:19,0:22:0.65:0,1,181	0/0:10,0:11:17.98:0,18,167	1/1:16,0:17:11.42:79,11,0	0/1:12,0:19:22.63:23,0,52	0/1:51,1:58:99:263,0,308	0/0:23,0:28:41.15:0,41,519	0/0:16,0:20:29.90:0,30,414	0/0:35,0:39:65.98:0,66,956	1/1:19,7:28:48.91:841,49,0	0/1:15,6:22:19.24:595,0,19	0/1:9,0:16:48.51:49,0,82	1/1:5,4:9:6.02:143,6,0
chr10	54369404	.	A	AC	1296.70	PASS	AB=0.980;AC=16;AF=0.286;AN=56;BaseQRankSum=8.293;DP=595;FS=57.240;HRun=0;HaplotypeScore=150.3380;InbreedingCoeff=-0.2627;MQ=57.57;MQ0=5;MQRankSum=-6.519;QD=4.37;ReadPosRankSum=-4.299;VQSLOD=0.4187;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,2:31:21.86:0,22,398	0/0:10,0:9:20.98:0,21,240	0/0:27,0:15:7.77:0,8,485	0/0:27,0:17:45.10:0,45,523	0/1:17,2:19:12.49:12,0,146	0/0:20,0:20:3.89:0,4,321	0/1:22,0:21:99:190,0,213	0/1:18,0:15:96.07:96,0,379	0/1:24,0:23:99:125,0,298	0/1:18,1:19:99:172,0,316	0/1:15,0:15:53.52:54,0,176	0/0:19,0:19:54.18:0,54,744	0/0:10,0:16:12.57:0,13,143	0/1:18,2:19:99:100,0,245	0/1:20,0:19:55.03:55,0,176	0/1:26,0:25:89.45:89,0,347	0/1:26,0:26:99:104,0,419	0/0:23,0:23:15.41:0,15,552	0/1:23,0:24:86.68:87,0,487	0/0:10,0:10:15.37:0,15,121	0/0:32,7:40:59.64:0,60,614	0/0:18,0:20:54.13:0,54,686	0/0:14,0:19:42.07:0,42,535	0/0:28,0:33:78.18:0,78,997	0/1:18,0:17:39.21:39,0,227	0/1:19,0:16:99:117,0,396	0/1:18,0:18:96.63:97,0,321	1/1:9,0:9:8.33:120,8,0
chr10	54369929	.	T	TG	5820.73	PASS	AB=1.000;AC=43;AF=0.768;AN=56;BaseQRankSum=-4.929;DP=419;FS=14.824;HRun=7;HaplotypeScore=55.7765;InbreedingCoeff=0.8545;MQ=76.73;MQ0=0;MQRankSum=-2.031;QD=18.19;ReadPosRankSum=1.770;VQSLOD=3.3253;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,9:14:27.08:326,27,0	1/1:1,6:7:12.51:145,13,0	0/0:17,0:16:26.19:0,26,242	0/1:11,0:11:0.20:0,0,111	1/1:1,12:13:24.07:290,24,0	1/1:3,11:14:37.35:433,37,0	1/1:4,30:34:57.14:672,57,0	1/1:6,12:18:10.14:400,10,0	1/1:0,9:9:15.05:181,15,0	1/1:2,6:8:9.03:109,9,0	1/1:0,15:15:27.08:323,27,0	0/0:20,0:20:15.72:0,16,242	0/0:18,0:18:39.61:0,40,346	1/1:2,13:15:20.85:251,21,0	1/1:1,13:14:18.06:217,18,0	1/1:2,17:19:28.36:330,28,0	1/1:6,13:19:44.28:498,44,0	1/1:3,21:24:51.16:616,51,0	1/1:2,1:5:5.85:36,6,0	1/1:1,0:4:5.75:29,6,0	1/1:13,1:38:45.93:233,46,0	0/0:10,0:10:30.05:0,30,290	0/0:15,0:15:23.54:0,24,231	0/0:19,0:19:51.50:0,52,483	1/1:6,7:13:24.03:272,24,0	1/1:5,6:11:25.26:266,25,0	1/1:6,0:6:4.51:13,5,0	1/1:0,9:9:15.05:181,15,0
chr10	54377898	.	T	TAG	12746.47	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-13.909;DP=684;FS=2.517;HRun=0;HaplotypeScore=83.6250;InbreedingCoeff=0.9954;MQ=75.78;MQ0=1;MQRankSum=-3.015;QD=30.13;ReadPosRankSum=0.441;VQSLOD=6.4661;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:16,36:52:62.19:1524,62,0	1/1:3,11:14:30.10:492,30,0	0/0:24,0:23:45.92:0,46,491	0/0:30,0:29:31.34:0,31,499	1/1:12,10:22:24.08:394,24,0	1/1:4,21:25:42.14:689,42,0	1/1:5,25:30:63.22:1034,63,0	1/1:12,17:30:54.17:844,54,0	1/1:6,16:23:16.98:796,17,0	1/1:8,9:17:21.05:318,21,0	1/1:4,7:11:21.07:340,21,0	0/0:31,0:31:72.22:0,72,881	0/0:20,0:20:42.10:0,42,504	1/1:8,25:32:29.04:995,29,0	1/1:9,28:37:75.26:1229,75,0	1/1:5,20:25:48.16:787,48,0	1/1:2,16:18:42.14:689,42,0	1/1:1,19:20:51.13:807,51,0	0/0:17,0:17:36.11:0,36,445	0/0:10,0:10:18.05:0,18,211	0/0:32,0:32:57.18:0,57,706	0/0:15,0:15:27.08:0,27,335	0/0:23,0:23:51.16:0,51,631	0/0:34,0:34:90.21:0,90,1083	1/1:5,12:17:30.10:492,30,0	1/1:14,16:30:48.16:776,48,0	0/0:22,0:22:63.03:0,63,757	1/1:3,12:19:33.11:541,33,0
chr10	54378456	.	GGT	G	18325.80	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=9.625;DP=885;FS=0.316;HRun=0;HaplotypeScore=126.4391;InbreedingCoeff=0.9990;MQ=72.87;MQ0=6;MQRankSum=-3.469;QD=28.50;ReadPosRankSum=1.060;VQSLOD=6.1001;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,49:56:99:1701,140,0	1/1:4,10:14:26.85:332,27,0	0/0:31,0:23:40.48:0,40,540	0/0:51,0:42:74.86:0,75,1133	1/1:9,17:27:50.99:605,51,0	1/1:3,20:22:54.17:665,54,0	1/1:5,34:39:87.27:1069,87,0	1/1:8,17:26:50.09:576,50,0	1/1:6,32:38:96.30:1182,96,0	1/1:3,30:33:87.23:1032,87,0	1/1:9,9:18:24.07:295,24,0	0/0:32,0:32:81.28:0,81,1313	0/0:36,0:36:93.32:0,93,1502	1/1:5,27:32:81.25:997,81,0	1/1:6,36:42:93.29:1145,93,0	1/1:6,34:40:99:1219,99,0	1/1:6,22:28:57.18:701,57,0	1/1:3,28:31:81.25:997,81,0	1/1:9,16:25:45.10:536,45,0	1/1:2,27:29:81.25:997,81,0	1/1:5,43:47:99:1441,117,0	0/0:26,0:26:56.89:0,57,927	0/0:30,0:30:69.24:0,69,1115	0/0:36,0:36:99:0,99,1614	1/1:3,24:26:72.23:886,72,0	1/1:6,23:29:69.22:849,69,0	1/1:2,25:27:66.21:813,66,0	1/1:3,8:11:24.07:288,24,0
chr10	54379096	.	CCA	C	1658.89	PASS	AB=1.000;AC=25;AF=0.446;AN=56;BaseQRankSum=9.581;DP=559;FS=1.030;HRun=0;HaplotypeScore=114.9223;InbreedingCoeff=0.8773;MQ=61.05;MQ0=40;MQRankSum=-5.320;QD=6.97;ReadPosRankSum=0.499;VQSLOD=3.1697;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:48.11:0,48,595	0/0:7,0:7:21.04:0,21,255	0/0:62,0:10:9.01:0,9,213	0/1:79,0:9:3.43:3,0,39	1/1:13,0:13:11.92:91,12,0	1/1:13,0:13:5.98:48,6,0	1/1:14,0:14:11.67:94,12,0	1/1:24,0:24:47.71:362,48,0	1/1:14,0:14:23.85:185,24,0	1/1:0,8:8:8.96:70,9,0	1/1:3,1:4:2.98:21,3,0	0/0:25,0:25:63.13:0,63,766	0/0:10,0:10:26.91:0,27,303	1/1:15,0:15:20.93:166,21,0	1/1:18,2:20:29.94:256,30,0	0/0:21,0:21:57.13:0,57,800	0/0:30,0:29:66.18:0,66,830	0/0:20,0:20:56.98:0,57,702	0/0:21,0:21:51.06:0,51,692	0/0:13,0:13:29.97:0,30,385	0/0:30,0:30:56.95:0,57,815	0/0:9,0:9:24.06:0,24,292	0/0:11,0:11:18.06:0,18,262	0/0:27,0:26:55.22:0,55,719	1/1:7,0:7:11.96:97,12,0	1/1:15,0:15:41.57:309,42,0	0/0:14,0:14:35.98:0,36,434	1/1:5,6:11:20.97:173,21,0
chr10	54379103	.	CACG	C	1361.87	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=11.082;DP=548;FS=9.894;HRun=0;HaplotypeScore=119.6970;InbreedingCoeff=0.8247;MQ=54.17;MQ0=45;MQRankSum=-6.270;QD=9.80;ReadPosRankSum=0.217;VQSLOD=2.6945;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:24:56.18:0,56,915	0/0:8,0:8:23.08:0,23,339	0/0:59,0:7:20.93:0,21,324	0/0:76,0:5:8.23:0,8,99	1/1:8,4:12:14.42:122,14,0	1/1:9,1:10:2.09:105,2,0	1/1:12,0:11:21.53:132,22,0	1/1:19,0:19:7.75:94,8,0	1/1:9,3:12:33.36:263,33,0	0/1:9,0:9:8.80:30,0,9	1/1:3,1:4:2.84:9,3,0	0/0:25,0:25:63.19:0,63,1036	0/0:14,0:14:29.51:0,30,446	1/1:10,2:12:16.78:106,17,0	1/1:13,3:16:36.07:234,36,0	0/0:22,0:22:60.45:0,60,1100	0/0:28,0:26:70.77:0,71,1231	0/0:23,0:23:64.52:0,65,1012	0/0:21,0:20:60.17:0,60,1104	0/0:13,0:13:30.06:0,30,550	0/0:30,0:29:56.81:0,57,1173	0/0:11,0:11:24.08:0,24,360	0/0:14,0:14:18.06:0,18,353	0/0:27,0:27:56.27:0,56,987	1/1:3,3:6:13.27:90,13,0	1/1:11,5:16:3.08:206,3,0	0/0:13,0:13:36.07:0,36,678	1/1:7,4:11:19.89:177,20,0
chr10	54379105	.	CGTGT	C	3395.54	PASS	AB=0.707;AC=45;AF=0.938;AN=48;BaseQRankSum=-0.416;DP=545;FS=14.309;HRun=0;HaplotypeScore=117.8055;InbreedingCoeff=0.1157;MQ=51.24;MQ0=48;MQRankSum=-1.462;QD=9.15;ReadPosRankSum=0.687;VQSLOD=1.9933;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,5:23:1.10:302,1,0	1/1:5,3:8:12.04:185,12,0	./.	./.	1/1:13,0:13:3:28,3,0	1/1:9,0:9:3:28,3,0	0/0:13,0:12:2.74:0,3,12	./.	1/1:12,0:12:9.01:84,9,0	./.	1/1:5,0:5:2.74:12,3,0	1/1:15,9:24:27.04:390,27,0	1/1:6,7:14:15.04:213,15,0	1/1:13,0:13:2.95:27,3,0	1/1:16,0:16:6.01:56,6,0	1/1:14,5:20:2.10:172,2,0	1/1:22,5:25:21:296,21,0	1/1:15,8:24:33.09:488,33,0	1/1:18,0:20:9.01:84,9,0	1/1:8,0:12:6.01:56,6,0	1/1:27,0:28:0.47:1,0,0	1/1:3,7:10:15.03:232,15,0	1/1:9,4:13:3.01:46,3,0	0/1:17,12:28:18.30:344,0,18	1/1:8,0:8:3:28,3,0	1/1:14,1:15:18.03:185,18,0	1/1:11,0:12:3:28,3,0	1/1:11,0:11:12.01:112,12,0
chr10	54379107	.	TGTGTGTGTGTG	T	1574.40	PASS	AB=0.873;AC=14;AF=0.250;AN=56;BaseQRankSum=7.879;DP=533;FS=4.960;HRun=0;HaplotypeScore=165.8374;InbreedingCoeff=-0.0952;MQ=49.92;MQ0=48;MQRankSum=-6.695;QD=7.87;ReadPosRankSum=1.447;VQSLOD=1.8466;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:24:51.17:0,51,1131	0/0:7,0:7:21.07:0,21,464	0/1:54,0:3:12.53:13,0,55	0/0:76,0:5:6.01:0,6,64	0/1:9,0:13:60.04:60,0,66	0/1:8,1:9:19.44:82,0,19	0/0:12,0:11:9.98:0,10,39	0/0:19,0:19:37.31:0,37,189	0/1:8,2:11:5.53:247,0,6	0/0:10,0:9:8.93:0,9,48	0/1:4,1:5:2.67:56,0,3	0/0:22,0:22:54.16:0,54,1103	0/0:14,0:14:30.10:0,30,581	0/1:12,2:13:24.74:114,0,25	0/1:11,2:14:10.69:170,0,11	0/0:20,0:20:52.39:0,52,1017	0/0:26,0:24:63.17:0,63,1219	0/0:24,0:24:65.09:0,65,1548	0/1:20,0:19:54.08:54,0,491	0/1:12,0:12:55.13:55,0,244	0/0:27,0:26:40.17:0,40,535	0/0:10,0:10:21.06:0,21,535	0/0:13,0:13:15.05:0,15,293	0/0:28,0:27:57:0,57,1239	0/1:5,3:8:5.36:102,0,5	0/1:11,4:16:99:410,0,157	0/1:12,0:11:10.85:11,0,332	1/1:7,4:11:0.64:353,1,0
chr10	54379198	.	A	AAGTGTG	1905.46	PASS	AB=0.977;AC=12;AF=0.214;AN=56;BaseQRankSum=2.881;DP=497;FS=1.316;HRun=0;HaplotypeScore=150.3539;InbreedingCoeff=-0.1395;MQ=50.16;MQ0=8;MQRankSum=-2.893;QD=10.41;ReadPosRankSum=-2.091;VQSLOD=2.4850;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:25.31:0,25,141	0/0:9,0:9:19.97:0,20,162	0/0:9,0:1:2.99:0,3,24	0/0:12,0:4:5.65:0,6,29	0/1:19,0:19:84.42:84,0,103	0/1:13,0:13:29.90:170,0,30	0/1:15,0:15:99:229,0,142	0/0:28,0:28:62.33:0,62,543	0/1:20,0:20:63.81:237,0,64	0/1:14,2:18:99:148,0,169	0/1:18,0:17:75.32:75,0,93	0/0:24,0:23:57.13:0,57,1082	0/0:8,0:8:15.02:0,15,255	0/1:13,0:13:19.18:73,0,19	0/1:21,0:21:99:308,0,159	0/0:13,0:13:31.43:0,31,324	0/0:18,0:18:35.36:0,35,200	0/0:26,0:26:64.21:0,64,699	0/0:26,0:27:65.66:0,66,739	0/0:27,0:28:60:0,60,849	0/0:11,0:12:23.73:0,24,184	0/0:12,0:12:32.67:0,33,500	0/0:25,0:25:57.44:0,57,975	0/0:20,0:20:42.04:0,42,609	0/1:21,0:20:81.67:661,0,82	0/1:21,0:21:49.85:50,0,323	0/0:23,0:24:57.06:0,57,770	1/1:2,0:2:2.96:19,3,0
chr10	54379817	.	C	CT	2345.48	PASS	AB=0.647;AC=9;AF=0.161;AN=56;BaseQRankSum=-11.397;DP=571;FS=20.289;HRun=10;HaplotypeScore=94.0915;InbreedingCoeff=0.8239;MQ=68.94;MQ0=1;MQRankSum=-0.519;QD=20.57;ReadPosRankSum=1.224;VQSLOD=2.7245;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,35:41:68.01:919,68,0	0/1:5,6:11:25.23:168,0,25	0/0:15,0:16:19.35:0,19,171	0/0:12,0:10:11.96:0,12,94	0/0:29,0:29:67.64:0,68,620	0/0:21,0:21:56.91:0,57,465	0/0:18,0:18:47.90:0,48,393	0/0:30,0:30:54.80:0,55,444	0/0:22,0:22:60.40:0,60,493	0/0:24,0:24:53.87:0,54,442	0/0:17,0:17:38.88:0,39,320	0/0:21,0:21:44.92:0,45,369	0/0:22,0:22:53.88:0,54,438	0/0:17,0:17:40.99:0,41,325	0/0:26,0:26:65.44:0,65,509	1/1:3,10:13:5.41:254,5,0	1/1:4,20:24:60.14:633,60,0	1/1:4,21:25:40.93:531,41,0	0/0:17,0:17:44.91:0,45,365	0/0:23,0:23:59.89:0,60,484	0/0:9,0:9:20.97:0,21,172	0/0:11,0:11:20.96:0,21,172	0/0:11,0:11:26.97:0,27,222	0/0:24,1:25:36.79:0,37,496	0/0:28,0:28:55.01:0,55,503	0/0:15,0:15:35.95:0,36,295	0/0:31,0:30:83.89:0,84,689	0/0:11,0:11:23.92:0,24,192
chr10	54379997	.	G	GC	660.30	PASS	AB=0.771;AC=15;AF=0.268;AN=56;BaseQRankSum=8.051;DP=378;FS=3.604;HRun=7;HaplotypeScore=52.1223;InbreedingCoeff=0.4766;MQ=63.24;MQ0=4;MQRankSum=-2.597;QD=6.35;ReadPosRankSum=-2.965;VQSLOD=-0.5703;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:81.10:0,81,774	0/0:10,0:10:30.05:0,30,290	0/0:16,0:9:27.04:0,27,260	0/0:14,0:9:14.63:0,15,191	0/1:4,5:9:6.23:62,0,6	0/1:13,2:15:17.82:45,0,18	0/1:5,15:20:14.65:327,0,15	0/0:11,0:11:3.35:0,3,17	1/1:7,2:9:9.01:96,9,0	0/1:6,4:10:4.08:48,0,4	0/1:3,1:4:0:0,0,0	0/0:14,0:14:33.04:0,33,319	0/0:16,0:16:45.07:0,45,434	1/1:5,0:5:3.89:37,4,0	1/1:7,4:11:9.97:108,10,0	0/0:15,0:15:42.05:0,42,400	0/0:22,0:22:60.07:0,60,572	0/0:20,0:20:45.07:0,45,435	0/0:14,0:14:42.07:0,42,405	0/0:18,0:18:45.06:0,45,429	0/0:18,0:18:45.07:0,45,435	0/0:10,0:10:30.05:0,30,290	0/0:10,0:10:30.05:0,30,290	0/0:14,0:14:39.01:0,39,367	0/1:6,1:7:0:1,0,0	0/1:9,1:10:3.17:47,0,3	0/0:22,0:21:57.08:0,57,545	1/1:4,0:3:5.98:46,6,0
chr10	54380240	.	GC	G	13226.46	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=9.423;DP=791;FS=7.327;HRun=8;HaplotypeScore=80.3203;InbreedingCoeff=0.9960;MQ=75.44;MQ0=8;MQRankSum=-5.709;QD=23.37;ReadPosRankSum=3.980;VQSLOD=5.4529;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:9,54:62:99:1476,153,0	1/1:0,9:8:21.03:203,21,0	0/0:34,0:29:60.75:0,61,796	0/0:32,0:31:42.84:0,43,615	1/1:5,25:29:74.79:705,75,0	1/1:4,17:21:51.08:492,51,0	1/1:4,25:29:75.12:724,75,0	1/1:2,29:29:75.10:718,75,0	1/1:3,20:23:56.76:532,57,0	1/1:4,29:32:84.13:811,84,0	1/1:4,4:8:15.02:144,15,0	0/0:50,0:50:99:0,138,1653	0/0:37,0:37:99:0,108,1284	1/1:4,26:28:35.87:630,36,0	1/1:2,27:27:75.12:724,75,0	1/1:8,35:41:98.82:938,99,0	1/1:4,28:32:75.12:724,75,0	1/1:3,9:12:27.04:261,27,0	1/1:2,10:12:32.71:295,33,0	1/1:0,17:17:51.08:493,51,0	1/1:4,41:45:99:1042,108,0	0/0:17,0:17:48.15:0,48,579	0/0:22,0:22:57.15:0,57,666	0/0:33,0:33:84.26:0,84,1011	1/1:4,14:17:44.42:399,44,0	1/1:4,30:32:80.77:757,81,0	1/1:2,33:33:90.14:869,90,0	1/1:2,10:12:30.04:290,30,0
chr10	54380811	.	AT	A	8064.77	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=19.347;DP=780;FS=3.627;HRun=8;HaplotypeScore=95.3672;InbreedingCoeff=0.9687;MQ=73.31;MQ0=0;MQRankSum=0.531;QD=23.72;ReadPosRankSum=0.319;VQSLOD=5.0420;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:96.17:0,96,1094	0/0:8,0:8:18.06:0,18,217	0/0:19,0:17:37.86:0,38,441	0/0:12,1:13:4.04:0,4,290	1/1:3,25:28:66.05:628,66,0	1/1:1,21:22:54.09:522,54,0	1/1:1,30:31:81.13:782,81,0	1/1:9,35:44:99:997,105,0	1/1:4,25:29:72.11:695,72,0	1/1:4,33:37:99:943,99,0	1/1:4,20:24:60.09:579,60,0	0/0:38,0:38:99:0,108,1305	0/0:40,0:40:99:0,99,1172	1/1:0,30:30:75.12:724,75,0	1/1:3,29:32:75.12:724,75,0	0/0:22,1:23:34.21:0,34,692	0/0:37,0:37:99:0,108,1289	0/0:38,0:38:99:0,105,1268	0/0:22,0:22:54.17:0,54,652	0/0:32,0:32:75.22:0,75,894	0/0:23,2:25:8.23:0,8,655	0/0:35,0:35:99:0,99,1196	0/0:29,0:29:78.24:0,78,941	0/0:26,0:26:69.21:0,69,833	1/1:1,26:27:63.10:608,63,0	1/1:5,20:25:60.07:572,60,0	0/0:19,0:19:54.15:0,54,640	1/1:1,10:11:30.05:290,30,0
chr10	54384581	.	G	GGCCCATGCC	9997.84	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=0.358;DP=727;FS=5.622;HRun=0;HaplotypeScore=197.4052;InbreedingCoeff=0.9838;MQ=90.85;MQ0=0;MQRankSum=-11.988;QD=102.02;ReadPosRankSum=-3.379;VQSLOD=4.1023;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,138,4364	0/0:17,0:17:48.12:0,48,1452	0/0:33,0:32:92.07:0,92,2563	0/0:29,0:29:72.17:0,72,1979	0/0:21,0:21:62.43:0,62,1868	0/0:20,0:20:60.18:0,60,1810	0/0:28,0:28:81.25:0,81,2387	0/0:35,0:35:99:0,99,2926	0/0:27,0:27:81.28:0,81,2555	0/0:27,0:27:81.28:0,81,2524	0/0:19,0:19:57.19:0,57,1777	0/0:47,0:47:99:0,141,4172	0/0:28,0:28:84.25:0,84,2508	0/0:23,0:23:69.24:0,69,2091	0/0:23,0:23:66.21:0,66,1944	0/0:31,0:31:93.31:0,93,2828	0/0:28,0:27:81.28:0,81,2579	0/0:29,0:29:84.29:0,84,2740	1/1:5,5:15:39.13:1611,39,0	1/1:2,12:17:45.11:1981,45,0	1/1:14,22:40:81.28:3480,81,0	0/0:24,0:24:72.25:0,72,2348	0/0:10,0:10:30.10:0,30,927	0/0:35,0:35:99:0,105,3212	0/0:21,0:21:63.18:0,63,1802	0/0:24,0:24:69.23:0,69,2135	1/1:5,16:26:60.05:2927,60,0	0/0:3,0:3:9.03:0,9,200
chr10	54386272	.	G	GGGA	32265.41	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=-15.999;DP=859;FS=8.497;HRun=0;HaplotypeScore=112.0031;InbreedingCoeff=0.9802;MQ=77.31;MQ0=0;MQRankSum=-6.606;QD=49.64;ReadPosRankSum=-0.409;VQSLOD=6.8824;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,39:48:99:2154,99,0	1/1:2,7:9:21.07:449,21,0	0/0:22,0:22:45.15:0,45,704	0/0:20,0:20:49.98:0,50,750	1/1:2,27:29:71.75:1549,72,0	1/1:4,22:26:63.22:1390,63,0	1/1:3,36:41:99:2185,99,0	1/1:5,22:29:75.24:1482,75,0	1/1:4,30:35:87.30:1895,87,0	1/1:5,31:37:96.31:2059,96,0	1/1:2,11:14:27.56:590,28,0	0/0:47,0:47:99:0,138,2158	0/0:36,0:36:99:0,99,1537	1/1:4,28:34:72.25:1578,72,0	1/1:7,35:42:96.33:2097,96,0	1/1:4,29:33:84.29:1853,84,0	1/1:7,39:47:99:2515,114,0	1/1:5,20:25:51.18:1116,51,0	1/1:6,12:20:42.09:808,42,0	1/1:3,22:25:57.18:1182,57,0	1/1:7,48:57:99:2671,124,0	0/0:27,0:27:72.22:0,72,1108	0/0:19,0:19:48.16:0,48,763	0/0:38,0:38:99:0,102,1639	1/1:8,28:38:72.24:1549,72,0	1/1:3,27:31:84.26:1754,84,0	1/1:3,24:26:57.20:1257,57,0	1/1:0,2:2:6.02:132,6,0
chr10	54390114	.	A	AAAC	5507.88	PASS	AB=0.992;AC=37;AF=0.661;AN=56;BaseQRankSum=2.912;DP=506;FS=0.000;HRun=0;HaplotypeScore=170.6838;InbreedingCoeff=0.4391;MQ=59.51;MQ0=7;MQRankSum=-3.689;QD=14.01;ReadPosRankSum=4.632;VQSLOD=4.0487;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:24:15.87:206,0,16	0/1:9,0:9:11.68:85,0,12	0/1:29,0:16:1.13:1,0,109	0/0:19,0:13:15.50:0,15,152	1/1:14,1:15:22.75:266,23,0	1/1:14,6:20:53.32:705,53,0	1/1:8,1:7:0.75:84,1,0	0/1:34,0:31:18.44:268,0,18	1/1:14,1:15:34.58:364,35,0	1/1:18,4:21:16.08:481,16,0	1/1:20,0:20:11.87:356,12,0	0/0:20,0:20:43.10:0,43,643	0/0:23,0:23:55.73:0,56,617	1/1:16,0:16:35.34:369,35,0	0/1:15,1:15:6.38:187,0,6	1/1:11,0:10:22.88:194,23,0	1/1:19,0:19:23.30:193,23,0	0/1:26,0:25:38.50:224,0,39	1/1:25,0:23:18.83:246,19,0	0/1:10,0:10:6.52:111,0,7	1/1:6,0:6:0.99:11,1,0	0/0:12,0:12:30.05:0,30,410	0/0:20,0:18:48.65:0,49,524	0/0:18,0:18:49.22:0,49,594	1/1:14,2:16:13.19:415,13,0	1/1:12,1:13:12.06:235,12,0	1/1:21,0:21:19.48:206,19,0	1/1:17,0:15:26.09:302,26,0
chr10	54390115	.	A	AAC	4197.07	PASS	AB=0.970;AC=28;AF=0.500;AN=56;BaseQRankSum=2.241;DP=509;FS=12.229;HRun=0;HaplotypeScore=152.4722;InbreedingCoeff=-0.0496;MQ=57.57;MQ0=7;MQRankSum=-1.527;QD=11.41;ReadPosRankSum=5.414;VQSLOD=2.5630;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:24:9.42:392,0,9	0/1:9,0:9:30.27:161,0,30	0/0:29,0:15:0.55:0,1,122	0/0:21,0:13:16.12:0,16,158	1/1:14,0:14:4.59:83,5,0	0/1:19,1:20:6.37:332,0,6	0/1:9,0:7:9.68:52,0,10	0/1:33,0:30:99:149,0,99	0/1:14,0:14:6.89:170,0,7	0/1:23,1:23:91.96:254,0,92	0/1:18,1:19:32.20:200,0,32	0/0:20,0:20:46.79:0,47,621	0/0:22,0:22:56.87:0,57,589	1/1:14,1:16:2.87:229,3,0	0/1:16,0:15:36.48:36,0,72	1/1:11,1:11:22.63:271,23,0	1/1:20,0:20:14.07:259,14,0	1/1:28,0:27:12.78:426,13,0	1/1:26,0:23:6.51:308,7,0	0/1:10,0:10:13.35:122,0,13	0/1:6,0:6:4.33:34,0,4	0/0:12,0:12:30.01:0,30,371	0/0:19,0:17:48.63:0,49,483	0/0:18,0:18:49.41:0,49,541	0/1:15,1:16:19.94:145,0,20	0/1:12,2:14:47.02:184,0,47	1/1:21,0:21:5.29:254,5,0	0/1:15,2:15:16.66:136,0,17
chr10	54390116	.	A	AC	3459.89	PASS	AB=0.906;AC=25;AF=0.446;AN=56;BaseQRankSum=1.320;DP=510;FS=24.305;HRun=0;HaplotypeScore=142.8449;InbreedingCoeff=-0.2284;MQ=55.48;MQ0=7;MQRankSum=-0.445;QD=9.25;ReadPosRankSum=5.651;VQSLOD=2.1854;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:14,10:24:36.12:307,0,36	0/1:6,3:9:32.88:170,0,33	0/0:26,0:12:8.86:0,9,124	0/0:21,0:13:22.41:0,22,166	0/1:17,0:17:20.06:51,0,20	0/1:20,0:20:27.94:194,0,28	0/1:9,0:7:15.56:16,0,30	0/1:29,3:29:99:106,0,185	0/1:14,0:14:23.39:102,0,23	0/1:24,0:23:99:152,0,120	0/1:16,1:17:48.57:113,0,49	0/0:20,0:20:56.81:0,57,609	0/0:21,0:21:54.38:0,54,541	0/1:16,0:16:17.21:96,0,17	0/1:16,0:15:3.81:4,0,77	1/1:8,4:11:18.84:207,19,0	1/1:16,3:19:10.27:188,10,0	0/1:22,6:27:11.69:360,0,12	1/1:16,11:24:7.15:502,7,0	0/1:5,5:10:23.81:151,0,24	0/1:2,4:6:6.68:91,0,7	0/0:11,0:11:31.31:0,31,360	0/0:19,0:17:46.89:0,47,426	0/0:18,0:18:44.23:0,44,469	0/1:18,0:18:26.48:87,0,26	0/1:18,0:18:85.23:101,0,85	1/1:11,10:21:6.34:385,6,0	0/1:17,0:15:17.94:77,0,18
chr10	54390124	.	AAACC	A	5023.70	PASS	AB=0.931;AC=33;AF=0.589;AN=56;BaseQRankSum=3.931;DP=510;FS=0.000;HRun=0;HaplotypeScore=154.4408;InbreedingCoeff=0.0814;MQ=50.44;MQ0=9;MQRankSum=-5.761;QD=11.93;ReadPosRankSum=-5.160;VQSLOD=3.1092;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:24:17.59:264,18,0	1/1:9,0:9:24.78:171,25,0	0/1:31,0:12:53.14:53,0,230	0/1:24,0:16:8.03:8,0,256	1/1:14,2:16:15.20:213,15,0	0/1:15,3:18:4.22:244,0,4	1/1:10,0:8:15.05:189,15,0	1/1:33,0:29:47.56:466,48,0	0/1:12,2:14:17.46:211,0,17	1/1:23,1:23:37.10:548,37,0	0/1:14,1:15:21.50:248,0,21	0/0:20,0:20:48.33:0,48,928	0/0:22,0:22:56.53:0,57,1022	1/1:14,1:15:25.37:331,25,0	0/1:15,2:16:14.12:231,0,14	0/1:12,0:11:12.62:125,0,13	1/1:20,0:20:15.17:203,15,0	1/1:24,0:23:13.82:317,14,0	0/1:27,0:24:61.63:145,0,62	0/1:12,0:12:21.63:131,0,22	0/1:8,0:7:6.56:49,0,7	0/0:13,0:13:39.13:0,39,731	0/0:17,0:15:44.95:0,45,668	0/0:17,0:17:44.24:0,44,894	0/1:13,4:17:14.02:319,0,14	1/1:16,1:17:19.04:304,19,0	0/1:18,0:18:36.97:37,0,134	0/1:10,6:14:16.60:216,0,17
chr10	54390125	.	AACC	A	5413.52	PASS	AB=1.000;AC=40;AF=0.714;AN=56;BaseQRankSum=6.448;DP=509;FS=2.343;HRun=0;HaplotypeScore=145.4268;InbreedingCoeff=0.4604;MQ=50.45;MQ0=10;MQRankSum=-8.034;QD=12.92;ReadPosRankSum=-4.307;VQSLOD=3.8845;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:24:40.05:367,40,0	1/1:9,0:9:26.46:215,26,0	0/1:32,0:13:59.26:59,0,203	0/1:24,0:17:3.08:3,0,257	1/1:14,1:15:20.01:199,20,0	0/1:17,0:17:7.24:193,0,7	1/1:10,0:8:16.82:175,17,0	1/1:26,7:29:57.05:517,57,0	1/1:14,0:14:17.41:217,17,0	1/1:24,0:23:65.31:573,65,0	1/1:15,0:15:6.60:243,7,0	0/0:20,0:20:47.72:0,48,795	0/0:23,0:23:56.45:0,56,911	1/1:15,0:15:37.40:336,37,0	1/1:17,0:16:12.94:214,13,0	1/1:12,0:11:9.19:126,9,0	1/1:20,0:20:33.40:268,33,0	1/1:24,0:23:37.47:398,37,0	0/1:26,0:22:26.29:203,0,26	1/1:11,1:12:4.83:149,5,0	0/1:8,0:7:12.16:60,0,12	0/0:13,0:13:39.13:0,39,632	0/0:17,0:15:44.92:0,45,559	0/0:17,0:17:43.91:0,44,741	1/1:17,0:17:8.58:255,9,0	1/1:17,0:17:37.30:376,37,0	0/1:18,0:18:45.18:72,0,45	1/1:14,2:14:6.18:199,6,0
chr10	54390126	.	ACC	A	6279.83	PASS	AB=0.906;AC=43;AF=0.768;AN=56;BaseQRankSum=10.717;DP=500;FS=0.887;HRun=2;HaplotypeScore=133.9216;InbreedingCoeff=0.7460;MQ=48.11;MQ0=10;MQRankSum=-9.172;QD=15.24;ReadPosRankSum=-1.322;VQSLOD=1.6381;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:17,7:24:51.86:469,52,0	1/1:6,2:9:26.88:284,27,0	0/1:27,2:11:37.75:38,0,197	0/1:24,1:18:1.91:2,0,310	1/1:14,1:15:20.59:179,21,0	1/1:17,0:17:19.68:226,20,0	1/1:6,5:9:17.37:177,17,0	1/1:21,12:29:58.68:580,59,0	1/1:8,5:13:27.29:260,27,0	1/1:18,5:22:67.85:629,68,0	1/1:13,1:14:28.25:255,28,0	0/0:19,0:19:51.31:0,51,696	0/0:21,0:22:54.37:0,54,762	1/1:12,2:14:38.82:375,39,0	1/1:13,4:16:28.46:252,28,0	1/1:9,3:11:21.25:178,21,0	1/1:14,5:19:33.85:321,34,0	1/1:18,6:23:45.96:466,46,0	1/1:19,6:21:13.48:251,13,0	1/1:11,0:11:23.22:203,23,0	0/1:7,2:8:7.46:74,0,7	0/0:13,0:13:39.12:0,39,550	0/0:17,0:15:44.93:0,45,523	0/0:17,0:17:43.59:0,44,625	1/1:16,1:17:29.11:262,29,0	1/1:12,5:17:47.87:413,48,0	1/1:17,0:18:19.73:178,20,0	1/1:15,0:13:17.62:208,18,0
chr10	54390132	.	AAAC	A	1418.97	PASS	AB=0.944;AC=21;AF=0.375;AN=56;BaseQRankSum=2.760;DP=521;FS=5.716;HRun=0;HaplotypeScore=160.2536;InbreedingCoeff=-0.0292;MQ=51.94;MQ0=12;MQRankSum=-3.521;QD=4.15;ReadPosRankSum=-5.461;VQSLOD=0.4860;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:23,2:25:11.21:227,11,0	0/1:4,3:7:4.43:125,0,4	0/1:32,0:14:1.47:1,0,360	0/0:24,0:19:5.48:0,5,538	0/0:16,0:16:22.11:0,22,152	0/0:19,0:19:13.78:0,14,141	0/1:12,0:10:7.94:32,0,8	0/1:36,0:31:78.52:79,0,86	0/1:15,0:15:19.06:19,0,62	0/1:26,0:24:82.74:88,0,83	0/1:15,0:15:11.44:11,0,80	0/0:19,0:19:43.61:0,44,1012	0/0:22,0:22:48.72:0,49,974	0/1:14,0:14:18.35:29,0,18	0/1:18,0:17:10.28:10,0,76	0/1:13,1:13:0.99:118,0,1	1/1:18,2:20:16.83:140,17,0	0/1:22,1:23:3.93:111,0,4	0/1:22,4:22:32.55:253,0,33	0/1:9,1:10:4.51:76,0,5	1/1:10,0:9:13.15:101,13,0	0/0:13,0:13:39.13:0,39,764	0/0:16,0:14:35.38:0,35,678	0/0:18,0:18:47.29:0,47,941	0/0:16,0:16:25.55:0,26,119	0/1:18,0:18:30.69:40,0,31	0/1:15,5:20:63.05:127,0,63	0/0:15,0:13:1.49:0,1,114
chr10	54390134	.	AC	A	3025.19	PASS	AB=0.981;AC=42;AF=0.750;AN=56;BaseQRankSum=11.111;DP=512;FS=0.838;HRun=1;HaplotypeScore=136.3938;InbreedingCoeff=0.7367;MQ=49.67;MQ0=12;MQRankSum=-9.119;QD=7.72;ReadPosRankSum=0.751;VQSLOD=0.8286;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:24:35.13:211,35,0	1/1:7,0:7:19.74:113,20,0	0/0:31,0:12:5.92:0,6,182	0/1:24,1:19:16.50:16,0,306	0/1:17,0:17:12.51:13,0,22	1/1:17,1:18:29.08:177,29,0	1/1:11,2:11:11.91:57,12,0	1/1:31,6:32:21.20:233,21,0	1/1:14,1:15:14.23:93,14,0	1/1:23,3:25:50.87:386,51,0	1/1:15,0:15:23.05:183,23,0	0/0:19,0:19:43.09:0,43,619	0/0:22,0:22:31.77:0,32,558	1/1:13,0:13:17.78:116,18,0	1/1:17,2:18:11.92:73,12,0	1/1:13,0:12:23.06:133,23,0	1/1:20,0:20:28.72:155,29,0	1/1:19,0:19:16.59:151,17,0	1/1:25,0:21:17.06:206,17,0	1/1:10,0:10:24.41:114,24,0	1/1:9,0:8:14.16:77,14,0	0/0:13,0:13:38.54:0,39,447	0/0:16,0:14:31.41:0,31,407	0/0:19,0:19:49.91:0,50,572	1/1:15,0:15:8.56:89,9,0	1/1:15,3:18:50:310,50,0	1/1:20,0:20:44.86:257,45,0	1/1:13,1:12:3.55:53,4,0
chr10	54390135	.	CA	C	2925.40	PASS	AB=0.764;AC=33;AF=0.589;AN=56;BaseQRankSum=5.972;DP=515;FS=18.830;HRun=7;HaplotypeScore=136.7857;InbreedingCoeff=0.2858;MQ=50.95;MQ0=12;MQRankSum=-8.120;QD=7.95;ReadPosRankSum=0.841;VQSLOD=0.3285;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:10,14:24:25.15:236,25,0	1/1:3,4:7:16.95:131,17,0	0/0:31,0:12:22.35:0,22,235	0/0:26,0:20:12.14:0,12,328	0/1:15,2:17:32.20:32,0,109	0/1:12,6:18:45.97:46,0,67	1/1:4,9:11:6.68:115,7,0	0/1:28,9:33:25.17:300,0,25	0/1:8,7:15:15.03:80,0,15	0/1:16,10:24:12.05:321,0,12	1/1:9,6:15:4.45:154,4,0	0/0:19,0:19:51.15:0,51,630	0/0:22,0:22:54.38:0,54,618	0/1:9,4:13:17.51:95,0,18	0/1:9,10:18:20.61:122,0,21	1/1:13,1:13:14.11:69,14,0	1/1:17,3:20:22.81:164,23,0	1/1:16,3:19:9.78:206,10,0	1/1:19,6:21:15.09:220,15,0	1/1:4,5:10:22.22:179,22,0	1/1:7,2:8:6.78:62,7,0	0/0:13,0:13:39.12:0,39,481	0/0:16,0:14:35.14:0,35,418	0/0:20,0:20:54.14:0,54,666	0/1:11,4:15:28.85:51,0,29	1/1:15,3:18:30.70:293,31,0	1/1:14,5:19:37.02:209,37,0	0/1:11,3:12:36.23:36,0,80
chr10	54390136	.	A	AAAAC	6427.98	PASS	AB=0.905;AC=31;AF=0.554;AN=56;BaseQRankSum=4.448;DP=527;FS=8.665;HRun=0;HaplotypeScore=150.8769;InbreedingCoeff=0.1595;MQ=51.04;MQ0=12;MQRankSum=-7.247;QD=16.52;ReadPosRankSum=2.758;VQSLOD=4.2399;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:20,5:26:44.16:732,44,0	1/1:7,0:7:21.05:299,21,0	0/0:31,0:12:32.64:0,33,422	0/1:26,0:20:18.77:19,0,500	0/0:9,0:17:2.60:0,3,150	0/1:19,0:19:20.82:21,0,133	1/1:12,1:12:15.15:126,15,0	0/1:37,0:33:55.43:284,0,55	0/1:13,0:15:45.45:118,0,45	0/1:26,0:25:99:274,0,113	0/1:12,0:15:73.81:204,0,74	0/0:19,0:19:50.97:0,51,936	0/0:22,0:22:57.15:0,57,990	0/1:12,0:13:26.16:61,0,26	0/1:17,1:18:20.28:111,0,20	1/1:6,3:14:20.80:320,21,0	1/1:9,2:20:10.57:446,11,0	1/1:15,2:19:16.17:517,16,0	1/1:17,5:25:39.12:872,39,0	1/1:8,2:10:27.09:515,27,0	1/1:7,2:8:7.37:183,7,0	0/0:13,0:13:39.13:0,39,738	0/0:16,0:14:39.02:0,39,658	0/0:20,0:20:54.17:0,54,954	0/1:10,0:15:59.99:130,0,60	0/1:11,0:18:29.25:234,0,29	1/1:11,7:19:46.47:826,46,0	0/1:16,0:14:63.56:136,0,64
chr10	54390142	.	AC	A	1519.45	PASS	AB=0.983;AC=24;AF=0.429;AN=56;BaseQRankSum=7.711;DP=547;FS=2.189;HRun=1;HaplotypeScore=139.1294;InbreedingCoeff=-0.2235;MQ=51.81;MQ0=11;MQRankSum=-8.735;QD=3.83;ReadPosRankSum=1.980;VQSLOD=0.5503;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:27:29.03:104,0,29	0/1:9,0:9:3.37:71,0,3	0/0:31,1:13:7.34:0,7,268	0/0:26,0:21:22.22:0,22,348	0/1:16,0:16:1.27:1,0,27	0/1:20,0:20:54.13:91,0,54	0/1:13,1:12:29.07:29,0,31	1/1:37,3:35:5.99:275,6,0	0/1:14,1:15:3.93:58,0,4	1/1:25,1:24:7.03:203,7,0	0/1:15,0:15:37.32:37,0,37	0/0:19,0:19:51.06:0,51,636	0/0:23,0:23:49.75:0,50,584	0/1:11,0:11:3.29:74,0,3	0/1:17,1:17:12.74:47,0,13	0/1:15,0:14:15.05:52,0,15	1/1:19,1:20:26.20:132,26,0	0/1:22,0:22:74.20:74,0,94	0/1:32,0:28:42.39:107,0,42	0/1:11,1:12:16.19:72,0,16	0/1:11,0:10:10.59:11,0,58	0/0:14,0:14:38.68:0,39,448	0/0:14,0:12:15.91:0,16,383	0/0:22,0:22:59.22:0,59,687	0/1:16,0:16:5.96:6,0,97	0/1:19,0:19:19.79:102,0,20	0/1:20,0:20:57.01:83,0,57	0/1:17,1:16:54.25:54,0,61
chr10	54390450	.	G	GACA	11292.90	PASS	AB=1.000;AC=43;AF=0.768;AN=56;BaseQRankSum=-6.195;DP=314;FS=0.715;HRun=0;HaplotypeScore=42.5381;InbreedingCoeff=0.8472;MQ=56.65;MQ0=0;MQRankSum=-2.215;QD=41.67;ReadPosRankSum=1.328;VQSLOD=5.4061;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,10:12:23.97:502,24,0	1/1:1,2:3:8.96:143,9,0	0/1:9,0:6:5.77:6,0,74	0/0:12,0:9:9.97:0,10,201	1/1:4,10:14:30.10:625,30,0	1/1:3,11:14:34.93:695,35,0	1/1:1,6:7:18.06:369,18,0	1/1:12,22:35:72.10:1159,72,0	1/1:1,8:11:15.05:314,15,0	1/1:1,10:11:24.08:497,24,0	1/1:0,6:6:18.02:332,18,0	0/0:5,0:5:15.05:0,15,228	0/0:5,0:5:12.04:0,12,181	1/1:1,7:8:21.07:428,21,0	1/1:0,8:8:24.08:494,24,0	1/1:1,8:9:24.08:501,24,0	1/1:1,14:15:27.09:564,27,0	1/1:6,17:22:47.08:901,47,0	1/1:7,13:23:57.09:909,57,0	1/1:0,8:8:24.08:499,24,0	1/1:0,1:1:3.01:62,3,0	0/0:6,0:6:18.05:0,18,253	0/0:9,0:9:27.09:0,27,410	0/0:6,0:5:15.05:0,15,223	1/1:0,14:15:36.12:754,36,0	1/1:1,7:9:21.07:418,21,0	1/1:4,7:11:27.09:519,27,0	1/1:7,10:17:30.10:602,30,0
chr10	54392873	.	CAG	C	4235.61	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=8.067;DP=615;FS=2.986;HRun=0;HaplotypeScore=79.1143;InbreedingCoeff=0.9997;MQ=86.09;MQ0=0;MQRankSum=-3.517;QD=36.51;ReadPosRankSum=4.275;VQSLOD=6.9592;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,35:36:87.29:1281,87,0	1/1:0,10:10:27.09:398,27,0	0/0:18,0:18:51.07:0,51,896	0/0:22,0:22:64.04:0,64,1060	0/0:23,0:23:66.21:0,66,1205	0/0:19,0:19:54.19:0,54,1011	0/0:17,0:17:45.15:0,45,835	0/0:38,0:38:99:0,108,1947	0/0:19,0:19:57.20:0,57,1060	0/0:28,0:28:81.28:0,81,1492	0/0:14,0:14:42.14:0,42,786	0/0:27,0:27:78.25:0,78,1409	0/0:23,0:23:63.20:0,63,1133	0/0:26,0:26:75.24:0,75,1365	0/0:23,0:23:69.22:0,69,1254	1/1:1,14:15:39.09:550,39,0	1/1:0,30:30:75.21:1080,75,0	1/1:0,25:25:63.09:927,63,0	0/0:17,0:17:51.13:0,51,896	0/0:23,0:23:63.22:0,63,1166	0/0:24,0:24:72.23:0,72,1301	0/0:15,0:15:45.15:0,45,830	0/0:22,0:22:63.22:0,63,1176	0/0:24,0:23:69.24:0,69,1292	0/0:23,0:23:63.22:0,63,1172	0/0:27,0:27:78.25:0,78,1400	0/0:16,0:15:48.11:0,48,842	0/0:11,0:11:33.11:0,33,617
chr10	54393959	.	GGTGT	G	694.64	PASS	AB=0.975;AC=28;AF=0.583;AN=48;BaseQRankSum=2.025;DP=835;FS=30.308;HRun=0;HaplotypeScore=128.0806;InbreedingCoeff=0.1796;MQ=42.40;MQ0=147;MQRankSum=-0.060;QD=1.35;ReadPosRankSum=-1.638;VQSLOD=0.6604;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:20:0.86:1,0,5	1/1:9,0:7:0.47:1,0,0	./.	./.	1/1:14,1:14:6.02:91,6,0	1/1:23,2:23:14.82:155,15,0	1/1:32,0:28:2.60:45,3,0	./.	1/1:19,0:14:5.84:47,6,0	1/1:36,0:20:6.01:72,6,0	./.	0/1:38,0:34:24.57:25,0,348	0/0:23,0:18:16.86:0,17,222	1/1:23,2:22:14.93:173,15,0	0/1:21,0:23:0:0,0,0	0/1:20,0:15:17.74:18,0,21	0/1:24,0:16:22.01:22,0,32	0/0:21,0:14:0.94:0,1,3	0/0:19,0:10:1.25:0,1,3	1/1:26,0:22:0.25:7,0,0	0/1:78,0:64:5.19:5,0,20	0/0:34,0:29:25.91:0,26,466	0/1:20,0:16:7.59:8,0,257	0/0:64,0:55:44.25:0,44,689	1/1:25,4:25:3.01:46,3,0	0/1:23,1:22:19.13:79,0,19	1/1:16,0:12:5.75:38,6,0	0/0:16,0:12:2.74:0,3,12
chr10	54395648	.	AGTGT	A	2084.68	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=2.337;DP=757;FS=12.215;HRun=0;HaplotypeScore=160.0394;InbreedingCoeff=0.7573;MQ=62.44;MQ0=13;MQRankSum=4.977;QD=13.36;ReadPosRankSum=3.406;VQSLOD=2.6790;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:44:5.29:0,5,101	0/0:7,0:12:5.95:0,6,70	0/0:31,0:20:3.90:0,4,43	0/0:35,0:21:3.01:0,3,71	0/0:22,0:21:12.04:0,12,211	0/0:25,0:23:6:0,6,71	0/0:39,0:38:12.35:0,12,202	0/0:31,0:31:24.08:0,24,412	0/0:32,0:32:5.51:0,6,74	0/0:25,0:23:42.14:0,42,751	1/1:20,0:18:0.25:1,0,0	1/1:19,7:27:18.05:264,18,0	1/1:16,13:29:42.12:621,42,0	0/0:28,0:28:23.91:0,24,406	0/0:32,0:32:9.50:0,9,122	0/0:22,0:24:23.98:0,24,313	0/0:16,0:20:9.50:0,10,157	0/0:25,0:25:38.81:0,39,626	0/0:18,0:17:15.05:0,15,246	0/0:20,0:19:15:0,15,186	0/0:46,0:45:15.02:0,15,203	1/1:14,7:21:21.07:330,21,0	1/1:14,13:27:30.10:471,30,0	1/1:17,15:32:35.99:566,36,0	0/0:26,0:26:12.04:0,12,200	0/0:36,0:36:60.09:0,60,988	0/0:13,0:16:22.32:0,22,375	0/0:11,0:9:8.97:0,9,92
chr10	54396567	.	C	CA	3699.57	PASS	AB=0.675;AC=16;AF=0.286;AN=56;BaseQRankSum=15.278;DP=765;FS=2.594;HRun=1;HaplotypeScore=140.6220;InbreedingCoeff=0.2593;MQ=76.96;MQ0=0;MQRankSum=-2.089;QD=11.74;ReadPosRankSum=6.593;VQSLOD=2.2338;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,125,651	0/0:10,0:10:24.15:0,24,137	0/0:44,0:39:94.41:0,94,1150	0/0:47,0:42:99:0,110,1346	0/1:11,13:24:28.96:244,0,29	1/1:7,14:21:37.34:350,37,0	0/1:22,17:39:99:340,0,122	0/1:17,9:25:86.16:182,0,86	0/1:13,14:27:45.45:309,0,45	0/1:18,18:36:57.92:444,0,58	0/1:10,10:20:51.94:214,0,52	0/0:30,0:30:81.27:0,81,1114	0/0:22,0:22:63.20:0,63,855	0/1:7,13:20:13.93:266,0,14	1/1:9,21:30:14.59:456,15,0	0/0:26,0:26:68.23:0,68,334	0/0:31,0:31:52.05:0,52,343	0/0:32,1:33:67.65:0,68,421	0/0:23,0:23:21.59:0,22,183	0/0:20,0:18:18.82:0,19,100	0/0:14,0:14:16.36:0,16,90	0/0:27,0:27:75.25:0,75,1035	0/0:27,0:27:81.27:0,81,1112	0/0:38,0:38:99:0,114,1501	1/1:8,17:25:23.84:422,24,0	0/1:19,13:31:99:238,0,127	0/0:13,0:12:11.64:0,12,72	1/1:3,12:15:3.73:234,4,0
chr10	54396568	.	C	CA	3660.24	PASS	AB=0.661;AC=15;AF=0.268;AN=56;BaseQRankSum=15.419;DP=759;FS=0.984;HRun=0;HaplotypeScore=139.9432;InbreedingCoeff=0.1772;MQ=77.51;MQ0=0;MQRankSum=-2.108;QD=11.69;ReadPosRankSum=6.326;VQSLOD=3.9016;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,106,625	0/0:10,0:10:24.82:0,25,139	0/0:42,0:38:99:0,108,1280	0/0:47,0:42:99:0,112,1370	0/1:11,13:24:15.42:267,0,15	1/1:7,14:21:40.22:374,40,0	0/1:22,17:39:99:366,0,112	0/1:17,9:25:91.77:182,0,92	0/1:13,14:27:46.93:308,0,47	0/1:17,18:35:79.81:387,0,80	0/1:10,10:20:43.96:217,0,44	0/0:29,0:29:84.27:0,84,1150	0/0:22,0:22:66.18:0,66,883	0/1:7,13:20:15.20:267,0,15	1/1:9,20:30:8.11:431,8,0	0/0:26,0:26:72.44:0,72,352	0/0:31,0:31:55.15:0,55,337	0/0:32,1:33:41.72:0,42,370	0/0:22,0:22:48.98:0,49,260	0/0:20,0:18:18.82:0,19,101	0/0:15,0:15:15.93:0,16,85	0/0:27,0:27:75.25:0,75,1047	0/0:27,0:27:81.27:0,81,1123	0/0:35,0:35:99:0,105,1445	1/1:7,17:24:20.70:396,21,0	0/1:19,13:31:99:238,0,136	0/0:13,0:12:14.65:0,15,91	0/1:3,12:15:9.95:228,0,10
chr10	54397715	.	AC	A	1968.44	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=6.700;DP=418;FS=0.530;HRun=2;HaplotypeScore=43.4709;InbreedingCoeff=0.9721;MQ=91.04;MQ0=0;MQRankSum=-2.650;QD=33.36;ReadPosRankSum=-0.006;VQSLOD=3.1155;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:57.11:0,57,807	0/0:4,0:4:12.04:0,12,180	0/0:24,0:24:72:0,72,925	0/0:18,0:18:48.04:0,48,622	0/0:9,0:9:24.08:0,24,349	0/0:19,0:19:57.18:0,57,833	0/0:19,0:19:57.16:0,57,796	0/0:20,0:20:60.20:0,60,899	0/0:16,0:16:48.04:0,48,660	0/0:13,0:13:39.13:0,39,584	0/0:7,0:7:21.07:0,21,314	0/0:19,0:19:57.18:0,57,830	0/0:18,0:18:54.13:0,54,764	0/0:14,0:14:39.13:0,39,584	0/0:11,0:11:30.10:0,30,449	0/0:14,0:14:42.14:0,42,625	0/0:23,0:23:66.21:0,66,968	0/0:22,0:22:63.17:0,63,895	1/1:0,19:19:57.14:707,57,0	1/1:0,11:11:30.04:369,30,0	1/1:0,21:21:57.19:740,57,0	0/0:11,0:11:30.03:0,30,421	0/0:13,0:13:36.09:0,36,498	0/0:25,0:25:75.22:0,75,1082	0/0:9,0:9:27.09:0,27,404	0/0:8,0:8:24.08:0,24,359	1/1:0,8:8:24.08:312,24,0	0/0:3,0:3:9.01:0,9,114
chr10	54397963	.	AT	A	14798.33	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=4.409;DP=702;FS=3.266;HRun=3;HaplotypeScore=74.1798;InbreedingCoeff=0.9995;MQ=82.85;MQ0=0;MQRankSum=-2.259;QD=34.49;ReadPosRankSum=1.842;VQSLOD=5.6229;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,48:48:99:1673,135,0	1/1:0,9:9:24.08:298,24,0	0/0:26,0:26:63.21:0,63,873	0/0:16,0:16:48.11:0,48,620	1/1:0,21:21:63.20:781,63,0	1/1:0,17:17:48.15:595,48,0	1/1:0,33:33:84.26:1041,84,0	1/1:1,29:30:87.26:1064,87,0	1/1:0,27:27:75.24:930,75,0	1/1:0,24:24:72.21:878,72,0	1/1:0,14:14:33.10:409,33,0	0/0:33,0:33:93.30:0,93,1321	0/0:26,0:26:72.24:0,72,1032	1/1:0,27:27:75.24:929,75,0	1/1:0,41:41:99:1451,117,0	1/1:0,29:29:78.25:967,78,0	1/1:0,28:28:78.25:967,78,0	1/1:0,29:29:84.26:1041,84,0	0/0:24,0:24:69.21:0,69,959	0/0:18,0:18:51.15:0,51,701	0/0:28,0:28:81.25:0,81,1131	0/0:23,0:23:69.23:0,69,991	0/0:24,0:24:72.24:0,72,1034	0/0:33,0:32:99:0,99,1406	1/1:0,18:18:48.15:595,48,0	1/1:0,23:23:69.21:844,69,0	0/0:22,0:22:66.22:0,66,945	1/1:0,11:11:27.08:335,27,0
chr10	54401088	.	T	TA	9621.85	PASS	AB=0.702;AC=40;AF=0.714;AN=56;BaseQRankSum=-9.950;DP=650;FS=3.352;HRun=11;HaplotypeScore=65.2387;InbreedingCoeff=0.6585;MQ=76.94;MQ0=1;MQRankSum=-1.239;QD=18.90;ReadPosRankSum=1.315;VQSLOD=6.0827;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,21:32:36.72:539,37,0	1/1:0,11:11:30.02:294,30,0	0/1:23,0:23:4.57:5,0,119	0/0:19,0:15:3.91:0,4,102	1/1:7,28:37:86.55:788,87,0	1/1:4,20:25:22.51:576,23,0	1/1:4,12:16:24.05:244,24,0	1/1:9,17:26:48.08:481,48,0	1/1:3,9:12:0.82:189,1,0	1/1:7,20:27:21.04:506,21,0	1/1:4,23:29:71.77:688,72,0	0/0:26,0:29:68.73:0,69,490	0/0:29,0:30:58.74:0,59,442	1/1:4,15:19:39.08:394,39,0	0/1:9,12:21:2.27:323,0,2	1/1:5,20:25:27.87:464,28,0	1/1:5,24:30:65.97:654,66,0	1/1:4,17:21:42.08:426,42,0	1/1:8,13:22:21.68:379,22,0	1/1:5,22:28:45.76:607,46,0	0/1:8,16:24:15.56:401,0,16	0/0:28,0:28:72.58:0,73,553	0/0:17,0:18:44.41:0,44,325	0/0:16,0:16:41.81:0,42,323	1/1:3,23:25:36.89:555,37,0	1/1:3,20:23:57.07:562,57,0	1/1:3,19:21:41.83:413,42,0	0/1:2,6:8:5.11:134,0,5
chr10	54401438	.	A	AG	14877.33	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=13.283;DP=531;FS=6.232;HRun=0;HaplotypeScore=122.0919;InbreedingCoeff=0.9974;MQ=88.91;MQ0=0;MQRankSum=-7.261;QD=37.19;ReadPosRankSum=2.157;VQSLOD=4.1519;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,30:34:84.21:1260,84,0	1/1:0,14:14:42.14:670,42,0	0/0:22,0:22:63.15:0,63,816	0/0:24,0:24:62.99:0,63,820	1/1:1,13:14:36.12:563,36,0	1/1:0,11:11:33.11:514,33,0	1/1:1,18:19:45.15:711,45,0	1/1:0,31:31:93.30:1461,93,0	1/1:1,15:16:45.15:714,45,0	1/1:2,14:16:42.14:671,42,0	1/1:1,10:11:27.09:431,27,0	0/0:15,0:15:45.14:0,45,611	0/0:17,0:17:51.17:0,51,705	1/1:0,16:16:45.15:705,45,0	1/1:0,30:30:90.31:1422,90,0	1/1:0,19:19:57.19:896,57,0	1/1:0,25:25:66.23:1050,66,0	1/1:0,20:20:54.18:861,54,0	1/1:13,0:13:32.34:152,32,0	1/1:15,0:15:19.65:86,20,0	1/1:17,0:17:24.80:126,25,0	0/0:23,0:23:69.14:0,69,937	0/0:9,0:9:21.07:0,21,293	0/0:21,0:21:63.21:0,63,876	1/1:0,22:22:66.22:1040,66,0	1/1:1,19:20:60.20:937,60,0	1/1:27,0:27:29.96:130,30,0	1/1:0,10:10:30.10:478,30,0
chr10	54403349	.	G	GT	10538.29	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-15.326;DP=655;FS=2.100;HRun=0;HaplotypeScore=58.0495;InbreedingCoeff=0.9995;MQ=78.88;MQ0=0;MQRankSum=-2.138;QD=41.17;ReadPosRankSum=5.709;VQSLOD=5.0953;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,45:46:99:1970,126,0	1/1:0,9:9:24.08:375,24,0	0/0:17,0:17:32.02:0,32,498	0/0:12,0:12:32.44:0,32,372	0/0:17,0:17:48.16:0,48,661	0/0:21,0:21:63.21:0,63,879	0/0:32,0:32:96.27:0,96,1269	0/0:32,0:32:96.30:0,96,1307	0/0:16,0:16:48.14:0,48,645	0/0:21,0:21:63.20:0,63,849	0/0:14,0:14:42.13:0,42,568	0/0:22,0:22:63.19:0,63,842	0/0:23,0:23:69.23:0,69,959	0/0:20,0:20:60.16:0,60,800	0/0:19,0:19:57.19:0,57,792	1/1:1,21:21:54.18:835,54,0	1/1:0,40:40:99:1594,102,0	1/1:0,25:25:66.22:1032,66,0	1/1:1,24:25:72.24:1106,72,0	1/1:0,15:16:48.05:670,48,0	1/1:0,53:53:99:2111,135,0	0/0:21,0:21:63.21:0,63,875	0/0:14,0:14:36.11:0,36,482	0/0:25,0:25:75.25:0,75,1047	0/0:34,0:34:99:0,102,1337	0/0:25,0:25:69.22:0,69,940	1/1:0,20:20:54.18:845,54,0	0/0:14,0:14:42.14:0,42,574
chr10	54403630	.	GGAAA	G	10572.43	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=5.682;DP=522;FS=6.883;HRun=0;HaplotypeScore=100.1966;InbreedingCoeff=0.9976;MQ=75.16;MQ0=2;MQRankSum=-4.885;QD=35.72;ReadPosRankSum=4.265;VQSLOD=4.3732;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:63.13:0,63,1203	0/0:13,0:13:36.11:0,36,795	0/0:26,0:21:59.81:0,60,718	0/0:14,0:12:23.09:0,23,326	1/1:1,16:17:41.78:626,42,0	1/1:0,24:26:57.10:1017,57,0	1/1:0,16:18:39.07:689,39,0	1/1:0,15:16:48.09:767,48,0	1/1:0,13:13:26.82:551,27,0	1/1:9,13:23:69.02:988,69,0	1/1:1,19:21:59.65:825,60,0	0/0:17,0:17:51.13:0,51,1229	0/0:18,0:18:54.15:0,54,1243	1/1:1,15:18:41.15:812,41,0	1/1:4,12:16:46.36:813,46,0	0/0:11,0:11:18.05:0,18,416	0/0:23,0:23:59.93:0,60,1168	0/0:16,0:16:39.04:0,39,766	1/1:4,0:16:40.78:317,41,0	1/1:0,0:19:45.43:327,45,0	1/1:0,0:15:29.27:233,29,0	0/0:20,0:20:60.17:0,60,1264	0/0:22,0:22:63.13:0,63,1340	0/0:18,0:18:54.17:0,54,1276	1/1:2,26:30:54.45:885,54,0	1/1:0,20:20:60.12:1000,60,0	1/1:0,1:17:38.86:335,39,0	1/1:0,10:10:21.04:387,21,0
chr10	54403631	.	G	GA	694.08	PASS	AB=0.804;AC=10;AF=0.179;AN=56;BaseQRankSum=-7.814;DP=530;FS=6.433;HRun=14;HaplotypeScore=114.7207;InbreedingCoeff=0.2620;MQ=74.96;MQ0=2;MQRankSum=4.729;QD=4.37;ReadPosRankSum=-0.381;VQSLOD=1.9027;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,21:31:38.92:333,39,0	1/1:5,7:13:17.84:146,18,0	0/1:27,0:21:2.53:3,0,44	0/1:14,0:12:14.70:15,0,21	0/0:18,0:17:18.79:0,19,57	0/0:26,0:26:32.77:0,33,102	0/0:18,0:18:25.17:0,25,76	0/0:16,0:16:21.26:0,21,65	0/0:13,0:13:18.57:0,19,58	0/0:22,0:22:25.33:0,25,77	0/0:20,0:21:22.53:0,23,70	0/0:15,0:16:34.46:0,34,217	0/0:17,1:19:2.13:0,2,133	0/0:18,0:18:29.24:0,29,89	0/0:15,0:15:27.95:0,28,88	0/1:4,9:13:23.71:64,0,24	0/1:13,10:23:44.06:152,0,44	0/1:9,9:18:17.49:111,0,17	0/0:18,0:18:25:0,25,74	0/0:19,0:19:22.55:0,23,70	0/0:15,0:15:18.37:0,18,58	0/1:17,3:20:22:22,0,92	0/0:19,0:22:13.72:0,14,193	0/0:15,0:18:32.53:0,33,190	0/0:30,0:30:27.58:0,28,83	0/0:20,0:20:29.94:0,30,89	0/0:17,0:17:26.67:0,27,83	0/0:10,0:10:12.38:0,12,38
chr10	54404341	.	C	CG	10639.41	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-2.915;DP=762;FS=1.581;HRun=3;HaplotypeScore=87.3080;InbreedingCoeff=0.9977;MQ=88.38;MQ0=0;MQRankSum=-1.959;QD=36.81;ReadPosRankSum=0.623;VQSLOD=5.0573;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:56:99:0,159,1879	0/0:11,0:11:33.07:0,33,380	0/0:28,0:28:71.08:0,71,816	0/0:26,0:26:63.18:0,63,752	1/1:2,23:25:63.21:880,63,0	1/1:1,20:21:51.15:695,51,0	1/1:2,38:40:99:1509,108,0	1/1:0,24:24:69.09:913,69,0	1/1:1,24:25:63.21:881,63,0	1/1:3,31:34:90.29:1241,90,0	1/1:0,24:24:72.24:1007,72,0	0/0:29,0:29:87.27:0,87,1038	0/0:32,0:32:93.20:0,93,1071	1/1:0,19:19:48.16:672,48,0	1/1:3,20:23:51.17:713,51,0	0/0:21,0:21:60.17:0,60,708	0/0:43,0:43:99:0,126,1469	0/0:26,0:26:75.23:0,75,897	0/0:23,0:23:60.08:0,60,687	0/0:31,0:31:93.28:0,93,1106	0/0:47,0:47:99:0,129,1504	0/0:18,0:18:51.16:0,51,612	0/0:27,0:27:75.23:0,75,898	0/0:32,0:32:93.28:0,93,1114	1/1:0,23:23:66.22:923,66,0	1/1:2,23:25:72.24:995,72,0	0/0:23,0:23:63.19:0,63,754	1/1:0,6:6:15.05:210,15,0
chr10	54406135	.	C	CAGATAGAT	2535.07	PASS	AB=0.954;AC=35;AF=0.729;AN=48;BaseQRankSum=-0.672;DP=543;FS=7.245;HRun=0;HaplotypeScore=158.4431;InbreedingCoeff=0.4337;MQ=70.34;MQ0=11;MQRankSum=-0.488;QD=7.57;ReadPosRankSum=0.401;VQSLOD=1.9073;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:30.08:0,30,609	0/0:6,0:8:6.02:0,6,109	./.	./.	1/1:13,0:13:3.01:48,3,0	1/1:11,4:15:3.01:120,3,0	0/1:30,0:30:6.62:19,0,7	./.	0/1:14,0:16:3.26:3,0,295	1/1:11,0:11:9.02:54,9,0	1/1:8,0:9:2.99:24,3,0	0/0:27,0:28:24.07:0,24,504	1/1:16,0:16:2.89:20,3,0	1/1:19,1:21:14.62:341,15,0	1/1:15,7:25:6.02:240,6,0	0/0:15,0:21:24.08:0,24,436	1/1:15,0:15:9.50:244,10,0	1/1:16,0:16:9.03:163,9,0	1/1:28,0:28:15.05:361,15,0	1/1:17,0:17:9.03:214,9,0	1/1:30,0:29:6.02:150,6,0	1/1:8,0:7:2.87:24,3,0	./.	0/0:16,0:16:3.01:0,3,73	1/1:24,0:23:14.90:315,15,0	0/1:21,0:21:54.62:106,0,55	1/1:11,0:11:6.02:169,6,0	1/1:1,0:5:8.98:73,9,0
chr10	54406254	.	G	GGTGA	2541.43	PASS	AB=0.856;AC=13;AF=0.232;AN=56;BaseQRankSum=2.093;DP=699;FS=10.926;HRun=0;HaplotypeScore=227.2315;InbreedingCoeff=-0.3175;MQ=47.91;MQ0=22;MQRankSum=-7.611;QD=7.20;ReadPosRankSum=-4.859;VQSLOD=0.3975;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:47,7:53:99:475,0,748	0/1:5,1:6:90.92:127,0,91	0/0:38,0:12:14.99:0,15,180	0/0:44,0:23:22.31:0,22,379	0/0:8,0:8:9.03:0,9,154	0/0:22,0:21:45:0,45,661	0/0:33,0:33:28.02:0,28,893	0/0:37,0:32:63.22:0,63,1066	0/0:22,0:22:54.16:0,54,830	0/0:19,0:17:45.15:0,45,740	0/0:6,0:6:5.89:0,6,58	0/1:35,6:41:99:162,0,761	0/1:27,2:29:84.21:84,0,834	0/0:30,0:30:51.13:0,51,822	0/0:30,0:29:60.07:0,60,903	0/1:29,6:35:99:450,0,796	0/1:14,4:18:99:265,0,430	0/1:22,4:26:99:359,0,348	0/1:13,5:18:99:270,0,338	0/0:8,2:10:8.78:0,9,153	0/1:37,7:42:99:206,0,290	0/1:12,8:20:88.47:88,0,237	0/1:8,2:10:29.85:30,0,46	0/1:29,4:33:32.30:32,0,555	0/0:16,0:16:16.75:0,17,270	0/0:18,0:17:45.15:0,45,755	0/1:18,1:19:99:146,0,456	0/0:13,0:12:24.55:0,25,398
chr10	54406286	.	AGTGG	A	4681.75	PASS	AB=0.885;AC=30;AF=0.536;AN=56;BaseQRankSum=6.142;DP=616;FS=14.909;HRun=0;HaplotypeScore=212.1172;InbreedingCoeff=0.0959;MQ=41.74;MQ0=25;MQRankSum=-4.865;QD=11.12;ReadPosRankSum=2.673;VQSLOD=2.9907;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:36,21:56:94.34:94,0,791	0/1:10,0:9:3.29:3,0,243	0/0:28,0:5:8.21:0,8,195	0/0:37,0:9:22.63:0,23,208	1/1:5,0:4:2.20:24,2,0	1/1:18,0:17:23.69:238,24,0	0/1:24,0:24:37.32:234,0,37	1/1:16,0:10:15:132,15,0	1/1:18,0:19:11.93:469,12,0	1/1:15,0:13:29.52:471,30,0	0/1:8,0:8:7.24:7,0,20	0/1:22,11:33:99:191,0,641	0/1:20,8:27:99:383,0,481	1/1:22,2:23:19.44:494,19,0	1/1:21,1:21:4.66:457,5,0	0/1:31,7:38:99:256,0,1490	0/1:19,1:20:48.14:48,0,763	0/1:19,2:21:99:132,0,874	0/1:14,2:13:94.14:94,0,321	0/0:6,3:9:8.65:0,9,146	0/0:60,1:55:19.02:0,19,1327	0/0:17,3:20:34.98:0,35,619	0/0:8,2:10:6.02:0,6,226	0/0:30,0:30:22.15:0,22,726	1/1:13,0:12:25.88:264,26,0	1/1:14,0:13:25.62:413,26,0	0/1:11,5:16:99:205,0,565	0/1:4,0:4:9.24:70,0,9
chr10	54406296	.	TGA	T	817.01	PASS	AB=0.754;AC=13;AF=0.232;AN=56;BaseQRankSum=9.972;DP=643;FS=14.517;HRun=0;HaplotypeScore=216.8710;InbreedingCoeff=-0.0875;MQ=42.14;MQ0=28;MQRankSum=-7.852;QD=4.35;ReadPosRankSum=6.498;VQSLOD=1.2468;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:54:47.87:0,48,799	0/0:9,0:8:24.04:0,24,401	0/0:31,0:8:24.05:0,24,395	0/0:41,0:11:27.06:0,27,413	0/0:3,2:4:0:0,0,0	0/1:10,8:17:44.69:45,0,55	0/1:21,5:26:57.57:58,0,174	0/1:10,0:5:4.62:5,0,27	0/1:13,10:23:99:115,0,110	0/1:5,8:11:51.37:231,0,51	0/1:4,3:7:8.12:8,0,24	0/0:37,0:37:63.36:0,63,1086	0/0:26,0:25:12.57:0,13,739	0/1:15,10:24:99:134,0,106	0/1:10,11:21:89.16:97,0,89	0/0:39,0:39:67.66:0,68,1593	0/0:21,0:21:46.69:0,47,1012	0/0:23,0:23:13.50:0,13,879	0/0:20,0:12:13.17:0,13,516	0/0:14,0:13:9.97:0,10,353	0/0:70,0:64:98.77:0,99,1771	0/0:20,0:19:38.90:0,39,700	0/0:11,0:11:23.72:0,24,348	0/0:33,0:33:53.45:0,53,1008	1/1:6,6:11:5.71:71,6,0	0/1:5,7:10:39.84:177,0,40	0/1:18,0:18:0.71:1,0,580	0/1:2,1:3:22.30:22,0,47
chr10	54406302	.	A	AGAGT	2674.12	PASS	AB=0.862;AC=13;AF=0.241;AN=54;BaseQRankSum=5.011;DP=671;FS=15.326;HRun=0;HaplotypeScore=229.7755;InbreedingCoeff=-0.1101;MQ=43.71;MQ0=30;MQRankSum=-4.494;QD=12.55;ReadPosRankSum=-0.183;VQSLOD=1.9706;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:50:31.30:0,31,993	0/0:11,0:10:27.09:0,27,441	0/0:30,0:8:21.07:0,21,372	0/0:37,0:9:21.01:0,21,277	./.	0/1:18,0:17:22.83:216,0,23	0/1:11,14:28:59.66:268,0,60	0/1:15,0:12:3.55:202,0,4	0/1:15,8:23:99:233,0,149	0/1:11,5:15:70.96:334,0,71	0/0:5,2:8:2.97:0,3,43	0/0:36,0:37:7.60:0,8,1074	0/1:25,0:25:9.08:9,0,832	0/1:22,1:22:55.66:463,0,56	0/1:19,1:20:48.96:359,0,49	0/0:41,0:41:65.10:0,65,1756	0/0:23,0:23:69.15:0,69,1179	0/0:23,0:23:1.75:0,2,914	0/0:22,0:13:12.63:0,13,494	0/0:15,0:14:24.04:0,24,396	0/0:75,0:69:72.17:0,72,1966	0/0:22,0:21:42.40:0,42,767	0/1:12,0:12:18.88:19,0,335	0/0:35,0:35:58.43:0,58,1032	1/1:7,2:9:13.41:254,13,0	0/1:11,7:16:71.14:407,0,71	0/0:21,0:21:50.78:0,51,780	0/1:2,1:3:63.13:64,0,63
chr10	54406306	.	GGTGA	G	4191.60	PASS	AB=0.907;AC=30;AF=0.536;AN=56;BaseQRankSum=10.752;DP=706;FS=14.612;HRun=0;HaplotypeScore=227.8402;InbreedingCoeff=0.4054;MQ=43.38;MQ0=28;MQRankSum=-8.106;QD=10.67;ReadPosRankSum=0.722;VQSLOD=1.9331;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:51,4:54:72.23:72,0,1248	0/0:11,0:10:21.07:0,21,422	0/0:32,0:10:26.89:0,27,388	0/0:32,0:7:8.98:0,9,138	1/1:3,4:6:2.16:18,2,0	1/1:17,3:19:35.91:431,36,0	1/1:26,0:26:10.85:133,11,0	1/1:3,12:12:26.60:331,27,0	1/1:18,6:24:30.13:360,30,0	1/1:14,6:18:45.11:616,45,0	1/1:7,3:10:2.16:32,2,0	0/1:35,4:39:54.40:54,0,1142	0/1:26,4:29:99:151,0,848	1/1:15,8:22:44.67:520,45,0	1/1:11,9:20:21.82:397,22,0	0/0:39,2:40:1.26:0,1,1816	0/0:22,1:23:4.04:0,4,1094	0/1:21,2:23:39.81:40,0,1084	0/1:22,2:15:62.41:62,0,519	0/0:15,2:16:4.86:0,5,564	0/0:80,1:75:99:0,106,2654	0/0:24,1:24:17.92:0,18,999	0/0:13,1:14:7.92:0,8,535	0/0:37,0:37:62.72:0,63,1418	1/1:7,6:11:26.71:268,27,0	1/1:15,4:16:38.61:518,39,0	0/1:18,3:21:96.33:96,0,831	1/1:4,0:4:6.02:92,6,0
chr10	54406310	.	A	AGTGG	4568	PASS	AB=0.984;AC=30;AF=0.536;AN=56;BaseQRankSum=7.797;DP=706;FS=4.514;HRun=0;HaplotypeScore=228.8584;InbreedingCoeff=0.2612;MQ=44.30;MQ0=25;MQRankSum=-6.793;QD=10.75;ReadPosRankSum=-0.495;VQSLOD=3.9881;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:49,1:49:58.21:58,0,1197	0/0:12,0:11:21.11:0,21,396	0/0:34,0:12:32.98:0,33,467	0/0:29,0:5:8.06:0,8,145	1/1:7,0:6:2.95:19,3,0	1/1:18,0:18:25.04:415,25,0	1/1:27,0:27:8.42:359,8,0	1/1:15,0:13:26.67:352,27,0	0/1:23,0:24:5.90:374,0,6	1/1:19,0:18:9.93:476,10,0	1/1:9,0:9:2.94:38,3,0	0/1:41,0:41:85.66:86,0,1021	0/1:31,0:30:99:140,0,727	1/1:24,0:23:19.60:557,20,0	1/1:18,0:19:19.04:453,19,0	0/0:41,0:40:7.28:0,7,1456	0/0:24,0:24:42.61:0,43,1007	0/1:23,0:24:99:148,0,824	0/1:22,0:14:63:63,0,447	0/1:16,1:16:0.99:1,0,470	0/0:78,2:74:35.59:0,36,2193	0/1:23,0:22:0.84:1,0,842	0/1:14,0:14:49.79:50,0,449	0/0:35,2:37:49.39:0,49,1147	1/1:15,0:13:26.49:356,26,0	1/1:21,0:18:9.91:488,10,0	0/0:23,0:23:2.63:0,3,761	0/1:5,0:5:4.97:135,0,5
chr10	54406669	.	GCACA	G	3679.63	PASS	AB=0.676;AC=40;AF=0.769;AN=52;BaseQRankSum=1.345;DP=628;FS=1.205;HRun=0;HaplotypeScore=155.3515;InbreedingCoeff=0.5638;MQ=52.73;MQ0=15;MQRankSum=-2.885;QD=8.32;ReadPosRankSum=-0.105;VQSLOD=2.9682;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:46:2.07:50,2,0	1/1:5,0:11:15.02:139,15,0	./.	./.	1/1:7,9:17:6.01:75,6,0	1/1:7,10:19:24.08:375,24,0	1/1:21,14:35:17.39:280,17,0	1/1:18,0:18:5.01:27,5,0	1/1:9,13:23:30.09:431,30,0	1/1:10,8:19:0.49:311,0,0	1/1:5,8:14:11.98:141,12,0	0/0:10,0:22:29.72:0,30,500	0/0:18,0:27:48.16:0,48,840	1/1:8,14:23:29.31:429,29,0	1/1:9,7:17:15.05:235,15,0	0/1:12,0:22:11.60:99,0,12	0/1:13,0:23:28.47:76,0,28	1/1:5,0:12:12.01:112,12,0	1/1:15,0:16:2.84:14,3,0	1/1:8,0:19:2.96:19,3,0	1/1:23,0:20:0.06:1,0,0	0/0:20,0:22:27.07:0,27,496	0/0:18,0:18:27.06:0,27,409	0/0:30,1:59:19.28:0,19,1026	1/1:9,9:20:15.04:214,15,0	1/1:18,8:26:27.52:353,28,0	1/1:10,0:18:6.26:103,6,0	1/1:4,7:13:15.04:197,15,0
chr10	54408426	.	C	CCG	6121.62	PASS	AB=0.889;AC=38;AF=0.679;AN=56;BaseQRankSum=-7.162;DP=1218;FS=28.263;HRun=0;HaplotypeScore=984.4921;InbreedingCoeff=0.5748;MQ=45.94;MQ0=24;MQRankSum=-1.819;QD=6.71;ReadPosRankSum=2.251;VQSLOD=0.4479;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:32,2:34:41.01:331,41,0	1/1:19,1:21:8.65:115,9,0	0/0:23,0:17:39.22:0,39,412	0/0:29,0:18:37.73:0,38,424	1/1:56,0:55:38.74:226,39,0	1/1:48,0:45:51.78:343,52,0	1/1:31,0:31:44.17:248,44,0	1/1:69,0:66:75.37:727,75,0	1/1:49,0:47:34.34:307,34,0	0/1:82,0:80:70.54:377,0,71	1/1:46,0:45:36.45:224,36,0	0/0:48,0:49:61.07:0,61,409	0/0:48,0:47:38.28:0,38,358	1/1:32,0:30:18.86:177,19,0	1/1:50,0:50:20.64:234,21,0	1/1:34,5:37:45.05:482,45,0	0/1:6,18:24:7.33:84,0,7	1/1:22,2:22:36.52:422,37,0	1/1:21,0:19:0.33:177,0,0	1/1:60,0:59:26.93:328,27,0	1/1:27,0:26:44.62:317,45,0	0/0:66,0:67:1.05:0,1,156	0/0:61,0:61:24.46:0,24,141	0/0:28,0:28:37.28:0,37,386	0/1:57,1:56:25.30:170,0,25	0/1:56,0:54:95.19:301,0,95	1/1:45,0:45:33.31:340,33,0	1/1:40,0:38:2.95:193,3,0
chr10	54408454	.	G	GAA	1288.31	PASS	AB=0.986;AC=21;AF=0.375;AN=56;BaseQRankSum=13.528;DP=1314;FS=70.445;HRun=0;HaplotypeScore=374.3854;InbreedingCoeff=-0.0198;MQ=29.74;MQ0=24;MQRankSum=-5.353;QD=1.28;ReadPosRankSum=4.413;VQSLOD=-0.5438;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:35:14.62:0,15,144	1/1:28,0:28:19.63:169,20,0	0/0:6,0:3:6.02:0,6,89	0/0:11,0:2:6.02:0,6,92	1/1:74,0:73:10.85:28,11,0	0/1:39,2:38:17.08:49,0,17	0/1:28,0:28:3.41:3,0,30	0/1:57,1:57:99:147,0,499	0/1:45,1:44:27.45:27,0,54	0/1:98,1:97:99:223,0,684	1/1:58,0:57:11.05:41,11,0	0/0:49,0:50:29.64:0,30,526	0/0:48,0:47:12.17:0,12,363	0/1:33,0:31:4.69:5,0,32	0/1:47,1:49:9.08:80,0,9	0/1:41,0:39:13.79:14,0,203	0/0:20,0:20:5.20:0,5,123	0/0:19,0:18:28.65:0,29,398	0/0:29,0:22:39.18:0,39,522	0/1:80,0:79:99:143,0,190	0/0:23,0:22:2.81:0,3,148	0/1:95,0:95:99:143,0,103	0/1:75,0:74:87.52:88,0,124	0/0:26,0:26:25.55:0,26,402	1/1:76,0:74:30.94:152,31,0	0/1:72,0:70:99:124,0,956	0/0:41,0:41:39.87:0,40,624	0/1:47,0:45:25.40:25,0,321
chr10	54408460	.	G	GCA	3043.41	PASS	AB=0.979;AC=29;AF=0.537;AN=54;BaseQRankSum=11.707;DP=1093;FS=48.105;HRun=0;HaplotypeScore=350.5775;InbreedingCoeff=-0.2029;MQ=29.38;MQ0=14;MQRankSum=-1.731;QD=3.06;ReadPosRankSum=4.833;VQSLOD=1.3641;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:31:5.13:0,5,43	1/1:24,0:24:2.47:156,2,0	./.	0/0:7,0:1:3.01:0,3,44	1/1:61,0:61:12.68:90,13,0	0/1:34,2:34:1.23:157,0,1	0/1:23,0:24:22.95:23,0,23	0/1:44,1:43:99:351,0,453	0/1:41,1:40:26.83:81,0,27	0/1:79,1:78:99:578,0,742	1/1:47,0:47:12.78:93,13,0	0/1:46,0:46:39.87:40,0,279	0/1:41,0:40:21.49:21,0,195	1/1:31,0:30:0.06:57,0,0	0/1:47,1:48:7.98:119,0,8	0/1:38,0:37:81.26:81,0,143	0/0:16,0:16:4.73:0,5,75	0/0:17,0:16:37.77:0,38,368	0/1:19,0:15:2.63:3,0,295	1/1:61,0:59:18.64:354,19,0	1/1:19,0:18:0.10:1,0,0	0/1:77,0:77:99:299,0,105	0/1:55,0:56:85.78:126,0,86	0/0:21,0:22:22.91:0,23,314	1/1:58,0:57:15.33:235,15,0	0/1:63,0:63:99:278,0,992	0/1:33,0:34:40.24:40,0,328	0/1:42,0:42:15.19:15,0,296
chr10	54408465	.	T	TA	3622.13	PASS	AB=0.751;AC=27;AF=0.519;AN=52;BaseQRankSum=7.381;DP=762;FS=3.900;HRun=0;HaplotypeScore=326.0123;InbreedingCoeff=-0.3524;MQ=29.34;MQ0=5;MQRankSum=-1.150;QD=5.51;ReadPosRankSum=7.116;VQSLOD=2.3580;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:18,3:21:0.70:22,0,1	0/1:10,5:20:21.18:21,0,29	./.	./.	0/0:18,19:46:10.46:0,10,41	0/1:9,5:18:2.44:2,0,8	0/1:12,1:15:6.33:8,0,6	0/1:15,10:24:86.54:543,0,87	0/1:16,2:22:1.21:1,0,14	1/1:20,23:50:95.26:1337,95,0	0/0:20,10:34:21.20:0,21,73	0/1:22,8:33:3.77:36,0,4	1/1:15,9:24:1.17:98,1,0	0/0:11,6:20:0.68:0,1,2	0/1:18,10:29:7.53:8,0,38	0/1:23,7:31:27.04:27,0,54	0/1:12,0:13:15.30:20,0,15	0/1:8,1:9:32.37:32,0,56	0/1:10,4:11:78.69:79,0,165	0/1:22,16:51:52.27:54,0,52	1/1:11,2:15:0.15:0,0,0	0/1:35,21:67:89.60:98,0,90	0/1:19,13:40:9.38:62,0,9	0/1:19,0:19:6.96:7,0,110	0/1:18,16:43:3.76:113,0,4	0/1:26,8:38:99:596,0,248	0/1:6,13:26:49.08:271,0,49	1/1:14,11:26:15.40:185,15,0
chr10	54411828	.	T	TA	3912.85	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-11.028;DP=649;FS=3.752;HRun=1;HaplotypeScore=59.6842;InbreedingCoeff=0.9817;MQ=91.10;MQ0=0;MQRankSum=-3.322;QD=40.34;ReadPosRankSum=2.143;VQSLOD=4.3941;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,114,1467	0/0:6,0:6:18.04:0,18,218	0/0:27,0:27:81.05:0,81,981	0/0:30,0:30:87.24:0,87,1034	0/0:25,0:25:69.19:0,69,865	0/0:23,0:23:69.22:0,69,894	0/0:16,0:16:48.15:0,48,611	0/0:34,0:34:90.26:0,90,1111	0/0:24,0:24:63.20:0,63,817	0/0:30,0:30:81.26:0,81,1039	0/0:14,0:14:39.13:0,39,506	0/0:17,0:17:48.13:0,48,596	0/0:20,0:20:60.16:0,60,746	0/0:19,0:19:57.16:0,57,712	0/0:36,0:36:99:0,108,1336	0/0:27,0:27:78.24:0,78,990	0/0:28,0:28:84.27:0,84,1090	0/0:21,0:21:63.20:0,63,817	1/1:1,15:16:45.14:638,45,0	1/1:1,33:34:96.32:1432,96,0	1/1:1,23:24:57.19:854,57,0	0/0:20,0:20:57.19:0,57,739	0/0:25,0:25:72.17:0,72,867	0/0:19,0:19:57.18:0,57,727	0/0:21,0:21:63.20:0,63,817	0/0:28,0:28:84.26:0,84,1077	1/1:1,22:23:66.22:989,66,0	0/0:3,0:3:9.03:0,9,117
chr10	54413053	.	G	GTTGT	26189.62	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=-12.164;DP=771;FS=0.373;HRun=0;HaplotypeScore=109.8203;InbreedingCoeff=0.9840;MQ=65.61;MQ0=0;MQRankSum=-5.174;QD=45.00;ReadPosRankSum=0.667;VQSLOD=5.0189;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:16,28:46:35.22:1893,35,0	1/1:2,6:9:15.05:336,15,0	0/0:23,0:18:18.06:0,18,290	0/0:37,0:30:20.67:0,21,531	1/1:8,21:29:66.22:1456,66,0	1/1:9,18:28:48.16:1183,48,0	1/1:9,17:27:54.18:1290,54,0	1/1:15,9:27:48.16:1042,48,0	1/1:4,13:17:36.12:888,36,0	1/1:15,16:32:54.08:1220,54,0	1/1:4,9:14:27.09:665,27,0	0/0:25,0:25:66.21:0,66,1061	0/0:24,0:24:63.21:0,63,1027	1/1:7,20:28:54.19:1330,54,0	1/1:4,28:34:78.27:1918,78,0	1/1:8,24:34:63.22:1553,63,0	1/1:12,23:36:54.19:1326,54,0	1/1:13,16:32:56.60:1314,57,0	1/1:10,11:21:36.12:855,36,0	1/1:9,25:36:81.24:1807,81,0	1/1:8,30:38:69.24:1662,69,0	0/0:20,0:20:48.16:0,48,799	0/0:27,0:27:63.20:0,63,1004	0/0:33,0:32:93.30:0,93,1504	1/1:9,10:19:33.11:813,33,0	1/1:8,25:35:83.64:1895,84,0	1/1:6,25:31:63.22:1519,63,0	1/1:4,4:8:9.03:222,9,0
chr10	54413272	.	AT	A	2077.40	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=10.118;DP=650;FS=6.449;HRun=8;HaplotypeScore=60.5218;InbreedingCoeff=0.9951;MQ=80.37;MQ0=0;MQRankSum=-4.268;QD=21.20;ReadPosRankSum=1.469;VQSLOD=3.8832;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,21:23:54.09:521,54,0	1/1:2,6:8:18.03:174,18,0	0/0:16,0:16:30.76:0,31,357	0/0:22,0:21:45.11:0,45,530	0/0:33,0:33:87.22:0,87,1024	0/0:23,0:23:54.14:0,54,629	0/0:27,0:27:81.25:0,81,976	0/0:38,0:38:87.25:0,87,1033	0/0:12,0:12:36.09:0,36,421	0/0:31,0:31:87.25:0,87,1031	0/0:26,0:26:75.23:0,75,903	0/0:26,0:26:69.21:0,69,828	0/0:26,0:26:69.21:0,69,831	0/0:23,0:23:54.17:0,54,652	0/0:25,0:25:60.18:0,60,725	1/1:3,21:24:57.09:550,57,0	1/1:3,21:24:23.86:514,24,0	1/1:0,19:19:51.08:492,51,0	0/0:22,0:22:51.16:0,51,616	0/0:36,0:36:93.24:0,93,1096	0/0:9,0:9:18.06:0,18,217	0/0:22,0:22:66.15:0,66,770	0/0:26,0:26:69.20:0,69,821	0/0:24,0:24:60.18:0,60,724	0/0:15,0:15:42.13:0,42,507	0/0:26,0:26:69.20:0,69,823	0/0:34,0:34:87.23:0,87,1026	0/0:10,0:10:24.03:0,24,264
chr10	54413691	.	A	AT	3907.32	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=4.250;DP=755;FS=1.297;HRun=4;HaplotypeScore=75.6958;InbreedingCoeff=0.9915;MQ=83.69;MQ0=0;MQRankSum=-2.939;QD=38.31;ReadPosRankSum=-0.290;VQSLOD=3.2452;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,123,1395	0/0:4,0:4:12.03:0,12,136	0/0:27,0:27:75.21:0,75,847	0/0:29,0:29:72.15:0,72,774	0/0:28,0:28:78.21:0,78,875	0/0:20,0:20:60.17:0,60,681	0/0:23,0:23:63.18:0,63,715	0/0:43,0:43:99:0,108,1217	0/0:22,0:22:54.14:0,54,602	0/0:30,0:30:90.22:0,90,1009	0/0:29,0:29:84.23:0,84,944	0/0:30,0:30:90.26:0,90,1021	0/0:27,0:27:78.20:0,78,870	0/0:36,0:36:99:0,108,1224	0/0:23,0:23:63.16:0,63,703	0/0:24,0:24:69.20:0,69,783	0/0:37,0:37:99:0,108,1225	0/0:23,0:23:69.17:0,69,770	1/1:1,21:22:63.19:830,63,0	1/1:1,22:23:63.21:862,63,0	1/1:1,29:30:87.29:1190,87,0	0/0:26,0:26:72.19:0,72,806	0/0:30,0:30:84.24:0,84,953	0/0:24,0:24:69.20:0,69,783	0/0:26,0:26:72.20:0,72,817	0/0:29,0:29:84.23:0,84,944	1/1:1,26:27:75.25:1026,75,0	0/0:20,0:20:45.11:0,45,501
chr10	54414535	.	C	CACACACAT	3839.62	PASS	AB=1.000;AC=22;AF=0.393;AN=56;BaseQRankSum=-0.776;DP=630;FS=18.839;HRun=0;HaplotypeScore=167.2780;InbreedingCoeff=0.7425;MQ=58.04;MQ0=17;MQRankSum=0.406;QD=13.47;ReadPosRankSum=-0.129;VQSLOD=1.7704;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:36,0:36:20.92:21,0,437	0/0:10,0:9:20.97:0,21,207	0/0:27,0:18:31.54:0,32,301	0/0:32,0:18:41.13:0,41,330	1/1:26,0:26:6.08:348,6,0	1/1:22,0:22:9.05:340,9,0	1/1:38,0:36:38.83:586,39,0	1/1:29,0:28:53.57:485,54,0	0/1:20,0:20:37.88:63,0,38	1/1:23,0:23:58.49:572,58,0	0/0:5,13:20:2.99:0,3,23	0/0:27,0:27:60.23:0,60,481	0/0:14,0:14:17.97:0,18,143	1/1:16,0:15:1.94:281,2,0	1/1:22,0:22:32.53:357,33,0	0/0:12,0:11:26.96:0,27,222	0/0:24,0:24:43.19:0,43,474	0/0:20,0:20:44.41:0,44,367	0/0:18,0:17:26.18:0,26,290	0/0:16,0:15:38.11:0,38,281	0/0:33,0:33:68.65:0,69,549	0/0:16,0:16:20.79:0,21,159	0/0:19,0:18:29.64:0,30,236	0/0:44,0:42:80.46:0,80,675	1/1:15,0:15:3.01:69,3,0	1/1:25,0:25:31.47:414,31,0	0/0:13,0:12:26.94:0,27,254	1/1:13,0:12:28.82:304,29,0
chr10	54414537	.	C	CACACAT	3738.20	PASS	AB=0.873;AC=21;AF=0.375;AN=56;BaseQRankSum=-2.022;DP=645;FS=9.537;HRun=0;HaplotypeScore=149.9272;InbreedingCoeff=0.6855;MQ=54.17;MQ0=18;MQRankSum=0.437;QD=12.98;ReadPosRankSum=1.388;VQSLOD=2.2896;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:38,0:38:3.35:3,0,432	0/0:12,0:11:23.97:0,24,218	0/0:24,0:15:31.54:0,32,301	0/0:31,0:17:41.13:0,41,330	1/1:26,0:26:5.90:344,6,0	1/1:22,0:22:9.04:354,9,0	1/1:38,0:36:9.03:565,9,0	1/1:28,0:27:51.42:483,51,0	0/1:8,12:20:39.43:95,0,39	1/1:22,0:22:24.77:463,25,0	0/0:20,0:20:2.98:0,3,22	0/0:31,0:31:62.75:0,63,497	0/0:15,0:15:27.52:0,28,218	1/1:15,0:14:2.99:298,3,0	1/1:21,0:21:32.55:357,33,0	0/0:12,0:11:26.96:0,27,222	0/0:29,0:29:46.96:0,47,458	0/0:27,0:27:44.74:0,45,359	0/0:16,0:15:42.31:0,42,334	0/0:16,0:15:38.11:0,38,281	0/0:32,0:32:68.82:0,69,550	0/0:15,0:15:23.72:0,24,176	0/0:20,0:19:32.75:0,33,261	0/0:46,0:44:92.35:0,92,751	1/1:3,10:17:3.01:101,3,0	0/1:26,0:26:10.26:373,0,10	0/0:11,0:10:26.94:0,27,240	1/1:14,0:12:28.40:302,28,0
chr10	54415780	.	C	CGT	4983.79	PASS	AB=0.836;AC=22;AF=0.393;AN=56;BaseQRankSum=6.466;DP=829;FS=2.060;HRun=0;HaplotypeScore=276.3770;InbreedingCoeff=0.5898;MQ=52.24;MQ0=3;MQRankSum=-1.293;QD=12.55;ReadPosRankSum=-1.860;VQSLOD=3.8192;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:33:7.52:0,8,141	0/1:9,0:8:0.93:1,0,64	0/0:21,0:11:17.48:0,17,144	0/0:23,0:14:9.85:0,10,39	0/1:18,8:26:3.06:258,0,3	1/1:15,4:19:23.35:267,23,0	0/1:28,14:42:21.31:421,0,21	1/1:38,5:40:20.99:470,21,0	1/1:17,13:30:29.89:571,30,0	1/1:20,10:29:20.92:542,21,0	1/1:13,5:18:8.89:117,9,0	0/0:39,0:39:99:0,105,1388	0/0:46,0:46:99:0,117,1569	0/1:31,9:40:16.44:388,0,16	1/1:24,17:41:19.28:778,19,0	0/1:26,0:26:12.86:13,0,142	0/0:25,0:24:25.84:0,26,160	0/0:19,0:19:22.24:0,22,372	0/0:21,0:18:40.56:0,41,278	0/0:25,0:25:47.54:0,48,380	0/0:51,0:51:40.22:0,40,354	0/0:28,0:28:81.26:0,81,1132	0/0:20,0:20:57.13:0,57,764	0/0:52,0:52:99:0,138,1744	1/1:17,11:28:17.35:328,17,0	1/1:20,12:32:46.95:640,47,0	0/0:28,0:28:65.27:0,65,482	0/1:7,6:13:9.76:189,0,10
chr10	54415782	.	TGC	T	2897.12	PASS	AB=0.986;AC=26;AF=0.464;AN=56;BaseQRankSum=3.735;DP=820;FS=46.741;HRun=0;HaplotypeScore=264.0820;InbreedingCoeff=-0.2185;MQ=50.31;MQ0=5;MQRankSum=-1.631;QD=4.79;ReadPosRankSum=-0.053;VQSLOD=1.6160;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:32,0:31:4.05:38,0,4	0/1:11,0:10:25.90:28,0,26	0/0:23,0:11:8.60:0,9,50	0/1:18,0:8:5.27:5,0,9	0/1:25,0:25:2.09:2,0,89	0/1:19,0:19:13.66:50,0,14	0/1:41,1:42:99:151,0,154	0/1:40,1:38:99:235,0,270	0/1:28,0:28:43.68:44,0,52	0/1:30,0:29:86.41:99,0,86	0/1:18,0:18:10.11:17,0,10	0/0:42,0:42:40.29:0,40,1320	0/0:47,0:47:99:0,102,1648	0/1:40,0:40:99:177,0,102	0/1:38,3:41:49.96:172,0,50	0/1:27,0:26:24.74:25,0,48	0/1:23,0:22:18.54:40,0,19	0/1:18,0:18:18.52:134,0,19	1/1:4,5:14:35.56:331,36,0	1/1:7,12:24:44.78:447,45,0	1/1:31,9:50:26.83:260,27,0	0/0:31,0:31:87.15:0,87,1286	0/0:21,0:21:57.03:0,57,837	0/0:51,0:51:99:0,126,1909	0/1:27,2:29:48.46:102,0,48	0/1:34,0:34:99:142,0,126	1/1:8,11:25:56.85:540,57,0	0/1:12,1:13:32.91:33,0,114
chr10	54415787	.	G	GCACACACACACA	3908.43	PASS	AB=1.000;AC=22;AF=0.393;AN=56;BaseQRankSum=-0.264;DP=812;FS=8.423;HRun=0;HaplotypeScore=390.4924;InbreedingCoeff=-0.0506;MQ=49.78;MQ0=9;MQRankSum=-2.702;QD=7.79;ReadPosRankSum=-8.411;VQSLOD=-0.6812;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,4:26:0.35:0,0,1	1/1:11,1:11:5.19:196,5,0	0/0:28,0:10:17.62:0,18,182	0/1:21,0:7:5.71:6,0,7	0/1:26,0:26:38.48:38,0,297	0/1:18,0:18:69.53:91,0,70	0/1:41,0:41:71.47:71,0,553	0/1:42,0:39:99:218,0,300	0/0:27,0:27:29.25:0,29,318	0/1:27,0:26:18.85:19,0,338	0/1:16,0:16:14.94:15,0,33	0/0:41,0:41:99:0,114,3370	0/0:44,0:44:99:0,122,3673	0/1:44,0:44:99:215,0,358	0/1:40,0:40:19.19:19,0,718	1/1:12,14:28:16.25:849,16,0	1/1:8,8:23:26.99:1118,27,0	1/1:13,3:17:26.78:789,27,0	0/1:20,0:17:45.59:46,0,397	0/1:22,0:22:4.30:4,0,322	0/1:44,0:43:21.45:21,0,133	0/0:31,0:31:90.27:0,90,2684	0/0:23,0:23:63.13:0,63,1744	0/0:51,0:51:99:0,144,4296	0/1:26,0:26:34.32:34,0,339	0/1:33,0:33:99:158,0,314	0/0:24,0:24:7.82:0,8,653	0/0:13,0:13:25.91:0,26,358
chr10	54415833	.	TG	T	3153.76	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=5.892;DP=779;FS=0.413;HRun=2;HaplotypeScore=164.6312;InbreedingCoeff=0.9936;MQ=69.04;MQ0=2;MQRankSum=-1.820;QD=28.16;ReadPosRankSum=0.438;VQSLOD=3.1099;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:93.27:0,93,1367	0/0:8,0:8:21.06:0,21,292	0/0:32,0:31:81.30:0,81,1280	0/0:32,0:25:62.55:0,63,880	0/0:26,0:26:60.20:0,60,899	0/0:12,0:12:36.12:0,36,538	0/0:32,0:32:93.32:0,93,1392	0/0:28,0:27:78.26:0,78,1146	0/0:26,0:26:75.25:0,75,1122	0/0:28,0:28:78.26:0,78,1149	0/0:7,0:7:14.92:0,15,225	0/0:40,0:40:99:0,117,1731	0/0:40,0:40:99:0,114,1709	0/0:46,0:46:99:0,135,1993	0/0:41,0:41:99:0,117,1751	0/0:32,0:32:90.30:0,90,1342	0/0:23,0:23:57.15:0,57,828	0/0:14,0:14:39.10:0,39,560	1/1:0,24:24:69.22:893,69,0	1/1:3,12:15:30.10:386,30,0	1/1:2,51:53:99:1314,102,0	0/0:37,0:37:99:0,111,1655	0/0:16,0:16:45.15:0,45,674	0/0:45,0:45:99:0,132,1977	0/0:34,0:34:96.28:0,96,1413	0/0:26,0:25:75.24:0,75,1091	1/1:0,20:20:57.14:721,57,0	0/0:8,0:8:24.08:0,24,357
chr10	54418827	.	C	CATTT	29135.27	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=-12.435;DP=718;FS=2.795;HRun=0;HaplotypeScore=106.8621;InbreedingCoeff=0.9999;MQ=86.12;MQ0=1;MQRankSum=-9.795;QD=67.44;ReadPosRankSum=-2.620;VQSLOD=6.3393;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,111,2152	0/0:12,0:12:36.12:0,36,698	0/0:25,0:25:69.13:0,69,1260	0/0:27,0:27:69.19:0,69,1249	1/1:8,29:40:99:2137,108,0	1/1:5,23:28:84.24:2070,84,0	1/1:3,21:25:60.17:1514,60,0	1/1:10,23:34:93.31:2426,93,0	1/1:3,27:31:87.30:2341,87,0	1/1:3,21:25:75.24:1970,75,0	1/1:3,15:19:45.11:1142,45,0	0/0:28,0:28:84.29:0,84,1627	0/0:29,0:29:84.29:0,84,1619	1/1:2,15:18:45.15:1148,45,0	1/1:5,28:36:93.27:2276,93,0	0/0:22,0:22:66.23:0,66,1279	0/0:24,0:24:63.22:0,63,1210	0/0:13,0:13:33.11:0,33,640	1/1:3,16:23:63.17:1588,63,0	1/1:3,23:26:72.20:1800,72,0	1/1:3,19:22:54.10:1312,54,0	0/0:25,0:25:66.21:0,66,1236	0/0:19,0:19:54.19:0,54,1047	0/0:23,0:22:66.23:0,66,1279	1/1:4,20:26:69.19:1736,69,0	1/1:3,26:29:84.29:2273,84,0	1/1:1,33:35:96.24:2498,96,0	1/1:0,12:12:33.11:904,33,0
chr10	54420665	.	AC	A	12594.21	PASS	AB=0.917;AC=43;AF=0.768;AN=56;BaseQRankSum=2.416;DP=757;FS=0.000;HRun=9;HaplotypeScore=85.2770;InbreedingCoeff=0.8577;MQ=79.94;MQ0=0;MQRankSum=-3.750;QD=21.17;ReadPosRankSum=3.918;VQSLOD=5.2962;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,28:39:77.12:712,77,0	1/1:1,17:18:51.03:467,51,0	0/0:32,0:32:59.30:0,59,559	0/1:20,2:22:41.72:42,0,291	1/1:6,16:22:44.98:412,45,0	1/1:4,16:20:48.02:439,48,0	1/1:6,19:25:52.83:472,53,0	1/1:5,22:27:66.01:596,66,0	1/1:5,21:26:57.02:521,57,0	1/1:4,34:38:93.02:851,93,0	1/1:6,20:26:63.02:576,63,0	0/0:21,0:21:54.16:0,54,623	0/0:26,2:28:14.25:0,14,653	1/1:2,21:23:57.03:521,57,0	1/1:2,31:33:93.05:849,93,0	1/1:1,27:28:75.03:686,75,0	1/1:5,31:36:86.88:782,87,0	1/1:2,35:37:99:906,99,0	1/1:5,21:26:60.01:549,60,0	1/1:7,18:25:47.95:431,48,0	1/1:1,23:24:59.52:531,60,0	0/0:30,0:30:63.65:0,64,719	0/0:10,1:11:2.62:0,3,280	0/0:40,0:40:96.26:0,96,1089	1/1:6,27:33:81.03:740,81,0	1/1:5,17:22:54.02:494,54,0	1/1:3,30:33:78.03:714,78,0	1/1:0,12:12:33.01:302,33,0
chr10	54420751	.	TA	T	5204.34	PASS	AB=0.758;AC=39;AF=0.696;AN=56;BaseQRankSum=3.853;DP=748;FS=6.421;HRun=14;HaplotypeScore=97.2425;InbreedingCoeff=0.3381;MQ=72.96;MQ0=1;MQRankSum=-0.312;QD=8.70;ReadPosRankSum=5.195;VQSLOD=4.1232;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:18,16:35:36.45:387,36,0	1/1:6,11:17:13.76:236,14,0	0/1:28,1:22:46.55:47,0,72	0/0:23,0:21:17.70:0,18,134	0/1:14,6:22:8.81:88,0,9	1/1:8,11:20:6.83:183,7,0	0/1:8,15:23:29.01:220,0,29	1/1:14,14:30:10.80:195,11,0	1/1:10,17:27:6.76:335,7,0	1/1:6,20:27:27.55:324,28,0	1/1:9,8:18:18.90:126,19,0	0/0:29,2:34:5.96:0,6,346	0/0:24,1:25:21.26:0,21,302	1/1:1,12:18:16.06:190,16,0	0/1:24,20:45:23.59:413,0,24	0/1:10,10:22:48.58:223,0,49	1/1:14,13:31:29.88:310,30,0	1/1:11,13:26:17.09:250,17,0	0/1:21,10:32:77.43:211,0,77	1/1:12,7:19:23.66:164,24,0	1/1:20,21:42:19.19:387,19,0	0/0:31,0:34:43.92:0,44,398	0/1:22,2:26:21.02:21,0,210	0/0:31,2:33:24.45:0,24,365	1/1:13,11:27:41.58:264,42,0	1/1:10,11:26:4.33:207,4,0	1/1:13,17:29:28.52:342,29,0	1/1:1,5:6:11.85:82,12,0
chr10	54421618	.	C	CA	14570.51	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=3.147;DP=661;FS=21.402;HRun=7;HaplotypeScore=108.8042;InbreedingCoeff=0.9943;MQ=83.62;MQ0=1;MQRankSum=-3.368;QD=29.68;ReadPosRankSum=2.765;VQSLOD=3.2784;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,36:40:99:1267,105,0	1/1:2,6:8:18.06:217,18,0	0/0:34,0:31:34.20:0,34,416	0/0:23,0:22:35.10:0,35,263	1/1:6,24:30:78.20:923,78,0	1/1:4,17:21:19.17:515,19,0	1/1:5,22:27:63.19:761,63,0	1/1:6,14:20:16.13:455,16,0	1/1:2,16:18:42.13:507,42,0	1/1:4,23:27:69.18:808,69,0	1/1:2,21:23:63.19:756,63,0	0/0:16,0:16:42.04:0,42,395	0/0:17,0:17:51.07:0,51,487	1/1:3,16:19:45.14:544,45,0	1/1:1,16:17:42.13:507,42,0	1/1:4,22:26:60.18:725,60,0	1/1:2,36:38:99:1196,99,0	1/1:3,20:23:57.17:689,57,0	1/1:2,22:24:69.17:816,69,0	1/1:5,26:32:87.08:1010,87,0	1/1:4,7:11:21.06:254,21,0	0/0:32,0:32:81.09:0,81,771	0/0:19,0:19:57.08:0,57,546	0/0:28,0:28:78.08:0,78,737	1/1:1,18:20:60.05:703,60,0	1/1:4,20:24:59.48:723,59,0	1/1:1,21:23:48.13:579,48,0	1/1:0,19:19:51.16:616,51,0
chr10	54421625	.	A	AC	3797.56	PASS	AB=0.992;AC=32;AF=0.571;AN=56;BaseQRankSum=9.828;DP=656;FS=2.759;HRun=3;HaplotypeScore=148.5410;InbreedingCoeff=0.2806;MQ=81.00;MQ0=1;MQRankSum=-1.532;QD=7.78;ReadPosRankSum=7.010;VQSLOD=0.7240;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:37,1:38:94.30:444,94,0	0/1:7,0:7:8.43:40,0,8	0/0:31,0:29:56.92:0,57,489	0/0:22,0:20:30.19:0,30,307	1/1:25,3:28:47.91:346,48,0	1/1:19,0:19:7.05:141,7,0	0/1:26,0:26:32.62:160,0,33	0/1:25,0:25:75.95:76,0,159	1/1:16,0:16:36.39:149,36,0	1/1:24,0:24:26.16:163,26,0	1/1:20,2:22:54.92:284,55,0	0/0:17,0:17:45.10:0,45,508	0/0:18,0:18:51.14:0,51,598	1/1:16,0:16:39.43:164,39,0	0/1:18,0:18:11.86:98,0,12	1/1:25,0:25:2.90:148,3,0	1/1:39,0:39:21.22:290,21,0	0/1:24,0:24:13.91:148,0,14	0/1:27,0:27:6.37:145,0,6	0/1:31,3:34:48.01:277,0,48	0/1:8,0:8:4.76:57,0,5	0/0:30,0:30:84.01:0,84,954	0/0:21,0:21:56.99:0,57,642	0/0:27,0:27:72.20:0,72,847	1/1:19,1:20:46.78:221,47,0	0/1:24,0:24:45.58:131,0,46	0/1:29,0:28:90.67:125,0,91	1/1:19,0:19:44.99:194,45,0
chr10	54422357	.	GT	G	4612.83	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=19.987;DP=780;FS=8.325;HRun=2;HaplotypeScore=269.8089;InbreedingCoeff=0.9993;MQ=64.17;MQ0=0;MQRankSum=-18.811;QD=8.02;ReadPosRankSum=5.143;VQSLOD=1.9645;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:52,0:52:83.24:330,83,0	1/1:15,0:15:29.46:118,29,0	0/0:16,0:14:42.13:0,42,586	0/0:28,0:27:52.57:0,53,1009	1/1:34,0:34:73.89:293,74,0	1/1:27,0:27:61.60:249,62,0	1/1:27,0:27:47.74:189,48,0	1/1:31,0:31:42.45:184,42,0	1/1:33,1:34:70.06:292,70,0	1/1:33,0:32:72.30:304,72,0	1/1:20,0:20:29.46:117,29,0	0/0:28,0:28:84.28:0,84,1257	0/0:44,0:44:99:0,129,1860	1/1:28,1:29:59.01:245,59,0	1/1:27,0:27:47.88:192,48,0	1/1:35,0:35:77.34:309,77,0	1/1:23,0:23:47.78:192,48,0	1/1:19,0:19:46.08:206,46,0	1/1:15,0:15:29.51:123,30,0	1/1:27,1:28:48.41:205,48,0	1/1:24,1:25:25.15:111,25,0	0/0:26,0:26:78.25:0,78,1145	0/0:27,0:27:81.26:0,81,1192	0/0:36,0:36:99:0,108,1581	1/1:33,0:33:74.98:301,75,0	1/1:29,0:29:71.47:289,71,0	1/1:26,0:26:55.59:223,56,0	1/1:13,0:13:34.56:140,35,0
chr10	54422358	.	TTAA	T	22275.91	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=19.361;DP=692;FS=8.271;HRun=0;HaplotypeScore=213.3415;InbreedingCoeff=0.9998;MQ=67.69;MQ0=0;MQRankSum=-19.521;QD=45.93;ReadPosRankSum=5.906;VQSLOD=5.1944;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,40:40:99:1714,99,0	1/1:0,12:12:33.11:579,33,0	0/0:17,0:15:45.15:0,45,921	0/0:28,0:27:80.64:0,81,1755	1/1:1,31:32:81.16:1419,81,0	1/1:0,24:24:69.24:1214,69,0	1/1:1,19:20:50.84:893,51,0	1/1:16,0:16:48.16:810,48,0	1/1:1,29:30:84.29:1456,84,0	1/1:2,28:29:81.24:1392,81,0	1/1:0,18:18:33.11:578,33,0	0/0:28,0:28:84.29:0,84,2054	0/0:43,0:43:99:0,129,3088	1/1:1,26:27:66.23:1157,66,0	1/1:0,22:22:54.18:947,54,0	1/1:0,30:30:87.30:1526,87,0	1/1:0,21:21:54.18:947,54,0	1/1:3,15:18:51.11:834,51,0	1/1:0,13:13:33.63:625,34,0	1/1:1,21:22:54.18:932,54,0	1/1:1,16:17:36.02:594,36,0	0/0:28,0:28:84.29:0,84,2025	0/0:27,0:27:81.28:0,81,1992	0/0:36,0:36:99:0,108,2585	1/1:0,31:31:84.29:1475,84,0	1/1:0,27:27:81.27:1398,81,0	1/1:0,22:22:63.22:1104,63,0	1/1:0,13:13:39.13:681,39,0
chr10	54422362	.	ATTG	A	22414.82	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=19.631;DP=686;FS=7.591;HRun=0;HaplotypeScore=213.8696;InbreedingCoeff=0.9998;MQ=70.24;MQ0=0;MQRankSum=-19.534;QD=46.70;ReadPosRankSum=5.650;VQSLOD=5.3350;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:40,0:40:92.62:1742,93,0	1/1:12,0:12:33.11:579,33,0	0/0:16,0:15:45.14:0,45,1049	0/0:29,0:28:81.23:0,81,1677	1/1:31,0:31:81.28:1419,81,0	1/1:24,0:24:69.24:1207,69,0	1/1:19,0:19:51.17:896,51,0	1/1:0,16:16:48.15:824,48,0	1/1:30,0:30:84.29:1478,84,0	1/1:30,0:29:84.28:1443,84,0	1/1:18,0:18:33.11:578,33,0	0/0:28,0:28:84.29:0,84,2027	0/0:42,0:42:99:0,126,2995	1/1:28,0:28:68.90:1165,69,0	1/1:19,0:19:54.18:948,54,0	1/1:31,0:31:90.20:1543,90,0	1/1:21,0:21:54.18:949,54,0	1/1:15,0:15:45.15:790,45,0	1/1:13,0:13:36.12:636,36,0	1/1:22,0:22:54.18:925,54,0	1/1:17,0:17:36.02:596,36,0	0/0:30,0:30:90.31:0,90,2182	0/0:26,0:26:78.27:0,78,1920	0/0:35,0:35:99:0,105,2463	1/1:30,0:30:84.29:1471,84,0	1/1:30,0:30:88.62:1431,89,0	1/1:21,0:21:63.22:1109,63,0	1/1:13,0:13:39.13:685,39,0
chr10	54422898	.	A	AC	2779.81	PASS	AB=0.681;AC=18;AF=0.321;AN=56;BaseQRankSum=-8.857;DP=522;FS=0.421;HRun=10;HaplotypeScore=70.9492;InbreedingCoeff=-0.1834;MQ=77.01;MQ0=2;MQRankSum=0.749;QD=9.52;ReadPosRankSum=0.460;VQSLOD=2.5054;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:14,20:36:99:267,0,107	0/0:3,0:4:8.03:0,8,55	0/0:23,0:23:4.49:0,4,143	0/1:17,1:13:8.40:46,0,8	0/1:7,3:10:45.86:46,0,68	1/1:7,14:21:2.43:231,2,0	0/1:9,11:20:83.61:159,0,84	0/1:13,2:15:26.63:27,0,89	0/1:6,5:11:31.23:110,0,31	0/1:9,6:15:3.59:171,0,4	0/1:5,8:13:13.15:182,0,13	0/0:28,0:28:71.85:0,72,583	0/0:17,0:22:51:0,51,378	0/1:4,15:21:13.38:259,0,13	1/1:5,13:18:2.44:231,2,0	0/0:13,0:13:26.18:0,26,201	0/1:12,19:31:59.83:409,0,60	0/1:12,14:26:99:355,0,112	0/0:5,0:13:16.75:0,17,51	0/0:2,0:25:48.97:0,49,153	0/0:1,0:31:54.99:0,55,159	0/0:11,0:11:26.95:0,27,219	0/0:6,0:8:14.01:0,14,104	0/0:29,0:30:79.88:0,80,637	0/1:7,7:15:29.81:194,0,30	0/1:5,8:13:13.08:197,0,13	0/0:2,0:21:38.70:0,39,112	0/1:1,8:9:15.62:55,0,16
chr10	54423537	.	T	TG	11811.37	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=8.493;DP=681;FS=0.979;HRun=7;HaplotypeScore=97.0506;InbreedingCoeff=0.9988;MQ=86.81;MQ0=0;MQRankSum=-5.169;QD=28.74;ReadPosRankSum=2.428;VQSLOD=4.9168;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:90.14:0,90,869	0/0:6,0:6:18.03:0,18,174	0/0:28,0:28:66.06:0,66,622	0/0:20,0:20:42.46:0,42,386	1/1:7,23:30:63.19:760,63,0	1/1:1,33:34:96.29:1160,96,0	1/1:1,28:29:72.22:870,72,0	1/1:6,17:23:51.11:588,51,0	1/1:3,16:20:38.98:439,39,0	1/1:5,20:25:57.15:675,57,0	1/1:3,18:21:54.16:648,54,0	0/0:24,0:24:57.08:0,57,550	0/0:23,0:23:57.08:0,57,550	1/1:1,19:20:57.17:685,57,0	1/1:3,32:35:78.24:942,78,0	0/0:28,1:29:47.89:0,48,745	0/0:41,0:41:99:0,111,1064	0/0:19,0:19:51.08:0,51,493	1/1:3,13:16:39.12:471,39,0	1/1:6,25:31:69.17:817,69,0	1/1:4,36:39:99:1195,99,0	0/0:21,0:21:60.08:0,60,574	0/0:10,0:10:30.05:0,30,290	0/0:16,0:16:48.08:0,48,464	1/1:5,17:22:45.14:543,45,0	1/1:2,18:20:54.15:640,54,0	1/1:5,27:32:81.16:944,81,0	1/1:1,12:13:36.11:435,36,0
chr10	54425258	.	CA	C	14239.79	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=18.182;DP=788;FS=8.349;HRun=2;HaplotypeScore=95.4283;InbreedingCoeff=0.9955;MQ=83.42;MQ0=0;MQRankSum=-2.683;QD=36.05;ReadPosRankSum=-0.604;VQSLOD=4.4110;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,166,2423	0/0:9,0:9:27.09:0,27,405	0/0:24,0:24:71.72:0,72,1017	0/0:21,0:21:57.15:0,57,800	1/1:1,12:13:36.12:467,36,0	1/1:0,21:21:54.18:701,54,0	1/1:0,24:24:66.21:857,66,0	1/1:0,29:29:87.21:1069,87,0	1/1:0,30:30:84.27:1090,84,0	1/1:0,30:30:87.28:1130,87,0	1/1:1,17:18:48.11:604,48,0	0/0:42,0:42:99:0,126,1889	0/0:48,0:48:99:0,144,2134	1/1:0,32:32:87.28:1130,87,0	1/1:0,46:46:99:1751,135,0	0/0:45,1:46:96.49:0,96,1899	0/0:35,0:34:99:0,102,1528	0/0:24,0:24:69.18:0,69,989	1/1:0,15:15:45.14:571,45,0	1/1:1,19:20:51.17:662,51,0	1/1:0,27:27:71.81:934,72,0	0/0:21,0:21:63.20:0,63,923	0/0:21,0:21:63.21:0,63,944	0/0:47,0:47:99:0,141,2091	1/1:1,27:28:78.25:1012,78,0	1/1:0,30:30:90.25:1131,90,0	1/1:0,28:28:75.24:974,75,0	1/1:0,4:4:12.04:156,12,0
chr10	54426170	.	AT	A	11597.84	PASS	AB=0.857;AC=33;AF=0.589;AN=56;BaseQRankSum=11.705;DP=664;FS=0.000;HRun=6;HaplotypeScore=65.8308;InbreedingCoeff=0.9264;MQ=73.52;MQ0=0;MQRankSum=-2.166;QD=27.61;ReadPosRankSum=0.353;VQSLOD=5.1846;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:41:99:0,108,1371	0/1:5,1:6:17.20:17,0,143	0/0:16,0:16:31.89:0,32,373	0/0:9,0:9:18.06:0,18,224	1/1:0,18:18:54.14:580,54,0	1/1:3,17:20:42.10:451,42,0	1/1:1,23:24:66.17:709,66,0	1/1:3,32:34:93.22:991,93,0	1/1:0,22:22:60.15:644,60,0	1/1:1,45:45:99:1417,132,0	1/1:1,18:19:48.12:516,48,0	0/0:27,0:27:78.25:0,78,1026	0/0:20,0:20:48.16:0,48,631	1/1:3,17:20:45.11:482,45,0	1/1:3,31:34:84.21:903,84,0	0/0:23,0:23:66.18:0,66,836	0/0:21,0:20:54.13:0,54,689	0/0:17,0:17:48.16:0,48,628	1/1:4,23:27:66.16:709,66,0	1/1:1,11:12:36.09:386,36,0	1/1:1,30:31:66.16:709,66,0	0/0:18,0:18:48.16:0,48,626	0/0:18,0:18:48.16:0,48,630	0/0:33,0:33:90.28:0,90,1165	1/1:0,26:26:69.17:742,69,0	1/1:0,24:23:69.14:730,69,0	1/1:1,29:30:78.20:838,78,0	1/1:1,25:26:72.18:773,72,0
chr10	54426291	.	CCTCTGCCT	C	4894.63	PASS	AB=0.811;AC=29;AF=0.518;AN=56;BaseQRankSum=2.233;DP=478;FS=34.872;HRun=0;HaplotypeScore=132.4086;InbreedingCoeff=0.6844;MQ=48.26;MQ0=25;MQRankSum=-3.743;QD=20.23;ReadPosRankSum=-1.333;VQSLOD=2.6731;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:20:24.08:0,24,354	0/0:5,0:4:9.03:0,9,102	0/0:28,0:14:1.62:0,2,51	0/0:28,0:21:25.17:0,25,647	1/1:9,0:8:3.01:53,3,0	0/1:5,10:13:19.15:339,0,19	1/1:20,0:18:7.36:125,7,0	1/1:18,10:26:27.05:391,27,0	1/1:8,9:14:30.06:619,30,0	1/1:10,2:10:18.06:323,18,0	0/1:8,0:6:0:0,0,0	0/0:15,0:15:30.10:0,30,907	0/0:18,0:18:36.12:0,36,1158	0/1:16,4:18:19.11:325,0,19	1/1:9,9:16:30.10:713,30,0	0/0:23,0:23:45.11:0,45,604	0/0:12,0:16:27.07:0,27,396	0/0:17,0:20:36.12:0,36,608	1/1:19,0:13:9.02:121,9,0	1/1:6,1:6:2.97:20,3,0	1/1:12,2:12:6.02:82,6,0	0/0:8,0:7:13.29:0,13,325	0/0:8,0:8:3.01:0,3,72	0/0:38,0:36:87.30:0,87,2936	1/1:9,3:11:14.66:290,15,0	1/1:9,9:17:27.09:514,27,0	1/1:11,3:14:21.07:420,21,0	1/1:4,6:10:24.08:561,24,0
chr10	54426297	.	CCT	C	1019.51	PASS	AB=0.904;AC=15;AF=0.268;AN=56;BaseQRankSum=8.267;DP=468;FS=15.648;HRun=0;HaplotypeScore=103.3562;InbreedingCoeff=-0.2026;MQ=47.83;MQ0=25;MQRankSum=-5.963;QD=5.00;ReadPosRankSum=0.316;VQSLOD=1.2608;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:21:17.65:0,18,607	0/0:5,0:4:12.04:0,12,222	0/0:28,0:14:26.68:0,27,429	0/0:34,0:23:51.10:0,51,751	0/0:9,1:9:5.96:0,6,68	1/1:14,0:12:15.01:127,15,0	0/1:14,4:16:99:105,0,144	0/1:24,0:22:99:132,0,486	0/1:14,2:14:68.95:69,0,136	0/1:8,3:9:87.37:160,0,87	0/0:7,3:8:6.01:0,6,108	0/0:15,0:15:42.14:0,42,745	0/0:17,0:17:48.16:0,48,843	0/1:16,1:16:7.43:7,0,342	0/1:15,0:14:62.18:62,0,119	0/0:23,0:22:63.22:0,63,1092	0/0:21,0:17:30.10:0,30,541	0/0:22,0:21:51.17:0,51,892	0/1:14,1:9:24.21:24,0,148	0/1:6,2:7:7.89:8,0,150	0/1:11,1:11:29.85:36,0,30	0/0:8,0:7:18.06:0,18,320	0/0:9,0:9:7.25:0,7,129	0/0:39,0:37:99:0,108,1887	0/1:9,3:11:82.38:92,0,82	0/1:16,0:15:99:215,0,280	0/1:12,1:13:46.19:46,0,181	0/1:9,1:10:96.74:97,0,114
chr10	54426305	.	C	CCT	1777.06	PASS	AB=0.966;AC=21;AF=0.375;AN=56;BaseQRankSum=3.507;DP=460;FS=8.035;HRun=0;HaplotypeScore=109.3632;InbreedingCoeff=-0.0014;MQ=44.81;MQ0=28;MQRankSum=-4.668;QD=6.97;ReadPosRankSum=2.913;VQSLOD=2.7289;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:22:33.05:0,33,395	0/0:6,0:5:9.03:0,9,110	0/0:21,0:10:8.86:0,9,160	0/1:29,0:17:1.07:1,0,260	1/1:8,0:7:3.01:53,3,0	0/1:14,0:12:57.65:68,0,58	0/1:19,1:19:15.09:15,0,204	0/1:24,0:20:84.75:160,0,85	0/1:16,0:14:41.26:246,0,41	0/1:11,1:10:55.76:56,0,112	0/1:11,0:9:0:0,0,0	0/0:16,0:16:36.08:0,36,465	0/0:15,0:15:39.09:0,39,506	0/1:15,1:14:43.69:157,0,44	1/1:15,0:13:29.67:346,30,0	0/0:24,0:23:57.13:0,57,702	0/0:21,0:17:36.12:0,36,471	0/0:20,0:19:51.15:0,51,663	0/1:15,1:8:61.49:61,0,99	1/1:7,0:7:2.74:14,3,0	0/1:13,2:13:28.02:28,0,56	0/0:9,0:8:14.81:0,15,154	0/0:8,0:8:9.03:0,9,121	0/0:40,0:38:99:0,102,1362	0/1:13,0:12:21.03:124,0,21	0/1:13,0:12:44.67:138,0,45	1/1:6,6:12:17.07:333,17,0	0/1:10,1:11:29:146,0,29
chr10	54426311	.	TGC	T	501.48	PASS	AB=0.973;AC=15;AF=0.268;AN=56;BaseQRankSum=5.532;DP=430;FS=2.473;HRun=0;HaplotypeScore=110.6340;InbreedingCoeff=-0.2147;MQ=46.59;MQ0=30;MQRankSum=-4.286;QD=2.43;ReadPosRankSum=2.177;VQSLOD=2.2506;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:22:38.18:0,38,426	0/0:5,0:4:8.49:0,8,59	0/0:22,0:9:23.84:0,24,375	0/1:32,2:18:64.60:65,0,465	0/1:4,1:4:21.54:22,0,44	0/1:15,0:14:51.23:51,0,153	0/1:15,0:14:11.87:12,0,402	0/1:19,0:14:68.74:69,0,296	0/1:16,0:13:99:124,0,122	0/0:12,0:10:17.91:0,18,299	0/0:8,0:6:2.99:0,3,25	0/0:14,0:14:42.14:0,42,762	0/0:17,0:17:51.13:0,51,927	0/1:12,1:11:13.43:13,0,110	1/1:11,2:11:16.69:111,17,0	0/0:21,0:20:39.89:0,40,584	0/0:22,0:18:39.47:0,39,506	0/0:18,0:17:49.98:0,50,770	0/1:15,0:7:13.47:13,0,192	0/0:7,0:6:4.54:0,5,28	0/1:14,0:10:27.92:28,0,99	0/0:7,0:6:17.95:0,18,314	0/0:8,0:8:9.03:0,9,183	0/0:39,0:37:99:0,111,2183	0/1:13,0:12:17.69:18,0,126	0/1:12,0:11:49.43:49,0,140	0/1:12,0:12:36.64:44,0,37	0/1:9,0:9:42.48:42,0,69
chr10	54426313	.	CCT	C	621.21	PASS	AB=0.922;AC=12;AF=0.214;AN=56;BaseQRankSum=8.921;DP=430;FS=3.176;HRun=0;HaplotypeScore=112.8371;InbreedingCoeff=-0.1682;MQ=49.37;MQ0=30;MQRankSum=-7.118;QD=3.27;ReadPosRankSum=5.499;VQSLOD=1.9199;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:21,3:22:99:140,0,285	0/1:3,2:4:21.56:41,0,22	0/0:21,0:10:26.46:0,26,384	0/1:35,0:19:15.52:16,0,326	0/0:6,0:5:2.92:0,3,52	0/1:16,0:14:38.04:38,0,150	0/0:14,0:13:25.51:0,26,401	0/0:20,0:15:21.63:0,22,359	0/1:14,0:11:23.21:23,0,105	0/0:12,0:10:20.78:0,21,338	0/0:8,0:6:3:0,3,52	0/0:14,0:14:33.11:0,33,575	0/0:17,0:17:45.15:0,45,755	0/1:13,0:11:4.70:5,0,92	1/1:14,0:12:6.95:41,7,0	0/1:17,3:19:99:272,0,313	0/1:18,4:18:97.99:98,0,314	0/1:16,2:17:65.51:66,0,403	0/0:16,0:7:15.05:0,15,221	0/0:7,0:6:5.28:0,5,48	0/0:14,0:10:8.55:0,9,135	0/0:7,0:6:13.59:0,14,255	0/0:8,0:8:9.03:0,9,153	0/0:39,0:37:99:0,108,1824	0/0:13,0:12:1.06:0,1,130	0/0:12,0:11:1.28:0,1,194	0/0:7,0:12:5.50:0,5,138	0/1:9,0:9:26.10:26,0,66
chr10	54426319	.	T	TGC	1490.99	PASS	AB=0.843;AC=5;AF=0.089;AN=56;BaseQRankSum=3.988;DP=426;FS=1.350;HRun=0;HaplotypeScore=120.5359;InbreedingCoeff=-0.1264;MQ=49.07;MQ0=34;MQRankSum=-3.413;QD=16.57;ReadPosRankSum=-0.739;VQSLOD=3.5237;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:18,6:21:99:348,0,288	0/1:3,1:4:34.33:154,0,34	0/0:22,0:11:30.19:0,30,389	0/0:35,0:16:17.70:0,18,350	0/0:5,0:4:3.01:0,3,49	0/0:16,0:14:28.13:0,28,324	0/0:15,0:15:28.26:0,28,458	0/0:22,0:18:36.04:0,36,546	0/0:13,0:10:26.99:0,27,308	0/0:14,0:12:33.10:0,33,500	0/0:8,0:6:3.01:0,3,49	0/0:12,0:12:33.11:0,33,538	0/0:19,0:19:51.14:0,51,769	0/0:9,0:7:21.02:0,21,224	0/0:11,0:10:19.18:0,19,186	0/1:14,7:20:99:516,0,293	0/1:20,1:17:99:290,0,289	0/1:18,2:19:99:299,0,425	0/0:14,0:6:15.05:0,15,239	0/0:7,0:6:5.70:0,6,51	0/0:16,0:10:9:0,9,145	0/0:7,0:7:21.07:0,21,334	0/0:6,0:6:9.03:0,9,145	0/0:38,0:37:99:0,108,1711	0/0:12,0:11:13.69:0,14,195	0/0:12,0:11:26.19:0,26,372	0/0:13,0:13:12.13:0,12,155	0/0:8,0:8:24.03:0,24,260
chr10	54426323	.	CCTGCCT	C	1273.01	PASS	AB=0.912;AC=8;AF=0.143;AN=56;BaseQRankSum=4.576;DP=438;FS=4.997;HRun=0;HaplotypeScore=140.5306;InbreedingCoeff=-0.2018;MQ=49.05;MQ0=34;MQRankSum=-3.179;QD=8.11;ReadPosRankSum=-1.596;VQSLOD=2.2610;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:23,3:23:99:291,0,760	0/1:3,2:5:99:146,0,122	0/0:24,0:11:16.25:0,16,318	0/1:34,0:13:18.69:19,0,193	0/0:5,0:5:3.01:0,3,58	0/0:15,0:14:18.50:0,18,423	0/1:16,0:15:10.69:11,0,394	0/0:20,0:15:39.12:0,39,686	0/0:13,0:10:25.63:0,26,377	0/0:13,0:12:36.01:0,36,560	0/0:8,0:6:2.78:0,3,58	0/0:13,0:12:36.12:0,36,865	0/0:21,0:21:57.15:0,57,1203	0/1:9,0:7:35.20:35,0,153	0/0:12,0:10:16.38:0,16,301	0/1:21,2:22:99:395,0,766	0/1:19,4:19:99:237,0,728	0/1:19,2:20:99:271,0,786	0/0:10,0:6:15.04:0,15,205	0/0:8,0:7:1.99:0,2,23	0/0:14,0:10:9.01:0,9,140	0/0:7,0:7:18.06:0,18,525	0/0:7,0:6:6.02:0,6,164	0/0:43,0:42:99:0,111,2435	0/0:13,0:12:16.35:0,16,251	0/0:11,0:10:27.65:0,28,457	0/0:14,0:14:20.33:0,20,222	0/0:9,0:9:27.08:0,27,412
chr10	54426337	.	C	CCTGG	682.90	PASS	AB=0.994;AC=14;AF=0.250;AN=56;BaseQRankSum=5.893;DP=437;FS=4.895;HRun=0;HaplotypeScore=126.1714;InbreedingCoeff=0.0548;MQ=48.75;MQ0=63;MQRankSum=-5.668;QD=4.22;ReadPosRankSum=-1.704;VQSLOD=1.8363;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:22:97.57:98,0,579	0/1:5,0:4:11.77:12,0,52	0/0:18,0:6:7.54:0,8,134	0/0:25,0:9:3.22:0,3,86	0/0:5,0:5:2.90:0,3,16	0/0:17,0:16:21.46:0,21,450	0/0:15,0:15:2.27:0,2,343	0/0:19,0:10:30.01:0,30,373	0/0:10,0:9:17.91:0,18,226	0/0:11,0:10:0.18:0,0,308	0/0:8,0:5:2.90:0,3,25	0/0:15,0:13:39.12:0,39,708	0/0:22,0:21:60.17:0,60,1064	0/1:6,0:6:26.76:27,0,96	0/1:11,0:8:22.83:23,0,300	0/1:25,0:23:64.32:64,0,786	0/1:24,0:21:4.26:4,0,621	0/0:20,0:23:47.43:0,47,903	1/1:8,3:3:6.02:161,6,0	1/1:6,2:5:3.31:60,3,0	0/1:18,1:13:68.15:68,0,100	0/0:8,0:5:15.05:0,15,290	0/0:6,0:4:3.01:0,3,57	0/0:48,0:46:99:0,120,2109	0/1:10,0:10:7.34:7,0,105	0/0:12,0:7:21.06:0,21,363	1/1:5,4:10:10.24:308,10,0	0/0:9,0:9:15.03:0,15,243
chr10	54426347	.	CCTCTCT	C	105.16	PASS	AB=0.921;AC=11;AF=0.196;AN=56;BaseQRankSum=6.553;DP=451;FS=15.800;HRun=0;HaplotypeScore=134.5041;InbreedingCoeff=0.0579;MQ=51.06;MQ0=78;MQRankSum=-5.259;QD=0.75;ReadPosRankSum=-1.656;VQSLOD=1.5350;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:18:89.77:90,0,748	0/1:3,1:3:1.43:1,0,138	0/1:16,0:5:5.25:17,0,5	0/0:25,0:10:8.24:0,8,116	0/0:4,0:4:3.01:0,3,55	0/0:17,0:16:30.54:0,31,453	0/0:16,0:15:27.67:0,28,477	0/0:21,0:8:24.08:0,24,421	0/0:11,0:10:12.93:0,13,218	0/0:10,0:9:23.75:0,24,341	0/0:9,0:5:3.01:0,3,55	0/0:15,0:13:39.13:0,39,920	0/0:20,0:19:54.18:0,54,1276	0/1:6,0:5:10.39:10,0,97	0/0:15,0:12:26.03:0,26,402	0/1:26,2:24:58.99:59,0,1293	0/0:27,2:27:8.59:0,9,1178	0/1:21,1:23:18.01:18,0,1155	1/1:16,0:3:1.68:14,2,0	1/1:7,0:4:3.06:11,3,0	0/0:21,0:12:7.06:0,7,162	0/0:8,0:4:12.04:0,12,421	0/0:6,0:4:3.01:0,3,108	0/0:52,0:49:99:0,119,2937	0/0:10,0:10:21.07:0,21,311	0/0:12,0:6:18.06:0,18,308	0/1:13,0:13:17.04:17,0,88	0/0:7,0:7:9.03:0,9,196
chr10	54426377	.	CCTCT	C	287.99	PASS	AB=0.953;AC=10;AF=0.179;AN=56;BaseQRankSum=6.912;DP=493;FS=12.269;HRun=0;HaplotypeScore=106.2926;InbreedingCoeff=-0.1325;MQ=53.81;MQ0=48;MQRankSum=-4.657;QD=2.72;ReadPosRankSum=-2.319;VQSLOD=0.9846;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:23:57.13:0,57,1328	0/0:4,0:3:9.03:0,9,224	0/0:35,0:10:2.51:0,3,335	0/0:48,0:20:5.65:0,6,531	0/0:3,0:3:3.01:0,3,63	0/0:5,1:6:8.03:0,8,114	0/1:15,0:10:16.77:17,0,28	0/0:15,0:4:9.03:0,9,113	0/1:12,2:11:55.52:112,0,56	0/1:17,1:8:85.29:85,0,94	1/1:4,0:2:1.55:4,2,0	0/0:16,0:14:36.12:0,36,907	0/0:16,0:16:39.13:0,39,1026	0/1:12,1:10:25.14:83,0,25	0/1:12,2:10:40.55:41,0,88	0/0:31,0:29:77.99:0,78,1681	0/0:28,0:26:66.17:0,66,1570	0/0:30,0:26:56.82:0,57,1316	0/0:18,0:5:9.03:0,9,151	0/1:6,0:5:0.74:1,0,30	0/0:22,0:14:8.70:0,9,84	0/0:9,0:7:21.07:0,21,505	0/0:4,0:4:12.03:0,12,263	0/0:57,0:54:99:0,121,2990	0/1:11,0:9:36.20:36,0,38	0/0:15,0:8:6.02:0,6,70	0/1:11,0:11:38.28:38,0,106	0/0:1,0:1:3.01:0,3,80
chr10	54426383	.	TCTGCCTC	T	3121.66	PASS	AB=1.000;AC=27;AF=0.482;AN=56;BaseQRankSum=6.216;DP=511;FS=1.777;HRun=0;HaplotypeScore=106.3576;InbreedingCoeff=0.7012;MQ=53.20;MQ0=46;MQRankSum=-7.782;QD=17.06;ReadPosRankSum=-0.182;VQSLOD=3.0093;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:24:60.67:0,61,1147	0/0:4,0:3:9.03:0,9,192	0/0:47,0:10:18.98:0,19,234	0/0:58,0:20:8.71:0,9,360	1/1:3,0:3:1.25:3,1,0	0/1:7,0:6:8.91:168,0,9	1/1:14,0:8:9.03:220,9,0	1/1:16,0:5:12.04:285,12,0	1/1:16,0:13:11.91:250,12,0	1/1:19,0:9:19.14:364,19,0	1/1:3,0:1:1.55:4,2,0	0/0:15,0:14:36.12:0,36,716	0/0:16,0:16:39.13:0,39,794	0/1:14,0:10:23.89:125,0,24	1/1:17,0:12:23.33:443,23,0	0/0:30,0:29:54.55:0,55,1372	0/0:32,0:29:71.27:0,71,1432	0/0:27,0:23:54.88:0,55,1057	1/1:14,0:6:13.29:243,13,0	1/1:5,1:5:9:155,9,0	0/1:24,0:14:0.38:1,0,0	0/0:9,0:8:21.07:0,21,467	0/0:5,0:5:15.05:0,15,276	0/0:54,0:53:99:0,124,2436	1/1:11,0:9:18.15:312,18,0	1/1:9,0:5:6.02:137,6,0	1/1:7,3:10:27.09:612,27,0	0/0:1,0:1:3.01:0,3,92
chr10	54426390	.	C	CTCT	2702.97	PASS	AB=0.795;AC=24;AF=0.444;AN=54;BaseQRankSum=5.905;DP=510;FS=17.056;HRun=0;HaplotypeScore=85.0916;InbreedingCoeff=0.6834;MQ=52.64;MQ0=43;MQRankSum=-6.713;QD=12.81;ReadPosRankSum=-2.014;VQSLOD=1.6131;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:24:54.18:0,54,837	0/0:4,0:3:9.03:0,9,154	0/0:58,0:10:16.07:0,16,257	0/1:68,0:20:10.48:10,0,386	0/0:2,1:3:0.47:0,0,1	1/1:6,2:7:8.41:129,8,0	1/1:4,8:5:3.01:69,3,0	1/1:3,10:7:15.05:321,15,0	1/1:4,11:12:10.80:211,11,0	1/1:3,15:8:1.53:306,2,0	./.	0/0:14,0:14:33.58:0,34,538	0/0:15,0:15:33.11:0,33,558	0/1:4,8:10:29:63,0,29	1/1:6,11:13:22.50:340,23,0	0/0:29,0:28:52.18:0,52,988	0/0:28,0:25:70.12:0,70,1160	0/0:24,0:21:43.08:0,43,703	1/1:6,5:9:15.64:387,16,0	1/1:1,5:5:8.98:149,9,0	0/0:26,0:13:8.96:0,9,57	0/0:7,0:7:18.06:0,18,306	0/0:5,0:5:15.05:0,15,255	0/0:58,0:56:99:0,113,1864	1/1:5,5:8:9.03:169,9,0	1/1:1,8:6:9.03:207,9,0	1/1:7,3:10:27.09:537,27,0	0/0:1,0:1:3.01:0,3,32
chr10	54426391	.	TC	T	950.39	PASS	AB=0.897;AC=21;AF=0.375;AN=56;BaseQRankSum=7.052;DP=507;FS=1.327;HRun=1;HaplotypeScore=77.7958;InbreedingCoeff=0.2802;MQ=52.73;MQ0=43;MQRankSum=-3.972;QD=3.20;ReadPosRankSum=0.924;VQSLOD=0.0045;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:24:54.18:0,54,818	0/0:4,0:3:9.03:0,9,144	0/1:58,0:10:22.18:22,0,217	0/1:68,0:20:16.92:17,0,361	0/0:3,0:3:5.03:0,5,30	0/1:5,3:7:14.91:68,0,15	1/1:13,0:5:1.25:3,1,0	0/0:12,0:8:8.68:0,9,45	1/1:12,3:12:4.09:74,4,0	1/1:16,1:7:0.24:44,0,0	0/0:2,0:1:2.99:0,3,23	0/0:14,0:14:35.16:0,35,544	0/0:14,0:14:33.11:0,33,522	0/1:12,1:10:24.74:49,0,25	1/1:13,4:13:17.91:179,18,0	0/1:22,6:28:99:170,0,836	0/0:28,0:25:45.75:0,46,1086	0/0:23,0:21:43.81:0,44,655	0/0:11,0:9:3.59:0,4,49	0/1:7,0:5:0.08:24,0,0	1/1:15,9:13:9.26:126,9,0	0/0:7,0:7:18.06:0,18,287	0/0:5,0:5:15.05:0,15,239	0/0:59,1:57:99:0,111,1740	0/1:6,2:6:41.68:57,0,42	1/1:9,0:6:3.84:10,4,0	1/1:7,3:10:20.49:277,20,0	0/0:1,0:1:3.01:0,3,45
chr10	54426967	.	AT	A	2427.96	PASS	AB=0.911;AC=10;AF=0.179;AN=56;BaseQRankSum=11.680;DP=656;FS=0.399;HRun=9;HaplotypeScore=62.1395;InbreedingCoeff=0.8144;MQ=73.22;MQ0=0;MQRankSum=-1.631;QD=16.86;ReadPosRankSum=2.197;VQSLOD=3.8220;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,120,1366	0/0:10,0:10:30.09:0,30,346	0/0:18,0:18:32.74:0,33,309	0/1:9,1:10:10.15:10,0,105	0/0:30,0:30:78.23:0,78,899	0/0:20,0:20:54.16:0,54,623	0/0:18,0:18:45.13:0,45,519	0/0:40,0:40:99:0,102,1161	0/0:24,0:24:57.16:0,57,648	0/0:31,0:31:78.23:0,78,900	0/1:19,2:21:0.78:1,0,500	0/0:26,0:26:72.19:0,72,812	0/0:24,0:24:63.15:0,63,698	0/0:20,0:20:57.02:0,57,627	0/0:28,0:28:81.23:0,81,924	0/0:18,0:18:51.15:0,51,588	0/0:23,0:24:69.04:0,69,776	0/0:17,0:17:51.14:0,51,580	1/1:4,16:20:48.02:439,48,0	1/1:1,27:28:78.04:714,78,0	1/1:4,20:24:57.02:522,57,0	0/0:20,0:20:60.18:0,60,692	0/0:26,0:26:44.76:0,45,769	0/0:15,0:15:42.12:0,42,485	0/0:29,0:29:81.23:0,81,927	0/0:23,0:23:63.18:0,63,720	1/1:5,36:41:99:906,99,0	0/0:10,0:10:30.04:0,30,305
chr10	54427373	.	G	GGTGTGTGTGT	5995.11	PASS	AC=42;AF=0.808;AN=52;BaseQRankSum=-0.373;DP=585;FS=14.875;HRun=0;HaplotypeScore=196.5388;InbreedingCoeff=0.6119;MQ=57.18;MQ0=16;MQRankSum=-3.330;QD=13.81;ReadPosRankSum=-1.574;VQSLOD=2.8321;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:33,0:32:16.30:373,16,0	1/1:7,0:7:3.01:74,3,0	./.	./.	1/1:25,0:24:2.99:25,3,0	1/1:18,1:19:11.87:413,12,0	1/1:27,0:26:12.46:336,12,0	1/1:27,0:27:5.79:37,6,0	1/1:16,1:17:9.03:413,9,0	1/1:25,0:25:23.43:516,23,0	1/1:16,0:16:3.01:120,3,0	0/0:22,0:25:8.37:0,8,244	0/0:14,0:16:5.80:0,6,139	1/1:18,0:17:15:389,15,0	1/1:15,6:22:12.04:589,12,0	1/1:21,0:26:12.04:321,12,0	1/1:25,5:31:12.04:365,12,0	1/1:16,0:16:18.06:360,18,0	1/1:15,0:14:9.02:251,9,0	1/1:11,0:11:3.01:134,3,0	1/1:29,0:25:11.47:290,11,0	0/0:15,0:16:5.23:0,5,136	0/0:17,0:20:9.49:0,9,206	0/0:31,0:31:11.54:0,12,350	1/1:19,0:19:9.01:159,9,0	1/1:23,0:22:26.33:631,26,0	1/1:22,0:19:5.04:92,5,0	1/1:5,0:4:3.01:105,3,0
chr10	54428896	.	TC	T	4043.88	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=12.061;DP=809;FS=5.754;HRun=4;HaplotypeScore=77.9414;InbreedingCoeff=0.9978;MQ=85.95;MQ0=0;MQRankSum=-3.389;QD=31.35;ReadPosRankSum=2.388;VQSLOD=4.3398;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,144,1910	0/0:17,0:17:51.16:0,51,697	0/0:28,0:28:81.07:0,81,1014	0/0:26,0:26:71.75:0,72,840	0/0:24,0:24:72.24:0,72,1007	0/0:26,0:26:78.24:0,78,1072	0/0:25,0:25:75.25:0,75,1049	0/0:40,0:40:99:0,105,1426	0/0:35,0:35:99:0,105,1414	0/0:30,0:30:84.27:0,84,1148	0/0:25,0:25:75.22:0,75,1014	0/0:33,0:33:99:0,99,1344	0/0:24,0:24:69.11:0,69,919	0/0:23,0:23:66.21:0,66,902	0/0:33,0:33:96.32:0,96,1344	0/0:35,0:35:99:0,99,1353	0/0:42,0:42:99:0,123,1667	0/0:26,0:26:72.20:0,72,985	1/1:3,22:25:66.17:761,66,0	1/1:4,27:31:81.19:945,81,0	1/1:1,31:32:90.28:1079,90,0	0/0:26,0:26:75.24:0,75,1032	0/0:23,0:23:66.21:0,66,895	0/0:27,0:27:75.17:0,75,978	0/0:21,0:21:63.20:0,63,866	0/0:33,0:33:99:0,99,1355	1/1:4,37:41:99:1259,105,0	0/0:7,0:7:18.06:0,18,252
chr10	54429601	.	G	GC	12285.12	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=-15.813;DP=624;FS=11.410;HRun=3;HaplotypeScore=57.9621;InbreedingCoeff=0.9987;MQ=90.59;MQ0=0;MQRankSum=-4.080;QD=36.78;ReadPosRankSum=0.704;VQSLOD=4.6247;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:81.25:0,81,971	0/0:13,0:13:33.09:0,33,384	0/0:22,0:22:60.18:0,60,706	0/0:28,0:28:75.11:0,75,816	1/1:1,16:17:45.15:630,45,0	1/1:0,17:17:51.17:712,51,0	1/1:1,24:25:60.20:840,60,0	1/1:1,25:26:72.24:1007,72,0	1/1:1,16:17:42.14:588,42,0	1/1:0,21:21:63.21:881,63,0	1/1:1,13:14:36.12:504,36,0	0/0:27,0:27:72.22:0,72,864	0/0:31,0:31:93.25:0,93,1091	1/1:1,21:22:57.19:797,57,0	1/1:3,36:39:66.33:1350,66,0	0/0:33,1:34:60.31:0,60,1146	0/0:27,0:27:72.19:0,72,849	0/0:28,0:28:84.22:0,84,991	1/1:2,18:22:57.16:778,57,0	1/1:1,16:17:48.16:671,48,0	1/1:3,23:26:60.20:840,60,0	0/0:10,0:10:30.09:0,30,360	0/0:19,0:19:54.17:0,54,648	0/0:18,0:18:45.10:0,45,524	1/1:2,12:14:36.12:504,36,0	1/1:2,25:27:75.25:1049,75,0	1/1:1,23:24:63.21:882,63,0	1/1:0,6:6:18.06:252,18,0
chr10	54431307	.	C	CA	15555.81	PASS	AB=0.909;AC=33;AF=0.589;AN=56;BaseQRankSum=-16.120;DP=698;FS=3.687;HRun=0;HaplotypeScore=60.8255;InbreedingCoeff=0.9238;MQ=80.62;MQ0=0;MQRankSum=-0.261;QD=37.39;ReadPosRankSum=0.086;VQSLOD=4.7588;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,141,1870	0/0:9,0:9:27.07:0,27,346	0/0:20,0:20:51.12:0,51,640	0/0:16,0:16:29.28:0,29,443	1/1:0,33:33:87.22:1264,87,0	1/1:0,22:22:51.17:761,51,0	1/1:0,30:30:78.26:1166,78,0	1/1:1,32:33:96.24:1334,96,0	1/1:1,24:25:72.24:1065,72,0	1/1:0,32:33:96.31:1406,96,0	1/1:0,21:21:57.19:852,57,0	0/0:27,0:27:72.21:0,72,969	0/0:29,0:29:84.11:0,84,1132	1/1:0,16:17:45.15:662,45,0	1/1:1,29:30:81.27:1212,81,0	0/1:18,2:20:29.48:29,0,693	0/0:23,0:22:66.19:0,66,887	0/0:28,0:28:71.47:0,71,1043	1/1:1,24:26:78.03:1038,78,0	1/1:1,24:25:63.21:934,63,0	1/1:2,29:31:75.25:1122,75,0	0/0:38,0:38:99:0,114,1520	0/0:18,0:18:54.17:0,54,736	0/0:27,0:27:78.24:0,78,1056	1/1:0,23:23:63.21:943,63,0	1/1:0,25:25:75.08:1005,75,0	1/1:1,15:16:36.12:539,36,0	1/1:0,6:6:15.05:224,15,0
chr10	54433051	.	G	GT	11372.70	PASS	AB=0.562;AC=40;AF=0.714;AN=56;BaseQRankSum=-9.857;DP=676;FS=4.698;HRun=9;HaplotypeScore=70.7245;InbreedingCoeff=0.8014;MQ=69.44;MQ0=3;MQRankSum=-1.733;QD=22.75;ReadPosRankSum=2.247;VQSLOD=5.9141;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,24:34:71.69:737,72,0	1/1:3,10:14:24.02:252,24,0	0/0:29,0:21:3.33:0,3,172	0/0:29,0:22:17.44:0,17,214	1/1:10,27:37:78.62:849,79,0	1/1:1,17:18:42.11:465,42,0	1/1:2,18:20:45.12:498,45,0	1/1:5,20:25:60.11:630,60,0	0/1:6,21:27:21:468,0,21	1/1:9,20:28:60.07:621,60,0	1/1:6,13:19:33.09:358,33,0	0/0:21,0:21:50.98:0,51,442	0/0:16,0:16:38.96:0,39,334	0/1:5,17:23:8.47:307,0,8	1/1:3,20:24:34.08:586,34,0	1/1:4,13:17:36.10:398,36,0	1/1:5,29:35:55:818,55,0	1/1:0,26:27:75.15:816,75,0	1/1:2,8:10:18.05:199,18,0	1/1:4,20:24:54.10:582,54,0	1/1:4,16:20:48.05:514,48,0	0/0:21,0:21:62.99:0,63,547	0/0:25,0:25:58.99:0,59,497	0/0:34,0:34:60.43:0,60,673	1/1:3,10:14:20.89:214,21,0	1/1:2,23:25:69.18:755,69,0	1/1:7,30:38:90.16:977,90,0	1/1:4,15:19:30.08:332,30,0
chr10	54433609	.	AAG	A	1572.24	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=10.436;DP=669;FS=3.907;HRun=0;HaplotypeScore=86.9768;InbreedingCoeff=0.8967;MQ=69.17;MQ0=2;MQRankSum=-0.854;QD=20.69;ReadPosRankSum=1.046;VQSLOD=3.9749;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:67.25:0,67,1317	0/0:12,0:12:30.10:0,30,477	0/0:24,0:18:2.65:0,3,333	0/0:31,0:23:17.58:0,18,355	0/0:33,0:33:77.80:0,78,1131	0/0:25,0:25:69.22:0,69,1059	0/0:25,1:26:21.23:0,21,760	0/0:43,0:43:55.20:0,55,1043	0/0:19,0:19:42.14:0,42,664	0/0:22,0:22:38.80:0,39,574	0/0:26,0:26:57.15:0,57,839	0/0:18,1:19:15.21:0,15,684	0/0:23,0:23:55.18:0,55,793	0/0:22,0:22:54.17:0,54,836	0/0:11,0:11:18.06:0,18,287	0/0:19,1:20:12.21:0,12,648	0/0:25,0:25:63.21:0,63,998	0/0:23,0:23:63.10:0,63,898	1/1:6,14:21:47.90:506,48,0	1/1:7,20:27:60.07:682,60,0	1/1:1,4:5:6.02:72,6,0	0/0:20,0:20:39.09:0,39,553	0/0:26,0:26:57.15:0,57,857	0/0:25,1:25:12.49:0,12,652	0/0:29,0:29:72.22:0,72,1098	0/0:33,0:33:87.26:0,87,1288	1/1:4,19:23:37.95:465,38,0	0/0:15,0:15:35.95:0,36,486
chr10	54436041	.	G	GGA	1780.84	PASS	AB=0.592;AC=5;AF=0.089;AN=56;BaseQRankSum=-7.482;DP=638;FS=2.861;HRun=0;HaplotypeScore=85.0189;InbreedingCoeff=0.2926;MQ=62.46;MQ0=9;MQRankSum=-0.156;QD=20.01;ReadPosRankSum=1.986;VQSLOD=4.0414;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:78.05:0,78,916	0/0:5,0:5:12.04:0,12,150	0/0:22,0:13:24.07:0,24,290	0/0:29,0:25:42.90:0,43,461	0/0:16,0:15:45.14:0,45,563	0/0:18,0:19:44.90:0,45,528	0/0:24,0:26:66.04:0,66,801	0/0:35,0:35:69.19:0,69,828	0/0:19,0:20:44.97:0,45,539	0/0:30,0:30:22.44:0,22,777	0/0:15,0:16:44.98:0,45,539	0/0:21,0:21:48.15:0,48,600	0/0:20,0:20:42.13:0,42,520	0/0:25,0:25:63.19:0,63,775	0/0:21,0:22:54:0,54,652	0/0:29,0:28:60.17:0,60,726	0/0:25,0:25:66.21:0,66,824	0/0:23,0:23:60.15:0,60,722	0/1:8,12:21:29.49:518,0,29	0/1:4,13:17:4.41:451,0,4	0/1:9,18:29:44.89:366,0,45	0/0:22,0:22:60.18:0,60,738	0/0:13,0:13:27.06:0,27,313	0/0:27,0:26:52.92:0,53,648	0/0:17,0:16:39.10:0,39,464	0/0:31,0:31:66.20:0,66,813	1/1:5,17:22:1.98:558,2,0	0/0:18,0:16:42.13:0,42,522
chr10	54436957	.	AGTGTGTGTGTGTGT	A	3582.06	PASS	AB=0.869;AC=26;AF=0.520;AN=50;BaseQRankSum=7.822;DP=633;FS=27.081;HRun=0;HaplotypeScore=225.5013;InbreedingCoeff=0.7391;MQ=64.79;MQ0=21;MQRankSum=-6.239;QD=11.23;ReadPosRankSum=0.230;VQSLOD=0.9273;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:32:21.07:0,21,815	0/0:13,0:14:18.06:0,18,587	./.	./.	0/1:28,6:35:2.17:222,0,2	1/1:14,4:20:13.87:432,14,0	1/1:17,0:24:8.07:275,8,0	1/1:24,0:24:2.60:10,3,0	1/1:22,3:24:12.04:411,12,0	0/1:17,2:18:0.22:112,0,0	./.	0/0:19,0:22:23.91:0,24,1267	0/0:14,0:14:15.05:0,15,604	1/1:30,0:28:6.01:108,6,0	1/1:16,7:23:12:369,12,0	0/0:23,0:28:27.07:0,27,885	0/0:23,0:24:30.10:0,30,1011	0/0:17,0:16:28.61:0,29,838	0/0:20,0:19:0:0,0,0	1/1:20,0:25:12.04:338,12,0	1/1:25,0:26:3.01:96,3,0	0/0:18,0:18:12.51:0,13,565	0/0:18,0:18:27.09:0,27,1200	0/0:28,0:28:39.11:0,39,1864	1/1:13,7:20:6.49:194,6,0	1/1:18,6:23:14.45:433,14,0	1/1:9,0:17:15.05:488,15,0	1/1:2,0:2:6.02:94,6,0
chr10	54438351	.	T	TTTTA	2873.70	PASS	AB=0.784;AC=31;AF=0.674;AN=46;BaseQRankSum=-5.925;DP=337;FS=6.792;HRun=0;HaplotypeScore=68.1625;InbreedingCoeff=0.4949;MQ=68.01;MQ0=2;MQRankSum=-3.088;QD=12.72;ReadPosRankSum=-3.451;VQSLOD=0.8471;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:15,11:26:25.91:354,0,26	1/1:6,1:7:3.01:71,3,0	./.	./.	1/1:11,0:14:8.89:83,9,0	1/1:5,0:18:24.08:414,24,0	./.	1/1:35,0:35:29.73:213,30,0	1/1:0,0:1:3.01:52,3,0	1/1:8,1:12:9.03:176,9,0	1/1:8,0:9:3.01:42,3,0	0/0:6,0:6:6.02:0,6,94	0/1:2,0:2:0:0,0,0	1/1:9,1:12:3.01:52,3,0	1/1:6,0:6:6.01:75,6,0	1/1:2,0:2:6:84,6,0	1/1:7,10:17:24:514,24,0	0/1:12,14:24:19.86:540,0,20	0/0:16,0:23:33.04:0,33,307	0/0:5,0:13:21.02:0,21,196	0/0:14,0:15:3:0,3,28	./.	0/0:8,0:8:9.01:0,9,117	./.	1/1:15,0:19:15.05:241,15,0	1/1:16,0:16:6.01:73,6,0	0/0:11,0:21:30.03:0,30,277	1/1:4,0:4:5.98:46,6,0
chr10	54438854	.	C	CA	1733.77	PASS	AB=1.000;AC=12;AF=0.214;AN=56;BaseQRankSum=0.449;DP=527;FS=0.000;HRun=10;HaplotypeScore=55.3306;InbreedingCoeff=0.7979;MQ=59.08;MQ0=8;MQRankSum=0.410;QD=15.91;ReadPosRankSum=-3.089;VQSLOD=2.9443;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:24:52.92:0,53,419	0/0:7,0:7:17.98:0,18,148	1/1:3,0:2:2.98:22,3,0	0/1:7,0:5:6.01:6,0,61	0/0:28,0:29:70.92:0,71,572	0/0:26,0:26:59.93:0,60,492	0/0:18,1:18:13.05:0,13,313	0/0:26,0:25:53.90:0,54,443	0/0:16,0:16:41.95:0,42,345	0/0:18,0:19:55.94:0,56,442	0/0:26,0:25:64.96:0,65,523	0/0:14,0:14:32.96:0,33,271	0/0:12,0:12:20.88:0,21,172	0/0:12,0:12:23.94:0,24,197	0/0:22,0:22:56.86:0,57,456	0/0:19,0:18:41.91:0,42,338	0/0:30,1:31:43.40:0,43,526	0/1:15,0:15:1.57:2,0,231	1/1:5,19:24:35.28:535,35,0	1/1:2,18:21:54.03:541,54,0	1/1:1,12:13:33.08:350,33,0	0/0:20,0:20:41.95:0,42,345	0/0:19,0:19:44.93:0,45,369	0/0:23,0:23:47.44:0,47,393	0/0:19,0:19:50.94:0,51,419	0/0:23,0:23:53.93:0,54,443	1/1:5,20:25:42.10:448,42,0	0/0:11,0:10:26.01:0,26,203
chr10	54442756	.	A	AGTGT	3898.80	PASS	AB=1.000;AC=37;AF=0.685;AN=54;BaseQRankSum=-2.277;DP=484;FS=5.993;HRun=0;HaplotypeScore=119.1039;InbreedingCoeff=0.7182;MQ=56.21;MQ0=11;MQRankSum=0.106;QD=11.33;ReadPosRankSum=-1.672;VQSLOD=2.0172;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,11:27:23.61:489,24,0	1/1:1,5:6:12.04:287,12,0	./.	0/0:28,0:10:9.03:0,9,125	1/1:24,0:23:7.99:130,8,0	1/1:17,0:14:8.61:124,9,0	1/1:29,0:26:12.25:204,12,0	1/1:19,0:18:9.92:160,10,0	1/1:11,0:11:6.02:98,6,0	1/1:15,0:15:12.04:252,12,0	1/1:12,0:9:6.02:112,6,0	0/0:12,0:12:24.08:0,24,381	0/0:10,0:10:18.06:0,18,286	1/1:18,0:17:9.03:157,9,0	1/1:9,0:10:5.81:45,6,0	1/1:7,3:10:5.89:86,6,0	1/1:9,17:29:47.11:935,47,0	1/1:10,6:23:23.29:391,23,0	0/1:10,0:12:43.16:64,0,43	0/0:3,0:16:32.40:0,32,287	0/0:11,0:18:19.74:0,20,170	0/0:10,0:10:12.03:0,12,191	0/0:10,0:10:12.02:0,12,167	1/1:6,0:16:19.15:85,19,0	1/1:25,0:24:1.64:32,2,0	1/1:25,0:24:12.03:200,12,0	0/0:4,0:10:12.01:0,12,112	1/1:12,0:11:5.99:49,6,0
chr10	54443328	.	CT	C	1551.69	PASS	AB=0.770;AC=39;AF=0.696;AN=56;BaseQRankSum=2.195;DP=482;FS=1.220;HRun=16;HaplotypeScore=65.2209;InbreedingCoeff=0.4649;MQ=74.94;MQ0=0;MQRankSum=-0.142;QD=4.17;ReadPosRankSum=5.395;VQSLOD=0.6513;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,13:25:2.67:123,3,0	1/1:3,6:10:16.66:95,17,0	0/1:15,1:15:6.87:7,0,104	0/0:13,1:12:17.39:0,17,116	1/1:8,8:23:36.90:182,37,0	1/1:12,13:26:6.03:142,6,0	0/1:8,5:14:8.54:61,0,9	0/1:14,5:21:9.97:50,0,10	1/1:6,5:14:7.32:91,7,0	1/1:12,8:21:2.19:108,2,0	1/1:3,7:10:11.57:72,12,0	0/0:25,0:27:38.63:0,39,290	0/0:16,1:18:11.85:0,12,191	1/1:7,3:11:7.60:41,8,0	0/1:9,9:19:2.65:91,0,3	1/1:8,12:21:27.65:166,28,0	1/1:11,7:18:11.57:72,12,0	1/1:6,8:14:7.94:52,8,0	1/1:7,0:11:10.02:29,10,0	1/1:9,0:23:26.27:76,26,0	1/1:7,0:17:16.18:47,16,0	0/0:11,0:11:8.89:0,9,64	0/1:9,2:12:2.59:3,0,104	0/0:21,2:23:5.21:0,5,129	0/0:9,7:17:0.89:0,1,2	1/1:13,6:20:10.48:59,10,0	1/1:6,0:16:15.43:44,15,0	1/1:1,6:8:19.67:114,20,0
chr10	54443446	.	CTCAT	C	2711.87	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=9.451;DP=602;FS=5.771;HRun=0;HaplotypeScore=110.6809;InbreedingCoeff=0.8898;MQ=65.92;MQ0=1;MQRankSum=0.175;QD=23.58;ReadPosRankSum=0.660;VQSLOD=3.2129;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:28:38.93:0,39,472	0/0:6,0:14:27:0,27,347	0/0:17,0:16:2.90:0,3,16	0/0:8,0:7:12.04:0,12,218	0/0:24,0:24:42.11:0,42,917	0/0:26,0:26:45.12:0,45,953	0/0:20,0:20:27.09:0,27,625	0/0:24,0:24:42.13:0,42,927	0/0:21,0:21:36.12:0,36,871	0/0:24,0:24:54.17:0,54,1220	0/0:20,0:20:45.15:0,45,1066	0/0:28,0:28:51.15:0,51,1140	0/0:11,0:11:21.07:0,21,509	0/0:19,0:19:36.12:0,36,829	0/0:31,0:31:75.23:0,75,1707	0/0:8,0:20:24:0,24,367	0/0:9,0:16:17.91:0,18,215	0/0:6,0:12:3.01:0,3,52	1/1:11,8:19:24.06:350,24,0	1/1:7,16:23:46.82:672,47,0	1/1:9,24:33:57.19:924,57,0	0/0:23,0:23:45.12:0,45,985	0/0:18,0:18:39.13:0,39,930	0/0:26,0:26:51.14:0,51,1138	0/0:28,0:27:63.19:0,63,1393	0/0:22,0:22:42.14:0,42,1012	1/1:14,26:40:57.19:925,57,0	0/0:6,0:6:12.04:0,12,267
chr10	54444044	.	A	ACCC	2493.12	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-6.109;DP=608;FS=8.684;HRun=7;HaplotypeScore=87.9049;InbreedingCoeff=0.9861;MQ=80.36;MQ0=0;MQRankSum=-2.557;QD=31.56;ReadPosRankSum=-2.596;VQSLOD=1.2324;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:72.20:0,72,965	0/0:9,0:9:24.07:0,24,312	0/0:19,0:19:36.08:0,36,476	0/0:14,0:14:10.94:0,11,487	0/0:35,0:35:93.21:0,93,1246	0/0:30,0:30:84.22:0,84,1097	0/0:27,0:27:63.10:0,63,772	0/0:26,0:26:51.13:0,51,681	0/0:21,0:21:48.14:0,48,654	0/0:22,0:22:54.16:0,54,737	0/0:16,0:16:48.16:0,48,654	0/0:22,0:22:60.19:0,60,813	0/0:20,0:20:54.17:0,54,737	0/0:27,0:27:63.17:0,63,859	0/0:19,0:19:57.18:0,57,762	0/0:19,0:19:51.16:0,51,696	0/0:17,0:17:42.13:0,42,572	0/0:25,0:25:69.22:0,69,931	1/1:7,7:17:30.07:524,30,0	1/1:4,15:20:39.05:655,39,0	1/1:3,6:11:17.93:295,18,0	0/0:23,0:23:57.13:0,57,728	0/0:23,0:23:66.21:0,66,897	0/0:18,0:18:51.15:0,51,679	0/0:23,0:23:66.22:0,66,900	0/0:29,0:29:78.22:0,78,1035	1/1:7,23:29:56.74:1178,57,0	0/0:14,0:14:42.14:0,42,573
chr10	54445219	.	A	AGTGT	3477.46	PASS	AB=0.904;AC=32;AF=0.667;AN=48;BaseQRankSum=3.447;DP=633;FS=9.537;HRun=0;HaplotypeScore=144.9403;InbreedingCoeff=0.3401;MQ=69.35;MQ0=11;MQRankSum=-3.169;QD=8.14;ReadPosRankSum=-2.758;VQSLOD=1.9363;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:36,1:36:21.03:351,21,0	0/1:12,0:13:16.80:26,0,17	./.	./.	1/1:18,0:18:11.98:165,12,0	1/1:22,0:22:6.49:118,6,0	1/1:25,0:24:2.99:24,3,0	1/1:34,0:34:27.02:421,27,0	1/1:12,0:11:5.96:116,6,0	1/1:33,0:31:27.56:457,28,0	./.	0/0:24,0:24:36.12:0,36,533	0/0:14,0:13:15.52:0,16,214	1/1:15,0:15:3.01:70,3,0	1/1:20,0:20:9.01:124,9,0	0/1:7,1:11:77.28:77,0,98	0/1:29,0:29:5.52:188,0,6	1/1:23,4:27:31.83:514,32,0	1/1:17,0:16:5.70:30,6,0	0/1:19,0:21:12.65:13,0,47	0/1:26,4:33:65.04:65,0,156	0/0:21,0:21:14.30:0,14,201	0/0:15,0:19:17.63:0,18,335	0/0:26,0:28:36.10:0,36,505	./.	1/1:29,0:29:39.54:671,40,0	0/1:20,0:20:6.23:6,0,160	1/1:6,0:5:3.01:41,3,0
chr10	54446056	.	G	GC	22192.02	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=-12.622;DP=752;FS=1.338;HRun=1;HaplotypeScore=70.9309;InbreedingCoeff=0.9659;MQ=87.60;MQ0=0;MQRankSum=-6.389;QD=40.20;ReadPosRankSum=1.151;VQSLOD=5.4982;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,49:50:99:1884,127,0	1/1:0,7:7:15.05:225,15,0	0/0:25,0:25:62.43:0,62,752	0/0:26,0:26:75.19:0,75,925	1/1:1,38:39:99:1582,108,0	1/1:1,26:27:72.24:1078,72,0	1/1:0,34:34:99:1482,99,0	1/1:0,25:24:72.20:1018,72,0	1/1:0,24:24:63.21:943,63,0	1/1:1,39:40:99:1685,117,0	1/1:1,15:16:45.15:674,45,0	0/0:28,0:28:84.15:0,84,1043	0/0:32,0:32:96.30:0,96,1229	1/1:1,24:25:72.24:1078,72,0	1/1:1,30:31:87.29:1302,87,0	1/1:0,30:30:81.27:1213,81,0	1/1:1,29:30:84.28:1258,84,0	1/1:1,15:16:42.14:627,42,0	1/1:3,9:12:30.09:429,30,0	1/1:2,42:44:99:1693,120,0	1/1:1,20:21:51.17:764,51,0	0/0:30,0:30:84.27:0,84,1085	0/0:24,0:24:69.22:0,69,889	0/0:35,0:35:99:0,105,1342	1/1:0,22:22:63.21:944,63,0	1/1:4,29:33:84.25:1239,84,0	1/1:0,23:24:69.23:1029,69,0	1/1:0,2:2:3.01:45,3,0
chr10	54447782	.	AAC	A	1552.93	PASS	AB=1.000;AC=11;AF=0.204;AN=54;BaseQRankSum=6.368;DP=642;FS=0.574;HRun=0;HaplotypeScore=106.3163;InbreedingCoeff=0.8597;MQ=59.13;MQ0=7;MQRankSum=2.029;QD=14.93;ReadPosRankSum=3.023;VQSLOD=3.6683;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,21:29:33.10:403,33,0	1/1:2,2:4:9.03:110,9,0	0/0:37,0:20:38.85:0,39,535	0/0:52,0:33:57.17:0,57,765	0/0:20,0:19:45.14:0,45,694	0/0:19,0:19:33.10:0,33,512	0/0:24,1:25:42.13:0,42,656	0/0:35,0:35:23.50:0,23,805	0/0:20,0:20:48.16:0,48,778	0/0:23,1:23:8.43:0,8,596	0/0:14,0:14:21.06:0,21,318	0/0:24,0:24:51.17:0,51,827	0/0:19,0:19:39.13:0,39,621	0/0:20,0:20:27.04:0,27,380	0/0:28,0:28:49.66:0,50,801	1/1:6,11:17:33.10:403,33,0	1/1:15,8:22:30.09:363,30,0	1/1:8,10:17:36.11:440,36,0	0/0:10,0:10:5.21:0,5,30	./.	0/0:28,0:27:6.61:0,7,35	0/0:25,0:25:54.17:0,54,836	0/0:33,1:34:38.60:0,39,1124	0/0:25,0:25:42.13:0,42,656	0/0:17,0:17:30.08:0,30,442	0/0:30,1:31:35.58:0,36,1079	0/1:13,0:13:1.09:1,0,34	0/0:10,0:10:30.06:0,30,458
chr10	54447790	.	CACACACACACGT	C	675.48	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=4.001;DP=649;FS=11.028;HRun=0;HaplotypeScore=214.3497;InbreedingCoeff=0.5165;MQ=53.03;MQ0=13;MQRankSum=-5.848;QD=3.95;ReadPosRankSum=-3.002;VQSLOD=1.0949;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:27.16:0,27,220	0/0:3,0:3:8.13:0,8,57	0/1:34,0:17:11.68:12,0,295	0/1:50,0:31:98.93:99,0,616	0/0:21,0:20:44.74:0,45,1534	0/0:19,0:19:31.85:0,32,1206	0/0:27,0:27:21.34:0,21,1222	0/0:37,0:36:69.23:0,69,1419	0/0:22,0:21:51:0,51,1209	0/0:25,0:23:48.12:0,48,1714	0/0:16,0:16:21.07:0,21,675	0/0:27,0:27:59.87:0,60,1971	0/0:21,0:20:44.68:0,45,1202	0/0:23,0:22:6.17:0,6,651	0/0:31,0:29:51.13:0,51,1657	0/0:17,0:16:19.37:0,19,85	0/0:21,0:20:1.71:0,2,94	0/1:18,0:17:85.96:86,0,90	1/1:7,0:6:9.02:194,9,0	1/1:5,16:21:3.01:35,3,0	1/1:28,0:27:7.56:63,8,0	0/0:24,0:24:45.15:0,45,1460	0/0:31,0:31:71.98:0,72,2008	0/0:26,0:26:45.58:0,46,1668	0/0:18,0:18:30.10:0,30,907	0/0:31,0:31:67.49:0,67,2330	1/1:11,2:13:20.84:341,21,0	0/0:11,0:11:24.34:0,24,704
chr10	54447800	.	CGT	C	567.69	PASS	AB=0.982;AC=14;AF=0.250;AN=56;BaseQRankSum=5.989;DP=602;FS=1.256;HRun=0;HaplotypeScore=115.2620;InbreedingCoeff=0.4199;MQ=50.26;MQ0=16;MQRankSum=-4.818;QD=2.94;ReadPosRankSum=-2.536;VQSLOD=2.1098;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,1:24:25.65:0,26,92	0/1:3,0:3:1.22:1,0,9	0/0:28,0:12:26.56:0,27,371	0/1:37,2:23:60.66:61,0,500	0/0:20,0:19:35.81:0,36,566	0/0:18,0:18:34.82:0,35,614	0/0:27,1:28:20.14:0,20,678	0/0:33,0:31:88.08:0,88,1262	0/0:24,0:22:52.78:0,53,800	0/0:23,0:21:30.90:0,31,820	0/0:12,1:13:21.07:0,21,355	0/0:25,0:25:11.68:0,12,950	0/1:23,0:22:12.44:12,0,587	0/1:24,1:24:20.75:21,0,351	0/0:27,1:26:34.58:0,35,831	0/0:15,0:14:9.28:0,9,51	0/1:14,0:13:2.64:3,0,30	0/1:15,0:14:10.33:10,0,26	1/1:3,4:5:12.03:152,12,0	1/1:16,4:20:3.01:35,3,0	1/1:22,7:28:12.02:146,12,0	0/0:17,2:19:45.15:0,45,775	0/0:24,0:24:71.97:0,72,1205	0/0:28,0:28:54.10:0,54,923	0/0:18,2:19:24.89:0,25,452	0/0:26,2:28:9.27:0,9,1168	1/1:8,9:17:23.91:288,24,0	0/0:11,0:11:21.47:0,21,478
chr10	54447801	.	GTA	G	133.01	PASS	AB=0.973;AC=12;AF=0.214;AN=56;BaseQRankSum=5.633;DP=597;FS=14.032;HRun=0;HaplotypeScore=116.9203;InbreedingCoeff=0.5412;MQ=50.17;MQ0=16;MQRankSum=-5.373;QD=0.73;ReadPosRankSum=-0.635;VQSLOD=1.4089;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:32.87:0,33,254	0/0:3,0:3:8.84:0,9,60	0/0:26,0:10:20.22:0,20,209	0/1:40,0:23:1.50:1,0,272	0/1:20,0:19:5.08:5,0,483	0/0:18,0:18:38.91:0,39,558	0/1:25,1:27:7.51:8,0,546	0/0:33,0:31:90.09:0,90,1165	0/0:24,0:22:50.84:0,51,612	0/0:22,1:21:37.52:0,38,829	0/0:12,1:13:21.03:0,21,310	0/0:25,0:25:45.90:0,46,912	0/0:23,0:22:15.28:0,15,518	0/1:24,1:24:11.49:11,0,325	0/0:28,0:26:30.79:0,31,666	0/0:14,0:13:29.53:0,30,212	0/0:14,0:13:21.59:0,22,153	0/0:15,0:14:32.63:0,33,222	1/1:7,0:5:11.77:74,12,0	1/1:20,0:20:2.92:17,3,0	1/1:29,0:28:8.31:49,8,0	0/0:18,0:18:44.99:0,45,596	0/0:24,0:24:71.99:0,72,953	0/0:27,0:27:51.12:0,51,930	0/0:22,0:21:6.32:0,6,413	0/0:28,0:28:55.69:0,56,1008	1/1:15,0:15:17.66:119,18,0	0/0:12,0:12:31.49:0,31,374
chr10	54447802	.	TAC	T	87.39	PASS	AB=0.962;AC=10;AF=0.179;AN=56;BaseQRankSum=3.750;DP=613;FS=3.750;HRun=0;HaplotypeScore=121.5686;InbreedingCoeff=0.2248;MQ=49.62;MQ0=17;MQRankSum=0.237;QD=0.57;ReadPosRankSum=0.816;VQSLOD=2.3238;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:23:0.67:2,1,0	0/0:7,0:7:4.44:0,4,47	0/0:26,0:10:9.50:0,10,123	0/0:40,0:23:0.76:0,1,1	0/1:20,0:19:68.27:68,0,361	0/0:18,0:18:27.08:0,27,397	0/1:28,1:29:46.79:47,0,320	0/0:31,0:29:48.15:0,48,709	0/0:24,0:22:21.06:0,21,306	0/0:23,0:21:41.28:0,41,602	0/0:13,0:13:12.04:0,12,185	0/0:27,0:27:17.84:0,18,663	0/0:22,1:22:12.82:0,13,337	0/1:25,1:25:20.56:21,0,175	0/0:28,0:26:26.82:0,27,377	0/0:13,0:12:1.57:0,2,6	0/0:17,0:16:1.46:0,1,18	1/1:15,0:14:2.35:12,2,0	0/0:8,0:6:0.06:0,0,0	0/0:21,0:21:3.01:0,3,44	0/0:33,0:32:1.25:0,1,3	0/0:18,0:18:21.05:0,21,311	0/0:23,0:23:33.09:0,33,482	0/0:29,0:28:45.13:0,45,713	0/1:21,2:21:47.25:47,0,254	0/0:26,0:26:41.13:0,41,579	1/1:17,0:17:2.11:10,2,0	0/0:12,0:12:17.92:0,18,215
chr10	54447826	.	TACAC	T	2513.70	PASS	AB=0.893;AC=28;AF=0.538;AN=52;BaseQRankSum=-1.346;DP=629;FS=1.261;HRun=0;HaplotypeScore=141.6079;InbreedingCoeff=0.6485;MQ=47.88;MQ0=20;MQRankSum=0.269;QD=6.81;ReadPosRankSum=2.688;VQSLOD=2.1540;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:20.78:0,21,192	0/0:5,0:10:10.92:0,11,224	./.	./.	1/1:15,5:20:18.05:266,18,0	1/1:9,10:19:6.89:139,7,0	1/1:16,16:32:12.92:172,13,0	1/1:27,6:30:20.96:281,21,0	1/1:10,9:17:11.57:170,12,0	1/1:20,9:28:30.41:401,30,0	1/1:14,3:16:6.02:83,6,0	0/0:27,0:27:30.10:0,30,601	0/0:22,0:21:36.12:0,36,800	1/1:12,16:28:17.58:249,18,0	1/1:21,5:25:29.31:398,29,0	0/0:16,0:27:24.47:0,24,271	0/0:23,0:22:17.87:0,18,134	0/1:15,0:27:13.49:13,0,121	0/0:18,0:16:23.56:0,24,349	0/0:27,0:26:26:0,26,356	0/0:41,0:41:12.04:0,12,180	0/0:16,0:16:5.64:0,6,301	0/1:11,0:13:0:0,0,0	0/1:17,1:28:30.88:31,0,45	1/1:9,6:20:12.04:190,12,0	1/1:15,8:21:11.39:275,11,0	0/1:20,0:21:9.36:9,0,88	1/1:4,0:5:3:28,3,0
chr10	54449354	.	TG	T	1541.10	PASS	AB=0.907;AC=45;AF=0.804;AN=56;BaseQRankSum=8.462;DP=603;FS=2.314;HRun=11;HaplotypeScore=139.2533;InbreedingCoeff=0.5576;MQ=72.51;MQ0=2;MQRankSum=-3.068;QD=2.94;ReadPosRankSum=4.415;VQSLOD=0.1777;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:30:21.79:54,22,0	1/1:13,0:13:17.83:51,18,0	0/1:20,0:18:16.61:17,0,184	0/0:12,1:10:11.91:0,12,92	1/1:36,0:36:50.97:144,51,0	1/1:15,0:15:16.29:47,16,0	1/1:26,0:26:34.18:98,34,0	1/1:15,1:16:22.67:67,23,0	1/1:22,0:22:36.63:107,37,0	1/1:15,0:14:14.71:42,15,0	1/1:21,0:21:25.30:70,25,0	0/1:15,2:17:22.23:22,0,189	0/0:17,1:18:5.43:0,5,263	1/1:16,0:16:7.77:51,8,0	1/1:25,0:25:38.22:110,38,0	1/1:19,0:19:1.34:31,1,0	1/1:30,0:29:23.52:66,24,0	1/1:19,0:18:18.08:46,18,0	1/1:16,0:16:16.21:47,16,0	1/1:33,0:33:45.96:132,46,0	1/1:17,0:17:30.56:89,31,0	0/0:17,0:17:14.09:0,14,149	0/1:19,5:24:37.65:38,0,235	0/0:28,1:29:41.47:0,41,627	1/1:25,0:25:29.73:83,30,0	1/1:30,0:30:42.75:123,43,0	1/1:29,0:28:46.37:134,46,0	1/1:9,0:9:14.26:42,14,0
chr10	54449362	.	GGGGT	G	6591.68	PASS	AB=0.944;AC=33;AF=0.589;AN=56;BaseQRankSum=0.745;DP=573;FS=20.209;HRun=0;HaplotypeScore=144.8774;InbreedingCoeff=0.8838;MQ=72.70;MQ0=2;MQRankSum=-0.246;QD=18.89;ReadPosRankSum=4.184;VQSLOD=3.3003;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:47.08:0,47,158	0/0:14,0:14:27.61:0,28,93	0/0:21,0:18:41.94:0,42,706	0/0:15,0:10:17.63:0,18,345	1/1:34,0:34:66.92:332,67,0	1/1:15,0:15:4.10:106,4,0	1/1:23,0:23:48.04:235,48,0	1/1:16,1:17:46.91:308,47,0	1/1:22,0:22:50.80:248,51,0	1/1:13,0:12:28.20:153,28,0	1/1:20,0:20:38.13:212,38,0	0/0:16,0:16:39.13:0,39,840	0/0:15,0:15:39.08:0,39,903	1/1:16,0:16:4.46:124,4,0	1/1:26,0:26:53.53:261,54,0	0/0:19,0:19:19.92:0,20,146	0/0:29,0:28:25.68:0,26,126	0/1:16,1:16:36.07:36,0,60	1/1:1,11:12:35.93:502,36,0	1/1:3,26:29:78.04:1299,78,0	1/1:0,19:19:48.11:853,48,0	0/0:14,0:14:32.82:0,33,657	0/0:24,0:24:59.96:0,60,1148	0/0:25,0:25:72.22:0,72,1802	1/1:21,0:21:44.65:226,45,0	1/1:23,1:24:42.06:331,42,0	1/1:1,28:29:69.05:1262,69,0	1/1:12,0:12:21.70:104,22,0
chr10	54449363	.	GGGT	G	11637.21	PASS	AB=0.950;AC=41;AF=0.732;AN=56;BaseQRankSum=6.552;DP=564;FS=8.232;HRun=0;HaplotypeScore=115.6710;InbreedingCoeff=0.9204;MQ=72.15;MQ0=2;MQRankSum=-3.155;QD=26.69;ReadPosRankSum=6.575;VQSLOD=4.0860;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:32,0:32:46.76:165,47,0	1/1:14,0:14:24.28:94,24,0	0/0:21,0:18:41.30:0,41,561	0/0:15,0:10:17.55:0,18,271	1/1:3,30:33:81.22:1224,81,0	1/1:1,13:14:27.05:407,27,0	1/1:1,22:23:51.17:823,51,0	1/1:2,15:17:51.06:646,51,0	1/1:1,21:22:54.18:871,54,0	1/1:0,13:13:30.06:430,30,0	1/1:7,12:19:52.32:732,52,0	0/0:16,0:16:39.10:0,39,660	0/0:14,0:14:39.07:0,39,748	1/1:1,14:15:26.41:554,26,0	1/1:2,23:25:57.19:915,57,0	0/1:18,1:19:7.07:93,0,7	1/1:27,2:28:56.95:276,57,0	1/1:16,1:16:35.44:184,35,0	1/1:11,1:12:30.87:316,31,0	1/1:26,0:29:77.72:670,78,0	1/1:19,0:19:48.01:441,48,0	0/0:13,0:13:32.55:0,33,527	0/0:25,0:25:62.91:0,63,942	0/0:24,0:24:69.21:0,69,1452	1/1:2,18:20:48.16:763,48,0	1/1:2,21:23:66.18:1020,66,0	1/1:28,0:28:68.57:632,69,0	1/1:1,11:12:24.08:381,24,0
chr10	54449364	.	GGT	G	9256.65	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=8.733;DP=563;FS=8.527;HRun=0;HaplotypeScore=114.5307;InbreedingCoeff=0.9974;MQ=73.01;MQ0=2;MQRankSum=-4.644;QD=21.38;ReadPosRankSum=6.240;VQSLOD=4.6066;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,25:30:66.20:885,66,0	1/1:4,10:14:38.34:507,38,0	0/0:22,0:19:42.45:0,42,429	0/0:15,0:10:17.62:0,18,240	1/1:30,1:33:79.73:602,80,0	1/1:13,0:14:26.86:199,27,0	1/1:22,0:23:50.76:380,51,0	1/1:17,0:17:50.72:381,51,0	1/1:21,0:22:53.75:403,54,0	1/1:13,0:12:29.82:222,30,0	1/1:16,0:19:53.54:386,54,0	0/0:16,0:16:38.88:0,39,514	0/0:13,0:13:35.97:0,36,568	1/1:15,0:15:37.29:261,37,0	1/1:23,0:25:56.68:421,57,0	1/1:5,14:19:34.30:429,34,0	1/1:8,21:28:75.20:986,75,0	1/1:3,13:15:42.09:542,42,0	1/1:12,0:12:32.87:253,33,0	1/1:29,0:29:77.07:538,77,0	1/1:19,0:19:47.70:351,48,0	0/0:14,0:14:30.08:0,30,437	0/0:26,0:26:64.53:0,65,776	0/0:24,0:24:69.11:0,69,1162	1/1:18,0:20:47.65:347,48,0	1/1:22,1:23:65.69:493,66,0	1/1:29,0:28:68.10:496,68,0	1/1:11,0:12:23.76:173,24,0
chr10	54451045	.	AAG	A	4593.35	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=12.874;DP=667;FS=0.387;HRun=0;HaplotypeScore=77.3995;InbreedingCoeff=0.9998;MQ=83.93;MQ0=1;MQRankSum=-0.304;QD=39.94;ReadPosRankSum=3.263;VQSLOD=6.9851;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:87.30:0,87,1628	0/0:14,0:14:39.13:0,39,723	0/0:19,0:19:53.86:0,54,883	0/0:19,0:19:51.17:0,51,951	0/0:35,0:35:99:0,102,1909	0/0:17,0:17:48.16:0,48,886	0/0:20,0:20:60.21:0,60,1119	0/0:30,0:30:84.26:0,84,1461	0/0:18,0:18:54.19:0,54,1011	0/0:36,0:36:99:0,105,1927	0/0:18,0:18:54.19:0,54,1003	0/0:20,0:20:60.19:0,60,1092	0/0:21,0:21:57.17:0,57,1005	0/0:27,0:27:78.24:0,78,1398	0/0:23,0:23:63.22:0,63,1180	0/0:25,0:25:75.23:0,75,1334	0/0:25,0:25:75.24:0,75,1372	0/0:13,0:13:33.11:0,33,606	1/1:0,12:12:36.12:530,36,0	1/1:0,35:34:96.32:1414,96,0	1/1:1,37:38:99:1502,102,0	0/0:27,0:27:81.26:0,81,1472	0/0:22,0:22:63.22:0,63,1178	0/0:19,0:19:57.18:0,57,1035	0/0:28,0:28:81.28:0,81,1504	0/0:33,0:33:96.32:0,96,1736	1/1:0,30:30:78.19:1148,78,0	0/0:11,0:11:33.03:0,33,486
chr10	54452222	.	G	GT	7968.87	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-14.265;DP=635;FS=0.644;HRun=8;HaplotypeScore=57.9293;InbreedingCoeff=0.9987;MQ=87.04;MQ0=0;MQRankSum=-3.875;QD=28.87;ReadPosRankSum=0.488;VQSLOD=4.9441;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:57.02:0,57,522	0/0:11,0:10:33.01:0,33,298	0/0:28,0:28:29.29:0,29,433	0/0:18,0:17:34.34:0,34,298	1/1:1,26:28:80.89:854,81,0	1/1:2,24:26:63.19:727,63,0	1/1:1,15:16:42.12:485,42,0	1/1:5,18:23:57.07:621,57,0	1/1:1,20:22:60.04:673,60,0	1/1:3,27:30:56.75:886,57,0	1/1:2,19:21:54.12:603,54,0	0/0:17,0:17:41.97:0,42,376	0/0:33,0:33:90.03:0,90,819	1/1:3,23:26:69.20:790,69,0	1/1:2,19:21:29.71:596,30,0	0/0:23,0:23:63.03:0,63,577	0/0:16,0:16:33.01:0,33,302	0/0:27,0:27:62.93:0,63,560	0/0:14,0:14:35.98:0,36,321	0/0:27,1:28:49.18:0,49,584	0/0:20,0:20:54.01:0,54,489	0/0:26,0:26:66.03:0,66,604	0/0:28,0:28:75.02:0,75,681	0/0:11,0:11:23.98:0,24,214	1/1:3,24:28:20.12:721,20,0	1/1:5,18:23:54.11:598,54,0	0/0:36,1:36:67.34:0,67,854	1/1:0,12:12:36.11:415,36,0
chr10	54452923	.	TACAC	T	863.22	PASS	AB=0.871;AC=23;AF=0.500;AN=46;BaseQRankSum=2.712;DP=375;FS=7.466;HRun=0;HaplotypeScore=81.9147;InbreedingCoeff=0.1273;MQ=66.55;MQ0=7;MQRankSum=0.167;QD=4.40;ReadPosRankSum=1.721;VQSLOD=0.7872;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:24,4:28:18.05:40,0,18	1/1:6,0:6:3.01:40,3,0	./.	./.	0/1:10,0:14:15.84:36,0,16	0/1:12,0:12:35.05:35,0,102	1/1:10,1:10:3.01:47,3,0	./.	1/1:7,3:10:12.04:184,12,0	0/1:12,0:12:34.48:34,0,53	0/0:10,0:14:8.23:0,8,37	0/0:7,0:8:5.75:0,6,54	0/0:13,0:13:8.78:0,9,93	./.	0/1:9,0:11:19.13:19,0,50	1/1:10,2:12:3.01:46,3,0	1/1:16,5:21:12.04:185,12,0	1/1:17,4:20:6.01:92,6,0	./.	1/1:7,4:13:2.61:140,3,0	0/0:14,0:12:0:0,0,0	0/0:8,0:8:6.02:0,6,89	0/0:6,0:12:8.39:0,8,137	0/0:20,0:21:26.81:0,27,407	0/1:4,0:6:6.43:22,0,6	0/0:13,0:13:3.22:0,3,13	1/1:6,1:8:6.48:75,6,0	0/1:9,0:10:16.40:16,0,33
chr10	54453630	.	A	AC	21992.67	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=16.941;DP=692;FS=1.437;HRun=0;HaplotypeScore=148.5902;InbreedingCoeff=0.9984;MQ=84.37;MQ0=0;MQRankSum=-8.226;QD=42.38;ReadPosRankSum=3.729;VQSLOD=4.1375;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,31:31:81.28:1282,81,0	1/1:0,16:16:39.13:618,39,0	0/0:32,0:32:93.27:0,93,1206	0/0:17,0:17:45.02:0,45,549	1/1:0,24:24:57.19:903,57,0	1/1:0,16:16:45.15:715,45,0	1/1:0,21:21:60.20:938,60,0	1/1:1,22:23:63.20:975,63,0	1/1:0,35:35:90.31:1431,90,0	1/1:1,25:27:75.23:1135,75,0	1/1:0,20:20:54.18:851,54,0	0/0:29,0:29:84.27:0,84,1156	0/0:24,0:24:72.24:0,72,1006	1/1:0,27:27:75.26:1191,75,0	1/1:1,30:31:84.29:1335,84,0	1/1:0,23:23:60.20:953,60,0	1/1:0,31:31:93.32:1481,93,0	1/1:1,13:14:36.12:573,36,0	1/1:1,17:18:51.17:810,51,0	1/1:0,26:26:72.23:1107,72,0	1/1:2,49:51:99:2098,132,0	0/0:11,0:11:33.10:0,33,445	0/0:28,0:28:81.26:0,81,1130	0/0:32,0:31:96.32:0,96,1342	1/1:1,19:20:48.16:758,48,0	1/1:1,32:33:96.33:1505,96,0	1/1:0,26:26:66.22:1048,66,0	1/1:0,6:6:18.06:284,18,0
chr10	54453859	.	AG	A	13245.05	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=13.325;DP=752;FS=0.000;HRun=1;HaplotypeScore=79.4265;InbreedingCoeff=0.9994;MQ=88.16;MQ0=0;MQRankSum=-4.121;QD=40.02;ReadPosRankSum=0.059;VQSLOD=5.1388;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,160,2506	0/0:7,0:7:21.07:0,21,332	0/0:20,0:20:60.20:0,60,938	0/0:34,0:34:99:0,99,1570	1/1:0,24:24:69.23:963,69,0	1/1:0,17:17:51.17:713,51,0	1/1:0,22:21:60.20:839,60,0	1/1:0,28:27:81.27:1131,81,0	1/1:0,30:30:84.28:1175,84,0	1/1:0,33:33:99:1382,99,0	1/1:0,23:23:66.22:923,66,0	0/0:26,0:26:78.27:0,78,1247	0/0:30,0:30:90.29:0,90,1405	1/1:0,27:27:75.25:1049,75,0	1/1:0,47:47:99:1761,126,0	0/0:26,0:26:75.26:0,75,1199	0/0:27,0:27:81.28:0,81,1295	0/0:16,0:15:45.15:0,45,719	0/0:20,0:20:60.19:0,60,915	0/0:30,0:30:87.28:0,87,1367	0/0:27,0:27:78.24:0,78,1247	0/0:24,0:24:72.24:0,72,1140	0/0:20,0:20:60.19:0,60,933	0/0:31,0:31:93.32:0,93,1487	1/1:0,23:23:66.22:923,66,0	1/1:0,44:44:99:1841,132,0	0/0:28,0:28:81.27:0,81,1270	1/1:0,13:13:39.13:545,39,0
chr10	54454735	.	C	CAAAGCCAT	56860.42	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=-8.454;DP=727;FS=13.930;HRun=0;HaplotypeScore=161.5465;InbreedingCoeff=0.9933;MQ=68.20;MQ0=0;MQRankSum=-17.846;QD=105.30;ReadPosRankSum=-1.648;VQSLOD=4.8324;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,21:40:75.21:3018,75,0	1/1:1,7:8:24.08:1038,24,0	0/0:20,0:20:56.58:0,57,1357	0/0:17,0:17:35.37:0,35,857	1/1:8,22:32:78.09:2759,78,0	1/1:7,17:25:72.25:3103,72,0	1/1:8,12:20:57.20:2507,57,0	1/1:13,12:28:81.28:3140,81,0	1/1:3,24:30:78.27:3415,78,0	1/1:14,18:38:99:3837,105,0	1/1:4,17:22:60.12:2452,60,0	0/0:27,0:27:78.23:0,78,2160	0/0:33,0:33:93.30:0,93,2624	1/1:6,15:23:63.22:2751,63,0	1/1:15,10:31:72.25:2635,72,0	1/1:10,24:35:93.32:3941,93,0	1/1:10,13:26:66.23:2812,66,0	1/1:3,6:10:24.08:1085,24,0	1/1:4,12:20:57.16:2069,57,0	1/1:4,20:25:69.24:3061,69,0	1/1:6,3:15:12.04:541,12,0	0/0:35,0:35:99:0,99,2754	0/0:30,0:30:90.31:0,90,2573	0/0:25,0:25:72.25:0,72,2027	1/1:10,15:26:72.06:2567,72,0	1/1:10,30:46:99:5223,132,0	1/1:7,23:32:87.30:3860,87,0	1/1:1,7:8:24.08:1046,24,0
chr10	54455176	.	G	GAGGCTTAC	39109.54	PASS	AB=1.000;AC=43;AF=0.768;AN=56;BaseQRankSum=-7.419;DP=548;FS=2.648;HRun=0;HaplotypeScore=123.1707;InbreedingCoeff=0.8601;MQ=85.83;MQ0=0;MQRankSum=-16.000;QD=91.81;ReadPosRankSum=-0.915;VQSLOD=5.1729;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,20:34:69.24:2959,69,0	1/1:2,3:5:15.05:560,15,0	0/0:27,0:28:38.33:0,38,2010	0/0:24,0:24:66.06:0,66,1651	1/1:9,13:25:51.18:1894,51,0	1/1:4,13:19:48.16:1958,48,0	1/1:5,10:17:42.14:1831,42,0	1/1:11,11:27:81.22:2815,81,0	1/1:3,13:16:39.13:1737,39,0	1/1:7,12:20:54.19:2108,54,0	1/1:9,12:24:51.18:2011,51,0	0/0:15,0:15:45.14:0,45,1193	0/1:25,0:25:64.42:64,0,1785	1/1:7,18:27:69.24:2873,69,0	1/1:10,23:34:90.31:3573,90,0	1/1:6,13:20:54.19:2150,54,0	1/1:1,6:9:18.06:628,18,0	1/1:2,5:12:17.27:676,17,0	1/1:10,11:23:60.21:2356,60,0	1/1:8,11:19:54.18:1953,54,0	1/1:3,3:6:15.05:391,15,0	0/0:16,0:16:42.14:0,42,1092	0/0:19,0:19:57.20:0,57,1596	0/0:20,0:20:60.21:0,60,1700	1/1:3,12:19:42.14:1712,42,0	1/1:9,16:27:81.27:2969,81,0	1/1:6,10:16:45.15:1759,45,0	1/1:0,0:1:3.01:131,3,0
chr10	54455383	.	G	GTGATGATGA	17753.77	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-1.714;DP=684;FS=2.489;HRun=0;HaplotypeScore=190.0980;InbreedingCoeff=0.9427;MQ=66.95;MQ0=3;MQRankSum=-13.543;QD=43.09;ReadPosRankSum=-3.137;VQSLOD=4.0098;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:20:14.64:480,15,0	1/1:9,4:13:15.05:680,15,0	0/0:31,0:27:23.87:0,24,421	0/0:33,0:32:26.58:0,27,547	1/1:16,8:25:24.08:1086,24,0	1/1:26,2:35:24.08:935,24,0	1/1:7,0:13:6.02:115,6,0	1/1:57,0:57:72.22:2192,72,0	1/1:9,5:16:21.07:951,21,0	1/1:17,6:23:30.09:1140,30,0	1/1:12,9:25:24.08:1008,24,0	0/0:19,0:19:33.11:0,33,884	0/0:33,0:33:66.23:0,66,1760	1/1:14,1:26:27.09:1069,27,0	1/1:17,14:33:45.15:2036,45,0	1/1:17,13:33:46.89:2091,47,0	1/1:10,0:15:15.05:580,15,0	1/1:8,0:10:9.03:344,9,0	0/0:19,0:19:33.11:0,33,902	0/0:31,0:31:54.18:0,54,1452	0/0:18,0:18:36.12:0,36,968	0/0:28,0:29:66.20:0,66,1620	0/0:15,0:15:33.07:0,33,734	0/0:17,0:17:30.06:0,30,728	1/1:20,7:28:24.08:1088,24,0	1/1:21,12:34:42.14:1822,42,0	0/0:27,0:27:63.22:0,63,1729	1/1:5,1:6:3.01:136,3,0
chr10	54457161	.	T	TA	8436.93	PASS	AB=1.000;AC=43;AF=0.768;AN=56;BaseQRankSum=-3.084;DP=353;FS=4.777;HRun=5;HaplotypeScore=49.8707;InbreedingCoeff=0.8551;MQ=56.07;MQ0=2;MQRankSum=-4.492;QD=30.46;ReadPosRankSum=-0.691;VQSLOD=4.9720;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,12:12:24.08:316,24,0	1/1:0,5:5:11.99:158,12,0	0/0:4,0:3:6.02:0,6,65	0/1:6,0:7:14.40:14,0,83	1/1:1,14:15:39.13:505,39,0	1/1:3,11:13:39.08:489,39,0	1/1:1,5:6:15.01:177,15,0	1/1:3,17:19:51.16:654,51,0	1/1:1,8:9:27.09:347,27,0	1/1:2,10:11:33.11:431,33,0	1/1:3,12:15:39.13:503,39,0	0/0:16,0:16:42.09:0,42,443	0/0:14,0:14:33.08:0,33,354	1/1:4,4:8:15.05:193,15,0	1/1:5,13:18:45.14:579,45,0	1/1:0,10:10:27.09:355,27,0	1/1:3,15:18:30.06:374,30,0	1/1:0,15:15:27.09:355,27,0	1/1:5,1:6:11.99:124,12,0	1/1:3,15:17:42.14:552,42,0	1/1:0,13:13:36.12:474,36,0	0/0:11,0:9:21.05:0,21,225	0/0:18,1:18:11.71:0,12,475	0/0:12,0:12:36.09:0,36,385	1/1:1,17:18:51.16:665,51,0	1/1:1,7:8:21.07:272,21,0	1/1:1,19:20:48.15:622,48,0	1/1:1,7:8:21.07:276,21,0
chr10	54457190	.	CA	C	3730.14	PASS	AB=0.760;AC=34;AF=0.607;AN=56;BaseQRankSum=-2.362;DP=432;FS=24.174;HRun=13;HaplotypeScore=79.6269;InbreedingCoeff=0.6679;MQ=66.71;MQ0=1;MQRankSum=-5.136;QD=12.43;ReadPosRankSum=2.723;VQSLOD=1.7640;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:34.34:0,34,394	0/0:7,0:8:17.86:0,18,160	0/0:14,0:10:14.88:0,15,121	0/0:13,0:7:2.67:0,3,9	1/1:4,17:22:54.76:383,55,0	1/1:2,12:15:42.85:296,43,0	1/1:1,6:7:14.91:109,15,0	1/1:10,12:27:19.66:261,20,0	1/1:3,8:11:29.80:218,30,0	1/1:5,9:14:20.82:153,21,0	1/1:4,13:17:32.74:241,33,0	1/1:5,12:17:35.78:263,36,0	1/1:3,13:18:36.86:252,37,0	1/1:2,8:10:17.86:131,18,0	1/1:8,9:17:5.39:195,5,0	0/1:10,2:15:15.68:16,0,232	0/0:15,0:15:31.57:0,32,287	0/0:14,0:15:26.84:0,27,234	0/0:14,0:14:23.87:0,24,218	0/0:14,1:16:13.94:0,14,260	0/0:14,0:14:21.02:0,21,199	1/1:1,13:14:23.82:175,24,0	1/1:3,15:20:22.65:311,23,0	1/1:1,10:12:31.87:225,32,0	1/1:3,13:18:42.81:295,43,0	0/1:5,9:15:20.57:184,0,21	0/1:23,3:27:5.80:6,0,413	0/1:2,1:3:15.12:16,0,15
chr10	54458075	.	TTCTCTCTCTC	T	196.88	PASS	AB=1.000;AC=5;AF=0.109;AN=46;BaseQRankSum=2.967;DP=452;FS=7.193;HRun=0;HaplotypeScore=122.0848;InbreedingCoeff=0.4360;MQ=55.04;MQ0=40;MQRankSum=0.358;QD=4.80;ReadPosRankSum=-0.569;VQSLOD=1.4740;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	1/1:5,0:7:3.01:85,3,0	./.	./.	0/0:14,0:12:12.04:0,12,443	0/0:18,0:17:27.06:0,27,506	0/0:15,0:10:9.03:0,9,228	0/0:26,0:25:18.30:0,18,322	0/0:19,0:17:24.55:0,25,578	0/0:16,0:16:21.06:0,21,532	0/1:11,0:11:41.11:41,0,156	0/0:13,0:13:9.03:0,9,365	0/0:13,0:13:21.07:0,21,763	0/0:11,0:8:3.01:0,3,75	0/0:17,0:17:27.09:0,27,642	./.	1/1:10,12:19:6.02:175,6,0	./.	0/0:20,0:19:29.46:0,29,979	0/0:18,0:18:15.05:0,15,609	0/0:22,0:18:5.99:0,6,131	0/0:10,0:9:18.04:0,18,535	0/0:9,0:9:12.04:0,12,445	0/0:24,0:19:16.19:0,16,1124	0/0:11,0:9:14.90:0,15,216	0/0:10,0:18:4.21:0,4,445	0/0:15,0:15:30.10:0,30,1071	0/0:17,0:15:15.05:0,15,280
chr10	54458115	.	CTGTGTGTGTGTGTG	C	273.42	PASS	AB=0.990;AC=11;AF=0.275;AN=40;BaseQRankSum=0.933;DP=609;FS=0.000;HRun=0;HaplotypeScore=137.2043;InbreedingCoeff=0.2387;MQ=32.88;MQ0=212;MQRankSum=0.037;QD=2.04;ReadPosRankSum=1.007;VQSLOD=2.6126;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	1/1:9,0:8:3.01:43,3,0	./.	./.	./.	0/0:22,4:21:0:0,0,1	0/0:22,0:7:2.69:0,3,7	0/0:21,0:17:1.55:0,2,4	1/1:20,1:14:3.27:105,3,0	1/1:15,0:11:2.68:83,3,0	0/1:13,0:11:0:0,0,0	0/0:21,0:11:6.91:0,7,166	./.	0/0:22,0:14:0:0,0,0	0/0:18,0:17:0:0,0,0	1/1:14,0:9:5.44:28,5,0	0/1:31,1:19:99:107,0,105	0/0:31,0:11:0:0,0,0	./.	0/0:16,0:11:0.47:0,0,1	./.	0/0:18,0:10:3.01:0,3,67	0/0:17,0:14:3.01:0,3,103	0/0:52,0:28:3.01:0,3,49	./.	0/0:30,0:25:5.25:0,5,23	0/0:26,0:21:0.34:0,0,0	0/1:28,0:9:9.98:10,0,182
chr10	54458368	.	TA	T	10131.76	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=6.957;DP=598;FS=10.761;HRun=10;HaplotypeScore=59.3941;InbreedingCoeff=0.9856;MQ=73.97;MQ0=0;MQRankSum=-2.448;QD=21.38;ReadPosRankSum=2.945;VQSLOD=5.4033;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,30:33:80.98:703,81,0	1/1:2,4:6:12:104,12,0	0/0:15,0:15:27.07:0,27,289	0/0:12,0:10:11.99:0,12,124	1/1:5,20:25:59.98:521,60,0	1/1:2,15:17:38.99:339,39,0	1/1:2,21:23:47.99:417,48,0	1/1:7,39:47:99:1021,119,0	1/1:0,20:20:53.99:468,54,0	1/1:5,21:26:62.94:538,63,0	1/1:3,20:23:50.92:436,51,0	0/0:17,0:17:42.11:0,42,465	0/0:19,1:20:28.07:0,28,524	1/1:3,26:29:63.04:613,63,0	1/1:7,18:25:50.98:443,51,0	1/1:1,17:18:47.99:417,48,0	1/1:3,29:32:80.98:703,81,0	1/1:0,16:16:41.99:365,42,0	1/1:3,21:24:62.97:543,63,0	1/1:4,23:27:62.31:523,62,0	1/1:0,15:15:44.99:391,45,0	0/0:17,1:18:19.02:0,19,418	0/0:16,0:16:42.09:0,42,453	0/0:26,0:26:63.14:0,63,679	1/1:2,19:21:50.99:443,51,0	1/1:1,17:18:50.99:443,51,0	1/1:0,22:22:62.99:547,63,0	1/1:0,7:7:18:156,18,0
chr10	54458810	.	G	GAA	13494.53	PASS	AB=0.545;AC=41;AF=0.732;AN=56;BaseQRankSum=6.204;DP=587;FS=3.101;HRun=10;HaplotypeScore=104.5436;InbreedingCoeff=0.8921;MQ=72.71;MQ0=0;MQRankSum=-3.243;QD=28.47;ReadPosRankSum=1.439;VQSLOD=5.0375;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,18:21:46.25:636,46,0	1/1:3,6:9:21.07:312,21,0	0/0:16,0:16:38.54:0,39,346	0/0:7,0:7:14.51:0,15,131	1/1:5,20:29:62.99:785,63,0	1/1:7,17:25:42.14:609,42,0	1/1:3,16:20:39.13:583,39,0	1/1:8,19:32:59.06:896,59,0	1/1:6,15:23:43.61:563,44,0	1/1:7,23:35:85.19:1099,85,0	1/1:9,20:32:58.45:777,58,0	0/0:17,0:18:44.81:0,45,439	0/0:20,0:20:36.06:0,36,366	1/1:2,8:11:26.58:367,27,0	1/1:4,17:22:44.64:635,45,0	1/1:4,12:19:13.59:497,14,0	0/1:3,13:18:25.17:376,0,25	1/1:3,16:21:11.11:515,11,0	1/1:9,13:22:42.14:611,42,0	1/1:3,22:27:40.55:822,41,0	1/1:0,13:14:36.12:536,36,0	0/0:18,0:18:45.09:0,45,458	0/0:27,0:28:77.89:0,78,773	0/0:6,0:6:15.03:0,15,152	1/1:1,16:17:45.15:670,45,0	1/1:7,17:28:61.63:790,62,0	1/1:4,28:35:76.60:1055,77,0	1/1:2,9:14:29.07:359,29,0
chr10	54458921	.	T	TA	3036.22	PASS	AB=0.758;AC=28;AF=0.500;AN=56;BaseQRankSum=-4.062;DP=577;FS=0.464;HRun=14;HaplotypeScore=99.0987;InbreedingCoeff=0.4219;MQ=75.50;MQ0=2;MQRankSum=-0.906;QD=7.23;ReadPosRankSum=-2.235;VQSLOD=2.3368;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:19:12.66:0,13,48	0/0:1,0:7:12.20:0,12,35	0/1:14,0:11:3.17:3,0,17	0/1:18,1:17:15.99:16,0,21	1/1:10,18:28:13.36:340,13,0	1/1:10,16:26:7.73:192,8,0	0/1:5,14:20:8.51:174,0,9	0/1:17,13:30:4.35:194,0,4	1/1:11,8:19:27.83:229,28,0	0/1:16,11:28:8.71:156,0,9	0/1:9,18:28:1.93:201,0,2	0/0:11,0:12:10.63:0,11,63	0/0:19,0:21:21.49:0,21,126	1/1:5,11:16:11.99:103,12,0	1/1:12,15:28:19.57:285,20,0	0/0:4,0:12:14.24:0,14,41	0/0:4,0:24:29.73:0,30,86	0/0:3,0:6:9.02:0,9,37	1/1:14,6:20:7.72:177,8,0	1/1:15,11:26:23.99:209,24,0	0/1:9,2:10:38.47:38,0,42	0/0:20,0:20:20.41:0,20,134	0/0:19,0:19:3.27:0,3,130	0/0:16,0:17:28.39:0,28,172	1/1:5,13:19:23.84:199,24,0	1/1:22,10:32:4.57:153,5,0	1/1:17,12:29:16.25:361,16,0	0/1:18,7:25:19.69:200,0,20
chr10	54459641	.	TATATATGCATATATATGC	T	2949.24	PASS	AB=1.000;AC=23;AF=0.426;AN=54;BaseQRankSum=5.303;DP=411;FS=3.973;HRun=0;HaplotypeScore=176.9169;InbreedingCoeff=0.3347;MQ=74.13;MQ0=6;MQRankSum=-2.680;QD=16.29;ReadPosRankSum=-1.875;VQSLOD=2.4580;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:20,3:23:15.05:590,15,0	1/1:11,0:11:6.02:183,6,0	0/0:32,0:8:2.79:0,3,50	0/0:48,0:17:0.75:0,1,72	0/0:9,0:9:4.73:0,5,27	1/1:11,0:11:3.96:69,4,0	0/1:9,0:9:1.46:48,0,1	0/1:29,0:28:14.89:360,0,15	0/0:10,0:10:6.12:0,6,51	0/1:12,0:12:19.15:91,0,19	0/0:6,0:6:6.12:0,6,53	0/0:31,0:31:84.27:0,84,5543	0/0:18,0:18:54.19:0,54,3599	0/1:13,0:13:7.01:45,0,7	1/1:5,0:5:2.96:19,3,0	1/1:17,2:18:24.08:820,24,0	1/1:5,1:6:6.02:165,6,0	1/1:13,2:15:12.04:547,12,0	0/0:2,0:2:3.01:0,3,69	0/1:2,0:2:0:0,0,0	./.	0/0:25,0:25:63.21:0,63,4239	0/0:26,0:26:69.24:0,69,4124	0/0:15,0:15:45.11:0,45,2733	1/1:5,0:5:0.47:1,0,0	0/1:12,0:12:63.55:72,0,64	0/0:6,0:6:0.89:0,1,2	0/1:9,0:9:2.45:99,0,2
chr10	54459643	.	TATATGCATATATATGC	T	4730.47	PASS	AB=1.000;AC=37;AF=0.661;AN=56;BaseQRankSum=10.126;DP=410;FS=2.390;HRun=0;HaplotypeScore=160.3374;InbreedingCoeff=0.6244;MQ=74.07;MQ0=6;MQRankSum=-6.659;QD=22.74;ReadPosRankSum=-1.558;VQSLOD=3.5321;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:9,13:22:15.05:516,15,0	1/1:1,9:10:6.02:279,6,0	0/0:34,0:8:2.71:0,3,75	0/0:48,0:18:1.32:0,1,97	1/1:9,0:9:10.25:111,10,0	1/1:12,0:12:9.01:148,9,0	1/1:9,0:9:8.94:124,9,0	1/1:32,0:31:46.91:730,47,0	0/1:9,0:9:8.42:36,0,8	1/1:12,0:12:25.14:227,25,0	1/1:6,0:6:8.17:85,8,0	0/0:30,0:30:84.27:0,84,4979	0/0:21,0:21:63.21:0,63,3509	1/1:12,0:12:14.95:169,15,0	1/1:6,0:6:3.01:45,3,0	1/1:5,13:17:24.08:1036,24,0	1/1:4,0:4:6.02:129,6,0	1/1:6,9:15:12.04:498,12,0	0/0:2,0:2:2.43:0,2,33	0/1:2,0:2:0:0,0,0	0/1:1,0:1:0:0,0,0	0/0:25,0:25:69.24:0,69,4050	0/0:26,0:26:69.24:0,69,3649	0/0:15,0:15:45.11:0,45,2448	1/1:4,0:4:3:28,3,0	1/1:11,0:11:7.52:210,8,0	1/1:4,0:4:3.01:42,3,0	1/1:9,1:10:20.98:316,21,0
chr10	54459645	.	TATGCATATATATGC	T	6135.20	PASS	AB=1.000;AC=40;AF=0.714;AN=56;BaseQRankSum=10.752;DP=410;FS=2.962;HRun=0;HaplotypeScore=145.2144;InbreedingCoeff=0.6519;MQ=74.84;MQ0=7;MQRankSum=-7.121;QD=23.87;ReadPosRankSum=-1.614;VQSLOD=4.0024;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:20:15.05:425,15,0	1/1:10,0:10:6.02:208,6,0	0/0:35,0:9:6.01:0,6,70	0/1:51,0:18:0.90:1,0,78	1/1:10,1:11:18.06:267,18,0	1/1:11,1:12:9.03:252,9,0	1/1:8,1:9:8.99:228,9,0	1/1:28,1:28:75.22:1146,75,0	1/1:8,0:8:8.52:111,9,0	1/1:7,6:13:33.09:480,33,0	1/1:6,0:6:12.04:181,12,0	0/0:29,0:29:83.94:0,84,4486	0/0:22,0:22:66.23:0,66,3245	1/1:7,5:12:15.05:322,15,0	1/1:6,0:6:3.01:71,3,0	1/1:16,0:16:24.08:794,24,0	1/1:6,0:6:8.82:128,9,0	1/1:12,0:13:12.04:428,12,0	0/1:2,0:2:15.53:34,0,16	0/1:2,0:2:0:0,0,0	0/1:1,0:1:0:0,0,0	0/0:25,0:25:69.24:0,69,3731	0/0:26,0:26:69.23:0,69,3241	0/0:16,0:16:48.12:0,48,2309	1/1:4,0:4:3.01:51,3,0	1/1:11,0:11:29.89:461,30,0	1/1:3,0:3:3.01:46,3,0	1/1:11,0:11:27.09:502,27,0
chr10	54459647	.	TGC	T	2683.09	PASS	AB=0.720;AC=37;AF=0.661;AN=56;BaseQRankSum=10.646;DP=406;FS=6.582;HRun=0;HaplotypeScore=95.0408;InbreedingCoeff=0.4423;MQ=74.97;MQ0=7;MQRankSum=-6.497;QD=11.32;ReadPosRankSum=-0.236;VQSLOD=2.9451;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:18,0:18:22.52:23,0,24	1/1:10,0:10:5.91:38,6,0	1/1:36,0:9:2.41:12,2,0	0/0:51,0:18:0.87:0,1,28	1/1:8,4:12:21.06:290,21,0	1/1:1,3:13:8.95:82,9,0	1/1:1,3:10:8.94:98,9,0	1/1:1,8:28:57.15:628,57,0	0/1:3,5:8:4.75:108,0,5	1/1:6,6:12:18.79:216,19,0	1/1:3,2:5:12.04:178,12,0	0/0:30,0:30:87.28:0,87,1640	0/0:22,0:22:63.22:0,63,1207	1/1:5,6:11:15:176,15,0	1/1:0,0:5:2.99:24,3,0	1/1:18,0:17:23.63:177,24,0	0/1:6,1:7:32.42:35,0,32	1/1:13,0:13:11.75:71,12,0	1/1:1,1:2:3.48:40,3,0	0/0:0,1:1:0:0,0,0	0/1:0,1:1:0:0,0,0	0/0:23,0:23:68.04:0,68,1274	0/0:26,0:26:75.25:0,75,1442	0/0:16,0:16:48.12:0,48,896	1/1:1,2:3:3:28,3,0	1/1:0,6:10:28.60:331,29,0	1/1:1,2:3:3.01:44,3,0	0/1:4,6:11:16.56:259,0,17
chr10	54459651	.	TATATATGC	T	4217.89	PASS	AB=0.850;AC=35;AF=0.648;AN=54;BaseQRankSum=10.382;DP=415;FS=0.524;HRun=0;HaplotypeScore=122.2128;InbreedingCoeff=0.5568;MQ=75.50;MQ0=7;MQRankSum=-9.006;QD=20.48;ReadPosRankSum=0.425;VQSLOD=4.3182;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:18:14.99:198,15,0	1/1:10,0:10:6.02:115,6,0	0/0:37,0:9:4.13:0,4,37	0/0:52,0:19:3.99:0,4,77	1/1:11,2:13:21.06:320,21,0	1/1:12,1:13:9.03:192,9,0	1/1:7,3:10:8.99:203,9,0	1/1:28,1:28:34.49:453,34,0	0/1:6,2:8:2.04:209,0,2	1/1:9,3:12:5.49:331,5,0	1/1:6,1:7:9.03:164,9,0	0/0:28,0:28:69.20:0,69,2724	0/0:23,0:23:63.20:0,63,2155	1/1:8,3:11:15.05:349,15,0	1/1:5,0:5:3.01:61,3,0	1/1:18,0:17:24.07:423,24,0	0/1:9,0:9:11.90:30,0,12	1/1:13,0:13:12.04:229,12,0	0/0:2,0:2:1.14:0,1,2	1/1:2,0:2:1.51:4,2,0	./.	0/0:23,0:23:63.22:0,63,2393	0/0:27,0:27:66.23:0,66,2195	0/0:16,0:16:42.14:0,42,1489	1/1:3,0:3:1.55:4,2,0	1/1:9,1:10:22.63:422,23,0	1/1:3,0:3:3.01:44,3,0	0/1:8,4:12:10.69:468,0,11
chr10	54459655	.	TATGC	T	3461.23	PASS	AB=1.000;AC=41;AF=0.732;AN=56;BaseQRankSum=11.002;DP=409;FS=0.510;HRun=0;HaplotypeScore=103.4280;InbreedingCoeff=0.5604;MQ=75.69;MQ0=8;MQRankSum=-7.693;QD=13.31;ReadPosRankSum=-0.782;VQSLOD=3.0921;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:18:14.93:141,15,0	1/1:9,1:10:6.01:63,6,0	0/0:38,0:10:1.55:0,2,4	0/1:51,0:18:9.34:9,0,22	1/1:14,0:14:24.07:344,24,0	1/1:13,0:13:9.03:121,9,0	1/1:10,0:10:8.99:136,9,0	1/1:29,0:28:50.07:539,50,0	1/1:4,4:8:12.04:215,12,0	0/1:12,0:12:9.04:341,0,9	1/1:7,0:7:9.03:144,9,0	0/0:26,0:26:72.21:0,72,1808	0/0:21,0:21:63.20:0,63,1562	1/1:11,0:11:15.05:239,15,0	1/1:5,0:5:3.01:37,3,0	1/1:17,1:17:19.81:217,20,0	1/1:7,0:7:6.46:53,6,0	1/1:13,0:13:12.03:127,12,0	1/1:2,0:2:3.48:35,3,0	1/1:2,0:2:1.51:4,2,0	0/1:1,0:1:0:0,0,0	0/0:21,0:21:63.22:0,63,1593	0/0:27,0:27:69.21:0,69,1588	0/0:16,0:16:45.15:0,45,1130	1/1:3,0:3:1.55:4,2,0	1/1:10,0:10:22.62:310,23,0	1/1:3,0:3:3.01:44,3,0	1/1:12,0:12:2.84:339,3,0
chr10	54459657	.	TGC	T	2887.95	PASS	AB=0.767;AC=39;AF=0.722;AN=54;BaseQRankSum=10.918;DP=405;FS=1.063;HRun=0;HaplotypeScore=93.7312;InbreedingCoeff=0.5822;MQ=75.91;MQ0=9;MQRankSum=-7.311;QD=11.41;ReadPosRankSum=-0.416;VQSLOD=3.3362;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:18:11.53:93,12,0	1/1:10,0:10:5.91:38,6,0	0/0:39,0:10:3.27:0,3,12	0/1:51,0:17:14.70:15,0,39	1/1:10,2:12:24.07:333,24,0	1/1:11,2:13:8.95:83,9,0	1/1:10,0:10:8.94:98,9,0	1/1:22,7:28:50.07:542,50,0	1/1:6,2:8:12.02:143,12,0	0/1:9,3:12:10.99:326,0,11	1/1:5,2:7:12.04:177,12,0	0/0:28,0:28:81.24:0,81,1510	0/0:21,0:21:63.20:0,63,1184	1/1:8,3:11:15:176,15,0	1/1:5,0:5:2.99:24,3,0	1/1:17,1:17:9.65:139,10,0	1/1:2,5:7:7.27:97,7,0	1/1:13,0:13:11.81:81,12,0	1/1:0,1:1:3.01:44,3,0	1/1:2,0:2:2.96:25,3,0	0/1:0,1:1:0:0,0,0	0/0:21,0:21:63.22:0,63,1218	0/0:26,0:26:68.34:0,68,1301	0/0:15,0:15:45.15:0,45,868	./.	1/1:7,3:10:23.06:251,23,0	1/1:1,2:3:3.01:44,3,0	1/1:10,2:12:27.49:334,27,0
chr10	54462696	.	G	GT	6082.27	PASS	AB=0.869;AC=35;AF=0.625;AN=56;BaseQRankSum=2.184;DP=413;FS=3.439;HRun=10;HaplotypeScore=72.2010;InbreedingCoeff=0.7677;MQ=68.88;MQ0=0;MQRankSum=-9.694;QD=21.12;ReadPosRankSum=-0.856;VQSLOD=5.5467;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,8:12:25.31:258,25,0	1/1:1,5:6:15.04:160,15,0	0/0:8,0:7:6.53:0,7,27	0/0:17,0:16:27.04:0,27,225	1/1:4,13:17:45.06:460,45,0	1/1:3,12:15:36.09:384,36,0	1/1:3,11:14:14.45:359,14,0	1/1:14,23:38:56.38:782,56,0	1/1:2,6:8:18.05:191,18,0	1/1:7,16:23:51.12:538,51,0	1/1:2,12:14:39.02:389,39,0	0/0:10,0:10:26.96:0,27,219	0/1:12,1:13:2.02:2,0,191	1/1:2,19:21:54.14:574,54,0	1/1:2,7:9:21.05:224,21,0	1/1:0,3:3:9.02:96,9,0	1/1:5,6:11:23.01:209,23,0	1/1:5,10:17:16.64:330,17,0	0/0:24,1:25:24.94:0,25,411	0/0:20,1:21:15.93:0,16,337	0/0:7,0:7:17.98:0,18,148	0/1:10,1:11:5.03:5,0,170	0/0:9,0:10:23.01:0,23,178	0/0:7,0:8:5.30:0,5,111	1/1:2,18:20:51.13:543,51,0	1/1:8,12:19:20.50:423,21,0	0/0:19,0:19:50.94:0,51,418	0/1:11,5:16:24.34:156,0,24
chr10	54462713	.	A	AT	8541.83	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=-0.534;DP=389;FS=3.003;HRun=8;HaplotypeScore=60.2894;InbreedingCoeff=0.8740;MQ=67.98;MQ0=0;MQRankSum=-6.539;QD=26.53;ReadPosRankSum=0.437;VQSLOD=5.6245;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,11:15:20.98:213,21,0	1/1:2,4:6:15.04:165,15,0	0/0:9,0:9:2.54:0,3,106	0/0:18,0:16:29.56:0,30,245	1/1:2,18:20:48.10:539,48,0	1/1:1,14:15:42.12:484,42,0	1/1:4,13:17:2.83:376,3,0	1/1:12,30:42:96.25:1082,96,0	1/1:3,3:6:6.02:69,6,0	1/1:5,15:20:48.14:552,48,0	1/1:3,8:12:26.91:291,27,0	0/0:8,0:8:18.01:0,18,165	0/0:8,0:8:15.01:0,15,137	1/1:6,13:19:45.04:480,45,0	1/1:0,3:3:9.03:104,9,0	1/1:1,2:3:6.02:69,6,0	1/1:2,10:12:24.04:263,24,0	1/1:8,12:21:42.50:461,42,0	1/1:0,20:20:60.18:691,60,0	1/1:2,18:20:54.12:608,54,0	1/1:0,7:7:21.06:242,21,0	0/0:10,0:10:21.01:0,21,192	0/0:7,0:7:17.96:0,18,157	0/0:7,0:7:18.01:0,18,165	1/1:3,16:19:51.15:587,51,0	1/1:6,11:17:36.06:398,36,0	1/1:1,15:16:45.13:519,45,0	1/1:0,12:12:30.09:348,30,0
chr10	54462830	.	GTATTTATTTATTTATTTATT	G	6791.06	PASS	AB=0.833;AC=34;AF=0.654;AN=52;BaseQRankSum=4.304;DP=280;FS=6.375;HRun=0;HaplotypeScore=146.8767;InbreedingCoeff=0.3046;MQ=60.37;MQ0=1;MQRankSum=-4.227;QD=29.66;ReadPosRankSum=1.209;VQSLOD=3.4597;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:7,2:9:6.02:223,6,0	1/1:4,3:7:3.01:160,3,0	./.	0/0:5,0:4:3.01:0,3,161	1/1:16,10:26:27.01:801,27,0	1/1:8,6:14:15.05:789,15,0	0/1:3,3:6:78.92:154,0,79	0/1:26,0:26:44.77:45,0,176	1/1:7,2:9:3.01:160,3,0	1/1:6,6:12:16.71:959,17,0	1/1:10,4:14:6.95:254,7,0	0/0:8,0:8:6.01:0,6,307	0/0:4,0:4:12.04:0,12,974	1/1:7,1:8:3.01:160,3,0	1/1:1,4:5:9.03:481,9,0	1/1:4,1:5:5.98:180,6,0	1/1:6,3:9:3.01:160,3,0	0/0:10,0:10:3.01:0,3,107	0/1:13,0:17:44.32:44,0,157	1/1:6,0:7:2.97:20,3,0	0/0:1,0:4:2.97:0,3,20	./.	0/0:7,0:7:3.01:0,3,280	0/0:5,0:5:6.01:0,6,305	1/1:8,8:16:15.05:801,15,0	1/1:10,9:18:24.08:1123,24,0	0/1:10,0:12:31.79:107,0,32	1/1:8,0:8:9.03:171,9,0
chr10	54467383	.	AG	A	30.89	PASS	AC=10;AF=0.263;AN=38;BaseQRankSum=1.461;DP=48;FS=0.000;HRun=3;HaplotypeScore=12.5960;InbreedingCoeff=0.3551;MQ=76.01;MQ0=0;MQRankSum=-2.265;QD=4.41;ReadPosRankSum=0.073;VQSLOD=0.0385;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,2:3:5.93:40,6,0	1/1:0,1:1:3.01:35,3,0	0/0:4,0:2:0.68:0,1,35	0/0:5,0:4:5.42:0,5,23	./.	0/0:4,0:4:4.88:0,5,42	0/0:2,0:2:1.92:0,2,24	0/0:7,0:7:18.41:0,18,147	1/1:0,1:1:2.98:22,3,0	0/0:4,0:4:8.97:0,9,76	./.	0/0:2,0:2:5.69:0,6,30	./.	./.	0/0:1,0:1:2.98:0,3,22	1/1:1,0:1:3:27,3,0	./.	1/1:0,1:1:2.97:20,3,0	0/0:1,0:1:3.01:0,3,39	./.	0/0:3,0:3:3.46:0,3,25	0/0:1,0:1:3.01:0,3,42	0/0:1,0:1:2.92:0,3,17	./.	./.	0/0:3,0:3:5.93:0,6,40	0/0:1,0:1:2.98:0,3,21	./.
chr10	54467802	.	G	GA	11969.94	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=-16.124;DP=651;FS=0.000;HRun=8;HaplotypeScore=54.8812;InbreedingCoeff=0.9870;MQ=78.55;MQ0=0;MQRankSum=-1.314;QD=29.63;ReadPosRankSum=0.667;VQSLOD=4.6660;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:48.02:0,48,439	0/0:10,0:10:24.01:0,24,220	0/0:18,0:18:20.45:0,20,264	0/0:15,0:14:7.13:0,7,249	1/1:2,34:36:99:1114,99,0	1/1:1,13:14:36.11:415,36,0	1/1:0,19:19:51.15:589,51,0	1/1:4,26:31:81.06:905,81,0	1/1:1,33:34:90.27:1039,90,0	1/1:8,22:30:72.19:812,72,0	1/1:3,20:23:35.68:650,36,0	0/0:27,0:27:72.04:0,72,659	0/0:22,0:22:63.03:0,63,577	1/1:3,18:21:54.16:618,54,0	1/1:2,15:17:42.12:485,42,0	0/0:22,0:22:63.03:0,63,577	0/0:25,0:25:62.99:0,63,569	0/0:21,0:21:57.02:0,57,521	1/1:1,13:14:39.09:431,39,0	1/1:3,14:17:39.12:450,39,0	1/1:1,24:25:72.21:831,72,0	0/0:25,0:25:75.02:0,75,680	0/0:29,0:29:84.02:0,84,761	0/0:14,0:14:35.95:0,36,315	1/1:6,38:44:99:1212,105,0	1/1:2,34:36:99:1154,102,0	1/1:6,28:34:84.22:954,84,0	1/1:0,9:9:27.08:312,27,0
chr10	54470166	.	G	GA	11335.84	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=-12.385;DP=581;FS=1.255;HRun=8;HaplotypeScore=55.0400;InbreedingCoeff=0.9565;MQ=65.56;MQ0=5;MQRankSum=-1.013;QD=26.30;ReadPosRankSum=-1.249;VQSLOD=5.0889;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,45:47:99:1383,120,0	1/1:2,0:2:2.98:22,3,0	0/0:9,0:5:15.01:0,15,135	0/0:17,0:15:21.56:0,22,186	1/1:7,28:35:78.13:865,78,0	1/1:3,20:23:57.17:658,57,0	1/1:4,19:23:51.07:571,51,0	1/1:7,26:33:78:868,78,0	1/1:3,11:13:27.08:312,27,0	1/1:4,14:18:45.12:508,45,0	1/1:3,15:18:45.13:515,45,0	0/0:21,0:21:57:0,57,514	0/0:13,0:13:30.01:0,30,275	1/1:2,21:23:54.16:623,54,0	1/1:3,7:10:18.05:208,18,0	1/1:2,19:21:48.14:554,48,0	1/1:8,23:29:63.19:727,63,0	1/1:5,20:23:35.65:662,36,0	1/1:2,12:14:36.11:415,36,0	1/1:4,16:20:45.13:518,45,0	1/1:3,8:9:18.05:208,18,0	0/0:23,0:23:60.03:0,60,549	0/0:40,1:41:70.41:0,70,893	0/0:26,0:26:48.87:0,49,521	1/1:2,17:19:48.01:520,48,0	1/1:3,21:24:63.17:715,63,0	1/1:3,12:15:30.09:346,30,0	1/1:1,4:5:12.04:138,12,0
chr10	54470703	.	TCA	T	1595.38	PASS	AB=0.919;AC=29;AF=0.558;AN=52;BaseQRankSum=-0.300;DP=563;FS=23.102;HRun=0;HaplotypeScore=89.9087;InbreedingCoeff=0.0751;MQ=61.24;MQ0=23;MQRankSum=2.156;QD=4.32;ReadPosRankSum=-2.996;VQSLOD=0.1753;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:6.45:0,6,49	0/0:8,0:7:2.50:0,2,9	./.	./.	0/1:16,1:18:14.49:122,0,14	0/1:14,0:19:23.34:23,0,37	1/1:20,2:18:11.86:111,12,0	0/0:18,0:18:2.97:0,3,20	1/1:6,2:11:14.77:125,15,0	1/1:19,0:21:9.84:98,10,0	0/0:8,0:9:6.01:0,6,70	0/1:18,1:18:24.85:25,0,223	0/1:7,0:7:22.56:23,0,71	1/1:9,7:16:14.70:125,15,0	1/1:8,8:16:6.01:65,6,0	0/1:18,1:18:60.83:105,0,61	0/1:27,0:24:10.05:10,0,132	0/0:23,0:20:11.81:0,12,76	1/1:15,3:17:8.54:54,9,0	1/1:9,5:13:1.29:29,1,0	0/1:32,2:32:2.65:186,0,3	0/0:11,3:14:6.02:0,6,89	0/0:16,0:16:3.05:0,3,125	0/1:39,3:40:99:140,0,444	0/1:22,1:24:23.42:180,0,23	1/1:11,3:13:8.64:56,9,0	1/1:8,9:17:4.99:247,5,0	1/1:6,0:6:2.98:32,3,0
chr10	54470711	.	A	ACACAT	1409.73	PASS	AB=0.848;AC=7;AF=0.125;AN=56;BaseQRankSum=-0.126;DP=569;FS=3.260;HRun=0;HaplotypeScore=116.8795;InbreedingCoeff=0.4782;MQ=53.20;MQ0=28;MQRankSum=0.546;QD=12.82;ReadPosRankSum=3.587;VQSLOD=3.0194;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:12,22:34:4:163,0,4	1/1:4,0:3:3.01:64,3,0	0/0:34,0:13:27.08:0,27,342	0/0:34,0:9:21.06:0,21,260	0/0:19,0:18:37.51:0,38,518	0/0:19,0:19:21.05:0,21,278	0/0:22,0:18:36.12:0,36,491	0/0:17,0:16:39.12:0,39,488	0/0:11,0:11:26.12:0,26,344	0/0:21,0:21:50.41:0,50,619	0/0:11,0:11:12.04:0,12,193	0/0:25,0:23:57.15:0,57,879	0/0:9,0:9:17.99:0,18,265	0/0:16,0:16:25.65:0,26,340	0/0:18,0:18:27.07:0,27,358	0/1:18,0:17:99:197,0,184	0/1:29,2:27:44.83:739,0,45	1/1:22,0:19:21.64:380,22,0	0/0:17,0:16:39:0,39,440	0/0:15,0:14:15.03:0,15,189	0/0:36,0:35:49.55:0,50,873	0/0:15,0:14:24.06:0,24,356	0/0:15,0:16:26.81:0,27,626	0/0:41,0:38:99:0,102,1668	0/0:22,0:22:56.96:0,57,725	0/0:16,0:15:39.06:0,39,479	0/0:18,0:18:45.15:0,45,625	0/0:5,0:5:11.99:0,12,134
chr10	54470715	.	A	AT	960.71	PASS	AB=0.790;AC=5;AF=0.089;AN=56;BaseQRankSum=2.069;DP=575;FS=8.249;HRun=0;HaplotypeScore=85.3646;InbreedingCoeff=-0.0868;MQ=52.43;MQ0=31;MQRankSum=0.404;QD=8.43;ReadPosRankSum=5.080;VQSLOD=2.8827;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:38,1:37:44.76:106,0,45	0/1:6,0:5:2.66:3,0,39	0/0:32,0:10:27.08:0,27,348	0/0:36,0:8:21.06:0,21,258	0/0:20,0:19:44.82:0,45,505	0/0:17,0:17:23.89:0,24,311	0/0:22,0:18:32.86:0,33,363	0/0:16,0:15:39.13:0,39,541	0/0:11,0:11:26.75:0,27,256	0/0:19,0:19:55.18:0,55,660	0/0:11,0:10:15.05:0,15,208	0/0:28,0:26:57.02:0,57,723	0/0:8,0:8:21.02:0,21,267	0/0:15,0:15:25.30:0,25,219	0/0:19,0:19:26.96:0,27,309	0/1:9,8:16:99:144,0,127	0/1:15,11:26:99:465,0,209	0/1:6,16:19:13.73:354,0,14	0/0:18,0:17:42.01:0,42,529	0/0:14,0:13:18.01:0,18,223	0/0:38,1:35:1.02:0,1,726	0/0:15,0:14:24.06:0,24,314	0/0:17,0:17:41.96:0,42,616	0/0:41,0:38:99:0,102,1279	0/0:22,0:22:59.70:0,60,640	0/0:15,0:14:42.02:0,42,519	0/0:21,0:21:53.64:0,54,536	0/0:4,0:4:11.89:0,12,100
chr10	54472528	.	TCACACACACACACA	T	1452.74	PASS	AB=0.917;AC=16;AF=0.364;AN=44;BaseQRankSum=4.854;DP=471;FS=4.483;HRun=0;HaplotypeScore=162.9898;InbreedingCoeff=0.4479;MQ=66.45;MQ0=7;MQRankSum=-4.560;QD=8.75;ReadPosRankSum=0.000;VQSLOD=2.2152;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:37:2.99:0,3,24	0/0:5,0:5:6.02:0,6,115	./.	./.	./.	1/1:9,3:13:9.03:330,9,0	0/0:15,0:14:0:0,0,0	0/1:29,0:29:6.11:11,0,6	./.	1/1:20,0:20:1.45:65,1,0	./.	0/0:9,0:9:6.02:0,6,264	0/0:11,0:11:3.01:0,3,194	1/1:18,8:26:17.85:696,18,0	1/1:22,4:25:6.02:232,6,0	0/1:8,0:9:5.74:6,0,93	1/1:19,0:19:2.98:22,3,0	0/0:8,0:8:3.01:0,3,73	0/0:10,0:9:6.02:0,6,231	0/0:11,0:11:9.03:0,9,432	0/0:27,0:27:21.07:0,21,758	0/0:10,0:10:9.03:0,9,492	./.	0/0:34,0:34:39.13:0,39,1998	1/1:12,2:14:2.94:115,3,0	0/0:22,0:22:4.26:0,4,13	0/0:13,0:14:12.01:0,12,333	1/1:8,1:9:2.75:116,3,0
chr10	54472689	.	AGAGG	A	12185.08	PASS	AB=0.756;AC=32;AF=0.571;AN=56;BaseQRankSum=11.896;DP=575;FS=0.808;HRun=0;HaplotypeScore=101.3182;InbreedingCoeff=0.8699;MQ=71.93;MQ0=4;MQRankSum=-1.678;QD=30.85;ReadPosRankSum=2.940;VQSLOD=4.5415;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:75.18:0,75,1720	0/0:7,0:7:21.07:0,21,480	0/0:22,0:21:30.07:0,30,611	0/0:35,0:28:38.34:0,38,570	1/1:5,27:32:81.19:1337,81,0	1/1:2,20:22:48.16:811,48,0	0/1:6,16:22:2.27:475,0,2	1/1:13,24:36:63.02:819,63,0	1/1:5,17:21:36.12:611,36,0	1/1:4,18:22:54.15:840,54,0	1/1:4,12:16:33.11:559,33,0	0/0:12,0:12:30.07:0,30,637	0/0:15,0:15:33.06:0,33,692	1/1:6,25:30:42.14:711,42,0	1/1:5,23:28:54.18:915,54,0	0/1:13,1:14:71.19:71,0,567	0/0:19,0:19:45.14:0,45,1054	0/0:5,0:5:9.02:0,9,176	1/1:3,13:15:39.08:582,39,0	1/1:0,14:14:42.14:692,42,0	1/1:10,33:43:78.27:1322,78,0	0/0:13,0:13:30.09:0,30,668	0/0:7,0:7:21.05:0,21,425	0/0:15,0:15:36.04:0,36,704	1/1:3,14:17:39.13:661,39,0	1/1:7,17:24:51.15:815,51,0	1/1:3,18:21:39.13:660,39,0	1/1:7,7:14:18.06:305,18,0
chr10	54472838	.	TC	T	16300.52	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=5.408;DP=587;FS=3.255;HRun=2;HaplotypeScore=64.1538;InbreedingCoeff=0.9940;MQ=84.88;MQ0=0;MQRankSum=-5.802;QD=35.59;ReadPosRankSum=1.543;VQSLOD=5.4832;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,40:40:99:1441,111,0	1/1:1,5:6:12.04:156,12,0	0/0:16,0:16:48.05:0,48,623	0/0:24,0:24:68.20:0,68,923	1/1:0,18:18:45.15:584,45,0	1/1:0,15:15:45.15:584,45,0	1/1:0,14:14:33.11:428,33,0	1/1:0,40:40:99:1542,120,0	1/1:0,18:18:51.17:662,51,0	1/1:0,22:22:57.17:725,57,0	1/1:1,23:24:63.20:818,63,0	0/0:15,0:15:45.14:0,45,650	0/0:20,0:20:57.18:0,57,833	1/1:0,19:19:54.18:701,54,0	1/1:0,17:17:51.17:662,51,0	1/1:0,18:18:48.16:623,48,0	1/1:0,32:32:87.28:1129,87,0	1/1:0,12:12:30.10:390,30,0	1/1:1,33:34:99:1240,99,0	1/1:0,24:24:54.18:701,54,0	1/1:1,27:28:78.25:1013,78,0	0/0:10,0:10:27.09:0,27,403	0/0:13,0:13:39.13:0,39,584	0/0:31,0:31:84.28:0,84,1259	1/1:0,15:15:42.14:545,42,0	1/1:0,21:21:63.16:798,63,0	1/1:0,29:29:87.28:1129,87,0	1/1:0,12:12:33.11:428,33,0
chr10	54475581	.	T	TTCC	3705.12	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=10.043;DP=672;FS=1.648;HRun=0;HaplotypeScore=108.1868;InbreedingCoeff=0.9902;MQ=73.50;MQ0=9;MQRankSum=0.146;QD=33.68;ReadPosRankSum=-0.082;VQSLOD=3.7385;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:31:49.12:0,49,682	0/0:14,0:14:30.09:0,30,410	0/0:32,0:21:13.58:0,14,162	0/0:30,0:21:17:0,17,146	0/0:22,0:22:57.19:0,57,809	0/0:27,0:27:66.18:0,66,915	0/0:25,0:25:48.12:0,48,616	0/0:34,0:33:35.48:0,35,462	0/0:22,0:22:51.09:0,51,703	0/0:25,0:25:54.13:0,54,704	0/0:17,0:17:39.13:0,39,555	0/0:28,0:28:75.24:0,75,1047	0/0:21,0:21:57.19:0,57,810	0/0:17,0:17:36.09:0,36,475	0/0:14,0:14:27.08:0,27,367	0/0:28,0:28:60.19:0,60,833	0/0:22,0:21:38.90:0,39,476	0/0:27,0:27:55.33:0,55,722	1/1:11,17:29:57.15:971,57,0	1/1:5,17:22:45.15:888,45,0	1/1:6,22:28:45.15:911,45,0	0/0:16,0:16:36.12:0,36,512	0/0:22,0:22:60.20:0,60,854	0/0:27,0:25:72.23:0,72,1002	0/0:25,0:24:63.21:0,63,891	0/0:21,0:21:51.17:0,51,714	1/1:6,23:29:48.16:935,48,0	0/0:13,0:13:27.06:0,27,346
chr10	54475641	.	TTCC	T	2001.99	PASS	AB=0.705;AC=5;AF=0.089;AN=56;BaseQRankSum=7.867;DP=788;FS=4.821;HRun=0;HaplotypeScore=126.7376;InbreedingCoeff=-0.0981;MQ=58.12;MQ0=20;MQRankSum=0.057;QD=11.25;ReadPosRankSum=0.353;VQSLOD=3.3040;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:28,26:54:99:608,0,1039	0/1:9,5:14:99:117,0,298	0/0:49,0:16:34.35:0,34,541	0/0:58,0:20:35.09:0,35,559	0/0:29,0:29:75.26:0,75,1511	0/0:23,0:23:57.18:0,57,1085	0/0:23,0:22:54.18:0,54,1059	0/0:28,0:27:54.18:0,54,1053	0/0:27,0:27:72.22:0,72,1419	0/0:25,0:25:57.19:0,57,1119	0/0:28,1:28:30.10:0,30,1434	0/0:23,0:22:54.17:0,54,1068	0/0:24,0:23:57.20:0,57,1158	0/0:13,0:13:33.11:0,33,639	0/0:19,0:19:54.19:0,54,1137	0/1:21,16:35:99:556,0,499	0/1:21,20:40:99:537,0,869	0/1:21,11:31:99:301,0,746	0/0:21,0:21:54.17:0,54,1035	0/0:25,0:25:45.15:0,45,897	0/0:38,0:38:99:0,99,1993	0/0:24,0:24:57.20:0,57,1199	0/0:19,0:19:42.14:0,42,855	0/0:33,0:33:90.29:0,90,1777	0/0:25,0:25:66.22:0,66,1310	0/0:23,0:23:54.18:0,54,1084	0/0:22,0:22:54.19:0,54,1115	0/0:9,0:9:27.09:0,27,548
chr10	54478080	.	AGCT	A	12563.43	PASS	AB=0.511;AC=23;AF=0.411;AN=56;BaseQRankSum=15.792;DP=653;FS=3.827;HRun=0;HaplotypeScore=97.8763;InbreedingCoeff=0.9361;MQ=80.33;MQ0=0;MQRankSum=-6.032;QD=46.70;ReadPosRankSum=-0.071;VQSLOD=6.8345;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,154,3557	0/0:10,0:10:30.09:0,30,661	0/0:14,0:14:42.14:0,42,966	0/0:22,0:22:63.22:0,63,1425	1/1:0,20:20:51.07:862,51,0	1/1:0,21:21:60.12:1022,60,0	1/1:0,16:16:45.15:793,45,0	1/1:1,23:24:66.23:1155,66,0	1/1:2,18:20:48.16:844,48,0	1/1:1,35:36:99:1858,108,0	1/1:0,21:21:57.19:990,57,0	0/0:26,0:26:78.27:0,78,1843	0/0:30,0:30:90.30:0,90,2071	0/1:1,22:23:7.82:958,0,8	1/1:1,30:31:87.04:1426,87,0	0/0:25,0:25:75.24:0,75,1663	0/0:22,0:22:66.23:0,66,1555	0/0:13,0:13:39.13:0,39,922	0/0:29,0:29:84.28:0,84,1933	0/0:33,0:33:93.32:0,93,2167	0/0:15,0:15:42.14:0,42,968	0/0:20,0:20:60.21:0,60,1419	0/0:25,0:25:75.24:0,75,1727	0/0:18,0:18:54.19:0,54,1277	1/1:0,21:21:53.50:844,54,0	1/1:0,29:29:87.26:1440,87,0	0/0:30,0:30:90.31:0,90,2126	1/1:0,7:7:21.07:370,21,0
chr10	54478217	.	T	TGG	837.62	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=2.505;DP=514;FS=33.224;HRun=8;HaplotypeScore=65.0430;InbreedingCoeff=0.9784;MQ=77.56;MQ0=0;MQRankSum=-3.109;QD=13.51;ReadPosRankSum=-1.171;VQSLOD=-0.5832;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:81.17:0,81,881	0/0:8,0:8:24.05:0,24,257	0/0:20,0:19:29.32:0,29,377	0/0:13,0:11:26.61:0,27,245	0/0:28,0:29:80.85:0,81,845	0/0:32,0:32:90.21:0,90,984	0/0:16,0:16:36.04:0,36,379	0/0:21,0:21:39.06:0,39,421	0/0:10,0:10:27.07:0,27,300	0/0:24,0:25:53.86:0,54,566	0/0:31,0:31:87.22:0,87,958	0/0:19,0:19:51.12:0,51,559	0/0:19,0:22:50.56:0,51,513	0/0:14,0:14:42.10:0,42,459	0/0:18,0:18:54.14:0,54,599	0/0:16,0:16:45.10:0,45,493	0/0:18,0:18:45.12:0,45,502	0/0:4,0:4:11.99:0,12,120	1/1:6,3:10:12.77:159,13,0	1/1:13,4:19:23:264,23,0	1/1:6,2:10:16.60:148,17,0	0/0:17,0:17:51.04:0,51,523	0/0:19,0:19:48.12:0,48,534	0/0:14,0:14:42.09:0,42,457	0/0:19,0:19:51.09:0,51,555	0/0:27,0:27:63.14:0,63,694	1/1:7,14:23:28.64:423,29,0	0/0:11,0:11:33.09:0,33,368
chr10	54479843	.	G	GA	2242.68	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-7.993;DP=611;FS=5.195;HRun=7;HaplotypeScore=55.5961;InbreedingCoeff=0.9408;MQ=58.28;MQ0=8;MQRankSum=0.227;QD=24.38;ReadPosRankSum=0.046;VQSLOD=3.9692;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,108,1033	0/0:5,0:5:15.02:0,15,145	0/0:15,0:3:9.01:0,9,87	0/0:15,0:10:4.17:0,4,179	0/0:25,0:25:69.10:0,69,665	0/0:26,0:26:66.09:0,66,632	0/0:19,0:19:35.85:0,36,323	0/0:18,0:18:44.45:0,44,433	0/0:29,0:28:81.13:0,81,782	0/0:25,0:25:50.49:0,50,515	0/0:24,0:23:48.07:0,48,464	0/0:20,0:20:51.06:0,51,486	0/0:18,0:18:48.08:0,48,463	0/0:21,0:21:60.10:0,60,579	0/0:27,0:27:69.09:0,69,661	0/0:15,0:15:42.04:0,42,395	0/0:27,0:27:72.11:0,72,695	0/0:25,0:24:66.10:0,66,637	1/1:6,13:19:42.09:484,42,0	1/1:6,29:35:78.15:904,78,0	1/1:2,10:12:27.08:326,27,0	0/0:23,0:23:60.07:0,60,568	0/0:23,0:23:63.07:0,63,596	0/0:28,0:28:69.11:0,69,665	0/0:20,0:20:54.02:0,54,497	0/0:23,0:23:54.08:0,54,521	1/1:3,23:26:57.17:688,57,0	0/0:9,0:9:27.04:0,27,261
chr10	54482126	.	ATCTCTCTC	A	567.94	PASS	AB=0.869;AC=15;AF=0.313;AN=48;BaseQRankSum=2.720;DP=667;FS=1.015;HRun=0;HaplotypeScore=178.2684;InbreedingCoeff=0.3287;MQ=58.24;MQ0=18;MQRankSum=-2.913;QD=2.61;ReadPosRankSum=-0.019;VQSLOD=2.7378;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:23,0:14:0:0,0,0	./.	0/0:22,0:26:2.91:0,3,22	./.	0/1:15,2:18:3.15:3,0,8	0/0:44,0:42:6.70:0,7,20	1/1:24,1:26:1.23:2,1,0	0/1:18,0:18:14.63:15,0,24	0/1:9,3:13:0:0,0,0	0/0:26,0:26:11.34:0,11,305	0/0:17,0:19:3.48:0,3,107	0/1:22,0:22:6.01:6,0,107	1/1:25,9:35:9.17:123,9,0	1/1:10,0:23:15.04:248,15,0	0/0:12,0:11:6:0,6,67	0/1:13,0:13:0:0,0,0	0/0:25,0:23:9.49:0,9,271	0/0:31,0:32:9.50:0,10,311	0/0:44,0:44:54.14:0,54,1315	0/0:23,0:22:6.02:0,6,152	0/0:28,0:27:9:0,9,171	0/0:36,0:33:33.54:0,34,929	0/1:16,1:21:0:0,0,0	0/1:12,4:16:73.99:223,0,74	0/0:19,0:20:17.43:0,17,454	1/1:4,3:5:3.01:74,3,0
chr10	54482422	.	TA	T	2871.33	PASS	AB=0.807;AC=34;AF=0.607;AN=56;BaseQRankSum=4.245;DP=571;FS=0.000;HRun=13;HaplotypeScore=57.5961;InbreedingCoeff=0.4981;MQ=66.58;MQ0=21;MQRankSum=3.318;QD=6.31;ReadPosRankSum=0.778;VQSLOD=1.8891;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:16,1:17:2.26:2,0,281	0/0:5,0:6:17.86:0,18,160	0/1:84,0:14:0.75:1,0,37	0/1:73,0:21:10.88:11,0,70	0/1:5,13:21:16.16:181,0,16	1/1:0,8:8:17.90:131,18,0	1/1:2,9:11:23.82:171,24,0	1/1:5,10:16:30.88:206,31,0	1/1:4,8:12:17.84:127,18,0	1/1:8,11:19:32.75:236,33,0	0/1:5,11:17:0.33:151,0,0	0/0:19,0:19:29.87:0,30,395	0/0:15,0:16:26.57:0,27,282	1/1:1,9:10:8.94:66,9,0	1/1:2,12:14:26.08:182,26,0	0/0:17,1:18:25.97:0,26,386	0/0:23,0:23:43.74:0,44,474	0/1:16,1:17:2.21:2,0,210	0/1:9,16:25:22.10:279,0,22	1/1:6,18:26:54.74:383,55,0	1/1:1,1:2:2.98:22,3,0	0/0:13,0:13:27.85:0,28,252	0/0:18,0:20:50.74:0,51,460	0/1:13,4:17:51.98:52,0,213	1/1:3,14:18:31.85:225,32,0	1/1:4,13:18:40.97:288,41,0	1/1:8,16:24:38.75:284,39,0	1/1:0,4:4:8.95:66,9,0
chr10	54484501	.	TG	T	6692.42	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=0.390;DP=372;FS=0.500;HRun=8;HaplotypeScore=65.9579;InbreedingCoeff=0.9758;MQ=84.78;MQ0=0;MQRankSum=0.124;QD=24.07;ReadPosRankSum=5.049;VQSLOD=5.2716;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,20:23:60.09:578,60,0	1/1:0,10:10:20.91:203,21,0	0/0:18,0:18:29.89:0,30,299	0/0:17,0:16:11.71:0,12,152	1/1:1,15:16:42.07:406,42,0	1/1:2,11:13:27.04:261,27,0	1/1:3,17:20:48.07:463,48,0	1/1:0,15:15:42.07:404,42,0	1/1:2,10:12:30.04:290,30,0	1/1:1,9:10:24.04:232,24,0	1/1:3,8:11:24.04:232,24,0	0/0:20,0:21:63.05:0,63,728	0/0:15,0:15:25.24:0,25,375	1/1:1,9:10:30.05:289,30,0	1/1:2,11:13:33.05:318,33,0	1/1:3,14:17:42.07:406,42,0	1/1:0,15:15:42.07:406,42,0	1/1:0,8:8:21.02:197,21,0	1/1:7,7:14:26.71:243,27,0	1/1:2,14:16:42.06:404,42,0	1/1:4,11:15:30.93:291,31,0	0/0:10,0:10:30.08:0,30,350	0/0:10,0:10:27.06:0,27,300	0/0:3,0:3:9.03:0,9,109	1/1:0,8:8:21.03:202,21,0	1/1:1,10:11:27.04:261,27,0	1/1:0,16:16:48.08:463,48,0	1/1:0,5:5:15.02:145,15,0
chr10	54486682	.	A	AT	14905.95	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=-13.682;DP=575;FS=11.244;HRun=3;HaplotypeScore=50.5159;InbreedingCoeff=0.9982;MQ=81.99;MQ0=0;MQRankSum=-4.937;QD=34.03;ReadPosRankSum=3.728;VQSLOD=4.4920;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,25:27:66.18:899,66,0	1/1:1,6:7:17.97:226,18,0	0/0:23,0:23:53.95:0,54,538	0/0:19,0:19:50.87:0,51,505	1/1:2,25:27:78.19:1057,78,0	1/1:1,21:22:57.66:797,58,0	1/1:2,12:14:36.12:503,36,0	1/1:2,29:31:87.24:1162,87,0	1/1:1,12:13:33.10:448,33,0	1/1:3,24:27:72.19:935,72,0	1/1:2,17:19:53.69:639,54,0	0/0:14,0:14:33.09:0,33,383	0/0:14,0:14:36.09:0,36,418	1/1:1,20:21:45.15:628,45,0	1/1:0,16:16:36.12:502,36,0	1/1:0,15:15:36.12:503,36,0	1/1:0,20:20:45.15:628,45,0	1/1:1,19:20:39.13:542,39,0	1/1:1,17:18:51.11:632,51,0	1/1:3,15:18:42.09:551,42,0	1/1:0,15:15:33.11:461,33,0	0/0:20,0:20:57.11:0,57,621	0/0:24,0:24:72.20:0,72,848	0/0:23,0:23:66.20:0,66,790	1/1:0,11:11:30.10:419,30,0	1/1:0,39:39:99:1617,117,0	1/1:1,32:31:78.26:1087,78,0	1/1:1,24:25:48.16:669,48,0
chr10	54487956	.	CA	C	2160.73	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=11.660;DP=544;FS=0.000;HRun=9;HaplotypeScore=117.0596;InbreedingCoeff=0.9538;MQ=74.58;MQ0=0;MQRankSum=-3.615;QD=5.01;ReadPosRankSum=3.899;VQSLOD=0.6996;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:38,4:42:68.10:321,68,0	1/1:8,0:8:3.91:36,4,0	0/0:23,0:22:26.78:0,27,272	0/0:11,0:10:18.04:0,18,191	1/1:22,0:22:36.89:109,37,0	1/1:25,0:24:39.59:118,40,0	1/1:24,0:24:44.04:132,44,0	1/1:28,0:28:45.99:170,46,0	1/1:19,0:19:28.68:86,29,0	1/1:24,0:24:38.84:144,39,0	1/1:17,0:17:27.04:98,27,0	0/0:16,0:16:42.12:0,42,485	0/0:22,0:22:45.12:0,45,509	1/1:11,0:11:15.54:46,16,0	1/1:16,0:16:22.02:66,22,0	1/1:14,1:15:20.24:86,20,0	1/1:14,1:15:28.47:123,28,0	1/1:30,0:30:49.82:186,50,0	1/1:24,0:24:40.37:136,40,0	1/1:17,0:17:21.75:88,22,0	1/1:11,0:11:10.28:29,10,0	0/0:14,0:14:39.09:0,39,431	0/0:16,0:16:36.09:0,36,405	0/0:11,0:11:27.07:0,27,302	1/1:31,0:31:43.67:130,44,0	1/1:21,0:21:37.07:128,37,0	1/1:23,0:23:30.39:91,30,0	1/1:8,0:8:13.32:40,13,0
chr10	54487962	.	AAAAT	A	12097.85	PASS	AB=1.000;AC=34;AF=0.607;AN=56;BaseQRankSum=-1.577;DP=523;FS=3.329;HRun=0;HaplotypeScore=108.4492;InbreedingCoeff=0.8253;MQ=72.52;MQ0=0;MQRankSum=-2.935;QD=32.70;ReadPosRankSum=-0.413;VQSLOD=4.7753;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:41,0:41:58:58,0,491	0/0:7,0:7:17.83:0,18,128	0/0:18,0:18:10.58:0,11,549	0/0:13,0:12:20.21:0,20,464	1/1:0,25:25:63.02:963,63,0	1/1:2,24:26:54.18:952,54,0	1/1:0,26:26:60.21:1057,60,0	1/1:1,24:25:66.17:1059,66,0	1/1:0,19:19:39.13:687,39,0	1/1:2,19:21:54.13:858,54,0	1/1:0,16:16:44.63:655,45,0	0/0:15,0:15:45.15:0,45,1067	0/0:17,0:17:45.13:0,45,1034	1/1:0,13:13:21.07:371,21,0	1/1:0,15:15:29.71:529,30,0	0/1:13,0:13:5.60:6,0,133	0/0:15,0:15:1.88:0,2,182	0/0:26,0:26:58.57:0,59,427	1/1:2,22:24:69.08:994,69,0	1/1:2,12:14:36.11:593,36,0	1/1:0,11:11:18.02:280,18,0	0/0:14,0:14:42.13:0,42,1031	0/0:14,0:14:36.12:0,36,862	0/0:13,0:13:36.08:0,36,761	1/1:1,28:29:60.20:1055,60,0	1/1:0,21:21:57.15:926,57,0	1/1:2,21:23:41.83:738,42,0	1/1:1,7:8:18.06:318,18,0
chr10	54487963	.	A	AAT	3978.97	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=-7.018;DP=520;FS=0.436;HRun=0;HaplotypeScore=121.5918;InbreedingCoeff=0.7149;MQ=71.82;MQ0=0;MQRankSum=1.786;QD=24.26;ReadPosRankSum=0.240;VQSLOD=4.1767;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,34:43:92.76:1560,93,0	1/1:0,7:7:17.82:299,18,0	0/0:18,0:17:32.81:0,33,369	0/0:13,0:12:26.54:0,27,302	0/0:25,0:25:50:0,50,272	0/0:25,0:24:48.83:0,49,240	0/0:26,0:26:52.85:0,53,262	0/1:25,0:25:9.27:9,0,202	0/0:19,0:19:35.34:0,35,174	0/1:19,0:19:6.69:7,0,144	0/0:16,0:16:12.06:0,12,164	0/0:15,0:15:45.11:0,45,627	0/0:16,0:16:45.13:0,45,614	0/0:13,0:13:19.89:0,20,100	0/0:15,0:15:26.55:0,27,131	1/1:2,11:13:27.09:466,27,0	1/1:1,15:16:32.92:575,33,0	1/1:0,27:27:60.21:1054,60,0	0/0:24,0:24:12.51:0,13,224	0/1:13,0:14:8.95:9,0,116	0/0:11,0:11:15.64:0,16,76	0/0:14,0:14:42.12:0,42,573	0/0:14,0:14:36.11:0,36,485	0/0:13,0:13:36.08:0,36,452	0/0:29,0:29:50.44:0,50,240	0/0:21,0:21:18.45:0,18,185	0/0:22,0:22:37.46:0,37,183	0/0:7,0:7:17.04:0,17,86
chr10	54488732	.	GTGCA	G	683.68	PASS	AB=0.926;AC=22;AF=0.478;AN=46;BaseQRankSum=6.693;DP=464;FS=4.151;HRun=0;HaplotypeScore=102.6057;InbreedingCoeff=0.4327;MQ=57.24;MQ0=10;MQRankSum=-4.138;QD=4.99;ReadPosRankSum=-0.808;VQSLOD=2.0843;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:2.17:0,2,378	0/0:5,0:5:9.03:0,9,143	0/0:69,0:26:10.97:0,11,880	0/0:66,0:33:32.27:0,32,1110	./.	./.	1/1:13,0:12:3.01:35,3,0	1/1:10,0:7:12.77:99,13,0	1/1:5,0:5:2.90:17,3,0	0/1:9,0:7:4.87:84,0,5	0/1:1,4:5:0:0,0,0	0/0:29,0:29:84.24:0,84,1856	0/0:16,0:16:44.88:0,45,1074	./.	./.	0/1:22,0:21:74.90:75,0,178	0/1:16,0:16:70.54:71,0,212	0/1:7,0:7:44.33:44,0,151	1/1:5,0:5:11.07:122,11,0	./.	0/1:19,0:18:0:0,0,0	0/0:24,0:24:57.19:0,57,1469	0/0:15,0:15:36.10:0,36,760	0/0:39,0:39:82.83:0,83,2472	1/1:11,0:11:5.62:28,6,0	1/1:6,0:4:9.03:119,9,0	1/1:7,0:7:6.49:84,6,0	1/1:2,0:2:5.99:64,6,0
chr10	54488734	.	GCA	G	1000.63	PASS	AB=0.866;AC=21;AF=0.457;AN=46;BaseQRankSum=6.973;DP=456;FS=2.103;HRun=0;HaplotypeScore=92.0273;InbreedingCoeff=0.3966;MQ=59.49;MQ0=10;MQRankSum=-5.151;QD=7.15;ReadPosRankSum=-0.730;VQSLOD=2.6593;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:28,5:33:19.66:20,0,385	0/0:5,0:5:9.03:0,9,129	0/0:70,1:27:13.20:0,13,888	0/0:63,0:33:61.59:0,62,1054	./.	./.	1/1:0,13:12:3.01:35,3,0	1/1:0,8:5:12.04:170,12,0	1/1:0,5:5:3.01:35,3,0	0/1:6,1:5:2.18:88,0,2	0/0:4,0:4:0:0,0,0	0/0:30,0:30:87.09:0,87,1501	0/0:16,1:17:47.74:0,48,882	./.	./.	0/1:16,5:20:99:153,0,130	0/1:16,0:16:99:108,0,192	0/1:5,2:7:76.62:77,0,112	1/1:0,5:5:11.99:137,12,0	./.	0/0:0,16:15:0:0,0,0	0/0:24,0:24:57.19:0,57,1131	0/0:15,0:15:35.78:0,36,584	0/0:39,0:39:88.65:0,89,2007	1/1:0,10:10:5.91:54,6,0	1/1:0,6:4:9.03:121,9,0	1/1:0,7:7:6.49:86,6,0	1/1:0,2:2:6.02:76,6,0
chr10	54488745	.	AGT	A	893.93	PASS	AB=0.850;AC=12;AF=0.300;AN=40;BaseQRankSum=5.585;DP=431;FS=5.007;HRun=0;HaplotypeScore=90.3895;InbreedingCoeff=0.6007;MQ=59.33;MQ0=13;MQRankSum=-1.888;QD=9.82;ReadPosRankSum=0.288;VQSLOD=2.8162;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,21:33:26.55:344,27,0	1/1:1,5:6:12.04:152,12,0	0/0:83,0:30:43.46:0,43,889	0/0:69,0:31:45.44:0,45,605	./.	./.	./.	0/0:6,0:3:0.47:0,0,1	0/1:3,0:3:0:0,0,0	0/0:4,0:2:0:0,0,0	./.	0/0:28,0:28:78.20:0,78,1221	0/0:20,0:20:48.07:0,48,675	./.	./.	0/1:12,9:20:65.21:142,0,65	1/1:10,7:17:21.54:268,22,0	1/1:4,3:7:8.93:112,9,0	0/0:4,0:4:3.41:0,3,21	./.	./.	0/0:20,0:20:44.87:0,45,682	0/0:15,0:15:30.10:0,30,495	0/0:35,0:35:93.23:0,93,1404	0/0:6,0:6:0:0,0,0	0/0:5,0:3:0.47:0,0,2	1/1:4,0:4:2.08:7,2,0	0/0:2,0:2:1.72:0,2,4
chr10	54488757	.	TGAGAGA	T	363.80	PASS	AB=0.978;AC=14;AF=0.333;AN=42;BaseQRankSum=6.742;DP=396;FS=15.656;HRun=0;HaplotypeScore=113.9379;InbreedingCoeff=0.5461;MQ=64.94;MQ0=8;MQRankSum=-4.390;QD=8.08;ReadPosRankSum=-4.022;VQSLOD=-0.3123;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:40.74:0,41,974	0/0:8,0:8:18.06:0,18,373	0/0:72,0:37:74.89:0,75,2691	0/0:77,0:36:62.65:0,63,1687	./.	./.	./.	./.	1/1:0,1:1:3.01:40,3,0	1/1:3,1:2:6.02:99,6,0	./.	0/0:31,0:31:81.28:0,81,2888	0/0:18,0:18:51.18:0,51,1613	./.	./.	0/1:21,0:21:6.40:6,0,295	0/0:14,0:14:26.08:0,26,573	0/1:7,0:7:42.55:43,0,229	1/1:2,0:2:3.01:61,3,0	0/0:3,1:4:0:0,0,0	0/0:7,3:9:0.47:0,0,1	0/0:19,0:19:45.15:0,45,1579	0/0:14,0:14:33.11:0,33,1174	0/0:32,0:32:93.31:0,93,3125	0/0:4,1:5:0:0,0,0	1/1:5,0:3:6.02:111,6,0	1/1:2,0:2:3.48:56,3,0	1/1:1,1:2:5.99:83,6,0
chr10	54488758	.	GAGAGAGTC	G	541.65	PASS	AB=0.847;AC=14;AF=0.333;AN=42;BaseQRankSum=6.895;DP=376;FS=8.839;HRun=0;HaplotypeScore=117.5746;InbreedingCoeff=0.5129;MQ=66.16;MQ0=8;MQRankSum=-4.375;QD=14.25;ReadPosRankSum=-4.472;VQSLOD=0.0913;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:40.72:0,41,1331	0/0:8,0:8:18.06:0,18,518	0/0:70,0:36:72.75:0,73,3203	0/0:75,0:37:65.50:0,65,1946	./.	./.	./.	./.	1/1:1,0:1:3.01:59,3,0	1/1:2,0:2:6.02:138,6,0	./.	0/0:30,0:30:81.28:0,81,3562	0/0:17,0:17:51.16:0,51,1916	./.	./.	0/1:14,4:18:70.54:71,0,406	0/0:12,0:12:11.19:0,11,725	0/1:6,1:7:59.81:60,0,257	1/1:2,0:2:3.48:82,3,0	0/0:4,0:4:0:0,0,0	0/0:10,0:9:0.47:0,0,1	0/0:18,0:18:45.15:0,45,1970	0/0:14,0:14:33.11:0,33,1510	0/0:31,0:31:93.29:0,93,3728	0/0:5,0:5:0:0,0,0	1/1:5,0:3:6.02:110,6,0	1/1:2,0:2:3.90:75,4,0	1/1:1,0:1:3.01:83,3,0
chr10	54488797	.	AGTGTGTGTGTGTGTGAGTGTGT	A	1308.35	PASS	AB=0.938;AC=10;AF=0.179;AN=56;BaseQRankSum=2.963;DP=401;FS=36.765;HRun=0;HaplotypeScore=175.4031;InbreedingCoeff=0.4519;MQ=50.17;MQ0=16;MQRankSum=-0.702;QD=10.99;ReadPosRankSum=1.531;VQSLOD=1.3948;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:35,1:35:44.36:490,44,0	1/1:7,0:7:11.93:115,12,0	0/0:27,0:10:0.89:0,1,3	0/0:36,0:11:2.50:0,2,9	0/1:7,0:6:0:0,0,0	0/0:6,0:5:5.72:0,6,95	0/0:9,0:6:3.10:0,3,35	0/0:11,0:9:24.52:0,25,310	0/1:5,0:5:0:0,0,0	0/0:10,0:9:23.94:0,24,364	0/0:3,0:3:3.01:0,3,32	0/0:30,0:30:75.27:0,75,3609	0/0:18,0:17:45.57:0,46,1985	0/0:9,0:8:9.03:0,9,138	0/0:6,0:6:9.03:0,9,144	1/1:12,12:24:18.34:476,18,0	0/1:20,10:27:94.28:282,0,94	0/1:10,0:10:53.84:86,0,54	0/0:7,0:7:21.07:0,21,350	0/0:4,0:4:6.02:0,6,95	0/0:24,0:19:14.39:0,14,236	0/0:15,0:15:30.55:0,31,1938	0/0:15,0:15:36.08:0,36,1762	0/0:37,0:36:75.18:0,75,4110	0/0:3,0:3:2.89:0,3,49	0/0:4,0:4:6.02:0,6,101	0/0:6,0:6:11.83:0,12,180	0/0:2,0:1:1.55:0,2,4
chr10	54488813	.	AGTGTGT	A	331.93	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=4.762;DP=448;FS=7.516;HRun=0;HaplotypeScore=114.7716;InbreedingCoeff=0.4248;MQ=44.33;MQ0=22;MQRankSum=-0.980;QD=2.04;ReadPosRankSum=-1.330;VQSLOD=1.3660;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:39,1:38:12.46:162,12,0	1/1:7,0:7:6.02:96,6,0	0/0:14,0:2:2.97:0,3,20	0/0:20,0:2:5.96:0,6,49	0/1:9,0:8:0:0,0,0	0/0:11,0:11:3.45:0,3,26	0/0:14,0:11:1.84:0,2,20	0/0:21,0:18:34.38:0,34,218	0/0:8,0:8:1.03:0,1,4	0/0:12,0:11:8.70:0,9,76	1/1:3,0:3:2.04:6,2,0	0/0:30,0:30:50.36:0,50,1184	0/0:23,0:23:42.61:0,43,790	0/0:11,0:10:2.50:0,2,24	0/0:11,0:11:3.44:0,3,21	1/1:17,0:17:8.30:117,8,0	0/1:32,0:29:45.67:46,0,61	1/1:11,5:15:0.51:36,1,0	0/0:12,0:11:7.68:0,8,72	0/0:8,0:8:3:0,3,25	0/1:33,0:28:0.35:0,0,0	0/0:17,0:17:38.98:0,39,893	0/0:16,0:17:36.10:0,36,796	0/0:37,0:37:66.18:0,66,1599	1/1:6,0:6:1.41:3,1,0	0/0:8,0:8:6.42:0,6,47	0/0:8,0:8:3.94:0,4,47	0/0:2,0:1:1.55:0,2,4
chr10	54489622	.	CAT	C	14002.42	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=13.854;DP=692;FS=0.285;HRun=0;HaplotypeScore=85.2357;InbreedingCoeff=0.9951;MQ=90.48;MQ0=5;MQRankSum=-4.762;QD=37.04;ReadPosRankSum=2.537;VQSLOD=7.1660;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,163,2941	0/0:8,0:8:21.07:0,21,385	0/0:34,0:34:93.27:0,93,1587	0/0:20,0:20:60.13:0,60,935	1/1:0,24:24:63.21:902,63,0	1/1:0,18:18:51.17:730,51,0	1/1:3,25:28:66.22:946,66,0	1/1:2,30:32:90.30:1287,90,0	1/1:3,20:23:54.18:773,54,0	1/1:1,34:34:96.31:1353,96,0	1/1:1,16:16:39.13:559,39,0	0/0:29,0:29:87.30:0,87,1581	0/0:22,0:22:66.01:0,66,1160	1/1:2,16:18:45.15:645,45,0	1/1:1,26:27:72.24:1031,72,0	0/0:26,0:26:78.27:0,78,1430	0/0:25,0:25:72.23:0,72,1288	0/0:20,0:20:57.20:0,57,1024	1/1:3,18:20:48.16:687,48,0	1/1:2,33:34:93.31:1332,93,0	1/1:2,26:28:75.25:1074,75,0	0/0:25,0:25:69.22:0,69,1229	0/0:24,0:24:69.24:0,69,1251	0/0:26,0:26:72.25:0,72,1319	1/1:0,20:20:57.19:817,57,0	1/1:0,21:21:63.18:881,63,0	1/1:4,22:25:57.19:813,57,0	1/1:0,5:5:12.04:172,12,0
chr10	54490053	.	ATTT	A	11766.95	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=15.256;DP=601;FS=1.470;HRun=10;HaplotypeScore=138.6639;InbreedingCoeff=0.9944;MQ=77.02;MQ0=0;MQRankSum=-3.496;QD=33.33;ReadPosRankSum=1.411;VQSLOD=3.3848;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:2,0:33:95.64:0,96,744	0/0:2,0:12:29.86:0,30,229	0/0:21,0:23:35.59:0,36,645	0/0:15,0:15:19.93:0,20,354	1/1:3,26:29:63.17:845,63,0	1/1:1,20:21:57.19:778,57,0	1/1:0,11:11:24.08:327,24,0	1/1:5,18:23:54.15:716,54,0	1/1:2,14:16:30.10:409,30,0	1/1:1,28:29:78.20:1027,78,0	1/1:3,21:24:57.17:778,57,0	0/0:27,0:28:78.25:0,78,1561	0/0:21,0:21:54.19:0,54,1118	1/1:0,14:14:42.14:573,42,0	1/1:1,26:27:63.20:853,63,0	0/0:1,0:25:59.28:0,59,446	0/0:3,0:18:41.84:0,42,325	0/0:1,0:6:11.95:0,12,93	1/1:1,17:18:45.11:594,45,0	1/1:3,33:36:93.28:1262,93,0	1/1:1,17:18:39.11:525,39,0	0/0:26,0:27:69.22:0,69,1378	0/0:23,0:24:63.21:0,63,1238	0/0:16,0:16:45.15:0,45,914	1/1:0,23:23:69.23:935,69,0	1/1:2,23:25:69.19:923,69,0	1/1:4,22:26:54.17:737,54,0	1/1:0,13:13:36.12:485,36,0
chr10	54491373	.	AT	A	10327.96	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=18.618;DP=568;FS=15.520;HRun=1;HaplotypeScore=182.2040;InbreedingCoeff=0.9988;MQ=76.72;MQ0=0;MQRankSum=-15.516;QD=35.49;ReadPosRankSum=-1.186;VQSLOD=2.0221;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:99:0,99,1519	0/0:9,0:9:27.06:0,27,385	0/0:19,0:19:54.18:0,54,842	0/0:16,0:16:42.14:0,42,644	1/1:0,16:16:42.14:586,42,0	1/1:0,22:22:54.18:754,54,0	1/1:1,21:22:51.15:694,51,0	1/1:3,18:21:57.18:780,57,0	1/1:1,22:23:63.15:840,63,0	1/1:0,19:19:57.19:796,57,0	1/1:1,13:14:24.08:335,24,0	0/0:30,0:30:90.31:0,90,1437	0/0:23,0:23:66.19:0,66,994	1/1:3,31:34:87.29:1214,87,0	1/1:1,17:18:45.14:611,45,0	0/0:23,0:23:66.23:0,66,1055	0/0:26,0:26:78.24:0,78,1222	0/0:22,0:22:63.21:0,63,1007	1/1:0,14:14:42.14:582,42,0	1/1:0,9:9:21.07:293,21,0	1/1:1,15:16:27.09:377,27,0	0/0:31,0:31:93.30:0,93,1459	0/0:20,0:20:57.18:0,57,888	0/0:25,0:25:75.26:0,75,1196	1/1:3,11:14:30.10:419,30,0	1/1:1,23:24:72.24:1005,72,0	1/1:0,13:13:39.13:544,39,0	1/1:0,12:12:36.12:500,36,0
chr10	54491388	.	A	AGTCCTTT	26130.45	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=19.116;DP=550;FS=4.214;HRun=0;HaplotypeScore=202.1835;InbreedingCoeff=0.9992;MQ=77.67;MQ0=0;MQRankSum=-19.329;QD=99.36;ReadPosRankSum=-0.596;VQSLOD=5.4946;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:93.29:0,93,2433	0/0:8,0:8:24.08:0,24,608	0/0:18,0:18:51.16:0,51,1305	0/0:17,0:17:41.89:0,42,910	1/1:2,14:16:45.15:1739,45,0	1/1:2,15:17:48.16:1834,48,0	1/1:9,12:21:51.07:1572,51,0	1/1:9,10:19:47.97:1509,48,0	1/1:4,14:18:50.54:1817,51,0	1/1:6,13:19:54.18:2080,54,0	1/1:2,11:13:36.12:1374,36,0	0/0:27,0:27:81.28:0,81,2264	0/0:24,0:24:69.23:0,69,1814	1/1:4,24:29:81.28:2942,81,0	1/1:1,15:16:45.15:1786,45,0	0/0:25,0:25:72.21:0,72,1936	0/0:29,0:29:87.27:0,87,2277	0/0:24,0:24:72.21:0,72,1878	1/1:9,8:17:42.14:1452,42,0	1/1:1,9:10:30.10:1162,30,0	1/1:6,7:13:24.08:910,24,0	0/0:35,0:35:99:0,105,2899	0/0:23,0:23:69.22:0,69,1823	0/0:25,0:25:72.25:0,72,2013	1/1:1,8:9:27.09:924,27,0	1/1:4,17:21:63.08:2329,63,0	1/1:3,9:13:39.08:1371,39,0	1/1:4,8:12:36.12:1330,36,0
chr10	54491413	.	C	CT	14641.26	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=16.510;DP=637;FS=0.000;HRun=1;HaplotypeScore=196.7037;InbreedingCoeff=0.9985;MQ=79.23;MQ0=0;MQRankSum=-16.432;QD=43.19;ReadPosRankSum=-2.317;VQSLOD=3.8888;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:90.28:0,90,1241	0/0:8,0:8:24.08:0,24,336	0/0:22,0:22:62.78:0,63,790	0/0:19,0:19:51.10:0,51,650	1/1:0,33:33:87.30:1381,87,0	1/1:0,26:26:69.24:1098,69,0	1/1:1,18:19:48.16:763,48,0	1/1:3,27:30:90.31:1420,90,0	1/1:1,21:22:66.18:1025,66,0	1/1:1,26:27:81.28:1292,81,0	1/1:1,19:20:51.17:806,51,0	0/0:26,0:26:78.26:0,78,1091	0/0:21,0:21:63.18:0,63,842	1/1:1,23:24:63.21:1002,63,0	1/1:1,19:20:57.19:908,57,0	0/0:27,0:27:81.24:0,81,1096	0/0:31,0:31:90.27:0,90,1239	0/0:22,0:22:66.18:0,66,900	1/1:3,17:20:51.17:798,51,0	1/1:1,15:16:42.14:669,42,0	1/1:2,13:15:30.10:474,30,0	0/0:42,0:42:99:0,114,1559	0/0:22,0:22:66.22:0,66,922	0/0:27,0:27:81.27:0,81,1129	1/1:0,7:7:18.06:284,18,0	1/1:1,25:26:78.27:1238,78,0	1/1:2,17:19:54.18:861,54,0	1/1:1,14:15:39.13:622,39,0
chr10	54491580	.	A	AGTT	1307.38	PASS	AB=0.881;AC=18;AF=0.321;AN=56;BaseQRankSum=11.070;DP=700;FS=0.542;HRun=0;HaplotypeScore=140.2965;InbreedingCoeff=0.7321;MQ=68.44;MQ0=2;MQRankSum=-8.062;QD=5.52;ReadPosRankSum=-3.239;VQSLOD=1.7379;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:21,17:36:20.93:219,21,0	1/1:10,0:10:14.88:108,15,0	0/1:35,0:28:15.35:15,0,48	0/0:32,0:28:4.91:0,5,64	0/0:17,0:16:9.01:0,9,105	0/0:21,0:21:17.83:0,18,153	0/0:27,0:26:44.10:0,44,379	0/0:29,0:29:26.95:0,27,229	0/0:35,0:35:47.76:0,48,575	0/0:20,0:19:38.73:0,39,319	0/0:17,0:16:18.01:0,18,181	0/0:34,0:34:60:0,60,604	0/0:27,0:27:47.92:0,48,435	0/0:29,0:29:39:0,39,397	0/0:36,0:36:35.04:0,35,563	1/1:11,27:38:20.79:361,21,0	1/1:12,10:22:0.42:175,0,0	0/1:11,0:16:12:47,0,12	1/1:19,0:19:22.12:172,22,0	1/1:10,0:10:14.88:115,15,0	1/1:19,8:28:7.58:39,8,0	0/0:32,0:32:50.74:0,51,425	0/0:11,0:10:8.90:0,9,63	0/0:40,0:39:35.35:0,35,856	0/0:20,0:19:15:0,15,151	0/0:29,0:28:59.63:0,60,527	1/1:21,0:21:35.52:250,36,0	0/0:7,0:7:9:0,9,103
chr10	54491898	.	C	CT	755.98	PASS	AC=22;AF=1.000;AN=22;DP=42;FS=0.000;HRun=1;HaplotypeScore=45.9386;InbreedingCoeff=0.0509;MQ=28.31;MQ0=0;QD=18.00;VQSLOD=3.5486;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,1:1:1.25:3,1,0	1/1:0,3:3:8.99:108,9,0	./.	./.	1/1:0,6:6:7.73:38,8,0	./.	./.	./.	./.	1/1:0,2:2:6.02:77,6,0	1/1:0,3:3:8.98:104,9,0	./.	./.	./.	./.	./.	./.	./.	./.	1/1:0,6:6:9.96:116,10,0	./.	1/1:0,5:5:3.95:46,4,0	1/1:0,5:5:4.36:21,4,0	./.	1/1:0,3:3:3.01:44,3,0	1/1:0,7:7:17.65:227,18,0	./.	1/1:0,1:1:3.01:44,3,0
chr10	54491906	.	TCA	T	1038.71	PASS	AC=22;AF=1.000;AN=22;DP=42;FS=0.000;HRun=0;HaplotypeScore=44.6249;InbreedingCoeff=0.1226;MQ=28.31;MQ0=0;QD=24.73;VQSLOD=3.9830;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,1:1:1.55:4,2,0	1/1:0,3:3:9.03:127,9,0	./.	./.	1/1:0,6:6:17.37:98,17,0	./.	./.	./.	./.	1/1:0,2:2:6.02:85,6,0	1/1:0,3:3:8.92:111,9,0	./.	./.	./.	./.	./.	./.	./.	./.	1/1:0,6:6:14.81:170,15,0	./.	1/1:0,5:5:11.70:92,12,0	1/1:0,5:5:12.49:67,12,0	./.	1/1:0,3:3:3.90:51,4,0	1/1:0,7:7:17.98:258,18,0	./.	1/1:0,1:1:3.01:48,3,0
chr10	54492752	.	A	AACAC	986.86	PASS	AB=0.767;AC=26;AF=0.619;AN=42;BaseQRankSum=4.583;DP=451;FS=0.824;HRun=0;HaplotypeScore=117.4028;InbreedingCoeff=0.3268;MQ=56.48;MQ0=9;MQRankSum=-0.924;QD=3.84;ReadPosRankSum=-1.279;VQSLOD=2.0499;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:31:55.10:140,0,55	1/1:5,0:5:6:58,6,0	./.	0/0:40,0:24:3:0,3,33	1/1:9,0:9:0.47:1,0,0	./.	1/1:29,0:29:12.03:182,12,0	1/1:26,0:26:11.94:116,12,0	1/1:7,2:15:6.02:101,6,0	1/1:10,0:10:5.97:46,6,0	1/1:4,0:4:3.01:38,3,0	0/0:15,0:16:5.15:0,5,334	0/0:11,0:11:9:0,9,115	./.	./.	0/1:13,0:19:37.88:38,0,164	0/1:11,0:25:55.94:56,0,67	0/1:13,0:15:48.58:49,0,55	1/1:18,0:17:5.93:40,6,0	./.	1/1:13,0:12:6.01:96,6,0	0/0:9,0:9:9.03:0,9,141	0/0:14,0:16:15.03:0,15,193	0/0:28,0:31:39.05:0,39,559	./.	1/1:18,0:17:5.98:46,6,0	1/1:16,0:18:9.02:129,9,0	./.
chr10	54493052	.	TG	T	4693.92	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=16.291;DP=494;FS=10.934;HRun=7;HaplotypeScore=122.2608;InbreedingCoeff=0.9729;MQ=86.99;MQ0=0;MQRankSum=-13.891;QD=21.05;ReadPosRankSum=-0.525;VQSLOD=3.2784;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,99,1245	0/0:6,0:6:18.06:0,18,226	0/0:24,0:24:57.14:0,57,664	0/0:19,0:19:41.81:0,42,461	1/1:3,15:18:21.04:213,21,0	1/1:1,7:8:18.04:183,18,0	1/1:5,12:17:24.04:243,24,0	1/1:2,14:16:45.09:454,45,0	1/1:1,11:12:24.05:244,24,0	1/1:2,13:15:33.08:336,33,0	1/1:0,9:9:24.05:244,24,0	0/0:21,0:21:60.18:0,60,741	0/0:14,0:14:39.12:0,39,488	1/1:1,16:17:39.08:397,39,0	1/1:3,22:25:54.11:549,54,0	0/0:18,0:18:48.15:0,48,604	0/0:31,0:31:87.28:0,87,1094	0/0:21,0:21:57.18:0,57,717	1/1:2,11:13:27.06:275,27,0	1/1:3,6:9:15.03:152,15,0	1/1:2,7:9:12.02:121,12,0	0/0:33,0:33:93.29:0,93,1156	0/0:25,0:25:63.18:0,63,767	0/0:24,0:24:65.69:0,66,790	1/1:1,5:6:15.03:152,15,0	1/1:2,22:24:54.12:550,54,0	1/1:1,22:23:51.11:519,51,0	1/1:0,2:2:6.01:61,6,0
chr10	54493108	.	A	AT	9968.46	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=17.554;DP=542;FS=1.051;HRun=0;HaplotypeScore=115.6868;InbreedingCoeff=0.9953;MQ=87.29;MQ0=0;MQRankSum=-13.241;QD=37.76;ReadPosRankSum=-0.883;VQSLOD=4.1877;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,135,1828	0/0:9,0:9:24.08:0,24,335	0/0:22,0:22:63.18:0,63,834	0/0:24,0:24:72.21:0,72,952	1/1:1,15:16:33.11:523,33,0	1/1:0,17:17:39.13:622,39,0	1/1:0,15:15:27.01:398,27,0	1/1:0,21:21:57.18:878,57,0	1/1:0,20:20:51.17:811,51,0	1/1:0,13:13:33.11:526,33,0	1/1:0,11:11:27.09:425,27,0	0/0:19,0:19:57.18:0,57,778	0/0:21,0:21:63.17:0,63,840	1/1:0,17:17:51.17:808,51,0	1/1:1,26:27:24.20:930,24,0	0/0:7,0:7:21.07:0,21,294	0/0:39,0:39:99:0,112,1496	0/0:13,0:13:39.01:0,39,465	1/1:0,10:10:24.08:363,24,0	1/1:0,8:8:15.05:238,15,0	1/1:0,14:14:33.11:513,33,0	0/0:29,0:29:87.29:0,87,1215	0/0:17,0:17:51.17:0,51,711	0/0:32,0:32:96.28:0,96,1290	1/1:0,11:11:30.10:455,30,0	1/1:1,29:30:75.26:1190,75,0	1/1:1,26:27:63.21:983,63,0	1/1:0,7:7:21:304,21,0
chr10	54493496	.	A	ACACT	15680.43	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=9.247;DP=615;FS=0.678;HRun=0;HaplotypeScore=110.0820;InbreedingCoeff=0.9913;MQ=98.11;MQ0=1;MQRankSum=-15.638;QD=51.24;ReadPosRankSum=-1.275;VQSLOD=5.5588;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,135,2397	0/0:7,0:7:12.04:0,12,221	0/0:38,0:38:99:0,105,1722	0/0:39,0:39:96.28:0,96,1653	1/1:0,14:14:24.08:576,24,0	1/1:0,13:13:30.10:787,30,0	1/1:2,15:18:45.15:1174,45,0	1/1:5,21:32:66.20:1540,66,0	1/1:1,16:18:39.13:1026,39,0	1/1:10,9:18:36.01:715,36,0	1/1:1,8:10:15.05:382,15,0	0/0:26,0:26:72.22:0,72,1260	0/0:26,0:26:75.24:0,75,1347	1/1:1,21:23:42.14:1095,42,0	1/1:3,32:39:78.27:2049,78,0	0/0:21,0:21:62.80:0,63,1114	0/0:19,0:19:54.13:0,54,912	0/0:20,0:20:54.16:0,54,929	1/1:2,14:20:48.15:1150,48,0	1/1:7,15:21:45.15:1155,45,0	1/1:2,14:17:30.10:781,30,0	0/0:21,0:21:57.16:0,57,986	0/0:17,0:17:45.13:0,45,760	0/0:25,0:25:75.24:0,75,1341	1/1:2,9:11:21.07:543,21,0	1/1:5,13:17:42.09:974,42,0	1/1:4,19:23:51.13:1262,51,0	1/1:0,7:8:18.06:471,18,0
chr10	54493610	.	CT	C	8989.90	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=19.642;DP=644;FS=5.155;HRun=2;HaplotypeScore=148.4796;InbreedingCoeff=0.9953;MQ=92.17;MQ0=0;MQRankSum=-17.579;QD=28.81;ReadPosRankSum=0.248;VQSLOD=4.2879;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:52:99:0,143,2302	0/0:14,0:14:42.14:0,42,625	0/0:32,0:32:96.27:0,96,1370	0/0:34,0:34:99:0,99,1354	1/1:0,25:25:42.14:539,42,0	1/1:0,12:12:27.09:346,27,0	1/1:2,13:15:30.10:389,30,0	1/1:2,24:26:69.21:873,69,0	1/1:0,15:15:33.11:428,33,0	1/1:1,23:23:63.18:794,63,0	1/1:0,25:25:54.18:699,54,0	0/0:16,0:16:48.15:0,48,700	0/0:20,0:20:60.20:0,60,898	1/1:1,17:18:39.13:502,39,0	1/1:2,26:28:63.20:812,63,0	0/0:22,0:22:66.22:0,66,988	0/0:37,0:37:99:0,108,1615	0/0:15,0:15:45.15:0,45,674	1/1:1,14:15:33.11:425,33,0	1/1:0,30:30:66.21:855,66,0	1/1:0,11:11:15.05:194,15,0	0/0:30,0:30:90.30:0,90,1349	0/0:27,0:27:78.26:0,78,1167	0/0:32,0:31:93.31:0,93,1392	1/1:0,23:23:60.19:773,60,0	1/1:1,18:18:51.17:661,51,0	1/1:1,16:17:39.13:505,39,0	1/1:1,8:9:15.05:194,15,0
chr10	54493825	.	A	ATCGG	16417.64	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=3.517;DP=582;FS=20.544;HRun=0;HaplotypeScore=102.6024;InbreedingCoeff=0.9921;MQ=68.26;MQ0=0;MQRankSum=-10.333;QD=49.90;ReadPosRankSum=-1.903;VQSLOD=3.7488;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:87.19:0,87,1515	0/0:12,0:12:33.11:0,33,640	0/0:28,0:27:75.21:0,75,1257	0/0:21,0:21:48.42:0,48,732	1/1:8,6:14:32.30:506,32,0	1/1:2,14:17:36.08:934,36,0	1/1:0,8:8:14.98:347,15,0	1/1:5,20:33:86.52:1413,87,0	1/1:3,13:18:39.05:950,39,0	1/1:16,15:31:83.80:1668,84,0	1/1:7,13:19:39:873,39,0	0/0:12,0:12:36.10:0,36,648	0/0:23,0:23:69.21:0,69,1297	1/1:0,16:17:30.10:780,30,0	1/1:0,16:18:36.11:969,36,0	0/0:19,0:19:57.18:0,57,1092	0/0:19,0:19:57.20:0,57,1122	0/0:28,0:28:84.16:0,84,1452	1/1:15,12:27:74.79:1469,75,0	1/1:12,23:35:81.21:2057,81,0	1/1:1,9:11:18.06:480,18,0	0/0:19,0:19:57.15:0,57,958	0/0:19,0:19:57.12:0,57,961	0/0:23,0:23:69.18:0,69,1210	1/1:1,16:20:33.11:864,33,0	1/1:1,21:24:71.85:1617,72,0	1/1:1,20:25:45.15:1221,45,0	1/1:2,7:11:12:271,12,0
chr10	54494210	.	A	AT	3748.98	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=5.128;DP=640;FS=0.810;HRun=7;HaplotypeScore=137.8142;InbreedingCoeff=0.9888;MQ=75.81;MQ0=0;MQRankSum=0.892;QD=31.77;ReadPosRankSum=-1.015;VQSLOD=1.3256;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:75.07:0,75,716	0/0:19,0:19:54.08:0,54,521	0/0:14,0:14:28.83:0,29,258	0/0:15,0:15:35.97:0,36,329	0/0:28,0:28:69.10:0,69,666	0/0:31,0:31:81.13:0,81,782	0/0:14,0:14:36.05:0,36,348	0/0:33,0:33:75.10:0,75,724	0/0:18,0:18:48.08:0,48,464	0/0:28,0:28:72.11:0,72,695	0/0:20,1:21:17.89:0,18,456	0/0:16,0:16:45.05:0,45,424	0/0:22,0:22:60.09:0,60,579	0/0:20,0:20:57.09:0,57,550	0/0:31,0:31:90.13:0,90,863	0/0:20,0:20:57.09:0,57,551	0/0:17,0:17:33.04:0,33,319	0/0:5,0:5:12.02:0,12,116	1/1:3,23:26:72.18:828,72,0	1/1:5,27:33:81.11:957,81,0	1/1:1,16:17:51.11:600,51,0	0/0:21,0:21:63.09:0,63,603	0/0:23,0:23:63.10:0,63,608	0/0:26,0:26:72.10:0,72,690	0/0:19,0:19:45.06:0,45,430	0/0:34,0:34:87.13:0,87,840	1/1:5,37:42:99:1365,114,0	0/0:17,0:17:39.06:0,39,377
chr10	54495219	.	GACCAATAC	G	23195.80	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=20.446;DP=720;FS=2.869;HRun=0;HaplotypeScore=214.4692;InbreedingCoeff=0.9558;MQ=83.46;MQ0=0;MQRankSum=-20.319;QD=64.61;ReadPosRankSum=-0.995;VQSLOD=4.7462;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:67,0:67:99:0,196,8536	0/0:7,0:7:21.07:0,21,701	0/0:25,0:25:57.19:0,57,2200	0/0:31,0:31:81.25:0,81,2974	1/1:3,20:23:42.14:1193,42,0	1/1:3,13:16:39.13:1114,39,0	1/1:2,24:26:66.23:1888,66,0	1/1:7,15:22:45.12:1226,45,0	1/1:0,20:20:51.18:1461,51,0	1/1:1,25:26:72.23:1968,72,0	1/1:1,14:15:33.11:933,33,0	0/0:36,0:36:99:0,108,4724	0/0:27,0:27:81.25:0,81,3412	1/1:2,21:23:54.19:1546,54,0	1/1:4,42:46:99:3181,111,0	0/0:30,1:31:4.44:0,4,3659	0/0:33,0:33:96.33:0,96,4136	0/0:29,0:29:84.29:0,84,3708	1/1:3,16:19:39.13:1084,39,0	1/1:2,20:22:51.18:1430,51,0	1/1:4,15:19:33.11:928,33,0	0/0:23,0:23:66.23:0,66,2863	0/0:22,0:22:66.23:0,66,2813	0/0:30,0:30:84.29:0,84,3742	1/1:3,19:22:48.16:1369,48,0	1/1:2,24:26:66.22:1818,66,0	1/1:3,26:29:69.24:1971,69,0	1/1:1,4:5:3.01:84,3,0
chr10	54495533	.	AG	A	2366.40	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=15.780;DP=606;FS=4.884;HRun=3;HaplotypeScore=161.6666;InbreedingCoeff=0.9278;MQ=88.50;MQ0=0;MQRankSum=-0.077;QD=6.96;ReadPosRankSum=1.645;VQSLOD=0.8030;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,117,1812	0/0:6,0:6:18.06:0,18,285	0/0:28,0:28:84.29:0,84,1331	0/0:21,0:21:63.19:0,63,962	1/1:17,0:17:0.47:69,0,0	1/1:20,0:20:15.76:162,16,0	1/1:26,2:28:37:272,37,0	1/1:26,1:27:14.72:127,15,0	1/1:18,0:18:28.73:169,29,0	1/1:25,0:25:21.21:179,21,0	1/1:23,0:23:22.04:163,22,0	0/0:29,0:29:87.30:0,87,1388	0/0:21,0:21:63.21:0,63,1003	1/1:17,0:17:34.56:203,35,0	1/1:21,0:21:6.92:170,7,0	0/0:29,0:29:87.28:0,87,1366	0/0:26,0:26:78.22:0,78,1193	0/0:8,0:8:24.08:0,24,384	1/1:22,3:25:17.09:160,17,0	1/1:22,0:22:7.20:170,7,0	1/1:26,1:27:22.86:185,23,0	0/0:19,0:19:57.19:0,57,910	0/0:21,0:21:63.21:0,63,1004	0/0:19,0:19:57.19:0,57,911	1/1:24,0:24:50.83:243,51,0	1/1:14,1:15:17.34:126,17,0	1/1:22,0:22:21.95:100,22,0	1/1:8,1:9:12.34:91,12,0
chr10	54495831	.	T	TACAC	2958.26	PASS	AB=1.000;AC=17;AF=0.315;AN=54;BaseQRankSum=2.799;DP=633;FS=0.000;HRun=0;HaplotypeScore=184.1890;InbreedingCoeff=0.7266;MQ=66.07;MQ0=6;MQRankSum=-4.605;QD=12.48;ReadPosRankSum=-3.264;VQSLOD=2.7528;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:32,0:31:18.03:260,18,0	./.	0/0:37,0:28:6.60:0,7,138	0/0:33,0:25:5.69:0,6,56	0/0:24,0:23:26.01:0,26,256	0/1:27,0:27:39.96:40,0,425	0/0:28,0:28:22.18:0,22,301	0/0:26,0:26:14.82:0,15,152	0/0:15,0:15:21.06:0,21,251	0/0:23,0:23:25.82:0,26,263	0/0:15,0:15:27.55:0,28,338	0/0:23,0:23:45.51:0,46,665	0/0:17,0:17:36.09:0,36,529	0/0:18,0:18:12.09:0,12,349	0/0:24,0:24:51.09:0,51,579	1/1:18,0:17:9.01:129,9,0	0/1:17,0:16:2.10:258,0,2	1/1:15,0:14:12.04:193,12,0	1/1:17,0:13:27:407,27,0	1/1:33,0:32:38.85:708,39,0	1/1:23,11:37:20.89:318,21,0	0/0:14,0:16:27.07:0,27,371	0/0:18,0:18:30.54:0,31,430	0/0:20,0:21:26.38:0,26,499	0/0:30,0:30:41.95:0,42,464	0/0:20,0:20:17.72:0,18,214	1/1:28,0:28:50.90:829,51,0	0/1:13,0:13:9.83:10,0,320
chr10	54495862	.	C	CACA	1060.67	PASS	AB=0.880;AC=7;AF=0.125;AN=56;BaseQRankSum=4.032;DP=631;FS=13.341;HRun=0;HaplotypeScore=151.8015;InbreedingCoeff=-0.1587;MQ=65.39;MQ0=4;MQRankSum=-2.231;QD=6.10;ReadPosRankSum=-2.862;VQSLOD=1.2069;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:43.17:0,43,758	0/0:6,0:6:14.94:0,15,173	0/0:25,0:18:42.15:0,42,727	0/0:28,0:21:56.16:0,56,760	0/0:25,0:25:40.91:0,41,291	0/0:33,0:33:33.21:0,33,506	0/0:24,0:24:33.33:0,33,356	0/1:33,0:33:25.34:25,0,268	0/1:17,0:17:5.76:6,0,230	0/0:19,0:19:9.89:0,10,262	0/0:22,0:22:0.12:0,0,290	0/0:24,0:24:66.21:0,66,1192	0/0:26,0:26:75.22:0,75,1286	0/1:24,0:24:6.08:6,0,348	0/0:30,0:30:42.92:0,43,506	0/0:18,0:17:47.87:0,48,609	0/0:14,0:14:8.27:0,8,433	0/0:9,0:8:0.95:0,1,196	0/1:16,2:18:71.71:184,0,72	0/1:17,5:23:36.84:366,0,37	0/1:24,2:30:81.39:163,0,81	0/0:22,0:22:63.22:0,63,1138	0/0:19,0:19:54.08:0,54,958	0/0:20,0:20:60.09:0,60,961	0/0:24,0:24:64.34:0,64,455	0/0:21,0:21:59.13:0,59,351	0/1:16,8:26:19.99:433,0,20	0/0:15,0:15:32.49:0,32,265
chr10	54496155	.	A	AT	8945.29	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=9.613;DP=661;FS=0.619;HRun=7;HaplotypeScore=116.8842;InbreedingCoeff=0.9993;MQ=72.12;MQ0=0;MQRankSum=-14.058;QD=30.22;ReadPosRankSum=-2.435;VQSLOD=2.6500;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:60.09:0,60,579	0/0:8,0:8:24.04:0,24,232	0/0:18,0:18:32.07:0,32,262	0/0:11,0:11:30.03:0,30,277	1/1:8,22:30:63.19:756,63,0	1/1:4,18:22:34.21:695,34,0	1/1:5,16:21:54.12:635,54,0	1/1:11,19:30:63.19:758,63,0	1/1:2,20:22:60.18:723,60,0	1/1:5,22:27:60.34:810,60,0	1/1:3,21:24:63.19:760,63,0	0/0:31,0:31:87.13:0,87,840	0/0:18,0:18:48.08:0,48,463	1/1:3,16:19:51.16:616,51,0	1/1:10,21:31:81.22:946,81,0	0/0:22,0:22:66.11:0,66,637	0/0:31,0:31:90.12:0,90,862	0/0:11,0:11:24.03:0,24,231	0/0:28,0:28:78.10:0,78,746	0/0:41,0:41:99:0,114,1089	0/0:17,0:17:48.08:0,48,463	0/0:32,0:32:96.15:0,96,927	0/0:21,0:21:54.08:0,54,521	0/0:21,0:21:57.08:0,57,550	1/1:6,22:28:72.21:860,72,0	1/1:3,26:29:78.23:932,78,0	0/0:33,0:33:84.09:0,84,798	1/1:0,13:13:39.08:454,39,0
chr10	54496172	.	TCA	T	15380.06	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=17.021;DP=656;FS=6.136;HRun=0;HaplotypeScore=113.0227;InbreedingCoeff=0.9994;MQ=80.43;MQ0=0;MQRankSum=-11.149;QD=38.84;ReadPosRankSum=-0.174;VQSLOD=6.5388;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:69.24:0,69,1292	0/0:8,0:8:24.08:0,24,448	0/0:23,0:23:69.20:0,69,1183	0/0:19,0:19:44.99:0,45,891	1/1:4,22:27:57.19:836,57,0	1/1:0,18:18:54.18:793,54,0	1/1:2,21:23:60.20:880,60,0	1/1:2,23:25:69.19:944,69,0	1/1:1,15:16:45.15:660,45,0	1/1:1,25:26:75.25:1100,75,0	1/1:3,20:23:54.18:783,54,0	0/0:29,0:29:81.28:0,81,1516	0/0:16,0:16:48.16:0,48,898	1/1:3,15:18:45.15:659,45,0	1/1:2,28:30:84.28:1233,84,0	0/0:24,1:25:28.07:0,28,1234	0/0:33,0:33:96.30:0,96,1763	0/0:10,0:10:27.08:0,27,474	1/1:2,21:23:53.40:891,53,0	1/1:2,37:39:99:1501,102,0	1/1:0,22:22:54.18:795,54,0	0/0:33,0:33:96.29:0,96,1716	0/0:20,0:20:57.18:0,57,1036	0/0:21,0:21:63.22:0,63,1160	1/1:0,28:28:78.23:1105,78,0	1/1:2,30:32:90.29:1303,90,0	1/1:0,33:33:93.31:1369,93,0	1/1:1,12:13:36.12:529,36,0
chr10	54497303	.	GCCTGGCTCCCTCTGCCCCTGCCCTACT	G	1909.69	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=2.945;DP=551;FS=13.093;HRun=0;HaplotypeScore=341.8019;InbreedingCoeff=0.8363;MQ=73.15;MQ0=0;MQRankSum=-3.896;QD=26.52;ReadPosRankSum=-0.320;VQSLOD=0.9224;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:14:15.05:541,15,0	1/1:3,3:6:3.01:210,3,0	0/0:14,0:14:5.31:0,5,599	0/0:11,0:11:6.07:0,6,470	0/0:11,0:11:27.09:0,27,1974	0/0:28,0:28:48.16:0,48,3251	0/0:36,0:36:75.26:0,75,4887	0/0:20,0:20:15.05:0,15,587	0/0:28,0:28:66.23:0,66,5332	0/0:16,0:16:33.11:0,33,2670	0/0:8,0:8:15.05:0,15,893	0/0:29,0:29:63.22:0,63,5995	0/0:8,0:8:21.07:0,21,1844	0/0:24,0:24:39.13:0,39,3270	0/0:15,0:15:21.07:0,21,1394	1/1:8,5:13:6.02:314,6,0	1/1:8,18:26:6.02:420,6,0	1/1:13,0:13:18.06:578,18,0	0/0:23,0:23:42.10:0,42,2477	0/0:12,0:12:24.08:0,24,1646	0/0:60,0:60:99:0,102,5992	0/0:19,0:19:30.10:0,30,2731	0/0:10,0:10:15.05:0,15,567	0/0:33,0:33:69.24:0,69,5930	0/0:17,0:17:33.11:0,33,2572	0/0:25,0:25:54.16:0,54,3435	0/0:18,0:18:41.37:0,41,3066	0/0:14,0:13:39.13:0,39,1889
chr10	54497341	.	T	TC	50.25	PASS	AB=0.876;AC=3;AF=0.054;AN=56;BaseQRankSum=4.780;DP=482;FS=3.239;HRun=3;HaplotypeScore=91.6645;InbreedingCoeff=-0.0719;MQ=65.22;MQ0=1;MQRankSum=-3.561;QD=1.26;ReadPosRankSum=-0.225;VQSLOD=-0.7521;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:13,6:19:69.92:70,0,332	0/0:5,0:5:3.08:0,3,73	0/0:12,0:10:28.64:0,29,355	0/0:9,0:9:19.76:0,20,246	0/0:8,0:8:15.05:0,15,195	0/0:22,0:22:48.16:0,48,623	0/0:34,0:34:60.17:0,60,763	0/0:15,0:15:45.12:0,45,568	0/0:26,0:26:75.24:0,75,973	0/0:18,0:18:54.18:0,54,700	0/0:5,0:5:12.04:0,12,156	0/0:32,0:32:96.28:0,96,1200	0/0:17,0:17:51.17:0,51,660	0/0:24,0:24:57.10:0,57,714	0/0:18,0:18:39.10:0,39,478	0/1:8,0:8:20.06:20,0,122	0/0:23,0:23:20.04:0,20,212	0/1:11,2:13:59.41:59,0,278	0/0:24,0:24:69.21:0,69,878	0/0:7,0:7:21.07:0,21,273	0/0:43,0:43:59.93:0,60,794	0/0:12,0:12:30.10:0,30,386	0/0:2,0:2:6.02:0,6,78	0/0:34,0:34:96:0,96,1213	0/0:11,0:11:24.08:0,24,303	0/0:22,0:22:66.20:0,66,831	0/0:14,0:14:36.09:0,36,459	0/0:5,0:5:9.03:0,9,117
chr10	54497368	.	TCCTGCC	T	9356.39	PASS	AC=30;AF=0.556;AN=54;BaseQRankSum=9.106;DP=499;FS=11.398;HRun=0;HaplotypeScore=121.7158;InbreedingCoeff=0.9233;MQ=64.72;MQ0=0;MQRankSum=-12.019;QD=34.15;ReadPosRankSum=1.013;VQSLOD=4.2339;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:66.65:0,67,2065	0/0:5,0:5:12.03:0,12,330	0/0:15,0:15:42.12:0,42,1106	0/0:6,0:6:12.04:0,12,341	1/1:4,8:12:0.47:1,0,0	1/1:4,16:20:30.10:647,30,0	1/1:10,23:33:39.13:824,39,0	1/1:8,12:20:36.10:708,36,0	1/1:5,20:25:53.93:1184,54,0	1/1:5,12:17:36.12:789,36,0	./.	0/0:30,0:30:72.25:0,72,2276	0/0:20,0:20:57.20:0,57,1919	1/1:6,22:28:54.18:1184,54,0	1/1:0,20:20:42.14:921,42,0	0/0:18,0:18:44.64:0,45,1407	0/0:26,0:26:42.14:0,42,1322	0/0:17,0:17:39.13:0,39,1308	1/1:5,9:14:27.09:576,27,0	1/1:1,7:8:18.06:373,18,0	1/1:12,18:30:8.86:198,9,0	0/0:17,0:17:39.13:0,39,1196	0/0:5,0:5:9.03:0,9,302	0/0:36,0:36:90.31:0,90,2970	1/1:3,14:17:24.04:470,24,0	1/1:3,15:18:42.14:890,42,0	1/1:2,9:11:24.55:528,25,0	1/1:0,1:1:3.01:66,3,0
chr10	54497989	.	TA	T	2273.66	PASS	AC=38;AF=1.000;AN=38;DP=306;FS=0.000;HRun=6;HaplotypeScore=32.5088;InbreedingCoeff=-0.0934;MQ=16.74;MQ0=196;QD=9.43;VQSLOD=-0.4961;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,2:2:3.01:32,3,0	1/1:2,5:5:3.01:32,3,0	./.	./.	1/1:8,12:13:30.08:321,30,0	1/1:3,2:2:6.02:64,6,0	1/1:4,3:3:6.01:64,6,0	./.	./.	1/1:17,13:17:36.09:386,36,0	1/1:14,10:11:24.06:257,24,0	1/1:2,1:1:3.01:32,3,0	1/1:11,1:2:3.01:32,3,0	./.	./.	1/1:6,3:1:3.01:32,3,0	./.	1/1:3,1:1:3.01:32,3,0	./.	1/1:11,7:8:21.05:225,21,0	./.	1/1:4,9:9:6.02:64,6,0	1/1:7,7:8:12.03:129,12,0	1/1:7,1:1:3.01:32,3,0	1/1:3,5:5:12.03:129,12,0	1/1:6,8:8:24.06:258,24,0	1/1:18,5:5:15.04:161,15,0	1/1:8,2:2:6.02:64,6,0
chr10	54500177	.	TATAAATTA	T	417.22	PASS	AB=0.522;AC=7;AF=0.159;AN=44;BaseQRankSum=-1.783;DP=100;FS=0.000;HRun=0;HaplotypeScore=32.3890;InbreedingCoeff=0.3560;MQ=35.78;MQ0=6;MQRankSum=-1.289;QD=13.46;ReadPosRankSum=2.019;VQSLOD=0.8756;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:7,0:7:20.80:198,21,0	./.	0/0:6,0:1:3.01:0,3,33	0/0:6,0:1:2.37:0,2,8	0/0:3,0:2:3.01:0,3,76	0/0:1,0:1:3.01:0,3,75	0/0:1,0:1:3.01:0,3,38	0/0:12,0:9:23.76:0,24,164	0/0:2,0:2:6.02:0,6,151	0/0:1,0:1:2.96:0,3,19	./.	0/0:5,0:4:9.01:0,9,187	0/0:3,0:3:8.96:0,9,176	0/0:1,0:1:3.01:0,3,39	0/0:2,0:1:3.01:0,3,76	1/1:1,1:2:3.01:86,3,0	0/1:1,10:12:1.38:163,0,1	1/1:2,8:9:3.01:86,3,0	0/0:4,0:4:12.01:0,12,172	./.	./.	0/0:2,0:2:2.98:0,3,21	0/0:3,0:3:9.02:0,9,233	0/0:6,0:6:17.92:0,18,246	./.	0/0:1,0:1:2.99:0,3,24	./.	0/0:6,0:6:9.03:0,9,229
chr10	54500211	.	TTAA	T	1606.85	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=7.085;DP=126;FS=48.275;HRun=0;HaplotypeScore=35.9357;InbreedingCoeff=0.6873;MQ=62.61;MQ0=1;MQRankSum=-4.009;QD=22.32;ReadPosRankSum=-0.844;VQSLOD=1.2653;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:8:24.08:0,24,333	0/0:3,0:3:9.03:0,9,125	0/0:1,0:1:0.47:0,0,1	0/0:3,0:3:3.01:0,3,41	1/1:6,0:6:11.25:123,11,0	1/1:6,0:6:8.39:94,8,0	1/1:3,1:4:6.02:94,6,0	1/1:9,0:8:24.08:324,24,0	1/1:4,0:4:10.76:102,11,0	1/1:3,0:3:9.03:120,9,0	1/1:6,0:6:6.02:85,6,0	0/0:4,0:4:9.03:0,9,157	0/0:5,0:5:15.05:0,15,241	1/1:4,0:4:9.03:126,9,0	1/1:5,0:5:5.23:50,5,0	0/0:2,0:2:4.56:0,5,45	0/0:12,0:12:26.88:0,27,339	0/0:7,0:7:10.85:0,11,130	1/1:1,4:5:14.47:148,14,0	1/1:3,0:3:3.01:43,3,0	1/1:1,0:1:3.01:43,3,0	0/0:3,0:3:9.03:0,9,126	0/0:5,0:5:15.05:0,15,241	0/0:1,0:1:3.01:0,3,74	1/1:2,0:2:3.01:43,3,0	1/1:5,0:4:12.04:172,12,0	1/1:2,0:2:3.01:43,3,0	1/1:7,0:7:19:188,19,0
chr10	54500214	.	A	AAT	2021.92	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=6.752;DP=149;FS=56.714;HRun=0;HaplotypeScore=38.9840;InbreedingCoeff=0.7416;MQ=64.59;MQ0=1;MQRankSum=-3.038;QD=21.74;ReadPosRankSum=-2.298;VQSLOD=1.3359;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:8:24.08:0,24,366	0/0:3,0:3:9.03:0,9,137	0/0:2,0:2:2.60:0,3,10	0/0:3,0:3:3.01:0,3,46	1/1:0,4:6:12.02:127,12,0	1/1:1,5:7:12.03:135,12,0	1/1:3,3:6:9:111,9,0	1/1:4,8:12:30.08:412,30,0	1/1:0,3:5:12.02:120,12,0	1/1:0,0:5:15.03:189,15,0	1/1:1,6:8:9.03:113,9,0	0/0:4,0:4:9.03:0,9,138	0/0:6,0:6:15.05:0,15,229	1/1:1,0:5:9.02:105,9,0	1/1:1,4:6:9.02:103,9,0	0/0:2,0:2:6.02:0,6,84	0/0:12,0:12:30.10:0,30,432	0/0:6,0:6:12.04:0,12,176	1/1:6,0:7:15.01:177,15,0	1/1:1,2:4:6.02:70,6,0	1/1:0,0:1:3.01:37,3,0	0/0:3,0:3:9.03:0,9,134	0/0:6,0:6:18.05:0,18,256	0/0:1,0:1:3.01:0,3,46	1/1:0,3:3:3.01:37,3,0	1/1:2,6:7:18.03:217,18,0	1/1:0,2:2:3.01:40,3,0	1/1:0,0:7:21.04:227,21,0
chr10	54500447	.	TTTCC	T	5350.34	PASS	AB=0.783;AC=39;AF=0.750;AN=52;BaseQRankSum=8.815;DP=469;FS=0.000;HRun=0;HaplotypeScore=116.7678;InbreedingCoeff=0.7390;MQ=64.30;MQ0=4;MQRankSum=-6.480;QD=17.09;ReadPosRankSum=0.285;VQSLOD=4.2690;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:15,5:20:24.07:340,24,0	1/1:3,6:9:11.93:187,12,0	0/0:19,0:13:0:0,0,0	./.	1/1:14,0:14:18.06:274,18,0	1/1:28,0:28:30.10:469,30,0	1/1:14,0:14:5.55:135,6,0	./.	1/1:22,0:22:27.09:414,27,0	1/1:21,0:21:27.08:401,27,0	1/1:4,0:4:3.01:47,3,0	0/0:17,0:17:21.07:0,21,442	0/0:22,0:22:45.15:0,45,961	1/1:20,0:20:14.19:232,14,0	1/1:21,0:21:27.09:422,27,0	1/1:5,5:10:18.05:259,18,0	0/1:13,5:18:8.55:211,0,9	1/1:3,2:5:9.03:133,9,0	1/1:12,0:12:12.04:188,12,0	1/1:10,0:10:9.01:114,9,0	1/1:15,0:14:3.01:42,3,0	0/0:14,0:14:21.07:0,21,462	0/0:13,0:13:24.08:0,24,521	0/0:19,0:19:39.13:0,39,847	1/1:11,0:11:18.06:278,18,0	1/1:23,0:23:33.11:512,33,0	1/1:16,0:16:27.09:422,27,0	1/1:20,0:20:18.06:271,18,0
chr10	54500464	.	TTC	T	1118.02	PASS	AB=0.760;AC=18;AF=0.321;AN=56;BaseQRankSum=13.980;DP=402;FS=2.652;HRun=0;HaplotypeScore=98.7491;InbreedingCoeff=-0.2988;MQ=47.55;MQ0=13;MQRankSum=-7.366;QD=5.11;ReadPosRankSum=10.843;VQSLOD=1.1692;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:15,0:15:6.30:6,0,195	0/1:7,0:7:3.02:3,0,37	0/0:14,0:4:11.99:0,12,151	0/0:14,0:5:15.05:0,15,220	0/1:6,5:11:72.93:83,0,73	0/1:14,8:22:99:136,0,199	0/1:14,4:15:22.85:23,0,227	0/0:24,0:21:58.38:0,58,418	0/1:9,8:17:99:118,0,137	0/1:9,7:16:99:143,0,113	0/1:2,1:3:9.12:9,0,35	0/0:21,0:20:60.20:0,60,999	0/0:24,0:23:69.24:0,69,1265	0/1:8,6:14:46.18:46,0,188	0/1:7,7:14:51:147,0,51	0/0:10,0:10:4.68:0,5,139	0/0:14,0:14:16.40:0,16,248	0/1:5,0:5:0.67:1,0,41	0/1:6,4:9:63.04:63,0,99	0/1:6,3:9:11.89:12,0,96	0/0:10,1:10:0.13:0,0,110	0/0:15,0:15:45.14:0,45,751	0/0:15,0:15:42.13:0,42,732	0/0:21,0:21:57.19:0,57,1074	1/1:4,3:7:17.81:128,18,0	0/1:7,12:19:83.69:166,0,84	0/1:7,8:15:73.22:124,0,73	0/1:9,7:16:64.86:65,0,237
chr10	54500552	.	CTCCT	C	11170.19	PASS	AB=0.720;AC=41;AF=0.732;AN=56;BaseQRankSum=12.232;DP=552;FS=1.763;HRun=0;HaplotypeScore=105.6482;InbreedingCoeff=0.7437;MQ=59.91;MQ0=5;MQRankSum=-4.326;QD=27.93;ReadPosRankSum=3.321;VQSLOD=4.9812;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,28:30:63.06:1014,63,0	0/1:2,5:7:3.93:239,0,4	0/1:21,0:17:28.16:28,0,583	0/0:25,0:22:36.11:0,36,775	1/1:2,19:21:51.17:873,51,0	1/1:4,24:28:42.14:718,42,0	1/1:3,13:16:24.08:411,24,0	1/1:9,19:27:57.15:868,57,0	0/1:7,11:18:10.35:239,0,10	1/1:3,19:22:54.16:873,54,0	1/1:1,12:13:27.09:461,27,0	0/0:32,0:32:78.27:0,78,1930	0/0:26,0:26:75.24:0,75,1814	1/1:4,17:21:33.06:509,33,0	1/1:4,11:15:12.01:175,12,0	1/1:1,13:14:21.04:329,21,0	1/1:5,15:20:42.12:659,42,0	1/1:5,16:21:33.11:566,33,0	1/1:3,9:12:27.08:419,27,0	1/1:3,8:10:21.07:359,21,0	1/1:5,14:18:24.08:412,24,0	0/0:23,0:23:57.18:0,57,1363	0/0:20,0:20:57.17:0,57,1335	0/0:25,0:25:69.23:0,69,1626	1/1:1,8:9:12.01:175,12,0	1/1:4,20:24:60.21:1021,60,0	1/1:5,13:19:30.27:514,30,0	1/1:1,8:9:18.06:309,18,0
chr10	54500906	.	CGT	C	133.50	PASS	AB=0.982;AC=7;AF=0.125;AN=56;BaseQRankSum=4.802;DP=656;FS=2.059;HRun=0;HaplotypeScore=151.4499;InbreedingCoeff=0.0799;MQ=57.74;MQ0=2;MQRankSum=-1.944;QD=1.30;ReadPosRankSum=-5.234;VQSLOD=0.9944;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:52:99:0,105,1210	0/0:12,0:12:5.60:0,6,226	0/0:35,0:23:60.93:0,61,1078	0/0:36,0:20:40.63:0,41,713	0/0:11,4:15:3.95:0,4,40	0/1:15,0:15:6.09:17,0,6	0/0:31,11:42:8.62:0,9,68	0/1:27,3:29:98.80:99,0,100	0/1:23,0:23:27.98:28,0,36	0/1:20,0:19:30.51:31,0,70	1/1:9,0:9:2.99:23,3,0	0/0:21,0:21:63.22:0,63,1238	0/0:20,0:20:60.21:0,60,1201	0/0:19,0:19:1.88:0,2,6	0/0:14,0:13:5.36:0,5,22	0/0:24,0:24:60.16:0,60,718	0/0:23,0:23:48.59:0,49,528	0/0:17,0:17:38.59:0,39,430	0/0:17,0:15:42.13:0,42,747	0/0:23,0:23:48.16:0,48,883	0/0:73,0:73:99:0,172,3325	0/0:14,0:14:39.13:0,39,738	0/0:12,0:12:36.12:0,36,687	0/0:44,0:44:99:0,126,2399	0/0:7,2:7:3.45:0,3,24	0/0:12,0:12:5.37:0,5,30	0/0:18,0:18:42.14:0,42,797	0/1:6,0:6:25.06:60,0,25
chr10	54500908	.	T	TACACACACACACACAC	5608.90	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=2.054;DP=720;FS=2.865;HRun=0;HaplotypeScore=292.3221;InbreedingCoeff=0.8310;MQ=55.68;MQ0=4;MQRankSum=-6.548;QD=21.41;ReadPosRankSum=-5.821;VQSLOD=2.4037;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:56:79.17:0,79,1909	0/0:2,0:12:1.66:0,2,368	0/0:38,0:24:47.35:0,47,1052	0/0:37,0:21:32.52:0,33,601	1/1:13,0:13:1.53:50,2,0	1/1:1,12:24:6.02:378,6,0	1/1:45,0:45:31.78:535,32,0	1/1:32,0:31:60.65:887,61,0	1/1:5,0:26:21.07:753,21,0	1/1:5,17:23:34.39:824,34,0	1/1:1,7:12:3.01:147,3,0	0/0:21,0:21:60.18:0,60,1932	0/0:21,0:21:63.20:0,63,2167	1/1:1,16:24:3.37:229,3,0	1/1:0,10:25:6.02:408,6,0	0/0:4,0:25:47.90:0,48,1014	0/0:7,0:26:36.52:0,37,802	0/0:3,0:18:25.46:0,25,612	0/0:18,0:16:32.47:0,32,644	0/0:23,0:23:36.05:0,36,1085	0/0:72,0:72:99:0,156,5620	0/0:15,0:15:27.08:0,27,1030	0/0:12,0:12:33.11:0,33,1102	0/0:43,0:43:99:0,108,3941	1/1:9,0:7:3.01:51,3,0	1/1:3,9:20:27.98:1132,28,0	0/0:20,0:20:36.09:0,36,1169	1/1:6,0:6:12.04:215,12,0
chr10	54500925	.	ACG	A	3974.33	PASS	AB=1.000;AC=12;AF=0.214;AN=56;BaseQRankSum=0.752;DP=668;FS=8.229;HRun=0;HaplotypeScore=141.7743;InbreedingCoeff=0.5180;MQ=51.96;MQ0=7;MQRankSum=-0.980;QD=18.23;ReadPosRankSum=2.544;VQSLOD=3.7403;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:45:99:0,108,1889	0/0:10,0:10:20.86:0,21,364	0/0:39,1:26:29.38:0,29,980	0/0:27,0:17:32.76:0,33,559	0/1:14,0:14:12.27:12,0,49	0/0:21,0:21:14.49:0,14,114	0/1:43,0:43:72.61:73,0,202	0/1:26,0:25:76.74:77,0,261	0/0:21,0:21:34.93:0,35,352	0/0:15,0:14:13.27:0,13,125	0/0:8,0:8:5.82:0,6,37	0/0:22,0:22:66.13:0,66,1058	0/0:27,0:27:78.21:0,78,1371	0/0:22,0:23:11.35:0,11,77	0/0:21,0:20:11.98:0,12,102	0/0:24,0:24:60.12:0,60,1033	0/0:27,0:27:50.83:0,51,1086	0/0:18,0:18:48.12:0,48,812	1/1:5,17:20:33.21:580,33,0	1/1:2,14:16:33.07:471,33,0	1/1:6,68:72:99:2227,150,0	0/0:12,0:12:30.10:0,30,556	0/0:12,0:12:33.11:0,33,606	0/0:39,0:39:99:0,114,2015	0/0:10,0:8:2.33:0,2,37	0/0:25,0:23:23.20:0,23,313	1/1:0,15:15:33.11:504,33,0	0/1:8,0:8:30.19:30,0,54
chr10	54501597	.	AT	A	8441.02	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=6.137;DP=471;FS=0.972;HRun=9;HaplotypeScore=51.9578;InbreedingCoeff=0.9819;MQ=77.95;MQ0=0;MQRankSum=-1.785;QD=22.39;ReadPosRankSum=1.928;VQSLOD=5.5928;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,30:33:68.04:620,68,0	1/1:0,12:12:29.97:266,30,0	0/0:13,0:12:26.98:0,27,257	0/0:10,0:9:18.04:0,18,193	1/1:1,19:20:56.98:513,57,0	1/1:1,14:15:39.02:357,39,0	1/1:3,31:34:87.04:796,87,0	1/1:2,10:12:29.99:268,30,0	1/1:0,18:18:51.03:467,51,0	1/1:2,19:21:57.02:522,57,0	1/1:4,10:14:35.95:317,36,0	0/0:15,0:15:39.12:0,39,450	0/0:10,0:10:30.09:0,30,346	1/1:2,21:23:57.03:522,57,0	1/1:1,9:10:21.01:192,21,0	1/1:1,9:10:18.01:165,18,0	1/1:1,21:22:51.03:467,51,0	1/1:2,22:24:54.02:493,54,0	1/1:1,7:8:20.98:182,21,0	1/1:0,13:13:35.94:319,36,0	1/1:4,21:25:48.02:439,48,0	0/0:12,1:13:8.64:0,9,353	0/0:6,0:6:18.05:0,18,208	0/0:27,0:27:66.20:0,66,762	1/1:0,13:13:33.02:302,33,0	1/1:2,19:21:57.02:521,57,0	1/1:2,15:17:45.02:412,45,0	1/1:0,12:12:33.02:302,33,0
chr10	54502187	.	TGGG	T	2357.62	PASS	AC=10;AF=0.185;AN=54;BaseQRankSum=-1.508;DP=475;FS=21.958;HRun=12;HaplotypeScore=79.8317;InbreedingCoeff=0.8614;MQ=75.53;MQ0=0;MQRankSum=-1.730;QD=24.56;ReadPosRankSum=6.399;VQSLOD=0.4895;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,30:33:75.18:921,75,0	1/1:2,7:9:18.05:227,18,0	0/0:21,0:20:28.34:0,28,482	0/0:8,0:8:14.80:0,15,205	0/0:15,0:18:20.95:0,21,301	0/0:13,0:13:24.05:0,24,373	0/0:12,0:14:24.04:0,24,401	0/0:20,0:22:11.97:0,12,179	./.	0/0:13,0:13:12.03:0,12,190	0/0:18,0:19:3.47:0,3,60	0/0:18,0:20:39.07:0,39,542	0/0:15,0:16:15.92:0,16,246	0/0:11,0:14:7.24:0,7,84	0/0:11,0:14:16.58:0,17,226	1/1:4,17:21:48.12:602,48,0	1/1:2,14:16:33.06:399,33,0	1/1:5,12:17:29.70:378,30,0	0/0:6,0:18:16.69:0,17,52	0/0:7,0:17:12.96:0,13,45	0/0:7,0:29:22.43:0,22,48	0/0:14,0:14:14.88:0,15,260	0/0:22,0:22:8.74:0,9,176	0/0:8,0:10:15.01:0,15,209	0/0:16,0:16:12.04:0,12,195	0/0:15,0:15:6.49:0,6,106	0/0:4,0:30:26.64:0,27,58	0/0:6,0:6:15.05:0,15,296
chr10	54503556	.	AGAGGACTCCTCCT	A	26559.01	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=18.542;DP=572;FS=4.570;HRun=0;HaplotypeScore=265.3152;InbreedingCoeff=0.9976;MQ=77.05;MQ0=0;MQRankSum=-18.359;QD=84.85;ReadPosRankSum=1.999;VQSLOD=4.2882;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:84.29:0,84,5181	0/0:10,0:10:30.10:0,30,1872	0/0:21,0:21:56.98:0,57,2790	0/0:22,0:22:54.08:0,54,2511	1/1:15,4:19:45.15:1751,45,0	1/1:20,0:20:45.15:1759,45,0	1/1:17,2:19:36.12:1408,36,0	1/1:20,0:20:39.09:1525,39,0	1/1:22,0:22:45.11:1667,45,0	1/1:18,0:18:42.14:1643,42,0	1/1:16,0:16:45.15:1759,45,0	0/0:26,0:26:75.24:0,75,4398	0/0:21,0:21:60.21:0,60,3729	1/1:22,0:22:60.19:2347,60,0	1/1:27,0:27:60.21:2347,60,0	0/0:23,0:23:63.22:0,63,3803	0/0:30,0:30:90.31:0,90,5625	0/0:15,0:15:45.15:0,45,2749	1/1:14,3:17:33.07:1107,33,0	1/1:17,0:17:39.13:1526,39,0	1/1:17,0:17:14.98:446,15,0	0/0:25,0:25:72.25:0,72,4684	0/0:14,0:14:42.14:0,42,2675	0/0:24,0:23:62.80:0,63,3849	1/1:17,3:20:45.15:1759,45,0	1/1:26,0:26:57.20:2230,57,0	1/1:21,0:21:51.18:1994,51,0	1/1:12,0:12:33.11:1291,33,0
chr10	54503560	.	GAC	G	6300.80	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=18.296;DP=515;FS=9.246;HRun=0;HaplotypeScore=201.5577;InbreedingCoeff=0.9990;MQ=79.70;MQ0=0;MQRankSum=-18.273;QD=25.00;ReadPosRankSum=2.646;VQSLOD=5.0789;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:87.30:0,87,1742	0/0:11,0:11:33.11:0,33,660	0/0:21,0:21:39.36:0,39,1048	0/0:21,0:21:54.16:0,54,997	1/1:4,14:18:44.80:379,45,0	1/1:1,17:18:45.03:407,45,0	1/1:3,11:14:35.86:311,36,0	1/1:0,15:15:45.06:427,45,0	1/1:3,14:17:50.95:442,51,0	1/1:0,15:15:42.05:398,42,0	1/1:0,16:16:44.93:377,45,0	0/0:27,0:27:81.26:0,81,1593	0/0:21,0:21:63.22:0,63,1257	1/1:1,20:21:63.01:556,63,0	1/1:0,20:20:60.03:536,60,0	0/0:22,0:22:66.23:0,66,1323	0/0:31,0:31:93.32:0,93,1871	0/0:16,0:16:48.16:0,48,973	1/1:4,8:12:29.87:270,30,0	1/1:1,13:14:39.02:351,39,0	1/1:2,6:8:19.75:152,20,0	0/0:25,0:25:75.26:0,75,1503	0/0:16,0:16:45.15:0,45,913	0/0:23,0:22:66.21:0,66,1293	1/1:3,14:17:44.86:387,45,0	1/1:0,19:19:57.06:538,57,0	1/1:0,17:17:51.02:460,51,0	1/1:1,10:11:33.05:311,33,0
chr10	54503563	.	TCCTCCTGAGGG	T	19531.17	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=18.713;DP=501;FS=5.121;HRun=0;HaplotypeScore=245.3718;InbreedingCoeff=0.9953;MQ=75.57;MQ0=0;MQRankSum=-18.650;QD=80.71;ReadPosRankSum=3.605;VQSLOD=4.5187;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:84.29:0,84,4154	0/0:11,0:11:33.11:0,33,1587	0/0:17,0:17:48.16:0,48,2366	0/0:19,0:19:54.13:0,54,2245	1/1:4,14:18:30.43:1255,30,0	1/1:0,17:17:45.15:1303,45,0	1/1:2,11:13:36.12:1028,36,0	1/1:2,13:15:39.13:1152,39,0	1/1:0,14:14:42.14:1208,42,0	1/1:0,15:15:42.14:1236,42,0	1/1:0,16:16:45.15:1275,45,0	0/0:26,0:26:78.27:0,78,4259	0/0:22,0:22:63.22:0,63,3531	1/1:0,20:20:60.21:1726,60,0	1/1:0,20:20:60.21:1731,60,0	0/0:22,0:22:63.22:0,63,2943	0/0:31,0:31:93.32:0,93,4389	0/0:17,0:17:51.18:0,51,2354	1/1:3,8:11:25.60:784,26,0	1/1:0,13:13:39.13:1128,39,0	1/1:1,5:6:12.04:304,12,0	0/0:26,0:26:78.27:0,78,4520	0/0:17,0:17:48.16:0,48,2562	0/0:22,0:21:62.94:0,63,3523	1/1:3,14:17:45.15:1282,45,0	1/1:0,19:19:57.20:1674,57,0	1/1:0,17:17:51.18:1476,51,0	1/1:1,10:11:33.11:968,33,0
chr10	54505398	.	C	CTGTG	1144.71	PASS	AB=0.976;AC=21;AF=0.404;AN=52;BaseQRankSum=-1.707;DP=558;FS=18.047;HRun=0;HaplotypeScore=130.7985;InbreedingCoeff=0.3567;MQ=58.26;MQ0=19;MQRankSum=-3.650;QD=3.89;ReadPosRankSum=-1.208;VQSLOD=1.4143;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:15.05:0,15,183	0/0:4,0:3:6.02:0,6,88	./.	./.	1/1:25,0:23:11.93:114,12,0	0/1:20,0:20:2.26:2,0,80	0/1:27,0:22:16.51:90,0,17	1/1:28,0:26:7.77:63,8,0	0/1:21,0:21:4.14:129,0,4	1/1:17,0:16:11.51:62,12,0	1/1:16,0:15:5.39:23,5,0	0/1:13,0:13:36.16:36,0,76	0/0:10,0:10:8.72:0,9,117	1/1:22,0:21:17.26:139,17,0	1/1:19,1:19:7.91:108,8,0	0/0:14,0:13:15.05:0,15,206	0/0:11,0:10:3.01:0,3,33	0/0:9,0:9:9.02:0,9,104	0/0:21,0:20:18.03:0,18,174	0/0:28,0:28:5.98:0,6,49	0/0:28,0:24:14.41:0,14,191	0/1:16,0:15:17.79:18,0,271	0/0:17,0:17:18.04:0,18,241	0/0:18,0:18:18.05:0,18,238	0/1:16,4:17:31.91:64,0,32	1/1:28,0:28:25.35:278,25,0	0/0:13,0:13:15.04:0,15,183	0/1:21,0:21:93.63:196,0,94
chr10	54505437	.	TGTGTGTGAGAGA	T	1655.56	PASS	AB=0.932;AC=11;AF=0.196;AN=56;BaseQRankSum=2.172;DP=501;FS=5.454;HRun=0;HaplotypeScore=153.7394;InbreedingCoeff=0.2070;MQ=47.52;MQ0=30;MQRankSum=2.122;QD=11.11;ReadPosRankSum=0.765;VQSLOD=2.4672;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:21,0:21:40.75:41,0,207	0/1:5,0:3:50.75:51,0,86	0/0:10,0:1:3.01:0,3,90	0/0:24,0:6:17.99:0,18,296	0/0:15,0:14:17.91:0,18,436	0/0:19,0:18:30.34:0,30,743	0/0:23,0:17:22.28:0,22,489	0/0:18,0:16:42.06:0,42,708	0/0:25,0:25:36.39:0,36,1041	0/0:16,0:14:36.11:0,36,1019	0/0:19,0:17:20.87:0,21,353	0/0:19,0:19:48.10:0,48,1373	0/0:12,0:12:20.55:0,21,448	0/0:18,0:16:25.02:0,25,639	0/0:23,0:21:14.93:0,15,351	0/1:12,0:11:99:114,0,211	0/1:7,0:7:8.27:8,0,120	0/1:11,0:9:75.91:76,0,344	0/1:18,0:17:80.99:584,0,81	0/1:3,26:28:6.95:209,0,7	1/1:35,0:31:14.73:285,15,0	0/0:19,0:18:38.49:0,38,1282	0/0:13,0:13:27.54:0,28,667	0/0:21,0:20:42.14:0,42,1375	0/0:14,0:11:12.04:0,12,365	0/0:22,0:21:60.03:0,60,1710	1/1:9,2:11:18.06:445,18,0	0/0:22,0:21:54.19:0,54,1677
chr10	54505439	.	TGTGTGAGAGAGA	T	1272.35	PASS	AB=0.949;AC=11;AF=0.196;AN=56;BaseQRankSum=3.614;DP=502;FS=3.243;HRun=0;HaplotypeScore=157.4546;InbreedingCoeff=0.1956;MQ=47.85;MQ0=29;MQRankSum=2.539;QD=8.48;ReadPosRankSum=0.566;VQSLOD=2.4970;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:20,0:20:99:115,0,191	0/1:6,0:4:24.27:24,0,228	0/0:8,0:1:3.01:0,3,119	0/0:23,0:6:18.06:0,18,398	0/0:16,0:15:20.62:0,21,442	0/0:18,0:17:26.56:0,27,721	0/0:24,0:18:21.52:0,22,368	0/0:20,0:19:53.97:0,54,992	0/0:25,0:25:35.84:0,36,930	0/0:16,0:14:33.11:0,33,1111	0/0:20,0:18:26.72:0,27,320	0/0:19,0:19:46.96:0,47,1598	0/0:12,0:12:17.64:0,18,470	0/0:17,0:16:25.02:0,25,497	0/0:24,0:22:14.81:0,15,322	0/1:13,0:12:81.45:81,0,386	0/1:7,0:7:23.09:23,0,231	0/1:12,0:10:82.91:83,0,451	0/1:8,10:17:99:426,0,110	0/1:28,0:27:7.96:150,0,8	1/1:35,0:32:14.98:173,15,0	0/0:18,0:17:38.50:0,39,1256	0/0:13,0:13:26.65:0,27,637	0/0:20,0:19:45.15:0,45,1609	0/0:14,0:11:12.04:0,12,351	0/0:23,0:22:63.03:0,63,1860	1/1:11,0:11:18.06:356,18,0	0/0:22,0:21:54.13:0,54,1576
chr10	54505443	.	TGAGAGA	T	431.60	PASS	AB=1.000;AC=5;AF=0.093;AN=54;BaseQRankSum=2.589;DP=531;FS=13.493;HRun=0;HaplotypeScore=134.4304;InbreedingCoeff=0.4479;MQ=47.49;MQ0=27;MQRankSum=1.423;QD=7.85;ReadPosRankSum=1.982;VQSLOD=1.9383;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:25:9.03:0,9,157	0/0:7,0:5:11.71:0,12,220	0/0:11,0:1:3.01:0,3,90	0/0:26,0:8:24.01:0,24,460	0/0:17,0:16:6.02:0,6,148	0/0:17,0:16:15.94:0,16,415	0/0:17,0:20:3.01:0,3,78	0/0:20,0:20:45.03:0,45,836	0/0:25,0:25:12.03:0,12,331	0/0:18,0:16:39.13:0,39,956	0/0:10,0:18:23.74:0,24,268	0/0:20,0:20:45.15:0,45,1118	0/0:9,0:12:12.04:0,12,253	0/0:17,0:16:6.02:0,6,108	0/0:17,0:26:8.67:0,9,117	0/0:19,0:18:15.52:0,16,378	0/0:9,0:9:12.04:0,12,224	0/0:12,0:10:15.52:0,16,382	0/1:17,0:17:61.89:270,0,62	1/1:27,0:26:6.02:109,6,0	./.	0/0:19,0:18:26.69:0,27,628	0/0:13,0:13:9.50:0,10,253	0/0:22,0:21:35.91:0,36,849	0/0:13,0:10:7.84:0,8,154	0/0:24,0:23:45.14:0,45,999	1/1:5,0:11:9.03:164,9,0	0/0:22,0:21:32.98:0,33,785
chr10	54505844	.	T	TAAA	9358.37	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=-11.065;DP=640;FS=3.782;HRun=12;HaplotypeScore=113.4672;InbreedingCoeff=0.9302;MQ=73.61;MQ0=2;MQRankSum=-2.671;QD=26.14;ReadPosRankSum=-4.212;VQSLOD=3.0444;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:56:99:0,123,746	0/0:1,0:9:17.59:0,18,106	0/0:20,0:17:0.56:0,1,191	0/0:15,0:14:5.49:0,5,66	1/1:6,25:37:76.78:919,77,0	1/1:7,15:22:31.35:554,31,0	1/1:3,8:13:22.30:356,22,0	1/1:12,19:34:65.79:977,66,0	1/1:3,12:15:33.02:535,33,0	1/1:13,9:27:63.08:877,63,0	1/1:3,13:19:41.97:549,42,0	0/0:18,0:18:47.98:0,48,509	0/0:22,0:22:47.90:0,48,528	1/1:5,7:14:9.03:165,9,0	1/1:6,16:25:42.12:702,42,0	0/0:3,0:24:55.62:0,56,337	0/0:2,0:33:67.11:0,67,408	0/0:0,0:16:38.25:0,38,231	1/1:9,14:26:54.07:784,54,0	1/1:4,14:23:54:742,54,0	1/1:2,12:16:21.96:370,22,0	0/0:20,0:23:26.46:0,26,469	0/0:19,0:22:27.18:0,27,320	0/0:18,0:22:38.78:0,39,438	1/1:0,12:13:12.04:221,12,0	1/1:11,17:32:62.15:905,62,0	1/1:12,15:32:30.55:483,31,0	1/1:2,8:10:12.04:220,12,0
chr10	54506888	.	T	TAA	5345.24	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=14.801;DP=597;FS=6.469;HRun=0;HaplotypeScore=106.8021;InbreedingCoeff=0.9963;MQ=81.81;MQ0=1;MQRankSum=-1.999;QD=31.63;ReadPosRankSum=2.841;VQSLOD=7.0559;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,31:32:76.22:1058,76,0	1/1:1,7:8:19.88:266,20,0	0/0:30,0:29:71.22:0,71,815	0/0:23,0:20:16.75:0,17,274	0/0:32,0:32:93.30:0,93,1493	0/0:21,0:20:60.20:0,60,970	0/0:21,0:21:63.21:0,63,1005	0/0:24,0:24:72.24:0,72,1146	0/0:14,0:14:42.11:0,42,635	0/0:32,0:32:96.33:0,96,1561	0/0:22,0:22:63.22:0,63,1026	0/0:25,0:25:75.26:0,75,1215	0/0:18,0:18:54.15:0,54,809	0/0:20,0:20:60.19:0,60,948	0/0:15,0:15:45.13:0,45,688	1/1:1,10:11:27.09:406,27,0	1/1:3,22:25:50.05:767,50,0	1/1:4,11:16:34.95:515,35,0	1/1:8,9:17:29.33:436,29,0	1/1:3,24:27:71.83:1003,72,0	1/1:1,9:10:19.84:288,20,0	0/0:22,0:22:66.23:0,66,1074	0/0:19,0:19:57.19:0,57,898	0/0:13,0:13:36.11:0,36,561	0/0:21,0:21:60.20:0,60,967	0/0:33,0:33:99:0,99,1475	1/1:4,17:22:42.06:605,42,0	0/0:22,0:22:66.21:0,66,1049
chr10	54508017	.	A	AC	26221.09	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=-15.799;DP=800;FS=8.629;HRun=1;HaplotypeScore=70.3862;InbreedingCoeff=0.9971;MQ=63.46;MQ0=3;MQRankSum=1.321;QD=42.71;ReadPosRankSum=1.680;VQSLOD=4.9123;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,42:44:99:1956,123,0	1/1:0,16:16:45.15:707,45,0	0/0:34,0:30:84.10:0,84,1052	0/0:23,0:23:63.11:0,63,785	1/1:1,25:26:66.16:1024,66,0	1/1:0,16:16:39.13:623,39,0	1/1:0,28:28:69.24:1099,69,0	1/1:1,35:35:96.29:1474,96,0	1/1:0,36:36:99:1630,102,0	1/1:4,20:23:60.20:950,60,0	1/1:1,19:20:54.10:831,54,0	0/0:23,0:23:66.22:0,66,921	0/0:20,0:20:57.19:0,57,793	1/1:0,24:24:63.21:1006,63,0	1/1:0,34:34:90.31:1438,90,0	1/1:1,33:34:99:1571,99,0	1/1:0,37:37:99:1630,102,0	1/1:1,41:41:99:1869,117,0	1/1:4,15:19:45.12:671,45,0	1/1:0,35:35:99:1553,99,0	1/1:1,55:56:99:2349,148,0	0/0:35,0:35:99:0,105,1431	0/0:21,0:21:63.21:0,63,879	0/0:29,0:29:87.29:0,87,1214	1/1:0,33:33:90.31:1438,90,0	1/1:0,21:21:60.19:916,60,0	1/1:1,27:28:78.27:1246,78,0	1/1:0,5:5:15.05:240,15,0
chr10	54508720	.	T	TGTGTGTGTGTGT	5665.29	PASS	AB=1.000;AC=38;AF=0.704;AN=54;BaseQRankSum=-2.600;DP=551;FS=30.743;HRun=0;HaplotypeScore=181.1319;InbreedingCoeff=0.5022;MQ=57.88;MQ0=19;MQRankSum=-5.382;QD=13.27;ReadPosRankSum=-4.979;VQSLOD=0.7602;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:26:13.29:351,13,0	1/1:5,0:5:0.47:1,0,0	0/1:41,0:16:6.61:7,0,56	0/1:31,0:18:15.78:16,0,85	1/1:10,0:9:0.47:1,0,0	1/1:14,0:14:6.01:126,6,0	1/1:23,0:20:3.38:96,3,0	1/1:35,0:29:39.99:936,40,0	1/1:17,6:22:6:95,6,0	1/1:26,0:26:29.93:857,30,0	0/1:9,0:9:0:0,0,0	0/0:20,0:20:27.06:0,27,714	0/0:19,0:19:41.71:0,42,1225	1/1:29,0:23:2.94:18,3,0	1/1:23,0:22:6.02:203,6,0	1/1:18,0:18:6.02:161,6,0	1/1:19,0:17:7.26:210,7,0	0/1:13,0:9:19.15:337,0,19	1/1:12,0:10:12.04:444,12,0	1/1:15,0:15:12.51:274,13,0	0/0:13,0:13:1.25:0,1,3	0/0:26,0:26:26.63:0,27,817	0/0:12,0:11:21.07:0,21,558	0/0:30,0:29:45.15:0,45,1334	1/1:11,0:10:4.04:16,4,0	1/1:21,0:21:30.08:839,30,0	1/1:19,0:19:24.08:679,24,0	./.
chr10	54510091	.	T	TTG	658.03	PASS	AB=0.874;AC=13;AF=0.260;AN=50;BaseQRankSum=0.026;DP=619;FS=0.808;HRun=0;HaplotypeScore=104.6318;InbreedingCoeff=0.2212;MQ=54.67;MQ0=19;MQRankSum=-0.858;QD=2.59;ReadPosRankSum=1.395;VQSLOD=2.2274;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:24,1:32:3:26,3,0	0/0:4,0:6:5.68:0,6,28	./.	./.	0/0:11,0:11:8.85:0,9,79	0/0:19,0:19:0.43:0,0,1	0/0:27,0:26:10.51:0,11,191	./.	0/1:23,2:24:1.25:221,0,1	0/0:20,0:20:11.55:0,12,116	0/0:12,0:13:6.02:0,6,64	1/1:22,1:23:6.01:70,6,0	0/1:15,0:20:20.19:20,0,26	0/0:26,0:26:35.81:0,36,329	0/0:23,0:20:8.84:0,9,89	0/0:6,0:11:5.63:0,6,28	0/1:21,9:31:91.81:152,0,92	0/0:28,0:27:25.54:0,26,225	0/1:17,0:21:7.09:7,0,8	0/1:14,0:22:4.13:19,0,4	0/0:41,0:38:0.34:0,0,1	0/1:19,0:20:2.97:79,0,3	1/1:16,0:16:5.79:37,6,0	0/1:22,15:41:18.57:163,0,19	0/0:20,0:20:20.95:0,21,224	0/0:20,0:20:9.49:0,9,95	0/0:12,0:14:6.93:0,7,31	0/0:12,0:11:3.01:0,3,30
chr10	54510337	.	C	CGG	4269.21	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-1.664;DP=583;FS=4.932;HRun=8;HaplotypeScore=96.7360;InbreedingCoeff=0.9914;MQ=88.67;MQ0=0;MQRankSum=-2.164;QD=25.56;ReadPosRankSum=-0.520;VQSLOD=4.3198;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,19:24:39.13:615,39,0	1/1:1,0:8:17.47:60,17,0	0/0:30,0:30:47.16:0,47,654	0/0:23,0:23:46.58:0,47,467	0/0:24,0:24:69.19:0,69,769	0/0:24,0:24:69.18:0,69,769	0/0:24,0:24:69.14:0,69,749	0/0:23,0:23:53.85:0,54,573	0/0:22,0:22:57.13:0,57,626	0/0:31,0:31:78.17:0,78,857	0/0:20,0:21:45.04:0,45,560	0/0:19,0:19:51.12:0,51,568	0/0:18,0:18:54.15:0,54,601	0/0:23,0:23:66.18:0,66,736	0/0:13,0:13:39.11:0,39,435	1/1:2,0:15:29.94:103,30,0	1/1:5,20:25:57.19:893,57,0	1/1:4,12:16:21.07:333,21,0	1/1:3,9:13:27.09:425,27,0	1/1:10,18:29:48.16:745,48,0	1/1:3,10:13:18.06:286,18,0	0/0:24,0:24:60.14:0,60,669	0/0:19,1:20:12.54:0,13,587	0/0:23,0:23:54.13:0,54,602	0/0:16,0:16:39.08:0,39,435	0/0:28,0:28:72.14:0,72,788	1/1:5,19:23:51.17:809,51,0	0/0:10,0:10:21.02:0,21,234
chr10	54511339	.	C	CGTGTGTGTGT	1693.99	PASS	AB=0.896;AC=12;AF=0.214;AN=56;BaseQRankSum=3.456;DP=503;FS=11.195;HRun=0;HaplotypeScore=180.4618;InbreedingCoeff=0.4891;MQ=64.58;MQ0=4;MQRankSum=-4.865;QD=14.86;ReadPosRankSum=-0.993;VQSLOD=2.0178;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:16:13.23:164,13,0	1/1:0,0:5:4.57:79,5,0	0/0:23,0:11:14.66:0,15,301	0/0:24,0:12:22.90:0,23,199	0/0:12,0:12:33.10:0,33,776	0/0:16,0:16:48.15:0,48,997	0/0:32,0:31:89.97:0,90,1899	0/0:14,0:14:42.05:0,42,703	0/0:21,0:21:57.18:0,57,1510	0/0:23,0:23:65.76:0,66,1390	0/0:15,0:15:36.09:0,36,662	0/0:20,0:20:50.84:0,51,1194	0/0:23,0:23:69.19:0,69,1828	0/0:24,0:24:69.19:0,69,1661	0/0:23,0:23:69.10:0,69,1493	0/1:2,0:6:4.47:123,0,4	1/1:2,9:16:1.06:244,1,0	1/1:3,1:18:10.80:627,11,0	0/1:15,0:14:99:163,0,278	0/1:16,0:16:81.19:81,0,246	0/0:11,0:10:12.01:0,12,162	0/0:17,0:17:48.16:0,48,1402	0/0:16,0:16:42.10:0,42,774	0/0:36,0:36:99:0,102,2703	0/0:15,0:15:42.05:0,42,757	0/0:17,0:17:50.18:0,50,1224	0/1:21,0:21:99:370,0,212	0/0:7,0:7:14.26:0,14,243
chr10	54511340	.	ATG	A	3785.87	PASS	AB=0.896;AC=26;AF=0.464;AN=56;BaseQRankSum=2.273;DP=536;FS=0.491;HRun=0;HaplotypeScore=111.7435;InbreedingCoeff=0.5071;MQ=63.66;MQ0=5;MQRankSum=0.164;QD=12.92;ReadPosRankSum=-1.568;VQSLOD=3.2061;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:9:0,9,109	0/0:9,0:9:2.96:0,3,19	0/0:25,0:12:3.01:0,3,47	0/0:24,0:12:6.48:0,6,63	1/1:5,6:12:17.88:189,18,0	1/1:9,5:16:20.72:203,21,0	1/1:19,12:31:44.62:454,45,0	1/1:9,5:14:15.04:175,15,0	1/1:6,14:21:44.96:500,45,0	1/1:11,13:24:41.91:467,42,0	1/1:9,5:14:9.03:105,9,0	0/1:20,0:20:22.61:23,0,406	0/0:22,1:23:16.28:0,16,713	1/1:7,16:24:50.98:574,51,0	1/1:6,12:22:47.47:476,47,0	0/0:11,0:10:3:0,3,27	0/0:17,0:17:0.34:0,0,13	0/0:17,0:17:25.04:0,25,200	0/0:11,0:15:15.91:0,16,163	0/0:7,0:17:2.92:0,3,17	0/0:13,0:12:3.01:0,3,43	0/0:16,1:17:4.13:0,4,529	0/1:15,1:16:22.95:23,0,128	0/1:34,3:38:5.20:5,0,990	0/1:9,5:15:46.05:133,0,46	1/1:4,10:17:38.61:391,39,0	0/0:11,0:24:17.59:0,18,180	1/1:3,4:7:6.02:69,6,0
chr10	54511410	.	AC	A	12321.44	PASS	AB=1.000;AC=53;AF=0.946;AN=56;BaseQRankSum=-3.298;DP=527;FS=2.947;HRun=2;HaplotypeScore=176.5141;InbreedingCoeff=0.6287;MQ=55.74;MQ0=2;MQRankSum=-3.745;QD=23.65;ReadPosRankSum=1.540;VQSLOD=4.6150;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:26:37.23:291,37,0	1/1:11,0:11:23.11:184,23,0	0/0:6,0:6:10.56:0,11,67	0/1:8,0:8:13.03:13,0,40	1/1:15,2:23:41.93:411,42,0	1/1:20,0:20:59.97:584,60,0	1/1:33,1:31:77.75:787,78,0	1/1:27,2:29:80.93:789,81,0	1/1:18,0:18:54.10:549,54,0	1/1:21,0:21:63.09:648,63,0	1/1:12,1:13:33.05:333,33,0	1/1:22,0:22:58.67:598,59,0	1/1:23,0:23:63.05:652,63,0	1/1:23,0:23:69.08:711,69,0	1/1:31,1:32:84.02:827,84,0	1/1:11,0:11:28.88:241,29,0	1/1:16,1:17:40.12:285,40,0	1/1:10,0:10:22.61:147,23,0	1/1:17,1:18:46.60:382,47,0	1/1:15,0:15:33.53:236,34,0	1/1:21,1:21:49.57:429,50,0	1/1:17,0:17:48.04:482,48,0	1/1:14,1:15:38.87:376,39,0	1/1:26,2:28:68.65:706,69,0	1/1:12,0:12:36.07:370,36,0	1/1:23,0:23:69.02:689,69,0	1/1:19,0:19:35.28:285,35,0	1/1:10,1:11:30.07:317,30,0
chr10	54511411	.	C	CA	15771.38	PASS	AB=1.000;AC=53;AF=0.946;AN=56;BaseQRankSum=-3.402;DP=522;FS=7.439;HRun=1;HaplotypeScore=162.5556;InbreedingCoeff=0.6866;MQ=56.21;MQ0=2;MQRankSum=-3.246;QD=30.68;ReadPosRankSum=1.989;VQSLOD=4.0652;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:16,10:26:44.85:448,45,0	1/1:6,6:12:30.88:256,31,0	0/1:6,0:6:4.66:5,0,73	0/0:8,0:8:7.18:0,7,54	1/1:8,15:23:42.03:481,42,0	1/1:2,20:22:65.11:746,65,0	1/1:6,26:30:82.90:1038,83,0	1/1:5,25:30:84.03:938,84,0	1/1:0,18:18:54.16:701,54,0	1/1:0,21:21:63.14:804,63,0	1/1:2,10:12:33.09:404,33,0	1/1:1,18:22:53.51:697,54,0	1/1:2,21:23:62.99:736,63,0	1/1:1,22:23:69.19:905,69,0	1/1:5,26:31:86.47:1002,86,0	1/1:7,4:11:30.02:354,30,0	1/1:13,3:16:42.40:423,42,0	1/1:8,2:10:23.96:228,24,0	1/1:6,11:17:48.11:581,48,0	1/1:8,6:14:35.69:342,36,0	1/1:20,2:21:52.76:592,53,0	1/1:2,15:17:48.13:611,48,0	1/1:1,13:14:39.02:456,39,0	1/1:6,22:28:69.14:924,69,0	1/1:0,12:12:36.06:428,36,0	1/1:1,22:23:69.09:850,69,0	1/1:12,5:17:21.85:439,22,0	1/1:2,9:11:30.09:384,30,0
chr10	54512340	.	TTCTCTC	T	618.72	PASS	AB=1.000;AC=31;AF=0.775;AN=40;BaseQRankSum=2.328;DP=401;FS=2.489;HRun=0;HaplotypeScore=86.6865;InbreedingCoeff=0.2740;MQ=71.82;MQ0=9;MQRankSum=0.413;QD=2.54;ReadPosRankSum=0.500;VQSLOD=1.7294;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:6.01:0,6,75	./.	./.	./.	1/1:12,0:11:2.22:7,2,0	./.	1/1:14,0:14:5.07:26,5,0	./.	1/1:8,0:13:6.02:84,6,0	1/1:16,0:15:3:28,3,0	0/0:8,0:10:0:0,0,0	1/1:9,6:15:3.01:60,3,0	1/1:12,0:12:5.51:60,6,0	1/1:12,0:11:7.60:56,8,0	1/1:16,0:16:6.17:43,6,0	1/1:16,0:16:1.41:2,1,0	0/0:16,0:16:5.48:0,5,46	0/1:13,0:12:24.79:33,0,25	0/1:24,0:24:0.06:0,0,0	1/1:21,0:20:3.01:58,3,0	./.	./.	0/1:12,0:12:0.11:0,0,0	1/1:6,0:5:6.01:77,6,0	1/1:8,0:8:2.37:8,2,0	1/1:20,0:20:2.94:48,3,0	1/1:13,0:13:5.18:133,5,0	./.
chr10	54512818	.	AT	A	7638.15	PASS	AB=1.000;AC=43;AF=0.768;AN=56;BaseQRankSum=3.310;DP=357;FS=1.570;HRun=7;HaplotypeScore=39.5495;InbreedingCoeff=0.8341;MQ=65.33;MQ0=5;MQRankSum=-1.680;QD=24.40;ReadPosRankSum=3.724;VQSLOD=4.6256;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,20:20:45.10:457,45,0	1/1:0,6:6:18.04:183,18,0	0/0:12,1:9:11.92:0,12,95	0/1:15,0:5:9.86:10,0,26	1/1:3,23:26:69.16:703,69,0	1/1:1,8:9:24.05:245,24,0	1/1:1,8:6:12.03:122,12,0	1/1:2,21:23:60.12:605,60,0	1/1:0,19:18:48.11:490,48,0	1/1:3,14:17:39.09:398,39,0	1/1:0,7:7:21.05:214,21,0	0/0:7,0:7:18.04:0,18,213	0/0:7,0:7:18.04:0,18,213	1/1:0,5:5:12.03:122,12,0	1/1:1,11:12:30.07:306,30,0	1/1:3,6:9:18.04:184,18,0	1/1:1,14:15:42.10:428,42,0	1/1:3,20:23:57.13:582,57,0	1/1:3,13:16:39.09:398,39,0	1/1:1,15:16:45.09:455,45,0	1/1:0,5:5:15.03:153,15,0	0/0:4,0:4:6.02:0,6,75	0/0:8,0:8:18.06:0,18,226	0/0:4,0:4:5.34:0,5,73	1/1:3,17:20:48.11:490,48,0	1/1:0,14:14:42.07:420,42,0	1/1:1,16:17:42.09:428,42,0	1/1:2,8:10:23.85:245,24,0
chr10	54513267	.	CT	C	2996.14	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=10.727;DP=613;FS=1.182;HRun=10;HaplotypeScore=75.5190;InbreedingCoeff=0.9534;MQ=67.95;MQ0=0;MQRankSum=-2.723;QD=20.24;ReadPosRankSum=4.365;VQSLOD=4.4172;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,25:26:68.98:599,69,0	1/1:2,14:16:8.80:304,9,0	0/0:21,0:16:1.61:0,2,240	0/0:20,0:17:35.77:0,36,338	0/0:39,0:42:99:0,111,1174	0/0:22,0:22:45.11:0,45,490	0/0:17,0:17:48.13:0,48,531	0/0:34,0:34:72.17:0,72,775	0/0:16,0:16:19.19:0,19,430	0/0:39,0:39:76.36:0,76,1068	0/0:27,1:28:52.15:0,52,794	0/0:24,0:24:66.18:0,66,730	0/0:23,0:23:63.15:0,63,680	0/0:22,0:22:60.59:0,61,644	0/0:32,2:34:61.16:0,61,886	1/1:2,17:19:44.98:391,45,0	1/1:1,12:13:32.99:287,33,0	1/1:2,11:13:32.98:286,33,0	1/1:4,11:15:35.95:306,36,0	1/1:1,18:19:50.95:436,51,0	1/1:1,6:7:14.99:130,15,0	0/0:14,0:14:33.09:0,33,365	0/0:22,0:22:66.18:0,66,729	0/0:9,0:9:24.06:0,24,265	0/0:33,0:33:87.24:0,87,961	0/0:24,2:26:60.16:0,60,664	1/1:0,20:20:53.99:469,54,0	0/0:19,0:19:51.14:0,51,564
chr10	54513294	.	T	TAA	899.37	PASS	AB=0.719;AC=5;AF=0.089;AN=56;BaseQRankSum=9.861;DP=568;FS=1.367;HRun=3;HaplotypeScore=97.9051;InbreedingCoeff=0.5056;MQ=69.65;MQ0=0;MQRankSum=-8.545;QD=18.35;ReadPosRankSum=-0.909;VQSLOD=0.7995;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:81.26:0,81,1204	0/0:17,0:17:51.17:0,51,780	0/0:17,0:16:34.57:0,35,517	0/0:12,0:11:24.06:0,24,327	0/0:39,0:39:99:0,117,1790	0/0:12,0:12:33.11:0,33,505	0/0:20,0:20:60.20:0,60,918	0/0:23,0:23:66.21:0,66,970	0/0:18,0:18:51.12:0,51,709	0/0:43,0:43:99:0,129,1951	0/0:26,0:26:78.25:0,78,1168	0/0:23,0:23:66.21:0,66,990	0/0:18,0:18:54.15:0,54,782	0/0:22,0:22:66.18:0,66,947	0/0:27,0:27:78.26:0,78,1194	0/0:20,0:20:60.19:0,60,898	0/0:10,0:10:24.08:0,24,365	0/0:11,0:11:33.11:0,33,494	0/1:11,3:14:6.15:269,0,6	0/1:6,5:11:38.08:188,0,38	1/1:4,0:4:9:80,9,0	0/0:15,0:15:42.14:0,42,642	0/0:24,0:24:72.22:0,72,1078	0/0:9,0:9:27.09:0,27,413	0/0:30,0:30:90.31:0,90,1378	0/0:23,0:23:69.22:0,69,1017	0/1:9,11:19:0.77:479,0,1	0/0:32,0:32:90.24:0,90,1329
chr10	54513296	.	T	TAAATAA	1762.94	PASS	AC=6;AF=0.111;AN=54;BaseQRankSum=9.008;DP=548;FS=14.976;HRun=0;HaplotypeScore=134.5347;InbreedingCoeff=0.9884;MQ=70.91;MQ0=0;MQRankSum=-6.663;QD=55.09;ReadPosRankSum=-0.249;VQSLOD=3.1020;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:78.18:0,78,1800	0/0:18,0:18:51.15:0,51,1171	0/0:15,0:15:17.77:0,18,727	0/0:12,0:11:24.06:0,24,465	0/0:39,0:39:99:0,117,2977	0/0:11,0:11:33.11:0,33,820	0/0:21,0:21:63.19:0,63,1454	0/0:21,0:21:63.18:0,63,1333	0/0:17,0:17:48.11:0,48,1012	0/0:43,0:43:99:0,129,2938	0/0:27,0:27:81.23:0,81,1813	0/0:23,0:23:66.20:0,66,1568	0/0:18,0:18:51.16:0,51,1246	0/0:22,0:22:66.17:0,66,1469	0/0:27,0:27:81.27:0,81,2019	0/0:21,0:21:63.19:0,63,1483	0/0:9,0:9:24.07:0,24,564	0/0:11,0:11:33.05:0,33,698	1/1:4,3:7:15.02:326,15,0	1/1:3,5:8:23.95:484,24,0	./.	0/0:14,0:14:42.12:0,42,940	0/0:25,0:25:72.23:0,72,1762	0/0:9,0:9:27.09:0,27,691	0/0:30,0:30:90.30:0,90,2222	0/0:23,0:23:66.22:0,66,1624	1/1:6,11:16:40.95:1093,41,0	0/0:32,0:32:93.28:0,93,2214
chr10	54513611	.	CACACACACACGCACGCACACACACACTT	C	4524.97	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=8.211;DP=921;FS=4.689;HRun=0;HaplotypeScore=546.0523;InbreedingCoeff=0.9530;MQ=57.43;MQ0=2;MQRankSum=-7.878;QD=30.37;ReadPosRankSum=3.506;VQSLOD=1.0548;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:10,41:51:18.06:855,18,0	1/1:2,15:17:9.03:632,9,0	0/0:36,0:20:11.30:0,11,1404	0/0:40,0:26:66.11:0,66,2031	0/0:45,0:45:99:0,126,9435	0/0:34,0:34:86.84:0,87,7618	0/0:38,0:37:96.24:0,96,7441	0/0:19,0:19:51.13:0,51,2179	0/0:36,0:36:99:0,99,7725	0/0:38,0:38:99:0,105,7576	0/0:24,0:24:69.09:0,69,6508	0/0:30,0:30:87.21:0,87,7949	0/0:25,0:25:71.95:0,72,4330	0/0:30,0:30:81.15:0,81,5116	0/0:33,0:33:90.25:0,90,7095	1/1:2,29:31:27.09:1975,27,0	1/1:2,31:33:8.59:494,9,0	1/1:1,16:17:11.97:569,12,0	0/0:20,0:19:48.11:0,48,2763	0/0:15,0:15:45.11:0,45,2776	0/0:98,0:98:99:0,277,22888	0/0:26,0:26:72.21:0,72,6125	0/0:26,0:26:69.16:0,69,5323	0/0:54,0:54:99:0,136,12229	0/0:34,0:34:90.22:0,90,7384	0/0:35,0:35:86.64:0,87,6674	0/0:15,0:15:42.10:0,42,3213	0/0:20,0:20:48.10:0,48,3208
chr10	54516569	.	G	GACACACACACAC	13023.31	PASS	AB=0.871;AC=43;AF=0.768;AN=56;BaseQRankSum=4.262;DP=854;FS=20.686;HRun=0;HaplotypeScore=283.9368;InbreedingCoeff=0.5834;MQ=56.77;MQ0=11;MQRankSum=-5.850;QD=18.68;ReadPosRankSum=-4.226;VQSLOD=1.9951;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:50,0:51:37.63:384,38,0	1/1:12,0:12:23.77:289,24,0	0/1:41,0:21:14.29:14,0,199	0/1:39,0:18:17.41:17,0,215	0/1:14,17:37:0:0,0,0	1/1:12,17:35:1.55:4,2,0	1/1:27,0:27:27.01:612,27,0	1/1:41,0:40:90.05:1358,90,0	1/1:14,12:30:6.02:254,6,0	1/1:24,0:37:78.15:2351,78,0	1/1:19,0:18:24.02:535,24,0	0/0:36,0:36:84.23:0,84,2101	0/0:28,0:28:26.17:0,26,1210	1/1:11,17:31:2.42:34,2,0	1/1:21,18:42:2.99:23,3,0	1/1:25,0:29:15.12:469,15,0	1/1:13,0:12:3.76:419,4,0	1/1:7,0:13:6.02:290,6,0	1/1:9,7:18:32.16:635,32,0	1/1:11,0:24:3.01:103,3,0	1/1:44,0:42:24.63:216,25,0	0/0:40,0:42:99:0,116,2898	0/0:22,0:22:57.16:0,57,1630	0/0:29,0:29:54.11:0,54,1325	1/1:9,12:26:3.01:177,3,0	1/1:27,16:47:99:3302,102,0	1/1:27,0:27:54.42:1249,54,0	1/1:8,0:8:18.06:286,18,0
chr10	54516587	.	CAT	C	1909.57	PASS	AB=0.943;AC=15;AF=0.268;AN=56;BaseQRankSum=7.635;DP=891;FS=41.113;HRun=0;HaplotypeScore=155.8532;InbreedingCoeff=-0.4048;MQ=46.92;MQ0=19;MQRankSum=-0.582;QD=3.86;ReadPosRankSum=-0.713;VQSLOD=1.0967;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:45,2:46:81.47:175,0,81	0/1:13,0:12:42.71:114,0,43	0/1:55,0:17:51.39:51,0,231	0/0:64,0:20:7.16:0,7,393	0/0:31,0:30:2.85:0,3,17	0/0:30,0:30:5.77:0,6,50	0/1:24,7:31:99:143,0,292	0/1:52,3:53:99:455,0,777	0/0:28,0:28:11.98:0,12,103	0/1:19,11:30:99:349,0,282	0/1:17,2:18:89.11:172,0,89	0/0:35,0:35:99:0,102,1664	0/0:26,0:26:72.13:0,72,1106	0/1:27,0:27:19.45:19,0,82	0/1:37,0:36:4.97:5,0,142	0/1:28,1:29:78.42:78,0,161	0/0:18,0:17:3.66:0,4,128	0/0:12,0:12:26.79:0,27,192	0/1:20,0:18:54.79:55,0,229	0/0:15,0:15:3.01:0,3,49	0/1:53,1:52:26.10:26,0,402	0/0:43,0:43:92.66:0,93,1878	0/0:32,0:31:87.01:0,87,1282	0/0:32,0:32:74.98:0,75,1139	0/0:29,1:30:14.85:0,15,174	0/1:40,2:41:99:247,0,733	0/1:28,0:27:75.97:76,0,227	0/1:7,1:8:29.16:94,0,29
chr10	54518305	.	A	AC	16152.43	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=-0.277;DP=591;FS=1.685;HRun=2;HaplotypeScore=74.2406;InbreedingCoeff=0.9605;MQ=79.18;MQ0=0;MQRankSum=-0.797;QD=35.50;ReadPosRankSum=1.217;VQSLOD=5.4328;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,45:46:99:1637,114,0	1/1:2,5:7:4.18:199,4,0	0/0:12,0:12:33.03:0,33,349	0/0:13,0:13:25.41:0,25,226	1/1:3,16:19:39.13:550,39,0	1/1:0,20:20:48.16:691,48,0	1/1:4,18:22:45.15:648,45,0	1/1:1,14:15:39.10:535,39,0	1/1:2,17:19:39.13:553,39,0	1/1:0,28:28:78.24:1070,78,0	1/1:0,6:6:15.05:216,15,0	0/0:21,0:21:63.18:0,63,765	0/0:26,0:26:72.22:0,72,880	1/1:1,29:30:78.26:1113,78,0	1/1:0,19:19:54.18:777,54,0	1/1:1,15:16:42.14:605,42,0	1/1:3,38:41:99:1463,102,0	1/1:0,31:31:84.28:1209,84,0	1/1:0,21:21:63.17:868,63,0	1/1:2,14:16:38.96:526,39,0	1/1:1,33:33:84.28:1209,84,0	0/0:21,0:21:58.06:0,58,698	0/0:15,0:15:36.11:0,36,437	0/0:28,0:28:81.25:0,81,1004	1/1:1,15:16:33.11:475,33,0	1/1:2,22:24:66.22:944,66,0	1/1:0,21:21:51.17:734,51,0	1/1:0,4:4:9.03:129,9,0
chr10	54518884	.	ACCCTGATGCTACACCCTGATGCTACC	A	7075.41	PASS	AB=1.000;AC=31;AF=0.554;AN=56;BaseQRankSum=-6.753;DP=584;FS=4.658;HRun=0;HaplotypeScore=313.7665;InbreedingCoeff=0.8808;MQ=57.80;MQ0=25;MQRankSum=1.414;QD=22.97;ReadPosRankSum=5.654;VQSLOD=2.8456;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:53.03:0,53,355	0/0:11,0:11:26.68:0,27,186	0/0:45,0:17:8.69:0,9,88	0/0:32,0:14:8.56:0,9,122	1/1:16,0:15:32.49:281,32,0	1/1:13,0:12:32.96:434,33,0	1/1:17,0:16:29.99:286,30,0	1/1:14,0:12:2.95:20,3,0	1/1:23,0:18:42.10:672,42,0	1/1:13,10:21:32.37:295,32,0	1/1:16,0:12:15:132,15,0	0/0:24,0:24:63.05:0,63,1046	0/0:24,0:24:63.08:0,63,965	1/1:26,0:21:54.06:764,54,0	1/1:21,0:17:51.09:740,51,0	0/0:16,0:16:41.73:0,42,319	0/0:14,0:14:29.68:0,30,208	0/0:13,0:13:23.78:0,24,170	1/1:12,0:9:18.04:250,18,0	1/1:11,0:11:20.60:275,21,0	1/1:42,0:30:71.87:985,72,0	0/0:21,0:21:53.55:0,54,755	0/0:7,0:7:15:0,15,203	0/0:44,0:44:99:0,126,1868	1/1:20,0:16:32.53:424,33,0	1/1:26,0:22:53.09:687,53,0	1/1:13,0:9:24:369,24,0	0/1:15,0:14:15.89:460,0,16
chr10	54520329	.	CA	C	1432.23	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=9.246;DP=571;FS=6.747;HRun=9;HaplotypeScore=56.8865;InbreedingCoeff=0.9910;MQ=65.28;MQ0=1;MQRankSum=-0.960;QD=20.17;ReadPosRankSum=1.548;VQSLOD=4.3282;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:54.16:0,54,622	0/0:7,0:7:18.05:0,18,208	0/0:17,1:16:18.95:0,19,289	0/0:10,0:8:15.35:0,15,137	0/0:27,0:27:75.22:0,75,865	0/0:16,0:16:24.07:0,24,277	0/0:22,1:23:57.17:0,57,658	0/0:29,0:29:75.19:0,75,840	0/0:15,0:15:42.12:0,42,485	0/0:25,0:25:66.15:0,66,746	0/0:15,0:15:44.50:0,44,493	0/0:21,0:22:63.02:0,63,707	0/0:24,0:24:72.21:0,72,830	0/0:20,0:20:54.13:0,54,610	0/0:26,0:26:69.21:0,69,796	0/0:22,0:22:60.17:0,60,683	0/0:26,0:26:66.20:0,66,762	0/0:28,1:29:56.78:0,57,900	1/1:4,16:20:48.01:434,48,0	1/1:0,16:16:45.02:412,45,0	1/1:2,9:12:29.04:253,29,0	0/0:24,0:24:69.19:0,69,786	0/0:14,0:14:36.11:0,36,416	0/0:23,0:23:60.18:0,60,692	0/0:26,0:26:69.19:0,69,787	0/0:22,0:22:60.18:0,60,692	1/1:3,20:23:53.91:494,54,0	0/0:17,0:16:51.14:0,51,577
chr10	54523306	.	A	AG	17063.93	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=-13.601;DP=640;FS=6.056;HRun=4;HaplotypeScore=58.6150;InbreedingCoeff=0.9937;MQ=82.28;MQ0=0;MQRankSum=-4.297;QD=35.55;ReadPosRankSum=1.206;VQSLOD=5.3012;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:11,37:48:99:1615,120,0	1/1:1,11:12:33.11:444,33,0	0/0:20,0:20:45.59:0,46,505	0/0:16,0:16:11.86:0,12,398	1/1:4,21:25:54.18:729,54,0	1/1:1,19:20:57.19:775,57,0	1/1:1,14:15:36.12:493,36,0	1/1:5,19:24:57.18:764,57,0	1/1:3,17:20:54.18:738,54,0	1/1:1,16:17:51.17:697,51,0	1/1:1,19:21:51.10:669,51,0	0/0:28,0:28:81.21:0,81,909	0/0:19,0:19:51.14:0,51,578	1/1:2,18:20:51.17:694,51,0	1/1:0,28:28:81.23:1087,81,0	1/1:3,24:27:66.22:903,66,0	1/1:2,30:32:81.27:1108,81,0	1/1:0,17:17:51.17:698,51,0	1/1:2,22:24:66.21:888,66,0	1/1:4,20:24:57.19:779,57,0	1/1:4,29:32:93.30:1255,93,0	0/0:32,0:32:90.26:0,90,1019	0/0:15,0:15:45.13:0,45,510	0/0:30,0:30:81.19:0,81,891	1/1:5,9:14:36.11:476,36,0	1/1:1,26:27:78.26:1065,78,0	1/1:4,20:24:63.21:861,63,0	1/1:2,6:8:24.08:327,24,0
chr10	54523402	.	CT	C	15106.01	PASS	AB=0.923;AC=35;AF=0.625;AN=56;BaseQRankSum=13.976;DP=685;FS=1.666;HRun=3;HaplotypeScore=69.9670;InbreedingCoeff=0.9385;MQ=79.69;MQ0=0;MQRankSum=-3.677;QD=31.67;ReadPosRankSum=0.774;VQSLOD=4.9409;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,42:42:99:1339,108,0	0/0:9,0:9:27.09:0,27,389	0/0:17,0:17:48.13:0,48,641	0/0:19,0:19:50.28:0,50,741	1/1:0,22:22:51.16:631,51,0	1/1:0,22:22:63.20:781,63,0	1/1:3,18:21:54.17:670,54,0	1/1:1,33:34:99:1237,102,0	1/1:0,23:23:66.21:818,66,0	1/1:2,31:32:93.29:1151,93,0	1/1:0,19:19:51.16:632,51,0	0/0:37,0:37:99:0,111,1548	0/0:19,0:19:57.19:0,57,821	1/1:0,22:22:66.21:818,66,0	1/1:0,22:22:54.17:669,54,0	0/1:33,3:36:6.24:6,0,1277	0/0:36,0:36:99:0,105,1492	0/0:13,0:13:35.81:0,36,516	1/1:1,36:37:99:1300,105,0	1/1:1,27:28:75.24:929,75,0	1/1:0,31:31:90.28:1116,90,0	0/0:19,0:19:51.16:0,51,716	0/0:19,0:19:57.19:0,57,819	0/0:20,0:20:57.19:0,57,821	1/1:0,27:27:78.25:966,78,0	1/1:0,27:27:81.25:1003,81,0	1/1:1,19:20:50.87:631,51,0	1/1:0,11:11:33.10:408,33,0
chr10	54523723	.	GGCAAGGT	G	18100.31	PASS	AB=0.522;AC=23;AF=0.411;AN=56;BaseQRankSum=0.485;DP=744;FS=0.000;HRun=0;HaplotypeScore=255.9045;InbreedingCoeff=0.9261;MQ=83.97;MQ0=0;MQRankSum=-17.924;QD=64.19;ReadPosRankSum=0.793;VQSLOD=4.6232;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,134,3838	0/0:14,0:14:42.10:0,42,1136	0/0:32,0:32:93.11:0,93,3341	0/0:25,0:25:66.23:0,66,2098	1/1:1,21:22:51.13:1107,51,0	1/1:2,23:25:60.21:1540,60,0	1/1:2,23:25:60.21:1581,60,0	1/1:3,18:20:54.19:1334,54,0	0/1:2,22:24:32.93:1442,0,33	1/1:2,26:28:75.21:1907,75,0	1/1:1,18:19:54.19:1396,54,0	0/0:31,0:31:93.32:0,93,3601	0/0:40,0:40:99:0,117,4423	1/1:1,30:31:81.28:2026,81,0	1/1:2,37:39:96.33:2422,96,0	0/0:27,0:27:78.25:0,78,2292	0/0:28,0:28:72.25:0,72,2144	0/0:21,0:21:60.20:0,60,1712	0/0:21,0:21:63.22:0,63,1787	0/0:28,0:28:84.18:0,84,2343	0/0:43,0:43:99:0,114,3176	0/0:20,0:20:60.19:0,60,2269	0/0:21,0:21:63.22:0,63,2352	0/0:30,0:30:90.31:0,90,3612	1/1:0,14:14:30.10:749,30,0	1/1:1,23:24:69.24:1806,69,0	0/0:27,0:27:81.28:0,81,2433	1/1:0,10:10:30.10:791,30,0
chr10	54523726	.	A	AAGGT	18146.34	PASS	AB=0.958;AC=19;AF=0.339;AN=56;BaseQRankSum=-17.942;DP=751;FS=2.914;HRun=0;HaplotypeScore=213.6582;InbreedingCoeff=0.9209;MQ=82.58;MQ0=0;MQRankSum=3.514;QD=59.11;ReadPosRankSum=3.074;VQSLOD=5.8925;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,49:56:99:3426,129,0	1/1:3,12:15:39.13:1004,39,0	0/0:31,0:31:87.30:0,87,1572	0/0:23,0:23:45.15:0,45,824	0/0:21,0:21:43.04:0,43,323	0/0:23,0:23:57.07:0,57,531	0/0:23,0:23:60.07:0,60,559	0/0:18,0:18:41.86:0,42,390	0/1:22,1:23:19.96:20,0,469	0/0:26,0:26:68.99:0,69,641	0/0:18,0:18:51.01:0,51,475	0/0:33,0:33:93.26:0,93,1661	0/0:40,0:40:99:0,111,2044	0/0:30,0:30:77.27:0,77,691	0/0:37,0:37:92.37:0,92,830	1/1:2,25:27:72.25:1908,72,0	1/1:2,30:33:69.24:1831,69,0	1/1:2,19:21:57.20:1477,57,0	1/1:2,21:23:66.18:1596,66,0	1/1:7,24:33:81.14:2046,81,0	1/1:6,39:46:99:2764,105,0	0/0:23,0:23:60.18:0,60,1060	0/0:21,0:21:57.18:0,57,1033	0/0:30,0:30:90.31:0,90,1678	0/0:14,0:14:27.03:0,27,250	0/0:23,0:23:68.67:0,69,624	1/1:3,24:30:78.27:2074,78,0	0/0:10,0:10:30.03:0,30,278
chr10	54524074	.	TTCTC	T	3680.38	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=11.464;DP=669;FS=2.067;HRun=0;HaplotypeScore=115.9689;InbreedingCoeff=0.9994;MQ=74.19;MQ0=3;MQRankSum=-0.573;QD=41.82;ReadPosRankSum=-1.139;VQSLOD=3.9609;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,114,2995	0/0:16,0:16:48.14:0,48,1198	0/0:25,0:23:25.44:0,25,940	0/0:30,0:28:44.82:0,45,1212	0/0:29,0:29:75.23:0,75,1871	0/0:27,0:28:79.50:0,79,2071	0/0:19,0:19:34.90:0,35,1284	0/0:19,0:19:51.15:0,51,1204	0/0:25,0:25:72.20:0,72,1797	0/0:25,0:25:75.25:0,75,1944	0/0:21,0:21:63.22:0,63,1667	0/0:21,0:21:63.22:0,63,1699	0/0:17,0:17:51.18:0,51,1371	0/0:17,0:17:51.18:0,51,1348	0/0:25,0:25:75.21:0,75,1866	0/0:32,0:32:96.33:0,96,2595	0/0:36,0:36:99:0,105,2627	0/0:16,0:16:45.15:0,45,1197	1/1:2,19:20:48.07:773,48,0	1/1:0,22:22:65.98:1047,66,0	1/1:1,20:20:34.47:641,34,0	0/0:33,0:33:99:0,99,2584	0/0:25,0:25:72.25:0,72,1971	0/0:27,0:27:78.23:0,78,1974	0/0:19,0:19:48.14:0,48,1200	0/0:22,0:22:66.21:0,66,1699	1/1:0,24:24:63.22:1220,63,0	0/0:12,0:12:33.11:0,33,901
chr10	54524255	.	A	ATAC	7035.83	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-4.361;DP=738;FS=0.801;HRun=0;HaplotypeScore=128.7908;InbreedingCoeff=0.9857;MQ=74.62;MQ0=1;MQRankSum=-1.630;QD=50.98;ReadPosRankSum=4.453;VQSLOD=6.5443;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,50:52:99:2582,114,0	1/1:0,3:5:9.03:204,9,0	0/0:17,0:16:39.98:0,40,578	0/0:20,0:17:24.02:0,24,288	0/0:32,0:32:93.32:0,93,1531	0/0:23,0:23:63.21:0,63,1031	0/0:25,0:25:63.21:0,63,1031	0/0:33,0:33:90.30:0,90,1432	0/0:34,0:34:99:0,99,1603	0/0:34,0:34:99:0,99,1599	0/0:25,0:25:69.22:0,69,1106	0/0:31,0:31:87.30:0,87,1449	0/0:20,0:20:51.17:0,51,822	0/0:21,0:21:63.22:0,63,1049	0/0:29,0:29:84.29:0,84,1389	1/1:1,31:32:78.27:1765,78,0	1/1:2,34:37:81.27:1805,81,0	1/1:1,11:12:30.10:680,30,0	0/0:20,0:20:54.18:0,54,865	0/0:23,0:23:69.24:0,69,1141	0/0:30,0:30:81.25:0,81,1321	0/0:24,0:24:66.23:0,66,1089	0/0:25,0:25:75.23:0,75,1198	0/0:37,0:37:99:0,105,1739	0/0:21,0:21:54.18:0,54,899	0/0:42,0:42:99:0,120,1974	0/0:22,0:22:63.22:0,63,1040	0/0:12,0:12:33.11:0,33,550
chr10	54524419	.	C	CCT	5957.06	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=13.676;DP=666;FS=0.000;HRun=0;HaplotypeScore=85.3101;InbreedingCoeff=0.9998;MQ=66.60;MQ0=0;MQRankSum=-1.477;QD=50.06;ReadPosRankSum=2.952;VQSLOD=5.5083;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,33:37:99:1960,105,0	1/1:0,10:11:30.10:558,30,0	0/0:30,0:29:87.23:0,87,1237	0/0:14,0:13:36.12:0,36,541	0/0:31,0:31:90.29:0,90,1354	0/0:23,0:23:69.22:0,69,1035	0/0:32,0:32:93.26:0,93,1377	0/0:30,0:30:87.29:0,87,1313	0/0:34,0:34:99:0,102,1558	0/0:20,0:20:57.19:0,57,867	0/0:17,0:17:51.17:0,51,781	0/0:19,0:19:57.19:0,57,873	0/0:20,0:20:51.17:0,51,781	0/0:20,0:20:60.20:0,60,900	0/0:23,0:23:69.23:0,69,1057	1/1:2,26:28:72.25:1374,72,0	1/1:1,23:24:66.23:1255,66,0	1/1:0,19:19:42.14:810,42,0	0/0:20,0:20:60.17:0,60,894	0/0:22,0:22:60.20:0,60,911	0/0:31,0:31:90.29:0,90,1357	0/0:26,0:26:78.23:0,78,1133	0/0:26,0:26:75.25:0,75,1144	0/0:15,0:15:45.14:0,45,669	0/0:23,0:23:69.22:0,69,1018	0/0:35,0:35:99:0,102,1522	0/0:23,0:22:66.22:0,66,1003	0/0:13,0:13:39.10:0,39,572
chr10	54524764	.	T	TA	8786.07	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-9.317;DP=381;FS=3.334;HRun=5;HaplotypeScore=51.6595;InbreedingCoeff=0.9088;MQ=66.32;MQ0=1;MQRankSum=0.346;QD=33.79;ReadPosRankSum=1.250;VQSLOD=5.3076;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,3:9:21.07:271,21,0	1/1:2,1:3:9.03:118,9,0	0/0:12,0:10:12.56:0,13,84	0/0:7,0:4:5.66:0,6,33	1/1:0,18:18:45.08:568,45,0	1/1:2,15:17:45.15:591,45,0	1/1:1,11:12:27.09:355,27,0	1/1:5,30:35:90.25:1136,90,0	1/1:2,6:8:18.06:237,18,0	1/1:0,20:20:60.20:790,60,0	1/1:0,19:19:48.16:631,48,0	0/0:11,0:11:30.06:0,30,314	0/0:12,0:12:33.08:0,33,354	1/1:0,4:4:12.04:158,12,0	1/1:1,7:8:15.05:197,15,0	1/1:9,4:13:36.12:473,36,0	1/1:26,7:33:90.29:1171,90,0	1/1:10,7:17:44.80:590,45,0	0/0:18,0:18:51.12:0,51,542	0/0:21,0:21:54.13:0,54,580	0/0:2,0:2:6.02:0,6,64	0/0:3,0:3:9.02:0,9,97	0/0:9,0:9:21.04:0,21,217	0/0:1,0:1:3.01:0,3,32	1/1:0,15:15:36.12:474,36,0	1/1:3,22:25:66.21:868,66,0	0/0:24,0:23:63.12:0,63,654	1/1:0,4:4:12.04:158,12,0
chr10	54524776	.	TA	T	3793.18	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=0.179;DP=382;FS=0.000;HRun=8;HaplotypeScore=73.8671;InbreedingCoeff=0.9182;MQ=69.82;MQ0=1;MQRankSum=-2.496;QD=25.12;ReadPosRankSum=1.239;VQSLOD=4.3092;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,3:13:32.95:292,33,0	1/1:2,1:3:9.01:87,9,0	0/0:16,0:13:20.45:0,20,160	0/0:5,0:2:6.01:0,6,59	0/0:18,0:18:51.16:0,51,616	0/0:17,0:17:51.15:0,51,611	0/0:11,0:11:27.07:0,27,314	0/0:30,0:30:72.19:0,72,840	0/0:8,0:8:21.04:0,21,231	0/0:23,0:23:54.15:0,54,628	0/0:18,0:19:53.99:0,54,614	0/0:8,0:8:24.07:0,24,290	0/0:11,0:11:33.10:0,33,399	0/0:4,0:4:8.99:0,9,92	0/0:5,0:5:15.04:0,15,171	1/1:11,3:14:39.04:365,39,0	1/1:24,8:32:84.10:796,84,0	1/1:17,4:21:50.93:467,51,0	1/1:2,17:19:51.04:484,51,0	1/1:1,21:22:63:587,63,0	1/1:0,3:3:9.01:87,9,0	0/0:5,0:5:12.02:0,12,133	0/0:9,0:9:27.08:0,27,326	0/0:2,0:2:3.01:0,3,36	0/0:13,0:13:36.11:0,36,435	0/0:21,0:21:60.18:0,60,716	1/1:1,23:24:66.08:629,66,0	0/0:6,0:6:15.03:0,15,170
chr10	54526788	.	AG	A	3023.66	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=14.271;DP=628;FS=0.898;HRun=2;HaplotypeScore=82.7799;InbreedingCoeff=0.9833;MQ=71.21;MQ0=0;MQRankSum=-4.000;QD=29.94;ReadPosRankSum=2.101;VQSLOD=3.3823;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,150,2186	0/0:3,0:3:9.03:0,9,135	0/0:18,0:16:48.16:0,48,681	0/0:28,0:28:55.83:0,56,1020	0/0:17,0:17:51.16:0,51,743	0/0:22,0:22:66.21:0,66,966	0/0:23,0:23:63.21:0,63,942	0/0:36,0:36:99:0,102,1489	0/0:11,0:11:33.09:0,33,473	0/0:14,0:14:42.11:0,42,575	0/0:14,0:14:39.13:0,39,584	0/0:28,0:28:84.27:0,84,1240	0/0:15,0:15:45.14:0,45,655	0/0:25,0:25:69.23:0,69,1032	0/0:20,0:20:60.20:0,60,897	0/0:17,0:17:45.14:0,45,649	0/0:40,0:40:99:0,117,1703	0/0:32,0:32:96.32:0,96,1420	1/1:2,16:17:45.15:584,45,0	1/1:3,20:23:60.15:744,60,0	1/1:3,40:43:99:1272,99,0	0/0:29,0:29:87.21:0,87,1246	0/0:15,0:15:42.12:0,42,605	0/0:30,0:30:84.27:0,84,1238	0/0:13,0:13:39.13:0,39,584	0/0:17,0:17:48.16:0,48,718	1/1:0,17:17:45.15:584,45,0	0/0:8,0:8:24.08:0,24,360
chr10	54527209	.	A	AG	2112.11	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=7.667;DP=521;FS=0.000;HRun=4;HaplotypeScore=78.0237;InbreedingCoeff=0.9730;MQ=78.07;MQ0=2;MQRankSum=-0.534;QD=30.61;ReadPosRankSum=-0.973;VQSLOD=3.2959;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:72.19:0,72,806	0/0:4,0:4:12.03:0,12,136	0/0:31,0:28:59.53:0,60,607	0/0:32,0:31:61.05:0,61,629	0/0:13,0:13:39.11:0,39,442	0/0:18,0:18:51.15:0,51,578	0/0:20,0:20:36.10:0,36,408	0/0:20,0:20:57.16:0,57,647	0/0:16,0:16:48.14:0,48,544	0/0:23,0:23:57.16:0,57,640	0/0:12,0:12:36.10:0,36,408	0/0:27,0:27:81.23:0,81,918	0/0:14,0:14:42.12:0,42,476	0/0:20,0:20:57.15:0,57,637	0/0:17,0:17:45.13:0,45,511	0/0:8,0:8:24.07:0,24,272	0/0:15,0:15:9.01:0,9,91	0/0:20,0:20:24.07:0,24,272	1/1:1,15:16:45.13:591,45,0	1/1:2,17:19:45.15:615,45,0	1/1:1,13:14:33.11:451,33,0	0/0:20,0:20:51.12:0,51,560	0/0:22,0:22:63.18:0,63,713	0/0:31,0:31:84.17:0,84,925	0/0:19,0:19:30.09:0,30,340	0/0:15,0:15:45.13:0,45,510	1/1:3,17:19:45.15:615,45,0	0/0:7,0:7:21.06:0,21,238
chr10	54527571	.	ACAATG	A	19646.45	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=15.546;DP=630;FS=5.786;HRun=0;HaplotypeScore=157.9465;InbreedingCoeff=0.9553;MQ=85.62;MQ0=0;MQRankSum=-16.028;QD=45.69;ReadPosRankSum=2.413;VQSLOD=4.9498;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,38:48:93.32:1879,93,0	1/1:3,3:6:12.04:243,12,0	0/0:31,0:31:78.27:0,78,2270	0/0:22,0:22:54.10:0,54,1343	1/1:2,14:16:27.09:547,27,0	1/1:2,17:19:45.15:913,45,0	1/1:5,21:26:60.21:1217,60,0	1/1:3,18:21:57.14:1080,57,0	1/1:3,20:23:51.18:1035,51,0	1/1:4,20:24:57.20:1157,57,0	1/1:1,3:4:6.02:113,6,0	0/0:49,0:49:99:0,138,4090	0/0:32,0:32:84.29:0,84,2522	1/1:5,13:18:33.11:670,33,0	1/1:2,27:30:78.27:1559,78,0	1/1:2,28:30:78.27:1560,78,0	1/1:4,21:25:45.59:889,46,0	1/1:2,12:14:36.12:731,36,0	1/1:2,11:13:33.10:635,33,0	1/1:2,9:11:18.06:365,18,0	1/1:3,55:58:99:2741,135,0	0/0:19,0:19:51.18:0,51,1546	0/0:16,0:16:36.12:0,36,1089	0/0:31,0:31:93.32:0,93,2786	1/1:2,11:13:27.09:548,27,0	1/1:2,14:16:42.14:852,42,0	1/1:1,12:13:39.13:792,39,0	1/1:0,2:2:6.02:122,6,0
chr10	54527931	.	CT	C	2011.94	PASS	AB=0.679;AC=23;AF=0.411;AN=56;BaseQRankSum=11.979;DP=330;FS=10.261;HRun=2;HaplotypeScore=98.3580;InbreedingCoeff=-0.4907;MQ=49.60;MQ0=0;MQRankSum=-4.608;QD=6.55;ReadPosRankSum=6.241;VQSLOD=-0.0342;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:9,13:22:81.65:170,0,82	0/1:2,7:9:15.25:108,0,15	0/0:4,0:4:12.02:0,12,145	0/0:3,0:3:0:0,0,0	0/1:8,15:23:89.85:100,0,90	0/1:4,8:12:63.15:81,0,63	0/1:3,1:4:2.80:3,0,60	0/1:7,4:11:35.83:36,0,106	0/1:3,4:7:6.28:62,0,6	0/1:8,14:22:74.21:193,0,74	0/1:5,13:18:15.13:141,0,15	0/1:11,0:11:25.40:25,0,100	0/0:8,0:8:23.27:0,23,132	1/1:3,7:10:10.21:111,10,0	0/1:10,8:18:62.49:62,0,142	0/1:3,6:9:3.24:111,0,3	0/1:6,8:14:33.39:130,0,33	0/1:8,12:20:51.63:194,0,52	0/1:5,4:9:20.10:48,0,20	0/1:5,19:24:16.04:228,0,16	0/1:2,1:3:7.82:8,0,20	0/0:4,0:4:8.76:0,9,53	0/1:9,0:9:2.64:3,0,91	0/0:3,0:3:8.65:0,9,46	0/1:8,14:22:69.14:168,0,69	0/1:8,6:14:61.65:62,0,103	0/1:7,9:16:63.91:116,0,64	0/0:1,0:1:0.89:0,1,2
chr10	54527934	.	AATTAATT	A	6495.41	PASS	AB=0.671;AC=17;AF=0.315;AN=54;BaseQRankSum=6.410;DP=313;FS=13.639;HRun=0;HaplotypeScore=119.0140;InbreedingCoeff=-0.2087;MQ=45.47;MQ0=0;MQRankSum=-7.895;QD=31.84;ReadPosRankSum=5.854;VQSLOD=3.3567;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:22:58.91:0,59,498	0/0:2,0:9:26.60:0,27,175	0/0:2,0:2:5.99:0,6,58	./.	0/1:6,15:21:44.70:588,0,45	0/1:4,8:12:46.50:415,0,46	0/1:3,1:4:44.65:45,0,48	0/1:7,4:11:85.54:204,0,86	0/1:2,4:6:4.87:211,0,5	0/1:8,14:22:49.37:818,0,49	0/1:3,13:16:22.07:678,0,22	0/0:10,0:10:25.83:0,26,729	0/0:8,0:8:23.91:0,24,783	1/1:2,7:9:5.18:382,5,0	0/1:9,8:17:99:296,0,112	0/0:2,0:8:23.84:0,24,226	0/0:6,0:14:38.01:0,38,317	0/0:8,0:20:52.59:0,53,452	0/1:5,4:9:12.20:216,0,12	0/1:6,19:25:4.21:1056,0,4	0/1:2,1:3:18.88:48,0,19	0/0:4,0:4:8.70:0,9,149	0/0:8,0:8:19.69:0,20,297	0/0:3,0:3:8.55:0,9,109	0/1:6,14:20:52.68:753,0,53	0/1:7,6:13:81.47:312,0,81	0/1:6,9:15:46.78:475,0,47	0/1:1,0:1:0:0,0,0
chr10	54527938	.	AATT	A	3605.96	PASS	AB=0.993;AC=24;AF=0.462;AN=52;BaseQRankSum=13.463;DP=305;FS=5.789;HRun=0;HaplotypeScore=103.1236;InbreedingCoeff=-0.4610;MQ=43.65;MQ0=0;MQRankSum=-3.409;QD=13.21;ReadPosRankSum=8.782;VQSLOD=2.1099;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:20,0:20:85.95:86,0,170	0/1:8,0:8:14.42:60,0,14	./.	./.	0/1:22,0:22:99:279,0,130	0/1:12,0:12:92.14:193,0,92	0/1:4,0:4:19.84:20,0,49	0/1:11,0:11:99:119,0,153	0/1:5,0:5:21.70:100,0,22	0/1:22,0:22:99:396,0,116	1/1:16,0:16:5.74:329,6,0	0/0:10,0:10:30.10:0,30,558	0/0:9,0:9:27.09:0,27,536	1/1:8,0:8:21.04:206,21,0	0/1:16,0:16:99:171,0,159	0/1:10,0:10:41.86:42,0,116	0/1:14,0:14:55.58:56,0,124	0/1:18,0:18:75.59:76,0,203	0/1:10,0:10:50.66:128,0,51	0/1:22,4:26:37.87:531,0,38	0/1:3,0:3:20.05:20,0,34	0/0:4,0:4:9.03:0,9,143	0/0:5,0:5:12.03:0,12,203	0/0:2,0:2:6.02:0,6,95	0/1:20,0:20:53.59:395,0,54	0/1:13,0:13:99:152,0,116	0/1:14,0:14:99:224,0,123	1/1:1,0:1:2.99:24,3,0
chr10	54529058	.	AT	A	14738.30	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=18.673;DP=659;FS=0.926;HRun=1;HaplotypeScore=100.7719;InbreedingCoeff=0.9935;MQ=82.83;MQ0=0;MQRankSum=-3.173;QD=38.18;ReadPosRankSum=0.638;VQSLOD=4.9378;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,123,1966	0/0:12,0:12:36.12:0,36,576	0/0:18,0:18:54.18:0,54,845	0/0:18,0:18:10.15:0,10,604	1/1:0,21:21:51.17:712,51,0	1/1:0,27:27:75.25:1039,75,0	1/1:0,24:24:66.22:923,66,0	1/1:0,25:25:75.22:999,75,0	1/1:0,23:23:63.21:881,63,0	1/1:0,14:14:42.14:584,42,0	1/1:0,12:12:33.11:459,33,0	0/0:33,0:33:96.33:0,96,1525	0/0:24,0:24:72.20:0,72,1096	1/1:0,24:24:69.23:954,69,0	1/1:0,22:22:51.16:703,51,0	0/0:23,0:23:69.20:0,69,1054	0/0:31,0:31:93.32:0,93,1486	0/0:14,0:14:42.14:0,42,666	1/1:0,24:24:72.23:990,72,0	1/1:0,21:21:54.18:745,54,0	1/1:0,70:70:99:2558,184,0	0/0:17,0:17:51.16:0,51,792	0/0:17,0:17:51.16:0,51,792	0/0:24,0:24:72.19:0,72,1092	1/1:0,24:24:69.23:965,69,0	1/1:0,30:30:90.27:1238,90,0	1/1:0,13:13:36.12:503,36,0	1/1:0,12:12:36.12:485,36,0
chr10	54529552	.	GT	G	3666.62	PASS	AB=1.000;AC=43;AF=0.768;AN=56;BaseQRankSum=11.530;DP=539;FS=2.683;HRun=3;HaplotypeScore=228.9782;InbreedingCoeff=0.8973;MQ=64.68;MQ0=6;MQRankSum=-9.953;QD=8.88;ReadPosRankSum=6.011;VQSLOD=1.2780;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:39,0:38:40.43:262,40,0	1/1:6,2:8:17.52:141,18,0	0/0:38,0:17:31.36:0,31,250	0/1:25,0:16:4.26:4,0,95	1/1:22,0:22:40.55:182,41,0	1/1:18,0:18:29.33:125,29,0	1/1:22,0:22:45.25:187,45,0	1/1:18,0:18:45.86:269,46,0	1/1:21,0:21:45.48:196,45,0	1/1:20,0:20:40.41:180,40,0	1/1:19,0:19:36.75:154,37,0	0/0:13,0:13:35.92:0,36,373	0/0:12,0:12:30.86:0,31,281	1/1:11,0:11:26.70:115,27,0	1/1:22,0:22:40.18:172,40,0	1/1:15,2:17:43.39:315,43,0	1/1:22,0:22:46.41:328,46,0	1/1:20,0:19:18.25:131,18,0	1/1:4,0:4:8.51:48,9,0	1/1:23,0:23:43.25:195,43,0	1/1:14,0:14:16.10:72,16,0	0/0:22,0:22:52.94:0,53,501	0/0:20,0:20:44.66:0,45,416	0/0:20,0:20:54.45:0,54,529	1/1:19,0:19:22.06:109,22,0	1/1:24,0:24:59.22:259,59,0	1/1:22,0:22:47.42:190,47,0	1/1:3,0:3:7.95:31,8,0
chr10	54529553	.	TTTAAAAAAAAAA	T	22610.10	PASS	AB=0.950;AC=33;AF=0.589;AN=56;BaseQRankSum=16.281;DP=530;FS=4.440;HRun=0;HaplotypeScore=243.9809;InbreedingCoeff=0.9065;MQ=67.04;MQ0=6;MQRankSum=-14.510;QD=79.33;ReadPosRankSum=10.413;VQSLOD=3.5272;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:37:54.14:0,54,1996	0/0:6,0:6:18.06:0,18,839	0/0:42,0:19:50.95:0,51,1530	0/0:25,0:16:31.62:0,32,676	1/1:0,21:21:45.10:1645,45,0	1/1:0,16:16:33.11:1262,33,0	1/1:0,21:21:51.18:1986,51,0	1/1:0,16:16:48.16:1087,48,0	1/1:0,20:20:51.18:1962,51,0	1/1:0,18:18:48.16:1656,48,0	1/1:0,18:18:42.14:1558,42,0	0/0:13,0:13:39.12:0,39,1714	0/0:13,0:13:39.13:0,39,1925	1/1:0,11:11:30.10:1161,30,0	1/1:0,20:20:45.15:1729,45,0	0/1:18,1:19:70.98:71,0,2041	0/0:25,0:25:65.78:0,66,3156	0/0:21,0:20:19.48:0,19,856	1/1:0,3:3:9.03:197,9,0	1/1:0,22:22:48.16:1799,48,0	1/1:0,14:14:18.06:677,18,0	0/0:21,0:21:63.22:0,63,3016	0/0:20,0:20:57.18:0,57,2373	0/0:21,0:21:59.73:0,60,2880	1/1:0,17:17:24.08:902,24,0	1/1:0,24:24:69.24:2465,69,0	1/1:0,22:22:54.19:2103,54,0	1/1:0,3:3:9.03:350,9,0
chr10	54529554	.	T	TAA	251.97	PASS	AB=0.832;AC=5;AF=0.089;AN=56;BaseQRankSum=-3.604;DP=544;FS=2.325;HRun=0;HaplotypeScore=248.0700;InbreedingCoeff=-0.0022;MQ=66.21;MQ0=6;MQRankSum=5.557;QD=2.10;ReadPosRankSum=-3.388;VQSLOD=2.2850;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:12,25:43:34.90:118,0,35	0/1:4,0:6:18.42:18,0,24	0/0:43,0:19:42.10:0,42,436	0/0:23,0:15:20.55:0,21,202	0/0:21,0:21:34.33:0,34,164	0/0:16,0:16:28.88:0,29,140	0/0:21,0:21:48.29:0,48,235	0/0:16,0:16:19.45:0,19,74	0/0:20,0:20:45.92:0,46,223	0/0:18,0:18:36.92:0,37,179	0/0:18,0:18:22.79:0,23,152	0/0:15,0:15:37:0,37,541	0/0:13,0:13:38.96:0,39,495	0/0:11,0:11:26.45:0,26,126	0/0:20,0:20:40.24:0,40,195	0/1:16,0:19:6.98:81,0,7	0/1:24,0:26:20.74:112,0,21	0/1:24,0:25:9.88:39,0,10	0/0:3,0:3:4.20:0,4,16	0/0:22,0:22:38.34:0,38,184	0/0:14,0:14:14.68:0,15,70	0/0:21,0:21:63.16:0,63,909	0/0:22,0:22:47.41:0,47,714	0/0:20,0:20:57.19:0,57,916	0/0:17,0:17:17.99:0,18,85	0/0:24,0:24:56.16:0,56,268	0/0:22,0:22:51.13:0,51,249	0/0:3,0:3:8.52:0,9,42
chr10	54529968	.	T	TA	10872.43	PASS	AB=0.929;AC=33;AF=0.589;AN=56;BaseQRankSum=18.544;DP=616;FS=9.411;HRun=4;HaplotypeScore=179.5450;InbreedingCoeff=0.9513;MQ=72.91;MQ0=0;MQRankSum=-16.609;QD=30.98;ReadPosRankSum=-1.003;VQSLOD=2.2465;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,117,1312	0/1:12,1:13:1.80:2,0,365	0/0:22,0:22:19.34:0,19,389	0/0:12,0:13:26.47:0,26,252	1/1:1,19:21:45.09:582,45,0	1/1:1,26:27:75.21:1002,75,0	1/1:3,15:18:47.52:622,48,0	1/1:7,13:20:30.06:388,30,0	1/1:5,20:25:63.12:818,63,0	1/1:7,11:18:39.09:508,39,0	1/1:0,12:12:30.10:409,30,0	0/0:24,0:24:69.20:0,69,783	0/0:18,0:18:54.14:0,54,602	1/1:3,17:20:14.08:559,14,0	1/1:3,17:20:48.07:613,48,0	0/0:25,0:25:75.20:0,75,841	0/0:34,0:34:90.23:0,90,1009	0/0:18,0:18:48.14:0,48,544	1/1:7,14:21:48.12:635,48,0	1/1:2,28:30:81.23:1104,81,0	1/1:2,8:10:21.07:277,21,0	0/0:29,0:29:78.21:0,78,875	0/0:25,0:25:72.20:0,72,815	0/0:17,0:17:48.14:0,48,544	1/1:3,19:22:60.11:776,60,0	1/1:5,31:36:87.28:1185,87,0	1/1:3,23:25:66.22:901,66,0	1/1:0,12:12:36.12:492,36,0
chr10	54530004	.	G	GTA	1352.24	PASS	AB=0.816;AC=13;AF=0.232;AN=56;BaseQRankSum=11.343;DP=485;FS=6.090;HRun=0;HaplotypeScore=205.3128;InbreedingCoeff=-0.0620;MQ=78.52;MQ0=0;MQRankSum=-8.880;QD=7.19;ReadPosRankSum=3.989;VQSLOD=2.6484;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:87.28:0,87,1393	0/0:7,0:7:21.07:0,21,330	0/0:20,0:20:47.08:0,47,766	0/0:19,0:19:54.09:0,54,757	1/1:15,4:19:15.03:160,15,0	0/1:16,5:21:99:127,0,234	0/0:8,0:8:3:0,3,26	0/0:23,0:23:68.75:0,69,540	0/1:9,10:19:83.29:326,0,83	0/1:11,1:12:17.15:17,0,184	0/1:10,2:12:18.83:58,0,19	0/0:20,0:20:60.19:0,60,951	0/0:16,0:16:48.16:0,48,779	0/1:14,6:20:70.76:201,0,71	0/1:14,6:20:96.09:177,0,96	0/0:19,0:19:57.19:0,57,930	0/0:30,0:30:90.31:0,90,1468	0/0:16,0:16:48.16:0,48,783	0/1:8,2:10:44.03:44,0,155	0/1:9,6:15:28.11:186,0,28	0/1:7,0:7:0:0,0,0	0/0:29,0:29:81.25:0,81,1263	0/0:31,0:31:93.30:0,93,1485	0/0:18,0:18:48.14:0,48,750	0/1:12,4:16:58.61:119,0,59	0/1:14,3:17:90.86:91,0,205	0/0:9,1:10:14.98:0,15,123	0/0:2,0:2:5.99:0,6,50
chr10	54530005	.	G	GTATTCAAAGTTATGATGCCAGT	41649.71	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=17.814;DP=498;FS=9.640;HRun=0;HaplotypeScore=375.3325;InbreedingCoeff=0.9690;MQ=75.99;MQ0=0;MQRankSum=-17.946;QD=170.70;ReadPosRankSum=2.563;VQSLOD=4.0630;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:87.27:0,87,4445	0/0:7,0:7:21.05:0,21,958	0/0:20,0:20:60.12:0,60,2385	0/0:17,0:17:51.12:0,51,2103	1/1:14,4:18:39.13:2388,39,0	1/1:16,5:21:54.19:4088,54,0	1/1:8,0:8:21.07:1328,21,0	1/1:26,0:26:69.03:2997,69,0	1/1:9,10:19:39.56:4548,40,0	1/1:12,1:13:36.12:2366,36,0	1/1:10,2:12:33.11:2726,33,0	0/0:19,0:19:57.20:0,57,2846	0/0:17,0:17:48.14:0,48,2295	1/1:14,6:20:22.39:4053,22,0	1/1:14,6:20:54.12:4207,54,0	0/0:19,0:19:57.20:0,57,2820	0/0:30,0:30:90.31:0,90,5251	0/0:16,0:16:48.16:0,48,2765	1/1:10,2:12:35.98:1704,36,0	1/1:11,6:17:42.14:3315,42,0	1/1:8,0:8:6.02:457,6,0	0/0:30,0:30:84.24:0,84,4253	0/0:32,0:32:90.28:0,90,5013	0/0:18,0:18:54.11:0,54,2463	1/1:13,4:17:30.10:2690,30,0	1/1:18,3:21:42.85:2997,43,0	1/1:9,1:10:24.08:1443,24,0	1/1:2,0:2:6.02:343,6,0
chr10	54530207	.	AG	A	19190.73	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=10.430;DP=647;FS=8.481;HRun=1;HaplotypeScore=91.6340;InbreedingCoeff=0.9997;MQ=81.91;MQ0=0;MQRankSum=-6.038;QD=39.65;ReadPosRankSum=2.910;VQSLOD=5.0868;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,34:36:99:1343,99,0	1/1:0,13:13:39.13:544,39,0	0/0:24,0:24:51.95:0,52,988	0/0:19,0:19:54.16:0,54,786	1/1:0,24:24:72.24:1006,72,0	1/1:0,19:19:57.19:797,57,0	1/1:0,17:17:48.16:671,48,0	1/1:0,32:32:90.27:1236,90,0	1/1:0,21:21:63.21:881,63,0	1/1:0,18:18:48.16:660,48,0	1/1:0,10:10:27.09:377,27,0	0/0:22,0:22:66.22:0,66,1040	0/0:17,0:17:51.17:0,51,815	1/1:0,23:23:69.23:964,69,0	1/1:0,31:31:90.30:1257,90,0	1/1:0,18:18:54.18:755,54,0	1/1:0,28:28:84.28:1173,84,0	1/1:1,17:18:54.18:755,54,0	1/1:0,27:27:81.27:1132,81,0	1/1:0,32:32:87.29:1216,87,0	1/1:0,26:26:63.21:881,63,0	0/0:23,0:23:69.24:0,69,1099	0/0:29,0:29:84.29:0,84,1343	0/0:29,0:29:87.30:0,87,1385	1/1:0,22:22:57.19:797,57,0	1/1:0,32:32:93.28:1277,93,0	1/1:0,27:27:75.25:1048,75,0	1/1:0,10:10:30.10:419,30,0
chr10	54530271	.	ACTCTCTC	A	6396.88	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=8.863;DP=612;FS=4.565;HRun=0;HaplotypeScore=191.0742;InbreedingCoeff=0.9995;MQ=80.87;MQ0=0;MQRankSum=-13.594;QD=60.92;ReadPosRankSum=2.838;VQSLOD=4.9505;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,34:39:93.32:2225,93,0	1/1:0,10:10:30.10:766,30,0	0/0:28,0:28:81.28:0,81,3004	0/0:21,0:21:63.16:0,63,1896	0/0:25,0:25:66.23:0,66,2603	0/0:20,0:20:60.21:0,60,2421	0/0:17,0:17:51.16:0,51,1943	0/0:32,0:32:93.30:0,93,3405	0/0:18,0:18:51.18:0,51,1981	0/0:18,0:18:48.12:0,48,1797	0/0:12,0:12:33.11:0,33,1311	0/0:31,0:31:90.31:0,90,3587	0/0:18,0:18:51.18:0,51,1946	0/0:25,0:25:75.26:0,75,2889	0/0:30,0:30:87.30:0,87,3192	1/1:0,9:9:27.09:689,27,0	1/1:5,27:32:67.77:1746,68,0	1/1:3,12:15:39.13:971,39,0	0/0:23,0:23:69.21:0,69,2590	0/0:24,0:24:72.25:0,72,2814	0/0:28,0:28:78.27:0,78,2978	0/0:15,0:15:45.15:0,45,1686	0/0:15,0:15:45.15:0,45,1811	0/0:34,0:34:99:0,102,4043	0/0:14,0:14:42.10:0,42,1582	0/0:25,0:25:75.26:0,75,2893	0/0:18,0:18:48.16:0,48,1868	0/0:15,0:15:42.14:0,42,1348
chr10	54531523	.	AC	A	1247.77	PASS	AB=0.968;AC=26;AF=0.481;AN=54;BaseQRankSum=12.305;DP=442;FS=3.870;HRun=1;HaplotypeScore=103.5341;InbreedingCoeff=-0.0409;MQ=52.78;MQ0=12;MQRankSum=-2.207;QD=4.29;ReadPosRankSum=6.050;VQSLOD=0.6931;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:28:4.90:94,0,5	./.	0/0:23,1:4:5.95:0,6,66	0/0:29,0:14:16.71:0,17,289	0/1:6,1:7:33.66:34,0,35	0/1:12,1:13:42.36:104,0,42	0/1:11,1:12:20.67:21,0,68	0/1:23,0:21:19.28:19,0,130	0/1:13,0:13:23.10:80,0,23	0/1:12,0:9:40.92:67,0,41	0/1:13,2:13:10.72:100,0,11	0/0:28,0:28:75.31:0,75,845	0/0:16,0:16:44.74:0,45,501	1/1:12,0:12:18.08:111,18,0	0/1:8,0:8:12.14:12,0,16	0/1:14,0:14:7.32:7,0,56	1/1:25,1:25:1.13:105,1,0	1/1:27,0:27:35.34:165,35,0	0/1:15,1:15:44.96:54,0,45	0/1:16,0:15:22.18:62,0,22	0/1:8,0:8:1.94:2,0,18	0/0:19,0:19:53.30:0,53,554	0/0:14,0:13:36.06:0,36,429	0/0:20,1:20:38.84:0,39,573	1/1:4,1:4:11.61:89,12,0	0/1:13,0:12:18.09:18,0,37	1/1:15,1:16:31.88:191,32,0	1/1:5,1:6:4.76:84,5,0
chr10	54531524	.	CA	C	4998.57	PASS	AB=0.676;AC=39;AF=0.722;AN=54;BaseQRankSum=5.399;DP=455;FS=8.816;HRun=9;HaplotypeScore=101.4017;InbreedingCoeff=0.8586;MQ=51.25;MQ0=12;MQRankSum=-0.384;QD=16.39;ReadPosRankSum=2.408;VQSLOD=4.3843;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,23:28:69.30:638,69,0	./.	0/0:22,1:4:8.10:0,8,57	0/0:29,0:14:24.07:0,24,233	1/1:5,2:7:9:80,9,0	1/1:7,6:13:26.97:236,27,0	1/1:8,4:12:14.95:129,15,0	0/1:13,12:23:18.18:256,0,18	1/1:8,6:14:21.64:214,22,0	1/1:12,3:12:17.66:151,18,0	1/1:10,7:15:32.73:281,33,0	0/0:27,0:27:69.11:0,69,756	0/0:16,0:16:39.11:0,39,448	1/1:9,3:12:21.94:152,22,0	1/1:5,4:9:12:110,12,0	1/1:3,11:14:27.01:247,27,0	1/1:6,22:27:65.98:595,66,0	1/1:3,26:28:67.86:626,68,0	1/1:4,11:14:32.97:284,33,0	1/1:10,7:16:29.17:236,29,0	1/1:4,4:8:8.62:82,9,0	0/0:19,0:19:51.07:0,51,558	0/0:15,0:14:33.07:0,33,361	0/0:21,0:20:50.59:0,51,532	1/1:4,2:5:14.97:125,15,0	1/1:3,10:12:26.99:243,27,0	1/1:10,7:17:25.75:181,26,0	1/1:3,3:6:15:134,15,0
chr10	54531534	.	CCAACAA	C	5187.81	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=5.940;DP=468;FS=7.717;HRun=0;HaplotypeScore=140.7008;InbreedingCoeff=0.9355;MQ=51.12;MQ0=13;MQRankSum=-8.918;QD=23.91;ReadPosRankSum=-2.426;VQSLOD=3.7953;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:81.09:0,81,1947	0/0:3,0:3:9.03:0,9,270	0/0:26,0:5:6.68:0,7,42	0/0:28,0:12:15.29:0,15,223	1/1:9,0:9:9.42:113,9,0	1/1:14,0:14:33.02:365,33,0	1/1:10,0:10:12.02:146,12,0	1/1:25,0:23:5.86:437,6,0	1/1:13,0:13:23.97:240,24,0	1/1:14,0:12:29.12:239,29,0	1/1:19,0:17:38.67:349,39,0	0/0:23,0:23:54.17:0,54,1269	0/0:14,0:14:35.33:0,35,804	1/1:12,0:12:13.11:183,13,0	1/1:13,0:13:11.79:111,12,0	0/0:11,0:10:27.09:0,27,577	0/0:33,0:32:93.07:0,93,2366	0/0:29,0:28:69.69:0,70,1786	1/1:11,5:15:39.13:710,39,0	1/1:8,9:16:36.09:615,36,0	1/1:10,0:10:17.97:299,18,0	0/0:19,0:19:48.15:0,48,1250	0/0:14,0:13:36.11:0,36,843	0/0:22,0:21:51.14:0,51,1297	1/1:7,0:6:14.06:174,14,0	1/1:16,0:15:29.96:327,30,0	1/1:16,1:17:45.14:738,45,0	1/1:5,0:5:14.96:139,15,0
chr10	54531537	.	ACAAC	A	2625.86	PASS	AB=0.875;AC=21;AF=0.375;AN=56;BaseQRankSum=11.290;DP=467;FS=28.805;HRun=0;HaplotypeScore=132.7311;InbreedingCoeff=0.2490;MQ=51.82;MQ0=9;MQRankSum=-8.768;QD=11.22;ReadPosRankSum=1.334;VQSLOD=1.6234;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:84.21:0,84,1926	0/0:3,0:3:9.03:0,9,260	0/1:25,0:6:0.49:0,0,76	0/0:27,0:13:26.53:0,27,425	1/1:3,6:10:20.81:176,21,0	1/1:8,7:16:9.24:215,9,0	0/1:9,0:10:11.40:64,0,11	0/1:23,1:25:73.15:175,0,73	0/1:15,0:16:1.35:179,0,1	1/1:10,2:12:8.20:271,8,0	0/1:15,3:17:12.97:302,0,13	0/0:21,0:21:57.16:0,57,1256	0/0:14,0:14:39.12:0,39,884	0/1:4,7:11:5.56:161,0,6	0/0:13,0:13:5.25:0,5,52	0/0:10,0:9:27.09:0,27,675	0/0:34,0:33:96.33:0,96,2349	0/0:29,0:28:78.25:0,78,1799	0/1:14,1:15:3.14:220,0,3	0/1:14,0:15:60.03:209,0,60	0/1:10,0:10:49.79:106,0,50	0/0:18,0:18:48.16:0,48,1204	0/0:13,0:13:36:0,36,874	0/0:21,0:20:54.17:0,54,1335	1/1:3,3:6:7.93:164,8,0	0/1:13,2:15:58.78:144,0,59	1/1:9,0:17:26.83:353,27,0	0/1:4,1:5:6.40:64,0,6
chr10	54531539	.	AACAAC	A	6100.70	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=5.438;DP=456;FS=8.473;HRun=0;HaplotypeScore=128.1153;InbreedingCoeff=0.9677;MQ=52.29;MQ0=7;MQRankSum=-8.769;QD=28.64;ReadPosRankSum=-2.415;VQSLOD=3.7761;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:84.12:0,84,1835	0/0:3,0:3:9.03:0,9,237	0/0:27,0:7:10.06:0,10,90	0/0:26,0:12:17.86:0,18,254	1/1:10,0:10:20.19:201,20,0	1/1:16,0:16:36.05:504,36,0	1/1:10,0:10:12.04:176,12,0	1/1:27,0:25:20.43:540,20,0	1/1:14,1:15:24.04:378,24,0	1/1:12,0:12:30.91:385,31,0	1/1:16,2:17:42.07:584,42,0	0/0:19,0:19:54.17:0,54,1118	0/0:13,0:13:35.33:0,35,722	1/1:10,0:10:17.73:268,18,0	1/1:12,0:12:11.91:130,12,0	0/0:10,0:9:27.09:0,27,546	0/0:34,0:33:96.08:0,96,2210	0/0:29,0:28:72.70:0,73,1689	1/1:15,1:15:39.13:648,39,0	1/1:14,1:15:36.02:500,36,0	1/1:7,1:8:18.05:275,18,0	0/0:18,0:18:48.14:0,48,1085	0/0:13,0:13:37.25:0,37,734	0/0:21,0:20:51.14:0,51,1134	1/1:7,0:6:17.85:260,18,0	1/1:15,0:14:28.93:431,29,0	1/1:12,5:17:45.12:642,45,0	1/1:5,0:5:14.99:178,15,0
chr10	54531540	.	ACAAC	A	6764.73	PASS	AB=1.000;AC=33;AF=0.589;AN=56;BaseQRankSum=3.878;DP=447;FS=11.373;HRun=0;HaplotypeScore=115.7756;InbreedingCoeff=0.9190;MQ=52.51;MQ0=7;MQRankSum=-8.708;QD=29.28;ReadPosRankSum=-2.965;VQSLOD=3.5578;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:84.15:0,84,1640	0/0:3,0:3:9.03:0,9,210	0/1:24,0:7:1.58:2,0,73	0/0:25,0:11:6.29:0,6,222	1/1:6,3:10:21.89:302,22,0	1/1:13,2:16:36.07:567,36,0	1/1:4,6:10:12.04:209,12,0	1/1:15,6:23:34.61:769,35,0	1/1:4,9:15:24.08:408,24,0	1/1:7,2:12:33.04:545,33,0	1/1:8,8:16:42.08:687,42,0	0/0:20,0:20:57.15:0,57,978	0/0:13,0:13:35.33:0,35,636	1/1:10,0:10:18.05:283,18,0	1/1:3,9:12:12:130,12,0	0/0:10,0:9:27.09:0,27,509	0/0:34,0:33:96.07:0,96,1943	0/0:28,0:27:74.98:0,75,1498	1/1:14,0:14:39.13:615,39,0	1/1:13,0:13:35.84:422,36,0	1/1:8,0:8:18.04:228,18,0	0/0:18,0:18:48.09:0,48,937	0/0:13,0:13:33.02:0,33,622	0/0:23,0:22:31.52:0,32,988	1/1:5,1:6:18.05:297,18,0	1/1:12,1:12:33.02:526,33,0	1/1:13,3:17:45.11:553,45,0	1/1:3,1:5:15.04:222,15,0
chr10	54531542	.	AAC	A	2764.43	PASS	AB=1.000;AC=33;AF=0.589;AN=56;BaseQRankSum=8.963;DP=449;FS=15.215;HRun=0;HaplotypeScore=114.4894;InbreedingCoeff=0.8870;MQ=55.27;MQ0=7;MQRankSum=-9.024;QD=11.81;ReadPosRankSum=-2.686;VQSLOD=2.0981;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:80.62:0,81,945	0/0:3,0:3:9.03:0,9,122	0/1:24,0:5:21.20:23,0,21	0/0:25,0:12:24.52:0,25,172	1/1:11,0:11:22.27:154,22,0	1/1:16,0:16:32.81:253,33,0	1/1:10,0:10:11.81:80,12,0	1/1:23,2:23:50.12:348,50,0	1/1:15,0:15:23.69:173,24,0	1/1:15,0:15:34.74:249,35,0	1/1:15,1:15:38.66:277,39,0	0/0:20,0:20:53.63:0,54,522	0/0:13,0:13:32.97:0,33,328	1/1:13,0:13:21.33:148,21,0	1/1:10,0:10:5.91:38,6,0	0/0:10,0:9:26.99:0,27,268	0/0:35,0:34:94.83:0,95,1126	0/0:28,0:27:68.67:0,69,849	1/1:15,0:14:36.87:251,37,0	1/1:14,0:14:15.45:144,15,0	1/1:7,0:7:14.12:109,14,0	0/0:17,0:17:44.28:0,44,532	0/0:12,0:12:20.19:0,20,311	0/0:23,0:22:47.47:0,47,561	1/1:8,0:7:19.66:148,20,0	1/1:15,0:14:28.31:209,28,0	1/1:16,0:16:41.94:301,42,0	1/1:3,1:4:11.87:81,12,0
chr10	54531543	.	AC	A	2816.50	PASS	AB=0.964;AC=34;AF=0.607;AN=56;BaseQRankSum=8.243;DP=445;FS=20.790;HRun=1;HaplotypeScore=105.8364;InbreedingCoeff=0.7437;MQ=56.85;MQ0=7;MQRankSum=-7.768;QD=10.47;ReadPosRankSum=-3.353;VQSLOD=-0.2405;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:80.73:0,81,750	0/0:3,0:3:9.02:0,9,93	0/1:23,1:6:12.98:13,0,33	0/1:24,1:12:2.04:2,0,116	1/1:11,0:11:24.75:189,25,0	1/1:15,0:15:32.72:247,33,0	1/1:10,0:10:11.98:109,12,0	1/1:20,3:21:55.77:386,56,0	1/1:14,1:15:23.74:175,24,0	1/1:13,1:14:38.55:305,39,0	1/1:15,1:15:38.26:258,38,0	0/0:20,0:20:44.01:0,44,372	0/0:13,0:13:31.82:0,32,234	1/1:13,0:13:26.10:201,26,0	1/1:10,0:10:5.91:38,6,0	0/0:10,0:9:26.97:0,27,237	0/0:34,0:33:87.37:0,87,842	0/0:28,0:27:71.06:0,71,653	1/1:15,1:15:34.57:235,35,0	0/1:14,0:14:0.82:78,0,1	1/1:7,0:7:8.54:45,9,0	0/0:18,0:18:43.83:0,44,391	0/1:13,1:14:4.82:5,0,204	0/0:22,0:21:21.65:0,22,389	1/1:7,1:7:20.87:163,21,0	1/1:13,1:13:35.44:274,35,0	1/1:15,1:16:36.12:214,36,0	1/1:4,0:4:11.93:89,12,0
chr10	54531546	.	A	AC	417.61	PASS	AB=0.949;AC=7;AF=0.125;AN=56;BaseQRankSum=-3.598;DP=449;FS=20.487;HRun=0;HaplotypeScore=115.2085;InbreedingCoeff=0.3955;MQ=57.17;MQ0=7;MQRankSum=4.006;QD=4.02;ReadPosRankSum=2.441;VQSLOD=1.8439;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:28,2:30:7.63:167,0,8	1/1:4,0:4:3.24:8,3,0	0/0:22,0:7:20.94:0,21,189	0/0:24,0:11:22.78:0,23,198	0/0:12,0:12:24.10:0,24,156	0/0:15,0:15:27.71:0,28,205	0/0:10,0:10:11.94:0,12,91	0/0:21,0:19:50.72:0,51,341	0/0:16,0:16:25.69:0,26,161	0/0:14,0:14:37.43:0,37,277	0/0:17,0:16:35.93:0,36,233	0/0:24,0:24:60:0,60,615	0/0:12,0:12:30.01:0,30,305	0/0:14,0:14:26.94:0,27,221	0/0:10,0:10:5.84:0,6,35	1/1:8,0:7:11.20:78,11,0	0/1:33,2:34:33.87:141,0,34	0/1:26,1:26:41.31:147,0,41	0/0:16,0:15:38.67:0,39,264	0/0:15,0:15:37.03:0,37,269	0/0:7,0:7:7.63:0,8,66	0/0:18,0:18:41.57:0,42,463	0/0:13,0:13:32.49:0,32,302	0/0:23,0:22:51.13:0,51,541	0/0:9,0:8:23.78:0,24,171	0/0:13,0:12:32.86:0,33,270	0/0:17,0:17:38.50:0,38,256	0/0:3,0:3:8.92:0,9,63
chr10	54531686	.	AGAGGAG	A	1110.07	PASS	AB=1.000;AC=14;AF=0.259;AN=54;BaseQRankSum=-3.334;DP=279;FS=2.971;HRun=0;HaplotypeScore=64.0656;InbreedingCoeff=0.4839;MQ=59.55;MQ0=8;MQRankSum=0.690;QD=10.28;ReadPosRankSum=0.239;VQSLOD=1.9786;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:6,0:6:12.02:143,12,0	./.	0/1:26,0:11:3.38:3,0,64	0/0:15,0:9:12.03:0,12,190	0/0:10,0:10:0:0,0,0	0/0:7,0:7:3.45:0,3,22	0/0:16,0:16:9.33:0,9,197	0/0:8,0:7:8.84:0,9,83	0/0:7,0:7:7.05:0,7,103	0/0:12,0:12:12.25:0,12,177	0/0:8,0:8:9.03:0,9,187	0/0:12,0:12:21.06:0,21,445	0/0:10,0:9:21.07:0,21,649	0/0:5,0:5:6.44:0,6,109	0/1:7,0:7:4.29:4,0,73	1/1:8,0:8:18.06:293,18,0	0/1:16,0:16:65.42:295,0,65	1/1:10,0:10:8.53:50,9,0	1/1:5,4:7:9.01:102,9,0	1/1:6,0:6:12.01:124,12,0	0/1:20,0:18:90.56:259,0,91	0/0:7,0:7:18.06:0,18,488	0/0:10,0:10:24.08:0,24,542	0/0:16,0:16:33.11:0,33,868	0/0:7,0:7:8.26:0,8,155	0/0:9,0:8:14.67:0,15,131	0/0:4,0:4:6.02:0,6,94	0/0:5,0:5:9.03:0,9,201
chr10	54531703	.	A	AGGTGGTGGT	1973.13	PASS	AB=0.960;AC=32;AF=0.593;AN=54;BaseQRankSum=2.273;DP=234;FS=0.774;HRun=0;HaplotypeScore=68.4843;InbreedingCoeff=0.1421;MQ=49.90;MQ0=18;MQRankSum=-3.470;QD=11.41;ReadPosRankSum=-3.802;VQSLOD=0.5301;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:9,0:7:4.85:80,5,0	./.	0/1:15,0:4:1.47:1,0,36	0/0:12,0:4:9.03:0,9,157	1/1:6,0:6:2.84:72,3,0	1/1:1,2:6:2.97:124,3,0	0/1:14,0:14:11.69:141,0,12	0/1:10,0:6:16.98:43,0,17	1/1:4,1:5:10.53:267,11,0	1/1:6,1:7:5.05:144,5,0	0/1:6,0:7:0.13:138,0,0	0/0:9,0:9:21.06:0,21,340	0/0:9,0:7:21.07:0,21,544	1/1:5,0:5:2.43:25,2,0	0/1:4,0:4:9.13:49,0,9	1/1:6,0:6:7.14:53,7,0	0/1:13,0:13:43.42:125,0,43	0/1:6,0:6:6.29:60,0,6	0/1:7,0:4:12.53:31,0,13	1/1:4,0:4:3.41:19,3,0	0/1:18,0:15:27.57:100,0,28	0/0:8,0:7:21.06:0,21,492	0/0:8,0:8:24.05:0,24,456	0/0:14,0:14:42.11:0,42,907	1/1:5,2:8:0.58:131,1,0	0/1:9,2:8:8.77:331,0,9	1/1:4,0:4:8.37:133,8,0	1/1:7,0:6:9.91:72,10,0
chr10	54531857	.	GGAGGGGA	G	913.20	PASS	AB=0.802;AC=12;AF=0.240;AN=50;BaseQRankSum=6.085;DP=252;FS=30.166;HRun=0;HaplotypeScore=78.9759;InbreedingCoeff=-0.3519;MQ=81.75;MQ0=7;MQRankSum=-4.183;QD=14.73;ReadPosRankSum=-1.794;VQSLOD=0.2043;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:10,2:11:99:133,0,512	./.	0/0:54,0:20:17.01:0,17,357	0/0:72,0:25:24.40:0,24,592	0/1:3,1:4:15.59:16,0,110	./.	0/1:8,1:9:50.30:50,0,504	0/0:11,0:10:21.02:0,21,546	0/1:2,1:3:69.45:69,0,138	0/1:3,1:4:67.56:68,0,260	0/0:3,0:3:5.84:0,6,122	0/0:8,0:8:21.07:0,21,623	0/0:5,0:5:14.08:0,14,412	0/1:1,2:3:99:142,0,113	0/1:4,3:7:99:208,0,454	./.	0/1:3,1:4:66.35:66,0,140	0/1:3,0:3:29.34:29,0,215	0/0:4,0:4:6.02:0,6,143	0/1:4,1:5:54.66:72,0,55	0/0:6,0:6:15.05:0,15,469	0/0:3,0:3:8.96:0,9,141	0/0:6,0:6:9.30:0,9,510	0/0:11,0:11:29.69:0,30,850	0/1:4,1:5:99:131,0,227	0/1:2,1:3:70.50:70,0,150	0/0:3,0:3:9.03:0,9,368	0/0:2,0:2:6.02:0,6,164
chr10	54531890	.	GGGA	G	5084.09	PASS	AB=0.628;AC=30;AF=0.536;AN=56;BaseQRankSum=-0.306;DP=341;FS=28.100;HRun=0;HaplotypeScore=88.2110;InbreedingCoeff=0.2908;MQ=88.46;MQ0=3;MQRankSum=-7.018;QD=31.58;ReadPosRankSum=1.443;VQSLOD=2.9256;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:7,10:16:99:384,0,148	1/1:0,1:1:3.01:55,3,0	0/0:59,0:26:33.71:0,34,757	0/0:67,0:31:22.82:0,23,672	0/1:3,4:7:65.84:143,0,66	1/1:0,4:4:12.04:217,12,0	1/1:0,12:12:9.68:511,10,0	0/1:16,12:28:99:611,0,478	1/1:3,8:11:11.07:403,11,0	0/1:1,4:5:24.99:204,0,25	0/0:1,1:2:5.69:0,6,60	0/0:10,0:10:27.05:0,27,547	0/0:6,0:6:12.03:0,12,229	0/1:2,5:7:78.39:252,0,78	0/1:5,7:12:99:346,0,104	1/1:0,3:3:8.99:127,9,0	1/1:1,8:9:2.07:308,2,0	1/1:0,9:9:12.04:219,12,0	1/1:0,9:9:27.08:452,27,0	1/1:0,3:3:8.99:128,9,0	1/1:0,8:8:6.75:158,7,0	0/0:8,0:8:24.08:0,24,589	0/0:10,0:10:30.10:0,30,715	0/0:16,0:16:43.03:0,43,1031	1/1:2,4:6:15.05:269,15,0	0/1:1,6:7:29.85:251,0,30	0/1:2,1:3:45.58:46,0,76	0/0:2,0:2:6.02:0,6,82
chr10	54532273	.	GA	G	1562.28	PASS	AB=0.947;AC=9;AF=0.161;AN=56;BaseQRankSum=6.938;DP=598;FS=7.897;HRun=10;HaplotypeScore=65.5794;InbreedingCoeff=0.8747;MQ=72.48;MQ0=1;MQRankSum=0.060;QD=14.88;ReadPosRankSum=1.178;VQSLOD=3.6228;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:52:99:0,138,1493	0/0:7,0:7:17.88:0,18,176	0/1:16,1:11:8:8,0,143	0/0:19,0:16:20.49:0,20,187	0/0:21,0:23:50.93:0,51,531	0/0:24,0:24:54.13:0,54,582	0/0:24,0:24:69.18:0,69,759	0/0:25,0:25:20.03:0,20,437	0/0:20,0:20:54.13:0,54,588	0/0:24,0:24:54.14:0,54,592	0/0:14,0:15:38.88:0,39,390	0/0:24,0:25:59.62:0,60,597	0/0:9,0:9:18.04:0,18,192	0/0:22,0:22:66.16:0,66,721	0/0:20,0:20:54.11:0,54,572	0/0:23,1:24:28.08:0,28,531	0/0:36,0:36:99:0,102,1128	0/0:12,0:12:30.08:0,30,332	1/1:3,15:18:44.99:390,45,0	1/1:4,12:16:35.98:313,36,0	1/1:2,18:20:44.99:390,45,0	0/0:16,1:17:16.05:0,16,398	0/0:24,1:25:43.13:0,43,696	0/0:20,0:20:48.08:0,48,509	0/0:16,0:16:45.12:0,45,498	0/0:20,0:20:49.01:0,49,526	1/1:7,26:33:71.98:625,72,0	0/0:13,0:13:33.05:0,33,338
chr10	54533538	.	GT	G	766.31	PASS	AB=0.971;AC=32;AF=0.941;AN=34;BaseQRankSum=0.925;DP=222;FS=3.522;HRun=2;HaplotypeScore=14.5592;InbreedingCoeff=-0.1926;MQ=20.73;MQ0=13;MQRankSum=-2.292;QD=5.01;ReadPosRankSum=1.970;VQSLOD=0.9762;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	./.	./.	1/1:1,6:5:3.01:41,3,0	1/1:0,3:2:6.02:83,6,0	1/1:0,6:2:3.01:41,3,0	1/1:0,7:1:3.01:42,3,0	1/1:0,8:4:6.02:82,6,0	1/1:14,0:7:8.44:41,8,0	0/1:11,0:8:13.55:30,0,14	1/1:0,7:2:6.02:83,6,0	1/1:0,12:5:3.01:41,3,0	1/1:0,6:4:6.02:83,6,0	./.	./.	1/1:1,5:2:2.99:23,3,0	1/1:0,15:4:3.01:41,3,0	./.	1/1:8,0:4:2.88:15,3,0	0/1:15,1:13:7.42:32,0,7	1/1:13,0:5:2.88:15,3,0	./.	1/1:0,7:5:9.03:119,9,0	1/1:0,7:4:3.01:41,3,0	./.
chr10	54533687	.	T	TA	4978.87	PASS	AB=0.917;AC=25;AF=0.446;AN=56;BaseQRankSum=-12.854;DP=459;FS=20.102;HRun=9;HaplotypeScore=43.0860;InbreedingCoeff=0.9303;MQ=55.85;MQ0=7;MQRankSum=-0.035;QD=24.05;ReadPosRankSum=0.173;VQSLOD=3.2657;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:71.99:0,72,625	0/0:8,0:8:18:0,18,156	0/0:13,0:6:17.99:0,18,154	0/0:8,0:2:3:0,3,26	1/1:2,10:14:12.72:334,13,0	1/1:1,13:14:36.10:398,36,0	1/1:3,16:19:16.07:405,16,0	1/1:10,17:24:31.19:558,31,0	1/1:1,9:9:24.06:266,24,0	1/1:3,11:13:33.09:365,33,0	1/1:2,13:15:36.10:398,36,0	0/0:15,0:13:32.98:0,33,286	0/0:18,0:17:47.97:0,48,413	1/1:1,13:14:36.10:398,36,0	1/1:0,11:11:30.08:332,30,0	0/0:11,0:11:26.98:0,27,234	0/0:22,0:21:47.98:0,48,417	0/0:16,0:16:38.99:0,39,339	0/0:24,0:23:53.97:0,54,469	0/0:14,0:14:32.99:0,33,286	0/0:24,0:24:62.96:0,63,547	0/0:18,0:18:50.99:0,51,443	0/1:10,1:11:0.19:0,0,227	0/0:14,0:14:32.99:0,33,286	1/1:1,23:23:60.16:664,60,0	1/1:7,18:25:51.14:563,51,0	0/0:23,0:22:62.98:0,63,547	1/1:0,9:9:27.07:299,27,0
chr10	54533973	.	C	CTG	3027.64	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=10.989;DP=716;FS=3.794;HRun=0;HaplotypeScore=86.4594;InbreedingCoeff=0.9609;MQ=58.90;MQ0=31;MQRankSum=-1.917;QD=30.28;ReadPosRankSum=2.871;VQSLOD=5.5469;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,117,1767	0/0:13,0:13:33.03:0,33,436	0/0:37,0:9:4.43:0,4,263	0/0:41,0:12:35.97:0,36,493	0/0:16,0:16:36.12:0,36,550	0/0:20,0:20:51.16:0,51,760	0/0:32,0:32:90.31:0,90,1375	0/0:18,0:17:45.14:0,45,670	0/0:27,0:26:75.24:0,75,1121	0/0:24,0:24:69.22:0,69,1015	0/0:24,0:22:63:0,63,867	0/0:39,0:39:99:0,111,1584	0/0:23,1:24:32.09:0,32,903	0/0:22,0:22:60.20:0,60,918	0/0:24,0:24:69.22:0,69,1026	0/0:18,0:17:51.16:0,51,759	0/0:21,0:20:60.16:0,60,873	0/0:14,0:14:36.12:0,36,551	1/1:0,14:15:42.14:763,42,0	1/1:0,9:10:21.07:391,21,0	1/1:10,42:45:62.89:1169,63,0	0/0:29,0:29:41.57:0,42,1065	0/0:22,0:21:51.17:0,51,781	0/0:30,0:30:84.27:0,84,1260	0/0:35,0:35:99:0,102,1534	0/0:31,0:30:84.25:0,84,1209	1/1:0,23:22:48.16:864,48,0	0/0:12,0:11:33.11:0,33,505
chr10	54535701	.	G	GT	1747.20	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=13.593;DP=789;FS=1.408;HRun=1;HaplotypeScore=107.5297;InbreedingCoeff=0.9992;MQ=77.98;MQ0=0;MQRankSum=-12.959;QD=18.01;ReadPosRankSum=-0.977;VQSLOD=3.5972;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:66,0:66:99:0,193,2453	0/0:8,0:8:24.06:0,24,295	0/0:24,0:24:60.06:0,60,695	0/0:14,0:14:35.36:0,35,393	0/0:20,0:20:60.15:0,60,740	0/0:25,0:25:75.15:0,75,924	0/0:29,0:29:84.23:0,84,1058	0/0:23,0:23:66.20:0,66,834	0/0:49,0:49:99:0,144,1840	0/0:26,0:26:75.24:0,75,972	0/0:12,0:12:36.12:0,36,464	0/0:54,0:54:99:0,162,2058	0/0:28,0:28:84.26:0,84,1075	0/0:36,0:36:99:0,102,1322	0/0:31,0:31:84.25:0,84,1061	0/0:38,0:38:99:0,111,1423	0/0:29,0:29:78.23:0,78,993	0/0:26,0:26:75.24:0,75,970	1/1:9,16:25:74.66:614,75,0	1/1:2,19:22:52.73:386,53,0	1/1:10,21:31:59.61:536,60,0	0/0:28,0:28:84.25:0,84,1062	0/0:14,0:14:39.12:0,39,493	0/0:38,0:38:99:0,111,1441	0/0:25,0:25:69.22:0,69,894	0/0:39,0:39:99:0,114,1468	1/1:3,16:19:52.69:372,53,0	0/0:10,0:10:30.10:0,30,389
chr10	54535703	.	CACTGT	C	3160.02	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=13.538;DP=788;FS=5.710;HRun=0;HaplotypeScore=162.6899;InbreedingCoeff=0.9995;MQ=77.72;MQ0=0;MQRankSum=-12.864;QD=36.74;ReadPosRankSum=0.117;VQSLOD=3.2405;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:68,0:68:99:0,205,6598	0/0:9,0:9:27.09:0,27,839	0/0:22,0:22:63.14:0,63,1788	0/0:15,0:15:45.07:0,45,1241	0/0:22,0:22:66.23:0,66,2092	0/0:23,0:23:69.22:0,69,2203	0/0:29,0:29:87.28:0,87,2784	0/0:24,0:24:69.24:0,69,2151	0/0:50,0:50:99:0,151,4688	0/0:26,0:26:75.25:0,75,2364	0/0:13,0:13:39.13:0,39,1227	0/0:54,0:54:99:0,163,5235	0/0:29,0:29:87.30:0,87,2861	0/0:36,0:36:99:0,108,3493	0/0:34,0:34:99:0,99,3204	0/0:37,0:37:99:0,111,3650	0/0:29,0:29:81.26:0,81,2491	0/0:26,0:26:78.27:0,78,2519	1/1:1,16:17:51.17:856,51,0	1/1:2,19:21:54.18:819,54,0	1/1:9,20:29:60.58:830,61,0	0/0:27,0:27:81.28:0,81,2609	0/0:15,0:15:42.14:0,42,1357	0/0:38,0:38:99:0,114,3707	0/0:25,0:25:75.26:0,75,2432	0/0:41,0:41:99:0,123,4003	1/1:3,16:19:54.18:817,54,0	0/0:10,0:10:30.10:0,30,999
chr10	54535708	.	T	TTC	1864.67	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=13.883;DP=792;FS=0.436;HRun=0;HaplotypeScore=123.2649;InbreedingCoeff=0.9987;MQ=79.08;MQ0=0;MQRankSum=-13.295;QD=20.27;ReadPosRankSum=-0.539;VQSLOD=3.6294;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:67,0:67:99:0,202,3273	0/0:9,0:9:27.09:0,27,440	0/0:20,0:20:57.19:0,57,880	0/0:20,0:20:22.51:0,23,712	0/0:20,0:20:60.20:0,60,979	0/0:23,0:23:69.24:0,69,1123	0/0:28,0:28:84.27:0,84,1346	0/0:21,0:21:60.20:0,60,949	0/0:48,0:48:99:0,141,2297	0/0:27,0:27:75.26:0,75,1221	0/0:14,0:14:42.14:0,42,680	0/0:54,0:54:99:0,163,2616	0/0:30,0:30:90.31:0,90,1464	0/0:37,0:37:99:0,108,1762	0/0:35,0:35:99:0,105,1705	0/0:38,0:38:99:0,114,1852	0/0:28,0:28:78.27:0,78,1265	0/0:26,0:26:75.26:0,75,1217	1/1:17,1:18:53.79:577,54,0	1/1:20,2:22:50.73:474,51,0	1/1:23,5:30:62.71:563,63,0	0/0:27,0:27:81.28:0,81,1319	0/0:15,0:15:42.14:0,42,685	0/0:38,0:38:99:0,114,1852	0/0:24,0:24:72.25:0,72,1175	0/0:41,0:41:99:0,120,1952	1/1:20,2:22:54.31:411,54,0	0/0:10,0:10:30.10:0,30,489
chr10	54536507	.	AAATGTT	A	16313.40	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=17.615;DP=671;FS=10.161;HRun=0;HaplotypeScore=150.6040;InbreedingCoeff=0.9854;MQ=76.11;MQ0=0;MQRankSum=-18.635;QD=58.05;ReadPosRankSum=1.654;VQSLOD=4.6546;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,163,5715	0/0:16,0:16:42.14:0,42,1438	0/0:19,0:19:57.19:0,57,1692	0/0:25,0:25:75.26:0,75,2540	1/1:1,31:32:84.29:1897,84,0	1/1:0,18:18:45.15:1081,45,0	1/1:1,26:27:72.25:1730,72,0	1/1:5,22:27:63.20:1412,63,0	1/1:0,26:26:75.26:1800,75,0	1/1:2,27:29:84.27:1941,84,0	1/1:0,16:16:39.13:936,39,0	0/0:20,0:20:57.20:0,57,1969	0/0:25,0:25:72.23:0,72,2485	1/1:2,23:25:60.21:1441,60,0	1/1:1,28:29:60.01:1411,60,0	0/0:14,0:14:42.14:0,42,1489	0/0:28,0:28:84.29:0,84,2946	0/0:23,0:23:69.24:0,69,2416	0/0:29,0:29:84.29:0,84,2900	0/0:25,0:25:75.26:0,75,2611	0/0:31,0:31:90.31:0,90,3116	0/0:15,0:15:45.15:0,45,1509	0/0:23,0:23:66.23:0,66,2289	0/0:24,0:24:72.23:0,72,2512	1/1:2,19:21:42.14:979,42,0	1/1:1,24:25:66.23:1554,66,0	0/0:18,0:18:54.19:0,54,1891	1/1:0,6:6:6.02:130,6,0
chr10	54537649	.	G	GA	3888.52	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-11.112;DP=626;FS=7.082;HRun=2;HaplotypeScore=59.0750;InbreedingCoeff=0.9992;MQ=74.12;MQ0=0;MQRankSum=-1.842;QD=39.28;ReadPosRankSum=-1.396;VQSLOD=3.4276;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,135,1671	0/0:8,0:8:24.08:0,24,297	0/0:13,0:13:30.07:0,30,359	0/0:15,0:15:35.90:0,36,413	0/0:32,0:32:96.29:0,96,1175	0/0:20,0:20:60.18:0,60,731	0/0:25,0:25:75.24:0,75,930	0/0:33,0:33:90.28:0,90,1116	0/0:20,0:20:57.17:0,57,694	0/0:26,0:26:72.23:0,72,892	0/0:22,0:22:66.21:0,66,818	0/0:19,0:19:48.13:0,48,581	0/0:17,0:17:51.16:0,51,632	0/0:16,0:16:45.14:0,45,557	0/0:19,0:19:57.18:0,57,707	0/0:20,0:20:60.19:0,60,744	0/0:25,0:25:66.19:0,66,805	0/0:29,0:29:81.25:0,81,1004	1/1:0,14:14:42.14:605,42,0	1/1:1,19:20:54.18:778,54,0	1/1:0,43:43:99:1685,117,0	0/0:23,0:23:60.19:0,60,744	0/0:24,0:24:66.19:0,66,806	0/0:23,0:23:69.22:0,69,855	0/0:12,0:12:36.11:0,36,446	0/0:26,0:26:69.21:0,69,845	1/1:2,20:22:57.19:821,57,0	0/0:13,0:13:36.11:0,36,446
chr10	54538610	.	A	ATGGTTTCTCAT	1415.88	PASS	AB=0.714;AC=21;AF=0.955;AN=22;BaseQRankSum=-2.329;DP=32;FS=6.767;HRun=0;HaplotypeScore=15.9239;InbreedingCoeff=-0.2359;MQ=159.07;MQ0=0;MQRankSum=-1.270;QD=64.36;ReadPosRankSum=-0.953;VQSLOD=1.4576;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	./.	1/1:5,1:7:4.56:595,5,0	0/1:3,1:5:18.09:462,0,18	./.	./.	./.	1/1:1,0:1:3.01:50,3,0	./.	1/1:2,0:2:3.01:49,3,0	./.	1/1:1,0:1:3:25,3,0	./.	./.	./.	./.	1/1:1,0:1:3.01:44,3,0	1/1:1,0:1:2.99:24,3,0	1/1:1,0:1:3.01:119,3,0	./.	./.	./.	./.	./.	./.	1/1:1,0:1:3:25,3,0	1/1:1,0:1:3.01:56,3,0	1/1:1,0:1:3.01:45,3,0
chr10	54559753	.	TAC	T	2587.56	PASS	AB=0.961;AC=23;AF=0.411;AN=56;BaseQRankSum=7.352;DP=921;FS=55.139;HRun=0;HaplotypeScore=399.6527;InbreedingCoeff=-0.2802;MQ=32.96;MQ0=16;MQRankSum=-6.746;QD=3.53;ReadPosRankSum=5.521;VQSLOD=0.9362;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:17.09:0,17,254	0/1:19,0:19:29.73:30,0,120	0/0:14,2:3:6.02:0,6,82	0/0:27,0:6:15.05:0,15,192	0/1:42,1:43:76.68:77,0,96	0/1:21,0:21:47.49:47,0,176	0/1:19,0:18:40.64:41,0,183	0/1:58,6:48:99:185,0,900	0/1:31,4:35:34.97:77,0,35	0/1:60,2:62:99:112,0,1117	0/1:41,1:42:65.39:65,0,154	0/1:41,3:43:2.72:3,0,145	0/0:36,2:38:4.81:0,5,287	0/1:31,1:32:40.30:40,0,132	0/1:41,1:41:38.13:38,0,137	0/0:42,1:43:2.57:0,3,195	0/0:11,0:10:6.49:0,6,102	0/1:13,0:13:12.01:12,0,212	1/1:14,10:22:46.04:512,46,0	1/1:37,20:57:61.50:601,62,0	1/1:5,13:16:9.03:117,9,0	0/1:47,2:49:58.42:172,0,58	0/1:36,0:36:40.36:77,0,40	0/0:21,0:21:18.01:0,18,247	0/1:46,1:47:99:192,0,214	0/1:39,2:39:99:118,0,717	0/1:18,5:23:4.93:239,0,5	0/0:15,0:15:24.27:0,24,496
chr10	54559759	.	C	CTTAA	10046.14	PASS	AB=0.787;AC=22;AF=0.393;AN=56;BaseQRankSum=16.322;DP=945;FS=206.591;HRun=0;HaplotypeScore=438.3303;InbreedingCoeff=-0.6631;MQ=33.94;MQ0=20;MQRankSum=-12.791;QD=12.27;ReadPosRankSum=4.431;VQSLOD=0.6359;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:27.65:0,28,514	0/1:11,8:20:99:178,0,176	0/0:21,0:5:12:0,12,200	0/0:30,0:7:15.05:0,15,300	0/1:31,10:43:99:273,0,111	0/1:13,4:20:99:236,0,266	0/1:16,3:18:99:202,0,280	0/1:56,10:50:99:961,0,1356	0/1:24,7:36:31.47:253,0,31	0/1:46,16:63:99:1862,0,1327	0/1:29,13:43:99:460,0,152	0/1:29,8:44:99:126,0,148	0/1:26,6:37:99:103,0,413	0/1:24,4:32:99:198,0,185	0/1:35,5:42:99:291,0,211	0/1:30,8:41:99:157,0,270	0/0:12,0:11:15.01:0,15,265	0/1:11,1:13:37.54:38,0,346	0/1:23,0:21:99:103,0,400	0/1:40,16:59:99:1068,0,229	0/0:20,0:18:6.01:0,6,115	0/1:28,18:48:58.46:777,0,58	0/1:22,14:38:69.07:370,0,69	0/0:19,0:20:21.58:0,22,430	0/1:32,14:47:99:993,0,325	0/1:34,6:40:99:570,0,1092	0/1:9,8:21:51.42:774,0,51	0/1:14,1:15:53.07:53,0,595
chr10	54559764	.	AT	A	1668.45	PASS	AB=0.803;AC=14;AF=0.250;AN=56;BaseQRankSum=14.061;DP=958;FS=136.764;HRun=1;HaplotypeScore=421.9822;InbreedingCoeff=-0.3529;MQ=34.68;MQ0=20;MQRankSum=-9.637;QD=2.62;ReadPosRankSum=1.031;VQSLOD=-0.4347;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:32.76:0,33,494	0/0:11,8:20:0.98:0,1,198	0/0:23,0:6:15.04:0,15,218	0/0:33,0:10:24.08:0,24,363	0/1:30,10:42:14.39:14,0,162	0/0:15,4:22:5.16:0,5,248	0/0:16,3:18:10.47:0,10,234	0/1:54,10:50:99:312,0,1234	0/1:25,7:37:6.48:6,0,158	0/1:48,17:66:99:598,0,1438	0/1:30,13:44:76.47:76,0,145	0/1:29,8:44:20.38:20,0,214	0/1:25,7:37:3.42:3,0,394	0/0:23,4:31:5.40:0,5,188	0/0:34,5:41:9.42:0,9,357	0/1:29,8:40:3.75:4,0,270	0/0:12,0:11:15.05:0,15,221	0/0:12,1:14:24.11:0,24,420	0/0:22,0:19:22.99:0,23,397	0/1:40,16:59:99:147,0,412	0/0:20,0:17:11.95:0,12,113	0/1:28,18:48:20.77:21,0,188	0/1:23,14:39:9.45:9,0,206	0/0:19,0:20:22.75:0,23,358	0/1:33,14:48:99:251,0,394	0/1:34,6:40:99:121,0,1065	0/1:10,8:22:99:228,0,114	0/0:17,1:18:3.07:0,3,580
chr10	54561626	.	C	CG	1216.41	PASS	AB=0.849;AC=31;AF=0.574;AN=54;BaseQRankSum=-1.568;DP=459;FS=6.862;HRun=11;HaplotypeScore=101.8483;InbreedingCoeff=0.0984;MQ=74.02;MQ0=0;MQRankSum=-2.605;QD=3.61;ReadPosRankSum=-1.375;VQSLOD=0.7222;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:15,2:17:29.25:72,0,29	0/1:7,3:10:14.30:38,0,14	0/1:14,0:14:8.32:8,0,51	0/1:10,0:10:8.27:8,0,34	1/1:16,0:16:3:25,3,0	1/1:13,2:15:8.97:80,9,0	0/1:15,15:31:52.57:81,0,53	1/1:9,3:12:11.94:108,12,0	0/0:16,0:16:8.84:0,9,70	0/1:14,0:14:0:0,0,0	1/1:6,0:6:5.99:51,6,0	0/0:18,0:20:10.71:0,11,171	0/0:20,0:20:14.78:0,15,116	1/1:7,7:14:5.97:50,6,0	1/1:13,15:27:9.02:91,9,0	1/1:9,7:16:11.98:111,12,0	0/1:6,11:17:5.24:123,0,5	0/1:7,11:18:5.24:120,0,5	0/1:12,2:14:11.25:70,0,11	0/1:13,0:13:17.23:22,0,17	1/1:16,5:21:0.29:163,0,0	0/0:18,0:20:13.89:0,14,98	0/0:16,0:17:4.93:0,5,29	0/0:23,0:26:16.79:0,17,122	0/1:16,2:18:11.23:68,0,11	1/1:10,5:15:6.01:61,6,0	1/1:9,9:18:3.01:30,3,0	./.
chr10	54562486	.	AATGATGATGATGATGATG	A	15735.51	PASS	AC=22;AF=0.407;AN=54;BaseQRankSum=12.282;DP=607;FS=7.188;HRun=0;HaplotypeScore=276.4879;InbreedingCoeff=0.9548;MQ=59.27;MQ0=0;MQRankSum=-8.305;QD=60.29;ReadPosRankSum=-0.002;VQSLOD=3.3689;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,108,8068	0/0:8,0:8:18.06:0,18,1499	0/0:25,0:22:38.73:0,39,1377	0/0:22,0:12:20.98:0,21,488	1/1:5,21:26:39.13:1778,39,0	1/1:3,13:16:6.02:295,6,0	1/1:8,14:22:3.01:147,3,0	1/1:10,19:29:56.62:488,57,0	1/1:5,18:23:39.13:1917,39,0	1/1:4,27:31:74.83:2789,75,0	1/1:0,14:14:35.93:1371,36,0	0/0:24,0:24:57.20:0,57,4471	0/0:27,0:28:75.26:0,75,5554	1/1:4,15:19:24.08:1162,24,0	1/1:6,22:28:33.11:1605,33,0	0/0:16,0:16:39.12:0,39,2285	0/0:7,0:22:42.14:0,42,2264	0/0:6,0:17:27.09:0,27,1560	0/0:16,0:21:36.08:0,36,1949	0/0:8,0:22:45.14:0,45,2769	0/0:16,0:16:17.70:0,18,1096	0/0:16,0:16:27.09:0,27,2233	0/0:10,0:10:27.09:0,27,1853	0/0:29,0:29:54.19:0,54,4379	1/1:6,16:22:33.11:1609,33,0	1/1:4,27:31:75.01:2573,75,0	0/0:8,0:22:36.59:0,37,2046	./.
chr10	54564457	.	G	GCA	2088.29	PASS	AB=0.907;AC=33;AF=0.635;AN=52;BaseQRankSum=-2.538;DP=518;FS=3.728;HRun=0;HaplotypeScore=82.2837;InbreedingCoeff=-0.3510;MQ=69.77;MQ0=10;MQRankSum=-0.510;QD=4.56;ReadPosRankSum=-0.414;VQSLOD=2.2723;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:33,2:45:21.92:83,0,22	1/1:5,0:5:6:60,6,0	./.	./.	0/0:9,0:16:9.41:0,9,45	0/1:17,0:17:48.87:87,0,49	0/1:13,9:24:50.66:197,0,51	0/1:22,0:21:0:0,0,0	0/1:15,1:16:29.96:30,0,74	1/1:20,0:19:14.81:163,15,0	0/1:12,0:12:1.29:39,0,1	1/1:9,4:13:12.02:151,12,0	1/1:10,0:14:2.81:26,3,0	0/1:17,0:17:48.85:49,0,70	0/1:13,6:19:23.21:79,0,23	1/1:8,0:15:15:130,15,0	0/1:17,11:31:18.83:282,0,19	0/1:13,3:18:65.13:188,0,65	0/1:12,0:11:9.02:38,0,9	0/1:12,0:12:67.75:68,0,93	0/1:27,0:27:23.69:73,0,24	0/1:9,0:10:7.52:22,0,8	0/1:11,0:11:1.32:38,0,1	0/1:28,7:38:74.98:115,0,75	1/1:8,7:15:2.93:44,3,0	1/1:13,0:13:8.69:80,9,0	1/1:12,1:20:20.93:183,21,0	0/1:7,0:9:7.95:8,0,47
chr10	54565759	.	GCACACACA	G	2774.04	PASS	AB=0.895;AC=30;AF=0.556;AN=54;BaseQRankSum=2.800;DP=569;FS=12.694;HRun=0;HaplotypeScore=178.0857;InbreedingCoeff=0.6236;MQ=62.64;MQ0=11;MQRankSum=-4.994;QD=9.63;ReadPosRankSum=1.885;VQSLOD=1.9764;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:33,0:31:11.90:150,12,0	0/1:7,0:6:0.19:48,0,0	./.	0/0:39,0:26:8.51:0,9,73	1/1:14,5:20:6.55:224,7,0	1/1:11,3:14:3.01:54,3,0	0/1:25,0:24:71.79:72,0,96	0/1:29,0:27:0.02:191,0,0	1/1:8,9:18:13.80:158,14,0	1/1:14,4:17:21.06:449,21,0	1/1:5,8:14:6.02:93,6,0	0/0:21,0:24:31.64:0,32,868	0/0:13,0:14:18.06:0,18,547	1/1:17,2:20:13.25:226,13,0	1/1:11,2:13:12.04:239,12,0	1/1:8,0:12:7.47:76,7,0	1/1:17,0:18:0.15:74,0,0	1/1:14,0:16:25.23:402,25,0	0/0:14,0:15:23.84:0,24,299	0/0:12,0:16:27.08:0,27,535	0/0:38,0:42:50.35:0,50,815	0/0:17,0:16:18.05:0,18,605	0/0:13,0:15:39.12:0,39,1129	0/0:40,0:43:56.82:0,57,1906	0/1:3,8:11:8.55:197,0,9	1/1:15,2:17:6.51:244,7,0	0/0:12,0:19:14.39:0,14,203	1/1:3,0:3:6.01:71,6,0
chr10	54565791	.	A	ACT	635.25	PASS	AB=0.991;AC=16;AF=0.286;AN=56;BaseQRankSum=4.219;DP=616;FS=49.597;HRun=0;HaplotypeScore=166.0104;InbreedingCoeff=-0.2578;MQ=44.33;MQ0=35;MQRankSum=-2.898;QD=2.43;ReadPosRankSum=-2.699;VQSLOD=0.8961;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:35,1:33:5.21:5,0,183	0/1:7,0:6:21.67:22,0,50	0/0:14,0:4:11.90:0,12,98	0/0:33,0:13:18.73:0,19,259	0/1:27,0:25:99:141,0,124	1/1:9,0:8:1.97:33,2,0	0/1:16,1:17:36.86:37,0,130	0/1:31,0:25:94.01:94,0,376	0/1:18,0:18:60.25:81,0,60	0/0:34,0:30:23.02:0,23,531	0/1:15,0:15:31.08:31,0,55	0/0:23,0:23:41.89:0,42,473	0/0:12,0:12:25.40:0,25,257	0/1:18,0:18:27.45:114,0,27	0/1:15,0:15:99:110,0,105	0/1:15,0:15:9.65:10,0,68	0/0:19,1:20:19.64:0,20,227	0/1:19,1:20:66.11:66,0,216	0/0:21,0:18:35.42:0,35,336	0/0:17,0:16:47.78:0,48,392	0/0:65,0:58:99:0,125,1008	0/0:20,0:20:32.77:0,33,338	0/0:25,0:24:55.47:0,55,577	0/0:53,0:52:95.99:0,96,1083	0/1:12,0:12:28.31:28,0,52	0/1:12,0:12:13.61:14,0,147	0/0:18,0:17:32.62:0,33,248	0/1:9,0:7:5.21:5,0,82
chr10	54565860	.	G	GAGAC	6963.57	PASS	AB=0.838;AC=35;AF=0.625;AN=56;BaseQRankSum=-0.028;DP=733;FS=4.300;HRun=0;HaplotypeScore=208.7726;InbreedingCoeff=0.3789;MQ=50.90;MQ0=3;MQRankSum=-3.613;QD=12.94;ReadPosRankSum=-5.012;VQSLOD=3.6810;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:18,14:32:23.94:383,0,24	0/1:4,10:14:24.09:479,0,24	0/0:21,0:12:3.01:0,3,43	0/0:27,0:17:0:0,0,0	1/1:22,0:22:14.26:42,14,0	1/1:13,0:13:10.19:30,10,0	1/1:28,0:28:3.70:10,4,0	1/1:48,0:47:64.05:487,64,0	1/1:27,0:27:18.16:91,18,0	0/1:31,0:30:63.47:100,0,63	1/1:22,0:22:6.11:18,6,0	0/0:32,0:32:63.03:0,63,858	0/0:8,0:9:18.04:0,18,242	1/1:19,0:19:13.13:79,13,0	1/1:30,0:30:1.65:104,2,0	1/1:5,9:15:9.03:216,9,0	0/1:9,20:31:0.89:342,0,1	1/1:7,21:29:36.12:862,36,0	1/1:16,6:21:42.11:864,42,0	1/1:5,22:31:32.98:679,33,0	1/1:37,7:44:39.09:741,39,0	0/0:37,0:37:41.90:0,42,529	0/0:26,0:27:44.62:0,45,523	0/0:42,0:42:54.09:0,54,735	0/1:12,0:12:3.09:33,0,3	0/1:32,0:32:70.55:338,0,71	1/1:6,20:28:47.82:1055,48,0	0/1:6,0:6:13.97:14,0,20
chr10	54565884	.	C	CAGACAGAT	5619.34	PASS	AB=0.952;AC=28;AF=0.538;AN=52;BaseQRankSum=5.934;DP=711;FS=3.417;HRun=0;HaplotypeScore=213.6174;InbreedingCoeff=0.1986;MQ=51.49;MQ0=5;MQRankSum=-2.115;QD=11.13;ReadPosRankSum=3.294;VQSLOD=3.9530;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:23:39.68:40,0,143	0/1:14,0:14:78.10:78,0,90	0/0:12,0:8:20.60:0,21,234	0/0:17,0:11:17.34:0,17,176	./.	./.	1/1:5,23:29:2.94:18,3,0	1/1:49,0:47:99:1348,129,0	1/1:3,24:29:3.01:119,3,0	1/1:6,15:21:35.98:647,36,0	0/1:2,21:28:0.03:0,0,0	0/0:29,0:29:69.07:0,69,1459	0/0:12,0:12:27.03:0,27,460	1/1:2,20:24:2.94:129,3,0	1/1:23,8:31:36:448,36,0	0/1:16,0:16:31.36:53,0,31	0/1:28,0:28:47.08:47,0,90	0/1:28,0:28:28.38:140,0,28	0/1:32,0:30:93.88:94,0,280	0/1:38,0:38:69.83:70,0,208	0/1:31,0:31:77.91:78,0,97	0/0:33,0:33:56.82:0,57,819	0/0:30,0:30:65.93:0,66,1031	0/0:34,0:34:65.55:0,66,1281	1/1:10,2:12:22.86:275,23,0	1/1:29,6:35:83.80:1678,84,0	0/1:27,0:27:39.29:152,0,39	1/1:8,0:8:14.98:207,15,0
chr10	54566690	.	A	ACTCT	1401.72	PASS	AB=1.000;AC=12;AF=0.214;AN=56;BaseQRankSum=2.067;DP=579;FS=2.135;HRun=0;HaplotypeScore=134.5250;InbreedingCoeff=0.5409;MQ=66.22;MQ0=8;MQRankSum=-3.065;QD=9.34;ReadPosRankSum=-2.896;VQSLOD=2.0384;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:68.91:0,69,926	0/0:11,0:11:26.99:0,27,415	0/0:30,0:21:60.03:0,60,983	0/0:30,0:18:47.96:0,48,747	0/0:13,0:12:12.04:0,12,185	0/1:14,0:14:6.52:7,0,262	0/0:21,0:21:32.82:0,33,437	0/0:28,0:27:27.72:0,28,963	0/0:28,0:26:33.34:0,33,483	0/0:26,0:26:52.55:0,53,711	0/0:6,0:6:8.98:0,9,147	0/0:24,0:24:72.23:0,72,1222	0/0:17,0:17:51.17:0,51,873	0/1:18,0:18:3.48:3,0,336	0/0:13,0:13:7.72:0,8,297	0/0:31,0:31:10.14:0,10,832	0/0:28,0:27:59.65:0,60,613	0/0:15,0:15:35.93:0,36,457	1/1:20,1:21:51.65:957,52,0	1/1:22,0:22:5.98:130,6,0	1/1:4,23:29:9.03:235,9,0	0/0:17,0:17:47.99:0,48,739	0/0:19,0:18:51.17:0,51,851	0/0:22,0:22:63.19:0,63,1050	0/0:14,0:14:24.06:0,24,346	0/1:24,0:21:26.04:26,0,476	1/1:16,0:16:9.03:195,9,0	0/1:6,0:6:5.91:6,0,119
chr10	54566692	.	T	TCA	2316.60	PASS	AB=0.817;AC=35;AF=0.673;AN=52;BaseQRankSum=0.546;DP=618;FS=2.357;HRun=0;HaplotypeScore=118.9147;InbreedingCoeff=0.5291;MQ=63.50;MQ0=9;MQRankSum=-3.395;QD=5.26;ReadPosRankSum=-1.665;VQSLOD=3.1346;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:25,14:42:16.32:262,16,0	0/1:8,4:12:26.71:39,0,27	./.	./.	0/1:11,0:18:0:0,0,0	1/1:15,0:15:8.50:74,9,0	1/1:22,0:22:5.81:47,6,0	1/1:28,0:27:6.34:37,6,0	1/1:28,0:26:17.27:101,17,0	1/1:25,0:25:13.27:97,13,0	0/1:7,0:7:0:0,0,0	0/0:26,0:26:41.72:0,42,439	0/0:18,0:18:21.05:0,21,229	1/1:18,0:18:5.95:43,6,0	1/1:12,1:24:3:26,3,0	0/1:14,16:34:42.24:580,0,42	1/1:12,15:27:22.03:478,22,0	1/1:8,7:15:12.04:179,12,0	1/1:4,0:20:14.88:121,15,0	1/1:4,0:25:3.38:53,3,0	1/1:30,0:30:6.31:37,6,0	0/0:14,0:18:23.05:0,23,175	0/0:20,0:19:12.02:0,12,122	0/0:22,0:22:35.31:0,35,367	0/0:14,0:14:0.47:0,0,1	1/1:22,0:19:18:184,18,0	1/1:0,0:16:9.01:86,9,0	0/1:8,0:8:0.07:37,0,0
chr10	54568673	.	AT	A	4897.08	PASS	AB=0.726;AC=24;AF=0.429;AN=56;BaseQRankSum=10.832;DP=528;FS=0.729;HRun=9;HaplotypeScore=61.7107;InbreedingCoeff=0.8742;MQ=67.53;MQ0=3;MQRankSum=0.523;QD=20.15;ReadPosRankSum=1.035;VQSLOD=5.3161;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:45:99:0,120,1341	0/0:10,0:10:27.07:0,27,302	0/0:18,0:12:24.04:0,24,259	0/0:6,0:6:12.03:0,12,132	1/1:4,16:20:48.02:438,48,0	1/1:1,15:16:42.02:384,42,0	0/1:3,13:16:4.64:210,0,5	1/1:4,21:25:60.02:544,60,0	1/1:2,19:21:42.02:384,42,0	1/1:3,25:28:72.04:658,72,0	1/1:2,17:19:16.39:400,16,0	0/0:12,0:12:30.09:0,30,346	0/1:8,1:9:0.39:0,0,249	1/1:0,15:15:33.02:302,33,0	1/1:1,9:11:26.05:225,26,0	0/0:8,0:8:18.05:0,18,208	0/0:23,0:23:57.17:0,57,658	0/0:23,0:23:54.14:0,54,612	0/0:20,0:20:54.14:0,54,611	0/0:27,0:27:69.21:0,69,796	0/0:10,1:11:2.61:0,3,273	0/0:23,0:23:66.18:0,66,749	0/0:24,0:24:54.14:0,54,609	0/0:14,0:14:42.12:0,42,485	1/1:2,19:21:39.02:357,39,0	1/1:2,18:20:54.03:493,54,0	0/0:21,0:20:63.19:0,63,726	1/1:2,20:22:56.07:500,56,0
chr10	54569054	.	G	GAC	2488.34	PASS	AB=0.781;AC=30;AF=0.556;AN=54;BaseQRankSum=0.301;DP=564;FS=7.862;HRun=0;HaplotypeScore=101.8735;InbreedingCoeff=-0.1202;MQ=70.11;MQ0=9;MQRankSum=-0.054;QD=5.76;ReadPosRankSum=-0.991;VQSLOD=2.4134;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:19,17:36:51.07:120,0,51	0/1:5,1:8:36.21:36,0,38	0/0:33,0:18:0:0,0,0	./.	0/1:8,4:12:13.25:39,0,13	1/1:11,9:20:9.03:134,9,0	0/1:16,10:26:73.97:132,0,74	1/1:17,0:17:8.50:74,9,0	0/1:19,2:21:25.11:118,0,25	1/1:20,0:20:15.90:170,16,0	1/1:25,1:26:9:94,9,0	0/0:12,0:12:8.87:0,9,98	0/0:17,0:18:23.81:0,24,205	0/1:7,6:14:21.09:161,0,21	1/1:17,3:20:5.57:166,6,0	0/0:19,0:21:25.84:0,26,239	1/1:18,4:37:22.82:421,23,0	0/1:8,1:18:20.57:86,0,21	1/1:11,4:14:10.86:82,11,0	1/1:15,13:28:2.78:258,3,0	0/1:9,7:19:9.35:81,0,9	0/1:20,0:24:11.65:12,0,68	0/1:10,2:13:25.16:35,0,25	0/0:16,0:16:17.98:0,18,163	0/1:7,8:17:22.51:159,0,23	0/1:13,1:14:3.71:81,0,4	0/1:16,0:16:29.88:73,0,30	0/1:3,7:9:9.77:122,0,10
chr10	54569190	.	A	AAG	4450.02	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=-1.425;DP=542;FS=0.840;HRun=0;HaplotypeScore=100.2373;InbreedingCoeff=0.9330;MQ=68.00;MQ0=14;MQRankSum=-0.424;QD=15.08;ReadPosRankSum=-2.725;VQSLOD=4.2868;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:18.82:0,19,145	0/0:6,0:6:8.95:0,9,68	0/0:31,0:17:41.89:0,42,424	0/0:27,0:15:26.13:0,26,278	1/1:21,0:21:48.10:376,48,0	1/1:14,0:14:32.62:268,33,0	1/1:26,0:26:59.53:473,60,0	1/1:20,0:20:59.96:529,60,0	1/1:14,0:14:32.13:232,32,0	1/1:21,0:21:56.70:482,57,0	1/1:21,0:20:35.33:266,35,0	0/0:14,0:14:29.97:0,30,265	0/0:17,0:17:44.67:0,45,368	1/1:10,0:10:17.74:146,18,0	1/1:20,0:20:35.96:265,36,0	0/0:23,0:21:53.60:0,54,424	0/0:31,0:28:51.82:0,52,396	0/0:13,0:10:17.49:0,17,139	1/1:14,0:14:35.13:276,35,0	1/1:9,13:21:8.70:123,9,0	1/1:5,20:26:5.75:68,6,0	0/0:16,0:16:35.81:0,36,297	0/0:10,0:10:27:0,27,296	0/0:40,0:40:89.30:0,89,758	1/1:22,0:22:52.49:417,52,0	1/1:17,0:17:47.73:411,48,0	1/1:20,0:20:3.84:41,4,0	1/1:7,0:7:8.06:76,8,0
chr10	54569191	.	AGT	A	500.47	PASS	AB=0.945;AC=20;AF=0.435;AN=46;BaseQRankSum=3.144;DP=565;FS=10.432;HRun=0;HaplotypeScore=102.1301;InbreedingCoeff=0.1329;MQ=65.00;MQ0=15;MQRankSum=-0.135;QD=1.73;ReadPosRankSum=0.427;VQSLOD=1.2720;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:5.72:0,6,33	./.	0/0:30,0:16:0.47:0,0,1	./.	0/1:21,1:22:16.88:27,0,17	./.	1/1:23,1:26:8.84:70,9,0	./.	1/1:12,3:15:9.02:97,9,0	1/1:18,1:21:5.22:40,5,0	1/1:16,4:19:6.49:65,6,0	0/0:15,0:15:6.02:0,6,88	0/1:16,1:17:20.22:20,0,59	1/1:10,0:10:3:30,3,0	1/1:17,4:21:12.03:129,12,0	0/0:27,0:25:0:0,0,0	0/0:35,0:32:9.38:0,9,62	0/0:14,0:11:5.98:0,6,59	0/1:16,0:16:13.50:13,0,56	0/1:20,1:20:20.21:20,0,84	0/1:28,1:28:22.93:46,0,23	0/0:16,0:16:15.04:0,15,199	0/0:11,0:11:15:0,15,196	0/1:38,2:41:7.35:7,0,340	0/1:20,2:22:5.87:56,0,6	./.	0/0:1,0:19:6.45:0,6,48	0/1:7,1:8:4.72:25,0,5
chr10	54569726	.	ATGTG	A	12458.22	PASS	AB=0.525;AC=25;AF=0.446;AN=56;BaseQRankSum=6.507;DP=825;FS=0.615;HRun=0;HaplotypeScore=153.6361;InbreedingCoeff=0.9274;MQ=59.40;MQ0=5;MQRankSum=0.934;QD=34.23;ReadPosRankSum=2.737;VQSLOD=4.5985;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:30:70.42:0,70,1558	0/0:20,0:20:57.20:0,57,1347	0/0:44,0:38:48.22:0,48,1313	0/0:36,0:27:66.22:0,66,1460	1/1:1,22:23:54.18:933,54,0	1/1:3,27:30:72.25:1239,72,0	1/1:6,14:20:27.09:466,27,0	1/1:10,21:31:63.15:992,63,0	1/1:0,29:29:69.24:1181,69,0	1/1:5,32:37:96.30:1622,96,0	1/1:1,22:23:51.17:877,51,0	0/0:43,0:43:99:0,105,2537	0/0:29,0:32:86.87:0,87,2009	1/1:3,25:28:60.20:1037,60,0	1/1:5,23:25:48.16:827,48,0	0/0:26,0:26:75.26:0,75,1893	0/0:26,0:27:72.02:0,72,1690	0/0:28,0:29:78.04:0,78,1800	0/0:2,0:13:25.56:0,26,154	0/0:1,0:29:67.10:0,67,303	0/0:4,1:49:43.46:0,43,366	0/0:31,0:32:87.09:0,87,2057	0/0:20,0:20:45.15:0,45,1107	0/0:27,0:28:78.06:0,78,1868	1/1:1,25:25:54.18:930,54,0	1/1:6,34:40:99:1678,99,0	0/1:3,3:31:56.59:57,0,218	1/1:4,14:18:36.12:617,36,0
chr10	54570717	.	AT	A	7614.88	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=13.381;DP=539;FS=9.484;HRun=1;HaplotypeScore=52.3329;InbreedingCoeff=0.9701;MQ=66.57;MQ0=0;MQRankSum=-1.429;QD=32.82;ReadPosRankSum=-0.116;VQSLOD=3.3417;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,123,1640	0/0:12,0:12:35.69:0,36,419	0/0:5,0:5:8.23:0,8,129	0/0:6,0:5:14.21:0,14,114	1/1:0,35:34:90.01:1111,90,0	1/1:0,9:9:27.09:375,27,0	1/1:0,7:7:18.06:250,18,0	1/1:1,25:24:69.13:800,69,0	1/1:0,13:13:27.09:375,27,0	1/1:0,27:27:74.97:990,75,0	1/1:0,20:20:56.98:695,57,0	0/0:11,0:11:33.11:0,33,468	0/0:13,0:13:39.13:0,39,555	1/1:0,15:14:39.13:541,39,0	1/1:0,17:17:45.15:626,45,0	0/0:18,0:18:54.10:0,54,678	0/0:30,0:30:87.19:0,87,1119	0/0:16,0:16:48.14:0,48,656	0/0:26,0:26:72.21:0,72,966	0/0:23,0:23:66.16:0,66,869	0/0:15,0:15:39.07:0,39,515	0/0:20,0:20:60.20:0,60,856	0/0:27,0:27:81.21:0,81,1082	0/0:20,1:21:16.40:0,16,746	1/1:1,30:31:60.16:811,60,0	1/1:0,27:27:75.18:958,75,0	0/0:22,0:22:66.14:0,66,845	1/1:0,5:5:6.02:83,6,0
chr10	54571291	.	GCCATGACACCTGTGACCA	G	2931.94	PASS	AC=18;AF=0.346;AN=52;BaseQRankSum=7.947;DP=791;FS=1.997;HRun=0;HaplotypeScore=322.8390;InbreedingCoeff=0.8483;MQ=67.09;MQ0=8;MQRankSum=0.230;QD=13.39;ReadPosRankSum=0.901;VQSLOD=1.7650;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:78.25:0,78,3479	0/0:7,0:7:12.04:0,12,413	0/0:41,0:26:22.82:0,23,281	0/0:35,0:16:15.42:0,15,286	0/0:13,12:24:1.25:0,1,3	1/1:12,0:12:12.04:268,12,0	1/1:22,0:22:2.66:24,3,0	1/1:19,0:19:6.01:56,6,0	./.	1/1:19,18:36:45.13:718,45,0	1/1:7,10:17:1.18:121,1,0	0/0:30,0:30:54.17:0,54,2585	0/0:33,0:33:66.19:0,66,3165	1/1:17,26:43:8.98:389,9,0	1/1:10,28:38:21.07:721,21,0	0/0:34,0:34:63.20:0,63,3124	0/0:35,0:35:72.23:0,72,3780	0/0:18,0:18:24.08:0,24,1396	0/0:23,0:23:27.08:0,27,1419	0/0:12,0:12:12.04:0,12,402	0/0:74,0:74:99:0,169,8365	0/0:22,0:22:42.12:0,42,904	0/0:16,0:16:24.08:0,24,986	0/0:36,0:36:60.17:0,60,3514	./.	1/1:10,14:24:30.04:416,30,0	0/0:18,0:18:36.11:0,36,1481	1/1:1,6:7:9.03:404,9,0
chr10	54572103	.	CT	C	6287.06	PASS	AB=0.909;AC=34;AF=0.607;AN=56;BaseQRankSum=11.791;DP=505;FS=4.452;HRun=10;HaplotypeScore=56.3618;InbreedingCoeff=0.8487;MQ=74.54;MQ0=0;MQRankSum=0.712;QD=21.17;ReadPosRankSum=0.476;VQSLOD=5.8170;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,99,1068	0/0:11,0:11:24.02:0,24,252	0/1:9,1:10:15:15,0,116	0/1:9,1:10:28.79:29,0,140	1/1:0,21:21:53.97:469,54,0	1/1:1,18:19:50.99:443,51,0	1/1:1,13:14:35.99:313,36,0	1/1:4,22:26:62.96:543,63,0	1/1:1,15:16:41.99:364,42,0	1/1:2,16:18:25.04:391,25,0	1/1:1,9:10:26.99:234,27,0	0/0:14,1:15:16.05:0,16,398	0/0:16,0:16:34.34:0,34,368	1/1:0,10:10:29.99:260,30,0	1/1:0,23:23:65.99:573,66,0	0/0:25,0:25:65.90:0,66,713	0/0:32,0:32:90.21:0,90,977	0/0:13,0:13:36.10:0,36,398	1/1:3,19:22:53.96:469,54,0	1/1:0,13:13:38.99:339,39,0	1/1:0,12:12:26.99:234,27,0	0/0:15,0:15:45.11:0,45,491	0/0:22,0:22:60.12:0,60,642	0/0:23,0:23:63.13:0,63,684	1/1:6,24:30:68.12:597,68,0	1/1:1,22:23:65.99:573,66,0	1/1:1,13:14:32.99:285,33,0	1/1:0,6:6:18:156,18,0
chr10	54573379	.	GGGGGGA	G	1510.05	PASS	AB=0.985;AC=10;AF=0.192;AN=52;BaseQRankSum=3.639;DP=338;FS=40.726;HRun=0;HaplotypeScore=86.0438;InbreedingCoeff=0.0802;MQ=73.80;MQ0=5;MQRankSum=-1.041;QD=11.19;ReadPosRankSum=3.058;VQSLOD=0.5374;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:7:15.02:0,15,335	./.	0/0:48,0:21:49.17:0,49,1102	0/0:37,0:23:18.67:0,19,486	0/0:6,0:6:2.55:0,3,24	0/0:5,0:4:9.02:0,9,144	0/1:13,0:13:29.72:30,0,151	0/1:9,0:9:0.95:64,0,1	0/0:9,0:9:9.54:0,10,102	0/1:4,0:4:10.05:41,0,10	./.	0/0:15,0:15:34.63:0,35,745	0/0:10,0:10:18.49:0,18,392	0/1:8,0:8:15.23:15,0,66	0/0:7,0:7:18.04:0,18,258	0/0:3,0:3:6.02:0,6,113	0/0:3,0:3:6.02:0,6,133	0/0:5,0:5:9.02:0,9,213	0/1:20,1:21:15.99:529,0,16	0/1:18,0:18:16.83:240,0,17	1/1:24,2:26:35.01:273,35,0	0/0:9,0:9:18.06:0,18,489	0/0:8,0:8:9.02:0,9,162	0/0:19,0:19:44.17:0,44,1174	0/1:12,0:12:62.17:73,0,62	0/0:7,0:7:6.80:0,7,49	0/1:22,2:23:2.62:386,0,3	0/0:2,0:2:2.86:0,3,28
chr10	54573381	.	GGGGA	G	2950.25	PASS	AB=1.000;AC=24;AF=0.444;AN=54;BaseQRankSum=2.100;DP=340;FS=45.089;HRun=0;HaplotypeScore=71.6412;InbreedingCoeff=0.5263;MQ=72.40;MQ0=4;MQRankSum=-0.622;QD=17.88;ReadPosRankSum=1.009;VQSLOD=1.3222;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:8:17.97:0,18,261	./.	0/0:48,0:22:53.01:0,53,838	0/0:36,0:24:1.90:0,2,331	1/1:6,0:6:0.47:1,0,0	0/0:5,0:4:6:0,6,68	0/1:13,0:13:33.96:34,0,58	1/1:10,0:10:19.30:137,19,0	0/1:8,0:8:20.20:20,0,22	1/1:7,0:7:17.20:136,17,0	1/1:4,0:4:5.90:41,6,0	0/0:14,0:14:33:0,33,529	0/0:9,0:9:16.68:0,17,218	0/1:7,0:7:15.85:20,0,16	0/0:7,0:7:14.28:0,14,106	0/0:3,0:3:6.01:0,6,64	0/0:3,0:3:5.95:0,6,87	0/0:5,0:5:9.02:0,9,158	1/1:4,18:22:56.86:716,57,0	1/1:0,18:18:41.75:600,42,0	1/1:4,21:25:35.68:538,36,0	0/0:9,0:9:18.06:0,18,336	0/0:7,0:7:9.02:0,9,113	0/0:19,0:19:39.56:0,40,793	0/1:11,0:11:18.63:97,0,19	1/1:9,0:9:10.69:107,11,0	1/1:3,20:23:42.04:670,42,0	1/1:2,0:2:1.62:21,2,0
chr10	54573384	.	GA	G	2133.57	PASS	AB=0.769;AC=33;AF=0.611;AN=54;BaseQRankSum=2.839;DP=333;FS=23.657;HRun=1;HaplotypeScore=62.9312;InbreedingCoeff=0.8376;MQ=74.54;MQ0=3;MQRankSum=-2.523;QD=11.53;ReadPosRankSum=-0.291;VQSLOD=0.3253;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:19.24:0,19,169	./.	0/0:41,1:22:35.99:0,36,599	0/0:36,0:25:31.58:0,32,308	1/1:8,0:8:8.64:74,9,0	1/1:6,0:5:7.24:55,7,0	1/1:8,0:8:12.35:90,12,0	1/1:12,0:12:29.06:220,29,0	1/1:7,2:9:12.44:97,12,0	1/1:2,5:7:20.79:156,21,0	1/1:3,0:3:8.90:67,9,0	0/0:14,0:14:33.44:0,33,309	0/0:7,0:7:8.68:0,9,79	1/1:7,1:8:11.99:102,12,0	1/1:6,0:6:10.74:77,11,0	0/0:3,0:3:8.96:0,9,70	0/0:3,0:3:5.95:0,6,49	0/0:6,0:6:14.93:0,15,119	1/1:19,0:19:55.76:369,56,0	1/1:18,0:18:38.21:200,38,0	1/1:25,0:25:33.88:175,34,0	0/1:7,3:10:3.83:4,0,168	0/0:8,1:9:11.97:0,12,97	0/0:17,1:18:38.87:0,39,411	1/1:12,0:12:25.14:193,25,0	1/1:10,0:10:22.56:208,23,0	1/1:22,0:21:39.98:207,40,0	1/1:2,0:2:5.97:45,6,0
chr10	54575072	.	A	AT	319.93	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-5.604;DP=552;FS=2.042;HRun=9;HaplotypeScore=73.4554;InbreedingCoeff=0.7985;MQ=76.02;MQ0=2;MQRankSum=-0.688;QD=16.84;ReadPosRankSum=0.005;VQSLOD=3.8355;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:83.95:0,84,729	1/1:2,4:6:6.02:66,6,0	0/0:18,0:16:23.93:0,24,203	0/0:16,0:14:13.70:0,14,192	0/0:24,0:24:59.95:0,60,516	0/0:26,0:26:71.98:0,72,625	0/0:21,0:21:56.96:0,57,490	0/0:29,0:29:62.93:0,63,537	0/0:20,0:20:49.93:0,50,441	0/0:22,0:22:50.98:0,51,443	0/0:15,0:15:41.97:0,42,361	0/0:25,0:25:65.98:0,66,573	0/0:12,0:12:26.99:0,27,234	0/0:22,0:22:62.96:0,63,543	0/0:12,0:12:32.98:0,33,286	1/1:2,11:13:33.09:365,33,0	0/0:30,0:30:71.97:0,72,625	0/0:32,0:32:86.93:0,87,748	0/0:16,0:17:47.03:0,47,396	0/0:16,0:16:44.95:0,45,382	0/0:22,0:22:59.98:0,60,521	0/0:14,0:13:29.98:0,30,260	0/0:16,1:18:10.82:0,11,308	0/0:24,2:26:0.13:0,0,455	0/0:20,0:20:50.98:0,51,440	0/0:16,0:16:41.99:0,42,365	0/0:17,0:17:38.96:0,39,334	0/0:10,0:10:26.99:0,27,234
chr10	54575757	.	A	AG	18518.08	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=-10.772;DP=684;FS=3.954;HRun=4;HaplotypeScore=64.4719;InbreedingCoeff=0.9970;MQ=82.35;MQ0=0;MQRankSum=-5.421;QD=35.89;ReadPosRankSum=2.316;VQSLOD=5.4888;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,51:56:99:1822,135,0	1/1:0,11:11:30.10:410,30,0	0/0:24,0:24:57.11:0,57,609	0/0:19,0:19:49.60:0,50,548	1/1:1,32:33:93.17:1225,93,0	1/1:1,25:26:72.24:984,72,0	1/1:1,23:24:63.21:861,63,0	1/1:1,19:20:57.19:779,57,0	1/1:1,29:30:81.27:1106,81,0	1/1:2,21:23:63.21:862,63,0	1/1:1,13:14:33.04:428,33,0	0/0:25,0:25:75.20:0,75,841	0/0:21,0:21:60.15:0,60,668	1/1:2,16:18:39.13:528,39,0	1/1:1,16:17:48.16:656,48,0	1/1:2,22:24:54.18:737,54,0	1/1:2,22:24:51.17:697,51,0	1/1:0,18:18:54.18:738,54,0	1/1:0,25:25:75.22:992,75,0	1/1:0,35:35:90.30:1229,90,0	1/1:2,36:38:99:1394,102,0	0/0:30,0:30:81.21:0,81,908	0/0:24,0:24:66.65:0,67,741	0/0:25,0:25:75.19:0,75,832	1/1:0,16:16:45.15:615,45,0	1/1:1,31:32:93.31:1270,93,0	1/1:1,26:27:71.98:979,72,0	1/1:0,5:5:15.05:205,15,0
chr10	54576078	.	TTTTTGTTTTG	T	2212.66	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=8.534;DP=634;FS=20.549;HRun=0;HaplotypeScore=185.3634;InbreedingCoeff=0.9590;MQ=62.65;MQ0=4;MQRankSum=-6.223;QD=25.73;ReadPosRankSum=-0.125;VQSLOD=1.3801;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,102,4753	0/0:9,0:9:21.07:0,21,986	0/0:21,0:17:27.08:0,27,614	0/0:19,0:13:15.01:0,15,298	0/0:29,0:28:54.16:0,54,2462	0/0:24,0:24:51.16:0,51,2305	0/0:19,0:19:36.12:0,36,1735	0/0:35,0:35:48.15:0,48,1719	0/0:15,0:15:36.12:0,36,1580	0/0:22,0:23:48.15:0,48,1761	0/0:16,0:16:32.90:0,33,1308	0/0:20,0:20:45.14:0,45,1929	0/0:13,0:13:30.10:0,30,1262	0/0:21,0:21:45.15:0,45,2014	0/0:27,0:27:60.20:0,60,2827	0/0:23,0:23:42.14:0,42,1905	0/0:30,0:30:70.77:0,71,3069	0/0:23,0:23:57.17:0,57,2214	1/1:16,5:21:15.02:309,15,0	1/1:6,16:23:39:864,39,0	1/1:11,3:14:5.98:110,6,0	0/0:19,0:19:36.12:0,36,1664	0/0:26,0:26:64.46:0,64,2862	0/0:22,0:22:39.13:0,39,1566	0/0:21,0:21:39.13:0,39,1415	0/0:33,0:33:74.06:0,74,3107	1/1:7,21:28:35.63:1082,36,0	0/0:16,0:15:42.14:0,42,1935
chr10	54576371	.	T	TCA	3141.13	PASS	AB=1.000;AC=43;AF=0.768;AN=56;BaseQRankSum=6.788;DP=715;FS=32.524;HRun=0;HaplotypeScore=163.5060;InbreedingCoeff=0.7200;MQ=55.47;MQ0=18;MQRankSum=-5.236;QD=6.16;ReadPosRankSum=1.734;VQSLOD=1.7590;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:37,0:34:0.42:1,0,0	1/1:9,0:9:5.94:42,6,0	0/0:42,0:25:8.96:0,9,63	0/1:44,0:31:5.23:5,0,133	1/1:12,6:16:6.02:85,6,0	1/1:11,5:15:12.01:141,12,0	1/1:23,3:21:20.93:211,21,0	1/1:31,6:34:56.61:607,57,0	1/1:10,10:19:2.47:46,2,0	1/1:20,3:22:10.23:237,10,0	1/1:9,8:17:12.03:167,12,0	0/0:32,0:32:45.03:0,45,514	0/0:26,0:25:42.10:0,42,483	1/1:21,3:23:17.98:232,18,0	1/1:16,6:21:12.03:167,12,0	1/1:22,1:20:5.83:56,6,0	1/1:21,0:21:14.88:165,15,0	1/1:19,0:18:19.40:171,19,0	1/1:10,0:8:11.77:78,12,0	1/1:18,0:22:9.87:76,10,0	1/1:43,0:36:11.91:87,12,0	0/0:26,0:26:42.13:0,42,499	0/0:25,0:23:38.84:0,39,422	0/0:53,0:53:86.56:0,87,997	1/1:15,8:23:9.03:142,9,0	1/1:22,4:22:3.90:348,4,0	1/1:21,0:22:17.12:119,17,0	1/1:3,2:5:14.96:141,15,0
chr10	54576390	.	CAG	C	1557.67	PASS	AB=0.978;AC=38;AF=0.679;AN=56;BaseQRankSum=3.576;DP=866;FS=1.506;HRun=0;HaplotypeScore=175.0249;InbreedingCoeff=0.2317;MQ=37.96;MQ0=100;MQRankSum=-5.617;QD=2.31;ReadPosRankSum=-4.868;VQSLOD=1.3634;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:47,3:40:8.99:74,9,0	1/1:15,0:12:3.27:24,3,0	0/1:21,0:6:10.49:10,0,25	0/1:29,0:16:97.17:104,0,97	1/1:22,1:18:2.33:11,2,0	1/1:14,2:15:8.87:60,9,0	1/1:34,1:21:4.73:82,5,0	1/1:59,2:35:22.32:300,22,0	0/1:22,0:17:3.03:12,0,3	0/1:33,0:27:16.08:144,0,16	0/1:14,2:14:4.44:18,0,4	0/0:36,0:32:47.65:0,48,677	0/0:24,0:22:48.07:0,48,733	1/1:22,1:21:3.87:42,4,0	1/1:21,3:21:2.63:25,3,0	0/1:24,1:17:24.74:25,0,41	1/1:24,2:21:28.36:177,28,0	1/1:21,2:17:29.84:164,30,0	0/1:17,0:10:35.34:38,0,35	1/1:31,2:29:9.46:107,9,0	1/1:70,1:32:6.58:78,7,0	0/0:35,0:33:60.09:0,60,938	0/0:33,0:28:19.20:0,19,593	0/0:65,0:60:64.82:0,65,1392	1/1:35,0:28:1.69:12,2,0	0/1:39,1:29:53.93:54,0,101	1/1:22,5:24:6.92:91,7,0	1/1:7,1:6:12.59:80,13,0
chr10	54576404	.	CAG	C	809.14	PASS	AB=0.943;AC=27;AF=0.482;AN=56;BaseQRankSum=5.798;DP=865;FS=0.529;HRun=0;HaplotypeScore=172.6795;InbreedingCoeff=-0.0293;MQ=33.07;MQ0=133;MQRankSum=-5.974;QD=1.34;ReadPosRankSum=-5.193;VQSLOD=0.9903;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:39,2:30:0:0,0,0	1/1:18,1:15:7.58:41,8,0	1/1:5,0:1:1.55:4,2,0	0/1:17,0:7:9.57:10,0,33	1/1:23,0:17:2.06:10,2,0	1/1:16,0:16:5.22:35,5,0	0/1:35,0:18:6.01:6,0,22	0/1:64,0:25:62.79:106,0,63	0/0:22,0:14:3:0,3,28	0/1:34,4:28:62.03:85,0,62	0/0:18,0:16:5.48:0,5,28	0/0:32,0:28:32.83:0,33,518	0/0:28,0:26:2.50:0,3,393	0/1:23,1:22:13.74:22,0,14	0/0:23,0:19:1.35:0,1,4	0/1:30,0:21:13.06:13,0,109	1/1:22,0:17:22.69:116,23,0	1/1:20,0:14:3.99:65,4,0	0/1:17,0:8:18.03:58,0,18	0/1:33,4:32:34.96:71,0,35	0/1:70,1:26:29.82:30,0,43	0/0:38,0:34:55.37:0,55,959	0/0:37,0:32:18.41:0,18,461	0/0:63,1:56:75.63:0,76,1464	1/1:36,4:31:0.05:10,0,0	0/1:42,2:30:88.27:154,0,88	0/1:27,5:29:8.33:122,0,8	0/1:5,2:5:0.43:5,0,0
chr10	54576406	.	G	GAC	843.57	PASS	AB=0.961;AC=18;AF=0.360;AN=50;BaseQRankSum=4.495;DP=873;FS=5.748;HRun=0;HaplotypeScore=172.7100;InbreedingCoeff=0.0822;MQ=32.64;MQ0=134;MQRankSum=-6.456;QD=1.97;ReadPosRankSum=-2.810;VQSLOD=1.8838;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:36,0:27:0:0,0,0	0/0:21,0:18:1.03:0,1,6	./.	0/0:16,0:6:0.75:0,1,2	./.	0/1:16,1:17:10.98:11,0,12	1/1:31,2:17:3:31,3,0	0/1:65,0:24:49.75:145,0,50	0/1:21,0:13:0.01:0,0,0	0/1:35,1:29:67.17:129,0,67	./.	0/0:30,0:26:23.96:0,24,273	0/0:28,0:26:13.71:0,14,213	1/1:22,2:22:5.82:72,6,0	0/0:21,3:20:1.36:0,1,3	0/0:30,0:21:6.14:0,6,88	0/1:22,0:17:2.39:27,0,2	0/1:21,0:14:7.55:24,0,8	0/1:17,3:9:25.22:135,0,25	0/0:31,5:31:2.69:0,3,30	0/0:67,3:26:3.01:0,3,31	0/0:39,0:35:45.42:0,45,564	0/0:37,0:33:29.95:0,30,337	0/0:63,0:55:86.58:0,87,1012	1/1:41,5:35:5.92:42,6,0	0/1:40,3:30:69.72:254,0,70	0/1:28,3:28:58.06:104,0,58	1/1:6,1:5:2.03:4,2,0
chr10	54576418	.	CAG	C	651.81	PASS	AB=0.977;AC=23;AF=0.479;AN=48;BaseQRankSum=6.898;DP=944;FS=3.597;HRun=0;HaplotypeScore=183.7121;InbreedingCoeff=-0.1100;MQ=27.94;MQ0=152;MQRankSum=-4.531;QD=1.06;ReadPosRankSum=-2.322;VQSLOD=2.5242;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:33,2:24:0:0,0,0	1/1:23,1:20:6.42:34,6,0	./.	./.	./.	0/1:16,0:16:8.98:9,0,27	0/1:40,0:20:2:10,0,2	0/1:63,0:19:44.75:45,0,68	1/1:21,0:12:0.47:1,0,0	0/1:60,0:40:99:137,0,231	./.	0/0:35,0:30:21.65:0,22,384	0/1:30,0:27:17.11:17,0,315	1/1:23,1:23:5.42:32,5,0	1/1:21,0:17:0.45:1,0,0	0/1:31,3:24:6.87:7,0,106	0/1:24,0:16:3.74:55,0,4	0/1:19,2:14:6.71:107,0,7	0/1:25,0:10:20.35:20,0,121	0/1:39,1:33:20.61:21,0,40	0/0:73,0:29:2.76:0,3,57	0/0:43,0:39:45.61:0,46,726	0/0:42,0:35:24.81:0,25,426	0/0:69,0:58:68.27:0,68,1363	1/1:55,2:44:5.41:49,5,0	0/1:46,0:28:99:163,0,129	0/1:31,2:30:54.10:80,0,54	0/0:10,0:8:0.65:0,1,10
chr10	54576430	.	CAG	C	796.14	PASS	AB=0.973;AC=23;AF=0.500;AN=46;BaseQRankSum=4.832;DP=992;FS=0.000;HRun=0;HaplotypeScore=183.8786;InbreedingCoeff=-0.2446;MQ=27.06;MQ0=161;MQRankSum=-4.830;QD=1.21;ReadPosRankSum=-0.830;VQSLOD=2.5591;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	1/1:27,0:22:10.64:69,11,0	./.	./.	./.	0/1:21,0:21:9.06:9,0,10	0/1:37,2:18:1.25:36,0,1	1/1:45,4:8:18.86:179,19,0	0/0:26,0:17:1.18:0,1,3	0/1:64,3:46:99:171,0,269	./.	0/1:36,0:31:15.96:16,0,262	0/1:35,0:32:18.45:18,0,337	1/1:26,1:24:3.78:20,4,0	0/0:23,0:18:0.26:0,0,1	0/1:30,3:26:13.47:13,0,92	0/1:21,1:14:32.30:32,0,46	0/1:19,1:13:7.08:67,0,7	0/1:29,0:12:35.90:36,0,111	1/1:37,2:32:2.13:31,2,0	0/0:71,1:30:2.73:0,3,24	0/1:48,0:44:10.79:11,0,503	0/0:42,0:35:2.39:0,2,365	0/0:72,0:59:39.19:0,39,1079	1/1:64,3:51:2.39:23,2,0	0/1:54,0:33:98:98,0,108	0/1:31,2:29:3.08:85,0,3	0/1:11,0:9:13.46:13,0,28
chr10	54576432	.	GAC	G	492.78	PASS	AB=0.968;AC=19;AF=0.452;AN=42;BaseQRankSum=4.540;DP=1004;FS=2.551;HRun=0;HaplotypeScore=186.9243;InbreedingCoeff=-0.3194;MQ=27.05;MQ0=162;MQRankSum=-4.149;QD=0.87;ReadPosRankSum=0.229;VQSLOD=2.4452;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/1:24,4:23:16.93:28,0,17	./.	./.	./.	0/0:21,0:21:2.13:0,2,31	0/1:40,0:18:5.32:26,0,5	0/1:51,0:12:59.83:114,0,60	1/1:25,0:17:1.97:11,2,0	0/1:70,0:50:73.65:74,0,310	./.	0/1:32,4:31:17.01:17,0,227	0/1:33,3:33:82.11:82,0,340	1/1:27,0:24:0.41:1,0,0	0/0:23,0:18:0.88:0,1,2	0/0:32,0:25:9.08:0,9,82	0/1:23,0:15:5.73:6,0,53	0/1:20,0:13:13.41:16,0,13	0/1:30,0:12:42.31:42,0,65	0/1:38,0:31:7.38:7,0,18	./.	0/0:45,2:43:23.77:0,24,438	0/1:35,5:33:10.20:10,0,314	0/0:72,2:61:56.12:0,56,891	./.	0/1:56,0:34:15.38:15,0,131	1/1:33,0:29:24.18:153,24,0	0/1:11,0:9:18.37:18,0,28
chr10	54576442	.	C	CAG	188.03	PASS	AB=0.968;AC=15;AF=0.313;AN=48;BaseQRankSum=2.778;DP=1037;FS=5.913;HRun=0;HaplotypeScore=190.8734;InbreedingCoeff=0.0742;MQ=26.68;MQ0=167;MQRankSum=-4.120;QD=0.37;ReadPosRankSum=0.281;VQSLOD=2.1909;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:42,0:33:0:0,0,0	0/0:31,0:26:17.43:0,17,89	./.	./.	./.	0/0:21,1:21:6.26:0,6,57	0/1:45,0:22:8.07:8,0,21	0/0:51,0:16:27.23:0,27,224	0/0:28,2:21:5.64:0,6,25	0/1:68,4:50:40.42:40,0,586	./.	0/0:36,0:30:33.81:0,34,359	0/0:41,0:37:39.85:0,40,493	1/1:33,0:26:0.22:1,0,0	1/1:23,1:17:2.21:8,2,0	0/0:35,0:27:15.49:0,15,91	0/0:24,0:14:19.96:0,20,117	0/1:22,0:16:19.72:20,0,65	0/1:26,0:11:10.48:10,0,88	0/1:35,0:28:6.33:6,0,40	0/1:69,0:30:0:0,0,0	0/0:51,0:46:47.69:0,48,569	0/0:40,0:33:32.75:0,33,416	0/0:77,0:61:83.84:0,84,1054	1/1:64,4:52:0.47:1,0,0	0/1:51,6:35:99:206,0,304	0/0:32,0:28:5.54:0,6,125	0/1:8,1:8:1.44:1,0,25
chr10	54576450	.	CACAT	C	1316.46	PASS	AB=0.970;AC=26;AF=0.542;AN=48;BaseQRankSum=6.601;DP=1018;FS=1.934;HRun=0;HaplotypeScore=189.1974;InbreedingCoeff=-0.0187;MQ=27.00;MQ0=150;MQRankSum=-7.812;QD=1.87;ReadPosRankSum=-2.044;VQSLOD=2.6267;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:30:0.79:0,1,2	0/1:27,0:23:0.49:17,0,0	./.	./.	./.	1/1:20,2:21:2.85:36,3,0	1/1:45,0:21:5.63:42,6,0	0/1:47,0:17:68.74:187,0,69	1/1:29,1:21:2.01:26,2,0	0/1:68,2:47:99:260,0,224	./.	0/0:35,0:29:21.95:0,22,511	0/0:43,0:37:15.70:0,16,655	1/1:33,0:26:0.50:1,1,0	1/1:23,0:16:0.47:1,0,0	0/1:34,0:26:7.17:7,0,26	0/1:23,0:12:12.41:37,0,12	0/1:20,0:15:44.91:60,0,45	0/1:19,3:8:41.35:161,0,41	0/1:30,2:25:2.87:4,0,3	1/1:59,2:28:1.25:3,1,0	0/1:52,0:47:9.79:10,0,555	0/0:42,0:34:11.62:0,12,524	0/0:80,0:64:57.05:0,57,1196	0/1:65,3:54:0:0,0,0	0/1:55,1:37:25.72:229,0,26	1/1:19,11:26:17.89:297,18,0	0/1:8,1:9:5.15:73,0,5
chr10	54576452	.	CAT	C	1228.76	PASS	AB=0.978;AC=21;AF=0.438;AN=48;BaseQRankSum=7.650;DP=995;FS=11.604;HRun=0;HaplotypeScore=175.2055;InbreedingCoeff=-0.1127;MQ=27.04;MQ0=144;MQRankSum=-7.268;QD=1.95;ReadPosRankSum=-0.223;VQSLOD=1.7607;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,1:28:0.79:0,1,2	1/1:22,4:22:11.43:53,11,0	./.	./.	./.	0/1:22,0:21:6.80:25,0,7	0/1:47,0:23:0.89:11,0,1	0/1:46,0:17:95.35:182,0,95	1/1:29,1:21:2.27:29,2,0	0/1:67,1:46:99:228,0,186	./.	0/0:35,1:30:1.33:0,1,376	0/1:43,1:38:49.92:50,0,500	0/0:31,0:24:0.05:0,0,0	0/0:21,0:16:0.31:0,0,1	0/1:30,3:25:8.30:8,0,43	0/1:21,1:12:11.76:46,0,12	0/1:17,1:14:30.67:57,0,31	0/1:22,0:8:43.52:73,0,44	0/0:25,5:24:3.56:0,4,13	0/0:58,0:29:0.01:0,0,1	0/1:49,0:45:21.39:21,0,426	0/1:41,0:34:2.45:2,0,353	0/0:78,0:63:59.38:0,59,937	0/1:64,4:53:0:0,0,0	1/1:52,1:35:23.72:321,24,0	1/1:29,1:26:31.24:203,31,0	0/1:10,0:9:2.43:44,0,2
chr10	54576454	.	TAC	T	859.97	PASS	AB=0.926;AC=19;AF=0.413;AN=46;BaseQRankSum=4.716;DP=988;FS=7.899;HRun=0;HaplotypeScore=173.7826;InbreedingCoeff=0.1330;MQ=27.26;MQ0=137;MQRankSum=-6.862;QD=1.76;ReadPosRankSum=0.719;VQSLOD=1.9184;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:24,0:21:4.36:0,4,23	./.	./.	./.	0/1:21,2:22:10.81:11,0,13	0/0:45,1:23:2.11:0,2,7	0/1:44,0:17:74.75:129,0,75	1/1:29,1:21:1.86:11,2,0	0/1:59,7:46:99:207,0,238	./.	0/0:36,0:30:29.90:0,30,482	0/1:43,0:38:9.66:10,0,571	1/1:29,2:24:0.43:1,0,0	1/1:20,0:15:2.36:8,2,0	0/0:30,1:26:1.57:0,2,4	0/1:19,0:9:4.61:5,0,74	0/0:18,0:14:4.06:0,4,96	1/1:20,0:8:11.94:90,12,0	0/1:24,7:25:0.01:0,0,0	0/0:58,0:28:0.89:0,1,2	0/0:52,0:48:37.63:0,38,493	0/0:42,0:35:26.90:0,27,378	0/0:81,0:65:65.99:0,66,891	0/1:59,7:51:0.02:0,0,0	0/1:48,6:37:99:219,0,145	1/1:25,5:27:21.48:259,21,0	0/1:9,1:9:8.25:41,0,8
chr10	54576466	.	CAT	C	620.39	PASS	AB=0.970;AC=20;AF=0.400;AN=50;BaseQRankSum=8.336;DP=1072;FS=14.403;HRun=0;HaplotypeScore=184.0831;InbreedingCoeff=0.2197;MQ=26.68;MQ0=129;MQRankSum=-6.208;QD=1.22;ReadPosRankSum=-0.591;VQSLOD=1.7964;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:33,1:25:0:0,0,0	1/1:20,2:18:12.26:53,12,0	./.	./.	./.	0/0:27,0:23:2.70:0,3,35	0/0:42,0:21:2.75:0,3,23	0/0:50,0:22:18.13:0,18,154	1/1:34,0:24:4.84:19,5,0	0/1:75,2:56:99:143,0,311	0/0:29,2:27:0:0,0,0	0/0:42,2:37:31.70:0,32,587	0/1:43,4:41:83.61:84,0,714	0/0:40,0:32:2.33:0,2,17	0/0:28,0:22:0.30:0,0,1	1/1:32,2:25:5.99:35,6,0	0/1:18,0:9:5.76:45,0,6	0/1:18,1:14:31.56:32,0,55	1/1:17,0:7:5.16:39,5,0	0/1:33,1:27:0.05:0,0,0	1/1:61,0:32:0.89:3,1,0	0/0:41,7:45:28.51:0,29,398	0/0:38,2:32:27.08:0,27,434	0/0:81,1:64:66.01:0,66,953	0/0:71,4:60:0.02:0,0,1	0/1:60,1:44:90.71:91,0,362	1/1:39,0:34:20.30:186,20,0	0/1:9,0:8:27.11:32,0,27
chr10	54576468	.	TAC	T	134.44	PASS	AB=0.935;AC=8;AF=0.167;AN=48;BaseQRankSum=4.154;DP=1073;FS=16.776;HRun=0;HaplotypeScore=185.0318;InbreedingCoeff=-0.0485;MQ=26.49;MQ0=124;MQRankSum=-2.400;QD=0.44;ReadPosRankSum=1.159;VQSLOD=2.0224;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:36,0:26:0:0,0,0	0/0:22,0:18:2.87:0,3,19	./.	./.	./.	0/0:24,2:22:5.97:0,6,67	0/0:45,0:22:2.90:0,3,36	0/0:48,0:22:50.68:0,51,477	0/0:28,4:23:0.85:0,1,3	0/1:71,4:54:9.66:10,0,697	0/0:31,0:27:0:0,0,0	0/0:46,0:39:43.42:0,43,422	0/1:47,0:40:10.55:11,0,553	0/0:39,3:32:5.33:0,5,53	0/0:29,0:21:0:0,0,0	0/0:33,0:25:2.92:0,3,20	0/1:20,0:10:4.96:5,0,79	0/0:19,0:14:1.81:0,2,69	0/1:18,1:8:28.38:28,0,31	0/0:32,2:27:0:0,0,0	./.	0/0:47,0:43:20.07:0,20,202	0/0:41,0:33:27.07:0,27,306	0/0:78,0:60:63.06:0,63,673	0/0:67,6:58:0.13:0,0,1	0/1:56,4:43:24.21:24,0,721	0/1:25,13:34:27.52:121,0,28	0/1:9,1:9:41.38:43,0,41
chr10	54576474	.	CACACAG	C	173.99	PASS	AB=0.995;AC=10;AF=0.200;AN=50;BaseQRankSum=6.582;DP=1130;FS=13.122;HRun=0;HaplotypeScore=210.9934;InbreedingCoeff=0.1560;MQ=26.04;MQ0=134;MQRankSum=-3.424;QD=0.43;ReadPosRankSum=1.100;VQSLOD=1.8236;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:29:0:0,0,0	0/0:24,0:20:3.30:0,3,64	./.	./.	./.	0/0:26,0:22:6.02:0,6,82	0/0:53,0:26:3.13:0,3,10	0/0:54,0:23:17.91:0,18,436	0/1:31,0:22:0.92:1,0,2	0/1:83,0:58:30.04:30,0,645	0/0:36,0:31:0.47:0,0,1	0/0:49,1:43:25.14:0,25,1277	0/1:47,2:42:32.70:33,0,1404	0/0:44,0:32:7.63:0,8,94	0/0:31,0:23:2.94:0,3,18	0/0:34,0:24:0.23:0,0,2	0/0:20,0:10:4.97:0,5,111	0/0:16,0:14:17.80:0,18,171	0/1:17,0:8:0.44:10,0,0	0/1:37,0:31:0.02:0,0,1	1/1:71,0:32:1.55:5,2,0	0/0:43,1:40:20.56:0,21,534	0/0:39,1:31:27.07:0,27,636	0/0:77,2:61:60.52:0,61,1522	0/1:73,0:58:0.37:1,0,0	0/0:63,0:44:33.74:0,34,757	0/1:36,0:33:26.62:162,0,27	0/1:10,0:9:39.74:41,0,40
chr10	54576478	.	CAG	C	143.25	PASS	AB=0.997;AC=15;AF=0.300;AN=50;BaseQRankSum=6.562;DP=1116;FS=12.961;HRun=0;HaplotypeScore=185.8457;InbreedingCoeff=-0.0692;MQ=26.02;MQ0=129;MQRankSum=-3.862;QD=0.27;ReadPosRankSum=-1.807;VQSLOD=1.8899;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:45,0:30:0:0,0,0	0/1:22,0:19:15.69:16,0,31	./.	./.	./.	0/0:26,0:22:6.02:0,6,73	0/0:52,0:26:2.69:0,3,19	0/0:52,0:23:35.72:0,36,629	0/1:30,0:22:1.41:1,0,2	0/1:81,0:56:29.24:29,0,680	0/0:35,1:31:0:0,0,0	0/0:51,0:44:59.81:0,60,752	0/1:48,1:42:1:1,0,774	0/0:44,0:32:5.78:0,6,71	0/0:33,0:24:2.94:0,3,18	0/1:31,0:23:0.88:1,0,1	0/1:20,0:10:22.12:22,0,109	0/1:17,0:14:31.62:32,0,61	0/1:21,0:8:1.51:2,0,54	0/1:39,1:32:0.03:0,0,0	1/1:66,0:29:0.47:2,0,0	0/0:42,0:38:19.61:0,20,311	0/0:39,0:31:27.02:0,27,393	0/0:73,0:57:59.70:0,60,897	0/0:69,1:56:0.07:0,0,1	0/1:64,0:43:28.54:29,0,801	0/1:35,0:32:40.86:59,0,41	0/1:11,0:10:37.47:64,0,37
chr10	54576480	.	G	GAC	49.99	PASS	AB=0.983;AC=13;AF=0.260;AN=50;BaseQRankSum=5.289;DP=1124;FS=56.782;HRun=0;HaplotypeScore=187.4484;InbreedingCoeff=0.1828;MQ=25.91;MQ0=132;MQRankSum=-3.577;QD=0.11;ReadPosRankSum=-1.525;VQSLOD=0.5832;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,1:31:0:0,0,0	0/0:22,0:19:4.85:0,5,44	./.	./.	./.	0/0:24,0:22:5.81:0,6,55	0/1:53,0:26:0:1,0,0	0/0:53,0:22:39.08:0,39,451	0/0:30,0:22:2.74:0,3,7	0/1:83,0:56:7.12:7,0,502	0/1:36,0:31:0:0,0,0	0/0:51,0:44:56.62:0,57,654	0/0:49,0:43:47.80:0,48,633	0/0:43,0:32:2.19:0,2,62	0/0:33,0:24:3:0,3,28	1/1:21,8:22:4.51:54,5,0	0/1:18,1:10:14.33:14,0,75	0/1:15,2:14:46.74:47,0,54	0/0:22,0:9:14.88:0,15,133	0/1:38,0:31:0:0,0,0	0/1:70,0:31:0:1,0,0	0/0:45,0:41:14.19:0,14,223	0/0:41,0:31:17.89:0,18,213	0/0:73,0:56:53.99:0,54,648	1/1:65,0:55:2.90:17,3,0	0/0:65,0:44:20.59:0,21,608	0/1:33,0:31:10.87:11,0,69	0/1:10,0:9:17.69:18,0,37
chr10	54576486	.	CACACAG	C	326.67	PASS	AB=0.996;AC=14;AF=0.280;AN=50;BaseQRankSum=6.237;DP=1124;FS=40.749;HRun=0;HaplotypeScore=195.7462;InbreedingCoeff=-0.0350;MQ=25.61;MQ0=143;MQRankSum=-4.801;QD=0.65;ReadPosRankSum=-1.038;VQSLOD=1.3744;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:33:0:0,0,0	0/0:20,0:18:4.06:0,4,49	./.	./.	./.	0/0:24,0:20:5.98:0,6,57	0/0:52,0:24:0.88:0,1,2	0/1:60,0:22:23.15:23,0,327	0/1:28,0:20:0.99:11,0,1	0/1:83,0:56:99:204,0,281	0/0:37,0:31:0.47:0,0,1	0/0:52,0:46:57.06:0,57,1456	0/1:46,2:42:1.37:1,0,1543	0/0:47,0:33:10.66:0,11,108	0/0:35,0:26:3.01:0,3,33	1/1:28,0:21:1.94:5,2,0	0/1:19,0:10:8.10:8,0,137	0/0:16,0:14:0.45:0,0,77	0/1:24,0:9:27.46:27,0,95	0/1:39,0:31:0.02:0,0,1	1/1:71,0:28:1.55:5,2,0	0/0:44,1:41:18.53:0,19,567	0/0:40,1:29:21.07:0,21,522	0/0:70,0:54:54.62:0,55,1455	0/0:67,0:53:1.67:0,2,5	0/1:66,0:43:55.64:56,0,608	0/1:30,0:27:32:79,0,32	0/1:10,0:9:25.46:25,0,46
chr10	54576488	.	CACAG	C	483.65	PASS	AB=0.937;AC=14;AF=0.280;AN=50;BaseQRankSum=6.235;DP=1115;FS=24.657;HRun=0;HaplotypeScore=183.1670;InbreedingCoeff=0.2581;MQ=25.54;MQ0=144;MQRankSum=-3.950;QD=1.02;ReadPosRankSum=-3.166;VQSLOD=0.6563;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:49,0:34:0:0,0,0	0/0:20,0:18:1.71:0,2,46	./.	./.	./.	0/0:21,2:19:3.01:0,3,36	0/0:50,0:22:0.47:0,0,1	0/0:57,0:20:41.58:0,42,420	1/1:27,1:20:0.21:14,0,0	0/1:78,3:54:99:182,0,337	0/0:36,2:32:0:0,0,0	0/0:51,0:45:31.78:0,32,1184	0/0:47,1:42:32.81:0,33,1222	0/0:44,3:33:6.26:0,6,74	0/0:34,0:26:3.01:0,3,33	0/1:28,0:21:0.57:1,0,13	0/0:18,0:9:3.28:0,3,166	0/0:16,0:14:12.93:0,13,63	0/0:23,0:9:7.96:0,8,123	0/1:33,6:31:0.02:0,0,0	1/1:72,0:27:1.55:5,2,0	0/0:42,1:39:20.81:0,21,490	0/0:41,0:28:20.56:0,21,424	0/0:69,1:54:54.61:0,55,1155	1/1:61,7:53:2.12:17,2,0	0/1:65,3:44:40.23:40,0,635	1/1:24,5:27:7.53:267,8,0	0/1:8,2:9:11.08:78,0,11
chr10	54576492	.	GACACAC	G	776.65	PASS	AB=0.988;AC=9;AF=0.180;AN=50;BaseQRankSum=2.929;DP=1081;FS=33.473;HRun=0;HaplotypeScore=180.8943;InbreedingCoeff=0.0249;MQ=25.48;MQ0=147;MQRankSum=-4.498;QD=2.11;ReadPosRankSum=-0.110;VQSLOD=1.0457;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:33:1.25:0,1,3	0/0:16,0:15:6.43:0,6,47	./.	./.	./.	0/0:22,0:18:5.98:0,6,57	0/0:46,1:22:0.88:0,1,2	0/1:67,0:18:99:113,0,357	0/0:28,0:20:2.01:0,2,7	0/1:79,1:51:99:344,0,347	0/0:37,0:32:0.47:0,0,1	0/0:48,0:43:60.33:0,60,1482	0/0:47,0:41:55.19:0,55,1688	0/0:45,0:31:10.49:0,10,93	0/0:33,0:25:5.60:0,6,40	0/0:26,0:20:3.30:0,3,18	0/0:17,0:9:8.23:0,8,118	0/0:15,0:12:14.37:0,14,128	0/1:23,2:9:65.91:66,0,126	0/1:35,0:30:0.05:0,0,1	0/0:73,0:25:0:0,0,1	0/0:41,0:38:21.07:0,21,574	0/0:37,0:26:21.06:0,21,518	0/0:68,0:53:48.54:0,49,1319	1/1:63,2:51:0.41:2,0,0	0/1:60,0:38:99:226,0,530	0/1:28,0:26:48.74:107,0,49	0/1:8,0:7:31.67:32,0,73
chr10	54576496	.	C	CAG	171.97	PASS	AB=0.982;AC=11;AF=0.220;AN=50;BaseQRankSum=2.597;DP=1079;FS=14.296;HRun=0;HaplotypeScore=166.4172;InbreedingCoeff=0.0766;MQ=25.41;MQ0=154;MQRankSum=-4.009;QD=0.38;ReadPosRankSum=-1.180;VQSLOD=2.0746;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:50,0:33:2.58:10,3,0	0/0:16,0:15:6.44:0,6,65	./.	./.	./.	0/0:20,2:18:5.83:0,6,64	0/0:47,0:22:0.18:0,0,1	0/1:73,0:17:56.49:56,0,326	0/0:29,0:21:2.74:0,3,8	0/1:76,2:49:55.91:56,0,575	0/1:36,0:31:0:0,0,0	0/0:48,0:43:60.08:0,60,817	0/0:47,0:40:54.47:0,54,845	0/0:44,1:31:5.07:0,5,100	0/0:31,0:23:5.60:0,6,42	0/0:28,0:20:1.34:0,1,3	0/0:17,0:9:8.91:0,9,122	0/0:16,0:13:7.72:0,8,133	0/1:27,0:12:15.28:15,0,197	0/1:33,2:30:0.04:0,0,0	0/0:76,0:28:1.82:0,2,5	0/0:41,0:38:20.79:0,21,320	0/0:39,0:28:21.06:0,21,297	0/0:67,0:52:47.92:0,48,662	0/1:61,1:50:0.09:0,0,0	0/1:54,2:35:99:121,0,383	0/1:26,1:25:1.26:1,0,66	0/1:9,0:8:23.28:23,0,71
chr10	54576504	.	GAC	G	252.90	PASS	AB=0.915;AC=14;AF=0.269;AN=52;BaseQRankSum=3.945;DP=990;FS=0.000;HRun=0;HaplotypeScore=145.2185;InbreedingCoeff=0.1595;MQ=25.38;MQ0=143;MQRankSum=-4.901;QD=0.65;ReadPosRankSum=-0.632;VQSLOD=2.5549;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:33:1.52:0,2,4	0/0:13,0:12:0.38:0,0,1	./.	./.	0/0:33,9:32:0:0,0,0	0/1:14,4:14:0.03:0,0,0	0/0:42,3:22:0.42:0,0,1	1/1:69,1:13:6.01:58,6,0	0/1:22,4:19:0:0,0,0	0/1:65,8:42:99:205,0,350	0/0:25,6:27:0:0,0,0	0/0:41,0:36:50.66:0,51,721	0/0:45,0:39:61.67:0,62,891	1/1:38,3:28:3.78:35,4,0	1/1:29,3:24:1.03:3,1,0	0/0:26,0:18:3.48:0,3,46	0/1:17,0:9:1.29:1,0,18	0/0:15,0:12:5.05:0,5,87	0/1:26,1:13:15.84:16,0,172	0/0:28,3:26:5.73:0,6,52	0/0:75,2:29:1.55:0,2,4	0/0:34,1:32:18.06:0,18,301	0/0:38,0:27:15.05:0,15,247	0/0:59,0:47:38.90:0,39,582	0/0:42,12:43:0.60:0,1,1	0/1:50,3:34:18.24:18,0,312	0/1:18,5:21:22.98:23,0,51	0/1:8,0:7:12.32:12,0,56
chr10	54576506	.	C	CACAG	734.83	PASS	AB=0.952;AC=11;AF=0.212;AN=52;BaseQRankSum=2.670;DP=984;FS=9.195;HRun=0;HaplotypeScore=153.0063;InbreedingCoeff=0.0688;MQ=25.33;MQ0=148;MQRankSum=-4.867;QD=1.91;ReadPosRankSum=-1.090;VQSLOD=1.8797;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:32:2.63:0,3,10	0/0:13,0:12:0.47:0,0,1	./.	./.	0/1:38,1:31:0:0,0,0	0/1:16,0:14:0:0,0,0	1/1:46,0:23:2.41:13,2,0	0/1:69,0:12:25.96:26,0,76	0/0:25,1:19:1.75:0,2,5	0/1:70,3:43:99:554,0,316	0/1:28,4:28:0:0,0,0	0/0:40,0:35:56.41:0,56,891	0/0:44,0:38:15.86:0,16,975	0/0:37,2:27:3.05:0,3,29	0/0:29,2:23:5.01:0,5,26	0/0:26,0:18:1.72:0,2,4	0/1:17,0:9:8.53:9,0,37	0/0:15,0:12:0.67:0,1,117	0/0:26,0:12:6.50:0,7,228	0/0:29,0:26:5.41:0,5,61	0/0:78,0:28:0.47:0,0,1	0/0:34,0:31:18.06:0,18,341	0/0:37,0:26:20.90:0,21,333	0/0:58,0:46:38.90:0,39,657	0/0:50,1:42:2.57:0,3,13	0/1:51,1:35:99:233,0,378	0/1:22,0:21:3.30:3,0,112	0/1:8,0:7:3.25:3,0,86
chr10	54576514	.	CACAG	C	478.46	PASS	AB=0.991;AC=16;AF=0.320;AN=50;BaseQRankSum=4.512;DP=885;FS=8.630;HRun=0;HaplotypeScore=136.7167;InbreedingCoeff=-0.0027;MQ=25.26;MQ0=137;MQRankSum=-4.934;QD=1.24;ReadPosRankSum=-0.830;VQSLOD=1.5839;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,1:29:2.78:0,3,14	1/1:11,0:10:1.25:3,1,0	./.	./.	0/0:32,0:27:0:0,0,0	./.	1/1:38,1:18:1.23:8,1,0	0/1:68,0:6:12.61:53,0,13	0/1:25,0:19:0:0,0,0	0/1:69,1:42:99:233,0,290	0/0:30,1:27:0:0,0,0	0/0:35,1:32:45.23:0,45,1066	0/0:36,0:31:59.64:0,60,1183	1/1:35,0:24:0.03:52,0,0	1/1:30,1:22:0.83:2,1,0	0/0:21,0:13:2.19:0,2,17	0/1:13,0:7:17.87:18,0,48	0/1:15,0:12:19.41:19,0,79	0/0:21,0:10:8.44:0,8,174	0/0:21,4:22:2.86:0,3,60	0/0:77,0:26:3.09:0,3,18	0/0:29,0:27:18.06:0,18,443	0/0:30,0:20:15.05:0,15,387	0/0:52,1:43:28.07:0,28,773	0/0:47,0:38:3.02:0,3,15	0/1:47,3:31:99:152,0,476	0/1:21,0:20:47.42:47,0,55	0/1:8,0:7:11.45:11,0,28
chr10	54576516	.	CAG	C	385.14	PASS	AB=0.991;AC=18;AF=0.360;AN=50;BaseQRankSum=6.135;DP=841;FS=3.443;HRun=0;HaplotypeScore=125.2208;InbreedingCoeff=0.0831;MQ=25.31;MQ0=133;MQRankSum=-4.901;QD=0.94;ReadPosRankSum=0.040;VQSLOD=2.3696;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:26:1.52:0,2,4	1/1:11,0:10:1.55:4,2,0	./.	./.	0/0:30,1:26:0:0,0,0	./.	1/1:37,0:17:1.18:4,1,0	0/1:63,1:4:12.04:55,0,12	0/1:23,0:17:0:0,0,0	0/1:65,3:42:99:237,0,181	0/0:28,2:26:0:0,0,0	0/0:32,3:31:38.63:0,39,751	0/0:33,1:29:41.60:0,42,838	1/1:34,1:24:3.52:21,4,0	1/1:28,0:19:1.04:3,1,0	0/0:21,0:13:2.06:0,2,30	0/1:12,0:7:4.29:4,0,34	0/1:15,0:12:31.17:37,0,31	0/0:21,0:10:4.49:0,4,125	0/0:25,0:22:2.83:0,3,55	0/0:75,0:26:4.43:0,4,22	0/0:24,1:23:18.06:0,18,341	0/0:29,0:19:15.05:0,15,287	0/0:51,1:42:28.05:0,28,550	1/1:41,0:33:2.19:18,2,0	0/1:47,0:28:48.61:49,0,278	0/1:18,0:17:6.31:53,0,6	0/1:8,0:7:18.60:26,0,19
chr10	54576518	.	GAC	G	246.79	PASS	AB=0.945;AC=10;AF=0.200;AN=50;BaseQRankSum=4.033;DP=795;FS=6.206;HRun=0;HaplotypeScore=118.7464;InbreedingCoeff=0.1383;MQ=25.39;MQ0=127;MQRankSum=-5.736;QD=0.84;ReadPosRankSum=-0.991;VQSLOD=1.8449;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:22:1.52:0,2,4	0/0:11,0:10:0:0,0,0	./.	./.	0/0:26,4:25:0:0,0,0	./.	0/0:34,2:17:0.42:0,0,1	0/1:61,1:4:32.57:54,0,33	0/1:16,5:15:0:0,0,0	0/1:60,4:40:99:181,0,221	0/0:22,6:24:0:0,0,0	0/0:33,0:30:41.88:0,42,695	0/0:33,0:29:51:0,51,809	1/1:30,3:23:2.33:35,2,0	0/0:24,3:18:0:0,0,0	0/0:19,0:12:2.96:0,3,19	0/1:11,0:6:3.63:4,0,46	0/0:14,0:11:2.79:0,3,32	0/1:19,0:9:1.02:1,0,48	0/0:21,1:20:2.97:0,3,53	0/0:72,0:24:4.56:0,5,40	0/0:24,0:22:18.06:0,18,294	0/0:28,0:18:15.05:0,15,261	0/0:48,0:38:27.09:0,27,468	1/1:31,8:31:2.25:34,2,0	0/1:40,3:25:45.29:45,0,304	0/0:16,2:17:1.99:0,2,27	0/0:8,0:7:2.01:0,2,15
chr10	54576528	.	C	CAT	112.92	PASS	AB=0.950;AC=14;AF=0.280;AN=50;BaseQRankSum=4.420;DP=681;FS=21.649;HRun=0;HaplotypeScore=98.5497;InbreedingCoeff=0.2888;MQ=25.17;MQ0=112;MQRankSum=-2.840;QD=0.55;ReadPosRankSum=-0.652;VQSLOD=-0.2432;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:19:2.58:10,3,0	0/0:7,0:6:0:0,0,0	./.	./.	0/1:27,1:24:0:0,0,0	./.	0/1:31,0:16:0.06:1,0,0	0/0:60,0:4:9.03:0,9,131	0/1:16,0:12:0:0,0,0	0/0:55,0:32:45.47:0,45,545	0/1:24,0:20:0:0,0,0	0/0:31,0:28:42.31:0,42,582	0/0:28,0:25:52.27:0,52,650	0/0:26,3:20:2.02:0,2,69	1/1:25,0:17:1.24:3,1,0	1/1:10,0:5:2.58:13,3,0	0/1:8,0:4:9.46:9,0,39	0/1:11,0:10:8.57:9,0,24	0/0:20,0:6:11.17:0,11,84	0/0:19,0:18:2.78:0,3,46	0/0:62,0:22:3.01:0,3,46	0/0:18,0:16:12.03:0,12,163	0/0:25,0:16:12.04:0,12,183	0/0:39,1:32:27.06:0,27,370	0/0:33,0:26:0.41:0,0,1	0/0:36,0:18:23.75:0,24,365	0/1:12,2:13:13.33:104,0,13	0/1:4,0:4:1.66:74,0,2
chr10	54576538	.	G	GAC	87.64	PASS	AB=0.945;AC=19;AF=0.396;AN=48;BaseQRankSum=4.680;DP=554;FS=15.963;HRun=0;HaplotypeScore=81.1395;InbreedingCoeff=0.2612;MQ=25.25;MQ0=92;MQRankSum=-2.439;QD=0.31;ReadPosRankSum=-0.663;VQSLOD=0.0073;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:16:2.58:10,3,0	./.	./.	./.	0/1:19,0:18:0:0,0,0	./.	0/1:22,3:13:0:1,0,0	0/0:45,0:3:3.01:0,3,39	0/1:9,1:7:0:0,0,0	0/1:42,0:26:44.26:44,0,141	0/1:19,1:17:0:0,0,0	0/0:30,0:28:20.96:0,21,338	0/0:21,0:18:8.59:0,9,218	0/1:22,2:17:0.94:1,0,28	1/1:22,0:16:2.94:18,3,0	1/1:9,0:4:0.47:1,0,0	0/0:7,0:4:1.24:0,1,3	1/1:7,0:5:5.50:26,5,0	0/0:21,0:5:3:0,3,39	0/0:19,1:18:2.76:0,3,39	0/0:51,0:19:3:0,3,34	0/0:12,0:11:8.96:0,9,96	0/0:21,0:14:12.04:0,12,154	0/0:30,0:26:14.88:0,15,194	0/1:26,2:22:0:0,0,0	0/1:29,1:17:32.66:33,0,160	0/1:10,1:10:5.98:33,0,6	1/1:4,0:3:5.23:38,5,0
chr10	54576645	.	CAT	C	324.85	PASS	AB=0.825;AC=20;AF=0.400;AN=50;BaseQRankSum=6.073;DP=262;FS=5.086;HRun=0;HaplotypeScore=67.1830;InbreedingCoeff=0.6023;MQ=46.79;MQ0=28;MQRankSum=-4.654;QD=3.53;ReadPosRankSum=-1.881;VQSLOD=1.4605;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:8:2.94:0,3,24	0/0:3,0:3:2.60:0,3,10	0/0:26,0:5:15.05:0,15,278	0/0:36,0:10:12.71:0,13,249	./.	1/1:6,0:5:2.46:11,2,0	1/1:7,0:6:5.77:38,6,0	1/1:13,0:9:26.54:167,27,0	0/0:5,1:6:0:0,0,0	1/1:4,0:3:8.92:69,9,0	./.	0/0:17,0:17:26.75:0,27,467	0/0:14,0:12:27.55:0,28,452	0/0:2,0:2:0:0,0,0	0/1:2,1:3:0:0,0,0	0/0:4,0:4:2.08:0,2,50	0/0:5,0:5:1.14:0,1,99	0/0:3,1:3:9.03:0,9,170	1/1:15,1:5:11.03:80,11,0	1/1:3,0:3:2.96:19,3,0	0/1:24,3:21:0.01:0,0,0	0/0:11,0:11:12.04:0,12,232	0/0:10,0:10:12.04:0,12,189	0/0:15,1:16:23.93:0,24,371	1/1:6,1:7:5.47:16,5,0	1/1:5,0:4:8.90:60,9,0	./.	1/1:1,0:1:2.94:18,3,0
chr10	54576649	.	CAT	C	304.90	PASS	AB=0.938;AC=20;AF=0.400;AN=50;BaseQRankSum=6.323;DP=282;FS=10.576;HRun=0;HaplotypeScore=71.5937;InbreedingCoeff=0.5807;MQ=45.90;MQ0=31;MQRankSum=-4.656;QD=3.21;ReadPosRankSum=-2.035;VQSLOD=0.3458;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:8,1:9:2.96:0,3,57	0/0:3,0:3:3.01:0,3,38	0/0:29,0:5:15.05:0,15,289	0/0:41,0:10:3.14:0,3,269	./.	1/1:6,0:5:2.46:11,2,0	1/1:8,0:7:5.75:37,6,0	1/1:13,1:10:26:161,26,0	0/0:6,0:6:0:0,0,0	1/1:4,0:3:8.92:69,9,0	./.	0/0:18,0:18:29.76:0,30,490	0/0:14,0:12:33.11:0,33,601	0/0:2,0:2:0:0,0,0	0/1:4,0:4:0.02:0,0,0	0/0:4,0:4:2.08:0,2,55	0/0:6,0:6:1.31:0,1,121	0/0:4,0:3:9.03:0,9,173	1/1:14,1:5:11.58:81,12,0	1/1:3,0:3:1.55:4,2,0	0/1:24,4:21:0.01:0,0,0	0/0:11,0:11:12.04:0,12,232	0/0:10,0:10:12.04:0,12,216	0/0:18,1:19:32.99:0,33,611	1/1:7,0:7:5.47:16,5,0	1/1:5,0:4:8.90:60,9,0	./.	1/1:1,0:1:2.88:15,3,0
chr10	54576651	.	TAC	T	766.34	PASS	AB=0.847;AC=21;AF=0.420;AN=50;BaseQRankSum=5.909;DP=299;FS=14.801;HRun=0;HaplotypeScore=72.1283;InbreedingCoeff=0.5654;MQ=45.06;MQ0=30;MQRankSum=-5.214;QD=5.47;ReadPosRankSum=-1.863;VQSLOD=0.7719;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:2.96:0,3,52	0/0:3,0:3:3.01:0,3,49	0/0:35,0:5:15.05:0,15,249	0/1:44,0:11:2.63:3,0,225	./.	1/1:1,5:5:2.46:11,2,0	1/1:4,4:7:5.88:71,6,0	1/1:5,9:10:30.04:362,30,0	0/0:3,4:7:0:0,0,0	1/1:1,3:3:9.03:116,9,0	./.	0/0:19,0:18:29.77:0,30,501	0/0:15,0:13:36.11:0,36,574	0/0:0,2:2:0:0,0,0	0/1:2,2:4:0.02:0,0,0	0/0:4,0:4:2.08:0,2,49	0/0:6,0:6:1.36:0,1,125	0/0:4,0:3:9.03:0,9,153	1/1:12,3:6:15:167,15,0	1/1:1,2:3:2.98:22,3,0	0/1:24,4:21:0.01:0,0,0	0/0:14,0:14:18.03:0,18,254	0/0:9,0:9:12.04:0,12,204	0/0:20,0:20:32.99:0,33,552	1/1:3,4:7:5.47:16,5,0	1/1:2,4:4:9.03:117,9,0	./.	1/1:0,1:1:3.01:34,3,0
chr10	54576702	.	CAG	C	955.90	PASS	AB=0.907;AC=29;AF=0.537;AN=54;BaseQRankSum=8.600;DP=752;FS=21.085;HRun=0;HaplotypeScore=143.8760;InbreedingCoeff=0.2303;MQ=28.83;MQ0=87;MQRankSum=-6.097;QD=2.28;ReadPosRankSum=-2.295;VQSLOD=0.4991;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,1:19:8.52:0,9,133	1/1:15,1:13:2.85:17,3,0	0/0:46,0:5:10.89:0,11,200	0/0:71,1:7:15.94:0,16,251	0/0:19,3:18:3.01:0,3,34	1/1:6,0:11:4.40:17,4,0	0/1:23,3:20:14.30:14,0,46	0/1:45,2:19:15.15:124,0,15	1/1:18,1:18:13.52:49,14,0	0/1:28,1:19:35.68:140,0,36	./.	0/0:35,0:29:32.37:0,32,678	0/0:38,0:33:34.90:0,35,723	1/1:12,0:12:1.86:6,2,0	1/1:14,0:9:2.22:7,2,0	1/1:18,3:15:13.71:69,14,0	0/1:11,1:8:6.44:44,0,6	0/1:12,1:10:9.94:44,0,10	1/1:23,0:11:6.53:74,7,0	1/1:15,6:16:5.40:49,5,0	1/1:45,0:26:2.71:18,3,0	0/1:32,0:30:50.69:51,0,259	0/0:22,0:18:1.07:0,1,297	0/0:48,0:42:30.34:0,30,870	1/1:21,1:21:9.08:45,9,0	0/1:28,3:25:54.67:273,0,55	1/1:6,1:7:6.86:82,7,0	0/0:5,0:3:2.03:0,2,5
chr10	54576712	.	CAG	C	1449.74	PASS	AB=0.977;AC=31;AF=0.574;AN=54;BaseQRankSum=7.220;DP=773;FS=11.265;HRun=0;HaplotypeScore=154.6571;InbreedingCoeff=0.3049;MQ=30.20;MQ0=78;MQRankSum=-5.360;QD=3.16;ReadPosRankSum=-2.162;VQSLOD=1.5011;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:23:4.38:0,4,83	1/1:18,1:16:5.05:22,5,0	0/0:41,0:5:8.87:0,9,67	0/0:58,0:6:8.97:0,9,88	0/0:22,3:19:2.80:0,3,16	1/1:15,0:14:5.81:19,6,0	0/1:26,4:20:6.16:96,0,6	1/1:49,0:19:22.41:117,22,0	1/1:13,10:21:14.18:171,14,0	0/1:39,2:29:61.25:203,0,61	./.	0/0:34,0:28:13.90:0,14,418	0/0:39,0:33:26.77:0,27,603	1/1:13,4:15:5.63:64,6,0	1/1:14,3:12:3.01:42,3,0	1/1:22,1:17:8.33:49,8,0	0/1:13,0:10:21.96:22,0,73	0/1:14,0:12:9.31:80,0,9	0/1:23,0:15:1.01:100,0,1	1/1:23,0:18:5.40:49,5,0	1/1:37,2:22:5.49:41,5,0	0/1:32,0:30:27.01:27,0,277	0/0:23,0:18:3.64:0,4,299	0/0:51,0:45:39.32:0,39,877	1/1:22,5:21:9.33:50,9,0	1/1:34,7:31:15.79:366,16,0	0/1:7,0:7:5.84:43,0,6	1/1:4,2:4:5.95:58,6,0
chr10	54576714	.	GAC	G	310.01	PASS	AB=0.997;AC=25;AF=0.481;AN=52;BaseQRankSum=3.546;DP=768;FS=12.798;HRun=0;HaplotypeScore=157.3539;InbreedingCoeff=0.1941;MQ=30.46;MQ0=80;MQRankSum=-1.584;QD=0.71;ReadPosRankSum=-2.267;VQSLOD=0.9885;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:22:5.23:0,5,52	1/1:19,0:16:2.21:7,2,0	./.	0/1:56,0:6:0:0,0,0	1/1:26,0:20:0.72:2,1,0	0/1:15,0:14:0.58:1,0,30	1/1:31,0:21:5.53:42,6,0	0/0:49,0:19:3.41:0,3,19	1/1:24,0:22:11.34:96,11,0	0/1:40,0:29:28.89:29,0,62	./.	0/1:32,1:27:39.39:39,0,246	0/0:38,1:33:5.31:0,5,450	1/1:17,0:15:3.19:26,3,0	1/1:18,0:13:2.86:24,3,0	1/1:23,0:17:3.88:43,4,0	0/0:10,0:10:6.48:0,6,71	0/1:13,0:11:14.43:36,0,14	0/1:24,0:16:11.69:12,0,23	0/1:24,0:19:0:0,0,1	0/0:39,0:23:2.92:0,3,24	0/0:31,1:30:20.51:0,21,277	0/0:23,0:18:19.87:0,20,262	0/0:49,1:45:13.97:0,14,628	0/1:26,0:21:0.70:2,0,1	0/1:41,0:31:32.35:75,0,32	0/0:7,0:7:5.37:0,5,55	1/1:6,0:4:2.94:18,3,0
chr10	54576738	.	CACACAT	C	2557.85	PASS	AB=0.993;AC=36;AF=0.643;AN=56;BaseQRankSum=2.185;DP=710;FS=0.948;HRun=0;HaplotypeScore=184.9608;InbreedingCoeff=0.3038;MQ=39.30;MQ0=31;MQRankSum=-5.770;QD=5.10;ReadPosRankSum=-3.025;VQSLOD=2.0906;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:23:59.19:59,0,61	1/1:9,3:11:11.86:144,12,0	0/0:18,0:9:1.71:0,2,149	0/1:17,0:6:16.93:17,0,20	1/1:24,0:19:9.85:76,10,0	1/1:18,0:17:14.16:131,14,0	1/1:26,0:19:14.84:117,15,0	1/1:28,0:14:23.03:163,23,0	1/1:21,0:21:16.29:96,16,0	0/1:38,0:34:21.27:269,0,21	1/1:14,0:13:2.99:24,3,0	0/0:36,0:31:37.48:0,37,945	0/0:34,0:31:38.15:0,38,1078	1/1:27,0:25:28.66:199,29,0	1/1:23,0:19:14.05:81,14,0	1/1:21,3:22:26.16:325,26,0	0/1:18,0:16:20.31:125,0,20	0/1:18,0:17:14.67:93,0,15	0/1:22,0:17:13.88:118,0,14	0/1:20,0:17:9.99:38,0,10	1/1:31,0:28:21.79:165,22,0	0/0:31,0:29:42.03:0,42,800	0/0:23,0:20:21.04:0,21,512	0/0:66,0:60:99:0,99,1775	1/1:28,0:26:14.54:110,15,0	1/1:39,0:32:35.43:275,35,0	0/1:16,0:15:33.41:70,0,33	1/1:7,0:6:8.44:52,8,0
chr10	54576742	.	CAT	C	3905.30	PASS	AB=0.988;AC=43;AF=0.768;AN=56;BaseQRankSum=3.300;DP=696;FS=0.446;HRun=0;HaplotypeScore=151.8379;InbreedingCoeff=0.6447;MQ=40.56;MQ0=28;MQRankSum=-4.991;QD=7.37;ReadPosRankSum=-0.993;VQSLOD=3.1895;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:26,1:21:8.66:59,0,9	1/1:13,0:12:17.63:123,18,0	0/0:25,0:14:13.66:0,14,248	0/1:19,0:7:13.92:14,0,47	1/1:20,1:17:10.37:76,10,0	1/1:19,0:18:10.09:71,10,0	1/1:27,0:19:24.41:235,24,0	1/1:28,0:14:29.34:211,29,0	1/1:17,1:19:18.42:211,18,0	1/1:35,0:32:41.45:456,41,0	1/1:13,0:13:2.99:24,3,0	0/1:35,0:32:2.59:3,0,497	0/0:32,0:29:36.66:0,37,626	1/1:26,1:25:26.22:199,26,0	1/1:22,0:20:11.67:113,12,0	1/1:24,1:23:32.45:257,32,0	1/1:18,0:16:1.85:129,2,0	1/1:15,2:16:38.49:318,38,0	1/1:21,0:15:27.92:177,28,0	1/1:18,0:15:11.14:98,11,0	1/1:37,0:34:29.43:232,29,0	0/0:28,0:28:27.01:0,27,502	0/0:23,0:21:24.01:0,24,324	0/0:58,0:54:87.57:0,88,1188	1/1:28,1:27:14.65:107,15,0	1/1:38,0:32:52.94:549,53,0	1/1:16,0:15:11.75:161,12,0	1/1:6,0:5:8.96:84,9,0
chr10	54577972	.	CTAAA	C	2302.21	PASS	AC=26;AF=0.591;AN=44;BaseQRankSum=5.291;DP=301;FS=1.943;HRun=0;HaplotypeScore=52.5659;InbreedingCoeff=0.6349;MQ=73.67;MQ0=1;MQRankSum=1.682;QD=14.66;ReadPosRankSum=1.794;VQSLOD=2.6974;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,3:11:9.03:138,9,0	1/1:3,0:5:5.04:34,5,0	./.	./.	0/0:14,0:14:18.06:0,18,379	0/0:8,0:8:15.05:0,15,350	./.	0/0:33,0:32:4.26:0,4,43	0/0:6,0:7:3.01:0,3,52	0/0:7,0:7:3.01:0,3,70	0/0:10,0:10:3.01:0,3,70	1/1:4,3:7:6.02:92,6,0	1/1:3,4:7:12.04:184,12,0	1/1:8,1:9:9.03:135,9,0	./.	./.	1/1:12,21:33:51.17:781,51,0	1/1:10,12:22:27.09:414,27,0	1/1:14,0:15:3:28,3,0	./.	0/0:6,0:6:0.47:0,0,1	1/1:5,2:7:6.02:92,6,0	1/1:6,1:7:3.01:46,3,0	1/1:2,3:5:6.02:92,6,0	0/0:19,0:19:21.07:0,21,490	0/0:7,0:7:6.02:0,6,140	1/1:8,0:11:6.01:56,6,0	1/1:3,15:18:24.08:368,24,0
chr10	54580356	.	C	CA	1720.12	PASS	AB=0.938;AC=27;AF=0.500;AN=54;BaseQRankSum=2.002;DP=390;FS=0.000;HRun=11;HaplotypeScore=97.5256;InbreedingCoeff=-0.0500;MQ=34.86;MQ0=40;MQRankSum=-2.931;QD=5.36;ReadPosRankSum=-0.640;VQSLOD=1.6648;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:14,13:25:21.64:367,22,0	0/1:2,3:7:5.52:101,0,6	0/0:7,0:1:2.98:0,3,21	0/1:11,0:1:0:0,0,0	0/1:23,1:19:29.65:94,0,30	0/1:15,0:12:22.49:53,0,22	1/1:4,0:3:5.92:42,6,0	0/1:18,0:14:16.79:17,0,48	0/1:4,0:3:0:0,0,0	0/1:16,0:15:19.31:63,0,19	0/1:18,0:13:16.26:47,0,16	0/0:18,0:17:27.65:0,28,211	0/0:12,0:11:23.26:0,23,170	0/0:7,0:3:2.98:0,3,22	0/1:13,0:10:3.27:41,0,3	1/1:2,3:5:6.01:61,6,0	1/1:8,16:19:38.87:378,39,0	0/1:8,10:14:13.28:239,0,13	1/1:14,0:10:1.52:36,2,0	0/1:20,0:15:5.17:46,0,5	./.	0/0:9,0:9:17.93:0,18,139	0/0:15,0:14:25.71:0,26,191	0/1:15,1:14:6.40:6,0,139	0/1:16,0:13:19.88:59,0,20	0/1:26,0:24:60.25:153,0,60	1/1:16,0:13:1.48:11,1,0	0/1:7,0:4:3:58,0,3
chr10	54580371	.	A	AAC	768.55	PASS	AB=0.825;AC=16;AF=0.296;AN=54;BaseQRankSum=5.675;DP=345;FS=8.223;HRun=0;HaplotypeScore=107.7811;InbreedingCoeff=-0.1790;MQ=41.82;MQ0=25;MQRankSum=-5.263;QD=4.13;ReadPosRankSum=1.252;VQSLOD=1.8200;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:22:51.15:0,51,720	0/0:8,0:8:23.94:0,24,313	0/0:18,0:4:5.69:0,6,60	0/1:19,0:4:0.55:1,0,20	0/1:14,5:17:29.29:29,0,108	0/1:5,5:9:65.39:65,0,75	1/1:2,1:3:5.61:51,6,0	0/1:11,0:11:23.63:24,0,116	0/1:2,0:1:0:0,0,0	0/1:7,2:8:19.04:64,0,19	0/1:7,6:9:19.24:46,0,19	0/0:15,0:15:33.11:0,33,529	0/0:11,0:10:30.10:0,30,481	0/0:2,0:3:3:0,3,26	0/1:6,3:7:41.95:42,0,51	0/0:6,0:6:9:0,9,119	0/0:20,0:19:43.63:0,44,593	0/0:14,0:13:29.94:0,30,429	0/1:11,1:10:31.51:87,0,32	0/1:17,0:15:31.96:114,0,32	./.	0/0:6,0:6:15.05:0,15,243	0/0:14,0:14:36.12:0,36,564	0/0:18,0:16:39.12:0,39,590	0/1:5,6:8:64.94:99,0,65	0/1:11,4:17:91.15:133,0,91	0/1:15,0:14:31.96:33,0,32	0/1:3,3:4:3.65:130,0,4
chr10	54580379	.	AC	A	1780.23	PASS	AB=1.000;AC=31;AF=0.554;AN=56;BaseQRankSum=9.281;DP=358;FS=1.708;HRun=1;HaplotypeScore=108.8767;InbreedingCoeff=0.7450;MQ=41.90;MQ0=20;MQRankSum=-8.645;QD=9.52;ReadPosRankSum=-2.673;VQSLOD=0.3038;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:24:43.06:0,43,769	0/0:7,0:7:21.07:0,21,310	0/0:20,0:4:12.03:0,12,148	0/0:18,2:7:2.07:0,2,64	1/1:16,6:18:14.13:174,14,0	1/1:10,4:11:1.41:98,1,0	1/1:6,0:5:3.85:53,4,0	1/1:10,5:12:27.90:233,28,0	1/1:4,0:3:5.96:54,6,0	1/1:7,2:9:16.80:136,17,0	1/1:9,4:9:2.96:61,3,0	0/0:13,0:13:32.13:0,32,438	0/0:12,0:11:32.94:0,33,436	1/1:5,3:5:8.96:72,9,0	1/1:6,4:7:8.15:111,8,0	0/0:8,0:8:18.04:0,18,217	0/0:18,0:17:39.05:0,39,545	0/0:12,0:12:30.10:0,30,422	0/1:10,0:9:4.24:74,0,4	1/1:22,0:19:15.53:284,16,0	1/1:1,0:1:3.01:39,3,0	0/0:6,0:6:18.05:0,18,250	0/0:12,0:12:36.03:0,36,489	0/0:17,0:16:39.13:0,39,561	1/1:8,6:11:20.07:222,20,0	1/1:10,6:15:20.09:211,20,0	1/1:17,0:14:17.50:146,18,0	1/1:6,0:4:1.60:15,2,0
chr10	54580384	.	AC	A	1445.13	PASS	AB=0.864;AC=24;AF=0.429;AN=56;BaseQRankSum=9.191;DP=365;FS=1.079;HRun=1;HaplotypeScore=113.3941;InbreedingCoeff=0.3392;MQ=50.10;MQ0=17;MQRankSum=-8.515;QD=7.94;ReadPosRankSum=-0.586;VQSLOD=0.5938;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:26:45.09:0,45,777	0/0:7,0:7:21.07:0,21,304	0/0:21,0:5:14.61:0,15,123	0/0:27,0:12:21.14:0,21,198	1/1:13,6:15:4.92:163,5,0	1/1:12,2:12:6.63:101,7,0	0/1:5,1:5:25.83:26,0,40	1/1:15,1:13:6.77:147,7,0	1/1:3,1:4:3.72:47,4,0	0/1:7,1:8:11.57:100,0,12	0/1:11,3:10:0.30:76,0,0	0/0:14,0:14:41.57:0,42,491	0/0:13,0:12:32.94:0,33,442	1/1:6,2:5:8.34:51,8,0	0/1:7,3:7:15.17:95,0,15	0/0:8,0:8:18.06:0,18,258	0/0:17,0:16:39:0,39,551	0/0:12,0:12:27.09:0,27,398	0/1:5,3:8:45.18:66,0,45	1/1:12,8:17:7.78:249,8,0	1/1:0,1:1:3.01:35,3,0	0/0:7,0:7:21.02:0,21,270	0/0:13,0:13:39.04:0,39,509	0/0:17,0:16:39.13:0,39,567	0/1:13,3:13:22.26:157,0,22	0/1:17,0:16:28.92:125,0,29	1/1:10,6:13:14.19:180,14,0	0/1:5,0:4:12:12,0,65
chr10	54580388	.	AC	A	932.74	PASS	AB=0.878;AC=24;AF=0.429;AN=56;BaseQRankSum=8.940;DP=369;FS=9.105;HRun=1;HaplotypeScore=115.9737;InbreedingCoeff=0.3975;MQ=50.03;MQ0=16;MQRankSum=-9.350;QD=5.15;ReadPosRankSum=-1.894;VQSLOD=-0.7039;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:63.16:0,63,869	0/0:7,0:7:21.07:0,21,314	0/0:23,0:5:14.48:0,14,124	0/0:28,0:12:12.66:0,13,166	1/1:14,5:15:3.31:130,3,0	0/1:13,2:13:13.69:64,0,14	0/1:5,0:5:9.16:13,0,9	0/1:11,5:13:2.45:122,0,2	1/1:3,1:4:8.87:58,9,0	1/1:6,2:8:0.36:69,0,0	1/1:9,3:8:9.68:95,10,0	0/0:13,0:13:38.88:0,39,512	0/0:13,0:13:30.02:0,30,396	1/1:6,2:5:8.96:70,9,0	1/1:7,3:7:5.08:69,5,0	0/0:7,0:7:17.63:0,18,215	0/0:18,0:17:39.13:0,39,584	0/0:12,0:12:27.05:0,27,385	0/1:10,0:10:9.37:9,0,28	0/1:19,0:17:3.95:70,0,4	1/1:2,0:2:3.62:11,4,0	0/0:7,0:7:20.99:0,21,291	0/0:12,0:12:35.48:0,35,508	0/0:18,0:17:44.36:0,44,631	0/1:8,8:13:4.50:144,0,4	0/1:9,6:14:37.41:88,0,37	1/1:17,0:14:21.50:97,22,0	0/1:5,0:4:1.48:1,0,19
chr10	54580392	.	AC	A	1136.60	PASS	AB=0.987;AC=25;AF=0.446;AN=56;BaseQRankSum=8.602;DP=373;FS=7.308;HRun=1;HaplotypeScore=118.3568;InbreedingCoeff=0.2415;MQ=54.96;MQ0=15;MQRankSum=-8.256;QD=4.78;ReadPosRankSum=-1.586;VQSLOD=-0.4185;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:49.51:0,50,381	0/0:7,0:7:20.29:0,20,124	0/1:23,3:7:1.43:1,0,57	0/1:25,1:14:14.42:14,0,114	0/1:21,0:17:31.25:93,0,31	1/1:16,0:14:2.03:57,2,0	0/1:4,0:4:9.04:19,0,9	0/1:17,0:15:3.88:174,0,4	1/1:4,0:4:8.94:67,9,0	0/1:7,0:7:6.52:69,0,7	1/1:10,0:6:11.58:69,12,0	0/0:13,0:13:35.10:0,35,321	0/0:12,0:12:29.70:0,30,315	1/1:8,1:6:11.89:87,12,0	0/1:10,0:7:17.41:54,0,17	0/0:5,0:5:11.70:0,12,68	0/0:19,0:18:29.99:0,30,424	0/0:11,0:11:23.88:0,24,215	0/1:12,0:12:7.09:65,0,7	1/1:20,0:18:30.33:145,30,0	1/1:2,0:2:5.65:31,6,0	0/0:9,0:9:14.78:0,15,140	0/0:13,0:13:6.47:0,6,265	0/0:17,0:16:44.03:0,44,440	0/1:17,0:14:18.06:167,0,18	0/1:15,0:14:39.19:110,0,39	1/1:17,0:14:24.09:95,24,0	0/1:5,0:4:0.71:1,0,38
chr10	54580393	.	C	CA	1444.59	PASS	AB=0.960;AC=41;AF=0.732;AN=56;BaseQRankSum=5.187;DP=378;FS=8.360;HRun=12;HaplotypeScore=118.7628;InbreedingCoeff=0.3173;MQ=54.98;MQ0=14;MQRankSum=-6.943;QD=4.75;ReadPosRankSum=-2.106;VQSLOD=1.2139;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:13,16:30:33.18:382,33,0	1/1:3,4:7:18.01:165,18,0	0/0:25,0:7:13.45:0,13,78	0/1:26,0:14:11.08:11,0,83	1/1:16,1:16:25.17:128,25,0	0/1:14,0:15:1.76:19,0,2	1/1:3,1:4:7.36:63,7,0	1/1:14,1:15:9.52:84,10,0	1/1:3,1:4:6.03:21,6,0	1/1:5,2:7:14.96:92,15,0	1/1:9,0:6:9.11:48,9,0	0/1:12,1:13:6.88:7,0,127	0/0:12,0:12:29.72:0,30,211	1/1:8,0:6:1.25:10,1,0	1/1:8,0:7:7.83:54,8,0	1/1:0,5:5:12.02:117,12,0	0/0:19,0:18:34.29:0,34,240	0/1:11,0:11:7.88:8,0,73	0/1:11,0:12:9.43:25,0,9	1/1:16,0:18:9.54:65,10,0	1/1:2,0:2:4.53:15,5,0	0/1:8,1:10:28.80:29,0,34	0/1:12,2:15:28.23:28,0,120	0/0:18,0:17:34.94:0,35,243	1/1:13,0:14:17.25:75,17,0	1/1:14,1:14:19.81:98,20,0	1/1:14,0:14:9.61:49,10,0	1/1:5,0:4:5.64:27,6,0
chr10	54580399	.	A	ACCC	5318.41	PASS	AB=0.709;AC=21;AF=0.375;AN=56;BaseQRankSum=4.888;DP=408;FS=2.747;HRun=0;HaplotypeScore=120.7798;InbreedingCoeff=0.1223;MQ=63.38;MQ0=13;MQRankSum=-8.665;QD=24.85;ReadPosRankSum=1.054;VQSLOD=4.9331;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:63.19:0,63,880	0/0:8,0:8:24.08:0,24,365	0/0:31,0:11:27.09:0,27,422	0/0:26,0:15:22.12:0,22,423	0/1:9,6:15:65.43:426,0,65	1/1:6,1:17:21.06:301,21,0	0/1:5,0:6:55.79:104,0,56	0/1:11,8:20:78.90:707,0,79	1/1:1,2:4:9.03:154,9,0	0/1:4,2:8:99:226,0,104	1/1:9,2:8:21.07:348,21,0	0/0:13,0:13:39.13:0,39,700	0/0:12,0:12:33.11:0,33,613	1/1:6,3:6:12.04:202,12,0	0/1:10,1:10:99:191,0,114	0/0:7,0:7:15.05:0,15,224	0/0:19,0:18:39.13:0,39,720	0/0:9,0:9:17.86:0,18,323	0/1:7,3:14:74.18:420,0,74	0/1:9,0:20:83.18:544,0,83	1/1:2,0:5:6:119,6,0	0/0:10,0:10:30.10:0,30,497	0/0:14,0:14:42.14:0,42,713	0/0:18,0:17:48.16:0,48,883	0/1:10,8:16:49.45:516,0,49	0/1:8,6:19:77.66:564,0,78	0/1:13,0:19:48.80:438,0,49	0/1:4,0:5:61.20:61,0,94
chr10	54580578	.	GA	G	7026.02	PASS	AB=0.927;AC=34;AF=0.607;AN=56;BaseQRankSum=11.602;DP=579;FS=6.604;HRun=10;HaplotypeScore=65.3454;InbreedingCoeff=0.8451;MQ=76.79;MQ0=0;MQRankSum=-0.969;QD=18.59;ReadPosRankSum=0.956;VQSLOD=5.6147;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:66.16:0,66,721	0/0:5,0:5:12.03:0,12,133	0/1:16,2:17:26.75:27,0,188	0/1:20,1:21:22.24:22,0,191	1/1:2,22:24:59.98:520,60,0	1/1:2,22:24:35.78:539,36,0	1/1:0,19:19:50.99:443,51,0	1/1:7,18:25:53.97:469,54,0	1/1:1,15:16:41.67:349,42,0	1/1:0,17:17:47.99:417,48,0	1/1:2,18:20:47.97:416,48,0	0/0:25,0:25:60.13:0,60,640	0/0:18,1:19:22.04:0,22,450	1/1:0,17:17:35.99:312,36,0	1/1:1,22:23:59.99:521,60,0	0/0:21,1:23:40.01:0,40,638	0/0:33,0:33:90.21:0,90,977	0/0:13,0:13:39.09:0,39,421	1/1:2,13:15:35.96:308,36,0	1/1:5,23:28:62.88:533,63,0	1/1:5,21:26:53.97:469,54,0	0/0:22,0:22:49.67:0,50,589	0/0:17,0:17:29.24:0,29,419	0/0:16,0:16:42.09:0,42,453	1/1:0,14:14:24:208,24,0	1/1:3,27:30:80.91:694,81,0	1/1:3,27:30:65.97:573,66,0	1/1:1,10:11:23.97:208,24,0
chr10	54581849	.	T	TAC	423.26	PASS	AB=0.953;AC=10;AF=0.208;AN=48;BaseQRankSum=0.258;DP=328;FS=20.937;HRun=0;HaplotypeScore=52.9261;InbreedingCoeff=0.1106;MQ=52.36;MQ0=13;MQRankSum=-0.726;QD=4.07;ReadPosRankSum=-0.258;VQSLOD=0.4477;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:26:41.56:0,42,382	0/0:4,0:4:5.98:0,6,49	./.	./.	0/0:6,0:6:8.92:0,9,62	0/1:18,0:17:11.85:24,0,12	0/1:12,0:15:0:0,0,0	0/0:16,0:17:11.77:0,12,73	0/0:8,0:8:6.43:0,6,45	0/0:8,0:8:3.16:0,3,58	./.	0/0:14,0:13:11.28:0,11,111	0/0:7,0:7:9:0,9,87	0/0:6,0:6:8.93:0,9,65	./.	0/0:7,0:7:9:0,9,89	1/1:10,9:19:2.98:207,3,0	0/1:17,3:18:6.68:232,0,7	0/0:14,0:14:8.35:0,8,73	0/1:9,0:8:11.21:19,0,11	0/0:15,0:15:14.95:0,15,123	0/0:7,0:7:2.98:0,3,22	0/0:4,0:4:6.02:0,6,65	0/1:9,2:11:26.71:39,0,27	0/1:6,0:6:10.14:16,0,10	0/0:6,0:5:2.97:0,3,20	0/0:10,0:10:14.78:0,15,133	1/1:5,0:4:2.22:7,2,0
chr10	54581885	.	C	CATAT	515.97	PASS	AB=0.968;AC=9;AF=0.180;AN=50;BaseQRankSum=6.964;DP=270;FS=11.272;HRun=0;HaplotypeScore=62.7689;InbreedingCoeff=0.0152;MQ=54.29;MQ0=8;MQRankSum=-3.011;QD=5.93;ReadPosRankSum=-0.548;VQSLOD=0.5007;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:75.18:0,75,1244	0/0:4,0:4:12.04:0,12,205	./.	./.	0/1:8,0:7:36.87:37,0,119	0/1:16,0:16:61.04:107,0,61	0/1:7,0:7:0:0,0,0	0/1:29,0:29:99:281,0,365	0/0:4,0:4:6.96:0,7,79	0/1:5,2:7:89.34:89,0,144	0/0:3,0:2:3:0,3,25	0/0:11,0:10:22.32:0,22,389	0/0:12,0:12:30.08:0,30,447	0/0:6,0:6:9.39:0,9,99	./.	0/0:6,0:6:15.03:0,15,253	0/0:28,0:27:37.25:0,37,748	0/0:21,0:19:47.97:0,48,576	0/0:9,0:8:21.07:0,21,343	0/0:3,0:3:9.02:0,9,109	0/0:9,0:9:24.06:0,24,409	0/0:5,0:5:9.03:0,9,156	0/0:6,0:6:12.04:0,12,218	0/0:9,0:9:15:0,15,186	0/1:9,0:9:34.36:34,0,36	0/1:8,0:7:20.64:21,0,82	0/0:8,0:8:15.94:0,16,279	1/1:1,2:2:3.01:73,3,0
chr10	54581887	.	C	CATATAT	1324.15	PASS	AB=1.000;AC=16;AF=0.320;AN=50;BaseQRankSum=4.549;DP=258;FS=0.000;HRun=0;HaplotypeScore=75.5002;InbreedingCoeff=0.4814;MQ=58.53;MQ0=8;MQRankSum=-1.947;QD=14.39;ReadPosRankSum=-3.165;VQSLOD=1.6912;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:69.15:0,69,1391	0/0:4,0:4:12.01:0,12,146	./.	0/0:5,0:5:0.30:0,0,1	1/1:8,0:7:4.51:95,5,0	1/1:13,0:14:22.65:346,23,0	0/0:6,1:7:0.89:0,1,2	0/1:28,0:28:99:572,0,104	1/1:4,0:4:8.66:59,9,0	1/1:7,0:7:4.72:134,5,0	./.	0/0:10,0:9:21.06:0,21,404	0/0:12,0:12:26.98:0,27,557	0/1:5,0:5:12.25:60,0,12	./.	0/0:5,0:5:15.03:0,15,289	0/0:27,0:26:60.04:0,60,1042	0/0:20,0:18:50.47:0,50,806	0/0:9,0:8:21.03:0,21,352	0/0:2,0:2:6.02:0,6,100	0/0:9,0:9:19.83:0,20,286	0/0:4,0:5:9.02:0,9,165	0/0:6,0:6:12.04:0,12,288	0/0:9,0:9:12.04:0,12,233	1/1:1,6:9:3.01:100,3,0	0/1:8,0:7:6.49:49,0,6	0/1:6,0:6:0.27:0,0,332	1/1:3,0:2:3.01:62,3,0
chr10	54581906	.	C	CTA	618.61	PASS	AB=1.000;AC=20;AF=0.400;AN=50;BaseQRankSum=7.070;DP=217;FS=11.028;HRun=0;HaplotypeScore=51.6658;InbreedingCoeff=0.5487;MQ=69.89;MQ0=3;MQRankSum=-5.144;QD=7.54;ReadPosRankSum=-2.021;VQSLOD=1.0015;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:60.19:0,60,859	0/0:3,0:3:9.03:0,9,132	0/1:8,0:4:3.63:4,0,24	0/0:8,0:7:5.81:0,6,46	1/1:2,0:1:3:25,3,0	1/1:14,0:14:25.63:225,26,0	1/1:3,0:3:2.04:6,2,0	1/1:9,14:24:39.50:293,39,0	./.	1/1:2,0:2:5.99:51,6,0	./.	0/0:7,0:6:15.05:0,15,225	0/0:10,0:10:27.09:0,27,411	./.	0/1:1,0:1:0:0,0,0	0/0:6,0:6:18.06:0,18,273	0/0:26,0:25:66.23:0,66,868	0/0:18,0:17:27.42:0,27,505	0/1:8,0:8:37.63:38,0,55	0/0:2,0:2:2.97:0,3,20	0/1:5,0:5:11.07:11,0,33	0/0:8,0:8:21.07:0,21,311	0/0:4,0:4:12.03:0,12,163	0/0:8,0:8:12.01:0,12,159	1/1:8,0:8:7.78:44,8,0	1/1:4,0:4:8.39:61,8,0	0/0:9,0:9:14.81:0,15,105	1/1:3,0:3:3:26,3,0
chr10	54582217	.	TA	T	3757.27	PASS	AC=32;AF=0.593;AN=54;BaseQRankSum=6.775;DP=245;FS=0.565;HRun=8;HaplotypeScore=27.7144;InbreedingCoeff=0.8734;MQ=71.56;MQ0=0;MQRankSum=-1.092;QD=23.78;ReadPosRankSum=-2.165;VQSLOD=2.5898;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:51.16:0,51,616	0/0:2,0:2:5.99:0,6,58	0/0:3,0:3:5.80:0,6,42	0/0:5,0:5:4.38:0,4,61	1/1:2,7:9:18.02:174,18,0	1/1:0,9:9:24.04:232,24,0	1/1:1,5:6:9.01:87,9,0	1/1:6,24:30:72.08:688,72,0	1/1:1,11:12:27.04:261,27,0	1/1:0,6:6:18.03:174,18,0	1/1:0,3:3:9.01:87,9,0	0/0:7,0:7:18.06:0,18,217	0/0:9,0:9:27.08:0,27,326	1/1:1,10:11:27.04:261,27,0	1/1:0,4:4:12.02:116,12,0	0/0:5,0:5:15.05:0,15,181	0/0:16,0:16:42.13:0,42,507	0/0:18,0:18:48.15:0,48,580	1/1:0,8:8:24.04:230,24,0	1/1:0,8:8:24.04:232,24,0	1/1:0,6:6:15.02:145,15,0	0/0:1,0:1:3.01:0,3,36	0/0:2,0:2:6.02:0,6,72	./.	1/1:0,11:11:21.03:203,21,0	1/1:0,10:10:30.05:290,30,0	1/1:1,13:14:27.04:260,27,0	1/1:0,11:11:33.05:319,33,0
chr10	54582526	.	TA	T	4866.43	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=2.329;DP=365;FS=14.826;HRun=10;HaplotypeScore=40.0053;InbreedingCoeff=0.9185;MQ=59.52;MQ0=15;MQRankSum=1.651;QD=20.03;ReadPosRankSum=3.967;VQSLOD=4.1264;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:19:48.52:0,49,505	0/0:7,0:7:21.06:0,21,232	0/0:13,0:6:17.61:0,18,149	0/0:7,0:3:8.61:0,9,76	1/1:2,23:25:62.93:540,63,0	1/1:3,10:11:26.99:234,27,0	0/0:2,0:2:5.42:0,5,26	1/1:10,25:30:58.25:582,58,0	1/1:1,4:4:12:104,12,0	1/1:3,18:21:50.97:438,51,0	1/1:4,15:16:38.95:332,39,0	0/0:4,0:4:12.03:0,12,133	0/0:9,0:9:24.06:0,24,265	1/1:0,8:8:24:208,24,0	1/1:3,6:8:8.99:78,9,0	0/0:9,0:9:21.06:0,21,231	0/0:26,0:23:63.10:0,63,680	0/0:13,0:12:30.08:0,30,330	1/1:5,12:14:32.99:286,33,0	1/1:2,15:17:41.91:356,42,0	1/1:0,4:4:12:104,12,0	0/0:1,0:1:2.99:0,3,24	0/0:7,0:7:21.06:0,21,232	0/0:3,0:3:9.02:0,9,100	1/1:1,20:21:59.99:521,60,0	1/1:1,14:15:35.95:309,36,0	1/1:0,18:17:47.99:416,48,0	1/1:1,15:16:41.93:357,42,0
chr10	54584351	.	A	AT	6774.52	PASS	AB=0.777;AC=31;AF=0.554;AN=56;BaseQRankSum=-9.422;DP=671;FS=5.134;HRun=11;HaplotypeScore=69.6231;InbreedingCoeff=0.7360;MQ=77.41;MQ0=0;MQRankSum=0.473;QD=17.02;ReadPosRankSum=-2.720;VQSLOD=4.8994;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:43,1:47:86.20:0,86,823	0/0:16,0:16:44.78:0,45,344	0/0:19,1:18:1.64:0,2,99	0/1:15,0:16:1.62:2,0,63	1/1:9,23:33:56.79:520,57,0	1/1:5,12:17:6.82:251,7,0	0/1:9,11:20:33.64:238,0,34	1/1:9,19:31:45.37:584,45,0	1/1:2,19:22:41.92:410,42,0	1/1:3,22:25:40.27:555,40,0	1/1:5,19:26:50.73:474,51,0	0/0:16,3:19:11.35:0,11,271	0/0:17,2:20:10.39:0,10,251	1/1:5,20:25:12.80:290,13,0	1/1:4,22:26:7.59:430,8,0	0/0:16,0:16:13.31:0,13,253	0/0:38,1:42:39.42:0,39,611	0/0:17,0:18:34.86:0,35,261	0/1:13,11:24:21.66:335,0,22	1/1:3,15:18:21.82:392,22,0	1/1:3,13:16:33.07:335,33,0	0/0:27,2:29:41.27:0,41,503	0/0:22,0:22:38.80:0,39,302	0/0:23,0:24:40.81:0,41,308	1/1:1,22:24:51.08:506,51,0	1/1:4,23:28:51.74:687,52,0	1/1:6,27:35:33.52:484,34,0	1/1:2,10:12:9.83:281,10,0
chr10	54584655	.	CATGTGCACATAAGTGGTCATCCCTAACAG	C	18798.85	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=4.278;DP=807;FS=5.526;HRun=0;HaplotypeScore=602.4126;InbreedingCoeff=0.9937;MQ=72.81;MQ0=2;MQRankSum=6.292;QD=39.58;ReadPosRankSum=0.803;VQSLOD=0.2897;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,99,1434	0/0:21,0:21:54.18:0,54,875	0/0:15,0:16:10.37:0,10,438	0/0:27,0:25:43.60:0,44,625	1/1:0,25:25:63.02:717,63,0	1/1:22,0:22:63.20:983,63,0	1/1:21,0:21:57.19:875,57,0	1/1:6,25:31:75.23:1230,75,0	1/1:40,0:39:99:1483,99,0	1/1:3,38:40:99:1660,111,0	1/1:2,15:17:32.75:324,33,0	0/0:34,0:34:96.31:0,96,1349	0/0:35,0:35:93.28:0,93,1293	1/1:29,0:29:75.25:1125,75,0	1/1:52,0:52:99:2186,138,0	0/0:49,0:49:99:0,120,1718	0/0:17,0:17:48.05:0,48,704	0/0:10,0:10:30.01:0,30,420	1/1:2,23:25:69.22:1106,69,0	1/1:0,14:14:39.12:472,39,0	1/1:61,0:59:99:2512,163,0	0/0:39,0:39:99:0,114,1873	0/0:26,0:26:69.22:0,69,1058	0/0:18,0:18:48.05:0,48,693	1/1:28,0:28:69.23:1140,69,0	1/1:1,23:24:69.24:1125,69,0	1/1:34,0:34:87.28:1344,87,0	1/1:11,0:11:33.11:517,33,0
chr10	54585371	.	TGCGC	T	881.11	PASS	AB=0.960;AC=24;AF=0.444;AN=54;BaseQRankSum=11.148;DP=693;FS=9.480;HRun=0;HaplotypeScore=146.3858;InbreedingCoeff=0.1575;MQ=31.99;MQ0=90;MQRankSum=-10.625;QD=2.05;ReadPosRankSum=-2.028;VQSLOD=1.5613;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,1:34:55.49:0,55,1745	0/0:12,0:9:17.60:0,18,531	0/0:40,0:1:3.01:0,3,46	0/0:57,0:3:5.88:0,6,149	./.	1/1:30,2:23:14.61:189,15,0	0/1:54,3:37:5.96:114,0,6	0/1:18,0:5:4.61:8,0,5	1/1:13,4:10:6.48:70,6,0	0/1:28,0:20:15.25:87,0,15	0/1:12,0:8:0.13:0,0,0	0/1:29,1:24:7.58:8,0,824	0/1:37,2:28:19.21:19,0,1068	1/1:14,4:9:11.23:81,11,0	0/0:11,1:7:3.01:0,3,84	0/1:19,1:18:64.75:65,0,392	0/1:27,0:24:32.96:33,0,1152	0/1:30,2:25:22.66:23,0,1054	1/1:11,0:6:10.53:55,11,0	0/1:7,1:4:0.11:0,0,0	0/1:21,1:15:0.13:0,0,0	0/0:16,0:12:24.35:0,24,609	0/0:16,0:14:19.82:0,20,612	0/0:45,0:41:22.18:0,22,1462	1/1:11,2:7:2.50:10,2,0	0/1:23,2:17:24.79:171,0,25	1/1:15,1:12:14.21:107,14,0	0/0:2,0:2:2.97:0,3,20
chr10	54585372	.	GCGC	G	745.84	PASS	AB=0.885;AC=17;AF=0.327;AN=52;BaseQRankSum=9.681;DP=604;FS=36.775;HRun=0;HaplotypeScore=123.6399;InbreedingCoeff=-0.0191;MQ=33.37;MQ0=80;MQRankSum=-8.929;QD=2.91;ReadPosRankSum=-2.242;VQSLOD=0.2843;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:32:24.80:0,25,1629	0/1:9,1:8:16.24:16,0,484	0/0:41,0:1:3.01:0,3,67	0/0:59,0:3:5.83:0,6,145	./.	1/1:16,4:17:2.10:184,2,0	1/1:33,5:27:9.32:120,9,0	0/0:12,1:4:8.37:0,8,65	0/1:13,1:8:14.62:64,0,15	0/1:14,3:11:50.59:158,0,51	0/1:8,0:5:0:0,0,0	0/1:26,1:22:37.78:38,0,810	0/0:34,1:27:10.80:0,11,1138	0/1:10,2:9:6.99:37,0,7	0/0:6,1:5:3.01:0,3,74	0/1:18,1:18:76.29:76,0,402	0/1:24,0:24:65.48:65,0,1147	0/0:26,1:24:6.74:0,7,1113	0/0:9,0:4:5.08:0,5,24	0/1:6,0:3:0:0,0,0	./.	0/0:11,1:11:27.08:0,27,607	0/0:16,0:14:27.98:0,28,646	0/0:44,2:43:11.74:0,12,1477	1/1:9,0:5:3.40:18,3,0	0/1:14,0:9:56.55:57,0,84	0/1:9,2:9:13.44:56,0,13	0/0:2,0:2:2.97:0,3,20
chr10	54585470	.	A	ATG	1578.61	PASS	AB=0.890;AC=22;AF=0.440;AN=50;BaseQRankSum=7.382;DP=836;FS=0.000;HRun=0;HaplotypeScore=144.2133;InbreedingCoeff=0.5070;MQ=35.04;MQ0=114;MQRankSum=-8.748;QD=3.84;ReadPosRankSum=-2.399;VQSLOD=2.3976;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:59,0:54:99:0,101,1222	0/0:12,0:10:15.01:0,15,172	./.	0/1:45,0:3:0:0,0,0	1/1:2,1:2:3.01:50,3,0	1/1:8,8:13:11.92:112,12,0	0/1:27,12:26:21.46:197,0,21	0/1:55,1:15:2.10:108,0,2	0/1:16,9:19:16:284,0,16	1/1:19,6:12:18.06:298,18,0	./.	0/0:42,0:32:62.24:0,62,771	0/0:24,0:23:48.06:0,48,550	0/1:22,3:12:0.90:46,0,1	1/1:13,1:10:4.26:41,4,0	0/0:15,0:14:30.08:0,30,364	0/0:39,0:35:79.43:0,79,973	0/0:37,0:36:58.24:0,58,798	0/0:33,0:11:4.47:0,4,45	./.	0/1:109,1:76:13.60:88,0,14	0/0:26,0:23:57.10:0,57,703	0/0:14,0:11:17.79:0,18,202	0/0:84,0:74:99:0,130,1622	1/1:8,4:9:12.04:199,12,0	1/1:26,6:16:12.96:223,13,0	1/1:3,0:4:2.94:26,3,0	1/1:1,1:2:6.02:78,6,0
chr10	54585501	.	TGTG	T	42.77	PASS	AB=0.986;AC=9;AF=0.180;AN=50;BaseQRankSum=5.500;DP=712;FS=10.234;HRun=0;HaplotypeScore=126.7723;InbreedingCoeff=0.1815;MQ=36.13;MQ0=104;MQRankSum=-4.552;QD=0.20;ReadPosRankSum=-2.813;VQSLOD=1.3530;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:52:99:0,108,2387	0/0:10,0:5:11.90:0,12,190	0/0:31,0:5:12.03:0,12,188	0/0:42,0:8:20.39:0,20,258	1/1:3,0:2:2.50:9,2,0	0/1:13,0:11:22.64:23,0,41	0/0:29,0:18:21.58:0,22,297	0/0:43,0:12:18.04:0,18,269	0/1:17,0:12:6.40:6,0,283	0/0:12,0:6:12.37:0,12,162	./.	0/0:31,0:26:46.86:0,47,1171	0/0:30,0:29:74.46:0,74,1424	1/1:21,0:9:2.60:11,3,0	0/0:10,0:4:2.96:0,3,20	0/0:16,0:14:30.10:0,30,593	0/0:41,0:37:97.57:0,98,2043	0/0:32,0:32:79.55:0,80,1593	0/1:30,1:9:34.86:35,0,171	./.	0/1:96,3:63:73.27:73,0,89	0/0:30,0:28:77.47:0,77,1479	0/0:9,0:6:12.03:0,12,204	0/0:69,0:60:99:0,134,2577	0/0:5,0:3:0.21:0,0,0	0/1:24,0:10:0.74:1,0,137	./.	0/0:2,0:2:6.02:0,6,112
chr10	54585528	.	G	GTA	317.66	PASS	AB=0.916;AC=13;AF=0.283;AN=46;BaseQRankSum=6.682;DP=507;FS=22.099;HRun=0;HaplotypeScore=100.8410;InbreedingCoeff=0.1548;MQ=44.25;MQ0=40;MQRankSum=-4.790;QD=2.24;ReadPosRankSum=-0.470;VQSLOD=0.5573;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:42:99:0,101,1413	0/0:5,0:5:11.70:0,12,134	0/0:57,0:4:11.91:0,12,130	0/0:46,0:11:9.52:0,10,204	./.	0/1:6,0:4:31.43:75,0,31	0/1:8,4:11:27:104,0,27	0/1:15,3:8:20.66:84,0,21	1/1:8,0:8:2.86:38,3,0	0/1:4,0:4:5.36:17,0,5	./.	0/0:20,0:20:59.97:0,60,821	0/0:33,0:31:79.36:0,79,1146	0/1:7,0:4:0:0,0,0	1/1:6,0:3:2.97:20,3,0	0/0:15,0:14:26.67:0,27,371	0/0:32,0:31:84.13:0,84,1254	0/0:24,0:24:69.14:0,69,1017	0/1:15,1:4:37.38:38,0,37	./.	1/1:47,3:40:1.26:36,1,0	0/0:22,0:22:63.05:0,63,937	0/0:8,0:7:18.02:0,18,220	0/0:50,0:52:99:0,114,1655	./.	0/1:6,1:5:37.75:38,0,38	./.	0/0:1,0:1:2.99:0,3,24
chr10	54585562	.	GGTA	G	38.32	PASS	AB=0.968;AC=10;AF=0.192;AN=52;BaseQRankSum=5.652;DP=611;FS=8.778;HRun=0;HaplotypeScore=110.5874;InbreedingCoeff=0.0793;MQ=45.39;MQ0=51;MQRankSum=-3.488;QD=0.27;ReadPosRankSum=-3.537;VQSLOD=0.6221;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:38:57.31:0,57,1984	0/0:8,0:6:18.06:0,18,421	0/0:94,1:6:11.83:0,12,218	0/1:81,4:14:36.50:36,0,222	./.	0/1:5,0:5:19.19:19,0,105	0/1:11,0:9:13.64:14,0,151	0/0:17,0:11:24.03:0,24,332	0/0:5,1:6:11.71:0,12,166	0/0:15,0:10:30.06:0,30,508	1/1:4,0:4:2.90:16,3,0	0/0:23,1:23:36.59:0,37,1223	0/0:36,0:36:99:0,108,2416	0/0:8,0:6:5.18:0,5,66	0/0:8,1:7:5.95:0,6,84	0/1:18,1:19:13.28:13,0,790	0/0:27,0:26:69.13:0,69,1520	0/0:20,0:17:44.98:0,45,1009	0/0:25,0:10:15.04:0,15,286	./.	0/0:45,3:37:14.79:0,15,300	0/0:20,0:19:54.10:0,54,1174	0/0:19,0:19:51.17:0,51,1149	0/0:43,2:45:89.48:0,89,2174	1/1:4,0:2:2.69:18,3,0	0/1:8,1:6:44.65:45,0,126	0/1:2,0:2:9.98:10,0,56	0/0:1,0:1:3.01:0,3,55
chr10	54585588	.	T	TTG	1379.35	PASS	AB=0.954;AC=14;AF=0.280;AN=50;BaseQRankSum=-0.558;DP=1022;FS=4.127;HRun=0;HaplotypeScore=160.6129;InbreedingCoeff=0.1399;MQ=31.99;MQ0=165;MQRankSum=0.515;QD=3.94;ReadPosRankSum=-0.867;VQSLOD=2.9076;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:54,7:48:15.11:438,0,15	0/0:17,0:12:0.37:0,0,47	./.	0/0:44,0:7:8.96:0,9,76	./.	0/0:20,0:14:5.66:0,6,47	0/0:39,1:18:0.28:0,0,49	0/0:46,0:16:17.63:0,18,165	0/1:26,0:19:12.44:12,0,33	0/0:41,0:18:6.87:0,7,44	1/1:16,0:12:3.09:8,3,0	0/0:48,0:35:41.65:0,42,420	0/0:38,0:31:36:0,36,404	0/0:22,0:11:1.15:0,1,11	1/1:21,0:14:2.94:21,3,0	1/1:23,6:26:0.53:387,1,0	1/1:37,5:34:7.31:476,7,0	0/1:30,2:22:28.82:148,0,29	0/1:57,0:12:11.40:11,0,25	0/1:17,0:9:0:0,0,0	0/0:120,0:77:5.18:0,5,20	0/0:32,0:22:26.29:0,26,250	0/0:28,0:24:23.84:0,24,246	0/0:58,0:54:74.42:0,74,798	./.	0/1:39,0:17:9.10:9,0,93	0/0:8,0:6:5.59:0,6,26	0/0:8,0:3:1.16:0,1,32
chr10	54585596	.	G	GA	264.10	PASS	AB=0.956;AC=13;AF=0.232;AN=56;BaseQRankSum=3.080;DP=1244;FS=0.742;HRun=0;HaplotypeScore=183.4780;InbreedingCoeff=-0.1518;MQ=27.27;MQ0=234;MQRankSum=-4.641;QD=0.45;ReadPosRankSum=-0.471;VQSLOD=2.4853;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:70,0:52:77.88:0,78,836	0/1:15,2:13:76.69:77,0,205	0/0:28,0:1:3.01:0,3,42	0/0:34,0:4:12.04:0,12,167	1/1:21,0:6:2.80:13,3,0	0/0:32,0:20:21.20:0,21,212	0/1:67,0:29:2.37:2,0,281	0/0:50,1:13:24.33:0,24,247	0/1:42,0:28:16.08:16,0,82	0/0:47,0:19:46:0,46,548	0/1:20,1:15:29.25:29,0,122	0/1:57,2:40:23.69:24,0,818	0/0:47,0:32:66.03:0,66,820	0/1:37,1:17:14.20:55,0,14	0/1:31,1:14:54.86:61,0,55	0/0:38,0:29:17.88:0,18,328	0/0:54,0:38:36.25:0,36,561	0/0:42,0:25:45.90:0,46,474	0/0:48,0:7:13.72:0,14,126	0/0:23,1:13:0.02:0,0,1	0/1:166,4:99:59.04:59,0,135	0/1:37,1:22:9.63:10,0,420	0/0:28,0:22:43.39:0,43,587	0/0:78,1:59:87.35:0,87,1135	0/0:21,1:7:2.88:0,3,33	0/1:55,1:23:22.96:23,0,395	0/1:10,1:6:38.88:39,0,66	0/0:11,0:4:8.06:0,8,90
chr10	54585748	.	GTA	G	205.62	PASS	AB=0.957;AC=16;AF=0.333;AN=48;BaseQRankSum=7.129;DP=581;DS;FS=29.316;HRun=0;HaplotypeScore=103.2208;InbreedingCoeff=0.3508;MQ=34.68;MQ0=149;MQRankSum=-5.767;QD=1.19;ReadPosRankSum=-4.012;VQSLOD=-0.7377;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:30:54.57:0,55,900	0/1:13,1:8:31.43:31,0,159	./.	./.	0/0:2,0:1:2.99:0,3,24	0/1:7,0:3:0:0,0,0	1/1:28,2:12:0.33:25,0,0	0/0:15,0:5:8.88:0,9,57	0/1:9,0:6:7.97:8,0,66	0/0:7,0:6:8.56:0,9,74	1/1:2,0:1:2.84:14,3,0	0/0:37,0:29:47.87:0,48,844	0/0:30,1:26:60.16:0,60,1023	1/1:5,0:3:2.87:28,3,0	0/0:10,0:4:0.10:0,0,1	0/1:15,2:14:78.57:79,0,318	0/0:36,0:28:72.15:0,72,1286	0/0:37,0:30:50:0,50,1331	1/1:3,0:2:5.93:49,6,0	0/0:2,0:2:2.99:0,3,24	1/1:66,6:53:1.96:82,2,0	0/0:23,0:19:51.15:0,51,911	0/0:10,0:7:15.02:0,15,220	0/0:61,1:50:81.73:0,82,1773	0/0:2,0:2:3:0,3,25	1/1:10,0:3:3:25,3,0	./.	./.
chr10	54585750	.	A	ATG	47.47	PASS	AB=0.936;AC=9;AF=0.214;AN=42;BaseQRankSum=5.812;DP=597;DS;FS=11.578;HRun=0;HaplotypeScore=113.3570;InbreedingCoeff=0.4349;MQ=34.35;MQ0=146;MQRankSum=-5.680;QD=0.33;ReadPosRankSum=-3.648;VQSLOD=0.3781;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:31:40.54:0,41,511	0/0:12,0:7:11.76:0,12,125	./.	./.	./.	0/1:5,0:2:0:0,0,0	1/1:34,0:14:9.30:38,9,0	0/0:20,0:6:9.02:0,9,99	0/1:7,1:5:28.92:57,0,29	1/1:7,0:6:2.80:7,3,0	./.	0/0:37,0:30:45.13:0,45,553	0/0:30,0:25:51.04:0,51,630	0/0:6,0:3:1.47:0,1,4	1/1:10,0:4:2.54:10,3,0	0/0:17,0:14:7.28:0,7,233	0/0:38,0:30:62.79:0,63,793	0/0:36,0:30:70.45:0,70,852	0/0:5,0:3:0.82:0,1,9	./.	0/1:72,7:55:5.38:47,0,5	0/0:24,0:19:45.14:0,45,561	0/0:11,0:8:15.03:0,15,175	0/0:65,0:52:74.35:0,74,1048	0/0:4,0:3:0:0,0,0	0/0:10,0:2:2.74:0,3,12	./.	./.
chr10	54585762	.	GGTAT	G	100.26	PASS	AB=0.909;AC=10;AF=0.263;AN=38;BaseQRankSum=7.137;DP=645;FS=26.632;HRun=0;HaplotypeScore=144.6441;InbreedingCoeff=0.0677;MQ=33.41;MQ0=138;MQRankSum=-6.220;QD=0.44;ReadPosRankSum=-3.634;VQSLOD=0.0994;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:28:49.41:0,49,1267	0/1:13,0:8:25.13:25,0,163	./.	./.	./.	./.	0/1:24,3:17:42.75:69,0,43	0/1:55,1:33:35.33:35,0,923	0/1:8,0:7:8.04:8,0,74	0/0:11,0:6:14.97:0,15,259	./.	0/0:38,0:30:53.11:0,53,1139	0/0:29,0:25:40.53:0,41,1126	1/1:7,0:3:2.71:13,3,0	1/1:2,2:2:3.84:21,4,0	0/0:19,0:16:16.71:0,17,666	0/0:44,1:34:44.05:0,44,1829	0/0:33,1:29:47.23:0,47,1588	0/0:12,0:4:3.06:0,3,40	./.	0/1:74,10:62:1.71:2,0,126	0/0:28,0:22:53.82:0,54,1135	0/0:14,0:9:23.73:0,24,451	0/0:63,1:52:88.03:0,88,1907	./.	0/1:12,1:3:46.32:46,0,48	./.	./.
chr10	54585763	.	GTA	G	85.72	PASS	AB=0.921;AC=12;AF=0.286;AN=42;BaseQRankSum=7.295;DP=637;FS=18.872;HRun=0;HaplotypeScore=131.9430;InbreedingCoeff=0.0755;MQ=33.24;MQ0=136;MQRankSum=-6.441;QD=0.35;ReadPosRankSum=-2.928;VQSLOD=0.6547;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:27:48.62:0,49,876	0/1:12,1:8:31.66:32,0,122	./.	./.	./.	0/1:2,1:3:0:0,0,0	0/1:30,2:17:14.17:54,0,14	0/1:54,5:33:32.76:33,0,658	0/1:9,1:7:3.39:3,0,55	0/0:11,0:6:7.37:0,7,153	./.	0/0:39,0:31:56.23:0,56,862	0/0:28,1:25:37.57:0,38,806	1/1:8,0:3:3:26,3,0	1/1:6,0:2:3.35:16,3,0	0/0:20,0:17:19.33:0,19,483	0/0:42,2:33:52.95:0,53,1272	0/0:34,1:28:47.14:0,47,1080	0/1:13,0:4:22.43:22,0,31	./.	0/1:81,6:62:7.07:7,0,93	0/0:27,0:21:50.61:0,51,809	0/0:13,1:9:23.73:0,24,341	0/0:58,2:48:42.76:0,43,1309	0/0:2,1:2:0:0,0,0	0/1:14,0:3:15.28:15,0,33	./.	./.
chr10	54585779	.	GGTA	G	93.57	PASS	AB=0.954;AC=10;AF=0.217;AN=46;BaseQRankSum=6.339;DP=694;FS=16.262;HRun=0;HaplotypeScore=129.3246;InbreedingCoeff=-0.0245;MQ=32.01;MQ0=112;MQRankSum=-6.134;QD=0.48;ReadPosRankSum=-2.178;VQSLOD=1.3035;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:29:45.07:0,45,896	0/0:15,0:9:15.87:0,16,177	0/0:10,1:1:2.99:0,3,23	./.	./.	1/1:3,2:4:1.55:4,2,0	0/1:31,4:18:25.19:82,0,25	0/1:66,2:38:12.35:12,0,1060	0/1:13,1:8:32.04:32,0,62	0/0:18,0:9:5.45:0,5,387	./.	0/0:39,1:31:59.83:0,60,1206	0/1:26,1:23:0.54:1,0,978	0/0:12,1:5:3.46:0,3,20	0/0:9,0:6:0.06:0,0,15	0/1:17,1:15:21.33:21,0,640	0/0:46,0:37:53.40:0,53,1874	0/0:37,0:28:65.22:0,65,1178	0/0:23,0:5:6.65:0,7,64	1/1:8,1:8:0.10:47,0,0	0/0:92,5:64:11.17:0,11,215	0/0:30,0:26:64.25:0,64,1350	0/0:18,0:12:17.93:0,18,375	0/0:56,1:47:55.88:0,56,1490	0/0:7,0:4:2.84:0,3,16	0/1:16,0:3:6.76:7,0,82	./.	./.
chr10	54585780	.	GTA	G	100.17	PASS	AB=0.963;AC=13;AF=0.283;AN=46;BaseQRankSum=6.376;DP=695;FS=19.146;HRun=0;HaplotypeScore=124.4688;InbreedingCoeff=0.2180;MQ=32.11;MQ0=110;MQRankSum=-4.897;QD=0.38;ReadPosRankSum=-2.255;VQSLOD=1.0171;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:28:35.58:0,36,560	0/0:16,0:10:15.09:0,15,172	0/0:13,0:1:3.01:0,3,46	./.	./.	0/1:5,0:4:0.08:0,0,0	1/1:37,1:18:9.69:97,10,0	0/0:65,2:38:10.91:0,11,699	0/1:13,2:8:6.13:6,0,19	0/0:16,1:9:24:0,24,298	./.	0/0:38,2:31:26.78:0,27,761	0/0:26,0:23:36.17:0,36,620	1/1:12,1:5:6.99:33,7,0	0/1:9,0:6:14.19:14,0,56	0/0:18,0:15:15.84:0,16,422	0/0:46,0:37:59.46:0,59,1385	0/1:37,0:28:10.74:11,0,620	0/1:23,0:5:4.20:4,0,52	1/1:9,0:8:2.97:21,3,0	0/1:94,5:64:27.96:28,0,136	0/0:29,1:26:44.97:0,45,1014	0/0:18,0:12:15.04:0,15,254	0/0:57,0:47:22.84:0,23,908	0/0:7,0:4:2.59:0,3,14	0/1:17,0:3:21.81:22,0,32	./.	./.
chr10	54585795	.	T	TA	110.69	PASS	AB=0.931;AC=4;AF=0.080;AN=50;BaseQRankSum=2.598;DP=782;FS=3.010;HRun=0;HaplotypeScore=121.7281;InbreedingCoeff=0.1671;MQ=31.40;MQ0=115;MQRankSum=-4.198;QD=1.26;ReadPosRankSum=-1.469;VQSLOD=2.1993;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:26:38.91:0,39,510	0/0:10,0:8:18.04:0,18,244	0/0:52,0:1:3.01:0,3,42	./.	0/0:8,0:4:3.01:0,3,41	0/0:10,0:7:6.49:0,6,53	0/0:37,0:16:6.92:0,7,48	0/1:56,6:37:99:174,0,449	0/1:18,0:11:22.15:22,0,72	0/0:18,0:10:5.92:0,6,173	1/1:7,0:4:0.89:2,1,0	0/0:36,0:31:60.16:0,60,799	0/0:21,0:19:42.01:0,42,557	0/0:15,0:5:0.47:0,0,1	0/0:13,0:7:8.48:0,8,58	0/0:20,0:18:32.90:0,33,430	0/0:49,0:42:99:0,103,1357	0/0:35,0:27:43.37:0,43,739	0/0:22,0:4:8.94:0,9,99	0/0:14,0:12:3.92:0,4,23	0/0:97,0:60:23.34:0,23,211	0/0:29,0:28:67.11:0,67,923	0/0:20,0:13:24.08:0,24,333	0/0:70,0:58:97.55:0,98,1239	0/0:8,0:5:1.25:0,1,3	0/0:20,0:6:14.96:0,15,183	./.	./.
chr10	54585811	.	GGTGTC	G	94.52	PASS	AB=0.963;AC=11;AF=0.229;AN=48;BaseQRankSum=6.161;DP=616;FS=10.286;HRun=0;HaplotypeScore=103.5763;InbreedingCoeff=0.1762;MQ=32.11;MQ0=110;MQRankSum=-5.568;QD=0.57;ReadPosRankSum=-1.524;VQSLOD=0.5116;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,1:22:51.06:0,51,1479	0/0:8,0:6:1.37:0,1,385	0/0:68,0:1:2.99:0,3,23	./.	0/0:9,0:3:3.01:0,3,98	0/1:7,1:5:7.40:7,0,46	./.	0/0:15,0:6:3.01:0,3,56	0/1:10,1:7:56.81:57,0,99	0/0:12,0:6:8.96:0,9,118	0/1:5,0:2:0:0,0,0	0/0:26,0:24:53.72:0,54,1506	0/0:20,0:16:33.11:0,33,984	1/1:8,0:2:2.04:6,2,0	0/0:7,0:3:7.79:0,8,89	0/0:21,0:18:28.69:0,29,944	0/0:39,1:37:30.41:0,30,2744	0/1:24,0:21:24.35:24,0,1549	1/1:10,1:1:3.01:70,3,0	0/0:12,0:9:2.70:0,3,20	1/1:62,4:48:4.02:18,4,0	0/0:26,0:25:62.58:0,63,1839	0/0:19,0:13:21.07:0,21,646	0/0:53,2:46:89.49:0,89,2673	./.	0/1:17,0:6:33:33,0,150	./.	0/0:2,0:2:6.02:0,6,136
chr10	54585873	.	GTA	G	927.52	PASS	AB=0.981;AC=19;AF=0.380;AN=50;BaseQRankSum=6.274;DP=663;FS=7.306;HRun=0;HaplotypeScore=118.8525;InbreedingCoeff=-0.1067;MQ=31.98;MQ0=85;MQRankSum=-2.917;QD=2.56;ReadPosRankSum=3.766;VQSLOD=1.5495;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:47,1:32:44.25:144,0,44	0/1:7,0:3:38.36:38,0,46	0/0:27,0:2:6:0,6,58	./.	./.	1/1:7,0:5:6.54:54,7,0	0/1:27,0:12:3.25:3,0,80	0/1:47,2:23:80.32:80,0,222	0/1:19,2:17:32.96:33,0,97	0/0:21,2:9:15.03:0,15,227	0/0:11,0:6:1.32:0,1,14	0/0:35,0:28:33.17:0,33,650	0/0:34,0:27:69.20:0,69,1188	0/0:11,0:6:7.85:0,8,62	0/1:6,0:4:18.73:19,0,35	0/1:21,1:15:58.95:59,0,91	0/1:42,1:37:99:265,0,126	0/1:36,0:31:99:272,0,120	1/1:22,0:4:2.80:13,3,0	./.	0/1:36,0:24:25.74:26,0,27	0/1:33,0:28:18.65:19,0,708	0/0:25,0:17:29.78:0,30,506	0/0:53,0:46:73.87:0,74,1452	0/0:7,0:6:4.26:0,4,54	0/0:20,0:8:6.06:0,6,91	1/1:2,1:2:5.75:41,6,0	1/1:2,0:1:2.68:11,3,0
chr10	54585875	.	ATG	A	1642.07	PASS	AB=0.873;AC=14;AF=0.280;AN=50;BaseQRankSum=-0.167;DP=697;FS=0.000;HRun=0;HaplotypeScore=122.9225;InbreedingCoeff=-0.1656;MQ=31.61;MQ0=95;MQRankSum=0.618;QD=5.62;ReadPosRankSum=5.101;VQSLOD=2.4421;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:30,20:34:10.77:377,0,11	0/1:6,1:3:32.18:55,0,32	0/0:29,0:2:5.98:0,6,60	./.	./.	1/1:6,0:5:5.68:28,6,0	0/0:26,0:13:13.74:0,14,131	0/0:55,0:24:16.11:0,16,149	0/0:20,0:17:1.78:0,2,70	0/0:24,0:11:14.83:0,15,171	0/0:8,0:6:3.89:0,4,36	0/0:39,0:31:34.03:0,34,657	0/0:35,0:28:71.71:0,72,1085	0/1:11,0:6:1.63:2,0,37	0/1:6,0:4:4.40:4,0,39	0/1:15,9:17:32.25:164,0,32	0/1:26,17:37:73.34:551,0,73	0/1:23,14:32:99:480,0,146	0/0:24,0:5:1.84:0,2,6	./.	0/1:29,7:26:28.33:28,0,40	0/1:30,3:28:63.23:63,0,612	0/0:24,0:17:29.93:0,30,475	0/0:53,1:46:44.16:0,44,1183	0/1:8,0:7:8.13:8,0,42	0/1:24,0:8:7.33:7,0,35	0/1:3,0:2:1.75:9,0,2	0/0:2,0:1:2.37:0,2,8
chr10	54585896	.	ATGTGG	A	124.23	PASS	AB=0.996;AC=9;AF=0.173;AN=52;BaseQRankSum=7.462;DP=925;FS=11.255;HRun=0;HaplotypeScore=171.5547;InbreedingCoeff=-0.0537;MQ=31.09;MQ0=110;MQRankSum=-4.726;QD=0.64;ReadPosRankSum=-0.054;VQSLOD=1.9071;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:60,1:50:26.51:0,27,1465	0/0:9,0:6:15.05:0,15,379	0/0:48,0:2:3.01:0,3,59	./.	0/0:11,0:4:2.12:0,2,36	0/1:9,0:7:40.33:40,0,63	0/0:42,0:17:12.98:0,13,201	0/0:80,0:33:47.85:0,48,962	0/1:23,0:16:5.71:6,0,375	0/0:38,0:14:26.94:0,27,458	./.	0/0:53,0:44:84.67:0,85,2146	0/0:37,0:33:84.29:0,84,2433	0/1:15,0:8:39.44:39,0,68	1/1:9,0:5:2.80:13,3,0	0/1:25,0:17:60.72:61,0,520	0/0:52,0:41:30.62:0,31,1854	0/0:45,0:37:8.33:0,8,2019	0/0:33,0:7:3.96:0,4,70	0/0:13,0:5:0:0,0,0	0/1:72,2:37:44.75:45,0,228	0/0:38,0:35:56.44:0,56,1644	0/0:24,0:20:36.22:0,36,956	0/0:54,0:49:88.21:0,88,2258	0/0:13,0:7:0.35:0,0,85	0/1:30,0:11:30.95:31,0,219	0/1:8,0:4:15.90:16,0,55	0/0:7,0:5:11.96:0,12,138
chr10	54585922	.	G	GGT	2455.53	PASS	AB=0.909;AC=18;AF=0.375;AN=48;BaseQRankSum=0.348;DP=1018;FS=2.472;HRun=0;HaplotypeScore=159.4759;InbreedingCoeff=0.2344;MQ=30.09;MQ0=173;MQRankSum=-2.017;QD=4.67;ReadPosRankSum=0.074;VQSLOD=3.2812;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:57,16:52:68.75:567,0,69	1/1:8,6:10:13.86:197,14,0	./.	./.	0/0:12,0:3:2.97:0,3,20	0/0:14,0:10:15.62:0,16,91	0/0:45,1:21:13.28:0,13,145	0/1:117,0:47:14.85:15,0,298	1/1:23,0:15:5.37:54,5,0	0/1:40,0:15:18.22:26,0,18	./.	0/0:58,0:48:66.03:0,66,781	0/0:41,0:35:52.36:0,52,611	0/0:20,0:8:2.97:0,3,20	./.	0/1:24,7:22:60.11:437,0,60	1/1:29,13:34:6.35:612,6,0	1/1:28,12:32:41.58:587,42,0	0/0:40,0:3:2.28:0,2,44	0/0:17,0:8:5.04:0,5,42	1/1:81,0:38:0.44:3,0,0	0/0:35,0:29:39.11:0,39,462	0/0:25,0:19:19.30:0,19,218	0/0:51,0:45:69.71:0,70,861	0/1:17,0:10:9.65:31,0,10	1/1:31,0:8:3.01:47,3,0	0/0:10,0:6:4.09:0,4,17	0/1:5,0:4:29.96:34,0,30
chr10	54585934	.	T	TA	258.66	PASS	AB=0.884;AC=9;AF=0.173;AN=52;BaseQRankSum=5.117;DP=903;FS=9.882;HRun=0;HaplotypeScore=143.1509;InbreedingCoeff=-0.0539;MQ=33.15;MQ0=165;MQRankSum=-4.599;QD=1.39;ReadPosRankSum=-0.491;VQSLOD=1.8108;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:71,0:50:81.31:0,81,859	0/0:16,0:12:20.42:0,20,177	./.	./.	0/0:10,0:2:3.01:0,3,42	0/1:10,4:10:66.13:173,0,66	0/0:43,0:19:15.01:0,15,185	0/0:106,0:47:62.31:0,62,780	0/1:16,2:12:2.53:3,0,65	0/1:32,1:14:21.36:21,0,287	0/0:10,0:8:2.88:0,3,15	0/0:53,0:46:90.30:0,90,1249	0/0:39,0:33:81.23:0,81,1085	0/0:16,0:8:3.01:0,3,41	1/1:12,1:2:2.88:15,3,0	0/0:31,0:23:53.61:0,54,534	0/0:41,0:34:61.94:0,62,684	0/0:33,0:25:62.70:0,63,516	0/0:34,0:4:7.60:0,8,57	0/1:11,2:7:35.87:42,0,36	0/1:70,0:38:10.76:11,0,57	0/0:35,0:31:52.40:0,52,712	0/0:25,0:22:42.04:0,42,532	0/0:57,0:48:99:0,107,1427	0/1:11,2:9:27.38:84,0,27	0/0:20,0:5:11.89:0,12,103	0/1:8,1:5:15.85:37,0,16	0/0:6,0:4:6:0,6,66
chr10	54585941	.	GGTA	G	74.98	PASS	AB=0.966;AC=10;AF=0.185;AN=54;BaseQRankSum=7.025;DP=792;FS=1.768;HRun=0;HaplotypeScore=138.3919;InbreedingCoeff=0.0829;MQ=35.13;MQ0=151;MQRankSum=-6.619;QD=0.37;ReadPosRankSum=-3.524;VQSLOD=1.8364;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:64,1:46:61:0,61,1349	0/0:16,0:12:18.06:0,18,305	./.	0/0:31,0:3:0.82:0,1,2	0/0:7,0:2:2.97:0,3,20	0/0:10,0:7:7.53:0,8,150	0/0:29,5:15:12.04:0,12,293	0/0:95,1:41:30.60:0,31,722	0/1:13,1:9:20.37:20,0,31	0/1:28,1:10:33.03:33,0,187	0/0:8,0:6:0.46:0,0,1	0/0:45,1:41:85.48:0,85,1864	0/0:31,0:26:66.04:0,66,1434	0/0:10,1:4:1.67:0,2,17	1/1:9,1:1:3.01:48,3,0	0/0:27,0:22:43.30:0,43,921	0/0:38,0:34:15.20:0,15,1096	0/1:25,2:21:49.19:49,0,753	0/1:36,0:4:9.07:9,0,59	0/0:9,0:6:3.68:0,4,98	0/1:55,2:34:29.69:30,0,56	0/0:31,0:28:52.26:0,52,1074	0/0:23,0:19:42.52:0,43,882	0/0:58,0:51:99:0,122,2524	0/0:12,0:8:7.92:0,8,68	1/1:16,1:3:0.87:6,1,0	0/1:7,0:3:3.09:3,0,27	0/0:5,0:3:5.85:0,6,82
chr10	54585953	.	G	GT	307.62	PASS	AB=0.866;AC=7;AF=0.135;AN=52;BaseQRankSum=6.317;DP=778;FS=0.000;HRun=1;HaplotypeScore=134.1272;InbreedingCoeff=-0.0167;MQ=39.13;MQ0=112;MQRankSum=-6.236;QD=3.08;ReadPosRankSum=0.264;VQSLOD=-0.2703;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:74,0:58:97.38:0,97,1277	0/0:16,0:12:27.09:0,27,348	0/0:36,0:2:6.02:0,6,70	0/0:47,0:4:3.92:0,4,15	./.	0/1:4,4:7:0.98:161,0,1	0/1:32,0:14:28.90:29,0,50	0/0:75,0:32:13.01:0,13,323	0/1:12,2:10:38.92:39,0,39	0/1:19,0:8:31.66:32,0,33	0/0:9,0:4:2.68:0,3,11	0/0:49,0:44:87.28:0,87,1125	0/0:30,0:25:54.17:0,54,693	./.	0/0:7,1:1:3.01:0,3,39	0/0:32,0:26:59.49:0,59,753	0/0:40,0:37:36.89:0,37,910	0/0:31,0:25:63.33:0,63,769	0/0:22,0:2:3.01:0,3,39	0/1:8,2:7:35.38:37,0,35	0/0:53,0:33:8.26:0,8,87	0/0:35,0:32:57.18:0,57,734	0/0:23,0:20:45.06:0,45,551	0/0:58,0:49:99:0,114,1457	0/1:10,2:6:2.18:81,0,2	0/0:13,0:4:5.68:0,6,39	0/1:4,1:3:29.04:53,0,29	0/0:6,0:3:2.68:0,3,11
chr10	54585965	.	GGTA	G	177.14	PASS	AB=0.955;AC=12;AF=0.222;AN=54;BaseQRankSum=6.096;DP=607;FS=0.000;HRun=0;HaplotypeScore=115.3925;InbreedingCoeff=0.1199;MQ=43.10;MQ0=96;MQRankSum=-5.841;QD=1.44;ReadPosRankSum=-2.187;VQSLOD=1.3676;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:62,0:53:99:0,123,2537	0/0:15,0:12:27.05:0,27,527	0/0:41,0:2:6.02:0,6,124	0/0:51,1:4:4.85:0,5,55	./.	0/1:6,0:6:19.97:36,0,20	0/1:15,0:8:22.69:70,0,23	0/0:30,1:12:16.40:0,16,203	0/1:10,1:8:5.93:62,0,6	0/0:9,0:4:8.99:0,9,111	1/1:4,2:2:3.01:49,3,0	0/0:46,0:42:97.19:0,97,2063	0/0:19,0:15:36.12:0,36,780	0/1:4,0:3:0:0,0,0	0/0:3,0:1:2.74:0,3,12	0/0:29,0:25:60.12:0,60,1336	0/0:38,1:37:87.21:0,87,2158	0/1:28,2:23:39.65:40,0,1318	0/0:17,1:2:3.01:0,3,44	0/1:5,0:4:2.56:3,0,43	0/1:31,1:20:36.14:36,0,140	0/0:25,0:24:45.05:0,45,1031	0/0:22,0:20:41.67:0,42,1011	0/0:55,0:50:99:0,120,2710	0/0:10,0:6:4.81:0,5,48	0/1:7,2:4:0.85:1,0,3	0/0:4,0:3:6.02:0,6,124	1/1:4,0:1:2.37:8,2,0
chr10	54586019	.	GAT	G	99.90	PASS	AB=0.743;AC=15;AF=0.341;AN=44;BaseQRankSum=6.762;DP=521;FS=3.560;HRun=0;HaplotypeScore=105.5649;InbreedingCoeff=0.3993;MQ=39.96;MQ0=118;MQRankSum=-6.716;QD=1.64;ReadPosRankSum=-1.582;VQSLOD=1.7670;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:53:99:0,117,2140	0/0:5,0:4:5.97:0,6,75	0/0:57,0:2:6.02:0,6,105	0/0:61,0:2:3.01:0,3,51	./.	1/1:0,1:1:3.01:39,3,0	0/1:4,2:3:21.88:48,0,22	0/0:24,2:11:11.97:0,12,101	./.	0/1:7,3:7:19.57:20,0,90	./.	0/0:35,1:36:89.57:0,90,1589	0/0:20,0:21:28.36:0,28,1010	1/1:2,1:2:3.01:34,3,0	./.	0/0:18,0:18:51.17:0,51,977	0/0:34,1:35:69.23:0,69,1350	0/0:22,1:22:53.75:0,54,1197	1/1:4,1:1:2.74:12,3,0	1/1:0,1:1:2.37:8,2,0	0/1:13,5:14:16.68:38,0,17	0/0:24,0:24:63.01:0,63,1214	0/0:16,0:16:39.98:0,40,686	0/0:64,0:62:99:0,152,2725	./.	1/1:4,5:3:5.59:27,6,0	1/1:1,2:3:2.74:12,3,0	./.
chr10	54586032	.	GGTA	G	39.06	PASS	AB=0.934;AC=10;AF=0.217;AN=46;BaseQRankSum=4.144;DP=693;FS=10.793;HRun=0;HaplotypeScore=132.5794;InbreedingCoeff=0.1790;MQ=37.90;MQ0=120;MQRankSum=-4.105;QD=0.22;ReadPosRankSum=-2.838;VQSLOD=0.7139;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:59,0:57:53.38:0,53,1792	0/0:8,0:6:5.64:0,6,53	0/0:60,0:2:6.02:0,6,112	0/0:68,3:3:6.49:0,6,78	./.	0/1:4,0:3:0:0,0,0	0/1:15,1:10:23.36:23,0,70	0/1:44,0:18:6.39:6,0,341	1/1:11,0:7:7.30:35,7,0	0/1:15,1:12:29.57:30,0,228	./.	0/0:49,1:47:84.27:0,84,1871	0/0:31,0:28:42.38:0,42,1493	1/1:6,0:3:5.82:35,6,0	./.	0/0:22,0:20:28.13:0,28,732	0/0:38,0:36:58.70:0,59,1245	0/0:30,0:31:37.37:0,37,1170	0/0:14,0:6:6.05:0,6,134	0/0:7,1:4:3.90:0,4,60	0/1:51,4:35:14.41:20,0,14	0/0:26,0:24:35.83:0,36,1274	0/0:16,0:15:34:0,34,745	0/0:62,1:60:99:0,147,3196	./.	0/1:14,2:10:17.89:18,0,173	0/0:3,1:4:5.89:0,6,107	./.
chr10	54586035	.	A	ATG	3045.09	PASS	AB=0.872;AC=11;AF=0.250;AN=44;BaseQRankSum=-4.751;DP=725;FS=5.589;HRun=0;HaplotypeScore=125.8038;InbreedingCoeff=0.2361;MQ=37.24;MQ0=123;MQRankSum=0.188;QD=14.30;ReadPosRankSum=0.154;VQSLOD=3.4344;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:41,21:57:21.52:1070,22,0	0/0:7,1:6:6.02:0,6,71	0/0:57,0:2:5.91:0,6,53	0/0:70,0:3:6.21:0,6,30	./.	./.	0/0:16,0:10:1.54:0,2,30	0/0:46,0:20:8.98:0,9,122	1/1:11,0:7:1.57:8,2,0	0/1:17,0:14:26.31:26,0,83	./.	0/0:52,0:48:41.43:0,41,759	0/0:36,0:32:58.33:0,58,648	0/1:4,0:3:8.09:25,0,8	./.	1/1:12,8:18:27.07:400,27,0	0/1:20,20:38:90.46:835,0,90	0/1:19,15:32:39.70:794,0,40	0/0:16,0:6:9.54:0,10,110	0/0:8,0:4:1.41:0,1,34	0/0:68,0:40:6.33:0,6,51	0/0:27,0:24:36.02:0,36,418	0/0:18,0:15:15.52:0,16,184	0/0:62,1:59:99:0,114,1341	./.	0/1:20,0:11:3.23:24,0,3	0/0:4,0:3:5.88:0,6,73	./.
chr10	54586051	.	GGTA	G	80.02	PASS	AB=0.963;AC=10;AF=0.192;AN=52;BaseQRankSum=2.993;DP=841;FS=1.919;HRun=0;HaplotypeScore=150.8041;InbreedingCoeff=0.0469;MQ=35.06;MQ0=100;MQRankSum=-2.627;QD=0.31;ReadPosRankSum=-2.161;VQSLOD=2.4488;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:61,2:56:29.93:0,30,1476	0/0:9,0:6:11.63:0,12,181	0/0:45,0:3:6.02:0,6,135	0/0:57,0:5:14.08:0,14,269	./.	0/0:6,0:4:4.85:0,5,24	0/1:28,0:18:21.67:22,0,171	0/0:62,0:31:49.86:0,50,876	0/1:15,0:8:19:25,0,19	0/0:29,0:18:18.07:0,18,333	0/1:5,1:3:0:0,0,0	0/0:49,0:44:99:0,105,1911	0/0:41,0:34:83.23:0,83,1678	1/1:11,1:5:2.38:57,2,0	0/1:8,0:3:0:0,0,0	0/1:22,0:19:37.13:37,0,389	0/0:39,3:41:55.33:0,55,1426	0/1:32,1:30:15.63:16,0,1112	0/1:27,1:12:31.43:31,0,339	0/0:13,0:8:6.49:0,6,125	0/1:94,3:50:16.50:16,0,85	0/0:26,1:23:51.66:0,52,1033	0/0:16,0:12:18.24:0,18,385	0/0:68,3:63:99:0,144,3186	0/0:6,1:3:2.90:0,3,16	0/0:25,0:15:16.24:0,16,294	0/0:6,0:4:9.03:0,9,177	./.
chr10	54586055	.	TGTG	T	122.19	PASS	AB=0.982;AC=10;AF=0.200;AN=50;BaseQRankSum=6.181;DP=864;FS=1.766;HRun=0;HaplotypeScore=151.9091;InbreedingCoeff=0.0258;MQ=34.54;MQ0=111;MQRankSum=-6.881;QD=0.49;ReadPosRankSum=-1.766;VQSLOD=2.7070;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:60,0:53:99:0,100,2031	0/0:10,0:6:1.73:0,2,137	0/0:49,0:3:9.03:0,9,115	0/0:56,0:5:13.85:0,14,229	./.	0/0:6,0:4:4.82:0,5,58	0/1:32,1:20:10.32:10,0,113	0/1:68,3:35:1.89:2,0,800	0/0:16,0:8:4.79:0,5,83	0/1:33,1:20:98.95:99,0,454	0/1:7,0:3:0:0,0,0	0/0:55,0:48:99:0,101,1966	0/0:39,0:32:80:0,80,1505	1/1:13,1:5:5.99:60,6,0	./.	0/0:23,0:19:35.99:0,36,659	0/0:42,0:41:87.11:0,87,1716	0/0:32,0:30:43.93:0,44,1465	0/1:29,0:12:11.29:11,0,270	0/1:15,0:9:3.51:4,0,63	0/0:99,0:49:4.30:0,4,60	0/0:26,0:22:54.06:0,54,1091	0/1:17,0:11:1.31:1,0,149	0/0:69,1:62:99:0,117,2382	0/0:7,0:3:5.95:0,6,54	0/1:26,1:15:50.45:50,0,236	0/0:6,0:4:9.03:0,9,169	./.
chr10	54586058	.	GGT	G	69.09	PASS	AB=0.948;AC=14;AF=0.280;AN=50;BaseQRankSum=6.343;DP=885;FS=0.000;HRun=0;HaplotypeScore=139.7003;InbreedingCoeff=-0.1187;MQ=34.18;MQ0=123;MQRankSum=-4.712;QD=0.19;ReadPosRankSum=-0.070;VQSLOD=2.1457;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:60,1:54:98.29:0,98,1472	0/1:10,0:6:1.19:1,0,89	0/0:48,0:3:2.98:0,3,22	0/0:54,0:5:4.85:0,5,109	./.	0/1:4,1:4:29.97:30,0,42	0/1:24,1:19:3.30:3,0,150	0/0:74,0:34:37.57:0,38,614	0/1:10,1:7:20.23:20,0,55	0/1:33,1:21:8.26:8,0,312	./.	0/0:55,1:48:54.89:0,55,1125	0/1:39,1:33:10.96:11,0,869	1/1:12,3:6:7.20:34,7,0	0/1:9,0:3:0:0,0,0	0/0:25,0:20:38.21:0,38,503	0/0:39,3:39:7.45:0,7,1137	0/1:31,2:31:6.77:7,0,913	0/0:30,0:11:10.85:0,11,146	0/1:14,0:8:8.12:8,0,41	0/1:92,1:49:5.98:6,0,38	0/0:28,0:23:54.15:0,54,809	0/1:15,0:10:3.01:3,0,89	0/0:62,4:59:62.30:0,62,1480	0/0:6,0:3:5.93:0,6,50	0/1:23,2:16:65.99:66,0,148	0/0:7,0:4:6.02:0,6,98	./.
chr10	54586075	.	GGTA	G	75.88	PASS	AB=0.968;AC=8;AF=0.154;AN=52;BaseQRankSum=5.886;DP=844;FS=0.000;HRun=0;HaplotypeScore=135.5610;InbreedingCoeff=0.0725;MQ=34.40;MQ0=127;MQRankSum=-4.492;QD=0.28;ReadPosRankSum=-2.356;VQSLOD=1.8832;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:63,0:52:99:0,103,2343	0/0:12,0:8:12.36:0,12,142	0/0:40,0:1:3.01:0,3,44	0/0:42,0:4:7.57:0,8,132	./.	0/1:9,0:5:0.30:0,0,99	0/0:31,1:18:4.19:0,4,360	0/1:71,4:33:38.78:39,0,1140	0/0:15,0:8:8.64:0,9,137	0/1:31,2:17:52.80:53,0,568	0/1:5,0:3:0:0,0,0	0/0:47,1:42:89.39:0,89,1882	0/0:34,0:29:66.16:0,66,1427	1/1:16,0:6:1.14:32,1,0	0/0:8,2:4:0.78:0,1,2	0/0:27,0:20:38.99:0,39,738	0/0:37,0:34:87.27:0,87,1961	0/0:33,0:32:81.21:0,81,1714	0/0:35,1:9:15.05:0,15,232	0/0:10,0:6:5.05:0,5,57	0/1:86,5:43:22.93:23,0,60	0/0:28,0:21:56.89:0,57,1227	0/0:13,0:10:15:0,15,249	0/0:66,1:58:99:0,133,2835	0/0:9,0:4:6.02:0,6,98	0/1:25,1:13:40.87:41,0,154	0/0:5,0:3:6.02:0,6,96	./.
chr10	54586082	.	G	GGT	81.11	PASS	AB=0.948;AC=11;AF=0.262;AN=42;BaseQRankSum=7.202;DP=846;FS=1.843;HRun=0;HaplotypeScore=128.7661;InbreedingCoeff=-0.0317;MQ=34.76;MQ0=126;MQRankSum=-7.263;QD=0.26;ReadPosRankSum=-1.868;VQSLOD=2.0203;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:63,1:53:53.23:0,53,853	0/0:9,0:6:2.84:0,3,14	./.	./.	./.	0/1:9,0:5:4.35:4,0,30	0/1:27,0:16:6.66:7,0,158	0/1:69,1:31:39.80:40,0,211	1/1:14,0:8:1.32:3,1,0	0/0:30,0:13:2.02:0,2,130	./.	0/0:51,0:43:47.82:0,48,558	0/0:35,0:29:47.50:0,47,536	0/1:16,0:7:9.73:10,0,14	1/1:10,0:5:2.80:7,3,0	0/0:24,0:17:35.93:0,36,399	0/0:37,4:38:60.18:0,60,719	0/1:29,3:31:87.45:87,0,523	0/0:36,0:9:2.90:0,3,36	./.	0/1:82,0:44:0.99:1,0,14	0/0:29,0:23:36.11:0,36,430	0/0:14,0:11:12.04:0,12,144	0/0:64,0:58:86.35:0,86,1067	0/0:8,0:4:3.01:0,3,36	0/1:24,0:14:15.29:33,0,15	./.	./.
chr10	54586101	.	GGTA	G	38.01	PASS	AB=0.986;AC=9;AF=0.180;AN=50;BaseQRankSum=4.971;DP=638;FS=10.302;HRun=0;HaplotypeScore=131.3626;InbreedingCoeff=0.0880;MQ=41.69;MQ0=67;MQRankSum=-4.144;QD=0.28;ReadPosRankSum=-4.591;VQSLOD=0.3103;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:44:95.19:0,95,2215	0/0:7,0:5:7.26:0,7,103	0/1:44,0:5:21.73:22,0,121	0/0:37,1:2:0.45:0,0,1	0/0:5,0:3:0:0,0,0	1/1:5,0:2:5.70:31,6,0	0/1:21,0:14:29.24:29,0,427	0/0:48,1:19:37.18:0,37,609	0/1:15,0:10:24.02:24,0,96	0/1:15,2:10:16.28:16,0,293	0/1:4,0:2:0:0,0,0	0/0:38,0:34:63.21:0,63,1456	0/0:25,0:22:51.11:0,51,1171	0/1:13,0:6:16.03:16,0,71	0/0:8,1:7:12.92:0,13,100	0/0:26,0:20:48.16:0,48,1052	0/0:45,0:40:93.25:0,93,2232	0/0:32,0:30:76.01:0,76,1589	0/0:12,2:6:3.01:0,3,60	./.	0/0:54,4:27:5.32:0,5,39	0/0:18,0:17:51.17:0,51,1169	0/0:13,1:12:15.05:0,15,360	0/0:56,0:52:99:0,115,2755	0/0:6,0:3:6.02:0,6,117	0/1:16,0:11:24.52:25,0,84	./.	./.
chr10	54586132	.	GGTC	G	168.01	PASS	AB=0.938;AC=10;AF=0.185;AN=54;BaseQRankSum=5.986;DP=534;FS=24.178;HRun=0;HaplotypeScore=127.7025;InbreedingCoeff=0.1077;MQ=45.02;MQ0=50;MQRankSum=-5.618;QD=1.95;ReadPosRankSum=0.881;VQSLOD=0.3632;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,1:40:99:0,114,2603	0/0:6,0:4:12.04:0,12,293	0/0:43,0:5:11.99:0,12,151	0/0:44,0:5:11.98:0,12,126	0/0:4,0:2:5.96:0,6,53	0/0:5,0:4:6.90:0,7,50	0/1:12,2:9:73.31:73,0,126	0/1:17,2:8:10.87:11,0,93	0/1:11,1:10:52.46:52,0,155	0/0:8,0:6:10.18:0,10,111	0/1:1,0:1:0:0,0,0	0/0:27,0:26:57.09:0,57,1354	0/0:21,0:20:44.94:0,45,1023	1/1:5,2:4:8.76:79,9,0	0/1:9,1:8:60.16:60,0,108	0/0:25,0:23:52.61:0,53,1329	0/0:43,1:40:99:0,117,2661	0/0:30,0:26:72.08:0,72,1623	0/0:15,0:10:0.08:0,0,213	0/1:1,0:1:0:0,0,0	0/0:38,1:27:13.84:0,14,269	0/0:16,0:15:42.12:0,42,973	0/0:14,0:12:27.07:0,27,601	0/0:58,0:56:99:0,135,3192	0/1:6,0:4:3.37:3,0,38	0/1:13,2:11:14.24:14,0,140	0/0:2,0:2:6.02:0,6,100	./.
chr10	54586133	.	GTC	G	68.42	PASS	AB=0.931;AC=12;AF=0.222;AN=54;BaseQRankSum=6.745;DP=531;FS=10.615;HRun=0;HaplotypeScore=122.4173;InbreedingCoeff=0.0993;MQ=45.09;MQ0=49;MQRankSum=-6.125;QD=0.82;ReadPosRankSum=0.304;VQSLOD=1.8758;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:40:99:0,114,2136	0/0:6,0:4:12.04:0,12,230	0/0:42,0:5:2.12:0,2,69	0/0:42,0:5:11.95:0,12,154	0/0:4,0:2:5.74:0,6,38	0/1:6,0:5:11.83:12,0,26	0/1:12,0:9:8.79:9,0,80	0/0:20,0:8:10.80:0,11,73	0/1:11,1:10:23.62:24,0,115	0/1:9,1:6:14.87:15,0,55	0/1:1,0:1:0:0,0,0	0/0:26,1:26:54.08:0,54,1027	0/0:21,0:20:45.12:0,45,775	1/1:6,1:4:8.45:56,8,0	0/1:8,2:8:27.73:28,0,69	0/0:25,0:23:57.49:0,57,1085	0/0:43,0:39:99:0,111,2028	0/0:29,1:26:31.05:0,31,1125	0/0:14,0:10:20.81:0,21,191	1/1:0,1:1:2.50:9,2,0	0/0:37,2:27:19.17:0,19,185	0/0:16,0:15:42.13:0,42,741	0/0:15,0:12:27.06:0,27,444	0/0:58,0:56:99:0,132,2424	0/1:5,1:4:8.70:9,0,18	0/1:17,0:11:45.90:46,0,53	0/0:2,0:2:6.02:0,6,67	./.
chr10	54586160	.	TTG	T	3926.86	PASS	AB=0.844;AC=10;AF=0.200;AN=50;BaseQRankSum=-3.209;DP=596;FS=0.427;HRun=0;HaplotypeScore=143.0211;InbreedingCoeff=0.5976;MQ=39.72;MQ0=86;MQRankSum=4.872;QD=25.33;ReadPosRankSum=3.750;VQSLOD=4.6491;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:19,29:41:99:1442,114,0	1/1:3,2:4:9.03:119,9,0	./.	0/0:43,0:4:11.99:0,12,163	0/0:6,0:3:5.86:0,6,87	0/0:8,0:6:13.86:0,14,199	0/0:23,0:16:31.65:0,32,484	0/0:27,0:19:34.64:0,35,668	0/0:10,0:9:3.30:0,3,269	0/1:12,0:8:7.51:8,0,120	./.	0/0:31,0:30:78.26:0,78,1278	0/0:17,0:15:42.14:0,42,697	0/0:7,0:4:3.01:0,3,35	0/0:10,0:9:24.07:0,24,336	1/1:6,14:19:44.90:579,45,0	1/1:13,23:33:69.84:1168,70,0	0/1:17,14:26:99:611,0,104	0/0:26,0:13:23.67:0,24,348	0/0:4,0:3:2.06:0,2,50	0/0:47,0:40:55.58:0,56,668	0/0:25,0:21:42.12:0,42,642	0/0:21,0:17:31.34:0,31,452	0/0:58,0:54:99:0,120,1985	0/0:9,0:8:22.62:0,23,345	0/0:20,0:13:26.22:0,26,402	0/0:2,0:2:6.02:0,6,102	./.
chr10	54586167	.	TG	T	154.87	PASS	AB=0.991;AC=9;AF=0.180;AN=50;BaseQRankSum=2.557;DP=604;FS=3.535;HRun=1;HaplotypeScore=151.7612;InbreedingCoeff=0.4168;MQ=39.71;MQ0=97;MQRankSum=2.726;QD=1.08;ReadPosRankSum=4.457;VQSLOD=-0.5924;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:48,0:41:41.69:143,42,0	1/1:5,0:5:3.38:8,3,0	./.	0/0:48,1:4:12.04:0,12,186	0/0:8,0:5:5.89:0,6,85	0/0:10,0:7:15.88:0,16,200	0/0:23,0:15:16.75:0,17,431	0/0:30,1:20:31.71:0,32,686	0/0:8,0:8:13.53:0,14,251	0/0:13,0:7:2.51:0,3,111	./.	0/0:30,0:29:75.30:0,75,1184	0/0:18,0:15:45.15:0,45,708	0/0:6,0:3:3.01:0,3,42	0/0:10,0:9:24.07:0,24,327	1/1:18,1:18:22.02:66,22,0	0/1:36,1:34:37.49:51,0,37	0/1:31,0:27:12.22:12,0,189	0/0:27,0:14:7.36:0,7,428	0/1:4,0:3:14.12:14,0,42	0/0:52,0:42:57.09:0,57,642	0/0:27,0:23:47.90:0,48,633	0/0:18,1:15:33.87:0,34,426	0/0:56,0:52:99:0,135,2102	0/0:11,0:9:22.31:0,22,320	0/0:20,0:14:33:0,33,440	0/0:2,0:2:6.02:0,6,95	./.
chr10	54586188	.	GAT	G	2200.04	PASS	AB=0.785;AC=24;AF=0.462;AN=52;BaseQRankSum=3.293;DP=574;FS=43.582;HRun=0;HaplotypeScore=119.0513;InbreedingCoeff=0.7000;MQ=38.33;MQ0=89;MQRankSum=-6.200;QD=9.36;ReadPosRankSum=-2.536;VQSLOD=0.8362;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,2:38:93.10:0,93,1762	0/0:7,1:6:12.31:0,12,174	0/1:61,0:2:0:0,0,0	0/0:67,0:3:6.02:0,6,122	0/1:1,3:3:0:0,0,0	1/1:1,5:6:14.51:172,15,0	1/1:8,6:9:20.97:266,21,0	1/1:19,4:15:38.98:463,39,0	1/1:2,4:6:17.83:165,18,0	0/1:9,1:9:32.33:52,0,32	./.	0/0:25,0:26:71.91:0,72,1262	0/0:13,0:13:39.12:0,39,730	0/0:0,2:1:0:0,0,0	1/1:2,3:4:9.03:136,9,0	0/0:18,0:18:42.42:0,42,768	0/0:35,0:33:90.15:0,90,1534	0/0:24,1:22:42.97:0,43,1062	1/1:13,5:13:26.13:289,26,0	1/1:1,1:3:5.93:66,6,0	1/1:28,13:37:2.66:254,3,0	0/0:20,1:20:29.86:0,30,424	0/0:17,2:17:27.03:0,27,446	0/0:51,0:48:99:0,123,2138	1/1:4,5:8:18.95:277,19,0	0/1:12,5:11:3.33:178,0,3	1/1:1,1:2:5.95:66,6,0	./.
chr10	54586201	.	GGTA	G	194.77	PASS	AB=0.965;AC=20;AF=0.370;AN=54;BaseQRankSum=8.110;DP=600;FS=33.480;HRun=0;HaplotypeScore=131.9093;InbreedingCoeff=0.4231;MQ=37.55;MQ0=82;MQRankSum=-3.866;QD=1.02;ReadPosRankSum=-0.483;VQSLOD=0.6406;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:46:92.99:0,93,1591	0/0:10,0:7:11.42:0,11,155	0/0:50,0:2:2.04:0,2,29	0/0:54,3:2:6.02:0,6,126	0/0:8,0:6:2.63:0,3,14	1/1:8,0:8:11.32:63,11,0	1/1:18,0:12:0.19:11,0,0	0/1:31,1:18:8.63:9,0,271	1/1:6,1:6:1.66:4,2,0	0/1:18,0:11:46.21:46,0,86	./.	0/0:29,0:28:41.46:0,41,1081	0/0:20,0:16:48.16:0,48,976	0/0:5,1:2:0:0,0,0	1/1:3,0:4:10.18:52,10,0	0/0:15,0:16:36.01:0,36,571	0/0:32,1:31:81:0,81,1230	0/0:27,0:25:63.05:0,63,975	1/1:12,1:9:11.88:50,12,0	1/1:9,1:6:2.36:8,2,0	0/1:41,1:33:11.55:12,0,49	0/0:23,0:21:23.91:0,24,530	0/0:20,0:17:15.05:0,15,317	0/0:46,1:42:99:0,107,2042	1/1:9,1:10:14.72:71,15,0	0/1:19,1:11:28.09:28,0,72	0/0:3,0:3:3.80:0,4,47	1/1:2,0:2:1.82:5,2,0
chr10	54586204	.	ATG	A	1140.71	PASS	AB=0.982;AC=20;AF=0.417;AN=48;BaseQRankSum=-1.618;DP=605;FS=28.741;HRun=0;HaplotypeScore=120.3690;InbreedingCoeff=0.2994;MQ=36.94;MQ0=79;MQRankSum=2.020;QD=3.89;ReadPosRankSum=2.308;VQSLOD=0.8771;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:40,9:45:20.12:301,20,0	1/1:9,1:7:3.01:33,3,0	0/0:50,0:2:1.25:0,1,3	./.	0/0:11,0:6:1.14:0,1,3	1/1:9,0:8:2.40:10,2,0	0/0:19,0:12:2.80:0,3,7	0/0:29,0:15:5.87:0,6,14	./.	0/0:21,0:11:7.12:0,7,20	./.	0/1:28,0:25:44.48:44,0,202	0/0:20,0:16:18.03:0,18,249	0/0:5,0:2:0:0,0,0	0/1:5,0:4:0.01:9,0,0	1/1:12,2:14:6.02:67,6,0	1/1:25,9:33:47.90:490,48,0	1/1:20,5:24:21.17:244,21,0	0/1:15,0:9:8.13:8,0,13	./.	0/0:48,0:36:3.74:0,4,12	0/0:26,0:22:26.85:0,27,381	0/1:20,1:18:21.46:21,0,125	0/1:42,1:40:22.01:22,0,397	1/1:13,0:10:3.88:24,4,0	0/1:22,0:11:0.73:9,0,1	0/0:3,0:3:1.25:0,1,3	0/0:4,0:4:8.72:0,9,50
chr10	54586212	.	GT	G	790.27	PASS	AB=0.842;AC=17;AF=0.315;AN=54;BaseQRankSum=3.283;DP=633;FS=1.377;HRun=1;HaplotypeScore=113.4895;InbreedingCoeff=-0.0245;MQ=37.67;MQ0=70;MQRankSum=-6.535;QD=3.45;ReadPosRankSum=-1.113;VQSLOD=-0.2034;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:44:79.96:0,80,835	0/0:12,0:9:12.40:0,12,124	0/0:46,0:2:6.02:0,6,70	0/0:55,0:6:14.79:0,15,200	1/1:8,3:6:3.01:42,3,0	0/1:8,4:10:9.85:10,0,74	0/1:15,3:11:75.74:76,0,132	0/1:31,6:20:99:222,0,193	0/1:6,2:3:13.94:14,0,32	0/1:18,4:12:60.51:165,0,61	./.	0/0:27,0:24:40.41:0,40,605	0/0:21,0:17:48.16:0,48,679	0/1:3,2:2:0:0,0,0	0/1:5,1:5:46.50:46,0,64	0/0:19,0:19:39.75:0,40,462	0/0:39,0:39:81.02:0,81,664	0/0:26,0:24:49.68:0,50,481	0/1:12,1:7:6.19:6,0,107	0/0:8,4:7:3.01:0,3,38	0/1:43,7:36:40.19:40,0,137	0/0:31,0:27:35.96:0,36,532	0/0:18,1:17:16.87:0,17,225	0/0:43,0:38:82.18:0,82,1064	0/1:13,1:10:85.67:86,0,129	0/1:19,5:14:86.24:154,0,86	1/1:1,2:3:4.26:45,4,0	1/1:2,2:4:1.64:35,2,0
chr10	54586368	.	T	TA	5168.68	PASS	AB=1.000;AC=33;AF=0.589;AN=56;BaseQRankSum=-9.593;DP=350;FS=1.602;HRun=9;HaplotypeScore=43.9619;InbreedingCoeff=0.8095;MQ=78.83;MQ0=0;MQRankSum=-0.077;QD=22.97;ReadPosRankSum=0.055;VQSLOD=5.3062;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:29:73.95:0,74,621	0/0:3,0:3:9:0,9,78	0/1:20,0:11:12:12,0,105	0/0:22,0:16:1.70:0,2,97	1/1:2,13:13:16.59:315,17,0	1/1:2,11:13:24.06:266,24,0	1/1:2,10:12:30.08:332,30,0	1/1:5,19:24:62.83:664,63,0	1/1:0,2:2:6.02:66,6,0	1/1:0,13:13:35.87:369,36,0	1/1:0,11:10:24.06:265,24,0	0/0:4,0:4:12:0,12,104	0/0:3,0:3:6:0,6,52	1/1:0,4:4:9.02:100,9,0	1/1:2,6:8:15.04:166,15,0	0/0:4,0:4:6:0,6,52	0/0:26,0:26:68.98:0,69,599	0/0:18,1:19:26.30:0,26,432	1/1:8,14:22:39.95:506,40,0	1/1:2,11:12:30.03:317,30,0	1/1:0,10:10:27.07:299,27,0	0/0:4,0:4:12:0,12,104	0/0:5,0:5:15:0,15,130	0/0:4,0:4:9:0,9,78	1/1:4,16:19:45.12:497,45,0	1/1:4,17:21:51.14:563,51,0	1/1:0,9:9:27.07:299,27,0	1/1:4,4:8:12.03:133,12,0
chr10	54587318	.	CAGAA	C	17098.39	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=19.401;DP=699;FS=10.764;HRun=0;HaplotypeScore=146.8874;InbreedingCoeff=0.9915;MQ=98.49;MQ0=0;MQRankSum=-15.365;QD=50.89;ReadPosRankSum=-0.710;VQSLOD=5.5509;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,138,3899	0/0:11,0:11:33.10:0,33,894	0/0:37,0:37:99:0,111,2984	0/0:41,0:41:99:0,123,3258	1/1:0,20:20:41.83:657,42,0	1/1:0,26:26:66.16:1337,66,0	1/1:0,24:24:57.20:1193,57,0	1/1:0,21:21:63.19:1246,63,0	1/1:0,26:26:69.24:1446,69,0	1/1:0,19:19:54.11:974,54,0	1/1:1,16:17:38.95:672,39,0	0/0:23,0:23:69.24:0,69,2000	0/0:22,0:22:66.23:0,66,1859	1/1:0,15:15:45.15:943,45,0	1/1:0,27:27:78.27:1634,78,0	0/0:28,1:29:24.37:0,24,2372	0/0:41,0:41:99:0,123,3500	0/0:10,0:10:30.10:0,30,846	1/1:0,19:19:57.11:935,57,0	1/1:0,22:22:60.95:1099,61,0	1/1:0,23:23:47.25:866,47,0	0/0:31,0:31:93.31:0,93,2544	0/0:38,0:38:99:0,111,3160	0/0:34,0:34:99:0,102,2915	1/1:0,23:23:45.15:942,45,0	1/1:0,30:30:90.26:1770,90,0	1/1:0,20:20:57.20:1195,57,0	1/1:0,4:4:9.03:189,9,0
chr10	54588730	.	TTATA	T	1582.18	PASS	AB=0.832;AC=19;AF=0.380;AN=50;BaseQRankSum=3.268;DP=268;FS=20.487;HRun=0;HaplotypeScore=70.6106;InbreedingCoeff=0.5278;MQ=27.64;MQ0=45;MQRankSum=-2.543;QD=10.69;ReadPosRankSum=0.784;VQSLOD=1.1201;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:35.12:0,35,475	0/0:7,0:7:15.05:0,15,254	./.	./.	1/1:6,3:7:9.03:144,9,0	0/1:11,5:14:7.72:88,0,8	./.	0/1:11,5:17:99:235,0,213	1/1:10,2:9:11.25:135,11,0	1/1:8,4:11:11.51:236,12,0	1/1:7,2:7:3.90:43,4,0	0/0:10,0:10:21.05:0,21,471	0/0:7,0:6:15.05:0,15,369	0/1:7,1:8:37.68:38,0,43	1/1:5,2:5:1.10:90,1,0	0/0:3,0:3:3.01:0,3,47	0/0:9,0:9:21.07:0,21,410	0/0:11,0:10:24.08:0,24,528	0/0:10,0:9:21.04:0,21,379	0/0:10,0:10:18.06:0,18,340	0/0:7,0:4:3.01:0,3,46	0/0:3,0:3:6.02:0,6,97	0/0:6,0:6:12.04:0,12,237	0/0:5,0:2:3.01:0,3,80	1/1:7,7:13:10.24:308,10,0	1/1:12,9:18:24.44:359,24,0	0/0:9,0:6:5.05:0,5,58	1/1:11,3:8:9.28:78,9,0
chr10	54588736	.	AT	A	1059.36	PASS	AB=0.843;AC=25;AF=0.481;AN=52;BaseQRankSum=8.533;DP=219;FS=1.484;HRun=1;HaplotypeScore=53.5502;InbreedingCoeff=0.5591;MQ=28.33;MQ0=33;MQRankSum=-0.065;QD=6.97;ReadPosRankSum=-0.634;VQSLOD=0.3144;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:13,3:14:72.13:72,0,264	0/0:6,0:6:14.98:0,15,209	0/0:1,0:1:3.01:0,3,36	./.	1/1:5,2:6:9.62:40,10,0	1/1:10,5:14:22.34:173,22,0	./.	1/1:17,3:13:2.12:115,2,0	1/1:5,6:8:16.20:86,16,0	1/1:5,2:6:13.72:79,14,0	1/1:5,2:5:5.34:28,5,0	0/0:9,0:8:19.88:0,20,292	0/0:6,0:5:15.05:0,15,238	1/1:4,3:6:10.83:148,11,0	1/1:4,0:4:8.86:92,9,0	0/0:1,0:1:2.96:0,3,19	0/0:9,0:8:19.59:0,20,262	0/0:10,0:9:24.05:0,24,356	0/1:9,1:8:19.44:19,0,222	0/0:7,0:7:17.99:0,18,255	0/0:4,0:3:2.92:0,3,17	0/0:3,0:3:5.95:0,6,66	0/0:4,0:4:12.04:0,12,191	0/0:4,0:2:3.01:0,3,48	1/1:10,2:11:20.28:122,20,0	1/1:13,3:14:27.86:161,28,0	0/1:5,2:5:38.72:43,0,39	1/1:9,4:8:11.31:66,11,0
chr10	54588737	.	T	TA	1435.49	PASS	AB=1.000;AC=25;AF=0.521;AN=48;BaseQRankSum=8.664;DP=238;FS=3.321;HRun=2;HaplotypeScore=59.1291;InbreedingCoeff=0.5802;MQ=29.03;MQ0=33;MQRankSum=-2.461;QD=8.81;ReadPosRankSum=-0.564;VQSLOD=0.9934;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:16,0:14:83.15:83,0,188	0/0:5,0:5:12.04:0,12,148	0/0:1,0:1:3.01:0,3,37	./.	1/1:6,1:6:7.84:48,8,0	1/1:11,4:14:20.54:209,21,0	./.	1/1:22,0:15:31.13:184,31,0	1/1:11,0:8:17.12:120,17,0	1/1:9,0:8:12.82:86,13,0	1/1:6,1:5:2.85:30,3,0	0/0:8,0:7:16.83:0,17,221	0/0:6,0:5:15.05:0,15,184	1/1:6,1:6:15.43:133,15,0	1/1:3,2:5:9.80:58,10,0	./.	0/0:8,0:14:9.68:0,10,173	0/0:9,0:14:17.92:0,18,252	0/1:13,0:10:99:127,0,155	0/0:6,0:6:15.05:0,15,183	./.	0/0:3,0:3:3.01:0,3,37	0/0:4,0:4:12.04:0,12,148	0/0:4,0:2:3.01:0,3,37	1/1:11,1:11:19.14:109,19,0	1/1:14,2:14:28.71:198,29,0	0/1:7,0:5:28.13:43,0,28	1/1:15,1:11:20.66:188,21,0
chr10	54588768	.	T	TAAAA	3446.05	PASS	AB=1.000;AC=34;AF=0.654;AN=52;BaseQRankSum=6.740;DP=219;FS=13.890;HRun=3;HaplotypeScore=82.4211;InbreedingCoeff=0.6887;MQ=61.34;MQ0=3;MQRankSum=-7.905;QD=25.15;ReadPosRankSum=2.490;VQSLOD=-0.4152;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:12,0:11:62.89:114,0,63	./.	0/0:9,0:9:19.77:0,20,222	0/0:9,0:5:11.94:0,12,93	1/1:5,1:6:6.79:80,7,0	1/1:9,4:12:26.97:456,27,0	1/1:6,0:6:17.80:120,18,0	1/1:6,0:6:18.01:225,18,0	1/1:5,2:7:15.02:345,15,0	1/1:10,0:10:18.14:194,18,0	1/1:2,1:3:3.01:66,3,0	0/0:13,0:13:38.91:0,39,449	0/0:9,0:9:24.01:0,24,299	1/1:8,0:9:23.85:336,24,0	1/1:1,2:3:8.99:151,9,0	0/0:5,0:5:5.84:0,6,35	0/0:20,0:20:4.77:0,5,233	0/1:14,0:13:9.70:10,0,162	1/1:12,0:11:29.87:248,30,0	1/1:2,0:2:5.99:73,6,0	1/1:3,0:3:4.25:29,4,0	./.	0/0:7,0:7:14.96:0,15,184	0/0:10,0:10:26.95:0,27,249	1/1:5,1:6:11.99:179,12,0	1/1:4,2:6:18:288,18,0	1/1:10,0:10:29.78:271,30,0	1/1:7,2:9:17.96:261,18,0
chr10	54589174	.	G	GACAC	9582.51	PASS	AB=0.712;AC=38;AF=0.679;AN=56;BaseQRankSum=0.383;DP=586;FS=0.000;HRun=0;HaplotypeScore=125.2657;InbreedingCoeff=0.5913;MQ=63.52;MQ0=6;MQRankSum=-3.374;QD=21.98;ReadPosRankSum=-0.854;VQSLOD=4.5083;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:24,2:33:18.02:281,18,0	1/1:7,0:7:6.02:104,6,0	0/0:35,0:13:3.01:0,3,46	0/0:36,0:18:2.75:0,3,47	1/1:11,11:25:29.29:540,29,0	1/1:10,13:24:29.84:659,30,0	1/1:11,8:20:26.83:587,27,0	0/1:23,2:26:3.66:218,0,4	0/1:7,12:22:15.06:622,0,15	1/1:18,10:31:44.83:790,45,0	1/1:3,6:10:12.04:285,12,0	0/0:17,0:18:36.12:0,36,552	0/0:11,0:12:24.04:0,24,336	1/1:3,10:13:24.08:575,24,0	0/1:9,7:18:63.23:493,0,63	1/1:12,0:18:21.07:365,21,0	1/1:10,1:15:20.10:324,20,0	1/1:16,0:20:22.60:322,23,0	1/1:25,0:27:45.73:743,46,0	1/1:11,2:18:33.11:649,33,0	1/1:19,1:21:12.02:227,12,0	0/0:15,0:15:21.06:0,21,312	0/0:12,0:14:14.16:0,14,238	0/0:17,0:20:32.90:0,33,455	1/1:5,7:15:23.28:361,23,0	0/1:12,5:21:15.63:344,0,16	1/1:27,0:36:9.28:887,9,0	1/1:4,4:9:11.78:207,12,0
chr10	54589215	.	AT	A	1517.25	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=4.798;DP=534;FS=0.000;HRun=10;HaplotypeScore=96.8610;InbreedingCoeff=0.9659;MQ=66.16;MQ0=2;MQRankSum=-1.899;QD=17.44;ReadPosRankSum=0.069;VQSLOD=3.6105;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:51.06:0,51,537	0/0:7,0:7:18.04:0,18,192	0/0:31,0:20:35.98:0,36,360	0/0:22,0:17:20.54:0,21,206	0/0:26,0:26:56.55:0,57,640	0/0:23,0:23:60.14:0,60,647	0/0:12,0:12:27.07:0,27,299	0/0:23,0:23:66.14:0,66,711	0/0:21,1:22:28.06:0,28,520	0/0:24,0:23:57.11:0,57,616	0/0:16,0:16:42.58:0,43,458	0/0:17,1:18:22.05:0,22,455	0/0:17,0:17:48.11:0,48,521	0/0:15,0:15:36.08:0,36,383	0/0:23,0:23:66.12:0,66,700	0/0:13,0:13:27.06:0,27,290	0/0:14,0:14:39.06:0,39,418	0/0:21,0:21:51.14:0,51,564	1/1:5,18:23:56.97:492,57,0	1/1:5,18:22:47.92:414,48,0	1/1:4,10:13:23.04:228,23,0	0/0:16,0:16:48.11:0,48,520	0/0:12,1:13:7.04:0,7,290	0/0:20,0:20:57.01:0,57,622	0/0:12,0:12:27.07:0,27,299	0/0:23,0:23:63.10:0,63,671	1/1:8,19:27:62.96:543,63,0	0/0:7,0:7:15.01:0,15,149
chr10	54589820	.	GTTTT	G	6678.37	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=3.088;DP=524;FS=5.620;HRun=17;HaplotypeScore=94.1466;InbreedingCoeff=0.9746;MQ=66.06;MQ0=3;MQRankSum=-3.555;QD=20.06;ReadPosRankSum=4.006;VQSLOD=3.4329;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:24:47.90:0,48,613	0/0:6,0:10:21.07:0,21,311	0/0:28,0:15:29.09:0,29,380	0/0:11,0:7:8.97:0,9,82	1/1:9,13:25:24.77:293,25,0	1/1:3,8:11:20.90:263,21,0	1/1:1,17:18:26.99:342,27,0	1/1:10,14:24:12.04:318,12,0	1/1:8,9:18:15.89:193,16,0	1/1:3,7:10:20.94:266,21,0	1/1:6,22:30:63.94:771,64,0	0/0:11,0:11:33.11:0,33,695	0/0:14,0:18:39.13:0,39,732	1/1:7,18:28:41.77:482,42,0	1/1:4,15:20:39.87:493,40,0	0/0:6,0:11:12.04:0,12,168	0/0:7,0:14:35.95:0,36,479	0/0:8,0:21:30.01:0,30,408	1/1:3,11:14:29.74:363,30,0	1/1:16,10:29:45.29:519,45,0	1/1:4,5:11:17.81:198,18,0	0/0:11,0:14:36.10:0,36,598	0/0:17,0:19:33.56:0,34,521	0/0:7,0:8:24:0,24,436	1/1:3,21:25:49.25:607,49,0	1/1:10,18:28:27.25:573,27,0	1/1:12,15:28:14.29:575,14,0	1/1:1,10:12:36.04:422,36,0
chr10	54589924	.	AGAAG	A	14332.37	PASS	AB=0.774;AC=32;AF=0.571;AN=56;BaseQRankSum=15.411;DP=642;FS=8.590;HRun=0;HaplotypeScore=109.8139;InbreedingCoeff=0.8723;MQ=53.41;MQ0=8;MQRankSum=-1.266;QD=38.32;ReadPosRankSum=-1.403;VQSLOD=4.0238;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,114,2848	0/0:6,0:6:15.05:0,15,376	0/1:12,0:10:4.18:4,0,527	0/0:21,0:17:39.13:0,39,912	1/1:0,28:28:56.84:1005,57,0	1/1:0,20:20:48.16:879,48,0	1/1:1,21:21:39.13:713,39,0	1/1:7,19:21:45.11:731,45,0	1/1:2,17:19:48.16:882,48,0	1/1:1,23:23:60.15:1063,60,0	1/1:1,13:14:33.07:571,33,0	0/0:26,0:26:72.25:0,72,1777	0/0:23,0:23:69.21:0,69,1662	1/1:1,24:24:63.22:1158,63,0	1/1:1,18:19:48.16:883,48,0	0/0:13,0:13:39.13:0,39,990	0/0:34,0:34:96.32:0,96,2389	0/0:31,0:31:93.27:0,93,2242	1/1:2,16:16:47.97:681,48,0	1/1:0,26:24:48.12:842,48,0	0/1:4,19:23:31.10:740,0,31	0/0:21,0:21:57.20:0,57,1437	0/0:26,0:25:66.16:0,66,1575	0/0:27,0:27:78.22:0,78,1872	1/1:0,25:24:45.15:827,45,0	1/1:2,29:30:78.25:1401,78,0	1/1:0,31:31:78.27:1434,78,0	1/1:2,9:10:30.08:519,30,0
chr10	54590973	.	A	AC	13488.88	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=18.018;DP=674;FS=1.636;HRun=1;HaplotypeScore=89.2400;InbreedingCoeff=0.9986;MQ=86.79;MQ0=0;MQRankSum=-1.511;QD=36.75;ReadPosRankSum=1.822;VQSLOD=5.2693;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:56:99:0,163,2091	0/0:14,0:14:42.12:0,42,531	0/0:20,0:20:54.16:0,54,673	0/0:26,0:26:74.22:0,74,906	1/1:0,25:25:69.12:935,69,0	1/1:0,16:16:45.15:621,45,0	1/1:1,31:32:78.26:1085,78,0	1/1:1,22:23:66.66:889,67,0	1/1:0,13:13:24.08:332,24,0	1/1:0,29:29:87.26:1178,87,0	1/1:0,16:16:48.02:640,48,0	0/0:23,0:23:60.18:0,60,754	0/0:32,0:32:93.29:0,93,1192	1/1:3,26:29:72.24:1001,72,0	1/1:4,23:27:75.71:1033,76,0	0/0:19,0:19:54.18:0,54,701	0/0:39,0:39:99:0,117,1503	0/0:20,0:20:60.17:0,60,763	1/1:1,20:21:63.21:869,63,0	1/1:1,17:18:48.16:667,48,0	1/1:2,29:31:84.28:1167,84,0	0/0:19,0:19:57.17:0,57,725	0/0:17,0:17:51.15:0,51,647	0/0:22,0:22:63.20:0,63,816	1/1:2,26:28:57.66:790,58,0	1/1:3,26:29:81.73:1112,82,0	1/1:1,23:24:66.22:918,66,0	1/1:0,6:6:18.06:251,18,0
chr10	54591164	.	GAAAAA	G	4517.29	PASS	AB=0.645;AC=25;AF=0.446;AN=56;BaseQRankSum=6.266;DP=535;FS=0.000;HRun=17;HaplotypeScore=110.6567;InbreedingCoeff=0.5421;MQ=59.66;MQ0=1;MQRankSum=-2.980;QD=15.52;ReadPosRankSum=7.904;VQSLOD=1.0937;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:34:87.22:0,87,1888	0/0:8,0:8:18.06:0,18,379	0/0:24,0:10:16.61:0,17,289	0/0:16,0:5:7.52:0,8,119	0/1:5,10:18:4.97:262,0,5	1/1:5,9:14:21:315,21,0	1/1:6,10:18:25.39:297,25,0	0/1:14,3:18:3.79:172,0,4	1/1:2,6:8:11.85:180,12,0	1/1:7,16:25:50.72:677,51,0	0/1:6,10:17:4.28:279,0,4	0/0:15,0:16:33.06:0,33,493	0/0:18,0:18:33.11:0,33,794	1/1:5,11:16:10.06:344,10,0	1/1:10,7:18:10.04:309,10,0	0/0:17,0:17:36.12:0,36,905	0/0:24,0:37:64.99:0,65,1538	0/0:20,0:22:60.09:0,60,1188	0/1:7,0:16:3.73:4,0,140	0/1:8,2:17:56.03:92,0,56	0/1:3,1:17:60.21:84,0,60	0/0:18,0:18:49.55:0,50,804	0/0:16,0:17:36.12:0,36,805	0/0:14,0:14:33.09:0,33,722	1/1:6,6:15:23.34:293,23,0	1/1:8,21:31:61.84:848,62,0	0/1:11,2:22:55.64:91,0,56	1/1:8,12:20:17.60:271,18,0
chr10	54592055	.	C	CTTT	2498.97	PASS	AB=0.776;AC=27;AF=0.482;AN=56;BaseQRankSum=-0.975;DP=472;FS=9.695;HRun=12;HaplotypeScore=71.4709;InbreedingCoeff=0.6084;MQ=70.90;MQ0=5;MQRankSum=-5.104;QD=11.73;ReadPosRankSum=-2.849;VQSLOD=-0.2630;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:78.89:0,79,868	0/0:7,0:7:8.92:0,9,99	0/0:32,0:17:14.64:0,15,141	0/0:27,0:17:11.47:0,11,117	1/1:4,9:14:15.03:178,15,0	1/1:3,9:12:24.08:423,24,0	1/1:3,13:19:21.05:341,21,0	1/1:16,12:27:33.06:478,33,0	1/1:6,5:11:6:78,6,0	0/1:9,8:17:13.06:175,0,13	1/1:4,8:13:14.99:190,15,0	0/0:20,0:21:35.63:0,36,376	0/0:9,0:11:10.30:0,10,131	1/1:5,1:6:2.74:54,3,0	1/1:5,7:12:6.02:110,6,0	0/0:11,0:12:26.87:0,27,268	0/0:31,0:33:67.20:0,67,691	0/0:27,0:26:66.03:0,66,727	0/1:7,0:16:8.78:171,0,9	0/1:9,1:10:7.56:69,0,8	0/1:4,0:9:15.70:96,0,16	0/0:20,0:20:33.78:0,34,361	0/0:16,0:14:19.90:0,20,232	0/0:16,0:17:41.42:0,41,460	1/1:14,1:15:6.02:110,6,0	1/1:5,1:9:12:155,12,0	1/1:6,0:13:10.66:70,11,0	0/1:6,0:5:0:0,0,0
chr10	54592238	.	T	TA	2432.41	PASS	AB=0.825;AC=33;AF=0.589;AN=56;BaseQRankSum=-2.662;DP=477;FS=0.000;HRun=13;HaplotypeScore=68.3355;InbreedingCoeff=0.5182;MQ=78.16;MQ0=4;MQRankSum=-0.234;QD=8.16;ReadPosRankSum=-1.881;VQSLOD=2.2123;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,2:30:21.30:0,21,280	0/0:5,0:5:5.92:0,6,41	0/1:41,1:28:6.51:7,0,63	0/1:26,0:15:27.62:28,0,50	1/1:3,7:11:0.23:125,0,0	1/1:5,13:18:27.03:250,27,0	1/1:2,8:11:6.29:189,6,0	1/1:11,9:20:0.41:140,0,0	1/1:5,5:10:12.01:111,12,0	0/1:3,5:8:5.68:78,0,6	1/1:4,9:15:23.55:169,24,0	0/1:16,2:21:37.49:37,0,161	0/0:12,0:14:27.81:0,28,176	0/1:7,8:15:5.56:96,0,6	1/1:4,8:12:15.02:139,15,0	0/0:16,0:16:20.69:0,21,144	0/0:29,0:33:80.45:0,80,529	0/0:25,0:25:56.46:0,56,390	1/1:3,5:9:17.80:141,18,0	1/1:3,10:14:26.87:237,27,0	1/1:2,12:14:0.51:147,1,0	0/0:20,0:20:35.58:0,36,246	0/0:15,0:19:40.82:0,41,249	0/0:17,0:17:41.58:0,42,285	1/1:1,7:8:6.94:129,7,0	1/1:6,13:19:18.39:299,18,0	1/1:3,12:16:23.91:222,24,0	1/1:3,3:6:9.01:84,9,0
chr10	54592304	.	AAGAGG	A	2327.81	PASS	AB=0.895;AC=15;AF=0.268;AN=56;BaseQRankSum=12.890;DP=668;FS=29.289;HRun=0;HaplotypeScore=228.9411;InbreedingCoeff=-0.3832;MQ=55.24;MQ0=8;MQRankSum=-8.628;QD=8.28;ReadPosRankSum=0.085;VQSLOD=1.1180;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:36,0:37:32.84:33,0,2204	0/0:4,0:4:12.04:0,12,384	0/0:62,0:32:74.80:0,75,1802	0/0:84,0:35:53.49:0,53,2157	0/0:10,0:10:21.07:0,21,603	0/1:17,5:21:99:350,0,817	0/1:16,4:20:99:284,0,1219	0/1:27,1:28:99:170,0,1466	0/1:19,0:19:99:102,0,1303	0/1:18,1:19:23.79:24,0,1362	0/1:14,1:15:20.49:20,0,896	0/0:26,0:28:0.94:0,1,1579	0/0:19,0:18:43.30:0,43,1178	0/1:11,6:17:99:437,0,665	0/1:14,1:15:36.66:37,0,847	0/0:22,0:24:1.92:0,2,1759	0/0:30,0:32:58.69:0,59,2369	0/0:19,0:19:57.20:0,57,1837	0/1:11,1:11:77.97:78,0,490	0/1:23,1:23:0.16:0,0,1435	0/0:18,1:19:22.80:0,23,826	0/0:29,0:30:49.09:0,49,2208	0/0:31,0:35:91.25:0,91,2842	0/0:18,0:20:9.16:0,9,773	0/1:11,4:15:99:233,0,488	0/1:13,3:19:99:404,0,645	0/1:12,2:14:99:214,0,633	0/1:4,1:5:92.29:92,0,204
chr10	54592337	.	AAT	A	286.81	PASS	AB=0.919;AC=12;AF=0.214;AN=56;BaseQRankSum=9.308;DP=434;FS=8.613;HRun=0;HaplotypeScore=155.6535;InbreedingCoeff=-0.2664;MQ=54.11;MQ0=3;MQRankSum=-5.533;QD=1.77;ReadPosRankSum=1.611;VQSLOD=2.2481;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:19.07:0,19,1070	0/0:4,0:4:12.04:0,12,243	0/1:25,0:17:0.79:1,0,626	0/0:45,1:21:44.40:0,44,852	0/0:8,0:8:15.47:0,15,231	0/0:13,0:13:15.40:0,15,474	0/1:12,0:12:25.38:25,0,399	0/0:13,0:13:35.99:0,36,684	0/1:15,2:17:45.30:45,0,736	0/0:13,1:14:38.15:0,38,735	0/0:7,1:8:13.85:0,14,249	0/1:17,2:19:61.71:62,0,398	0/1:14,1:15:39.08:39,0,250	0/1:11,1:12:66.53:67,0,239	0/0:12,0:12:23.95:0,24,439	0/1:16,0:16:54.06:54,0,569	0/0:22,0:22:21.04:0,21,1006	0/0:15,0:15:39.13:0,39,785	0/1:2,1:3:26.18:26,0,68	0/0:16,0:16:44.97:0,45,702	0/0:11,0:11:12.04:0,12,243	0/0:22,1:23:34.89:0,35,707	0/0:34,0:34:44.94:0,45,1034	0/1:16,0:16:18.51:19,0,266	0/1:8,1:9:7.86:8,0,229	0/1:6,4:10:50.11:50,0,273	0/1:7,0:7:36.63:37,0,112	0/0:4,0:4:7.32:0,7,134
chr10	54592346	.	G	GGA	1148.73	PASS	AB=0.894;AC=18;AF=0.321;AN=56;BaseQRankSum=9.577;DP=352;FS=0.000;HRun=0;HaplotypeScore=138.2696;InbreedingCoeff=-0.4794;MQ=48.64;MQ0=1;MQRankSum=-3.121;QD=5.32;ReadPosRankSum=-0.452;VQSLOD=2.9615;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:26,1:27:9.68:10,0,530	0/0:4,0:4:12.04:0,12,183	0/0:12,0:9:14.16:0,14,136	0/0:25,0:11:17.49:0,17,243	0/0:6,0:6:6:0,6,91	0/1:6,2:8:74.64:75,0,208	0/0:13,0:13:20.97:0,21,256	0/1:7,2:9:67.51:68,0,294	0/1:12,1:13:62.76:63,0,391	0/1:12,1:13:86.01:86,0,392	0/1:6,0:6:55.39:55,0,82	0/1:17,2:19:99:146,0,206	0/1:12,1:13:14.85:15,0,88	0/1:6,4:10:99:255,0,111	0/0:11,0:11:21.01:0,21,261	0/1:16,1:17:14.39:14,0,394	0/1:18,1:19:25.30:25,0,336	0/0:11,0:12:16.46:0,16,346	0/1:3,0:3:36.88:57,0,37	0/0:13,0:13:15.24:0,15,284	0/0:11,0:11:8.50:0,9,76	0/1:19,1:20:48.74:49,0,265	0/0:28,1:29:26.29:0,26,296	0/1:12,1:13:8.36:8,0,116	0/1:6,2:8:40.39:40,0,168	0/1:8,0:8:99:151,0,140	0/1:5,2:7:51.80:77,0,52	0/1:2,1:3:16.81:112,0,17
chr10	54592425	.	G	GGAAGA	1081.27	PASS	AB=0.849;AC=6;AF=0.107;AN=56;BaseQRankSum=6.152;DP=372;FS=79.449;HRun=0;HaplotypeScore=128.5807;InbreedingCoeff=-0.1369;MQ=54.93;MQ0=1;MQRankSum=-4.189;QD=12.15;ReadPosRankSum=0.742;VQSLOD=-0.1889;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:18,3:21:99:187,0,880	0/0:9,0:9:24.06:0,24,488	0/0:11,0:9:21.07:0,21,362	0/0:11,0:8:6.50:0,7,260	0/0:6,0:6:12.04:0,12,267	0/0:18,0:18:51.16:0,51,1063	0/0:23,0:22:42.15:0,42,1105	0/0:18,0:18:15.68:0,16,742	0/0:16,0:16:45.15:0,45,950	0/0:10,0:10:22.32:0,22,471	0/0:11,0:11:27.09:0,27,574	0/0:10,0:11:12.67:0,13,457	0/0:10,0:10:5.06:0,5,343	0/0:15,0:15:39.13:0,39,809	0/0:24,1:25:69.24:0,69,1518	0/0:14,0:14:36.12:0,36,770	0/1:11,6:17:99:527,0,337	0/1:5,3:8:99:276,0,184	0/1:11,0:10:6:6,0,369	0/0:7,0:7:12.04:0,12,265	0/1:19,1:19:52.55:53,0,494	0/0:16,0:16:40.68:0,41,828	0/0:16,0:16:29.16:0,29,646	0/1:9,3:12:99:153,0,273	0/0:11,0:11:27.09:0,27,583	0/0:7,0:7:18.06:0,18,400	0/0:16,0:15:45.15:0,45,970	0/0:2,0:2:2.99:0,3,23
chr10	54592440	.	A	AGT	13545.64	PASS	AB=1.000;AC=33;AF=0.589;AN=56;BaseQRankSum=6.876;DP=434;FS=25.071;HRun=0;HaplotypeScore=88.1034;InbreedingCoeff=0.8888;MQ=63.61;MQ0=1;MQRankSum=-1.704;QD=48.21;ReadPosRankSum=3.117;VQSLOD=3.7733;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:5.77:0,6,753	0/0:11,0:11:22.29:0,22,430	0/0:15,0:13:39.10:0,39,577	0/0:14,0:11:25.13:0,25,437	1/1:0,10:10:27.09:547,27,0	1/1:1,19:20:51.17:1034,51,0	1/1:3,20:22:54.18:1052,54,0	1/1:5,19:27:78.08:1455,78,0	1/1:0,14:16:42.14:827,42,0	1/1:1,15:16:41.87:843,42,0	1/1:0,11:11:33.11:658,33,0	0/0:11,0:11:27.02:0,27,430	0/0:12,0:11:30.07:0,30,453	1/1:4,16:20:48.16:965,48,0	1/1:5,25:30:75.26:1511,75,0	0/0:13,0:13:36.12:0,36,586	0/1:16,0:16:58.01:58,0,381	0/0:8,0:8:4.99:0,5,231	1/1:4,9:13:36.12:699,36,0	1/1:3,10:13:30.10:587,30,0	1/1:6,16:21:35.86:730,36,0	0/0:13,0:13:36.12:0,36,586	0/0:19,0:19:54.18:0,54,878	0/0:14,0:14:18.56:0,19,448	1/1:0,9:10:30.10:604,30,0	1/1:0,10:10:30.10:602,30,0	1/1:2,15:16:51.17:1016,51,0	1/1:2,5:7:18.06:357,18,0
chr10	54592686	.	CT	C	963.58	PASS	AB=0.955;AC=12;AF=0.214;AN=56;BaseQRankSum=3.808;DP=498;FS=1.674;HRun=13;HaplotypeScore=67.5252;InbreedingCoeff=0.7094;MQ=84.84;MQ0=1;MQRankSum=0.915;QD=8.17;ReadPosRankSum=1.278;VQSLOD=2.7842;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:19:37.27:0,37,319	0/0:6,0:6:15.02:0,15,146	0/0:40,3:27:14.48:0,14,222	0/0:26,0:22:14.26:0,14,177	0/0:22,0:21:54.07:0,54,516	0/0:14,3:19:1.38:0,1,290	0/0:16,1:18:23:0,23,372	0/0:23,1:27:18.79:0,19,461	0/0:11,0:11:8.14:0,8,240	0/0:20,2:22:10.24:0,10,413	0/0:9,1:10:1.95:0,2,160	0/0:16,1:18:16.99:0,17,313	0/1:9,1:10:0.88:1,0,153	1/1:4,13:18:8.81:218,9,0	0/1:17,0:17:9.11:9,0,177	0/0:12,0:12:32.88:0,33,299	0/0:37,0:38:99:0,99,948	0/0:23,0:23:32.36:0,32,465	1/1:11,13:24:12.08:235,12,0	1/1:2,13:15:30.08:253,30,0	1/1:5,14:19:32.75:241,33,0	0/0:9,0:9:24.04:0,24,233	0/0:11,0:11:20.98:0,21,193	0/0:10,0:11:26.88:0,27,248	0/0:9,0:9:21.03:0,21,204	0/0:15,0:15:31.86:0,32,295	1/1:5,10:15:23.82:175,24,0	0/0:11,0:11:30.05:0,30,292
chr10	54594805	.	C	CA	7887.74	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-4.845;DP=775;FS=0.000;HRun=0;HaplotypeScore=104.8131;InbreedingCoeff=0.9880;MQ=63.53;MQ0=3;MQRankSum=-4.620;QD=34.00;ReadPosRankSum=4.069;VQSLOD=4.3383;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:65,0:65:99:0,177,2300	0/0:12,0:12:33.10:0,33,439	0/0:47,0:37:81.45:0,81,977	0/0:29,0:25:44.15:0,44,606	1/1:1,22:23:40.68:572,41,0	1/1:0,21:21:57.19:831,57,0	1/1:1,21:19:36.11:525,36,0	1/1:2,23:24:69.09:873,69,0	1/1:1,22:22:15.35:728,15,0	1/1:0,25:25:75.20:1048,75,0	1/1:0,8:8:9.03:132,9,0	0/0:34,0:34:99:0,99,1242	0/0:32,0:32:96.27:0,96,1286	1/1:0,18:18:42.14:611,42,0	1/1:0,22:22:60.20:875,60,0	0/0:19,1:20:16.27:0,16,697	0/0:44,0:44:99:0,123,1531	0/0:30,0:30:88.24:0,88,1098	0/0:25,0:25:69.20:0,69,883	0/0:19,0:19:57.14:0,57,722	0/0:58,0:58:99:0,162,2036	0/0:28,0:28:75.19:0,75,943	0/0:16,0:16:46.36:0,46,590	0/0:58,0:58:99:0,155,2075	1/1:0,18:18:45.15:657,45,0	1/1:0,15:14:42.14:597,42,0	0/0:26,0:26:77.81:0,78,992	1/1:0,12:12:30.10:438,30,0
chr10	54594904	.	T	TACACACAGAC	12277.06	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=3.520;DP=895;FS=5.233;HRun=0;HaplotypeScore=291.0133;InbreedingCoeff=0.9548;MQ=55.11;MQ0=9;MQRankSum=-9.696;QD=41.48;ReadPosRankSum=-6.133;VQSLOD=3.0190;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,141,3999	0/0:13,0:13:33.10:0,33,947	0/0:50,0:19:23.16:0,23,425	0/0:55,0:24:29.82:0,30,440	1/1:13,9:22:9.03:141,9,0	1/1:18,9:27:38.23:1379,38,0	1/1:16,11:30:3.01:152,3,0	1/1:47,0:47:63.18:1446,63,0	1/1:5,19:23:24.08:1156,24,0	1/1:28,9:37:66.22:2424,66,0	1/1:10,3:13:9.03:219,9,0	0/0:44,0:44:99:0,114,3406	0/0:31,0:31:87.25:0,87,2332	1/1:13,8:21:36.59:1264,37,0	1/1:9,9:18:24.06:611,24,0	0/0:24,0:24:66.23:0,66,1954	0/0:53,0:53:99:0,112,3637	0/0:25,0:25:58.92:0,59,1865	0/0:19,0:19:37.87:0,38,834	0/0:32,0:32:72.23:0,72,1933	0/0:83,0:83:99:0,185,4638	0/0:29,0:29:63.22:0,63,1825	0/0:20,0:20:51.63:0,52,1465	0/0:47,0:47:99:0,114,3284	1/1:6,12:19:15.05:602,15,0	1/1:19,10:28:48.16:2113,48,0	0/0:21,0:21:57:0,57,1389	1/1:3,5:8:18.06:770,18,0
chr10	54597398	.	GT	G	5956.41	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=12.990;DP=569;FS=9.413;HRun=7;HaplotypeScore=77.4254;InbreedingCoeff=0.9741;MQ=82.05;MQ0=0;MQRankSum=-2.183;QD=26.71;ReadPosRankSum=-0.649;VQSLOD=4.8533;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,123,1543	0/0:10,0:10:30.10:0,30,377	0/0:23,1:24:21.11:0,21,594	0/0:18,0:18:54.17:0,54,663	1/1:0,12:12:33.07:337,33,0	1/1:3,19:22:48.11:490,48,0	1/1:1,21:22:54.12:551,54,0	1/1:6,29:35:84.18:856,84,0	1/1:1,21:22:63.14:643,63,0	1/1:0,22:22:63.13:642,63,0	1/1:2,9:11:27.06:275,27,0	0/0:17,0:17:45.14:0,45,566	0/0:12,0:12:33.10:0,33,411	1/1:1,16:17:42.10:428,42,0	1/1:1,21:22:57.12:581,57,0	0/0:7,0:7:21.06:0,21,255	0/0:20,0:20:57.18:0,57,716	0/0:19,0:19:51.16:0,51,641	0/0:24,0:24:51.10:0,51,621	0/0:25,0:25:69.22:0,69,868	0/0:28,0:28:78.25:0,78,981	0/0:26,0:26:63.20:0,63,792	0/0:19,0:19:51.16:0,51,640	0/0:19,0:19:45.14:0,45,566	1/1:0,11:11:33.08:337,33,0	1/1:0,26:26:78.14:786,78,0	0/0:34,0:34:84.23:0,84,1037	1/1:0,1:1:3.01:31,3,0
chr10	54599274	.	G	GCTCAGCTCCCTAGCT	13322.04	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=5.757;DP=464;FS=16.811;HRun=0;HaplotypeScore=167.0991;InbreedingCoeff=0.9245;MQ=77.89;MQ0=0;MQRankSum=-9.511;QD=85.40;ReadPosRankSum=-0.660;VQSLOD=3.0271;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,102,3993	0/0:10,0:10:30.08:0,30,1162	0/0:18,0:18:10.81:0,11,565	0/0:7,0:6:7.89:0,8,290	1/1:0,6:8:12:604,12,0	1/1:0,12:15:18.06:1369,18,0	1/1:1,14:17:12:705,12,0	1/1:22,0:22:66.17:2072,66,0	1/1:0,5:10:9.03:684,9,0	1/1:0,14:18:51.11:2584,51,0	1/1:1,5:9:9.03:684,9,0	0/0:17,0:17:48.05:0,48,1650	0/0:14,0:14:39.09:0,39,1531	1/1:0,14:19:15.05:1141,15,0	1/1:0,8:11:9.03:684,9,0	0/0:17,0:17:48.10:0,48,1759	0/0:37,0:37:99:0,111,4318	0/0:14,0:13:39.11:0,39,1442	0/0:16,0:16:41.94:0,42,1005	0/0:13,0:13:35.78:0,36,1117	0/0:26,0:26:77:0,77,2511	0/0:21,0:21:59.50:0,60,2056	0/0:10,0:10:29.94:0,30,555	0/0:22,0:22:63.16:0,63,2349	1/1:0,8:11:9.03:646,9,0	1/1:0,8:13:39.05:1692,39,0	0/0:31,0:31:90.16:0,90,3074	1/1:0,2:3:6.02:457,6,0
chr10	54600493	.	A	ATT	7098.49	PASS	AB=0.768;AC=24;AF=0.429;AN=56;BaseQRankSum=0.418;DP=719;FS=13.835;HRun=7;HaplotypeScore=91.8052;InbreedingCoeff=-0.7512;MQ=77.81;MQ0=0;MQRankSum=-16.959;QD=11.07;ReadPosRankSum=-1.600;VQSLOD=0.9816;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:22,10:33:99:285,0,631	0/0:11,0:11:21.03:0,21,245	0/0:26,0:26:44.83:0,45,491	0/0:13,0:13:18.53:0,19,237	0/0:28,0:28:72.19:0,72,828	0/1:23,12:36:99:495,0,571	0/1:19,5:24:99:180,0,518	0/1:36,20:56:99:786,0,874	0/1:20,7:27:99:213,0,557	0/1:16,15:31:99:649,0,394	0/1:17,5:22:99:173,0,485	0/1:19,9:28:99:302,0,583	0/1:13,5:18:99:189,0,324	0/1:9,10:19:99:435,0,257	0/1:14,10:24:99:370,0,356	0/1:15,5:20:99:102,0,374	0/1:32,12:44:99:230,0,969	0/1:8,8:16:99:299,0,235	0/1:34,9:44:99:349,0,865	0/1:14,5:19:99:239,0,333	0/1:13,6:19:99:209,0,397	0/1:13,5:18:99:146,0,403	0/1:25,3:28:75.37:75,0,662	0/1:15,4:19:53.31:53,0,395	0/1:18,6:23:99:235,0,429	0/1:20,9:29:99:359,0,580	0/1:12,17:29:99:670,0,260	0/1:12,2:14:56.35:56,0,377
chr10	54600595	.	T	TA	1702.34	PASS	AB=0.934;AC=32;AF=0.571;AN=56;BaseQRankSum=8.376;DP=474;FS=4.885;HRun=14;HaplotypeScore=72.7546;InbreedingCoeff=0.4632;MQ=68.65;MQ0=2;MQRankSum=0.036;QD=5.17;ReadPosRankSum=-0.680;VQSLOD=2.2236;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,1:29:16.67:0,17,227	0/0:5,0:5:7:0,7,54	0/1:13,1:7:8.77:27,0,9	0/1:15,0:8:8.54:9,0,10	1/1:20,0:20:25.75:196,26,0	1/1:20,0:20:42.08:218,42,0	1/1:14,0:14:20.22:102,20,0	1/1:33,0:33:43.98:213,44,0	1/1:16,0:16:25.51:127,26,0	1/1:12,0:12:31.54:136,32,0	1/1:15,0:16:31.32:165,31,0	0/0:25,0:26:34.25:0,34,216	0/1:8,1:9:7.85:8,0,62	1/1:27,0:27:37.41:217,37,0	1/1:21,0:20:27.67:128,28,0	0/0:18,0:20:17.94:0,18,154	0/0:19,1:21:13.17:0,13,207	0/1:12,3:15:23.26:23,0,121	0/1:18,4:24:37.02:37,0,140	0/1:14,0:14:17.89:18,0,74	0/0:13,0:13:20.21:0,20,124	0/1:3,0:3:0:0,0,0	0/0:9,0:9:14.66:0,15,96	0/1:17,1:19:23.86:24,0,83	1/1:8,0:8:8.72:52,9,0	1/1:25,0:25:17.42:139,17,0	0/0:20,0:22:36.41:0,36,221	1/1:4,0:4:11.51:62,12,0
chr10	54600607	.	A	AG	5322.90	PASS	AB=1.000;AC=25;AF=0.446;AN=56;BaseQRankSum=-3.677;DP=467;FS=1.685;HRun=0;HaplotypeScore=54.4121;InbreedingCoeff=0.8706;MQ=68.62;MQ0=2;MQRankSum=2.466;QD=25.97;ReadPosRankSum=4.985;VQSLOD=5.5714;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:95.27:0,95,980	0/1:5,0:5:15.22:15,0,108	0/0:17,0:9:5.42:0,5,88	0/0:14,0:7:12.58:0,13,109	1/1:1,15:17:48.48:550,48,0	1/1:10,14:24:66.03:729,66,0	1/1:1,11:12:15.71:291,16,0	1/1:4,29:33:68.72:808,69,0	1/1:2,13:15:23.43:301,23,0	1/1:0,13:15:42:464,42,0	1/1:1,16:17:47.50:514,48,0	0/0:23,0:23:63.07:0,63,703	0/0:8,0:8:19.86:0,20,220	1/1:2,19:21:39.08:475,39,0	1/1:4,9:13:38.96:429,39,0	0/0:19,1:20:20.38:0,20,533	0/0:21,0:21:52.84:0,53,629	0/0:19,0:19:45.07:0,45,480	0/0:22,0:22:55.92:0,56,589	0/0:14,0:14:36.15:0,36,338	0/0:13,0:13:39.05:0,39,427	0/0:2,0:2:6:0,6,52	0/0:10,0:10:30.05:0,30,334	0/0:24,0:24:50.74:0,51,469	1/1:1,7:8:5.11:73,5,0	1/1:1,16:19:49.80:525,50,0	0/0:18,0:18:48.05:0,48,572	1/1:0,5:5:12.04:150,12,0
chr10	54600822	.	T	TA	5294.16	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=2.346;DP=464;FS=16.640;HRun=7;HaplotypeScore=65.7955;InbreedingCoeff=0.9891;MQ=77.99;MQ0=0;MQRankSum=-7.504;QD=27.72;ReadPosRankSum=-1.714;VQSLOD=3.1474;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,114,1074	0/0:9,0:9:27.04:0,27,261	0/0:16,0:16:33.04:0,33,318	0/0:11,0:10:17.96:0,18,163	1/1:9,14:23:45.13:532,45,0	1/1:3,15:18:51.15:602,51,0	1/1:4,8:12:24.03:274,24,0	1/1:15,29:44:96.27:1137,96,0	1/1:3,6:9:18.06:217,18,0	1/1:2,6:8:18.06:217,18,0	1/1:1,16:17:45.14:542,45,0	0/0:16,0:16:42.07:0,42,406	0/0:11,0:11:27.04:0,27,261	1/1:2,6:8:21.06:254,21,0	1/1:3,8:11:30.09:361,30,0	0/0:9,0:9:21.03:0,21,203	0/0:29,0:29:72.11:0,72,695	0/0:17,0:17:48.08:0,48,464	0/0:14,0:14:33.05:0,33,319	0/0:22,0:22:66.09:0,66,632	0/0:8,0:8:12.01:0,12,116	0/0:14,0:14:36.06:0,36,348	0/0:13,0:13:21.01:0,21,197	0/0:10,0:10:21.01:0,21,197	1/1:3,8:11:27.08:326,27,0	1/1:2,11:13:33.10:398,33,0	0/0:27,0:27:75.12:0,75,724	1/1:4,13:17:36.11:435,36,0
chr10	54600837	.	T	TTA	6240.42	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=3.679;DP=426;FS=6.700;HRun=0;HaplotypeScore=74.0604;InbreedingCoeff=0.9679;MQ=70.22;MQ0=0;MQRankSum=-7.434;QD=34.10;ReadPosRankSum=-2.549;VQSLOD=6.3014;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,103,792	0/0:9,0:9:20.80:0,21,147	0/0:9,0:9:12.01:0,12,136	0/0:9,0:8:11.82:0,12,123	1/1:6,12:18:36.11:574,36,0	1/1:7,15:22:34.30:758,34,0	1/1:5,4:10:18.05:275,18,0	1/1:17,25:42:87.16:1320,87,0	1/1:2,4:6:12.04:200,12,0	1/1:1,11:12:33.10:527,33,0	1/1:6,9:15:33.08:497,33,0	0/0:14,0:14:36.12:0,36,458	0/0:11,0:11:30.10:0,30,382	1/1:4,5:9:17.98:267,18,0	1/1:1,10:11:30.10:501,30,0	0/0:9,0:9:14.87:0,15,103	0/0:25,0:25:62.58:0,63,456	0/0:20,0:20:50.63:0,51,369	0/0:15,0:15:27.08:0,27,333	0/0:25,0:25:39.17:0,39,656	0/0:6,0:6:11.97:0,12,119	0/0:11,0:11:24.06:0,24,281	0/0:8,0:8:15.04:0,15,179	0/0:6,0:6:12.04:0,12,153	1/1:1,10:11:30.10:500,30,0	1/1:4,11:15:39.12:602,39,0	0/0:24,0:24:60.19:0,60,764	1/1:8,4:12:14.98:218,15,0
chr10	54601624	.	CCT	C	67.56	PASS	AB=0.928;AC=13;AF=0.241;AN=54;BaseQRankSum=1.897;DP=763;FS=6.616;HRun=0;HaplotypeScore=130.0885;InbreedingCoeff=0.0881;MQ=46.96;MQ0=36;MQRankSum=3.029;QD=0.27;ReadPosRankSum=-1.892;VQSLOD=1.7209;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:42,3:45:39.47:0,39,921	0/1:11,0:11:0.51:1,0,281	0/0:50,0:16:21.07:0,21,304	0/1:71,1:21:11.75:12,0,220	0/0:34,0:30:5.66:0,6,50	0/0:31,0:27:8.60:0,9,49	0/0:23,1:23:18.31:0,18,152	0/0:39,0:35:28.45:0,28,227	0/1:24,0:23:12.68:13,0,18	0/0:30,0:25:10.85:0,11,111	1/1:22,0:16:2.84:9,3,0	0/0:24,0:24:63.18:0,63,928	0/1:19,2:21:33.79:34,0,646	./.	1/1:17,0:14:0.21:3,0,0	0/0:19,0:18:12.50:0,13,465	0/0:29,1:29:30.61:0,31,857	0/1:14,4:18:28.93:29,0,471	0/0:19,0:32:33:0,33,412	0/0:3,0:19:28.68:0,29,226	0/0:16,0:36:22.74:0,23,190	0/0:19,0:20:33.98:0,34,604	0/1:18,4:22:64.70:65,0,401	0/1:25,2:25:27.96:28,0,621	1/1:20,0:16:1.70:5,2,0	0/0:27,0:26:48.55:0,49,313	0/0:7,0:20:17:0,17,131	0/0:7,0:5:11.19:0,11,64
chr10	54602971	.	TAC	T	354.93	PASS	AB=0.937;AC=18;AF=0.346;AN=52;BaseQRankSum=1.241;DP=515;FS=7.433;HRun=0;HaplotypeScore=63.3736;InbreedingCoeff=-0.2422;MQ=68.51;MQ0=7;MQRankSum=0.065;QD=1.30;ReadPosRankSum=1.603;VQSLOD=0.3743;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:23,8:31:26.64:27,0,38	1/1:10,2:12:3.01:32,3,0	./.	./.	0/1:21,0:21:72.52:73,0,104	0/1:20,0:20:2.84:3,0,174	0/1:20,0:19:53.38:53,0,192	0/0:17,0:17:4.21:0,4,23	0/1:17,0:17:14.23:14,0,159	0/0:19,0:19:12.02:0,12,143	0/1:7,1:8:20.39:20,0,102	0/1:12,2:13:17.37:17,0,162	0/1:10,1:11:14.42:14,0,139	0/0:11,0:11:6:0,6,68	0/0:26,0:26:20.98:0,21,227	1/1:10,1:14:11.69:93,12,0	0/1:11,0:13:2.08:2,0,121	0/1:15,1:17:54.33:54,0,177	0/0:17,0:16:10.27:0,10,110	0/0:15,0:15:8.70:0,9,91	0/0:24,0:24:10.91:0,11,96	0/0:22,0:22:27.02:0,27,317	0/1:11,0:11:25.41:25,0,38	0/1:13,2:15:11.36:11,0,225	0/1:19,0:19:19.01:19,0,111	0/1:30,0:30:46.52:47,0,310	0/0:17,0:19:26.97:0,27,258	0/0:4,0:4:5.99:0,6,63
chr10	54603350	.	GT	G	10829.29	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=21.193;DP=775;FS=0.565;HRun=4;HaplotypeScore=115.2519;InbreedingCoeff=0.9999;MQ=87.30;MQ0=0;MQRankSum=-1.790;QD=32.33;ReadPosRankSum=2.230;VQSLOD=4.2377;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:61,0:61:99:0,168,2241	0/0:18,0:18:50.49:0,50,657	0/0:30,0:30:74.25:0,74,993	0/0:25,0:24:57.85:0,58,675	1/1:0,35:35:99:1216,105,0	1/1:0,21:21:57.17:684,57,0	1/1:1,29:30:78.24:936,78,0	1/1:4,27:31:81.20:928,81,0	1/1:0,29:29:69.21:828,69,0	1/1:0,41:41:99:1474,123,0	1/1:1,17:18:48.15:571,48,0	0/0:23,0:23:66.20:0,66,888	0/0:28,0:28:75.25:0,75,1047	1/1:0,31:31:84.26:1007,84,0	1/1:2,22:24:63.19:756,63,0	0/0:28,0:28:84.28:0,84,1176	0/0:16,0:16:48.13:0,48,636	0/0:18,0:18:54.12:0,54,715	0/0:23,0:23:60.19:0,60,823	0/0:25,0:25:72.23:0,72,992	0/0:41,0:41:99:0,117,1622	0/0:39,0:39:99:0,114,1511	0/0:19,0:19:57.17:0,57,761	0/0:21,0:21:54.17:0,54,739	1/1:1,24:25:60.18:715,60,0	1/1:1,40:41:99:1390,120,0	0/0:25,0:25:72.23:0,72,990	1/1:0,9:9:27.08:324,27,0
chr10	54604413	.	TACCC	T	1403.42	PASS	AB=0.914;AC=12;AF=0.214;AN=56;BaseQRankSum=14.978;DP=611;FS=7.478;HRun=0;HaplotypeScore=195.6137;InbreedingCoeff=-0.2727;MQ=60.49;MQ0=0;MQRankSum=-14.145;QD=6.32;ReadPosRankSum=5.643;VQSLOD=1.3318;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,129,3166	0/0:12,0:12:36.12:0,36,993	0/0:24,0:23:53.24:0,53,1254	0/0:23,0:19:47.87:0,48,985	0/1:12,7:19:99:202,0,320	0/1:12,1:13:99:123,0,251	0/1:15,2:17:99:160,0,537	0/1:31,0:31:99:110,0,813	0/1:22,0:22:62.84:63,0,416	0/1:19,1:20:74.82:75,0,334	0/1:11,3:14:99:179,0,236	0/0:25,0:25:74.85:0,75,1889	0/0:25,0:25:75.21:0,75,1874	0/1:11,1:12:51.56:52,0,395	0/1:15,1:16:86.30:86,0,248	0/0:22,0:22:66.21:0,66,1709	0/0:19,0:19:57.13:0,57,1443	0/0:23,0:23:48.20:0,48,1763	0/0:24,0:24:72.23:0,72,1797	0/0:20,0:20:57.18:0,57,1544	0/0:32,0:32:96.26:0,96,2368	0/0:21,0:21:63.14:0,63,1478	0/0:22,0:22:66.16:0,66,1586	0/0:31,0:31:93.29:0,93,2436	0/1:11,1:12:99:126,0,275	0/1:24,3:27:99:253,0,629	0/0:21,0:21:63.22:0,63,1803	0/1:18,1:19:99:127,0,151
chr10	54604414	.	ACCCTCCCTCCTTCCTG	A	14590.63	PASS	AB=0.788;AC=22;AF=0.393;AN=56;BaseQRankSum=15.212;DP=615;FS=7.808;HRun=0;HaplotypeScore=312.1596;InbreedingCoeff=0.8491;MQ=60.11;MQ0=0;MQRankSum=-13.635;QD=63.99;ReadPosRankSum=-0.108;VQSLOD=3.0962;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,108,6281	0/0:13,0:13:36.12:0,36,2417	0/0:26,0:24:35.77:0,36,1145	0/0:24,0:20:21.43:0,21,773	1/1:15,6:21:48.05:1219,48,0	1/1:7,7:14:36.06:1195,36,0	0/1:15,3:18:31.72:623,0,32	1/1:16,15:31:41.69:605,42,0	1/1:9,12:21:48.59:1887,49,0	1/1:11,9:20:48.07:1715,48,0	1/1:11,5:16:36.12:1161,36,0	0/0:25,0:25:63.22:0,63,3857	0/0:23,0:23:57.20:0,57,3491	1/1:9,3:12:27.02:843,27,0	1/1:8,8:16:36.05:1318,36,0	0/0:22,0:22:51.16:0,51,3176	0/0:18,0:18:45.15:0,45,3051	0/0:23,0:23:60.21:0,60,3729	0/0:23,0:23:47.99:0,48,2447	0/0:20,0:20:43.37:0,43,3085	0/0:33,0:33:81.25:0,81,4514	0/0:19,0:19:45.15:0,45,2904	0/0:23,0:23:57.20:0,57,3501	0/0:31,0:31:84.24:0,84,4870	1/1:8,4:12:24.08:885,24,0	0/1:17,11:28:99:1998,0,151	0/0:21,0:21:60.16:0,60,3846	1/1:5,14:19:27.09:1144,27,0
chr10	54604475	.	TCTACTCGACCTTCTTCCCTCCTTC	T	18835.46	PASS	AB=0.619;AC=23;AF=0.411;AN=56;BaseQRankSum=15.757;DP=619;FS=26.585;HRun=0;HaplotypeScore=411.5004;InbreedingCoeff=0.8984;MQ=65.20;MQ0=3;MQRankSum=-13.402;QD=75.04;ReadPosRankSum=5.660;VQSLOD=2.8616;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:99:0,99,8477	0/0:7,0:7:21.07:0,21,1609	0/0:29,0:26:75.26:0,75,4599	0/0:26,0:23:60.17:0,60,3412	1/1:5,20:25:54.03:2468,54,0	1/1:3,12:15:18.06:1160,18,0	1/1:12,21:33:27.09:1720,27,0	1/1:18,0:18:6.02:130,6,0	1/1:6,21:27:30.10:1944,30,0	1/1:7,19:26:50.84:1975,51,0	1/1:6,11:17:30.06:1663,30,0	0/0:25,0:25:72.23:0,72,6782	0/0:15,0:15:45.15:0,45,3759	1/1:3,23:26:30.10:1975,30,0	1/1:5,19:24:36.12:2321,36,0	0/0:19,0:19:57.20:0,57,4744	0/0:27,0:27:78.22:0,78,7790	0/0:20,0:20:57.20:0,57,5163	0/0:14,0:14:39.13:0,39,2895	0/0:19,0:19:54.15:0,54,4218	0/0:24,0:24:69.24:0,69,6357	0/0:15,0:15:45.14:0,45,3063	0/0:19,0:19:57.18:0,57,4927	0/0:47,0:47:99:0,138,11885	1/1:4,5:9:15.05:988,15,0	0/1:10,16:26:99:1910,0,187	0/0:29,0:29:84.29:0,84,7193	1/1:2,3:5:9.03:581,9,0
chr10	54605545	.	C	CA	12302.16	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-14.006;DP=741;FS=0.574;HRun=1;HaplotypeScore=72.1371;InbreedingCoeff=0.9987;MQ=81.60;MQ0=0;MQRankSum=0.627;QD=38.56;ReadPosRankSum=0.899;VQSLOD=5.4095;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,162,2021	0/0:9,0:9:27.09:0,27,349	0/0:17,0:17:51.16:0,51,652	0/0:21,0:21:60.12:0,60,722	1/1:5,23:28:60.85:896,61,0	1/1:2,23:25:66.22:989,66,0	1/1:1,22:23:60.20:899,60,0	1/1:4,32:36:93.26:1313,93,0	1/1:0,21:21:57.19:854,57,0	1/1:2,33:35:96.26:1373,96,0	1/1:0,15:15:33.11:494,33,0	0/0:19,0:19:51.17:0,51,662	0/0:26,0:26:72.22:0,72,919	1/1:0,22:22:60.20:899,60,0	1/1:0,32:32:84.28:1258,84,0	0/0:21,1:22:18.25:0,18,734	0/0:28,0:28:84.27:0,84,1089	0/0:19,0:19:45.15:0,45,584	0/0:28,0:28:78.19:0,78,989	0/0:24,0:24:66.20:0,66,842	0/0:39,0:39:99:0,111,1426	0/0:26,0:26:72.22:0,72,920	0/0:22,0:22:57.13:0,57,693	0/0:43,0:43:99:0,126,1635	1/1:1,28:28:75.25:1117,75,0	1/1:1,32:33:96.30:1399,96,0	0/0:25,0:25:75.22:0,75,945	1/1:0,20:20:54.18:809,54,0
chr10	54606208	.	TGCGCGCGC	T	2526.64	PASS	AB=1.000;AC=24;AF=0.444;AN=54;BaseQRankSum=5.502;DP=499;FS=10.877;HRun=0;HaplotypeScore=131.2599;InbreedingCoeff=0.6520;MQ=88.05;MQ0=15;MQRankSum=-1.032;QD=11.64;ReadPosRankSum=-0.274;VQSLOD=1.7653;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:75.26:0,75,2201	0/0:5,0:5:3.01:0,3,79	0/1:24,0:20:4.78:49,0,5	0/1:31,0:24:44.21:44,0,89	./.	1/1:2,11:14:2.55:48,3,0	1/1:7,11:18:3.01:71,3,0	1/1:6,9:13:24.07:566,24,0	1/1:5,9:12:2.85:70,3,0	1/1:4,10:12:27.07:575,27,0	1/1:3,12:15:2.62:69,3,0	0/0:21,0:20:45.14:0,45,1180	0/0:9,0:9:12.04:0,12,360	1/1:4,6:11:2.94:49,3,0	1/1:6,1:17:5.89:37,6,0	0/0:5,0:5:15.05:0,15,429	0/0:35,0:34:93.29:0,93,2500	0/0:29,0:27:51.17:0,51,1240	0/0:14,0:14:24.06:0,24,600	0/0:12,0:12:15.01:0,15,273	0/0:19,0:18:24.07:0,24,649	0/0:12,0:12:18.06:0,18,484	0/0:19,0:19:30.10:0,30,938	0/0:33,0:32:72.20:0,72,2349	1/1:21,0:20:2.84:68,3,0	1/1:3,11:14:33.11:836,33,0	0/0:15,0:15:15.03:0,15,414	1/1:9,0:8:15:233,15,0
chr10	54606214	.	C	CGT	760.81	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=0.287;DP=473;FS=0.000;HRun=0;HaplotypeScore=98.2770;InbreedingCoeff=0.5578;MQ=77.44;MQ0=24;MQRankSum=1.568;QD=8.09;ReadPosRankSum=-2.709;VQSLOD=2.7185;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:42:84.24:0,84,1054	0/0:6,0:6:5.31:0,5,63	0/1:15,0:11:5.87:6,0,8	0/0:22,0:15:1.04:0,1,20	0/0:8,0:7:2.97:0,3,20	0/1:15,0:14:0:1,0,0	0/0:15,0:15:11.33:0,11,79	0/0:12,0:10:29.28:0,29,187	0/0:13,0:11:2.77:0,3,22	0/0:15,0:12:8.49:0,8,158	0/0:13,0:13:2.77:0,3,23	0/0:22,0:20:50.87:0,51,531	0/0:13,0:12:29.81:0,30,258	0/1:9,0:9:11.87:12,0,13	0/0:15,0:15:5.77:0,6,39	0/0:8,0:8:18.02:0,18,234	0/0:43,0:40:99:0,105,1257	0/0:32,0:30:56.63:0,57,657	1/1:12,4:16:25.95:342,26,0	1/1:5,5:11:17.96:160,18,0	1/1:15,0:13:7.86:219,8,0	0/0:10,0:10:17.96:0,18,192	0/0:15,0:16:38.95:0,39,458	0/0:31,0:29:73.69:0,74,955	0/0:18,0:17:8.97:0,9,71	0/0:16,0:16:10.34:0,10,191	1/1:10,3:12:17.98:174,18,0	0/0:8,0:7:20.83:0,21,158
chr10	54606217	.	GCGCGCGCGCA	G	2284.30	PASS	AB=0.951;AC=17;AF=0.304;AN=56;BaseQRankSum=5.618;DP=489;FS=13.543;HRun=0;HaplotypeScore=137.7486;InbreedingCoeff=0.1560;MQ=72.93;MQ0=26;MQRankSum=-0.463;QD=11.48;ReadPosRankSum=1.795;VQSLOD=1.8130;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:43:70.21:0,70,2408	0/0:7,0:7:7.43:0,7,147	0/1:14,0:10:6.59:48,0,7	0/1:19,0:12:43.71:44,0,90	0/0:8,0:7:3.48:0,3,56	1/1:15,1:15:1.66:4,2,0	0/1:20,0:19:34.88:65,0,35	1/1:14,0:12:23.99:566,24,0	0/1:14,0:12:37.66:64,0,38	0/1:16,0:13:16.30:522,0,16	1/1:15,0:15:2.58:68,3,0	0/0:22,0:20:48.13:0,48,1328	0/0:12,0:11:21.07:0,21,743	0/1:11,0:11:4.05:4,0,81	0/1:16,0:16:22.22:22,0,40	0/0:10,0:10:21.05:0,21,556	0/0:43,0:40:99:0,117,3206	0/0:33,0:31:52.42:0,52,1292	0/0:14,0:14:28.72:0,29,642	0/0:11,0:11:15.01:0,15,274	0/0:15,0:13:24.07:0,24,709	0/0:10,0:10:21.07:0,21,563	0/0:15,0:14:36.12:0,36,1257	0/0:32,0:30:78.22:0,78,2808	0/1:4,15:17:35.80:94,0,36	0/1:19,0:19:99:715,0,127	0/0:14,0:13:15.97:0,16,444	1/1:6,0:5:15:233,15,0
chr10	54606225	.	GCA	G	554.34	PASS	AB=0.982;AC=16;AF=0.320;AN=50;BaseQRankSum=1.125;DP=502;FS=11.596;HRun=0;HaplotypeScore=95.9194;InbreedingCoeff=0.3804;MQ=60.96;MQ0=29;MQRankSum=2.595;QD=2.53;ReadPosRankSum=1.582;VQSLOD=1.2954;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:43,0:43:20.12:134,20,0	1/1:7,0:7:2.34:20,2,0	./.	./.	0/0:11,0:10:5.96:0,6,45	0/0:19,0:17:5.99:0,6,49	0/0:23,0:22:14.97:0,15,121	0/0:20,0:18:9.34:0,9,46	0/0:15,0:13:5.72:0,6,50	0/1:19,0:16:12.79:13,0,62	0/0:17,0:17:3:0,3,25	0/0:18,0:16:12.01:0,12,131	0/0:12,0:11:11.57:0,12,71	0/0:14,0:14:12.45:0,12,100	0/0:17,0:17:6.48:0,6,35	1/1:7,1:9:8.65:48,9,0	1/1:41,4:41:39.23:389,39,0	1/1:18,13:28:7.66:73,8,0	0/0:12,0:12:8.93:0,9,41	1/1:9,0:9:0.46:1,0,0	0/1:20,0:18:3.91:4,0,34	0/0:10,0:10:2.02:0,2,60	0/0:14,0:13:12.46:0,12,134	0/0:29,3:30:4.15:0,4,345	0/1:22,0:20:11.46:11,0,41	0/0:26,0:26:47.42:0,47,271	0/1:12,0:12:14.27:14,0,20	./.
chr10	54608498	.	CGTCT	C	14025.82	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=19.888;DP=704;FS=2.035;HRun=0;HaplotypeScore=153.8962;InbreedingCoeff=0.9844;MQ=80.18;MQ0=0;MQRankSum=-19.382;QD=57.96;ReadPosRankSum=-2.909;VQSLOD=5.6165;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,159,4422	0/0:15,0:15:45.15:0,45,1298	0/0:25,0:25:75.17:0,75,1783	0/0:19,0:19:57.17:0,57,1395	1/1:0,15:15:38.96:720,39,0	1/1:0,20:20:60.21:1255,60,0	1/1:0,23:23:60.16:1212,60,0	1/1:0,24:24:72.23:1435,72,0	1/1:0,25:25:69.24:1437,69,0	1/1:0,16:16:48.16:1000,48,0	1/1:0,17:16:42.14:878,42,0	0/0:35,0:35:99:0,105,3026	0/0:29,0:29:87.27:0,87,2346	1/1:0,31:31:87.30:1820,87,0	1/1:0,26:26:75.26:1562,75,0	0/0:22,1:23:6.46:0,6,1849	0/0:34,0:34:99:0,102,2915	0/0:20,0:20:57.20:0,57,1651	0/0:33,0:33:96.33:0,96,2554	0/0:19,0:19:57.20:0,57,1625	0/0:40,0:40:99:0,120,3471	0/0:27,0:27:81.25:0,81,2202	0/0:15,0:15:45.14:0,45,1204	0/0:38,0:38:99:0,114,3274	1/1:0,19:19:57.15:1141,57,0	1/1:0,20:20:60.21:1256,60,0	0/0:36,0:36:99:0,108,3105	1/1:0,6:6:15.05:309,15,0
chr10	54608999	.	AAG	A	480.05	PASS	AB=0.933;AC=16;AF=0.296;AN=54;BaseQRankSum=-0.714;DP=442;FS=0.000;HRun=0;HaplotypeScore=78.3830;InbreedingCoeff=0.3403;MQ=49.26;MQ0=28;MQRankSum=3.827;QD=2.77;ReadPosRankSum=1.168;VQSLOD=1.7410;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:24,1:24:27.01:277,27,0	0/1:9,0:9:29.16:92,0,29	0/0:28,0:8:9.02:0,9,100	0/0:33,0:8:12.04:0,12,152	0/0:13,0:13:8.70:0,9,72	0/0:20,0:18:10.63:0,11,72	0/0:22,0:21:17.56:0,18,102	0/0:23,0:22:23.94:0,24,209	0/0:14,0:14:17.62:0,18,81	0/0:19,0:17:8.51:0,9,39	0/0:6,0:5:2.22:0,2,7	0/0:9,0:9:3.01:0,3,37	0/0:5,0:4:5.99:0,6,68	0/0:17,0:17:10.98:0,11,82	0/1:14,0:14:20.84:21,0,73	0/1:11,7:17:11.54:29,0,12	1/1:8,7:15:3:28,3,0	1/1:12,4:15:3.01:35,3,0	0/0:11,0:9:0.98:0,1,15	1/1:16,0:15:11.17:61,11,0	0/1:8,0:8:0:0,0,0	0/0:12,0:11:8.98:0,9,110	0/1:12,2:14:13.54:14,0,195	0/0:19,0:17:9.02:0,9,107	0/0:13,0:12:11.52:0,12,70	0/1:21,0:18:1.45:1,0,70	1/1:15,0:16:16.73:80,17,0	./.
chr10	54609024	.	AG	A	1346.37	PASS	AB=0.822;AC=27;AF=0.482;AN=56;BaseQRankSum=3.738;DP=358;FS=7.957;HRun=2;HaplotypeScore=61.0791;InbreedingCoeff=0.1840;MQ=36.34;MQ0=49;MQRankSum=3.099;QD=5.93;ReadPosRankSum=-0.730;VQSLOD=-0.0477;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:14:12.32:0,12,40	0/0:9,0:9:0.52:0,1,42	0/0:20,0:3:9.03:0,9,119	0/0:26,1:5:12.04:0,12,156	1/1:6,3:9:3.29:66,3,0	0/1:15,4:16:7.18:294,0,7	0/1:4,5:8:10.07:102,0,10	0/1:16,1:11:22.75:23,0,74	1/1:5,5:10:20.74:185,21,0	0/1:9,3:8:2.76:161,0,3	0/1:3,4:6:0.18:27,0,0	0/0:5,0:4:2.97:0,3,21	0/0:6,0:5:8.24:0,8,116	1/1:3,7:10:5.41:124,5,0	0/1:4,6:9:3.87:43,0,4	0/1:8,1:8:0.43:15,0,0	0/1:13,0:12:1.18:1,0,16	0/0:13,0:10:13.72:0,14,114	0/1:15,1:12:56.65:57,0,166	1/1:11,3:10:9.52:37,10,0	1/1:8,2:9:1.82:5,2,0	0/0:11,0:9:9.49:0,9,111	0/0:19,0:15:12.17:0,12,189	0/1:15,2:14:28.71:29,0,51	1/1:5,4:8:14.26:116,14,0	0/1:12,3:12:42.43:114,0,42	1/1:7,4:10:17.62:88,18,0	1/1:9,1:3:3:26,3,0
chr10	54609030	.	GAGA	G	1042.84	PASS	AB=0.806;AC=19;AF=0.339;AN=56;BaseQRankSum=1.713;DP=358;FS=7.309;HRun=0;HaplotypeScore=69.7473;InbreedingCoeff=0.2240;MQ=33.31;MQ0=57;MQRankSum=-1.121;QD=6.86;ReadPosRankSum=0.241;VQSLOD=1.4807;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:14:20.83:0,21,293	0/0:9,0:9:19.31:0,19,349	0/0:19,0:3:9.03:0,9,114	0/0:25,0:5:12.04:0,12,146	0/1:6,2:8:0.23:27,0,0	0/1:18,1:18:15.78:263,0,16	0/1:9,1:12:59.94:119,0,60	0/1:14,0:9:38.37:53,0,38	1/1:4,1:9:8.24:130,8,0	0/1:8,3:8:36.46:159,0,36	1/1:6,2:7:2.77:32,3,0	0/0:5,0:4:3.01:0,3,54	0/0:5,0:5:7.74:0,8,125	1/1:4,3:7:5.19:59,5,0	0/1:5,2:9:29.92:47,0,30	0/0:5,0:4:3.01:0,3,36	0/0:12,0:10:5.98:0,6,86	0/0:12,0:9:11.93:0,12,184	0/0:16,0:12:33.11:0,33,525	0/0:14,0:10:9.50:0,10,129	1/1:11,0:9:1.78:5,2,0	0/0:13,0:10:4.90:0,5,76	0/0:19,0:15:20.97:0,21,301	0/0:17,0:13:2.88:0,3,38	1/1:6,2:8:5.62:57,6,0	0/1:13,2:11:53.07:181,0,53	0/0:12,0:11:21.44:0,21,235	1/1:9,1:4:6.02:74,6,0
chr10	54609032	.	GA	G	637.91	PASS	AB=0.942;AC=17;AF=0.304;AN=56;BaseQRankSum=3.365;DP=358;FS=4.562;HRun=1;HaplotypeScore=69.7519;InbreedingCoeff=0.0633;MQ=32.71;MQ0=59;MQRankSum=-0.538;QD=4.04;ReadPosRankSum=-0.783;VQSLOD=0.1559;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:15:18.55:0,19,249	0/0:9,0:9:19.61:0,20,260	0/0:18,0:3:9.02:0,9,103	0/0:20,0:5:12.02:0,12,137	0/1:7,1:8:13.35:13,0,30	0/1:20,1:18:7.62:180,0,8	0/1:12,2:12:61.97:76,0,62	0/1:14,1:9:35.44:35,0,131	1/1:9,0:9:6.72:75,7,0	0/1:13,0:9:49.69:136,0,50	1/1:10,0:7:2.41:21,2,0	0/0:5,0:4:3.01:0,3,45	0/0:7,0:7:8.46:0,8,93	0/1:7,0:6:17.18:27,0,17	0/1:10,1:10:24.56:25,0,47	0/0:5,0:4:2.90:0,3,16	0/0:11,0:9:5.75:0,6,60	0/0:11,0:8:14.95:0,15,162	0/0:14,0:12:30.10:0,30,418	0/0:15,0:11:9.50:0,9,133	1/1:13,0:10:1.75:5,2,0	0/0:12,0:9:4.90:0,5,51	0/0:19,0:15:20.67:0,21,238	0/0:17,0:12:2.93:0,3,38	0/1:9,1:8:2.81:27,0,3	0/1:15,0:11:83.48:109,0,83	0/0:12,0:11:18.49:0,18,214	1/1:12,0:4:6.01:64,6,0
chr10	54610389	.	AG	A	11222.34	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=13.380;DP=633;FS=14.698;HRun=1;HaplotypeScore=62.9475;InbreedingCoeff=0.9996;MQ=90.29;MQ0=0;MQRankSum=-3.824;QD=39.24;ReadPosRankSum=0.401;VQSLOD=3.7844;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:99:0,99,1543	0/0:8,0:8:24.06:0,24,359	0/0:30,0:30:90.29:0,90,1393	0/0:19,0:19:32.36:0,32,749	1/1:0,27:27:78.26:1090,78,0	1/1:0,23:23:66.22:923,66,0	1/1:0,23:23:57.19:797,57,0	1/1:0,33:33:96.32:1339,96,0	1/1:0,21:21:57.19:797,57,0	1/1:0,29:29:87.28:1199,87,0	1/1:0,19:19:54.18:755,54,0	0/0:15,0:15:45.15:0,45,718	0/0:28,0:28:84.29:0,84,1333	1/1:0,13:13:36.12:503,36,0	1/1:0,27:27:72.24:1007,72,0	0/0:24,1:25:33.29:0,33,1108	0/0:27,0:27:81.28:0,81,1292	0/0:16,0:16:42.14:0,42,671	0/0:21,0:21:63.17:0,63,978	0/0:23,0:23:69.24:0,69,1103	0/0:24,0:24:72.25:0,72,1149	0/0:15,0:15:45.14:0,45,697	0/0:19,0:19:57.19:0,57,911	0/0:21,0:21:63.21:0,63,1004	1/1:0,16:16:45.15:629,45,0	1/1:0,28:28:84.28:1175,84,0	0/0:23,0:23:69.24:0,69,1103	1/1:0,27:27:72.24:1007,72,0
chr10	54610565	.	C	CT	6234.77	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-14.049;DP=584;FS=1.945;HRun=9;HaplotypeScore=56.0068;InbreedingCoeff=0.9923;MQ=71.96;MQ0=3;MQRankSum=-0.910;QD=23.98;ReadPosRankSum=0.653;VQSLOD=5.6763;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:77.94:0,78,669	0/0:10,0:10:29.99:0,30,260	0/0:22,0:20:41.01:0,41,341	0/0:20,0:17:38.06:0,38,328	1/1:1,20:21:54.15:597,54,0	1/1:3,23:26:60.16:664,60,0	1/1:2,10:13:35.93:379,36,0	1/1:6,22:28:54.39:617,54,0	1/1:2,19:20:48.13:529,48,0	1/1:8,20:27:28.19:528,28,0	1/1:2,15:17:42.11:465,42,0	0/0:16,0:16:47.98:0,48,413	0/0:25,0:25:65.96:0,66,569	1/1:1,10:11:27.07:298,27,0	1/1:7,16:23:48.13:529,48,0	0/0:9,0:9:26.99:0,27,234	0/0:20,0:20:53.98:0,54,469	0/0:18,0:18:44.96:0,45,384	0/0:29,0:29:62.96:0,63,542	0/0:32,0:32:80.97:0,81,702	0/0:15,0:15:44.99:0,45,391	0/0:16,0:16:41.97:0,42,363	0/0:15,0:15:41.98:0,42,362	0/0:19,0:19:56.95:0,57,487	1/1:3,8:11:21.06:232,21,0	1/1:3,33:36:96.26:1060,96,0	0/0:27,0:29:79.05:0,79,660	1/1:13,12:25:10.04:339,10,0
chr10	54610702	.	GT	G	9590.92	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=12.311;DP=577;FS=2.254;HRun=2;HaplotypeScore=59.4192;InbreedingCoeff=0.9995;MQ=71.66;MQ0=0;MQRankSum=-0.598;QD=38.67;ReadPosRankSum=1.059;VQSLOD=5.4417;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:81.25:0,81,1253	0/0:8,0:8:24.08:0,24,384	0/0:13,0:13:39.07:0,39,529	0/0:16,0:16:36.12:0,36,523	1/1:1,31:32:84.23:1136,84,0	1/1:0,18:18:54.18:739,54,0	1/1:0,27:27:66.22:919,66,0	1/1:0,26:26:72.21:959,72,0	1/1:0,17:17:48.16:666,48,0	1/1:1,24:25:75.19:1006,75,0	1/1:0,17:17:51.17:713,51,0	0/0:12,0:12:30.10:0,30,479	0/0:19,0:19:57.19:0,57,904	1/1:0,15:15:45.15:624,45,0	1/1:0,18:18:51.17:713,51,0	0/0:19,0:19:57.19:0,57,910	0/0:24,0:24:72.23:0,72,1127	0/0:23,0:23:62.97:0,63,958	0/0:27,0:27:78.21:0,78,1184	0/0:27,0:27:81.28:0,81,1290	0/0:34,0:34:99:0,102,1615	0/0:12,0:12:36.12:0,36,575	0/0:11,0:11:33.10:0,33,500	0/0:23,0:23:69.23:0,69,1095	1/1:0,11:11:33.11:461,33,0	1/1:0,23:23:69.20:942,69,0	0/0:32,0:32:93.30:0,93,1452	1/1:0,19:19:51.17:713,51,0
chr10	54610771	.	A	AT	3972.82	PASS	AB=0.870;AC=26;AF=0.464;AN=56;BaseQRankSum=-1.616;DP=535;FS=0.000;HRun=12;HaplotypeScore=71.6168;InbreedingCoeff=0.7441;MQ=67.23;MQ0=7;MQRankSum=-1.279;QD=13.20;ReadPosRankSum=0.383;VQSLOD=3.8046;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,1:22:30.48:0,30,387	0/0:10,0:10:29.80:0,30,216	0/1:15,0:11:8.19:43,0,8	0/0:9,0:9:5.84:0,6,41	1/1:7,15:22:37.49:441,37,0	1/1:6,11:18:44.70:406,45,0	1/1:9,7:16:17.14:230,17,0	1/1:15,13:30:24.97:333,25,0	1/1:8,7:13:27.01:247,27,0	1/1:17,13:31:16.06:455,16,0	1/1:7,11:18:33.08:319,33,0	0/0:12,0:11:17.87:0,18,131	0/0:13,0:13:26.82:0,27,197	1/1:11,5:16:26.10:261,26,0	1/1:10,9:19:11.13:264,11,0	0/0:15,0:16:35.72:0,36,262	0/0:32,0:34:73.39:0,73,531	0/0:22,0:22:46.72:0,47,333	0/0:18,0:17:29.76:0,30,215	0/1:19,2:21:3.71:4,0,205	0/1:11,1:12:12.41:12,0,108	0/0:14,0:14:8.60:0,9,194	0/0:21,0:21:53.66:0,54,392	0/0:15,0:16:34.82:0,35,247	1/1:12,11:23:24.19:360,24,0	0/1:11,13:25:1.35:364,0,1	0/0:23,0:23:50.65:0,51,370	1/1:6,7:13:26.72:233,27,0
chr10	54616308	.	CAGCCAGGTAGCT	C	35813.94	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=15.677;DP=609;FS=4.816;HRun=0;HaplotypeScore=265.8039;InbreedingCoeff=0.9902;MQ=82.27;MQ0=0;MQRankSum=-16.623;QD=80.12;ReadPosRankSum=6.038;VQSLOD=4.2633;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,23:30:51.13:1763,51,0	1/1:3,10:13:21.07:798,21,0	0/0:31,0:32:90.17:0,90,4368	0/0:23,0:23:69.24:0,69,3451	1/1:2,22:24:57.20:2164,57,0	1/1:4,9:13:24.08:861,24,0	1/1:3,16:19:48.16:1742,48,0	1/1:6,15:21:45.05:1285,45,0	1/1:3,24:27:63.22:2393,63,0	1/1:3,20:23:60.16:1873,60,0	1/1:3,28:31:72.25:2691,72,0	1/1:3,15:18:42.14:1595,42,0	1/1:5,22:27:66.23:2468,66,0	1/1:2,19:21:48.16:1746,48,0	1/1:5,23:28:60.21:2198,60,0	1/1:3,20:23:57.20:2049,57,0	1/1:6,10:16:18.06:684,18,0	1/1:0,8:8:21.07:759,21,0	0/0:21,0:21:60.21:0,60,3130	0/0:30,0:30:90.31:0,90,5292	0/0:23,0:23:69.24:0,69,4168	1/1:1,20:21:57.20:2079,57,0	1/1:2,15:17:33.11:1212,33,0	1/1:3,8:11:12.47:457,12,0	1/1:3,10:13:27.09:1025,27,0	1/1:4,29:33:87.24:2948,87,0	0/0:33,0:33:96.31:0,96,5579	1/1:0,10:10:27.09:1025,27,0
chr10	54617299	.	A	AT	18122.31	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-7.833;DP=731;FS=21.599;HRun=1;HaplotypeScore=76.0982;InbreedingCoeff=0.9999;MQ=86.20;MQ0=1;MQRankSum=-4.437;QD=41.00;ReadPosRankSum=0.204;VQSLOD=2.8252;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,144,1868	1/1:0,12:12:30.06:422,30,0	0/0:26,0:26:57.60:0,58,910	0/0:28,0:28:51.38:0,51,903	1/1:1,22:23:66.16:956,66,0	1/1:2,28:30:84.28:1259,84,0	1/1:0,21:21:60.20:899,60,0	1/1:1,27:28:78.25:1147,78,0	1/1:0,24:24:69.23:1034,69,0	1/1:0,27:27:72.23:1056,72,0	1/1:2,24:26:66.08:909,66,0	1/1:0,28:28:81.27:1214,81,0	1/1:0,26:26:69.23:1034,69,0	1/1:0,17:17:48.16:719,48,0	1/1:0,25:25:69.23:1034,69,0	1/1:2,23:25:66.22:984,66,0	0/0:40,0:39:99:0,120,1540	0/0:20,0:20:60.17:0,60,763	0/0:25,0:25:72.21:0,72,916	0/0:30,0:30:84.27:0,84,1091	0/0:46,0:45:99:0,126,1602	1/1:0,18:18:51.17:764,51,0	1/1:0,21:21:56.83:853,57,0	1/1:1,23:24:66.16:962,66,0	1/1:0,21:21:60.20:892,60,0	1/1:1,34:35:99:1489,102,0	0/0:25,0:25:69.22:0,69,892	1/1:0,11:11:33.11:494,33,0
chr10	54617654	.	T	TTACACAC	8828.37	PASS	AB=0.638;AC=23;AF=0.411;AN=56;BaseQRankSum=15.530;DP=825;FS=1.759;HRun=0;HaplotypeScore=260.0978;InbreedingCoeff=-0.5526;MQ=52.11;MQ0=8;MQRankSum=-6.569;QD=13.40;ReadPosRankSum=8.126;VQSLOD=3.1683;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:19,0:54:99:379,0,322	1/1:3,0:12:14.64:258,15,0	0/0:28,0:13:36.78:0,37,679	0/0:37,0:24:65.36:0,65,1105	0/1:8,0:20:99:175,0,202	0/1:14,0:29:99:326,0,164	0/1:10,0:25:89.59:267,0,90	0/1:41,0:40:99:931,0,676	0/1:8,0:26:99:694,0,143	0/1:18,0:38:99:1324,0,261	0/1:12,1:35:99:254,0,128	0/1:10,0:41:99:310,0,155	0/1:11,0:45:90.82:423,0,91	0/1:12,0:23:99:218,0,131	0/1:9,0:23:55.40:289,0,55	0/1:11,0:35:99:689,0,165	0/1:11,0:25:99:132,0,177	0/1:8,0:27:99:159,0,221	0/0:20,0:19:51.12:0,51,922	0/0:15,0:15:42.10:0,42,861	0/0:47,0:47:99:0,138,3576	0/1:7,0:25:99:117,0,146	0/1:9,0:30:99:194,0,174	0/1:8,0:35:78.94:315,0,79	0/1:14,0:23:99:223,0,169	0/1:17,0:32:99:992,0,226	0/0:17,0:18:54.18:0,54,1306	0/1:5,0:10:98.53:162,0,99
chr10	54617826	.	CACACACACAA	C	4255.83	PASS	AB=0.993;AC=27;AF=0.482;AN=56;BaseQRankSum=-4.521;DP=785;FS=7.232;HRun=0;HaplotypeScore=241.4710;InbreedingCoeff=-0.0933;MQ=52.74;MQ0=22;MQRankSum=-1.824;QD=7.81;ReadPosRankSum=-6.990;VQSLOD=0.3122;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:38,0:38:63.98:64,0,1636	0/1:13,0:13:81.87:90,0,82	0/0:42,0:16:23.08:0,23,637	0/0:56,0:21:27.12:0,27,398	1/1:21,1:22:10.91:170,11,0	0/1:13,1:14:7.74:337,0,8	1/1:22,1:23:11.87:200,12,0	0/1:30,0:28:54.15:405,0,54	1/1:12,0:12:9.03:107,9,0	0/1:31,0:30:99:205,0,126	0/1:19,0:19:25.33:25,0,56	0/0:33,0:32:37.07:0,37,841	0/1:36,0:36:59.53:60,0,1427	0/1:32,0:31:8.74:370,0,9	0/1:22,1:23:29.48:293,0,29	0/0:21,0:21:28.84:0,29,157	0/0:23,0:23:35.02:0,35,1421	0/1:32,0:32:75.60:76,0,1793	0/1:20,0:20:78.38:134,0,78	0/1:21,0:21:15.95:28,0,16	0/1:63,0:58:90.07:402,0,90	0/1:27,0:26:99:135,0,477	0/0:20,0:20:10.48:0,10,545	0/0:44,0:43:17.32:0,17,884	1/1:22,0:22:11.89:125,12,0	1/1:30,1:30:64.52:715,65,0	0/1:27,0:27:36.42:162,0,36	1/1:9,0:9:7.23:154,7,0
chr10	54617828	.	CACACACAA	C	7859	PASS	AB=1.000;AC=41;AF=0.732;AN=56;BaseQRankSum=-5.104;DP=783;FS=3.874;HRun=0;HaplotypeScore=209.6139;InbreedingCoeff=0.4443;MQ=53.69;MQ0=22;MQRankSum=-2.409;QD=13.48;ReadPosRankSum=-4.861;VQSLOD=3.0231;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:37,0:37:89.85:90,0,1240	1/1:11,2:13:19.57:317,20,0	0/0:43,0:18:22.26:0,22,607	0/0:58,0:22:31.76:0,32,366	1/1:6,16:22:16.50:426,17,0	1/1:10,5:15:35.99:656,36,0	1/1:5,17:22:11.53:303,12,0	1/1:30,0:28:54.88:561,55,0	1/1:1,10:11:9.03:244,9,0	1/1:29,0:29:0.95:420,1,0	1/1:18,1:19:5.69:104,6,0	0/0:32,0:31:35.84:0,36,506	0/1:36,0:36:73.95:74,0,834	1/1:8,22:29:30.10:740,30,0	1/1:19,3:23:30.50:477,30,0	1/1:21,0:21:7.32:157,7,0	0/1:23,0:23:12.89:13,0,1013	0/1:33,0:33:99:100,0,1309	1/1:20,0:20:47.34:344,47,0	1/1:20,2:22:8.04:110,8,0	1/1:61,1:57:34.15:622,34,0	0/1:27,0:26:99:183,0,240	0/0:19,0:19:7.05:0,7,294	0/0:48,0:46:18.96:0,19,555	1/1:4,18:22:11.56:263,12,0	1/1:23,7:29:74.93:1076,75,0	1/1:26,0:26:23.61:254,24,0	1/1:7,2:9:20.75:324,21,0
chr10	54617830	.	CACACAA	C	8401.46	PASS	AB=1.000;AC=42;AF=0.750;AN=56;BaseQRankSum=-5.162;DP=769;FS=3.980;HRun=0;HaplotypeScore=186.4851;InbreedingCoeff=0.3804;MQ=53.83;MQ0=21;MQRankSum=-3.920;QD=14.10;ReadPosRankSum=-4.434;VQSLOD=3.4064;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:38,0:38:99:136,0,826	1/1:13,0:13:27.94:332,28,0	0/0:41,0:18:22.25:0,22,544	0/0:54,0:20:31.73:0,32,351	1/1:20,1:21:16.91:303,17,0	1/1:13,1:14:35.99:444,36,0	1/1:22,0:22:11.40:187,11,0	1/1:31,0:29:50.38:533,50,0	1/1:11,0:11:9.03:143,9,0	1/1:23,5:27:73.16:908,73,0	1/1:6,12:18:5.47:116,5,0	0/0:32,0:31:13.29:0,13,235	0/1:35,0:35:96.85:97,0,424	1/1:30,0:29:30.02:442,30,0	1/1:24,0:24:33.89:362,34,0	1/1:15,6:21:30.01:634,30,0	0/1:23,0:23:32.04:32,0,625	0/1:33,0:33:99:108,0,909	1/1:1,19:20:48.19:665,48,0	1/1:6,15:21:9.03:168,9,0	1/1:64,0:59:75.25:863,75,0	0/1:25,0:24:72.10:244,0,72	0/1:18,0:18:27.35:27,0,110	0/0:46,0:44:18.99:0,19,284	1/1:21,0:21:11.70:162,12,0	1/1:30,0:29:75.50:845,76,0	1/1:7,19:26:23.65:381,24,0	1/1:8,1:9:20.78:268,21,0
chr10	54617832	.	CACAA	C	7566.15	PASS	AB=1.000;AC=49;AF=0.875;AN=56;BaseQRankSum=-1.046;DP=770;FS=1.520;HRun=0;HaplotypeScore=172.0720;InbreedingCoeff=0.3962;MQ=57.50;MQ0=21;MQRankSum=-2.764;QD=11.24;ReadPosRankSum=-1.220;VQSLOD=3.9535;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:37,0:38:99:176,0,488	1/1:13,0:13:27.91:250,28,0	0/0:41,0:20:29.79:0,30,540	0/0:55,0:22:30.54:0,31,373	1/1:19,0:19:16.99:200,17,0	1/1:14,0:14:35.98:347,36,0	1/1:21,0:21:11.70:132,12,0	1/1:27,0:25:53.99:525,54,0	1/1:10,0:10:9.03:101,9,0	1/1:29,0:28:65.56:686,66,0	1/1:17,1:18:5.66:69,6,0	1/1:29,2:30:6.17:114,6,0	1/1:38,0:38:8.02:362,8,0	1/1:30,0:29:23.61:294,24,0	1/1:24,0:24:34.24:307,34,0	1/1:22,0:22:30.62:349,31,0	0/1:27,0:27:99:163,0,383	0/1:33,0:33:99:164,0,517	1/1:19,0:19:47.70:430,48,0	1/1:18,1:19:9:91,9,0	1/1:64,0:59:83.77:734,84,0	1/1:23,2:24:38.73:501,39,0	1/1:16,3:19:7.58:250,8,0	1/1:46,0:44:6.97:26,7,0	1/1:21,0:21:11.70:120,12,0	1/1:30,0:29:75.60:695,76,0	1/1:25,0:25:23.74:234,24,0	1/1:11,0:11:26.75:246,27,0
chr10	54617834	.	CAA	C	8867.29	PASS	AB=0.980;AC=49;AF=0.875;AN=56;BaseQRankSum=-0.519;DP=752;FS=3.621;HRun=3;HaplotypeScore=147.4755;InbreedingCoeff=0.4496;MQ=59.27;MQ0=20;MQRankSum=-3.078;QD=13.48;ReadPosRankSum=0.392;VQSLOD=1.8248;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:36,1:37:99:272,0,168	1/1:14,0:14:30.66:234,31,0	0/0:41,0:21:31.98:0,32,507	0/0:53,0:22:26.38:0,26,356	1/1:19,0:19:17.22:138,17,0	1/1:14,0:14:35.59:249,36,0	1/1:20,0:20:11.79:77,12,0	1/1:27,0:26:68.72:587,69,0	1/1:10,0:10:8.90:59,9,0	1/1:28,0:27:73.41:623,73,0	1/1:17,0:17:5.43:41,5,0	1/1:3,28:30:35.98:501,36,0	1/1:21,16:37:74.53:1058,75,0	1/1:26,1:26:29.06:192,29,0	1/1:23,0:23:37.03:274,37,0	1/1:21,2:23:32.43:269,32,0	0/1:27,1:28:99:224,0,142	0/1:33,0:33:99:306,0,174	1/1:19,0:19:47.38:341,47,0	1/1:18,0:18:8.31:49,8,0	1/1:58,1:57:96.01:735,96,0	1/1:21,3:23:65.64:620,66,0	1/1:15,4:19:37.31:400,37,0	1/1:3,43:44:38.98:570,39,0	1/1:19,0:19:11.74:80,12,0	1/1:29,0:29:78.47:602,78,0	1/1:22,0:23:23.60:170,24,0	1/1:8,0:10:26.63:195,27,0
chr10	54618196	.	C	CA	2088.14	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=-7.494;DP=565;FS=7.175;HRun=8;HaplotypeScore=53.4052;InbreedingCoeff=0.8969;MQ=72.41;MQ0=0;MQRankSum=-2.590;QD=22.95;ReadPosRankSum=-0.227;VQSLOD=3.9211;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:81:0,81,731	0/0:11,0:11:30:0,30,270	0/0:11,0:11:7.62:0,8,99	0/1:7,0:7:1.88:2,0,95	0/0:26,0:27:71.06:0,71,637	0/0:29,0:29:84.03:0,84,764	0/0:14,0:14:39.02:0,39,357	0/0:37,0:37:87:0,87,789	0/0:18,0:18:48.01:0,48,434	0/0:35,0:35:87.01:0,87,788	0/0:21,0:21:50.99:0,51,461	0/0:20,0:20:51.03:0,51,467	0/0:20,0:20:60.03:0,60,549	0/0:23,0:23:63.03:0,63,577	0/0:22,0:22:63.03:0,63,577	0/0:14,0:14:36.01:0,36,329	0/0:14,0:14:39.02:0,39,357	0/0:28,0:28:75.03:0,75,686	1/1:5,19:24:57.15:647,57,0	1/1:3,15:18:45.13:519,45,0	1/1:3,13:16:39.12:450,39,0	0/0:16,0:16:48.03:0,48,439	0/0:23,0:23:54:0,54,490	0/0:8,0:7:24.01:0,24,220	0/0:25,0:25:72.03:0,72,659	0/0:18,0:18:54.02:0,54,491	1/1:6,20:26:32.76:630,33,0	0/0:10,0:10:27.01:0,27,247
chr10	54619656	.	AC	A	3622.51	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=11.529;DP=564;FS=11.946;HRun=1;HaplotypeScore=53.3156;InbreedingCoeff=0.9986;MQ=81.01;MQ0=0;MQRankSum=0.256;QD=39.38;ReadPosRankSum=2.483;VQSLOD=3.3814;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:87.30:0,87,1357	0/0:12,0:12:36.12:0,36,563	0/0:25,0:24:62.33:0,62,957	0/0:11,0:11:30.10:0,30,470	0/0:18,0:18:54.16:0,54,819	0/0:31,0:31:93.29:0,93,1430	0/0:20,0:20:60.17:0,60,893	0/0:32,0:32:93.27:0,93,1357	0/0:15,0:15:45.13:0,45,680	0/0:24,0:24:69.23:0,69,1079	0/0:22,0:22:66.22:0,66,1032	0/0:22,0:22:66.21:0,66,1009	0/0:16,0:16:48.15:0,48,714	0/0:15,0:15:45.14:0,45,682	0/0:22,0:22:66.21:0,66,1010	0/0:12,0:12:36.12:0,36,560	0/0:18,0:18:51.16:0,51,775	0/0:20,0:20:54.18:0,54,844	1/1:1,22:23:69.15:897,69,0	1/1:0,23:23:66.22:922,66,0	1/1:0,14:14:36.12:503,36,0	0/0:12,0:12:36.10:0,36,536	0/0:15,0:15:45.14:0,45,679	0/0:16,0:16:48.16:0,48,751	0/0:24,0:24:72.15:0,72,1074	0/0:34,0:33:99:0,102,1595	1/1:0,32:32:93.31:1300,93,0	0/0:7,0:7:21.05:0,21,304
chr10	54620338	.	G	GA	9562.23	PASS	AB=0.780;AC=44;AF=0.786;AN=56;BaseQRankSum=-9.678;DP=512;FS=20.443;HRun=9;HaplotypeScore=55.3435;InbreedingCoeff=0.8082;MQ=81.78;MQ0=0;MQRankSum=-2.099;QD=23.55;ReadPosRankSum=3.834;VQSLOD=3.5343;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,28:33:55.47:836,55,0	1/1:0,5:4:15.04:166,15,0	0/0:43,0:35:43.10:0,43,408	0/1:31,0:22:0.85:1,0,204	0/1:3,10:14:9.41:335,0,9	1/1:2,26:28:72.19:796,72,0	1/1:2,16:18:45.12:498,45,0	1/1:5,24:29:69.16:747,69,0	1/1:2,16:18:48.08:516,48,0	1/1:6,21:27:37.11:631,37,0	1/1:2,11:13:36.10:396,36,0	1/1:3,13:16:33.09:364,33,0	1/1:2,11:13:24.06:266,24,0	1/1:3,7:10:15.04:166,15,0	1/1:0,12:12:29.87:332,30,0	1/1:1,14:15:33.09:365,33,0	1/1:4,31:35:90.92:1013,91,0	1/1:4,14:18:36.10:398,36,0	0/0:15,0:14:41.99:0,42,364	0/0:10,0:10:26.99:0,27,234	0/0:12,0:13:32.03:0,32,266	1/1:3,9:12:7.04:304,7,0	1/1:2,13:15:36.10:398,36,0	1/1:1,9:10:18.05:199,18,0	1/1:1,9:10:15.04:166,15,0	1/1:1,11:12:33.09:365,33,0	0/0:22,0:22:44.94:0,45,390	1/1:1,10:11:7.03:306,7,0
chr10	54621208	.	GC	G	15996.21	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-4.638;DP=633;FS=16.900;HRun=6;HaplotypeScore=74.1402;InbreedingCoeff=0.9937;MQ=88.01;MQ0=0;MQRankSum=-10.529;QD=27.30;ReadPosRankSum=4.922;VQSLOD=3.5142;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:12,30:42:84.21:903,84,0	1/1:1,10:11:18.04:193,18,0	0/0:29,0:29:75.22:0,75,942	0/0:18,0:18:45.14:0,45,583	1/1:1,13:14:33.08:354,33,0	1/1:1,14:15:42.11:451,42,0	1/1:3,25:28:69.17:742,69,0	1/1:0,29:29:81.19:863,81,0	1/1:0,21:21:54.14:580,54,0	1/1:2,17:19:51.13:547,51,0	1/1:1,12:13:36.09:387,36,0	1/1:2,24:26:63.16:677,63,0	1/1:2,27:29:75.19:806,75,0	1/1:1,32:33:90.22:967,90,0	1/1:0,28:28:81.20:871,81,0	1/1:1,23:24:66.17:709,66,0	1/1:1,24:25:72.18:774,72,0	1/1:1,21:22:60.15:645,60,0	1/1:5,25:30:75.16:796,75,0	1/1:1,17:18:36.09:387,36,0	1/1:3,50:53:99:1483,138,0	1/1:1,17:18:48.12:516,48,0	1/1:2,13:15:27.07:290,27,0	1/1:0,18:18:48.12:516,48,0	1/1:2,15:16:39.10:419,39,0	1/1:0,11:11:30.06:314,30,0	1/1:0,18:18:51.13:548,51,0	1/1:0,9:9:24.06:258,24,0
chr10	54621535	.	T	TGG	4476.39	PASS	AB=0.800;AC=21;AF=0.389;AN=54;BaseQRankSum=-11.794;DP=522;FS=29.879;HRun=0;HaplotypeScore=111.2461;InbreedingCoeff=-0.4925;MQ=45.07;MQ0=7;MQRankSum=4.480;QD=11.94;ReadPosRankSum=0.553;VQSLOD=2.9475;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:30,2:26:58.94:584,0,59	0/1:7,1:8:74.04:74,0,130	0/0:12,0:6:18.05:0,18,226	0/0:7,0:4:8.76:0,9,59	0/1:12,11:24:3.24:3,0,247	0/1:23,1:20:99:118,0,337	0/1:9,0:7:42.01:128,0,42	0/1:12,23:31:99:822,0,144	0/1:17,2:19:99:375,0,136	0/1:15,16:30:99:287,0,302	0/0:10,9:19:26.81:0,27,270	0/1:3,8:12:32.78:33,0,41	0/1:17,2:17:99:184,0,207	0/1:19,0:14:99:206,0,121	0/1:20,0:18:89.39:331,0,89	0/0:6,13:19:18.04:0,18,189	0/1:5,1:12:25.85:26,0,80	0/1:13,1:12:63.69:219,0,64	0/0:25,0:22:43.40:0,43,360	0/0:27,0:27:37.52:0,38,322	./.	0/1:3,12:15:50.49:101,0,50	0/1:8,9:17:46.39:46,0,126	1/1:5,1:6:6.02:83,6,0	0/1:18,3:19:99:331,0,147	0/1:10,15:24:99:355,0,191	0/0:37,0:34:69.82:0,70,537	0/1:9,2:8:37.80:170,0,38
chr10	54621537	.	T	TTTTTTTTGTTGTTGTTGTTTTTTTTG	68677.94	PASS	AB=1.000;AC=51;AF=0.944;AN=54;BaseQRankSum=1.111;DP=509;FS=29.226;HRun=0;HaplotypeScore=317.2310;InbreedingCoeff=0.5233;MQ=44.02;MQ0=9;MQRankSum=-5.418;QD=138.18;ReadPosRankSum=6.913;VQSLOD=3.3849;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:28,2:25:55.09:4099,55,0	1/1:7,1:8:24.08:2317,24,0	0/0:12,0:6:11.97:0,12,215	0/1:8,0:4:4.18:4,0,154	1/1:22,0:22:29.61:2390,30,0	1/1:22,1:20:44.55:4552,45,0	1/1:9,0:7:14.74:788,15,0	1/1:31,0:27:51.53:2947,52,0	1/1:17,2:19:33.47:3409,33,0	1/1:30,0:28:64.98:4617,65,0	1/1:19,0:18:26.50:1539,26,0	1/1:12,0:12:8.83:823,9,0	1/1:17,1:16:40.85:2978,41,0	1/1:19,0:14:17.93:2449,18,0	1/1:19,0:17:34.68:2674,35,0	1/1:19,0:19:17.99:1625,18,0	1/1:12,0:11:15.05:1246,15,0	1/1:14,1:12:20.24:1850,20,0	1/1:26,0:22:6.73:2009,7,0	1/1:26,0:26:32.26:5087,32,0	./.	1/1:14,0:14:11.74:747,12,0	1/1:16,1:17:24.01:2053,24,0	1/1:4,1:5:5.99:563,6,0	1/1:18,3:19:50.96:4496,51,0	1/1:24,1:24:50.06:4598,50,0	1/1:37,0:34:93.19:6855,93,0	1/1:9,2:8:0.95:1963,1,0
chr10	54622641	.	C	CTCT	5454.78	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-7.038;DP=610;FS=0.881;HRun=0;HaplotypeScore=85.0622;InbreedingCoeff=0.9929;MQ=80.57;MQ0=0;MQRankSum=-3.601;QD=51.95;ReadPosRankSum=-0.191;VQSLOD=6.9566;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,129,2083	0/0:6,0:6:18.06:0,18,293	0/0:22,0:22:57.40:0,57,936	0/0:14,0:14:36.84:0,37,593	0/0:12,0:12:30.10:0,30,490	0/0:32,0:32:93.30:0,93,1490	0/0:18,0:18:45.15:0,45,734	0/0:28,0:28:75.25:0,75,1192	0/0:24,0:24:63.22:0,63,1027	0/0:20,0:20:57.19:0,57,900	0/0:7,0:7:18.06:0,18,283	0/0:28,0:28:72.23:0,72,1131	0/0:22,0:22:57.19:0,57,907	0/0:38,0:38:99:0,105,1678	0/0:18,0:18:51.17:0,51,833	0/0:22,0:22:60.19:0,60,934	0/0:31,0:31:84.26:0,84,1329	0/0:12,0:12:29.84:0,30,453	1/1:6,25:32:90.27:1912,90,0	1/1:2,6:8:21.03:422,21,0	1/1:2,34:38:81.73:1746,82,0	0/0:8,0:8:21.07:0,21,343	0/0:14,0:14:36.09:0,36,559	0/0:17,0:17:51.17:0,51,833	0/0:21,0:20:51.17:0,51,821	0/0:27,0:27:72.24:0,72,1153	1/1:11,16:27:69.13:1375,69,0	0/0:20,0:20:57.18:0,57,885
chr10	54622725	.	T	TCTC	5388.68	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-8.703;DP=601;FS=2.051;HRun=0;HaplotypeScore=95.6552;InbreedingCoeff=0.9998;MQ=83.99;MQ0=0;MQRankSum=-3.473;QD=51.32;ReadPosRankSum=1.449;VQSLOD=6.7598;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,105,1717	0/0:11,0:11:33.11:0,33,550	0/0:21,0:21:44.50:0,45,712	0/0:17,0:17:45.12:0,45,664	0/0:24,0:24:66.23:0,66,1091	0/0:25,0:25:75.26:0,75,1246	0/0:27,0:27:75.26:0,75,1229	0/0:30,0:30:84.23:0,84,1288	0/0:16,0:16:48.16:0,48,800	0/0:23,0:23:66.22:0,66,1075	0/0:12,0:12:36.10:0,36,549	0/0:21,0:21:60.20:0,60,993	0/0:16,0:16:39.12:0,39,615	0/0:19,0:19:54.17:0,54,867	0/0:17,0:17:51.16:0,51,821	0/0:16,0:16:48.16:0,48,792	0/0:24,0:24:66.23:0,66,1089	0/0:28,0:28:72.20:0,72,1169	1/1:10,20:29:78.26:1695,78,0	1/1:1,18:20:48.16:1087,48,0	1/1:6,15:21:42.13:909,42,0	0/0:13,0:13:39.13:0,39,650	0/0:17,0:17:45.15:0,45,743	0/0:18,0:18:51.16:0,51,811	0/0:19,0:19:57.19:0,57,948	0/0:22,0:22:66.23:0,66,1097	1/1:3,30:34:78.16:1699,78,0	0/0:22,0:22:66.16:0,66,979
chr10	54622835	.	C	CT	1297.65	PASS	AB=0.685;AC=13;AF=0.232;AN=56;BaseQRankSum=-6.773;DP=491;FS=2.637;HRun=13;HaplotypeScore=73.3281;InbreedingCoeff=0.4851;MQ=64.06;MQ0=6;MQRankSum=-0.136;QD=8.77;ReadPosRankSum=2.231;VQSLOD=3.0969;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:8,14:20:19.70:264,0,20	0/0:18,0:18:32.30:0,32,216	0/1:17,0:10:4.84:5,0,53	0/0:9,0:5:1.48:0,1,7	0/0:15,0:16:28.78:0,29,191	0/0:19,0:22:29.75:0,30,179	0/0:12,0:11:14.81:0,15,101	0/0:15,0:30:27.82:0,28,82	0/0:13,0:13:17.70:0,18,118	0/0:22,1:23:13.57:0,14,239	0/0:25,0:27:48.22:0,48,310	1/1:3,14:17:26.98:242,27,0	1/1:4,4:7:8.96:75,9,0	0/0:15,0:15:29:0,29,189	0/0:8,0:8:2.90:0,3,20	0/0:17,0:17:29.64:0,30,204	1/1:8,16:24:38.06:361,38,0	1/1:3,11:15:10.80:121,11,0	0/0:12,0:12:17.78:0,18,122	0/0:27,1:29:27.59:0,28,324	0/0:9,2:10:14.80:0,15,103	0/1:3,7:10:2.56:121,0,3	0/1:8,11:19:17.47:182,0,17	0/1:5,11:16:22.25:95,0,22	0/0:14,0:15:25.74:0,26,169	0/0:21,0:22:37.63:0,38,249	0/0:17,0:18:22.70:0,23,150	0/0:20,0:22:39.72:0,40,258
chr10	54626291	.	G	GCACACACACA	2438.83	PASS	AB=0.895;AC=29;AF=0.659;AN=44;BaseQRankSum=-3.083;DP=424;FS=2.962;HRun=0;HaplotypeScore=139.1206;InbreedingCoeff=0.3744;MQ=51.84;MQ0=11;MQRankSum=-3.490;QD=9.87;ReadPosRankSum=-4.455;VQSLOD=0.5618;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:26:50.81:51,0,568	1/1:8,1:11:6.02:161,6,0	./.	./.	1/1:10,0:15:3.01:59,3,0	./.	1/1:14,0:14:6.02:160,6,0	1/1:23,0:21:17.98:299,18,0	./.	1/1:11,1:15:16.30:418,16,0	0/0:14,5:22:0.47:0,0,1	1/1:5,0:5:6:127,6,0	1/1:3,0:12:9.03:262,9,0	./.	1/1:12,0:15:3.01:69,3,0	1/1:5,1:8:3.01:130,3,0	0/0:30,0:30:14.92:0,15,1230	0/1:30,0:30:37.80:38,0,788	0/0:10,0:15:10.29:0,10,249	0/0:7,0:12:3.01:0,3,34	./.	1/1:13,0:14:2.17:98,2,0	0/1:7,0:11:0.09:0,0,0	1/1:14,0:17:0.47:1,0,0	0/0:14,3:19:0.47:0,0,2	1/1:14,4:16:21.07:601,21,0	0/0:4,0:12:9.03:0,9,174	1/1:0,0:2:3.01:97,3,0
chr10	54626799	.	C	CA	7429.93	PASS	AB=0.833;AC=55;AF=0.982;AN=56;BaseQRankSum=-2.416;DP=280;FS=3.408;HRun=6;HaplotypeScore=53.6707;InbreedingCoeff=-0.0349;MQ=54.23;MQ0=0;MQRankSum=-2.382;QD=26.54;ReadPosRankSum=-0.073;VQSLOD=4.8262;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,16:17:36.07:435,36,0	1/1:0,9:9:9.03:113,9,0	1/1:0,2:0:3:38,3,0	0/1:4,1:4:21.86:22,0,23	1/1:1,9:10:15.01:171,15,0	1/1:0,12:12:36.12:453,36,0	1/1:1,9:10:27.09:340,27,0	1/1:2,17:18:48.11:586,48,0	1/1:0,10:10:27.04:322,27,0	1/1:1,11:12:24.08:302,24,0	1/1:0,13:13:24.08:302,24,0	1/1:0,5:5:12.04:151,12,0	1/1:0,6:6:15.01:172,15,0	1/1:1,9:10:24.08:302,24,0	1/1:1,14:14:36.03:417,36,0	1/1:1,17:18:48.04:552,48,0	1/1:4,21:25:63.12:756,63,0	1/1:3,8:11:24.08:302,24,0	1/1:2,0:3:5.72:29,6,0	1/1:2,0:8:19.99:102,20,0	1/1:0,0:5:8.52:44,9,0	1/1:1,7:8:18.05:215,18,0	1/1:0,5:5:12.04:151,12,0	1/1:1,3:4:6.02:75,6,0	1/1:1,8:9:21.07:264,21,0	1/1:0,15:15:42.11:513,42,0	1/1:1,0:9:22.79:116,23,0	1/1:0,5:5:15.05:189,15,0
chr10	54626915	.	TG	T	786.21	PASS	AB=1.000;AC=10;AF=0.179;AN=56;BaseQRankSum=3.616;DP=368;FS=40.699;HRun=1;HaplotypeScore=80.6700;InbreedingCoeff=0.6597;MQ=66.03;MQ0=1;MQRankSum=-10.491;QD=13.33;ReadPosRankSum=1.008;VQSLOD=0.6106;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:33.57:0,34,164	0/1:4,0:4:1.34:1,0,10	0/0:6,0:5:15:0,15,142	0/0:8,0:8:2.56:0,3,52	0/0:26,0:26:17.47:0,17,139	0/1:15,0:15:0.85:1,0,53	0/0:8,0:8:11.19:0,11,57	0/0:25,0:25:60.42:0,60,390	0/0:7,0:7:7.90:0,8,62	0/0:6,0:6:12.31:0,12,65	0/0:18,0:18:27.35:0,27,153	0/0:9,0:9:13.65:0,14,110	0/0:10,0:10:1.17:0,1,34	0/0:12,0:12:22.83:0,23,97	0/0:9,0:9:1.96:0,2,28	0/0:14,0:14:8.81:0,9,74	0/0:29,0:29:44.50:0,45,236	0/0:16,0:16:33.41:0,33,145	1/1:7,4:11:29.96:275,30,0	1/1:4,10:14:35.98:321,36,0	1/1:3,6:9:17.97:168,18,0	0/0:10,0:10:8.98:0,9,51	0/0:12,0:12:10.98:0,11,125	0/0:11,0:11:20.05:0,20,107	0/0:18,0:18:26.08:0,26,157	0/0:22,0:22:41.18:0,41,279	1/1:2,4:6:18.02:174,18,0	0/0:14,0:14:13.72:0,14,59
chr10	54627364	.	G	GGAAA	1488.51	PASS	AB=0.692;AC=19;AF=0.339;AN=56;BaseQRankSum=6.430;DP=495;FS=3.500;HRun=0;HaplotypeScore=106.9625;InbreedingCoeff=-0.5474;MQ=49.48;MQ0=27;MQRankSum=-3.540;QD=4.24;ReadPosRankSum=-3.797;VQSLOD=1.1519;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:12,0:28:91.20:151,0,91	0/1:7,0:12:63.18:63,0,76	0/0:22,0:2:5.58:0,6,33	0/0:20,0:3:5.72:0,6,65	0/1:9,0:25:94.59:139,0,95	0/1:8,0:19:68.27:68,0,80	0/1:7,0:15:21.38:70,0,21	0/1:21,0:22:62.25:119,0,62	0/1:9,0:15:21.07:21,0,133	0/1:13,2:25:99:270,0,146	0/1:9,0:20:57.07:201,0,57	0/0:6,0:10:15.51:0,16,143	0/1:16,0:19:19.69:20,0,196	0/1:18,0:19:34.61:35,0,109	0/1:7,0:16:41.38:41,0,67	0/1:6,0:9:56.67:57,0,60	0/1:10,0:28:47.59:122,0,48	0/1:3,0:11:13:59,0,13	0/0:15,0:13:35.63:0,36,305	0/0:21,0:20:1.47:0,1,292	0/0:8,0:8:14.70:0,15,104	0/1:4,0:12:25.02:25,0,79	0/1:7,0:17:9.84:10,0,166	0/0:5,0:13:20.98:0,21,208	0/1:4,2:14:11.25:89,0,11	0/1:14,0:17:83.27:83,0,110	0/0:19,0:19:44.71:0,45,350	0/0:7,0:8:2.97:0,3,108
chr10	54627374	.	A	AAG	1958.18	PASS	AB=1.000;AC=12;AF=0.214;AN=56;BaseQRankSum=1.197;DP=517;FS=5.608;HRun=0;HaplotypeScore=70.3423;InbreedingCoeff=0.4296;MQ=53.59;MQ0=22;MQRankSum=-0.460;QD=13.89;ReadPosRankSum=5.186;VQSLOD=2.6072;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,1:33:11.61:0,12,275	0/0:11,0:11:6.47:0,6,122	0/0:24,0:3:2.32:0,2,50	0/0:25,0:6:2.16:0,2,24	0/0:23,0:22:1.81:0,2,90	0/0:20,0:20:22.60:0,23,163	0/0:14,0:14:1.32:0,1,124	0/0:27,0:26:52.73:0,53,370	0/1:12,0:11:16.54:17,0,62	0/0:28,0:28:46.03:0,46,347	0/0:19,0:19:14.52:0,15,170	0/0:9,0:8:17.42:0,17,107	0/0:23,0:22:47.48:0,47,337	0/0:17,0:17:9.65:0,10,174	0/0:17,0:17:19.23:0,19,158	0/0:8,0:8:15.83:0,16,124	0/1:30,0:28:16.97:17,0,118	0/1:12,0:12:4.26:4,0,33	1/1:1,18:18:50.79:564,51,0	1/1:2,19:20:47.89:641,48,0	1/1:2,12:13:17.42:246,17,0	0/0:12,0:12:23.87:0,24,148	0/0:19,0:19:32.20:0,32,260	0/0:15,0:13:17.35:0,17,115	0/0:23,0:23:22.52:0,23,293	0/1:17,0:17:16.11:16,0,133	1/1:1,14:15:39.13:619,39,0	0/0:7,0:5:4.43:0,4,19
chr10	54627798	.	A	AAC	7469.88	PASS	AB=0.699;AC=33;AF=0.589;AN=56;BaseQRankSum=-7.591;DP=734;FS=4.722;HRun=0;HaplotypeScore=118.6327;InbreedingCoeff=-0.5103;MQ=65.01;MQ0=10;MQRankSum=0.789;QD=11.28;ReadPosRankSum=0.684;VQSLOD=4.2215;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:17,23:41:19.03:585,0,19	0/1:4,5:10:32.56:122,0,33	0/0:41,0:22:5.71:0,6,39	0/0:30,0:24:3.01:0,3,34	0/1:20,11:32:99:325,0,100	0/1:16,9:25:76.27:204,0,76	0/1:21,10:31:39.85:491,0,40	0/1:16,3:19:24.49:62,0,24	0/1:15,12:29:15.26:203,0,15	0/1:12,8:22:20.68:292,0,21	0/1:18,9:31:99:280,0,128	0/1:15,13:29:98.30:377,0,98	0/1:15,10:24:40.13:206,0,40	0/1:14,10:26:60.05:156,0,60	0/1:15,13:30:99:322,0,156	1/1:14,15:31:2.05:530,2,0	0/1:18,11:29:87.47:311,0,87	0/1:11,19:31:99:700,0,143	1/1:17,0:17:19.59:146,20,0	1/1:19,0:18:6.02:77,6,0	1/1:20,0:20:8.77:93,9,0	0/1:9,14:23:27.88:461,0,28	0/1:11,8:20:73.02:73,0,116	0/1:22,22:44:99:662,0,134	1/1:4,8:12:21.06:299,21,0	0/1:19,13:32:29.25:329,0,29	1/1:22,0:20:12.01:118,12,0	1/1:3,3:6:3.01:45,3,0
chr10	54628528	.	C	CA	13725.07	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=4.220;DP=607;FS=0.973;HRun=1;HaplotypeScore=97.8333;InbreedingCoeff=0.9964;MQ=73.51;MQ0=0;MQRankSum=-2.393;QD=38.77;ReadPosRankSum=0.944;VQSLOD=5.0691;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,108,1506	1/1:1,11:12:36.11:552,36,0	0/0:16,0:16:39.12:0,39,526	0/0:10,0:10:20.08:0,20,306	1/1:0,12:12:27.09:432,27,0	1/1:0,22:22:63.21:1007,63,0	1/1:0,24:24:66.23:1055,66,0	1/1:0,14:14:42.13:649,42,0	1/1:0,28:29:83.98:1333,84,0	1/1:0,13:13:39.13:619,39,0	1/1:1,13:14:36.12:575,36,0	0/0:39,0:39:99:0,103,589	0/0:13,0:13:37.96:0,38,220	1/1:0,29:29:84.29:1342,84,0	1/1:1,17:18:48.16:768,48,0	1/1:0,20:20:54.18:863,54,0	0/0:49,0:49:99:0,144,2012	0/0:24,0:24:66.22:0,66,922	1/1:3,0:15:34.18:242,34,0	1/1:2,0:15:38.63:291,39,0	1/1:0,0:37:99:811,107,0	0/0:14,0:14:37.83:0,38,218	0/0:5,0:5:14.63:0,15,89	0/0:47,0:47:99:0,134,758	1/1:0,20:20:60.19:937,60,0	1/1:0,22:22:63.21:1008,63,0	1/1:1,0:22:40.75:474,41,0	1/1:0,16:16:48.16:767,48,0
chr10	54629523	.	T	TGGAG	2302.59	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-9.408;DP=641;FS=4.360;HRun=0;HaplotypeScore=143.2933;InbreedingCoeff=0.9845;MQ=71.06;MQ0=2;MQRankSum=-0.942;QD=35.42;ReadPosRankSum=2.732;VQSLOD=3.9029;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,22:29:48.16:1186,48,0	0/0:7,0:7:18.06:0,18,300	0/0:36,0:33:51.05:0,51,757	0/0:24,0:23:29.96:0,30,474	0/0:18,0:18:48.16:0,48,810	0/0:19,0:19:48.16:0,48,805	0/0:25,0:25:63.18:0,63,1006	0/0:31,0:31:27.08:0,27,410	0/0:20,0:20:45.15:0,45,760	0/0:26,0:26:60.20:0,60,1010	0/0:17,0:17:42.14:0,42,696	0/0:44,0:44:99:0,111,1804	0/0:18,0:18:51.17:0,51,861	0/0:22,0:22:51.16:0,51,835	0/0:34,0:34:93.30:0,93,1538	0/0:28,0:28:60.19:0,60,979	1/1:6,16:23:39.13:957,39,0	1/1:8,5:13:12.04:299,12,0	0/0:11,0:11:24.08:0,24,398	0/0:17,0:17:30.08:0,30,506	0/0:22,0:22:51.17:0,51,857	0/0:22,0:22:42.13:0,42,683	0/0:25,0:25:57.18:0,57,924	0/0:22,0:21:54.18:0,54,910	0/0:24,0:24:60.17:0,60,941	0/0:30,0:30:69.23:0,69,1133	0/0:16,0:16:48.15:0,48,784	0/0:18,0:18:51.17:0,51,861
chr10	54632804	.	T	TAACAAC	3969.23	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-1.756;DP=642;FS=0.557;HRun=0;HaplotypeScore=130.7006;InbreedingCoeff=0.9577;MQ=71.12;MQ0=0;MQRankSum=-9.722;QD=43.14;ReadPosRankSum=-4.353;VQSLOD=2.3620;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:43.29:0,43,1247	0/0:6,0:6:12.04:0,12,251	0/0:25,0:25:33.07:0,33,589	0/0:19,0:19:18.04:0,18,323	0/0:27,0:27:51.13:0,51,1023	0/0:36,0:36:90.27:0,90,1781	0/0:25,0:25:57.20:0,57,1162	0/0:41,0:41:62.19:0,62,1309	0/0:20,0:20:51.18:0,51,1065	0/0:30,0:30:54.17:0,54,1075	0/0:19,0:19:48.14:0,48,930	0/0:27,0:27:63.22:0,63,1318	0/0:19,0:19:45.15:0,45,942	0/0:15,0:15:30.09:0,30,588	0/0:24,0:24:45.12:0,45,863	0/0:20,0:20:48.16:0,48,1004	0/0:24,0:24:54.18:0,54,1093	0/0:24,0:24:45.15:0,45,935	1/1:14,6:23:40.64:1008,41,0	1/1:20,11:32:54.95:1641,55,0	1/1:13,0:13:5.81:61,6,0	0/0:27,0:27:51.13:0,51,1067	0/0:21,0:21:57.18:0,57,1153	0/0:15,0:15:27.09:0,27,565	0/0:17,0:17:45.15:0,45,903	0/0:24,0:24:47.81:0,48,800	1/1:12,11:24:39.13:1259,39,0	0/0:15,0:15:45.15:0,45,941
chr10	54634737	.	C	CTTT	4653.04	PASS	AB=1.000;AC=53;AF=0.946;AN=56;BaseQRankSum=-0.713;DP=385;FS=22.827;HRun=16;HaplotypeScore=113.2380;InbreedingCoeff=0.0581;MQ=63.99;MQ0=13;MQRankSum=-1.656;QD=12.09;ReadPosRankSum=-2.808;VQSLOD=0.0924;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:30:63.09:604,63,0	1/1:2,0:2:3.01:34,3,0	0/1:24,0:11:18.85:19,0,30	0/1:17,0:14:17.59:18,0,45	1/1:8,0:9:6.85:56,7,0	1/1:18,1:21:44.67:441,45,0	1/1:11,3:15:12.22:294,12,0	1/1:17,6:25:41.85:401,42,0	1/1:12,0:13:10.41:146,10,0	1/1:11,0:13:16.57:172,17,0	1/1:8,0:8:7.52:57,8,0	1/1:15,0:12:10.98:61,11,0	1/1:5,0:5:9.86:84,10,0	1/1:15,0:16:23:208,23,0	1/1:10,4:12:18.06:249,18,0	1/1:10,0:9:11.69:73,12,0	1/1:24,0:23:35.61:250,36,0	1/1:17,0:15:2.89:116,3,0	1/1:25,0:23:29.95:308,30,0	1/1:10,0:10:17.98:173,18,0	0/1:2,0:2:0:0,0,0	1/1:8,0:7:8.95:67,9,0	1/1:6,0:5:12.87:119,13,0	1/1:14,0:11:13.32:96,13,0	1/1:5,0:6:9.03:129,9,0	1/1:9,3:13:18.37:188,18,0	1/1:14,0:14:34.24:272,34,0	1/1:1,0:1:2.96:19,3,0
chr10	54634766	.	T	TTC	918.67	PASS	AB=0.571;AC=7;AF=0.130;AN=54;BaseQRankSum=-2.449;DP=240;FS=11.863;HRun=0;HaplotypeScore=42.0296;InbreedingCoeff=0.5726;MQ=36.69;MQ0=22;MQRankSum=-2.924;QD=27.02;ReadPosRankSum=0.341;VQSLOD=3.6134;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:19:48.04:0,48,619	0/0:2,0:2:6.02:0,6,87	./.	0/0:4,0:3:2.30:0,2,17	0/0:5,0:5:15.04:0,15,197	0/0:10,0:10:27.09:0,27,392	0/0:17,0:15:35.72:0,36,387	0/0:14,0:12:30.07:0,30,413	0/0:8,0:8:24.03:0,24,303	0/0:11,0:10:29.87:0,30,352	0/0:9,0:6:12.03:0,12,159	0/0:4,0:3:6.02:0,6,87	0/0:5,0:5:15.05:0,15,218	0/0:10,0:10:14.62:0,15,234	0/0:8,0:7:15.87:0,16,232	0/0:9,0:6:18.03:0,18,221	0/0:17,0:17:29.75:0,30,353	0/0:8,0:8:18.02:0,18,240	1/1:1,9:9:27.09:506,27,0	1/1:1,2:2:3.01:57,3,0	1/1:5,8:11:8.92:169,9,0	0/0:6,0:5:11.64:0,12,113	0/0:7,0:6:11.90:0,12,145	0/0:13,0:10:13.81:0,14,216	0/0:5,0:5:9.03:0,9,131	0/0:7,0:7:15.04:0,15,218	0/1:2,6:7:22.19:318,0,22	0/0:5,0:3:6.02:0,6,87
chr10	54634936	.	A	AATACCTATCATAATCCTCCCC	1059.79	PASS	AB=0.833;AC=11;AF=0.917;AN=12;BaseQRankSum=-0.810;DP=17;FS=5.740;HRun=0;HaplotypeScore=37.2908;MQ=187.52;MQ0=0;MQRankSum=-1.273;QD=70.65;ReadPosRankSum=-0.116;VQSLOD=1.4419;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	1/1:1,1:4:12.01:589,12,0	0/1:4,0:5:24.33:300,0,24	./.	./.	./.	1/1:2,0:2:6.02:100,6,0	./.	1/1:1,0:1:3:28,3,0	./.	./.	./.	./.	./.	./.	1/1:1,0:1:3.01:49,3,0	./.	./.	./.	./.	./.	./.	1/1:2,0:2:5.98:69,6,0	./.	./.	./.	./.
chr10	54638702	.	T	TCCACAC	8137.80	PASS	AB=0.721;AC=38;AF=0.679;AN=56;BaseQRankSum=9.409;DP=697;FS=6.233;HRun=0;HaplotypeScore=218.5267;InbreedingCoeff=-0.1333;MQ=68.33;MQ0=10;MQRankSum=-6.077;QD=13.04;ReadPosRankSum=0.745;VQSLOD=3.6472;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:34,0:33:42.89:395,43,0	0/1:8,0:8:9.87:10,0,85	0/0:31,0:18:50.04:0,50,518	0/0:41,0:28:64.93:0,65,594	0/1:9,0:21:99:132,0,157	0/1:9,0:15:74.54:84,0,75	0/1:16,0:30:74.23:74,0,354	0/1:19,0:19:99:174,0,295	0/1:13,0:25:65.25:65,0,283	0/1:21,0:31:99:270,0,334	0/1:9,0:16:16.20:16,0,209	1/1:29,0:28:34.56:444,35,0	1/1:23,0:23:50.76:682,51,0	0/1:10,0:27:99:126,0,103	0/1:8,0:16:30.32:30,0,247	0/1:16,0:27:99:368,0,196	1/1:24,0:23:48.85:872,49,0	1/1:13,0:13:35.76:537,36,0	1/1:5,21:28:80.74:1007,81,0	1/1:22,0:21:30.80:304,31,0	1/1:24,0:22:26.64:336,27,0	1/1:26,0:25:41.85:351,42,0	1/1:22,0:19:26.81:204,27,0	1/1:32,0:31:32.35:350,32,0	0/1:12,0:33:99:126,0,266	0/1:23,0:35:99:380,0,353	1/1:5,1:21:21.63:605,22,0	0/1:6,0:15:81.07:196,0,81
chr10	54639214	.	TTA	T	5387.49	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-12.872;DP=384;FS=5.984;HRun=0;HaplotypeScore=61.1867;InbreedingCoeff=0.9088;MQ=65.79;MQ0=0;MQRankSum=0.098;QD=28.36;ReadPosRankSum=4.251;VQSLOD=6.0515;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,15:16:36.07:436,36,0	0/0:4,0:4:9.03:0,9,145	0/0:3,0:3:6:0,6,65	0/0:5,0:4:3.01:0,3,46	0/0:12,0:12:29.82:0,30,423	0/0:17,0:17:51.16:0,51,797	0/0:8,0:8:15.03:0,15,217	0/0:36,0:36:75.65:0,76,1148	0/0:5,0:5:15.05:0,15,241	0/0:12,0:12:33.11:0,33,495	0/0:15,0:15:3.33:0,3,405	1/1:2,14:16:36.12:454,36,0	1/1:0,11:11:27.09:340,27,0	0/0:8,0:8:24.05:0,24,337	0/0:12,0:12:33.11:0,33,523	0/0:11,0:11:27.06:0,27,388	1/1:1,9:10:24.08:303,24,0	1/1:4,25:29:63.20:794,63,0	1/1:1,10:11:30.07:352,30,0	1/1:5,23:28:72.16:874,72,0	1/1:2,2:4:6.02:76,6,0	1/1:1,9:10:27.04:322,27,0	1/1:3,15:18:39.12:492,39,0	1/1:2,6:8:18.06:227,18,0	0/0:21,0:21:60.18:0,60,904	0/0:13,0:13:24.07:0,24,345	1/1:3,26:29:57.18:719,57,0	0/0:12,0:12:30.10:0,30,483
chr10	54641343	.	GC	G	8397.84	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=11.709;DP=711;FS=1.299;HRun=2;HaplotypeScore=72.7497;InbreedingCoeff=0.9971;MQ=86.49;MQ0=0;MQRankSum=-6.769;QD=36.04;ReadPosRankSum=7.704;VQSLOD=4.3807;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,39:39:99:1400,108,0	0/0:9,0:9:27.09:0,27,404	0/0:26,0:26:75.23:0,75,1037	0/0:29,0:29:78.13:0,78,1007	0/0:19,0:19:54.16:0,54,764	0/0:27,0:27:81.27:0,81,1189	0/0:29,0:29:87.29:0,87,1304	0/0:37,0:37:99:0,102,1414	0/0:23,0:23:69.21:0,69,995	0/0:26,0:26:78.25:0,78,1117	0/0:24,0:24:66.20:0,66,942	1/1:0,40:40:99:1519,117,0	1/1:0,21:21:60.19:772,60,0	0/0:28,0:28:84.28:0,84,1248	0/0:28,0:28:84.28:0,84,1259	0/0:16,0:16:48.15:0,48,699	1/1:0,27:27:69.22:893,69,0	1/1:0,16:16:45.15:584,45,0	0/0:12,0:12:33.10:0,33,474	0/0:28,0:28:75.25:0,75,1106	0/0:25,0:25:72.24:0,72,1076	1/1:0,36:36:96.31:1246,96,0	1/1:1,28:29:81.26:1049,81,0	1/1:0,25:25:72.23:935,72,0	0/0:28,0:28:81.27:0,81,1208	0/0:23,0:23:69.17:0,69,955	0/0:36,0:36:99:0,105,1559	0/0:5,0:5:15.05:0,15,221
chr10	54642440	.	T	TAACTTCAAAGGGAGAAAAATCACTC	2068.47	PASS	AB=0.764;AC=22;AF=0.917;AN=24;BaseQRankSum=-2.619;DP=30;FS=12.270;HRun=0;HaplotypeScore=38.3593;InbreedingCoeff=-0.2463;MQ=171.61;MQ0=0;MQRankSum=-1.571;QD=71.33;ReadPosRankSum=-0.786;VQSLOD=0.7314;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:4:12.01:139,12,0	./.	0/1:5,0:7:49.73:654,0,50	0/1:4,1:6:8.46:777,0,8	1/1:0,0:1:3.01:146,3,0	1/1:2,0:2:6.01:63,6,0	1/1:1,0:1:2.99:24,3,0	1/1:1,0:1:3.01:79,3,0	./.	./.	./.	./.	1/1:0,0:1:3.01:145,3,0	./.	./.	./.	./.	./.	1/1:1,0:1:3:26,3,0	./.	./.	1/1:2,0:2:3:25,3,0	./.	./.	1/1:1,0:1:2.99:23,3,0	./.	1/1:2,0:2:3.01:52,3,0	./.
chr10	54644117	.	C	CTGTG	8030.18	PASS	AB=0.732;AC=45;AF=0.865;AN=52;BaseQRankSum=-1.354;DP=595;FS=2.849;HRun=0;HaplotypeScore=153.3591;InbreedingCoeff=-0.0933;MQ=63.24;MQ0=8;MQRankSum=0.007;QD=14.42;ReadPosRankSum=-0.329;VQSLOD=4.4919;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:21,13:38:5.58:536,0,6	1/1:1,0:6:6.01:61,6,0	./.	./.	0/1:14,12:26:19.24:268,0,19	0/1:7,9:18:50.39:228,0,50	1/1:9,10:25:11.90:260,12,0	0/1:33,0:32:8.40:443,0,8	1/1:5,14:24:27.08:561,27,0	1/1:10,10:21:30:430,30,0	0/1:12,9:25:52.22:276,0,52	1/1:5,14:22:30.10:635,30,0	1/1:8,12:21:12.04:286,12,0	1/1:7,5:16:24.07:490,24,0	1/1:10,8:22:21.07:428,21,0	1/1:6,0:18:26.09:261,26,0	1/1:12,1:20:5.91:104,6,0	1/1:15,2:24:18.06:350,18,0	1/1:16,0:14:3:25,3,0	1/1:20,0:20:8.95:118,9,0	0/1:15,0:17:1.14:1,0,1	1/1:7,4:13:8.96:203,9,0	0/1:8,9:18:9.77:291,0,10	1/1:15,7:23:20.53:421,21,0	1/1:12,9:22:11.48:286,11,0	1/1:16,6:27:10.91:600,11,0	1/1:25,0:25:24.08:367,24,0	1/1:6,1:12:5.74:103,6,0
chr10	54644614	.	T	TAAAAATAC	40055.52	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-1.554;DP=544;FS=6.584;HRun=0;HaplotypeScore=128.1174;InbreedingCoeff=0.9117;MQ=74.76;MQ0=0;MQRankSum=-8.653;QD=78.54;ReadPosRankSum=4.665;VQSLOD=4.9179;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,18:25:33.11:1433,33,0	1/1:1,12:13:27.09:1192,27,0	0/0:22,0:22:47.20:0,47,982	0/0:12,0:12:29.26:0,29,620	1/1:8,28:40:75.26:2973,75,0	1/1:3,21:26:60.21:2564,60,0	1/1:4,9:14:21.07:887,21,0	1/1:11,16:29:75.19:2386,75,0	1/1:6,14:21:42.14:1674,42,0	1/1:4,12:18:48.10:1739,48,0	1/1:1,17:21:48.04:1773,48,0	1/1:3,15:19:39.13:1679,39,0	1/1:2,10:15:23.97:880,24,0	1/1:4,10:17:24.08:966,24,0	1/1:4,14:19:42.14:1726,42,0	1/1:4,12:16:27.09:1160,27,0	1/1:3,10:17:24.08:1021,24,0	1/1:2,9:11:18.06:791,18,0	1/1:4,7:15:42.09:1226,42,0	1/1:7,17:25:60.17:1979,60,0	1/1:6,5:13:9.03:395,9,0	1/1:4,9:15:33.07:1087,33,0	1/1:7,17:26:48.16:1802,48,0	1/1:0,5:6:6.02:263,6,0	1/1:6,21:29:63.22:2618,63,0	1/1:4,22:27:69.24:2715,69,0	1/1:3,14:22:48.64:2110,49,0	1/1:2,9:11:27.09:1016,27,0
chr10	54645061	.	CTGTGTA	C	5070.71	PASS	AB=0.559;AC=45;AF=0.833;AN=54;BaseQRankSum=0.404;DP=522;FS=2.328;HRun=0;HaplotypeScore=114.3591;InbreedingCoeff=0.7966;MQ=73.36;MQ0=8;MQRankSum=-4.181;QD=12.52;ReadPosRankSum=4.940;VQSLOD=3.6293;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:34,0:34:41.34:311,41,0	0/0:6,0:6:2.57:0,3,38	0/0:41,0:29:35.31:0,35,448	0/0:40,0:27:53.96:0,54,541	1/1:22,1:20:38.93:318,39,0	1/1:10,0:9:17.57:133,18,0	1/1:22,0:22:11.77:80,12,0	1/1:15,0:13:26.95:224,27,0	1/1:14,0:13:29.86:281,30,0	1/1:21,0:20:44.79:383,45,0	1/1:8,0:8:11.98:98,12,0	1/1:20,0:19:26:335,26,0	1/1:15,0:15:6.84:91,7,0	0/1:4,15:18:0:0,0,0	1/1:8,0:8:20.97:173,21,0	0/0:13,0:12:19.51:0,20,168	1/1:15,0:14:23.85:184,24,0	1/1:15,0:14:38.65:275,39,0	1/1:16,0:14:34.14:275,34,0	1/1:14,0:14:19.98:152,20,0	1/1:37,0:37:40.54:290,41,0	1/1:15,0:15:44.95:374,45,0	1/1:10,0:9:14.94:117,15,0	1/1:24,0:23:33.54:240,34,0	./.	1/1:25,0:24:19.85:458,20,0	1/1:17,0:16:3.19:238,3,0	1/1:8,0:7:6.39:42,6,0
chr10	54645065	.	GTA	G	5217.43	PASS	AC=44;AF=0.846;AN=52;BaseQRankSum=0.101;DP=492;FS=0.677;HRun=0;HaplotypeScore=82.5534;InbreedingCoeff=0.9131;MQ=68.47;MQ0=13;MQRankSum=-4.381;QD=14.33;ReadPosRankSum=4.488;VQSLOD=4.7173;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:31,1:32:41.22:310,41,0	0/0:5,0:5:8.90:0,9,62	0/0:35,0:23:35.55:0,36,452	0/0:39,0:26:53.96:0,54,541	1/1:21,0:18:38.93:318,39,0	1/1:9,1:9:17.41:132,17,0	1/1:2,18:20:11.66:85,12,0	1/1:14,0:12:26.95:224,27,0	1/1:13,1:13:29.77:244,30,0	1/1:18,0:16:44.79:382,45,0	1/1:7,1:8:11.98:98,12,0	1/1:17,3:19:37.74:362,38,0	1/1:1,12:13:6.87:91,7,0	./.	1/1:7,0:7:20.97:173,21,0	0/0:14,0:13:19.51:0,20,168	1/1:13,0:12:23.85:184,24,0	1/1:14,0:13:38.65:275,39,0	1/1:17,0:13:34.45:276,34,0	1/1:12,0:12:20.87:163,21,0	1/1:40,0:38:41.81:321,42,0	1/1:15,0:15:44.95:374,45,0	1/1:9,0:8:14.94:117,15,0	1/1:18,5:22:31.82:237,32,0	./.	1/1:22,0:21:38.19:498,38,0	1/1:16,0:15:26.11:287,26,0	1/1:6,0:5:8.91:66,9,0
chr10	54645151	.	GTC	G	1462	PASS	AB=1.000;AC=24;AF=0.429;AN=56;BaseQRankSum=8.515;DP=664;FS=3.170;HRun=0;HaplotypeScore=196.8496;InbreedingCoeff=0.7642;MQ=49.99;MQ0=35;MQRankSum=-2.928;QD=5.64;ReadPosRankSum=2.630;VQSLOD=2.7872;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:31,0:30:12.72:151,13,0	0/0:9,0:9:27.09:0,27,518	0/0:59,0:11:13.05:0,13,396	0/0:91,0:30:45.71:0,46,634	0/0:13,0:11:15.05:0,15,275	0/0:23,0:22:35.90:0,36,615	0/0:29,0:29:25.50:0,25,466	0/0:27,0:25:61.09:0,61,942	0/0:16,0:16:22.15:0,22,675	0/0:26,0:24:59.60:0,60,1108	0/0:10,0:10:6.02:0,6,116	1/1:23,1:24:11.09:141,11,0	1/1:17,1:18:26.63:223,27,0	0/0:24,0:22:46.75:0,47,784	0/0:12,0:12:23.98:0,24,442	0/0:22,0:22:51.17:0,51,933	1/1:17,0:17:25.97:198,26,0	1/1:16,1:17:37.81:251,38,0	0/1:24,0:22:80.49:134,0,80	1/1:14,0:12:0.95:67,1,0	1/1:47,0:41:33.91:165,34,0	1/1:16,0:15:11.96:65,12,0	1/1:11,0:11:4.88:33,5,0	1/1:19,1:20:3.49:60,3,0	0/0:25,0:25:41.95:0,42,787	0/0:19,0:16:45.03:0,45,709	1/1:15,0:15:21.07:176,21,0	0/1:5,0:5:3.66:4,0,52
chr10	54645153	.	CTG	C	3947.54	PASS	AB=0.568;AC=23;AF=0.411;AN=56;BaseQRankSum=5.696;DP=674;FS=3.263;HRun=0;HaplotypeScore=187.0193;InbreedingCoeff=0.8732;MQ=50.05;MQ0=37;MQRankSum=-5.205;QD=15.60;ReadPosRankSum=1.873;VQSLOD=3.4435;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,25:31:29.75:364,30,0	0/0:9,0:9:27.09:0,27,452	0/0:62,1:11:18.06:0,18,296	0/0:90,0:31:27.46:0,27,469	0/0:14,0:12:18.05:0,18,276	0/0:23,1:23:35.97:0,36,572	0/0:30,0:30:28.49:0,28,426	0/0:27,1:27:15.86:0,16,692	0/0:16,0:16:36.12:0,36,598	0/0:27,0:25:71.05:0,71,1106	0/0:10,0:10:6.02:0,6,100	1/1:4,18:23:27.26:303,27,0	1/1:6,12:18:32.96:377,33,0	0/0:25,0:23:51.05:0,51,778	0/0:12,0:12:24.06:0,24,375	0/0:21,0:21:51.17:0,51,851	1/1:2,15:17:39.06:472,39,0	1/1:3,14:17:42.06:502,42,0	1/1:8,15:21:42.12:518,42,0	1/1:4,10:12:18.06:229,18,0	1/1:25,21:41:36.26:458,36,0	1/1:6,8:13:12.51:149,13,0	1/1:3,9:12:5.13:75,5,0	0/1:5,16:21:16.39:126,0,16	0/0:25,0:25:41.95:0,42,698	0/0:19,0:16:36.12:0,36,601	1/1:7,8:15:33.43:373,33,0	0/0:6,0:6:6.89:0,7,76
chr10	54645181	.	A	AGT	5342.35	PASS	AB=0.839;AC=35;AF=0.625;AN=56;BaseQRankSum=-4.041;DP=797;FS=16.848;HRun=0;HaplotypeScore=174.4200;InbreedingCoeff=0.0893;MQ=46.55;MQ0=62;MQRankSum=0.062;QD=8.36;ReadPosRankSum=-2.952;VQSLOD=2.9861;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:35,0:37:3.92:82,0,4	0/0:6,0:6:12.04:0,12,143	0/0:93,0:4:5.97:0,6,55	0/1:106,0:17:16.09:16,0,28	0/1:7,6:14:24.35:131,0,24	1/1:6,15:21:23.10:470,23,0	0/1:10,19:28:11.77:253,0,12	1/1:10,16:25:9.82:425,10,0	0/1:11,6:17:1.61:433,0,2	1/1:20,7:27:56.10:727,56,0	1/1:2,9:11:8.93:144,9,0	1/1:22,0:28:20.88:192,21,0	1/1:27,0:27:7.35:306,7,0	0/1:12,19:30:25.51:674,0,26	0/1:8,12:20:99:208,0,111	0/0:20,0:22:53.17:0,53,559	0/1:17,0:22:10.84:11,0,67	1/1:23,0:24:12.11:181,12,0	0/1:24,0:20:10.32:10,0,125	0/0:17,0:15:12.92:0,13,145	0/1:53,0:53:14.74:15,0,252	1/1:16,0:15:6.29:63,6,0	1/1:14,0:16:2.99:24,3,0	0/1:28,1:33:12.53:63,0,13	1/1:9,18:27:26.42:395,26,0	1/1:3,15:17:3.11:480,3,0	0/0:20,0:20:6.67:0,7,240	1/1:5,0:5:3.01:39,3,0
chr10	54645195	.	T	TGTGC	2791.19	PASS	AB=0.827;AC=15;AF=0.268;AN=56;BaseQRankSum=4.325;DP=815;FS=1.668;HRun=0;HaplotypeScore=181.3627;InbreedingCoeff=0.1347;MQ=45.19;MQ0=49;MQRankSum=0.514;QD=9.00;ReadPosRankSum=8.268;VQSLOD=2.3708;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:19,19:39:17.26:310,0,17	0/0:4,0:4:12.04:0,12,227	0/0:91,0:8:20.94:0,21,220	0/0:101,0:18:27.23:0,27,243	0/0:10,0:10:1.93:0,2,75	0/1:21,0:21:2.84:3,0,89	0/0:30,0:29:16.76:0,17,201	0/0:27,0:25:34.25:0,34,321	0/0:20,0:19:7.38:0,7,176	0/1:26,0:26:99:223,0,107	0/1:12,0:12:1.59:2,0,19	1/1:19,16:34:9.09:498,9,0	0/1:9,16:27:5.98:873,0,6	0/0:32,0:31:10.67:0,11,311	0/0:20,0:20:13.13:0,13,268	0/0:22,0:22:48.90:0,49,925	0/1:23,2:25:77.49:285,0,77	1/1:10,14:27:5.38:484,5,0	0/0:21,0:17:7.39:0,7,429	0/0:16,0:16:26.16:0,26,319	0/0:59,0:56:52.41:0,52,732	0/1:7,8:16:14.05:106,0,14	1/1:7,6:16:2.90:80,3,0	0/1:15,23:40:20.36:77,0,20	0/1:25,0:25:1.65:2,0,66	0/0:23,0:23:11.47:0,11,177	0/0:20,0:20:43.02:0,43,621	0/0:8,0:8:11.16:0,11,71
chr10	54645197	.	T	TGC	2700.05	PASS	AB=0.989;AC=23;AF=0.411;AN=56;BaseQRankSum=4.408;DP=818;FS=5.615;HRun=0;HaplotypeScore=164.7678;InbreedingCoeff=-0.3428;MQ=44.65;MQ0=46;MQRankSum=0.677;QD=5.53;ReadPosRankSum=8.065;VQSLOD=1.9769;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:36,2:38:20.80:121,0,21	0/0:4,0:4:12.04:0,12,183	0/0:89,0:8:21.85:0,22,209	0/0:98,0:18:27.88:0,28,250	0/1:10,0:10:53.99:54,0,56	0/1:20,0:20:52.19:198,0,52	0/1:32,0:31:82.78:83,0,215	0/1:28,0:26:99:107,0,204	0/1:21,0:20:99:178,0,109	0/1:29,0:29:58.10:281,0,58	0/1:13,0:13:29.62:54,0,30	0/1:32,2:33:28.74:238,0,29	1/1:27,0:27:2.68:375,3,0	0/1:32,0:31:99:267,0,184	0/1:21,0:21:77.33:77,0,198	0/0:22,0:22:48.75:0,49,756	0/1:26,0:26:97.54:98,0,164	1/1:28,0:28:1.39:253,1,0	0/0:20,0:16:28.02:0,28,343	0/0:16,0:16:19.70:0,20,236	0/0:59,0:57:48.17:0,48,534	0/1:14,1:15:37.09:78,0,37	1/1:17,0:16:2.90:33,3,0	0/1:39,1:40:34.69:47,0,35	0/1:25,0:25:29.83:155,0,30	0/1:24,0:24:99:161,0,126	0/0:21,0:21:42.80:0,43,480	0/1:8,0:8:2.68:3,0,55
chr10	54645201	.	C	CGT	2729.36	PASS	AB=0.932;AC=26;AF=0.464;AN=56;BaseQRankSum=3.639;DP=800;FS=48.045;HRun=0;HaplotypeScore=160.7102;InbreedingCoeff=0.2754;MQ=46.59;MQ0=36;MQRankSum=0.879;QD=5.84;ReadPosRankSum=4.472;VQSLOD=1.0932;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:35,0:35:11.97:98,12,0	0/0:5,0:5:12.01:0,12,130	0/0:81,0:13:3.67:0,4,216	0/0:89,0:19:13.89:0,14,125	0/0:12,0:12:1.93:0,2,66	0/1:20,1:21:19.80:20,0,105	0/0:31,0:30:23.50:0,24,277	0/0:25,0:23:20.16:0,20,195	0/1:22,0:21:20.45:20,0,121	1/1:6,18:28:66.09:739,66,0	0/0:12,0:12:3.64:0,4,38	1/1:34,0:33:26.98:218,27,0	1/1:28,0:28:41.90:374,42,0	0/1:32,0:33:37.75:38,0,227	0/0:20,0:21:1.36:0,1,174	0/0:21,0:22:32.72:0,33,348	0/1:26,0:26:19.73:20,0,54	1/1:27,0:27:19.37:169,19,0	1/1:16,3:16:23.37:279,23,0	0/1:14,3:17:48.45:195,0,48	0/1:28,32:58:13.08:311,0,13	1/1:15,0:15:6.29:64,6,0	1/1:20,0:19:5.99:48,6,0	0/1:38,0:38:14.28:20,0,14	0/1:22,0:22:11.30:11,0,100	0/0:23,0:23:5.03:0,5,227	1/1:10,12:22:19.88:294,20,0	0/0:9,0:9:10.47:0,10,109
chr10	54645448	.	C	CGTTGTTGTT	41903.95	PASS	AB=0.709;AC=45;AF=0.833;AN=54;BaseQRankSum=-5.996;DP=796;FS=9.338;HRun=0;HaplotypeScore=170.7921;InbreedingCoeff=0.8638;MQ=56.89;MQ0=1;MQRankSum=-7.611;QD=60.29;ReadPosRankSum=-1.472;VQSLOD=3.8113;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:23,30:55:84.29:3521,84,0	0/0:10,0:10:27.09:0,27,697	0/0:34,0:29:63.65:0,64,1223	0/0:38,0:33:78.10:0,78,1716	1/1:0,10:11:21.03:667,21,0	1/1:6,10:19:27.09:1262,27,0	1/1:15,13:29:42.11:1677,42,0	1/1:53,0:51:99:3272,111,0	0/1:23,16:38:74.16:3487,0,74	1/1:16,20:36:81.26:2661,81,0	1/1:5,10:18:35.99:925,36,0	1/1:8,23:34:54.19:2316,54,0	1/1:10,23:33:57.02:2418,57,0	1/1:12,21:34:33.11:1415,33,0	1/1:4,21:29:57.20:2593,57,0	0/0:18,0:18:42.14:0,42,1205	1/1:14,16:32:42.14:1731,42,0	1/1:7,14:23:27.56:1139,28,0	1/1:12,11:26:60.20:1947,60,0	1/1:2,14:24:42.11:1373,42,0	1/1:12,20:34:36.12:1476,36,0	1/1:3,13:18:23.97:801,24,0	1/1:7,10:22:27.09:1013,27,0	1/1:12,16:33:39.13:1318,39,0	1/1:10,15:27:27.09:1128,27,0	1/1:17,18:36:69.09:1941,69,0	1/1:6,17:26:39.61:1823,40,0	./.
chr10	54645460	.	T	TG	4006.70	PASS	AB=0.978;AC=23;AF=0.411;AN=56;BaseQRankSum=17.029;DP=721;FS=5.232;HRun=0;HaplotypeScore=164.5913;InbreedingCoeff=-0.7066;MQ=49.03;MQ0=1;MQRankSum=-9.570;QD=6.55;ReadPosRankSum=10.897;VQSLOD=2.1045;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:48,0:47:99:326,0,712	0/0:10,0:10:30.10:0,30,419	0/0:35,0:27:78.23:0,78,1043	0/0:40,0:35:99:0,102,1346	0/1:14,0:14:99:136,0,131	0/1:17,0:17:69.57:70,0,123	0/1:25,0:25:99:129,0,397	0/1:24,18:40:99:886,0,500	0/1:30,8:37:99:553,0,272	0/1:30,0:28:99:206,0,462	0/1:19,0:19:99:124,0,204	0/1:35,0:35:86.01:86,0,317	0/1:31,0:31:99:113,0,349	0/1:32,0:32:41.28:41,0,524	0/1:31,0:31:99:227,0,147	0/0:22,0:22:66.22:0,66,921	0/1:25,0:25:27.06:27,0,361	0/1:24,0:24:74.99:75,0,364	0/1:21,0:21:99:226,0,277	0/1:23,0:23:99:125,0,161	0/1:22,1:23:99:134,0,282	0/1:14,0:14:30.73:31,0,142	0/1:21,0:20:77.58:78,0,328	0/1:27,0:27:54.61:55,0,133	0/1:22,0:22:19.28:19,0,272	0/1:24,0:24:99:224,0,398	0/1:26,0:26:99:117,0,279	0/0:2,0:2:6.02:0,6,84
chr10	54645633	.	GGAGA	G	12994.47	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=15.483;DP=753;FS=6.464;HRun=0;HaplotypeScore=132.5448;InbreedingCoeff=0.9756;MQ=78.28;MQ0=1;MQRankSum=-4.344;QD=46.24;ReadPosRankSum=1.718;VQSLOD=5.5683;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,135,3538	0/0:17,0:17:48.16:0,48,1232	0/0:27,0:27:66.70:0,67,1677	0/0:23,0:23:50.04:0,50,1107	1/1:2,22:24:51.05:868,51,0	1/1:0,17:17:42.14:800,42,0	1/1:1,24:25:51.17:988,51,0	1/1:1,44:45:99:2198,129,0	1/1:0,30:30:81.28:1557,81,0	1/1:2,19:21:57.20:1103,57,0	1/1:0,18:18:48.07:846,48,0	0/0:32,0:32:93.32:0,93,2386	0/0:29,0:29:87.30:0,87,2252	1/1:0,19:19:51.17:982,51,0	1/1:0,30:30:66.23:1248,66,0	0/0:30,0:30:87.30:0,87,2349	0/0:39,0:37:99:0,105,2622	0/0:25,0:25:75.23:0,75,1962	0/0:21,0:21:63.14:0,63,1418	0/0:23,0:23:63.22:0,63,1637	0/0:39,0:39:99:0,114,2918	0/0:23,0:23:63.20:0,63,1632	0/0:24,0:24:66.22:0,66,1689	0/0:39,0:39:99:0,102,2708	1/1:1,18:19:39.13:756,39,0	1/1:0,32:30:87.23:1591,87,0	0/0:32,0:32:93.31:0,93,2437	1/1:0,1:1:3.01:58,3,0
chr10	54646496	.	GGA	G	14884.78	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-6.633;DP=466;FS=2.994;HRun=0;HaplotypeScore=65.2426;InbreedingCoeff=0.9309;MQ=89.27;MQ0=0;MQRankSum=-9.952;QD=35.61;ReadPosRankSum=6.616;VQSLOD=6.8243;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,35:36:99:1399,105,0	1/1:1,16:17:48.16:649,48,0	0/0:21,0:21:51.78:0,52,802	0/0:27,0:26:64.74:0,65,1028	1/1:0,8:8:24.08:325,24,0	1/1:0,11:11:30.10:406,30,0	1/1:3,18:21:54.18:731,54,0	1/1:2,17:19:51.17:690,51,0	1/1:0,13:13:33.11:446,33,0	1/1:0,17:17:51.16:675,51,0	1/1:1,6:7:15.05:203,15,0	1/1:0,14:14:39.13:528,39,0	1/1:0,11:11:27.09:365,27,0	1/1:1,10:11:27.09:362,27,0	1/1:1,13:14:36.12:487,36,0	1/1:0,14:14:38.90:528,39,0	1/1:1,31:32:87.29:1177,87,0	1/1:1,18:19:51.17:690,51,0	1/1:2,19:21:57.19:771,57,0	1/1:4,11:15:33.11:446,33,0	1/1:4,23:27:63.21:853,63,0	1/1:1,11:12:30.10:406,30,0	1/1:0,6:6:15.05:203,15,0	1/1:1,25:26:72.24:974,72,0	1/1:1,11:12:33.11:437,33,0	1/1:2,12:14:33.07:411,33,0	1/1:1,16:17:48.16:644,48,0	1/1:1,3:3:6.02:81,6,0
chr10	54646581	.	CT	C	286.32	PASS	AB=0.892;AC=5;AF=0.089;AN=56;BaseQRankSum=-0.249;DP=400;FS=2.032;HRun=3;HaplotypeScore=97.4455;InbreedingCoeff=0.2470;MQ=85.70;MQ0=1;MQRankSum=-1.708;QD=5.21;ReadPosRankSum=-0.924;VQSLOD=0.1369;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:64.05:0,64,357	0/0:7,0:7:18.05:0,18,243	0/0:17,0:15:38.95:0,39,473	0/0:21,0:20:53.31:0,53,619	0/0:14,0:14:34.04:0,34,360	0/0:7,0:7:21.06:0,21,283	0/0:13,0:13:39.04:0,39,476	0/0:23,0:23:51.08:0,51,600	0/0:8,0:8:21:0,21,240	0/0:9,0:9:18.06:0,18,245	0/0:15,0:15:22.53:0,23,257	0/0:10,0:10:18.84:0,19,109	0/0:9,0:9:16.87:0,17,93	0/0:11,0:11:32.95:0,33,394	0/0:8,0:8:18:0,18,202	0/0:24,0:24:68.45:0,68,828	0/0:21,0:21:40.61:0,41,168	0/0:18,0:18:37.54:0,38,242	1/1:14,0:14:3.65:90,4,0	0/1:18,1:19:23.18:108,0,23	0/1:14,0:14:13.12:122,0,13	0/0:9,0:9:21.79:0,22,156	0/0:12,0:12:30.28:0,30,228	0/0:20,0:20:15.24:0,15,74	0/0:11,0:11:31.63:0,32,398	0/0:17,0:17:47.97:0,48,553	0/1:5,3:8:17.32:80,0,17	0/0:16,0:15:38.20:0,38,435
chr10	54646586	.	AAG	A	2154.51	PASS	AB=0.997;AC=31;AF=0.554;AN=56;BaseQRankSum=-1.579;DP=410;FS=2.101;HRun=0;HaplotypeScore=97.1610;InbreedingCoeff=-0.0695;MQ=84.41;MQ0=1;MQRankSum=-2.077;QD=6.34;ReadPosRankSum=-2.041;VQSLOD=2.8087;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:26,1:27:57.10:429,57,0	0/1:7,0:7:4.39:4,0,43	0/0:18,0:16:26.85:0,27,385	0/0:19,0:18:48.67:0,49,491	0/1:16,0:16:85.23:85,0,94	0/0:8,0:8:3.81:0,4,75	0/0:13,0:13:2.56:0,3,116	0/1:18,1:19:24.89:25,0,195	0/1:8,0:8:12.43:12,0,43	0/1:9,0:9:8.76:9,0,69	0/1:16,0:16:9.29:9,0,121	1/1:10,1:11:13.68:144,14,0	1/1:10,0:10:18.74:82,19,0	0/1:11,0:11:15.62:16,0,96	0/1:8,0:8:33.27:33,0,40	0/1:22,0:22:3.61:4,0,113	1/1:19,2:21:52.55:304,53,0	1/1:19,1:20:34.57:311,35,0	0/1:10,0:10:5.95:95,0,6	0/1:21,0:21:70.67:71,0,98	0/1:16,0:16:47.11:47,0,94	1/1:8,1:9:11.05:174,11,0	1/1:12,1:13:13.29:149,13,0	1/1:19,0:19:39.98:173,40,0	0/0:12,0:12:8.31:0,8,99	0/1:21,0:21:99:109,0,102	0/1:10,0:10:31.37:31,0,67	0/1:16,0:15:12.11:12,0,89
chr10	54646587	.	AG	A	6289.91	PASS	AB=0.970;AC=49;AF=0.875;AN=56;BaseQRankSum=-3.595;DP=410;FS=42.686;HRun=1;HaplotypeScore=78.4022;InbreedingCoeff=0.4452;MQ=85.32;MQ0=1;MQRankSum=-3.191;QD=16.91;ReadPosRankSum=-1.436;VQSLOD=2.3904;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,13:27:77.78:941,78,0	1/1:7,0:7:6.38:68,6,0	0/0:19,0:17:27.85:0,28,382	0/0:19,0:18:42.84:0,43,398	1/1:16,1:17:17.05:210,17,0	1/1:8,0:8:3.60:56,4,0	1/1:14,0:14:1.02:61,1,0	0/1:19,0:19:6.70:66,0,7	1/1:7,0:7:7.09:53,7,0	1/1:10,0:10:6.32:80,6,0	1/1:16,0:16:23.29:128,23,0	1/1:7,4:11:26.76:313,27,0	1/1:4,6:10:24.06:302,24,0	0/1:9,1:10:0.85:35,0,1	1/1:8,0:8:10.18:82,10,0	1/1:18,3:21:23.36:193,23,0	1/1:5,16:21:57.16:749,57,0	1/1:11,9:20:51.05:643,51,0	1/1:9,0:9:16.03:158,16,0	1/1:22,0:22:24.34:225,24,0	1/1:16,0:16:20.49:158,20,0	1/1:6,3:9:23.64:267,24,0	1/1:8,5:13:29.66:362,30,0	1/1:0,19:19:44.18:583,44,0	0/1:12,0:12:3.67:62,0,4	1/1:20,0:20:28.64:233,29,0	1/1:9,1:10:11.03:115,11,0	1/1:15,1:15:11.01:147,11,0
chr10	54647366	.	ATG	A	8596.84	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-14.933;DP=931;FS=3.677;HRun=0;HaplotypeScore=159.3350;InbreedingCoeff=0.9794;MQ=60.57;MQ0=9;MQRankSum=0.041;QD=22.39;ReadPosRankSum=0.383;VQSLOD=5.4462;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:54:82.17:0,82,716	0/0:9,0:14:18.01:0,18,177	0/0:37,0:23:35.82:0,36,460	0/0:38,0:27:36.12:0,36,565	1/1:8,24:32:47.98:547,48,0	1/1:6,19:25:45.14:533,45,0	1/1:10,20:30:41.82:476,42,0	1/1:14,25:39:65.09:803,65,0	1/1:5,32:36:87.26:1025,87,0	1/1:14,32:47:96.08:1090,96,0	1/1:5,14:19:35.94:405,36,0	0/0:7,0:31:51:0,51,468	0/0:9,0:36:74.96:0,75,676	1/1:5,28:33:66.20:782,66,0	1/1:12,35:46:87.04:1030,87,0	0/0:4,0:34:65.98:0,66,578	0/0:5,0:22:38.79:0,39,346	0/0:10,0:22:5.73:0,6,213	0/0:15,0:26:34.57:0,35,317	0/0:11,0:35:49.25:0,49,414	0/0:22,0:70:86.98:0,87,762	0/0:13,1:31:12.50:0,12,416	0/0:9,0:26:44.99:0,45,393	0/0:11,0:37:68.99:0,69,606	1/1:4,13:17:30.09:355,30,0	1/1:7,35:42:99:1195,102,0	0/0:8,0:30:43.53:0,44,389	1/1:5,11:16:30.09:355,30,0
chr10	54648150	.	CTGTCTCTGTCTGTCTT	C	33666.07	PASS	AB=0.542;AC=43;AF=0.768;AN=56;BaseQRankSum=15.586;DP=786;FS=2.911;HRun=0;HaplotypeScore=324.4031;InbreedingCoeff=0.8447;MQ=66.65;MQ0=2;MQRankSum=-13.518;QD=61.89;ReadPosRankSum=5.427;VQSLOD=4.0064;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:3,40:43:39.05:1634,39,0	1/1:1,9:10:15.05:688,15,0	0/0:51,0:40:93.51:0,94,4029	0/0:55,0:51:66.83:0,67,4732	1/1:1,27:28:33.03:1071,33,0	1/1:2,28:30:57.20:2574,57,0	1/1:2,13:15:3.01:137,3,0	1/1:8,23:31:68.80:1088,69,0	1/1:3,16:19:30.10:1375,30,0	1/1:7,34:41:95.94:3225,96,0	1/1:3,16:19:20.99:787,21,0	1/1:1,23:24:36.59:1644,37,0	1/1:2,23:25:45.15:2055,45,0	1/1:0,18:18:33.11:1485,33,0	1/1:2,28:30:52.33:2326,52,0	1/1:3,46:49:99:4669,105,0	1/1:4,17:21:8.95:273,9,0	0/1:2,11:13:12.03:1183,0,12	0/0:34,0:34:81.27:0,81,4877	0/0:29,0:29:81.28:0,81,5453	0/0:35,0:35:96.31:0,96,6828	1/1:1,24:25:45.15:1861,45,0	1/1:4,21:25:22.01:930,22,0	1/1:3,20:23:8.12:412,8,0	1/1:4,20:24:33.11:1480,33,0	1/1:3,22:25:66.08:2082,66,0	0/0:37,0:37:99:0,105,6589	1/1:0,6:6:15.05:688,15,0
chr10	54648839	.	TATAGATAGATAG	T	3448.43	PASS	AB=0.813;AC=26;AF=0.591;AN=44;BaseQRankSum=-1.846;DP=392;FS=0.000;HRun=0;HaplotypeScore=156.8950;InbreedingCoeff=0.7125;MQ=63.18;MQ0=7;MQRankSum=-4.317;QD=15.46;ReadPosRankSum=1.174;VQSLOD=2.2227;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:30.10:0,30,1536	0/0:12,0:12:18.06:0,18,515	./.	./.	1/1:10,0:23:1.55:4,2,0	1/1:18,11:29:9.03:201,9,0	0/1:6,0:6:0:0,0,0	./.	1/1:1,0:8:1.55:4,2,0	1/1:14,0:14:18.06:413,18,0	1/1:12,0:12:6.02:105,6,0	./.	0/1:6,0:15:3.26:3,0,109	./.	1/1:2,7:9:6.02:190,6,0	0/0:8,0:8:15.05:0,15,521	0/0:7,0:20:30.09:0,30,572	0/0:7,0:19:27.07:0,27,572	1/1:9,7:16:21.05:468,21,0	1/1:7,9:16:12.04:411,12,0	./.	0/0:2,0:2:3.01:0,3,141	0/0:1,0:6:15.05:0,15,286	0/0:2,0:6:6.02:0,6,68	1/1:16,11:27:9.03:308,9,0	1/1:9,7:16:21.62:588,22,0	1/1:14,8:22:15.05:458,15,0	1/1:5,5:10:9.03:296,9,0
chr10	54648841	.	TAG	T	133.02	PASS	AB=0.943;AC=11;AF=0.196;AN=56;BaseQRankSum=10.254;DP=378;FS=0.541;HRun=0;HaplotypeScore=109.4316;InbreedingCoeff=-0.0984;MQ=63.35;MQ0=7;MQRankSum=-3.327;QD=0.94;ReadPosRankSum=2.469;VQSLOD=2.0236;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:51.15:0,51,818	0/0:13,0:13:38.10:0,38,470	0/0:11,0:9:14.92:0,15,198	0/0:19,0:7:11.67:0,12,87	0/0:23,0:23:22.09:0,22,308	0/1:26,1:27:2.42:2,0,471	0/0:4,2:6:0.13:0,0,37	0/0:21,0:19:54.16:0,54,694	0/0:8,0:8:0.84:0,1,37	0/1:11,2:13:72.34:72,0,275	0/1:8,2:10:12.80:13,0,141	0/0:13,0:13:12.04:0,12,164	0/0:15,0:15:12.87:0,13,202	0/0:3,2:5:6.02:0,6,82	0/0:9,0:9:5.99:0,6,88	0/0:7,0:7:18.06:0,18,272	0/1:20,0:20:16.58:17,0,173	0/1:19,0:19:21.93:22,0,211	0/0:15,0:15:5.58:0,6,304	0/1:14,2:16:1.92:2,0,107	0/0:5,0:5:6.02:0,6,82	0/0:2,0:2:6.02:0,6,99	1/1:6,0:6:10.22:38,10,0	0/1:6,0:6:13.24:13,0,71	0/0:24,2:26:21.99:0,22,378	0/1:14,1:15:44.26:44,0,238	0/0:18,2:20:4.75:0,5,357	0/1:10,0:10:45.89:46,0,181
chr10	54648849	.	TAG	T	436.87	PASS	AB=0.929;AC=15;AF=0.268;AN=56;BaseQRankSum=9.509;DP=350;FS=2.613;HRun=0;HaplotypeScore=103.2229;InbreedingCoeff=-0.2398;MQ=59.74;MQ0=8;MQRankSum=-3.553;QD=2.34;ReadPosRankSum=4.243;VQSLOD=1.7907;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:54.14:0,54,867	0/0:11,0:11:33.11:0,33,521	0/0:7,0:7:12.04:0,12,168	0/0:17,0:4:9.03:0,9,111	0/0:21,0:21:10.05:0,10,173	0/1:24,1:25:41.22:41,0,412	0/1:5,2:7:35.27:40,0,35	0/0:15,0:14:15.20:0,15,529	0/1:8,0:8:1.34:1,0,38	0/1:11,2:13:96.21:96,0,277	0/1:9,2:11:13.01:13,0,124	0/0:12,0:12:9.03:0,9,129	0/0:14,0:14:7.66:0,8,164	0/0:3,2:5:6.01:0,6,68	0/1:8,0:8:3.82:4,0,22	0/0:9,0:9:24.08:0,24,384	0/1:18,0:18:5.12:5,0,148	0/0:20,0:20:1.95:0,2,230	0/1:14,0:14:99:123,0,307	0/1:12,2:14:27.59:28,0,68	0/0:5,0:5:6.02:0,6,86	0/0:2,0:2:6.02:0,6,101	1/1:6,0:6:5.46:13,5,0	0/0:6,0:6:3.46:0,3,81	0/1:21,2:23:4.15:4,0,271	0/1:13,1:14:92.96:93,0,203	0/1:15,2:17:53.63:54,0,264	0/1:9,0:9:64.49:64,0,148
chr10	54648883	.	GAT	G	614	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.053;DP=403;FS=20.172;HRun=0;HaplotypeScore=115.8902;InbreedingCoeff=0.6325;MQ=66.34;MQ0=7;MQRankSum=-4.257;QD=32.32;ReadPosRankSum=7.071;VQSLOD=3.7834;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:60.19:0,60,975	1/1:0,8:8:24.08:366,24,0	0/0:10,0:6:18.06:0,18,255	0/0:15,0:12:34:0,34,466	0/0:18,0:18:8.63:0,9,166	0/0:23,0:23:32.27:0,32,499	0/0:7,0:7:8.76:0,9,126	0/0:22,0:21:63.17:0,63,879	0/0:12,0:12:11.46:0,11,209	0/0:14,0:14:39.03:0,39,475	0/0:10,0:10:9.03:0,9,130	0/0:11,0:11:9.03:0,9,129	0/0:15,0:15:14.44:0,14,252	0/0:5,0:5:9.03:0,9,129	0/0:13,0:13:16.70:0,17,260	1/1:0,11:10:24.08:366,24,0	0/0:19,0:19:0.73:0,1,214	0/0:20,0:20:5.48:0,5,269	0/0:20,0:19:37.41:0,37,588	0/0:17,0:17:2.71:0,3,234	0/0:9,0:9:18.06:0,18,257	0/0:7,0:7:21.07:0,21,316	0/0:16,0:16:25.34:0,25,456	0/0:8,0:8:9.60:0,10,167	0/0:22,0:22:15.53:0,16,368	0/0:17,0:17:17.98:0,18,421	0/0:18,0:18:14.64:0,15,393	0/0:15,0:15:25.06:0,25,405
chr10	54649089	.	C	CA	341.42	PASS	AB=0.586;AC=3;AF=0.054;AN=56;BaseQRankSum=-2.310;DP=537;FS=5.450;HRun=9;HaplotypeScore=97.9580;InbreedingCoeff=0.5379;MQ=79.82;MQ0=0;MQRankSum=0.973;QD=11.38;ReadPosRankSum=-0.017;VQSLOD=2.9701;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,2:24:20.72:0,21,397	1/1:2,11:13:30.08:332,30,0	0/0:28,0:22:2.50:0,2,131	0/0:21,0:13:13.12:0,13,94	0/0:21,0:21:20.97:0,21,406	0/0:20,0:20:41.96:0,42,361	0/0:20,0:20:50.97:0,51,439	0/0:20,0:20:43.85:0,44,365	0/0:18,0:18:50.95:0,51,433	0/0:17,1:18:14.73:0,15,346	0/0:13,0:14:35.02:0,35,290	0/0:27,0:27:62.95:0,63,540	0/0:18,1:19:11.77:0,12,323	0/0:22,0:22:59.80:0,60,496	0/0:19,0:19:50.98:0,51,440	0/1:5,12:17:18.84:115,0,19	0/0:20,0:20:50.62:0,51,429	0/0:19,1:20:17.73:0,18,368	0/0:19,0:19:50.86:0,51,428	0/0:19,0:19:44.74:0,45,370	0/0:8,0:8:24:0,24,208	0/0:11,0:11:29.99:0,30,260	0/0:14,0:14:41.96:0,42,357	0/0:25,0:25:71.88:0,72,601	0/0:33,0:33:83.91:0,84,715	0/0:17,0:17:45.81:0,46,377	0/0:22,0:22:62.92:0,63,534	0/0:7,0:7:17.99:0,18,156
chr10	54649545	.	ATGTG	A	13653.42	PASS	AB=0.558;AC=35;AF=0.625;AN=56;BaseQRankSum=5.831;DP=767;FS=0.666;HRun=0;HaplotypeScore=288.4141;InbreedingCoeff=0.9190;MQ=56.77;MQ0=1;MQRankSum=-9.326;QD=29.36;ReadPosRankSum=-5.941;VQSLOD=3.1093;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:87.23:0,87,2144	1/1:1,3:4:12.02:176,12,0	0/0:36,0:33:56.18:0,56,1189	0/0:37,0:34:59.89:0,60,1171	1/1:6,20:26:30.40:371,30,0	1/1:4,8:12:23.91:271,24,0	1/1:11,15:26:50.91:608,51,0	1/1:15,38:53:99:1824,107,0	1/1:5,16:21:50.96:700,51,0	1/1:8,18:26:30.43:1072,30,0	1/1:3,18:21:42.01:613,42,0	0/0:34,0:35:81.25:0,81,1898	0/0:33,0:34:81.03:0,81,1878	1/1:4,26:30:77.80:892,78,0	1/1:9,23:32:80.87:1021,81,0	1/1:8,20:28:60:872,60,0	0/0:26,0:26:57.20:0,57,1378	0/0:25,0:25:54.56:0,55,1540	0/1:5,19:24:21.40:782,0,21	1/1:5,23:29:74.81:845,75,0	1/1:9,23:32:44.56:521,45,0	0/0:25,0:25:63.22:0,63,1553	0/0:16,0:16:48.16:0,48,1208	0/0:29,0:29:62.98:0,63,1429	1/1:7,20:27:57.35:647,57,0	1/1:11,23:35:78.25:1287,78,0	1/1:6,18:24:54.05:817,54,0	1/1:8,7:15:22.29:335,22,0
chr10	54649612	.	AGTGTGTGTGTGT	A	6334.62	PASS	AB=0.798;AC=30;AF=0.536;AN=56;BaseQRankSum=0.488;DP=651;FS=13.648;HRun=0;HaplotypeScore=318.2949;InbreedingCoeff=0.0850;MQ=44.00;MQ0=16;MQRankSum=-3.970;QD=14.33;ReadPosRankSum=-0.281;VQSLOD=1.7818;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:28:9.27:0,9,197	0/1:4,0:7:11.40:45,0,11	0/0:40,0:18:12.04:0,12,341	0/0:46,0:22:9.50:0,9,204	0/1:19,13:33:10.32:100,0,10	0/1:10,3:13:36.28:149,0,36	1/1:17,2:19:11.64:264,12,0	0/1:27,0:25:45.71:109,0,46	1/1:19,4:22:21.13:360,21,0	1/1:23,8:32:57.19:1535,57,0	1/1:15,4:21:0.22:0,0,0	0/1:11,0:22:25.42:25,0,141	0/1:7,0:15:6.92:7,0,29	1/1:14,5:19:29.38:427,29,0	1/1:11,8:19:19.36:429,19,0	0/1:16,2:30:31.16:353,0,31	0/1:16,0:18:34.09:34,0,40	0/0:19,0:21:3.45:0,3,223	0/1:17,0:15:33.08:88,0,33	1/1:12,0:17:8.96:98,9,0	0/1:25,0:21:6.43:18,0,6	0/0:16,0:25:13.40:0,13,77	0/0:15,0:22:11.23:0,11,99	0/0:23,0:25:9.15:0,9,97	1/1:19,4:23:27.50:523,28,0	1/1:22,5:27:30.10:866,30,0	0/1:14,0:18:12.57:372,0,13	0/1:7,6:13:43.14:532,0,43
chr10	54650859	.	TTG	T	6997.07	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=13.406;DP=631;FS=4.544;HRun=0;HaplotypeScore=75.1935;InbreedingCoeff=0.9933;MQ=82.55;MQ0=1;MQRankSum=0.108;QD=38.87;ReadPosRankSum=4.540;VQSLOD=7.0732;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,42:44:99:1634,111,0	0/0:6,0:6:18.06:0,18,337	0/0:21,0:21:60.03:0,60,996	0/0:14,0:14:27.58:0,28,504	0/0:28,0:28:81.24:0,81,1436	0/0:21,0:21:57.20:0,57,1067	0/0:34,0:33:93.28:0,93,1653	0/0:17,0:17:51.17:0,51,909	0/0:25,0:25:75.23:0,75,1342	0/0:21,0:21:60.21:0,60,1104	0/0:24,0:24:69.24:0,69,1263	1/1:0,18:18:51.13:727,51,0	1/1:0,22:22:60.20:883,60,0	0/0:22,0:22:57.18:0,57,1029	0/0:25,0:25:75.26:0,75,1377	0/0:30,0:30:90.27:0,90,1583	1/1:2,27:29:72.24:1060,72,0	1/1:0,22:21:63.21:928,63,0	0/0:25,0:25:69.22:0,69,1257	0/0:23,0:23:66.23:0,66,1226	0/0:33,0:33:99:0,99,1779	1/1:0,13:13:33.11:486,33,0	1/1:1,15:16:38.22:572,38,0	1/1:0,16:16:48.16:707,48,0	0/0:27,0:27:78.24:0,78,1416	0/0:22,0:22:66.23:0,66,1214	0/0:29,0:28:84.29:0,84,1524	0/0:4,0:4:12.04:0,12,216
chr10	54656714	.	A	AT	5428.68	PASS	AB=0.706;AC=38;AF=0.679;AN=56;BaseQRankSum=-7.364;DP=562;FS=2.656;HRun=14;HaplotypeScore=89.8321;InbreedingCoeff=0.5852;MQ=69.54;MQ0=0;MQRankSum=-0.900;QD=12.06;ReadPosRankSum=-1.218;VQSLOD=4.3323;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:14,27:41:17.08:362,0,17	0/0:3,0:5:4.97:0,5,25	0/0:14,0:12:13.85:0,14,55	0/1:23,0:20:6.41:6,0,19	1/1:7,13:22:15.48:244,15,0	1/1:4,18:22:30.88:266,31,0	1/1:9,15:25:8.30:283,8,0	1/1:7,25:33:62.90:546,63,0	1/1:4,8:12:21:185,21,0	1/1:9,15:25:38.81:323,39,0	1/1:1,14:16:35.75:290,36,0	1/1:5,9:14:5.90:159,6,0	1/1:5,14:20:18.11:254,18,0	1/1:7,13:20:31.24:267,31,0	0/1:6,12:19:11.70:146,0,12	0/0:4,0:21:29.39:0,29,94	0/1:9,12:22:17:296,0,17	1/1:4,11:15:7.73:192,8,0	0/0:6,0:20:30.06:0,30,106	0/0:3,0:18:28.44:0,28,86	0/0:3,0:12:10.15:0,10,29	1/1:1,17:20:21.67:324,22,0	1/1:3,15:19:36.29:301,36,0	1/1:3,13:16:10.73:218,11,0	1/1:10,19:29:12.17:312,12,0	1/1:10,13:25:15.21:317,15,0	0/0:2,0:19:28.51:0,29,82	1/1:5,7:12:1.73:139,2,0
chr10	54657529	.	A	ATG	11865.94	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-17.387;DP=642;FS=0.000;HRun=0;HaplotypeScore=71.6737;InbreedingCoeff=0.9793;MQ=64.28;MQ0=7;MQRankSum=1.019;QD=37.91;ReadPosRankSum=3.918;VQSLOD=7.0972;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,15:16:33.11:571,33,0	1/1:0,14:14:33.11:571,33,0	0/0:13,0:7:11.98:0,12,151	0/0:16,0:8:8.97:0,9,84	0/0:32,0:32:87.24:0,87,1112	0/0:31,0:31:84.24:0,84,1073	0/0:8,0:8:9.02:0,9,105	0/0:48,0:48:99:0,111,1392	0/0:15,0:15:39.10:0,39,489	0/0:44,0:44:99:0,117,1533	0/0:26,0:26:72.20:0,72,913	1/1:4,13:17:36.12:623,36,0	1/1:0,23:23:54.09:934,54,0	0/0:12,0:12:36.12:0,36,479	0/0:16,0:16:45.13:0,45,584	1/1:0,13:13:36.12:624,36,0	1/1:2,22:24:54.18:934,54,0	1/1:3,23:26:63.22:1079,63,0	1/1:0,25:28:77.68:1232,78,0	1/1:3,40:43:87.30:1506,87,0	1/1:1,19:20:45.15:779,45,0	1/1:1,22:22:48.06:831,48,0	1/1:1,20:20:51.17:883,51,0	1/1:1,11:12:24.08:416,24,0	0/0:29,0:29:75.22:0,75,968	0/0:21,0:21:57.17:0,57,733	1/1:3,27:30:51.17:883,51,0	0/0:18,0:18:54.14:0,54,687
chr10	54658443	.	C	CT	6553.87	PASS	AB=0.652;AC=36;AF=0.643;AN=56;BaseQRankSum=-9.137;DP=621;FS=5.739;HRun=13;HaplotypeScore=69.1823;InbreedingCoeff=0.5233;MQ=65.35;MQ0=0;MQRankSum=-0.209;QD=13.08;ReadPosRankSum=-1.040;VQSLOD=4.7630;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:9,27:38:15.27:384,0,15	0/0:2,0:8:12.21:0,12,36	0/0:19,0:16:23.85:0,24,145	0/0:9,0:8:5.97:0,6,49	1/1:7,23:31:54.15:451,54,0	1/1:10,12:23:25.48:343,25,0	0/1:10,14:24:24.49:192,0,24	1/1:13,21:35:19.93:435,20,0	1/1:4,15:19:36.03:329,36,0	1/1:7,19:27:27.40:413,27,0	1/1:5,19:25:30.22:394,30,0	1/1:0,15:16:23.92:204,24,0	1/1:3,13:16:3.44:171,3,0	1/1:4,7:11:18.90:166,19,0	1/1:7,19:29:46.72:427,47,0	0/0:4,0:26:36.64:0,37,107	1/1:5,24:31:42.16:510,42,0	1/1:2,14:16:24.03:223,24,0	0/1:13,1:16:24.75:25,0,123	0/0:23,1:24:31.54:0,32,358	0/0:9,0:9:23.55:0,24,155	0/1:8,19:28:17.49:373,0,17	1/1:8,16:27:12.16:352,12,0	1/1:2,13:15:30.03:279,30,0	0/1:10,16:27:8.30:204,0,8	1/1:5,18:24:33.26:424,33,0	0/0:21,0:23:20.77:0,21,271	0/1:6,16:23:1.04:256,0,1
chr10	54658537	.	CG	C	3402.94	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=9.976;DP=656;FS=4.729;HRun=1;HaplotypeScore=60.7368;InbreedingCoeff=0.9999;MQ=87.29;MQ0=0;MQRankSum=-2.577;QD=39.57;ReadPosRankSum=-0.963;VQSLOD=3.8250;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,99,1556	0/0:14,0:14:42.14:0,42,671	0/0:31,0:31:90.27:0,90,1409	0/0:14,0:14:39.13:0,39,608	0/0:28,0:28:84.29:0,84,1328	0/0:23,0:23:69.24:0,69,1102	0/0:27,0:27:81.28:0,81,1291	0/0:25,0:25:75.26:0,75,1187	0/0:21,0:21:60.20:0,60,952	0/0:36,0:36:99:0,108,1720	0/0:24,0:24:66.21:0,66,1030	0/0:18,0:18:54.18:0,54,862	0/0:29,0:29:87.30:0,87,1386	0/0:13,0:13:39.13:0,39,617	0/0:29,0:29:84.29:0,84,1329	0/0:30,0:30:87.30:0,87,1390	0/0:19,0:19:54.18:0,54,862	0/0:22,0:22:60.19:0,60,934	1/1:0,32:32:96.27:1305,96,0	1/1:0,22:22:63.21:881,63,0	1/1:0,17:17:45.15:629,45,0	0/0:22,0:22:66.22:0,66,1026	0/0:22,0:22:66.21:0,66,1031	0/0:15,0:15:45.14:0,45,695	0/0:18,0:18:54.12:0,54,810	0/0:26,0:26:78.26:0,78,1217	1/1:0,15:15:42.14:587,42,0	0/0:30,0:30:84.23:0,84,1269
chr10	54659879	.	TA	T	891.60	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.293;DP=607;FS=2.771;HRun=2;HaplotypeScore=57.5436;InbreedingCoeff=0.9895;MQ=88.48;MQ0=0;MQRankSum=-3.229;QD=31.84;ReadPosRankSum=2.949;VQSLOD=3.5153;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:96.33:0,96,1437	1/1:0,9:9:27.09:351,27,0	0/0:21,0:21:56.84:0,57,791	0/0:25,0:25:72.21:0,72,1039	0/0:15,0:15:45.15:0,45,674	0/0:20,0:20:60.19:0,60,878	0/0:32,0:32:96.28:0,96,1378	0/0:40,0:40:99:0,120,1711	0/0:23,0:23:69.23:0,69,1034	0/0:17,0:17:51.17:0,51,765	0/0:10,0:10:30.10:0,30,450	0/0:30,0:30:90.29:0,90,1328	0/0:26,0:26:75.25:0,75,1100	0/0:31,0:31:90.30:0,90,1330	0/0:21,0:21:63.21:0,63,925	1/1:1,18:19:51.17:662,51,0	0/0:32,0:32:93.30:0,93,1373	0/0:27,0:27:81.27:0,81,1214	0/0:22,0:22:57.19:0,57,837	0/0:9,0:9:27.09:0,27,405	0/0:42,0:42:99:0,126,1866	0/0:20,0:20:60.19:0,60,881	0/0:15,0:15:45.15:0,45,672	0/0:23,0:23:63.21:0,63,943	0/0:8,0:8:24.08:0,24,360	0/0:19,0:19:57.19:0,57,846	0/0:13,0:13:39.13:0,39,583	0/0:5,0:5:15.05:0,15,225
chr10	54660732	.	ATTT	A	8555.11	PASS	AB=1.000;AC=51;AF=0.911;AN=56;BaseQRankSum=-4.060;DP=471;FS=8.153;HRun=14;HaplotypeScore=88.8887;InbreedingCoeff=0.6343;MQ=64.00;MQ0=1;MQRankSum=1.914;QD=19.71;ReadPosRankSum=4.671;VQSLOD=3.6797;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,30:35:43.53:714,44,0	1/1:5,0:5:1.54:12,2,0	0/0:21,0:12:14.30:0,14,256	0/0:15,0:9:1.04:0,1,146	1/1:1,12:13:36.09:421,36,0	1/1:3,13:16:27.05:316,27,0	1/1:4,12:16:21.02:245,21,0	1/1:9,21:31:59.90:668,60,0	1/1:2,15:17:36.06:421,36,0	1/1:4,12:16:36.06:418,36,0	1/1:3,19:22:38.88:440,39,0	1/1:0,12:12:21.04:243,21,0	1/1:1,17:18:45.12:526,45,0	1/1:1,10:11:21.06:245,21,0	1/1:3,10:13:25.22:283,25,0	1/1:10,0:10:17.23:90,17,0	1/1:3,20:23:48.06:554,48,0	1/1:2,21:23:51.10:596,51,0	1/1:16,0:16:10.95:54,11,0	1/1:18,0:18:13.14:110,13,0	0/1:9,0:9:0.11:13,0,0	1/1:1,15:16:36.02:421,36,0	1/1:4,9:13:20.81:245,21,0	1/1:2,9:11:24.05:281,24,0	1/1:1,12:13:24.03:281,24,0	1/1:4,15:19:45.08:526,45,0	1/1:27,0:27:37.71:260,38,0	1/1:3,7:11:13.60:173,14,0
chr10	54660741	.	T	TAAA	359.25	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=4.676;DP=471;FS=4.182;HRun=0;HaplotypeScore=126.6668;InbreedingCoeff=0.4641;MQ=63.36;MQ0=2;MQRankSum=-4.894;QD=5.53;ReadPosRankSum=-2.271;VQSLOD=2.4749;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:75.20:0,75,859	1/1:0,2:2:5.99:75,6,0	0/0:28,0:13:33.11:0,33,502	0/1:15,0:8:22.52:23,0,245	0/0:14,0:14:41.90:0,42,465	0/0:18,0:18:42.04:0,42,468	0/0:14,0:14:24.05:0,24,247	0/0:29,0:29:83.85:0,84,887	0/0:16,0:16:41.98:0,42,466	0/0:14,0:14:42.10:0,42,476	0/0:22,0:22:57.05:0,57,706	0/0:15,0:15:30.08:0,30,375	0/0:19,0:19:50.83:0,51,536	0/0:12,0:12:27.07:0,27,316	0/0:14,0:14:32.97:0,33,353	1/1:0,6:6:18.06:326,18,0	0/0:21,0:21:47.87:0,48,524	0/0:26,0:26:62.68:0,63,655	0/1:14,0:14:60.02:60,0,163	0/0:19,0:19:15.82:0,16,154	0/0:8,0:8:11.60:0,12,93	0/0:18,0:18:51.14:0,51,623	0/0:13,0:13:35.94:0,36,423	0/0:13,0:13:32.94:0,33,362	0/0:12,0:12:27.07:0,27,300	0/0:20,0:20:56.94:0,57,599	0/1:28,0:28:7.60:8,0,265	0/0:8,0:8:18.05:0,18,191
chr10	54660746	.	T	TAAAA	4175.55	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=5.379;DP=482;FS=7.120;HRun=2;HaplotypeScore=123.3273;InbreedingCoeff=0.9514;MQ=65.28;MQ0=2;MQRankSum=-5.265;QD=51.55;ReadPosRankSum=-1.182;VQSLOD=1.9369;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:78.25:0,78,1046	1/1:4,0:4:12.04:241,12,0	0/0:31,0:16:23.95:0,24,426	0/0:12,0:5:4.46:0,4,49	0/0:15,0:15:45.13:0,45,610	0/0:18,0:18:42.10:0,42,556	0/0:16,0:16:27.07:0,27,347	0/0:33,0:33:89.41:0,89,1177	0/0:16,0:16:42.12:0,42,556	0/0:14,0:14:42.14:0,42,572	0/0:22,0:22:60.19:0,60,865	0/0:15,0:15:33.11:0,33,489	0/0:20,0:20:53.75:0,54,688	0/0:12,0:12:27.09:0,27,374	0/0:14,0:14:34.76:0,35,223	1/1:12,0:12:33.11:634,33,0	0/0:21,0:21:51.15:0,51,655	0/0:26,0:26:65.89:0,66,786	1/1:11,3:14:39.13:747,39,0	1/1:19,0:19:49.93:961,50,0	1/1:7,0:7:9.03:138,9,0	0/0:18,0:18:48.16:0,48,677	0/0:12,0:12:33.09:0,33,456	0/0:13,0:13:33.11:0,33,465	0/0:12,0:12:27.09:0,27,361	0/0:19,0:19:57.05:0,57,750	1/1:23,2:25:72.71:1453,73,0	0/0:8,0:8:18.06:0,18,231
chr10	54661866	.	C	CGT	909.95	PASS	AB=1.000;AC=39;AF=0.750;AN=52;BaseQRankSum=-0.708;DP=562;FS=13.470;HRun=0;HaplotypeScore=124.4555;InbreedingCoeff=-0.0326;MQ=69.78;MQ0=15;MQRankSum=0.346;QD=1.90;ReadPosRankSum=-0.634;VQSLOD=1.4017;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:32:11.85:84,0,12	1/1:3,0:3:2.50:9,2,0	./.	./.	1/1:18,0:17:7.71:54,8,0	0/1:22,0:19:12.52:23,0,13	1/1:20,0:20:4.19:30,4,0	1/1:25,0:25:0.28:1,0,0	1/1:22,0:22:7.19:49,7,0	1/1:10,0:8:6:52,6,0	1/1:15,0:15:9:81,9,0	1/1:20,0:20:5.85:46,6,0	0/1:11,0:11:11.32:30,0,11	0/1:16,0:16:1.58:38,0,2	1/1:13,0:13:3.48:39,3,0	0/1:13,0:13:11.68:17,0,12	1/1:24,2:26:9.77:96,10,0	0/1:16,0:16:19.17:40,0,19	0/1:23,0:22:15.05:29,0,15	0/0:6,0:6:2.57:0,3,22	0/1:66,0:66:14.88:18,0,15	1/1:11,1:12:9.88:85,10,0	1/1:16,0:14:3.85:30,4,0	1/1:15,9:24:3.01:43,3,0	0/0:16,0:15:5.57:0,6,31	1/1:20,0:18:11.76:77,12,0	0/1:15,0:13:1.14:1,0,23	1/1:19,0:16:8.97:73,9,0
chr10	54661911	.	GTA	G	2696.10	PASS	AB=0.969;AC=33;AF=0.589;AN=56;BaseQRankSum=4.039;DP=567;FS=21.426;HRun=0;HaplotypeScore=95.8172;InbreedingCoeff=0.1894;MQ=47.65;MQ0=25;MQRankSum=1.276;QD=6.14;ReadPosRankSum=-0.279;VQSLOD=1.5889;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:33,0:32:6.57:181,7,0	0/1:4,2:5:30.03:30,0,37	0/0:11,0:8:14.16:0,14,153	0/0:17,0:9:23.95:0,24,212	0/1:16,0:15:18.93:19,0,172	0/0:23,0:20:8.65:0,9,247	0/1:28,1:29:50.84:51,0,279	0/1:34,0:28:9.50:10,0,419	0/1:16,0:16:71.72:72,0,141	0/0:23,0:21:28.24:0,28,467	0/1:10,0:10:13:62,0,13	1/1:14,0:14:6.11:117,6,0	1/1:12,0:12:26.02:188,26,0	0/0:21,0:21:7.30:0,7,330	0/1:13,0:13:18:18,0,177	0/1:20,0:20:42.47:42,0,242	1/1:22,0:22:2.81:173,3,0	1/1:23,0:21:4.45:221,4,0	1/1:22,0:17:16.24:260,16,0	1/1:13,0:12:0.73:120,1,0	1/1:54,0:47:31.11:406,31,0	1/1:15,0:14:6.18:98,6,0	1/1:11,0:11:7.85:84,8,0	1/1:30,0:29:41.77:318,42,0	0/0:16,0:14:5.77:0,6,83	0/1:21,0:19:31.53:32,0,230	1/1:24,1:23:41.09:377,41,0	0/0:17,0:13:32.71:0,33,306
chr10	54662316	.	AAAAT	A	1460.25	PASS	AC=26;AF=0.565;AN=46;BaseQRankSum=4.638;DP=290;FS=0.855;HRun=0;HaplotypeScore=43.9941;InbreedingCoeff=0.7130;MQ=50.80;MQ0=12;MQRankSum=0.285;QD=13.52;ReadPosRankSum=-1.710;VQSLOD=2.6587;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:24.08:0,24,538	1/1:2,0:6:8.97:76,9,0	./.	./.	1/1:6,5:11:9.02:118,9,0	1/1:2,8:10:21.05:302,21,0	1/1:3,1:4:3.01:46,3,0	1/1:19,0:19:17.63:108,18,0	1/1:3,3:6:9.03:139,9,0	1/1:7,1:8:3.01:46,3,0	1/1:6,3:9:6.02:93,6,0	0/0:6,0:6:9.03:0,9,211	0/0:9,0:9:6.02:0,6,141	1/1:5,1:6:3.01:46,3,0	./.	1/1:1,0:5:8.98:77,9,0	0/0:28,0:27:27.09:0,27,633	0/0:28,0:28:30.03:0,30,629	0/0:11,0:8:6.02:0,6,108	0/0:1,0:2:3.01:0,3,36	./.	./.	0/0:7,0:7:6.02:0,6,141	0/0:5,0:5:3.01:0,3,70	1/1:4,6:9:15.05:232,15,0	1/1:4,5:9:15.04:210,15,0	0/0:9,0:15:15.05:0,15,242	1/1:1,3:3:9.03:139,9,0
chr10	54663513	.	A	AAGTCCCC	10939	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=11.437;DP=700;FS=0.410;HRun=0;HaplotypeScore=172.2329;InbreedingCoeff=0.9962;MQ=91.65;MQ0=0;MQRankSum=-15.182;QD=108.31;ReadPosRankSum=0.113;VQSLOD=6.1833;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,141,3839	1/1:0,5:5:15.05:628,15,0	0/0:30,0:30:90.31:0,90,2345	0/0:32,0:32:90.31:0,90,2376	0/0:17,0:17:45.15:0,45,1207	0/0:18,0:18:54.19:0,54,1475	0/0:30,0:30:87.30:0,87,2429	0/0:29,0:29:87.30:0,87,2399	0/0:21,0:21:63.22:0,63,1759	0/0:37,0:37:99:0,108,2926	0/0:18,0:18:51.17:0,51,1420	0/0:31,0:31:93.31:0,93,2492	0/0:24,0:24:72.25:0,72,1958	0/0:31,0:31:90.31:0,90,2441	0/0:27,0:27:81.25:0,81,2058	1/1:5,15:20:60.21:2377,60,0	0/0:25,0:25:75.21:0,75,1974	0/0:28,0:28:75.23:0,75,2015	1/1:0,9:9:24.08:1005,24,0	1/1:2,25:28:75.26:3117,75,0	1/1:3,8:14:27.09:1130,27,0	0/0:31,0:31:93.31:0,93,2537	0/0:23,0:23:69.19:0,69,1795	0/0:39,0:39:99:0,117,3165	0/0:21,0:21:63.22:0,63,1735	0/0:24,0:24:69.23:0,69,1867	1/1:4,19:25:69.20:2682,69,0	0/0:15,0:15:45.15:0,45,1255
chr10	54666007	.	A	AT	495.95	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=2.498;DP=606;FS=7.532;HRun=7;HaplotypeScore=67.0791;InbreedingCoeff=0.9763;MQ=73.08;MQ0=2;MQRankSum=-1.307;QD=17.71;ReadPosRankSum=-0.353;VQSLOD=3.0312;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:87.08:0,87,829	1/1:2,10:12:23.97:255,24,0	0/0:17,0:14:28.31:0,28,230	0/0:15,0:13:11.50:0,12,90	0/0:25,0:25:69.07:0,69,654	0/0:29,0:29:52.21:0,52,646	0/0:20,0:20:45.04:0,45,424	0/0:32,0:32:72.09:0,72,689	0/0:19,0:19:54.07:0,54,516	0/0:35,0:35:93.13:0,93,892	0/0:22,0:22:57.03:0,57,537	0/0:28,0:28:81.07:0,81,768	0/0:27,0:27:72.09:0,72,689	0/0:12,0:12:33.05:0,33,318	0/0:17,0:17:51.08:0,51,493	1/1:2,14:16:30.09:362,30,0	0/0:28,0:28:65.96:0,66,607	0/0:15,0:15:30.03:0,30,285	0/0:20,0:20:48.07:0,48,463	0/0:27,0:27:63.08:0,63,602	0/0:6,0:6:18.03:0,18,174	0/0:16,0:16:45.07:0,45,435	0/0:21,0:21:63.06:0,63,594	0/0:18,0:18:48.06:0,48,457	0/0:27,0:27:72.11:0,72,695	0/0:27,0:27:72.09:0,72,686	0/0:29,0:29:75.05:0,75,698	0/0:15,0:15:39.06:0,39,377
chr10	54666277	.	TATATCAC	T	2090.62	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.019;DP=734;FS=0.714;HRun=0;HaplotypeScore=174.2205;InbreedingCoeff=0.9987;MQ=88.62;MQ0=0;MQRankSum=-8.860;QD=69.69;ReadPosRankSum=2.679;VQSLOD=3.9313;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,123,4823	1/1:0,9:9:24.08:632,24,0	0/0:24,0:24:69.24:0,69,2352	0/0:30,0:31:81.27:0,81,3017	0/0:30,0:30:87.30:0,87,3374	0/0:26,0:26:75.26:0,75,2927	0/0:32,0:32:96.30:0,96,3559	0/0:32,0:32:93.32:0,93,3534	0/0:34,0:34:96.33:0,96,3497	0/0:35,0:35:99:0,102,3795	0/0:22,0:22:66.23:0,66,2642	0/0:32,0:32:87.30:0,87,3477	0/0:28,0:28:78.27:0,78,2947	0/0:28,0:28:75.24:0,75,2888	0/0:28,0:28:81.28:0,81,3248	1/1:0,21:21:60.21:1580,60,0	0/0:27,0:27:78.27:0,78,2976	0/0:26,0:26:78.25:0,78,2875	0/0:25,0:25:72.25:0,72,2723	0/0:19,0:19:54.19:0,54,2126	0/0:39,0:39:99:0,114,4336	0/0:15,0:15:45.15:0,45,1789	0/0:21,0:21:63.20:0,63,2400	0/0:32,0:32:93.32:0,93,3575	0/0:22,0:22:66.23:0,66,2451	0/0:18,0:18:54.19:0,54,2063	0/0:26,0:26:78.27:0,78,3099	0/0:10,0:10:30.10:0,30,1182
chr10	54667628	.	C	CA	4811.74	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=13.804;DP=573;FS=3.545;HRun=7;HaplotypeScore=88.1549;InbreedingCoeff=0.9360;MQ=67.92;MQ0=0;MQRankSum=-6.381;QD=25.59;ReadPosRankSum=0.277;VQSLOD=5.2221;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,17:25:63.12:711,63,0	1/1:4,0:11:20.09:102,20,0	0/0:16,0:15:4.58:0,5,225	0/1:15,0:12:0.21:0,0,151	0/0:39,0:39:99:0,102,972	0/0:25,0:25:72.10:0,72,690	0/0:7,0:7:21.03:0,21,203	0/0:41,0:41:90.10:0,90,854	0/0:16,0:16:45.06:0,45,429	0/0:21,0:21:54.06:0,54,511	0/0:20,0:20:54.09:0,54,521	1/1:2,13:15:45.09:512,45,0	1/1:2,16:18:54.14:630,54,0	0/0:21,0:21:63.10:0,63,607	0/0:17,0:16:45.07:0,45,435	1/1:7,0:20:43:222,43,0	1/1:2,20:22:66.20:790,66,0	1/1:6,8:14:30.08:349,30,0	0/0:22,0:22:44.53:0,45,160	0/0:32,0:32:55.53:0,56,298	0/0:7,0:7:13.02:0,13,50	1/1:0,13:13:39.12:466,39,0	1/1:1,18:19:54.17:648,54,0	1/1:4,12:16:33.08:382,33,0	0/0:27,0:27:78.12:0,78,748	0/0:27,0:26:75.12:0,75,724	0/0:32,0:31:61.50:0,61,297	0/0:15,0:15:45.07:0,45,435
chr10	54667666	.	A	AT	4966.25	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=4.907;DP=556;FS=2.630;HRun=8;HaplotypeScore=83.4712;InbreedingCoeff=0.9918;MQ=66.60;MQ0=0;MQRankSum=-5.279;QD=28.22;ReadPosRankSum=-0.876;VQSLOD=4.8279;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,14:18:39.12:448,39,0	1/1:0,11:11:33.10:378,33,0	0/0:9,0:9:14.85:0,15,124	0/0:14,0:13:20.74:0,21,173	0/0:33,0:33:87.01:0,87,788	0/0:28,0:28:69.01:0,69,631	0/0:11,0:11:27.01:0,27,247	0/0:33,0:33:72:0,72,649	0/0:19,0:19:51.02:0,51,467	0/0:19,0:19:51.01:0,51,463	0/0:17,0:17:39.02:0,39,357	1/1:2,14:17:47.97:533,48,0	1/1:3,18:21:54.16:618,54,0	0/0:23,0:23:69.02:0,69,626	0/0:15,0:14:45.02:0,45,412	1/1:5,17:22:60.18:692,60,0	1/1:3,18:21:54.16:623,54,0	1/1:2,12:14:33.10:377,33,0	0/0:16,0:16:42.01:0,42,381	0/0:43,0:43:99:0,117,1058	0/0:4,0:4:12.01:0,12,110	1/1:3,11:14:33.06:366,33,0	1/1:7,17:24:54.16:619,54,0	1/1:1,13:14:26.90:311,27,0	0/0:20,0:20:51.02:0,51,466	0/0:28,0:28:78.01:0,78,706	0/0:32,0:32:90.05:0,90,824	0/0:15,0:15:45.02:0,45,412
chr10	54667872	.	TAAAC	T	1111.35	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.595;DP=698;FS=1.598;HRun=0;HaplotypeScore=117.5353;InbreedingCoeff=0.9952;MQ=59.68;MQ0=2;MQRankSum=-0.098;QD=30.87;ReadPosRankSum=2.343;VQSLOD=3.7070;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,108,2494	1/1:4,6:10:20.90:283,21,0	0/0:34,0:22:29.65:0,30,574	0/0:28,0:23:41.45:0,41,758	0/0:28,0:28:69.20:0,69,1584	0/0:27,0:27:72.25:0,72,1733	0/0:18,0:18:42.14:0,42,1011	0/0:33,0:33:60.20:0,60,1371	0/0:27,0:27:60.19:0,60,1404	0/0:21,0:21:62.91:0,63,1387	0/0:21,0:21:45.15:0,45,1096	0/0:20,0:20:51.18:0,51,1244	0/0:17,0:17:39.10:0,39,848	0/0:24,0:24:57.18:0,57,1323	0/0:20,0:20:54.19:0,54,1306	1/1:4,22:26:56.99:949,57,0	0/0:41,0:41:87.16:0,87,1983	0/0:19,0:19:39.10:0,39,871	0/0:24,0:23:24.08:0,24,592	0/0:24,0:23:57.18:0,57,1311	0/0:20,0:20:54.17:0,54,1273	0/0:13,0:13:33.11:0,33,814	0/0:18,0:19:48.14:0,48,1059	0/0:31,0:31:63.20:0,63,1504	0/0:29,0:29:75.26:0,75,1842	0/0:28,0:27:63.21:0,63,1465	0/0:37,0:37:84.27:0,84,1986	0/0:10,0:10:24.08:0,24,581
chr10	54668010	.	G	GACA	10797.26	PASS	AB=0.618;AC=43;AF=0.768;AN=56;BaseQRankSum=-2.695;DP=654;FS=0.661;HRun=0;HaplotypeScore=149.1303;InbreedingCoeff=0.4230;MQ=61.80;MQ0=5;MQRankSum=0.790;QD=18.75;ReadPosRankSum=-0.077;VQSLOD=4.7529;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:36,0:36:43.21:421,43,0	0/0:6,0:11:13.39:0,13,88	0/0:24,0:16:12.04:0,12,158	0/0:29,0:24:18.57:0,19,193	1/1:10,18:29:15.66:916,16,0	0/1:7,18:28:46.84:559,0,47	0/1:11,13:25:53.91:371,0,54	0/1:17,14:32:79.20:564,0,79	0/1:9,18:29:33.42:785,0,33	1/1:12,10:21:33.11:623,33,0	1/1:6,14:20:0.67:732,1,0	1/1:13,0:28:36.08:441,36,0	1/1:20,0:38:36.03:509,36,0	1/1:7,12:19:24.08:476,24,0	0/1:8,14:23:5.36:619,0,5	0/0:7,0:14:8.09:0,8,113	1/1:9,0:15:23.99:285,24,0	1/1:14,0:14:13.86:141,14,0	1/1:13,0:23:12.53:377,13,0	1/1:10,0:25:32.82:369,33,0	1/1:20,2:34:15.01:176,15,0	1/1:11,0:21:12.50:141,13,0	1/1:10,0:14:24.41:280,24,0	1/1:24,0:23:33.97:347,34,0	1/1:3,4:8:9.03:179,9,0	1/1:9,13:22:39.13:751,39,0	1/1:16,1:31:39.29:516,39,0	1/1:7,8:15:12.04:220,12,0
chr10	54668032	.	AC	A	96.05	PASS	AB=0.929;AC=3;AF=0.054;AN=56;BaseQRankSum=5.632;DP=730;FS=1.000;HRun=1;HaplotypeScore=130.1343;InbreedingCoeff=0.6446;MQ=54.22;MQ0=11;MQRankSum=-5.654;QD=4.37;ReadPosRankSum=2.618;VQSLOD=0.5791;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,117,1728	1/1:6,3:9:20.83:150,21,0	0/0:31,0:16:48.15:0,48,689	0/0:28,0:21:63.20:0,63,911	0/0:30,0:29:84.13:0,84,949	0/0:31,0:31:60.12:0,60,711	0/0:29,0:29:60.13:0,60,757	0/0:33,0:33:90.24:0,90,1173	0/0:29,0:29:69.10:0,69,765	0/0:26,0:25:75.18:0,75,930	0/0:23,0:23:63.10:0,63,712	0/0:26,0:26:51.15:0,51,732	0/0:33,0:33:60.09:0,60,861	0/0:21,0:21:51.06:0,51,553	0/0:26,0:26:66.10:0,66,742	0/1:12,1:13:27.75:50,0,28	0/0:23,0:23:50.98:0,51,675	0/0:14,0:14:39.09:0,39,550	0/0:26,0:25:75.13:0,75,1061	0/0:34,0:34:93.12:0,93,1189	0/0:28,0:27:33.06:0,33,410	0/0:21,0:21:51.13:0,51,694	0/0:26,0:25:57.65:0,58,826	0/0:25,0:25:58.22:0,58,767	0/0:19,0:19:51.11:0,51,657	0/0:33,0:33:95.96:0,96,1169	0/0:30,0:28:68.81:0,69,898	0/0:21,0:21:45.06:0,45,548
chr10	54668038	.	GCAACAACAA	G	1163.28	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.551;DP=731;FS=0.000;HRun=0;HaplotypeScore=222.0237;InbreedingCoeff=0.9956;MQ=56.26;MQ0=11;MQRankSum=-2.116;QD=61.23;ReadPosRankSum=-0.155;VQSLOD=3.1882;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,117,3204	1/1:1,5:6:18.06:449,18,0	0/0:32,0:19:44.76:0,45,1094	0/0:28,0:23:51.87:0,52,1737	0/0:32,0:31:50.92:0,51,2652	0/0:33,0:33:66.23:0,66,2360	0/0:30,0:30:66.21:0,66,1976	0/0:37,0:37:95.06:0,95,2235	0/0:30,0:30:72.25:0,72,2599	0/0:31,0:30:89.85:0,90,2235	0/0:27,0:27:78.10:0,78,2678	0/0:19,0:19:51.18:0,51,2037	0/0:23,0:23:60.15:0,60,2272	0/0:19,0:19:45.15:0,45,1665	0/0:29,0:29:75.23:0,75,2502	1/1:6,7:13:39.13:834,39,0	0/0:22,0:22:60.15:0,60,1567	0/0:14,0:14:36.01:0,36,784	0/0:24,0:23:69.15:0,69,2040	0/0:39,0:39:99:0,114,3000	0/0:28,0:27:48.04:0,48,690	0/0:21,0:21:60.20:0,60,1372	0/0:28,0:27:71.79:0,72,1913	0/0:26,0:26:62.62:0,63,1419	0/0:20,0:20:57.20:0,57,1650	0/0:34,0:34:78.60:0,79,2847	0/0:28,0:26:63.69:0,64,2518	0/0:17,0:17:32.94:0,33,1206
chr10	54668480	.	TGTGG	T	1382.98	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=7.945;DP=646;FS=3.177;HRun=0;HaplotypeScore=122.7616;InbreedingCoeff=0.7810;MQ=69.97;MQ0=0;MQRankSum=-7.442;QD=30.06;ReadPosRankSum=0.021;VQSLOD=3.1290;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:93.14:0,93,2138	1/1:0,9:9:21.07:416,21,0	0/0:20,0:18:42.20:0,42,1013	0/0:26,0:23:62.70:0,63,1351	0/0:34,0:34:93.31:0,93,2399	0/0:28,0:28:83.98:0,84,1997	0/0:16,0:16:48.08:0,48,1186	0/0:20,0:20:57.16:0,57,1171	0/0:25,0:25:72.23:0,72,1892	0/0:27,0:27:78.21:0,78,1925	0/0:21,0:21:63.20:0,63,1554	0/0:27,0:27:78.25:0,78,2037	0/0:16,0:16:48.12:0,48,1078	0/0:21,0:21:60.19:0,60,1545	0/0:36,0:36:99:0,108,2829	1/1:1,20:21:57.15:1084,57,0	0/0:18,0:20:31.52:0,32,1315	0/0:10,0:10:30.09:0,30,735	0/1:16,0:16:10.72:11,0,474	0/0:27,0:27:47.52:0,48,1112	0/0:29,0:29:14.90:0,15,1206	0/0:31,0:31:90.24:0,90,2103	0/0:24,0:24:69.13:0,69,1650	0/0:15,0:15:43.64:0,44,832	0/0:23,0:23:66.21:0,66,1625	0/0:30,0:30:90.26:0,90,2244	0/0:35,0:33:99:0,99,1595	0/0:5,0:5:15.04:0,15,356
chr10	54669918	.	TA	T	4538.31	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=10.738;DP=657;FS=16.044;HRun=2;HaplotypeScore=66.8874;InbreedingCoeff=0.9913;MQ=72.44;MQ0=2;MQRankSum=0.354;QD=34.91;ReadPosRankSum=-0.819;VQSLOD=3.0447;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,117,1721	1/1:0,6:6:18.06:234,18,0	0/0:29,0:24:59.21:0,59,837	0/0:22,0:18:42.78:0,43,582	0/0:26,0:26:78.26:0,78,1146	0/0:29,0:29:81.26:0,81,1190	0/0:20,0:20:60.20:0,60,896	0/0:38,0:38:99:0,105,1541	0/0:28,0:28:84.22:0,84,1196	0/0:28,0:28:84.28:0,84,1237	0/0:16,0:15:42.14:0,42,629	0/0:17,0:17:51.17:0,51,759	0/0:27,0:27:81.24:0,81,1174	0/0:25,0:25:72.24:0,72,1079	0/0:33,0:33:96.33:0,96,1437	1/1:0,20:20:51.17:662,51,0	0/0:21,0:21:63.19:0,63,921	0/0:4,0:4:12.04:0,12,180	1/1:0,18:18:54.15:683,54,0	1/1:0,28:28:69.22:895,69,0	1/1:0,22:22:63.12:779,63,0	0/0:24,0:24:72.23:0,72,1060	0/0:19,0:19:57.19:0,57,854	0/0:19,0:19:57.18:0,57,832	0/0:27,0:27:78.26:0,78,1162	0/0:25,0:25:75.25:0,75,1124	1/1:0,36:36:99:1285,99,0	0/0:8,0:8:21.07:0,21,315
chr10	54670030	.	ACACT	A	5389.10	PASS	AB=1.000;AC=36;AF=0.643;AN=56;BaseQRankSum=-9.194;DP=597;FS=0.000;HRun=0;HaplotypeScore=138.3758;InbreedingCoeff=-0.3861;MQ=55.53;MQ0=9;MQRankSum=0.657;QD=9.47;ReadPosRankSum=-4.548;VQSLOD=2.4818;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,11:30:72.07:942,72,0	0/1:8,0:8:80.02:80,0,107	0/0:28,0:5:8.92:0,9,78	0/1:29,0:6:0.95:1,0,16	0/1:15,0:15:23.19:23,0,220	0/1:32,0:32:99:162,0,447	1/1:3,23:26:24.01:390,24,0	0/1:32,0:32:99:285,0,216	0/1:15,0:15:58.78:59,0,278	0/1:21,0:21:86.21:86,0,372	0/1:16,0:16:99:114,0,126	1/1:0,18:18:18.53:339,19,0	1/1:0,19:19:18.06:339,18,0	0/1:21,0:21:14.18:14,0,281	0/1:39,0:39:33.86:34,0,901	0/1:11,0:11:44.44:44,0,198	1/1:12,10:21:42:619,42,0	1/1:2,9:11:6.02:92,6,0	0/1:16,0:16:99:111,0,204	0/1:19,0:19:60.45:60,0,247	0/1:26,0:24:66.52:67,0,431	1/1:0,16:16:9.50:162,9,0	1/1:0,15:15:6.02:113,6,0	1/1:0,35:35:43.03:796,43,0	0/1:23,0:23:99:129,0,229	0/1:16,0:16:99:150,0,183	0/1:24,0:24:99:114,0,478	0/1:14,0:14:63.65:64,0,138
chr10	54670032	.	ACT	A	5510.95	PASS	AB=0.951;AC=37;AF=0.661;AN=56;BaseQRankSum=-6.517;DP=592;FS=4.958;HRun=0;HaplotypeScore=119.9307;InbreedingCoeff=-0.3670;MQ=55.45;MQ0=8;MQRankSum=1.317;QD=9.77;ReadPosRankSum=-7.061;VQSLOD=2.8381;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:31,0:31:71.82:575,72,0	0/1:8,1:9:12.88:75,0,13	0/0:27,0:6:8.92:0,9,78	0/1:27,0:5:2.97:3,0,16	0/1:15,1:16:52.72:118,0,53	0/1:30,3:33:99:381,0,130	1/1:25,0:25:23.78:174,24,0	0/1:31,0:31:99:382,0,118	0/1:13,1:14:87.91:126,0,88	0/1:20,1:21:99:209,0,102	0/1:16,0:16:25.06:164,0,25	1/1:18,0:18:18.40:138,18,0	1/1:19,0:19:17.93:138,18,0	0/1:19,1:20:82.49:218,0,82	0/1:36,3:39:99:327,0,318	0/1:10,1:11:49.15:140,0,49	1/1:21,0:20:41.78:317,42,0	1/1:10,0:10:5.96:44,6,0	0/1:14,0:14:43.57:159,0,44	0/1:18,1:19:21.84:207,0,22	0/1:24,0:22:99:165,0,123	1/1:16,0:16:9.44:81,9,0	1/1:15,0:15:5.98:46,6,0	1/1:35,0:35:41.84:324,42,0	0/1:22,1:23:49.78:266,0,50	0/1:15,2:17:21.12:291,0,21	0/1:22,2:24:99:244,0,151	1/1:15,0:15:2.90:199,3,0
chr10	54670316	.	TAC	T	1577.97	PASS	AB=0.815;AC=43;AF=0.860;AN=50;BaseQRankSum=4.221;DP=576;FS=1.574;HRun=0;HaplotypeScore=130.7856;InbreedingCoeff=0.2623;MQ=53.16;MQ0=22;MQRankSum=-0.964;QD=3.27;ReadPosRankSum=2.478;VQSLOD=2.7771;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:41:5.64:28,6,0	0/1:7,2:9:22.40:22,0,43	./.	./.	0/1:12,1:13:0:0,0,0	1/1:18,13:30:25.81:280,26,0	1/1:10,5:16:9.49:95,9,0	./.	1/1:17,8:26:9.02:94,9,0	1/1:11,4:13:8.80:69,9,0	1/1:8,6:14:8.80:81,9,0	1/1:9,0:19:14.20:70,14,0	1/1:15,0:24:8.34:42,8,0	1/1:10,9:20:15.02:157,15,0	0/1:17,12:29:3.35:207,0,3	0/0:23,0:23:12.32:0,12,153	1/1:28,0:33:2.84:14,3,0	1/1:15,0:15:8.52:42,9,0	1/1:21,0:21:8.64:47,9,0	1/1:10,0:12:5.77:30,6,0	1/1:27,0:25:5.31:25,5,0	0/0:5,0:8:0:0,0,0	1/1:13,0:15:2.60:10,3,0	1/1:24,0:29:5.68:28,6,0	1/1:8,5:12:6.01:63,6,0	1/1:11,3:14:9.02:94,9,0	1/1:11,0:22:25.53:126,26,0	1/1:8,3:11:6.01:63,6,0
chr10	54670852	.	C	CAACA	7105.94	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=4.450;DP=519;FS=6.978;HRun=0;HaplotypeScore=115.0193;InbreedingCoeff=0.9930;MQ=78.94;MQ0=0;MQRankSum=-12.077;QD=55.52;ReadPosRankSum=0.982;VQSLOD=6.1271;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,22:31:75.13:1768,75,0	0/0:13,0:13:33.11:0,33,593	0/0:14,0:14:30.10:0,30,505	0/0:23,0:23:54.04:0,54,883	0/0:24,0:23:66.23:0,66,1179	0/0:20,0:20:60.21:0,60,1070	0/0:24,0:24:66.23:0,66,1186	0/0:37,0:37:99:0,99,1658	0/0:18,0:18:48.16:0,48,861	0/0:19,0:19:54.18:0,54,970	0/0:23,0:23:60.21:0,60,1078	1/1:4,4:8:12.04:311,12,0	1/1:2,6:9:21.07:529,21,0	0/0:20,0:20:60.14:0,60,1038	0/0:20,0:20:54.16:0,54,940	0/0:8,0:8:24.08:0,24,431	1/1:2,20:22:54.19:1399,54,0	1/1:2,15:16:39.13:1011,39,0	0/0:18,0:18:36.08:0,36,613	0/0:19,0:19:48.16:0,48,862	0/0:22,0:22:60.19:0,60,1048	1/1:2,10:13:27.09:698,27,0	1/1:1,10:11:33.11:827,33,0	1/1:8,9:17:24.54:563,25,0	0/0:18,0:17:51.15:0,51,878	0/0:22,0:22:54.17:0,54,933	0/0:18,0:18:54.19:0,54,968	0/0:11,0:11:27.09:0,27,484
chr10	54671485	.	GA	G	1877.89	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=0.520;DP=382;FS=16.493;HRun=10;HaplotypeScore=77.6214;InbreedingCoeff=0.8581;MQ=42.84;MQ0=16;MQRankSum=-3.256;QD=10.98;ReadPosRankSum=2.605;VQSLOD=1.3453;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,16:20:35.87:309,36,0	0/0:8,0:8:15.03:0,15,152	0/0:8,0:3:4.99:0,5,25	0/0:7,0:1:2.96:0,3,19	0/0:24,1:25:29.74:0,30,291	0/0:11,0:12:23.84:0,24,218	0/0:17,0:17:41.99:0,42,424	0/0:13,1:12:6.60:0,7,229	0/0:12,0:12:21.02:0,21,219	0/0:14,0:14:24.06:0,24,265	0/0:11,1:11:21.06:0,21,230	1/1:2,7:9:11.99:103,12,0	1/1:4,5:8:8.98:78,9,0	0/0:9,1:10:14.42:0,14,109	0/0:11,0:11:24.04:0,24,243	0/0:9,0:9:21.05:0,21,222	1/1:13,10:22:28.86:240,29,0	1/1:10,4:13:26.46:225,26,0	1/1:9,8:16:29.95:258,30,0	1/1:7,10:16:19.59:161,20,0	0/0:6,2:7:2.50:0,2,9	1/1:1,10:10:23.94:208,24,0	1/1:4,9:11:23.79:195,24,0	1/1:13,8:18:18.62:177,19,0	0/0:17,0:17:24.02:0,24,245	0/0:18,0:17:39.03:0,39,398	1/1:6,6:11:0.73:133,1,0	0/0:9,0:7:12.03:0,12,132
chr10	54671500	.	C	CA	2848.45	PASS	AB=0.799;AC=48;AF=0.857;AN=56;BaseQRankSum=-0.647;DP=454;FS=2.091;HRun=14;HaplotypeScore=86.3328;InbreedingCoeff=-0.1502;MQ=52.04;MQ0=13;MQRankSum=-1.700;QD=6.27;ReadPosRankSum=-0.836;VQSLOD=2.6985;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:21,8:27:0.89:210,0,1	0/1:4,2:7:10.38:32,0,10	0/1:17,0:5:7.71:16,0,8	0/1:13,0:7:9.13:12,0,9	1/1:12,1:25:28.56:146,29,0	1/1:5,2:15:20.13:115,20,0	1/1:11,0:16:14.20:71,14,0	1/1:16,0:22:39.97:212,40,0	1/1:9,1:17:11.36:57,11,0	1/1:5,0:14:22.92:130,23,0	1/1:8,0:11:11.48:62,11,0	0/1:10,5:15:10.31:35,0,10	0/1:4,5:10:8.81:88,0,9	1/1:5,0:7:11.48:60,11,0	1/1:6,0:10:14.29:74,14,0	1/1:5,6:11:9:79,9,0	1/1:15,10:25:5.50:275,6,0	0/1:13,4:17:27.46:193,0,27	1/1:10,0:21:31.28:158,31,0	1/1:13,0:17:23.60:116,24,0	1/1:4,1:10:6.11:28,6,0	1/1:10,4:13:12:106,12,0	0/1:14,6:20:21.68:178,0,22	1/1:19,1:18:20.95:173,21,0	1/1:10,1:16:16.85:87,17,0	1/1:10,2:19:28.37:161,28,0	1/1:10,0:11:13.99:72,14,0	1/1:5,1:8:5.68:29,6,0
chr10	54672010	.	TA	T	2840.02	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=13.037;DP=557;FS=0.000;HRun=10;HaplotypeScore=60.7565;InbreedingCoeff=0.9792;MQ=64.18;MQ0=3;MQRankSum=-0.155;QD=18.93;ReadPosRankSum=3.613;VQSLOD=4.2412;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,23:23:47.89:407,48,0	0/0:11,0:11:31.32:0,31,328	0/0:14,0:11:26.97:0,27,264	0/0:11,0:7:15.04:0,15,165	0/0:30,0:29:78.20:0,78,856	0/0:23,0:23:63.15:0,63,683	0/0:9,0:9:24.04:0,24,254	0/0:37,2:39:41.11:0,41,886	0/0:18,0:18:42.10:0,42,456	0/0:32,0:32:87.19:0,87,943	0/0:31,0:31:87.21:0,87,945	1/1:2,19:21:53.98:469,54,0	1/1:2,10:13:15.44:244,15,0	0/0:14,0:15:27.07:0,27,292	0/0:15,0:15:39.05:0,39,409	0/0:15,0:15:42.11:0,42,465	1/1:2,21:22:59.99:521,60,0	1/1:4,10:13:23.98:208,24,0	0/0:22,1:23:31.10:0,31,571	0/0:31,0:31:87.24:0,87,962	0/0:10,0:10:27.03:0,27,277	1/1:0,14:14:38.99:338,39,0	1/1:3,17:21:50.98:443,51,0	1/1:1,19:20:47.97:417,48,0	0/0:24,0:24:69.19:0,69,763	0/0:16,1:17:7.03:0,7,306	0/0:24,0:23:60.16:0,60,664	0/0:14,0:14:42.11:0,42,465
chr10	54674017	.	T	TGGTGTC	37385.16	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-9.159;DP=660;FS=2.250;HRun=0;HaplotypeScore=122.1746;InbreedingCoeff=0.9925;MQ=78.11;MQ0=0;MQRankSum=-18.714;QD=82.71;ReadPosRankSum=1.544;VQSLOD=6.4235;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,38:46:99:3987,114,0	0/0:14,0:14:42.14:0,42,962	0/0:24,0:24:72.24:0,72,1512	0/0:23,0:23:54.13:0,54,1063	1/1:5,20:26:63.22:2155,63,0	1/1:5,17:26:60.21:2108,60,0	1/1:2,18:22:57.20:2007,57,0	1/1:16,15:33:84.27:2575,84,0	1/1:3,20:24:66.23:2286,66,0	1/1:7,14:25:61.42:1910,61,0	1/1:1,9:12:18.06:638,18,0	1/1:3,17:22:54.19:1844,54,0	1/1:3,17:20:51.18:1784,51,0	1/1:2,24:27:72.25:2549,72,0	1/1:5,26:32:84.29:2898,84,0	0/0:35,0:35:99:0,99,2243	1/1:4,13:18:36.12:1272,36,0	1/1:3,5:8:21.07:738,21,0	0/0:20,0:20:60.19:0,60,1305	0/0:25,0:25:72.25:0,72,1676	0/0:34,0:34:90.31:0,90,2095	1/1:5,10:17:36.12:1223,36,0	1/1:5,15:22:57.20:1967,57,0	1/1:3,13:17:24.08:774,24,0	1/1:7,12:24:51.18:1691,51,0	1/1:5,21:27:75.26:2563,75,0	0/0:33,0:32:93.32:0,93,2176	1/1:2,2:4:12.04:417,12,0
chr10	54674342	.	GA	G	4215.48	PASS	AB=0.678;AC=44;AF=0.786;AN=56;BaseQRankSum=-0.867;DP=526;FS=0.000;HRun=14;HaplotypeScore=80.6748;InbreedingCoeff=-0.0431;MQ=67.47;MQ0=4;MQRankSum=-0.985;QD=8.67;ReadPosRankSum=3.616;VQSLOD=4.2350;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:12,8:21:2.57:172,0,3	1/1:3,8:11:20.78:144,21,0	0/0:39,1:17:6.94:0,7,114	0/1:33,0:17:5.83:6,0,59	0/1:12,18:30:25.43:237,0,25	1/1:11,6:17:20.64:138,21,0	0/1:3,6:12:44.89:45,0,62	1/1:7,12:21:37.33:251,37,0	1/1:2,7:10:19.76:129,20,0	1/1:3,11:16:30.73:196,31,0	1/1:3,12:15:7.82:198,8,0	1/1:7,7:15:22.62:149,23,0	1/1:6,8:13:11.46:200,11,0	1/1:14,7:21:5.65:164,6,0	0/1:3,5:9:10.86:71,0,11	0/1:9,10:20:2.03:124,0,2	1/1:11,7:18:3.56:152,4,0	1/1:8,4:15:20.62:108,21,0	1/1:11,6:19:12.32:109,12,0	1/1:15,9:27:2.15:256,2,0	0/1:6,7:14:5.32:71,0,5	0/1:12,4:18:26.06:109,0,26	1/1:9,8:17:32.64:225,33,0	1/1:8,6:15:22.20:137,22,0	0/1:6,11:17:38.77:194,0,39	0/1:9,13:22:1.18:210,0,1	1/1:8,14:25:22.87:277,23,0	1/1:0,10:10:20.83:144,21,0
chr10	54674390	.	C	CA	4149.12	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-3.606;DP=569;FS=4.629;HRun=7;HaplotypeScore=80.9605;InbreedingCoeff=0.9831;MQ=80.14;MQ0=1;MQRankSum=-3.729;QD=31.20;ReadPosRankSum=1.936;VQSLOD=3.7620;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,22:25:57.17:679,57,0	0/0:11,0:11:30.04:0,30,290	0/0:35,0:29:46.09:0,46,497	0/0:30,0:24:6.34:0,6,255	0/0:32,0:32:87.11:0,87,833	0/0:11,0:11:33.04:0,33,313	0/0:17,0:17:39.06:0,39,377	0/0:23,0:23:60.09:0,60,579	0/0:16,0:16:42.06:0,42,406	0/0:23,0:23:66.11:0,66,637	0/0:23,0:23:66.09:0,66,631	1/1:2,17:19:48.15:580,48,0	1/1:2,17:19:51.16:616,51,0	0/0:14,0:14:33.05:0,33,318	0/0:19,0:19:54.09:0,54,522	0/0:18,0:18:45.07:0,45,435	1/1:3,10:11:33.10:398,33,0	1/1:2,14:16:45.14:543,45,0	0/0:32,0:32:78.10:0,78,745	0/0:26,0:26:66.10:0,66,636	0/0:12,0:12:30.05:0,30,289	1/1:0,12:12:36.11:435,36,0	1/1:3,13:16:45.12:522,45,0	1/1:0,12:13:32.97:377,33,0	0/0:20,0:21:56.12:0,56,527	0/0:37,0:37:99:0,105,1010	0/0:25,0:24:60.09:0,60,579	0/0:10,0:10:27.04:0,27,261
chr10	54675791	.	C	CGTGTGTGT	4610.10	PASS	AB=0.724;AC=41;AF=0.759;AN=54;BaseQRankSum=-2.770;DP=698;FS=2.497;HRun=0;HaplotypeScore=215.8168;InbreedingCoeff=0.5453;MQ=63.10;MQ0=8;MQRankSum=-4.900;QD=8.54;ReadPosRankSum=-3.541;VQSLOD=3.4060;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:41,0:41:12:221,12,0	1/1:13,0:16:12.04:428,12,0	0/0:27,0:19:3.01:0,3,71	./.	1/1:25,0:32:3.01:74,3,0	1/1:14,0:20:14.86:232,15,0	1/1:22,0:25:5.98:141,6,0	1/1:26,0:24:24.06:359,24,0	1/1:15,0:22:3.01:64,3,0	1/1:20,0:25:21.03:245,21,0	1/1:14,0:25:6.02:117,6,0	1/1:17,0:14:2.98:22,3,0	1/1:24,0:27:5.64:205,6,0	0/1:13,0:29:0.06:0,0,0	0/1:14,0:31:0.70:232,0,1	1/1:21,1:27:6.02:222,6,0	1/1:20,0:22:21.04:626,21,0	1/1:17,0:23:12.04:417,12,0	0/0:14,0:17:8.16:0,8,166	0/0:15,0:26:36.02:0,36,587	0/0:20,0:32:0.62:0,1,579	1/1:30,0:30:12.02:163,12,0	1/1:22,0:22:9.03:237,9,0	1/1:16,0:15:2.65:43,3,0	0/1:13,0:15:0:0,0,0	1/1:22,0:29:22.30:390,22,0	0/0:17,0:30:39.13:0,39,709	1/1:17,0:14:17.96:171,18,0
chr10	54677282	.	TCA	T	9987.43	PASS	AB=0.807;AC=27;AF=0.482;AN=56;BaseQRankSum=25.325;DP=2233;FS=31.072;HRun=0;HaplotypeScore=654.6112;InbreedingCoeff=-0.9253;MQ=48.32;MQ0=98;MQRankSum=-8.993;QD=4.61;ReadPosRankSum=-7.743;VQSLOD=-0.4680;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:59,7:63:64.43:64,0,1302	0/1:7,8:15:99:182,0,169	0/0:64,2:7:15.50:0,16,192	0/1:62,3:7:8.88:9,0,117	0/1:45,19:63:99:261,0,1334	0/1:46,16:61:99:466,0,1293	0/1:68,9:73:50.87:51,0,2228	0/1:107,8:101:99:178,0,2671	0/1:72,29:99:99:637,0,2184	0/1:69,25:91:99:666,0,2129	0/1:39,19:57:99:246,0,1263	0/1:93,30:120:99:677,0,2496	0/1:83,22:104:99:488,0,2111	0/1:58,28:86:99:580,0,1208	0/1:92,25:114:99:516,0,2946	0/1:41,45:85:99:1044,0,1198	0/1:56,10:66:99:169,0,1517	0/1:47,9:56:99:191,0,1177	0/1:37,7:36:99:195,0,819	0/1:58,20:77:99:242,0,2078	0/1:140,30:163:99:221,0,4448	0/1:49,31:80:99:520,0,1228	0/1:57,35:90:99:654,0,1535	0/1:61,14:74:99:188,0,1499	0/1:36,16:52:99:261,0,1289	0/1:87,19:103:99:516,0,2809	0/1:58,29:86:99:624,0,1874	0/1:20,6:24:99:141,0,833
chr10	54677331	.	CA	C	1403.60	PASS	AB=0.776;AC=16;AF=0.286;AN=56;BaseQRankSum=11.330;DP=828;FS=1.032;HRun=2;HaplotypeScore=251.1670;InbreedingCoeff=-0.4227;MQ=44.46;MQ0=16;MQRankSum=-9.337;QD=2.97;ReadPosRankSum=6.210;VQSLOD=-0.1020;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,4:23:10.57:0,11,233	0/0:1,0:1:2.98:0,3,22	0/0:42,1:19:50.48:0,50,708	0/0:34,1:16:23.19:0,23,498	0/1:17,13:29:32.84:33,0,538	0/1:18,4:21:11.80:12,0,330	0/0:17,4:20:35.91:0,36,437	0/1:57,11:59:99:155,0,1651	0/0:27,7:33:51.50:0,51,652	0/1:26,6:32:99:152,0,825	0/1:12,10:20:99:155,0,302	0/1:26,15:39:14.69:15,0,651	0/0:28,7:34:24.61:0,25,719	0/0:25,4:28:31.84:0,32,403	0/0:30,4:33:44.87:0,45,579	0/1:22,15:36:62.47:62,0,593	0/1:15,4:19:29.69:30,0,530	0/1:14,9:23:99:167,0,400	0/1:20,2:21:20.66:21,0,682	0/0:16,8:23:3.25:0,3,524	0/0:49,7:54:82.40:0,82,1140	0/1:15,15:30:99:255,0,373	0/1:21,11:31:99:143,0,470	0/0:18,2:19:19.39:0,19,224	0/1:15,7:22:41.64:42,0,393	0/1:27,7:32:99:202,0,632	0/1:22,7:28:53.46:53,0,744	0/1:7,3:8:62.71:63,0,117
chr10	54677399	.	T	TAC	12823.54	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-2.827;DP=455;FS=2.202;HRun=0;HaplotypeScore=351.4104;InbreedingCoeff=0.6827;MQ=38.49;MQ0=3;MQRankSum=-1.275;QD=28.95;ReadPosRankSum=0.660;VQSLOD=3.6761;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,0:12:15.82:189,16,0	1/1:6,0:6:18.05:245,18,0	0/0:5,0:1:2.88:0,3,15	0/0:6,0:4:8.53:0,9,57	1/1:11,0:11:21.05:297,21,0	1/1:18,0:18:12.72:453,13,0	1/1:17,0:16:20.72:423,21,0	1/1:5,11:16:11.47:363,11,0	1/1:29,0:28:54.81:822,55,0	1/1:28,0:27:81.27:1146,81,0	1/1:6,0:6:9.03:141,9,0	1/1:35,0:34:80.34:1205,80,0	1/1:18,5:23:22.27:441,22,0	1/1:18,0:18:37.72:633,38,0	1/1:23,0:22:54.63:737,55,0	1/1:17,0:17:45.15:645,45,0	1/1:11,0:11:24.55:336,25,0	1/1:6,0:6:15:164,15,0	1/1:8,0:8:18.02:213,18,0	1/1:14,4:19:45.15:663,45,0	1/1:28,0:28:32.62:532,33,0	1/1:16,9:26:45.05:647,45,0	1/1:13,1:15:32.71:479,33,0	1/1:13,0:12:4.49:88,4,0	1/1:11,0:11:30.09:419,30,0	1/1:23,0:23:64.34:813,64,0	1/1:21,0:21:47.01:654,47,0	1/1:2,0:2:6.02:76,6,0
chr10	54677632	.	T	TACACACAC	2144.99	PASS	AB=0.864;AC=14;AF=0.250;AN=56;BaseQRankSum=7.083;DP=797;FS=0.477;HRun=0;HaplotypeScore=254.1136;InbreedingCoeff=0.6237;MQ=55.90;MQ0=19;MQRankSum=-4.079;QD=8.48;ReadPosRankSum=1.115;VQSLOD=1.9957;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:37,0:40:14.48:389,0,14	0/1:5,0:5:0:0,0,0	0/0:39,0:12:29.77:0,30,443	0/0:49,0:24:49.93:0,50,924	0/0:27,0:27:46.17:0,46,459	0/0:27,0:27:31.92:0,32,493	0/0:23,0:23:52.87:0,53,666	0/0:40,0:39:86.03:0,86,1340	0/0:28,0:27:38.13:0,38,375	0/0:32,0:31:56.06:0,56,692	0/1:18,0:18:2.58:3,0,157	1/1:30,1:33:30.46:519,30,0	1/1:5,11:22:15.02:380,15,0	0/0:24,0:24:44.97:0,45,385	0/0:32,0:32:67.18:0,67,422	0/0:20,0:19:27.61:0,28,324	0/1:19,0:22:1.24:214,0,1	0/1:20,0:21:53.93:270,0,54	0/0:26,0:25:73.75:0,74,1541	0/0:23,0:23:63.19:0,63,1546	0/0:73,0:72:99:0,189,4109	1/1:17,2:19:16.78:168,17,0	0/1:9,17:31:0.07:0,0,0	1/1:34,3:37:13.98:368,14,0	0/0:28,0:27:48.74:0,49,428	0/0:20,0:20:46.58:0,47,540	0/0:21,0:21:54.12:0,54,1309	0/0:11,0:11:20.52:0,21,245
chr10	54677634	.	T	TACAC	9935.20	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=-0.143;DP=837;FS=6.841;HRun=0;HaplotypeScore=201.3544;InbreedingCoeff=0.8130;MQ=54.73;MQ0=19;MQRankSum=-2.756;QD=16.56;ReadPosRankSum=-0.821;VQSLOD=3.8857;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:47,0:46:19.31:386,19,0	0/0:0,0:5:0:0,0,0	0/0:37,0:11:3.01:0,3,46	0/0:50,0:23:11.87:0,12,164	1/1:9,16:26:31.98:733,32,0	1/1:20,7:29:35.55:608,36,0	1/1:15,6:25:11.78:229,12,0	1/1:38,8:47:50.29:567,50,0	1/1:11,16:27:23.78:518,24,0	1/1:10,18:32:68.44:1166,68,0	1/1:6,15:21:21.54:507,22,0	1/1:35,0:35:25.08:233,25,0	1/1:20,0:20:22.13:298,22,0	1/1:8,18:27:33.11:794,33,0	1/1:7,23:32:53.41:1239,53,0	1/1:11,4:23:6.02:144,6,0	1/1:23,0:22:7.85:188,8,0	1/1:24,0:24:42.35:593,42,0	0/0:28,0:27:5.47:0,5,571	0/0:19,0:23:60.14:0,60,824	0/0:68,0:72:72.61:0,73,1494	1/1:20,0:20:13.06:86,13,0	1/1:30,0:30:9.01:40,9,0	1/1:41,0:41:18.02:221,18,0	1/1:8,16:30:38.25:758,38,0	1/1:11,8:20:30.02:557,30,0	0/0:20,0:20:45.07:0,45,640	1/1:6,5:13:3.01:72,3,0
chr10	54680640	.	C	CAG	1237.84	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-0.967;DP=792;FS=14.505;HRun=0;HaplotypeScore=129.2614;InbreedingCoeff=0.9813;MQ=73.10;MQ0=9;MQRankSum=-0.844;QD=30.95;ReadPosRankSum=2.457;VQSLOD=4.7564;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,132,1617	1/1:3,9:12:27.09:447,27,0	0/0:60,0:33:47.62:0,48,617	0/0:87,0:46:11.83:0,12,395	0/0:24,0:24:54.16:0,54,673	0/0:28,0:28:63.20:0,63,801	0/0:23,0:23:57.16:0,57,709	0/0:38,0:38:81.21:0,81,991	0/0:18,0:18:48.15:0,48,611	0/0:28,0:28:63.19:0,63,792	0/0:19,0:19:48.14:0,48,596	0/0:17,0:17:42.12:0,42,519	0/0:17,0:17:45.13:0,45,557	0/0:17,0:17:36.10:0,36,443	0/0:24,0:23:66.21:0,66,838	1/1:4,24:28:22.37:911,22,0	0/0:43,0:43:99:0,111,1393	0/0:22,0:22:54.10:0,54,650	0/0:15,0:14:33.07:0,33,402	0/0:25,0:25:55.73:0,56,688	0/0:25,0:25:66.17:0,66,798	0/0:28,0:28:60.09:0,60,725	0/0:20,0:20:42.12:0,42,519	0/0:30,0:30:84.27:0,84,1068	0/0:21,0:21:57.16:0,57,710	0/0:29,0:29:81.26:0,81,1031	0/0:28,0:27:84.23:0,84,1039	0/0:13,0:13:39.12:0,39,495
chr10	54680679	.	AG	A	2697.25	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=7.595;DP=672;FS=7.953;HRun=9;HaplotypeScore=116.3247;InbreedingCoeff=0.9909;MQ=67.08;MQ0=4;MQRankSum=-1.458;QD=18.47;ReadPosRankSum=0.661;VQSLOD=2.7544;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,118,851	1/1:4,5:9:12:110,12,0	0/0:23,1:20:17.34:0,17,384	0/0:39,0:27:66.03:0,66,700	0/0:20,0:20:50.53:0,51,365	0/0:29,0:29:83.02:0,83,579	0/0:23,0:23:59.41:0,59,417	0/0:28,0:28:67.37:0,67,407	0/0:20,0:20:53.62:0,54,410	0/0:26,0:26:67.85:0,68,503	0/0:16,0:16:32.55:0,33,212	0/0:16,0:16:44.51:0,45,314	0/0:18,0:18:44.74:0,45,361	0/0:17,0:17:47.62:0,48,351	0/0:23,0:22:53.49:0,53,374	1/1:7,21:28:59.98:547,60,0	0/0:29,0:29:53.53:0,54,375	0/0:20,0:20:50.50:0,51,360	1/1:3,15:18:31.52:389,32,0	1/1:5,12:17:26.99:247,27,0	1/1:6,38:44:99:960,105,0	0/0:21,0:21:53.44:0,53,389	0/0:10,0:10:23.73:0,24,161	0/0:34,0:34:89.20:0,89,650	0/0:24,0:24:59.46:0,59,456	0/0:29,0:29:64.80:0,65,433	1/1:5,25:30:69.03:631,69,0	0/0:14,0:14:32.73:0,33,238
chr10	54682677	.	G	GA	2537	PASS	AB=0.776;AC=29;AF=0.518;AN=56;BaseQRankSum=2.432;DP=491;FS=2.137;HRun=13;HaplotypeScore=88.3645;InbreedingCoeff=0.3553;MQ=60.06;MQ0=10;MQRankSum=0.974;QD=7.69;ReadPosRankSum=0.489;VQSLOD=2.9675;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:13,31:47:31.99:413,0,32	1/1:4,2:6:3:28,3,0	0/0:23,0:4:2.92:0,3,20	0/1:18,0:12:3.89:55,0,4	0/1:19,0:19:19.40:19,0,98	0/0:24,0:27:42.57:0,43,279	0/1:16,2:23:15.51:16,0,167	0/0:21,1:29:28.87:0,29,295	0/0:12,0:12:14.79:0,15,103	0/0:9,0:9:7.96:0,8,60	0/0:12,0:11:20.78:0,21,144	1/1:6,11:17:3.44:174,3,0	1/1:6,9:15:6.45:203,6,0	0/0:14,1:16:0.88:0,1,142	0/0:14,0:14:24.95:0,25,165	1/1:1,9:11:11.18:133,11,0	1/1:1,16:20:16.53:344,17,0	1/1:4,17:25:23.05:351,23,0	1/1:10,2:21:29.35:192,29,0	1/1:12,3:25:14.20:163,14,0	0/1:4,2:10:10.70:11,0,15	1/1:6,7:13:1.17:120,1,0	0/1:6,8:14:8.57:72,0,9	1/1:4,14:18:33.51:308,34,0	0/1:4,4:9:16.87:17,0,36	0/0:13,0:14:22.79:0,23,149	1/1:5,1:14:18.19:105,18,0	0/0:5,0:4:5.93:0,6,41
chr10	54683126	.	T	TA	6594.24	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-15.945;DP=579;FS=1.099;HRun=7;HaplotypeScore=75.3988;InbreedingCoeff=0.9844;MQ=72.97;MQ0=0;MQRankSum=-1.261;QD=30.67;ReadPosRankSum=2.516;VQSLOD=5.0479;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,28:30:81.25:978,81,0	1/1:0,12:13:39.12:471,39,0	0/0:22,0:22:47.42:0,47,433	0/0:9,0:9:9.01:0,9,86	0/0:25,0:25:69.11:0,69,666	0/0:23,0:23:51.07:0,51,493	0/0:24,0:24:66.11:0,66,637	0/0:28,0:28:78.10:0,78,744	0/0:13,0:13:33.04:0,33,319	0/0:36,0:36:99:0,108,1036	0/0:14,0:14:39.06:0,39,377	1/1:4,24:28:66.20:797,66,0	1/1:2,15:17:51.15:610,51,0	0/0:16,0:16:36.05:0,36,348	0/0:21,0:21:60.10:0,60,579	1/1:1,13:14:10.16:406,10,0	1/1:2,26:28:72.22:869,72,0	1/1:1,27:28:66.20:797,66,0	0/0:22,0:22:63.03:0,63,587	0/0:15,0:15:45.07:0,45,434	0/0:14,0:14:39.05:0,39,371	1/1:5,13:18:42.13:506,42,0	1/1:3,15:18:42.13:507,42,0	1/1:2,19:21:54.17:652,54,0	0/0:15,0:15:39.04:0,39,376	0/0:24,0:24:66.11:0,66,638	0/0:27,0:26:63.09:0,63,608	0/0:16,0:16:36.05:0,36,348
chr10	54683331	.	GAA	G	1770.85	PASS	AB=0.856;AC=25;AF=0.446;AN=56;BaseQRankSum=2.405;DP=319;FS=11.425;HRun=13;HaplotypeScore=62.1682;InbreedingCoeff=0.7821;MQ=61.42;MQ0=17;MQRankSum=-0.267;QD=13.22;ReadPosRankSum=0.656;VQSLOD=1.0908;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:38:99:0,105,1400	0/0:4,0:4:9.03:0,9,130	0/0:9,0:6:17.98:0,18,208	0/1:8,0:9:3.56:4,0,79	1/1:1,13:15:23.68:215,24,0	1/1:3,4:5:12.02:116,12,0	1/1:4,11:15:23.94:282,24,0	1/1:6,8:12:20.94:196,21,0	1/1:1,5:6:15.01:145,15,0	1/1:1,7:7:21.03:204,21,0	1/1:1,4:5:2.89:79,3,0	0/0:11,0:9:24.07:0,24,328	0/0:8,0:8:18.06:0,18,251	1/1:1,4:6:14.76:128,15,0	1/1:1,8:9:11.96:116,12,0	0/1:6,1:7:14.07:14,0,140	0/0:27,0:29:68.71:0,69,949	0/0:16,0:19:47.57:0,48,582	0/0:14,0:19:41.53:0,42,415	0/0:4,0:5:15.04:0,15,171	0/0:5,0:8:21.03:0,21,212	0/0:6,0:6:18.06:0,18,260	0/0:5,0:4:12.04:0,12,168	0/0:12,0:12:24.50:0,24,307	1/1:2,8:10:22.34:229,22,0	1/1:4,7:9:21.01:204,21,0	0/0:3,0:7:15.03:0,15,152	0/1:5,3:5:0.08:50,0,0
chr10	54685405	.	C	CA	9597.98	PASS	AC=46;AF=0.958;AN=48;BaseQRankSum=-2.980;DP=292;FS=0.000;HRun=5;HaplotypeScore=25.7926;InbreedingCoeff=0.6489;MQ=65.99;MQ0=0;MQRankSum=-2.980;QD=33.68;ReadPosRankSum=1.968;VQSLOD=4.2691;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,18:19:48.16:632,48,0	1/1:0,7:7:21.07:276,21,0	./.	0/0:5,0:6:9.41:0,9,81	1/1:2,13:15:39.13:513,39,0	1/1:1,16:17:39.13:513,39,0	1/1:0,4:4:12.04:158,12,0	1/1:5,25:30:75.23:971,75,0	1/1:0,2:2:6.02:79,6,0	1/1:3,14:17:45.14:576,45,0	1/1:0,11:11:33.11:433,33,0	1/1:1,4:5:6.02:79,6,0	./.	1/1:4,3:7:12.04:154,12,0	1/1:3,5:8:15.05:197,15,0	1/1:0,5:5:12.04:158,12,0	1/1:1,17:18:51.17:671,51,0	1/1:0,24:23:69.22:908,69,0	1/1:1,10:11:33.09:414,33,0	1/1:2,12:14:36.12:474,36,0	1/1:3,3:6:12.03:143,12,0	./.	1/1:0,3:3:9.03:118,9,0	./.	1/1:3,16:19:36.12:474,36,0	1/1:0,14:14:42.14:553,42,0	1/1:0,13:13:36.12:473,36,0	1/1:0,16:16:48.16:632,48,0
chr10	54685561	.	T	TGCTTC	32440.59	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-2.795;DP=456;FS=0.723;HRun=0;HaplotypeScore=90.8809;InbreedingCoeff=0.9721;MQ=82.89;MQ0=0;MQRankSum=-10.010;QD=77.61;ReadPosRankSum=3.817;VQSLOD=6.8785;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,25:31:69.24:2157,69,0	1/1:0,6:6:18.06:598,18,0	0/0:16,0:16:48.16:0,48,1091	0/0:22,0:22:62.64:0,63,1170	1/1:0,16:16:38.95:1040,39,0	1/1:3,15:20:54.18:1643,54,0	1/1:2,19:25:63.22:1982,63,0	1/1:4,19:28:81.22:2289,81,0	1/1:4,11:17:36.12:1150,36,0	1/1:1,7:8:24.08:806,24,0	1/1:0,8:9:18.06:530,18,0	1/1:1,12:14:36.12:1192,36,0	1/1:1,20:23:54.19:1789,54,0	1/1:4,8:14:30.10:988,30,0	1/1:7,12:20:51.17:1476,51,0	1/1:3,9:12:33.11:1072,33,0	1/1:2,17:20:51.17:1583,51,0	1/1:2,17:21:51.18:1641,51,0	1/1:2,4:6:15.05:400,15,0	1/1:0,12:13:39.13:1204,39,0	1/1:3,19:24:60.20:1611,60,0	1/1:0,8:8:21.07:697,21,0	1/1:1,5:6:18.06:535,18,0	1/1:1,13:18:36.12:1131,36,0	1/1:2,14:17:45.15:1371,45,0	1/1:2,14:17:48.14:1491,48,0	1/1:2,14:17:48.16:1470,48,0	1/1:0,7:8:18.06:598,18,0
chr10	54686222	.	AT	A	7284.81	PASS	AB=0.708;AC=32;AF=0.571;AN=56;BaseQRankSum=-18.246;DP=640;FS=1.001;HRun=10;HaplotypeScore=86.3308;InbreedingCoeff=0.8663;MQ=74.32;MQ0=0;MQRankSum=-0.667;QD=20.07;ReadPosRankSum=-0.829;VQSLOD=5.1490;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,142,808	0/0:13,0:13:5.90:0,6,88	0/0:11,0:11:18:0,18,179	0/1:11,2:12:10.98:11,0,130	1/1:3,30:33:80.94:703,81,0	1/1:3,24:27:65.98:573,66,0	1/1:3,14:17:38.98:339,39,0	1/1:7,25:32:44.68:598,45,0	1/1:3,13:16:29.99:260,30,0	1/1:2,16:18:47.98:413,48,0	0/1:2,9:11:2.99:204,0,3	0/0:17,0:17:46.01:0,46,238	0/0:25,1:26:43.49:0,43,339	1/1:2,22:25:62.01:527,62,0	1/1:2,26:28:62.98:547,63,0	0/0:30,1:31:50.16:0,50,300	0/0:24,0:24:59.70:0,60,310	0/0:23,1:24:34.69:0,35,283	1/1:5,19:24:26.77:453,27,0	1/1:2,19:21:50.14:417,50,0	1/1:2,19:21:56.99:495,57,0	0/0:17,0:17:44.65:0,45,240	0/0:26,1:27:40.82:0,41,336	0/0:32,2:34:40.49:0,40,407	1/1:1,16:17:41.99:365,42,0	1/1:1,19:20:56.99:495,57,0	1/1:3,28:31:80.97:703,81,0	1/1:1,8:9:21:182,21,0
chr10	54686924	.	G	GTGTC	1765.86	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-2.950;DP=600;FS=1.782;HRun=0;HaplotypeScore=126.5141;InbreedingCoeff=0.9914;MQ=70.07;MQ0=3;MQRankSum=-0.688;QD=65.40;ReadPosRankSum=1.766;VQSLOD=5.5845;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,108,1963	1/1:0,5:5:15.05:392,15,0	0/0:23,0:20:54.17:0,54,912	0/0:20,0:20:51.13:0,51,817	0/0:22,0:22:57.18:0,57,1006	0/0:18,0:18:45.14:0,45,782	0/0:15,0:15:36.12:0,36,647	0/0:30,0:29:60.19:0,60,1045	0/0:17,0:17:48.15:0,48,836	0/0:25,0:25:60.19:0,60,1055	0/0:15,0:15:33.11:0,33,600	0/0:20,0:20:57.20:0,57,1036	0/0:25,0:25:66.23:0,66,1187	0/0:21,0:21:60.21:0,60,1091	0/0:26,0:26:72.25:0,72,1309	1/1:1,21:22:57.20:1492,57,0	0/0:34,0:34:93.28:0,93,1648	0/0:17,0:16:51.13:0,51,869	0/0:16,0:15:33.10:0,33,558	0/0:16,0:16:48.16:0,48,867	0/0:33,0:33:84.29:0,84,1508	0/0:14,0:14:39.12:0,39,678	0/0:18,0:18:45.14:0,45,787	0/0:34,0:34:87.27:0,87,1523	0/0:14,0:14:39.13:0,39,701	0/0:18,0:18:51.17:0,51,927	0/0:21,0:21:63.22:0,63,1145	0/0:16,0:16:48.16:0,48,872
chr10	54687005	.	AAAAAAAAAAAAAAG	A	2241.29	PASS	AB=0.981;AC=9;AF=0.161;AN=56;BaseQRankSum=8.929;DP=553;FS=15.697;HRun=0;HaplotypeScore=185.6678;InbreedingCoeff=0.1489;MQ=53.80;MQ0=7;MQRankSum=-5.481;QD=12.18;ReadPosRankSum=6.574;VQSLOD=1.2116;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:43,0:43:57.12:535,0,57	0/0:6,0:6:18.06:0,18,966	0/0:40,0:14:42.01:0,42,1237	0/0:23,0:8:18.53:0,19,444	0/0:17,0:17:46.71:0,47,1433	0/0:30,0:29:63.22:0,63,1668	0/0:19,0:18:48.08:0,48,1362	0/0:33,0:32:90.24:0,90,2386	0/0:8,0:8:24.08:0,24,632	0/0:27,0:26:75.26:0,75,2200	0/0:13,0:13:33.01:0,33,974	0/1:17,1:18:34.66:232,0,35	0/1:19,0:19:3.88:422,0,4	0/0:13,0:13:36.12:0,36,1111	0/0:16,0:16:45.15:0,45,1283	0/0:12,0:12:30.10:0,30,1310	0/1:30,0:29:99:192,0,121	0/1:9,0:9:9.47:141,0,9	0/0:17,0:17:29.96:0,30,1610	0/0:15,0:15:42.14:0,42,1668	0/0:6,0:6:15.05:0,15,491	1/1:16,1:17:19.99:456,20,0	0/1:18,1:19:99:158,0,115	0/1:28,1:29:32.02:252,0,32	0/0:18,0:17:41.15:0,41,1037	0/0:25,0:25:75.26:0,75,1952	0/0:18,0:17:54.16:0,54,1709	0/0:13,0:12:24.06:0,24,579
chr10	54687006	.	AAAAAAAAAAAAAG	A	3504.57	PASS	AB=0.576;AC=14;AF=0.250;AN=56;BaseQRankSum=8.044;DP=557;FS=14.394;HRun=0;HaplotypeScore=174.4726;InbreedingCoeff=0.7632;MQ=53.75;MQ0=7;MQRankSum=-4.711;QD=19.05;ReadPosRankSum=6.106;VQSLOD=1.3600;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:12,31:43:6.78:818,7,0	0/0:6,0:6:18.06:0,18,900	0/0:40,0:14:42.06:0,42,1070	0/0:22,0:8:18.52:0,19,370	0/0:17,0:17:46.67:0,47,1226	0/0:31,0:30:66.17:0,66,1436	0/0:19,0:18:46.38:0,46,1148	0/0:33,0:32:87.26:0,87,1983	0/0:8,0:8:24.04:0,24,556	0/0:30,0:29:84.27:0,84,1994	0/0:13,0:13:32.69:0,33,821	1/1:6,12:18:8.91:307,9,0	1/1:3,15:18:17.67:609,18,0	0/0:13,0:13:36.12:0,36,988	0/0:16,0:16:45.15:0,45,1097	0/0:13,0:13:33.11:0,33,1218	0/1:8,22:29:78.28:279,0,78	1/1:9,1:10:20.10:307,20,0	0/0:18,0:18:32.93:0,33,1465	0/0:14,0:14:42.14:0,42,1487	0/0:6,0:6:15.05:0,15,430	1/1:1,16:17:35.57:580,36,0	0/1:5,14:19:67.16:233,0,67	1/1:8,21:29:11.76:371,12,0	0/0:18,0:17:37.92:0,38,857	0/0:25,0:25:75.22:0,75,1689	0/0:18,0:17:54.15:0,54,1543	0/0:12,0:11:21.07:0,21,454
chr10	54687140	.	GCGCTTGCCTAGCAA	G	1550.50	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=4.659;DP=441;FS=1.005;HRun=0;HaplotypeScore=193.4919;InbreedingCoeff=0.8355;MQ=47.11;MQ0=9;MQRankSum=-3.042;QD=96.91;ReadPosRankSum=-1.452;VQSLOD=3.0959;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:25:69.24:0,69,4491	1/1:3,6:9:27.09:914,27,0	0/0:3,0:1:3.01:0,3,92	0/0:12,0:1:3.01:0,3,69	0/0:23,0:23:60.16:0,60,3821	0/0:24,0:23:66.23:0,66,4180	0/0:17,0:17:42.14:0,42,2564	0/0:19,0:17:48.16:0,48,2989	0/0:12,0:12:30.10:0,30,1995	0/0:23,0:23:66.23:0,66,4279	0/0:15,0:15:39.13:0,39,2606	0/0:13,0:12:36.11:0,36,2403	0/0:15,0:15:42.14:0,42,2957	0/0:9,0:9:21.07:0,21,1501	0/0:17,0:16:45.15:0,45,2960	1/1:1,6:7:18.06:756,18,0	0/0:36,0:35:99:0,105,6658	0/0:21,0:21:63.22:0,63,4244	0/0:14,0:12:33.07:0,33,1879	0/0:13,0:13:39.13:0,39,2805	0/0:12,0:12:33.11:0,33,2261	0/0:22,0:22:60.19:0,60,4110	0/0:15,0:15:45.15:0,45,2875	0/0:13,0:11:21.05:0,21,1322	0/0:12,0:12:30.10:0,30,1935	0/0:14,0:14:42.10:0,42,2827	0/0:13,0:12:36.12:0,36,2518	0/0:12,0:12:33.11:0,33,2071
chr10	54687166	.	TG	T	5826.52	PASS	AC=28;AF=0.519;AN=54;BaseQRankSum=11.643;DP=447;FS=1.739;HRun=4;HaplotypeScore=96.2822;InbreedingCoeff=0.9510;MQ=46.59;MQ0=14;MQRankSum=-6.288;QD=29.13;ReadPosRankSum=-1.341;VQSLOD=3.8475;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:32:75.25:0,75,1038	1/1:1,5:6:15:164,15,0	0/0:14,0:3:3.47:0,3,27	./.	1/1:1,18:19:45.07:521,45,0	1/1:1,19:19:54.17:647,54,0	1/1:2,14:15:36.11:431,36,0	1/1:1,23:24:63.19:751,63,0	1/1:2,10:11:27.07:312,27,0	1/1:3,15:18:48.14:567,48,0	1/1:0,16:16:39.04:435,39,0	0/0:15,0:13:33.07:0,33,439	0/0:16,0:16:45.14:0,45,608	1/1:0,12:12:27.08:324,27,0	1/1:2,13:14:36.10:422,36,0	1/1:2,4:6:9.03:108,9,0	0/0:31,0:30:84.18:0,84,1110	0/0:20,0:20:60.17:0,60,810	0/0:18,0:17:45.06:0,45,579	0/0:17,0:17:45.15:0,45,624	0/0:13,0:13:30.08:0,30,402	0/0:19,0:18:51.17:0,51,714	0/0:16,0:16:45.15:0,45,624	0/0:8,0:7:6.02:0,6,84	1/1:0,14:14:33.10:392,33,0	1/1:0,11:11:33.10:396,33,0	0/0:16,0:15:42.14:0,42,586	1/1:1,10:11:30.09:357,30,0
chr10	54687187	.	G	GA	2434.05	PASS	AB=0.896;AC=26;AF=0.464;AN=56;BaseQRankSum=8.129;DP=482;FS=4.347;HRun=11;HaplotypeScore=155.1671;InbreedingCoeff=0.4849;MQ=43.93;MQ0=10;MQRankSum=-5.982;QD=8.54;ReadPosRankSum=-2.939;VQSLOD=0.6659;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,1:33:59.39:0,59,461	0/0:6,0:6:8.94:0,9,69	0/1:18,0:7:15.74:16,0,40	0/1:9,0:2:0:0,0,0	0/1:19,6:26:3.78:100,0,4	1/1:7,9:15:30.06:302,30,0	1/1:8,8:16:9.33:245,9,0	1/1:21,10:29:50.37:420,50,0	0/1:10,4:13:2.15:161,0,2	1/1:12,8:20:33.02:317,33,0	1/1:11,8:20:22.56:225,23,0	0/1:13,1:12:16.09:16,0,96	0/0:13,0:13:14.65:0,15,164	1/1:5,9:14:12.35:191,12,0	1/1:6,7:13:18.65:189,19,0	0/0:8,0:8:14.75:0,15,106	0/0:26,1:27:16.37:0,16,300	0/0:18,0:18:44.82:0,45,348	0/0:19,0:18:26.71:0,27,208	0/0:19,0:20:38.79:0,39,302	0/1:13,1:14:12.54:13,0,98	0/0:18,0:18:16.54:0,17,135	0/1:19,1:20:11.19:11,0,139	0/0:8,0:7:11.94:0,12,93	1/1:6,10:16:26.76:250,27,0	1/1:8,3:11:11.99:112,12,0	0/0:24,0:23:6.56:0,7,278	0/1:8,3:11:51.18:63,0,51
chr10	54687206	.	G	GAAA	10186.68	PASS	AB=0.514;AC=51;AF=0.911;AN=56;BaseQRankSum=-1.176;DP=488;FS=0.000;HRun=9;HaplotypeScore=146.0242;InbreedingCoeff=0.6717;MQ=44.61;MQ0=1;MQRankSum=-0.789;QD=22.05;ReadPosRankSum=-0.126;VQSLOD=1.8690;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:13,1:32:71.04:559,71,0	1/1:3,2:6:15.02:219,15,0	0/0:19,0:10:12.46:0,12,133	0/0:7,0:3:4.25:0,4,30	1/1:10,6:16:29.22:417,29,0	1/1:6,4:10:21.51:369,22,0	1/1:14,7:21:45.01:683,45,0	1/1:23,8:31:58.88:730,59,0	1/1:7,5:12:24:376,24,0	1/1:12,10:22:57.12:902,57,0	1/1:12,5:17:32.91:491,33,0	1/1:4,0:13:31.73:241,32,0	1/1:5,0:9:14.87:130,15,0	1/1:7,8:15:38.93:575,39,0	1/1:11,8:17:39.01:624,39,0	1/1:7,4:12:27.07:457,27,0	1/1:15,1:32:77.25:608,77,0	1/1:15,1:22:41.56:351,42,0	1/1:2,0:21:23.34:85,23,0	0/1:1,0:19:12.93:36,0,13	1/1:1,0:12:13.44:29,13,0	1/1:6,0:16:29.66:215,30,0	1/1:6,0:17:42.95:353,43,0	1/1:7,0:11:17.68:124,18,0	1/1:8,13:21:45.06:813,45,0	1/1:10,5:15:29.84:392,30,0	1/1:3,0:23:19.94:44,20,0	1/1:6,3:11:24.03:365,24,0
chr10	54687221	.	C	CG	14832.34	PASS	AB=1.000;AC=45;AF=0.804;AN=56;BaseQRankSum=3.749;DP=505;FS=0.000;HRun=0;HaplotypeScore=105.6876;InbreedingCoeff=0.8786;MQ=64.08;MQ0=0;MQRankSum=-7.487;QD=36.53;ReadPosRankSum=1.596;VQSLOD=4.4288;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,23:26:66.17:1000,66,0	1/1:0,5:5:12.04:185,12,0	0/1:23,0:16:0.52:1,0,325	0/0:11,0:8:0.38:0,0,152	1/1:2,15:17:39.13:608,39,0	1/1:0,10:10:30.10:474,30,0	1/1:1,21:22:57.11:865,57,0	1/1:1,28:27:78.22:1160,78,0	1/1:0,11:11:29.89:441,30,0	1/1:3,21:24:66.12:956,66,0	1/1:2,13:15:44.96:635,45,0	1/1:2,17:18:44.98:653,45,0	1/1:2,10:12:24.08:372,24,0	1/1:0,9:9:27:373,27,0	1/1:1,19:19:39.05:577,39,0	1/1:0,16:16:45.15:711,45,0	1/1:2,27:28:74.98:1092,75,0	1/1:2,17:19:57.19:894,57,0	0/0:28,0:28:78.17:0,78,1015	0/0:18,0:18:54.17:0,54,732	0/0:16,0:16:48.09:0,48,628	1/1:2,13:15:36.08:538,36,0	1/1:0,17:17:47.95:695,48,0	1/1:1,14:14:30.10:473,30,0	1/1:1,17:18:31.21:735,31,0	1/1:0,23:23:60.16:872,60,0	0/0:25,0:25:69.22:0,69,943	1/1:0,11:12:36.03:523,36,0
chr10	54688611	.	GT	G	362.10	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.882;DP=677;FS=0.835;HRun=1;HaplotypeScore=87.9517;InbreedingCoeff=0.9964;MQ=84.09;MQ0=0;MQRankSum=-3.947;QD=17.24;ReadPosRankSum=1.179;VQSLOD=3.9380;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,110,1514	1/1:1,6:7:20.32:155,20,0	0/0:18,0:18:51.08:0,51,714	0/0:23,0:23:66.01:0,66,893	0/0:17,0:17:51.17:0,51,815	0/0:28,0:28:84.29:0,84,1332	0/0:25,0:25:75.22:0,75,1141	0/0:25,0:25:72.23:0,72,1109	0/0:33,0:33:99:0,99,1582	0/0:30,0:30:90.31:0,90,1435	0/0:15,0:15:45.15:0,45,719	0/0:32,0:32:96.05:0,96,1446	0/0:33,0:33:89.79:0,90,1266	0/0:25,0:25:75.24:0,75,1165	0/0:17,0:17:51.15:0,51,789	1/1:2,12:14:41.78:327,42,0	0/0:25,0:25:72.16:0,72,1130	0/0:18,0:18:53.97:0,54,815	0/0:24,0:24:69.24:0,69,1103	0/0:23,0:23:66.22:0,66,1030	0/0:39,0:39:99:0,114,1813	0/0:24,0:24:72.17:0,72,1077	0/0:15,0:15:44.98:0,45,646	0/0:26,0:26:75.02:0,75,1131	0/0:25,0:25:75.16:0,75,1076	0/0:29,0:29:84.28:0,84,1321	0/0:41,0:41:99:0,123,1948	0/0:9,0:9:24.08:0,24,373
chr10	54689160	.	CG	C	2601.41	PASS	AC=8;AF=0.154;AN=52;BaseQRankSum=3.575;DP=366;FS=4.855;HRun=1;HaplotypeScore=47.3919;InbreedingCoeff=0.9692;MQ=45.32;MQ0=31;MQRankSum=1.504;QD=35.15;ReadPosRankSum=0.148;VQSLOD=3.3093;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:19:39.13:0,39,615	0/0:12,0:12:20.74:0,21,334	./.	./.	0/0:10,0:9:20.94:0,21,323	0/0:11,0:10:30.10:0,30,477	0/0:15,0:15:42.14:0,42,667	0/0:21,0:17:39.13:0,39,609	0/0:11,0:10:30.10:0,30,476	0/0:16,0:15:45.15:0,45,703	0/0:3,0:3:9.03:0,9,143	0/0:16,0:15:45.15:0,45,713	0/0:7,0:7:18.06:0,18,286	0/0:14,0:13:36.12:0,36,565	0/0:5,0:4:12.04:0,12,188	0/0:14,0:14:39.13:0,39,619	0/0:15,0:13:36.12:0,36,573	0/0:20,0:17:45.15:0,45,716	1/1:3,18:18:54.18:751,54,0	1/1:0,16:16:48.16:669,48,0	1/1:1,15:15:45.15:629,45,0	0/0:13,0:13:36.12:0,36,570	0/0:13,0:12:27.09:0,27,428	0/0:11,0:10:27.09:0,27,428	0/0:10,0:9:27.09:0,27,427	0/0:19,0:16:48.15:0,48,738	1/1:0,21:21:51.16:710,51,0	0/0:11,0:10:27.09:0,27,431
chr10	54689214	.	A	ACC	184.06	PASS	AB=0.885;AC=8;AF=0.143;AN=56;BaseQRankSum=0.623;DP=409;FS=20.577;HRun=0;HaplotypeScore=71.9168;InbreedingCoeff=-0.1598;MQ=42.86;MQ0=26;MQRankSum=-3.074;QD=1.36;ReadPosRankSum=-1.037;VQSLOD=0.0065;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:38,0:33:9.39:9,0,325	0/0:4,0:4:11.96:0,12,103	0/0:21,0:2:2.21:0,2,9	0/0:10,0:3:4.33:0,4,37	0/0:17,0:17:47.60:0,48,567	0/0:14,0:13:36.11:0,36,477	0/0:12,0:12:32.75:0,33,404	0/0:30,0:30:72.67:0,73,908	0/0:8,0:8:24.08:0,24,327	0/0:18,0:18:51.14:0,51,708	0/0:14,0:14:38.77:0,39,466	0/1:12,6:19:99:109,0,263	0/1:8,1:9:25.83:33,0,26	0/0:15,0:14:42.13:0,42,555	0/0:13,0:13:36.10:0,36,505	0/0:10,0:10:29.34:0,29,291	0/1:18,3:17:40.54:41,0,338	0/1:17,0:16:22.33:22,0,243	0/0:19,0:17:46.70:0,47,626	0/0:15,0:15:36.04:0,36,418	0/0:5,0:5:15.05:0,15,202	0/1:5,0:5:30.97:31,0,101	0/1:9,1:10:29.71:30,0,128	0/1:10,3:13:15.41:42,0,15	0/0:5,0:4:12.01:0,12,137	0/0:12,0:11:33.11:0,33,436	0/0:17,0:16:44.57:0,45,545	0/0:15,0:13:33.11:0,33,456
chr10	54689469	.	CT	C	709.22	PASS	AB=1.000;AC=6;AF=0.107;AN=56;BaseQRankSum=5.571;DP=665;FS=0.000;HRun=1;HaplotypeScore=101.2725;InbreedingCoeff=0.6702;MQ=80.18;MQ0=0;MQRankSum=-3.365;QD=12.23;ReadPosRankSum=-1.800;VQSLOD=1.4237;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:61.24:0,61,345	1/1:0,4:4:9.03:121,9,0	0/0:30,0:29:43.11:0,43,1066	0/0:26,0:25:69.19:0,69,1004	0/0:28,0:28:84.27:0,84,1280	0/0:23,0:23:69.22:0,69,1050	0/0:22,0:22:66.20:0,66,983	0/0:33,0:33:96.31:0,96,1443	0/0:24,0:24:72.19:0,72,1049	0/0:19,0:19:57.16:0,57,819	0/0:25,0:25:75.16:0,75,1108	0/0:24,0:24:37.63:0,38,379	0/0:16,0:16:35.17:0,35,259	0/0:28,0:28:84.26:0,84,1266	0/0:37,0:37:99:0,108,1613	1/1:0,24:24:50.83:700,51,0	0/0:30,0:30:54.23:0,54,397	0/0:30,1:31:9.41:0,9,372	0/0:18,0:18:52.42:0,52,800	0/0:27,0:27:81.24:0,81,1198	0/0:26,0:26:78.08:0,78,985	0/1:20,0:20:3.21:3,0,222	0/1:10,0:10:3.95:4,0,85	0/0:30,0:30:43.89:0,44,386	0/0:19,0:19:57.18:0,57,869	0/0:24,0:24:72.23:0,72,1103	0/0:28,0:28:84.15:0,84,1209	0/0:14,0:14:36.11:0,36,541
chr10	54689648	.	TC	T	1063.20	PASS	AB=0.654;AC=3;AF=0.054;AN=56;BaseQRankSum=9.144;DP=701;FS=4.573;HRun=1;HaplotypeScore=135.3543;InbreedingCoeff=-0.0707;MQ=74.36;MQ0=0;MQRankSum=-4.711;QD=14.37;ReadPosRankSum=-0.391;VQSLOD=3.0559;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:11,9:20:99:249,0,304	0/1:5,12:17:99:395,0,181	0/0:23,0:23:69.18:0,69,1001	0/0:19,0:19:51.03:0,51,723	0/0:33,0:33:99:0,99,1503	0/0:29,0:29:84.27:0,84,1320	0/0:18,0:18:54.15:0,54,816	0/0:32,0:32:96.29:0,96,1450	0/0:29,0:29:87.30:0,87,1390	0/0:24,0:24:72.24:0,72,1132	0/0:24,0:24:72.23:0,72,1126	0/0:30,0:30:62.89:0,63,676	0/0:23,0:23:27.02:0,27,263	0/0:32,0:32:96.33:0,96,1534	0/0:31,0:31:93.30:0,93,1463	0/1:20,17:37:99:520,0,840	0/0:9,0:9:15.04:0,15,216	0/0:14,0:14:8.62:0,9,343	0/0:16,0:16:48.16:0,48,759	0/0:37,0:37:99:0,111,1687	0/0:32,0:32:96.26:0,96,1440	0/0:30,0:29:19.67:0,20,648	0/0:38,0:38:1.61:0,2,722	0/0:15,0:15:8.39:0,8,119	0/0:19,0:19:57.19:0,57,906	0/0:23,0:23:69.23:0,69,1082	0/0:26,0:25:75.26:0,75,1199	0/0:21,0:21:63.17:0,63,937
chr10	54689650	.	T	TTCTTACTGTATA	16688.80	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-1.341;DP=720;FS=8.501;HRun=0;HaplotypeScore=257.0485;InbreedingCoeff=0.9839;MQ=74.19;MQ0=0;MQRankSum=-13.985;QD=64.19;ReadPosRankSum=3.474;VQSLOD=2.9541;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:22:48.16:1627,48,0	1/1:18,0:18:50.74:1207,51,0	0/0:22,0:22:51.17:0,51,1182	0/0:20,0:21:33.11:0,33,744	0/0:31,0:31:78.27:0,78,2396	0/0:29,0:29:75.26:0,75,2369	0/0:18,0:18:51.16:0,51,1354	0/0:32,0:32:78.26:0,78,1873	0/0:29,0:29:78.25:0,78,2266	0/0:23,0:23:57.19:0,57,1670	0/0:24,0:24:66.21:0,66,1916	1/1:9,22:34:51.17:2929,51,0	1/1:1,20:26:24.08:1438,24,0	0/0:33,0:33:84.29:0,84,2689	0/0:30,0:30:75.26:0,75,2540	1/1:38,0:38:99:2348,104,0	1/1:4,5:11:12.04:497,12,0	1/1:7,7:16:15.05:845,15,0	0/0:16,0:16:39.13:0,39,1174	0/0:36,0:36:99:0,99,2946	0/0:29,0:29:87.30:0,87,2737	1/1:10,22:35:48.16:2381,48,0	1/1:14,24:40:57.20:2877,57,0	1/1:6,11:19:9:539,9,0	0/0:20,0:20:54.16:0,54,1665	0/0:23,0:23:63.22:0,63,1949	0/0:26,0:25:78.23:0,78,2467	0/0:18,0:18:54.19:0,54,1662
chr10	54690782	.	AAAG	A	368.87	PASS	AC=4;AF=0.074;AN=54;BaseQRankSum=4.484;DP=306;FS=8.966;HRun=0;HaplotypeScore=63.9869;InbreedingCoeff=0.6501;MQ=68.91;MQ0=0;MQRankSum=-1.938;QD=26.35;ReadPosRankSum=-0.819;VQSLOD=2.7656;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:21:0,21,76	1/1:0,1:1:3.01:48,3,0	0/0:1,0:1:3.01:0,3,38	0/0:11,0:9:7.62:0,8,183	./.	0/0:26,0:26:72.25:0,72,1551	0/0:15,0:15:42.14:0,42,909	0/0:28,0:28:72.24:0,72,1515	0/0:12,0:12:30.10:0,30,639	0/0:6,0:6:15.05:0,15,320	0/0:7,0:7:18.06:0,18,392	0/0:11,0:11:16.09:0,16,93	0/0:11,0:11:14.46:0,14,100	0/0:9,0:9:24.08:0,24,524	0/0:15,0:15:42.12:0,42,838	1/1:1,12:13:27.09:428,27,0	0/0:19,0:19:34.17:0,34,212	0/0:12,0:12:20.03:0,20,115	0/0:26,0:26:66.23:0,66,1442	0/0:4,0:4:9.02:0,9,156	0/0:12,0:12:36.12:0,36,786	0/0:2,0:2:1.25:0,1,3	0/0:3,0:3:2.02:0,2,7	0/0:13,0:13:20.90:0,21,81	0/0:4,0:4:12.04:0,12,261	0/0:12,0:12:36.12:0,36,764	0/0:9,0:9:24.08:0,24,525	0/0:6,0:6:18.06:0,18,393
chr10	54690789	.	AAGCCC	A	4291.65	PASS	AC=16;AF=0.296;AN=54;BaseQRankSum=8.593;DP=299;FS=1.099;HRun=0;HaplotypeScore=62.2221;InbreedingCoeff=0.9005;MQ=79.10;MQ0=0;MQRankSum=-3.800;QD=52.34;ReadPosRankSum=4.276;VQSLOD=4.8063;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,14:15:33.11:716,33,0	0/0:1,0:1:3.01:0,3,36	0/0:4,0:4:12.04:0,12,275	0/0:16,0:14:32.69:0,33,628	./.	0/0:24,0:24:69.22:0,69,2091	0/0:16,0:16:48.15:0,48,1440	0/0:27,0:27:75.26:0,75,2176	0/0:11,0:11:33.11:0,33,986	0/0:6,0:6:18.06:0,18,528	0/0:6,0:6:18.06:0,18,513	1/1:1,10:11:27.09:583,27,0	1/1:1,10:11:24.08:521,24,0	0/0:8,0:8:24.08:0,24,761	0/0:12,0:12:36.12:0,36,1041	0/0:13,0:13:30.08:0,30,395	1/1:2,15:17:39.13:847,39,0	1/1:1,11:12:30.10:651,30,0	0/0:25,0:25:69.24:0,69,2143	0/0:2,0:2:6.02:0,6,190	0/0:13,0:13:39.13:0,39,1213	1/1:0,1:1:3.01:65,3,0	1/1:0,3:3:9.03:195,9,0	1/1:0,12:12:33.11:713,33,0	0/0:6,0:6:15.04:0,15,392	0/0:12,0:12:33.11:0,33,965	0/0:9,0:9:27.09:0,27,844	0/0:6,0:6:18.06:0,18,571
chr10	54690924	.	GT	G	1174.92	PASS	AB=0.899;AC=22;AF=0.393;AN=56;BaseQRankSum=5.420;DP=363;FS=4.083;HRun=14;HaplotypeScore=47.5040;InbreedingCoeff=0.7108;MQ=78.81;MQ0=0;MQRankSum=1.580;QD=7.25;ReadPosRankSum=3.780;VQSLOD=2.1975;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,21:29:44.94:286,45,0	1/1:2,3:5:5.94:41,6,0	0/0:30,0:23:26.12:0,26,180	0/1:27,0:20:10.86:11,0,92	0/0:9,0:9:24.01:0,24,216	0/1:12,3:15:11.12:11,0,189	0/0:12,1:16:23.98:0,24,329	0/0:22,0:22:26.94:0,27,236	0/0:12,1:13:12.44:0,12,253	0/0:12,0:12:24.03:0,24,223	0/0:3,0:3:6.01:0,6,56	1/1:4,13:16:6:161,6,0	1/1:3,4:7:8.91:62,9,0	0/0:6,0:6:9:0,9,80	0/0:10,1:11:10.02:0,10,197	1/1:3,8:13:24.86:156,25,0	1/1:1,11:13:31.77:211,32,0	1/1:2,11:13:29.75:206,30,0	0/0:25,0:25:53.90:0,54,467	0/0:2,0:2:3:0,3,28	0/0:6,0:7:17.86:0,18,154	1/1:2,2:4:5.92:41,6,0	1/1:0,2:2:5.94:41,6,0	1/1:4,11:16:22.62:150,23,0	0/0:6,0:6:12.01:0,12,111	0/0:18,0:18:30.02:0,30,275	0/0:12,0:12:6.43:0,6,195	0/0:9,0:9:20.96:0,21,185
chr10	54691296	.	AC	A	362.17	PASS	AC=2;AF=0.038;AN=52;BaseQRankSum=0.887;DP=311;FS=0.000;HRun=1;HaplotypeScore=106.9148;InbreedingCoeff=0.5692;MQ=80.23;MQ0=0;MQRankSum=-2.479;QD=30.18;ReadPosRankSum=1.014;VQSLOD=3.3716;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:63.19:0,63,978	./.	0/0:12,0:12:34.32:0,34,500	0/0:8,0:8:21.82:0,22,304	0/0:2,0:2:6.02:0,6,96	0/0:6,0:6:12.04:0,12,192	0/0:15,0:15:36.12:0,36,574	0/0:12,0:12:33.11:0,33,526	0/0:7,0:7:21.07:0,21,335	0/0:8,0:8:18.06:0,18,287	0/0:3,0:3:6.02:0,6,96	0/0:13,0:13:36.12:0,36,574	0/0:11,0:11:24.08:0,24,380	0/0:11,0:11:27.09:0,27,429	0/0:14,0:14:33.11:0,33,526	1/1:0,12:12:33.11:456,33,0	0/0:31,0:30:63.15:0,63,962	0/0:27,0:27:69.24:0,69,1100	0/0:8,0:8:18.06:0,18,279	0/0:4,0:4:6.02:0,6,89	0/0:29,0:29:54.18:0,54,859	0/0:6,0:6:18.06:0,18,286	0/0:2,0:2:3.01:0,3,48	0/0:25,0:25:60.20:0,60,945	0/0:5,0:5:12.04:0,12,191	0/0:5,0:5:15.05:0,15,240	0/0:4,0:4:6.02:0,6,96	./.
chr10	54691506	.	T	TACTTGATAGC	3664.75	PASS	AC=20;AF=0.417;AN=48;BaseQRankSum=-3.357;DP=168;FS=67.666;HRun=0;HaplotypeScore=48.6637;InbreedingCoeff=0.8060;MQ=86.96;MQ0=0;MQRankSum=-6.729;QD=76.35;ReadPosRankSum=2.049;VQSLOD=0.6026;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,4:10:12.04:626,12,0	1/1:2,0:2:3.01:137,3,0	0/0:10,0:9:27.09:0,27,782	0/0:9,0:9:15.20:0,15,576	0/0:3,0:3:9.03:0,9,290	0/0:10,0:10:30.06:0,30,871	0/0:6,0:6:18.06:0,18,579	0/0:19,0:19:54.19:0,54,1726	0/0:8,0:8:24.08:0,24,775	0/0:7,0:7:21.07:0,21,680	0/0:7,0:7:15.05:0,15,429	1/1:1,2:4:6.02:313,6,0	./.	0/0:5,0:5:9.03:0,9,288	0/0:10,0:10:27.09:0,27,864	./.	1/1:2,1:5:6.02:312,6,0	1/1:2,2:4:9.03:431,9,0	1/1:5,2:7:21.07:781,21,0	1/1:1,0:1:2.98:21,3,0	1/1:5,1:7:6.02:313,6,0	1/1:2,1:3:6.02:313,6,0	./.	1/1:2,3:5:9.03:417,9,0	0/0:5,0:5:15.05:0,15,470	0/0:9,0:9:24.08:0,24,760	./.	0/0:3,0:3:9.03:0,9,268
chr10	54692884	.	T	TA	3050.91	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-3.863;DP=339;FS=19.527;HRun=8;HaplotypeScore=30.9199;InbreedingCoeff=0.9519;MQ=58.67;MQ0=9;MQRankSum=1.369;QD=23.11;ReadPosRankSum=1.421;VQSLOD=1.9216;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,30:32:78.11:856,78,0	1/1:1,4:6:14.87:172,15,0	0/0:8,0:6:18.01:0,18,164	0/0:4,0:3:5.96:0,6,55	0/0:12,0:12:33.01:0,33,302	0/0:12,0:12:33.02:0,33,302	0/0:11,0:11:32.97:0,33,294	0/0:26,0:25:68.93:0,69,609	0/0:11,0:10:27.01:0,27,247	0/0:8,0:7:21.01:0,21,191	0/0:11,0:11:33.02:0,33,302	1/1:1,8:8:24.07:277,24,0	1/1:1,9:10:24.07:277,24,0	0/0:12,0:12:33:0,33,297	0/0:11,0:11:33.02:0,33,302	1/1:1,5:6:12.04:138,12,0	1/1:2,14:16:24.07:277,24,0	1/1:4,12:14:36.05:404,36,0	0/0:19,0:16:44.98:0,45,403	0/0:8,0:7:21.01:0,21,192	0/0:20,0:16:45.02:0,45,412	1/1:0,2:2:6.02:69,6,0	1/1:1,11:11:27.08:312,27,0	1/1:0,18:18:42.12:485,42,0	0/0:8,0:8:21.01:0,21,192	0/0:9,0:8:21:0,21,189	0/0:5,0:5:12.01:0,12,110	0/0:12,0:11:33.02:0,33,302
chr10	54693111	.	C	CCTT	9291.72	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=9.552;DP=619;FS=0.000;HRun=0;HaplotypeScore=97.1781;InbreedingCoeff=0.9931;MQ=75.29;MQ0=1;MQRankSum=-3.646;QD=42.24;ReadPosRankSum=5.976;VQSLOD=6.0601;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,0:40:81.21:1312,81,0	1/1:1,6:7:21.07:463,21,0	0/0:45,0:37:76.79:0,77,1122	0/0:59,0:40:50.46:0,50,1050	0/0:14,0:14:36.12:0,36,578	0/0:18,0:18:51.13:0,51,791	0/0:25,0:25:60.17:0,60,920	0/0:29,0:29:63.21:0,63,983	0/0:17,0:17:51.16:0,51,796	0/0:22,0:22:66.23:0,66,1059	0/0:10,0:10:30.02:0,30,427	1/1:2,0:22:51.17:867,51,0	1/1:3,0:28:72.18:1189,72,0	0/0:20,0:20:57.17:0,57,871	0/0:18,0:18:54.18:0,54,867	1/1:1,22:24:60.16:1278,60,0	1/1:3,0:24:60.20:986,60,0	1/1:0,0:25:66.23:1109,66,0	0/0:20,0:20:48.13:0,48,740	0/0:14,0:14:42.09:0,42,603	0/0:33,0:33:99:0,99,1587	1/1:0,0:16:48.16:843,48,0	1/1:0,0:7:11.72:208,12,0	1/1:1,0:27:66.22:1037,66,0	0/0:12,0:12:33.06:0,33,468	0/0:20,0:20:54.18:0,54,868	0/0:16,0:16:42.12:0,42,648	0/0:6,0:6:18.06:0,18,289
chr10	54695146	.	T	TTTTC	307.32	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=5.500;DP=542;FS=1.460;HRun=0;HaplotypeScore=96.2382;InbreedingCoeff=0.1899;MQ=52.70;MQ0=34;MQRankSum=-2.147;QD=3.41;ReadPosRankSum=3.657;VQSLOD=1.7536;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:32:46.34:0,46,419	0/1:8,0:6:12.61:59,0,13	0/0:22,0:8:9.07:0,9,47	0/0:15,0:6:4.23:0,4,51	0/0:26,0:24:60:0,60,464	0/0:10,0:10:19.65:0,20,189	0/0:20,0:17:24.20:0,24,272	0/0:37,0:35:58.18:0,58,439	0/0:19,0:19:45.39:0,45,362	0/0:24,0:24:62.25:0,62,533	0/0:16,0:14:19.59:0,20,250	0/0:12,0:11:26.64:0,27,193	0/0:11,0:8:17.36:0,17,123	0/0:17,0:15:31.81:0,32,246	0/0:26,0:26:30.74:0,31,271	1/1:2,17:18:15.52:308,16,0	0/0:28,0:27:50.50:0,50,317	0/0:19,0:18:18.13:0,18,178	0/0:23,0:18:29.10:0,29,270	0/0:20,0:20:29.62:0,30,258	0/1:8,0:6:3.47:3,0,75	0/0:13,0:13:10.78:0,11,107	0/1:15,0:13:4.54:5,0,140	0/1:14,0:12:39.78:40,0,69	0/0:24,0:25:29.92:0,30,457	0/0:25,0:24:62.25:0,62,504	0/1:25,0:21:17.21:17,0,242	0/0:9,0:8:11.57:0,12,123
chr10	54695148	.	T	TTC	109.62	PASS	AB=0.667;AC=3;AF=0.054;AN=56;BaseQRankSum=4.265;DP=536;FS=0.824;HRun=0;HaplotypeScore=79.2284;InbreedingCoeff=0.5224;MQ=50.03;MQ0=37;MQRankSum=-1.229;QD=3.78;ReadPosRankSum=2.379;VQSLOD=1.8871;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:31:82.27:0,82,528	0/1:4,4:6:23.59:74,0,24	0/0:19,0:5:8.61:0,9,47	0/0:15,0:6:4.22:0,4,52	0/0:26,0:24:65.48:0,65,496	0/0:10,0:10:15.96:0,16,166	0/0:21,0:18:34.59:0,35,270	0/0:33,0:31:69.23:0,69,569	0/0:19,0:19:46.07:0,46,386	0/0:23,0:23:67.56:0,68,554	0/0:16,0:14:19.72:0,20,233	0/0:12,0:11:26.82:0,27,204	0/0:11,0:8:18.79:0,19,143	0/0:17,0:15:31.62:0,32,231	0/0:26,0:26:24.45:0,24,240	1/1:21,0:18:15:137,15,0	0/0:29,0:27:53.02:0,53,361	0/0:19,0:18:31.31:0,31,284	0/0:20,0:15:35.09:0,35,306	0/0:20,0:20:45.37:0,45,328	0/0:9,0:6:16.66:0,17,112	0/0:13,0:13:24.23:0,24,149	0/0:15,0:13:28.13:0,28,202	0/0:14,0:12:20.50:0,20,126	0/0:25,0:25:57.38:0,57,498	0/0:25,0:24:64.06:0,64,500	0/0:25,0:22:46.12:0,46,343	0/0:10,0:9:11.63:0,12,123
chr10	54695558	.	CAT	C	1578.74	PASS	AB=0.904;AC=19;AF=0.352;AN=54;BaseQRankSum=7.265;DP=599;FS=2.673;HRun=0;HaplotypeScore=119.0075;InbreedingCoeff=0.4947;MQ=59.79;MQ0=15;MQRankSum=-7.096;QD=7.41;ReadPosRankSum=-1.137;VQSLOD=3.2767;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,13:24:14.81:134,15,0	0/1:2,1:3:39.58:40,0,55	0/0:12,0:5:9.47:0,9,130	0/0:21,0:7:9:0,9,119	0/0:18,0:17:15.19:0,15,227	0/0:14,0:14:18.03:0,18,264	0/1:36,3:39:99:119,0,686	0/0:31,0:31:80.51:0,81,1226	0/0:25,0:25:25.74:0,26,329	0/0:31,0:31:36.84:0,37,1379	0/1:8,1:9:33.43:33,0,104	1/1:2,25:23:27.01:381,27,0	1/1:2,11:11:12.69:249,13,0	0/0:30,0:30:41.01:0,41,692	0/0:23,0:23:26.01:0,26,463	0/1:15,0:15:6.14:6,0,666	1/1:2,13:15:24.07:352,24,0	1/1:1,14:13:18.02:254,18,0	0/0:22,0:22:60.04:0,60,1032	0/0:13,0:13:5.91:0,6,120	0/0:82,0:81:81.03:0,81,1356	1/1:3,3:6:2.92:17,3,0	./.	1/1:13,17:27:1.74:22,2,0	0/0:18,0:18:30.09:0,30,523	0/0:17,0:17:16.02:0,16,735	0/0:22,0:22:60.18:0,60,944	0/1:15,1:15:99:155,0,410
chr10	54695560	.	T	TGTGC	4083.04	PASS	AB=0.848;AC=36;AF=0.667;AN=54;BaseQRankSum=-2.014;DP=647;FS=2.989;HRun=0;HaplotypeScore=148.3885;InbreedingCoeff=0.4258;MQ=58.09;MQ0=15;MQRankSum=-1.538;QD=8.76;ReadPosRankSum=-1.577;VQSLOD=2.5013;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:29:0.10:0,0,0	1/1:4,0:4:3.01:71,3,0	0/0:12,0:5:2.96:0,3,19	0/0:22,0:7:2.81:0,3,21	0/1:5,13:17:2.59:107,0,3	1/1:12,1:13:9:124,9,0	0/1:42,0:42:33.08:335,0,33	1/1:39,0:39:68.20:532,68,0	0/1:24,1:25:20.39:178,0,20	1/1:12,19:33:56.73:534,57,0	1/1:7,0:7:6.91:134,7,0	1/1:27,0:24:20.79:125,21,0	1/1:18,0:16:17.44:109,17,0	1/1:13,18:34:12:189,12,0	0/1:9,16:25:44.29:69,0,44	1/1:20,0:20:38.64:372,39,0	1/1:18,0:18:22.46:189,22,0	1/1:16,0:15:11.57:67,12,0	0/0:22,0:22:38.24:0,38,307	0/0:13,0:14:2.24:0,2,8	0/0:81,0:81:21.02:0,21,202	0/1:7,0:7:0:0,0,0	./.	1/1:32,0:31:2.60:10,3,0	1/1:9,9:19:0.67:131,1,0	1/1:18,0:18:44.96:459,45,0	0/0:23,0:23:51.77:0,52,457	1/1:16,0:15:19.95:349,20,0
chr10	54695570	.	TGC	T	1024.30	PASS	AB=0.909;AC=13;AF=0.241;AN=54;BaseQRankSum=-5.582;DP=644;FS=1.792;HRun=0;HaplotypeScore=131.1371;InbreedingCoeff=0.4801;MQ=55.91;MQ0=17;MQRankSum=1.700;QD=4.03;ReadPosRankSum=-0.558;VQSLOD=2.9710;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:33,0:32:4.73:21,5,0	0/0:5,0:5:12.02:0,12,147	0/0:10,0:4:2.99:0,3,25	0/0:19,0:5:8.48:0,8,46	0/0:18,0:17:2.54:0,3,168	0/1:15,0:15:0.41:0,0,160	0/0:42,0:42:56.75:0,57,689	0/0:30,1:31:48.98:0,49,714	0/0:30,0:30:26.80:0,27,302	0/0:31,0:31:63.25:0,63,737	0/0:6,0:6:7.84:0,8,79	0/0:27,0:22:13.73:0,14,109	0/0:18,0:16:17.85:0,18,111	0/0:26,0:26:17.86:0,18,177	0/0:23,0:23:22.91:0,23,231	0/0:21,0:21:38.73:0,39,373	0/0:25,0:24:19.07:0,19,121	0/0:18,0:15:3.67:0,4,110	1/1:23,0:23:52.82:478,53,0	1/1:2,12:14:2.96:19,3,0	0/1:14,68:81:57.93:178,0,58	./.	0/1:6,0:5:0:0,0,0	0/1:33,0:30:0:0,0,1	0/0:17,0:16:17.88:0,18,207	0/1:24,0:24:22.24:22,0,395	1/1:24,0:24:42.66:452,43,0	0/0:16,0:15:23.21:0,23,418
chr10	54695572	.	CGT	C	207.35	PASS	AB=0.971;AC=16;AF=0.308;AN=52;BaseQRankSum=-0.154;DP=659;FS=1.888;HRun=0;HaplotypeScore=134.7272;InbreedingCoeff=0.1045;MQ=53.09;MQ0=18;MQRankSum=0.782;QD=0.64;ReadPosRankSum=-0.630;VQSLOD=2.4068;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:30,3:32:5.51:66,6,0	0/0:6,0:6:8.43:0,8,68	./.	0/0:20,0:4:0:0,0,0	0/0:21,0:20:14.15:0,14,127	0/1:15,0:15:18.38:18,0,96	0/0:43,0:43:46.15:0,46,503	0/0:32,0:32:10.68:0,11,204	0/0:33,0:33:29.69:0,30,294	0/0:30,0:31:35.17:0,35,348	0/1:7,0:7:11.10:11,0,38	0/1:27,1:23:6.08:6,0,26	0/0:17,0:15:2.94:0,3,18	0/0:25,0:25:11.72:0,12,93	0/0:25,0:25:11.05:0,11,247	0/0:20,0:20:17.75:0,18,120	0/1:25,1:25:10.37:10,0,20	0/1:16,2:15:40.06:53,0,40	1/1:24,0:24:6.50:42,7,0	1/1:14,0:14:2.04:6,2,0	0/1:79,1:79:90.30:90,0,119	./.	0/1:6,0:5:0:0,0,0	0/1:33,0:32:0:0,0,0	0/0:21,0:20:20.78:0,21,161	0/0:23,0:25:25.10:0,25,325	0/1:25,0:25:9.93:10,0,69	0/1:15,2:16:34.23:34,0,283
chr10	54695574	.	T	TGC	3089.76	PASS	AB=0.848;AC=27;AF=0.500;AN=54;BaseQRankSum=-1.455;DP=658;FS=7.082;HRun=0;HaplotypeScore=129.5511;InbreedingCoeff=-0.0986;MQ=51.81;MQ0=17;MQRankSum=-0.954;QD=6.44;ReadPosRankSum=3.855;VQSLOD=2.6368;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:27,7:33:3.87:58,0,4	0/1:6,0:6:20.54:27,0,21	0/0:10,0:2:2.96:0,3,19	0/0:18,0:3:2.98:0,3,21	0/1:20,1:20:16.79:94,0,17	0/1:4,12:16:27.57:163,0,28	0/1:20,22:43:99:271,0,193	1/1:30,0:30:5.82:357,6,0	0/1:13,20:33:99:175,0,121	0/1:27,0:27:99:327,0,100	1/1:10,1:10:9.86:84,10,0	1/1:20,5:22:2.27:122,2,0	1/1:7,11:16:17.44:142,17,0	1/1:22,2:24:12.01:165,12,0	0/1:23,0:23:20.17:20,0,196	1/1:14,6:20:21.28:325,21,0	0/1:15,13:28:5.91:146,0,6	0/1:16,2:15:9.80:115,0,10	0/0:24,0:24:24.29:0,24,316	0/0:14,0:14:2.98:0,3,22	0/0:80,0:79:22.92:0,23,306	./.	0/1:6,0:5:0:0,0,0	0/1:16,18:32:0:0,0,0	0/1:16,3:18:32.57:179,0,33	0/1:26,0:26:99:308,0,154	0/0:27,0:27:62.65:0,63,515	0/1:17,0:16:70.48:168,0,70
chr10	54695935	.	TTA	T	1646.05	PASS	AC=16;AF=0.308;AN=52;BaseQRankSum=9.399;DP=286;FS=9.046;HRun=0;HaplotypeScore=42.0996;InbreedingCoeff=0.8485;MQ=73.73;MQ0=1;MQRankSum=-1.156;QD=20.32;ReadPosRankSum=2.721;VQSLOD=2.8543;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,8:11:12.04:150,12,0	1/1:0,5:5:9.03:117,9,0	0/0:10,0:6:0.46:0,0,1	0/0:15,0:7:10.37:0,10,92	0/0:10,0:9:14.99:0,15,245	0/0:13,0:13:39.13:0,39,654	0/0:2,0:2:3.01:0,3,51	0/0:44,0:44:99:0,108,1794	0/0:9,0:9:18.06:0,18,306	0/0:7,0:7:9.03:0,9,153	0/0:6,0:6:14.97:0,15,221	1/1:4,6:10:15.04:176,15,0	1/1:4,5:9:12.04:150,12,0	0/0:6,0:6:15.02:0,15,212	0/0:3,0:3:6.02:0,6,102	1/1:1,8:9:18.06:234,18,0	1/1:5,17:22:50.75:629,51,0	1/1:1,8:9:24.08:312,24,0	0/0:14,0:14:24.08:0,24,407	0/0:6,0:6:18.05:0,18,263	0/0:5,0:5:12.04:0,12,199	./.	1/1:6,0:6:6.01:64,6,0	./.	0/0:18,0:18:42.12:0,42,678	0/0:8,0:8:21.06:0,21,331	0/0:10,0:10:18.06:0,18,293	0/0:16,0:16:33.11:0,33,561
chr10	54696379	.	G	GGTT	11695.22	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-14.214;DP=653;FS=2.796;HRun=0;HaplotypeScore=83.9809;InbreedingCoeff=0.9930;MQ=82.52;MQ0=0;MQRankSum=-5.061;QD=48.53;ReadPosRankSum=3.729;VQSLOD=7.2185;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,49:55:99:2440,117,0	1/1:3,7:10:24.08:489,24,0	0/0:18,0:18:15.88:0,16,520	0/0:21,0:21:39.78:0,40,642	0/0:25,0:25:63.20:0,63,946	0/0:20,0:20:54.18:0,54,834	0/0:23,0:23:60.10:0,60,854	0/0:32,0:32:84.25:0,84,1200	0/0:22,0:22:60.13:0,60,851	0/0:32,0:32:69.23:0,69,1048	0/0:22,0:22:48.12:0,48,655	1/1:2,18:21:57.20:1188,57,0	1/1:2,28:31:84.29:1776,84,0	0/0:23,0:23:51.17:0,51,789	0/0:38,0:38:93.32:0,93,1439	1/1:2,24:26:57.20:1224,57,0	1/1:2,25:27:60.21:1288,60,0	1/1:0,13:14:39.13:829,39,0	0/0:16,0:16:33.09:0,33,470	0/0:16,0:16:42.10:0,42,581	0/0:17,0:17:39.11:0,39,562	1/1:5,9:14:30.02:524,30,0	1/1:3,17:20:45.15:965,45,0	1/1:4,19:23:48.16:973,48,0	0/0:22,0:22:57.16:0,57,835	0/0:35,0:35:75.25:0,75,1138	0/0:26,0:26:72.24:0,72,1111	0/0:4,0:4:12.04:0,12,186
chr10	54696633	.	CT	C	6771.04	PASS	AB=0.875;AC=29;AF=0.518;AN=56;BaseQRankSum=16.750;DP=673;FS=9.164;HRun=10;HaplotypeScore=83.4153;InbreedingCoeff=0.9255;MQ=66.64;MQ0=0;MQRankSum=0.164;QD=19.97;ReadPosRankSum=2.531;VQSLOD=5.4621;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,31:37:86.92:747,87,0	1/1:2,18:20:53.99:469,54,0	0/1:18,3:12:21.38:21,0,163	0/0:14,0:9:14.31:0,14,91	0/0:31,1:32:55.16:0,55,834	0/0:30,0:30:75.18:0,75,820	0/0:17,0:17:42.11:0,42,460	0/0:28,1:28:22.07:0,22,464	0/0:27,1:28:37.12:0,37,638	0/0:38,0:38:99:0,99,1082	0/0:34,0:35:81.05:0,81,875	1/1:1,16:17:47.99:417,48,0	1/1:1,17:18:44.99:391,45,0	0/0:13,0:13:39.10:0,39,424	0/0:16,0:16:39.10:0,39,427	1/1:3,21:24:56.98:495,57,0	1/1:2,29:31:65.97:573,66,0	1/1:3,26:29:59.02:607,59,0	1/1:4,11:15:29.97:257,30,0	1/1:4,38:42:99:989,114,0	1/1:4,7:11:23.48:191,23,0	1/1:0,13:13:35.99:313,36,0	1/1:2,17:19:47.88:416,48,0	1/1:2,20:22:50.99:443,51,0	0/0:34,1:35:64.17:0,64,920	0/0:32,0:32:87.24:0,87,962	1/1:1,19:20:50.99:443,51,0	0/0:15,0:15:42:0,42,421
chr10	54697433	.	G	GT	8148.88	PASS	AB=0.778;AC=52;AF=0.929;AN=56;BaseQRankSum=-6.606;DP=486;FS=4.863;HRun=9;HaplotypeScore=65.9613;InbreedingCoeff=0.4396;MQ=81.38;MQ0=6;MQRankSum=-5.107;QD=18.48;ReadPosRankSum=3.850;VQSLOD=5.2177;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,23:26:50.63:539,51,0	1/1:4,0:11:28.79:173,29,0	0/0:43,0:21:28.85:0,29,237	0/1:41,1:21:24.44:24,0,119	1/1:2,17:20:56.98:586,57,0	1/1:4,22:26:28.09:538,28,0	1/1:3,15:18:21.23:350,21,0	1/1:6,15:22:45:470,45,0	1/1:1,10:11:29.75:309,30,0	1/1:5,12:17:33.03:335,33,0	1/1:3,10:13:32.09:345,32,0	1/1:1,0:13:31.32:157,31,0	1/1:2,0:10:17.04:86,17,0	1/1:4,8:12:18.05:199,18,0	1/1:3,12:15:4.04:263,4,0	1/1:5,0:15:17.41:215,17,0	1/1:6,1:19:40.23:238,40,0	1/1:3,0:10:29.02:183,29,0	1/1:7,11:18:39.10:422,39,0	1/1:0,15:16:45.53:483,46,0	0/1:3,8:11:2:197,0,2	1/1:4,0:10:11.40:58,11,0	1/1:1,0:7:17.04:85,17,0	1/1:0,0:6:10.25:65,10,0	1/1:1,20:23:42.98:523,43,0	1/1:1,19:20:56.93:601,57,0	1/1:0,13:13:27.07:299,27,0	1/1:3,14:17:16.07:405,16,0
chr10	54697450	.	TA	T	233.68	PASS	AB=0.952;AC=6;AF=0.107;AN=56;BaseQRankSum=6.486;DP=509;FS=3.598;HRun=13;HaplotypeScore=95.9511;InbreedingCoeff=0.5460;MQ=81.68;MQ0=9;MQRankSum=-4.013;QD=3.65;ReadPosRankSum=0.875;VQSLOD=1.3987;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:20,1:22:5.91:6,0,267	1/1:4,6:10:20.87:153,21,0	0/0:48,0:20:6.95:0,7,97	0/0:50,0:25:12.79:0,13,100	0/0:21,2:24:13.58:0,14,434	0/0:24,0:24:27.04:0,27,263	0/0:17,0:17:36.05:0,36,345	0/0:24,0:24:47.75:0,48,410	0/0:8,0:8:21.01:0,21,194	0/0:18,0:19:42.03:0,42,392	0/0:12,0:14:31.84:0,32,314	0/0:11,0:11:27.01:0,27,254	0/0:10,0:11:17.83:0,18,151	0/0:11,0:11:23.92:0,24,203	0/0:14,1:15:5.14:0,5,212	1/1:3,11:14:26.81:197,27,0	0/1:17,1:18:2.90:3,0,277	0/0:12,0:12:20.97:0,21,188	0/0:22,0:22:34.26:0,34,454	0/0:16,0:16:30.05:0,30,290	0/0:9,0:9:15.02:0,15,146	0/0:6,0:6:8.95:0,9,76	0/0:9,0:10:0.18:0,0,139	0/0:9,0:9:18:0,18,164	0/0:24,0:24:36.06:0,36,350	0/0:26,0:26:48.08:0,48,467	0/0:19,0:19:28.26:0,28,254	0/0:15,0:15:33.03:0,33,310
chr10	54697649	.	T	TTA	7619.22	PASS	AB=0.538;AC=19;AF=0.339;AN=56;BaseQRankSum=-9.196;DP=491;FS=7.243;HRun=0;HaplotypeScore=55.9054;InbreedingCoeff=0.9389;MQ=66.16;MQ0=0;MQRankSum=-0.645;QD=46.74;ReadPosRankSum=3.402;VQSLOD=6.2496;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,25:27:72.16:1399,72,0	0/1:1,0:7:2.86:111,0,3	0/0:4,0:3:9.02:0,9,110	0/0:13,0:13:24.24:0,24,371	0/0:26,0:26:78.24:0,78,1213	0/0:21,0:21:63.16:0,63,926	0/0:16,0:16:48.14:0,48,726	0/0:35,0:35:99:0,102,1455	0/0:13,0:13:39.13:0,39,632	0/0:18,0:18:54.17:0,54,847	0/0:16,0:16:48.16:0,48,773	1/1:0,11:11:30.10:606,30,0	1/1:1,15:16:42.14:839,42,0	0/0:14,0:14:42.13:0,42,637	0/0:22,0:22:66.20:0,66,1021	1/1:0,0:17:42.27:313,42,0	1/1:1,16:19:48.16:969,48,0	1/1:1,17:19:49.19:1026,49,0	0/0:24,0:23:66.15:0,66,931	0/0:19,0:19:57.16:0,57,873	0/0:15,0:15:45.09:0,45,632	1/1:0,14:14:36.12:729,36,0	1/1:0,14:14:36.12:700,36,0	1/1:0,19:19:48.11:928,48,0	0/0:19,0:19:57.19:0,57,922	0/0:23,0:23:69.22:0,69,1095	0/0:18,0:18:51.13:0,51,762	0/0:12,0:12:36.12:0,36,582
chr10	54698207	.	GGA	G	60.15	PASS	AB=0.818;AC=7;AF=0.135;AN=52;BaseQRankSum=1.678;DP=350;FS=0.000;HRun=0;HaplotypeScore=71.3633;InbreedingCoeff=0.0439;MQ=62.40;MQ0=14;MQRankSum=-3.027;QD=0.88;ReadPosRankSum=-2.451;VQSLOD=1.0844;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:45.04:0,45,627	./.	0/0:32,0:15:24.87:0,25,302	0/0:47,0:25:31.55:0,32,456	0/0:14,0:14:8.87:0,9,122	0/0:8,2:10:20.54:0,21,285	0/0:15,0:14:9.13:0,9,272	0/0:14,0:14:24.01:0,24,375	0/1:10,3:13:62.33:62,0,141	0/0:9,0:7:15.52:0,16,256	0/0:9,1:8:3.66:0,4,129	0/0:14,0:12:16.60:0,17,269	0/0:6,1:7:11.65:0,12,106	0/1:11,4:14:6.99:7,0,200	0/1:12,1:13:15.10:15,0,313	0/0:8,0:8:23.96:0,24,325	0/0:8,0:6:9.03:0,9,158	0/0:5,0:5:12.04:0,12,201	0/1:5,1:5:28.49:28,0,121	0/0:16,0:16:14.57:0,15,236	0/0:12,0:9:11.97:0,12,176	0/0:11,1:12:15.93:0,16,228	0/0:7,1:8:5.89:0,6,104	0/0:11,0:11:15.05:0,15,257	1/1:11,3:13:4.17:42,4,0	0/0:9,1:9:12.72:0,13,161	0/1:4,3:7:26:26,0,101	./.
chr10	54698221	.	G	GGA	173.92	PASS	AB=0.947;AC=6;AF=0.115;AN=52;BaseQRankSum=2.637;DP=253;FS=0.000;HRun=0;HaplotypeScore=63.2773;InbreedingCoeff=0.1942;MQ=52.21;MQ0=12;MQRankSum=-1.756;QD=3.16;ReadPosRankSum=2.792;VQSLOD=1.2707;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:12,1:13:52.04:52,0,97	./.	0/0:19,0:7:3.51:0,4,42	0/1:27,0:12:15.19:15,0,82	0/0:10,0:10:3.01:0,3,41	0/0:10,0:10:16.20:0,16,165	0/0:10,0:9:13.56:0,14,116	0/0:9,0:9:14.81:0,15,151	0/0:11,0:11:15.53:0,16,108	0/0:9,0:7:11.25:0,11,115	0/0:8,0:6:3.01:0,3,41	0/0:9,0:7:14.35:0,14,110	0/0:5,0:5:4.68:0,5,24	0/0:14,0:13:20.81:0,21,190	0/0:11,0:11:16.73:0,17,140	1/1:1,4:5:11.52:210,12,0	0/0:7,0:6:9.45:0,9,77	0/0:6,0:6:10.85:0,11,61	0/0:5,0:3:6.01:0,6,66	0/0:11,0:11:3.89:0,4,99	0/0:9,0:6:2.84:0,3,41	0/0:12,0:12:3.76:0,4,49	0/0:7,0:7:2.98:0,3,21	0/0:6,0:6:8.95:0,9,70	1/1:9,0:8:1.75:5,2,0	0/0:5,0:4:11.62:0,12,73	0/0:5,0:5:6.02:0,6,72	./.
chr10	54700124	.	A	AGTGTGTGT	2575.13	PASS	AB=0.741;AC=29;AF=0.558;AN=52;BaseQRankSum=-0.569;DP=521;FS=0.000;HRun=0;HaplotypeScore=143.7196;InbreedingCoeff=0.7200;MQ=59.51;MQ0=12;MQRankSum=-3.013;QD=8.85;ReadPosRankSum=-1.063;VQSLOD=2.4824;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:28:8.43:145,8,0	0/0:8,0:8:10.85:0,11,163	./.	./.	0/0:20,0:19:6.02:0,6,278	0/0:19,0:19:16.26:0,16,236	0/0:21,0:21:12.02:0,12,248	1/1:25,0:24:4.26:13,4,0	0/0:12,0:14:15.41:0,15,290	0/1:13,0:19:11.26:53,0,11	1/1:13,0:13:8.78:68,9,0	1/1:14,0:14:15.05:376,15,0	1/1:13,0:12:12.04:256,12,0	0/0:17,0:19:12.28:0,12,230	0/0:22,0:22:12.04:0,12,297	0/0:18,0:18:15.02:0,15,217	1/1:22,5:28:6.02:184,6,0	1/1:14,7:24:12.98:421,13,0	1/1:21,0:21:15.47:187,15,0	1/1:14,0:14:2.89:60,3,0	1/1:22,0:21:6.02:159,6,0	1/1:7,7:14:6.02:189,6,0	1/1:14,0:14:8.92:180,9,0	1/1:22,0:21:18.46:323,18,0	0/0:20,0:20:17.97:0,18,337	0/0:13,0:15:10.42:0,10,267	1/1:17,0:17:8.89:156,9,0	0/0:9,0:10:5.87:0,6,80
chr10	54700161	.	G	GTGTGTG	1616.35	PASS	AC=28;AF=0.560;AN=50;BaseQRankSum=-0.466;DP=494;FS=0.000;HRun=0;HaplotypeScore=117.0914;InbreedingCoeff=0.7519;MQ=58.52;MQ0=16;MQRankSum=-0.391;QD=6.36;ReadPosRankSum=-4.297;VQSLOD=0.2273;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:35,0:34:5.84:99,6,0	0/0:5,0:5:11.63:0,12,143	./.	./.	0/0:17,0:16:6.02:0,6,232	0/0:19,0:19:14.71:0,15,206	0/0:15,0:15:12.91:0,13,208	1/1:24,0:23:3.85:11,4,0	0/0:12,0:12:13.39:0,13,224	1/1:20,0:19:11.21:73,11,0	1/1:11,0:11:8.93:68,9,0	1/1:9,0:9:12.04:254,12,0	1/1:12,0:11:3.48:75,3,0	0/0:21,0:21:11.66:0,12,187	0/0:17,0:17:12.03:0,12,241	0/0:16,0:16:15.02:0,15,175	./.	1/1:17,0:16:6.49:139,6,0	1/1:11,0:11:16.25:151,16,0	1/1:8,5:14:3.01:81,3,0	1/1:23,0:22:6.01:159,6,0	1/1:24,0:24:6.01:102,6,0	1/1:11,0:11:9.03:181,9,0	1/1:26,0:25:17.97:233,18,0	0/0:20,0:20:17.97:0,18,282	0/0:15,0:15:9.02:0,9,211	1/1:17,0:17:9:177,9,0	0/0:9,0:7:5.90:0,6,66
chr10	54700167	.	GTA	G	480.22	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=2.932;DP=459;FS=4.352;HRun=0;HaplotypeScore=78.9743;InbreedingCoeff=0.4500;MQ=66.29;MQ0=12;MQRankSum=-3.246;QD=9.60;ReadPosRankSum=-2.943;VQSLOD=2.3695;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:32:11.75:0,12,204	1/1:2,4:6:15.03:207,15,0	0/0:29,0:22:59.14:0,59,594	0/0:26,0:18:40.36:0,40,489	0/0:19,0:18:30:0,30,474	0/0:20,0:20:50.61:0,51,526	0/0:12,0:12:30:0,30,404	0/0:24,0:23:57.01:0,57,535	0/0:11,1:12:7.64:0,8,230	0/0:15,0:14:30.67:0,31,281	0/1:12,0:12:20.89:21,0,152	0/0:9,0:9:7.85:0,8,83	0/0:10,0:9:12.77:0,13,88	0/0:20,0:20:16.54:0,17,286	0/0:17,0:17:48.03:0,48,602	1/1:15,1:16:41.69:357,42,0	0/0:14,0:14:26.76:0,27,195	0/1:14,0:13:14.49:14,0,117	0/0:10,0:10:26.90:0,27,256	0/0:13,0:13:20.14:0,20,125	0/0:21,0:20:23.76:0,24,176	0/0:17,0:17:29.86:0,30,266	0/0:10,0:10:6.30:0,6,49	0/0:27,1:27:28.77:0,29,443	0/0:17,0:17:35.98:0,36,460	0/0:14,0:14:30.64:0,31,414	0/0:19,0:19:43.11:0,43,321	0/1:2,0:2:17.99:21,0,18
chr10	54700253	.	CT	C	7520.43	PASS	AB=0.800;AC=25;AF=0.446;AN=56;BaseQRankSum=3.309;DP=463;FS=0.349;HRun=1;HaplotypeScore=51.9370;InbreedingCoeff=0.9263;MQ=80.21;MQ0=0;MQRankSum=1.134;QD=38.37;ReadPosRankSum=-0.181;VQSLOD=4.9425;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:93.28:0,93,1398	0/1:3,1:4:29.89:30,0,132	0/0:12,0:11:30.09:0,30,439	0/0:14,0:14:42.11:0,42,633	1/1:0,14:14:39.13:536,39,0	1/1:0,17:17:48.16:671,48,0	1/1:0,20:20:57.19:797,57,0	1/1:0,22:22:66.21:898,66,0	1/1:0,7:7:21.07:292,21,0	1/1:0,10:10:30.10:415,30,0	1/1:0,9:9:27.09:370,27,0	0/0:23,0:23:69.24:0,69,1101	0/0:9,0:9:27.09:0,27,432	1/1:0,20:20:51.17:712,51,0	1/1:1,23:24:26.80:880,27,0	0/0:24,0:24:72.25:0,72,1146	0/0:25,0:25:75.25:0,75,1165	0/0:15,0:15:45.14:0,45,695	0/0:18,0:18:54.18:0,54,853	0/0:19,0:19:57.19:0,57,909	0/0:13,0:13:36.10:0,36,537	0/0:13,0:13:39.13:0,39,623	0/0:8,0:8:24.08:0,24,381	0/0:24,0:24:69.24:0,69,1103	1/1:0,15:15:36.01:503,36,0	1/1:0,22:22:66.22:917,66,0	0/0:17,0:17:51.17:0,51,811	1/1:0,12:12:36.12:502,36,0
chr10	54700853	.	C	CT	592.66	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.567;DP=583;FS=30.550;HRun=6;HaplotypeScore=59.9882;InbreedingCoeff=0.9576;MQ=82.97;MQ0=0;MQRankSum=-2.389;QD=22.79;ReadPosRankSum=-0.718;VQSLOD=1.5552;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:93.11:0,93,917	1/1:2,4:6:12.04:147,12,0	0/0:18,0:18:18.33:0,18,273	0/0:18,0:18:11.37:0,11,284	0/0:23,0:23:56.79:0,57,555	0/0:20,0:20:33.43:0,33,398	0/0:18,0:18:54.12:0,54,550	0/0:36,0:36:99:0,102,995	0/0:23,0:23:63.11:0,63,628	0/0:18,0:18:47.93:0,48,482	0/0:20,0:20:54.11:0,54,545	0/0:16,0:16:45.10:0,45,456	0/0:20,0:20:57.01:0,57,548	0/0:30,0:30:81.15:0,81,825	0/0:24,0:24:66.13:0,66,661	1/1:2,18:20:45.14:562,45,0	0/0:28,0:28:75.09:0,75,735	0/0:17,0:17:45.08:0,45,450	0/0:13,0:13:29.62:0,30,271	0/0:14,0:14:35.44:0,35,339	0/0:33,0:33:78.12:0,78,769	0/0:15,0:15:42.07:0,42,416	0/0:18,0:18:51.11:0,51,519	0/0:31,0:31:93.21:0,93,947	0/0:22,0:22:56.73:0,57,539	0/0:21,0:21:44.42:0,44,484	0/0:19,0:19:51.10:0,51,513	0/0:6,0:6:18.04:0,18,183
chr10	54701020	.	CAGTT	C	11358.10	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=15.398;DP=626;FS=1.857;HRun=0;HaplotypeScore=106.5205;InbreedingCoeff=0.9974;MQ=88.79;MQ0=0;MQRankSum=-4.008;QD=39.71;ReadPosRankSum=5.034;VQSLOD=4.9307;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,37:42:93.32:1669,93,0	1/1:1,15:16:34.45:644,34,0	0/0:29,0:29:78.27:0,78,1810	0/0:20,0:20:44.74:0,45,1061	0/0:39,0:39:99:0,102,2572	0/0:19,0:18:45.11:0,45,1095	0/0:28,0:28:66.23:0,66,1674	0/0:31,0:31:84.27:0,84,2011	0/0:23,0:23:60.21:0,60,1559	0/0:26,0:26:69.24:0,69,1791	0/0:22,0:22:60.20:0,60,1500	1/1:1,17:18:48.16:863,48,0	1/1:1,5:6:15.01:236,15,0	0/0:16,0:16:45.15:0,45,1164	0/0:22,0:22:57.20:0,57,1447	1/1:1,9:10:24.08:431,24,0	1/1:3,17:20:36.12:647,36,0	1/1:1,15:16:42.14:755,42,0	1/1:3,18:21:54.19:970,54,0	1/1:0,19:19:45.15:776,45,0	1/1:4,25:29:56.55:1024,57,0	1/1:0,15:15:39.13:701,39,0	1/1:1,18:19:39.13:701,39,0	1/1:1,29:30:62.95:1132,63,0	0/0:29,0:29:75.26:0,75,1940	0/0:24,0:24:69.24:0,69,1757	1/1:2,23:25:45.15:809,45,0	0/0:12,0:12:33.11:0,33,850
chr10	54701547	.	ACT	A	1248.35	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.143;DP=628;FS=9.859;HRun=0;HaplotypeScore=76.4321;InbreedingCoeff=0.9972;MQ=76.04;MQ0=0;MQRankSum=-3.542;QD=37.83;ReadPosRankSum=0.727;VQSLOD=5.3829;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,102,1909	1/1:0,8:8:24.08:353,24,0	0/0:16,0:16:25.62:0,26,467	0/0:13,0:13:30.06:0,30,493	0/0:9,0:9:27.09:0,27,505	0/0:28,0:28:81.26:0,81,1485	0/0:27,0:27:81.28:0,81,1510	0/0:37,0:37:96.33:0,96,1796	0/0:23,0:23:69.24:0,69,1277	0/0:30,0:30:81.26:0,81,1456	0/0:16,0:16:48.16:0,48,878	0/0:26,0:26:72.25:0,72,1347	0/0:27,0:27:81.28:0,81,1492	0/0:23,0:23:66.23:0,66,1216	0/0:31,0:31:90.31:0,90,1679	1/1:1,24:25:69.23:1016,69,0	0/0:31,0:31:81.28:0,81,1507	0/0:17,0:17:48.16:0,48,899	0/0:19,0:19:54.18:0,54,977	0/0:19,0:19:57.20:0,57,1053	0/0:31,0:31:90.31:0,90,1686	0/0:17,0:17:48.16:0,48,896	0/0:13,0:13:39.12:0,39,685	0/0:26,0:26:78.27:0,78,1461	0/0:15,0:15:42.14:0,42,781	0/0:19,0:19:54.19:0,54,1008	0/0:34,0:34:99:0,99,1823	0/0:13,0:13:33.11:0,33,618
chr10	54701691	.	C	CT	4971.68	PASS	AB=0.958;AC=18;AF=0.321;AN=56;BaseQRankSum=-13.011;DP=600;FS=5.383;HRun=8;HaplotypeScore=62.8006;InbreedingCoeff=0.8740;MQ=71.10;MQ0=0;MQRankSum=0.772;QD=25.37;ReadPosRankSum=0.369;VQSLOD=5.6553;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,23:25:69.21:796,69,0	0/1:10,1:11:10.61:11,0,168	0/1:8,0:8:0.40:0,0,118	0/0:6,0:7:11.97:0,12,98	0/0:18,0:18:53.99:0,54,484	0/0:29,0:29:78.02:0,78,710	0/0:29,0:29:54.36:0,54,657	0/0:28,0:28:75.02:0,75,680	0/0:26,0:26:69.02:0,69,627	0/0:21,0:21:51.02:0,51,467	0/0:21,0:21:54.03:0,54,494	1/1:5,12:17:20.64:469,21,0	1/1:3,24:27:72.19:813,72,0	0/0:22,0:22:57.01:0,57,516	0/0:21,0:21:63.02:0,63,572	0/0:27,0:27:66.02:0,66,604	1/1:2,14:16:30.09:346,30,0	1/1:1,17:19:29.53:576,30,0	0/0:15,0:15:32.61:0,33,284	0/0:22,0:22:63.02:0,63,572	0/0:16,0:16:39.49:0,39,358	1/1:4,20:24:29.70:596,30,0	1/1:4,19:23:32.71:630,33,0	1/1:3,23:26:41.74:734,42,0	0/0:22,0:22:63.03:0,63,577	0/0:28,0:29:74.02:0,74,657	0/0:27,0:26:69.01:0,69,630	0/0:24,0:24:66.04:0,66,604
chr10	54704089	.	CTACAGTTTTATACAGTTTTATACAGTTTTA	C	9003.81	PASS	AC=18;AF=0.333;AN=54;BaseQRankSum=10.458;DP=584;FS=4.815;HRun=0;HaplotypeScore=399.4913;InbreedingCoeff=0.9468;MQ=70.32;MQ0=1;MQRankSum=-9.003;QD=64.78;ReadPosRankSum=4.739;VQSLOD=2.4803;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	1/1:5,0:5:9.03:528,9,0	0/0:19,0:19:48.16:0,48,2456	0/0:16,0:16:45.15:0,45,3409	0/0:27,0:27:78.27:0,78,7644	0/0:23,0:23:66.19:0,66,6374	0/0:21,0:21:57.20:0,57,5813	0/0:39,0:39:93.32:0,93,7450	0/0:11,0:11:33.11:0,33,3515	0/0:35,0:34:87.29:0,87,8909	0/0:19,0:19:54.18:0,54,6060	1/1:5,16:22:18.06:1412,18,0	1/1:8,12:20:21.07:1502,21,0	0/0:22,0:22:54.19:0,54,5583	0/0:15,0:15:42.10:0,42,3807	1/1:8,0:8:6.02:310,6,0	1/1:6,18:24:15.05:1023,15,0	1/1:3,5:8:9.03:707,9,0	0/0:26,0:26:72.23:0,72,6149	0/0:26,0:26:72.24:0,72,7304	0/0:28,0:27:69.23:0,69,8006	1/1:6,12:18:24.08:1658,24,0	1/1:9,10:19:15.05:1166,15,0	1/1:8,7:15:8.79:697,9,0	0/0:28,0:28:75.21:0,75,8011	0/0:27,0:27:72.25:0,72,8534	0/0:23,0:23:66.22:0,66,6902	0/0:27,0:27:81.28:0,81,9473
chr10	54704114	.	GTTTT	G	1379.62	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=10.761;DP=535;FS=8.123;HRun=4;HaplotypeScore=120.2683;InbreedingCoeff=0.9459;MQ=70.36;MQ0=0;MQRankSum=-9.977;QD=14.52;ReadPosRankSum=5.668;VQSLOD=-0.3782;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:0,7:7:9.03:174,9,0	1/1:3,0:3:9.03:169,9,0	0/0:22,0:22:63.22:0,63,1684	0/0:19,0:18:54.18:0,54,1486	0/0:26,0:26:78.27:0,78,2181	0/0:28,0:28:84.27:0,84,2314	0/0:25,0:25:72.20:0,72,1999	0/0:40,0:40:99:0,120,3275	0/0:14,0:14:42.14:0,42,1155	0/0:38,0:38:99:0,111,3074	0/0:18,0:18:54.18:0,54,1481	1/1:18,0:18:18.03:173,18,0	1/1:12,0:12:18.02:168,18,0	0/0:24,0:24:69.24:0,69,1938	0/0:16,0:16:45.15:0,45,1259	1/1:3,0:3:9.02:141,9,0	1/1:18,0:18:12.02:141,12,0	1/1:5,0:5:9.01:84,9,0	0/0:20,0:20:60.17:0,60,1602	0/0:21,0:21:63.21:0,63,1716	0/0:26,0:26:78.25:0,78,2152	1/1:12,0:12:21.04:256,21,0	1/1:10,0:10:15.02:170,15,0	1/1:7,0:7:9.02:113,9,0	0/0:23,0:23:66.21:0,66,1811	0/0:32,0:32:96.33:0,96,2738	0/0:19,0:19:51.18:0,51,1473	0/0:29,0:29:87.30:0,87,2405
chr10	54704207	.	C	CTG	628.46	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=3.276;DP=659;FS=0.867;HRun=0;HaplotypeScore=145.5470;InbreedingCoeff=0.9057;MQ=65.98;MQ0=2;MQRankSum=-1.777;QD=27.32;ReadPosRankSum=-0.800;VQSLOD=4.5188;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:42.13:0,42,530	1/1:0,10:10:15.05:249,15,0	0/0:28,0:22:32.66:0,33,459	0/0:34,0:32:46.76:0,47,739	0/0:17,0:17:21.07:0,21,264	0/0:27,0:27:36.07:0,36,413	0/0:32,0:32:71.16:0,71,861	0/0:29,0:29:50.47:0,50,580	0/0:25,0:25:36.05:0,36,427	0/0:21,0:22:54:0,54,657	0/0:5,0:5:9.03:0,9,114	0/0:30,0:30:45.10:0,45,550	0/0:21,0:21:14.99:0,15,157	0/0:22,0:22:36.12:0,36,437	0/0:23,0:23:24.06:0,24,302	1/1:1,12:13:30.10:498,30,0	0/0:32,0:33:66.21:0,66,832	0/0:21,0:22:35.93:0,36,416	0/0:30,0:30:69.21:0,69,849	0/0:14,0:14:30.08:0,30,365	0/0:68,0:67:99:0,132,1634	0/0:9,0:9:9.03:0,9,113	0/0:13,0:13:14.95:0,15,189	0/0:27,0:27:17.75:0,18,194	0/0:23,0:23:30.10:0,30,378	0/0:20,0:20:16.83:0,17,485	0/0:23,0:23:58.64:0,59,688	0/0:8,0:8:21.07:0,21,265
chr10	54704241	.	T	TGTGTGTGTGTGTGC	14019.87	PASS	AB=1.000;AC=32;AF=0.593;AN=54;BaseQRankSum=-6.301;DP=727;FS=5.918;HRun=0;HaplotypeScore=302.2956;InbreedingCoeff=0.4763;MQ=52.42;MQ0=8;MQRankSum=-0.712;QD=27.33;ReadPosRankSum=1.582;VQSLOD=2.8551;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:2.50:0,2,9	0/0:8,0:8:2.98:0,3,22	0/0:41,0:25:35.35:0,35,516	0/0:47,0:23:29.82:0,30,653	1/1:16,0:16:3.01:125,3,0	1/1:10,13:26:11.96:753,12,0	1/1:33,0:33:17.99:504,18,0	1/1:42,0:42:93.28:2549,93,0	1/1:8,13:22:18.51:1005,19,0	1/1:21,0:26:63.18:2020,63,0	0/0:6,4:12:0.39:0,0,1	0/0:22,0:22:8.61:0,9,67	0/0:21,0:21:11.62:0,12,127	1/1:19,12:34:30.10:1472,30,0	1/1:10,16:29:2.84:43,3,0	0/1:16,0:16:4.97:5,0,99	0/1:28,0:28:66.98:67,0,298	0/1:23,0:22:7.44:7,0,13	1/1:26,0:24:41.47:696,41,0	1/1:10,0:10:2.99:24,3,0	0/1:75,0:74:25.56:201,0,26	./.	0/1:13,0:13:0:0,0,0	0/1:30,0:30:0.22:0,0,0	0/0:14,12:30:6.72:0,7,69	1/1:15,12:32:72.18:2990,72,0	1/1:24,0:24:23.29:945,23,0	1/1:8,0:8:15.05:612,15,0
chr10	54704257	.	TGTATGTGC	T	3958.76	PASS	AB=0.953;AC=31;AF=0.574;AN=54;BaseQRankSum=9.424;DP=753;FS=7.026;HRun=0;HaplotypeScore=240.3860;InbreedingCoeff=-0.1612;MQ=46.82;MQ0=15;MQRankSum=-5.659;QD=6.53;ReadPosRankSum=5.789;VQSLOD=1.3919;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:29:19.79:162,20,0	0/1:9,0:9:15.93:33,0,16	0/0:46,0:21:49.21:0,49,861	0/0:41,0:15:39.02:0,39,1098	1/1:8,8:16:3.01:58,3,0	0/1:28,1:29:35.91:36,0,430	0/1:27,7:34:15.22:15,0,991	0/1:29,16:45:99:698,0,2640	0/1:25,0:25:34.49:34,0,275	0/1:28,3:31:99:515,0,1887	0/1:9,0:9:0:1,0,0	1/1:26,0:25:17.93:248,18,0	1/1:22,0:22:20.66:310,21,0	0/1:30,0:30:96.43:96,0,712	0/0:27,0:26:17.96:0,18,662	0/1:14,0:14:17.80:18,0,108	1/1:26,0:26:13.21:433,13,0	1/1:22,0:21:6.02:125,6,0	0/1:32,0:30:99:294,0,1235	0/1:11,0:11:14.94:15,0,189	0/1:78,0:77:99:112,0,1827	./.	1/1:14,0:14:5.49:43,5,0	1/1:40,0:40:3.01:50,3,0	0/0:26,0:26:11.70:0,12,265	0/1:35,0:35:99:258,0,2486	0/1:18,0:18:99:275,0,374	0/1:9,2:11:99:128,0,512
chr10	54704259	.	TATGTGCGTGTGTGTGTGC	T	5659.83	PASS	AB=0.947;AC=27;AF=0.500;AN=54;BaseQRankSum=8.666;DP=747;FS=2.608;HRun=0;HaplotypeScore=303.6044;InbreedingCoeff=0.1903;MQ=46.56;MQ0=15;MQRankSum=-5.009;QD=11.46;ReadPosRankSum=3.747;VQSLOD=3.2895;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,27:29:18.95:639,19,0	0/0:9,0:9:5.73:0,6,34	0/0:44,0:18:43.43:0,43,797	0/0:44,0:16:38.82:0,39,939	1/1:16,0:16:2.96:19,3,0	0/0:28,0:28:17.90:0,18,876	0/0:35,0:35:11.35:0,11,1926	0/1:44,0:44:99:285,0,3064	0/0:23,0:23:26.67:0,27,966	0/1:32,0:31:99:305,0,3241	1/1:10,0:10:0.17:1,0,0	1/1:1,25:25:18.06:778,18,0	1/1:0,21:21:20.71:934,21,0	0/1:31,0:31:35.76:36,0,1542	0/0:28,0:27:20.96:0,21,1286	0/1:14,0:14:57.64:58,0,95	1/1:19,6:25:52.35:1556,52,0	1/1:1,19:19:6.02:319,6,0	0/1:28,0:30:80.98:81,0,2016	0/0:7,0:10:8.99:0,9,381	0/1:74,0:78:17.75:18,0,3483	./.	1/1:1,13:14:5.84:235,6,0	1/1:0,40:40:2.84:146,3,0	0/0:24,0:24:16.48:0,16,540	0/1:33,0:33:66.02:66,0,4276	0/1:9,0:17:99:131,0,733	0/1:12,0:12:53.87:54,0,965
chr10	54704267	.	T	TGC	544.41	PASS	AB=0.990;AC=12;AF=0.222;AN=54;BaseQRankSum=6.927;DP=773;FS=0.575;HRun=0;HaplotypeScore=218.9715;InbreedingCoeff=-0.1522;MQ=43.35;MQ0=21;MQRankSum=-3.369;QD=2.08;ReadPosRankSum=0.451;VQSLOD=2.1557;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:13.65:0,14,104	0/1:7,0:7:14.33:14,0,19	0/0:45,0:10:19.65:0,20,282	0/0:52,0:14:29.92:0,30,409	1/1:15,1:16:2.88:55,3,0	0/1:22,0:23:1.06:1,0,212	0/0:36,2:38:41.95:0,42,636	0/1:48,0:48:99:263,0,1175	0/1:21,0:21:46.32:46,0,176	0/1:30,2:31:99:107,0,896	0/0:12,0:12:2.67:0,3,46	0/0:26,0:25:13.89:0,14,78	0/0:21,0:21:20.02:0,20,115	0/1:37,0:37:25.86:26,0,560	0/0:25,0:24:30.06:0,30,396	0/1:11,0:11:3.38:3,0,131	0/0:27,0:27:6.12:0,6,145	0/0:20,0:19:5.06:0,5,21	0/0:32,0:30:83.67:0,84,1014	0/0:12,0:12:8.82:0,9,117	0/0:85,0:85:73.05:0,73,1110	./.	0/0:14,0:14:5.92:0,6,39	0/0:40,0:40:2.80:0,3,13	0/0:25,0:26:19.83:0,20,278	0/1:34,0:34:99:127,0,1089	0/1:20,0:20:14.96:15,0,365	0/1:13,0:13:23.33:23,0,324
chr10	54704301	.	C	CGT	2675.80	PASS	AB=0.750;AC=11;AF=0.196;AN=56;BaseQRankSum=-6.737;DP=845;FS=0.000;HRun=0;HaplotypeScore=213.4968;InbreedingCoeff=0.7913;MQ=46.24;MQ0=23;MQRankSum=1.086;QD=15.56;ReadPosRankSum=1.515;VQSLOD=3.4250;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:36:48.97:0,49,532	0/1:4,2:6:27.90:89,0,28	0/0:56,0:13:2.03:0,2,213	0/0:53,0:15:17.74:0,18,190	0/0:16,0:16:12.03:0,12,137	0/0:24,0:24:39.36:0,39,477	0/0:48,0:48:97.88:0,98,1132	0/0:29,0:29:46.38:0,46,599	0/0:21,0:23:38.85:0,39,438	0/0:34,0:34:81.08:0,81,970	0/0:18,0:18:11.69:0,12,138	0/0:30,0:31:35.71:0,36,374	0/0:21,0:21:26.84:0,27,312	0/0:33,0:34:59.82:0,60,712	0/0:25,0:25:53.99:0,54,627	1/1:7,4:11:9.03:147,9,0	0/0:40,0:41:77.76:0,78,854	0/0:17,0:16:14.07:0,14,146	1/1:18,16:33:14.89:656,15,0	1/1:1,12:14:8.92:147,9,0	1/1:29,56:85:86.47:1415,86,0	0/0:21,0:21:12.04:0,12,146	0/0:15,0:17:21.06:0,21,255	0/0:44,0:44:35.99:0,36,406	0/0:27,0:29:28.46:0,28,313	0/0:36,0:36:86.96:0,87,1034	1/1:7,13:20:24.08:391,24,0	0/0:16,0:16:36.11:0,36,428
chr10	54704671	.	GA	G	1953.94	PASS	AB=0.832;AC=27;AF=0.482;AN=56;BaseQRankSum=8.432;DP=654;FS=15.265;HRun=2;HaplotypeScore=163.1533;InbreedingCoeff=0.3074;MQ=40.14;MQ0=43;MQRankSum=-7.157;QD=6.43;ReadPosRankSum=3.191;VQSLOD=-0.5349;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,6:7:2.56:37,3,0	1/1:2,3:5:12:120,12,0	0/0:85,0:9:4.55:0,5,206	0/0:90,0:12:23.32:0,23,212	0/0:24,2:26:33.44:0,33,370	0/1:20,3:23:8.64:9,0,346	0/0:16,0:14:30.55:0,31,299	0/1:25,8:28:99:216,0,586	0/1:19,4:22:29.33:29,0,288	0/1:33,10:42:99:356,0,791	0/0:26,1:26:15.53:0,16,502	1/1:2,7:10:3.95:40,4,0	1/1:4,13:17:11.45:149,11,0	0/1:20,4:21:22.07:22,0,310	0/0:29,5:32:23.87:0,24,504	1/1:7,7:14:24.32:223,24,0	0/0:5,2:6:5.68:0,6,24	1/1:0,3:3:9.03:112,9,0	0/1:10,5:15:99:138,0,101	1/1:3,9:11:8.96:99,9,0	1/1:6,2:6:2.75:18,3,0	1/1:9,13:22:3.84:40,4,0	0/0:3,8:11:1.99:0,2,4	0/0:3,3:6:1.62:0,2,6	0/0:21,3:21:42.07:0,42,467	0/1:27,5:30:99:117,0,762	1/1:0,13:13:35.93:413,36,0	0/0:24,0:23:54.13:0,54,686
chr10	54704672	.	A	AG	2265.54	PASS	AB=0.907;AC=29;AF=0.518;AN=56;BaseQRankSum=8.811;DP=645;FS=14.050;HRun=1;HaplotypeScore=161.5902;InbreedingCoeff=0.2213;MQ=40.46;MQ0=44;MQRankSum=-6.713;QD=5.76;ReadPosRankSum=3.151;VQSLOD=-0.7513;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,0:7:3.01:38,3,0	1/1:4,1:5:12.50:133,12,0	0/1:86,0:9:5.55:6,0,196	0/0:90,0:12:22.73:0,23,216	0/0:21,2:23:32.77:0,33,367	0/1:19,6:25:21.90:22,0,343	0/0:13,1:12:30.36:0,30,300	0/1:32,1:28:99:231,0,597	0/1:17,5:21:49.68:50,0,288	0/1:35,7:41:99:487,0,758	0/0:20,6:25:4.32:0,4,485	1/1:10,0:10:2.44:37,2,0	1/1:17,0:17:11.20:150,11,0	0/1:24,2:23:38.60:39,0,302	0/0:27,7:32:27.27:0,27,511	1/1:8,2:15:26.48:234,26,0	0/1:6,1:6:2.47:2,0,4	1/1:3,0:3:9.03:113,9,0	0/1:12,0:12:71.80:138,0,72	1/1:9,1:9:12.07:106,12,0	1/1:8,1:6:2.75:18,3,0	1/1:21,0:21:3.07:39,3,0	0/0:11,0:11:1.02:0,1,3	0/0:6,1:7:2.04:0,2,6	0/0:21,2:20:41.97:0,42,426	0/1:27,3:28:99:173,0,721	1/1:13,0:13:36.05:428,36,0	0/0:24,0:23:54.10:0,54,650
chr10	54704678	.	GTGA	G	2676.23	PASS	AB=0.792;AC=29;AF=0.518;AN=56;BaseQRankSum=7.704;DP=635;FS=11.514;HRun=0;HaplotypeScore=163.9990;InbreedingCoeff=0.4620;MQ=42.67;MQ0=44;MQRankSum=-7.416;QD=7.71;ReadPosRankSum=0.301;VQSLOD=2.6666;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:1,6:7:0.26:45,0,0	1/1:1,4:5:14.22:159,14,0	0/0:87,0:10:19.18:0,19,248	0/1:95,1:17:21.23:21,0,271	0/0:18,3:21:22.43:0,22,428	0/0:20,3:23:14.36:0,14,627	0/0:16,0:14:39.43:0,39,547	0/1:28,2:26:42.13:42,0,680	0/1:15,4:18:40.25:40,0,290	0/1:32,8:39:99:358,0,834	0/0:24,2:25:12.39:0,12,617	1/1:1,8:9:4.38:56,4,0	1/1:4,13:17:11.68:202,12,0	0/0:22,5:24:14.18:0,14,603	0/0:28,5:31:18.88:0,19,710	1/1:7,7:14:23.79:299,24,0	1/1:3,4:6:10.81:85,11,0	1/1:0,3:3:9.03:150,9,0	1/1:4,5:9:24.08:393,24,0	1/1:3,6:8:11.63:213,12,0	1/1:8,2:7:6.02:82,6,0	1/1:4,13:17:2.96:33,3,0	0/1:3,8:11:0.30:0,0,1	0/0:3,4:7:0.59:0,1,1	0/0:19,3:19:43.39:0,43,632	0/1:24,5:27:99:138,0,822	1/1:1,13:14:33.54:550,34,0	0/0:24,0:23:54.18:0,54,793
chr10	54704680	.	GA	G	1466.79	PASS	AB=0.991;AC=28;AF=0.500;AN=56;BaseQRankSum=8.263;DP=648;FS=9.615;HRun=2;HaplotypeScore=164.7925;InbreedingCoeff=0.5602;MQ=43.84;MQ0=44;MQRankSum=-5.792;QD=4.72;ReadPosRankSum=0.634;VQSLOD=-0.2673;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,0:7:2.53:30,3,0	1/1:5,0:5:6.20:79,6,0	0/0:90,0:11:18.72:0,19,171	0/1:96,0:17:0.97:1,0,251	0/0:23,0:23:39.96:0,40,512	0/0:23,0:23:23.90:0,24,657	0/0:17,0:15:39.55:0,40,541	0/0:31,0:27:40.89:0,41,912	0/1:19,0:18:22.82:23,0,334	0/1:40,1:40:99:162,0,960	0/0:27,1:27:25.47:0,25,680	1/1:9,0:9:4.16:36,4,0	1/1:17,0:17:10.73:132,11,0	0/0:27,0:24:24.07:0,24,630	0/0:32,1:31:32.55:0,33,741	1/1:14,0:14:18.94:153,19,0	1/1:7,0:6:4.94:42,5,0	1/1:3,0:3:9.02:90,9,0	1/1:10,2:12:32.43:281,32,0	1/1:7,2:8:11.59:121,12,0	1/1:7,4:8:8.76:70,9,0	1/1:16,0:17:0.86:20,1,0	0/0:11,0:11:0.93:0,1,2	0/0:7,0:7:0.47:0,0,1	0/0:22,0:19:43.50:0,43,632	0/1:29,0:27:65.12:65,0,899	1/1:14,0:14:33.05:352,33,0	0/0:25,0:24:57.18:0,57,832
chr10	54704681	.	A	AG	1863.91	PASS	AB=0.960;AC=30;AF=0.536;AN=56;BaseQRankSum=8.458;DP=650;FS=9.356;HRun=1;HaplotypeScore=184.4939;InbreedingCoeff=0.5441;MQ=45.20;MQ0=44;MQRankSum=-5.695;QD=5.72;ReadPosRankSum=-0.547;VQSLOD=-0.5426;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,0:6:3.01:31,3,0	1/1:7,0:7:9.28:91,9,0	0/0:90,0:12:13.24:0,13,144	0/1:94,0:18:10.51:11,0,209	0/0:23,0:23:37.47:0,37,462	0/0:20,0:20:9.21:0,9,580	0/0:17,1:16:39.56:0,40,516	0/0:33,0:29:38.01:0,38,881	0/1:17,1:17:41.23:41,0,316	0/1:40,3:42:99:243,0,896	0/0:24,3:26:14.51:0,15,626	1/1:8,0:8:5.45:47,5,0	1/1:17,0:17:12.61:137,13,0	0/0:26,1:24:11.82:0,12,561	0/0:28,3:29:33.52:0,34,685	1/1:13,0:15:24.56:198,25,0	1/1:7,0:6:5.30:46,5,0	1/1:3,0:3:9.02:90,9,0	1/1:10,2:12:33.08:396,33,0	1/1:9,0:8:11.62:122,12,0	1/1:10,0:7:9.02:120,9,0	1/1:18,0:18:3.12:24,3,0	1/1:11,0:11:0.39:1,0,0	0/0:7,0:7:0.80:0,1,1	0/0:21,1:19:44.74:0,45,590	0/1:29,1:28:99:106,0,836	1/1:14,0:14:33.05:353,33,0	0/0:25,0:24:57.18:0,57,779
chr10	54704687	.	GAAGA	G	1016.11	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=6.646;DP=646;FS=0.000;HRun=0;HaplotypeScore=188.0729;InbreedingCoeff=0.7785;MQ=48.56;MQ0=39;MQRankSum=-4.839;QD=13.03;ReadPosRankSum=0.455;VQSLOD=3.2258;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,6:7:12:154,12,0	0/0:7,0:7:2:0,2,48	0/0:85,0:14:25.82:0,26,361	0/0:95,0:22:22.60:0,23,521	0/0:21,0:23:36.78:0,37,960	0/0:18,0:21:51.56:0,52,1305	0/0:18,0:16:45.08:0,45,1171	0/0:35,0:31:89.48:0,89,1956	0/0:16,0:19:31.02:0,31,824	0/0:37,0:42:99:0,102,2117	0/0:26,0:26:51.61:0,52,1394	1/1:2,6:8:11.86:141,12,0	1/1:3,11:14:30.06:415,30,0	0/0:24,0:25:51.18:0,51,1420	0/0:28,0:30:57.22:0,57,1399	0/1:13,0:13:32.13:33,0,32	1/1:2,1:3:5.68:36,6,0	1/1:0,3:3:9.03:161,9,0	0/0:12,0:12:32.23:0,32,409	0/0:11,0:10:18.87:0,19,315	0/0:14,0:11:24.08:0,24,389	1/1:2,13:15:20.95:212,21,0	1/1:1,8:9:2.43:40,2,0	1/1:1,3:5:2.84:8,3,0	0/0:22,0:20:45.61:0,46,1195	0/0:26,0:28:77.94:0,78,1949	0/0:15,0:15:38.21:0,38,341	0/0:26,0:25:52.17:0,52,1592
chr10	54704688	.	AAG	A	724.84	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=8.451;DP=622;FS=7.434;HRun=0;HaplotypeScore=170.2998;InbreedingCoeff=0.8816;MQ=49.49;MQ0=38;MQRankSum=-6.685;QD=8.63;ReadPosRankSum=-0.419;VQSLOD=2.9216;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:7,0:7:8.89:70,9,0	1/1:4,3:7:8.62:71,9,0	0/0:83,0:15:21.43:0,21,243	0/0:95,0:22:19.04:0,19,287	0/0:22,0:22:29.60:0,30,525	0/0:20,0:20:48.16:0,48,795	0/0:18,0:16:42.14:0,42,702	0/0:31,0:28:72.23:0,72,1144	0/0:21,0:20:33.11:0,33,535	0/0:39,0:38:81.02:0,81,1191	0/0:23,0:22:50.98:0,51,826	1/1:8,0:8:11.60:83,12,0	1/1:13,0:14:26.93:246,27,0	0/0:28,0:25:54.18:0,54,887	0/0:30,0:28:50.59:0,51,831	1/1:6,7:13:26.58:212,27,0	1/1:2,0:2:4.82:33,5,0	1/1:3,0:3:9.02:96,9,0	0/0:13,0:13:33.11:0,33,480	0/0:9,0:9:18.05:0,18,259	0/0:14,0:11:24.08:0,24,345	1/1:14,0:15:14.54:92,15,0	1/1:9,0:9:2.41:16,2,0	0/1:5,0:5:0.14:0,0,0	0/0:21,0:18:45.14:0,45,718	0/0:30,0:28:69.19:0,69,1111	0/0:15,0:15:33.05:0,33,351	0/0:26,0:25:57.19:0,57,950
chr10	54704690	.	GA	G	576.80	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=6.317;DP=623;FS=0.000;HRun=2;HaplotypeScore=170.2496;InbreedingCoeff=0.8951;MQ=50.15;MQ0=36;MQRankSum=-3.938;QD=8.61;ReadPosRankSum=-1.265;VQSLOD=0.5925;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,1:7:11.97:121,12,0	0/0:7,0:7:14.98:0,15,76	0/0:77,0:15:27.97:0,28,380	0/0:91,0:22:18.29:0,18,406	0/0:22,0:22:36.41:0,36,566	0/0:21,0:21:51.17:0,51,810	0/0:19,0:17:48.10:0,48,713	0/0:30,0:27:78.26:0,78,1226	0/0:21,0:20:32.63:0,33,523	0/0:39,0:38:95.86:0,96,1407	0/0:24,0:23:53.93:0,54,839	1/1:8,0:8:9.42:75,9,0	1/1:13,1:14:26.36:208,26,0	0/0:28,0:25:54.66:0,55,859	0/0:30,0:28:51.37:0,51,815	0/0:11,0:11:25.95:0,26,135	1/1:4,1:4:11.78:76,12,0	1/1:4,0:4:8.29:69,8,0	0/0:14,0:14:37.01:0,37,549	0/0:9,0:9:18.27:0,18,253	0/0:14,0:11:24.08:0,24,355	1/1:14,1:15:20.42:168,20,0	1/1:8,1:9:2.42:39,2,0	1/1:4,1:5:1.55:4,2,0	0/0:22,0:19:45.15:0,45,719	0/0:32,0:30:82.34:0,82,1211	0/0:15,0:15:39.09:0,39,479	0/0:29,0:28:69.19:0,69,1020
chr10	54704749	.	TCC	T	1744.58	PASS	AB=0.733;AC=17;AF=0.304;AN=56;BaseQRankSum=-2.363;DP=650;FS=8.069;HRun=2;HaplotypeScore=181.1413;InbreedingCoeff=0.5161;MQ=46.96;MQ0=26;MQRankSum=-2.040;QD=8.64;ReadPosRankSum=0.648;VQSLOD=-0.0109;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:18,6:21:11.78:215,12,0	0/1:2,3:4:48.34:64,0,48	0/0:27,0:11:18.60:0,19,368	0/0:39,0:12:15.52:0,16,346	0/0:24,0:24:41.64:0,42,666	0/0:21,0:20:45.43:0,45,728	0/0:36,0:33:65.66:0,66,1086	0/0:29,0:27:74.46:0,74,925	0/0:29,0:27:63.16:0,63,997	0/0:36,0:34:88.38:0,88,1343	0/0:23,0:22:51.17:0,51,843	0/1:11,6:17:23.62:219,0,24	1/1:2,15:17:26.55:293,27,0	0/0:28,0:28:63.62:0,64,1049	0/0:25,0:25:61.94:0,62,927	1/1:1,7:8:0.75:65,1,0	1/1:11,8:19:29.30:360,29,0	0/1:5,8:10:20.13:56,0,20	0/0:19,0:17:24.73:0,25,613	0/0:16,0:16:35.29:0,35,652	0/1:57,1:52:99:136,0,1257	0/1:8,6:14:26.78:105,0,27	1/1:7,4:11:14.54:189,15,0	1/1:12,4:15:14.66:228,15,0	0/0:20,0:19:48.15:0,48,760	0/0:40,0:37:99:0,101,1581	0/0:14,0:14:19.93:0,20,259	0/0:22,0:22:57.19:0,57,941
chr10	54704835	.	CTTG	C	1058.53	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.895;DP=681;FS=3.492;HRun=0;HaplotypeScore=139.0755;InbreedingCoeff=0.9966;MQ=78.12;MQ0=1;MQRankSum=-5.989;QD=30.24;ReadPosRankSum=-0.201;VQSLOD=4.0634;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:72.18:0,72,1487	1/1:1,8:9:24.08:357,24,0	0/0:25,0:25:63.03:0,63,1227	0/0:31,0:30:65.45:0,65,1573	0/0:21,0:21:54.16:0,54,1000	0/0:26,0:26:69.24:0,69,1465	0/0:41,0:41:99:0,111,2258	0/0:26,0:26:72.25:0,72,1524	0/0:33,0:33:90.31:0,90,1930	0/0:29,0:29:72.25:0,72,1474	0/0:13,0:13:39.13:0,39,837	0/0:22,0:22:63.22:0,63,1344	0/0:19,0:19:57.20:0,57,1209	0/0:23,0:23:60.62:0,61,1165	0/0:36,0:36:93.30:0,93,1909	1/1:3,23:26:60.04:823,60,0	0/0:33,0:33:96.33:0,96,2044	0/0:22,0:22:57.17:0,57,1171	0/0:15,0:15:42.13:0,42,856	0/0:16,0:16:45.15:0,45,956	0/0:45,0:45:99:0,114,2354	0/0:21,0:21:63.20:0,63,1276	0/0:11,0:11:33.10:0,33,666	0/0:42,0:42:99:0,119,2498	0/0:21,0:21:54.19:0,54,1146	0/0:22,0:22:51.17:0,51,1021	0/0:14,0:14:39.13:0,39,799	0/0:7,0:7:21.07:0,21,451
chr10	54705941	.	T	TGACTATAGGGAA	35563.84	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-4.785;DP=848;FS=4.070;HRun=0;HaplotypeScore=278.3687;InbreedingCoeff=0.9999;MQ=82.17;MQ0=0;MQRankSum=-21.994;QD=117.37;ReadPosRankSum=0.051;VQSLOD=4.6834;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:17,26:46:99:4708,114,0	1/1:3,14:18:45.15:2420,45,0	0/0:31,0:31:59.38:0,59,2780	0/0:27,0:27:71.05:0,71,1996	0/0:20,0:20:54.19:0,54,1759	0/0:23,0:23:69.22:0,69,2488	0/0:31,0:31:93.28:0,93,3257	0/0:37,0:37:99:0,102,3576	0/0:34,0:34:99:0,102,3696	0/0:32,0:32:87.30:0,87,3166	0/0:18,0:18:54.19:0,54,1947	1/1:18,24:47:99:6362,120,0	1/1:9,18:29:81.06:3956,81,0	0/0:41,0:41:99:0,123,4450	0/0:50,0:50:99:0,150,5237	1/1:10,30:45:99:6200,118,0	1/1:7,9:22:36.08:1946,36,0	1/1:7,6:15:36.12:2208,36,0	0/0:17,0:17:48.14:0,48,1610	0/0:37,0:37:99:0,99,3475	0/0:49,0:49:99:0,132,4607	1/1:16,18:38:96.07:4155,96,0	1/1:8,8:17:37.83:1818,38,0	1/1:12,11:26:39.57:1791,40,0	0/0:24,0:24:72.21:0,72,2431	0/0:23,0:23:69.24:0,69,2523	0/0:34,0:33:99:0,102,3400	0/0:17,0:17:39.12:0,39,1312
chr10	54707426	.	AATATATATATATATATATATATATAT	A	1476.52	PASS	AB=0.727;AC=5;AF=0.208;AN=24;BaseQRankSum=0.355;DP=173;FS=9.498;HRun=0;HaplotypeScore=108.8738;InbreedingCoeff=0.3819;MQ=89.64;MQ0=3;MQRankSum=-2.654;QD=46.14;ReadPosRankSum=2.722;VQSLOD=1.4953;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:4,0:8:12.04:0,12,753	0/0:10,0:10:3.01:0,3,31	0/0:19,0:11:12.50:0,12,193	./.	./.	./.	0/0:10,0:10:6.01:0,6,200	./.	0/0:4,0:4:3.01:0,3,151	./.	0/0:4,0:4:3.01:0,3,113	./.	./.	./.	0/0:6,0:12:18.06:0,18,1058	0/0:16,0:16:24.08:0,24,1798	0/0:6,0:6:9.03:0,9,911	1/1:5,1:6:3.01:203,3,0	0/1:5,1:8:36.35:376,0,36	./.	./.	./.	./.	./.	./.	1/1:9,8:18:15.05:995,15,0	./.
chr10	54707514	.	C	CT	580.05	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-4.403;DP=282;FS=1.625;HRun=1;HaplotypeScore=32.0022;InbreedingCoeff=0.8177;MQ=101.58;MQ0=0;MQRankSum=-2.175;QD=30.53;ReadPosRankSum=-1.454;VQSLOD=2.9057;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:45.15:0,45,584	1/1:0,2:2:6.02:90,6,0	0/0:25,0:25:63.15:0,63,798	0/0:8,0:8:24.08:0,24,302	0/0:5,0:5:15.05:0,15,195	0/0:17,0:17:51.17:0,51,662	0/0:6,0:6:18.06:0,18,234	0/0:28,0:28:84.26:0,84,1063	0/0:8,0:8:24.08:0,24,312	0/0:8,0:8:21.07:0,21,273	0/0:7,0:7:21.07:0,21,273	0/0:7,0:7:21.07:0,21,273	0/0:6,0:6:18.06:0,18,234	0/0:6,0:6:18.06:0,18,234	0/0:9,0:9:27.07:0,27,336	1/1:2,15:17:6.19:591,6,0	0/0:12,0:12:36.12:0,36,467	0/0:8,0:8:21.07:0,21,272	0/0:11,0:11:30.04:0,30,343	0/0:8,0:8:21.07:0,21,268	0/0:7,0:7:18.06:0,18,234	0/0:5,0:5:12.04:0,12,156	0/0:6,0:6:18.06:0,18,234	0/0:7,0:7:21.07:0,21,273	0/0:7,0:7:21.07:0,21,273	0/0:10,0:10:30.10:0,30,388	0/0:21,0:21:57.17:0,57,726	0/0:5,0:5:15.05:0,15,195
chr10	54707911	.	CGGG	C	6323.19	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=15.664;DP=506;FS=5.244;HRun=5;HaplotypeScore=90.3441;InbreedingCoeff=0.9788;MQ=56.99;MQ0=2;MQRankSum=-5.155;QD=41.33;ReadPosRankSum=2.524;VQSLOD=3.8594;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,30:29:72.25:1201,72,0	0/0:2,0:2:6.02:0,6,102	0/0:8,0:5:15.05:0,15,302	0/0:13,0:11:33.11:0,33,678	0/0:24,0:24:69.24:0,69,1587	0/0:22,0:22:63.22:0,63,1425	0/0:16,0:16:45.15:0,45,1038	0/0:20,0:20:54.19:0,54,1221	0/0:20,0:20:54.19:0,54,1245	0/0:11,0:11:33.11:0,33,760	0/0:14,0:14:42.14:0,42,958	1/1:3,10:13:30.10:501,30,0	1/1:0,18:17:48.16:802,48,0	0/0:14,0:14:42.14:0,42,968	0/0:24,0:24:69.22:0,69,1525	0/0:14,0:14:42.14:0,42,720	1/1:2,24:26:20.32:913,20,0	1/1:0,12:12:33.11:552,33,0	0/0:22,0:21:63.17:0,63,1379	0/0:23,0:23:69.23:0,69,1550	0/0:22,0:22:66.23:0,66,1496	1/1:1,17:17:48.16:800,48,0	1/1:0,10:10:27.09:450,27,0	1/1:0,26:26:66.23:1104,66,0	0/0:22,0:22:59.90:0,60,1360	0/0:20,0:20:60.21:0,60,1334	0/0:25,0:25:75.26:0,75,1656	0/0:17,0:17:48.16:0,48,1101
chr10	54708000	.	C	CA	1375.61	PASS	AB=0.844;AC=16;AF=0.286;AN=56;BaseQRankSum=-0.931;DP=511;FS=2.275;HRun=14;HaplotypeScore=78.2835;InbreedingCoeff=0.1580;MQ=56.41;MQ0=6;MQRankSum=-1.557;QD=5.57;ReadPosRankSum=-1.100;VQSLOD=2.4357;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:15,10:25:17.03:317,17,0	0/0:2,0:2:0.45:0,0,1	0/0:6,0:4:5.22:0,5,47	0/1:10,0:6:10.19:15,0,10	0/0:24,0:24:33.61:0,34,204	0/0:11,0:13:10.81:0,11,63	0/0:15,2:20:10.17:0,10,177	0/1:22,4:27:38.48:38,0,219	0/0:11,0:12:25.67:0,26,160	0/0:18,0:21:40.88:0,41,237	0/1:16,1:18:0.82:1,0,113	1/1:14,6:19:9.50:161,10,0	0/1:12,4:15:24.78:173,0,25	0/0:16,0:16:9.18:0,9,120	0/0:24,0:24:33.40:0,33,203	0/1:8,0:8:5.81:6,0,6	0/1:21,7:27:49.48:208,0,49	1/1:10,6:15:8.41:169,8,0	0/0:10,0:18:19.13:0,19,67	0/0:9,0:27:27.24:0,27,90	0/0:3,0:20:20.85:0,21,72	0/1:15,7:22:20.25:153,0,20	0/1:7,18:25:7.75:181,0,8	0/1:8,5:14:17.10:110,0,17	0/0:17,1:20:11.82:0,12,194	0/0:19,0:21:35.67:0,36,220	0/1:6,0:15:3.93:4,0,24	0/0:12,0:12:9.20:0,9,120
chr10	54708475	.	GT	G	1699.40	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.409;DP=693;FS=5.184;HRun=3;HaplotypeScore=66.6692;InbreedingCoeff=0.9997;MQ=82.63;MQ0=0;MQRankSum=-4.219;QD=33.32;ReadPosRankSum=3.262;VQSLOD=4.3330;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,105,1487	1/1:0,23:23:69.22:855,69,0	0/0:23,0:23:63.16:0,63,835	0/0:23,0:23:52.37:0,52,693	0/0:33,0:33:96.31:0,96,1365	0/0:23,0:23:66.20:0,66,931	0/0:21,0:21:63.20:0,63,890	0/0:28,0:28:81.24:0,81,1102	0/0:25,0:25:72.24:0,72,1036	0/0:32,0:32:87.29:0,87,1238	0/0:28,0:28:84.27:0,84,1183	0/0:22,0:22:66.21:0,66,934	0/0:21,0:21:63.21:0,63,907	0/0:16,0:16:45.15:0,45,647	0/0:22,0:22:60.19:0,60,845	1/1:0,28:28:78.25:966,78,0	0/0:25,0:25:75.22:0,75,1058	0/0:20,0:20:57.19:0,57,816	0/0:22,0:22:66.21:0,66,933	0/0:30,0:30:90.30:0,90,1296	0/0:24,0:24:72.23:0,72,1018	0/0:21,0:21:63.20:0,63,889	0/0:26,0:26:78.26:0,78,1123	0/0:27,0:27:75.25:0,75,1080	0/0:23,0:23:66.22:0,66,950	0/0:31,0:31:93.30:0,93,1307	0/0:29,0:28:84.25:0,84,1155	0/0:10,0:10:30.10:0,30,432
chr10	54709386	.	GT	G	3083.32	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=11.741;DP=640;FS=1.689;HRun=9;HaplotypeScore=72.2674;InbreedingCoeff=0.9978;MQ=71.30;MQ0=0;MQRankSum=-4.907;QD=19.89;ReadPosRankSum=3.369;VQSLOD=4.3545;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,14:16:39.02:356,39,0	0/0:13,0:13:36:0,36,373	0/0:11,0:11:21.05:0,21,226	0/0:11,0:11:17.85:0,18,186	0/0:30,0:32:65.84:0,66,708	0/0:20,0:20:57.16:0,57,649	0/0:28,0:28:81.17:0,81,898	0/0:30,0:30:75.21:0,75,857	0/0:26,0:27:68.99:0,69,759	0/0:27,0:27:66.19:0,66,757	0/0:34,0:34:72.17:0,72,813	1/1:3,19:22:48.01:439,48,0	1/1:2,14:16:39.02:356,39,0	0/0:27,0:27:66.17:0,66,742	0/0:26,0:26:60.15:0,60,674	0/0:22,0:21:60.18:0,60,692	1/1:6,27:33:66.03:604,66,0	1/1:2,14:16:39.02:357,39,0	0/0:23,0:24:56.98:0,57,620	0/0:29,0:30:87.03:0,87,951	0/0:23,0:23:63.19:0,63,727	1/1:0,21:21:57.03:521,57,0	1/1:2,12:14:30.01:274,30,0	1/1:1,16:17:42.02:384,42,0	0/0:25,0:25:69.20:0,69,788	0/0:36,0:36:90.24:0,90,1014	0/0:25,0:24:72.18:0,72,802	0/0:14,0:14:42.09:0,42,467
chr10	54709635	.	C	CCTGCTACTTCTCAGCCT	124394.24	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-7.596;DP=755;FS=0.602;HRun=0;HaplotypeScore=304.3932;InbreedingCoeff=0.9868;MQ=65.89;MQ0=0;MQRankSum=-10.566;QD=175.20;ReadPosRankSum=4.797;VQSLOD=4.3125;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,14:38:84.29:6039,84,0	1/1:9,8:18:45.15:3288,45,0	0/0:24,0:24:69.15:0,69,2576	0/0:21,0:21:25.18:0,25,1861	1/1:22,10:34:80.80:5418,81,0	1/1:16,14:31:87.30:6756,87,0	1/1:33,6:46:99:6933,102,0	1/1:40,0:44:99:8032,129,0	1/1:11,10:23:54.19:3882,54,0	1/1:21,9:34:96.30:6331,96,0	1/1:26,10:39:96.33:6048,96,0	1/1:13,8:23:54.18:3758,54,0	1/1:20,2:22:63.21:3860,63,0	1/1:17,14:35:90.31:6862,90,0	1/1:13,11:28:66.23:4955,66,0	1/1:15,14:37:81.28:6306,81,0	1/1:14,3:17:45.15:3380,45,0	1/1:8,4:15:36.12:3027,36,0	1/1:20,2:25:66.23:3927,66,0	1/1:12,3:20:39.13:2665,39,0	1/1:7,3:14:18.06:1359,18,0	1/1:15,12:31:72.25:4985,72,0	1/1:9,10:21:42.14:3262,42,0	1/1:6,1:8:15.05:778,15,0	1/1:13,13:27:78.27:6174,78,0	1/1:22,7:30:90.31:6557,90,0	1/1:19,16:38:99:7606,102,0	1/1:6,4:11:33.11:2206,33,0
chr10	54709982	.	T	TA	1578.20	PASS	AB=0.813;AC=17;AF=0.304;AN=56;BaseQRankSum=5.101;DP=465;FS=0.000;HRun=13;HaplotypeScore=69.0113;InbreedingCoeff=0.6120;MQ=69.53;MQ0=2;MQRankSum=1.563;QD=8.87;ReadPosRankSum=1.740;VQSLOD=2.8288;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:13,17:31:8.23:309,8,0	0/0:4,0:4:2.01:0,2,6	0/1:32,0:16:15.61:16,0,19	0/0:14,0:9:1.45:0,1,34	0/0:15,0:17:34.73:0,35,230	0/0:17,0:17:44.56:0,45,304	0/0:13,0:13:29.68:0,30,205	0/0:21,1:24:29.91:0,30,194	0/0:15,0:16:9.89:0,10,204	0/0:19,0:19:38.58:0,39,266	0/0:27,0:27:29.01:0,29,318	0/1:2,5:7:23.09:93,0,23	1/1:3,13:16:18.49:314,18,0	0/0:9,0:9:14.81:0,15,103	0/0:13,0:13:26.68:0,27,183	0/0:4,0:12:19.25:0,19,66	1/1:6,23:30:34.23:402,34,0	1/1:4,10:17:26.71:224,27,0	0/0:16,0:16:4.80:0,5,174	0/0:12,0:12:23.73:0,24,163	0/1:10,2:12:9.96:10,0,85	1/1:2,7:9:12.01:111,12,0	1/1:3,13:17:1.11:148,1,0	1/1:1,6:7:15.01:136,15,0	0/0:22,0:22:41.53:0,42,285	0/0:15,0:15:29.65:0,30,204	0/0:20,0:20:31.73:0,32,210	0/0:15,0:15:32.64:0,33,226
chr10	54710144	.	AGGTGTGATAACCACTGTGG	A	829.08	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=4.425;DP=453;FS=16.895;HRun=0;HaplotypeScore=222.7952;InbreedingCoeff=0.9217;MQ=83.18;MQ0=0;MQRankSum=-3.150;QD=92.12;ReadPosRankSum=0.622;VQSLOD=1.9889;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:81.28:0,81,7117	1/1:2,2:4:6.02:322,6,0	0/0:16,0:16:35.30:0,35,2411	0/0:17,0:17:45.09:0,45,2657	0/0:17,0:17:45.15:0,45,3839	0/0:18,0:18:48.15:0,48,3584	0/0:20,0:20:54.19:0,54,4360	0/0:20,0:20:45.15:0,45,3272	0/0:13,0:13:39.13:0,39,3562	0/0:17,0:17:48.16:0,48,3895	0/0:17,0:17:51.18:0,51,4421	0/0:11,0:11:33.11:0,33,2803	0/0:10,0:10:27.09:0,27,2421	0/0:7,0:7:21.07:0,21,1895	0/0:16,0:16:48.16:0,48,4065	1/1:2,3:5:12.04:613,12,0	0/0:18,0:18:51.18:0,51,4547	0/0:21,0:21:63.22:0,63,5350	0/0:12,0:12:36.11:0,36,2495	0/0:21,0:21:63.22:0,63,5264	0/0:22,0:22:63.22:0,63,5721	0/0:23,0:23:66.23:0,66,5436	0/0:22,0:22:63.22:0,63,5258	0/0:20,0:20:60.21:0,60,5177	0/0:11,0:11:33.11:0,33,3021	0/0:14,0:14:39.13:0,39,3334	0/0:23,0:23:63.22:0,63,5538	0/0:8,0:8:24.08:0,24,1987
chr10	54710267	.	CAG	C	3417.52	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=10.505;DP=611;FS=2.033;HRun=0;HaplotypeScore=75.8074;InbreedingCoeff=0.9912;MQ=90.79;MQ0=1;MQRankSum=-0.783;QD=37.15;ReadPosRankSum=0.961;VQSLOD=5.7608;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:42:99:0,126,2346	0/0:10,0:10:30.10:0,30,561	0/0:24,0:24:66.20:0,66,1167	0/0:37,0:35:87.15:0,87,1469	0/0:26,0:26:75.26:0,75,1404	0/0:15,0:15:36.08:0,36,638	0/0:19,0:19:57.17:0,57,1005	0/0:24,0:24:66.23:0,66,1226	0/0:15,0:15:39.13:0,39,722	0/0:38,0:38:99:0,111,2036	0/0:24,0:24:69.21:0,69,1229	0/0:23,0:22:66.21:0,66,1205	0/0:16,0:16:48.16:0,48,898	0/0:21,0:21:63.20:0,63,1147	0/0:19,0:19:57.18:0,57,1031	0/0:24,0:24:63.17:0,63,1137	0/0:20,0:20:60.21:0,60,1124	0/0:17,0:16:48.16:0,48,899	1/1:2,21:23:63.19:904,63,0	1/1:1,12:13:36.12:530,36,0	1/1:1,25:26:63.21:928,63,0	0/0:14,0:14:42.14:0,42,771	0/0:16,0:16:48.16:0,48,872	0/0:26,0:26:78.27:0,78,1460	0/0:20,0:20:60.21:0,60,1124	0/0:23,0:23:66.23:0,66,1236	1/1:1,29:29:71.82:1056,72,0	0/0:5,0:5:12.04:0,12,225
chr10	54711030	.	CATAAA	C	1247.58	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.190;DP=514;FS=7.259;HRun=0;HaplotypeScore=92.9275;InbreedingCoeff=0.9578;MQ=69.88;MQ0=0;MQRankSum=0.481;QD=41.59;ReadPosRankSum=2.235;VQSLOD=3.4096;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:93.32:0,93,2692	1/1:2,7:9:17.93:373,18,0	0/0:8,0:6:12.04:0,12,216	0/0:9,0:9:15.47:0,15,198	0/0:22,0:22:63.22:0,63,1875	0/0:21,0:21:57.19:0,57,1636	0/0:14,0:14:33.11:0,33,956	0/0:39,0:39:99:0,102,2961	0/0:13,0:13:30.10:0,30,867	0/0:26,0:26:72.25:0,72,1928	0/0:17,0:17:51.18:0,51,1541	0/0:12,0:12:27.09:0,27,830	0/0:18,0:18:54.18:0,54,1477	0/0:17,0:17:33.11:0,33,956	0/0:15,0:15:33.10:0,33,880	1/1:4,17:21:48.16:995,48,0	0/0:32,0:32:87.30:0,87,2517	0/0:26,0:26:78.27:0,78,2342	0/0:26,0:26:75.26:0,75,2263	0/0:19,0:19:51.18:0,51,1557	0/0:10,0:10:18.04:0,18,381	0/0:10,0:10:21.07:0,21,592	0/0:9,0:9:15.05:0,15,361	0/0:14,0:14:30.10:0,30,815	0/0:17,0:17:48.16:0,48,1399	0/0:28,0:28:78.27:0,78,2319	0/0:16,0:16:45.15:0,45,1381	0/0:12,0:12:36.12:0,36,1107
chr10	54711812	.	GGGA	G	18401.88	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=13.973;DP=555;FS=11.159;HRun=0;HaplotypeScore=137.0705;InbreedingCoeff=0.9976;MQ=82.77;MQ0=0;MQRankSum=-10.628;QD=43.50;ReadPosRankSum=4.647;VQSLOD=6.3970;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,29:31:81.28:1380,81,0	1/1:0,6:6:18.06:307,18,0	0/0:21,0:21:60.14:0,60,1234	0/0:19,0:19:54.19:0,54,1211	1/1:0,25:25:69.24:1176,69,0	1/1:0,25:25:60.20:1008,60,0	1/1:0,17:17:42.14:704,42,0	1/1:3,23:26:69.21:1119,69,0	1/1:1,20:21:57.19:971,57,0	1/1:0,23:23:66.11:1124,66,0	1/1:2,21:23:51.17:844,51,0	1/1:0,19:19:51.17:869,51,0	1/1:1,19:20:48.16:817,48,0	1/1:0,10:10:27.09:460,27,0	1/1:1,20:21:57.19:959,57,0	1/1:0,17:17:45.15:767,45,0	1/1:0,17:17:39.09:634,39,0	1/1:1,15:16:45.15:767,45,0	0/0:20,0:20:60.21:0,60,1385	0/0:27,0:27:81.26:0,81,1823	0/0:24,0:24:69.22:0,69,1547	1/1:0,9:9:24.08:409,24,0	1/1:1,22:23:63.22:1073,63,0	1/1:4,20:24:37.07:614,37,0	1/1:1,11:12:30.10:508,30,0	1/1:0,25:25:75.26:1278,75,0	0/0:21,0:21:60.21:0,60,1339	1/1:0,13:13:36.12:614,36,0
chr10	54712354	.	G	GTTCTCCAT	39393.88	PASS	AB=1.000;AC=41;AF=0.732;AN=56;BaseQRankSum=-6.916;DP=584;FS=28.882;HRun=0;HaplotypeScore=135.2704;InbreedingCoeff=0.9029;MQ=82.21;MQ0=5;MQRankSum=-17.039;QD=95.38;ReadPosRankSum=0.351;VQSLOD=3.4540;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,18:33:63.22:2724,63,0	0/1:9,0:9:86.79:87,0,570	0/0:18,0:18:42.14:0,42,1154	0/0:29,0:29:72.97:0,73,1677	1/1:8,16:28:51.97:1908,52,0	1/1:1,8:10:21.07:922,21,0	1/1:5,12:18:51.18:2231,51,0	1/1:16,17:33:81.28:3397,81,0	1/1:4,11:15:42.14:1787,42,0	1/1:10,11:22:57.18:2299,57,0	1/1:6,12:19:45.15:1838,45,0	1/1:6,14:23:60.21:2577,60,0	1/1:7,12:23:54.15:2147,54,0	1/1:6,11:18:51.18:2217,51,0	1/1:8,10:21:48.16:1838,48,0	0/0:23,0:23:66.23:0,66,1844	1/1:10,6:18:27.56:1062,28,0	1/1:4,8:12:33.11:1459,33,0	0/0:21,0:21:51.17:0,51,1315	0/0:26,0:26:69.22:0,69,1851	0/0:35,0:35:96.30:0,96,2575	1/1:2,3:5:12.04:488,12,0	1/1:4,15:21:50.74:2119,51,0	1/1:7,13:20:51.18:2202,51,0	1/1:14,11:26:66.23:2473,66,0	1/1:4,14:21:60.14:2294,60,0	0/0:19,0:18:54.19:0,54,1511	1/1:1,10:13:30.10:1325,30,0
chr10	54712527	.	G	GT	7407.07	PASS	AB=0.786;AC=40;AF=0.714;AN=56;BaseQRankSum=12.135;DP=357;FS=0.470;HRun=8;HaplotypeScore=99.8720;InbreedingCoeff=0.8298;MQ=62.35;MQ0=0;MQRankSum=-12.802;QD=28.71;ReadPosRankSum=2.531;VQSLOD=4.2407;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,21:25:63.15:711,63,0	0/0:12,0:12:24:0,24,220	0/0:7,0:6:12:0,12,110	0/1:10,0:10:5.35:5,0,91	1/1:0,16:17:38.94:423,39,0	1/1:1,13:14:39.11:447,39,0	1/1:2,6:8:21.05:231,21,0	1/1:6,17:24:54.16:621,54,0	1/1:2,7:9:24.06:268,24,0	1/1:2,13:15:45.13:518,45,0	1/1:2,5:7:15.04:170,15,0	1/1:0,9:9:27.08:311,27,0	1/1:1,6:7:21.06:242,21,0	1/1:1,9:10:30.09:345,30,0	1/1:0,11:11:33.10:381,33,0	0/0:9,0:9:24.01:0,24,220	1/1:3,4:7:12.03:136,12,0	1/1:1,9:10:27.07:305,27,0	0/0:20,0:20:39.01:0,39,357	0/0:17,0:17:45.01:0,45,411	0/0:10,0:10:23.99:0,24,214	0/1:1,3:4:15.40:92,0,15	1/1:2,9:11:30.08:337,30,0	1/1:2,5:7:15.03:162,15,0	1/1:4,18:22:57.12:634,57,0	1/1:1,20:21:63.19:724,63,0	0/0:24,0:24:69.01:0,69,622	1/1:3,7:10:30.09:343,30,0
chr10	54712545	.	A	AT	10845.20	PASS	AB=1.000;AC=41;AF=0.732;AN=56;BaseQRankSum=9.689;DP=428;FS=6.147;HRun=5;HaplotypeScore=109.2133;InbreedingCoeff=0.9102;MQ=61.23;MQ0=1;MQRankSum=-10.089;QD=32.67;ReadPosRankSum=0.851;VQSLOD=4.1931;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,26:28:63.12:795,63,0	0/0:7,0:7:18.05:0,18,193	0/1:11,0:9:0.54:1,0,82	0/0:18,0:15:2.54:0,3,114	1/1:0,22:22:63.12:796,63,0	1/1:0,20:20:60.20:780,60,0	1/1:0,9:9:27.09:346,27,0	1/1:5,24:29:72.15:862,72,0	1/1:0,15:15:42.14:547,42,0	1/1:0,23:23:66.15:823,66,0	1/1:1,5:6:17.99:212,18,0	1/1:1,11:12:30.10:389,30,0	1/1:1,11:12:27.08:345,27,0	1/1:0,12:12:30.10:390,30,0	1/1:3,11:14:42.11:516,42,0	0/0:10,0:10:24.04:0,24,248	1/1:0,11:11:21.07:268,21,0	1/1:3,13:16:42.05:524,42,0	0/0:12,0:12:33.08:0,33,349	0/0:14,0:14:42.10:0,42,444	0/0:8,0:8:18.05:0,18,193	1/1:0,5:5:15.05:195,15,0	1/1:0,17:17:45.06:562,45,0	1/1:1,7:8:21.05:258,21,0	1/1:1,25:26:66.13:835,66,0	1/1:0,26:26:78.25:1012,78,0	0/0:26,0:26:65.80:0,66,660	1/1:0,10:10:30.10:391,30,0
chr10	54712940	.	T	TGTGC	5966.31	PASS	AB=0.959;AC=29;AF=0.518;AN=56;BaseQRankSum=10.384;DP=707;FS=3.357;HRun=0;HaplotypeScore=218.8793;InbreedingCoeff=0.4463;MQ=56.38;MQ0=4;MQRankSum=-5.853;QD=13.91;ReadPosRankSum=-0.665;VQSLOD=4.2402;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:2.18:0,2,69	0/0:16,0:16:48.16:0,48,864	0/0:39,0:19:37.52:0,38,540	0/0:38,0:15:8.82:0,9,264	1/1:17,7:25:17.51:261,18,0	1/1:18,2:20:17.98:259,18,0	1/1:39,8:47:32.28:429,32,0	1/1:20,0:20:36.93:463,37,0	1/1:17,10:27:51.96:781,52,0	1/1:26,8:34:95.88:1311,96,0	0/0:4,9:13:2.99:0,3,23	1/1:23,0:23:7.97:132,8,0	0/1:21,0:21:75.12:75,0,100	1/1:22,8:30:44.84:636,45,0	1/1:13,3:16:18.01:229,18,0	0/0:21,0:21:60.21:0,60,1097	0/1:34,0:34:56.12:146,0,56	0/1:17,0:17:24.21:24,0,65	0/0:24,0:24:56.89:0,57,880	0/0:24,0:24:66.23:0,66,1214	0/0:48,0:48:99:0,138,2411	0/1:18,0:18:12.71:13,0,108	0/1:19,0:19:28.45:36,0,28	0/1:25,0:25:28.98:29,0,62	0/1:15,10:25:3.74:252,0,4	1/1:14,6:20:53.86:761,54,0	0/0:20,0:19:54.12:0,54,902	1/1:7,1:8:11.93:130,12,0
chr10	54712945	.	G	GCGCGCA	7109.43	PASS	AB=0.939;AC=36;AF=0.643;AN=56;BaseQRankSum=12.130;DP=764;FS=10.710;HRun=0;HaplotypeScore=288.2026;InbreedingCoeff=0.7648;MQ=51.66;MQ0=7;MQRankSum=-9.689;QD=13.78;ReadPosRankSum=-3.306;VQSLOD=2.2153;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:41,2:42:9.69:64,0,10	0/0:16,0:16:48.12:0,48,1007	0/0:42,0:19:44.67:0,45,685	0/0:36,0:13:17.08:0,17,290	1/1:25,0:25:13.24:170,13,0	1/1:19,0:19:9.01:169,9,0	1/1:47,0:46:24.95:283,25,0	1/1:21,0:21:32.76:266,33,0	1/1:28,0:28:36.92:740,37,0	1/1:38,0:39:48.12:1060,48,0	0/0:13,0:13:3.46:0,3,24	1/1:25,4:29:39.03:446,39,0	1/1:25,3:28:24.63:519,25,0	1/1:31,0:32:42.98:600,43,0	1/1:16,0:16:9.96:208,10,0	0/0:21,0:21:60.18:0,60,1351	1/1:34,6:40:41.70:738,42,0	1/1:17,1:18:20.29:281,20,0	0/0:22,0:22:60.15:0,60,1187	0/0:23,0:23:69.19:0,69,1585	0/0:52,0:52:99:0,153,3247	1/1:20,1:21:15.54:110,16,0	1/1:25,2:27:20.60:242,21,0	1/1:30,0:30:11.08:120,11,0	0/1:22,0:24:36.33:306,0,36	1/1:23,0:23:38.54:712,39,0	0/0:19,0:19:54.15:0,54,1191	1/1:6,0:6:0.98:78,1,0
chr10	54712967	.	GCA	G	745.20	PASS	AB=0.908;AC=13;AF=0.232;AN=56;BaseQRankSum=4.275;DP=767;FS=7.219;HRun=0;HaplotypeScore=238.8220;InbreedingCoeff=-0.0559;MQ=50.19;MQ0=12;MQRankSum=-3.474;QD=2.81;ReadPosRankSum=0.142;VQSLOD=1.6472;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:51:3:0,3,35	0/0:10,0:10:30.10:0,30,495	0/0:47,1:19:1.69:0,2,439	0/0:42,0:18:22.04:0,22,368	0/0:25,1:26:3.09:0,3,12	1/1:17,2:19:4.36:34,4,0	1/1:42,2:43:1.72:36,2,0	0/1:14,14:28:16.80:305,0,17	0/1:24,2:26:22.78:66,0,23	0/1:37,0:37:73.77:96,0,74	0/1:11,0:10:6.14:19,0,6	0/0:29,0:29:15.26:0,15,97	0/0:23,0:23:3.45:0,3,94	0/1:28,0:28:14.87:15,0,42	0/0:16,1:17:4.40:0,4,18	0/0:20,1:21:22.71:0,23,901	0/0:43,0:43:26.33:0,26,211	0/1:19,0:19:0.88:1,0,41	0/0:16,0:14:21.04:0,21,289	0/1:19,2:21:23.88:24,0,667	0/0:55,0:55:99:0,107,2248	0/0:19,0:19:5.42:0,5,37	0/0:22,0:22:5.48:0,5,48	0/0:35,0:35:2.73:0,3,22	0/0:25,0:25:20.60:0,21,94	0/1:15,7:22:96.04:158,0,96	0/0:17,0:17:48.16:0,48,784	0/1:9,1:10:19.86:131,0,20
chr10	54712969	.	A	ACG	2867.80	PASS	AB=0.774;AC=27;AF=0.482;AN=56;BaseQRankSum=11.661;DP=778;FS=4.175;HRun=0;HaplotypeScore=234.7775;InbreedingCoeff=0.1364;MQ=50.94;MQ0=12;MQRankSum=-7.901;QD=5.79;ReadPosRankSum=1.594;VQSLOD=3.0816;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:51:5.93:0,6,42	0/0:10,0:10:30.10:0,30,458	0/0:47,0:19:9.80:0,10,534	0/0:43,0:18:45.06:0,45,529	0/1:7,18:28:36.75:37,0,37	1/1:9,10:19:8.81:83,9,0	1/1:20,26:45:12.04:114,12,0	0/1:24,4:28:99:327,0,104	1/1:8,18:26:15.64:371,16,0	0/1:21,15:38:99:566,0,221	0/1:11,1:11:14.19:35,0,14	1/1:29,0:29:14.91:93,15,0	1/1:24,0:24:15.15:135,15,0	0/1:8,20:28:28.65:232,0,29	0/1:7,11:19:35.23:66,0,35	0/0:21,0:21:60.10:0,60,888	0/1:44,0:44:21.56:115,0,22	1/1:19,0:19:25.17:129,25,0	0/0:15,0:13:32.63:0,33,369	0/0:22,0:22:62.93:0,63,799	0/0:55,0:55:99:0,162,2276	0/1:19,0:19:14.30:23,0,14	1/1:24,0:24:4.76:28,5,0	1/1:33,0:33:2.19:12,2,0	0/1:10,11:27:17.12:100,0,17	0/1:14,8:22:56.92:479,0,57	0/0:17,0:17:51.16:0,51,755	0/1:9,1:10:17.32:111,0,17
chr10	54712971	.	A	ACG	1892.20	PASS	AB=0.943;AC=23;AF=0.411;AN=56;BaseQRankSum=11.443;DP=795;FS=1.948;HRun=0;HaplotypeScore=239.7707;InbreedingCoeff=0.2656;MQ=51.69;MQ0=12;MQRankSum=-11.014;QD=4.11;ReadPosRankSum=3.413;VQSLOD=2.7730;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:12,37:51:0.47:0,0,2	0/0:10,0:10:30.10:0,30,458	0/0:45,0:18:41:0,41,531	0/0:45,0:19:48:0,48,566	0/1:28,0:28:9.20:9,0,34	0/1:20,0:20:10.28:29,0,10	0/1:46,0:45:38.31:38,0,48	0/0:28,0:28:13.81:0,14,340	0/1:27,0:27:41.10:73,0,41	0/1:38,0:38:64.35:64,0,315	0/0:12,0:11:4.78:0,5,52	1/1:2,23:32:15.16:181,15,0	1/1:2,18:26:30.07:426,30,0	0/1:27,1:28:16.52:63,0,17	0/1:20,0:20:18.28:18,0,33	0/0:22,0:22:63.15:0,63,915	1/1:8,30:45:19.17:536,19,0	1/1:2,15:19:19.52:352,20,0	0/0:15,0:13:32.79:0,33,373	0/0:23,0:23:66.02:0,66,826	0/0:56,0:56:99:0,162,2288	0/1:2,16:21:5.28:5,0,16	1/1:3,21:26:4.94:101,5,0	1/1:2,31:34:2.40:57,2,0	1/1:27,0:27:20.68:87,21,0	0/1:23,0:23:36.79:37,0,204	0/0:17,0:17:51.16:0,51,757	0/0:10,0:10:6.96:0,7,84
chr10	54713474	.	GT	G	14391.65	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=12.516;DP=641;FS=0.000;HRun=4;HaplotypeScore=65.7982;InbreedingCoeff=0.9767;MQ=75.59;MQ0=0;MQRankSum=-1.529;QD=31.29;ReadPosRankSum=2.597;VQSLOD=5.2761;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,49:50:99:1641,138,0	0/0:7,0:7:21.04:0,21,274	0/0:18,0:17:39.02:0,39,467	0/0:10,0:11:4.68:0,5,166	1/1:2,30:32:80.99:927,81,0	1/1:2,20:22:54.15:635,54,0	1/1:1,29:30:69.21:827,69,0	1/1:0,21:21:63.19:755,63,0	1/1:0,19:19:48.15:575,48,0	1/1:0,19:19:57.12:655,57,0	1/1:2,18:20:54.07:611,54,0	1/1:0,21:21:57.17:683,57,0	1/1:0,23:23:63.19:755,63,0	1/1:2,17:19:48.15:575,48,0	1/1:0,14:14:39.12:467,39,0	0/0:12,0:12:36.11:0,36,488	1/1:2,30:32:78.24:935,78,0	1/1:1,23:24:60.18:719,60,0	0/0:28,0:28:72.22:0,72,975	0/0:18,0:18:51.16:0,51,698	0/0:38,0:38:99:0,111,1495	1/1:1,14:15:39.12:467,39,0	1/1:0,15:15:42.13:502,42,0	1/1:0,29:29:69.14:809,69,0	1/1:1,18:19:54.17:646,54,0	1/1:1,25:26:72.19:847,72,0	0/0:49,0:49:99:0,129,1770	1/1:0,10:10:30.09:359,30,0
chr10	54713876	.	GCA	G	333.99	PASS	AB=0.940;AC=20;AF=0.435;AN=46;BaseQRankSum=2.983;DP=525;FS=8.269;HRun=0;HaplotypeScore=105.9803;InbreedingCoeff=0.0863;MQ=67.09;MQ0=13;MQRankSum=-1.455;QD=1.19;ReadPosRankSum=-0.089;VQSLOD=1.1781;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:31:21.10:33,0,21	0/1:7,1:8:26.31:26,0,38	./.	./.	0/1:14,0:14:14.65:15,0,78	0/0:13,0:13:6.48:0,6,145	0/0:19,0:18:7.13:0,7,72	0/0:26,0:25:5.28:0,5,19	1/1:8,0:8:5.97:45,6,0	0/1:12,0:11:9.29:9,0,36	0/0:12,0:12:11.99:0,12,133	1/1:20,0:19:5.83:35,6,0	1/1:17,0:17:5.19:27,5,0	0/0:17,0:17:0.28:0,0,213	0/0:17,0:17:6:0,6,67	0/1:14,5:20:99:126,0,246	1/1:29,0:29:6.11:27,6,0	./.	0/1:17,0:18:14.52:28,0,15	./.	0/1:46,1:47:25.19:55,0,25	0/0:8,0:7:2.98:0,3,22	./.	0/1:36,0:36:0:0,0,0	0/0:20,0:20:7.50:0,8,209	0/0:15,0:15:14.51:0,15,195	1/1:8,0:8:5.64:26,6,0	1/1:8,0:7:2.99:25,3,0
chr10	54713910	.	ACACACACACACACG	A	1208.67	PASS	AB=0.998;AC=17;AF=0.304;AN=56;BaseQRankSum=-2.549;DP=574;FS=30.430;HRun=0;HaplotypeScore=198.6257;InbreedingCoeff=-0.3115;MQ=52.43;MQ0=23;MQRankSum=0.966;QD=3.49;ReadPosRankSum=-5.364;VQSLOD=-0.4309;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:31,0:31:72.29:72,0,213	0/0:9,0:9:21.05:0,21,926	0/0:20,0:5:11.49:0,11,73	0/0:26,0:5:9:0,9,81	0/0:7,0:7:21.07:0,21,832	0/1:17,0:16:37.83:38,0,1020	0/0:16,0:16:14.09:0,14,1040	0/1:26,0:24:99:173,0,580	0/0:11,0:10:5.68:0,6,258	0/1:17,0:15:16.05:16,0,941	0/1:13,0:13:88.74:89,0,633	0/1:23,0:23:99:160,0,122	0/1:23,0:23:49.80:79,0,50	0/1:23,0:23:17.91:18,0,1498	0/1:10,0:10:19.91:20,0,650	0/0:19,0:19:52.02:0,52,2245	0/1:37,0:37:37.42:117,0,37	0/1:22,0:21:99:132,0,197	0/0:17,0:17:40.14:0,40,872	0/0:15,0:15:26.99:0,27,543	0/0:66,0:61:99:0,107,2619	1/1:3,11:14:6.02:140,6,0	0/1:10,0:10:9.15:9,0,80	0/1:38,1:39:84.35:203,0,84	0/1:20,0:19:35.74:36,0,1347	0/1:21,0:21:66.85:67,0,1317	0/0:7,0:6:11.88:0,12,236	0/0:15,0:13:9.03:0,9,316
chr10	54713912	.	ACACACACACACG	A	1919.44	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=-2.718;DP=565;FS=35.693;HRun=0;HaplotypeScore=177.6161;InbreedingCoeff=-0.0315;MQ=51.63;MQ0=23;MQRankSum=1.051;QD=5.36;ReadPosRankSum=-4.593;VQSLOD=-0.5733;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:27:42.18:149,0,42	0/0:10,0:10:24.05:0,24,812	0/0:19,0:5:11.49:0,11,73	0/0:27,0:5:11.68:0,12,92	0/0:7,0:7:21.07:0,21,726	0/1:17,0:16:59.31:59,0,902	0/1:14,0:14:13.87:14,0,819	0/1:27,0:25:99:230,0,403	0/0:11,0:10:5.65:0,6,205	0/1:17,0:15:17.19:17,0,763	0/1:13,0:13:91.75:92,0,477	0/1:23,0:23:2.53:185,0,3	1/1:21,1:22:4.54:160,5,0	0/1:25,0:25:92.15:92,0,1183	0/1:9,0:9:43.82:44,0,509	0/0:19,0:19:48.98:0,49,1879	1/1:35,3:38:9.91:260,10,0	0/1:22,0:21:53.19:234,0,53	0/0:14,0:14:32.10:0,32,577	0/0:15,0:15:29.94:0,30,439	0/0:64,0:59:99:0,106,2048	1/1:14,0:14:5.99:76,6,0	0/1:10,0:10:12.05:12,0,18	1/1:37,1:38:25.17:324,25,0	0/1:20,0:19:41.80:42,0,1106	0/1:22,0:22:99:104,0,1055	0/0:6,0:5:11.88:0,12,183	0/0:15,0:13:9.03:0,9,240
chr10	54713922	.	ACG	A	4042.10	PASS	AB=0.986;AC=35;AF=0.625;AN=56;BaseQRankSum=0.495;DP=557;FS=6.093;HRun=0;HaplotypeScore=97.8823;InbreedingCoeff=0.2625;MQ=55.06;MQ0=17;MQRankSum=0.823;QD=10.39;ReadPosRankSum=-1.378;VQSLOD=2.4736;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:18:1.48:166,1,0	0/0:8,0:8:3.89:0,4,154	0/0:23,0:9:13.46:0,13,115	0/0:32,0:10:19.68:0,20,169	0/1:8,1:9:11.76:169,0,12	0/1:18,0:17:14.32:216,0,14	1/1:17,0:17:22.75:285,23,0	1/1:6,21:26:44.96:474,45,0	1/1:1,12:12:6.02:91,6,0	1/1:14,1:14:35.57:299,36,0	0/1:11,0:11:17.77:123,0,18	1/1:22,0:22:26.09:246,26,0	1/1:20,0:20:8.43:62,8,0	0/1:24,0:24:38.19:237,0,38	1/1:11,0:11:12.12:201,12,0	0/1:17,0:17:12.76:13,0,380	1/1:29,0:29:8.90:61,9,0	1/1:17,0:16:27.43:301,27,0	0/0:20,0:20:2.70:0,3,287	0/0:15,0:15:35.80:0,36,275	0/0:57,0:54:6.34:0,6,551	0/0:13,0:13:2.90:0,3,16	1/1:0,10:10:2.53:17,3,0	1/1:38,0:38:47.63:407,48,0	0/1:20,0:19:25.35:238,0,25	1/1:24,0:24:3.21:382,3,0	0/1:9,0:8:7.12:7,0,81	1/1:2,18:19:3.01:45,3,0
chr10	54714777	.	C	CTT	4876.53	PASS	AB=0.689;AC=39;AF=0.696;AN=56;BaseQRankSum=1.020;DP=609;FS=6.043;HRun=14;HaplotypeScore=101.4463;InbreedingCoeff=0.4998;MQ=82.92;MQ0=0;MQRankSum=-3.153;QD=10.56;ReadPosRankSum=0.008;VQSLOD=3.7206;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,2:24:12.38:155,12,0	1/1:1,2:4:8.34:67,8,0	0/0:45,0:31:22.81:0,23,177	0/1:24,0:19:14.15:14,0,88	1/1:14,2:28:39.77:377,40,0	1/1:8,4:19:21.04:229,21,0	1/1:7,2:15:21.04:222,21,0	1/1:24,1:32:29.55:306,30,0	1/1:9,1:19:28.25:269,28,0	1/1:11,4:25:38.96:366,39,0	1/1:5,3:27:61.26:608,61,0	0/1:7,0:11:3.17:3,0,20	0/1:8,0:28:2.22:62,0,2	1/1:15,0:15:12.03:126,12,0	1/1:2,2:18:30.05:305,30,0	1/1:9,1:18:19.84:186,20,0	1/1:6,1:28:21.64:157,22,0	0/1:6,1:15:4.85:69,0,5	0/0:22,0:26:20.24:0,20,271	0/0:22,0:27:49.41:0,49,371	0/0:21,0:21:38.29:0,38,312	0/1:4,0:15:4.65:50,0,5	0/1:6,0:15:7.20:7,0,39	0/1:8,2:15:71.51:86,0,72	1/1:5,5:22:42.09:457,42,0	1/1:14,4:34:37.90:585,38,0	0/0:22,0:27:35.37:0,35,325	1/1:3,0:11:18.02:170,18,0
chr10	54716160	.	CA	C	1513.59	PASS	AB=0.925;AC=18;AF=0.321;AN=56;BaseQRankSum=11.082;DP=566;FS=0.332;HRun=1;HaplotypeScore=86.0400;InbreedingCoeff=0.5453;MQ=75.42;MQ0=1;MQRankSum=-0.476;QD=5.80;ReadPosRankSum=3.582;VQSLOD=0.6296;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:32,0:32:50.18:171,50,0	0/0:4,0:4:8.96:0,9,69	0/0:20,0:18:44.96:0,45,521	0/0:24,0:23:45.23:0,45,706	0/0:19,0:19:57.14:0,57,700	0/0:16,0:16:42.06:0,42,510	0/0:36,0:36:99:0,105,1273	0/0:18,0:18:54.07:0,54,594	0/0:22,0:22:52.43:0,52,805	0/0:22,0:22:66.01:0,66,786	0/0:10,0:10:30.01:0,30,331	1/1:29,0:29:45.47:176,45,0	1/1:22,3:24:41.77:193,42,0	0/0:23,0:23:69.13:0,69,841	0/0:27,0:27:77.66:0,78,946	0/0:17,0:17:30.83:0,31,235	0/1:31,0:31:61.37:112,0,61	0/1:26,0:26:22.62:80,0,23	1/1:8,2:10:20.41:169,20,0	1/1:10,0:10:18.48:132,18,0	1/1:23,1:24:54.13:441,54,0	0/1:19,0:19:12.87:57,0,13	0/1:15,0:15:30.42:45,0,30	0/1:23,0:23:30.36:84,0,30	0/0:17,0:16:51:0,51,564	0/0:21,0:21:60.13:0,60,719	0/1:3,14:17:1.08:50,0,1	0/0:9,0:9:24.06:0,24,300
chr10	54716161	.	AC	A	4725.07	PASS	AB=0.972;AC=19;AF=0.339;AN=56;BaseQRankSum=6.801;DP=566;FS=1.152;HRun=8;HaplotypeScore=75.9628;InbreedingCoeff=0.7824;MQ=74.67;MQ0=1;MQRankSum=-0.505;QD=18.75;ReadPosRankSum=4.305;VQSLOD=4.8685;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,30:32:81.13:782,81,0	0/0:4,0:4:8.39:0,8,39	0/0:19,0:17:29.29:0,29,392	0/0:24,0:23:46.89:0,47,589	0/0:19,0:19:54.17:0,54,650	0/0:16,0:16:45.10:0,45,507	0/0:36,0:36:96.28:0,96,1147	0/0:18,0:18:30.09:0,30,360	0/0:23,0:23:52.55:0,53,731	0/0:21,0:21:48.15:0,48,579	0/0:11,0:11:21.06:0,21,251	1/1:0,28:29:83.17:788,83,0	1/1:5,21:25:57.09:550,57,0	0/0:23,0:23:60.18:0,60,724	0/0:28,0:28:75.21:0,75,885	0/0:17,0:17:30.72:0,31,144	1/1:5,25:30:75.12:724,75,0	1/1:3,22:25:66.10:637,66,0	0/1:10,1:11:34.65:35,0,35	0/0:10,0:10:3.48:0,3,39	0/1:25,0:25:14.40:14,0,31	1/1:2,17:19:42.06:406,42,0	1/1:3,12:15:27.50:261,28,0	1/1:3,20:23:37.65:528,38,0	0/0:17,0:16:39.12:0,39,471	0/0:19,0:19:51.16:0,51,613	0/1:17,0:17:0.11:0,0,0	0/0:9,0:9:21.05:0,21,242
chr10	54716163	.	C	CCCCACA	1390.65	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-4.283;DP=568;FS=0.000;HRun=0;HaplotypeScore=150.5108;InbreedingCoeff=0.8776;MQ=75.36;MQ0=1;MQRankSum=-5.299;QD=55.63;ReadPosRankSum=-0.137;VQSLOD=3.6327;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:81.27:0,81,1260	1/1:0,4:4:9.03:308,9,0	0/0:20,0:18:34.34:0,34,715	0/0:24,0:23:19.54:0,20,945	0/0:18,0:18:54.15:0,54,1176	0/0:16,0:16:45.09:0,45,820	0/0:36,0:36:99:0,102,2084	0/0:18,0:18:39.10:0,39,690	0/0:23,0:23:67.45:0,67,1454	0/0:20,0:20:57.14:0,57,1145	0/0:12,0:12:23.28:0,23,450	0/0:30,0:30:84.11:0,84,1259	0/0:26,0:25:60.19:0,60,917	0/0:23,0:23:66.20:0,66,1441	0/0:27,0:27:78.24:0,78,1725	1/1:1,15:21:36.12:1197,36,0	0/0:27,0:27:75.25:0,75,1162	0/0:25,0:25:69.14:0,69,1032	0/0:10,0:10:20.95:0,21,214	0/0:12,0:12:20.94:0,21,199	0/0:26,0:26:38.72:0,39,328	0/0:19,0:19:45.14:0,45,687	0/0:16,0:16:29.99:0,30,420	0/0:23,0:23:60.19:0,60,908	0/0:15,0:14:39.13:0,39,850	0/0:19,0:19:57.08:0,57,1097	0/0:17,0:17:3:0,3,26	0/0:10,0:10:24.07:0,24,489
chr10	54718349	.	CGTGTGTGTGTGT	C	2110.78	PASS	AB=0.918;AC=30;AF=0.600;AN=50;BaseQRankSum=6.007;DP=672;FS=53.655;HRun=0;HaplotypeScore=197.2337;InbreedingCoeff=0.1398;MQ=69.69;MQ0=11;MQRankSum=-3.071;QD=4.81;ReadPosRankSum=-0.147;VQSLOD=1.0120;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:29,6:35:2.70:101,3,0	./.	./.	0/0:33,0:20:0:0,0,0	1/1:18,0:18:2.84:14,3,0	1/1:17,8:23:3.01:102,3,0	1/1:26,0:26:5.72:48,6,0	0/0:23,0:23:0.47:0,0,1	1/1:18,6:24:6.02:204,6,0	1/1:26,3:29:0.08:123,0,0	./.	0/1:20,0:20:22.96:23,0,39	0/1:27,0:26:59.52:60,0,89	1/1:21,0:21:0.88:2,1,0	0/1:20,7:27:15.33:194,0,15	1/1:17,0:25:9.03:251,9,0	1/1:23,9:33:7.07:302,7,0	1/1:21,1:24:7.84:208,8,0	0/0:27,0:25:8.86:0,9,231	0/0:8,0:8:6.02:0,6,205	0/0:56,0:55:24.05:0,24,539	0/0:17,0:16:11.96:0,12,120	0/1:11,0:12:60.77:72,0,61	0/1:29,0:35:32.11:45,0,32	1/1:19,0:22:3.01:84,3,0	0/1:21,0:20:20.65:117,0,21	0/0:15,0:15:2.37:0,2,8	1/1:7,5:12:9.03:306,9,0
chr10	54718688	.	A	AT	12874.22	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-10.896;DP=588;FS=4.985;HRun=8;HaplotypeScore=49.6876;InbreedingCoeff=0.9920;MQ=71.69;MQ0=0;MQRankSum=-2.084;QD=28.17;ReadPosRankSum=3.200;VQSLOD=5.3849;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,34:41:87.26:1004,87,0	0/0:11,0:11:26.99:0,27,242	0/0:10,0:9:23.04:0,23,193	0/0:10,0:10:17.99:0,18,164	1/1:2,15:17:48.13:546,48,0	1/1:2,24:26:66.20:762,66,0	1/1:0,19:19:51.15:589,51,0	1/1:4,18:23:57.15:646,57,0	1/1:2,20:22:48.14:554,48,0	1/1:1,19:20:57.14:638,57,0	1/1:1,14:15:11.65:388,12,0	1/1:1,20:21:54.16:623,54,0	1/1:1,22:23:60.18:689,60,0	1/1:1,21:22:57.17:658,57,0	1/1:6,19:25:48.14:554,48,0	0/0:22,0:22:54.02:0,54,494	1/1:5,38:43:96.29:1108,96,0	1/1:0,21:20:57.17:658,57,0	0/0:18,0:18:42.01:0,42,381	0/0:12,0:12:26.86:0,27,247	0/0:22,0:22:53.98:0,54,484	1/1:3,15:18:45.13:519,45,0	1/1:1,11:12:33.10:381,33,0	1/1:1,18:19:45.13:519,45,0	1/1:2,28:30:75.22:866,75,0	1/1:2,25:27:75.22:866,75,0	0/0:24,0:24:59.98:0,60,537	1/1:3,10:13:27.08:309,27,0
chr10	54722416	.	T	TC	28826.05	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=1.608;DP=745;FS=2.072;HRun=1;HaplotypeScore=127.1544;InbreedingCoeff=0.9994;MQ=84.24;MQ0=0;MQRankSum=-10.498;QD=41.06;ReadPosRankSum=5.733;VQSLOD=4.1478;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,31:31:78.26:1163,78,0	1/1:0,9:10:27.09:402,27,0	0/0:22,0:22:60.11:0,60,815	0/0:21,0:21:55.38:0,55,696	1/1:0,29:29:81.27:1210,81,0	1/1:0,30:30:81.27:1210,81,0	1/1:0,20:20:48.16:717,48,0	1/1:1,29:30:87:1219,87,0	1/1:0,28:28:81.27:1210,81,0	1/1:0,33:33:99:1402,99,0	1/1:0,23:23:66.22:992,66,0	1/1:0,26:26:69.23:1030,69,0	1/1:0,30:30:87.29:1300,87,0	1/1:1,26:27:75.20:1122,75,0	1/1:1,36:37:99:1612,108,0	1/1:0,18:18:45.15:672,45,0	1/1:0,17:17:45.15:673,45,0	1/1:0,26:26:75.25:1118,75,0	1/1:0,32:32:96.28:1381,96,0	1/1:0,54:54:99:2238,151,0	1/1:1,42:43:99:1746,117,0	1/1:0,23:23:60.20:899,60,0	1/1:0,25:25:72.24:1072,72,0	1/1:0,25:25:60.20:898,60,0	1/1:0,21:21:60.20:891,60,0	1/1:0,30:31:90.17:1308,90,0	1/1:0,18:18:54.18:807,54,0	1/1:0,15:15:36.12:535,36,0
chr10	54722945	.	C	CA	1842.03	PASS	AB=0.722;AC=6;AF=0.107;AN=56;BaseQRankSum=-10.777;DP=608;FS=0.000;HRun=8;HaplotypeScore=95.1841;InbreedingCoeff=0.5976;MQ=73.04;MQ0=0;MQRankSum=-1.331;QD=13.75;ReadPosRankSum=1.795;VQSLOD=3.4692;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:87.04:0,87,796	0/0:6,0:6:12:0,12,110	0/0:11,0:11:24:0,24,214	0/0:8,0:8:8.50:0,8,64	0/0:18,0:18:48.02:0,48,439	0/0:34,0:34:81.01:0,81,737	0/0:22,0:22:50.97:0,51,451	0/0:31,0:31:90.04:0,90,824	0/0:19,0:19:42:0,42,380	0/0:28,0:28:68.99:0,69,618	0/0:12,0:12:29.97:0,30,265	0/0:18,0:18:39.01:0,39,357	0/0:16,0:16:36:0,36,329	0/0:18,0:18:42.02:0,42,384	0/0:20,0:20:57.02:0,57,517	0/0:17,0:17:38.99:0,39,352	0/0:29,0:29:71.95:0,72,638	0/0:19,0:19:51:0,51,461	0/1:2,11:30:27.15:347,0,27	0/1:3,25:62:57.05:668,0,57	1/1:4,8:13:20.12:271,20,0	0/0:25,0:25:54.02:0,54,494	0/0:18,0:18:45:0,45,412	0/0:11,0:11:21.01:0,21,192	0/0:22,0:22:57.02:0,57,522	0/0:25,0:25:60.02:0,60,546	1/1:6,23:29:59.86:692,60,0	0/0:7,0:7:18.01:0,18,165
chr10	54722970	.	TA	T	912.59	PASS	AB=0.757;AC=3;AF=0.054;AN=56;BaseQRankSum=6.741;DP=621;FS=1.175;HRun=8;HaplotypeScore=123.4239;InbreedingCoeff=-0.0622;MQ=65.76;MQ0=0;MQRankSum=-7.479;QD=8.37;ReadPosRankSum=-0.125;VQSLOD=1.4263;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:87.17:0,87,1017	0/0:5,0:5:15.05:0,15,181	0/0:6,0:6:15.04:0,15,170	0/0:4,0:4:5.36:0,5,33	0/0:25,0:25:72.21:0,72,858	0/0:27,0:27:60.18:0,60,715	0/0:16,0:16:36.11:0,36,435	0/0:40,0:40:99:0,108,1304	0/0:17,0:17:48.15:0,48,579	0/0:30,0:30:84.24:0,84,994	0/0:15,0:15:42.13:0,42,501	0/0:31,0:31:75.15:0,75,887	0/0:14,0:14:39.12:0,39,471	0/0:18,0:18:51.16:0,51,616	0/0:21,1:22:31.26:0,31,660	0/0:16,0:16:45.14:0,45,544	0/0:29,0:29:66.17:0,66,778	0/0:18,0:18:51.14:0,51,603	0/1:18,14:32:99:344,0,356	0/1:36,27:63:99:625,0,747	0/1:12,2:14:43.59:44,0,344	0/0:24,0:24:69.18:0,69,802	0/0:23,0:23:60.18:0,60,725	0/0:11,0:11:24.06:0,24,279	0/0:25,0:25:72.19:0,72,845	0/0:25,0:25:66.20:0,66,788	0/0:27,0:27:72.20:0,72,857	0/0:10,0:10:30.08:0,30,350
chr10	54722994	.	T	TC	23070.44	PASS	AB=0.740;AC=43;AF=0.768;AN=56;BaseQRankSum=-12.053;DP=685;FS=0.727;HRun=2;HaplotypeScore=77.0793;InbreedingCoeff=0.6979;MQ=70.94;MQ0=0;MQRankSum=-3.321;QD=38.07;ReadPosRankSum=2.679;VQSLOD=5.4772;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,34:35:93.31:1436,93,0	0/0:7,0:7:21.04:0,21,273	0/0:15,0:15:32.25:0,32,429	0/0:11,0:10:24.55:0,25,302	1/1:1,27:28:81.14:1229,81,0	1/1:1,25:26:66.23:1050,66,0	1/1:0,11:11:30.10:478,30,0	1/1:0,35:36:99:1653,108,0	1/1:1,22:23:60.20:955,60,0	1/1:0,31:31:93.28:1437,93,0	1/1:0,14:14:39.13:621,39,0	1/1:0,32:32:84.29:1336,84,0	1/1:0,15:15:45.15:716,45,0	1/1:0,18:18:48.16:764,48,0	1/1:1,23:24:66.23:1050,66,0	0/0:16,0:16:48.16:0,48,668	1/1:0,31:31:81.28:1289,81,0	1/1:0,23:23:69.23:1087,69,0	0/1:19,17:36:99:732,0,571	0/1:33,30:63:99:1021,0,1113	0/1:16,3:19:80.84:81,0,550	1/1:0,32:33:93.31:1465,93,0	1/1:2,26:28:73.80:1150,74,0	1/1:0,14:14:36.12:573,36,0	1/1:0,30:30:81.28:1290,81,0	1/1:0,25:26:77.92:1180,78,0	0/0:30,0:30:87.25:0,87,1159	1/1:0,10:10:30.10:478,30,0
chr10	54723833	.	GTATTAAATTAA	G	2472.93	PASS	AB=0.705;AC=4;AF=0.077;AN=52;BaseQRankSum=9.199;DP=386;FS=2.339;HRun=0;HaplotypeScore=122.4679;InbreedingCoeff=0.3614;MQ=61.55;MQ0=0;MQRankSum=-4.583;QD=33.42;ReadPosRankSum=-0.510;VQSLOD=3.3567;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:42.11:0,42,1992	0/0:11,0:11:27.09:0,27,1344	./.	0/0:1,0:1:3.01:0,3,53	0/0:18,0:18:45.10:0,45,1449	0/0:20,0:20:54.12:0,54,2072	0/0:3,0:3:9.02:0,9,362	0/0:28,0:28:66.19:0,66,2209	0/0:8,0:8:18.04:0,18,812	0/0:15,0:15:39.13:0,39,2001	0/0:16,0:16:45.13:0,45,1901	0/0:9,0:9:24.06:0,24,1056	0/0:14,0:14:39.06:0,39,1550	0/0:11,0:11:24.05:0,24,1009	0/0:4,0:4:12.01:0,12,284	0/0:11,0:11:30.07:0,30,1215	0/0:27,0:27:69.19:0,69,3138	0/0:26,0:26:60.12:0,60,2494	0/1:16,8:24:99:283,0,1216	0/1:15,16:31:99:1027,0,1006	0/0:7,0:7:12.03:0,12,426	./.	0/0:7,0:7:12.01:0,12,208	0/0:7,0:7:9.02:0,9,361	0/0:13,0:13:33.09:0,33,1485	0/0:27,0:27:72.24:0,72,3684	1/1:1,18:19:39.13:1277,39,0	0/0:9,0:9:27.09:0,27,1333
chr10	54728289	.	ATCTCTCTC	A	1340.37	PASS	AB=0.943;AC=21;AF=0.457;AN=46;BaseQRankSum=1.607;DP=533;FS=0.000;HRun=0;HaplotypeScore=129.6996;InbreedingCoeff=0.4811;MQ=69.87;MQ0=20;MQRankSum=-4.535;QD=6.35;ReadPosRankSum=-0.769;VQSLOD=2.2227;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:21:6.49:0,6,225	1/1:3,0:3:3.01:40,3,0	0/0:29,0:19:0:0,0,0	./.	./.	1/1:14,0:14:5.98:57,6,0	1/1:15,4:20:9.03:205,9,0	0/0:29,0:28:5.28:0,5,15	1/1:14,2:17:6.02:149,6,0	1/1:20,0:18:3.01:48,3,0	./.	0/0:22,0:22:3.48:0,3,102	0/0:17,0:17:16.77:0,17,478	1/1:16,4:19:5.90:148,6,0	1/1:17,5:22:3.01:74,3,0	1/1:8,0:15:12.04:223,12,0	0/0:16,0:16:18.06:0,18,515	0/0:14,0:14:12.04:0,12,417	0/1:17,0:16:1.58:2,0,15	0/1:20,0:21:9.90:10,0,24	0/0:24,0:31:2.67:0,3,24	0/0:21,0:19:11.22:0,11,272	0/0:13,0:13:12.04:0,12,320	0/0:23,0:21:15.05:0,15,509	1/1:13,7:21:21.07:501,21,0	./.	0/1:18,0:19:39.33:39,0,107	./.
chr10	54728333	.	C	CTCTT	1260.86	PASS	AB=0.584;AC=13;AF=0.232;AN=56;BaseQRankSum=-0.865;DP=555;FS=10.811;HRun=0;HaplotypeScore=98.8171;InbreedingCoeff=0.7002;MQ=65.62;MQ0=21;MQRankSum=1.129;QD=6.64;ReadPosRankSum=-1.467;VQSLOD=1.4558;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:5,21:29:17.95:73,0,18	0/0:14,0:14:35.81:0,36,297	0/0:21,0:16:23.43:0,23,319	0/0:30,0:16:40.61:0,41,379	0/0:14,0:14:29.96:0,30,247	0/0:16,0:16:29.95:0,30,247	0/0:17,0:15:38.98:0,39,352	0/0:19,0:16:34.55:0,35,286	0/0:21,0:21:48.44:0,48,419	0/0:20,0:17:33.01:0,33,307	0/0:18,0:17:41.92:0,42,343	1/1:3,22:28:2.79:81,3,0	1/1:3,13:17:12.04:314,12,0	0/0:14,0:13:21:0,21,195	0/0:18,0:18:38.97:0,39,333	0/0:22,0:21:50.93:0,51,455	0/1:10,18:27:2.54:207,0,3	1/1:2,13:15:8.75:241,9,0	0/0:13,0:13:33.45:0,33,290	0/0:9,0:9:26.90:0,27,222	0/0:29,0:28:42.82:0,43,348	1/1:7,19:24:17.42:252,17,0	0/1:5,0:15:5.40:35,0,5	1/1:5,18:26:14.06:228,14,0	0/0:19,0:20:54:0,54,514	0/0:13,0:11:32.95:0,33,283	0/0:26,0:23:61.18:0,61,529	0/0:11,0:11:29.94:0,30,242
chr10	54730470	.	C	CCA	6038.04	PASS	AB=1.000;AC=24;AF=0.444;AN=54;BaseQRankSum=3.431;DP=330;FS=131.638;HRun=0;HaplotypeScore=80.1722;InbreedingCoeff=0.7265;MQ=77.99;MQ0=1;MQRankSum=-6.018;QD=29.89;ReadPosRankSum=8.243;VQSLOD=1.5281;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:27.43:0,27,224	./.	0/0:23,0:20:46.36:0,46,510	0/0:12,0:13:34.50:0,35,411	1/1:19,0:19:29.45:430,29,0	1/1:18,0:18:42.24:605,42,0	1/1:24,0:24:62.94:883,63,0	1/1:12,0:12:21.83:205,22,0	1/1:11,3:14:34.18:457,34,0	1/1:19,0:19:47.46:581,47,0	1/1:11,0:11:27.01:382,27,0	0/0:10,0:10:22.15:0,22,169	0/0:2,0:2:5.96:0,6,45	1/1:17,1:18:45.86:559,46,0	1/1:14,0:14:29.46:407,29,0	0/0:2,0:2:0.47:0,0,1	0/0:10,0:10:18.97:0,19,128	0/0:16,0:16:29.20:0,29,243	0/0:4,0:4:8.95:0,9,66	0/0:3,0:3:3:0,3,25	0/0:14,0:14:5.14:0,5,51	0/0:5,0:5:5.93:0,6,44	0/0:6,0:6:3.94:0,4,27	0/1:5,0:5:11.23:30,0,11	0/1:15,0:15:6.89:454,0,7	1/1:19,0:19:46.99:583,47,0	0/0:8,0:8:5.97:0,6,46	1/1:11,0:14:32.76:462,33,0
chr10	54730472	.	CA	C	3513.91	PASS	AC=48;AF=0.889;AN=54;BaseQRankSum=3.395;DP=335;FS=18.854;HRun=1;HaplotypeScore=81.9952;InbreedingCoeff=0.6734;MQ=81.32;MQ0=1;MQRankSum=-6.098;QD=11.95;ReadPosRankSum=2.079;VQSLOD=0.8509;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,0:12:29.09:233,29,0	./.	0/0:24,1:23:18.55:0,19,370	0/0:13,0:13:28.87:0,29,331	1/1:19,0:19:28.35:150,28,0	1/1:18,0:18:44.04:223,44,0	1/1:24,0:24:56.19:289,56,0	1/1:12,0:12:5.86:60,6,0	1/1:15,0:15:37.39:212,37,0	1/1:17,0:17:45.79:237,46,0	1/1:12,0:12:27.65:149,28,0	1/1:11,0:11:17.64:126,18,0	1/1:2,0:2:5.96:45,6,0	1/1:20,0:20:37.16:192,37,0	1/1:15,0:15:29.14:154,29,0	0/0:1,0:1:0:0,0,0	1/1:10,1:11:27.95:167,28,0	1/1:16,0:16:29.98:196,30,0	1/1:0,4:4:10.22:74,10,0	1/1:3,0:3:2.90:16,3,0	1/1:12,1:13:15.45:127,15,0	1/1:4,1:5:4.25:31,4,0	1/1:6,0:6:8.82:66,9,0	1/1:5,0:5:11.96:96,12,0	1/1:14,0:14:36.20:193,36,0	1/1:18,0:18:45.34:244,45,0	1/1:7,1:8:5.99:50,6,0	1/1:14,0:14:33.93:185,34,0
chr10	54730477	.	C	CCCC	6222.77	PASS	AB=1.000;AC=43;AF=0.796;AN=54;BaseQRankSum=-0.594;DP=350;FS=10.286;HRun=3;HaplotypeScore=104.7263;InbreedingCoeff=0.6133;MQ=78.56;MQ0=1;MQRankSum=-5.836;QD=20.40;ReadPosRankSum=2.632;VQSLOD=1.1305;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:13:9.88:77,10,0	./.	0/0:27,0:24:28.25:0,28,456	0/0:12,0:12:26.09:0,26,326	1/1:9,0:22:29.12:379,29,0	1/1:5,0:21:25.19:500,25,0	1/1:1,2:27:56.77:790,57,0	1/1:8,0:13:24.02:314,24,0	1/1:5,0:13:30.09:416,30,0	1/1:4,0:17:45.42:507,45,0	1/1:3,0:12:30.03:370,30,0	1/1:10,0:10:10.22:87,10,0	0/1:1,0:1:0:0,0,0	1/1:4,0:17:34.28:430,34,0	1/1:1,0:16:24.08:339,24,0	0/1:3,0:3:0.01:0,0,0	1/1:12,0:12:2.16:134,2,0	1/1:15,0:15:21.47:233,21,0	0/1:6,0:6:0.06:21,0,0	0/1:4,0:4:0:0,0,0	0/1:9,0:9:0.25:0,0,0	0/0:3,0:3:2.65:0,3,16	1/1:7,0:7:2.72:24,3,0	1/1:7,0:7:8.76:117,9,0	1/1:4,0:15:35.86:448,36,0	1/1:3,0:23:54.11:617,54,0	1/1:8,0:8:1.55:4,2,0	1/1:5,0:14:24.25:416,24,0
chr10	54731894	.	CT	C	3111.97	PASS	AB=0.691;AC=39;AF=0.696;AN=56;BaseQRankSum=4.535;DP=535;FS=6.299;HRun=15;HaplotypeScore=67.5326;InbreedingCoeff=0.2424;MQ=70.86;MQ0=1;MQRankSum=-2.242;QD=7.04;ReadPosRankSum=3.185;VQSLOD=2.7758;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,11:20:24.61:146,25,0	1/1:4,9:13:0.20:127,0,0	0/1:12,1:13:25.91:26,0,34	0/1:10,1:9:27.53:28,0,36	0/1:5,10:17:4.90:82,0,5	0/1:9,10:21:44.18:115,0,44	0/1:7,12:21:28.25:165,0,28	1/1:15,15:32:11.10:180,11,0	1/1:5,5:11:16.65:102,17,0	1/1:7,10:17:23.26:148,23,0	1/1:14,7:22:25.52:154,26,0	1/1:10,11:21:23.40:154,23,0	1/1:4,8:13:22.14:130,22,0	1/1:6,12:18:29.42:192,29,0	0/1:8,9:18:18.71:128,0,19	1/1:8,6:15:6.62:105,7,0	0/1:6,13:20:25.30:190,0,25	1/1:8,15:24:42.79:274,43,0	0/0:22,0:22:22.75:0,23,319	0/0:19,0:25:39.48:0,39,314	0/0:16,1:18:25.40:0,25,323	1/1:6,13:19:23.45:154,23,0	1/1:8,14:23:31.45:198,31,0	1/1:6,11:18:5.19:152,5,0	0/1:8,12:20:2.56:95,0,3	0/1:11,9:20:0.53:109,0,1	0/0:26,1:27:22.56:0,23,302	1/1:6,7:13:21.05:136,21,0
chr10	54732382	.	TTAGG	T	4695.86	PASS	AB=0.860;AC=23;AF=0.411;AN=56;BaseQRankSum=6.830;DP=818;FS=2.838;HRun=0;HaplotypeScore=123.0001;InbreedingCoeff=-0.0282;MQ=51.61;MQ0=70;MQRankSum=-3.031;QD=9.37;ReadPosRankSum=4.621;VQSLOD=4.0658;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:7,27:27:92.75:339,0,93	0/0:15,0:15:36.12:0,36,862	0/0:50,0:13:39.12:0,39,753	0/0:29,0:8:24.07:0,24,394	0/0:12,1:13:29.77:0,30,641	0/1:29,3:31:99:223,0,1071	0/1:22,0:21:59.09:59,0,883	0/0:23,0:20:59.57:0,60,1303	0/1:28,3:31:99:268,0,1195	0/1:33,4:36:99:217,0,1577	0/1:11,0:11:99:105,0,399	1/1:6,28:23:1.04:342,1,0	1/1:10,33:32:35.84:625,36,0	0/1:31,2:33:99:291,0,1391	0/1:29,3:32:99:526,0,938	0/0:47,0:47:99:0,120,2898	0/1:8,24:24:59.53:166,0,60	1/1:9,13:14:3.47:53,3,0	0/0:22,0:18:45.15:0,45,1110	0/0:26,0:26:69.22:0,69,1649	0/0:60,0:59:99:0,156,3742	1/1:4,16:15:17.69:210,18,0	0/1:6,17:20:97.91:98,0,207	1/1:8,36:38:19.87:702,20,0	0/1:14,0:13:65.12:65,0,522	0/1:20,3:23:99:230,0,758	0/0:32,0:32:84.27:0,84,2024	0/1:14,0:14:99:176,0,353
chr10	54732480	.	TTAGGTAGG	T	8764.89	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=15.542;DP=793;FS=15.199;HRun=0;HaplotypeScore=186.3306;InbreedingCoeff=0.9112;MQ=55.00;MQ0=29;MQRankSum=-11.021;QD=38.11;ReadPosRankSum=-2.269;VQSLOD=2.6948;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:33:91.58:0,92,2739	0/0:13,0:13:36.08:0,36,1124	0/0:36,0:13:36.07:0,36,711	0/0:36,0:16:45.09:0,45,920	1/1:4,18:21:33.69:586,34,0	1/1:2,16:18:25.02:706,25,0	1/1:1,16:16:12.04:297,12,0	0/1:21,0:10:32.11:53,0,32	1/1:6,12:18:16.73:544,17,0	1/1:4,21:23:54.16:1562,54,0	1/1:2,11:10:26.67:479,27,0	0/0:40,0:40:99:0,99,3436	0/0:44,0:44:99:0,114,3841	1/1:4,11:15:8.94:610,9,0	1/1:6,20:26:38.01:1030,38,0	0/0:52,0:52:99:0,129,4764	0/0:35,0:35:78.04:0,78,2488	0/0:25,0:24:45.15:0,45,1572	0/0:19,0:17:45.13:0,45,1356	0/0:33,0:31:72.24:0,72,2485	0/0:65,0:64:99:0,175,5897	0/0:38,0:32:90.31:0,90,3202	0/0:22,0:20:57.20:0,57,1961	0/0:37,0:37:93.26:0,93,3293	1/1:1,13:13:32.80:715,33,0	1/1:5,21:23:41.93:1394,42,0	0/0:34,0:34:81.26:0,81,2987	1/1:2,13:15:30.10:788,30,0
chr10	54735035	.	GAA	G	4221.91	PASS	AB=0.669;AC=28;AF=0.500;AN=56;BaseQRankSum=-10.901;DP=720;FS=18.057;HRun=15;HaplotypeScore=125.0574;InbreedingCoeff=0.4587;MQ=73.03;MQ0=11;MQRankSum=-0.318;QD=9.26;ReadPosRankSum=3.234;VQSLOD=1.9824;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,16:29:6.49:242,6,0	1/1:3,12:16:29.58:245,30,0	0/0:59,0:22:12.41:0,12,122	0/1:52,0:26:0.50:0,0,160	0/0:13,1:31:11.52:0,12,216	0/1:7,5:36:91.13:91,0,99	0/0:8,0:24:41.45:0,41,219	0/0:13,1:20:11.39:0,11,161	0/0:7,0:18:29.94:0,30,104	0/0:7,1:20:12.62:0,13,147	0/0:8,0:24:14.08:0,14,133	0/1:8,5:14:5.24:76,0,5	1/1:8,9:19:31.40:216,31,0	0/0:14,1:28:25.80:0,26,359	0/1:8,2:27:27.43:27,0,148	0/1:4,12:16:7.48:208,0,7	1/1:9,25:37:47.28:467,47,0	1/1:5,15:26:49.27:403,49,0	0/1:12,8:21:37.67:155,0,38	1/1:9,22:34:35.39:493,35,0	1/1:6,13:23:14.24:233,14,0	1/1:3,13:17:17.58:193,18,0	0/1:5,11:19:8.40:188,0,8	1/1:2,14:19:41.30:385,41,0	0/1:10,2:18:65.59:66,0,101	0/0:9,0:30:31.03:0,31,229	1/1:7,23:30:62.69:535,63,0	0/0:6,0:9:13.95:0,14,85
chr10	54736432	.	CCACACACA	C	6520.20	PASS	AB=0.771;AC=28;AF=0.500;AN=56;BaseQRankSum=8.934;DP=514;FS=2.936;HRun=0;HaplotypeScore=143.9008;InbreedingCoeff=0.6357;MQ=54.82;MQ0=14;MQRankSum=-7.679;QD=23.12;ReadPosRankSum=0.558;VQSLOD=4.6406;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:28:63.22:0,63,2302	0/0:6,0:7:9.03:0,9,304	0/0:28,0:10:3.01:0,3,79	0/0:23,0:10:13.24:0,13,268	1/1:10,15:27:41.88:817,42,0	1/1:5,20:24:39.13:992,39,0	1/1:3,5:6:6.02:153,6,0	1/1:18,8:27:22.24:417,22,0	1/1:3,12:17:30.10:725,30,0	1/1:11,16:26:42.07:822,42,0	1/1:8,9:19:23.97:511,24,0	0/0:12,0:12:30.10:0,30,1207	0/0:13,0:14:33.11:0,33,949	1/1:4,7:11:9.03:230,9,0	1/1:3,10:12:8.32:229,8,0	0/0:5,0:13:24.07:0,24,720	0/0:21,0:23:39.12:0,39,1395	0/0:33,0:33:69.24:0,69,2539	0/1:13,1:20:31.47:118,0,31	0/1:8,0:26:58.50:81,0,59	0/1:9,0:7:16.48:56,0,16	0/0:14,0:14:30.10:0,30,1113	0/0:12,0:12:21.07:0,21,726	0/0:24,0:25:63.22:0,63,2300	1/1:7,4:10:6.02:153,6,0	1/1:1,13:15:42.13:935,42,0	0/1:14,0:19:5.21:127,0,5	1/1:1,4:5:6.02:153,6,0
chr10	54736565	.	C	CA	2459.91	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=-7.806;DP=522;FS=2.095;HRun=7;HaplotypeScore=56.9447;InbreedingCoeff=0.8695;MQ=69.49;MQ0=0;MQRankSum=-0.829;QD=25.62;ReadPosRankSum=-1.444;VQSLOD=3.5757;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:35:95.14:0,95,889	0/0:6,0:6:12:0,12,110	0/1:9,0:8:9.68:10,0,147	0/0:11,0:11:23.86:0,24,212	0/0:20,0:20:57.08:0,57,544	0/0:28,0:28:72.10:0,72,689	0/0:28,0:28:75.12:0,75,724	0/0:24,0:23:54.08:0,54,521	0/0:18,0:18:45.06:0,45,434	0/0:18,0:18:45.07:0,45,435	0/0:12,0:12:36.06:0,36,348	0/0:18,0:18:51.08:0,51,493	0/0:17,0:17:48.04:0,48,450	0/0:8,0:8:24.04:0,24,232	0/0:24,0:24:69.10:0,69,661	0/0:21,0:21:51.08:0,51,492	0/0:28,0:28:78.11:0,78,747	0/0:20,0:20:48.07:0,48,463	1/1:2,21:23:63.15:745,63,0	1/1:0,13:13:39.04:438,39,0	1/1:3,23:28:68.94:790,69,0	0/0:11,0:11:30.05:0,30,290	0/0:8,0:8:24.04:0,24,232	0/0:31,0:30:75.11:0,75,724	0/0:12,0:12:30.05:0,30,290	0/0:21,0:21:57.05:0,57,536	1/1:3,20:23:54.15:641,54,0	0/0:7,0:7:21.03:0,21,203
chr10	54738345	.	A	AT	19032.71	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=1.884;DP=669;FS=4.850;HRun=6;HaplotypeScore=189.7285;InbreedingCoeff=0.9981;MQ=68.43;MQ0=0;MQRankSum=-8.057;QD=29.97;ReadPosRankSum=5.490;VQSLOD=2.2896;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,14:18:27.09:337,27,0	1/1:1,13:14:39.09:473,39,0	0/0:16,0:16:45.09:0,45,449	0/0:18,0:18:31.71:0,32,354	1/1:2,24:26:66.17:811,66,0	1/1:2,15:17:45.11:549,45,0	1/1:4,13:17:42.13:528,42,0	1/1:9,25:34:84.24:1027,84,0	1/1:3,27:30:75.14:909,75,0	1/1:4,34:38:98.32:1208,98,0	1/1:2,22:25:54.17:678,54,0	1/1:6,32:38:96.15:1136,96,0	1/1:1,23:24:69.14:826,69,0	1/1:4,27:31:75.08:873,75,0	1/1:6,28:34:87.16:1041,87,0	1/1:4,24:28:75.21:926,75,0	1/1:3,18:21:45.06:566,45,0	1/1:4,9:13:27.09:339,27,0	1/1:6,8:14:27.04:322,27,0	1/1:1,27:28:78.14:943,78,0	1/1:2,20:22:45.06:528,45,0	1/1:1,29:30:87.24:1076,87,0	1/1:1,18:19:51.12:623,51,0	1/1:2,25:27:57.01:671,57,0	1/1:5,23:28:60.19:754,60,0	1/1:0,23:23:66.20:816,66,0	1/1:6,14:20:41.10:545,41,0	1/1:2,14:16:42.13:527,42,0
chr10	54738379	.	T	TGTGCATTC	27513.75	PASS	AB=0.989;AC=31;AF=0.554;AN=56;BaseQRankSum=7.906;DP=949;FS=17.028;HRun=0;HaplotypeScore=516.7655;InbreedingCoeff=-0.5155;MQ=41.87;MQ0=5;MQRankSum=-12.222;QD=30.57;ReadPosRankSum=7.244;VQSLOD=2.9614;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:23,1:24:99:304,0,260	0/1:20,0:20:54.30:353,0,54	0/0:17,0:12:35.78:0,36,780	0/0:32,0:10:23.43:0,23,418	0/1:39,0:39:15.10:782,0,15	0/1:31,1:32:80.29:511,0,80	0/1:33,0:33:99:683,0,142	0/1:46,0:43:99:1892,0,316	0/1:41,2:43:43.77:1650,0,44	0/1:45,1:46:99:2705,0,271	1/1:30,0:30:62.38:770,62,0	0/1:45,0:45:99:1464,0,163	1/1:36,0:36:95.53:1740,96,0	1/1:56,3:58:46.43:2270,46,0	0/1:39,1:40:99:1155,0,105	0/1:32,1:33:99:869,0,213	0/1:31,0:31:99:881,0,393	0/1:21,0:20:99:479,0,179	0/1:28,0:27:99:1237,0,276	0/1:32,0:32:99:557,0,195	0/1:43,0:43:99:315,0,222	1/1:33,0:33:40.52:696,41,0	0/1:24,0:24:99:234,0,194	0/1:36,0:36:99:260,0,311	1/1:32,3:35:89.45:1174,89,0	0/1:44,2:46:99:2951,0,102	0/1:26,0:26:20.48:984,0,20	0/1:19,0:19:99:597,0,161
chr10	54738384	.	ATG	A	2594.70	PASS	AB=0.830;AC=23;AF=0.426;AN=54;BaseQRankSum=-4.085;DP=963;FS=2.253;HRun=0;HaplotypeScore=356.0730;InbreedingCoeff=0.0277;MQ=39.58;MQ0=8;MQRankSum=1.861;QD=3.92;ReadPosRankSum=-2.238;VQSLOD=1.1164;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:27.09:0,27,415	0/1:19,1:20:15.02:29,0,15	./.	0/0:30,0:7:0:0,0,0	1/1:28,12:40:11.67:120,12,0	0/1:14,18:34:1.76:62,0,2	0/1:14,17:32:21.17:155,0,21	0/1:37,10:44:99:416,0,159	0/1:29,14:44:43.90:125,0,44	0/1:31,14:46:99:526,0,229	1/1:21,11:32:11.79:141,12,0	0/1:45,1:46:15.17:15,0,227	0/0:37,0:37:15.50:0,15,136	1/1:30,27:58:5.21:49,5,0	1/1:24,15:40:15.04:176,15,0	0/1:32,1:33:6.55:7,0,317	0/1:27,3:30:36.99:37,0,366	0/0:25,0:24:40.62:0,41,559	0/1:26,1:25:2.83:3,0,236	0/1:31,1:32:55.46:55,0,127	0/0:43,0:43:21.54:0,22,321	0/0:33,1:34:8.81:0,9,134	0/0:24,0:24:18.06:0,18,280	0/0:35,0:35:21.07:0,21,331	0/1:23,11:35:18.43:29,0,18	0/1:27,19:46:99:666,0,143	0/0:26,0:26:26.32:0,26,300	1/1:14,4:19:14.88:155,15,0
chr10	54738385	.	T	TTC	6694.09	PASS	AB=0.804;AC=27;AF=0.482;AN=56;BaseQRankSum=16.216;DP=930;FS=13.809;HRun=0;HaplotypeScore=332.6110;InbreedingCoeff=-0.7768;MQ=39.93;MQ0=9;MQRankSum=-10.266;QD=7.63;ReadPosRankSum=-1.712;VQSLOD=2.8828;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:20,6:26:66.54:67,0,394	0/1:13,6:19:12.65:68,0,13	0/0:22,0:12:21.10:0,21,407	0/0:31,0:7:17.54:0,18,208	0/1:29,10:39:59.25:276,0,59	0/1:25,8:33:56.17:56,0,58	0/1:24,5:29:40.98:41,0,134	0/1:33,9:39:99:766,0,446	0/1:26,14:40:71.70:373,0,72	0/1:32,14:46:99:944,0,378	0/1:22,8:30:61.59:171,0,62	0/1:32,13:45:99:254,0,249	0/1:21,15:36:27.66:396,0,28	0/1:40,17:56:7.33:248,0,7	0/1:29,10:39:74.05:249,0,74	0/1:24,10:34:99:120,0,341	0/1:25,3:28:99:167,0,446	0/1:20,4:24:99:163,0,529	0/1:16,6:20:99:456,0,287	0/1:20,12:32:99:184,0,153	0/1:40,2:42:79.77:80,0,307	0/1:26,6:32:99:141,0,117	0/1:18,6:24:33.65:34,0,264	0/1:27,6:33:30.99:31,0,313	1/1:25,9:34:13.81:228,14,0	0/1:34,13:47:99:812,0,531	0/1:17,9:26:99:277,0,205	0/1:15,2:17:91.34:91,0,131
chr10	54738386	.	G	GTGTGCGTGTATGTGTGTA	29294.68	PASS	AB=0.998;AC=34;AF=0.607;AN=56;BaseQRankSum=5.120;DP=927;FS=2.270;HRun=0;HaplotypeScore=621.7831;InbreedingCoeff=-0.1020;MQ=39.58;MQ0=9;MQRankSum=-7.285;QD=36.30;ReadPosRankSum=9.857;VQSLOD=0.0100;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:26.65:0,27,359	1/1:19,0:19:3.08:497,3,0	0/0:21,0:11:20.02:0,20,319	0/0:31,0:6:10.49:0,10,160	0/1:39,0:39:12.58:353,0,13	1/1:32,1:33:6.65:653,7,0	1/1:30,0:30:8.15:896,8,0	0/1:42,0:39:76.12:1716,0,76	1/1:38,2:40:26.06:1904,26,0	0/1:45,0:45:70.38:2513,0,70	1/1:30,0:30:14.89:661,15,0	0/1:45,0:45:99:1699,0,222	0/1:36,0:36:99:1739,0,136	1/1:55,3:57:43.03:3944,43,0	1/1:39,0:39:9.57:1170,10,0	0/1:30,1:32:99:1147,0,235	0/1:29,0:29:99:1375,0,142	0/1:25,0:24:99:606,0,384	0/1:23,0:21:70.54:71,0,293	0/1:33,0:33:99:302,0,120	0/0:42,0:42:22.81:0,23,330	0/1:32,0:32:73.18:383,0,73	0/1:24,0:24:99:201,0,211	0/1:35,0:35:99:332,0,257	1/1:32,1:33:24.08:1358,24,0	1/1:43,2:45:37.55:4392,38,0	0/1:26,0:26:99:739,0,134	1/1:14,0:14:13.43:645,13,0
chr10	54739146	.	AACACACACACACACACACACAC	A	3482.21	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=6.373;DP=561;FS=2.004;HRun=0;HaplotypeScore=274.3567;InbreedingCoeff=0.7985;MQ=64.52;MQ0=6;MQRankSum=-3.844;QD=41.45;ReadPosRankSum=2.147;VQSLOD=2.2465;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:20:9.92:0,10,876	0/0:4,0:5:6.02:0,6,491	0/0:27,0:20:15.05:0,15,874	0/0:27,0:21:18.06:0,18,843	0/0:16,0:16:15.05:0,15,1244	0/0:22,0:23:21.07:0,21,1357	0/0:15,0:15:15.05:0,15,968	0/0:23,0:23:36.40:0,36,2141	0/0:18,0:18:15.05:0,15,1009	0/0:28,0:27:57.20:0,57,4467	0/0:16,0:15:9.92:0,10,833	0/0:21,0:21:23.89:0,24,1508	0/0:19,0:19:36.12:0,36,2166	0/0:12,0:17:9.08:0,9,420	0/0:17,0:16:18.06:0,18,1419	0/0:11,0:19:15.05:0,15,1191	0/0:26,0:29:63.21:0,63,5091	0/0:16,0:19:39.13:0,39,2744	1/1:6,3:9:6.02:252,6,0	1/1:13,14:27:30.06:1486,30,0	1/1:17,6:22:3.01:175,3,0	0/0:19,0:17:18.06:0,18,1150	0/0:17,0:17:9.03:0,9,617	0/0:20,0:20:11.96:0,12,803	0/0:27,0:26:21.05:0,21,984	0/0:17,0:15:33.11:0,33,2532	1/1:13,12:25:26.90:1570,27,0	0/0:14,0:14:18.98:0,19,1122
chr10	54739561	.	TGAA	T	9377.08	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=7.712;DP=759;FS=1.741;HRun=0;HaplotypeScore=120.2570;InbreedingCoeff=0.9942;MQ=91.92;MQ0=0;MQRankSum=-6.728;QD=37.96;ReadPosRankSum=3.809;VQSLOD=5.8949;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,36:38:93.27:1516,93,0	1/1:0,7:7:12.04:198,12,0	0/0:38,0:38:99:0,105,2322	0/0:27,0:27:75.23:0,75,1561	0/0:25,0:25:69.24:0,69,1564	0/0:18,0:18:51.18:0,51,1156	0/0:19,0:19:54.19:0,54,1223	0/0:34,0:34:93.21:0,93,1897	0/0:29,0:29:81.28:0,81,1772	0/0:32,0:31:81.26:0,81,1754	0/0:17,0:17:51.17:0,51,1129	1/1:1,28:29:72.25:1197,72,0	1/1:2,36:38:87.30:1449,87,0	0/0:39,0:39:99:0,117,2652	0/0:29,0:29:87.28:0,87,1855	1/1:1,28:29:72.25:1198,72,0	1/1:0,25:25:54.18:899,54,0	1/1:0,9:9:18.06:300,18,0	0/0:32,0:32:93.32:0,93,2077	0/0:26,0:26:78.27:0,78,1738	0/0:31,0:31:87.30:0,87,1967	1/1:2,23:25:60.12:938,60,0	1/1:1,26:27:57.11:883,57,0	1/1:1,19:20:48.01:798,48,0	0/0:31,0:31:90.30:0,90,1995	0/0:32,0:32:96.31:0,96,2095	0/0:32,0:31:84.29:0,84,1903	0/0:21,0:21:60.18:0,60,1302
chr10	54740749	.	AT	A	8262.10	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=15.618;DP=577;FS=10.193;HRun=3;HaplotypeScore=59.1875;InbreedingCoeff=0.9980;MQ=70.18;MQ0=0;MQRankSum=-2.242;QD=35.61;ReadPosRankSum=0.492;VQSLOD=4.8594;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:87.24:0,87,1211	0/0:8,0:8:24.08:0,24,345	0/0:8,0:7:18.03:0,18,238	0/0:10,0:9:21.07:0,21,294	1/1:0,23:23:69.22:851,69,0	1/1:1,12:13:36.11:446,36,0	1/1:0,22:22:63.20:781,63,0	1/1:1,17:18:51.15:620,51,0	1/1:1,17:18:51.16:632,51,0	1/1:0,27:27:81.25:1004,81,0	1/1:0,13:13:33.10:409,33,0	0/0:21,0:21:63.21:0,63,907	0/0:26,0:26:75.24:0,75,1064	1/1:0,21:21:63.20:780,63,0	1/1:2,16:18:51.15:621,51,0	0/0:20,0:20:57.19:0,57,821	0/0:36,0:36:99:0,105,1434	0/0:27,0:27:81.26:0,81,1145	0/0:16,0:16:48.15:0,48,675	0/0:25,0:25:72.24:0,72,1036	0/0:25,0:25:72.23:0,72,1019	0/0:23,0:23:66.22:0,66,950	0/0:24,0:24:72.23:0,72,1019	0/0:27,0:27:78.25:0,78,1102	1/1:1,16:17:48.15:595,48,0	1/1:1,25:26:78.25:965,78,0	0/0:20,0:19:54.18:0,54,773	1/1:1,15:16:45.14:557,45,0
chr10	54740814	.	G	GC	8212.92	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-7.346;DP=534;FS=8.634;HRun=1;HaplotypeScore=56.5500;InbreedingCoeff=0.9955;MQ=91.51;MQ0=0;MQRankSum=-4.306;QD=39.11;ReadPosRankSum=-1.607;VQSLOD=4.3402;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:69.18:0,69,872	0/0:4,0:4:12.04:0,12,156	0/0:27,0:27:75.21:0,75,938	0/0:19,0:19:40.90:0,41,463	1/1:1,16:17:48.14:689,48,0	1/1:0,18:18:48.16:717,48,0	1/1:3,15:18:51.15:724,51,0	1/1:2,23:25:66.19:963,66,0	1/1:1,16:17:45.14:652,45,0	1/1:5,8:13:33.03:444,33,0	1/1:3,10:13:36.12:522,36,0	0/0:19,0:19:51.17:0,51,662	0/0:19,0:19:54.16:0,54,685	1/1:3,23:26:63.19:904,63,0	1/1:0,13:13:39.13:584,39,0	0/0:21,0:21:54.16:0,54,686	0/0:32,0:32:93.30:0,93,1205	0/0:27,0:27:78.25:0,78,1008	0/0:16,0:16:48.11:0,48,592	0/0:18,0:18:51.16:0,51,658	0/0:21,0:21:57.19:0,57,740	0/0:23,0:23:69.22:0,69,894	0/0:10,0:10:30.10:0,30,389	0/0:23,0:23:69.22:0,69,896	1/1:0,14:14:39.13:584,39,0	1/1:5,19:24:69.22:1003,69,0	0/0:21,0:21:57.19:0,57,739	1/1:0,12:12:30.08:428,30,0
chr10	54742236	.	C	CTT	3051.53	PASS	AB=0.977;AC=26;AF=0.464;AN=56;BaseQRankSum=4.450;DP=568;FS=2.370;HRun=13;HaplotypeScore=93.1523;InbreedingCoeff=0.8012;MQ=63.98;MQ0=2;MQRankSum=-2.252;QD=12.35;ReadPosRankSum=-3.901;VQSLOD=1.9359;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:37:16.89:0,17,413	0/0:6,0:7:20.73:0,21,167	0/0:20,0:10:16.49:0,16,106	0/1:15,0:9:3.30:3,0,14	1/1:5,9:14:24.95:188,25,0	1/1:3,8:11:15.05:198,15,0	1/1:12,6:18:30.50:360,30,0	1/1:16,9:24:18.36:418,18,0	1/1:1,10:11:9.03:122,9,0	1/1:16,3:19:28.82:285,29,0	1/1:11,7:19:38.44:389,38,0	0/0:27,0:29:17.21:0,17,298	0/0:18,0:19:40.76:0,41,324	1/1:2,6:8:3.01:41,3,0	1/1:9,10:17:25.76:286,26,0	0/1:20,1:21:8.83:9,0,342	0/0:28,0:29:61.05:0,61,573	0/0:23,0:23:4.38:0,4,211	0/0:23,0:24:27.92:0,28,311	0/0:19,0:19:35.53:0,36,286	0/0:27,0:28:29.83:0,30,352	0/0:16,0:17:12.83:0,13,149	0/0:15,0:17:3.25:0,3,193	0/0:28,0:29:69.64:0,70,554	1/1:5,13:19:20.45:228,20,0	1/1:8,18:26:47.29:439,47,0	0/0:17,0:20:25.96:0,26,310	1/1:12,4:17:30.84:300,31,0
chr10	54742359	.	C	CT	2457.29	PASS	AB=1.000;AC=33;AF=0.611;AN=54;BaseQRankSum=-3.095;DP=315;FS=1.938;HRun=11;HaplotypeScore=55.5808;InbreedingCoeff=0.5715;MQ=74.10;MQ0=4;MQRankSum=0.405;QD=12.05;ReadPosRankSum=3.189;VQSLOD=3.3508;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,23:29:39.72:570,40,0	0/0:6,0:6:5.54:0,6,46	0/1:19,0:15:21.02:21,0,49	0/0:12,0:8:2.71:0,3,22	0/0:4,0:3:2.44:0,2,6	1/1:4,0:4:0.61:1,1,0	0/1:2,0:2:0:0,0,0	1/1:3,0:2:0.77:2,1,0	0/1:3,0:2:0:0,0,0	1/1:2,0:2:0.89:2,1,0	1/1:3,0:2:3.41:18,3,0	1/1:4,10:15:23.84:216,24,0	1/1:1,9:10:18.04:182,18,0	1/1:4,0:1:0.47:1,0,0	0/1:5,0:2:0:0,0,0	0/0:12,0:13:28.93:0,29,214	1/1:7,22:29:38.43:487,38,0	1/1:6,13:17:42.06:417,42,0	0/0:19,0:20:40.57:0,41,304	0/0:17,0:19:48.82:0,49,360	0/0:15,0:15:29.86:0,30,232	1/1:8,14:23:2.64:244,3,0	1/1:3,7:11:20.88:197,21,0	1/1:5,12:17:6.82:251,7,0	1/1:1,0:1:0.47:1,0,0	0/1:3,0:2:0:1,0,0	0/0:21,0:22:40.82:0,41,308	./.
chr10	54742541	.	A	AT	8403.93	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-2.602;DP=566;FS=9.541;HRun=10;HaplotypeScore=66.7305;InbreedingCoeff=0.8937;MQ=74.04;MQ0=0;MQRankSum=-1.083;QD=19.19;ReadPosRankSum=3.799;VQSLOD=5.4215;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,0:30:59.88:310,60,0	1/1:1,10:11:27.07:288,27,0	0/0:14,0:13:3.39:0,3,112	0/0:13,0:13:0.21:0,0,141	1/1:3,16:19:26.42:473,26,0	1/1:6,17:23:36.09:384,36,0	1/1:2,8:10:21.05:224,21,0	1/1:6,20:26:60.12:623,60,0	1/1:1,15:16:33.08:352,33,0	1/1:7,20:27:60.08:605,60,0	1/1:1,22:23:62.65:620,63,0	1/1:3,0:21:51.47:275,51,0	1/1:1,0:23:45.56:229,46,0	1/1:2,23:25:62.92:698,63,0	1/1:1,16:17:42.11:448,42,0	1/1:3,19:22:54.14:576,54,0	1/1:2,2:23:51.50:292,52,0	1/1:4,1:29:68.48:361,68,0	0/0:17,0:17:44.79:0,45,350	0/0:34,1:36:65.49:0,65,717	0/0:13,0:13:32.94:0,33,271	1/1:3,0:15:34.40:181,34,0	1/1:5,0:19:31.28:157,31,0	1/1:2,0:11:25.57:128,26,0	1/1:0,15:15:39.10:416,39,0	1/1:5,18:23:7.82:475,8,0	0/0:35,0:34:98.79:0,99,799	1/1:0,10:10:27.07:288,27,0
chr10	54743013	.	G	GT	3463.74	PASS	AB=0.952;AC=28;AF=0.500;AN=56;BaseQRankSum=8.151;DP=533;FS=5.165;HRun=10;HaplotypeScore=83.7477;InbreedingCoeff=0.8177;MQ=71.50;MQ0=1;MQRankSum=0.730;QD=14.14;ReadPosRankSum=1.182;VQSLOD=3.9595;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:24:2.61:199,3,0	1/1:8,0:8:20.45:127,20,0	0/0:16,0:16:23.15:0,23,174	0/0:14,0:11:14.95:0,15,119	0/0:22,0:23:52.93:0,53,421	0/0:19,0:19:44.93:0,45,369	0/1:17,2:19:19.06:19,0,275	0/0:36,0:36:75.72:0,76,613	0/0:27,0:27:65.88:0,66,538	0/0:29,0:29:65.89:0,66,540	0/0:26,0:26:59.91:0,60,493	1/1:13,0:13:34.20:188,34,0	1/1:17,0:17:23.93:132,24,0	0/0:16,0:16:35.68:0,36,295	0/0:24,0:24:47.83:0,48,387	1/1:18,0:18:17.38:175,17,0	1/1:17,0:17:42.85:225,43,0	1/1:13,0:13:31.38:162,31,0	1/1:3,12:14:36.09:384,36,0	1/1:4,18:22:51.10:531,51,0	1/1:1,9:10:24.06:256,24,0	0/1:5,0:5:12.92:13,0,30	1/1:13,0:13:6.65:88,7,0	1/1:21,0:21:48.82:266,49,0	0/0:21,0:21:59.92:0,60,493	0/0:24,0:25:70.96:0,71,572	1/1:4,26:30:47.49:698,47,0	0/0:11,0:11:20.92:0,21,172
chr10	54743023	.	T	TA	4725.96	PASS	AB=0.986;AC=25;AF=0.446;AN=56;BaseQRankSum=9.398;DP=523;FS=11.187;HRun=2;HaplotypeScore=73.0303;InbreedingCoeff=0.7316;MQ=60.80;MQ0=3;MQRankSum=0.846;QD=20.37;ReadPosRankSum=3.079;VQSLOD=3.6965;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,17:23:40.41:649,40,0	1/1:0,8:8:21.07:279,21,0	0/0:12,0:9:26.73:0,27,272	0/0:11,0:7:14.94:0,15,150	0/0:21,0:21:54.07:0,54,634	0/0:18,0:18:51.13:0,51,604	0/0:20,0:20:38.50:0,39,534	0/0:34,0:34:93.12:0,93,1044	0/0:25,0:25:72.17:0,72,847	0/0:22,0:22:63.19:0,63,767	0/0:24,0:24:69.18:0,69,818	1/1:1,13:14:36.12:479,36,0	1/1:1,14:16:32.92:397,33,0	0/0:18,0:18:45.12:0,45,523	0/0:21,0:21:51.13:0,51,603	1/1:1,15:16:39.13:521,39,0	1/1:0,18:18:48.12:622,48,0	1/1:0,13:13:36.01:457,36,0	0/1:17,0:15:23.52:34,0,24	0/1:21,0:22:27.85:85,0,28	1/1:11,0:11:1.24:34,1,0	1/1:1,3:4:6.02:80,6,0	1/1:1,15:16:9.22:303,9,0	1/1:1,21:22:51.17:681,51,0	0/0:23,0:23:66.18:0,66,789	0/0:29,0:28:84.13:0,84,961	0/1:30,0:30:10.74:103,0,11	0/0:13,0:13:39.03:0,39,409
chr10	54743310	.	GGTGTGTGTGTGTGTGT	G	5509.97	PASS	AB=0.875;AC=17;AF=0.315;AN=54;BaseQRankSum=4.794;DP=529;FS=0.000;HRun=0;HaplotypeScore=203.1579;InbreedingCoeff=0.6472;MQ=53.36;MQ0=16;MQRankSum=-5.994;QD=29.78;ReadPosRankSum=1.764;VQSLOD=3.2200;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:13,10:23:24.08:925,24,0	1/1:3,5:6:12.04:489,12,0	0/1:32,0:12:17.57:18,0,32	0/0:40,0:9:9.61:0,10,436	0/0:13,0:22:10.27:0,10,597	0/0:9,0:14:9.03:0,9,452	0/0:14,0:19:21.11:0,21,856	0/0:28,0:28:36.12:0,36,1923	0/0:6,0:13:18.06:0,18,1252	0/0:20,0:18:13.14:0,13,2243	0/0:18,0:22:26.11:0,26,1191	1/1:8,7:16:20.81:906,21,0	1/1:12,6:19:18.06:773,18,0	0/0:12,0:16:15.05:0,15,1010	0/0:8,0:16:24.08:0,24,1549	1/1:13,6:19:15.05:662,15,0	0/1:17,9:26:99:903,0,191	0/1:13,2:14:99:120,0,212	0/0:20,0:24:20.56:0,21,424	0/0:9,0:15:15.05:0,15,510	0/0:9,0:12:9.03:0,9,190	1/1:5,1:7:9.03:213,9,0	1/1:9,10:19:11.83:502,12,0	./.	0/0:15,0:21:21.07:0,21,1305	0/0:18,0:18:36.12:0,36,2302	0/0:12,0:24:16.50:0,16,745	0/0:1,0:3:3.01:0,3,210
chr10	54745742	.	GACACACAC	G	968.35	PASS	AB=0.941;AC=19;AF=0.365;AN=52;BaseQRankSum=2.456;DP=495;FS=2.188;HRun=0;HaplotypeScore=119.9394;InbreedingCoeff=0.5314;MQ=74.76;MQ0=7;MQRankSum=-4.325;QD=5.41;ReadPosRankSum=1.683;VQSLOD=2.0630;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:35,0:34:1.04:22,1,0	1/1:3,0:7:3.01:56,3,0	0/0:35,0:23:0.47:0,0,1	./.	0/0:8,0:8:6.02:0,6,120	0/1:15,0:16:8.42:8,0,250	0/0:18,0:19:9.01:0,9,152	./.	0/0:17,0:19:18.49:0,18,312	0/0:19,0:19:19.29:0,19,318	0/0:8,0:8:9:0,9,169	1/1:10,7:18:12.04:278,12,0	1/1:11,7:18:6.02:148,6,0	0/0:14,0:14:9.47:0,9,168	0/0:17,0:19:11.66:0,12,271	1/1:14,0:22:15.05:279,15,0	1/1:17,0:18:10.94:111,11,0	1/1:5,5:10:6.02:148,6,0	0/0:13,0:16:11.97:0,12,104	0/0:5,0:9:2.99:0,3,24	0/0:30,0:42:0.09:0,0,158	0/0:11,1:12:2.99:0,3,24	1/1:7,0:7:3.01:39,3,0	1/1:18,8:27:2.98:39,3,0	0/0:13,0:13:15.50:0,16,257	0/0:8,0:8:3.01:0,3,107	0/0:11,0:14:10.94:0,11,107	0/0:6,0:7:2.99:0,3,24
chr10	54746148	.	GTT	G	6173.39	PASS	AB=0.606;AC=30;AF=0.536;AN=56;BaseQRankSum=-15.114;DP=573;FS=4.628;HRun=14;HaplotypeScore=115.6106;InbreedingCoeff=0.8662;MQ=74.99;MQ0=11;MQRankSum=2.560;QD=17.49;ReadPosRankSum=-3.031;VQSLOD=3.1369;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:71.98:0,72,622	0/0:8,0:8:21:0,21,182	0/0:22,0:16:18.43:0,18,230	0/0:22,0:14:20.58:0,21,241	1/1:4,18:24:56.52:494,57,0	1/1:3,20:23:48.03:444,48,0	1/1:6,13:19:32.94:305,33,0	1/1:14,23:37:63.78:628,64,0	1/1:4,20:24:51.04:472,51,0	1/1:7,25:32:68.53:663,69,0	1/1:2,14:16:35.99:333,36,0	0/0:18,1:18:14.23:0,14,310	0/0:18,0:18:44.99:0,45,389	1/1:2,8:9:24.01:222,24,0	1/1:3,11:14:32.76:289,33,0	0/0:21,0:21:35.99:0,36,312	0/0:20,0:20:38.99:0,39,338	0/0:18,0:18:32.99:0,33,286	0/1:13,12:25:3.98:294,0,4	1/1:5,16:20:41.38:340,41,0	1/1:2,3:8:17.23:119,17,0	0/0:12,0:11:15:0,15,130	0/0:16,0:17:38.99:0,39,335	0/0:12,0:12:20.99:0,21,181	1/1:2,21:25:59.53:523,60,0	0/1:7,23:32:27.42:509,0,27	1/1:10,15:27:29.63:371,30,0	1/1:1,6:7:18.01:167,18,0
chr10	54746152	.	T	TTTG	6909.86	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-8.788;DP=578;FS=0.383;HRun=0;HaplotypeScore=125.2577;InbreedingCoeff=0.9824;MQ=70.28;MQ0=11;MQRankSum=-4.964;QD=37.15;ReadPosRankSum=7.360;VQSLOD=5.1552;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,28:32:75.12:1389,75,0	1/1:1,8:9:21.05:411,21,0	0/0:19,0:12:19.40:0,19,228	0/0:20,0:12:26.63:0,27,326	0/0:25,0:25:60.15:0,60,654	0/0:23,0:23:51.13:0,51,561	0/0:17,0:17:42.06:0,42,441	0/0:38,0:36:76.26:0,76,999	0/0:23,0:23:54.14:0,54,594	0/0:33,0:32:90.17:0,90,961	0/0:17,0:17:48.03:0,48,492	1/1:4,17:21:8.78:729,9,0	1/1:0,18:19:45.15:862,45,0	0/0:10,0:9:27.07:0,27,294	0/0:16,0:15:36.06:0,36,386	1/1:1,19:20:15.03:678,15,0	1/1:0,20:20:39.13:765,39,0	1/1:0,19:19:33.11:647,33,0	0/0:29,0:26:72.09:0,72,745	0/0:23,0:20:51.02:0,51,514	0/0:7,0:7:21.05:0,21,223	1/1:2,11:12:15.04:294,15,0	1/1:1,16:19:39.48:735,39,0	1/1:2,11:13:21.03:398,21,0	0/0:26,0:26:65.93:0,66,700	0/0:34,0:34:93.12:0,93,1017	0/0:25,0:24:71.93:0,72,706	0/0:7,0:7:21.05:0,21,227
chr10	54746342	.	TTTTTGG	T	2552.51	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=1.437;DP=553;FS=4.876;HRun=0;HaplotypeScore=127.2995;InbreedingCoeff=0.9732;MQ=56.11;MQ0=46;MQRankSum=-8.022;QD=15.85;ReadPosRankSum=-2.574;VQSLOD=2.6981;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:19:21.50:247,22,0	1/1:9,0:9:14.77:216,15,0	0/0:31,0:10:23.87:0,24,322	0/0:22,0:11:20.96:0,21,294	0/0:23,0:22:23.40:0,23,512	0/0:21,0:21:36.04:0,36,756	0/0:21,0:16:38.86:0,39,788	0/0:24,0:15:23.93:0,24,528	0/0:23,0:21:35.87:0,36,744	0/0:26,0:25:58.94:0,59,1116	0/0:18,0:17:39.13:0,39,832	1/1:13,1:12:28:320,28,0	1/1:18,0:18:14.99:167,15,0	0/0:17,0:16:30.10:0,30,636	0/0:17,0:17:17.87:0,18,365	1/1:16,0:15:18.53:225,19,0	1/1:28,0:26:56.83:588,57,0	1/1:17,1:16:32.93:370,33,0	0/0:18,0:17:43.62:0,44,776	0/0:22,0:21:54.72:0,55,1038	0/0:17,0:14:23.18:0,23,500	1/1:9,0:9:8.52:98,9,0	1/1:12,2:14:23.72:258,24,0	1/1:13,1:11:14.93:281,15,0	0/0:18,0:18:25.82:0,26,589	0/0:37,0:36:66.75:0,67,1622	0/0:20,0:18:36.06:0,36,755	0/0:16,0:13:12.58:0,13,353
chr10	54746343	.	TTTTGG	T	3906.52	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=-5.792;DP=546;FS=5.552;HRun=0;HaplotypeScore=116.2935;InbreedingCoeff=0.9182;MQ=57.49;MQ0=42;MQRankSum=-8.221;QD=20.67;ReadPosRankSum=-3.378;VQSLOD=2.4278;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,16:18:21.96:392,22,0	1/1:2,7:9:14.72:298,15,0	0/1:32,0:11:2.54:3,0,247	0/0:23,0:11:8.90:0,9,233	0/0:23,0:22:20.36:0,20,374	0/0:20,0:20:35.76:0,36,594	0/0:21,0:16:36.30:0,36,613	0/0:23,0:14:23.73:0,24,406	0/0:22,0:21:35.65:0,36,586	0/0:27,0:26:61.17:0,61,865	0/0:17,0:17:39.13:0,39,655	1/1:11,2:12:28.15:399,28,0	1/1:3,15:18:15.05:281,15,0	0/0:17,0:16:30.06:0,30,502	0/0:15,0:15:17.31:0,17,285	1/1:2,13:14:18:350,18,0	1/1:24,4:27:62.75:792,63,0	1/1:9,9:16:33.11:574,33,0	0/0:19,0:17:43.31:0,43,598	0/0:22,0:21:52.10:0,52,803	0/0:17,0:14:22.80:0,23,393	1/1:1,8:9:8.63:117,9,0	1/1:7,7:14:23.94:303,24,0	1/1:10,4:11:26.86:398,27,0	0/0:18,0:18:24.01:0,24,450	0/0:37,0:36:40.69:0,41,1233	0/0:20,0:18:36.03:0,36,591	0/0:16,0:13:12.47:0,12,277
chr10	54746344	.	TTTGG	T	3658.43	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=-2.871;DP=538;FS=8.085;HRun=0;HaplotypeScore=109.0910;InbreedingCoeff=0.8054;MQ=57.90;MQ0=42;MQRankSum=-7.149;QD=16.05;ReadPosRankSum=-4.917;VQSLOD=1.0501;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,1:19:21.96:309,22,0	1/1:9,0:9:14.79:227,15,0	0/1:32,0:11:2.34:2,0,208	0/0:22,1:11:8.65:0,9,196	0/0:22,0:21:14.62:0,15,252	0/0:19,0:19:32.07:0,32,435	0/1:23,0:18:0.31:0,0,415	0/0:22,0:13:23.27:0,23,296	0/0:21,0:20:35.48:0,35,428	0/0:24,0:23:54.71:0,55,603	0/0:17,0:17:37.32:0,37,478	1/1:13,0:12:28.23:381,28,0	1/1:17,1:18:15.05:239,15,0	0/0:18,0:17:29.58:0,30,372	0/0:15,0:15:5.70:0,6,191	1/1:14,0:13:17.79:267,18,0	1/1:25,3:27:63.08:852,63,0	1/1:15,1:14:33.11:493,33,0	0/0:19,0:17:39.54:0,40,416	0/0:22,0:21:48.26:0,48,563	0/0:17,0:14:23.24:0,23,296	1/1:9,0:9:8.76:117,9,0	1/1:12,2:14:23.95:368,24,0	1/1:13,1:11:29.89:397,30,0	0/1:18,0:18:6.32:6,0,276	0/0:35,0:34:35.51:0,36,888	0/0:20,0:18:35.58:0,36,430	0/0:16,0:13:12.03:0,12,200
chr10	54746929	.	A	ATTT	6674.99	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=8.681;DP=585;FS=1.552;HRun=10;HaplotypeScore=101.9575;InbreedingCoeff=0.9861;MQ=77.30;MQ0=0;MQRankSum=1.178;QD=18.59;ReadPosRankSum=-1.888;VQSLOD=2.9386;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:32:68.97:0,69,819	0/0:6,0:6:15.04:0,15,182	0/0:20,0:18:17.01:0,17,222	0/0:13,0:12:11.98:0,12,131	1/1:2,0:32:89.60:683,90,0	1/1:1,0:23:55.35:415,55,0	1/1:5,0:17:13.90:176,14,0	1/1:8,0:33:74.78:632,75,0	1/1:2,0:14:34.12:254,34,0	1/1:5,0:24:54.28:437,54,0	1/1:2,0:22:59.77:469,60,0	0/0:20,0:20:57.13:0,57,681	0/0:20,0:20:51.09:0,51,619	1/1:2,0:16:43.87:317,44,0	1/1:2,0:21:44.33:324,44,0	0/0:21,0:22:33.15:0,33,633	0/0:25,0:25:57.02:0,57,663	0/0:20,0:20:54.06:0,54,637	1/1:5,1:28:33.65:571,34,0	1/1:2,1:18:36.28:350,36,0	1/1:3,0:11:17.93:137,18,0	0/0:7,0:8:20.97:0,21,237	0/0:26,0:26:38.97:0,39,680	0/0:13,0:13:39.12:0,39,474	1/1:2,2:26:52.82:412,53,0	1/1:3,1:34:92.74:778,93,0	1/1:4,0:31:68.51:549,69,0	1/1:0,1:7:17.95:172,18,0
chr10	54747918	.	A	ATGTC	25598.80	PASS	AB=0.651;AC=51;AF=0.911;AN=56;BaseQRankSum=-3.907;DP=919;FS=2.629;HRun=0;HaplotypeScore=142.6102;InbreedingCoeff=0.7755;MQ=73.36;MQ0=5;MQRankSum=3.877;QD=30.26;ReadPosRankSum=4.371;VQSLOD=5.0346;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:54,0:52:93.32:1771,93,0	1/1:24,0:24:42.14:789,42,0	0/0:39,0:29:6.02:0,6,90	0/0:33,0:30:23.07:0,23,245	1/1:15,10:26:21.07:492,21,0	1/1:8,22:30:48.16:1142,48,0	1/1:10,14:28:27.09:642,27,0	1/1:42,0:40:18.02:300,18,0	1/1:14,23:39:45.15:1070,45,0	1/1:19,20:43:69.24:1501,69,0	1/1:6,11:18:21.07:494,21,0	1/1:31,0:31:57.20:1061,57,0	1/1:40,0:40:69.24:1300,69,0	0/1:13,15:28:2.21:925,0,2	1/1:10,24:34:62.96:1499,63,0	1/1:43,0:43:84.29:1565,84,0	1/1:36,0:36:54.19:1017,54,0	1/1:21,0:21:27.08:477,27,0	1/1:17,7:24:21.04:450,21,0	1/1:16,15:31:39.13:917,39,0	1/1:15,34:49:75.26:1785,75,0	1/1:37,0:35:54.19:1005,54,0	1/1:18,0:18:27.09:508,27,0	1/1:41,0:41:69.22:1272,69,0	1/1:11,16:29:45.15:1058,45,0	1/1:14,21:35:66.20:1422,66,0	1/1:13,10:22:12.04:282,12,0	1/1:5,16:21:36.12:857,36,0
chr10	54747932	.	G	GTCTA	23823.41	PASS	AB=1.000;AC=35;AF=0.625;AN=56;BaseQRankSum=-1.298;DP=921;FS=1.700;HRun=0;HaplotypeScore=146.5074;InbreedingCoeff=-0.1442;MQ=65.57;MQ0=7;MQRankSum=1.464;QD=29.05;ReadPosRankSum=19.973;VQSLOD=0.0897;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:3,53:54:93.32:2500,93,0	1/1:3,27:30:40.85:1148,41,0	0/0:37,0:25:65.45:0,65,637	0/0:35,0:30:52.40:0,52,679	0/1:27,0:27:99:262,0,249	0/1:28,0:28:78.76:682,0,79	0/1:25,0:25:99:380,0,104	0/0:28,0:26:49.19:0,49,534	0/1:44,0:44:99:617,0,357	0/1:49,0:49:99:787,0,425	0/1:21,0:20:99:292,0,143	1/1:0,28:29:57.20:1535,57,0	1/1:2,36:39:69.24:1856,69,0	0/1:26,0:26:99:569,0,183	0/1:36,0:36:99:893,0,172	1/1:4,42:47:84.29:2261,84,0	1/1:3,32:36:57.19:1491,57,0	1/1:3,19:22:15.09:745,15,0	0/1:23,0:22:99:218,0,214	0/1:33,0:32:99:533,0,239	0/1:49,0:49:99:1057,0,183	1/1:3,34:38:54.19:1445,54,0	1/1:1,18:19:26.78:726,27,0	1/1:4,38:42:66.70:1777,67,0	0/1:23,0:23:20.81:639,0,21	0/1:35,0:35:99:731,0,239	0/1:20,0:20:99:161,0,106	0/1:21,0:21:48.83:517,0,49
chr10	54749357	.	A	ATGTGTGTG	5397.44	PASS	AB=0.792;AC=26;AF=0.542;AN=48;BaseQRankSum=1.740;DP=436;FS=6.560;HRun=0;HaplotypeScore=189.5190;InbreedingCoeff=0.5640;MQ=56.89;MQ0=8;MQRankSum=-4.721;QD=20.60;ReadPosRankSum=0.702;VQSLOD=3.7226;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:17,0:23:26.19:88,0,26	1/1:6,0:9:8.97:292,9,0	0/0:19,0:11:8.37:0,8,218	0/1:25,0:11:18.62:19,0,159	0/0:9,7:16:0.47:0,0,1	0/0:6,9:15:0.47:0,0,1	1/1:7,5:14:2.96:125,3,0	1/1:10,3:15:24.03:620,24,0	0/1:5,8:13:0:0,0,0	1/1:15,4:18:32.32:993,32,0	./.	1/1:13,0:19:8.55:276,9,0	1/1:15,0:23:26.86:844,27,0	./.	./.	1/1:16,0:21:9.03:258,9,0	1/1:14,0:22:15.05:523,15,0	1/1:11,0:16:18.06:630,18,0	0/0:11,0:11:21.06:0,21,493	0/0:18,0:18:20.94:0,21,512	0/0:11,0:10:12.04:0,12,311	0/1:17,0:25:6.82:180,0,7	0/0:15,0:21:8.61:0,9,56	0/0:9,0:15:17.81:0,18,144	./.	1/1:12,0:12:12.02:295,12,0	0/0:13,0:13:30.10:0,30,744	1/1:4,0:4:6.02:254,6,0
chr10	54749422	.	ATG	A	42.98	PASS	AB=0.908;AC=7;AF=0.350;AN=20;BaseQRankSum=-1.110;DP=109;FS=1.903;HRun=0;HaplotypeScore=56.9772;InbreedingCoeff=-0.0020;MQ=43.67;MQ0=1;MQRankSum=-0.892;QD=0.96;ReadPosRankSum=-1.806;VQSLOD=1.1373;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	0/0:9,0:3:3.01:0,3,47	./.	./.	./.	1/1:9,0:6:8.90:59,9,0	0/1:2,2:4:0:0,0,0	0/1:9,0:9:27:27,0,138	./.	./.	./.	./.	./.	./.	0/0:1,0:1:2.68:0,3,11	./.	./.	0/1:8,0:8:0:0,0,0	./.	./.	./.	./.	0/0:9,1:10:0:0,0,0	0/1:6,1:7:25.09:25,0,71	0/1:8,0:8:15.23:15,0,29	0/0:8,0:8:6.44:0,6,104
chr10	54749431	.	TAC	T	202.14	PASS	AB=0.891;AC=6;AF=0.333;AN=18;BaseQRankSum=-2.332;DP=101;FS=7.960;HRun=0;HaplotypeScore=51.3881;MQ=37.50;MQ0=0;MQRankSum=-0.563;QD=5.18;ReadPosRankSum=-0.209;VQSLOD=1.0694;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	./.	./.	./.	0/1:10,7:17:55.45:199,0,55	0/0:5,0:5:2.37:0,2,8	0/1:8,0:8:11.16:11,0,244	./.	./.	./.	./.	./.	./.	0/0:0,0:1:1.82:0,2,5	./.	1/1:1,0:1:2.98:21,3,0	./.	./.	./.	./.	./.	0/0:9,0:9:0:0,0,0	0/1:7,0:7:21.12:21,0,171	0/1:5,1:6:32.49:34,0,32	0/0:8,0:8:20.95:0,21,170
chr10	54749441	.	T	TAC	634.36	PASS	AB=0.850;AC=6;AF=0.300;AN=20;BaseQRankSum=4.419;DP=89;FS=1.492;HRun=0;HaplotypeScore=41.4050;InbreedingCoeff=0.2875;MQ=38.67;MQ0=0;MQRankSum=-0.694;QD=23.49;ReadPosRankSum=0.889;VQSLOD=3.6381;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	0/0:1,0:1:0.47:0,0,1	./.	./.	./.	0/0:22,1:22:50.35:0,50,707	0/0:1,3:4:2.22:0,2,7	1/1:5,2:6:10.28:167,10,0	./.	./.	./.	./.	./.	./.	0/0:1,0:1:0.47:0,0,1	./.	0/0:1,0:1:2.98:0,3,21	./.	./.	./.	./.	./.	0/0:3,4:7:0:0,0,0	0/1:4,3:7:68.93:200,0,69	0/1:5,0:5:8.28:11,0,8	1/1:1,7:8:21.07:346,21,0
chr10	54749447	.	T	TAC	147.07	PASS	AB=1.000;AC=6;AF=0.273;AN=22;BaseQRankSum=4.238;DP=84;FS=1.481;HRun=0;HaplotypeScore=37.0659;InbreedingCoeff=0.2446;MQ=47.97;MQ0=0;MQRankSum=0.124;QD=6.68;ReadPosRankSum=-0.594;VQSLOD=2.7529;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:1,0:1:0:0,0,0	0/0:1,0:1:0.47:0,0,1	./.	./.	./.	0/0:23,1:23:8.52:0,9,737	0/0:4,0:4:2.22:0,2,7	1/1:5,1:5:11.68:75,12,0	./.	./.	./.	./.	./.	./.	0/0:1,0:1:2.68:0,3,11	./.	0/0:1,0:1:2.98:0,3,21	./.	./.	./.	./.	./.	0/0:5,2:7:0:0,0,0	0/1:6,0:6:63.15:63,0,73	0/1:4,0:4:10.62:11,0,17	1/1:6,0:6:12.90:89,13,0
chr10	54749453	.	T	TAC	300.57	PASS	AB=0.981;AC=6;AF=0.250;AN=24;BaseQRankSum=3.156;DP=86;FS=6.202;HRun=0;HaplotypeScore=39.9315;InbreedingCoeff=0.2331;MQ=47.71;MQ0=0;MQRankSum=0.047;QD=7.16;ReadPosRankSum=-1.052;VQSLOD=1.6353;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:2,0:2:3:0,3,34	0/0:2,0:1:0.47:0,0,1	0/0:5,0:5:0:0,0,0	./.	./.	0/1:25,1:25:13.91:14,0,680	0/0:3,0:3:2.22:0,2,7	1/1:5,0:4:8.98:96,9,0	./.	./.	./.	./.	./.	./.	./.	./.	0/0:1,0:1:2.22:0,2,7	./.	0/0:6,0:5:0:0,0,0	./.	./.	./.	0/0:7,0:7:0:0,0,0	0/1:5,0:5:51.42:95,0,51	0/0:4,0:4:8.85:0,9,63	1/1:6,0:6:12.04:186,12,0
chr10	54749474	.	A	ACG	394.62	PASS	AC=8;AF=0.211;AN=38;BaseQRankSum=1.809;DP=163;FS=7.688;HRun=0;HaplotypeScore=58.2272;InbreedingCoeff=0.4519;MQ=55.53;MQ0=0;MQRankSum=-1.219;QD=10.12;ReadPosRankSum=-0.244;VQSLOD=2.0303;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:4,10:14:0.47:0,0,1	./.	0/0:6,0:5:8.86:0,9,66	0/0:7,0:2:3.46:0,3,25	0/0:2,0:2:6.02:0,6,90	./.	0/0:3,0:3:3.01:0,3,44	0/0:20,0:19:44.66:0,45,450	0/0:3,0:3:2.22:0,2,7	0/0:3,0:2:6.02:0,6,96	0/0:2,0:2:3.01:0,3,46	1/1:6,8:14:6.02:88,6,0	./.	./.	0/0:3,0:3:3.01:0,3,46	1/1:1,9:10:6.02:106,6,0	1/1:3,5:8:8.99:109,9,0	1/1:1,6:7:12.04:209,12,0	0/0:1,0:1:3.01:0,3,47	0/0:1,0:1:3.01:0,3,46	./.	./.	./.	./.	0/0:4,0:4:6.02:0,6,92	0/0:2,0:2:2.88:0,3,15	./.	0/0:7,0:7:1.80:0,2,7
chr10	54750787	.	TGCTCCTGGCCTCAGGGC	T	1665.44	PASS	AB=0.974;AC=13;AF=0.232;AN=56;BaseQRankSum=6.726;DP=594;FS=2.609;HRun=0;HaplotypeScore=298.4961;InbreedingCoeff=-0.2212;MQ=47.19;MQ0=20;MQRankSum=-5.851;QD=5.12;ReadPosRankSum=-3.101;VQSLOD=1.8699;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:22:99:147,0,288	0/0:5,0:4:5.98:0,6,68	0/0:9,0:2:3.90:0,4,61	0/1:17,0:9:47.33:47,0,69	0/0:15,0:15:39.13:0,39,1514	0/0:10,0:10:29.88:0,30,1141	0/0:40,0:40:99:0,102,4195	0/0:15,0:15:36.12:0,36,924	0/0:27,0:27:60.21:0,60,2496	0/0:27,0:24:60.20:0,60,2173	0/0:11,0:10:27.09:0,27,972	0/1:44,0:42:99:160,0,1125	0/1:24,0:21:99:269,0,260	0/0:24,0:24:57.20:0,57,2492	0/0:10,0:10:30.10:0,30,1650	0/1:19,0:17:99:121,0,435	0/1:24,0:23:99:237,0,408	0/1:24,0:23:99:139,0,323	0/1:12,8:13:47.14:199,0,47	1/1:10,0:9:1.15:2,1,0	0/1:78,0:74:99:355,0,457	0/0:16,0:13:8.57:0,9,81	0/0:7,0:6:3:0,3,74	0/1:30,0:27:23.74:24,0,144	0/0:21,0:20:36.12:0,36,1328	0/0:21,0:21:46.40:0,46,2117	0/1:9,0:9:37.06:111,0,37	0/0:11,0:11:24.08:0,24,807
chr10	54751042	.	G	GA	5191.50	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=0.446;DP=574;FS=0.357;HRun=6;HaplotypeScore=64.5216;InbreedingCoeff=0.9904;MQ=77.40;MQ0=1;MQRankSum=-9.492;QD=29.00;ReadPosRankSum=2.691;VQSLOD=5.5293;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,17:20:49.02:618,49,0	1/1:1,4:5:9.03:113,9,0	0/0:24,0:24:57.55:0,58,559	0/0:14,0:14:24.05:0,24,243	0/0:26,0:26:66.15:0,66,673	0/0:19,0:19:54.12:0,54,551	0/0:17,0:17:48.11:0,48,490	0/0:27,0:27:72.09:0,72,705	0/0:20,0:20:57.12:0,57,574	0/0:25,0:25:66.15:0,66,673	0/0:13,0:13:36.08:0,36,366	1/1:5,22:27:66.21:830,66,0	1/1:0,24:24:69.13:826,69,0	0/0:21,0:21:60.14:0,60,612	0/0:29,0:29:81.17:0,81,819	1/1:5,13:18:39.02:452,39,0	1/1:2,9:11:24.08:302,24,0	1/1:4,20:23:54.17:678,54,0	0/0:24,0:24:69.09:0,69,684	0/0:20,0:20:60.14:0,60,612	0/0:31,0:30:90.19:0,90,911	1/1:0,16:16:39.12:490,39,0	1/1:3,9:11:30.09:365,30,0	1/1:5,17:22:43.68:517,44,0	0/0:19,0:19:54.12:0,54,550	0/0:25,0:25:72.16:0,72,735	0/0:29,0:29:87.20:0,87,887	0/0:12,0:12:26.97:0,27,252
chr10	54751109	.	T	TG	4984.78	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=9.246;DP=560;FS=47.002;HRun=0;HaplotypeScore=68.7180;InbreedingCoeff=0.9820;MQ=87.40;MQ0=0;MQRankSum=-16.005;QD=30.40;ReadPosRankSum=1.320;VQSLOD=1.9825;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,23:24:60:864,60,0	1/1:0,19:18:47.99:657,48,0	0/0:36,0:36:99:0,105,1385	0/0:11,0:11:33.07:0,33,424	0/0:20,0:20:60.20:0,60,837	0/0:20,0:20:57.18:0,57,779	0/0:17,0:17:48.12:0,48,634	0/0:29,0:29:87.28:0,87,1201	0/0:24,0:24:72.24:0,72,1007	0/0:26,0:26:75.24:0,75,1032	0/0:11,0:11:33.10:0,33,444	1/1:2,26:28:80.41:1037,80,0	1/1:2,16:18:50.64:532,51,0	0/0:29,0:29:87.25:0,87,1178	0/0:25,0:25:72.18:0,72,950	1/1:0,17:18:45.15:704,45,0	1/1:2,9:11:21:304,21,0	1/1:4,3:8:15.03:206,15,0	0/0:22,0:22:60.20:0,60,836	0/0:17,0:16:45.15:0,45,628	0/0:24,0:24:72.15:0,72,962	1/1:3,8:11:26.89:315,27,0	1/1:2,15:17:29.80:312,30,0	1/1:2,8:10:6.40:54,6,0	0/0:23,0:23:69.19:0,69,942	0/0:27,0:27:72.22:0,72,973	0/0:23,0:23:69.23:0,69,965	0/0:12,0:12:30.10:0,30,418
chr10	54751374	.	A	ATT	28789.46	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-7.236;DP=614;FS=8.155;HRun=1;HaplotypeScore=61.3506;InbreedingCoeff=0.9986;MQ=82.69;MQ0=0;MQRankSum=-9.772;QD=49.90;ReadPosRankSum=5.068;VQSLOD=4.2403;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,32:34:93.23:1698,93,0	1/1:1,16:17:45.15:859,45,0	0/0:19,0:19:52.42:0,52,784	0/0:18,0:18:48.12:0,48,655	1/1:1,23:24:69.19:1295,69,0	1/1:0,26:26:63.22:1217,63,0	1/1:1,13:15:33.11:635,33,0	1/1:5,21:27:72.21:1247,72,0	1/1:0,11:11:24.08:464,24,0	1/1:0,26:27:81.23:1483,81,0	1/1:0,17:17:48.12:870,48,0	1/1:0,25:25:69.24:1332,69,0	1/1:1,17:19:45.15:869,45,0	1/1:2,16:18:51.09:909,51,0	1/1:2,24:25:69.18:1271,69,0	1/1:3,19:23:54.19:1033,54,0	1/1:0,34:34:90.31:1738,90,0	1/1:2,15:17:45.15:865,45,0	1/1:1,17:18:54.15:988,54,0	1/1:0,24:26:75.17:1353,75,0	1/1:0,15:15:36.12:696,36,0	1/1:1,19:20:51.17:984,51,0	1/1:0,21:21:60.21:1149,60,0	1/1:1,19:21:54.06:928,54,0	1/1:0,35:36:87.30:1681,87,0	1/1:1,30:31:90.31:1720,90,0	1/1:0,15:15:42.14:810,42,0	1/1:0,12:12:36.12:695,36,0
chr10	54751492	.	TTGTG	T	1083.67	PASS	AB=0.888;AC=20;AF=0.385;AN=52;BaseQRankSum=6.701;DP=625;FS=0.000;HRun=0;HaplotypeScore=138.8736;InbreedingCoeff=0.3505;MQ=68.03;MQ0=11;MQRankSum=-2.012;QD=3.76;ReadPosRankSum=1.568;VQSLOD=2.5512;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:36,3:40:11.11:117,11,0	1/1:7,1:12:2.76:18,3,0	./.	./.	0/0:21,0:21:6.02:0,6,99	0/0:23,0:23:9:0,9,153	0/0:24,0:23:15.04:0,15,272	0/0:30,0:30:0.94:0,1,2	0/0:17,0:17:21.03:0,21,252	0/0:21,0:21:24.07:0,24,458	0/0:14,0:14:6.49:0,6,106	1/1:12,7:19:1.61:85,2,0	0/1:24,3:26:7.48:196,0,7	0/1:11,0:11:5.85:6,0,135	0/0:20,0:20:15.02:0,15,263	0/1:17,0:27:26.07:26,0,29	1/1:18,5:23:24.07:324,24,0	0/1:33,2:36:38.44:204,0,38	0/0:16,0:16:3.01:0,3,31	0/1:9,0:11:0:0,0,0	0/0:37,0:37:6:0,6,67	1/1:12,5:17:2.96:20,3,0	1/1:13,1:14:5.81:57,6,0	1/1:24,8:31:11.70:129,12,0	0/0:17,0:17:9.03:0,9,151	0/0:17,0:16:8.44:0,8,90	0/1:15,1:14:7.31:62,0,7	0/0:11,0:10:6.02:0,6,93
chr10	54752363	.	CA	C	8993.58	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=14.069;DP=676;FS=0.606;HRun=2;HaplotypeScore=70.4468;InbreedingCoeff=0.9998;MQ=99.83;MQ0=0;MQRankSum=-3.987;QD=35.69;ReadPosRankSum=3.848;VQSLOD=5.3319;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,46:46:99:1597,123,0	1/1:0,13:13:30.10:386,30,0	0/0:40,0:40:88.15:0,88,1463	0/0:33,0:33:83.49:0,83,1176	0/0:20,0:20:60.20:0,60,892	0/0:15,0:15:45.15:0,45,674	0/0:19,0:19:54.17:0,54,778	0/0:35,0:35:99:0,105,1558	0/0:17,0:17:51.17:0,51,764	0/0:24,0:24:69.23:0,69,1018	0/0:14,0:14:42.14:0,42,625	1/1:0,25:25:75.24:974,75,0	1/1:0,20:20:57.19:740,57,0	0/0:26,0:26:78.24:0,78,1129	0/0:29,0:29:87.29:0,87,1304	1/1:1,21:22:63.20:818,63,0	1/1:1,29:30:84.27:1091,84,0	1/1:0,33:33:87.28:1130,87,0	0/0:16,0:16:47.50:0,48,656	0/0:21,0:21:60.18:0,60,861	0/0:32,0:32:96.28:0,96,1410	1/1:0,17:17:48.16:623,48,0	1/1:1,10:11:30.10:389,30,0	1/1:0,35:35:96.31:1247,96,0	0/0:24,0:24:72.24:0,72,1079	0/0:19,0:19:57.18:0,57,835	0/0:26,0:26:78.26:0,78,1169	0/0:14,0:14:42.14:0,42,630
chr10	54754950	.	TC	T	589.34	PASS	AC=30;AF=0.882;AN=34;BaseQRankSum=-1.445;DP=71;FS=8.439;HRun=2;HaplotypeScore=11.1384;InbreedingCoeff=0.2841;MQ=111.37;MQ0=11;MQRankSum=-2.730;QD=15.93;ReadPosRankSum=-2.042;VQSLOD=1.8936;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,4:4:3.01:37,3,0	./.	0/0:12,0:8:14.59:0,15,187	0/0:10,0:6:15.05:0,15,211	1/1:1,1:1:3.01:38,3,0	./.	1/1:1,3:3:3.01:38,3,0	1/1:2,0:1:3.01:39,3,0	1/1:2,0:2:3.01:39,3,0	1/1:1,1:1:3.01:38,3,0	1/1:2,0:2:6.01:64,6,0	./.	1/1:0,2:2:3.01:37,3,0	./.	1/1:0,3:3:6.02:76,6,0	./.	1/1:1,2:2:6.02:77,6,0	./.	1/1:1,0:1:3.01:37,3,0	./.	1/1:2,0:2:3:25,3,0	./.	./.	1/1:3,0:2:3.01:39,3,0	1/1:1,2:3:3.01:38,3,0	./.	1/1:0,2:2:6.02:76,6,0	./.
chr10	54755517	.	TC	T	8719.12	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=15.484;DP=807;FS=6.178;HRun=4;HaplotypeScore=80.0070;InbreedingCoeff=0.9996;MQ=92.00;MQ0=0;MQRankSum=-9.713;QD=31.25;ReadPosRankSum=5.601;VQSLOD=5.0873;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,59:62:99:1944,162,0	0/0:16,0:16:45.15:0,45,630	0/0:33,0:32:87.26:0,87,1173	0/0:34,0:34:96.32:0,96,1321	0/0:19,0:19:57.19:0,57,797	0/0:29,0:29:87.26:0,87,1195	0/0:35,0:35:96.32:0,96,1343	0/0:25,0:25:69.23:0,69,965	0/0:44,0:44:99:0,129,1774	0/0:35,0:35:99:0,99,1371	0/0:10,0:10:24.08:0,24,335	1/1:0,34:34:87.19:1044,87,0	1/1:1,43:44:99:1403,117,0	0/0:30,0:30:87.28:0,87,1197	0/0:31,0:30:90.29:0,90,1243	0/0:33,0:33:96.30:0,96,1312	1/1:1,28:29:75.20:900,75,0	1/1:1,26:27:78.15:915,78,0	0/0:26,0:26:69.23:0,69,965	0/0:20,0:20:57.18:0,57,781	0/0:29,0:29:81.23:0,81,1111	1/1:1,27:28:72.22:861,72,0	1/1:1,14:15:38.87:464,39,0	1/1:2,38:40:99:1188,99,0	0/0:18,0:18:48.16:0,48,672	0/0:27,0:27:78.22:0,78,1059	0/0:22,0:22:63.21:0,63,877	0/0:12,0:12:36.12:0,36,504
chr10	54755888	.	AC	A	4275.68	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=10.820;DP=718;FS=0.000;HRun=5;HaplotypeScore=71.3065;InbreedingCoeff=0.9978;MQ=84.19;MQ0=1;MQRankSum=-2.163;QD=30.98;ReadPosRankSum=-0.574;VQSLOD=5.0494;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,141,1891	0/0:10,0:10:30.10:0,30,410	0/0:25,0:25:72.05:0,72,877	0/0:21,0:21:57.13:0,57,702	0/0:14,0:14:36.12:0,36,492	0/0:19,0:19:57.19:0,57,773	0/0:40,0:40:99:0,105,1421	0/0:19,0:19:51.17:0,51,698	0/0:31,0:31:87.28:0,87,1176	0/0:32,0:32:81.27:0,81,1104	0/0:9,0:9:24.07:0,24,313	0/0:24,0:24:66.22:0,66,902	0/0:25,0:25:72.23:0,72,966	0/0:31,0:31:93.28:0,93,1226	0/0:37,0:37:99:0,105,1393	0/0:30,0:30:81.26:0,81,1094	0/0:34,0:34:99:0,102,1376	0/0:29,0:29:81.26:0,81,1091	1/1:4,29:33:84.06:942,84,0	1/1:1,16:17:48.14:544,48,0	1/1:2,56:58:99:1769,156,0	0/0:10,0:10:30.09:0,30,394	0/0:12,0:12:30.10:0,30,410	0/0:27,0:26:72.24:0,72,982	0/0:15,0:15:42.13:0,42,560	0/0:27,0:27:75.25:0,75,1022	1/1:0,30:30:90.26:1021,90,0	0/0:10,0:10:21.07:0,21,286
chr10	54756350	.	GA	G	11954.40	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=20.507;DP=705;FS=0.278;HRun=2;HaplotypeScore=93.2768;InbreedingCoeff=0.9956;MQ=94.27;MQ0=0;MQRankSum=-3.622;QD=35.79;ReadPosRankSum=5.134;VQSLOD=4.9299;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,33:33:93.30:1207,93,0	1/1:0,4:4:12.04:156,12,0	0/0:31,0:31:90.30:0,90,1338	0/0:32,0:32:90.30:0,90,1344	0/0:25,0:25:72.24:0,72,1079	0/0:23,0:23:69.23:0,69,1034	0/0:12,0:12:36.10:0,36,503	0/0:38,0:38:99:0,114,1688	0/0:28,0:28:81.24:0,81,1187	0/0:27,0:27:81.27:0,81,1214	0/0:20,0:20:57.17:0,57,835	1/1:0,35:35:96.31:1245,96,0	1/1:0,34:34:96.31:1246,96,0	0/0:21,0:21:63.19:0,63,906	0/0:33,0:33:99:0,99,1478	1/1:0,29:29:81.26:1052,81,0	1/1:0,22:22:66.21:857,66,0	1/1:0,17:17:48.16:623,48,0	1/1:0,9:9:27.09:351,27,0	1/1:1,28:29:78.25:1012,78,0	1/1:1,29:30:75.24:974,75,0	1/1:0,26:26:63.20:818,63,0	1/1:0,20:20:56.97:740,57,0	1/1:0,15:15:45.15:584,45,0	0/0:26,0:26:78.24:0,78,1142	0/0:36,1:37:69.38:0,69,1492	1/1:0,31:31:84.27:1090,84,0	0/0:18,0:18:54.18:0,54,809
chr10	54758601	.	T	TCA	3013.59	PASS	AB=0.803;AC=31;AF=0.574;AN=54;BaseQRankSum=-6.229;DP=445;FS=0.622;HRun=0;HaplotypeScore=82.7219;InbreedingCoeff=0.4337;MQ=64.99;MQ0=10;MQRankSum=-0.228;QD=9.72;ReadPosRankSum=-0.111;VQSLOD=2.8218;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:16,0:21:0.66:1,0,72	1/1:5,0:5:3:25,3,0	./.	0/1:26,0:17:0:0,0,0	0/1:10,7:17:7.48:166,0,7	0/1:16,3:18:45.39:169,0,45	0/1:7,9:17:6.19:316,0,6	1/1:19,0:19:11.80:115,12,0	1/1:4,7:10:18.06:272,18,0	1/1:20,2:22:18.01:236,18,0	0/1:11,4:14:48.32:124,0,48	0/0:2,0:11:19.89:0,20,98	0/0:7,0:15:17.04:0,17,84	1/1:4,11:15:18.06:272,18,0	0/1:5,7:12:15.21:208,0,15	1/1:8,0:8:5.99:50,6,0	0/0:13,0:25:14.30:0,14,115	0/0:14,0:28:25.47:0,25,126	1/1:19,0:23:23.13:168,23,0	0/0:8,0:8:0.89:0,1,2	1/1:14,1:17:6.89:56,7,0	0/0:5,0:10:8.64:0,9,47	0/0:4,0:4:3:0,3,27	0/0:6,0:15:22.63:0,23,110	1/1:2,3:5:6.02:91,6,0	1/1:10,18:28:25.73:595,26,0	1/1:12,0:12:15.88:146,16,0	1/1:9,6:14:12.04:181,12,0
chr10	54758626	.	C	CACACACACACAT	980.49	PASS	AB=1.000;AC=7;AF=0.130;AN=54;BaseQRankSum=0.378;DP=510;FS=9.208;HRun=0;HaplotypeScore=177.4773;InbreedingCoeff=0.3209;MQ=58.33;MQ0=15;MQRankSum=-3.155;QD=10.66;ReadPosRankSum=-0.697;VQSLOD=1.2846;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:41.85:0,42,636	1/1:1,7:8:3.01:179,3,0	0/0:27,0:14:14.52:0,15,136	0/0:28,0:13:17.06:0,17,176	0/0:17,0:17:27.01:0,27,317	0/0:18,0:17:23.50:0,24,382	0/0:22,0:22:50.58:0,51,656	0/0:28,0:28:53.78:0,54,521	0/0:11,0:10:24.04:0,24,342	0/0:22,0:22:27:0,27,295	0/0:12,0:11:21.48:0,21,371	0/0:14,0:14:33.04:0,33,712	0/0:14,0:14:30.03:0,30,624	0/0:18,0:18:39.01:0,39,460	0/0:18,0:18:36.03:0,36,501	1/1:2,13:17:6.49:301,6,0	0/0:26,0:26:31.17:0,31,962	0/0:34,0:32:57.83:0,58,980	0/1:18,0:18:99:372,0,137	./.	0/1:31,0:28:99:133,0,273	0/0:6,0:6:8.98:0,9,195	0/0:3,0:3:5.99:0,6,51	0/0:17,0:17:39.04:0,39,773	0/0:6,0:6:8.27:0,8,122	0/0:29,0:29:38.05:0,38,627	0/1:18,0:18:99:120,0,137	0/0:14,0:13:5.83:0,6,236
chr10	54760814	.	GGTGTGTGTGTGTGT	G	1973.30	PASS	AB=0.912;AC=18;AF=0.333;AN=54;BaseQRankSum=1.426;DP=543;FS=0.755;HRun=0;HaplotypeScore=202.3344;InbreedingCoeff=0.6542;MQ=67.09;MQ0=15;MQRankSum=-1.020;QD=11.21;ReadPosRankSum=-2.084;VQSLOD=2.4844;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:27:23.76:0,24,646	0/0:2,0:6:11.87:0,12,118	0/0:25,0:21:3.01:0,3,35	0/0:35,0:24:11.99:0,12,114	0/1:11,2:14:3.80:7,0,4	1/1:6,9:15:6.02:179,6,0	1/1:13,0:15:1.42:51,1,0	1/1:23,0:23:9:96,9,0	0/1:18,0:17:35.91:135,0,36	1/1:10,9:18:21.50:374,22,0	1/1:6,0:8:2.80:25,3,0	0/0:13,0:11:2.70:0,3,70	0/0:9,0:9:21.07:0,21,595	1/1:11,11:21:12.04:470,12,0	./.	0/0:11,0:17:8.07:0,8,127	0/0:32,0:33:49.51:0,50,1608	0/0:22,0:23:51.11:0,51,1838	0/0:27,0:25:31.10:0,31,843	0/0:18,0:22:14.97:0,15,372	0/0:39,0:40:45.09:0,45,1005	0/0:9,0:13:11.30:0,11,398	0/0:15,0:16:24.07:0,24,772	0/0:19,0:19:27.09:0,27,1209	1/1:9,7:17:15.05:404,15,0	1/1:14,9:22:21.04:411,21,0	0/0:13,0:13:21.05:0,21,612	0/0:4,0:4:3.01:0,3,49
chr10	54760843	.	G	GTGTGTGTG	2377.86	PASS	AB=1.000;AC=25;AF=0.521;AN=48;BaseQRankSum=-4.596;DP=526;FS=9.522;HRun=0;HaplotypeScore=151.6291;InbreedingCoeff=0.4047;MQ=45.93;MQ0=38;MQRankSum=2.556;QD=7.23;ReadPosRankSum=-2.026;VQSLOD=1.6631;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:35,0:32:18:258,18,0	0/1:5,0:5:18.80:19,0,47	./.	./.	0/0:14,0:13:0.47:0,0,1	0/0:15,0:15:3.01:0,3,56	1/1:15,0:14:1.30:3,1,0	0/1:25,0:19:0:0,0,0	0/0:16,0:14:3.01:0,3,56	0/0:20,0:17:5.98:0,6,66	0/1:10,0:10:0.13:0,0,0	./.	1/1:9,0:9:15.03:191,15,0	0/0:18,0:17:11.71:0,12,223	./.	0/0:15,0:14:6.02:0,6,112	1/1:29,0:29:27.98:393,28,0	1/1:32,0:29:36.67:607,37,0	0/1:25,0:20:16.47:16,0,108	0/0:22,0:20:2.97:0,3,21	1/1:49,0:45:8.41:79,8,0	1/1:18,0:17:8.58:191,9,0	1/1:18,0:18:15.05:290,15,0	1/1:24,0:23:19.99:403,20,0	0/0:20,0:19:1.07:0,1,133	0/0:16,0:13:6.02:0,6,88	0/1:23,0:21:39.07:72,0,39	1/1:12,0:11:1.25:3,1,0
chr10	54760847	.	GTGTGTGTGTGTGTC	G	1728.43	PASS	AB=1.000;AC=17;AF=0.315;AN=54;BaseQRankSum=1.097;DP=515;FS=9.680;HRun=0;HaplotypeScore=189.0870;InbreedingCoeff=-0.2985;MQ=46.21;MQ0=39;MQRankSum=1.245;QD=5.80;ReadPosRankSum=-2.169;VQSLOD=1.6146;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:37,0:35:99:200,0,402	0/1:5,0:5:0.88:1,0,50	./.	0/0:9,0:4:5.83:0,6,33	0/1:14,0:13:6.83:7,0,95	0/1:16,0:16:58.94:123,0,59	0/1:17,0:16:18.25:18,0,92	0/1:24,0:18:2.51:3,0,140	1/1:8,8:14:5.70:181,6,0	0/1:20,0:17:99:225,0,99	0/1:9,0:9:30.87:31,0,34	0/1:12,0:10:37.19:37,0,58	0/0:10,0:10:2.04:0,2,427	0/1:17,0:16:9.28:386,0,9	0/0:14,0:11:17.97:0,18,148	0/0:13,0:12:7.18:0,7,213	0/0:29,0:29:34.75:0,35,1469	0/1:33,0:31:34.43:34,0,1648	0/0:22,0:17:36.06:0,36,871	0/0:22,0:20:24.08:0,24,490	0/0:47,0:43:64.89:0,65,1231	0/1:18,0:17:96.91:97,0,280	0/0:15,0:15:9.55:0,10,562	0/1:22,0:21:25.15:25,0,1157	0/1:20,0:19:99:273,0,168	0/1:17,0:14:99:235,0,102	0/0:21,0:19:18.05:0,18,485	0/0:11,0:10:12.73:0,13,217
chr10	54760857	.	G	GTCTGTC	1354.89	PASS	AB=0.966;AC=12;AF=0.222;AN=54;BaseQRankSum=2.654;DP=536;FS=8.050;HRun=0;HaplotypeScore=157.2118;InbreedingCoeff=-0.1501;MQ=48.21;MQ0=36;MQRankSum=-2.663;QD=5.81;ReadPosRankSum=1.853;VQSLOD=2.1634;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:32:52.98:0,53,738	1/1:7,0:7:4.75:91,5,0	./.	0/0:8,0:6:10.64:0,11,169	0/0:17,0:16:27.53:0,28,361	0/0:18,0:18:20.25:0,20,244	0/0:19,0:18:3.72:0,4,294	0/0:24,0:19:20.91:0,21,307	0/1:13,0:11:9.74:10,0,61	0/0:24,0:22:16.58:0,17,637	0/0:11,0:11:20.94:0,21,288	0/0:14,0:12:9.50:0,10,147	0/0:10,0:10:9.84:0,10,215	0/0:21,0:20:27.05:0,27,392	0/0:17,0:14:27.08:0,27,406	0/0:14,0:13:2.56:0,3,59	0/1:29,0:29:36.90:37,0,415	0/0:31,0:28:15.70:0,16,612	0/1:28,0:23:99:317,0,105	0/1:23,0:21:37.75:261,0,38	0/1:41,0:38:26.22:620,0,26	0/1:16,0:15:19.57:20,0,255	0/1:13,0:13:18.60:19,0,179	0/1:23,0:21:21.62:22,0,371	0/0:24,0:23:22.30:0,22,710	0/1:19,0:16:23.93:24,0,294	0/1:10,8:19:79.24:82,0,79	0/0:11,0:10:29.13:0,29,416
chr10	54760991	.	CT	C	1112.77	PASS	AB=0.760;AC=23;AF=0.411;AN=56;BaseQRankSum=4.865;DP=547;FS=4.429;HRun=17;HaplotypeScore=67.3298;InbreedingCoeff=0.2489;MQ=69.46;MQ0=3;MQRankSum=0.835;QD=3.72;ReadPosRankSum=6.189;VQSLOD=0.2140;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:14,13:31:69.03:96,0,69	1/1:3,8:11:14.44:83,14,0	0/1:25,1:12:27.47:27,0,29	0/0:24,0:10:5.93:0,6,40	0/0:22,1:23:18.83:0,19,220	0/0:13,2:17:17.58:0,18,204	0/0:15,1:16:8.52:0,9,149	0/0:35,1:38:22.64:0,23,343	0/1:13,4:18:14.31:14,0,149	0/0:13,0:13:7.16:0,7,144	0/0:13,1:15:4.69:0,5,110	0/1:8,5:13:20.09:20,0,34	1/1:9,7:16:10.70:65,11,0	0/0:27,1:28:21.65:0,22,236	0/0:20,1:21:19.76:0,20,225	0/1:7,8:16:4.25:70,0,4	1/1:6,10:18:8.48:123,8,0	1/1:4,14:18:20.31:116,20,0	0/1:9,5:14:1.23:85,0,1	1/1:11,15:29:0.69:169,1,0	0/1:6,7:13:25.61:63,0,26	1/1:3,11:15:29.82:160,30,0	0/1:15,5:19:3.81:77,0,4	1/1:9,3:15:7.78:98,8,0	0/1:21,4:25:22.16:22,0,215	0/0:19,2:24:4.74:0,5,181	0/0:17,0:17:10.27:0,10,150	0/0:8,0:9:1.09:0,1,87
chr10	54762174	.	CGT	C	486.08	PASS	AB=0.917;AC=20;AF=0.400;AN=50;BaseQRankSum=-1.029;DP=561;FS=18.025;HRun=0;HaplotypeScore=81.9456;InbreedingCoeff=0.5016;MQ=65.88;MQ0=9;MQRankSum=1.519;QD=2.24;ReadPosRankSum=2.017;VQSLOD=0.2779;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:5.99:0,6,49	0/0:5,0:10:5.12:0,5,51	./.	./.	1/1:14,1:20:5.85:46,6,0	1/1:12,7:20:14.36:95,14,0	0/1:31,1:32:3.32:121,0,3	0/0:20,0:20:7.14:0,7,40	0/1:12,6:18:9.90:36,0,10	0/1:17,0:18:1.67:13,0,2	1/1:12,0:11:3.73:34,4,0	0/0:15,0:15:7.87:0,8,75	0/0:19,0:19:5.98:0,6,59	1/1:13,6:19:8.86:78,9,0	1/1:23,1:25:8.74:76,9,0	0/0:18,0:17:7.41:0,7,99	0/0:28,0:28:10.97:0,11,83	0/1:12,0:12:5.23:5,0,15	0/0:13,0:13:9.27:0,9,86	0/0:10,0:10:3:0,3,25	0/0:42,0:39:15.87:0,16,100	0/0:14,0:14:11.48:0,11,83	./.	0/0:15,0:30:6.43:0,6,51	1/1:10,0:10:2.87:28,3,0	1/1:20,0:20:16.47:70,16,0	0/0:16,0:16:13.42:0,13,120	1/1:10,0:10:9.06:51,9,0
chr10	54762219	.	GTA	G	464.92	PASS	AB=0.977;AC=17;AF=0.304;AN=56;BaseQRankSum=8.688;DP=586;FS=51.669;HRun=0;HaplotypeScore=87.8367;InbreedingCoeff=-0.4087;MQ=52.82;MQ0=17;MQRankSum=-1.561;QD=1.36;ReadPosRankSum=-1.567;VQSLOD=-0.5314;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:43:47.53:0,48,497	0/1:13,0:12:3.07:3,0,105	0/0:12,0:5:7.89:0,8,82	0/0:26,0:17:40.37:0,40,364	0/0:24,0:24:43.89:0,44,365	0/1:15,1:16:45.59:46,0,84	0/1:29,1:28:35.49:35,0,287	0/0:24,0:23:25.21:0,25,381	0/1:21,0:21:35.25:35,0,132	0/1:22,0:21:53.15:53,0,322	0/1:16,0:16:0.09:0,0,186	0/0:19,0:19:4.10:0,4,172	0/0:17,0:17:30.57:0,31,224	0/1:20,1:20:2.59:3,0,180	0/1:16,8:24:13.54:14,0,256	0/1:18,0:17:53.77:54,0,189	0/1:30,0:30:69.13:69,0,263	0/1:26,0:26:53.91:54,0,255	0/1:8,0:7:5.04:5,0,207	0/1:10,0:10:9.95:10,0,78	0/1:37,0:32:38.74:39,0,328	0/0:19,0:19:7.24:0,7,230	0/0:14,0:14:5.86:0,6,81	0/0:31,0:29:11.83:0,12,159	0/0:15,0:15:21.93:0,22,195	0/1:21,0:21:91.69:92,0,239	0/1:18,0:17:12.63:13,0,241	0/1:10,0:9:29.33:88,0,29
chr10	54763345	.	A	AT	416.68	PASS	AB=0.922;AC=7;AF=0.125;AN=56;BaseQRankSum=-5.641;DP=564;FS=5.810;HRun=12;HaplotypeScore=58.9329;InbreedingCoeff=0.4182;MQ=71.85;MQ0=0;MQRankSum=-0.128;QD=4.63;ReadPosRankSum=-1.103;VQSLOD=1.0075;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:30:67.59:0,68,487	1/1:4,6:10:18.03:175,18,0	0/0:14,0:13:3.73:0,4,19	0/0:9,0:8:4.94:0,5,28	0/0:24,1:26:23.49:0,23,327	0/0:20,1:22:20.35:0,20,300	0/0:17,0:17:31.82:0,32,224	0/1:23,2:26:1.33:1,0,302	0/0:16,0:16:38.75:0,39,284	0/0:25,0:26:52.66:0,53,378	0/0:22,0:25:53.78:0,54,368	0/0:16,0:16:44.72:0,45,327	0/0:15,0:15:32.77:0,33,241	0/0:19,1:20:27.48:0,27,363	0/0:24,1:25:17.75:0,18,296	1/1:6,14:20:2.98:338,3,0	0/0:28,0:29:76.53:0,77,549	0/0:15,1:20:16.62:0,17,263	0/1:15,1:16:9.04:9,0,202	0/0:38,1:42:63.30:0,63,593	0/0:4,0:5:10.98:0,11,72	0/0:16,0:17:34.82:0,35,246	0/0:23,0:23:53.66:0,54,394	0/0:4,0:6:16.01:0,16,99	0/0:16,0:19:44.86:0,45,302	0/0:24,0:25:37.67:0,38,264	0/0:26,0:26:61.64:0,62,442	0/1:14,2:17:14.65:15,0,219
chr10	54767746	.	TG	T	1085.99	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.222;DP=733;FS=4.586;HRun=2;HaplotypeScore=86.9836;InbreedingCoeff=0.9981;MQ=83.73;MQ0=0;MQRankSum=-1.086;QD=32.91;ReadPosRankSum=0.438;VQSLOD=3.6009;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,132,1978	1/1:0,9:9:27.09:350,27,0	0/0:22,0:22:65.69:0,66,869	0/0:26,0:26:66.88:0,67,849	0/0:10,0:10:30.09:0,30,431	0/0:27,0:27:81.26:0,81,1194	0/0:28,0:28:81.27:0,81,1203	0/0:33,0:33:99:0,99,1447	0/0:28,0:28:75.21:0,75,1098	0/0:33,0:33:87.29:0,87,1284	0/0:14,0:14:42.14:0,42,628	0/0:40,0:40:99:0,120,1748	0/0:30,0:30:84.28:0,84,1259	0/0:28,0:28:84.28:0,84,1256	0/0:33,0:33:96.31:0,96,1414	1/1:0,24:24:66.21:857,66,0	0/0:33,0:33:99:0,99,1484	0/0:26,0:26:75.25:0,75,1124	0/0:23,0:23:69.19:0,69,968	0/0:19,0:19:54.18:0,54,803	0/0:42,0:42:99:0,123,1832	0/0:29,0:29:87.29:0,87,1293	0/0:18,0:18:45.15:0,45,674	0/0:23,0:23:63.21:0,63,938	0/0:25,0:25:72.24:0,72,1067	0/0:35,0:35:99:0,105,1548	0/0:22,0:22:66.21:0,66,967	0/0:8,0:8:24.08:0,24,360
chr10	54770730	.	TTTGACTCAGAGAGAACAGGAATCTATGTCTTC	T	18970.81	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=12.575;DP=646;FS=10.840;HRun=0;HaplotypeScore=477.7095;InbreedingCoeff=0.9711;MQ=82.32;MQ0=0;MQRankSum=-13.050;QD=89.91;ReadPosRankSum=3.772;VQSLOD=2.4689;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,135,12743	0/0:13,0:13:39.13:0,39,4369	0/0:28,0:29:72.17:0,72,3873	0/0:26,0:25:60.68:0,61,3628	1/1:4,11:15:9.03:749,9,0	1/1:1,14:15:21.07:1747,21,0	1/1:5,19:24:12.04:998,12,0	1/1:24,0:24:47.84:418,48,0	1/1:6,8:14:6.02:499,6,0	1/1:4,25:29:56.80:2008,57,0	1/1:0,11:11:21.07:1425,21,0	0/0:36,0:36:96.29:0,96,11551	0/0:35,0:35:99:0,102,11693	1/1:1,15:16:27.09:2241,27,0	1/1:3,22:25:42.14:3487,42,0	0/0:23,0:23:69.24:0,69,8741	0/0:20,0:20:60.21:0,60,7406	0/0:18,0:18:51.18:0,51,6106	0/0:28,0:28:65.78:0,66,5876	0/0:30,0:30:83.86:0,84,9117	0/0:27,0:27:69.22:0,69,7116	0/0:27,0:27:75.24:0,75,8314	0/0:26,0:26:72.24:0,72,9603	0/0:26,0:26:75.22:0,75,8779	1/1:2,11:13:24.08:1996,24,0	1/1:1,12:13:29.88:1158,30,0	0/0:24,0:24:69.21:0,69,8139	1/1:0,12:12:27.09:2246,27,0
chr10	54771615	.	AGAG	A	394.58	PASS	AB=0.927;AC=11;AF=0.220;AN=50;BaseQRankSum=2.807;DP=236;FS=13.093;HRun=0;HaplotypeScore=33.0710;InbreedingCoeff=-0.0223;MQ=38.13;MQ0=29;MQRankSum=-2.455;QD=4.07;ReadPosRankSum=0.453;VQSLOD=-0.3549;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:13:26.82:0,27,258	./.	0/0:2,0:1:3.01:0,3,49	0/0:6,0:1:0:0,0,0	0/0:10,0:10:11.63:0,12,159	0/1:14,0:14:40.82:41,0,91	0/0:12,0:8:2.08:0,2,67	0/1:21,0:17:16.43:16,0,103	0/0:10,0:9:12.46:0,12,136	0/1:8,3:11:90.59:129,0,91	1/1:3,4:6:6.02:75,6,0	0/0:4,0:4:6.49:0,6,74	0/0:5,0:4:6.89:0,7,75	0/1:10,0:9:12.77:21,0,13	0/1:8,0:7:41.49:41,0,43	0/0:5,0:4:5.89:0,6,60	0/0:4,0:2:1.55:0,2,4	0/0:4,0:4:3.31:0,3,10	0/0:16,0:10:18.75:0,19,180	./.	0/0:29,0:25:13.80:0,14,189	./.	0/0:4,0:4:5.81:0,6,90	0/0:2,0:2:2.97:0,3,20	0/1:8,1:9:20.06:38,0,20	0/1:7,1:8:30.54:113,0,31	0/0:3,0:3:3.01:0,3,46	1/1:4,4:6:3.01:53,3,0
chr10	54771637	.	G	GA	47.56	PASS	AB=0.952;AC=8;AF=0.148;AN=54;BaseQRankSum=4.132;DP=241;FS=21.046;HRun=0;HaplotypeScore=33.6876;InbreedingCoeff=-0.0085;MQ=44.43;MQ0=39;MQRankSum=-2.985;QD=0.69;ReadPosRankSum=2.355;VQSLOD=0.0979;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:7:16.16:0,16,183	0/0:3,0:3:5.98:0,6,62	./.	0/0:5,0:2:2.04:0,2,6	0/0:8,0:5:9.03:0,9,126	0/0:6,0:4:11.86:0,12,124	0/0:10,0:8:13.53:0,14,187	0/0:11,0:8:18.89:0,19,215	0/0:6,0:5:14.93:0,15,166	0/0:6,0:3:3.01:0,3,42	0/0:6,0:5:15.04:0,15,193	0/0:5,0:5:15.04:0,15,189	0/0:7,0:6:6.48:0,6,70	0/0:6,0:5:13.86:0,14,173	0/1:14,1:14:1.60:2,0,397	0/1:12,0:10:9.48:9,0,241	0/1:10,1:11:13.59:14,0,282	0/1:4,0:3:10.04:10,0,53	0/0:13,0:4:9.03:0,9,126	0/0:8,0:4:6.01:0,6,69	0/0:33,0:25:35.82:0,36,460	0/0:3,0:2:6.01:0,6,67	0/0:5,0:5:15.04:0,15,195	0/1:10,2:12:69.60:70,0,114	0/1:12,0:9:16:16,0,308	0/0:9,0:5:13.59:0,14,172	1/1:3,0:1:3.01:46,3,0	0/0:7,0:5:6.02:0,6,84
chr10	54771884	.	GA	G	5980.96	PASS	AB=0.600;AC=43;AF=0.768;AN=56;BaseQRankSum=-0.085;DP=502;FS=2.025;HRun=12;HaplotypeScore=67.7343;InbreedingCoeff=0.4563;MQ=68.31;MQ0=4;MQRankSum=-0.314;QD=14.07;ReadPosRankSum=1.569;VQSLOD=5.5066;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,25:37:33.43:558,33,0	0/0:3,0:3:6.01:0,6,61	0/0:32,0:15:25.05:0,25,187	0/0:27,1:12:10.08:0,10,99	1/1:3,11:14:23.86:186,24,0	1/1:3,11:14:35.86:278,36,0	1/1:4,12:16:32.87:255,33,0	1/1:10,16:26:25.95:347,26,0	1/1:3,16:19:41.82:325,42,0	1/1:5,13:19:11.70:269,12,0	1/1:2,3:6:10.97:73,11,0	1/1:5,13:19:31.90:238,32,0	1/1:5,17:22:44.41:344,44,0	1/1:5,16:23:36.94:267,37,0	1/1:6,15:22:34.88:261,35,0	0/0:13,1:14:15.87:0,16,336	0/1:5,11:17:36.57:217,0,37	0/1:5,16:23:5.97:305,0,6	1/1:4,15:19:45.67:346,46,0	1/1:0,3:3:8.97:70,9,0	0/1:6,13:18:10.16:257,0,10	1/1:4,13:17:32.81:255,33,0	0/1:5,10:15:0.59:179,0,1	0/1:13,14:27:16.09:257,0,16	1/1:0,5:5:8.97:70,9,0	1/1:4,13:18:22.15:278,22,0	1/1:5,9:15:1.48:184,1,0	1/1:1,9:10:20.92:163,21,0
chr10	54772219	.	C	CTT	42.70	PASS	AB=0.754;AC=5;AF=0.089;AN=56;BaseQRankSum=4.676;DP=207;FS=41.961;HRun=0;HaplotypeScore=38.7654;InbreedingCoeff=-0.0012;MQ=80.79;MQ0=5;MQRankSum=-3.417;QD=2.67;ReadPosRankSum=-0.417;VQSLOD=0.4732;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:3,2:5:47.14:47,0,129	0/0:2,0:2:6:0,6,73	0/0:31,0:13:30.58:0,31,335	0/0:52,0:19:11.23:0,11,338	0/0:2,0:2:6.02:0,6,98	0/0:4,0:4:10.28:0,10,141	0/0:10,0:10:30.03:0,30,458	0/0:13,0:12:36.06:0,36,451	0/0:7,0:7:2.08:0,2,274	0/0:2,0:2:6.02:0,6,98	0/0:2,0:2:6.02:0,6,98	0/0:3,0:3:9.02:0,9,123	0/0:1,0:1:3.01:0,3,49	0/0:6,0:6:18.05:0,18,269	0/0:3,0:3:9:0,9,98	0/0:6,0:6:17.95:0,18,211	0/1:3,2:5:11.56:67,0,12	1/1:1,0:1:0.47:1,0,0	0/0:3,0:3:9.03:0,9,128	0/0:3,0:3:6.02:0,6,98	0/0:11,1:12:15.12:0,15,422	0/0:4,0:4:9.03:0,9,147	0/0:5,0:5:15.04:0,15,220	0/0:6,0:5:12.04:0,12,195	0/1:4,1:5:25.59:26,0,111	0/0:5,0:5:15.04:0,15,215	0/0:5,0:5:15:0,15,191	0/0:1,0:1:3.01:0,3,49
chr10	54775014	.	TTGGC	T	8032.08	PASS	AC=46;AF=0.852;AN=54;BaseQRankSum=14.975;DP=364;FS=3.547;HRun=0;HaplotypeScore=278.6551;InbreedingCoeff=0.8388;MQ=108.38;MQ0=0;MQRankSum=-14.735;QD=35.23;ReadPosRankSum=9.954;VQSLOD=3.7252;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:1,8:9:21.07:293,21,0	0/0:13,0:13:39.13:0,39,1113	0/0:37,0:37:99:0,108,2917	0/0:44,0:44:99:0,127,3356	1/1:1,11:12:27.29:323,27,0	1/1:1,9:10:30.09:408,30,0	1/1:0,4:4:12.04:170,12,0	1/1:1,0:1:3:27,3,0	1/1:1,8:9:24.08:341,24,0	1/1:1,7:8:19.05:302,19,0	1/1:1,6:7:21.05:275,21,0	1/1:2,9:11:33.08:432,33,0	1/1:1,11:12:34.93:470,35,0	1/1:2,9:11:19.20:349,19,0	1/1:5,12:17:31.24:505,31,0	0/0:42,0:42:99:0,126,3482	1/1:3,5:8:18.04:232,18,0	1/1:1,10:11:33.09:465,33,0	1/1:1,7:8:23.67:320,24,0	1/1:3,11:14:31.90:491,32,0	1/1:2,1:3:2.98:22,3,0	1/1:0,14:14:39.13:547,39,0	1/1:0,11:11:30.10:421,30,0	1/1:3,5:8:1.14:94,1,0	1/1:0,8:8:24.08:340,24,0	1/1:1,13:14:42.13:593,42,0	1/1:4,14:18:31.58:614,32,0	./.
chr10	54775019	.	AGTACCTGCACTTCGTATGAACATTCC	A	35853.07	PASS	AC=44;AF=0.846;AN=52;BaseQRankSum=15.408;DP=336;FS=8.411;HRun=0;HaplotypeScore=340.7607;InbreedingCoeff=0.9180;MQ=116.49;MQ0=0;MQRankSum=-15.318;QD=182.00;ReadPosRankSum=11.409;VQSLOD=3.2367;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:0,8:8:21.07:1369,21,0	0/0:14,0:14:42.14:0,42,4614	0/0:36,0:36:99:0,108,6940	0/0:45,0:45:99:0,130,8917	1/1:1,11:12:30.10:1625,30,0	1/1:0,9:9:27.09:1767,27,0	1/1:0,4:4:12.04:785,12,0	./.	1/1:0,8:8:24.08:1571,24,0	1/1:0,7:7:21.07:1381,21,0	1/1:0,6:6:18.06:1173,18,0	1/1:0,9:9:27.09:1766,27,0	1/1:1,11:12:36.12:2190,36,0	1/1:0,9:9:24.08:1568,24,0	1/1:0,12:12:33.11:2159,33,0	0/0:44,0:44:99:0,132,13792	1/1:0,5:5:15.05:978,15,0	1/1:0,10:10:30.10:1978,30,0	1/1:1,7:8:24.08:1445,24,0	1/1:1,11:12:36.12:2194,36,0	1/1:0,1:1:3.01:60,3,0	1/1:0,14:14:39.13:2546,39,0	1/1:0,11:11:30.10:1958,30,0	1/1:0,5:5:9.03:450,9,0	1/1:0,8:8:24.08:1570,24,0	1/1:0,13:13:39.13:2566,39,0	1/1:0,14:14:42.14:2753,42,0	./.
chr10	54775035	.	ATGAACATTCC	A	15940.43	PASS	AC=44;AF=0.846;AN=52;BaseQRankSum=14.964;DP=328;FS=8.706;HRun=0;HaplotypeScore=292.0292;InbreedingCoeff=0.9177;MQ=119.10;MQ0=0;MQRankSum=-14.939;QD=80.51;ReadPosRankSum=11.884;VQSLOD=2.7100;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:8,0:8:21.07:607,21,0	0/0:14,0:14:42.14:0,42,2241	0/0:34,0:34:99:0,99,4755	0/0:43,0:43:99:0,123,4816	1/1:11,0:11:24.08:671,24,0	1/1:9,0:9:27.09:787,27,0	1/1:4,0:4:12.04:350,12,0	./.	1/1:8,0:8:24.08:700,24,0	1/1:7,0:7:21.07:620,21,0	1/1:6,2:8:18.06:520,18,0	1/1:9,0:9:27.09:786,27,0	1/1:11,0:11:33.11:959,33,0	1/1:9,0:9:24.08:697,24,0	1/1:12,0:11:33.11:961,33,0	0/0:39,0:39:99:0,117,6031	1/1:5,0:5:15.05:434,15,0	1/1:10,0:10:30.10:890,30,0	1/1:7,2:9:27.05:697,27,0	1/1:11,0:11:33.11:963,33,0	1/1:1,0:1:2.99:23,3,0	1/1:14,0:14:39.13:1131,39,0	1/1:11,0:11:30.10:870,30,0	1/1:5,0:5:9:195,9,0	1/1:8,0:8:24.08:699,24,0	1/1:14,0:13:39.13:1152,39,0	1/1:14,0:14:42.14:1230,42,0	./.
chr10	54777707	.	TGAGA	T	658.02	PASS	AB=0.936;AC=26;AF=0.591;AN=44;BaseQRankSum=1.618;DP=520;FS=1.234;HRun=0;HaplotypeScore=117.5998;InbreedingCoeff=0.2034;MQ=67.37;MQ0=8;MQRankSum=-2.861;QD=2.25;ReadPosRankSum=0.437;VQSLOD=2.2865;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:18:2.77:28,3,0	./.	./.	./.	1/1:14,0:14:3:27,3,0	1/1:29,0:35:2.98:28,3,0	0/1:21,0:23:0.01:26,0,0	0/0:22,0:22:1.72:0,2,4	0/1:17,0:18:2.24:106,0,2	1/1:6,1:7:3.01:46,3,0	1/1:10,1:12:2.94:46,3,0	0/1:16,0:17:9.63:20,0,10	0/1:28,0:28:2.39:41,0,2	1/1:20,3:23:2.84:46,3,0	1/1:13,5:18:9.03:139,9,0	1/1:14,0:16:7.98:61,8,0	0/0:19,0:22:4.69:0,5,23	0/0:12,0:21:18.95:0,19,328	0/0:15,0:15:3.01:0,3,69	./.	0/0:23,0:22:15.05:0,15,327	0/0:15,0:16:5.49:0,5,25	./.	0/1:14,2:17:6.45:40,0,6	./.	1/1:15,2:16:6.01:74,6,0	0/1:20,0:20:18.21:18,0,320	1/1:6,2:8:3.01:46,3,0
chr10	54778443	.	C	CTA	196.59	PASS	AB=0.977;AC=10;AF=0.179;AN=56;BaseQRankSum=5.114;DP=380;FS=1.618;HRun=0;HaplotypeScore=106.8396;InbreedingCoeff=0.2697;MQ=69.09;MQ0=9;MQRankSum=-2.320;QD=2.34;ReadPosRankSum=2.482;VQSLOD=1.9025;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:16,1:17:30.72:31,0,34	0/0:6,0:6:15.02:0,15,187	0/0:4,0:3:2.80:0,3,36	0/0:22,0:15:5.73:0,6,25	0/0:23,0:23:38.92:0,39,535	0/0:25,0:25:27.02:0,27,316	0/0:6,0:6:12.04:0,12,164	0/0:51,0:42:99:0,100,1164	0/0:8,0:8:12.51:0,13,164	0/0:17,0:16:42.12:0,42,546	0/0:12,0:12:27.06:0,27,368	0/1:8,0:8:2.64:56,0,3	0/1:8,0:8:12.67:45,0,13	0/0:7,0:7:9.01:0,9,96	0/0:9,0:9:17.50:0,18,178	0/0:10,0:10:21.07:0,21,289	1/1:13,2:15:12.60:151,13,0	0/1:10,1:11:16.89:17,0,58	0/0:18,0:16:45.11:0,45,561	0/1:18,0:18:15.64:16,0,233	0/0:5,0:5:12.04:0,12,164	1/1:3,0:3:4.17:20,4,0	0/0:5,0:5:7.78:0,8,70	0/1:4,0:4:0.55:1,0,3	0/0:25,0:24:54.17:0,54,722	0/0:7,0:7:15.51:0,16,189	0/0:14,0:14:18.04:0,18,229	0/0:22,0:21:8.51:0,9,171
chr10	54778449	.	C	CTA	1644.52	PASS	AB=0.837;AC=16;AF=0.286;AN=56;BaseQRankSum=0.651;DP=378;FS=12.167;HRun=0;HaplotypeScore=110.8601;InbreedingCoeff=0.5874;MQ=71.80;MQ0=9;MQRankSum=0.951;QD=15.37;ReadPosRankSum=-2.321;VQSLOD=2.4038;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:14,3:17:25.89:393,26,0	0/0:6,0:6:15.05:0,15,206	0/0:6,0:5:3.52:0,4,39	0/1:19,0:15:15.64:17,0,16	0/0:22,0:22:41.91:0,42,555	0/0:25,0:25:20.98:0,21,217	0/0:5,0:5:9.03:0,9,123	0/0:46,0:39:99:0,102,1232	0/0:7,0:7:15.05:0,15,202	0/0:17,0:16:33.10:0,33,433	0/0:16,0:16:18.49:0,18,230	1/1:4,3:7:17.43:279,17,0	1/1:4,4:8:18.06:307,18,0	0/0:6,0:6:8.98:0,9,72	0/0:10,0:10:17.50:0,18,178	0/0:12,0:12:27.07:0,27,344	1/1:9,5:14:13.24:362,13,0	0/1:9,2:11:16.63:164,0,17	0/0:18,0:16:48.13:0,48,609	0/1:17,0:17:33.77:34,0,100	0/0:6,0:6:12.04:0,12,165	1/1:0,2:2:6.02:105,6,0	1/1:6,0:6:9.02:120,9,0	0/1:0,3:3:1.20:48,0,1	0/0:24,0:23:45.15:0,45,611	0/0:6,0:6:8.35:0,8,69	0/0:16,0:16:12.04:0,12,162	0/0:21,0:20:8.50:0,8,154
chr10	54778455	.	CTA	C	1169.38	PASS	AB=0.925;AC=24;AF=0.429;AN=56;BaseQRankSum=2.684;DP=365;FS=3.322;HRun=0;HaplotypeScore=116.1328;InbreedingCoeff=-0.1339;MQ=86.07;MQ0=7;MQRankSum=-2.789;QD=4.91;ReadPosRankSum=-1.532;VQSLOD=2.9332;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:15,0:15:17.93:18,0,24	0/0:6,0:6:2.44:0,2,113	0/1:8,0:8:2.02:2,0,7	0/1:28,2:24:19.99:98,0,20	0/1:20,2:22:58.70:59,0,461	0/0:24,0:24:15.05:0,15,254	0/1:4,0:4:24.37:24,0,90	0/1:34,13:38:99:455,0,429	1/1:7,0:7:1.97:90,2,0	0/0:13,0:12:23.81:0,24,410	0/1:8,4:12:49.49:55,0,49	1/1:7,0:7:9.66:29,10,0	0/1:7,0:7:12.53:13,0,27	0/1:6,1:7:36.30:36,0,49	0/0:10,0:10:14.64:0,15,217	0/1:12,0:12:4.29:4,0,223	0/1:14,0:14:27.69:38,0,28	0/1:9,0:9:27.07:62,0,27	0/0:20,0:19:56.96:0,57,795	0/0:14,0:14:25.50:0,25,228	0/0:6,0:6:14.37:0,14,171	1/1:2,0:2:4.26:13,4,0	1/1:4,0:4:3.11:8,3,0	1/1:3,0:3:1.92:7,2,0	0/1:19,2:20:99:230,0,180	0/1:3,1:4:39.35:89,0,39	0/0:14,0:14:8.02:0,8,54	0/0:20,0:20:17.80:0,18,274
chr10	54778461	.	CTA	C	842.01	PASS	AB=0.992;AC=23;AF=0.411;AN=56;BaseQRankSum=1.748;DP=373;FS=21.153;HRun=0;HaplotypeScore=122.2278;InbreedingCoeff=-0.2037;MQ=93.06;MQ0=7;MQRankSum=-2.620;QD=3.02;ReadPosRankSum=1.854;VQSLOD=0.9780;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:10,0:10:22.35:58,0,22	0/0:5,0:5:2.29:0,2,45	1/1:18,0:13:0.17:17,0,0	0/1:38,0:30:41.82:42,0,131	0/1:21,0:21:0.49:0,0,416	0/0:23,0:23:12.04:0,12,158	0/1:4,0:4:4.99:5,0,19	0/1:46,4:41:47.75:445,0,48	1/1:8,0:8:8.04:32,8,0	0/1:14,0:14:17.73:18,0,204	0/1:11,0:11:13.33:13,0,39	0/0:6,0:6:12.81:0,13,83	0/1:7,0:7:12.08:12,0,43	0/1:6,0:6:1.47:1,0,30	0/0:10,0:10:8.59:0,9,105	0/1:11,0:11:7.29:7,0,126	0/1:13,0:14:51.47:51,0,79	0/1:7,0:7:35.88:78,0,36	0/1:18,1:19:31.83:32,0,261	0/0:17,1:18:27.97:0,28,178	0/0:6,0:6:6.47:0,6,112	0/0:2,0:2:2.92:0,3,18	1/1:2,0:2:5.99:50,6,0	0/0:2,0:2:0:0,0,0	0/1:19,0:18:62.72:63,0,109	0/1:4,0:4:24.12:24,0,39	1/1:15,1:16:3.01:43,3,0	0/0:22,0:22:15.65:0,16,144
chr10	54778463	.	A	ATC	3448.66	PASS	AB=0.862;AC=27;AF=0.482;AN=56;BaseQRankSum=3.384;DP=375;FS=40.049;HRun=0;HaplotypeScore=116.4246;InbreedingCoeff=-0.5084;MQ=92.71;MQ0=6;MQRankSum=-1.888;QD=9.91;ReadPosRankSum=4.238;VQSLOD=1.1655;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:7,2:10:4.36:99,0,4	0/1:3,3:6:9.94:162,0,10	0/1:18,0:13:10.41:10,0,25	0/1:37,0:30:18.92:19,0,192	0/1:16,5:21:99:191,0,353	0/1:23,0:23:27.64:28,0,79	0/1:2,1:3:23.95:51,0,24	0/1:49,0:42:31:918,0,31	1/1:5,3:8:11.25:179,11,0	0/1:14,0:14:99:263,0,165	0/1:9,3:12:32.91:110,0,33	0/0:7,0:7:12.81:0,13,85	0/1:4,1:6:26.61:47,0,27	0/1:6,0:6:1.07:14,0,1	1/1:9,0:9:9.02:48,9,0	0/1:5,5:10:93.98:210,0,94	0/1:10,2:15:75.69:101,0,76	0/1:6,1:7:40.11:158,0,40	0/1:18,0:18:47.29:47,0,177	0/1:17,0:17:32.40:67,0,32	0/1:6,0:6:1.65:2,0,82	0/0:2,0:2:2.94:0,3,18	1/1:2,0:2:5.99:50,6,0	0/0:1,0:2:2.04:0,2,6	0/1:10,11:20:98.11:484,0,98	0/1:2,2:4:32.93:157,0,33	0/0:16,0:16:2.04:0,2,6	0/1:22,0:23:30.51:31,0,32
chr10	54778465	.	ATC	A	2004.15	PASS	AB=0.873;AC=24;AF=0.429;AN=56;BaseQRankSum=-1.928;DP=375;FS=8.682;HRun=0;HaplotypeScore=122.3492;InbreedingCoeff=0.2198;MQ=95.25;MQ0=6;MQRankSum=-2.774;QD=9.45;ReadPosRankSum=1.642;VQSLOD=2.8373;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,3:10:6.26:121,6,0	0/0:5,0:5:8.89:0,9,97	0/1:19,0:14:2.69:3,0,14	0/0:43,0:33:17.60:0,18,235	0/1:19,2:21:67.37:67,0,385	0/0:22,0:22:11.75:0,12,80	1/1:4,0:4:5.94:58,6,0	1/1:34,14:40:29.28:758,29,0	1/1:6,2:8:3.80:92,4,0	0/1:13,0:13:62.72:117,0,63	0/1:7,5:12:21.27:55,0,21	0/0:6,0:6:1.89:0,2,5	1/1:4,1:5:2.51:55,3,0	0/1:6,0:6:14.19:26,0,14	0/0:9,0:9:11.29:0,11,70	0/0:10,0:10:20.31:0,20,191	1/1:11,4:15:7.83:158,8,0	0/1:4,3:7:33.51:187,0,34	0/0:17,0:17:23.40:0,23,302	0/0:18,0:18:27.98:0,28,188	0/0:6,0:6:11.07:0,11,133	0/0:2,0:2:0.47:0,0,1	1/1:0,2:2:6.02:84,6,0	0/0:2,0:2:0:0,0,0	0/1:19,2:20:38.36:282,0,38	0/1:3,1:4:14.96:90,0,15	1/1:16,0:16:2.96:19,3,0	0/0:23,0:23:7.53:0,8,64
chr10	54778467	.	C	CTATCTATA	7592.95	PASS	AB=0.946;AC=43;AF=0.768;AN=56;BaseQRankSum=-3.400;DP=391;FS=8.666;HRun=0;HaplotypeScore=130.0322;InbreedingCoeff=-0.0881;MQ=94.70;MQ0=6;MQRankSum=-2.287;QD=19.88;ReadPosRankSum=4.229;VQSLOD=3.5662;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,0:11:11.54:253,12,0	1/1:5,0:5:9.02:100,9,0	0/1:18,0:14:8.15:8,0,48	0/1:43,0:34:25.87:26,0,237	0/1:20,0:20:99:291,0,275	1/1:3,19:24:5.87:264,6,0	1/1:4,0:4:9:131,9,0	1/1:49,0:43:92.23:1760,92,0	1/1:8,0:8:12.04:272,12,0	1/1:3,7:13:20.30:626,20,0	1/1:11,0:12:9.03:191,9,0	0/0:6,0:6:1.19:0,1,4	1/1:5,0:6:7.03:185,7,0	1/1:1,5:8:5.97:151,6,0	1/1:1,7:11:12.04:371,12,0	0/1:11,0:11:75.12:117,0,75	1/1:12,0:15:13.73:437,14,0	0/1:8,0:8:13.83:285,0,14	0/1:18,0:18:9.38:475,0,9	0/1:18,0:18:26.43:84,0,26	0/1:6,0:6:43.25:43,0,80	0/0:3,0:3:0.44:0,0,1	1/1:2,0:2:6.02:84,6,0	1/1:1,0:2:0.89:2,1,0	1/1:21,0:20:36:815,36,0	1/1:5,0:5:9.03:232,9,0	1/1:18,0:18:2.60:10,3,0	0/1:1,15:22:8.37:380,0,8
chr10	54778471	.	ATC	A	2328.73	PASS	AB=1.000;AC=34;AF=0.607;AN=56;BaseQRankSum=-4.043;DP=388;FS=8.254;HRun=0;HaplotypeScore=129.1742;InbreedingCoeff=0.3959;MQ=98.26;MQ0=5;MQRankSum=-3.989;QD=8.62;ReadPosRankSum=0.223;VQSLOD=2.5008;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:11:6.90:122,7,0	0/0:5,0:5:8.86:0,9,64	0/1:23,0:17:3.88:4,0,76	0/0:45,0:35:9.01:0,9,239	0/1:19,0:19:93.42:93,0,140	0/1:23,0:23:7.78:17,0,8	1/1:4,0:4:5.94:58,6,0	1/1:38,12:47:47.68:873,48,0	1/1:7,0:7:3.80:92,4,0	1/1:10,0:10:7.40:130,7,0	1/1:13,0:13:3.71:84,4,0	0/0:6,0:6:0.47:0,0,1	1/1:6,0:6:3.99:57,4,0	0/1:8,0:8:3.50:26,0,4	0/0:11,0:11:9.86:0,10,34	0/0:10,0:10:20.16:0,20,131	1/1:15,0:15:11.85:146,12,0	0/1:8,0:8:4.33:170,0,4	0/1:19,0:19:1.91:2,0,142	0/0:18,0:18:27.95:0,28,144	0/0:5,0:5:10.95:0,11,86	1/1:4,0:4:3:25,3,0	1/1:3,0:3:9.02:109,9,0	1/1:3,0:3:2.69:25,3,0	1/1:18,0:17:27.81:322,28,0	1/1:6,0:6:11.59:127,12,0	1/1:20,0:20:2.96:19,3,0	0/0:17,0:17:5.58:0,6,27
chr10	54778473	.	C	CTATCTATATATA	8100.87	PASS	AB=1.000;AC=51;AF=0.911;AN=56;BaseQRankSum=-5.041;DP=393;FS=6.047;HRun=0;HaplotypeScore=157.7664;InbreedingCoeff=0.3483;MQ=99.67;MQ0=5;MQRankSum=-5.688;QD=23.90;ReadPosRankSum=2.514;VQSLOD=3.4675;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,0:12:12.21:143,12,0	1/1:5,0:5:8.78:78,9,0	0/1:24,0:18:19.37:19,0,146	0/0:47,0:36:19.76:0,20,247	1/1:18,0:18:27.95:347,28,0	1/1:20,0:20:8.88:167,9,0	1/1:3,0:3:6.02:107,6,0	1/1:45,0:42:99:1562,123,0	1/1:7,0:7:12.04:246,12,0	1/1:9,0:9:27.08:480,27,0	1/1:13,0:13:11.91:214,12,0	0/0:7,0:7:0.47:0,0,1	1/1:6,0:6:8.85:127,9,0	1/1:7,0:7:6.01:89,6,0	1/1:11,0:11:12.04:265,12,0	1/1:10,0:10:19.39:213,19,0	1/1:14,0:14:26.73:421,27,0	1/1:10,0:10:19.89:197,20,0	1/1:1,15:23:69.11:1661,69,0	1/1:2,16:22:3.01:184,3,0	1/1:6,0:6:9.02:172,9,0	1/1:4,0:4:5.99:50,6,0	1/1:5,0:5:14.79:106,15,0	1/1:3,0:3:3:25,3,0	1/1:18,0:17:35.87:648,36,0	1/1:6,0:6:18.04:244,18,0	1/1:2,19:23:3:29,3,0	1/1:15,0:15:14.98:307,15,0
chr10	54778498	.	GAGAT	G	2018.75	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=2.952;DP=409;FS=8.527;HRun=0;HaplotypeScore=123.0546;InbreedingCoeff=0.9159;MQ=89.54;MQ0=1;MQRankSum=-5.207;QD=30.13;ReadPosRankSum=2.075;VQSLOD=3.4700;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,7:11:18:318,18,0	0/0:6,0:6:18.06:0,18,454	0/0:24,0:20:24.07:0,24,492	0/0:33,0:26:1.96:0,2,287	0/0:12,0:12:30.10:0,30,752	0/0:23,0:23:17.80:0,18,449	0/0:4,0:4:12.04:0,12,244	0/0:37,0:37:99:0,99,2269	0/0:8,0:8:24.08:0,24,612	0/0:15,0:15:42.14:0,42,1023	0/0:12,0:12:36.12:0,36,861	1/1:1,9:10:18.06:314,18,0	1/1:1,4:5:12.04:212,12,0	0/0:13,0:13:24.08:0,24,606	0/0:15,0:15:21.07:0,21,460	0/0:13,0:13:39.13:0,39,960	1/1:4,6:10:18.06:317,18,0	1/1:0,9:9:21.07:371,21,0	0/0:15,0:15:39.13:0,39,933	0/0:23,0:23:45.15:0,45,984	0/0:7,0:7:12.04:0,12,308	1/1:0,5:5:12.04:209,12,0	1/1:1,10:11:21.07:371,21,0	1/1:2,4:6:5.69:106,6,0	0/0:22,0:21:56.78:0,57,1391	0/0:12,0:12:36.12:0,36,882	0/0:29,0:29:33.11:0,33,780	0/0:19,0:19:18.06:0,18,387
chr10	54779786	.	A	AG	1233.56	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-3.590;DP=785;FS=1.417;HRun=4;HaplotypeScore=113.8155;InbreedingCoeff=0.9955;MQ=84.30;MQ0=0;MQRankSum=-2.692;QD=33.34;ReadPosRankSum=2.535;VQSLOD=3.1466;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,141,1600	1/1:1,6:7:18.06:246,18,0	0/0:21,0:21:57.13:0,57,629	0/0:25,0:25:63.14:0,63,700	0/0:19,0:19:51.15:0,51,578	0/0:24,0:24:69.20:0,69,783	0/0:41,0:41:99:0,120,1341	0/0:33,0:33:93.24:0,93,1037	0/0:23,0:23:63.18:0,63,714	0/0:38,0:38:99:0,114,1287	0/0:13,0:13:33.08:0,33,365	0/0:29,0:29:75.20:0,75,841	0/0:32,0:32:87.25:0,87,987	0/0:36,0:36:99:0,102,1157	0/0:41,0:41:99:0,120,1340	1/1:1,29:30:81.27:1107,81,0	0/0:27,0:27:75.18:0,75,850	0/0:31,0:31:84.24:0,84,953	0/0:15,0:15:39.09:0,39,431	0/0:20,0:20:54.15:0,54,613	0/0:59,0:59:99:0,162,1817	0/0:25,0:25:66.19:0,66,748	0/0:14,0:14:42.12:0,42,476	0/0:39,0:39:99:0,111,1233	0/0:13,0:13:36.10:0,36,408	0/0:37,0:37:99:0,108,1225	0/0:28,0:28:81.23:0,81,919	0/0:13,0:13:36.10:0,36,408
chr10	54780121	.	T	TAATAAC	6915.25	PASS	AB=1.000;AC=50;AF=0.893;AN=56;BaseQRankSum=-0.032;DP=299;FS=0.000;HRun=0;HaplotypeScore=60.8551;InbreedingCoeff=0.3077;MQ=60.58;MQ0=2;MQRankSum=-0.003;QD=23.93;ReadPosRankSum=0.902;VQSLOD=4.3017;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,0:10:13.90:100,14,0	1/1:2,0:2:5.99:49,6,0	0/0:3,0:2:6.01:0,6,65	0/0:7,0:5:3.01:0,3,35	1/1:3,7:10:11.90:157,12,0	1/1:2,10:12:9.03:313,9,0	1/1:0,3:3:6.02:190,6,0	1/1:50,0:49:99:1334,126,0	1/1:2,7:9:6.02:209,6,0	1/1:2,6:10:20.97:394,21,0	1/1:1,5:6:14.71:169,15,0	1/1:6,0:6:14.99:159,15,0	1/1:5,0:5:11.99:100,12,0	1/1:5,0:5:14.92:117,15,0	1/1:3,7:10:12.04:408,12,0	0/1:8,0:8:27.97:126,0,28	1/1:19,0:19:7.39:476,7,0	0/1:16,0:16:29.15:264,0,29	1/1:16,0:16:44.89:493,45,0	1/1:16,0:16:41.71:327,42,0	1/1:7,0:7:20.97:173,21,0	1/1:7,0:7:11.67:100,12,0	1/1:3,0:3:5.99:50,6,0	1/1:4,0:4:8.02:56,8,0	1/1:5,12:18:9.02:237,9,0	1/1:4,0:4:12.02:135,12,0	1/1:2,0:19:18.06:468,18,0	1/1:0,13:14:9.03:313,9,0
chr10	54782879	.	GA	G	10613.42	PASS	AB=0.806;AC=52;AF=0.929;AN=56;BaseQRankSum=-5.199;DP=547;FS=1.694;HRun=10;HaplotypeScore=80.5943;InbreedingCoeff=0.4511;MQ=80.08;MQ0=0;MQRankSum=-4.493;QD=20.33;ReadPosRankSum=4.673;VQSLOD=5.5466;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,24:25:65.99:573,66,0	1/1:3,5:8:17.99:156,18,0	0/1:31,0:22:24.37:24,0,224	0/0:24,1:20:28.30:0,28,224	1/1:1,30:31:86.97:754,87,0	1/1:5,14:19:41.97:365,42,0	1/1:1,8:9:20.99:182,21,0	1/1:6,19:26:59.02:501,59,0	1/1:0,8:8:24:208,24,0	1/1:4,15:19:34.65:374,35,0	1/1:0,26:26:71.96:621,72,0	1/1:5,18:23:47.97:417,48,0	1/1:1,15:16:35.99:313,36,0	1/1:0,6:6:18:156,18,0	1/1:2,19:21:41.99:365,42,0	1/1:2,15:17:47.99:417,48,0	1/1:2,23:25:65.94:565,66,0	1/1:3,20:23:50.99:443,51,0	1/1:2,15:17:44.99:390,45,0	1/1:2,26:28:74.98:651,75,0	0/1:4,7:11:42.37:132,0,42	1/1:1,21:22:59.99:521,60,0	1/1:0,20:20:53.99:469,54,0	1/1:1,6:7:15:130,15,0	1/1:0,25:25:71.99:625,72,0	1/1:4,24:29:74:628,74,0	1/1:2,20:22:50.99:443,51,0	1/1:0,7:8:23.59:192,24,0
chr10	54782898	.	TA	T	602.04	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=4.249;DP=564;FS=0.000;HRun=8;HaplotypeScore=120.5878;InbreedingCoeff=0.9286;MQ=72.30;MQ0=0;MQRankSum=-5.316;QD=22.30;ReadPosRankSum=-0.027;VQSLOD=2.4237;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:81.25:0,81,973	1/1:0,9:9:27.04:260,27,0	0/0:23,0:16:5.39:0,5,84	0/0:14,0:11:14.81:0,15,137	0/0:37,0:37:99:0,99,1184	0/0:17,0:17:48.13:0,48,567	0/0:10,0:10:24.07:0,24,281	0/0:24,0:24:63.18:0,63,751	0/0:9,0:9:24.07:0,24,290	0/0:22,0:22:60.18:0,60,725	0/0:28,0:28:78.24:0,78,940	0/0:17,0:17:51.13:0,51,595	0/0:15,0:15:36.10:0,36,423	0/0:10,0:10:27.08:0,27,317	0/0:24,0:24:57.17:0,57,689	1/1:2,16:18:48.08:463,48,0	0/0:25,0:25:72.22:0,72,870	0/0:24,0:24:60.13:0,60,707	0/0:28,0:28:78.23:0,78,934	0/0:27,0:27:69.20:0,69,823	0/0:8,0:8:21.06:0,21,254	0/0:21,0:21:57.17:0,57,688	0/0:20,0:20:45.14:0,45,544	0/0:8,0:8:24.07:0,24,290	0/0:32,0:32:81.23:0,81,956	0/0:28,0:28:78.22:0,78,923	0/0:24,0:24:56.94:0,57,642	0/0:10,0:10:27.08:0,27,326
chr10	54784999	.	GCATGATATA	G	32721.31	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=5.228;DP=508;FS=9.640;HRun=0;HaplotypeScore=187.1009;InbreedingCoeff=0.9238;MQ=84.30;MQ0=0;MQRankSum=-9.869;QD=71.60;ReadPosRankSum=6.011;VQSLOD=3.9941;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,27:29:75.26:2216,75,0	1/1:2,11:13:36.12:1004,36,0	0/0:23,0:24:5.76:0,6,2242	0/0:24,0:27:17.06:0,17,2166	1/1:4,14:18:39.05:915,39,0	1/1:2,9:11:24.08:689,24,0	1/1:4,17:21:51.17:1450,51,0	1/1:4,18:22:54.19:1631,54,0	1/1:2,19:21:48.16:1469,48,0	1/1:0,24:24:72.25:2192,72,0	1/1:0,7:7:18.06:461,18,0	1/1:0,11:11:27.09:837,27,0	1/1:4,16:20:51.18:1578,51,0	1/1:1,12:13:33.11:1022,33,0	1/1:0,24:24:66.23:1976,66,0	1/1:3,17:20:51.18:1577,51,0	1/1:7,18:25:42.14:1285,42,0	1/1:3,10:13:24.08:727,24,0	1/1:3,11:14:30.10:931,30,0	1/1:3,18:21:54.18:1465,54,0	1/1:3,12:15:24.08:693,24,0	1/1:1,9:10:27.09:781,27,0	1/1:1,13:14:33.11:1005,33,0	1/1:1,13:14:23.53:591,24,0	1/1:0,20:20:54.19:1620,54,0	1/1:1,17:18:51.17:1475,51,0	1/1:3,27:30:78.27:2416,78,0	1/1:1,8:9:24.08:716,24,0
chr10	54785000	.	CATGATAT	C	16574.33	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=7.581;DP=498;FS=6.569;HRun=0;HaplotypeScore=221.9707;InbreedingCoeff=0.9344;MQ=83.26;MQ0=0;MQRankSum=-10.080;QD=36.91;ReadPosRankSum=6.943;VQSLOD=3.4924;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:29:72.71:1121,73,0	1/1:11,1:12:31.05:494,31,0	0/0:23,0:23:7.01:0,7,2110	0/0:24,0:26:25.24:0,25,1825	1/1:17,0:17:28.03:405,28,0	1/1:11,0:11:21.54:343,22,0	1/1:20,1:21:46.09:716,46,0	1/1:21,0:21:53.21:837,53,0	1/1:20,0:20:48.16:765,48,0	1/1:24,0:24:71.46:1132,71,0	1/1:7,0:7:15.51:205,16,0	1/1:11,0:11:27.09:440,27,0	1/1:19,1:20:51.17:829,51,0	1/1:13,0:13:33.11:538,33,0	1/1:24,0:23:63.68:1013,64,0	1/1:20,0:20:51.17:828,51,0	1/1:24,1:25:42.14:669,42,0	1/1:12,0:12:24.08:374,24,0	1/1:13,0:13:30.10:489,30,0	1/1:21,0:21:51.07:678,51,0	1/1:14,0:14:24.07:340,24,0	1/1:9,0:9:24.55:392,25,0	1/1:14,0:14:33.11:520,33,0	1/1:14,0:14:18.68:258,19,0	1/1:20,0:20:54.17:826,54,0	1/1:18,0:18:45.35:725,45,0	1/1:28,2:29:78.27:1273,78,0	1/1:9,0:9:24.08:363,24,0
chr10	54788269	.	A	AT	811.05	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-5.370;DP=731;FS=1.638;HRun=7;HaplotypeScore=64.9913;InbreedingCoeff=0.9988;MQ=83.46;MQ0=0;MQRankSum=-3.956;QD=27.03;ReadPosRankSum=-0.424;VQSLOD=4.1709;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:96.13:0,96,921	0/0:15,0:15:45.06:0,45,429	0/0:24,0:24:57.06:0,57,538	0/0:19,0:19:44.75:0,45,386	0/0:40,0:40:99:0,102,973	0/0:30,0:30:84.13:0,84,811	0/0:23,0:23:66.08:0,66,630	0/0:33,0:33:87.10:0,87,832	0/0:21,0:21:57.09:0,57,551	0/0:33,0:33:93.14:0,93,895	0/0:32,0:32:84.12:0,84,810	0/0:19,0:19:54.09:0,54,521	1/1:3,27:30:75.23:906,75,0	0/0:34,0:34:87.09:0,87,823	0/0:24,0:24:66.09:0,66,632	0/0:30,0:30:87.14:0,87,840	0/0:23,0:23:69.11:0,69,666	0/0:16,0:16:42.01:0,42,396	0/0:25,0:25:60.07:0,60,575	0/0:32,0:32:87.13:0,87,840	0/0:20,0:20:54.08:0,54,521	0/0:23,0:23:66.11:0,66,637	0/0:29,0:29:72.09:0,72,690	0/0:14,0:14:39.01:0,39,362	0/0:27,0:27:75.12:0,75,724	0/0:39,0:39:99:0,108,1043	0/0:31,0:31:81.09:0,81,770	0/0:10,0:10:27.02:0,27,254
chr10	54788711	.	AG	A	20123.22	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=2.314;DP=675;FS=3.688;HRun=3;HaplotypeScore=112.1648;InbreedingCoeff=0.9988;MQ=86.61;MQ0=0;MQRankSum=-10.505;QD=32.09;ReadPosRankSum=7.195;VQSLOD=3.7855;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:1,42:43:99:1354,111,0	1/1:1,9:10:24.02:268,24,0	0/0:28,0:27:72.19:0,72,965	0/0:20,0:20:54.03:0,54,623	1/1:1,19:20:51.11:614,51,0	1/1:2,21:23:66.14:798,66,0	1/1:0,17:17:45.10:540,45,0	1/1:0,32:32:96.22:1105,96,0	1/1:0,15:15:39.12:483,39,0	1/1:0,24:24:69.16:794,69,0	1/1:1,32:33:90.28:1110,90,0	1/1:0,26:26:69.22:854,69,0	1/1:2,19:21:54.17:668,54,0	1/1:0,15:15:39.12:483,39,0	1/1:1,33:34:90.28:1114,90,0	1/1:2,21:23:45.14:557,45,0	1/1:0,27:27:63.20:780,63,0	1/1:0,22:22:57.18:706,57,0	1/1:1,26:27:58.47:852,58,0	1/1:0,20:20:60.11:707,60,0	1/1:0,38:38:99:1337,108,0	1/1:0,19:19:51.16:631,51,0	1/1:0,20:20:60.19:741,60,0	1/1:0,29:29:72.23:891,72,0	1/1:0,29:29:72.23:892,72,0	1/1:0,17:17:51.09:589,51,0	1/1:1,27:28:66.20:810,66,0	1/1:0,15:15:36.11:446,36,0
chr10	54788961	.	CCCACCCAAT	C	9473.37	PASS	AB=0.571;AC=15;AF=0.268;AN=56;BaseQRankSum=14.948;DP=635;FS=4.118;HRun=0;HaplotypeScore=208.1007;InbreedingCoeff=0.8969;MQ=78.09;MQ0=0;MQRankSum=-16.050;QD=56.73;ReadPosRankSum=-1.599;VQSLOD=4.4720;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,30:34:81.28:2364,81,0	0/0:8,0:8:21.07:0,21,971	0/0:18,0:18:42.14:0,42,1807	0/0:15,0:15:42.14:0,42,1813	0/0:29,0:29:81.28:0,81,3768	0/0:20,0:20:54.19:0,54,2513	0/0:20,0:20:54.17:0,54,2334	0/0:32,0:32:78.27:0,78,3330	0/0:20,0:20:57.20:0,57,2643	0/0:26,0:26:60.21:0,60,2719	0/0:27,0:27:75.24:0,75,3441	0/1:5,15:20:99:918,0,106	1/1:0,9:9:24.08:707,24,0	0/0:24,0:24:66.23:0,66,2900	0/0:32,0:32:81.28:0,81,3807	0/0:27,0:27:75.26:0,75,3416	1/1:8,10:18:30.10:865,30,0	1/1:6,16:22:45.15:1258,45,0	0/0:29,0:29:78.24:0,78,3204	0/0:22,0:22:54.19:0,54,2452	0/0:22,0:22:57.20:0,57,2617	1/1:2,12:14:36.12:1023,36,0	1/1:3,27:30:72.25:2073,72,0	1/1:8,12:20:8.95:264,9,0	0/0:33,0:33:96.33:0,96,4431	0/0:27,0:27:72.24:0,72,3266	0/0:27,0:27:78.27:0,78,3622	0/0:10,0:10:30.09:0,30,1307
chr10	54789748	.	AACACACACACACACACAC	A	10221.83	PASS	AB=1.000;AC=21;AF=0.389;AN=54;BaseQRankSum=3.341;DP=640;FS=10.548;HRun=0;HaplotypeScore=297.7548;InbreedingCoeff=0.8477;MQ=55.94;MQ0=13;MQRankSum=-4.073;QD=39.16;ReadPosRankSum=0.018;VQSLOD=2.3533;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:29:31.98:0,32,979	0/0:7,0:14:23.58:0,24,513	0/0:29,0:15:2.88:0,3,15	0/0:28,0:15:9.01:0,9,113	1/1:16,16:32:38.62:1197,39,0	1/1:10,13:23:15.05:712,15,0	1/1:9,8:16:3.01:140,3,0	0/1:24,0:22:3.34:72,0,3	1/1:9,16:27:45.15:2141,45,0	1/1:16,11:26:23.76:865,24,0	1/1:9,8:18:26.98:927,27,0	0/0:18,0:31:3.42:0,3,603	0/0:16,0:24:27.09:0,27,768	1/1:9,6:16:12.04:560,12,0	1/1:12,20:32:33.11:1593,33,0	0/0:12,0:19:14.46:0,14,231	0/0:15,0:23:37.37:0,37,925	0/0:22,0:23:36.12:0,36,988	0/0:13,0:17:30.20:0,30,1024	0/0:15,0:18:18.20:0,18,770	0/0:20,0:21:14.89:0,15,640	0/0:20,0:29:42.14:0,42,1276	0/0:10,0:18:21.99:0,22,521	0/0:21,0:26:30.07:0,30,684	1/1:6,16:22:24.08:1125,24,0	1/1:12,10:23:20.95:890,21,0	0/0:13,0:24:39.05:0,39,1287	./.
chr10	54790474	.	TTCCTTCG	T	1663.14	PASS	AB=0.963;AC=5;AF=0.089;AN=56;BaseQRankSum=7.486;DP=614;FS=0.000;HRun=0;HaplotypeScore=139.0996;InbreedingCoeff=0.7997;MQ=84.83;MQ0=0;MQRankSum=-8.050;QD=33.26;ReadPosRankSum=1.055;VQSLOD=3.2864;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,120,4722	1/1:0,5:5:12.04:323,12,0	0/0:26,0:26:75.26:0,75,2763	0/0:17,0:17:47.19:0,47,1499	0/0:26,0:26:78.27:0,78,3088	0/0:21,0:21:63.22:0,63,2424	0/0:32,0:32:90.31:0,90,3552	0/0:19,0:19:54.17:0,54,1953	0/0:24,0:24:69.24:0,69,2802	0/0:21,0:21:60.20:0,60,2438	0/0:14,0:14:39.13:0,39,1500	0/0:33,0:33:99:0,99,3912	0/0:23,0:23:69.22:0,69,2684	0/0:19,0:19:57.20:0,57,2258	0/1:25,1:26:5.55:6,0,2663	1/1:0,19:19:54.19:1455,54,0	0/0:21,0:21:63.20:0,63,2378	0/0:20,0:20:57.20:0,57,2238	0/0:18,0:18:54.16:0,54,1859	0/0:20,0:20:54.18:0,54,2124	0/0:19,0:19:54.17:0,54,2043	0/0:22,0:22:63.22:0,63,2443	0/0:27,0:27:81.28:0,81,3250	0/0:17,0:17:51.18:0,51,2071	0/0:24,0:24:72.25:0,72,2822	0/0:24,0:24:72.23:0,72,2827	0/0:31,0:31:90.31:0,90,3497	0/0:5,0:5:15.05:0,15,609
chr10	54791025	.	GGT	G	142.13	PASS	AB=0.965;AC=13;AF=0.283;AN=46;BaseQRankSum=0.538;DP=615;FS=0.000;HRun=0;HaplotypeScore=160.1637;InbreedingCoeff=-0.0629;MQ=59.12;MQ0=7;MQRankSum=-1.756;QD=0.57;ReadPosRankSum=-2.284;VQSLOD=1.6785;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,1:38:9.52:0,10,36	0/0:7,0:7:3:0,3,25	./.	0/0:29,0:18:0.47:0,0,1	./.	0/0:20,0:20:2.84:0,3,14	0/0:19,0:17:2.98:0,3,21	./.	0/1:20,0:20:8.21:12,0,8	0/0:20,0:20:2.60:0,3,10	./.	0/1:20,0:20:23.68:36,0,24	0/1:24,0:24:21.22:21,0,45	0/1:22,0:22:16.16:24,0,16	0/0:18,0:18:5.64:0,6,27	0/1:18,1:19:17.18:17,0,151	0/1:31,2:32:0.57:69,0,1	1/1:18,0:17:2.68:14,3,0	0/1:20,1:20:17.30:23,0,17	0/1:18,1:19:8.34:13,0,8	./.	0/0:19,0:18:4.82:0,5,17	0/1:21,3:22:0:0,0,0	1/1:26,3:29:3.01:32,3,0	0/0:25,0:24:2.84:0,3,14	0/0:26,0:26:5.10:0,5,23	0/0:23,0:23:5.60:0,6,26	0/0:7,0:6:2.80:0,3,13
chr10	54791046	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTC	G	5248.16	PASS	AB=0.913;AC=23;AF=0.411;AN=56;BaseQRankSum=8.017;DP=625;FS=18.083;HRun=0;HaplotypeScore=272.3546;InbreedingCoeff=0.4622;MQ=49.33;MQ0=28;MQRankSum=0.213;QD=17.73;ReadPosRankSum=2.971;VQSLOD=2.2474;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:40:67.14:0,67,2155	0/0:5,0:5:9.03:0,9,474	0/0:11,0:4:4.26:0,4,46	0/0:15,0:6:18.01:0,18,373	1/1:3,24:26:0.47:1,0,0	1/1:1,24:25:3.01:184,3,0	1/1:19,0:13:20.35:394,20,0	0/1:15,0:13:32.80:195,0,33	0/1:4,14:18:32.22:334,0,32	1/1:3,16:18:35.81:654,36,0	0/0:0,21:21:0.58:0,1,2	0/0:19,0:19:21.67:0,22,923	0/0:27,0:24:41.71:0,42,844	1/1:3,21:24:14.86:836,15,0	1/1:1,22:22:6.02:343,6,0	0/0:22,0:21:30.10:0,30,1423	0/0:37,0:36:26.06:0,26,490	0/0:23,0:20:29.97:0,30,714	0/1:24,0:22:37.64:466,0,38	0/1:20,0:20:14.45:168,0,14	0/0:23,0:21:14.40:0,14,110	0/0:21,0:19:24.08:0,24,680	0/0:24,0:22:18.06:0,18,551	0/0:40,0:38:18.04:0,18,351	1/1:2,23:24:3.01:180,3,0	1/1:0,30:30:72.35:1050,72,0	0/1:19,0:18:92.37:274,0,92	1/1:8,0:5:6.02:169,6,0
chr10	54791050	.	GTGTGTGTGTGTGTGTGTGTGTGTCTGTC	G	4477.19	PASS	AB=0.913;AC=25;AF=0.446;AN=56;BaseQRankSum=7.241;DP=620;FS=12.925;HRun=0;HaplotypeScore=264.4395;InbreedingCoeff=0.4633;MQ=48.73;MQ0=29;MQRankSum=-1.640;QD=14.08;ReadPosRankSum=3.438;VQSLOD=2.2588;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:47:71.89:0,72,1718	0/0:4,0:4:9.03:0,9,401	0/0:5,0:1:2.50:0,2,9	0/0:13,0:6:17.99:0,18,253	1/1:29,0:28:0.47:1,0,0	1/1:24,0:24:3.01:166,3,0	1/1:19,0:13:14.02:249,14,0	0/1:18,0:16:50:101,0,50	0/1:18,0:18:15.62:298,0,16	1/1:20,0:19:3.99:401,4,0	0/0:21,0:21:0.58:0,1,2	0/0:19,0:19:14.82:0,15,701	0/0:25,0:22:30.87:0,31,567	1/1:23,0:23:14.86:748,15,0	1/1:24,0:23:6.02:312,6,0	0/0:23,0:22:30.10:0,30,1186	0/0:35,0:34:9.67:0,10,315	0/0:24,0:21:19.94:0,20,502	1/1:8,16:22:27.82:808,28,0	1/1:3,16:19:6.49:210,6,0	0/1:21,0:19:5.34:50,0,5	0/0:22,0:20:24:0,24,490	0/0:24,0:22:18.06:0,18,408	0/0:38,0:36:14.64:0,15,222	1/1:24,0:22:3.01:162,3,0	0/1:31,0:31:9.04:516,0,9	0/1:4,14:17:7.25:323,0,7	1/1:6,0:3:6.02:132,6,0
chr10	54791062	.	GTGTGTGTGTGTCTGTCTGTC	G	3393.50	PASS	AB=1.000;AC=29;AF=0.537;AN=54;BaseQRankSum=3.904;DP=633;FS=15.071;HRun=0;HaplotypeScore=223.9657;InbreedingCoeff=-0.0810;MQ=49.09;MQ0=28;MQRankSum=-2.923;QD=6.71;ReadPosRankSum=4.261;VQSLOD=0.9863;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:50,0:48:96.60:872,0,97	0/0:4,0:4:6.02:0,6,160	./.	0/0:5,0:2:3.47:0,3,9	0/0:30,0:29:0:0,0,0	1/1:24,0:24:3.01:73,3,0	0/1:32,0:26:86.17:86,0,179	0/0:20,0:16:14.90:0,15,121	1/1:17,0:17:4.09:138,4,0	0/1:18,0:17:83.87:84,0,179	0/0:21,0:21:1.41:0,1,3	0/1:20,0:20:45.79:163,0,46	0/1:28,0:25:60.16:265,0,60	1/1:24,0:24:8.25:343,8,0	1/1:24,0:23:6.02:131,6,0	0/0:24,0:23:24.07:0,24,409	0/1:37,0:36:28.12:193,0,28	0/1:29,0:26:52.89:149,0,53	1/1:21,0:20:35.36:354,35,0	1/1:18,0:18:5.84:88,6,0	1/1:24,0:22:7.11:84,7,0	0/1:21,0:19:23:42,0,23	0/0:7,15:20:3:0,3,27	1/1:40,0:38:1.90:20,2,0	0/1:26,0:24:19.03:62,0,19	0/1:32,0:32:74.13:74,0,354	1/1:15,0:14:4.98:144,5,0	0/1:6,0:3:21.03:28,0,21
chr10	54791064	.	GTGTGTGTGTCTGTCTGTCTGTC	G	3418.33	PASS	AB=0.924;AC=30;AF=0.556;AN=54;BaseQRankSum=2.054;DP=633;FS=10.519;HRun=0;HaplotypeScore=235.7378;InbreedingCoeff=-0.0617;MQ=49.31;MQ0=28;MQRankSum=-4.214;QD=6.57;ReadPosRankSum=4.068;VQSLOD=0.6197;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:52,0:50:53.44:1266,0,53	0/0:4,0:4:6:0,6,186	./.	0/0:4,0:1:1.55:0,2,4	0/0:30,0:29:0.47:0,0,1	1/1:24,0:24:3.01:69,3,0	0/1:33,0:27:14.29:14,0,455	0/1:22,0:18:15.95:16,0,285	1/1:17,0:17:4.97:133,5,0	0/1:18,0:17:38.58:39,0,410	0/0:21,0:21:0.94:0,1,2	0/1:6,14:20:74.96:217,0,75	0/1:13,15:25:37.54:230,0,38	1/1:24,0:24:14.83:356,15,0	1/1:24,0:23:6.02:124,6,0	0/0:25,0:24:15.99:0,16,390	1/1:37,0:36:8.10:296,8,0	1/1:29,0:26:5.52:145,6,0	0/1:21,0:21:43.82:117,0,44	1/1:18,0:18:5.40:99,5,0	0/0:23,0:21:1.62:0,2,23	0/1:20,0:18:7.74:8,0,36	1/1:20,0:18:2.60:10,3,0	1/1:40,0:38:2.14:64,2,0	0/1:26,0:24:44:59,0,44	0/1:32,0:32:17.33:17,0,751	1/1:15,0:14:5.20:139,5,0	0/0:6,0:3:3.16:0,3,63
chr10	54791066	.	GTGTGTGTCTGTCTGTCTGTC	G	3541.79	PASS	AB=0.949;AC=31;AF=0.574;AN=54;BaseQRankSum=1.009;DP=629;FS=2.135;HRun=0;HaplotypeScore=222.4657;InbreedingCoeff=0.0341;MQ=49.46;MQ0=27;MQRankSum=-3.192;QD=7.08;ReadPosRankSum=3.920;VQSLOD=2.2799;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:48,0:47:60.44:1529,60,0	0/0:4,0:4:5.98:0,6,135	./.	0/0:3,0:1:3.01:0,3,115	0/0:30,0:29:0.47:0,0,1	1/1:24,0:24:3.01:55,3,0	0/1:33,0:27:20.75:21,0,498	0/1:22,0:18:15.95:16,0,285	1/1:17,0:17:4.93:106,5,0	0/1:18,0:17:27.22:27,0,401	0/0:21,0:21:1.41:0,1,3	1/1:19,1:20:4.66:267,5,0	0/1:26,1:24:0.37:314,0,0	1/1:24,0:24:2.73:269,3,0	1/1:24,0:23:6.02:96,6,0	0/0:26,0:25:20.56:0,21,221	0/1:9,28:37:3.04:261,0,3	1/1:9,19:26:2.57:168,3,0	0/1:21,0:21:37.91:100,0,38	1/1:18,0:18:4.22:53,4,0	0/0:26,0:24:2.97:0,3,25	1/1:17,0:16:5.67:43,6,0	0/0:19,0:17:2.60:0,3,10	1/1:11,28:37:3:33,3,0	0/1:26,0:24:44:45,0,44	0/1:32,0:32:19.81:20,0,740	1/1:15,0:14:5.46:111,5,0	0/1:7,0:4:6.96:7,0,107
chr10	54791070	.	GTGTCTGTC	G	1921.38	PASS	AB=1.000;AC=34;AF=0.708;AN=48;BaseQRankSum=0.785;DP=621;FS=13.945;HRun=0;HaplotypeScore=162.9765;InbreedingCoeff=0.1573;MQ=49.45;MQ0=27;MQRankSum=-1.118;QD=4.35;ReadPosRankSum=3.207;VQSLOD=2.0255;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:43,0:41:47.88:727,48,0	1/1:4,0:4:6.02:91,6,0	./.	0/0:4,0:2:6.02:0,6,105	0/0:30,0:29:0:0,0,0	1/1:24,0:24:2.22:7,2,0	0/1:33,0:29:14.26:45,0,14	0/0:24,0:20:3.66:0,4,19	1/1:17,0:17:3.72:11,4,0	0/1:18,0:17:11.03:30,0,11	0/0:21,0:21:0.47:0,0,1	0/1:19,0:19:22.11:27,0,22	1/1:25,0:22:3.18:41,3,0	1/1:24,0:24:7.29:93,7,0	1/1:24,0:23:2.03:4,2,0	./.	1/1:37,0:36:3.01:56,3,0	1/1:26,0:24:3.01:56,3,0	1/1:22,0:21:30.08:397,30,0	1/1:17,0:17:0.78:3,1,0	1/1:28,0:26:24.50:411,24,0	0/0:16,0:14:0:0,0,0	./.	./.	1/1:26,0:24:1.50:4,2,0	0/1:32,0:32:15.20:15,0,34	1/1:15,0:14:4.05:16,4,0	1/1:8,0:5:1.58:6,2,0
chr10	54791072	.	GTCTGTCTGTCTGTC	G	2110.17	PASS	AB=0.996;AC=25;AF=0.463;AN=54;BaseQRankSum=1.562;DP=618;FS=9.517;HRun=0;HaplotypeScore=185.9933;InbreedingCoeff=0.2391;MQ=49.39;MQ0=27;MQRankSum=-3.114;QD=5.11;ReadPosRankSum=5.038;VQSLOD=1.4698;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:43,0:41:4.88:1511,0,5	0/0:4,0:4:2.98:0,3,49	0/0:2,0:2:5.68:0,6,28	0/0:5,0:3:9.01:0,9,238	0/0:30,0:29:0.47:0,0,1	1/1:24,0:24:2.84:14,3,0	0/1:33,0:30:1:1,0,665	0/1:26,0:22:3.91:4,0,498	1/1:17,0:17:5.49:24,5,0	0/0:18,0:17:14.60:0,15,416	0/0:21,0:21:1.41:0,1,2	0/1:18,0:18:42.57:94,0,43	0/1:24,0:21:43.94:128,0,44	1/1:23,0:23:8.63:114,9,0	1/1:24,0:23:3.93:13,4,0	0/0:22,0:22:6.95:0,7,154	1/1:36,0:35:6.79:160,7,0	1/1:26,0:24:2.86:108,3,0	0/1:22,0:21:33.88:34,0,60	1/1:17,0:17:1.18:5,1,0	0/0:28,0:26:5.88:0,6,32	0/0:8,8:14:3.01:0,3,30	./.	1/1:38,0:36:2.97:21,3,0	0/1:26,0:24:3.62:4,0,45	0/0:32,0:32:39.65:0,40,812	1/1:15,0:14:4.88:28,5,0	0/0:8,0:5:15.04:0,15,199
chr10	54791560	.	TG	T	8950.28	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=7.525;DP=606;FS=7.108;HRun=5;HaplotypeScore=64.6120;InbreedingCoeff=0.9990;MQ=88.43;MQ0=0;MQRankSum=-4.630;QD=29.54;ReadPosRankSum=2.743;VQSLOD=5.3776;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,108,1455	0/0:7,0:7:21.04:0,21,268	0/0:34,0:34:99:0,99,1279	0/0:22,0:21:59.75:0,60,748	1/1:1,9:10:27.04:292,27,0	1/1:0,22:22:63.18:714,63,0	1/1:1,18:19:54.15:612,54,0	1/1:1,24:25:69.17:764,69,0	1/1:6,19:25:54.15:612,54,0	1/1:0,14:14:42.10:465,42,0	1/1:2,12:14:36.02:391,36,0	0/0:32,0:32:93.27:0,93,1217	0/0:33,0:33:84.25:0,84,1114	1/1:0,19:20:44.16:482,44,0	1/1:1,21:22:57.16:646,57,0	0/0:30,0:30:84.24:0,84,1101	0/0:27,0:27:78.23:0,78,1033	0/0:25,0:25:69.19:0,69,919	1/1:0,14:14:39.09:429,39,0	1/1:0,10:10:27.01:290,27,0	1/1:0,20:20:51.15:578,51,0	0/0:16,0:16:42.11:0,42,542	0/0:13,0:13:36.08:0,36,471	0/0:26,0:26:75.25:0,75,1025	1/1:0,13:13:36.10:408,36,0	1/1:0,25:25:75.20:839,75,0	1/1:0,33:33:90.09:1020,90,0	1/1:3,14:17:36.10:408,36,0
chr10	54792910	.	CTGAGGTGA	C	3074.87	PASS	AB=0.519;AC=3;AF=0.054;AN=56;BaseQRankSum=9.841;DP=773;FS=1.309;HRun=0;HaplotypeScore=189.5307;InbreedingCoeff=0.6478;MQ=83.42;MQ0=0;MQRankSum=-9.778;QD=68.33;ReadPosRankSum=2.036;VQSLOD=3.3529;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:84.29:0,84,3651	1/1:2,16:18:42.13:1191,42,0	0/0:29,0:29:84.29:0,84,3387	0/0:20,0:19:57.19:0,57,2173	0/0:26,0:26:75.24:0,75,3216	0/0:32,0:32:96.33:0,96,4214	0/0:18,0:18:54.17:0,54,2216	0/0:29,0:29:75.26:0,75,3250	0/0:20,0:20:57.18:0,57,2438	0/0:27,0:27:78.26:0,78,3280	0/0:22,0:22:63.22:0,63,2614	0/0:32,0:32:96.33:0,96,4230	0/0:49,0:49:99:0,141,6022	0/0:23,0:23:66.23:0,66,2883	0/0:37,0:37:99:0,108,4511	0/1:2,25:27:58.94:1990,0,59	0/0:27,0:27:74.85:0,75,3138	0/0:18,0:18:54.19:0,54,2326	0/0:22,0:22:63.22:0,63,2488	0/0:34,0:34:96.33:0,96,4212	0/0:30,0:30:84.25:0,84,3412	0/0:30,0:30:81.28:0,81,3600	0/0:37,0:37:99:0,111,4858	0/0:19,0:19:57.20:0,57,2438	0/0:32,0:32:96.31:0,96,4107	0/0:30,0:30:90.31:0,90,3891	0/0:41,0:41:99:0,117,5095	0/0:15,0:15:45.15:0,45,1949
chr10	54794357	.	GA	G	377.34	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=3.855;DP=685;FS=9.757;HRun=1;HaplotypeScore=103.2494;InbreedingCoeff=0.9951;MQ=71.71;MQ0=0;MQRankSum=-3.785;QD=10.48;ReadPosRankSum=1.096;VQSLOD=0.8436;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:93.02:0,93,536	1/1:4,7:12:23.76:167,24,0	0/0:16,1:16:41.83:0,42,479	0/0:19,0:18:44.27:0,44,439	0/0:41,0:41:99:0,113,1371	0/0:31,0:31:88.11:0,88,1147	0/0:33,0:33:87.21:0,87,1209	0/0:28,0:28:79.97:0,80,1061	0/0:17,0:17:47.88:0,48,606	0/0:27,0:27:78.16:0,78,1065	0/0:24,0:24:66.23:0,66,827	0/0:29,0:29:75.90:0,76,476	0/0:32,0:32:78.71:0,79,494	0/0:18,0:18:50.11:0,50,689	0/0:28,0:28:73.99:0,74,1000	1/1:8,15:24:49.67:332,50,0	0/0:11,0:11:32.03:0,32,188	0/0:20,0:20:56.16:0,56,343	0/0:21,0:21:20.85:0,21,246	0/0:33,0:33:31.31:0,31,285	0/0:15,0:15:25.86:0,26,157	0/0:17,0:17:42.15:0,42,252	0/0:22,0:22:42.78:0,43,261	0/0:24,0:24:62.89:0,63,357	0/0:37,0:37:98.72:0,99,1426	0/0:26,1:27:39.73:0,40,798	0/0:24,0:24:28.41:0,28,180	0/0:15,0:14:39:0,39,490
chr10	54794358	.	ATT	A	3796.70	PASS	AB=0.778;AC=18;AF=0.321;AN=56;BaseQRankSum=4.122;DP=693;FS=0.000;HRun=14;HaplotypeScore=102.6907;InbreedingCoeff=0.8388;MQ=70.81;MQ0=1;MQRankSum=-2.196;QD=17.50;ReadPosRankSum=6.571;VQSLOD=2.7410;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,29:38:80.43:718,80,0	0/1:12,0:12:5.20:5,0,40	0/0:17,0:17:35.93:0,36,411	0/0:20,0:18:33.64:0,34,316	0/0:32,0:40:95.77:0,96,1236	0/0:28,0:30:71.70:0,72,932	0/0:33,0:34:86.09:0,86,1159	0/0:26,1:30:43.94:0,44,872	0/0:16,0:18:47.06:0,47,565	0/0:28,0:30:78.23:0,78,1045	0/0:22,0:24:62.15:0,62,777	1/1:4,23:28:62.76:567,63,0	1/1:9,23:32:56.74:512,57,0	0/0:17,0:19:53.09:0,53,651	0/0:28,0:30:80.73:0,81,1052	0/0:26,0:26:19.69:0,20,153	1/1:0,10:10:30.03:278,30,0	1/1:3,17:20:51.01:465,51,0	0/0:7,0:20:33.14:0,33,149	0/0:9,2:32:6.91:0,7,217	0/1:3,4:15:30.84:82,0,31	1/1:2,15:17:38.99:361,39,0	1/1:2,18:21:34.28:315,34,0	1/1:5,17:24:56.53:496,57,0	0/0:32,0:37:99:0,107,1376	0/0:24,0:27:58.63:0,59,707	0/0:5,1:24:17.66:0,18,119	0/0:17,0:16:39.09:0,39,509
chr10	54795902	.	G	GA	4630.56	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-10.786;DP=680;FS=4.701;HRun=9;HaplotypeScore=67.5008;InbreedingCoeff=0.9901;MQ=79.79;MQ0=0;MQRankSum=-2.410;QD=23.87;ReadPosRankSum=2.606;VQSLOD=5.8806;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,27:33:45.87:713,46,0	0/0:15,0:16:38.03:0,38,318	0/0:21,0:22:52.84:0,53,436	0/0:15,0:14:13.36:0,13,196	0/0:29,0:29:77.97:0,78,677	0/0:28,0:29:82.99:0,83,704	0/0:11,0:11:29.99:0,30,260	0/0:43,0:44:81.99:0,82,838	0/0:20,0:20:36.53:0,37,471	0/0:29,0:29:74.96:0,75,649	0/0:29,1:30:44.81:0,45,614	1/1:3,23:26:63.14:685,63,0	1/1:2,25:27:63.17:697,63,0	0/0:18,0:18:47.99:0,48,417	0/0:36,0:36:95.93:0,96,824	0/0:18,0:18:50.99:0,51,443	1/1:5,17:22:16.06:405,16,0	1/1:1,6:7:15.04:166,15,0	0/0:21,0:21:44.96:0,45,391	0/0:24,0:24:62.98:0,63,546	0/0:22,0:22:62.98:0,63,544	1/1:1,18:19:51.14:564,51,0	1/1:5,33:38:87.24:962,87,0	1/1:6,16:22:19.07:438,19,0	0/0:24,0:24:65.98:0,66,573	0/0:26,1:27:29.78:0,30,488	0/0:35,0:35:95.98:0,96,833	0/0:16,0:16:44.98:0,45,391
chr10	54796413	.	G	GC	1846.03	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=4.851;DP=749;FS=0.000;HRun=4;HaplotypeScore=81.4041;InbreedingCoeff=0.9976;MQ=76.99;MQ0=0;MQRankSum=-2.392;QD=34.83;ReadPosRankSum=0.914;VQSLOD=4.0089;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,108,1224	1/1:2,10:12:30.10:409,30,0	0/0:26,0:26:67.72:0,68,770	0/0:19,0:19:45.11:0,45,501	0/0:17,0:17:51.13:0,51,569	0/0:35,0:35:99:0,102,1136	0/0:26,0:26:66.19:0,66,748	0/0:26,0:25:75.19:0,75,832	0/0:20,0:20:57.16:0,57,646	0/0:32,0:32:93.26:0,93,1045	0/0:28,0:28:77.03:0,77,854	0/0:33,0:33:90.26:0,90,1020	0/0:28,0:28:75.21:0,75,850	0/0:32,0:32:93.25:0,93,1042	0/0:31,0:31:87.25:0,87,986	1/1:1,40:41:99:1559,114,0	0/0:34,0:34:96.23:0,96,1066	0/0:23,0:23:63.14:0,63,700	0/0:18,0:18:48.13:0,48,544	0/0:29,0:29:81.23:0,81,911	0/0:47,0:47:99:0,132,1478	0/0:22,0:22:63.15:0,63,695	0/0:22,0:22:66.16:0,66,731	0/0:22,0:22:63.18:0,63,714	0/0:25,0:25:75.20:0,75,839	0/0:25,0:25:72.20:0,72,808	0/0:29,0:28:81.23:0,81,918	0/0:7,0:7:21.06:0,21,238
chr10	54797288	.	TA	T	4255.11	PASS	AB=0.622;AC=51;AF=0.911;AN=56;BaseQRankSum=-2.520;DP=577;FS=14.470;HRun=14;HaplotypeScore=81.4152;InbreedingCoeff=0.6202;MQ=78.64;MQ0=1;MQRankSum=-1.994;QD=8.07;ReadPosRankSum=6.388;VQSLOD=2.1174;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,14:22:39.86:232,40,0	1/1:4,3:7:8.84:61,9,0	0/0:30,0:25:25.01:0,25,229	0/0:18,0:14:14.41:0,14,117	1/1:6,1:31:45.96:149,46,0	1/1:2,0:13:22.40:65,22,0	1/1:5,1:23:29.43:97,29,0	1/1:4,0:27:40.86:124,41,0	1/1:2,0:9:12.15:35,12,0	1/1:6,0:20:30.03:86,30,0	1/1:5,0:15:20.36:65,20,0	1/1:6,16:22:17.93:191,18,0	0/1:10,17:28:7.24:290,0,7	1/1:3,0:16:24.43:71,24,0	1/1:4,0:25:38.19:110,38,0	1/1:8,12:21:40.62:273,41,0	1/1:4,24:30:49.27:437,49,0	1/1:4,14:18:32.96:216,33,0	1/1:13,9:22:0.61:152,1,0	1/1:9,16:25:19.38:266,19,0	1/1:4,16:20:38.65:267,39,0	1/1:4,7:11:17.81:123,18,0	1/1:8,10:20:1.87:154,2,0	1/1:5,16:22:19.38:249,19,0	1/1:1,0:21:32.58:95,33,0	1/1:5,0:21:31.84:101,32,0	1/1:6,20:26:22.65:301,23,0	1/1:3,0:11:16.28:47,16,0
chr10	54800779	.	TA	T	3941.12	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=0.888;DP=682;FS=0.854;HRun=1;HaplotypeScore=92.8542;InbreedingCoeff=1.0000;MQ=83.19;MQ0=1;MQRankSum=-0.400;QD=39.02;ReadPosRankSum=2.306;VQSLOD=4.1315;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:90.31:0,90,1434	0/0:13,0:13:39.13:0,39,621	0/0:26,0:26:75.72:0,76,1177	0/0:24,0:24:63.08:0,63,944	0/0:32,0:32:93.32:0,93,1474	0/0:24,0:24:69.24:0,69,1102	0/0:23,0:23:66.22:0,66,1043	0/0:31,0:31:93.32:0,93,1479	0/0:17,0:17:48.15:0,48,742	0/0:22,0:22:66.23:0,66,1053	0/0:22,0:22:66.21:0,66,1032	0/0:25,0:25:69.24:0,69,1100	0/0:32,0:32:90.29:0,90,1413	0/0:25,0:25:72.25:0,72,1150	0/0:23,0:23:69.22:0,69,1075	0/0:18,0:18:51.17:0,51,814	0/0:23,0:23:66.22:0,66,1051	0/0:27,0:27:75.26:0,75,1199	1/1:0,21:20:60.20:838,60,0	1/1:0,29:29:84.28:1174,84,0	1/1:0,21:21:51.17:713,51,0	0/0:25,0:25:72.25:0,72,1148	0/0:22,0:22:63.20:0,63,983	0/0:18,0:18:51.15:0,51,790	0/0:28,0:28:84.29:0,84,1339	0/0:33,0:33:99:0,99,1581	1/1:0,30:30:87.29:1216,87,0	0/0:16,0:16:45.15:0,45,717
chr10	54800813	.	AT	A	4393.40	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=9.428;DP=617;FS=8.461;HRun=10;HaplotypeScore=83.9448;InbreedingCoeff=0.9377;MQ=67.62;MQ0=0;MQRankSum=1.796;QD=20.63;ReadPosRankSum=4.058;VQSLOD=5.4661;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,25:26:71.98:625,72,0	1/1:7,0:7:7.48:20,7,0	0/0:17,0:17:16.12:0,16,179	0/1:7,0:6:0.98:1,0,46	0/0:34,1:35:73.17:0,73,1022	0/0:25,0:25:63.17:0,63,696	0/0:15,1:16:22.04:0,22,458	0/0:39,0:40:97.51:0,98,1065	0/0:14,0:14:42.11:0,42,463	0/0:14,0:14:42.11:0,42,465	0/0:22,0:22:60.16:0,60,662	1/1:2,22:24:53.98:469,54,0	1/1:1,26:27:68.97:598,69,0	0/0:20,1:21:28.07:0,28,528	0/0:23,0:24:56.99:0,57,611	1/1:10,0:10:11.34:31,11,0	1/1:1,20:21:56.99:495,57,0	1/1:0,27:27:74.98:651,75,0	0/0:14,0:14:39.10:0,39,426	0/0:32,0:32:90.24:0,90,995	0/0:15,0:15:30.01:0,30,314	1/1:2,22:24:62.98:546,63,0	1/1:0,24:24:68.97:595,69,0	1/1:0,16:16:41.99:364,42,0	0/0:25,0:25:66.17:0,66,723	0/0:37,0:37:99:0,105,1152	0/0:32,0:32:81.20:0,81,887	0/0:20,0:20:54.12:0,54,583
chr10	54800818	.	TTTTTTG	T	576.09	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.504;DP=609;FS=28.173;HRun=0;HaplotypeScore=156.1190;InbreedingCoeff=0.9766;MQ=63.49;MQ0=1;MQRankSum=-5.600;QD=48.01;ReadPosRankSum=0.546;VQSLOD=1.7084;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:75.26:0,75,1763	1/1:0,5:5:14.97:286,15,0	0/0:14,0:12:30.10:0,30,717	0/0:6,0:5:13.86:0,14,347	0/0:38,0:38:99:0,114,3837	0/0:22,0:22:66.23:0,66,2425	0/0:16,0:16:48.16:0,48,1728	0/0:38,0:38:99:0,114,3891	0/0:15,0:15:45.15:0,45,1632	0/0:16,0:16:48.16:0,48,1656	0/0:22,0:22:66.23:0,66,2327	0/0:24,0:24:63.20:0,63,1454	0/0:27,0:27:81.28:0,81,1944	0/0:22,0:22:66.23:0,66,2224	0/0:22,0:22:66.23:0,66,2329	1/1:1,6:7:18.06:406,18,0	0/0:20,0:20:57.20:0,57,1383	0/0:27,0:27:78.27:0,78,1897	0/0:17,0:17:51.16:0,51,1661	0/0:32,0:32:96.33:0,96,3479	0/0:15,0:15:39.12:0,39,1253	0/0:23,0:23:66.23:0,66,1568	0/0:27,0:27:81.11:0,81,1868	0/0:16,0:16:45.15:0,45,1072	0/0:26,0:26:78.27:0,78,2730	0/0:37,0:37:99:0,111,4006	0/0:31,0:31:90.29:0,90,3135	0/0:18,0:18:54.19:0,54,1948
chr10	54801658	.	TA	T	2619.55	PASS	AC=42;AF=1.000;AN=42;DP=466;FS=0.000;HRun=10;HaplotypeScore=21.0768;InbreedingCoeff=-0.0386;MQ=30.81;MQ0=166;QD=6.13;VQSLOD=-0.7152;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,25:23:29.98:260,30,0	./.	./.	./.	1/1:6,16:9:11.98:104,12,0	1/1:3,18:14:17.99:156,18,0	1/1:5,7:5:3:26,3,0	1/1:19,20:3:8.98:74,9,0	1/1:6,11:10:8.99:78,9,0	1/1:3,14:13:29.99:260,30,0	1/1:7,11:8:2.98:26,3,0	1/1:5,15:12:14.99:130,15,0	1/1:7,11:14:14.99:130,15,0	1/1:2,19:12:12:104,12,0	1/1:1,19:14:21:182,21,0	./.	1/1:8,17:17:14.99:130,15,0	1/1:3,13:14:21:182,21,0	1/1:8,5:5:9:78,9,0	1/1:3,13:7:8.99:78,9,0	1/1:5,5:3:3:26,3,0	./.	./.	./.	1/1:6,15:8:11.99:104,12,0	1/1:7,18:13:29.84:246,30,0	1/1:4,22:16:18:156,18,0	1/1:3,10:11:20.36:164,20,0
chr10	54802284	.	CA	C	1405.85	PASS	AB=0.976;AC=31;AF=0.738;AN=42;BaseQRankSum=4.056;DP=391;FS=3.344;HRun=1;HaplotypeScore=51.3006;InbreedingCoeff=0.4125;MQ=44.58;MQ0=84;MQRankSum=1.502;QD=4.12;ReadPosRankSum=4.829;VQSLOD=0.7034;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:10,0:6:18.09:18,0,76	./.	0/0:20,0:2:6.02:0,6,86	./.	1/1:15,0:15:27.68:124,28,0	1/1:20,0:13:22.78:94,23,0	1/1:20,0:12:3.80:49,4,0	0/1:35,0:28:25.64:26,0,111	1/1:14,0:7:14.39:59,14,0	1/1:16,0:16:18.29:60,18,0	1/1:12,0:12:21.30:82,21,0	0/0:2,0:1:2.96:0,3,19	./.	1/1:17,0:8:16.86:69,17,0	1/1:21,0:10:20.92:74,21,0	./.	./.	0/0:2,0:1:0:0,0,0	1/1:15,1:11:14.15:53,14,0	1/1:22,0:20:36.56:135,37,0	1/1:37,1:37:42.24:168,42,0	./.	./.	0/0:3,0:2:6.02:0,6,85	1/1:21,0:19:43.65:180,44,0	0/1:24,2:19:7.24:118,0,7	1/1:11,0:7:16.25:58,16,0	1/1:27,0:24:49.80:170,50,0
chr10	54802285	.	AC	A	6250.39	PASS	AB=0.909;AC=33;AF=0.868;AN=38;BaseQRankSum=0.086;DP=389;FS=3.819;HRun=8;HaplotypeScore=32.9639;InbreedingCoeff=0.6496;MQ=44.76;MQ0=83;MQRankSum=-1.951;QD=18.33;ReadPosRankSum=2.078;VQSLOD=4.1498;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:8,1:6:19.89:20,0,63	./.	0/0:20,0:2:6.02:0,6,72	./.	1/1:0,15:15:33.05:318,33,0	1/1:3,17:13:33.05:318,33,0	1/1:5,15:12:24.04:232,24,0	1/1:12,21:28:59.10:550,59,0	1/1:1,13:7:18.03:173,18,0	1/1:0,16:16:45.07:435,45,0	1/1:2,10:12:27.04:261,27,0	./.	./.	1/1:1,16:8:21.03:203,21,0	1/1:3,18:10:30.05:290,30,0	./.	./.	./.	1/1:4,12:11:30.05:289,30,0	1/1:7,16:21:45.07:435,45,0	1/1:5,31:36:89.18:846,89,0	./.	./.	0/0:2,0:2:6.02:0,6,72	1/1:2,19:19:51.08:492,51,0	1/1:7,18:19:51.08:492,51,0	1/1:0,11:7:21.03:203,21,0	1/1:3,24:24:72.12:695,72,0
chr10	54803111	.	T	TGTG	589.40	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.621;DP=652;FS=21.131;HRun=0;HaplotypeScore=101.2548;InbreedingCoeff=0.9685;MQ=77.11;MQ0=0;MQRankSum=-6.615;QD=36.84;ReadPosRankSum=2.547;VQSLOD=2.8729;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,129,2366	1/1:1,2:3:8.99:103,9,0	0/0:13,0:13:33.11:0,33,615	0/0:19,0:18:51:0,51,755	0/0:28,0:28:75.26:0,75,1395	0/0:22,0:22:63.20:0,63,1129	0/0:25,0:25:72.21:0,72,1269	0/0:32,0:32:93.29:0,93,1665	0/0:18,0:18:54.19:0,54,1004	0/0:33,0:33:96.32:0,96,1760	0/0:28,0:28:75.24:0,75,1364	0/0:21,0:21:63.19:0,63,1111	0/0:18,0:18:54.17:0,54,973	0/0:15,0:15:45.15:0,45,834	0/0:16,0:16:48.16:0,48,894	1/1:2,11:13:36.09:600,36,0	0/0:47,0:47:99:0,141,2557	0/0:25,0:25:72.25:0,72,1323	0/0:18,0:18:54.16:0,54,939	0/0:35,0:35:99:0,102,1832	0/0:15,0:15:39.12:0,39,686	0/0:11,0:11:30.10:0,30,558	0/0:34,0:34:96.31:0,96,1753	0/0:18,0:18:54.19:0,54,1005	0/0:25,0:25:63.22:0,63,1172	0/0:24,0:24:72.12:0,72,1242	0/0:24,0:24:72.25:0,72,1340	0/0:27,0:27:81.28:0,81,1461
chr10	54803112	.	A	ATAGATTAGACCCTCT	3828.72	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.322;DP=658;FS=32.497;HRun=0;HaplotypeScore=259.9486;InbreedingCoeff=0.9837;MQ=76.21;MQ0=0;MQRankSum=-7.922;QD=166.47;ReadPosRankSum=1.386;VQSLOD=2.6688;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,132,5689	1/1:3,2:5:12.04:578,12,0	0/0:13,0:13:39.09:0,39,1452	0/0:18,0:17:39.13:0,39,1276	0/0:28,0:28:75.26:0,75,3150	0/0:22,0:22:63.22:0,63,2418	0/0:25,0:25:72.23:0,72,2811	0/0:33,0:33:90.30:0,90,3659	0/0:18,0:18:54.19:0,54,2276	0/0:34,0:34:99:0,99,4203	0/0:27,0:27:75.26:0,75,3243	0/0:22,0:22:63.22:0,63,2639	0/0:18,0:18:51.17:0,51,2201	0/0:15,0:15:45.15:0,45,1985	0/0:16,0:16:48.16:0,48,2142	1/1:7,11:18:54.19:3251,54,0	0/0:46,0:46:99:0,138,5999	0/0:25,0:25:72.25:0,72,2927	0/0:18,0:18:54.18:0,54,2059	0/0:35,0:35:99:0,102,4302	0/0:15,0:15:45.12:0,45,1661	0/0:11,0:11:33.09:0,33,1375	0/0:34,0:34:93.32:0,93,3965	0/0:18,0:18:54.19:0,54,2391	0/0:24,0:24:66.22:0,66,2669	0/0:24,0:24:69.24:0,69,2866	0/0:24,0:24:72.25:0,72,3118	0/0:27,0:27:81.28:0,81,3349
chr10	54804069	.	GTAC	G	10901.86	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=20.278;DP=834;FS=5.746;HRun=0;HaplotypeScore=150.8237;InbreedingCoeff=0.9998;MQ=86.11;MQ0=0;MQRankSum=-5.828;QD=40.38;ReadPosRankSum=3.864;VQSLOD=6.2488;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,39:39:99:1553,99,0	0/0:18,0:18:54.17:0,54,1171	0/0:30,0:30:82.11:0,82,1736	0/0:29,0:29:78.27:0,78,1662	0/0:33,0:33:90.29:0,90,2026	0/0:21,0:21:63.22:0,63,1427	0/0:18,0:18:54.19:0,54,1218	0/0:30,0:30:84.29:0,84,1879	0/0:35,0:35:99:0,102,2323	0/0:38,0:38:99:0,108,2401	0/0:27,0:27:69.22:0,69,1512	1/1:1,41:42:99:1956,120,0	1/1:3,25:28:66.22:1066,66,0	0/0:29,0:29:87.30:0,87,1979	0/0:38,0:38:99:0,114,2586	0/0:35,0:35:99:0,105,2401	1/1:1,43:44:99:1829,114,0	1/1:4,19:23:57.15:930,57,0	0/0:25,0:25:66.21:0,66,1415	0/0:27,0:27:78.27:0,78,1755	0/0:43,0:43:99:0,129,2816	1/1:2,34:36:89.92:1339,90,0	1/1:0,28:28:71.12:1109,71,0	1/1:1,29:30:69.53:1121,70,0	0/0:16,0:16:48.16:0,48,1066	0/0:27,0:27:81.28:0,81,1852	0/0:36,0:36:99:0,108,2424	0/0:9,0:9:27.09:0,27,623
chr10	54806718	.	A	ATGTGTC	14805.08	PASS	AB=0.535;AC=45;AF=0.833;AN=54;BaseQRankSum=-3.779;DP=1107;FS=0.000;HRun=0;HaplotypeScore=274.7814;InbreedingCoeff=0.4927;MQ=51.24;MQ0=12;MQRankSum=1.207;QD=15.20;ReadPosRankSum=3.155;VQSLOD=3.4597;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,18:34:2.07:13,2,0	1/1:18,0:18:25.15:539,25,0	0/0:52,0:20:41.88:0,42,581	0/0:61,0:17:22.07:0,22,310	0/1:3,30:36:0.09:0,0,0	1/1:3,15:20:9.02:204,9,0	1/1:8,31:39:2.94:101,3,0	1/1:9,27:38:84.12:1345,84,0	1/1:7,34:44:16.86:461,17,0	1/1:4,31:38:99:2221,99,0	./.	0/1:6,45:56:26.59:562,0,27	1/1:7,39:53:32.99:1100,33,0	1/1:4,48:54:8.45:156,8,0	1/1:3,44:48:8.97:245,9,0	1/1:36,0:36:60.20:875,60,0	1/1:7,22:31:20.49:628,20,0	1/1:8,15:24:10.22:514,10,0	1/1:7,12:23:50.27:692,50,0	1/1:2,28:32:2.90:71,3,0	1/1:17,62:85:8.13:93,8,0	0/1:6,40:48:0:1,0,0	0/1:8,24:35:0:0,0,0	1/1:21,39:64:9.02:128,9,0	0/1:3,27:31:0.01:0,0,0	1/1:5,44:52:99:3627,138,0	1/1:5,20:27:36.06:1127,36,0	1/1:1,3:5:3.01:102,3,0
chr10	54806726	.	G	GTGTC	9641.61	PASS	AB=0.984;AC=22;AF=0.393;AN=56;BaseQRankSum=3.073;DP=1121;FS=4.372;HRun=0;HaplotypeScore=273.1823;InbreedingCoeff=-0.4193;MQ=50.60;MQ0=19;MQRankSum=-5.968;QD=12.13;ReadPosRankSum=10.915;VQSLOD=2.3909;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:40:12.62:0,13,307	1/1:1,17:20:25.15:1035,25,0	0/0:63,0:22:51.37:0,51,791	0/0:64,0:17:31.29:0,31,369	0/0:32,0:32:3.46:0,3,26	0/1:23,0:24:64.71:119,0,65	0/1:38,0:38:53.36:53,0,106	0/1:39,0:39:99:544,0,412	0/1:44,1:45:86.41:298,0,86	0/1:37,0:37:99:1083,0,133	0/0:20,0:20:3.01:0,3,47	0/1:53,0:53:99:296,0,124	0/1:54,0:54:99:533,0,294	0/1:58,0:58:99:112,0,225	0/1:48,0:48:57.29:95,0,57	1/1:1,36:39:63.15:1635,63,0	0/1:28,0:28:28.16:289,0,28	0/1:22,2:25:53.84:294,0,54	0/1:20,0:19:99:321,0,190	0/1:33,0:33:37.25:37,0,177	0/1:84,2:86:99:136,0,313	0/0:45,0:45:8.59:0,9,119	0/0:29,0:30:2.78:0,3,25	0/1:59,3:62:99:219,0,187	0/0:31,0:31:6:0,6,74	0/1:56,0:55:99:1923,0,366	0/1:24,0:24:66.55:571,0,67	0/1:5,0:5:14.96:46,0,15
chr10	54806901	.	CAT	C	1197	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=4.781;DP=1132;FS=1.361;HRun=0;HaplotypeScore=188.0302;InbreedingCoeff=0.9918;MQ=55.73;MQ0=12;MQRankSum=2.727;QD=31.50;ReadPosRankSum=0.505;VQSLOD=4.8545;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,117,1983	1/1:0,7:5:15.05:220,15,0	0/0:52,0:20:53.54:0,54,909	0/0:42,0:21:53.50:0,53,815	0/0:30,0:30:84.27:0,84,1519	0/0:37,0:37:84.29:0,84,1572	0/0:41,0:41:86.20:0,86,1630	0/0:51,0:51:99:0,147,2609	0/0:46,0:46:99:0,105,1915	0/0:37,0:37:99:0,111,2025	0/0:27,0:27:78.25:0,78,1428	0/0:62,0:62:99:0,138,2377	0/0:60,0:60:99:0,144,2537	0/0:56,0:56:99:0,120,2154	0/0:59,0:59:99:0,108,1939	1/1:10,21:30:81.20:1095,81,0	0/0:43,0:43:99:0,126,2168	0/0:31,0:31:93.24:0,93,1658	0/0:22,0:21:52.52:0,53,1043	0/0:28,0:28:78.27:0,78,1432	0/0:82,0:81:99:0,229,4056	0/0:40,0:40:99:0,117,2087	0/0:18,0:18:48.13:0,48,813	0/0:68,0:69:99:0,145,2807	0/0:22,0:21:66.11:0,66,1145	0/0:40,0:40:99:0,111,1907	0/0:39,0:38:99:0,111,1996	0/0:16,0:16:48.15:0,48,857
chr10	54809072	.	GA	G	3648.36	PASS	AB=0.654;AC=21;AF=0.375;AN=56;BaseQRankSum=-3.133;DP=610;FS=0.000;HRun=13;HaplotypeScore=81.4348;InbreedingCoeff=0.6267;MQ=68.49;MQ0=3;MQRankSum=-0.002;QD=12.08;ReadPosRankSum=2.235;VQSLOD=3.7255;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:2,0:18:37.26:0,37,215	0/0:6,0:7:14.86:0,15,131	0/1:31,1:17:9.33:9,0,109	0/0:22,0:14:23.08:0,23,164	1/1:2,38:40:69.06:662,69,0	0/1:4,12:17:6.12:206,0,6	0/1:4,13:19:15.87:210,0,16	0/1:6,15:21:7.73:271,0,8	1/1:4,13:17:8.66:217,9,0	1/1:5,18:24:26.29:348,26,0	1/1:5,20:25:21.42:321,21,0	0/0:3,1:20:18.30:0,18,183	0/0:5,0:15:22.88:0,23,124	1/1:4,14:18:38.75:284,39,0	1/1:5,21:28:14.31:413,14,0	0/0:23,2:26:25.06:0,25,543	0/0:6,0:32:59.70:0,60,343	0/0:8,0:29:59.54:0,60,321	0/0:10,0:10:17.85:0,18,153	0/0:23,1:26:22.05:0,22,504	0/0:12,2:14:8.14:0,8,241	0/0:6,0:19:40.38:0,40,261	0/0:4,0:16:21.09:0,21,127	0/0:6,0:28:42.97:0,43,244	0/1:7,14:23:70.81:185,0,71	1/1:6,19:26:40.40:385,40,0	0/0:21,1:24:57.93:0,58,492	1/1:3,6:10:19.88:137,20,0
chr10	54810397	.	C	CTTTT	4271.66	PASS	AB=0.790;AC=20;AF=0.357;AN=56;BaseQRankSum=0.338;DP=600;FS=2.648;HRun=10;HaplotypeScore=98.7228;InbreedingCoeff=0.8419;MQ=69.96;MQ0=3;MQRankSum=-4.553;QD=18.57;ReadPosRankSum=1.466;VQSLOD=2.6613;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:9,21:37:27.09:603,27,0	1/1:2,0:10:15.76:102,16,0	0/0:36,0:24:24.07:0,24,348	0/1:40,0:27:3.96:4,0,323	0/0:22,0:22:60.10:0,60,794	0/0:21,0:23:63.25:0,63,862	0/0:18,0:18:45.03:0,45,575	0/0:25,0:27:63.07:0,63,805	0/0:12,0:12:27:0,27,382	0/0:24,0:24:60.12:0,60,825	0/0:19,0:19:42.03:0,42,563	1/1:3,9:12:5.98:91,6,0	1/1:7,8:15:15.05:353,15,0	0/0:24,0:24:53.88:0,54,735	0/0:20,0:20:48.13:0,48,673	1/1:2,0:22:49.72:288,50,0	1/1:7,9:16:15.05:320,15,0	1/1:7,13:20:26.76:516,27,0	0/0:21,0:22:57.10:0,57,734	0/0:29,0:30:44.97:0,45,841	0/0:16,0:16:42.08:0,42,544	1/1:5,8:14:21.03:431,21,0	1/1:7,17:26:45.15:1027,45,0	0/1:5,13:18:15.37:538,0,15	0/0:18,0:18:48.13:0,48,666	0/0:26,0:26:57.04:0,57,737	0/0:20,0:20:44.99:0,45,598	0/0:11,0:11:17.95:0,18,255
chr10	54811156	.	CTGTA	C	5672.23	PASS	AB=0.816;AC=23;AF=0.460;AN=50;BaseQRankSum=-3.038;DP=790;FS=2.625;HRun=0;HaplotypeScore=148.2419;InbreedingCoeff=0.8862;MQ=68.71;MQ0=6;MQRankSum=1.645;QD=16.68;ReadPosRankSum=0.491;VQSLOD=4.7799;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:24,18:42:42.14:643,42,0	1/1:7,9:16:18.06:276,18,0	./.	./.	0/0:35,0:34:45.15:0,45,1049	0/0:25,0:40:45.15:0,45,811	0/0:21,0:25:12.03:0,12,182	./.	0/0:12,0:27:45.14:0,45,753	0/0:17,0:29:45.15:0,45,779	0/0:14,0:20:5.96:0,6,122	1/1:15,17:32:36.12:552,36,0	1/1:19,17:36:36.12:551,36,0	0/0:14,0:31:30.10:0,30,541	0/0:18,0:36:51.17:0,51,886	1/1:20,12:32:27.09:414,27,0	0/0:34,0:34:48.14:0,48,1069	0/0:20,0:19:30.10:0,30,700	1/1:16,2:17:9.03:138,9,0	1/1:10,12:22:33.11:505,33,0	1/1:8,10:18:24.08:368,24,0	1/1:15,14:30:42.14:625,42,0	1/1:12,14:27:39.13:579,39,0	0/1:24,7:31:99:194,0,429	0/0:15,0:26:27.09:0,27,504	0/0:8,0:24:54.18:0,54,971	1/1:13,22:35:54.18:827,54,0	0/0:8,0:13:18.06:0,18,300
chr10	54811422	.	GCACA	G	1586.76	PASS	AB=0.840;AC=19;AF=0.380;AN=50;BaseQRankSum=-0.546;DP=578;FS=1.456;HRun=0;HaplotypeScore=121.3281;InbreedingCoeff=0.5885;MQ=53.47;MQ0=7;MQRankSum=2.070;QD=7.35;ReadPosRankSum=2.136;VQSLOD=2.4112;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:25,10:34:11.83:147,12,0	1/1:5,0:12:14.96:125,15,0	./.	./.	0/0:11,0:22:5.68:0,6,38	./.	0/0:25,0:22:12.03:0,12,196	0/0:20,0:20:15.01:0,15,189	0/0:7,0:13:9.03:0,9,157	0/0:13,0:13:24.04:0,24,390	0/0:17,0:17:0:0,0,0	1/1:11,5:16:12.03:168,12,0	1/1:10,7:17:9.03:140,9,0	0/1:13,1:22:34.67:35,0,129	0/0:21,0:22:23.71:0,24,428	1/1:14,0:26:18.02:167,18,0	1/1:11,7:18:12.04:187,12,0	1/1:9,2:12:4.30:72,4,0	0/0:13,0:14:11.78:0,12,168	0/0:13,0:15:12.01:0,12,191	0/0:33,0:53:17.06:0,17,222	0/1:7,4:12:29.76:145,0,30	0/1:5,0:6:6.48:38,0,6	1/1:24,15:40:36.11:542,36,0	0/0:13,0:23:3.01:0,3,53	0/0:27,0:26:45.02:0,45,696	0/0:24,0:24:42.61:0,43,762	0/0:3,0:3:2.97:0,3,20
chr10	54812378	.	TC	T	10763.45	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=6.861;DP=683;FS=0.288;HRun=2;HaplotypeScore=89.7582;InbreedingCoeff=0.9997;MQ=84.87;MQ0=0;MQRankSum=-7.791;QD=37.37;ReadPosRankSum=9.403;VQSLOD=3.3632;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,40:40:99:1427,102,0	1/1:0,16:16:42.14:587,42,0	0/0:28,0:27:81.25:0,81,1255	0/0:23,0:23:43.89:0,44,876	0/0:28,0:28:84.18:0,84,1293	0/0:20,0:20:57.19:0,57,911	0/0:23,0:23:69.24:0,69,1096	0/0:25,0:25:75.24:0,75,1168	0/0:13,0:13:39.13:0,39,621	0/0:20,0:20:60.20:0,60,953	0/0:18,0:18:51.17:0,51,815	1/1:1,31:32:75.22:1034,75,0	1/1:0,19:19:54.18:754,54,0	0/0:24,0:24:72.23:0,72,1123	0/0:26,0:26:78.25:0,78,1215	1/1:0,30:30:87.29:1217,87,0	1/1:0,38:38:99:1469,105,0	1/1:0,30:30:84.28:1172,84,0	0/0:22,0:22:63.21:0,63,1002	0/0:20,0:20:57.19:0,57,908	0/0:32,0:32:90.31:0,90,1436	1/1:1,21:22:60.20:838,60,0	1/1:0,24:24:60.20:839,60,0	1/1:0,37:37:99:1427,102,0	0/0:22,0:22:63.20:0,63,984	0/0:22,0:22:66.22:0,66,1051	0/0:21,0:21:63.21:0,63,989	0/0:8,0:8:24.07:0,24,360
chr10	54812997	.	CTGTGTTTGTGTGTG	C	832.84	PASS	AB=0.979;AC=12;AF=0.222;AN=54;BaseQRankSum=-1.782;DP=448;FS=22.824;HRun=0;HaplotypeScore=146.2554;InbreedingCoeff=0.3305;MQ=65.57;MQ0=10;MQRankSum=0.143;QD=6.41;ReadPosRankSum=1.906;VQSLOD=0.7690;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:30:99:123,0,1804	0/1:6,0:7:3.53:4,0,129	0/0:23,0:14:11.21:0,11,340	0/0:23,0:18:25.21:0,25,293	0/0:14,0:14:36.05:0,36,911	0/0:17,0:17:38.48:0,38,628	0/0:15,0:15:30.53:0,31,797	0/0:19,0:19:54.02:0,54,648	0/0:21,0:21:27.01:0,27,826	0/0:14,0:14:39.07:0,39,1267	0/0:14,0:13:27.94:0,28,837	0/1:17,0:17:99:115,0,160	0/0:14,0:14:3.48:0,3,87	0/0:11,0:11:15.02:0,15,296	0/0:14,0:14:25.28:0,25,494	0/0:18,0:18:41.92:0,42,675	0/1:16,0:16:49.77:50,0,730	0/1:14,0:13:55.83:56,0,449	1/1:11,0:10:26.86:209,27,0	./.	1/1:11,0:11:11.96:117,12,0	0/0:12,0:12:0.47:0,0,1	0/1:13,0:13:87.63:137,0,88	0/0:24,0:23:9.03:0,9,237	0/0:13,0:13:21.02:0,21,788	0/0:24,0:24:67.84:0,68,2084	1/1:8,0:6:20.92:183,21,0	0/0:11,0:10:23.99:0,24,637
chr10	54812999	.	GTGTT	G	1671.08	PASS	AB=0.986;AC=20;AF=0.370;AN=54;BaseQRankSum=1.734;DP=442;FS=2.984;HRun=0;HaplotypeScore=80.5825;InbreedingCoeff=0.7636;MQ=65.44;MQ0=10;MQRankSum=-0.547;QD=10.01;ReadPosRankSum=1.065;VQSLOD=2.7635;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:33,1:31:99:236,0,212	0/1:5,0:5:22.17:22,0,60	0/0:23,0:14:11.21:0,11,340	0/0:22,0:17:25.21:0,25,293	0/0:13,0:13:36.04:0,36,393	0/0:17,0:17:38.34:0,38,340	0/0:15,0:15:28.21:0,28,323	0/0:19,0:19:53.88:0,54,457	0/0:21,0:21:26.87:0,27,296	0/0:14,0:14:25.20:0,25,415	0/0:12,0:11:28.29:0,28,322	1/1:16,0:16:23.36:253,23,0	1/1:0,14:14:2.60:16,3,0	0/0:10,0:10:15.02:0,15,166	0/0:15,0:15:28.53:0,29,229	0/0:18,0:18:19.90:0,20,288	1/1:17,0:17:36.01:312,36,0	1/1:14,0:13:29.62:208,30,0	1/1:11,0:10:26.86:211,27,0	./.	1/1:11,0:11:11.95:92,12,0	0/0:0,12:12:0:0,0,0	1/1:13,0:13:26.91:214,27,0	1/1:4,20:22:9.03:150,9,0	0/0:14,0:14:22.64:0,23,276	0/0:25,0:25:45.99:0,46,685	1/1:8,0:6:20.89:159,21,0	0/0:10,0:9:23.99:0,24,279
chr10	54813003	.	T	TTG	675.55	PASS	AB=0.981;AC=23;AF=0.548;AN=42;BaseQRankSum=-4.912;DP=449;FS=0.000;HRun=0;HaplotypeScore=81.1632;InbreedingCoeff=0.0564;MQ=60.60;MQ0=11;MQRankSum=1.295;QD=2.44;ReadPosRankSum=-2.373;VQSLOD=1.4001;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:34,0:31:5.69:6,0,116	0/0:4,0:5:5.68:0,6,28	./.	./.	0/1:11,2:13:34.12:35,0,34	0/1:18,0:18:11.81:46,0,12	1/1:15,0:15:3.90:46,4,0	0/1:20,0:20:0:0,0,0	1/1:10,10:22:2.90:44,3,0	1/1:9,8:19:22.64:225,23,0	0/1:14,0:13:9.38:59,0,9	0/0:15,0:15:5.23:0,5,24	1/1:14,0:14:2.90:16,3,0	1/1:6,4:10:3.01:44,3,0	1/1:18,0:18:11.96:110,12,0	0/0:11,0:17:5.68:0,6,28	0/1:17,0:17:12.54:13,0,30	0/0:15,0:13:6.58:0,7,31	./.	./.	./.	0/1:12,0:12:0:0,0,0	./.	0/0:24,0:22:8.22:0,8,38	0/1:15,0:15:16.35:16,0,44	0/1:25,1:26:48.65:125,0,49	./.	1/1:10,0:9:2.99:23,3,0
chr10	54813015	.	G	GTG	645.91	PASS	AB=0.973;AC=25;AF=0.543;AN=46;BaseQRankSum=-5.964;DP=450;FS=0.000;HRun=0;HaplotypeScore=75.3544;InbreedingCoeff=0.0795;MQ=52.50;MQ0=13;MQRankSum=1.279;QD=2.09;ReadPosRankSum=-1.962;VQSLOD=1.3922;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:36,0:33:5.69:6,0,116	0/0:6,0:6:5.68:0,6,28	./.	./.	0/1:14,0:14:34.12:35,0,34	0/1:15,0:15:11.81:46,0,12	1/1:17,0:17:3.90:46,4,0	0/1:18,0:18:0:0,0,0	1/1:22,0:22:3.01:44,3,0	1/1:19,0:19:19.72:194,20,0	0/1:14,0:13:9.38:59,0,9	0/0:16,0:16:5.23:0,5,24	1/1:14,0:14:2.90:16,3,0	1/1:10,0:10:3.01:44,3,0	1/1:17,0:17:11.96:110,12,0	0/0:16,0:16:5.68:0,6,28	0/1:18,0:18:12.54:13,0,30	0/0:16,0:13:6.58:0,7,31	./.	0/1:20,0:20:0:0,0,0	0/1:9,0:9:0:0,0,0	0/1:14,0:14:0:1,0,0	./.	0/0:24,0:22:8.33:0,8,38	0/1:10,6:17:16.35:16,0,44	0/1:24,0:24:48.65:125,0,49	./.	1/1:11,0:10:2.99:23,3,0
chr10	54815677	.	CT	C	2331.46	PASS	AB=0.632;AC=44;AF=0.786;AN=56;BaseQRankSum=-1.714;DP=407;FS=0.000;HRun=15;HaplotypeScore=57.7534;InbreedingCoeff=0.1250;MQ=69.87;MQ0=12;MQRankSum=-0.342;QD=7.09;ReadPosRankSum=3.660;VQSLOD=2.5373;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:13:18.56:52,19,0	1/1:3,7:11:19.72:119,20,0	0/0:36,0:13:4.54:0,5,27	0/0:38,0:12:10.99:0,11,66	0/1:6,10:16:23.13:124,0,23	1/1:6,17:23:29.18:192,29,0	1/1:0,2:2:2.96:19,3,0	1/1:17,17:33:42.63:276,43,0	0/1:2,4:6:14.51:46,0,15	0/1:4,11:15:15.27:154,0,15	1/1:10,9:19:11.90:123,12,0	1/1:2,0:5:4.14:15,4,0	1/1:2,0:5:5.84:17,6,0	1/1:2,3:5:10.68:63,11,0	1/1:4,7:11:20.59:130,21,0	1/1:3,8:11:17.69:115,18,0	1/1:6,0:10:4.19:19,4,0	1/1:7,0:13:3.76:34,4,0	0/1:14,7:22:57.87:113,0,58	1/1:6,4:10:2.03:62,2,0	1/1:2,2:4:5.90:38,6,0	1/1:4,0:4:4.06:12,4,0	1/1:1,0:6:5.97:16,6,0	0/0:3,0:3:2.96:0,3,19	0/1:5,8:13:18.31:137,0,18	1/1:8,16:24:24.89:257,25,0	1/1:11,8:19:9.71:173,10,0	0/1:9,11:21:12.22:176,0,12
chr10	54815696	.	TAA	T	634.01	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=8.509;DP=397;FS=2.107;HRun=2;HaplotypeScore=67.8788;InbreedingCoeff=0.5378;MQ=61.06;MQ0=11;MQRankSum=-7.951;QD=9.46;ReadPosRankSum=3.505;VQSLOD=0.9692;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:14,1:15:18.19:265,18,0	0/0:8,0:8:24.03:0,24,396	0/0:32,0:11:25.51:0,26,351	0/0:38,0:13:27.86:0,28,289	0/0:17,0:17:51.16:0,51,855	0/0:19,0:19:39.13:0,39,693	0/0:3,0:3:6.02:0,6,110	0/0:34,0:32:92.27:0,92,1416	0/0:6,0:6:15.05:0,15,219	0/0:15,0:15:42.14:0,42,740	0/0:12,0:12:36.08:0,36,579	1/1:5,0:5:8.81:70,9,0	0/1:8,0:8:44.21:44,0,47	0/0:6,0:6:18.06:0,18,276	0/0:9,0:9:27.08:0,27,448	0/0:10,0:10:24.08:0,24,436	0/1:12,0:10:16.23:68,0,16	1/1:18,1:16:11.98:272,12,0	0/0:22,0:22:60.18:0,60,962	0/0:10,0:10:30.10:0,30,509	0/0:6,0:6:18.05:0,18,263	1/1:0,1:1:3.01:45,3,0	0/1:7,0:7:18.81:28,0,19	0/0:2,0:2:2.81:0,3,36	0/0:14,1:15:16.51:0,17,648	0/0:27,0:27:80.62:0,81,1309	0/0:17,0:17:48.07:0,48,715	0/0:22,0:22:48.95:0,49,1071
chr10	54815698	.	A	ATT	1817.59	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=3.957;DP=402;FS=1.937;HRun=8;HaplotypeScore=66.1035;InbreedingCoeff=0.8585;MQ=61.14;MQ0=11;MQRankSum=-8.392;QD=25.97;ReadPosRankSum=2.365;VQSLOD=3.2724;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,13:15:41.87:580,42,0	0/0:9,0:9:24.60:0,25,235	0/0:31,0:10:26.99:0,27,281	0/0:36,0:13:20.06:0,20,155	0/0:16,0:16:39.99:0,40,434	0/0:19,0:19:35.75:0,36,369	0/0:3,0:3:6.02:0,6,67	0/0:36,0:34:67.52:0,68,713	0/0:7,0:7:6:0,6,67	0/0:14,0:14:36.09:0,36,401	0/0:13,0:13:36.01:0,36,373	1/1:0,5:5:9.03:143,9,0	1/1:4,5:9:9.03:142,9,0	0/0:5,0:5:12.03:0,12,134	0/0:9,0:9:23.65:0,24,243	0/0:11,0:11:27.06:0,27,291	1/1:3,9:10:15.05:238,15,0	1/1:4,15:16:42.10:639,42,0	0/0:22,0:22:39.54:0,40,435	0/0:10,0:10:27.07:0,27,301	0/0:6,0:6:18.05:0,18,195	1/1:1,0:1:3.01:45,3,0	1/1:1,0:7:18.03:171,18,0	1/1:0,2:2:3.01:48,3,0	0/0:15,0:15:7.03:0,7,295	0/0:28,0:28:52.21:0,52,713	0/0:17,0:17:29.94:0,30,307	0/0:23,0:23:60.14:0,60,666
chr10	54817207	.	GTAGTT	G	5213.91	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-6.258;DP=701;FS=3.211;HRun=0;HaplotypeScore=194.9289;InbreedingCoeff=0.9915;MQ=93.43;MQ0=0;MQRankSum=-2.306;QD=41.05;ReadPosRankSum=1.958;VQSLOD=4.8690;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:56:99:0,160,4652	1/1:1,6:7:18.06:373,18,0	0/0:37,0:37:99:0,99,2702	0/0:26,0:26:75.24:0,75,2086	0/0:21,0:21:60.21:0,60,1219	0/0:25,0:25:69.24:0,69,1389	0/0:32,0:32:75.26:0,75,1488	0/0:39,0:39:99:0,105,2074	0/0:22,0:22:66.23:0,66,1335	0/0:27,0:27:72.25:0,72,1445	0/0:14,0:14:39.13:0,39,794	0/0:33,0:33:90.31:0,90,2727	0/0:28,0:28:75.26:0,75,2295	0/0:31,0:31:93.32:0,93,1857	0/0:35,0:35:87.30:0,87,1771	1/1:3,27:30:66.23:1368,66,0	0/0:22,0:22:66.23:0,66,2009	0/0:11,0:11:30.10:0,30,921	1/1:4,11:15:33.11:659,33,0	1/1:0,14:14:24.08:497,24,0	1/1:1,32:33:66.18:1325,66,0	0/0:14,0:14:42.13:0,42,1217	0/0:13,0:13:36.12:0,36,1085	0/0:21,0:21:51.13:0,51,1444	0/0:22,0:22:57.20:0,57,1160	0/0:41,0:41:99:0,114,2284	1/1:5,23:28:48.16:993,48,0	0/0:4,0:4:12.04:0,12,244
chr10	54817210	.	G	GTA	16673.27	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-13.987;DP=695;FS=1.278;HRun=0;HaplotypeScore=112.4656;InbreedingCoeff=0.9946;MQ=95.17;MQ0=0;MQRankSum=-2.384;QD=53.96;ReadPosRankSum=2.384;VQSLOD=5.2274;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:58:99:0,154,2363	0/0:7,0:7:20.25:0,20,114	0/0:39,0:39:99:0,111,1574	0/0:27,0:27:78.26:0,78,1157	1/1:0,20:20:60.21:1159,60,0	1/1:0,26:25:69.24:1332,69,0	1/1:3,29:32:81.28:1559,81,0	1/1:2,37:39:99:2128,111,0	1/1:0,23:23:66.23:1275,66,0	1/1:1,25:26:75.24:1414,75,0	1/1:0,13:13:39.13:753,39,0	0/0:32,0:32:90.31:0,90,1378	0/0:28,0:28:81.25:0,81,1196	1/1:0,31:31:93.32:1797,93,0	1/1:0,34:34:87.30:1680,87,0	0/0:29,0:29:69.10:0,69,359	0/0:23,0:23:69.21:0,69,1031	0/0:12,0:12:33.09:0,33,480	0/0:13,0:13:37.64:0,38,212	0/0:14,0:14:23:0,23,118	0/0:33,0:33:63.30:0,63,327	0/0:14,0:14:42.14:0,42,625	0/0:12,0:12:36.12:0,36,549	0/0:19,0:19:48.16:0,48,735	1/1:0,21:21:57.20:1101,57,0	1/1:1,39:40:99:2243,117,0	0/0:26,0:26:51.65:0,52,268	1/1:0,4:4:12.04:232,12,0
chr10	54817368	.	TC	T	2542.39	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=9.259;DP=478;FS=2.988;HRun=3;HaplotypeScore=50.2189;InbreedingCoeff=0.9622;MQ=91.24;MQ0=0;MQRankSum=-1.231;QD=29.22;ReadPosRankSum=2.407;VQSLOD=2.9975;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,108,1523	1/1:0,9:9:24.08:298,24,0	0/0:18,0:18:51.15:0,51,663	0/0:23,0:23:54.07:0,54,622	0/0:9,0:9:27.09:0,27,386	0/0:21,0:21:63.18:0,63,868	0/0:16,0:16:42.13:0,42,588	0/0:36,0:36:99:0,102,1426	0/0:13,0:13:39.11:0,39,539	0/0:11,0:11:33.09:0,33,427	0/0:3,0:3:6.02:0,6,86	0/0:17,0:17:51.16:0,51,716	0/0:19,0:19:54.17:0,54,758	0/0:12,0:12:36.12:0,36,518	0/0:23,0:23:69.23:0,69,988	1/1:1,20:21:8.47:552,8,0	0/0:31,0:31:93.31:0,93,1332	0/0:27,0:27:78.26:0,78,1123	1/1:0,6:6:18.01:206,18,0	1/1:0,15:15:39.12:483,39,0	1/1:0,24:24:63.20:781,63,0	0/0:12,0:12:36.12:0,36,517	0/0:8,0:8:21.07:0,21,302	0/0:12,0:12:36.12:0,36,519	0/0:11,0:11:30.10:0,30,431	0/0:20,0:20:60.19:0,60,843	1/1:0,12:12:33.10:406,33,0	0/0:11,0:11:30.10:0,30,432
chr10	54817993	.	TGTGTGTGTG	T	8752.99	PASS	AB=0.997;AC=36;AF=0.643;AN=56;BaseQRankSum=10.863;DP=546;FS=33.822;HRun=0;HaplotypeScore=243.6271;InbreedingCoeff=-0.2431;MQ=38.15;MQ0=18;MQRankSum=-6.295;QD=18.08;ReadPosRankSum=10.167;VQSLOD=1.9799;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:21,0:21:50.24:191,0,50	1/1:0,3:3:9.03:284,9,0	0/0:26,0:10:27.04:0,27,378	0/0:36,0:13:37.31:0,37,739	1/1:25,0:25:16.04:379,16,0	0/1:21,0:21:99:340,0,127	1/1:18,1:18:5.11:329,5,0	0/1:31,0:29:99:346,0,132	0/1:22,0:22:10.85:309,0,11	0/1:25,0:25:99:458,0,113	1/1:13,1:14:5.62:331,6,0	0/1:19,0:18:10.14:293,0,10	1/1:17,0:16:32.95:346,33,0	0/1:16,0:16:24.33:271,0,24	1/1:17,0:17:33.09:375,33,0	1/1:6,6:11:30.01:758,30,0	0/1:14,0:14:14.09:207,0,14	0/1:15,0:15:99:173,0,136	0/1:18,0:15:71.69:224,0,72	1/1:23,1:24:24.04:453,24,0	0/1:8,0:8:34.97:40,0,35	0/1:21,1:22:17.60:366,0,18	0/1:15,0:14:38.28:178,0,38	0/1:22,0:21:6.31:168,0,6	0/1:20,0:20:5.83:367,0,6	1/1:24,0:23:43.56:592,44,0	1/1:32,1:33:61.15:898,61,0	0/1:7,0:7:23.91:76,0,24
chr10	54817995	.	TGTGTGTG	T	19872.85	PASS	AB=0.722;AC=51;AF=0.911;AN=56;BaseQRankSum=3.956;DP=476;FS=26.736;HRun=0;HaplotypeScore=171.9185;InbreedingCoeff=0.6935;MQ=37.66;MQ0=17;MQRankSum=-2.832;QD=47.77;ReadPosRankSum=5.358;VQSLOD=3.1892;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,8:19:27.08:619,27,0	1/1:4,0:4:9.03:179,9,0	0/0:25,0:9:23.80:0,24,279	0/0:35,0:13:37.31:0,37,559	1/1:8,13:21:51.10:1131,51,0	1/1:5,12:17:8.77:963,9,0	1/1:11,6:16:30.08:626,30,0	1/1:22,7:27:72.54:977,73,0	1/1:5,10:15:30.10:807,30,0	1/1:8,13:21:57.11:1150,57,0	1/1:7,7:14:32.89:697,33,0	1/1:5,9:13:30.03:744,30,0	1/1:6,9:14:33.10:812,33,0	1/1:4,9:13:30.09:753,30,0	1/1:2,11:13:32.70:887,33,0	1/1:12,0:11:30.01:521,30,0	1/1:7,6:13:27.04:559,27,0	0/1:8,5:13:39.33:525,0,39	1/1:13,5:15:38.55:561,39,0	1/1:8,11:19:42.09:994,42,0	1/1:6,1:7:5.95:99,6,0	1/1:7,9:16:33.10:812,33,0	1/1:5,8:12:24:524,24,0	1/1:12,7:18:18.46:469,18,0	1/1:5,12:17:36.12:968,36,0	1/1:8,15:22:66.09:1380,66,0	1/1:7,22:29:78.24:1907,78,0	1/1:4,1:5:12.01:208,12,0
chr10	54818001	.	TG	T	6151.62	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=4.759;DP=483;FS=7.453;HRun=1;HaplotypeScore=183.9868;InbreedingCoeff=0.8668;MQ=39.57;MQ0=14;MQRankSum=-2.313;QD=14.37;ReadPosRankSum=3.566;VQSLOD=4.5277;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:19:26.65:188,27,0	1/1:4,0:4:8.83:54,9,0	0/0:22,0:10:20.63:0,21,184	0/0:32,0:11:15.34:0,15,189	1/1:22,0:22:44.34:300,44,0	1/1:17,0:17:44.40:309,44,0	1/1:16,0:15:29.60:210,30,0	1/1:30,2:30:85.56:586,86,0	1/1:16,0:16:29.42:183,29,0	1/1:20,0:20:56.28:398,56,0	1/1:16,0:16:29.47:189,29,0	1/1:15,0:14:32.42:209,32,0	1/1:16,0:15:35.42:232,35,0	1/1:14,0:14:35.50:245,35,0	1/1:14,0:14:35.29:218,35,0	1/1:13,0:12:32.40:205,32,0	1/1:12,0:12:26.36:184,26,0	1/1:13,0:13:8.17:108,8,0	1/1:15,2:14:41.32:267,41,0	1/1:21,0:21:41.26:264,41,0	1/1:7,0:7:8.84:55,9,0	1/1:19,0:19:38.33:246,38,0	1/1:14,0:13:20.61:128,21,0	1/1:18,0:17:18.08:120,18,0	1/1:17,0:17:35.30:219,35,0	1/1:23,0:22:64.99:434,65,0	1/1:30,0:30:79.67:535,80,0	1/1:3,0:3:8.93:66,9,0
chr10	54818003	.	T	TA	10814.77	PASS	AB=0.967;AC=53;AF=0.946;AN=56;BaseQRankSum=3.310;DP=505;FS=3.987;HRun=1;HaplotypeScore=178.7577;InbreedingCoeff=0.5943;MQ=40.20;MQ0=11;MQRankSum=-2.568;QD=22.34;ReadPosRankSum=1.653;VQSLOD=4.9096;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,10:20:39.73:359,40,0	1/1:3,1:4:8.96:68,9,0	0/0:21,0:9:18.38:0,18,153	0/1:28,1:10:21.02:21,0,165	1/1:16,9:24:47.91:476,48,0	1/1:15,5:20:59.80:560,60,0	1/1:9,8:16:44.79:396,45,0	1/1:15,21:34:99:1329,99,0	1/1:11,5:16:26.26:315,26,0	1/1:15,7:22:63.02:679,63,0	1/1:11,6:17:29.95:294,30,0	1/1:11,4:14:35.87:316,36,0	1/1:11,4:15:44.83:400,45,0	1/1:11,5:16:44.87:412,45,0	1/1:12,2:14:38.44:306,38,0	1/1:9,3:12:35.03:313,35,0	1/1:6,6:12:33.38:317,33,0	1/1:7,6:13:29.95:283,30,0	1/1:9,9:15:45.08:556,45,0	1/1:14,8:22:47.81:390,48,0	1/1:3,4:7:14.94:152,15,0	1/1:13,7:20:53.81:473,54,0	1/1:11,5:15:32.79:243,33,0	1/1:9,9:17:18.37:154,18,0	1/1:12,5:17:44.73:334,45,0	1/1:20,6:25:74.92:757,75,0	1/1:25,6:31:86.43:775,86,0	1/1:4,2:6:12.01:138,12,0
chr10	54818026	.	AT	A	10467.46	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=1.385;DP=506;FS=4.755;HRun=9;HaplotypeScore=152.7156;InbreedingCoeff=0.9379;MQ=55.44;MQ0=1;MQRankSum=-5.578;QD=22.13;ReadPosRankSum=3.855;VQSLOD=3.4167;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,19:20:51.03:466,51,0	1/1:1,2:3:6:55,6,0	0/0:16,0:14:29.91:0,30,301	0/0:17,0:14:24.02:0,24,255	1/1:5,20:24:48:437,48,0	1/1:2,18:20:51.02:464,51,0	1/1:3,14:17:39.02:356,39,0	1/1:5,33:38:99:948,105,0	1/1:2,12:14:36.02:329,36,0	1/1:2,19:21:54.01:492,54,0	1/1:2,17:19:51.03:466,51,0	1/1:1,13:14:36.01:328,36,0	1/1:5,11:16:30:274,30,0	1/1:0,18:18:54.03:493,54,0	1/1:1,11:12:33.02:302,33,0	1/1:3,15:18:42.01:384,42,0	1/1:1,13:14:39.02:357,39,0	1/1:3,7:10:18:164,18,0	1/1:5,12:17:33:298,33,0	1/1:3,21:24:66.02:603,66,0	1/1:2,6:8:18.01:163,18,0	1/1:4,17:21:53.99:487,54,0	1/1:2,13:14:36.01:329,36,0	1/1:2,17:19:26.89:247,27,0	1/1:7,13:20:39.01:356,39,0	1/1:1,24:25:72.04:658,72,0	1/1:6,26:32:81.02:737,81,0	1/1:0,13:13:30.02:274,30,0
chr10	54818400	.	T	TAA	6243.64	PASS	AB=0.969;AC=26;AF=0.464;AN=56;BaseQRankSum=-10.541;DP=480;FS=4.746;HRun=11;HaplotypeScore=67.3132;InbreedingCoeff=0.8475;MQ=65.17;MQ0=2;MQRankSum=0.237;QD=25.69;ReadPosRankSum=-2.618;VQSLOD=4.2211;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:69.02:0,69,669	0/0:1,0:8:19.21:0,19,83	0/1:8,0:8:6.71:7,0,47	0/0:6,0:6:8.80:0,9,69	1/1:8,8:17:26.02:297,26,0	1/1:2,16:17:27.09:391,27,0	1/1:2,8:12:23.56:298,24,0	1/1:2,20:22:60.18:848,60,0	1/1:4,12:18:35.49:437,35,0	1/1:3,10:13:20.46:428,20,0	1/1:6,17:23:54.14:753,54,0	0/0:19,0:19:46.34:0,46,462	0/0:12,0:13:32.78:0,33,303	1/1:3,9:12:18.06:261,18,0	1/1:1,16:21:49.58:611,50,0	0/1:3,1:15:53.46:53,0,85	0/0:30,0:30:65.90:0,66,622	0/0:30,0:31:74.78:0,75,710	0/0:2,0:15:38.43:0,38,178	0/0:1,0:13:30.17:0,30,131	0/0:2,0:9:16.46:0,16,72	0/0:12,0:14:26.68:0,27,239	0/0:22,0:22:41.98:0,42,395	0/0:3,0:3:9.01:0,9,87	1/1:6,10:16:28.91:396,29,0	1/1:0,22:22:63.11:813,63,0	0/0:5,0:23:49.37:0,49,215	1/1:1,22:24:45.15:652,45,0
chr10	54818804	.	A	AG	439.61	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-1.467;DP=551;FS=5.388;HRun=6;HaplotypeScore=76.9473;InbreedingCoeff=0.9328;MQ=74.82;MQ0=5;MQRankSum=-0.995;QD=15.16;ReadPosRankSum=-0.150;VQSLOD=3.3469;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:42:99:0,99,977	1/1:2,4:6:8.94:92,9,0	0/0:34,0:26:61.29:0,61,607	0/0:30,0:17:40.71:0,41,350	0/0:24,0:24:60.92:0,61,582	0/0:18,0:18:51.09:0,51,509	0/0:25,0:25:57.10:0,57,574	0/0:36,0:35:81.09:0,81,804	0/0:23,0:22:60.12:0,60,605	0/0:19,0:19:45.09:0,45,454	0/0:10,0:10:24.01:0,24,234	0/0:15,0:15:30.06:0,30,301	0/0:12,0:12:32.55:0,33,311	0/0:26,0:26:63.12:0,63,636	0/0:25,0:25:72.16:0,72,734	1/1:5,18:22:39.52:461,40,0	0/0:14,0:14:26.64:0,27,301	0/0:9,0:9:21.02:0,21,204	0/0:14,0:14:42.09:0,42,423	0/0:13,0:13:33.06:0,33,327	0/0:17,0:17:9.02:0,9,92	0/0:12,0:12:35.94:0,36,336	0/0:17,0:17:39.07:0,39,390	0/0:17,0:17:42.06:0,42,412	0/0:11,0:11:26.89:0,27,249	0/0:26,0:26:69.09:0,69,682	0/0:24,0:24:57.08:0,57,569	0/0:8,0:8:21.05:0,21,214
chr10	54819334	.	ACACACACACACACACACACACGCACG	A	2398.87	PASS	AB=0.925;AC=17;AF=0.315;AN=54;BaseQRankSum=0.880;DP=541;FS=3.363;HRun=0;HaplotypeScore=249.4808;InbreedingCoeff=-0.1350;MQ=43.78;MQ0=35;MQRankSum=0.233;QD=8.63;ReadPosRankSum=0.944;VQSLOD=2.7150;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:25:33.06:0,33,1125	1/1:2,0:2:2.93:25,3,0	0/0:9,0:1:3.01:0,3,41	0/0:13,0:5:15.01:0,15,175	0/1:13,0:11:46.12:72,0,46	0/1:11,0:11:14.55:177,0,15	0/1:25,0:25:53.93:245,0,54	0/1:23,0:21:71.83:72,0,156	0/1:13,0:13:8.54:266,0,9	0/1:21,0:20:73.84:213,0,74	0/0:11,0:7:3.48:0,3,47	0/0:27,0:27:29.78:0,30,1169	0/0:18,0:18:31.10:0,31,791	0/1:17,0:16:2.52:337,0,3	0/1:7,18:23:48.43:156,0,48	0/0:26,0:25:12.40:0,12,408	0/0:26,0:23:54.61:0,55,2266	0/0:24,0:23:51.11:0,51,2158	0/1:15,0:14:24.72:25,0,352	./.	1/1:68,0:63:8.51:63,9,0	0/0:17,0:17:15.05:0,15,870	0/0:12,0:11:12.04:0,12,617	0/0:45,0:41:96.31:0,96,4202	0/1:9,1:10:9.07:283,0,9	0/1:6,10:16:15.30:340,0,15	0/1:8,0:6:39.46:39,0,173	0/1:10,1:9:59.36:244,0,59
chr10	54819336	.	A	ACG	1619.34	PASS	AB=0.965;AC=21;AF=0.389;AN=54;BaseQRankSum=-1.041;DP=537;FS=0.504;HRun=0;HaplotypeScore=112.7929;InbreedingCoeff=0.2376;MQ=43.38;MQ0=35;MQRankSum=1.051;QD=5.91;ReadPosRankSum=-0.291;VQSLOD=3.2305;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:25:12.79:0,13,248	1/1:2,0:2:2.87:25,3,0	0/0:8,0:1:2.98:0,3,21	0/0:13,0:5:14.96:0,15,134	0/1:15,0:13:2.48:77,0,2	1/1:11,0:11:6.90:269,7,0	0/1:24,1:25:2.54:243,0,3	0/1:21,0:19:89.84:90,0,97	1/1:12,2:14:9.67:193,10,0	0/1:18,2:19:52.68:181,0,53	0/1:9,1:6:17.96:18,0,18	0/0:27,0:27:22.51:0,23,250	0/0:18,0:18:4.26:0,4,218	1/1:14,3:16:19.98:193,20,0	0/1:25,0:23:13.88:56,0,14	0/0:24,0:23:8.43:0,8,55	0/0:25,0:22:42.61:0,43,408	0/0:24,0:23:29.07:0,29,392	0/0:14,0:13:0.19:0,0,113	./.	1/1:69,0:64:8.91:63,9,0	0/0:17,0:17:14.73:0,15,165	0/0:12,0:11:11.37:0,11,103	0/0:45,0:41:95.71:0,96,957	0/1:9,1:10:2.04:205,0,2	0/1:16,0:16:32.35:55,0,32	1/1:8,0:6:9.34:41,9,0	0/1:11,0:9:14.99:79,0,15
chr10	54819354	.	ACG	A	1894.20	PASS	AB=0.966;AC=36;AF=0.643;AN=56;BaseQRankSum=-0.036;DP=519;FS=4.491;HRun=0;HaplotypeScore=119.5220;InbreedingCoeff=0.1293;MQ=42.30;MQ0=31;MQRankSum=-0.889;QD=4.86;ReadPosRankSum=-4.416;VQSLOD=1.5534;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:24,2:25:42.23:42,0,124	0/1:3,0:3:0:0,0,0	0/0:3,0:1:2.98:0,3,21	0/1:5,0:2:11:12,0,11	1/1:6,10:14:3.01:32,3,0	1/1:9,2:11:16.72:142,17,0	1/1:24,3:25:17.69:210,18,0	1/1:19,0:17:22.63:143,23,0	1/1:18,1:19:33.29:278,33,0	1/1:21,0:21:36.72:281,37,0	1/1:9,0:5:2.99:24,3,0	0/1:28,2:30:26.58:27,0,101	0/1:18,1:19:22.43:22,0,123	1/1:15,2:16:17.88:189,18,0	1/1:24,0:21:2.96:20,3,0	0/1:25,1:25:13.52:32,0,14	0/1:24,1:20:15.27:15,0,128	0/1:20,0:19:27.29:27,0,183	0/0:20,0:18:21.93:0,22,106	0/0:9,0:8:2.99:0,3,24	0/0:57,0:52:0:0,0,0	0/1:19,0:19:0.65:1,0,79	0/1:11,1:11:29.32:29,0,42	0/0:40,0:37:18.36:0,18,557	1/1:13,1:14:10.99:228,11,0	1/1:11,0:11:1.75:92,2,0	1/1:7,1:6:14.71:106,15,0	1/1:9,0:7:15.28:104,15,0
chr10	54819360	.	GCA	G	119.07	PASS	AB=0.974;AC=23;AF=0.411;AN=56;BaseQRankSum=4.991;DP=478;FS=3.729;HRun=0;HaplotypeScore=121.9022;InbreedingCoeff=0.0438;MQ=44.09;MQ0=30;MQRankSum=1.419;QD=0.55;ReadPosRankSum=-1.546;VQSLOD=1.4958;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:23:19.30:0,19,297	0/1:3,0:3:0:0,0,0	0/1:5,1:4:0.78:1,0,53	0/1:9,0:3:21.77:22,0,38	1/1:13,0:12:2.84:9,3,0	0/1:8,0:8:6.63:7,0,17	0/1:22,0:20:18.75:20,0,19	0/0:12,0:10:11.19:0,11,90	1/1:17,0:17:6.70:33,7,0	1/1:12,0:12:1.76:15,2,0	1/1:9,0:5:1.55:4,2,0	0/0:29,0:29:5.75:0,6,150	0/1:14,1:15:35.55:36,0,159	0/1:17,0:16:24.33:24,0,57	1/1:23,0:21:0.47:1,0,0	0/0:26,0:25:8.92:0,9,71	0/0:26,0:21:18.95:0,19,447	0/0:18,0:17:36.85:0,37,424	0/0:15,0:14:40.22:0,40,493	0/0:7,0:6:3.01:0,3,44	0/0:50,4:49:0:0,0,0	0/1:17,0:18:21.46:21,0,164	0/1:12,0:11:1.68:2,0,27	0/0:40,0:37:37.81:0,38,446	1/1:13,0:13:0.61:48,1,0	0/0:11,0:11:1.23:0,1,34	0/1:11,0:9:11.70:12,0,24	0/1:7,0:5:4.50:4,0,34
chr10	54819362	.	ACG	A	746.49	PASS	AB=0.967;AC=21;AF=0.375;AN=56;BaseQRankSum=3.991;DP=476;FS=20.841;HRun=0;HaplotypeScore=118.1836;InbreedingCoeff=-0.1550;MQ=44.32;MQ0=29;MQRankSum=2.153;QD=2.26;ReadPosRankSum=2.142;VQSLOD=0.8405;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:23:0.26:0,0,219	0/1:3,0:3:0:0,0,0	0/1:8,0:5:3.10:3,0,70	0/1:12,0:3:33.47:33,0,49	0/0:11,0:10:2.94:0,3,18	0/0:7,0:7:5.92:0,6,39	0/1:18,0:16:1.78:2,0,21	0/0:11,0:9:12.30:0,12,56	0/1:18,0:18:9.10:11,0,9	0/1:11,0:11:12.79:15,0,13	1/1:7,1:4:1.25:3,1,0	0/1:28,0:28:46.87:47,0,76	0/1:10,5:15:99:171,0,140	0/0:17,0:17:4.15:0,4,106	0/0:23,0:21:2.57:0,3,11	0/1:26,0:25:10.74:55,0,11	0/1:24,2:21:43.14:43,0,336	0/0:18,0:17:4.44:0,4,255	0/0:15,0:14:32.42:0,32,354	0/0:7,0:6:2.96:0,3,19	1/1:53,1:49:8.68:72,9,0	0/1:17,1:18:61.36:61,0,128	0/1:12,2:13:2.29:66,0,2	0/1:40,0:37:99:144,0,256	0/1:13,0:13:7.96:11,0,8	0/0:12,0:12:12.24:0,12,55	1/1:11,0:9:16.67:139,17,0	0/1:8,0:6:15.48:15,0,53
chr10	54819364	.	G	GCA	1839.10	PASS	AB=0.865;AC=17;AF=0.304;AN=56;BaseQRankSum=-3.506;DP=477;FS=7.594;HRun=0;HaplotypeScore=121.2424;InbreedingCoeff=-0.0350;MQ=44.47;MQ0=25;MQRankSum=1.981;QD=5.89;ReadPosRankSum=2.993;VQSLOD=2.6354;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:17,8:25:32.28:32,0,70	0/0:3,0:3:0:0,0,0	0/1:8,0:5:4.23:4,0,55	0/1:15,0:5:33.55:34,0,44	0/0:12,0:11:2.94:0,3,18	0/0:6,0:6:5.88:0,6,39	0/0:17,0:15:11.01:0,11,87	0/0:10,0:8:14.81:0,15,151	0/0:18,0:18:26.50:0,26,189	0/0:11,0:12:27.62:0,28,179	0/0:8,0:4:2.98:0,3,21	0/1:18,11:29:48.68:168,0,49	0/1:14,1:15:79.33:252,0,79	0/0:17,0:17:22.19:0,22,163	0/0:23,0:21:2.64:0,3,12	0/1:23,0:23:18.91:73,0,19	0/1:22,3:21:99:192,0,112	0/1:13,8:20:99:211,0,120	0/1:16,0:15:22.47:22,0,212	0/0:7,0:6:2.84:0,3,15	1/1:50,0:46:8.98:72,9,0	0/1:15,3:18:63.81:126,0,64	1/1:12,1:12:11.29:139,11,0	0/1:15,25:37:8.90:468,0,9	0/0:12,0:12:20.76:0,21,140	0/0:12,0:12:20.72:0,21,143	1/1:13,0:11:11.10:205,11,0	0/0:8,0:6:1.94:0,2,89
chr10	54819366	.	ACG	A	1273.92	PASS	AB=0.978;AC=28;AF=0.500;AN=56;BaseQRankSum=1.295;DP=481;FS=14.463;HRun=0;HaplotypeScore=122.8758;InbreedingCoeff=-0.2782;MQ=46.30;MQ0=21;MQRankSum=2.595;QD=3.03;ReadPosRankSum=2.071;VQSLOD=1.9172;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:24,1:25:29.46:29,0,88	0/1:3,0:3:0:0,0,0	0/0:9,0:5:6.67:0,7,91	0/1:19,1:8:18.71:19,0,93	0/0:11,0:11:2.92:0,3,17	0/0:7,0:7:5.78:0,6,35	0/0:14,3:15:2.45:0,2,23	0/1:10,0:9:34.43:36,0,34	0/1:17,0:17:6.29:13,0,6	0/1:9,2:11:24.33:88,0,24	1/1:7,0:4:1.25:3,1,0	1/1:30,0:30:7.98:64,8,0	0/1:16,0:16:45.23:171,0,45	0/0:15,1:16:15.74:0,16,101	0/1:23,1:22:5.41:19,0,5	0/1:23,0:23:10.83:56,0,11	0/1:22,3:21:91.71:113,0,92	0/1:20,0:19:24.60:25,0,63	0/1:17,0:16:5.72:6,0,69	0/1:11,0:10:13.84:19,0,14	1/1:46,0:43:11.64:92,12,0	0/1:18,0:18:48.19:58,0,48	1/1:14,0:13:19.50:146,19,0	0/1:39,0:36:26.93:234,0,27	0/1:12,0:12:4.27:32,0,4	0/1:13,0:13:14.71:15,0,33	1/1:12,0:11:16.92:152,17,0	0/1:8,0:6:40.18:40,0,47
chr10	54819673	.	C	CTTCTT	13149.55	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-4.544;DP=440;FS=19.776;HRun=0;HaplotypeScore=144.6497;InbreedingCoeff=0.8541;MQ=66.15;MQ0=4;MQRankSum=-4.622;QD=40.59;ReadPosRankSum=-2.838;VQSLOD=2.5753;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,0:18:30.10:660,30,0	0/0:6,0:6:14.40:0,14,193	0/0:35,0:20:20.07:0,20,274	0/0:17,0:7:1.69:0,2,56	1/1:9,12:24:54.78:1047,55,0	1/1:7,13:22:60.09:1444,60,0	1/1:5,7:15:39.92:882,40,0	1/1:18,8:28:74.84:1268,75,0	1/1:4,3:7:19.08:344,19,0	1/1:11,8:20:56.91:1070,57,0	1/1:9,6:19:43.69:878,44,0	1/1:2,0:14:12.04:292,12,0	1/1:1,0:17:12.04:289,12,0	1/1:6,6:12:35.49:639,35,0	1/1:13,4:18:51.29:727,51,0	0/0:11,0:12:36.05:0,36,591	1/1:0,0:14:8.90:162,9,0	1/1:1,0:11:9.02:133,9,0	0/0:8,0:9:11.78:0,12,197	0/0:6,0:12:30.08:0,30,474	0/0:4,0:5:9.01:0,9,117	1/1:1,0:7:3.01:74,3,0	1/1:0,0:17:13.19:346,13,0	1/1:2,0:2:2.99:25,3,0	1/1:11,12:25:66:1438,66,0	1/1:15,8:23:57.99:897,58,0	0/0:15,0:19:47.30:0,47,827	1/1:5,5:10:26.97:535,27,0
chr10	54819693	.	A	AAC	8938.29	PASS	AB=1.000;AC=40;AF=0.714;AN=56;BaseQRankSum=-1.876;DP=424;FS=11.259;HRun=0;HaplotypeScore=125.7089;InbreedingCoeff=0.5802;MQ=60.92;MQ0=4;MQRankSum=-2.814;QD=29.40;ReadPosRankSum=1.300;VQSLOD=6.3586;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:17:13.32:75,13,0	0/1:6,0:6:4.72:5,0,9	0/0:33,0:17:25.91:0,26,330	0/0:25,0:10:17.17:0,17,146	1/1:6,12:20:58.03:787,58,0	1/1:3,13:19:51.06:764,51,0	1/1:0,9:10:27.08:438,27,0	1/1:8,17:25:72.08:1042,72,0	1/1:2,6:8:24.07:398,24,0	1/1:5,13:19:54.62:850,55,0	1/1:5,13:19:51.58:786,52,0	1/1:14,0:14:0.79:54,1,0	0/1:16,0:16:0.43:63,0,0	1/1:3,8:11:33.08:525,33,0	1/1:2,11:15:45.06:682,45,0	0/0:10,0:10:15.29:0,15,92	0/1:16,0:16:11.60:43,0,12	1/1:11,0:12:3.62:83,4,0	0/0:13,0:13:18.71:0,19,172	0/0:9,0:9:5.82:0,6,94	0/1:5,0:5:6.89:7,0,37	1/1:7,0:7:3.72:26,4,0	1/1:14,0:14:2.09:18,2,0	1/1:1,0:1:1.82:5,2,0	1/1:4,15:21:60.14:920,60,0	1/1:4,15:19:57.16:940,57,0	0/0:29,0:28:21.35:0,21,299	1/1:2,7:9:27.07:427,27,0
chr10	54819714	.	TG	T	241	PASS	AB=0.969;AC=6;AF=0.107;AN=56;BaseQRankSum=-2.657;DP=446;FS=2.648;HRun=1;HaplotypeScore=145.0937;InbreedingCoeff=0.2864;MQ=62.59;MQ0=2;MQRankSum=-0.782;QD=2.71;ReadPosRankSum=0.545;VQSLOD=-0.2032;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:28.51:0,29,439	0/0:8,0:8:24.08:0,24,307	0/1:18,3:17:37.57:38,0,152	0/0:23,3:12:15.71:0,16,154	0/0:23,0:23:50.43:0,50,375	0/0:18,0:18:47.16:0,47,322	0/0:8,0:8:9.50:0,10,76	0/0:23,0:23:28.33:0,28,349	0/0:7,0:7:20.44:0,20,135	0/0:20,0:20:54.64:0,55,312	0/0:20,0:20:42.83:0,43,257	0/0:15,0:15:17.85:0,18,333	0/0:14,0:14:20.46:0,20,282	0/0:11,0:10:26.13:0,26,166	0/0:15,0:15:40.39:0,40,214	0/0:9,0:9:27.07:0,27,334	0/0:20,0:20:38.99:0,39,455	0/0:15,0:15:33.06:0,33,389	0/1:17,0:17:10.22:10,0,19	0/1:12,0:12:8.75:47,0,9	0/1:6,0:6:8.69:9,0,13	0/0:6,0:6:9.02:0,9,116	0/0:14,0:14:22.69:0,23,230	0/0:3,0:3:9.01:0,9,101	0/0:25,0:25:69.63:0,70,468	0/0:22,0:22:63.38:0,63,377	1/1:31,2:32:42.25:264,42,0	0/0:12,0:12:35.14:0,35,251
chr10	54819715	.	G	GT	4560.79	PASS	AB=0.791;AC=24;AF=0.429;AN=56;BaseQRankSum=-0.724;DP=450;FS=20.107;HRun=9;HaplotypeScore=129.8074;InbreedingCoeff=0.8049;MQ=63.62;MQ0=2;MQRankSum=-3.347;QD=19.66;ReadPosRankSum=1.527;VQSLOD=3.6325;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:34.62:0,35,309	0/0:8,0:8:23.92:0,24,199	0/0:23,0:18:5.21:0,5,89	0/1:24,1:12:8.82:9,0,55	1/1:5,19:24:5.06:510,5,0	1/1:5,12:17:36.10:397,36,0	1/1:3,6:9:12.03:133,12,0	1/1:9,15:24:23.60:462,24,0	1/1:2,5:7:15.04:166,15,0	1/1:4,15:19:48.13:525,48,0	1/1:3,17:20:48.12:521,48,0	0/0:15,0:15:26.11:0,26,233	0/0:14,0:14:17.45:0,17,177	1/1:4,7:10:18.05:199,18,0	1/1:0,15:15:42.11:464,42,0	0/0:9,0:9:26.99:0,27,234	0/0:20,0:20:32.94:0,33,279	0/0:15,0:15:29.95:0,30,254	0/0:3,0:17:23.79:0,24,67	0/0:3,0:12:18.33:0,18,54	0/0:1,0:6:6.11:0,6,18	0/0:6,0:6:9:0,9,78	0/0:14,0:14:14.77:0,15,130	0/0:3,0:3:9:0,9,78	0/1:10,15:26:4.15:397,0,4	1/1:5,16:22:50.97:545,51,0	0/0:5,0:33:61.11:0,61,179	1/1:5,7:12:21.06:232,21,0
chr10	54821653	.	CTCT	C	6169.15	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-6.009;DP=770;FS=4.880;HRun=0;HaplotypeScore=245.0142;InbreedingCoeff=0.9995;MQ=68.85;MQ0=0;MQRankSum=-5.714;QD=40.32;ReadPosRankSum=3.536;VQSLOD=4.8493;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,99,2187	1/1:0,9:9:24.08:400,24,0	0/0:20,0:20:54.19:0,54,1218	0/0:23,0:23:54.15:0,54,1112	0/0:26,0:26:78.25:0,78,1700	0/0:19,0:19:51.17:0,51,1156	0/0:33,0:33:99:0,99,2214	0/0:39,0:39:99:0,114,2508	0/0:28,0:28:81.25:0,81,1721	0/0:27,0:27:81.28:0,81,1834	0/0:31,0:31:93.32:0,93,2077	0/0:33,0:33:96.29:0,96,2077	0/0:41,0:41:99:0,123,2655	0/0:37,0:37:99:0,108,2445	0/0:39,0:39:99:0,117,2648	1/1:0,20:20:54.18:899,54,0	0/0:38,0:38:99:0,111,2503	0/0:23,0:23:63.22:0,63,1404	1/1:4,21:25:63.20:1024,63,0	1/1:0,30:30:75.26:1249,75,0	1/1:4,26:30:66.23:1099,66,0	0/0:19,0:19:57.20:0,57,1265	0/0:21,0:21:60.68:0,61,1359	0/0:30,0:30:90.23:0,90,1942	0/0:17,0:17:51.18:0,51,1151	0/0:27,0:27:75.26:0,75,1698	1/1:5,34:39:90.31:1498,90,0	0/0:10,0:10:30.09:0,30,633
chr10	54822524	.	C	CTTT	9975.14	PASS	AB=0.579;AC=36;AF=0.643;AN=56;BaseQRankSum=-12.680;DP=671;FS=2.263;HRun=11;HaplotypeScore=151.8181;InbreedingCoeff=0.6081;MQ=65.14;MQ0=3;MQRankSum=5.721;QD=22.32;ReadPosRankSum=1.863;VQSLOD=2.4361;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,0:18:16.83:70,17,0	0/0:3,0:15:38.17:0,38,232	0/0:51,0:29:0.39:0,0,347	0/0:35,0:20:32.07:0,32,280	1/1:4,25:32:75.08:1212,75,0	1/1:4,13:23:36.08:606,36,0	1/1:4,7:11:15.05:269,15,0	1/1:13,15:33:72.13:1135,72,0	1/1:6,10:16:24.08:449,24,0	1/1:4,25:35:83.62:1262,84,0	1/1:6,29:40:93.21:1523,93,0	0/1:3,0:19:13.35:13,0,43	0/1:6,0:24:5.82:6,0,102	1/1:0,7:10:27.09:506,27,0	1/1:9,16:26:36.06:573,36,0	0/0:4,0:23:54.52:0,55,317	1/1:5,0:20:6.89:45,7,0	1/1:4,0:14:5.70:18,6,0	0/0:5,0:27:69.70:0,70,404	0/0:7,0:28:70.08:0,70,412	0/0:2,0:6:9.91:0,10,51	0/1:11,0:26:59.24:59,0,108	0/1:6,0:28:18.56:19,0,98	1/1:2,0:7:1.25:6,1,0	1/1:3,15:21:51.11:858,51,0	1/1:5,17:25:60.12:926,60,0	0/0:6,0:32:81.88:0,82,489	1/1:7,5:13:27.07:421,27,0
chr10	54822539	.	GT	G	2637.98	PASS	AB=0.541;AC=11;AF=0.196;AN=56;BaseQRankSum=-1.652;DP=651;FS=0.000;HRun=10;HaplotypeScore=144.2312;InbreedingCoeff=0.9095;MQ=64.25;MQ0=2;MQRankSum=-8.656;QD=19.26;ReadPosRankSum=3.899;VQSLOD=2.4308;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:49.33:0,49,512	1/1:2,15:17:44.98:390,45,0	0/0:52,0:29:21.30:0,21,332	0/0:34,0:17:15.50:0,16,181	0/0:31,0:31:68.41:0,68,654	0/0:21,0:21:32.11:0,32,280	0/0:11,0:10:21.06:0,21,232	0/0:28,0:28:37.47:0,37,385	0/0:13,0:13:23.22:0,23,214	0/0:36,1:35:51.58:0,52,694	0/0:39,1:40:54.27:0,54,714	0/0:20,0:21:49.76:0,50,479	0/0:20,0:20:28.28:0,28,319	0/0:12,0:12:17.45:0,17,157	0/0:21,0:21:39:0,39,380	0/1:3,17:20:0.48:386,0,0	0/0:16,0:16:19.49:0,19,409	0/0:17,0:17:6.84:0,7,302	1/1:10,22:31:38.99:564,39,0	1/1:6,22:28:18.04:514,18,0	1/1:1,7:8:21:182,21,0	0/0:24,0:23:57.02:0,57,590	0/0:32,0:33:93.04:0,93,994	0/0:6,0:6:15.04:0,15,166	0/0:18,1:20:24.11:0,24,433	0/0:25,0:25:70.07:0,70,716	1/1:3,29:31:89.98:780,90,0	0/0:12,0:12:24.06:0,24,263
chr10	54823049	.	C	CA	26942.54	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-4.541;DP=726;FS=1.943;HRun=2;HaplotypeScore=95.4218;InbreedingCoeff=0.9999;MQ=80.75;MQ0=0;MQRankSum=-10.980;QD=39.74;ReadPosRankSum=5.211;VQSLOD=4.6538;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,37:37:99:1512,105,0	1/1:1,12:13:36.12:519,36,0	0/0:28,0:28:81.02:0,81,921	0/0:20,0:20:48.15:0,48,592	1/1:3,37:40:99:1598,111,0	1/1:0,29:29:75.25:1080,75,0	1/1:0,23:23:60.20:864,60,0	1/1:4,37:41:99:1619,114,0	1/1:0,21:21:57.19:821,57,0	1/1:3,31:34:96.29:1360,96,0	1/1:2,21:23:63.21:907,63,0	1/1:1,18:19:54.18:778,54,0	1/1:2,27:29:78.16:1121,78,0	1/1:1,21:22:54.18:778,54,0	1/1:1,27:28:78.26:1124,78,0	1/1:1,24:25:69.23:994,69,0	1/1:0,28:28:81.27:1167,81,0	1/1:0,13:13:36.08:495,36,0	1/1:0,18:18:54.17:751,54,0	1/1:0,19:19:57.15:797,57,0	1/1:2,32:34:90.30:1296,90,0	1/1:1,26:27:66.22:951,66,0	1/1:0,29:29:81.27:1166,81,0	1/1:0,24:24:66.19:928,66,0	1/1:0,23:23:69.23:994,69,0	1/1:1,26:27:81.25:1130,81,0	1/1:0,28:29:84.28:1200,84,0	1/1:0,23:23:69.23:994,69,0
chr10	54823742	.	G	GA	5027.55	PASS	AB=0.600;AC=43;AF=0.768;AN=56;BaseQRankSum=5.191;DP=572;FS=1.557;HRun=12;HaplotypeScore=89.3694;InbreedingCoeff=0.8288;MQ=68.77;MQ0=1;MQRankSum=-3.176;QD=11.03;ReadPosRankSum=-2.774;VQSLOD=3.9804;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,30:39:36.06:463,36,0	1/1:0,1:7:11.45:60,11,0	0/0:21,0:14:19.71:0,20,109	0/0:8,0:9:0.12:0,0,19	1/1:7,0:18:31.51:169,32,0	1/1:7,0:13:22.56:111,23,0	1/1:9,0:25:34.75:259,35,0	1/1:16,0:32:51.96:245,52,0	1/1:3,1:30:56.98:300,57,0	1/1:8,0:19:34.30:186,34,0	1/1:6,0:13:29.08:169,29,0	1/1:6,23:30:29.88:277,30,0	1/1:15,19:34:16.92:632,17,0	1/1:4,2:15:20.18:121,20,0	1/1:3,0:20:25.69:134,26,0	1/1:6,1:13:32.03:205,32,0	1/1:5,21:28:15.48:375,15,0	1/1:9,17:27:23:372,23,0	0/0:18,0:18:12.99:0,13,247	0/0:28,0:28:58.95:0,59,417	0/0:17,2:20:8.60:0,9,217	0/1:5,5:15:0.19:62,0,0	1/1:1,11:14:26.04:271,26,0	1/1:1,11:12:18.03:175,18,0	1/1:4,0:16:19.32:104,19,0	1/1:8,1:28:56.58:309,57,0	0/0:15,1:17:11.62:0,12,239	1/1:2,0:8:5.68:29,6,0
chr10	54824184	.	T	TG	26795.38	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-15.189;DP=754;FS=0.688;HRun=0;HaplotypeScore=60.3203;InbreedingCoeff=0.9991;MQ=89.24;MQ0=0;MQRankSum=-6.283;QD=44.44;ReadPosRankSum=5.699;VQSLOD=4.7638;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,49:51:99:2300,144,0	1/1:0,7:7:21.07:335,21,0	0/0:29,0:29:84.20:0,84,1111	0/0:26,0:26:73.14:0,73,962	1/1:0,20:20:57.19:911,57,0	1/1:0,22:22:63.21:1006,63,0	1/1:1,41:42:99:1726,108,0	1/1:0,30:30:90.28:1390,90,0	1/1:1,36:37:99:1677,105,0	1/1:0,27:27:81.25:1268,81,0	1/1:0,16:16:48.16:766,48,0	1/1:0,44:44:99:2061,129,0	1/1:0,40:40:99:1867,117,0	1/1:3,22:25:60.20:958,60,0	1/1:0,25:25:69.24:1103,69,0	1/1:0,22:22:66.23:1055,66,0	1/1:0,30:30:75.26:1198,75,0	1/1:0,31:31:87.30:1390,87,0	0/0:25,0:25:72.22:0,72,974	0/0:23,0:23:69.23:0,69,964	0/0:24,0:24:69.17:0,69,924	1/1:1,23:24:69.23:1100,69,0	1/1:1,15:16:42.06:640,42,0	1/1:0,31:31:81.28:1294,81,0	1/1:1,20:21:60.20:958,60,0	1/1:0,29:29:87.22:1314,87,0	0/0:24,0:24:72.24:0,72,1005	1/1:0,13:13:30.10:479,30,0
chr10	54825093	.	CCACACA	C	2340.90	PASS	AB=0.683;AC=28;AF=0.519;AN=54;BaseQRankSum=-2.138;DP=414;FS=11.181;HRun=0;HaplotypeScore=98.7983;InbreedingCoeff=0.5779;MQ=57.72;MQ0=26;MQRankSum=-2.421;QD=11.25;ReadPosRankSum=1.535;VQSLOD=1.7067;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:1,0:21:2.55:0,3,79	0/0:3,0:7:11.68:0,12,123	0/0:22,0:7:0:0,0,0	./.	1/1:8,10:19:25.29:187,25,0	0/1:10,9:18:5.92:170,0,6	1/1:7,5:10:5.95:79,6,0	0/0:25,0:24:3.63:0,4,10	1/1:4,4:10:15.05:265,15,0	1/1:11,1:11:6.02:95,6,0	1/1:10,1:12:2.84:14,3,0	0/0:2,0:10:2.82:0,3,70	0/0:4,0:12:3.01:0,3,83	1/1:4,5:8:14.98:260,15,0	1/1:7,8:15:18.01:302,18,0	0/0:12,0:16:10.68:0,11,242	0/0:2,0:24:18.06:0,18,482	0/0:4,0:10:9.03:0,9,255	1/1:9,3:12:9.03:174,9,0	1/1:7,9:15:25.96:237,26,0	1/1:13,0:10:7.33:28,7,0	0/0:2,0:9:6.02:0,6,143	0/0:2,0:15:6.02:0,6,141	0/0:10,0:11:6:0,6,96	1/1:8,6:14:11.99:202,12,0	1/1:12,3:16:7.82:167,8,0	1/1:10,5:14:15.05:288,15,0	0/1:6,5:10:16.91:53,0,17
chr10	54825507	.	CAG	C	17679.11	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=9.919;DP=555;FS=1.804;HRun=0;HaplotypeScore=68.4411;InbreedingCoeff=0.9943;MQ=78.53;MQ0=3;MQRankSum=-1.543;QD=39.91;ReadPosRankSum=2.342;VQSLOD=6.6342;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,30:30:72.24:1102,72,0	1/1:0,9:9:27.09:413,27,0	0/0:17,0:17:42.14:0,42,711	0/0:8,0:8:14.53:0,15,233	1/1:0,27:27:75.13:1070,75,0	1/1:1,22:23:60.20:918,60,0	1/1:0,11:11:30.10:459,30,0	1/1:1,30:31:90.28:1333,90,0	1/1:0,31:31:75.25:1148,75,0	1/1:1,23:24:69.17:989,69,0	1/1:1,23:24:66.09:921,66,0	1/1:1,11:12:33.11:505,33,0	1/1:0,22:22:66.22:1010,66,0	1/1:0,16:16:36.12:551,36,0	1/1:0,23:23:60.20:918,60,0	1/1:1,21:20:51.17:781,51,0	1/1:0,20:20:45.15:689,45,0	1/1:0,17:17:48.16:730,48,0	0/0:15,0:15:45.15:0,45,857	0/0:21,0:21:60.21:0,60,1156	0/0:21,0:21:63.20:0,63,1184	1/1:0,22:22:57.19:862,57,0	1/1:0,14:14:33:504,33,0	1/1:1,15:16:42.14:643,42,0	1/1:0,18:18:51.17:781,51,0	1/1:0,25:24:72.22:1076,72,0	0/0:30,0:29:90.31:0,90,1715	1/1:0,6:6:18.06:275,18,0
chr10	54825656	.	C	CA	20141.73	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=11.007;DP=641;FS=3.267;HRun=2;HaplotypeScore=119.3725;InbreedingCoeff=0.9981;MQ=85.95;MQ0=0;MQRankSum=-3.942;QD=44.07;ReadPosRankSum=3.421;VQSLOD=4.1012;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,35:35:90.31:1439,90,0	1/1:0,9:9:27.09:432,27,0	0/0:18,0:18:48.16:0,48,659	0/0:23,0:23:66.65:0,67,858	1/1:0,34:34:93.32:1485,93,0	1/1:0,22:22:63.21:1007,63,0	1/1:1,21:22:60.20:959,60,0	1/1:3,26:29:84.22:1251,84,0	1/1:0,28:28:78.27:1247,78,0	1/1:0,21:21:63.20:986,63,0	1/1:2,22:24:63.21:1007,63,0	1/1:0,14:14:36.12:576,36,0	1/1:0,23:23:66.23:1055,66,0	1/1:2,18:20:51.17:798,51,0	1/1:0,20:20:57.19:910,57,0	1/1:1,18:19:48.16:767,48,0	1/1:0,18:18:48.16:767,48,0	1/1:0,15:15:39.13:623,39,0	0/0:27,0:27:78.26:0,78,1091	0/0:41,0:41:99:0,123,1681	0/0:33,0:33:99:0,99,1385	1/1:1,25:26:75.26:1198,75,0	1/1:1,17:18:54.18:848,54,0	1/1:0,12:12:33.11:528,33,0	1/1:1,18:19:57.19:898,57,0	1/1:1,22:23:69.19:1072,69,0	0/0:42,0:42:99:0,126,1726	1/1:0,6:6:18.06:288,18,0
chr10	54828009	.	TTTTG	T	1453.13	PASS	AB=0.982;AC=27;AF=0.482;AN=56;BaseQRankSum=-3.077;DP=402;FS=31.949;HRun=0;HaplotypeScore=92.1468;InbreedingCoeff=-0.4585;MQ=64.43;MQ0=1;MQRankSum=-3.193;QD=4.34;ReadPosRankSum=-0.452;VQSLOD=0.3047;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:20,0:20:37.50:37,0,321	0/1:4,0:4:7.34:7,0,39	0/0:19,0:13:14.86:0,15,195	0/1:13,0:9:8.74:9,0,111	0/1:25,1:26:10.75:180,0,11	0/1:20,0:20:15.79:92,0,16	0/1:10,0:10:7.20:67,0,7	0/1:19,2:21:3.17:254,0,3	1/1:10,0:10:5.57:30,6,0	1/1:14,1:15:6.37:127,6,0	0/1:15,1:16:41.78:148,0,42	0/1:14,0:14:13.09:13,0,252	0/1:15,0:15:12.71:13,0,270	0/1:8,0:8:13.66:22,0,14	0/1:8,1:9:19.22:69,0,19	0/0:10,0:9:23.97:0,24,208	0/1:10,0:10:5.05:5,0,111	0/1:12,0:12:17.89:18,0,147	0/1:20,0:20:73.84:74,0,427	0/1:31,0:29:37.84:38,0,546	0/1:11,0:11:42.58:43,0,181	0/0:11,0:11:7.72:0,8,230	0/1:13,0:13:66.93:67,0,148	0/1:7,0:6:27.21:27,0,28	0/1:9,1:10:20.59:84,0,21	0/1:15,0:15:13.24:130,0,13	0/0:27,0:27:13.80:0,14,495	1/1:5,0:5:10.19:60,10,0
chr10	54828010	.	TTTG	T	2903.37	PASS	AB=0.998;AC=37;AF=0.661;AN=56;BaseQRankSum=-8.288;DP=404;FS=23.925;HRun=0;HaplotypeScore=82.0644;InbreedingCoeff=-0.0772;MQ=63.71;MQ0=1;MQRankSum=-2.854;QD=7.98;ReadPosRankSum=-2.088;VQSLOD=0.6922;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:20,0:20:79.07:79,0,129	0/1:4,0:4:19.07:38,0,19	0/0:19,0:13:12.48:0,12,152	0/1:11,0:8:12.08:12,0,73	1/1:22,4:26:49.05:363,49,0	1/1:7,12:19:24.74:225,25,0	1/1:8,2:10:14.88:125,15,0	1/1:19,2:21:43.89:382,44,0	1/1:2,8:10:6.02:78,6,0	1/1:5,10:15:30.05:280,30,0	1/1:15,2:17:28.95:264,29,0	0/1:14,0:14:20.40:20,0,98	0/1:16,0:16:38.15:38,0,136	1/1:3,5:8:6.02:78,6,0	1/1:8,2:10:23.70:194,24,0	0/0:10,0:9:19.38:0,19,90	0/1:10,0:10:22.18:22,0,45	0/1:12,0:12:26.04:26,0,67	0/1:21,0:21:99:102,0,215	0/1:31,1:30:93.15:93,0,241	0/1:11,0:11:48.69:49,0,64	0/0:11,0:11:6:0,6,115	0/1:13,0:13:68.57:69,0,69	0/1:7,0:6:13.82:27,0,14	1/1:9,1:10:19.78:159,20,0	1/1:12,3:15:24.32:211,24,0	0/1:27,0:27:19.20:19,0,198	1/1:4,1:5:14.93:124,15,0
chr10	54828011	.	TTG	T	3207.28	PASS	AB=1.000;AC=40;AF=0.714;AN=56;BaseQRankSum=-2.371;DP=396;FS=24.564;HRun=0;HaplotypeScore=73.7305;InbreedingCoeff=-0.1504;MQ=62.81;MQ0=1;MQRankSum=1.072;QD=8.46;ReadPosRankSum=-0.535;VQSLOD=1.4756;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:20,0:20:8.55:113,0,9	0/1:4,0:4:3.85:43,0,4	0/0:17,0:12:10.90:0,11,110	0/1:11,0:8:24.48:24,0,60	1/1:22,1:23:51:341,51,0	1/1:17,1:18:25.61:176,26,0	1/1:9,0:9:14.90:110,15,0	1/1:19,0:19:47.64:375,48,0	1/1:10,0:10:5.99:48,6,0	1/1:13,2:15:29.86:241,30,0	1/1:16,1:17:30.34:235,30,0	0/1:16,0:16:2.63:122,0,3	0/1:15,0:15:24.69:71,0,25	1/1:8,0:8:5.99:48,6,0	1/1:10,0:10:25.62:177,26,0	1/1:10,0:9:2.49:11,2,0	0/1:11,0:11:6.55:49,0,7	0/1:12,0:12:3.81:56,0,4	0/1:22,0:22:51.14:164,0,51	0/1:33,0:31:10.06:181,0,10	0/1:11,0:11:1.21:79,0,1	0/1:10,0:10:13.44:13,0,21	0/1:13,0:13:4.72:86,0,5	0/1:7,0:6:0.06:29,0,0	1/1:10,0:10:23.82:178,24,0	1/1:13,0:13:25.61:178,26,0	0/1:27,0:27:10.48:99,0,10	1/1:5,0:5:14.91:109,15,0
chr10	54828721	.	CAT	C	2666.05	PASS	AB=0.997;AC=49;AF=0.907;AN=54;BaseQRankSum=-1.780;DP=465;FS=0.000;HRun=0;HaplotypeScore=104.9590;InbreedingCoeff=0.0165;MQ=49.29;MQ0=36;MQRankSum=2.578;QD=5.94;ReadPosRankSum=0.788;VQSLOD=3.1643;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:15:13.69:104,14,0	1/1:5,0:5:8.99:75,9,0	0/1:60,0:12:0.32:0,0,94	0/1:62,0:15:25.76:26,0,97	1/1:12,2:13:14.87:108,15,0	1/1:7,0:7:2.99:24,3,0	1/1:13,3:16:18.85:151,19,0	1/1:16,0:11:26.87:213,27,0	1/1:13,4:17:26.65:223,27,0	1/1:15,1:14:35.80:273,36,0	1/1:11,2:11:6:51,6,0	1/1:0,9:9:2.97:20,3,0	1/1:8,1:9:7.80:69,8,0	1/1:10,2:12:20.76:149,21,0	1/1:15,2:17:18.79:139,19,0	1/1:13,0:13:17.91:140,18,0	1/1:15,1:17:17.55:114,18,0	1/1:6,2:8:19.59:146,20,0	0/1:15,0:14:38.46:77,0,38	0/1:22,0:21:0.29:56,0,0	1/1:13,0:11:8.73:72,9,0	./.	1/1:11,0:10:8.98:73,9,0	1/1:18,0:18:10.80:87,11,0	1/1:11,1:11:8.93:66,9,0	1/1:13,1:12:28.60:220,29,0	0/1:15,0:13:54.56:55,0,68	1/1:0,1:2:5.99:52,6,0
chr10	54828733	.	CAA	C	2466.52	PASS	AB=1.000;AC=48;AF=0.923;AN=52;BaseQRankSum=-0.346;DP=465;FS=0.000;HRun=3;HaplotypeScore=110.5357;InbreedingCoeff=-0.1381;MQ=43.90;MQ0=30;MQRankSum=2.859;QD=5.67;ReadPosRankSum=0.761;VQSLOD=-0.1017;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:17:2.85:44,3,0	1/1:7,0:7:8.54:74,9,0	0/1:37,0:8:24.05:24,0,98	0/1:49,0:10:22.26:22,0,44	1/1:14,1:14:14.87:108,15,0	./.	1/1:20,1:20:26.87:214,27,0	1/1:20,0:12:23.79:170,24,0	1/1:15,2:17:27.44:228,27,0	1/1:19,0:17:36.64:283,37,0	1/1:14,2:14:6:51,6,0	1/1:11,1:12:2.89:20,3,0	1/1:9,1:10:9.41:70,9,0	1/1:9,3:12:17.80:126,18,0	1/1:14,2:16:17.90:136,18,0	1/1:13,0:13:8.93:67,9,0	1/1:19,1:20:11.62:72,12,0	1/1:6,2:8:13.64:102,14,0	0/1:18,0:17:30.24:100,0,30	1/1:21,1:21:5.50:86,6,0	1/1:3,10:11:3.88:26,4,0	./.	1/1:9,0:8:5.99:48,6,0	1/1:21,0:21:8.89:72,9,0	1/1:10,1:10:8.99:74,9,0	1/1:13,1:13:33.69:256,34,0	0/1:16,0:14:42.89:56,0,43	1/1:1,1:2:5.99:52,6,0
chr10	54828749	.	CACACACACAGAGAGAG	C	1302.04	PASS	AB=0.969;AC=19;AF=0.380;AN=50;BaseQRankSum=4.581;DP=362;FS=4.770;HRun=0;HaplotypeScore=145.2196;InbreedingCoeff=0.1910;MQ=45.14;MQ0=12;MQRankSum=-4.008;QD=11.03;ReadPosRankSum=2.450;VQSLOD=1.9960;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	1/1:2,0:2:3.01:54,3,0	0/0:28,0:12:31.25:0,31,1627	0/0:26,0:14:42.11:0,42,1506	0/1:15,0:14:65.79:132,0,66	0/0:13,0:13:2.98:0,3,27	0/0:19,0:18:14.59:0,15,280	0/0:21,0:15:35.97:0,36,340	0/1:11,0:11:24.56:203,0,25	0/0:16,0:15:30.47:0,30,315	1/1:13,0:14:3:102,3,0	1/1:6,1:7:6.02:175,6,0	1/1:4,1:5:6.02:164,6,0	0/1:6,0:7:21:21,0,63	0/1:9,0:10:17.66:89,0,18	1/1:10,0:10:2.68:11,3,0	1/1:11,1:12:3.01:112,3,0	0/1:6,0:6:5.93:314,0,6	0/0:13,0:13:35.62:0,36,910	0/0:21,0:20:57.20:0,57,1177	0/0:11,0:10:6.63:0,7,165	./.	0/0:7,0:7:1.55:0,2,4	./.	0/0:8,0:8:8.79:0,9,69	0/1:14,0:13:20.74:21,0,174	0/0:16,0:15:36.12:0,36,1019	0/1:5,0:5:55.73:58,0,56
chr10	54828751	.	CACACACAGAG	C	3794.37	PASS	AB=0.940;AC=38;AF=0.792;AN=48;BaseQRankSum=0.872;DP=363;FS=4.533;HRun=0;HaplotypeScore=116.5984;InbreedingCoeff=0.2526;MQ=46.01;MQ0=9;MQRankSum=2.251;QD=14.43;ReadPosRankSum=2.961;VQSLOD=2.0243;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	1/1:3,0:3:5.95:51,6,0	0/0:24,0:12:31.56:0,32,934	0/0:25,0:14:40.38:0,40,936	1/1:15,1:15:18.02:261,18,0	1/1:13,0:13:2.99:24,3,0	1/1:19,1:19:43.55:418,44,0	1/1:23,0:17:41.66:412,42,0	1/1:9,2:11:20.03:404,20,0	1/1:17,0:16:11.94:422,12,0	1/1:14,1:15:2.70:86,3,0	1/1:7,0:7:5.23:62,5,0	1/1:5,0:5:5.98:87,6,0	1/1:6,1:7:14.98:161,15,0	1/1:8,1:9:12.04:226,12,0	./.	1/1:12,0:12:3.01:50,3,0	0/1:5,0:6:5.93:142,0,6	0/1:11,0:12:87:87,0,275	0/1:21,0:22:7.39:7,0,302	0/1:10,0:9:2.56:37,0,3	./.	0/1:7,0:7:0:0,0,0	./.	1/1:11,0:10:14.97:187,15,0	1/1:13,1:13:12.44:354,12,0	0/1:15,0:15:64.08:64,0,214	1/1:5,1:6:17.97:254,18,0
chr10	54828757	.	CAGAGAGAG	C	868.03	PASS	AB=0.855;AC=20;AF=0.417;AN=48;BaseQRankSum=4.258;DP=387;FS=0.918;HRun=0;HaplotypeScore=125.7242;InbreedingCoeff=0.3146;MQ=51.34;MQ0=7;MQRankSum=-4.574;QD=6.48;ReadPosRankSum=3.668;VQSLOD=2.3720;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	1/1:3,0:3:6.02:136,6,0	0/0:31,0:19:52.69:0,53,2202	0/0:29,0:18:51.17:0,51,1864	0/1:18,0:17:20.94:21,0,29	0/0:14,0:14:2.91:0,3,25	0/0:21,0:20:37.14:0,37,247	0/0:7,0:20:34.99:0,35,220	0/1:12,0:12:9.26:103,0,9	0/0:19,0:18:11.69:0,12,174	1/1:4,0:15:2.84:39,3,0	1/1:8,0:8:9.03:232,9,0	1/1:1,3:4:6.02:131,6,0	0/0:6,0:6:3.18:0,3,19	1/1:10,0:10:0.48:32,0,0	./.	1/1:3,10:13:3.01:62,3,0	1/1:3,3:6:9:219,9,0	0/1:12,0:12:1.68:2,0,307	0/0:22,0:21:32.67:0,33,367	0/0:9,0:9:4.71:0,5,53	./.	./.	0/1:2,12:14:0:0,0,0	0/0:12,0:11:9.32:0,9,50	0/1:4,0:12:14.95:15,0,98	0/0:17,0:16:4.45:0,4,491	0/1:6,0:6:26.02:26,0,55
chr10	54829735	.	TGTG	T	3556	PASS	AC=40;AF=0.833;AN=48;BaseQRankSum=5.524;DP=900;FS=1.424;HRun=0;HaplotypeScore=21.8702;InbreedingCoeff=0.5550;MQ=12.51;MQ0=464;MQRankSum=-1.112;QD=6.04;ReadPosRankSum=-1.076;VQSLOD=1.4436;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:63,7:7:18.06:307,18,0	1/1:3,5:2:3.01:51,3,0	./.	./.	1/1:21,13:5:3.01:51,3,0	1/1:22,7:7:18.06:306,18,0	1/1:17,2:2:3.01:51,3,0	1/1:18,9:10:24.55:389,25,0	1/1:21,6:5:6.02:102,6,0	1/1:46,11:2:6.02:102,6,0	1/1:10,12:3:6.02:102,6,0	1/1:14,4:4:12.04:204,12,0	1/1:22,10:11:27.09:460,27,0	1/1:17,10:10:9.03:153,9,0	1/1:25,7:6:3.01:51,3,0	1/1:20,8:8:21.07:358,21,0	./.	1/1:22,2:2:3.01:51,3,0	0/0:32,0:5:9.03:0,9,207	0/0:57,0:24:36.12:0,36,798	0/0:45,0:2:6.02:0,6,138	1/1:21,8:3:3.01:51,3,0	1/1:18,10:5:9.03:153,9,0	./.	1/1:10,9:5:6.02:102,6,0	1/1:24,10:9:27.09:460,27,0	0/0:67,0:8:15.05:0,15,345	1/1:17,8:6:3.01:51,3,0
chr10	54829973	.	C	CCTT	8138.13	PASS	AC=46;AF=0.958;AN=48;BaseQRankSum=-1.732;DP=658;FS=3.809;HRun=0;HaplotypeScore=25.2284;InbreedingCoeff=0.2967;MQ=15.53;MQ0=282;MQRankSum=-1.150;QD=13.72;ReadPosRankSum=0.679;VQSLOD=3.9923;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:30,6:3:6.02:135,6,0	1/1:11,4:5:9.03:173,9,0	./.	./.	1/1:16,3:6:15.05:322,15,0	1/1:10,8:6:12.04:271,12,0	1/1:12,2:1:3.01:68,3,0	./.	1/1:8,8:9:15.05:339,15,0	1/1:29,3:4:12.04:271,12,0	1/1:29,9:9:27.09:606,27,0	1/1:6,8:7:21.07:474,21,0	1/1:13,10:8:24.08:542,24,0	1/1:10,7:5:9.03:203,9,0	1/1:20,8:9:24.08:542,24,0	1/1:15,8:7:21.07:474,21,0	1/1:33,5:4:6.02:135,6,0	1/1:35,1:3:3.01:68,3,0	1/1:11,2:1:3.01:68,3,0	1/1:30,15:17:47.97:907,48,0	./.	1/1:10,6:4:12.04:271,12,0	1/1:23,6:8:18.06:405,18,0	1/1:32,5:5:6.02:135,6,0	1/1:22,11:16:36.12:809,36,0	1/1:18,10:9:24.08:515,24,0	1/1:18,7:9:18.06:407,18,0	0/0:14,1:1:3.01:0,3,50
chr10	54830515	.	AG	A	334.11	PASS	AC=8;AF=0.148;AN=54;BaseQRankSum=2.714;DP=119;FS=4.626;HRun=1;HaplotypeScore=21.4338;InbreedingCoeff=0.4664;MQ=60.93;MQ0=6;MQRankSum=1.496;QD=20.88;ReadPosRankSum=1.065;VQSLOD=3.6551;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:27.09:0,27,390	0/0:1,0:1:3.01:0,3,45	0/0:5,1:3:0.34:0,0,59	0/0:11,0:4:6.86:0,7,59	0/0:6,0:6:12.04:0,12,183	0/0:2,0:2:6.02:0,6,96	0/0:7,0:7:20.90:0,21,270	0/0:8,0:6:18.05:0,18,267	0/0:4,0:4:12.04:0,12,169	0/0:3,0:3:9.01:0,9,119	0/0:8,0:8:14.92:0,15,236	0/0:3,0:3:9.03:0,9,129	./.	0/0:3,0:3:9.03:0,9,128	0/0:1,0:1:2.94:0,3,18	0/0:1,0:1:3.01:0,3,46	0/0:3,0:3:9.03:0,9,140	0/0:2,0:2:6.02:0,6,84	1/1:2,1:1:3.01:42,3,0	1/1:0,4:4:6.02:84,6,0	1/1:0,8:8:21.07:294,21,0	0/0:4,0:4:9.03:0,9,139	0/0:4,0:4:3.01:0,3,48	0/0:3,0:3:9.03:0,9,118	0/0:6,0:6:18.06:0,18,275	0/0:4,0:3:6.02:0,6,96	1/1:0,1:1:3.01:42,3,0	0/0:1,0:1:3.01:0,3,48
chr10	54832049	.	G	GT	7983.64	PASS	AB=1.000;AC=43;AF=0.796;AN=54;BaseQRankSum=-4.818;DP=348;FS=3.182;HRun=7;HaplotypeScore=49.2124;InbreedingCoeff=0.8229;MQ=71.01;MQ0=0;MQRankSum=-1.689;QD=28.82;ReadPosRankSum=1.495;VQSLOD=5.4985;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,16:18:48.15:580,48,0	1/1:1,7:8:18.06:217,18,0	0/0:6,0:6:15.28:0,15,126	0/1:10,0:9:5.12:5,0,114	1/1:3,29:32:81.25:979,81,0	1/1:2,15:17:45.14:544,45,0	1/1:0,6:6:18.06:217,18,0	1/1:4,20:24:57.17:689,57,0	1/1:2,1:3:3.01:36,3,0	1/1:1,11:11:36.11:433,36,0	1/1:2,12:14:33.10:394,33,0	1/1:1,9:10:24.07:290,24,0	1/1:2,3:5:6.02:72,6,0	1/1:0,9:9:24.07:290,24,0	1/1:0,8:8:24.07:290,24,0	1/1:1,4:5:12.04:145,12,0	1/1:1,14:15:39.12:471,39,0	1/1:3,6:10:20.93:232,21,0	0/0:21,0:21:63.10:0,63,608	0/0:19,0:19:51.08:0,51,493	0/0:7,0:7:15.02:0,15,145	1/1:1,4:5:9.03:109,9,0	1/1:0,6:6:18.06:217,18,0	1/1:0,5:5:12.04:145,12,0	1/1:2,25:27:66.17:782,66,0	1/1:3,25:27:72.19:847,72,0	0/0:17,0:17:48.06:0,48,457	./.
chr10	54832744	.	TTA	T	14113.01	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=11.259;DP=737;FS=8.582;HRun=0;HaplotypeScore=172.9438;InbreedingCoeff=0.9963;MQ=77.39;MQ0=2;MQRankSum=-5.148;QD=27.04;ReadPosRankSum=6.285;VQSLOD=5.6439;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,39:39:63.20:817,63,0	1/1:0,6:6:15.05:191,15,0	0/0:39,0:37:90.19:0,90,1264	0/0:36,0:30:68.38:0,68,848	1/1:1,21:22:42.14:552,42,0	1/1:1,16:17:36.12:474,36,0	1/1:0,19:19:27.09:359,27,0	1/1:3,14:17:40.82:421,41,0	1/1:1,26:27:44.54:839,45,0	1/1:4,22:26:63.46:813,63,0	1/1:3,16:19:33.10:423,33,0	1/1:1,20:21:45.15:588,45,0	1/1:0,29:29:66.11:866,66,0	1/1:0,17:17:36.12:466,36,0	1/1:3,31:34:63.20:821,63,0	1/1:2,20:22:38.66:513,39,0	1/1:0,28:28:51.16:656,51,0	1/1:0,14:14:33.11:425,33,0	0/0:23,0:23:54.11:0,54,345	0/0:28,0:28:62.08:0,62,351	0/0:53,0:52:90.65:0,91,358	1/1:1,35:36:81.26:1058,81,0	1/1:4,15:19:46.04:570,46,0	1/1:8,24:32:77.66:959,78,0	1/1:5,24:29:41.28:769,41,0	1/1:2,31:33:91.39:1135,91,0	0/0:36,0:36:79:0,79,401	1/1:2,14:16:30.10:396,30,0
chr10	54832761	.	TGC	T	19658.63	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-0.685;DP=728;FS=7.477;HRun=0;HaplotypeScore=173.4689;InbreedingCoeff=0.9828;MQ=65.03;MQ0=3;MQRankSum=-2.440;QD=29.12;ReadPosRankSum=6.155;VQSLOD=6.0255;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:38,1:39:85.03:989,85,0	1/1:8,1:8:18.04:210,18,0	0/0:25,0:23:40.98:0,41,544	0/0:28,0:22:13.11:0,13,294	1/1:25,0:25:54.59:649,55,0	1/1:19,0:19:42.57:519,43,0	1/1:29,0:29:52.55:567,53,0	1/1:22,0:22:47.49:496,47,0	1/1:28,0:28:46.48:846,46,0	1/1:27,1:28:71.63:846,72,0	1/1:17,1:18:36.10:450,36,0	1/1:21,0:21:54.14:666,54,0	1/1:28,0:28:69.21:886,69,0	1/1:19,2:21:47.98:548,48,0	1/1:27,1:28:73.75:896,74,0	1/1:22,0:22:51.11:609,51,0	1/1:28,1:29:61.03:737,61,0	1/1:14,0:15:39.49:479,39,0	1/1:1,23:24:69.11:823,69,0	1/1:2,24:26:54.15:733,54,0	1/1:3,49:51:99:1543,114,0	1/1:35,0:35:84.26:1092,84,0	1/1:18,0:18:45.13:578,45,0	1/1:34,0:34:81.74:973,82,0	1/1:28,0:28:45.26:836,45,0	1/1:33,1:34:85.45:1127,85,0	1/1:2,31:33:84.28:1171,84,0	1/1:10,0:10:30.10:390,30,0
chr10	54833257	.	T	TA	4084.25	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-4.098;DP=224;FS=0.842;HRun=4;HaplotypeScore=26.4065;InbreedingCoeff=0.6949;MQ=63.28;MQ0=1;MQRankSum=-1.910;QD=22.44;ReadPosRankSum=0.486;VQSLOD=2.0925;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:12:2.99:23,3,0	1/1:0,2:2:6.02:80,6,0	0/0:7,0:6:18.05:0,18,198	0/0:4,0:2:6:0,6,57	1/1:3,6:7:18.06:241,18,0	1/1:5,7:9:18.05:228,18,0	1/1:1,2:3:6.02:80,6,0	1/1:15,25:37:75.25:1009,75,0	1/1:1,4:5:12.04:161,12,0	1/1:1,4:5:12.04:161,12,0	1/1:0,3:3:9.03:120,9,0	1/1:1,6:6:15.05:202,15,0	1/1:0,0:7:6.02:74,6,0	1/1:2,1:2:3.01:40,3,0	1/1:0,8:8:21.07:278,21,0	1/1:1,5:6:15.05:202,15,0	1/1:3,8:10:18.06:239,18,0	1/1:6,7:12:15.14:202,15,0	0/0:12,0:12:19.14:0,19,234	0/0:4,0:4:9.03:0,9,102	0/0:4,0:4:6.01:0,6,68	1/1:0,2:2:6.02:80,6,0	1/1:0,4:4:6.02:80,6,0	1/1:1,2:3:3.01:40,3,0	1/1:4,1:10:6.02:76,6,0	1/1:1,3:4:9.01:104,9,0	0/0:11,0:10:33.09:0,33,374	1/1:0,10:10:27.09:366,27,0
chr10	54834052	.	G	GC	16880.07	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=0.160;DP=583;FS=1.139;HRun=1;HaplotypeScore=130.6127;InbreedingCoeff=0.9917;MQ=74.59;MQ0=0;MQRankSum=-10.109;QD=39.62;ReadPosRankSum=1.577;VQSLOD=4.4958;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,21:26:60.16:873,60,0	1/1:0,6:6:18.06:269,18,0	0/0:14,0:13:39.11:0,39,481	0/0:23,0:23:44.23:0,44,558	1/1:3,21:24:57.19:852,57,0	1/1:1,25:26:75.25:1121,75,0	1/1:0,13:13:36.12:524,36,0	1/1:4,23:27:78.15:1066,78,0	1/1:2,21:23:66.21:961,66,0	1/1:2,21:23:66.22:969,66,0	1/1:2,22:24:54.14:782,54,0	1/1:0,17:17:48.16:718,48,0	1/1:1,22:23:63.21:941,63,0	1/1:1,13:14:42.14:626,42,0	1/1:2,20:22:60.20:898,60,0	1/1:2,20:22:66.20:948,66,0	1/1:1,15:16:45.15:673,45,0	1/1:0,9:9:24.08:359,24,0	0/0:26,0:26:65.78:0,66,803	0/0:33,0:33:96.27:0,96,1200	0/0:30,0:30:90.29:0,90,1169	1/1:1,15:16:42.14:626,42,0	1/1:1,19:20:54.18:807,54,0	1/1:2,14:16:39.13:583,39,0	1/1:5,18:23:60.15:855,60,0	1/1:4,28:32:84.28:1250,84,0	0/0:30,0:30:90.29:0,90,1168	1/1:0,4:4:12.04:180,12,0
chr10	54834090	.	T	TTCTGCTAC	39911.91	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-0.039;DP=621;FS=1.621;HRun=0;HaplotypeScore=182.4288;InbreedingCoeff=0.9752;MQ=78.71;MQ0=0;MQRankSum=-16.514;QD=84.03;ReadPosRankSum=-0.062;VQSLOD=4.6256;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:15,13:29:48.15:1878,48,0	1/1:0,6:6:18.06:802,18,0	0/0:23,0:23:66.21:0,66,1630	0/0:24,0:24:69.18:0,69,1766	1/1:9,18:31:36.12:1416,36,0	1/1:9,17:27:66.23:2571,66,0	1/1:7,12:20:51.13:1899,51,0	1/1:21,11:33:99:3758,99,0	1/1:9,13:23:48.16:1902,48,0	1/1:7,16:24:63.22:2561,63,0	1/1:14,13:27:36.12:1417,36,0	1/1:12,12:25:57.18:2259,57,0	1/1:8,10:20:54.19:2323,54,0	1/1:7,12:19:42.14:1741,42,0	1/1:6,20:27:66.21:2745,66,0	1/1:5,14:20:48.16:2070,48,0	1/1:4,8:14:24.04:956,24,0	1/1:3,5:8:21.07:831,21,0	0/0:21,0:21:63.22:0,63,1807	0/0:27,0:27:75.26:0,75,2110	0/0:24,0:24:72.25:0,72,1970	1/1:12,11:23:27.09:1202,27,0	1/1:6,15:22:27.08:1042,27,0	1/1:3,11:17:24.08:1062,24,0	1/1:5,19:25:48.16:2050,48,0	1/1:15,16:33:87.27:3284,87,0	0/0:27,0:27:78.25:0,78,2091	1/1:2,0:2:5.99:142,6,0
chr10	54834642	.	GA	G	6962.52	PASS	AB=0.947;AC=30;AF=0.536;AN=56;BaseQRankSum=12.291;DP=634;FS=11.429;HRun=10;HaplotypeScore=95.8609;InbreedingCoeff=0.8605;MQ=71.98;MQ0=0;MQRankSum=1.071;QD=19.34;ReadPosRankSum=5.050;VQSLOD=4.5482;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,31:35:80.96:703,81,0	1/1:1,10:11:26.99:234,27,0	0/1:15,2:17:10.13:10,0,319	0/1:11,0:11:32.66:33,0,70	0/0:32,0:32:69.19:0,69,763	0/0:13,0:13:36.10:0,36,398	0/0:13,0:13:39.05:0,39,410	0/0:35,2:36:46.14:0,46,736	0/0:15,1:16:19.03:0,19,426	0/0:25,1:26:31.10:0,31,571	0/0:22,0:22:49.34:0,49,505	1/1:0,17:17:50.99:443,51,0	1/1:3,16:19:41.99:365,42,0	0/0:19,0:19:54.14:0,54,587	0/0:16,0:16:42.11:0,42,464	1/1:4,22:26:39.32:520,39,0	1/1:0,27:27:71.99:625,72,0	1/1:2,13:15:29.94:260,30,0	1/1:5,24:29:68.97:595,69,0	1/1:4,37:41:99:911,105,0	1/1:3,12:15:18.30:292,18,0	1/1:7,24:31:68.98:599,69,0	1/1:5,24:29:32.71:513,33,0	1/1:0,12:12:32.99:286,33,0	0/0:29,1:31:57.99:0,58,835	0/0:33,1:34:67.16:0,67,942	1/1:2,23:25:65.85:573,66,0	0/0:15,0:15:29.98:0,30,298
chr10	54834790	.	AGGG	A	9825.86	PASS	AB=0.604;AC=30;AF=0.536;AN=56;BaseQRankSum=-12.498;DP=573;FS=5.775;HRun=11;HaplotypeScore=129.2421;InbreedingCoeff=0.8151;MQ=75.58;MQ0=0;MQRankSum=-3.753;QD=28.32;ReadPosRankSum=5.352;VQSLOD=3.2195;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,35:36:96.27:1261,96,0	1/1:0,9:9:24.08:315,24,0	0/0:23,0:18:24.95:0,25,280	0/0:21,0:16:5.02:0,5,324	0/0:5,0:17:14.21:0,14,48	0/0:7,0:21:18.83:0,19,60	0/0:5,0:17:10.85:0,11,24	0/0:13,0:22:9.97:0,10,22	0/0:3,0:12:9.97:0,10,22	0/0:5,0:14:13.25:0,13,31	0/0:7,0:23:20.46:0,20,47	1/1:3,24:27:72.16:946,72,0	1/1:3,17:20:48.13:631,48,0	0/0:3,0:22:19.32:0,19,44	0/0:6,0:23:25.42:0,25,74	1/1:1,15:16:42.13:552,42,0	1/1:4,26:30:72.23:946,72,0	1/1:1,21:22:54.08:670,54,0	1/1:6,15:21:44.69:576,45,0	1/1:3,29:32:84.17:1104,84,0	1/1:2,15:17:27.01:355,27,0	1/1:3,13:16:36.06:473,36,0	1/1:2,27:29:63.09:788,63,0	1/1:1,17:18:45.10:591,45,0	0/0:0,0:10:9.97:0,10,22	0/1:11,1:23:13.94:14,0,58	1/1:5,15:20:44.97:590,45,0	0/1:2,0:11:10.43:14,0,10
chr10	54834800	.	GGT	G	1190.46	PASS	AB=0.954;AC=15;AF=0.268;AN=56;BaseQRankSum=-8.248;DP=566;FS=21.457;HRun=0;HaplotypeScore=145.5523;InbreedingCoeff=0.1812;MQ=74.39;MQ0=0;MQRankSum=1.780;QD=5.67;ReadPosRankSum=1.873;VQSLOD=1.9787;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,108,515	0/0:9,0:9:17.95:0,18,70	0/0:15,0:11:15.31:0,15,154	0/0:24,0:18:13.62:0,14,279	0/1:15,0:15:41.64:104,0,42	0/1:19,0:19:45.09:87,0,45	0/1:18,0:18:56.53:57,0,103	0/1:24,0:24:7.58:8,0,300	0/1:11,2:13:5.86:98,0,6	0/1:12,1:13:58.50:70,0,59	0/1:21,2:23:61.42:216,0,61	0/0:27,0:27:62.65:0,63,292	0/0:22,0:22:43.37:0,43,217	1/1:21,1:22:5.53:161,6,0	1/1:17,1:18:45.74:222,46,0	0/0:18,0:18:44.71:0,45,218	0/0:29,0:29:70.63:0,71,313	0/0:21,0:21:48.51:0,49,208	0/0:17,0:17:40.28:0,40,197	0/0:30,0:30:70.97:0,71,275	0/0:17,0:17:27.80:0,28,135	0/0:14,0:14:21.82:0,22,116	0/0:29,0:29:40.82:0,41,210	0/0:24,0:24:55.71:0,56,301	0/1:14,0:14:37.59:38,0,72	0/1:17,3:20:99:153,0,109	0/0:17,0:17:20.63:0,21,132	1/1:10,1:11:26.88:149,27,0
chr10	54836865	.	GC	G	6378.07	PASS	AB=0.873;AC=30;AF=0.536;AN=56;BaseQRankSum=16.465;DP=691;FS=4.335;HRun=10;HaplotypeScore=119.4090;InbreedingCoeff=0.8252;MQ=72.99;MQ0=0;MQRankSum=0.293;QD=14.50;ReadPosRankSum=5.382;VQSLOD=4.5256;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:41,0:41:99:590,104,0	1/1:3,13:16:38.64:338,39,0	0/0:18,0:17:29.74:0,30,274	0/0:25,0:24:17.74:0,18,297	0/0:24,1:26:30.93:0,31,550	0/0:11,1:12:4.03:0,4,273	0/0:35,2:38:34.94:0,35,816	0/1:22,4:27:65.13:65,0,249	0/0:22,1:23:31.96:0,32,549	0/1:18,3:21:29.98:30,0,383	0/0:13,1:14:33.08:0,33,358	1/1:26,0:26:47.98:323,48,0	1/1:23,0:23:51.97:281,52,0	0/0:16,0:16:30.05:0,30,313	0/0:20,0:20:45.12:0,45,498	1/1:2,32:34:89.98:781,90,0	1/1:37,0:37:97.85:512,98,0	1/1:26,0:26:57.76:311,58,0	1/1:2,18:20:53.97:465,54,0	1/1:3,22:25:59.96:520,60,0	1/1:4,34:38:83.94:729,84,0	1/1:25,0:25:35.97:265,36,0	1/1:24,0:24:32.26:248,32,0	1/1:26,0:26:41.58:270,42,0	0/0:33,1:34:29.33:0,29,759	0/0:21,1:22:19.08:0,19,415	1/1:3,28:31:74.96:651,75,0	0/0:3,0:3:9.02:0,9,100
chr10	54836875	.	CA	C	7625.39	PASS	AB=0.990;AC=22;AF=0.393;AN=56;BaseQRankSum=15.608;DP=671;FS=0.698;HRun=1;HaplotypeScore=112.9109;InbreedingCoeff=0.6615;MQ=76.53;MQ0=0;MQRankSum=-1.160;QD=21.42;ReadPosRankSum=9.528;VQSLOD=4.1891;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,43:43:99:1478,108,0	0/1:14,0:14:9.08:14,0,9	0/0:19,1:19:27.22:0,27,452	0/0:27,0:26:30.56:0,31,362	0/0:24,0:24:56.62:0,57,717	0/0:13,0:13:34.87:0,35,432	0/0:37,0:37:95.30:0,95,1197	0/0:23,0:23:47.90:0,48,477	0/0:21,0:21:20.26:0,20,619	0/0:20,0:20:36.80:0,37,570	0/0:18,0:18:45.08:0,45,529	1/1:0,26:26:66.22:905,66,0	1/1:0,21:21:54.18:738,54,0	0/0:19,0:19:45.01:0,45,481	0/0:18,0:18:54.02:0,54,652	0/1:35,0:35:15.48:15,0,49	1/1:0,39:39:99:1430,105,0	1/1:0,22:22:60.20:828,60,0	0/0:21,0:21:2:0,2,45	0/1:23,1:24:21.21:37,0,21	0/1:38,0:38:7.34:7,0,69	1/1:0,23:23:54.13:704,54,0	1/1:0,20:20:48.16:653,48,0	1/1:0,22:22:57.19:789,57,0	0/0:29,1:30:50.01:0,50,926	0/0:20,0:20:48.48:0,48,571	1/1:29,0:29:1.86:27,2,0	0/0:4,0:4:12.01:0,12,144
chr10	54837482	.	TACACACACACACACAC	T	6589.83	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=5.964;DP=542;FS=5.472;HRun=0;HaplotypeScore=235.1325;InbreedingCoeff=0.7966;MQ=65.48;MQ0=6;MQRankSum=-5.458;QD=26.25;ReadPosRankSum=-3.779;VQSLOD=3.1164;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:24:28.32:0,28,541	1/1:5,0:6:6.49:152,6,0	0/0:27,0:22:3.01:0,3,56	0/0:24,0:17:3.01:0,3,56	1/1:13,8:22:9.03:394,9,0	1/1:9,4:15:12:374,12,0	1/1:13,8:22:9.03:333,9,0	0/0:12,0:11:0:0,0,0	1/1:9,6:16:8.99:263,9,0	1/1:15,13:29:31.63:1043,32,0	1/1:11,8:20:17.74:471,18,0	0/0:16,0:24:30.09:0,30,514	0/0:17,0:20:33.11:0,33,775	1/1:13,3:17:6.86:73,7,0	1/1:7,13:22:36.12:1533,36,0	1/1:17,0:26:18.95:672,19,0	0/0:12,0:16:8.99:0,9,94	0/0:9,0:8:10.59:0,11,304	0/0:12,0:12:6.02:0,6,109	0/0:18,0:21:27.09:0,27,993	0/0:24,0:24:39.13:0,39,1484	0/0:15,0:17:27.09:0,27,612	0/0:12,0:16:2.23:0,2,241	0/0:21,0:21:17.69:0,18,448	1/1:12,7:19:9.03:394,9,0	1/1:17,4:20:9.03:256,9,0	0/0:13,0:21:21.54:0,22,774	1/1:9,5:15:12.91:633,13,0
chr10	54841257	.	G	GT	2417.44	PASS	AC=12;AF=0.231;AN=52;BaseQRankSum=-3.158;DP=197;FS=23.352;HRun=0;HaplotypeScore=36.0055;InbreedingCoeff=0.6599;MQ=67.16;MQ0=8;MQRankSum=0.869;QD=29.48;ReadPosRankSum=6.372;VQSLOD=1.8388;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:6:10.62:0,11,54	1/1:0,5:5:14.97:170,15,0	0/0:15,0:6:17.92:0,18,208	0/0:14,0:7:15.17:0,15,188	0/0:3,0:3:2.97:0,3,20	0/0:6,0:6:5.45:0,5,39	0/0:10,0:10:5.92:0,6,39	./.	0/0:5,0:5:8.96:0,9,69	0/0:4,0:3:2.96:0,3,19	0/0:10,0:10:9.33:0,9,56	0/0:5,0:5:7.07:0,7,35	0/0:2,0:2:4.54:0,5,27	0/0:10,0:10:14.56:0,15,85	0/0:5,0:5:8.29:0,8,47	1/1:0,17:17:39.13:559,39,0	0/0:1,0:1:2.97:0,3,20	0/0:4,0:4:6.83:0,7,43	1/1:0,13:13:39.11:518,39,0	1/1:2,9:11:29.91:411,30,0	1/1:5,10:14:33.77:393,34,0	0/0:3,0:2:3.48:0,3,12	./.	0/0:1,0:1:1.25:0,1,3	0/0:4,0:4:10.74:0,11,57	0/0:1,0:1:2.97:0,3,20	1/1:0,21:21:38.99:535,39,0	0/0:3,0:3:5.91:0,6,37
chr10	54843475	.	C	CAAAAAA	9402.97	PASS	AC=52;AF=1.000;AN=52;DP=397;FS=0.000;HRun=13;HaplotypeScore=163.9515;InbreedingCoeff=-0.0227;MQ=35.15;MQ0=25;QD=24.05;VQSLOD=1.7614;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:17,1:18:30.05:612,30,0	1/1:1,0:1:3.01:66,3,0	./.	./.	1/1:22,0:21:38.12:649,38,0	1/1:12,0:10:16.78:184,17,0	1/1:14,0:9:12.04:285,12,0	1/1:30,0:23:28.59:353,29,0	1/1:8,0:5:3.01:80,3,0	1/1:16,0:15:24.03:370,24,0	1/1:9,0:8:15.01:187,15,0	1/1:11,1:13:21.03:435,21,0	1/1:10,1:11:9.46:111,9,0	1/1:7,0:6:12.24:106,12,0	1/1:13,0:11:18.03:357,18,0	1/1:18,2:17:27.43:468,27,0	1/1:17,3:18:26.77:535,27,0	1/1:10,1:13:16.87:375,17,0	1/1:25,1:23:35.95:676,36,0	1/1:13,0:11:27.09:643,27,0	1/1:8,0:7:15.05:338,15,0	1/1:13,0:14:15.05:239,15,0	1/1:15,0:14:15.05:305,15,0	1/1:9,1:11:15.05:337,15,0	1/1:14,0:14:17.58:253,18,0	1/1:16,0:15:31.59:472,32,0	1/1:21,2:22:35.98:863,36,0	1/1:11,0:7:15.69:102,16,0
chr10	54844227	.	CTTCTTCTTCTTCTTCTTCTTCTTCT	C	1898.60	PASS	AB=0.985;AC=21;AF=0.525;AN=40;BaseQRankSum=4.635;DP=192;FS=1.492;HRun=0;HaplotypeScore=103.9211;InbreedingCoeff=-0.2143;MQ=21.20;MQ0=70;MQRankSum=-0.705;QD=14.38;ReadPosRankSum=-2.368;VQSLOD=0.9804;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:6,0:3:1.56:2,0,42	./.	./.	./.	1/1:11,0:6:2.56:163,3,0	0/1:7,0:6:53.76:76,0,54	0/0:13,0:7:14.63:0,15,98	0/0:15,0:8:18.94:0,19,238	0/1:5,0:3:41.45:41,0,66	0/1:19,0:7:99:264,0,155	0/0:9,0:2:1.55:0,2,5	0/1:8,2:6:62.77:277,0,63	1/1:3,1:3:6.02:263,6,0	1/1:8,0:5:15.05:459,15,0	0/1:6,0:3:18.35:62,0,18	0/1:11,0:11:85.11:85,0,251	0/1:6,0:2:5.65:6,0,28	0/1:5,0:4:11.95:12,0,40	0/0:6,0:2:3:0,3,25	./.	1/1:4,0:2:3:27,3,0	./.	./.	1/1:3,1:2:6:161,6,0	0/1:15,0:12:57.89:58,0,124	0/1:11,0:6:73.06:73,0,106	./.	./.
chr10	54844739	.	C	CA	4366.55	PASS	AC=30;AF=0.556;AN=54;BaseQRankSum=-2.698;DP=461;FS=22.077;HRun=8;HaplotypeScore=47.4499;InbreedingCoeff=0.9514;MQ=46.38;MQ0=33;MQRankSum=2.871;QD=20.12;ReadPosRankSum=1.429;VQSLOD=3.2821;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,21:19:45.13:519,45,0	1/1:1,13:14:30.09:346,30,0	1/1:5,0:1:2.84:14,3,0	./.	0/0:26,0:27:51:0,51,462	0/0:26,0:25:54.02:0,54,493	0/0:13,0:13:26.05:0,26,225	0/0:27,2:19:16.40:0,16,404	0/0:9,0:9:12.01:0,12,110	0/0:17,0:16:39:0,39,351	0/0:24,0:24:42.01:0,42,384	1/1:2,7:8:12.04:139,12,0	1/1:1,15:16:27.08:311,27,0	0/0:19,0:19:32.83:0,33,292	0/0:14,0:14:27.01:0,27,247	1/1:2,14:16:32.69:380,33,0	1/1:1,10:9:21.06:242,21,0	1/1:1,11:9:21.06:242,21,0	1/1:4,9:9:18.05:208,18,0	1/1:1,19:20:54.06:582,54,0	1/1:0,8:8:18.05:208,18,0	1/1:4,11:14:20.81:242,21,0	1/1:7,22:28:45.13:519,45,0	1/1:1,7:5:9.03:104,9,0	0/0:24,0:24:57:0,57,515	0/0:22,0:20:57.03:0,57,521	1/1:3,17:15:27.08:311,27,0	0/0:15,0:12:30.02:0,30,275
chr10	54846465	.	C	CT	11661.94	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-11.339;DP=753;FS=0.281;HRun=7;HaplotypeScore=85.0191;InbreedingCoeff=0.9975;MQ=72.28;MQ0=0;MQRankSum=-2.070;QD=30.13;ReadPosRankSum=2.835;VQSLOD=5.0356;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,32:34:90.28:1085,90,0	1/1:0,11:11:30.09:362,30,0	0/0:22,0:21:42.28:0,42,372	0/0:19,0:19:47.30:0,47,452	0/0:37,0:37:99:0,105,1014	0/0:26,0:26:75.12:0,75,724	0/0:21,0:21:48.07:0,48,463	0/0:27,0:27:68.47:0,68,660	0/0:36,0:36:99:0,105,1014	0/0:29,0:29:72.11:0,72,692	0/0:18,0:18:54.09:0,54,520	1/1:4,29:33:69.21:833,69,0	1/1:2,28:30:87.26:1037,87,0	0/0:26,0:26:69:0,69,653	0/0:27,0:27:81.13:0,81,782	1/1:4,19:23:25.22:587,25,0	1/1:2,38:41:99:1301,108,0	1/1:1,25:26:78.22:930,78,0	1/1:2,30:31:87.26:1038,87,0	1/1:2,20:22:60.10:684,60,0	1/1:2,23:25:57.17:688,57,0	1/1:4,22:26:63.19:759,63,0	1/1:5,23:28:57.17:689,57,0	1/1:3,25:28:69.21:834,69,0	0/0:28,0:28:78.12:0,78,753	0/0:42,0:42:99:0,114,1092	1/1:2,26:28:69.68:835,70,0	0/0:8,0:8:15.02:0,15,145
chr10	54846927	.	AT	A	2730.88	PASS	AB=0.867;AC=21;AF=0.375;AN=56;BaseQRankSum=-8.902;DP=626;FS=6.477;HRun=12;HaplotypeScore=90.6129;InbreedingCoeff=0.9120;MQ=70.17;MQ0=0;MQRankSum=-0.900;QD=14.00;ReadPosRankSum=3.751;VQSLOD=4.0438;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,21:26:47.78:371,48,0	1/1:4,7:11:14.93:116,15,0	0/0:26,0:20:32.84:0,33,284	0/0:17,0:15:9.26:0,9,74	0/0:28,0:28:75.63:0,76,430	0/0:28,0:27:75.45:0,75,423	0/0:14,0:14:31.93:0,32,175	0/0:36,0:36:71:0,71,358	0/0:24,0:24:52.34:0,52,315	0/0:33,0:33:87.86:0,88,451	0/0:36,0:36:78.72:0,79,469	1/1:2,13:15:32.85:255,33,0	1/1:4,15:19:46.85:354,47,0	0/0:15,0:15:37.73:0,38,206	0/0:23,0:23:58.04:0,58,319	1/1:1,14:15:35.86:279,36,0	1/1:4,15:19:28.55:289,29,0	1/1:2,12:14:32.87:255,33,0	0/0:21,1:22:18.85:0,19,372	0/0:30,1:32:54.73:0,55,710	0/1:11,2:13:13.42:13,0,234	1/1:3,22:26:39.25:444,39,0	1/1:6,16:23:19.34:318,19,0	1/1:0,14:14:32.87:255,33,0	0/0:30,0:30:83.82:0,84,448	0/0:28,0:28:71.59:0,72,379	0/0:29,1:32:47.58:0,48,610	0/0:6,0:6:14.58:0,15,82
chr10	54848482	.	A	AC	10390.61	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-13.134;DP=619;FS=3.116;HRun=2;HaplotypeScore=65.8665;InbreedingCoeff=0.9966;MQ=74.20;MQ0=1;MQRankSum=-0.590;QD=33.52;ReadPosRankSum=4.359;VQSLOD=4.9453;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:1,22:23:51.17:702,51,0	1/1:0,10:10:21.07:290,21,0	0/0:14,0:13:27.39:0,27,236	0/0:12,0:10:14.60:0,15,169	0/0:30,0:30:84.21:0,84,978	0/0:32,0:32:90.20:0,90,1067	0/0:13,0:13:39.08:0,39,444	0/0:32,3:35:55.62:0,56,1049	0/0:12,0:12:36.09:0,36,419	0/0:29,0:29:81.21:0,81,960	0/0:12,0:12:36.11:0,36,444	1/1:1,22:23:42.14:580,42,0	1/1:0,21:21:54.18:745,54,0	0/0:17,0:17:51.16:0,51,629	0/0:38,0:38:90.46:0,90,1303	1/1:0,19:19:45.15:622,45,0	1/1:0,34:34:86.88:1170,87,0	1/1:1,12:13:27.09:369,27,0	1/1:3,19:22:57.16:753,57,0	1/1:0,28:28:78.26:1073,78,0	1/1:1,15:16:36.12:495,36,0	1/1:0,19:19:57.04:739,57,0	1/1:3,27:30:78.15:1073,78,0	1/1:0,15:15:42.14:580,42,0	0/0:25,0:25:75.20:0,75,886	0/0:22,1:23:27.68:0,28,743	1/1:0,37:37:87.18:1199,87,0	0/0:17,0:17:45.11:0,45,522
chr10	54850129	.	AGTGT	A	4284.24	PASS	AB=0.691;AC=22;AF=0.393;AN=56;BaseQRankSum=-4.704;DP=805;FS=2.723;HRun=0;HaplotypeScore=197.3814;InbreedingCoeff=0.8117;MQ=59.18;MQ0=8;MQRankSum=-3.568;QD=13.73;ReadPosRankSum=1.128;VQSLOD=4.5733;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:52:59.18:0,59,982	0/0:7,0:7:5.68:0,6,91	0/0:32,0:18:6.02:0,6,84	0/0:30,0:21:9.01:0,9,136	0/1:15,15:30:3.49:81,0,3	1/1:13,8:23:15:192,15,0	1/1:14,14:30:17.67:379,18,0	1/1:20,6:25:18.93:266,19,0	1/1:9,18:30:51.15:750,51,0	1/1:15,18:34:17.36:726,17,0	1/1:10,4:16:2.96:48,3,0	0/0:9,0:23:36.12:0,36,630	0/0:15,0:39:54.65:0,55,887	1/1:10,11:23:24.04:338,24,0	0/1:16,8:25:4.02:220,0,4	0/0:32,0:32:35.74:0,36,454	0/0:9,1:40:21.10:0,21,1078	0/0:11,0:30:50.17:0,50,784	0/0:18,0:18:18.05:0,18,312	0/0:19,0:30:20.15:0,20,200	0/0:31,0:30:17.94:0,18,189	0/0:12,0:32:35.54:0,36,461	0/0:12,0:19:17.99:0,18,177	0/0:17,0:53:72.24:0,72,1255	1/1:7,13:21:18.06:289,18,0	1/1:20,12:33:44.30:647,44,0	0/0:10,0:25:8.99:0,9,117	1/1:7,11:18:23.56:346,24,0
chr10	54850131	.	T	TGA	564.79	PASS	AB=0.977;AC=9;AF=0.161;AN=56;BaseQRankSum=7.046;DP=804;FS=11.732;HRun=0;HaplotypeScore=189.7156;InbreedingCoeff=0.0158;MQ=58.40;MQ0=8;MQRankSum=2.592;QD=2.03;ReadPosRankSum=7.854;VQSLOD=0.7442;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:52,0:52:32.73:33,0,336	1/1:6,1:7:6.95:58,7,0	0/0:33,0:18:44.09:0,44,421	0/0:31,0:22:47.98:0,48,489	0/0:30,0:29:41.78:0,42,329	0/0:23,0:23:50.84:0,51,406	0/0:30,0:29:53.57:0,54,414	0/0:23,0:22:51.27:0,51,419	0/0:29,0:29:71.52:0,72,536	0/0:35,0:35:53.83:0,54,684	0/0:16,0:16:29.74:0,30,241	0/1:23,0:23:27.07:27,0,156	0/1:39,0:39:14.83:15,0,229	0/0:23,0:23:50.75:0,51,394	0/0:25,0:24:59.80:0,60,473	0/1:26,6:32:19.96:369,0,20	0/1:40,0:40:99:121,0,162	0/0:32,0:32:12.35:0,12,232	0/0:19,0:19:47.75:0,48,347	0/0:29,0:29:24.20:0,24,291	0/0:30,0:29:22.33:0,22,291	0/1:33,0:33:21.52:22,0,196	0/0:20,0:20:1.23:0,1,147	0/1:52,0:52:60.55:61,0,232	0/0:22,0:21:13.24:0,13,233	0/0:33,0:33:80.51:0,81,669	0/0:25,0:25:21.04:0,21,192	0/0:18,0:18:41.84:0,42,322
chr10	54850161	.	T	TGTGTGTGC	2020.55	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=4.032;DP=739;FS=5.901;HRun=0;HaplotypeScore=262.8874;InbreedingCoeff=-0.0159;MQ=58.56;MQ0=12;MQRankSum=-0.149;QD=5.29;ReadPosRankSum=4.836;VQSLOD=1.5749;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:45,0:45:74.01:74,0,283	1/1:8,0:10:17.03:222,17,0	0/0:20,0:8:17.25:0,17,175	0/1:25,0:16:9.90:10,0,303	0/0:31,0:30:48.34:0,48,457	0/0:19,0:19:43.52:0,44,442	0/0:32,0:31:53.03:0,53,737	0/0:22,0:21:59.24:0,59,502	0/0:33,0:33:82.94:0,83,1276	0/0:35,0:35:96.99:0,97,1154	0/0:10,0:10:11.51:0,12,142	0/1:22,0:22:58.42:58,0,216	0/1:31,0:31:99:119,0,112	0/0:22,0:22:44.86:0,45,547	0/0:21,0:20:49.54:0,50,634	1/1:22,5:28:41.99:698,42,0	0/1:42,0:42:78.66:79,0,439	0/1:32,0:32:80.47:80,0,170	0/1:18,0:16:99:267,0,200	0/0:22,0:22:4.91:0,5,174	0/1:29,0:29:66.58:67,0,141	0/1:30,0:30:20.17:20,0,175	0/0:26,0:26:19.29:0,19,278	0/1:48,0:48:99:133,0,371	0/0:23,0:22:37.52:0,38,474	0/0:28,0:28:71.19:0,71,963	0/1:22,0:22:68.81:362,0,69	0/0:13,0:13:25.31:0,25,496
chr10	54851136	.	TCA	T	1366.29	PASS	AB=0.987;AC=32;AF=0.696;AN=46;BaseQRankSum=5.677;DP=525;FS=13.190;HRun=0;HaplotypeScore=85.2637;InbreedingCoeff=0.3474;MQ=66.64;MQ0=9;MQRankSum=1.044;QD=4.47;ReadPosRankSum=1.568;VQSLOD=1.4343;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:24:9.01:0,9,95	0/1:7,0:7:15.44:15,0,35	./.	./.	1/1:21,1:25:9.02:96,9,0	1/1:21,2:24:29.66:256,30,0	1/1:13,5:17:9.02:96,9,0	./.	1/1:14,2:17:20.78:181,21,0	1/1:16,5:20:2.97:24,3,0	1/1:12,1:14:6.89:61,7,0	1/1:13,1:14:6.01:63,6,0	0/0:8,0:8:8.93:0,9,68	1/1:8,1:9:6.01:64,6,0	1/1:24,9:34:23.89:234,24,0	0/0:7,0:15:5.97:0,6,46	0/1:17,0:17:31.98:32,0,117	0/1:26,0:25:19.32:19,0,298	1/1:13,0:14:4.66:19,5,0	./.	./.	0/0:15,0:15:9.01:0,9,111	0/1:12,0:12:9.86:10,0,115	0/0:26,0:25:4.10:0,4,254	1/1:9,7:16:9.02:96,9,0	1/1:20,2:22:18.04:189,18,0	1/1:8,0:12:4.40:18,4,0	1/1:1,1:3:5.85:46,6,0
chr10	54851732	.	C	CT	8142.65	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-17.442;DP=611;FS=2.447;HRun=8;HaplotypeScore=96.7680;InbreedingCoeff=0.9838;MQ=72.29;MQ0=2;MQRankSum=-0.812;QD=27.23;ReadPosRankSum=0.842;VQSLOD=4.9421;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,37:38:99:1212,105,0	1/1:4,11:15:24.07:277,24,0	0/0:32,0:15:28.97:0,29,270	0/0:31,0:18:24.29:0,24,188	0/0:33,0:33:54.76:0,55,184	0/0:18,0:18:30.89:0,31,88	0/0:8,0:8:10.90:0,11,31	0/0:27,0:27:41.35:0,41,149	0/0:16,0:16:18.17:0,18,52	0/0:27,0:27:40.63:0,41,133	0/0:23,0:23:32.69:0,33,92	1/1:1,16:17:39.12:450,39,0	1/1:2,17:19:42.12:485,42,0	0/0:11,0:11:12.63:0,13,36	0/0:14,0:14:14.52:0,15,41	1/1:4,17:21:36.11:415,36,0	1/1:5,28:33:78.23:900,78,0	1/1:5,27:32:80.83:910,81,0	1/1:2,19:21:57.17:655,57,0	1/1:3,20:23:61.73:695,62,0	1/1:2,11:13:24.07:277,24,0	1/1:2,14:16:14.65:420,15,0	1/1:3,10:13:30.09:345,30,0	1/1:2,11:13:35.14:387,35,0	0/0:22,0:22:33.26:0,33,98	0/0:31,0:31:50.11:0,50,151	1/1:0,25:25:63.16:714,63,0	0/0:19,0:19:30.89:0,31,88
chr10	54851740	.	TC	T	7830.28	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-13.342;DP=605;FS=5.564;HRun=2;HaplotypeScore=95.3136;InbreedingCoeff=0.9978;MQ=67.24;MQ0=4;MQRankSum=-1.708;QD=32.36;ReadPosRankSum=0.963;VQSLOD=4.5560;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,104,776	0/0:10,0:10:23.86:0,24,178	0/0:40,0:16:33.64:0,34,421	0/0:32,1:16:23.03:0,23,271	1/1:1,30:31:90.16:1104,90,0	1/1:0,18:18:51.17:658,51,0	1/1:0,9:9:21.06:259,21,0	1/1:3,27:29:68.04:844,68,0	1/1:0,13:13:30.10:387,30,0	1/1:1,21:22:63.18:787,63,0	1/1:1,23:24:68.97:793,69,0	0/0:19,0:19:47.75:0,48,360	0/0:16,0:16:41.76:0,42,311	1/1:0,11:11:22.31:274,22,0	1/1:0,10:10:24.08:310,24,0	0/0:17,0:17:38.79:0,39,292	0/0:34,0:34:95.51:0,96,719	0/0:29,1:30:48.15:0,48,567	0/0:21,0:21:61.53:0,62,438	0/0:24,0:24:71.50:0,72,547	0/0:12,0:12:26.86:0,27,203	0/0:18,0:18:50.70:0,51,398	0/0:13,0:13:38.81:0,39,296	0/0:14,0:14:41.78:0,42,328	1/1:1,24:26:49.71:671,50,0	1/1:0,29:29:87.25:1087,87,0	0/0:26,0:26:65.62:0,66,488	1/1:0,19:19:51.17:658,51,0
chr10	54852216	.	T	TA	9854.03	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-7.214;DP=577;FS=2.240;HRun=2;HaplotypeScore=94.7939;InbreedingCoeff=0.9986;MQ=84.93;MQ0=0;MQRankSum=0.679;QD=41.23;ReadPosRankSum=-0.155;VQSLOD=4.4877;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,99,1283	0/0:7,0:7:18.06:0,18,232	0/0:12,0:12:30.08:0,30,367	0/0:23,0:23:60.12:0,60,734	1/1:0,30:30:87.29:1276,87,0	1/1:1,18:18:48.16:719,48,0	1/1:1,27:28:63.21:944,63,0	1/1:2,28:29:81.84:1227,82,0	1/1:1,16:17:48.16:719,48,0	1/1:1,11:12:30.10:448,30,0	1/1:2,9:11:30.10:439,30,0	0/0:24,0:24:66.21:0,66,857	0/0:25,0:25:75.23:0,75,959	1/1:0,14:14:42.14:629,42,0	1/1:0,23:23:66.22:988,66,0	0/0:28,0:28:84.27:0,84,1091	0/0:20,0:20:60.18:0,60,763	0/0:19,0:19:57.19:0,57,739	0/0:16,0:16:39.11:0,39,492	0/0:16,0:16:42.14:0,42,545	0/0:32,0:32:96.31:0,96,1246	0/0:14,0:14:42.14:0,42,545	0/0:12,0:12:36.12:0,36,467	0/0:30,0:30:87.28:0,87,1128	1/1:0,17:17:51.17:764,51,0	1/1:1,22:23:69.23:1027,69,0	0/0:25,0:25:75.23:0,75,958	1/1:0,15:15:45.15:674,45,0
chr10	54853410	.	AG	A	7906.31	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=13.711;DP=702;FS=1.418;HRun=5;HaplotypeScore=70.5493;InbreedingCoeff=0.9985;MQ=66.58;MQ0=2;MQRankSum=0.517;QD=30.29;ReadPosRankSum=2.024;VQSLOD=5.6003;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:93.29:0,93,1254	0/0:12,0:12:33.11:0,33,451	0/0:38,0:29:62.86:0,63,784	0/0:27,0:26:59.39:0,59,733	1/1:0,12:12:33.06:361,33,0	1/1:2,8:10:23.95:272,24,0	1/1:1,17:18:51.15:579,51,0	1/1:2,21:23:60.14:660,60,0	1/1:4,26:30:72.20:809,72,0	1/1:2,31:33:90.24:1012,90,0	1/1:3,20:22:63.14:697,63,0	0/0:29,0:29:84.24:0,84,1105	0/0:35,0:35:96.28:0,96,1278	1/1:5,21:26:69.16:767,69,0	1/1:0,26:26:72.21:817,72,0	0/0:26,1:27:47.24:0,47,1033	0/0:32,0:32:90.23:0,90,1163	0/0:39,0:39:99:0,100,1335	0/0:14,0:13:36.09:0,36,472	0/0:20,0:20:57.18:0,57,763	0/0:29,0:29:81.26:0,81,1093	0/0:28,0:28:81.26:0,81,1091	0/0:16,0:16:43.37:0,43,587	0/0:30,0:30:87.27:0,87,1173	1/1:0,19:19:57.16:646,57,0	1/1:4,31:35:96.27:1083,96,0	0/0:32,0:32:90.29:0,90,1215	1/1:0,6:6:18.05:204,18,0
chr10	54853415	.	GT	G	1634.66	PASS	AB=0.964;AC=21;AF=0.375;AN=56;BaseQRankSum=18.932;DP=687;FS=3.196;HRun=3;HaplotypeScore=88.0544;InbreedingCoeff=0.7932;MQ=62.94;MQ0=2;MQRankSum=0.475;QD=6.22;ReadPosRankSum=3.282;VQSLOD=0.9194;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,102,1369	0/0:11,0:11:33.11:0,33,472	0/0:34,0:26:67.64:0,68,829	0/0:22,0:21:56.95:0,57,729	0/1:14,0:14:7.56:52,0,8	0/1:13,1:14:62.45:62,0,68	1/1:18,0:18:17.03:112,17,0	0/1:23,1:24:6.51:140,0,7	1/1:27,1:28:59.73:258,60,0	1/1:32,0:32:20.56:158,21,0	1/1:21,2:22:47.55:224,48,0	0/0:29,0:29:81.25:0,81,1114	0/0:32,0:32:93.30:0,93,1310	1/1:21,3:24:53.96:248,54,0	1/1:27,0:27:32.23:173,32,0	0/0:27,0:27:70.82:0,71,1097	0/0:32,0:32:90.24:0,90,1211	0/0:35,0:35:79.32:0,79,1329	0/0:13,0:12:33.10:0,33,448	0/0:19,0:19:54.18:0,54,766	0/0:28,0:28:81.25:0,81,1133	0/0:30,0:30:87.25:0,87,1186	0/0:17,0:17:45.14:0,45,619	0/0:30,0:30:87.28:0,87,1224	1/1:19,0:19:40.62:127,41,0	1/1:33,1:34:44.59:235,45,0	0/0:30,0:30:87.29:0,87,1243	1/1:6,0:6:15.13:59,15,0
chr10	54855240	.	T	TGGGAAAAGTTTGAATGGAAGTAAA	47844.28	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-2.192;DP=683;FS=9.809;HRun=0;HaplotypeScore=394.9102;InbreedingCoeff=1.0000;MQ=85.27;MQ0=0;MQRankSum=-18.791;QD=200.19;ReadPosRankSum=2.875;VQSLOD=4.0255;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:23,6:33:69.10:5837,69,0	0/0:15,0:15:39.12:0,39,1914	0/0:29,0:29:69.23:0,69,2621	0/0:23,0:23:55.67:0,56,2136	0/0:25,0:25:75.24:0,75,4331	0/0:23,0:23:66.21:0,66,3843	0/0:30,0:30:81.25:0,81,4422	0/0:17,0:17:48.15:0,48,1982	0/0:29,0:29:78.27:0,78,4127	0/0:24,0:24:72.25:0,72,4032	0/0:15,0:15:42.14:0,42,2141	1/1:27,10:41:99:9513,102,0	1/1:22,5:29:78.27:6777,78,0	0/0:27,0:27:51.28:0,51,4106	0/0:23,0:23:63.22:0,63,3791	0/0:21,0:21:63.22:0,63,3504	1/1:23,4:35:66.23:5740,66,0	1/1:18,3:23:54.19:5101,54,0	0/0:20,0:20:54.19:0,54,2412	0/0:15,0:15:45.15:0,45,2490	0/0:20,0:20:57.20:0,57,2955	1/1:23,6:32:84.29:7400,84,0	1/1:15,4:20:51.18:4400,51,0	1/1:16,1:26:39.13:3076,39,0	0/0:18,0:18:45.15:0,45,2380	0/0:37,0:37:96.32:0,96,5627	0/0:14,0:14:42.14:0,42,2455	0/0:19,0:19:57.03:0,57,3313
chr10	54857829	.	CT	C	456.76	PASS	AB=0.910;AC=11;AF=0.196;AN=56;BaseQRankSum=8.152;DP=607;FS=0.459;HRun=10;HaplotypeScore=109.9511;InbreedingCoeff=0.3839;MQ=72.54;MQ0=0;MQRankSum=-1.103;QD=2.63;ReadPosRankSum=0.425;VQSLOD=-0.0413;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,2:33:32.07:0,32,748	0/0:10,0:10:27.05:0,27,283	0/1:23,1:18:34.11:34,0,171	0/0:12,0:10:2.14:0,2,73	0/1:18,3:21:14.56:15,0,411	0/0:20,2:22:28.06:0,28,513	0/0:13,1:14:12.89:0,13,353	0/0:25,2:27:20.49:0,20,527	0/1:19,3:22:12.19:12,0,522	0/0:28,1:29:55.06:0,55,782	0/0:20,0:21:45.09:0,45,468	0/0:17,0:17:38.62:0,39,422	0/0:13,0:13:30.04:0,30,308	0/0:26,0:26:57.10:0,57,594	0/0:22,1:23:34.10:0,34,595	0/0:19,1:20:25.07:0,25,490	0/0:42,1:43:85.15:0,85,1110	0/1:8,2:10:28.04:28,0,173	1/1:10,0:10:4.20:70,4,0	1/1:32,0:32:33.05:212,33,0	1/1:32,0:32:36.09:236,36,0	0/0:14,2:16:16.07:0,16,398	0/0:18,0:18:51.05:0,51,518	0/0:31,2:33:58.16:0,58,853	0/0:14,0:14:21.40:0,21,327	0/0:25,1:26:45.98:0,46,650	0/1:23,0:23:5.29:5,0,15	0/0:16,0:16:44.99:0,45,430
chr10	54857838	.	T	TC	988.54	PASS	AB=0.784;AC=6;AF=0.107;AN=56;BaseQRankSum=5.553;DP=633;FS=2.791;HRun=0;HaplotypeScore=110.5526;InbreedingCoeff=0.2684;MQ=75.33;MQ0=0;MQRankSum=0.482;QD=8.60;ReadPosRankSum=2.413;VQSLOD=3.8169;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,102,1223	0/0:10,0:10:27.09:0,27,364	0/0:27,0:21:54.84:0,55,457	0/1:14,0:12:11.46:11,0,141	0/0:19,0:19:52.14:0,52,606	0/0:28,0:28:78.05:0,78,901	0/0:15,0:15:45.01:0,45,553	0/0:30,0:30:80.20:0,80,940	0/0:22,0:22:65.89:0,66,811	0/0:28,0:28:84.16:0,84,1112	0/0:20,0:20:54.12:0,54,654	0/0:21,0:21:52.97:0,53,653	0/0:13,0:13:36.04:0,36,433	0/0:23,0:23:65.67:0,66,781	0/0:22,0:22:66.09:0,66,842	0/0:20,0:20:60.06:0,60,758	0/0:41,0:41:99:0,123,1570	0/0:9,0:9:26.86:0,27,305	1/1:4,6:10:2.86:166,3,0	0/1:10,23:33:5.91:404,0,6	0/1:9,23:32:55.69:489,0,56	0/0:19,0:19:56.99:0,57,664	0/0:21,0:21:61.33:0,61,719	0/0:33,0:33:90.13:0,90,1163	0/0:17,0:17:44.70:0,45,521	0/0:29,0:29:87.12:0,87,1071	0/1:25,1:26:6.84:36,0,7	0/0:16,0:16:48.12:0,48,598
chr10	54857839	.	T	TC	1253.66	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=6.369;DP=629;FS=0.568;HRun=7;HaplotypeScore=108.8326;InbreedingCoeff=0.8461;MQ=77.29;MQ0=0;MQRankSum=0.665;QD=11.00;ReadPosRankSum=-0.929;VQSLOD=2.1026;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:77.73:0,78,681	0/0:9,0:9:18.02:0,18,173	0/0:28,0:23:39.64:0,40,294	0/1:15,0:13:20.94:21,0,36	0/0:19,0:19:38.84:0,39,345	0/0:29,0:29:71.90:0,72,641	0/0:15,0:15:38.92:0,39,351	0/0:30,0:30:47.92:0,48,421	0/0:22,0:22:53.79:0,54,482	0/0:28,0:28:62.98:0,63,590	0/0:19,0:19:33:0,33,303	0/0:20,0:21:47.03:0,47,415	0/0:14,0:14:35.96:0,36,319	0/0:22,0:22:45.58:0,46,406	0/0:22,0:22:59.97:0,60,553	0/0:20,0:20:50.91:0,51,459	0/0:40,0:40:99:0,105,968	0/0:9,0:9:26.84:0,27,228	1/1:11,0:11:21.88:211,22,0	1/1:30,0:30:51.48:517,51,0	1/1:31,0:31:52.35:576,52,0	0/0:19,0:19:48.44:0,48,412	0/0:21,0:21:40.22:0,40,357	0/0:33,0:33:83.93:0,84,768	0/0:16,0:16:32.97:0,33,300	0/0:28,0:28:59.91:0,60,538	1/1:2,25:27:8.25:89,8,0	0/0:16,0:16:26.97:0,27,244
chr10	54858268	.	GC	G	5811.70	PASS	AB=0.919;AC=28;AF=0.500;AN=56;BaseQRankSum=4.696;DP=653;FS=7.723;HRun=10;HaplotypeScore=76.8550;InbreedingCoeff=0.6533;MQ=77.40;MQ0=0;MQRankSum=-1.196;QD=15.21;ReadPosRankSum=1.516;VQSLOD=4.9162;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:93.07:0,93,966	0/0:4,0:4:0:0,0,0	0/1:17,2:17:63.35:63,0,93	0/1:20,1:21:99:100,0,164	1/1:4,14:18:26.98:234,27,0	1/1:3,17:20:50.98:443,51,0	1/1:10,24:37:66.08:539,66,0	1/1:6,17:23:47.97:416,48,0	1/1:5,29:34:77.98:677,78,0	1/1:5,17:23:49.99:422,50,0	1/1:3,12:15:23.98:208,24,0	0/1:24,3:27:5.99:6,0,602	0/0:30,1:31:46.18:0,46,729	1/1:2,37:39:73.55:854,74,0	1/1:4,36:40:99:865,101,0	0/0:6,0:16:1.02:0,1,100	0/0:19,2:21:31.09:0,31,563	0/0:21,0:21:57.11:0,57,608	0/0:6,0:17:31.98:0,32,223	0/1:6,1:11:14.37:14,0,41	0/0:13,0:32:49.24:0,49,320	0/0:14,0:14:9.53:0,10,271	0/0:16,0:16:10.32:0,10,339	0/0:38,0:37:99:0,105,1133	1/1:7,21:28:53.98:468,54,0	1/1:6,16:23:50.01:422,50,0	0/0:7,0:24:43.11:0,43,270	1/1:0,3:3:9:78,9,0
chr10	54860412	.	G	GGA	2109.54	PASS	AB=0.843;AC=45;AF=0.833;AN=54;BaseQRankSum=0.663;DP=675;FS=10.468;HRun=0;HaplotypeScore=117.3270;InbreedingCoeff=0.0246;MQ=71.09;MQ0=12;MQRankSum=0.153;QD=3.51;ReadPosRankSum=0.321;VQSLOD=2.0442;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:29:27.13:227,27,0	1/1:3,4:8:5.72:71,6,0	0/1:41,0:20:0:0,0,0	./.	1/1:21,0:21:9.02:111,9,0	1/1:24,0:27:7.56:58,8,0	0/1:16,0:23:13.66:20,0,14	0/1:27,0:27:5.33:11,0,5	1/1:27,0:27:16.55:180,17,0	1/1:21,0:21:4.23:43,4,0	1/1:12,0:12:2.48:25,2,0	1/1:12,12:23:2.53:44,3,0	1/1:12,0:18:5.76:68,6,0	1/1:17,0:17:3:25,3,0	1/1:25,0:24:2.89:22,3,0	0/0:25,0:26:32.87:0,33,332	1/1:18,0:29:8.99:75,9,0	1/1:11,0:23:4.25:29,4,0	1/1:11,5:15:11.93:147,12,0	1/1:18,0:18:8.39:114,8,0	1/1:21,0:22:18.06:259,18,0	0/1:15,14:31:19.25:78,0,19	0/1:21,3:25:19.22:245,0,19	0/1:19,14:33:69.57:112,0,70	1/1:16,0:16:5.99:49,6,0	1/1:29,0:29:8.98:46,9,0	0/1:28,0:31:35.06:183,0,35	1/1:7,0:7:0.89:2,1,0
chr10	54863285	.	GA	G	11052.28	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=0.580;DP=554;FS=7.792;HRun=10;HaplotypeScore=161.3889;InbreedingCoeff=0.9026;MQ=67.52;MQ0=0;MQRankSum=-6.336;QD=21.01;ReadPosRankSum=3.652;VQSLOD=3.7067;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,26:27:38.80:566,39,0	1/1:1,2:3:6:52,6,0	0/0:16,0:16:21.05:0,21,228	0/0:12,0:12:26.64:0,27,277	1/1:3,20:23:44.95:390,45,0	1/1:3,14:17:41.97:365,42,0	1/1:0,18:17:44.99:391,45,0	1/1:2,30:31:77.93:671,78,0	1/1:4,16:18:38.98:338,39,0	1/1:2,13:15:38.98:339,39,0	1/1:4,14:17:8.80:305,9,0	1/1:2,23:25:65.97:573,66,0	1/1:8,18:27:55.98:475,56,0	1/1:0,14:14:35.99:312,36,0	1/1:4,23:27:65.98:573,66,0	1/1:2,16:18:41.99:365,42,0	1/1:1,15:16:41.99:365,42,0	1/1:1,15:16:44.98:391,45,0	1/1:4,15:19:11.81:331,12,0	1/1:0,12:12:35.99:312,36,0	1/1:1,14:15:38.99:339,39,0	1/1:1,17:18:47.02:396,47,0	1/1:1,15:16:47.99:416,48,0	1/1:0,33:33:89.98:781,90,0	1/1:4,11:15:26.97:234,27,0	1/1:2,24:27:71.01:601,71,0	1/1:4,33:37:89.94:781,90,0	1/1:1,16:17:44.98:391,45,0
chr10	54863646	.	A	AG	382.67	PASS	AB=0.965;AC=6;AF=0.107;AN=56;BaseQRankSum=6.167;DP=500;FS=11.063;HRun=0;HaplotypeScore=85.4143;InbreedingCoeff=0.4032;MQ=41.20;MQ0=30;MQRankSum=-0.220;QD=4.72;ReadPosRankSum=0.200;VQSLOD=2.5955;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:33:82.96:0,83,527	0/0:6,0:4:4.54:0,5,27	0/0:12,0:3:4.81:0,5,28	0/0:14,0:1:3.01:0,3,37	0/0:24,0:23:67.18:0,67,448	0/0:25,0:23:65.20:0,65,462	0/0:21,0:20:56:0,56,386	0/0:28,0:27:57.58:0,58,402	0/0:12,0:11:29.20:0,29,147	0/0:26,0:25:58.62:0,59,434	0/0:19,0:17:37.54:0,38,278	0/0:11,0:11:28.11:0,28,184	0/0:16,0:15:26.36:0,26,186	0/0:19,0:16:24.49:0,24,162	0/0:9,0:9:26.27:0,26,167	0/0:9,0:8:19.13:0,19,140	0/0:22,0:15:32.40:0,32,202	0/0:25,0:21:54.12:0,54,347	0/1:23,1:22:12.35:195,0,12	1/1:15,3:14:19.59:137,20,0	1/1:7,0:6:2.09:6,2,0	0/0:12,0:11:31.46:0,31,191	0/0:20,0:19:48.80:0,49,296	0/0:7,0:6:3:0,3,29	0/0:15,0:14:40.85:0,41,283	0/0:22,0:22:59.29:0,59,407	0/1:31,1:32:99:163,0,103	0/0:11,0:7:17.75:0,18,116
chr10	54863654	.	G	GA	2033.80	PASS	AB=1.000;AC=12;AF=0.214;AN=56;BaseQRankSum=3.922;DP=502;FS=31.799;HRun=24;HaplotypeScore=82.6985;InbreedingCoeff=0.5111;MQ=48.95;MQ0=19;MQRankSum=-4.372;QD=14.32;ReadPosRankSum=0.903;VQSLOD=1.7111;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:33:57.63:0,58,636	0/1:7,0:5:11.80:12,0,28	0/1:16,0:6:15.75:16,0,53	0/0:18,0:5:12.01:0,12,123	0/0:25,0:24:30.20:0,30,369	0/0:17,0:16:37.15:0,37,380	0/0:19,0:18:25.49:0,25,253	0/0:25,0:24:22.13:0,22,293	0/1:10,0:9:1.50:2,0,28	0/0:28,0:27:38.83:0,39,431	0/0:21,0:19:38.84:0,39,416	0/0:9,0:9:15.28:0,15,160	0/0:16,0:16:27.95:0,28,293	0/0:20,0:18:15.93:0,16,136	0/0:10,0:10:19.33:0,19,195	0/0:10,0:9:6.82:0,7,154	0/0:22,0:18:23.81:0,24,265	0/1:23,0:20:0.22:0,0,169	1/1:4,20:25:64.72:753,65,0	1/1:7,12:15:39.10:470,39,0	1/1:2,4:5:3.01:41,3,0	0/0:15,0:14:22.80:0,23,230	0/0:20,0:20:0.17:0,0,153	0/0:6,0:5:2.92:0,3,34	0/0:17,0:16:24.56:0,25,227	0/0:21,0:21:28.70:0,29,428	1/1:20,14:34:65.04:897,65,0	0/0:7,0:6:9.66:0,10,82
chr10	54864125	.	GC	G	4085.04	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=15.164;DP=694;FS=14.387;HRun=3;HaplotypeScore=78.1993;InbreedingCoeff=0.9997;MQ=81.83;MQ0=0;MQRankSum=-0.291;QD=33.48;ReadPosRankSum=0.298;VQSLOD=2.5222;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,108,1524	0/0:11,0:11:33.10:0,33,456	0/0:17,0:16:42.14:0,42,576	0/0:24,0:24:54.10:0,54,707	0/0:14,0:14:39.13:0,39,560	0/0:15,0:15:42.14:0,42,604	0/0:31,0:31:87.23:0,87,1176	0/0:16,0:16:45.14:0,45,630	0/0:25,0:25:75.25:0,75,1079	0/0:30,0:30:84.27:0,84,1176	0/0:24,0:24:72.22:0,72,996	0/0:33,0:33:90.29:0,90,1278	0/0:23,0:23:66.20:0,66,930	0/0:29,0:29:81.19:0,81,1081	0/0:34,0:34:96.29:0,96,1329	0/0:28,0:28:81.27:0,81,1156	0/0:25,0:25:75.20:0,75,1036	0/0:20,0:19:57.19:0,57,820	1/1:1,21:22:63.17:764,63,0	1/1:2,28:30:72.16:871,72,0	1/1:1,43:44:99:1521,123,0	0/0:20,0:20:60.20:0,60,863	0/0:24,0:24:57.19:0,57,819	0/0:36,0:36:99:0,102,1455	0/0:18,0:18:51.15:0,51,710	0/0:25,0:25:66.21:0,66,929	1/1:0,26:26:75.24:929,75,0	0/0:10,0:10:30.10:0,30,432
chr10	54864307	.	G	GGT	5200.51	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-12.629;DP=712;FS=1.818;HRun=0;HaplotypeScore=80.7643;InbreedingCoeff=0.9996;MQ=79.60;MQ0=0;MQRankSum=-1.293;QD=50.00;ReadPosRankSum=0.239;VQSLOD=5.7815;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:59,0:59:99:0,169,2427	0/0:9,0:9:27.07:0,27,377	0/0:20,0:20:56.98:0,57,822	0/0:24,0:24:53.29:0,53,847	0/0:20,0:20:48.16:0,48,707	0/0:26,0:26:72.21:0,72,1019	0/0:28,0:28:81.26:0,81,1174	0/0:22,0:22:66.21:0,66,953	0/0:36,0:36:99:0,105,1525	0/0:25,0:25:72.24:0,72,1044	0/0:20,0:20:57.19:0,57,840	0/0:23,0:23:69.22:0,69,997	0/0:20,0:20:57.18:0,57,820	0/0:42,0:42:99:0,117,1704	0/0:35,0:35:99:0,99,1458	0/0:23,0:23:69.23:0,69,1014	0/0:29,0:29:84.28:0,84,1237	0/0:21,0:21:60.20:0,60,880	1/1:1,17:18:54.18:990,54,0	1/1:0,16:16:45.15:839,45,0	1/1:2,47:49:99:2248,120,0	0/0:18,0:18:51.17:0,51,751	0/0:16,0:16:40.57:0,41,597	0/0:40,0:40:99:0,120,1740	0/0:18,0:18:54.18:0,54,793	0/0:20,0:20:54.18:0,54,795	1/1:0,21:21:60.21:1124,60,0	0/0:14,0:14:33.11:0,33,486
chr10	54865282	.	TCTTGAAC	T	9558.57	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=15.547;DP=716;FS=1.629;HRun=0;HaplotypeScore=164.6572;InbreedingCoeff=0.9989;MQ=77.90;MQ0=0;MQRankSum=-16.897;QD=54.93;ReadPosRankSum=2.698;VQSLOD=5.0023;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,28:34:72.25:1869,72,0	0/0:19,0:19:54.19:0,54,2160	0/0:26,0:25:75.25:0,75,2381	0/0:23,0:19:43:0,43,1364	0/0:31,0:31:87.30:0,87,3295	0/0:22,0:22:66.23:0,66,2615	0/0:33,0:33:93.31:0,93,3459	0/0:32,0:32:90.29:0,90,3260	0/0:21,0:21:54.19:0,54,2105	0/0:45,0:45:99:0,132,4941	0/0:28,0:28:84.27:0,84,3111	1/1:1,20:21:48.16:1245,48,0	1/1:0,26:26:66.23:1713,66,0	0/0:22,0:22:63.22:0,63,2520	0/0:28,0:28:84.29:0,84,3350	0/0:18,0:18:54.16:0,54,1971	1/1:2,13:15:27.09:701,27,0	1/1:7,9:16:21.07:545,21,0	0/0:33,0:33:93.31:0,93,3393	0/0:34,0:34:99:0,102,3954	0/0:15,0:15:45.15:0,45,1772	1/1:3,26:29:69.24:1779,69,0	1/1:3,17:20:39.13:1006,39,0	1/1:3,10:13:27.09:701,27,0	0/0:29,0:29:87.30:0,87,3401	0/0:40,0:40:99:0,117,4662	0/0:29,0:29:87.30:0,87,3374	0/0:14,0:14:39.13:0,39,1439
chr10	54866206	.	T	TAA	5936.87	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-2.229;DP=579;FS=1.644;HRun=10;HaplotypeScore=85.9948;InbreedingCoeff=0.9535;MQ=74.75;MQ0=1;MQRankSum=-2.273;QD=30.45;ReadPosRankSum=0.005;VQSLOD=5.1640;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,14:17:38.08:511,38,0	1/1:1,4:5:12.04:179,12,0	0/0:23,0:20:13.74:0,14,297	0/0:15,0:15:0.40:0,0,188	0/0:38,0:39:89.90:0,90,960	0/0:23,0:23:51.06:0,51,519	0/0:18,0:20:53.85:0,54,530	0/0:17,0:17:39.06:0,39,391	0/0:14,0:14:36.06:0,36,366	0/0:30,0:32:68.57:0,69,664	0/0:20,0:22:53.81:0,54,529	1/1:1,10:11:24.08:357,24,0	1/1:2,12:14:27.09:402,27,0	0/0:21,0:22:62.88:0,63,622	0/0:12,0:12:36.05:0,36,353	1/1:6,18:25:42.14:625,42,0	1/1:6,32:39:87.29:1282,87,0	1/1:3,26:29:68.59:991,69,0	0/0:16,0:16:36.05:0,36,360	0/0:26,0:27:71.85:0,72,707	0/0:8,0:8:18.01:0,18,183	1/1:8,15:23:43.30:572,43,0	1/1:5,16:23:50.96:695,51,0	1/1:0,7:8:23.57:322,24,0	0/0:28,0:28:78.16:0,78,793	0/0:24,0:25:65.86:0,66,646	0/0:26,0:27:68.80:0,69,672	0/0:14,0:14:42.09:0,42,427
chr10	54868032	.	AACGACGACGACG	A	9397.83	PASS	AC=40;AF=0.741;AN=54;BaseQRankSum=5.448;DP=543;FS=2.832;HRun=0;HaplotypeScore=193.3810;InbreedingCoeff=0.7768;MQ=58.07;MQ0=4;MQRankSum=-4.269;QD=24.04;ReadPosRankSum=0.351;VQSLOD=3.9715;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:21:7.27:170,7,0	./.	0/0:23,0:18:6.02:0,6,88	0/0:19,0:11:3.01:0,3,69	1/1:13,8:21:24.08:585,24,0	1/1:12,12:24:27.09:805,27,0	1/1:13,9:22:12.04:287,12,0	1/1:26,0:24:6:93,6,0	1/1:9,11:19:27.09:871,27,0	1/1:19,13:32:38.19:1200,38,0	1/1:8,4:12:8.99:177,9,0	1/1:12,0:17:9.03:251,9,0	1/1:9,0:14:12.04:335,12,0	1/1:11,10:21:21.07:534,21,0	1/1:14,11:25:27.09:871,27,0	0/0:14,0:17:18.06:0,18,723	1/1:19,0:31:27.09:754,27,0	1/1:13,0:18:5.88:167,6,0	0/0:23,0:22:18.16:0,18,628	0/0:7,0:7:6.02:0,6,323	0/0:29,0:29:11.41:0,11,288	1/1:8,0:16:22.32:590,22,0	1/1:9,0:12:6.01:112,6,0	1/1:14,0:21:5.50:89,6,0	1/1:8,9:18:27.09:913,27,0	1/1:10,4:14:9.03:196,9,0	0/0:24,0:24:15.04:0,15,606	1/1:2,3:6:12.04:395,12,0
chr10	54871394	.	GTTTTTT	G	11066.91	PASS	AB=0.611;AC=46;AF=0.821;AN=56;BaseQRankSum=-2.039;DP=671;FS=14.610;HRun=16;HaplotypeScore=181.1036;InbreedingCoeff=0.7358;MQ=45.15;MQ0=19;MQRankSum=-2.888;QD=21.74;ReadPosRankSum=4.413;VQSLOD=1.1927;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:29:29.03:247,29,0	0/0:2,0:6:18.06:0,18,317	0/0:50,0:12:14.01:0,14,148	0/0:69,0:17:24.32:0,24,280	1/1:6,11:16:29.94:521,30,0	1/1:5,12:16:37.81:665,38,0	1/1:7,7:15:28.87:404,29,0	1/1:9,23:32:65.92:993,66,0	1/1:5,7:12:27.05:457,27,0	1/1:6,21:26:57.02:961,57,0	1/1:4,21:26:51.02:893,51,0	1/1:5,0:14:34.26:176,34,0	1/1:6,1:22:34.30:327,34,0	1/1:6,14:19:20.92:349,21,0	1/1:11,11:22:39.26:705,39,0	0/0:13,0:27:27.94:0,28,677	1/1:7,0:18:28.43:187,28,0	1/1:19,0:24:19.77:171,20,0	1/1:12,0:20:27.05:159,27,0	1/1:4,2:23:9.08:311,9,0	1/1:4,0:9:16.37:79,16,0	1/1:4,0:19:42.66:223,43,0	0/1:9,1:21:36.99:193,0,37	1/1:12,0:22:43.93:226,44,0	1/1:11,8:20:47.93:779,48,0	1/1:9,23:32:65.88:1158,66,0	0/1:6,0:19:13.89:187,0,14	1/1:6,8:14:42.14:695,42,0
chr10	54871424	.	TG	T	707.04	PASS	AB=0.965;AC=15;AF=0.268;AN=56;BaseQRankSum=-0.479;DP=699;FS=137.389;HRun=1;HaplotypeScore=161.9330;InbreedingCoeff=-0.0564;MQ=40.15;MQ0=29;MQRankSum=-0.128;QD=2.16;ReadPosRankSum=4.767;VQSLOD=-0.6975;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,1:30:20.95:0,21,217	1/1:10,0:7:17.46:132,17,0	0/0:77,1:9:9.43:0,9,88	0/1:69,5:15:8.58:9,0,29	0/1:20,1:20:34.84:35,0,129	0/0:18,0:18:1.60:0,2,147	0/1:12,1:13:30.01:30,0,56	0/1:28,1:28:99:102,0,162	0/0:16,0:16:1.78:0,2,153	0/1:21,0:20:58.25:58,0,154	0/0:24,1:25:16.72:0,17,264	0/0:14,0:13:21.63:0,22,122	0/0:19,1:20:16.81:0,17,180	0/1:15,0:14:17.59:18,0,74	0/1:18,0:18:31.78:32,0,132	1/1:31,1:29:57.23:339,57,0	0/0:24,0:23:30.81:0,31,189	0/0:28,2:28:10.44:0,10,216	0/1:25,0:19:0.26:0,0,200	0/0:19,0:19:19.88:0,20,225	0/0:10,0:9:12.28:0,12,80	0/0:27,0:26:4.35:0,4,193	0/0:26,0:23:33.08:0,33,222	0/0:18,1:19:24.75:0,25,110	0/0:14,0:14:1.49:0,1,125	0/1:28,2:28:56.47:56,0,258	0/1:26,1:25:10.11:10,0,236	0/1:12,1:13:43.54:44,0,62
chr10	54871898	.	CGT	C	9538.63	PASS	AB=1.000;AC=25;AF=0.446;AN=56;BaseQRankSum=10.457;DP=711;FS=0.000;HRun=0;HaplotypeScore=93.6972;InbreedingCoeff=0.9385;MQ=66.15;MQ0=12;MQRankSum=-0.257;QD=28.73;ReadPosRankSum=1.595;VQSLOD=6.3171;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,1:31:40.05:0,40,1183	0/0:13,0:13:39.13:0,39,643	0/0:41,1:20:35.36:0,35,436	0/0:34,0:13:12.64:0,13,194	1/1:0,24:24:60.19:764,60,0	1/1:3,21:24:57.18:726,57,0	1/1:8,29:37:72.23:916,72,0	1/1:6,24:30:52.26:818,52,0	1/1:3,23:26:63.20:802,63,0	1/1:4,25:28:69.22:877,69,0	1/1:6,18:24:60.19:763,60,0	0/0:23,0:23:57.19:0,57,953	0/0:30,1:31:46.12:0,46,1317	1/1:4,27:30:69.22:878,69,0	1/1:5,27:32:75.23:944,75,0	0/0:26,0:26:72.23:0,72,1178	0/0:27,0:27:69.19:0,69,1121	0/0:24,0:24:66.18:0,66,1074	0/0:15,0:15:38.72:0,39,601	0/0:25,0:25:69.23:0,69,1123	0/0:24,1:25:28.96:0,29,1016	0/0:17,0:17:51.17:0,51,843	0/0:17,1:18:12.96:0,13,725	0/1:13,0:13:4.74:5,0,469	1/1:3,21:24:54.17:687,54,0	1/1:1,22:23:66.20:824,66,0	0/0:27,0:27:66.23:0,66,1097	1/1:1,14:15:42.13:534,42,0
chr10	54873333	.	T	TACACACACACACAC	9413.85	PASS	AB=0.856;AC=47;AF=0.839;AN=56;BaseQRankSum=1.497;DP=730;FS=10.539;HRun=0;HaplotypeScore=243.9293;InbreedingCoeff=0.4534;MQ=48.04;MQ0=17;MQRankSum=-1.605;QD=15.04;ReadPosRankSum=1.375;VQSLOD=1.6857;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:35:11.55:81,12,0	0/1:12,0:12:14.64:206,0,15	0/0:38,0:20:38.67:0,39,447	0/0:38,0:20:46.93:0,47,622	1/1:28,0:28:19.60:542,20,0	1/1:16,0:16:11.97:113,12,0	1/1:27,0:24:23.57:193,24,0	1/1:33,0:30:64.82:1007,65,0	1/1:31,0:31:49.44:763,49,0	1/1:31,0:29:64.52:825,65,0	1/1:13,0:13:11.93:195,12,0	1/1:26,0:24:24.89:343,25,0	1/1:19,0:18:32.33:442,32,0	1/1:6,19:28:3.01:131,3,0	1/1:29,0:27:32.16:266,32,0	0/1:24,0:23:99:109,0,178	1/1:20,0:21:32.92:472,33,0	1/1:25,0:25:24.39:226,24,0	1/1:19,0:17:0.61:405,1,0	1/1:2,13:21:2.79:72,3,0	1/1:39,0:39:29.61:411,30,0	0/0:3,0:27:0.87:0,1,2	1/1:30,0:28:36.44:527,36,0	1/1:3,0:32:2.47:146,2,0	0/1:6,0:25:0.06:0,0,0	1/1:31,0:29:69.51:1197,70,0	1/1:2,11:18:12.16:470,12,0	1/1:10,0:8:15.05:272,15,0
chr10	54873337	.	T	TACACACACACACAC	9843.04	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-1.307;DP=724;FS=9.199;HRun=0;HaplotypeScore=242.2723;InbreedingCoeff=0.4948;MQ=45.70;MQ0=18;MQRankSum=1.385;QD=15.21;ReadPosRankSum=2.327;VQSLOD=2.3055;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:34,0:33:6.44:46,6,0	1/1:14,0:14:22.54:400,23,0	0/0:40,0:20:11.72:0,12,167	0/0:37,0:17:8.12:0,8,162	1/1:29,0:29:24.43:585,24,0	1/1:18,0:18:11.97:110,12,0	1/1:27,0:24:6.23:77,6,0	1/1:33,0:30:44.63:886,45,0	1/1:28,0:28:33.85:653,34,0	1/1:30,0:28:53.04:846,53,0	1/1:12,0:12:8.66:193,9,0	1/1:25,0:23:11.68:270,12,0	1/1:20,0:19:24.53:490,25,0	1/1:25,0:24:3.01:131,3,0	1/1:28,0:26:9.85:168,10,0	1/1:5,18:25:3.48:163,3,0	1/1:23,0:23:36.90:538,37,0	1/1:11,0:28:14.81:299,15,0	1/1:20,0:18:26.05:463,26,0	1/1:19,0:19:5.78:104,6,0	1/1:42,0:41:30.03:530,30,0	1/1:26,0:26:2.16:22,2,0	1/1:30,0:28:24.07:514,24,0	1/1:28,0:28:3.01:147,3,0	1/1:21,0:21:2.93:25,3,0	1/1:34,0:32:66.21:1365,66,0	1/1:18,0:17:16.25:503,16,0	1/1:9,0:7:15.05:313,15,0
chr10	54874013	.	GTTCATTCA	G	3683.28	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=9.555;DP=734;FS=1.856;HRun=0;HaplotypeScore=184.9619;InbreedingCoeff=0.9229;MQ=66.97;MQ0=0;MQRankSum=-10.398;QD=34.75;ReadPosRankSum=1.157;VQSLOD=3.5076;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:60.19:0,60,2286	0/0:7,0:14:30.01:0,30,374	0/0:25,0:24:18.05:0,18,441	0/0:16,0:16:10.28:0,10,378	0/0:32,0:32:63.22:0,63,2621	0/0:21,0:21:36.12:0,36,1493	0/0:20,0:20:42.14:0,42,1692	0/0:39,0:39:66.22:0,66,2548	0/0:35,0:35:81.28:0,81,3167	0/0:36,0:39:93.29:0,93,3575	0/0:24,0:24:48.16:0,48,1984	0/0:26,0:26:60.19:0,60,2397	0/0:32,0:32:78.27:0,78,3055	0/0:23,0:23:57.18:0,57,2215	0/0:35,0:35:87.28:0,87,3359	0/0:9,0:34:68.63:0,69,630	0/0:27,0:27:66.23:0,66,2618	0/0:15,0:15:36.12:0,36,1430	1/1:10,5:15:15.05:359,15,0	1/1:7,21:28:54.14:1327,54,0	1/1:19,5:24:2.22:76,2,0	0/0:28,0:27:66.23:0,66,2664	0/0:11,0:11:24.08:0,24,1000	0/0:21,0:21:51.16:0,51,1986	0/0:30,0:30:69.23:0,69,2609	0/0:40,0:40:90.31:0,90,3751	1/1:16,23:39:75.26:1922,75,0	0/0:14,0:14:39.13:0,39,1310
chr10	54874987	.	G	GTGAA	14787.30	PASS	AB=0.707;AC=35;AF=0.625;AN=56;BaseQRankSum=-4.295;DP=721;FS=1.366;HRun=0;HaplotypeScore=121.4670;InbreedingCoeff=0.8764;MQ=73.68;MQ0=2;MQRankSum=-1.599;QD=29.87;ReadPosRankSum=-2.674;VQSLOD=4.4509;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:54.15:0,54,815	1/1:13,0:17:24.08:400,24,0	0/0:20,0:20:9.03:0,9,132	0/0:31,0:29:8.82:0,9,107	0/1:17,12:28:13.55:541,0,14	1/1:7,17:26:3.42:1004,3,0	1/1:8,11:19:12.04:283,12,0	1/1:31,0:30:18.06:374,18,0	1/1:15,15:30:45.15:1049,45,0	1/1:15,20:37:69.22:1539,69,0	1/1:9,12:25:41.84:772,42,0	0/0:17,0:17:33.10:0,33,489	0/0:25,0:25:42.12:0,42,611	1/1:13,18:33:39.13:920,39,0	1/1:18,21:40:60.21:1408,60,0	1/1:9,0:25:33.11:577,33,0	0/0:32,0:32:69.14:0,69,1026	0/0:15,0:15:27.09:0,27,421	1/1:10,0:15:15.02:240,15,0	1/1:9,1:30:57.06:906,57,0	1/1:13,0:16:17.92:220,18,0	0/0:16,0:16:33.09:0,33,491	0/0:20,0:20:36.10:0,36,534	0/0:23,0:24:54.08:0,54,745	1/1:4,20:24:30.10:708,30,0	1/1:6,21:27:66.20:1468,66,0	1/1:26,2:44:63.08:1033,63,0	1/1:8,19:27:57.20:1344,57,0
chr10	54875281	.	G	GT	4000.19	PASS	AB=0.739;AC=31;AF=0.554;AN=56;BaseQRankSum=-3.891;DP=537;FS=10.981;HRun=13;HaplotypeScore=71.2046;InbreedingCoeff=0.4742;MQ=85.12;MQ0=8;MQRankSum=0.144;QD=12.46;ReadPosRankSum=0.532;VQSLOD=2.9045;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:16.36:0,16,226	0/1:10,0:10:13.12:13,0,65	0/0:64,0:36:26.97:0,27,208	0/0:50,0:23:16.05:0,16,150	1/1:5,15:22:45.84:401,46,0	1/1:4,20:25:15.17:259,15,0	1/1:2,6:8:18.02:166,18,0	1/1:12,15:29:36.34:449,36,0	1/1:1,13:14:30.03:279,30,0	0/1:7,12:19:20.48:236,0,20	1/1:2,12:15:35.69:291,36,0	0/0:13,0:14:31.28:0,31,226	0/1:11,1:13:15.38:15,0,139	1/1:1,12:12:15.02:139,15,0	0/1:5,13:18:6.79:218,0,7	0/0:15,1:16:4.85:0,5,178	0/0:14,0:14:29.69:0,30,203	0/0:20,0:20:44.54:0,45,308	1/1:7,2:20:35.26:206,35,0	1/1:5,2:31:68.74:397,69,0	1/1:2,0:2:5.99:48,6,0	0/0:6,0:6:13.90:0,14,88	0/1:4,1:5:15.94:16,0,50	0/0:9,0:9:17.82:0,18,123	0/1:7,11:18:30.21:165,0,30	0/1:7,15:22:9.05:349,0,9	1/1:6,1:24:20.97:185,21,0	1/1:4,9:13:18.02:167,18,0
chr10	54875750	.	C	CCT	1824.10	PASS	AB=0.618;AC=13;AF=0.232;AN=56;BaseQRankSum=-0.834;DP=530;FS=19.780;HRun=0;HaplotypeScore=102.9587;InbreedingCoeff=0.2609;MQ=72.97;MQ0=2;MQRankSum=-2.569;QD=8.18;ReadPosRankSum=2.537;VQSLOD=1.5430;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,0:30:14.57:365,15,0	0/0:7,0:8:21.06:0,21,319	0/0:12,0:14:5.93:0,6,356	0/1:20,0:20:9.05:9,0,404	0/0:4,0:22:49.52:0,50,230	0/0:0,0:10:19.80:0,20,60	0/0:2,0:14:30.42:0,30,126	0/1:4,0:28:38.07:38,0,148	0/0:1,0:12:24.42:0,24,74	0/0:3,0:19:36.43:0,36,178	0/0:3,0:22:44.77:0,45,183	0/1:6,1:25:35.10:230,0,35	0/1:6,0:22:62.48:224,0,62	0/0:2,0:11:25.59:0,26,128	0/0:3,0:17:32.67:0,33,153	0/0:20,0:20:60.18:0,60,895	1/1:3,0:24:6.74:265,7,0	0/1:3,0:17:26.95:191,0,27	0/0:8,0:26:38.89:0,39,382	0/0:5,0:14:31.76:0,32,154	0/0:1,0:10:14.57:0,15,69	0/1:4,0:19:98.49:178,0,98	0/1:3,1:22:25.67:247,0,26	1/1:0,0:14:32.73:244,33,0	0/0:3,0:18:37.51:0,38,186	0/0:7,0:30:70.32:0,70,359	0/0:9,0:24:55.80:0,56,354	0/0:2,0:16:32.26:0,32,127
chr10	54876590	.	CTG	C	951.19	PASS	AB=0.891;AC=16;AF=0.286;AN=56;BaseQRankSum=7.775;DP=708;FS=1.080;HRun=0;HaplotypeScore=90.0067;InbreedingCoeff=-0.0612;MQ=71.07;MQ0=1;MQRankSum=-0.731;QD=2.84;ReadPosRankSum=3.954;VQSLOD=1.8448;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,102,1548	1/1:0,7:8:20.90:228,21,0	0/0:32,1:27:27.01:0,27,315	0/0:24,0:20:29.95:0,30,381	0/0:20,1:21:12.29:0,12,576	0/0:23,0:23:6.36:0,6,561	0/1:24,4:28:25.45:25,0,728	0/1:31,2:33:7.47:7,0,771	0/1:16,2:19:22.83:23,0,283	0/0:39,0:39:62.90:0,63,913	0/0:18,1:19:0.36:0,0,462	0/0:31,2:34:18.79:0,19,1188	0/1:15,3:18:59.09:59,0,546	0/1:18,1:19:2.71:3,0,360	0/0:23,1:24:15.44:0,15,723	1/1:6,19:25:48.15:572,48,0	0/1:32,6:38:31.97:32,0,895	0/0:25,2:27:24.35:0,24,768	0/0:24,0:23:41.81:0,42,568	0/0:25,0:25:17.48:0,17,548	0/1:39,5:44:27.39:27,0,971	0/0:14,0:14:30.08:0,30,452	0/1:10,2:12:44.41:44,0,263	0/1:26,3:30:19.41:19,0,832	0/0:21,0:21:27.08:0,27,396	0/1:19,1:21:13.81:14,0,398	0/1:27,3:30:44.06:44,0,734	0/1:8,1:9:17.72:18,0,192
chr10	54877070	.	CTGTG	C	7047.39	PASS	AB=0.969;AC=27;AF=0.482;AN=56;BaseQRankSum=-11.009;DP=1052;FS=5.227;HRun=0;HaplotypeScore=271.7941;InbreedingCoeff=0.7780;MQ=58.22;MQ0=19;MQRankSum=-2.603;QD=13.53;ReadPosRankSum=3.523;VQSLOD=3.8350;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:62,0:61:39.90:0,40,1132	0/0:13,0:12:15:0,15,260	0/0:45,0:26:42.61:0,43,483	0/0:44,0:28:26.40:0,26,195	1/1:18,6:24:19.29:272,19,0	1/1:17,3:18:11.89:171,12,0	1/1:42,11:47:41.63:630,42,0	1/1:36,3:33:24.38:721,24,0	1/1:28,11:36:22.85:514,23,0	1/1:31,13:42:29.48:1068,29,0	1/1:18,7:23:12.04:201,12,0	0/0:40,0:41:63.25:0,63,627	0/1:30,0:30:22.42:22,0,583	1/1:37,14:47:34.71:550,35,0	1/1:27,16:38:44.09:680,44,0	0/0:42,0:39:66.13:0,66,1337	0/0:27,0:26:50.72:0,51,634	0/1:25,0:26:6.78:7,0,507	0/1:31,0:32:6.09:6,0,190	0/0:33,0:34:42.78:0,43,515	0/0:84,0:83:99:0,141,1501	0/0:27,1:27:36.03:0,36,508	0/0:21,0:20:35.53:0,36,466	0/0:53,0:54:4.99:0,5,957	1/1:16,11:24:15.04:226,15,0	1/1:36,19:54:99:1740,106,0	0/0:28,0:27:30.54:0,31,677	1/1:4,4:8:15.05:239,15,0
chr10	54877116	.	CTG	C	2301.84	PASS	AB=0.833;AC=13;AF=0.241;AN=54;BaseQRankSum=1.279;DP=1562;FS=13.249;HRun=0;HaplotypeScore=350.6182;InbreedingCoeff=-0.3014;MQ=36.62;MQ0=80;MQRankSum=-7.302;QD=2.78;ReadPosRankSum=0.540;VQSLOD=0.3556;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:73,7:75:99:0,105,1614	0/0:9,0:9:5.21:0,5,23	0/0:29,0:4:11.71:0,12,159	0/0:49,0:13:26.94:0,27,308	0/0:25,13:35:3.46:0,3,24	0/1:28,9:34:31.20:31,0,42	0/1:79,22:71:99:135,0,131	0/1:89,18:59:99:412,0,603	0/1:52,13:59:88.17:88,0,122	0/1:77,18:72:99:554,0,587	./.	0/0:41,8:45:23.74:0,24,692	0/1:39,5:41:5.23:5,0,777	0/1:48,22:67:46.96:199,0,47	0/1:45,21:60:8.25:129,0,8	0/0:40,1:35:30.81:0,31,710	0/1:36,4:39:55.12:55,0,596	0/0:43,1:43:15.73:0,16,910	0/0:32,0:21:36.10:0,36,561	0/0:41,0:38:54.09:0,54,772	0/0:140,4:127:99:0,119,2277	0/0:31,1:31:24.08:0,24,389	0/1:28,2:25:6.51:7,0,390	0/0:68,4:71:87.26:0,87,1381	0/1:32,11:39:19.71:20,0,32	0/1:65,21:70:99:647,0,366	0/0:30,0:26:44.96:0,45,646	0/1:11,5:16:68.78:167,0,69
chr10	54877152	.	CTG	C	6379.82	PASS	AB=0.758;AC=24;AF=0.444;AN=54;BaseQRankSum=-5.017;DP=1570;FS=45.372;HRun=0;HaplotypeScore=315.9276;InbreedingCoeff=-0.3501;MQ=33.89;MQ0=111;MQRankSum=6.071;QD=5.10;ReadPosRankSum=7.083;VQSLOD=2.2072;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:56,22:75:5.63:671,6,0	./.	0/0:61,0:8:3.72:0,4,93	0/0:73,0:14:14.38:0,14,142	0/1:24,3:34:4.84:63,0,5	0/0:33,2:37:0.36:0,0,36	0/1:75,7:69:99:132,0,126	0/1:103,0:61:37.36:37,0,293	0/1:59,5:74:53.33:53,0,170	0/1:76,5:66:99:146,0,355	0/0:25,1:26:2.74:0,3,12	1/1:35,22:51:47.82:674,48,0	0/1:28,15:38:47.38:416,0,47	0/0:63,3:69:25.21:0,25,228	0/1:50,11:69:14.87:15,0,112	0/0:25,2:22:6.84:0,7,29	0/1:27,17:43:99:572,0,112	0/1:25,19:43:28.20:619,0,28	0/1:18,8:18:31.20:282,0,31	0/1:20,11:27:15.60:328,0,16	0/1:99,41:118:48.18:1051,0,48	0/1:14,13:26:15.33:330,0,15	0/1:19,9:22:17.95:125,0,18	1/1:38,23:59:17.99:476,18,0	0/1:28,1:33:0:0,0,0	0/1:65,5:65:99:196,0,233	0/1:12,6:15:2.72:161,0,3	0/1:6,1:11:30.70:31,0,66
chr10	54877170	.	GTC	G	1942.54	PASS	AB=0.986;AC=18;AF=0.321;AN=56;BaseQRankSum=1.895;DP=1567;FS=23.775;HRun=0;HaplotypeScore=330.7734;InbreedingCoeff=-0.0771;MQ=35.25;MQ0=101;MQRankSum=8.075;QD=3.04;ReadPosRankSum=9.350;VQSLOD=0.3481;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:60,1:57:75.85:252,0,76	0/0:2,0:2:2.96:0,3,19	0/0:70,0:11:8.36:0,8,140	0/0:71,0:11:14.58:0,15,172	0/1:49,0:44:18.26:18,0,115	0/0:48,0:43:6.16:0,6,85	0/0:101,1:79:18.78:0,19,527	0/0:119,0:84:99:0,152,1805	0/0:92,2:88:6.39:0,6,444	0/0:94,0:78:41.15:0,41,1090	0/0:33,0:26:2:0,2,51	1/1:58,1:49:16.58:315,17,0	0/1:46,0:41:99:183,0,102	0/0:78,0:70:40.51:0,41,393	0/0:84,0:74:16.39:0,16,286	1/1:16,7:20:2.77:19,3,0	0/1:46,1:45:99:193,0,233	0/1:40,2:40:99:300,0,105	0/1:31,0:22:45.19:45,0,136	0/1:28,0:27:45.91:126,0,46	0/1:114,1:101:99:271,0,434	0/1:25,0:24:33.79:100,0,34	0/1:23,2:21:2.93:38,0,3	0/1:57,0:53:67.25:163,0,67	0/0:38,0:31:5.39:0,5,37	0/0:95,0:75:58.48:0,58,1042	1/1:11,1:10:5.78:74,6,0	0/1:19,0:17:6.16:6,0,162
chr10	54877208	.	C	CTG	2755.37	PASS	AB=0.943;AC=16;AF=0.286;AN=56;BaseQRankSum=1.526;DP=1827;FS=59.831;HRun=0;HaplotypeScore=396.0889;InbreedingCoeff=-0.0624;MQ=37.27;MQ0=98;MQRankSum=1.963;QD=3.17;ReadPosRankSum=0.454;VQSLOD=0.0585;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:53:51.14:0,51,598	0/1:13,1:11:29:29,0,44	0/0:37,0:13:11.43:0,11,91	0/0:47,0:13:12.22:0,12,78	0/1:50,0:44:0.21:0,0,143	0/1:55,1:53:33.89:34,0,38	0/0:160,1:139:28.82:0,29,783	0/0:143,0:99:99:0,122,1524	0/1:120,1:109:85.16:85,0,368	0/0:137,1:107:51.27:0,51,1308	0/1:53,0:46:5.87:6,0,92	0/0:58,0:53:64.07:0,64,716	0/0:40,0:36:53.88:0,54,585	0/1:106,2:99:78.72:79,0,201	0/0:96,0:82:14.07:0,14,167	0/1:29,7:27:63.86:209,0,64	0/0:34,0:34:16.62:0,17,611	0/0:35,0:33:63.16:0,63,747	1/1:24,3:21:1.90:445,2,0	0/1:22,8:27:10.03:280,0,10	0/1:92,31:109:99:1211,0,187	0/0:28,0:25:32.90:0,33,380	0/0:20,0:19:21.93:0,22,244	0/0:42,0:39:21.06:0,21,257	0/1:59,0:56:16.38:20,0,16	0/1:128,1:108:99:136,0,874	1/1:12,5:16:29.97:359,30,0	0/1:18,0:15:22.95:23,0,41
chr10	54877246	.	GTC	G	1344.58	PASS	AB=0.979;AC=14;AF=0.250;AN=56;BaseQRankSum=-2.718;DP=2048;FS=8.530;HRun=0;HaplotypeScore=402.3283;InbreedingCoeff=-0.1676;MQ=34.58;MQ0=134;MQRankSum=2.470;QD=2.41;ReadPosRankSum=7.207;VQSLOD=0.3024;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:55,1:54:84.58:111,0,85	0/0:19,0:16:5.12:0,5,335	0/1:31,1:5:14.75:15,0,37	0/0:37,3:2:3.85:0,4,11	0/0:62,0:53:31.63:0,32,559	0/0:72,0:63:20.84:0,21,327	0/0:223,0:187:99:0,183,3328	0/0:141,0:55:99:0,124,1890	0/0:131,0:110:99:0,122,1716	0/0:167,0:117:99:0,152,3373	0/0:67,0:55:48.10:0,48,757	0/1:50,2:49:96.23:178,0,96	0/1:31,1:29:29.36:190,0,29	0/0:139,0:113:80.22:0,80,1135	0/0:110,0:95:41.02:0,41,589	0/0:40,2:33:35.58:0,36,509	0/1:27,0:26:85.94:86,0,128	0/1:27,1:25:99:145,0,186	0/1:35,1:23:99:113,0,159	0/1:32,0:28:29.73:97,0,30	0/1:144,4:121:99:289,0,348	0/1:29,0:26:5.14:74,0,5	1/1:17,0:17:3.49:41,3,0	0/1:43,0:40:18.80:19,0,37	0/0:75,0:65:48.11:0,48,781	0/0:175,0:131:99:0,229,3638	0/1:22,0:20:54.47:142,0,54	0/0:26,0:23:47.87:0,48,760
chr10	54877250	.	CTG	C	4576.32	PASS	AB=0.783;AC=20;AF=0.370;AN=54;BaseQRankSum=-6.688;DP=2109;FS=1.849;HRun=0;HaplotypeScore=393.8653;InbreedingCoeff=0.2346;MQ=34.23;MQ0=144;MQRankSum=0.608;QD=5.47;ReadPosRankSum=4.657;VQSLOD=2.5701;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:31,29:56:34.31:385,34,0	0/0:19,0:16:24.05:0,24,364	0/1:33,1:4:31.23:31,0,38	./.	0/0:63,2:55:6.12:0,6,456	0/1:71,2:63:2.23:2,0,217	0/0:205,10:178:13.49:0,13,2553	0/0:148,2:60:99:0,105,1775	0/0:125,0:105:96.29:0,96,1523	0/1:171,7:124:4.24:4,0,2927	0/0:69,0:56:51.12:0,51,760	0/1:25,27:49:26.43:486,0,26	1/1:18,16:31:42.51:430,43,0	0/0:139,3:117:37.02:0,37,840	0/0:110,2:94:28.88:0,29,403	0/0:42,0:33:29.66:0,30,430	0/1:19,11:31:28.66:306,0,29	0/1:17,13:26:78.09:378,0,78	0/1:26,8:20:39.27:283,0,39	1/1:19,14:29:23.50:327,23,0	0/1:94,59:121:49.02:1104,0,49	1/1:16,15:26:23.87:261,24,0	1/1:6,8:17:14.88:164,15,0	0/1:24,20:41:15.92:65,0,16	0/0:81,1:71:44.97:0,45,598	0/0:176,1:134:99:0,184,3261	0/1:9,14:21:13.19:350,0,13	0/0:27,0:24:31.27:0,31,720
chr10	54877264	.	GTC	G	1661.68	PASS	AB=0.986;AC=16;AF=0.296;AN=54;BaseQRankSum=-2.907;DP=2173;FS=1.398;HRun=0;HaplotypeScore=439.5999;InbreedingCoeff=-0.2523;MQ=33.28;MQ0=167;MQRankSum=1.975;QD=2.04;ReadPosRankSum=3.695;VQSLOD=0.7844;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:68,0:59:55.12:83,0,55	0/0:18,0:15:23.91:0,24,417	0/1:34,0:2:22.82:23,0,43	./.	0/1:64,0:52:13.07:13,0,474	0/1:71,1:63:35.29:35,0,149	0/0:214,0:172:52.62:0,53,2853	0/0:162,0:60:99:0,109,1961	0/0:119,0:99:99:0,100,1646	0/0:170,1:119:68.63:0,69,3287	0/0:64,1:55:50.86:0,51,873	0/1:63,2:60:99:199,0,126	0/1:60,0:53:99:183,0,147	0/0:136,1:111:5.72:0,6,778	0/0:104,0:88:9:0,9,424	0/0:41,0:32:27.01:0,27,479	0/1:46,0:43:99:105,0,219	0/1:36,0:29:99:161,0,124	0/1:25,1:16:99:134,0,104	0/1:31,0:27:22.85:103,0,23	0/1:165,1:132:99:395,0,244	1/1:30,2:27:22.80:147,23,0	0/1:17,1:17:16.49:34,0,16	0/1:73,1:69:38.67:39,0,79	0/0:85,1:75:35.94:0,36,531	0/0:176,0:129:99:0,148,3550	0/1:21,1:19:24.88:169,0,25	0/0:29,0:27:50.07:0,50,761
chr10	54877284	.	C	CTG	5026.39	PASS	AB=0.883;AC=25;AF=0.446;AN=56;BaseQRankSum=-5.138;DP=2105;FS=39.627;HRun=0;HaplotypeScore=404.0784;InbreedingCoeff=-0.1708;MQ=33.90;MQ0=178;MQRankSum=-1.119;QD=3.23;ReadPosRankSum=-5.604;VQSLOD=1.9934;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:51,20:72:91.17:145,0,91	0/1:10,8:17:24.96:135,0,25	0/1:28,0:1:0:0,0,0	0/1:38,0:3:0:0,0,0	0/1:61,0:51:3.87:4,0,134	1/1:66,1:60:8.78:110,9,0	0/1:193,1:154:99:541,0,340	0/0:161,0:61:34.10:0,34,531	0/1:106,3:90:99:126,0,148	0/1:152,0:108:99:368,0,661	0/0:59,0:53:3.43:0,3,202	0/1:33,30:64:33.54:519,0,34	0/1:28,27:63:72.48:718,0,72	0/1:116,0:96:11.92:12,0,130	0/1:99,0:84:63.03:92,0,63	1/1:26,14:32:30.02:411,30,0	0/1:19,22:46:39.90:626,0,40	0/1:21,8:28:99:289,0,154	0/0:29,1:16:26.87:0,27,294	0/0:29,0:26:33.10:0,33,405	0/0:161,6:134:58.01:0,58,1329	0/1:18,13:29:24.97:115,0,25	1/1:7,7:16:3.01:46,3,0	1/1:40,32:83:17.74:293,18,0	0/0:75,0:63:13.58:0,14,77	0/1:156,0:112:99:391,0,604	0/0:23,0:21:26.95:0,27,285	0/1:27,0:26:85.22:85,0,147
chr10	54877294	.	G	GTC	5123.69	PASS	AB=0.951;AC=22;AF=0.393;AN=56;BaseQRankSum=-5.223;DP=2039;FS=8.213;HRun=0;HaplotypeScore=392.1423;InbreedingCoeff=-0.4878;MQ=34.45;MQ0=160;MQRankSum=0.378;QD=3.11;ReadPosRankSum=2.169;VQSLOD=1.6745;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:86,0:75:25.64:26,0,292	0/1:16,0:16:33.90:61,0,34	0/0:24,0:6:8.92:0,9,67	0/1:42,0:6:3.19:3,0,20	0/1:56,5:51:45.75:46,0,322	0/1:61,7:63:4.77:122,0,5	0/1:161,21:145:99:1076,0,664	0/1:144,1:56:99:185,0,872	0/1:89,12:83:99:262,0,297	0/1:132,15:108:99:797,0,1135	0/0:52,4:49:7.49:0,7,366	0/1:73,0:63:99:237,0,158	0/1:73,0:67:99:353,0,258	0/1:94,19:95:73.82:74,0,123	0/1:85,19:88:43.26:188,0,43	1/1:36,0:30:5.79:166,6,0	0/1:53,0:48:99:319,0,232	0/1:30,0:25:99:118,0,261	0/0:31,0:15:39.09:0,39,497	0/0:28,0:26:39.10:0,39,551	0/0:160,0:126:99:0,119,1916	0/1:33,0:32:43.99:44,0,77	0/1:16,0:13:16.13:16,0,19	0/1:95,0:88:19.28:132,0,19	0/0:62,11:62:14.09:0,14,234	0/1:127,13:102:99:718,0,1129	0/0:19,0:17:35.97:0,36,454	0/1:24,4:27:99:182,0,319
chr10	54877314	.	GTC	G	2501.51	PASS	AB=0.958;AC=23;AF=0.411;AN=56;BaseQRankSum=-1.587;DP=1680;FS=22.667;HRun=0;HaplotypeScore=329.4521;InbreedingCoeff=-0.1275;MQ=37.51;MQ0=112;MQRankSum=2.334;QD=2.04;ReadPosRankSum=-1.176;VQSLOD=1.0355;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:76,1:66:5.34:5,0,119	0/1:12,0:12:1.07:1,0,43	0/0:38,0:11:17.12:0,17,231	0/0:50,0:14:11.82:0,12,195	0/1:46,0:40:26.21:26,0,181	0/0:50,1:49:11.45:0,11,141	0/1:147,19:132:96.28:96,0,1303	0/1:118,4:60:26.81:27,0,1643	0/1:74,0:65:12.31:12,0,519	0/1:114,3:92:99:115,0,2105	0/1:38,2:36:36.93:43,0,37	0/0:65,2:55:0.88:0,1,211	0/1:66,0:59:27:27,0,324	0/1:78,2:69:9.10:9,0,85	0/0:86,3:77:20.81:0,21,460	0/0:26,1:24:30.49:0,30,384	0/1:45,2:41:24.79:25,0,327	0/1:21,2:18:43.31:43,0,139	0/1:22,4:13:6.11:201,0,6	1/1:13,8:20:24:273,24,0	1/1:84,50:112:99:1355,111,0	0/0:24,1:24:2.35:0,2,9	1/1:12,0:10:2.99:24,3,0	0/0:72,8:75:21.48:0,21,106	0/1:46,3:44:59.67:60,0,61	0/1:91,3:77:99:203,0,1457	1/1:6,6:10:13.66:124,14,0	0/0:24,0:24:22.83:0,23,417
chr10	54877318	.	CTCTG	C	654.92	PASS	AB=0.959;AC=13;AF=0.232;AN=56;BaseQRankSum=-0.462;DP=1683;FS=7.760;HRun=0;HaplotypeScore=352.2963;InbreedingCoeff=-0.0861;MQ=37.31;MQ0=116;MQRankSum=-0.647;QD=1.14;ReadPosRankSum=-6.266;VQSLOD=0.3325;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:67,8:62:1.51:2,0,410	0/1:12,0:12:1.15:1,0,68	0/0:41,0:11:24.04:0,24,357	0/0:55,0:15:17.94:0,18,307	0/0:45,1:41:22.59:0,23,343	0/0:53,3:51:14.14:0,14,214	0/0:152,7:124:48.79:0,49,2192	0/0:126,0:64:98.06:0,98,2933	0/0:72,2:64:9.68:0,10,796	0/0:121,2:98:99:0,145,3896	0/0:39,0:35:20.57:0,21,193	0/1:60,4:52:29.36:29,0,557	0/1:61,5:59:61.04:61,0,807	0/1:76,1:66:1.20:1,0,165	0/0:87,3:78:14.73:0,15,777	0/0:27,0:23:36.98:0,37,631	0/1:42,4:40:74.28:74,0,743	0/1:19,2:17:99:126,0,388	0/1:24,1:13:95.74:96,0,100	0/1:22,0:21:34.76:43,0,35	0/1:140,2:121:99:309,0,179	0/0:22,1:22:3.33:0,3,33	1/1:8,4:10:2.99:24,3,0	0/0:68,10:73:23.74:0,24,291	0/0:51,0:44:1.78:0,2,149	0/0:98,0:78:93.26:0,93,2742	0/1:12,0:11:2.85:28,0,3	0/0:19,0:19:41.32:0,41,740
chr10	54877350	.	CTG	C	2802.35	PASS	AB=0.887;AC=17;AF=0.304;AN=56;BaseQRankSum=-4.364;DP=1703;FS=2.393;HRun=0;HaplotypeScore=318.8184;InbreedingCoeff=-0.4914;MQ=33.82;MQ0=132;MQRankSum=-1.407;QD=2.08;ReadPosRankSum=-0.282;VQSLOD=1.6994;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:42,3:44:37.04:37,0,109	0/0:11,0:11:3.01:0,3,50	0/0:41,0:6:11.33:0,11,94	0/0:47,0:10:5.69:0,6,61	0/1:36,7:41:85.76:86,0,101	0/1:34,9:48:38.94:65,0,39	0/1:127,25:138:99:478,0,469	0/1:154,4:71:60.30:60,0,1318	0/1:57,12:74:99:123,0,240	0/1:88,20:101:99:625,0,1214	0/0:18,8:27:0:0,0,0	0/1:41,0:39:3.26:3,0,21	0/0:41,1:40:5.94:0,6,57	0/1:49,24:68:90.96:91,0,105	0/1:65,27:90:99:279,0,128	0/0:33,0:27:18.04:0,18,214	0/0:27,2:30:0.08:0,0,107	0/1:18,0:16:3.46:3,0,188	0/0:38,0:17:3.51:0,4,509	0/1:28,3:29:87.60:88,0,347	0/1:148,29:160:99:294,0,1266	0/0:14,0:15:3.88:0,4,26	0/0:2,0:3:2.96:0,3,19	0/0:56,0:57:8.47:0,8,117	0/1:45,9:53:51.59:52,0,247	0/1:79,20:76:99:512,0,513	0/1:12,1:11:23.53:24,0,73	0/1:11,2:16:98.15:126,0,98
chr10	54877375	.	TGC	T	30.73	PASS	AB=0.921;AC=8;AF=0.148;AN=54;BaseQRankSum=5.816;DP=1555;FS=11.895;HRun=0;HaplotypeScore=274.0455;InbreedingCoeff=0.1659;MQ=31.50;MQ0=93;MQRankSum=-3.794;QD=0.09;ReadPosRankSum=-2.622;VQSLOD=0.8298;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:12:5.89:0,6,52	0/1:8,4:11:31.52:38,0,32	0/0:39,0:10:29.96:0,30,410	0/0:39,0:3:6.01:0,6,71	0/0:60,0:47:8.06:0,8,410	0/0:53,0:47:17.04:0,17,300	0/0:177,5:147:99:0,133,2424	0/0:155,6:101:92.32:0,92,3976	0/1:88,1:75:5.86:6,0,727	0/1:135,3:114:3.86:4,0,3267	0/1:41,1:37:0.02:0,0,0	0/0:9,0:8:3.12:0,3,21	0/0:7,0:5:2.97:0,3,20	0/0:83,1:65:35.21:0,35,604	0/0:100,1:85:20.56:0,21,609	1/1:27,0:20:11.47:71,11,0	0/1:8,2:8:23.21:23,0,34	0/0:11,0:9:18.01:0,18,176	0/0:34,0:19:10.32:0,10,697	0/0:27,0:24:18.03:0,18,462	0/0:164,8:155:99:0,149,2465	./.	0/0:3,0:2:1.55:0,2,4	0/0:15,0:14:5.98:0,6,76	0/0:71,1:63:50.86:0,51,799	0/0:118,4:86:12.73:0,13,2463	0/0:12,0:10:14.53:0,15,165	0/1:16,0:16:2.18:2,0,445
chr10	54877377	.	C	CGT	138.31	PASS	AB=0.934;AC=9;AF=0.188;AN=48;BaseQRankSum=4.630;DP=1555;FS=17.349;HRun=0;HaplotypeScore=269.9949;InbreedingCoeff=0.5091;MQ=31.32;MQ0=92;MQRankSum=-2.572;QD=0.77;ReadPosRankSum=-0.697;VQSLOD=1.0117;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,3:10:3.01:49,3,0	1/1:13,0:12:2.50:9,2,0	0/0:38,0:10:21.06:0,21,251	0/0:40,0:3:3.01:0,3,34	0/0:59,0:47:22.88:0,23,262	0/0:50,2:47:17.97:0,18,201	0/0:174,6:147:99:0,125,1518	0/0:154,0:98:99:0,188,2416	0/1:85,3:76:7.08:7,0,541	0/0:138,2:112:99:0,134,2119	0/1:42,0:36:0.01:0,0,0	./.	./.	0/0:91,1:69:35.75:0,36,409	0/0:99,1:84:29.54:0,30,350	0/0:9,5:18:11.08:0,11,60	0/1:8,1:8:6.15:43,0,6	1/1:7,4:9:10.28:149,10,0	0/0:33,0:19:38.98:0,39,458	0/0:26,0:24:26.25:0,26,281	0/0:167,0:152:99:0,117,1404	./.	./.	0/0:16,1:16:3.01:0,3,37	0/0:68,3:63:44.83:0,45,509	0/0:123,3:92:90.12:0,90,1590	0/0:11,0:9:12.03:0,12,130	0/0:16,0:16:14.96:0,15,282
chr10	54877400	.	C	CTG	3781.71	PASS	AB=0.961;AC=20;AF=0.370;AN=54;BaseQRankSum=-2.868;DP=1557;FS=2.021;HRun=0;HaplotypeScore=248.0210;InbreedingCoeff=-0.4115;MQ=30.22;MQ0=94;MQRankSum=0.024;QD=2.84;ReadPosRankSum=0.703;VQSLOD=2.6940;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:14,0:11:16.94:17,0,29	0/0:11,0:10:6.49:0,6,74	0/0:27,0:7:3.48:0,3,38	0/0:38,0:3:3.90:0,4,38	1/1:59,0:46:10.15:159,10,0	0/1:49,3:49:43.23:43,0,59	0/1:155,8:128:99:704,0,146	0/1:144,3:86:99:437,0,221	0/1:79,5:66:31.16:31,0,167	0/1:127,10:107:99:496,0,548	./.	0/0:15,0:13:2.91:0,3,34	0/1:14,0:13:18.88:19,0,33	0/1:88,9:72:81.33:105,0,81	1/1:87,4:74:6.18:173,6,0	0/0:35,0:23:11.67:0,12,122	0/1:13,0:12:23.09:23,0,134	0/1:11,0:8:21.28:21,0,25	0/1:24,2:17:54.92:175,0,55	0/1:30,2:29:49.32:170,0,49	0/1:161,9:152:99:478,0,434	0/0:11,0:9:3.01:0,3,36	0/0:9,0:7:0.47:0,0,1	0/0:24,0:22:3.01:0,3,36	0/1:64,5:61:99:123,0,157	0/1:127,5:96:86.61:563,0,87	0/0:17,0:14:9.25:0,9,146	0/1:14,0:14:32.85:42,0,33
chr10	54877412	.	GTGTC	G	1158.52	PASS	AB=0.992;AC=23;AF=0.411;AN=56;BaseQRankSum=2.510;DP=1564;FS=4.298;HRun=0;HaplotypeScore=266.7183;InbreedingCoeff=-0.5757;MQ=29.32;MQ0=133;MQRankSum=-0.843;QD=0.93;ReadPosRankSum=-7.472;VQSLOD=0.3416;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:20:56.41:56,0,89	0/1:10,0:9:32.07:32,0,152	0/1:30,0:2:13.97:14,0,63	0/0:38,0:2:6.02:0,6,96	0/1:58,1:47:41.73:42,0,147	0/0:49,0:47:6.02:0,6,197	0/1:150,0:110:99:103,0,646	0/1:111,0:47:76.41:76,0,899	0/0:82,1:63:4.59:0,5,258	0/1:135,0:102:99:267,0,1351	0/1:38,0:30:0:0,0,0	0/1:25,0:21:16.53:17,0,17	0/1:23,0:22:30.31:77,0,30	0/1:97,0:71:73.54:74,0,177	0/1:82,0:65:44.30:44,0,131	0/0:37,0:25:15.14:0,15,242	0/1:18,1:17:10.76:11,0,185	0/1:14,0:11:25.49:25,0,139	0/1:21,0:12:64.97:65,0,92	0/1:38,0:33:35.08:77,0,35	0/1:165,1:144:82.94:83,0,723	0/1:29,0:24:18.64:19,0,57	1/1:19,0:16:2.04:6,2,0	0/0:33,0:31:5.94:0,6,43	0/0:75,1:68:15.93:0,16,408	0/1:124,2:83:99:127,0,1272	0/1:20,0:18:51.86:52,0,70	0/1:11,1:11:41.68:42,0,95
chr10	54877414	.	GTC	G	2554.11	PASS	AB=0.956;AC=27;AF=0.500;AN=54;BaseQRankSum=1.567;DP=1536;FS=4.036;HRun=0;HaplotypeScore=240.9448;InbreedingCoeff=-0.7224;MQ=29.34;MQ0=131;MQRankSum=-0.015;QD=1.79;ReadPosRankSum=-5.111;VQSLOD=1.4816;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:22,1:20:51.62:52,0,55	0/1:10,0:9:17.49:17,0,106	0/1:29,0:2:13.97:14,0,30	0/0:39,0:2:1.74:0,2,50	0/1:54,4:45:42.20:42,0,76	0/1:45,2:45:27.73:28,0,117	0/1:137,7:108:99:263,0,451	0/1:103,4:44:99:186,0,649	0/1:74,7:61:80.22:80,0,118	0/1:122,8:98:99:410,0,861	./.	1/1:25,1:22:3.52:40,4,0	0/1:20,3:23:3.59:178,0,4	0/1:92,4:70:73.85:74,0,156	0/1:73,5:62:64.10:64,0,80	0/0:37,0:25:15.10:0,15,166	0/1:18,2:18:99:157,0,109	0/1:9,2:10:77.55:78,0,101	0/1:21,0:12:12.55:107,0,13	0/1:35,1:31:22.47:122,0,22	0/1:159,1:140:99:249,0,288	0/1:29,0:24:38.06:38,0,48	1/1:18,2:17:2.99:24,3,0	0/1:31,3:34:7.39:7,0,19	0/1:73,1:66:8.46:8,0,297	0/1:119,4:81:99:316,0,723	0/1:20,1:18:9.17:112,0,9	0/1:12,0:11:25.62:34,0,26
chr10	54877416	.	CTG	C	827.89	PASS	AB=0.941;AC=19;AF=0.352;AN=54;BaseQRankSum=-0.099;DP=1537;FS=7.915;HRun=0;HaplotypeScore=246.0090;InbreedingCoeff=-0.4267;MQ=29.28;MQ0=133;MQRankSum=1.756;QD=0.80;ReadPosRankSum=1.216;VQSLOD=1.4792;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:22:1.84:0,2,56	0/1:10,0:9:15.68:16,0,89	0/0:32,0:3:2.94:0,3,18	0/0:38,0:2:5.91:0,6,56	0/0:49,0:42:8.80:0,9,76	0/1:45,0:44:8.78:9,0,87	0/1:135,1:107:17.79:18,0,376	0/1:105,2:41:45.88:46,0,534	0/1:77,3:62:66.28:83,0,66	0/1:123,3:96:12.66:13,0,680	./.	1/1:22,5:23:2.84:37,3,0	0/1:23,3:26:16.15:74,0,16	0/0:94,2:73:8.83:0,9,145	0/0:74,0:61:5.69:0,6,71	0/0:33,1:24:11.66:0,12,129	0/1:19,2:18:72.29:101,0,72	0/1:13,0:10:14.66:15,0,80	0/1:16,2:12:55.18:55,0,87	0/1:28,1:28:24.96:25,0,25	0/1:111,33:138:99:313,0,306	0/0:29,1:24:0.99:0,1,46	0/1:18,1:17:0:0,0,0	0/1:31,7:38:14.73:31,0,15	0/0:70,1:67:19.27:0,19,265	0/1:114,1:77:31.23:31,0,629	0/1:18,3:18:13.63:98,0,14	0/1:12,0:11:7.02:7,0,31
chr10	54877436	.	GTC	G	1055.16	PASS	AB=0.957;AC=17;AF=0.304;AN=56;BaseQRankSum=3.993;DP=1522;FS=28.805;HRun=0;HaplotypeScore=245.7557;InbreedingCoeff=-0.1898;MQ=28.27;MQ0=137;MQRankSum=-2.065;QD=1.26;ReadPosRankSum=-0.537;VQSLOD=1.1244;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:38:19.62:0,20,305	0/0:8,0:8:9:0,9,93	0/0:44,0:8:3.64:0,4,101	0/0:48,0:7:13.04:0,13,168	0/1:43,0:36:17.80:18,0,90	0/1:46,2:47:47.66:48,0,66	0/1:119,3:89:87.52:88,0,280	0/0:93,0:38:10.10:0,10,534	0/1:68,6:55:36.72:142,0,37	0/1:93,5:70:99:303,0,493	1/1:38,2:28:2.55:17,3,0	0/1:37,0:32:3.24:3,0,209	0/1:34,1:33:20.60:21,0,163	0/0:68,7:55:5.41:0,5,49	0/1:69,2:57:5.04:16,0,5	0/1:26,3:19:13.18:41,0,13	0/0:30,0:28:20.86:0,21,310	0/0:17,0:13:14.43:0,14,68	0/0:28,0:15:22.12:0,22,459	0/1:29,0:25:0.08:0,0,237	0/0:168,0:141:64.55:0,65,1090	0/0:44,0:39:12.04:0,12,188	0/0:29,0:22:2.76:0,3,47	0/0:48,0:46:6:0,6,82	0/1:56,1:54:81.51:82,0,113	0/1:116,2:73:99:356,0,431	0/1:21,2:20:36.36:36,0,339	1/1:8,0:7:0.88:33,1,0
chr10	54877440	.	CTG	C	1957.04	PASS	AB=0.860;AC=22;AF=0.393;AN=56;BaseQRankSum=2.246;DP=1567;FS=24.478;HRun=0;HaplotypeScore=243.1764;InbreedingCoeff=0.0608;MQ=28.67;MQ0=146;MQRankSum=-2.456;QD=2.10;ReadPosRankSum=-0.580;VQSLOD=1.0024;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:40:4.76:0,5,293	0/0:7,2:8:3.01:0,3,49	0/0:41,0:7:12.29:0,12,152	0/0:46,0:7:14.88:0,15,171	0/1:37,5:37:39.87:51,0,40	1/1:36,15:52:11.11:131,11,0	0/1:96,20:85:99:151,0,209	0/1:85,8:37:99:129,0,303	1/1:55,17:57:13.28:182,13,0	0/1:94,10:70:99:268,0,314	1/1:32,7:29:2.64:37,3,0	0/0:31,0:32:3.33:0,3,216	0/1:30,0:33:8.55:9,0,279	0/0:52,24:57:3.43:0,3,24	1/1:46,22:59:6.49:72,6,0	1/1:18,11:20:12.01:124,12,0	0/1:21,0:28:91.32:91,0,254	0/1:10,0:12:39.89:66,0,40	0/0:29,0:14:13.29:0,13,448	0/0:32,1:29:27:0,27,355	0/0:177,2:153:80.84:0,81,1153	0/0:42,0:40:11.78:0,12,159	0/0:30,0:25:2.76:0,3,49	0/0:38,0:48:6.01:0,6,96	0/1:50,4:52:64.74:97,0,65	0/1:96,24:77:99:677,0,332	0/1:24,0:20:13.22:13,0,348	1/1:8,0:7:5.79:30,6,0
chr10	54877472	.	GTC	G	543.55	PASS	AB=0.960;AC=15;AF=0.268;AN=56;BaseQRankSum=2.354;DP=1865;FS=2.754;HRun=0;HaplotypeScore=350.9249;InbreedingCoeff=-0.1799;MQ=29.91;MQ0=159;MQRankSum=-1.221;QD=0.76;ReadPosRankSum=2.072;VQSLOD=1.6534;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:64,6:55:57.10:57,0,131	0/0:5,0:4:3.14:0,3,25	0/1:37,0:4:1.32:1,0,74	0/1:56,0:7:20.04:20,0,106	0/0:47,0:38:6.02:0,6,99	0/0:67,0:63:21.17:0,21,337	0/0:161,0:120:54.52:0,55,1342	0/0:117,0:51:12.67:0,13,1410	0/0:86,1:76:34.08:0,34,615	0/0:145,0:97:99:0,142,2363	0/0:39,1:35:12.04:0,12,169	0/1:50,3:47:50.73:51,0,56	0/1:41,6:44:99:139,0,99	0/0:91,0:79:1.67:0,2,10	0/0:84,0:77:20.58:0,21,267	1/1:33,1:27:10.09:44,10,0	0/1:36,2:35:99:117,0,166	0/1:15,2:13:70.91:71,0,91	0/1:32,0:15:10.68:11,0,156	0/1:37,0:32:2.35:2,0,165	0/0:193,0:173:23.07:0,23,543	0/0:50,0:40:8.36:0,8,58	0/0:42,1:38:18.41:0,18,123	0/1:61,2:59:2.54:3,0,41	0/1:56,0:51:5.95:6,0,234	0/1:140,2:99:99:125,0,1898	0/1:27,0:22:44.34:44,0,182	0/0:10,0:9:20.39:0,20,215
chr10	54877476	.	CTG	C	1927.77	PASS	AB=0.820;AC=18;AF=0.321;AN=56;BaseQRankSum=1.229;DP=1940;FS=0.000;HRun=0;HaplotypeScore=364.9028;InbreedingCoeff=0.2809;MQ=30.19;MQ0=157;MQRankSum=-0.655;QD=2.45;ReadPosRankSum=2.841;VQSLOD=1.0523;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:45,15:54:14.96:161,15,0	1/1:6,0:5:2.66:19,3,0	0/0:41,0:4:3.01:0,3,48	0/0:56,0:7:6.02:0,6,91	0/0:49,0:44:9.01:0,9,105	0/0:62,0:67:3.09:0,3,287	0/0:134,1:123:43.78:0,44,1046	0/0:114,0:54:76.80:0,77,1170	0/0:79,0:80:51.90:0,52,649	0/0:147,2:113:35.30:0,35,1926	0/0:41,1:37:12:0,12,116	1/1:29,20:49:14.87:179,15,0	0/1:32,10:47:8.20:217,0,8	0/0:80,0:81:8.04:0,8,80	0/0:69,1:79:10.01:0,10,286	0/0:36,0:29:8.70:0,9,87	1/1:21,11:36:30.37:295,30,0	0/1:11,2:13:1.81:99,0,2	0/1:28,1:15:37.09:125,0,37	0/1:32,5:32:25.19:113,0,25	0/1:158,25:172:80.36:373,0,80	0/0:33,6:40:0:0,0,0	0/1:20,4:40:0:0,0,0	1/1:35,11:59:3.01:36,3,0	0/0:58,0:59:18.96:0,19,244	0/1:150,1:107:99:311,0,1578	0/1:20,7:23:65.13:164,0,65	0/0:11,0:11:23.98:0,24,224
chr10	54877492	.	G	GTC	3533.56	PASS	AB=0.933;AC=18;AF=0.321;AN=56;BaseQRankSum=-4.465;DP=1955;FS=0.877;HRun=0;HaplotypeScore=372.0158;InbreedingCoeff=-0.3297;MQ=30.07;MQ0=162;MQRankSum=1.111;QD=2.56;ReadPosRankSum=3.844;VQSLOD=1.2857;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:65,0:54:17.36:0,17,130	0/0:8,0:6:3.85:0,4,22	0/0:41,0:4:11.59:0,12,104	0/0:53,0:4:6.32:0,6,61	0/0:51,2:43:9.63:0,10,84	0/1:66,4:64:99:100,0,140	0/1:145,23:129:99:679,0,306	0/1:123,0:56:99:226,0,790	0/1:95,2:87:68.19:68,0,384	0/1:167,12:124:99:853,0,1240	1/1:47,2:38:8.61:92,9,0	0/0:54,0:48:26.73:0,27,172	0/0:52,0:46:56.91:0,57,354	0/0:92,5:83:3.76:0,4,24	0/1:86,7:83:52.07:52,0,204	0/1:23,12:30:1.49:252,0,1	0/1:33,0:27:7.19:7,0,198	0/1:16,0:13:42.75:43,0,110	0/1:27,1:13:60.71:61,0,97	0/1:30,2:28:79.39:92,0,79	0/1:159,21:159:99:169,0,232	0/0:48,0:38:2.98:0,3,23	0/0:39,0:34:2.74:0,3,12	0/0:63,0:58:5.96:0,6,44	0/1:70,5:66:1.82:2,0,212	0/1:149,13:113:99:611,0,1305	0/1:23,5:22:85.14:194,0,85	0/1:14,0:12:23.24:34,0,23
chr10	54877496	.	GTC	G	2691.68	PASS	AB=0.945;AC=20;AF=0.370;AN=54;BaseQRankSum=0.284;DP=1876;FS=1.337;HRun=0;HaplotypeScore=377.0909;InbreedingCoeff=-0.0489;MQ=31.49;MQ0=141;MQRankSum=-0.687;QD=2.57;ReadPosRankSum=0.042;VQSLOD=1.2804;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:53,1:46:20.42:90,0,20	1/1:6,2:6:5.67:60,6,0	0/0:38,0:5:2.79:0,3,99	0/0:48,0:5:5.63:0,6,56	0/0:49,5:44:10.89:0,11,123	0/1:61,6:61:13.05:13,0,341	0/0:163,10:134:3.08:0,3,919	0/0:114,0:61:99:0,127,1589	0/0:87,7:84:10.77:0,11,621	0/1:167,9:125:99:151,0,1838	0/0:48,3:41:6.70:0,7,27	0/1:48,1:45:36.69:75,0,37	0/1:48,2:44:65.93:180,0,66	0/0:96,2:85:7.69:0,8,94	0/1:90,3:84:18.34:18,0,447	0/1:26,7:29:5.51:6,0,176	0/1:30,1:26:20.11:161,0,20	0/1:14,0:13:33.55:83,0,34	1/1:24,3:13:11.26:197,11,0	1/1:23,8:28:13.50:214,13,0	1/1:138,34:153:31.98:770,32,0	0/0:37,1:30:2.68:0,3,11	./.	0/1:58,0:53:6.22:6,0,18	0/0:61,8:61:21.80:0,22,324	0/1:141,16:112:99:746,0,1629	0/1:23,3:22:11.24:86,0,11	0/0:13,2:13:13.66:0,14,130
chr10	54877512	.	GTC	G	160.96	PASS	AB=0.964;AC=10;AF=0.179;AN=56;BaseQRankSum=3.974;DP=1702;FS=9.243;HRun=0;HaplotypeScore=371.7581;InbreedingCoeff=-0.0068;MQ=32.51;MQ0=122;MQRankSum=-5.600;QD=0.46;ReadPosRankSum=3.733;VQSLOD=0.9922;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:49:11.68:0,12,169	0/0:9,0:7:9.02:0,9,165	0/0:36,0:7:1.93:0,2,45	0/0:39,0:4:2.50:0,3,40	0/0:55,0:47:12.25:0,12,150	0/0:55,0:53:9.69:0,10,234	0/0:156,0:124:52.72:0,53,1107	0/0:108,0:54:99:0,132,1684	0/1:84,1:80:1.55:2,0,618	0/0:149,1:110:26.23:0,26,1968	0/0:44,0:35:19.69:0,20,208	0/1:45,0:43:1.74:2,0,119	0/1:50,1:45:45.91:46,0,348	0/0:84,0:74:13.04:0,13,167	0/0:85,1:77:41.12:0,41,624	0/0:34,0:29:18.94:0,19,307	0/0:28,0:23:23.85:0,24,268	0/1:12,1:12:41.55:42,0,179	0/1:25,1:12:35.24:35,0,253	0/0:21,5:23:28.19:0,28,329	0/0:142,7:135:64.70:0,65,1454	0/0:30,0:26:0.47:0,0,1	1/1:31,0:28:3.43:19,3,0	0/1:56,0:51:2.48:2,0,19	0/0:64,2:58:18.01:0,18,268	0/0:127,0:99:40.84:0,41,1748	0/1:18,3:18:76.35:118,0,76	0/1:13,0:13:20.28:20,0,163
chr10	54877516	.	CTG	C	1346.12	PASS	AB=0.995;AC=25;AF=0.446;AN=56;BaseQRankSum=0.102;DP=1665;FS=17.127;HRun=0;HaplotypeScore=353.2854;InbreedingCoeff=-0.3725;MQ=32.45;MQ0=114;MQRankSum=-2.920;QD=1.09;ReadPosRankSum=2.401;VQSLOD=0.8552;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:53,0:47:40.48:60,0,40	0/0:10,0:8:11.74:0,12,160	0/1:37,0:6:14.12:14,0,25	0/1:40,0:3:0.65:1,0,44	0/0:56,0:47:5.48:0,5,97	0/1:53,1:51:7.15:7,0,153	0/1:148,0:116:99:185,0,532	0/0:110,0:52:50.91:0,51,990	0/1:90,0:81:95.88:96,0,382	0/1:143,1:104:99:301,0,1156	0/1:43,1:36:7.07:7,0,159	0/1:46,0:43:54.46:65,0,54	0/1:48,0:43:99:168,0,242	0/1:82,0:72:10.55:11,0,117	0/1:89,0:77:4.92:5,0,423	0/1:33,0:27:0.66:1,0,242	0/1:26,0:22:12.89:13,0,108	0/1:13,0:12:89.04:89,0,136	0/1:21,0:11:6.49:6,0,243	0/0:29,0:25:23.94:0,24,284	0/0:158,0:136:60.54:0,61,1262	1/1:30,0:26:2.95:23,3,0	1/1:26,1:24:3.48:38,3,0	1/1:53,0:49:2.99:23,3,0	0/0:65,0:56:12.02:0,12,196	0/1:122,0:92:99:212,0,930	0/1:19,0:16:44.56:45,0,133	0/1:14,0:13:99:131,0,119
chr10	54877530	.	GTA	G	3945.10	PASS	AB=0.832;AC=27;AF=0.482;AN=56;BaseQRankSum=0.213;DP=1309;FS=14.376;HRun=0;HaplotypeScore=270.6285;InbreedingCoeff=-0.5519;MQ=33.19;MQ0=79;MQRankSum=-4.961;QD=3.69;ReadPosRankSum=-2.489;VQSLOD=1.1172;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:23,16:34:12.91:124,0,13	0/0:10,0:7:4.74:0,5,72	0/1:32,0:6:10.83:11,0,53	0/1:38,0:4:3.83:4,0,18	0/0:41,5:41:5.46:0,5,49	0/1:31,9:38:36.91:37,0,48	0/1:70,28:74:99:415,0,202	0/1:69,0:33:99:125,0,434	0/1:51,16:66:99:247,0,176	0/1:94,21:86:99:809,0,413	0/1:24,7:26:31.13:31,0,83	0/1:26,12:36:22.16:121,0,22	0/1:23,16:34:90.12:378,0,90	0/1:46,17:61:34.84:35,0,51	0/1:61,7:59:61.98:62,0,169	0/1:27,2:25:27.63:28,0,111	0/1:11,6:15:40.74:72,0,41	0/1:6,4:10:53.63:193,0,54	0/1:14,0:10:67.74:68,0,117	0/1:24,0:21:2.60:3,0,115	0/0:116,2:105:32.33:0,32,602	1/1:14,9:19:2.98:46,3,0	1/1:12,7:17:5.91:37,6,0	1/1:29,16:42:3.01:46,3,0	0/0:45,6:47:11.90:0,12,102	0/1:71,18:68:99:704,0,318	0/1:14,1:12:45.26:105,0,45	0/1:6,7:12:48.87:245,0,49
chr10	54877542	.	G	GTC	657.47	PASS	AB=0.971;AC=14;AF=0.250;AN=56;BaseQRankSum=3.339;DP=1124;FS=14.857;HRun=0;HaplotypeScore=258.0459;InbreedingCoeff=-0.0959;MQ=32.40;MQ0=55;MQRankSum=-0.813;QD=1.10;ReadPosRankSum=1.078;VQSLOD=0.9049;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:30:10.22:0,10,119	0/0:7,0:6:8.60:0,9,109	0/0:36,0:8:15.49:0,15,127	0/0:41,0:5:6.84:0,7,44	1/1:39,2:33:3.47:29,3,0	0/0:29,1:28:8.51:0,9,49	0/1:84,1:66:33.96:34,0,326	0/0:56,1:28:30.51:0,31,446	0/1:57,2:56:53.01:53,0,160	0/1:98,4:74:99:187,0,980	0/1:24,1:20:11.97:24,0,12	0/0:35,0:34:17.66:0,18,177	0/0:31,0:30:31.25:0,31,373	1/1:54,2:49:6:55,6,0	0/1:59,1:50:76.85:77,0,91	0/0:22,0:18:11.65:0,12,123	0/0:14,0:11:8.86:0,9,59	0/0:9,0:9:4.94:0,5,231	0/1:21,0:14:74.74:75,0,214	0/0:18,1:16:15.05:0,15,213	0/0:112,2:95:68.50:0,69,893	0/0:22,0:19:2.94:0,3,43	0/1:9,0:9:12.97:13,0,13	0/0:38,0:36:3.01:0,3,43	0/1:44,2:42:19.65:20,0,35	0/1:70,7:57:99:202,0,645	0/1:12,0:11:42.15:42,0,68	0/0:12,0:11:4.94:0,5,95
chr10	54877544	.	C	CTG	1171.66	PASS	AB=0.911;AC=19;AF=0.339;AN=56;BaseQRankSum=2.318;DP=1117;FS=9.034;HRun=0;HaplotypeScore=256.2950;InbreedingCoeff=-0.1260;MQ=32.19;MQ0=52;MQRankSum=-1.038;QD=1.60;ReadPosRankSum=-2.452;VQSLOD=0.3624;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:27:5.40:5,0,84	0/0:8,0:7:5.70:0,6,73	0/1:37,0:8:8.48:8,0,61	0/0:45,0:5:0.88:0,1,2	1/1:34,4:33:3.01:46,3,0	0/0:27,3:30:0.91:0,1,2	0/1:67,4:65:22.15:22,0,176	0/1:51,1:26:30.34:30,0,263	0/1:54,2:52:50.96:51,0,163	0/1:93,7:73:99:260,0,617	1/1:19,4:20:3.01:49,3,0	0/0:33,0:35:13.17:0,13,153	0/0:28,1:31:24.07:0,24,276	1/1:49,8:50:5.68:98,6,0	0/1:46,13:49:19.57:201,0,20	0/1:15,7:18:9.35:9,0,64	0/0:13,0:11:5.29:0,5,50	0/0:9,0:9:17.79:0,18,196	0/1:19,2:14:99:171,0,126	0/0:16,1:14:15.05:0,15,182	0/0:102,8:97:59.68:0,60,707	0/0:18,0:19:5.92:0,6,56	0/1:10,0:9:0:0,0,0	0/0:36,0:36:3.01:0,3,37	0/1:34,4:40:16.81:43,0,17	0/1:65,4:57:99:218,0,435	0/1:9,5:12:35.50:108,0,36	0/0:10,0:9:5.97:0,6,57
chr10	54877556	.	GTGTC	G	281.35	PASS	AB=0.988;AC=13;AF=0.232;AN=56;BaseQRankSum=2.285;DP=992;FS=18.955;HRun=0;HaplotypeScore=230.7181;InbreedingCoeff=-0.0143;MQ=32.96;MQ0=43;MQRankSum=-1.441;QD=0.58;ReadPosRankSum=-4.138;VQSLOD=0.7525;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:26:9.01:0,9,138	0/0:9,0:8:5.60:0,6,161	0/0:46,0:12:20.68:0,21,220	0/1:55,0:8:0.80:1,0,25	1/1:33,0:27:2.94:45,3,0	0/1:19,1:20:0.17:0,0,0	0/1:66,0:49:54.79:55,0,375	0/1:32,0:15:11.10:11,0,638	0/1:46,0:42:17.77:18,0,289	0/1:82,1:58:99:112,0,1664	0/0:28,0:22:2.68:0,3,11	0/0:33,0:30:20.19:0,20,259	0/0:27,0:26:25.46:0,25,505	0/0:50,1:45:6.49:0,6,103	0/1:51,1:46:56.29:56,0,171	0/0:22,0:19:9.08:0,9,175	0/0:10,0:7:5.96:0,6,95	0/0:9,0:9:18.02:0,18,380	0/0:17,0:12:22.88:0,23,476	0/0:18,0:16:15.05:0,15,336	0/0:106,3:90:59.87:0,60,1393	0/0:21,0:20:5.97:0,6,99	1/1:10,0:9:2.80:13,3,0	0/0:29,0:29:3.01:0,3,81	0/0:39,0:36:5.96:0,6,77	0/1:69,0:54:84.24:84,0,1213	0/1:15,0:12:22.21:22,0,180	0/0:8,0:7:5.89:0,6,101
chr10	54877558	.	GTC	G	124.85	PASS	AB=0.971;AC=13;AF=0.232;AN=56;BaseQRankSum=3.964;DP=954;FS=9.940;HRun=0;HaplotypeScore=208.6513;InbreedingCoeff=-0.1137;MQ=33.88;MQ0=40;MQRankSum=-2.120;QD=0.32;ReadPosRankSum=-3.578;VQSLOD=0.6325;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,1:25:8.97:0,9,98	0/0:9,0:8:5.85:0,6,114	0/0:47,0:13:8.96:0,9,140	0/0:57,1:9:3.37:0,3,31	1/1:31,1:26:2.50:10,2,0	0/0:20,0:19:0.82:0,1,3	0/1:59,2:43:24.39:24,0,247	0/0:32,0:15:18.87:0,19,477	0/0:43,3:42:5.65:0,6,224	0/1:77,0:54:91.93:92,0,1178	0/0:26,1:22:2.97:0,3,22	0/1:28,2:28:10.29:10,0,126	0/1:27,0:26:11.80:12,0,333	0/0:45,3:42:6.49:0,6,64	0/1:48,3:45:18.26:18,0,135	0/0:20,0:17:7.90:0,8,126	0/1:9,0:6:12.73:13,0,34	0/1:8,1:9:15.05:15,0,247	0/0:16,0:11:4.39:0,4,273	0/0:17,0:15:15.01:0,15,247	0/0:101,3:87:59.87:0,60,1044	0/0:19,1:19:5.93:0,6,77	1/1:10,0:9:2.80:13,3,0	0/0:25,1:26:3.01:0,3,58	0/0:37,1:35:5.94:0,6,55	0/1:65,1:51:48.85:49,0,904	0/1:15,0:12:5.24:5,0,113	0/0:8,0:7:5.98:0,6,78
chr10	54877574	.	GTA	G	127.72	PASS	AB=0.920;AC=17;AF=0.386;AN=44;BaseQRankSum=1.500;DP=647;FS=8.638;HRun=0;HaplotypeScore=153.0684;InbreedingCoeff=0.1011;MQ=45.12;MQ0=30;MQRankSum=-2.952;QD=0.36;ReadPosRankSum=0.337;VQSLOD=1.8645;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:12,2:10:1.25:0,1,3	1/1:8,0:7:1.06:11,1,0	0/0:47,0:17:39.33:0,39,474	0/1:53,0:13:5.43:5,0,215	0/0:13,0:11:0:0,0,0	./.	0/1:44,2:33:9.74:10,0,16	1/1:15,0:9:5.63:42,6,0	1/1:32,0:31:6.05:43,6,0	0/1:42,0:34:23.68:24,0,78	./.	0/0:19,1:18:3.31:0,3,21	1/1:14,1:15:0.18:0,0,0	1/1:27,2:29:1.43:4,1,0	0/1:34,2:32:0.18:0,0,1	0/0:13,1:11:4.24:0,4,28	0/0:6,0:4:2.92:0,3,17	0/1:4,2:6:8.23:44,0,8	0/1:8,0:7:0.82:1,0,32	0/0:8,1:8:1:0,1,3	0/0:64,8:64:3.39:0,3,22	./.	./.	./.	0/0:24,3:25:0.41:0,0,1	0/1:45,2:38:55.41:55,0,67	0/0:13,0:10:7.64:0,8,39	./.
chr10	54877575	.	TATC	T	1178.63	PASS	AB=0.978;AC=16;AF=0.348;AN=46;BaseQRankSum=3.585;DP=604;FS=23.065;HRun=0;HaplotypeScore=146.7510;InbreedingCoeff=-0.0945;MQ=47.38;MQ0=27;MQRankSum=-2.991;QD=3.31;ReadPosRankSum=0.528;VQSLOD=1.3045;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:10:1.71:5,2,0	0/1:7,0:6:6.97:36,0,7	0/0:50,0:18:36.66:0,37,613	0/1:49,0:13:33.06:33,0,275	0/0:11,0:11:0:0,0,0	./.	0/1:42,3:30:10.64:57,0,11	0/1:13,0:7:4.07:104,0,4	1/1:29,2:29:10.09:170,10,0	0/1:37,2:30:80.71:325,0,81	./.	0/0:19,0:17:2.37:0,2,10	1/1:14,0:14:0.33:1,0,0	0/0:29,1:27:1.35:0,1,4	0/0:34,2:31:0.47:0,0,1	0/0:14,0:11:5.76:0,6,38	0/0:4,0:2:2.74:0,3,12	0/1:6,0:6:14.15:43,0,14	0/1:9,0:7:22.79:36,0,23	0/0:9,0:8:3.56:0,4,15	0/1:69,1:60:33.19:49,0,33	./.	./.	0/1:11,0:11:0:0,0,0	0/0:22,3:23:0.47:0,0,1	0/1:41,2:35:65.58:435,0,66	0/0:13,0:10:2.67:0,3,12	./.
chr10	54877622	.	GTGA	G	436.41	PASS	AB=0.961;AC=21;AF=0.618;AN=34;BaseQRankSum=1.606;DP=321;FS=11.734;HRun=0;HaplotypeScore=88.8333;InbreedingCoeff=0.2007;MQ=55.17;MQ0=4;MQRankSum=-1.073;QD=2.24;ReadPosRankSum=-1.679;VQSLOD=0.7854;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:8,1:7:1.45:3,1,0	./.	0/1:9,0:5:15.94:16,0,49	0/0:20,0:12:9.83:0,10,126	./.	0/1:8,1:9:0:0,0,0	1/1:20,1:17:4.19:31,4,0	1/1:7,1:7:2.04:27,2,0	0/0:19,4:23:2.25:0,2,9	0/1:24,0:16:3.71:77,0,4	./.	1/1:11,0:10:3.61:27,4,0	0/1:9,0:9:0.01:0,0,0	1/1:17,5:19:2.66:23,3,0	0/0:22,4:24:0:0,0,0	0/1:8,0:6:0.11:0,0,0	0/1:1,0:1:0:0,0,0	./.	1/1:2,0:2:2.97:20,3,0	./.	0/1:30,3:28:0.13:0,0,0	./.	./.	./.	./.	1/1:25,3:25:0.74:303,1,0	./.	./.
chr10	54877629	.	G	GTC	96.58	PASS	AB=0.977;AC=12;AF=0.375;AN=32;BaseQRankSum=1.500;DP=275;FS=5.195;HRun=0;HaplotypeScore=78.0259;InbreedingCoeff=0.0112;MQ=54.59;MQ0=4;MQRankSum=0.361;QD=0.67;ReadPosRankSum=1.454;VQSLOD=1.1690;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:7,0:6:0.02:0,0,0	./.	0/1:6,0:5:8.69:9,0,40	0/0:14,0:8:7.26:0,7,84	./.	./.	0/0:19,1:17:2.74:0,3,12	0/1:6,0:6:1.90:2,0,45	0/0:18,0:18:2.05:0,2,15	0/1:21,1:15:69.66:70,0,114	./.	0/0:7,0:7:2.90:0,3,16	0/1:8,0:8:0:0,0,0	0/0:17,0:14:2.92:0,3,17	0/1:20,0:18:0:0,0,0	1/1:8,0:6:0.89:2,1,0	./.	./.	0/0:1,0:1:2.92:0,3,17	./.	0/1:30,0:26:0:1,0,0	./.	./.	./.	1/1:10,1:10:0.47:1,0,0	0/1:22,3:22:94.52:95,0,214	./.	./.
chr10	54878754	.	T	TAA	11850.59	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-2.317;DP=588;FS=0.000;HRun=9;HaplotypeScore=86.7569;InbreedingCoeff=0.8983;MQ=73.83;MQ0=2;MQRankSum=-3.205;QD=22.83;ReadPosRankSum=3.360;VQSLOD=4.1454;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,0:31:67.37:231,67,0	0/0:10,0:10:27.06:0,27,287	0/0:18,0:16:31.99:0,32,282	0/0:18,0:17:4.04:0,4,227	1/1:3,33:37:95.72:1380,96,0	1/1:1,22:24:60.20:906,60,0	1/1:4,17:23:51.12:742,51,0	1/1:8,12:22:41.59:563,42,0	1/1:3,21:24:56.80:877,57,0	1/1:2,19:21:54.18:830,54,0	1/1:5,20:27:57.14:819,57,0	1/1:1,0:11:22.46:77,22,0	1/1:0,0:16:39.93:137,40,0	1/1:0,14:14:33.11:508,33,0	1/1:5,18:21:51.17:774,51,0	0/0:23,0:23:63.15:0,63,670	1/1:3,1:30:2.59:179,3,0	1/1:1,0:23:49.91:171,50,0	1/1:5,0:24:47.71:167,48,0	1/1:4,1:24:47.81:200,48,0	1/1:0,0:6:12.48:43,12,0	1/1:1,1:18:35.92:169,36,0	1/1:1,0:17:32.32:111,32,0	1/1:1,0:11:22.46:77,22,0	1/1:1,22:23:66.22:1016,66,0	1/1:1,20:22:59.99:889,60,0	1/1:3,0:25:44.67:154,45,0	1/1:4,18:22:54.18:831,54,0
chr10	54878975	.	C	CTCTATCTATCTATCTATCTA	19660.78	PASS	AB=1.000;AC=53;AF=0.946;AN=56;BaseQRankSum=0.115;DP=676;FS=2.629;HRun=0;HaplotypeScore=360.7883;InbreedingCoeff=0.2923;MQ=61.03;MQ0=2;MQRankSum=0.640;QD=30.43;ReadPosRankSum=3.502;VQSLOD=2.4571;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:34,0:34:17.91:541,18,0	1/1:8,0:8:6.02:126,6,0	0/0:30,0:25:17.20:0,17,341	0/1:24,0:17:8.86:9,0,82	1/1:37,0:36:16.11:503,16,0	1/1:35,0:35:17.89:820,18,0	1/1:14,0:14:8.98:142,9,0	1/1:38,0:31:33.10:976,33,0	1/1:36,0:36:27.09:1233,27,0	1/1:31,0:31:45.15:2459,45,0	1/1:23,0:23:9.03:572,9,0	1/1:22,0:22:6:164,6,0	1/1:27,0:27:30.10:1877,30,0	1/1:14,0:14:12.04:687,12,0	1/1:26,0:26:12.04:734,12,0	1/1:25,0:25:27.09:1538,27,0	1/1:12,0:12:2.98:22,3,0	1/1:14,0:14:15.05:799,15,0	1/1:24,0:24:23.44:1118,23,0	1/1:15,1:23:3.01:278,3,0	1/1:7,0:7:3.01:118,3,0	1/1:28,0:28:24.06:996,24,0	1/1:25,0:25:13.84:770,14,0	1/1:13,0:13:1.68:69,2,0	1/1:24,0:24:12.04:458,12,0	1/1:36,0:36:42.13:2215,42,0	1/1:19,2:35:3.01:279,3,0	1/1:11,0:11:6.02:158,6,0
chr10	54881637	.	A	AT	9936.36	PASS	AB=0.542;AC=23;AF=0.411;AN=56;BaseQRankSum=-11.124;DP=594;FS=8.376;HRun=1;HaplotypeScore=59.2933;InbreedingCoeff=0.9262;MQ=87.94;MQ0=0;MQRankSum=-2.864;QD=39.75;ReadPosRankSum=1.031;VQSLOD=5.1831;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,102,1320	0/0:15,0:15:39.13:0,39,505	0/0:22,0:22:62.91:0,63,789	0/0:23,0:23:56.36:0,56,745	1/1:0,30:30:84.20:1208,84,0	1/1:0,13:13:33.11:494,33,0	1/1:0,19:19:48.16:720,48,0	1/1:0,16:16:48.15:695,48,0	1/1:1,21:22:57.19:854,57,0	1/1:0,21:21:63.19:895,63,0	1/1:0,16:16:45.11:649,45,0	0/0:25,0:25:72.23:0,72,933	0/0:18,0:18:51.17:0,51,662	1/1:0,17:17:48.16:720,48,0	1/1:0,21:21:60.20:899,60,0	0/0:17,0:17:51.17:0,51,662	0/0:26,0:26:78.23:0,78,996	0/0:17,0:17:48.13:0,48,607	0/0:22,0:22:66.17:0,66,836	0/0:22,0:22:57.19:0,57,739	0/0:23,0:23:66.21:0,66,857	0/0:15,0:15:45.15:0,45,584	0/0:19,0:19:57.19:0,57,738	0/0:21,0:21:60.19:0,60,778	1/1:0,20:20:54.18:809,54,0	1/1:1,22:23:66.19:960,66,0	0/0:24,0:24:72.23:0,72,935	0/1:5,27:32:99:1034,0,104
chr10	54883308	.	GCACA	G	2236.01	PASS	AB=0.790;AC=26;AF=0.481;AN=54;BaseQRankSum=7.551;DP=597;FS=3.897;HRun=0;HaplotypeScore=107.4464;InbreedingCoeff=0.7141;MQ=64.92;MQ0=7;MQRankSum=-0.243;QD=9.02;ReadPosRankSum=0.670;VQSLOD=2.4664;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:48:53.65:0,54,1045	1/1:7,0:7:12.01:112,12,0	./.	0/0:36,0:28:0:0,0,0	1/1:17,2:19:2.22:7,2,0	0/1:17,2:19:6.75:41,0,7	0/1:14,9:27:27.17:222,0,27	1/1:19,0:19:3:27,3,0	1/1:13,1:16:2.43:94,2,0	1/1:13,6:18:16.11:191,16,0	1/1:11,5:15:11.90:174,12,0	0/0:17,0:16:15.03:0,15,260	0/0:17,0:17:27.05:0,27,530	1/1:9,11:21:27.09:423,27,0	1/1:13,11:26:27.30:385,27,0	1/1:11,0:11:15.02:140,15,0	0/0:32,0:32:47.59:0,48,872	0/0:23,0:23:43.03:0,43,963	0/0:12,0:12:15.04:0,15,277	0/0:7,0:8:9.03:0,9,166	0/0:39,0:40:33.29:0,33,713	0/0:14,0:14:18.52:0,19,351	0/0:10,0:12:8.77:0,9,144	0/0:44,0:53:86.20:0,86,1662	1/1:12,3:15:9.03:141,9,0	1/1:10,4:14:12.02:150,12,0	0/0:14,0:14:20.99:0,21,327	1/1:10,7:17:21.07:328,21,0
chr10	54883335	.	CACACACACA	C	468.68	PASS	AB=0.749;AC=2;AF=0.036;AN=56;BaseQRankSum=5.409;DP=739;FS=2.675;HRun=0;HaplotypeScore=188.2817;InbreedingCoeff=-0.0347;MQ=52.23;MQ0=31;MQRankSum=-4.746;QD=19.53;ReadPosRankSum=3.893;VQSLOD=3.1072;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:53:99:0,132,4194	0/1:9,4:13:74.84:247,0,75	0/0:47,0:12:36.12:0,36,453	0/0:50,0:14:36.12:0,36,464	0/0:16,0:16:29.69:0,30,535	0/0:20,0:21:45.11:0,45,797	0/0:33,0:33:69.17:0,69,1185	0/0:33,0:33:96.30:0,96,1523	0/0:19,0:19:24.36:0,24,799	0/0:28,0:26:78.21:0,78,1403	0/0:17,0:16:36.31:0,36,527	0/0:18,0:17:51.17:0,51,1522	0/0:16,0:16:48.16:0,48,1657	0/0:25,0:25:64.10:0,64,1100	0/0:23,0:23:50.75:0,51,785	0/1:7,4:11:26.22:310,0,26	0/0:39,0:38:99:0,107,3258	0/0:32,0:32:87.26:0,87,2740	0/0:13,0:13:35.71:0,36,914	0/0:16,0:16:41.88:0,42,1198	0/0:56,0:54:99:0,126,3838	0/0:17,0:17:45.62:0,46,1335	0/0:18,0:18:43.02:0,43,943	0/0:59,0:59:99:0,147,5219	0/0:16,0:16:48.14:0,48,722	0/0:18,0:16:47.74:0,48,941	0/0:17,0:17:51.17:0,51,1540	0/0:13,0:13:39.13:0,39,663
chr10	54885546	.	CAT	C	3106.83	PASS	AB=0.994;AC=39;AF=0.722;AN=54;BaseQRankSum=3.152;DP=475;FS=7.207;HRun=0;HaplotypeScore=107.9599;InbreedingCoeff=0.1442;MQ=66.23;MQ0=3;MQRankSum=0.578;QD=7.60;ReadPosRankSum=1.649;VQSLOD=2.5339;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:44,0:43:29.24:409,29,0	1/1:1,1:2:3.01:36,3,0	./.	0/0:19,0:7:2.68:0,3,11	0/1:16,0:16:2.76:52,0,3	0/1:17,0:17:6.04:47,0,6	1/1:7,0:7:2.91:68,3,0	1/1:38,1:39:53.47:374,53,0	0/0:10,0:10:2.97:0,3,9	1/1:23,0:23:30.69:236,31,0	0/0:13,0:13:4.72:0,5,14	1/1:17,0:17:38.69:270,39,0	1/1:24,0:24:41.66:290,42,0	0/1:15,0:15:10.11:27,0,10	0/0:8,0:8:0.47:0,0,2	1/1:6,0:6:1.55:4,2,0	1/1:23,0:23:19.61:242,20,0	1/1:26,0:26:50.61:357,51,0	1/1:19,1:20:30.41:243,30,0	1/1:12,0:12:4.96:15,5,0	1/1:5,0:5:2.04:6,2,0	0/1:16,0:16:10.76:50,0,11	0/1:12,0:12:2.13:95,0,2	1/1:14,0:14:20.86:149,21,0	1/1:21,0:21:0.12:49,0,0	1/1:18,0:18:21.46:116,21,0	0/1:11,0:11:26.91:27,0,127	0/1:20,1:21:6.65:76,0,7
chr10	54885559	.	A	ATATG	943.31	PASS	AB=1.000;AC=18;AF=0.321;AN=56;BaseQRankSum=-8.129;DP=466;FS=8.052;HRun=0;HaplotypeScore=134.3592;InbreedingCoeff=0.1918;MQ=66.13;MQ0=5;MQRankSum=0.436;QD=5.13;ReadPosRankSum=-4.603;VQSLOD=0.0828;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:37:62.93:0,63,554	1/1:2,0:2:3.01:36,3,0	0/0:21,0:6:0.47:0,0,1	0/0:29,0:9:7.68:0,8,36	0/1:18,0:18:9.30:9,0,113	0/1:17,0:17:0.64:1,0,77	0/1:7,0:7:7.04:7,0,20	0/1:39,0:39:85.50:144,0,85	0/0:9,0:9:20.89:0,21,70	0/1:22,0:22:39.73:98,0,40	0/0:12,0:12:24.16:0,24,91	0/0:21,0:21:38.95:0,39,335	0/0:20,0:20:41.41:0,41,344	0/1:9,0:9:13.68:14,0,50	0/0:6,0:6:6.36:0,6,21	1/1:1,6:7:2.97:81,3,0	0/0:21,0:21:38.95:0,39,342	0/0:28,0:28:51.05:0,51,471	1/1:21,0:21:7.99:389,8,0	1/1:11,0:11:0.61:132,1,0	1/1:5,0:5:3.01:37,3,0	0/0:11,0:11:11.56:0,12,106	0/0:14,0:14:20.51:0,21,195	0/0:11,0:11:20.99:0,21,189	0/0:19,0:19:28.01:0,28,123	0/1:15,0:15:35.62:36,0,47	0/1:11,0:11:99:115,0,104	0/0:22,0:22:29.31:0,29,178
chr10	54885561	.	A	ATG	1928.64	PASS	AB=0.950;AC=33;AF=0.589;AN=56;BaseQRankSum=-12.060;DP=473;FS=47.812;HRun=0;HaplotypeScore=117.6226;InbreedingCoeff=0.4846;MQ=65.06;MQ0=5;MQRankSum=0.109;QD=6.74;ReadPosRankSum=-5.117;VQSLOD=0.3778;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:37:30.34:0,30,130	1/1:2,0:2:3.01:36,3,0	0/0:22,0:5:0:0,0,0	0/1:29,0:9:9.06:9,0,11	0/1:17,0:18:7.98:49,0,8	1/1:17,0:17:10.49:55,10,0	1/1:7,0:7:9.59:35,10,0	1/1:41,0:41:57.03:324,57,0	1/1:10,0:10:13.07:33,13,0	1/1:21,0:21:34.27:191,34,0	1/1:12,0:12:9.01:24,9,0	0/0:22,0:22:20.35:0,20,64	0/0:20,0:20:4.93:0,5,46	1/1:10,0:10:3.21:44,3,0	1/1:5,0:5:5.24:14,5,0	0/1:7,0:7:18.95:26,0,19	0/0:21,0:22:23.74:0,24,82	0/0:28,0:28:36.08:0,36,113	1/1:4,17:21:28.53:593,29,0	1/1:1,11:12:10.08:216,10,0	1/1:0,5:5:3.01:58,3,0	0/0:11,0:11:9.57:0,10,46	0/0:13,0:14:17.17:0,17,80	0/0:10,0:10:12.74:0,13,40	1/1:19,0:19:15.84:59,16,0	1/1:16,0:16:24.16:108,24,0	0/1:8,4:12:43.97:204,0,44	0/1:22,0:22:8.84:39,0,9
chr10	54886879	.	CTT	C	3227.04	PASS	AB=0.607;AC=17;AF=0.304;AN=56;BaseQRankSum=-7.039;DP=569;FS=3.116;HRun=15;HaplotypeScore=95.9235;InbreedingCoeff=0.9018;MQ=79.66;MQ0=1;MQRankSum=-0.008;QD=16.63;ReadPosRankSum=6.613;VQSLOD=3.0270;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,28:33:74.90:661,75,0	0/0:0,0:6:9.02:0,9,102	0/0:36,0:23:20.43:0,20,282	0/0:23,0:18:16.86:0,17,120	0/0:6,0:20:48.06:0,48,497	0/0:7,0:18:36.04:0,36,371	0/0:6,0:25:35.55:0,36,345	0/0:16,0:31:52.83:0,53,513	0/0:8,0:22:33.07:0,33,359	0/0:9,0:22:48:0,48,477	0/0:2,0:10:23.95:0,24,220	1/1:7,23:32:62.28:526,62,0	1/1:2,10:14:38.45:314,38,0	0/0:9,0:14:24.01:0,24,253	0/0:7,0:19:27.05:0,27,281	0/0:5,0:24:39.05:0,39,381	1/1:3,29:35:74.23:668,74,0	1/1:2,17:19:46.46:420,46,0	0/0:6,0:19:32.80:0,33,126	0/0:6,0:15:21.39:0,21,106	0/1:6,1:17:2.93:3,0,77	1/1:4,11:15:29.20:238,29,0	1/1:2,11:13:32.96:291,33,0	1/1:4,11:16:38.50:312,38,0	0/0:5,0:17:27.04:0,27,268	0/0:12,0:29:75.55:0,76,760	0/0:4,1:19:4.02:0,4,69	0/0:2,0:5:12.03:0,12,130
chr10	54887614	.	AATAT	A	14102.45	PASS	AB=0.804;AC=46;AF=0.821;AN=56;BaseQRankSum=-8.551;DP=495;FS=7.739;HRun=0;HaplotypeScore=98.8977;InbreedingCoeff=0.6767;MQ=67.93;MQ0=3;MQRankSum=-0.866;QD=31.20;ReadPosRankSum=1.700;VQSLOD=4.4497;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,33:45:87.30:1484,87,0	1/1:2,4:6:3.01:51,3,0	0/1:10,0:10:6.05:6,0,12	0/0:8,0:7:5.04:0,5,33	1/1:5,17:22:33.08:549,33,0	1/1:5,13:18:36.12:614,36,0	1/1:5,9:14:12.04:205,12,0	1/1:10,18:28:54.15:855,54,0	1/1:2,10:12:24.08:409,24,0	1/1:4,26:32:74.52:1377,75,0	1/1:4,9:13:27.09:461,27,0	1/1:7,15:22:42.14:716,42,0	1/1:7,14:21:39.13:629,39,0	1/1:3,15:17:39.13:665,39,0	1/1:0,11:11:30.10:512,30,0	1/1:1,14:15:39.13:665,39,0	1/1:2,26:28:60.21:1023,60,0	1/1:7,11:18:27.09:447,27,0	0/0:3,0:12:31.24:0,31,190	0/1:5,1:14:31.39:31,0,55	0/0:1,1:4:5.60:0,6,25	1/1:3,12:15:21.07:343,21,0	1/1:4,15:19:39.13:650,39,0	1/1:6,11:17:27.09:459,27,0	1/1:4,18:22:54.18:921,54,0	1/1:7,17:25:41.39:823,41,0	0/0:2,0:17:42.15:0,42,196	1/1:1,6:7:12.04:205,12,0
chr10	54888133	.	G	GCA	3896.31	PASS	AB=0.840;AC=28;AF=0.500;AN=56;BaseQRankSum=3.580;DP=554;FS=15.665;HRun=0;HaplotypeScore=131.0416;InbreedingCoeff=0.7355;MQ=51.51;MQ0=16;MQRankSum=2.566;QD=11.63;ReadPosRankSum=2.319;VQSLOD=2.3164;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:44,3:48:47.42:604,47,0	1/1:5,3:8:8.93:212,9,0	1/1:28,0:8:1.55:4,2,0	0/0:26,0:8:5.78:0,6,42	0/0:16,0:15:8.67:0,9,108	0/0:13,0:14:20.88:0,21,219	0/0:27,0:27:35.89:0,36,411	0/0:21,0:19:35.41:0,35,338	0/0:13,0:13:21.06:0,21,252	0/0:17,0:18:32.89:0,33,357	0/0:7,0:8:3.01:0,3,36	1/1:14,0:17:4.80:125,5,0	1/1:13,0:13:16.20:150,16,0	0/0:21,0:21:26.87:0,27,274	0/0:17,0:16:30.06:0,30,337	1/1:15,7:22:33.07:458,33,0	1/1:32,0:33:50.78:410,51,0	1/1:27,1:28:29.17:316,29,0	1/1:12,2:10:17.96:214,18,0	0/1:17,5:22:6.40:362,0,6	0/1:27,5:32:18.32:186,0,18	1/1:11,0:12:20.83:185,21,0	1/1:10,1:14:5.45:25,5,0	1/1:27,1:31:56.45:469,56,0	0/0:14,0:15:9.03:0,9,108	0/0:18,0:18:36.04:0,36,413	1/1:5,5:10:15.01:175,15,0	0/0:3,0:3:9.01:0,9,94
chr10	54888150	.	CAGAT	C	2472.83	PASS	AB=1.000;AC=27;AF=0.482;AN=56;BaseQRankSum=6.422;DP=565;FS=2.098;HRun=0;HaplotypeScore=156.3794;InbreedingCoeff=0.1136;MQ=47.49;MQ0=14;MQRankSum=2.640;QD=6.18;ReadPosRankSum=1.003;VQSLOD=2.6647;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:49,0:48:25.51:451,26,0	1/1:7,1:8:2.91:80,3,0	0/0:18,0:1:3.01:0,3,32	0/0:27,0:5:5.85:0,6,88	0/0:14,0:13:8.40:0,8,129	0/0:15,0:15:20.79:0,21,278	0/0:30,0:30:23.47:0,23,528	0/1:29,0:27:3.32:3,0,740	0/0:16,0:16:18.11:0,18,223	0/1:19,0:19:80.84:81,0,486	0/0:12,0:12:3.01:0,3,50	1/1:18,0:19:16.32:162,16,0	1/1:9,1:11:4.49:224,4,0	0/1:21,0:20:34.33:34,0,249	0/0:16,0:15:28.62:0,29,321	0/1:21,0:21:9.49:32,0,9	1/1:28,2:28:30.92:430,31,0	1/1:24,3:28:5.95:276,6,0	0/1:13,0:11:28.20:53,0,28	0/1:23,0:23:41.20:61,0,41	0/1:35,0:33:38.81:39,0,39	0/1:14,0:13:32.42:97,0,32	1/1:14,0:14:3.55:12,4,0	1/1:32,0:32:59.76:454,60,0	0/0:17,0:17:8.83:0,9,131	0/1:21,0:21:51.69:52,0,304	0/1:9,0:9:1.36:92,0,1	0/1:4,0:4:15.76:16,0,44
chr10	54888154	.	TACACACACACAC	T	2566.12	PASS	AB=1.000;AC=24;AF=0.462;AN=52;BaseQRankSum=-4.470;DP=568;FS=0.670;HRun=0;HaplotypeScore=208.4631;InbreedingCoeff=0.5183;MQ=48.57;MQ0=15;MQRankSum=-2.512;QD=9.50;ReadPosRankSum=-2.608;VQSLOD=1.6059;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:42:72.25:0,72,2091	0/0:8,0:8:6.02:0,6,140	0/0:19,0:2:3.01:0,3,47	0/0:34,0:4:3.01:0,3,42	1/1:6,8:14:1.77:4,2,0	./.	1/1:14,17:31:3.48:105,3,0	1/1:19,13:30:27.08:425,27,0	1/1:6,9:15:6.02:209,6,0	1/1:12,6:18:18.06:446,18,0	./.	0/0:17,0:19:21.22:0,21,708	0/0:11,0:11:24.04:0,24,551	1/1:6,12:19:12:280,12,0	1/1:8,6:13:9.03:297,9,0	0/0:23,0:23:13.74:0,14,279	0/0:27,0:26:39.98:0,40,1073	0/0:27,0:28:51.52:0,52,1295	0/1:14,0:12:10.90:11,0,128	0/1:22,0:22:15.76:18,0,16	0/1:39,0:34:4.58:5,0,179	0/0:12,0:12:21.07:0,21,714	0/0:11,0:13:14.95:0,15,317	0/0:30,0:32:54.17:0,54,1422	1/1:6,10:16:0.94:2,1,0	1/1:8,12:20:30.13:700,30,0	0/1:10,0:10:38.62:39,0,85	1/1:3,1:4:6.02:203,6,0
chr10	54888182	.	CACACACACAT	C	1504.39	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=4.749;DP=570;FS=0.597;HRun=0;HaplotypeScore=184.2278;InbreedingCoeff=0.2734;MQ=61.40;MQ0=21;MQRankSum=-3.598;QD=8.50;ReadPosRankSum=1.499;VQSLOD=2.1392;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:43:96.15:0,96,2167	0/0:7,0:7:5.50:0,6,45	0/0:41,0:14:22.08:0,22,365	0/0:55,0:20:20.48:0,20,520	0/0:17,0:17:19.35:0,19,174	0/0:8,0:8:8.92:0,9,66	0/1:26,0:26:18.59:19,0,242	0/0:23,0:23:46.77:0,47,389	0/1:15,0:15:81.14:81,0,99	0/1:10,0:10:89.84:90,0,97	0/0:15,0:15:20.90:0,21,166	0/0:21,0:21:35.75:0,36,758	0/0:14,0:14:31.41:0,31,532	0/1:17,0:17:44.03:106,0,44	0/1:8,0:8:49.92:117,0,50	0/0:20,0:20:10.38:0,10,109	0/0:28,0:27:57.41:0,57,1027	0/0:31,0:30:71.77:0,72,1300	1/1:2,12:14:34.22:457,34,0	1/1:1,12:13:3.01:85,3,0	1/1:9,26:30:9.01:153,9,0	0/0:13,0:12:26.61:0,27,588	0/0:15,0:15:23.79:0,24,445	0/0:29,0:29:66.05:0,66,1192	0/0:12,0:12:11.43:0,11,84	0/1:19,0:19:99:184,0,246	1/1:1,11:12:14.67:297,15,0	0/1:8,0:8:86.10:86,0,94
chr10	54888188	.	CACAT	C	1087.26	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=6.255;DP=557;FS=0.000;HRun=0;HaplotypeScore=141.6305;InbreedingCoeff=0.2226;MQ=67.08;MQ0=19;MQRankSum=-2.050;QD=4.15;ReadPosRankSum=8.003;VQSLOD=1.7675;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:40,0:39:99:142,0,257	1/1:1,8:9:6.02:93,6,0	0/0:45,0:18:31.10:0,31,427	0/0:58,0:23:36.61:0,37,498	0/0:18,0:18:23.34:0,23,191	0/0:8,0:8:8.92:0,9,66	0/0:26,0:26:23.19:0,23,272	0/0:26,0:26:70.92:0,71,662	0/0:17,0:17:1.63:0,2,130	0/0:10,0:10:20.75:0,21,195	0/0:17,0:17:26.90:0,27,216	0/1:19,0:19:32.28:32,0,124	0/0:11,0:11:23.42:0,23,185	0/1:18,0:18:2.16:2,0,87	0/1:8,0:8:0.33:0,0,54	1/1:1,18:19:8.33:176,8,0	0/0:25,0:24:8.28:0,8,196	0/1:27,0:26:89.61:122,0,90	1/1:13,0:13:38.87:317,39,0	1/1:13,0:13:3.01:40,3,0	1/1:28,0:26:2.98:21,3,0	0/1:12,0:11:16.67:17,0,91	0/1:11,0:11:58.30:58,0,65	0/1:26,0:26:99:151,0,127	0/0:13,0:13:14.90:0,15,112	0/0:21,0:21:23.51:0,24,376	1/1:11,0:11:3.50:79,3,0	0/1:8,0:8:3.08:3,0,95
chr10	54888341	.	C	CAAAAAAAAAAAA	18902.98	PASS	AB=1.000;AC=51;AF=0.911;AN=56;BaseQRankSum=0.246;DP=413;FS=1.247;HRun=9;HaplotypeScore=150.9035;InbreedingCoeff=0.7268;MQ=48.66;MQ0=7;MQRankSum=-4.496;QD=48.47;ReadPosRankSum=0.861;VQSLOD=1.4795;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:17:35.10:1247,35,0	1/1:9,0:8:12.04:511,12,0	0/0:9,0:5:12.01:0,12,300	0/0:14,0:10:18.85:0,19,267	1/1:22,0:13:3.01:76,3,0	1/1:24,0:20:45.12:1592,45,0	1/1:16,0:14:21.07:777,21,0	1/1:25,0:18:40.90:1363,41,0	1/1:13,0:13:27.56:809,28,0	1/1:23,0:19:36.07:955,36,0	1/1:10,0:9:21.07:527,21,0	1/1:16,0:14:30.10:1199,30,0	1/1:19,0:16:30.09:1159,30,0	1/1:12,0:10:21.03:841,21,0	1/1:10,0:10:15.05:463,15,0	1/1:19,0:18:36.08:970,36,0	1/1:16,0:13:21.07:954,21,0	1/1:10,0:9:12:431,12,0	1/1:9,0:7:18.06:533,18,0	1/1:25,0:21:27.09:901,27,0	0/1:4,0:4:0:0,0,0	1/1:7,0:7:9:150,9,0	1/1:2,11:16:4.59:133,5,0	1/1:8,0:8:11.59:370,12,0	1/1:10,0:8:12.04:472,12,0	1/1:26,0:21:48.16:1235,48,0	1/1:14,0:12:24.07:572,24,0	1/1:8,0:7:18.02:660,18,0
chr10	54888417	.	A	AGTT	7709.29	PASS	AB=0.750;AC=23;AF=0.411;AN=56;BaseQRankSum=11.438;DP=436;FS=20.518;HRun=0;HaplotypeScore=116.7492;InbreedingCoeff=0.9067;MQ=67.82;MQ0=0;MQRankSum=-15.090;QD=41.90;ReadPosRankSum=1.861;VQSLOD=4.2422;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:66.23:0,66,1230	0/0:5,0:5:15.05:0,15,280	0/0:11,0:11:29.78:0,30,456	0/0:19,0:17:37.45:0,37,544	1/1:2,16:18:23.15:539,23,0	1/1:5,14:19:33.66:820,34,0	0/1:4,2:6:10.14:104,0,10	1/1:7,10:17:40.34:616,40,0	1/1:1,14:15:45.15:788,45,0	1/1:4,11:15:37.77:668,38,0	1/1:2,12:14:4.88:518,5,0	0/0:15,0:15:45.15:0,45,836	0/0:17,0:17:48.16:0,48,892	1/1:0,16:16:45.15:798,45,0	1/1:2,15:17:45.15:786,45,0	0/0:20,0:20:60.21:0,60,1116	0/0:15,0:15:39.13:0,39,726	0/0:11,0:11:30.10:0,30,559	0/0:15,0:15:42.14:0,42,780	0/0:15,0:15:45.15:0,45,836	0/0:20,0:20:60.21:0,60,1098	0/0:16,0:16:48.16:0,48,895	0/0:13,0:13:30.10:0,30,559	0/0:15,0:15:45.12:0,45,798	1/1:0,14:14:21.62:674,22,0	1/1:7,22:29:69:1181,69,0	0/0:22,0:22:60.21:0,60,1118	1/1:0,4:4:12.04:218,12,0
chr10	54888418	.	C	CTCT	8275.35	PASS	AB=0.585;AC=23;AF=0.411;AN=56;BaseQRankSum=11.611;DP=463;FS=30.809;HRun=0;HaplotypeScore=124.5420;InbreedingCoeff=0.8491;MQ=66.58;MQ0=0;MQRankSum=-15.251;QD=39.98;ReadPosRankSum=0.004;VQSLOD=3.4866;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:69.20:0,69,1251	0/0:5,0:5:15.05:0,15,280	0/0:11,0:11:28.52:0,29,473	0/0:19,0:17:38.91:0,39,532	1/1:5,16:21:35.95:558,36,0	1/1:9,14:23:59.98:870,60,0	1/1:5,2:10:16.20:230,16,0	1/1:7,10:21:0.35:831,0,0	1/1:2,14:16:48.12:807,48,0	1/1:3,11:15:1.39:670,1,0	1/1:5,12:17:41.98:626,42,0	0/0:15,0:15:45.15:0,45,832	0/0:17,0:17:48.16:0,48,895	1/1:1,16:17:48.16:832,48,0	1/1:3,15:18:48.11:803,48,0	0/0:20,0:20:60.21:0,60,1116	0/0:16,0:16:39.13:0,39,727	0/0:11,0:11:33.09:0,33,582	0/0:16,0:16:45.15:0,45,812	0/0:15,0:15:45.15:0,45,831	0/0:21,0:21:60.21:0,60,1115	0/0:17,0:17:48.16:0,48,895	0/0:13,0:13:30.10:0,30,559	0/0:15,0:15:45.15:0,45,777	1/1:0,14:14:42.14:725,42,0	0/1:9,22:31:46:1106,0,46	0/0:22,0:22:63.20:0,63,1143	1/1:0,4:4:12.04:218,12,0
chr10	54889221	.	TACAC	T	1147.60	PASS	AB=0.780;AC=13;AF=0.271;AN=48;BaseQRankSum=-0.235;DP=435;FS=1.965;HRun=0;HaplotypeScore=84.1144;InbreedingCoeff=0.5409;MQ=63.36;MQ0=15;MQRankSum=1.631;QD=9.64;ReadPosRankSum=2.068;VQSLOD=2.7141;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:16,1:17:12.04:181,12,0	0/1:9,0:9:15.82:16,0,133	./.	./.	0/0:11,0:17:15.05:0,15,267	0/0:14,0:21:15.31:0,15,217	0/0:12,0:12:9.03:0,9,170	0/0:20,0:20:2.94:0,3,18	0/0:12,0:16:14.75:0,15,242	0/0:17,0:18:24.55:0,25,475	0/0:18,0:18:21.07:0,21,404	1/1:4,7:11:12.04:186,12,0	1/1:10,5:17:18.05:242,18,0	0/0:7,0:15:18.06:0,18,327	0/0:10,0:17:15.05:0,15,272	0/0:18,0:18:21.07:0,21,347	0/1:11,7:18:5.16:196,0,5	0/1:10,5:15:4.97:196,0,5	0/0:13,0:13:6.02:0,6,76	./.	0/0:8,0:13:6.02:0,6,105	1/1:6,7:13:6:93,6,0	./.	1/1:11,5:16:5.53:195,6,0	0/0:6,0:11:3.01:0,3,52	0/0:18,0:19:24.08:0,24,508	0/0:13,0:15:12.01:0,12,148	0/0:5,0:4:6.02:0,6,108
chr10	54889235	.	C	CACACAT	866.34	PASS	AB=0.967;AC=5;AF=0.089;AN=56;BaseQRankSum=-1.642;DP=498;FS=3.322;HRun=0;HaplotypeScore=111.2551;InbreedingCoeff=0.3602;MQ=52.86;MQ0=22;MQRankSum=-2.564;QD=13.13;ReadPosRankSum=3.131;VQSLOD=2.7822;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:41.52:0,42,409	0/1:8,0:8:6.54:215,0,7	0/0:20,0:7:14.95:0,15,118	0/0:23,0:10:24:0,24,222	0/0:16,0:16:35.43:0,35,308	0/0:25,0:25:36.21:0,36,388	0/0:12,0:12:18.14:0,18,224	0/0:21,0:20:56.75:0,57,455	0/0:17,0:17:32.14:0,32,242	0/0:25,0:25:63.37:0,63,536	0/0:17,0:15:38.69:0,39,342	0/0:19,0:19:36:0,36,392	0/0:19,0:19:48.01:0,48,532	0/0:19,0:19:28.92:0,29,206	0/0:19,0:19:40.57:0,41,282	1/1:0,19:23:20.97:711,21,0	0/0:23,0:22:47.96:0,48,502	0/0:25,0:24:56.98:0,57,531	0/0:8,0:8:17.84:0,18,128	0/0:14,0:12:20.91:0,21,164	0/1:16,0:14:28.41:28,0,103	0/0:18,0:18:24.35:0,24,237	0/0:7,0:7:8.90:0,9,72	0/0:23,0:22:47.68:0,48,484	0/0:10,0:9:11.74:0,12,88	0/0:20,0:20:47.12:0,47,437	0/1:18,0:16:34.28:34,0,123	0/0:6,0:5:8.98:0,9,119
chr10	54890813	.	A	AT	16931.69	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-7.148;DP=592;FS=1.758;HRun=8;HaplotypeScore=50.0250;InbreedingCoeff=0.9840;MQ=71.91;MQ0=0;MQRankSum=-6.806;QD=29.65;ReadPosRankSum=3.818;VQSLOD=4.6666;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,16:20:48.14:554,48,0	1/1:3,4:7:15.04:173,15,0	0/0:12,0:13:32.03:0,32,274	0/0:8,0:8:19.80:0,20,163	1/1:2,43:46:99:1434,126,0	1/1:2,21:23:35.72:665,36,0	1/1:0,15:15:42.12:485,42,0	1/1:3,26:29:81.21:921,81,0	1/1:2,22:24:63.19:727,63,0	1/1:2,28:30:84.24:960,84,0	1/1:1,28:30:81.07:915,81,0	1/1:3,13:16:36.05:400,36,0	1/1:0,20:20:60.18:692,60,0	1/1:2,18:20:23.68:526,24,0	1/1:5,24:29:20.29:741,20,0	1/1:1,18:19:54.16:623,54,0	1/1:5,13:18:39.12:450,39,0	1/1:3,21:24:54.16:623,54,0	1/1:4,20:24:60.17:682,60,0	1/1:4,24:28:72.18:817,72,0	1/1:0,10:10:30.09:346,30,0	1/1:1,12:13:36.11:415,36,0	1/1:4,18:22:26.69:561,27,0	1/1:3,10:13:30.09:346,30,0	1/1:2,14:16:42.12:485,42,0	1/1:3,20:23:60.18:693,60,0	1/1:1,36:37:99:1246,108,0	1/1:2,13:15:39.12:450,39,0
chr10	54891014	.	C	CTG	36608.68	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-9.684;DP=744;FS=0.608;HRun=0;HaplotypeScore=69.5561;InbreedingCoeff=0.9968;MQ=84.79;MQ0=0;MQRankSum=-10.602;QD=52.37;ReadPosRankSum=6.195;VQSLOD=5.7988;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,36:36:99:2062,108,0	1/1:0,9:9:21.07:380,21,0	0/0:24,0:24:66.18:0,66,932	0/0:21,0:21:36.37:0,36,716	1/1:1,32:33:93.32:1773,93,0	1/1:1,20:21:63.22:1212,63,0	1/1:1,25:27:69.24:1333,69,0	1/1:5,32:37:99:1896,102,0	1/1:3,23:26:72.25:1391,72,0	1/1:3,40:43:99:2464,129,0	1/1:1,18:19:54.18:996,54,0	1/1:1,22:23:63.22:1217,63,0	1/1:1,31:33:84.29:1623,84,0	1/1:2,18:22:57.20:1094,57,0	1/1:0,37:38:99:2029,105,0	1/1:0,33:34:96.33:1855,96,0	1/1:0,19:19:54.19:1043,54,0	1/1:3,25:28:75.26:1436,75,0	1/1:3,20:23:66.23:1271,66,0	1/1:0,27:28:75.26:1425,75,0	1/1:3,23:26:66.23:1275,66,0	1/1:3,30:33:87.30:1657,87,0	1/1:0,22:22:63.22:1217,63,0	1/1:0,17:17:48.16:927,48,0	1/1:3,24:27:69.24:1333,69,0	1/1:0,25:26:78.27:1498,78,0	1/1:1,39:41:90.31:1738,90,0	1/1:0,8:8:24.08:464,24,0
chr10	54891443	.	TC	T	14403.21	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-5.893;DP=680;FS=20.960;HRun=8;HaplotypeScore=72.0878;InbreedingCoeff=0.9850;MQ=73.30;MQ0=0;MQRankSum=-5.819;QD=22.68;ReadPosRankSum=6.624;VQSLOD=3.3226;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:10,37:47:99:1067,111,0	1/1:0,8:8:21.03:201,21,0	0/0:16,0:14:36.08:0,36,386	0/0:29,0:27:63.79:0,64,660	1/1:6,11:17:39.04:374,39,0	1/1:2,12:14:33.05:316,33,0	1/1:3,26:29:69.11:666,69,0	1/1:4,27:31:69.07:658,69,0	1/1:4,20:24:57.08:547,57,0	1/1:1,18:19:54.07:517,54,0	1/1:5,11:16:20.97:203,21,0	1/1:4,31:35:78.12:753,78,0	1/1:3,25:28:62.94:608,63,0	1/1:4,30:34:84.13:810,84,0	1/1:0,33:33:75.12:724,75,0	1/1:1,30:31:72.12:695,72,0	1/1:1,30:31:81.13:782,81,0	1/1:1,22:23:60.10:579,60,0	1/1:1,18:19:51.08:491,51,0	1/1:6,7:13:21.02:202,21,0	1/1:5,51:56:99:1388,144,0	1/1:1,13:14:19.06:353,19,0	1/1:1,11:12:24.04:232,24,0	1/1:4,20:24:40.18:530,40,0	1/1:1,21:22:54.08:521,54,0	1/1:8,16:24:57.05:541,57,0	1/1:2,18:21:50.11:469,50,0	1/1:2,8:10:18.03:174,18,0
chr10	54891607	.	G	GC	6404.69	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-13.586;DP=706;FS=1.061;HRun=5;HaplotypeScore=67.3732;InbreedingCoeff=0.9971;MQ=88.95;MQ0=0;MQRankSum=-5.009;QD=31.24;ReadPosRankSum=4.756;VQSLOD=5.3150;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,38:44:99:1368,105,0	0/0:9,0:9:27.07:0,27,289	0/0:27,0:27:67.97:0,68,745	0/0:26,0:26:59.76:0,60,604	0/0:27,0:27:78.20:0,78,838	0/0:21,0:21:63.13:0,63,666	0/0:30,0:30:81.18:0,81,861	0/0:31,0:31:75.17:0,75,791	0/0:18,0:18:54.12:0,54,572	0/0:37,0:37:90.21:0,90,956	0/0:17,0:17:48.12:0,48,515	1/1:4,21:25:48.16:631,48,0	1/1:1,24:25:66.21:868,66,0	0/0:28,0:28:75.19:0,75,806	0/0:34,0:34:87.22:0,87,935	0/0:30,0:30:78.12:0,78,814	1/1:4,17:21:48.15:621,48,0	1/1:1,23:24:63.20:827,63,0	0/0:16,0:16:36.08:0,36,387	0/0:22,0:22:63.10:0,63,649	0/0:40,0:40:99:0,108,1160	1/1:1,20:21:51.17:669,51,0	1/1:1,14:15:36.12:473,36,0	1/1:2,28:30:72.23:947,72,0	0/0:14,0:14:42.11:0,42,450	0/0:34,0:34:96.22:0,96,1022	0/0:31,0:31:81.20:0,81,868	0/0:9,0:9:15.04:0,15,161
chr10	54891741	.	G	GA	10207.27	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-3.248;DP=578;FS=7.539;HRun=9;HaplotypeScore=111.3233;InbreedingCoeff=0.9148;MQ=82.21;MQ0=0;MQRankSum=-7.557;QD=19.01;ReadPosRankSum=3.699;VQSLOD=4.2990;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:12,0:23:37.16:203,37,0	1/1:2,0:8:20.04:111,20,0	0/0:18,0:17:4.82:0,5,224	0/0:23,0:23:42.98:0,43,336	1/1:4,21:25:57.15:631,57,0	1/1:2,17:19:57.08:608,57,0	1/1:3,21:24:54.13:588,54,0	1/1:5,28:34:76.18:870,76,0	1/1:2,9:11:30.07:325,30,0	1/1:11,16:27:34.11:590,34,0	1/1:3,16:19:51.14:564,51,0	1/1:6,0:14:31.27:163,31,0	1/1:12,1:17:29.17:176,29,0	1/1:5,18:23:58.39:625,58,0	1/1:2,26:28:78.21:863,78,0	1/1:5,2:26:68.83:398,69,0	1/1:9,0:21:47.97:252,48,0	1/1:11,1:22:49:273,49,0	1/1:13,0:21:42.07:209,42,0	1/1:13,0:28:65.01:333,65,0	1/1:6,0:16:29.25:155,29,0	1/1:5,0:20:41.67:224,42,0	1/1:11,0:19:37.12:194,37,0	1/1:3,0:13:20.58:112,21,0	1/1:4,12:16:45.07:476,45,0	1/1:7,22:30:75.04:810,75,0	1/1:16,0:26:53.20:319,53,0	1/1:4,2:6:14.98:135,15,0
chr10	54891801	.	T	TC	9614.87	PASS	AB=0.941;AC=53;AF=0.946;AN=56;BaseQRankSum=-0.874;DP=559;FS=18.365;HRun=8;HaplotypeScore=110.3435;InbreedingCoeff=0.7483;MQ=78.08;MQ0=1;MQRankSum=-5.019;QD=17.90;ReadPosRankSum=4.689;VQSLOD=3.7212;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:13,1:29:51.64:277,52,0	1/1:4,0:9:8.65:49,9,0	0/0:21,0:19:35.39:0,35,291	0/1:15,0:15:3.03:3,0,45	1/1:4,18:22:51.07:570,51,0	1/1:3,16:19:51.07:570,51,0	1/1:5,10:15:30.09:346,30,0	1/1:11,14:25:38.99:405,39,0	1/1:3,10:13:36.07:383,36,0	1/1:4,21:25:66.66:757,67,0	1/1:1,15:16:39.11:447,39,0	1/1:3,0:9:17.04:87,17,0	1/1:1,1:18:28.58:164,29,0	1/1:2,27:29:75.22:865,75,0	1/1:4,19:23:66.13:734,66,0	1/1:2,0:21:42.75:224,43,0	1/1:2,0:33:85.42:439,85,0	1/1:0,0:14:34.09:173,34,0	1/1:12,0:12:29.23:132,29,0	1/1:31,0:31:52.15:289,52,0	1/1:24,0:24:42.13:198,42,0	1/1:9,0:20:40:214,40,0	1/1:7,0:19:34.16:174,34,0	1/1:1,1:13:25.57:130,26,0	1/1:2,13:15:36.04:399,36,0	1/1:5,30:35:96.24:1077,96,0	1/1:25,0:24:58.70:269,59,0	1/1:0,7:7:21.06:242,21,0
chr10	54891803	.	C	CCCCT	6071.78	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=1.206;DP=572;FS=0.443;HRun=0;HaplotypeScore=156.9650;InbreedingCoeff=0.4864;MQ=74.22;MQ0=1;MQRankSum=-3.052;QD=21.08;ReadPosRankSum=4.319;VQSLOD=4.3227;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:29:40.51:41,0,72	0/1:9,0:9:15.12:15,0,40	0/0:21,0:18:37.93:0,38,639	0/0:12,0:11:22.97:0,23,259	0/0:21,0:21:55.38:0,55,319	0/0:19,0:19:51:0,51,283	0/0:16,0:16:38.02:0,38,235	0/0:25,0:25:51.48:0,51,368	0/0:14,0:14:32.60:0,33,192	0/0:31,0:31:71.54:0,72,402	0/0:16,0:16:37.78:0,38,208	0/1:10,0:10:5.29:5,0,12	0/1:19,0:19:6.82:7,0,22	0/0:29,0:29:72.56:0,73,394	0/0:24,0:24:61.08:0,61,350	1/1:21,0:21:14:35,14,0	0/1:34,0:34:12.71:35,0,13	1/1:14,0:14:12.24:35,12,0	1/1:2,11:17:42.10:998,42,0	1/1:2,28:31:84.22:1961,84,0	1/1:3,21:25:48.16:1224,48,0	1/1:20,0:20:2.34:29,2,0	0/1:19,0:19:8.04:8,0,45	0/1:14,0:14:8.45:10,0,8	0/0:15,0:15:34.94:0,35,205	0/0:34,0:34:95.55:0,96,540	1/1:4,21:25:72.09:1669,72,0	0/0:7,0:7:20.32:0,20,110
chr10	54893268	.	G	GAA	6613.08	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-3.181;DP=672;FS=0.322;HRun=9;HaplotypeScore=87.6572;InbreedingCoeff=0.9871;MQ=74.30;MQ0=1;MQRankSum=-1.025;QD=23.87;ReadPosRankSum=1.516;VQSLOD=4.4339;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,21:26:56.16:802,56,0	0/0:14,0:15:36.03:0,36,431	0/0:22,0:19:31.18:0,31,264	0/0:11,0:11:15.58:0,16,124	0/0:34,0:36:92.63:0,93,925	0/0:19,0:19:54.11:0,54,565	0/0:20,0:20:42.09:0,42,447	0/0:36,0:36:68.51:0,69,693	0/0:23,0:25:62.58:0,63,614	0/0:32,0:32:84.20:0,84,889	0/0:33,0:33:78.13:0,78,821	1/1:4,21:26:50.66:740,51,0	1/1:4,13:18:39.10:598,39,0	0/0:22,0:22:38.71:0,39,605	0/0:28,0:28:75.13:0,75,783	0/0:22,0:22:57.10:0,57,584	1/1:5,16:21:16.36:641,16,0	1/1:5,26:34:77.24:1126,77,0	1/1:9,2:16:31.96:216,32,0	1/1:7,0:23:8.44:132,8,0	1/1:4,0:20:34.81:120,35,0	1/1:3,19:23:56.74:745,57,0	1/1:2,17:22:47.64:667,48,0	1/1:3,19:22:42.14:647,42,0	0/0:28,0:29:77.86:0,78,791	0/0:30,0:30:78.17:0,78,830	1/1:2,0:25:52.28:180,52,0	0/0:14,0:14:42.11:0,42,447
chr10	54893862	.	T	TGGG	12870.31	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-4.521;DP=245;FS=3.422;HRun=1;HaplotypeScore=35.6053;InbreedingCoeff=0.7083;MQ=55.00;MQ0=2;MQRankSum=-2.489;QD=56.95;ReadPosRankSum=1.769;VQSLOD=5.1678;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,19:21:51.17:1171,51,0	1/1:0,3:4:9.03:211,9,0	0/0:7,0:2:6:0,6,76	0/0:12,0:7:21.07:0,21,353	1/1:0,3:4:6.02:137,6,0	1/1:0,6:6:18.06:426,18,0	1/1:0,8:8:24.08:567,24,0	1/1:4,19:21:51.18:1205,51,0	1/1:1,3:4:12.04:282,12,0	1/1:3,7:10:27.09:579,27,0	1/1:0,2:2:3.01:71,3,0	1/1:0,7:7:18.06:425,18,0	1/1:3,4:8:21.07:491,21,0	1/1:1,6:8:17.56:413,18,0	1/1:2,5:7:11.92:283,12,0	1/1:2,4:5:15.05:340,15,0	1/1:1,11:11:24.08:567,24,0	1/1:1,10:10:30.10:678,30,0	1/1:1,10:11:30.10:669,30,0	1/1:1,10:11:30.10:689,30,0	1/1:1,10:12:30.10:709,30,0	1/1:0,8:7:21.07:483,21,0	1/1:1,5:6:15.05:341,15,0	1/1:1,3:4:9.03:200,9,0	1/1:2,4:6:12.04:284,12,0	1/1:0,7:8:24.06:519,24,0	1/1:0,12:12:30.10:706,30,0	1/1:0,6:6:18.06:425,18,0
chr10	54893937	.	A	AAAAT	1691.42	PASS	AB=1.000;AC=31;AF=0.738;AN=42;BaseQRankSum=-1.691;DP=238;FS=8.337;HRun=0;HaplotypeScore=69.7966;InbreedingCoeff=0.5031;MQ=38.13;MQ0=5;MQRankSum=-3.128;QD=13.11;ReadPosRankSum=-5.008;VQSLOD=0.0396;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:5,0:7:6.02:117,6,0	1/1:5,0:5:0.47:1,0,0	./.	./.	./.	1/1:5,0:5:3.01:52,3,0	./.	1/1:26,0:26:16.85:92,17,0	1/1:6,0:6:9.03:156,9,0	1/1:7,0:7:6.02:106,6,0	1/1:7,0:7:3.01:61,3,0	1/1:2,2:4:6.02:140,6,0	1/1:1,1:2:3.01:70,3,0	./.	1/1:9,0:8:3.01:65,3,0	0/0:7,0:7:3:0,3,28	0/0:12,0:11:21.07:0,21,320	0/0:6,0:5:6.01:0,6,74	0/0:18,0:17:3:0,3,28	0/1:5,0:5:0:0,0,0	1/1:3,0:3:0.47:1,0,0	1/1:7,1:7:3.01:52,3,0	./.	./.	1/1:11,0:11:6.02:116,6,0	1/1:9,0:8:12.04:218,12,0	0/0:8,0:8:6.01:0,6,56	1/1:13,0:15:33.11:574,33,0
chr10	54893940	.	AT	A	145.75	PASS	AC=8;AF=0.148;AN=54;BaseQRankSum=5.210;DP=220;FS=2.319;HRun=1;HaplotypeScore=39.9793;InbreedingCoeff=0.6478;MQ=39.41;MQ0=1;MQRankSum=-2.713;QD=6.34;ReadPosRankSum=1.008;VQSLOD=0.7535;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:7:12.39:0,12,139	0/0:5,0:5:9.92:0,10,128	0/0:12,0:5:14.71:0,15,166	0/0:11,0:3:6.46:0,6,66	0/0:10,0:9:5.61:0,6,85	0/0:5,0:5:12.02:0,12,152	0/0:5,0:4:9.03:0,9,127	0/0:32,0:32:94.49:0,94,1013	0/0:6,0:6:14.76:0,15,113	0/0:5,0:5:14.99:0,15,173	0/0:6,0:6:8.86:0,9,76	0/0:4,0:4:11.96:0,12,114	0/0:2,0:2:3:0,3,27	0/0:4,0:4:12.04:0,12,173	0/0:9,0:8:20.74:0,21,220	0/0:8,0:7:17.87:0,18,228	0/0:12,0:11:33.11:0,33,486	0/0:8,0:7:11.88:0,12,135	1/1:5,8:12:2.86:122,3,0	1/1:0,2:2:5.95:42,6,0	1/1:3,0:3:2.94:18,3,0	0/0:6,0:5:8.51:0,9,93	0/0:6,0:6:15.05:0,15,211	./.	0/0:9,0:9:26.72:0,27,262	0/0:8,0:8:23.90:0,24,251	1/1:1,4:5:11.95:91,12,0	0/0:15,0:15:36.45:0,36,304
chr10	54893944	.	AT	A	134.71	PASS	AB=0.667;AC=7;AF=0.130;AN=54;BaseQRankSum=5.259;DP=217;FS=3.926;HRun=1;HaplotypeScore=38.5722;InbreedingCoeff=0.6194;MQ=41.41;MQ0=1;MQRankSum=-2.499;QD=6.12;ReadPosRankSum=2.020;VQSLOD=0.8140;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:18.79:0,19,196	0/0:5,0:5:9.92:0,10,132	0/0:11,0:5:14.96:0,15,171	0/0:10,0:3:6.85:0,7,65	0/0:10,0:9:8.93:0,9,86	0/0:6,0:6:18.04:0,18,228	0/0:5,0:4:9.03:0,9,130	0/0:34,0:34:99:0,99,1327	0/0:4,0:4:12.04:0,12,178	0/0:6,0:6:18.03:0,18,232	0/0:4,0:4:6.02:0,6,88	0/0:3,0:3:9.02:0,9,99	0/0:1,0:1:3:0,3,28	0/0:4,0:4:11.97:0,12,152	0/0:7,0:6:14.88:0,15,192	0/0:8,0:7:15.75:0,16,143	0/0:15,0:14:42.08:0,42,568	0/0:9,0:8:15.92:0,16,207	0/1:6,5:11:0.48:113,0,0	1/1:0,2:2:5.95:42,6,0	1/1:3,0:3:2.97:20,3,0	0/0:4,0:3:8.94:0,9,100	0/0:4,0:4:11.95:0,12,148	./.	0/0:9,0:9:23.99:0,24,334	0/0:8,0:8:24.03:0,24,333	1/1:1,2:5:11.90:85,12,0	0/0:18,0:18:51.17:0,51,721
chr10	54895910	.	C	CT	737.11	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-6.974;DP=727;FS=1.690;HRun=7;HaplotypeScore=67.7467;InbreedingCoeff=0.8775;MQ=65.63;MQ0=2;MQRankSum=-0.255;QD=24.57;ReadPosRankSum=1.777;VQSLOD=4.3174;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,114,1093	0/0:7,0:7:18.02:0,18,174	0/0:18,0:13:33.02:0,33,309	0/0:19,0:16:4.76:0,5,176	0/0:36,0:36:90.13:0,90,868	0/0:27,0:27:72.11:0,72,694	0/0:21,0:21:57.09:0,57,550	0/0:40,0:40:99:0,99,956	1/1:4,26:30:69.21:832,69,0	0/0:33,0:33:87.13:0,87,840	0/0:24,0:24:69.10:0,69,660	0/0:25,0:25:69.11:0,69,666	0/0:21,0:21:57.09:0,57,550	0/0:18,0:18:45.06:0,45,429	0/0:28,0:28:69.10:0,69,666	0/0:27,0:27:72.10:0,72,690	0/0:25,0:25:66.10:0,66,637	0/0:31,0:31:81.10:0,81,776	0/0:18,0:18:48.07:0,48,463	0/0:29,0:29:78.11:0,78,747	0/0:14,0:14:39.06:0,39,376	0/0:25,0:25:60.07:0,60,574	0/0:38,0:38:93.13:0,93,892	0/0:19,0:19:47.91:0,48,451	0/0:23,0:23:63.10:0,63,608	0/0:30,0:30:75.11:0,75,724	0/0:39,0:39:84.11:0,84,805	0/0:17,0:17:51.08:0,51,492
chr10	54896205	.	A	AG	13164.24	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-17.627;DP=679;FS=1.595;HRun=0;HaplotypeScore=57.7792;InbreedingCoeff=0.9998;MQ=84.73;MQ0=0;MQRankSum=-7.852;QD=44.78;ReadPosRankSum=4.497;VQSLOD=4.9925;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,20:20:57.19:911,57,0	0/0:9,0:9:27.08:0,27,355	0/0:18,0:18:54.18:0,54,753	0/0:23,0:23:56.22:0,56,753	0/0:37,0:37:99:0,111,1552	0/0:24,0:24:72.21:0,72,958	0/0:21,0:21:63.20:0,63,865	0/0:33,0:33:99:0,99,1336	0/0:20,0:20:60.19:0,60,824	0/0:26,0:26:75.25:0,75,1033	0/0:25,0:25:75.25:0,75,1048	1/1:0,16:16:45.15:719,45,0	1/1:0,16:16:42.14:667,42,0	0/0:16,0:16:48.15:0,48,652	0/0:27,0:27:78.21:0,78,1012	0/0:22,0:22:66.22:0,66,923	1/1:1,16:17:42.14:671,42,0	1/1:0,20:20:57.19:910,57,0	1/1:0,32:32:96.30:1505,96,0	1/1:0,41:41:99:1839,117,0	1/1:0,17:17:48.16:767,48,0	1/1:0,28:28:81.28:1294,81,0	1/1:0,26:26:78.27:1246,78,0	1/1:0,25:25:66.23:1054,66,0	0/0:27,0:27:81.24:0,81,1097	0/0:34,0:34:99:0,102,1396	1/1:1,35:34:99:1581,99,0	0/0:23,0:23:66.22:0,66,922
chr10	54897256	.	CCCAGCCCCTCCAGCCCCT	C	1438.43	PASS	AC=6;AF=0.115;AN=52;BaseQRankSum=6.045;DP=346;FS=0.000;HRun=0;HaplotypeScore=168.3862;InbreedingCoeff=0.8484;MQ=70.51;MQ0=0;MQRankSum=-1.683;QD=33.45;ReadPosRankSum=1.147;VQSLOD=2.3600;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:21.07:0,21,1624	./.	0/0:17,0:14:18.06:0,18,670	0/0:17,0:17:27.09:0,27,1381	0/0:11,0:11:15.05:0,15,772	0/0:9,0:9:21.07:0,21,984	0/0:12,0:12:24.08:0,24,1376	0/0:18,0:18:21.06:0,21,1021	0/0:20,0:20:42.14:0,42,3337	0/0:10,0:10:18.06:0,18,1113	0/0:4,0:4:6.02:0,6,512	0/0:17,0:17:33.11:0,33,2397	0/0:13,0:13:30.10:0,30,2108	0/0:10,0:10:24.08:0,24,1952	0/0:17,0:17:42.13:0,42,3189	0/0:9,0:9:21.07:0,21,1459	0/0:24,0:24:63.22:0,63,5048	0/0:7,0:7:21.07:0,21,1384	1/1:12,3:15:9:326,9,0	1/1:7,8:15:23.94:797,24,0	./.	0/0:6,0:6:15.05:0,15,1030	0/0:6,0:6:12.04:0,12,1009	0/0:16,0:16:36.12:0,36,2522	0/0:3,0:3:9.03:0,9,750	0/0:12,0:12:30.10:0,30,1930	1/1:8,5:13:9.03:443,9,0	0/0:3,0:3:9.03:0,9,595
chr10	54897462	.	A	ACACTCACT	1606.19	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-0.649;DP=540;FS=13.283;HRun=0;HaplotypeScore=149.5976;InbreedingCoeff=0.9135;MQ=74.50;MQ0=4;MQRankSum=-1.669;QD=18.25;ReadPosRankSum=-3.561;VQSLOD=1.6069;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:30.57:0,31,492	0/0:5,0:5:12.51:0,13,206	0/0:23,0:13:20.47:0,20,314	0/0:37,0:23:31.79:0,32,572	0/0:19,0:19:57.19:0,57,986	0/0:20,0:20:42.06:0,42,701	0/0:25,0:24:57.19:0,57,954	0/0:28,0:27:69.22:0,69,1199	0/0:15,0:15:30.10:0,30,532	0/0:13,0:13:27:0,27,446	0/0:15,0:15:30.09:0,30,471	0/0:20,0:20:45.12:0,45,720	0/0:18,0:18:39.60:0,40,730	0/0:26,0:26:2.43:0,2,508	0/0:11,0:11:27.55:0,28,457	0/0:17,0:17:44.50:0,45,729	0/0:15,0:15:32.44:0,32,479	0/0:19,0:19:44.46:0,44,766	1/1:14,0:16:41.96:666,42,0	1/1:22,0:22:14.91:174,15,0	1/1:28,0:28:48.54:764,49,0	0/0:17,0:17:27.55:0,28,421	0/0:13,0:13:21.07:0,21,364	0/0:31,0:31:53.52:0,54,887	0/0:23,0:23:54.66:0,55,933	0/0:15,0:15:36.59:0,37,687	1/1:4,18:22:8.31:155,8,0	0/0:8,0:8:21.07:0,21,354
chr10	54897464	.	ACTCTCTCT	A	1391.27	PASS	AB=0.934;AC=19;AF=0.352;AN=54;BaseQRankSum=1.157;DP=579;FS=4.690;HRun=0;HaplotypeScore=139.6893;InbreedingCoeff=0.4773;MQ=72.23;MQ0=7;MQRankSum=-4.123;QD=6.27;ReadPosRankSum=3.594;VQSLOD=2.0658;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:17,6:23:3.01:38,3,0	0/0:7,0:6:3.01:0,3,62	0/0:22,0:12:0.47:0,0,1	0/0:37,0:23:0.89:0,1,2	0/1:19,0:20:4.60:5,0,60	0/1:19,0:19:53.60:54,0,167	0/0:22,0:27:11.99:0,12,115	0/0:30,0:29:3.06:0,3,8	1/1:9,11:20:6.02:149,6,0	0/0:10,0:12:15.01:0,15,205	0/0:15,0:15:6.02:0,6,118	1/1:16,7:23:6.02:149,6,0	1/1:11,9:22:14.64:334,15,0	0/0:31,0:31:22.01:0,22,773	0/0:9,0:13:5.98:0,6,49	0/0:20,0:20:11.88:0,12,349	1/1:14,0:14:3.01:61,3,0	1/1:14,5:20:12.04:242,12,0	0/0:17,0:17:18.03:0,18,484	0/0:22,0:22:12.04:0,12,364	0/0:30,0:30:14.77:0,15,455	./.	1/1:10,1:15:5.98:94,6,0	1/1:25,3:29:3.94:380,4,0	0/0:24,0:24:12.49:0,12,215	0/1:14,0:17:50.94:51,0,164	0/0:22,0:22:11.61:0,12,294	0/0:7,0:8:6:0,6,74
chr10	54897466	.	T	TCA	568.49	PASS	AB=0.784;AC=6;AF=0.107;AN=56;BaseQRankSum=5.831;DP=580;FS=3.401;HRun=0;HaplotypeScore=100.7768;InbreedingCoeff=0.5974;MQ=70.13;MQ0=10;MQRankSum=-1.406;QD=5.80;ReadPosRankSum=-0.860;VQSLOD=3.1316;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:31.56:0,32,251	0/0:7,0:6:11.42:0,11,102	0/0:22,0:12:20.58:0,21,192	0/0:35,0:21:22.73:0,23,293	0/0:22,0:21:56.74:0,57,468	0/0:20,0:20:42.36:0,42,352	0/0:30,0:27:53.66:0,54,440	0/0:34,0:33:75.67:0,76,649	0/0:20,0:20:29.96:0,30,249	0/0:11,0:11:26.68:0,27,231	0/0:13,0:12:29.96:0,30,248	0/0:23,0:23:44.96:0,45,378	0/0:22,0:22:38.51:0,39,317	0/0:31,0:31:31.02:0,31,290	0/0:13,0:13:26.51:0,27,219	0/0:20,0:20:50.51:0,51,423	0/0:14,0:14:29.81:0,30,223	0/0:20,0:20:44.45:0,44,367	1/1:22,0:22:6.12:251,6,0	0/1:5,16:21:39.10:68,0,39	1/1:33,0:33:11.56:364,12,0	0/0:17,0:17:26.10:0,26,218	0/0:14,0:14:20.97:0,21,173	0/0:27,0:27:53.37:0,53,425	0/0:20,0:20:54.80:0,55,469	0/0:15,0:15:36.78:0,37,326	0/1:22,0:22:2.26:2,0,19	0/0:9,0:8:20.94:0,21,168
chr10	54897939	.	AT	A	2869.48	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=10.859;DP=695;FS=0.000;HRun=2;HaplotypeScore=74.5819;InbreedingCoeff=0.9903;MQ=88.74;MQ0=0;MQRankSum=-5.351;QD=31.19;ReadPosRankSum=-0.475;VQSLOD=3.0264;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:27:81.23:0,81,1185	0/0:13,0:13:39.13:0,39,584	0/0:21,0:21:62.02:0,62,895	0/0:34,0:34:82.62:0,83,1170	0/0:34,0:34:96.32:0,96,1433	0/0:26,0:26:75.25:0,75,1123	0/0:18,0:18:54.17:0,54,788	0/0:35,0:35:96.32:0,96,1420	0/0:34,0:34:99:0,102,1510	0/0:28,0:28:78.26:0,78,1169	0/0:26,0:26:75.25:0,75,1106	0/0:21,0:21:63.21:0,63,944	0/0:28,0:28:81.27:0,81,1211	0/0:31,0:31:93.30:0,93,1372	0/0:24,0:24:72.24:0,72,1079	0/0:26,0:26:78.26:0,78,1168	0/0:27,0:27:78.23:0,78,1124	0/0:29,0:29:81.26:0,81,1192	1/1:3,14:17:48.15:609,48,0	1/1:1,31:32:87.27:1114,87,0	1/1:1,11:12:21.06:273,21,0	0/0:26,0:26:78.25:0,78,1149	0/0:23,0:23:69.22:0,69,1013	0/0:26,0:26:78.25:0,78,1150	0/0:19,0:19:54.18:0,54,806	0/0:22,0:22:63.21:0,63,943	1/1:2,29:31:81.25:1034,81,0	0/0:4,0:4:12.04:0,12,180
chr10	54897991	.	AGG	A	4327.97	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=12.392;DP=736;FS=2.300;HRun=4;HaplotypeScore=96.0817;InbreedingCoeff=0.9839;MQ=99.81;MQ0=0;MQRankSum=-6.575;QD=40.07;ReadPosRankSum=2.638;VQSLOD=4.0803;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:19:60.18:0,60,1091	0/0:12,0:12:36.11:0,36,636	0/0:40,0:40:99:0,104,1957	0/0:41,0:41:99:0,106,1780	0/0:20,0:20:60.19:0,60,1086	0/0:35,0:35:99:0,105,1966	0/0:16,0:16:45.15:0,45,843	0/0:40,0:40:99:0,114,2127	0/0:32,0:32:96.32:0,96,1767	0/0:22,0:22:63.22:0,63,1178	0/0:20,0:20:60.21:0,60,1117	0/0:23,0:23:69.22:0,69,1244	0/0:34,0:34:99:0,102,1910	0/0:30,0:30:90.31:0,90,1684	0/0:19,0:19:57.19:0,57,1039	0/0:22,0:22:66.23:0,66,1236	0/0:27,0:27:81.28:0,81,1518	0/0:35,0:35:99:0,102,1848	1/1:0,17:17:51.17:751,51,0	1/1:2,28:30:81.27:1192,81,0	1/1:0,25:25:69.23:1016,69,0	0/0:30,0:30:90.29:0,90,1652	0/0:30,0:30:87.30:0,87,1614	0/0:29,0:29:87.30:0,87,1624	0/0:29,0:29:87.30:0,87,1625	0/0:19,0:19:57.19:0,57,1039	1/1:2,34:36:93.31:1368,93,0	0/0:3,0:3:9.03:0,9,169
chr10	54898844	.	AAAC	A	4799.75	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=7.046;DP=513;FS=6.360;HRun=0;HaplotypeScore=84.4040;InbreedingCoeff=0.9856;MQ=72.85;MQ0=0;MQRankSum=-0.428;QD=30.00;ReadPosRankSum=3.414;VQSLOD=4.9081;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,21:25:44.96:621,45,0	0/0:3,0:3:9.03:0,9,189	0/0:17,0:17:15.85:0,16,359	0/0:23,0:18:23.96:0,24,411	0/0:24,0:24:69.20:0,69,1348	0/0:24,0:24:63.20:0,63,1280	0/0:20,0:20:45.15:0,45,943	0/0:25,0:25:48.15:0,48,924	0/0:18,0:18:45.14:0,45,886	0/0:23,0:23:57.02:0,57,1079	0/0:19,0:19:45.10:0,45,800	1/1:1,16:17:45.15:678,45,0	1/1:4,12:16:30.07:427,30,0	0/0:20,0:20:54.16:0,54,1061	0/0:13,0:13:27.09:0,27,548	0/0:11,0:11:27.09:0,27,566	1/1:4,24:27:51.17:768,51,0	1/1:4,34:38:65.43:1159,65,0	0/0:16,0:16:35.93:0,36,326	0/0:13,0:13:38.93:0,39,339	0/0:14,0:14:38.91:0,39,308	1/1:0,8:8:18.01:245,18,0	1/1:1,16:17:32.69:496,33,0	1/1:1,10:11:27.09:406,27,0	0/0:10,0:10:30.10:0,30,629	0/0:19,0:19:48.15:0,48,909	0/0:27,0:26:62.85:0,63,499	0/0:13,0:13:39.13:0,39,798
chr10	54898856	.	CA	C	1966.94	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=9.011;DP=497;FS=1.752;HRun=6;HaplotypeScore=75.4583;InbreedingCoeff=0.8804;MQ=73.10;MQ0=0;MQRankSum=-0.863;QD=25.54;ReadPosRankSum=-0.126;VQSLOD=3.5392;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:12.15:0,12,87	0/0:3,0:3:9.03:0,9,118	0/0:16,0:16:27.73:0,28,360	0/0:22,1:19:26.58:0,27,378	0/0:25,0:25:63.18:0,63,799	0/0:24,0:24:66.18:0,66,836	0/0:16,0:16:48.16:0,48,631	0/0:20,0:20:57.18:0,57,733	0/0:17,0:17:45.15:0,45,590	0/0:21,0:21:51.16:0,51,659	0/0:17,0:17:42.05:0,42,530	0/0:18,0:18:9.61:0,10,50	0/0:15,0:15:16.27:0,16,147	0/0:20,0:20:57.17:0,57,734	0/0:12,0:12:36.12:0,36,471	0/0:10,0:10:30.10:0,30,390	0/0:25,0:25:11.02:0,11,51	0/0:36,0:36:21.19:0,21,115	1/1:3,15:18:45.11:483,45,0	1/1:1,16:17:45.11:483,45,0	1/1:0,16:16:39.10:419,39,0	0/0:9,0:9:5.37:0,5,42	0/0:17,0:17:11.67:0,12,86	0/0:10,0:10:3.77:0,4,6	0/0:11,0:11:33.11:0,33,433	0/0:17,0:17:45.14:0,45,578	1/1:2,24:26:69.17:741,69,0	0/0:13,0:13:39.13:0,39,513
chr10	54899522	.	AC	A	682.89	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=6.219;DP=458;FS=0.729;HRun=7;HaplotypeScore=46.5981;InbreedingCoeff=0.9708;MQ=73.14;MQ0=1;MQRankSum=0.556;QD=23.55;ReadPosRankSum=-0.485;VQSLOD=3.0853;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:75.24:0,75,1029	0/0:6,0:6:18.05:0,18,235	0/0:24,0:20:17.63:0,18,449	0/0:21,0:14:15.67:0,16,308	0/0:11,0:11:33.11:0,33,459	0/0:19,0:19:54.17:0,54,737	0/0:31,0:31:90.27:0,90,1221	0/0:19,0:19:48.13:0,48,606	0/0:13,0:13:36.05:0,36,474	0/0:20,0:20:54.17:0,54,739	0/0:19,0:19:57.17:0,57,755	0/0:15,0:15:42.02:0,42,539	0/0:21,0:21:63.20:0,63,860	0/0:14,0:14:42.11:0,42,551	0/0:16,0:16:45.15:0,45,628	0/0:18,0:18:51.17:0,51,713	0/0:24,0:24:72.24:0,72,1005	0/0:23,0:23:69.20:0,69,942	1/1:1,5:6:18.02:193,18,0	1/1:2,4:6:12.04:141,12,0	1/1:1,7:8:18.05:216,18,0	0/0:10,0:10:30.10:0,30,416	0/0:16,0:16:42.14:0,42,586	0/0:7,0:7:18.06:0,18,251	0/0:25,0:25:66.20:0,66,890	0/0:22,0:22:63.21:0,63,879	1/1:0,9:9:24.07:288,24,0	0/0:5,0:5:15.05:0,15,210
chr10	54900146	.	TATACTTACTTAAC	T	3131.77	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.673;DP=742;FS=1.557;HRun=0;HaplotypeScore=342.6530;InbreedingCoeff=0.9976;MQ=79.91;MQ0=0;MQRankSum=-8.591;QD=84.64;ReadPosRankSum=2.009;VQSLOD=2.4440;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:93.31:0,93,4793	1/1:1,7:8:21.07:846,21,0	0/0:20,0:20:53.84:0,54,2524	0/0:16,0:16:48.06:0,48,2325	0/0:35,0:35:99:0,99,4977	0/0:27,0:27:69.17:0,69,3443	0/0:17,0:17:51.18:0,51,2772	0/0:34,0:34:96.33:0,96,5011	0/0:29,0:29:84.29:0,84,4301	0/0:27,0:27:81.28:0,81,4142	0/0:25,0:25:75.26:0,75,3961	0/0:31,0:31:84.29:0,84,4538	0/0:29,0:29:84.29:0,84,4364	0/0:32,0:32:84.29:0,84,4567	0/0:31,0:31:87.27:0,87,4293	1/1:6,23:29:60.21:2406,60,0	0/0:43,0:43:99:0,123,6257	0/0:20,0:20:57.17:0,57,2836	0/0:25,0:25:75.26:0,75,3812	0/0:25,0:25:75.26:0,75,3972	0/0:32,0:32:90.31:0,90,4769	0/0:30,0:30:90.30:0,90,4545	0/0:23,0:23:66.70:0,67,3336	0/0:29,0:29:81.24:0,81,3816	0/0:31,0:31:87.30:0,87,4590	0/0:25,0:25:75.19:0,75,3710	0/0:26,0:26:75.26:0,75,3984	0/0:10,0:10:30.10:0,30,1671
chr10	54900153	.	A	AC	27121.06	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-12.204;DP=737;FS=0.000;HRun=1;HaplotypeScore=78.4768;InbreedingCoeff=0.9782;MQ=83.35;MQ0=0;MQRankSum=-3.339;QD=40.78;ReadPosRankSum=4.079;VQSLOD=5.1868;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,35:35:93.32:1394,93,0	0/0:7,0:7:15.54:0,16,49	0/0:22,0:22:58.29:0,58,674	0/0:20,0:20:54.16:0,54,672	1/1:1,32:33:93.18:1339,93,0	1/1:0,27:27:72.24:1068,72,0	1/1:1,19:20:51.17:764,51,0	1/1:0,36:36:99:1617,108,0	1/1:4,26:30:72.24:1079,72,0	1/1:2,24:26:72.24:1079,72,0	1/1:1,25:26:75.25:1109,75,0	1/1:1,30:31:81.27:1207,81,0	1/1:0,29:29:81.27:1213,81,0	1/1:0,30:30:81.27:1214,81,0	1/1:1,31:32:81.27:1214,81,0	0/0:23,0:23:8.70:0,9,76	1/1:0,38:38:99:1663,111,0	1/1:0,19:19:54.18:804,54,0	1/1:0,25:25:75.24:1104,75,0	1/1:1,27:28:78.22:1144,78,0	1/1:4,31:35:90.27:1305,90,0	1/1:1,29:30:87.21:1276,87,0	1/1:0,23:23:60.04:899,60,0	1/1:1,23:24:63.21:944,63,0	1/1:1,27:28:78.26:1169,78,0	1/1:1,23:24:66.22:989,66,0	1/1:1,25:26:72.24:1079,72,0	1/1:0,10:10:30.10:450,30,0
chr10	54901769	.	G	GA	1806.63	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-7.022;DP=470;FS=1.748;HRun=8;HaplotypeScore=44.2447;InbreedingCoeff=0.9414;MQ=68.63;MQ0=0;MQRankSum=-0.976;QD=22.03;ReadPosRankSum=-0.100;VQSLOD=3.4987;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:51:0,51,461	0/0:4,0:4:12.01:0,12,110	0/0:8,0:7:8.03:0,8,77	0/0:6,0:6:6:0,6,55	0/0:30,0:30:81.03:0,81,741	0/0:17,0:17:47.98:0,48,431	0/0:14,0:14:36.02:0,36,329	0/0:31,0:31:63.01:0,63,573	0/0:16,0:16:39.01:0,39,357	0/0:15,0:15:36.02:0,36,330	0/0:19,0:19:57.01:0,57,516	0/0:12,0:12:36.02:0,36,329	0/0:16,0:16:42.02:0,42,384	0/0:17,0:17:42.02:0,42,384	0/0:21,0:21:60.03:0,60,549	0/0:14,0:14:42.02:0,42,384	0/0:29,0:29:75.03:0,75,686	0/0:11,0:11:30.01:0,30,275	1/1:4,16:20:48.14:554,48,0	1/1:9,19:28:54.12:608,54,0	1/1:2,6:8:18.05:208,18,0	0/0:15,0:15:42.02:0,42,384	0/0:22,0:22:54.02:0,54,494	0/0:10,0:10:23.99:0,24,214	0/0:13,0:13:35.98:0,36,322	0/0:13,0:13:39.02:0,39,357	1/1:4,21:26:53.99:596,54,0	0/0:15,0:15:45.02:0,45,412
chr10	54902390	.	AC	A	11004.98	PASS	AB=0.786;AC=54;AF=0.964;AN=56;BaseQRankSum=5.437;DP=547;FS=1.423;HRun=1;HaplotypeScore=363.5026;InbreedingCoeff=-0.0433;MQ=43.29;MQ0=0;MQRankSum=-3.849;QD=20.12;ReadPosRankSum=5.517;VQSLOD=3.5275;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,31:32:68.58:515,69,0	0/1:1,3:4:8.98:60,0,9	1/1:2,0:2:5.87:39,6,0	0/1:6,0:6:20.12:84,0,20	1/1:0,15:15:41.79:316,42,0	1/1:1,20:21:37.87:437,38,0	1/1:3,24:27:77.56:582,78,0	1/1:5,16:21:26.64:357,27,0	1/1:1,24:25:74.72:583,75,0	1/1:5,14:19:39.48:316,39,0	1/1:2,4:6:14.79:105,15,0	1/1:1,33:34:97.24:751,97,0	1/1:0,33:33:98.58:768,99,0	1/1:3,27:30:65.44:630,65,0	1/1:0,29:29:86.71:685,87,0	1/1:2,27:29:79.40:616,79,0	1/1:0,23:23:66.62:507,67,0	1/1:0,11:11:32.82:245,33,0	1/1:5,24:29:23.14:479,23,0	1/1:3,7:10:26.67:212,27,0	1/1:1,17:18:38.34:274,38,0	1/1:4,14:18:44.81:343,45,0	1/1:2,14:16:44.80:340,45,0	1/1:0,25:25:45.64:337,46,0	1/1:0,15:15:41.73:307,42,0	1/1:2,18:20:59.01:450,59,0	1/1:0,27:27:80.68:624,81,0	1/1:0,2:2:5.97:44,6,0
chr10	54903793	.	ATATGGACTGAGAATATCAGACTCC	A	3843.52	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=8.221;DP=687;FS=0.768;HRun=0;HaplotypeScore=397.5878;InbreedingCoeff=0.9621;MQ=81.76;MQ0=0;MQRankSum=-5.744;QD=45.76;ReadPosRankSum=1.044;VQSLOD=1.1753;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,108,9891	0/0:9,0:9:24.08:0,24,2383	0/0:21,0:21:28.34:0,28,1183	0/0:20,0:20:30.10:0,30,1632	0/0:23,0:23:54.17:0,54,4601	0/0:42,0:42:99:0,111,10258	0/0:21,0:21:48.16:0,48,3992	0/0:35,0:35:66.22:0,66,4568	0/0:21,0:21:54.17:0,54,4879	0/0:34,0:34:72.25:0,72,6998	0/0:15,0:15:45.14:0,45,3506	0/0:22,0:22:63.20:0,63,5474	0/0:23,0:23:54.19:0,54,4704	0/0:21,0:21:54.19:0,54,5072	0/0:29,0:29:84.27:0,84,7679	0/0:22,0:22:60.21:0,60,5895	0/0:29,0:29:78.25:0,78,6497	0/0:19,0:19:48.12:0,48,4038	1/1:5,5:10:15.02:476,15,0	1/1:4,10:14:18.06:1009,18,0	1/1:14,10:24:6.02:91,6,0	0/0:30,0:30:69.23:0,69,5680	0/0:25,0:25:57.20:0,57,5438	0/0:29,0:29:63.20:0,63,5671	0/0:22,0:22:63.22:0,63,5697	0/0:32,0:32:66.22:0,66,6157	1/1:12,24:36:36.12:2268,36,0	0/0:12,0:12:33.11:0,33,3552
chr10	54904401	.	G	GT	25824.85	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-8.958;DP=710;FS=7.109;HRun=2;HaplotypeScore=66.9297;InbreedingCoeff=0.9988;MQ=91.61;MQ0=0;MQRankSum=-12.064;QD=39.79;ReadPosRankSum=7.266;VQSLOD=4.1346;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:1,23:24:69.23:992,69,0	1/1:1,10:11:30.10:432,30,0	0/0:30,0:30:78.05:0,78,907	0/0:31,0:31:81.18:0,81,958	1/1:1,31:32:93.27:1313,93,0	1/1:0,33:33:93.31:1339,93,0	1/1:1,16:17:45.15:648,45,0	1/1:0,37:37:99:1559,111,0	1/1:0,22:22:57.19:821,57,0	1/1:0,31:31:90.30:1296,90,0	1/1:2,24:26:66.18:927,66,0	1/1:0,24:24:66.22:951,66,0	1/1:0,29:29:78.26:1123,78,0	1/1:0,23:23:57.19:821,57,0	1/1:1,35:36:96.32:1382,96,0	1/1:0,27:27:78.26:1123,78,0	1/1:0,26:26:75.25:1080,75,0	1/1:0,9:10:27.09:380,27,0	1/1:1,10:11:33.10:459,33,0	1/1:3,26:29:84.27:1189,84,0	1/1:0,25:24:69.23:993,69,0	1/1:1,19:20:54.18:778,54,0	1/1:0,23:23:63.21:908,63,0	1/1:1,34:35:99:1469,102,0	1/1:1,23:24:66.22:951,66,0	1/1:4,32:36:96.28:1337,96,0	1/1:2,26:28:78.26:1122,78,0	1/1:0,10:10:30.10:432,30,0
chr10	54904450	.	TA	T	2988.15	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=3.278;DP=681;FS=2.512;HRun=3;HaplotypeScore=114.9238;InbreedingCoeff=0.9998;MQ=90.32;MQ0=0;MQRankSum=-5.248;QD=32.13;ReadPosRankSum=-1.289;VQSLOD=2.7016;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:51.17:0,51,734	0/0:17,0:17:51.17:0,51,735	0/0:29,0:29:72.23:0,72,992	0/0:33,0:32:87.28:0,87,1206	0/0:25,0:25:72.24:0,72,1037	0/0:29,0:29:84.26:0,84,1174	0/0:19,0:19:54.18:0,54,774	0/0:29,0:28:72.24:0,72,1037	0/0:20,0:20:54.17:0,54,755	0/0:31,0:31:93.31:0,93,1336	0/0:21,0:21:63.21:0,63,907	0/0:29,0:29:81.26:0,81,1149	0/0:28,0:28:84.28:0,84,1204	0/0:21,0:21:54.18:0,54,776	0/0:32,0:32:90.30:0,90,1292	0/0:28,0:28:81.25:0,81,1132	0/0:21,0:21:63.17:0,63,884	0/0:12,0:12:36.08:0,36,495	1/1:1,16:17:51.15:621,51,0	1/1:1,35:36:99:1259,102,0	1/1:1,12:13:30.08:358,30,0	0/0:24,0:24:72.23:0,72,1019	0/0:25,0:25:72.24:0,72,1032	0/0:32,0:32:90.29:0,90,1278	0/0:19,0:19:54.18:0,54,778	0/0:31,0:31:93.31:0,93,1339	1/1:1,26:27:75.19:911,75,0	0/0:14,0:14:42.14:0,42,605
chr10	54905120	.	CGTGTGTGTGT	C	705.41	PASS	AC=4;AF=0.077;AN=52;BaseQRankSum=3.770;DP=680;FS=0.000;HRun=0;HaplotypeScore=239.5067;InbreedingCoeff=0.5404;MQ=60.30;MQ0=8;MQRankSum=-4.907;QD=17.21;ReadPosRankSum=-0.129;VQSLOD=1.7021;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:24.06:0,24,1094	1/1:11,2:13:3.01:89,3,0	0/0:28,0:21:3.01:0,3,43	./.	0/0:28,0:28:8.75:0,9,214	0/0:14,0:14:9.03:0,9,388	0/0:25,0:25:15.08:0,15,460	0/0:32,0:31:18.16:0,18,483	0/0:26,0:25:21.53:0,22,714	0/0:26,0:26:40.68:0,41,1572	0/0:16,0:16:9.03:0,9,366	0/0:18,0:21:9.06:0,9,287	0/0:28,0:28:20.62:0,21,492	0/0:20,0:20:6.02:0,6,229	0/0:18,0:22:18.52:0,19,457	1/1:19,7:27:26.90:723,27,0	0/0:18,0:19:9.49:0,9,232	0/0:20,0:19:21.07:0,21,939	0/0:19,0:19:20.76:0,21,458	0/0:19,0:25:9:0,9,137	0/0:37,0:35:27.08:0,27,530	0/0:26,0:26:6:0,6,145	./.	0/0:33,0:32:9.46:0,9,223	0/0:22,0:22:15.05:0,15,560	0/0:25,0:24:24.08:0,24,1003	0/0:22,0:30:18.90:0,19,745	0/0:11,0:11:3.01:0,3,71
chr10	54906492	.	GTC	G	427.46	PASS	AB=0.787;AC=24;AF=0.522;AN=46;BaseQRankSum=0.836;DP=275;FS=20.847;HRun=0;HaplotypeScore=73.1675;InbreedingCoeff=0.2378;MQ=63.17;MQ0=22;MQRankSum=-0.807;QD=2.50;ReadPosRankSum=3.300;VQSLOD=0.1872;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:0,6:6:2.95:38,3,0	1/1:4,4:7:11.56:145,12,0	0/0:37,0:8:9.08:0,9,91	0/1:75,0:18:0.12:0,0,112	0/1:8,5:10:0.13:0,0,0	1/1:4,3:6:2.51:7,3,0	0/1:5,0:5:0.01:0,0,0	0/1:8,1:8:15.45:26,0,15	1/1:4,4:7:2.84:14,3,0	0/0:5,0:3:2.55:0,3,30	0/1:3,1:4:0.08:0,0,0	1/1:1,3:4:5.79:75,6,0	0/1:3,2:4:0.15:67,0,0	1/1:4,1:5:5.33:27,5,0	./.	0/0:2,5:7:0:0,0,0	0/1:4,2:6:11.98:32,0,12	1/1:0,2:2:6.02:75,6,0	0/0:6,1:4:4.83:0,5,41	0/0:2,4:6:0.47:0,0,1	./.	0/1:2,3:5:0:0,0,0	0/1:1,3:3:0:0,0,0	./.	./.	0/0:7,0:6:0:0,0,0	0/1:3,1:3:1.19:30,0,1	./.
chr10	54906510	.	CTCTCATGTCTCTG	C	942.86	PASS	AB=0.950;AC=26;AF=0.500;AN=52;BaseQRankSum=-0.324;DP=301;FS=6.536;HRun=0;HaplotypeScore=88.8984;InbreedingCoeff=0.4155;MQ=63.68;MQ0=14;MQRankSum=-1.961;QD=9.92;ReadPosRankSum=0.579;VQSLOD=0.8854;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:8,0:8:5.89:6,0,36	0/0:6,0:6:8.74:0,9,73	0/0:54,0:13:28.62:0,29,357	0/0:98,0:22:42.15:0,42,622	0/1:4,3:5:0.02:0,0,0	1/1:4,1:4:6.02:84,6,0	0/1:3,0:4:0:0,0,0	1/1:9,0:9:19.88:303,20,0	1/1:6,1:6:4.57:58,5,0	1/1:6,0:5:9.03:189,9,0	0/0:3,0:3:0.38:0,0,1	0/0:5,0:5:5.41:0,5,99	0/1:5,0:5:2.71:3,0,75	1/1:4,0:4:4.56:35,5,0	./.	0/0:8,0:8:6.26:0,6,45	0/0:3,0:3:8.39:0,8,97	0/0:2,0:2:6.02:0,6,100	0/0:5,0:4:1.57:0,2,16	0/0:7,0:7:2.96:0,3,64	./.	1/1:6,0:6:1.72:4,2,0	1/1:5,0:4:0.89:3,1,0	0/1:7,0:6:0:0,0,0	1/1:6,0:5:1.55:4,2,0	1/1:4,0:4:12.04:297,12,0	0/1:5,0:5:11.32:22,0,11	1/1:5,1:2:3.01:80,3,0
chr10	54906512	.	CTCATG	C	969.78	PASS	AB=0.943;AC=24;AF=0.462;AN=52;BaseQRankSum=0.664;DP=304;FS=11.989;HRun=0;HaplotypeScore=79.0808;InbreedingCoeff=0.3708;MQ=63.37;MQ0=13;MQRankSum=-2.535;QD=10.90;ReadPosRankSum=1.196;VQSLOD=0.8184;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:8:2.20:0,2,10	0/0:6,0:6:2.90:0,3,22	0/0:55,0:13:27.71:0,28,287	0/0:103,0:22:40.94:0,41,588	0/1:6,0:5:0:0,0,0	1/1:2,2:4:6.02:121,6,0	0/1:2,2:4:0:1,0,0	1/1:4,6:9:19.88:392,20,0	1/1:5,2:6:4.57:49,5,0	1/1:5,1:5:9.03:153,9,0	0/0:2,1:3:0.38:0,0,1	0/1:5,0:5:12.64:13,0,21	0/0:5,0:5:0.32:0,0,20	1/1:2,2:4:5.04:53,5,0	./.	0/0:8,0:8:6.14:0,6,45	0/1:3,0:3:3.91:4,0,32	0/0:2,0:2:4.40:0,4,18	0/1:4,0:4:4.33:4,0,30	0/0:7,0:7:2.36:0,2,16	./.	0/1:6,0:6:0.23:0,0,0	0/1:5,0:4:0:0,0,0	0/1:7,0:6:0:0,0,0	1/1:4,2:5:1.55:4,2,0	1/1:1,3:4:12.04:249,12,0	0/0:5,0:5:6.08:0,6,44	1/1:5,1:2:3.01:62,3,0
chr10	54906514	.	CA	C	1200.26	PASS	AB=0.613;AC=38;AF=0.760;AN=50;BaseQRankSum=0.770;DP=299;FS=44.549;HRun=1;HaplotypeScore=73.1372;InbreedingCoeff=0.5141;MQ=63.77;MQ0=14;MQRankSum=-3.322;QD=11.54;ReadPosRankSum=4.280;VQSLOD=-0.3670;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,8:8:2.96:41,3,0	1/1:0,6:6:12.04:162,12,0	0/0:59,0:13:26.05:0,26,271	0/0:105,0:22:40.24:0,40,461	0/1:4,0:5:0.08:0,0,0	1/1:4,0:4:5.83:33,6,0	0/1:2,1:3:0:0,0,0	1/1:8,1:8:16.88:87,17,0	1/1:3,0:6:4.56:35,5,0	1/1:2,0:4:8.82:90,9,0	0/0:1,0:3:1.46:0,1,4	1/1:0,5:5:12.04:165,12,0	1/1:1,4:5:13.29:169,13,0	1/1:2,0:4:5.45:39,5,0	./.	0/0:0,8:8:3.31:0,3,9	1/1:0,3:3:9.03:125,9,0	1/1:0,2:2:6.02:83,6,0	1/1:1,2:3:6.02:80,6,0	1/1:0,6:6:1.99:6,2,0	./.	0/1:0,4:6:0.01:0,0,0	0/1:0,3:3:0:0,0,0	./.	1/1:2,0:5:1.55:4,2,0	1/1:3,0:4:11.52:64,12,0	1/1:0,3:4:9.03:125,9,0	1/1:2,0:2:2.96:19,3,0
chr10	54906529	.	C	CACACA	141.05	PASS	AB=0.939;AC=16;AF=0.333;AN=48;BaseQRankSum=3.118;DP=261;FS=4.294;HRun=0;HaplotypeScore=85.6743;InbreedingCoeff=0.2998;MQ=56.80;MQ0=11;MQRankSum=0.350;QD=1.86;ReadPosRankSum=-1.258;VQSLOD=1.4395;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:7:4.98:0,5,76	0/0:7,0:7:11.99:0,12,193	0/0:31,0:6:15.02:0,15,228	0/0:69,0:19:16.46:0,16,303	./.	0/0:4,1:4:2.03:0,2,5	1/1:3,0:3:0.47:1,0,0	0/1:15,0:12:11.84:12,0,427	0/1:5,2:6:0:0,0,0	0/1:5,1:4:45.17:116,0,45	./.	0/0:5,0:5:11.80:0,12,255	0/0:5,0:5:2.81:0,3,229	1/1:3,1:4:3.01:45,3,0	./.	0/0:11,0:11:1.83:0,2,4	0/0:3,0:3:9.03:0,9,209	0/0:6,0:4:7.63:0,8,187	0/0:4,0:4:9.03:0,9,171	1/1:7,0:7:5.80:60,6,0	1/1:10,0:9:2.88:15,3,0	1/1:7,0:7:0.38:2,0,0	0/1:4,0:3:0:0,0,0	0/1:8,0:7:0:0,0,0	./.	0/0:4,0:4:12.04:0,12,218	0/1:5,0:5:4.99:5,0,160	0/0:3,0:2:3.01:0,3,58
chr10	54906580	.	T	TG	15508.92	PASS	AB=0.810;AC=55;AF=0.982;AN=56;BaseQRankSum=-2.665;DP=478;FS=0.000;HRun=0;HaplotypeScore=70.2509;InbreedingCoeff=-0.0208;MQ=60.22;MQ0=3;MQRankSum=-2.965;QD=32.45;ReadPosRankSum=2.198;VQSLOD=4.5526;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,12:12:33.11:488,33,0	1/1:0,3:3:6.02:89,6,0	1/1:6,11:14:2.06:373,2,0	0/1:13,2:12:0.38:197,0,0	1/1:0,13:13:29.97:392,30,0	1/1:1,11:12:18.06:266,18,0	1/1:1,20:21:60.20:884,60,0	1/1:1,22:23:66.15:902,66,0	1/1:0,14:14:32.97:479,33,0	1/1:7,11:18:48.02:616,48,0	1/1:0,14:14:39.04:527,39,0	1/1:0,13:14:33.11:480,33,0	1/1:0,14:14:30.10:446,30,0	1/1:0,23:23:63.21:894,63,0	1/1:0,17:16:42.14:624,42,0	1/1:1,18:19:39.13:581,39,0	1/1:0,18:18:39.13:576,39,0	1/1:0,8:8:21.07:310,21,0	1/1:0,21:21:60.09:824,60,0	1/1:0,19:19:47.14:653,47,0	1/1:2,26:28:54.11:761,54,0	1/1:0,15:15:38.70:434,39,0	1/1:0,14:14:33.49:452,33,0	1/1:0,34:34:63.07:885,63,0	1/1:1,13:14:33.11:485,33,0	1/1:0,23:23:63.17:881,63,0	1/1:0,22:22:48.16:699,48,0	1/1:2,9:11:21.07:311,21,0
chr10	54911376	.	G	GC	37727.05	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-8.284;DP=902;FS=2.053;HRun=0;HaplotypeScore=84.4144;InbreedingCoeff=0.9916;MQ=75.78;MQ0=1;MQRankSum=-9.890;QD=43.87;ReadPosRankSum=6.506;VQSLOD=4.5277;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,44:44:99:2014,126,0	1/1:1,5:6:15.05:239,15,0	0/0:26,0:25:72.24:0,72,1001	0/0:16,0:16:33.11:0,33,570	1/1:0,17:17:42.14:671,42,0	1/1:2,25:27:69.24:1103,69,0	1/1:0,40:40:99:1631,102,0	1/1:1,34:35:99:1580,102,0	1/1:0,38:38:99:1759,111,0	1/1:0,25:25:75.26:1195,75,0	1/1:0,14:14:39.13:622,39,0	1/1:1,53:54:99:2350,148,0	1/1:1,37:38:99:1727,108,0	1/1:0,47:47:99:2110,132,0	1/1:0,35:35:99:1631,102,0	1/1:0,31:31:87.30:1391,87,0	1/1:0,44:44:99:1966,123,0	1/1:1,32:33:96.33:1535,96,0	1/1:0,23:23:69.24:1095,69,0	1/1:0,13:13:36.12:576,36,0	1/1:2,83:86:99:3470,220,0	1/1:0,22:22:60.20:957,60,0	1/1:0,17:17:51.17:813,51,0	1/1:2,61:63:99:2494,157,0	1/1:0,35:35:99:1582,99,0	1/1:0,27:27:81.26:1269,81,0	1/1:1,28:29:81.28:1295,81,0	1/1:0,16:17:42.14:652,42,0
chr10	54912167	.	CCACACA	C	1307.33	PASS	AB=0.947;AC=26;AF=0.650;AN=40;BaseQRankSum=3.073;DP=551;FS=12.230;HRun=0;HaplotypeScore=103.7980;InbreedingCoeff=0.0932;MQ=65.56;MQ0=30;MQRankSum=0.137;QD=3.90;ReadPosRankSum=0.686;VQSLOD=1.4241;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:37,0:35:1.65:190,0,2	0/0:6,0:6:0:0,0,0	./.	./.	0/0:13,0:13:5.97:0,6,45	1/1:16,0:16:0.23:38,0,0	0/1:26,0:25:40.31:43,0,40	0/0:23,0:22:4.97:0,5,23	0/1:16,0:16:15.05:46,0,15	0/0:15,0:15:7.36:0,7,38	./.	1/1:12,0:12:6.49:43,6,0	1/1:13,0:13:15.05:225,15,0	1/1:18,0:18:8.76:96,9,0	0/1:19,0:19:13.96:14,0,18	1/1:18,0:17:9.03:115,9,0	1/1:15,15:31:10.58:241,11,0	1/1:8,11:20:9.03:164,9,0	./.	./.	./.	1/1:12,0:12:8.30:72,8,0	1/1:12,0:10:2.80:13,3,0	0/1:21,18:39:6.09:67,0,6	./.	0/1:22,0:21:26.49:26,0,60	1/1:24,0:23:2.27:41,2,0	./.
chr10	54912184	.	CACACACACACACACACACACACACACAT	C	260.08	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=0.173;DP=600;FS=1.766;HRun=0;HaplotypeScore=265.3536;InbreedingCoeff=0.5565;MQ=51.72;MQ0=43;MQRankSum=0.254;QD=3.72;ReadPosRankSum=-0.336;VQSLOD=2.4174;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:46:99:0,99,6151	0/0:7,0:7:3.48:0,3,96	0/0:31,0:7:12.04:0,12,307	0/0:35,0:8:6.02:0,6,125	0/0:14,0:14:21.07:0,21,885	0/0:20,0:20:25.76:0,26,1351	0/0:33,0:31:13.40:0,13,609	0/0:25,0:21:30.10:0,30,1244	0/0:16,0:16:12.98:0,13,524	0/0:17,0:16:39.13:0,39,2155	0/0:4,0:4:3.01:0,3,216	0/0:14,0:14:30.10:0,30,1729	0/0:16,0:16:20.71:0,21,1988	0/0:21,0:21:12.04:0,12,648	0/0:24,0:24:6.49:0,6,306	0/0:18,0:17:18.05:0,18,579	0/0:34,0:34:33.06:0,33,2059	0/0:20,0:20:27.02:0,27,1323	1/1:14,0:11:4.18:132,4,0	0/0:7,0:7:2.60:0,3,10	1/1:28,0:28:2.83:14,3,0	0/0:16,0:16:33.10:0,33,2048	0/0:15,0:11:15.05:0,15,1117	0/0:44,0:44:33.11:0,33,1911	0/0:10,0:10:12.04:0,12,558	0/0:30,0:28:70.24:0,70,3018	1/1:16,12:27:3.03:220,3,0	0/0:8,0:7:15.05:0,15,706
chr10	54912202	.	CACACACACAT	C	2018.72	PASS	AB=0.948;AC=27;AF=0.482;AN=56;BaseQRankSum=-2.709;DP=584;FS=14.103;HRun=0;HaplotypeScore=125.3767;InbreedingCoeff=0.2973;MQ=52.14;MQ0=41;MQRankSum=-2.095;QD=6.62;ReadPosRankSum=-4.198;VQSLOD=-0.1725;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:44:30.78:0,31,819	0/1:1,8:9:0:0,0,0	0/0:25,0:5:14.97:0,15,141	0/0:33,0:6:1.56:0,2,69	1/1:13,0:13:23.97:205,24,0	0/1:24,0:24:21.29:143,0,21	1/1:39,0:37:1.66:17,2,0	1/1:24,0:20:45.67:351,46,0	0/0:20,0:20:3.27:0,3,32	0/1:18,0:17:18.61:178,0,19	0/1:6,0:6:10.84:61,0,11	0/0:18,0:18:18.64:0,19,392	0/1:18,0:18:13.36:13,0,279	0/1:19,0:19:6.36:6,0,13	0/0:25,0:25:2.58:0,3,10	1/1:5,11:15:9.03:244,9,0	0/0:33,0:33:28.95:0,29,394	0/1:20,0:20:18.96:19,0,192	1/1:10,0:6:14.88:111,15,0	1/1:5,0:5:8.85:59,9,0	1/1:20,0:16:23.68:191,24,0	0/0:18,0:18:44.56:0,45,469	0/0:13,0:10:18.03:0,18,230	0/0:44,0:44:20.57:0,21,368	0/1:9,0:9:3.66:41,0,4	0/1:31,0:30:52.02:288,0,52	1/1:13,0:12:2.78:73,3,0	1/1:11,0:11:17.80:200,18,0
chr10	54912206	.	CACACAT	C	3897.12	PASS	AB=1.000;AC=42;AF=0.750;AN=56;BaseQRankSum=2.314;DP=584;FS=33.865;HRun=0;HaplotypeScore=96.5596;InbreedingCoeff=0.0908;MQ=53.80;MQ0=35;MQRankSum=-3.445;QD=7.47;ReadPosRankSum=-0.106;VQSLOD=0.4158;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:47,0:42:99:191,0,387	0/0:8,0:8:0:0,0,0	0/0:23,0:8:20.95:0,21,189	0/0:31,0:6:1.43:0,1,69	1/1:14,0:14:26.95:220,27,0	1/1:24,0:24:33.53:349,34,0	1/1:8,31:37:5.23:87,5,0	1/1:26,0:22:60.89:433,61,0	1/1:3,17:20:2.76:69,3,0	1/1:18,0:17:47.07:391,47,0	1/1:6,0:6:11.98:98,12,0	0/1:20,0:20:11.83:12,0,234	0/1:18,0:18:99:103,0,183	1/1:2,18:20:8.88:144,9,0	1/1:2,22:24:3.01:37,3,0	1/1:15,0:14:9.03:142,9,0	0/1:33,0:33:99:152,0,215	0/1:21,0:21:93.28:112,0,93	1/1:10,0:5:14.88:111,15,0	1/1:5,0:5:8.85:59,9,0	1/1:22,0:18:23.67:191,24,0	0/1:17,0:17:29.25:29,0,231	0/1:14,0:11:0.16:0,0,94	0/1:45,0:45:17.50:18,0,294	1/1:10,0:10:11.99:100,12,0	1/1:7,23:29:68.92:557,69,0	1/1:13,0:12:2.75:45,3,0	1/1:11,0:11:29.94:249,30,0
chr10	54914470	.	T	TATC	3700.36	PASS	AB=0.958;AC=45;AF=0.804;AN=56;BaseQRankSum=3.756;DP=323;FS=7.501;HRun=0;HaplotypeScore=63.0578;InbreedingCoeff=0.4505;MQ=67.11;MQ0=2;MQRankSum=-3.818;QD=14.45;ReadPosRankSum=1.596;VQSLOD=2.1553;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,0:12:15.30:106,15,0	0/0:5,0:5:8.99:0,9,127	0/0:26,0:22:29.11:0,29,359	0/0:22,0:18:18.47:0,18,493	0/1:5,0:5:18.81:51,0,19	1/1:8,0:8:3.01:60,3,0	1/1:7,0:6:3.01:60,3,0	1/1:16,0:15:24.04:399,24,0	1/1:15,0:15:15.05:279,15,0	1/1:11,0:11:17.87:228,18,0	1/1:3,0:3:3.01:58,3,0	1/1:16,0:16:14.76:189,15,0	1/1:11,0:11:2.99:35,3,0	1/1:2,3:5:6.02:119,6,0	1/1:5,9:13:3.01:60,3,0	0/0:14,0:13:23.91:0,24,334	1/1:13,0:13:20.88:179,21,0	0/1:11,0:11:1.08:125,0,1	0/1:6,1:7:25.07:155,0,25	1/1:13,1:13:15.05:282,15,0	1/1:9,14:23:12.04:200,12,0	1/1:14,0:14:26.98:229,27,0	1/1:10,0:10:12:109,12,0	1/1:8,0:8:12.38:88,12,0	1/1:5,3:8:3.01:60,3,0	1/1:4,5:9:15.05:279,15,0	1/1:2,9:11:18.05:330,18,0	1/1:4,0:4:2.97:20,3,0
chr10	54914488	.	C	CATCATCATC	3868.13	PASS	AB=1.000;AC=45;AF=0.804;AN=56;BaseQRankSum=3.364;DP=281;FS=10.963;HRun=0;HaplotypeScore=77.5673;InbreedingCoeff=0.4816;MQ=54.11;MQ0=18;MQRankSum=-2.909;QD=17.42;ReadPosRankSum=2.096;VQSLOD=0.7544;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,0:8:18.91:291,19,0	0/0:5,0:5:8.89:0,9,143	0/0:20,0:16:23.23:0,23,516	0/0:19,0:16:28.95:0,29,629	0/1:3,0:3:0.76:1,0,20	1/1:5,0:5:2.37:8,2,0	1/1:10,0:6:2.24:8,2,0	1/1:17,0:13:16.73:137,17,0	1/1:15,0:15:14.91:64,15,0	1/1:7,0:7:15.96:103,16,0	1/1:4,0:4:2.74:12,3,0	1/1:10,0:10:26.66:515,27,0	1/1:1,4:7:3.01:108,3,0	1/1:5,0:4:6.02:124,6,0	1/1:11,0:10:3.01:57,3,0	0/0:15,0:13:22.28:0,22,434	0/1:10,0:10:29.47:402,0,29	0/1:10,0:10:1.08:322,0,1	1/1:5,0:5:1.20:32,1,0	1/1:10,0:8:13.75:83,14,0	1/1:24,0:22:9.18:85,9,0	1/1:11,0:10:27.08:590,27,0	1/1:8,0:8:9.03:200,9,0	1/1:9,0:8:15:217,15,0	1/1:7,0:6:3:26,3,0	1/1:7,0:6:14.20:181,14,0	1/1:13,0:12:18.25:284,18,0	1/1:4,0:3:2.96:19,3,0
chr10	54914490	.	TCAC	T	1000.78	PASS	AB=0.875;AC=26;AF=0.481;AN=54;BaseQRankSum=1.566;DP=274;FS=17.496;HRun=0;HaplotypeScore=61.0483;InbreedingCoeff=-0.0310;MQ=51.05;MQ0=19;MQRankSum=0.276;QD=5.82;ReadPosRankSum=1.018;VQSLOD=0.6083;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:9:4.94:0,5,23	0/0:5,0:5:8.99:0,9,148	0/0:17,0:13:29.11:0,29,470	0/0:19,0:16:24:0,24,662	0/1:3,1:4:34.60:35,0,40	0/1:3,3:5:17.98:29,0,18	0/1:8,3:7:18:29,0,18	0/1:13,5:14:99:187,0,101	0/1:3,11:14:1.06:164,0,1	1/1:1,6:7:17.87:177,18,0	1/1:1,2:3:3.01:43,3,0	0/0:11,0:11:15.62:0,16,102	0/0:6,0:6:1.95:0,2,16	1/1:5,0:4:4.07:12,4,0	0/0:10,0:9:2.25:0,2,17	0/0:15,0:13:29.45:0,29,445	0/1:10,0:10:14.38:14,0,28	0/1:9,0:10:9.54:10,0,54	0/1:5,0:5:23.21:23,0,103	1/1:4,6:8:15.04:177,15,0	0/1:20,0:18:3.91:4,0,45	0/1:10,0:9:17.92:23,0,18	./.	1/1:9,0:8:2.80:22,3,0	1/1:6,0:5:2.22:7,2,0	0/1:7,0:6:44.65:97,0,45	0/1:13,0:12:20.06:68,0,20	1/1:1,3:3:3.01:41,3,0
chr10	54915876	.	G	GAAAA	3798.63	PASS	AB=0.981;AC=52;AF=0.929;AN=56;BaseQRankSum=-3.431;DP=487;FS=4.273;HRun=17;HaplotypeScore=83.4623;InbreedingCoeff=0.3020;MQ=49.18;MQ0=27;MQRankSum=-1.556;QD=8.05;ReadPosRankSum=0.350;VQSLOD=-0.6471;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:39,0:34:25.17:171,25,0	1/1:3,1:8:14.94:185,15,0	1/1:17,0:4:2.96:10,3,0	0/0:15,0:7:2.57:0,3,22	1/1:11,10:22:22.32:197,22,0	1/1:11,8:16:6.02:122,6,0	1/1:16,0:17:29.54:257,30,0	1/1:24,0:25:35.86:255,36,0	1/1:10,0:11:22.27:177,22,0	1/1:21,1:24:48.53:398,49,0	1/1:6,11:18:17:184,17,0	1/1:14,0:13:21.22:144,21,0	1/1:11,0:10:6.45:64,6,0	1/1:15,0:15:13.10:76,13,0	1/1:17,0:19:29.09:163,29,0	1/1:10,0:9:6.45:56,6,0	1/1:26,0:25:16.48:155,16,0	1/1:15,0:13:19.01:168,19,0	0/1:24,0:22:7.98:56,0,8	1/1:17,0:20:27.84:161,28,0	0/1:2,0:2:0:0,0,0	1/1:5,0:5:5.93:40,6,0	1/1:10,0:8:8.68:60,9,0	1/1:10,0:8:4.99:24,5,0	1/1:10,0:21:14.93:121,15,0	1/1:12,0:23:42:395,42,0	1/1:19,0:16:6.04:40,6,0	1/1:10,9:16:9.01:119,9,0
chr10	54916693	.	TA	T	1096.48	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=10.016;DP=686;FS=0.000;HRun=3;HaplotypeScore=72.9118;InbreedingCoeff=0.9975;MQ=86.77;MQ0=0;MQRankSum=-3.680;QD=30.46;ReadPosRankSum=-0.331;VQSLOD=3.1399;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,120,1643	1/1:0,10:10:30.09:358,30,0	0/0:25,0:25:69.18:0,69,932	0/0:21,0:21:52.79:0,53,680	0/0:25,0:25:72.24:0,72,1023	0/0:18,0:18:54.18:0,54,776	0/0:28,0:28:75.24:0,75,1063	0/0:23,0:23:69.22:0,69,977	0/0:27,0:27:81.26:0,81,1149	0/0:27,0:27:69.23:0,69,993	0/0:13,0:13:39.13:0,39,560	0/0:31,0:31:93.27:0,93,1285	0/0:27,0:27:78.25:0,78,1104	0/0:23,0:23:69.19:0,69,920	0/0:36,0:36:99:0,108,1501	1/1:3,23:26:73.47:860,73,0	0/0:35,0:35:96.28:0,96,1342	0/0:22,0:22:63.17:0,63,866	0/0:15,0:15:42.14:0,42,599	0/0:14,0:14:36.12:0,36,518	0/0:41,0:41:99:0,120,1698	0/0:22,0:22:63.21:0,63,906	0/0:18,0:18:54.18:0,54,777	0/0:37,0:37:99:0,108,1476	0/0:18,0:18:54.17:0,54,760	0/0:27,0:27:75.25:0,75,1063	0/0:28,0:28:81.24:0,81,1127	0/0:7,0:7:21.07:0,21,302
chr10	54917329	.	C	CAT	1821.53	PASS	AB=0.538;AC=3;AF=0.054;AN=56;BaseQRankSum=-9.196;DP=895;FS=6.082;HRun=0;HaplotypeScore=141.9146;InbreedingCoeff=0.6377;MQ=59.30;MQ0=5;MQRankSum=0.207;QD=33.73;ReadPosRankSum=3.814;VQSLOD=5.8468;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:34:64.80:0,65,831	0/1:2,12:14:11.08:437,0,11	0/0:27,0:5:6.75:0,7,47	0/0:21,0:9:20.55:0,21,267	0/0:28,0:28:75.18:0,75,959	0/0:27,0:27:78.18:0,78,985	0/0:30,0:30:81.19:0,81,1028	0/0:49,0:49:99:0,114,1475	0/0:39,0:39:99:0,111,1421	0/0:43,0:42:99:0,111,1495	0/0:25,0:25:69.23:0,69,946	0/0:40,0:40:99:0,105,1375	0/0:36,0:36:99:0,105,1342	0/0:38,0:38:99:0,108,1365	0/0:49,0:49:99:0,141,1869	1/1:1,39:40:84.29:1490,84,0	0/0:33,0:33:90.09:0,90,1102	0/0:23,0:23:65.99:0,66,823	0/0:22,0:20:60.18:0,60,781	0/0:39,0:39:99:0,108,1432	0/0:33,0:33:87.24:0,87,1145	0/0:38,0:38:99:0,102,1382	0/0:29,0:29:81.24:0,81,1077	0/0:20,0:20:57.17:0,57,765	0/0:26,0:26:72.24:0,72,988	0/0:42,0:42:99:0,120,1508	0/0:37,0:37:99:0,111,1466	0/0:12,0:12:36.12:0,36,494
chr10	54920723	.	GAA	G	937.37	PASS	AB=0.581;AC=13;AF=0.232;AN=56;BaseQRankSum=-7.299;DP=343;FS=9.988;HRun=14;HaplotypeScore=77.4174;InbreedingCoeff=0.6110;MQ=58.80;MQ0=16;MQRankSum=-0.247;QD=8.15;ReadPosRankSum=2.432;VQSLOD=0.6886;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:7,2:24:19.54:20,0,68	0/0:7,0:5:2.60:0,3,10	0/0:14,0:5:9.48:0,9,93	0/0:10,0:5:1.29:0,1,54	0/0:13,0:11:25.20:0,25,184	0/0:13,0:10:11.77:0,12,141	0/0:8,0:5:10.52:0,11,75	0/0:23,0:23:42.56:0,43,321	0/0:4,0:3:8.54:0,9,52	0/0:11,0:7:11.77:0,12,70	0/0:5,0:5:5.08:0,5,51	1/1:6,3:9:5.91:55,6,0	1/1:1,8:8:21.01:189,21,0	0/0:7,0:5:8.50:0,8,71	0/0:2,0:1:2.98:0,3,22	0/0:2,0:2:5.19:0,5,20	1/1:8,21:28:53.72:481,54,0	1/1:6,3:29:17.95:195,18,0	0/0:12,0:11:21.87:0,22,134	0/0:6,0:5:5.99:0,6,52	0/0:6,0:5:8.86:0,9,52	0/0:4,0:3:2.22:0,2,7	1/1:3,1:4:2.95:28,3,0	1/1:2,6:7:14.67:138,15,0	0/0:21,0:16:45.62:0,46,307	0/0:20,0:15:32.27:0,32,200	0/0:20,0:18:46.68:0,47,329	0/0:18,0:13:26.36:0,26,206
chr10	54920735	.	A	AT	1300.76	PASS	AB=1.000;AC=32;AF=0.571;AN=56;BaseQRankSum=-0.228;DP=357;FS=11.018;HRun=0;HaplotypeScore=77.1745;InbreedingCoeff=0.6651;MQ=64.85;MQ0=9;MQRankSum=3.817;QD=6.41;ReadPosRankSum=-1.311;VQSLOD=2.3855;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:25:44.87:0,45,338	1/1:2,1:2:6:53,6,0	0/0:18,0:8:10.27:0,10,98	0/0:14,0:7:14.45:0,14,120	1/1:11,0:10:4.36:28,4,0	1/1:10,0:9:8.21:24,8,0	1/1:7,0:7:7.92:65,8,0	1/1:26,0:26:26.89:222,27,0	1/1:3,1:3:4.36:31,4,0	1/1:11,0:9:16.49:102,16,0	0/1:5,0:5:2.82:41,0,3	0/0:8,0:8:14.66:0,15,103	0/0:12,0:12:9.40:0,9,168	1/1:7,0:6:4.79:49,5,0	1/1:4,0:4:9.46:75,9,0	1/1:1,2:3:9:82,9,0	0/0:34,0:33:14.83:0,15,348	0/0:27,0:26:50.46:0,50,272	1/1:19,0:18:25.17:168,25,0	0/0:3,0:2:1.14:0,1,5	1/1:9,0:8:1.87:42,2,0	0/0:2,0:2:5.22:0,5,35	0/0:2,0:2:5.82:0,6,35	0/0:8,0:8:17.21:0,17,97	1/1:22,0:20:29.44:175,29,0	1/1:20,0:16:20.15:159,20,0	1/1:20,0:19:17.32:95,17,0	0/1:22,0:18:10.16:85,0,10
chr10	54924798	.	TATACACAC	T	7662.75	PASS	AB=0.919;AC=28;AF=0.500;AN=56;BaseQRankSum=6.244;DP=494;FS=0.436;HRun=0;HaplotypeScore=144.1150;InbreedingCoeff=0.5540;MQ=57.61;MQ0=7;MQRankSum=-3.057;QD=26.06;ReadPosRankSum=1.724;VQSLOD=4.4234;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:20:24.05:0,24,621	0/1:10,0:10:99:120,0,135	0/0:20,0:14:32.17:0,32,499	0/0:22,0:18:37.15:0,37,680	1/1:1,17:18:14.96:248,15,0	1/1:1,20:21:33.11:949,33,0	1/1:1,15:17:9.02:189,9,0	1/1:23,0:22:65.79:542,66,0	1/1:0,13:13:24.08:692,24,0	1/1:0,26:26:70.88:915,71,0	1/1:1,17:19:10.28:211,10,0	0/0:20,0:20:32.77:0,33,372	0/0:13,0:13:26.44:0,26,380	1/1:0,17:19:27.09:738,27,0	1/1:9,6:15:38.41:676,38,0	0/1:11,0:11:57.24:57,0,171	0/0:19,0:19:23.78:0,24,262	0/0:11,0:11:26.96:0,27,594	0/1:19,0:18:83.24:83,0,292	0/1:23,0:23:75.83:364,0,76	0/0:23,0:23:29.91:0,30,239	0/0:17,0:17:24.03:0,24,450	0/0:12,0:12:20.82:0,21,331	0/0:21,0:20:24:0,24,414	0/1:1,16:18:8.16:802,0,8	1/1:0,18:19:56.10:620,56,0	0/1:18,0:18:99:217,0,138	1/1:0,4:5:9.03:240,9,0
chr10	54924800	.	T	TACACACACAC	2312.73	PASS	AB=1.000;AC=20;AF=0.385;AN=52;BaseQRankSum=-5.685;DP=537;FS=0.872;HRun=0;HaplotypeScore=210.4146;InbreedingCoeff=0.7086;MQ=55.40;MQ0=9;MQRankSum=1.292;QD=10.46;ReadPosRankSum=-3.422;VQSLOD=2.2059;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:27,3:29:12.51:475,13,0	0/1:12,0:12:0:0,0,0	./.	./.	0/0:17,0:18:6.02:0,6,139	0/0:21,0:21:31.66:0,32,670	0/0:17,0:17:6.02:0,6,116	0/1:24,0:23:0:0,0,0	0/0:13,0:13:24.08:0,24,556	0/0:28,0:28:14.93:0,15,375	0/0:18,0:18:6.91:0,7,141	1/1:18,0:23:3.01:67,3,0	1/1:20,0:20:11.97:251,12,0	0/0:19,0:19:23.44:0,23,497	0/0:16,0:15:18.06:0,18,391	1/1:12,0:12:3.01:73,3,0	1/1:17,3:20:15.05:670,15,0	1/1:14,3:19:12.04:559,12,0	0/0:20,0:19:12.10:0,12,229	0/0:23,0:23:30.28:0,30,504	0/0:23,0:23:0.47:0,0,1	1/1:21,0:20:5.45:89,5,0	1/1:10,2:12:3.01:148,3,0	1/1:19,4:24:3.46:149,3,0	0/0:18,0:18:27.09:0,27,620	0/0:19,0:19:12.04:0,12,216	0/0:18,0:18:21.07:0,21,459	0/0:5,0:5:9.03:0,9,209
chr10	54924830	.	CACACACACACAA	C	3005.11	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=2.084;DP=608;FS=32.477;HRun=0;HaplotypeScore=223.5678;InbreedingCoeff=0.8318;MQ=56.98;MQ0=10;MQRankSum=-2.355;QD=29.75;ReadPosRankSum=1.603;VQSLOD=1.2771;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:34:50.40:0,50,1082	0/0:10,0:10:12.04:0,12,373	0/0:29,0:14:35.11:0,35,537	0/0:27,0:17:46.79:0,47,908	0/0:14,0:14:16.67:0,17,155	0/0:25,0:25:55.36:0,55,594	0/0:23,0:23:47.77:0,48,740	0/0:21,0:20:57.05:0,57,707	0/0:16,0:16:37.39:0,37,343	0/0:27,0:27:58.15:0,58,605	0/0:26,0:26:48.14:0,48,526	0/0:22,0:22:33.02:0,33,628	0/0:19,0:19:29.55:0,30,823	0/0:16,0:16:7.69:0,8,342	0/0:18,0:17:46.47:0,46,645	0/0:15,0:15:9.92:0,10,365	0/0:21,0:21:42.77:0,43,730	0/0:29,0:28:63.60:0,64,1950	1/1:2,14:16:37.54:665,38,0	1/1:6,22:28:33.11:1233,33,0	1/1:33,0:32:47.66:455,48,0	0/0:20,0:19:23.23:0,23,571	0/0:15,0:15:20.73:0,21,550	0/0:30,0:29:45.50:0,45,1036	0/0:26,0:26:36.14:0,36,595	0/0:21,0:20:47.70:0,48,586	1/1:3,12:15:20.84:801,21,0	0/1:9,0:9:13.83:14,0,133
chr10	54924841	.	A	ACACACAC	383.37	PASS	AB=1.000;AC=9;AF=0.167;AN=54;BaseQRankSum=1.940;DP=518;FS=2.513;HRun=0;HaplotypeScore=178.0013;InbreedingCoeff=-0.0141;MQ=68.68;MQ0=7;MQRankSum=-1.839;QD=2.97;ReadPosRankSum=-2.310;VQSLOD=2.5428;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:22:99:206,0,332	./.	0/0:30,0:17:42.06:0,42,485	0/0:25,0:17:39.78:0,40,477	0/0:17,0:17:30.08:0,30,422	0/0:24,0:24:69.23:0,69,1185	0/0:19,0:19:48.16:0,48,691	0/0:19,0:18:51.15:0,51,634	0/0:18,0:18:42.14:0,42,783	0/0:20,0:20:51.17:0,51,843	0/0:24,0:24:51.55:0,52,692	0/0:15,0:15:7.83:0,8,299	0/1:11,0:11:34.57:35,0,289	0/0:20,0:20:51.12:0,51,846	0/0:13,0:12:36.11:0,36,635	1/1:0,8:9:3.01:125,3,0	0/1:18,0:18:29.29:29,0,524	0/1:23,0:23:20.66:21,0,613	0/0:14,0:14:33.62:0,34,278	0/0:24,0:24:33:0,33,457	0/0:35,0:34:59.46:0,59,300	0/1:12,0:11:24.99:25,0,194	0/1:8,0:8:53.13:53,0,245	0/1:25,0:24:27.01:27,0,445	0/0:24,0:24:66.22:0,66,1136	0/0:23,0:22:48.16:0,48,750	0/0:12,0:12:21.48:0,21,349	0/0:8,0:8:21.07:0,21,362
chr10	54926648	.	T	TTC	259.71	PASS	AB=0.652;AC=11;AF=0.196;AN=56;BaseQRankSum=0.761;DP=455;FS=22.463;HRun=0;HaplotypeScore=82.1214;InbreedingCoeff=-0.0456;MQ=79.07;MQ0=2;MQRankSum=-2.869;QD=1.86;ReadPosRankSum=-1.233;VQSLOD=-0.1597;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:30:38.43:0,38,292	0/0:3,0:3:9.03:0,9,145	0/0:25,0:17:44.59:0,45,510	0/0:27,0:20:32.35:0,32,431	0/0:15,0:14:5.45:0,5,167	0/1:5,0:14:29.96:65,0,30	0/1:10,0:20:76.79:77,0,122	0/1:8,0:13:41.49:41,0,71	0/1:6,1:15:30.49:30,0,74	0/1:5,0:11:18.23:18,0,112	0/1:6,0:11:12.37:12,0,40	0/0:4,0:17:8.50:0,9,62	0/1:2,0:18:16.96:17,0,30	1/1:4,0:13:10.22:75,10,0	0/1:5,0:16:37.38:67,0,37	0/0:14,0:13:38.10:0,38,497	0/0:3,0:26:17.20:0,17,100	0/0:4,0:16:21.97:0,22,134	0/0:13,0:13:38.98:0,39,523	0/0:22,0:22:57.14:0,57,850	0/0:20,0:20:54.10:0,54,791	0/0:6,0:19:19.98:0,20,155	0/0:5,0:9:16.05:0,16,110	0/0:9,0:23:36.96:0,37,259	0/0:6,0:8:13.87:0,14,128	0/1:6,0:8:2.04:2,0,61	0/0:25,0:25:75.22:0,75,1179	0/0:3,0:3:6:0,6,51
chr10	54937647	.	TA	T	2980.60	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=6.249;DP=719;FS=4.572;HRun=2;HaplotypeScore=78.3911;InbreedingCoeff=0.9987;MQ=72.81;MQ0=0;MQRankSum=0.688;QD=33.49;ReadPosRankSum=0.596;VQSLOD=3.6539;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:57:99:0,169,2466	0/0:10,0:10:30.10:0,30,450	0/0:11,0:11:33.11:0,33,471	0/0:12,0:12:21.44:0,21,312	0/0:35,0:35:99:0,99,1480	0/0:23,0:23:66.22:0,66,989	0/0:32,0:32:96.33:0,96,1439	0/0:40,0:40:99:0,117,1700	0/0:24,0:24:69.23:0,69,1023	0/0:30,0:30:90.30:0,90,1331	0/0:19,0:19:54.17:0,54,784	0/0:42,0:42:99:0,120,1795	0/0:24,0:24:72.24:0,72,1057	0/0:27,0:27:81.27:0,81,1207	0/0:24,0:24:72.24:0,72,1079	0/0:24,0:24:69.23:0,69,1034	0/0:26,0:26:78.25:0,78,1144	0/0:25,0:25:75.21:0,75,1099	1/1:0,14:14:42.14:544,42,0	1/1:2,17:19:51.16:649,51,0	1/1:0,35:35:96.31:1247,96,0	0/0:34,0:34:99:0,102,1483	0/0:17,0:17:51.17:0,51,761	0/0:29,0:29:87.29:0,87,1301	0/0:21,0:21:62.70:0,63,907	0/0:28,0:28:84.28:0,84,1251	1/1:0,21:21:54.18:701,54,0	0/0:16,0:16:48.16:0,48,719
chr10	54938191	.	G	GCAAA	4671.33	PASS	AC=8;AF=0.148;AN=54;BaseQRankSum=-9.238;DP=716;FS=2.861;HRun=0;HaplotypeScore=119.8982;InbreedingCoeff=0.9964;MQ=81.10;MQ0=0;MQRankSum=-2.716;QD=45.35;ReadPosRankSum=-0.424;VQSLOD=4.9772;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,123,2230	0/0:7,0:7:21.07:0,21,381	0/0:22,0:22:32.27:0,32,623	0/0:18,0:18:45.15:0,45,785	0/0:23,0:23:51.17:0,51,921	0/0:19,0:19:57.20:0,57,1030	0/0:31,0:31:90.27:0,90,1569	0/0:27,0:27:78.25:0,78,1345	0/0:31,0:31:78.25:0,78,1389	0/0:29,0:29:84.29:0,84,1525	0/0:17,0:17:45.15:0,45,818	0/0:37,0:37:99:0,102,1785	0/0:30,0:30:84.27:0,84,1495	0/0:27,0:27:75.24:0,75,1334	0/0:22,0:22:57.17:0,57,977	0/0:22,0:22:60.14:0,60,971	0/0:43,0:43:99:0,123,2193	0/0:46,0:45:99:0,135,2306	1/1:9,11:20:18.12:996,18,0	1/1:7,11:20:36:729,36,0	1/1:8,30:38:66.10:1514,66,0	0/0:20,0:20:57.20:0,57,1036	0/0:12,0:12:33.11:0,33,594	0/0:36,0:36:99:0,102,1837	0/0:25,0:25:69.24:0,69,1255	0/0:21,0:21:60.20:0,60,1064	1/1:4,20:25:57.04:1433,57,0	./.
chr10	54938744	.	A	AGTGTGT	3900.56	PASS	AB=0.766;AC=49;AF=0.942;AN=52;BaseQRankSum=0.455;DP=656;FS=6.502;HRun=0;HaplotypeScore=172.8935;InbreedingCoeff=-0.0231;MQ=67.19;MQ0=5;MQRankSum=-1.550;QD=6.36;ReadPosRankSum=-2.022;VQSLOD=1.9744;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:35,9:48:0:0,0,0	1/1:11,0:11:3.01:45,3,0	./.	./.	1/1:17,0:27:6.02:77,6,0	0/1:13,0:19:48.39:97,0,48	1/1:18,0:24:9.24:116,9,0	1/1:24,0:24:12.86:109,13,0	1/1:18,0:22:3.01:39,3,0	1/1:24,0:33:33.60:405,34,0	1/1:9,0:14:2.99:38,3,0	1/1:17,4:23:3.01:96,3,0	1/1:18,3:23:5.93:190,6,0	1/1:18,0:24:5.59:72,6,0	1/1:15,0:28:9.03:115,9,0	1/1:20,0:20:15.05:346,15,0	1/1:18,0:23:12.04:220,12,0	1/1:24,0:24:12:201,12,0	1/1:12,0:12:12.01:208,12,0	1/1:20,0:19:8.75:199,9,0	1/1:38,0:34:5.97:87,6,0	1/1:11,3:15:5.91:188,6,0	1/1:21,0:21:14.45:258,14,0	1/1:24,0:34:5.10:75,5,0	0/1:13,0:19:20.96:32,0,21	1/1:20,0:28:22.62:352,23,0	1/1:24,0:23:12.51:221,13,0	1/1:6,0:12:9.03:114,9,0
chr10	54939479	.	CA	C	1004.72	PASS	AB=0.523;AC=3;AF=0.054;AN=56;BaseQRankSum=6.495;DP=811;FS=0.710;HRun=1;HaplotypeScore=77.7490;InbreedingCoeff=0.6434;MQ=86.67;MQ0=0;MQRankSum=-4.187;QD=28.71;ReadPosRankSum=0.420;VQSLOD=3.3744;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,117,1844	1/1:0,12:12:27.09:376,27,0	0/0:28,0:28:83.77:0,84,1267	0/0:28,0:28:72.61:0,73,1022	0/0:21,0:21:63.19:0,63,982	0/0:28,0:27:84.27:0,84,1320	0/0:36,0:36:99:0,108,1673	0/0:37,0:37:99:0,105,1658	0/0:25,0:25:75.22:0,75,1152	0/0:36,0:36:99:0,108,1704	0/0:14,0:14:42.14:0,42,671	0/0:38,0:38:99:0,114,1785	0/0:43,0:43:99:0,126,1989	0/0:35,0:35:99:0,105,1652	0/0:41,0:41:99:0,123,1902	0/1:2,21:23:32.73:734,0,33	0/0:32,0:32:93.32:0,93,1487	0/0:19,0:19:54.17:0,54,839	0/0:28,0:28:84.26:0,84,1317	0/0:37,0:37:99:0,108,1727	0/0:39,0:38:99:0,117,1835	0/0:19,0:19:57.19:0,57,904	0/0:22,0:22:66.21:0,66,1022	0/0:42,0:42:99:0,120,1871	0/0:25,0:25:75.21:0,75,1149	0/0:26,0:26:78.26:0,78,1225	0/0:29,0:29:87.28:0,87,1367	0/0:8,0:8:18.06:0,18,288
chr10	54940800	.	G	GA	10526.53	PASS	AB=0.605;AC=50;AF=0.893;AN=56;BaseQRankSum=-2.314;DP=699;FS=0.000;HRun=11;HaplotypeScore=104.1350;InbreedingCoeff=0.4866;MQ=75.04;MQ0=1;MQRankSum=-0.885;QD=15.66;ReadPosRankSum=-0.264;VQSLOD=4.7737;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,23:30:53.90:521,54,0	1/1:2,0:5:11.49:64,11,0	0/0:12,0:15:12.52:0,13,79	0/0:11,0:12:7.49:0,7,47	1/1:5,19:24:51.01:495,51,0	0/1:12,16:28:43.83:318,0,44	1/1:6,11:17:26.73:255,27,0	1/1:7,32:42:62.09:922,62,0	1/1:9,21:31:33.72:509,34,0	1/1:10,24:34:42.86:602,43,0	1/1:4,14:18:29.98:283,30,0	1/1:6,16:24:22.72:373,23,0	1/1:3,24:27:60.10:601,60,0	1/1:4,19:23:33.54:336,34,0	1/1:9,27:37:40.03:586,40,0	1/1:11,1:24:27.90:141,28,0	1/1:3,31:35:40.54:760,41,0	1/1:5,17:22:1.60:373,2,0	1/1:9,1:20:34.75:216,35,0	1/1:11,1:42:87.55:469,88,0	1/1:8,1:28:19.20:197,19,0	0/1:7,19:27:15.76:387,0,16	1/1:5,6:12:18.72:169,19,0	1/1:4,24:28:66.13:670,66,0	1/1:4,17:23:35.63:341,36,0	1/1:14,16:31:21.67:380,22,0	1/1:4,4:28:60.20:354,60,0	1/1:2,8:11:4.12:206,4,0
chr10	54945815	.	GA	G	1706.77	PASS	AB=0.943;AC=11;AF=0.196;AN=56;BaseQRankSum=-0.136;DP=708;FS=3.520;HRun=11;HaplotypeScore=106.1319;InbreedingCoeff=0.6836;MQ=79.00;MQ0=0;MQRankSum=-0.313;QD=9.28;ReadPosRankSum=1.542;VQSLOD=2.9914;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,105,1046	0/0:9,0:9:27.07:0,27,287	0/1:21,1:21:17.07:17,0,168	0/1:27,1:28:1.26:1,0,220	0/0:13,1:14:8.44:0,8,288	0/0:27,0:27:42.62:0,43,604	0/0:24,1:25:45.57:0,46,586	0/0:28,0:29:77.96:0,78,776	0/0:18,1:19:32.23:0,32,518	0/0:27,1:28:44.52:0,45,674	0/0:9,0:9:18.05:0,18,192	0/0:41,6:47:24.74:0,25,1068	0/0:29,1:32:50.33:0,50,696	0/0:20,0:20:51.11:0,51,530	0/1:26,3:29:4.47:4,0,540	0/0:27,2:29:19.87:0,20,609	0/0:22,3:27:6.78:0,7,463	0/0:30,0:33:83.79:0,84,823	1/1:6,20:26:65.82:529,66,0	1/1:4,14:19:14.83:303,15,0	1/1:6,26:33:70.94:572,71,0	0/0:26,2:29:16.89:0,17,589	0/0:16,0:16:39.01:0,39,391	0/0:27,0:28:71.96:0,72,726	0/0:21,2:24:28.09:0,28,460	0/0:27,1:28:47.48:0,47,683	1/1:4,23:27:53.72:443,54,0	0/0:5,0:5:12.03:0,12,128
chr10	54946157	.	TC	T	16277	PASS	AB=0.933;AC=41;AF=0.732;AN=56;BaseQRankSum=10.953;DP=693;FS=3.127;HRun=3;HaplotypeScore=70.8834;InbreedingCoeff=0.9477;MQ=87.93;MQ0=0;MQRankSum=-4.323;QD=32.42;ReadPosRankSum=4.916;VQSLOD=5.0902;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,30:31:82.14:1002,82,0	0/0:7,0:7:21.07:0,21,302	0/0:22,0:22:63.19:0,63,857	0/0:27,0:27:74.98:0,75,916	1/1:0,15:15:42.13:520,42,0	1/1:1,19:20:57.18:704,57,0	1/1:0,33:33:87.27:1079,87,0	1/1:0,31:31:90.27:1103,90,0	1/1:2,33:35:96.30:1190,96,0	1/1:1,15:16:45.14:558,45,0	1/1:0,8:8:20.98:226,21,0	1/1:1,38:39:99:1301,105,0	1/1:1,30:31:87.27:1079,87,0	1/1:2,19:21:54.17:669,54,0	1/1:1,43:44:99:1339,108,0	0/0:38,0:38:99:0,105,1512	1/1:1,37:38:99:1339,108,0	1/1:3,29:32:81.23:989,81,0	0/0:21,0:21:54.17:0,54,758	0/1:13,1:14:1.09:1,0,419	0/0:57,0:57:99:0,166,2337	1/1:1,16:17:45.14:556,45,0	1/1:1,9:10:27.08:330,27,0	1/1:0,29:29:81.25:1004,81,0	1/1:0,12:12:33.10:409,33,0	1/1:0,18:18:48.13:582,48,0	0/0:19,0:19:51.17:0,51,734	1/1:0,8:8:24.08:297,24,0
chr10	54946688	.	A	AG	881.57	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=2.672;DP=626;FS=12.033;HRun=3;HaplotypeScore=67.9713;InbreedingCoeff=0.9778;MQ=84.10;MQ0=0;MQRankSum=-3.829;QD=30.40;ReadPosRankSum=0.844;VQSLOD=2.6549;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,120,1431	1/1:1,10:11:24.08:330,24,0	0/0:22,0:22:66.19:0,66,780	0/0:19,0:19:10.65:0,11,408	0/0:14,0:14:39.12:0,39,468	0/0:29,0:29:84.26:0,84,1007	0/0:27,0:27:75.23:0,75,900	0/0:25,0:25:75.22:0,75,889	0/0:22,0:22:66.19:0,66,780	0/0:20,0:20:60.18:0,60,716	0/0:15,0:15:42.12:0,42,493	0/0:25,0:25:75.22:0,75,888	0/0:22,0:22:57.17:0,57,679	0/0:24,0:24:69.21:0,69,826	0/0:21,0:21:63.19:0,63,756	1/1:1,17:18:48.16:672,48,0	0/0:26,0:26:72.18:0,72,838	0/0:26,0:26:75.19:0,75,882	0/0:19,0:19:54.16:0,54,637	0/0:20,0:20:60.18:0,60,719	0/0:38,0:38:99:0,108,1296	0/0:19,0:19:54.17:0,54,648	0/0:12,0:12:36.11:0,36,432	0/0:39,0:39:99:0,117,1390	0/0:20,0:20:51.16:0,51,612	0/0:24,0:24:66.20:0,66,792	0/0:13,0:13:36.11:0,36,431	0/0:15,0:15:45.14:0,45,540
chr10	54947087	.	T	TA	12289.57	PASS	AB=0.559;AC=46;AF=0.821;AN=56;BaseQRankSum=-10.168;DP=664;FS=5.466;HRun=10;HaplotypeScore=63.4250;InbreedingCoeff=0.7306;MQ=73.03;MQ0=2;MQRankSum=-2.992;QD=21.49;ReadPosRankSum=3.078;VQSLOD=5.9617;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:9,30:40:7.44:551,0,7	0/0:12,0:12:29.96:0,30,246	0/0:34,0:23:33.74:0,34,268	0/0:29,0:18:20.24:0,20,196	1/1:4,20:24:54.14:574,54,0	1/1:4,23:27:60.15:640,60,0	1/1:3,10:13:2.43:231,2,0	1/1:2,29:31:84.18:879,84,0	1/1:6,14:20:14.45:359,14,0	1/1:10,22:32:35.91:547,36,0	1/1:5,19:25:47.17:532,47,0	1/1:0,16:16:39.10:416,39,0	1/1:5,14:19:36.09:384,36,0	1/1:5,16:21:36.07:374,36,0	0/1:4,16:20:1.64:371,0,2	0/0:17,0:17:46.50:0,47,373	1/1:8,43:52:71.60:1092,72,0	1/1:5,34:39:89.90:939,90,0	1/1:6,17:23:5.28:462,5,0	1/1:4,15:19:45.11:480,45,0	1/1:1,7:8:18.05:192,18,0	1/1:0,9:9:27.07:288,27,0	1/1:4,11:15:30.07:318,30,0	1/1:2,13:15:39.09:412,39,0	1/1:5,24:29:41.52:647,42,0	1/1:8,30:39:89.42:915,89,0	1/1:6,20:26:7.92:494,8,0	1/1:2,8:10:18.05:192,18,0
chr10	54947548	.	CA	C	23012.27	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-2.141;DP=653;FS=5.641;HRun=1;HaplotypeScore=67.7695;InbreedingCoeff=0.9999;MQ=86.20;MQ0=0;MQRankSum=-10.523;QD=37.91;ReadPosRankSum=6.575;VQSLOD=4.9010;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,57:57:99:2216,160,0	1/1:1,16:17:48.15:655,48,0	0/0:22,0:22:60.47:0,60,908	0/0:24,0:24:69.16:0,69,973	1/1:0,30:30:75.16:1000,75,0	1/1:0,18:18:48.16:670,48,0	1/1:0,23:23:60.20:831,60,0	1/1:0,23:23:66.11:894,66,0	1/1:0,22:22:63.21:879,63,0	1/1:0,26:26:75.15:984,75,0	1/1:0,18:18:51.17:711,51,0	1/1:0,24:24:60.20:828,60,0	1/1:0,17:17:45.15:625,45,0	1/1:0,28:28:75.25:1044,75,0	1/1:0,22:22:51.17:712,51,0	1/1:0,16:16:45.15:628,45,0	1/1:0,21:21:60.20:837,60,0	1/1:0,33:33:90.30:1256,90,0	1/1:0,18:18:54.18:752,54,0	1/1:0,14:14:42.14:585,42,0	1/1:0,22:22:57.19:795,57,0	1/1:0,22:22:63.21:878,63,0	1/1:0,15:15:38.85:543,39,0	1/1:0,27:27:75.25:1047,75,0	1/1:0,25:25:69.23:961,69,0	1/1:0,29:29:84.26:1134,84,0	1/1:0,27:27:75.25:1046,75,0	1/1:0,13:13:36.12:502,36,0
chr10	54952502	.	GA	G	15075.39	PASS	AB=0.982;AC=43;AF=0.768;AN=56;BaseQRankSum=-11.841;DP=543;FS=9.341;HRun=1;HaplotypeScore=75.0252;InbreedingCoeff=0.6968;MQ=76.96;MQ0=0;MQRankSum=-3.712;QD=33.35;ReadPosRankSum=0.969;VQSLOD=3.7733;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,29:34:99:1349,102,0	0/1:9,0:9:20.33:20,0,78	0/0:13,0:13:36.06:0,36,478	0/0:17,0:17:45.04:0,45,595	1/1:1,10:11:33.11:460,33,0	1/1:4,17:21:63.17:827,63,0	1/1:0,23:23:57.19:796,57,0	1/1:0,23:23:63.11:789,63,0	1/1:2,18:20:57.09:736,57,0	1/1:0,24:24:72.11:961,72,0	1/1:0,15:15:42.03:532,42,0	1/1:3,13:16:48.06:596,48,0	1/1:3,20:23:69.20:914,69,0	1/1:2,16:18:54.08:680,54,0	1/1:0,21:21:54.18:754,54,0	0/1:16,0:16:13.34:13,0,114	1/1:7,22:29:84.21:1073,84,0	1/1:1,30:31:81.21:1092,81,0	0/1:17,1:18:2.15:2,0,97	0/0:15,1:16:0.90:0,1,137	0/0:24,0:24:60.76:0,61,230	1/1:0,10:10:27.09:368,27,0	1/1:0,25:25:53.85:744,54,0	1/1:3,24:27:69.12:886,69,0	1/1:1,8:9:27.05:355,27,0	1/1:3,16:19:57.17:747,57,0	0/0:20,1:21:26.83:0,27,175	1/1:2,8:10:30.07:383,30,0
chr10	54952580	.	CA	C	15180.11	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=6.088;DP=538;FS=14.675;HRun=1;HaplotypeScore=61.2156;InbreedingCoeff=0.9879;MQ=83.43;MQ0=0;MQRankSum=-3.721;QD=38.53;ReadPosRankSum=2.893;VQSLOD=3.9869;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,26:26:75.25:1046,75,0	0/0:6,0:6:18.06:0,18,288	0/0:18,0:18:54.18:0,54,855	0/0:17,0:17:48.13:0,48,736	1/1:0,13:13:36.12:501,36,0	1/1:0,14:14:36.12:503,36,0	1/1:0,45:45:99:1759,126,0	1/1:0,22:22:66.21:906,66,0	1/1:1,12:13:39.13:545,39,0	1/1:0,15:15:45.15:627,45,0	1/1:0,6:6:9.03:126,9,0	1/1:0,24:24:72.24:1007,72,0	1/1:1,23:24:57.10:772,57,0	1/1:0,19:19:51.17:712,51,0	1/1:0,19:19:51.17:713,51,0	0/0:21,0:21:63.21:0,63,993	1/1:1,29:30:78.20:1069,78,0	1/1:1,21:22:63.21:880,63,0	0/0:13,0:13:39.13:0,39,624	0/0:17,0:17:39.13:0,39,619	0/0:28,0:28:81.28:0,81,1293	1/1:2,6:8:24.05:301,24,0	1/1:0,9:9:21.07:293,21,0	1/1:0,26:26:75.25:1049,75,0	1/1:1,19:20:54.15:734,54,0	1/1:0,22:22:66.22:923,66,0	0/0:24,0:24:72.25:0,72,1147	1/1:0,17:17:51.17:713,51,0
chr10	54954086	.	TAC	T	693.56	PASS	AB=0.881;AC=36;AF=0.750;AN=48;BaseQRankSum=3.584;DP=555;FS=1.343;HRun=0;HaplotypeScore=137.5493;InbreedingCoeff=0.2544;MQ=60.23;MQ0=14;MQRankSum=-2.286;QD=1.72;ReadPosRankSum=2.266;VQSLOD=2.6801;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:27,1:28:6.23:39,6,0	0/0:12,0:12:5.98:0,6,47	./.	./.	0/1:15,2:18:0.04:0,0,0	1/1:20,0:19:2.04:6,2,0	0/1:24,2:27:7.16:41,0,7	./.	0/1:15,3:18:19.75:55,0,20	1/1:20,0:20:2.22:7,2,0	1/1:6,0:6:1.25:3,1,0	1/1:17,6:25:26.89:230,27,0	1/1:14,1:16:5.85:46,6,0	1/1:15,2:17:5.95:49,6,0	0/1:16,3:22:37.34:85,0,37	0/0:35,0:34:18.01:0,18,221	1/1:18,0:19:5.82:35,6,0	1/1:9,1:10:5.93:49,6,0	1/1:10,0:16:2.84:14,3,0	1/1:10,0:12:2.84:14,3,0	./.	1/1:20,0:21:2.04:6,2,0	0/1:7,1:7:0:0,0,0	0/1:27,2:30:0:0,0,0	0/1:20,3:23:0:0,0,0	1/1:16,1:16:5.91:47,6,0	1/1:11,0:18:17.04:84,17,0	0/1:10,0:10:0.10:0,0,0
chr10	54954138	.	C	CAGAGAGAG	17971.50	PASS	AB=1.000;AC=39;AF=0.696;AN=56;BaseQRankSum=1.890;DP=610;FS=3.235;HRun=0;HaplotypeScore=200.2131;InbreedingCoeff=0.8200;MQ=52.62;MQ0=18;MQRankSum=-4.909;QD=39.85;ReadPosRankSum=1.914;VQSLOD=4.5827;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,27:37:9.03:192,9,0	0/0:7,0:7:12.04:0,12,333	0/0:26,0:12:32.78:0,33,906	0/0:33,0:21:56.90:0,57,1362	1/1:19,0:19:6.49:135,6,0	1/1:18,0:18:17.98:546,18,0	1/1:29,0:29:65.01:1528,65,0	1/1:27,0:27:72.16:1643,72,0	1/1:16,0:16:27.05:646,27,0	1/1:17,0:17:48.08:1355,48,0	1/1:12,0:12:18.52:524,19,0	1/1:33,0:33:59.12:1254,59,0	1/1:18,0:18:41.48:1082,41,0	1/1:30,0:30:47.83:1280,48,0	1/1:35,0:35:65.65:1490,66,0	0/1:27,0:26:38.71:39,0,1438	1/1:27,1:28:62.82:1559,63,0	1/1:16,0:16:41.93:1068,42,0	0/0:24,0:24:51.17:0,51,1268	0/0:13,0:13:15.02:0,15,247	0/0:32,0:32:38.87:0,39,999	1/1:8,0:8:3.01:51,3,0	0/0:8,0:7:0.14:0,0,0	1/1:34,0:34:52.53:1463,53,0	1/1:18,0:18:18.06:520,18,0	1/1:20,0:20:48.11:1183,48,0	0/0:16,0:16:39.11:0,39,797	1/1:8,0:8:23.93:413,24,0
chr10	54956573	.	G	GAT	36112.48	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=2.994;DP=895;FS=13.155;HRun=0;HaplotypeScore=153.9254;InbreedingCoeff=0.9999;MQ=81.65;MQ0=0;MQRankSum=-5.234;QD=46.42;ReadPosRankSum=2.159;VQSLOD=4.7162;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,51:55:99:2538,141,0	0/0:13,0:13:36.09:0,36,484	0/0:27,0:27:71.42:0,71,926	0/0:20,0:20:47.33:0,47,607	1/1:3,23:27:63.22:1134,63,0	1/1:2,16:18:45.15:810,45,0	1/1:4,23:27:63.22:1134,63,0	1/1:3,37:41:99:1998,114,0	1/1:5,37:43:99:1837,102,0	1/1:2,34:37:99:1848,105,0	1/1:0,19:19:51.17:917,51,0	1/1:2,44:46:99:2161,120,0	1/1:2,32:36:93.27:1652,93,0	1/1:2,28:31:69.24:1242,69,0	1/1:1,56:57:99:2863,160,0	0/0:57,0:57:99:0,166,2293	1/1:0,33:34:87.30:1566,87,0	1/1:0,17:17:48.16:863,48,0	1/1:3,24:28:75.21:1250,75,0	1/1:1,32:34:90.31:1614,90,0	1/1:1,36:37:96.33:1725,96,0	1/1:1,23:24:66.23:1188,66,0	1/1:2,17:19:48.16:864,48,0	1/1:1,31:32:72.24:1297,72,0	1/1:0,22:23:60.21:1080,60,0	1/1:4,32:36:99:1776,99,0	1/1:2,39:40:99:1891,105,0	1/1:0,16:16:48.16:864,48,0
chr10	54957124	.	CA	C	4455	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=10.021;DP=710;FS=9.378;HRun=1;HaplotypeScore=71.4842;InbreedingCoeff=0.9999;MQ=83.97;MQ0=0;MQRankSum=-2.747;QD=38.74;ReadPosRankSum=1.862;VQSLOD=5.1951;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,144,2228	0/0:20,0:20:57.18:0,57,886	0/0:23,0:23:55.98:0,56,749	0/0:22,0:22:61.73:0,62,912	0/0:24,0:24:72.25:0,72,1148	0/0:16,0:16:48.13:0,48,715	0/0:20,0:20:60.19:0,60,931	0/0:36,0:36:99:0,108,1560	0/0:24,0:24:72.19:0,72,1054	0/0:27,0:27:81.23:0,81,1267	0/0:19,0:19:57.18:0,57,887	0/0:27,0:27:81.25:0,81,1248	0/0:32,0:32:96.31:0,96,1502	0/0:29,0:29:87.25:0,87,1315	0/0:31,0:31:93.26:0,93,1394	0/0:22,0:22:66.20:0,66,1005	0/0:32,0:32:96.23:0,96,1432	0/0:27,0:27:81.25:0,81,1246	1/1:0,29:29:84.28:1170,84,0	1/1:0,25:25:72.24:1002,72,0	1/1:0,29:29:72.24:1004,72,0	0/0:24,0:24:72.17:0,72,1013	0/0:14,0:14:42.09:0,42,596	0/0:32,0:32:96.31:0,96,1507	0/0:11,0:11:33.10:0,33,503	0/0:20,0:20:60.20:0,60,938	1/1:0,32:32:93.31:1279,93,0	0/0:15,0:15:45.15:0,45,718
chr10	54958252	.	AGG	A	12865.77	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-8.477;DP=640;FS=0.473;HRun=10;HaplotypeScore=92.6712;InbreedingCoeff=0.9834;MQ=74.13;MQ0=3;MQRankSum=-1.775;QD=25.89;ReadPosRankSum=4.532;VQSLOD=4.8387;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,32:33:84.22:936,84,0	0/0:1,0:5:9.86:0,10,36	0/0:12,0:14:17.49:0,17,176	0/0:11,0:11:18:0,18,205	1/1:6,20:27:42.03:526,42,0	1/1:1,23:23:66.18:735,66,0	1/1:6,26:32:69.17:769,69,0	1/1:1,16:17:42.09:459,42,0	1/1:4,15:19:42.10:468,42,0	1/1:2,13:15:39.10:434,39,0	1/1:2,13:14:39.06:421,39,0	1/1:0,30:30:81.22:903,81,0	1/1:5,30:34:71.94:803,72,0	1/1:5,31:36:78.20:869,78,0	1/1:3,26:29:69.18:769,69,0	0/0:5,1:26:19.37:0,19,138	1/1:5,27:33:69.09:828,69,0	1/1:3,24:28:71.47:801,71,0	0/0:2,0:8:21.04:0,21,214	0/0:16,0:21:21.51:0,22,235	0/0:25,0:42:39.07:0,39,425	1/1:0,17:17:41.82:468,42,0	1/1:1,9:10:18.04:201,18,0	1/1:2,34:36:87.17:970,87,0	1/1:4,18:22:48.11:535,48,0	1/1:8,24:32:69.14:769,69,0	0/0:7,0:15:23.55:0,24,283	1/1:0,7:7:18.05:201,18,0
chr10	54959766	.	G	GGC	2783.59	PASS	AB=0.929;AC=41;AF=0.932;AN=44;BaseQRankSum=-4.598;DP=102;FS=53.311;HRun=0;HaplotypeScore=35.5796;InbreedingCoeff=0.1576;MQ=104.09;MQ0=1;MQRankSum=-5.176;QD=29.93;ReadPosRankSum=2.486;VQSLOD=2.1651;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,6:7:18.06:233,18,0	./.	0/0:8,0:6:9.45:0,9,85	0/1:12,1:12:39.87:40,0,120	1/1:0,1:1:3.01:37,3,0	1/1:0,3:3:9.03:118,9,0	1/1:0,8:8:24.08:311,24,0	1/1:0,12:13:39.13:576,39,0	1/1:1,2:3:9.01:102,9,0	./.	./.	1/1:0,2:2:6.02:78,6,0	1/1:0,2:2:6.02:76,6,0	1/1:0,2:2:6.02:74,6,0	1/1:0,2:2:6.02:77,6,0	1/1:0,1:1:3.01:39,3,0	1/1:1,3:4:5.99:61,6,0	1/1:0,0:1:3.01:56,3,0	1/1:0,4:7:21.07:360,21,0	1/1:0,2:2:3.01:39,3,0	1/1:0,8:10:15.05:232,15,0	./.	1/1:0,0:1:3.01:60,3,0	1/1:0,5:7:14.93:197,15,0	1/1:0,1:1:3.01:39,3,0	1/1:0,2:2:6.02:83,6,0	./.	./.
chr10	54959788	.	C	CA	292.03	PASS	AB=1.000;AC=17;AF=0.567;AN=30;BaseQRankSum=0.194;DP=42;FS=4.465;HRun=0;HaplotypeScore=29.1529;InbreedingCoeff=0.4161;MQ=101.35;MQ0=0;MQRankSum=-2.524;QD=11.68;ReadPosRankSum=-0.416;VQSLOD=3.2853;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/1:5,0:3:4.44:12,0,4	0/0:5,0:4:0.63:0,1,29	./.	1/1:1,2:3:9.03:126,9,0	1/1:2,3:5:5.90:37,6,0	1/1:1,1:2:5.98:65,6,0	./.	0/1:1,0:1:0:0,0,0	./.	1/1:1,1:2:5.97:63,6,0	./.	1/1:0,1:1:3.01:32,3,0	0/0:1,0:1:2.88:0,3,15	./.	0/1:1,0:1:0:0,0,0	1/1:2,0:2:1.25:3,1,0	0/0:4,0:4:9.03:0,9,121	0/0:1,0:1:2.96:0,3,19	0/0:4,0:4:9.03:0,9,126	./.	./.	1/1:2,1:3:5.93:62,6,0	./.	./.	./.	./.
chr10	54960231	.	C	CGT	20211.07	PASS	AB=0.690;AC=50;AF=0.893;AN=56;BaseQRankSum=1.326;DP=809;FS=3.440;HRun=0;HaplotypeScore=220.3313;InbreedingCoeff=0.5782;MQ=67.05;MQ0=1;MQRankSum=-7.896;QD=27.35;ReadPosRankSum=4.500;VQSLOD=5.7149;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,24:42:74.89:1212,75,0	1/1:4,9:14:24.08:391,24,0	0/0:35,0:29:57.13:0,57,662	0/0:35,0:32:39.06:0,39,702	1/1:8,20:28:26.31:932,26,0	1/1:6,10:16:30.09:463,30,0	1/1:17,19:36:69.20:1067,69,0	1/1:24,6:31:45.02:637,45,0	1/1:6,17:24:57.15:884,57,0	1/1:13,20:33:69.23:1112,69,0	1/1:5,16:21:39.13:634,39,0	1/1:10,20:30:60.20:975,60,0	1/1:10,26:36:81.28:1316,81,0	1/1:10,14:24:54.18:868,54,0	1/1:17,32:49:37.51:1628,38,0	1/1:8,25:33:72.25:1174,72,0	0/1:11,12:24:17.98:395,0,18	0/1:9,6:14:17.83:354,0,18	1/1:8,1:19:36.04:379,36,0	1/1:5,0:19:36.01:320,36,0	1/1:23,1:64:77.57:711,78,0	1/1:12,18:30:60.19:946,60,0	1/1:6,13:18:2.23:547,2,0	1/1:14,16:30:35.63:584,36,0	1/1:7,22:29:66.23:1066,66,0	1/1:16,13:29:23.17:802,23,0	1/1:10,1:36:63.01:573,63,0	1/1:1,4:5:15.05:238,15,0
chr10	54960245	.	T	TGG	9527.97	PASS	AB=0.997;AC=40;AF=0.714;AN=56;BaseQRankSum=5.546;DP=759;FS=51.011;HRun=2;HaplotypeScore=261.4692;InbreedingCoeff=-0.0810;MQ=66.21;MQ0=1;MQRankSum=-8.492;QD=13.95;ReadPosRankSum=9.493;VQSLOD=-0.1832;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:50,0:49:12.61:656,13,0	1/1:11,0:11:3.01:171,3,0	0/0:38,0:31:77.38:0,77,1029	0/0:38,0:33:87.97:0,88,1090	0/1:29,0:30:4.74:497,0,5	1/1:13,0:13:27.02:251,27,0	1/1:32,0:32:66.06:647,66,0	0/1:27,0:27:99:137,0,287	1/1:22,0:22:20.04:445,20,0	0/1:28,0:28:36.72:504,0,37	1/1:21,0:21:17.13:368,17,0	1/1:26,0:26:16.21:542,16,0	1/1:33,0:33:0.30:691,0,0	1/1:18,2:20:35.01:511,35,0	0/1:43,0:43:4.86:868,0,5	1/1:27,0:27:30.94:530,31,0	0/1:21,0:21:90.56:195,0,91	0/1:15,0:14:89.67:169,0,90	0/1:16,0:15:56.12:56,0,61	0/1:17,0:17:4.20:34,0,4	0/1:48,0:47:34.47:34,0,60	1/1:29,0:29:14.64:522,15,0	0/1:18,0:17:26.88:326,0,27	1/1:27,1:28:13.59:328,14,0	0/1:36,0:36:45.61:547,0,46	0/1:34,0:34:99:312,0,308	1/1:31,1:32:1.87:63,2,0	1/1:6,0:6:14.98:127,15,0
chr10	54960252	.	GTACAA	G	20165.33	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=5.506;DP=747;FS=6.347;HRun=0;HaplotypeScore=240.7051;InbreedingCoeff=0.9890;MQ=72.22;MQ0=0;MQRankSum=-15.314;QD=39.31;ReadPosRankSum=1.461;VQSLOD=3.5831;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,32:45:63.02:1239,63,0	0/0:12,0:12:33.11:0,33,944	0/0:47,0:40:93.20:0,93,2643	0/0:37,0:33:90.17:0,90,2234	1/1:6,22:28:45.04:887,45,0	1/1:2,11:13:24.08:493,24,0	1/1:6,24:30:42.14:866,42,0	1/1:2,25:27:75.22:1464,75,0	1/1:7,13:20:45.13:827,45,0	1/1:5,24:29:72.20:1415,72,0	1/1:2,18:20:33.11:680,33,0	1/1:5,22:27:60.19:1194,60,0	1/1:5,28:33:78.25:1567,78,0	1/1:5,16:21:42.14:865,42,0	1/1:7,33:40:87.26:1737,87,0	0/0:30,0:30:84.27:0,84,2514	1/1:4,15:19:34.31:701,34,0	1/1:4,10:14:21.07:429,21,0	0/0:15,0:15:39.12:0,39,1131	0/0:15,0:15:39.13:0,39,1158	0/0:46,0:46:99:0,108,3176	1/1:6,23:29:50.90:1041,51,0	1/1:4,15:18:36.12:735,36,0	1/1:7,18:25:27.01:474,27,0	1/1:4,30:34:75.26:1518,75,0	1/1:2,32:34:93.29:1877,93,0	0/0:31,0:31:63.17:0,63,1863	1/1:1,4:5:9.03:157,9,0
chr10	54962121	.	A	AAACAACAACAAC	10599.91	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=4.039;DP=701;FS=2.056;HRun=0;HaplotypeScore=205.2136;InbreedingCoeff=0.9070;MQ=58.17;MQ0=4;MQRankSum=-5.660;QD=17.24;ReadPosRankSum=0.502;VQSLOD=3.9840;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:6,0:23:18.04:305,18,0	0/0:10,0:10:24.08:0,24,792	0/0:23,0:14:12.47:0,12,243	0/0:27,0:23:24.07:0,24,485	1/1:7,0:26:35.94:577,36,0	1/1:4,0:24:18.06:220,18,0	1/1:8,0:38:5.46:139,5,0	1/1:18,0:29:39.13:361,39,0	1/1:9,0:30:36.10:492,36,0	1/1:8,0:44:98.62:1173,99,0	1/1:6,0:21:32.98:465,33,0	1/1:6,0:29:42.13:513,42,0	1/1:5,0:27:51.16:625,51,0	1/1:6,0:20:12.10:233,12,0	1/1:7,0:29:27.08:395,27,0	0/0:25,0:25:63.22:0,63,2081	1/1:5,0:14:17.02:188,17,0	1/1:10,0:21:14.08:186,14,0	1/1:17,0:23:26.97:382,27,0	1/1:4,16:26:27.09:925,27,0	1/1:5,0:7:9.03:365,9,0	1/1:3,0:27:40.19:591,40,0	1/1:4,0:30:35.21:529,35,0	1/1:9,0:23:21.07:325,21,0	1/1:1,0:21:15.05:250,15,0	1/1:10,0:36:65.26:618,65,0	1/1:5,19:30:10.27:603,10,0	1/1:2,0:14:26.93:139,27,0
chr10	54962328	.	A	AC	52.53	PASS	AB=1.000;AC=7;AF=0.500;AN=14;BaseQRankSum=3.095;DP=65;FS=4.410;HRun=2;HaplotypeScore=29.4114;MQ=43.15;MQ0=23;MQRankSum=-1.158;QD=3.09;ReadPosRankSum=2.339;VQSLOD=-0.0241;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	0/0:8,0:8:15.87:0,16,101	0/0:5,0:3:8.86:0,9,68	0/1:6,0:3:3.31:21,0,3	./.	./.	./.	1/1:0,2:2:6.01:59,6,0	./.	./.	./.	./.	./.	./.	./.	0/0:16,0:16:40.48:0,40,266	1/1:4,2:2:5.91:46,6,0	./.	1/1:3,0:1:2.92:17,3,0	./.	./.	./.	./.	./.	./.	./.	./.	./.
chr10	54962343	.	AG	A	3584.42	PASS	AB=0.967;AC=46;AF=0.852;AN=54;BaseQRankSum=-4.258;DP=246;FS=6.305;HRun=1;HaplotypeScore=37.2344;InbreedingCoeff=0.6555;MQ=67.97;MQ0=6;MQRankSum=-4.360;QD=16.59;ReadPosRankSum=-0.095;VQSLOD=3.2993;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:11:23.50:173,24,0	0/0:4,0:4:5.34:0,5,52	0/0:14,0:10:22.93:0,23,216	0/1:13,1:10:5.82:6,0,156	1/1:2,0:2:5.97:46,6,0	1/1:11,0:11:32.75:237,33,0	1/1:7,0:7:20.78:139,21,0	1/1:14,0:14:36.25:275,36,0	1/1:7,0:7:20.83:147,21,0	1/1:1,5:6:14.89:108,15,0	1/1:5,0:5:11.90:86,12,0	1/1:9,0:9:20.78:139,21,0	1/1:12,0:12:35.69:250,36,0	1/1:8,0:7:20.81:144,21,0	1/1:12,0:12:35.61:237,36,0	0/0:12,0:12:26.78:0,27,198	1/1:10,0:9:15.61:123,16,0	1/1:6,0:5:8.94:64,9,0	1/1:8,0:8:15.87:139,16,0	0/1:2,0:2:10.93:14,0,11	1/1:16,0:15:29.23:210,29,0	1/1:10,0:10:29.81:223,30,0	1/1:5,0:5:14.86:106,15,0	1/1:11,0:10:21.29:150,21,0	1/1:11,0:11:29.70:204,30,0	1/1:8,0:8:23.84:177,24,0	1/1:9,0:9:26.75:185,27,0	./.
chr10	54962674	.	G	GC	12000.17	PASS	AB=0.695;AC=29;AF=0.518;AN=56;BaseQRankSum=6.510;DP=672;FS=2.635;HRun=1;HaplotypeScore=192.9053;InbreedingCoeff=-0.3601;MQ=76.26;MQ0=0;MQRankSum=-7.522;QD=20.10;ReadPosRankSum=4.346;VQSLOD=5.1200;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:14,30:44:99:1042,0,302	0/0:10,0:10:20.66:0,21,252	0/0:26,0:26:72.21:0,72,903	0/0:21,0:21:56.38:0,56,687	0/1:7,13:20:99:375,0,149	0/1:11,5:16:99:182,0,308	0/1:25,11:36:99:428,0,749	0/1:33,22:55:99:1139,0,494	0/1:9,17:26:99:608,0,168	0/1:14,14:28:99:644,0,343	0/1:3,7:10:91.25:200,0,91	1/1:1,11:12:33.11:483,33,0	1/1:2,18:20:44.99:671,45,0	0/1:17,7:24:99:278,0,513	0/1:19,15:34:99:655,0,378	0/0:18,0:18:54.18:0,54,701	0/1:17,11:28:99:376,0,472	0/1:20,4:24:77.15:77,0,564	0/1:15,9:24:99:425,0,361	0/1:11,9:20:99:346,0,274	0/1:23,10:33:99:288,0,477	1/1:2,14:16:36.11:518,36,0	1/1:0,7:7:21.07:314,21,0	1/1:3,33:36:90.30:1338,90,0	0/1:5,13:18:99:528,0,104	0/1:17,11:28:99:449,0,465	0/1:17,11:28:99:410,0,506	0/1:5,5:10:89.68:228,0,90
chr10	54963304	.	CGTGT	C	1210.16	PASS	AB=0.739;AC=34;AF=0.708;AN=48;BaseQRankSum=1.892;DP=561;FS=3.495;HRun=0;HaplotypeScore=130.8539;InbreedingCoeff=0.4546;MQ=53.19;MQ0=9;MQRankSum=-0.487;QD=3.36;ReadPosRankSum=1.069;VQSLOD=2.1530;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:35,1:36:2.99:24,3,0	0/0:12,0:13:5.49:0,5,24	./.	./.	1/1:13,0:13:3:25,3,0	1/1:18,0:18:3.01:46,3,0	1/1:20,8:29:2.84:35,3,0	./.	1/1:12,7:18:12.04:185,12,0	1/1:12,3:15:6.37:135,6,0	./.	1/1:23,0:29:7.75:44,8,0	1/1:9,0:16:15.02:139,15,0	1/1:19,6:27:12.02:164,12,0	1/1:8,6:16:15.67:233,16,0	0/1:12,0:26:19.89:20,0,131	1/1:16,4:20:8.07:137,8,0	1/1:15,1:17:1.31:43,1,0	0/0:18,0:18:12.03:0,12,205	0/0:16,0:15:2.79:0,3,52	0/0:60,0:56:15.38:0,15,259	1/1:14,0:15:0.47:1,0,0	1/1:7,0:9:0.94:1,1,0	0/1:23,0:28:0.06:1,0,0	1/1:15,4:20:2.61:45,3,0	0/0:18,0:18:0.47:0,0,1	0/0:13,0:12:12.03:0,12,177	1/1:3,2:5:6.01:72,6,0
chr10	54965235	.	G	GAA	2638.64	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-3.800;DP=635;FS=8.438;HRun=10;HaplotypeScore=80.9585;InbreedingCoeff=0.9865;MQ=69.50;MQ0=0;MQRankSum=-0.199;QD=27.78;ReadPosRankSum=-1.104;VQSLOD=3.0753;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:31:68.86:0,69,754	0/0:10,0:10:27.06:0,27,275	0/0:12,0:13:14.46:0,14,176	0/0:13,0:13:18:0,18,174	0/0:40,0:42:86.80:0,87,936	0/0:21,0:21:51.11:0,51,519	0/0:25,0:26:68.88:0,69,683	0/0:31,0:31:75.09:0,75,753	0/0:18,0:19:41.73:0,42,398	0/0:27,0:27:63.11:0,63,641	0/0:19,0:19:39.03:0,39,396	0/0:17,0:17:45.06:0,45,449	0/0:31,0:31:65.76:0,66,716	0/0:28,0:30:65.60:0,66,776	0/0:24,0:25:53.81:0,54,601	0/0:23,0:24:68.89:0,69,683	0/0:17,0:17:42.08:0,42,427	0/0:21,0:23:33.86:0,34,532	1/1:10,12:24:41.09:527,41,0	1/1:9,17:27:72.21:1015,72,0	1/1:1,16:19:14.11:543,14,0	0/0:25,0:25:54.02:0,54,543	0/0:15,0:16:32.80:0,33,388	0/0:18,0:18:45.08:0,45,457	0/0:17,0:19:44.29:0,44,473	0/0:31,0:31:72.08:0,72,727	1/1:4,18:25:42.04:712,42,0	0/0:11,0:11:27.03:0,27,275
chr10	54967135	.	C	CA	11509.87	PASS	AB=0.568;AC=46;AF=0.821;AN=56;BaseQRankSum=-0.841;DP=650;FS=0.000;HRun=9;HaplotypeScore=90.8640;InbreedingCoeff=0.6385;MQ=74.16;MQ0=3;MQRankSum=-1.416;QD=20.59;ReadPosRankSum=1.075;VQSLOD=5.1223;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,27:32:66.14:716,66,0	0/0:8,0:8:20.99:0,21,182	0/0:31,0:23:19.15:0,19,242	0/0:25,0:18:5.63:0,6,77	1/1:0,16:16:45.04:471,45,0	1/1:7,16:23:25.08:506,25,0	0/1:5,21:26:11.98:564,0,12	1/1:13,11:25:10.26:295,10,0	1/1:1,14:15:27.07:299,27,0	1/1:9,20:29:14.07:601,14,0	1/1:1,20:21:34.07:591,34,0	1/1:3,18:21:42.11:464,42,0	1/1:5,14:19:33.09:365,33,0	0/1:6,15:21:6.98:385,0,7	1/1:4,23:27:45.12:497,45,0	0/0:25,0:25:63.45:0,63,548	1/1:6,35:41:91.45:985,91,0	1/1:4,20:24:48.60:532,49,0	1/1:8,12:20:14.50:403,14,0	1/1:4,17:21:1.14:413,1,0	1/1:3,15:18:10.04:339,10,0	1/1:6,15:21:14.26:362,14,0	1/1:2,21:23:22.30:473,22,0	1/1:1,26:27:34.58:605,35,0	1/1:1,19:20:10.04:339,10,0	1/1:7,18:25:28.09:536,28,0	1/1:7,22:29:32.12:511,32,0	1/1:5,10:15:3.99:260,4,0
chr10	54968057	.	G	GTTCA	2280.70	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-6.268;DP=570;FS=2.359;HRun=0;HaplotypeScore=90.5568;InbreedingCoeff=0.9946;MQ=73.28;MQ0=0;MQRankSum=-0.336;QD=65.16;ReadPosRankSum=0.348;VQSLOD=5.4082;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:75.26:0,75,1388	1/1:0,13:14:39.13:1028,39,0	0/0:15,0:15:32.47:0,32,558	0/0:7,0:7:21.07:0,21,372	0/0:34,0:34:90.29:0,90,1639	0/0:16,0:16:45.15:0,45,840	0/0:9,0:9:27.09:0,27,504	0/0:47,0:47:99:0,123,2076	0/0:14,0:14:39.13:0,39,719	0/0:23,0:23:66.22:0,66,1182	0/0:31,0:31:84.29:0,84,1551	0/0:21,0:21:57.20:0,57,1060	0/0:24,0:24:69.24:0,69,1280	0/0:14,0:14:36.12:0,36,672	0/0:23,0:23:48.16:0,48,896	1/1:1,18:21:54.14:1374,54,0	0/0:16,0:16:41.34:0,41,782	0/0:20,0:19:54.18:0,54,975	0/0:12,0:12:30.10:0,30,551	0/0:31,0:31:90.29:0,90,1649	0/0:7,0:7:21.07:0,21,392	0/0:15,0:15:45.15:0,45,837	0/0:26,0:26:63.20:0,63,1143	0/0:13,0:13:33.10:0,33,585	0/0:13,0:13:39.12:0,39,692	0/0:29,0:29:84.28:0,84,1492	0/0:29,0:29:87.30:0,87,1624	0/0:21,0:21:60.21:0,60,1116
chr10	54968174	.	C	CACATACAT	15148.21	PASS	AB=0.696;AC=37;AF=0.661;AN=56;BaseQRankSum=-5.260;DP=616;FS=6.841;HRun=0;HaplotypeScore=171.5359;InbreedingCoeff=0.8307;MQ=52.83;MQ0=1;MQRankSum=-8.857;QD=35.56;ReadPosRankSum=-1.367;VQSLOD=3.7055;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,3:22:18.53:671,19,0	0/0:2,0:8:9.03:0,9,168	0/0:24,0:15:24:0,24,274	0/0:22,0:20:27.05:0,27,374	1/1:13,27:43:29.53:1226,30,0	1/1:8,15:24:15.05:615,15,0	1/1:11,0:11:6.01:125,6,0	1/1:45,0:45:35.23:715,35,0	1/1:9,9:19:18.06:711,18,0	1/1:10,20:30:50.91:1483,51,0	1/1:6,11:17:20.09:861,20,0	1/1:8,18:26:33.11:1369,33,0	1/1:4,9:19:11.71:498,12,0	1/1:8,11:21:30.10:1239,30,0	1/1:9,14:27:15.05:615,15,0	0/0:2,0:17:27.09:0,27,503	1/1:9,7:18:9.03:366,9,0	0/1:9,6:16:5.77:119,0,6	0/0:9,0:9:12.51:0,13,309	0/0:41,0:41:96.32:0,96,2134	0/0:17,0:17:39.90:0,40,913	1/1:6,8:17:12.04:498,12,0	1/1:6,13:19:30.10:1215,30,0	0/0:9,5:17:0.47:0,0,1	1/1:5,15:21:7.13:969,7,0	1/1:7,20:28:60.08:1731,60,0	0/0:35,0:35:81.19:0,81,1636	1/1:3,0:3:9:121,9,0
chr10	54968844	.	A	AGTGT	3636.53	PASS	AB=0.631;AC=48;AF=0.923;AN=52;BaseQRankSum=-0.737;DP=492;FS=9.001;HRun=0;HaplotypeScore=124.0017;InbreedingCoeff=0.1882;MQ=61.46;MQ0=10;MQRankSum=-0.144;QD=8.40;ReadPosRankSum=1.100;VQSLOD=1.6871;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,1:21:5.61:71,6,0	1/1:4,1:4:6.02:140,6,0	1/1:26,0:17:0.47:1,0,0	0/0:25,0:15:3.01:0,3,38	./.	1/1:18,3:22:15.06:232,15,0	1/1:21,2:23:4.42:101,4,0	1/1:25,0:23:18.87:204,19,0	1/1:10,2:12:14.99:164,15,0	1/1:14,3:17:21.04:369,21,0	1/1:6,3:9:3.01:49,3,0	1/1:9,0:10:3:65,3,0	1/1:1,4:5:2.70:70,3,0	1/1:11,10:21:11.01:248,11,0	1/1:11,1:13:6:56,6,0	0/1:5,8:17:27.83:145,0,28	1/1:26,0:26:15.03:225,15,0	1/1:15,2:24:12.04:239,12,0	1/1:15,0:15:17.34:246,17,0	1/1:14,0:14:2.54:17,3,0	1/1:29,0:28:2.85:39,3,0	1/1:8,6:15:3.01:31,3,0	1/1:15,0:14:6.01:75,6,0	0/1:13,11:25:0.03:0,0,0	./.	1/1:11,3:14:24.08:474,24,0	1/1:15,0:18:15.05:262,15,0	1/1:7,0:9:6.02:113,6,0
chr10	54968890	.	C	CGCGT	592.91	PASS	AB=1.000;AC=12;AF=0.214;AN=56;BaseQRankSum=1.607;DP=401;FS=4.860;HRun=0;HaplotypeScore=129.4798;InbreedingCoeff=0.3471;MQ=68.57;MQ0=2;MQRankSum=-5.193;QD=4.21;ReadPosRankSum=-1.420;VQSLOD=1.6015;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:18.01:0,18,238	0/0:8,0:8:9.14:0,9,131	0/0:9,0:8:4.92:0,5,63	0/0:10,0:9:7.35:0,7,75	0/0:10,0:10:3:0,3,25	0/0:20,0:20:10.30:0,10,319	0/1:34,0:34:6.64:7,0,182	0/0:17,0:15:29.61:0,30,382	0/0:9,0:9:11.84:0,12,100	0/0:17,0:17:8.42:0,8,348	0/0:3,0:3:2.97:0,3,20	0/0:14,0:14:21.36:0,21,214	0/1:5,0:5:5.83:6,0,41	0/1:20,0:20:11.22:11,0,247	0/0:11,0:11:12.02:0,12,153	0/0:18,0:18:38.98:0,39,413	0/0:15,0:14:22.56:0,23,277	0/0:19,0:19:31.36:0,31,433	1/1:1,9:10:28.53:429,29,0	1/1:1,8:11:2.54:82,3,0	1/1:1,25:28:2.86:30,3,0	0/0:9,0:9:11.93:0,12,126	0/0:10,0:9:9.01:0,9,96	0/0:26,0:26:9.49:0,9,123	0/0:11,0:11:5.99:0,6,50	0/1:14,0:14:6.50:7,0,223	1/1:5,11:19:8.77:167,9,0	0/0:4,0:4:4.26:0,4,56
chr10	54968891	.	GCACT	G	2364.61	PASS	AB=0.989;AC=25;AF=0.446;AN=56;BaseQRankSum=0.867;DP=406;FS=26.083;HRun=0;HaplotypeScore=112.9488;InbreedingCoeff=-0.0499;MQ=70.75;MQ0=2;MQRankSum=-1.080;QD=8.10;ReadPosRankSum=4.506;VQSLOD=1.0412;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:21,0:21:25.85:116,0,26	0/0:9,0:9:21.07:0,21,474	0/1:9,0:9:50.10:50,0,98	0/1:11,0:10:35.31:71,0,35	0/0:10,0:10:3.37:0,3,9	0/1:19,1:20:21.50:194,0,21	1/1:32,2:34:13.87:231,14,0	1/1:17,0:15:7.49:284,7,0	0/1:8,0:8:5.71:28,0,6	0/1:18,0:18:58.08:252,0,58	1/1:3,0:3:0.89:2,1,0	1/1:14,0:14:7.20:189,7,0	0/0:6,0:6:8.66:0,9,44	0/1:19,0:19:55.27:165,0,55	0/0:11,0:11:9.66:0,10,52	0/0:17,0:17:41.73:0,42,968	1/1:16,0:15:4.56:246,5,0	0/1:18,0:18:15.58:236,0,16	0/0:10,0:10:27.09:0,27,520	0/0:11,0:11:13.19:0,13,82	0/0:28,0:28:3.01:0,3,40	0/1:9,0:9:34.08:76,0,34	1/1:10,0:9:2.81:92,3,0	0/1:27,0:27:1.65:27,0,2	0/0:6,6:12:4.53:0,5,12	0/1:14,0:14:11.77:240,0,12	0/1:19,0:19:19.38:19,0,104	0/1:4,0:4:9.45:9,0,12
chr10	54969955	.	TG	T	1543.97	PASS	AB=0.781;AC=50;AF=0.893;AN=56;BaseQRankSum=2.521;DP=320;FS=35.119;HRun=10;HaplotypeScore=86.2224;InbreedingCoeff=0.4273;MQ=75.68;MQ0=0;MQRankSum=-5.009;QD=5.23;ReadPosRankSum=3.517;VQSLOD=-0.3170;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:12,0:12:12.22:36,12,0	1/1:0,1:1:3:26,3,0	0/0:15,0:14:0.95:0,1,145	0/0:9,0:9:12.03:0,12,130	1/1:12,0:12:14.75:48,15,0	1/1:18,0:18:30.33:88,30,0	1/1:14,0:14:21.92:63,22,0	1/1:23,0:23:29.52:85,30,0	1/1:5,0:5:10.19:30,10,0	1/1:11,0:11:17.23:63,17,0	1/1:14,0:14:17.31:57,17,0	1/1:17,0:17:32.37:95,32,0	1/1:14,0:14:25.03:72,25,0	1/1:10,0:10:16.29:48,16,0	1/1:12,0:12:22.41:66,22,0	0/1:2,7:9:12.18:135,0,12	1/1:12,0:12:14.26:42,14,0	1/1:8,0:8:8.61:25,9,0	0/1:8,0:8:0.54:37,0,1	1/1:11,0:11:23.17:129,23,0	1/1:9,0:9:16.25:80,16,0	1/1:10,0:10:12.21:36,12,0	1/1:10,0:10:11.73:34,12,0	1/1:13,0:13:24.44:71,24,0	1/1:10,0:10:16.05:47,16,0	1/1:12,0:12:12.21:36,12,0	1/1:16,1:17:34.98:200,35,0	1/1:3,0:3:6.11:18,6,0
chr10	54969962	.	GGGGA	G	9621.07	PASS	AB=1.000;AC=42;AF=0.750;AN=56;BaseQRankSum=-6.911;DP=311;FS=15.412;HRun=0;HaplotypeScore=70.9287;InbreedingCoeff=0.7443;MQ=76.71;MQ0=0;MQRankSum=-6.715;QD=36.72;ReadPosRankSum=2.086;VQSLOD=3.7880;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,10:11:18.06:322,18,0	0/0:1,0:1:3.01:0,3,41	0/0:14,0:13:25.70:0,26,502	0/0:8,0:7:12.04:0,12,304	1/1:2,10:12:24.04:392,24,0	1/1:1,19:20:48.15:833,48,0	1/1:2,15:17:33.10:587,33,0	1/1:2,18:20:54.10:867,54,0	1/1:0,6:6:15.05:269,15,0	1/1:3,8:11:26.57:424,27,0	1/1:1,12:13:24.07:422,24,0	1/1:0,19:19:48.16:856,48,0	1/1:3,10:13:39.13:660,39,0	1/1:0,9:9:24.08:429,24,0	1/1:0,12:12:36.12:628,36,0	0/0:8,0:8:21.07:0,21,324	1/1:1,9:10:21.07:376,21,0	1/1:2,5:7:15.03:256,15,0	0/1:8,0:8:21:21,0,67	0/0:11,0:11:25.89:0,26,161	0/0:7,0:7:1.86:0,2,105	1/1:0,9:9:21.05:358,21,0	1/1:2,7:9:21.02:319,21,0	1/1:1,16:17:36.12:645,36,0	1/1:0,9:9:27.04:446,27,0	1/1:2,7:9:21.04:347,21,0	0/1:17,0:17:2.38:2,0,185	1/1:0,4:4:9.03:161,9,0
chr10	54969963	.	GGGA	G	4799	PASS	AB=0.963;AC=43;AF=0.768;AN=56;BaseQRankSum=0.086;DP=299;FS=14.690;HRun=0;HaplotypeScore=80.7925;InbreedingCoeff=0.6756;MQ=77.78;MQ0=0;MQRankSum=-3.974;QD=18.67;ReadPosRankSum=1.601;VQSLOD=3.1057;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,0:10:18:158,18,0	0/0:1,0:1:3:0,3,26	0/0:14,0:13:6.94:0,7,395	0/0:8,0:7:12.04:0,12,243	1/1:11,1:12:23.96:201,24,0	1/1:19,0:19:45.87:394,46,0	1/1:15,0:15:32.99:285,33,0	1/1:19,0:19:53.93:455,54,0	1/1:6,0:6:15:131,15,0	1/1:10,0:10:23.93:199,24,0	1/1:13,0:13:24:219,24,0	1/1:19,0:19:47.98:417,48,0	1/1:13,0:13:38.89:321,39,0	1/1:9,0:9:23.99:209,24,0	1/1:12,0:12:35.67:299,36,0	0/0:8,0:8:20.96:0,21,215	1/1:9,1:10:21:184,21,0	1/1:5,0:5:14.87:120,15,0	0/1:7,1:8:0.20:67,0,0	0/0:11,0:11:9.21:0,9,31	0/1:7,0:7:4.01:4,0,22	1/1:9,0:9:20.48:166,20,0	1/1:8,0:8:20.89:167,21,0	1/1:16,1:17:36:316,36,0	1/1:9,0:9:23.99:208,24,0	1/1:7,0:7:21:182,21,0	0/1:16,0:16:17.85:18,0,28	1/1:4,0:4:9:79,9,0
chr10	54969964	.	GGAGA	G	5913.73	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-1.427;DP=298;FS=17.061;HRun=0;HaplotypeScore=82.4442;InbreedingCoeff=0.9253;MQ=79.19;MQ0=0;MQRankSum=-5.740;QD=26.40;ReadPosRankSum=3.699;VQSLOD=3.4411;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:10,0:10:18.04:185,18,0	0/0:1,0:1:3.01:0,3,40	0/0:14,0:13:30.80:0,31,591	0/0:9,0:8:11.70:0,12,325	1/1:11,1:12:22.31:262,22,0	1/1:19,0:19:48.07:515,48,0	1/1:15,0:15:33.07:356,33,0	1/1:18,0:18:46.84:493,47,0	1/1:6,0:6:15.03:154,15,0	1/1:10,0:10:25.29:284,25,0	1/1:12,0:12:9.08:239,9,0	1/1:19,0:19:48.11:515,48,0	1/1:10,3:13:39.10:508,39,0	1/1:9,0:9:24.03:232,24,0	1/1:12,0:12:36.07:383,36,0	0/0:8,0:8:21.04:0,21,312	1/1:10,0:10:21.05:225,21,0	1/1:5,0:5:15:154,15,0	0/0:8,0:8:11.77:0,12,138	0/0:10,0:11:26.03:0,26,218	0/0:7,0:7:17.39:0,17,149	1/1:9,0:9:20.96:221,21,0	1/1:7,1:8:18.53:235,19,0	1/1:17,0:17:36.07:370,36,0	1/1:9,0:9:24.53:291,25,0	1/1:7,0:7:17.88:204,18,0	0/0:15,0:16:34.51:0,35,311	1/1:4,0:4:9.02:88,9,0
chr10	54969965	.	GA	G	4040.61	PASS	AB=1.000;AC=50;AF=0.893;AN=56;BaseQRankSum=1.626;DP=297;FS=26.527;HRun=1;HaplotypeScore=74.3087;InbreedingCoeff=0.6989;MQ=79.37;MQ0=0;MQRankSum=-4.759;QD=14.75;ReadPosRankSum=1.716;VQSLOD=1.8745;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,0:10:17.04:86,17,0	0/1:2,0:2:4.57:5,0,18	0/0:14,0:13:9.68:0,10,241	0/0:9,0:8:11.87:0,12,163	1/1:12,0:12:22.71:117,23,0	1/1:19,0:19:45.37:228,45,0	1/1:15,0:15:31.33:159,31,0	1/1:18,0:18:51.79:293,52,0	1/1:6,0:6:14.20:72,14,0	1/1:10,0:10:24.55:121,25,0	1/1:12,0:12:22.38:109,22,0	1/1:19,0:19:45.54:230,46,0	1/1:13,0:13:35.83:169,36,0	1/1:9,0:9:22.73:114,23,0	1/1:12,0:12:34.22:177,34,0	0/1:8,0:8:1.76:2,0,35	1/1:10,0:10:19.89:100,20,0	1/1:5,0:5:14.34:78,14,0	1/1:5,2:7:17.70:179,18,0	1/1:2,8:10:27:347,27,0	1/1:3,4:7:21.01:258,21,0	1/1:9,0:9:20:105,20,0	1/1:8,0:8:19.53:98,20,0	1/1:17,0:17:34.12:172,34,0	1/1:9,0:9:25.64:132,26,0	1/1:7,0:7:20.04:111,20,0	1/1:9,7:16:41.75:536,42,0	1/1:4,0:4:8.52:43,9,0
chr10	54970001	.	CGGG	C	567.90	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-3.402;DP=307;FS=10.884;HRun=12;HaplotypeScore=82.0052;InbreedingCoeff=0.7891;MQ=71.04;MQ0=0;MQRankSum=-3.050;QD=18.32;ReadPosRankSum=-0.199;VQSLOD=1.2382;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:30.10:0,30,424	0/0:1,0:1:3.01:0,3,45	0/0:7,0:6:5.84:0,6,39	0/0:9,0:9:9.03:0,9,132	0/0:16,0:16:42.14:0,42,641	0/0:23,0:23:42.14:0,42,618	0/0:12,0:12:15.05:0,15,213	0/0:11,0:11:17.87:0,18,188	0/0:8,0:8:21.07:0,21,317	0/0:6,0:6:15.05:0,15,230	0/0:17,0:17:48.16:0,48,687	0/0:15,0:15:32.96:0,33,456	0/0:17,0:17:30.03:0,30,381	0/0:5,0:5:8.94:0,9,106	0/0:16,0:16:44.18:0,44,665	0/0:5,0:7:8.69:0,9,129	0/0:10,0:10:27.09:0,27,392	0/0:8,0:8:9.03:0,9,118	1/1:3,2:5:5.04:74,5,0	1/1:2,3:6:9.89:112,10,0	1/1:3,5:8:15.04:188,15,0	0/0:5,0:5:9.03:0,9,160	0/0:14,0:14:39.13:0,39,576	0/0:16,0:16:30.10:0,30,420	0/0:13,0:13:24.08:0,24,330	0/0:11,0:11:27.09:0,27,338	1/1:2,10:12:25.37:338,25,0	0/0:13,0:13:24.08:0,24,330
chr10	54970063	.	TAA	T	4725.11	PASS	AB=0.748;AC=40;AF=0.714;AN=56;BaseQRankSum=-1.975;DP=540;FS=9.208;HRun=16;HaplotypeScore=88.2997;InbreedingCoeff=0.6626;MQ=77.38;MQ0=0;MQRankSum=-1.440;QD=11.07;ReadPosRankSum=3.747;VQSLOD=3.4603;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,11:19:20.50:162,21,0	0/0:1,0:7:9.44:0,9,79	0/0:30,0:16:16.31:0,16,150	0/1:22,0:14:11.87:12,0,47	1/1:10,14:27:22.96:257,23,0	1/1:8,12:24:11.38:212,11,0	1/1:5,11:16:23.88:200,24,0	1/1:10,22:33:38.29:406,38,0	1/1:2,10:12:26.79:226,27,0	1/1:11,12:22:29.55:247,30,0	1/1:8,12:24:28.39:197,28,0	1/1:7,9:16:29.77:246,30,0	1/1:6,9:15:20.79:175,21,0	0/1:10,7:17:9.57:188,0,10	1/1:9,9:18:32.78:273,33,0	0/0:9,0:11:29.99:0,30,263	1/1:4,13:20:44.06:336,44,0	1/1:2,10:12:17.90:150,18,0	0/1:5,1:10:6.49:6,0,52	0/0:5,1:18:14.14:0,14,211	0/0:12,0:16:26.85:0,27,181	1/1:2,5:7:14.70:114,15,0	1/1:5,16:22:28.72:290,29,0	1/1:2,10:13:17.88:192,18,0	0/1:6,9:16:8.25:105,0,8	1/1:10,18:28:47.51:401,48,0	0/0:19,0:31:56.68:0,57,372	1/1:9,21:32:35.37:329,35,0
chr10	54970634	.	A	AATC	7125.31	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-10.458;DP=636;FS=1.778;HRun=0;HaplotypeScore=101.9922;InbreedingCoeff=0.9853;MQ=86.13;MQ0=0;MQRankSum=-3.580;QD=57.00;ReadPosRankSum=1.781;VQSLOD=7.0577;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,126,2105	0/0:14,0:14:33.11:0,33,566	0/0:15,0:16:34.98:0,35,582	0/0:28,0:28:47.45:0,47,1002	0/0:11,0:11:30.10:0,30,529	0/0:16,0:15:45.15:0,45,781	0/0:30,0:30:90.29:0,90,1555	0/0:21,0:21:60.19:0,60,1004	0/0:20,0:20:57.20:0,57,1005	0/0:26,0:26:72.25:0,72,1270	0/0:7,0:7:18.05:0,18,291	0/0:38,0:38:99:0,108,1884	0/0:28,0:28:81.28:0,81,1415	0/0:34,0:34:96.28:0,96,1626	0/0:29,0:29:75.26:0,75,1315	0/0:16,0:16:48.16:0,48,846	0/0:29,0:29:81.28:0,81,1429	0/0:28,0:28:75.18:0,75,1231	1/1:8,13:22:63.22:1405,63,0	1/1:4,11:15:36.12:809,36,0	1/1:10,58:70:99:3812,163,0	0/0:8,0:8:21:0,21,278	0/0:10,0:10:27.09:0,27,476	0/0:23,0:23:66.17:0,66,1103	0/0:8,0:8:18.06:0,18,318	0/0:20,0:20:57.19:0,57,980	1/1:2,14:17:48.16:1100,48,0	0/0:5,0:5:12.04:0,12,212
chr10	54970708	.	A	AG	16998.30	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-13.819;DP=627;FS=6.933;HRun=1;HaplotypeScore=68.3221;InbreedingCoeff=0.9895;MQ=85.75;MQ0=0;MQRankSum=-4.074;QD=39.44;ReadPosRankSum=4.399;VQSLOD=5.4124;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,33:33:84.28:1259,84,0	0/0:11,0:11:33.11:0,33,428	0/0:18,0:18:51.13:0,51,621	0/0:22,0:23:35.05:0,35,573	1/1:1,21:22:57.19:852,57,0	1/1:1,14:15:36.12:540,36,0	1/1:0,20:20:54.18:809,54,0	1/1:1,20:21:57.19:853,57,0	1/1:1,26:27:72.24:1077,72,0	1/1:1,14:15:39.12:565,39,0	1/1:1,12:13:30.10:450,30,0	1/1:1,27:28:75.25:1109,75,0	1/1:1,22:23:63.21:944,63,0	1/1:0,39:39:99:1619,108,0	1/1:1,24:25:66.22:988,66,0	0/0:22,0:22:66.20:0,66,843	1/1:0,36:36:96.33:1438,96,0	1/1:0,30:30:81.27:1214,81,0	0/0:23,0:23:60.18:0,60,755	0/0:14,0:14:39.13:0,39,506	0/0:68,0:68:99:0,178,2278	1/1:0,11:11:30.10:449,30,0	1/1:0,7:7:12.04:180,12,0	1/1:1,22:23:63.21:944,63,0	1/1:0,19:19:51.17:764,51,0	1/1:2,17:19:51.17:764,51,0	0/0:17,0:17:51.17:0,51,662	1/1:0,5:5:12.04:180,12,0
chr10	54971375	.	C	CA	19963.95	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-12.983;DP=653;FS=1.457;HRun=0;HaplotypeScore=68.2241;InbreedingCoeff=0.9880;MQ=81.04;MQ0=0;MQRankSum=-4.155;QD=42.03;ReadPosRankSum=-0.676;VQSLOD=5.1260;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,41:42:99:1811,114,0	0/0:6,0:6:18.06:0,18,250	0/0:18,0:18:48.15:0,48,652	0/0:19,0:19:54.16:0,54,716	1/1:2,21:23:42.14:659,42,0	1/1:0,31:31:75.26:1199,75,0	1/1:0,23:23:66.23:1055,66,0	1/1:0,35:35:96.33:1533,96,0	1/1:0,20:20:57.19:911,57,0	1/1:0,16:16:45.15:720,45,0	1/1:0,15:15:33.11:527,33,0	1/1:0,32:32:93.32:1486,93,0	1/1:0,30:30:84.29:1343,84,0	1/1:0,22:22:57.19:911,57,0	1/1:1,34:35:96.30:1534,96,0	0/0:26,0:26:78.22:0,78,1067	1/1:1,30:31:90.31:1433,90,0	1/1:1,15:16:39.13:623,39,0	0/0:18,0:18:48.16:0,48,665	0/0:7,0:7:20.94:0,21,265	0/0:49,0:49:99:0,132,1800	1/1:1,12:13:30.10:479,30,0	1/1:1,15:16:30.09:456,30,0	1/1:0,32:32:90.31:1438,90,0	1/1:0,17:17:48.16:767,48,0	1/1:0,22:22:63.15:935,63,0	0/0:35,0:34:99:0,105,1463	1/1:0,4:4:9.03:144,9,0
chr10	54972190	.	AGT	A	17125.28	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=17.841;DP=721;FS=2.142;HRun=0;HaplotypeScore=167.6365;InbreedingCoeff=0.9979;MQ=82.99;MQ0=0;MQRankSum=-4.807;QD=34.60;ReadPosRankSum=5.341;VQSLOD=6.4900;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,44:45:99:1675,117,0	0/0:12,0:12:36.07:0,36,608	0/0:27,0:27:69.22:0,69,1164	0/0:27,0:27:74.78:0,75,1140	1/1:2,26:28:66.22:945,66,0	1/1:1,29:30:72.24:1031,72,0	1/1:0,26:26:63.21:902,63,0	1/1:2,18:20:53.93:687,54,0	1/1:1,28:29:72.24:1029,72,0	1/1:0,20:20:57.12:791,57,0	1/1:0,17:17:36.12:514,36,0	1/1:0,23:23:63.21:902,63,0	1/1:0,23:23:57.17:815,57,0	1/1:2,33:35:87.28:1219,87,0	1/1:2,33:35:93.31:1332,93,0	0/0:31,0:31:93.29:0,93,1644	1/1:1,27:28:60.20:859,60,0	1/1:1,19:20:45.15:644,45,0	0/0:28,0:28:81.26:0,81,1425	0/0:21,0:21:57.16:0,57,977	0/0:62,0:62:99:0,184,3315	1/1:1,18:19:39.13:558,39,0	1/1:0,14:14:21.07:301,21,0	1/1:0,33:33:71.98:1031,72,0	1/1:1,15:16:39.13:559,39,0	1/1:1,26:27:75.25:1074,75,0	0/0:18,0:18:51.17:0,51,919	1/1:0,7:7:18.06:258,18,0
chr10	54972548	.	A	ATC	26358.52	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=5.730;DP=629;FS=3.266;HRun=0;HaplotypeScore=158.4531;InbreedingCoeff=0.9993;MQ=67.67;MQ0=0;MQRankSum=-10.535;QD=49.08;ReadPosRankSum=-1.410;VQSLOD=4.5212;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,23:31:81:1429,81,0	0/0:16,0:16:48.13:0,48,692	0/0:25,0:22:54.18:0,54,784	0/0:22,0:21:51.80:0,52,671	1/1:7,20:27:69.11:1160,69,0	1/1:5,22:27:75.24:1388,75,0	1/1:3,19:22:63.19:1137,63,0	1/1:9,24:33:93.23:1715,93,0	1/1:4,15:19:54.19:1036,54,0	1/1:5,25:30:90.20:1675,90,0	1/1:4,10:13:27.06:476,27,0	1/1:6,20:26:66.21:1220,66,0	1/1:7,20:27:78.25:1430,78,0	1/1:7,22:29:81.23:1440,81,0	1/1:6,19:25:72.22:1293,72,0	0/0:29,0:29:87.28:0,87,1309	1/1:8,15:23:54.06:964,54,0	1/1:3,9:12:36.12:673,36,0	1/1:4,12:16:48.16:895,48,0	1/1:4,16:20:51.17:958,51,0	1/1:3,18:21:60.21:1121,60,0	1/1:4,13:17:42.14:773,42,0	1/1:2,15:17:48.15:879,48,0	1/1:4,17:20:35.23:624,35,0	1/1:5,12:17:48.16:861,48,0	1/1:3,24:28:84.29:1604,84,0	1/1:6,18:25:63.21:1156,63,0	1/1:3,7:10:27.06:453,27,0
chr10	54972567	.	A	AAC	14636.25	PASS	AB=0.722;AC=38;AF=0.679;AN=56;BaseQRankSum=-0.997;DP=692;FS=0.000;HRun=0;HaplotypeScore=190.9905;InbreedingCoeff=0.8088;MQ=65.50;MQ0=2;MQRankSum=-5.598;QD=29.10;ReadPosRankSum=0.013;VQSLOD=5.5025;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,19:29:14.29:688,14,0	0/0:17,0:17:45.14:0,45,553	0/0:34,0:26:26.35:0,26,273	0/0:30,0:29:18.88:0,19,451	1/1:5,24:30:35.27:1029,35,0	1/1:5,20:26:14.24:744,14,0	1/1:11,15:28:42.14:684,42,0	1/1:14,24:40:78.22:1197,78,0	1/1:7,13:20:8.33:622,8,0	1/1:10,26:36:78.27:1265,78,0	1/1:6,12:18:35.71:536,36,0	1/1:10,17:28:51.17:825,51,0	1/1:3,20:24:17.24:793,17,0	1/1:7,23:30:66.23:1074,66,0	1/1:8,17:25:8.21:617,8,0	0/0:23,0:24:44.80:0,45,508	1/1:8,13:22:32.90:538,33,0	0/1:9,4:13:14.58:226,0,15	0/0:9,0:23:39.33:0,39,188	0/0:4,0:18:36.67:0,37,177	0/0:5,0:18:28.25:0,28,137	1/1:3,18:21:48.16:766,48,0	0/1:9,8:16:6.82:380,0,7	1/1:7,15:22:29.60:432,30,0	1/1:3,18:21:14.24:729,14,0	1/1:12,25:37:7.41:1112,7,0	0/0:4,0:25:53.87:0,54,264	1/1:4,10:15:24.08:380,24,0
chr10	54972726	.	CT	C	19655.07	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=3.431;DP=721;FS=3.555;HRun=1;HaplotypeScore=75.4027;InbreedingCoeff=1.0000;MQ=81.37;MQ0=0;MQRankSum=-6.039;QD=37.58;ReadPosRankSum=2.219;VQSLOD=5.5665;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,22:22:60.20:832,60,0	0/0:19,0:19:57.16:0,57,859	0/0:26,0:26:75.12:0,75,1099	0/0:19,0:18:38.61:0,39,609	1/1:0,32:32:90.08:1211,90,0	1/1:0,29:29:78.26:1083,78,0	1/1:0,23:23:51.17:712,51,0	1/1:1,30:31:92.88:1239,93,0	1/1:0,21:21:60.20:832,60,0	1/1:0,44:44:99:1816,132,0	1/1:0,26:26:75.24:1024,75,0	1/1:0,33:33:81.27:1129,81,0	1/1:0,20:20:48.16:670,48,0	1/1:0,26:26:69.23:963,69,0	1/1:0,31:31:81.27:1130,81,0	0/0:27,0:27:81.28:0,81,1289	1/1:0,24:24:63.07:879,63,0	1/1:0,23:23:60.20:835,60,0	0/0:25,0:25:72.25:0,72,1146	0/0:29,0:29:87.30:0,87,1386	0/0:27,0:27:75.25:0,75,1183	1/1:0,27:27:69.22:946,69,0	1/1:0,26:26:72.24:1006,72,0	1/1:0,28:28:75.25:1047,75,0	1/1:0,19:19:57.19:796,57,0	1/1:0,24:24:69.23:962,69,0	0/0:26,0:26:78.25:0,78,1222	1/1:0,14:14:39.13:545,39,0
chr10	54972817	.	GAAAATCA	G	3055.18	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=-2.847;DP=738;FS=4.100;HRun=0;HaplotypeScore=210.5586;InbreedingCoeff=0.8313;MQ=68.62;MQ0=0;MQRankSum=-5.517;QD=28.29;ReadPosRankSum=-2.562;VQSLOD=2.8363;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:90.11:0,90,2460	0/0:9,0:9:18.06:0,18,590	0/0:24,0:23:44.92:0,45,1198	0/0:26,0:21:35.02:0,35,857	0/0:34,0:34:25.90:0,26,1530	0/1:26,0:26:53.04:53,0,1488	0/0:25,0:25:39.82:0,40,1417	0/0:34,0:34:21.82:0,22,1413	0/0:27,0:27:37.51:0,38,1567	0/0:38,0:38:59.09:0,59,1939	0/0:21,0:21:21.43:0,21,869	0/0:25,0:25:12.97:0,13,1292	0/0:27,0:27:39.79:0,40,1707	0/0:33,0:33:33.21:0,33,1941	0/0:55,0:55:96.31:0,96,3374	0/0:28,0:28:81.26:0,81,2827	0/0:33,0:33:10.95:0,11,2000	0/0:24,0:24:56.73:0,57,1322	1/1:5,10:15:30.07:593,30,0	1/1:4,24:29:66.14:1407,66,0	1/1:1,14:15:9.03:218,9,0	0/0:14,0:14:38.59:0,39,678	0/0:28,0:28:44.76:0,45,1695	0/0:34,0:34:76.64:0,77,1951	0/0:29,0:29:21.64:0,22,1429	0/0:16,0:16:44.98:0,45,1180	1/1:0,22:23:39.13:945,39,0	0/0:10,0:10:22.13:0,22,578
chr10	54972935	.	GA	G	956.77	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.607;DP=726;FS=0.000;HRun=2;HaplotypeScore=103.8811;InbreedingCoeff=0.9999;MQ=74.77;MQ0=0;MQRankSum=-1.119;QD=29.90;ReadPosRankSum=1.414;VQSLOD=3.2483;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,135,2003	1/1:1,12:13:36.11:446,36,0	0/0:25,0:25:75.24:0,75,1098	0/0:23,0:23:63.20:0,63,913	0/0:24,0:24:66.22:0,66,989	0/0:26,0:26:78.26:0,78,1169	0/0:24,0:24:72.24:0,72,1079	0/0:29,0:29:84.28:0,84,1255	0/0:33,0:33:99:0,99,1483	0/0:28,0:28:81.26:0,81,1179	0/0:22,0:22:66.18:0,66,963	0/0:32,0:32:93.32:0,93,1394	0/0:12,0:12:36.12:0,36,540	0/0:26,0:26:75.24:0,75,1103	0/0:42,0:42:99:0,126,1889	1/1:1,18:19:51.16:632,51,0	0/0:28,0:28:84.28:0,84,1256	0/0:28,0:28:84.26:0,84,1237	0/0:30,0:30:90.29:0,90,1314	0/0:18,0:18:51.13:0,51,737	0/0:27,0:27:78.22:0,78,1144	0/0:27,0:27:81.27:0,81,1194	0/0:18,0:18:54.14:0,54,783	0/0:29,0:29:84.24:0,84,1226	0/0:25,0:25:75.25:0,75,1105	0/0:26,0:26:78.26:0,78,1169	0/0:29,0:29:84.16:0,84,1164	0/0:18,0:18:54.18:0,54,809
chr10	54974691	.	T	TCCTTGGGGCC	13162.04	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-2.625;DP=848;FS=0.000;HRun=0;HaplotypeScore=237.2536;InbreedingCoeff=0.9997;MQ=78.06;MQ0=0;MQRankSum=-13.070;QD=119.65;ReadPosRankSum=-2.853;VQSLOD=4.2717;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:66,0:66:99:0,190,6113	0/0:10,0:10:27.09:0,27,871	0/0:31,0:31:90.13:0,90,2567	0/0:22,0:22:56.86:0,57,1509	0/0:29,0:29:87.28:0,87,2774	0/0:21,0:21:63.19:0,63,1835	0/0:26,0:26:78.23:0,78,2375	0/0:42,0:42:99:0,111,3398	0/0:24,0:24:72.22:0,72,2151	0/0:38,0:38:99:0,102,3214	0/0:23,0:23:66.21:0,66,2095	0/0:32,0:32:90.29:0,90,2845	0/0:38,0:38:99:0,108,3493	0/0:25,0:25:69.24:0,69,2225	0/0:51,0:51:99:0,150,4803	0/0:34,0:34:99:0,99,3202	0/0:52,0:52:99:0,154,4880	0/0:21,0:21:57.20:0,57,1596	1/1:12,5:23:66.19:2536,66,0	1/1:9,12:25:66.19:2769,66,0	1/1:11,9:23:48.12:2367,48,0	0/0:17,0:17:48.16:0,48,1477	0/0:23,0:23:66.21:0,66,2028	0/0:32,0:32:90.29:0,90,2835	0/0:30,0:30:90.29:0,90,2796	0/0:36,0:36:99:0,108,3508	1/1:14,21:39:99:5490,111,0	0/0:15,0:15:45.15:0,45,1395
chr10	54979208	.	C	CT	500.10	PASS	AB=1.000;AC=14;AF=0.250;AN=56;BaseQRankSum=-0.102;DP=531;FS=3.205;HRun=11;HaplotypeScore=64.5792;InbreedingCoeff=0.7536;MQ=66.54;MQ0=0;MQRankSum=-0.549;QD=3.91;ReadPosRankSum=-1.655;VQSLOD=0.1520;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:47.72:0,48,371	1/1:0,5:5:12.02:122,12,0	0/1:12,0:11:8.77:9,0,68	0/1:14,0:13:2.53:3,0,101	0/0:20,0:21:46.77:0,47,351	0/0:30,0:33:80.77:0,81,598	0/0:7,0:7:17.91:0,18,139	0/0:27,0:29:58.78:0,59,447	0/0:14,1:16:7.44:0,7,231	0/0:18,0:20:24.65:0,25,326	0/0:23,0:23:56.74:0,57,441	0/0:18,0:18:41.79:0,42,325	0/0:13,0:15:33.93:0,34,242	0/0:18,0:18:38.83:0,39,302	0/0:23,2:26:22.34:0,22,347	1/1:1,14:15:15.84:342,16,0	0/0:19,0:19:46.84:0,47,353	0/0:19,0:20:46.81:0,47,354	1/1:12,0:11:10.21:73,10,0	1/1:14,0:29:16.15:77,16,0	1/1:3,1:10:2.90:16,3,0	0/0:18,0:18:41.82:0,42,322	0/0:23,0:23:53.74:0,54,418	0/0:17,0:19:47.93:0,48,343	0/0:18,0:19:49.82:0,50,375	0/0:22,0:23:51.85:0,52,383	1/1:9,0:27:5.68:29,6,0	0/0:10,0:11:22.06:0,22,167
chr10	54979609	.	TA	T	1895.26	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=10.061;DP=558;FS=3.315;HRun=9;HaplotypeScore=57.8411;InbreedingCoeff=0.9937;MQ=75.26;MQ0=3;MQRankSum=1.131;QD=19.54;ReadPosRankSum=0.390;VQSLOD=4.0808;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:84.18:0,84,934	0/0:8,0:8:23.79:0,24,244	0/0:19,0:15:19.55:0,20,240	0/0:16,0:14:17.19:0,17,187	0/0:32,0:32:70.98:0,71,985	0/0:14,0:14:39.12:0,39,450	0/0:18,0:18:53.18:0,53,584	0/0:34,0:34:87.22:0,87,968	0/0:15,0:15:45.13:0,45,519	0/0:17,0:17:48.14:0,48,554	0/0:24,0:24:54.15:0,54,614	0/0:12,0:12:27.07:0,27,302	0/0:14,0:14:33.10:0,33,381	0/0:22,0:22:63.16:0,63,707	0/0:24,0:24:63.17:0,63,709	0/0:23,0:23:66.18:0,66,753	0/0:22,0:23:63:0,63,691	0/0:23,0:23:63.13:0,63,702	1/1:5,20:25:63.02:571,63,0	1/1:6,25:31:71.93:640,72,0	1/1:1,16:17:36.02:329,36,0	0/0:16,0:16:42.10:0,42,464	0/0:11,0:11:30.08:0,30,336	0/0:9,0:9:24.07:0,24,277	0/0:20,0:20:60.13:0,60,677	0/0:25,0:25:72.20:0,72,815	1/1:2,22:24:29.20:515,29,0	0/0:11,0:11:33.09:0,33,371
chr10	54980222	.	TAAAAAAA	T	11357.28	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=1.441;DP=476;FS=0.494;HRun=17;HaplotypeScore=118.6972;InbreedingCoeff=0.9349;MQ=64.89;MQ0=2;MQRankSum=-10.108;QD=35.27;ReadPosRankSum=5.837;VQSLOD=3.0050;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,15:18:36.01:716,36,0	0/0:2,0:8:15.05:0,15,372	0/0:42,0:15:27.08:0,27,605	0/0:26,0:13:9.49:0,9,475	1/1:2,13:16:32.85:627,33,0	1/1:4,10:14:23.86:477,24,0	1/1:2,12:14:26.94:537,27,0	1/1:8,18:26:53.61:1037,54,0	1/1:2,12:14:23.94:477,24,0	1/1:3,12:15:35.95:663,36,0	1/1:3,10:13:17.70:357,18,0	1/1:3,12:15:27.01:518,27,0	1/1:1,9:10:27.03:497,27,0	1/1:1,18:19:39.11:776,39,0	1/1:3,14:17:11.71:632,12,0	0/0:4,0:12:24.08:0,24,649	1/1:4,13:19:32.92:588,33,0	1/1:5,8:13:14.86:298,15,0	0/0:10,0:12:24.07:0,24,718	0/0:5,0:10:27.09:0,27,814	0/0:2,0:8:9.03:0,9,296	1/1:2,7:9:17.97:358,18,0	1/1:7,10:18:24.15:432,24,0	1/1:5,8:14:17.92:339,18,0	1/1:9,20:30:47.66:927,48,0	1/1:8,17:26:53.90:1042,54,0	0/0:22,0:33:84.29:0,84,2773	1/1:0,2:2:3.01:60,3,0
chr10	54980618	.	G	GCT	24547.85	PASS	AB=1.000;AC=49;AF=0.875;AN=56;BaseQRankSum=-8.781;DP=586;FS=1.273;HRun=0;HaplotypeScore=62.1311;InbreedingCoeff=0.9057;MQ=78.87;MQ0=4;MQRankSum=-4.685;QD=45.12;ReadPosRankSum=2.325;VQSLOD=6.0052;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,38:41:99:1999,111,0	0/0:8,0:8:24.05:0,24,316	0/0:15,0:15:21.54:0,22,288	0/1:14,0:14:1.17:1,0,270	1/1:2,15:18:45.15:806,45,0	1/1:2,22:24:60.21:1080,60,0	1/1:4,21:25:51.17:919,51,0	1/1:0,21:21:60.21:1071,60,0	1/1:2,20:22:54.19:972,54,0	1/1:3,16:18:48.16:862,48,0	1/1:2,9:11:24.08:428,24,0	1/1:2,25:26:63.22:1134,63,0	1/1:2,19:20:51.17:910,51,0	1/1:2,25:27:69.24:1243,69,0	1/1:1,18:19:51.17:919,51,0	0/0:19,0:19:57.18:0,57,781	1/1:0,33:33:81.28:1459,81,0	1/1:0,36:36:99:1837,102,0	1/1:2,24:26:72.23:1264,72,0	1/1:0,9:8:24.08:432,24,0	1/1:2,29:31:75.26:1351,75,0	1/1:1,14:15:36.12:647,36,0	1/1:0,6:8:21.07:376,21,0	1/1:1,22:22:57.20:1026,57,0	1/1:0,27:26:78.27:1403,78,0	1/1:0,19:19:57.20:1027,57,0	1/1:2,18:20:60.20:1058,60,0	1/1:0,8:8:18.06:324,18,0
chr10	54980763	.	C	CGGCT	7939.97	PASS	AB=0.896;AC=42;AF=0.840;AN=50;BaseQRankSum=-5.120;DP=563;FS=19.666;HRun=0;HaplotypeScore=91.6288;InbreedingCoeff=0.5475;MQ=67.86;MQ0=5;MQRankSum=-1.805;QD=15.82;ReadPosRankSum=0.421;VQSLOD=3.0654;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:21,6:27:12.04:279,12,0	0/0:7,0:7:12.04:0,12,192	0/0:14,0:11:3.01:0,3,45	./.	0/1:8,1:9:38.85:122,0,39	1/1:14,8:22:21.54:503,22,0	1/1:25,5:30:9.03:216,9,0	1/1:18,3:21:15.03:296,15,0	1/1:17,7:25:21.07:502,21,0	1/1:19,3:22:7.38:133,7,0	1/1:6,2:8:3.01:72,3,0	1/1:18,13:30:33.11:790,33,0	1/1:15,4:20:15.94:327,16,0	1/1:20,13:36:24.08:562,24,0	1/1:10,7:18:12.04:270,12,0	0/0:24,0:24:51.11:0,51,738	1/1:17,15:35:36.12:863,36,0	1/1:15,17:32:45.15:1079,45,0	1/1:18,1:21:6.02:111,6,0	./.	0/1:29,0:33:0.26:1,0,0	1/1:8,2:10:6.02:141,6,0	1/1:8,0:8:6.01:96,6,0	1/1:20,20:40:48.16:1150,48,0	1/1:17,3:21:9.03:216,9,0	1/1:10,0:10:0.47:1,0,0	1/1:12,0:20:12.04:209,12,0	./.
chr10	54982881	.	G	GTGTC	3412.74	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-3.186;DP=752;FS=1.098;HRun=0;HaplotypeScore=197.4472;InbreedingCoeff=0.9908;MQ=60.56;MQ0=4;MQRankSum=-2.681;QD=36.70;ReadPosRankSum=-0.304;VQSLOD=3.7161;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:81.55:0,82,1265	0/0:21,0:21:45.12:0,45,706	0/0:42,0:28:13.45:0,13,328	0/0:36,0:24:28.85:0,29,408	0/0:35,0:35:75.21:0,75,1239	0/0:20,0:20:51.17:0,51,884	0/0:29,0:29:68.82:0,69,1056	0/0:38,0:38:92:0,92,1180	0/0:29,0:29:59.95:0,60,959	0/0:31,0:31:74.95:0,75,1042	0/0:21,0:21:48.14:0,48,818	0/0:36,0:37:81.74:0,82,1372	0/0:19,0:19:42.12:0,42,659	0/0:19,0:19:41.70:0,42,680	0/0:29,0:29:53.64:0,54,904	0/0:26,0:25:57.07:0,57,932	0/0:27,0:27:54.14:0,54,880	0/0:19,0:19:36.99:0,37,608	1/1:19,6:25:42.05:772,42,0	1/1:9,9:19:36.09:791,36,0	1/1:14,15:29:27:521,27,0	0/0:13,0:13:36.11:0,36,596	0/0:21,0:21:42.07:0,42,671	0/0:37,0:36:81.28:0,81,1361	0/0:27,0:27:54.17:0,54,894	0/0:31,0:31:72.13:0,72,1126	1/1:4,14:20:57.15:1328,57,0	0/0:9,0:9:17.99:0,18,233
chr10	54982907	.	CGTGT	C	9823.54	PASS	AB=0.698;AC=45;AF=0.804;AN=56;BaseQRankSum=-3.836;DP=673;FS=8.840;HRun=0;HaplotypeScore=183.3342;InbreedingCoeff=0.6085;MQ=52.13;MQ0=10;MQRankSum=3.558;QD=17.14;ReadPosRankSum=2.652;VQSLOD=3.9489;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,23:43:29.74:478,30,0	1/1:10,4:15:15.02:213,15,0	0/0:39,0:21:12:0,12,186	0/0:32,0:17:14.97:0,15,291	1/1:20,8:29:18.06:289,18,0	1/1:13,8:21:24.07:396,24,0	1/1:12,15:29:30.10:473,30,0	1/1:28,6:34:24.07:371,24,0	1/1:10,17:28:41.46:772,41,0	1/1:9,12:23:30.01:610,30,0	1/1:6,14:20:33.10:505,33,0	1/1:19,12:34:39.13:614,39,0	1/1:4,12:16:30.09:470,30,0	1/1:5,14:19:23.79:391,24,0	1/1:11,10:22:32.99:520,33,0	1/1:13,16:28:32.99:520,33,0	1/1:12,9:21:27.09:446,27,0	0/1:13,7:20:46.02:345,0,46	0/0:11,0:14:20.12:0,20,159	0/0:7,0:12:6.82:0,7,24	0/1:18,1:31:40.78:41,0,77	1/1:5,8:14:21.06:324,21,0	1/1:9,5:15:14.69:244,15,0	1/1:21,14:35:30.10:494,30,0	1/1:10,13:22:27.09:429,27,0	1/1:16,11:27:48.01:678,48,0	0/1:9,1:18:23.91:24,0,63	1/1:1,3:5:12.03:176,12,0
chr10	54982946	.	ATGTGTG	A	7090.07	PASS	AB=0.814;AC=43;AF=0.768;AN=56;BaseQRankSum=-3.232;DP=703;FS=3.526;HRun=0;HaplotypeScore=255.8861;InbreedingCoeff=0.4427;MQ=42.30;MQ0=16;MQRankSum=1.882;QD=11.31;ReadPosRankSum=2.680;VQSLOD=3.9514;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:20,29:52:8.08:135,8,0	0/0:8,0:8:9.01:0,9,130	0/0:15,0:3:5.95:0,6,82	0/0:20,0:9:21:0,21,340	1/1:9,7:20:2.99:24,3,0	1/1:5,11:17:9.01:152,9,0	1/1:13,21:36:8.83:162,9,0	1/1:18,26:35:44.07:890,44,0	1/1:13,12:27:23.91:382,24,0	1/1:6,17:29:72.19:1334,72,0	1/1:11,8:20:14.99:193,15,0	1/1:7,16:27:22.56:471,23,0	1/1:7,9:18:20.98:299,21,0	1/1:11,10:22:2.72:63,3,0	1/1:11,17:29:3.79:66,4,0	0/0:33,0:32:44.92:0,45,497	1/1:11,19:30:22.52:372,23,0	1/1:8,11:19:20.97:311,21,0	0/1:22,0:22:19.75:283,0,20	1/1:18,0:18:5.97:107,6,0	0/1:45,0:42:1.98:5,0,2	0/1:6,19:26:1.97:119,0,2	0/1:3,13:17:0.36:1,0,0	1/1:12,20:35:3.06:64,3,0	1/1:7,10:19:9.50:169,10,0	1/1:9,21:31:67.43:1188,67,0	0/1:13,0:13:8.59:196,0,9	1/1:4,0:5:6.02:103,6,0
chr10	54982964	.	GTGTGTC	G	4416.56	PASS	AB=0.977;AC=26;AF=0.464;AN=56;BaseQRankSum=7.003;DP=691;FS=24.043;HRun=0;HaplotypeScore=239.6727;InbreedingCoeff=-0.4165;MQ=46.55;MQ0=11;MQRankSum=-6.449;QD=7.54;ReadPosRankSum=11.174;VQSLOD=1.5548;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:48,0:48:50.80:60,0,51	0/0:5,0:6:6.02:0,6,135	0/0:19,0:9:20.62:0,21,170	0/0:28,0:21:31.22:0,31,504	0/0:18,0:18:11.97:0,12,98	0/1:19,0:19:67.66:68,0,134	0/1:33,0:32:73.02:87,0,73	0/1:39,0:33:99:323,0,112	0/1:25,0:25:57.98:195,0,58	0/1:31,0:31:66.52:768,0,67	0/1:15,0:15:70.88:71,0,74	0/1:25,0:25:60.94:307,0,61	0/1:14,0:14:47.83:152,0,48	0/1:21,0:21:28.67:29,0,107	0/1:32,0:31:16.07:16,0,184	0/0:24,0:32:64.66:0,65,709	0/1:29,0:29:59.19:206,0,59	0/1:18,0:18:25.49:168,0,25	1/1:10,14:23:44.93:641,45,0	1/1:2,18:20:5.97:140,6,0	1/1:19,33:49:2.68:35,3,0	0/1:25,0:25:50.02:50,0,53	0/1:15,0:15:0.74:1,0,1	0/1:30,0:31:18.93:40,0,19	0/1:18,0:18:68.41:90,0,68	0/1:30,0:30:77.35:653,0,77	0/1:2,13:15:1.75:263,0,2	0/1:7,0:7:19.09:53,0,19
chr10	54982966	.	G	GTCTGTC	1410.58	PASS	AB=0.990;AC=22;AF=0.393;AN=56;BaseQRankSum=4.897;DP=699;FS=6.757;HRun=0;HaplotypeScore=256.5100;InbreedingCoeff=-0.4316;MQ=46.96;MQ0=11;MQRankSum=-4.353;QD=2.64;ReadPosRankSum=2.075;VQSLOD=1.6083;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:48,0:48:46.40:46,0,149	1/1:4,0:5:6.02:91,6,0	0/0:21,0:10:19.42:0,19,279	0/0:31,0:24:59.13:0,59,782	0/0:17,0:17:12.03:0,12,190	0/1:18,0:18:27.81:28,0,189	0/1:34,0:33:0.86:1,0,172	0/1:42,0:36:99:240,0,584	0/1:25,0:25:60.48:60,0,201	0/1:32,0:32:99:186,0,582	0/1:14,0:14:8.84:9,0,145	0/1:26,0:26:74.79:75,0,202	0/1:14,0:14:24.07:24,0,224	0/1:21,0:21:8.82:9,0,176	0/0:32,0:31:30.06:0,30,427	0/1:25,9:33:60.57:397,0,61	0/0:30,0:30:8.60:0,9,231	0/1:18,0:18:48.75:49,0,182	0/1:23,0:22:99:136,0,204	0/0:19,0:19:5.64:0,6,59	0/1:52,0:49:18.64:30,0,19	0/1:24,0:24:11.91:12,0,145	0/1:15,0:15:0.29:1,0,0	0/1:32,0:32:1.34:1,0,42	0/1:18,0:18:33.17:33,0,157	0/1:30,0:30:89.34:89,0,552	0/0:15,0:15:12.12:0,12,121	0/1:9,0:9:47.53:48,0,161
chr10	54989138	.	G	GT	18608.24	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=15.011;DP=654;FS=1.126;HRun=3;HaplotypeScore=110.4235;InbreedingCoeff=0.9983;MQ=89.87;MQ0=0;MQRankSum=-4.444;QD=37.52;ReadPosRankSum=2.218;VQSLOD=4.3197;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,20:23:51.17:709,51,0	1/1:2,16:18:45.15:630,45,0	0/0:26,0:27:60.12:0,60,691	0/0:25,0:25:60.18:0,60,714	1/1:3,23:26:69.19:942,69,0	1/1:0,22:22:63.21:882,63,0	1/1:0,7:7:18.06:252,18,0	1/1:3,31:34:93.30:1284,93,0	1/1:4,20:25:57.19:793,57,0	1/1:2,28:32:90.28:1227,90,0	1/1:2,21:23:60.20:840,60,0	1/1:0,23:23:66.22:924,66,0	1/1:1,25:26:66.20:906,66,0	1/1:0,22:22:63.21:881,63,0	1/1:1,35:36:99:1470,105,0	1/1:0,20:20:51.17:714,51,0	1/1:1,19:20:57.19:798,57,0	1/1:1,30:31:87.29:1218,87,0	0/0:17,0:17:48.14:0,48,565	0/0:32,0:32:84.22:0,84,983	0/0:13,0:13:36.09:0,36,420	1/1:1,14:15:39.13:547,39,0	1/1:3,15:18:42.14:587,42,0	1/1:1,14:15:42.14:588,42,0	1/1:1,23:24:69.23:966,69,0	1/1:1,17:19:54.15:735,54,0	0/0:44,0:44:99:0,132,1571	1/1:0,17:17:51.17:714,51,0
chr10	54991860	.	GGGCGTGGCTCGGA	G	15786.93	PASS	AC=42;AF=0.778;AN=54;BaseQRankSum=11.343;DP=547;FS=31.631;HRun=0;HaplotypeScore=200.6224;InbreedingCoeff=0.9120;MQ=75.21;MQ0=0;MQRankSum=-10.606;QD=39.97;ReadPosRankSum=3.290;VQSLOD=3.0246;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:16,11:27:18.06:599,18,0	./.	0/0:16,0:16:27.09:0,27,922	0/0:13,0:13:21.07:0,21,860	1/1:5,9:14:21.07:755,21,0	1/1:11,10:21:18.06:684,18,0	1/1:7,15:22:24.05:914,24,0	1/1:11,18:29:51.11:1133,51,0	1/1:6,8:14:21.07:800,21,0	1/1:7,6:13:21.05:643,21,0	1/1:7,3:10:6.02:228,6,0	1/1:9,16:25:33.11:1255,33,0	1/1:10,12:22:15.52:550,16,0	1/1:12,10:22:33.11:1249,33,0	1/1:10,14:24:36.12:1329,36,0	1/1:3,11:14:21.54:800,22,0	1/1:13,15:28:18.06:685,18,0	1/1:7,17:24:18.06:686,18,0	0/0:10,0:10:18.06:0,18,802	0/0:15,0:15:15.05:0,15,811	0/0:75,0:75:99:0,141,6957	1/1:5,9:14:11.59:456,12,0	1/1:4,4:8:3.01:114,3,0	1/1:4,13:17:14.67:568,15,0	1/1:7,10:17:18.06:661,18,0	1/1:12,12:24:36.11:1105,36,0	0/0:17,0:17:36.02:0,36,1656	1/1:0,6:6:15.05:571,15,0
chr10	54992895	.	G	GTTT	8693.88	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=8.823;DP=455;FS=3.073;HRun=5;HaplotypeScore=86.9147;InbreedingCoeff=0.9449;MQ=74.49;MQ0=0;MQRankSum=-4.834;QD=24.56;ReadPosRankSum=-0.609;VQSLOD=1.2862;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,15:23:41.99:610,42,0	1/1:1,0:5:6.02:67,6,0	0/0:21,0:18:29.13:0,29,403	0/0:14,0:11:15.84:0,16,186	1/1:5,10:16:29.53:440,30,0	1/1:3,12:17:15.05:275,15,0	1/1:1,9:11:27.56:525,28,0	1/1:22,12:37:54.55:679,55,0	1/1:3,16:22:36.12:654,36,0	1/1:7,9:19:40.46:573,40,0	1/1:8,7:15:21.41:254,21,0	1/1:5,11:17:21.54:417,22,0	1/1:3,8:12:18.05:306,18,0	1/1:4,3:9:12.04:211,12,0	1/1:6,10:16:24.95:419,25,0	1/1:3,2:18:30.08:378,30,0	1/1:6,7:15:30.06:532,30,0	1/1:3,15:20:36.12:672,36,0	0/0:24,0:24:66.18:0,66,918	0/0:16,0:16:48.11:0,48,678	0/0:11,0:11:30.07:0,30,411	1/1:7,2:9:10.23:145,10,0	1/1:3,4:12:18.06:284,18,0	1/1:4,6:12:18:258,18,0	1/1:3,11:16:15.05:303,15,0	1/1:4,12:17:29.90:416,30,0	0/0:15,0:15:42.08:0,42,574	1/1:6,7:14:15.05:276,15,0
chr10	54996697	.	CT	C	343.76	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=4.492;DP=616;FS=2.005;HRun=7;HaplotypeScore=71.1873;InbreedingCoeff=0.9408;MQ=84.85;MQ0=4;MQRankSum=0.599;QD=13.75;ReadPosRankSum=-0.044;VQSLOD=3.2394;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:81.20:0,81,988	1/1:2,4:6:6.01:61,6,0	0/0:63,0:42:79.98:0,80,765	0/0:39,0:27:22.37:0,22,299	0/0:19,0:19:51.16:0,51,641	0/0:22,0:22:54.13:0,54,629	0/0:21,0:20:51.11:0,51,610	0/0:35,0:35:93.26:0,93,1132	0/0:11,0:11:27.09:0,27,340	0/0:19,0:19:54.15:0,54,655	0/0:19,0:19:57.17:0,57,704	0/0:22,0:22:57.18:0,57,716	0/0:23,0:23:57.17:0,57,704	0/0:16,0:16:42.11:0,42,502	0/0:18,0:18:54.16:0,54,666	1/1:2,17:19:37:394,37,0	0/0:33,0:33:84.26:0,84,1044	0/0:20,0:20:57.14:0,57,687	0/0:27,0:26:69.22:0,69,868	0/0:25,0:25:66.19:0,66,806	0/0:18,0:18:42.04:0,42,469	0/0:17,0:17:45.09:0,45,537	0/0:16,0:16:39.11:0,39,477	0/0:15,0:14:39.12:0,39,488	0/0:19,0:19:48.07:0,48,556	0/0:13,0:13:36.10:0,36,430	0/0:17,0:17:45.14:0,45,565	0/0:13,0:13:30.10:0,30,377
chr10	54997460	.	AAT	A	16663.61	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=6.991;DP=589;FS=11.175;HRun=0;HaplotypeScore=76.6176;InbreedingCoeff=0.9995;MQ=73.50;MQ0=5;MQRankSum=-1.933;QD=38.13;ReadPosRankSum=4.586;VQSLOD=6.5563;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,29:28:78.26:1148,78,0	0/0:19,0:19:51.17:0,51,947	0/0:22,0:21:61.45:0,61,1073	0/0:11,0:10:26.76:0,27,452	1/1:0,29:29:69.23:1015,69,0	1/1:0,30:30:75.25:1105,75,0	1/1:0,21:21:51.17:751,51,0	1/1:1,24:25:69.23:1016,69,0	1/1:0,18:18:48.16:707,48,0	1/1:0,20:20:60.20:884,60,0	1/1:0,9:9:27.09:395,27,0	1/1:1,24:24:66.22:962,66,0	1/1:2,19:21:45.15:663,45,0	1/1:0,21:21:60.20:884,60,0	1/1:0,21:19:54.18:795,54,0	0/0:21,0:21:57.20:0,57,1035	1/1:0,25:25:66.22:972,66,0	1/1:0,25:24:45.15:663,45,0	0/0:18,0:17:54.19:0,54,997	0/0:20,0:20:60.19:0,60,1080	0/0:19,0:19:54.18:0,54,991	1/1:0,21:21:57.19:839,57,0	1/1:0,14:14:33.11:485,33,0	1/1:0,15:15:36.12:530,36,0	1/1:1,28:29:84.28:1237,84,0	1/1:1,27:28:81.26:1171,81,0	0/0:22,0:22:63.18:0,63,1114	1/1:1,10:11:30.10:442,30,0
chr10	54999867	.	CCTGGAGGG	C	3740.54	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=11.547;DP=631;FS=1.758;HRun=0;HaplotypeScore=159.3882;InbreedingCoeff=0.9955;MQ=78.36;MQ0=0;MQRankSum=-8.583;QD=37.78;ReadPosRankSum=-1.364;VQSLOD=3.4520;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:56:99:0,151,6236	0/0:6,0:6:18.06:0,18,696	0/0:17,0:17:23.25:0,23,1851	0/0:19,0:19:54.19:0,54,2153	0/0:21,0:21:60.21:0,60,2450	0/0:18,0:18:51.18:0,51,2040	0/0:22,0:22:66.23:0,66,2866	0/0:22,0:22:54.18:0,54,2170	0/0:19,0:19:57.20:0,57,2484	0/0:24,0:24:51.18:0,51,2111	0/0:12,0:12:33.09:0,33,1185	0/0:28,0:28:84.25:0,84,3215	0/0:19,0:19:57.20:0,57,2487	0/0:20,0:20:57.20:0,57,2410	0/0:16,0:16:48.16:0,48,1933	0/0:20,0:20:60.21:0,60,2460	0/0:41,0:41:99:0,117,4940	0/0:26,0:26:75.26:0,75,3272	1/1:3,17:20:51.14:1211,51,0	1/1:1,24:25:27.04:539,27,0	1/1:5,17:22:20.90:345,21,0	0/0:19,0:19:54.19:0,54,2163	0/0:24,0:24:63.20:0,63,2592	0/0:25,0:25:69.24:0,69,2863	0/0:24,0:24:72.25:0,72,3037	0/0:21,0:21:57.18:0,57,2120	1/1:0,32:32:60.68:1645,61,0	0/0:13,0:13:33.11:0,33,1406
chr10	55001464	.	TG	T	13371.93	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=6.509;DP=682;FS=6.446;HRun=7;HaplotypeScore=73.1599;InbreedingCoeff=0.9995;MQ=76.55;MQ0=0;MQRankSum=-3.963;QD=24.95;ReadPosRankSum=5.842;VQSLOD=5.1165;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:2,46:48:99:1192,117,0	1/1:0,13:13:36.08:367,36,0	0/0:23,0:23:54.16:0,54,650	0/0:27,0:28:57.51:0,58,543	1/1:0,21:21:48.01:466,48,0	1/1:2,14:16:33.07:336,33,0	1/1:4,22:26:51.11:520,51,0	1/1:4,20:24:60.10:601,60,0	1/1:1,19:20:51.12:520,51,0	1/1:3,24:27:72.16:735,72,0	1/1:1,11:12:27.06:275,27,0	1/1:3,33:36:84.19:856,84,0	1/1:1,24:25:66.15:673,66,0	1/1:1,23:24:60.14:612,60,0	1/1:2,17:19:45.10:459,45,0	1/1:2,30:32:84.19:857,84,0	1/1:4,31:35:87.19:888,87,0	1/1:2,23:25:35.74:640,36,0	0/0:17,0:17:45.14:0,45,565	0/0:15,0:15:39.12:0,39,488	0/0:46,0:46:99:0,126,1540	1/1:1,23:24:60.13:610,60,0	1/1:0,16:16:39.09:395,39,0	1/1:1,41:42:99:1070,105,0	1/1:1,23:23:57.11:581,57,0	1/1:1,15:16:42.07:415,42,0	0/0:17,0:17:51.14:0,51,615	1/1:0,11:11:30.07:306,30,0
chr10	55001776	.	CTT	C	2149.56	PASS	AB=1.000;AC=35;AF=0.700;AN=50;BaseQRankSum=4.804;DP=301;FS=7.169;HRun=2;HaplotypeScore=71.5907;InbreedingCoeff=0.6147;MQ=80.70;MQ0=14;MQRankSum=-3.629;QD=11.75;ReadPosRankSum=2.312;VQSLOD=0.6773;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:15:0.78:131,1,0	./.	0/0:30,0:14:35.91:0,36,659	0/0:43,0:26:47.20:0,47,610	1/1:2,0:2:2.98:21,3,0	1/1:8,0:8:17.80:121,18,0	1/1:9,0:9:19.73:136,20,0	1/1:27,0:26:22.01:391,22,0	1/1:6,0:6:17.85:126,18,0	0/1:8,0:7:42.35:79,0,42	./.	1/1:7,0:6:14.85:103,15,0	1/1:14,0:14:11.15:193,11,0	1/1:5,0:5:11.84:79,12,0	1/1:14,0:14:30.64:197,31,0	1/1:0,8:8:2.81:47,3,0	0/1:8,0:8:4.11:85,0,4	1/1:11,0:9:16.32:119,16,0	0/0:12,0:12:32.36:0,32,665	0/0:3,0:3:9.03:0,9,182	0/0:20,0:20:42.14:0,42,851	./.	1/1:5,0:5:11.91:86,12,0	1/1:17,0:14:19.51:118,20,0	1/1:5,0:5:14.85:104,15,0	0/1:7,0:7:7.81:85,0,8	0/0:10,0:10:30.10:0,30,590	1/1:6,0:6:16.09:106,16,0
chr10	55001777	.	TTG	T	5777.91	PASS	AB=0.944;AC=38;AF=0.760;AN=50;BaseQRankSum=-0.253;DP=296;FS=6.540;HRun=0;HaplotypeScore=57.2867;InbreedingCoeff=0.6799;MQ=79.70;MQ0=15;MQRankSum=-1.976;QD=26.14;ReadPosRankSum=1.116;VQSLOD=5.4911;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:14,1:14:23.11:344,23,0	./.	0/0:29,0:13:33.03:0,33,492	0/1:43,0:26:18.46:18,0,414	1/1:1,1:2:3.01:46,3,0	1/1:7,1:8:18.06:265,18,0	1/1:9,0:9:27.05:365,27,0	1/1:22,4:25:73.79:1089,74,0	1/1:6,0:6:18.06:276,18,0	0/1:7,1:7:29.22:220,0,29	./.	1/1:7,0:6:15.05:228,15,0	1/1:14,0:14:38.78:527,39,0	1/1:4,1:5:12.04:181,12,0	1/1:13,1:14:33.10:472,33,0	1/1:8,0:8:2.90:39,3,0	1/1:6,1:7:15.05:208,15,0	1/1:11,0:9:26.88:329,27,0	0/0:12,0:12:31.82:0,32,568	0/0:3,0:3:9.03:0,9,141	0/0:20,0:20:42.14:0,42,708	./.	1/1:4,1:5:12.04:183,12,0	1/1:14,1:13:21.04:259,21,0	1/1:5,0:5:15.05:232,15,0	1/1:5,1:6:18.06:261,18,0	0/0:10,0:10:30.08:0,30,464	1/1:5,1:6:18.02:236,18,0
chr10	55002145	.	T	TCA	12560.34	PASS	AB=0.553;AC=41;AF=0.732;AN=56;BaseQRankSum=-5.625;DP=523;FS=21.920;HRun=0;HaplotypeScore=110.5666;InbreedingCoeff=0.7226;MQ=70.20;MQ0=2;MQRankSum=-0.014;QD=31.32;ReadPosRankSum=3.857;VQSLOD=4.9946;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,44:52:97.21:1595,97,0	1/1:3,0:10:20.96:195,21,0	0/0:33,0:31:61.48:0,61,674	0/0:23,0:20:26.02:0,26,284	0/1:1,9:10:15.99:278,0,16	1/1:5,16:21:27.09:449,27,0	1/1:2,14:16:30.07:470,30,0	1/1:16,21:39:30.67:928,31,0	1/1:1,15:16:42.14:698,42,0	1/1:0,14:14:42.13:664,42,0	0/1:2,5:7:22.81:184,0,23	1/1:1,16:18:36.12:598,36,0	1/1:5,19:25:54.18:897,54,0	1/1:6,5:10:21.07:341,21,0	1/1:2,18:21:42.14:698,42,0	1/1:5,0:22:38.82:411,39,0	0/1:3,13:16:4.42:465,0,4	1/1:4,11:15:30.51:535,31,0	0/0:9,0:22:29.44:0,29,151	0/0:0,0:5:8.52:0,9,42	0/0:1,0:21:26.44:0,26,127	1/1:1,17:18:48.16:795,48,0	1/1:1,8:9:14.88:249,15,0	1/1:3,29:32:60.21:997,60,0	1/1:2,8:10:18.53:300,19,0	1/1:1,14:15:42.11:664,42,0	0/0:0,0:17:25.57:0,26,126	1/1:0,3:3:9.03:150,9,0
chr10	55002177	.	GCACACAGACACACACACAAAGACACAAAGACA	G	2062.66	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-2.427;DP=561;FS=2.514;HRun=0;HaplotypeScore=467.6929;InbreedingCoeff=0.9650;MQ=57.71;MQ0=4;MQRankSum=-4.360;QD=36.83;ReadPosRankSum=0.208;VQSLOD=0.2639;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,144,9471	0/0:8,0:8:21.03:0,21,415	0/0:45,0:34:81.77:0,82,2279	0/0:36,0:23:56.84:0,57,1572	0/0:13,0:13:36.12:0,36,3349	0/0:14,0:14:30.07:0,30,2768	0/0:18,0:18:51.15:0,51,3366	0/0:30,0:30:84.21:0,84,2921	0/0:23,0:23:54.17:0,54,4401	0/0:13,0:13:35.70:0,36,2936	0/0:7,0:7:18.06:0,18,1785	0/0:22,0:22:54.16:0,54,3910	0/0:23,0:23:60.13:0,60,3310	0/0:12,0:12:27.55:0,28,2222	0/0:25,0:25:66.21:0,66,5248	0/0:25,0:25:69.09:0,69,2103	0/0:18,0:18:39.11:0,39,2612	0/0:18,0:18:44.50:0,45,3202	1/1:16,1:18:44.96:961,45,0	1/1:4,6:10:9.03:346,9,0	1/1:14,0:14:12:123,12,0	0/0:18,0:18:53.76:0,54,3056	0/0:12,0:12:30.10:0,30,2482	0/0:33,0:33:84.24:0,84,6581	0/0:12,0:12:33.11:0,33,2729	0/0:18,0:18:54.17:0,54,4173	1/1:12,2:14:21.03:785,21,0	0/0:8,0:8:15.05:0,15,1448
chr10	55002204	.	AAGACACACAC	A	1427.52	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=1.000;DP=584;FS=7.581;HRun=0;HaplotypeScore=235.0796;InbreedingCoeff=0.5550;MQ=53.03;MQ0=22;MQRankSum=-6.029;QD=21.63;ReadPosRankSum=-1.902;VQSLOD=1.5493;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:56:99:0,141,4148	1/1:4,2:6:10.80:134,11,0	0/0:33,0:13:22.04:0,22,256	0/0:32,0:11:9.78:0,10,150	0/0:15,0:15:45.10:0,45,1652	0/0:20,0:20:51.13:0,51,1813	0/0:19,0:19:54.13:0,54,1654	0/0:29,0:28:83.99:0,84,1193	0/0:28,0:26:70.04:0,70,2166	0/0:19,0:17:48.11:0,48,1375	0/0:10,0:10:24.05:0,24,555	0/0:22,0:23:60.13:0,60,2220	0/0:18,0:18:50.93:0,51,1401	0/0:14,0:13:33.06:0,33,1318	0/0:36,0:36:93.66:0,94,2900	1/1:14,10:25:63.07:1127,63,0	0/0:16,0:16:42.28:0,42,1244	0/0:23,0:23:42.63:0,43,1824	0/1:10,0:7:47.13:149,0,47	0/1:8,0:8:0.94:45,0,1	0/0:10,0:9:5.83:0,6,24	0/0:20,0:18:44.40:0,44,973	0/0:10,0:10:20.93:0,21,714	0/0:35,0:36:84.21:0,84,2846	0/0:10,0:10:27.07:0,27,1019	0/0:27,0:27:81.22:0,81,2418	0/1:17,0:16:99:111,0,132	0/0:12,0:12:27.08:0,27,890
chr10	55002206	.	G	GAC	6893.32	PASS	AB=0.755;AC=31;AF=0.574;AN=54;BaseQRankSum=-6.022;DP=596;FS=5.963;HRun=0;HaplotypeScore=143.9584;InbreedingCoeff=-0.0982;MQ=52.96;MQ0=22;MQRankSum=2.988;QD=14.27;ReadPosRankSum=0.698;VQSLOD=4.0986;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:38,18:56:31.67:912,0,32	0/0:6,0:6:4.51:0,5,12	./.	0/0:31,0:10:2.04:0,2,6	0/1:10,5:15:6.36:271,0,6	0/1:16,6:22:63.72:333,0,64	1/1:11,9:20:18.15:447,18,0	1/1:22,8:29:18.42:203,18,0	1/1:12,18:28:45.15:679,45,0	1/1:16,2:16:18.03:215,18,0	0/1:7,3:10:21.63:122,0,22	0/1:18,6:25:87.99:396,0,88	0/1:13,5:18:9.19:269,0,9	0/1:4,11:14:39.56:290,0,40	1/1:27,2:37:34.04:509,34,0	0/0:25,0:25:26.48:0,26,116	0/1:11,5:16:69.91:244,0,70	0/1:10,15:26:59.45:415,0,59	0/0:10,0:7:7.22:0,7,63	0/0:8,0:8:2.84:0,3,14	1/1:11,0:10:2.51:6,3,0	1/1:15,5:18:4.10:171,4,0	1/1:8,2:10:9.01:114,9,0	0/1:28,9:38:99:532,0,143	1/1:8,3:11:11.87:150,12,0	0/1:15,8:25:7.51:489,0,8	0/1:17,0:16:10.77:11,0,126	0/1:5,5:12:92.88:115,0,93
chr10	55002209	.	A	ATAGATG	776.41	PASS	AB=0.869;AC=6;AF=0.107;AN=56;BaseQRankSum=0.872;DP=601;FS=4.334;HRun=0;HaplotypeScore=206.0383;InbreedingCoeff=0.4643;MQ=52.48;MQ0=22;MQRankSum=-5.965;QD=14.65;ReadPosRankSum=-1.433;VQSLOD=2.9860;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:53:99:0,135,2508	0/0:6,0:6:11.98:0,12,123	0/0:32,0:9:27.05:0,27,518	0/0:32,0:8:17.44:0,17,353	0/0:15,0:15:45.15:0,45,926	0/0:22,0:22:57.19:0,57,1123	0/0:22,0:22:57.19:0,57,1057	0/0:30,0:29:84.27:0,84,1619	0/0:30,0:28:69.08:0,69,1157	0/0:20,0:18:54.14:0,54,1123	0/0:10,0:10:24.08:0,24,488	0/0:25,0:25:63.21:0,63,1233	0/0:19,0:19:48.15:0,48,897	0/0:14,0:13:29.79:0,30,492	0/0:34,0:34:89.97:0,90,1382	0/0:25,0:25:65.94:0,66,974	0/0:16,0:16:39.60:0,40,746	0/0:26,0:26:52.69:0,53,955	0/1:14,1:12:11.06:378,0,11	1/1:8,0:8:3.01:89,3,0	1/1:13,1:13:3.47:50,3,0	0/0:20,0:18:45.15:0,45,939	0/0:9,0:9:21.07:0,21,449	0/0:38,0:38:99:0,99,1861	0/0:10,0:10:24.08:0,24,503	0/0:27,0:27:79.51:0,80,1480	0/1:12,3:15:34.45:375,0,34	0/0:12,0:12:27.09:0,27,525
chr10	55004362	.	ATGTG	A	1280.85	PASS	AB=0.791;AC=30;AF=0.682;AN=44;BaseQRankSum=1.419;DP=655;FS=8.098;HRun=0;HaplotypeScore=102.4875;InbreedingCoeff=0.4439;MQ=59.90;MQ0=49;MQRankSum=-0.767;QD=3.71;ReadPosRankSum=0.721;VQSLOD=1.5051;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:14.84:0,15,200	1/1:12,0:12:3.59:10,4,0	./.	./.	0/1:23,6:30:1.18:56,0,1	1/1:16,1:18:7.83:79,8,0	./.	0/0:24,0:24:2.49:0,2,6	./.	1/1:19,0:22:7.10:80,7,0	1/1:11,6:17:5.47:91,5,0	1/1:20,3:24:6.01:74,6,0	1/1:12,3:15:6.02:92,6,0	0/0:12,0:12:0.47:0,0,1	1/1:12,7:20:9.03:135,9,0	0/0:16,0:14:15.02:0,15,231	1/1:23,9:32:15.05:219,15,0	1/1:15,3:18:12.03:165,12,0	1/1:21,0:26:6.01:56,6,0	./.	./.	0/0:15,2:17:2.74:0,3,12	0/0:18,0:17:9.03:0,9,178	0/1:19,2:27:16.50:37,0,16	1/1:14,0:15:15.03:199,15,0	1/1:18,0:19:6.01:56,6,0	1/1:22,0:27:2.53:27,3,0	1/1:19,1:16:0.69:42,1,0
chr10	55005098	.	AG	A	4414.14	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=7.480;DP=796;FS=0.000;HRun=1;HaplotypeScore=92.3479;InbreedingCoeff=1.0000;MQ=82.20;MQ0=0;MQRankSum=-0.764;QD=38.72;ReadPosRankSum=0.397;VQSLOD=5.0326;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:66,0:66:99:0,199,3126	0/0:16,0:16:48.15:0,48,741	0/0:26,0:26:75.23:0,75,1136	0/0:18,0:18:51.17:0,51,761	0/0:24,0:24:72.25:0,72,1147	0/0:30,0:30:90.29:0,90,1413	0/0:34,0:34:99:0,99,1518	0/0:33,0:33:96.31:0,96,1485	0/0:30,0:30:90.31:0,90,1434	0/0:30,0:30:90.29:0,90,1399	0/0:15,0:15:45.15:0,45,719	0/0:25,0:25:75.26:0,75,1199	0/0:26,0:26:78.20:0,78,1150	0/0:35,0:35:99:0,105,1650	0/0:33,0:32:96.33:0,96,1532	0/0:34,0:34:99:0,102,1605	0/0:36,0:36:99:0,108,1715	0/0:27,0:27:78.25:0,78,1222	1/1:0,25:25:75.23:1016,75,0	1/1:0,19:19:54.18:755,54,0	1/1:1,37:38:99:1426,102,0	0/0:28,0:28:84.29:0,84,1340	0/0:16,0:16:48.15:0,48,744	0/0:31,0:31:90.28:0,90,1408	0/0:25,0:25:75.26:0,75,1197	0/0:27,0:27:81.28:0,81,1295	1/1:0,32:32:87.29:1216,87,0	0/0:17,0:17:51.17:0,51,814
chr10	55011170	.	A	AT	15126.31	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-8.905;DP=713;FS=5.801;HRun=6;HaplotypeScore=81.3482;InbreedingCoeff=0.9997;MQ=89.91;MQ0=0;MQRankSum=-3.731;QD=31.32;ReadPosRankSum=3.327;VQSLOD=5.3634;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,49:50:99:1623,129,0	0/0:13,0:13:36.08:0,36,367	0/0:27,0:27:46.35:0,46,644	0/0:29,0:30:55.79:0,56,632	1/1:2,21:23:51.16:641,51,0	1/1:7,31:37:50.65:951,51,0	1/1:3,13:16:33.11:415,33,0	1/1:0,23:23:69.20:853,69,0	1/1:1,15:16:27.09:340,27,0	1/1:0,18:18:51.14:627,51,0	1/1:5,23:28:60.19:755,60,0	1/1:2,18:20:54.17:679,54,0	1/1:1,24:25:63.20:793,63,0	1/1:1,26:27:75.24:944,75,0	1/1:0,20:20:54.17:679,54,0	0/0:28,0:28:72.11:0,72,718	1/1:3,25:28:69.22:868,69,0	1/1:2,17:19:48.13:588,48,0	0/0:25,0:25:60.09:0,60,601	0/0:36,0:36:96.21:0,96,979	0/0:39,0:39:99:0,117,1193	1/1:1,24:25:66.21:825,66,0	1/1:0,24:24:54.17:679,54,0	1/1:0,24:24:63.20:793,63,0	1/1:1,13:13:36.12:453,36,0	1/1:1,28:29:84.27:1056,84,0	0/0:32,0:32:81.13:0,81,810	1/1:1,15:16:45.14:566,45,0
chr10	55013023	.	TC	T	10322.83	PASS	AB=0.902;AC=54;AF=0.964;AN=56;BaseQRankSum=-3.801;DP=506;FS=1.089;HRun=5;HaplotypeScore=133.4725;InbreedingCoeff=-0.0370;MQ=72.87;MQ0=0;MQRankSum=-3.917;QD=20.40;ReadPosRankSum=3.312;VQSLOD=3.2484;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:32,5:36:89.36:794,89,0	1/1:4,2:6:17.55:132,18,0	0/1:15,3:18:74.95:75,0,104	0/1:16,1:15:31.59:32,0,89	1/1:6,10:16:32.56:210,33,0	1/1:12,7:19:51.17:382,51,0	1/1:16,4:20:55.75:512,56,0	1/1:13,7:20:53.49:476,53,0	1/1:18,6:24:54.67:460,55,0	1/1:10,3:13:35.49:318,35,0	1/1:6,2:8:22.38:164,22,0	1/1:12,5:17:46.88:415,47,0	1/1:11,5:16:46.02:375,46,0	1/1:11,5:16:43.63:389,44,0	1/1:9,7:16:42.85:340,43,0	1/1:11,3:14:37.94:329,38,0	1/1:16,8:24:57.10:481,57,0	1/1:15,4:19:50.38:475,50,0	1/1:6,8:14:38.38:303,38,0	1/1:12,6:18:46.04:348,46,0	1/1:20,5:25:50.95:464,51,0	1/1:12,3:15:35.17:295,35,0	1/1:5,8:13:26.39:177,26,0	1/1:26,3:29:74.88:669,75,0	1/1:11,4:15:44.02:364,44,0	1/1:19,10:29:78.30:624,78,0	1/1:16,4:20:59.21:528,59,0	1/1:7,0:7:21:191,21,0
chr10	55013030	.	T	TG	5689.14	PASS	AB=1.000;AC=52;AF=0.929;AN=56;BaseQRankSum=2.474;DP=528;FS=1.780;HRun=0;HaplotypeScore=160.9316;InbreedingCoeff=0.3567;MQ=73.53;MQ0=0;MQRankSum=-1.807;QD=11.24;ReadPosRankSum=7.097;VQSLOD=5.0983;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:35,1:35:80.58:479,81,0	1/1:6,0:6:12.41:58,12,0	0/0:21,0:22:9.44:0,9,251	0/1:21,0:18:29.08:29,0,91	0/1:17,0:17:17.29:47,0,17	1/1:20,0:20:44.77:207,45,0	1/1:25,0:25:42.21:341,42,0	1/1:20,0:20:19.46:185,19,0	1/1:23,0:23:31.41:220,31,0	1/1:15,0:15:13.02:166,13,0	1/1:9,0:9:10.51:79,11,0	1/1:17,0:17:34.61:280,35,0	1/1:17,0:17:37.48:209,37,0	1/1:18,0:18:42.48:248,42,0	1/1:15,0:15:24.45:197,24,0	1/1:14,1:15:25.79:179,26,0	1/1:25,0:25:41.76:291,42,0	1/1:17,2:19:46.29:328,46,0	1/1:11,0:11:30.10:160,30,0	1/1:20,0:20:5.80:137,6,0	1/1:22,0:22:45.96:259,46,0	1/1:18,0:18:9.23:163,9,0	1/1:14,0:14:23.60:106,24,0	1/1:29,0:29:67.67:404,68,0	1/1:17,0:17:37.20:204,37,0	1/1:29,0:29:38.58:285,39,0	1/1:21,0:21:45.43:314,45,0	1/1:7,0:7:19.80:115,20,0
chr10	55013032	.	G	GT	16489.26	PASS	AB=0.904;AC=54;AF=0.964;AN=56;BaseQRankSum=-4.421;DP=535;FS=0.903;HRun=3;HaplotypeScore=122.0893;InbreedingCoeff=-0.0378;MQ=72.42;MQ0=1;MQRankSum=-5.754;QD=30.82;ReadPosRankSum=3.616;VQSLOD=4.0168;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:31,5:35:99:1213,99,0	1/1:4,2:6:15.02:171,15,0	0/1:21,3:23:99:163,0,291	0/1:21,2:19:47.73:114,0,48	1/1:6,11:17:38.76:391,39,0	1/1:13,8:21:60:665,60,0	1/1:20,5:25:75.07:894,75,0	1/1:8,9:17:51.12:644,51,0	1/1:16,7:23:66.10:829,66,0	1/1:10,5:15:45.11:582,45,0	1/1:6,3:9:26.98:315,27,0	1/1:14,3:17:51.03:596,51,0	1/1:12,5:17:51.02:589,51,0	1/1:14,3:17:51.04:613,51,0	1/1:10,5:15:44.96:492,45,0	1/1:12,2:14:42.03:516,42,0	1/1:16,9:25:75.04:890,75,0	1/1:17,4:21:56.87:632,57,0	1/1:6,8:14:35.87:369,36,0	1/1:16,6:22:50.38:574,50,0	1/1:17,5:22:57.18:743,57,0	1/1:13,4:17:50.67:632,51,0	1/1:7,8:15:41.88:440,42,0	1/1:26,3:29:81.04:1010,81,0	1/1:12,5:17:45.02:503,45,0	1/1:17,12:29:81.05:933,81,0	1/1:18,3:21:62.87:720,63,0	1/1:6,1:7:21.05:256,21,0
chr10	55013319	.	C	CG	4292	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-11.508;DP=648;FS=3.921;HRun=6;HaplotypeScore=64.4626;InbreedingCoeff=0.9721;MQ=87.32;MQ0=1;MQRankSum=-1.367;QD=31.10;ReadPosRankSum=0.724;VQSLOD=5.4717;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,132,1322	1/1:2,3:5:6.01:63,6,0	0/0:19,0:19:44.76:0,45,445	0/0:25,0:25:56.78:0,57,532	0/0:14,0:14:33.96:0,34,339	0/0:15,0:15:39.08:0,39,392	0/0:24,0:24:66.14:0,66,668	0/0:12,0:12:30.07:0,30,306	0/0:31,0:31:81.18:0,81,826	0/0:21,0:21:57.12:0,57,577	0/0:12,0:12:29.65:0,30,285	0/0:26,0:26:66.14:0,66,673	0/0:18,0:18:51.12:0,51,520	0/0:32,0:32:81.18:0,81,826	0/0:23,0:23:66.15:0,66,673	1/1:2,25:27:72.23:906,72,0	0/0:34,0:34:99:0,99,1010	0/0:32,0:32:90.20:0,90,918	1/1:3,12:15:36.06:421,36,0	1/1:0,11:12:30.10:376,30,0	1/1:4,56:59:99:1884,153,0	0/0:14,0:14:12.25:0,12,312	0/0:18,0:18:34.88:0,35,341	0/0:28,0:28:81.18:0,81,826	0/0:19,0:19:42.09:0,42,428	0/0:24,0:24:66.05:0,66,640	1/1:0,19:19:51.16:642,51,0	0/0:16,0:16:42.09:0,42,428
chr10	55014143	.	TA	T	691.18	PASS	AB=0.824;AC=11;AF=0.229;AN=48;BaseQRankSum=3.764;DP=200;FS=2.532;HRun=1;HaplotypeScore=43.3169;InbreedingCoeff=-0.3485;MQ=68.28;MQ0=4;MQRankSum=0.419;QD=5.05;ReadPosRankSum=1.245;VQSLOD=0.7367;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:4:11.57:0,12,65	./.	0/0:7,0:6:18:0,18,208	0/0:3,0:3:6.02:0,6,90	0/1:6,2:8:37.77:75,0,38	0/1:8,3:11:42.84:110,0,43	0/1:4,0:4:14.65:42,0,15	0/0:20,0:18:48.52:0,49,255	0/1:8,2:10:7.49:7,0,81	0/1:11,1:11:26.02:26,0,70	0/1:6,1:7:6.73:7,0,49	0/0:3,0:3:8.51:0,9,45	./.	0/0:5,0:5:14.11:0,14,70	0/0:5,0:5:14.45:0,14,83	0/0:1,0:1:3:0,3,25	0/1:15,6:17:70.68:133,0,71	0/1:9,8:14:44.20:118,0,44	0/0:2,0:1:3:0,3,27	0/0:1,0:1:2.98:0,3,22	./.	0/0:7,0:7:15.54:0,16,76	0/0:2,0:2:5.68:0,6,27	0/0:2,0:2:5.68:0,6,27	0/1:17,5:22:74.14:181,0,74	0/1:6,2:8:29.30:29,0,43	./.	0/1:12,5:17:85:94,0,85
chr10	55014145	.	TTTA	T	689.06	PASS	AB=0.804;AC=10;AF=0.238;AN=42;BaseQRankSum=8.901;DP=193;FS=0.000;HRun=0;HaplotypeScore=55.0589;InbreedingCoeff=-0.3593;MQ=63.42;MQ0=5;MQRankSum=0.553;QD=5.30;ReadPosRankSum=5.659;VQSLOD=1.3280;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:4:12.01:0,12,194	./.	0/0:5,0:4:12.02:0,12,131	0/0:3,0:3:3.01:0,3,35	0/1:7,2:9:45.78:46,0,49	0/1:7,3:10:55.10:99,0,55	0/0:2,0:2:5.72:0,6,29	0/0:21,0:19:38.46:0,38,255	0/1:8,2:10:25.51:26,0,97	0/1:11,1:11:8.36:8,0,84	0/1:6,1:7:22.14:22,0,54	0/0:3,0:3:8.58:0,9,43	./.	0/0:5,0:5:14.34:0,14,76	0/0:5,0:5:14.85:0,15,225	./.	0/1:15,6:17:99:144,0,104	0/1:9,8:14:52.37:182,0,52	./.	./.	./.	0/0:7,0:7:16.98:0,17,86	0/0:2,0:2:5.75:0,6,30	0/0:2,0:2:5.75:0,6,30	0/1:14,5:19:97.61:146,0,98	0/1:6,2:8:13.53:14,0,53	./.	0/1:12,5:17:99:129,0,117
chr10	55024247	.	TACAC	T	64.89	PASS	AB=1.000;AC=5;AF=0.417;AN=12;BaseQRankSum=0.000;DP=235;FS=3.680;HRun=0;HaplotypeScore=13.8778;MQ=14.80;MQ0=183;MQRankSum=1.300;QD=4.06;ReadPosRankSum=0.550;VQSLOD=0.6636;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	1/1:0,3:3:6.02:93,6,0	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	1/1:5,3:3:3.01:47,3,0	./.	./.	./.	./.	0/0:13,0:1:3.01:0,3,65	./.	./.	./.	0/1:5,0:2:0:0,0,0	./.	0/0:8,0:2:4.83:0,5,75	0/0:8,0:5:3.01:0,3,57
chr10	55025089	.	T	TAC	236.83	PASS	AB=0.739;AC=6;AF=0.158;AN=38;BaseQRankSum=-1.221;DP=386;FS=23.335;HRun=0;HaplotypeScore=59.6555;InbreedingCoeff=0.1578;MQ=24.84;MQ0=208;MQRankSum=0.336;QD=2.44;ReadPosRankSum=-0.195;VQSLOD=-0.3079;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:19,2:12:2.86:44,3,0	./.	./.	./.	0/0:8,0:6:3.01:0,3,32	0/0:16,0:7:3.01:0,3,32	0/0:13,0:3:6.02:0,6,64	./.	0/0:15,0:6:6.02:0,6,64	0/0:12,0:7:15.48:0,15,143	./.	0/0:8,0:3:0:0,0,0	0/0:9,0:4:3.01:0,3,32	0/0:13,0:7:8.98:0,9,83	0/0:19,0:9:6.01:0,6,62	./.	0/1:16,8:19:13.93:196,0,14	0/1:17,5:16:51.93:76,0,52	0/0:10,0:2:5.99:0,6,54	0/0:8,0:6:5.81:0,6,34	1/1:23,0:13:2.97:20,3,0	0/0:11,0:4:0:0,0,0	0/0:9,0:4:5.82:0,6,34	0/0:15,0:10:2.96:0,3,31	0/0:14,0:10:3.01:0,3,32	./.	./.	./.
chr10	55026146	.	T	TTGGATGGATGGATGGATGGA	31901.75	PASS	AB=1.000;AC=47;AF=0.839;AN=56;BaseQRankSum=-6.575;DP=771;FS=16.360;HRun=0;HaplotypeScore=348.5026;InbreedingCoeff=0.5319;MQ=64.41;MQ0=6;MQRankSum=-8.138;QD=47.54;ReadPosRankSum=-1.533;VQSLOD=2.6668;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:33,0:32:39.08:1040,39,0	1/1:7,0:6:9.03:298,9,0	0/0:39,0:28:19.46:0,19,473	0/0:32,0:25:18.01:0,18,325	1/1:9,15:25:4.62:265,5,0	1/1:29,0:29:48.16:2709,48,0	1/1:33,0:32:48.16:1783,48,0	1/1:47,0:42:73.43:1335,73,0	1/1:18,11:30:27.09:2194,27,0	1/1:27,0:26:54.18:2949,54,0	1/1:23,0:23:27:1077,27,0	1/1:9,10:20:21.07:1646,21,0	1/1:20,10:30:24.08:1774,24,0	1/1:15,14:32:24.08:2088,24,0	1/1:16,10:28:36.12:2533,36,0	1/1:20,0:28:33.11:1388,33,0	1/1:28,0:28:33.09:1364,33,0	1/1:13,0:13:21.05:881,21,0	0/1:24,0:24:56.97:57,0,57	0/1:23,0:23:71.65:72,0,1170	0/1:61,0:61:30.07:30,0,2409	1/1:32,0:32:33.03:1544,33,0	1/1:19,0:19:20.73:615,21,0	1/1:10,17:31:6.02:409,6,0	1/1:15,0:15:21.05:812,21,0	1/1:27,0:27:45.08:2419,45,0	0/0:29,0:29:25:0,25,1355	1/1:5,0:5:9.03:619,9,0
chr10	55026177	.	G	GAT	337.72	PASS	AB=0.955;AC=11;AF=0.196;AN=56;BaseQRankSum=3.103;DP=658;FS=4.474;HRun=0;HaplotypeScore=146.9644;InbreedingCoeff=-0.2273;MQ=57.27;MQ0=9;MQRankSum=-2.126;QD=1.41;ReadPosRankSum=-6.738;VQSLOD=0.0745;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:38,0:37:13.68:14,0,952	0/1:4,1:5:13.41:13,0,72	0/0:44,0:27:77.21:0,77,1170	0/0:40,0:29:71.41:0,71,1091	0/0:17,0:17:20.77:0,21,334	0/0:27,0:27:54.18:0,54,976	0/0:25,0:24:12.23:0,12,513	0/1:55,0:49:99:186,0,1110	0/0:17,0:17:27.97:0,28,614	0/0:28,0:28:48.03:0,48,1037	0/1:20,0:20:50.38:50,0,485	0/0:17,0:17:22.38:0,22,695	0/0:15,0:15:7.79:0,8,448	0/1:13,0:12:0.81:1,0,311	0/0:24,0:23:40:0,40,807	0/1:8,8:16:99:156,0,124	0/1:21,0:21:19.19:19,0,514	0/1:13,0:13:6.73:7,0,433	0/1:14,0:14:3.64:4,0,191	0/0:26,0:26:9.46:0,9,320	0/0:43,0:43:75.37:0,75,662	0/1:26,0:26:9.42:9,0,499	0/1:19,0:19:13.61:14,0,368	0/0:13,0:13:9.97:0,10,296	0/0:12,0:12:8.22:0,8,341	0/0:25,0:25:24.65:0,25,778	0/0:32,0:32:65.16:0,65,517	0/0:13,0:13:39.13:0,39,628
chr10	55026178	.	G	GGATGGATGGA	2907.52	PASS	AB=0.979;AC=23;AF=0.411;AN=56;BaseQRankSum=11.497;DP=651;FS=6.606;HRun=0;HaplotypeScore=235.2453;InbreedingCoeff=-0.6904;MQ=57.20;MQ0=9;MQRankSum=-5.617;QD=5.86;ReadPosRankSum=-3.863;VQSLOD=1.3639;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:36,0:35:99:158,0,1040	0/1:4,1:5:80.57:117,0,81	0/0:42,0:27:23.03:0,23,1512	0/0:38,0:28:73.36:0,73,1477	0/0:17,0:17:20.31:0,20,413	0/1:28,0:28:28.12:28,0,1020	0/1:25,0:24:99:193,0,621	0/1:52,0:46:99:134,0,1116	0/1:17,0:17:55.96:56,0,674	0/1:28,0:28:92.73:93,0,1012	0/1:20,0:20:10.44:10,0,639	0/1:18,0:18:99:140,0,844	0/1:15,0:15:99:160,0,534	0/1:13,0:12:99:167,0,331	0/1:24,0:23:40.89:41,0,979	0/1:9,8:17:67.57:1231,0,68	0/1:20,0:20:86.72:87,0,363	0/1:13,0:13:99:134,0,425	0/1:14,0:14:27.81:28,0,240	0/1:26,0:26:25.36:25,0,813	0/0:43,0:43:61.39:0,61,1723	0/1:27,0:27:41.60:42,0,541	0/1:19,0:19:53.01:53,0,462	0/1:13,0:13:71.29:71,0,321	0/1:10,0:10:47.29:47,0,394	0/1:24,0:24:38.56:39,0,878	0/1:32,0:32:12.56:13,0,1053	0/0:13,0:13:39.09:0,39,774
chr10	55026390	.	GTGTTTT	G	904.55	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=3.836;DP=587;FS=0.000;HRun=0;HaplotypeScore=183.9109;InbreedingCoeff=0.9802;MQ=69.46;MQ0=6;MQRankSum=-4.327;QD=45.23;ReadPosRankSum=-0.064;VQSLOD=3.3866;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:57.12:0,57,927	1/1:1,8:10:21.03:450,21,0	0/0:42,0:27:69.71:0,70,1248	0/0:36,0:15:22.10:0,22,387	0/0:28,0:28:77.23:0,77,1234	0/0:17,0:17:42.14:0,42,675	0/0:14,0:14:42.12:0,42,669	0/0:26,0:25:72.23:0,72,1289	0/0:16,0:16:44.75:0,45,733	0/0:16,0:15:42.11:0,42,601	0/0:12,0:12:36.01:0,36,486	0/0:20,0:19:57.12:0,57,928	0/0:8,0:8:24.08:0,24,402	0/0:16,0:15:36.03:0,36,491	0/0:20,0:19:48.08:0,48,773	1/1:0,10:10:24.08:574,24,0	0/0:38,0:38:97.06:0,97,949	0/0:21,0:21:57.14:0,57,617	0/0:23,0:24:27.31:0,27,301	0/0:42,0:42:42.47:0,42,247	0/0:10,0:10:14.45:0,14,69	0/0:17,0:17:45.14:0,45,748	0/0:22,0:22:57.03:0,57,876	0/0:21,0:20:54.15:0,54,854	0/0:22,0:22:54.15:0,54,845	0/0:24,0:23:66.14:0,66,1065	0/0:25,0:25:49.40:0,49,290	0/0:6,0:6:18.06:0,18,313
chr10	55026392	.	GTT	G	6767.17	PASS	AB=0.748;AC=51;AF=0.911;AN=56;BaseQRankSum=-3.335;DP=589;FS=4.498;HRun=14;HaplotypeScore=120.5218;InbreedingCoeff=0.3506;MQ=69.23;MQ0=8;MQRankSum=-3.353;QD=12.24;ReadPosRankSum=5.706;VQSLOD=3.6997;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,19:24:50.78:456,51,0	1/1:9,0:9:16.62:79,17,0	0/1:42,0:27:2.89:3,0,329	0/0:34,0:15:8.71:0,9,89	0/1:8,15:28:18.40:299,0,18	1/1:2,13:17:35.49:301,35,0	1/1:2,12:14:36.03:333,36,0	0/1:14,11:24:27.60:194,0,28	1/1:2,12:16:32.23:319,32,0	1/1:4,11:15:29.48:245,29,0	1/1:1,9:12:26.46:218,26,0	1/1:5,15:19:16.36:393,16,0	1/1:2,5:8:7.88:129,8,0	1/1:2,13:16:26.47:218,26,0	1/1:2,17:19:26.79:297,27,0	1/1:10,0:10:22.38:106,22,0	1/1:8,1:40:66.69:308,67,0	1/1:1,0:21:49.39:213,49,0	1/1:10,0:24:35.45:155,35,0	1/1:6,0:40:88.06:372,88,0	1/1:3,0:10:10.94:48,11,0	1/1:2,14:17:38.97:361,39,0	1/1:5,16:21:26.98:273,27,0	1/1:3,19:21:47.78:428,48,0	1/1:5,15:21:41.71:370,42,0	1/1:6,17:23:41.97:427,42,0	1/1:9,0:25:36.24:164,36,0	1/1:2,2:6:2.58:59,3,0
chr10	55028571	.	TG	T	2063.19	PASS	AB=0.981;AC=10;AF=0.179;AN=56;BaseQRankSum=-8.618;DP=479;FS=12.029;HRun=9;HaplotypeScore=87.5127;InbreedingCoeff=0.6521;MQ=80.44;MQ0=0;MQRankSum=2.023;QD=14.53;ReadPosRankSum=4.204;VQSLOD=2.5376;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:26:23.21:0,23,153	0/0:9,0:9:24.07:0,24,277	0/1:24,1:26:90.10:90,0,204	0/1:19,0:18:48.98:49,0,223	0/0:3,0:10:11.54:0,12,67	0/0:16,0:20:11.63:0,12,66	0/0:8,0:17:22.83:0,23,116	0/0:8,0:14:23.08:0,23,139	0/0:11,0:17:14.37:0,14,92	0/0:10,0:15:11.24:0,11,57	0/0:9,0:11:8.61:0,9,48	0/0:6,0:20:20.04:0,20,110	0/0:2,0:11:14.32:0,14,77	0/0:6,0:12:14.20:0,14,72	0/0:1,0:12:25.73:0,26,150	0/0:20,0:20:45.09:0,45,490	0/0:11,0:27:37.20:0,37,193	0/0:1,0:11:22.96:0,23,124	1/1:5,11:16:4.39:295,4,0	1/1:4,15:18:44.87:391,45,0	1/1:7,34:41:99:906,99,0	0/0:8,0:19:22.76:0,23,116	0/0:5,0:12:14.40:0,14,85	0/0:4,0:13:20.51:0,21,113	0/0:4,0:16:11.43:0,11,58	0/0:9,0:12:11.41:0,11,64	1/1:0,21:21:54.03:494,54,0	0/0:4,0:13:14.47:0,14,84
chr10	55028719	.	GC	G	10858.97	PASS	AB=0.906;AC=54;AF=0.964;AN=56;BaseQRankSum=-4.679;DP=593;FS=20.178;HRun=9;HaplotypeScore=73.2201;InbreedingCoeff=0.0170;MQ=78.93;MQ0=7;MQRankSum=-6.268;QD=18.31;ReadPosRankSum=4.106;VQSLOD=3.7748;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,31:35:84.04:768,84,0	1/1:3,7:10:21.01:192,21,0	0/1:19,6:23:98.02:98,0,115	0/1:21,0:21:9.21:9,0,318	1/1:2,17:19:45.02:411,45,0	1/1:1,29:30:81.04:740,81,0	1/1:6,26:28:63.02:576,63,0	1/1:1,17:17:45.02:411,45,0	1/1:2,22:24:65.02:567,65,0	1/1:3,17:20:48:432,48,0	1/1:4,14:18:39.02:356,39,0	1/1:0,22:23:59.07:528,59,0	1/1:1,15:16:38.91:357,39,0	1/1:2,21:22:60.03:549,60,0	1/1:3,12:15:35.61:312,36,0	1/1:2,13:15:33.02:302,33,0	1/1:7,25:30:69.03:631,69,0	1/1:0,8:8:24.01:220,24,0	1/1:13,0:13:1.81:76,2,0	1/1:13,0:13:23.38:136,23,0	1/1:29,0:29:1.89:152,2,0	1/1:2,26:28:72.04:658,72,0	1/1:1,10:11:27.01:247,27,0	1/1:5,32:36:78.04:714,78,0	1/1:2,23:25:60.03:549,60,0	1/1:8,22:30:65.99:591,66,0	1/1:16,0:16:11.42:166,11,0	1/1:0,4:4:12.01:110,12,0
chr10	55028937	.	CAGAGAG	C	3759.25	PASS	AB=0.923;AC=40;AF=0.769;AN=52;BaseQRankSum=-2.146;DP=653;FS=40.442;HRun=0;HaplotypeScore=176.2223;InbreedingCoeff=0.1503;MQ=53.49;MQ0=10;MQRankSum=-0.365;QD=6.47;ReadPosRankSum=1.560;VQSLOD=1.5351;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:46,4:50:30.95:215,31,0	0/1:7,0:7:3.60:4,0,13	./.	./.	0/1:20,0:23:16.72:17,0,32	1/1:20,3:22:11.44:78,11,0	1/1:24,0:22:20.28:155,20,0	1/1:29,0:25:14.90:126,15,0	1/1:17,0:18:19.20:143,19,0	1/1:29,2:32:29.58:459,30,0	0/1:20,1:20:21.45:22,0,21	1/1:20,3:23:15.94:289,16,0	0/1:21,2:25:18.34:258,0,18	1/1:25,4:30:14.75:180,15,0	1/1:25,4:31:39.32:325,39,0	1/1:12,0:12:5.93:41,6,0	1/1:31,0:31:37.78:319,38,0	0/1:20,0:20:6:170,0,6	0/1:16,0:15:14.41:14,0,53	0/0:25,0:24:23.63:0,24,232	0/0:21,0:20:12:0,12,123	1/1:20,3:23:23.28:160,23,0	0/1:19,1:23:22.87:95,0,23	1/1:40,2:42:15.47:159,15,0	1/1:16,0:15:10.15:51,10,0	1/1:28,3:32:20.53:414,21,0	1/1:13,0:13:2.59:10,3,0	0/1:12,2:14:25.67:56,0,26
chr10	55028971	.	GACAGAGACAGAGAGAGAGACAGAGAGAC	G	1468.85	PASS	AB=0.885;AC=10;AF=0.179;AN=56;BaseQRankSum=-2.716;DP=601;FS=10.027;HRun=0;HaplotypeScore=399.8903;InbreedingCoeff=0.6654;MQ=47.40;MQ0=17;MQRankSum=-0.205;QD=16.14;ReadPosRankSum=-3.974;VQSLOD=0.3753;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:62,0:60:59.52:0,60,2973	0/0:4,0:7:5.13:0,5,42	0/0:2,0:2:6.02:0,6,220	0/0:4,0:3:9.03:0,9,201	0/0:23,0:23:33.09:0,33,1300	0/0:24,0:23:35.75:0,36,1139	0/0:22,0:20:43.24:0,43,1456	0/0:28,0:19:42.93:0,43,390	0/0:24,0:24:48.90:0,49,1431	0/0:25,0:26:52.15:0,52,2348	0/0:17,0:15:15.04:0,15,648	0/0:24,0:23:38.16:0,38,2024	0/0:35,0:34:86.25:0,86,3475	0/0:27,0:26:47.93:0,48,1650	0/0:33,0:32:60.82:0,61,1959	0/1:7,0:10:7.58:53,0,8	0/1:24,0:24:84.33:84,0,1214	0/0:17,0:17:17.05:0,17,657	1/1:3,10:14:34.30:713,34,0	1/1:22,0:21:26.74:369,27,0	1/1:15,0:14:15:200,15,0	0/0:22,0:22:38.98:0,39,1221	0/0:16,0:16:27.04:0,27,797	0/0:41,0:40:55.28:0,55,2642	0/0:11,0:10:18.04:0,18,598	0/0:29,0:29:40.72:0,41,2698	1/1:3,2:5:3.01:208,3,0	0/0:16,0:15:33.58:0,34,1158
chr10	55028975	.	GAGAC	G	1126.75	PASS	AB=1.000;AC=20;AF=0.357;AN=56;BaseQRankSum=-3.085;DP=589;FS=0.000;HRun=0;HaplotypeScore=193.7659;InbreedingCoeff=-0.0168;MQ=48.63;MQ0=14;MQRankSum=-3.310;QD=3.49;ReadPosRankSum=-0.798;VQSLOD=2.3221;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:61,0:59:9.90:0,10,494	0/0:6,2:8:0.60:0,1,18	0/0:5,0:4:11.87:0,12,180	0/0:7,0:5:11.77:0,12,206	0/0:23,0:23:26.22:0,26,250	0/0:22,0:21:26.08:0,26,271	0/0:21,0:20:8.47:0,8,334	0/0:27,0:20:7.23:0,7,287	0/1:24,0:24:20.43:20,0,299	0/1:28,0:28:99:207,0,357	0/0:17,0:15:11.47:0,11,117	0/1:26,0:26:54.11:54,0,322	0/1:34,0:33:59:59,0,547	0/0:25,0:24:13.72:0,14,327	0/1:31,0:30:23.59:24,0,375	1/1:8,3:11:7.98:73,8,0	1/1:23,0:23:29.45:307,29,0	1/1:17,0:17:15.90:268,16,0	0/1:13,0:13:11.51:72,0,12	0/1:15,0:15:25.35:25,0,37	0/1:16,0:15:16.94:19,0,17	0/1:22,0:22:16.75:17,0,240	0/1:15,0:15:3.74:4,0,153	0/0:40,0:39:14.80:0,15,384	0/0:10,0:9:20.46:0,20,185	0/1:27,0:27:99:107,0,380	1/1:4,0:4:2.96:19,3,0	0/1:17,0:16:22.12:22,0,201
chr10	55028977	.	GAC	G	1497.06	PASS	AB=0.992;AC=29;AF=0.518;AN=56;BaseQRankSum=-3.561;DP=585;FS=12.083;HRun=0;HaplotypeScore=175.9629;InbreedingCoeff=-0.4961;MQ=50.05;MQ0=14;MQRankSum=-1.949;QD=2.67;ReadPosRankSum=-1.423;VQSLOD=1.9487;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:61,0:59:70.17:70,0,129	1/1:6,2:8:2.47:12,2,0	0/0:6,0:5:14.89:0,15,175	0/0:8,0:6:12.03:0,12,194	0/1:23,0:23:17.34:17,0,48	0/1:23,0:22:9.69:17,0,10	0/1:20,0:19:3.09:3,0,70	0/1:26,0:20:14.62:52,0,15	0/1:24,0:24:45:45,0,88	0/1:27,1:28:76.91:300,0,77	0/1:16,0:15:12.12:12,0,57	0/1:27,0:27:58.73:59,0,103	0/1:34,0:33:99:157,0,110	0/1:24,0:23:11.37:11,0,50	0/1:30,0:29:41.65:76,0,42	1/1:8,3:11:10.13:103,10,0	1/1:18,3:22:21.07:198,21,0	0/1:15,1:16:3.28:103,0,3	0/1:13,0:13:15.74:70,0,16	0/1:14,0:14:38.31:38,0,40	0/1:15,0:14:16.94:19,0,17	0/1:22,0:22:46.87:47,0,73	0/1:16,0:16:15.82:16,0,53	0/1:37,3:39:87.17:87,0,112	0/0:10,0:9:9.23:0,9,44	0/1:28,0:28:71.15:71,0,97	1/1:4,0:4:2.96:19,3,0	0/1:15,0:14:20.85:51,0,21
chr10	55028979	.	C	CAG	472.82	PASS	AB=1.000;AC=10;AF=0.179;AN=56;BaseQRankSum=-0.257;DP=582;FS=0.000;HRun=0;HaplotypeScore=183.3056;InbreedingCoeff=0.7181;MQ=51.42;MQ0=15;MQRankSum=-3.633;QD=6.22;ReadPosRankSum=-1.005;VQSLOD=2.6894;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:61,0:59:59.40:0,59,292	0/0:9,0:9:5.25:0,5,32	0/0:7,0:6:14.30:0,14,138	0/0:12,0:8:10.69:0,11,122	0/0:22,0:22:25.22:0,25,135	0/0:23,0:22:24.07:0,24,99	0/0:20,0:19:34.33:0,34,158	0/0:25,0:19:20.46:0,20,97	0/0:24,0:24:30.65:0,31,169	0/0:29,0:29:48.31:0,48,206	0/0:16,0:15:11.59:0,12,74	0/0:23,0:23:41.96:0,42,239	0/0:35,0:34:69.08:0,69,350	0/0:24,0:23:32.98:0,33,161	0/0:30,0:29:38.06:0,38,184	1/1:12,0:12:6.09:48,6,0	1/1:16,6:22:7.43:202,7,0	1/1:7,7:14:20.17:334,20,0	0/0:13,0:13:0.26:0,0,1	0/1:13,0:13:1.46:20,0,1	1/1:11,0:10:0.47:1,0,0	0/0:24,0:24:25.10:0,25,132	0/0:16,0:16:18.49:0,18,106	0/0:41,0:40:43.41:0,43,248	0/0:10,0:9:19.04:0,19,85	0/0:28,0:28:31.43:0,31,238	0/1:4,0:4:0:0,0,0	0/0:14,0:13:24.78:0,25,108
chr10	55028987	.	GAGAC	G	1763.68	PASS	AB=0.990;AC=26;AF=0.464;AN=56;BaseQRankSum=-2.556;DP=593;FS=11.926;HRun=0;HaplotypeScore=191.8106;InbreedingCoeff=0.2342;MQ=55.03;MQ0=14;MQRankSum=-3.000;QD=4.49;ReadPosRankSum=-3.161;VQSLOD=1.1961;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:59,0:58:99:134,0,159	0/0:10,0:10:3:0,3,28	0/0:15,0:13:18.24:0,18,419	0/0:18,0:11:12.69:0,13,321	0/0:22,0:22:16.50:0,17,127	0/0:23,0:22:10.81:0,11,27	0/1:19,0:18:48.56:49,0,69	1/1:29,2:26:6.02:230,6,0	0/1:21,1:22:8:8,0,103	0/1:21,0:21:70.98:75,0,71	0/0:14,0:14:9.98:0,10,88	0/1:23,0:23:7.77:8,0,179	0/0:32,0:31:14.13:0,14,224	0/0:24,1:25:20.09:0,20,97	0/1:29,0:28:2.45:2,0,82	1/1:14,0:14:8.33:81,8,0	1/1:17,0:17:26.44:278,26,0	1/1:16,0:16:39.54:348,40,0	1/1:11,0:11:14.42:102,14,0	1/1:11,0:10:14.97:122,15,0	1/1:14,0:13:5.99:49,6,0	0/0:23,0:23:17.98:0,18,127	0/0:18,0:18:14.05:0,14,125	0/1:41,0:40:56.25:56,0,176	0/1:12,0:11:10.42:10,0,42	0/1:30,2:32:99:290,0,116	1/1:9,0:9:11.78:78,12,0	0/1:12,0:11:31.64:32,0,39
chr10	55028989	.	GAC	G	9043.60	PASS	AB=0.614;AC=37;AF=0.661;AN=56;BaseQRankSum=-4.112;DP=595;FS=15.172;HRun=0;HaplotypeScore=149.3778;InbreedingCoeff=-0.2269;MQ=56.27;MQ0=13;MQRankSum=1.409;QD=16.29;ReadPosRankSum=6.422;VQSLOD=3.8670;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:31,29:59:27.81:878,0,28	1/1:10,0:10:3.39:15,3,0	0/0:20,0:17:22.09:0,22,400	0/0:19,0:12:1.16:0,1,240	0/1:5,15:20:33.95:243,0,34	1/1:5,18:22:27.09:412,27,0	0/1:9,12:20:0.58:524,0,1	1/1:6,25:27:69.01:765,69,0	0/1:8,15:23:38.62:349,0,39	1/1:5,17:22:36.92:719,37,0	0/1:5,7:12:33.80:34,0,56	0/1:6,17:23:74.49:419,0,74	0/1:11,21:31:83.69:700,0,84	0/1:7,18:25:23.81:377,0,24	0/1:6,24:30:9.16:485,0,9	1/1:12,0:12:8.84:95,9,0	1/1:12,4:16:19.40:180,19,0	1/1:16,0:16:20.41:183,20,0	1/1:10,0:10:15.97:97,16,0	1/1:11,0:10:16.53:128,17,0	1/1:13,0:12:5.99:49,6,0	0/1:7,15:22:57.60:202,0,58	0/1:6,12:18:49.77:118,0,50	0/1:26,15:40:82.80:564,0,83	0/1:7,5:12:2.92:274,0,3	0/1:7,23:30:9.23:780,0,9	1/1:10,0:10:13.43:91,13,0	0/1:3,9:11:12.90:362,0,13
chr10	55028991	.	CAGAGAGACAG	C	285.09	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=4.218;DP=601;FS=7.451;HRun=0;HaplotypeScore=246.6722;InbreedingCoeff=0.7265;MQ=57.08;MQ0=14;MQRankSum=-4.753;QD=4.26;ReadPosRankSum=0.665;VQSLOD=1.6341;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:58:92.08:0,92,1343	1/1:7,3:10:5.35:69,5,0	0/0:26,0:22:26.38:0,26,1379	0/0:22,0:13:26.45:0,26,703	0/0:19,0:19:24:0,24,362	0/0:21,0:20:27.09:0,27,481	0/0:22,0:21:52.06:0,52,790	0/0:32,0:29:34.06:0,34,902	0/0:23,0:23:32.47:0,32,508	0/0:23,0:23:24.41:0,24,910	0/0:12,0:12:11.14:0,11,143	0/0:23,0:23:23.21:0,23,503	0/0:32,0:31:55:0,55,933	0/0:25,0:25:36.10:0,36,600	0/0:29,0:28:41.63:0,42,723	1/1:10,3:13:7.46:115,7,0	0/0:16,0:16:8.12:0,8,396	0/0:17,0:17:44.02:0,44,638	1/1:10,0:10:13.90:134,14,0	1/1:11,0:10:6.35:42,6,0	1/1:13,0:12:3:25,3,0	0/0:22,0:22:24.06:0,24,387	0/0:17,0:17:15.01:0,15,195	0/0:41,0:40:61.17:0,61,824	0/0:11,0:11:30.06:0,30,440	0/0:30,0:30:32:0,32,919	0/1:10,0:10:10.03:53,0,10	0/0:12,0:11:4.77:0,5,355
chr10	55028999	.	CAG	C	56.04	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=5.661;DP=634;FS=5.372;HRun=0;HaplotypeScore=190.9809;InbreedingCoeff=0.3688;MQ=60.99;MQ0=14;MQRankSum=-4.549;QD=0.64;ReadPosRankSum=-0.095;VQSLOD=2.4657;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:51:85.74:0,86,960	1/1:3,5:8:2.20:9,2,0	0/0:35,0:27:51.34:0,51,1033	0/0:32,0:20:23.69:0,24,499	0/0:17,0:17:23.54:0,24,192	0/0:25,0:24:42.07:0,42,468	0/0:27,0:26:57.80:0,58,684	0/0:35,0:33:80.73:0,81,1053	0/0:22,0:22:5.84:0,6,210	0/0:23,0:23:25.12:0,25,742	0/0:15,0:15:18.02:0,18,219	0/1:23,0:23:40.32:40,0,360	0/0:27,0:27:12.24:0,12,401	0/0:24,0:24:24.10:0,24,361	0/0:31,0:30:53.81:0,54,646	1/1:9,6:15:8.90:108,9,0	0/0:17,0:17:33.51:0,34,401	0/0:17,0:17:43.54:0,44,610	0/0:10,0:10:1.50:0,1,20	0/0:13,0:12:2.97:0,3,10	0/0:16,0:15:0.94:0,1,2	0/0:20,0:20:18.03:0,18,191	0/0:13,0:13:14.97:0,15,149	0/0:40,0:39:16.25:0,16,507	0/0:13,0:13:33.07:0,33,409	0/1:28,0:28:7.04:7,0,583	0/1:14,0:14:0.57:1,0,15	0/0:21,0:20:15.43:0,15,536
chr10	55029001	.	G	GAC	52.09	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=3.356;DP=654;FS=0.000;HRun=0;HaplotypeScore=198.9025;InbreedingCoeff=0.6796;MQ=61.52;MQ0=13;MQRankSum=-2.076;QD=2.08;ReadPosRankSum=-0.332;VQSLOD=2.1520;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:92.03:0,92,1368	1/1:9,0:9:2.69:17,3,0	0/0:37,0:29:70.78:0,71,993	0/0:35,0:21:10.06:0,10,434	0/0:18,0:18:27.04:0,27,352	0/0:25,0:24:45.12:0,45,639	0/0:26,0:26:64.04:0,64,913	0/0:36,0:34:85.92:0,86,1191	0/0:22,0:22:33.07:0,33,456	0/0:23,0:23:67.74:0,68,948	0/0:17,0:17:24.02:0,24,281	0/0:23,0:23:28.11:0,28,580	0/0:29,0:29:62.67:0,63,885	0/0:25,0:25:39.09:0,39,552	0/0:33,0:32:57.16:0,57,847	1/1:12,4:16:9.24:132,9,0	0/0:17,0:17:35.84:0,36,363	0/0:18,0:18:29.51:0,30,418	0/0:11,0:11:0.30:0,0,70	0/0:13,0:12:14.51:0,15,130	0/0:18,0:17:8.90:0,9,74	0/0:18,0:18:17.98:0,18,275	0/0:15,0:15:15.04:0,15,209	0/0:39,0:38:62.86:0,63,877	0/0:14,0:14:39.09:0,39,529	0/0:28,0:28:77.58:0,78,989	0/0:15,0:15:12.01:0,12,125	0/0:21,0:20:57.11:0,57,776
chr10	55029071	.	CAG	C	38.19	PASS	AB=0.755;AC=2;AF=0.038;AN=52;BaseQRankSum=3.808;DP=759;FS=0.000;HRun=0;HaplotypeScore=194.1110;InbreedingCoeff=-0.0400;MQ=53.09;MQ0=17;MQRankSum=-1.439;QD=1.41;ReadPosRankSum=1.852;VQSLOD=2.6318;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:72,0:71:99:0,129,2106	0/1:7,2:9:30.05:30,0,78	./.	./.	0/0:24,0:24:54.14:0,54,859	0/0:27,0:27:54.66:0,55,910	0/0:29,0:27:45.11:0,45,726	0/0:32,0:26:66.08:0,66,959	0/0:22,0:22:45.15:0,45,754	0/0:28,0:27:72.24:0,72,1190	0/0:20,0:20:48.16:0,48,797	0/0:26,0:26:57.01:0,57,921	0/0:22,0:22:57.18:0,57,939	0/0:21,0:21:45.15:0,45,759	0/0:21,0:21:54.17:0,54,878	0/1:10,8:18:96.25:96,0,151	0/0:30,0:28:47.87:0,48,1044	0/0:33,0:32:79.16:0,79,1215	0/0:21,0:19:45.04:0,45,656	0/0:26,0:25:36.12:0,36,578	0/0:38,0:38:38.15:0,38,658	0/0:27,0:27:61.91:0,62,948	0/0:21,0:21:57.19:0,57,954	0/0:60,0:60:99:0,129,2129	0/0:28,0:28:69.22:0,69,1140	0/0:32,0:31:84.26:0,84,1325	0/0:42,0:42:86.76:0,87,1364	0/0:17,0:16:39.13:0,39,637
chr10	55029144	.	GCACACACA	G	554	PASS	AB=0.923;AC=5;AF=0.089;AN=56;BaseQRankSum=-1.389;DP=729;FS=9.416;HRun=0;HaplotypeScore=247.6408;InbreedingCoeff=0.5633;MQ=59.82;MQ0=8;MQRankSum=2.383;QD=14.21;ReadPosRankSum=-2.214;VQSLOD=1.0872;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:35:72.25:0,72,2719	0/0:8,0:8:14.67:0,15,282	0/0:42,0:21:26.27:0,26,759	0/0:45,0:24:7.75:0,8,929	0/0:42,0:42:99:0,123,4750	0/0:21,0:21:51.18:0,51,1927	0/0:28,0:28:76.01:0,76,2581	0/0:36,0:35:87.30:0,87,2985	0/0:25,0:25:63.20:0,63,2446	0/0:26,0:26:75.24:0,75,2943	0/0:14,0:14:30.10:0,30,1139	0/0:22,0:22:60.21:0,60,2160	0/0:29,0:29:81.28:0,81,2971	0/0:17,0:17:42.04:0,42,1352	0/0:32,0:32:96.31:0,96,3636	0/0:16,0:16:23.92:0,24,536	0/0:28,0:28:69.20:0,69,2481	0/0:22,0:22:60.21:0,60,2191	0/1:11,1:12:40.52:356,0,41	1/1:11,1:12:14.09:261,14,0	1/1:12,3:15:1:49,1,0	0/0:21,0:21:57.18:0,57,1910	0/0:26,0:26:73.13:0,73,2728	0/0:58,0:58:99:0,142,5345	0/0:32,0:33:93.31:0,93,3550	0/0:40,0:40:99:0,105,3974	0/0:14,0:14:2.86:0,3,26	0/0:10,0:10:30.10:0,30,1204
chr10	55029151	.	C	CAGAGAGAGAGAGAGAGAGAG	1338.87	PASS	AB=1.000;AC=10;AF=0.179;AN=56;BaseQRankSum=0.639;DP=719;FS=7.828;HRun=0;HaplotypeScore=401.9233;InbreedingCoeff=0.6946;MQ=59.87;MQ0=8;MQRankSum=0.100;QD=20.60;ReadPosRankSum=-4.066;VQSLOD=0.4501;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:81.16:0,81,3218	0/1:8,0:8:99:137,0,176	0/0:44,0:20:40.99:0,41,1013	0/0:44,0:22:9.13:0,9,1161	0/0:44,0:44:99:0,129,6026	0/0:21,0:21:54.19:0,54,2431	0/0:27,0:27:75.59:0,76,3268	0/0:38,0:36:99:0,102,3646	0/0:26,0:26:66.04:0,66,3204	0/0:30,0:30:90.27:0,90,4084	0/0:11,0:11:33.10:0,33,1499	0/0:23,0:23:66.23:0,66,2756	0/0:30,0:30:87.30:0,87,3826	0/0:18,0:18:45.04:0,45,1856	0/0:34,0:34:99:0,99,4686	0/1:15,0:15:99:103,0,447	0/0:27,0:27:75.24:0,75,3121	0/0:21,0:21:63.19:0,63,2942	1/1:9,0:9:26.95:512,27,0	1/1:10,0:10:15.90:307,16,0	1/1:13,0:13:8.50:106,8,0	0/0:22,0:22:66.21:0,66,2401	0/0:26,0:26:73.14:0,73,3487	0/0:53,0:53:99:0,147,6763	0/0:33,0:33:96.30:0,96,4449	0/0:36,0:36:99:0,108,5124	1/1:3,4:10:6.02:333,6,0	0/0:10,0:10:30.10:0,30,1501
chr10	55032014	.	C	CTTGT	19533.02	PASS	AB=0.779;AC=40;AF=0.714;AN=56;BaseQRankSum=-13.488;DP=699;FS=0.000;HRun=0;HaplotypeScore=116.5766;InbreedingCoeff=0.8094;MQ=74.11;MQ0=1;MQRankSum=-0.005;QD=36.72;ReadPosRankSum=0.708;VQSLOD=4.9989;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,31:44:40.51:1973,41,0	0/0:7,0:14:21.02:0,21,196	0/0:29,0:26:24.01:0,24,320	0/0:23,0:22:19.62:0,20,280	0/1:9,18:28:35.87:1166,0,36	1/1:10,18:28:51.17:1225,51,0	1/1:6,13:19:27.09:649,27,0	1/1:15,3:19:22:407,22,0	1/1:9,17:27:39.13:937,39,0	1/1:15,21:38:72.23:1646,72,0	1/1:9,15:29:54.06:1121,54,0	1/1:11,9:21:27.09:620,27,0	1/1:8,8:16:24.08:576,24,0	1/1:8,12:20:27.09:648,27,0	1/1:8,11:19:30.10:721,30,0	0/1:8,1:26:24.02:24,0,371	1/1:9,24:35:51.18:1225,51,0	1/1:14,14:29:19.20:845,19,0	0/0:15,0:26:31.85:0,32,284	0/0:5,0:23:45.03:0,45,413	0/0:14,0:28:32.16:0,32,306	1/1:9,12:22:33.11:774,33,0	1/1:12,19:31:57.67:1363,58,0	1/1:5,22:29:60.21:1441,60,0	1/1:4,8:12:15.05:360,15,0	1/1:9,20:33:72.20:1595,72,0	0/0:6,0:24:47.73:0,48,431	1/1:3,4:7:9.03:216,9,0
chr10	55033082	.	TA	T	6802.14	PASS	AB=0.917;AC=45;AF=0.804;AN=56;BaseQRankSum=-10.684;DP=409;FS=0.558;HRun=10;HaplotypeScore=53.6803;InbreedingCoeff=0.8127;MQ=74.16;MQ0=0;MQRankSum=-0.692;QD=20.43;ReadPosRankSum=3.417;VQSLOD=5.6415;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,22:23:53.99:468,54,0	1/1:0,4:4:9:78,9,0	0/0:19,0:17:29.92:0,30,275	0/1:9,1:9:11.26:11,0,30	1/1:5,12:17:32.98:287,33,0	1/1:2,15:17:35.99:312,36,0	1/1:1,6:6:18:156,18,0	1/1:5,36:41:99:907,105,0	1/1:1,4:5:12:104,12,0	1/1:2,16:18:47.99:417,48,0	1/1:2,8:10:17.98:156,18,0	1/1:0,14:14:29.99:260,30,0	1/1:0,12:12:26.99:235,27,0	1/1:0,7:7:15:130,15,0	1/1:1,12:13:32.98:287,33,0	1/1:3,12:15:38.99:338,39,0	1/1:2,12:14:29.99:260,30,0	1/1:1,22:23:53.99:469,54,0	0/0:3,0:20:48.67:0,49,250	0/0:1,0:11:29.22:0,29,143	0/0:1,0:6:11.36:0,11,57	1/1:1,2:3:2.99:26,3,0	1/1:0,8:8:21:182,21,0	1/1:2,3:5:9:78,9,0	1/1:0,18:18:47.99:417,48,0	1/1:1,22:23:65.99:573,66,0	0/0:5,1:19:14.18:0,14,157	1/1:0,25:25:74.99:651,75,0
chr10	55034911	.	T	TG	3648.92	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-10.298;DP=681;FS=3.562;HRun=6;HaplotypeScore=64.8077;InbreedingCoeff=0.9946;MQ=86.26;MQ0=0;MQRankSum=-3.440;QD=31.46;ReadPosRankSum=0.333;VQSLOD=4.2279;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:81.16:0,81,819	0/0:11,0:11:30.07:0,30,306	0/0:26,0:26:53.91:0,54,517	0/0:23,0:23:50.99:0,51,486	0/0:28,0:28:75.16:0,75,765	0/0:23,0:23:57.07:0,57,566	0/0:34,0:34:87.19:0,87,888	0/0:19,0:19:45.10:0,45,459	0/0:23,0:23:69.14:0,69,697	0/0:26,0:26:60.11:0,60,603	0/0:19,0:19:51.11:0,51,520	0/0:25,0:25:66.15:0,66,673	0/0:23,0:23:66.15:0,66,673	0/0:27,0:27:72.16:0,72,735	0/0:26,0:26:72.16:0,72,733	0/0:29,0:29:84.19:0,84,857	0/0:41,0:41:99:0,111,1119	0/0:25,0:25:69.15:0,69,704	1/1:3,15:18:48.14:591,48,0	1/1:3,13:16:14.79:492,15,0	1/1:4,45:49:99:1510,120,0	0/0:24,0:24:66.13:0,66,665	0/0:16,0:16:42.09:0,42,428	0/0:18,0:18:48.11:0,48,490	0/0:17,0:17:45.10:0,45,459	0/0:21,0:21:57.13:0,57,581	1/1:4,29:33:84.27:1056,84,0	0/0:8,0:8:24.05:0,24,245
chr10	55038179	.	GAAT	G	1496.79	PASS	AB=1.000;AC=53;AF=0.946;AN=56;BaseQRankSum=-1.510;DP=358;FS=2.991;HRun=0;HaplotypeScore=44.5378;InbreedingCoeff=0.2857;MQ=21.14;MQ0=85;MQRankSum=0.048;QD=4.58;ReadPosRankSum=-0.356;VQSLOD=1.5086;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:12,0:4:5.90:37,6,0	1/1:6,0:6:14.75:93,15,0	1/1:57,0:1:2.04:6,2,0	0/0:31,0:1:2.84:0,3,14	1/1:10,0:7:13.22:74,13,0	1/1:11,0:8:8.89:59,9,0	1/1:12,0:7:17.10:99,17,0	1/1:7,5:8:12.18:74,12,0	1/1:14,0:12:11.42:64,11,0	1/1:16,0:8:17.26:87,17,0	1/1:7,0:5:9.85:43,10,0	1/1:14,0:10:17.43:99,17,0	1/1:5,0:5:2.92:17,3,0	1/1:10,0:9:8.69:48,9,0	1/1:7,0:6:8.81:53,9,0	1/1:11,0:9:14.75:93,15,0	1/1:14,0:3:3.01:35,3,0	1/1:9,0:4:7.47:44,7,0	1/1:6,0:1:2.98:21,3,0	1/1:5,0:5:9.92:45,10,0	1/1:14,0:10:11.77:64,12,0	1/1:15,0:12:15.48:87,15,0	1/1:9,0:9:6.59:80,7,0	1/1:19,0:11:8.72:49,9,0	0/1:7,0:6:0.24:1,0,0	1/1:9,0:6:15.35:92,15,0	1/1:9,0:5:10.66:60,11,0	1/1:7,0:4:8.90:62,9,0
chr10	55038211	.	GGAA	G	1336.47	PASS	AB=0.976;AC=37;AF=0.685;AN=54;BaseQRankSum=-1.678;DP=573;FS=8.831;HRun=0;HaplotypeScore=73.1481;InbreedingCoeff=-0.0185;MQ=24.52;MQ0=144;MQRankSum=2.364;QD=2.74;ReadPosRankSum=-0.378;VQSLOD=0.7195;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:14:3.74:87,4,0	1/1:15,0:13:9.67:71,10,0	./.	0/0:16,0:1:2.99:0,3,23	0/1:10,0:4:0:0,0,0	1/1:18,0:13:13.45:86,13,0	1/1:40,1:17:10.03:156,10,0	1/1:19,0:11:9.74:56,10,0	0/1:16,9:15:1.35:33,0,1	1/1:19,1:12:16.48:133,16,0	0/1:11,0:6:4.91:19,0,5	1/1:23,2:17:23.27:165,23,0	0/1:15,0:13:2.34:9,0,2	0/1:15,0:9:5.32:41,0,5	0/1:20,0:8:5.04:8,0,5	1/1:25,0:19:13.94:60,14,0	0/1:28,0:13:19.74:64,0,20	0/1:20,0:10:8.43:70,0,8	1/1:22,0:12:8.80:127,9,0	0/0:12,0:7:0.47:0,0,1	0/0:33,0:21:0.64:0,1,19	1/1:20,0:14:5.62:38,6,0	1/1:13,2:12:7.05:57,7,0	0/1:30,0:17:22.01:36,0,22	1/1:6,11:15:3.22:13,3,0	0/1:24,0:17:11.06:99,0,11	1/1:13,0:5:5.14:23,5,0	0/1:10,0:6:15.58:16,0,29
chr10	55038275	.	GA	G	307.04	PASS	AB=0.753;AC=3;AF=0.056;AN=54;BaseQRankSum=6.410;DP=521;FS=1.146;HRun=2;HaplotypeScore=91.8559;InbreedingCoeff=-0.0596;MQ=43.68;MQ0=70;MQRankSum=-6.018;QD=6.82;ReadPosRankSum=-0.550;VQSLOD=0.5267;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:25:64.15:0,64,888	0/0:6,0:3:9.02:0,9,117	0/0:22,1:2:4.19:0,4,21	./.	0/0:12,0:8:21.54:0,22,314	0/0:18,0:15:30.86:0,31,470	0/0:24,0:16:36.12:0,36,528	0/0:24,0:15:45.12:0,45,613	0/0:23,0:16:33.58:0,34,493	0/0:13,0:10:30.10:0,30,449	0/0:9,0:7:21.07:0,21,310	0/0:16,0:15:36.11:0,36,499	0/0:16,0:14:32.85:0,33,459	0/0:18,0:10:21.06:0,21,293	0/0:20,0:12:33.11:0,33,490	0/0:22,0:20:24.08:0,24,358	0/0:25,0:20:51.17:0,51,762	0/0:25,0:21:57.19:0,57,837	0/1:18,1:8:3.11:3,0,166	0/1:10,7:17:99:187,0,188	0/0:27,0:21:30.64:0,31,227	0/0:24,0:20:51.16:0,51,730	0/0:11,0:10:27.09:0,27,404	0/0:27,0:23:52.73:0,53,765	0/0:17,0:17:9.53:0,10,360	0/0:23,0:19:57.18:0,57,805	0/1:3,6:8:65.59:208,0,66	0/0:9,0:8:21.07:0,21,315
chr10	55038300	.	G	GGAT	1513.96	PASS	AB=0.894;AC=9;AF=0.161;AN=56;BaseQRankSum=-1.621;DP=518;FS=6.709;HRun=0;HaplotypeScore=117.3178;InbreedingCoeff=0.3208;MQ=56.05;MQ0=16;MQRankSum=-4.955;QD=11.21;ReadPosRankSum=-0.751;VQSLOD=2.7864;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:33:95.99:0,96,1349	1/1:1,4:6:12.04:273,12,0	0/0:35,0:7:3.65:0,4,51	0/1:31,0:6:7.97:8,0,13	0/0:10,0:9:27.02:0,27,427	0/0:15,0:14:42.04:0,42,615	0/0:19,0:17:41.58:0,42,648	0/0:25,0:23:67.39:0,67,970	0/0:19,0:15:27.69:0,28,544	0/0:12,0:12:36.12:0,36,589	0/0:8,0:8:21.06:0,21,325	0/0:12,0:12:36.02:0,36,543	0/0:14,0:14:39.06:0,39,547	0/0:13,0:11:27.08:0,27,434	0/0:12,0:11:33.11:0,33,518	1/1:2,18:20:26.99:603,27,0	0/0:26,0:25:63.92:0,64,934	0/0:26,0:25:69.08:0,69,1011	0/1:11,3:11:69.58:250,0,70	0/1:20,6:26:99:388,0,192	0/1:22,0:21:43.10:43,0,68	0/0:21,0:20:54.16:0,54,845	0/0:8,0:8:24.08:0,24,409	0/0:31,0:28:57.70:0,58,934	0/0:16,0:16:42.06:0,42,544	0/0:16,0:15:45.13:0,45,692	0/1:12,3:14:97.22:97,0,275	0/0:11,0:11:30.05:0,30,415
chr10	55040225	.	AACACACACACACACACACACACAC	A	9338.31	PASS	AB=0.917;AC=38;AF=0.704;AN=54;BaseQRankSum=7.080;DP=599;FS=4.930;HRun=0;HaplotypeScore=327.2194;InbreedingCoeff=0.4569;MQ=65.74;MQ0=9;MQRankSum=-4.226;QD=20.00;ReadPosRankSum=-0.630;VQSLOD=2.7231;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:17,10:26:12.93:281,13,0	0/0:14,0:14:15.05:0,15,309	0/0:21,0:16:2.94:0,3,33	0/0:29,0:24:5.99:0,6,68	1/1:10,12:23:11.79:120,12,0	1/1:8,5:13:7.58:151,8,0	1/1:29,0:28:2.95:74,3,0	1/1:21,0:21:2.37:8,2,0	1/1:4,11:14:19.62:757,20,0	1/1:18,12:30:34.64:1257,35,0	1/1:10,8:18:14.89:358,15,0	1/1:15,15:29:22.63:632,23,0	1/1:13,9:22:9.03:319,9,0	1/1:5,7:12:6.02:260,6,0	1/1:10,5:14:4.57:77,5,0	0/1:26,0:26:99:115,0,130	0/1:23,0:24:6.91:535,0,7	0/1:9,9:18:34.27:363,0,34	0/0:14,0:13:17.27:0,17,320	0/0:18,0:18:21.05:0,21,464	0/0:31,0:29:26.87:0,27,819	1/1:18,12:30:25.64:681,26,0	1/1:7,1:15:6:106,6,0	1/1:20,13:31:6.02:257,6,0	1/1:7,9:16:16.87:564,17,0	1/1:12,16:29:55.60:2299,56,0	0/1:19,0:17:99:125,0,381	./.
chr10	55040251	.	C	CAGAGAGAG	10349.71	PASS	AB=0.977;AC=29;AF=0.518;AN=56;BaseQRankSum=5.824;DP=648;FS=0.000;HRun=0;HaplotypeScore=271.8696;InbreedingCoeff=0.0837;MQ=41.49;MQ0=28;MQRankSum=-5.756;QD=21.70;ReadPosRankSum=6.554;VQSLOD=3.0519;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:23:72.71:524,0,73	0/0:12,0:12:18.04:0,18,368	0/1:17,0:4:1.83:2,0,105	0/0:23,0:8:11.22:0,11,331	0/1:30,0:29:36.89:233,0,37	0/1:18,0:16:2.34:252,0,2	0/1:15,7:27:72.18:250,0,72	0/1:13,0:10:85.71:383,0,86	1/1:23,0:22:14.33:561,14,0	1/1:28,0:28:19.83:1110,20,0	0/1:18,0:16:43.91:316,0,44	1/1:27,0:26:6.29:709,6,0	1/1:22,0:21:12.20:420,12,0	0/1:22,0:22:21.97:336,0,22	1/1:18,0:17:2.28:299,2,0	0/0:30,0:30:15.05:0,15,382	0/1:23,0:21:81.64:717,0,82	0/1:22,0:22:99:479,0,138	0/0:14,0:13:26.36:0,26,494	0/0:22,0:22:53.82:0,54,1214	0/0:48,0:45:33.70:0,34,852	1/1:26,0:26:41.14:689,41,0	0/1:19,0:19:40.74:212,0,41	0/1:40,0:38:6.29:456,0,6	1/1:18,0:17:15.20:565,15,0	1/1:32,0:32:47.80:1769,48,0	0/0:22,0:20:30.08:0,30,670	0/1:5,0:5:14.97:70,0,15
chr10	55040263	.	CACACACACACACACACAGAG	C	4560.15	PASS	AB=0.995;AC=21;AF=0.375;AN=56;BaseQRankSum=3.494;DP=710;FS=1.614;HRun=0;HaplotypeScore=354.4027;InbreedingCoeff=-0.1351;MQ=46.67;MQ0=30;MQRankSum=-5.269;QD=9.27;ReadPosRankSum=5.126;VQSLOD=2.4989;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:25:17.78:0,18,291	1/1:2,13:15:11.71:126,12,0	0/0:33,0:12:36.06:0,36,564	0/0:35,0:14:23.17:0,23,515	0/0:31,0:29:38.76:0,39,504	0/0:17,0:15:16.55:0,17,251	0/0:18,0:17:18.97:0,19,375	0/0:14,0:11:33.11:0,33,591	0/1:29,0:28:99:242,0,529	0/1:29,0:29:99:409,0,780	0/1:21,0:19:83.51:84,0,247	0/1:28,0:27:77.92:78,0,314	0/1:26,0:25:62.06:62,0,526	0/1:21,0:21:75.26:75,0,375	0/0:17,0:16:29.41:0,29,426	1/1:1,29:30:8.70:353,9,0	0/1:23,0:21:99:128,0,326	0/1:24,0:24:99:286,0,478	1/1:17,0:16:40.69:529,41,0	0/1:23,2:25:0.99:527,0,1	0/1:56,0:53:17.68:18,0,211	0/1:27,0:27:78.91:79,0,338	0/0:21,0:20:30.93:0,31,438	0/1:47,0:45:63.57:64,0,581	0/1:19,0:18:99:210,0,175	0/1:34,0:34:99:915,0,691	0/1:21,0:19:14.50:376,0,15	0/0:3,0:3:3.01:0,3,48
chr10	55040265	.	CACACACACACACACAGAG	C	4263.25	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=4.046;DP=724;FS=2.914;HRun=0;HaplotypeScore=347.5469;InbreedingCoeff=-0.0341;MQ=47.87;MQ0=30;MQRankSum=-3.952;QD=8.54;ReadPosRankSum=5.012;VQSLOD=2.7862;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:25:18.41:0,18,287	1/1:15,0:15:6.41:20,6,0	0/0:35,0:14:42.08:0,42,669	0/0:36,0:16:19.56:0,20,551	0/0:32,0:30:41.87:0,42,552	0/0:18,0:16:19.61:0,20,302	0/0:18,0:17:18.58:0,19,378	0/0:15,0:12:36.12:0,36,629	0/1:30,0:29:99:197,0,577	0/1:29,0:29:99:338,0,793	0/1:21,0:19:69.15:69,0,247	0/1:30,0:29:54.39:54,0,457	0/1:26,0:25:47.66:48,0,533	0/1:22,0:22:58.22:58,0,423	0/0:17,0:16:29.97:0,30,427	1/1:30,0:30:4.07:273,4,0	0/1:24,0:22:99:112,0,380	0/1:24,0:24:99:245,0,478	1/1:4,14:17:43.93:624,44,0	1/1:24,1:25:20.88:604,21,0	0/1:56,0:53:55.47:55,0,123	0/1:28,0:28:61.07:61,0,386	0/0:22,0:21:34.33:0,34,487	0/1:48,0:46:48.70:49,0,618	0/1:19,0:18:99:182,0,175	0/1:34,0:34:99:774,0,705	1/1:6,14:19:8.88:500,9,0	0/0:3,0:3:3.01:0,3,48
chr10	55040279	.	CAG	C	535.55	PASS	AB=0.549;AC=9;AF=0.167;AN=54;BaseQRankSum=2.658;DP=804;FS=2.080;HRun=0;HaplotypeScore=256.1474;InbreedingCoeff=0.8082;MQ=51.26;MQ0=20;MQRankSum=0.174;QD=3.97;ReadPosRankSum=0.955;VQSLOD=2.4973;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:33:38.39:0,38,294	./.	0/0:43,0:22:65.64:0,66,565	0/0:43,0:22:41.81:0,42,450	0/0:36,0:34:53.30:0,53,381	0/0:25,0:23:41.78:0,42,327	0/0:21,0:21:35.91:0,36,295	0/0:28,0:25:74.99:0,75,676	0/0:32,0:32:53.79:0,54,398	0/0:33,0:33:73.06:0,73,559	0/0:25,0:23:33.34:0,33,233	0/0:35,0:34:49.16:0,49,372	0/0:29,0:29:47.76:0,48,366	0/0:25,0:25:42.85:0,43,308	0/0:17,0:17:32.56:0,33,238	1/1:29,0:29:5.75:30,6,0	0/0:24,0:23:26.23:0,26,275	0/0:26,0:26:28.64:0,29,314	1/1:17,0:16:32.85:252,33,0	1/1:22,0:23:44.71:345,45,0	0/1:9,41:49:9.05:9,0,31	0/0:31,0:31:39.86:0,40,290	0/0:27,0:26:48.93:0,49,369	0/0:54,0:52:57.75:0,58,458	0/0:21,0:20:16.03:0,16,141	0/0:43,0:43:97.53:0,98,680	1/1:15,0:15:10.27:52,10,0	0/0:4,0:4:5.99:0,6,49
chr10	55040719	.	G	GACAGACAC	5580.41	PASS	AB=0.997;AC=20;AF=0.357;AN=56;BaseQRankSum=-10.311;DP=967;FS=2.151;HRun=0;HaplotypeScore=295.7618;InbreedingCoeff=0.2104;MQ=63.06;MQ0=0;MQRankSum=-6.286;QD=11.46;ReadPosRankSum=-6.849;VQSLOD=2.0300;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:44.81:0,45,1926	0/1:12,0:12:9.90:10,0,442	0/0:31,0:25:38.50:0,39,847	0/0:46,0:38:69.80:0,70,1296	0/1:26,0:26:40.37:40,0,843	0/0:29,0:29:0.22:0,0,1098	0/1:40,0:40:27.07:27,0,1347	0/1:43,0:43:14.83:15,0,1162	0/0:39,0:39:49.28:0,49,1601	0/1:53,0:53:62.95:63,0,1758	0/0:22,0:22:25.64:0,26,888	1/1:9,20:33:27.09:1006,27,0	1/1:11,20:33:36.10:1352,36,0	0/1:28,1:29:84.06:84,0,1076	0/0:42,0:41:11.34:0,11,1654	0/1:33,0:33:35.25:35,0,1244	0/0:37,0:37:49.33:0,49,1435	0/1:30,0:30:8.15:8,0,926	0/1:24,0:23:6.28:6,0,565	0/0:22,0:22:12.20:0,12,960	0/0:74,0:74:19.56:0,20,3010	1/1:6,21:29:30.10:1184,30,0	1/1:4,18:25:30.10:1118,30,0	1/1:21,20:42:20.89:545,21,0	0/0:35,0:35:39.75:0,40,1372	0/1:35,0:35:86.47:86,0,1203	0/0:30,0:30:59.70:0,60,1449	0/0:22,0:22:59.41:0,59,1017
chr10	55040845	.	T	TGA	30256.78	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-7.107;DP=767;FS=1.219;HRun=0;HaplotypeScore=104.4534;InbreedingCoeff=0.9994;MQ=82.49;MQ0=3;MQRankSum=-11.064;QD=42.20;ReadPosRankSum=6.574;VQSLOD=6.5328;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,45:51:99:2076,117,0	1/1:2,16:18:45.15:798,45,0	0/0:23,0:23:60.18:0,60,797	0/0:27,0:27:72.07:0,72,916	1/1:2,16:18:48.16:835,48,0	1/1:2,26:28:69.24:1224,69,0	1/1:0,25:25:66.23:1171,66,0	1/1:3,31:34:93.30:1609,93,0	1/1:0,24:23:63.22:1118,63,0	1/1:3,24:29:75.25:1287,75,0	1/1:3,11:14:33.11:580,33,0	1/1:3,32:35:87.30:1543,87,0	1/1:3,24:28:65.91:1166,66,0	1/1:1,41:41:99:1757,99,0	1/1:3,35:38:90.31:1597,90,0	1/1:2,29:31:78.27:1383,78,0	1/1:5,13:20:33.11:586,33,0	1/1:1,23:24:63.22:1118,63,0	1/1:10,12:21:42.13:669,42,0	1/1:3,21:25:57.15:969,57,0	1/1:6,40:48:90.24:1598,90,0	1/1:0,21:22:51.17:905,51,0	1/1:2,11:13:29.98:532,30,0	1/1:2,30:32:75.23:1330,75,0	1/1:3,14:17:39.13:692,39,0	1/1:2,28:32:90.27:1532,90,0	1/1:2,27:29:78.09:1382,78,0	1/1:1,16:16:45.15:798,45,0
chr10	55041596	.	GGAA	G	21260.47	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-2.033;DP=765;FS=2.618;HRun=0;HaplotypeScore=136.2337;InbreedingCoeff=0.9983;MQ=83.46;MQ0=0;MQRankSum=-7.348;QD=39.30;ReadPosRankSum=6.010;VQSLOD=5.9192;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,50:52:99:2217,138,0	0/0:10,0:10:27.09:0,27,596	0/0:22,0:21:54.18:0,54,1104	0/0:30,0:30:72.99:0,73,1397	1/1:2,22:24:54.18:867,54,0	1/1:1,19:20:54.18:868,54,0	1/1:2,20:22:54.18:867,54,0	1/1:4,32:36:93.29:1441,93,0	1/1:1,19:20:45.15:712,45,0	1/1:4,26:30:78.27:1250,78,0	1/1:2,19:21:51.13:791,51,0	1/1:4,36:40:96.33:1528,96,0	1/1:1,24:25:72.25:1157,72,0	1/1:3,31:34:90.31:1435,90,0	1/1:2,34:36:93.32:1494,93,0	0/0:28,0:28:75.26:0,75,1652	1/1:1,37:38:84.29:1349,84,0	1/1:1,8:9:18.06:279,18,0	0/0:25,0:25:69.23:0,69,1442	0/0:38,0:38:99:0,102,2246	0/0:44,0:44:99:0,111,2429	1/1:2,23:25:60.20:963,60,0	1/1:2,23:25:50.88:817,51,0	1/1:0,26:26:56.37:914,56,0	1/1:2,24:26:66.23:1060,66,0	1/1:3,17:20:51.17:819,51,0	0/0:27,0:27:75.26:0,75,1655	1/1:0,12:12:27.09:433,27,0
chr10	55041633	.	C	CCA	7914.56	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-15.952;DP=747;FS=5.390;HRun=0;HaplotypeScore=145.8398;InbreedingCoeff=0.9992;MQ=85.61;MQ0=0;MQRankSum=0.227;QD=51.39;ReadPosRankSum=2.773;VQSLOD=5.0696;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,138,2181	1/1:0,8:9:21.07:426,21,0	0/0:26,0:26:72:0,72,1073	0/0:23,0:23:54.88:0,55,813	0/0:19,0:19:57.14:0,57,872	0/0:20,0:20:60.19:0,60,951	0/0:23,0:23:66.23:0,66,1072	0/0:24,0:24:68.71:0,69,832	0/0:25,0:25:66.14:0,66,1006	0/0:40,0:40:99:0,120,1900	0/0:22,0:22:66.17:0,66,1018	0/0:28,0:28:78.27:0,78,1260	0/0:28,0:28:84.24:0,84,1336	0/0:37,0:37:99:0,105,1680	0/0:36,0:36:96.26:0,96,1505	1/1:0,30:31:78.27:1583,78,0	0/0:34,0:34:90.21:0,90,1381	0/0:15,0:15:42.09:0,42,630	1/1:1,24:26:75.21:1382,75,0	1/1:0,31:31:84.25:1663,84,0	1/1:1,31:32:72.25:1461,72,0	0/0:29,0:29:81.21:0,81,1259	0/0:20,0:20:51.17:0,51,823	0/0:23,0:23:59.96:0,60,975	0/0:29,0:29:87.23:0,87,1335	0/0:24,0:24:69.18:0,69,1063	1/1:1,24:24:69.24:1400,69,0	0/0:17,0:17:45.11:0,45,702
chr10	55042268	.	GCAGGGT	G	10117.70	PASS	AB=0.994;AC=34;AF=0.607;AN=56;BaseQRankSum=12.074;DP=625;FS=2.504;HRun=0;HaplotypeScore=201.6572;InbreedingCoeff=-0.6472;MQ=74.81;MQ0=0;MQRankSum=-11.646;QD=16.19;ReadPosRankSum=13.985;VQSLOD=1.8534;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:38,2:40:99:449,0,153	0/1:16,0:16:25.81:275,0,26	0/1:24,0:24:99:151,0,257	0/1:23,0:23:99:150,0,338	0/1:22,0:22:99:329,0,117	0/1:20,1:21:15.06:401,0,15	0/1:23,1:24:99:234,0,141	0/1:23,0:23:99:353,0,112	1/1:27,0:27:27.65:677,28,0	0/1:27,0:27:96.68:534,0,97	1/1:12,0:12:16.20:232,16,0	0/1:33,0:33:27.17:676,0,27	1/1:27,0:27:69.20:785,69,0	1/1:32,0:32:3.77:759,4,0	1/1:24,0:24:44.59:509,45,0	0/1:16,0:16:11.94:229,0,12	0/1:26,0:26:65.63:428,0,66	0/1:12,0:12:57.59:116,0,58	0/1:16,0:16:75.09:236,0,75	0/1:23,0:23:99:297,0,131	0/1:43,0:43:38.58:344,0,39	1/1:15,0:15:18.05:205,18,0	0/1:17,0:17:5.84:310,0,6	0/1:21,0:21:36.71:212,0,37	0/1:15,0:15:22.21:368,0,22	0/1:20,0:20:20.25:377,0,20	0/1:17,0:17:99:300,0,114	0/1:9,0:9:17.89:183,0,18
chr10	55044198	.	GCACACACACACACA	G	11993.49	PASS	AB=0.919;AC=43;AF=0.796;AN=54;BaseQRankSum=1.709;DP=592;FS=1.837;HRun=0;HaplotypeScore=239.1248;InbreedingCoeff=0.4471;MQ=50.92;MQ0=12;MQRankSum=-4.884;QD=22.89;ReadPosRankSum=-0.759;VQSLOD=3.5621;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:30,17:48:15.09:457,15,0	0/0:7,0:7:6.02:0,6,290	./.	0/0:15,0:4:0.89:0,1,2	1/1:7,9:17:15.05:550,15,0	1/1:12,13:26:18.37:590,18,0	1/1:19,9:29:5.82:221,6,0	1/1:21,4:24:12.04:213,12,0	1/1:14,11:27:41.79:1457,42,0	1/1:15,11:28:18.03:1141,18,0	1/1:13,4:17:8.86:233,9,0	1/1:10,2:12:6.94:143,7,0	1/1:9,14:23:9.10:922,9,0	1/1:13,10:23:30.01:1034,30,0	1/1:11,20:31:39.13:1528,39,0	0/0:17,0:18:30.08:0,30,1417	1/1:11,9:20:6.02:235,6,0	1/1:4,3:8:6.02:175,6,0	0/0:16,0:16:2.50:0,2,9	0/1:17,0:20:99:102,0,125	0/1:35,0:34:0:0,0,0	1/1:14,11:26:30.06:1021,30,0	1/1:13,10:23:10.86:344,11,0	1/1:24,12:36:3.48:119,3,0	1/1:12,8:20:12.04:458,12,0	1/1:7,3:11:15.05:548,15,0	0/1:7,0:8:30.55:31,0,67	1/1:2,5:7:12.04:470,12,0
chr10	55044199	.	C	CGCGC	1272.03	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=-2.616;DP=581;FS=11.223;HRun=0;HaplotypeScore=200.5493;InbreedingCoeff=0.8014;MQ=48.78;MQ0=12;MQRankSum=3.674;QD=19.57;ReadPosRankSum=1.421;VQSLOD=2.3858;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:59.71:0,60,853	0/1:7,0:7:3.40:131,0,3	0/0:11,0:2:6.02:0,6,93	0/0:14,0:3:3.48:0,3,39	0/0:17,0:17:21.54:0,22,284	0/0:26,0:26:44.87:0,45,648	0/0:29,0:29:45.15:0,45,669	0/0:24,0:23:53.18:0,53,798	0/0:27,0:27:77.63:0,78,1052	0/0:28,0:28:75.22:0,75,1043	0/0:17,0:17:41.96:0,42,592	0/0:12,0:12:24.07:0,24,342	0/0:23,0:23:51.15:0,51,672	0/0:23,0:23:60.15:0,60,775	0/0:31,0:31:69.21:0,69,935	1/1:17,0:17:10.39:333,10,0	0/0:20,0:20:27.07:0,27,383	0/0:7,0:7:15.04:0,15,196	1/1:14,0:14:18:205,18,0	1/1:19,0:19:39.55:502,40,0	0/0:6,24:33:0.85:0,1,2	0/0:26,0:25:51.15:0,51,680	0/0:23,0:23:27.09:0,27,389	0/0:37,0:36:34.05:0,34,510	0/0:19,0:19:33.11:0,33,482	0/0:12,0:11:33.11:0,33,484	1/1:8,0:8:20.72:259,21,0	0/0:7,0:7:14.64:0,15,177
chr10	55044863	.	TTA	T	21730.06	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-2.929;DP=613;FS=3.374;HRun=0;HaplotypeScore=92.8946;InbreedingCoeff=0.9861;MQ=80.36;MQ0=0;MQRankSum=-9.227;QD=37.86;ReadPosRankSum=5.469;VQSLOD=6.9194;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,31:32:81.15:1158,81,0	1/1:0,12:12:30.09:448,30,0	0/0:25,0:24:46.74:0,47,958	0/0:14,0:14:13.72:0,14,469	1/1:0,32:32:95.95:1277,96,0	1/1:0,16:16:36.12:538,36,0	1/1:0,22:22:45.15:673,45,0	1/1:0,31:31:93.28:1323,93,0	1/1:0,18:18:42.10:603,42,0	1/1:0,29:29:87.24:1235,87,0	1/1:0,24:24:68.93:900,69,0	1/1:0,34:34:87.29:1301,87,0	1/1:0,23:23:51.17:762,51,0	1/1:0,16:16:38.96:583,39,0	1/1:0,33:33:84.28:1256,84,0	1/1:0,18:18:45.15:673,45,0	1/1:0,25:25:63.21:942,63,0	1/1:0,16:16:36.12:535,36,0	1/1:0,26:26:78.19:1049,78,0	1/1:0,27:27:75.14:1048,75,0	1/1:0,17:17:45.15:673,45,0	1/1:0,17:17:50.99:684,51,0	1/1:0,14:14:29.65:448,30,0	1/1:0,22:22:57.19:852,57,0	1/1:0,17:17:42.14:628,42,0	1/1:0,24:24:72.21:1018,72,0	1/1:0,21:21:54.18:807,54,0	1/1:0,8:8:21.07:314,21,0
chr10	55048317	.	T	TGC	124.71	PASS	AB=0.825;AC=2;AF=0.036;AN=56;BaseQRankSum=4.689;DP=530;FS=37.060;HRun=0;HaplotypeScore=210.4254;InbreedingCoeff=-0.0425;MQ=53.78;MQ0=12;MQRankSum=-3.022;QD=3.90;ReadPosRankSum=0.248;VQSLOD=1.4150;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:48.63:0,49,760	0/0:6,0:6:15.05:0,15,231	0/0:35,0:10:15.05:0,15,227	0/0:37,0:16:19.06:0,19,330	0/0:12,0:12:30.10:0,30,489	0/0:15,0:15:39.13:0,39,635	0/0:22,0:22:60.20:0,60,977	0/0:18,0:17:42.12:0,42,657	0/0:19,0:19:53.96:0,54,879	0/0:18,0:18:51.16:0,51,809	0/0:12,0:12:25.32:0,25,339	0/0:17,0:17:51.12:0,51,777	0/0:26,0:26:66.22:0,66,1052	0/0:12,0:12:33.11:0,33,538	0/0:25,0:25:57.18:0,57,903	0/0:23,0:23:66.21:0,66,1042	0/0:17,0:17:39.12:0,39,605	0/1:5,3:8:99:161,0,166	0/0:17,0:15:42.14:0,42,683	0/0:8,0:8:24.08:0,24,378	0/0:41,0:39:74.06:0,74,1427	0/0:20,0:20:54.18:0,54,867	0/0:12,0:12:36.11:0,36,550	0/1:22,2:22:52.62:53,0,475	0/0:21,0:21:57.19:0,57,917	0/0:25,0:25:66.22:0,66,1057	0/0:16,0:16:48.16:0,48,782	0/0:2,0:2:5.98:0,6,68
chr10	55048329	.	TCC	T	13444.57	PASS	AB=0.676;AC=50;AF=0.893;AN=56;BaseQRankSum=-0.199;DP=492;FS=42.226;HRun=5;HaplotypeScore=158.8926;InbreedingCoeff=0.5906;MQ=51.86;MQ0=6;MQRankSum=-0.181;QD=31.27;ReadPosRankSum=5.269;VQSLOD=1.8174;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,16:17:45.15:617,45,0	1/1:1,8:9:15.05:208,15,0	0/0:31,0:13:34.64:0,35,476	0/0:30,0:15:23.04:0,23,309	1/1:2,9:11:27.09:376,27,0	1/1:2,12:14:33.10:441,33,0	1/1:2,19:21:48.16:676,48,0	1/1:7,14:19:18.15:447,18,0	1/1:5,13:18:39.13:542,39,0	1/1:1,16:17:42.14:586,42,0	1/1:4,9:13:21.07:291,21,0	1/1:0,16:16:48.16:669,48,0	1/1:3,20:23:60.20:836,60,0	1/1:0,11:11:30.10:417,30,0	1/1:2,17:19:54.18:745,54,0	1/1:3,15:18:42.14:583,42,0	1/1:3,12:15:24.08:335,24,0	0/1:1,4:8:23.56:181,0,24	1/1:3,9:11:26.94:356,27,0	1/1:0,10:10:27.09:376,27,0	1/1:13,26:39:19.25:1201,19,0	1/1:4,18:22:48.15:656,48,0	1/1:0,10:10:27.09:377,27,0	0/1:11,9:22:43.78:317,0,44	1/1:3,15:18:48.16:667,48,0	1/1:3,20:24:63.21:876,63,0	1/1:2,14:16:42.14:587,42,0	1/1:0,2:2:6.02:82,6,0
chr10	55048331	.	C	CT	1481.25	PASS	AB=0.991;AC=27;AF=0.482;AN=56;BaseQRankSum=3.006;DP=504;FS=13.279;HRun=0;HaplotypeScore=209.1638;InbreedingCoeff=-0.3214;MQ=49.87;MQ0=3;MQRankSum=-3.726;QD=3.66;ReadPosRankSum=-9.844;VQSLOD=0.0946;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:17,0:17:9.68:51,0,10	1/1:10,0:10:0.80:43,1,0	0/0:28,0:13:35.71:0,36,415	0/0:27,0:15:26.49:0,26,286	0/1:14,0:14:26.12:26,0,30	0/1:15,0:15:37.82:93,0,38	0/1:21,0:21:27.67:140,0,28	0/1:20,1:19:87.89:94,0,88	0/1:18,0:18:14.43:14,0,75	0/1:18,0:18:6.50:64,0,6	1/1:16,0:16:7.29:116,7,0	0/1:16,0:16:5.98:59,0,6	0/1:26,0:26:21.35:120,0,21	0/1:12,0:12:9.13:58,0,9	0/1:19,0:19:6.32:154,0,6	0/0:17,0:17:21.02:0,21,64	0/1:14,0:14:8.34:8,0,10	1/1:8,0:8:10.44:123,10,0	0/1:12,0:11:7.07:42,0,7	0/1:12,0:12:4.55:42,0,5	0/1:36,4:38:99:119,0,120	0/1:23,0:24:20.68:21,0,29	0/0:11,0:11:7.56:0,8,18	0/1:24,0:22:15.38:15,0,102	0/1:18,0:18:19.06:19,0,23	0/1:27,0:27:3.59:181,0,4	0/0:15,0:15:15.01:0,15,56	1/1:3,0:2:1.43:37,1,0
chr10	55048333	.	CCA	C	6905.53	PASS	AB=0.966;AC=45;AF=0.804;AN=56;BaseQRankSum=1.186;DP=481;FS=18.215;HRun=0;HaplotypeScore=182.2726;InbreedingCoeff=0.1901;MQ=50.10;MQ0=3;MQRankSum=0.488;QD=16.17;ReadPosRankSum=9.373;VQSLOD=3.0436;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:17:29.33:290,29,0	0/1:9,0:9:1.21:86,0,1	0/0:27,0:12:36.06:0,36,579	0/0:24,0:15:9.33:0,9,373	1/1:13,0:13:26.78:201,27,0	0/1:15,0:15:1.06:202,0,1	1/1:21,0:21:32.55:337,33,0	1/1:19,0:17:30.02:180,30,0	1/1:13,0:13:38.79:305,39,0	0/1:20,0:20:49.49:254,0,49	0/1:12,0:12:9.11:128,0,9	1/1:16,0:16:47.80:378,48,0	1/1:23,0:23:46.82:438,47,0	1/1:12,0:12:6.18:237,6,0	1/1:18,1:19:53.88:451,54,0	1/1:15,1:16:41.66:333,42,0	1/1:13,0:13:9.02:176,9,0	0/1:7,1:8:15.10:99,0,15	1/1:13,0:11:2.41:129,2,0	1/1:12,0:12:11.56:165,12,0	0/1:36,2:37:25.73:588,0,26	1/1:21,1:22:32.55:355,33,0	1/1:12,0:12:26.62:185,27,0	0/1:20,2:21:53.84:230,0,54	1/1:16,2:18:47.79:405,48,0	1/1:24,1:25:11.16:396,11,0	1/1:14,0:14:41.62:313,42,0	1/1:3,0:2:5.96:44,6,0
chr10	55048352	.	TTCC	T	1126.52	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=8.947;DP=498;FS=11.045;HRun=0;HaplotypeScore=211.3757;InbreedingCoeff=-0.1969;MQ=46.73;MQ0=10;MQRankSum=-7.621;QD=3.43;ReadPosRankSum=5.964;VQSLOD=1.2521;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:20,0:20:99:100,0,121	0/0:10,0:10:23.95:0,24,422	0/0:25,0:8:23.65:0,24,292	0/1:17,0:9:3.89:4,0,197	0/1:13,0:13:11.39:11,0,160	0/1:17,0:16:57.60:58,0,63	0/1:24,0:23:99:103,0,169	0/0:18,0:13:23.75:0,24,240	0/1:16,0:15:48.22:48,0,97	0/1:24,0:24:74.91:99,0,75	1/1:11,0:11:0.11:53,0,0	0/1:19,0:19:89.84:90,0,121	0/1:18,0:18:70.41:70,0,208	0/1:11,0:11:23.88:24,0,79	1/1:20,0:19:3.42:135,3,0	0/0:13,0:13:27.03:0,27,444	0/1:11,0:11:16.24:16,0,66	0/1:6,0:6:21.36:21,0,75	0/0:15,0:13:36.07:0,36,571	0/0:13,0:13:33.11:0,33,651	0/0:45,2:47:73.62:0,74,2245	0/1:26,0:25:30.56:31,0,193	0/0:12,0:12:18.02:0,18,163	1/1:17,6:22:12.47:156,12,0	0/1:18,0:18:45.31:45,0,183	0/1:31,0:30:99:211,0,152	0/0:17,0:17:45.08:0,45,855	1/1:3,0:2:2.92:17,3,0
chr10	55048355	.	CTCT	C	3630.60	PASS	AB=0.764;AC=24;AF=0.429;AN=56;BaseQRankSum=5.063;DP=493;FS=4.683;HRun=0;HaplotypeScore=199.8215;InbreedingCoeff=-0.3096;MQ=47.16;MQ0=11;MQRankSum=-9.587;QD=10.20;ReadPosRankSum=4.596;VQSLOD=2.6288;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:12,8:20:26.78:266,0,27	0/0:10,0:10:20.15:0,20,244	0/0:22,0:6:14.71:0,15,214	0/0:15,0:7:9.57:0,10,213	0/1:6,7:14:43.03:43,0,128	1/1:7,9:15:3.44:162,3,0	0/1:18,6:23:33.53:257,0,34	0/1:18,0:12:43.71:44,0,83	0/1:13,4:16:34.83:142,0,35	0/1:17,8:25:28.30:395,0,28	1/1:4,7:11:21.98:167,22,0	0/1:10,8:18:8.30:250,0,8	0/1:9,9:18:67.42:191,0,67	0/1:9,3:12:18.28:127,0,18	1/1:7,13:19:29.48:353,29,0	0/1:13,0:13:30.04:30,0,199	0/1:7,3:10:30.25:76,0,30	0/1:4,2:6:19.86:87,0,20	0/0:15,0:13:16.45:0,16,298	0/0:14,0:14:11.04:0,11,371	0/0:45,0:45:63.10:0,63,1284	0/1:16,9:24:74.76:166,0,75	0/1:4,7:11:21.37:21,0,26	0/1:18,6:23:5.05:186,0,5	0/1:12,6:18:67:140,0,67	0/1:16,16:31:34.57:502,0,35	0/0:16,0:16:39.09:0,39,524	0/1:3,1:3:9.04:26,0,9
chr10	55048364	.	CTCT	C	3573.39	PASS	AB=0.749;AC=23;AF=0.411;AN=56;BaseQRankSum=4.002;DP=484;FS=4.516;HRun=0;HaplotypeScore=187.7745;InbreedingCoeff=-0.2572;MQ=47.46;MQ0=11;MQRankSum=-9.883;QD=10.39;ReadPosRankSum=7.112;VQSLOD=2.6612;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:14,8:22:59.36:285,0,59	0/0:10,0:10:23.18:0,23,417	0/0:14,0:4:12.03:0,12,209	0/0:13,0:6:14.30:0,14,220	0/1:6,8:14:43.90:44,0,145	1/1:7,9:15:6.15:187,6,0	0/1:19,6:24:27.52:302,0,28	0/1:18,0:10:15.37:15,0,97	0/1:12,4:15:35.34:149,0,35	0/1:13,8:21:62.91:280,0,63	1/1:4,7:11:23.89:180,24,0	0/1:10,8:18:23.34:233,0,23	0/1:8,9:17:72.99:193,0,73	0/1:8,3:11:33.26:118,0,33	1/1:10,13:22:35.51:406,36,0	0/0:10,0:10:24.06:0,24,476	0/1:9,3:12:41.71:103,0,42	0/1:3,2:5:25.21:72,0,25	0/0:14,0:12:33.02:0,33,557	0/0:16,0:16:45.11:0,45,846	0/0:46,0:46:99:0,135,2543	0/1:12,9:20:97.15:123,0,97	0/1:4,7:11:23.76:24,0,25	0/1:19,6:24:31.13:112,0,31	0/1:14,6:20:64.36:187,0,64	0/1:17,16:32:32.42:518,0,32	0/0:16,0:16:48.14:0,48,963	0/1:4,1:4:6.09:41,0,6
chr10	55048902	.	GA	G	18841.06	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-0.220;DP=761;FS=32.659;HRun=6;HaplotypeScore=84.4749;InbreedingCoeff=0.9982;MQ=86.33;MQ0=0;MQRankSum=-9.628;QD=26.76;ReadPosRankSum=7.230;VQSLOD=2.7265;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,47:49:99:1286,120,0	1/1:0,10:10:27.07:289,27,0	0/0:26,0:26:24.02:0,24,569	0/0:31,0:31:44.95:0,45,853	1/1:1,25:26:72.14:756,72,0	1/1:1,27:28:69.17:740,69,0	1/1:7,39:46:99:1061,99,0	1/1:5,25:30:75.12:772,75,0	1/1:1,24:25:66.17:708,66,0	1/1:2,26:28:75.16:794,75,0	1/1:3,13:16:33.08:354,33,0	1/1:2,25:27:66.16:708,66,0	1/1:1,30:31:78.06:836,78,0	1/1:1,23:24:63.16:676,63,0	1/1:2,22:24:60.15:643,60,0	1/1:1,19:20:51.13:547,51,0	1/1:1,29:30:66.16:705,66,0	1/1:4,16:20:48.11:515,48,0	1/1:3,24:27:72.13:743,72,0	1/1:0,29:29:78.01:795,78,0	1/1:4,40:44:99:1158,108,0	1/1:0,18:18:51.13:547,51,0	1/1:0,21:21:57.14:611,57,0	1/1:2,31:33:87.22:933,87,0	1/1:1,25:26:66.16:702,66,0	1/1:5,29:34:87.22:934,87,0	1/1:1,18:19:45.11:482,45,0	1/1:0,19:19:51.13:547,51,0
chr10	55049702	.	G	GACAC	2916.35	PASS	AB=0.893;AC=44;AF=0.846;AN=52;BaseQRankSum=2.646;DP=730;FS=0.000;HRun=0;HaplotypeScore=159.1214;InbreedingCoeff=0.4207;MQ=58.37;MQ0=23;MQRankSum=-0.083;QD=4.70;ReadPosRankSum=-2.117;VQSLOD=2.1536;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:54,0:54:25.23:675,25,0	0/0:4,0:4:0.47:0,0,1	./.	0/1:52,0:15:0:0,0,0	1/1:17,0:17:3.01:71,3,0	1/1:22,5:28:3.48:71,3,0	1/1:21,0:20:2.69:25,3,0	1/1:35,0:34:9.72:54,10,0	1/1:16,0:16:2.99:24,3,0	1/1:21,0:19:9.90:166,10,0	1/1:17,0:17:8.99:74,9,0	1/1:22,0:22:15.01:179,15,0	1/1:28,0:27:12.33:102,12,0	1/1:22,0:22:10.81:253,11,0	1/1:25,0:27:6.47:66,6,0	1/1:31,0:31:11.32:137,11,0	1/1:16,0:22:9.03:156,9,0	1/1:13,1:21:7.58:127,8,0	./.	0/0:22,0:23:18.53:0,19,283	0/1:40,1:55:98.64:99,0,163	1/1:23,0:23:9.01:137,9,0	1/1:19,0:18:9.02:158,9,0	1/1:36,0:36:8.71:107,9,0	1/1:21,0:21:9.03:146,9,0	1/1:21,0:20:15.67:138,16,0	0/0:21,0:22:33.04:0,33,440	1/1:8,0:8:5.48:81,5,0
chr10	55050287	.	T	TTTTG	14936.36	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-14.750;DP=614;FS=8.707;HRun=0;HaplotypeScore=87.8567;InbreedingCoeff=0.9825;MQ=70.98;MQ0=2;MQRankSum=-0.184;QD=43.04;ReadPosRankSum=1.148;VQSLOD=4.8142;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:11,22:35:54.18:1324,54,0	0/0:17,0:17:45.15:0,45,740	0/0:25,0:20:24.07:0,24,317	0/0:28,0:25:17.47:0,17,337	1/1:6,15:21:45.15:1047,45,0	1/1:1,19:21:45.15:1110,45,0	1/1:11,19:31:47.99:1124,48,0	1/1:13,16:29:48.15:1045,48,0	1/1:3,8:13:18.06:444,18,0	1/1:2,14:16:38.52:779,39,0	1/1:1,12:15:33.11:619,33,0	0/0:25,0:25:63.20:0,63,1024	0/0:16,0:16:39.13:0,39,622	1/1:4,19:23:44.82:1109,45,0	1/1:2,18:21:36.12:887,36,0	0/0:21,0:21:54.17:0,54,865	1/1:8,26:35:44.74:1461,45,0	1/1:8,26:35:63.22:1554,63,0	0/0:25,0:25:36.59:0,37,571	0/0:11,0:11:24.08:0,24,363	0/0:22,0:22:51.17:0,51,831	0/0:15,0:15:45.15:0,45,741	0/0:13,0:13:33.10:0,33,476	0/0:33,0:33:81.23:0,81,1291	1/1:3,13:18:30.10:739,30,0	1/1:4,22:27:69.21:1546,69,0	0/0:14,0:14:39.13:0,39,622	1/1:3,2:5:6.02:148,6,0
chr10	55050883	.	ACCTTTAGTCCCAGCACT	A	20645.73	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=16.647;DP=650;FS=17.081;HRun=0;HaplotypeScore=287.8148;InbreedingCoeff=0.9764;MQ=69.17;MQ0=0;MQRankSum=-15.047;QD=66.17;ReadPosRankSum=2.110;VQSLOD=2.7471;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,33:36:51:2107,51,0	0/0:4,0:4:12.04:0,12,1005	0/0:28,0:26:69.23:0,69,3663	0/0:25,0:21:57.20:0,57,3507	1/1:8,21:29:38.70:1034,39,0	1/1:4,10:14:15.05:744,15,0	1/1:6,30:36:39.13:1833,39,0	1/1:8,17:25:47.98:1351,48,0	1/1:5,10:15:21.07:1041,21,0	1/1:2,18:20:51.15:2283,51,0	1/1:2,5:7:9.03:446,9,0	0/0:26,0:26:75.26:0,75,5671	0/0:20,0:20:57.20:0,57,4325	1/1:6,15:21:30.10:1443,30,0	1/1:2,22:24:42.14:2037,42,0	0/0:26,0:26:78.25:0,78,5845	1/1:6,23:29:24.08:1190,24,0	1/1:6,12:18:23.95:929,24,0	0/0:28,0:26:69.24:0,69,4899	0/0:25,0:25:75.23:0,75,5166	0/0:51,0:51:99:0,154,11726	0/0:23,0:23:69.22:0,69,4941	0/0:19,0:19:51.16:0,51,3715	0/0:40,0:40:99:0,120,8887	1/1:1,16:17:39.07:1804,39,0	1/1:0,14:14:42.12:1957,42,0	0/0:23,0:23:69.24:0,69,5270	1/1:2,5:7:9.03:447,9,0
chr10	55051015	.	CACACACACACAGAGAGAGAG	C	1507.78	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=5.234;DP=593;FS=9.319;HRun=0;HaplotypeScore=276.7459;InbreedingCoeff=0.7735;MQ=50.59;MQ0=17;MQRankSum=-5.923;QD=20.38;ReadPosRankSum=-0.511;VQSLOD=0.8723;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:51.39:0,51,1076	0/0:6,0:6:10.39:0,10,331	0/0:26,0:12:3.54:0,4,958	0/0:22,0:8:21.04:0,21,764	0/0:28,0:27:9.03:0,9,166	0/0:26,0:25:51.65:0,52,1704	0/0:33,0:32:59.56:0,60,1328	0/0:10,0:8:20.99:0,21,428	0/0:22,0:22:48.08:0,48,1240	0/0:22,0:20:57.20:0,57,1820	0/0:15,0:15:2.91:0,3,51	0/0:24,0:24:57.18:0,57,2231	0/0:16,0:16:44.82:0,45,1472	0/0:19,0:18:14.97:0,15,320	0/0:22,0:22:38.26:0,38,1038	0/0:24,0:24:54.21:0,54,2826	0/0:28,0:25:53.98:0,54,1746	0/0:21,0:19:48.16:0,48,1782	1/1:5,8:13:20.88:495,21,0	1/1:4,15:19:2.98:119,3,0	1/1:6,17:22:3.01:44,3,0	0/0:19,0:19:23.27:0,23,965	0/0:12,0:12:17.81:0,18,631	0/0:33,0:32:66.61:0,67,2847	0/0:19,0:18:41.37:0,41,1128	0/0:24,0:24:69.23:0,69,1942	1/1:5,14:19:22.79:990,23,0	0/0:14,0:14:39.13:0,39,1292
chr10	55051021	.	CACACAGAGAGAGAG	C	872.75	PASS	AB=0.945;AC=14;AF=0.250;AN=56;BaseQRankSum=1.655;DP=577;FS=1.609;HRun=0;HaplotypeScore=228.4395;InbreedingCoeff=0.2358;MQ=50.32;MQ0=16;MQRankSum=-1.334;QD=3.56;ReadPosRankSum=0.014;VQSLOD=2.4418;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:30:1.46:1,0,98	0/0:8,0:8:16.41:0,16,274	0/1:20,0:8:8.48:8,0,267	0/0:19,0:6:15.05:0,15,268	0/1:6,23:28:0:0,0,0	0/0:24,0:23:23.66:0,24,458	0/1:35,0:34:25.41:25,0,150	0/0:9,0:7:8.52:0,9,70	0/0:22,0:22:17.27:0,17,187	0/0:22,0:20:31.42:0,31,519	0/1:18,0:18:0:0,0,0	0/0:22,0:22:48.44:0,48,922	0/0:16,0:16:35.02:0,35,560	0/1:18,0:17:8.12:8,0,24	0/0:23,0:23:3.70:0,4,53	0/0:22,0:22:48.75:0,49,1671	0/0:28,0:25:36.39:0,36,900	0/0:20,0:18:25.57:0,26,771	0/1:12,0:12:86.99:255,0,87	1/1:18,0:18:2.98:70,3,0	1/1:22,0:21:2.92:17,3,0	0/0:20,0:20:23.13:0,23,400	0/0:12,0:12:14.89:0,15,241	0/0:31,0:30:35.38:0,35,1318	0/0:19,0:18:2.75:0,3,124	0/1:23,0:23:20.92:21,0,368	1/1:20,0:20:6.06:603,6,0	0/0:15,0:15:20.13:0,20,331
chr10	55051023	.	CACAGAGAG	C	4336.68	PASS	AB=0.993;AC=32;AF=0.571;AN=56;BaseQRankSum=-7.423;DP=575;FS=6.450;HRun=0;HaplotypeScore=176.9407;InbreedingCoeff=0.2255;MQ=50.47;MQ0=16;MQRankSum=2.638;QD=9.49;ReadPosRankSum=0.077;VQSLOD=2.7208;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:30:39.47:431,39,0	0/0:8,0:8:15.38:0,15,112	0/0:17,0:8:5.27:0,5,119	0/0:16,0:5:11.99:0,12,111	0/1:27,0:27:0:0,0,0	0/1:23,0:22:37.67:172,0,38	1/1:36,0:35:24.16:394,24,0	0/1:10,0:8:6.82:38,0,7	1/1:23,0:23:27.25:229,27,0	0/1:22,0:20:4.73:304,0,5	1/1:0,18:18:2.92:17,3,0	0/1:23,0:23:99:123,0,331	0/1:16,0:16:90.40:90,0,148	1/1:4,1:16:6:102,6,0	1/1:23,0:23:39.28:344,39,0	0/0:22,0:22:48.40:0,48,807	0/1:25,0:24:81.61:82,0,231	0/1:20,0:18:99:173,0,215	0/1:13,0:12:71.15:133,0,71	1/1:18,0:18:3:51,3,0	0/0:22,0:21:0:0,0,0	0/0:21,0:21:23.30:0,23,210	0/0:12,0:12:14.72:0,15,121	0/1:32,0:31:99:115,0,376	1/1:20,0:19:41.71:349,42,0	1/1:22,0:22:30.18:504,30,0	1/1:21,0:21:13.50:320,13,0	1/1:15,0:15:34.31:365,34,0
chr10	55051770	.	G	GA	7845.32	PASS	AB=0.674;AC=29;AF=0.518;AN=56;BaseQRankSum=-15.057;DP=577;FS=1.069;HRun=10;HaplotypeScore=61.9313;InbreedingCoeff=0.8793;MQ=71.62;MQ0=0;MQRankSum=-1.636;QD=23.28;ReadPosRankSum=-0.031;VQSLOD=5.5009;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,31:36:19.30:822,19,0	0/0:14,0:14:26.93:0,27,217	0/0:10,0:10:23.75:0,24,176	0/0:11,0:11:17.07:0,17,145	1/1:3,19:22:54.14:576,54,0	1/1:1,19:20:32.50:551,32,0	1/1:4,15:19:1.84:431,2,0	1/1:10,25:35:78.05:814,78,0	1/1:1,9:10:21.05:224,21,0	1/1:4,21:26:44.32:643,44,0	1/1:7,20:27:54.12:567,54,0	0/0:21,0:22:64.97:0,65,523	0/0:15,0:15:41.95:0,42,345	1/1:3,13:17:47.88:477,48,0	1/1:1,11:12:5.43:263,5,0	0/0:21,0:21:56.92:0,57,468	1/1:3,15:18:36.09:384,36,0	1/1:4,13:17:14.45:359,14,0	0/0:6,0:29:45.26:0,45,130	0/0:1,0:17:28.51:0,29,82	0/0:0,0:17:30.56:0,31,88	0/0:18,0:18:44.95:0,45,369	0/0:13,0:13:35.95:0,36,296	0/0:23,1:24:30.91:0,31,458	1/1:3,33:35:52.97:975,53,0	0/1:15,14:29:18.92:425,0,19	0/0:3,0:29:44.81:0,45,129	1/1:1,11:13:32.92:334,33,0
chr10	55052545	.	T	TGATAGATA	6303.94	PASS	AB=0.765;AC=35;AF=0.673;AN=52;BaseQRankSum=8.052;DP=729;FS=2.041;HRun=0;HaplotypeScore=184.1112;InbreedingCoeff=0.6564;MQ=62.09;MQ0=4;MQRankSum=-0.139;QD=12.41;ReadPosRankSum=-1.565;VQSLOD=3.8246;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:35:20.64:157,21,0	1/1:5,0:14:6.02:208,6,0	./.	./.	1/1:20,0:33:32.91:267,33,0	1/1:21,8:36:12.02:389,12,0	1/1:16,0:24:5.99:49,6,0	0/0:32,0:31:0.94:0,1,2	1/1:9,0:25:32.89:263,33,0	1/1:17,1:33:50.95:574,51,0	1/1:9,0:21:26.90:214,27,0	0/0:27,0:27:42.14:0,42,997	0/0:32,0:32:57.18:0,57,1156	0/0:20,0:20:42.14:0,42,1005	1/1:12,0:27:26.92:216,27,0	1/1:11,14:30:15.05:608,15,0	0/0:34,0:34:60.17:0,60,1273	0/1:25,0:26:15.50:16,0,850	1/1:18,0:25:21:215,21,0	0/1:11,0:27:32.16:275,0,32	0/1:11,0:19:56.10:104,0,56	1/1:17,0:29:26.94:219,27,0	1/1:11,0:26:38.91:317,39,0	0/0:22,0:22:39.12:0,39,857	0/0:31,0:31:69.21:0,69,1509	1/1:13,19:34:60.21:1989,60,0	1/1:19,0:31:14.98:127,15,0	1/1:6,0:10:11.97:97,12,0
chr10	55058754	.	TA	T	10816.37	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-0.969;DP=366;FS=0.000;HRun=2;HaplotypeScore=49.4205;InbreedingCoeff=0.8014;MQ=88.67;MQ0=0;MQRankSum=-8.658;QD=32.78;ReadPosRankSum=4.281;VQSLOD=4.3903;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,27:27:69.22:894,69,0	1/1:0,2:2:6.02:78,6,0	0/0:14,0:14:37.36:0,37,520	0/0:22,0:21:48.94:0,49,774	1/1:0,10:10:27.05:332,27,0	1/1:0,17:17:36.12:466,36,0	1/1:0,18:18:33.11:428,33,0	1/1:0,41:41:99:1446,123,0	1/1:0,11:11:30.03:367,30,0	1/1:0,10:10:30.05:370,30,0	1/1:0,8:8:24.08:311,24,0	1/1:0,7:7:18.06:234,18,0	1/1:0,3:3:6.02:78,6,0	1/1:0,7:7:15.05:195,15,0	1/1:1,8:9:11.97:135,12,0	1/1:0,5:5:15.05:195,15,0	1/1:0,19:19:45.15:583,45,0	1/1:1,19:20:57.16:720,57,0	1/1:0,4:4:12.04:156,12,0	1/1:0,5:5:12.04:156,12,0	1/1:1,21:22:57.18:729,57,0	1/1:0,3:3:9.03:117,9,0	1/1:0,3:3:9.03:117,9,0	1/1:1,12:13:36.12:467,36,0	1/1:0,15:15:42.14:545,42,0	1/1:0,12:12:36.12:463,36,0	1/1:0,16:16:39.13:505,39,0	1/1:1,22:23:50.98:731,51,0
chr10	55058878	.	C	CAT	3526.84	PASS	AB=0.875;AC=24;AF=0.500;AN=48;BaseQRankSum=3.561;DP=328;FS=0.692;HRun=0;HaplotypeScore=95.9786;InbreedingCoeff=0.7052;MQ=45.78;MQ0=5;MQRankSum=-3.269;QD=16.56;ReadPosRankSum=1.622;VQSLOD=3.8097;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	0/0:2,0:2:6.02:0,6,65	0/0:17,0:8:12.03:0,12,140	0/0:30,0:7:7.84:0,8,84	./.	1/1:0,23:23:8.91:94,9,0	./.	1/1:10,41:46:85.80:1436,86,0	1/1:0,15:16:3.01:43,3,0	1/1:2,14:16:24.08:373,24,0	0/1:4,2:5:0.01:0,0,0	0/0:6,0:6:12.04:0,12,168	0/0:2,0:2:6.02:0,6,84	1/1:4,4:8:9.01:108,9,0	1/1:2,12:14:3:49,3,0	0/0:2,0:2:6.02:0,6,65	1/1:13,3:16:11.44:160,11,0	1/1:8,1:9:15.05:183,15,0	0/0:9,0:9:27.08:0,27,364	0/0:2,0:2:3.01:0,3,33	0/0:2,0:2:3.01:0,3,42	./.	0/1:1,0:1:0:0,0,0	0/0:3,0:3:6.02:0,6,84	1/1:4,4:8:8.47:115,8,0	1/1:11,5:16:46.38:688,46,0	0/0:14,0:14:38.95:0,39,437	1/1:1,27:27:18.06:277,18,0
chr10	55058880	.	TAC	T	1092.37	PASS	AB=1.000;AC=20;AF=0.385;AN=52;BaseQRankSum=1.005;DP=321;FS=4.225;HRun=0;HaplotypeScore=103.2006;InbreedingCoeff=0.3848;MQ=45.02;MQ0=6;MQRankSum=-1.144;QD=4.92;ReadPosRankSum=1.819;VQSLOD=2.6165;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:6:3.75:0,4,12	0/0:2,0:2:5.99:0,6,50	0/0:17,0:8:12.01:0,12,114	0/0:30,0:7:8.43:0,8,52	./.	0/1:23,0:23:2.29:2,0,13	0/1:12,0:12:0:0,0,0	1/1:52,0:45:85.17:674,85,0	1/1:16,0:16:2.90:18,3,0	0/1:15,0:15:14.51:37,0,15	0/1:6,0:5:0.02:0,0,0	0/0:5,0:5:11.98:0,12,98	0/0:2,0:2:5.99:0,6,50	1/1:7,0:7:4.99:61,5,0	0/1:13,0:13:2.93:20,0,3	0/0:2,0:2:5.99:0,6,50	1/1:17,0:17:9.84:61,10,0	1/1:8,0:8:12.28:75,12,0	0/0:9,0:9:26.97:0,27,231	0/0:2,0:2:2.04:0,2,6	0/0:2,0:2:2.99:0,3,24	./.	0/1:1,0:1:0:0,0,0	0/0:2,0:2:5.99:0,6,49	0/1:8,0:8:17.04:35,0,17	1/1:16,0:16:32.63:256,33,0	0/0:14,0:14:19.89:0,20,215	0/1:28,0:27:5.85:6,0,21
chr10	55058886	.	T	TAC	553.31	PASS	AB=1.000;AC=20;AF=0.417;AN=48;BaseQRankSum=4.444;DP=302;FS=0.739;HRun=0;HaplotypeScore=117.4518;InbreedingCoeff=0.3392;MQ=39.37;MQ0=6;MQRankSum=0.018;QD=2.69;ReadPosRankSum=3.256;VQSLOD=2.3826;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:7,0:7:2.40:13,2,0	0/0:2,0:2:5.85:0,6,34	./.	0/0:28,0:5:2.98:0,3,21	0/0:6,0:6:0:0,0,0	1/1:20,2:22:2.98:37,3,0	0/0:9,0:9:0:0,0,0	0/1:53,0:46:99:120,0,242	1/1:15,0:15:2.73:22,3,0	1/1:16,1:17:12.06:150,12,0	0/0:8,0:7:2.81:0,3,23	0/0:4,0:4:11.99:0,12,100	./.	1/1:5,1:6:5.74:35,6,0	1/1:11,2:13:2.99:30,3,0	0/0:2,0:2:5.85:0,6,34	0/1:17,0:17:25.91:36,0,26	0/1:8,0:8:0.21:0,0,18	0/0:8,0:8:23.98:0,24,206	0/0:1,0:1:2.90:0,3,16	0/0:2,0:2:2.99:0,3,24	./.	./.	0/0:2,0:2:5.99:0,6,48	0/1:8,0:8:9.43:36,0,9	1/1:13,0:13:15.10:140,15,0	0/0:12,0:12:27.45:0,27,189	1/1:27,0:26:9.62:80,10,0
chr10	55058887	.	A	ACATATACG	3067.88	PASS	AB=0.933;AC=21;AF=0.438;AN=48;BaseQRankSum=4.942;DP=300;FS=1.547;HRun=0;HaplotypeScore=126.5705;InbreedingCoeff=0.4572;MQ=39.06;MQ0=6;MQRankSum=-2.956;QD=14.97;ReadPosRankSum=2.754;VQSLOD=2.8709;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:7,0:7:2.13:15,2,0	0/0:2,0:2:6.02:0,6,126	./.	0/0:28,0:5:2.82:0,3,21	0/0:6,0:6:0:0,0,0	1/1:20,0:21:8.50:286,8,0	0/0:9,0:9:0:0,0,0	0/1:52,0:46:31.56:813,0,32	1/1:15,0:15:2.68:65,3,0	1/1:16,1:17:29.70:547,30,0	0/0:8,0:7:2.71:0,3,17	0/0:4,0:4:12:0,12,146	./.	1/1:6,0:6:6.02:139,6,0	1/1:13,0:13:6.01:144,6,0	0/0:2,0:2:6.02:0,6,120	0/1:17,0:17:55.26:125,0,55	1/1:8,0:8:12.50:227,12,0	0/0:8,0:8:24.07:0,24,487	0/0:1,0:1:3.01:0,3,37	0/0:2,0:2:3.01:0,3,70	./.	./.	0/0:2,0:2:6:0,6,93	0/1:7,2:9:0.11:133,0,0	1/1:13,0:13:33.78:415,34,0	0/0:11,0:11:30.03:0,30,449	1/1:25,1:25:17.94:314,18,0
chr10	55058891	.	A	ACGTATATG	1077.83	PASS	AB=0.982;AC=17;AF=0.354;AN=48;BaseQRankSum=6.196;DP=303;FS=2.733;HRun=0;HaplotypeScore=139.6533;InbreedingCoeff=-0.0106;MQ=39.26;MQ0=6;MQRankSum=-4.572;QD=4.71;ReadPosRankSum=5.737;VQSLOD=2.3472;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:7,0:7:2.57:16,3,0	0/0:2,0:2:6.02:0,6,121	./.	0/0:29,0:6:2.43:0,2,9	0/1:7,0:7:0:0,0,0	1/1:18,1:20:8.90:246,9,0	0/1:9,0:9:0:0,0,0	0/1:56,0:49:53.58:54,0,261	0/1:15,0:15:3.28:3,0,7	0/1:16,1:17:10.89:259,0,11	0/0:8,0:7:2.45:0,2,24	0/0:3,0:3:9.03:0,9,161	./.	0/1:5,1:6:9.82:81,0,10	1/1:11,2:13:6.01:130,6,0	0/0:2,0:2:6.02:0,6,116	0/1:17,0:17:71.10:71,0,76	0/1:9,0:9:37.74:88,0,38	0/0:5,0:5:15.05:0,15,336	0/0:1,0:1:3.01:0,3,55	0/0:2,0:2:3.01:0,3,71	./.	./.	0/0:2,0:2:6.02:0,6,88	0/1:9,0:9:3.82:87,0,4	0/1:12,0:12:41.88:56,0,42	0/0:9,0:9:24.08:0,24,447	0/1:32,0:31:94.46:120,0,94
chr10	55058893	.	A	ACG	783.57	PASS	AB=0.845;AC=15;AF=0.313;AN=48;BaseQRankSum=5.280;DP=288;FS=8.781;HRun=0;HaplotypeScore=111.5348;InbreedingCoeff=-0.0558;MQ=38.93;MQ0=6;MQRankSum=-2.726;QD=3.94;ReadPosRankSum=4.850;VQSLOD=1.7326;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:6,1:7:0:0,0,0	0/0:2,0:2:6.02:0,6,91	./.	0/0:29,0:6:2.99:0,3,23	0/0:5,2:7:2.97:0,3,21	0/1:14,5:20:8.60:52,0,9	0/0:8,1:9:0:0,0,0	0/1:48,2:43:99:196,0,355	0/1:8,7:15:15.26:35,0,15	0/1:12,4:16:41.37:182,0,41	0/0:6,2:7:2.96:0,3,37	0/0:1,0:1:3.01:0,3,46	./.	1/1:4,2:6:5.79:41,6,0	1/1:10,1:11:3:37,3,0	0/0:2,0:2:6.02:0,6,79	0/1:12,3:15:27.94:61,0,28	0/1:8,1:9:4.87:62,0,5	0/0:5,0:5:15.05:0,15,230	0/0:1,0:1:2.99:0,3,24	0/0:2,0:2:3.01:0,3,46	./.	./.	0/0:1,0:1:3.01:0,3,45	0/1:9,1:10:17.38:17,0,47	1/1:7,4:11:2.61:138,3,0	0/0:9,0:9:23.88:0,24,244	0/1:25,4:28:92.02:92,0,116
chr10	55058897	.	A	ATGTG	1967.19	PASS	AB=0.966;AC=22;AF=0.458;AN=48;BaseQRankSum=-2.186;DP=285;FS=8.497;HRun=0;HaplotypeScore=116.1694;InbreedingCoeff=0.1071;MQ=38.21;MQ0=7;MQRankSum=-1.549;QD=8.86;ReadPosRankSum=0.524;VQSLOD=2.1383;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:7,0:7:0:0,0,0	0/0:2,0:2:3.01:0,3,45	./.	0/0:29,0:4:2.17:0,2,10	1/1:6,0:6:3.01:46,3,0	1/1:20,1:21:19.84:237,20,0	0/1:9,0:9:0:0,0,0	0/1:57,0:50:99:720,0,146	1/1:15,0:15:1.62:10,2,0	0/1:15,1:16:19.93:231,0,20	1/1:7,0:6:2.97:20,3,0	0/0:1,0:1:3.01:0,3,49	0/0:3,0:3:0:0,0,0	1/1:3,1:4:3.01:61,3,0	0/1:9,2:11:3.41:66,0,3	0/0:1,0:1:3.01:0,3,49	0/1:14,0:15:57.11:91,0,57	0/1:9,0:9:50.03:50,0,64	0/0:5,0:5:15.05:0,15,257	0/0:1,0:1:3.01:0,3,36	0/0:2,0:2:3.01:0,3,49	./.	./.	./.	1/1:10,0:10:6.64:76,7,0	0/1:10,0:10:62.17:171,0,62	0/0:8,0:8:21.05:0,21,254	1/1:25,0:24:1.99:321,2,0
chr10	55058899	.	A	ATGTG	1266.92	PASS	AB=0.979;AC=18;AF=0.375;AN=48;BaseQRankSum=0.780;DP=283;FS=5.603;HRun=0;HaplotypeScore=117.7169;InbreedingCoeff=0.1574;MQ=38.50;MQ0=7;MQRankSum=-1.652;QD=6.27;ReadPosRankSum=3.054;VQSLOD=2.1721;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:7,0:7:0:0,0,0	0/0:1,0:1:2.98:0,3,22	./.	0/0:27,0:4:2.45:0,2,15	1/1:6,0:6:0.89:2,1,0	1/1:21,0:21:10.89:128,11,0	0/1:9,0:9:0:0,0,0	0/1:57,0:50:39.93:424,0,40	0/0:14,0:14:1.92:0,2,33	1/1:16,1:17:16.17:221,16,0	0/0:8,0:7:0.52:0,1,2	0/0:1,0:1:3.01:0,3,49	0/0:3,0:3:0:0,0,0	1/1:4,0:4:3.01:37,3,0	0/1:12,0:12:3.46:41,0,3	0/0:1,0:1:3.01:0,3,49	0/1:15,0:15:25.67:26,0,39	0/1:9,0:9:14.31:19,0,14	0/0:6,0:6:18.03:0,18,257	0/0:1,0:1:3.01:0,3,36	0/0:2,0:2:3.01:0,3,49	./.	./.	./.	0/1:8,2:10:33.75:152,0,34	0/1:10,0:10:6.21:126,0,6	0/0:8,0:8:21.05:0,21,256	1/1:24,1:24:22.39:224,22,0
chr10	55062188	.	TTAA	T	13971.77	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=17.433;DP=620;FS=1.759;HRun=0;HaplotypeScore=113.2304;InbreedingCoeff=0.9990;MQ=79.20;MQ0=0;MQRankSum=-6.735;QD=40.73;ReadPosRankSum=3.096;VQSLOD=6.3448;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,21:24:51.09:802,51,0	0/0:8,0:8:24.08:0,24,516	0/0:24,0:24:64.54:0,65,1417	0/0:7,0:8:20.96:0,21,424	1/1:1,26:27:68.98:1055,69,0	1/1:0,25:25:63.13:1016,63,0	1/1:2,18:20:51.09:816,51,0	1/1:8,25:33:75.24:1204,75,0	1/1:1,20:21:57.06:884,57,0	1/1:1,25:26:78.20:1235,78,0	1/1:1,25:26:66.10:1035,66,0	0/0:25,0:25:72.25:0,72,1626	0/0:30,0:30:90.31:0,90,2015	1/1:1,20:21:54.18:899,54,0	1/1:2,22:24:54.18:879,54,0	0/0:33,0:33:96.32:0,96,2114	1/1:2,19:21:54.18:899,54,0	1/1:0,13:13:33.11:549,33,0	0/0:15,0:15:39.13:0,39,877	0/0:26,0:26:78.27:0,78,1761	0/0:20,0:20:51.18:0,51,1146	0/0:17,0:17:48.16:0,48,1082	0/0:23,0:23:66.23:0,66,1489	0/0:19,0:19:54.19:0,54,1220	1/1:3,22:25:60.14:963,60,0	1/1:2,25:27:75.26:1249,75,0	0/0:29,0:28:84.29:0,84,1883	1/1:0,10:10:30.10:487,30,0
chr10	55067536	.	GTACT	G	13779.75	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=14.578;DP=659;FS=0.633;HRun=0;HaplotypeScore=118.2492;InbreedingCoeff=0.9968;MQ=84.14;MQ0=4;MQRankSum=-4.584;QD=40.65;ReadPosRankSum=4.575;VQSLOD=5.3305;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,38:39:99:1794,99,0	0/0:8,0:8:21.07:0,21,532	0/0:21,0:21:53.39:0,53,1197	0/0:25,0:25:22.39:0,22,878	1/1:2,22:24:41.73:745,42,0	1/1:3,21:24:51.17:892,51,0	1/1:3,13:16:39.13:707,39,0	0/0:19,0:19:51.16:0,51,1201	1/1:3,24:27:66.23:1198,66,0	1/1:2,23:25:66.20:1148,66,0	1/1:1,17:18:45.15:773,45,0	0/0:21,0:21:60.21:0,60,1565	0/0:21,0:21:60.21:0,60,1556	1/1:4,22:27:51.17:926,51,0	1/1:0,23:23:65.80:1081,66,0	0/0:21,0:21:60.21:0,60,1548	1/1:4,32:36:84.29:1526,84,0	1/1:2,19:20:39.13:708,39,0	0/0:29,0:29:81.28:0,81,2061	0/0:19,0:19:57.17:0,57,1412	0/0:44,0:44:99:0,120,3056	0/0:20,0:20:54.19:0,54,1414	0/0:18,0:18:48.16:0,48,1213	0/0:36,0:36:99:0,102,2597	1/1:2,15:17:36.12:619,36,0	1/1:2,30:29:78.26:1388,78,0	0/0:18,0:18:54.19:0,54,1376	1/1:2,8:10:15.05:273,15,0
chr10	55067725	.	A	AACAG	2308.47	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-8.048;DP=789;FS=0.673;HRun=0;HaplotypeScore=126.7197;InbreedingCoeff=0.9912;MQ=85.06;MQ0=0;MQRankSum=-2.338;QD=53.69;ReadPosRankSum=2.314;VQSLOD=4.5328;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,132,2237	1/1:4,8:12:27.09:686,27,0	0/0:18,0:18:33.11:0,33,562	0/0:35,0:34:93.10:0,93,1538	0/0:29,0:29:81.28:0,81,1450	0/0:29,0:29:81.28:0,81,1441	0/0:32,0:32:84.26:0,84,1437	0/0:36,0:36:87.30:0,87,1546	0/0:32,0:32:87.25:0,87,1475	0/0:29,0:29:78.26:0,78,1371	0/0:18,0:18:51.17:0,51,916	0/0:32,0:32:93.28:0,93,1605	0/0:24,0:24:63.22:0,63,1117	0/0:29,0:29:66.23:0,66,1183	0/0:31,0:31:87.28:0,87,1524	1/1:4,27:31:69.24:1744,69,0	0/0:22,0:22:60.18:0,60,1038	0/0:30,0:30:81.28:0,81,1437	0/0:23,0:23:60.20:0,60,1041	0/0:39,0:39:99:0,99,1760	0/0:30,0:30:84.29:0,84,1488	0/0:22,0:22:57.19:0,57,997	0/0:21,0:21:54.17:0,54,927	0/0:33,0:32:90.28:0,90,1550	0/0:25,0:25:63.22:0,63,1133	0/0:37,0:37:99:0,102,1777	0/0:35,0:35:99:0,99,1757	0/0:6,0:6:15.05:0,15,269
chr10	55068246	.	GAA	G	5889.76	PASS	AB=0.575;AC=30;AF=0.536;AN=56;BaseQRankSum=-0.505;DP=602;FS=0.353;HRun=13;HaplotypeScore=86.1280;InbreedingCoeff=0.8061;MQ=63.51;MQ0=4;MQRankSum=-0.472;QD=17.53;ReadPosRankSum=4.236;VQSLOD=4.2643;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,21:34:37.20:496,37,0	0/1:2,1:7:15.63:16,0,33	0/0:11,0:8:7.58:0,8,105	0/0:6,0:3:7.83:0,8,79	1/1:0,19:19:47.98:456,48,0	1/1:0,15:16:26.98:312,27,0	1/1:7,20:29:59.54:547,60,0	0/0:14,0:27:58.89:0,59,602	1/1:4,16:21:47.80:448,48,0	1/1:5,23:28:53.79:548,54,0	1/1:5,15:21:32.94:370,33,0	0/0:20,0:21:51.16:0,51,720	0/0:19,0:20:46.40:0,46,592	1/1:4,19:25:59.56:547,60,0	1/1:2,19:22:47.80:448,48,0	0/1:5,3:21:70.13:70,0,72	1/1:6,18:28:45.25:485,45,0	1/1:4,11:17:32.22:308,32,0	0/0:13,0:27:54.01:0,54,531	0/0:12,0:27:50.98:0,51,512	0/0:3,0:17:20.52:0,21,180	0/0:25,0:30:61.55:0,62,711	0/0:18,1:20:21.54:0,22,612	0/0:26,0:31:76.10:0,76,908	1/1:3,16:19:41.79:390,42,0	1/1:5,16:23:41.39:362,41,0	0/0:11,1:24:3.69:0,4,273	1/1:0,4:4:9.01:87,9,0
chr10	55071905	.	TAAC	T	4621.07	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=13.223;DP=761;FS=2.904;HRun=0;HaplotypeScore=107.9978;InbreedingCoeff=0.9998;MQ=79.95;MQ0=0;MQRankSum=-2.216;QD=37.88;ReadPosRankSum=3.321;VQSLOD=5.7560;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,132,2852	0/0:10,0:10:30.10:0,30,670	0/0:25,0:25:66.23:0,66,1411	0/0:25,0:25:72.25:0,72,1506	0/0:26,0:26:72.25:0,72,1604	0/0:29,0:29:78.27:0,78,1736	0/0:21,0:21:60.21:0,60,1323	0/0:36,0:36:99:0,102,2256	0/0:32,0:32:93.30:0,93,2013	0/0:29,0:29:81.28:0,81,1790	0/0:23,0:23:63.20:0,63,1364	1/1:0,25:25:69.17:1081,69,0	1/1:2,26:29:75.26:1222,75,0	0/0:25,0:25:75.26:0,75,1674	0/0:30,0:30:84.27:0,84,1812	0/0:28,0:28:78.25:0,78,1698	0/0:25,0:25:75.24:0,75,1611	0/0:22,0:22:57.20:0,57,1267	0/0:23,0:23:63.22:0,63,1364	0/0:38,0:38:99:0,114,2480	0/0:44,0:44:99:0,129,2747	1/1:1,26:27:69.17:1078,69,0	1/1:2,17:19:35.68:540,36,0	1/1:2,20:22:44.75:700,45,0	0/0:22,0:22:60.21:0,60,1339	0/0:37,0:37:99:0,99,2127	0/0:26,0:26:75.26:0,75,1672	0/0:18,0:18:51.18:0,51,1137
chr10	55072418	.	T	TGGGG	1078.10	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=2.350;DP=481;FS=0.830;HRun=7;HaplotypeScore=103.8121;InbreedingCoeff=0.9298;MQ=88.80;MQ0=1;MQRankSum=-4.589;QD=20.73;ReadPosRankSum=-2.045;VQSLOD=-0.0338;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:72.16:0,72,1056	0/0:5,0:5:12.04:0,12,188	0/0:26,0:24:26.13:0,26,623	0/0:24,0:23:45.54:0,46,460	0/0:17,0:17:48.15:0,48,723	0/0:23,0:23:50.93:0,51,761	0/0:22,0:22:43.31:0,43,884	0/0:18,0:18:45.10:0,45,643	0/0:16,0:16:39.10:0,39,603	0/0:16,0:16:36.12:0,36,562	0/0:15,0:15:36.11:0,36,562	1/1:8,6:15:15.05:340,15,0	1/1:3,7:12:24.08:505,24,0	0/0:21,0:21:31.05:0,31,620	0/0:26,0:26:63.15:0,63,952	0/0:19,0:19:54.17:0,54,838	0/0:22,0:22:54.15:0,54,843	0/0:18,0:18:38.99:0,39,551	0/0:15,0:16:41.86:0,42,568	0/0:17,0:17:42.05:0,42,623	0/0:19,0:19:48.16:0,48,750	1/1:5,1:6:11.78:93,12,0	1/1:2,4:6:3.01:75,3,0	1/1:5,4:13:11.99:226,12,0	0/0:11,0:11:24.07:0,24,371	0/0:12,0:12:30.08:0,30,468	0/0:26,0:26:75.22:0,75,1125	0/0:11,0:11:33.11:0,33,507
chr10	55072766	.	T	TAA	8813.55	PASS	AB=0.552;AC=37;AF=0.661;AN=56;BaseQRankSum=-4.101;DP=472;FS=5.517;HRun=9;HaplotypeScore=66.6707;InbreedingCoeff=0.8473;MQ=69.89;MQ0=2;MQRankSum=3.287;QD=23.63;ReadPosRankSum=0.256;VQSLOD=4.1680;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,19:22:39.13:600,39,0	0/0:8,0:8:21.05:0,21,223	0/0:16,0:10:0.76:0,1,132	0/0:12,0:9:11.35:0,11,94	1/1:3,22:25:56.64:807,57,0	1/1:2,15:18:44.98:643,45,0	1/1:4,6:12:20.52:260,21,0	1/1:6,0:26:50.25:173,50,0	1/1:5,8:13:33.10:485,33,0	1/1:6,26:34:80.75:1179,81,0	1/1:6,13:21:50.37:589,50,0	0/0:13,0:13:26.97:0,27,279	0/0:16,0:16:39.04:0,39,405	1/1:0,15:16:35.61:516,36,0	1/1:2,13:15:33.11:508,33,0	0/0:13,0:13:27.02:0,27,287	1/1:1,16:16:39.13:600,39,0	1/1:2,9:11:18.06:277,18,0	1/1:4,0:24:23.54:158,24,0	0/1:3,0:16:26.94:87,0,27	1/1:2,0:5:10.48:50,10,0	0/0:2,0:2:6.01:0,6,63	0/0:11,0:11:24.04:0,24,248	0/0:8,0:8:21.02:0,21,213	1/1:1,25:28:53.67:794,54,0	1/1:2,13:17:44.54:562,45,0	1/1:5,0:38:57.21:197,57,0	1/1:2,10:14:15.62:327,16,0
chr10	55073037	.	C	CAG	10889.86	PASS	AB=0.780;AC=28;AF=0.500;AN=56;BaseQRankSum=-15.089;DP=720;FS=16.198;HRun=0;HaplotypeScore=86.9783;InbreedingCoeff=0.8219;MQ=65.80;MQ0=7;MQRankSum=4.658;QD=27.22;ReadPosRankSum=3.958;VQSLOD=4.9886;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,43:49:96.33:1606,96,0	0/0:4,0:4:12.04:0,12,153	0/0:47,0:25:9.53:0,10,438	0/1:63,0:25:19.29:19,0,129	1/1:2,21:22:36.10:597,36,0	1/1:2,16:18:36.12:598,36,0	1/1:1,19:20:36.12:602,36,0	0/0:40,0:38:78.20:0,78,921	0/1:6,22:28:19.15:796,0,19	1/1:3,20:23:63.18:993,63,0	1/1:1,10:11:18.06:300,18,0	0/0:13,0:13:36.10:0,36,444	0/0:20,0:20:60.18:0,60,747	1/1:3,16:18:39.13:652,39,0	1/1:10,22:32:28.05:1016,28,0	0/0:24,0:24:63.19:0,63,787	1/1:3,23:26:42.14:703,42,0	1/1:5,19:24:29.67:805,30,0	0/0:20,0:19:44.71:0,45,508	0/0:20,0:20:51.16:0,51,647	0/0:28,0:27:69.17:0,69,834	0/0:12,0:12:27.09:0,27,344	0/0:17,0:16:24.07:0,24,301	0/0:37,0:37:78.25:0,78,985	1/1:4,29:32:66.21:1104,66,0	1/1:6,22:28:66.20:1048,66,0	0/0:37,0:37:99:0,99,1243	1/1:0,1:1:3.01:50,3,0
chr10	55073349	.	G	GAGACAGAC	8520.89	PASS	AB=0.815;AC=26;AF=0.481;AN=54;BaseQRankSum=-9.918;DP=818;FS=0.475;HRun=0;HaplotypeScore=180.9364;InbreedingCoeff=0.6868;MQ=58.68;MQ0=11;MQRankSum=-6.084;QD=19.91;ReadPosRankSum=-5.723;VQSLOD=1.7041;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:11,18:30:6.39:423,0,6	0/0:14,0:14:27.09:0,27,617	0/0:24,0:12:2.94:0,3,18	0/1:39,0:21:0:0,0,0	1/1:9,21:30:12.04:495,12,0	1/1:7,22:31:18.05:644,18,0	./.	0/0:32,0:31:51.17:0,51,776	1/1:8,20:29:24.08:991,24,0	1/1:19,0:31:54.17:1207,54,0	1/1:7,14:23:6.01:148,6,0	0/0:6,0:24:30.10:0,30,533	0/0:6,0:24:39.04:0,39,648	1/1:5,20:25:18.06:716,18,0	1/1:9,24:35:21.06:767,21,0	0/1:30,0:30:52.57:53,0,1745	0/1:11,9:21:11.48:118,0,11	1/1:2,7:9:3.01:124,3,0	0/0:31,0:29:54.17:0,54,1151	0/0:35,0:34:60.18:0,60,1407	0/0:40,0:40:66.70:0,67,1506	0/0:11,0:32:42.13:0,42,663	0/0:10,0:30:33.06:0,33,462	0/0:10,0:34:51.15:0,51,811	1/1:12,17:31:9.32:491,9,0	1/1:10,25:35:60.21:1847,60,0	0/0:34,0:34:75.08:0,75,1547	1/1:5,18:25:12.04:497,12,0
chr10	55074676	.	AGT	A	1694.02	PASS	AB=0.854;AC=42;AF=0.840;AN=50;BaseQRankSum=4.023;DP=623;FS=4.606;HRun=0;HaplotypeScore=119.6539;InbreedingCoeff=0.3836;MQ=67.39;MQ0=6;MQRankSum=-2.374;QD=3.45;ReadPosRankSum=0.536;VQSLOD=2.4774;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:18,13:32:17.84:163,18,0	./.	./.	0/0:28,0:21:0.47:0,0,1	0/0:16,0:21:15.03:0,15,180	1/1:15,5:20:15.04:162,15,0	1/1:23,5:27:9.02:97,9,0	./.	0/1:12,6:19:8.29:126,0,8	1/1:16,4:19:7.26:94,7,0	1/1:15,7:22:18.04:187,18,0	1/1:26,0:28:10.34:47,10,0	1/1:15,0:17:8.52:42,9,0	1/1:18,1:19:3.01:32,3,0	0/0:24,0:24:12.03:0,12,159	0/1:28,1:30:14.42:14,0,123	1/1:29,0:35:14.20:70,14,0	1/1:15,0:22:17.04:84,17,0	1/1:10,0:14:2.84:14,3,0	1/1:20,0:22:5.68:28,6,0	1/1:16,0:23:2.84:14,3,0	1/1:11,0:18:22.73:112,23,0	1/1:14,0:21:17.04:84,17,0	1/1:16,0:20:5.68:28,6,0	1/1:10,2:10:6.02:65,6,0	1/1:17,5:22:15.34:144,15,0	1/1:14,0:27:31.25:153,31,0	1/1:11,3:14:6.01:65,6,0
chr10	55075072	.	GCACACACACACA	G	1658.46	PASS	AB=0.778;AC=23;AF=0.575;AN=40;BaseQRankSum=5.028;DP=487;FS=0.000;HRun=0;HaplotypeScore=150.0294;InbreedingCoeff=0.4628;MQ=56.17;MQ0=16;MQRankSum=-2.423;QD=9.11;ReadPosRankSum=1.271;VQSLOD=2.5983;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	1/1:5,0:6:3.01:84,3,0	./.	./.	1/1:9,0:11:9.03:164,9,0	1/1:8,0:8:3.01:84,3,0	./.	0/0:24,0:22:8.95:0,9,85	1/1:11,0:12:3:25,3,0	0/0:11,0:9:3.01:0,3,79	./.	1/1:11,0:15:3.01:84,3,0	1/1:10,1:16:9.03:270,9,0	./.	1/1:8,3:11:3.01:102,3,0	1/1:8,0:9:3.01:84,3,0	1/1:31,9:40:17.86:491,18,0	0/1:15,6:20:24.80:241,0,25	0/0:14,0:14:15.97:0,16,473	0/0:14,0:13:3.01:0,3,66	0/0:25,0:37:21.07:0,21,854	1/1:12,0:15:3.48:85,3,0	1/1:9,0:13:3.01:84,3,0	0/0:37,0:36:0.47:0,0,1	./.	0/0:18,0:18:3.93:0,4,13	0/0:24,0:22:33.11:0,33,1467	./.
chr10	55075408	.	AT	A	12363.69	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=11.726;DP=624;FS=1.691;HRun=1;HaplotypeScore=64.9384;InbreedingCoeff=0.9981;MQ=82.46;MQ0=0;MQRankSum=-3.586;QD=37.58;ReadPosRankSum=3.192;VQSLOD=5.4337;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,33:33:96.32:1342,96,0	0/0:6,0:6:18.06:0,18,288	0/0:22,0:23:52.03:0,52,864	0/0:23,0:22:55.02:0,55,880	1/1:0,24:23:69.23:964,69,0	1/1:0,24:24:63.21:881,63,0	1/1:0,29:29:69.23:965,69,0	0/0:21,0:21:63.14:0,63,955	1/1:0,27:27:69.23:962,69,0	1/1:0,15:15:45.12:606,45,0	1/1:0,9:9:21.06:280,21,0	0/0:25,0:25:72.23:0,72,1120	0/0:24,0:24:72.25:0,72,1148	1/1:0,26:26:75.25:1043,75,0	1/1:0,23:23:50.80:713,51,0	0/0:16,0:16:48.16:0,48,767	1/1:0,33:33:93.31:1300,93,0	1/1:0,32:32:81.27:1133,81,0	0/0:27,0:27:81.12:0,81,1188	0/0:10,0:10:30.10:0,30,474	0/0:33,0:33:99:0,99,1579	0/0:18,0:18:54.18:0,54,862	0/0:13,0:13:39.13:0,39,621	0/0:27,0:27:81.23:0,81,1264	1/1:0,18:18:48.16:671,48,0	1/1:0,27:27:81.27:1129,81,0	0/0:29,0:29:84.29:0,84,1335	1/1:0,9:9:27.09:377,27,0
chr10	55076312	.	TG	T	8241.12	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=11.001;DP=653;FS=1.708;HRun=6;HaplotypeScore=66.3163;InbreedingCoeff=0.9918;MQ=85.30;MQ0=0;MQRankSum=-7.134;QD=27.47;ReadPosRankSum=5.022;VQSLOD=5.2787;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,29:30:78.19:835,78,0	0/0:16,0:16:39.13:0,39,513	0/0:22,0:22:56.64:0,57,657	0/0:22,0:22:47.96:0,48,574	1/1:1,13:14:33.08:355,33,0	1/1:2,13:15:39.08:410,39,0	1/1:1,25:26:72.18:774,72,0	0/0:39,0:39:99:0,105,1308	1/1:2,17:19:51.13:548,51,0	1/1:4,25:29:69.17:742,69,0	1/1:4,11:15:27.07:290,27,0	0/0:23,0:23:66.21:0,66,868	0/0:26,0:26:72.23:0,72,946	1/1:0,24:24:63.16:677,63,0	1/1:0,25:25:66.17:709,66,0	0/0:39,0:39:99:0,108,1394	1/1:2,34:36:96.24:1032,96,0	1/1:1,19:20:54.14:580,54,0	0/0:15,0:15:39.13:0,39,513	0/0:20,0:20:57.18:0,57,739	0/0:31,0:30:87.28:0,87,1145	0/0:22,0:22:66.17:0,66,823	0/0:24,0:24:69.21:0,69,892	0/0:22,0:22:66.20:0,66,854	1/1:2,13:15:33.08:355,33,0	1/1:3,26:29:78.20:837,78,0	0/0:32,0:32:96.30:0,96,1246	1/1:0,3:3:9.02:97,9,0
chr10	55077893	.	TC	T	11425.04	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=13.361;DP=680;FS=3.761;HRun=3;HaplotypeScore=69.0454;InbreedingCoeff=0.9999;MQ=91.02;MQ0=0;MQRankSum=-4.736;QD=32.74;ReadPosRankSum=5.526;VQSLOD=5.0695;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,55:56:99:1673,135,0	0/0:10,0:10:30.10:0,30,431	0/0:35,0:35:99:0,99,1340	0/0:23,0:23:48.16:0,48,691	1/1:3,18:21:45.14:558,45,0	1/1:0,17:17:48.15:595,48,0	1/1:0,13:13:36.11:446,36,0	0/0:28,0:28:78.25:0,78,1103	1/1:0,23:23:63.20:781,63,0	1/1:2,24:26:63.19:776,63,0	1/1:0,17:17:48.15:594,48,0	0/0:18,0:18:54.17:0,54,759	0/0:25,0:25:75.22:0,75,1023	1/1:0,22:22:63.20:781,63,0	1/1:0,29:29:81.25:1004,81,0	0/0:18,0:18:54.17:0,54,760	1/1:0,35:35:90.28:1116,90,0	1/1:0,20:20:60.19:744,60,0	0/0:25,0:25:72.21:0,72,992	0/0:23,0:23:66.19:0,66,907	0/0:34,0:34:99:0,99,1404	0/0:22,0:22:64.42:0,64,852	0/0:18,0:18:42.12:0,42,569	0/0:34,0:34:99:0,102,1463	1/1:3,22:25:59.79:743,60,0	1/1:0,33:33:96.28:1171,96,0	0/0:18,0:18:51.14:0,51,695	1/1:1,11:12:36.11:444,36,0
chr10	55080322	.	ATCCCCAGCCCC	A	83.23	PASS	AC=2;AF=0.100;AN=20;BaseQRankSum=3.633;DP=143;FS=15.168;HRun=0;HaplotypeScore=115.4423;InbreedingCoeff=0.9556;MQ=65.62;MQ0=7;MQRankSum=3.201;QD=16.65;ReadPosRankSum=-3.366;VQSLOD=0.6191;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:6,0:6:15.05:0,15,769	0/0:12,0:9:27.08:0,27,1428	0/0:8,0:7:18.06:0,18,1032	./.	./.	./.	0/0:17,0:16:48.16:0,48,2399	./.	./.	./.	./.	./.	./.	./.	0/0:10,0:10:27.09:0,27,1602	./.	./.	0/0:20,0:19:54.19:0,54,2694	0/0:14,0:14:36.12:0,36,2001	0/0:25,0:24:72.25:0,72,4257	./.	./.	./.	./.	1/1:0,5:5:14.98:166,15,0	0/0:23,0:21:60.21:0,60,3389	./.
chr10	55080504	.	TTTG	T	9794.26	PASS	AB=0.579;AC=27;AF=0.482;AN=56;BaseQRankSum=14.422;DP=719;FS=4.250;HRun=0;HaplotypeScore=108.7604;InbreedingCoeff=0.9360;MQ=77.10;MQ0=2;MQRankSum=-2.507;QD=28.98;ReadPosRankSum=4.154;VQSLOD=4.9021;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,22:30:48.16:679,48,0	0/0:5,0:5:15.05:0,15,294	0/0:32,0:26:32.39:0,32,605	0/0:49,0:48:61.04:0,61,1147	1/1:6,21:27:60.17:836,60,0	1/1:2,22:24:63.17:888,63,0	0/1:6,16:22:7.95:360,0,8	0/0:39,0:39:81.26:0,81,1504	1/1:3,25:28:47.95:670,48,0	1/1:6,16:22:51.17:725,51,0	1/1:6,13:19:36.02:467,36,0	0/0:22,0:22:60.21:0,60,1167	0/0:30,0:30:66.23:0,66,1289	1/1:4,14:18:33.11:477,33,0	1/1:6,16:22:48.16:694,48,0	0/0:26,0:26:69.21:0,69,1280	1/1:8,30:39:78.21:1104,78,0	1/1:4,13:17:33.11:476,33,0	0/0:16,0:16:42.14:0,42,794	0/0:16,0:16:33.11:0,33,675	0/0:33,0:33:75.24:0,75,1365	0/0:33,0:33:87.27:0,87,1649	0/0:21,0:21:53.75:0,54,923	0/0:27,1:28:34.84:0,35,1383	1/1:5,19:24:51.17:738,51,0	1/1:6,21:27:63.21:899,63,0	0/0:31,0:31:75.25:0,75,1470	1/1:1,18:19:54.18:781,54,0
chr10	55083201	.	GT	G	11766.61	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=9.942;DP=660;FS=1.360;HRun=5;HaplotypeScore=66.3328;InbreedingCoeff=0.9973;MQ=89.70;MQ0=0;MQRankSum=-6.428;QD=28.15;ReadPosRankSum=6.658;VQSLOD=4.5329;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,35:37:96.27:1088,96,0	0/0:11,0:11:30.09:0,30,382	0/0:29,0:28:72.17:0,72,913	0/0:34,0:34:90.70:0,91,1150	1/1:2,15:17:36.03:389,36,0	1/1:2,16:18:39.11:437,39,0	1/1:1,25:26:59.86:680,60,0	0/0:34,0:34:84.25:0,84,1090	1/1:1,11:12:30.09:340,30,0	1/1:1,22:23:63.18:714,63,0	1/1:0,6:6:15.04:167,15,0	1/1:1,21:22:57.15:637,57,0	1/1:2,23:25:69.20:782,69,0	1/1:1,20:21:54.15:612,54,0	1/1:1,28:29:72.21:816,72,0	0/0:25,0:25:72.23:0,72,971	1/1:3,27:30:60.17:680,60,0	1/1:3,26:29:66.19:748,66,0	0/0:21,0:21:63.17:0,63,809	0/0:29,0:29:81.25:0,81,1084	0/0:22,0:22:63.20:0,63,846	1/1:2,14:16:45.12:502,45,0	1/1:0,24:24:65.97:746,66,0	1/1:1,28:29:69.20:782,69,0	1/1:2,17:19:42.12:475,42,0	1/1:0,24:24:72.17:797,72,0	0/0:37,0:35:99:0,111,1492	1/1:0,11:11:33.09:374,33,0
chr10	55084120	.	AG	A	1156.84	PASS	AC=10;AF=0.185;AN=54;BaseQRankSum=-4.431;DP=342;FS=6.559;HRun=6;HaplotypeScore=52.5230;InbreedingCoeff=0.9210;MQ=62.21;MQ0=1;MQRankSum=-3.688;QD=21.83;ReadPosRankSum=4.064;VQSLOD=2.7762;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:5.98:0,6,61	0/0:4,0:4:12.04:0,12,164	0/0:19,0:15:12.61:0,13,230	0/0:15,0:13:21.04:0,21,263	0/0:13,0:13:30.10:0,30,409	0/0:14,0:14:39.09:0,39,511	0/0:16,0:16:42.05:0,42,523	0/0:10,0:8:18.05:0,18,230	0/0:9,0:9:21.07:0,21,286	0/0:16,0:16:23.80:0,24,327	0/0:19,0:19:51.11:0,51,646	1/1:0,13:13:33.09:374,33,0	1/1:0,6:6:18.05:204,18,0	0/0:17,0:17:45.05:0,45,570	0/0:17,0:17:47.18:0,47,604	0/0:11,0:11:33.07:0,33,429	0/0:8,0:8:9.03:0,9,122	0/0:13,0:13:15.01:0,15,184	0/0:13,0:11:27.09:0,27,368	0/0:7,0:6:18.06:0,18,245	0/0:9,0:9:21.07:0,21,287	1/1:2,7:9:21.06:238,21,0	1/1:0,12:12:36.10:408,36,0	1/1:2,11:12:9.03:102,9,0	./.	0/0:14,0:14:36.03:0,36,463	0/0:9,0:9:24.08:0,24,328	0/0:7,0:7:21.07:0,21,287
chr10	55084131	.	T	TG	1896.13	PASS	AC=24;AF=0.462;AN=52;BaseQRankSum=-4.826;DP=267;FS=2.239;HRun=1;HaplotypeScore=39.3651;InbreedingCoeff=0.8565;MQ=58.42;MQ0=1;MQRankSum=-3.046;QD=14.47;ReadPosRankSum=-0.009;VQSLOD=2.9140;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/0:4,0:4:8.94:0,9,67	0/0:12,0:9:11.50:0,11,143	0/0:9,0:8:1:0,1,58	1/1:10,0:10:29.23:172,29,0	1/1:13,0:13:38.04:221,38,0	1/1:11,0:11:32.55:222,33,0	0/0:6,0:4:11.98:0,12,104	1/1:8,0:8:20.48:119,20,0	1/1:10,0:10:17.90:143,18,0	1/1:17,0:17:46.58:261,47,0	0/0:11,0:11:30.96:0,31,210	0/0:6,0:6:17.81:0,18,120	1/1:13,0:13:38.29:247,38,0	1/1:16,0:16:47.05:320,47,0	0/0:10,0:10:8.75:0,9,141	1/1:4,0:4:3.01:37,3,0	1/1:11,0:11:6.02:71,6,0	0/0:6,0:4:6.42:0,6,43	0/0:7,0:6:13.23:0,13,104	0/0:6,0:6:9.42:0,9,73	0/0:7,0:7:20.78:0,21,140	0/0:11,0:11:32.61:0,33,221	0/0:9,0:8:8.85:0,9,56	./.	1/1:4,8:12:26.62:179,27,0	0/0:8,0:8:20.86:0,21,155	1/1:6,0:6:17.63:107,18,0
chr10	55084132	.	G	GGT	2014.34	PASS	AC=24;AF=0.462;AN=52;BaseQRankSum=-5.525;DP=258;FS=5.377;HRun=0;HaplotypeScore=41.5003;InbreedingCoeff=0.8624;MQ=58.59;MQ0=1;MQRankSum=-1.541;QD=15.99;ReadPosRankSum=0.266;VQSLOD=2.5747;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	0/0:3,0:3:8.94:0,9,66	0/0:13,0:9:12.92:0,13,137	0/0:10,0:8:0.27:0,0,52	1/1:10,0:10:29.23:172,29,0	1/1:13,0:13:38.04:221,38,0	1/1:11,0:11:32.55:222,33,0	0/0:6,0:4:12.02:0,12,113	1/1:7,0:7:20.48:119,20,0	1/1:0,10:10:17.91:171,18,0	1/1:16,0:16:46.58:261,47,0	0/0:11,0:11:30.96:0,31,210	0/0:6,0:6:17.81:0,18,120	1/1:13,0:13:38.29:247,38,0	1/1:16,0:16:47.05:340,47,0	0/0:9,0:9:8.75:0,9,141	1/1:0,4:4:3.01:59,3,0	1/1:0,9:9:6.02:120,6,0	0/0:5,0:3:8.63:0,9,52	0/0:7,0:6:13.19:0,13,104	0/0:5,0:5:11.29:0,11,86	0/0:7,0:7:20.78:0,21,140	0/0:11,0:11:32.61:0,33,221	0/0:9,0:8:8.85:0,9,56	./.	1/1:11,0:11:26.63:179,27,0	0/0:8,0:8:23.78:0,24,172	1/1:6,0:6:17.63:107,18,0
chr10	55085161	.	AG	A	501.08	PASS	AC=10;AF=0.192;AN=52;BaseQRankSum=1.530;DP=203;FS=1.298;HRun=6;HaplotypeScore=67.0685;InbreedingCoeff=0.7764;MQ=70.35;MQ0=0;MQRankSum=-3.352;QD=19.27;ReadPosRankSum=1.180;VQSLOD=3.2919;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:10:24.08:0,24,320	0/0:1,0:1:3.01:0,3,41	0/0:16,0:13:29.68:0,30,317	0/0:6,1:5:3.51:0,4,50	0/0:7,0:7:9.03:0,9,122	0/0:6,0:6:18.06:0,18,239	0/0:12,0:12:30.10:0,30,390	0/0:9,0:8:18.06:0,18,246	0/0:4,0:4:12.04:0,12,157	0/0:4,0:4:12.04:0,12,160	0/0:1,0:1:3.01:0,3,41	1/1:1,4:5:11.99:120,12,0	1/1:0,5:5:15.04:169,15,0	0/0:5,0:5:15.03:0,15,186	0/0:13,0:13:36.11:0,36,472	0/0:11,0:11:33.07:0,33,429	0/0:13,0:13:30.10:0,30,402	0/0:3,0:3:9.03:0,9,123	0/0:12,0:11:32.99:0,33,404	0/0:3,0:3:6.02:0,6,82	0/0:16,0:16:42.14:0,42,565	1/1:0,5:5:15.04:170,15,0	1/1:0,2:2:6.02:68,6,0	1/1:3,6:9:12.03:131,12,0	./.	0/0:9,0:9:27.09:0,27,368	0/0:12,0:12:36.12:0,36,487	./.
chr10	55085172	.	T	TG	4603.13	PASS	AC=36;AF=0.667;AN=54;BaseQRankSum=2.765;DP=288;FS=50.028;HRun=1;HaplotypeScore=76.3473;InbreedingCoeff=0.8769;MQ=65.45;MQ0=0;MQRankSum=-8.258;QD=28.59;ReadPosRankSum=2.162;VQSLOD=1.6118;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,16:18:26.95:398,27,0	0/0:1,0:1:3.01:0,3,38	0/0:25,0:22:8.09:0,8,500	0/0:12,0:10:14.44:0,14,173	1/1:1,7:8:14.84:195,15,0	1/1:1,6:7:18.06:267,18,0	1/1:3,13:16:45.15:652,45,0	0/0:16,0:15:33.02:0,33,405	1/1:0,6:6:18.06:267,18,0	1/1:0,5:5:15.05:223,15,0	1/1:0,1:1:3.01:44,3,0	1/1:8,0:8:14.20:72,14,0	1/1:10,0:10:19.97:104,20,0	1/1:1,5:6:15.05:221,15,0	1/1:0,15:15:45.15:666,45,0	0/0:15,0:15:39.13:0,39,501	1/1:2,11:13:25.72:478,26,0	1/1:0,5:5:12.04:179,12,0	0/0:15,0:15:44.51:0,45,550	0/0:6,0:6:12.04:0,12,154	0/0:18,0:18:45.15:0,45,580	1/1:8,0:8:23.29:129,23,0	1/1:9,0:9:17.01:87,17,0	1/1:14,0:14:23.11:131,23,0	1/1:0,1:1:3.01:44,3,0	1/1:0,10:10:30.10:445,30,0	0/0:17,0:17:45.14:0,45,578	./.
chr10	55085173	.	G	GT	3201.19	PASS	AB=1.000;AC=35;AF=0.648;AN=54;BaseQRankSum=5.941;DP=293;FS=39.986;HRun=8;HaplotypeScore=81.8550;InbreedingCoeff=0.7456;MQ=66.62;MQ0=0;MQRankSum=-7.854;QD=19.76;ReadPosRankSum=2.279;VQSLOD=1.5385;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:18:26.82:226,27,0	0/0:1,0:1:3:0,3,27	0/0:26,0:23:2.81:0,3,339	0/0:13,0:11:2.62:0,3,104	1/1:8,0:8:11.84:100,12,0	1/1:7,0:7:1.68:128,2,0	1/1:16,0:16:44.83:362,45,0	0/0:16,0:15:32.98:0,33,295	1/1:6,0:6:17.96:146,18,0	1/1:5,0:5:14.98:122,15,0	1/1:1,0:1:2.99:24,3,0	1/1:0,8:8:15.04:173,15,0	1/1:0,10:10:21.06:242,21,0	0/1:6,0:6:2.15:103,0,2	1/1:15,0:15:44.91:370,45,0	0/0:15,0:15:42:0,42,380	1/1:13,0:13:8.50:245,9,0	1/1:6,0:6:11.94:88,12,0	0/0:16,0:16:42.01:0,42,384	0/0:6,0:6:12:0,12,110	0/0:18,0:18:45.02:0,45,412	1/1:0,8:8:24.07:277,24,0	1/1:1,8:9:21.03:228,21,0	1/1:1,13:14:27.04:296,27,0	1/1:1,0:1:2.99:24,3,0	1/1:10,0:10:29.89:238,30,0	0/0:17,0:17:48.01:0,48,434	./.
chr10	55085199	.	G	GTTGTT	5584.58	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=1.245;DP=395;FS=58.526;HRun=0;HaplotypeScore=127.5940;InbreedingCoeff=0.8535;MQ=52.14;MQ0=0;MQRankSum=-8.632;QD=36.98;ReadPosRankSum=2.927;VQSLOD=2.1071;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,8:20:21.07:618,21,0	0/0:3,0:3:9.03:0,9,160	0/0:22,0:19:32.78:0,33,546	0/0:19,0:19:9.02:0,9,511	1/1:1,3:5:6.02:176,6,0	1/1:3,6:9:9.03:265,9,0	1/1:5,12:19:27.09:794,27,0	0/0:26,0:26:60.20:0,60,1077	1/1:2,9:11:15.05:441,15,0	1/1:2,5:7:15.05:394,15,0	1/1:2,0:2:2.97:20,3,0	0/0:19,0:19:48.16:0,48,887	0/0:12,0:12:20.97:0,21,302	1/1:4,6:11:3.01:88,3,0	1/1:7,10:21:39.13:1110,39,0	0/0:20,0:20:57.10:0,57,989	1/1:5,12:20:23.53:891,24,0	1/1:5,3:9:15.05:392,15,0	0/0:27,0:25:63.14:0,63,1013	0/0:11,0:11:27.09:0,27,474	0/0:18,0:18:45.15:0,45,863	0/0:18,0:18:38.98:0,39,632	0/0:12,0:12:27.09:0,27,491	0/0:16,0:16:36.06:0,36,661	1/1:1,1:2:3.01:88,3,0	1/1:10,2:12:12.04:264,12,0	0/0:21,0:21:60.01:0,60,1039	1/1:1,2:1:3.01:42,3,0
chr10	55085587	.	T	TATA	10010.60	PASS	AB=0.560;AC=37;AF=0.661;AN=56;BaseQRankSum=0.837;DP=401;FS=0.000;HRun=0;HaplotypeScore=53.6314;InbreedingCoeff=0.7914;MQ=46.88;MQ0=26;MQRankSum=-0.264;QD=36.27;ReadPosRankSum=3.269;VQSLOD=5.3236;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,16:16:30.10:617,30,0	0/0:7,0:7:21.07:0,21,328	0/0:3,0:2:3.01:0,3,47	0/0:5,0:3:9.03:0,9,132	1/1:5,15:20:24.08:459,24,0	1/1:1,31:32:78.27:1687,78,0	0/1:3,11:14:43.85:365,0,44	0/0:31,0:28:60.19:0,60,897	1/1:2,5:5:9.03:194,9,0	1/1:1,8:9:21.07:455,21,0	1/1:3,13:14:21.07:454,21,0	1/1:2,9:10:15.05:324,15,0	1/1:3,13:16:30.10:648,30,0	1/1:4,5:7:9.03:195,9,0	1/1:2,5:7:3.01:65,3,0	0/0:13,0:11:33.08:0,33,477	1/1:4,21:25:48.16:1038,48,0	1/1:3,12:13:30.10:649,30,0	0/0:15,0:12:30.03:0,30,395	0/0:13,0:13:24.07:0,24,339	0/0:9,0:7:15.01:0,15,208	1/1:2,6:8:6.02:129,6,0	1/1:0,6:8:3.01:65,3,0	1/1:1,6:7:15.05:325,15,0	1/1:0,14:14:30.10:647,30,0	1/1:5,18:22:54.18:1112,54,0	0/0:29,0:29:69.02:0,69,1031	1/1:3,10:11:27.09:585,27,0
chr10	55088965	.	T	TACAC	1114.80	PASS	AB=0.921;AC=22;AF=0.440;AN=50;BaseQRankSum=-1.856;DP=613;FS=6.270;HRun=0;HaplotypeScore=131.1967;InbreedingCoeff=0.3501;MQ=66.74;MQ0=16;MQRankSum=-0.165;QD=3.42;ReadPosRankSum=-1.441;VQSLOD=1.9531;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:39,0:38:11.19:153,11,0	0/0:12,0:12:0:0,0,0	./.	./.	1/1:14,0:14:3.01:66,3,0	0/0:18,0:18:14.83:0,15,122	0/1:20,0:21:11.97:12,0,62	1/1:24,0:21:0.47:1,0,0	1/1:10,0:9:6.91:104,7,0	1/1:17,0:17:0.47:1,0,0	0/0:23,0:23:3:0,3,31	0/0:23,0:22:4.31:0,4,40	0/1:20,0:20:0.58:1,0,12	1/1:21,0:21:9:128,9,0	1/1:25,0:23:15.02:200,15,0	0/0:8,0:11:5.54:0,6,55	0/1:22,14:42:31.74:128,0,32	1/1:17,1:26:16.12:193,16,0	./.	0/0:10,0:10:3:0,3,26	0/1:43,0:40:8.74:9,0,104	0/0:10,0:10:1.24:0,1,4	0/0:11,0:11:2.78:0,3,23	0/0:49,0:49:29.68:0,30,235	1/1:22,0:22:17.80:267,18,0	0/0:19,0:19:0.61:0,1,22	0/0:20,0:20:1.17:0,1,42	0/0:8,0:8:5.99:0,6,65
chr10	55088967	.	C	CGCTT	1282.23	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=7.866;DP=632;FS=4.707;HRun=0;HaplotypeScore=131.3078;InbreedingCoeff=0.9587;MQ=63.26;MQ0=18;MQRankSum=-2.990;QD=11.35;ReadPosRankSum=-3.313;VQSLOD=2.6063;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:41:49.27:0,49,779	0/0:13,0:13:29.31:0,29,612	0/0:28,0:23:69.22:0,69,1360	0/0:28,0:16:45.61:0,46,832	0/0:15,0:15:30.99:0,31,617	0/0:21,0:20:39.39:0,39,692	0/0:23,0:23:63.20:0,63,1182	0/0:23,0:20:54.76:0,55,881	0/0:11,0:10:11.26:0,11,155	0/0:17,0:17:45.62:0,46,852	0/0:23,0:22:57.20:0,57,1126	1/1:22,0:21:17.17:234,17,0	1/1:20,0:20:10.80:203,11,0	0/0:23,0:23:50.71:0,51,828	0/0:23,0:21:39.77:0,40,633	0/0:11,0:11:21.44:0,21,388	0/0:44,0:43:56.30:0,56,1027	0/0:27,0:26:42.13:0,42,698	0/0:13,0:13:34.75:0,35,544	0/0:10,0:10:27.09:0,27,543	0/0:49,0:46:99:0,102,1968	1/1:9,0:9:19.38:279,19,0	1/1:3,8:11:7.79:100,8,0	1/1:50,0:51:42.55:632,43,0	0/0:24,0:24:49:0,49,786	0/0:19,0:19:52.88:0,53,974	0/0:24,0:23:53.01:0,53,976	0/0:8,0:8:24.03:0,24,364
chr10	55088969	.	C	CTT	1268.54	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=8.755;DP=629;FS=2.685;HRun=0;HaplotypeScore=93.7807;InbreedingCoeff=0.9530;MQ=60.91;MQ0=18;MQRankSum=-2.785;QD=11.13;ReadPosRankSum=-2.598;VQSLOD=2.8338;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:38:43.27:0,43,543	0/0:13,0:13:29.32:0,29,448	0/0:26,0:21:63.21:0,63,1008	0/0:27,0:15:42.61:0,43,642	0/0:16,0:16:33.07:0,33,469	0/0:21,0:20:32.67:0,33,490	0/0:27,0:27:72.08:0,72,1016	0/0:23,0:20:53.43:0,53,665	0/0:11,0:10:10.11:0,10,118	0/0:17,0:17:48.52:0,49,673	0/0:23,0:22:57.19:0,57,844	1/1:4,16:20:13.93:235,14,0	1/1:4,17:22:12.98:219,13,0	0/0:22,0:22:50.55:0,51,662	0/0:23,0:21:39.05:0,39,507	0/0:11,0:11:21.91:0,22,279	0/0:44,0:43:60.73:0,61,783	0/0:26,0:25:51.76:0,52,626	0/0:12,0:12:35.53:0,36,439	0/0:10,0:10:27.08:0,27,390	0/0:53,0:50:99:0,107,1522	1/1:2,6:8:16.40:201,16,0	1/1:10,1:11:7.79:98,8,0	1/1:14,37:52:39.33:681,39,0	0/0:25,0:25:44.57:0,45,528	0/0:18,0:18:52.57:0,53,737	0/0:23,0:22:57.29:0,57,763	0/0:5,0:5:15.05:0,15,234
chr10	55090759	.	AACACACACACACAC	A	858.60	PASS	AB=0.981;AC=9;AF=0.173;AN=52;BaseQRankSum=1.850;DP=453;FS=1.205;HRun=0;HaplotypeScore=163.3620;InbreedingCoeff=0.3721;MQ=68.93;MQ0=18;MQRankSum=-3.800;QD=9.54;ReadPosRankSum=-0.229;VQSLOD=2.3283;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:26:21.06:0,21,512	1/1:3,6:9:9.03:316,9,0	0/0:31,0:13:2.99:0,3,24	0/0:30,0:23:15:0,15,237	0/0:5,0:6:3.01:0,3,63	0/0:10,0:10:6.02:0,6,122	0/0:18,0:18:9.02:0,9,175	0/1:16,0:15:97.81:98,0,127	0/0:20,0:21:31.66:0,32,610	0/0:18,0:16:32.97:0,33,435	0/0:15,0:16:21.06:0,21,454	0/0:12,0:12:15.52:0,16,655	0/0:12,0:12:18.06:0,18,556	0/0:9,0:10:15.05:0,15,225	0/0:12,0:16:15.93:0,16,250	1/1:8,11:19:12.04:423,12,0	0/0:14,0:12:3.81:0,4,74	./.	0/1:16,0:16:41.35:43,0,41	0/0:4,0:12:5.91:0,6,64	0/1:16,0:14:40.74:41,0,42	0/0:15,0:15:24.08:0,24,792	0/0:9,0:9:9.03:0,9,370	0/0:25,0:24:33.11:0,33,1099	0/0:8,0:20:10.24:0,10,158	0/0:17,0:17:25.49:0,25,413	1/1:6,0:12:5.07:78,5,0	./.
chr10	55090827	.	GACAGAGAC	G	2992.84	PASS	AB=1.000;AC=43;AF=0.896;AN=48;BaseQRankSum=-2.724;DP=557;FS=1.786;HRun=0;HaplotypeScore=98.4309;InbreedingCoeff=0.1237;MQ=27.82;MQ0=108;MQRankSum=0.739;QD=6.10;ReadPosRankSum=-1.553;VQSLOD=1.6152;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:19:1.55:4,2,0	1/1:11,0:11:7.97:45,8,0	./.	./.	./.	1/1:19,0:16:5.62:46,6,0	0/1:20,0:10:0.05:0,0,0	1/1:11,33:34:94.73:760,95,0	1/1:25,0:19:10.58:76,11,0	1/1:27,0:20:53.46:467,53,0	1/1:18,0:18:2.84:14,3,0	1/1:13,0:9:3.46:24,3,0	1/1:14,0:12:5.48:53,5,0	1/1:20,0:17:5.84:33,6,0	1/1:17,0:15:5.95:53,6,0	1/1:17,0:17:9.46:67,9,0	0/1:21,0:13:35.42:107,0,35	0/1:26,0:19:28.36:34,0,28	1/1:10,5:14:36.30:326,36,0	1/1:19,0:15:4.52:48,5,0	0/0:28,0:12:2.90:0,3,16	1/1:21,0:20:3.01:68,3,0	1/1:12,0:6:3:25,3,0	1/1:33,0:17:12.01:133,12,0	1/1:19,0:17:3.01:37,3,0	1/1:28,0:23:56.54:508,57,0	1/1:13,0:11:16.33:171,16,0	./.
chr10	55090829	.	C	CAG	886.47	PASS	AB=1.000;AC=30;AF=0.652;AN=46;BaseQRankSum=-1.179;DP=547;FS=1.063;HRun=0;HaplotypeScore=86.0546;InbreedingCoeff=0.1966;MQ=27.50;MQ0=106;MQRankSum=-0.369;QD=2.30;ReadPosRankSum=-3.122;VQSLOD=0.4073;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:19:0:0,0,0	0/1:12,0:11:2.08:2,0,10	./.	./.	./.	1/1:19,0:15:2.59:14,3,0	0/1:21,0:11:0:0,0,0	1/1:43,0:33:14.38:124,14,0	1/1:24,0:19:2.21:8,2,0	1/1:29,0:21:32.92:354,33,0	./.	0/0:12,0:8:2.92:0,3,17	0/1:15,0:12:7.22:7,0,46	0/0:9,11:17:0.87:0,1,2	1/1:17,1:15:2.84:8,3,0	0/0:19,0:17:3.26:0,3,21	0/1:21,0:13:33.09:33,0,62	0/1:26,0:19:12.93:13,0,20	0/1:13,0:13:2.74:59,0,3	1/1:18,0:14:3.35:16,3,0	0/0:26,0:11:3.01:0,3,35	1/1:22,0:20:3.01:43,3,0	1/1:12,0:6:0.47:1,0,0	1/1:32,0:16:6.19:34,6,0	1/1:19,1:17:2.68:11,3,0	1/1:27,0:22:27.41:222,27,0	1/1:14,0:11:10.43:59,10,0	./.
chr10	55090833	.	GAC	G	652.06	PASS	AB=0.990;AC=26;AF=0.565;AN=46;BaseQRankSum=1.438;DP=549;FS=23.791;HRun=0;HaplotypeScore=84.9484;InbreedingCoeff=0.0134;MQ=26.89;MQ0=116;MQRankSum=2.045;QD=1.73;ReadPosRankSum=-1.677;VQSLOD=-0.7417;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/1:12,0:11:9.76:10,0,20	./.	./.	./.	1/1:18,1:15:2.90:28,3,0	0/1:22,0:11:0:1,0,0	1/1:45,0:33:8.49:197,8,0	1/1:24,0:19:9.65:49,10,0	0/1:27,1:20:21.38:146,0,21	./.	0/1:11,0:7:0.07:0,0,0	1/1:15,0:12:6.40:34,6,0	0/0:20,0:17:0.47:0,0,1	1/1:18,0:14:5.83:33,6,0	0/0:20,0:17:9.06:0,9,48	0/1:21,0:13:49.37:49,0,84	0/1:26,0:19:0.28:0,0,24	0/1:13,0:12:22.75:23,0,65	0/1:17,0:13:8.56:9,0,23	0/0:26,0:10:3.01:0,3,52	1/1:21,0:19:2.98:21,3,0	1/1:14,0:6:0.47:1,0,0	1/1:32,0:15:6.84:43,7,0	0/0:19,1:16:1.25:0,1,3	0/1:26,0:21:23.51:117,0,24	0/1:13,1:11:16.73:17,0,47	0/0:10,0:4:0.89:0,1,2
chr10	55090835	.	CAG	C	300.47	PASS	AB=0.858;AC=12;AF=0.273;AN=44;BaseQRankSum=-0.883;DP=541;FS=2.163;HRun=0;HaplotypeScore=80.0529;InbreedingCoeff=0.2656;MQ=26.07;MQ0=123;MQRankSum=-3.666;QD=1.68;ReadPosRankSum=1.835;VQSLOD=0.9742;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:11,0:10:4.57:0,5,48	./.	./.	./.	1/1:16,3:15:2.33:9,2,0	0/1:22,1:10:0.19:0,0,0	0/0:46,0:33:56.66:0,57,378	0/0:20,2:17:2.60:0,3,10	1/1:22,5:19:12.33:199,12,0	./.	0/0:10,0:7:2.94:0,3,18	0/0:13,0:10:10.16:0,10,52	1/1:17,3:16:2.92:17,3,0	1/1:8,10:14:1.37:7,1,0	0/0:19,0:16:14.92:0,15,135	0/1:19,2:13:39.15:39,0,82	0/1:13,13:19:13.34:13,0,50	0/0:13,0:12:14.48:0,14,127	0/0:16,0:12:7.18:0,7,50	0/0:27,0:10:3.01:0,3,32	0/0:21,0:19:0:0,0,0	./.	0/0:31,0:14:2.80:0,3,13	0/0:17,1:14:0:0,0,0	0/1:22,3:20:10.72:134,0,11	0/0:14,0:11:9.97:0,10,106	0/0:11,0:4:1.82:0,2,5
chr10	55090895	.	CAGAG	C	237.74	PASS	AC=8;AF=0.167;AN=48;BaseQRankSum=1.627;DP=359;FS=4.838;HRun=0;HaplotypeScore=42.3797;InbreedingCoeff=0.6884;MQ=35.52;MQ0=127;MQRankSum=0.577;QD=6.10;ReadPosRankSum=-0.442;VQSLOD=0.9823;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:16:15.03:0,15,336	0/0:4,0:3:6.02:0,6,128	./.	./.	0/0:14,0:11:12.04:0,12,306	0/0:20,0:15:27.09:0,27,608	0/0:18,0:4:3.48:0,3,50	./.	0/0:13,0:13:18.04:0,18,381	0/0:13,0:5:12.04:0,12,283	0/0:7,0:7:9.03:0,9,196	1/1:4,0:3:3:25,3,0	1/1:8,0:5:11.92:124,12,0	0/0:17,0:14:18.06:0,18,440	0/0:23,0:18:23.63:0,24,566	0/0:15,0:10:15.05:0,15,328	0/0:19,0:13:21.02:0,21,424	0/0:25,0:19:26.56:0,27,465	0/0:8,0:6:18.05:0,18,306	0/0:4,0:3:6.01:0,6,81	0/0:22,0:7:12.04:0,12,219	1/1:6,0:3:6.02:97,6,0	./.	1/1:21,0:3:9.02:122,9,0	0/0:12,0:7:12.04:0,12,308	0/0:11,0:8:24.07:0,24,440	0/0:13,0:6:16.30:0,16,290	0/0:10,0:2:3.01:0,3,69
chr10	55091619	.	TTGTGTGTGTGTGTGTG	T	5599.64	PASS	AB=0.776;AC=26;AF=0.500;AN=52;BaseQRankSum=8.376;DP=609;FS=2.015;HRun=0;HaplotypeScore=216.6935;InbreedingCoeff=0.7220;MQ=62.95;MQ0=13;MQRankSum=-5.722;QD=17.61;ReadPosRankSum=0.056;VQSLOD=3.9759;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:31,19:48:6.02:254,6,0	0/0:12,0:11:9.03:0,9,294	./.	./.	1/1:16,5:22:14.11:298,14,0	1/1:4,10:15:21.03:782,21,0	1/1:13,13:27:11.57:431,12,0	0/0:22,0:21:32:0,32,351	1/1:6,9:15:18.02:670,18,0	1/1:15,12:26:20.27:615,20,0	1/1:9,4:13:2.94:18,3,0	0/0:14,0:20:21.07:0,21,985	0/0:16,0:16:26.27:0,26,736	1/1:7,14:21:5.81:253,6,0	1/1:9,10:19:17.86:753,18,0	0/0:10,0:10:12.04:0,12,385	0/1:22,9:31:83.47:365,0,83	0/1:10,4:13:16.42:239,0,16	0/0:17,0:17:14.07:0,14,215	0/0:13,0:17:12.01:0,12,292	0/0:40,0:38:39.13:0,39,1262	0/0:16,0:20:15.02:0,15,551	0/0:18,0:17:21.04:0,21,790	0/0:22,0:31:33.10:0,33,1460	1/1:14,12:25:12.04:503,12,0	1/1:23,1:28:18.34:292,18,0	0/0:10,0:20:18.03:0,18,463	1/1:8,1:9:3.01:126,3,0
chr10	55093839	.	T	TCA	3031.22	PASS	AB=0.827;AC=33;AF=0.611;AN=54;BaseQRankSum=-3.830;DP=620;FS=3.214;HRun=0;HaplotypeScore=102.8880;InbreedingCoeff=0.1696;MQ=65.87;MQ0=6;MQRankSum=-0.828;QD=6.41;ReadPosRankSum=0.291;VQSLOD=3.1656;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:28,14:42:22.67:203,0,23	0/0:9,0:9:5.89:0,6,56	./.	0/1:24,0:18:0:0,0,0	0/1:19,9:29:20.68:122,0,21	0/1:22,4:26:41.39:235,0,41	1/1:13,5:18:3.01:45,3,0	0/0:18,0:18:5.86:0,6,36	1/1:7,9:18:3.15:357,3,0	1/1:10,4:15:9:94,9,0	0/1:11,1:12:2.05:81,0,2	1/1:14,0:23:8.98:79,9,0	1/1:11,0:19:8.98:75,9,0	0/1:17,7:26:41.18:244,0,41	0/1:12,10:23:44.30:201,0,44	0/0:19,0:21:26.90:0,27,270	1/1:13,13:28:2.41:401,2,0	1/1:16,14:30:21.07:313,21,0	0/1:19,0:18:8.71:9,0,18	0/0:23,0:25:19.91:0,20,160	0/0:33,0:33:11.87:0,12,118	1/1:18,0:31:5.71:63,6,0	1/1:18,0:18:18.04:214,18,0	1/1:12,0:19:3:26,3,0	1/1:12,9:22:1.13:197,1,0	0/1:17,9:26:11.71:211,0,12	0/0:23,0:22:17.71:0,18,329	1/1:0,0:2:3:26,3,0
chr10	55095005	.	G	GACAC	3659.04	PASS	AB=0.808;AC=33;AF=0.635;AN=52;BaseQRankSum=-6.018;DP=599;FS=5.008;HRun=0;HaplotypeScore=140.6125;InbreedingCoeff=0.6202;MQ=62.00;MQ0=10;MQRankSum=0.740;QD=9.19;ReadPosRankSum=-2.021;VQSLOD=1.9082;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:24,11:38:12.04:282,12,0	1/1:0,0:4:8.20:37,8,0	./.	./.	1/1:10,1:18:11.24:107,11,0	1/1:19,8:27:17.53:307,18,0	1/1:24,1:31:8.33:94,8,0	1/1:28,0:27:0.47:1,0,0	1/1:7,8:16:15.05:352,15,0	1/1:15,0:16:15.05:292,15,0	1/1:11,0:11:2.74:12,3,0	0/0:15,0:22:26.50:0,26,288	0/0:17,0:24:19.38:0,19,168	1/1:16,7:26:17.56:346,18,0	1/1:13,6:21:17.53:306,18,0	0/1:18,0:25:60.45:98,0,60	0/1:16,14:36:11.54:452,0,12	1/1:10,1:15:11.26:122,11,0	0/0:6,0:7:2.95:0,3,27	0/0:7,0:14:15.72:0,16,100	0/1:34,0:38:7.30:7,0,117	0/0:9,0:11:8.99:0,9,77	0/0:9,0:14:13.83:0,14,116	0/0:21,0:39:52.30:0,52,477	1/1:8,3:13:8.77:153,9,0	1/1:14,6:22:30.02:439,30,0	0/0:10,0:16:20.39:0,20,175	1/1:7,3:10:12.04:251,12,0
chr10	55101080	.	CATAT	C	95.10	PASS	AB=1.000;AC=9;AF=0.409;AN=22;BaseQRankSum=1.013;DP=130;FS=4.012;HRun=0;HaplotypeScore=20.1193;InbreedingCoeff=0.3988;MQ=34.06;MQ0=16;MQRankSum=1.510;QD=3.66;ReadPosRankSum=-0.018;VQSLOD=0.7738;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:4,0:2:3:0,3,25	./.	./.	./.	0/0:4,0:3:1.36:0,1,3	0/0:19,0:14:21.52:0,22,284	./.	0/0:4,0:4:11.50:0,12,122	./.	./.	1/1:3,0:2:2.37:8,2,0	./.	./.	./.	1/1:6,0:6:7.91:44,8,0	0/0:8,0:2:5.98:0,6,63	./.	./.	1/1:2,0:2:0.47:1,0,0	./.	./.	0/0:7,0:4:0.47:0,0,1	./.	0/1:10,0:10:17.99:18,0,100	1/1:1,4:5:6.02:118,6,0	./.
chr10	55102065	.	GA	G	1775.93	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=9.272;DP=651;FS=2.695;HRun=9;HaplotypeScore=61.2359;InbreedingCoeff=0.9904;MQ=67.24;MQ0=5;MQRankSum=-0.122;QD=19.52;ReadPosRankSum=5.274;VQSLOD=3.9242;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,138,1552	0/0:11,0:11:33.08:0,33,370	0/0:28,2:13:29.61:0,30,326	0/0:16,0:10:10.98:0,11,168	0/0:22,0:23:56.98:0,57,618	0/0:25,0:25:69.18:0,69,777	0/0:32,3:36:62.63:0,63,921	0/0:38,0:37:96.27:0,96,1095	0/0:23,0:23:57.16:0,57,649	0/0:23,0:23:60.12:0,60,656	0/0:12,0:12:36.09:0,36,404	1/1:2,24:26:60.02:549,60,0	1/1:3,11:14:33.02:302,33,0	0/0:22,0:22:63.16:0,63,710	0/0:21,0:21:60.17:0,60,684	0/0:20,0:20:57.15:0,57,642	0/0:31,0:31:84.07:0,84,940	0/0:22,1:23:35.67:0,36,640	0/0:14,0:14:42.06:0,42,440	0/0:20,0:20:54.15:0,54,615	0/0:35,2:37:77.90:0,78,1133	1/1:1,16:17:45.02:411,45,0	1/1:1,12:14:28.14:251,28,0	1/1:0,20:20:48.03:439,48,0	0/0:20,0:20:60.12:0,60,647	0/0:27,0:27:69.20:0,69,798	0/0:25,0:24:68.99:0,69,749	0/0:12,0:12:30.09:0,30,346
chr10	55105772	.	C	CTCAT	4943.01	PASS	AB=0.620;AC=9;AF=0.161;AN=56;BaseQRankSum=-11.609;DP=717;FS=4.509;HRun=0;HaplotypeScore=115.3612;InbreedingCoeff=0.8983;MQ=76.58;MQ0=1;MQRankSum=-0.896;QD=36.61;ReadPosRankSum=1.089;VQSLOD=5.0992;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:36:68.65:0,69,992	0/0:11,0:11:24.08:0,24,390	0/0:27,0:26:34.20:0,34,465	0/0:27,0:23:33.09:0,33,493	0/0:23,0:23:48.15:0,48,754	0/0:19,0:19:45.15:0,45,729	0/0:25,0:25:51.17:0,51,799	0/0:29,0:29:47.61:0,48,652	0/0:26,0:26:54.11:0,54,779	0/0:30,0:30:69.24:0,69,1124	0/0:19,0:19:42.12:0,42,633	1/1:8,18:26:42.14:1022,42,0	0/1:12,18:30:3.83:974,0,4	0/0:30,0:30:69.23:0,69,1104	0/0:35,0:35:69.24:0,69,1120	0/0:26,0:26:54.16:0,54,826	0/0:25,0:25:57.19:0,57,930	0/0:29,0:29:60.13:0,60,898	0/0:26,0:26:30.07:0,30,420	0/0:23,0:23:60.20:0,60,972	0/0:21,0:21:45.14:0,45,707	1/1:9,13:23:35.89:806,36,0	1/1:6,14:20:33.11:803,33,0	1/1:11,23:33:11.23:1338,11,0	0/0:24,0:24:54.18:0,54,878	0/0:28,0:28:69.22:0,69,1100	0/0:19,0:19:45.15:0,45,726	0/0:23,0:23:36.12:0,36,580
chr10	55106243	.	TTCTCTC	T	2890.81	PASS	AB=0.797;AC=26;AF=0.464;AN=56;BaseQRankSum=1.327;DP=590;FS=9.139;HRun=0;HaplotypeScore=152.7502;InbreedingCoeff=0.2437;MQ=58.45;MQ0=9;MQRankSum=-4.099;QD=7.39;ReadPosRankSum=2.281;VQSLOD=2.2088;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:24,2:26:33.80:140,0,34	0/0:9,0:13:11.36:0,11,153	0/0:24,0:14:9:0,9,91	0/0:32,0:23:3.46:0,3,25	1/1:18,9:28:20.37:135,20,0	1/1:11,11:22:22.99:148,23,0	1/1:7,3:10:15.35:161,15,0	0/1:39,0:37:7.06:7,0,110	1/1:7,5:12:11.92:161,12,0	0/1:10,13:23:16.52:492,0,17	1/1:10,2:14:11.94:101,12,0	0/1:13,0:15:0.40:0,0,348	0/0:11,0:13:20.80:0,21,478	1/1:9,2:11:11.95:149,12,0	0/1:8,9:18:4.18:65,0,4	0/0:11,0:19:9.36:0,9,357	1/1:18,7:27:25.47:579,25,0	0/1:20,4:24:35.49:287,0,35	0/0:8,0:15:13.10:0,13,85	0/1:13,2:27:45.69:46,0,47	0/0:18,0:21:5.03:0,5,58	0/0:19,0:21:0.73:0,1,324	0/0:17,0:20:26.99:0,27,614	0/0:19,0:19:14.76:0,15,375	1/1:16,13:30:18.55:111,19,0	0/1:19,4:24:10.67:304,0,11	0/1:10,1:28:16.07:37,0,16	0/1:10,2:11:25.87:153,0,26
chr10	55106290	.	C	CGT	3600.11	PASS	AB=0.897;AC=32;AF=0.571;AN=56;BaseQRankSum=-1.099;DP=566;FS=0.000;HRun=0;HaplotypeScore=162.6246;InbreedingCoeff=0.4567;MQ=43.02;MQ0=9;MQRankSum=-0.968;QD=8.41;ReadPosRankSum=-1.343;VQSLOD=3.1011;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:22,2:26:2.59:106,0,3	0/0:12,0:13:32.34:0,32,313	0/0:16,0:5:11.99:0,12,127	0/0:19,0:3:9.03:0,9,108	1/1:18,6:25:9.92:137,10,0	1/1:20,12:31:28.43:386,28,0	1/1:5,13:18:5.92:85,6,0	0/0:21,0:22:14.27:0,14,48	1/1:14,6:19:25.01:290,25,0	1/1:22,3:24:2.79:397,3,0	1/1:12,2:14:4.22:24,4,0	0/1:14,0:14:12.12:12,0,14	0/0:10,0:10:8.38:0,8,68	1/1:10,14:25:15.34:166,15,0	1/1:15,4:19:15.72:203,16,0	0/0:15,0:15:31.57:0,32,325	1/1:23,6:29:12.77:402,13,0	0/1:15,5:20:5.65:350,0,6	0/0:12,0:12:3.19:0,3,25	1/1:19,0:20:1.88:7,2,0	1/1:27,0:27:10.24:140,10,0	0/1:18,0:18:12.83:13,0,45	0/0:17,0:17:18.73:0,19,141	0/0:14,0:14:16.47:0,16,61	1/1:17,6:22:12.02:165,12,0	1/1:8,19:27:43.77:536,44,0	0/1:27,0:32:35.99:78,0,36	0/1:6,4:10:21.93:104,0,22
chr10	55106305	.	G	GTA	1752.24	PASS	AB=0.973;AC=21;AF=0.375;AN=56;BaseQRankSum=0.345;DP=611;FS=0.462;HRun=0;HaplotypeScore=164.9120;InbreedingCoeff=-0.3547;MQ=42.49;MQ0=16;MQRankSum=-2.195;QD=3.85;ReadPosRankSum=3.764;VQSLOD=2.6756;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:28:37.83:38,0,97	0/0:14,0:14:30.34:0,30,436	0/0:22,0:7:15.05:0,15,202	0/0:25,0:4:12.01:0,12,160	0/1:25,0:25:24.31:46,0,24	0/1:33,0:32:31.29:139,0,31	0/1:24,0:24:27.66:28,0,46	0/1:25,0:23:36.25:182,0,36	1/1:19,0:18:1.52:126,2,0	0/1:23,0:21:90.99:157,0,91	0/0:14,0:13:3.45:0,3,23	0/1:22,0:22:69.56:127,0,70	0/0:9,0:9:8.90:0,9,105	0/1:25,0:25:15.95:45,0,16	0/1:24,0:23:42.70:79,0,43	0/0:16,0:16:35.90:0,36,483	0/1:28,0:28:99:129,0,120	0/1:22,0:22:99:124,0,162	0/1:13,0:13:24.56:25,0,75	0/1:20,0:19:11.96:12,0,51	0/1:12,22:35:2.04:224,0,2	0/0:21,0:21:5.11:0,5,71	0/0:18,0:18:11.96:0,12,169	0/0:16,0:16:4.89:0,5,40	1/1:21,0:20:9.87:76,10,0	0/1:29,0:28:44.56:166,0,45	0/1:26,2:26:19.33:160,0,19	0/1:10,0:9:29.21:29,0,81
chr10	55106309	.	A	ATG	3818.90	PASS	AB=0.866;AC=38;AF=0.679;AN=56;BaseQRankSum=-0.660;DP=604;FS=1.529;HRun=0;HaplotypeScore=154.3471;InbreedingCoeff=0.2114;MQ=43.36;MQ0=18;MQRankSum=2.030;QD=7.56;ReadPosRankSum=0.331;VQSLOD=3.4160;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:8,17:25:31.15:163,0,31	0/0:6,0:14:16.77:0,17,83	0/0:23,0:7:5.95:0,6,52	0/0:26,0:4:3.01:0,3,33	0/1:21,4:25:10.69:242,0,11	1/1:27,7:33:36.67:547,37,0	0/1:20,2:22:49.97:149,0,50	1/1:27,0:24:17.64:157,18,0	1/1:13,5:17:22.63:321,23,0	1/1:19,1:18:17.26:143,17,0	0/1:12,2:13:11.52:120,0,12	1/1:20,0:22:22.27:147,22,0	1/1:6,0:12:3:26,3,0	1/1:23,4:27:17.41:155,17,0	0/1:18,4:21:32.19:232,0,32	0/0:8,0:17:13.40:0,13,62	0/1:27,0:27:13.87:14,0,115	0/0:19,0:19:10.23:0,10,145	1/1:14,0:14:11.21:51,11,0	1/1:15,0:18:6.70:56,7,0	1/1:35,0:34:14.84:152,15,0	1/1:12,1:23:8.77:99,9,0	1/1:9,0:17:9:79,9,0	1/1:6,0:17:1.17:137,1,0	1/1:16,4:19:12.03:180,12,0	1/1:26,3:27:32.17:435,32,0	0/1:26,0:24:8.06:97,0,8	0/1:8,2:9:23.82:116,0,24
chr10	55111063	.	TACAC	T	6520.51	PASS	AB=0.773;AC=36;AF=0.692;AN=52;BaseQRankSum=-3.775;DP=565;FS=7.481;HRun=0;HaplotypeScore=128.7014;InbreedingCoeff=0.7268;MQ=58.68;MQ0=14;MQRankSum=1.801;QD=15.75;ReadPosRankSum=2.825;VQSLOD=4.2936;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:11,13:22:30.10:473,30,0	0/0:4,0:7:9.03:0,9,156	./.	./.	1/1:10,6:18:12.97:171,13,0	1/1:12,10:21:39.12:595,39,0	1/1:11,14:25:19.43:414,19,0	0/1:26,0:30:32.83:33,0,62	1/1:7,11:20:33.11:511,33,0	1/1:10,8:19:24.07:340,24,0	1/1:6,11:18:30.10:473,30,0	0/0:12,0:18:12.04:0,12,227	0/0:10,0:15:12.01:0,12,177	1/1:9,8:17:21.06:312,21,0	1/1:6,18:24:24.07:379,24,0	0/0:15,0:22:11.90:0,12,174	1/1:10,17:28:38.69:596,39,0	0/1:11,7:17:7.92:174,0,8	1/1:10,0:18:17.97:159,18,0	1/1:7,0:27:33.04:307,33,0	1/1:8,0:14:5.63:55,6,0	0/0:9,0:13:11.07:0,11,160	0/0:9,0:17:5.95:0,6,70	0/0:13,0:15:17.99:0,18,290	1/1:8,8:17:24.07:359,24,0	1/1:13,11:23:5.66:335,6,0	1/1:9,0:27:54.06:502,54,0	1/1:6,10:16:13.43:331,13,0
chr10	55111480	.	AAAT	A	2421.72	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=11.252;DP=374;FS=2.067;HRun=0;HaplotypeScore=63.7369;InbreedingCoeff=0.8460;MQ=63.61;MQ0=3;MQRankSum=1.729;QD=19.22;ReadPosRankSum=-0.593;VQSLOD=3.3417;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:91.44:0,91,1609	1/1:7,0:7:2.50:71,3,0	0/0:3,0:2:4.07:0,4,12	0/0:5,0:4:5.98:0,6,53	0/0:16,0:16:43.34:0,43,725	0/0:19,0:19:53.65:0,54,1066	0/0:9,0:9:27.01:0,27,389	1/1:3,29:30:87.01:952,87,0	0/0:8,0:8:21.07:0,21,460	0/0:5,0:5:15.05:0,15,245	0/0:15,0:15:8.84:0,9,414	0/0:7,0:7:15.05:0,15,268	0/0:8,0:8:21.05:0,21,418	0/0:3,0:3:9.02:0,9,156	0/0:3,0:3:9.03:0,9,155	1/1:24,0:24:27.75:210,28,0	0/0:37,0:37:99:0,108,2010	0/0:19,0:19:42.30:0,42,799	1/1:0,13:13:39.05:474,39,0	1/1:3,18:21:27.72:365,28,0	1/1:0,17:17:21.07:327,21,0	0/0:2,0:2:4.25:0,4,36	0/0:13,0:13:22.26:0,22,359	0/0:9,0:9:17.55:0,18,277	0/0:7,0:7:10.31:0,10,185	0/0:15,0:15:17.69:0,18,683	1/1:1,10:11:15.03:210,15,0	0/0:13,0:13:29.58:0,30,535
chr10	55111481	.	AAT	A	1452.02	PASS	AB=0.855;AC=19;AF=0.352;AN=54;BaseQRankSum=11.449;DP=372;FS=3.646;HRun=0;HaplotypeScore=59.1453;InbreedingCoeff=0.5141;MQ=63.70;MQ0=3;MQRankSum=0.946;QD=7.93;ReadPosRankSum=-1.599;VQSLOD=2.6777;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,1:32:35.89:0,36,915	1/1:7,0:7:17.41:100,17,0	0/0:3,0:2:2.04:0,2,6	0/0:4,0:3:2.04:0,2,6	0/0:16,1:17:2.86:0,3,417	0/0:18,0:18:29.47:0,29,713	0/0:10,0:10:21.01:0,21,236	1/1:30,0:30:62.48:464,62,0	0/0:7,0:7:21.07:0,21,333	0/0:5,0:5:9.03:0,9,136	0/1:14,0:14:0.59:1,0,304	0/0:6,0:6:12:0,12,151	0/0:8,0:8:21.05:0,21,309	0/0:3,0:3:9.02:0,9,120	0/0:3,0:3:6:0,6,71	1/1:25,0:25:50.09:251,50,0	0/0:37,0:37:93.13:0,93,1253	0/0:19,0:19:33.05:0,33,463	1/1:13,0:13:29.78:218,30,0	1/1:21,0:21:32.68:224,33,0	1/1:17,0:17:20.83:145,21,0	./.	0/1:10,3:13:15.19:15,0,189	0/1:7,2:9:51.33:51,0,139	0/1:5,2:7:24.13:24,0,107	0/0:15,0:15:8.64:0,9,385	1/1:12,0:11:14.73:96,15,0	0/1:11,2:13:48.32:48,0,237
chr10	55111482	.	AT	A	1271.47	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=13.138;DP=375;FS=0.453;HRun=1;HaplotypeScore=53.2490;InbreedingCoeff=0.8429;MQ=63.67;MQ0=3;MQRankSum=2.052;QD=9.78;ReadPosRankSum=-0.565;VQSLOD=0.9381;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,1:33:81.26:0,81,1036	1/1:0,4:7:17.81:121,18,0	1/1:3,0:2:3.28:9,3,0	0/0:3,0:3:5.20:0,5,32	0/0:16,0:16:36.22:0,36,483	0/0:18,0:18:51.13:0,51,674	0/0:11,0:11:29.99:0,30,309	1/1:32,0:30:65.21:407,65,0	0/0:7,0:7:21.07:0,21,285	0/0:5,0:5:15.01:0,15,159	0/0:16,0:16:17.59:0,18,381	0/0:5,0:5:15.01:0,15,167	0/0:7,0:7:21.05:0,21,268	0/0:3,0:3:9.02:0,9,105	0/0:3,0:3:9.01:0,9,106	1/1:1,18:25:58.64:389,59,0	0/0:37,0:37:99:0,108,1319	0/0:18,1:19:25.52:0,26,523	1/1:13,0:13:31.26:186,31,0	1/1:20,1:21:31.96:183,32,0	1/1:17,0:17:20.13:104,20,0	0/0:1,0:1:2.99:0,3,24	0/0:13,0:13:15.17:0,15,242	0/0:10,0:10:6.29:0,6,198	0/0:9,0:9:3.23:0,3,119	0/0:15,0:15:17.62:0,18,434	1/1:12,0:11:13.87:68,14,0	0/0:13,0:13:12.35:0,12,311
chr10	55111484	.	ATAT	A	734.98	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.307;DP=375;FS=5.259;HRun=0;HaplotypeScore=71.2824;InbreedingCoeff=0.6363;MQ=66.30;MQ0=3;MQRankSum=-3.164;QD=22.97;ReadPosRankSum=1.881;VQSLOD=3.2498;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:93.05:0,93,1986	1/1:3,4:7:0.32:198,0,0	0/0:4,0:3:5.97:0,6,47	0/0:6,0:5:9:0,9,92	0/0:16,0:16:47.90:0,48,992	0/0:18,0:18:54.16:0,54,1267	0/0:12,0:12:33.11:0,33,705	0/0:32,0:30:78.20:0,78,613	0/0:7,0:7:21.07:0,21,517	0/0:5,0:5:15.05:0,15,296	0/0:16,0:16:45.12:0,45,939	0/0:5,0:5:15.05:0,15,326	0/0:7,0:7:21.07:0,21,511	0/0:4,0:4:12.04:0,12,266	0/0:3,0:3:9.03:0,9,182	1/1:7,18:25:54.14:643,54,0	0/0:37,0:37:99:0,108,2413	0/0:19,0:19:49.41:0,49,1022	0/0:14,0:14:41.95:0,42,376	0/0:21,0:21:30.58:0,31,235	0/0:17,0:17:20.94:0,21,166	0/0:1,0:1:3.01:0,3,38	0/0:12,0:12:23.82:0,24,476	0/0:9,0:9:26.56:0,27,486	0/0:9,0:9:17.80:0,18,315	0/0:15,0:15:45.11:0,45,932	0/0:12,0:11:8.85:0,9,60	0/0:10,0:10:29.57:0,30,538
chr10	55113378	.	GA	G	3131.25	PASS	AB=0.643;AC=23;AF=0.411;AN=56;BaseQRankSum=9.038;DP=535;FS=0.374;HRun=12;HaplotypeScore=54.2046;InbreedingCoeff=0.8952;MQ=61.65;MQ0=12;MQRankSum=0.938;QD=13.61;ReadPosRankSum=0.239;VQSLOD=3.7134;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,1:27:48.74:0,49,660	1/1:2,12:14:26.89:209,27,0	0/0:12,0:7:6.24:0,6,126	0/0:12,0:7:12.02:0,12,98	0/0:11,2:13:9.68:0,10,265	0/0:15,0:16:32.90:0,33,319	0/0:25,0:25:61.93:0,62,608	1/1:9,21:30:66.80:499,67,0	0/0:15,0:15:12.90:0,13,312	0/0:28,0:29:65.96:0,66,650	0/0:14,0:15:32.86:0,33,298	1/1:5,12:17:23.89:186,24,0	1/1:6,15:21:35.68:264,36,0	0/0:12,0:13:29.89:0,30,283	0/0:19,0:19:47.94:0,48,455	1/1:3,9:12:26.87:209,27,0	0/0:27,0:26:51.10:0,51,518	0/0:28,2:30:34.49:0,34,686	0/1:8,10:18:27.69:171,0,28	1/1:0,14:15:39.71:289,40,0	1/1:3,19:21:47.81:371,48,0	1/1:4,11:15:26.88:209,27,0	1/1:4,6:10:19.97:145,20,0	1/1:5,22:26:56.30:425,56,0	0/0:13,0:16:41.90:0,42,396	0/0:23,1:24:33.85:0,34,509	1/1:7,18:25:49.84:377,50,0	0/0:9,0:8:21.04:0,21,213
chr10	55116606	.	C	CGTGTGTGTGTGTGT	7431.06	PASS	AB=1.000;AC=41;AF=0.891;AN=46;BaseQRankSum=-2.431;DP=472;FS=7.121;HRun=0;HaplotypeScore=172.5896;InbreedingCoeff=0.1716;MQ=30.43;MQ0=108;MQRankSum=-0.820;QD=19.50;ReadPosRankSum=1.570;VQSLOD=3.4922;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:23:11.79:271,12,0	./.	./.	./.	0/0:13,0:10:0:0,0,0	1/1:21,0:18:5.87:213,6,0	1/1:35,0:30:3.51:193,4,0	1/1:17,0:14:12.50:313,13,0	1/1:7,6:13:2.89:180,3,0	1/1:21,0:19:21.47:779,21,0	1/1:15,0:11:2.73:165,3,0	0/1:10,0:9:6.07:65,0,6	1/1:14,0:11:5.48:58,5,0	1/1:14,0:12:5.74:380,6,0	1/1:13,0:12:8.73:395,9,0	1/1:16,0:14:9.03:432,9,0	1/1:26,0:18:30.10:1251,30,0	1/1:15,0:10:15.05:825,15,0	1/1:17,0:12:12.17:189,12,0	./.	1/1:20,0:12:0.36:0,0,0	0/0:12,0:12:0.47:0,0,1	1/1:13,0:13:2.02:36,2,0	1/1:21,0:16:2.28:24,2,0	1/1:12,0:8:11.99:274,12,0	1/1:24,0:20:24.08:1103,24,0	./.	1/1:16,0:5:6.02:283,6,0
chr10	55116608	.	T	TGT	1539.16	PASS	AB=1.000;AC=43;AF=0.935;AN=46;DP=495;FS=0.000;HRun=0;HaplotypeScore=144.3817;InbreedingCoeff=0.1990;MQ=31.25;MQ0=108;QD=3.61;VQSLOD=1.8285;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:25:8.81:73,9,0	./.	./.	./.	0/1:14,0:11:0:0,0,0	1/1:22,0:19:5.79:51,6,0	1/1:34,0:29:3:25,3,0	1/1:17,0:14:8.50:66,9,0	1/1:15,0:14:3:26,3,0	1/1:24,0:22:18.03:123,18,0	1/1:14,0:11:2.77:21,3,0	1/1:12,0:11:4.82:35,5,0	1/1:15,0:12:5.85:62,6,0	1/1:15,0:13:6:53,6,0	1/1:14,0:13:8.99:76,9,0	1/1:15,0:13:9:80,9,0	1/1:28,0:20:29.99:283,30,0	1/1:15,0:10:15.01:144,15,0	1/1:19,0:14:11.87:78,12,0	./.	0/1:23,0:15:0:0,0,0	0/1:12,0:12:0:0,0,0	1/1:9,4:13:3.01:39,3,0	1/1:22,0:17:2.61:24,3,0	1/1:14,0:10:11.98:112,12,0	1/1:24,0:20:23.87:194,24,0	./.	1/1:16,0:5:5.99:49,6,0
chr10	55117350	.	TACACACACACACAC	T	4385.44	PASS	AB=0.672;AC=11;AF=0.204;AN=54;BaseQRankSum=4.484;DP=767;FS=2.034;HRun=0;HaplotypeScore=270.7291;InbreedingCoeff=0.6528;MQ=52.69;MQ0=7;MQRankSum=-7.496;QD=20.59;ReadPosRankSum=3.251;VQSLOD=3.7063;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:43:32.92:0,33,1672	0/1:7,0:15:23.82:289,0,24	./.	0/0:21,0:15:0:0,0,0	0/0:16,0:24:14.63:0,15,266	0/0:14,0:25:9.03:0,9,370	0/0:34,0:35:50.69:0,51,2157	0/0:22,0:21:11.25:0,11,212	0/0:18,0:32:17.25:0,17,803	0/0:20,0:32:57.12:0,57,2591	0/0:9,0:15:11.71:0,12,369	1/1:16,19:36:33.58:1281,34,0	1/1:11,27:40:50.83:1811,51,0	0/0:21,0:36:42.13:0,42,1994	0/0:21,0:39:17.29:0,17,661	1/1:9,1:33:24.08:522,24,0	0/0:11,0:30:18.06:0,18,983	0/0:20,0:20:39.13:0,39,1651	0/0:15,0:24:45.16:0,45,764	0/0:6,0:18:24.06:0,24,546	0/0:42,0:44:26.47:0,26,705	1/1:17,16:35:11.77:432,12,0	0/1:9,7:17:0:0,0,0	0/1:20,17:36:51.84:52,0,144	0/0:15,0:22:14.41:0,14,475	0/0:22,0:21:48.16:0,48,2238	0/0:13,0:26:13.69:0,14,350	0/0:7,0:6:6.02:0,6,313
chr10	55118333	.	A	AC	254.90	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-2.335;DP=505;FS=9.968;HRun=0;HaplotypeScore=62.5823;InbreedingCoeff=0.8698;MQ=61.37;MQ0=4;MQRankSum=4.167;QD=10.20;ReadPosRankSum=3.652;VQSLOD=2.8498;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:25.01:0,25,171	1/1:0,6:6:14.93:146,15,0	0/0:37,0:13:25.49:0,25,208	0/0:38,0:20:26.88:0,27,203	0/0:27,0:27:61.70:0,62,409	0/0:21,0:21:58.91:0,59,424	0/0:14,0:14:38.66:0,39,282	0/0:33,0:33:82.74:0,83,596	0/0:15,0:15:38.56:0,39,264	0/0:22,0:20:59.57:0,60,454	0/0:20,0:20:53.47:0,53,332	0/0:9,0:8:23.69:0,24,162	0/0:13,0:13:35.62:0,36,256	0/0:17,0:15:40.86:0,41,265	0/0:16,0:16:44.61:0,45,319	1/1:3,16:19:19.07:226,19,0	0/0:17,0:17:26.72:0,27,193	0/0:30,0:29:67.57:0,68,471	0/0:19,0:17:45.87:0,46,341	0/0:25,0:25:63.77:0,64,411	0/0:4,0:4:8.87:0,9,57	0/0:6,0:5:11.90:0,12,88	0/0:7,0:5:8.96:0,9,70	0/0:4,0:4:6.42:0,6,42	0/0:14,0:14:35.71:0,36,262	0/0:23,0:23:61.85:0,62,436	0/0:22,0:20:59.57:0,60,446	0/0:13,0:13:35.64:0,36,246
chr10	55119626	.	CT	C	2054.27	PASS	AB=0.935;AC=12;AF=0.214;AN=56;BaseQRankSum=11.289;DP=583;FS=2.981;HRun=10;HaplotypeScore=57.0110;InbreedingCoeff=0.7812;MQ=68.51;MQ0=0;MQRankSum=0.244;QD=15.22;ReadPosRankSum=-1.742;VQSLOD=3.5253;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:72.13:0,72,766	0/0:10,0:10:16.19:0,16,285	0/0:6,0:6:3.89:0,4,33	0/1:7,0:6:3.78:4,0,25	0/0:17,1:18:25.05:0,25,487	0/0:20,0:20:57.15:0,57,630	0/0:19,0:19:48.11:0,48,515	1/1:5,23:28:65.97:569,66,0	0/0:18,0:18:42.10:0,42,457	0/0:36,0:36:90.24:0,90,990	0/0:20,1:22:33.93:0,34,577	0/0:19,0:19:51.07:0,51,542	0/0:16,1:17:18.92:0,19,395	0/0:29,0:29:87.19:0,87,929	0/0:29,0:29:87.07:0,87,921	0/0:23,1:24:32.32:0,32,559	0/0:22,2:24:14.05:0,14,603	0/1:17,3:20:20.89:21,0,466	1/1:4,17:21:50.96:436,51,0	1/1:2,17:20:22.85:415,23,0	1/1:3,10:14:26.03:214,26,0	0/0:23,1:24:37.09:0,37,616	0/0:23,0:24:69.01:0,69,737	0/0:19,0:19:57.15:0,57,631	0/0:21,0:21:53.95:0,54,560	0/0:23,0:23:54.12:0,54,576	1/1:2,23:25:65.98:573,66,0	0/0:17,0:17:39.11:0,39,431
chr10	55122618	.	GGGGGGC	G	615.40	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=-0.428;DP=231;FS=2.178;HRun=0;HaplotypeScore=56.3832;InbreedingCoeff=0.6085;MQ=78.68;MQ0=0;MQRankSum=-3.856;QD=7.69;ReadPosRankSum=-0.906;VQSLOD=1.6343;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:8:9.50:0,9,141	0/0:4,0:4:6.02:0,6,143	0/0:10,0:8:12.01:0,12,281	0/1:12,0:12:6.72:7,0,454	0/0:2,0:2:6.02:0,6,103	0/0:7,0:7:12.04:0,12,232	0/0:20,0:20:48.61:0,49,893	1/1:9,2:11:6.91:127,7,0	0/0:11,0:11:33.11:0,33,716	0/0:3,0:3:0:0,0,0	0/0:5,0:5:8.98:0,9,167	0/0:5,0:5:11.97:0,12,190	0/0:8,0:8:15.05:0,15,332	0/0:6,0:6:15.05:0,15,330	0/0:7,0:7:18.06:0,18,435	0/0:6,0:6:15.03:0,15,362	0/0:15,0:15:35.86:0,36,680	0/0:6,0:6:15.05:0,15,348	1/1:9,0:9:17.68:127,18,0	1/1:8,0:8:2.96:43,3,0	1/1:4,16:20:2.99:62,3,0	0/0:2,0:2:0.89:0,1,2	0/0:2,0:2:3.01:0,3,87	0/0:5,0:5:12.03:0,12,221	0/0:7,0:7:9.03:0,9,183	0/0:7,0:7:8.99:0,9,176	1/1:3,17:20:20.71:398,21,0	0/0:5,0:5:9.03:0,9,167
chr10	55122623	.	GC	G	802.46	PASS	AB=0.927;AC=32;AF=0.615;AN=52;BaseQRankSum=2.405;DP=222;FS=3.407;HRun=1;HaplotypeScore=39.3474;InbreedingCoeff=-0.0128;MQ=80.04;MQ0=0;MQRankSum=-2.955;QD=4.25;ReadPosRankSum=3.396;VQSLOD=0.7928;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:10,1:11:13.95:0,14,105	0/0:2,0:2:5.59:0,6,34	0/0:10,0:8:2.30:0,2,76	0/1:11,0:11:10.20:10,0,77	1/1:3,0:3:2.51:8,3,0	1/1:6,1:7:8.41:51,8,0	0/1:22,0:22:23.34:23,0,119	1/1:9,0:9:15.11:104,15,0	0/1:12,0:12:10.03:50,0,10	./.	0/1:3,0:3:10.91:11,0,34	1/1:5,0:5:1.74:26,2,0	0/1:4,5:9:19.84:44,0,20	1/1:7,0:7:9.94:51,10,0	0/1:9,0:9:10.37:10,0,80	0/0:6,0:6:13.49:0,13,84	1/1:13,1:14:0.43:76,0,0	0/1:5,0:5:15.07:15,0,26	1/1:2,10:12:29.61:214,30,0	1/1:4,0:4:2.82:14,3,0	1/1:16,0:16:2.84:14,3,0	./.	0/0:1,1:2:2.98:0,3,22	0/1:6,0:6:29.79:30,0,34	1/1:5,0:5:8.88:60,9,0	0/1:6,1:7:22.81:23,0,40	1/1:17,0:17:20.46:111,20,0	0/1:4,2:6:14.72:15,0,26
chr10	55124161	.	GGTGTGTGTGTGT	G	1599.41	PASS	AB=0.872;AC=17;AF=0.340;AN=50;BaseQRankSum=1.262;DP=617;FS=0.000;HRun=0;HaplotypeScore=176.5374;InbreedingCoeff=0.4234;MQ=61.73;MQ0=33;MQRankSum=-0.591;QD=6.48;ReadPosRankSum=1.370;VQSLOD=2.2004;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:32:30.10:0,30,832	./.	./.	./.	0/0:15,0:15:12.02:0,12,298	0/0:17,0:16:9.03:0,9,286	0/0:35,0:32:27.07:0,27,565	0/1:30,0:32:35.87:36,0,79	0/0:13,0:13:6.02:0,6,146	0/0:21,0:17:26.86:0,27,487	0/0:9,0:8:3.01:0,3,75	1/1:8,8:16:3.01:97,3,0	1/1:6,6:12:1.74:73,2,0	0/0:11,0:10:24.08:0,24,532	0/0:16,0:19:6.21:0,6,550	0/1:9,0:14:42.16:155,0,42	0/0:35,0:34:48.12:0,48,985	0/0:18,0:21:27.06:0,27,892	1/1:16,5:19:11.64:203,12,0	0/1:12,0:12:1.94:99,0,2	0/1:44,0:41:76.60:581,0,77	1/1:8,0:7:5.97:45,6,0	0/1:9,3:12:0:0,0,0	1/1:40,0:37:8.89:131,9,0	0/0:10,0:10:3.01:0,3,120	0/0:21,0:19:27.96:0,28,664	1/1:14,13:28:10.60:337,11,0	0/0:9,0:9:6.02:0,6,111
chr10	55124194	.	GTGTGTGTGTGTGTGTGTC	G	293.63	PASS	AB=0.950;AC=9;AF=0.161;AN=56;BaseQRankSum=4.855;DP=565;FS=2.661;HRun=0;HaplotypeScore=185.5525;InbreedingCoeff=-0.0616;MQ=47.14;MQ0=56;MQRankSum=3.305;QD=1.41;ReadPosRankSum=2.252;VQSLOD=2.9182;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:35:57.04:0,57,1533	0/0:7,0:5:9:0,9,136	0/0:7,0:2:3.01:0,3,42	0/0:7,0:2:3.01:0,3,41	0/0:16,0:16:18.04:0,18,686	0/0:21,0:20:31.04:0,31,838	0/0:42,0:36:11.88:0,12,979	0/1:23,0:21:18.20:18,0,157	0/0:14,0:10:21.02:0,21,665	0/0:21,0:15:37.96:0,38,686	0/0:9,0:8:9.02:0,9,167	0/0:15,0:12:8.43:0,8,103	0/0:20,0:19:35.89:0,36,390	0/0:13,0:13:33.09:0,33,993	0/1:20,0:18:19.35:19,0,820	0/1:22,0:17:75.52:76,0,171	0/0:37,0:32:82.02:0,82,2029	0/0:22,0:18:45.05:0,45,1625	0/1:21,0:18:28.45:28,0,238	0/0:16,0:16:5.47:0,5,331	0/1:46,0:38:99:151,0,553	0/0:15,0:13:26.57:0,27,301	1/1:7,0:6:2.96:19,3,0	0/1:20,24:39:45:45,0,77	0/0:8,0:8:9.02:0,9,369	0/0:20,0:18:44.69:0,45,1282	0/1:25,0:23:72.15:72,0,340	0/0:8,0:5:12.03:0,12,354
chr10	55124677	.	A	AACACACACACACACAC	5849.56	PASS	AB=0.833;AC=50;AF=0.893;AN=56;BaseQRankSum=-2.489;DP=652;FS=9.572;HRun=0;HaplotypeScore=250.9248;InbreedingCoeff=0.2803;MQ=47.25;MQ0=20;MQRankSum=-0.123;QD=9.83;ReadPosRankSum=0.587;VQSLOD=2.3243;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:25:2.94:19,3,0	1/1:7,0:6:9.49:204,9,0	0/0:23,0:3:2.84:0,3,18	0/0:34,0:8:8.02:0,8,36	0/1:10,0:19:2.48:37,0,2	1/1:9,0:21:5.85:34,6,0	1/1:41,0:39:39.87:506,40,0	1/1:23,0:20:20.93:169,21,0	1/1:5,0:16:3.87:19,4,0	1/1:16,0:28:36.37:736,36,0	1/1:6,0:11:3.40:18,3,0	1/1:26,0:26:29.91:546,30,0	1/1:12,4:23:6.02:112,6,0	1/1:14,0:29:8.92:272,9,0	1/1:19,0:19:18.43:220,18,0	1/1:13,0:12:18.42:343,18,0	1/1:31,0:32:37.05:621,37,0	1/1:18,0:18:6.48:106,6,0	1/1:25,0:20:26.41:302,26,0	1/1:9,0:15:8.58:52,9,0	1/1:23,0:43:3.40:18,3,0	1/1:13,0:12:3.48:68,3,0	1/1:15,0:15:15.96:252,16,0	0/1:47,0:44:14.21:123,0,14	1/1:22,0:23:30.95:279,31,0	1/1:23,0:23:30.87:616,31,0	1/1:7,0:16:7.68:38,8,0	1/1:11,0:11:5.72:142,6,0
chr10	55124857	.	CA	C	4319.08	PASS	AB=0.591;AC=37;AF=0.661;AN=56;BaseQRankSum=1.903;DP=472;FS=9.860;HRun=13;HaplotypeScore=53.0032;InbreedingCoeff=0.8078;MQ=62.50;MQ0=3;MQRankSum=0.311;QD=12.34;ReadPosRankSum=2.533;VQSLOD=4.2647;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,28:34:73.52:523,74,0	0/0:6,0:6:11.97:0,12,107	0/0:24,0:7:5.83:0,6,32	0/0:17,0:9:0.77:0,1,30	1/1:5,15:20:6.44:197,6,0	1/1:3,15:18:23.83:175,24,0	1/1:2,12:14:23.86:175,24,0	1/1:5,14:19:41.65:297,42,0	0/1:4,9:12:18.08:53,0,18	1/1:4,18:22:53.62:387,54,0	1/1:3,13:17:31.85:225,32,0	0/0:11,0:13:14.86:0,15,130	0/0:14,0:16:23.74:0,24,192	1/1:6,11:17:14.52:98,15,0	1/1:2,12:14:11.93:88,12,0	0/0:15,0:15:26.99:0,27,249	1/1:4,19:23:21.54:321,22,0	1/1:5,25:30:56.66:415,57,0	1/1:5,14:18:9.50:225,9,0	1/1:2,10:12:29.82:219,30,0	1/1:6,13:19:20.80:189,21,0	0/0:12,0:12:17.24:0,17,153	0/0:7,0:7:18:0,18,162	0/0:12,0:12:36.03:0,36,339	1/1:3,16:19:35.62:262,36,0	1/1:6,11:17:6.56:211,7,0	1/1:3,10:13:17.37:131,17,0	1/1:3,7:10:17.66:131,18,0
chr10	55125836	.	A	AGAAG	2994.36	PASS	AB=0.989;AC=40;AF=0.800;AN=50;BaseQRankSum=-4.035;DP=449;FS=1.976;HRun=0;HaplotypeScore=136.0500;InbreedingCoeff=0.2582;MQ=60.59;MQ0=4;MQRankSum=-0.562;QD=8.07;ReadPosRankSum=-2.028;VQSLOD=2.5603;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:23,6:27:15.24:192,15,0	0/1:6,0:6:11.20:12,0,11	./.	./.	1/1:20,1:22:19.21:248,19,0	1/1:18,0:18:17.86:225,18,0	1/1:20,0:20:20.86:223,21,0	./.	1/1:16,1:17:27.01:393,27,0	1/1:18,7:25:23.86:285,24,0	1/1:12,1:12:8.94:98,9,0	0/0:14,0:14:11.76:0,12,72	0/1:12,0:12:21.85:22,0,23	1/1:10,0:9:16.16:205,16,0	0/1:25,2:27:6.46:213,0,6	0/1:18,0:18:37.17:37,0,65	1/1:11,11:22:12.39:280,12,0	1/1:21,0:20:23.85:178,24,0	1/1:7,0:6:2.94:18,3,0	1/1:6,0:10:1.56:17,2,0	1/1:10,0:10:5.71:22,6,0	1/1:10,0:10:3:26,3,0	0/1:7,0:13:0:0,0,0	0/1:19,0:18:1.53:2,0,53	1/1:14,0:21:9.75:59,10,0	1/1:16,0:16:31.71:307,32,0	0/0:17,0:17:8.18:0,8,59	1/1:2,1:3:3.01:70,3,0
chr10	55125909	.	GT	G	1446.64	PASS	AC=36;AF=0.900;AN=40;BaseQRankSum=-4.684;DP=92;FS=3.382;HRun=1;HaplotypeScore=19.5116;InbreedingCoeff=0.4013;MQ=87.56;MQ0=0;MQRankSum=-3.208;QD=27.30;ReadPosRankSum=0.445;VQSLOD=3.2918;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,4:3:6.02:84,6,0	1/1:0,1:1:3.01:40,3,0	0/0:11,0:6:14.90:0,15,181	0/0:11,0:7:17.74:0,18,193	./.	1/1:0,2:2:6.02:83,6,0	1/1:0,5:4:6.02:83,6,0	1/1:0,3:2:6.02:84,6,0	1/1:0,2:2:6.02:84,6,0	1/1:1,4:5:9.01:108,9,0	./.	./.	1/1:0,2:2:3.01:42,3,0	1/1:0,3:2:3.01:42,3,0	1/1:0,5:5:11.93:141,12,0	1/1:0,4:4:9.03:126,9,0	1/1:0,3:3:9.03:126,9,0	1/1:0,1:1:3.01:42,3,0	1/1:0,2:2:6.02:84,6,0	./.	./.	1/1:0,2:2:3.01:42,3,0	./.	./.	1/1:0,3:3:9.03:125,9,0	1/1:0,4:4:12.04:167,12,0	1/1:0,2:2:5.98:62,6,0	./.
chr10	55125985	.	A	AG	6787.94	PASS	AB=0.538;AC=51;AF=0.981;AN=52;BaseQRankSum=-2.146;DP=198;FS=4.510;HRun=1;HaplotypeScore=27.6655;InbreedingCoeff=-0.0339;MQ=38.85;MQ0=0;MQRankSum=0.569;QD=34.46;ReadPosRankSum=1.358;VQSLOD=4.2324;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,9:8:21:285,21,0	1/1:0,6:6:15.05:223,15,0	./.	./.	1/1:1,7:8:16.54:190,17,0	1/1:1,6:7:16.47:266,16,0	1/1:1,6:7:15.05:223,15,0	1/1:1,6:6:13.60:183,14,0	1/1:0,6:6:12.04:176,12,0	1/1:0,5:5:15.05:223,15,0	1/1:0,4:4:12.04:163,12,0	1/1:0,10:10:27.09:402,27,0	1/1:1,8:9:27.04:373,27,0	1/1:0,9:9:23.93:302,24,0	1/1:2,7:9:18.06:268,18,0	1/1:1,11:12:27.02:403,27,0	1/1:0,9:9:24:330,24,0	1/1:0,7:7:15.05:224,15,0	1/1:0,6:6:18.01:224,18,0	1/1:0,8:8:24.01:328,24,0	1/1:0,3:3:3.01:45,3,0	1/1:0,6:6:15.05:222,15,0	1/1:0,8:8:18.06:266,18,0	0/1:1,6:7:11.79:39,0,12	1/1:0,11:11:24.08:357,24,0	1/1:0,8:8:24.08:355,24,0	1/1:0,8:8:24.08:356,24,0	1/1:0,8:8:24.08:359,24,0
chr10	55126794	.	GT	G	5100.57	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-0.875;DP=416;FS=7.150;HRun=13;HaplotypeScore=76.6755;InbreedingCoeff=0.6709;MQ=65.80;MQ0=3;MQRankSum=0.268;QD=12.63;ReadPosRankSum=2.513;VQSLOD=4.9610;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,19:21:53.68:394,54,0	1/1:0,5:5:11.93:88,12,0	0/0:8,0:9:4.24:0,4,27	0/0:3,0:2:3:0,3,27	1/1:4,16:20:41.57:298,42,0	1/1:5,12:17:32.79:241,33,0	1/1:3,5:7:11.92:88,12,0	1/1:10,0:25:26.91:80,27,0	1/1:0,11:11:26.85:197,27,0	1/1:2,10:12:26.22:183,26,0	1/1:4,16:21:49.68:352,50,0	1/1:4,13:17:11.73:217,12,0	1/1:3,6:9:17.88:131,18,0	1/1:3,16:19:50.71:372,51,0	1/1:2,11:13:26.82:197,27,0	1/1:2,9:11:20.88:153,21,0	1/1:6,21:26:53.63:394,54,0	1/1:3,21:24:47.61:350,48,0	1/1:5,0:16:20.35:59,20,0	1/1:5,0:14:17.88:51,18,0	1/1:2,0:13:14.35:41,14,0	1/1:1,2:3:5.97:44,6,0	1/1:6,8:14:20.84:153,21,0	1/1:3,4:7:8.92:66,9,0	1/1:5,16:21:29.81:219,30,0	1/1:4,21:27:37.53:419,38,0	1/1:1,0:13:18.33:53,18,0	1/1:2,12:14:35.79:263,36,0
chr10	55127266	.	C	CAAAAACAA	1843.99	PASS	AB=0.596;AC=3;AF=0.054;AN=56;BaseQRankSum=-4.213;DP=630;FS=6.206;HRun=0;HaplotypeScore=155.5122;InbreedingCoeff=0.6162;MQ=68.74;MQ0=2;MQRankSum=-6.475;QD=48.53;ReadPosRankSum=-0.210;VQSLOD=2.7040;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:50.71:0,51,1756	1/1:2,6:10:18.02:637,18,0	0/0:21,0:17:18.07:0,18,230	0/0:23,0:18:17.46:0,17,228	0/0:27,0:27:57.19:0,57,1239	0/0:17,0:17:36.12:0,36,841	0/0:12,0:12:24.05:0,24,549	0/0:27,0:27:41.27:0,41,693	0/0:20,0:20:33.09:0,33,773	0/0:24,0:24:57.17:0,57,1170	0/0:23,0:22:56.80:0,57,1350	0/0:24,0:24:45.11:0,45,791	0/0:22,0:22:45.08:0,45,821	0/0:26,0:26:54.11:0,54,1049	0/0:24,0:24:54.36:0,54,1386	0/1:9,18:28:39.18:1310,0,39	0/0:39,0:39:90.13:0,90,1748	0/0:35,0:35:75.21:0,75,1757	0/0:16,0:16:15.03:0,15,289	0/0:34,0:34:57.16:0,57,1305	0/0:13,0:13:36.10:0,36,803	0/0:23,0:23:60.15:0,60,1236	0/0:22,0:22:50.97:0,51,991	0/0:13,0:13:35.97:0,36,644	0/0:13,0:13:33.09:0,33,729	0/0:17,0:17:39.12:0,39,892	0/0:33,0:33:78.15:0,78,1541	0/0:6,0:6:14.33:0,14,338
chr10	55127801	.	AGGAT	A	9673.11	PASS	AB=0.852;AC=47;AF=0.839;AN=56;BaseQRankSum=7.592;DP=813;FS=2.431;HRun=0;HaplotypeScore=134.2708;InbreedingCoeff=0.6167;MQ=62.54;MQ0=18;MQRankSum=1.030;QD=14.14;ReadPosRankSum=1.874;VQSLOD=4.5868;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:24,20:45:35.21:560,35,0	0/0:9,0:9:18.06:0,18,401	0/0:40,0:24:0.89:0,1,2	0/0:36,0:27:0.89:0,1,2	1/1:14,14:28:30.10:434,30,0	0/1:19,4:23:12.79:302,0,13	1/1:18,9:27:6.02:94,6,0	1/1:31,0:28:3.01:40,3,0	1/1:11,0:30:24.97:223,25,0	1/1:16,19:35:54.13:786,54,0	1/1:8,8:16:24.08:375,24,0	1/1:15,19:35:45.62:703,46,0	1/1:8,22:30:21.07:317,21,0	1/1:15,17:32:24.08:375,24,0	1/1:19,5:24:39.11:563,39,0	0/0:43,0:44:4.98:0,5,1682	1/1:14,13:27:24.08:374,24,0	1/1:13,5:18:27.09:419,27,0	1/1:13,5:16:15.05:223,15,0	1/1:18,17:35:41.61:603,42,0	1/1:20,17:36:15.05:234,15,0	1/1:18,11:28:18.06:249,18,0	1/1:11,15:25:21.40:328,21,0	1/1:17,15:31:30.10:468,30,0	1/1:7,16:23:27.09:421,27,0	1/1:19,15:33:48.16:741,48,0	1/1:13,18:30:35.85:562,36,0	1/1:5,12:17:18.06:281,18,0
chr10	55129085	.	TCA	T	8965.28	PASS	AB=0.686;AC=19;AF=0.339;AN=56;BaseQRankSum=17.106;DP=1082;FS=1.603;HRun=0;HaplotypeScore=163.0873;InbreedingCoeff=0.9162;MQ=54.59;MQ0=22;MQRankSum=-0.144;QD=20.06;ReadPosRankSum=4.591;VQSLOD=5.3556;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:55,1:56:99:0,112,2358	0/0:14,0:14:30.10:0,30,497	0/0:11,0:3:3.01:0,3,45	0/0:25,0:8:8.99:0,9,102	0/0:21,0:21:60.17:0,60,925	0/0:31,1:32:46.07:0,46,1249	0/0:37,1:38:39.80:0,40,1153	1/1:25,23:36:65.60:787,66,0	0/0:46,0:45:99:0,106,1782	0/0:50,0:49:99:0,114,1839	0/0:27,0:27:72.23:0,72,1166	1/1:3,40:42:84.27:1069,84,0	1/1:4,45:49:90.16:1143,90,0	0/0:42,0:42:70.73:0,71,1569	0/0:54,0:54:99:0,147,2402	0/0:37,0:37:96.30:0,96,1548	0/0:44,2:46:37.67:0,38,1623	0/0:42,0:42:92.11:0,92,1492	0/1:13,11:18:2.25:379,0,2	1/1:10,20:30:54.08:680,54,0	1/1:34,66:95:77.19:1026,77,0	1/1:3,35:37:83.96:1069,84,0	1/1:3,28:31:54.17:687,54,0	1/1:7,49:54:99:1291,102,0	0/0:25,0:25:63.19:0,63,980	0/0:50,0:48:99:0,126,2013	1/1:9,19:28:65.44:834,65,0	0/0:18,0:18:48.16:0,48,799
chr10	55129131	.	A	ACACACACT	4013.86	PASS	AC=10;AF=0.185;AN=54;BaseQRankSum=1.935;DP=1170;FS=1.032;HRun=0;HaplotypeScore=323.3801;InbreedingCoeff=0.9638;MQ=54.00;MQ0=24;MQRankSum=-8.798;QD=15.03;ReadPosRankSum=-6.044;VQSLOD=1.1670;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:65,0:65:99:0,129,2747	0/0:15,0:15:30.09:0,30,719	0/0:16,0:3:6.02:0,6,153	./.	0/0:19,0:18:36.12:0,36,885	0/0:26,0:26:51.16:0,51,1187	0/0:48,0:47:92.71:0,93,2026	1/1:69,0:58:89.82:1743,90,0	0/0:46,0:45:90.16:0,90,2086	0/0:42,0:41:93.31:0,93,2229	0/0:27,0:27:54.18:0,54,1261	0/0:43,0:43:84.24:0,84,1800	0/0:42,0:42:65.93:0,66,1526	0/0:51,0:51:99:0,100,2173	0/0:59,0:59:99:0,129,2879	0/0:44,0:44:78.23:0,78,1882	0/0:50,0:50:98.39:0,98,2161	0/0:43,0:43:65.43:0,65,2020	1/1:16,10:20:34:1054,34,0	1/1:15,19:38:10.16:66,10,0	1/1:99,3:97:36.08:444,36,0	0/0:44,0:44:78.05:0,78,1684	0/0:31,0:30:54.18:0,54,1250	0/0:75,0:73:99:0,120,2603	0/0:31,0:31:69.24:0,69,1736	0/0:49,0:48:84.27:0,84,1904	1/1:15,12:31:21.07:707,21,0	0/0:20,0:20:51.17:0,51,1162
chr10	55129271	.	TCA	T	158.09	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=9.247;DP=1146;FS=3.257;HRun=0;HaplotypeScore=166.1757;InbreedingCoeff=0.6467;MQ=56.97;MQ0=10;MQRankSum=0.022;QD=2.77;ReadPosRankSum=1.170;VQSLOD=2.9004;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,102,1730	1/1:18,0:18:27.25:112,27,0	0/0:49,0:23:44.83:0,45,648	0/0:51,0:23:62.93:0,63,951	0/0:32,0:32:84.26:0,84,1381	0/0:25,0:25:69.21:0,69,1140	0/0:34,1:34:93.29:0,93,1520	0/0:49,0:45:99:0,117,1943	0/0:40,0:40:99:0,114,1853	0/0:47,0:47:99:0,129,2121	0/0:23,0:23:54.18:0,54,914	0/0:59,0:59:99:0,162,2583	0/0:54,0:54:99:0,139,2217	0/0:47,0:47:99:0,120,2016	0/0:57,0:57:99:0,156,2484	0/1:39,0:37:44.26:152,0,44	0/0:35,0:35:90.29:0,90,1512	0/0:32,1:33:71.75:0,72,1106	0/0:17,0:15:42.14:0,42,694	0/0:28,0:28:75.26:0,75,1271	0/0:122,2:122:99:0,295,4685	0/0:38,1:39:65.93:0,66,1662	0/0:35,0:35:99:0,105,1730	0/0:57,0:57:99:0,162,2650	0/0:25,0:25:69.21:0,69,1127	0/0:42,0:42:99:0,123,2045	0/0:27,0:26:66.22:0,66,1103	0/0:10,0:10:30.10:0,30,514
chr10	55129278	.	CACAT	C	1567.41	PASS	AB=0.520;AC=3;AF=0.054;AN=56;BaseQRankSum=6.667;DP=1151;FS=7.222;HRun=0;HaplotypeScore=200.4851;InbreedingCoeff=0.6624;MQ=56.66;MQ0=27;MQRankSum=-1.564;QD=28.50;ReadPosRankSum=0.533;VQSLOD=2.9557;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:95.40:0,95,2745	1/1:1,15:16:30.57:569,31,0	0/0:48,0:18:34.39:0,34,958	0/0:58,0:22:44.90:0,45,1391	0/0:29,1:30:81.28:0,81,2118	0/0:29,0:29:78.20:0,78,1805	0/0:37,0:36:96.26:0,96,2266	0/0:48,0:43:99:0,120,2899	0/0:43,0:43:99:0,117,2845	0/0:51,0:50:99:0,138,3286	0/0:21,0:21:63.16:0,63,1537	0/0:58,0:58:99:0,162,3955	0/0:52,0:52:99:0,144,3505	0/0:44,0:44:99:0,129,3127	0/0:58,0:58:99:0,168,4001	0/1:3,36:38:14.64:1104,0,15	0/0:31,0:31:90.31:0,90,2351	0/0:30,0:30:39.93:0,40,1624	0/0:20,0:15:41.91:0,42,1105	0/0:27,0:27:78.23:0,78,1975	0/0:119,0:118:99:0,286,7231	0/0:44,0:44:99:0,123,2810	0/0:37,0:37:99:0,111,2720	0/0:57,0:57:99:0,166,4100	0/0:25,0:25:69.24:0,69,1790	0/0:44,0:44:99:0,129,3127	0/0:29,0:28:78.13:0,78,1861	0/0:11,0:11:33.11:0,33,852
chr10	55129992	.	C	CTTA	5753.98	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=3.027;DP=558;FS=6.122;HRun=0;HaplotypeScore=78.5918;InbreedingCoeff=0.9958;MQ=95.17;MQ0=0;MQRankSum=-4.726;QD=52.31;ReadPosRankSum=-0.941;VQSLOD=6.3050;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:87.25:0,87,1326	0/0:5,0:5:15.05:0,15,241	0/0:24,0:24:56.52:0,57,781	0/0:29,0:29:64.99:0,65,978	0/0:31,0:31:78.27:0,78,1241	0/0:22,0:22:54.14:0,54,819	0/0:22,0:22:54.18:0,54,846	1/1:4,19:24:63.19:1307,63,0	0/0:21,0:21:63.21:0,63,1012	0/0:14,0:14:39.13:0,39,627	0/0:22,0:22:60.20:0,60,959	0/0:9,0:9:27.09:0,27,434	0/0:12,0:12:36.12:0,36,578	0/0:11,0:11:33.11:0,33,530	0/0:29,0:29:81.28:0,81,1302	0/0:11,0:11:33.11:0,33,530	0/0:26,0:26:78.24:0,78,1204	0/0:16,0:15:42.12:0,42,637	1/1:4,19:23:60.21:1323,60,0	1/1:4,18:22:51.17:1093,51,0	1/1:4,22:27:63.21:1332,63,0	0/0:19,0:19:57.19:0,57,910	0/0:19,0:19:57.19:0,57,916	0/0:22,0:22:57.19:0,57,911	0/0:19,0:19:57.17:0,57,867	0/0:18,0:18:54.17:0,54,844	1/1:2,11:14:33.11:699,33,0	0/0:15,0:15:42.09:0,42,623
chr10	55130853	.	G	GT	2661.18	PASS	AB=0.812;AC=15;AF=0.268;AN=56;BaseQRankSum=-8.536;DP=621;FS=2.356;HRun=10;HaplotypeScore=72.7108;InbreedingCoeff=0.7334;MQ=81.74;MQ0=4;MQRankSum=-0.067;QD=12.49;ReadPosRankSum=-3.115;VQSLOD=2.9566;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:28:74.98:0,75,581	0/1:1,10:11:3.11:171,0,3	0/1:33,1:23:15.86:16,0,134	0/1:30,0:26:30.62:31,0,83	0/0:29,1:32:80.93:0,81,664	0/0:32,0:34:88.55:0,89,695	0/0:12,0:11:23.97:0,24,197	1/1:11,23:34:25.69:590,26,0	0/0:30,0:30:86.34:0,86,691	0/0:11,0:11:23.95:0,24,195	0/0:23,0:23:62.90:0,63,513	0/0:17,0:19:27.86:0,28,356	0/0:16,0:17:46.95:0,47,372	0/0:23,0:23:62.91:0,63,517	0/0:13,0:13:35.96:0,36,296	1/1:4,9:13:21.85:252,22,0	0/0:22,0:22:56.88:0,57,461	0/0:11,0:12:25.98:0,26,203	1/1:6,9:16:4.45:272,4,0	1/1:7,15:24:29.20:484,29,0	1/1:1,18:19:48.12:512,48,0	0/0:23,0:23:56.86:0,57,459	0/0:19,0:19:50.91:0,51,415	0/0:20,0:20:50.92:0,51,416	0/0:28,0:28:77.89:0,78,637	0/0:26,1:28:47.90:0,48,582	1/1:7,22:30:50.69:522,51,0	0/0:14,0:14:32.96:0,33,271
chr10	55131511	.	TTCTCTCTCTCTCTCTCTCTCTCTCTCTC	T	10817.14	PASS	AB=0.886;AC=26;AF=0.464;AN=56;BaseQRankSum=10.033;DP=567;FS=2.049;HRun=0;HaplotypeScore=352.6850;InbreedingCoeff=0.8106;MQ=66.32;MQ0=11;MQRankSum=-7.604;QD=44.70;ReadPosRankSum=4.612;VQSLOD=2.5312;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:21,8:29:9.03:624,9,0	0/0:8,0:10:15.52:0,16,1229	0/0:23,0:16:12.04:0,12,286	0/0:31,0:22:15.32:0,15,754	1/1:14,10:25:24.08:1548,24,0	1/1:6,5:11:15.05:1083,15,0	1/1:15,4:19:6.02:433,6,0	0/0:26,0:25:20.10:0,20,1062	1/1:9,6:15:15.05:1083,15,0	1/1:10,4:14:9.01:284,9,0	1/1:7,3:8:6.02:433,6,0	0/0:14,0:13:21.04:0,21,1075	0/0:21,0:21:42.62:0,43,2734	1/1:5,2:11:18.05:1045,18,0	1/1:22,4:26:9.03:650,9,0	0/0:15,0:18:22.01:0,22,1818	0/1:12,0:12:0:0,0,0	0/1:12,5:17:78.50:424,0,79	0/0:20,0:20:36.08:0,36,2067	0/0:23,0:23:15.03:0,15,1092	0/0:27,0:34:57.17:0,57,4044	0/0:20,0:19:20.90:0,21,1411	0/0:24,0:24:21.53:0,22,1543	0/0:26,0:25:27.38:0,27,1997	1/1:6,8:16:24.08:1691,24,0	1/1:8,3:12:5.45:651,5,0	0/0:31,0:35:54.66:0,55,5913	1/1:13,12:23:12.04:867,12,0
chr10	55131787	.	C	CAAAA	5044.70	PASS	AB=0.711;AC=37;AF=0.661;AN=56;BaseQRankSum=-0.690;DP=442;FS=4.254;HRun=13;HaplotypeScore=80.0022;InbreedingCoeff=0.6223;MQ=78.06;MQ0=0;MQRankSum=-3.969;QD=16.43;ReadPosRankSum=-1.768;VQSLOD=2.3653;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,0:16:11.95:128,12,0	1/1:2,0:11:21.89:162,22,0	0/0:20,0:18:2.74:0,3,12	0/0:10,0:8:2.88:0,3,24	1/1:14,9:31:41.30:660,41,0	1/1:3,10:16:24.08:483,24,0	1/1:6,5:14:16.82:232,17,0	0/0:27,0:30:59.73:0,60,715	1/1:9,0:9:13.06:168,13,0	1/1:6,8:15:24.03:372,24,0	1/1:2,1:12:29.15:389,29,0	0/1:2,0:12:3.71:19,0,4	0/0:4,0:13:3.58:0,4,9	1/1:4,0:13:3.01:37,3,0	1/1:5,7:15:12.04:256,12,0	1/1:2,0:14:26.32:153,26,0	1/1:8,14:24:24.08:521,24,0	1/1:7,3:11:6.02:134,6,0	0/0:13,0:15:37.21:0,37,428	0/1:17,0:18:8.69:9,0,294	0/0:15,0:17:39.94:0,40,469	0/0:2,0:10:10.37:0,10,56	0/1:3,0:10:8.61:9,0,36	1/1:6,0:15:1.88:48,2,0	1/1:0,12:14:15.05:273,15,0	1/1:6,8:19:42.09:555,42,0	0/0:18,0:19:12.72:0,13,345	1/1:9,6:18:21.54:438,22,0
chr10	55131938	.	G	GAA	4132.02	PASS	AB=1.000;AC=34;AF=0.607;AN=56;BaseQRankSum=0.328;DP=583;FS=7.105;HRun=13;HaplotypeScore=98.4017;InbreedingCoeff=0.7178;MQ=75.20;MQ0=2;MQRankSum=0.370;QD=10.82;ReadPosRankSum=-2.226;VQSLOD=1.9436;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:13,23:36:33.01:396,33,0	1/1:0,1:9:11.38:68,11,0	0/0:18,0:18:1.59:0,2,106	0/1:18,0:15:36.23:36,0,57	1/1:11,14:29:47.18:398,47,0	1/1:5,17:22:8.99:101,9,0	1/1:4,13:18:18.05:232,18,0	0/1:23,0:24:4.47:4,0,284	1/1:1,14:16:8.65:122,9,0	1/1:12,12:27:36.98:354,37,0	1/1:3,9:15:20.82:162,21,0	0/0:28,0:31:44.62:0,45,453	0/0:15,0:17:35.37:0,35,282	1/1:3,7:10:12.04:161,12,0	1/1:5,13:21:14.79:289,15,0	1/1:10,2:32:29.98:297,30,0	1/1:10,20:32:12.65:542,13,0	1/1:5,8:16:14.53:159,15,0	0/0:16,0:20:17.17:0,17,232	0/0:13,0:17:31.87:0,32,231	0/0:14,0:18:0.86:0,1,183	0/0:14,0:18:4.03:0,4,201	0/0:16,0:18:8.45:0,8,94	0/0:18,0:21:41.38:0,41,339	1/1:7,14:21:24.08:326,24,0	1/1:4,16:22:45.65:433,46,0	0/0:20,0:21:40.26:0,40,321	1/1:5,7:13:5.51:50,6,0
chr10	55132273	.	CGCCTCTTGGCTT	C	2723.22	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=8.014;DP=401;FS=0.000;HRun=0;HaplotypeScore=136.9072;InbreedingCoeff=0.9216;MQ=86.73;MQ0=0;MQRankSum=-7.453;QD=85.10;ReadPosRankSum=-0.822;VQSLOD=3.4231;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:90.31:0,90,5352	0/0:12,0:12:36.12:0,36,1778	0/0:10,0:11:33.10:0,33,1325	0/0:18,0:18:51.07:0,51,2345	0/0:11,0:11:33.11:0,33,1999	0/0:13,0:13:39.13:0,39,2301	0/0:23,0:23:69.24:0,69,4259	1/1:0,11:11:33.10:1132,33,0	0/0:14,0:14:42.14:0,42,2509	0/0:13,0:13:39.13:0,39,2289	0/0:1,0:1:3.01:0,3,191	0/0:20,0:20:60.19:0,60,3506	0/0:14,0:14:42.14:0,42,2533	0/0:18,0:18:54.17:0,54,3170	0/0:14,0:14:42.14:0,42,2516	0/0:13,0:13:39.13:0,39,2373	0/0:44,0:44:99:0,132,7819	0/0:20,0:20:60.21:0,60,3589	1/1:0,4:4:12.04:475,12,0	1/1:1,3:4:9.03:291,9,0	1/1:0,9:9:18.53:634,19,0	0/0:12,0:12:36.12:0,36,2083	0/0:9,0:9:21.07:0,21,1235	0/0:25,0:25:75.26:0,75,4667	0/0:11,0:11:33.11:0,33,2063	0/0:15,0:15:45.15:0,45,2815	1/1:0,4:4:9.03:356,9,0	0/0:8,0:8:21.07:0,21,1178
chr10	55140840	.	GTA	G	265.83	PASS	AB=0.766;AC=2;AF=0.036;AN=56;BaseQRankSum=10.025;DP=950;FS=18.280;HRun=0;HaplotypeScore=193.6060;InbreedingCoeff=-0.0427;MQ=51.89;MQ0=20;MQRankSum=-8.729;QD=3.74;ReadPosRankSum=-3.572;VQSLOD=1.0037;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,129,2341	0/0:9,0:9:27.02:0,27,480	0/0:33,0:5:7.15:0,7,127	0/0:40,0:9:23.55:0,24,244	0/0:27,0:27:72.18:0,72,1340	0/0:28,0:28:71.72:0,72,1273	0/0:52,0:52:99:0,132,2259	0/0:53,0:42:2.24:0,2,1173	0/0:41,0:40:88.29:0,88,1822	0/0:37,0:36:99:0,108,1871	0/0:18,0:18:51.14:0,51,906	0/0:33,0:33:87.18:0,87,1409	0/0:24,0:24:72.04:0,72,1042	0/0:46,0:46:99:0,126,2200	0/0:37,0:37:93.23:0,93,1622	0/0:45,0:45:99:0,111,1903	0/0:43,0:43:99:0,113,1906	0/0:25,0:25:47.14:0,47,1149	0/0:31,0:26:48.90:0,49,841	0/1:20,8:28:4.58:5,0,657	0/0:48,1:45:21.38:0,21,894	0/0:22,0:22:63.15:0,63,1074	0/0:22,0:22:63.16:0,63,1084	0/0:55,1:56:99:0,130,2674	0/0:19,0:19:54.14:0,54,931	0/0:26,0:26:78.23:0,78,1373	0/1:29,14:43:99:340,0,1044	0/0:13,0:13:39.13:0,39,727
chr10	55140859	.	A	AGT	1096.62	PASS	AB=0.839;AC=5;AF=0.089;AN=56;BaseQRankSum=10.807;DP=935;FS=0.574;HRun=0;HaplotypeScore=185.3952;InbreedingCoeff=-0.0989;MQ=57.61;MQ0=18;MQRankSum=-8.113;QD=6.45;ReadPosRankSum=-0.967;VQSLOD=3.0051;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,131,1992	0/0:8,0:8:21.07:0,21,320	0/0:43,0:19:33.33:0,33,595	0/0:47,0:17:9.80:0,10,220	0/0:26,0:26:75.25:0,75,1132	0/0:25,0:25:66.18:0,66,975	0/0:46,0:46:99:0,112,1683	0/1:40,7:36:99:221,0,625	0/0:44,0:45:99:0,122,1764	0/0:38,0:37:99:0,111,1605	0/0:19,0:19:54.18:0,54,821	0/0:32,0:32:93.26:0,93,1351	0/0:25,0:25:72.22:0,72,1072	0/0:47,0:47:99:0,127,1852	0/0:35,0:35:99:0,99,1499	0/0:44,0:44:99:0,108,1677	0/0:48,0:48:99:0,99,1620	0/0:26,0:26:70.07:0,70,964	0/1:12,1:11:12.22:12,0,311	0/1:17,15:32:99:370,0,192	0/1:37,2:36:22.83:23,0,313	0/0:24,0:24:69.23:0,69,1042	0/0:25,0:25:72.23:0,72,1071	0/0:45,0:45:99:0,123,1795	0/0:18,0:18:51.17:0,51,775	0/0:28,0:27:77.91:0,78,1153	0/1:27,12:39:99:587,0,280	0/0:17,0:17:51.17:0,51,770
chr10	55140861	.	AGT	A	936.95	PASS	AB=0.835;AC=6;AF=0.107;AN=56;BaseQRankSum=9.822;DP=947;FS=35.370;HRun=0;HaplotypeScore=185.6407;InbreedingCoeff=-0.0072;MQ=57.82;MQ0=18;MQRankSum=-7.517;QD=4.07;ReadPosRankSum=-2.966;VQSLOD=1.2873;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,126,2030	0/0:8,0:8:24.07:0,24,382	0/0:45,0:21:50.93:0,51,776	0/1:48,0:18:16.22:16,0,258	0/0:25,0:25:72.23:0,72,1152	0/0:26,0:26:63.17:0,63,1010	0/0:45,0:45:99:0,102,1598	0/1:40,10:39:99:275,0,150	0/0:45,0:45:99:0,104,1833	0/0:39,0:38:99:0,102,1705	0/0:19,0:19:54.16:0,54,859	0/0:30,0:30:84.28:0,84,1371	0/0:25,0:25:72.22:0,72,1142	0/0:44,0:44:99:0,114,1916	0/0:36,0:36:99:0,102,1659	0/0:43,0:43:99:0,103,1656	0/0:51,0:51:99:0,114,1728	0/0:26,0:26:63.60:0,64,976	0/1:10,5:13:35.43:184,0,35	0/1:22,10:32:99:216,0,141	0/1:35,5:37:2.96:116,0,3	0/0:25,0:25:60.17:0,60,954	0/0:24,0:24:66.23:0,66,1095	0/0:43,0:43:99:0,117,1872	0/0:19,0:19:54.17:0,54,875	0/0:29,0:28:78.25:0,78,1270	0/1:32,13:44:99:254,0,208	0/0:19,0:19:56.82:0,57,864
chr10	55140952	.	TTGTGTGTGTG	T	5467.23	PASS	AB=0.807;AC=30;AF=0.577;AN=52;BaseQRankSum=6.900;DP=876;FS=31.998;HRun=0;HaplotypeScore=273.0009;InbreedingCoeff=0.3077;MQ=50.46;MQ0=12;MQRankSum=-8.636;QD=9.94;ReadPosRankSum=-0.422;VQSLOD=2.6300;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:23,14:37:33.31:102,0,33	0/1:5,0:9:15.14:15,0,32	0/0:43,0:17:2.98:0,3,21	./.	0/1:15,9:24:13.81:147,0,14	1/1:21,8:30:25.78:632,26,0	1/1:22,19:42:24.08:602,24,0	0/1:44,0:39:7.13:7,0,43	1/1:13,17:31:27.09:648,27,0	1/1:21,7:28:10.44:221,10,0	1/1:9,9:18:20.96:386,21,0	0/0:29,0:29:34.40:0,34,1436	0/0:18,0:18:21.96:0,22,749	1/1:26,10:35:11.16:362,11,0	1/1:7,0:32:27.09:618,27,0	1/1:29,1:43:27.25:400,27,0	0/1:34,1:35:35.36:62,0,35	1/1:22,1:23:14.84:294,15,0	./.	0/1:21,0:23:67.15:144,0,67	0/0:62,0:61:5.44:0,5,86	0/0:32,0:32:36.59:0,37,1444	0/0:21,0:21:35.97:0,36,1395	0/0:47,0:47:60:0,60,2533	1/1:11,0:22:5.22:125,5,0	1/1:17,7:23:16.17:329,16,0	0/1:14,0:28:99:191,0,164	0/1:12,2:16:62.50:183,0,63
chr10	55142093	.	GC	G	5560.47	PASS	AB=0.600;AC=41;AF=0.732;AN=56;BaseQRankSum=1.476;DP=496;FS=2.967;HRun=10;HaplotypeScore=69.4103;InbreedingCoeff=0.8505;MQ=78.34;MQ0=2;MQRankSum=-3.326;QD=14.91;ReadPosRankSum=2.559;VQSLOD=5.4103;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,29:28:71.98:625,72,0	1/1:0,4:4:12:104,12,0	0/0:22,0:20:23.15:0,23,221	0/0:18,0:17:16.31:0,16,135	1/1:4,17:21:47.98:417,48,0	1/1:4,12:12:26.99:234,27,0	1/1:3,13:12:26.99:234,27,0	1/1:5,0:24:38.70:113,39,0	1/1:3,13:12:32.98:286,33,0	1/1:4,17:21:56.02:472,56,0	1/1:2,13:15:41.99:364,42,0	0/0:23,1:21:48.13:0,48,531	0/0:15,1:13:30.04:0,30,318	1/1:1,14:14:38.99:338,39,0	1/1:1,15:12:32.99:286,33,0	1/1:1,17:13:35.99:312,36,0	1/1:2,16:14:35.99:312,36,0	1/1:5,18:20:44.98:391,45,0	1/1:6,0:14:18.33:54,18,0	1/1:0,0:7:12.22:36,12,0	1/1:2,0:21:36.67:107,37,0	0/0:9,0:9:21.04:0,21,223	0/0:10,1:11:0.75:0,1,239	0/0:20,0:19:47.90:0,48,483	1/1:0,12:12:32.99:286,33,0	1/1:5,16:19:44.98:391,45,0	1/1:3,0:21:36.67:108,37,0	0/1:2,4:6:18.18:89,0,18
chr10	55142170	.	AG	A	3887.74	PASS	AC=48;AF=0.960;AN=50;BaseQRankSum=-1.732;DP=264;FS=5.421;HRun=3;HaplotypeScore=26.9827;InbreedingCoeff=0.2935;MQ=37.56;MQ0=5;MQRankSum=-1.732;QD=16.00;ReadPosRankSum=0.321;VQSLOD=2.8246;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,19:15:31.34:374,31,0	1/1:0,2:1:3.01:37,3,0	./.	0/0:2,0:1:2.99:0,3,23	1/1:1,15:4:12.04:147,12,0	1/1:0,8:2:6.02:74,6,0	1/1:1,8:2:6.02:74,6,0	./.	1/1:0,9:3:9.03:112,9,0	1/1:0,10:3:9.03:111,9,0	./.	1/1:0,12:7:18.06:223,18,0	1/1:0,11:4:12.04:149,12,0	1/1:1,5:4:9.03:111,9,0	1/1:1,13:8:18.06:222,18,0	1/1:0,6:3:9.02:100,9,0	1/1:1,6:3:6:61,6,0	1/1:0,7:6:18.06:223,18,0	1/1:2,5:3:6.02:74,6,0	1/1:0,12:2:6.02:74,6,0	1/1:3,6:8:12.04:149,12,0	1/1:0,7:4:12.04:149,12,0	1/1:1,8:7:15.05:186,15,0	1/1:1,11:10:24.07:297,24,0	1/1:2,10:7:18.05:211,18,0	1/1:0,10:6:18.06:223,18,0	1/1:0,11:9:27.08:333,27,0	1/1:1,15:6:15.03:173,15,0
chr10	55142545	.	AT	A	847.82	PASS	AC=40;AF=1.000;AN=40;DP=88;FS=0.000;HRun=1;HaplotypeScore=7.2112;InbreedingCoeff=-0.1266;MQ=41.68;MQ0=6;QD=10.47;VQSLOD=1.3834;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,4:4:2.97:20,3,0	1/1:0,1:1:3.01:38,3,0	./.	./.	1/1:0,5:5:5.94:41,6,0	./.	1/1:3,0:1:3:27,3,0	1/1:4,0:2:5.96:43,6,0	1/1:7,0:4:11.97:100,12,0	1/1:2,0:1:3.01:30,3,0	1/1:7,0:1:2.97:20,3,0	1/1:0,5:5:3.01:38,3,0	./.	1/1:2,0:1:3:27,3,0	1/1:5,0:4:8.90:60,9,0	1/1:8,0:5:14.87:108,15,0	1/1:7,0:4:11.95:95,12,0	1/1:2,0:2:5.95:42,6,0	1/1:5,0:2:5.98:50,6,0	1/1:1,0:1:2.98:21,3,0	1/1:2,0:1:3.01:38,3,0	./.	1/1:3,0:1:3:25,3,0	1/1:5,0:2:6.01:62,6,0	./.	./.	1/1:3,0:2:5.93:40,6,0	./.
chr10	55144880	.	GAAAAA	G	8694.20	PASS	AB=0.593;AC=35;AF=0.625;AN=56;BaseQRankSum=-7.187;DP=657;FS=13.177;HRun=16;HaplotypeScore=148.0768;InbreedingCoeff=0.6315;MQ=65.58;MQ0=7;MQRankSum=-3.008;QD=18.46;ReadPosRankSum=8.187;VQSLOD=0.4531;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,17:21:15.44:363,15,0	0/0:1,0:7:15.94:0,16,83	0/0:37,0:15:22.03:0,22,322	0/0:29,0:21:30.15:0,30,507	1/1:8,26:35:49.56:834,50,0	1/1:2,20:23:50.55:747,51,0	1/1:3,15:18:17.51:259,18,0	0/0:24,0:24:47.66:0,48,822	1/1:6,10:17:26.97:402,27,0	1/1:8,24:35:70.80:914,71,0	1/1:0,8:11:28.67:326,29,0	0/1:10,1:24:52.73:68,0,53	0/1:7,0:32:5.21:71,0,5	1/1:5,18:24:39.01:590,39,0	1/1:5,26:31:54.08:805,54,0	1/1:7,1:20:17.65:120,18,0	1/1:8,21:29:44.92:700,45,0	1/1:4,21:26:20.74:675,21,0	0/0:25,0:25:35.93:0,36,850	0/0:15,0:15:29.97:0,30,517	0/0:8,0:8:14.40:0,14,201	0/1:4,0:16:21.09:25,0,21	0/1:11,0:25:27.58:41,0,28	0/1:5,0:23:9.02:70,0,9	1/1:2,11:13:24.04:374,24,0	1/1:7,27:37:83.17:1048,83,0	0/0:37,0:36:34.36:0,34,667	1/1:1,8:10:18.03:263,18,0
chr10	55144885	.	A	AC	964.53	PASS	AB=0.593;AC=7;AF=0.125;AN=56;BaseQRankSum=-5.360;DP=642;FS=9.329;HRun=0;HaplotypeScore=135.2312;InbreedingCoeff=0.4872;MQ=62.77;MQ0=7;MQRankSum=5.752;QD=8.17;ReadPosRankSum=-3.974;VQSLOD=2.1376;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:41.71:0,42,306	0/0:9,0:9:20.19:0,20,154	0/0:40,0:15:24.25:0,24,245	0/0:27,0:17:26.85:0,27,320	0/0:33,0:33:48.07:0,48,392	0/0:23,0:23:54.10:0,54,396	0/0:18,0:18:19.19:0,19,128	1/1:5,22:28:21.61:414,22,0	0/0:15,0:15:35.27:0,35,253	0/0:33,0:33:56.54:0,57,481	0/0:11,0:11:21.24:0,21,144	0/0:22,0:22:44.76:0,45,341	0/0:29,0:29:50.45:0,50,391	0/0:24,0:24:47.66:0,48,352	0/0:28,0:28:51.56:0,52,372	0/0:22,0:21:56.69:0,57,429	0/0:26,0:26:59.54:0,60,437	0/0:26,0:26:59.52:0,60,429	0/1:9,17:26:23.58:334,0,24	1/1:2,12:16:8.29:187,8,0	0/1:3,5:9:14.31:29,0,14	0/0:14,0:14:35.53:0,36,251	0/0:22,0:22:51.68:0,52,394	0/0:24,0:24:44.79:0,45,337	0/0:12,0:12:26.79:0,27,191	0/0:35,0:35:78.84:0,79,533	0/1:10,25:38:18.59:137,0,19	0/0:10,0:10:20.86:0,21,154
chr10	55149189	.	GTGTT	G	11616.16	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=1.704;DP=750;FS=4.496;HRun=0;HaplotypeScore=135.0404;InbreedingCoeff=0.9464;MQ=64.04;MQ0=3;MQRankSum=3.604;QD=21.79;ReadPosRankSum=6.117;VQSLOD=4.2916;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,29:42:54.18:850,54,0	1/1:4,0:8:9.01:84,9,0	0/0:26,0:19:3.77:0,4,155	0/0:27,0:22:21.07:0,21,474	1/1:7,17:24:27.09:419,27,0	1/1:9,16:25:27.09:431,27,0	1/1:5,11:16:30.10:479,30,0	0/0:46,0:44:48.12:0,48,745	1/1:11,20:31:45.15:704,45,0	1/1:10,16:25:45.14:693,45,0	1/1:5,9:14:15.05:239,15,0	1/1:10,19:29:42.14:668,42,0	1/1:9,17:27:45.15:709,45,0	1/1:3,13:16:27.09:408,27,0	1/1:13,26:39:66.06:1054,66,0	1/1:12,0:28:33.04:307,33,0	1/1:10,19:29:49.41:811,49,0	1/1:10,16:26:39.12:623,39,0	0/0:26,0:31:42.13:0,42,879	0/0:17,0:27:45.10:0,45,672	0/0:22,0:31:18.06:0,18,296	1/1:13,10:23:11.32:190,11,0	1/1:3,17:19:21.07:325,21,0	1/1:10,26:37:60.20:935,60,0	1/1:7,21:28:45.15:708,45,0	1/1:13,15:29:48.12:693,48,0	0/0:16,0:29:36.12:0,36,669	1/1:8,6:14:18.06:287,18,0
chr10	55149824	.	TACACAC	T	1664	PASS	AC=22;AF=0.440;AN=50;BaseQRankSum=2.637;DP=482;FS=3.915;HRun=0;HaplotypeScore=108.1522;InbreedingCoeff=0.7565;MQ=65.22;MQ0=4;MQRankSum=-6.330;QD=8.28;ReadPosRankSum=1.925;VQSLOD=1.9896;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:26,7:33:9.03:182,9,0	0/0:2,0:3:3.01:0,3,38	./.	./.	1/1:5,3:8:6.02:96,6,0	0/0:11,0:14:15.03:0,15,282	0/0:28,0:32:21.07:0,21,291	0/0:13,0:12:8.06:0,8,114	1/1:11,1:16:6.55:64,7,0	1/1:11,3:13:5.70:120,6,0	1/1:7,0:8:3.01:42,3,0	0/0:17,0:26:45.62:0,46,1130	0/0:11,0:16:27.51:0,28,624	1/1:12,6:18:15.05:302,15,0	1/1:10,6:16:15.05:302,15,0	0/0:18,0:21:15.02:0,15,182	1/1:16,7:27:22.89:392,23,0	1/1:15,3:18:5.98:81,6,0	0/0:9,0:9:3:0,3,27	0/0:6,0:8:8.98:0,9,122	0/0:26,0:29:15.05:0,15,221	0/0:14,0:14:15.22:0,15,468	0/0:10,0:15:17.65:0,18,481	0/0:18,0:31:45.15:0,45,1246	1/1:7,7:14:3.01:61,3,0	1/1:24,4:29:12.90:207,13,0	0/0:9,0:10:5.03:0,5,100	./.
chr10	55150049	.	G	GCCC	1289.45	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-1.681;DP=507;FS=4.704;HRun=8;HaplotypeScore=75.5738;InbreedingCoeff=0.9558;MQ=78.30;MQ0=0;MQRankSum=-1.035;QD=18.96;ReadPosRankSum=-3.277;VQSLOD=0.2702;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,114,1496	0/0:0,0:9:26.33:0,26,157	0/0:11,0:11:7.88:0,8,148	0/0:13,0:13:20.89:0,21,229	0/0:21,0:21:57.16:0,57,734	0/0:15,0:15:42.12:0,42,552	0/0:16,0:16:45.14:0,45,588	1/1:4,6:11:18.04:310,18,0	0/0:22,0:22:54.13:0,54,678	0/0:14,0:14:36.11:0,36,473	0/0:9,0:9:24.06:0,24,315	0/0:21,0:21:42.11:0,42,552	0/0:23,0:23:66.19:0,66,851	0/0:15,0:15:39.12:0,39,512	0/0:25,0:25:69.19:0,69,876	0/0:1,0:15:38.19:0,38,233	0/0:36,0:36:99:0,99,1301	0/0:23,0:23:63.18:0,63,812	1/1:4,4:9:15:225,15,0	1/1:5,4:9:13.81:246,14,0	1/1:6,2:13:9.46:85,9,0	0/0:21,0:21:57.18:0,57,749	0/0:24,0:24:69.22:0,69,903	0/0:12,0:12:17.99:0,18,221	0/0:22,0:22:60.15:0,60,768	0/0:20,0:20:45.11:0,45,591	1/1:5,19:26:33.07:591,33,0	0/0:12,0:12:24.07:0,24,313
chr10	55150285	.	G	GA	17005.97	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-5.156;DP=690;FS=29.244;HRun=9;HaplotypeScore=73.9259;InbreedingCoeff=0.8979;MQ=59.65;MQ0=7;MQRankSum=0.277;QD=25.61;ReadPosRankSum=3.463;VQSLOD=3.4773;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,47:51:99:1437,126,0	1/1:0,10:10:24.07:277,24,0	0/0:8,0:4:11.96:0,12,102	0/0:18,0:10:29.96:0,30,259	1/1:6,9:14:30.05:323,30,0	1/1:2,23:25:54.16:621,54,0	1/1:6,26:31:51.15:589,51,0	1/1:4,23:26:66.20:762,66,0	1/1:4,26:30:60.18:690,60,0	1/1:3,24:27:66.14:732,66,0	1/1:6,10:16:42.11:470,42,0	1/1:1,29:30:63.19:727,63,0	1/1:4,15:19:33.09:381,33,0	1/1:2,24:26:57.17:658,57,0	1/1:2,24:26:60.14:668,60,0	1/1:0,22:22:47.93:553,48,0	1/1:5,44:49:99:1246,108,0	1/1:4,23:27:54.16:622,54,0	1/1:2,22:23:63.19:726,63,0	1/1:6,25:30:78.22:885,78,0	1/1:0,21:21:51.15:589,51,0	1/1:5,24:29:63.14:696,63,0	1/1:3,20:23:23.84:527,24,0	1/1:3,22:25:54.16:623,54,0	1/1:0,17:18:44.97:499,45,0	1/1:2,22:24:65.98:725,66,0	1/1:8,23:31:84.04:946,84,0	1/1:3,2:4:3.01:35,3,0
chr10	55150415	.	CAG	C	104.58	PASS	AB=0.994;AC=10;AF=0.185;AN=54;BaseQRankSum=9.082;DP=734;FS=3.789;HRun=0;HaplotypeScore=174.2427;InbreedingCoeff=0.0763;MQ=66.79;MQ0=14;MQRankSum=-8.056;QD=0.50;ReadPosRankSum=0.313;VQSLOD=2.7843;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:36:31.56:0,32,374	0/0:16,0:16:17.92:0,18,183	0/1:52,2:28:16.90:17,0,664	0/0:64,1:33:50.76:0,51,587	0/0:25,1:26:6.02:0,6,92	0/0:23,0:23:25.08:0,25,291	0/0:16,0:15:5.05:0,5,133	0/0:23,0:23:42.14:0,42,666	0/1:21,0:19:16.82:17,0,79	0/1:27,0:27:88.68:89,0,145	0/0:16,0:16:2.84:0,3,14	0/0:25,0:25:48.16:0,48,791	0/0:18,0:18:48.10:0,48,767	./.	0/0:22,0:22:6.02:0,6,78	0/0:23,0:23:26.86:0,27,257	0/1:33,0:32:16.10:16,0,68	0/1:14,0:13:28.68:29,0,39	0/0:16,0:16:36.11:0,36,561	0/0:19,0:19:51.17:0,51,847	0/0:44,0:44:96.29:0,96,1535	0/0:29,0:29:72.23:0,72,1162	0/0:21,0:21:57.19:0,57,950	0/0:51,0:51:99:0,102,1687	1/1:21,0:21:2.68:11,3,0	0/1:30,0:30:48.61:49,0,263	0/0:16,0:15:36.12:0,36,594	1/1:11,0:10:2.68:11,3,0
chr10	55150419	.	GAGAGAGAGAC	G	6824.77	PASS	AB=0.790;AC=26;AF=0.481;AN=54;BaseQRankSum=7.184;DP=719;FS=0.906;HRun=0;HaplotypeScore=222.0066;InbreedingCoeff=0.6800;MQ=65.97;MQ0=15;MQRankSum=-5.109;QD=20.74;ReadPosRankSum=-0.365;VQSLOD=4.0989;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:32,2:33:30.08:520,30,0	0/1:16,0:16:40.73:209,0,41	0/0:52,0:26:26.04:0,26,466	0/0:64,0:32:29.23:0,29,500	0/1:7,15:22:0:0,0,0	1/1:11,12:23:26.96:452,27,0	1/1:10,6:15:18.06:388,18,0	0/0:24,0:22:39.13:0,39,1550	1/1:5,17:20:9.03:276,9,0	1/1:4,26:30:75.06:1655,75,0	1/1:2,12:14:3.01:53,3,0	0/0:22,0:22:42.14:0,42,1701	0/0:17,0:17:45.15:0,45,1715	./.	1/1:11,9:20:18.06:379,18,0	0/1:24,0:24:41.20:378,0,41	0/1:8,26:33:5.94:266,0,6	1/1:9,3:11:18.06:560,18,0	0/0:19,0:19:42.13:0,42,1179	0/0:20,0:20:48.16:0,48,2057	0/0:42,0:42:84.26:0,84,3095	0/0:28,0:28:63.20:0,63,2424	0/0:20,0:20:54.19:0,54,2345	0/0:49,0:49:96.29:0,96,3988	1/1:1,18:19:3.01:93,3,0	1/1:6,24:30:69.05:1504,69,0	0/0:15,0:15:36.12:0,36,1411	1/1:2,11:12:3.01:93,3,0
chr10	55150433	.	GAGAGACAGAGAC	G	2422.65	PASS	AB=1.000;AC=16;AF=0.286;AN=56;BaseQRankSum=11.325;DP=708;FS=1.067;HRun=0;HaplotypeScore=248.4546;InbreedingCoeff=0.0503;MQ=59.08;MQ0=20;MQRankSum=-7.817;QD=7.55;ReadPosRankSum=4.141;VQSLOD=1.7601;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:35,0:40:30.20:30,0,197	1/1:1,19:20:15.03:442,15,0	0/0:43,0:17:11.92:0,12,144	0/0:51,0:21:14.44:0,14,166	0/0:18,0:18:2.93:0,3,58	0/1:19,0:24:29.44:29,0,70	0/1:8,0:11:2.35:55,0,2	0/0:27,0:22:60.21:0,60,1602	0/1:20,0:19:88.31:88,0,100	0/1:28,0:28:99:430,0,181	0/0:14,0:14:4.57:0,5,62	0/0:21,0:21:42.13:0,42,1650	0/0:20,0:20:54.10:0,54,1783	0/1:17,0:16:0:0,0,0	0/1:18,0:24:3.21:62,0,3	1/1:3,20:23:21.07:724,21,0	0/1:29,0:28:89.56:94,0,90	0/1:14,0:15:99:238,0,218	0/0:19,0:18:36.05:0,36,1077	0/0:20,0:20:48.16:0,48,1896	0/0:37,0:36:75.22:0,75,2868	0/0:25,0:25:54.15:0,54,2041	0/0:26,0:25:66.18:0,66,2329	0/0:52,0:52:99:0,114,4227	0/1:20,0:20:26.39:26,0,106	0/1:33,0:33:99:337,0,648	0/0:13,0:13:27.09:0,27,1397	0/1:12,0:11:29.30:29,0,46
chr10	55150443	.	G	GAC	60.78	PASS	AB=0.989;AC=7;AF=0.125;AN=56;BaseQRankSum=6.559;DP=715;FS=5.416;HRun=0;HaplotypeScore=171.0974;InbreedingCoeff=0.0852;MQ=51.93;MQ0=20;MQRankSum=-3.372;QD=0.43;ReadPosRankSum=2.077;VQSLOD=2.5286;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:37:25.01:0,25,362	0/1:19,0:19:7.56:35,0,8	0/0:21,0:6:11.93:0,12,145	0/0:31,0:12:15.83:0,16,133	0/0:20,0:19:3.01:0,3,43	0/1:23,0:23:4.75:5,0,259	0/1:14,0:13:16.45:16,0,81	0/0:34,0:27:78.23:0,78,1055	0/0:24,0:22:22.27:0,22,261	0/1:30,0:30:19.75:20,0,534	0/0:17,0:16:5.75:0,6,67	0/0:24,0:24:50.97:0,51,641	0/0:24,0:24:60.10:0,60,793	0/0:20,0:19:5.98:0,6,67	0/0:23,1:24:12.79:0,13,212	1/1:20,0:20:2.17:37,2,0	0/0:34,0:33:11.67:0,12,109	0/0:18,0:18:39.24:0,39,503	0/0:19,0:18:42.03:0,42,528	0/0:21,0:21:51.14:0,51,706	0/0:40,1:39:80.87:0,81,1102	0/0:25,0:25:66.09:0,66,827	0/0:30,0:29:78.19:0,78,1031	0/0:54,0:54:99:0,133,1811	0/0:25,0:25:24.02:0,24,284	0/1:33,2:35:68.05:68,0,647	0/0:11,0:11:27.09:0,27,386	0/0:17,0:16:20.99:0,21,220
chr10	55150552	.	A	AGAGGAG	12872.17	PASS	AB=0.622;AC=51;AF=0.911;AN=56;BaseQRankSum=-3.533;DP=604;FS=5.209;HRun=0;HaplotypeScore=109.3721;InbreedingCoeff=0.4789;MQ=53.33;MQ0=21;MQRankSum=-3.115;QD=25.14;ReadPosRankSum=1.357;VQSLOD=4.3865;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,16:30:26.44:862,26,0	1/1:3,8:11:8.84:215,9,0	0/0:43,0:19:11.36:0,11,102	0/0:48,0:17:4.49:0,4,100	1/1:3,8:10:9.03:280,9,0	1/1:8,15:26:24.03:711,24,0	1/1:7,10:18:9.03:289,9,0	1/1:22,0:22:36.12:777,36,0	0/1:11,10:28:14.16:670,0,14	1/1:7,14:21:42.14:1047,42,0	1/1:3,4:10:6.02:198,6,0	1/1:10,15:29:30.05:841,30,0	1/1:6,9:16:12.04:387,12,0	1/1:9,8:17:21.07:660,21,0	1/1:10,17:28:18.03:503,18,0	1/1:4,19:25:33.07:1011,33,0	1/1:9,10:24:15.83:337,16,0	1/1:9,7:17:17.20:390,17,0	1/1:17,0:14:9.03:224,9,0	1/1:8,0:8:6.02:170,6,0	1/1:32,0:31:9.03:256,9,0	1/1:3,8:13:12:397,12,0	1/1:2,10:16:15:415,15,0	1/1:11,15:30:14.94:334,15,0	1/1:3,7:13:9.03:297,9,0	1/1:14,11:29:42.14:1102,42,0	1/1:12,0:12:11.85:340,12,0	1/1:7,0:7:6.02:159,6,0
chr10	55150560	.	A	AGGAGGG	10904.02	PASS	AB=1.000;AC=31;AF=0.554;AN=56;BaseQRankSum=4.800;DP=690;FS=15.850;HRun=0;HaplotypeScore=132.8970;InbreedingCoeff=-0.5242;MQ=54.20;MQ0=23;MQRankSum=-7.187;QD=18.87;ReadPosRankSum=10.907;VQSLOD=2.0289;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:34,0:34:99:628,0,219	0/1:11,0:11:13.67:158,0,14	0/0:49,0:16:5.63:0,6,253	0/0:57,0:17:22.61:0,23,229	0/1:16,0:15:34.93:203,0,35	0/1:27,0:27:68.07:534,0,68	0/1:19,0:19:74.85:135,0,75	1/1:27,0:27:60.02:1194,60,0	0/1:27,0:27:99:528,0,153	0/1:23,0:22:98.79:671,0,99	0/1:13,0:13:90.84:141,0,91	0/1:26,0:26:83.39:649,0,83	0/1:19,0:19:99:285,0,119	0/1:18,0:17:28.85:514,0,29	0/1:31,0:31:84.10:370,0,84	0/1:27,0:27:48.38:773,0,48	0/1:22,0:22:11.29:167,0,11	0/1:19,0:19:99:194,0,142	1/1:6,13:19:47.96:633,48,0	1/1:2,7:22:26.77:347,27,0	1/1:4,25:32:8.72:313,9,0	0/1:16,0:16:53.90:304,0,54	0/1:18,0:17:5.28:316,0,5	0/1:34,0:34:99:383,0,144	0/1:18,0:18:90.75:217,0,91	0/1:33,0:33:99:720,0,214	1/1:2,9:14:11.31:417,11,0	0/1:9,0:9:12.96:109,0,13
chr10	55152281	.	TG	T	968.25	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.383;DP=548;FS=2.550;HRun=1;HaplotypeScore=75.9803;InbreedingCoeff=0.9952;MQ=77.36;MQ0=0;MQRankSum=0.118;QD=35.86;ReadPosRankSum=2.075;VQSLOD=4.0466;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:90.31:0,90,1439	1/1:0,8:8:24.08:336,24,0	0/0:7,0:7:21.07:0,21,326	0/0:19,0:20:43.64:0,44,730	0/0:24,0:24:72.25:0,72,1148	0/0:19,0:18:57.19:0,57,907	0/0:15,0:15:45.15:0,45,716	0/0:18,0:18:54.17:0,54,838	0/0:31,0:31:93.30:0,93,1454	0/0:26,0:26:78.27:0,78,1247	0/0:9,0:9:24.08:0,24,384	0/0:22,0:22:66.21:0,66,1028	0/0:15,0:15:42.11:0,42,642	0/0:27,0:27:81.28:0,81,1295	0/0:29,0:29:87.27:0,87,1342	1/1:0,19:19:54.18:754,54,0	0/0:31,0:31:93.32:0,93,1477	0/0:14,0:14:42.14:0,42,660	0/0:10,0:10:30.08:0,30,455	0/0:20,0:20:51.17:0,51,813	0/0:20,0:20:48.15:0,48,731	0/0:17,0:17:51.16:0,51,790	0/0:10,0:10:30.09:0,30,457	0/0:28,0:28:84.29:0,84,1343	0/0:25,0:25:75.24:0,75,1174	0/0:22,0:22:66.22:0,66,1046	0/0:15,0:15:42.14:0,42,667	0/0:17,0:17:48.16:0,48,763
chr10	55152310	.	TCCACTAGGTGGCGCAGGCGCA	T	5230.72	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=9.198;DP=501;FS=9.838;HRun=0;HaplotypeScore=275.5109;InbreedingCoeff=0.9657;MQ=71.39;MQ0=0;MQRankSum=-4.923;QD=78.07;ReadPosRankSum=-0.810;VQSLOD=2.8468;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:63.22:0,63,5506	0/0:10,0:10:27.08:0,27,1820	0/0:7,0:7:6.73:0,7,679	0/0:8,0:8:16.73:0,17,433	0/0:21,0:21:60.20:0,60,4224	0/0:15,0:15:45.15:0,45,3763	0/0:18,0:18:54.17:0,54,4410	1/1:10,9:19:27.08:916,27,0	0/0:28,0:28:78.25:0,78,6733	0/0:17,0:17:20.21:0,20,3359	0/0:8,0:8:24.08:0,24,1779	0/0:24,0:24:69.24:0,69,6661	0/0:14,0:14:42.14:0,42,3819	0/0:25,0:25:75.24:0,75,5887	0/0:27,0:27:75.24:0,75,6444	0/0:17,0:17:48.16:0,48,4057	0/0:38,0:38:99:0,111,9727	0/0:17,0:17:48.16:0,48,4682	1/1:3,7:10:21.05:826,21,0	1/1:4,12:16:36.08:1580,36,0	1/1:5,6:11:12.04:511,12,0	0/0:19,0:19:54.19:0,54,3878	0/0:11,0:11:30.10:0,30,2068	0/0:25,0:25:72.25:0,72,7062	0/0:26,0:26:78.27:0,78,6018	0/0:21,0:21:60.21:0,60,4693	1/1:4,7:11:24.08:1398,24,0	0/0:15,0:15:45.15:0,45,3742
chr10	55152352	.	G	GC	604.30	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=-2.296;DP=525;FS=2.717;HRun=8;HaplotypeScore=80.8323;InbreedingCoeff=0.7703;MQ=68.10;MQ0=0;MQRankSum=-2.112;QD=15.49;ReadPosRankSum=-0.754;VQSLOD=3.7682;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,1:28:31.40:0,31,542	1/1:3,11:14:33.09:373,33,0	0/1:12,0:11:8.14:8,0,115	0/0:12,0:12:20.79:0,21,185	0/0:23,0:23:57:0,57,516	0/0:18,0:17:45.02:0,45,412	0/0:22,0:22:57.03:0,57,522	0/0:22,0:22:53.98:0,54,486	0/0:22,0:22:48.01:0,48,439	0/0:16,0:16:48.03:0,48,439	0/0:13,0:13:36.01:0,36,329	0/0:30,0:30:68.96:0,69,622	0/0:14,0:14:42.02:0,42,384	0/0:13,0:13:39.02:0,39,357	0/0:21,0:21:51.01:0,51,462	1/1:3,10:13:8.63:343,9,0	0/0:38,0:38:96:0,96,871	0/0:15,0:15:33:0,33,302	0/0:18,0:18:36.02:0,36,329	0/0:19,0:19:33.01:0,33,302	0/0:20,0:20:42.02:0,42,384	0/0:16,0:16:41.52:0,42,365	0/0:15,0:15:39.02:0,39,357	0/0:29,0:29:66:0,66,598	0/0:14,0:14:33.01:0,33,302	0/0:18,0:18:48.02:0,48,439	0/0:13,0:13:32.96:0,33,292	0/0:17,0:17:51.03:0,51,467
chr10	55152739	.	C	CT	5938.91	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-12.480;DP=709;FS=1.632;HRun=2;HaplotypeScore=66.2363;InbreedingCoeff=0.9998;MQ=89.12;MQ0=0;MQRankSum=-3.328;QD=42.12;ReadPosRankSum=-0.210;VQSLOD=4.5383;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:81.27:0,81,1132	1/1:0,10:10:27.09:432,27,0	0/0:31,0:31:84.27:0,84,1140	0/0:21,0:20:51.21:0,51,652	0/0:33,0:33:99:0,99,1364	0/0:23,0:23:69.21:0,69,944	0/0:20,0:20:60.17:0,60,799	1/1:0,16:16:48.15:745,48,0	0/0:25,0:25:75.24:0,75,1032	0/0:31,0:31:93.31:0,93,1300	0/0:22,0:22:66.21:0,66,906	0/0:34,0:34:99:0,99,1385	0/0:29,0:29:87.28:0,87,1199	0/0:16,0:16:48.16:0,48,670	0/0:28,0:28:84.27:0,84,1158	1/1:0,28:28:72.25:1151,72,0	0/0:42,0:42:99:0,126,1761	0/0:27,0:27:81.16:0,81,1048	1/1:0,15:15:45.12:686,45,0	1/1:1,21:22:57.19:911,57,0	1/1:0,24:24:54.18:863,54,0	0/0:37,0:37:99:0,111,1525	0/0:23,0:23:63.21:0,63,878	0/0:26,0:26:72.22:0,72,986	0/0:20,0:20:57.19:0,57,793	0/0:30,0:30:87.28:0,87,1202	1/1:0,26:25:72.25:1151,72,0	0/0:22,0:22:66.22:0,66,921
chr10	55152996	.	TA	T	11547.41	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=0.925;DP=747;FS=0.883;HRun=5;HaplotypeScore=84.2822;InbreedingCoeff=0.9999;MQ=83.12;MQ0=0;MQRankSum=-4.428;QD=30.79;ReadPosRankSum=4.277;VQSLOD=5.2737;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,29:29:78.22:885,78,0	0/0:12,0:12:30.09:0,30,395	0/0:21,0:21:51.27:0,51,713	0/0:21,0:21:54.16:0,54,717	1/1:1,33:34:99:1120,99,0	1/1:0,19:19:48.14:544,48,0	1/1:0,16:16:42.12:476,42,0	0/0:43,0:43:99:0,123,1667	1/1:3,29:32:84.24:953,84,0	1/1:1,44:45:99:1462,129,0	1/1:0,19:19:54.15:609,54,0	0/0:39,0:39:99:0,114,1533	0/0:25,0:25:75.25:0,75,1024	1/1:0,19:19:54.15:613,54,0	1/1:1,31:32:90.26:1019,90,0	0/0:23,0:23:66.22:0,66,902	1/1:3,24:27:63.18:715,63,0	1/1:1,16:17:42.12:475,42,0	0/0:16,0:16:42.14:0,42,574	0/0:31,0:31:93.29:0,93,1241	0/0:34,0:34:93.27:0,93,1238	0/0:34,0:34:99:0,99,1339	0/0:24,0:24:72.22:0,72,946	0/0:20,0:20:57.19:0,57,779	1/1:0,29:29:78.22:885,78,0	1/1:0,31:31:93.25:1044,93,0	0/0:29,0:29:87.28:0,87,1175	1/1:2,24:26:66.19:749,66,0
chr10	55156863	.	C	CG	4269.56	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-11.991;DP=607;FS=1.765;HRun=4;HaplotypeScore=71.2430;InbreedingCoeff=0.9818;MQ=81.76;MQ0=0;MQRankSum=-0.582;QD=33.10;ReadPosRankSum=-2.169;VQSLOD=4.5609;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:72.18:0,72,804	0/0:14,0:14:30.08:0,30,340	0/0:13,0:13:21.01:0,21,235	0/0:20,0:20:53.85:0,54,537	0/0:11,0:11:13.09:0,13,258	0/0:13,0:13:39.07:0,39,425	0/0:23,0:23:54.12:0,54,594	1/1:2,26:28:78.11:1021,78,0	0/0:23,0:23:69.13:0,69,754	0/0:24,0:24:57.14:0,57,628	0/0:9,0:9:10.77:0,11,200	0/0:34,0:34:96.27:0,96,1087	0/0:25,0:25:66.18:0,66,748	0/0:29,0:29:81.21:0,81,908	0/0:23,0:23:60.17:0,60,679	0/0:22,0:22:60.17:0,60,680	0/0:28,0:28:75.17:0,75,836	0/0:37,0:37:99:0,102,1128	1/1:2,10:13:33.10:429,33,0	1/1:2,16:18:48.04:609,48,0	1/1:2,44:46:99:1391,102,0	0/0:15,0:15:28.61:0,29,337	0/0:17,0:17:33.98:0,34,373	0/0:23,0:23:66.15:0,66,734	0/0:14,0:14:36.09:0,36,398	0/0:29,0:29:63.17:0,63,713	1/1:1,23:24:60.20:820,60,0	0/0:6,0:6:18.05:0,18,204
chr10	55157083	.	TC	T	14634.14	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=9.604;DP=618;FS=0.330;HRun=3;HaplotypeScore=62.2341;InbreedingCoeff=0.9984;MQ=83.51;MQ0=0;MQRankSum=-3.862;QD=33.41;ReadPosRankSum=3.478;VQSLOD=5.3162;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,29:30:72.23:892,72,0	0/0:8,0:8:18.06:0,18,256	0/0:23,0:23:66.19:0,66,922	0/0:14,0:14:36.11:0,36,499	1/1:0,20:20:51.16:632,51,0	1/1:0,21:21:60.19:744,60,0	1/1:0,21:21:60.19:744,60,0	1/1:3,31:34:90.28:1113,90,0	1/1:0,17:17:48.15:595,48,0	1/1:0,20:20:57.17:694,57,0	1/1:0,10:10:27.08:335,27,0	0/0:34,0:34:99:0,99,1389	0/0:23,0:23:69.21:0,69,954	1/1:1,26:27:75.24:929,75,0	1/1:2,30:32:72.23:893,72,0	0/0:19,0:19:57.18:0,57,800	1/1:1,26:27:69.22:855,69,0	1/1:1,25:26:75.24:930,75,0	1/1:1,16:17:42.13:521,42,0	1/1:0,13:13:39.12:483,39,0	1/1:1,39:40:99:1376,111,0	0/0:13,0:13:36.12:0,36,515	0/0:13,0:13:39.13:0,39,560	0/0:33,0:33:99:0,99,1417	1/1:0,22:22:63.20:781,63,0	1/1:0,28:28:81.25:1003,81,0	1/1:0,24:24:63.20:778,63,0	1/1:0,9:9:27.08:335,27,0
chr10	55157780	.	AGAGAGG	A	4453.09	PASS	AB=0.977;AC=23;AF=0.411;AN=56;BaseQRankSum=-6.217;DP=601;FS=12.382;HRun=0;HaplotypeScore=123.9817;InbreedingCoeff=-0.3501;MQ=65.97;MQ0=26;MQRankSum=-0.097;QD=10.43;ReadPosRankSum=1.675;VQSLOD=3.2409;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:27:59.64:493,60,0	0/1:9,0:6:37.24:37,0,50	0/0:31,0:16:33.34:0,33,266	0/0:37,0:19:44.63:0,45,468	0/1:27,0:27:99:271,0,125	0/1:18,0:17:41.92:210,0,42	0/1:36,0:36:99:436,0,115	0/1:24,0:23:99:240,0,122	0/1:15,0:15:95.75:96,0,244	0/1:18,0:18:99:143,0,307	0/1:10,0:10:60.81:61,0,94	0/0:19,0:19:39.08:0,39,607	0/0:16,0:15:36.45:0,36,639	0/1:25,0:25:99:180,0,193	0/1:25,0:25:99:218,0,194	1/1:11,0:11:32.95:349,33,0	0/1:5,19:24:16.96:136,0,17	0/1:14,0:13:86.03:144,0,86	0/1:17,0:16:1.04:309,0,1	0/1:17,0:17:9.05:232,0,9	0/1:41,0:40:99:237,0,473	0/0:28,0:27:61.42:0,61,666	0/0:19,0:19:44.99:0,45,496	0/0:24,0:24:57.08:0,57,810	0/1:19,0:19:99:250,0,124	0/1:20,0:20:99:243,0,228	0/1:14,0:14:27.78:28,0,300	0/1:15,0:11:60.34:141,0,60
chr10	55157784	.	AGG	A	5988.83	PASS	AB=1.000;AC=39;AF=0.696;AN=56;BaseQRankSum=-2.560;DP=594;FS=14.970;HRun=4;HaplotypeScore=86.0103;InbreedingCoeff=0.7517;MQ=67.83;MQ0=26;MQRankSum=-0.437;QD=14.23;ReadPosRankSum=-0.108;VQSLOD=0.9836;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:29:62.55:516,63,0	1/1:8,0:5:10.42:73,10,0	0/0:32,0:17:33.95:0,34,286	0/0:38,0:20:47.63:0,48,493	1/1:24,0:24:47.54:372,48,0	1/1:19,0:18:20.04:264,20,0	1/1:36,0:36:81.33:642,81,0	1/1:24,0:23:32.79:286,33,0	1/1:15,0:15:18.28:230,18,0	1/1:17,0:17:17.75:244,18,0	0/1:9,0:9:7.81:64,0,8	0/0:19,0:19:38.82:0,39,364	0/0:16,0:15:30.30:0,30,312	1/1:25,0:25:17.61:241,18,0	1/1:26,0:26:23.73:327,24,0	1/1:12,0:12:35.90:290,36,0	0/1:24,0:24:16.99:44,0,17	1/1:13,1:13:11.02:249,11,0	1/1:4,12:15:40.49:348,40,0	1/1:18,0:18:35.92:294,36,0	1/1:38,2:39:59.10:635,59,0	0/0:27,0:26:53.86:0,54,471	0/0:19,0:19:44.89:0,45,400	0/0:22,0:22:50.78:0,51,503	1/1:18,0:18:14.77:296,15,0	1/1:20,0:20:43.37:357,43,0	0/1:11,0:11:4.31:46,0,4	1/1:15,0:11:9.02:171,9,0
chr10	55158237	.	AGTGTGTGT	A	1146.71	PASS	AB=0.897;AC=16;AF=0.286;AN=56;BaseQRankSum=1.114;DP=584;FS=0.936;HRun=0;HaplotypeScore=188.9221;InbreedingCoeff=-0.1776;MQ=59.26;MQ0=17;MQRankSum=-0.008;QD=4.07;ReadPosRankSum=1.557;VQSLOD=2.1778;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:28:35.24:41,0,35	0/1:11,0:10:1.21:1,0,27	0/0:26,0:15:2.98:0,3,22	0/0:25,0:15:2.97:0,3,20	0/0:7,1:13:1.93:0,2,17	0/0:14,0:14:13.30:0,13,98	0/1:22,1:24:7.22:7,0,30	0/0:43,0:41:17.76:0,18,123	0/0:12,0:14:3:0,3,26	0/1:20,1:20:81.22:102,0,81	0/0:6,0:9:5.99:0,6,50	1/1:18,4:23:8.13:353,8,0	0/1:22,1:23:66.73:131,0,67	0/0:13,0:14:11.48:0,11,81	0/0:18,0:22:11.92:0,12,116	0/0:19,0:23:33.02:0,33,441	0/1:23,0:26:60.17:222,0,60	0/1:19,0:19:57.96:58,0,60	1/1:9,0:9:2.80:13,3,0	0/0:24,0:23:5.38:0,5,40	0/0:34,0:34:2.99:0,3,41	0/1:11,3:16:33.14:33,0,39	0/1:8,4:12:24.78:56,0,25	0/1:23,2:28:8.49:217,0,8	0/0:13,2:18:11.63:0,12,153	0/1:25,1:25:53.81:54,0,110	0/0:20,0:20:3.60:0,4,81	0/1:10,0:9:3.76:4,0,64
chr10	55158280	.	G	GCA	140.88	PASS	AB=0.914;AC=4;AF=0.071;AN=56;BaseQRankSum=2.212;DP=626;FS=13.521;HRun=0;HaplotypeScore=188.7893;InbreedingCoeff=0.3229;MQ=43.00;MQ0=35;MQRankSum=0.571;QD=2.66;ReadPosRankSum=-0.895;VQSLOD=1.7971;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:22:22.18:0,22,386	0/0:10,0:8:8.70:0,9,85	0/0:18,0:10:25.33:0,25,376	0/0:21,0:6:15.05:0,15,231	0/0:24,0:21:16.57:0,17,228	0/0:20,0:18:26.83:0,27,316	0/0:22,0:22:41.88:0,42,585	0/0:38,0:33:87.07:0,87,1082	0/0:15,0:13:24.08:0,24,354	0/0:26,0:23:69.03:0,69,866	0/0:17,0:17:30.07:0,30,412	0/0:26,0:26:56.23:0,56,690	0/0:17,0:16:37.96:0,38,479	0/0:19,0:19:29.94:0,30,431	0/0:29,0:29:33.35:0,33,458	0/0:33,0:30:30.18:0,30,688	0/0:29,0:28:35.44:0,35,494	0/0:20,0:19:27.35:0,27,451	0/1:13,1:10:30.59:31,0,254	1/1:15,7:22:5.87:91,6,0	0/0:40,2:39:5.09:0,5,47	0/0:22,0:21:33.08:0,33,478	0/0:19,0:18:24.04:0,24,288	0/0:30,0:27:24.83:0,25,304	0/0:21,0:21:29.65:0,30,437	0/0:20,0:18:51.14:0,51,708	0/1:15,2:16:37.28:125,0,37	0/0:9,0:6:18.04:0,18,226
chr10	55158295	.	TGTGC	T	129.26	PASS	AB=1.000;AC=12;AF=0.214;AN=56;BaseQRankSum=9.039;DP=687;FS=54.170;HRun=0;HaplotypeScore=234.4943;InbreedingCoeff=0.2858;MQ=40.51;MQ0=35;MQRankSum=-6.255;QD=0.80;ReadPosRankSum=-4.367;VQSLOD=0.0233;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:26:47.77:0,48,975	1/1:10,0:9:8.24:41,8,0	0/0:43,0:16:48.16:0,48,1205	0/0:43,0:16:48.06:0,48,1020	0/0:26,0:23:13.93:0,14,425	0/1:21,0:19:0.07:0,0,330	0/0:23,0:23:51.11:0,51,1333	0/1:39,0:36:35.84:36,0,895	0/0:18,0:15:17.33:0,17,672	0/0:29,0:25:6.29:0,6,1017	0/0:23,0:23:31.67:0,32,789	0/0:21,0:21:8.27:0,8,766	0/1:16,0:16:2.62:3,0,493	0/0:23,0:23:24.27:0,24,648	0/0:33,0:33:34.45:0,34,803	0/0:31,0:29:59.53:0,60,1517	0/0:30,0:29:48.89:0,49,1391	0/1:19,0:18:0.58:1,0,755	0/1:11,0:9:38.93:39,0,71	1/1:19,2:21:2.50:9,2,0	0/0:32,1:28:2.87:0,3,23	0/0:23,0:22:30.01:0,30,741	0/0:25,0:24:17.96:0,18,511	0/0:29,0:27:6.54:0,7,382	0/0:21,0:20:2.59:0,3,575	0/0:23,0:21:59.75:0,60,1434	1/1:14,1:14:14.73:115,15,0	0/1:10,0:10:23.66:24,0,259
chr10	55158304	.	G	GTA	247.24	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=7.061;DP=748;FS=0.660;HRun=0;HaplotypeScore=256.6508;InbreedingCoeff=0.1195;MQ=39.77;MQ0=29;MQRankSum=-7.404;QD=2.52;ReadPosRankSum=-4.463;VQSLOD=1.7716;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:54.04:0,54,738	0/1:14,0:13:4.20:4,0,14	0/0:64,0:20:59.79:0,60,818	0/0:56,0:19:57.11:0,57,835	0/0:30,0:27:5.56:0,6,215	0/0:22,0:20:17.90:0,18,250	0/0:26,0:26:48.43:0,48,735	0/1:35,0:36:82.05:292,0,82	0/0:22,0:20:23.13:0,23,386	0/0:30,0:28:74.99:0,75,966	0/0:24,0:24:23.15:0,23,407	0/0:20,0:20:37.83:0,38,526	0/0:14,0:14:30.03:0,30,402	0/0:23,0:23:26.91:0,27,384	0/0:33,0:33:34.60:0,35,484	0/0:32,0:30:63.18:0,63,937	0/0:31,0:31:63.13:0,63,891	0/0:26,0:25:26.18:0,26,559	0/0:13,0:11:9.31:0,9,84	0/0:22,0:22:2.73:0,3,17	1/1:23,6:26:1.36:3,1,0	0/0:26,0:25:19.21:0,19,401	0/0:26,0:26:16.90:0,17,274	0/0:22,0:22:7.61:0,8,177	0/0:21,0:20:21.07:0,21,322	0/0:25,0:25:69.13:0,69,982	0/1:19,0:17:36.90:43,0,37	0/0:10,0:10:15.05:0,15,228
chr10	55158307	.	TGTATGTGTGG	T	3864.23	PASS	AB=0.914;AC=16;AF=0.286;AN=56;BaseQRankSum=4.894;DP=744;FS=17.902;HRun=0;HaplotypeScore=298.5090;InbreedingCoeff=0.3025;MQ=39.97;MQ0=25;MQRankSum=-9.127;QD=14.86;ReadPosRankSum=-6.739;VQSLOD=0.1723;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:29:57.06:0,57,2060	0/1:7,6:13:21.43:145,0,21	0/0:67,0:21:45.98:0,46,1919	0/0:60,0:20:57.19:0,57,1909	0/1:34,0:32:4.24:4,0,648	0/1:20,0:19:99:112,0,572	0/0:25,0:25:48.64:0,49,2132	1/1:19,16:35:87.29:2099,87,0	0/1:20,0:19:54.09:54,0,1134	0/0:29,0:27:58.86:0,59,2083	0/0:23,0:23:4.70:0,5,1112	0/0:21,0:21:27.76:0,28,1419	0/0:14,0:14:21.90:0,22,849	0/0:23,0:23:5.50:0,5,1152	0/1:34,0:34:21.68:22,0,1369	0/0:31,0:30:51.13:0,51,2532	0/0:33,0:33:74.82:0,75,2819	0/0:26,0:25:27.95:0,28,1579	1/1:7,5:10:27.09:680,27,0	0/1:7,10:17:0:0,0,1	1/1:19,7:23:2.94:18,3,0	0/0:26,0:25:38.81:0,39,1354	0/0:26,0:26:21.87:0,22,938	0/0:24,0:23:17.47:0,17,655	0/1:20,0:19:56.22:56,0,1017	0/0:25,0:25:72.01:0,72,2437	1/1:13,6:16:31.04:560,31,0	0/1:10,0:10:99:114,0,340
chr10	55158308	.	GTA	G	269.72	PASS	AB=0.981;AC=10;AF=0.179;AN=56;BaseQRankSum=8.486;DP=746;FS=17.159;HRun=0;HaplotypeScore=252.8304;InbreedingCoeff=0.0418;MQ=40.05;MQ0=24;MQRankSum=-7.116;QD=1.58;ReadPosRankSum=-4.853;VQSLOD=0.5026;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:30:56.96:0,57,953	0/1:13,0:13:16.67:17,0,40	0/0:67,0:21:49.27:0,49,1006	0/0:61,0:21:59.76:0,60,918	0/0:34,0:32:9.96:0,10,299	0/1:19,1:19:41.72:42,0,234	0/0:25,0:25:48.16:0,48,925	0/1:35,0:35:73.45:206,0,73	0/0:20,0:19:18.60:0,19,524	0/0:28,0:26:31.24:0,31,1013	0/0:23,0:23:20.43:0,20,459	0/0:21,0:21:15.46:0,15,582	0/0:15,0:15:32.55:0,33,492	0/0:24,0:24:27.13:0,27,471	0/0:32,1:33:22.19:0,22,551	0/0:31,0:30:60.45:0,60,1114	0/0:33,0:33:54.94:0,55,1185	0/0:26,0:25:19.84:0,20,708	0/1:12,0:10:58.91:61,0,59	0/1:16,1:17:0.07:0,0,0	1/1:26,0:23:2.92:17,3,0	0/0:27,0:26:35.31:0,35,532	0/0:26,0:26:18.05:0,18,347	0/0:24,0:23:16.90:0,17,255	0/1:20,0:19:5.47:5,0,373	0/0:24,0:24:69.95:0,70,1189	0/1:17,1:16:32.42:32,0,84	0/1:10,0:10:22.53:23,0,153
chr10	55158309	.	T	TGC	765.32	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=8.311;DP=750;FS=10.285;HRun=0;HaplotypeScore=258.2417;InbreedingCoeff=0.7725;MQ=40.05;MQ0=24;MQRankSum=-8.996;QD=8.23;ReadPosRankSum=-6.805;VQSLOD=1.0687;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:31:57.11:0,57,791	1/1:12,0:12:5.15:77,5,0	0/0:70,0:22:56:0,56,826	0/0:62,0:21:60.14:0,60,882	0/0:34,0:33:6.37:0,6,230	0/0:19,0:18:17.88:0,18,262	0/0:25,0:25:48.43:0,48,780	1/1:35,0:35:81.86:580,82,0	0/0:18,0:17:23.13:0,23,409	0/0:26,0:24:68.45:0,68,963	0/0:22,0:22:23.14:0,23,419	0/0:23,0:23:39.03:0,39,552	0/0:16,0:16:32.95:0,33,407	0/0:23,0:23:26.75:0,27,400	0/0:32,0:32:36.04:0,36,515	0/0:31,0:30:63.65:0,64,980	0/0:33,0:33:72.10:0,72,1012	0/0:28,0:27:33.89:0,34,633	1/1:13,0:11:8.35:91,8,0	0/1:16,0:17:0:0,0,0	0/0:20,6:23:0.47:0,0,1	0/0:29,0:28:11.32:0,11,404	0/0:27,0:27:16.89:0,17,292	0/0:26,0:25:2.15:0,2,181	0/0:19,0:18:21.07:0,21,342	0/0:24,0:24:72.09:0,72,1059	1/1:16,0:14:8.15:157,8,0	0/0:11,0:11:15.05:0,15,231
chr10	55158324	.	GTA	G	572.62	PASS	AB=0.952;AC=8;AF=0.143;AN=56;BaseQRankSum=3.963;DP=792;FS=6.204;HRun=0;HaplotypeScore=265.5805;InbreedingCoeff=0.6451;MQ=38.75;MQ0=29;MQRankSum=-6.533;QD=4.24;ReadPosRankSum=-1.582;VQSLOD=1.6856;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,1:36:72.78:0,73,697	0/0:11,0:11:14.49:0,14,166	0/0:79,0:17:50.91:0,51,629	0/0:69,0:21:56.98:0,57,865	0/0:31,0:30:21.07:0,21,166	0/0:23,0:21:40.29:0,40,269	0/0:23,0:23:44.32:0,44,406	1/1:36,0:36:62.37:411,62,0	0/0:19,0:18:45.09:0,45,426	0/0:27,0:25:46.48:0,46,587	0/0:24,0:24:24.66:0,25,204	0/0:21,1:22:28.16:0,28,313	0/1:14,0:14:1.90:2,0,195	0/0:26,0:26:41.13:0,41,399	0/0:38,0:38:39.46:0,39,526	0/0:31,0:30:48.87:0,49,1101	0/0:28,0:28:64.82:0,65,603	0/0:26,0:25:38.06:0,38,528	0/1:14,1:13:99:110,0,99	0/1:17,3:20:0.07:0,0,0	0/1:31,0:29:0.01:0,0,0	0/0:29,1:29:48.94:0,49,368	0/0:26,1:27:22.01:0,22,187	0/0:27,1:27:22.11:0,22,191	0/0:22,0:21:30.08:0,30,253	0/0:28,0:28:38.55:0,39,615	1/1:19,0:17:28.80:178,29,0	0/0:8,0:8:21.20:0,21,134
chr10	55158326	.	A	ATG	7529.71	PASS	AB=0.821;AC=37;AF=0.661;AN=56;BaseQRankSum=-1.111;DP=807;FS=3.575;HRun=0;HaplotypeScore=249.2591;InbreedingCoeff=0.3432;MQ=39.01;MQ0=28;MQRankSum=2.009;QD=12.89;ReadPosRankSum=1.288;VQSLOD=4.4534;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,30:37:34.83:1087,35,0	0/0:11,0:11:0.97:0,1,98	0/0:80,0:20:24.02:0,24,263	0/0:70,0:22:32.99:0,33,388	1/1:10,0:30:14.14:69,14,0	0/1:15,0:24:4.87:207,0,5	0/1:14,1:23:30.91:153,0,31	0/1:13,0:36:43.12:43,0,107	1/1:11,0:20:21.08:263,21,0	1/1:19,0:25:11.31:240,11,0	0/1:11,0:22:1.61:89,0,2	1/1:12,12:24:48.11:704,48,0	1/1:6,10:16:39.04:585,39,0	1/1:12,0:26:35.16:292,35,0	0/1:18,0:40:5.96:370,0,6	0/0:30,0:29:53.04:0,53,662	1/1:1,25:26:66.22:1066,66,0	1/1:8,19:26:8.25:628,8,0	0/1:10,0:13:0.34:0,0,66	0/1:4,0:20:0:0,0,0	0/0:12,0:29:0.47:0,0,1	1/1:12,18:29:38.12:381,38,0	1/1:7,21:28:20.55:302,21,0	0/1:15,16:30:9.18:209,0,9	1/1:11,0:22:29.92:247,30,0	1/1:13,1:27:30.71:431,31,0	0/1:5,0:19:13.01:16,0,13	1/1:1,0:8:17.97:148,18,0
chr10	55158345	.	A	AGTG	2623.53	PASS	AB=0.624;AC=27;AF=0.482;AN=56;BaseQRankSum=3.517;DP=862;FS=0.000;HRun=0;HaplotypeScore=272.9804;InbreedingCoeff=-0.3965;MQ=44.49;MQ0=33;MQRankSum=0.523;QD=4.13;ReadPosRankSum=4.831;VQSLOD=1.9927;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:89.94:0,90,1572	1/1:3,0:13:7.19:96,7,0	0/0:63,0:16:39.08:0,39,565	0/0:66,0:26:56.08:0,56,995	0/1:8,0:30:29.27:49,0,29	0/1:11,0:24:47.16:47,0,143	0/1:9,0:26:18.45:18,0,183	0/1:24,2:44:99:493,0,696	0/1:11,0:22:48.04:63,0,48	0/1:9,0:17:16.22:16,0,63	0/1:7,0:17:18.10:18,0,63	0/1:7,0:30:68.07:309,0,68	1/1:8,0:25:2.60:401,3,0	0/1:13,0:24:8.62:9,0,190	0/1:15,0:44:50.08:50,0,289	0/1:8,1:30:99:341,0,101	0/0:28,0:27:75.26:0,75,1311	0/0:26,0:27:66.12:0,66,1094	0/1:13,0:13:42.78:43,0,307	1/1:7,2:28:2.84:26,3,0	1/1:24,0:47:6.40:43,6,0	0/1:9,0:24:72.30:72,0,103	0/1:12,0:34:77.16:77,0,155	0/1:14,1:37:97.15:100,0,97	0/1:9,0:21:6.70:7,0,159	0/1:9,0:31:99:149,0,220	0/1:5,1:26:13.84:337,0,14	0/1:3,0:8:5.67:23,0,6
chr10	55158964	.	TTG	T	3824.30	PASS	AB=0.975;AC=20;AF=0.357;AN=56;BaseQRankSum=-1.147;DP=456;FS=5.754;HRun=0;HaplotypeScore=127.5531;InbreedingCoeff=0.4386;MQ=72.01;MQ0=0;MQRankSum=-8.853;QD=17.46;ReadPosRankSum=-5.757;VQSLOD=2.0232;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,2:33:32.10:0,32,712	1/1:1,3:4:12.02:157,12,0	0/1:25,0:18:9.01:9,0,259	0/1:11,0:7:2.51:3,0,53	0/1:15,0:15:1.51:2,0,294	0/0:32,0:32:59.06:0,59,630	0/0:13,0:13:38.94:0,39,320	1/1:9,19:28:84.08:1047,84,0	0/1:14,2:16:17.88:18,0,287	0/1:14,0:14:9.09:9,0,222	0/0:10,0:10:29.82:0,30,263	0/0:16,0:16:22.65:0,23,334	0/0:11,0:11:9.87:0,10,215	0/0:14,1:15:17.77:0,18,322	0/0:16,0:16:48.05:0,48,501	0/1:12,0:12:36.01:36,0,170	0/0:29,0:29:86.24:0,86,673	0/1:10,0:10:0.90:1,0,123	1/1:5,19:24:72.11:964,72,0	1/1:3,9:12:36.08:495,36,0	1/1:3,11:14:41.98:495,42,0	0/0:16,1:17:8.72:0,9,372	0/0:16,0:16:1.14:0,1,277	0/0:4,0:4:11.99:0,12,100	0/0:11,1:12:16.73:0,17,271	0/1:18,2:20:2.87:3,0,352	1/1:2,12:14:42.11:586,42,0	0/0:13,0:13:16.69:0,17,300
chr10	55158996	.	T	TC	18312.99	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-1.298;DP=484;FS=1.787;HRun=1;HaplotypeScore=79.1258;InbreedingCoeff=0.9771;MQ=79.20;MQ0=0;MQRankSum=-7.855;QD=40.52;ReadPosRankSum=4.069;VQSLOD=5.4594;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,30:30:90.30:1348,90,0	1/1:0,6:6:18.06:260,18,0	0/0:16,0:16:39.05:0,39,487	0/0:16,0:15:35.99:0,36,420	1/1:1,22:23:60.16:853,60,0	1/1:1,29:30:78.26:1169,78,0	1/1:1,13:14:36.12:539,36,0	1/1:4,27:31:90.27:1307,90,0	1/1:1,13:14:39.08:558,39,0	1/1:0,16:16:48.16:717,48,0	1/1:0,16:16:48.16:706,48,0	1/1:1,18:19:54.17:787,54,0	1/1:1,15:16:45.15:674,45,0	1/1:0,18:18:51.17:764,51,0	1/1:0,10:10:27.09:404,27,0	1/1:0,11:11:30.10:450,30,0	1/1:4,22:25:74.96:1061,75,0	1/1:0,12:12:33.11:494,33,0	1/1:1,20:21:60.16:856,60,0	1/1:0,15:15:45.11:631,45,0	1/1:4,8:12:21.05:282,21,0	1/1:0,16:16:48.16:708,48,0	1/1:0,13:13:36.02:539,36,0	1/1:0,5:5:12.04:180,12,0	1/1:3,20:23:60.20:897,60,0	1/1:2,20:22:60.20:899,60,0	1/1:1,16:17:48.16:692,48,0	1/1:2,14:16:36.12:539,36,0
chr10	55159169	.	ATGG	A	1229.75	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=3.142;DP=407;FS=20.052;HRun=0;HaplotypeScore=91.8945;InbreedingCoeff=0.9520;MQ=75.10;MQ0=3;MQRankSum=-3.782;QD=23.20;ReadPosRankSum=0.354;VQSLOD=1.6969;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:30:75.25:0,75,1665	1/1:0,3:3:9.03:149,9,0	0/0:38,0:32:90.95:0,91,1834	0/0:29,0:24:55.73:0,56,1158	0/0:13,0:13:33.11:0,33,739	0/0:19,0:19:45.15:0,45,996	0/0:20,0:20:48.16:0,48,968	1/1:4,5:8:12.04:200,12,0	0/0:12,0:11:27.56:0,28,597	0/0:15,0:15:42.14:0,42,894	0/0:12,0:12:30.10:0,30,639	0/0:10,0:10:27.09:0,27,599	0/0:15,0:15:36.12:0,36,792	0/0:14,0:14:39.09:0,39,805	0/0:12,0:12:27.09:0,27,592	0/0:9,0:9:23.75:0,24,457	0/0:22,0:22:54.17:0,54,1141	0/0:12,0:12:33.08:0,33,662	1/1:1,6:7:18.03:271,18,0	1/1:2,11:13:18.06:287,18,0	1/1:1,12:11:24.08:400,24,0	0/0:13,0:13:39.13:0,39,866	0/0:7,0:7:18.04:0,18,356	0/0:19,0:19:45.01:0,45,977	0/0:11,0:11:33.11:0,33,738	0/0:12,0:12:33.11:0,33,727	1/1:1,7:5:5.99:100,6,0	0/0:9,0:9:21.07:0,21,457
chr10	55159334	.	T	TA	9103.88	PASS	AC=50;AF=1.000;AN=50;DP=289;FS=0.000;HRun=2;HaplotypeScore=81.9101;InbreedingCoeff=-0.0128;MQ=40.36;MQ0=0;QD=32.28;VQSLOD=4.6551;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,11:11:18.02:236,18,0	1/1:0,6:6:18.06:259,18,0	./.	./.	1/1:0,3:3:6.02:86,6,0	1/1:1,9:10:27.05:365,27,0	1/1:1,11:12:29.89:316,30,0	1/1:2,13:15:39.12:541,39,0	1/1:1,12:12:33.03:428,33,0	1/1:4,15:19:54.18:768,54,0	./.	1/1:2,18:20:54.18:767,54,0	1/1:1,16:17:45.12:624,45,0	1/1:0,14:14:38.98:470,39,0	1/1:1,17:18:35.99:448,36,0	1/1:0,12:12:33.08:452,33,0	1/1:0,9:9:21.07:301,21,0	1/1:0,6:6:18.06:259,18,0	1/1:2,7:9:24.04:322,24,0	1/1:0,8:8:18.06:259,18,0	1/1:1,5:6:9:107,9,0	1/1:0,10:10:26.96:319,27,0	1/1:0,4:4:8.94:83,9,0	1/1:0,11:11:11.95:126,12,0	1/1:2,10:12:27.05:365,27,0	1/1:2,15:17:48.16:686,48,0	1/1:1,10:9:12.04:172,12,0	1/1:0,9:9:24.08:345,24,0
chr10	55160371	.	C	CTATGTATG	3838.90	PASS	AC=16;AF=0.308;AN=52;BaseQRankSum=5.787;DP=766;FS=6.014;HRun=0;HaplotypeScore=193.7450;InbreedingCoeff=0.9291;MQ=64.82;MQ0=5;MQRankSum=-1.722;QD=17.45;ReadPosRankSum=-1.951;VQSLOD=2.0938;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:36:35.94:310,36,0	0/0:10,0:14:8.86:0,9,168	./.	./.	0/0:32,0:32:48.16:0,48,1080	0/0:23,0:23:36.11:0,36,818	0/0:25,0:25:18.06:0,18,409	0/0:29,0:29:8.95:0,9,68	0/0:26,0:26:33.10:0,33,765	0/0:38,0:37:63.21:0,63,1452	0/0:22,0:22:39.12:0,39,875	1/1:15,0:30:38.88:311,39,0	1/1:17,0:29:29.93:244,30,0	0/0:31,0:32:20.77:0,21,1012	0/0:35,0:35:63.22:0,63,1548	0/0:25,0:24:30.10:0,30,709	1/1:13,5:19:12.04:487,12,0	1/1:14,7:22:12.51:416,13,0	0/0:29,0:28:24.08:0,24,525	0/0:30,0:31:51.15:0,51,1096	0/0:29,0:29:48.16:0,48,1103	1/1:24,7:34:27.09:1062,27,0	1/1:14,7:22:15.05:582,15,0	1/1:24,4:28:12.04:428,12,0	0/0:24,0:24:36.12:0,36,823	0/0:33,0:33:45.14:0,45,998	0/0:44,0:44:69.18:0,69,1502	0/0:10,0:10:3.01:0,3,74
chr10	55160618	.	GC	G	5944.62	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=17.014;DP=740;FS=7.685;HRun=2;HaplotypeScore=91.6690;InbreedingCoeff=0.9790;MQ=80.37;MQ0=0;MQRankSum=-3.890;QD=35.38;ReadPosRankSum=-3.508;VQSLOD=3.2597;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,120,1773	1/1:0,13:13:39.13:506,39,0	0/0:21,0:21:63.21:0,63,903	0/0:16,0:16:42.11:0,42,570	0/0:24,0:24:72.24:0,72,1079	0/0:16,0:16:48.16:0,48,719	0/0:30,0:30:90.30:0,90,1349	1/1:2,28:30:84.26:1076,84,0	0/0:26,0:26:78.26:0,78,1162	0/0:38,0:38:99:0,108,1601	0/0:21,0:21:63.21:0,63,943	0/0:35,0:35:99:0,102,1500	0/0:33,0:33:99:0,99,1481	0/0:34,0:34:99:0,102,1528	0/0:35,0:35:99:0,102,1529	0/0:26,0:26:78.25:0,78,1149	0/0:28,0:28:84.25:0,84,1201	0/0:18,0:18:54.18:0,54,807	1/1:1,20:21:60.19:779,60,0	1/1:0,19:19:48.16:623,48,0	1/1:1,49:50:99:1753,135,0	0/0:22,0:22:66.22:0,66,987	0/0:22,0:22:66.22:0,66,985	0/0:28,0:28:78.26:0,78,1168	0/0:21,0:21:63.21:0,63,944	0/0:35,0:35:96.31:0,96,1419	1/1:2,33:35:93.30:1207,93,0	0/0:2,0:2:6.02:0,6,90
chr10	55162265	.	TA	T	3176.35	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=10.455;DP=469;FS=11.288;HRun=3;HaplotypeScore=61.6655;InbreedingCoeff=0.3761;MQ=73.44;MQ0=1;MQRankSum=0.057;QD=11.59;ReadPosRankSum=1.366;VQSLOD=0.7492;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:66.19:0,66,894	0/0:6,0:6:13.84:0,14,51	0/0:16,0:10:23.80:0,24,247	0/0:17,0:14:26.59:0,27,315	0/1:23,0:23:12.08:12,0,72	1/1:12,0:12:7.35:23,7,0	0/1:15,0:15:15.24:15,0,35	1/1:1,24:25:72.18:832,72,0	0/1:17,0:17:11.69:12,0,37	0/0:16,0:16:1.63:0,2,86	0/1:20,0:20:11.53:12,0,36	0/0:7,0:7:21.05:0,21,265	0/0:14,0:14:42.04:0,42,552	0/1:7,0:7:1.74:2,0,19	0/1:18,0:18:6.61:7,0,16	0/0:10,0:10:30.08:0,30,394	0/0:28,0:28:84.22:0,84,1140	0/0:21,0:21:63.19:0,63,875	1/1:2,27:29:81.09:882,81,0	1/1:0,24:24:68.91:732,69,0	1/1:0,9:9:24.08:296,24,0	0/0:9,0:9:27.09:0,27,385	0/0:21,0:21:57.07:0,57,689	0/0:5,0:5:15.01:0,15,191	0/1:15,0:15:3.47:3,0,39	0/1:19,0:19:3.55:4,0,42	1/1:2,23:25:42.13:518,42,0	0/1:16,0:16:7.49:13,0,7
chr10	55162268	.	AT	A	4477.48	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=9.876;DP=468;FS=2.768;HRun=9;HaplotypeScore=57.3227;InbreedingCoeff=0.8125;MQ=72.69;MQ0=1;MQRankSum=-0.833;QD=15.49;ReadPosRankSum=2.003;VQSLOD=5.0684;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:66.18:0,66,750	0/0:6,0:6:18.05:0,18,207	0/0:16,0:10:15.04:0,15,168	0/0:17,0:13:27.04:0,27,287	1/1:4,17:21:51.02:467,51,0	1/1:0,13:13:30.02:275,30,0	1/1:2,13:15:30.01:274,30,0	1/1:24,0:24:50.35:204,50,0	1/1:2,15:17:45.02:412,45,0	1/1:5,13:18:16.57:328,17,0	1/1:2,17:19:50.98:458,51,0	0/0:7,0:7:15.04:0,15,173	0/0:15,0:15:39.10:0,39,440	1/1:0,6:6:9:82,9,0	1/1:1,17:18:48.02:439,48,0	0/0:10,0:10:30.09:0,30,346	0/0:28,0:28:81.24:0,81,935	0/0:21,0:21:63.19:0,63,727	0/1:29,0:29:0.47:128,0,0	0/1:27,0:27:27.35:128,0,27	1/1:9,0:9:21.76:98,22,0	0/0:9,0:9:27.08:0,27,312	0/0:21,0:22:53.97:0,54,583	0/0:4,0:4:12.04:0,12,138	1/1:2,13:15:30.02:275,30,0	1/1:1,18:19:54.02:491,54,0	0/1:25,0:25:6.22:117,0,6	1/1:1,13:14:33.02:302,33,0
chr10	55162383	.	C	CT	2746.60	PASS	AB=0.574;AC=17;AF=0.304;AN=56;BaseQRankSum=-7.904;DP=423;FS=0.435;HRun=9;HaplotypeScore=43.0398;InbreedingCoeff=0.7318;MQ=76.41;MQ0=0;MQRankSum=1.579;QD=19.62;ReadPosRankSum=-1.575;VQSLOD=2.9525;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:38.96:0,39,339	0/0:8,0:8:20.99:0,21,182	0/0:16,0:17:12.04:0,12,168	0/0:17,0:13:20.14:0,20,197	0/0:21,0:21:56.99:0,57,495	0/0:17,0:17:47.99:0,48,417	0/0:6,0:6:18:0,18,156	1/1:11,14:25:43.47:467,43,0	0/0:16,0:16:35.99:0,36,312	0/0:15,0:15:41.93:0,42,357	0/0:23,0:23:53.97:0,54,469	1/1:1,3:4:6.02:66,6,0	0/1:4,6:10:14.02:88,0,14	0/0:10,0:10:20.98:0,21,182	0/0:19,0:19:53.98:0,54,468	0/0:17,0:17:41.97:0,42,365	0/0:19,0:19:53.99:0,54,469	0/0:13,0:13:32.99:0,33,286	1/1:3,12:15:34.91:369,35,0	0/1:4,18:22:22.59:415,0,23	1/1:2,3:5:9.02:100,9,0	1/1:2,12:15:15.88:378,16,0	1/1:4,8:13:26.90:276,27,0	1/1:0,14:14:36.10:398,36,0	0/0:17,0:17:44.98:0,45,390	0/0:16,0:17:47.03:0,47,397	0/1:3,14:17:5.51:386,0,6	0/0:13,0:13:32.98:0,33,286
chr10	55162557	.	GGT	G	871.33	PASS	AB=0.921;AC=34;AF=0.680;AN=50;BaseQRankSum=0.901;DP=647;FS=5.842;HRun=0;HaplotypeScore=97.9532;InbreedingCoeff=0.0392;MQ=62.13;MQ0=12;MQRankSum=-1.575;QD=1.84;ReadPosRankSum=1.889;VQSLOD=1.5486;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:30:0.47:1,0,0	0/0:4,0:4:2.98:0,3,22	./.	./.	1/1:11,3:17:20.39:153,20,0	0/0:14,0:14:8.98:0,9,73	0/1:28,3:29:29.20:114,0,29	0/0:32,0:32:2.97:0,3,20	1/1:12,1:16:8.85:78,9,0	1/1:19,1:20:3.01:32,3,0	1/1:15,0:15:3:28,3,0	1/1:20,0:24:8.52:42,9,0	1/1:24,0:25:5.64:27,6,0	0/1:16,3:18:12.09:85,0,12	0/1:21,3:24:26.35:125,0,26	1/1:18,0:22:14.20:70,14,0	1/1:14,0:25:6.15:29,6,0	0/1:12,0:12:7.99:8,0,32	0/1:28,0:25:20.22:20,0,79	0/1:19,0:18:21.64:26,0,22	0/1:54,0:54:8.27:8,0,173	./.	1/1:13,0:15:2.84:14,3,0	1/1:22,0:28:2.84:14,3,0	0/1:12,5:16:35.18:55,0,35	1/1:20,0:21:2.80:14,3,0	0/0:22,0:21:12:0,12,107	1/1:7,1:9:8.85:76,9,0
chr10	55162604	.	G	GTT	2646.50	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=-1.202;DP=589;FS=9.922;HRun=2;HaplotypeScore=99.2637;InbreedingCoeff=0.8892;MQ=57.92;MQ0=21;MQRankSum=0.724;QD=17.64;ReadPosRankSum=-2.793;VQSLOD=-0.3379;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:34:56.31:0,56,435	1/1:5,0:5:10.79:81,11,0	0/0:32,0:12:30.06:0,30,312	0/0:28,0:17:34.72:0,35,328	0/0:12,0:12:29.89:0,30,252	0/1:17,0:17:25.10:25,0,100	0/0:29,0:27:76.72:0,77,626	1/1:26,0:25:63.03:586,63,0	0/0:23,0:23:50.26:0,50,386	0/0:18,0:18:47.98:0,48,429	0/0:16,0:16:32.93:0,33,267	0/0:20,0:20:44.55:0,45,339	0/0:16,0:14:30.80:0,31,235	0/0:15,0:14:18.36:0,18,244	0/0:25,0:25:53.78:0,54,426	0/0:24,0:22:65.58:0,66,517	0/0:18,0:18:29.73:0,30,218	0/0:19,0:18:40.71:0,41,280	1/1:22,0:22:62.56:553,63,0	1/1:2,8:8:26.77:219,27,0	1/1:52,3:53:99:1047,112,0	0/0:14,0:14:26.89:0,27,210	0/0:16,0:15:38.91:0,39,312	0/0:26,0:28:38.78:0,39,312	0/0:18,0:17:38.97:0,39,346	0/0:21,0:21:59.86:0,60,495	1/1:14,0:15:32.58:324,33,0	0/0:9,0:9:23.64:0,24,183
chr10	55162756	.	GCAGGT	G	4560.05	PASS	AB=0.780;AC=14;AF=0.250;AN=56;BaseQRankSum=16.852;DP=1143;FS=1.401;HRun=0;HaplotypeScore=464.5003;InbreedingCoeff=-0.3337;MQ=50.45;MQ0=6;MQRankSum=-16.189;QD=7.26;ReadPosRankSum=5.880;VQSLOD=1.2850;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,157,5143	0/0:8,0:8:24.08:0,24,776	0/0:57,0:39:99:0,111,2932	0/0:64,0:47:99:0,132,3681	0/0:32,9:41:32.58:0,33,819	0/1:20,7:27:99:290,0,304	0/1:29,13:42:99:308,0,764	0/0:41,0:41:99:0,114,3705	0/1:29,11:40:99:409,0,372	0/1:52,9:61:99:495,0,1430	0/1:18,14:32:99:139,0,204	0/1:43,11:54:99:369,0,398	0/1:34,10:44:99:244,0,460	0/1:33,14:47:99:260,0,456	0/1:28,20:49:99:448,0,190	0/0:25,0:25:75.26:0,75,2452	0/0:28,0:28:81.28:0,81,2603	0/0:30,0:30:90.31:0,90,2948	0/0:12,0:12:36.12:0,36,1155	0/0:18,0:18:54.19:0,54,1727	0/0:77,0:77:99:0,220,7015	0/1:33,15:48:97.70:98,0,523	0/1:32,21:54:99:155,0,434	0/0:27,5:31:20.84:0,21,454	0/1:29,7:36:99:184,0,784	0/1:60,14:74:99:906,0,1289	0/0:24,0:24:72.25:0,72,2307	0/1:13,7:20:99:255,0,452
chr10	55162759	.	GGTGTAT	G	9826.76	PASS	AB=0.960;AC=23;AF=0.411;AN=56;BaseQRankSum=20.852;DP=1136;FS=5.628;HRun=0;HaplotypeScore=456.3697;InbreedingCoeff=0.3990;MQ=49.23;MQ0=6;MQRankSum=-16.729;QD=14.18;ReadPosRankSum=5.011;VQSLOD=2.0101;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:57:99:0,156,5107	0/0:9,0:9:27.09:0,27,907	0/0:53,0:34:76.73:0,77,2197	0/0:63,0:45:99:0,122,3195	0/1:39,2:41:39.09:315,0,39	1/1:24,3:27:29.83:711,30,0	0/1:38,1:39:47.17:429,0,47	0/0:45,0:45:99:0,120,3218	0/1:38,0:38:2.19:414,0,2	1/1:56,2:58:63.62:1689,64,0	0/1:29,3:32:1.44:195,0,1	1/1:57,0:57:15.08:398,15,0	0/1:41,2:43:30.79:364,0,31	0/1:47,1:48:47.33:361,0,47	1/1:51,0:51:61.73:880,62,0	0/0:28,0:28:84.27:0,84,2757	0/0:27,0:27:78.20:0,78,2495	0/0:29,0:29:87.24:0,87,2766	0/0:14,0:14:42.08:0,42,1152	0/0:17,0:17:51.13:0,51,1546	0/0:76,0:76:99:0,199,6181	1/1:43,3:46:0.86:368,1,0	0/1:49,2:52:7.53:341,0,8	0/1:30,3:32:8.07:103,0,8	1/1:34,1:35:77.79:1029,78,0	0/1:72,1:73:6.52:1577,0,7	0/0:24,0:24:69.22:0,69,2191	1/1:19,1:20:26.32:652,26,0
chr10	55162763	.	T	TGTGC	5979.84	PASS	AB=0.951;AC=17;AF=0.304;AN=56;BaseQRankSum=18.371;DP=1114;FS=2.069;HRun=0;HaplotypeScore=442.0791;InbreedingCoeff=-0.1925;MQ=48.48;MQ0=5;MQRankSum=-17.654;QD=9.06;ReadPosRankSum=3.938;VQSLOD=2.3445;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,154,3108	0/0:9,0:9:27.09:0,27,565	0/0:60,0:37:97.41:0,97,1737	0/0:64,0:48:99:0,135,2378	0/1:36,2:39:63.29:63,0,357	0/1:24,2:26:99:300,0,136	0/1:32,5:37:79.92:377,0,80	0/0:43,0:43:99:0,126,2276	0/1:35,1:36:74.19:354,0,74	0/1:49,5:54:99:786,0,622	0/1:29,1:31:4.26:110,0,4	0/1:51,2:53:2.64:408,0,3	0/1:40,1:41:99:318,0,142	0/1:46,2:48:89.45:303,0,89	1/1:48,1:49:17.11:691,17,0	0/0:30,0:30:90.29:0,90,1812	0/0:28,0:28:81.22:0,81,1597	0/0:30,0:30:90.21:0,90,1750	0/0:17,0:17:45.12:0,45,850	0/0:18,0:18:54.14:0,54,1011	0/0:75,0:75:99:0,211,4126	0/1:41,1:42:95.59:169,0,96	0/1:48,1:50:59.59:201,0,60	0/1:28,2:29:82.56:102,0,83	0/1:33,0:33:99:260,0,334	0/1:62,9:71:99:1328,0,686	0/0:24,0:24:72.23:0,72,1446	0/1:20,0:20:99:210,0,409
chr10	55162764	.	ATGTGTG	A	10466.27	PASS	AB=0.945;AC=29;AF=0.518;AN=56;BaseQRankSum=19.200;DP=1107;FS=3.205;HRun=0;HaplotypeScore=447.8046;InbreedingCoeff=0.7607;MQ=47.27;MQ0=5;MQRankSum=-15.546;QD=15.91;ReadPosRankSum=3.564;VQSLOD=2.1057;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:59,0:59:99:0,154,5167	0/0:9,0:9:27.09:0,27,877	0/0:58,0:36:73.02:0,73,2228	0/0:63,0:47:99:0,120,3208	1/1:36,3:39:26.89:478,27,0	1/1:24,1:25:38.76:688,39,0	0/1:37,1:38:43.82:350,0,44	0/0:41,0:41:99:0,102,3056	1/1:36,0:36:38.11:301,38,0	1/1:36,18:54:99:2171,129,0	1/1:27,4:31:2.73:84,3,0	1/1:53,0:53:35.33:317,35,0	1/1:41,0:41:37.95:401,38,0	0/1:45,0:45:8.04:277,0,8	1/1:49,0:49:47.07:666,47,0	0/0:30,0:30:87.30:0,87,2833	0/0:28,0:28:75.26:0,75,2515	0/0:29,0:29:84.29:0,84,2680	0/0:17,0:17:45.14:0,45,1281	0/0:17,0:17:45.15:0,45,1492	0/0:71,0:73:99:0,199,6144	1/1:33,9:42:9.22:336,9,0	0/1:42,8:50:26.11:282,0,26	1/1:31,0:30:15.50:152,16,0	1/1:31,1:32:79.73:1168,80,0	1/1:71,0:71:42.03:1898,42,0	0/0:24,0:24:69.20:0,69,2190	1/1:20,1:21:56.92:898,57,0
chr10	55162765	.	T	TGTGTATGGTATGCAG	45488.74	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=14.753;DP=1179;FS=0.555;HRun=0;HaplotypeScore=520.7263;InbreedingCoeff=0.9989;MQ=46.98;MQ0=6;MQRankSum=-17.416;QD=62.74;ReadPosRankSum=1.552;VQSLOD=4.0085;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:59,0:59:99:0,153,6184	0/0:9,0:9:27.09:0,27,1045	0/0:60,0:36:84.59:0,85,2246	0/0:65,0:50:99:0,120,3341	1/1:30,0:39:25.47:688,25,0	1/1:19,0:26:60.07:2805,60,0	1/1:28,0:41:54.97:2016,55,0	0/0:42,0:42:99:0,102,3348	1/1:8,17:44:51.17:2789,51,0	1/1:46,0:55:99:6366,129,0	1/1:17,0:31:27.48:848,27,0	1/1:12,27:63:57.15:3117,57,0	1/1:13,17:50:57.12:2834,57,0	1/1:10,18:53:51.58:2427,52,0	1/1:5,22:55:69.71:3286,70,0	0/0:30,0:30:87.30:0,87,3421	0/0:28,0:28:75.24:0,75,3006	0/0:29,0:29:84.29:0,84,3294	0/0:17,0:17:45.15:0,45,1599	0/0:16,0:16:45.15:0,45,1770	0/0:73,0:73:99:0,199,7392	1/1:27,0:42:21.05:1246,21,0	1/1:32,0:52:38.98:1313,39,0	1/1:32,0:36:39.92:1076,40,0	1/1:27,0:34:66.37:3558,66,0	1/1:19,34:81:99:8455,186,0	0/0:24,0:24:69.20:0,69,2657	1/1:14,0:21:57.12:2666,57,0
chr10	55162794	.	GT	G	291.34	PASS	AB=0.753;AC=2;AF=0.036;AN=56;BaseQRankSum=7.883;DP=937;FS=2.804;HRun=1;HaplotypeScore=298.2421;InbreedingCoeff=-0.0373;MQ=61.44;MQ0=2;MQRankSum=-5.697;QD=5.95;ReadPosRankSum=-2.049;VQSLOD=-0.5069;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:65,0:65:99:0,184,2876	0/0:8,0:8:24.08:0,24,374	0/0:47,0:33:87.63:0,88,1248	0/0:42,0:39:81.78:0,82,1547	0/0:19,8:27:30.09:0,30,453	0/0:22,8:30:50.32:0,50,754	0/0:21,7:28:21.54:0,22,459	0/0:51,0:51:99:0,147,2301	0/0:28,0:27:48.16:0,48,766	0/1:22,13:35:99:312,0,648	0/0:26,6:32:42.10:0,42,670	0/0:44,0:44:59.23:0,59,923	0/0:35,1:35:52.99:0,53,820	0/0:41,0:41:63.03:0,63,997	0/0:32,0:32:51.17:0,51,810	0/0:30,0:30:87.28:0,87,1351	0/0:34,0:34:99:0,102,1611	0/0:21,0:21:63.21:0,63,1007	0/0:26,0:26:75.20:0,75,1117	0/0:17,0:17:48.15:0,48,734	0/0:52,0:52:99:0,150,2298	0/0:22,10:32:39.26:0,39,591	0/0:32,12:43:41.45:0,41,617	0/0:24,9:32:35.39:0,35,535	0/0:9,15:24:28.36:0,28,365	0/0:45,0:45:99:0,104,1669	0/0:19,0:19:57.19:0,57,895	0/1:10,4:14:68.47:68,0,245
chr10	55163709	.	TTTA	T	793.55	PASS	AB=0.980;AC=10;AF=0.217;AN=46;BaseQRankSum=2.946;DP=241;FS=0.897;HRun=0;HaplotypeScore=39.8788;InbreedingCoeff=0.4542;MQ=76.28;MQ0=1;MQRankSum=2.085;QD=9.02;ReadPosRankSum=1.563;VQSLOD=2.2765;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,8:15:21.02:280,21,0	0/0:3,0:3:6.02:0,6,112	./.	./.	0/0:7,0:11:12.04:0,12,149	0/0:9,0:10:9.03:0,9,114	0/0:3,0:4:5.96:0,6,53	0/1:23,1:24:15.98:16,0,313	./.	0/0:6,0:7:3.01:0,3,39	0/0:6,0:6:5.93:0,6,53	0/0:5,0:5:9.03:0,9,174	0/0:5,0:5:3.01:0,3,58	0/0:2,0:4:9.03:0,9,115	0/0:5,0:7:6.02:0,6,75	1/1:2,0:5:5.95:42,6,0	1/1:9,12:22:21.03:261,21,0	1/1:3,11:14:24.08:320,24,0	0/0:13,0:13:12.04:0,12,214	0/0:10,0:10:12.04:0,12,232	0/1:7,0:7:19.77:20,0,228	./.	./.	0/0:1,0:1:3.01:0,3,58	0/0:2,0:4:6.02:0,6,74	0/0:8,0:8:12.04:0,12,147	0/0:12,0:12:6.02:0,6,116	0/0:8,0:11:18.06:0,18,233
chr10	55165619	.	T	TA	318.85	PASS	AB=0.600;AC=9;AF=0.167;AN=54;BaseQRankSum=7.405;DP=437;FS=0.000;HRun=1;HaplotypeScore=74.2406;InbreedingCoeff=0.8291;MQ=57.11;MQ0=18;MQRankSum=-7.224;QD=6.02;ReadPosRankSum=0.188;VQSLOD=0.2627;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:17:39.13:0,39,505	0/1:3,6:8:4.12:73,0,4	0/0:23,0:17:41.87:0,42,517	0/0:27,0:20:51.12:0,51,613	0/0:8,0:7:9.03:0,9,111	0/0:16,0:16:36.11:0,36,444	0/0:21,0:18:42.06:0,42,498	0/0:22,0:9:21.07:0,21,260	0/0:19,0:19:54.11:0,54,644	0/0:10,0:9:24.05:0,24,273	0/0:2,0:2:6.02:0,6,74	1/1:4,7:7:17.28:115,17,0	1/1:4,15:19:29.14:169,29,0	0/0:19,0:18:43.61:0,44,491	0/0:26,0:26:72.23:0,72,886	0/0:20,0:20:53.97:0,54,627	0/0:27,0:27:75.24:0,75,974	0/0:16,0:16:45.15:0,45,580	0/0:19,0:14:39.12:0,39,484	0/0:11,0:11:24.08:0,24,295	0/0:29,0:25:63.14:0,63,745	1/1:3,4:7:8.59:44,9,0	1/1:2,5:7:14.29:74,14,0	./.	0/0:10,0:9:12.04:0,12,143	0/0:13,0:13:33.10:0,33,401	0/0:22,0:22:63.20:0,63,776	0/0:4,0:4:12.04:0,12,148
chr10	55166150	.	AG	A	4192.70	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=9.833;DP=634;FS=5.157;HRun=1;HaplotypeScore=117.7194;InbreedingCoeff=0.9872;MQ=88.00;MQ0=0;MQRankSum=-5.121;QD=38.12;ReadPosRankSum=-0.904;VQSLOD=2.9424;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,134,787	1/1:0,11:11:33.11:461,33,0	0/0:28,0:28:78.55:0,79,1276	0/0:28,0:28:84.25:0,84,1296	0/0:32,0:32:85.44:0,85,499	0/0:25,0:25:20.45:0,20,325	0/0:26,0:26:48.52:0,49,385	0/0:36,0:36:70.51:0,71,468	0/0:10,0:10:28.96:0,29,169	0/0:21,0:21:32.29:0,32,269	0/0:12,0:12:34.61:0,35,187	1/1:0,12:12:33.11:462,33,0	1/1:0,12:12:33.11:462,33,0	0/0:15,0:15:18.83:0,19,219	0/0:19,0:19:27.36:0,27,267	0/0:20,0:20:33.13:0,33,288	0/0:32,0:32:63.66:0,64,470	0/0:10,0:10:29.11:0,29,169	0/0:23,0:23:66.45:0,66,379	0/0:21,0:21:46.41:0,46,282	0/0:29,0:29:48.52:0,49,384	1/1:0,30:30:84.28:1175,84,0	1/1:0,19:19:51.17:714,51,0	1/1:0,26:25:66.22:920,66,0	0/0:25,0:25:42.40:0,42,329	0/0:23,0:23:11.04:0,11,276	0/0:28,0:27:75.13:0,75,437	0/0:14,0:14:17.10:0,17,205
chr10	55166253	.	CT	C	3928.24	PASS	AB=0.934;AC=25;AF=0.446;AN=56;BaseQRankSum=4.069;DP=592;FS=0.703;HRun=12;HaplotypeScore=133.1571;InbreedingCoeff=0.7790;MQ=66.35;MQ0=0;MQRankSum=-11.593;QD=13.23;ReadPosRankSum=2.423;VQSLOD=2.7993;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:29:60.39:0,60,592	0/0:9,0:9:21.03:0,21,207	0/1:23,3:23:10.14:10,0,270	0/1:13,0:10:40.24:40,0,96	1/1:7,20:28:61.67:462,62,0	1/1:8,14:23:22.57:304,23,0	1/1:5,13:19:43.85:329,44,0	0/0:25,0:25:63.10:0,63,627	1/1:3,20:23:59.76:464,60,0	1/1:10,9:19:29.47:214,29,0	1/1:7,11:19:25.44:305,25,0	0/0:16,0:16:30.04:0,30,295	0/0:17,1:18:18.87:0,19,365	1/1:7,13:21:49.83:376,50,0	1/1:11,14:25:50.71:388,51,0	0/0:7,0:20:46.67:0,47,262	0/0:30,0:30:81.04:0,81,801	0/0:17,0:19:38.88:0,39,365	0/1:17,2:19:4.31:4,0,318	0/0:24,1:25:39.87:0,40,573	0/0:14,1:15:9.79:0,10,264	0/0:25,0:25:60.04:0,60,575	0/0:20,2:22:3.96:0,4,430	0/0:12,0:13:32.88:0,33,308	1/1:9,20:29:40.66:447,41,0	1/1:5,16:21:53.60:405,54,0	0/0:29,0:29:63.36:0,63,754	1/1:4,8:12:23.85:181,24,0
chr10	55166287	.	T	TAA	27574.64	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-2.573;DP=618;FS=7.813;HRun=0;HaplotypeScore=95.2201;InbreedingCoeff=0.9994;MQ=72.54;MQ0=1;MQRankSum=-6.399;QD=55.93;ReadPosRankSum=2.546;VQSLOD=4.6631;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:81.28:0,81,1321	1/1:1,10:11:33.11:665,33,0	0/0:29,0:25:60.09:0,60,897	0/0:22,0:19:39.21:0,39,590	1/1:0,32:32:96.33:1947,96,0	1/1:4,23:28:69.04:1352,69,0	1/1:1,15:16:48.16:974,48,0	1/1:0,25:26:78.25:1539,78,0	1/1:1,18:19:54.19:1094,54,0	1/1:3,15:18:51.15:989,51,0	1/1:2,19:21:57.20:1149,57,0	1/1:0,21:22:48.16:969,48,0	1/1:2,13:15:42.14:848,42,0	1/1:0,21:21:60.21:1217,60,0	1/1:1,21:22:66.23:1334,66,0	1/1:2,20:22:63.20:1235,63,0	0/0:30,0:30:90.29:0,90,1444	0/0:17,0:17:51.15:0,51,796	1/1:3,23:26:78.26:1551,78,0	1/1:0,25:27:75.22:1462,75,0	1/1:1,12:13:36.12:724,36,0	1/1:1,22:23:63.17:1239,63,0	1/1:0,25:26:66.12:1337,66,0	1/1:0,9:9:24.08:488,24,0	1/1:3,24:27:75.26:1506,75,0	1/1:0,22:22:66.23:1339,66,0	1/1:0,29:29:78.27:1583,78,0	1/1:0,17:18:51.18:1035,51,0
chr10	55166679	.	C	CGTCTGTA	484.24	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=0.071;DP=662;FS=3.888;HRun=0;HaplotypeScore=163.7502;InbreedingCoeff=0.9824;MQ=83.30;MQ0=0;MQRankSum=-4.130;QD=53.80;ReadPosRankSum=-0.009;VQSLOD=3.6679;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,117,2791	1/1:4,4:9:15.05:573,15,0	0/0:18,0:18:33.10:0,33,685	0/0:23,0:22:45.15:0,45,1015	0/0:25,0:25:57.20:0,57,1347	0/0:17,0:17:42.10:0,42,976	0/0:28,0:28:66.23:0,66,1617	0/0:27,0:27:60.20:0,60,1321	0/0:16,0:16:39.13:0,39,955	0/0:28,0:28:66.18:0,66,1471	0/0:19,0:19:45.15:0,45,1089	0/0:15,0:15:27.09:0,27,662	0/0:26,0:26:66.21:0,66,1543	0/0:18,0:18:45.14:0,45,1047	0/0:28,0:28:66.23:0,66,1575	0/0:13,0:13:36.12:0,36,882	0/0:31,0:31:55.26:0,55,1684	0/0:21,0:21:47.48:0,47,1020	0/0:18,0:18:39.13:0,39,906	0/0:25,0:25:63.20:0,63,1432	0/0:46,0:46:99:0,102,2373	0/0:29,0:29:84.19:0,84,1902	0/0:25,0:25:57.20:0,57,1384	0/0:34,0:34:93.32:0,93,2249	0/0:19,0:19:48.16:0,48,1176	0/0:22,0:22:54.19:0,54,1300	0/0:17,0:17:51.17:0,51,1208	0/0:20,0:20:51.17:0,51,1249
chr10	55166790	.	G	GTTTTTT	3991.18	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=4.632;DP=546;FS=40.576;HRun=0;HaplotypeScore=155.0893;InbreedingCoeff=0.5795;MQ=78.15;MQ0=7;MQRankSum=-8.439;QD=31.43;ReadPosRankSum=-1.956;VQSLOD=1.5354;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,114,2348	0/1:5,0:8:6.57:216,0,7	0/0:46,0:26:65.30:0,65,1059	0/0:36,0:23:38.78:0,39,560	0/0:24,0:24:63.15:0,63,949	0/0:19,0:19:54.15:0,54,885	0/0:10,0:9:24.05:0,24,343	0/0:35,0:34:31.29:0,31,856	0/0:9,0:9:21.07:0,21,362	0/0:22,0:22:66.15:0,66,1070	0/0:23,0:23:60.17:0,60,940	1/1:5,5:10:30.06:666,30,0	1/1:9,4:14:42:726,42,0	0/0:16,0:16:45.14:0,45,788	0/0:16,0:16:42.12:0,42,722	0/0:19,0:19:57.19:0,57,1325	0/0:20,0:20:60.19:0,60,1368	0/0:28,0:28:81.25:0,81,1854	0/1:18,0:18:58.28:58,0,391	0/1:13,0:13:17.82:18,0,345	0/1:13,0:13:37.50:37,0,377	1/1:7,5:12:36.04:718,36,0	1/1:6,9:15:45.12:1124,45,0	1/1:5,3:8:24.04:422,24,0	0/0:19,0:19:51.15:0,51,818	0/0:24,0:24:69.19:0,69,1119	0/1:16,0:16:5.69:6,0,444	0/0:11,0:11:26.81:0,27,439
chr10	55166791	.	G	GT	4804.82	PASS	AB=0.892;AC=30;AF=0.536;AN=56;BaseQRankSum=-7.824;DP=563;FS=31.333;HRun=9;HaplotypeScore=104.6619;InbreedingCoeff=0.3631;MQ=77.03;MQ0=8;MQRankSum=-0.611;QD=13.38;ReadPosRankSum=3.918;VQSLOD=2.7989;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:86.88:0,87,738	1/1:8,0:8:1.82:25,2,0	0/1:53,0:28:11.05:11,0,165	0/1:47,0:23:5.94:6,0,139	1/1:3,22:25:54.07:571,54,0	0/1:4,13:17:9.98:356,0,10	1/1:2,7:8:18.05:199,18,0	0/0:35,0:34:18.02:0,18,164	1/1:0,9:9:21.06:232,21,0	1/1:4,17:22:47.18:557,47,0	1/1:2,21:24:54.15:597,54,0	0/1:10,0:10:30.44:30,0,36	0/1:12,0:12:29.42:29,0,37	0/1:4,13:17:9.97:356,0,10	1/1:2,14:16:13.06:372,13,0	0/0:18,1:19:17.81:0,18,383	0/0:21,0:21:53.93:0,54,458	0/0:29,0:29:68.67:0,69,590	0/0:18,0:18:0.47:0,0,60	0/0:13,0:13:23.80:0,24,98	0/0:13,0:13:25.99:0,26,101	0/1:12,0:12:30.74:31,0,33	0/1:15,0:15:25.45:61,0,25	1/1:8,0:8:2.27:27,2,0	1/1:2,16:20:47.80:493,48,0	1/1:4,19:23:31.07:552,31,0	0/0:16,0:16:29.79:0,30,140	1/1:0,12:12:27.07:299,27,0
chr10	55166794	.	T	TG	445.64	PASS	AB=0.969;AC=14;AF=0.250;AN=56;BaseQRankSum=3.132;DP=589;FS=8.680;HRun=0;HaplotypeScore=137.9444;InbreedingCoeff=0.0125;MQ=76.57;MQ0=8;MQRankSum=-3.519;QD=2.06;ReadPosRankSum=8.739;VQSLOD=1.0175;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,114,1439	0/0:8,0:8:11.52:0,12,74	0/0:56,0:29:46.52:0,47,570	0/0:50,0:25:27.99:0,28,348	0/1:24,0:24:41.91:75,0,42	0/1:19,0:19:34.42:34,0,145	0/1:9,0:8:29.09:29,0,33	0/0:39,0:38:97.10:0,97,1071	1/1:9,0:9:14.96:62,15,0	0/1:22,0:22:47.32:61,0,47	0/1:25,0:25:73.41:73,0,78	0/0:10,5:15:4.83:0,5,139	0/0:10,5:15:9.42:0,9,171	0/1:17,0:17:37.29:37,0,99	0/1:15,0:15:15.82:42,0,16	0/0:20,0:20:53.01:0,53,745	0/0:23,0:23:66.17:0,66,853	0/0:29,0:29:68.79:0,69,993	0/0:17,0:17:48.99:0,49,518	0/0:11,0:11:33.08:0,33,366	0/0:11,0:11:33.09:0,33,386	0/0:8,5:13:17.53:0,18,168	0/1:11,9:20:10.74:11,0,108	0/0:6,3:9:3.49:0,3,69	0/1:20,0:20:39.35:51,0,39	0/1:23,0:23:71.87:72,0,97	0/0:15,0:15:45.10:0,45,506	1/1:13,0:13:19.22:63,19,0
chr10	55166797	.	T	TG	1276.63	PASS	AB=1.000;AC=22;AF=0.393;AN=56;BaseQRankSum=7.014;DP=590;FS=22.488;HRun=0;HaplotypeScore=125.2809;InbreedingCoeff=0.2771;MQ=75.53;MQ0=9;MQRankSum=-4.288;QD=4.75;ReadPosRankSum=7.393;VQSLOD=1.5392;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,103,1336	0/0:8,0:8:11.30:0,11,68	0/0:56,0:28:34.45:0,34,440	0/0:52,0:25:19.43:0,19,277	0/1:23,0:23:16.59:87,0,17	0/1:19,0:19:37.62:38,0,110	0/1:9,0:8:28.30:28,0,34	0/0:43,0:42:99:0,108,1164	1/1:9,0:9:14.46:45,14,0	0/1:21,0:21:61.52:62,0,62	0/1:24,0:24:68.43:73,0,68	1/1:11,5:15:34.60:214,35,0	1/1:11,5:16:29.11:181,29,0	0/1:16,0:16:36.18:36,0,78	0/1:16,0:16:36.09:36,0,40	0/0:20,0:20:50:0,50,716	0/0:25,0:25:75.13:0,75,921	0/0:30,0:30:84.14:0,84,1066	0/0:16,0:16:45.98:0,46,479	0/0:10,0:10:30.08:0,30,347	0/0:10,0:10:30.09:0,30,359	1/1:7,5:12:16.17:118,16,0	1/1:14,9:23:34.21:250,34,0	1/1:4,3:7:20.55:127,21,0	0/1:21,0:21:44.96:50,0,45	0/1:24,0:24:85.07:85,0,94	0/0:12,0:12:36.10:0,36,429	0/1:13,0:13:1.66:41,0,2
chr10	55166811	.	GAT	G	288.98	PASS	AB=0.901;AC=7;AF=0.125;AN=56;BaseQRankSum=7.445;DP=572;FS=17.428;HRun=0;HaplotypeScore=128.2696;InbreedingCoeff=0.5959;MQ=67.93;MQ0=10;MQRankSum=-6.986;QD=4.31;ReadPosRankSum=-2.958;VQSLOD=1.2469;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,123,2302	1/1:2,6:9:8.87:72,9,0	0/0:49,0:19:41.30:0,41,505	0/0:54,0:25:21.34:0,21,413	0/0:21,0:21:60.12:0,60,1142	0/0:19,0:19:57.20:0,57,1150	0/0:10,0:9:27.08:0,27,506	0/0:29,0:28:84.25:0,84,1627	0/0:10,0:10:30.10:0,30,597	0/0:20,0:20:59.92:0,60,1057	0/0:23,0:23:69.19:0,69,1289	0/1:11,0:11:8.27:13,0,8	0/1:11,0:12:9.12:58,0,9	0/0:15,0:15:45.14:0,45,858	0/0:14,0:14:39.13:0,39,777	0/0:17,0:17:51.16:0,51,996	0/0:28,0:28:81.28:0,81,1619	0/0:30,0:30:65.05:0,65,1493	0/0:15,0:14:42.07:0,42,698	0/0:10,0:10:29.87:0,30,493	0/0:15,0:15:45.12:0,45,830	0/1:10,0:12:0.74:75,0,1	1/1:19,0:22:8.49:201,8,0	0/0:5,0:6:8.60:0,9,23	0/0:24,0:24:69.22:0,69,1355	0/0:23,0:23:69.23:0,69,1359	0/0:13,0:13:38.32:0,38,647	0/0:16,0:16:39.09:0,39,691
chr10	55166814	.	T	TTG	2374.79	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=11.942;DP=579;FS=27.484;HRun=0;HaplotypeScore=122.2865;InbreedingCoeff=0.9680;MQ=67.73;MQ0=10;MQRankSum=-11.603;QD=32.09;ReadPosRankSum=0.932;VQSLOD=2.7130;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,120,1749	1/1:9,0:9:5.90:44,6,0	0/0:49,0:19:30.15:0,30,324	0/0:54,0:24:11.15:0,11,294	0/0:22,0:22:57.14:0,57,844	0/0:20,0:20:57.19:0,57,872	0/0:11,0:10:30.06:0,30,414	0/0:30,0:29:87.25:0,87,1268	0/0:10,0:10:30.10:0,30,459	0/0:19,0:19:57.17:0,57,799	0/0:23,0:23:69.21:0,69,996	1/1:2,10:12:27.98:473,28,0	1/1:3,9:12:35.98:516,36,0	0/0:15,0:15:42.13:0,42,622	0/0:14,0:14:39.13:0,39,596	0/0:18,0:18:54.17:0,54,788	0/0:27,0:27:81.28:0,81,1236	0/0:31,0:31:82.83:0,83,1183	0/0:14,0:13:36.05:0,36,466	0/0:10,0:10:30.08:0,30,418	0/0:15,0:15:45.13:0,45,631	1/1:4,8:12:31.24:479,31,0	1/1:6,16:22:55.56:768,56,0	1/1:1,5:6:17.99:278,18,0	0/0:24,0:24:69.23:0,69,1036	0/0:23,0:23:69.23:0,69,1036	0/0:12,0:12:36.10:0,36,503	0/0:20,0:20:42.09:0,42,563
chr10	55166989	.	T	TC	1932.15	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=-4.279;DP=452;FS=0.000;HRun=9;HaplotypeScore=105.4816;InbreedingCoeff=0.9114;MQ=72.79;MQ0=1;MQRankSum=-1.312;QD=12.63;ReadPosRankSum=-0.375;VQSLOD=3.1345;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:12,11:23:13:356,13,0	0/0:4,0:4:8.98:0,9,78	0/0:17,0:18:14.15:0,14,216	0/0:18,0:17:12.89:0,13,176	0/0:18,0:19:38.02:0,38,318	0/0:15,0:15:35.99:0,36,312	0/0:18,0:18:47.99:0,48,417	1/1:4,0:13:23.11:131,23,0	0/0:21,0:21:44.96:0,45,390	0/0:16,0:16:2.81:0,3,252	0/0:20,0:20:32.98:0,33,286	0/0:14,0:13:29.99:0,30,260	0/0:10,0:10:26.99:0,27,234	0/0:10,0:10:26.97:0,27,228	0/0:12,0:13:26:0,26,214	1/1:1,14:15:33.09:362,33,0	1/1:9,20:29:39.11:431,39,0	1/1:6,14:22:30.60:508,31,0	1/1:7,0:11:14.35:80,14,0	0/1:3,0:3:0:0,0,0	1/1:7,1:19:14.97:96,15,0	0/0:16,0:16:44.99:0,45,390	0/0:14,0:14:29.99:0,30,260	0/0:20,0:20:32.61:0,33,274	0/0:22,0:22:47.98:0,48,414	0/0:21,0:21:50.97:0,51,443	1/1:4,0:17:34.05:169,34,0	0/0:7,0:7:12:0,12,104
chr10	55167026	.	A	AT	4038.36	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=1.703;DP=470;FS=2.894;HRun=8;HaplotypeScore=145.1853;InbreedingCoeff=0.9197;MQ=62.59;MQ0=4;MQRankSum=-3.762;QD=20.71;ReadPosRankSum=3.476;VQSLOD=2.1954;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:48.43:0,48,422	0/0:5,0:5:5.99:0,6,55	0/0:34,0:24:59.54:0,60,542	0/1:36,0:20:5.67:6,0,176	1/1:7,7:14:32.97:332,33,0	1/1:6,7:13:38.77:357,39,0	1/1:8,6:14:32.97:337,33,0	0/0:17,0:17:44.95:0,45,398	1/1:8,10:18:44.94:450,45,0	1/1:7,5:12:32.87:306,33,0	1/1:6,10:16:32.98:337,33,0	0/0:18,0:16:38.92:0,39,339	0/0:15,0:15:35.98:0,36,321	1/1:6,4:10:29.83:257,30,0	1/1:10,5:15:44.73:385,45,0	0/0:12,0:12:27.01:0,27,247	0/0:19,0:19:47.99:0,48,428	0/0:21,0:21:42:0,42,377	0/0:24,0:24:65.93:0,66,589	0/0:8,0:8:18:0,18,158	0/0:7,0:7:17.99:0,18,159	0/0:8,0:8:15:0,15,137	0/0:16,0:16:27.01:0,27,247	0/0:19,0:18:29.64:0,30,263	1/1:10,10:20:53.76:500,54,0	1/1:8,13:21:59.94:597,60,0	0/0:25,0:25:64.97:0,65,558	1/1:0,5:5:15.04:173,15,0
chr10	55167032	.	TTTC	T	2192.93	PASS	AB=0.791;AC=16;AF=0.286;AN=56;BaseQRankSum=7.386;DP=459;FS=7.432;HRun=0;HaplotypeScore=156.4543;InbreedingCoeff=0.1070;MQ=60.93;MQ0=6;MQRankSum=-1.833;QD=10.80;ReadPosRankSum=0.325;VQSLOD=3.0182;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:41.79:0,42,529	0/0:3,0:3:5.88:0,6,73	0/0:35,0:22:59.48:0,59,1017	0/1:40,0:18:12.29:12,0,357	0/1:7,7:14:23.20:167,0,23	1/1:8,5:13:15.87:256,16,0	0/1:9,3:12:65.43:168,0,65	0/0:17,0:17:44.16:0,44,582	0/1:12,4:16:99:156,0,150	0/1:8,5:13:71.25:214,0,71	0/1:12,4:16:81.42:101,0,81	0/0:19,0:17:39.45:0,39,536	0/0:15,0:15:36.01:0,36,467	1/1:4,6:10:19.21:260,19,0	0/1:7,8:15:31.18:369,0,31	0/0:11,0:11:32.27:0,32,561	0/0:18,0:18:41.64:0,42,662	0/0:20,0:20:32.59:0,33,525	0/0:22,0:22:60.40:0,60,860	0/1:10,0:10:9.09:9,0,61	0/0:7,0:7:16.01:0,16,216	0/0:7,0:7:15.03:0,15,265	0/0:13,0:13:26.97:0,27,402	0/0:19,0:18:35.94:0,36,555	0/1:11,8:19:8.03:330,0,8	0/1:14,6:20:99:297,0,155	0/0:24,0:24:51.50:0,52,473	1/1:5,0:5:5.79:24,6,0
chr10	55167035	.	CTTTCTTTTCT	C	6597.45	PASS	AB=1.000;AC=32;AF=0.593;AN=54;BaseQRankSum=4.844;DP=459;FS=9.292;HRun=0;HaplotypeScore=192.6336;InbreedingCoeff=0.3265;MQ=60.28;MQ0=8;MQRankSum=-4.547;QD=23.40;ReadPosRankSum=1.588;VQSLOD=3.5906;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,15:26:36.12:869,36,0	1/1:2,0:2:3.01:70,3,0	0/0:36,0:22:1.09:0,1,101	0/0:42,0:19:11.23:0,11,73	1/1:14,0:14:3.32:260,3,0	1/1:13,0:13:14.41:324,14,0	0/1:11,0:11:36.70:182,0,37	0/0:15,0:15:1.71:0,2,146	1/1:14,0:14:4.97:250,5,0	1/1:13,0:13:6.92:311,7,0	1/1:14,0:14:1.21:189,1,0	0/1:19,0:18:53.42:328,0,53	0/1:16,0:16:17.66:289,0,18	1/1:10,0:10:22.13:436,22,0	1/1:14,0:15:25.49:586,25,0	0/0:14,0:14:32.12:0,32,1310	1/1:13,5:18:33.11:651,33,0	1/1:9,11:20:21.07:527,21,0	0/0:19,0:22:30.07:0,30,354	0/0:1,0:11:26.99:0,27,258	0/0:5,0:6:6:0,6,54	1/1:6,0:6:3.01:45,3,0	0/1:13,0:13:58.84:235,0,59	0/1:19,0:18:99:114,0,105	1/1:19,0:19:19.79:575,20,0	0/1:20,0:20:8.16:357,0,8	0/0:15,0:23:42.99:0,43,384	./.
chr10	55167039	.	CTTTTCTTTTCT	C	7607.39	PASS	AB=0.900;AC=22;AF=0.393;AN=56;BaseQRankSum=7.718;DP=469;FS=0.847;HRun=0;HaplotypeScore=198.4801;InbreedingCoeff=0.3185;MQ=57.34;MQ0=11;MQRankSum=-10.229;QD=34.90;ReadPosRankSum=5.759;VQSLOD=4.3517;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:24:99:345,0,146	0/1:2,0:2:8.82:54,0,9	0/0:37,0:21:41.99:0,42,623	0/0:44,0:17:20.97:0,21,304	0/1:7,7:14:4.81:503,0,5	0/1:10,5:15:12.66:601,0,13	0/1:8,3:11:40.56:380,0,41	0/0:13,0:14:39.06:0,39,685	1/1:15,3:18:26.63:682,27,0	1/1:8,5:13:25.45:661,25,0	1/1:9,4:13:29.94:455,30,0	0/0:19,0:18:2.06:0,2,269	0/0:17,0:17:0.52:0,1,166	1/1:4,6:10:16.39:688,16,0	1/1:6,8:14:11.75:911,12,0	0/0:14,0:14:41.50:0,42,1797	0/1:18,0:18:99:175,0,213	0/1:20,0:20:99:209,0,218	0/0:21,0:20:57.18:0,57,975	0/0:11,0:11:27.09:0,27,492	0/0:5,0:5:15.05:0,15,242	0/0:6,0:6:4.36:0,4,81	0/0:15,0:15:0.23:0,0,193	0/0:20,0:19:19.43:0,19,403	1/1:13,8:21:16.01:980,16,0	1/1:15,6:21:56.99:939,57,0	0/0:26,0:25:69.15:0,69,1187	0/1:4,0:4:18.29:27,0,18
chr10	55167048	.	TC	T	1715.39	PASS	AB=1.000;AC=24;AF=0.429;AN=56;BaseQRankSum=7.222;DP=484;FS=0.000;HRun=1;HaplotypeScore=144.2646;InbreedingCoeff=0.5159;MQ=52.35;MQ0=11;MQRankSum=-8.199;QD=7.91;ReadPosRankSum=4.105;VQSLOD=0.9431;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:24:33.58:34,0,178	1/1:2,0:2:1.58:16,2,0	0/0:35,0:15:25.75:0,26,370	0/0:54,1:22:17.19:0,17,206	1/1:12,0:12:28.79:152,29,0	0/1:17,0:17:30.04:118,0,30	1/1:9,0:9:22.88:119,23,0	0/1:15,0:15:2.40:2,0,363	1/1:18,1:19:6.30:245,6,0	1/1:19,0:19:28.47:203,28,0	1/1:11,1:12:28.85:177,29,0	0/0:19,0:18:31.68:0,32,293	0/0:17,0:17:26.53:0,27,194	1/1:8,1:9:26.07:158,26,0	0/1:15,0:15:7.10:143,0,7	0/0:15,0:15:27.98:0,28,536	0/1:17,0:17:5.32:5,0,259	0/0:20,0:20:4.40:0,4,218	0/0:15,0:14:21.74:0,22,299	0/0:12,0:12:4.10:0,4,121	0/0:6,0:6:12.24:0,12,170	0/0:5,0:5:8.98:0,9,105	0/0:17,0:17:13.83:0,14,171	0/0:24,0:23:26.74:0,27,308	1/1:20,0:20:15.01:212,15,0	1/1:24,0:24:66.68:319,67,0	0/0:26,0:25:7.58:0,8,264	0/1:3,0:3:6.16:6,0,19
chr10	55167049	.	CT	C	4553.53	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=4.648;DP=486;FS=0.425;HRun=4;HaplotypeScore=136.4524;InbreedingCoeff=0.8968;MQ=53.48;MQ0=11;MQRankSum=-6.458;QD=28.28;ReadPosRankSum=3.292;VQSLOD=3.4749;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:2.44:0,2,92	1/1:0,1:2:5.81:48,6,0	0/0:35,0:16:25.68:0,26,366	0/0:57,0:23:24.39:0,24,210	1/1:10,2:12:33:350,33,0	1/1:9,8:17:30.08:326,30,0	1/1:3,6:9:24.04:254,24,0	0/0:15,0:15:26.81:0,27,390	1/1:7,12:19:51.14:574,51,0	1/1:6,13:19:54.13:598,54,0	1/1:5,7:12:30.08:343,30,0	0/0:18,0:17:32.55:0,33,279	0/0:16,0:16:23.83:0,24,187	1/1:7,2:9:27.06:282,27,0	1/1:13,2:15:39.09:411,39,0	0/0:14,0:14:39.60:0,40,546	0/0:17,0:17:20.39:0,20,180	0/0:20,0:20:4.53:0,5,174	0/0:15,0:14:21.40:0,21,253	0/0:12,0:12:12.38:0,12,153	0/0:6,0:6:13.83:0,14,153	0/0:6,0:6:8.98:0,9,87	0/0:16,0:16:21.61:0,22,203	0/0:24,0:23:26.73:0,27,284	1/1:12,7:20:48.07:506,48,0	1/1:6,18:24:72.21:827,72,0	0/0:27,0:26:32.06:0,32,339	1/1:2,1:3:3.01:34,3,0
chr10	55167054	.	CT	C	384.47	PASS	AB=0.908;AC=7;AF=0.125;AN=56;BaseQRankSum=3.084;DP=497;FS=0.000;HRun=4;HaplotypeScore=151.2664;InbreedingCoeff=0.0318;MQ=54.23;MQ0=13;MQRankSum=-6.010;QD=4.37;ReadPosRankSum=4.738;VQSLOD=-0.3262;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:19,3:22:86.17:165,0,86	1/1:2,0:2:2.22:8,2,0	0/0:39,0:17:0.64:0,1,243	0/0:65,0:26:14.20:0,14,223	0/0:17,0:17:28.79:0,29,229	0/0:16,0:16:16.48:0,16,89	0/0:11,0:11:18.34:0,18,109	0/0:16,0:16:14.92:0,15,287	0/0:17,0:17:5.42:0,5,35	0/0:21,0:21:22.15:0,22,269	0/0:12,0:12:5.75:0,6,40	0/0:19,0:18:4.38:0,4,79	0/0:16,0:16:1.61:0,2,37	0/1:9,0:9:3.05:12,0,3	0/0:13,0:13:19.85:0,20,74	0/0:16,0:16:44.18:0,44,607	0/1:12,6:18:99:219,0,145	0/1:18,2:20:77.51:79,0,78	0/0:13,0:11:15.35:0,15,154	0/0:15,0:15:21.33:0,21,261	0/0:6,0:6:10.72:0,11,114	0/0:6,0:6:2.81:0,3,33	0/0:18,0:18:13.79:0,14,154	0/0:22,0:21:11.24:0,11,156	0/1:17,0:17:20.25:20,0,31	0/0:24,0:24:29.97:0,30,159	0/0:24,0:23:29.48:0,29,313	0/0:2,0:2:5.38:0,5,49
chr10	55167055	.	TTTTCTTTTC	T	5239.86	PASS	AB=1.000;AC=27;AF=0.482;AN=56;BaseQRankSum=7.785;DP=501;FS=1.506;HRun=0;HaplotypeScore=192.7116;InbreedingCoeff=-0.0797;MQ=56.50;MQ0=13;MQRankSum=-6.165;QD=15.01;ReadPosRankSum=8.971;VQSLOD=3.0198;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:22:65.84:399,0,66	1/1:2,0:2:3.01:63,3,0	0/1:41,0:18:1.62:2,0,218	0/0:66,0:27:25.23:0,25,334	0/1:17,0:17:99:140,0,239	0/1:16,0:16:99:180,0,127	0/1:11,0:11:99:102,0,153	0/0:16,0:16:5.29:0,5,254	0/1:19,0:19:99:135,0,169	0/1:21,0:21:99:165,0,282	0/1:12,0:12:23.85:116,0,24	1/1:2,15:16:24.08:693,24,0	1/1:1,15:16:21.07:607,21,0	0/1:10,0:10:11.95:248,0,12	0/1:13,0:13:28.83:348,0,29	0/0:16,0:16:42.12:0,42,1474	0/1:17,0:17:99:221,0,157	0/1:22,0:22:99:240,0,213	0/0:12,0:10:20.93:0,21,182	0/0:15,0:15:41.99:0,42,496	0/1:6,0:6:2.21:2,0,156	1/1:1,5:6:12.04:196,12,0	1/1:2,16:18:21.21:552,21,0	1/1:3,19:22:11.95:293,12,0	0/1:17,0:17:23.06:331,0,23	0/1:24,0:24:99:208,0,213	0/0:24,0:23:37.18:0,37,468	0/0:2,0:2:6.01:0,6,62
chr10	55167059	.	CT	C	186.23	PASS	AB=0.984;AC=12;AF=0.214;AN=56;BaseQRankSum=4.738;DP=506;FS=2.362;HRun=4;HaplotypeScore=151.8062;InbreedingCoeff=-0.0884;MQ=54.18;MQ0=12;MQRankSum=-5.842;QD=0.80;ReadPosRankSum=6.461;VQSLOD=-0.2348;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:21.93:0,22,275	1/1:2,0:2:2.22:7,2,0	0/1:38,0:17:2.82:3,0,309	0/1:62,1:24:17.73:18,0,293	0/0:18,0:18:46.97:0,47,499	0/0:16,0:16:28.03:0,28,246	0/0:11,0:11:17.81:0,18,254	0/1:13,0:13:89.11:89,0,207	0/0:19,0:19:52.59:0,53,556	0/0:21,0:21:43.69:0,44,559	0/0:13,0:13:28.52:0,29,266	0/1:17,0:16:18.49:18,0,62	0/1:16,0:16:9.07:19,0,9	0/0:12,0:12:26.29:0,26,193	0/0:14,0:14:38.27:0,38,283	0/0:18,0:18:50.74:0,51,693	0/0:18,0:18:26.73:0,27,330	0/0:22,0:22:20.49:0,20,282	0/1:15,0:13:22.34:22,0,71	0/0:18,0:18:22.41:0,22,374	0/1:7,0:7:20.07:20,0,93	0/0:5,0:5:1.70:0,2,12	0/1:18,0:18:5.27:5,0,44	0/1:21,0:20:0.48:0,0,86	0/0:15,0:15:13.37:0,13,178	0/0:23,0:23:60.03:0,60,586	0/1:18,3:20:99:119,0,163	0/0:4,0:4:12.03:0,12,148
chr10	55167264	.	CT	C	4733.92	PASS	AB=0.739;AC=33;AF=0.589;AN=56;BaseQRankSum=0.373;DP=574;FS=3.365;HRun=12;HaplotypeScore=68.4752;InbreedingCoeff=0.7533;MQ=66.82;MQ0=1;MQRankSum=0.310;QD=13.30;ReadPosRankSum=1.971;VQSLOD=5.3504;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,1:42:84.93:0,85,1022	0/0:2,0:2:5.93:0,6,39	0/1:23,0:16:17.14:17,0,141	0/0:24,0:14:10.38:0,10,65	1/1:7,12:20:31.72:238,32,0	1/1:3,16:19:47.81:371,48,0	1/1:2,10:12:29.87:232,30,0	0/1:13,17:29:56.02:309,0,56	1/1:4,21:25:47.81:371,48,0	1/1:7,14:21:41.79:325,42,0	1/1:2,16:18:44.82:348,45,0	0/0:4,0:13:14.33:0,14,77	0/0:8,0:26:29.29:0,29,153	0/1:6,7:13:3.56:159,0,4	1/1:4,25:29:65.71:511,66,0	1/1:3,0:23:34.63:100,35,0	0/0:31,1:33:57.74:0,58,737	0/0:17,0:17:48.05:0,48,474	1/1:6,7:12:17.92:139,18,0	1/1:1,13:14:38.85:302,39,0	1/1:4,15:19:11.12:271,11,0	0/0:4,0:16:28.13:0,28,159	0/0:6,0:17:29.22:0,29,165	0/0:9,0:27:39.48:0,39,197	1/1:7,12:19:8.38:248,8,0	1/1:3,16:20:46.82:351,47,0	1/1:6,18:24:47.78:371,48,0	1/1:6,5:11:8.96:70,9,0
chr10	55167870	.	A	ATT	11413.14	PASS	AB=1.000;AC=43;AF=0.896;AN=48;BaseQRankSum=-3.155;DP=347;FS=18.441;HRun=7;HaplotypeScore=61.1029;InbreedingCoeff=0.5770;MQ=80.40;MQ0=0;MQRankSum=-5.438;QD=34.69;ReadPosRankSum=3.596;VQSLOD=3.4265;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,17:18:42.14:689,42,0	1/1:2,0:2:5.97:50,6,0	0/0:12,0:12:20.09:0,20,193	0/1:14,0:14:18.03:18,0,145	1/1:2,27:31:77.59:1094,78,0	1/1:0,8:8:15.05:246,15,0	1/1:2,5:7:11.95:138,12,0	1/1:4,17:21:51.17:837,51,0	1/1:1,7:8:12.04:197,12,0	1/1:6,14:20:42.07:604,42,0	1/1:0,14:14:39.13:595,39,0	./.	./.	1/1:1,4:5:6.02:98,6,0	1/1:5,6:11:26.66:362,27,0	1/1:1,13:14:27.09:443,27,0	1/1:1,14:16:42.14:668,42,0	1/1:1,9:10:24.08:394,24,0	1/1:3,13:16:42.12:648,42,0	1/1:3,30:33:87.26:1389,87,0	1/1:0,8:8:15.05:246,15,0	0/0:0,0:1:2.37:0,2,8	./.	./.	1/1:6,11:17:44.63:577,45,0	1/1:4,15:20:51.15:750,51,0	1/1:2,25:27:66.14:1024,66,0	1/1:1,8:9:21.07:345,21,0
chr10	55168500	.	GC	G	12642.84	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=18.996;DP=598;FS=2.563;HRun=1;HaplotypeScore=118.9058;InbreedingCoeff=0.9997;MQ=63.72;MQ0=2;MQRankSum=-5.562;QD=40.01;ReadPosRankSum=0.462;VQSLOD=4.5141;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:38:99:0,114,1796	0/0:11,0:11:33.11:0,33,523	0/0:17,0:16:48.16:0,48,753	0/0:14,0:12:30.10:0,30,471	1/1:0,22:22:63.21:881,63,0	1/1:0,20:20:57.19:796,57,0	1/1:0,24:24:72.24:1005,72,0	0/0:24,0:24:72.25:0,72,1151	1/1:0,22:22:63.21:879,63,0	1/1:0,23:23:69.23:965,69,0	1/1:0,18:18:54.18:755,54,0	1/1:0,19:19:57.19:794,57,0	1/1:0,12:12:36.12:501,36,0	1/1:0,25:25:72.24:1002,72,0	1/1:0,24:24:66.22:922,66,0	0/0:22,1:23:27.28:0,27,990	0/0:33,0:32:96.33:0,96,1534	0/0:28,0:26:72.25:0,72,1151	0/0:22,0:22:66.22:0,66,1052	0/0:17,0:17:51.17:0,51,815	0/0:40,0:40:99:0,111,1746	1/1:0,15:15:39.13:542,39,0	1/1:0,16:16:45.15:625,45,0	1/1:1,14:15:33.11:460,33,0	1/1:0,21:21:63.21:881,63,0	1/1:0,27:27:81.27:1132,81,0	0/0:14,0:14:42.14:0,42,668	1/1:0,13:13:36.12:503,36,0
chr10	55168523	.	CTAAT	C	3910.61	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=9.351;DP=674;FS=14.985;HRun=0;HaplotypeScore=191.2863;InbreedingCoeff=0.9979;MQ=61.33;MQ0=0;MQRankSum=-12.178;QD=42.05;ReadPosRankSum=-2.197;VQSLOD=2.1985;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,126,3441	0/0:10,0:10:30.10:0,30,833	0/0:22,0:22:62.94:0,63,1568	0/0:23,0:23:66.19:0,66,1652	0/0:27,0:27:81.24:0,81,2166	0/0:21,0:21:60.15:0,60,1581	0/0:24,0:24:72.22:0,72,1934	0/0:29,0:29:87.28:0,87,2243	0/0:22,0:22:66.22:0,66,1784	0/0:31,0:31:93.31:0,93,2488	0/0:20,0:20:57.20:0,57,1574	1/1:2,15:17:42.06:791,42,0	1/1:2,14:16:36.12:715,36,0	0/0:28,0:28:81.16:0,81,2120	0/0:23,0:23:66.16:0,66,1778	0/0:29,0:29:87.26:0,87,2338	0/0:34,0:34:96.33:0,96,2615	0/0:24,0:22:63.17:0,63,1684	0/0:21,0:20:63.22:0,63,1634	0/0:19,0:19:57.16:0,57,1531	0/0:46,0:46:99:0,132,3644	1/1:0,18:18:47.74:818,48,0	1/1:1,26:27:68.64:1237,69,0	1/1:2,13:14:18.06:350,18,0	0/0:24,0:24:66.23:0,66,1842	0/0:28,0:28:81.28:0,81,2223	0/0:23,0:23:69.23:0,69,1836	0/0:11,0:11:33.11:0,33,890
chr10	55168635	.	G	GA	1592.75	PASS	AB=0.538;AC=9;AF=0.161;AN=56;BaseQRankSum=7.422;DP=609;FS=81.635;HRun=1;HaplotypeScore=127.4989;InbreedingCoeff=0.8957;MQ=65.92;MQ0=2;MQRankSum=-6.945;QD=19.66;ReadPosRankSum=-2.764;VQSLOD=-0.3919;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,126,1564	0/0:11,0:11:33.11:0,33,427	0/0:11,0:8:21.04:0,21,244	0/0:36,0:31:66.96:0,67,752	0/0:26,0:25:12.97:0,13,153	0/0:13,0:13:28.33:0,28,346	0/0:15,0:15:20.65:0,21,243	0/0:18,0:18:45.15:0,45,583	0/0:18,0:17:28.44:0,28,337	0/0:24,0:24:56.94:0,57,706	0/0:18,0:17:27.08:0,27,336	1/1:1,26:26:38.36:712,38,0	1/1:0,12:12:33.11:478,33,0	0/0:15,0:15:19.30:0,19,234	0/0:12,0:12:12.92:0,13,147	0/0:31,0:31:87.25:0,87,1090	0/0:33,0:33:96.23:0,96,1192	0/0:37,0:37:99:0,105,1353	0/0:20,0:20:60.16:0,60,737	0/0:22,0:22:63.19:0,63,800	0/0:61,0:61:99:0,184,2321	1/1:1,20:19:42.23:399,42,0	1/1:0,7:7:11.95:127,12,0	0/1:2,12:14:0.48:38,0,0	0/0:10,0:9:24.06:0,24,290	0/0:19,0:18:47.18:0,47,599	0/0:30,0:30:90.21:0,90,1131	0/0:4,0:4:9.01:0,9,101
chr10	55168638	.	C	CAGAGAGAGAGAGAG	15139.16	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=5.634;DP=702;FS=0.810;HRun=0;HaplotypeScore=276.2165;InbreedingCoeff=0.8802;MQ=64.57;MQ0=2;MQRankSum=-10.571;QD=45.60;ReadPosRankSum=-4.233;VQSLOD=3.6155;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,114,3798	0/0:11,0:11:27.09:0,27,1038	0/0:12,0:9:21.54:0,22,498	0/0:40,0:31:34:0,34,730	1/1:5,18:24:2.48:204,2,0	1/1:14,2:17:27.09:1164,27,0	1/1:13,8:23:15:847,15,0	0/0:19,0:19:43.69:0,44,1511	1/1:10,10:23:27.09:1596,27,0	1/1:17,15:33:74.28:3232,74,0	1/1:17,0:16:11.38:232,11,0	1/1:27,0:30:42.61:1440,43,0	1/1:15,0:16:30.09:684,30,0	1/1:17,0:17:6.02:100,6,0	1/1:5,12:18:21.07:1340,21,0	0/0:30,0:32:81.26:0,81,2886	0/0:33,0:34:87.25:0,87,2848	0/0:34,0:34:46.64:0,47,3074	0/0:22,0:23:32.15:0,32,1433	0/0:22,0:23:57.17:0,57,1963	0/0:63,0:63:99:0,157,5472	1/1:32,1:34:23.13:912,23,0	1/1:11,0:12:3.01:70,3,0	1/1:15,0:17:8.98:344,9,0	1/1:12,0:11:3.01:105,3,0	1/1:11,9:27:69.23:2759,69,0	0/0:32,0:32:72.24:0,72,2614	1/1:2,0:6:6.02:110,6,0
chr10	55169429	.	CT	C	5457.15	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=19.782;DP=618;FS=4.638;HRun=3;HaplotypeScore=183.4591;InbreedingCoeff=0.9845;MQ=65.39;MQ0=0;MQRankSum=-19.122;QD=17.72;ReadPosRankSum=1.064;VQSLOD=4.1230;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,129,1831	0/0:10,0:10:30.05:0,30,389	0/0:30,0:30:87.25:0,87,1187	0/0:21,0:21:59.88:0,60,788	1/1:2,22:24:49.29:344,49,0	1/1:2,13:15:38.56:289,39,0	1/1:7,16:23:56.56:429,57,0	0/0:23,0:23:69.23:0,69,979	1/1:7,20:26:59.44:443,59,0	1/1:4,11:15:38.78:308,39,0	1/1:3,7:10:20.06:144,20,0	1/1:6,19:25:59.60:450,60,0	1/1:2,16:18:50.40:373,50,0	1/1:2,16:18:47.42:351,47,0	1/1:5,26:31:80.33:615,80,0	0/0:27,1:28:58.44:0,58,1100	0/0:24,0:24:72.23:0,72,1016	0/0:24,0:24:66.18:0,66,909	0/0:15,0:15:39.13:0,39,560	0/0:30,0:30:87.29:0,87,1253	0/0:33,0:33:96.32:0,96,1381	1/1:2,11:13:35.86:279,36,0	1/1:0,15:15:43.99:309,44,0	1/1:8,15:23:32.38:250,32,0	1/1:3,16:19:44.52:331,45,0	1/1:10,20:30:61.43:496,61,0	0/0:28,0:27:81.25:0,81,1133	1/1:0,2:2:5.99:48,6,0
chr10	55169431	.	T	TAG	5274.49	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=19.569;DP=567;FS=4.100;HRun=0;HaplotypeScore=188.7471;InbreedingCoeff=0.9842;MQ=66.77;MQ0=0;MQRankSum=-19.152;QD=20.36;ReadPosRankSum=1.383;VQSLOD=5.0246;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,129,2092	0/0:10,0:10:30.10:0,30,483	0/0:31,0:31:90.29:0,90,1411	0/0:21,0:21:63.20:0,63,971	1/1:22,0:22:47.22:369,47,0	1/1:13,0:13:37.97:246,38,0	1/1:19,0:19:56.64:535,57,0	0/0:25,0:25:75.22:0,75,1168	1/1:20,0:20:58.74:409,59,0	1/1:11,1:14:38.80:332,39,0	1/1:7,0:7:18.52:167,19,0	1/1:19,2:21:59.28:427,59,0	1/1:17,0:17:49.77:317,50,0	1/1:16,0:16:46.46:298,46,0	1/1:27,0:27:79.59:547,80,0	0/0:27,0:27:61.55:0,62,1253	0/0:24,0:24:72.25:0,72,1172	0/0:23,0:23:69.18:0,69,1069	0/0:13,0:13:39.13:0,39,636	0/0:30,0:30:87.30:0,87,1420	0/0:33,0:33:99:0,99,1586	1/1:12,0:12:35.54:261,36,0	1/1:15,0:15:39.80:292,40,0	1/1:16,0:16:31.61:229,32,0	1/1:16,0:15:44.40:299,44,0	1/1:20,1:22:62.51:489,63,0	0/0:27,0:26:81.26:0,81,1277	1/1:2,0:2:5.99:58,6,0
chr10	55169433	.	AACT	A	6180.52	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=20.082;DP=559;FS=4.098;HRun=0;HaplotypeScore=195.0848;InbreedingCoeff=0.9846;MQ=65.31;MQ0=0;MQRankSum=-19.235;QD=24.62;ReadPosRankSum=1.526;VQSLOD=4.4303;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,135,3312	0/0:10,0:10:30.10:0,30,739	0/0:29,0:29:84.29:0,84,2016	0/0:22,0:22:36.56:0,37,1394	1/1:0,22:22:50.77:411,51,0	1/1:0,13:13:38.98:335,39,0	1/1:1,16:17:50.97:436,51,0	0/0:24,0:24:72.25:0,72,1770	1/1:0,20:20:59.98:518,60,0	1/1:1,11:12:36.02:335,36,0	1/1:0,7:7:20.88:168,21,0	1/1:1,19:20:59.96:511,60,0	1/1:0,16:16:47.96:407,48,0	1/1:0,16:16:47.97:408,48,0	1/1:0,26:26:77.97:676,78,0	0/0:26,1:27:55.33:0,55,1849	0/0:26,0:26:78.24:0,78,1825	0/0:22,0:22:66.20:0,66,1560	0/0:15,0:15:45.15:0,45,1092	0/0:30,0:30:90.31:0,90,2217	0/0:33,0:33:99:0,99,2386	1/1:1,11:12:35.85:294,36,0	1/1:0,15:15:44.96:381,45,0	1/1:1,15:16:32.99:294,33,0	1/1:0,16:16:44.70:386,45,0	1/1:1,20:21:62.28:568,62,0	0/0:25,0:24:75.26:0,75,1820	1/1:0,2:2:6.01:55,6,0
chr10	55169437	.	GTCACC	G	11489.54	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=19.755;DP=551;FS=1.385;HRun=0;HaplotypeScore=195.6189;InbreedingCoeff=0.9840;MQ=66.06;MQ0=0;MQRankSum=-19.232;QD=46.71;ReadPosRankSum=2.387;VQSLOD=5.0739;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,129,4033	0/0:9,0:9:27.09:0,27,842	0/0:28,0:28:84.29:0,84,2515	0/0:22,0:22:59.28:0,59,1823	1/1:0,22:22:45.15:713,45,0	1/1:0,13:13:39.13:646,39,0	1/1:0,16:16:48.16:807,48,0	0/0:24,0:24:72.23:0,72,2162	1/1:0,20:20:59.87:957,60,0	1/1:0,11:11:33.11:568,33,0	1/1:0,7:7:18.06:277,18,0	1/1:0,19:19:57.19:956,57,0	1/1:0,16:16:48.16:796,48,0	1/1:0,16:16:48.16:795,48,0	1/1:0,26:26:78.27:1300,78,0	0/0:26,1:27:30.33:0,30,2356	0/0:25,0:25:75.26:0,75,2374	0/0:21,0:21:60.21:0,60,1939	0/0:15,0:15:42.13:0,42,1243	0/0:31,0:31:93.32:0,93,2963	0/0:33,0:33:99:0,99,3095	1/1:0,11:12:33.11:553,33,0	1/1:0,15:15:45.15:712,45,0	1/1:0,15:15:33.11:528,33,0	1/1:0,16:16:45.04:749,45,0	1/1:0,20:20:60.21:1030,60,0	0/0:27,0:26:81.26:0,81,2536	1/1:0,2:2:6.02:103,6,0
chr10	55170077	.	GC	G	143.20	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.812;DP=681;FS=18.283;HRun=2;HaplotypeScore=67.0240;InbreedingCoeff=0.9906;MQ=71.00;MQ0=0;MQRankSum=-0.047;QD=15.91;ReadPosRankSum=0.813;VQSLOD=2.2827;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,132,1932	1/1:1,8:9:18.06:234,18,0	0/0:15,0:14:42.09:0,42,535	0/0:18,0:18:39.85:0,40,525	0/0:13,0:13:39.13:0,39,582	0/0:14,0:14:42.12:0,42,590	0/0:32,0:32:93.29:0,93,1353	0/0:20,0:20:60.20:0,60,899	0/0:31,0:31:93.23:0,93,1346	0/0:23,0:23:63.21:0,63,928	0/0:16,0:16:48.14:0,48,678	0/0:31,0:31:93.31:0,93,1389	0/0:27,0:27:78.26:0,78,1168	0/0:26,0:26:72.23:0,72,1046	0/0:22,0:22:63.20:0,63,923	0/0:25,0:25:75.23:0,75,1085	0/0:34,0:34:99:0,99,1461	0/0:18,0:18:54.18:0,54,809	0/0:12,0:12:36.09:0,36,480	0/0:14,0:14:42.14:0,42,629	0/0:71,0:71:99:0,202,3008	0/0:15,0:15:45.13:0,45,633	0/0:20,0:20:57.16:0,57,780	0/0:47,0:47:99:0,138,2045	0/0:17,0:17:48.16:0,48,718	0/0:31,0:31:90.29:0,90,1312	0/0:24,0:24:72.23:0,72,1052	0/0:10,0:10:27.09:0,27,405
chr10	55170614	.	T	TAAGA	17464.66	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=4.203;DP=562;FS=10.592;HRun=0;HaplotypeScore=182.1476;InbreedingCoeff=0.9605;MQ=48.58;MQ0=1;MQRankSum=-9.310;QD=49.20;ReadPosRankSum=1.287;VQSLOD=5.0719;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:67.25:0,67,1511	1/1:9,0:8:7.37:76,7,0	0/0:17,0:13:27.09:0,27,502	0/0:28,0:18:42.13:0,42,726	1/1:6,25:31:84.17:1821,84,0	1/1:4,18:22:39.13:975,39,0	1/1:2,20:21:41.93:1023,42,0	0/0:14,0:14:41.98:0,42,545	1/1:7,12:19:39.13:948,39,0	1/1:11,20:31:84.24:1906,84,0	1/1:4,23:27:57.19:1369,57,0	1/1:7,7:13:33.10:774,33,0	1/1:1,15:16:27.09:665,27,0	1/1:3,12:15:21.07:489,21,0	1/1:4,23:27:45.15:1104,45,0	0/0:23,0:23:69.22:0,69,1229	0/0:15,0:15:32.69:0,33,577	0/0:16,0:16:18.03:0,18,287	0/0:14,0:13:32.82:0,33,316	0/0:17,0:17:50.78:0,51,536	0/0:2,0:2:5.98:0,6,60	1/1:5,21:26:59.95:1273,60,0	1/1:0,32:32:81.28:1944,81,0	1/1:8,2:9:14.95:192,15,0	1/1:8,15:23:48.16:1187,48,0	1/1:5,21:25:66.21:1496,66,0	0/0:28,0:28:80.63:0,81,770	1/1:2,3:5:9.03:222,9,0
chr10	55170622	.	AAAGAAAGGAAGGAAGG	A	3884.47	PASS	AB=1.000;AC=12;AF=0.214;AN=56;BaseQRankSum=-6.763;DP=523;FS=3.854;HRun=0;HaplotypeScore=334.4212;InbreedingCoeff=0.7744;MQ=42.55;MQ0=4;MQRankSum=-0.373;QD=45.17;ReadPosRankSum=-1.714;VQSLOD=2.3020;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:66.21:0,66,2150	0/1:9,0:8:99:149,0,124	0/0:15,0:9:21.07:0,21,1062	0/0:27,0:16:35.98:0,36,1366	0/0:30,0:30:73.62:0,74,1027	0/0:18,0:18:41.79:0,42,617	0/0:22,0:21:41.71:0,42,705	1/1:13,0:13:21.07:343,21,0	0/0:19,0:19:42.77:0,43,588	0/0:27,0:27:74.85:0,75,1358	0/0:28,0:28:60.24:0,60,731	0/0:15,0:14:29.65:0,30,444	0/0:13,0:13:31.77:0,32,309	0/0:12,0:11:20.22:0,20,286	0/0:25,0:25:50.73:0,51,706	0/0:24,0:24:57.67:0,58,4034	0/0:14,0:14:24.45:0,24,570	0/0:14,0:14:11.99:0,12,234	1/1:12,0:10:26.99:451,27,0	1/1:12,5:17:45.14:1116,45,0	1/1:3,0:3:8.89:134,9,0	0/0:23,0:23:47.77:0,48,706	0/0:30,0:30:80.24:0,80,1098	0/1:9,0:8:5.35:5,0,38	0/0:22,0:22:50.93:0,51,912	0/0:26,0:25:11.24:0,11,896	1/1:21,2:23:69.14:1686,69,0	0/0:4,0:4:12.04:0,12,241
chr10	55170626	.	AAAGG	A	1532.03	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=-4.898;DP=510;FS=4.863;HRun=0;HaplotypeScore=242.4026;InbreedingCoeff=0.7985;MQ=41.13;MQ0=6;MQRankSum=0.413;QD=12.36;ReadPosRankSum=0.391;VQSLOD=2.7233;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:26,1:27:62.01:868,62,0	0/1:9,0:8:29.97:30,0,30	0/0:15,0:8:18.02:0,18,239	0/0:26,0:15:29.88:0,30,379	0/0:30,0:30:68.97:0,69,527	0/0:17,0:17:39.55:0,40,276	0/0:23,0:22:43.23:0,43,392	1/1:9,0:9:5.97:44,6,0	0/0:18,0:18:36.77:0,37,289	0/0:27,0:27:68.85:0,69,480	0/0:27,0:27:59.29:0,59,410	0/0:15,0:14:29.36:0,29,181	0/0:14,0:14:33.20:0,33,206	0/0:12,0:11:7.45:0,7,114	0/0:26,0:26:44.49:0,44,354	0/0:24,0:24:60.33:0,60,1270	1/1:11,0:11:19.08:189,19,0	1/1:6,10:14:3.01:52,3,0	1/1:2,0:9:6.43:44,6,0	1/1:16,0:16:27.93:191,28,0	1/1:3,0:3:5.91:39,6,0	0/0:25,0:24:50.15:0,50,388	0/0:29,0:29:79.07:0,79,512	0/0:11,0:10:7.55:0,8,31	0/0:22,0:22:51.55:0,52,417	0/0:21,0:20:45.68:0,46,367	1/1:23,0:23:34.68:265,35,0	0/0:4,0:4:10.33:0,10,95
chr10	55170633	.	GGA	G	155.86	PASS	AB=0.801;AC=7;AF=0.125;AN=56;BaseQRankSum=-3.737;DP=509;FS=2.742;HRun=0;HaplotypeScore=237.3323;InbreedingCoeff=0.2740;MQ=39.34;MQ0=14;MQRankSum=2.438;QD=1.75;ReadPosRankSum=1.717;VQSLOD=2.6795;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:33:42.91:43,0,102	0/0:8,0:7:14.31:0,14,137	0/0:19,0:7:21.07:0,21,408	0/0:26,0:13:32.94:0,33,606	0/0:30,0:30:75.25:0,75,1429	0/0:16,0:16:42.14:0,42,815	0/0:20,0:19:44.94:0,45,850	0/1:7,2:7:7.65:38,0,8	0/0:18,0:18:49.72:0,50,863	0/0:27,0:27:80.95:0,81,1467	0/0:27,0:27:66.22:0,66,1198	0/0:17,0:16:33.21:0,33,596	0/0:13,0:13:36.57:0,37,660	0/0:13,0:12:31.33:0,31,504	0/0:26,0:26:56.98:0,57,994	0/0:24,0:23:63.05:0,63,1213	0/0:10,0:10:5.78:0,6,89	0/0:15,0:13:0.48:0,0,77	1/1:10,1:9:6.88:54,7,0	0/1:8,5:13:5.12:38,0,5	0/1:2,1:3:2.61:5,0,3	0/0:25,0:24:52.99:0,53,980	0/0:28,0:28:81.28:0,81,1560	0/0:12,0:11:7.79:0,8,92	0/0:22,0:22:55.43:0,55,1027	0/0:20,0:19:48.16:0,48,940	0/1:12,8:20:9.96:102,0,10	0/0:4,0:4:12.04:0,12,221
chr10	55170637	.	GGA	G	99.90	PASS	AB=0.884;AC=6;AF=0.107;AN=56;BaseQRankSum=-2.410;DP=517;FS=5.517;HRun=0;HaplotypeScore=244.8246;InbreedingCoeff=-0.1290;MQ=36.84;MQ0=15;MQRankSum=1.243;QD=0.95;ReadPosRankSum=2.104;VQSLOD=1.5345;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:32,0:32:45.18:73,0,45	0/0:9,0:8:15.86:0,16,176	0/0:18,0:6:18.04:0,18,326	0/0:24,0:12:33.06:0,33,562	0/0:29,0:29:75.09:0,75,1231	0/0:16,0:16:42.13:0,42,727	0/0:18,0:17:15.88:0,16,754	0/0:11,2:11:0.11:0,0,178	0/0:18,0:18:51.07:0,51,758	0/0:27,0:27:80.96:0,81,1203	0/0:25,0:25:66.18:0,66,1097	0/0:17,0:16:33.20:0,33,546	0/0:13,0:13:39.13:0,39,681	0/0:13,0:12:29.65:0,30,403	0/0:26,0:26:53.95:0,54,910	0/0:25,0:24:66.15:0,66,1226	0/0:13,0:13:15.21:0,15,201	0/1:13,0:11:3.60:4,0,37	0/1:12,1:10:21.55:22,0,35	0/1:11,5:16:27.77:28,0,44	0/1:5,1:5:16:16,0,47	0/0:25,0:24:54.12:0,54,923	0/0:27,0:27:81.27:0,81,1443	0/0:11,0:10:9.88:0,10,120	0/0:21,0:21:56.85:0,57,907	0/0:20,0:19:47.74:0,48,776	0/1:17,8:24:59.35:76,0,59	0/0:4,0:4:12.03:0,12,178
chr10	55170647	.	AAGAGAGAGAGAG	A	16497.01	PASS	AB=1.000;AC=41;AF=0.732;AN=56;BaseQRankSum=9.546;DP=491;FS=1.657;HRun=0;HaplotypeScore=253.4868;InbreedingCoeff=0.2897;MQ=33.11;MQ0=18;MQRankSum=-7.054;QD=38.73;ReadPosRankSum=1.783;VQSLOD=4.5197;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:31,0:31:79.61:80,0,495	0/1:11,0:10:99:162,0,152	0/0:10,0:2:6.02:0,6,111	0/0:17,0:6:14.62:0,15,334	1/1:25,0:25:66.10:1169,66,0	1/1:13,0:13:34.18:688,34,0	1/1:16,0:14:33.25:411,33,0	0/1:20,0:15:86:131,0,86	1/1:17,0:17:51.16:1233,51,0	1/1:24,0:23:65.71:1747,66,0	1/1:24,0:24:71.40:1457,71,0	1/1:9,9:17:33.11:667,33,0	1/1:13,0:13:39.13:851,39,0	0/1:12,0:11:89.80:667,0,90	1/1:22,0:22:59.50:1246,59,0	0/0:25,0:24:19.93:0,20,1318	0/1:16,0:16:77.11:77,0,78	0/0:13,0:11:6.02:0,6,107	0/1:15,0:11:99:104,0,331	0/1:20,0:19:50.15:570,0,50	1/1:7,0:6:5.47:91,5,0	1/1:23,0:21:47.37:958,47,0	1/1:22,0:22:66.19:1035,66,0	1/1:5,8:12:15.03:337,15,0	1/1:19,0:19:52.04:905,52,0	1/1:16,0:15:40.34:899,40,0	1/1:24,0:23:25.58:761,26,0	1/1:5,0:4:12:251,12,0
chr10	55170650	.	AGAGAGAGAG	A	9815.02	PASS	AB=0.958;AC=36;AF=0.643;AN=56;BaseQRankSum=9.116;DP=467;FS=0.000;HRun=0;HaplotypeScore=235.5491;InbreedingCoeff=0.4345;MQ=33.07;MQ0=18;MQRankSum=-6.468;QD=28.78;ReadPosRankSum=4.239;VQSLOD=4.2139;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:11.34:0,11,788	0/1:10,0:9:32.64:33,0,251	0/0:10,0:2:6.02:0,6,106	0/0:17,0:6:14.82:0,15,408	1/1:18,3:21:54.56:754,55,0	1/1:10,1:11:30.10:480,30,0	1/1:13,0:10:25.07:212,25,0	0/0:17,0:12:16.54:0,17,219	1/1:12,5:17:49.82:840,50,0	1/1:18,5:22:66.15:1296,66,0	1/1:19,4:23:68.42:962,68,0	1/1:18,0:17:32.85:401,33,0	1/1:10,0:13:39.06:520,39,0	0/1:8,4:11:79.27:447,0,79	1/1:15,5:20:50.50:811,51,0	0/0:25,0:24:60.75:0,61,1765	0/1:16,0:16:22.15:22,0,197	0/0:13,0:11:6.02:0,6,158	0/0:14,0:10:0.46:0,0,385	0/1:20,0:19:95.71:96,0,154	0/1:7,0:6:16.96:27,0,17	1/1:19,2:20:43.66:620,44,0	1/1:22,0:22:63.25:599,63,0	1/1:12,1:12:11.64:169,12,0	1/1:11,3:14:41.29:589,41,0	1/1:12,3:14:34.05:608,34,0	0/1:23,0:22:82.03:159,0,82	1/1:5,1:5:10.07:171,10,0
chr10	55170652	.	AGAGAGAG	A	8660.61	PASS	AB=0.967;AC=36;AF=0.643;AN=56;BaseQRankSum=9.955;DP=475;FS=1.513;HRun=0;HaplotypeScore=229.7123;InbreedingCoeff=0.5092;MQ=33.33;MQ0=18;MQRankSum=-5.018;QD=25.10;ReadPosRankSum=3.417;VQSLOD=4.6288;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:31.22:0,31,679	0/1:10,0:9:31.93:32,0,216	0/0:10,0:2:6.02:0,6,99	0/0:17,0:6:14.79:0,15,367	1/1:19,3:21:51.99:640,52,0	1/1:10,2:12:33.10:459,33,0	1/1:13,0:10:21.83:208,22,0	0/0:19,0:14:37.99:0,38,327	1/1:13,4:17:47.36:718,47,0	1/1:17,6:22:66.10:1155,66,0	1/1:20,4:24:68.06:830,68,0	1/1:16,0:17:32.72:363,33,0	1/1:13,0:14:41.81:499,42,0	0/1:9,3:11:49.21:378,0,49	1/1:16,4:20:48.48:674,48,0	0/0:24,0:23:47.37:0,47,1540	0/1:16,0:16:2.16:2,0,157	0/0:13,0:11:6.02:0,6,140	0/0:15,0:11:7.60:0,8,423	0/1:20,0:19:98.56:99,0,133	0/1:7,0:6:11.16:11,0,34	1/1:20,2:20:43.33:545,43,0	1/1:22,0:22:62.74:554,63,0	1/1:12,0:12:11.97:147,12,0	1/1:10,4:14:40.66:531,41,0	1/1:13,3:14:31.54:509,32,0	0/1:24,0:23:55.55:162,0,56	1/1:5,1:5:8.72:145,9,0
chr10	55170659	.	GAGAAAGAAAGAAAGAA	G	1800.46	PASS	AB=0.948;AC=18;AF=0.346;AN=52;BaseQRankSum=1.351;DP=474;FS=5.767;HRun=0;HaplotypeScore=305.1698;InbreedingCoeff=-0.2840;MQ=34.34;MQ0=17;MQRankSum=-1.921;QD=6.06;ReadPosRankSum=0.229;VQSLOD=1.8284;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:15,14:29:40.84:385,0,41	0/0:11,0:10:10.55:0,11,382	./.	./.	0/1:22,0:21:95.16:95,0,169	0/0:16,0:16:22.07:0,22,280	0/0:13,0:10:15:0,15,258	0/0:19,0:14:18.06:0,18,321	0/1:15,0:15:99:135,0,164	0/1:23,0:22:92.48:92,0,127	0/1:22,0:22:99:177,0,230	0/1:19,0:18:81.17:81,0,161	0/1:13,0:13:54.91:66,0,55	0/1:15,0:14:99:104,0,425	0/1:21,0:21:99:135,0,345	0/0:27,0:26:42.23:0,42,806	0/1:5,10:15:82.02:149,0,82	1/1:15,0:13:6.02:139,6,0	0/1:15,0:12:12.48:12,0,37	0/0:18,0:16:17.97:0,18,244	0/0:7,0:6:2.87:0,3,39	0/1:23,0:20:99:121,0,194	0/0:20,0:20:28.97:0,29,311	1/1:12,0:11:5.95:97,6,0	0/1:16,0:16:79.08:79,0,286	0/1:22,0:20:87.55:88,0,466	0/0:20,0:19:3.42:0,3,256	0/0:5,0:4:7.56:0,8,91
chr10	55171666	.	TC	T	5296.31	PASS	AB=0.986;AC=37;AF=0.661;AN=56;BaseQRankSum=1.102;DP=538;FS=33.673;HRun=1;HaplotypeScore=84.0680;InbreedingCoeff=0.6669;MQ=65.31;MQ0=14;MQRankSum=-5.602;QD=14.39;ReadPosRankSum=-4.852;VQSLOD=1.6204;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:22:21.81:22,0,349	1/1:11,0:11:29.20:217,29,0	0/0:18,0:11:27.22:0,27,211	0/0:21,0:10:15.48:0,15,108	1/1:33,0:33:72.11:444,72,0	1/1:21,0:20:53.42:384,53,0	1/1:6,0:6:8.60:33,9,0	0/1:22,1:23:13.41:13,0,151	1/1:14,1:15:38.17:293,38,0	1/1:23,1:24:60.69:389,61,0	1/1:19,0:19:43.32:326,43,0	1/1:14,1:14:41.68:386,42,0	1/1:7,1:8:12.57:136,13,0	1/1:19,0:19:39.52:255,40,0	1/1:16,1:17:36.53:268,37,0	0/0:13,0:13:0.02:0,0,75	0/0:36,0:33:56.29:0,56,571	0/0:21,0:19:25.79:0,26,348	0/0:18,0:17:30.76:0,31,257	0/0:36,0:36:1.63:0,2,286	0/0:7,0:7:12.69:0,13,80	1/1:13,1:14:35.84:274,36,0	1/1:18,4:22:60.60:546,61,0	1/1:9,2:11:23.71:215,24,0	1/1:30,0:30:78.45:543,78,0	1/1:20,0:20:41.94:273,42,0	0/1:19,0:19:16.72:17,0,88	1/1:17,0:17:41.48:263,41,0
chr10	55171667	.	CT	C	735.07	PASS	AB=0.924;AC=18;AF=0.321;AN=56;BaseQRankSum=-3.113;DP=536;FS=4.334;HRun=15;HaplotypeScore=99.9788;InbreedingCoeff=0.2277;MQ=64.29;MQ0=15;MQRankSum=3.113;QD=2.91;ReadPosRankSum=0.063;VQSLOD=0.6439;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:23,1:23:4.87:5,0,267	0/1:11,0:11:8.78:9,0,16	0/0:17,0:10:1.51:0,2,27	0/0:20,1:10:7.11:0,7,31	0/0:33,0:33:42.19:0,42,234	0/0:22,0:21:24.69:0,25,169	0/0:6,0:6:11.78:0,12,80	1/1:11,12:23:32.66:199,33,0	0/0:15,0:15:4.32:0,4,79	0/0:24,0:24:27.74:0,28,270	0/0:19,0:19:17.66:0,18,94	0/1:14,0:13:6.21:25,0,6	0/1:8,0:8:20.77:21,0,33	0/0:19,0:19:28.84:0,29,193	0/0:17,0:17:5:0,5,162	1/1:5,0:13:20.49:60,20,0	0/1:29,6:32:28.46:28,0,352	0/0:20,0:19:42.25:0,42,345	0/1:11,3:14:8.58:64,0,9	1/1:12,21:36:32.35:310,32,0	0/1:3,3:7:30.38:30,0,36	0/1:14,0:14:5.04:5,0,48	0/1:22,0:22:17.34:40,0,17	0/1:10,0:10:0.94:10,0,1	0/0:30,0:30:30.89:0,31,271	0/0:21,0:21:27.55:0,28,186	1/1:6,12:19:17.28:102,17,0	0/0:18,0:18:40.78:0,41,237
chr10	55172704	.	CT	C	1216.08	PASS	AB=0.842;AC=19;AF=0.339;AN=56;BaseQRankSum=-0.950;DP=415;FS=19.532;HRun=9;HaplotypeScore=83.6768;InbreedingCoeff=0.7175;MQ=41.42;MQ0=4;MQRankSum=-3.733;QD=6.68;ReadPosRankSum=3.619;VQSLOD=0.3366;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:12,21:31:17.95:248,18,0	1/1:2,12:14:25.79:211,26,0	0/0:7,0:1:3:0,3,26	0/1:9,0:3:0:0,0,0	0/0:14,0:14:3.61:0,4,116	0/0:11,0:11:16.78:0,17,129	0/0:14,1:14:17.03:0,17,163	1/1:13,8:21:7.53:188,8,0	0/0:11,0:11:18.03:0,18,195	0/0:20,0:19:27.55:0,28,307	0/0:20,0:19:29.95:0,30,301	0/0:14,0:13:24.77:0,25,227	0/0:15,0:15:22.26:0,22,218	0/0:8,1:8:18.01:0,18,193	0/0:13,0:13:29.55:0,30,304	0/1:11,6:17:21.41:88,0,21	1/1:10,11:21:4.70:73,5,0	0/1:8,2:10:2.78:20,0,3	1/1:4,6:10:14.99:136,15,0	1/1:9,9:18:23.65:207,24,0	1/1:4,1:5:2.94:24,3,0	0/0:14,0:13:19:0,19,209	0/0:18,0:18:30:0,30,273	0/0:8,0:8:16.39:0,16,166	0/0:24,0:24:32.27:0,32,288	0/0:13,0:13:16.73:0,17,163	1/1:14,9:23:21.22:210,21,0	0/0:7,0:7:17.99:0,18,182
chr10	55173589	.	GCGCACACACA	G	2921.28	PASS	AB=0.969;AC=21;AF=0.389;AN=54;BaseQRankSum=11.713;DP=506;FS=1.709;HRun=0;HaplotypeScore=193.2041;InbreedingCoeff=-0.3752;MQ=52.97;MQ0=9;MQRankSum=-9.848;QD=9.19;ReadPosRankSum=7.951;VQSLOD=2.0723;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:63.24:0,63,789	0/0:5,0:6:5.78:0,6,62	./.	0/0:7,0:3:2.97:0,3,20	0/1:19,0:19:15.29:97,0,15	0/1:19,0:19:40.91:200,0,41	0/1:28,0:27:93.98:102,0,94	0/0:20,0:20:10.14:0,10,196	0/1:21,0:21:56.90:153,0,57	0/1:21,0:20:99:277,0,150	1/1:12,0:12:12.37:219,12,0	0/1:23,0:23:21.95:197,0,22	1/1:9,0:9:3.01:59,3,0	0/1:20,0:20:93.82:341,0,94	0/1:13,0:14:39.31:39,0,95	0/1:2,10:12:10.96:107,0,11	0/0:24,0:24:35.83:0,36,754	0/0:24,0:24:23.76:0,24,270	0/1:17,0:17:99:108,0,115	0/1:22,0:22:70.50:217,0,70	0/0:34,0:32:10.60:0,11,115	0/1:11,0:11:6.96:212,0,7	0/1:10,0:9:37.29:37,0,52	0/0:22,0:22:26.95:0,27,240	0/1:16,0:16:99:156,0,101	0/1:16,0:16:99:190,0,147	0/1:16,0:16:99:231,0,121	0/1:12,0:11:66.90:138,0,67
chr10	55173591	.	GCACACACACACACACACA	G	9763.59	PASS	AB=0.902;AC=34;AF=0.654;AN=52;BaseQRankSum=8.822;DP=512;FS=2.200;HRun=0;HaplotypeScore=218.6287;InbreedingCoeff=0.4632;MQ=51.08;MQ0=15;MQRankSum=-4.663;QD=30.13;ReadPosRankSum=2.909;VQSLOD=4.0993;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:48:27.34:0,27,952	0/0:6,0:6:2.85:0,3,129	./.	./.	1/1:2,19:20:5.29:295,5,0	1/1:4,16:19:12.04:591,12,0	1/1:7,19:25:10.28:405,10,0	0/0:19,0:18:25.67:0,26,201	1/1:5,16:21:5.10:546,5,0	1/1:6,17:21:38.12:1092,38,0	1/1:0,10:10:11.59:590,12,0	1/1:3,18:21:15.05:688,15,0	1/1:0,7:7:3.01:148,3,0	1/1:6,13:19:21.07:1019,21,0	1/1:6,8:14:3.01:148,3,0	0/0:12,0:12:6.02:0,6,104	0/0:16,0:29:18.43:0,18,1095	0/0:10,0:26:12:0,12,420	0/1:16,0:16:66.65:301,0,67	0/1:23,0:23:47.80:611,0,48	0/0:34,0:31:10.82:0,11,121	1/1:2,9:11:15.04:682,15,0	1/1:7,2:8:5.98:168,6,0	1/1:18,4:22:12.02:203,12,0	0/1:5,9:14:55.97:431,0,56	1/1:7,10:16:20.25:713,20,0	0/1:18,0:18:99:688,0,105	1/1:5,7:11:9.03:444,9,0
chr10	55173607	.	ACACACACACACACACACACG	A	7535.98	PASS	AB=0.939;AC=37;AF=0.661;AN=56;BaseQRankSum=7.044;DP=487;FS=5.511;HRun=0;HaplotypeScore=196.8298;InbreedingCoeff=0.2727;MQ=46.50;MQ0=31;MQRankSum=-5.153;QD=21.72;ReadPosRankSum=3.767;VQSLOD=3.4688;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:27.96:0,28,1164	0/0:6,0:4:2.90:0,3,163	0/1:21,0:2:1.56:2,0,100	0/0:27,0:4:6.02:0,6,337	1/1:20,0:19:5.28:181,5,0	1/1:17,0:16:12.04:366,12,0	1/1:23,0:21:10.59:237,11,0	0/1:12,0:11:21.83:58,0,22	1/1:18,0:18:12.04:333,12,0	0/1:19,0:17:27.18:541,0,27	1/1:10,0:10:11.69:364,12,0	1/1:20,0:19:1.06:427,1,0	1/1:7,0:7:3.01:99,3,0	1/1:14,0:14:21.07:636,21,0	1/1:9,0:9:3.01:92,3,0	0/0:10,0:10:9.03:0,9,206	0/0:24,0:24:26.64:0,27,1471	0/0:29,0:29:13.30:0,13,1276	1/1:7,12:16:35.78:700,36,0	1/1:8,15:22:18.06:909,18,0	0/1:29,2:27:25.72:105,0,26	1/1:10,0:10:15.02:439,15,0	1/1:6,0:5:3.01:100,3,0	1/1:16,0:16:5.84:34,6,0	0/1:12,0:12:37.88:261,0,38	0/1:11,0:10:23.74:394,0,24	0/1:8,11:19:14.69:984,0,15	1/1:10,0:7:9.03:274,9,0
chr10	55174336	.	C	CT	3980.28	PASS	AB=0.705;AC=22;AF=0.393;AN=56;BaseQRankSum=-11.243;DP=714;FS=14.781;HRun=12;HaplotypeScore=89.8093;InbreedingCoeff=0.7581;MQ=79.26;MQ0=0;MQRankSum=-1.673;QD=13.58;ReadPosRankSum=-0.531;VQSLOD=2.1607;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,2:34:31.47:0,31,372	0/0:1,0:9:19.28:0,19,69	0/0:23,0:23:1.16:0,1,77	0/0:21,0:20:1.56:0,2,64	1/1:10,29:41:84.03:739,84,0	1/1:5,25:30:32.18:474,32,0	1/1:3,12:15:8.14:241,8,0	0/0:7,0:30:27.27:0,27,125	1/1:2,11:16:24.30:209,24,0	1/1:12,21:35:47.52:469,48,0	1/1:8,15:24:7.57:380,8,0	0/0:12,0:15:21.90:0,22,143	0/0:24,1:25:31.11:0,31,377	0/1:5,14:20:1.97:280,0,2	1/1:3,7:11:20.87:188,21,0	0/0:21,1:23:17.48:0,17,283	0/0:36,3:39:63.09:0,63,536	0/1:19,5:26:58.93:59,0,260	0/0:11,0:24:26.20:0,26,76	0/0:8,0:27:41.18:0,41,132	0/0:6,0:26:35.55:0,36,116	0/0:37,0:38:61.26:0,61,571	0/0:28,0:28:36.55:0,37,447	0/0:16,0:19:41.84:0,42,280	1/1:10,11:23:1.80:153,2,0	1/1:8,25:35:14.41:503,14,0	0/0:5,0:37:53.34:0,53,153	1/1:3,13:17:14.96:285,15,0
chr10	55175125	.	GTACATACATACATACA	G	4471.31	PASS	AB=1.000;AC=22;AF=0.423;AN=52;BaseQRankSum=4.928;DP=581;FS=22.994;HRun=0;HaplotypeScore=242.3912;InbreedingCoeff=0.0796;MQ=75.56;MQ0=5;MQRankSum=-7.565;QD=11.70;ReadPosRankSum=-6.417;VQSLOD=0.5534;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:20.92:0,21,208	0/0:6,0:6:3:0,3,25	./.	0/0:22,0:11:3.01:0,3,39	0/1:26,0:26:78.50:79,0,165	0/1:17,0:17:79.76:80,0,104	0/0:10,0:10:3:0,3,25	1/1:28,0:28:36.05:415,36,0	0/1:29,0:29:11.96:284,0,12	0/1:34,0:34:99:172,0,130	0/1:29,0:29:56.94:180,0,57	0/0:19,0:19:30.05:0,30,1317	0/0:14,0:15:42.10:0,42,2133	0/1:22,0:22:53.93:372,0,54	0/1:16,0:16:15.96:188,0,16	0/0:12,0:21:18.04:0,18,1072	1/1:9,0:23:3.01:88,3,0	0/1:17,0:17:19.04:19,0,131	1/1:9,3:12:8.75:142,9,0	1/1:5,27:32:24.08:1054,24,0	./.	0/0:15,0:15:33.04:0,33,953	0/0:20,0:20:48.12:0,48,1772	0/0:18,0:19:36.56:0,37,1427	0/1:31,0:31:99:166,0,167	0/1:25,0:25:99:254,0,175	1/1:5,20:25:21.07:882,21,0	1/1:16,0:16:3.01:97,3,0
chr10	55175160	.	CATACATACATATATACATACATAT	C	5714.04	PASS	AB=1.000;AC=24;AF=0.444;AN=54;BaseQRankSum=8.867;DP=537;FS=4.152;HRun=0;HaplotypeScore=247.0288;InbreedingCoeff=0.6817;MQ=55.88;MQ0=8;MQRankSum=-0.056;QD=19.84;ReadPosRankSum=1.716;VQSLOD=3.5426;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:41.32:0,41,1116	0/0:7,0:7:6.49:0,6,280	0/0:10,0:3:6.02:0,6,99	0/0:17,0:2:5.99:0,6,89	1/1:6,20:26:9.03:386,9,0	1/1:4,19:23:3.01:193,3,0	1/1:5,0:5:3.01:52,3,0	0/1:27,0:25:40.47:40,0,1028	1/1:1,31:32:9.03:580,9,0	1/1:1,25:26:51.04:955,51,0	1/1:2,17:19:6.02:384,6,0	0/0:16,0:16:42.12:0,42,2822	0/0:17,0:17:48.16:0,48,3740	1/1:2,17:19:12.04:772,12,0	1/1:0,21:21:6.02:387,6,0	0/0:15,0:15:30.10:0,30,2402	0/1:20,0:20:3.51:4,0,161	0/0:14,0:14:29.93:0,30,715	0/0:10,0:9:23.92:0,24,420	0/0:34,0:34:39.49:0,39,639	./.	0/0:11,0:11:21.06:0,21,1086	0/0:23,0:23:60.16:0,60,3117	0/0:19,0:19:30.22:0,30,2846	1/1:3,17:20:6.02:387,6,0	1/1:4,26:30:67.76:1382,68,0	0/0:25,0:25:30.53:0,31,484	1/1:0,20:20:3.01:194,3,0
chr10	55175178	.	TAC	T	63.54	PASS	AB=0.905;AC=17;AF=0.304;AN=56;BaseQRankSum=7.750;DP=534;FS=8.899;HRun=0;HaplotypeScore=122.5790;InbreedingCoeff=0.6263;MQ=57.57;MQ0=5;MQRankSum=-6.777;QD=0.31;ReadPosRankSum=5.380;VQSLOD=1.3339;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,2:23:50.38:0,50,891	0/0:9,0:9:14.08:0,14,219	0/0:13,0:6:12.03:0,12,213	0/0:9,0:3:9.03:0,9,173	0/1:20,0:20:4.97:5,0,51	1/1:19,0:19:2.84:14,3,0	0/0:6,0:6:12.04:0,12,159	0/0:35,0:33:99:0,99,1817	1/1:31,0:31:8.52:42,9,0	0/1:25,0:25:1.08:1,0,234	1/1:18,0:18:5.59:25,6,0	0/0:16,0:16:48.16:0,48,908	0/0:21,0:21:63.17:0,63,1098	1/1:17,0:17:11.32:55,11,0	1/1:21,0:21:5.68:28,6,0	0/0:18,0:18:45.15:0,45,867	0/0:19,0:19:20.97:0,21,363	0/1:9,6:15:17.53:18,0,432	0/0:12,0:11:30.04:0,30,495	0/0:38,0:38:48.76:0,49,819	0/0:13,0:13:21.07:0,21,403	0/0:7,0:7:21.05:0,21,340	0/0:20,0:20:57.18:0,57,1019	0/0:15,0:15:42.10:0,42,684	1/1:17,0:17:5.68:28,6,0	0/0:28,0:28:20.32:0,20,540	0/0:28,0:28:46.84:0,47,646	1/1:21,0:20:2.84:14,3,0
chr10	55175962	.	G	GT	135.33	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-1.869;DP=589;FS=0.000;HRun=8;HaplotypeScore=69.3194;InbreedingCoeff=0.9207;MQ=82.94;MQ0=0;MQRankSum=-1.049;QD=12.30;ReadPosRankSum=-0.424;VQSLOD=2.7384;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:95.99:0,96,868	1/1:2,9:11:21.02:227,21,0	0/0:18,0:19:51:0,51,457	0/0:14,0:14:33.01:0,33,301	0/0:27,0:27:66.02:0,66,602	0/0:21,0:21:57.03:0,57,521	0/0:14,1:15:7.40:0,7,322	0/0:25,0:25:57.01:0,57,518	0/0:19,0:19:45.02:0,45,412	0/0:24,0:24:57.01:0,57,521	0/0:16,0:16:45.02:0,45,412	0/0:33,0:33:98.81:0,99,877	0/0:23,0:23:66:0,66,592	0/0:17,0:17:45:0,45,407	0/0:20,0:20:54.03:0,54,494	0/0:13,0:13:36.02:0,36,329	0/0:27,0:27:78.02:0,78,707	0/0:20,0:20:57.02:0,57,521	0/0:19,0:19:36.01:0,36,329	0/0:25,0:25:69:0,69,622	0/0:11,0:11:33.02:0,33,302	0/0:13,0:13:36.02:0,36,329	0/0:15,0:15:39.02:0,39,357	0/0:15,0:15:42.02:0,42,384	0/0:27,0:27:75.03:0,75,686	0/0:23,0:23:66.03:0,66,604	0/0:44,0:44:99:0,117,1061	0/0:14,0:14:38.92:0,39,345
chr10	55176259	.	T	TGC	6227.04	PASS	AB=0.558;AC=18;AF=0.321;AN=56;BaseQRankSum=-11.361;DP=712;FS=1.661;HRun=0;HaplotypeScore=130.4912;InbreedingCoeff=0.6435;MQ=61.45;MQ0=17;MQRankSum=3.123;QD=23.50;ReadPosRankSum=1.878;VQSLOD=5.7903;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:77.72:0,78,626	0/0:9,0:9:5.07:0,5,156	0/0:31,0:11:24.51:0,25,267	0/0:48,0:15:25.71:0,26,213	1/1:5,23:28:8.35:443,8,0	1/1:3,19:22:18.20:491,18,0	0/1:7,25:32:17.17:568,0,17	0/0:37,0:37:94.56:0,95,764	0/1:2,21:22:2.79:311,0,3	1/1:5,31:34:59.22:1210,59,0	1/1:2,16:18:30.87:513,31,0	0/0:27,0:27:53.06:0,53,836	0/0:24,0:24:69.14:0,69,893	1/1:3,13:16:9.21:478,9,0	1/1:14,13:26:31.75:872,32,0	0/0:9,0:9:3:0,3,25	0/0:19,0:19:44.94:0,45,370	0/0:29,0:29:71.63:0,72,567	0/0:15,0:14:41.93:0,42,345	0/0:21,0:21:50.39:0,50,369	0/0:24,0:23:14.85:0,15,119	0/0:26,0:26:74.18:0,74,912	0/0:13,0:13:30.04:0,30,463	0/0:52,0:52:99:0,143,1824	0/1:8,19:24:18.48:360,0,18	1/1:14,12:26:54.40:833,54,0	0/0:25,0:24:58.37:0,58,428	0/1:2,7:9:14.46:149,0,14
chr10	55176260	.	GCACACACA	G	3816.71	PASS	AB=0.673;AC=9;AF=0.167;AN=54;BaseQRankSum=1.160;DP=712;FS=1.103;HRun=0;HaplotypeScore=198.4819;InbreedingCoeff=0.8546;MQ=61.40;MQ0=17;MQRankSum=-7.866;QD=31.28;ReadPosRankSum=-2.265;VQSLOD=3.1481;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:38:25.83:0,26,312	0/0:8,0:9:12.04:0,12,254	0/0:31,0:11:16.61:0,17,445	0/0:48,0:15:12.03:0,12,261	0/0:27,0:28:36.12:0,36,1261	0/0:23,0:23:33.11:0,33,1154	0/0:32,0:32:48.16:0,48,1690	0/1:19,18:37:1.06:1024,0,1	0/0:22,0:21:24.08:0,24,861	0/0:36,0:33:78.27:0,78,2447	0/0:16,0:18:33.01:0,33,1013	0/0:24,0:27:60.21:0,60,2284	0/0:22,0:24:69.24:0,69,2524	0/0:16,0:16:33.11:0,33,1135	0/0:27,0:26:57.20:0,57,1918	./.	0/0:1,0:19:41.95:0,42,347	0/0:9,0:29:19.69:0,20,371	1/1:7,6:14:24.08:578,24,0	1/1:6,12:21:36.12:839,36,0	1/1:13,11:23:2.46:37,2,0	0/0:24,0:27:75.24:0,75,2658	0/0:13,0:13:33.11:0,33,1290	0/0:45,0:51:99:0,132,5045	0/0:27,0:24:42.14:0,42,1489	0/0:26,0:26:63.20:0,63,1994	1/1:5,18:24:54.18:1339,54,0	0/0:9,0:9:15.05:0,15,550
chr10	55176307	.	CG	C	293.72	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.362;DP=729;FS=6.518;HRun=2;HaplotypeScore=141.1096;InbreedingCoeff=0.9428;MQ=60.65;MQ0=10;MQRankSum=-3.805;QD=26.70;ReadPosRankSum=0.116;VQSLOD=2.9117;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,108,1510	0/0:3,0:3:9.03:0,9,135	0/0:50,0:28:72.13:0,72,977	0/0:50,0:25:60.18:0,60,845	0/0:15,0:15:39.11:0,39,543	0/0:25,0:25:63.16:0,63,914	0/0:29,0:29:66.22:0,66,983	0/0:37,0:37:99:0,105,1548	0/0:17,0:17:36.12:0,36,536	0/0:24,0:23:66.21:0,66,943	0/0:19,0:19:51.14:0,51,731	0/0:24,0:24:69.23:0,69,998	0/0:25,0:25:75.23:0,75,1070	0/0:19,0:19:51.15:0,51,721	0/0:23,0:22:63.21:0,63,933	1/1:0,11:11:30.10:388,30,0	0/0:35,1:36:64.31:0,64,1359	0/0:28,0:28:72.24:0,72,1058	0/0:28,0:28:78.20:0,78,1094	0/0:20,0:20:51.11:0,51,673	0/0:35,0:35:68.64:0,69,957	0/0:22,0:22:66.21:0,66,955	0/0:17,0:17:48.16:0,48,695	0/0:50,0:50:99:0,141,2036	0/0:25,0:24:57.19:0,57,850	0/0:16,0:16:48.15:0,48,675	0/0:29,0:29:72.21:0,72,1048	0/0:12,0:12:24.08:0,24,343
chr10	55177788	.	G	GT	432.98	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=-5.162;DP=568;FS=4.457;HRun=9;HaplotypeScore=70.1740;InbreedingCoeff=0.5993;MQ=70.29;MQ0=0;MQRankSum=-0.329;QD=12.37;ReadPosRankSum=1.104;VQSLOD=3.3606;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:41.01:0,41,344	0/0:8,0:8:20.96:0,21,176	0/0:11,0:12:16.63:0,17,157	0/0:9,0:7:12.88:0,13,106	0/0:27,0:28:77.85:0,78,663	0/0:24,0:24:50.97:0,51,443	0/0:20,0:20:47.98:0,48,413	0/0:26,0:26:56.93:0,57,483	0/0:17,0:17:35.98:0,36,313	0/0:33,0:33:92.98:0,93,807	0/0:29,0:29:77.96:0,78,673	0/0:15,0:15:38.97:0,39,338	0/0:20,0:20:56.98:0,57,495	0/0:14,0:14:38.99:0,39,339	0/0:23,0:23:56.99:0,57,495	1/1:4,17:20:5.04:512,5,0	0/0:31,0:31:83.92:0,84,715	0/0:20,0:20:50.91:0,51,430	0/0:16,0:16:47.96:0,48,408	0/0:23,1:24:26.80:0,27,462	0/0:14,0:14:35.99:0,36,313	0/0:17,0:17:35.96:0,36,308	0/0:26,0:26:68.96:0,69,596	0/0:9,0:9:20.98:0,21,182	0/0:25,0:26:71.02:0,71,605	0/0:24,0:24:63.86:0,64,547	0/0:29,0:29:77.94:0,78,669	0/1:14,0:14:2.08:2,0,66
chr10	55178031	.	T	TA	4813.49	PASS	AB=0.985;AC=46;AF=0.821;AN=56;BaseQRankSum=-5.207;DP=502;FS=4.401;HRun=13;HaplotypeScore=108.7344;InbreedingCoeff=0.6762;MQ=78.57;MQ0=4;MQRankSum=0.720;QD=11.77;ReadPosRankSum=-1.811;VQSLOD=3.9441;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:33:44.48:0,44,128	1/1:3,0:7:8.52:43,9,0	0/1:31,0:19:9.82:10,0,94	0/0:22,0:18:13.80:0,14,61	1/1:7,2:21:40.90:262,41,0	1/1:3,1:17:31.83:187,32,0	1/1:4,2:12:26.22:170,26,0	1/1:9,19:30:14.68:428,15,0	1/1:1,0:8:19.89:101,20,0	1/1:6,2:19:34.26:194,34,0	1/1:6,2:19:36.01:209,36,0	1/1:2,13:16:34.01:296,34,0	1/1:2,15:18:18.30:300,18,0	1/1:1,2:9:14.66:106,15,0	1/1:6,0:16:22.88:126,23,0	0/1:11,0:11:10.06:10,0,83	0/0:3,0:21:37.59:0,38,120	0/0:3,0:17:30.39:0,30,111	1/1:5,11:18:3.69:299,4,0	1/1:6,15:21:41.98:375,42,0	1/1:6,12:18:24.03:223,24,0	1/1:3,3:7:5.96:47,6,0	1/1:5,9:15:30.34:266,30,0	1/1:2,9:12:6.30:189,6,0	1/1:5,2:19:28.69:162,29,0	1/1:7,5:31:67.93:417,68,0	1/1:3,12:16:27.39:236,27,0	1/1:6,3:16:8.72:160,9,0
chr10	55178230	.	A	ATT	2873.51	PASS	AB=0.532;AC=32;AF=0.571;AN=56;BaseQRankSum=4.195;DP=568;FS=2.527;HRun=9;HaplotypeScore=118.6456;InbreedingCoeff=0.8578;MQ=75.86;MQ0=0;MQRankSum=-1.393;QD=7.54;ReadPosRankSum=-1.731;VQSLOD=0.4522;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:69.17:0,69,733	0/0:11,0:11:33.08:0,33,351	0/0:11,0:11:14.35:0,14,187	0/0:13,0:14:18.92:0,19,266	1/1:2,0:24:18.96:142,19,0	1/1:5,0:21:37.31:128,37,0	1/1:6,0:21:34.93:120,35,0	1/1:8,0:24:38.43:159,38,0	1/1:2,0:19:39.80:137,40,0	1/1:0,0:24:57.77:203,58,0	1/1:4,0:15:29.27:99,29,0	0/0:18,0:18:54.14:0,54,575	0/0:17,0:17:48.12:0,48,511	1/1:4,0:20:39.25:133,39,0	1/1:1,0:20:44.92:154,45,0	1/1:6,11:17:33.11:501,33,0	0/0:29,0:29:75.12:0,75,788	0/0:15,0:15:39.08:0,39,406	1/1:6,1:26:55.99:239,56,0	1/1:2,1:26:36.52:217,37,0	0/1:3,0:22:12.93:103,0,13	0/0:11,0:11:30.06:0,30,319	0/0:12,0:13:32.80:0,33,331	0/0:23,0:24:40.49:0,40,615	1/1:3,1:24:50.30:209,50,0	1/1:1,0:34:79.85:274,80,0	0/1:2,0:19:11.21:91,0,11	1/1:1,0:25:54.90:188,55,0
chr10	55179714	.	T	TTTCC	19215.02	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-0.210;DP=709;FS=32.441;HRun=0;HaplotypeScore=133.2933;InbreedingCoeff=0.8292;MQ=65.59;MQ0=3;MQRankSum=-0.873;QD=28.94;ReadPosRankSum=2.704;VQSLOD=2.6808;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:33,0:33:45.15:824,45,0	1/1:2,0:10:12.04:209,12,0	0/0:25,0:23:17.71:0,18,237	0/0:20,0:17:6.02:0,6,89	1/1:9,25:34:72.12:1475,72,0	1/1:14,15:29:24.08:576,24,0	1/1:12,15:27:36.12:844,36,0	1/1:22,10:33:33.10:651,33,0	1/1:11,11:22:21.07:500,21,0	1/1:10,21:33:66.15:1388,66,0	1/1:10,19:31:57.15:1233,57,0	1/1:21,0:21:15.05:252,15,0	1/1:19,0:18:9.03:152,9,0	1/1:9,16:26:45.15:1059,45,0	1/1:8,19:28:36.12:865,36,0	1/1:11,16:29:33.11:792,33,0	1/1:34,0:34:57.20:1049,57,0	1/1:17,0:17:36.12:654,36,0	1/1:14,4:17:15.04:313,15,0	1/1:7,20:28:60.05:1232,60,0	1/1:4,16:21:27.09:649,27,0	1/1:16,0:16:9.03:144,9,0	1/1:22,0:22:24.04:374,24,0	1/1:27,0:27:11.94:142,12,0	1/1:9,16:27:36.12:865,36,0	1/1:11,23:34:72.25:1691,72,0	1/1:8,16:25:39.13:920,39,0	1/1:13,6:19:15.05:360,15,0
chr10	55179718	.	C	CTTCCTTCCTTCCTTCT	5280.50	PASS	AB=1.000;AC=12;AF=0.214;AN=56;BaseQRankSum=-6.811;DP=742;FS=0.000;HRun=0;HaplotypeScore=311.9440;InbreedingCoeff=0.8117;MQ=62.61;MQ0=3;MQRankSum=-0.186;QD=26.54;ReadPosRankSum=-3.799;VQSLOD=2.2502;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:60.12:0,60,908	0/1:9,0:9:1.94:461,0,2	0/0:22,0:20:25.77:0,26,648	0/0:20,0:16:12:0,12,240	0/1:35,0:35:1.17:1,0,614	0/0:30,0:30:45:0,45,435	0/0:28,0:28:36.67:0,37,527	0/0:31,0:31:27.05:0,27,314	0/0:19,0:19:33.06:0,33,357	0/0:32,0:32:4.22:0,4,618	0/0:31,0:31:34.02:0,34,644	1/1:5,13:30:15.05:1131,15,0	1/1:2,16:31:9.03:690,9,0	0/0:26,0:26:44.21:0,44,606	0/0:26,0:26:41.84:0,42,481	0/0:28,0:28:48.09:0,48,522	0/0:37,0:37:60.18:0,60,1025	0/0:18,0:18:36.07:0,36,593	0/0:18,0:16:27.03:0,27,271	0/0:28,0:28:63.29:0,63,687	0/0:17,0:17:27.08:0,27,319	1/1:6,9:27:23.90:797,24,0	1/1:3,19:36:32.11:1863,32,0	1/1:6,19:30:8.98:337,9,0	0/0:26,0:26:48.03:0,48,524	0/0:32,0:32:45.27:0,45,803	0/0:23,0:23:39.12:0,39,478	0/0:18,0:18:32.98:0,33,311
chr10	55179738	.	C	CTTCT	13181	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=9.351;DP=692;FS=29.658;HRun=0;HaplotypeScore=131.4216;InbreedingCoeff=-0.6407;MQ=58.61;MQ0=5;MQRankSum=-1.825;QD=20.15;ReadPosRankSum=16.064;VQSLOD=1.4401;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:5,25:31:43.58:1208,44,0	0/1:6,0:6:9.95:121,0,10	0/0:20,0:14:25.19:0,25,427	0/0:18,0:11:16.53:0,17,229	0/1:40,0:40:99:851,0,218	0/1:27,0:27:99:331,0,174	0/1:25,0:25:99:551,0,100	0/1:28,0:28:99:275,0,275	0/1:19,0:19:87.82:289,0,88	0/1:38,0:38:99:696,0,318	0/1:32,0:32:99:719,0,195	0/1:19,0:19:54.92:135,0,55	0/1:26,0:25:72.96:73,0,108	0/1:23,0:23:89.71:651,0,90	0/1:24,0:24:50.78:507,0,51	0/1:27,0:27:99:454,0,148	1/1:1,33:34:57.20:1534,57,0	1/1:0,20:22:36.12:969,36,0	0/1:20,0:17:99:139,0,202	0/1:33,0:33:99:693,0,167	0/1:23,0:23:99:373,0,109	0/1:19,0:19:60.67:71,0,61	0/1:26,0:26:46.22:204,0,46	0/1:18,0:18:98.82:99,0,102	0/1:25,0:25:74.36:511,0,74	0/1:36,0:36:99:970,0,171	0/1:22,0:22:47.82:550,0,48	0/1:11,0:11:91.82:205,0,92
chr10	55180624	.	GA	G	6741.86	PASS	AB=0.789;AC=29;AF=0.518;AN=56;BaseQRankSum=9.632;DP=672;FS=5.438;HRun=11;HaplotypeScore=73.5492;InbreedingCoeff=0.7526;MQ=72.01;MQ0=0;MQRankSum=1.122;QD=16.56;ReadPosRankSum=3.076;VQSLOD=5.8316;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,40:45:99:837,102,0	0/0:7,0:12:26.23:0,26,187	0/0:16,0:16:19.27:0,19,180	0/1:13,2:14:32.08:32,0,135	0/0:31,3:34:4.28:0,4,621	0/0:20,1:21:32.50:0,32,550	0/1:19,2:21:1.30:1,0,383	1/1:4,25:31:72.73:577,73,0	0/0:21,2:23:26.45:0,26,471	0/0:25,1:27:38.32:0,38,576	0/0:25,0:29:65.92:0,66,646	1/1:1,21:23:61.96:497,62,0	1/1:1,16:18:12.01:294,12,0	0/0:16,0:17:14.75:0,15,359	0/0:28,3:31:4.22:0,4,649	1/1:3,20:24:61.95:498,62,0	1/1:2,34:37:94.86:769,95,0	1/1:4,20:25:23.59:370,24,0	0/1:6,16:24:33.38:345,0,33	1/1:6,18:24:38.87:320,39,0	1/1:7,14:22:43.96:351,44,0	1/1:5,22:27:51.75:420,52,0	1/1:4,15:19:38.94:320,39,0	1/1:4,22:26:65.90:542,66,0	0/0:17,0:17:42.08:0,42,433	0/0:26,1:27:41.51:0,42,641	1/1:2,24:26:68.90:566,69,0	0/0:10,1:11:5.41:0,5,255
chr10	55182445	.	T	TA	5750.08	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-15.148;DP=594;FS=7.647;HRun=1;HaplotypeScore=74.1395;InbreedingCoeff=0.9872;MQ=90.65;MQ0=0;MQRankSum=-1.545;QD=41.07;ReadPosRankSum=0.197;VQSLOD=5.0252;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:72.20:0,72,917	1/1:0,5:5:15.05:225,15,0	0/0:18,0:18:54.04:0,54,676	0/0:28,0:28:72.18:0,72,885	0/0:15,0:15:45.15:0,45,582	0/0:12,0:12:36.12:0,36,467	0/0:33,0:33:96.31:0,96,1246	1/1:3,19:22:54.18:805,54,0	0/0:16,0:16:48.16:0,48,623	0/0:15,0:15:45.14:0,45,573	0/0:5,0:5:15.03:0,15,180	0/0:31,0:31:93.29:0,93,1189	0/0:23,0:23:69.22:0,69,895	0/0:21,0:21:63.19:0,63,804	0/0:25,0:25:72.20:0,72,904	0/0:15,0:15:45.15:0,45,584	0/0:35,0:35:99:0,102,1325	0/0:38,0:38:99:0,108,1402	1/1:1,19:20:57.19:854,57,0	1/1:0,11:11:33.11:495,33,0	1/1:0,70:70:99:2833,190,0	0/0:13,0:13:39.13:0,39,506	0/0:11,0:11:33.09:0,33,414	0/0:32,0:32:90.29:0,90,1169	0/0:14,0:14:39.13:0,39,506	0/0:24,0:24:69.22:0,69,896	1/1:0,12:11:36.12:539,36,0	0/0:4,0:4:12.04:0,12,156
chr10	55182760	.	CA	C	5083.44	PASS	AB=1.000;AC=36;AF=0.643;AN=56;BaseQRankSum=16.355;DP=673;FS=7.386;HRun=1;HaplotypeScore=105.4307;InbreedingCoeff=0.7131;MQ=83.72;MQ0=0;MQRankSum=-3.028;QD=10.23;ReadPosRankSum=8.566;VQSLOD=2.1429;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:40,1:41:80.46:467,80,0	0/0:8,0:8:24.08:0,24,375	0/0:24,0:23:66.19:0,66,945	0/0:17,0:16:48.08:0,48,609	1/1:15,1:16:14.41:150,14,0	1/1:18,0:18:44.62:210,45,0	0/1:25,0:25:8.22:206,0,8	0/0:25,0:25:63.19:0,63,962	1/1:33,1:34:87.41:462,87,0	0/1:26,0:26:38.61:144,0,39	1/1:10,1:11:25.41:152,25,0	1/1:36,0:36:55.20:390,55,0	1/1:22,0:22:38.32:258,38,0	1/1:27,0:27:20.54:271,21,0	1/1:28,0:28:46.06:305,46,0	1/1:29,0:29:44.31:281,44,0	1/1:41,0:41:59.64:435,60,0	1/1:34,0:33:47.20:352,47,0	0/0:26,0:26:72.16:0,72,1001	0/0:9,0:9:16.03:0,16,297	0/0:44,0:44:99:0,115,1775	1/1:18,0:18:25.29:126,25,0	1/1:15,0:15:14.85:142,15,0	1/1:36,0:36:69.38:383,69,0	1/1:19,0:19:41.52:192,42,0	0/1:14,0:14:13.77:90,0,14	0/0:23,0:22:66.21:0,66,1007	0/1:7,0:7:4.03:64,0,4
chr10	55182761	.	AC	A	15582.37	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=8.989;DP=671;FS=15.067;HRun=3;HaplotypeScore=70.0552;InbreedingCoeff=0.9973;MQ=82.69;MQ0=0;MQRankSum=-4.249;QD=31.35;ReadPosRankSum=7.030;VQSLOD=3.0750;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,39:41:99:1338,108,0	0/0:9,0:9:24.08:0,24,345	0/0:23,0:22:57.17:0,57,771	0/0:16,0:15:42.14:0,42,569	1/1:3,14:17:39.11:472,39,0	1/1:1,18:19:48.15:595,48,0	1/1:2,22:24:60.19:743,60,0	0/0:24,0:24:63.19:0,63,891	1/1:3,32:35:93.29:1151,93,0	1/1:5,22:27:60.19:738,60,0	1/1:2,9:11:22.83:293,23,0	1/1:2,34:36:96.30:1185,96,0	1/1:1,21:22:63.20:777,63,0	1/1:1,25:26:69.22:855,69,0	1/1:1,27:28:72.23:892,72,0	1/1:1,28:29:72.23:892,72,0	1/1:1,39:40:99:1339,108,0	1/1:3,32:35:90.28:1116,90,0	0/0:24,0:24:72.19:0,72,947	0/0:11,0:11:24.01:0,24,286	0/0:44,0:44:99:0,129,1728	1/1:1,17:18:27.08:334,27,0	1/1:1,14:15:39.12:483,39,0	1/1:0,35:35:93.29:1153,93,0	1/1:1,19:20:45.14:558,45,0	1/1:0,13:13:36.11:446,36,0	0/0:23,0:22:66.21:0,66,932	1/1:0,6:6:18.06:223,18,0
chr10	55182962	.	A	AG	20937.34	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-12.694;DP=794;FS=2.359;HRun=5;HaplotypeScore=74.2380;InbreedingCoeff=0.9991;MQ=85.67;MQ0=0;MQRankSum=-5.820;QD=34.16;ReadPosRankSum=5.843;VQSLOD=4.6235;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,45:48:99:1657,126,0	0/0:10,0:10:21.05:0,21,225	0/0:25,0:24:54.06:0,54,557	0/0:28,0:28:59.18:0,59,629	1/1:4,15:19:45.15:588,45,0	1/1:1,22:23:63.20:828,63,0	1/1:4,37:41:99:1319,102,0	0/0:21,0:21:57.14:0,57,613	1/1:0,35:35:96.24:1241,96,0	1/1:5,23:28:72.23:942,72,0	1/1:0,21:21:60.11:765,60,0	1/1:4,37:41:99:1339,102,0	1/1:3,32:35:87.28:1144,87,0	1/1:2,25:27:69.06:907,69,0	1/1:2,32:34:90.29:1184,90,0	1/1:1,20:21:57.18:744,57,0	1/1:2,43:45:99:1500,114,0	1/1:4,31:35:84.27:1102,84,0	0/0:20,0:20:48.12:0,48,516	0/0:18,0:18:48.12:0,48,516	0/0:34,0:34:99:0,99,1037	1/1:1,21:22:60.19:787,60,0	1/1:3,18:21:60.18:764,60,0	1/1:1,46:47:99:1658,126,0	1/1:2,27:29:81.26:1066,81,0	1/1:2,27:29:81.24:1046,81,0	0/0:25,0:25:63.16:0,63,677	1/1:3,9:12:27.09:355,27,0
chr10	55183895	.	A	AGT	18302.29	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-13.065;DP=738;FS=5.266;HRun=0;HaplotypeScore=91.7674;InbreedingCoeff=0.9995;MQ=83.47;MQ0=0;MQRankSum=-4.494;QD=47.05;ReadPosRankSum=6.380;VQSLOD=5.6555;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,34:40:99:1946,108,0	0/0:11,0:11:33.11:0,33,473	0/0:28,0:27:75.16:0,75,995	0/0:21,0:21:56.98:0,57,774	1/1:2,18:20:45.15:815,45,0	1/1:4,20:24:60.21:1097,60,0	1/1:4,29:33:72.25:1316,72,0	0/0:50,0:50:99:0,135,1917	1/1:4,20:24:60.21:1099,60,0	1/1:3,36:40:99:1971,111,0	1/1:2,17:19:38.65:714,39,0	0/0:31,0:31:90.29:0,90,1271	0/0:26,0:26:72.24:0,72,1030	1/1:3,35:38:99:1972,108,0	1/1:8,36:44:99:2149,120,0	1/1:3,25:28:72.25:1320,72,0	1/1:0,17:17:48.16:880,48,0	1/1:0,10:10:27.09:495,27,0	0/0:17,0:17:48.16:0,48,686	0/0:15,0:15:39.12:0,39,539	0/0:47,0:47:99:0,129,1841	0/0:22,0:22:66.22:0,66,943	0/0:20,0:20:60.20:0,60,844	0/0:34,0:34:84.25:0,84,1165	1/1:5,14:19:51.17:923,51,0	1/1:5,17:23:66.23:1165,66,0	0/0:27,0:27:75.25:0,75,1075	1/1:1,8:9:24.08:440,24,0
chr10	55183970	.	GC	G	12401.63	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=17.940;DP=707;FS=5.629;HRun=5;HaplotypeScore=104.0548;InbreedingCoeff=1.0000;MQ=85.30;MQ0=0;MQRankSum=-5.291;QD=31.80;ReadPosRankSum=4.265;VQSLOD=4.7290;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,33:35:93.26:1055,93,0	0/0:16,0:16:45.15:0,45,616	0/0:20,0:20:55.23:0,55,756	0/0:29,0:29:72.08:0,72,874	1/1:0,24:24:66.19:749,66,0	1/1:1,25:26:69.20:783,69,0	1/1:4,18:22:57.16:646,57,0	0/0:29,0:29:72.20:0,72,962	1/1:1,22:23:63.18:714,63,0	1/1:1,22:23:66.19:749,66,0	1/1:0,34:34:99:1123,99,0	0/0:25,0:25:75.25:0,75,1026	0/0:27,0:27:75.25:0,75,1025	1/1:7,25:32:93.25:1043,93,0	1/1:2,37:39:99:1254,111,0	1/1:0,14:14:42.12:476,42,0	1/1:0,19:19:54.15:613,54,0	1/1:0,17:16:48.14:544,48,0	0/0:29,0:29:78.16:0,78,1006	0/0:31,0:31:90.30:0,90,1231	0/0:26,0:26:72.22:0,72,968	0/0:23,0:23:69.23:0,69,938	0/0:18,0:18:51.17:0,51,698	0/0:21,0:21:57.14:0,57,728	1/1:0,28:28:81.23:919,81,0	1/1:2,34:36:99:1157,102,0	0/0:23,0:23:69.21:0,69,923	1/1:1,17:18:51.15:578,51,0
chr10	55184183	.	TTTTG	T	5256.19	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=0.451;DP=646;FS=0.391;HRun=0;HaplotypeScore=158.4292;InbreedingCoeff=0.9944;MQ=72.28;MQ0=0;MQRankSum=-12.833;QD=41.39;ReadPosRankSum=-1.514;VQSLOD=4.8985;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:18.06:0,18,419	1/1:0,6:6:18.06:309,18,0	0/0:42,0:31:48.60:0,49,942	0/0:41,0:34:60.15:0,60,1343	0/0:21,0:21:57.20:0,57,1365	0/0:29,0:29:63.20:0,63,1437	0/0:16,0:16:24.08:0,24,571	1/1:7,21:28:75.23:1211,75,0	0/0:31,0:31:75.24:0,75,1820	0/0:23,0:23:66.21:0,66,1537	0/0:24,0:24:57.19:0,57,1357	0/0:25,0:25:66.21:0,66,1560	0/0:18,0:18:48.16:0,48,1156	0/0:21,0:21:42.12:0,42,986	0/0:23,0:23:54.19:0,54,1306	0/0:18,0:18:48.16:0,48,1171	0/0:24,0:24:39.97:0,40,1084	0/0:21,0:20:45.08:0,45,956	1/1:6,12:18:36.11:592,36,0	1/1:3,24:27:75.12:1169,75,0	1/1:6,6:12:18:251,18,0	0/0:15,0:15:39.12:0,39,859	0/0:23,0:23:57.19:0,57,1351	0/0:23,0:23:60.21:0,60,1484	0/0:23,0:23:63.22:0,63,1523	0/0:25,0:25:69.24:0,69,1689	1/1:6,30:36:99:1725,102,0	0/0:9,0:9:27.09:0,27,676
chr10	55184205	.	G	GTTT	1045.84	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-0.048;DP=679;FS=0.000;HRun=0;HaplotypeScore=172.6228;InbreedingCoeff=0.9753;MQ=72.10;MQ0=1;MQRankSum=-3.804;QD=15.38;ReadPosRankSum=-1.117;VQSLOD=2.7874;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:28:8.85:109,9,0	0/0:8,0:8:20.79:0,21,229	0/0:46,0:32:48.91:0,49,1134	0/0:50,0:42:95.52:0,96,1492	0/0:20,0:20:56.64:0,57,640	0/0:23,0:23:63.20:0,63,820	0/0:18,0:18:39.10:0,39,509	0/0:32,0:32:93.18:0,93,1056	0/0:27,0:27:69.22:0,69,874	0/0:26,0:26:75.14:0,75,918	0/0:23,0:23:62.74:0,63,777	0/0:24,0:24:72.20:0,72,1251	0/0:20,0:20:60.19:0,60,1059	0/0:18,0:18:36.08:0,36,436	0/0:26,0:26:65.89:0,66,833	0/0:25,0:25:64.76:0,65,450	1/1:6,13:22:26.74:448,27,0	1/1:7,8:17:37.59:627,38,0	0/0:24,0:23:59.91:0,60,718	0/0:26,0:26:78.01:0,78,847	0/0:10,0:10:23.75:0,24,265	0/0:17,0:17:48.14:0,48,831	0/0:21,0:21:63.19:0,63,1138	0/0:20,0:20:60.16:0,60,1041	0/0:21,0:21:57.18:0,57,769	0/0:29,0:29:83.48:0,83,1104	0/0:41,0:41:99:0,123,1347	0/0:15,0:15:39.03:0,39,475
chr10	55184206	.	G	GTT	4323.06	PASS	AB=0.703;AC=39;AF=0.696;AN=56;BaseQRankSum=9.921;DP=690;FS=3.113;HRun=9;HaplotypeScore=152.4662;InbreedingCoeff=0.7781;MQ=71.81;MQ0=1;MQRankSum=-4.013;QD=8.82;ReadPosRankSum=2.298;VQSLOD=1.5561;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:33:11.72:191,12,0	1/1:2,1:9:15.36:89,15,0	0/0:45,0:32:17.08:0,17,520	0/0:48,0:42:70.28:0,70,656	1/1:1,2:19:15:200,15,0	1/1:3,0:25:18.36:131,18,0	0/1:3,1:18:3.45:95,0,3	1/1:12,0:34:57.11:218,57,0	1/1:2,0:27:57.14:196,57,0	1/1:3,0:25:26.49:172,26,0	1/1:2,1:23:45.17:209,45,0	0/0:22,0:24:68.65:0,69,694	0/0:19,0:20:47.83:0,48,490	1/1:2,1:18:27.84:131,28,0	1/1:0,0:27:54.90:189,55,0	1/1:1,24:26:62.37:897,62,0	0/1:21,0:21:0.73:246,0,1	1/1:16,0:16:36.07:372,36,0	1/1:6,1:23:10.34:133,10,0	1/1:9,0:26:13.97:125,14,0	1/1:6,1:10:10.97:83,11,0	0/0:17,0:17:48.09:0,48,495	0/0:20,0:21:40.24:0,40,596	0/0:21,0:21:48.11:0,48,511	0/1:5,0:22:20.04:85,0,20	1/1:6,0:29:21.85:155,22,0	1/1:8,1:42:27.36:275,27,0	1/1:2,1:15:27.96:132,28,0
chr10	55184985	.	GGCTGTGGTTTT	G	12548.82	PASS	AB=0.952;AC=23;AF=0.411;AN=56;BaseQRankSum=15.596;DP=569;FS=14.266;HRun=0;HaplotypeScore=196.1964;InbreedingCoeff=0.8993;MQ=81.67;MQ0=0;MQRankSum=-15.284;QD=61.82;ReadPosRankSum=3.145;VQSLOD=3.6219;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,108,5834	0/0:11,0:11:33.11:0,33,1597	0/0:25,0:25:19.80:0,20,2786	0/0:17,0:17:48.08:0,48,2145	1/1:2,16:18:29.65:886,30,0	1/1:2,17:19:39.13:1324,39,0	1/1:1,21:22:48.16:1690,48,0	0/0:25,0:25:69.24:0,69,3544	1/1:1,11:12:26.63:951,27,0	1/1:4,13:17:39.13:1276,39,0	1/1:3,10:14:21.54:740,22,0	0/0:19,0:19:57.20:0,57,3200	0/0:27,0:27:78.27:0,78,4111	1/1:1,18:19:51.18:1769,51,0	1/1:3,18:21:45.11:1502,45,0	0/1:19,1:20:48.33:48,0,2936	0/0:35,0:35:99:0,99,5010	0/0:15,0:15:36.12:0,36,1944	0/0:17,0:17:48.16:0,48,2466	0/0:20,0:20:42.14:0,42,2365	0/0:40,0:40:99:0,120,6344	0/0:21,0:21:57.18:0,57,2986	0/0:11,0:11:27.09:0,27,1357	0/0:25,0:25:75.26:0,75,3912	1/1:4,14:18:27.09:937,27,0	1/1:4,13:17:39.13:1320,39,0	0/0:19,0:19:57.20:0,57,3135	1/1:2,4:6:3.01:106,3,0
chr10	55193104	.	A	ACC	8829.65	PASS	AB=1.000;AC=33;AF=0.589;AN=56;BaseQRankSum=3.053;DP=611;FS=2.123;HRun=7;HaplotypeScore=98.0067;InbreedingCoeff=0.9316;MQ=73.37;MQ0=14;MQRankSum=-4.768;QD=25.82;ReadPosRankSum=-1.508;VQSLOD=4.0704;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:69.20:0,69,802	0/0:8,0:8:24.06:0,24,271	0/1:65,0:25:4.46:4,0,298	0/0:74,0:35:22.34:0,22,429	1/1:3,8:13:18.06:293,18,0	1/1:3,15:17:39.13:631,39,0	1/1:5,22:29:38.08:911,38,0	1/1:1,16:17:42.12:641,42,0	1/1:2,12:15:33.11:530,33,0	1/1:4,8:11:24.08:383,24,0	1/1:5,6:11:15.03:244,15,0	0/0:26,0:26:66.18:0,66,758	0/0:20,0:20:57.17:0,57,662	1/1:3,6:11:12.04:195,12,0	1/1:6,21:28:57.67:919,58,0	0/0:13,0:13:33.10:0,33,384	0/0:28,0:28:57.15:0,57,664	0/0:14,0:13:36.11:0,36,419	1/1:5,20:25:63.21:1016,63,0	1/1:9,14:23:51.17:826,51,0	1/1:4,10:14:33.11:538,33,0	0/0:15,0:15:42.12:0,42,487	0/0:13,0:13:33.09:0,33,382	0/0:31,0:31:90.21:0,90,1021	1/1:4,6:11:18.01:227,18,0	1/1:5,18:23:51.14:740,51,0	1/1:5,9:15:36.08:556,36,0	1/1:4,3:8:12.04:176,12,0
chr10	55193143	.	AACC	A	2819.24	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=7.769;DP=600;FS=2.186;HRun=0;HaplotypeScore=126.7971;InbreedingCoeff=0.9644;MQ=68.92;MQ0=5;MQRankSum=-3.827;QD=25.40;ReadPosRankSum=-0.906;VQSLOD=3.7241;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:24:33.09:0,33,419	0/0:2,0:3:6.01:0,6,64	0/0:43,0:25:33.91:0,34,480	0/0:58,0:45:61.03:0,61,1041	0/0:15,0:15:21.07:0,21,414	0/0:20,0:20:51.16:0,51,976	0/0:37,0:37:78.27:0,78,1508	1/1:15,8:23:44.55:519,45,0	0/0:17,0:17:42.14:0,42,832	0/0:17,0:17:42.10:0,42,799	0/0:6,0:6:15.05:0,15,276	0/0:29,0:29:69.18:0,69,1169	0/0:18,0:18:42.14:0,42,842	0/0:16,0:16:33.10:0,33,651	0/0:24,0:24:54.17:0,54,1054	0/0:17,0:17:48.16:0,48,932	0/0:7,0:33:69.66:0,70,861	0/0:4,0:17:30.10:0,30,395	1/1:18,8:26:36.10:464,36,0	1/1:9,10:19:51.10:685,51,0	1/1:7,10:17:26.35:377,26,0	0/0:8,0:8:21.07:0,21,396	0/0:9,0:9:18:0,18,285	0/0:38,0:38:99:0,102,2003	0/0:12,0:11:27.09:0,27,490	0/0:20,0:20:45.15:0,45,879	1/1:6,20:26:72.18:948,72,0	0/0:6,0:6:15.05:0,15,303
chr10	55193957	.	AG	A	9240.35	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=22.088;DP=751;FS=0.566;HRun=1;HaplotypeScore=123.8391;InbreedingCoeff=1.0000;MQ=85.49;MQ0=0;MQRankSum=-6.144;QD=30.80;ReadPosRankSum=1.723;VQSLOD=4.6335;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,117,1841	1/1:1,11:12:36.06:398,36,0	0/0:28,0:28:84.28:0,84,1325	0/0:24,0:24:72.25:0,72,1150	0/0:34,0:34:99:0,102,1580	0/0:35,0:35:99:0,102,1605	0/0:29,0:29:87.28:0,87,1365	1/1:3,24:27:70.08:791,70,0	0/0:23,0:23:69.24:0,69,1095	0/0:26,0:26:78.25:0,78,1187	0/0:23,0:23:69.24:0,69,1099	1/1:3,22:25:73.73:816,74,0	1/1:1,31:32:85.08:957,85,0	0/0:28,0:28:81.28:0,81,1295	0/0:38,0:38:99:0,114,1754	0/0:21,0:21:63.20:0,63,982	0/0:18,0:18:54.18:0,54,860	0/0:20,0:20:54.12:0,54,790	1/1:6,18:24:58.13:631,58,0	1/1:2,30:32:91.10:1017,91,0	1/1:3,29:32:85.97:953,86,0	1/1:0,27:27:78.22:895,78,0	1/1:0,22:22:60.15:682,60,0	1/1:0,27:27:72.20:829,72,0	0/0:25,0:25:75.26:0,75,1197	0/0:27,0:27:81.27:0,81,1274	1/1:3,37:40:99:1271,111,0	0/0:13,0:13:39.13:0,39,623
chr10	55194710	.	T	TG	1087.48	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=8.102;DP=725;FS=7.194;HRun=1;HaplotypeScore=70.5869;InbreedingCoeff=0.9998;MQ=84.62;MQ0=0;MQRankSum=-2.026;QD=32.95;ReadPosRankSum=2.565;VQSLOD=3.0920;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,123,1597	0/0:12,0:12:36.12:0,36,467	0/0:28,0:28:78.22:0,78,969	0/0:29,0:29:78.70:0,79,1016	0/0:22,0:22:63.18:0,63,789	0/0:19,0:19:57.19:0,57,740	0/0:25,0:25:66.21:0,66,856	0/0:33,0:33:90.28:0,90,1144	0/0:32,0:32:93.30:0,93,1207	0/0:25,0:25:75.24:0,75,974	0/0:21,0:21:63.19:0,63,804	0/0:26,0:26:78.25:0,78,1013	0/0:21,0:21:60.18:0,60,764	0/0:24,0:24:72.22:0,72,919	0/0:31,0:31:90.28:0,90,1155	1/1:2,31:33:51.54:1182,52,0	0/0:16,0:16:48.16:0,48,623	0/0:20,0:20:57.19:0,57,740	0/0:30,0:30:81.23:0,81,1023	0/0:23,0:23:66.19:0,66,836	0/0:26,0:26:78.25:0,78,1012	0/0:23,0:23:66.20:0,66,843	0/0:24,0:24:72.23:0,72,935	0/0:30,0:30:90.25:0,90,1150	0/0:32,0:32:93.30:0,93,1206	0/0:24,0:24:72.23:0,72,935	0/0:41,0:41:99:0,123,1567	0/0:13,0:13:39.05:0,39,469
chr10	55195060	.	C	CT	8046.11	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-14.165;DP=942;FS=0.951;HRun=1;HaplotypeScore=106.7627;InbreedingCoeff=0.9990;MQ=84.24;MQ0=0;MQRankSum=-2.318;QD=40.43;ReadPosRankSum=-3.608;VQSLOD=3.7223;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:59.17:0,59,919	1/1:0,7:7:21.07:315,21,0	0/0:30,0:31:52.81:0,53,1005	0/0:26,0:26:60.15:0,60,746	0/0:30,0:30:87.28:0,87,1128	0/0:28,0:28:81.25:0,81,1036	0/0:38,0:38:99:0,111,1408	1/1:2,36:38:99:1598,108,0	0/0:38,0:38:99:0,105,1335	0/0:41,0:41:99:0,123,1597	0/0:24,0:24:72.23:0,72,933	0/0:54,0:54:99:0,163,2100	0/0:52,0:52:99:0,153,1969	0/0:38,0:38:99:0,114,1480	0/0:45,0:45:99:0,132,1714	0/0:50,0:50:99:0,150,1947	0/0:29,0:29:81.26:0,81,1051	0/0:28,0:28:72.23:0,72,932	1/1:1,26:27:78.18:1098,78,0	1/1:0,28:28:84.28:1259,84,0	1/1:2,48:50:99:1844,123,0	0/0:38,0:38:99:0,114,1438	0/0:30,0:30:84.27:0,84,1090	0/0:38,0:38:99:0,111,1441	0/0:21,0:20:54.17:0,54,700	0/0:29,0:29:81.26:0,81,1050	1/1:2,47:47:99:1933,129,0	0/0:10,0:10:27.09:0,27,350
chr10	55195221	.	C	CAG	4555.84	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=2.165;DP=832;FS=1.383;HRun=0;HaplotypeScore=196.0659;InbreedingCoeff=0.9993;MQ=80.44;MQ0=0;MQRankSum=-13.208;QD=44.67;ReadPosRankSum=-2.151;VQSLOD=4.0202;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,32:39:96.31:1738,96,0	0/0:13,0:13:33.11:0,33,486	0/0:32,0:32:90.28:0,90,1260	0/0:34,0:34:99:0,99,1440	1/1:2,23:25:63.20:1133,63,0	0/0:23,0:23:60.20:0,60,883	0/0:24,0:24:63.20:0,63,905	0/0:42,0:42:99:0,105,1494	0/0:30,0:30:84.24:0,84,1204	0/0:31,0:31:90.30:0,90,1309	0/0:28,0:28:81.17:0,81,1161	0/0:41,0:41:99:0,111,1606	0/0:39,0:39:99:0,108,1569	0/0:27,0:27:78.22:0,78,1079	0/0:43,0:43:99:0,126,1851	0/0:35,0:35:99:0,99,1456	1/1:4,15:19:48.16:895,48,0	1/1:6,12:18:45.13:789,45,0	0/0:24,0:24:63.20:0,63,909	0/0:32,0:30:78.25:0,78,1128	0/0:36,0:36:99:0,102,1498	0/0:28,0:28:78.26:0,78,1137	0/0:31,0:31:81.27:0,81,1187	0/0:41,0:41:99:0,114,1674	0/0:24,0:24:57.18:0,57,821	0/0:28,0:28:81.27:0,81,1192	0/0:33,0:32:90.29:0,90,1303	0/0:11,0:11:24.04:0,24,310
chr10	55195399	.	CG	C	8915.52	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=3.456;DP=654;FS=8.332;HRun=4;HaplotypeScore=101.1801;InbreedingCoeff=0.9973;MQ=63.48;MQ0=4;MQRankSum=2.137;QD=31.62;ReadPosRankSum=3.470;VQSLOD=4.7351;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,50:52:99:1688,141,0	0/0:11,0:11:30.10:0,30,420	0/0:16,0:14:29.76:0,30,373	0/0:14,0:10:29.76:0,30,371	1/1:2,30:31:90.19:1060,90,0	0/0:18,0:18:45.14:0,45,597	0/0:27,0:23:63.14:0,63,822	0/0:38,0:37:99:0,111,1456	0/0:20,0:19:54.18:0,54,755	0/0:33,0:33:84.27:0,84,1157	0/0:15,0:15:42.14:0,42,573	1/1:0,24:24:69.21:827,69,0	1/1:2,22:24:57.16:683,57,0	0/0:25,0:24:66.22:0,66,915	0/0:27,0:26:75.23:0,75,1027	1/1:1,15:15:42.13:504,42,0	1/1:1,31:32:87.27:1043,87,0	1/1:1,18:19:51.16:611,51,0	0/0:15,0:15:45.15:0,45,628	0/0:19,0:19:54.18:0,54,746	0/0:27,0:27:66.22:0,66,923	1/1:2,21:23:57.13:667,57,0	1/1:0,27:27:75.23:900,75,0	1/1:6,27:33:78.24:933,78,0	0/0:12,0:12:33.11:0,33,461	0/0:32,1:31:54.29:0,54,1181	0/0:15,0:14:39.13:0,39,537	0/0:7,0:7:15.05:0,15,210
chr10	55195474	.	GAAA	G	3650.49	PASS	AB=0.657;AC=26;AF=0.481;AN=54;BaseQRankSum=-6.296;DP=541;FS=6.867;HRun=14;HaplotypeScore=116.8158;InbreedingCoeff=0.6069;MQ=49.15;MQ0=19;MQRankSum=0.762;QD=12.50;ReadPosRankSum=1.583;VQSLOD=1.8836;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:36:51.37:0,51,494	0/0:16,0:17:40.36:0,40,676	0/0:10,0:1:3.01:0,3,30	./.	0/0:19,0:32:57.06:0,57,466	1/1:6,8:14:30:331,30,0	1/1:8,8:17:29.62:299,30,0	0/0:16,0:25:54.57:0,55,680	0/1:6,6:12:2.98:189,0,3	1/1:8,17:25:44.96:516,45,0	1/1:7,8:16:23.55:239,24,0	0/1:7,0:19:3.36:3,0,37	0/1:7,3:14:23.05:55,0,23	0/0:18,0:18:36.07:0,36,552	1/1:4,14:16:30.07:347,30,0	0/0:6,0:9:11.83:0,12,119	0/0:8,0:33:74.96:0,75,631	0/0:5,0:15:37.92:0,38,324	1/1:2,6:8:21.04:240,21,0	1/1:10,13:25:50.70:532,51,0	0/1:6,1:8:0:0,0,0	0/0:9,0:25:22.16:0,22,51	0/1:13,1:27:7.92:8,0,52	0/1:9,1:30:16.99:17,0,85	1/1:2,19:20:33.01:385,33,0	1/1:11,6:17:14.88:175,15,0	1/1:5,11:14:27.05:315,27,0	0/0:4,5:8:0:0,0,0
chr10	55195539	.	AAAAC	A	11900.07	PASS	AB=0.929;AC=49;AF=0.875;AN=56;BaseQRankSum=5.019;DP=625;FS=2.251;HRun=0;HaplotypeScore=151.8950;InbreedingCoeff=0.6826;MQ=50.30;MQ0=2;MQRankSum=-2.080;QD=21.25;ReadPosRankSum=3.246;VQSLOD=4.7779;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,20:28:41.93:1066,42,0	0/0:15,0:15:33.10:0,33,675	0/0:28,0:15:15.09:0,15,471	0/0:22,0:13:1.89:0,2,256	1/1:9,24:34:87.25:1324,87,0	1/1:1,0:12:29.97:269,30,0	1/1:10,0:9:2.99:23,3,0	1/1:30,4:34:24.05:352,24,0	1/1:5,0:14:24.88:242,25,0	1/1:12,0:17:17.97:159,18,0	1/1:8,0:21:43.52:369,44,0	1/1:4,13:17:39.13:625,39,0	1/1:5,15:20:48.16:769,48,0	0/1:12,1:12:14.94:15,0,629	1/1:6,0:14:27:245,27,0	1/1:4,0:9:18.02:168,18,0	1/1:15,27:42:86.66:1351,87,0	1/1:6,8:14:24.05:357,24,0	1/1:9,0:17:25.58:225,26,0	1/1:14,0:30:36.51:336,37,0	1/1:5,0:7:5.93:45,6,0	1/1:10,14:24:48.16:759,48,0	1/1:11,22:33:72.25:1151,72,0	1/1:13,17:30:48.16:757,48,0	1/1:11,0:19:25.90:216,26,0	1/1:12,1:25:46.29:419,46,0	1/1:7,0:26:53.96:489,54,0	1/1:1,0:7:18.02:168,18,0
chr10	55195614	.	TA	T	4213.99	PASS	AB=0.886;AC=32;AF=0.571;AN=56;BaseQRankSum=4.330;DP=570;FS=1.607;HRun=11;HaplotypeScore=92.2411;InbreedingCoeff=0.7888;MQ=60.15;MQ0=0;MQRankSum=0.745;QD=12.73;ReadPosRankSum=1.047;VQSLOD=4.9572;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:41:83.83:0,84,940	0/1:7,1:8:6.60:7,0,142	0/0:16,0:13:26.64:0,27,254	0/0:9,0:7:11.95:0,12,98	0/1:26,4:30:35.48:35,0,445	1/1:4,16:19:49.91:394,50,0	1/1:6,11:16:3.95:236,4,0	1/1:5,0:35:59.48:174,59,0	1/1:7,11:15:32.93:271,33,0	1/1:4,11:16:40.79:314,41,0	1/1:7,14:20:35.19:294,35,0	0/0:25,2:27:47.32:0,47,621	0/0:16,0:16:38.97:0,39,375	0/0:10,1:10:5.41:0,5,243	1/1:3,12:15:29.95:246,30,0	1/1:4,10:14:26.90:213,27,0	0/0:30,0:30:57.12:0,57,598	0/0:13,1:14:5.40:0,5,246	1/1:8,15:22:52.85:409,53,0	1/1:9,13:16:6.95:264,7,0	1/1:1,20:19:12.88:312,13,0	0/0:27,0:27:66.08:0,66,689	0/0:21,0:21:42.10:0,42,441	0/0:25,1:26:32.48:0,32,539	1/1:6,13:17:12.96:313,13,0	1/1:6,13:18:43.93:343,44,0	1/1:12,11:20:29.92:246,30,0	1/1:2,7:9:17.92:143,18,0
chr10	55197243	.	G	GTCTCTCTCTCTCTC	16821.22	PASS	AB=1.000;AC=50;AF=0.926;AN=54;BaseQRankSum=-0.407;DP=637;FS=15.453;HRun=0;HaplotypeScore=273.6546;InbreedingCoeff=0.2059;MQ=66.55;MQ0=2;MQRankSum=-6.781;QD=28.08;ReadPosRankSum=-1.339;VQSLOD=2.2065;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:26,6:33:14.79:880,15,0	1/1:5,0:5:3.01:97,3,0	0/1:35,0:25:17.69:18,0,520	0/1:31,0:23:25.57:26,0,356	1/1:20,2:23:8.26:545,8,0	1/1:26,0:26:18.02:555,18,0	1/1:23,0:23:15.02:421,15,0	1/1:39,0:35:37.35:933,37,0	1/1:24,0:24:14.26:595,14,0	1/1:21,0:21:24.08:1190,24,0	./.	1/1:16,2:19:18.06:908,18,0	1/1:14,3:18:12.04:808,12,0	0/0:19,0:21:57.18:0,57,1875	1/1:28,0:28:12.04:467,12,0	1/1:23,0:26:15.05:845,15,0	1/1:24,8:33:42.14:2278,42,0	1/1:9,3:14:15.05:1012,15,0	1/1:25,0:23:30.07:1106,30,0	1/1:24,0:24:2.99:24,3,0	1/1:12,0:12:2.99:24,3,0	1/1:21,2:23:3.01:202,3,0	1/1:15,1:16:6.02:388,6,0	1/1:14,5:20:12.04:729,12,0	1/1:24,0:24:3.01:166,3,0	1/1:26,0:24:36.80:1731,37,0	1/1:20,0:19:21.07:855,21,0	1/1:10,0:10:2.98:21,3,0
chr10	55198202	.	TCATC	T	5140.06	PASS	AB=0.827;AC=48;AF=0.857;AN=56;BaseQRankSum=5.020;DP=596;FS=36.958;HRun=0;HaplotypeScore=112.1854;InbreedingCoeff=0.3925;MQ=48.30;MQ0=25;MQRankSum=-2.058;QD=11.15;ReadPosRankSum=4.240;VQSLOD=2.6040;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:16,14:27:14.08:207,14,0	1/1:0,2:2:6.02:100,6,0	0/0:54,0:33:2.39:0,2,483	0/0:53,0:32:32.28:0,32,739	1/1:16,2:16:2.83:26,3,0	1/1:12,2:12:11.96:165,12,0	1/1:25,4:21:15.53:225,16,0	0/1:28,5:25:99:127,0,167	1/1:12,4:11:18.05:275,18,0	1/1:15,1:15:3.01:50,3,0	1/1:3,2:5:5.98:70,6,0	1/1:28,6:34:16.75:810,17,0	1/1:16,4:20:22.97:348,23,0	0/0:28,0:26:57.20:0,57,1315	1/1:11,9:17:21.30:441,21,0	1/1:10,8:15:26.48:396,26,0	1/1:11,3:13:11.99:169,12,0	1/1:9,9:16:12.04:201,12,0	1/1:10,10:15:27.04:382,27,0	1/1:8,4:12:9.02:127,9,0	1/1:39,3:29:2.84:26,3,0	1/1:12,2:13:8.98:100,9,0	1/1:7,9:16:6.02:97,6,0	1/1:12,17:28:5.98:67,6,0	1/1:5,6:9:9.03:150,9,0	0/1:8,3:9:31.10:181,0,31	1/1:4,7:10:21.07:350,21,0	1/1:7,1:8:3.01:50,3,0
chr10	55198230	.	TCATCCATCCATC	T	1614.30	PASS	AB=0.974;AC=22;AF=0.407;AN=54;BaseQRankSum=3.225;DP=575;FS=3.060;HRun=0;HaplotypeScore=128.9460;InbreedingCoeff=0.1960;MQ=29.49;MQ0=106;MQRankSum=-4.396;QD=4.82;ReadPosRankSum=0.263;VQSLOD=2.1035;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:20:14.38:0,14,142	1/1:1,1:2:6.02:134,6,0	0/0:28,0:6:2.80:0,3,13	0/1:35,0:7:0:0,0,0	0/1:10,0:7:0:0,0,0	./.	0/1:31,0:17:22.78:48,0,23	0/1:49,19:29:18.92:659,0,19	0/1:15,0:7:26.06:78,0,26	0/0:12,0:7:5.98:0,6,65	1/1:2,0:2:3.01:37,3,0	0/0:38,0:36:50.34:0,50,1020	0/0:23,0:21:8.01:0,8,352	0/0:30,0:26:45.14:0,45,1653	1/1:17,0:14:24.08:358,24,0	0/0:11,0:11:24.06:0,24,382	1/1:11,0:8:3.48:48,3,0	0/0:13,0:9:4.23:0,4,25	1/1:29,0:11:3.01:46,3,0	0/1:7,0:7:0:0,0,0	0/1:50,0:22:27.84:28,0,102	0/1:18,0:16:8.01:8,0,127	0/0:19,0:15:10.61:0,11,136	1/1:23,0:20:0.47:1,0,0	0/0:12,0:8:3.48:0,3,40	0/0:17,0:7:3.01:0,3,56	0/1:11,0:10:82.08:314,0,82	0/1:2,0:2:0:0,0,0
chr10	55198250	.	CCATCCAT	C	540.36	PASS	AB=0.949;AC=9;AF=0.188;AN=48;BaseQRankSum=4.896;DP=675;FS=0.000;HRun=0;HaplotypeScore=104.9678;InbreedingCoeff=0.0877;MQ=21.79;MQ0=195;MQRankSum=-2.391;QD=5.15;ReadPosRankSum=1.866;VQSLOD=1.4933;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:16:11.97:0,12,137	0/1:3,0:3:21.53:22,0,47	./.	./.	./.	0/0:13,0:5:8.94:0,9,64	0/0:34,0:16:6.85:0,7,187	0/0:84,0:23:10.83:0,11,253	0/1:25,1:12:46.44:46,0,86	0/0:23,0:12:11.66:0,12,221	0/0:5,2:4:1.55:0,2,4	0/0:39,0:33:54.64:0,55,1171	0/0:24,0:21:21.54:0,22,359	0/0:30,0:23:48.16:0,48,1630	1/1:12,4:12:2.44:209,2,0	0/0:22,0:13:29.48:0,29,248	0/1:12,0:7:9.21:30,0,9	0/0:12,0:6:5.87:0,6,35	0/1:25,1:5:41.66:42,0,49	1/1:4,0:3:2.88:15,3,0	0/0:64,1:20:0.55:0,1,118	0/0:22,0:17:20.37:0,20,329	0/0:19,0:14:13.58:0,14,166	0/0:20,0:15:3.01:0,3,40	0/0:13,0:8:9:0,9,132	0/0:19,0:7:11.99:0,12,138	0/1:14,4:14:99:301,0,200	./.
chr10	55198265	.	CCCATCCATCTAT	C	1022.21	PASS	AB=0.956;AC=18;AF=0.391;AN=46;BaseQRankSum=1.371;DP=693;FS=18.172;HRun=0;HaplotypeScore=109.0721;InbreedingCoeff=-0.0454;MQ=19.33;MQ0=214;MQRankSum=-1.560;QD=3.57;ReadPosRankSum=-1.194;VQSLOD=0.2588;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:9:2.94:0,3,18	0/0:5,0:4:2.84:0,3,14	0/0:49,0:4:9.50:0,10,215	./.	./.	0/1:17,0:8:15.76:184,0,16	0/1:32,0:12:8.13:49,0,8	0/0:82,0:25:38.10:0,38,581	0/1:27,0:11:5.91:64,0,6	0/0:28,0:12:4.75:0,5,145	./.	0/1:29,3:25:56.77:260,0,57	0/1:9,11:17:36.97:202,0,37	0/1:33,0:25:81.56:82,0,748	0/1:16,0:10:22.25:22,0,25	0/1:23,0:13:47.52:48,0,155	0/1:9,0:5:5.92:13,0,6	./.	0/0:29,0:4:6.87:0,7,47	1/1:6,0:4:5.86:36,6,0	0/0:64,0:21:13.04:0,13,160	1/1:21,0:15:8.83:54,9,0	0/0:16,0:13:5.01:0,5,24	1/1:14,0:9:1.55:4,2,0	1/1:15,0:10:8.71:51,9,0	0/1:21,0:10:37.88:99,0,38	0/0:18,0:12:23.12:0,23,172	./.
chr10	55198275	.	TATCC	T	337.10	PASS	AB=0.983;AC=10;AF=0.238;AN=42;BaseQRankSum=-0.747;DP=692;FS=8.313;HRun=0;HaplotypeScore=87.1106;InbreedingCoeff=-0.0697;MQ=18.57;MQ0=226;MQRankSum=0.652;QD=1.44;ReadPosRankSum=1.606;VQSLOD=1.0276;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:12:11.86:0,12,107	./.	0/0:46,0:4:9.36:0,9,97	./.	0/1:9,0:3:0:0,0,0	0/1:20,0:10:7.68:8,0,49	0/1:29,0:9:8.05:8,0,64	0/1:72,0:18:7.01:7,0,175	0/0:27,0:11:5.18:0,5,25	0/0:26,0:10:5.97:0,6,74	./.	0/0:28,0:20:1.21:0,1,74	0/1:22,0:19:9.39:25,0,9	0/1:32,2:26:48.02:287,0,48	0/0:19,0:12:5.90:0,6,37	0/1:20,2:14:68.62:85,0,69	0/0:12,0:7:6.02:0,6,73	0/0:13,0:6:8.97:0,9,89	./.	0/1:9,0:6:9.01:9,0,10	0/0:68,0:24:9.43:0,9,100	0/0:19,0:13:1.55:0,2,4	./.	./.	1/1:17,0:10:3.45:22,3,0	0/0:26,0:14:11.95:0,12,196	0/0:21,0:12:6.01:0,6,69	./.
chr10	55198477	.	T	TG	88.42	PASS	AB=0.979;AC=11;AF=0.344;AN=32;BaseQRankSum=-0.945;DP=518;FS=5.425;HRun=0;HaplotypeScore=49.9360;InbreedingCoeff=-0.1806;MQ=11.18;MQ0=303;MQRankSum=-0.643;QD=0.42;ReadPosRankSum=-0.214;VQSLOD=0.9037;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:10:2.68:11,3,0	0/0:18,0:2:6.02:0,6,76	./.	./.	./.	1/1:9,0:4:2.50:9,2,0	./.	./.	0/1:22,1:5:19.59:27,0,20	./.	./.	0/1:22,1:9:31.60:32,0,134	0/1:14,0:7:16.31:16,0,33	0/1:23,0:6:5.92:6,0,48	0/1:27,1:13:24.86:25,0,88	0/1:30,1:9:38.28:62,0,38	0/0:32,0:6:3.56:0,4,19	0/1:28,0:10:0.90:1,0,27	./.	./.	0/0:36,0:6:0.89:0,1,2	0/0:15,0:2:2.51:0,3,7	./.	0/0:15,0:5:3.37:0,3,17	0/0:21,0:3:0:0,0,0	./.	0/0:15,0:1:3:0,3,25	./.
chr10	55198501	.	T	TG	170.51	PASS	AB=0.984;AC=12;AF=0.400;AN=30;BaseQRankSum=1.219;DP=616;FS=26.969;HRun=0;HaplotypeScore=51.0573;InbreedingCoeff=-0.1385;MQ=12.46;MQ0=334;MQRankSum=-0.057;QD=0.70;ReadPosRankSum=1.366;VQSLOD=-0.1924;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:36,1:9:3:25,3,0	0/0:20,0:2:5.49:0,5,34	./.	./.	./.	1/1:15,0:6:0.68:3,1,0	./.	./.	0/1:30,0:8:45.83:46,0,83	./.	./.	0/1:28,1:11:84.18:84,0,117	0/1:18,0:7:32.66:33,0,49	0/1:33,0:12:4.93:5,0,109	0/1:37,0:16:8.73:9,0,147	0/0:31,0:11:4.59:0,5,185	0/0:34,1:8:0.68:0,1,4	0/1:27,2:12:60.96:61,0,101	./.	./.	./.	0/0:25,0:5:4.70:0,5,17	./.	0/0:19,0:7:7.27:0,7,84	0/0:26,0:3:0:0,0,0	./.	1/1:15,0:2:1.25:3,1,0	./.
chr10	55198779	.	TC	T	830.49	PASS	AB=0.932;AC=17;AF=0.340;AN=50;BaseQRankSum=-0.251;DP=1292;FS=4.781;HRun=2;HaplotypeScore=188.7991;InbreedingCoeff=-0.3905;MQ=18.24;MQ0=353;MQRankSum=-0.973;QD=0.99;ReadPosRankSum=1.699;VQSLOD=-0.5565;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:58,4:43:79.41:79,0,221	0/0:38,1:8:2.77:0,3,30	./.	./.	0/0:39,2:17:3.32:0,3,29	0/0:36,0:24:41.48:0,41,437	0/0:46,0:30:33.02:0,33,387	./.	0/1:46,5:25:31.79:32,0,500	0/1:71,8:26:74.21:74,0,418	0/1:38,2:13:7.29:53,0,7	0/1:56,4:32:18.22:18,0,617	0/0:48,0:30:10.58:0,11,339	0/1:41,2:26:35.07:35,0,108	0/1:59,10:35:99:174,0,303	0/1:54,4:39:44.52:45,0,611	0/1:48,4:29:99:135,0,202	0/1:37,2:19:38.45:38,0,337	0/1:22,2:5:23.83:24,0,143	0/0:47,0:14:5.27:0,5,15	0/1:89,14:47:84.30:133,0,84	0/1:44,3:26:20.91:21,0,79	0/1:48,1:20:7.06:29,0,7	0/0:47,0:23:0.22:0,0,213	0/0:37,2:16:3.77:0,4,8	0/1:45,2:20:4.66:5,0,356	0/0:34,0:13:21.55:0,22,269	1/1:16,2:4:6.02:77,6,0
chr10	55198920	.	C	CTGT	40.04	PASS	AB=0.993;AC=8;AF=0.182;AN=44;BaseQRankSum=1.427;DP=1943;DS;FS=10.709;HRun=0;HaplotypeScore=71.6766;InbreedingCoeff=-0.0168;MQ=10.49;MQ0=1490;MQRankSum=-0.592;QD=0.05;ReadPosRankSum=-0.131;VQSLOD=0.4340;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:118,2:26:14.19:14,0,176	./.	./.	./.	./.	1/1:73,1:9:3.01:65,3,0	0/0:95,0:8:5.85:0,6,70	0/0:25,1:12:24.55:0,25,394	0/0:104,1:21:12.40:0,12,284	./.	0/0:30,0:3:3.01:0,3,36	0/0:121,0:12:8.58:0,9,159	0/0:86,0:11:8.98:0,9,130	0/1:113,0:21:17.30:17,0,165	0/1:125,0:22:9.71:10,0,131	0/0:100,0:13:19.58:0,20,367	0/0:99,0:17:23.43:0,23,350	0/0:81,2:14:6.02:0,6,99	0/0:29,0:6:16.98:0,17,219	./.	0/1:162,3:24:24.88:25,0,52	0/0:41,0:5:3:0,3,26	0/1:37,0:4:0:0,0,0	0/1:106,0:18:22.10:22,0,77	0/0:55,0:13:5.70:0,6,63	0/0:73,1:11:15.05:0,15,268	0/0:34,0:3:6.02:0,6,112	0/0:27,0:4:3.01:0,3,55
chr10	55199137	.	C	CATGT	15290.24	PASS	AB=0.722;AC=49;AF=0.907;AN=54;BaseQRankSum=-3.848;DP=657;FS=3.280;HRun=0;HaplotypeScore=120.1541;InbreedingCoeff=0.6417;MQ=57.24;MQ0=3;MQRankSum=-0.603;QD=25.11;ReadPosRankSum=0.178;VQSLOD=4.7470;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:30:10.74:121,11,0	1/1:4,0:7:12.01:179,12,0	./.	0/0:15,0:11:11.99:0,12,128	1/1:19,0:30:21.07:359,21,0	1/1:6,13:19:27.09:640,27,0	1/1:11,10:23:18.06:428,18,0	1/1:39,0:38:24.43:282,24,0	1/1:6,14:20:30.10:712,30,0	1/1:19,12:31:3.91:1033,4,0	1/1:7,9:16:24.08:569,24,0	0/1:16,10:26:11.15:671,0,11	1/1:10,16:26:39.13:919,39,0	0/0:15,0:16:39.10:0,39,570	1/1:3,20:24:51.18:1210,51,0	1/1:21,0:29:33.11:556,33,0	1/1:21,1:30:14.92:243,15,0	1/1:18,0:22:15.02:204,15,0	1/1:14,8:22:27.02:496,27,0	1/1:12,12:24:24.08:568,24,0	1/1:4,9:15:24.06:522,24,0	1/1:9,13:21:21.07:498,21,0	1/1:8,14:22:24.08:569,24,0	1/1:8,12:23:24.08:570,24,0	1/1:8,15:24:13.16:761,13,0	1/1:30,15:45:30.99:1615,31,0	1/1:7,25:31:63.22:1489,63,0	1/1:6,1:7:4.83:77,5,0
chr10	55199221	.	TC	T	805	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.104;DP=623;FS=2.724;HRun=4;HaplotypeScore=71.5498;InbreedingCoeff=0.9150;MQ=60.53;MQ0=4;MQRankSum=3.110;QD=29.81;ReadPosRankSum=-0.851;VQSLOD=3.3383;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:81.26:0,81,1116	0/0:4,0:4:9.03:0,9,126	0/0:28,0:22:54.18:0,54,757	0/0:20,0:18:47.52:0,48,615	0/0:18,0:18:39.13:0,39,546	0/0:18,0:17:51.17:0,51,714	0/0:22,0:22:60.14:0,60,798	0/0:31,0:31:87.28:0,87,1189	0/0:23,0:23:63.19:0,63,850	0/0:32,0:32:96.28:0,96,1321	0/0:12,0:12:21.07:0,21,294	0/0:21,0:21:63.20:0,63,863	0/0:15,0:15:42.13:0,42,569	0/0:23,0:23:63.21:0,63,871	0/0:22,0:22:48.16:0,48,672	1/1:0,27:27:75.23:900,75,0	0/0:32,0:32:78.20:0,78,1052	0/0:20,0:20:54.18:0,54,756	0/0:27,0:27:78.22:0,78,1054	0/0:16,0:16:42.14:0,42,588	0/0:35,0:35:99:0,102,1428	0/0:23,0:23:57.19:0,57,798	0/0:20,0:20:51.17:0,51,713	0/0:38,0:38:90.29:0,90,1243	0/0:21,0:21:57.19:0,57,798	0/0:20,0:20:57.19:0,57,798	0/0:22,0:22:57.19:0,57,797	0/0:4,0:4:12.04:0,12,168
chr10	55199616	.	C	CG	8846.48	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-7.159;DP=583;FS=1.085;HRun=5;HaplotypeScore=97.0522;InbreedingCoeff=0.9588;MQ=84.85;MQ0=1;MQRankSum=-2.731;QD=28.45;ReadPosRankSum=-0.374;VQSLOD=4.4658;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:84.21:0,84,900	1/1:2,3:5:6.02:79,6,0	0/0:24,0:24:2.80:0,3,329	0/0:17,0:17:20.96:0,21,282	0/0:14,0:14:33.07:0,33,344	1/1:0,16:16:36.12:474,36,0	1/1:2,29:31:63.20:829,63,0	1/1:5,18:23:51.04:586,51,0	1/1:2,22:24:42.14:553,42,0	1/1:4,24:28:69.06:845,69,0	1/1:0,11:11:24.08:316,24,0	0/0:25,0:25:74.88:0,75,764	0/0:25,0:25:72.10:0,72,752	0/0:21,0:21:57.14:0,57,612	1/1:5,21:26:54.18:708,54,0	0/0:14,0:14:37.86:0,38,378	0/0:21,0:21:60.11:0,60,631	0/0:26,0:26:72.18:0,72,770	1/1:3,19:22:57.16:733,57,0	1/1:1,7:8:21.07:276,21,0	1/1:3,43:46:87.28:1143,87,0	0/0:16,0:16:33.07:0,33,345	0/0:18,0:18:48.11:0,48,508	0/0:18,0:17:51.13:0,51,547	1/1:0,18:18:39.13:513,39,0	1/1:3,25:28:75.13:950,75,0	1/1:4,13:16:45.11:566,45,0	1/1:0,8:8:21.07:276,21,0
chr10	55199752	.	TAA	T	10326.47	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-4.687;DP=608;FS=12.086;HRun=13;HaplotypeScore=90.9132;InbreedingCoeff=0.9355;MQ=71.01;MQ0=3;MQRankSum=-0.286;QD=19.27;ReadPosRankSum=5.378;VQSLOD=2.8443;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,29:34:74.97:774,75,0	1/1:1,0:11:19.04:81,19,0	0/0:20,0:17:17.40:0,17,140	0/0:27,0:27:50.41:0,50,460	1/1:2,15:19:22.13:265,22,0	1/1:7,18:25:56.69:523,57,0	1/1:5,19:25:33.73:446,34,0	1/1:6,23:31:71.45:648,71,0	1/1:3,18:21:48.03:466,48,0	1/1:2,13:14:36.02:348,36,0	1/1:1,16:17:14.98:325,15,0	1/1:4,18:23:50.78:477,51,0	1/1:3,17:20:44.95:436,45,0	0/0:18,0:19:50.62:0,51,639	1/1:2,17:19:33.04:319,33,0	1/1:6,9:16:14.92:195,15,0	1/1:2,22:25:51:544,51,0	1/1:4,16:22:40.35:411,40,0	1/1:8,12:22:37.44:320,37,0	1/1:4,14:18:39.02:375,39,0	1/1:11,18:30:56.12:623,56,0	1/1:3,16:20:44.43:390,44,0	1/1:4,16:20:35.81:349,36,0	1/1:3,30:33:75.11:727,75,0	1/1:1,9:12:23.70:265,24,0	1/1:6,26:32:56.86:553,57,0	1/1:4,14:17:36.01:349,36,0	1/1:2,4:8:4.61:116,5,0
chr10	55200790	.	A	AT	972.18	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=0.864;DP=740;FS=4.882;HRun=4;HaplotypeScore=88.2048;InbreedingCoeff=0.9920;MQ=77.46;MQ0=0;MQRankSum=-1.259;QD=31.36;ReadPosRankSum=2.280;VQSLOD=4.2081;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,120,1319	0/0:16,0:16:45.11:0,45,501	0/0:26,0:26:57.04:0,57,614	0/0:29,0:29:59.64:0,60,666	0/0:21,0:21:60.17:0,60,680	0/0:18,0:18:48.14:0,48,544	0/0:28,0:28:78.21:0,78,875	0/0:32,0:32:81.18:0,81,879	1/1:2,29:31:78.26:1067,78,0	0/0:30,0:30:81.23:0,81,918	0/0:31,0:31:81.23:0,81,919	0/0:30,0:30:84.24:0,84,950	0/0:21,0:21:60.15:0,60,665	0/0:24,0:24:66.19:0,66,749	0/0:37,0:37:99:0,111,1248	0/0:22,0:22:63.18:0,63,715	0/0:21,0:21:59.53:0,60,654	0/0:16,0:16:48.14:0,48,545	0/0:17,0:17:51.15:0,51,579	0/0:29,0:29:78.21:0,78,875	0/0:19,0:19:48.11:0,48,524	0/0:34,0:34:96.27:0,96,1088	0/0:38,0:38:99:0,111,1256	0/0:32,0:32:93.26:0,93,1055	0/0:21,0:21:54.14:0,54,603	0/0:37,0:37:99:0,105,1167	0/0:29,0:29:87.23:0,87,975	0/0:7,0:7:18.03:0,18,192
chr10	55203982	.	GAACA	G	6455.44	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-4.995;DP=668;FS=4.938;HRun=0;HaplotypeScore=133.8934;InbreedingCoeff=0.9809;MQ=73.68;MQ0=0;MQRankSum=-0.147;QD=24.18;ReadPosRankSum=3.127;VQSLOD=4.7226;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:54:99:0,100,1722	0/0:7,0:7:15.05:0,15,337	0/0:31,0:26:15.05:0,15,345	0/0:23,0:23:24.55:0,25,527	0/0:14,0:35:69.24:0,69,1208	0/0:30,0:30:57.20:0,57,1300	1/1:8,6:15:18.05:267,18,0	0/0:31,0:31:39.13:0,39,897	1/1:10,12:22:24.08:383,24,0	1/1:6,17:23:45.15:719,45,0	1/1:13,7:21:24.07:363,24,0	0/0:9,0:22:33.11:0,33,575	0/0:6,0:13:9.03:0,9,158	0/0:17,0:17:45.12:0,45,982	1/1:5,16:22:36.12:555,36,0	0/0:18,0:27:48.16:0,48,899	0/0:10,0:30:54.19:0,54,957	0/0:11,0:22:30.10:0,30,518	1/1:12,7:19:21.04:304,21,0	1/1:6,10:16:21.07:335,21,0	1/1:11,23:34:57.19:910,57,0	0/0:12,0:23:33.11:0,33,595	0/0:9,0:14:18.05:0,18,285	0/0:8,0:22:36.12:0,36,630	1/1:9,12:21:33.11:527,33,0	1/1:14,15:29:45.15:714,45,0	1/1:11,24:35:72.24:1138,72,0	1/1:2,8:10:15.05:239,15,0
chr10	55204082	.	GCTTAA	G	723.66	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.380;DP=626;FS=0.000;HRun=0;HaplotypeScore=120.5206;InbreedingCoeff=0.9993;MQ=80.95;MQ0=0;MQRankSum=-0.595;QD=51.69;ReadPosRankSum=0.547;VQSLOD=3.5290;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,132,3949	0/0:11,0:11:33.11:0,33,980	0/0:16,0:16:36.06:0,36,904	0/0:20,0:20:48.01:0,48,1129	0/0:20,0:20:54.19:0,54,1664	0/0:17,0:17:48.14:0,48,1417	0/0:23,0:23:66.22:0,66,1975	0/0:25,0:25:72.25:0,72,2216	0/0:14,0:14:39.13:0,39,1209	0/0:31,0:31:90.30:0,90,2611	0/0:13,0:13:39.11:0,39,1074	0/0:29,0:29:81.28:0,81,2444	0/0:18,0:18:51.16:0,51,1490	0/0:17,0:17:48.16:0,48,1433	0/0:25,0:25:72.24:0,72,2100	1/1:0,14:14:39.13:818,39,0	0/0:32,0:32:84.28:0,84,2493	0/0:22,0:22:66.23:0,66,1981	0/0:23,0:23:59.58:0,60,1776	0/0:27,0:27:81.21:0,81,2395	0/0:26,0:26:78.21:0,78,2194	0/0:15,0:15:39.13:0,39,1204	0/0:25,0:25:72.23:0,72,2062	0/0:24,0:24:69.15:0,69,1990	0/0:22,0:22:66.21:0,66,1971	0/0:29,0:29:87.27:0,87,2544	0/0:21,0:21:63.19:0,63,1813	0/0:19,0:19:48.16:0,48,1488
chr10	55204849	.	A	ACCT	936.98	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-4.099;DP=786;FS=5.389;HRun=0;HaplotypeScore=111.6255;InbreedingCoeff=0.9989;MQ=82.98;MQ0=0;MQRankSum=-3.730;QD=66.93;ReadPosRankSum=-0.453;VQSLOD=4.7030;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,144,2652	1/1:1,13:14:42.14:1032,42,0	0/0:25,0:25:65.99:0,66,1012	0/0:22,0:22:57.16:0,57,944	0/0:21,0:21:63.22:0,63,1173	0/0:19,0:19:54.19:0,54,1007	0/0:40,0:40:99:0,117,2142	0/0:31,0:31:87.29:0,87,1593	0/0:33,0:33:96.29:0,96,1711	0/0:29,0:29:87.27:0,87,1534	0/0:11,0:11:27.05:0,27,411	0/0:54,0:54:99:0,163,2962	0/0:27,0:27:78.27:0,78,1438	0/0:29,0:29:87.28:0,87,1582	0/0:38,0:38:99:0,114,2019	0/0:30,0:30:90.26:0,90,1604	0/0:48,0:48:99:0,138,2486	0/0:19,0:19:51.16:0,51,907	0/0:24,0:24:72.25:0,72,1330	0/0:14,0:14:39.12:0,39,696	0/0:46,0:46:99:0,135,2455	0/0:22,0:22:66.23:0,66,1223	0/0:17,0:17:48.15:0,48,864	0/0:29,0:29:87.28:0,87,1591	0/0:17,0:17:51.17:0,51,948	0/0:36,0:36:99:0,105,1929	0/0:27,0:27:78.27:0,78,1453	0/0:16,0:16:48.16:0,48,873
chr10	55205811	.	CAGCGAGCGAGCGAGCGTCTACAACTGATAGCAGGCCTCACAGCT	C	1608.36	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.783;DP=579;FS=1.588;HRun=0;HaplotypeScore=587.8385;InbreedingCoeff=0.9374;MQ=82.78;MQ0=0;MQRankSum=-3.780;QD=100.52;ReadPosRankSum=1.879;VQSLOD=-0.1078;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,102,14407	0/0:0,0:4:12.04:0,12,1284	0/0:14,0:14:41.93:0,42,2007	0/0:20,0:20:47.07:0,47,2204	0/0:14,0:14:42.13:0,42,4889	0/0:18,0:18:48.15:0,48,6661	0/0:32,0:32:90.31:0,90,9011	0/0:12,0:12:36.11:0,36,3083	0/0:18,0:18:51.17:0,51,8192	0/0:17,0:17:51.18:0,51,5922	0/0:8,0:8:18.06:0,18,1696	0/0:26,0:26:78.27:0,78,11314	0/0:23,0:23:66.21:0,66,9401	0/0:27,0:27:78.27:0,78,11502	0/0:16,0:16:45.15:0,45,7102	1/1:8,8:16:15.05:1697,15,0	0/0:29,0:29:81.28:0,81,12691	0/0:26,0:26:75.26:0,75,11095	0/0:24,0:24:72.25:0,72,8291	0/0:9,0:9:27.09:0,27,2323	0/0:71,0:71:99:0,211,27306	0/0:6,0:6:18.06:0,18,1835	0/0:14,0:14:30.18:0,30,2311	0/0:32,0:32:93.32:0,93,15721	0/0:11,0:11:30.10:0,30,4630	0/0:27,0:27:78.27:0,78,10642	0/0:17,0:17:51.17:0,51,6351	0/0:13,0:13:39.13:0,39,5794
chr10	55207475	.	A	AGGT	17550.76	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-18.237;DP=796;FS=10.194;HRun=0;HaplotypeScore=107.1772;InbreedingCoeff=0.9998;MQ=81.13;MQ0=0;MQRankSum=-3.610;QD=49.02;ReadPosRankSum=2.760;VQSLOD=7.1048;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,123,1955	0/0:16,0:16:45.14:0,45,711	0/0:19,0:19:45.12:0,45,633	0/0:25,0:25:66.13:0,66,955	0/0:31,0:31:90.18:0,90,1377	1/1:3,15:21:36.12:770,36,0	1/1:1,15:16:42.14:937,42,0	0/0:36,0:36:99:0,102,1518	1/1:2,22:26:63.21:1374,63,0	1/1:7,28:37:93.27:1931,93,0	1/1:5,18:23:42.14:870,42,0	0/0:35,0:35:96.23:0,96,1477	0/0:35,0:35:99:0,105,1679	0/0:23,0:23:69.22:0,69,1102	1/1:2,42:44:99:2364,111,0	0/0:33,0:33:96.30:0,96,1515	0/0:28,0:28:81.25:0,81,1293	0/0:13,0:13:36.10:0,36,561	1/1:3,10:14:36.02:603,36,0	1/1:4,19:27:51.03:1104,51,0	1/1:3,39:43:87.27:1942,87,0	0/0:36,0:36:99:0,99,1553	0/0:31,0:31:81.26:0,81,1293	0/0:31,0:31:87.30:0,87,1406	1/1:2,27:30:66.23:1473,66,0	1/1:2,31:35:99:2012,99,0	1/1:2,27:30:72.25:1601,72,0	1/1:0,10:12:27.09:569,27,0
chr10	55209133	.	C	CAATATCA	28356.48	PASS	AC=48;AF=0.889;AN=54;BaseQRankSum=-6.185;DP=613;FS=9.819;HRun=0;HaplotypeScore=117.3813;InbreedingCoeff=0.8632;MQ=59.04;MQ0=0;MQRankSum=-7.575;QD=51.00;ReadPosRankSum=1.923;VQSLOD=4.4610;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:15,5:22:21.03:623,21,0	1/1:3,3:7:6.02:224,6,0	0/0:21,0:21:30.10:0,30,611	0/0:14,0:14:12.58:0,13,324	1/1:4,26:34:66.14:2188,66,0	1/1:6,14:21:24.08:894,24,0	1/1:7,4:10:6.02:224,6,0	1/1:24,9:38:42.14:966,42,0	1/1:11,16:28:33.11:1229,33,0	1/1:11,17:33:60.21:2002,60,0	1/1:11,15:28:51.13:1678,51,0	1/1:6,15:22:36.12:1341,36,0	1/1:4,9:13:21.07:782,21,0	0/0:14,0:14:33.11:0,33,771	1/1:7,19:27:39.13:1447,39,0	1/1:7,11:19:24.08:894,24,0	1/1:8,12:23:26.30:901,26,0	1/1:8,1:10:6.02:224,6,0	1/1:7,8:14:27.09:866,27,0	1/1:13,25:41:69.19:2479,69,0	./.	1/1:7,13:21:36.08:1194,36,0	1/1:8,20:31:43.86:1569,44,0	1/1:5,4:9:9.03:335,9,0	1/1:6,20:30:45.15:1677,45,0	1/1:8,11:19:33.08:1049,33,0	1/1:10,28:41:75.26:2788,75,0	1/1:1,11:12:21.07:783,21,0
chr10	55209507	.	TACA	T	162.56	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.182;DP=752;FS=0.000;HRun=0;HaplotypeScore=102.7273;InbreedingCoeff=0.9800;MQ=84.45;MQ0=0;MQRankSum=0.898;QD=23.22;ReadPosRankSum=-0.405;VQSLOD=3.0024;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:69.24:0,69,1586	1/1:0,7:7:15.05:251,15,0	0/0:27,0:27:78:0,78,1616	0/0:20,0:20:51.15:0,51,1079	0/0:36,0:36:99:0,102,2218	0/0:28,0:28:81.26:0,81,1805	0/0:22,0:22:66.21:0,66,1455	0/0:26,0:26:72.23:0,72,1586	0/0:36,0:36:99:0,108,2487	0/0:39,0:39:99:0,117,2696	0/0:26,0:26:78.27:0,78,1774	0/0:30,0:30:90.31:0,90,2033	0/0:32,0:32:93.32:0,93,2096	0/0:18,0:18:54.17:0,54,1200	0/0:34,0:34:99:0,102,2332	0/0:25,0:25:75.24:0,75,1643	0/0:33,0:33:92.97:0,93,2051	0/0:28,0:28:84.29:0,84,1936	0/0:9,0:9:21.07:0,21,465	0/0:34,0:34:96.33:0,96,2210	0/0:21,0:21:63.21:0,63,1408	0/0:31,0:31:90.31:0,90,2053	0/0:33,0:33:93.31:0,93,2067	0/0:19,0:19:54.19:0,54,1245	0/0:30,0:30:87.30:0,87,2005	0/0:33,0:33:99:0,99,2267	0/0:30,0:30:87.28:0,87,1960	0/0:22,0:22:66.23:0,66,1521
chr10	55210071	.	CTG	C	473.08	PASS	AB=0.807;AC=3;AF=0.054;AN=56;BaseQRankSum=4.974;DP=767;FS=4.427;HRun=0;HaplotypeScore=96.3226;InbreedingCoeff=0.6305;MQ=55.35;MQ0=18;MQRankSum=-6.082;QD=8.30;ReadPosRankSum=-4.106;VQSLOD=1.8863;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,102,1747	1/1:1,10:11:14.71:187,15,0	0/0:35,0:7:21.07:0,21,334	0/0:61,0:17:32.84:0,33,413	0/0:16,0:16:45.13:0,45,777	0/0:25,0:24:72.17:0,72,1202	0/0:30,0:30:78.27:0,78,1376	0/1:35,11:43:99:387,0,1145	0/0:21,0:21:57.15:0,57,974	0/0:21,0:21:63.22:0,63,1135	0/0:20,0:20:60.17:0,60,979	0/0:26,0:26:75.24:0,75,1331	0/0:26,0:26:78.24:0,78,1352	0/0:24,0:24:69.21:0,69,1198	0/0:35,0:35:99:0,102,1612	0/0:25,0:24:63.18:0,63,1077	0/0:22,0:22:58.66:0,59,1041	0/0:21,0:21:57.13:0,57,974	0/0:21,0:17:48.13:0,48,756	0/0:18,0:18:50.87:0,51,855	0/0:41,0:41:99:0,104,1662	0/0:23,1:24:66.20:0,66,1145	0/0:24,0:24:65.28:0,65,903	0/0:37,0:37:99:0,99,1694	0/0:17,0:17:48.15:0,48,813	0/0:34,0:33:96.30:0,96,1635	0/0:29,0:29:78.23:0,78,1332	0/0:19,0:19:48.16:0,48,877
chr10	55210098	.	CCT	C	587.88	PASS	AB=0.918;AC=12;AF=0.214;AN=56;BaseQRankSum=4.222;DP=732;FS=9.916;HRun=0;HaplotypeScore=103.7029;InbreedingCoeff=0.1224;MQ=54.56;MQ0=10;MQRankSum=0.842;QD=2.66;ReadPosRankSum=1.140;VQSLOD=1.2461;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:28,4:32:2.67:3,0,914	1/1:11,0:11:3.12:24,3,0	0/0:24,0:5:12:0,12,164	0/0:49,0:18:21.04:0,21,310	0/1:18,0:18:27.13:27,0,496	0/1:16,3:19:40.92:41,0,531	0/1:23,6:28:99:120,0,654	0/0:39,0:38:49.12:0,49,845	0/1:16,1:17:2.84:3,0,430	0/0:23,0:23:56.40:0,56,834	0/0:27,0:27:60.12:0,60,897	0/0:29,0:29:36.11:0,36,1054	0/1:26,2:28:5.90:6,0,819	0/0:23,0:23:54.12:0,54,789	0/0:27,0:27:75.26:0,75,1196	1/1:6,18:24:41.96:482,42,0	0/0:25,0:24:21.48:0,21,777	0/0:19,0:19:36.12:0,36,573	0/0:18,0:19:29.56:0,30,380	0/0:24,0:24:31.32:0,31,808	0/0:24,0:25:66.18:0,66,975	0/0:23,1:23:9.15:0,9,581	0/0:26,1:27:72.24:0,72,1116	0/0:34,2:36:3.29:0,3,989	0/1:19,2:21:14.74:15,0,753	0/0:35,3:37:51.29:0,51,1243	0/0:28,3:31:42.29:0,42,1142	0/1:20,0:20:14.73:15,0,224
chr10	55211885	.	G	GC	479.28	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-4.953;DP=567;FS=0.000;HRun=4;HaplotypeScore=73.4415;InbreedingCoeff=0.9323;MQ=89.78;MQ0=0;MQRankSum=-2.652;QD=26.63;ReadPosRankSum=-0.928;VQSLOD=2.1690;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,102,1145	0/0:10,0:10:24.07:0,24,272	0/0:22,0:22:53.58:0,54,538	0/0:22,0:22:41.27:0,41,459	0/0:15,0:15:45.11:0,45,499	0/0:17,0:17:51.11:0,51,559	0/0:34,0:34:96.23:0,96,1059	0/0:20,0:20:45.06:0,45,510	0/0:23,0:23:60.15:0,60,670	0/0:17,0:17:45.11:0,45,498	0/0:9,0:9:26.44:0,26,280	0/0:21,0:21:54.15:0,54,612	0/0:22,0:22:66.16:0,66,729	0/0:16,0:16:39.08:0,39,421	0/0:18,0:18:48.14:0,48,544	1/1:1,17:18:42.14:574,42,0	0/0:48,0:47:99:0,132,1454	0/0:28,0:28:78.18:0,78,867	0/0:10,0:10:27.07:0,27,299	0/0:6,0:6:17.97:0,18,176	0/0:34,0:34:99:0,99,1113	0/0:11,0:11:27.06:0,27,297	0/0:12,0:12:27.08:0,27,305	0/0:29,0:28:87.21:0,87,973	0/0:21,0:21:51.14:0,51,578	0/0:25,0:25:66.18:0,66,747	0/0:20,0:20:60.15:0,60,669	0/0:3,0:3:9.03:0,9,102
chr10	55212719	.	TTTTTG	T	7344.25	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=9.640;DP=555;FS=0.398;HRun=0;HaplotypeScore=124.9963;InbreedingCoeff=0.9751;MQ=62.51;MQ0=4;MQRankSum=-10.881;QD=34.48;ReadPosRankSum=4.504;VQSLOD=4.4568;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:87.75:0,88,2321	0/0:13,0:13:27.09:0,27,767	0/0:31,0:19:29.99:0,30,537	0/0:28,0:17:14.99:0,15,323	0/0:27,0:27:54.19:0,54,1504	1/1:2,8:10:24.08:445,24,0	1/1:7,9:16:30.06:520,30,0	0/0:25,0:25:36.12:0,36,887	1/1:10,10:20:33.11:606,33,0	1/1:10,15:25:48.16:889,48,0	1/1:8,16:24:51.17:945,51,0	0/0:15,0:15:36.12:0,36,998	0/0:20,0:20:45.15:0,45,1235	0/0:15,0:15:30.10:0,30,808	1/1:4,10:14:36.12:654,36,0	0/0:20,0:20:45.15:0,45,1229	0/0:26,0:26:60.19:0,60,1567	0/0:22,0:22:54.11:0,54,1363	1/1:12,6:16:18.01:270,18,0	1/1:6,13:19:45.15:825,45,0	1/1:11,5:16:15.05:278,15,0	0/0:19,0:19:54.17:0,54,1426	0/0:17,0:17:36.12:0,36,1000	0/0:23,0:23:42.14:0,42,1121	1/1:3,4:7:12.04:222,12,0	1/1:6,15:21:45.15:834,45,0	1/1:8,12:20:42.12:745,42,0	1/1:1,2:3:6.02:111,6,0
chr10	55212755	.	CTTT	C	3208.11	PASS	AB=0.558;AC=30;AF=0.536;AN=56;BaseQRankSum=12.086;DP=617;FS=5.532;HRun=14;HaplotypeScore=125.9645;InbreedingCoeff=0.8146;MQ=56.15;MQ0=12;MQRankSum=-9.912;QD=11.46;ReadPosRankSum=2.739;VQSLOD=1.5352;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:48:99:0,122,1834	0/1:0,1:9:8.56:22,0,9	0/0:45,0:17:25.01:0,25,251	0/0:44,0:15:16.58:0,17,130	0/0:29,0:32:70.37:0,70,1044	1/1:3,11:13:23.99:280,24,0	1/1:5,17:19:17.90:193,18,0	1/1:3,0:25:7.83:141,8,0	1/1:10,9:20:25.46:306,25,0	1/1:12,8:18:17.90:199,18,0	1/1:10,16:26:41.62:436,42,0	0/0:12,0:15:42.08:0,42,664	0/0:17,0:21:51.08:0,51,723	0/0:14,0:15:33.04:0,33,489	1/1:5,11:17:17.87:192,18,0	0/1:6,0:15:10.24:21,0,10	0/0:21,0:27:51.15:0,51,912	0/0:22,0:22:52.57:0,53,862	1/1:6,3:8:3.67:66,4,0	1/1:6,16:22:35.88:403,36,0	1/1:7,6:11:5.85:70,6,0	0/0:23,0:25:57.12:0,57,942	0/0:12,0:12:21.01:0,21,324	0/0:21,0:24:67.88:0,68,1133	1/1:1,9:10:15.01:176,15,0	1/1:8,10:19:19.45:243,19,0	1/1:6,19:26:43.45:503,43,0	1/1:0,8:8:15.04:175,15,0
chr10	55213386	.	A	AAT	12450.64	PASS	AB=0.957;AC=29;AF=0.518;AN=56;BaseQRankSum=4.537;DP=630;FS=26.932;HRun=0;HaplotypeScore=113.7445;InbreedingCoeff=0.9586;MQ=66.71;MQ0=4;MQRankSum=-9.134;QD=46.98;ReadPosRankSum=-1.459;VQSLOD=3.2890;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,132,1991	0/0:10,0:10:30.10:0,30,469	0/0:26,0:22:60.04:0,60,824	0/0:28,0:24:53.58:0,54,733	0/0:36,0:36:99:0,105,1563	1/1:1,9:10:30.09:545,30,0	1/1:2,11:13:36.12:694,36,0	1/1:9,17:24:66.15:1229,66,0	1/1:0,15:14:42.14:810,42,0	1/1:5,23:27:81.28:1544,81,0	1/1:2,12:14:36.12:687,36,0	0/0:38,0:38:99:0,114,1723	0/0:19,0:19:54.17:0,54,803	0/0:32,0:32:84.26:0,84,1262	1/1:3,18:21:54.17:1000,54,0	0/1:21,1:22:0.80:1,0,726	0/0:29,0:29:75.25:0,75,1148	0/0:22,0:22:63.21:0,63,963	1/1:4,15:18:51.17:983,51,0	1/1:5,21:25:66.23:1273,66,0	1/1:0,16:16:39.13:752,39,0	0/0:28,0:28:53.26:0,53,1112	0/0:22,0:22:60.20:0,60,917	0/0:30,0:30:87.30:0,87,1332	1/1:2,10:13:39.12:714,39,0	1/1:4,17:21:57.20:1080,57,0	1/1:2,13:15:45.15:850,45,0	1/1:1,5:5:15.05:289,15,0
chr10	55213396	.	TTG	T	249.20	PASS	AB=0.957;AC=17;AF=0.304;AN=56;BaseQRankSum=2.887;DP=796;FS=13.563;HRun=0;HaplotypeScore=214.3379;InbreedingCoeff=0.0384;MQ=55.15;MQ0=9;MQRankSum=0.746;QD=0.58;ReadPosRankSum=0.824;VQSLOD=1.6021;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:54,1:55:6.54:7,0,579	1/1:10,0:12:8.65:48,9,0	0/0:22,0:18:3.01:0,3,37	0/0:26,0:20:3.01:0,3,37	0/1:33,2:35:64:64,0,309	0/1:24,0:24:5.97:7,0,6	0/1:23,0:23:1.53:2,0,17	0/0:31,0:29:25.71:0,26,168	0/0:29,0:28:6.49:0,6,41	0/0:44,0:42:43.24:0,43,230	0/1:24,0:24:0:0,0,0	0/1:41,2:43:7.79:8,0,972	0/0:20,0:20:36.06:0,36,463	0/1:33,5:38:18.41:18,0,544	0/0:35,0:35:5.39:0,5,41	1/1:14,0:21:22.63:118,23,0	0/1:28,1:31:23.14:23,0,411	0/0:23,0:22:22.63:0,23,313	0/0:23,0:20:11.80:0,12,54	1/1:36,0:35:0.19:1,0,0	0/0:27,0:26:7.81:0,8,32	0/1:27,1:28:6.55:7,0,229	0/1:17,2:19:51.48:51,0,116	0/1:35,2:37:43.08:43,0,512	0/0:22,0:22:1.45:0,1,29	0/0:28,0:28:25.67:0,26,245	0/0:27,0:27:22.50:0,22,136	0/0:12,0:10:13.75:0,14,78
chr10	55213433	.	TGGTATG	T	1270.65	PASS	AB=0.933;AC=12;AF=0.214;AN=56;BaseQRankSum=8.768;DP=1014;FS=45.654;HRun=0;HaplotypeScore=317.5677;InbreedingCoeff=-0.1493;MQ=40.69;MQ0=61;MQRankSum=-9.143;QD=3.37;ReadPosRankSum=-2.298;VQSLOD=0.9571;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,1:44:49.30:0,49,3229	0/0:17,0:17:19.09:0,19,301	0/0:85,0:10:24.07:0,24,634	0/0:88,0:8:17.51:0,18,432	0/0:24,0:24:47.50:0,47,1409	0/0:28,0:29:31.11:0,31,279	0/1:34,3:34:74.04:127,0,74	0/0:68,2:63:47.38:0,47,681	0/1:26,4:30:35:402,0,35	0/1:53,0:45:14.83:15,0,371	0/0:25,0:25:2.84:0,3,17	0/0:37,0:37:99:0,102,3074	0/0:27,0:27:69.05:0,69,2089	0/0:37,0:35:84.28:0,84,2652	0/1:29,2:32:55.38:154,0,55	0/1:31,1:32:13.20:13,0,764	0/0:25,0:27:21.20:0,21,1932	0/0:18,0:17:45.15:0,45,1495	0/1:45,0:35:23.29:23,0,305	0/0:37,1:37:1.88:0,2,19	0/1:27,1:24:15.01:120,0,15	0/0:21,0:21:57.16:0,57,1709	0/0:11,0:11:30.10:0,30,913	0/0:35,1:36:80.33:0,80,2997	0/1:29,1:30:24.69:102,0,25	0/1:38,2:37:99:228,0,129	0/1:30,1:31:99:156,0,142	1/1:10,0:9:1.58:77,2,0
chr10	55213435	.	GTAT	G	2070.53	PASS	AB=0.983;AC=17;AF=0.304;AN=56;BaseQRankSum=13.983;DP=994;FS=41.327;HRun=0;HaplotypeScore=278.3622;InbreedingCoeff=0.0460;MQ=40.76;MQ0=60;MQRankSum=-12.072;QD=3.94;ReadPosRankSum=1.035;VQSLOD=1.4733;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:94.18:0,94,2298	0/1:15,1:16:60.15:60,0,230	0/0:86,0:10:29.87:0,30,527	0/0:92,0:9:15.63:0,16,357	0/0:21,0:21:47.95:0,48,1041	0/1:28,0:28:39.17:39,0,160	0/1:37,0:32:59.86:139,0,60	0/1:70,1:64:99:146,0,386	1/1:29,1:29:9.73:249,10,0	0/1:54,0:46:99:558,0,122	0/0:24,0:24:2.42:0,2,14	0/0:35,0:35:99:0,99,2237	0/0:26,0:26:63.16:0,63,1462	0/0:34,1:33:86.99:0,87,1928	0/1:28,2:30:34.37:63,0,34	0/1:32,0:32:43.58:44,0,548	0/0:25,0:25:62.23:0,62,1456	0/0:16,0:15:45.15:0,45,1073	0/1:47,0:37:99:175,0,207	0/1:41,0:39:0.01:1,0,0	0/1:32,1:25:3.29:73,0,3	0/0:22,0:22:57.19:0,57,1296	0/0:10,0:10:30.02:0,30,642	0/0:35,0:35:58.34:0,58,2186	0/1:30,0:29:0.46:89,0,0	0/1:35,0:32:4.47:312,0,4	0/1:30,0:31:26.30:176,0,26	1/1:9,0:9:16.55:109,17,0
chr10	55213436	.	TATG	T	771.05	PASS	AB=0.986;AC=12;AF=0.214;AN=56;BaseQRankSum=13.800;DP=999;FS=35.489;HRun=0;HaplotypeScore=283.8729;InbreedingCoeff=-0.0689;MQ=40.74;MQ0=62;MQRankSum=-11.596;QD=2.20;ReadPosRankSum=2.908;VQSLOD=1.5258;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:82.97:0,83,2332	0/1:16,0:16:21.82:22,0,309	0/0:89,0:10:29.87:0,30,535	0/0:94,0:9:9.81:0,10,382	0/0:20,0:20:48.06:0,48,1034	0/0:28,0:28:22.86:0,23,326	0/1:37,0:32:65.51:66,0,94	0/0:70,0:63:81.30:0,81,872	0/1:29,0:28:26.82:218,0,27	0/1:52,0:44:81.73:82,0,350	0/0:24,0:24:2.80:0,3,16	0/0:36,0:36:99:0,103,2242	0/0:25,0:25:66.21:0,66,1499	0/0:36,0:34:90.28:0,90,2036	0/1:31,0:30:56.25:58,0,56	0/0:32,0:32:6.49:0,6,706	0/0:26,0:26:46.70:0,47,1468	0/0:17,0:16:45.15:0,45,1067	0/1:46,0:36:4.22:4,0,370	0/0:42,0:40:5.01:0,5,33	0/1:29,4:25:7.58:88,0,8	0/0:22,0:22:60.20:0,60,1350	0/0:10,0:10:30.10:0,30,677	0/0:36,0:36:45.65:0,46,2169	0/1:30,0:29:26.38:63,0,26	0/1:35,1:33:99:140,0,193	0/1:31,0:31:99:120,0,185	1/1:9,0:9:11.45:63,11,0
chr10	55213437	.	ATGGTG	A	8305.14	PASS	AB=0.719;AC=25;AF=0.446;AN=56;BaseQRankSum=12.585;DP=1018;FS=42.397;HRun=0;HaplotypeScore=287.5010;InbreedingCoeff=0.5861;MQ=40.73;MQ0=61;MQRankSum=-13.218;QD=14.73;ReadPosRankSum=-4.479;VQSLOD=2.1358;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:96.94:0,97,2505	0/1:9,8:17:91.17:220,0,91	0/0:88,0:10:27.97:0,28,549	0/0:95,0:10:26.53:0,27,452	0/0:20,0:20:39.13:0,39,1001	1/1:18,10:28:29.54:302,30,0	1/1:18,19:32:23.09:390,23,0	1/1:46,28:66:99:1521,114,0	1/1:16,14:29:51.02:560,51,0	1/1:31,24:47:75.87:1846,76,0	0/1:14,11:25:0.01:0,0,1	0/0:36,0:36:81.26:0,81,2087	0/0:24,0:25:63.19:0,63,1565	0/0:36,0:34:84.29:0,84,2132	1/1:23,10:32:12.38:129,12,0	0/1:26,6:32:99:220,0,485	0/0:26,0:26:49.01:0,49,1425	0/0:17,0:16:42.14:0,42,1131	0/1:27,19:36:4.71:888,0,5	0/1:28,18:44:1.73:57,0,2	1/1:30,4:26:4.62:77,5,0	0/0:22,0:22:54.16:0,54,1330	0/0:10,0:10:30.10:0,30,744	0/0:37,0:37:84.27:0,84,2099	1/1:13,17:29:24.43:272,24,0	1/1:22,14:33:63.76:1124,64,0	0/1:18,14:32:5.92:464,0,6	0/1:5,4:9:11.64:235,0,12
chr10	55213471	.	A	ATGTG	3518.84	PASS	AB=0.989;AC=15;AF=0.268;AN=56;BaseQRankSum=7.852;DP=1155;FS=31.100;HRun=0;HaplotypeScore=366.6532;InbreedingCoeff=-0.1934;MQ=43.05;MQ0=48;MQRankSum=-8.834;QD=5.93;ReadPosRankSum=-2.051;VQSLOD=0.8181;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:44:99:0,120,2069	0/0:28,0:28:37.86:0,38,381	0/0:68,0:15:14.13:0,14,319	0/0:94,0:15:29.04:0,29,425	0/0:23,0:23:53.81:0,54,917	0/1:26,1:26:99:362,0,137	0/1:35,0:32:61.70:180,0,62	0/0:98,0:74:42.54:0,43,1868	0/1:41,1:40:99:532,0,154	0/1:67,0:61:99:177,0,1144	1/1:32,0:31:11.04:125,11,0	0/0:27,0:27:68.53:0,69,1112	0/0:22,0:22:63.21:0,63,1203	0/0:36,0:36:99:0,102,1755	0/1:43,2:43:99:302,0,138	0/1:35,0:35:99:138,0,189	0/0:25,0:26:54.66:0,55,983	0/0:15,0:15:35.61:0,36,661	0/1:42,0:35:99:119,0,671	0/1:57,0:56:81.62:185,0,82	0/1:61,0:51:99:184,0,169	0/0:17,0:17:50.90:0,51,925	0/0:16,0:16:48.16:0,48,956	0/0:45,0:45:99:0,110,1996	0/1:51,0:49:17.96:538,0,18	0/1:57,0:52:99:353,0,827	0/1:29,0:29:99:259,0,186	0/1:10,0:10:65.62:66,0,101
chr10	55213473	.	A	ATGTG	10234.18	PASS	AB=0.926;AC=31;AF=0.554;AN=56;BaseQRankSum=6.925;DP=1182;FS=12.712;HRun=0;HaplotypeScore=354.8393;InbreedingCoeff=0.7422;MQ=43.45;MQ0=52;MQRankSum=-9.907;QD=12.59;ReadPosRankSum=-3.547;VQSLOD=2.7079;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:42:84.22:0,84,1329	1/1:12,1:30:50.64:318,51,0	0/1:69,0:12:5.26:5,0,83	0/0:96,0:17:12.04:0,12,181	0/0:23,0:23:48.13:0,48,751	1/1:12,10:24:13.53:756,14,0	1/1:31,7:34:6.23:451,6,0	0/1:83,0:76:37.88:38,0,255	1/1:33,9:42:69.35:1190,69,0	1/1:56,8:62:44.27:1096,44,0	1/1:29,4:32:11.07:301,11,0	0/0:26,0:26:47.74:0,48,751	0/0:22,0:22:57.16:0,57,894	0/0:34,0:34:78.25:0,78,1268	1/1:35,8:44:17.79:630,18,0	1/1:13,0:39:6.02:303,6,0	0/0:27,0:28:47.82:0,48,726	0/0:15,0:15:27.23:0,27,505	0/1:36,7:35:36.92:477,0,37	1/1:43,8:56:29.47:533,29,0	1/1:49,15:57:21.51:684,22,0	0/0:17,0:17:43.18:0,43,749	0/0:17,0:17:51.16:0,51,821	0/0:47,0:47:99:0,101,1596	1/1:36,15:50:63.04:1442,63,0	1/1:44,10:53:25.17:1138,25,0	1/1:23,6:30:24.90:616,25,0	1/1:8,2:10:5.48:254,5,0
chr10	55213488	.	TGTG	T	2998.12	PASS	AB=0.856;AC=12;AF=0.214;AN=56;BaseQRankSum=9.900;DP=1221;FS=6.006;HRun=0;HaplotypeScore=350.9971;InbreedingCoeff=-0.2684;MQ=42.02;MQ0=59;MQRankSum=-9.965;QD=5.41;ReadPosRankSum=-5.087;VQSLOD=0.6112;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:40:99:0,102,2030	0/0:33,1:34:61.23:0,61,1042	0/1:73,0:7:4.25:4,0,134	0/0:100,0:15:24.84:0,25,392	0/0:21,0:21:57.19:0,57,1199	0/1:28,1:28:46.99:47,0,424	0/1:28,3:29:56.32:56,0,415	0/0:105,0:82:65.76:0,66,1395	0/1:36,8:41:99:418,0,324	0/1:55,14:63:99:871,0,577	0/0:28,8:35:9.20:0,9,144	0/0:30,0:30:72.71:0,73,1408	0/0:23,0:22:66.19:0,66,1297	0/0:34,0:34:96.31:0,96,1930	0/1:36,9:43:99:325,0,209	0/0:39,0:38:40.46:0,40,508	0/0:21,0:21:22.03:0,22,995	0/0:17,0:17:21.68:0,22,848	0/1:37,1:29:51.99:52,0,419	0/1:49,18:67:43.99:44,0,489	0/0:69,1:61:40.61:0,41,596	0/0:19,0:19:57.19:0,57,1192	0/0:22,0:22:51.59:0,52,1277	0/0:52,0:52:99:0,123,2536	0/1:36,16:50:99:187,0,482	0/1:55,9:58:99:487,0,945	0/1:23,8:31:99:363,0,228	0/1:6,5:11:99:293,0,113
chr10	55213503	.	GTGTT	G	1636.37	PASS	AB=0.842;AC=10;AF=0.179;AN=56;BaseQRankSum=8.386;DP=1185;FS=20.248;HRun=0;HaplotypeScore=348.5992;InbreedingCoeff=-0.2186;MQ=44.71;MQ0=50;MQRankSum=-9.590;QD=3.63;ReadPosRankSum=-1.374;VQSLOD=0.8754;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:42:99:0,105,2477	0/0:31,0:32:84.56:0,85,1937	0/1:75,0:10:10.09:10,0,238	0/0:104,0:26:37.74:0,38,813	0/0:24,0:24:72.24:0,72,1820	0/0:27,3:31:11.40:0,11,1032	0/0:32,1:32:83.04:0,83,1432	0/0:91,0:76:99:0,164,3898	0/1:37,4:40:83.34:83,0,978	0/1:43,15:53:99:769,0,1267	0/0:20,10:29:11.89:0,12,517	0/0:28,0:28:74.06:0,74,1762	0/0:22,0:21:60.20:0,60,1412	0/0:36,0:36:99:0,105,2459	0/1:32,6:37:99:121,0,793	0/0:37,0:35:34.06:0,34,982	0/0:25,0:25:20.06:0,20,1377	0/0:17,0:17:46.40:0,46,1140	0/1:32,1:26:24.94:25,0,1121	0/1:41,22:64:35.76:36,0,1059	0/0:77,0:71:88.68:0,89,1491	0/0:24,0:24:72.12:0,72,1623	0/0:22,0:22:63.22:0,63,1628	0/0:55,0:55:99:0,144,3290	0/1:33,13:44:99:118,0,1086	0/1:43,7:46:99:296,0,1743	0/1:26,3:29:92.15:92,0,450	0/1:5,4:9:99:230,0,191
chr10	55213554	.	GTGTATA	G	4717.38	PASS	AB=0.980;AC=26;AF=0.464;AN=56;BaseQRankSum=17.218;DP=1012;FS=7.068;HRun=0;HaplotypeScore=297.5812;InbreedingCoeff=0.5326;MQ=45.30;MQ0=24;MQRankSum=-5.936;QD=8.48;ReadPosRankSum=1.989;VQSLOD=2.6622;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,114,2992	0/1:25,0:25:99:285,0,673	0/0:67,0:13:27.54:0,28,487	0/0:61,0:21:46.63:0,47,988	0/0:30,0:29:59.08:0,59,2288	1/1:24,1:25:53.14:333,53,0	0/1:24,0:24:38.91:39,0,66	0/1:53,0:41:99:200,0,192	0/1:28,1:28:31.31:184,0,31	1/1:44,1:45:50.73:1103,51,0	1/1:37,0:37:32.66:211,33,0	0/0:38,0:38:99:0,114,3509	0/0:17,0:17:44.90:0,45,1273	0/0:30,0:29:78.17:0,78,2162	1/1:32,1:31:1.40:186,1,0	0/1:36,0:34:99:294,0,1372	0/0:30,0:31:77.81:0,78,2341	0/0:26,0:26:20.34:0,20,2211	0/1:26,1:19:57.05:168,0,57	1/1:41,3:43:25.02:383,25,0	1/1:73,4:72:27.92:199,28,0	0/0:28,0:27:78.27:0,78,2518	0/0:28,0:28:81.28:0,81,2391	0/0:54,0:55:99:0,132,3993	1/1:28,0:28:15.68:141,16,0	1/1:33,0:31:57.50:489,57,0	1/1:28,0:28:50.48:305,50,0	1/1:7,0:6:14.94:197,15,0
chr10	55213556	.	GTATA	G	9893.36	PASS	AB=0.908;AC=29;AF=0.518;AN=56;BaseQRankSum=15.923;DP=998;FS=10.633;HRun=0;HaplotypeScore=249.6653;InbreedingCoeff=0.7789;MQ=45.40;MQ0=23;MQRankSum=-6.762;QD=18.05;ReadPosRankSum=1.518;VQSLOD=3.2636;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:44:99:0,117,2548	0/1:24,0:24:99:268,0,557	0/0:63,1:14:27.93:0,28,461	0/0:59,1:20:46.63:0,47,874	0/0:29,0:28:51.01:0,51,1859	1/1:10,14:24:54.15:868,54,0	1/1:19,5:24:14.73:220,15,0	1/1:52,2:40:11.47:285,11,0	1/1:14,17:30:36.46:643,36,0	1/1:28,18:46:99:1672,112,0	1/1:15,21:36:33.37:513,33,0	0/0:39,0:39:99:0,117,2917	0/0:18,0:18:48.13:0,48,1123	0/0:29,0:28:78.13:0,78,1799	1/1:11,22:31:51.14:807,51,0	0/1:33,0:33:99:212,0,1120	0/0:31,1:32:75.35:0,75,1919	0/0:25,1:26:32.96:0,33,1804	0/1:20,8:19:13.43:455,0,13	1/1:19,24:42:58.63:942,59,0	1/1:28,49:71:28:573,28,0	0/0:28,0:27:78.27:0,78,2062	0/0:28,0:28:84.29:0,84,2063	0/0:52,0:52:99:0,131,3270	1/1:14,12:26:26.49:406,26,0	1/1:19,13:30:61.89:932,62,0	1/1:4,24:28:54.18:857,54,0	1/1:2,4:5:15.05:240,15,0
chr10	55213560	.	ATG	A	2006.08	PASS	AB=0.987;AC=26;AF=0.464;AN=56;BaseQRankSum=15.224;DP=979;FS=9.963;HRun=0;HaplotypeScore=244.4704;InbreedingCoeff=0.5714;MQ=46.08;MQ0=24;MQRankSum=-6.446;QD=3.75;ReadPosRankSum=0.750;VQSLOD=1.2959;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:42:77.29:0,77,1184	0/1:20,1:21:28.63:29,0,274	0/0:60,1:10:9.03:0,9,125	0/0:60,0:23:31.17:0,31,400	0/0:29,2:30:0.21:0,0,919	1/1:23,0:23:37.53:196,38,0	0/1:25,0:25:25.01:25,0,25	1/1:41,12:36:35.18:439,35,0	1/1:30,0:29:33.82:157,34,0	0/1:45,0:44:5.21:143,0,5	1/1:33,0:33:17.28:124,17,0	0/0:39,1:40:59.91:0,60,1440	0/0:15,0:15:38.83:0,39,562	0/0:27,0:26:20.51:0,21,790	1/1:34,0:32:41.67:197,42,0	0/1:31,1:30:3.94:4,0,614	0/0:30,1:31:47.95:0,48,982	0/0:26,0:26:61.61:0,62,999	0/1:29,0:22:7.26:89,0,7	1/1:45,0:43:40.87:198,41,0	1/1:78,0:73:20.12:134,20,0	0/0:27,0:26:69.22:0,69,1093	0/0:32,0:32:78.17:0,78,1136	0/0:50,1:51:99:0,109,1689	1/1:22,0:22:19.46:93,19,0	0/1:30,0:28:9.42:130,0,9	1/1:28,0:28:38.31:218,38,0	1/1:6,0:5:8.44:36,8,0
chr10	55213636	.	CT	C	10551.96	PASS	AB=0.950;AC=47;AF=0.839;AN=56;BaseQRankSum=4.313;DP=632;FS=0.000;HRun=10;HaplotypeScore=91.8243;InbreedingCoeff=0.8226;MQ=72.70;MQ0=0;MQRankSum=-2.617;QD=19.36;ReadPosRankSum=5.375;VQSLOD=5.0023;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,21:25:53.92:462,54,0	1/1:1,10:11:29.99:260,30,0	0/1:17,1:16:12.14:12,0,159	0/0:16,1:17:15.24:0,15,143	1/1:5,29:35:83.01:709,83,0	1/1:2,18:20:50.99:443,51,0	1/1:6,14:20:44.98:390,45,0	0/0:25,1:26:37.07:0,37,608	1/1:3,19:22:56.99:495,57,0	1/1:6,27:33:80.93:696,81,0	1/1:7,13:20:35.97:312,36,0	1/1:3,23:27:68.01:579,68,0	1/1:3,21:24:29.72:487,30,0	0/0:20,0:22:44.94:0,45,470	1/1:2,12:14:38.99:338,39,0	0/0:21,1:22:27.31:0,27,504	1/1:4,19:24:56.01:475,56,0	1/1:5,18:23:47.97:417,48,0	1/1:4,6:10:20.97:182,21,0	1/1:6,27:33:74.01:631,74,0	1/1:3,9:13:23.03:188,23,0	1/1:1,28:29:77.98:677,78,0	1/1:3,32:35:62.76:768,63,0	1/1:3,21:24:47.96:417,48,0	1/1:2,30:33:80:683,80,0	1/1:2,22:23:65.99:573,66,0	1/1:10,11:20:2.79:253,3,0	1/1:1,4:4:12:104,12,0
chr10	55214017	.	CT	C	137.27	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.274;DP=698;FS=9.798;HRun=1;HaplotypeScore=75.8925;InbreedingCoeff=0.9916;MQ=83.00;MQ0=0;MQRankSum=-2.767;QD=19.61;ReadPosRankSum=-1.833;VQSLOD=2.4416;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,141,2226	0/0:12,0:12:36.12:0,36,556	0/0:19,0:19:57.16:0,57,835	0/0:35,0:34:80.41:0,80,1230	0/0:19,0:19:57.18:0,57,881	0/0:21,0:21:60.20:0,60,956	0/0:40,0:40:99:0,120,1905	0/0:34,0:34:99:0,99,1535	0/0:25,0:25:63.20:0,63,979	0/0:18,0:18:54.18:0,54,854	0/0:15,0:15:42.14:0,42,671	0/0:31,0:31:93.32:0,93,1479	0/0:31,0:31:93.30:0,93,1441	0/0:20,0:20:60.18:0,60,929	0/0:22,0:22:66.21:0,66,1031	1/1:0,7:6:18.05:228,18,0	0/0:26,0:26:78.24:0,78,1217	0/0:19,0:19:57.15:0,57,854	0/0:28,0:28:84.25:0,84,1251	0/0:30,0:30:87.30:0,87,1387	0/0:42,0:42:99:0,126,1959	0/0:26,0:26:78.27:0,78,1247	0/0:24,0:24:72.25:0,72,1151	0/0:34,0:34:96.33:0,96,1534	0/0:19,0:19:57.19:0,57,903	0/0:22,0:22:66.21:0,66,1014	0/0:19,0:19:57.18:0,57,887	0/0:12,0:12:36.12:0,36,575
chr10	55214124	.	CT	C	518.32	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.933;DP=671;FS=4.905;HRun=3;HaplotypeScore=81.5624;InbreedingCoeff=0.9935;MQ=55.66;MQ0=17;MQRankSum=-6.220;QD=22.54;ReadPosRankSum=1.166;VQSLOD=3.0807;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:43:99:0,117,1658	0/0:7,0:7:21.07:0,21,302	0/0:16,0:10:27.04:0,27,347	0/0:22,0:12:36.12:0,36,507	0/0:19,0:18:54.17:0,54,760	0/0:22,0:22:57.17:0,57,801	0/0:35,0:35:96.24:0,96,1324	0/0:31,0:30:90.21:0,90,1229	0/0:21,0:21:45.11:0,45,620	0/0:21,0:18:48.13:0,48,668	0/0:13,0:13:33.02:0,33,428	0/0:29,0:29:84.24:0,84,1171	0/0:27,0:27:81.27:0,81,1163	0/0:26,0:26:78.26:0,78,1122	0/0:21,0:21:39.12:0,39,530	1/1:0,23:21:51.12:613,51,0	0/0:28,0:28:81.22:0,81,1107	0/0:24,0:24:72.22:0,72,1011	0/0:28,0:27:81.25:0,81,1144	0/0:17,0:17:51.07:0,51,664	0/0:34,0:34:87.23:0,87,1209	0/0:17,0:17:45.08:0,45,622	0/0:32,0:32:87.24:0,87,1210	0/0:22,0:22:63.17:0,63,885	0/0:14,0:13:30.06:0,30,409	0/0:38,0:36:99:0,102,1430	0/0:26,0:26:69.23:0,69,993	0/0:13,0:13:30.10:0,30,432
chr10	55214439	.	A	AC	3988.29	PASS	AB=1.000;AC=55;AF=0.982;AN=56;BaseQRankSum=-3.372;DP=262;FS=0.000;HRun=1;HaplotypeScore=76.2049;InbreedingCoeff=-0.0337;MQ=81.95;MQ0=0;MQRankSum=-1.732;QD=15.22;ReadPosRankSum=2.508;VQSLOD=3.4186;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:15:40.31:221,40,0	1/1:4,0:4:11.63:70,12,0	1/1:13,0:13:35.55:290,36,0	0/1:9,0:10:32.38:82,0,32	1/1:8,0:7:17.45:105,17,0	1/1:12,0:12:34.35:182,34,0	1/1:16,1:17:44.66:244,45,0	1/1:23,0:22:57.36:404,57,0	1/1:3,0:3:8.52:42,9,0	1/1:7,1:8:22.17:146,22,0	1/1:5,0:5:11.32:59,11,0	1/1:10,0:10:28.94:164,29,0	1/1:11,0:11:31.60:177,32,0	1/1:8,0:8:22.79:114,23,0	1/1:6,1:7:17.35:118,17,0	1/1:6,0:6:17.59:112,18,0	1/1:6,0:6:14.48:83,14,0	1/1:4,0:4:8.65:46,9,0	1/1:4,0:4:11.80:79,12,0	1/1:12,0:12:34.53:190,35,0	1/1:9,0:9:23.05:146,23,0	1/1:4,0:4:8.48:41,8,0	1/1:14,0:14:37.72:227,38,0	1/1:14,0:14:31.59:176,32,0	1/1:4,0:3:8.80:57,9,0	1/1:16,1:16:35.95:206,36,0	1/1:6,0:6:14.18:80,14,0	1/1:7,0:7:20.51:127,21,0
chr10	55214867	.	C	CTT	8274.43	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-11.784;DP=349;FS=3.978;HRun=2;HaplotypeScore=42.5015;InbreedingCoeff=0.9496;MQ=80.31;MQ0=0;MQRankSum=-3.420;QD=48.67;ReadPosRankSum=0.301;VQSLOD=4.5149;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:84.26:0,84,1215	0/0:2,0:2:6.02:0,6,88	0/0:14,0:14:38.15:0,38,504	0/0:12,0:12:6.06:0,6,331	0/0:17,0:17:51.17:0,51,750	1/1:2,11:13:36.08:638,36,0	1/1:1,17:18:51.17:955,51,0	1/1:0,18:17:45.14:808,45,0	1/1:1,11:12:24.08:450,24,0	1/1:1,13:15:45.15:802,45,0	1/1:0,14:14:39.13:697,39,0	0/0:13,0:13:36.12:0,36,529	0/0:3,0:3:6.02:0,6,88	0/0:9,0:9:27.06:0,27,357	1/1:1,10:11:27.09:505,27,0	0/0:8,0:8:18.05:0,18,246	0/0:15,0:15:45.15:0,45,663	0/0:18,0:18:49.25:0,49,728	1/1:0,16:16:45.14:796,45,0	1/1:0,4:4:12.04:225,12,0	1/1:0,9:9:27.09:505,27,0	0/0:10,0:10:30.10:0,30,441	0/0:11,0:11:30.10:0,30,442	0/0:18,0:18:48.15:0,48,686	1/1:1,8:11:21.07:393,21,0	1/1:0,8:8:24.08:450,24,0	1/1:1,13:13:36.12:658,36,0	1/1:0,7:7:21.07:393,21,0
chr10	55215051	.	CTT	C	226.48	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=-3.064;DP=472;FS=4.975;HRun=14;HaplotypeScore=131.5721;InbreedingCoeff=0.6354;MQ=65.45;MQ0=2;MQRankSum=-0.253;QD=6.86;ReadPosRankSum=0.378;VQSLOD=1.3916;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:28:60.08:0,60,724	1/1:0,1:1:3:28,3,0	0/1:17,0:10:6.63:7,0,123	0/0:20,0:14:8.22:0,8,56	0/0:13,0:15:36.05:0,36,441	0/0:17,0:17:42.09:0,42,294	0/0:16,0:16:31.55:0,32,215	0/0:24,0:24:31.09:0,31,362	0/0:19,0:19:44.63:0,45,317	0/0:20,0:20:54.59:0,55,365	0/0:9,0:9:17.82:0,18,124	0/0:20,0:20:51:0,51,464	0/0:11,0:11:20.29:0,20,164	0/0:17,0:17:41.03:0,41,435	0/0:22,0:21:31.03:0,31,297	1/1:2,13:15:33.03:305,33,0	0/0:28,0:26:57.14:0,57,749	0/0:15,0:14:30.07:0,30,392	0/0:19,0:18:10.08:0,10,170	0/0:19,0:19:53.37:0,53,363	0/0:19,0:19:35.69:0,36,248	0/0:3,0:3:5.37:0,5,32	0/0:10,0:10:26.91:0,27,220	0/0:19,0:18:50.95:0,51,436	0/0:7,0:7:20.82:0,21,147	0/0:18,0:16:38.67:0,39,277	0/0:37,0:37:75.02:0,75,576	0/0:6,0:6:17.84:0,18,126
chr10	55215057	.	T	TG	6154.28	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=13.604;DP=474;FS=2.169;HRun=0;HaplotypeScore=99.6637;InbreedingCoeff=0.9669;MQ=58.83;MQ0=7;MQRankSum=-3.425;QD=26.41;ReadPosRankSum=3.822;VQSLOD=5.6254;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:65.31:0,65,746	0/0:1,0:1:2.98:0,3,22	0/0:18,0:9:22.45:0,22,221	0/0:18,0:8:15.77:0,16,153	0/0:16,0:16:36.45:0,36,438	1/1:0,19:19:45.12:495,45,0	1/1:1,15:16:32.99:361,33,0	0/0:22,0:22:46.29:0,46,326	1/1:2,18:18:45.08:482,45,0	1/1:1,21:22:66.06:687,66,0	1/1:0,8:8:20.95:214,21,0	0/0:17,0:17:51.14:0,51,689	0/0:10,0:10:24.54:0,25,319	0/0:17,0:17:47.13:0,47,462	1/1:1,20:20:35.72:482,36,0	0/0:14,0:13:32.81:0,33,240	0/0:29,0:27:66.55:0,67,810	0/0:17,0:16:33.05:0,33,404	1/1:2,17:18:50.85:495,51,0	1/1:0,19:19:54.09:581,54,0	1/1:0,18:18:41.96:432,42,0	0/0:4,0:4:11.98:0,12,115	0/0:10,0:10:29.97:0,30,371	0/0:19,0:18:53.91:0,54,685	1/1:1,7:7:21.06:231,21,0	1/1:1,18:16:48.02:490,48,0	1/1:0,38:38:93.05:1006,93,0	1/1:0,6:6:18.05:199,18,0
chr10	55215062	.	T	TTTTTG	605.55	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=-3.413;DP=477;FS=7.244;HRun=0;HaplotypeScore=152.6357;InbreedingCoeff=0.2771;MQ=55.74;MQ0=9;MQRankSum=-3.639;QD=11.43;ReadPosRankSum=-7.826;VQSLOD=-0.6097;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:33:62.67:0,63,901	0/0:2,0:1:3.01:0,3,38	0/0:18,0:9:13.42:0,13,113	0/1:15,0:5:3.18:3,0,42	0/0:19,0:19:46.32:0,46,527	0/0:19,0:19:15.24:0,15,403	0/0:16,0:16:32.38:0,32,321	1/1:5,12:23:37.41:695,37,0	0/0:22,0:20:47.43:0,47,481	0/0:21,0:21:49.65:0,50,522	0/0:6,0:6:18.05:0,18,202	0/0:18,0:18:10.22:0,10,381	0/0:11,0:11:1.06:0,1,143	0/0:16,0:16:10.53:0,11,269	0/0:20,0:19:15.04:0,15,375	0/0:15,0:14:34.64:0,35,400	0/0:28,0:26:53.03:0,53,809	0/0:16,0:15:33.02:0,33,473	0/0:18,0:17:3.41:0,3,244	0/0:20,0:19:43.87:0,44,552	0/0:16,0:16:35.74:0,36,378	0/1:4,0:4:11.01:11,0,18	0/1:11,0:11:4.96:5,0,160	0/0:18,0:18:32.04:0,32,345	0/0:8,0:7:21.05:0,21,229	0/0:19,0:16:47.37:0,47,440	0/0:36,0:36:34.49:0,34,770	0/0:7,0:7:17.98:0,18,201
chr10	55218175	.	A	ATC	10322.96	PASS	AB=0.519;AC=29;AF=0.518;AN=56;BaseQRankSum=-13.707;DP=712;FS=2.504;HRun=0;HaplotypeScore=99.8972;InbreedingCoeff=0.9505;MQ=75.06;MQ0=14;MQRankSum=-1.321;QD=29.24;ReadPosRankSum=-0.027;VQSLOD=6.3484;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:72.23:0,72,915	1/1:2,9:11:15.05:251,15,0	0/0:51,0:21:34.87:0,35,396	0/0:90,0:48:50.61:0,51,676	0/0:25,0:25:63.20:0,63,798	1/1:2,16:18:21.07:351,21,0	1/1:8,11:19:33.10:523,33,0	1/1:13,37:48:99:1832,114,0	1/1:3,17:20:33.11:552,33,0	1/1:11,11:22:51.15:787,51,0	0/1:1,13:14:2.07:516,0,2	0/0:20,0:20:57.18:0,57,725	0/0:19,0:19:45.14:0,45,572	0/0:13,0:13:27.09:0,27,342	1/1:5,22:26:39.13:653,39,0	0/0:22,0:22:39.06:0,39,481	0/0:21,0:21:48.62:0,49,610	0/0:21,0:21:57.13:0,57,706	1/1:8,12:18:36.10:517,36,0	1/1:2,21:23:42.14:703,42,0	1/1:6,37:43:57.19:954,57,0	0/0:13,0:13:33.09:0,33,406	0/0:11,0:11:30.10:0,30,382	0/0:21,0:21:54.16:0,54,673	1/1:4,18:21:33.11:552,33,0	1/1:15,15:28:69.22:1079,69,0	1/1:4,21:24:48.16:803,48,0	1/1:2,6:8:15.05:251,15,0
chr10	55218267	.	G	GTC	1728.41	PASS	AB=0.861;AC=14;AF=0.304;AN=46;BaseQRankSum=4.791;DP=592;FS=1.304;HRun=0;HaplotypeScore=101.9522;InbreedingCoeff=0.2193;MQ=44.10;MQ0=29;MQRankSum=-5.271;QD=8.56;ReadPosRankSum=-2.646;VQSLOD=3.0728;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:44:83.66:0,84,1044	0/1:5,4:8:19.80:41,0,20	./.	./.	0/0:31,0:30:66.18:0,66,835	1/1:15,2:13:1.77:4,2,0	0/1:17,2:14:0:0,0,0	0/0:35,0:16:36.11:0,36,462	1/1:12,1:10:12.04:176,12,0	0/1:24,6:22:83.10:368,0,83	./.	0/0:24,0:23:57.14:0,57,713	0/0:26,0:26:66.09:0,66,857	0/0:26,0:26:60.19:0,60,777	./.	0/0:19,0:18:15.03:0,15,181	0/0:25,0:24:40.63:0,41,537	0/0:23,0:20:52.05:0,52,659	0/1:16,4:11:99:225,0,128	0/1:11,4:11:20.15:39,0,20	./.	0/0:21,0:20:42.14:0,42,546	0/0:15,0:15:36.09:0,36,439	0/0:45,0:44:95.29:0,95,1243	1/1:13,3:13:6.02:95,6,0	0/1:40,0:38:99:706,0,213	0/1:12,1:10:0.62:142,0,1	0/1:9,1:9:57.43:76,0,57
chr10	55218271	.	CTCTCTGTCTCTCTGTCTCTCTCTCTG	C	5038.27	PASS	AC=20;AF=0.435;AN=46;BaseQRankSum=6.892;DP=587;FS=5.597;HRun=0;HaplotypeScore=276.2687;InbreedingCoeff=0.8735;MQ=43.45;MQ0=27;MQRankSum=-8.340;QD=25.84;ReadPosRankSum=-3.023;VQSLOD=2.8919;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:43:84.74:0,85,2901	1/1:8,0:7:5.54:124,6,0	./.	./.	0/0:29,0:28:66.16:0,66,2200	0/0:17,0:13:2.49:0,2,6	0/0:17,0:12:0.03:0,0,0	1/1:37,0:19:17.99:235,18,0	1/1:12,0:9:12.04:175,12,0	1/1:29,0:21:45.12:917,45,0	./.	0/0:25,0:24:60.06:0,60,1931	0/0:26,0:26:69.24:0,69,2421	0/0:24,0:24:60.20:0,60,2036	./.	0/0:22,0:18:18.05:0,18,287	0/0:25,0:25:57.89:0,58,1592	0/0:24,0:21:47.26:0,47,1938	1/1:21,0:10:15.62:495,16,0	1/1:12,0:8:6.02:123,6,0	./.	0/0:21,0:20:42.14:0,42,1609	0/0:16,0:16:42.13:0,42,1415	0/0:48,0:47:99:0,104,3942	1/1:15,0:12:6.02:95,6,0	1/1:4,35:36:91.41:2148,91,0	1/1:12,0:9:14.98:278,15,0	1/1:10,0:9:15.05:447,15,0
chr10	55218275	.	CTG	C	257.05	PASS	AB=0.985;AC=9;AF=0.196;AN=46;BaseQRankSum=6.338;DP=595;FS=3.634;HRun=0;HaplotypeScore=107.9574;InbreedingCoeff=0.2930;MQ=43.19;MQ0=30;MQRankSum=-3.010;QD=2.02;ReadPosRankSum=-5.295;VQSLOD=0.4715;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:44:90.10:0,90,1590	0/1:8,0:7:7.68:17,0,8	./.	./.	0/0:28,0:28:72.04:0,72,1237	0/0:18,0:13:4.70:0,5,25	0/1:14,0:10:0:0,0,0	0/0:39,0:23:36.07:0,36,625	1/1:10,1:8:9.21:55,9,0	0/1:29,0:21:89.73:90,0,147	./.	0/0:27,0:26:66.10:0,66,1130	0/0:28,0:28:81.16:0,81,1389	0/0:24,0:24:59.97:0,60,1007	./.	0/0:20,0:16:17.67:0,18,227	0/0:25,0:25:61.08:0,61,947	0/0:24,0:21:57.15:0,57,1025	0/0:21,0:10:2.19:0,2,154	0/0:12,0:8:2.72:0,3,13	./.	0/0:21,0:20:45.14:0,45,834	0/0:16,0:16:42.13:0,42,755	0/0:48,0:47:93.55:0,94,1852	1/1:14,0:12:5.64:45,6,0	0/1:39,0:35:99:106,0,346	0/1:11,1:9:14.73:71,0,15	0/0:9,1:9:11.34:0,11,88
chr10	55218285	.	GTC	G	224.17	PASS	AB=0.919;AC=14;AF=0.318;AN=44;BaseQRankSum=8.528;DP=592;FS=18.455;HRun=0;HaplotypeScore=107.0002;InbreedingCoeff=0.4606;MQ=41.68;MQ0=30;MQRankSum=-5.896;QD=1.61;ReadPosRankSum=2.021;VQSLOD=1.0044;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:49,1:42:81.06:0,81,1274	1/1:6,1:6:2.37:8,2,0	./.	./.	0/0:23,0:23:57.19:0,57,965	1/1:14,1:11:0.48:1,0,0	0/0:20,0:13:3.49:0,3,33	0/0:44,0:29:68.94:0,69,778	./.	0/1:19,3:16:63.37:63,0,131	./.	0/0:28,0:27:66.20:0,66,1049	0/0:28,0:28:61.44:0,61,1059	0/0:22,0:22:54.17:0,54,878	./.	1/1:11,8:15:8.94:95,9,0	0/0:20,0:20:48.15:0,48,756	0/0:24,0:21:51.15:0,51,803	0/0:21,0:10:1.43:0,1,61	1/1:12,1:9:1.30:6,1,0	0/0:23,0:13:0:0,0,0	0/0:19,0:18:42.14:0,42,706	0/0:14,0:14:33.11:0,33,556	0/0:49,0:48:99:0,109,1770	./.	0/1:44,2:40:34.95:158,0,35	1/1:8,2:7:1.24:3,1,0	1/1:6,1:6:4.26:12,4,0
chr10	55218431	.	TTC	T	697.57	PASS	AB=0.869;AC=19;AF=0.452;AN=42;BaseQRankSum=-0.772;DP=689;FS=14.151;HRun=0;HaplotypeScore=128.4541;InbreedingCoeff=0.0058;MQ=49.98;MQ0=37;MQRankSum=0.163;QD=1.88;ReadPosRankSum=2.932;VQSLOD=1.8172;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:51:22.71:0,23,242	0/1:3,0:9:0.13:0,0,0	./.	./.	0/0:14,0:20:12:0,12,104	1/1:11,0:13:1.19:3,1,0	1/1:34,0:28:2.20:7,2,0	./.	0/1:15,0:13:0:0,0,0	0/1:23,0:23:14.22:14,0,29	./.	0/0:33,0:33:18.37:0,18,352	0/1:25,0:23:14.92:15,0,381	0/1:31,0:31:51.03:51,0,253	0/1:18,0:17:0:0,0,0	0/1:16,0:17:8.04:8,0,13	0/1:18,13:32:24.44:145,0,24	0/1:12,10:21:36.06:93,0,36	1/1:10,0:10:5.68:28,6,0	./.	0/0:31,0:26:0.31:0,0,1	0/0:14,0:16:5.93:0,6,40	0/0:14,0:17:6:0,6,52	1/1:33,28:68:43.92:437,44,0	./.	0/1:27,0:27:11.64:12,0,62	0/1:13,0:14:8.11:8,0,26	./.
chr10	55218762	.	GCCTGC	G	757.17	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=1.737;DP=635;FS=8.012;HRun=0;HaplotypeScore=131.1022;InbreedingCoeff=0.9842;MQ=82.97;MQ0=0;MQRankSum=-2.784;QD=50.48;ReadPosRankSum=0.977;VQSLOD=3.8487;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,111,3343	0/0:13,0:13:39.13:0,39,1171	0/0:20,0:20:54.17:0,54,1503	0/0:19,0:18:45.14:0,45,1216	0/0:18,0:18:54.17:0,54,1614	0/0:22,0:22:62.30:0,62,1954	0/0:27,0:27:81.25:0,81,2457	0/0:24,0:24:69.23:0,69,2018	0/0:14,0:14:42.14:0,42,1257	0/0:24,0:24:69.17:0,69,1992	0/0:15,0:15:36.12:0,36,1156	0/0:30,0:30:90.31:0,90,2775	0/0:22,0:22:63.22:0,63,1894	0/0:29,0:29:87.26:0,87,2498	0/0:24,0:24:72.22:0,72,2094	1/1:0,15:15:39.13:852,39,0	0/0:31,0:31:93.32:0,93,2779	0/0:24,0:24:72.20:0,72,2143	0/0:18,0:18:54.12:0,54,1422	0/0:20,0:20:57.20:0,57,1756	0/0:52,0:52:99:0,150,4458	0/0:21,0:21:60.21:0,60,1735	0/0:21,0:21:60.21:0,60,1857	0/0:23,0:23:66.21:0,66,1897	0/0:23,0:23:56.94:0,57,1706	0/0:21,0:21:63.22:0,63,1965	0/0:23,0:23:66.23:0,66,2048	0/0:5,0:5:15.05:0,15,484
chr10	55220668	.	A	AGATGATGATGATGATGAT	20328.36	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=10.015;DP=732;FS=3.592;HRun=0;HaplotypeScore=383.9014;InbreedingCoeff=0.9243;MQ=69.19;MQ0=0;MQRankSum=-12.346;QD=51.73;ReadPosRankSum=-3.497;VQSLOD=2.7446;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:78.27:0,78,3438	1/1:11,0:11:9.03:498,9,0	0/0:29,0:29:30.09:0,30,902	0/0:34,0:34:48.11:0,48,1188	0/0:27,0:27:66.23:0,66,2718	1/1:28,0:28:24.07:1234,24,0	1/1:25,0:25:16.60:778,17,0	1/1:38,0:36:51.17:2227,51,0	1/1:35,0:38:27.09:1644,27,0	1/1:41,0:41:54.19:2587,54,0	1/1:19,0:19:6.02:287,6,0	0/0:25,0:25:54.19:0,54,2525	0/0:27,0:27:72.25:0,72,3255	0/0:37,0:37:87.30:0,87,3642	1/1:23,0:24:15.05:692,15,0	1/1:19,7:29:40.02:3285,40,0	0/0:28,0:28:63.19:0,63,2450	0/0:20,0:20:39.13:0,39,1708	1/1:27,0:27:33.11:1949,33,0	1/1:17,0:17:15.03:724,15,0	1/1:15,0:15:3.01:137,3,0	0/0:21,0:21:42.14:0,42,1839	0/0:24,0:24:60.19:0,60,2624	0/0:30,0:30:72.25:0,72,3068	1/1:23,0:23:9.03:480,9,0	1/1:22,0:22:33.11:1869,33,0	1/1:26,0:26:27.09:1527,27,0	1/1:10,0:10:6.02:411,6,0
chr10	55221786	.	A	AC	1389.65	PASS	AB=0.773;AC=34;AF=0.607;AN=56;BaseQRankSum=-2.783;DP=458;FS=15.892;HRun=10;HaplotypeScore=57.5721;InbreedingCoeff=-0.1605;MQ=84.07;MQ0=0;MQRankSum=-3.194;QD=3.51;ReadPosRankSum=0.758;VQSLOD=-0.4247;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:10,8:20:5.48:73,5,0	0/1:1,3:4:18.63:26,0,19	0/0:13,0:15:5.04:0,5,161	0/1:25,0:25:3.45:3,0,224	0/1:15,0:15:18.23:18,0,19	1/1:9,8:17:9.02:95,9,0	0/1:9,10:19:34.45:34,0,38	1/1:13,5:18:14.97:137,15,0	0/1:8,9:17:9.53:105,0,10	0/1:3,7:10:0.04:0,0,0	0/1:14,0:14:0:0,0,0	1/1:5,11:16:3.01:32,3,0	0/0:23,0:23:29.87:0,30,245	0/1:14,0:15:37.27:37,0,83	0/0:10,14:24:5.98:0,6,48	1/1:21,0:23:48.88:210,49,0	0/1:5,19:25:9.18:96,0,9	0/1:8,6:14:68.81:69,0,77	0/1:11,4:15:33.93:70,0,34	0/1:20,0:20:20.07:20,0,61	0/1:11,12:23:18.63:26,0,19	1/1:7,2:9:3.01:32,3,0	1/1:14,0:14:11.99:106,12,0	0/1:3,12:15:6.56:142,0,7	0/1:8,0:8:11.87:49,0,12	1/1:8,6:14:9:87,9,0	0/1:10,13:23:20.02:20,0,61	1/1:3,0:3:6:56,6,0
chr10	55221787	.	C	CCA	740.06	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-3.435;DP=465;FS=8.930;HRun=0;HaplotypeScore=72.0950;InbreedingCoeff=0.6564;MQ=82.94;MQ0=0;MQRankSum=-0.233;QD=30.84;ReadPosRankSum=4.491;VQSLOD=4.9276;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:19.88:0,20,252	0/0:4,0:4:5.61:0,6,56	0/0:15,0:15:26.94:0,27,393	0/0:24,0:24:56.25:0,56,582	0/0:15,0:15:18.85:0,19,170	0/0:18,0:18:24.96:0,25,173	0/0:20,0:20:4.82:0,5,187	0/0:16,0:16:34.68:0,35,212	0/0:17,0:17:26.35:0,26,202	0/0:11,0:11:15.37:0,15,113	0/0:14,0:14:32.73:0,33,285	0/0:15,0:15:11.60:0,12,88	0/0:23,0:23:56.97:0,57,666	0/0:15,0:15:38.91:0,39,392	0/0:25,0:25:18:0,18,195	1/1:6,18:24:32.73:834,33,0	0/0:25,0:25:14.35:0,14,137	0/0:15,0:15:29.68:0,30,303	0/0:14,0:14:29.16:0,29,242	0/0:21,0:21:48.07:0,48,447	0/0:24,0:24:23.57:0,24,203	0/0:10,0:10:14.42:0,14,112	0/0:15,0:15:16.67:0,17,153	0/0:15,0:15:21.99:0,22,147	0/0:8,0:8:18.08:0,18,160	0/0:14,0:14:38.94:0,39,301	0/0:24,0:24:29.42:0,29,286	0/0:4,0:4:3.26:0,3,10
chr10	55222292	.	T	TATC	1176.99	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-5.202;DP=568;FS=12.189;HRun=0;HaplotypeScore=84.4972;InbreedingCoeff=0.9664;MQ=92.41;MQ0=0;MQRankSum=-4.621;QD=56.05;ReadPosRankSum=-0.011;VQSLOD=4.7138;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:93.32:0,93,1513	0/0:9,0:9:24.08:0,24,392	0/0:30,0:30:84.15:0,84,1288	0/0:22,0:22:51.10:0,51,770	0/0:21,0:21:63.21:0,63,1013	0/0:21,0:21:60.20:0,60,975	0/0:15,0:15:42.12:0,42,660	0/0:28,0:28:72.21:0,72,1085	0/0:18,0:18:54.17:0,54,857	0/0:18,0:18:54.18:0,54,872	0/0:18,0:18:51.06:0,51,831	0/0:25,0:25:75.24:0,75,1200	0/0:23,0:23:66.23:0,66,1075	0/0:21,0:21:57.18:0,57,906	0/0:20,0:20:57.17:0,57,905	1/1:0,21:21:57.20:1272,57,0	0/0:24,0:24:72.18:0,72,1093	0/0:24,0:24:72.25:0,72,1176	0/0:19,0:19:54.16:0,54,833	0/0:23,0:23:66.21:0,66,1053	0/0:32,0:32:93.32:0,93,1518	0/0:9,0:9:27.09:0,27,441	0/0:10,0:10:27.08:0,27,417	0/0:27,0:27:81.23:0,81,1294	0/0:18,0:18:51.17:0,51,829	0/0:14,0:14:39.13:0,39,637	0/0:23,0:21:63.17:0,63,957	0/0:4,0:4:12.04:0,12,196
chr10	55223427	.	C	CT	6155.70	PASS	AB=0.593;AC=25;AF=0.446;AN=56;BaseQRankSum=-13.166;DP=505;FS=4.778;HRun=8;HaplotypeScore=49.1050;InbreedingCoeff=0.9179;MQ=65.57;MQ0=0;MQRankSum=0.161;QD=27.98;ReadPosRankSum=1.490;VQSLOD=5.4583;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:81.02:0,81,735	0/0:11,0:11:33.02:0,33,302	0/0:11,0:10:25.06:0,25,206	0/0:14,0:12:16.02:0,16,151	0/0:31,0:31:78:0,78,701	1/1:1,19:19:57.17:658,57,0	1/1:0,6:7:17.89:188,18,0	0/0:39,0:38:96.04:0,96,878	1/1:2,15:17:39.12:450,39,0	1/1:2,19:21:32.79:630,33,0	0/1:5,10:16:18.99:290,0,19	0/0:19,0:19:44.99:0,45,407	0/0:14,0:14:39.02:0,39,357	0/0:15,0:15:45:0,45,403	1/1:4,5:9:10.27:106,10,0	0/0:14,0:14:42.02:0,42,384	0/0:26,0:26:71.99:0,72,646	0/0:19,0:19:53.43:0,53,493	1/1:4,15:20:50.95:541,51,0	1/1:3,18:21:54.09:593,54,0	1/1:1,12:13:33.10:381,33,0	0/0:10,0:10:30.01:0,30,272	0/0:21,0:21:54:0,54,486	0/0:7,0:7:18.01:0,18,165	1/1:1,13:14:39.12:450,39,0	1/1:1,24:25:72.21:830,72,0	1/1:3,19:22:48.14:554,48,0	1/1:0,15:15:42.12:485,42,0
chr10	55225109	.	A	AGGTAGGGGGTGGG	6239.44	PASS	AB=0.600;AC=45;AF=0.978;AN=46;BaseQRankSum=-1.673;DP=85;FS=0.000;HRun=0;HaplotypeScore=47.9912;InbreedingCoeff=0.0057;MQ=40.49;MQ0=0;MQRankSum=-0.717;QD=77.03;ReadPosRankSum=-1.493;VQSLOD=3.6588;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,0:4:9.03:412,9,0	./.	./.	0/1:1,0:1:0:0,0,0	1/1:0,0:1:3.01:45,3,0	1/1:2,0:2:3.01:147,3,0	1/1:8,0:8:9.03:433,9,0	1/1:3,0:4:9.03:199,9,0	1/1:3,0:4:11.93:430,12,0	1/1:2,0:2:6.01:163,6,0	1/1:2,0:2:3.01:178,3,0	1/1:6,0:8:14.28:710,14,0	1/1:2,0:2:6.02:350,6,0	1/1:3,0:5:15.05:562,15,0	1/1:1,0:1:3:25,3,0	1/1:1,0:1:3.01:177,3,0	1/1:2,0:2:3.01:175,3,0	1/1:3,0:3:3:25,3,0	1/1:6,0:6:15.05:459,15,0	1/1:2,0:2:3.01:44,3,0	1/1:4,0:5:6.02:89,6,0	1/1:2,0:3:6.02:220,6,0	./.	1/1:5,0:7:21.07:860,21,0	./.	1/1:4,0:5:15.05:493,15,0	1/1:0,0:1:3.01:45,3,0	./.
chr10	55226391	.	TG	T	8895.41	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=11.826;DP=646;FS=0.622;HRun=7;HaplotypeScore=65.3938;InbreedingCoeff=0.9961;MQ=85.03;MQ0=0;MQRankSum=-3.938;QD=25.64;ReadPosRankSum=0.859;VQSLOD=5.3860;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,120,1462	1/1:1,5:6:15.03:153,15,0	0/0:27,0:27:69.88:0,70,855	0/0:15,0:15:36.11:0,36,444	0/0:16,0:16:48.15:0,48,604	1/1:1,10:11:21.05:214,21,0	1/1:2,23:25:60.13:612,60,0	1/1:1,27:28:81.14:806,81,0	1/1:3,24:27:66.15:673,66,0	1/1:1,27:28:79.03:784,79,0	1/1:0,13:13:39.05:387,39,0	0/0:30,0:30:66.28:0,66,1050	0/0:22,0:22:60.19:0,60,744	0/0:23,0:23:54.16:0,54,656	1/1:2,23:25:57.13:581,57,0	1/1:5,19:24:48.10:490,48,0	0/0:37,0:37:99:0,105,1307	0/0:17,0:17:45.14:0,45,566	1/1:4,16:19:45.06:445,45,0	1/1:1,24:25:66.15:672,66,0	1/1:2,36:38:96.22:980,96,0	0/0:19,0:19:54.16:0,54,664	0/0:24,0:24:69.19:0,69,829	0/0:26,0:26:69.21:0,69,852	1/1:2,18:20:51.11:520,51,0	1/1:1,28:29:84.17:844,84,0	1/1:2,20:22:54.12:550,54,0	1/1:0,6:6:18.04:184,18,0
chr10	55226798	.	CG	C	800.21	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=1.112;DP=727;FS=8.635;HRun=2;HaplotypeScore=102.0073;InbreedingCoeff=0.9441;MQ=79.29;MQ0=0;MQRankSum=-2.811;QD=34.79;ReadPosRankSum=0.342;VQSLOD=3.1638;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,144,2092	0/0:3,0:3:8.99:0,9,109	0/0:19,0:19:50.90:0,51,683	0/0:16,0:16:42.12:0,42,591	0/0:23,0:23:66.17:0,66,960	0/0:20,0:20:60.20:0,60,897	0/0:26,0:26:78.24:0,78,1124	0/0:24,0:24:66.13:0,66,918	0/0:22,0:22:63.20:0,63,915	0/0:26,0:26:72.24:0,72,1060	0/0:19,0:19:57.19:0,57,852	0/0:20,0:20:60.19:0,60,880	0/0:33,0:33:90.26:0,90,1303	0/0:36,0:36:99:0,105,1549	0/0:23,0:23:69.23:0,69,1027	1/1:0,23:23:69.22:895,69,0	0/0:38,0:38:99:0,111,1638	0/0:32,0:32:96.31:0,96,1409	0/0:17,0:17:48.15:0,48,697	0/0:22,0:22:66.21:0,66,966	0/0:57,0:57:99:0,172,2508	0/0:29,0:29:87.29:0,87,1302	0/0:11,0:11:30.10:0,30,449	0/0:45,0:45:99:0,135,1994	0/0:23,0:23:63.20:0,63,924	0/0:32,0:32:93.30:0,93,1369	0/0:29,0:29:87.26:0,87,1249	0/0:11,0:11:33.09:0,33,469
chr10	55229595	.	GAC	G	2478.42	PASS	AB=1.000;AC=25;AF=0.446;AN=56;BaseQRankSum=18.413;DP=614;FS=5.633;HRun=0;HaplotypeScore=119.2705;InbreedingCoeff=0.5302;MQ=77.06;MQ0=0;MQRankSum=-2.824;QD=7.23;ReadPosRankSum=5.081;VQSLOD=2.8136;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,113,2024	0/1:6,0:6:6.43:28,0,6	0/0:18,0:18:40.94:0,41,705	0/0:19,0:18:28.69:0,29,628	0/0:8,0:8:19.42:0,19,329	1/1:11,1:12:32.76:178,33,0	1/1:34,0:34:26.77:214,27,0	0/1:26,0:26:72.94:121,0,73	1/1:27,0:27:56.86:282,57,0	1/1:25,1:26:4.47:197,4,0	0/1:17,0:17:5.93:146,0,6	0/0:22,0:22:66.10:0,66,1161	0/0:28,0:28:81.24:0,81,1534	0/0:19,0:19:54.18:0,54,1047	1/1:23,1:24:9.15:190,9,0	1/1:18,0:18:22.47:153,22,0	0/0:37,0:37:99:0,108,2037	0/0:21,0:21:63.22:0,63,1267	0/1:19,0:19:48.82:76,0,49	1/1:11,1:12:10.07:131,10,0	1/1:46,0:46:28.32:314,28,0	0/0:18,0:18:54.09:0,54,945	0/0:10,0:10:21.07:0,21,392	0/0:32,0:32:93.25:0,93,1724	0/1:20,0:19:19.39:144,0,19	0/1:23,0:23:0.82:158,0,1	1/1:27,0:27:48.13:313,48,0	0/1:6,0:6:8.98:37,0,9
chr10	55229596	.	ACC	A	9816.53	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=14.204;DP=617;FS=2.673;HRun=9;HaplotypeScore=96.7760;InbreedingCoeff=0.9905;MQ=76.90;MQ0=0;MQRankSum=-3.024;QD=28.87;ReadPosRankSum=2.922;VQSLOD=5.1074;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:40:99:0,110,1645	1/1:1,5:6:12.03:140,12,0	0/0:18,0:18:42.10:0,42,573	0/0:17,0:18:34.44:0,34,452	0/0:9,0:9:23.55:0,24,325	1/1:1,11:12:36.11:415,36,0	1/1:2,31:33:72.21:839,72,0	1/1:5,21:26:63.17:733,63,0	1/1:1,26:27:72.21:839,72,0	1/1:3,23:26:69.19:802,69,0	1/1:2,15:17:42.12:489,42,0	0/0:22,0:22:57.19:0,57,900	0/0:27,0:27:75.26:0,75,1222	0/0:19,0:20:60.14:0,60,878	1/1:2,21:23:60.18:699,60,0	1/1:1,17:18:51.14:594,51,0	0/0:38,0:39:99:0,108,1671	0/0:21,0:21:63.22:0,63,1033	1/1:4,15:19:45.09:509,45,0	1/1:1,11:12:30.04:331,30,0	1/1:3,43:46:99:1224,105,0	0/0:17,0:19:50.14:0,50,743	0/0:10,0:10:21.52:0,22,299	0/0:33,0:33:87.29:0,87,1397	1/1:3,17:19:41.93:489,42,0	1/1:2,21:23:60.18:698,60,0	1/1:1,25:26:75.22:874,75,0	1/1:1,5:6:12.03:140,12,0
chr10	55231340	.	T	TC	16363.81	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=-17.313;DP=801;FS=1.507;HRun=2;HaplotypeScore=70.9659;InbreedingCoeff=0.9996;MQ=59.80;MQ0=6;MQRankSum=-1.287;QD=37.70;ReadPosRankSum=0.433;VQSLOD=5.4007;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:50,1:51:99:0,104,1741	1/1:2,13:15:33.11:475,33,0	0/0:20,0:10:24.05:0,24,266	0/0:22,0:16:34.86:0,35,383	0/0:28,0:28:66.16:0,66,790	1/1:0,18:18:45.15:648,45,0	1/1:2,36:38:96.32:1376,96,0	1/1:5,29:30:84.27:1189,84,0	1/1:1,29:30:84.28:1210,84,0	1/1:0,40:41:99:1585,116,0	1/1:0,16:16:42.14:604,42,0	0/0:34,0:34:99:0,102,1264	0/0:27,0:27:81.23:0,81,980	0/0:24,0:24:72.19:0,72,876	1/1:0,21:21:57.19:821,57,0	1/1:0,27:27:72.24:1037,72,0	0/0:37,0:37:99:0,108,1325	0/0:38,0:38:99:0,111,1362	1/1:1,16:17:48.16:691,48,0	1/1:0,17:17:48.09:665,48,0	1/1:3,47:50:99:1598,111,0	0/0:26,0:26:72.07:0,72,848	0/0:17,0:17:48.15:0,48,592	0/0:43,0:42:99:0,120,1486	1/1:0,23:23:63.21:907,63,0	1/1:1,30:31:87.27:1226,87,0	1/1:0,37:37:99:1512,105,0	1/1:0,19:19:57.19:820,57,0
chr10	55232992	.	AG	A	975.68	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.955;DP=706;FS=2.566;HRun=9;HaplotypeScore=73.7484;InbreedingCoeff=0.9586;MQ=71.96;MQ0=0;MQRankSum=0.755;QD=21.21;ReadPosRankSum=0.972;VQSLOD=4.5444;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:40,2:42:44.34:0,44,1008	1/1:3,8:11:27.01:246,27,0	0/0:22,0:19:7.56:0,8,310	0/0:24,0:21:28.76:0,29,309	0/0:24,0:24:66.20:0,66,761	0/0:20,0:21:37.14:0,37,593	0/0:27,1:28:41.74:0,42,734	0/0:20,0:20:48.08:0,48,520	0/0:24,1:25:44.75:0,45,769	0/0:31,0:32:75.04:0,75,820	0/0:19,0:19:51.14:0,51,578	0/0:29,0:29:72.19:0,72,812	0/0:23,1:24:32.69:0,33,611	0/0:16,0:16:48.13:0,48,544	0/0:36,0:36:90.23:0,90,1008	1/1:2,33:35:93.05:851,93,0	0/0:28,0:28:78.22:0,78,890	0/0:21,1:22:23.65:0,24,510	0/0:14,0:14:39.10:0,39,435	0/0:27,0:27:57.17:0,57,658	0/0:33,0:33:86.23:0,86,956	0/0:22,0:22:54.15:0,54,615	0/0:20,1:21:32.72:0,33,630	0/0:38,0:37:99:0,99,1113	0/0:26,0:26:63.19:0,63,726	0/0:29,1:31:44.56:0,45,732	0/0:25,0:25:57.17:0,57,658	0/0:10,0:10:30.09:0,30,345
chr10	55233709	.	CA	C	464.54	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=1.660;DP=614;FS=0.719;HRun=12;HaplotypeScore=73.4376;InbreedingCoeff=0.8839;MQ=63.19;MQ0=0;MQRankSum=0.475;QD=14.52;ReadPosRankSum=-3.945;VQSLOD=2.9237;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:30:71.96:0,72,704	0/0:8,0:8:23.84:0,24,226	0/0:13,0:13:15.02:0,15,147	0/0:12,1:12:5.80:0,6,38	0/0:29,1:32:61.59:0,62,758	0/0:24,0:26:68.81:0,69,667	0/0:21,0:21:54.05:0,54,531	1/1:6,26:32:57.09:559,57,0	0/0:30,1:31:81.09:0,81,800	0/0:28,0:29:62.90:0,63,606	0/0:21,1:22:33.84:0,34,514	0/0:16,0:17:41.89:0,42,400	0/0:28,0:28:66.01:0,66,633	0/0:17,0:17:48.07:0,48,475	0/0:17,0:17:42.07:0,42,421	0/0:3,0:22:39.91:0,40,211	0/0:21,0:23:53.92:0,54,524	0/0:14,0:14:33.07:0,33,335	0/0:13,0:14:35.91:0,36,349	0/0:26,0:26:63.12:0,63,634	0/0:14,0:14:27.05:0,27,274	0/0:30,1:31:48.89:0,49,665	0/0:20,0:20:44.90:0,45,429	0/0:17,0:18:50.91:0,51,488	0/0:11,0:11:27.05:0,27,274	0/0:36,0:36:96.18:0,96,969	0/0:32,0:32:84.08:0,84,829	0/0:13,0:15:26.01:0,26,303
chr10	55233920	.	C	CAT	7332.71	PASS	AB=0.941;AC=26;AF=0.464;AN=56;BaseQRankSum=-5.237;DP=650;FS=0.000;HRun=0;HaplotypeScore=129.0264;InbreedingCoeff=0.5481;MQ=59.10;MQ0=42;MQRankSum=1.883;QD=21.32;ReadPosRankSum=1.263;VQSLOD=4.7280;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:26:51.17:0,51,756	1/1:14,0:14:12.23:446,12,0	0/0:38,0:12:26.76:0,27,396	0/0:67,0:29:67.71:0,68,989	0/0:9,0:9:21.03:0,21,281	1/1:28,0:26:31.52:406,32,0	1/1:16,0:16:30.57:461,31,0	0/1:24,0:22:25.56:580,0,26	1/1:18,0:17:40.45:614,40,0	0/1:15,18:32:34.69:823,0,35	1/1:22,0:21:45.02:709,45,0	0/0:27,0:24:51.10:0,51,694	0/0:26,0:24:57.19:0,57,864	0/0:18,0:17:30.08:0,30,450	1/1:17,0:14:27.09:413,27,0	0/1:16,0:16:21.96:22,0,292	0/0:23,0:22:57.10:0,57,714	0/0:8,0:7:21.07:0,21,297	0/1:22,0:22:35.62:395,0,36	1/1:18,0:18:36.04:565,36,0	1/1:11,20:25:9.03:113,9,0	0/0:20,0:18:39.01:0,39,578	0/0:13,0:13:8.87:0,9,137	0/0:29,0:27:54.04:0,54,682	1/1:14,0:14:26.96:416,27,0	0/1:26,0:25:99:337,0,133	1/1:25,1:26:33.28:695,33,0	0/1:19,0:15:22.57:338,0,23
chr10	55233966	.	CTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	C	1603.25	PASS	AB=0.875;AC=13;AF=0.295;AN=44;BaseQRankSum=3.149;DP=355;FS=16.153;HRun=0;HaplotypeScore=188.5789;InbreedingCoeff=0.5128;MQ=37.22;MQ0=52;MQRankSum=-3.188;QD=19.79;ReadPosRankSum=1.742;VQSLOD=1.9254;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:33:48.16:0,48,3668	./.	./.	./.	0/0:8,0:10:2.94:0,3,18	1/1:13,0:13:3.01:252,3,0	0/0:9,0:6:0.47:0,0,1	0/0:13,0:11:3.01:0,3,106	1/1:5,1:6:6.02:403,6,0	1/1:10,0:9:2.99:215,3,0	./.	0/0:14,0:11:9.50:0,10,485	0/0:12,0:11:14.98:0,15,954	0/0:20,0:19:18.52:0,19,1779	1/1:5,2:5:3.01:116,3,0	0/0:7,0:6:0:0,0,0	0/0:30,0:29:55.39:0,55,3172	0/0:9,0:7:15.05:0,15,1223	0/0:9,0:5:0:0,0,0	1/1:6,2:8:3.01:259,3,0	0/0:22,0:13:0.89:0,1,2	0/0:11,0:7:6.49:0,6,456	1/1:8,0:14:0.39:1,0,0	0/0:29,0:25:41.49:0,41,2821	./.	0/0:11,0:11:0.47:0,0,1	0/1:12,1:14:0.04:476,0,0	./.
chr10	55234132	.	AAAC	A	2805.23	PASS	AB=1.000;AC=33;AF=0.589;AN=56;BaseQRankSum=7.033;DP=540;FS=21.946;HRun=0;HaplotypeScore=88.4853;InbreedingCoeff=0.7146;MQ=58.65;MQ0=8;MQRankSum=-7.480;QD=9.74;ReadPosRankSum=-10.163;VQSLOD=-0.6938;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:58.86:0,59,974	0/1:9,0:9:25.66:26,0,27	0/0:29,0:9:5.07:0,5,108	0/1:15,0:8:5.09:5,0,63	0/0:23,0:23:33.98:0,34,708	1/1:9,1:10:26.23:202,26,0	1/1:12,0:12:12.07:120,12,0	1/1:20,0:18:41.48:269,41,0	1/1:10,0:9:19.02:170,19,0	1/1:25,0:25:27.88:271,28,0	1/1:22,0:21:21.37:217,21,0	0/0:19,0:19:14.35:0,14,194	0/0:20,0:19:29.07:0,29,324	0/0:12,0:12:26.37:0,26,220	1/1:3,16:17:1.25:3,1,0	1/1:18,0:17:14.07:275,14,0	0/0:40,0:39:62.33:0,62,700	0/1:18,0:18:20.01:20,0,221	1/1:11,0:9:21.37:162,21,0	1/1:15,1:16:47.46:329,47,0	1/1:14,0:13:4.76:22,5,0	0/0:17,0:17:37.63:0,38,305	0/0:18,0:18:25.90:0,26,454	0/0:42,0:42:69.44:0,69,1129	1/1:12,0:12:6.60:30,7,0	1/1:2,19:21:35.70:259,36,0	1/1:21,1:22:46.52:340,47,0	1/1:14,0:14:36.44:296,36,0
chr10	55234133	.	AAC	A	3004.70	PASS	AB=1.000;AC=35;AF=0.625;AN=56;BaseQRankSum=8.189;DP=538;FS=32.947;HRun=0;HaplotypeScore=81.0863;InbreedingCoeff=0.7280;MQ=58.80;MQ0=7;MQRankSum=-7.753;QD=9.85;ReadPosRankSum=-9.261;VQSLOD=-0.0588;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:54.23:0,54,750	1/1:9,0:9:6.55:52,7,0	0/0:27,0:9:4.45:0,4,100	0/1:14,0:8:5.17:5,0,49	0/0:25,0:25:20.36:0,20,558	1/1:10,0:10:26.84:207,27,0	1/1:12,0:12:16.91:138,17,0	1/1:20,0:18:42.47:280,42,0	1/1:10,0:9:23.21:165,23,0	1/1:27,0:27:33.84:306,34,0	1/1:21,0:20:26.31:223,26,0	0/1:19,0:19:0.85:1,0,113	0/0:19,0:18:26.20:0,26,232	0/0:12,0:12:11.74:0,12,181	1/1:19,0:17:1.36:3,1,0	1/1:17,0:16:39.02:282,39,0	0/0:40,0:39:40.43:0,40,444	0/1:18,0:18:36.03:36,0,153	1/1:11,0:9:23.50:171,23,0	1/1:16,0:16:47.52:333,48,0	1/1:14,0:13:4.82:35,5,0	0/0:16,1:17:30.40:0,30,233	0/0:19,0:19:21.99:0,22,369	0/0:41,0:41:74.61:0,75,906	1/1:2,10:12:5.46:27,5,0	1/1:20,1:21:36.21:266,36,0	1/1:21,0:21:54.43:370,54,0	1/1:14,0:14:41.29:309,41,0
chr10	55234143	.	A	AC	2163.95	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=11.419;DP=469;FS=4.636;HRun=1;HaplotypeScore=75.7807;InbreedingCoeff=0.9229;MQ=68.66;MQ0=6;MQRankSum=-2.386;QD=11.70;ReadPosRankSum=-3.088;VQSLOD=0.8360;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:75.05:0,75,880	1/1:2,7:9:11.88:95,12,0	0/0:25,0:12:15.76:0,16,275	0/0:15,0:10:4.10:0,4,150	0/0:26,0:26:69.15:0,69,820	1/1:8,0:8:23.80:183,24,0	1/1:6,0:6:14.95:119,15,0	1/1:22,0:20:43.95:318,44,0	1/1:7,0:7:18.59:105,19,0	1/1:1,18:24:38.72:263,39,0	1/1:13,0:13:20.77:145,21,0	0/0:17,0:17:36.03:0,36,394	0/0:20,0:19:38.95:0,39,412	0/0:11,0:11:21.03:0,21,241	1/1:16,0:14:8.72:70,9,0	0/0:10,0:9:26.77:0,27,202	0/0:31,0:31:69.11:0,69,823	0/0:15,0:15:27.05:0,27,316	1/1:13,0:11:11.81:153,12,0	1/1:13,0:13:33.40:225,33,0	1/1:10,0:9:3:27,3,0	0/0:19,0:19:38.96:0,39,418	0/0:21,0:21:47.73:0,48,576	0/0:41,0:41:90.17:0,90,1072	1/1:9,0:9:8.96:70,9,0	1/1:11,0:11:20.68:156,21,0	1/1:16,0:16:34.91:252,35,0	1/1:8,0:8:23.83:204,24,0
chr10	55234209	.	AC	A	264.21	PASS	AB=0.538;AC=1;AF=0.018;AN=56;BaseQRankSum=3.146;DP=535;FS=1.168;HRun=3;HaplotypeScore=65.9761;InbreedingCoeff=0.0959;MQ=76.35;MQ0=0;MQRankSum=-0.482;QD=18.87;ReadPosRankSum=-0.159;VQSLOD=3.2425;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:60.20:0,60,864	0/0:10,0:10:27.09:0,27,388	0/0:16,0:16:39.07:0,39,498	0/0:12,0:12:1.90:0,2,404	0/0:23,0:23:57.19:0,57,820	0/0:17,0:17:48.16:0,48,691	0/0:20,0:20:60.17:0,60,840	0/0:21,0:21:63.16:0,63,850	0/0:15,0:15:42.10:0,42,581	0/0:18,0:18:48.16:0,48,690	0/0:19,0:19:51.17:0,51,733	0/0:24,0:24:69.23:0,69,992	0/0:17,0:17:45.15:0,45,647	0/0:11,0:11:33.11:0,33,474	0/0:19,0:19:35.94:0,36,498	0/1:2,12:14:10.10:339,0,10	0/0:32,0:32:81.27:0,81,1165	0/0:18,0:18:54.18:0,54,777	0/0:15,0:15:45.14:0,45,629	0/0:26,0:26:75.25:0,75,1074	0/0:18,0:18:51.17:0,51,734	0/0:17,0:17:51.16:0,51,713	0/0:17,0:17:45.15:0,45,648	0/0:39,0:39:99:0,108,1541	0/0:14,0:14:39.09:0,39,537	0/0:14,0:14:39.13:0,39,561	0/0:30,0:30:90.30:0,90,1282	0/0:14,0:14:42.14:0,42,604
chr10	55234707	.	G	GCCC	10191.84	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=13.604;DP=549;FS=2.332;HRun=6;HaplotypeScore=96.0562;InbreedingCoeff=0.9855;MQ=70.50;MQ0=7;MQRankSum=-4.692;QD=36.40;ReadPosRankSum=-0.738;VQSLOD=3.6398;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:81.22:0,81,1126	1/1:6,0:7:8.73:83,9,0	0/0:16,0:16:39.12:0,39,435	0/0:24,0:22:20.47:0,20,430	0/0:27,0:27:72.20:0,72,979	1/1:3,24:27:51.07:924,51,0	1/1:4,21:24:45.02:824,45,0	1/1:4,0:21:52.84:588,53,0	1/1:5,15:19:39.13:829,39,0	1/1:7,14:21:38.86:687,39,0	1/1:4,10:16:33.01:555,33,0	0/0:22,0:22:57.19:0,57,807	0/0:23,0:23:66.18:0,66,899	0/0:18,0:18:45.09:0,45,594	1/1:1,16:17:29.94:637,30,0	1/1:4,0:12:32.87:255,33,0	0/0:32,0:32:90.26:0,90,1254	0/0:15,0:15:42.11:0,42,575	1/1:1,6:7:17.99:283,18,0	1/1:1,21:22:51.53:987,52,0	1/1:2,11:13:17.95:293,18,0	0/0:14,0:14:42.14:0,42,594	0/0:15,0:15:42.13:0,42,595	0/0:31,0:31:75.15:0,75,984	1/1:2,9:10:21.07:421,21,0	1/1:2,16:20:42.13:848,42,0	1/1:2,29:31:84.22:1666,84,0	1/1:0,6:6:15.05:312,15,0
chr10	55234723	.	C	CAT	5092.96	PASS	AB=1.000;AC=31;AF=0.554;AN=56;BaseQRankSum=11.770;DP=532;FS=3.340;HRun=0;HaplotypeScore=102.0410;InbreedingCoeff=0.9111;MQ=63.81;MQ0=4;MQRankSum=-2.122;QD=19.51;ReadPosRankSum=0.106;VQSLOD=4.9300;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:75.22:0,75,1099	1/1:5,1:6:8.03:111,8,0	0/0:22,0:19:21.72:0,22,594	0/0:19,0:16:11.52:0,12,418	0/0:26,0:26:78.23:0,78,1142	1/1:22,0:21:43.68:385,44,0	1/1:24,0:23:37:319,37,0	1/1:11,9:20:48.13:738,48,0	1/1:18,0:18:49.86:401,50,0	1/1:16,1:17:39.05:344,39,0	1/1:11,0:11:28.62:282,29,0	0/0:20,0:20:57.15:0,57,805	0/0:22,0:22:66.18:0,66,938	0/0:17,0:17:48.16:0,48,731	1/1:14,0:14:32.97:275,33,0	0/1:12,0:12:11.20:11,0,74	0/0:37,0:37:99:0,102,1435	0/0:17,0:17:48.02:0,48,635	1/1:10,0:10:17.35:147,17,0	1/1:18,0:18:44.94:382,45,0	1/1:10,0:10:11.22:97,11,0	0/0:12,0:12:36.11:0,36,529	0/0:18,0:18:48.08:0,48,682	0/0:30,0:30:69.17:0,69,1003	1/1:12,0:11:26.92:224,27,0	1/1:20,0:20:50.86:439,51,0	1/1:35,0:35:81.64:695,82,0	1/1:11,0:11:29.87:242,30,0
chr10	55234754	.	A	AT	143.52	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=1.381;DP=459;FS=1.387;HRun=0;HaplotypeScore=76.8580;InbreedingCoeff=0.6507;MQ=71.44;MQ0=0;MQRankSum=0.801;QD=9.57;ReadPosRankSum=-0.590;VQSLOD=3.5630;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:75.25:0,75,1030	0/0:7,0:7:21.04:0,21,256	0/0:11,0:10:21.11:0,21,284	0/1:6,0:6:8.49:8,0,75	0/0:32,0:32:93.26:0,93,1197	0/0:22,0:21:60.16:0,60,794	0/0:11,0:11:30.06:0,30,391	0/0:21,0:21:60.17:0,60,770	0/0:18,0:18:54.18:0,54,737	0/0:16,0:16:48.14:0,48,634	0/0:15,0:15:42.08:0,42,517	0/0:16,0:16:48.16:0,48,658	0/0:17,0:17:51.17:0,51,689	0/0:16,0:16:45.15:0,45,612	0/0:11,0:11:27.08:0,27,357	1/1:4,5:9:18.03:233,18,0	0/0:34,0:34:99:0,99,1313	0/0:22,0:21:63.18:0,63,833	0/0:14,0:14:42.12:0,42,551	0/0:17,0:17:51.14:0,51,658	0/0:4,0:4:12.04:0,12,167	0/0:8,0:8:24.06:0,24,300	0/0:11,0:11:33.11:0,33,447	0/0:21,0:21:57.12:0,57,724	0/0:13,0:13:39.07:0,39,484	0/0:14,0:14:42.14:0,42,574	0/0:33,0:33:96.31:0,96,1280	0/0:11,0:11:33.08:0,33,425
chr10	55236514	.	CA	C	3766.94	PASS	AB=0.857;AC=31;AF=0.574;AN=54;BaseQRankSum=9.482;DP=418;FS=5.823;HRun=12;HaplotypeScore=57.1292;InbreedingCoeff=0.9129;MQ=55.80;MQ0=12;MQRankSum=2.063;QD=16.97;ReadPosRankSum=0.662;VQSLOD=4.8226;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:28:50.29:0,50,266	1/1:3,5:8:11.86:86,12,0	0/0:16,0:8:15.77:0,16,173	./.	0/0:20,0:21:31.16:0,31,434	1/1:0,6:6:17.93:139,18,0	1/1:4,19:23:53.67:407,54,0	1/1:7,12:19:35.84:276,36,0	1/1:1,9:10:26.89:209,27,0	1/1:2,14:14:35.85:278,36,0	1/1:1,12:12:35.86:278,36,0	0/0:15,0:15:24.05:0,24,242	0/1:5,1:6:8.18:8,0,102	0/0:12,0:9:20.99:0,21,197	1/1:1,5:6:14.94:116,15,0	0/0:22,0:21:59.94:0,60,582	0/0:20,1:20:10.53:0,11,346	0/0:13,0:13:33.06:0,33,334	1/1:8,8:14:20.91:162,21,0	1/1:1,9:10:26.90:209,27,0	1/1:2,17:18:47.82:371,48,0	0/0:15,0:15:21.03:0,21,207	0/0:9,0:9:23.99:0,24,222	0/0:18,0:19:47.88:0,48,460	1/1:4,15:18:44.82:348,45,0	1/1:5,22:26:62.73:487,63,0	1/1:5,12:17:35.85:278,36,0	1/1:2,5:5:14.94:116,15,0
chr10	55236630	.	G	GC	2859.33	PASS	AB=0.844;AC=32;AF=0.571;AN=56;BaseQRankSum=-4.896;DP=273;FS=5.207;HRun=8;HaplotypeScore=35.8215;InbreedingCoeff=0.8085;MQ=80.62;MQ0=0;MQRankSum=-0.800;QD=19.19;ReadPosRankSum=-0.691;VQSLOD=2.6621;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:45:0,45,406	1/1:1,0:5:5.68:29,6,0	0/0:12,0:11:20.48:0,20,167	0/1:10,0:9:2.89:3,0,63	0/0:12,0:12:24:0,24,220	1/1:0,5:6:17.89:188,18,0	1/1:4,12:16:30.09:346,30,0	1/1:3,0:9:11.05:62,11,0	1/1:2,9:11:24.07:277,24,0	1/1:1,6:7:15.04:173,15,0	1/1:2,6:8:11.98:123,12,0	0/0:12,0:12:33.01:0,33,301	0/0:14,0:14:27.01:0,27,247	0/0:11,0:11:27.01:0,27,247	1/1:0,8:8:24.07:277,24,0	1/1:1,4:5:12.04:138,12,0	0/0:16,0:15:39.01:0,39,355	0/0:10,0:10:30.02:0,30,275	1/1:1,3:4:9.03:104,9,0	0/1:6,5:11:6.42:177,0,6	1/1:6,15:21:42.12:484,42,0	0/0:3,0:3:6:0,6,55	0/0:4,0:4:6:0,6,55	0/0:11,0:11:26.98:0,27,240	1/1:0,6:6:18.05:208,18,0	1/1:2,7:9:18.05:208,18,0	1/1:0,7:7:15.04:173,15,0	1/1:3,3:6:9.03:104,9,0
chr10	55240317	.	C	CAA	635.83	PASS	AB=0.533;AC=1;AF=0.018;AN=56;BaseQRankSum=-4.571;DP=605;FS=3.990;HRun=1;HaplotypeScore=68.7051;InbreedingCoeff=0.2781;MQ=68.47;MQ0=0;MQRankSum=-0.868;QD=39.74;ReadPosRankSum=0.130;VQSLOD=3.7541;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:93.32:0,93,1511	0/0:10,0:10:30.09:0,30,467	0/0:33,0:33:99:0,99,1512	0/0:17,0:17:47.75:0,48,739	0/0:29,0:29:87.28:0,87,1391	0/0:20,0:20:60.20:0,60,973	0/0:23,0:23:69.21:0,69,1098	0/0:28,0:28:81.24:0,81,1228	0/0:21,0:21:63.22:0,63,1027	0/0:23,0:23:69.23:0,69,1104	0/0:21,0:21:60.19:0,60,952	0/0:28,0:28:84.26:0,84,1319	0/0:17,0:17:48.16:0,48,779	0/0:26,0:26:78.24:0,78,1220	0/0:21,0:21:63.19:0,63,977	0/1:2,14:16:6.82:710,0,7	0/0:18,0:18:51.17:0,51,822	0/0:25,0:25:75.21:0,75,1155	0/0:22,0:22:63.16:0,63,931	0/0:22,0:22:66.20:0,66,1028	0/0:15,0:15:45.11:0,45,660	0/0:10,0:10:30.09:0,30,463	0/0:12,0:12:36.12:0,36,587	0/0:14,0:14:42.14:0,42,674	0/0:30,0:30:90.23:0,90,1415	0/0:22,0:22:63.22:0,63,1027	0/0:37,0:37:99:0,111,1755	0/0:14,0:14:42.10:0,42,656
chr10	55242231	.	CTT	C	7625.96	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=13.080;DP=566;FS=0.000;HRun=11;HaplotypeScore=104.7480;InbreedingCoeff=0.9941;MQ=68.93;MQ0=2;MQRankSum=-0.767;QD=24.60;ReadPosRankSum=0.419;VQSLOD=4.5244;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:46:99:0,126,1826	1/1:1,13:14:39.10:415,39,0	0/0:17,0:11:19.75:0,20,161	0/0:14,0:11:12.68:0,13,136	0/0:13,0:14:38.60:0,39,529	1/1:2,26:28:72.18:766,72,0	1/1:3,19:22:48.10:511,48,0	1/1:6,20:26:60.11:631,60,0	1/1:5,13:18:30.06:319,30,0	1/1:5,17:22:54.07:563,54,0	1/1:5,11:16:27.04:287,27,0	0/0:2,0:18:33.47:0,33,114	0/0:13,0:15:33.72:0,34,474	0/0:16,0:16:42.14:0,42,640	1/1:4,16:19:45.09:479,45,0	1/1:4,19:22:45.08:479,45,0	0/0:26,0:28:74.73:0,75,1099	0/0:31,0:33:89.77:0,90,1301	1/1:8,14:22:45.08:474,45,0	1/1:1,16:17:48.12:511,48,0	1/1:4,12:16:27.04:287,27,0	0/0:3,0:17:30.73:0,31,178	0/0:1,0:17:23.07:0,23,108	0/0:1,0:20:47.41:0,47,163	1/1:0,18:18:54.14:575,54,0	1/1:1,21:22:60.10:626,60,0	1/1:3,16:19:45.11:479,45,0	1/1:0,7:7:21.05:223,21,0
chr10	55244997	.	TAA	T	9383.24	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=13.378;DP=628;FS=14.013;HRun=10;HaplotypeScore=80.2455;InbreedingCoeff=0.9963;MQ=74.97;MQ0=1;MQRankSum=-0.270;QD=28.26;ReadPosRankSum=1.683;VQSLOD=3.5144;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:46:99:0,129,1962	1/1:1,9:10:27.06:301,27,0	0/0:14,0:14:21.03:0,21,287	0/0:11,0:10:13.79:0,14,98	0/0:24,0:25:68.71:0,69,1033	1/1:0,16:16:36.10:401,36,0	1/1:2,17:19:51.14:569,51,0	1/1:4,29:34:81.16:951,81,0	1/1:5,14:19:42.09:468,42,0	1/1:3,20:23:57.14:635,57,0	1/1:1,14:15:39.06:421,39,0	0/0:39,1:40:71.88:0,72,1539	0/0:13,0:13:39.13:0,39,619	0/0:18,0:18:45.14:0,45,689	1/1:1,16:16:42.11:468,42,0	1/1:3,15:18:45.11:502,45,0	0/0:27,0:27:75.24:0,75,1161	0/0:25,0:26:75.25:0,75,1172	1/1:3,21:24:62.88:680,63,0	1/1:2,21:23:60.12:654,60,0	1/1:4,28:32:84.22:937,84,0	0/0:18,0:18:51.17:0,51,807	0/0:24,0:24:66.23:0,66,1045	0/0:33,0:33:96.31:0,96,1488	1/1:3,16:19:42.11:468,42,0	1/1:2,31:33:90.22:992,90,0	1/1:1,18:19:51.14:569,51,0	1/1:0,11:11:33.09:368,33,0
chr10	55245557	.	TA	T	925.70	PASS	AB=0.935;AC=16;AF=0.286;AN=56;BaseQRankSum=-4.836;DP=501;FS=15.500;HRun=5;HaplotypeScore=83.6893;InbreedingCoeff=-0.0410;MQ=78.50;MQ0=1;MQRankSum=-0.646;QD=4.10;ReadPosRankSum=-1.944;VQSLOD=-0.7510;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:72.20:0,72,658	0/1:4,5:9:7.30:39,0,7	0/0:19,0:19:16.28:0,16,330	0/0:18,0:15:14.60:0,15,173	0/0:13,0:13:35.96:0,36,311	0/0:18,0:18:2.16:0,2,67	0/1:35,1:36:67.81:191,0,68	1/1:3,7:10:14.97:137,15,0	0/1:20,1:21:57.45:71,0,57	1/1:12,0:12:0.16:93,0,0	0/1:11,0:11:4.67:5,0,22	0/0:21,0:21:42.03:0,42,386	0/0:19,0:19:51.09:0,51,637	0/0:16,0:16:45.13:0,45,586	0/1:13,0:13:11.42:11,0,31	0/1:10,1:11:28.31:37,0,28	0/0:34,0:34:90.01:0,90,831	0/0:26,0:26:66.05:0,66,674	0/1:12,1:13:6.94:95,0,7	0/1:8,0:8:11.45:15,0,11	0/1:23,0:21:19.99:144,0,20	0/0:18,0:18:41.72:0,42,368	0/0:13,0:13:32.93:0,33,296	0/0:17,0:17:43.97:0,44,368	0/1:21,1:22:4.58:99,0,5	0/1:18,2:20:49.06:103,0,49	0/1:16,1:17:42.76:43,0,44	0/0:7,0:7:9.43:0,9,34
chr10	55245562	.	A	AG	2417.63	PASS	AB=0.919;AC=26;AF=0.464;AN=56;BaseQRankSum=-7.644;DP=487;FS=5.668;HRun=10;HaplotypeScore=84.1537;InbreedingCoeff=-0.2144;MQ=76.82;MQ0=1;MQRankSum=0.435;QD=6.07;ReadPosRankSum=-4.781;VQSLOD=0.9355;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:15,15:31:20.31:350,0,20	0/1:10,0:10:32.18:33,0,32	0/0:20,0:20:13.86:0,14,176	0/1:16,0:13:10.63:11,0,36	1/1:8,2:14:11.27:75,11,0	0/1:17,0:17:12.20:12,0,65	0/1:35,0:35:39.97:40,0,122	0/0:10,1:11:8.55:0,9,48	0/1:21,0:21:33.07:33,0,86	0/1:10,0:10:11.98:34,0,12	0/1:7,0:7:3.87:4,0,29	1/1:6,10:16:8.32:264,8,0	0/0:19,0:20:46.86:0,47,361	0/0:19,0:19:53.85:0,54,425	0/1:12,0:12:30.97:31,0,33	0/0:11,0:11:17.41:0,17,67	1/1:12,23:35:7.89:491,8,0	0/1:12,11:25:99:232,0,119	0/1:14,0:14:22.02:97,0,22	0/1:5,0:5:0.44:34,0,0	0/1:23,0:21:25.24:61,0,25	0/1:8,12:20:7.44:270,0,7	1/1:5,10:15:18.04:191,18,0	0/1:6,11:17:0.67:225,0,1	0/1:20,0:20:23.41:67,0,23	0/1:19,0:19:14.27:14,0,85	0/1:15,0:15:17.05:17,0,66	0/0:7,0:7:10.32:0,10,41
chr10	55245721	.	G	GTCTCTCTC	8084.57	PASS	AB=0.917;AC=31;AF=0.574;AN=54;BaseQRankSum=-3.103;DP=648;FS=1.517;HRun=0;HaplotypeScore=154.4112;InbreedingCoeff=0.6861;MQ=77.49;MQ0=7;MQRankSum=-7.125;QD=19.43;ReadPosRankSum=-2.166;VQSLOD=3.6481;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:35:42.26:0,42,1666	1/1:2,0:5:3.01:65,3,0	0/1:48,0:30:13.76:14,0,141	0/1:67,0:39:32.39:32,0,86	0/0:9,0:10:24.08:0,24,535	1/1:3,12:17:24.08:915,24,0	1/1:9,14:32:14.77:687,15,0	1/1:10,0:28:38.34:540,38,0	1/1:7,12:21:21.07:873,21,0	1/1:4,16:22:48.16:1187,48,0	./.	0/0:24,0:26:59.91:0,60,1304	0/0:15,0:16:36.11:0,36,754	0/0:22,0:23:21.77:0,22,1171	1/1:3,12:17:15.05:503,15,0	0/1:10,0:15:40.60:65,0,41	0/0:26,0:26:51.04:0,51,1184	0/0:15,0:15:30:0,30,583	1/1:11,2:24:36.12:890,36,0	1/1:6,12:18:9.03:248,9,0	1/1:11,17:34:3:25,3,0	0/0:18,0:19:45.14:0,45,1050	0/0:6,0:7:7.24:0,7,155	0/0:44,0:47:99:0,108,2516	1/1:3,12:18:15.04:452,15,0	1/1:12,0:25:35.48:1028,35,0	1/1:2,12:16:9.03:374,9,0	1/1:9,0:9:12.02:188,12,0
chr10	55247718	.	G	GCGTC	1651.41	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-0.787;DP=378;FS=3.745;HRun=0;HaplotypeScore=84.8405;InbreedingCoeff=0.8555;MQ=98.15;MQ0=0;MQRankSum=-4.897;QD=51.61;ReadPosRankSum=-3.594;VQSLOD=3.2305;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:57.19:0,57,1045	1/1:1,6:7:15.05:399,15,0	0/0:17,0:17:27.12:0,27,596	0/0:24,0:25:44.49:0,44,905	0/0:11,0:11:30.08:0,30,507	0/0:13,0:13:39.13:0,39,727	0/0:21,0:21:63.22:0,63,1163	1/1:11,13:25:63.18:1370,63,0	0/0:15,0:15:45.15:0,45,830	0/0:8,0:8:24.08:0,24,448	0/0:4,0:4:9.03:0,9,168	0/0:27,0:27:75.24:0,75,1362	0/0:16,0:16:43.70:0,44,780	0/0:25,0:25:72.23:0,72,1305	0/0:9,0:9:27.09:0,27,504	0/0:12,0:12:33.11:0,33,616	0/0:14,0:14:42.13:0,42,752	0/0:9,0:9:27.09:0,27,504	0/0:9,0:9:24.08:0,24,448	0/0:4,0:4:12.04:0,12,218	0/0:15,0:15:42.14:0,42,783	0/0:13,0:13:33.11:0,33,602	0/0:8,0:8:21.07:0,21,391	0/0:22,0:22:66.23:0,66,1215	0/0:5,0:5:15.05:0,15,280	0/0:13,0:13:39.13:0,39,728	0/0:6,0:6:18.06:0,18,336	0/0:1,0:1:3.01:0,3,56
chr10	55248443	.	AAC	A	815.22	PASS	AB=0.880;AC=3;AF=0.054;AN=56;BaseQRankSum=3.499;DP=1050;FS=0.000;HRun=0;HaplotypeScore=188.9799;InbreedingCoeff=0.6483;MQ=60.29;MQ0=6;MQRankSum=0.194;QD=15.68;ReadPosRankSum=1.925;VQSLOD=3.6866;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:61,3:64:81.45:0,81,2334	0/0:14,0:14:42.14:0,42,693	0/0:63,0:40:68.26:0,68,1043	0/0:51,1:33:26.01:0,26,687	0/0:29,1:30:34.30:0,34,1061	0/0:23,0:23:57.18:0,57,915	0/0:34,0:34:52.72:0,53,1314	0/0:42,0:42:81:0,81,1051	0/0:29,0:29:37.72:0,38,1120	0/0:38,1:39:58.80:0,59,1469	0/0:20,0:20:54.18:0,54,889	0/0:47,0:47:70.83:0,71,1644	0/0:29,0:29:66.18:0,66,1050	0/0:32,2:34:52.73:0,53,1345	0/0:37,1:38:55.69:0,56,1334	1/1:3,27:30:72.06:900,72,0	0/0:51,1:52:82.49:0,82,1862	0/0:39,1:40:45.76:0,46,1448	0/0:21,0:21:48.15:0,48,768	0/1:19,3:22:20.86:21,0,732	0/0:103,5:108:99:0,155,4060	0/0:43,3:46:76.82:0,77,1708	0/0:15,1:16:39.13:0,39,644	0/0:53,0:53:85.75:0,86,1779	0/0:26,0:26:69.20:0,69,1063	0/0:35,0:35:81.27:0,81,1310	0/0:25,1:26:25.66:0,26,921	0/0:17,0:17:44.86:0,45,715
chr10	55248461	.	TAC	T	973.59	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=1.120;DP=1099;FS=0.000;HRun=0;HaplotypeScore=226.9470;InbreedingCoeff=1.0000;MQ=59.54;MQ0=7;MQRankSum=-0.232;QD=23.75;ReadPosRankSum=-3.336;VQSLOD=2.5257;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:71,0:71:99:0,193,3244	0/0:16,0:16:48.16:0,48,825	0/0:57,0:38:87.23:0,87,1326	0/0:49,0:33:46.94:0,47,1208	0/0:30,0:30:78.20:0,78,1243	0/0:22,0:22:66.23:0,66,1136	0/0:35,0:35:90.31:0,90,1544	1/1:11,30:41:70.35:1068,70,0	0/0:34,0:34:93.15:0,93,1561	0/0:42,0:42:99:0,120,1958	0/0:23,0:23:60.19:0,60,1011	0/0:47,0:47:99:0,129,2196	0/0:32,0:32:84.25:0,84,1367	0/0:35,0:35:96.31:0,96,1611	0/0:35,0:36:99:0,102,1719	0/0:32,0:32:90.76:0,91,1184	0/0:53,0:53:99:0,135,2156	0/0:39,1:40:93.93:0,94,1679	0/0:29,0:29:66.23:0,66,1116	0/0:20,0:20:48.16:0,48,795	0/0:129,0:129:99:0,340,5684	0/0:43,0:43:99:0,111,1856	0/0:20,0:20:57.19:0,57,986	0/0:56,0:56:99:0,147,2504	0/0:30,0:30:84.29:0,84,1454	0/0:35,0:35:99:0,102,1705	0/0:25,0:25:75.24:0,75,1241	0/0:17,0:17:46.71:0,47,771
chr10	55249788	.	T	TTTCACA	3016.47	PASS	AB=0.688;AC=15;AF=0.268;AN=56;BaseQRankSum=8.956;DP=617;FS=6.341;HRun=0;HaplotypeScore=140.7505;InbreedingCoeff=-0.1920;MQ=63.42;MQ0=3;MQRankSum=-8.878;QD=11.88;ReadPosRankSum=-5.600;VQSLOD=0.2845;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:42:51.16:0,51,2083	0/0:3,0:10:20.62:0,21,203	0/0:44,0:21:45.21:0,45,747	0/0:42,0:23:65.88:0,66,965	0/0:15,0:18:45.15:0,45,1028	0/1:6,0:23:99:237,0,124	0/1:10,1:23:99:260,0,242	0/1:30,0:34:99:243,0,691	0/1:9,0:16:99:127,0,139	0/1:8,0:18:99:335,0,144	0/1:4,0:18:68.05:232,0,68	0/0:13,0:14:39.11:0,39,725	0/0:18,0:19:49.89:0,50,988	0/0:18,0:22:60.11:0,60,1097	0/1:7,0:22:99:332,0,113	0/0:7,0:21:44.59:0,45,763	0/0:34,0:35:80.87:0,81,1892	0/0:26,0:27:28.40:0,28,1194	0/1:8,0:10:99:201,0,103	0/1:13,0:13:99:235,0,103	0/1:15,0:25:19.38:19,0,415	0/0:16,0:18:45.14:0,45,847	0/0:14,0:14:42.14:0,42,891	0/0:34,0:37:99:0,102,2108	0/1:4,0:18:39.22:220,0,39	0/1:4,0:12:99:253,0,127	0/1:6,0:15:99:278,0,101	1/1:0,0:7:12.03:208,12,0
chr10	55252861	.	G	GTGC	10251.62	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-8.443;DP=445;FS=2.963;HRun=0;HaplotypeScore=76.5952;InbreedingCoeff=0.9319;MQ=61.35;MQ0=0;MQRankSum=-5.049;QD=43.44;ReadPosRankSum=-0.556;VQSLOD=5.9522;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:63.19:0,63,1012	1/1:1,3:5:9.03:170,9,0	0/0:2,0:2:2.50:0,2,9	0/0:5,0:5:6.02:0,6,99	0/0:8,0:8:15.05:0,15,248	1/1:2,17:19:39.13:878,39,0	1/1:6,19:27:59.97:1207,60,0	0/0:16,0:16:42.14:0,42,697	1/1:3,14:18:36.12:799,36,0	1/1:6,13:20:51.08:1013,51,0	1/1:3,4:7:9.03:186,9,0	0/0:23,0:23:69.24:0,69,1146	0/0:10,0:10:24.08:0,24,397	0/0:15,0:15:39.01:0,39,582	1/1:1,14:15:39.04:801,39,0	0/0:19,0:19:51.16:0,51,808	0/0:28,0:28:84.25:0,84,1331	0/0:21,0:21:57.16:0,57,918	1/1:4,11:16:33.05:609,33,0	1/1:3,5:8:15.01:291,15,0	1/1:7,40:51:87.26:1924,87,0	0/0:9,0:9:24.07:0,24,374	0/0:7,0:7:18.06:0,18,286	0/0:22,0:22:63.16:0,63,993	1/1:5,11:17:36.11:771,36,0	1/1:3,12:16:39.11:782,39,0	1/1:3,9:13:30.07:618,30,0	1/1:1,3:4:9.03:204,9,0
chr10	55253509	.	AGT	A	13815.97	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=21.492;DP=674;FS=1.933;HRun=0;HaplotypeScore=148.2346;InbreedingCoeff=0.9999;MQ=90.08;MQ0=0;MQRankSum=-7.858;QD=37.85;ReadPosRankSum=0.617;VQSLOD=6.3822;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,135,2741	1/1:0,10:10:30.08:377,30,0	0/0:29,0:29:84.27:0,84,1645	0/0:27,0:27:81.28:0,81,1619	0/0:31,0:31:93.32:0,93,1889	1/1:0,32:32:96.28:1234,96,0	1/1:1,21:22:66.18:835,66,0	1/1:6,25:31:87.14:1040,87,0	1/1:1,18:19:54.16:709,54,0	1/1:3,26:29:81.24:1094,81,0	1/1:1,16:17:51.10:632,51,0	0/0:26,0:26:78.27:0,78,1572	0/0:25,0:25:75.26:0,75,1504	0/0:17,0:17:51.18:0,51,1036	1/1:2,27:29:87.24:1096,87,0	1/1:2,18:20:60.16:786,60,0	0/0:28,0:28:84.29:0,84,1687	0/0:20,0:20:60.16:0,60,1178	1/1:0,17:17:51.11:665,51,0	1/1:0,19:21:62.98:804,63,0	1/1:1,15:17:51.16:680,51,0	0/0:21,0:21:63.22:0,63,1269	0/0:20,0:20:60.21:0,60,1217	0/0:19,0:19:57.20:0,57,1157	1/1:1,17:18:51.11:663,51,0	1/1:0,27:27:81.23:1042,81,0	1/1:3,37:40:99:1552,120,0	1/1:3,13:16:48.12:606,48,0
chr10	55253510	.	GTAA	G	10997.41	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=21.910;DP=678;FS=1.214;HRun=0;HaplotypeScore=173.8236;InbreedingCoeff=0.9999;MQ=89.93;MQ0=0;MQRankSum=-8.055;QD=30.05;ReadPosRankSum=0.878;VQSLOD=5.1553;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,135,3327	1/1:10,0:10:29.96:293,30,0	0/0:29,0:29:81.28:0,81,1976	0/0:27,0:27:81.28:0,81,1855	0/0:31,0:31:93.32:0,93,2293	1/1:33,0:33:99:1017,99,0	1/1:22,0:22:61.59:614,62,0	1/1:25,6:31:93.01:942,93,0	1/1:19,0:19:49.05:517,49,0	1/1:26,3:29:87.09:919,87,0	1/1:17,0:17:50.99:520,51,0	0/0:27,0:27:81.23:0,81,1892	0/0:25,0:25:75.26:0,75,1838	0/0:17,0:17:51.18:0,51,1257	1/1:29,0:29:81.21:819,81,0	1/1:21,0:21:62.96:666,63,0	0/0:29,0:29:87.27:0,87,2040	0/0:21,0:21:63.22:0,63,1489	1/1:17,0:17:50.66:524,51,0	1/1:22,0:22:59.88:628,60,0	1/1:16,1:17:51.10:546,51,0	0/0:21,0:21:63.22:0,63,1552	0/0:20,0:20:60.21:0,60,1477	0/0:19,0:19:57.20:0,57,1402	1/1:18,0:18:50.79:537,51,0	1/1:27,0:27:73.61:762,74,0	1/1:40,1:41:99:1269,123,0	1/1:13,0:13:39.10:423,39,0
chr10	55253513	.	A	AG	14037.26	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=21.969;DP=705;FS=2.281;HRun=0;HaplotypeScore=143.8191;InbreedingCoeff=1.0000;MQ=89.06;MQ0=0;MQRankSum=-6.855;QD=35.90;ReadPosRankSum=-0.516;VQSLOD=4.2167;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,135,1887	1/1:4,10:14:36.08:426,36,0	0/0:29,0:29:81.27:0,81,1114	0/0:28,0:28:78.20:0,78,1025	0/0:31,0:31:93.31:0,93,1300	1/1:3,32:35:99:1313,105,0	1/1:5,21:26:75.14:876,75,0	1/1:9,25:34:99:1194,99,0	1/1:0,18:18:51.15:644,51,0	1/1:3,26:29:87.23:1114,87,0	1/1:1,16:17:51.14:629,51,0	0/0:26,0:26:78.21:0,78,1052	0/0:25,0:25:75.25:0,75,1049	0/0:18,0:18:51.17:0,51,713	1/1:1,27:28:84.20:1002,84,0	1/1:5,18:23:69.16:862,69,0	0/0:27,0:27:81.27:0,81,1131	0/0:21,0:21:63.21:0,63,874	1/1:1,17:18:53.99:673,54,0	1/1:4,19:23:63.10:784,63,0	1/1:3,15:18:51.16:661,51,0	0/0:22,0:22:66.21:0,66,909	0/0:20,0:20:60.20:0,60,837	0/0:21,0:21:63.16:0,63,826	1/1:2,17:19:53.95:668,54,0	1/1:3,25:28:81.09:987,81,0	1/1:8,37:45:99:1608,129,0	1/1:3,13:16:45.15:596,45,0
chr10	55255427	.	T	TG	11438.93	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=9.643;DP=693;FS=3.403;HRun=6;HaplotypeScore=95.5851;InbreedingCoeff=0.9949;MQ=81.12;MQ0=0;MQRankSum=-2.932;QD=31.77;ReadPosRankSum=0.725;VQSLOD=4.7690;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:96.19:0,96,970	1/1:1,6:7:12.01:150,12,0	0/0:20,0:20:42.04:0,42,409	0/0:22,0:21:40.89:0,41,463	0/0:19,0:19:48.09:0,48,483	1/1:1,17:18:45.14:566,45,0	1/1:4,31:35:75.20:922,75,0	1/1:5,25:30:66.18:802,66,0	1/1:1,24:25:75.24:940,75,0	1/1:4,22:26:63.20:791,63,0	1/1:0,18:18:48.15:604,48,0	0/0:37,0:37:99:0,102,1012	0/0:24,0:24:72.13:0,72,725	0/0:34,0:34:99:0,102,1022	1/1:2,22:24:60.19:751,60,0	1/1:1,21:22:66.21:823,66,0	0/0:32,0:32:87.17:0,87,878	0/0:27,0:27:78.14:0,78,785	1/1:1,8:9:27.05:323,27,0	1/1:0,14:14:33.11:415,33,0	1/1:4,44:48:99:1347,108,0	0/0:14,0:14:30.07:0,30,305	0/0:26,0:26:63.10:0,63,634	0/0:41,0:41:99:0,117,1182	1/1:1,16:17:48.15:604,48,0	1/1:1,30:31:90.28:1118,90,0	1/1:0,27:27:81.26:1019,81,0	1/1:0,9:9:21.07:264,21,0
chr10	55256132	.	TCACCACCTG	T	14843.62	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=16.785;DP=586;FS=1.540;HRun=0;HaplotypeScore=173.1796;InbreedingCoeff=0.9696;MQ=87.55;MQ0=0;MQRankSum=-16.863;QD=56.01;ReadPosRankSum=-0.762;VQSLOD=4.7604;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,108,4927	1/1:1,3:4:6.02:180,6,0	0/0:28,0:28:71.91:0,72,2759	0/0:23,0:23:60.21:0,60,2402	0/0:17,0:17:39.13:0,39,1860	1/1:4,11:15:27.09:776,27,0	1/1:5,16:21:27.09:755,27,0	1/1:3,22:25:66.21:1870,66,0	1/1:2,21:23:57.20:1660,57,0	1/1:3,14:17:39.13:1113,39,0	1/1:1,10:11:24.08:721,24,0	0/0:27,0:27:78.25:0,78,3604	0/0:16,0:16:45.14:0,45,1883	0/0:29,0:29:87.25:0,87,3702	1/1:1,29:30:72.25:2147,72,0	0/0:27,0:27:75.26:0,75,3462	0/0:34,0:34:93.32:0,93,4259	0/0:21,0:21:63.19:0,63,2759	1/1:5,19:24:57.18:1466,57,0	1/1:2,5:7:12.04:308,12,0	1/1:14,29:43:42.06:1192,42,0	0/0:21,0:21:60.16:0,60,2635	0/0:12,0:12:36.12:0,36,1707	0/0:28,0:28:81.26:0,81,3597	1/1:1,7:8:15.05:450,15,0	1/1:2,6:8:18.06:541,18,0	1/1:5,16:21:50.20:1394,50,0	1/1:1,7:8:9.03:271,9,0
chr10	55256526	.	TCAAAACAAAACAAAACAAAA	T	13861.51	PASS	AB=0.690;AC=29;AF=0.537;AN=54;BaseQRankSum=10.975;DP=633;FS=3.410;HRun=0;HaplotypeScore=336.9113;InbreedingCoeff=0.8341;MQ=65.34;MQ0=9;MQRankSum=-6.459;QD=47.96;ReadPosRankSum=3.756;VQSLOD=3.2346;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:30:48.16:0,48,3363	1/1:3,2:5:3.01:160,3,0	0/0:25,0:18:12.04:0,12,380	0/0:41,0:20:20.75:0,21,210	0/0:27,0:29:66.22:0,66,5235	1/1:10,5:15:12.04:638,12,0	1/1:9,5:14:9.03:396,9,0	./.	1/1:11,5:16:12.04:630,12,0	1/1:18,9:27:27.09:1295,27,0	1/1:10,3:13:6.02:114,6,0	0/0:19,0:25:39.13:0,39,2953	0/0:16,0:16:36.12:0,36,2660	0/0:28,0:28:48.16:0,48,4238	1/1:13,10:23:21.07:882,21,0	0/1:11,0:20:99:279,0,283	0/0:19,0:22:36.07:0,36,2188	0/0:25,0:25:41.93:0,42,2651	1/1:14,6:18:18.03:574,18,0	1/1:12,7:19:15.05:572,15,0	1/1:21,5:26:3.11:250,3,0	0/0:38,0:38:90.31:0,90,7711	0/0:14,0:24:58.43:0,58,4205	0/0:16,0:21:24.08:0,24,1504	1/1:14,10:24:24.08:1269,24,0	1/1:6,15:21:42.14:2167,42,0	1/1:8,24:32:69.24:3676,69,0	1/1:8,6:14:18.06:959,18,0
chr10	55256932	.	AGT	A	79.68	PASS	AB=0.645;AC=1;AF=0.018;AN=56;BaseQRankSum=6.139;DP=706;FS=8.092;HRun=0;HaplotypeScore=92.3918;InbreedingCoeff=-0.0186;MQ=64.75;MQ0=2;MQRankSum=-4.461;QD=3.98;ReadPosRankSum=1.499;VQSLOD=1.7651;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,150,2744	0/0:13,0:13:36.12:0,36,694	0/0:12,0:11:27.04:0,27,413	0/0:12,0:11:17.20:0,17,329	0/0:20,0:20:57.18:0,57,1055	0/0:18,0:18:54.19:0,54,1043	0/0:33,0:33:93.32:0,93,1797	0/0:29,0:29:84.29:0,84,1613	0/0:26,0:26:66.19:0,66,1175	0/0:20,0:20:60.20:0,60,1124	0/0:14,0:14:42.14:0,42,810	0/0:40,0:40:99:0,117,2260	0/0:19,0:19:57.20:0,57,1098	0/0:27,0:27:81.28:0,81,1565	0/0:31,0:31:87.30:0,87,1663	0/1:9,11:20:99:154,0,255	0/0:37,0:37:99:0,111,2099	0/0:18,0:18:54.19:0,54,1042	0/0:25,0:20:57.20:0,57,1101	0/0:10,0:10:30.10:0,30,559	0/0:71,0:71:99:0,214,4011	0/0:20,0:20:57.18:0,57,1068	0/0:16,0:16:45.15:0,45,858	0/0:41,0:41:99:0,123,2376	0/0:15,0:15:45.15:0,45,868	0/0:23,0:22:63.21:0,63,1180	0/0:34,0:34:99:0,102,1906	0/0:11,0:11:33.11:0,33,637
chr10	55256936	.	AGGCCTAGT	A	648.58	PASS	AB=0.645;AC=1;AF=0.018;AN=56;BaseQRankSum=6.060;DP=695;FS=13.477;HRun=0;HaplotypeScore=174.7371;InbreedingCoeff=-0.0183;MQ=65.51;MQ0=2;MQRankSum=-4.902;QD=32.43;ReadPosRankSum=1.596;VQSLOD=2.8405;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,138,4272	0/0:13,0:13:36.12:0,36,1351	0/0:11,0:10:30.06:0,30,448	0/0:12,0:11:23.90:0,24,448	0/0:18,0:18:54.18:0,54,2165	0/0:19,0:19:57.19:0,57,1912	0/0:32,0:32:96.33:0,96,3005	0/0:28,0:28:81.27:0,81,1774	0/0:21,0:21:57.15:0,57,2026	0/0:20,0:20:57.19:0,57,1874	0/0:14,0:14:42.14:0,42,1592	0/0:42,0:42:99:0,123,4302	0/0:20,0:20:57.19:0,57,1973	0/0:27,0:27:81.28:0,81,3169	0/0:29,0:29:87.30:0,87,2997	0/1:9,11:20:94.06:723,0,94	0/0:36,0:36:99:0,105,3744	0/0:18,0:18:51.17:0,51,1844	0/0:26,0:21:60.18:0,60,1733	0/0:10,0:10:30.10:0,30,946	0/0:70,0:70:99:0,205,6650	0/0:18,0:18:54.17:0,54,1961	0/0:16,0:16:42.14:0,42,1384	0/0:46,0:46:99:0,138,4704	0/0:16,0:16:45.15:0,45,1664	0/0:21,0:20:60.21:0,60,2307	0/0:33,0:33:96.33:0,96,3422	0/0:11,0:11:33.11:0,33,1402
chr10	55257123	.	C	CTCCCTGGG	780.67	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=0.235;DP=540;FS=7.652;HRun=0;HaplotypeScore=142.4387;InbreedingCoeff=0.7577;MQ=71.94;MQ0=0;MQRankSum=-3.887;QD=15.31;ReadPosRankSum=-2.213;VQSLOD=1.9719;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:66.20:0,66,1601	1/1:4,4:9:12.04:495,12,0	0/0:22,0:20:20.91:0,21,339	0/1:18,0:15:13.03:13,0,14	0/0:20,0:20:33.10:0,33,782	0/0:17,0:17:36.11:0,36,841	0/0:21,0:21:45.14:0,45,1079	1/1:23,0:22:12.04:391,12,0	0/0:20,0:20:36.12:0,36,913	0/0:22,0:22:42.14:0,42,1065	0/0:8,0:8:21.07:0,21,533	0/0:27,0:27:63.20:0,63,1513	0/0:14,0:14:26.87:0,27,564	0/0:13,0:13:24.08:0,24,607	0/0:15,0:15:39.13:0,39,962	0/0:10,0:10:24.08:0,24,598	0/0:41,0:41:84.27:0,84,1957	0/0:22,0:22:42.14:0,42,1023	0/0:27,0:27:39.11:0,39,889	0/0:14,0:14:36.12:0,36,913	0/0:20,0:20:36.10:0,36,805	0/0:18,0:18:21.07:0,21,533	0/0:13,0:13:30.07:0,30,649	0/0:13,0:13:30.09:0,30,663	0/0:16,0:16:42.14:0,42,1041	0/0:19,0:19:39.12:0,39,892	0/0:35,0:35:69.24:0,69,1738	0/0:7,0:7:18.06:0,18,454
chr10	55257248	.	T	TTGTG	476.30	PASS	AB=0.942;AC=24;AF=0.429;AN=56;BaseQRankSum=4.921;DP=585;FS=0.000;HRun=0;HaplotypeScore=135.7183;InbreedingCoeff=0.3682;MQ=61.31;MQ0=2;MQRankSum=-2.542;QD=1.76;ReadPosRankSum=-3.833;VQSLOD=1.3299;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:33.04:0,33,752	1/1:13,0:13:3.07:63,3,0	0/0:21,0:15:26.06:0,26,296	0/0:22,0:13:20.02:0,20,315	0/0:20,0:20:33.07:0,33,469	0/1:10,7:17:23.56:81,0,24	1/1:24,0:24:12.20:96,12,0	0/1:21,0:20:12.80:13,0,20	1/1:19,0:20:0.79:19,1,0	0/1:22,0:22:17.39:26,0,17	0/1:16,0:17:13.20:40,0,13	0/0:22,0:22:51.08:0,51,760	0/0:17,0:17:45.14:0,45,671	0/0:26,0:26:63.12:0,63,886	1/1:17,0:17:1.43:6,1,0	0/1:9,0:9:14.37:14,0,85	0/0:39,0:39:71.26:0,71,1103	0/0:24,0:24:33.84:0,34,766	1/1:19,0:19:6.39:45,6,0	1/1:11,0:12:3.46:24,3,0	1/1:23,0:22:14.82:109,15,0	0/0:18,0:18:45.14:0,45,684	0/0:20,0:20:45.11:0,45,679	0/0:33,0:33:57.11:0,57,777	0/1:17,0:17:31.41:31,0,68	1/1:27,0:27:10.08:75,10,0	0/0:20,0:19:1.85:0,2,23	1/1:11,0:11:2.26:12,2,0
chr10	55257262	.	GTA	G	3149.10	PASS	AB=1.000;AC=27;AF=0.482;AN=56;BaseQRankSum=-1.908;DP=570;FS=12.758;HRun=0;HaplotypeScore=85.7393;InbreedingCoeff=0.4886;MQ=55.02;MQ0=7;MQRankSum=-2.478;QD=10.13;ReadPosRankSum=-4.227;VQSLOD=0.9238;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:35:37.61:0,38,694	1/1:9,1:10:19.45:171,19,0	0/0:16,0:10:26.75:0,27,231	0/1:22,0:11:4.32:4,0,136	0/0:13,0:13:35.75:0,36,373	0/1:13,0:13:13.63:60,0,14	1/1:27,0:25:37.87:311,38,0	1/1:10,12:21:10.21:340,10,0	0/1:16,0:16:46.53:85,0,47	0/1:16,0:16:22.95:199,0,23	1/1:16,1:16:17.06:234,17,0	0/0:24,0:24:32.87:0,33,651	0/0:18,0:18:45.91:0,46,484	0/0:28,0:28:65.79:0,66,693	1/1:17,0:17:17.19:203,17,0	0/0:10,0:9:9:0,9,83	0/0:42,0:41:38.05:0,38,949	0/1:27,0:27:24.02:24,0,544	1/1:15,0:13:33.35:274,33,0	1/1:13,0:13:8.31:178,8,0	0/1:23,0:22:3.12:206,0,3	0/0:23,0:23:27.57:0,28,396	0/0:17,0:17:46.93:0,47,586	0/0:32,0:32:56.75:0,57,591	0/1:14,0:14:63.11:91,0,63	1/1:32,0:32:39.33:594,39,0	1/1:18,1:18:18.64:262,19,0	1/1:8,0:8:1.90:116,2,0
chr10	55257299	.	T	TGT	467.42	PASS	AB=1.000;AC=27;AF=0.500;AN=54;BaseQRankSum=4.431;DP=510;FS=0.000;HRun=0;HaplotypeScore=76.3655;InbreedingCoeff=0.3524;MQ=70.94;MQ0=6;MQRankSum=0.652;QD=1.68;ReadPosRankSum=-2.392;VQSLOD=0.7823;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:40,0:39:3.50:4,0,289	1/1:4,0:4:2.61:42,3,0	0/0:27,0:16:2.04:0,2,6	./.	0/0:11,0:11:12.03:0,12,132	0/1:5,0:5:16.02:20,0,16	1/1:29,0:27:11.99:134,12,0	1/1:27,0:27:4.64:12,5,0	1/1:15,0:15:3.01:44,3,0	0/1:14,0:14:12.99:22,0,13	0/1:14,0:13:8.33:65,0,8	0/0:23,0:23:32.37:0,32,322	0/0:16,0:16:14.92:0,15,160	0/0:13,0:13:18.01:0,18,181	1/1:7,1:13:3.47:26,3,0	1/1:9,0:8:3:26,3,0	0/0:34,0:33:62.39:0,62,604	0/0:26,0:26:33.59:0,34,317	0/1:13,0:13:0:0,0,0	1/1:15,0:15:6:68,6,0	1/1:28,0:28:4.55:57,5,0	0/1:16,0:16:0.64:1,0,99	0/0:15,0:15:24.05:0,24,257	0/0:24,0:24:6.91:0,7,207	0/1:13,0:13:28.07:28,0,52	1/1:14,0:14:8.47:73,8,0	0/0:17,0:17:6.77:0,7,30	1/1:9,0:9:2.80:13,3,0
chr10	55257480	.	G	GA	13547.68	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=17.144;DP=769;FS=2.306;HRun=1;HaplotypeScore=114.6976;InbreedingCoeff=0.9999;MQ=76.86;MQ0=4;MQRankSum=-2.269;QD=38.60;ReadPosRankSum=0.958;VQSLOD=4.6794;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,1:44:99:0,126,1700	0/0:14,0:14:42.13:0,42,565	0/0:38,0:33:79.24:0,79,981	0/0:50,1:31:80.18:0,80,964	0/0:32,0:32:96.15:0,96,1210	1/1:1,21:22:57.19:872,57,0	1/1:2,28:30:66.22:1010,66,0	1/1:2,29:30:84.19:1162,84,0	1/1:0,28:28:60.20:914,60,0	1/1:2,32:33:96.31:1434,96,0	1/1:0,16:16:42.11:616,42,0	0/0:25,0:25:75.18:0,75,983	0/0:32,0:32:96.32:0,96,1321	0/0:34,0:34:99:0,102,1369	1/1:1,28:29:78.26:1193,78,0	0/0:21,0:21:60.16:0,60,811	0/0:27,0:27:75.24:0,75,1031	0/0:20,0:20:57.19:0,57,796	1/1:0,18:18:51.15:730,51,0	1/1:0,21:21:48.09:735,48,0	1/1:0,26:26:69.23:1056,69,0	0/0:33,0:33:99:0,99,1330	0/0:19,0:19:57.18:0,57,771	0/0:28,0:28:84.24:0,84,1119	1/1:0,22:22:60.20:918,60,0	1/1:2,26:28:78.26:1165,78,0	1/1:0,31:30:84.29:1284,84,0	1/1:0,15:15:30.10:459,30,0
chr10	55259110	.	GCCTTAAA	G	9815.60	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=11.415;DP=453;FS=2.925;HRun=0;HaplotypeScore=121.0389;InbreedingCoeff=0.9355;MQ=65.13;MQ0=1;MQRankSum=-14.472;QD=45.87;ReadPosRankSum=1.309;VQSLOD=4.9552;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:69.22:0,69,2556	1/1:0,4:4:6.02:149,6,0	0/0:20,0:18:40.98:0,41,1285	0/0:17,0:16:38.15:0,38,1276	0/0:9,0:9:24.08:0,24,902	1/1:0,14:14:33.11:815,33,0	1/1:4,13:17:27.09:669,27,0	1/1:4,11:15:24.08:566,24,0	1/1:2,18:20:54.19:1338,54,0	1/1:2,17:19:45.15:1058,45,0	1/1:0,10:10:8.09:222,8,0	0/0:20,0:20:54.19:0,54,2062	0/0:24,0:24:72.25:0,72,2770	0/0:14,0:14:39.13:0,39,1511	1/1:1,16:17:33.11:814,33,0	1/1:1,15:16:42.14:1041,42,0	0/0:27,0:27:75.26:0,75,2808	0/0:17,0:17:51.13:0,51,1881	1/1:7,10:17:27.09:669,27,0	1/1:1,7:8:12:243,12,0	1/1:4,11:14:8.74:286,9,0	0/0:23,0:23:61.44:0,61,2125	0/0:7,0:7:18.06:0,18,674	0/0:35,0:35:89.77:0,90,3270	1/1:0,10:10:18.06:443,18,0	1/1:4,8:13:27.09:667,27,0	1/1:1,16:17:33.07:763,33,0	1/1:0,2:2:3.01:74,3,0
chr10	55259687	.	TA	T	3768.90	PASS	AB=1.000;AC=27;AF=0.482;AN=56;BaseQRankSum=7.869;DP=464;FS=0.000;HRun=9;HaplotypeScore=51.4348;InbreedingCoeff=0.9184;MQ=73.70;MQ0=9;MQRankSum=-1.084;QD=15.97;ReadPosRankSum=1.331;VQSLOD=3.4524;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:66.17:0,66,744	0/0:5,0:5:14.98:0,15,156	0/0:31,0:18:30.82:0,31,334	0/1:44,0:17:15.37:15,0,219	0/0:10,0:10:30.08:0,30,336	1/1:1,14:15:36.02:329,36,0	1/1:3,12:15:30.01:274,30,0	0/0:34,0:34:84.24:0,84,959	1/1:4,7:11:18:165,18,0	1/1:2,11:13:35.87:305,36,0	1/1:3,10:13:27.01:247,27,0	0/0:11,0:11:25.44:0,25,339	0/0:9,0:9:27.08:0,27,311	0/0:13,0:13:30.05:0,30,331	1/1:1,10:11:18.01:165,18,0	0/0:8,0:8:21.04:0,21,224	0/0:31,0:31:78.18:0,78,873	0/0:17,0:17:39.10:0,39,438	1/1:9,13:22:38.93:334,39,0	1/1:1,18:19:50.96:452,51,0	1/1:3,9:12:27.01:247,27,0	0/0:7,0:7:12.04:0,12,138	0/0:10,0:10:27.08:0,27,312	0/0:11,0:11:21.06:0,21,242	1/1:3,12:15:27.01:247,27,0	1/1:3,13:16:39.02:357,39,0	1/1:4,19:22:51.03:467,51,0	1/1:0,6:6:18.01:165,18,0
chr10	55259808	.	G	GA	4826.19	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=10.520;DP=428;FS=3.133;HRun=6;HaplotypeScore=65.0881;InbreedingCoeff=0.8945;MQ=71.06;MQ0=5;MQRankSum=0.418;QD=20.89;ReadPosRankSum=-0.556;VQSLOD=4.1267;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:48.08:0,48,479	0/0:8,0:8:21.04:0,21,211	0/0:42,0:13:0.99:0,1,128	0/1:28,0:11:4.81:5,0,17	0/0:17,0:17:39.09:0,39,397	1/1:2,6:8:22.29:225,22,0	1/1:4,8:12:23.49:264,23,0	1/1:10,22:31:70.87:745,71,0	1/1:1,7:8:21.06:233,21,0	1/1:2,9:11:27.06:287,27,0	1/1:5,17:22:33.73:383,34,0	0/0:4,0:4:12.03:0,12,122	0/0:9,0:9:24.05:0,24,244	0/0:9,0:9:23.63:0,24,216	1/1:0,8:8:18.04:195,18,0	0/0:6,0:6:9.68:0,10,23	0/0:33,0:33:90.17:0,90,903	0/0:25,0:25:66.03:0,66,634	1/1:5,7:12:28.02:300,28,0	1/1:2,12:14:30.94:341,31,0	1/1:3,9:12:18.05:198,18,0	0/0:4,0:4:12.03:0,12,122	0/0:13,0:13:33.03:0,33,317	0/0:10,0:10:27.04:0,27,267	1/1:3,17:20:37.65:393,38,0	1/1:2,15:17:46.47:501,46,0	1/1:3,13:16:43.59:452,44,0	1/1:0,9:9:27.07:304,27,0
chr10	55261569	.	TGG	T	439.72	PASS	AB=0.920;AC=5;AF=0.089;AN=56;BaseQRankSum=0.618;DP=395;FS=22.041;HRun=11;HaplotypeScore=60.3533;InbreedingCoeff=0.5422;MQ=82.02;MQ0=0;MQRankSum=2.101;QD=7.71;ReadPosRankSum=3.537;VQSLOD=-0.0342;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:27:40.57:0,41,491	0/0:3,0:3:6:0,6,53	0/1:21,1:23:15.04:15,0,295	0/0:10,0:10:11.95:0,12,116	0/0:15,0:15:17.71:0,18,212	0/0:8,0:17:18.01:0,18,162	0/0:20,0:27:31.78:0,32,308	1/1:5,9:16:11.37:229,11,0	0/0:9,0:9:17.95:0,18,155	0/0:7,0:9:6:0,6,55	0/0:8,0:9:13.23:0,13,103	0/0:15,0:16:32.56:0,33,399	0/0:15,0:16:36.04:0,36,455	0/0:15,1:16:7.10:0,7,413	0/0:11,0:11:30.01:0,30,272	1/1:4,14:18:29.79:319,30,0	0/0:23,1:25:30.20:0,30,715	0/0:18,0:18:38.02:0,38,420	0/0:9,0:9:20.92:0,21,168	0/0:6,0:6:6.01:0,6,65	0/0:14,0:14:16.23:0,16,130	0/0:9,0:9:11.62:0,12,126	0/0:6,0:12:9.02:0,9,119	0/0:8,0:15:11.61:0,12,93	0/0:11,0:11:17.93:0,18,159	0/0:4,0:10:17.96:0,18,150	0/0:8,0:19:14.99:0,15,128	0/0:4,0:4:3:0,3,26
chr10	55262203	.	G	GA	418.10	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-1.898;DP=658;FS=2.356;HRun=5;HaplotypeScore=86.6968;InbreedingCoeff=0.9848;MQ=71.70;MQ0=0;MQRankSum=-1.371;QD=27.87;ReadPosRankSum=1.001;VQSLOD=3.8072;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:93.19:0,93,980	1/1:1,14:15:39.13:513,39,0	0/0:13,0:13:21.04:0,21,217	0/0:12,0:12:26.97:0,27,265	0/0:26,0:26:69.17:0,69,741	0/0:33,0:33:93.23:0,93,1000	0/0:19,0:19:48.09:0,48,500	0/0:37,0:37:93.21:0,93,991	0/0:21,0:21:54.13:0,54,580	0/0:39,0:39:99:0,114,1220	0/0:21,0:21:54.13:0,54,580	0/0:31,0:31:90.23:0,90,967	0/0:32,0:32:96.22:0,96,1022	0/0:22,0:22:60.13:0,60,636	0/0:23,0:23:63.16:0,63,677	0/0:29,0:29:78.14:0,78,808	0/0:9,0:9:24.06:0,24,258	0/0:14,0:14:36.09:0,36,387	0/0:23,0:23:60.14:0,60,643	0/0:25,0:25:69.17:0,69,741	0/0:26,0:26:75.19:0,75,805	0/0:24,0:24:69.17:0,69,741	0/0:25,0:25:69.15:0,69,732	0/0:15,0:15:39.10:0,39,419	0/0:24,0:24:69.16:0,69,734	0/0:28,0:28:72.18:0,72,774	0/0:35,0:34:93.22:0,93,992	0/0:6,0:6:18.05:0,18,193
chr10	55262417	.	A	AAGG	14041.93	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-16.346;DP=742;FS=0.674;HRun=0;HaplotypeScore=90.7221;InbreedingCoeff=0.9949;MQ=70.59;MQ0=1;MQRankSum=-1.573;QD=40.35;ReadPosRankSum=-0.343;VQSLOD=5.4679;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:57.18:0,57,798	0/0:23,0:23:42.12:0,42,580	0/0:30,0:23:30.10:0,30,416	0/0:24,0:21:11.82:0,12,373	0/0:25,0:25:57.17:0,57,781	1/1:8,25:33:63.22:1281,63,0	1/1:10,14:24:36.08:674,36,0	0/0:24,0:23:26.21:0,26,352	1/1:7,23:31:54.19:1090,54,0	1/1:7,25:33:81.27:1582,81,0	1/1:4,17:21:45.15:891,45,0	0/0:43,0:43:99:0,102,1424	0/0:29,0:29:69.22:0,69,970	0/0:27,0:27:66.21:0,66,926	1/1:5,30:35:72.25:1464,72,0	0/0:29,1:30:23.27:0,23,1062	0/0:24,0:24:60.10:0,60,812	0/0:17,0:17:39.58:0,40,539	1/1:9,8:19:33.07:579,33,0	1/1:10,16:26:48.12:872,48,0	1/1:7,26:33:66.23:1342,66,0	0/0:24,0:25:60.20:0,60,852	0/0:29,0:29:69.21:0,69,953	0/0:15,0:15:36.12:0,36,515	1/1:2,22:24:54.08:1005,54,0	1/1:6,20:26:60.19:1139,60,0	1/1:2,25:28:66.23:1341,66,0	1/1:0,13:14:39.13:783,39,0
chr10	55262881	.	CTT	C	1776.46	PASS	AB=0.889;AC=26;AF=0.464;AN=56;BaseQRankSum=5.773;DP=537;FS=10.620;HRun=15;HaplotypeScore=79.1766;InbreedingCoeff=0.7320;MQ=56.91;MQ0=21;MQRankSum=1.712;QD=7.11;ReadPosRankSum=2.270;VQSLOD=-0.0351;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:43,3:47:58.19:0,58,861	0/0:7,0:10:7.96:0,8,37	0/0:23,0:7:6.87:0,7,52	0/0:16,0:8:11.83:0,12,58	0/0:16,0:16:30.30:0,30,310	1/1:10,13:29:11.37:273,11,0	1/1:7,8:15:17.10:187,17,0	0/0:20,1:25:11.64:0,12,207	1/1:2,9:12:11.82:150,12,0	1/1:16,6:21:20.72:183,21,0	1/1:7,11:19:11.44:135,11,0	0/0:19,0:18:33.50:0,34,336	0/0:12,1:16:0.14:0,0,216	0/0:15,0:14:8.99:0,9,75	1/1:11,8:21:14:146,14,0	0/0:5,0:9:12.97:0,13,58	0/0:42,0:44:85.97:0,86,935	0/0:19,0:21:46.68:0,47,425	0/1:20,6:24:23.43:139,0,23	1/1:6,6:11:17.11:139,17,0	1/1:2,6:7:14.68:116,15,0	0/0:7,0:8:21.01:0,21,243	0/0:12,0:13:17.86:0,18,152	0/1:19,0:17:12.69:13,0,206	1/1:11,9:21:14.72:174,15,0	1/1:11,7:17:17.69:155,18,0	1/1:6,10:17:8.68:123,9,0	1/1:0,5:5:6:53,6,0
chr10	55263074	.	C	CT	944.71	PASS	AB=0.833;AC=27;AF=0.482;AN=56;BaseQRankSum=-0.990;DP=280;FS=4.675;HRun=15;HaplotypeScore=58.9159;InbreedingCoeff=0.3256;MQ=70.68;MQ0=2;MQRankSum=-0.399;QD=5.43;ReadPosRankSum=-4.116;VQSLOD=1.1731;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:11,1:12:13.63:14,0,39	0/0:5,0:5:8.71:0,9,50	0/0:17,0:8:8.95:0,9,50	0/1:9,0:9:6.28:6,0,20	0/1:17,0:17:7.54:8,0,41	1/1:3,6:9:2.92:127,3,0	1/1:1,4:6:5.12:67,5,0	0/0:8,0:14:10.13:0,10,29	0/1:2,3:5:12.02:19,0,12	1/1:7,5:12:9.42:70,9,0	1/1:4,6:10:11.95:95,12,0	0/0:3,0:3:2.14:0,2,17	0/0:4,0:5:1.48:0,1,5	0/0:7,0:7:11.41:0,11,67	0/1:6,5:11:9.02:42,0,9	0/0:9,0:9:17.48:0,17,108	0/0:14,1:15:6.80:0,7,151	0/1:13,1:15:7.33:7,0,62	1/1:6,6:13:12.09:155,12,0	1/1:6,4:10:11.82:79,12,0	1/1:2,4:6:8.99:76,9,0	0/0:7,0:7:8.67:0,9,54	0/0:10,0:11:10.24:0,10,57	0/0:13,0:13:13.14:0,13,100	0/1:7,3:12:15.25:88,0,15	1/1:2,5:7:5.95:44,6,0	1/1:6,5:12:0.98:88,1,0	1/1:0,6:7:17.82:140,18,0
chr10	55264388	.	AGTTGC	A	912.55	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.572;DP=565;FS=0.858;HRun=0;HaplotypeScore=106.2691;InbreedingCoeff=0.9950;MQ=73.41;MQ0=1;MQRankSum=-7.418;QD=45.63;ReadPosRankSum=-1.112;VQSLOD=3.6194;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:54.16:0,54,1722	0/0:11,0:11:33.11:0,33,1069	0/0:18,0:18:54.19:0,54,1771	0/0:15,0:15:45.15:0,45,1405	0/0:35,0:35:99:0,105,3471	0/0:26,0:26:78.27:0,78,2589	0/0:12,0:12:36.12:0,36,1142	1/1:0,20:20:60.21:1007,60,0	0/0:19,0:19:57.20:0,57,1868	0/0:29,0:29:87.30:0,87,2898	0/0:21,0:21:63.20:0,63,2018	0/0:17,0:17:51.18:0,51,1698	0/0:21,0:21:63.20:0,63,2019	0/0:8,0:8:21.07:0,21,699	0/0:20,0:19:60.19:0,60,1925	0/0:16,0:16:48.14:0,48,1460	0/0:22,0:22:66.23:0,66,2109	0/0:15,0:15:45.15:0,45,1446	0/0:11,0:10:30.10:0,30,991	0/0:33,0:33:99:0,99,3225	0/0:31,0:31:93.31:0,93,3015	0/0:22,0:22:66.23:0,66,2175	0/0:20,0:20:60.21:0,60,1999	0/0:16,0:16:48.16:0,48,1599	0/0:27,0:27:81.28:0,81,2696	0/0:27,0:27:81.28:0,81,2700	0/0:21,0:21:63.22:0,63,2100	0/0:14,0:14:42.14:0,42,1399
chr10	55264394	.	AAACAG	A	888.58	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.578;DP=589;FS=0.855;HRun=0;HaplotypeScore=110.7769;InbreedingCoeff=0.9950;MQ=76.28;MQ0=1;MQRankSum=-7.500;QD=42.31;ReadPosRankSum=-0.817;VQSLOD=3.2544;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:54.19:0,54,1658	0/0:12,0:12:36.12:0,36,1200	0/0:24,0:23:69.21:0,69,2027	0/0:18,0:18:51.18:0,51,1638	0/0:36,0:36:99:0,105,3482	0/0:26,0:26:78.26:0,78,2461	0/0:11,0:11:33.11:0,33,1048	1/1:1,20:21:39.65:983,40,0	0/0:19,0:19:57.20:0,57,1894	0/0:31,0:31:93.31:0,93,2951	0/0:21,0:21:63.22:0,63,2097	0/0:17,0:17:51.18:0,51,1673	0/0:21,0:21:63.22:0,63,2056	0/0:7,0:7:21.07:0,21,698	0/0:19,0:18:57.20:0,57,1876	0/0:13,0:13:39.13:0,39,1300	0/0:21,0:21:60.21:0,60,1865	0/0:17,0:17:51.17:0,51,1578	0/0:11,0:10:30.10:0,30,998	0/0:34,0:34:99:0,102,3335	0/0:34,0:34:99:0,102,3389	0/0:22,0:22:66.23:0,66,2147	0/0:22,0:22:66.23:0,66,2170	0/0:18,0:18:54.19:0,54,1783	0/0:29,0:29:87.28:0,87,2659	0/0:29,0:29:87.30:0,87,2898	0/0:19,0:19:57.20:0,57,1849	0/0:19,0:19:57.20:0,57,1881
chr10	55265954	.	TG	T	372.63	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.214;DP=663;FS=1.089;HRun=1;HaplotypeScore=66.1238;InbreedingCoeff=0.9451;MQ=68.57;MQ0=0;MQRankSum=0.431;QD=31.05;ReadPosRankSum=2.368;VQSLOD=3.4290;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:81.23:0,81,1265	1/1:0,12:12:36.12:467,36,0	0/0:21,0:19:54.17:0,54,839	0/0:19,0:18:54.18:0,54,845	0/0:32,0:32:96.33:0,96,1535	0/0:29,0:27:78.24:0,78,1210	0/0:17,0:17:51.16:0,51,792	0/0:31,0:30:90.28:0,90,1417	0/0:16,0:16:48.16:0,48,767	0/0:28,0:28:81.28:0,81,1294	0/0:30,0:30:90.29:0,90,1411	0/0:27,0:27:81.25:0,81,1268	0/0:25,0:25:75.26:0,75,1199	0/0:21,0:21:63.20:0,63,985	0/0:29,0:29:87.27:0,87,1345	0/0:26,0:26:78.27:0,78,1247	0/0:18,0:18:54.18:0,54,858	0/0:4,0:4:9.03:0,9,144	0/0:20,0:20:60.19:0,60,936	0/0:37,0:37:99:0,108,1726	0/0:15,0:15:45.15:0,45,719	0/0:30,0:30:90.28:0,90,1408	0/0:21,0:21:63.21:0,63,1007	0/0:22,0:22:66.22:0,66,1050	0/0:19,0:19:57.17:0,57,884	0/0:39,0:39:99:0,117,1849	0/0:34,0:34:99:0,99,1553	0/0:14,0:14:42.14:0,42,671
chr10	55266399	.	G	GTTT	12851.38	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=15.069;DP=677;FS=0.954;HRun=6;HaplotypeScore=156.0420;InbreedingCoeff=0.9989;MQ=60.67;MQ0=5;MQRankSum=-12.497;QD=41.86;ReadPosRankSum=0.418;VQSLOD=3.0257;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,99,1355	0/0:11,0:11:23.69:0,24,266	0/0:25,0:20:37.51:0,38,571	0/0:29,0:21:49.86:0,50,618	0/0:26,0:26:72.20:0,72,980	1/1:10,8:17:45.58:829,46,0	1/1:12,8:20:49.91:752,50,0	0/0:31,0:31:61.15:0,61,622	1/1:11,7:21:56.28:910,56,0	1/1:20,9:30:74.71:1114,75,0	1/1:10,14:24:66.55:1152,67,0	0/0:24,0:24:63.19:0,63,860	0/0:26,0:26:78.25:0,78,1070	0/0:23,0:23:69.22:0,69,948	1/1:12,14:26:69.69:1314,70,0	0/0:25,0:25:66.18:0,66,898	0/0:21,0:21:57.14:0,57,768	0/0:15,0:15:36.11:0,36,509	1/1:28,6:33:77.83:1244,78,0	1/1:16,12:29:85.47:1387,85,0	1/1:11,3:13:23.50:278,24,0	0/0:19,0:19:57.17:0,57,782	0/0:15,0:15:36.09:0,36,488	0/0:43,0:43:89.04:0,89,1608	1/1:13,0:13:39.12:630,39,0	1/1:29,13:43:99:1763,119,0	1/1:12,12:26:63.56:1092,64,0	1/1:7,2:9:22.01:386,22,0
chr10	55266401	.	TTTTTG	T	618.84	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=0.541;DP=682;FS=7.700;HRun=0;HaplotypeScore=225.4445;InbreedingCoeff=0.8351;MQ=60.43;MQ0=5;MQRankSum=0.781;QD=11.05;ReadPosRankSum=-3.093;VQSLOD=1.5153;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:79.82:0,80,2119	1/1:3,0:11:11.20:114,11,0	0/0:24,0:19:16.29:0,16,388	0/0:30,0:22:24.06:0,24,425	0/0:26,0:26:66.22:0,66,1680	0/0:17,0:16:36.05:0,36,598	0/0:20,0:20:39:0,39,503	1/1:17,13:30:40:620,40,0	0/0:23,0:23:56.94:0,57,761	0/0:29,0:29:60.06:0,60,1029	0/0:24,0:24:63.04:0,63,1016	0/0:23,0:23:27.05:0,27,625	0/0:27,0:27:57.15:0,57,1304	0/0:23,0:23:45.14:0,45,1208	0/0:26,0:27:69.09:0,69,1111	0/0:25,0:25:66.23:0,66,1695	0/0:20,0:20:42.09:0,42,1029	0/1:15,0:15:1.41:1,0,692	0/0:38,0:37:86.45:0,86,998	0/0:29,0:29:59.92:0,60,963	0/0:14,0:13:23.98:0,24,276	0/0:21,0:21:51.17:0,51,1277	0/0:17,0:17:30.09:0,30,642	0/0:44,0:44:81.02:0,81,2142	0/0:13,0:13:28.90:0,29,180	0/0:42,0:42:95.92:0,96,1488	0/0:24,0:24:60.03:0,60,932	0/0:9,0:9:26.68:0,27,357
chr10	55266404	.	TTG	T	5285.47	PASS	AB=0.802;AC=16;AF=0.286;AN=56;BaseQRankSum=6.948;DP=676;FS=6.596;HRun=0;HaplotypeScore=168.8719;InbreedingCoeff=-0.1486;MQ=58.02;MQ0=5;MQRankSum=-2.551;QD=15.19;ReadPosRankSum=0.873;VQSLOD=4.3217;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:94.08:0,94,1617	0/1:11,0:11:18.93:19,0,172	0/0:26,0:20:38.03:0,38,648	0/0:29,0:20:52.87:0,53,722	0/0:27,0:27:75.25:0,75,1275	0/1:11,5:15:1.60:260,0,2	0/1:17,3:20:47.26:393,0,47	0/1:28,0:28:76.86:77,0,294	0/1:16,6:22:25.42:387,0,25	0/1:20,8:28:99:346,0,116	0/1:18,6:24:69.52:302,0,70	0/0:23,0:23:69.14:0,69,1006	0/0:27,0:27:81.26:0,81,1303	0/0:23,0:23:69.23:0,69,1126	0/1:22,6:28:48.37:332,0,48	0/0:25,0:25:75.24:0,75,1254	0/0:20,0:20:60.16:0,60,950	0/0:15,0:15:33.20:0,33,637	0/1:23,15:37:99:690,0,106	0/1:18,11:29:15.88:606,0,16	0/1:9,5:13:8.05:139,0,8	0/0:21,0:21:63.21:0,63,1045	0/0:15,0:15:45.07:0,45,673	0/0:43,0:43:99:0,127,1974	1/1:1,12:13:39.12:536,39,0	0/1:31,12:43:99:701,0,152	0/1:19,6:25:20.98:324,0,21	0/1:4,5:9:22.39:173,0,22
chr10	55266429	.	T	TTG	12524.06	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=11.718;DP=667;FS=13.683;HRun=0;HaplotypeScore=145.2931;InbreedingCoeff=0.9976;MQ=60.48;MQ0=5;MQRankSum=-11.103;QD=39.14;ReadPosRankSum=-0.014;VQSLOD=5.4256;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:32:71.35:0,71,1356	0/0:10,0:10:14.93:0,15,164	0/0:33,0:26:61.50:0,62,759	0/0:31,0:22:49.06:0,49,614	0/0:29,0:29:81.25:0,81,1186	1/1:0,13:18:42.14:693,42,0	1/1:4,12:17:40.31:614,40,0	0/0:27,0:26:51.12:0,51,619	1/1:2,21:29:57.14:963,57,0	1/1:3,19:30:87.20:1354,87,0	1/1:3,12:26:77.61:1204,78,0	0/0:14,0:14:39.12:0,39,576	0/0:22,0:22:66.20:0,66,968	0/0:17,0:17:51.17:0,51,780	1/1:3,19:32:84.23:1380,84,0	0/0:28,0:28:84.28:0,84,1265	0/0:17,0:17:51.17:0,51,780	0/0:18,0:18:51.16:0,51,738	1/1:9,20:34:53.58:1258,54,0	1/1:4,9:24:63.20:1008,63,0	1/1:5,11:16:30.08:452,30,0	0/0:18,0:18:54.15:0,54,783	0/0:17,0:17:48.15:0,48,713	0/0:34,0:34:96.33:0,96,1465	1/1:1,13:14:30.10:514,30,0	1/1:6,21:37:99:1672,105,0	1/1:3,17:28:53.95:907,54,0	1/1:3,7:12:33.06:506,33,0
chr10	55266740	.	A	AT	389.90	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-5.098;DP=517;FS=5.097;HRun=8;HaplotypeScore=48.9147;InbreedingCoeff=0.9865;MQ=80.93;MQ0=0;MQRankSum=0.030;QD=25.99;ReadPosRankSum=-0.083;VQSLOD=4.2342;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:75.04:0,75,686	1/1:0,15:15:42.12:485,42,0	0/0:16,0:15:20.13:0,20,199	0/0:16,0:16:21.80:0,22,199	0/0:29,0:30:83.06:0,83,743	0/0:21,0:21:57.03:0,57,522	0/0:9,0:9:24.01:0,24,220	0/0:22,0:22:56.99:0,57,515	0/0:14,0:14:30:0,30,275	0/0:17,0:17:42.02:0,42,382	0/0:26,0:26:66.03:0,66,604	0/0:16,0:16:33.01:0,33,302	0/0:19,0:19:51.02:0,51,467	0/0:12,0:12:36.02:0,36,329	0/0:19,0:19:48.01:0,48,435	0/0:11,0:11:26.99:0,27,241	0/0:19,0:19:54.03:0,54,494	0/0:17,0:17:48.02:0,48,439	0/0:21,0:21:54.02:0,54,494	0/0:21,0:21:54.01:0,54,489	0/0:14,0:14:39.02:0,39,357	0/0:22,0:22:60:0,60,540	0/0:23,0:23:63:0,63,570	0/0:12,0:12:27:0,27,247	0/0:16,0:16:45.01:0,45,407	0/0:29,0:29:78.01:0,78,705	0/0:23,0:23:66.04:0,66,604	0/0:12,0:12:36.02:0,36,329
chr10	55268672	.	GCA	G	587.78	PASS	AB=0.901;AC=19;AF=0.380;AN=50;BaseQRankSum=0.433;DP=464;FS=5.670;HRun=0;HaplotypeScore=65.6651;InbreedingCoeff=0.2156;MQ=72.14;MQ0=13;MQRankSum=0.182;QD=2.94;ReadPosRankSum=1.662;VQSLOD=0.7747;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:15:0.88:2,1,0	0/0:7,0:7:2.93:0,3,39	./.	./.	0/1:11,3:14:26.29:26,0,38	0/0:18,0:22:12.01:0,12,122	0/0:8,0:13:15.01:0,15,149	./.	1/1:6,4:10:6.01:65,6,0	0/0:20,0:24:17.91:0,18,168	0/0:13,0:17:6.01:0,6,70	1/1:7,3:12:11.86:111,12,0	0/1:14,2:16:17.29:17,0,137	0/0:8,0:8:8.65:0,9,132	0/1:7,1:9:20.24:20,0,79	0/0:15,0:25:18.48:0,18,172	0/1:19,3:24:43.25:101,0,43	0/1:11,2:13:22.90:23,0,33	0/1:11,0:10:10.75:11,0,55	0/0:10,0:14:6.01:0,6,69	0/0:12,0:11:3:0,3,26	1/1:14,2:17:8.85:79,9,0	1/1:18,8:27:20.89:207,21,0	1/1:10,2:13:11.53:74,12,0	0/0:10,0:9:9.01:0,9,98	0/0:14,0:15:16.22:0,16,132	0/1:15,0:17:13.67:14,0,165	0/0:4,0:4:5.98:0,6,46
chr10	55269484	.	CT	C	6464.12	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=6.813;DP=544;FS=1.110;HRun=6;HaplotypeScore=115.1184;InbreedingCoeff=0.9856;MQ=63.62;MQ0=2;MQRankSum=-0.425;QD=25.96;ReadPosRankSum=1.847;VQSLOD=4.1457;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:78.72:0,79,1025	0/0:8,0:8:21.06:0,21,263	0/0:20,1:16:10.84:0,11,446	0/0:14,1:13:27.08:0,27,337	0/0:29,0:29:66.20:0,66,851	1/1:1,14:15:33.08:354,33,0	1/1:0,13:13:36.09:387,36,0	0/0:23,0:23:57.18:0,57,748	1/1:2,20:22:63.16:673,63,0	1/1:4,22:26:63.15:673,63,0	1/1:0,13:13:33.07:354,33,0	0/0:16,0:16:39.13:0,39,506	0/0:17,0:17:42.10:0,42,521	0/0:14,0:14:36.12:0,36,471	1/1:4,22:26:66.13:697,66,0	0/0:20,0:20:54.07:0,54,670	0/0:33,0:33:81.24:0,81,1049	0/0:19,0:19:54.17:0,54,697	1/1:5,14:19:42.10:451,42,0	1/1:5,16:21:51.13:547,51,0	1/1:0,18:18:39.10:419,39,0	0/0:16,0:16:45.15:0,45,592	0/0:13,0:12:27.09:0,27,353	0/0:19,0:19:42.09:0,42,532	1/1:3,16:19:48.12:516,48,0	1/1:0,20:20:60.13:634,60,0	1/1:7,21:28:62.58:663,63,0	1/1:7,2:9:9.02:95,9,0
chr10	55269490	.	TA	T	1805.47	PASS	AB=1.000;AC=22;AF=0.393;AN=56;BaseQRankSum=8.499;DP=532;FS=4.550;HRun=1;HaplotypeScore=133.6536;InbreedingCoeff=0.7486;MQ=61.19;MQ0=16;MQRankSum=-0.540;QD=7.55;ReadPosRankSum=4.306;VQSLOD=1.2363;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:81.18:0,81,1177	0/0:7,0:7:20.99:0,21,290	0/0:25,0:16:10.77:0,11,543	0/0:17,0:11:27.09:0,27,411	0/0:24,0:24:69.05:0,69,952	0/1:16,0:15:1.51:107,0,2	1/1:14,0:14:13.36:96,13,0	0/0:23,0:23:69.09:0,69,955	1/1:20,2:22:55.16:297,55,0	1/1:26,0:26:30.58:129,31,0	0/1:15,0:15:13.16:93,0,13	0/0:18,0:18:44.91:0,45,567	0/0:14,0:15:39.12:0,39,554	0/0:14,0:13:21.16:0,21,525	1/1:23,1:23:41.81:256,42,0	0/0:21,0:21:59.79:0,60,753	0/0:32,0:32:84.20:0,84,1244	0/0:19,0:19:56.91:0,57,804	0/1:16,0:16:2.82:79,0,3	1/1:18,1:19:28.12:187,28,0	0/1:22,0:19:11.20:86,0,11	0/0:17,0:16:45.15:0,45,671	0/0:15,0:13:32.91:0,33,390	0/0:17,0:17:39.60:0,40,564	1/1:18,0:18:26.48:158,26,0	1/1:20,0:20:42.68:188,43,0	1/1:22,2:24:45.30:279,45,0	1/1:2,1:3:8.40:59,8,0
chr10	55269499	.	GGTGTGTGTGT	G	2488.44	PASS	AB=0.800;AC=29;AF=0.580;AN=50;BaseQRankSum=4.325;DP=500;FS=0.000;HRun=0;HaplotypeScore=192.0441;InbreedingCoeff=0.0388;MQ=55.27;MQ0=20;MQRankSum=-5.976;QD=7.36;ReadPosRankSum=0.217;VQSLOD=2.5347;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:27:2.99:33,3,0	1/1:4,0:4:3.01:64,3,0	./.	./.	1/1:14,6:21:3.63:14,4,0	1/1:8,2:14:12.01:172,12,0	1/1:8,1:12:12.02:177,12,0	0/0:19,0:18:9:0,9,100	0/1:15,1:20:21.18:166,0,21	0/1:23,0:25:32.05:76,0,32	1/1:8,1:14:3:29,3,0	1/1:9,7:16:9.03:268,9,0	0/0:14,0:15:27.08:0,27,1024	0/0:15,0:15:24.08:0,24,1135	0/1:13,3:21:89.44:190,0,89	0/0:12,0:19:16.41:0,16,142	1/1:23,6:30:15.05:427,15,0	0/1:15,5:21:99:339,0,106	0/1:13,1:15:31.19:125,0,31	0/1:13,2:18:37.70:39,0,38	0/0:23,0:21:2.97:0,3,20	./.	1/1:10,5:14:0.47:1,0,0	1/1:16,3:19:2.68:89,3,0	0/0:12,1:18:2.98:0,3,22	0/1:13,1:17:57.88:130,0,58	0/1:14,2:19:99:202,0,181	0/1:2,1:3:10.25:105,0,10
chr10	55269811	.	T	TC	16869.62	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=-17.299;DP=720;FS=1.571;HRun=0;HaplotypeScore=63.4521;InbreedingCoeff=0.9998;MQ=85.83;MQ0=0;MQRankSum=-3.829;QD=43.48;ReadPosRankSum=1.043;VQSLOD=5.3659;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:49:99:0,150,1989	1/1:0,12:12:27.09:420,27,0	0/0:24,0:24:72.21:0,72,945	0/0:24,0:24:69.15:0,69,880	0/0:27,0:27:81.22:0,81,1095	1/1:0,15:15:39.13:623,39,0	1/1:1,37:38:99:1572,99,0	1/1:1,38:39:99:1797,114,0	1/1:0,22:22:60.20:959,60,0	1/1:1,25:26:72.24:1151,72,0	1/1:0,18:18:54.18:860,54,0	0/0:34,0:34:99:0,99,1384	0/0:24,0:24:72.22:0,72,974	0/0:34,0:34:99:0,102,1412	1/1:0,25:25:54.18:863,54,0	1/1:0,26:26:72.25:1149,72,0	0/0:25,0:25:75.25:0,75,1047	0/0:27,0:27:72.20:0,72,985	1/1:0,21:21:63.21:1002,63,0	1/1:1,24:25:69.23:1091,69,0	1/1:0,31:31:84.29:1342,84,0	0/0:17,0:17:48.16:0,48,671	0/0:20,0:20:60.19:0,60,819	0/0:26,0:26:72.23:0,72,992	1/1:0,25:25:72.25:1149,72,0	1/1:0,19:19:54.17:841,54,0	1/1:1,30:32:90.31:1427,90,0	1/1:0,14:14:39.13:623,39,0
chr10	55270557	.	AGG	A	2097.92	PASS	AB=0.703;AC=22;AF=0.407;AN=54;BaseQRankSum=10.647;DP=252;FS=5.855;HRun=2;HaplotypeScore=66.5007;InbreedingCoeff=0.6747;MQ=66.63;MQ0=13;MQRankSum=-8.596;QD=19.61;ReadPosRankSum=4.453;VQSLOD=1.5722;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:33.11:0,33,475	0/0:3,0:3:5.86:0,6,83	0/0:27,0:18:41.52:0,42,657	0/0:18,0:11:33:0,33,408	0/0:11,0:11:30.08:0,30,413	1/1:2,7:11:23.95:345,24,0	1/1:6,6:12:17.85:230,18,0	0/0:4,0:4:12.03:0,12,152	1/1:3,10:16:17.90:395,18,0	0/1:2,4:7:12.84:176,0,13	./.	0/0:8,0:8:24.08:0,24,354	0/0:9,0:9:26.99:0,27,390	0/0:13,0:13:39.10:0,39,560	1/1:3,3:9:14.99:211,15,0	0/0:6,0:8:16.61:0,17,213	0/0:5,0:6:18.06:0,18,253	0/0:2,0:2:6.02:0,6,84	0/1:7,3:7:61.89:109,0,62	1/1:0,5:5:3.01:44,3,0	1/1:8,2:8:3.46:25,3,0	0/0:7,0:6:18.06:0,18,269	0/0:5,0:5:15.04:0,15,189	0/0:11,0:11:30.10:0,30,438	1/1:2,2:4:6.01:68,6,0	1/1:2,5:7:1.44:221,1,0	1/1:2,10:12:30.10:422,30,0	1/1:0,1:1:3.01:43,3,0
chr10	55270570	.	G	GAT	2294	PASS	AB=0.975;AC=15;AF=0.288;AN=52;BaseQRankSum=10.002;DP=216;FS=10.233;HRun=0;HaplotypeScore=61.6302;InbreedingCoeff=0.1805;MQ=50.12;MQ0=15;MQRankSum=-8.843;QD=24.40;ReadPosRankSum=4.309;VQSLOD=3.9241;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:27.09:0,27,428	0/0:1,0:1:2.97:0,3,20	0/0:17,0:8:16.80:0,17,172	0/0:11,0:5:12.04:0,12,177	0/0:8,0:8:15.05:0,15,238	1/1:9,1:10:16.11:362,16,0	0/1:16,0:14:99:172,0,105	./.	0/1:13,1:14:95.55:448,0,96	0/1:8,0:8:75.83:248,0,76	./.	0/0:8,0:7:21.06:0,21,318	0/0:7,0:7:21.07:0,21,327	0/0:10,0:10:27.94:0,28,386	0/1:7,1:7:62.64:193,0,63	0/0:8,0:8:15.04:0,15,221	0/0:6,0:6:17.93:0,18,229	0/0:2,0:2:3:0,3,28	0/1:10,0:8:56.25:150,0,56	1/1:5,0:5:3.01:53,3,0	0/0:9,1:7:2.94:0,3,18	0/0:6,0:5:12.02:0,12,170	0/0:5,0:5:15.04:0,15,220	0/0:10,0:10:30.10:0,30,473	0/1:5,0:4:39.95:46,0,40	0/1:6,0:6:22.98:253,0,23	1/1:11,0:11:27.09:473,27,0	1/1:1,0:1:3.01:54,3,0
chr10	55270575	.	TG	T	1160.96	PASS	AB=0.710;AC=15;AF=0.268;AN=56;BaseQRankSum=9.641;DP=219;FS=12.059;HRun=2;HaplotypeScore=60.3430;InbreedingCoeff=0.1602;MQ=48.11;MQ0=17;MQRankSum=-7.929;QD=12.22;ReadPosRankSum=2.041;VQSLOD=0.9197;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:30.09:0,30,397	0/0:1,0:1:3.01:0,3,38	0/0:14,0:3:5.23:0,5,48	0/0:13,0:4:6.02:0,6,75	0/0:8,0:8:15.03:0,15,182	1/1:4,6:10:17.63:181,18,0	0/1:15,1:14:99:149,0,99	0/0:3,0:1:3.01:0,3,41	0/1:5,9:14:91.98:213,0,92	0/1:4,4:8:88.65:102,0,89	0/0:1,1:2:3.01:0,3,41	0/0:8,0:7:18.06:0,18,249	0/0:8,0:8:24.08:0,24,336	0/0:9,0:9:24.07:0,24,323	0/1:5,3:7:63.86:85,0,64	0/0:8,0:8:16.87:0,17,208	0/0:5,0:5:15.04:0,15,191	0/0:1,0:1:3.01:0,3,40	0/1:7,3:8:29.12:81,0,29	1/1:0,5:5:3.01:32,3,0	0/0:11,2:10:8.99:0,9,77	0/0:5,0:4:12.04:0,12,168	0/0:5,0:5:15.05:0,15,203	0/0:10,0:10:30.09:0,30,401	0/1:3,2:4:26.08:26,0,35	0/1:1,5:6:18.66:141,0,19	1/1:2,10:12:28.30:281,28,0	1/1:1,0:1:3.01:32,3,0
chr10	55270856	.	G	GC	14578.98	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=-15.693;DP=609;FS=2.555;HRun=0;HaplotypeScore=55.1802;InbreedingCoeff=0.9778;MQ=88.35;MQ0=0;MQRankSum=-4.300;QD=44.31;ReadPosRankSum=0.077;VQSLOD=5.1165;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,141,1956	1/1:0,2:2:6.02:96,6,0	0/0:22,0:22:59.20:0,59,795	0/0:24,0:24:60.14:0,60,786	0/0:10,0:10:30.06:0,30,397	1/1:0,15:15:45.15:719,45,0	1/1:1,29:30:84.29:1342,84,0	1/1:2,25:27:69.22:1073,69,0	1/1:1,34:35:96.33:1534,96,0	1/1:2,14:16:42.14:660,42,0	1/1:0,4:4:12.04:192,12,0	0/0:18,0:18:51.17:0,51,713	0/0:25,0:25:72.24:0,72,1005	0/0:28,0:28:84.27:0,84,1156	1/1:0,27:27:81.28:1295,81,0	1/1:0,29:29:78.27:1247,78,0	0/0:31,0:31:93.31:0,93,1300	0/0:22,0:22:63.13:0,63,822	1/1:0,23:23:69.24:1102,69,0	1/1:0,10:10:27.09:432,27,0	1/1:0,44:44:99:1965,123,0	0/0:9,0:9:15.05:0,15,210	0/0:10,0:10:21.07:0,21,292	0/0:32,0:32:90.30:0,90,1258	1/1:0,9:8:27.09:431,27,0	1/1:0,26:27:78.27:1247,78,0	1/1:2,20:22:54.18:862,54,0	1/1:0,9:9:24.08:383,24,0
chr10	55271443	.	TA	T	6117.77	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=10.112;DP=662;FS=42.975;HRun=9;HaplotypeScore=75.6046;InbreedingCoeff=0.9982;MQ=76.43;MQ0=1;MQRankSum=-2.141;QD=21.10;ReadPosRankSum=1.655;VQSLOD=2.5885;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,102,1273	0/0:8,0:8:24.07:0,24,277	0/0:35,0:33:44.96:0,45,594	0/0:38,1:29:17.20:0,17,409	0/0:27,0:27:69.18:0,69,775	1/1:5,12:17:33.01:302,33,0	1/1:4,21:25:45.02:412,45,0	0/0:19,0:19:48.11:0,48,526	1/1:1,23:24:48.03:439,48,0	1/1:1,26:27:78.01:704,78,0	1/1:4,13:17:33.01:302,33,0	0/0:30,0:30:87.25:0,87,995	0/0:19,0:19:57.13:0,57,641	0/0:14,0:14:42.09:0,42,471	1/1:1,30:31:66.04:604,66,0	0/0:22,0:22:54.08:0,54,596	0/0:26,0:26:72.21:0,72,830	0/0:29,1:29:59.78:0,60,930	1/1:2,17:19:51.01:463,51,0	1/1:5,17:22:47.94:429,48,0	1/1:2,26:28:78.04:714,78,0	0/0:17,0:17:42.12:0,42,476	0/0:15,0:15:30.09:0,30,346	0/0:30,0:30:75.22:0,75,866	1/1:5,15:20:36:329,36,0	1/1:2,25:27:75.03:680,75,0	1/1:2,20:22:48.02:439,48,0	1/1:0,11:11:33.02:302,33,0
chr10	55273811	.	A	ATGTTTCAACAGAAC	21414.94	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-10.974;DP=433;FS=16.284;HRun=0;HaplotypeScore=135.3568;InbreedingCoeff=0.9519;MQ=84.70;MQ0=0;MQRankSum=-11.887;QD=103.96;ReadPosRankSum=-0.525;VQSLOD=3.4035;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:93.41:0,93,3937	0/0:7,0:7:21.07:0,21,868	0/0:22,0:22:60.15:0,60,1910	0/0:16,0:16:39.03:0,39,1007	0/0:20,0:20:57.17:0,57,2041	1/1:0,5:9:15.05:1079,15,0	1/1:0,10:12:24.08:1714,24,0	1/1:6,0:20:57.19:1684,57,0	1/1:0,4:8:15.05:911,15,0	1/1:0,7:13:25.01:1604,25,0	1/1:0,14:20:30.10:2156,30,0	0/0:10,0:10:30.06:0,30,951	0/0:13,0:13:36.09:0,36,1245	0/0:17,0:17:51.16:0,51,2149	1/1:0,2:8:9.03:582,9,0	1/1:1,1:4:12.04:363,12,0	0/0:21,0:21:63.17:0,63,2227	0/0:21,0:21:63.17:0,63,2377	1/1:1,5:18:51.08:1993,51,0	1/1:0,11:19:39.13:2259,39,0	1/1:0,2:9:3.01:141,3,0	0/0:18,0:18:54.18:0,54,2166	0/0:19,0:19:57.14:0,57,2161	0/0:9,0:9:27.06:0,27,886	1/1:0,7:13:12.04:863,12,0	1/1:0,11:18:47.82:2712,48,0	1/1:0,11:22:36.12:2275,36,0	1/1:0,5:12:15.05:1078,15,0
chr10	55273869	.	GATTTATTTT	G	178.14	PASS	AC=2;AF=0.037;AN=54;BaseQRankSum=2.308;DP=406;FS=0.000;HRun=0;HaplotypeScore=106.5610;InbreedingCoeff=0.4991;MQ=39.82;MQ0=59;MQRankSum=-2.148;QD=25.45;ReadPosRankSum=1.172;VQSLOD=2.9201;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:36:84.25:0,84,3319	0/0:11,0:11:24.01:0,24,819	./.	0/0:3,0:1:2.98:0,3,22	0/0:27,0:26:66.23:0,66,2810	0/0:11,0:7:6.02:0,6,281	0/0:8,0:7:18.05:0,18,630	0/0:29,0:19:45.03:0,45,1408	0/0:18,0:13:33.08:0,33,1065	0/0:16,0:15:36.12:0,36,1488	0/0:7,0:5:9.03:0,9,320	0/0:11,0:11:27.09:0,27,1167	0/0:12,0:11:30.10:0,30,1141	0/0:14,0:14:24.07:0,24,866	0/0:9,0:7:9.03:0,9,298	1/1:1,6:6:9.03:261,9,0	0/0:27,0:23:60.14:0,60,2425	0/0:18,0:14:36.03:0,36,1160	0/0:17,0:12:27.09:0,27,1066	0/0:14,0:11:24.04:0,24,739	0/0:4,0:2:3.01:0,3,141	0/0:10,0:10:21.07:0,21,835	0/0:18,0:15:27.09:0,27,1221	0/0:16,0:15:39.13:0,39,1542	0/0:18,0:13:24.08:0,24,689	0/0:18,0:14:36.03:0,36,910	0/0:15,0:15:30.10:0,30,1018	0/0:7,0:3:3.01:0,3,140
chr10	55274463	.	CCTCTCTCTCT	C	2162.42	PASS	AB=0.900;AC=32;AF=0.667;AN=48;BaseQRankSum=-0.439;DP=533;FS=20.139;HRun=0;HaplotypeScore=149.8114;InbreedingCoeff=0.3940;MQ=70.38;MQ0=26;MQRankSum=2.507;QD=7.28;ReadPosRankSum=1.629;VQSLOD=1.1815;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:32,0:33:2.52:49,3,0	./.	0/0:26,0:17:2.84:0,3,14	./.	1/1:13,0:14:3.01:52,3,0	0/1:18,0:24:71.62:76,0,72	1/1:19,3:22:0.70:2,1,0	0/0:34,0:34:8.99:0,9,121	1/1:17,0:16:12.02:236,12,0	1/1:14,0:16:12.03:257,12,0	1/1:6,0:4:6:51,6,0	0/0:8,9:19:0.89:0,1,2	0/1:13,0:12:11.68:56,0,12	0/0:15,0:14:18.04:0,18,399	1/1:18,0:17:18.53:514,19,0	0/0:24,0:24:29.50:0,30,1064	1/1:14,0:15:8.99:183,9,0	1/1:10,0:9:6.02:138,6,0	1/1:20,0:23:6.87:242,7,0	1/1:20,0:22:2.99:24,3,0	0/0:19,10:27:0.47:0,0,1	1/1:11,1:19:3:25,3,0	1/1:12,0:12:6.02:177,6,0	0/0:15,9:19:3.01:0,3,46	./.	1/1:18,0:18:5.22:176,5,0	./.	1/1:7,0:7:3.01:48,3,0
chr10	55274511	.	TCACACACA	T	1491.84	PASS	AB=0.892;AC=13;AF=0.271;AN=48;BaseQRankSum=1.250;DP=570;FS=2.960;HRun=0;HaplotypeScore=168.6812;InbreedingCoeff=0.5420;MQ=40.36;MQ0=52;MQRankSum=-0.116;QD=7.73;ReadPosRankSum=0.322;VQSLOD=2.6508;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:39,0:35:14.91:363,15,0	1/1:2,7:8:3.43:158,3,0	./.	./.	./.	0/0:22,0:18:11.99:0,12,304	0/0:33,0:28:11.16:0,11,312	0/0:22,0:28:17.78:0,18,122	0/0:20,0:18:19.50:0,19,614	0/0:17,0:15:22.58:0,23,378	./.	0/1:27,0:28:6.71:187,0,7	0/0:15,0:14:20.59:0,21,376	0/1:18,0:18:54.66:55,0,448	0/0:27,0:26:26.65:0,27,800	1/1:13,0:29:27.09:504,27,0	0/1:15,0:20:1.31:229,0,1	0/0:9,0:7:2.78:0,3,21	0/0:8,0:7:8.82:0,9,124	0/0:16,0:15:2.56:0,3,71	0/0:37,0:30:13.62:0,14,481	1/1:23,0:20:6.01:129,6,0	1/1:6,0:18:2.70:18,3,0	0/0:25,0:19:0:0,0,0	0/0:23,0:22:18.06:0,18,580	0/0:25,0:24:40.28:0,40,810	0/0:21,0:18:27.52:0,28,693	0/0:11,0:10:26.96:0,27,661
chr10	55274551	.	A	ACG	5706.93	PASS	AB=0.782;AC=28;AF=0.500;AN=56;BaseQRankSum=-5.252;DP=713;FS=2.949;HRun=0;HaplotypeScore=139.3299;InbreedingCoeff=0.8590;MQ=51.76;MQ0=34;MQRankSum=1.641;QD=13.62;ReadPosRankSum=0.867;VQSLOD=4.8644;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:31:26.65:0,27,202	0/0:11,0:11:17.91:0,18,143	0/0:33,0:18:44.02:0,44,422	0/0:28,0:13:16.57:0,17,230	0/0:31,0:26:32.84:0,33,259	1/1:22,0:18:31.68:307,32,0	1/1:29,0:25:29.10:285,29,0	0/1:36,0:35:6.53:406,0,7	1/1:26,0:25:45.84:512,46,0	1/1:27,0:26:59.05:530,59,0	1/1:18,4:21:23.91:188,24,0	0/0:23,0:23:38.48:0,38,289	0/0:11,0:11:18.51:0,19,215	0/0:20,0:20:39.01:0,39,416	1/1:28,0:27:41.60:519,42,0	1/1:36,0:36:33.56:299,34,0	0/0:21,0:19:25.60:0,26,175	0/0:10,0:8:17.12:0,17,118	1/1:16,0:15:28.26:233,28,0	1/1:17,11:29:35.69:290,36,0	1/1:41,0:37:57.63:470,58,0	0/0:23,0:20:29.92:0,30,240	0/0:20,0:20:11.90:0,12,91	0/0:28,0:25:29.80:0,30,235	1/1:26,0:25:33.71:357,34,0	0/1:8,22:34:24.69:425,0,25	1/1:28,0:27:43.66:515,44,0	1/1:17,0:16:19.34:373,19,0
chr10	55274957	.	C	CAT	6620.27	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-14.620;DP=760;FS=4.854;HRun=0;HaplotypeScore=97.4542;InbreedingCoeff=0.9995;MQ=65.64;MQ0=2;MQRankSum=-1.946;QD=33.61;ReadPosRankSum=3.767;VQSLOD=7.3096;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,18:25:45.15:759,45,0	0/0:16,0:16:39.10:0,39,484	0/0:30,0:30:50.95:0,51,587	0/0:25,0:23:35.52:0,36,384	1/1:3,28:30:51.50:1095,52,0	0/0:34,0:34:84.25:0,84,1065	0/0:22,0:22:63.15:0,63,755	0/0:41,0:41:99:0,99,1219	0/0:35,0:35:90.25:0,90,1113	0/0:25,0:25:63.18:0,63,775	0/0:28,0:28:75.21:0,75,935	1/1:7,24:31:57.19:956,57,0	0/0:30,0:30:57.13:0,57,689	0/0:25,0:25:66.21:0,66,847	0/0:27,0:27:81.22:0,81,999	0/0:26,0:26:75.23:0,75,945	1/1:2,13:15:33.01:522,33,0	1/1:2,20:22:49.98:813,50,0	0/0:14,0:14:39.10:0,39,473	0/0:35,0:35:99:0,99,1227	0/0:41,0:41:99:0,107,1295	1/1:2,32:35:78.26:1314,78,0	1/1:1,23:23:44.85:758,45,0	1/1:4,10:14:24.08:404,24,0	0/0:23,0:23:57.15:0,57,703	0/0:37,0:37:99:0,102,1239	0/0:37,0:36:99:0,105,1308	0/0:12,0:12:36.07:0,36,431
chr10	55278563	.	T	TC	15693.90	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-17.261;DP=750;FS=1.537;HRun=2;HaplotypeScore=70.4793;InbreedingCoeff=0.9993;MQ=86.22;MQ0=0;MQRankSum=-2.770;QD=38.85;ReadPosRankSum=2.246;VQSLOD=5.5053;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,114,1410	0/0:15,0:15:39.07:0,39,462	0/0:25,0:25:69.20:0,69,806	0/0:22,0:23:51.12:0,51,605	0/0:30,0:30:84.26:0,84,1039	1/1:0,16:16:42.14:605,42,0	1/1:6,37:42:99:1492,105,0	1/1:2,26:28:78.23:1083,78,0	1/1:0,30:30:81.27:1164,81,0	1/1:0,30:30:90.24:1252,90,0	1/1:0,10:10:27.09:387,27,0	0/0:37,0:37:99:0,105,1288	0/0:27,0:27:69.21:0,69,849	0/0:26,0:26:72.20:0,72,866	1/1:1,37:38:99:1597,111,0	1/1:0,23:23:66.22:950,66,0	0/0:29,0:29:87.26:0,87,1062	0/0:25,0:25:75.20:0,75,908	1/1:1,23:24:69.11:922,69,0	1/1:1,19:20:57.19:820,57,0	1/1:3,55:58:99:2029,141,0	0/0:27,0:27:72.21:0,72,876	0/0:14,0:14:33.10:0,33,409	0/0:29,0:29:84.26:0,84,1041	1/1:0,26:26:72.24:1037,72,0	1/1:0,23:23:69.22:976,69,0	1/1:0,27:26:75.25:1078,75,0	1/1:1,7:8:21.07:302,21,0
chr10	55278882	.	T	TA	265.94	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=0.091;DP=611;FS=9.017;HRun=6;HaplotypeScore=124.0390;InbreedingCoeff=0.9885;MQ=80.23;MQ0=6;MQRankSum=-1.936;QD=20.46;ReadPosRankSum=1.179;VQSLOD=2.2179;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:93.19:0,93,947	1/1:4,9:13:30.06:360,30,0	0/0:24,0:24:57.26:0,57,536	0/0:33,0:29:56.42:0,56,582	0/0:34,0:34:66.11:0,66,664	0/0:19,0:19:51.11:0,51,515	0/0:29,0:27:54.08:0,54,541	0/0:25,0:25:57.12:0,57,577	0/0:21,0:21:48.09:0,48,480	0/0:20,0:19:42.09:0,42,433	0/0:11,0:11:24.05:0,24,245	0/0:19,0:19:42.09:0,42,427	0/0:17,0:17:45.07:0,45,450	0/0:18,0:18:42.09:0,42,427	0/0:24,0:24:57.12:0,57,582	0/0:16,0:16:36.03:0,36,357	0/0:29,0:28:66.13:0,66,674	0/0:19,0:18:33.06:0,33,336	0/0:13,0:14:32.10:0,32,312	0/0:23,0:23:57.13:0,57,591	0/0:24,0:23:57.13:0,57,581	0/0:22,0:22:42.09:0,42,429	0/0:19,0:19:36.08:0,36,367	0/0:19,0:17:39.08:0,39,394	0/0:31,0:31:75.14:0,75,757	0/0:19,0:18:48.10:0,48,490	0/0:23,0:23:48.04:0,48,463	0/0:6,0:6:18.04:0,18,183
chr10	55278898	.	C	CAA	5724.99	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=3.726;DP=617;FS=19.440;HRun=9;HaplotypeScore=135.4424;InbreedingCoeff=0.9964;MQ=69.20;MQ0=7;MQRankSum=-10.191;QD=25.90;ReadPosRankSum=0.285;VQSLOD=2.9702;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:33,8:40:99:1067,100,0	0/0:10,0:10:27.06:0,27,286	0/0:28,0:23:46.09:0,46,529	0/0:30,0:23:29.86:0,30,395	1/1:20,10:33:88.25:992,88,0	0/0:18,0:19:39.03:0,39,458	0/0:27,0:25:42.07:0,42,447	0/0:23,0:24:32.99:0,33,498	0/0:20,0:21:47.83:0,48,481	0/0:24,0:23:51.08:0,51,541	0/0:11,0:11:21.03:0,21,223	1/1:15,3:18:31.81:300,32,0	0/0:14,0:14:35.81:0,36,363	0/0:23,0:23:48.05:0,48,510	0/0:22,0:22:48.08:0,48,503	1/1:6,12:19:54.17:787,54,0	1/1:23,7:30:68.30:806,68,0	1/1:13,5:18:17.53:449,18,0	0/0:16,0:16:30.06:0,30,319	0/0:25,0:26:63.07:0,63,734	0/0:22,0:21:45.10:0,45,476	1/1:17,8:25:59.43:592,59,0	1/1:9,6:17:33.49:375,33,0	1/1:14,4:16:21.14:357,21,0	0/0:31,0:32:71.89:0,72,746	0/0:18,0:17:39.07:0,39,421	0/0:19,0:20:29.86:0,30,366	0/0:8,0:8:24:0,24,234
chr10	55278903	.	AAAAAC	A	4907.43	PASS	AB=0.911;AC=16;AF=0.286;AN=56;BaseQRankSum=5.780;DP=648;FS=8.408;HRun=0;HaplotypeScore=180.0332;InbreedingCoeff=0.7490;MQ=65.30;MQ0=7;MQRankSum=-9.639;QD=19.87;ReadPosRankSum=1.296;VQSLOD=3.8767;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:34,16:49:96.11:1041,96,0	0/0:10,0:10:1.32:0,1,211	0/0:27,0:22:53.75:0,54,1025	0/0:28,0:21:42.81:0,43,923	1/1:24,13:37:96.99:953,97,0	0/0:19,0:19:51.10:0,51,1254	0/0:26,0:24:48.15:0,48,1210	0/0:28,0:27:35.24:0,35,876	0/0:23,0:23:60.20:0,60,1420	0/0:25,0:24:69.15:0,69,1434	0/0:10,0:10:24.08:0,24,643	1/1:12,7:19:8.90:364,9,0	0/0:15,0:15:45.11:0,45,1119	0/0:24,0:24:72.23:0,72,1753	0/0:20,0:20:54.17:0,54,1229	0/1:19,0:19:99:128,0,590	1/1:29,7:35:11.75:618,12,0	0/1:18,5:22:16.19:404,0,16	0/0:18,0:18:37.97:0,38,755	0/0:26,0:26:38.27:0,38,1777	0/0:22,0:21:54.16:0,54,1202	1/1:15,12:27:13.40:734,13,0	1/1:10,5:15:36.75:433,37,0	1/1:18,3:19:5.04:232,5,0	0/0:33,0:33:87.29:0,87,2145	0/0:18,0:17:45.15:0,45,1135	0/0:21,0:21:54.03:0,54,1193	0/0:8,0:8:24.08:0,24,686
chr10	55278904	.	AAAAC	A	5147.84	PASS	AB=0.990;AC=13;AF=0.232;AN=56;BaseQRankSum=4.131;DP=641;FS=13.015;HRun=0;HaplotypeScore=166.6020;InbreedingCoeff=0.5135;MQ=64.55;MQ0=7;MQRankSum=-11.974;QD=21.18;ReadPosRankSum=0.379;VQSLOD=3.9932;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:47,2:48:76.62:1055,77,0	0/0:9,0:9:2.32:0,2,209	0/0:25,0:21:51.43:0,51,1012	0/0:28,0:21:35.66:0,36,833	1/1:35,2:37:85.46:1101,85,0	0/0:18,0:18:51.15:0,51,1102	0/0:25,0:23:51.15:0,51,1112	0/0:30,0:27:46.77:0,47,839	0/0:24,0:24:63.18:0,63,1245	0/0:25,0:24:69.10:0,69,1248	0/0:9,0:9:24.08:0,24,562	1/1:18,1:19:9.24:492,9,0	0/0:15,0:15:44.98:0,45,957	0/0:24,0:24:72.22:0,72,1522	0/0:20,0:20:54.18:0,54,1101	0/1:19,0:19:99:126,0,460	0/1:34,0:33:11.68:554,0,12	0/1:23,0:22:30.27:411,0,30	0/0:18,0:18:37.83:0,38,698	0/0:27,0:27:60.30:0,60,1558	0/0:21,0:20:54.15:0,54,1062	0/1:26,0:26:11.39:747,0,11	1/1:16,0:16:20.89:433,21,0	0/1:19,1:18:3.24:228,0,3	0/0:33,0:33:87.25:0,87,1825	0/0:17,0:16:45.14:0,45,1008	0/0:21,0:21:54.57:0,55,1012	0/0:8,0:8:24.08:0,24,581
chr10	55278907	.	AC	A	2560.66	PASS	AB=0.976;AC=12;AF=0.214;AN=56;BaseQRankSum=8.711;DP=658;FS=10.837;HRun=1;HaplotypeScore=147.4532;InbreedingCoeff=0.3441;MQ=62.21;MQ0=8;MQRankSum=-11.054;QD=10.54;ReadPosRankSum=-1.102;VQSLOD=0.4220;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:47,2:48:8.04:560,8,0	0/0:9,0:9:24.35:0,24,205	0/0:27,0:21:42.99:0,43,537	0/0:26,0:19:47.11:0,47,536	1/1:36,1:37:18.66:520,19,0	0/0:20,0:20:56.91:0,57,624	0/0:27,0:25:60.10:0,60,670	0/0:30,0:27:48.64:0,49,578	0/0:25,0:25:56.18:0,56,673	0/0:26,0:25:75.08:0,75,786	0/0:11,0:11:30.06:0,30,334	0/1:15,3:18:5.59:293,0,6	0/0:15,0:15:44.45:0,44,492	0/0:27,0:27:81.14:0,81,890	0/0:21,0:21:57.09:0,57,621	0/1:19,0:19:41.10:41,0,137	0/1:33,0:32:62.11:306,0,62	0/1:24,0:23:29.95:227,0,30	0/0:16,0:16:46.96:0,47,452	0/0:30,0:30:68.60:0,69,860	0/0:21,0:20:54.09:0,54,606	0/1:25,0:25:7.86:415,0,8	1/1:16,1:17:2.87:248,3,0	0/1:21,0:19:38.81:109,0,39	0/0:33,0:33:80.86:0,81,936	0/0:17,0:16:45.13:0,45,535	0/0:24,0:24:62.81:0,63,626	0/0:10,0:10:30.04:0,30,336
chr10	55278909	.	AAAAAAC	A	4856.73	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=3.474;DP=672;FS=1.687;HRun=0;HaplotypeScore=202.4711;InbreedingCoeff=0.6377;MQ=61.63;MQ0=8;MQRankSum=-8.410;QD=13.45;ReadPosRankSum=0.282;VQSLOD=3.7078;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:48,1:48:71.82:835,72,0	1/1:5,4:9:18.06:333,18,0	0/0:26,0:20:11.99:0,12,232	0/1:26,0:19:5.15:5,0,525	1/1:38,0:38:71.54:807,72,0	0/0:20,0:20:48.16:0,48,1053	0/0:27,0:25:39.13:0,39,857	0/1:33,0:30:99:176,0,403	0/0:27,0:27:60.20:0,60,1298	0/0:26,0:25:18.41:0,18,1111	0/0:11,0:11:24.08:0,24,526	1/1:19,0:19:33:425,33,0	0/0:16,0:16:45.12:0,45,1184	0/0:28,0:28:66.22:0,66,1906	0/0:22,0:22:39.13:0,39,852	0/1:18,0:18:37.74:38,0,720	1/1:34,0:33:29.04:406,29,0	1/1:24,0:23:29.94:366,30,0	0/1:16,0:16:79.67:80,0,257	0/1:30,0:30:38.79:39,0,1479	0/0:21,0:20:36.12:0,36,833	1/1:27,0:27:60.09:713,60,0	1/1:16,1:17:36.09:490,36,0	1/1:21,0:19:14.70:145,15,0	0/0:34,0:34:75.25:0,75,1685	0/0:18,0:17:32.70:0,33,635	0/0:25,0:25:60.20:0,60,1280	0/0:10,0:10:30.10:0,30,663
chr10	55278915	.	C	CA	2936.69	PASS	AB=0.654;AC=9;AF=0.161;AN=56;BaseQRankSum=6.626;DP=675;FS=3.160;HRun=6;HaplotypeScore=155.4194;InbreedingCoeff=0.0526;MQ=59.44;MQ0=8;MQRankSum=-9.776;QD=12.88;ReadPosRankSum=0.691;VQSLOD=1.6643;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:16,35:50:69.67:671,0,70	0/0:9,0:9:19.52:0,20,149	0/0:23,0:17:0.88:0,1,168	0/0:24,0:18:0.65:0,1,314	0/1:13,24:37:54.74:572,0,55	0/0:22,0:22:60.15:0,60,640	0/0:33,0:31:72.13:0,72,753	0/0:33,0:30:37.65:0,38,497	0/0:26,0:26:63.14:0,63,669	0/0:24,0:23:67.41:0,67,716	0/0:11,0:11:27.07:0,27,290	0/1:11,10:21:8.03:424,0,8	0/0:16,0:16:45.11:0,45,483	0/0:27,0:27:75.19:0,75,806	0/0:19,0:19:51.13:0,51,548	0/0:18,0:18:17.57:0,18,422	0/1:18,17:34:99:323,0,143	0/1:12,12:23:70.93:249,0,71	0/0:17,0:17:19.36:0,19,324	0/0:30,0:30:85.10:0,85,912	0/0:22,0:21:54.13:0,54,577	1/1:14,12:26:19.11:488,19,0	0/1:11,5:16:32.74:251,0,33	0/1:6,12:17:59.79:101,0,60	0/0:33,0:33:79.44:0,79,840	0/0:23,0:22:54.12:0,54,567	0/0:25,0:25:63.08:0,63,661	0/0:11,0:11:33.08:0,33,354
chr10	55278929	.	A	AACAAAC	6168.27	PASS	AB=0.993;AC=38;AF=0.679;AN=56;BaseQRankSum=0.192;DP=690;FS=10.238;HRun=0;HaplotypeScore=203.6515;InbreedingCoeff=0.3924;MQ=56.75;MQ0=10;MQRankSum=3.315;QD=10.45;ReadPosRankSum=0.383;VQSLOD=2.8679;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:52,0:52:99:102,0,1282	0/1:8,0:8:81.84:82,0,226	0/0:12,0:8:16.86:0,17,275	0/0:22,0:19:25.63:0,26,834	0/1:32,0:32:99:140,0,1228	1/1:1,0:26:51.88:274,52,0	1/1:1,0:30:55.99:207,56,0	1/1:5,23:32:84.84:1596,85,0	1/1:1,0:30:56.94:278,57,0	1/1:4,0:28:66.33:440,66,0	1/1:0,0:11:25.21:153,25,0	0/0:27,0:27:48.83:0,49,1402	0/0:16,0:16:48.12:0,48,990	0/0:22,0:22:66.23:0,66,1596	1/1:0,0:18:36:125,36,0	1/1:4,0:20:46.81:274,47,0	0/1:33,0:32:15.94:16,0,1168	0/1:24,0:24:42.55:43,0,792	1/1:5,0:22:50.50:492,50,0	1/1:2,0:32:76.72:479,77,0	1/1:1,0:19:38.66:135,39,0	0/1:28,0:28:63.84:64,0,1241	0/1:16,0:16:48.25:48,0,711	0/1:16,0:17:0.36:0,0,519	1/1:1,0:36:63.69:333,64,0	1/1:0,0:20:52.77:478,53,0	1/1:1,0:32:57.38:321,57,0	1/1:0,0:12:26.21:90,26,0
chr10	55280253	.	TA	T	4038.65	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=13.579;DP=661;FS=4.103;HRun=9;HaplotypeScore=64.0787;InbreedingCoeff=0.9991;MQ=71.16;MQ0=0;MQRankSum=-1.057;QD=21.83;ReadPosRankSum=3.047;VQSLOD=4.7009;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,31:35:91.29:827,91,0	0/0:11,0:11:33.10:0,33,380	0/0:15,0:15:38.58:0,39,408	0/0:11,0:11:21.05:0,21,231	1/1:5,24:29:72.04:659,72,0	0/0:18,0:18:45.13:0,45,519	0/0:24,0:24:63.19:0,63,725	0/0:25,0:25:54.15:0,54,615	0/0:25,0:25:75.20:0,75,848	0/0:28,0:28:75.21:0,75,857	0/0:27,0:27:75.22:0,75,866	1/1:9,20:29:57.01:522,57,0	0/0:24,0:24:63.12:0,63,686	0/0:23,0:23:63.19:0,63,727	0/0:30,0:30:81.23:0,81,925	0/0:25,0:25:51.91:0,52,776	1/1:1,21:22:60.03:549,60,0	1/1:1,14:15:33.02:302,33,0	0/0:26,0:26:63.16:0,63,703	0/0:29,0:29:81.24:0,81,935	0/0:25,0:25:41.57:0,42,713	1/1:4,16:20:41.83:384,42,0	1/1:2,17:19:41.65:384,42,0	1/1:1,15:16:45.02:412,45,0	0/0:33,0:33:90.27:0,90,1039	0/0:28,0:28:78.23:0,78,899	0/0:38,0:37:99:0,114,1314	0/0:11,0:11:30.07:0,30,335
chr10	55281056	.	GT	G	9270.83	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=12.970;DP=675;FS=16.214;HRun=1;HaplotypeScore=66.7334;InbreedingCoeff=0.9989;MQ=77.97;MQ0=0;MQRankSum=-1.539;QD=39.45;ReadPosRankSum=1.398;VQSLOD=3.5542;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,45:45:99:1762,126,0	0/0:7,0:7:21.07:0,21,336	0/0:16,0:17:42.14:0,42,655	0/0:14,0:14:33.08:0,33,465	1/1:0,28:28:84.28:1174,84,0	0/0:12,0:12:36.12:0,36,575	0/0:26,0:26:78.24:0,78,1201	0/0:34,0:34:99:0,102,1632	0/0:21,0:21:63.21:0,63,1007	0/0:30,0:30:90.31:0,90,1438	0/0:16,0:16:45.15:0,45,719	1/1:0,34:34:99:1385,99,0	0/0:22,0:22:66.22:0,66,1049	0/0:26,0:26:78.25:0,78,1224	0/0:23,0:23:69.24:0,69,1103	0/0:23,0:23:69.22:0,69,1078	1/1:0,35:35:90.30:1258,90,0	1/1:0,18:18:51.17:713,51,0	0/0:24,0:24:72.25:0,72,1144	0/0:25,0:25:72.25:0,72,1143	0/0:30,0:30:87.25:0,87,1341	1/1:0,28:28:78.26:1091,78,0	1/1:0,23:23:66.22:923,66,0	1/1:0,24:24:69.23:965,69,0	0/0:18,0:18:54.17:0,54,838	0/0:37,0:37:99:0,111,1770	0/0:26,0:26:78.25:0,78,1217	0/0:9,0:9:24.55:0,25,384
chr10	55281603	.	CGGA	C	488.59	PASS	AC=2;AF=0.037;AN=54;BaseQRankSum=2.009;DP=255;FS=5.094;HRun=0;HaplotypeScore=48.7333;InbreedingCoeff=0.4247;MQ=74.80;MQ0=0;MQRankSum=-5.233;QD=27.14;ReadPosRankSum=1.633;VQSLOD=3.0761;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:24.02:0,24,363	0/0:5,0:5:12.01:0,12,183	0/0:8,0:7:14.41:0,14,254	0/0:10,0:9:16.47:0,16,171	0/0:3,0:3:3.01:0,3,66	0/0:6,0:6:10.19:0,10,93	0/0:22,0:22:36:0,36,575	1/1:10,7:18:50.88:582,51,0	0/0:9,0:9:15.04:0,15,293	0/0:5,0:5:8.94:0,9,69	0/0:4,0:4:6.02:0,6,133	0/0:9,0:9:8.98:0,9,151	0/0:8,0:8:15.05:0,15,312	0/0:13,0:13:29.21:0,29,396	0/0:6,0:6:6.01:0,6,93	0/0:4,0:4:9.01:0,9,119	0/0:14,0:14:21.04:0,21,378	0/0:12,0:12:24.03:0,24,428	0/0:3,0:3:6.02:0,6,114	0/0:3,0:3:7.27:0,7,125	0/0:25,0:25:54.90:0,55,892	0/0:6,0:6:9.01:0,9,102	./.	0/0:10,0:10:26.98:0,27,338	0/0:10,0:10:6:0,6,90	0/0:6,0:6:9:0,9,144	0/0:16,0:16:31.26:0,31,403	0/0:3,0:3:8.74:0,9,76
chr10	55281613	.	C	CG	538.76	PASS	AB=0.896;AC=36;AF=0.720;AN=50;BaseQRankSum=-1.658;DP=165;FS=8.078;HRun=10;HaplotypeScore=37.5315;InbreedingCoeff=0.2587;MQ=66.48;MQ0=0;MQRankSum=-1.289;QD=3.90;ReadPosRankSum=-2.167;VQSLOD=-0.7367;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,1:4:3.01:32,3,0	1/1:3,0:3:0.17:20,0,0	0/0:7,0:6:11.95:0,12,93	0/0:5,0:4:8.89:0,9,64	./.	0/1:3,1:4:0.12:0,0,0	0/1:15,1:16:11.68:67,0,12	0/0:3,0:10:10.63:0,11,30	1/1:5,1:6:3.95:34,4,0	1/1:5,0:5:2.90:16,3,0	1/1:1,0:3:2.84:14,3,0	1/1:8,0:8:5.90:27,6,0	0/1:6,1:7:12.67:63,0,13	1/1:10,1:11:6.06:56,6,0	1/1:4,0:4:4.82:16,5,0	1/1:0,0:3:1.55:4,2,0	1/1:6,3:12:21.10:147,21,0	1/1:6,1:7:2.90:33,3,0	0/1:3,0:3:0:0,0,0	0/1:2,2:4:0:0,0,0	1/1:16,1:17:8.98:81,9,0	1/1:3,0:3:2.97:21,3,0	./.	0/1:1,0:1:0:0,0,0	0/1:5,0:5:0:0,0,0	1/1:3,1:4:0.47:1,0,0	0/1:7,1:8:14.24:32,0,14	./.
chr10	55282246	.	C	CA	1102.43	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.408;DP=840;FS=0.719;HRun=0;HaplotypeScore=86.5140;InbreedingCoeff=0.9998;MQ=83.34;MQ0=0;MQRankSum=0.872;QD=42.40;ReadPosRankSum=-3.233;VQSLOD=2.7354;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,147,2054	0/0:17,0:17:51.17:0,51,712	0/0:28,0:28:66.60:0,67,1015	0/0:22,0:22:52.72:0,53,760	0/0:36,0:36:99:0,105,1443	0/0:18,0:18:48.12:0,48,647	0/0:29,0:29:87.25:0,87,1192	1/1:2,24:26:75.26:1197,75,0	0/0:20,0:20:60.19:0,60,820	0/0:34,0:34:96.22:0,96,1277	0/0:13,0:13:36.12:0,36,503	0/0:42,0:42:99:0,120,1650	0/0:22,0:22:66.20:0,66,903	0/0:35,0:35:99:0,105,1455	0/0:34,0:34:99:0,102,1423	0/0:34,0:34:99:0,99,1382	0/0:43,0:43:99:0,126,1722	0/0:15,0:15:45.15:0,45,629	0/0:25,0:25:69.23:0,69,951	0/0:38,0:38:99:0,111,1529	0/0:86,0:86:99:0,244,3371	0/0:27,0:27:72.23:0,72,989	0/0:21,0:21:54.14:0,54,752	0/0:34,0:34:99:0,99,1382	0/0:28,0:28:81.27:0,81,1129	0/0:21,0:21:60.20:0,60,837	0/0:27,0:27:78.23:0,78,1045	0/0:14,0:14:42.14:0,42,587
chr10	55282487	.	ACCT	A	14451.08	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=16.950;DP=758;FS=1.556;HRun=0;HaplotypeScore=118.9389;InbreedingCoeff=0.9998;MQ=78.01;MQ0=0;MQRankSum=-7.127;QD=41.41;ReadPosRankSum=2.204;VQSLOD=6.2404;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,120,2629	0/0:27,0:27:81.26:0,81,1745	0/0:22,0:22:34.66:0,35,1050	0/0:20,0:20:45.11:0,45,846	0/0:27,0:27:72.23:0,72,1547	1/1:2,27:29:75.21:1177,75,0	1/1:1,36:37:99:1552,99,0	0/0:26,0:26:60.21:0,60,1299	1/1:1,22:23:63.21:1007,63,0	1/1:4,29:33:90.28:1431,90,0	1/1:1,12:13:33.07:489,33,0	0/0:41,0:41:99:0,111,2373	0/0:25,0:25:72.25:0,72,1589	0/0:25,0:25:75.26:0,75,1651	1/1:0,21:21:63.21:1013,63,0	1/1:0,18:18:51.17:803,51,0	0/0:39,0:39:99:0,114,2495	0/0:33,0:33:96.33:0,96,2118	1/1:3,16:19:48.16:761,48,0	1/1:1,22:23:60.20:964,60,0	1/1:1,45:46:99:1604,106,0	0/0:22,0:22:63.20:0,63,1330	0/0:22,0:22:54.19:0,54,1188	0/0:35,0:34:87.28:0,87,1859	1/1:0,24:24:69.19:1081,69,0	1/1:1,25:26:69.21:1074,69,0	1/1:0,24:24:66.22:1061,66,0	1/1:2,11:13:27.09:434,27,0
chr10	55283347	.	C	CAAA	14557.82	PASS	AB=1.000;AC=49;AF=0.875;AN=56;BaseQRankSum=-0.959;DP=632;FS=0.621;HRun=10;HaplotypeScore=109.9487;InbreedingCoeff=0.5257;MQ=68.95;MQ0=10;MQRankSum=-3.427;QD=24.26;ReadPosRankSum=3.467;VQSLOD=3.2899;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:40,0:39:78.24:941,78,0	0/1:5,0:5:13.59:14,0,97	0/1:35,0:23:9.50:9,0,93	0/1:50,0:20:31.26:31,0,40	1/1:21,0:21:45.61:544,46,0	1/1:2,13:15:33.11:620,33,0	1/1:0,10:11:27.07:484,27,0	1/1:29,0:29:22.04:492,22,0	1/1:1,17:20:27.06:438,27,0	1/1:5,17:25:45.08:745,45,0	1/1:6,24:31:81.10:1363,81,0	1/1:31,0:31:62.77:761,63,0	0/0:13,0:13:27.03:0,27,328	0/0:18,0:19:46.47:0,46,566	1/1:14,11:25:66.14:1104,66,0	1/1:3,1:21:11.66:171,12,0	1/1:27,0:27:51.16:616,51,0	1/1:20,0:20:27:306,27,0	1/1:2,13:14:39.07:655,39,0	1/1:10,15:26:64.76:1118,65,0	1/1:5,8:13:21.07:404,21,0	1/1:15,0:14:23.49:225,23,0	1/1:24,0:23:36.84:480,37,0	1/1:7,0:7:12.04:145,12,0	1/1:4,17:26:51.13:881,51,0	1/1:10,14:24:54.08:935,54,0	1/1:4,17:22:33.09:600,33,0	1/1:0,12:14:29.44:477,29,0
chr10	55283348	.	A	AAAAC	12551.81	PASS	AB=0.998;AC=42;AF=0.750;AN=56;BaseQRankSum=-1.823;DP=645;FS=11.677;HRun=0;HaplotypeScore=127.7995;InbreedingCoeff=0.3074;MQ=68.95;MQ0=10;MQRankSum=-1.733;QD=20.68;ReadPosRankSum=7.222;VQSLOD=3.2209;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,38:40:81.27:2020,81,0	0/0:5,0:5:9.50:0,10,172	0/1:36,0:24:7.26:7,0,142	0/1:53,0:20:0.76:1,0,124	1/1:2,19:21:47.19:1106,47,0	1/1:17,0:17:14.13:183,14,0	1/1:11,0:11:23.09:130,23,0	1/1:4,27:36:83.90:1367,84,0	1/1:20,0:20:22.71:175,23,0	0/1:24,0:24:72.04:126,0,72	1/1:31,0:31:22.55:397,23,0	1/1:0,32:34:62.69:1569,63,0	0/0:13,0:13:36.10:0,36,591	0/0:20,0:20:51.12:0,51,875	1/1:26,0:25:32.06:324,32,0	0/1:21,0:21:60.14:158,0,60	1/1:3,24:26:51.17:1272,51,0	1/1:0,20:20:27.09:657,27,0	1/1:15,0:14:9.25:130,9,0	0/1:27,0:26:4.34:252,0,4	0/1:13,0:13:18.69:86,0,19	1/1:3,12:14:29.91:503,30,0	1/1:1,22:23:50.71:1062,51,0	1/1:1,7:8:12.04:298,12,0	1/1:26,0:26:17.68:270,18,0	0/1:25,0:24:25.10:189,0,25	0/1:21,0:21:12.78:125,0,13	1/1:14,0:14:14.08:144,14,0
chr10	55284507	.	CG	C	1427.24	PASS	AB=0.913;AC=38;AF=0.760;AN=50;BaseQRankSum=-4.482;DP=236;FS=0.913;HRun=11;HaplotypeScore=41.9647;InbreedingCoeff=0.3459;MQ=69.65;MQ0=0;MQRankSum=0.443;QD=7.10;ReadPosRankSum=1.408;VQSLOD=1.1050;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,2:14:16.18:90,16,0	./.	0/0:9,0:6:1.40:0,1,68	0/0:11,0:7:8.59:0,9,54	1/1:4,1:5:2.98:23,3,0	1/1:0,2:3:8.03:55,8,0	0/1:17,3:20:27.60:116,0,28	./.	1/1:11,2:13:16.64:142,17,0	1/1:11,0:10:0.35:32,0,0	1/1:6,0:6:5.96:45,6,0	0/1:9,1:9:10.53:22,0,11	0/1:8,0:8:0.59:1,0,29	0/0:8,0:8:9.88:0,10,84	1/1:6,6:12:10.23:95,10,0	0/0:3,0:3:2.96:0,3,19	1/1:14,2:16:28.45:186,28,0	0/1:12,2:14:5.73:109,0,6	1/1:4,5:9:10.06:77,10,0	1/1:2,2:5:5.72:37,6,0	1/1:5,5:10:5.84:38,6,0	1/1:8,0:8:8.62:69,9,0	1/1:4,0:4:9.55:51,10,0	1/1:1,8:9:14.95:119,15,0	1/1:4,0:6:10.92:57,11,0	1/1:6,1:7:10.51:75,11,0	1/1:8,2:10:17.03:134,17,0	./.
chr10	55284714	.	AC	A	13704.11	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=3.019;DP=604;FS=6.160;HRun=7;HaplotypeScore=62.2503;InbreedingCoeff=0.9907;MQ=85.29;MQ0=0;MQRankSum=-6.219;QD=26.35;ReadPosRankSum=2.676;VQSLOD=5.6608;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,44:49:99:1163,114,0	1/1:0,8:8:24.05:245,24,0	0/0:23,0:23:45.09:0,45,516	0/0:17,0:17:45.04:0,45,529	1/1:2,17:19:51.12:520,51,0	1/1:0,13:13:36.08:367,36,0	1/1:3,21:24:57.13:581,57,0	1/1:6,29:35:87.13:870,87,0	1/1:3,20:23:60.14:612,60,0	1/1:0,16:16:45.10:459,45,0	1/1:3,16:19:48.11:490,48,0	1/1:2,12:14:33.07:337,33,0	0/0:21,0:21:60.18:0,60,741	0/0:23,0:23:63.16:0,63,775	1/1:1,23:24:69.16:704,69,0	1/1:1,20:21:51.12:520,51,0	1/1:4,26:30:75.17:765,75,0	1/1:1,18:19:48.11:490,48,0	1/1:2,12:14:36.05:353,36,0	1/1:0,16:16:48.11:490,48,0	1/1:3,35:38:99:1010,99,0	1/1:1,21:22:60.14:612,60,0	1/1:0,20:20:54.12:551,54,0	1/1:1,30:31:81.18:826,81,0	1/1:1,17:18:48.11:489,48,0	1/1:2,19:21:60.13:607,60,0	1/1:3,18:21:51.11:520,51,0	1/1:0,5:5:12.03:122,12,0
chr10	55284928	.	AGG	A	1194.62	PASS	AC=14;AF=0.259;AN=54;BaseQRankSum=7.136;DP=485;FS=0.513;HRun=5;HaplotypeScore=93.5619;InbreedingCoeff=0.9603;MQ=59.21;MQ0=36;MQRankSum=0.179;QD=11.95;ReadPosRankSum=2.487;VQSLOD=-0.2925;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:20:41.85:331,42,0	0/0:5,0:5:15.02:0,15,205	0/0:44,0:16:29.50:0,29,353	0/0:53,0:20:25.13:0,25,242	./.	0/0:17,0:17:44.33:0,44,366	0/0:20,0:19:47.51:0,48,429	0/0:24,0:23:56.62:0,57,589	0/0:12,0:12:34.82:0,35,295	0/0:18,0:18:16.14:0,16,282	0/0:10,0:8:17.98:0,18,154	1/1:9,0:8:14.99:136,15,0	0/0:16,0:16:48.02:0,48,625	0/0:13,0:13:35.59:0,36,517	0/0:12,0:9:23.98:0,24,210	0/0:14,0:14:4.93:0,5,54	1/1:19,0:18:35.07:245,35,0	1/1:7,0:6:14.95:117,15,0	0/0:17,0:16:42.38:0,42,364	0/0:11,0:10:23.85:0,24,208	0/0:24,0:23:44.63:0,45,373	1/1:13,0:13:20.91:164,21,0	1/1:13,0:13:26.15:189,26,0	1/1:19,0:18:27.21:207,27,0	0/0:16,0:13:29.82:0,30,238	0/0:19,0:19:50.25:0,50,449	0/0:20,0:19:45.18:0,45,386	0/0:9,0:7:18.01:0,18,200
chr10	55284939	.	GAGAGAC	G	3888.59	PASS	AB=1.000;AC=45;AF=0.833;AN=54;BaseQRankSum=-2.201;DP=409;FS=22.975;HRun=0;HaplotypeScore=97.4760;InbreedingCoeff=0.5761;MQ=55.00;MQ0=37;MQRankSum=1.858;QD=11.11;ReadPosRankSum=0.371;VQSLOD=0.5938;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:19:39.70:303,40,0	0/0:4,0:4:5.18:0,5,80	0/0:35,0:10:10.86:0,11,100	0/1:43,0:11:1.90:2,0,23	./.	1/1:15,0:15:29.96:247,30,0	1/1:15,0:14:23.23:165,23,0	1/1:24,0:22:44.29:336,44,0	1/1:8,0:8:18.41:141,18,0	1/1:16,0:16:41.86:338,42,0	1/1:10,0:8:11.99:100,12,0	1/1:7,0:4:5.98:46,6,0	0/1:15,0:15:0.98:1,0,190	0/0:15,0:15:28.78:0,29,345	1/1:10,0:7:17.96:144,18,0	1/1:2,13:15:9.03:185,9,0	1/1:18,0:17:30.35:254,30,0	1/1:5,0:4:8.99:75,9,0	1/1:14,0:12:32.98:286,33,0	1/1:6,0:5:8.94:68,9,0	1/1:16,0:15:30.10:233,30,0	1/1:10,0:10:11.98:99,12,0	1/1:10,0:10:14.97:122,15,0	1/1:17,0:16:3.21:64,3,0	1/1:11,0:8:11.99:101,12,0	1/1:16,0:15:12.95:262,13,0	1/1:18,0:17:24.17:267,24,0	0/1:12,0:10:45.87:51,0,46
chr10	55284943	.	GAC	G	4147.25	PASS	AB=0.926;AC=45;AF=0.833;AN=54;BaseQRankSum=-1.710;DP=385;FS=9.355;HRun=0;HaplotypeScore=73.0885;InbreedingCoeff=0.4142;MQ=51.73;MQ0=36;MQRankSum=2.306;QD=13.64;ReadPosRankSum=-0.198;VQSLOD=2.6588;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:19:39.70:303,40,0	0/0:4,0:4:6.88:0,7,51	0/0:32,0:9:10.86:0,11,100	0/0:40,0:9:2.17:0,2,28	./.	1/1:14,0:14:29.96:247,30,0	1/1:14,0:12:28.67:212,29,0	1/1:19,0:17:44.16:336,44,0	1/1:10,0:10:23.68:189,24,0	1/1:1,15:16:41.86:338,42,0	1/1:9,0:7:11.99:100,12,0	1/1:8,0:5:8.98:71,9,0	0/1:13,0:13:36.32:36,0,148	0/1:10,4:14:22.84:23,0,134	1/1:11,0:8:20.96:169,21,0	1/1:13,0:13:8.43:50,8,0	1/1:19,0:18:40.45:288,40,0	1/1:5,0:4:8.99:75,9,0	1/1:14,0:12:32.98:286,33,0	1/1:5,0:4:8.94:68,9,0	1/1:16,0:15:30.42:245,30,0	1/1:8,0:8:11.98:99,12,0	1/1:9,0:9:14.97:122,15,0	1/1:16,0:15:6.28:88,6,0	1/1:11,0:8:11.99:101,12,0	1/1:13,0:12:31.86:283,32,0	1/1:18,0:17:47.77:369,48,0	0/1:10,0:8:21.90:51,0,22
chr10	55284992	.	AG	A	440.94	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=5.556;DP=572;FS=3.470;HRun=2;HaplotypeScore=84.0824;InbreedingCoeff=0.7593;MQ=63.49;MQ0=29;MQRankSum=-6.270;QD=18.37;ReadPosRankSum=-1.380;VQSLOD=3.3685;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,2:35:84.09:0,84,1120	0/1:5,0:5:4.32:10,0,4	0/0:57,0:22:63.10:0,63,769	0/0:68,0:23:53.70:0,54,704	0/0:14,0:14:27.09:0,27,358	0/0:24,0:24:57.08:0,57,724	0/0:11,0:10:27.09:0,27,356	1/1:2,17:15:42.13:533,42,0	0/0:15,0:15:39.61:0,40,518	0/0:18,0:18:49.44:0,49,613	0/0:17,0:16:31.73:0,32,403	0/0:20,0:18:44.47:0,44,569	0/0:12,0:12:29.25:0,29,338	0/0:10,0:10:14.37:0,14,141	0/0:13,0:13:33.11:0,33,433	0/0:17,0:17:35.91:0,36,434	0/0:20,0:20:20.25:0,20,555	0/0:13,0:13:39.08:0,39,487	0/0:13,0:13:34.26:0,34,445	0/0:15,0:15:36.12:0,36,477	0/0:28,1:28:60.18:0,60,786	0/0:19,0:18:36.12:0,36,477	0/0:19,0:19:47.90:0,48,633	0/0:19,0:19:33:0,33,398	0/0:16,0:15:30.10:0,30,399	0/0:17,0:16:41.95:0,42,565	0/0:21,0:21:45.15:0,45,600	0/0:16,0:15:42.75:0,43,493
chr10	55284993	.	G	GGA	60.10	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=4.598;DP=578;FS=2.957;HRun=0;HaplotypeScore=98.2247;InbreedingCoeff=0.8496;MQ=63.50;MQ0=29;MQRankSum=-4.792;QD=2.40;ReadPosRankSum=0.021;VQSLOD=1.5420;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:84.24:0,84,1057	1/1:0,4:4:9.03:137,9,0	0/0:57,0:22:56.24:0,56,678	0/0:68,0:23:49.54:0,50,582	0/0:14,0:14:26.98:0,27,348	0/0:24,0:24:56.85:0,57,703	0/0:10,0:9:27.08:0,27,340	1/1:19,0:17:2.98:22,3,0	0/0:15,0:15:39.06:0,39,471	0/0:18,0:18:39.11:0,39,483	0/0:18,0:17:30.05:0,30,365	0/0:21,0:19:41.58:0,42,531	0/0:12,0:12:30.09:0,30,366	0/0:10,0:10:15.04:0,15,179	0/0:13,0:13:33.11:0,33,427	0/0:17,0:17:36.12:0,36,463	0/0:19,0:21:44.73:0,45,511	0/0:13,0:13:33.84:0,34,420	0/0:13,0:13:26.10:0,26,330	0/0:15,0:15:35.90:0,36,458	0/0:30,0:29:58.43:0,58,773	0/0:19,0:18:35.80:0,36,445	0/0:19,0:19:48.10:0,48,593	0/0:18,0:19:21.81:0,22,334	0/0:15,0:15:29.90:0,30,391	0/0:18,0:17:36.11:0,36,457	0/0:22,0:22:44.93:0,45,565	0/0:16,0:15:18.32:0,18,401
chr10	55285121	.	C	CA	852.91	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-8.710;DP=572;FS=6.269;HRun=7;HaplotypeScore=54.8048;InbreedingCoeff=0.9393;MQ=69.50;MQ0=0;MQRankSum=-0.029;QD=27.51;ReadPosRankSum=-5.119;VQSLOD=1.8553;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:81.12:0,81,782	0/0:8,0:8:21.03:0,21,203	0/0:12,0:12:26.96:0,27,240	0/0:8,0:8:9.01:0,9,87	0/0:27,0:27:72.11:0,72,695	0/0:23,0:23:60.09:0,60,579	0/0:20,0:20:48:0,48,452	1/1:3,28:31:81.18:948,81,0	0/0:18,0:18:42.06:0,42,405	0/0:33,0:34:95.19:0,95,904	0/0:22,0:22:47.97:0,48,450	0/0:17,0:16:36.05:0,36,347	0/0:18,0:18:42.06:0,42,405	0/0:18,0:18:42.04:0,42,400	0/0:10,0:10:30.01:0,30,281	0/0:16,0:16:48.08:0,48,463	0/0:23,0:23:63.05:0,63,594	0/0:17,0:17:45.02:0,45,420	0/0:19,0:19:45.07:0,45,434	0/0:21,0:21:51.06:0,51,486	0/0:10,0:10:30.05:0,30,290	0/0:23,0:23:57.06:0,57,541	0/0:27,0:27:66.08:0,66,631	0/0:17,0:17:42.05:0,42,399	0/0:24,0:24:60.08:0,60,579	0/0:29,0:29:78.12:0,78,753	0/0:33,0:33:81.09:0,81,775	0/0:16,0:16:48.08:0,48,464
chr10	55285303	.	TG	T	10170.87	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=7.810;DP=503;FS=3.011;HRun=8;HaplotypeScore=106.3104;InbreedingCoeff=0.9976;MQ=71.93;MQ0=0;MQRankSum=-6.303;QD=24.16;ReadPosRankSum=4.029;VQSLOD=4.7991;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:22,6:28:81.07:754,81,0	0/0:2,0:9:20.13:0,20,102	0/0:23,0:18:41.08:0,41,406	0/0:18,0:18:39.09:0,39,415	1/1:10,4:14:41.92:369,42,0	1/1:18,2:20:48.04:451,48,0	1/1:6,4:10:24.02:223,24,0	1/1:7,20:26:72.06:669,72,0	1/1:16,6:22:57.06:534,57,0	1/1:12,7:18:38.30:411,38,0	1/1:14,6:18:47.42:403,47,0	1/1:12,7:19:47.95:425,48,0	0/0:16,0:16:42.12:0,42,493	0/0:16,0:16:45.11:0,45,520	1/1:13,3:16:44.98:408,45,0	1/1:13,3:16:48.06:452,48,0	1/1:16,5:21:59.98:560,60,0	1/1:11,9:20:48.03:451,48,0	1/1:11,4:14:39:358,39,0	1/1:11,11:22:60.02:556,60,0	1/1:9,6:15:35.82:303,36,0	1/1:7,5:12:30.04:284,30,0	1/1:6,6:12:36.04:336,36,0	1/1:14,8:22:48.03:444,48,0	1/1:10,5:14:36.02:331,36,0	1/1:19,7:26:75.04:702,75,0	1/1:12,7:19:54.07:514,54,0	1/1:10,1:11:24.04:232,24,0
chr10	55285317	.	T	TG	16566.44	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=1.578;DP=514;FS=0.000;HRun=0;HaplotypeScore=89.3413;InbreedingCoeff=0.9979;MQ=70.12;MQ0=0;MQRankSum=-9.123;QD=38.00;ReadPosRankSum=3.007;VQSLOD=5.0487;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:22,12:34:96.16:1325,96,0	0/0:7,0:7:21.07:0,21,284	0/0:24,0:19:49.72:0,50,580	0/0:18,0:18:50.78:0,51,602	1/1:10,4:14:42.03:563,42,0	1/1:14,3:17:48.16:695,48,0	1/1:5,4:9:27.09:383,27,0	1/1:9,22:30:87.15:1104,87,0	1/1:10,5:15:45.15:645,45,0	1/1:11,10:20:57.13:787,57,0	1/1:13,10:21:57.16:772,57,0	1/1:7,8:15:45.15:632,45,0	0/0:14,0:14:39.09:0,39,508	0/0:15,0:15:45.13:0,45,597	1/1:14,6:20:60.18:835,60,0	1/1:13,4:17:51.16:712,51,0	1/1:19,7:26:75.17:1004,75,0	1/1:7,12:19:51.09:712,51,0	1/1:12,11:21:60.18:834,60,0	1/1:12,7:19:56.98:705,57,0	1/1:6,7:13:36:455,36,0	1/1:7,4:11:27.08:370,27,0	1/1:8,4:12:33.07:429,33,0	1/1:13,12:25:63.10:831,63,0	1/1:8,6:13:36.12:506,36,0	1/1:17,10:27:78.26:1124,78,0	1/1:12,9:21:60.03:814,60,0	1/1:10,0:10:24.06:330,24,0
chr10	55285496	.	CT	C	4176.14	PASS	AB=0.655;AC=42;AF=0.778;AN=54;BaseQRankSum=2.683;DP=620;FS=0.568;HRun=13;HaplotypeScore=85.2576;InbreedingCoeff=0.4712;MQ=61.27;MQ0=11;MQRankSum=-0.196;QD=7.63;ReadPosRankSum=5.439;VQSLOD=2.7510;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,0:40:57.03:167,57,0	0/1:13,2:15:4.80:5,0,273	0/0:26,0:11:0.05:0,0,20	0/0:21,0:12:14:0,14,78	1/1:4,0:32:47.42:138,47,0	0/1:6,17:23:45.70:199,0,46	0/1:7,21:28:21.23:183,0,21	1/1:7,0:35:20.17:85,20,0	./.	0/1:7,16:23:8.97:252,0,9	1/1:3,17:20:38.74:284,39,0	1/1:1,0:18:17.37:50,17,0	0/0:12,0:12:13.73:0,14,168	0/0:13,1:14:8.12:0,8,230	1/1:5,7:12:17.88:131,18,0	1/1:5,12:17:32.79:238,33,0	1/1:2,0:30:36.66:107,37,0	1/1:9,0:31:24.39:77,24,0	1/1:9,19:28:29.51:367,30,0	1/1:6,17:23:43.57:325,44,0	1/1:6,3:8:7.99:50,8,0	1/1:4,0:24:17.48:66,17,0	1/1:3,0:25:27.94:82,28,0	1/1:4,0:18:14.25:42,14,0	1/1:1,19:21:43.78:311,44,0	1/1:4,27:30:76.58:553,77,0	1/1:8,10:18:2.51:218,3,0	1/1:2,14:17:34.85:247,35,0
chr10	55286800	.	TTA	T	9958.34	PASS	AB=1.000;AC=33;AF=0.589;AN=56;BaseQRankSum=-7.694;DP=579;FS=13.353;HRun=0;HaplotypeScore=105.3072;InbreedingCoeff=0.6072;MQ=71.33;MQ0=6;MQRankSum=2.492;QD=26.41;ReadPosRankSum=5.437;VQSLOD=5.3058;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:6,0:31:11.95:12,0,125	0/1:13,0:13:11.72:12,0,172	0/0:34,0:19:42.27:0,42,386	0/0:19,0:9:21.31:0,21,135	0/0:7,0:29:38.88:0,39,247	1/1:0,16:16:36.12:542,36,0	1/1:0,12:12:21.07:316,21,0	0/0:28,0:28:84.20:0,84,1496	1/1:0,20:20:54.18:813,54,0	1/1:0,28:28:81.11:1076,81,0	1/1:0,21:21:60.05:823,60,0	0/0:4,0:16:0.10:0,0,67	0/0:20,0:20:60.18:0,60,1059	0/0:17,0:17:50.94:0,51,885	1/1:0,21:21:42.08:632,42,0	1/1:0,19:18:39.13:586,39,0	0/1:5,0:25:12.63:13,0,63	0/0:0,0:20:25.86:0,26,75	1/1:0,16:16:41.92:543,42,0	1/1:0,27:27:77.47:1134,77,0	1/1:0,11:11:18.06:271,18,0	0/0:2,0:19:14.11:0,14,144	0/1:20,0:20:49.42:49,0,60	0/1:1,0:7:12.03:14,0,12	1/1:0,25:24:48.16:722,48,0	1/1:0,22:22:66.07:842,66,0	1/1:0,33:33:75.09:1127,75,0	1/1:0,9:10:30.09:432,30,0
chr10	55286801	.	T	TAA	4151.14	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=-6.023;DP=580;FS=3.652;HRun=11;HaplotypeScore=130.7432;InbreedingCoeff=0.9320;MQ=71.11;MQ0=6;MQRankSum=-2.725;QD=20.55;ReadPosRankSum=-3.794;VQSLOD=1.6373;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:31,1:32:49.86:638,50,0	0/0:13,0:13:22.55:0,23,160	0/1:34,0:19:2.61:3,0,139	0/0:19,0:9:18.31:0,18,139	1/1:28,0:29:63.03:737,63,0	0/0:16,0:16:33.87:0,34,162	0/0:12,0:12:19.63:0,20,94	0/0:28,0:28:75.05:0,75,712	0/0:20,0:20:50.66:0,51,242	0/0:28,0:28:65.71:0,66,313	0/0:21,0:21:53.71:0,54,264	1/1:17,0:19:42.14:577,42,0	0/0:20,0:20:54.02:0,54,516	0/0:16,0:17:47.80:0,48,447	0/0:21,0:21:39.39:0,39,188	0/0:19,0:18:36.63:0,37,175	1/1:23,0:24:48.14:665,48,0	1/1:20,0:20:51.17:725,51,0	0/0:16,0:16:33.78:0,34,164	0/0:27,0:27:70.32:0,70,336	0/0:11,0:11:16.86:0,17,81	1/1:18,0:18:36.08:490,36,0	1/1:3,16:19:11.62:101,12,0	1/1:7,0:7:15.05:215,15,0	0/0:25,0:24:45.11:0,45,215	0/0:22,0:22:44.79:0,45,216	0/0:33,0:33:69.83:0,70,336	0/0:10,0:10:28.15:0,28,135
chr10	55287568	.	C	CT	1138.02	PASS	AB=0.857;AC=20;AF=0.357;AN=56;BaseQRankSum=-1.311;DP=523;FS=0.000;HRun=15;HaplotypeScore=76.7185;InbreedingCoeff=0.1066;MQ=74.70;MQ0=3;MQRankSum=0.217;QD=4.53;ReadPosRankSum=-1.381;VQSLOD=1.2791;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:9,22:32:0.57:196,0,1	0/0:1,0:4:6.10:0,6,18	0/0:37,0:23:21.97:0,22,98	0/0:21,0:14:5.72:0,6,31	1/1:10,16:26:1.89:161,2,0	0/1:12,1:13:5.34:5,0,77	0/0:10,0:12:12.71:0,13,65	0/0:38,0:39:27.99:0,28,80	0/1:13,1:15:12.44:12,0,45	0/1:18,0:17:2.61:3,0,99	0/1:19,0:19:21.09:21,0,110	0/1:5,0:4:6.05:58,0,6	0/0:10,0:10:16.99:0,17,97	0/0:13,0:14:19.55:0,20,112	0/0:18,0:18:29.17:0,29,179	1/1:7,8:15:2.96:133,3,0	1/1:19,12:32:8.03:356,8,0	1/1:5,11:16:3.95:134,4,0	0/0:22,1:23:0.69:0,1,94	0/1:15,3:21:26.31:26,0,119	0/1:9,0:9:13.38:13,0,42	0/1:2,3:5:22.63:39,0,23	0/1:4,6:10:24.05:39,0,24	1/1:5,10:15:11.99:101,12,0	0/0:23,0:23:30.58:0,31,293	0/0:25,2:27:1.58:0,2,222	0/0:22,0:22:10.22:0,10,133	0/0:15,1:17:3.07:0,3,119
chr10	55287582	.	TTA	T	540.28	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=1.507;DP=503;FS=0.000;HRun=0;HaplotypeScore=72.8433;InbreedingCoeff=0.8056;MQ=74.43;MQ0=3;MQRankSum=-2.665;QD=16.88;ReadPosRankSum=-0.279;VQSLOD=3.3674;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:51.51:0,52,619	0/0:6,0:5:3.29:0,3,45	0/0:43,0:20:30.61:0,31,318	0/0:21,0:13:13.20:0,13,172	0/0:20,0:20:58.25:0,58,674	0/0:13,0:13:18.04:0,18,434	0/0:11,0:11:32.95:0,33,402	1/1:19,13:32:39.06:635,39,0	0/0:13,0:13:37.22:0,37,427	0/0:20,0:19:55.94:0,56,710	0/0:18,0:18:49.79:0,50,616	0/0:8,0:7:21.03:0,21,238	0/0:8,0:8:21.53:0,22,306	0/0:13,0:13:38.98:0,39,451	0/0:17,0:17:45.10:0,45,671	0/0:13,0:13:33.08:0,33,395	0/0:32,0:32:92.37:0,92,1124	0/0:17,0:17:36.01:0,36,394	0/0:16,0:16:42.05:0,42,511	0/0:21,0:21:25.36:0,25,533	0/0:7,0:7:21.04:0,21,274	0/0:7,0:7:20.20:0,20,198	0/0:11,0:11:21.03:0,21,253	0/0:11,0:11:15.03:0,15,175	0/0:26,0:26:78.14:0,78,1124	0/0:27,0:27:76.10:0,76,1051	0/0:23,0:23:69.02:0,69,815	0/0:17,0:17:46.59:0,47,580
chr10	55288057	.	TCACA	T	4339.50	PASS	AB=0.881;AC=26;AF=0.481;AN=54;BaseQRankSum=-0.732;DP=583;FS=5.555;HRun=0;HaplotypeScore=115.5914;InbreedingCoeff=0.8672;MQ=64.20;MQ0=4;MQRankSum=3.170;QD=16.07;ReadPosRankSum=2.693;VQSLOD=4.3068;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:33:43.67:0,44,769	1/1:2,0:8:18.02:167,18,0	0/1:25,0:14:0:0,0,0	0/0:16,0:9:3.90:0,4,62	0/0:11,0:20:27.09:0,27,505	1/1:10,16:26:33.11:505,33,0	0/1:11,4:16:0.45:111,0,0	0/0:23,0:23:18.03:0,18,274	1/1:9,11:21:30.09:453,30,0	1/1:10,11:21:33.09:471,33,0	1/1:8,7:15:8.99:115,9,0	0/0:9,0:19:18.06:0,18,338	0/0:13,0:17:32.76:0,33,602	0/0:17,0:17:33.11:0,33,783	1/1:7,15:22:30.57:473,31,0	0/0:12,0:27:23.76:0,24,448	0/0:18,0:30:18.51:0,19,287	0/0:14,0:17:21.07:0,21,353	./.	1/1:7,13:20:30.07:445,30,0	1/1:18,15:34:5.56:224,6,0	0/0:8,0:23:18.42:0,18,345	0/0:8,0:21:20.80:0,21,327	0/0:20,0:38:54.17:0,54,971	1/1:6,13:19:36.12:567,36,0	1/1:9,8:17:24:288,24,0	1/1:11,10:21:26.82:425,27,0	1/1:2,3:5:6.02:95,6,0
chr10	55288233	.	T	TTCTCTC	4707.56	PASS	AC=48;AF=0.923;AN=52;BaseQRankSum=3.027;DP=656;FS=0.000;HRun=0;HaplotypeScore=183.3835;InbreedingCoeff=0.4748;MQ=59.14;MQ0=14;MQRankSum=-3.762;QD=9.14;ReadPosRankSum=-1.282;VQSLOD=3.7971;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:35:21.99:384,22,0	1/1:5,0:10:12.02:197,12,0	./.	./.	1/1:19,0:19:8.99:171,9,0	1/1:22,6:34:6.02:169,6,0	1/1:12,0:17:17.15:383,17,0	1/1:35,0:41:35.31:500,35,0	1/1:17,0:23:8.72:191,9,0	1/1:15,2:17:6.49:156,6,0	1/1:14,3:21:3.01:78,3,0	1/1:11,0:11:3.01:75,3,0	0/0:14,0:16:15.05:0,15,273	0/0:22,0:22:33.09:0,33,529	1/1:15,4:21:3.01:96,3,0	1/1:19,0:23:6.01:92,6,0	1/1:25,0:26:6.02:146,6,0	1/1:11,0:14:9.03:162,9,0	1/1:12,0:15:12.04:218,12,0	1/1:21,0:23:12.03:190,12,0	1/1:10,0:14:12.04:205,12,0	1/1:16,0:19:8.99:106,9,0	1/1:19,0:25:11.99:211,12,0	1/1:10,0:13:2.55:62,3,0	1/1:19,4:22:8.45:271,8,0	1/1:19,0:21:21.42:249,21,0	1/1:15,0:20:15.05:301,15,0	1/1:7,0:9:7.64:94,8,0
chr10	55288259	.	C	CTCTCTCTCTCTCTT	7183.88	PASS	AB=1.000;AC=33;AF=0.589;AN=56;BaseQRankSum=1.279;DP=589;FS=4.942;HRun=0;HaplotypeScore=240.7957;InbreedingCoeff=-0.1619;MQ=51.15;MQ0=14;MQRankSum=-7.891;QD=14.72;ReadPosRankSum=3.745;VQSLOD=3.0558;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:33,0:34:49:970,49,0	0/1:9,0:9:42.07:84,0,42	0/0:25,0:11:0.49:0,0,107	0/0:39,0:10:11.81:0,12,103	1/1:9,0:23:18.31:371,18,0	0/1:32,0:31:97.50:103,0,98	0/1:21,0:20:89.88:90,0,119	0/1:30,0:30:99:318,0,239	0/1:24,0:24:77.79:143,0,78	0/1:18,0:17:99:161,0,171	0/1:15,0:15:40.43:46,0,40	1/1:6,6:15:15.05:398,15,0	0/0:13,0:13:23.89:0,24,600	0/0:22,0:22:48.08:0,48,1041	0/1:17,0:17:56.27:56,0,81	0/1:22,0:21:95.57:170,0,96	1/1:12,9:27:18.05:919,18,0	1/1:19,0:18:38.96:744,39,0	0/1:17,0:15:99:175,0,165	0/1:20,0:18:56.08:75,0,56	1/1:14,0:12:11.99:115,12,0	1/1:21,0:19:36.84:398,37,0	1/1:23,0:23:41.14:780,41,0	1/1:15,0:16:38.80:335,39,0	0/1:21,0:18:65.71:66,0,82	0/1:17,0:15:34.16:256,0,34	0/1:21,0:20:99:377,0,134	0/1:11,0:10:33.32:33,0,177
chr10	55288374	.	T	TG	968.36	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.273;DP=697;FS=40.313;HRun=1;HaplotypeScore=154.6102;InbreedingCoeff=0.8732;MQ=78.49;MQ0=0;MQRankSum=-11.640;QD=38.73;ReadPosRankSum=-1.211;VQSLOD=-0.2605;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:28.11:0,28,112	0/0:12,0:12:14.64:0,15,70	0/0:25,0:23:57.16:0,57,745	0/0:31,0:30:81.24:0,81,1081	0/0:27,0:27:19.44:0,19,97	0/0:19,0:19:33.54:0,34,128	0/0:33,0:32:48.58:0,49,195	1/1:0,25:25:75.24:1063,75,0	0/0:33,0:33:16.16:0,16,147	0/0:33,0:33:68.85:0,69,352	0/0:12,0:12:20.77:0,21,67	0/0:27,0:27:31.19:0,31,97	0/0:18,0:18:48.12:0,48,634	0/0:25,0:25:75.25:0,75,1047	0/0:16,0:16:22.09:0,22,97	0/0:33,0:33:41.69:0,42,171	0/0:35,0:35:52.99:0,53,244	0/0:24,0:24:17.07:0,17,81	0/0:15,0:15:20.84:0,21,91	0/0:19,0:19:35.68:0,36,127	0/0:34,0:34:49.97:0,50,159	0/0:26,0:26:29.19:0,29,126	0/0:25,0:25:44.17:0,44,181	0/0:28,0:27:22.96:0,23,100	0/0:24,0:24:49.52:0,50,209	0/0:36,0:35:72.90:0,73,351	0/0:18,0:18:21.58:0,22,88	0/0:4,0:4:7.49:0,7,27
chr10	55288376	.	A	AT	23131.21	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-5.300;DP=703;FS=11.671;HRun=1;HaplotypeScore=77.1928;InbreedingCoeff=0.9833;MQ=77.38;MQ0=0;MQRankSum=-7.875;QD=38.36;ReadPosRankSum=5.523;VQSLOD=4.4736;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,39:41:87.23:1269,87,0	1/1:1,10:11:24.08:355,24,0	0/0:24,0:22:60.10:0,60,697	0/0:31,0:30:81.17:0,81,984	1/1:0,27:27:75.16:1072,75,0	1/1:1,18:19:48.16:719,48,0	1/1:0,33:32:93.32:1392,93,0	1/1:26,0:26:75.24:1063,75,0	1/1:2,31:33:87.29:1302,87,0	1/1:0,32:32:96.27:1391,96,0	1/1:0,12:12:30.10:450,30,0	1/1:1,30:31:66.22:988,66,0	0/0:19,0:19:54.10:0,54,628	0/0:26,0:26:78.24:0,78,996	1/1:0,15:15:42.14:624,42,0	1/1:0,33:33:87.29:1303,87,0	1/1:0,33:33:93.26:1367,93,0	1/1:0,24:24:66.22:988,66,0	1/1:0,15:15:45.13:652,45,0	1/1:4,18:22:54.07:757,54,0	1/1:1,34:35:84.28:1258,84,0	1/1:0,27:27:69.11:980,69,0	1/1:1,24:25:52.09:888,52,0	1/1:0,29:28:75.25:1122,75,0	1/1:0,22:22:57.19:854,57,0	1/1:1,35:35:99:1485,102,0	1/1:0,18:18:48.16:718,48,0	1/1:0,4:4:9.03:135,9,0
chr10	55289031	.	AT	A	1591.66	PASS	AB=0.915;AC=19;AF=0.339;AN=56;BaseQRankSum=5.003;DP=459;FS=2.453;HRun=1;HaplotypeScore=71.1762;InbreedingCoeff=0.7305;MQ=60.54;MQ0=4;MQRankSum=-2.306;QD=8.65;ReadPosRankSum=-0.642;VQSLOD=0.8429;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:31,0:29:43.99:304,44,0	0/0:9,0:9:17.35:0,17,137	0/1:7,1:7:5.43:5,0,116	0/0:4,0:4:11.67:0,12,74	1/1:22,5:26:46.01:368,46,0	0/0:13,1:14:22.42:0,22,120	0/0:18,0:18:7.33:0,7,105	0/0:22,0:22:43.03:0,43,419	0/0:10,0:10:9.86:0,10,70	0/0:22,0:23:46.39:0,46,284	0/0:13,0:13:3.05:0,3,74	1/1:8,0:8:16.72:102,17,0	0/0:19,0:19:47.92:0,48,486	0/0:13,0:13:21.69:0,22,216	0/1:12,0:12:5.94:6,0,68	0/0:15,1:16:2.66:0,3,204	1/1:24,0:24:33.25:188,33,0	1/1:17,2:16:24.91:166,25,0	0/0:23,0:22:29.95:0,30,303	0/0:28,0:28:24.74:0,25,333	0/0:13,0:13:17.18:0,17,118	1/1:17,1:18:35.62:214,36,0	1/1:14,3:17:8.09:286,8,0	1/1:14,0:13:23.64:137,24,0	0/0:14,0:14:21.59:0,22,176	0/0:16,1:17:32.12:0,32,185	0/0:18,1:19:19.25:0,19,146	0/1:5,1:5:2.76:16,0,3
chr10	55289880	.	T	TC	273.79	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.610;DP=604;FS=5.932;HRun=4;HaplotypeScore=63.6055;InbreedingCoeff=0.8491;MQ=83.93;MQ0=0;MQRankSum=1.281;QD=15.21;ReadPosRankSum=-2.773;VQSLOD=2.2332;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,123,1394	0/0:1,0:1:3.01:0,3,34	0/0:25,0:25:55.95:0,56,609	0/0:23,0:23:53.36:0,53,585	0/0:15,0:15:39.10:0,39,432	0/0:28,0:28:75.08:0,75,848	0/0:27,0:27:75.21:0,75,850	1/1:4,14:18:33.01:368,33,0	0/0:20,0:20:48.13:0,48,544	0/0:22,0:22:57.16:0,57,646	0/0:21,0:21:51.14:0,51,578	0/0:25,0:25:72.20:0,72,816	0/0:22,0:22:63.18:0,63,714	0/0:23,0:23:66.19:0,66,748	0/0:24,0:24:69.14:0,69,759	0/0:16,0:16:48.14:0,48,544	0/0:29,0:29:84.19:0,84,928	0/0:29,0:29:64.25:0,64,889	0/0:24,0:24:60.13:0,60,666	0/0:17,0:17:51.15:0,51,577	0/0:29,0:29:75.19:0,75,850	0/0:16,0:16:45.13:0,45,510	0/0:18,0:18:48.14:0,48,543	0/0:14,0:14:42.12:0,42,476	0/0:20,0:20:54.14:0,54,601	0/0:23,0:23:60.17:0,60,676	0/0:21,0:21:54.10:0,54,591	0/0:9,0:9:24.07:0,24,272
chr10	55291509	.	C	CA	10927.10	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-16.550;DP=700;FS=15.275;HRun=7;HaplotypeScore=65.7896;InbreedingCoeff=0.9972;MQ=74.81;MQ0=0;MQRankSum=-3.000;QD=30.19;ReadPosRankSum=0.185;VQSLOD=3.7202;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,123,1187	0/0:5,0:5:15.02:0,15,145	0/0:22,0:22:49.96:0,50,443	0/0:26,0:26:52.19:0,52,468	0/0:21,0:21:60.08:0,60,574	1/1:3,22:25:57.17:687,57,0	1/1:3,16:19:42.13:507,42,0	0/0:29,0:29:68.23:0,68,659	1/1:0,23:23:54.17:652,54,0	1/1:3,35:37:99:1253,105,0	1/1:2,13:15:36.11:435,36,0	0/0:26,0:26:63.06:0,63,601	0/0:25,0:25:66.10:0,66,637	0/0:26,0:26:75.10:0,75,718	1/1:3,36:39:99:1195,99,0	1/1:0,34:34:84.26:1015,84,0	0/0:31,0:31:75.11:0,75,724	0/0:28,0:28:75.12:0,75,724	1/1:3,31:34:93.29:1123,93,0	1/1:4,15:19:45.09:515,45,0	1/1:2,33:35:87.27:1051,87,0	0/0:11,0:11:24.03:0,24,232	0/0:8,0:8:24.04:0,24,232	0/0:37,0:37:90.14:0,90,869	1/1:0,15:15:39.12:467,39,0	1/1:2,19:21:57.17:689,57,0	1/1:1,28:28:75.02:904,75,0	1/1:1,15:16:36.11:435,36,0
chr10	55292427	.	A	AATAAC	37332.06	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-8.576;DP=565;FS=5.690;HRun=0;HaplotypeScore=79.6465;InbreedingCoeff=0.9808;MQ=63.90;MQ0=0;MQRankSum=-5.578;QD=73.06;ReadPosRankSum=0.592;VQSLOD=6.3515;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,17:22:45.15:1357,45,0	1/1:3,6:9:27.05:695,27,0	0/0:15,0:15:33.06:0,33,632	0/0:5,0:5:9.03:0,9,149	1/1:4,25:33:76.78:2192,77,0	1/1:3,27:31:78.18:2281,78,0	1/1:4,15:19:48.12:1404,48,0	1/1:10,22:35:99:2788,99,0	1/1:1,24:26:69.24:2117,69,0	1/1:4,15:21:57.18:1638,57,0	1/1:2,21:24:60.16:1642,60,0	1/1:0,13:14:36.12:1130,36,0	0/0:17,0:17:42.14:0,42,894	0/0:17,0:17:49.98:0,50,1033	1/1:2,19:21:54.15:1597,54,0	1/1:0,18:19:51.18:1588,51,0	1/1:6,15:23:48.16:1485,48,0	1/1:3,17:21:54.19:1704,54,0	1/1:3,10:14:39.09:1087,39,0	1/1:2,20:23:63.22:1740,63,0	1/1:3,16:21:39.13:1196,39,0	1/1:1,10:15:35.99:909,36,0	1/1:4,17:21:60.20:1825,60,0	1/1:1,9:11:18.01:495,18,0	1/1:2,13:15:36.08:1055,36,0	1/1:4,19:24:72.22:2085,72,0	1/1:2,22:24:57.20:1805,57,0	1/1:3,16:21:51.18:1518,51,0
chr10	55292630	.	T	TC	1808.29	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=0.056;DP=355;FS=0.510;HRun=1;HaplotypeScore=57.3019;InbreedingCoeff=0.8083;MQ=48.36;MQ0=14;MQRankSum=0.969;QD=9.13;ReadPosRankSum=0.336;VQSLOD=0.9894;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:18:29.19:0,29,177	0/0:4,0:4:2.94:0,3,18	0/1:6,0:3:6.48:6,0,27	0/0:4,0:3:0.47:0,0,1	0/0:13,0:12:11.75:0,12,76	1/1:12,0:12:27.30:148,27,0	1/1:28,0:27:60.65:338,61,0	0/0:6,0:9:11.90:0,12,83	1/1:9,0:9:21.67:148,22,0	1/1:14,1:15:31.53:231,32,0	1/1:12,0:12:16.32:80,16,0	0/0:7,0:7:13.34:0,13,92	0/0:23,0:22:58.93:0,59,421	0/0:14,0:13:26.66:0,27,210	1/1:15,2:17:33.50:216,33,0	1/1:13,0:12:14.44:143,14,0	0/0:20,0:20:33.07:0,33,202	0/0:8,0:7:7.07:0,7,47	1/1:8,2:7:6.84:108,7,0	1/1:5,12:17:7.72:50,8,0	1/1:6,0:6:10.09:58,10,0	0/0:13,0:12:23.66:0,24,169	0/0:6,0:6:11.87:0,12,82	0/0:12,0:11:14.62:0,15,79	1/1:8,0:8:11.78:65,12,0	1/1:15,0:14:38.13:255,38,0	1/1:16,1:16:9.91:121,10,0	1/1:10,0:9:8.54:51,9,0
chr10	55292701	.	A	ACC	4300.61	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-8.530;DP=422;FS=13.838;HRun=5;HaplotypeScore=56.3223;InbreedingCoeff=0.9829;MQ=72.44;MQ0=6;MQRankSum=-0.653;QD=36.45;ReadPosRankSum=2.845;VQSLOD=3.3120;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,20:24:48.04:824,48,0	0/0:6,0:6:15.05:0,15,191	0/0:12,0:9:18.06:0,18,229	0/0:12,0:11:16.26:0,16,169	1/1:3,13:19:30.06:488,30,0	0/0:17,0:17:45.13:0,45,559	0/0:30,0:30:78.16:0,78,945	0/0:17,0:16:38.48:0,38,466	0/0:15,0:15:45.14:0,45,572	0/0:22,0:22:60.16:0,60,747	0/0:12,0:12:33.10:0,33,412	1/1:2,7:9:15.05:262,15,0	0/0:15,0:15:42.13:0,42,535	0/0:12,0:11:30.10:0,30,381	0/0:18,0:18:54.17:0,54,687	0/0:9,0:9:24.07:0,24,306	1/1:2,22:24:57.20:996,57,0	1/1:0,11:11:33.11:577,33,0	0/0:17,0:16:42.13:0,42,533	0/0:20,0:20:54.17:0,54,685	0/0:10,0:9:24.08:0,24,306	1/1:1,7:8:17.85:315,18,0	1/1:1,7:8:12.04:210,12,0	1/1:0,13:13:36.12:629,36,0	0/0:10,0:10:27.09:0,27,344	0/0:22,0:22:60.17:0,60,741	0/0:15,0:15:39.12:0,39,492	0/0:13,0:12:21.07:0,21,268
chr10	55294116	.	TA	T	9529.28	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=2.701;DP=497;FS=18.559;HRun=8;HaplotypeScore=61.8852;InbreedingCoeff=0.9905;MQ=63.71;MQ0=1;MQRankSum=-1.214;QD=22.69;ReadPosRankSum=4.428;VQSLOD=3.4892;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,27:28:63:589,63,0	0/0:1,0:5:14.38:0,14,73	0/0:19,0:16:37.85:0,38,436	0/0:17,0:12:18.16:0,18,160	1/1:1,13:14:36.05:348,36,0	1/1:3,20:23:57.09:550,57,0	1/1:1,13:14:39.06:376,39,0	1/1:7,11:18:20.07:302,20,0	1/1:0,15:15:42.07:405,42,0	1/1:1,13:14:39.06:377,39,0	1/1:0,16:16:48.08:463,48,0	1/1:1,16:17:39.05:376,39,0	0/0:19,0:19:51.15:0,51,604	0/0:17,0:17:42.12:0,42,496	1/1:0,12:12:27.93:262,28,0	1/1:2,23:25:51.08:493,51,0	1/1:3,33:36:78.12:753,78,0	1/1:0,33:33:81.08:772,81,0	1/1:2,8:10:21.03:201,21,0	1/1:1,13:14:36.06:346,36,0	1/1:6,11:17:24.04:232,24,0	1/1:0,18:18:51.08:492,51,0	1/1:4,12:16:27.04:260,27,0	1/1:2,14:16:30.05:290,30,0	1/1:1,18:18:48.08:463,48,0	1/1:1,17:18:51.06:485,51,0	1/1:0,13:13:39.06:376,39,0	1/1:2,12:14:33.05:319,33,0
chr10	55294208	.	G	GA	5935.95	PASS	AB=0.661;AC=44;AF=0.846;AN=52;BaseQRankSum=-0.998;DP=356;FS=0.000;HRun=7;HaplotypeScore=92.0068;InbreedingCoeff=0.6803;MQ=36.29;MQ0=25;MQRankSum=-1.793;QD=18.55;ReadPosRankSum=-0.947;VQSLOD=4.1438;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:12,16:26:39.12:470,39,0	0/0:9,0:7:18:0,18,173	./.	./.	0/1:9,10:17:7.89:196,0,8	1/1:0,11:11:30.09:362,30,0	1/1:4,5:9:9.03:109,9,0	1/1:9,13:19:38.58:454,39,0	1/1:2,6:8:18.06:217,18,0	1/1:5,7:12:24.07:289,24,0	1/1:7,6:13:30.09:351,30,0	1/1:5,9:13:27.08:318,27,0	0/0:12,0:12:16.81:0,17,165	0/0:12,0:12:17.97:0,18,173	1/1:7,5:10:20.17:225,20,0	1/1:6,6:12:21.02:231,21,0	1/1:8,15:21:35.44:391,35,0	1/1:5,3:6:6.02:72,6,0	0/1:8,8:13:1.95:245,0,2	1/1:10,8:17:21.06:253,21,0	1/1:5,4:7:9.03:108,9,0	1/1:3,9:12:24.07:279,24,0	1/1:6,10:16:27.08:322,27,0	1/1:5,6:8:15.05:181,15,0	1/1:5,6:9:9.03:106,9,0	1/1:6,7:13:21.06:251,21,0	1/1:3,10:12:27.08:326,27,0	1/1:6,3:7:15.05:180,15,0
chr10	55294233	.	AAAAACAAAACAAAAAAAACAAAAAAAAC	A	4601.91	PASS	AB=1.000;AC=25;AF=0.446;AN=56;BaseQRankSum=2.929;DP=453;FS=76.272;HRun=0;HaplotypeScore=304.8646;InbreedingCoeff=0.8398;MQ=34.88;MQ0=32;MQRankSum=-0.082;QD=23.24;ReadPosRankSum=-5.028;VQSLOD=-0.6867;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:26:58.59:0,59,679	0/0:16,0:15:39.04:0,39,1028	0/0:17,0:2:3.01:0,3,197	0/0:26,0:7:20.56:0,21,507	0/0:18,0:18:40.28:0,40,725	1/1:18,0:18:18.93:419,19,0	1/1:9,0:9:8.25:76,8,0	0/0:16,0:14:40.80:0,41,449	1/1:8,0:8:8.04:69,8,0	1/1:10,11:21:25.82:411,26,0	1/1:17,0:17:36.12:802,36,0	0/0:9,0:8:14.13:0,14,199	0/0:17,0:17:48.16:0,48,3949	0/0:9,0:9:27.09:0,27,2513	1/1:10,0:9:15:183,15,0	1/1:10,1:10:13.78:396,14,0	0/0:27,0:27:53.83:0,54,498	0/0:21,0:20:56.95:0,57,676	0/1:24,0:19:3.76:471,0,4	1/1:23,0:21:26.68:400,27,0	0/0:5,0:3:0:0,0,0	0/0:16,0:14:22.97:0,23,241	0/0:17,0:17:35.06:0,35,335	0/0:12,0:9:15.44:0,15,236	1/1:17,1:18:32.59:682,33,0	1/1:11,0:10:4.84:248,5,0	1/1:12,0:12:7.83:104,8,0	1/1:15,0:10:14.95:342,15,0
chr10	55294234	.	AAAACAAAACAAAAAAAACAAAAAAAAC	A	5130.19	PASS	AB=1.000;AC=27;AF=0.482;AN=56;BaseQRankSum=0.102;DP=451;FS=53.868;HRun=0;HaplotypeScore=291.7010;InbreedingCoeff=0.8095;MQ=34.85;MQ0=32;MQRankSum=-0.130;QD=25.65;ReadPosRankSum=-6.107;VQSLOD=1.0761;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:26:45.05:0,45,525	0/0:16,0:15:37.05:0,37,876	0/0:19,0:2:3.01:0,3,185	0/0:26,0:7:20.55:0,21,478	0/0:18,0:18:25.61:0,26,583	1/1:18,0:18:26.30:453,26,0	1/1:9,0:9:4.61:90,5,0	0/0:16,0:14:31.20:0,31,361	1/1:8,0:8:11.95:136,12,0	1/1:21,0:21:26.31:427,26,0	1/1:16,1:17:36.12:856,36,0	0/0:9,0:8:11.13:0,11,139	0/0:17,0:17:48.05:0,48,3759	0/0:9,0:9:27.09:0,27,2403	1/1:10,0:8:15.05:262,15,0	1/1:11,0:10:13.32:344,13,0	0/0:27,0:27:19.12:0,19,362	0/0:21,0:20:55.39:0,55,493	1/1:14,9:18:0.12:557,0,0	1/1:12,11:21:27.43:392,27,0	1/1:5,0:3:2.94:18,3,0	0/0:15,0:13:9.62:0,10,190	0/0:17,0:17:20.71:0,21,236	0/0:12,0:9:15.44:0,15,193	1/1:18,0:18:36.05:742,36,0	1/1:10,0:9:16.30:344,16,0	0/1:12,0:12:6.43:114,0,6	1/1:15,0:10:15.05:395,15,0
chr10	55294235	.	AAAC	A	2538.50	PASS	AB=1.000;AC=46;AF=0.821;AN=56;BaseQRankSum=3.955;DP=449;FS=1.432;HRun=0;HaplotypeScore=117.4266;InbreedingCoeff=0.4284;MQ=34.85;MQ0=32;MQRankSum=-4.161;QD=6.31;ReadPosRankSum=-5.105;VQSLOD=1.0709;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:26:31.60:201,32,0	1/1:16,0:15:13.90:108,14,0	0/0:21,0:2:3.01:0,3,30	0/1:26,0:7:7.11:7,0,23	0/1:18,0:18:15.24:119,0,15	1/1:15,0:15:15.74:151,16,0	0/1:9,0:9:2.39:44,0,2	1/1:16,0:14:26.91:163,27,0	1/1:7,1:8:11.93:101,12,0	0/1:21,0:21:4.34:32,0,4	1/1:16,0:16:27.34:209,27,0	1/1:9,0:8:12.34:55,12,0	0/0:17,0:17:42.05:0,42,497	0/0:9,0:9:27.09:0,27,426	1/1:10,0:8:14.80:97,15,0	1/1:11,0:10:2.86:73,3,0	1/1:27,0:27:40.23:187,40,0	1/1:21,0:20:40.63:209,41,0	1/1:23,0:18:14.62:134,15,0	1/1:23,0:21:12.17:75,12,0	1/1:5,0:3:2.94:18,3,0	1/1:15,0:13:14.30:68,14,0	1/1:17,0:17:14.61:56,15,0	1/1:12,0:9:5.77:32,6,0	1/1:17,1:18:34.77:220,35,0	1/1:10,1:10:20.04:129,20,0	1/1:9,3:12:9.62:92,10,0	1/1:14,0:10:15.35:109,15,0
chr10	55294237	.	AC	A	3066.67	PASS	AB=1.000;AC=49;AF=0.875;AN=56;BaseQRankSum=4.202;DP=384;FS=0.653;HRun=1;HaplotypeScore=92.7100;InbreedingCoeff=0.5268;MQ=38.51;MQ0=30;MQRankSum=-3.146;QD=9.13;ReadPosRankSum=-5.026;VQSLOD=-0.7381;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:23:37.24:226,37,0	1/1:15,1:15:42.81:297,43,0	0/0:20,2:3:3.01:0,3,30	0/1:26,0:7:8.25:8,0,16	1/1:15,1:16:13.55:184,14,0	1/1:9,0:9:17.36:153,17,0	1/1:4,1:5:0.73:58,1,0	1/1:16,1:15:33.67:220,34,0	1/1:5,0:5:11.90:89,12,0	1/1:16,0:16:0.74:36,1,0	1/1:13,0:13:25.15:194,25,0	1/1:7,0:6:11.29:62,11,0	0/0:17,0:17:45.78:0,46,343	0/0:9,0:9:26.30:0,26,234	1/1:7,0:5:14.80:97,15,0	1/1:7,0:6:1.94:61,2,0	1/1:26,0:26:55.16:301,55,0	1/1:21,0:20:47.74:244,48,0	1/1:18,1:15:15.82:120,16,0	1/1:17,1:16:12.63:76,13,0	1/1:3,0:1:2.94:18,3,0	1/1:14,0:12:24.42:135,24,0	1/1:16,0:16:20.54:84,21,0	1/1:10,0:9:8.27:37,8,0	1/1:12,0:12:34.77:220,35,0	1/1:8,0:7:20.05:129,20,0	1/1:9,0:9:2.81:65,3,0	1/1:9,0:5:14.75:96,15,0
chr10	55294242	.	AC	A	2524.92	PASS	AB=0.950;AC=45;AF=0.833;AN=54;BaseQRankSum=4.348;DP=373;FS=6.958;HRun=1;HaplotypeScore=92.2766;InbreedingCoeff=0.5137;MQ=45.81;MQ0=26;MQRankSum=-5.090;QD=8.04;ReadPosRankSum=-3.008;VQSLOD=-0.3506;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:17,5:20:39.90:302,40,0	1/1:16,0:15:41.04:278,41,0	0/0:25,2:4:5.82:0,6,54	0/1:28,3:10:17.17:17,0,60	0/1:14,1:15:8.75:140,0,9	1/1:10,0:10:15.58:80,16,0	1/1:4,1:5:7.50:50,8,0	1/1:16,0:15:33.25:236,33,0	1/1:5,0:5:8.34:42,8,0	1/1:15,0:15:0.47:2,0,0	1/1:15,0:15:20.40:98,20,0	1/1:9,0:8:20.63:151,21,0	0/0:18,0:18:48.49:0,48,563	0/0:10,0:10:29.92:0,30,307	0/1:8,0:6:2.30:20,0,2	1/1:8,0:7:12.36:61,12,0	1/1:17,2:19:29.91:195,30,0	1/1:14,3:16:33.62:242,34,0	1/1:19,0:15:18:104,18,0	1/1:16,1:16:9.48:38,9,0	./.	1/1:7,1:6:7.58:73,8,0	1/1:0,9:9:17.98:165,18,0	1/1:6,2:6:9.96:72,10,0	1/1:14,1:15:30.22:130,30,0	1/1:9,0:8:8.59:48,9,0	1/1:10,0:10:16.61:91,17,0	1/1:8,0:5:10.68:41,11,0
chr10	55294251	.	AC	A	4430.59	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=5.249;DP=364;FS=53.910;HRun=1;HaplotypeScore=87.3159;InbreedingCoeff=0.8812;MQ=56.61;MQ0=16;MQRankSum=-4.317;QD=16.41;ReadPosRankSum=-1.892;VQSLOD=1.5005;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:14,3:15:25.74:220,26,0	1/1:11,0:10:14.34:128,14,0	0/0:29,1:7:8.38:0,8,80	0/0:37,0:15:14.97:0,15,195	1/1:10,1:11:8.91:115,9,0	1/1:6,7:12:35.95:311,36,0	1/1:5,2:6:14.91:119,15,0	1/1:9,0:9:21.19:148,21,0	1/1:2,1:3:9.01:88,9,0	1/1:11,3:14:13.77:95,14,0	1/1:5,10:15:38.92:314,39,0	1/1:5,0:5:14.79:116,15,0	0/0:17,0:17:42.45:0,42,481	0/0:10,0:10:29.99:0,30,304	1/1:5,5:8:22.88:161,23,0	1/1:8,4:11:32.15:250,32,0	1/1:15,2:17:23.45:223,23,0	1/1:13,3:16:33.96:280,34,0	1/1:14,0:11:15.47:116,15,0	1/1:14,4:17:21.61:169,22,0	1/1:3,0:3:6:52,6,0	1/1:6,1:6:15.01:138,15,0	1/1:7,4:11:26.33:223,26,0	1/1:8,1:9:14.69:107,15,0	1/1:7,11:18:50.81:451,51,0	1/1:4,7:9:26.50:211,26,0	1/1:6,3:9:20.96:185,21,0	1/1:5,5:8:23.92:210,24,0
chr10	55294257	.	AAAAC	A	4563.22	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=4.922;DP=375;FS=41.729;HRun=0;HaplotypeScore=106.9294;InbreedingCoeff=0.9202;MQ=59.02;MQ0=12;MQRankSum=-5.237;QD=17.55;ReadPosRankSum=-0.971;VQSLOD=2.5477;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:16:6.64:130,7,0	0/0:8,0:8:18.50:0,18,266	0/0:30,0:8:14.12:0,14,221	0/0:35,0:15:27.57:0,28,522	1/1:12,0:12:23.35:130,23,0	1/1:13,1:13:35.59:347,36,0	1/1:6,0:5:15.01:156,15,0	0/0:11,0:11:26.80:0,27,355	1/1:4,0:4:9.02:109,9,0	1/1:14,0:14:20.14:178,20,0	1/1:15,0:15:37.86:459,38,0	1/1:6,0:6:8.17:40,8,0	0/0:17,0:17:43.69:0,44,1097	0/0:13,0:13:38.97:0,39,748	1/1:9,0:8:23.98:253,24,0	1/1:14,1:14:35.94:327,36,0	1/1:20,0:20:31.61:226,32,0	1/1:15,0:15:32.17:213,32,0	1/1:10,0:9:18.03:189,18,0	1/1:16,1:16:23.20:197,23,0	1/1:6,0:6:8.99:77,9,0	1/1:6,0:5:11.53:64,12,0	1/1:10,0:10:20.37:143,20,0	1/1:10,0:10:14.19:91,14,0	1/1:19,1:20:46.59:534,47,0	1/1:10,1:9:24.86:231,25,0	1/1:11,1:12:26.46:228,26,0	1/1:10,0:8:22.50:240,22,0
chr10	55294258	.	AAAC	A	4627.28	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=4.875;DP=380;FS=30.779;HRun=0;HaplotypeScore=101.7380;InbreedingCoeff=0.9152;MQ=60.40;MQ0=11;MQRankSum=-5.710;QD=17.66;ReadPosRankSum=-0.658;VQSLOD=2.5586;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:16:14.38:148,14,0	0/0:8,0:8:2.21:0,2,194	0/0:29,0:8:14.19:0,14,217	0/0:37,0:16:28.91:0,29,508	1/1:12,0:12:22.95:131,23,0	1/1:12,2:13:37.52:383,38,0	1/1:6,1:6:18.02:173,18,0	0/0:14,0:14:31.18:0,31,365	1/1:3,1:4:10.26:100,10,0	1/1:14,0:14:17.66:148,18,0	1/1:11,4:15:40.08:351,40,0	1/1:6,0:6:11.38:52,11,0	0/0:17,0:17:43.65:0,44,916	0/0:13,0:13:39.04:0,39,659	1/1:8,1:8:23.71:186,24,0	1/1:12,3:14:38.61:322,39,0	1/1:20,0:20:40.78:311,41,0	1/1:15,0:15:31.95:265,32,0	1/1:10,0:9:17.98:163,18,0	1/1:15,2:16:23.81:185,24,0	1/1:6,0:6:11.96:97,12,0	1/1:7,0:6:14.01:95,14,0	1/1:10,0:10:26.66:258,27,0	1/1:10,0:10:16.80:103,17,0	1/1:17,3:20:50.60:503,51,0	1/1:11,0:9:26.68:233,27,0	1/1:11,1:12:23.67:189,24,0	1/1:8,2:8:23.26:230,23,0
chr10	55294259	.	AAC	A	4641.12	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=4.700;DP=383;FS=27.505;HRun=0;HaplotypeScore=95.8007;InbreedingCoeff=0.9277;MQ=60.55;MQ0=10;MQRankSum=-5.269;QD=17.51;ReadPosRankSum=-1.076;VQSLOD=2.9368;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:16:13.96:194,14,0	0/0:9,0:9:2.11:0,2,156	0/0:28,0:8:14.18:0,14,204	0/0:36,0:16:28.11:0,28,417	1/1:12,0:12:24.16:154,24,0	1/1:12,2:13:38.84:317,39,0	1/1:6,1:6:17.74:149,18,0	0/0:14,0:14:28.64:0,29,310	1/1:5,0:5:15.01:138,15,0	1/1:11,3:14:17.38:122,17,0	1/1:12,4:16:42.84:345,43,0	1/1:6,0:6:15.92:117,16,0	0/0:17,0:17:43.79:0,44,742	0/0:13,0:13:39.02:0,39,527	1/1:6,4:9:24.50:171,24,0	1/1:15,0:14:39.49:310,39,0	1/1:19,0:19:40.01:287,40,0	1/1:15,0:15:34.25:273,34,0	1/1:10,0:9:17.92:141,18,0	1/1:17,0:16:23.07:182,23,0	1/1:6,0:6:13.21:100,13,0	1/1:7,0:6:15.76:129,16,0	1/1:10,0:10:29.55:249,30,0	1/1:9,0:9:17.91:146,18,0	1/1:17,4:21:59.56:501,60,0	1/1:7,4:10:28.82:210,29,0	1/1:12,0:12:26.63:189,27,0	1/1:8,2:8:24.01:220,24,0
chr10	55294260	.	AC	A	4666.38	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=4.442;DP=386;FS=21.742;HRun=1;HaplotypeScore=90.8136;InbreedingCoeff=0.9347;MQ=60.62;MQ0=10;MQRankSum=-6.192;QD=17.35;ReadPosRankSum=-1.621;VQSLOD=3.5687;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,1:18:31.23:256,31,0	0/0:9,0:9:1.97:0,2,125	0/0:27,0:8:12.95:0,13,153	0/0:37,0:16:29.79:0,30,358	1/1:12,0:12:24.11:145,24,0	1/1:12,2:13:38.56:282,39,0	1/1:7,0:6:17.57:134,18,0	0/0:14,0:14:28.07:0,28,298	1/1:5,0:5:15:132,15,0	1/1:14,0:14:18.70:117,19,0	1/1:15,1:16:41.05:298,41,0	1/1:6,0:6:17.80:146,18,0	0/0:17,0:17:41.25:0,41,567	0/0:13,0:13:38.18:0,38,401	1/1:10,0:9:22.70:152,23,0	1/1:15,0:14:40.92:301,41,0	1/1:17,2:19:42.96:299,43,0	1/1:14,1:15:33.62:266,34,0	1/1:10,0:9:17.72:133,18,0	1/1:16,1:16:22.83:174,23,0	1/1:7,0:7:17.96:148,18,0	1/1:6,1:6:18.01:166,18,0	1/1:8,2:10:28.90:227,29,0	1/1:9,0:9:17.59:134,18,0	1/1:19,2:21:58.91:471,59,0	1/1:12,0:10:28.20:212,28,0	1/1:13,0:13:34.95:286,35,0	1/1:9,1:8:23.85:187,24,0
chr10	55295045	.	TA	T	4045.37	PASS	AB=0.808;AC=28;AF=0.500;AN=56;BaseQRankSum=-9.485;DP=579;FS=2.631;HRun=13;HaplotypeScore=87.3861;InbreedingCoeff=0.8138;MQ=75.83;MQ0=0;MQRankSum=2.242;QD=13.44;ReadPosRankSum=4.676;VQSLOD=4.1107;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,1:39:74.48:0,74,841	0/0:7,0:7:18.03:0,18,175	0/0:14,0:12:2.74:0,3,19	0/1:15,0:15:2.15:2,0,53	0/0:25,0:28:48.29:0,48,434	1/1:3,12:15:6.61:211,7,0	1/1:3,11:16:33.86:231,34,0	0/0:10,0:27:51.80:0,52,297	1/1:3,13:16:6.61:212,7,0	1/1:6,18:24:38.61:284,39,0	1/1:7,10:17:10.91:216,11,0	0/0:20,0:21:41.88:0,42,385	0/0:14,0:14:36.01:0,36,330	0/0:15,0:15:30.05:0,30,292	1/1:5,20:25:50.68:372,51,0	1/1:3,18:21:53.69:394,54,0	0/0:24,0:24:63.07:0,63,598	0/0:37,0:37:90.09:0,90,852	1/1:8,12:21:11.54:234,12,0	1/1:6,16:23:37.73:268,38,0	1/1:3,8:11:11.91:87,12,0	0/0:14,0:16:41.81:0,42,374	0/0:27,1:28:28.96:0,29,391	0/0:8,0:8:12.02:0,12,117	1/1:2,21:24:61.67:443,62,0	0/1:9,15:24:69:215,0,69	1/1:2,33:35:92.44:679,92,0	1/1:1,13:14:26.85:197,27,0
chr10	55296160	.	GAGAGGC	G	143.55	PASS	AB=1.000;AC=7;AF=0.184;AN=38;BaseQRankSum=2.211;DP=193;FS=2.353;HRun=0;HaplotypeScore=35.5893;InbreedingCoeff=0.4245;MQ=49.79;MQ0=30;MQRankSum=-2.318;QD=4.22;ReadPosRankSum=-3.707;VQSLOD=0.3187;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:11:18.03:0,18,373	./.	0/0:9,0:2:5.93:0,6,61	0/1:11,0:4:0.04:0,0,126	0/0:5,0:4:9.02:0,9,188	./.	0/0:9,0:8:0.94:0,1,2	1/1:3,5:7:14.92:172,15,0	0/1:6,0:4:21.71:54,0,22	1/1:6,0:3:2.97:20,3,0	0/0:1,0:1:0.47:0,0,1	0/0:6,0:6:18:0,18,196	0/0:11,0:9:9:0,9,99	0/0:8,0:6:9.03:0,9,227	./.	0/0:4,0:2:2.60:0,3,10	0/0:13,0:13:21.03:0,21,425	0/0:17,0:15:30.01:0,30,566	./.	0/1:3,0:2:0:0,0,0	./.	0/0:7,0:5:9.01:0,9,149	./.	0/0:14,0:12:15.04:0,15,349	./.	0/0:5,0:5:1.89:0,2,3	./.	./.
chr10	55296166	.	C	CAG	390.28	PASS	AB=0.944;AC=11;AF=0.250;AN=44;BaseQRankSum=4.742;DP=182;FS=7.054;HRun=0;HaplotypeScore=22.0829;InbreedingCoeff=0.4410;MQ=48.98;MQ0=33;MQRankSum=-5.007;QD=11.48;ReadPosRankSum=-2.928;VQSLOD=1.3128;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:8:21.06:0,21,277	./.	0/0:8,0:2:6.01:0,6,66	0/0:10,0:4:8.76:0,9,95	0/0:4,0:3:9.03:0,9,126	./.	1/1:6,1:6:6.02:72,6,0	0/1:10,0:8:30.27:130,0,30	0/1:4,1:3:21.56:80,0,22	0/0:6,0:2:2.99:0,3,24	1/1:1,0:1:3.01:35,3,0	0/0:6,0:6:18.06:0,18,252	0/0:10,0:8:15.05:0,15,210	0/0:8,0:6:18.06:0,18,251	0/0:3,1:4:2.97:0,3,20	1/1:3,0:1:3.01:37,3,0	0/0:11,0:11:30.10:0,30,420	0/0:16,0:14:39.06:0,39,489	./.	0/1:3,0:2:0:0,0,0	./.	0/0:7,0:5:9.03:0,9,126	./.	0/0:14,0:12:24.04:0,24,314	0/0:3,2:5:0:0,0,0	1/1:5,0:5:14.99:164,15,0	0/0:3,0:1:0.89:0,1,2	./.
chr10	55296171	.	GCAGA	G	383.92	PASS	AB=1.000;AC=13;AF=0.310;AN=42;BaseQRankSum=4.746;DP=163;FS=1.653;HRun=0;HaplotypeScore=23.2013;InbreedingCoeff=0.4827;MQ=47.98;MQ0=33;MQRankSum=-4.666;QD=11.63;ReadPosRankSum=-3.437;VQSLOD=1.4502;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:6:18.06:0,18,485	./.	0/0:10,0:2:6.02:0,6,136	0/0:10,0:5:3.20:0,3,173	0/0:4,0:3:9.03:0,9,243	./.	1/1:2,2:3:6.02:110,6,0	0/1:10,0:8:3.06:3,0,140	0/1:5,0:3:52.33:52,0,54	0/0:5,0:1:2.99:0,3,24	1/1:0,1:1:3.01:55,3,0	0/0:6,0:6:18.06:0,18,435	0/0:8,0:6:15.05:0,15,310	0/0:8,0:6:18.05:0,18,374	./.	1/1:3,0:1:3.01:37,3,0	0/0:10,0:10:30.10:0,30,686	0/0:14,0:12:33.11:0,33,828	0/0:14,0:5:6.02:0,6,87	0/1:2,0:1:0:0,0,0	./.	0/0:7,0:5:9.03:0,9,227	./.	0/0:11,0:9:20.86:0,21,504	./.	1/1:1,4:5:14.84:234,15,0	1/1:3,0:1:2.99:24,3,0	./.
chr10	55297961	.	T	TA	805.60	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=0.950;DP=531;FS=5.937;HRun=6;HaplotypeScore=75.2085;InbreedingCoeff=0.6127;MQ=68.01;MQ0=7;MQRankSum=0.721;QD=10.74;ReadPosRankSum=-3.038;VQSLOD=1.1775;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:90.18:0,90,912	0/0:10,0:10:14.69:0,15,171	0/0:41,0:15:21.04:0,21,158	0/1:39,0:12:12.42:12,0,48	0/0:19,0:19:52.29:0,52,504	0/0:16,0:16:45.05:0,45,447	0/0:15,0:15:36.03:0,36,346	1/1:19,17:36:76.73:897,77,0	0/0:12,0:12:27.04:0,27,266	0/0:19,0:19:48.04:0,48,476	0/0:14,0:14:36.07:0,36,363	0/0:14,0:14:38.96:0,39,374	0/0:19,0:19:54.09:0,54,537	0/0:13,0:13:35.98:0,36,338	0/0:8,0:8:20.64:0,21,193	0/0:12,0:12:33.04:0,33,326	0/0:30,0:29:73.43:0,73,705	0/0:21,0:21:47.87:0,48,481	0/0:24,0:24:60.13:0,60,607	0/0:20,0:20:53.80:0,54,475	0/0:5,0:5:9.02:0,9,91	0/0:8,0:8:21.02:0,21,204	0/0:10,0:10:20.83:0,21,194	0/0:8,0:8:20.99:0,21,202	0/0:21,0:21:44.82:0,45,432	0/0:24,0:24:56.86:0,57,551	0/0:26,0:25:71.97:0,72,677	0/0:8,0:8:17.32:0,17,182
chr10	55297972	.	TA	T	633.84	PASS	AB=0.936;AC=13;AF=0.232;AN=56;BaseQRankSum=4.282;DP=508;FS=2.539;HRun=14;HaplotypeScore=77.7950;InbreedingCoeff=0.3296;MQ=67.86;MQ0=8;MQRankSum=-0.919;QD=3.15;ReadPosRankSum=-3.538;VQSLOD=-0.2919;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:32:65.70:0,66,574	1/1:1,6:9:19.08:113,19,0	0/1:38,0:13:6.50:6,0,20	0/1:40,1:15:1.30:1,0,36	0/0:16,1:20:6.12:0,6,174	0/0:17,0:17:35.73:0,36,315	0/0:14,0:14:33.04:0,33,306	1/1:10,21:33:52.97:419,53,0	0/0:13,1:14:6.44:0,6,196	0/0:15,1:18:16.66:0,17,272	0/1:11,2:13:17.21:17,0,128	0/1:13,1:14:19.87:20,0,114	0/0:16,2:20:13.87:0,14,249	0/1:10,1:11:2.55:3,0,121	0/0:10,0:10:7.31:0,7,143	1/1:7,7:14:29.65:202,30,0	0/0:29,0:28:60.77:0,61,523	0/0:16,1:17:29.78:0,30,272	0/0:20,1:22:4.41:0,4,282	0/0:16,0:18:44.72:0,45,390	0/0:5,1:7:8.85:0,9,71	0/0:6,0:7:14.85:0,15,126	0/1:11,1:12:5.32:5,0,182	0/0:9,0:9:20.95:0,21,184	0/1:13,1:15:2.57:3,0,182	0/0:22,0:22:45.01:0,45,408	0/0:22,0:21:52.84:0,53,465	0/0:7,0:8:11.89:0,12,98
chr10	55298042	.	GCTTTGAGCTTTACCT	G	24583.49	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=9.532;DP=369;FS=1.241;HRun=0;HaplotypeScore=184.5870;InbreedingCoeff=0.9103;MQ=77.76;MQ0=0;MQRankSum=-10.918;QD=81.67;ReadPosRankSum=2.902;VQSLOD=4.8468;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,13:17:33.11:1407,33,0	0/0:8,0:8:18.06:0,18,1180	0/0:12,0:12:24.08:0,24,1602	0/0:17,0:17:42.14:0,42,2394	1/1:3,10:13:24.08:965,24,0	1/1:2,11:13:33.11:1445,33,0	1/1:5,16:21:42.14:1801,42,0	1/1:9,5:13:15.02:443,15,0	1/1:4,10:14:27.09:1182,27,0	1/1:1,11:12:30.10:1314,30,0	1/1:0,8:8:18.06:737,18,0	1/1:1,11:12:33.11:1446,33,0	0/0:14,0:14:36.12:0,36,2638	0/0:17,0:17:51.18:0,51,3761	1/1:3,11:14:36.12:1577,36,0	1/1:1,13:14:30.10:1315,30,0	1/1:13,12:25:33.11:1445,33,0	1/1:5,11:16:26.99:1147,27,0	1/1:2,4:6:12.04:399,12,0	1/1:4,16:19:42.14:1798,42,0	1/1:4,4:8:6.02:263,6,0	1/1:1,3:4:9.03:394,9,0	1/1:5,5:10:12.04:525,12,0	1/1:4,6:10:5.77:263,6,0	1/1:3,8:11:24.08:1051,24,0	1/1:1,14:15:36.12:1564,36,0	1/1:6,12:17:36.12:1576,36,0	1/1:1,5:6:12.04:525,12,0
chr10	55298345	.	TTTTTTTTTTG	T	5499.74	PASS	AB=0.992;AC=23;AF=0.411;AN=56;BaseQRankSum=6.610;DP=443;FS=43.849;HRun=0;HaplotypeScore=153.3964;InbreedingCoeff=0.4515;MQ=55.02;MQ0=14;MQRankSum=-5.672;QD=21.23;ReadPosRankSum=7.582;VQSLOD=2.3868;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:24.45:0,24,382	0/0:9,0:9:24.03:0,24,595	0/0:12,0:5:14.88:0,15,275	0/0:11,0:7:12.77:0,13,221	0/0:13,0:12:35.11:0,35,509	0/1:12,0:12:22.61:246,0,23	0/1:15,0:14:8.32:166,0,8	1/1:30,1:28:37.61:595,38,0	0/1:11,0:11:33.15:323,0,33	1/1:15,0:15:4.21:271,4,0	0/1:18,0:18:99:270,0,126	0/0:7,0:7:18.03:0,18,304	0/0:21,0:21:54.17:0,54,1658	0/0:13,0:12:27.09:0,27,853	1/1:16,0:16:25.84:387,26,0	1/1:12,1:13:27.09:454,27,0	0/0:16,0:13:33.08:0,33,546	0/0:18,0:16:26.77:0,27,417	0/1:16,1:17:87.94:356,0,88	0/1:17,0:17:41.34:222,0,41	1/1:20,0:20:1.46:214,1,0	0/0:18,0:18:51.16:0,51,827	0/0:19,0:18:39.08:0,39,431	0/0:12,0:12:11.47:0,11,353	1/1:13,0:13:19.91:265,20,0	1/1:19,1:20:50.82:750,51,0	1/1:30,0:30:40.59:743,41,0	0/1:11,0:11:3.25:238,0,3
chr10	55298346	.	TTTTTTTTTG	T	9411.65	PASS	AB=0.719;AC=28;AF=0.500;AN=56;BaseQRankSum=1.659;DP=433;FS=41.744;HRun=0;HaplotypeScore=130.2230;InbreedingCoeff=0.6977;MQ=54.88;MQ0=14;MQRankSum=-6.033;QD=35.92;ReadPosRankSum=5.925;VQSLOD=2.5889;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:21.30:0,21,274	0/0:9,0:9:24.03:0,24,507	0/0:12,0:5:14.88:0,15,245	0/0:11,0:7:17.75:0,18,217	0/0:13,0:12:18.79:0,19,365	0/1:2,9:11:3.70:441,0,4	1/1:1,13:13:12.04:309,12,0	1/1:5,25:27:64.09:956,64,0	0/1:4,7:11:27.63:574,0,28	1/1:1,14:15:21.86:470,22,0	0/1:12,8:20:22.44:545,0,22	0/0:7,0:7:18.05:0,18,287	0/0:21,0:21:54.16:0,54,1469	0/0:13,0:12:27.08:0,27,749	1/1:1,15:16:25.86:674,26,0	1/1:1,12:13:27.09:685,27,0	0/0:15,0:12:29.96:0,30,378	0/0:18,0:16:22.54:0,23,307	1/1:4,13:17:0.92:572,1,0	1/1:1,14:15:13.19:468,13,0	1/1:3,15:18:19.68:409,20,0	0/0:18,0:18:50.90:0,51,609	0/0:19,0:18:27.45:0,27,261	0/1:11,0:11:7.43:7,0,206	1/1:0,13:13:24.01:508,24,0	1/1:1,18:19:51.04:1141,51,0	1/1:2,28:30:50.09:1221,50,0	1/1:1,8:9:18.06:433,18,0
chr10	55298349	.	TTTTTTG	T	5974.16	PASS	AB=0.954;AC=37;AF=0.661;AN=56;BaseQRankSum=7.246;DP=422;FS=41.263;HRun=0;HaplotypeScore=119.1533;InbreedingCoeff=0.2879;MQ=54.33;MQ0=18;MQRankSum=-6.238;QD=16.83;ReadPosRankSum=6.376;VQSLOD=2.5671;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:15,0:15:56.31:56,0,82	0/0:12,0:12:29.73:0,30,266	0/0:12,0:4:11.54:0,12,129	0/0:10,0:7:14.22:0,14,107	0/1:12,0:11:72.42:72,0,85	1/1:10,0:10:18.06:255,18,0	1/1:14,0:13:12.04:169,12,0	1/1:29,0:26:71.14:654,71,0	1/1:11,0:11:0.66:301,1,0	1/1:15,0:14:20.43:262,20,0	1/1:17,0:17:10:337,10,0	0/1:6,0:6:3.07:3,0,96	0/0:21,0:21:54.10:0,54,932	0/0:12,0:11:24.07:0,24,475	1/1:16,0:16:25.92:359,26,0	1/1:13,0:13:27.09:386,27,0	0/1:12,0:9:55.29:55,0,81	0/1:10,8:16:71.89:72,0,95	0/1:17,0:17:3.23:344,0,3	1/1:15,0:15:20.12:227,20,0	1/1:17,0:17:20.81:238,21,0	0/1:18,0:18:73.59:125,0,74	0/1:15,2:16:10.81:162,0,11	0/1:11,0:11:22.97:41,0,23	1/1:13,0:13:23.98:263,24,0	1/1:19,0:19:51.51:668,52,0	1/1:31,0:30:47.18:665,47,0	1/1:9,0:9:18.06:260,18,0
chr10	55298350	.	TTTTTG	T	5874.23	PASS	AB=0.872;AC=41;AF=0.732;AN=56;BaseQRankSum=6.482;DP=417;FS=36.064;HRun=0;HaplotypeScore=112.4114;InbreedingCoeff=0.3031;MQ=51.55;MQ0=19;MQRankSum=-6.069;QD=16.32;ReadPosRankSum=5.210;VQSLOD=2.7875;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:4,11:15:12.63:145,0,13	0/0:12,0:12:17.49:0,17,168	0/0:12,0:4:8.99:0,9,97	0/1:8,0:5:20.51:21,0,59	0/1:11,2:12:22.28:135,0,22	1/1:10,0:10:18.05:220,18,0	1/1:14,0:13:12.04:145,12,0	1/1:29,0:26:71.11:602,71,0	1/1:11,0:11:0.53:252,1,0	1/1:15,0:14:20.36:233,20,0	1/1:16,0:16:12.15:301,12,0	0/1:7,0:7:37.84:38,0,59	0/0:21,0:21:51.10:0,51,708	0/0:12,0:11:24.05:0,24,385	1/1:16,0:16:25.96:307,26,0	1/1:13,0:13:27.08:334,27,0	0/1:12,0:9:19.85:90,0,20	0/1:17,1:16:3.93:128,0,4	1/1:16,0:16:13.76:317,14,0	1/1:14,0:14:19:186,19,0	1/1:17,0:17:20.74:206,21,0	0/1:9,6:15:50.41:288,0,50	1/1:9,7:15:2.39:180,2,0	1/1:12,0:12:19.61:141,20,0	1/1:13,0:13:23.87:222,24,0	1/1:19,0:19:51:586,51,0	1/1:31,0:30:46.88:572,47,0	1/1:9,0:9:18.06:225,18,0
chr10	55298351	.	TTTTGG	T	3836.72	PASS	AB=1.000;AC=46;AF=0.821;AN=56;BaseQRankSum=7.289;DP=408;FS=3.451;HRun=0;HaplotypeScore=118.3068;InbreedingCoeff=0.6051;MQ=48.39;MQ0=20;MQRankSum=-5.037;QD=10.84;ReadPosRankSum=3.946;VQSLOD=2.7569;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:14:6.66:114,7,0	0/0:12,0:12:26.23:0,26,247	0/0:11,0:3:5.02:0,5,28	0/1:9,0:4:17.82:18,0,32	1/1:12,0:11:9.57:98,10,0	1/1:10,0:10:17.99:162,18,0	1/1:14,0:13:11.91:97,12,0	1/1:29,0:26:36.21:204,36,0	1/1:11,0:11:24.27:204,24,0	1/1:15,0:14:13.11:125,13,0	1/1:15,0:15:28.72:184,29,0	1/1:7,0:7:2.43:49,2,0	0/0:20,0:20:43.90:0,44,515	0/0:11,0:10:19.79:0,20,290	1/1:16,0:16:27.10:211,27,0	1/1:13,0:13:26.83:222,27,0	0/1:13,0:10:32.04:77,0,32	1/1:15,0:13:8.73:109,9,0	1/1:16,0:16:8.57:147,9,0	1/1:14,0:14:15.54:103,16,0	1/1:17,0:17:17.59:120,18,0	1/1:11,3:15:24.20:314,24,0	1/1:14,2:15:16.96:209,17,0	1/1:11,0:11:7.41:69,7,0	1/1:13,0:13:19.61:122,20,0	1/1:19,0:19:41.57:332,42,0	1/1:31,0:30:44.40:410,44,0	1/1:9,0:9:17.83:138,18,0
chr10	55298354	.	TGGTTC	T	1559.45	PASS	AB=0.934;AC=34;AF=0.607;AN=56;BaseQRankSum=8.540;DP=376;FS=28.513;HRun=0;HaplotypeScore=119.1059;InbreedingCoeff=0.0790;MQ=49.15;MQ0=21;MQRankSum=-7.505;QD=5.20;ReadPosRankSum=7.913;VQSLOD=-0.0948;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:12,0:12:5.92:78,0,6	0/0:10,0:10:24.06:0,24,385	0/0:9,0:3:2.70:0,3,7	0/1:8,0:4:11.99:12,0,25	0/1:8,0:8:43.25:43,0,61	1/1:10,0:10:15.44:79,15,0	1/1:13,0:13:9.55:36,10,0	0/0:29,0:26:11.11:0,11,203	1/1:9,0:10:20.32:84,20,0	0/1:15,0:14:43.56:47,0,44	0/1:14,0:14:27.97:92,0,28	0/1:1,2:3:9.87:43,0,10	0/0:16,0:17:28.33:0,28,467	0/0:10,0:10:5.84:0,6,233	1/1:15,0:15:19.66:79,20,0	1/1:13,0:13:18.85:75,19,0	0/1:9,2:8:73.12:73,0,93	1/1:11,1:10:8.31:74,8,0	0/1:15,0:15:26.29:26,0,43	1/1:14,0:14:10.47:49,10,0	0/1:16,0:17:1.39:44,0,1	1/1:11,0:11:8.25:235,8,0	1/1:12,2:13:17.78:205,18,0	0/1:10,0:11:41.83:42,0,142	0/1:13,0:13:2.54:33,0,3	0/1:19,0:19:22.46:64,0,22	1/1:31,0:30:38.63:184,39,0	1/1:9,0:9:11.70:37,12,0
chr10	55298492	.	CCGTG	C	19485.08	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=5.375;DP=484;FS=11.986;HRun=0;HaplotypeScore=99.1233;InbreedingCoeff=0.9960;MQ=58.60;MQ0=1;MQRankSum=-3.458;QD=50.61;ReadPosRankSum=5.335;VQSLOD=5.5001;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,24:24:57.20:1193,57,0	0/0:11,0:11:33.11:0,33,952	0/0:25,0:20:51.12:0,51,1375	0/0:27,0:24:65.85:0,66,1471	1/1:0,16:16:48.08:960,48,0	1/1:0,19:19:45.09:896,45,0	1/1:0,11:11:24.08:503,24,0	1/1:0,11:11:27.05:517,27,0	1/1:0,18:18:45.15:942,45,0	1/1:0,16:16:48.16:957,48,0	1/1:0,16:16:45.15:940,45,0	1/1:1,17:18:42.14:864,42,0	0/0:17,0:17:51.17:0,51,1409	0/0:19,0:19:57.20:0,57,1592	1/1:0,26:26:60.21:1254,60,0	1/1:0,17:17:33.11:691,33,0	1/1:0,22:22:47.88:1005,48,0	1/1:0,15:15:33.11:689,33,0	1/1:1,16:17:44.77:808,45,0	1/1:0,13:13:30.10:628,30,0	1/1:0,20:19:45.15:942,45,0	1/1:0,10:10:24.08:502,24,0	1/1:0,10:10:17.99:374,18,0	1/1:0,13:13:30.10:628,30,0	1/1:1,18:19:51.04:969,51,0	1/1:0,16:16:48.15:962,48,0	1/1:0,29:29:84.29:1756,84,0	1/1:0,9:9:24.08:502,24,0
chr10	55298571	.	ACATACTAT	A	1566.73	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.948;DP=512;FS=15.747;HRun=0;HaplotypeScore=148.8205;InbreedingCoeff=0.9803;MQ=76.68;MQ0=1;MQRankSum=-4.407;QD=74.61;ReadPosRankSum=-2.440;VQSLOD=2.5176;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:57.20:0,57,2496	0/0:11,0:11:33.11:0,33,1528	0/0:12,0:12:30.16:0,30,957	0/0:15,0:14:14.88:0,15,1149	0/0:19,0:19:57.20:0,57,2372	0/0:30,0:29:84.29:0,84,3681	0/0:17,0:17:48.16:0,48,2048	1/1:0,21:20:60.20:1662,60,0	0/0:14,0:14:39.13:0,39,1758	0/0:23,0:23:69.24:0,69,3115	0/0:17,0:17:51.16:0,51,2063	0/0:16,0:16:45.15:0,45,1796	0/0:19,0:19:54.18:0,54,2333	0/0:17,0:17:48.16:0,48,2022	0/0:18,0:18:48.16:0,48,2022	0/0:19,0:19:45.15:0,45,2083	0/0:24,0:24:69.24:0,69,3090	0/0:12,0:12:33.08:0,33,1256	0/0:14,0:14:42.14:0,42,1745	0/0:33,0:33:96.33:0,96,4229	0/0:17,0:17:51.17:0,51,2164	0/0:19,0:19:54.19:0,54,2344	0/0:19,0:19:51.13:0,51,2134	0/0:14,0:14:42.14:0,42,1892	0/0:8,0:8:24.08:0,24,990	0/0:29,0:29:87.30:0,87,3904	0/0:22,0:22:63.21:0,63,2619	0/0:11,0:11:30.10:0,30,1313
chr10	55299207	.	AC	A	180.45	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.977;DP=619;FS=5.515;HRun=2;HaplotypeScore=54.9530;InbreedingCoeff=0.9957;MQ=83.48;MQ0=0;MQRankSum=-1.386;QD=20.05;ReadPosRankSum=0.015;VQSLOD=3.3779;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,123,1842	1/1:0,9:9:21.07:273,21,0	0/0:21,0:21:60.20:0,60,883	0/0:17,0:17:47.51:0,48,629	0/0:20,0:20:60.20:0,60,899	0/0:18,0:18:54.18:0,54,807	0/0:14,0:14:42.13:0,42,610	0/0:26,0:26:75.24:0,75,1090	0/0:18,0:18:51.15:0,51,725	0/0:32,0:32:96.32:0,96,1422	0/0:16,0:16:48.15:0,48,699	0/0:27,0:27:81.26:0,81,1183	0/0:21,0:21:63.21:0,63,930	0/0:25,0:25:75.25:0,75,1124	0/0:24,0:24:72.24:0,72,1079	0/0:18,0:18:51.17:0,51,762	0/0:35,0:35:99:0,102,1522	0/0:27,0:27:72.16:0,72,1008	0/0:19,0:19:53.99:0,54,741	0/0:23,0:23:69.22:0,69,1015	0/0:25,0:25:75.23:0,75,1084	0/0:15,0:15:45.15:0,45,674	0/0:27,0:27:67.66:0,68,1113	0/0:22,0:22:66.22:0,66,988	0/0:25,0:25:69.23:0,69,1034	0/0:27,0:27:78.26:0,78,1151	0/0:14,0:14:42.14:0,42,629	0/0:12,0:12:36.12:0,36,539
chr10	55299711	.	G	GT	2187.10	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=0.233;DP=488;FS=7.185;HRun=1;HaplotypeScore=112.4808;InbreedingCoeff=0.9540;MQ=72.03;MQ0=6;MQRankSum=0.871;QD=11.89;ReadPosRankSum=0.523;VQSLOD=1.8469;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:34,0:33:71.20:439,71,0	0/0:7,0:7:20.24:0,20,181	0/0:48,0:17:20.21:0,20,231	0/0:56,0:29:9.56:0,10,281	1/1:21,0:21:45.37:275,45,0	0/0:13,0:14:35.91:0,36,292	0/0:20,0:21:56.72:0,57,442	1/1:7,11:17:31.26:220,31,0	0/0:12,0:14:35.88:0,36,283	0/0:14,0:14:38.66:0,39,315	0/0:15,0:16:43.09:0,43,322	1/1:21,0:21:55.97:308,56,0	0/0:5,0:5:8.75:0,9,54	0/0:7,0:9:23.78:0,24,184	0/0:13,0:13:32.90:0,33,268	0/0:16,0:16:38.81:0,39,338	1/1:27,0:27:64.33:375,64,0	1/1:19,0:19:39.20:235,39,0	0/0:11,0:11:33:0,33,297	0/0:8,0:8:20.62:0,21,150	0/0:11,0:11:20.94:0,21,174	1/1:13,0:13:4.72:131,5,0	1/1:13,0:13:31.71:174,32,0	1/1:18,0:18:33.03:240,33,0	0/0:9,0:10:29.88:0,30,233	0/0:15,0:15:40.64:0,41,326	0/0:7,0:8:14.75:0,15,105	0/0:5,0:7:17.94:0,18,142
chr10	55299723	.	CCCT	C	4018.51	PASS	AB=1.000;AC=27;AF=0.482;AN=56;BaseQRankSum=1.503;DP=513;FS=24.897;HRun=0;HaplotypeScore=107.3572;InbreedingCoeff=0.1816;MQ=65.94;MQ0=12;MQRankSum=-2.993;QD=13.40;ReadPosRankSum=6.072;VQSLOD=1.6563;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,29:30:39.05:550,39,0	0/0:7,0:7:11.57:0,12,120	0/0:66,0:19:45.31:0,45,517	0/0:67,0:25:33.38:0,33,442	1/1:4,11:16:32.21:373,32,0	0/1:12,0:12:43.90:44,0,49	0/1:18,0:18:16.46:73,0,16	0/0:21,0:20:50.99:0,51,401	0/1:15,0:15:19.85:20,0,64	0/1:12,0:12:19.52:20,0,96	0/1:13,0:13:31.26:68,0,31	1/1:2,18:20:28.61:667,29,0	0/0:5,0:5:8.97:0,9,75	0/1:5,0:5:12.92:13,0,51	0/1:14,0:14:35.52:36,0,81	0/0:11,0:11:21.14:0,21,239	1/1:2,26:28:57.13:826,57,0	1/1:3,17:20:33.58:521,34,0	0/1:15,0:15:2.69:3,0,148	0/0:14,0:14:1.81:0,2,120	0/0:11,0:11:8.25:0,8,61	1/1:0,10:11:21.05:279,21,0	1/1:2,10:12:10.43:254,10,0	1/1:2,18:20:13.34:202,13,0	0/1:15,0:15:29.40:29,0,102	0/1:18,0:18:33.73:34,0,134	0/0:11,0:11:5.85:0,6,110	0/1:6,0:6:7.06:7,0,39
chr10	55301348	.	TTAAAAAAAAAAAAA	T	1627.62	PASS	AB=0.821;AC=26;AF=0.464;AN=56;BaseQRankSum=1.212;DP=431;FS=0.000;HRun=0;HaplotypeScore=102.6722;InbreedingCoeff=0.7227;MQ=57.83;MQ0=65;MQRankSum=1.801;QD=11.22;ReadPosRankSum=2.764;VQSLOD=1.8103;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:14:37.26:0,37,261	0/1:12,0:9:99:115,0,118	0/0:64,0:17:25.04:0,25,576	0/0:82,0:16:18.76:0,19,342	0/0:10,0:9:17.44:0,17,136	1/1:2,0:2:5.99:49,6,0	1/1:6,0:5:14.91:115,15,0	0/0:24,0:21:51.21:0,51,411	1/1:5,0:5:14:102,14,0	1/1:17,0:16:41.12:354,41,0	1/1:7,0:6:0.16:69,0,0	0/0:9,0:8:19.69:0,20,151	0/0:4,0:4:12:0,12,255	0/0:7,0:6:17.99:0,18,409	1/1:10,0:10:4.09:143,4,0	0/0:7,0:6:17.05:0,17,154	0/0:19,0:19:38.85:0,39,306	0/0:18,0:18:53.47:0,53,741	1/1:9,0:7:20.56:134,21,0	1/1:7,0:5:14.94:122,15,0	1/1:4,0:3:8.99:74,9,0	0/0:3,0:3:2.96:0,3,19	0/0:7,0:6:16.93:0,17,124	0/0:16,0:15:29.94:0,30,248	1/1:6,0:3:9:78,9,0	0/1:4,5:8:35.97:107,0,36	1/1:12,0:12:27.93:223,28,0	1/1:39,0:13:13.66:150,14,0
chr10	55301387	.	AG	A	5635.18	PASS	AB=0.959;AC=51;AF=0.944;AN=54;BaseQRankSum=-4.318;DP=462;FS=5.777;HRun=2;HaplotypeScore=38.3198;InbreedingCoeff=-0.0733;MQ=63.06;MQ0=59;MQRankSum=-1.914;QD=12.30;ReadPosRankSum=-0.021;VQSLOD=3.0631;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:20:47.16:342,47,0	1/1:8,0:5:5.74:30,6,0	0/1:44,2:12:31.26:76,0,31	0/1:51,5:12:22.76:116,0,23	1/1:21,0:18:47.75:374,48,0	1/1:8,0:5:14.91:114,15,0	1/1:7,0:5:11.99:100,12,0	1/1:3,22:23:52.95:394,53,0	1/1:9,0:8:20.97:174,21,0	1/1:20,0:16:44.02:330,44,0	./.	1/1:15,0:12:26.97:226,27,0	1/1:9,0:4:6:51,6,0	1/1:4,0:4:8.98:73,9,0	1/1:18,0:16:35.85:289,36,0	1/1:7,0:4:11.85:86,12,0	1/1:13,0:11:26.94:218,27,0	1/1:19,0:17:44.68:350,45,0	1/1:24,0:19:53.90:460,54,0	1/1:1,9:10:14.81:99,15,0	1/1:7,0:7:20.95:169,21,0	1/1:8,0:8:17.80:127,18,0	1/1:13,0:11:26.88:217,27,0	1/1:13,0:9:20.98:175,21,0	1/1:7,0:4:8.88:63,9,0	1/1:21,0:20:50.93:434,51,0	1/1:22,0:22:53.85:430,54,0	0/1:23,0:10:7.34:118,0,7
chr10	55301740	.	T	TG	971.91	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-7.397;DP=661;FS=3.651;HRun=4;HaplotypeScore=66.7683;InbreedingCoeff=0.9697;MQ=83.17;MQ0=0;MQRankSum=-2.382;QD=33.51;ReadPosRankSum=-3.815;VQSLOD=2.6101;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:48:99:0,114,1213	0/0:5,0:5:12.03:0,12,136	0/0:20,0:20:40.82:0,41,401	0/0:18,0:18:42.60:0,43,466	0/0:31,0:31:72.20:0,72,812	0/0:24,0:24:72.18:0,72,804	0/0:29,0:29:81.20:0,81,898	1/1:2,27:29:78.26:1067,78,0	0/0:14,0:14:39.10:0,39,432	0/0:31,0:31:90.26:0,90,1021	0/0:18,0:18:33.09:0,33,373	0/0:30,0:30:84.22:0,84,942	0/0:22,0:22:66.19:0,66,748	0/0:25,0:25:69.20:0,69,783	0/0:24,0:24:69.16:0,69,764	0/0:28,0:28:84.22:0,84,943	0/0:28,0:28:81.23:0,81,918	0/0:23,0:23:66.16:0,66,736	0/0:21,0:21:51.14:0,51,579	0/0:18,0:18:45.13:0,45,510	0/0:33,0:33:93.25:0,93,1045	0/0:18,0:18:39.11:0,39,442	0/0:23,0:23:60.17:0,60,681	0/0:24,0:24:66.19:0,66,749	0/0:13,0:13:36.10:0,36,408	0/0:17,0:17:45.12:0,45,502	0/0:32,0:32:96.27:0,96,1089	0/0:14,0:14:42.09:0,42,464
chr10	55304522	.	T	TA	4874.19	PASS	AB=0.597;AC=26;AF=0.464;AN=56;BaseQRankSum=-8.326;DP=479;FS=0.461;HRun=12;HaplotypeScore=72.2935;InbreedingCoeff=0.7066;MQ=69.27;MQ0=0;MQRankSum=2.586;QD=15.83;ReadPosRankSum=-0.635;VQSLOD=5.4915;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:19.88:0,20,137	1/1:9,0:9:14.20:73,14,0	0/0:11,0:11:4.29:0,4,18	0/0:12,0:12:11.13:0,11,71	0/0:17,0:16:26.82:0,27,195	1/1:2,18:21:50.92:481,51,0	0/1:5,21:26:8.63:410,0,9	1/1:19,0:19:14.24:71,14,0	1/1:4,16:20:39.05:375,39,0	1/1:9,8:17:24.92:231,25,0	1/1:3,21:24:32.60:465,33,0	0/0:5,0:5:2.98:0,3,22	0/0:11,0:12:31.86:0,32,225	0/0:12,0:14:28.84:0,29,203	1/1:8,20:28:48.51:459,49,0	0/0:5,0:22:35.55:0,36,116	0/0:15,0:15:23.80:0,24,175	0/0:8,0:8:11.88:0,12,85	0/1:8,17:25:8.64:410,0,9	0/1:10,17:27:1.74:308,0,2	0/1:5,9:15:7.73:126,0,8	0/0:17,0:16:28.84:0,29,203	0/0:15,0:14:23.84:0,24,175	0/0:7,0:8:14.90:0,15,109	1/1:3,18:21:17.18:328,17,0	1/1:4,24:28:61.30:573,61,0	1/1:2,16:20:38.90:364,39,0	1/1:1,7:8:21.02:199,21,0
chr10	55304534	.	A	AAAAT	608.41	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-2.202;DP=412;FS=10.293;HRun=0;HaplotypeScore=94.7237;InbreedingCoeff=0.8732;MQ=62.18;MQ0=1;MQRankSum=-0.359;QD=23.40;ReadPosRankSum=-4.926;VQSLOD=1.5570;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:9:14.71:0,15,339	1/1:3,0:10:21.28:167,21,0	0/0:9,0:8:20.56:0,21,171	0/0:7,0:7:14.09:0,14,223	0/0:16,0:15:41.74:0,42,515	0/0:21,0:21:45.52:0,46,251	0/0:23,0:23:57.63:0,58,410	1/1:1,9:16:42.02:561,42,0	0/0:14,0:14:34.19:0,34,184	0/0:14,0:14:30.56:0,31,207	0/0:26,0:26:60.25:0,60,396	0/0:2,0:2:3.01:0,3,50	0/0:11,0:11:33.11:0,33,542	0/0:13,0:13:31.86:0,32,500	0/0:24,0:24:34.08:0,34,269	0/0:19,0:19:53.80:0,54,627	0/0:12,0:12:24.65:0,25,391	0/0:6,0:6:14.99:0,15,196	0/0:25,0:25:72.87:0,73,543	0/0:19,0:19:52.30:0,52,365	0/0:12,0:12:20.34:0,20,162	0/0:15,0:14:38.94:0,39,539	0/0:11,0:10:27.01:0,27,423	0/0:6,0:6:15.02:0,15,255	0/0:20,0:20:37.23:0,37,231	0/0:27,0:27:69.74:0,70,416	0/0:17,0:17:31.20:0,31,179	0/0:7,0:7:15.67:0,16,89
chr10	55304612	.	T	TGG	592.92	PASS	AB=0.888;AC=15;AF=0.278;AN=54;BaseQRankSum=-2.327;DP=431;FS=56.231;HRun=0;HaplotypeScore=87.5906;InbreedingCoeff=-0.2385;MQ=29.70;MQ0=25;MQRankSum=0.719;QD=2.65;ReadPosRankSum=-0.227;VQSLOD=-0.3633;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:16:23.84:0,24,243	0/1:12,0:12:3.46:3,0,265	1/1:12,0:1:2.22:7,2,0	./.	0/0:22,0:22:57.27:0,57,517	0/1:14,1:14:68.78:69,0,308	0/1:14,4:17:4.26:4,0,203	0/0:19,0:16:34.03:0,34,386	0/1:11,3:13:23.97:24,0,138	0/1:12,2:12:99:121,0,143	0/1:11,0:10:25.53:26,0,147	0/0:14,0:12:29.95:0,30,292	0/0:13,0:11:33.07:0,33,397	0/0:10,0:9:24.08:0,24,313	0/1:18,2:20:25.34:25,0,314	0/0:12,0:10:17.96:0,18,182	0/0:21,0:21:39.11:0,39,423	0/0:12,0:9:6.89:0,7,171	0/1:12,2:12:73.34:73,0,250	0/1:22,2:22:99:145,0,248	0/1:9,2:7:15.50:15,0,37	0/0:19,0:19:42.65:0,43,401	0/0:22,0:20:28.54:0,29,465	0/0:7,0:5:6.49:0,6,74	0/1:15,3:17:71.49:71,0,234	0/1:13,3:13:99:152,0,152	0/1:20,3:24:2.97:3,0,268	0/0:8,0:7:17.69:0,18,179
chr10	55304615	.	TTTTTG	T	259.97	PASS	AB=0.971;AC=13;AF=0.241;AN=54;BaseQRankSum=10.427;DP=402;FS=12.850;HRun=0;HaplotypeScore=95.4405;InbreedingCoeff=-0.1217;MQ=28.83;MQ0=18;MQRankSum=0.032;QD=1.47;ReadPosRankSum=7.521;VQSLOD=0.1213;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:13,1:13:43.63:44,0,52	0/1:12,0:12:46.63:47,0,70	1/1:10,0:1:0.89:2,1,0	./.	0/0:21,0:20:22.29:0,22,153	0/0:15,0:14:18.33:0,18,179	0/0:19,0:18:4.23:0,4,136	0/0:17,0:14:37.43:0,37,294	0/1:12,0:12:26.46:26,0,42	0/0:12,0:11:14.81:0,15,129	0/0:13,0:12:13.03:0,13,146	0/0:13,0:12:0.83:0,1,66	0/0:13,0:12:34.14:0,34,402	0/0:10,0:9:23.99:0,24,310	0/0:19,0:19:12.27:0,12,198	0/0:12,0:10:19.49:0,19,266	0/1:18,2:20:38.51:123,0,39	1/1:11,0:9:2.40:16,2,0	0/0:12,0:11:10.61:0,11,113	0/1:22,0:20:13.75:14,0,91	0/0:10,0:6:7.04:0,7,33	0/1:15,2:16:51.62:52,0,86	0/1:19,0:17:2.29:2,0,143	0/0:8,0:5:0.12:0,0,12	0/0:17,0:16:30.59:0,31,179	0/1:16,0:13:13.01:13,0,79	0/1:23,0:22:56.40:56,0,129	0/0:8,0:7:0.54:0,1,54
chr10	55304619	.	TGGGTC	T	2023.73	PASS	AB=0.896;AC=22;AF=0.407;AN=54;BaseQRankSum=3.694;DP=313;FS=42.064;HRun=0;HaplotypeScore=78.3497;InbreedingCoeff=0.0313;MQ=29.82;MQ0=7;MQRankSum=0.656;QD=9.64;ReadPosRankSum=-0.276;VQSLOD=0.1933;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,5:8:12.87:193,13,0	0/0:11,0:11:2.46:0,2,136	0/0:6,0:1:0:0,0,0	./.	0/1:12,3:13:41.88:141,0,42	0/0:14,0:13:6.73:0,7,293	0/0:15,0:14:18.58:0,19,217	0/0:11,0:10:30:0,30,304	0/1:8,1:9:84.44:120,0,84	0/0:8,0:7:15.19:0,15,118	0/1:15,0:14:13.66:14,0,231	1/1:5,4:8:2.84:154,3,0	0/1:11,0:12:0.16:0,0,359	0/0:9,0:9:17.15:0,17,244	0/1:15,1:16:34.39:34,0,251	0/1:7,0:9:52.35:52,0,259	1/1:4,7:16:35.11:599,35,0	1/1:2,5:6:12.04:229,12,0	0/1:11,0:10:7.19:7,0,246	0/1:20,0:19:26.15:26,0,231	0/0:6,0:4:1.06:0,1,30	0/1:12,1:13:0.55:158,0,1	0/1:4,5:10:15.93:183,0,16	1/1:4,2:5:6.96:95,7,0	0/0:10,0:11:30.05:0,30,322	0/1:11,0:11:20:20,0,179	0/1:17,0:16:99:160,0,239	0/0:8,0:7:16.26:0,16,118
chr10	55306526	.	CG	C	242.61	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-4.002;DP=464;FS=6.026;HRun=3;HaplotypeScore=89.1929;InbreedingCoeff=0.7243;MQ=75.55;MQ0=9;MQRankSum=-3.260;QD=7.35;ReadPosRankSum=-1.991;VQSLOD=-0.0395;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:29.02:0,29,150	1/1:7,3:10:7.54:123,8,0	0/0:41,0:18:1.64:0,2,124	0/0:33,0:16:22.51:0,23,173	0/0:13,0:13:26.47:0,26,145	0/0:17,0:17:36.03:0,36,352	0/0:27,0:27:69.02:0,69,673	1/1:22,1:23:31.30:231,31,0	0/0:13,0:13:23.97:0,24,215	0/0:17,0:16:42.26:0,42,378	0/0:5,0:5:11.97:0,12,122	0/0:18,0:18:12.37:0,12,90	0/0:13,0:13:32.99:0,33,354	0/0:11,0:11:33.07:0,33,409	0/0:16,0:16:26.99:0,27,254	0/0:12,0:12:28.31:0,28,352	0/0:18,0:18:23.05:0,23,94	0/0:38,0:38:57.05:0,57,343	0/0:10,0:10:30.03:0,30,302	0/0:9,0:9:23.38:0,23,197	0/0:16,0:16:35.33:0,35,346	0/0:7,0:7:8.11:0,8,31	0/0:4,0:4:6.84:0,7,34	0/0:24,0:24:31.23:0,31,134	0/0:8,0:8:14.27:0,14,158	0/0:14,0:14:41.94:0,42,403	0/0:18,0:18:44.85:0,45,418	0/0:3,0:3:6.02:0,6,71
chr10	55306529	.	G	GA	2144.26	PASS	AB=0.894;AC=26;AF=0.464;AN=56;BaseQRankSum=-6.144;DP=480;FS=0.475;HRun=13;HaplotypeScore=87.2797;InbreedingCoeff=0.5174;MQ=76.05;MQ0=9;MQRankSum=-1.100;QD=7.97;ReadPosRankSum=-4.651;VQSLOD=1.7137;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:27:34.12:0,34,114	0/0:8,0:8:15.85:0,16,66	0/1:44,0:19:6.60:7,0,40	0/0:33,0:16:8.94:0,9,101	0/0:2,0:13:16.25:0,16,47	1/1:4,14:18:19.31:290,19,0	1/1:13,19:32:9.28:328,9,0	0/1:24,0:24:32.85:72,0,33	1/1:4,8:12:12.01:111,12,0	1/1:6,12:18:26:248,26,0	0/1:3,2:5:14.10:22,0,14	0/0:2,0:16:20.52:0,21,60	0/1:11,0:11:3.62:4,0,99	0/0:14,0:14:17.57:0,18,120	1/1:2,14:16:23.99:215,24,0	0/0:13,0:13:28.77:0,29,188	0/0:4,0:18:22.55:0,23,65	0/0:11,0:36:46.62:0,47,157	1/1:3,9:12:9.45:217,9,0	1/1:3,6:9:14.96:130,15,0	0/1:12,1:15:13.59:92,0,14	0/0:0,0:7:5.38:0,5,16	0/0:2,0:4:4.23:0,4,13	0/0:4,0:22:32.58:0,33,94	0/1:7,3:10:10.76:35,0,11	1/1:5,13:18:15.23:250,15,0	1/1:3,16:21:32.91:293,33,0	1/1:1,2:3:3:28,3,0
chr10	55307139	.	AAT	A	6624.83	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=10.219;DP=294;FS=1.257;HRun=0;HaplotypeScore=63.0241;InbreedingCoeff=0.7822;MQ=77.99;MQ0=0;MQRankSum=-0.908;QD=30.39;ReadPosRankSum=6.057;VQSLOD=6.3542;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,15:17:33.11:439,33,0	0/0:6,0:6:18.06:0,18,312	0/0:10,0:8:15.04:0,15,196	0/0:11,0:6:2.61:0,3,38	1/1:2,6:8:15.05:200,15,0	1/1:0,6:6:15.05:200,15,0	1/1:0,2:2:3.01:40,3,0	0/0:29,0:29:78.26:0,78,1261	1/1:0,4:4:9.03:120,9,0	1/1:3,11:14:33.05:398,33,0	1/1:2,5:7:15.05:200,15,0	1/1:0,7:7:21.07:280,21,0	0/0:9,0:9:21.07:0,21,337	0/0:3,0:3:9.03:0,9,142	1/1:2,4:6:12.04:160,12,0	0/0:8,0:8:15.05:0,15,260	1/1:3,34:37:99:1317,99,0	1/1:0,18:18:48.16:637,48,0	1/1:0,15:15:45.14:581,45,0	1/1:4,2:6:6.02:74,6,0	1/1:1,6:7:15.05:200,15,0	1/1:4,2:6:3.01:39,3,0	1/1:0,3:3:3.01:40,3,0	1/1:5,0:5:3:25,3,0	1/1:1,8:9:24.08:319,24,0	1/1:3,7:10:21.07:278,21,0	1/1:3,6:9:15.05:200,15,0	1/1:0,22:22:66.22:879,66,0
chr10	55307572	.	T	TAGGTGGCGC	1411.78	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-4.484;DP=545;FS=0.000;HRun=0;HaplotypeScore=169.8159;InbreedingCoeff=0.8835;MQ=85.01;MQ0=0;MQRankSum=-3.025;QD=74.30;ReadPosRankSum=-2.840;VQSLOD=2.9870;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:90.31:0,90,2571	0/0:7,0:7:21.07:0,21,581	0/0:14,0:14:36.08:0,36,741	0/0:19,0:20:36.10:0,36,787	0/0:15,0:15:42.13:0,42,1060	0/0:18,0:18:54.17:0,54,1402	0/0:37,0:37:99:0,105,2771	1/1:9,8:19:45.13:1507,45,0	0/0:20,0:20:60.19:0,60,1687	0/0:15,0:15:45.15:0,45,1187	0/0:8,0:8:24.08:0,24,676	0/0:26,0:26:72.25:0,72,2053	0/0:12,0:12:33.11:0,33,986	0/0:22,0:22:63.20:0,63,1729	0/0:15,0:15:39.12:0,39,1038	0/0:4,0:4:9.03:0,9,270	0/0:21,0:21:60.21:0,60,1693	0/0:35,0:35:93.32:0,93,2604	0/0:13,0:13:36.12:0,36,1047	0/0:15,0:15:45.15:0,45,1310	0/0:60,0:60:99:0,172,4533	0/0:13,0:13:39.10:0,39,1000	0/0:10,0:10:30.10:0,30,872	0/0:28,0:28:77.90:0,78,2126	0/0:8,0:8:9.03:0,9,251	0/0:29,0:29:78.27:0,78,2208	0/0:20,0:20:51.17:0,51,1334	0/0:6,0:6:18.06:0,18,541
chr10	55309790	.	A	AT	11587.45	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=-8.492;DP=576;FS=1.961;HRun=9;HaplotypeScore=55.9279;InbreedingCoeff=0.9477;MQ=63.40;MQ0=1;MQRankSum=-1.066;QD=24.87;ReadPosRankSum=4.137;VQSLOD=5.4503;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,35:39:61.18:903,61,0	0/0:13,0:13:29.99:0,30,260	0/0:14,0:13:20.96:0,21,177	0/0:8,1:6:10.12:0,10,69	1/1:2,15:17:36.09:390,36,0	1/1:1,17:18:45.12:498,45,0	1/1:2,17:17:33.09:365,33,0	0/0:33,0:33:80.97:0,81,703	1/1:4,9:13:1.02:239,1,0	1/1:3,27:30:81.20:886,81,0	1/1:1,18:19:54.15:597,54,0	1/1:2,16:19:51.14:563,51,0	0/0:14,0:14:41.99:0,42,365	0/0:15,0:15:41.96:0,42,360	1/1:3,9:12:21.06:232,21,0	0/0:12,0:12:32.98:0,33,283	1/1:2,22:24:60.16:664,60,0	1/1:2,17:19:48.13:531,48,0	1/1:7,24:32:75.02:802,75,0	1/1:4,11:15:33.09:365,33,0	1/1:3,12:15:36.06:385,36,0	1/1:7,15:22:20.55:435,21,0	1/1:5,18:23:45.12:498,45,0	1/1:3,29:32:66.18:730,66,0	1/1:1,33:34:90.24:996,90,0	1/1:8,23:31:66.14:713,66,0	1/1:4,13:17:36.10:398,36,0	1/1:3,12:15:36.10:398,36,0
chr10	55309910	.	G	GTC	2921.92	PASS	AB=0.833;AC=25;AF=0.446;AN=56;BaseQRankSum=0.511;DP=493;FS=3.104;HRun=0;HaplotypeScore=131.5031;InbreedingCoeff=0.5783;MQ=59.04;MQ0=2;MQRankSum=-0.818;QD=11.83;ReadPosRankSum=-0.775;VQSLOD=3.5639;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:0.84:0,1,128	0/0:10,0:10:21.07:0,21,274	0/0:30,0:10:17.78:0,18,174	0/0:43,0:24:28.29:0,28,335	0/1:19,0:16:3.61:4,0,92	1/1:4,15:17:10.99:182,11,0	1/1:10,8:14:24.53:318,25,0	0/0:15,0:14:39.12:0,39,506	0/1:7,11:18:1.10:112,0,1	1/1:7,9:15:32.55:443,33,0	1/1:10,3:13:15:234,15,0	0/0:18,0:18:23.26:0,23,175	0/0:11,0:11:27.06:0,27,336	0/0:15,0:15:33.10:0,33,428	1/1:12,5:16:6.32:175,6,0	0/0:8,0:8:21.07:0,21,279	0/0:20,0:20:29.78:0,30,220	0/0:18,0:18:8.42:0,8,211	0/1:10,3:13:4.63:214,0,5	1/1:9,5:13:12.01:136,12,0	0/1:12,7:17:10.80:133,0,11	0/1:18,0:17:16.71:17,0,169	0/0:19,0:18:19.27:0,19,129	0/0:22,0:21:8.44:0,8,184	1/1:4,4:8:3.01:37,3,0	1/1:18,10:28:56.68:788,57,0	1/1:6,5:12:7.85:152,8,0	1/1:15,0:15:2.80:170,3,0
chr10	55309928	.	C	CTGTGTGTGTG	5924.76	PASS	AB=1.000;AC=42;AF=0.750;AN=56;BaseQRankSum=5.117;DP=442;FS=11.088;HRun=0;HaplotypeScore=199.9480;InbreedingCoeff=0.5958;MQ=51.05;MQ0=6;MQRankSum=-4.798;QD=16.06;ReadPosRankSum=-1.899;VQSLOD=2.0978;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:15,0:15:0.07:0,0,0	0/1:11,0:10:0:0,0,0	0/0:21,0:7:1.21:0,1,6	0/0:21,0:10:2.90:0,3,16	0/1:14,0:11:0:1,0,0	1/1:21,0:18:10.52:309,11,0	1/1:19,0:14:5.42:90,5,0	1/1:12,0:9:3.01:93,3,0	1/1:18,0:18:11.60:310,12,0	1/1:19,0:17:25.90:747,26,0	1/1:11,0:11:2.78:51,3,0	1/1:21,0:22:24.03:630,24,0	0/0:9,0:9:24.08:0,24,713	0/0:16,0:16:42.13:0,42,1148	1/1:15,0:18:9.04:161,9,0	0/0:6,0:6:15.05:0,15,330	1/1:23,0:23:8.88:207,9,0	1/1:16,0:17:15.94:544,16,0	1/1:15,0:15:27.05:522,27,0	1/1:7,0:6:2.58:23,3,0	0/1:23,0:19:0.02:0,0,1	1/1:14,0:13:8.83:174,9,0	1/1:15,0:15:10.58:272,11,0	1/1:25,0:23:6.96:108,7,0	1/1:7,0:7:6.02:166,6,0	1/1:19,5:25:27.08:844,27,0	1/1:12,0:12:14.97:420,15,0	1/1:3,1:4:9.03:253,9,0
chr10	55309945	.	TGCGCGC	T	1505.17	PASS	AB=0.942;AC=34;AF=0.630;AN=54;BaseQRankSum=1.473;DP=407;FS=9.358;HRun=0;HaplotypeScore=164.5846;InbreedingCoeff=0.1418;MQ=48.47;MQ0=7;MQRankSum=-2.263;QD=4.33;ReadPosRankSum=-3.740;VQSLOD=1.0063;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:14,4:18:2.88:50,3,0	1/1:7,1:7:3.01:54,3,0	1/1:8,0:3:0.46:1,0,0	0/0:13,0:6:3.01:0,3,32	0/1:9,1:6:0:0,0,0	1/1:21,0:18:6.39:62,6,0	1/1:12,0:14:3.14:49,3,0	./.	0/1:17,0:17:36.92:49,0,37	0/1:18,0:18:26.44:148,0,26	0/1:9,0:10:4.32:58,0,4	1/1:22,1:23:20.91:263,21,0	0/0:10,0:10:21.07:0,21,583	0/0:18,0:18:33.10:0,33,862	1/1:20,0:19:9.74:128,10,0	0/0:5,0:6:6.02:0,6,135	1/1:23,1:24:8.65:240,9,0	0/1:14,1:15:2.52:98,0,3	1/1:14,0:14:5.81:58,6,0	0/1:6,0:6:0:0,0,0	1/1:18,0:16:0.36:1,0,0	0/1:10,1:10:0.18:0,0,0	1/1:13,1:13:2.94:19,3,0	0/1:22,3:23:0:1,0,0	0/1:8,0:8:8.31:47,0,8	0/1:22,0:22:36.43:261,0,36	0/1:9,0:9:7.97:52,0,8	0/1:3,0:3:2.78:3,0,15
chr10	55310250	.	A	ATT	10888.60	PASS	AB=0.558;AC=43;AF=0.768;AN=56;BaseQRankSum=-1.733;DP=599;FS=1.935;HRun=9;HaplotypeScore=91.0226;InbreedingCoeff=0.8721;MQ=76.64;MQ0=0;MQRankSum=-2.952;QD=22.73;ReadPosRankSum=2.839;VQSLOD=4.3819;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,0:37:74.86:257,75,0	1/1:1,0:8:15.86:53,16,0	0/0:21,0:22:34.46:0,34,324	0/0:12,0:13:11.75:0,12,107	1/1:4,0:19:6.19:91,6,0	1/1:3,22:26:59.69:886,60,0	1/1:2,16:19:38.62:563,39,0	0/0:24,0:24:54.08:0,54,564	1/1:3,19:23:53.67:794,54,0	1/1:3,16:19:48.14:697,48,0	1/1:3,13:17:41.58:575,42,0	0/1:5,0:24:14.39:91,0,14	0/0:14,0:14:39.10:0,39,415	0/0:28,0:28:69.62:0,70,727	1/1:1,12:13:23.77:369,24,0	0/0:19,0:19:54.13:0,54,575	1/1:3,0:24:49.78:171,50,0	1/1:1,0:19:42.30:145,42,0	1/1:3,22:27:71.19:1009,71,0	1/1:6,24:32:71.61:983,72,0	1/1:5,14:19:36.12:553,36,0	1/1:3,0:21:45.26:155,45,0	1/1:5,1:24:45.31:192,45,0	1/1:3,0:15:27.45:94,27,0	1/1:3,17:22:56.14:778,56,0	1/1:4,17:24:61.67:847,62,0	1/1:3,34:39:92.80:1392,93,0	1/1:1,6:8:14.54:193,15,0
chr10	55311154	.	TA	T	201.59	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.828;DP=613;FS=0.000;HRun=1;HaplotypeScore=67.2272;InbreedingCoeff=0.7872;MQ=67.81;MQ0=1;MQRankSum=-0.731;QD=25.20;ReadPosRankSum=-0.556;VQSLOD=3.2631;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:93.32:0,93,1465	1/1:0,8:8:21.07:294,21,0	0/0:14,0:13:1.86:0,2,111	0/0:15,0:13:9.43:0,9,256	0/0:36,0:36:99:0,108,1674	0/0:23,0:23:69.22:0,69,1065	0/0:18,0:18:54.18:0,54,860	0/0:35,0:35:99:0,105,1645	0/0:20,0:20:60.20:0,60,943	0/0:29,0:29:84.26:0,84,1251	0/0:19,0:19:57.19:0,57,910	0/0:20,0:20:60.20:0,60,949	0/0:22,0:22:63.21:0,63,996	0/0:18,0:18:54.17:0,54,828	0/0:17,0:17:51.14:0,51,764	0/0:15,0:15:45.15:0,45,710	0/0:34,0:34:99:0,102,1617	0/0:28,0:28:84.27:0,84,1305	0/0:16,0:16:45.15:0,45,696	0/0:25,0:25:72.23:0,72,1116	0/0:16,0:16:45.15:0,45,691	0/0:14,0:14:42.13:0,42,644	0/0:22,0:22:66.21:0,66,1029	0/0:17,0:17:51.17:0,51,800	0/0:33,0:33:99:0,99,1565	0/0:36,0:37:99:0,108,1694	0/0:21,0:21:63.21:0,63,1001	0/0:9,0:9:27.09:0,27,431
chr10	55311443	.	T	TGG	10232.60	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=0.586;DP=582;FS=2.413;HRun=7;HaplotypeScore=113.3622;InbreedingCoeff=0.9321;MQ=86.77;MQ0=3;MQRankSum=-6.858;QD=23.36;ReadPosRankSum=-0.389;VQSLOD=3.6661;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:10,31:43:95.76:1481,96,0	1/1:4,0:4:3.01:33,3,0	0/0:29,0:29:57.08:0,57,622	0/0:21,0:21:42.08:0,42,470	1/1:3,13:17:30.06:461,30,0	1/1:7,0:16:24:222,24,0	1/1:9,1:27:61.93:604,62,0	0/0:30,0:29:66.15:0,66,752	1/1:9,0:26:42.48:410,42,0	1/1:12,0:16:19.94:207,20,0	1/1:9,0:11:12.41:127,12,0	1/1:5,24:28:60.20:975,60,0	0/0:20,0:20:57.17:0,57,664	0/0:25,0:25:60.16:0,60,699	1/1:9,0:31:64.93:623,65,0	0/0:19,0:19:51.14:0,51,594	1/1:3,31:34:89.68:1403,90,0	1/1:2,17:19:39.13:640,39,0	1/1:7,0:12:21.04:215,21,0	1/1:13,0:13:8.94:106,9,0	1/1:12,0:28:11.83:116,12,0	1/1:2,11:13:26.98:438,27,0	1/1:1,8:9:18.06:290,18,0	1/1:2,19:22:51.17:816,51,0	1/1:6,0:19:30.06:305,30,0	1/1:11,2:22:26.45:310,26,0	1/1:4,0:16:33.07:334,33,0	1/1:4,0:9:12.02:117,12,0
chr10	55311696	.	T	TTG	1733.54	PASS	AB=0.860;AC=19;AF=0.365;AN=52;BaseQRankSum=-2.012;DP=611;FS=0.000;HRun=0;HaplotypeScore=115.3353;InbreedingCoeff=0.3254;MQ=62.91;MQ0=15;MQRankSum=2.315;QD=6.00;ReadPosRankSum=0.151;VQSLOD=3.1208;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:32,2:34:21.03:252,21,0	1/1:9,0:9:4.23:26,4,0	./.	./.	1/1:14,2:13:8.86:113,9,0	0/1:23,0:23:6.14:6,0,313	0/0:22,0:22:20.87:0,21,201	0/0:32,0:30:1.24:0,1,3	0/0:24,0:25:32.90:0,33,329	0/0:24,0:23:11.79:0,12,111	0/0:16,0:17:17.87:0,18,169	0/1:10,10:20:35.95:159,0,36	0/1:10,1:12:26.75:27,0,127	0/0:17,0:17:20.99:0,21,217	0/0:13,0:13:9.02:0,9,98	0/0:15,0:19:20.72:0,21,191	0/1:23,10:34:99:218,0,133	1/1:13,6:19:15.05:221,15,0	0/0:17,0:16:14.56:0,15,162	0/0:14,0:14:11.86:0,12,112	0/0:41,0:41:23.30:0,23,216	1/1:17,1:20:16.88:203,17,0	1/1:10,7:17:5.21:211,5,0	0/1:23,15:39:40.10:404,0,40	0/0:11,0:13:11.84:0,12,102	0/1:25,2:25:45.36:45,0,100	0/0:22,0:20:20.81:0,21,241	0/1:14,0:17:22.70:23,0,108
chr10	55312122	.	GA	G	5202.56	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=10.924;DP=670;FS=1.822;HRun=10;HaplotypeScore=105.2304;InbreedingCoeff=0.9996;MQ=80.37;MQ0=2;MQRankSum=0.597;QD=22.23;ReadPosRankSum=5.190;VQSLOD=4.4783;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,44:49:99:1094,126,0	0/0:15,0:15:39.11:0,39,431	0/0:29,0:25:42.36:0,42,375	0/0:25,0:21:37.77:0,38,378	1/1:0,25:25:74.98:650,75,0	0/0:24,0:24:60.16:0,60,664	0/0:23,0:23:57.13:0,57,618	0/0:24,0:24:45.10:0,45,483	0/0:25,0:25:40.31:0,40,671	0/0:25,0:25:57.15:0,57,630	0/0:24,0:24:63.16:0,63,689	1/1:2,23:25:65.98:573,66,0	0/0:15,0:15:42.10:0,42,455	0/0:21,0:21:57.13:0,57,615	0/0:24,0:24:66.16:0,66,716	0/0:14,0:14:42.11:0,42,465	1/1:3,32:35:89.95:776,90,0	1/1:2,28:30:65.99:573,66,0	0/0:28,0:29:75.04:0,75,810	0/0:22,0:22:51.12:0,51,554	0/0:9,0:9:24.06:0,24,266	1/1:2,21:23:62.98:547,63,0	1/1:4,18:22:47.98:417,48,0	1/1:1,24:25:65.98:573,66,0	0/0:19,0:19:57.15:0,57,624	0/0:29,0:29:78.21:0,78,863	0/0:24,0:24:63.17:0,63,697	0/0:15,0:15:45.07:0,45,470
chr10	55312637	.	A	AG	139.66	PASS	AB=0.958;AC=5;AF=0.089;AN=56;BaseQRankSum=-1.775;DP=641;FS=2.786;HRun=10;HaplotypeScore=107.0493;InbreedingCoeff=0.8280;MQ=79.69;MQ0=2;MQRankSum=-2.643;QD=3.04;ReadPosRankSum=-2.229;VQSLOD=0.0128;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:76.19:0,76,658	1/1:4,8:12:14.50:140,14,0	0/0:33,0:29:51.05:0,51,389	0/0:26,0:23:43.90:0,44,313	0/0:23,0:23:55.03:0,55,503	1/1:11,0:11:20.33:115,20,0	0/0:19,0:19:50.89:0,51,409	0/1:21,1:23:2.83:3,0,166	0/0:29,0:29:74.86:0,75,606	0/0:22,0:25:54.38:0,54,414	0/0:15,0:15:24.50:0,25,182	0/0:25,0:25:68.90:0,69,563	0/0:18,0:18:44.48:0,44,345	0/0:18,0:18:35.53:0,36,281	0/0:31,0:31:80.76:0,81,651	0/0:19,1:20:15.63:0,16,315	0/0:23,0:23:56.91:0,57,464	0/0:20,0:20:57.37:0,57,462	0/0:14,0:14:35.93:0,36,292	0/0:32,0:33:68.77:0,69,612	0/0:18,0:18:44.89:0,45,360	0/0:25,0:26:59.06:0,59,544	0/0:23,0:23:37.57:0,38,413	0/0:20,0:20:33.01:0,33,345	0/0:27,0:28:56.29:0,56,502	0/0:31,0:31:74.85:0,75,615	0/0:28,0:28:83.88:0,84,683	0/0:14,0:14:32.96:0,33,271
chr10	55314589	.	C	CTGTGCAGAGATTAAAGG	98125.86	PASS	AB=0.944;AC=47;AF=0.839;AN=56;BaseQRankSum=-1.009;DP=693;FS=3.611;HRun=0;HaplotypeScore=278.0357;InbreedingCoeff=0.8672;MQ=64.66;MQ0=0;MQRankSum=-13.013;QD=156.50;ReadPosRankSum=0.013;VQSLOD=4.0269;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:26,7:38:72.25:4339,72,0	1/1:6,3:11:27.09:1750,27,0	0/0:20,0:20:45.15:0,45,1829	0/0:17,0:17:36.12:0,36,1288	1/1:22,11:34:84.29:4055,84,0	1/1:12,9:22:60.21:4277,60,0	1/1:14,8:23:60.21:4126,60,0	1/1:31,0:31:93.30:5368,93,0	1/1:13,13:29:75.26:5484,75,0	1/1:28,11:39:99:8011,111,0	1/1:18,10:30:78.27:3988,78,0	1/1:16,14:31:81.23:5708,81,0	0/0:16,0:16:42.14:0,42,1913	0/0:13,0:13:33.11:0,33,1515	1/1:17,7:26:63.22:4417,63,0	0/1:16,1:17:99:202,0,1826	1/1:17,3:24:51.13:3524,51,0	1/1:12,6:20:39.09:2904,39,0	1/1:13,1:16:36.08:1894,36,0	1/1:13,7:22:60.21:3114,60,0	1/1:14,3:18:45.15:2564,45,0	1/1:24,11:36:99:5996,99,0	1/1:12,6:20:45.02:2269,45,0	1/1:14,4:18:42.10:2625,42,0	1/1:16,11:30:72.25:4490,72,0	1/1:24,10:37:99:7305,111,0	1/1:18,13:34:87.30:6419,87,0	1/1:8,10:21:42.14:3296,42,0
chr10	55315406	.	AAAC	A	557.89	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=1.397;DP=779;FS=2.069;HRun=0;HaplotypeScore=145.1782;InbreedingCoeff=0.9960;MQ=78.53;MQ0=0;MQRankSum=-0.078;QD=32.82;ReadPosRankSum=0.578;VQSLOD=3.9370;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,120,2331	1/1:1,16:17:45.14:653,45,0	0/0:37,0:35:75.25:0,75,1460	0/0:30,0:30:48.13:0,48,957	0/0:21,0:21:51.17:0,51,1017	0/0:28,0:28:72.20:0,72,1368	0/0:25,0:25:69.19:0,69,1394	0/0:27,1:28:24.71:0,25,1322	0/0:25,0:25:60.14:0,60,1156	0/0:33,0:33:81.28:0,81,1645	0/0:22,0:22:42.14:0,42,776	0/0:22,0:22:51.17:0,51,1028	0/0:20,0:20:51.18:0,51,1050	0/0:24,0:24:60.21:0,60,1218	0/0:42,0:42:99:0,111,2142	0/0:27,0:27:69.24:0,69,1430	0/0:32,0:32:75.24:0,75,1498	0/0:17,0:17:36.12:0,36,750	0/0:15,0:15:39.13:0,39,782	0/0:27,0:27:72.24:0,72,1399	0/0:42,0:42:99:0,111,2307	0/0:27,0:27:60.20:0,60,1190	0/0:17,0:17:42.14:0,42,801	0/0:24,0:24:57.20:0,57,1179	0/0:32,0:31:81.28:0,81,1611	0/0:32,0:32:72.21:0,72,1456	0/0:49,0:49:99:0,120,2372	0/0:9,0:9:24.08:0,24,428
chr10	55315477	.	C	CTCTGAA	39812.06	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=2.564;DP=710;FS=7.064;HRun=0;HaplotypeScore=153.3259;InbreedingCoeff=0.9988;MQ=74.93;MQ0=0;MQRankSum=-17.249;QD=74.55;ReadPosRankSum=0.803;VQSLOD=5.6345;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,22:37:60.21:1894,60,0	0/0:13,0:13:39.09:0,39,826	0/0:21,0:22:42.34:0,42,1112	0/0:23,0:23:59.44:0,59,1118	1/1:4,22:29:68.99:1736,69,0	1/1:3,26:31:81.28:2898,81,0	1/1:3,18:27:60.21:2000,60,0	0/0:39,0:39:99:0,108,2402	1/1:3,23:30:72.25:2516,72,0	1/1:3,23:31:90.24:2916,90,0	1/1:2,16:22:50.96:1388,51,0	1/1:5,12:21:48.16:1605,48,0	0/0:28,0:28:81.23:0,81,1830	0/0:29,0:29:84.29:0,84,2025	1/1:4,28:34:87.30:2914,87,0	0/0:22,0:22:66.23:0,66,1620	1/1:2,13:20:39.13:1403,39,0	1/1:1,8:11:27.05:837,27,0	1/1:5,11:24:69.18:1829,69,0	1/1:4,17:21:57.20:1859,57,0	1/1:3,20:30:45.15:1262,45,0	1/1:2,17:21:60.12:1748,60,0	1/1:2,13:17:42.14:1302,42,0	1/1:3,11:16:27.09:925,27,0	1/1:3,24:33:66.23:2261,66,0	1/1:5,24:31:87.27:2938,87,0	1/1:5,24:40:84.29:2813,84,0	1/1:0,7:8:21.07:767,21,0
chr10	55317273	.	GCACACACACACACACACACACACACACACACACACACACA	G	313.97	PASS	AB=1.000;AC=12;AF=0.231;AN=52;BaseQRankSum=0.718;DP=513;FS=1.365;HRun=0;HaplotypeScore=359.4505;InbreedingCoeff=0.5178;MQ=51.66;MQ0=57;MQRankSum=2.477;QD=2.15;ReadPosRankSum=0.541;VQSLOD=1.4740;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:36,0:33:11.04:130,11,0	0/0:9,0:7:3.01:0,3,97	./.	./.	1/1:14,5:15:5.19:27,5,0	0/0:19,0:17:12.04:0,12,620	0/0:21,0:14:12.01:0,12,140	0/0:13,0:13:12.04:0,12,312	0/0:13,0:12:21.07:0,21,799	0/0:26,0:20:23.67:0,24,834	0/0:9,0:7:6.02:0,6,132	0/1:16,0:15:43.94:44,0,385	0/0:14,0:10:17.34:0,17,1802	0/0:15,0:14:14.68:0,15,1610	0/0:11,0:9:18.06:0,18,679	0/0:9,0:9:14.94:0,15,1518	1/1:19,0:17:2.99:24,3,0	0/1:19,0:16:9.99:10,0,148	0/0:12,0:12:17.33:0,17,396	0/0:13,0:11:9.03:0,9,396	0/0:35,0:30:18.06:0,18,680	1/1:11,0:9:2.99:25,3,0	0/0:11,0:8:3:0,3,25	1/1:25,0:24:9.01:201,9,0	0/0:21,0:19:18.06:0,18,748	0/0:28,0:22:21.05:0,21,512	0/0:15,0:15:11.25:0,11,312	0/0:8,0:7:0.47:0,0,1
chr10	55318800	.	G	GA	12639.29	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-10.481;DP=525;FS=0.825;HRun=1;HaplotypeScore=62.6020;InbreedingCoeff=0.9950;MQ=90.31;MQ0=0;MQRankSum=-6.631;QD=35.60;ReadPosRankSum=5.142;VQSLOD=4.7887;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,34:35:84.21:1209,84,0	1/1:0,7:8:18.06:269,18,0	0/0:46,0:36:86.42:0,86,1092	0/0:60,0:47:99:0,100,1178	1/1:1,13:14:35.83:386,36,0	1/1:1,16:17:39.06:557,39,0	1/1:2,13:15:30.10:449,30,0	0/0:20,0:20:57.18:0,57,728	1/1:0,9:9:27.05:380,27,0	1/1:3,11:14:33.10:475,33,0	1/1:3,7:10:18.06:270,18,0	1/1:1,10:11:24.08:350,24,0	0/0:11,0:11:24.08:0,24,310	0/0:15,0:15:45.15:0,45,584	1/1:0,13:13:27.02:378,27,0	0/0:18,0:18:51.05:0,51,606	1/1:0,17:17:48.16:719,48,0	1/1:0,19:19:51.17:764,51,0	1/1:1,17:18:51.17:750,51,0	1/1:0,13:13:33.08:469,33,0	1/1:2,28:30:75.25:1118,75,0	1/1:2,13:15:30.05:423,30,0	1/1:0,11:11:33.02:443,33,0	1/1:1,18:19:48.16:718,48,0	1/1:0,17:17:35.91:539,36,0	1/1:1,17:18:48.15:696,48,0	1/1:0,16:15:45.10:647,45,0	1/1:0,16:16:42.14:629,42,0
chr10	55320221	.	A	AT	6380.56	PASS	AB=0.797;AC=42;AF=0.750;AN=56;BaseQRankSum=-2.808;DP=476;FS=2.119;HRun=12;HaplotypeScore=83.7426;InbreedingCoeff=0.5386;MQ=73.08;MQ0=1;MQRankSum=-2.564;QD=16.44;ReadPosRankSum=1.047;VQSLOD=5.8451;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,8:12:21.03:203,21,0	0/1:6,1:7:14.27:14,0,73	0/1:20,1:19:20.82:21,0,85	0/0:13,0:11:8.77:0,9,58	1/1:7,15:22:23.49:445,23,0	1/1:3,15:20:47.71:428,48,0	1/1:5,20:26:37.84:497,38,0	0/0:29,2:31:16.19:0,16,445	1/1:3,7:10:5.08:202,5,0	1/1:7,17:27:53.59:481,54,0	0/1:9,8:17:4.96:245,0,5	1/1:3,13:16:39.01:369,39,0	0/0:15,0:16:31.80:0,32,225	0/0:12,0:12:17.21:0,17,148	1/1:11,8:19:35.93:317,36,0	0/0:16,0:16:32.68:0,33,235	1/1:6,16:23:25.58:395,26,0	1/1:3,9:13:1.97:167,2,0	1/1:7,10:16:32.89:306,33,0	1/1:8,18:27:26.83:558,27,0	1/1:4,4:8:6.01:58,6,0	1/1:4,5:9:23.98:216,24,0	1/1:7,7:18:35.49:285,35,0	1/1:1,6:8:14.98:136,15,0	1/1:11,7:20:38.61:323,39,0	1/1:9,6:16:3.67:215,4,0	0/1:12,10:23:11.79:358,0,12	1/1:4,4:7:15.02:144,15,0
chr10	55320254	.	TTCTCTCTCTC	T	7748.63	PASS	AB=0.917;AC=35;AF=0.648;AN=54;BaseQRankSum=3.493;DP=420;FS=23.512;HRun=0;HaplotypeScore=148.4546;InbreedingCoeff=0.5823;MQ=65.55;MQ0=11;MQRankSum=-5.633;QD=26.81;ReadPosRankSum=2.563;VQSLOD=2.5695;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/1:9,0:8:56.63:57,0,93	0/0:21,0:17:6.02:0,6,77	0/0:17,0:10:6.02:0,6,75	1/1:10,0:18:18.05:377,18,0	1/1:11,6:17:24.08:650,24,0	1/1:16,2:18:18.06:370,18,0	0/0:24,0:23:16.39:0,16,165	1/1:5,4:10:9.04:421,9,0	1/1:17,2:19:18.06:373,18,0	1/1:10,13:22:27.09:740,27,0	1/1:5,0:7:6.02:140,6,0	0/0:15,0:17:39.13:0,39,1698	0/0:4,0:9:15.05:0,15,653	1/1:8,8:16:26.12:724,26,0	0/0:8,0:19:24.08:0,24,634	0/0:14,0:14:6.62:0,7,31	0/1:6,0:7:15.53:64,0,16	1/1:12,0:13:7.73:179,8,0	1/1:27,8:33:34.79:828,35,0	0/0:5,0:3:2.37:0,2,8	1/1:6,0:10:6.02:139,6,0	1/1:6,0:12:12.04:279,12,0	1/1:2,0:4:6.02:140,6,0	1/1:9,9:18:5.16:523,5,0	1/1:11,14:24:37.56:858,38,0	1/1:8,8:16:29.77:771,30,0	0/1:6,1:6:99:117,0,163
chr10	55320278	.	CTCTCTCTCTCTCTCTCT	C	1177.10	PASS	AB=0.997;AC=11;AF=0.196;AN=56;BaseQRankSum=5.713;DP=458;FS=9.683;HRun=0;HaplotypeScore=222.6394;InbreedingCoeff=-0.0804;MQ=46.26;MQ0=23;MQRankSum=-4.734;QD=8.53;ReadPosRankSum=4.383;VQSLOD=1.4719;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:10,0:10:19.04:19,0,160	1/1:5,5:8:3.01:144,3,0	0/0:14,0:5:9.47:0,9,152	0/1:33,0:10:3.50:4,0,117	0/1:22,0:22:99:452,0,146	0/0:14,0:13:17.61:0,18,284	0/0:23,0:23:35.57:0,36,950	0/0:22,0:21:42.51:0,43,1026	0/0:13,0:13:3.54:0,4,304	0/0:17,0:16:25.07:0,25,749	0/0:27,0:25:38.63:0,39,691	0/1:9,0:8:99:117,0,175	0/0:18,0:18:51.17:0,51,3294	0/0:11,0:11:24.08:0,24,1349	0/0:15,0:15:39.01:0,39,483	0/0:17,0:17:33.02:0,33,1486	0/0:14,0:14:23.32:0,23,275	0/1:10,0:10:68.09:68,0,184	0/1:11,0:8:5.17:5,0,237	0/0:30,0:28:44.53:0,45,734	0/0:7,0:4:10.80:0,11,210	0/1:13,0:13:99:151,0,211	0/1:13,0:12:99:178,0,176	0/1:6,0:6:52.76:181,0,53	0/0:19,0:19:16.06:0,16,419	0/0:27,0:26:69.53:0,70,1250	0/0:20,0:19:51.10:0,51,952	0/0:12,0:11:28.33:0,28,790
chr10	55320543	.	TTC	T	1802.40	PASS	AB=0.811;AC=43;AF=0.768;AN=56;BaseQRankSum=2.267;DP=500;FS=0.000;HRun=0;HaplotypeScore=76.0111;InbreedingCoeff=0.0749;MQ=61.55;MQ0=7;MQRankSum=-0.640;QD=4.24;ReadPosRankSum=0.105;VQSLOD=2.1802;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,0:20:5.59:40,6,0	1/1:6,0:11:5.68:28,6,0	0/0:31,0:20:0:0,0,0	0/0:28,0:16:0:0,0,0	0/1:13,0:20:5.29:9,0,5	1/1:13,4:17:15.27:221,15,0	1/1:11,5:16:3.01:33,3,0	1/1:26,0:23:0.59:5,1,0	1/1:10,8:18:15.04:164,15,0	1/1:9,6:15:14.89:139,15,0	0/1:14,2:16:47.43:47,0,133	1/1:12,0:15:10.08:46,10,0	0/0:16,0:16:12.44:0,12,112	0/1:9,0:9:19.27:19,0,40	1/1:10,3:13:15.04:164,15,0	0/1:4,0:9:13.70:19,0,14	1/1:9,0:14:2.84:14,3,0	1/1:13,0:19:2.79:23,3,0	1/1:17,5:19:14.13:148,14,0	1/1:13,4:17:9.30:68,9,0	1/1:23,1:26:22.94:198,23,0	0/1:5,0:11:2.16:31,0,2	1/1:7,0:13:5.48:37,5,0	0/1:10,0:12:3.15:20,0,3	1/1:8,6:14:6.02:65,6,0	1/1:15,12:27:18.34:179,18,0	1/1:15,2:24:20.72:191,21,0	0/1:17,1:17:26.72:27,0,39
chr10	55320830	.	GCT	G	7701.82	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=4.620;DP=527;FS=10.779;HRun=0;HaplotypeScore=103.4789;InbreedingCoeff=0.9695;MQ=64.28;MQ0=2;MQRankSum=-2.322;QD=21.39;ReadPosRankSum=6.952;VQSLOD=4.6168;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,22:30:32.06:579,32,0	0/0:6,0:6:12.04:0,12,196	0/0:29,1:24:6.62:0,7,497	0/0:42,0:24:27.69:0,28,318	1/1:2,8:10:21.07:258,21,0	1/1:9,16:25:33.10:406,33,0	1/1:5,12:19:38.36:386,38,0	0/0:27,0:27:51.12:0,51,678	1/1:3,10:13:30.09:367,30,0	1/1:4,9:13:27.07:322,27,0	1/1:5,5:10:18.05:221,18,0	1/1:4,8:12:19.73:309,20,0	0/0:17,0:17:39.12:0,39,597	0/0:26,0:26:62.54:0,63,930	1/1:4,14:17:45.10:536,45,0	0/0:18,0:18:30.08:0,30,462	1/1:5,9:13:27.08:332,27,0	1/1:5,11:16:24.07:295,24,0	1/1:7,4:11:17.99:191,18,0	1/1:10,12:23:34.35:409,34,0	1/1:4,15:19:33.10:405,33,0	1/1:8,8:16:20:289,20,0	1/1:7,10:17:30.09:366,30,0	1/1:8,13:21:39.08:457,39,0	1/1:6,9:15:26.84:332,27,0	1/1:5,9:14:32.99:370,33,0	1/1:10,15:24:48.13:576,48,0	1/1:9,10:19:24.07:295,24,0
chr10	55320861	.	TTCTCTCTCTC	T	2779.85	PASS	AB=0.775;AC=28;AF=0.519;AN=54;BaseQRankSum=1.272;DP=542;FS=5.253;HRun=0;HaplotypeScore=187.4427;InbreedingCoeff=0.6650;MQ=57.52;MQ0=23;MQRankSum=-3.938;QD=12.14;ReadPosRankSum=-0.320;VQSLOD=2.1367;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:24:18.04:0,18,368	1/1:3,0:6:1.44:4,1,0	./.	0/0:54,0:16:3.01:0,3,89	0/0:16,0:15:6.02:0,6,91	1/1:10,3:13:11.99:239,12,0	1/1:18,3:21:15.04:277,15,0	0/0:45,0:43:31.41:0,31,409	1/1:10,6:17:21.14:294,21,0	1/1:7,0:8:5.78:34,6,0	0/1:9,0:11:22.46:46,0,22	0/0:12,0:19:42.14:0,42,1109	0/0:15,0:16:42.13:0,42,1289	0/0:21,0:22:33.10:0,33,1039	1/1:9,12:21:8.86:150,9,0	0/1:11,0:19:40.63:41,0,91	0/0:13,0:18:23.82:0,24,584	0/0:15,0:17:24:0,24,491	1/1:7,2:7:6.02:165,6,0	1/1:15,9:25:12.82:160,13,0	1/1:15,0:14:2.74:12,3,0	0/0:11,0:13:15.03:0,15,203	0/0:12,0:13:5.58:0,6,63	0/0:11,0:13:9.03:0,9,277	1/1:7,10:17:11.97:232,12,0	1/1:8,8:16:25.63:627,26,0	1/1:12,9:21:28.98:604,29,0	1/1:9,0:10:6:93,6,0
chr10	55320982	.	G	GTC	5549.38	PASS	AB=0.703;AC=38;AF=0.679;AN=56;BaseQRankSum=0.717;DP=541;FS=25.939;HRun=0;HaplotypeScore=87.0703;InbreedingCoeff=0.7235;MQ=51.33;MQ0=26;MQRankSum=1.628;QD=16.27;ReadPosRankSum=1.260;VQSLOD=2.5644;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:9,20:26:2.70:0,3,37	0/0:10,0:10:11.95:0,12,150	0/0:36,0:13:14.41:0,14,157	0/0:42,0:12:3:0,3,37	0/1:11,3:14:19.41:223,0,19	1/1:26,0:25:33.11:545,33,0	1/1:23,1:24:30.10:493,30,0	0/0:28,0:26:39.12:0,39,479	1/1:13,1:14:17.95:237,18,0	1/1:12,15:27:54.53:730,55,0	1/1:23,0:23:12.03:167,12,0	1/1:6,18:24:2.96:19,3,0	0/0:16,0:16:30.09:0,30,375	0/0:21,0:20:28.96:0,29,373	1/1:14,0:13:15.52:248,16,0	0/0:17,0:17:32.95:0,33,412	1/1:17,2:19:27.56:419,28,0	1/1:3,8:11:3.01:49,3,0	1/1:8,6:9:9.02:125,9,0	1/1:15,1:16:18.03:225,18,0	1/1:19,0:18:6.02:99,6,0	1/1:17,1:15:24.08:388,24,0	0/1:2,5:7:0:0,0,0	1/1:17,0:16:18.06:297,18,0	1/1:17,1:18:24.07:372,24,0	1/1:3,13:16:33.05:406,33,0	1/1:16,0:15:22.20:405,22,0	1/1:4,0:4:6.07:101,6,0
chr10	55320994	.	CTG	C	3124.74	PASS	AB=0.957;AC=30;AF=0.536;AN=56;BaseQRankSum=5.193;DP=482;FS=4.077;HRun=0;HaplotypeScore=92.3585;InbreedingCoeff=0.5143;MQ=46.35;MQ0=22;MQRankSum=2.157;QD=9.70;ReadPosRankSum=-0.319;VQSLOD=3.1924;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:25:0.55:1,0,53	0/0:9,0:9:10.68:0,11,189	0/0:19,0:5:14.98:0,15,195	0/0:26,0:3:3.01:0,3,48	0/1:15,1:16:71.88:75,0,72	1/1:15,12:26:32.83:274,33,0	1/1:12,8:20:29.96:248,30,0	0/0:21,0:19:47.94:0,48,682	1/1:11,3:14:17.62:210,18,0	1/1:20,3:22:44.44:548,44,0	1/1:12,7:19:11.52:116,12,0	0/0:23,0:23:5.60:0,6,36	0/0:13,0:13:32.47:0,32,349	0/0:17,0:16:14.17:0,14,409	1/1:8,8:15:14.94:122,15,0	0/0:14,0:14:32.31:0,32,473	0/1:23,0:23:90.16:122,0,90	0/0:10,0:10:5.78:0,6,54	0/1:12,0:8:1.52:96,0,2	1/1:11,5:16:20.49:225,20,0	1/1:4,18:21:5.99:49,6,0	0/1:17,3:17:14.09:203,0,14	0/0:8,0:8:2.80:0,3,13	0/1:13,1:13:46.48:57,0,46	1/1:13,6:19:23.62:195,24,0	1/1:12,0:12:29.96:327,30,0	1/1:12,5:15:36.45:378,36,0	1/1:4,0:4:10.78:76,11,0
chr10	55320998	.	CTGTGTG	C	885.89	PASS	AC=18;AF=0.375;AN=48;BaseQRankSum=2.186;DP=467;FS=1.909;HRun=0;HaplotypeScore=117.6422;InbreedingCoeff=0.6326;MQ=46.38;MQ0=26;MQRankSum=-2.093;QD=7.38;ReadPosRankSum=0.701;VQSLOD=2.5220;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:23:6.49:0,6,117	1/1:10,0:9:2.67:16,3,0	./.	./.	0/0:18,0:17:6.02:0,6,146	0/0:28,0:27:0:0,0,1	./.	0/0:18,0:16:17.97:0,18,248	1/1:14,0:14:4.47:72,4,0	1/1:20,1:20:17.86:221,18,0	0/0:18,1:19:0.47:0,0,2	0/0:21,0:21:6.02:0,6,95	0/0:13,0:13:13.85:0,14,151	0/0:17,0:16:14.66:0,15,156	0/0:18,0:17:0.47:0,0,1	0/0:14,0:14:12.01:0,12,147	0/0:23,0:23:24.08:0,24,449	0/0:9,0:8:6.02:0,6,125	1/1:8,1:7:6.02:89,6,0	1/1:15,1:16:13.95:192,14,0	./.	0/0:23,0:19:3.01:0,3,63	0/0:7,0:7:3.01:0,3,47	0/0:14,0:13:12.04:0,12,253	1/1:17,0:17:2.11:8,2,0	1/1:10,1:11:11.97:162,12,0	1/1:18,0:16:21:261,21,0	1/1:4,0:4:2.91:21,3,0
chr10	55321025	.	TGTGTGTGAGA	T	2801.93	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=-0.508;DP=401;FS=10.003;HRun=0;HaplotypeScore=118.9463;InbreedingCoeff=0.2715;MQ=45.28;MQ0=20;MQRankSum=1.709;QD=11.30;ReadPosRankSum=0.155;VQSLOD=1.6955;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:25:81.22:109,0,81	1/1:3,0:6:1.30:4,1,0	0/0:7,0:2:3.48:0,3,53	0/0:13,0:5:12.44:0,12,140	0/0:15,0:14:6.49:0,6,146	0/0:9,11:19:0.47:0,0,1	1/1:14,0:14:15.03:244,15,0	0/0:16,0:16:35.95:0,36,496	1/1:5,11:17:4.49:72,4,0	1/1:13,0:13:29.90:512,30,0	0/0:10,0:18:1.89:0,2,3	0/1:18,0:18:56.96:62,0,57	0/1:14,0:14:21.86:22,0,348	0/0:12,0:11:18.03:0,18,294	0/0:5,11:15:0.89:0,1,2	0/0:12,0:12:18.71:0,19,259	0/1:22,0:21:40.10:40,0,347	0/1:10,0:9:99:109,0,122	1/1:5,0:4:6.86:124,7,0	1/1:16,1:17:26.67:392,27,0	1/1:17,0:17:14.40:209,14,0	0/0:24,0:20:3.57:0,4,64	0/1:5,0:5:32.72:66,0,33	0/1:17,0:16:99:143,0,194	1/1:5,7:12:2.10:8,2,0	1/1:11,0:9:20.96:283,21,0	1/1:11,3:12:21.01:378,21,0	1/1:5,0:5:11.94:197,12,0
chr10	55321029	.	TGTGAGA	T	2813.88	PASS	AB=1.000;AC=33;AF=0.589;AN=56;BaseQRankSum=1.009;DP=391;FS=6.941;HRun=0;HaplotypeScore=102.9494;InbreedingCoeff=0.2460;MQ=44.91;MQ0=19;MQRankSum=2.995;QD=10.82;ReadPosRankSum=2.197;VQSLOD=1.9088;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:23:1.56:182,0,2	1/1:6,0:5:1.16:3,1,0	0/0:8,0:2:3.48:0,3,53	0/0:17,0:5:12.44:0,12,140	0/0:17,0:16:5.99:0,6,48	0/0:19,0:18:0:0,0,0	1/1:14,0:14:18.04:245,18,0	0/0:16,0:16:26.80:0,27,343	1/1:16,0:16:4.99:36,5,0	1/1:10,2:12:29.61:394,30,0	0/0:14,1:17:0.47:0,0,2	1/1:17,0:17:10.79:107,11,0	0/1:13,0:13:99:195,0,100	0/1:12,0:11:13.97:14,0,54	0/0:15,0:14:0.47:0,0,1	0/1:11,0:11:38.01:38,0,74	0/1:22,0:21:70.10:84,0,70	0/1:9,0:8:25.91:132,0,26	1/1:6,0:5:11.88:121,12,0	1/1:16,1:17:27.74:293,28,0	1/1:17,0:17:14.59:210,15,0	0/0:22,0:18:2.85:0,3,20	1/1:5,0:5:6.89:79,7,0	0/1:18,0:17:36.49:234,0,36	1/1:10,1:11:2.52:16,3,0	1/1:10,0:8:20.49:191,20,0	1/1:11,0:11:20.90:248,21,0	1/1:4,0:4:11.99:153,12,0
chr10	55321031	.	TGAGA	T	2820.19	PASS	AB=0.914;AC=35;AF=0.625;AN=56;BaseQRankSum=0.758;DP=390;FS=5.401;HRun=0;HaplotypeScore=95.9815;InbreedingCoeff=0.5114;MQ=44.11;MQ0=21;MQRankSum=3.323;QD=10.60;ReadPosRankSum=1.735;VQSLOD=2.5548;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:24,2:22:21.07:288,21,0	1/1:5,0:5:1.25:3,1,0	0/0:11,0:2:3.48:0,3,53	0/0:22,0:6:12.44:0,12,140	0/0:10,0:16:0:0,0,0	0/0:17,0:17:0:0,0,0	1/1:15,0:15:21.05:290,21,0	0/0:15,0:15:18.06:0,18,289	0/1:15,0:16:0:0,0,0	1/1:11,0:11:18.06:272,18,0	0/0:17,0:17:0:0,0,1	1/1:14,1:16:15.05:203,15,0	0/1:13,0:13:56.05:56,0,96	0/1:10,0:9:10.39:10,0,35	0/0:14,0:14:0.47:0,0,1	0/0:9,0:9:6.69:0,7,84	1/1:20,1:20:21.03:283,21,0	1/1:7,0:7:12.04:150,12,0	1/1:7,0:6:5.97:85,6,0	1/1:16,0:17:17.97:246,18,0	1/1:15,0:16:14.33:210,14,0	0/1:9,11:18:0.55:1,0,1	1/1:5,0:5:8.86:124,9,0	1/1:17,0:17:24.03:329,24,0	0/1:11,0:11:0:0,0,1	1/1:12,0:10:12.04:168,12,0	1/1:12,0:11:9.02:116,9,0	1/1:4,0:4:9.03:134,9,0
chr10	55322760	.	A	AACACACACAC	8775.73	PASS	AB=0.808;AC=45;AF=0.833;AN=54;BaseQRankSum=0.954;DP=526;FS=3.606;HRun=0;HaplotypeScore=175.4262;InbreedingCoeff=0.5313;MQ=66.04;MQ0=5;MQRankSum=-7.370;QD=21.46;ReadPosRankSum=-4.675;VQSLOD=3.1138;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:31,0:31:2.71:135,3,0	1/1:6,0:6:6:170,6,0	1/1:17,0:11:0.89:2,1,0	0/0:34,0:27:3.01:0,3,88	1/1:11,0:11:6.01:110,6,0	1/1:17,2:22:15.05:635,15,0	1/1:16,2:18:13.42:564,13,0	1/1:40,0:39:48.53:810,49,0	0/1:16,2:21:71.13:443,0,71	1/1:16,0:18:18.52:525,19,0	1/1:8,0:8:6:297,6,0	1/1:16,0:16:6.02:206,6,0	0/0:14,0:16:24.08:0,24,592	0/0:11,0:11:14.58:0,15,445	1/1:19,1:26:18.53:795,19,0	0/0:34,0:39:81.15:0,81,1971	1/1:21,0:21:18.06:696,18,0	1/1:9,0:7:8.06:255,8,0	1/1:20,0:18:22.73:692,23,0	1/1:8,3:12:6.02:239,6,0	1/1:23,0:23:11.92:167,12,0	./.	1/1:7,0:8:6.02:261,6,0	1/1:25,0:24:3.31:23,3,0	1/1:8,3:12:9.03:446,9,0	1/1:21,3:25:24.07:833,24,0	1/1:12,2:14:9.03:356,9,0	1/1:5,0:5:3.01:113,3,0
chr10	55322789	.	A	ACACACACACACACACC	9486.26	PASS	AB=0.976;AC=29;AF=0.518;AN=56;BaseQRankSum=7.154;DP=608;FS=24.235;HRun=0;HaplotypeScore=253.9827;InbreedingCoeff=-0.0848;MQ=53.44;MQ0=5;MQRankSum=-8.309;QD=20.76;ReadPosRankSum=-0.702;VQSLOD=2.4440;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:15,0:35:2.15:630,0,2	0/1:5,0:5:12.99:18,0,13	0/0:20,0:12:18.57:0,19,246	0/0:19,0:14:3.56:0,4,273	1/1:21,0:21:47.98:573,48,0	0/1:18,0:18:47.83:444,0,48	0/1:23,0:23:99:255,0,225	0/1:33,0:32:99:800,0,138	0/1:22,0:22:54.70:55,0,274	0/1:23,0:23:99:505,0,275	0/0:11,0:11:11.96:0,12,99	1/1:9,0:21:15.52:714,16,0	0/0:24,0:24:60.01:0,60,1163	0/0:24,0:24:53.42:0,53,992	0/1:23,0:23:96.88:247,0,97	0/0:52,0:52:99:0,144,3627	1/1:11,11:29:16.14:1593,16,0	1/1:12,0:10:23.98:511,24,0	0/1:29,0:28:99:397,0,352	0/1:10,0:9:37.89:112,0,38	0/1:29,0:28:92.62:93,0,189	1/1:16,0:16:20.93:378,21,0	1/1:6,7:15:6.49:442,6,0	1/1:25,0:23:26.99:426,27,0	0/1:10,0:10:12.92:232,0,13	0/1:28,0:28:99:848,0,233	0/1:22,0:21:99:135,0,328	0/1:8,0:8:60.86:77,0,61
chr10	55323193	.	T	TG	15714.93	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=-13.379;DP=663;FS=4.031;HRun=5;HaplotypeScore=67.8444;InbreedingCoeff=0.9991;MQ=85.83;MQ0=0;MQRankSum=-5.731;QD=32.47;ReadPosRankSum=2.312;VQSLOD=5.6715;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,38:45:99:1323,102,0	0/0:11,0:11:33.05:0,33,338	0/0:29,0:29:66.11:0,66,683	0/0:25,0:25:63.15:0,63,666	1/1:3,23:26:63.20:828,63,0	1/1:1,10:11:21.07:276,21,0	1/1:0,16:16:42.14:552,42,0	0/0:27,0:27:63.15:0,63,677	1/1:2,22:24:66.21:860,66,0	1/1:2,17:19:51.17:671,51,0	1/1:0,13:13:33.11:434,33,0	1/1:1,18:19:54.18:710,54,0	0/0:25,1:26:38.72:0,39,766	0/0:25,0:25:66.17:0,66,709	1/1:1,13:14:39.13:513,39,0	0/0:36,0:36:99:0,105,1128	1/1:4,24:28:72.23:947,72,0	1/1:3,22:25:60.20:789,60,0	1/1:3,20:23:60.18:773,60,0	1/1:1,19:20:45.15:591,45,0	1/1:3,41:44:99:1339,102,0	1/1:2,26:28:66.21:867,66,0	1/1:5,22:27:57.18:749,57,0	1/1:0,29:29:81.26:1066,81,0	1/1:1,22:23:48.16:631,48,0	1/1:4,18:22:54.16:692,54,0	1/1:1,16:16:51.17:671,51,0	1/1:0,11:11:33.11:434,33,0
chr10	55323693	.	AGATAAGGCTTT	A	21747.68	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=19.519;DP=675;FS=6.460;HRun=0;HaplotypeScore=245.1061;InbreedingCoeff=0.9951;MQ=82.01;MQ0=0;MQRankSum=-17.196;QD=75.78;ReadPosRankSum=3.072;VQSLOD=3.6625;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,111,5940	0/0:12,0:12:36.12:0,36,1981	0/0:22,0:22:60.19:0,60,2703	0/0:23,0:23:54.19:0,54,2708	0/0:35,0:35:99:0,102,5633	1/1:1,23:24:66.23:2307,66,0	1/1:6,11:17:30.10:1048,30,0	0/0:32,0:32:72.24:0,72,3588	1/1:3,24:27:63.22:2202,63,0	1/1:4,26:30:75.24:2423,75,0	1/1:1,16:17:45.15:1573,45,0	0/0:25,0:25:69.24:0,69,3917	0/0:23,0:23:69.24:0,69,3673	0/0:17,0:17:45.15:0,45,2503	1/1:3,15:18:39.13:1363,39,0	0/0:41,0:41:99:0,120,6444	0/0:28,0:28:78.25:0,78,4118	0/0:21,0:21:55.41:0,55,2760	1/1:3,14:17:42.11:1155,42,0	1/1:7,30:37:72.25:2344,72,0	1/1:1,8:9:12.04:419,12,0	0/0:22,0:22:60.21:0,60,3240	0/0:31,0:31:90.30:0,90,4841	0/0:19,0:19:57.20:0,57,3092	1/1:4,21:25:48.16:1677,48,0	1/1:5,21:26:66.19:2092,66,0	1/1:5,26:30:69.16:2412,69,0	1/1:2,7:9:21.07:734,21,0
chr10	55324003	.	A	AC	10528.05	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-14.332;DP=614;FS=12.994;HRun=2;HaplotypeScore=60.4158;InbreedingCoeff=0.9994;MQ=71.12;MQ0=0;MQRankSum=-3.829;QD=37.73;ReadPosRankSum=1.422;VQSLOD=4.3963;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:90.66:0,91,1182	0/0:16,0:16:45.14:0,45,557	0/0:14,0:15:25.08:0,25,438	0/0:22,0:22:60.39:0,60,655	0/0:20,0:20:57.18:0,57,706	1/1:1,17:18:48.16:691,48,0	1/1:0,31:31:78.26:1123,78,0	0/0:23,0:23:69.21:0,69,846	1/1:1,14:15:42.14:605,42,0	1/1:0,22:23:63.15:864,63,0	1/1:1,12:13:27.09:388,27,0	0/0:27,0:27:81.25:0,81,1004	0/0:15,0:15:42.13:0,42,520	0/0:13,0:13:36.11:0,36,446	1/1:1,30:31:90.30:1296,90,0	0/0:19,0:19:57.18:0,57,706	0/0:42,0:42:99:0,117,1437	0/0:16,0:16:42.13:0,42,521	1/1:2,18:20:57.17:794,57,0	1/1:0,25:25:66.22:949,66,0	1/1:1,40:41:99:1512,105,0	0/0:22,0:22:63.16:0,63,750	0/0:14,0:14:42.13:0,42,520	0/0:32,0:32:93.29:0,93,1152	1/1:0,15:16:39.09:538,39,0	1/1:1,18:19:54.18:775,54,0	1/1:1,16:16:42.14:604,42,0	1/1:0,10:10:27.09:389,27,0
chr10	55324775	.	A	ATGTGTGTGTG	8700.35	PASS	AB=0.875;AC=41;AF=0.759;AN=54;BaseQRankSum=1.278;DP=536;FS=1.653;HRun=0;HaplotypeScore=182.9002;InbreedingCoeff=0.5667;MQ=56.92;MQ0=7;MQRankSum=-4.685;QD=21.48;ReadPosRankSum=-1.674;VQSLOD=4.0098;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:13:0.72:83,1,0	1/1:15,0:13:6.02:245,6,0	0/0:23,0:15:3.01:0,3,60	0/0:20,0:12:2.85:0,3,89	0/0:18,0:18:0.03:0,0,0	1/1:20,1:22:19.48:655,19,0	1/1:21,0:20:15.98:482,16,0	0/1:30,0:35:15.57:16,0,124	1/1:20,0:18:14.67:598,15,0	1/1:20,0:20:28.34:1038,28,0	1/1:15,0:15:15.05:474,15,0	1/1:22,0:22:13.55:371,14,0	0/0:11,0:10:21.06:0,21,525	0/0:15,0:15:30.10:0,30,779	1/1:19,0:21:3.01:102,3,0	0/0:21,0:20:24.08:0,24,625	1/1:12,0:12:12.04:382,12,0	1/1:10,0:10:9.03:364,9,0	1/1:22,0:22:19.88:539,20,0	1/1:20,0:21:9:275,9,0	1/1:12,0:12:0.47:1,0,0	1/1:23,0:21:12.50:371,12,0	./.	1/1:19,0:18:2.83:85,3,0	1/1:17,0:16:6.96:238,7,0	1/1:31,0:28:51.13:1810,51,0	1/1:15,7:20:6.49:299,6,0	1/1:8,0:7:8.70:272,9,0
chr10	55324806	.	T	TGTGTGTGTGTG	6037.42	PASS	AB=0.805;AC=24;AF=0.444;AN=54;BaseQRankSum=-0.056;DP=412;FS=52.139;HRun=0;HaplotypeScore=153.5400;InbreedingCoeff=-0.3037;MQ=42.34;MQ0=7;MQRankSum=-2.239;QD=20.82;ReadPosRankSum=-2.115;VQSLOD=2.0161;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:11,0:12:12.88:79,0,13	0/1:9,0:8:8.55:271,0,9	0/0:10,0:4:9.03:0,9,133	0/0:17,0:6:18.06:0,18,304	1/1:10,0:16:0.88:2,1,0	0/1:16,0:19:69.53:529,0,70	0/1:15,0:16:99:372,0,104	0/0:19,0:19:22.25:0,22,517	0/1:9,0:11:44.26:547,0,44	0/1:10,0:14:99:413,0,307	0/1:5,0:10:20.55:473,0,21	1/1:15,0:21:15.51:465,16,0	0/0:15,0:15:42.43:0,42,867	0/0:18,0:18:54.12:0,54,1175	0/1:12,1:22:99:214,0,131	0/0:16,0:16:30.04:0,30,814	0/1:4,0:5:25.39:176,0,25	0/1:3,0:4:91.94:142,0,92	0/1:3,0:5:24.95:380,0,25	0/1:15,0:19:85.42:282,0,85	0/0:13,0:13:1.41:0,1,33	1/1:12,0:15:9.03:392,9,0	./.	1/1:9,0:9:0.33:1,0,0	0/1:16,0:19:99:237,0,149	0/1:22,0:25:99:753,0,501	0/1:17,0:14:94.57:95,0,110	0/1:4,0:6:56.58:216,0,57
chr10	55324807	.	TGAGA	T	607.38	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=0.584;DP=419;FS=3.203;HRun=0;HaplotypeScore=134.5516;InbreedingCoeff=0.2199;MQ=41.79;MQ0=8;MQRankSum=-1.118;QD=2.83;ReadPosRankSum=-1.547;VQSLOD=1.6711;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:12,0:11:0:0,0,0	1/1:4,5:8:1.35:19,1,0	0/0:10,0:4:3.01:0,3,46	0/0:18,0:6:11.54:0,12,70	0/1:16,0:16:0:0,0,0	0/1:19,0:19:20.38:20,0,76	0/0:16,0:15:11.73:0,12,216	1/1:7,11:18:31.60:379,32,0	0/0:13,0:11:13.42:0,13,149	0/0:15,0:15:18.49:0,18,295	0/0:11,0:11:6.02:0,6,139	0/0:22,0:22:3.33:0,3,12	0/0:14,0:14:26.78:0,27,536	0/0:17,0:18:34.93:0,35,708	0/1:22,0:21:16.96:17,0,166	1/1:16,1:16:9.03:138,9,0	1/1:6,0:6:3:26,3,0	0/1:3,0:4:14.03:42,0,14	0/0:9,0:8:14.54:0,15,82	0/1:19,0:19:13.80:14,0,126	0/0:13,0:13:2.33:0,2,61	0/1:18,0:16:0.01:0,0,0	0/1:14,0:12:0:0,0,0	0/1:12,0:11:0.02:0,0,0	0/1:20,0:19:77.56:78,0,89	0/0:28,0:25:11.46:0,11,390	0/0:17,0:14:14.88:0,15,250	0/1:7,0:6:19.47:19,0,131
chr10	55324816	.	G	GT	100.88	PASS	AB=0.952;AC=14;AF=0.250;AN=56;BaseQRankSum=8.216;DP=442;FS=48.104;HRun=0;HaplotypeScore=121.3681;InbreedingCoeff=0.0333;MQ=42.26;MQ0=10;MQRankSum=-5.994;QD=0.65;ReadPosRankSum=-3.310;VQSLOD=-0.3736;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:14:1.41:3,1,0	0/1:12,0:9:30.55:31,0,95	0/0:11,0:2:6.02:0,6,83	0/0:27,0:7:15.05:0,15,199	1/1:16,1:17:0.93:2,1,0	0/1:18,2:20:52.84:53,0,150	0/0:15,0:14:11.66:0,12,228	0/0:22,0:21:56.70:0,57,572	0/1:9,1:9:29.75:30,0,132	0/1:12,2:14:20.37:20,0,438	0/1:9,1:11:19.36:19,0,107	0/1:22,0:22:20.98:61,0,21	0/0:14,0:14:39.02:0,39,518	0/0:17,0:17:51.10:0,51,670	0/0:20,0:20:17.31:0,17,210	0/0:18,0:17:29.76:0,30,324	0/0:6,0:6:3:0,3,25	0/1:4,0:4:5.42:5,0,82	0/0:8,0:8:11.49:0,11,212	0/0:19,0:20:14.99:0,15,337	0/0:14,0:14:3.95:0,4,79	0/0:21,0:19:1.75:0,2,6	1/1:18,0:16:0.94:2,1,0	0/1:11,0:11:0.33:0,0,0	0/0:22,1:22:31.75:0,32,383	0/0:26,0:24:40.26:0,40,800	0/0:18,0:16:9.20:0,9,227	0/0:6,0:5:6.20:0,6,147
chr10	55324824	.	GAGAGAGAGAGAGAA	G	306.75	PASS	AB=0.995;AC=20;AF=0.357;AN=56;BaseQRankSum=2.627;DP=485;FS=1.617;HRun=0;HaplotypeScore=186.8430;InbreedingCoeff=0.2904;MQ=44.44;MQ0=14;MQRankSum=-5.070;QD=1.38;ReadPosRankSum=-5.118;VQSLOD=1.4067;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:12:5.54:25,6,0	0/0:12,0:9:8.99:0,9,238	0/0:18,0:3:6.02:0,6,78	0/0:36,0:8:6.46:0,6,210	1/1:15,1:17:8.33:81,8,0	0/1:22,0:22:26.22:26,0,690	0/0:15,0:14:14.29:0,14,739	0/0:29,0:28:70.02:0,70,2060	0/1:14,0:12:25.15:25,0,434	0/1:17,0:17:2.41:2,0,1037	0/0:11,0:11:9.03:0,9,447	0/1:23,0:23:24.61:26,0,25	0/0:14,0:14:32.49:0,32,1816	0/0:19,0:19:50.65:0,51,2331	0/1:21,0:20:0.72:1,0,762	0/0:17,0:16:24.07:0,24,765	1/1:7,0:7:2.99:23,3,0	1/1:5,0:5:8.78:69,9,0	0/1:12,0:11:78.25:78,0,152	0/0:21,0:21:6.86:0,7,1187	0/1:15,0:15:14.40:14,0,350	0/1:22,1:21:2.17:2,0,3	1/1:18,1:17:2.94:54,3,0	1/1:14,1:15:6.02:45,6,0	0/0:22,0:21:33.85:0,34,1256	0/0:25,0:23:47.55:0,48,1999	0/0:17,0:15:19:0,19,916	0/0:6,0:5:12.04:0,12,582
chr10	55324826	.	GAGAGAGAGAGAA	G	1111.26	PASS	AB=1.000;AC=24;AF=0.429;AN=56;BaseQRankSum=-0.268;DP=488;FS=6.291;HRun=0;HaplotypeScore=173.5962;InbreedingCoeff=0.3003;MQ=44.90;MQ0=14;MQRankSum=-5.148;QD=4.32;ReadPosRankSum=-5.603;VQSLOD=0.3700;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:3,10:12:6.02:115,6,0	0/0:12,0:9:8.95:0,9,188	0/0:18,0:3:6:0,6,56	0/0:38,0:9:15.75:0,16,207	1/1:11,6:18:8.82:94,9,0	0/1:23,0:23:46.77:47,0,534	0/1:15,0:14:7.92:8,0,591	0/0:30,0:29:36.26:0,36,1562	0/1:14,0:12:50.84:51,0,343	0/1:18,0:18:69.37:69,0,825	0/0:11,0:11:9.03:0,9,369	1/1:8,14:22:13.68:274,14,0	0/0:14,0:14:32.37:0,32,1562	0/0:19,0:19:50.61:0,51,1997	0/1:20,0:19:3.79:4,0,580	0/0:16,0:15:24.07:0,24,589	1/1:7,0:7:3.01:49,3,0	1/1:5,0:5:9.48:122,9,0	0/1:13,0:12:94.91:109,0,95	0/0:21,0:21:7.04:0,7,931	0/1:14,0:14:14.28:14,0,270	1/1:8,15:21:5.73:89,6,0	1/1:7,12:17:11.97:161,12,0	1/1:14,1:15:6.08:45,6,0	0/0:22,0:21:34.16:0,34,973	0/0:25,0:23:21.16:0,21,1572	0/1:18,0:16:44.85:45,0,729	0/0:5,0:4:12.04:0,12,479
chr10	55324834	.	GAGAA	G	2558.94	PASS	AB=0.967;AC=32;AF=0.571;AN=56;BaseQRankSum=-0.469;DP=516;FS=12.372;HRun=0;HaplotypeScore=134.4903;InbreedingCoeff=-0.1236;MQ=49.60;MQ0=14;MQRankSum=-3.723;QD=6.35;ReadPosRankSum=-4.389;VQSLOD=0.1505;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:12:5.88:36,6,0	0/0:12,0:10:11.78:0,12,88	0/0:23,0:5:9.89:0,10,88	0/0:45,0:11:0.10:0,0,52	1/1:15,1:16:8.77:51,9,0	0/1:23,0:23:3.17:163,0,3	0/1:14,0:13:35.54:36,0,105	0/1:33,0:32:99:134,0,416	0/1:13,0:11:39.67:57,0,40	0/1:23,0:23:99:276,0,107	0/1:10,0:10:36.87:37,0,77	1/1:22,0:22:22.71:124,23,0	0/0:16,0:16:42.51:0,43,735	0/0:17,0:17:31.17:0,31,780	0/1:19,1:19:72.93:116,0,73	0/1:9,6:14:78.96:79,0,116	1/1:7,0:7:3.01:33,3,0	1/1:5,0:5:11.97:110,12,0	1/1:18,0:17:45.60:321,46,0	0/1:22,1:23:34.18:182,0,34	0/1:16,0:16:21.65:81,0,22	1/1:22,0:20:5.66:36,6,0	1/1:17,1:17:11.75:71,12,0	1/1:16,0:16:8.82:68,9,0	0/1:20,2:21:39.01:263,0,39	0/1:24,0:23:99:149,0,160	0/1:19,0:17:99:142,0,112	0/1:11,0:10:58.01:169,0,58
chr10	55325615	.	AT	A	6316.20	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=7.986;DP=492;FS=2.520;HRun=8;HaplotypeScore=50.7446;InbreedingCoeff=0.9877;MQ=66.39;MQ0=1;MQRankSum=3.091;QD=24.29;ReadPosRankSum=1.108;VQSLOD=5.5899;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:51.16:0,51,616	0/0:5,0:5:15.05:0,15,181	0/0:11,0:10:24.07:0,24,282	0/0:7,0:7:12.04:0,12,145	0/0:23,0:23:60.18:0,60,725	1/1:2,17:19:51.08:493,51,0	1/1:3,13:16:30.04:290,30,0	0/0:32,0:32:52.21:0,52,368	1/1:2,12:14:33.05:319,33,0	1/1:3,16:19:48.08:464,48,0	1/1:2,28:30:81.03:763,81,0	0/0:11,0:11:33.09:0,33,387	0/0:12,0:12:30.08:0,30,351	0/0:20,0:20:54.17:0,54,652	1/1:0,25:25:63.10:608,63,0	0/0:20,0:20:60.18:0,60,725	0/0:21,0:21:63.17:0,63,747	0/0:17,0:17:45.14:0,45,544	1/1:4,14:18:42.07:406,42,0	1/1:2,26:28:72.11:695,72,0	1/1:1,4:5:12.02:116,12,0	0/0:6,0:6:18.06:0,18,217	0/0:16,0:16:42.12:0,42,496	0/0:11,0:11:30.09:0,30,362	1/1:0,26:26:72.12:695,72,0	1/1:0,21:21:63.08:599,63,0	1/1:5,17:22:45.06:435,45,0	1/1:1,16:17:45.07:435,45,0
chr10	55326699	.	AG	A	8110.08	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=10.130;DP=569;FS=3.275;HRun=2;HaplotypeScore=60.2489;InbreedingCoeff=0.9947;MQ=68.97;MQ0=1;MQRankSum=1.315;QD=32.97;ReadPosRankSum=1.810;VQSLOD=4.9611;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,112,1692	0/0:7,0:7:21.07:0,21,302	0/0:22,0:14:32.43:0,32,337	0/0:17,0:16:36.47:0,36,512	0/0:39,0:39:90.32:0,90,1326	1/1:0,20:20:48.16:621,48,0	1/1:0,22:22:48.16:621,48,0	0/0:20,0:20:60.17:0,60,797	1/1:1,14:15:33.11:425,33,0	1/1:0,28:28:84.25:1054,84,0	1/1:0,21:21:57.14:716,57,0	0/0:12,0:12:36.12:0,36,513	0/0:23,0:23:66.18:0,66,887	0/0:8,0:8:24.08:0,24,344	1/1:0,11:11:30.10:388,30,0	0/0:12,0:11:33.11:0,33,472	0/0:27,0:27:81.22:0,81,1123	0/0:27,0:27:78.19:0,78,1034	1/1:2,26:28:78.21:958,78,0	1/1:0,13:13:38.97:446,39,0	1/1:0,5:5:12.04:155,12,0	0/0:16,0:16:45.15:0,45,646	0/0:23,0:23:66.18:0,66,878	0/0:26,0:26:72.21:0,72,998	1/1:0,23:23:48.15:620,48,0	1/1:0,28:28:81.20:1001,81,0	1/1:0,16:16:48.11:599,48,0	1/1:3,13:16:42.11:505,42,0
chr10	55329377	.	G	GCACA	4990.57	PASS	AB=0.652;AC=43;AF=0.860;AN=50;BaseQRankSum=0.760;DP=520;FS=7.467;HRun=0;HaplotypeScore=123.1133;InbreedingCoeff=0.5686;MQ=60.91;MQ0=11;MQRankSum=-1.992;QD=12.51;ReadPosRankSum=-3.974;VQSLOD=2.4608;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,11:38:32.17:604,32,0	0/0:3,0:10:15.02:0,15,139	./.	./.	1/1:4,1:5:5.85:85,6,0	1/1:7,0:10:6.02:104,6,0	1/1:17,0:20:3.01:53,3,0	1/1:22,0:22:24.08:361,24,0	1/1:15,0:21:24.55:436,25,0	1/1:13,0:13:12.04:222,12,0	./.	1/1:9,8:21:11.51:167,12,0	0/0:17,0:17:21.07:0,21,328	0/0:21,0:21:45.15:0,45,703	1/1:16,1:29:17.99:278,18,0	0/1:7,1:14:27.54:110,0,28	1/1:17,0:23:8.76:119,9,0	1/1:12,2:15:12.74:371,13,0	1/1:13,0:12:12.90:174,13,0	1/1:7,0:7:3.01:51,3,0	1/1:28,0:27:12.02:168,12,0	1/1:4,1:10:5.75:83,6,0	1/1:1,5:9:17.79:368,18,0	1/1:23,13:40:26.78:530,27,0	1/1:11,0:14:5.05:58,5,0	1/1:12,0:16:19.85:282,20,0	1/1:14,0:24:18.47:268,18,0	1/1:1,0:4:6.02:96,6,0
chr10	55330797	.	TACACACAC	T	1053.82	PASS	AB=0.818;AC=15;AF=0.278;AN=54;BaseQRankSum=0.317;DP=686;FS=0.882;HRun=0;HaplotypeScore=190.5634;InbreedingCoeff=0.4876;MQ=60.43;MQ0=14;MQRankSum=-5.266;QD=4.68;ReadPosRankSum=2.560;VQSLOD=2.7654;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:30,18:48:5.30:93,5,0	0/0:12,0:14:18.05:0,18,404	./.	0/0:45,0:27:3.01:0,3,42	1/1:6,15:23:5.74:95,6,0	0/0:17,0:17:6.47:0,6,73	0/0:31,0:32:39.02:0,39,879	0/0:22,0:22:1.22:0,1,3	0/0:35,0:33:23.11:0,23,581	0/0:19,0:20:39.12:0,39,742	0/0:14,0:14:12.04:0,12,295	1/1:12,20:32:23.74:512,24,0	0/0:20,0:27:69.20:0,69,1769	0/1:18,0:19:24.16:24,0,707	0/0:24,0:25:11.97:0,12,148	0/0:7,0:16:15.05:0,15,543	1/1:15,11:27:3.01:56,3,0	0/1:6,10:16:99:209,0,102	0/0:22,0:21:31:0,31,558	0/0:19,0:19:30.55:0,31,654	0/0:53,0:53:70.92:0,71,1155	1/1:8,14:21:3.48:58,3,0	1/1:12,8:19:2.57:51,3,0	0/1:14,2:16:26.92:116,0,27	0/0:17,0:18:15.05:0,15,372	0/0:22,0:22:39.12:0,39,977	0/0:17,0:18:36.09:0,36,768	0/0:3,0:3:9.03:0,9,266
chr10	55330834	.	A	ACACACACT	7403.32	PASS	AB=0.761;AC=24;AF=0.444;AN=54;BaseQRankSum=-5.755;DP=766;FS=0.748;HRun=0;HaplotypeScore=196.8036;InbreedingCoeff=0.8564;MQ=61.00;MQ0=18;MQRankSum=0.847;QD=20.51;ReadPosRankSum=-0.849;VQSLOD=3.8219;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:44:50.92:0,51,436	0/1:13,0:13:63.13:189,0,63	0/0:31,0:15:31.24:0,31,293	0/0:44,0:25:51.22:0,51,523	0/0:26,0:25:20.77:0,21,203	0/1:2,0:22:0:1,0,0	1/1:35,0:36:30.88:697,31,0	0/0:20,0:19:38.90:0,39,352	1/1:8,32:48:18.04:598,18,0	1/1:6,18:31:72.68:1028,73,0	1/1:19,0:19:35.90:338,36,0	0/0:37,0:37:65.41:0,65,672	0/0:36,0:36:55.92:0,56,1274	0/0:22,0:22:56.17:0,56,722	./.	0/0:21,0:20:38.98:0,39,388	0/0:28,0:28:38.89:0,39,349	0/0:18,0:18:8.95:0,9,298	1/1:24,0:24:36.87:649,37,0	1/1:18,0:19:38.84:466,39,0	1/1:67,0:66:98.17:1270,98,0	0/0:21,0:20:14.56:0,15,113	0/0:16,0:15:23.26:0,23,190	0/0:15,0:14:22.91:0,23,183	1/1:3,12:21:4.30:123,4,0	1/1:2,21:30:80.56:1173,81,0	1/1:15,0:15:44.93:534,45,0	1/1:0,7:10:9.03:339,9,0
chr10	55332272	.	T	TTG	1613.92	PASS	AB=1.000;AC=28;AF=0.519;AN=54;BaseQRankSum=-2.007;DP=424;FS=4.051;HRun=0;HaplotypeScore=174.8295;InbreedingCoeff=0.2803;MQ=52.95;MQ0=2;MQRankSum=1.541;QD=5.38;ReadPosRankSum=-3.221;VQSLOD=2.4041;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:46,0:46:25.77:180,26,0	1/1:5,0:5:2.40:27,2,0	0/0:15,0:5:1.35:0,1,49	0/1:12,0:7:12.64:13,0,23	1/1:22,0:22:0.51:59,1,0	1/1:17,0:17:3:25,3,0	0/0:16,0:16:3.57:0,4,13	1/1:10,15:27:51.09:684,51,0	0/1:15,0:15:10.56:41,0,11	0/0:21,0:21:26.63:0,27,157	0/1:15,0:15:18.33:18,0,23	1/1:15,0:15:13.88:90,14,0	0/0:10,0:10:24.08:0,24,297	0/0:8,0:8:24.07:0,24,286	0/0:6,0:6:2.95:0,3,25	0/0:10,0:10:18.06:0,18,223	1/1:14,0:14:27.03:290,27,0	1/1:13,0:13:19.18:140,19,0	0/1:16,0:16:5.86:6,0,56	0/0:14,0:14:2.83:0,3,24	./.	1/1:11,0:11:9.78:80,10,0	0/1:14,0:14:0:0,0,0	0/1:12,0:12:3.59:39,0,4	1/1:16,0:16:2.99:23,3,0	0/0:13,0:13:19.29:0,19,96	0/1:20,0:20:12.51:13,0,56	0/1:10,0:10:49.47:55,0,49
chr10	55332287	.	G	GTGT	417.44	PASS	AB=0.827;AC=10;AF=0.179;AN=56;BaseQRankSum=0.502;DP=401;FS=17.202;HRun=0;HaplotypeScore=172.3691;InbreedingCoeff=0.0338;MQ=56.02;MQ0=3;MQRankSum=0.244;QD=2.98;ReadPosRankSum=-0.389;VQSLOD=1.6773;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:29,11:39:26.01:26,0,95	0/0:4,0:4:11:0,11,98	0/1:16,0:5:19.79:20,0,96	0/0:16,0:10:13.49:0,13,206	0/0:18,2:22:7.97:0,8,78	0/0:20,0:20:4.23:0,4,30	0/0:20,0:20:12.80:0,13,83	0/0:20,0:20:57.49:0,57,546	0/1:13,0:13:15.36:15,0,17	0/0:20,0:20:26.47:0,26,314	0/0:14,0:14:8.21:0,8,71	0/1:7,5:13:0.51:65,0,1	0/0:10,0:10:30.10:0,30,555	0/0:8,0:8:24.06:0,24,399	0/0:8,0:8:4.81:0,5,51	0/0:8,0:8:18.06:0,18,335	1/1:7,5:14:1.05:265,1,0	0/1:10,2:12:69.10:73,0,69	0/0:15,0:15:43.25:0,43,291	0/0:12,0:12:2.60:0,3,31	0/1:10,0:10:0:0,0,0	0/1:4,3:10:14.70:45,0,15	0/0:10,3:12:2.23:0,2,13	0/1:6,2:12:18.20:39,0,18	0/0:11,0:11:2.80:0,3,13	0/0:14,0:14:37.18:0,37,258	0/0:17,0:17:20.20:0,20,152	0/0:8,0:8:17.68:0,18,139
chr10	55332289	.	TGG	T	2218.88	PASS	AB=0.993;AC=36;AF=0.643;AN=56;BaseQRankSum=3.687;DP=393;FS=2.708;HRun=3;HaplotypeScore=158.1534;InbreedingCoeff=0.3656;MQ=55.90;MQ0=3;MQRankSum=-3.730;QD=6.66;ReadPosRankSum=-3.005;VQSLOD=-0.7278;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:39,0:38:29.43:210,29,0	0/0:4,0:4:11.20:0,11,99	0/1:14,0:5:21.05:27,0,21	0/1:17,0:10:1.23:1,0,108	0/1:21,0:21:6.29:74,0,6	1/1:17,2:19:1.96:35,2,0	1/1:20,0:20:17.93:145,18,0	0/0:19,0:19:57.15:0,57,1007	1/1:12,1:13:14.99:132,15,0	1/1:18,2:20:58.79:532,59,0	1/1:13,0:13:8.50:64,9,0	0/1:12,0:12:5.40:18,0,5	0/0:10,0:10:30.08:0,30,502	0/0:7,0:7:18.06:0,18,340	1/1:8,0:8:8.68:55,9,0	0/0:8,0:8:21.05:0,21,279	0/1:14,0:14:9.55:10,0,28	0/1:12,0:12:34.82:38,0,35	1/1:14,0:14:41.80:341,42,0	1/1:12,0:12:2.92:17,3,0	0/1:10,0:10:0:0,0,0	0/1:10,0:10:10.86:16,0,11	1/1:13,0:12:5.99:49,6,0	0/0:12,0:12:0.94:0,1,2	1/1:11,0:11:3:25,3,0	1/1:14,0:14:38.38:306,38,0	1/1:16,1:17:20.86:169,21,0	1/1:8,0:8:17.88:132,18,0
chr10	55332302	.	GCGCGCGCGCGCATA	G	1229.01	PASS	AB=0.886;AC=9;AF=0.173;AN=52;BaseQRankSum=2.982;DP=383;FS=12.651;HRun=0;HaplotypeScore=193.1003;InbreedingCoeff=0.1392;MQ=61.97;MQ0=5;MQRankSum=-1.789;QD=12.54;ReadPosRankSum=1.557;VQSLOD=1.9441;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:25,3:27:9.03:290,9,0	0/0:1,0:1:3.01:0,3,42	0/0:20,0:8:11.14:0,11,221	0/0:28,0:15:24.05:0,24,319	0/1:15,0:15:41.49:89,0,41	0/0:19,0:19:5.05:0,5,182	0/0:19,0:19:3.01:0,3,36	0/0:24,0:24:66.23:0,66,2345	0/0:10,0:10:5.05:0,5,91	0/0:18,0:18:45.12:0,45,1762	0/0:15,0:15:8.16:0,8,344	0/1:7,1:8:17.62:56,0,18	0/0:9,0:9:27.02:0,27,1382	0/0:7,0:7:21.07:0,21,1098	0/0:7,0:7:9.03:0,9,516	0/0:4,0:4:9.03:0,9,443	0/1:14,2:16:99:237,0,336	0/1:7,2:9:99:367,0,145	0/0:17,0:17:45.14:0,45,1061	0/0:14,0:14:1.61:0,2,174	./.	0/1:8,2:10:4.06:278,0,4	./.	1/1:12,0:12:3.01:46,3,0	0/0:12,0:12:3.01:0,3,170	0/0:16,0:16:39.12:0,39,1401	0/0:14,0:14:9.03:0,9,318	0/0:10,0:10:12.51:0,13,556
chr10	55332308	.	GCGCGCATATGTGCACGCGCGCGCGTGCA	G	2030.83	PASS	AB=0.844;AC=14;AF=0.269;AN=52;BaseQRankSum=3.314;DP=414;FS=4.013;HRun=0;HaplotypeScore=246.1374;InbreedingCoeff=0.4875;MQ=61.70;MQ0=6;MQRankSum=-4.287;QD=17.97;ReadPosRankSum=1.519;VQSLOD=1.7724;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:22,18:39:9.03:428,9,0	1/1:1,0:1:3.01:45,3,0	0/0:20,0:7:12.88:0,13,195	0/0:35,0:18:22.45:0,22,330	1/1:12,5:17:3.01:223,3,0	0/0:18,0:18:5.05:0,5,361	0/0:26,0:26:0.47:0,0,1	0/0:23,0:23:54.16:0,54,1194	0/0:12,0:12:2:0,2,6	0/0:21,0:21:17:0,17,2710	0/0:12,0:12:5.92:0,6,673	1/1:8,0:8:5.23:93,5,0	0/0:9,0:9:24.08:0,24,1947	0/0:9,0:9:21.07:0,21,1894	0/0:7,0:7:9.03:0,9,1051	0/0:3,0:3:6.02:0,6,429	0/1:16,0:16:13.37:406,0,13	0/1:6,5:11:7.17:581,0,7	0/0:17,0:17:19.15:0,19,1484	0/0:15,0:15:2.15:0,2,352	./.	1/1:10,0:10:8.96:383,9,0	./.	1/1:10,0:10:2.98:21,3,0	0/0:12,0:12:3.01:0,3,346	0/0:16,0:16:22.68:0,23,2529	0/0:15,0:15:8.55:0,9,182	0/0:10,0:10:10.28:0,10,740
chr10	55332310	.	GCGCATATGTGCACGCGCGCGCGTGCA	G	2325.71	PASS	AB=0.967;AC=18;AF=0.346;AN=52;BaseQRankSum=3.695;DP=407;FS=0.000;HRun=0;HaplotypeScore=228.6425;InbreedingCoeff=0.3170;MQ=62.40;MQ0=5;MQRankSum=-5.563;QD=12.37;ReadPosRankSum=1.207;VQSLOD=2.4296;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:39,0:38:9.03:453,9,0	1/1:1,0:1:3.01:58,3,0	0/0:19,0:7:13.54:0,14,215	0/0:35,0:18:18.55:0,19,381	1/1:17,0:17:3.01:186,3,0	0/0:16,0:16:5.05:0,5,338	0/1:26,0:26:0:0,0,0	0/0:22,0:22:54.17:0,54,1391	0/1:13,0:13:1.07:10,0,1	0/1:20,0:20:43.19:43,0,2494	0/0:11,0:11:5.92:0,6,626	1/1:8,0:8:6.02:149,6,0	0/0:8,0:8:24.08:0,24,1908	0/0:10,0:10:27.06:0,27,2077	0/0:8,0:8:9.03:0,9,984	0/0:3,0:3:6.02:0,6,418	0/1:12,4:16:48.90:468,0,49	0/1:11,0:11:24.28:646,0,24	0/1:17,0:17:2.87:3,0,1510	0/0:16,0:16:5.16:0,5,367	./.	1/1:10,0:10:8.96:438,9,0	./.	1/1:10,0:10:2.98:21,3,0	0/0:12,0:12:3.01:0,3,323	0/0:16,0:16:2.34:0,2,2552	0/0:14,0:14:8.32:0,8,168	0/0:9,0:9:2.17:0,2,684
chr10	55332313	.	C	CGCAT	2755.83	PASS	AC=26;AF=0.520;AN=50;BaseQRankSum=0.962;DP=399;FS=3.121;HRun=0;HaplotypeScore=136.8890;InbreedingCoeff=0.6380;MQ=64.35;MQ0=4;MQRankSum=-4.076;QD=17.33;ReadPosRankSum=0.906;VQSLOD=2.9835;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:34:5.79:0,6,52	1/1:1,0:1:3.01:32,3,0	0/0:19,0:7:8.68:0,9,143	0/0:33,0:18:5.62:0,6,178	0/0:16,0:16:2.99:0,3,25	1/1:1,8:16:3.01:69,3,0	0/0:3,0:27:0:0,0,0	0/0:25,0:25:66.19:0,66,1096	1/1:2,7:13:3.01:39,3,0	1/1:4,0:19:48.06:729,48,0	1/1:2,0:13:6:115,6,0	1/1:7,0:7:4.05:13,4,0	0/0:8,0:8:24.08:0,24,450	0/0:10,0:10:30.07:0,30,495	1/1:1,0:9:9.02:147,9,0	0/0:3,0:4:9.03:0,9,167	0/0:15,0:15:0.41:0,0,141	0/0:10,0:10:17.18:0,17,158	1/1:1,0:14:42.09:693,42,0	1/1:2,0:16:3.48:35,3,0	./.	0/0:7,0:7:6:0,6,53	./.	./.	1/1:3,0:12:3.01:54,3,0	1/1:3,0:17:42.08:732,42,0	1/1:0,0:11:6.01:72,6,0	1/1:0,0:11:12.04:197,12,0
chr10	55332326	.	GCGCGCGTGCA	G	592.15	PASS	AC=12;AF=0.240;AN=50;BaseQRankSum=4.938;DP=315;FS=1.216;HRun=0;HaplotypeScore=132.1088;InbreedingCoeff=0.6722;MQ=71.21;MQ0=2;MQRankSum=-4.982;QD=13.77;ReadPosRankSum=3.311;VQSLOD=2.4042;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:18,3:21:9.03:184,9,0	./.	0/0:18,0:6:8.88:0,9,61	0/0:33,0:17:19.23:0,19,252	1/1:6,0:6:3.01:72,3,0	0/0:15,0:15:5.05:0,5,161	0/0:28,0:28:21.07:0,21,1022	0/0:15,0:15:27.08:0,27,917	0/0:13,0:13:14.08:0,14,553	0/0:18,0:18:42.10:0,42,1759	0/0:13,0:13:8.69:0,9,457	1/1:0,1:1:0.47:1,0,0	0/0:5,0:5:15.05:0,15,734	0/0:8,0:8:21.07:0,21,1077	0/0:6,0:6:9.03:0,9,467	0/0:3,0:3:6.02:0,6,313	1/1:4,2:6:6.01:102,6,0	1/1:5,2:7:9.03:223,9,0	0/0:17,0:17:32.92:0,33,1178	0/0:15,0:15:4.60:0,5,210	0/0:17,0:17:9.03:0,9,437	1/1:0,2:2:6.02:149,6,0	./.	./.	0/0:10,0:10:6.02:0,6,313	0/0:16,0:16:45.15:0,45,1920	0/0:9,0:9:5.95:0,6,66	0/0:13,0:13:18.06:0,18,871
chr10	55332582	.	GA	G	14160.11	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=4.765;DP=476;FS=5.337;HRun=1;HaplotypeScore=53.5328;InbreedingCoeff=0.9858;MQ=88.45;MQ0=0;MQRankSum=-6.040;QD=37.66;ReadPosRankSum=5.731;VQSLOD=4.8850;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,35:35:96.32:1337,96,0	0/0:3,0:3:9.03:0,9,141	0/0:24,0:24:69.22:0,69,1021	0/0:16,1:16:35.48:0,35,502	1/1:0,25:25:72.24:998,72,0	1/1:0,23:23:63.21:876,63,0	1/1:0,17:17:36.12:503,36,0	0/0:21,0:21:63.20:0,63,930	1/1:0,16:16:48.16:661,48,0	1/1:0,22:22:66.16:878,66,0	1/1:3,11:14:42.13:569,42,0	1/1:0,10:10:21.07:294,21,0	0/0:12,0:12:36.12:0,36,563	0/0:11,0:11:30.10:0,30,469	1/1:0,17:17:48.16:667,48,0	0/0:12,0:12:36.11:0,36,538	1/1:0,27:27:75.25:1044,75,0	1/1:0,12:12:33.11:460,33,0	1/1:0,7:7:21.07:289,21,0	1/1:0,22:22:63.21:879,63,0	1/1:0,17:17:39.13:545,39,0	1/1:0,25:25:72.24:992,72,0	1/1:0,14:14:33.11:458,33,0	1/1:0,8:8:18.06:252,18,0	1/1:0,13:13:30.10:417,30,0	1/1:0,18:18:51.17:709,51,0	1/1:0,25:25:69.23:957,69,0	1/1:0,9:9:27.09:375,27,0
chr10	55332680	.	CAAA	C	7821.21	PASS	AB=0.944;AC=43;AF=0.768;AN=56;BaseQRankSum=2.918;DP=488;FS=4.072;HRun=13;HaplotypeScore=92.1786;InbreedingCoeff=0.8591;MQ=64.86;MQ0=6;MQRankSum=-1.875;QD=19.36;ReadPosRankSum=7.621;VQSLOD=3.5451;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,0:30:73.50:446,74,0	0/0:1,0:8:10.48:0,10,43	0/1:32,0:12:14.21:14,0,160	0/0:21,0:11:4.91:0,5,160	1/1:4,0:15:29.35:178,29,0	1/1:2,15:18:48.05:565,48,0	1/1:1,13:15:34.46:435,34,0	0/0:21,0:26:75.23:0,75,1313	1/1:3,8:11:19.32:252,19,0	1/1:4,26:30:78:914,78,0	1/1:1,15:16:36.05:438,36,0	1/1:1,0:14:35.30:214,35,0	0/0:11,0:12:36.03:0,36,599	0/0:8,0:8:24.07:0,24,383	1/1:5,18:23:39.03:474,39,0	0/0:7,0:8:22.32:0,22,378	1/1:5,0:22:44.07:268,44,0	1/1:0,0:11:20.57:125,21,0	1/1:4,11:16:31.34:367,31,0	1/1:4,16:20:39:474,39,0	1/1:0,5:6:11.95:127,12,0	1/1:1,1:18:44.17:286,44,0	1/1:4,0:19:35.23:214,35,0	1/1:2,0:17:37.57:231,38,0	1/1:2,21:24:43.45:544,43,0	1/1:3,17:20:51.09:601,51,0	1/1:5,9:14:30.08:365,30,0	1/1:0,8:9:22.43:289,22,0
chr10	55333328	.	CTTT	C	2576.05	PASS	AB=0.711;AC=24;AF=0.429;AN=56;BaseQRankSum=0.363;DP=537;FS=2.381;HRun=15;HaplotypeScore=74.2823;InbreedingCoeff=0.7881;MQ=55.82;MQ0=17;MQRankSum=-1.055;QD=11.30;ReadPosRankSum=2.626;VQSLOD=0.8085;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:30:26.74:0,27,345	0/0:4,0:10:7.94:0,8,30	0/0:50,0:9:4.71:0,5,57	0/0:34,0:6:11.59:0,12,98	0/0:14,0:28:41.85:0,42,437	1/1:5,15:21:18.12:252,18,0	1/1:3,8:12:6.40:108,6,0	0/0:18,0:24:40.11:0,40,503	1/1:2,8:10:17.36:176,17,0	1/1:9,9:19:26.47:244,26,0	1/1:8,10:18:23.55:231,24,0	0/0:4,0:4:2.96:0,3,19	0/0:20,0:20:32.02:0,32,344	0/0:15,0:15:23.72:0,24,215	1/1:5,13:18:30.03:321,30,0	0/0:6,0:6:14.96:0,15,209	0/0:13,0:37:40.49:0,40,621	0/0:12,0:19:43.57:0,44,573	1/1:11,17:28:48.12:495,48,0	1/1:6,6:11:8.96:100,9,0	0/1:4,3:7:7.22:88,0,7	0/0:4,0:4:2.98:0,3,21	0/0:5,0:7:9.03:0,9,141	0/0:5,0:10:9.50:0,10,129	0/1:8,5:13:0.08:0,0,1	1/1:12,11:23:27.05:266,27,0	1/1:9,11:21:15.98:174,16,0	1/1:5,20:25:32.28:327,32,0
chr10	55333341	.	TTTC	T	795.55	PASS	AB=0.977;AC=14;AF=0.250;AN=56;BaseQRankSum=2.909;DP=510;FS=5.993;HRun=0;HaplotypeScore=85.4686;InbreedingCoeff=-0.1647;MQ=52.38;MQ0=20;MQRankSum=-1.409;QD=3.68;ReadPosRankSum=5.914;VQSLOD=0.7797;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:32:31.67:0,32,298	0/0:8,0:8:11.42:0,11,50	0/0:48,0:8:18.29:0,18,127	0/0:42,0:8:15.10:0,15,96	0/0:20,0:20:6.84:0,7,272	0/1:23,0:23:50.26:50,0,59	0/1:13,0:12:7.17:44,0,7	0/0:22,0:22:22.78:0,23,442	0/1:13,0:13:40.07:40,0,74	0/1:17,0:17:42.92:43,0,85	0/1:17,1:18:45.58:81,0,46	0/0:3,0:3:2.92:0,3,24	0/0:17,0:17:12.38:0,12,260	0/0:12,0:12:23.68:0,24,254	0/1:17,2:19:24:133,0,24	0/0:5,0:5:10.52:0,11,155	0/0:33,0:31:47.12:0,47,462	0/0:24,0:21:32.87:0,33,554	0/1:23,1:24:70.64:141,0,71	0/1:9,0:8:33.44:41,0,33	0/1:9,0:9:25.49:25,0,49	0/0:4,0:2:3.01:0,3,34	0/0:10,0:10:20.13:0,20,159	0/0:12,0:10:12:0,12,122	0/1:9,0:9:11.48:11,0,39	0/1:17,0:17:70.13:86,0,70	0/1:20,2:22:71.10:71,0,147	1/1:23,0:23:29.97:186,30,0
chr10	55333674	.	ATATATAT	A	2853.05	PASS	AB=0.963;AC=34;AF=0.630;AN=54;BaseQRankSum=2.147;DP=189;FS=8.394;HRun=0;HaplotypeScore=83.7151;InbreedingCoeff=0.2563;MQ=50.47;MQ0=1;MQRankSum=-4.341;QD=23.39;ReadPosRankSum=-2.155;VQSLOD=1.7700;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:10,0:10:44.22:79,0,44	1/1:1,0:3:6.02:114,6,0	0/0:4,0:1:2.37:0,2,8	0/1:11,0:2:0:0,0,0	0/1:5,0:5:0.72:114,0,1	1/1:4,1:8:23.42:288,23,0	./.	0/0:45,0:45:99:0,112,1549	1/1:0,0:3:9.03:167,9,0	1/1:2,4:7:20.14:380,20,0	1/1:1,3:5:6.02:124,6,0	0/1:8,0:9:17.09:17,0,71	0/0:6,0:6:14.97:0,15,402	0/0:3,0:3:5.26:0,5,134	1/1:1,0:4:3.01:38,3,0	0/0:4,0:4:12.04:0,12,385	0/1:3,0:3:12.76:13,0,22	0/1:3,0:4:16.02:54,0,16	1/1:4,1:7:17.91:234,18,0	1/1:0,4:5:4.57:77,5,0	1/1:3,0:5:15:217,15,0	0/0:1,0:1:2.90:0,3,16	0/1:5,0:5:22.49:22,0,52	0/1:2,0:2:11.74:51,0,12	1/1:4,1:9:8.27:296,8,0	1/1:0,1:7:21.05:382,21,0	1/1:1,0:6:18.02:275,18,0	1/1:0,2:2:3.01:74,3,0
chr10	55334693	.	G	GA	8208.36	PASS	AB=1.000;AC=39;AF=0.696;AN=56;BaseQRankSum=-1.767;DP=525;FS=8.300;HRun=8;HaplotypeScore=127.5602;InbreedingCoeff=0.4702;MQ=73.63;MQ0=2;MQRankSum=0.114;QD=18.04;ReadPosRankSum=3.706;VQSLOD=3.6938;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:26:19.20:19,0,84	1/1:2,0:12:22.73:115,23,0	0/0:26,0:19:34.41:0,34,256	0/1:26,0:22:8.55:9,0,129	0/1:26,0:26:7.38:7,0,10	1/1:1,18:19:17.67:457,18,0	1/1:2,16:18:42.12:485,42,0	1/1:4,23:27:69.68:797,70,0	1/1:1,14:15:42.12:485,42,0	1/1:3,27:30:56.78:907,57,0	1/1:0,21:21:51.15:589,51,0	0/1:16,0:16:4.78:5,0,10	0/0:9,0:9:21.01:0,21,192	0/0:12,0:12:36.02:0,36,330	1/1:2,9:11:27.08:312,27,0	0/0:11,0:11:24:0,24,220	0/1:28,0:28:5.10:5,0,34	0/1:18,0:18:24.80:25,0,46	1/1:4,19:23:32.69:616,33,0	1/1:3,24:27:69.16:781,69,0	1/1:1,11:12:27.08:312,27,0	0/1:9,0:9:3.06:3,0,8	1/1:13,0:13:3.05:9,3,0	0/0:12,0:12:1.81:0,2,33	1/1:1,22:23:60.18:693,60,0	1/1:5,19:24:63.10:706,63,0	1/1:2,18:20:26.91:561,27,0	1/1:0,10:10:27.08:312,27,0
chr10	55334701	.	AT	A	3158.27	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=10.820;DP=530;FS=0.751;HRun=1;HaplotypeScore=139.6725;InbreedingCoeff=0.9182;MQ=68.65;MQ0=2;MQRankSum=-13.771;QD=17.94;ReadPosRankSum=0.959;VQSLOD=3.8644;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:12,19:30:57.76:531,58,0	0/0:12,0:12:31.26:0,31,167	0/0:21,1:17:19.15:0,19,374	0/1:15,0:13:11.70:12,0,145	1/1:7,21:29:76.40:706,76,0	0/0:22,0:22:52.24:0,52,325	0/0:17,0:17:46.24:0,46,262	0/0:28,0:28:70.35:0,70,457	0/0:14,0:14:40.17:0,40,210	0/0:32,0:32:78.14:0,78,504	0/0:24,0:24:63.84:0,64,400	1/1:7,10:17:35.10:299,35,0	0/0:7,0:7:21.05:0,21,262	0/0:12,0:12:36.12:0,36,478	0/0:13,0:13:36.82:0,37,240	0/0:9,0:9:27.09:0,27,358	1/1:8,20:28:64.14:586,64,0	1/1:5,11:16:43.96:368,44,0	0/0:23,0:23:32.36:0,32,319	0/0:26,0:26:54.37:0,54,387	0/0:12,0:12:28.74:0,29,157	1/1:1,8:9:26.36:223,26,0	1/1:5,11:16:44.93:391,45,0	1/1:5,9:14:26.76:251,27,0	0/0:22,0:22:57.47:0,57,303	0/0:23,0:23:46.08:0,46,323	0/0:21,0:21:57.79:0,58,341	0/0:15,0:15:43.83:0,44,279
chr10	55334702	.	TAAAAC	T	6429.81	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=2.889;DP=529;FS=4.479;HRun=0;HaplotypeScore=169.3335;InbreedingCoeff=0.9954;MQ=68.56;MQ0=2;MQRankSum=-15.159;QD=39.94;ReadPosRankSum=2.358;VQSLOD=4.7617;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:31,0:30:68.66:1052,69,0	0/0:12,0:12:33.10:0,33,879	0/0:21,0:17:38.23:0,38,801	0/0:16,0:13:14.04:0,14,284	1/1:29,0:29:78:1264,78,0	0/0:21,0:21:54.19:0,54,1478	0/0:17,0:17:48.16:0,48,1326	0/0:28,0:28:81.24:0,81,2227	0/0:14,0:14:42.13:0,42,1185	0/0:33,0:33:93.27:0,93,2558	0/0:22,0:22:66.23:0,66,1860	1/1:11,6:17:33.08:611,33,0	0/0:7,0:7:21.06:0,21,510	0/0:13,0:13:39.11:0,39,1163	0/0:13,0:13:39.12:0,39,1107	0/0:9,0:9:27.08:0,27,744	1/1:28,0:28:68.74:1101,69,0	1/1:15,0:15:45.08:739,45,0	0/0:24,0:24:66.54:0,67,1221	0/0:25,0:25:75.24:0,75,2109	0/0:12,0:12:30.09:0,30,779	1/1:10,0:10:27.05:462,27,0	1/1:17,0:17:39.06:686,39,0	1/1:14,0:14:32.84:516,33,0	0/0:21,0:21:60.21:0,60,1762	0/0:23,0:23:69.13:0,69,1910	0/0:21,0:21:60.14:0,60,1513	0/0:15,0:15:45.15:0,45,1227
chr10	55334703	.	AAAAC	A	4111.76	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=11.886;DP=531;FS=2.202;HRun=0;HaplotypeScore=166.4808;InbreedingCoeff=0.9236;MQ=68.47;MQ0=2;MQRankSum=-13.940;QD=22.84;ReadPosRankSum=3.238;VQSLOD=3.7907;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:11,19:29:39.38:628,39,0	0/0:12,0:12:33.11:0,33,855	0/0:22,0:17:41.41:0,41,816	0/1:16,0:13:8.26:8,0,236	1/1:11,19:30:71.75:878,72,0	0/0:21,0:21:54.19:0,54,1438	0/0:17,0:17:48.16:0,48,1265	0/0:27,0:27:81.28:0,81,2161	0/0:14,0:14:42.13:0,42,1090	0/0:33,0:33:96.33:0,96,2480	0/0:22,0:22:66.23:0,66,1757	1/1:7,10:17:32.92:368,33,0	0/0:7,0:7:18.06:0,18,461	0/0:13,0:13:39.13:0,39,1034	0/0:13,0:13:36.12:0,36,986	0/0:9,0:9:27.09:0,27,683	1/1:10,18:28:58.15:739,58,0	1/1:5,11:16:42.38:455,42,0	0/0:24,0:24:60.17:0,60,1229	0/0:25,0:25:72.25:0,72,1952	0/0:12,0:12:30.09:0,30,754	1/1:2,8:10:26.94:292,27,0	1/1:9,10:19:39.09:445,39,0	1/1:5,9:14:20.52:298,21,0	0/0:20,0:20:60.21:0,60,1625	0/0:24,0:24:69.24:0,69,1818	0/0:21,0:21:60.15:0,60,1444	0/0:15,0:15:45.15:0,45,1187
chr10	55335232	.	AATGT	A	1128.79	PASS	AB=0.950;AC=11;AF=0.196;AN=56;BaseQRankSum=7.106;DP=483;FS=5.227;HRun=0;HaplotypeScore=109.2472;InbreedingCoeff=-0.2467;MQ=62.52;MQ0=9;MQRankSum=1.901;QD=6.17;ReadPosRankSum=5.307;VQSLOD=1.6823;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:41.67:0,42,515	0/0:8,0:8:18.04:0,18,356	0/0:27,0:15:44.67:0,45,571	0/0:16,0:12:15.28:0,15,228	0/0:36,0:35:99:0,99,2103	0/1:19,0:19:99:148,0,108	0/1:11,0:11:84.96:102,0,85	0/0:29,0:28:62.08:0,62,1133	0/1:13,0:12:37.02:37,0,78	0/1:24,1:25:99:137,0,259	0/1:14,0:14:52.98:53,0,162	0/0:9,0:9:24.03:0,24,466	0/0:16,0:16:48.07:0,48,840	0/0:10,0:10:27.06:0,27,540	0/1:11,0:11:33.02:35,0,33	0/0:17,0:18:38.07:0,38,358	0/0:22,0:22:49.87:0,50,1256	0/0:11,0:11:26.96:0,27,401	0/1:10,6:16:99:151,0,170	0/0:16,0:16:22.64:0,23,262	0/1:23,0:22:99:178,0,161	0/0:23,0:23:63.10:0,63,1065	0/0:13,0:13:33.06:0,33,647	0/0:20,0:19:50.97:0,51,709	0/0:6,0:6:14.99:0,15,127	0/1:16,1:17:99:198,0,106	0/1:16,1:20:50.96:168,0,51	0/1:13,0:13:32.07:72,0,32
chr10	55335233	.	ATGTG	A	2911.46	PASS	AB=0.820;AC=24;AF=0.444;AN=54;BaseQRankSum=0.202;DP=484;FS=2.515;HRun=0;HaplotypeScore=103.0474;InbreedingCoeff=0.7912;MQ=61.31;MQ0=11;MQRankSum=0.350;QD=13.48;ReadPosRankSum=-0.272;VQSLOD=2.8881;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:11.76:0,12,214	0/0:9,0:9:15.05:0,15,265	0/0:27,0:15:9.03:0,9,134	0/0:15,0:11:6.02:0,6,89	0/0:39,0:38:75.26:0,75,1469	1/1:15,3:19:27.09:415,27,0	1/1:7,3:10:15.05:243,15,0	0/0:29,0:28:36.08:0,36,536	1/1:5,7:11:6.02:98,6,0	1/1:14,11:25:32.93:454,33,0	1/1:5,9:13:9.03:133,9,0	0/0:9,0:9:18.06:0,18,343	0/0:16,0:16:27.13:0,27,611	0/0:10,0:10:21.02:0,21,349	1/1:3,8:11:6.02:84,6,0	0/1:18,0:18:8.60:9,0,57	0/0:22,0:22:54.65:0,55,986	0/0:11,0:11:12.04:0,12,206	1/1:18,0:16:20.39:277,20,0	0/1:7,8:16:5.41:49,0,5	1/1:20,3:22:33.07:459,33,0	0/0:23,0:23:39.05:0,39,594	0/0:13,0:13:21.07:0,21,409	0/0:19,0:18:24.04:0,24,389	./.	1/1:16,0:17:33.09:477,33,0	1/1:17,2:20:18.02:235,18,0	1/1:3,10:13:12.04:186,12,0
chr10	55335256	.	TGTGTGAGA	T	1429.33	PASS	AB=0.933;AC=12;AF=0.214;AN=56;BaseQRankSum=-0.544;DP=441;FS=7.158;HRun=0;HaplotypeScore=108.7080;InbreedingCoeff=-0.0357;MQ=48.10;MQ0=27;MQRankSum=2.503;QD=8.46;ReadPosRankSum=-1.456;VQSLOD=1.3951;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:11.80:0,12,252	0/0:9,0:9:15.05:0,15,363	0/0:24,0:6:15.05:0,15,240	0/0:40,0:8:15.02:0,15,205	0/0:31,0:30:75.26:0,75,2171	0/1:14,1:15:5.61:190,0,6	0/1:12,0:12:26.83:27,0,165	0/0:22,0:20:4.58:0,5,555	0/0:12,0:11:11.39:0,11,174	0/1:16,0:15:70.17:283,0,70	0/1:12,0:11:23.56:24,0,105	0/0:9,0:9:18.06:0,18,524	0/0:12,0:12:30.14:0,30,1114	0/0:9,0:9:21.03:0,21,451	0/1:10,0:11:26.74:27,0,76	0/0:13,0:14:10.62:0,11,224	0/0:22,0:21:54.65:0,55,1354	0/0:7,0:7:15.05:0,15,284	0/1:16,0:14:37.28:246,0,37	0/1:15,0:15:5.31:5,0,184	1/1:20,0:16:9.09:366,9,0	0/0:18,0:18:39.05:0,39,666	0/0:11,0:11:21.07:0,21,542	0/0:14,0:13:24:0,24,610	0/0:4,0:4:0:0,0,0	0/1:19,0:20:93.11:370,0,93	0/1:10,10:20:21.02:21,0,171	0/1:10,0:11:19.53:20,0,42
chr10	55335260	.	T	TGA	599.47	PASS	AB=0.965;AC=16;AF=0.296;AN=54;BaseQRankSum=-2.456;DP=476;FS=2.019;HRun=0;HaplotypeScore=89.4323;InbreedingCoeff=0.1694;MQ=46.08;MQ0=24;MQRankSum=1.739;QD=2.79;ReadPosRankSum=-0.379;VQSLOD=1.9731;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:19,0:19:0:0,0,0	1/1:10,0:9:3.01:45,3,0	0/0:22,0:5:5.93:0,6,45	0/0:42,0:7:8.85:0,9,64	0/1:33,2:33:13.93:230,0,14	0/0:18,0:17:10.96:0,11,77	0/0:16,0:15:17.45:0,17,142	0/1:22,0:21:4.69:5,0,81	0/0:12,0:11:11.97:0,12,96	0/0:17,0:16:4.08:0,4,47	0/0:15,0:14:8.98:0,9,73	1/1:5,5:10:6.02:92,6,0	0/0:12,0:12:26.88:0,27,257	0/0:9,0:9:3.01:0,3,34	0/0:11,0:11:5.98:0,6,46	0/1:14,0:14:4.86:12,0,5	0/1:23,3:24:21.67:147,0,22	1/1:7,1:8:5.94:41,6,0	0/0:18,0:14:5.81:0,6,40	0/0:17,0:17:8.88:0,9,65	0/1:25,0:21:15.33:26,0,15	1/1:12,4:15:3.01:46,3,0	0/1:15,0:15:25.09:66,0,25	0/1:12,2:13:17.24:38,0,17	./.	0/0:18,0:18:16.70:0,17,119	0/0:19,0:20:14.49:0,14,99	0/0:11,0:11:11.81:0,12,85
chr10	55335318	.	AGGAGGG	A	289.69	PASS	AB=0.932;AC=6;AF=0.115;AN=52;BaseQRankSum=1.718;DP=393;FS=14.832;HRun=0;HaplotypeScore=54.6632;InbreedingCoeff=-0.1186;MQ=29.03;MQ0=49;MQRankSum=-3.132;QD=2.54;ReadPosRankSum=-0.171;VQSLOD=-0.4619;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:10,4:13:10.66:0,11,45	0/0:6,0:6:4.57:0,5,87	0/1:48,0:13:22.99:23,0,110	0/0:81,0:13:21.65:0,22,390	./.	0/0:9,0:7:10.26:0,10,157	0/0:14,0:11:7.83:0,8,46	0/1:28,3:23:99:190,0,984	0/0:8,0:8:8.82:0,9,130	0/0:13,0:10:26.18:0,26,541	0/0:10,0:6:3.01:0,3,99	0/0:6,0:3:2.74:0,3,44	0/0:6,0:4:9.02:0,9,163	0/0:4,0:2:3.01:0,3,99	0/1:5,0:4:4.55:5,0,16	0/0:4,0:3:6.49:0,6,116	0/1:5,3:8:87.15:115,0,87	0/1:3,0:3:41.62:42,0,46	0/0:14,0:7:15.13:0,15,317	0/0:9,0:5:6.01:0,6,95	0/0:24,0:15:17.83:0,18,415	0/0:3,0:1:1.25:0,1,3	0/0:8,2:8:3.01:0,3,65	0/0:9,1:8:0:0,0,0	0/0:11,0:6:3.01:0,3,77	0/1:18,0:16:27.94:28,0,718	0/0:7,0:6:12.04:0,12,291	./.
chr10	55335352	.	AGGAGGG	A	174.43	PASS	AB=0.981;AC=13;AF=0.271;AN=48;BaseQRankSum=-0.843;DP=301;FS=1.097;HRun=0;HaplotypeScore=43.4621;InbreedingCoeff=-0.1389;MQ=37.28;MQ0=37;MQRankSum=-1.137;QD=1.60;ReadPosRankSum=-1.201;VQSLOD=0.5669;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:19:24.41:24,0,26	0/0:8,0:7:5.23:0,5,39	0/0:28,0:5:9.16:0,9,112	0/0:40,0:6:5.19:0,5,76	./.	0/1:11,0:8:30.09:30,0,151	0/0:13,0:9:2.80:0,3,8	0/1:16,0:11:61.07:61,0,167	0/1:6,0:4:21.08:40,0,21	0/1:9,1:8:50.74:51,0,161	./.	./.	0/1:7,0:5:4.56:5,0,118	0/0:3,0:2:3.01:0,3,85	1/1:6,0:5:2.50:9,2,0	0/0:3,0:3:7.27:0,7,141	0/0:11,0:10:3.25:0,3,87	0/1:5,0:5:7.99:8,0,128	0/1:10,0:5:0.89:1,0,22	0/0:4,4:6:2.60:0,3,40	0/0:22,0:17:11.51:0,12,76	0/0:4,0:3:1.25:0,1,3	0/0:6,0:5:1.25:0,1,3	0/0:9,0:9:4.56:0,5,41	./.	0/1:12,0:10:7.16:7,0,62	0/0:9,0:6:2.66:0,3,25	1/1:3,0:1:3.01:59,3,0
chr10	55335358	.	G	GGAGA	2191.59	PASS	AB=1.000;AC=41;AF=0.732;AN=56;BaseQRankSum=-0.450;DP=306;FS=2.735;HRun=0;HaplotypeScore=59.6608;InbreedingCoeff=0.4793;MQ=45.04;MQ0=33;MQRankSum=1.015;QD=10.90;ReadPosRankSum=-1.015;VQSLOD=2.5977;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:16:23.64:348,24,0	0/1:5,0:7:0:0,0,0	0/0:31,0:5:3.47:0,3,28	0/0:40,0:9:1.60:0,2,75	1/1:10,0:6:2.74:24,3,0	1/1:14,1:12:3.01:68,3,0	1/1:4,2:6:3.01:72,3,0	0/0:10,0:6:3:0,3,28	1/1:5,2:7:3.01:52,3,0	1/1:9,0:8:8.99:91,9,0	1/1:4,0:2:3.01:60,3,0	0/0:2,0:1:3.01:0,3,46	0/0:10,0:8:16.59:0,17,218	0/0:4,0:3:3.01:0,3,46	1/1:6,0:6:9.02:182,9,0	0/0:6,0:6:15:0,15,191	1/1:2,8:10:3.01:72,3,0	1/1:5,0:5:11.23:78,11,0	1/1:7,1:2:6.02:126,6,0	1/1:9,0:7:2.74:13,3,0	1/1:9,9:16:15.05:343,15,0	1/1:5,0:4:5.88:83,6,0	1/1:7,0:6:2.74:25,3,0	1/1:9,1:9:5.99:95,6,0	1/1:9,0:6:6:51,6,0	1/1:4,8:14:20.97:323,21,0	1/1:8,0:5:9.02:153,9,0	1/1:4,0:2:5.97:87,6,0
chr10	55336349	.	A	AC	4488.76	PASS	AB=0.695;AC=26;AF=0.464;AN=56;BaseQRankSum=8.337;DP=449;FS=0.981;HRun=9;HaplotypeScore=65.0704;InbreedingCoeff=0.7083;MQ=74.80;MQ0=0;MQRankSum=1.368;QD=18.70;ReadPosRankSum=-0.036;VQSLOD=5.0003;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:62.95:0,63,541	0/1:1,5:6:6.87:115,0,7	0/0:17,0:16:13.83:0,14,155	0/1:23,0:22:19.87:20,0,173	0/0:17,0:17:44.97:0,45,386	1/1:6,12:18:7.05:305,7,0	1/1:3,10:13:21.06:232,21,0	0/0:27,0:27:53.96:0,54,464	1/1:0,7:7:18.05:199,18,0	1/1:2,9:11:27.07:299,27,0	1/1:4,11:15:27.07:297,27,0	0/0:8,0:8:21:0,21,187	0/0:13,0:13:32.99:0,33,285	0/0:12,0:12:35.99:0,36,311	1/1:7,22:29:60.10:647,60,0	0/0:10,0:10:23.99:0,24,208	0/0:25,0:25:65.98:0,66,572	0/0:14,0:14:23.96:0,24,203	1/1:3,18:21:38.40:525,38,0	1/1:4,9:13:3.98:252,4,0	1/1:3,23:26:54.15:597,54,0	0/0:17,0:17:29.98:0,30,260	0/0:10,0:10:17.98:0,18,156	0/0:11,0:11:23.99:0,24,208	0/1:4,8:12:4.98:178,0,5	0/1:3,4:7:10.73:118,0,11	1/1:6,11:17:23.90:253,24,0	1/1:2,19:22:21.91:453,22,0
chr10	55336420	.	TTTA	T	1477.91	PASS	AC=14;AF=0.259;AN=54;BaseQRankSum=5.915;DP=261;FS=7.183;HRun=0;HaplotypeScore=48.0518;InbreedingCoeff=0.8655;MQ=68.02;MQ0=6;MQRankSum=-6.792;QD=26.39;ReadPosRankSum=1.833;VQSLOD=2.8105;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,5:10:17.99:245,18,0	0/0:5,0:5:12.03:0,12,204	0/0:10,0:7:11.99:0,12,117	0/0:9,0:6:11.47:0,11,216	1/1:1,10:11:24.05:377,24,0	0/0:15,0:14:33.71:0,34,751	0/0:6,0:6:12:0,12,212	0/0:31,0:28:81.19:0,81,1511	0/0:4,0:4:12.04:0,12,224	0/0:5,0:5:12.04:0,12,248	0/0:11,0:11:30.10:0,30,642	1/1:2,2:4:12.03:179,12,0	0/0:5,0:5:15.02:0,15,242	0/0:5,0:4:6.01:0,6,101	0/0:9,0:8:24.07:0,24,462	0/0:3,0:3:9.02:0,9,153	1/1:2,12:12:27.09:445,27,0	1/1:1,7:8:14.26:210,14,0	0/0:22,0:21:63.17:0,63,1219	0/0:14,0:14:39.08:0,39,679	0/0:9,0:9:18.03:0,18,294	1/1:0,2:2:3.01:51,3,0	1/1:0,5:5:8.74:152,9,0	./.	0/0:12,0:12:30.09:0,30,602	0/0:8,0:7:21.07:0,21,440	0/0:3,0:3:9.03:0,9,192	0/0:19,0:19:36.05:0,36,646
chr10	55336439	.	AT	A	478.94	PASS	AB=0.905;AC=11;AF=0.229;AN=48;BaseQRankSum=6.783;DP=213;FS=8.639;HRun=4;HaplotypeScore=28.7262;InbreedingCoeff=0.6275;MQ=46.16;MQ0=32;MQRankSum=-5.986;QD=8.71;ReadPosRankSum=-0.089;VQSLOD=-0.4321;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,3:4:3.01:36,3,0	0/0:2,0:2:6.02:0,6,84	0/0:4,0:1:2.92:0,3,17	./.	1/1:1,6:7:15.04:177,15,0	0/1:17,2:18:21.19:21,0,522	0/0:4,0:4:12.04:0,12,168	0/0:44,0:28:78.19:0,78,1022	0/0:3,0:3:9.03:0,9,126	0/0:8,0:7:21.07:0,21,293	0/0:10,0:10:30.08:0,30,394	1/1:0,2:2:6.02:72,6,0	0/0:3,0:3:6.02:0,6,83	0/0:1,1:1:3.01:0,3,42	0/0:4,1:4:12.04:0,12,168	0/0:2,0:2:6.02:0,6,84	1/1:5,6:7:15.05:180,15,0	1/1:2,4:4:12.04:144,12,0	0/0:18,0:14:39.13:0,39,544	0/0:9,0:9:27.09:0,27,368	0/0:4,0:4:12.04:0,12,168	./.	./.	./.	0/0:7,0:6:15.05:0,15,203	0/0:9,0:8:18.06:0,18,252	0/0:4,0:3:9.03:0,9,126	0/0:15,0:15:27.09:0,27,376
chr10	55336449	.	TTA	T	161.39	PASS	AC=6;AF=0.150;AN=40;BaseQRankSum=4.630;DP=209;FS=5.513;HRun=0;HaplotypeScore=30.8523;InbreedingCoeff=0.6782;MQ=42.18;MQ0=47;MQRankSum=-3.816;QD=7.69;ReadPosRankSum=-0.551;VQSLOD=2.1302;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	0/0:1,0:1:3.01:0,3,51	./.	./.	1/1:2,4:6:8.94:79,9,0	0/0:17,0:16:45.15:0,45,771	0/0:4,0:4:9.03:0,9,153	0/0:44,0:21:57.19:0,57,968	0/0:7,0:6:18.06:0,18,308	0/0:9,0:6:18.06:0,18,309	0/0:11,0:11:33.10:0,33,536	./.	0/0:1,0:1:3.01:0,3,51	0/0:2,0:2:6.02:0,6,101	0/0:3,1:3:6.02:0,6,103	./.	1/1:5,4:4:6.02:79,6,0	1/1:3,3:4:9.03:118,9,0	0/0:23,0:15:33.11:0,33,566	0/0:8,0:8:18.06:0,18,308	0/0:4,0:4:12.04:0,12,205	./.	./.	./.	0/0:7,0:6:15.05:0,15,255	0/0:9,0:8:21.07:0,21,344	0/0:4,0:3:9.03:0,9,154	0/0:13,0:13:24.08:0,24,400
chr10	55336618	.	T	TA	219.40	PASS	AB=0.904;AC=11;AF=0.306;AN=36;BaseQRankSum=4.613;DP=147;FS=4.613;HRun=0;HaplotypeScore=19.2511;InbreedingCoeff=0.0890;MQ=34.38;MQ0=37;MQRankSum=-0.607;QD=3.43;ReadPosRankSum=1.737;VQSLOD=1.7794;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:10,1:5:26.32:26,0,65	0/0:4,0:3:5.98:0,6,62	0/0:4,0:2:6.02:0,6,83	0/1:11,0:4:0.07:0,0,97	1/1:8,2:7:6.02:83,6,0	0/0:4,0:3:6.02:0,6,76	1/1:4,2:2:6.02:82,6,0	0/0:33,0:22:66.22:0,66,921	0/1:3,1:3:32.30:32,0,67	./.	./.	0/0:3,0:1:2.97:0,3,20	0/0:5,0:4:12.04:0,12,167	0/0:7,0:4:12.04:0,12,167	./.	0/0:2,0:2:6.02:0,6,83	0/1:12,1:5:35.93:36,0,45	0/1:6,1:3:15.92:35,0,16	0/0:4,0:1:3:0,3,26	1/1:0,1:1:3.01:42,3,0	./.	./.	./.	0/0:5,0:2:0.69:0,1,16	./.	./.	./.	./.
chr10	55337803	.	TCTCTCACA	T	724.86	PASS	AB=0.943;AC=12;AF=0.222;AN=54;BaseQRankSum=-1.176;DP=481;FS=12.391;HRun=0;HaplotypeScore=130.5354;InbreedingCoeff=0.2507;MQ=47.68;MQ0=24;MQRankSum=0.668;QD=3.98;ReadPosRankSum=-1.306;VQSLOD=1.8554;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:21,0:20:99:121,0,136	0/0:9,0:9:15.92:0,16,218	./.	0/0:4,0:1:3.01:0,3,58	1/1:20,0:18:14:272,14,0	0/0:19,0:16:26.70:0,27,435	0/0:22,0:19:27.88:0,28,460	0/1:14,0:12:0:0,0,0	0/0:22,0:22:9.83:0,10,130	0/0:26,0:25:69.53:0,70,1325	0/0:15,0:14:15.05:0,15,260	1/1:17,0:17:6.48:61,6,0	0/1:22,0:22:41.85:42,0,520	0/0:12,0:11:21.30:0,21,444	0/0:23,0:22:40.02:0,40,642	0/0:20,0:19:32.61:0,33,862	0/1:27,0:25:99:126,0,782	0/1:14,0:13:99:140,0,182	0/0:7,0:6:18.06:0,18,421	0/0:8,0:8:9.92:0,10,152	0/0:19,0:17:5.49:0,5,58	0/0:11,14:24:6.61:0,7,33	1/1:6,8:14:0.34:1,0,0	0/1:16,17:30:56.34:103,0,56	0/0:24,0:21:14.01:0,14,204	0/0:22,0:22:60.11:0,60,944	0/0:13,0:12:33.48:0,33,597	0/0:8,0:7:18.06:0,18,359
chr10	55337805	.	TCTCACA	T	1223.47	PASS	AB=0.995;AC=17;AF=0.304;AN=56;BaseQRankSum=-4.170;DP=481;FS=0.000;HRun=0;HaplotypeScore=115.4063;InbreedingCoeff=0.2622;MQ=47.91;MQ0=23;MQRankSum=3.934;QD=5.03;ReadPosRankSum=-0.942;VQSLOD=1.3964;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:20,0:20:29.44:194,0,29	0/0:9,0:9:15.01:0,15,200	0/0:3,0:1:3.01:0,3,53	0/0:4,0:1:3.01:0,3,58	1/1:20,0:18:32.58:374,33,0	0/0:19,0:16:23.70:0,24,382	0/0:22,0:19:27.23:0,27,304	0/0:14,0:12:3.01:0,3,37	0/1:21,0:21:11.52:12,0,72	0/0:26,0:25:66.51:0,67,1093	0/0:16,0:15:18.04:0,18,278	1/1:0,16:16:2.75:56,3,0	0/1:22,0:22:37.35:37,0,388	0/1:12,0:11:29.46:29,0,313	0/0:23,0:22:39.56:0,40,564	0/0:20,0:19:17.98:0,18,635	0/1:24,1:23:99:192,0,372	0/1:15,0:14:85.37:181,0,85	0/0:7,0:6:18.02:0,18,301	0/0:8,0:8:12.51:0,13,201	0/1:22,0:20:3.25:3,0,130	1/1:25,0:24:5.64:33,6,0	1/1:12,0:12:2.92:24,3,0	1/1:32,1:30:21.76:254,22,0	0/0:24,0:21:14.48:0,14,137	0/0:21,0:21:59.83:0,60,785	0/0:14,0:13:33.49:0,33,531	0/0:8,0:7:18.06:0,18,345
chr10	55337807	.	T	TCACACA	4054.87	PASS	AB=0.883;AC=27;AF=0.500;AN=54;BaseQRankSum=-5.461;DP=494;FS=0.869;HRun=0;HaplotypeScore=116.3874;InbreedingCoeff=0.6723;MQ=47.53;MQ0=25;MQRankSum=0.607;QD=15.24;ReadPosRankSum=-2.377;VQSLOD=2.5637;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:19:24.04:0,24,325	1/1:10,0:10:12.04:259,12,0	0/0:5,0:1:2.98:0,3,21	0/0:6,0:1:3.01:0,3,41	0/0:18,0:18:32.90:0,33,444	1/1:19,0:16:20.78:426,21,0	1/1:22,0:19:9.01:199,9,0	1/1:16,0:14:9.02:139,9,0	0/0:11,0:23:2.67:0,3,16	1/1:28,0:27:52.42:832,52,0	1/1:16,0:15:15.03:267,15,0	0/0:16,0:16:3.48:0,3,50	0/0:21,0:21:26.51:0,27,480	0/0:11,0:10:14.84:0,15,303	1/1:23,0:22:30.57:672,31,0	0/0:20,0:20:24.54:0,25,194	0/0:22,0:23:39.13:0,39,609	0/0:15,0:14:17.06:0,17,260	1/1:7,0:6:3:28,3,0	0/1:8,0:8:7.74:176,0,8	1/1:24,0:22:8.78:90,9,0	0/1:24,0:23:0:0,0,0	./.	0/0:34,0:31:5.83:0,6,64	0/1:11,9:21:0.13:0,0,0	1/1:22,0:22:28.45:411,28,0	1/1:14,0:13:0.14:260,0,0	1/1:9,0:7:15.04:295,15,0
chr10	55339180	.	CCTG	C	555.72	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.883;DP=609;FS=5.824;HRun=0;HaplotypeScore=86.9962;InbreedingCoeff=0.9874;MQ=92.68;MQ0=0;MQRankSum=-3.404;QD=42.75;ReadPosRankSum=-2.953;VQSLOD=4.0922;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,141,3420	0/0:7,0:7:21.05:0,21,460	0/0:21,0:21:60.18:0,60,1355	0/0:31,0:31:56.90:0,57,1806	0/0:23,0:23:66.09:0,66,1573	0/0:17,0:17:51.18:0,51,1257	0/0:27,0:27:81.27:0,81,1923	1/1:1,12:13:36.12:650,36,0	0/0:20,0:20:60.19:0,60,1393	0/0:17,0:17:48.16:0,48,1103	0/0:10,0:10:30.10:0,30,737	0/0:18,0:18:54.16:0,54,1235	0/0:15,0:15:45.15:0,45,1109	0/0:25,0:25:75.26:0,75,1797	0/0:15,0:15:45.15:0,45,1109	0/0:20,0:19:60.21:0,60,1443	0/0:42,0:42:99:0,126,3054	0/0:26,0:26:78.27:0,78,1830	0/0:23,0:23:66.11:0,66,1527	0/0:17,0:17:48.16:0,48,1182	0/0:35,0:35:99:0,99,2325	0/0:23,0:23:66.23:0,66,1625	0/0:23,0:23:69.24:0,69,1646	0/0:23,0:23:69.24:0,69,1701	0/0:22,0:22:66.23:0,66,1626	0/0:23,0:23:69.24:0,69,1634	0/0:20,0:20:60.21:0,60,1478	0/0:6,0:6:18.06:0,18,329
chr10	55339860	.	GAGCTCTAGCTAGTGGTTCT	G	18749.54	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=15.705;DP=502;FS=12.926;HRun=0;HaplotypeScore=271.3149;InbreedingCoeff=0.9616;MQ=69.49;MQ0=0;MQRankSum=-12.926;QD=90.58;ReadPosRankSum=1.777;VQSLOD=3.1089;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:84.29:0,84,7271	0/0:7,0:7:21.07:0,21,1894	0/0:9,0:9:9.03:0,9,509	0/0:12,0:12:27.09:0,27,1014	0/0:3,0:3:9.03:0,9,599	1/1:5,11:16:21.07:1131,21,0	1/1:5,13:18:30.10:1617,30,0	0/0:28,0:28:75.25:0,75,5719	1/1:6,13:19:33.11:1779,33,0	1/1:1,9:10:27.09:1214,27,0	1/1:0,10:10:18.06:874,18,0	0/0:23,0:23:69.24:0,69,5975	0/0:30,0:30:81.28:0,81,6463	0/0:31,0:31:90.31:0,90,7526	1/1:4,19:23:48.04:2587,48,0	0/0:26,0:26:75.24:0,75,5829	0/0:30,0:30:84.18:0,84,6956	0/0:22,0:22:63.22:0,63,5239	1/1:9,10:19:30.04:1086,30,0	1/1:4,10:14:21.03:867,21,0	1/1:6,16:22:20.86:1102,21,0	0/0:12,0:12:33.11:0,33,2627	0/0:4,0:4:12.04:0,12,871	0/0:29,0:29:84.29:0,84,6981	1/1:1,16:17:39.13:2103,39,0	1/1:1,11:12:33.11:1316,33,0	1/1:2,20:22:51.18:2748,51,0	1/1:2,3:5:6.02:324,6,0
chr10	55341369	.	T	TAC	324.45	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=-0.257;DP=705;FS=0.000;HRun=0;HaplotypeScore=86.1279;InbreedingCoeff=0.6350;MQ=63.35;MQ0=1;MQRankSum=-1.154;QD=6.90;ReadPosRankSum=-0.889;VQSLOD=2.8100;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,114,1407	1/1:3,9:12:24.08:402,24,0	0/0:31,0:21:17.69:0,18,318	0/1:35,0:24:28.17:28,0,228	0/0:35,0:35:93.28:0,93,1169	0/0:19,0:19:48.15:0,48,610	0/0:24,0:24:54.17:0,54,686	0/0:22,0:22:45.13:0,45,561	0/0:18,0:18:42.12:0,42,523	0/0:23,0:23:60.15:0,60,735	0/0:26,0:26:66.18:0,66,802	0/0:22,0:22:57.17:0,57,713	0/0:22,0:22:51.14:0,51,625	0/0:20,0:20:57.15:0,57,695	0/0:18,0:18:51.15:0,51,635	0/0:16,0:16:33.09:0,33,406	0/0:36,0:36:87.28:0,87,1104	0/0:33,0:33:81.19:0,81,992	0/0:23,0:22:38.93:0,39,514	0/0:30,0:30:81.25:0,81,1019	0/0:25,0:25:48.15:0,48,611	0/0:36,0:36:99:0,99,1233	0/0:35,0:35:87.27:0,87,1094	0/0:23,0:23:60.19:0,60,759	0/0:23,0:23:59.91:0,60,749	0/0:20,0:20:57.18:0,57,725	0/0:31,0:31:84.20:0,84,1009	0/0:5,0:5:15.05:0,15,191
chr10	55343770	.	T	TCC	4075.79	PASS	AB=1.000;AC=43;AF=0.768;AN=56;BaseQRankSum=0.715;DP=451;FS=5.327;HRun=8;HaplotypeScore=71.7497;InbreedingCoeff=0.7259;MQ=82.25;MQ0=4;MQRankSum=-1.067;QD=13.77;ReadPosRankSum=0.884;VQSLOD=0.7030;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,4:21:20.70:276,21,0	0/1:1,0:1:0:0,0,0	0/0:27,0:16:4.88:0,5,172	0/0:45,0:34:13.86:0,14,269	1/1:4,0:12:2.26:36,2,0	1/1:4,8:13:20.56:293,21,0	1/1:3,22:25:27.69:472,28,0	0/0:17,0:17:29.99:0,30,328	1/1:3,11:15:17.65:248,18,0	1/1:9,0:10:14.97:169,15,0	1/1:2,9:11:12.04:191,12,0	1/1:2,0:9:3:29,3,0	0/0:23,0:23:42.05:0,42,467	0/0:17,0:17:36.02:0,36,388	1/1:4,14:18:23.57:342,24,0	0/0:22,0:22:60.15:0,60,668	1/1:8,1:24:12.50:134,12,0	1/1:2,2:16:1.98:95,2,0	1/1:2,3:7:14.02:160,14,0	1/1:8,1:10:14.52:174,15,0	1/1:2,9:14:15.01:210,15,0	1/1:6,0:10:3:29,3,0	1/1:0,1:7:2.75:28,3,0	1/1:6,0:17:9.01:86,9,0	1/1:7,12:20:26.58:375,27,0	1/1:6,5:12:15.02:207,15,0	1/1:2,13:16:27.09:428,27,0	1/1:2,6:8:6.02:95,6,0
chr10	55344672	.	CTG	C	1558.96	PASS	AB=0.961;AC=25;AF=0.446;AN=56;BaseQRankSum=2.527;DP=557;FS=33.316;HRun=0;HaplotypeScore=141.3714;InbreedingCoeff=0.6839;MQ=50.43;MQ0=16;MQRankSum=1.435;QD=6.50;ReadPosRankSum=-3.596;VQSLOD=0.7958;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:31:22.12:0,22,729	0/0:12,0:12:3.42:0,3,92	0/0:12,0:5:7.27:0,7,94	0/0:27,0:15:18.03:0,18,191	0/0:33,0:33:40.06:0,40,873	1/1:18,1:17:2.16:107,2,0	1/1:22,1:21:26:218,26,0	0/0:27,0:26:74.07:0,74,1082	0/1:16,0:16:5.73:150,0,6	1/1:18,3:19:27.34:194,27,0	1/1:17,0:14:16.79:128,17,0	0/1:12,1:13:9.40:9,0,510	0/0:17,0:17:45.58:0,46,757	0/0:15,0:14:38.43:0,38,614	1/1:15,2:14:20.95:176,21,0	0/0:21,0:21:57.18:0,57,1063	0/0:22,0:20:26.18:0,26,718	0/0:15,0:14:36.54:0,37,489	0/1:20,1:16:99:144,0,101	1/1:22,0:20:11.38:91,11,0	1/1:9,0:9:5.99:50,6,0	0/0:31,1:30:15.02:0,15,208	0/0:23,1:21:26.58:0,27,452	0/0:26,1:27:29.49:0,29,420	1/1:19,0:17:12.40:101,12,0	1/1:18,2:19:34.52:299,35,0	1/1:19,0:17:9.74:76,10,0	1/1:4,0:3:3.44:21,3,0
chr10	55344674	.	GTCTCTCTCTGTCTC	G	167.15	PASS	AB=1.000;AC=8;AF=0.143;AN=56;BaseQRankSum=0.901;DP=557;FS=8.754;HRun=0;HaplotypeScore=233.8174;InbreedingCoeff=0.2541;MQ=48.86;MQ0=18;MQRankSum=-1.066;QD=1.62;ReadPosRankSum=-2.249;VQSLOD=1.1704;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:31:51.58:0,52,1759	1/1:5,7:12:6.02:241,6,0	1/1:11,0:5:2.60:10,3,0	0/0:23,0:13:2.90:0,3,16	0/0:31,0:31:52.95:0,53,2069	0/1:21,0:18:1.22:1,0,426	0/0:23,0:21:24.74:0,25,588	0/0:29,0:28:4.58:0,5,660	0/0:16,0:16:19.85:0,20,694	0/0:22,0:20:44.71:0,45,1241	0/0:18,0:15:3.86:0,4,307	0/0:14,0:14:34.91:0,35,1221	0/0:17,0:17:39.13:0,39,1775	0/0:14,0:13:33.10:0,33,1441	0/1:16,0:13:5.39:5,0,431	0/0:21,0:21:54.19:0,54,2516	0/0:22,0:20:43.06:0,43,1914	0/0:16,0:14:27.92:0,28,1011	0/0:20,0:15:35.82:0,36,465	0/1:23,0:21:3.78:4,0,510	0/0:10,0:10:6.02:0,6,340	0/0:32,0:30:7.27:0,7,218	0/0:25,0:22:23.38:0,23,1213	0/0:24,0:24:14.29:0,14,456	0/1:20,0:17:12.94:13,0,336	0/0:21,0:20:36.99:0,37,873	0/0:19,0:17:32.15:0,32,1135	0/0:4,0:3:5.05:0,5,154
chr10	55344684	.	GTCTC	G	845.84	PASS	AB=1.000;AC=5;AF=0.096;AN=52;BaseQRankSum=-2.295;DP=517;FS=0.000;HRun=0;HaplotypeScore=162.5623;InbreedingCoeff=0.4920;MQ=45.82;MQ0=16;MQRankSum=-5.581;QD=13.43;ReadPosRankSum=-2.341;VQSLOD=2.5373;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:32:42.86:0,43,505	1/1:8,0:8:6.01:57,6,0	./.	./.	0/0:33,0:33:41.49:0,41,452	0/0:23,0:20:11.20:0,11,147	0/0:19,0:17:11.94:0,12,153	1/1:5,24:29:71.75:846,72,0	0/0:16,0:16:15.96:0,16,199	0/0:19,0:17:20.68:0,21,360	0/0:14,0:11:8.57:0,9,113	0/0:13,0:13:25.20:0,25,288	0/0:17,0:17:42.14:0,42,824	0/0:13,0:12:24.08:0,24,574	0/0:14,0:11:6.02:0,6,100	0/0:22,0:22:42.12:0,42,760	0/0:23,0:21:31.33:0,31,439	0/0:16,0:14:24.41:0,24,286	0/0:19,0:14:32.34:0,32,401	0/0:22,0:20:13.15:0,13,171	0/0:9,0:9:7.58:0,8,104	0/0:9,0:27:1.25:0,1,3	0/0:27,0:24:29.43:0,29,357	0/0:24,0:24:2.46:0,2,22	0/0:18,0:15:6.02:0,6,98	0/1:25,0:24:59.90:60,0,270	0/0:18,0:16:28.42:0,28,376	0/0:4,0:3:3.01:0,3,48
chr10	55344696	.	C	CTCTCTC	5267.83	PASS	AB=1.000;AC=38;AF=0.731;AN=52;BaseQRankSum=1.310;DP=499;FS=1.310;HRun=0;HaplotypeScore=173.1396;InbreedingCoeff=0.4862;MQ=43.22;MQ0=18;MQRankSum=-0.473;QD=12.72;ReadPosRankSum=-2.716;VQSLOD=3.7470;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:34,0:32:47.35:633,47,0	0/0:9,0:9:6.02:0,6,84	./.	./.	1/1:28,0:28:35.01:501,35,0	1/1:19,0:16:11.92:143,12,0	1/1:16,0:14:3.42:26,3,0	0/1:33,0:31:70.26:70,0,203	1/1:14,0:14:13.25:200,13,0	1/1:17,0:15:36.67:445,37,0	1/1:14,0:11:6.47:150,6,0	1/1:14,0:14:18.67:293,19,0	0/0:18,0:17:41.83:0,42,710	0/0:13,0:11:23.87:0,24,493	0/1:15,0:12:31.53:71,0,32	0/0:20,0:20:10.44:0,10,331	1/1:25,0:24:30.51:521,31,0	1/1:17,0:15:25.27:466,25,0	0/1:19,0:15:24.32:150,0,24	1/1:20,0:18:14.92:181,15,0	1/1:13,0:13:8.99:113,9,0	0/1:28,0:26:0:0,0,0	1/1:27,0:24:20.28:417,20,0	0/0:9,9:24:2.11:0,2,8	1/1:15,0:12:3:25,3,0	1/1:11,0:23:34.11:382,34,0	1/1:17,0:15:32.68:432,33,0	1/1:4,0:3:3.01:47,3,0
chr10	55344698	.	C	CTGTGTGTGTG	4222.14	PASS	AB=1.000;AC=40;AF=0.800;AN=50;BaseQRankSum=0.839;DP=527;FS=1.707;HRun=0;HaplotypeScore=212.3114;InbreedingCoeff=0.2213;MQ=42.77;MQ0=17;MQRankSum=-2.903;QD=9.36;ReadPosRankSum=-3.708;VQSLOD=3.2714;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:35,0:33:86.13:168,0,86	1/1:9,0:9:2.99:24,3,0	./.	./.	0/1:27,0:27:56.42:56,0,82	1/1:19,0:16:12.04:330,12,0	1/1:20,0:17:3.31:24,3,0	1/1:40,0:38:42.25:464,42,0	1/1:10,6:18:2.59:90,3,0	1/1:18,0:16:14.41:350,14,0	1/1:14,0:11:2.67:47,3,0	1/1:13,0:14:15.05:312,15,0	0/0:22,0:21:6.73:0,7,612	0/0:14,0:12:23.60:0,24,425	1/1:19,0:16:3.01:72,3,0	0/0:17,0:19:23.94:0,24,606	0/1:27,0:25:38.11:127,0,38	0/1:16,0:14:35.67:84,0,36	1/1:15,0:12:3.01:79,3,0	1/1:22,0:20:12.04:325,12,0	1/1:15,0:15:14.96:174,15,0	1/1:26,0:24:3.01:69,3,0	1/1:28,0:25:11.72:315,12,0	1/1:22,0:23:3.47:26,3,0	./.	1/1:23,0:22:36.51:847,37,0	1/1:19,0:17:8.99:195,9,0	1/1:4,0:3:3.01:44,3,0
chr10	55345034	.	G	GC	2912.56	PASS	AB=0.936;AC=38;AF=0.679;AN=56;BaseQRankSum=-1.053;DP=425;FS=3.877;HRun=12;HaplotypeScore=63.0940;InbreedingCoeff=0.5030;MQ=78.19;MQ0=0;MQRankSum=-0.468;QD=8.64;ReadPosRankSum=-0.060;VQSLOD=2.5226;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,0:12:2.96:20,3,0	0/0:6,0:6:2.01:0,2,6	0/0:22,0:17:19.36:0,19,115	0/1:12,0:12:9:37,0,9	1/1:10,2:12:2.96:20,3,0	1/1:11,0:11:26.53:166,27,0	1/1:25,0:25:27.56:235,28,0	0/1:11,0:11:0:0,0,0	1/1:16,0:16:35.20:221,35,0	1/1:23,0:23:40.61:237,41,0	1/1:10,0:10:17.82:124,18,0	0/0:10,5:15:0.38:0,0,1	0/0:6,0:8:7.03:0,7,34	0/0:14,0:15:13.88:0,14,93	1/1:16,0:16:35.03:205,35,0	0/0:13,0:13:8.80:0,9,66	0/1:16,9:26:51.52:68,0,52	1/1:8,6:14:6.01:58,6,0	1/1:20,0:20:32.45:215,32,0	1/1:15,0:15:32.59:223,33,0	1/1:31,0:31:64.41:402,64,0	0/0:9,0:9:2.94:0,3,22	0/1:9,0:9:14.12:19,0,14	1/1:22,3:25:2.10:157,2,0	1/1:16,0:16:26.54:170,27,0	1/1:13,0:13:32.73:234,33,0	1/1:14,0:14:32.35:211,32,0	1/1:6,0:6:8.89:58,9,0
chr10	55345042	.	C	CG	5898.98	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-9.078;DP=395;FS=10.070;HRun=0;HaplotypeScore=46.9445;InbreedingCoeff=0.9594;MQ=76.20;MQ0=0;MQRankSum=-0.752;QD=28.78;ReadPosRankSum=10.797;VQSLOD=3.1549;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:20.37:0,20,163	0/0:7,0:7:14.94:0,15,118	0/0:21,0:16:38.12:0,38,437	0/0:11,0:11:9.25:0,9,87	0/0:8,0:8:11.47:0,11,96	1/1:1,9:10:30.06:376,30,0	1/1:2,25:27:29.40:613,29,0	0/0:7,0:7:20.98:0,21,178	1/1:1,16:17:36.11:473,36,0	1/1:2,19:21:45.05:572,45,0	1/1:0,8:8:18.06:235,18,0	0/0:10,0:10:15.15:0,15,106	0/0:6,0:6:14.94:0,15,132	0/0:14,0:14:34.25:0,34,347	1/1:0,14:14:36.12:476,36,0	0/0:15,0:15:35.84:0,36,364	0/0:29,0:29:42.71:0,43,444	0/0:14,0:14:14.64:0,15,129	1/1:0,16:16:44.69:500,45,0	1/1:1,15:16:41.59:469,42,0	1/1:1,29:30:66.20:861,66,0	0/0:6,0:6:11.76:0,12,107	0/0:9,0:9:17.95:0,18,159	0/0:23,0:23:34.38:0,34,313	1/1:0,13:13:27.09:355,27,0	1/1:1,14:15:13.74:421,14,0	1/1:1,12:13:33.10:430,33,0	1/1:0,5:5:9.03:118,9,0
chr10	55345241	.	T	TG	8878.75	PASS	AB=1.000;AC=54;AF=0.964;AN=56;BaseQRankSum=2.444;DP=637;FS=0.931;HRun=3;HaplotypeScore=108.3401;InbreedingCoeff=0.1742;MQ=84.57;MQ0=1;MQRankSum=1.094;QD=13.94;ReadPosRankSum=5.306;VQSLOD=4.0913;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:42,1:43:99:724,112,0	0/1:8,0:8:2.31:4,0,2	1/1:27,0:27:13.96:244,14,0	0/1:18,0:18:14.39:148,0,14	1/1:11,0:11:26.27:154,26,0	1/1:15,0:15:35.09:214,35,0	1/1:31,0:31:81.49:468,81,0	1/1:32,0:32:34.34:371,34,0	1/1:24,0:24:15.14:298,15,0	1/1:18,0:18:43.23:240,43,0	1/1:9,0:9:20.63:117,21,0	1/1:38,0:38:80.23:576,80,0	1/1:35,0:35:36.46:408,36,0	1/1:36,1:37:84.36:595,84,0	1/1:32,0:32:87.19:500,87,0	1/1:25,0:25:63.80:359,64,0	1/1:27,0:27:70.18:415,70,0	1/1:17,0:17:37.95:222,38,0	1/1:25,0:25:70.03:400,70,0	1/1:13,1:14:15.57:208,16,0	1/1:31,0:30:69.30:406,69,0	1/1:10,0:10:26.27:155,26,0	1/1:14,0:14:29.45:193,29,0	1/1:31,0:31:76.13:456,76,0	1/1:12,1:13:26.51:194,27,0	1/1:22,0:22:39.06:308,39,0	1/1:23,0:23:40.86:370,41,0	1/1:7,0:7:20.63:131,21,0
chr10	55345440	.	C	CT	5481.56	PASS	AB=0.679;AC=36;AF=0.643;AN=56;BaseQRankSum=-6.654;DP=582;FS=0.430;HRun=12;HaplotypeScore=76.8577;InbreedingCoeff=0.5254;MQ=67.82;MQ0=2;MQRankSum=-1.343;QD=12.07;ReadPosRankSum=2.370;VQSLOD=4.8794;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:12,26:38:20.28:608,20,0	0/0:1,0:8:10.18:0,10,30	0/0:12,0:12:15.94:0,16,96	0/0:17,0:14:9.67:0,10,49	1/1:7,6:13:20.94:185,21,0	1/1:5,9:15:22.12:192,22,0	0/1:16,11:28:25.75:267,0,26	0/0:20,1:21:41.42:0,41,295	0/1:11,6:18:48.59:84,0,49	1/1:11,12:23:32.75:278,33,0	1/1:2,8:12:23.70:199,24,0	1/1:10,15:24:26.20:286,26,0	0/0:21,0:21:41.68:0,42,306	0/0:22,2:25:21.80:0,22,322	1/1:5,16:21:38.98:360,39,0	0/0:21,0:21:50.64:0,51,366	1/1:9,12:22:9.44:301,9,0	1/1:3,14:19:19.36:251,19,0	0/1:10,10:20:7.93:241,0,8	0/1:6,5:13:1.37:94,0,1	1/1:8,10:18:5.60:212,6,0	1/1:6,14:19:33.80:294,34,0	1/1:6,10:17:14.49:155,14,0	1/1:13,21:36:60.19:544,60,0	1/1:9,14:24:21.19:330,21,0	0/1:10,9:19:29.53:197,0,30	0/1:11,12:23:20.19:167,0,20	1/1:6,10:15:24.04:234,24,0
chr10	55345804	.	T	TA	20714.86	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=-14.666;DP=627;FS=1.116;HRun=0;HaplotypeScore=54.3174;InbreedingCoeff=0.9990;MQ=89.83;MQ0=0;MQRankSum=-6.798;QD=43.34;ReadPosRankSum=5.025;VQSLOD=5.0305;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,49:50:99:2253,141,0	0/0:9,0:9:27.09:0,27,377	0/0:22,0:22:64.37:0,64,793	0/0:25,0:25:71.65:0,72,890	1/1:0,14:14:39.13:623,39,0	1/1:0,25:24:66.23:1055,66,0	1/1:0,23:23:66.23:1055,66,0	0/0:28,0:28:78.25:0,78,1077	1/1:0,17:17:51.17:815,51,0	1/1:1,37:37:99:1620,102,0	1/1:1,17:18:51.17:815,51,0	1/1:0,24:24:60.20:956,60,0	0/0:22,0:22:63.20:0,63,864	0/0:26,0:26:78.23:0,78,1055	1/1:0,19:19:51.17:815,51,0	0/0:17,0:17:51.16:0,51,696	1/1:0,20:20:57.19:910,57,0	1/1:0,19:19:45.15:719,45,0	1/1:3,18:21:57.12:837,57,0	1/1:2,21:21:54.18:863,54,0	1/1:0,39:39:99:1726,108,0	1/1:0,16:16:45.15:719,45,0	1/1:1,13:14:36.12:574,36,0	1/1:1,30:31:81.28:1295,81,0	1/1:0,14:14:39.13:623,39,0	1/1:0,28:27:84.23:1289,84,0	1/1:1,17:18:51.17:815,51,0	1/1:0,7:7:21.07:336,21,0
chr10	55346538	.	TACACACAC	T	3742.91	PASS	AB=0.773;AC=28;AF=0.500;AN=56;BaseQRankSum=4.631;DP=464;FS=1.243;HRun=0;HaplotypeScore=128.4238;InbreedingCoeff=0.1436;MQ=54.50;MQ0=14;MQRankSum=-6.167;QD=13.23;ReadPosRankSum=-2.877;VQSLOD=1.9450;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:35:50.90:0,51,625	0/0:5,0:7:9:0,9,85	0/0:23,0:5:0.47:0,0,1	0/0:25,0:8:2.90:0,3,16	0/0:8,0:10:15.04:0,15,285	1/1:6,10:17:14.12:478,14,0	0/1:22,10:31:18.12:90,0,18	0/1:19,0:19:23.78:36,0,24	1/1:7,7:15:21.54:484,22,0	0/1:11,5:17:38.32:244,0,38	0/1:7,7:14:12.51:92,0,13	1/1:10,1:11:12.71:168,13,0	0/0:19,0:17:30.06:0,30,751	0/0:17,0:18:32.64:0,33,1067	1/1:7,9:17:24.08:573,24,0	0/1:9,0:13:49.75:50,0,60	0/0:18,0:24:32.18:0,32,696	0/0:11,0:17:33.04:0,33,515	1/1:9,0:8:3.01:66,3,0	1/1:3,1:4:6.01:101,6,0	1/1:17,0:17:8.99:167,9,0	0/1:8,0:13:34.83:132,0,35	0/1:11,0:13:25.66:26,0,121	0/1:28,0:33:50.85:51,0,158	0/1:8,6:14:46.71:279,0,47	0/1:9,7:17:15.98:483,0,16	1/1:1,2:3:3.01:75,3,0	1/1:2,2:3:6.02:151,6,0
chr10	55346590	.	CA	C	202	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.473;DP=548;FS=4.093;HRun=3;HaplotypeScore=145.8505;InbreedingCoeff=0.9807;MQ=59.47;MQ0=9;MQRankSum=-2.596;QD=22.44;ReadPosRankSum=0.253;VQSLOD=2.7913;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:31:83.52:0,84,1101	1/1:1,8:9:24.07:295,24,0	0/0:49,1:30:74.20:0,74,1061	0/0:37,1:22:53.15:0,53,632	0/0:15,0:15:33.09:0,33,456	0/0:16,0:16:29.73:0,30,373	0/0:19,0:19:24.05:0,24,323	0/0:20,0:19:54.18:0,54,778	0/0:15,0:15:43.02:0,43,584	0/0:15,0:14:26.10:0,26,333	0/0:13,0:12:23.10:0,23,307	0/0:21,0:22:62:0,62,797	0/0:13,0:11:33.11:0,33,470	0/0:17,0:17:45.15:0,45,647	0/0:27,0:27:56.45:0,56,714	0/0:14,0:14:36.12:0,36,508	0/0:27,0:26:75.15:0,75,996	0/0:21,0:21:55.43:0,55,780	0/0:16,0:16:45.09:0,45,605	0/0:12,0:12:36.12:0,36,513	0/0:20,0:20:27.09:0,27,389	0/0:21,0:21:60.20:0,60,847	0/0:10,0:9:21:0,21,239	0/0:37,0:37:89.44:0,89,1143	0/0:12,0:12:29.80:0,30,327	0/0:17,0:17:29.45:0,29,517	0/0:9,0:9:24.08:0,24,345	0/0:9,0:8:23.81:0,24,310
chr10	55346607	.	CAG	C	2613.43	PASS	AB=0.896;AC=21;AF=0.375;AN=56;BaseQRankSum=-4.746;DP=623;FS=0.508;HRun=0;HaplotypeScore=157.1174;InbreedingCoeff=0.5959;MQ=59.03;MQ0=12;MQRankSum=5.383;QD=8.43;ReadPosRankSum=4.711;VQSLOD=3.1326;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:23,7:34:44.43:414,44,0	0/0:10,0:12:17.04:0,17,179	0/1:60,0:32:7.31:7,0,78	0/0:61,0:25:4.25:0,4,49	1/1:8,5:13:11.89:121,12,0	0/0:14,0:14:5.98:0,6,61	0/0:9,0:19:17.96:0,18,159	0/1:22,2:24:32.12:32,0,285	0/0:17,0:18:8.20:0,8,54	0/0:8,0:16:22.30:0,22,216	0/0:22,0:22:8.72:0,9,72	1/1:12,9:22:32.90:350,33,0	0/1:15,0:14:10.96:11,0,249	0/1:16,1:17:0.55:1,0,374	0/0:23,0:24:14.23:0,14,155	0/1:4,5:11:21.93:172,0,22	1/1:9,18:27:54.15:606,54,0	1/1:12,10:21:24.07:269,24,0	0/0:17,0:20:14.81:0,15,143	0/0:18,0:18:22.54:0,23,217	0/0:20,0:19:11.96:0,12,108	1/1:12,8:21:23.79:277,24,0	1/1:8,3:11:14.38:132,14,0	1/1:13,17:32:41.54:421,42,0	0/0:12,0:15:19.17:0,19,146	0/0:21,0:21:33.39:0,33,320	0/0:18,0:18:26.51:0,27,252	0/0:13,0:12:23.84:0,24,182
chr10	55347176	.	T	TG	27156.42	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=10.274;DP=777;FS=6.469;HRun=1;HaplotypeScore=122.1646;InbreedingCoeff=0.9995;MQ=82.26;MQ0=0;MQRankSum=-5.964;QD=41.59;ReadPosRankSum=3.558;VQSLOD=4.0012;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,50:50:99:2113,141,0	1/1:0,13:13:39.13:588,39,0	0/0:21,0:21:38.64:0,39,606	0/0:22,0:22:60.08:0,60,725	1/1:0,26:26:69.23:1036,69,0	1/1:2,25:27:72.24:1078,72,0	1/1:0,41:41:99:1797,120,0	1/1:0,31:31:90.29:1327,90,0	1/1:0,26:26:75.25:1123,75,0	1/1:1,25:26:75.22:1086,75,0	1/1:0,16:16:48.16:719,48,0	1/1:0,27:27:66.22:986,66,0	0/0:16,0:16:45.15:0,45,629	0/0:34,0:34:99:0,102,1349	1/1:0,24:24:63.21:946,63,0	0/0:31,0:30:90.30:0,90,1257	1/1:0,33:33:96.33:1442,96,0	1/1:1,30:31:84.28:1259,84,0	1/1:0,28:29:87.23:1232,87,0	1/1:1,14:15:42.14:630,42,0	1/1:2,60:62:99:2609,175,0	1/1:0,22:22:54.18:810,54,0	1/1:0,29:29:81.27:1217,81,0	1/1:1,32:33:81.27:1213,81,0	1/1:0,20:20:54.15:812,54,0	1/1:0,29:29:87.27:1252,87,0	1/1:0,35:35:99:1521,102,0	1/1:0,8:8:24.08:358,24,0
chr10	55351275	.	AT	A	12522.93	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=9.449;DP=675;FS=0.911;HRun=10;HaplotypeScore=65.9838;InbreedingCoeff=0.9937;MQ=68.10;MQ0=0;MQRankSum=-2.135;QD=21.55;ReadPosRankSum=1.461;VQSLOD=5.8254;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,46:50:99:1120,129,0	1/1:1,14:15:41.95:358,42,0	0/0:9,0:9:18.03:0,18,185	0/0:9,0:9:15:0,15,166	1/1:2,20:22:37.41:472,37,0	1/1:0,16:16:44.99:391,45,0	1/1:5,23:28:65.97:573,66,0	1/1:5,29:33:80.90:693,81,0	1/1:0,26:26:68.99:599,69,0	1/1:3,22:25:65.96:567,66,0	1/1:2,13:15:38.98:339,39,0	1/1:0,25:25:71.99:625,72,0	0/0:25,0:25:60.15:0,60,656	0/0:23,0:23:62.82:0,63,659	1/1:3,23:26:30.96:443,31,0	0/0:28,0:28:81.21:0,81,888	1/1:1,27:28:74.98:651,75,0	1/1:3,30:33:86.98:755,87,0	1/1:2,20:22:59.94:512,60,0	1/1:1,12:13:35.98:313,36,0	1/1:5,36:41:92.96:807,93,0	1/1:4,20:24:26.80:462,27,0	1/1:3,18:21:44.88:391,45,0	1/1:2,39:41:99:964,111,0	1/1:3,16:19:47.99:417,48,0	1/1:4,21:25:59.98:521,60,0	1/1:2,14:17:38.03:318,38,0	1/1:5,10:15:26.97:234,27,0
chr10	55351612	.	AATATACACATATACATGTGTGTAT	A	2361.08	PASS	AC=18;AF=0.375;AN=48;BaseQRankSum=3.871;DP=191;FS=15.676;HRun=0;HaplotypeScore=111.7639;InbreedingCoeff=0.6998;MQ=63.60;MQ0=2;MQRankSum=-5.194;QD=48.19;ReadPosRankSum=0.483;VQSLOD=1.8401;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:27.09:0,27,1663	0/0:5,0:5:15.05:0,15,1118	0/0:5,0:4:9.03:0,9,276	0/0:8,0:5:11.84:0,12,330	0/0:12,0:12:27.09:0,27,1901	1/1:7,0:7:12.04:263,12,0	1/1:3,0:3:3.01:48,3,0	0/0:34,0:34:78.26:0,78,4573	./.	./.	1/1:5,3:8:9.03:411,9,0	0/0:5,0:5:9.03:0,9,482	0/0:3,0:3:6.02:0,6,471	0/0:2,0:2:3.01:0,3,193	./.	0/0:1,0:1:3.01:0,3,266	0/0:22,0:22:36.11:0,36,2140	0/0:16,0:16:39.09:0,39,2218	1/1:7,0:7:6.01:81,6,0	./.	1/1:2,0:2:3.01:76,3,0	0/0:2,0:2:6.02:0,6,432	0/0:3,0:3:6.01:0,6,296	0/0:3,0:3:3.01:0,3,71	1/1:9,0:9:9.03:167,9,0	1/1:3,0:3:9.02:331,9,0	1/1:0,4:4:6.02:268,6,0	1/1:3,3:6:15.05:885,15,0
chr10	55351630	.	TGTG	T	222.80	PASS	AB=0.833;AC=13;AF=0.295;AN=44;BaseQRankSum=5.329;DP=162;FS=26.331;HRun=0;HaplotypeScore=55.4654;InbreedingCoeff=0.5393;MQ=68.97;MQ0=3;MQRankSum=-4.806;QD=10.13;ReadPosRankSum=1.712;VQSLOD=1.4931;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:27.06:0,27,597	0/0:5,0:5:15.05:0,15,369	0/0:8,0:5:1.61:0,2,147	0/0:11,0:5:11.73:0,12,167	0/0:12,0:12:27.09:0,27,660	1/1:0,2:3:5.93:40,6,0	./.	0/0:36,0:36:99:0,108,2549	./.	./.	0/1:3,0:3:5.75:15,0,6	0/0:3,0:3:9.02:0,9,144	0/0:2,0:2:6.02:0,6,143	0/0:1,0:1:3.01:0,3,74	./.	0/0:1,0:1:3.01:0,3,74	0/0:21,0:21:27.09:0,27,665	0/0:20,0:20:36.12:0,36,855	./.	./.	1/1:0,1:1:2.97:20,3,0	0/0:3,0:3:6.02:0,6,144	0/0:1,0:1:3.01:0,3,62	0/1:1,0:1:0:0,0,0	0/1:0,3:3:0:0,0,0	1/1:0,2:2:6.02:110,6,0	1/1:4,0:4:5.97:45,6,0	1/1:4,0:5:14.91:127,15,0
chr10	55351654	.	TTATATATA	T	1845.26	PASS	AB=1.000;AC=39;AF=0.813;AN=48;BaseQRankSum=4.431;DP=157;FS=8.573;HRun=0;HaplotypeScore=61.0925;InbreedingCoeff=0.3291;MQ=70.70;MQ0=3;MQRankSum=-5.312;QD=17.41;ReadPosRankSum=0.431;VQSLOD=1.1621;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:13:9.03:167,9,0	1/1:2,2:4:3.01:38,3,0	0/1:6,0:2:0:0,0,0	0/0:22,0:7:6.92:0,7,47	1/1:7,1:8:12.03:210,12,0	1/1:3,1:4:6.01:93,6,0	1/1:2,0:2:6.02:110,6,0	0/0:25,0:25:35.48:0,35,637	1/1:1,0:1:3.01:66,3,0	./.	1/1:3,2:5:6.02:135,6,0	./.	0/0:2,0:2:3.01:0,3,100	./.	1/1:1,0:1:3.01:66,3,0	0/1:2,0:2:0:0,0,0	1/1:20,0:20:3:27,3,0	0/1:16,0:16:15.99:157,0,16	1/1:1,0:1:3:25,3,0	1/1:3,0:3:6.02:132,6,0	./.	1/1:2,0:2:3:26,3,0	1/1:1,0:1:3.01:77,3,0	1/1:1,0:1:0.47:1,0,0	1/1:4,0:4:6.01:92,6,0	1/1:3,0:3:9.03:175,9,0	1/1:3,1:4:3.01:69,3,0	1/1:3,2:5:15.05:302,15,0
chr10	55351671	.	TATATATATAGAGAGAG	T	2858.20	PASS	AB=0.702;AC=35;AF=0.673;AN=52;BaseQRankSum=4.396;DP=186;FS=9.865;HRun=0;HaplotypeScore=70.8100;InbreedingCoeff=0.3890;MQ=68.62;MQ0=4;MQRankSum=-4.230;QD=23.62;ReadPosRankSum=4.949;VQSLOD=0.1862;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:1,10:11:9.03:383,9,0	0/0:2,0:2:0:0,0,0	0/0:5,0:2:4.83:0,5,51	0/0:24,0:8:12.95:0,13,162	1/1:1,9:10:12.04:422,12,0	0/1:2,0:8:0.13:74,0,0	1/1:0,0:5:6.02:142,6,0	0/0:22,0:22:59.56:0,60,1659	1/1:0,0:3:3.01:81,3,0	1/1:3,0:2:5.93:54,6,0	1/1:4,0:6:6.02:130,6,0	./.	0/0:4,0:4:9.03:0,9,347	0/0:3,0:3:6.02:0,6,216	1/1:1,0:4:3.01:81,3,0	0/0:3,0:3:0.21:0,0,0	1/1:1,20:21:3.01:105,3,0	0/1:2,13:15:58.98:374,0,59	1/1:2,0:2:3:25,3,0	1/1:0,0:4:6.02:163,6,0	./.	1/1:0,1:1:3.01:104,3,0	1/1:3,0:3:3.01:68,3,0	1/1:0,2:2:0.47:1,0,0	1/1:1,0:5:9.03:157,9,0	1/1:0,0:5:14.96:232,15,0	0/1:4,0:4:11.52:64,0,12	1/1:2,0:8:15.05:349,15,0
chr10	55351679	.	TAGAGAG	T	1430.75	PASS	AB=1.000;AC=34;AF=0.680;AN=50;BaseQRankSum=3.799;DP=199;FS=3.315;HRun=0;HaplotypeScore=62.1359;InbreedingCoeff=0.4764;MQ=69.53;MQ0=2;MQRankSum=-2.427;QD=12.02;ReadPosRankSum=4.848;VQSLOD=1.6212;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:10,0:10:9.03:135,9,0	0/1:3,0:3:1.06:16,0,1	0/0:9,0:4:11.96:0,12,129	0/0:25,0:9:4.65:0,5,60	1/1:10,0:10:10.28:104,10,0	1/1:8,0:8:6.02:101,6,0	1/1:5,0:5:6.02:104,6,0	0/0:22,0:22:45.15:0,45,1102	1/1:3,0:3:3.01:51,3,0	1/1:1,5:5:9.02:150,9,0	1/1:5,1:6:4.25:50,4,0	./.	0/0:4,0:4:6.02:0,6,148	0/0:5,0:5:9.03:0,9,223	1/1:5,0:4:3.01:51,3,0	0/0:7,0:7:8.77:0,9,225	1/1:20,0:20:3.01:50,3,0	0/1:15,0:15:73.54:114,0,74	./.	1/1:4,0:4:6.02:102,6,0	./.	1/1:1,0:1:3.01:50,3,0	0/0:2,0:4:2.35:0,2,8	1/1:2,0:2:0.47:1,0,0	1/1:5,0:5:9.03:154,9,0	1/1:5,0:5:11.93:177,12,0	1/1:3,0:3:2.98:21,3,0	1/1:8,0:8:9.03:156,9,0
chr10	55352665	.	TAAA	T	1856.77	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=8.548;DP=639;FS=3.863;HRun=3;HaplotypeScore=88.1192;InbreedingCoeff=0.9756;MQ=62.58;MQ0=0;MQRankSum=-4.955;QD=48.86;ReadPosRankSum=-3.576;VQSLOD=2.6186;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,111,2433	0/0:7,0:7:21.07:0,21,518	0/0:9,0:9:16.09:0,16,538	0/0:7,0:6:18.01:0,18,258	0/0:27,0:27:81.28:0,81,1959	0/0:26,0:25:78.27:0,78,1919	0/0:19,0:19:57.19:0,57,1336	1/1:0,38:38:99:1952,114,0	0/0:31,0:31:93.32:0,93,2263	0/0:34,0:34:99:0,102,2218	0/0:27,0:27:78.20:0,78,1755	0/0:24,0:24:72.24:0,72,1692	0/0:23,0:23:69.22:0,69,1650	0/0:23,0:23:69.24:0,69,1650	0/0:23,0:23:69.20:0,69,1557	0/0:19,0:19:57.20:0,57,1403	0/0:15,0:15:45.15:0,45,1109	0/0:12,0:12:36.12:0,36,884	0/0:18,0:18:54.19:0,54,1331	0/0:30,0:30:90.21:0,90,1999	0/0:21,0:21:63.20:0,63,1502	0/0:18,0:18:54.19:0,54,1331	0/0:37,0:37:99:0,111,2520	0/0:17,0:17:51.16:0,51,1151	0/0:20,0:20:60.17:0,60,1401	0/0:32,0:32:96.32:0,96,2275	0/0:34,0:34:99:0,102,2495	0/0:11,0:11:33.10:0,33,765
chr10	55353119	.	C	CCCATGGGAAG	65859.98	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-5.020;DP=760;FS=0.000;HRun=0;HaplotypeScore=206.9669;InbreedingCoeff=0.9996;MQ=77.14;MQ0=0;MQRankSum=-16.455;QD=107.09;ReadPosRankSum=-0.795;VQSLOD=4.7616;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:22,22:52:93.32:4462,93,0	1/1:4,9:13:39.13:1962,39,0	0/0:28,0:28:69.22:0,69,1972	0/0:24,0:24:60.20:0,60,1784	1/1:13,12:31:59.99:2071,60,0	1/1:7,13:20:57.20:2780,57,0	1/1:9,13:24:51.11:2293,51,0	1/1:24,5:32:87.30:4014,87,0	1/1:10,20:32:87.30:4330,87,0	1/1:7,14:25:75.25:3360,75,0	1/1:7,10:17:39.13:1658,39,0	1/1:12,17:31:81.28:3905,81,0	0/0:37,0:37:99:0,108,3319	0/0:27,0:27:75.24:0,75,2354	1/1:17,21:39:99:5101,108,0	0/0:29,0:29:78.26:0,78,2356	1/1:8,14:26:57.13:2631,57,0	1/1:14,6:21:33.05:1580,33,0	1/1:8,4:18:44.17:1710,44,0	1/1:16,27:47:99:5438,123,0	1/1:13,7:20:39:1444,39,0	1/1:8,12:23:51.17:2235,51,0	1/1:9,10:24:50.65:1916,51,0	1/1:8,10:22:45.04:2071,45,0	1/1:11,10:23:51.17:2509,51,0	1/1:15,16:37:99:4114,105,0	1/1:8,14:27:60.21:2989,60,0	1/1:4,7:11:27.09:1290,27,0
chr10	55356400	.	T	TCTC	30921.18	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-10.945;DP=721;FS=12.187;HRun=0;HaplotypeScore=97.0389;InbreedingCoeff=0.9987;MQ=78.73;MQ0=0;MQRankSum=-6.403;QD=50.28;ReadPosRankSum=3.162;VQSLOD=6.6460;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,39:42:82.65:2065,83,0	1/1:0,12:12:27.09:622,27,0	0/0:18,0:18:45.12:0,45,692	0/0:19,0:19:44.27:0,44,702	1/1:4,32:37:81.28:1740,81,0	1/1:0,21:24:39.13:899,39,0	1/1:0,18:19:45.15:1035,45,0	1/1:1,32:38:99:2118,111,0	1/1:2,20:23:45.15:993,45,0	1/1:1,30:31:84.12:1827,84,0	1/1:1,30:31:84.28:1722,84,0	1/1:2,12:14:30.10:692,30,0	0/0:27,0:27:78.25:0,78,1299	0/0:21,0:21:63.19:0,63,1023	1/1:2,26:28:60.21:1348,60,0	0/0:21,0:21:60.19:0,60,998	1/1:2,26:31:57.20:1314,57,0	1/1:2,20:22:52.47:1267,52,0	1/1:4,13:18:42.11:855,42,0	1/1:1,30:32:78.22:1546,78,0	1/1:1,21:22:54.19:1245,54,0	1/1:1,29:32:81.28:1737,81,0	1/1:0,27:28:69.23:1394,69,0	1/1:2,21:23:45.15:1038,45,0	1/1:0,27:27:63.21:1277,63,0	1/1:1,33:35:99:2252,102,0	1/1:4,31:35:63.22:1452,63,0	1/1:0,11:11:21.07:484,21,0
chr10	55358698	.	A	AG	21906.77	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-1.620;DP=614;FS=14.266;HRun=0;HaplotypeScore=80.5282;InbreedingCoeff=0.9957;MQ=85.80;MQ0=0;MQRankSum=-4.324;QD=43.47;ReadPosRankSum=3.933;VQSLOD=3.9619;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,37:37:99:1581,99,0	1/1:0,6:6:15.05:239,15,0	0/0:18,0:18:47.52:0,48,623	0/0:23,0:25:40.15:0,40,656	1/1:0,18:19:48.16:749,48,0	1/1:0,29:29:81.28:1293,81,0	1/1:0,24:24:63.21:1006,63,0	1/1:0,26:26:78.23:1199,78,0	1/1:0,19:19:51.17:815,51,0	1/1:0,9:9:27.09:431,27,0	1/1:1,12:13:27.09:431,27,0	1/1:1,16:17:42.14:671,42,0	0/0:24,0:24:72.21:0,72,969	0/0:21,0:21:63.19:0,63,859	1/1:0,24:24:63.21:1006,63,0	0/0:22,0:22:66.21:0,66,904	1/1:0,27:27:72.25:1150,72,0	1/1:0,15:15:42.14:671,42,0	1/1:0,34:34:99:1521,102,0	1/1:0,25:25:72.25:1150,72,0	1/1:0,23:23:69.24:1102,69,0	1/1:1,19:20:54.18:860,54,0	1/1:0,17:17:48.16:766,48,0	1/1:0,30:30:78.27:1246,78,0	1/1:0,18:18:42.14:670,42,0	1/1:0,33:33:99:1576,99,0	1/1:0,29:29:81.28:1293,81,0	1/1:0,10:10:30.10:479,30,0
chr10	55358874	.	GT	G	5160.39	PASS	AB=0.611;AC=27;AF=0.482;AN=56;BaseQRankSum=6.599;DP=600;FS=5.092;HRun=11;HaplotypeScore=70.4478;InbreedingCoeff=0.9152;MQ=75.04;MQ0=0;MQRankSum=-1.247;QD=17.98;ReadPosRankSum=3.545;VQSLOD=5.9909;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:72.16:0,72,750	1/1:2,5:7:14.97:123,15,0	0/0:31,1:28:23.99:0,24,358	0/0:15,0:12:9.59:0,10,148	0/0:33,0:33:58.78:0,59,799	1/1:1,18:20:52.97:425,53,0	1/1:6,16:22:38.91:320,39,0	0/0:12,0:35:69.79:0,70,379	1/1:2,13:15:22.28:301,22,0	1/1:10,21:32:64.93:523,65,0	1/1:5,18:23:47.89:392,48,0	0/0:9,0:9:27.07:0,27,288	0/0:17,0:17:45.06:0,45,466	0/0:11,0:11:33.08:0,33,352	1/1:3,10:13:23.96:197,24,0	0/0:19,0:19:51.11:0,51,535	0/0:33,2:35:34.91:0,35,774	0/0:20,1:22:23.13:0,23,409	0/1:8,14:22:15.81:297,0,16	1/1:6,27:33:77.85:636,78,0	1/1:1,14:15:44.75:357,45,0	0/0:24,1:25:41.51:0,42,641	0/0:18,0:18:47.90:0,48,486	0/0:15,0:15:39.10:0,39,415	1/1:2,18:20:44.94:369,45,0	1/1:2,23:25:68.89:562,69,0	1/1:4,28:32:42.61:559,43,0	1/1:3,5:8:11.96:99,12,0
chr10	55359798	.	TC	T	5737.21	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=8.487;DP=383;FS=5.834;HRun=2;HaplotypeScore=38.9162;InbreedingCoeff=0.9846;MQ=89.97;MQ0=0;MQRankSum=-2.381;QD=36.08;ReadPosRankSum=2.819;VQSLOD=4.8567;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:96.30:0,96,1393	0/0:4,0:4:12.04:0,12,180	0/0:14,0:14:42.11:0,42,587	0/0:22,0:22:61.23:0,61,717	0/0:6,0:6:18.03:0,18,227	1/1:0,14:14:33.11:428,33,0	1/1:0,12:12:36.12:467,36,0	0/0:11,0:11:33.10:0,33,476	1/1:0,13:13:39.13:506,39,0	1/1:0,20:20:60.13:731,60,0	1/1:0,9:9:27.09:350,27,0	0/0:14,0:14:42.14:0,42,629	0/0:11,0:11:33.07:0,33,469	0/0:10,0:10:27.07:0,27,384	1/1:0,10:10:24.08:312,24,0	0/0:14,0:13:42.13:0,42,609	0/0:31,0:31:93.32:0,93,1392	0/0:12,0:12:36.12:0,36,539	1/1:0,10:10:30.10:389,30,0	1/1:0,13:13:33.11:428,33,0	1/1:0,20:20:54.18:701,54,0	0/0:13,0:13:39.12:0,39,562	0/0:10,0:10:30.03:0,30,400	0/0:20,0:20:60.20:0,60,898	1/1:1,5:6:17.85:207,18,0	1/1:0,12:12:36.09:438,36,0	1/1:0,17:17:51.17:662,51,0	1/1:0,3:3:9.03:117,9,0
chr10	55360415	.	CGGCAG	C	18861.01	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=5.409;DP=495;FS=6.011;HRun=0;HaplotypeScore=106.9236;InbreedingCoeff=0.9499;MQ=65.47;MQ0=0;MQRankSum=-7.129;QD=44.07;ReadPosRankSum=4.990;VQSLOD=4.3508;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,22:24:45.15:931,45,0	1/1:0,3:3:6.02:124,6,0	0/0:17,0:17:20.60:0,21,1088	0/0:18,0:16:40.95:0,41,1082	1/1:2,12:14:18.06:372,18,0	1/1:0,17:17:42.14:868,42,0	1/1:3,25:28:63.22:1292,63,0	1/1:5,18:23:54.12:1072,54,0	1/1:3,20:23:51.18:1041,51,0	1/1:2,16:18:39.13:790,39,0	1/1:1,9:10:18.06:372,18,0	1/1:2,9:11:21.07:435,21,0	0/0:19,0:19:48.16:0,48,1355	0/0:13,0:13:39.10:0,39,1125	1/1:4,15:19:36.12:745,36,0	1/1:0,12:12:30.10:621,30,0	1/1:3,24:27:63.22:1304,63,0	1/1:2,22:24:51.17:1055,51,0	1/1:2,15:17:29.89:495,30,0	1/1:2,10:12:18.06:372,18,0	1/1:5,34:39:84.29:1714,84,0	1/1:2,4:6:12.04:248,12,0	1/1:0,14:14:30.10:621,30,0	1/1:0,23:23:66.23:1366,66,0	1/1:1,13:14:36.12:745,36,0	1/1:2,19:21:48.06:912,48,0	1/1:2,20:22:51.16:1055,51,0	1/1:2,5:7:15.05:311,15,0
chr10	55360813	.	TTG	T	1041.37	PASS	AC=54;AF=0.964;AN=56;BaseQRankSum=-1.817;DP=491;FS=2.602;HRun=0;HaplotypeScore=231.2793;InbreedingCoeff=0.4106;MQ=62.96;MQ0=0;MQRankSum=-1.331;QD=2.17;ReadPosRankSum=-1.447;VQSLOD=2.2107;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:15,1:16:11.91:53,12,0	1/1:8,0:8:3.77:7,4,0	1/1:12,0:12:7.25:37,7,0	0/0:10,0:10:4.01:0,4,47	1/1:26,0:26:15.16:63,15,0	1/1:16,0:16:14.09:70,14,0	1/1:23,0:22:11.48:42,11,0	1/1:19,0:18:10.49:43,10,0	1/1:22,1:23:17.86:76,18,0	1/1:22,1:23:15.43:71,15,0	1/1:20,0:20:19.92:97,20,0	1/1:17,0:15:6.12:11,6,0	1/1:22,0:22:12.89:43,13,0	1/1:15,0:13:6.90:13,7,0	1/1:22,1:23:6.69:11,7,0	1/1:26,1:27:12.08:23,12,0	1/1:14,0:14:6.60:12,7,0	1/1:17,0:17:8.62:30,9,0	1/1:19,2:21:16.07:92,16,0	1/1:21,0:20:13.47:53,13,0	1/1:9,0:9:4.49:9,4,0	1/1:12,0:12:4.82:8,5,0	1/1:14,0:14:6.13:11,6,0	1/1:15,0:15:10.18:47,10,0	1/1:14,0:14:13.61:68,14,0	1/1:16,0:16:9.70:21,10,0	1/1:29,0:29:20.82:79,21,0	1/1:9,0:9:11.42:46,11,0
chr10	55361090	.	A	AT	6049.50	PASS	AB=0.690;AC=42;AF=0.750;AN=56;BaseQRankSum=-6.755;DP=442;FS=4.773;HRun=12;HaplotypeScore=46.8469;InbreedingCoeff=0.5657;MQ=66.35;MQ0=0;MQRankSum=-0.209;QD=16.31;ReadPosRankSum=0.422;VQSLOD=5.8389;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,19:20:48.08:467,48,0	0/0:6,0:6:14.91:0,15,109	0/1:7,0:5:0:0,0,0	0/0:6,0:5:1.53:0,2,35	1/1:8,19:27:23.07:367,23,0	1/1:4,7:11:18.03:175,18,0	0/1:2,6:10:1.88:163,0,2	1/1:14,0:29:50.84:254,51,0	1/1:1,8:9:24.04:234,24,0	1/1:2,18:23:46.89:454,47,0	1/1:3,8:12:14.18:169,14,0	1/1:0,8:8:24.04:234,24,0	0/0:12,0:12:26.83:0,27,197	0/0:18,0:18:38.72:0,39,284	1/1:1,13:14:36.06:350,36,0	0/0:27,1:28:6.36:0,6,288	0/1:11,21:34:22.95:481,0,23	1/1:5,12:17:11.15:270,11,0	1/1:5,11:16:33.01:307,33,0	1/1:6,10:16:5.14:212,5,0	0/1:1,4:5:12.90:49,0,13	1/1:4,10:14:30.04:288,30,0	1/1:2,11:15:4.30:235,4,0	1/1:5,18:23:26.17:416,26,0	1/1:5,12:17:5.14:212,5,0	1/1:7,14:22:16.26:336,16,0	1/1:3,12:17:16.78:289,17,0	1/1:2,3:5:9.49:88,9,0
chr10	55364068	.	T	TAGAGAG	2799.12	PASS	AB=0.883;AC=47;AF=0.904;AN=52;BaseQRankSum=-0.871;DP=735;FS=14.660;HRun=0;HaplotypeScore=218.3723;InbreedingCoeff=0.3204;MQ=52.24;MQ0=14;MQRankSum=-1.768;QD=4.22;ReadPosRankSum=1.645;VQSLOD=1.2045;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:24,7:31:5.99:119,6,0	1/1:9,0:9:5.97:45,6,0	1/1:33,0:17:3.85:8,4,0	0/1:61,0:25:2.84:3,0,68	1/1:12,7:20:0.46:1,0,0	1/1:23,0:25:12.23:122,12,0	./.	1/1:50,0:50:66.70:459,67,0	0/1:14,0:18:0:0,0,0	1/1:18,0:22:15.34:104,15,0	0/0:20,0:23:0.47:0,0,1	1/1:8,7:16:6.02:195,6,0	1/1:5,0:18:9.03:116,9,0	1/1:12,0:21:9.03:111,9,0	./.	1/1:14,0:14:6.48:104,6,0	1/1:17,0:17:15.51:348,16,0	1/1:19,0:20:11.62:123,12,0	1/1:26,0:26:4.99:24,5,0	0/1:25,0:28:0:0,0,0	1/1:18,0:18:6:52,6,0	1/1:22,11:35:3.01:97,3,0	1/1:19,10:31:12.04:298,12,0	1/1:5,12:19:12.04:330,12,0	1/1:35,0:41:2.51:7,3,0	1/1:31,0:39:16.33:105,16,0	1/1:18,0:24:14.24:92,14,0	1/1:14,0:18:6.16:23,6,0
chr10	55364085	.	A	ATG	428.33	PASS	AB=0.875;AC=2;AF=0.036;AN=56;BaseQRankSum=5.912;DP=714;FS=0.000;HRun=0;HaplotypeScore=175.2298;InbreedingCoeff=0.0695;MQ=47.95;MQ0=18;MQRankSum=-1.684;QD=6.21;ReadPosRankSum=1.255;VQSLOD=3.2910;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:25:14.70:0,15,169	0/0:10,0:10:17.95:0,18,201	0/0:24,0:10:20.56:0,21,279	0/0:58,0:20:40.51:0,41,601	0/0:21,0:20:21.86:0,22,400	0/0:29,0:29:37.30:0,37,419	0/0:21,0:19:3.30:0,3,48	0/1:32,16:47:99:452,0,1074	0/0:21,0:20:12.46:0,12,186	0/0:21,0:19:33.25:0,33,332	0/0:26,0:26:10.39:0,10,141	0/0:17,0:17:22.92:0,23,277	0/0:18,0:18:24:0,24,288	0/0:22,0:22:33.03:0,33,410	0/0:22,0:21:4.26:0,4,49	0/0:12,0:12:17.32:0,17,240	0/0:19,0:19:30.29:0,30,315	0/0:17,0:17:50.90:0,51,615	0/0:22,0:21:29.35:0,29,389	0/0:28,0:26:0.83:0,1,2	0/0:19,0:19:21.04:0,21,280	0/0:37,0:37:32.89:0,33,570	0/0:31,0:30:28.37:0,28,351	0/0:25,0:25:25.80:0,26,302	0/0:39,0:38:8.37:0,8,104	0/0:38,0:38:50.48:0,50,526	0/1:21,0:20:53.56:64,0,54	0/0:22,0:21:12.87:0,13,314
chr10	55364466	.	T	TCA	11119.56	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=19.543;DP=648;FS=8.551;HRun=0;HaplotypeScore=141.1884;InbreedingCoeff=0.9983;MQ=81.84;MQ0=0;MQRankSum=-18.919;QD=46.72;ReadPosRankSum=3.001;VQSLOD=5.4440;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:56:99:0,169,2679	0/0:8,0:8:24.08:0,24,391	0/0:30,0:30:87.29:0,87,1387	0/0:23,0:23:66.22:0,66,1026	0/0:21,0:21:60.20:0,60,976	1/1:3,15:16:48.15:868,48,0	1/1:0,15:14:42.14:771,42,0	0/0:24,0:24:66.22:0,66,1055	1/1:0,19:16:48.16:899,48,0	1/1:1,21:18:54.16:962,54,0	1/1:0,11:17:38.34:651,38,0	0/0:21,0:21:63.20:0,63,1001	0/0:21,0:21:63.22:0,63,1028	0/0:29,0:29:87.30:0,87,1415	1/1:0,26:22:63.22:1167,63,0	0/0:28,0:28:84.29:0,84,1363	0/0:37,0:37:99:0,105,1707	0/0:18,0:16:48.14:0,48,756	1/1:1,6:6:18.05:313,18,0	1/1:1,19:20:60.19:1093,60,0	1/1:1,11:12:36.04:643,36,0	0/0:36,0:36:99:0,108,1708	0/0:26,0:26:75.26:0,75,1220	0/0:32,0:32:93.24:0,93,1411	1/1:1,15:15:42.14:767,42,0	1/1:0,24:20:63.22:1198,63,0	1/1:1,30:26:72.25:1336,72,0	1/1:0,8:8:24.08:453,24,0
chr10	55364472	.	CA	C	6563.04	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=19.222;DP=638;FS=4.276;HRun=4;HaplotypeScore=141.5347;InbreedingCoeff=0.9973;MQ=79.63;MQ0=0;MQRankSum=-18.546;QD=28.29;ReadPosRankSum=2.919;VQSLOD=3.2269;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,165,2255	0/0:9,0:9:27.08:0,27,362	0/0:27,0:27:60.18:0,60,805	0/0:23,0:23:32.32:0,32,772	0/0:20,0:20:51.15:0,51,682	1/1:0,14:12:36.11:418,36,0	1/1:0,15:14:42.10:475,42,0	0/0:26,0:26:78.26:0,78,1092	1/1:0,19:16:48.14:554,48,0	1/1:2,21:18:49.70:568,50,0	1/1:4,10:14:38.45:400,38,0	0/0:21,0:21:60.20:0,60,840	0/0:21,0:21:60.20:0,60,839	0/0:28,0:28:78.25:0,78,1074	1/1:2,24:22:63.16:706,63,0	0/0:27,0:27:78.24:0,78,1059	0/0:37,0:37:99:0,108,1490	0/0:19,0:17:54.16:0,54,737	1/1:2,6:7:15.05:178,15,0	1/1:0,19:19:57.17:654,57,0	1/1:3,11:14:36.05:394,36,0	0/0:36,0:36:96.31:0,96,1328	0/0:26,0:26:75.25:0,75,1046	0/0:31,0:31:90.26:0,90,1238	1/1:0,15:14:39.11:451,39,0	1/1:2,23:21:60.17:694,60,0	1/1:4,28:26:69.20:792,69,0	1/1:0,8:8:24.07:280,24,0
chr10	55365465	.	C	CTCTCTCTCTCTCTT	6728.09	PASS	AB=1.000;AC=45;AF=0.804;AN=56;BaseQRankSum=3.403;DP=439;FS=36.877;HRun=0;HaplotypeScore=166.4707;InbreedingCoeff=0.1303;MQ=64.62;MQ0=13;MQRankSum=-5.284;QD=16.02;ReadPosRankSum=0.111;VQSLOD=2.1460;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:15:33.68:342,34,0	0/1:7,0:7:36.40:77,0,36	0/1:50,0:22:3.82:4,0,47	0/1:66,0:23:11.38:11,0,52	1/1:9,0:8:9.48:156,9,0	1/1:15,0:15:11.13:484,11,0	0/1:16,0:15:16.28:148,0,16	0/1:26,0:26:99:164,0,242	0/1:14,0:14:5.38:361,0,5	1/1:15,0:14:14.74:363,15,0	1/1:6,0:6:10.74:162,11,0	1/1:11,0:11:28.90:411,29,0	0/0:12,0:12:26.78:0,27,247	1/1:3,0:3:0.47:1,0,0	1/1:13,0:13:2.88:142,3,0	0/0:7,0:7:15.01:0,15,260	1/1:3,7:11:3.01:205,3,0	1/1:9,0:8:12.03:400,12,0	1/1:19,0:18:4.67:789,5,0	1/1:19,0:19:17.55:315,18,0	1/1:5,0:5:1.95:20,2,0	1/1:6,8:16:7.52:228,8,0	1/1:4,0:6:5.18:100,5,0	1/1:14,0:14:23.89:211,24,0	1/1:12,0:10:7.13:190,7,0	1/1:16,0:16:16.94:552,17,0	1/1:10,0:10:0.14:243,0,0	0/1:14,0:14:15.15:652,0,15
chr10	55365473	.	C	CTCTT	1711.09	PASS	AB=0.950;AC=23;AF=0.411;AN=56;BaseQRankSum=0.284;DP=392;FS=3.691;HRun=0;HaplotypeScore=78.4571;InbreedingCoeff=-0.5755;MQ=58.75;MQ0=14;MQRankSum=-0.073;QD=6.84;ReadPosRankSum=0.086;VQSLOD=1.5191;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:17,0:14:16.80:17,0,158	0/1:6,0:6:34.97:53,0,35	0/0:38,0:15:14.55:0,15,192	0/0:56,0:17:0.77:0,1,158	0/1:8,0:7:21.06:21,0,34	0/1:9,5:14:85.72:91,0,86	0/1:14,0:13:99:112,0,124	0/0:24,0:24:38.01:0,38,392	0/1:12,1:13:8.09:204,0,8	0/1:5,7:13:54.79:115,0,55	0/1:5,0:5:32.05:32,0,45	0/1:10,0:10:9.09:9,0,106	0/0:12,0:12:26.78:0,27,244	0/0:3,0:3:2.91:0,3,24	0/1:12,1:13:20.14:20,0,32	0/0:7,0:7:15:0,15,137	0/1:9,0:9:18.89:29,0,19	0/1:9,0:8:35.51:41,0,36	0/1:17,3:18:91.42:222,0,91	0/1:17,1:18:85.24:184,0,85	1/1:4,0:4:3.48:60,3,0	0/1:10,0:10:23.57:47,0,24	0/1:6,0:6:11.32:24,0,11	0/1:12,0:12:4.44:4,0,88	0/1:12,0:10:45.02:72,0,45	0/1:14,0:14:37.02:248,0,37	0/1:8,0:8:11.67:65,0,12	0/1:13,1:14:42.10:193,0,42
chr10	55367207	.	T	TA	8409.64	PASS	AB=0.630;AC=44;AF=0.786;AN=56;BaseQRankSum=-6.006;DP=585;FS=9.788;HRun=12;HaplotypeScore=57.3676;InbreedingCoeff=0.6699;MQ=58.88;MQ0=8;MQRankSum=1.798;QD=16.95;ReadPosRankSum=-0.912;VQSLOD=5.2727;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:12,21:35:17.26:607,17,0	1/1:7,4:11:18.02:170,18,0	0/0:12,0:4:2.93:0,3,22	0/0:17,0:11:8.86:0,9,64	1/1:8,22:31:63.25:568,63,0	1/1:8,16:25:32.84:296,33,0	1/1:4,14:19:7.97:225,8,0	0/0:28,2:28:18.42:0,18,294	1/1:4,7:12:20.84:181,21,0	1/1:8,15:23:6.87:337,7,0	1/1:5,24:31:68.58:602,69,0	1/1:3,11:13:30.05:292,30,0	0/0:16,0:16:38.76:0,39,282	0/0:12,0:14:36.88:0,37,253	1/1:3,10:15:29.72:261,30,0	1/1:3,15:18:36.06:350,36,0	1/1:8,35:43:36.44:839,36,0	1/1:4,25:28:72.12:701,72,0	1/1:5,8:11:11.19:255,11,0	1/1:4,21:25:35.04:474,35,0	0/1:8,9:18:29.56:97,0,30	1/1:2,9:12:5.09:201,5,0	1/1:4,18:24:13.82:269,14,0	0/1:5,11:16:16.65:177,0,17	1/1:4,15:19:27.04:261,27,0	1/1:4,18:22:34.98:485,35,0	1/1:11,15:27:23.41:511,23,0	1/1:0,9:10:26.88:248,27,0
chr10	55367297	.	G	GA	118.95	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=1.524;DP=630;FS=7.551;HRun=8;HaplotypeScore=101.1423;InbreedingCoeff=0.6303;MQ=63.14;MQ0=7;MQRankSum=-0.992;QD=3.84;ReadPosRankSum=-0.919;VQSLOD=-0.0775;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,1:36:48.84:0,49,680	1/1:3,5:8:18.05:205,18,0	0/1:23,0:11:15.70:16,0,124	0/0:41,0:17:25.16:0,25,187	0/0:24,0:24:54.01:0,54,489	0/0:21,0:20:54.03:0,54,493	0/0:31,0:31:63.02:0,63,575	0/0:31,0:31:59.99:0,60,542	0/0:10,0:10:21.01:0,21,192	0/0:25,0:24:54.02:0,54,494	0/0:29,0:29:78.02:0,78,708	0/0:13,0:13:21.01:0,21,191	0/0:11,0:11:23.81:0,24,200	0/0:11,0:11:30:0,30,270	0/0:15,0:15:33.02:0,33,301	0/0:20,0:20:51.01:0,51,462	0/0:35,0:35:93.04:0,93,851	0/0:21,0:21:51.02:0,51,466	0/0:21,0:18:45.01:0,45,411	0/0:24,0:24:72.03:0,72,654	0/0:13,0:13:27.01:0,27,247	0/0:22,0:22:66.04:0,66,604	0/0:23,0:23:53.92:0,54,493	0/0:35,0:35:75.03:0,75,686	0/0:16,0:16:29.76:0,30,259	0/0:30,0:30:90.04:0,90,820	0/0:34,0:33:74.99:0,75,681	0/0:7,0:7:13.56:0,14,114
chr10	55367319	.	CA	C	10438.79	PASS	AB=0.974;AC=45;AF=0.804;AN=56;BaseQRankSum=7.702;DP=660;FS=1.893;HRun=9;HaplotypeScore=81.9593;InbreedingCoeff=0.8678;MQ=68.33;MQ0=8;MQRankSum=-0.606;QD=19.30;ReadPosRankSum=4.963;VQSLOD=5.1070;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,33:40:53.50:718,54,0	1/1:1,7:8:24.01:219,24,0	0/1:37,1:21:14.76:15,0,341	0/0:39,1:17:20.10:0,20,193	1/1:2,23:25:66.03:603,66,0	1/1:1,20:20:57.03:522,57,0	1/1:3,27:30:72.04:659,72,0	0/0:28,0:28:72.19:0,72,808	1/1:2,9:11:17.58:164,18,0	1/1:1,24:25:71.99:647,72,0	1/1:2,32:34:90.03:820,90,0	1/1:2,8:10:9:82,9,0	0/0:14,0:14:39.12:0,39,450	0/0:20,0:20:54.16:0,54,622	1/1:3,16:19:36.01:329,36,0	0/0:16,0:16:39.10:0,39,440	1/1:9,21:30:72.03:657,72,0	1/1:3,18:21:57:514,57,0	1/1:9,15:19:13.38:363,13,0	1/1:3,23:26:69.03:631,69,0	1/1:3,8:11:18.01:165,18,0	1/1:4,15:19:36.01:329,36,0	1/1:2,25:27:56.69:521,57,0	1/1:5,28:33:66.03:604,66,0	1/1:2,15:17:29.77:274,30,0	1/1:3,33:36:67.22:835,67,0	1/1:5,24:29:66.03:604,66,0	1/1:1,6:7:18.01:165,18,0
chr10	55369864	.	CGT	C	8369.23	PASS	AB=0.783;AC=43;AF=0.768;AN=56;BaseQRankSum=8.699;DP=871;FS=3.475;HRun=0;HaplotypeScore=164.9225;InbreedingCoeff=0.5222;MQ=60.42;MQ0=12;MQRankSum=-0.614;QD=11.99;ReadPosRankSum=2.977;VQSLOD=4.8939;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:15,0:23:7.29:59,0,7	1/1:3,0:14:17.04:84,17,0	0/0:42,0:16:14.96:0,15,166	0/0:43,2:20:17.58:0,18,182	1/1:15,0:24:16.11:72,16,0	1/1:7,20:26:42.13:498,42,0	1/1:12,26:38:40.19:526,40,0	0/1:17,0:39:98.50:98,0,135	1/1:10,34:44:84.26:995,84,0	1/1:21,24:46:62.03:670,62,0	1/1:5,20:25:33.03:391,33,0	1/1:3,0:26:50.74:244,51,0	0/0:44,0:44:16.22:0,16,1178	0/1:24,4:27:78.06:78,0,719	1/1:13,33:47:24.46:742,24,0	0/0:39,2:41:36.99:0,37,1476	1/1:5,0:23:11.31:55,11,0	1/1:7,0:22:12.83:71,13,0	1/1:5,13:18:36.04:407,36,0	1/1:6,16:23:16.90:318,17,0	1/1:10,41:53:87.58:1115,88,0	1/1:4,0:20:22.73:111,23,0	0/1:6,0:9:1.49:9,0,1	1/1:11,0:35:13.89:69,14,0	1/1:5,17:26:47.47:482,47,0	0/1:26,3:29:37.42:37,0,772	1/1:6,21:29:42.69:550,43,0	1/1:9,19:29:60.01:689,60,0
chr10	55370068	.	A	AGT	4693.78	PASS	AB=1.000;AC=20;AF=0.357;AN=56;BaseQRankSum=-0.471;DP=966;FS=13.138;HRun=0;HaplotypeScore=287.1782;InbreedingCoeff=0.8238;MQ=42.45;MQ0=18;MQRankSum=-3.426;QD=13.89;ReadPosRankSum=-1.822;VQSLOD=3.0822;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,28:34:14.93:255,15,0	0/0:15,0:15:26.54:0,27,263	0/0:20,0:4:6.02:0,6,73	0/1:43,0:15:11.03:11,0,192	1/1:10,27:37:36.12:600,36,0	0/0:24,0:26:18.46:0,18,340	0/0:39,0:43:62.20:0,62,816	1/1:23,22:38:65.45:892,65,0	0/0:35,0:41:50.88:0,51,607	0/0:50,0:54:42.70:0,43,1029	0/0:26,0:28:21.05:0,21,290	1/1:13,22:34:18.53:307,19,0	0/0:52,0:52:66.28:0,66,1090	0/0:35,0:35:29.03:0,29,483	0/0:55,0:61:44.82:0,45,732	0/0:42,0:42:8.57:0,9,559	1/1:5,9:16:19.16:306,19,0	1/1:7,14:23:26.25:516,26,0	0/0:24,0:23:36.88:0,37,432	0/0:27,0:26:20.16:0,20,285	0/0:74,0:72:99:0,115,1634	1/1:9,9:18:18.06:305,18,0	1/1:10,15:25:39.13:636,39,0	1/1:9,27:36:51.17:855,51,0	0/0:17,0:19:23.65:0,24,294	0/0:31,0:32:50.87:0,51,778	0/0:26,0:31:37.75:0,38,545	0/1:22,0:24:9.95:10,0,306
chr10	55370071	.	G	GTA	2240.07	PASS	AB=0.981;AC=14;AF=0.250;AN=56;BaseQRankSum=7.261;DP=968;FS=6.762;HRun=0;HaplotypeScore=318.6458;InbreedingCoeff=0.4943;MQ=41.92;MQ0=19;MQRankSum=-0.796;QD=7.11;ReadPosRankSum=0.243;VQSLOD=2.0161;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:35,0:34:26.91:115,0,27	0/0:15,0:15:29.25:0,29,361	0/0:21,0:4:10.21:0,10,112	0/1:43,0:15:0.22:0,0,283	1/1:37,0:37:15.04:298,15,0	0/0:27,0:27:27.18:0,27,416	0/0:41,0:41:72.10:0,72,1040	0/1:48,3:43:99:463,0,118	0/0:42,0:42:66.81:0,67,884	0/0:56,0:56:99:0,146,1722	0/0:29,0:29:20.97:0,21,361	1/1:32,2:33:20.32:194,20,0	0/0:51,0:51:99:0,107,1527	0/0:34,1:35:32.77:0,33,637	0/0:59,2:61:65.53:0,66,997	0/0:43,0:43:43.18:0,43,773	0/1:17,0:17:21.09:155,0,21	1/1:21,0:21:22.77:302,23,0	0/0:24,0:23:55.36:0,55,641	0/0:30,0:27:18.99:0,19,429	0/0:74,0:71:99:0,129,2090	0/1:16,1:17:2.47:151,0,2	1/1:24,0:24:38.96:344,39,0	0/1:36,0:36:26.40:393,0,26	0/0:19,0:19:26.18:0,26,382	0/0:31,1:30:78.52:0,79,1094	0/0:30,0:30:68.12:0,68,846	0/0:23,0:23:28.97:0,29,575
chr10	55371028	.	TACACACAC	T	1966.51	PASS	AB=0.679;AC=16;AF=0.296;AN=54;BaseQRankSum=-0.067;DP=553;FS=26.127;HRun=0;HaplotypeScore=168.2639;InbreedingCoeff=0.3597;MQ=51.71;MQ0=15;MQRankSum=-3.101;QD=10.24;ReadPosRankSum=0.304;VQSLOD=1.0919;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:18:0,18,329	0/0:5,0:7:5.34:0,5,113	0/0:27,0:17:2.90:0,3,16	./.	0/0:17,0:19:9.03:0,9,209	0/1:7,11:16:35.19:142,0,35	0/1:13,10:21:8.31:70,0,8	0/0:31,0:30:29.90:0,30,323	0/0:8,8:16:2.86:0,3,19	0/1:14,3:15:28.83:265,0,29	0/1:4,4:7:0.10:0,0,0	0/0:26,0:25:14.65:0,15,346	0/0:15,0:15:21.47:0,21,411	0/0:15,0:15:7.30:0,7,389	0/1:11,13:24:23.71:287,0,24	0/0:11,0:18:12.03:0,12,322	0/0:27,0:26:26.20:0,26,513	0/0:27,0:27:38.93:0,39,601	1/1:11,1:9:8.90:150,9,0	0/1:10,14:23:10.60:215,0,11	0/0:18,15:31:11.51:0,12,111	0/0:16,0:16:11.99:0,12,190	0/0:16,0:15:18.04:0,18,431	0/0:23,0:23:14.98:0,15,299	1/1:9,4:14:2.95:76,3,0	1/1:8,12:20:35.64:610,36,0	1/1:10,9:20:11.70:237,12,0	1/1:4,5:9:3.01:76,3,0
chr10	55371873	.	C	CATCA	43255.28	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-11.616;DP=725;FS=1.678;HRun=0;HaplotypeScore=99.2231;InbreedingCoeff=0.9742;MQ=85.30;MQ0=2;MQRankSum=-10.100;QD=71.38;ReadPosRankSum=3.854;VQSLOD=6.9119;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,33:41:96.33:2684,96,0	1/1:1,1:2:6.02:166,6,0	0/0:34,0:34:99:0,99,1859	0/0:22,0:22:66.23:0,66,1242	1/1:2,28:32:78.22:2116,78,0	1/1:4,43:49:99:3759,135,0	1/1:7,16:28:63.18:1669,63,0	1/1:10,17:29:84.27:2243,84,0	1/1:2,19:22:63.22:1759,63,0	1/1:3,19:27:78.26:2043,78,0	1/1:4,16:21:54.19:1474,54,0	1/1:5,16:24:57.20:1576,57,0	0/0:20,0:20:60.21:0,60,1186	0/0:21,0:21:54.17:0,54,1042	1/1:5,26:32:87.26:2324,87,0	0/0:22,0:22:63.20:0,63,1213	1/1:3,25:27:60.68:1679,61,0	1/1:2,33:34:96.33:2685,96,0	1/1:5,15:20:60.21:1676,60,0	1/1:4,21:26:69.24:1928,69,0	1/1:1,19:21:54.19:1478,54,0	1/1:1,19:23:57.20:1592,57,0	1/1:2,18:22:54.14:1428,54,0	1/1:1,18:19:48.16:1342,48,0	1/1:2,22:24:63.22:1761,63,0	1/1:5,28:35:99:2791,105,0	1/1:1,29:31:93.32:2596,93,0	1/1:1,9:11:18.06:486,18,0
chr10	55372118	.	G	GTC	5204.70	PASS	AB=0.941;AC=25;AF=0.446;AN=56;BaseQRankSum=-1.093;DP=680;FS=1.433;HRun=0;HaplotypeScore=187.6755;InbreedingCoeff=0.4897;MQ=44.28;MQ0=29;MQRankSum=1.056;QD=13.81;ReadPosRankSum=2.127;VQSLOD=4.8678;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:25:26.63:0,27,326	0/0:8,0:8:0.47:0,0,1	0/1:30,0:7:3.43:3,0,31	0/0:48,0:5:1.25:0,1,35	0/0:22,0:19:17.41:0,17,207	1/1:30,0:29:19.16:316,19,0	0/1:34,0:34:5.96:129,0,6	0/0:43,0:43:63.70:0,64,915	1/1:16,3:19:27.33:493,27,0	1/1:23,4:26:48.79:831,49,0	1/1:17,4:20:1.81:109,2,0	0/0:16,0:16:20.83:0,21,206	0/0:20,0:20:30.67:0,31,334	0/0:23,0:23:24.40:0,24,266	0/1:15,1:16:2.90:216,0,3	0/1:17,0:14:18.34:18,0,200	0/0:22,0:21:40.67:0,41,456	0/1:14,0:14:6.65:7,0,326	0/1:12,15:22:48.15:473,0,48	1/1:23,3:26:24.26:325,24,0	0/1:20,0:19:2.03:173,0,2	0/0:19,0:16:15.03:0,15,176	0/0:32,0:30:23.38:0,23,281	0/0:22,0:20:5.62:0,6,78	1/1:21,3:24:29.89:475,30,0	1/1:25,4:29:10.56:765,11,0	1/1:28,3:29:46.32:658,46,0	1/1:12,0:10:15.51:212,16,0
chr10	55372124	.	CTG	C	3494.91	PASS	AB=0.901;AC=33;AF=0.589;AN=56;BaseQRankSum=-0.415;DP=669;FS=16.193;HRun=0;HaplotypeScore=190.3655;InbreedingCoeff=0.0066;MQ=43.13;MQ0=29;MQRankSum=2.264;QD=6.37;ReadPosRankSum=-4.207;VQSLOD=1.4706;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:25,6:28:75.54:76,0,163	0/1:9,0:9:0.02:1,0,0	0/1:26,0:6:7.25:7,0,30	0/0:41,0:4:3.93:0,4,24	0/1:13,9:19:47.52:48,0,98	1/1:23,4:26:38.03:316,38,0	1/1:9,23:32:8.97:69,9,0	0/1:39,0:39:9.91:10,0,479	1/1:20,2:22:33.34:288,33,0	0/1:26,2:28:51.33:365,0,51	1/1:19,2:20:5.06:85,5,0	0/1:12,4:16:70.02:70,0,164	0/1:19,1:20:9.21:9,0,191	0/0:24,0:23:26.65:0,27,211	1/1:11,6:17:22.83:213,23,0	0/1:17,0:14:58.27:58,0,113	0/1:21,2:22:49.59:50,0,250	0/0:14,0:14:9.30:0,9,204	0/1:28,0:23:65.95:213,0,66	1/1:27,1:28:13.25:231,13,0	1/1:16,1:16:0.65:80,1,0	0/0:15,6:18:14.85:0,15,128	0/1:17,15:30:99:106,0,131	0/0:17,3:18:5.99:0,6,49	1/1:22,1:23:38.70:320,39,0	0/1:25,4:29:15.81:450,0,16	1/1:29,1:28:11.02:317,11,0	1/1:8,3:9:13.80:114,14,0
chr10	55372126	.	G	GTCTC	2256.82	PASS	AB=1.000;AC=45;AF=0.865;AN=52;BaseQRankSum=-2.042;DP=665;FS=0.000;HRun=0;HaplotypeScore=220.4413;InbreedingCoeff=0.3280;MQ=43.32;MQ0=27;MQRankSum=-0.383;QD=4.10;ReadPosRankSum=0.551;VQSLOD=2.1674;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:31,0:28:13.15:79,13,0	1/1:9,0:9:0.47:1,0,0	./.	./.	1/1:23,0:20:5.83:38,6,0	1/1:25,1:25:13.60:97,14,0	0/0:34,0:35:2.99:0,3,25	1/1:41,0:41:7.30:43,7,0	1/1:21,1:22:21.01:292,21,0	1/1:28,1:28:33.76:304,34,0	0/0:18,3:20:1.79:0,2,6	1/1:16,0:16:17.32:149,17,0	1/1:12,9:21:5.36:119,5,0	1/1:8,4:24:6.02:136,6,0	0/1:17,0:17:3.80:11,0,4	1/1:17,0:14:15.40:108,15,0	1/1:22,0:21:11:121,11,0	0/1:13,0:13:17.09:45,0,17	1/1:25,0:20:4.80:34,5,0	1/1:29,0:29:14.38:108,14,0	1/1:17,0:16:1.25:3,1,0	1/1:22,0:19:5.95:79,6,0	1/1:32,0:30:11.61:74,12,0	0/1:20,0:18:0.06:1,0,0	1/1:22,1:23:5.74:38,6,0	1/1:29,0:29:35.81:330,36,0	1/1:29,0:27:16.83:151,17,0	1/1:12,0:10:0.88:2,1,0
chr10	55372140	.	C	CTG	646.72	PASS	AB=0.994;AC=19;AF=0.339;AN=56;BaseQRankSum=9.186;DP=681;FS=6.265;HRun=0;HaplotypeScore=201.0976;InbreedingCoeff=-0.3853;MQ=44.29;MQ0=33;MQRankSum=1.103;QD=1.57;ReadPosRankSum=6.205;VQSLOD=1.5128;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,1:32:29.60:0,30,252	0/0:10,0:10:4.90:0,5,31	1/1:24,0:2:2.03:5,2,0	0/0:44,0:8:13.56:0,14,129	0/0:27,1:25:21.05:0,21,204	0/1:25,0:24:22.63:23,0,172	0/1:34,0:34:33.66:34,0,93	0/0:37,0:36:95.12:0,95,670	0/1:22,0:22:78.88:96,0,79	0/1:23,0:23:99:108,0,185	0/1:23,0:22:10.52:11,0,51	0/1:15,1:16:6.89:7,0,87	0/1:24,0:24:1.20:1,0,281	0/1:22,0:21:8.64:9,0,40	0/1:18,0:18:69.68:70,0,110	0/0:22,0:19:44.23:0,44,341	0/1:22,1:22:22.50:22,0,203	0/0:14,0:13:10.68:0,11,170	0/1:26,0:22:43.30:43,0,153	0/1:28,0:28:35.29:35,0,117	0/1:19,0:18:33.49:33,0,123	0/0:21,0:19:12.80:0,13,90	0/0:34,1:33:14.16:0,14,199	0/0:18,2:18:5.56:0,6,43	0/1:19,0:19:43.28:84,0,43	0/1:27,0:27:99:110,0,177	0/1:27,0:25:9.37:89,0,9	0/1:12,0:11:19.96:20,0,68
chr10	55372144	.	C	CTCTG	1372.18	PASS	AB=0.980;AC=18;AF=0.321;AN=56;BaseQRankSum=1.279;DP=655;FS=3.909;HRun=0;HaplotypeScore=200.0284;InbreedingCoeff=-0.0630;MQ=44.64;MQ0=30;MQRankSum=-1.983;QD=3.94;ReadPosRankSum=4.521;VQSLOD=2.4101;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:34,1:32:18.22:228,0,18	0/0:7,0:7:7.19:0,7,54	1/1:19,0:1:1.25:3,1,0	0/0:49,0:10:22.94:0,23,165	0/1:28,1:26:21.94:167,0,22	0/0:25,0:24:15.55:0,16,181	0/0:33,0:33:22.60:0,23,144	0/0:28,0:27:45.24:0,45,333	0/1:20,0:20:74.04:99,0,74	0/1:21,0:20:36.85:37,0,148	0/0:23,0:22:10.95:0,11,76	1/1:15,1:16:0.60:132,1,0	0/1:26,0:26:40.26:40,0,259	0/1:20,0:19:37.89:81,0,38	0/0:20,0:20:30.82:0,31,203	0/0:24,0:21:22.21:0,22,330	0/1:20,1:20:10.29:226,0,10	0/1:15,0:14:46.23:77,0,46	0/0:22,0:20:47.13:0,47,324	0/0:25,0:25:12.30:0,12,129	0/0:19,0:18:25.45:0,25,161	0/1:20,0:19:1.45:128,0,1	0/1:30,1:30:46.98:199,0,47	1/1:19,1:18:5.92:50,6,0	0/0:19,0:19:17.67:0,18,96	0/1:25,0:25:53.06:53,0,149	0/1:26,0:24:8.34:8,0,116	0/0:12,0:11:23.14:0,23,153
chr10	55372253	.	TTAATC	T	6258.45	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=4.115;DP=624;FS=4.490;HRun=0;HaplotypeScore=146.4750;InbreedingCoeff=0.9860;MQ=64.55;MQ0=1;MQRankSum=6.768;QD=28.58;ReadPosRankSum=3.711;VQSLOD=4.2942;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,30:43:66.23:1224,66,0	0/0:8,0:15:36.04:0,36,646	0/0:27,0:22:36.12:0,36,836	0/0:34,0:29:32.57:0,33,643	1/1:8,20:28:57.16:1019,57,0	0/0:14,0:24:33.10:0,33,607	0/0:12,0:16:27.09:0,27,475	1/1:17,7:24:21:292,21,0	0/0:9,0:17:24.04:0,24,442	0/0:36,0:44:96.74:0,97,2179	0/0:18,0:23:42.11:0,42,667	1/1:8,13:21:36.12:668,36,0	0/0:22,0:22:45.15:0,45,1281	0/0:15,0:15:33.11:0,33,937	0/0:11,0:16:39.09:0,39,657	0/0:23,0:23:63.22:0,63,1720	1/1:8,10:18:21.07:389,21,0	1/1:4,13:17:36.12:667,36,0	0/0:15,0:17:18.06:0,18,440	0/0:16,0:24:45.95:0,46,796	0/0:12,0:14:9.03:0,9,157	1/1:12,17:29:48.16:887,48,0	1/1:7,9:16:30.10:556,30,0	1/1:9,14:23:30.10:556,30,0	0/0:12,0:17:30.10:0,30,577	0/0:17,0:24:51.16:0,51,1079	0/0:13,0:22:27.09:0,27,514	0/0:3,0:11:18.06:0,18,394
chr10	55372972	.	CG	C	13846.27	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=3.980;DP=618;FS=3.077;HRun=6;HaplotypeScore=62.7631;InbreedingCoeff=0.9950;MQ=92.71;MQ0=0;MQRankSum=-6.593;QD=27.10;ReadPosRankSum=4.177;VQSLOD=5.4229;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,35:40:99:1061,99,0	1/1:1,7:8:18.04:193,18,0	0/0:27,0:27:69.17:0,69,853	0/0:25,0:25:59.05:0,59,714	1/1:0,14:14:39.10:418,39,0	1/1:3,13:16:39.09:418,39,0	1/1:2,18:20:45.11:483,45,0	1/1:5,20:25:57.12:601,57,0	1/1:5,31:36:84.21:901,84,0	1/1:0,15:15:45.11:483,45,0	1/1:0,14:14:39.10:418,39,0	1/1:0,29:29:78.20:837,78,0	0/0:16,0:16:39.13:0,39,512	0/0:19,0:19:57.17:0,57,729	1/1:2,36:38:99:1095,102,0	0/0:20,0:19:57.19:0,57,750	1/1:1,37:38:99:1127,105,0	1/1:1,25:26:66.17:709,66,0	1/1:4,17:21:54.13:578,54,0	1/1:0,11:11:32.61:314,33,0	1/1:3,40:43:99:1189,111,0	1/1:3,15:18:39.05:406,39,0	1/1:1,8:9:18.02:193,18,0	1/1:2,24:26:57.14:612,57,0	1/1:1,10:11:21.05:224,21,0	1/1:1,18:19:54.04:556,54,0	1/1:1,23:24:66.17:708,66,0	1/1:1,9:10:30.07:321,30,0
chr10	55374164	.	AAG	A	203.16	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.197;DP=553;FS=3.816;HRun=0;HaplotypeScore=64.8087;InbreedingCoeff=0.9834;MQ=80.63;MQ0=0;MQRankSum=-0.520;QD=29.02;ReadPosRankSum=-0.703;VQSLOD=4.1355;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,120,2367	1/1:0,7:7:18.06:294,18,0	0/0:16,0:16:48.16:0,48,927	0/0:13,0:13:33.11:0,33,624	0/0:16,0:16:48.16:0,48,974	0/0:27,0:27:78.27:0,78,1563	0/0:16,0:16:45.15:0,45,887	0/0:23,0:23:69.22:0,69,1314	0/0:17,0:17:48.16:0,48,975	0/0:16,0:16:48.16:0,48,975	0/0:15,0:15:45.15:0,45,913	0/0:14,0:14:42.14:0,42,853	0/0:19,0:19:57.20:0,57,1158	0/0:25,0:25:75.26:0,75,1520	0/0:23,0:23:66.23:0,66,1309	0/0:19,0:19:57.18:0,57,1098	0/0:42,0:42:99:0,126,2543	0/0:14,0:14:42.13:0,42,816	0/0:13,0:13:39.13:0,39,759	0/0:12,0:12:36.12:0,36,696	0/0:33,0:33:99:0,99,1953	0/0:13,0:13:36.12:0,36,731	0/0:20,0:20:60.21:0,60,1203	0/0:30,0:30:90.31:0,90,1807	0/0:17,0:17:51.17:0,51,1020	0/0:19,0:19:57.20:0,57,1130	0/0:28,0:28:84.29:0,84,1705	0/0:6,0:6:18.06:0,18,366
chr10	55375827	.	GCACACA	G	3170.93	PASS	AB=0.668;AC=22;AF=0.458;AN=48;BaseQRankSum=4.398;DP=567;FS=0.000;HRun=0;HaplotypeScore=137.8566;InbreedingCoeff=0.6781;MQ=58.98;MQ0=10;MQRankSum=-5.745;QD=14.16;ReadPosRankSum=2.646;VQSLOD=2.2709;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:12.04:0,12,347	1/1:5,0:11:12.04:168,12,0	./.	./.	0/0:8,0:13:7.94:0,8,249	1/1:13,5:19:12.04:203,12,0	1/1:19,7:26:9.03:184,9,0	0/0:20,0:20:18.04:0,18,381	1/1:10,11:21:18.95:346,19,0	1/1:18,7:26:21.95:378,22,0	1/1:6,2:8:2.60:60,3,0	0/0:14,0:16:6.02:0,6,105	0/0:23,0:24:45.15:0,45,1366	0/0:17,0:18:39.13:0,39,1169	0/1:9,5:15:72.31:269,0,72	0/0:16,0:19:33.11:0,33,865	0/0:22,0:33:18.40:0,18,350	0/0:10,0:15:15.05:0,15,372	1/1:10,7:17:24.08:470,24,0	1/1:9,5:15:9.03:164,9,0	./.	0/0:15,0:21:5.08:0,5,107	0/0:14,0:16:2.94:0,3,18	0/0:21,0:32:11.89:0,12,297	1/1:9,10:20:21.07:385,21,0	1/1:16,4:21:15.02:248,15,0	0/1:9,13:23:59.76:483,0,60	./.
chr10	55376570	.	C	CGTGTGTGT	7990.89	PASS	AB=0.862;AC=31;AF=0.554;AN=56;BaseQRankSum=-4.592;DP=710;FS=11.599;HRun=0;HaplotypeScore=238.3491;InbreedingCoeff=0.0659;MQ=67.85;MQ0=6;MQRankSum=-6.990;QD=14.69;ReadPosRankSum=-2.036;VQSLOD=2.1031;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:44,0:43:99:104,0,297	0/0:8,0:8:12.03:0,12,149	0/0:61,0:29:25.48:0,25,474	0/0:45,0:24:8.97:0,9,291	0/1:21,0:21:6.91:7,0,175	0/1:9,19:28:1.71:357,0,2	0/1:11,11:23:18.98:119,0,19	0/1:21,0:29:22.19:190,0,22	1/1:9,17:28:16.73:728,17,0	1/1:10,20:32:77.68:1721,78,0	0/0:6,5:13:0.47:0,0,1	0/1:21,0:26:10.01:10,0,60	0/0:22,0:22:54.08:0,54,1008	0/0:17,0:17:39.13:0,39,929	1/1:8,8:17:9.03:277,9,0	0/1:21,1:22:82.51:83,0,770	0/1:29,0:33:99:127,0,114	0/1:21,0:21:99:99,0,137	1/1:10,11:21:47.09:626,47,0	1/1:10,0:14:3:25,3,0	0/1:17,13:32:0.01:0,0,0	0/1:26,0:28:34.08:120,0,34	0/1:18,0:19:8.28:110,0,8	0/1:32,0:35:56.93:57,0,289	1/1:7,4:12:2.97:20,3,0	1/1:16,10:27:66.12:1843,66,0	1/1:8,1:19:14.52:510,15,0	1/1:6,6:13:27.53:858,28,0
chr10	55376600	.	TGC	T	4022.67	PASS	AB=0.952;AC=19;AF=0.339;AN=56;BaseQRankSum=3.822;DP=539;FS=2.504;HRun=0;HaplotypeScore=152.0778;InbreedingCoeff=0.9055;MQ=54.61;MQ0=4;MQRankSum=4.232;QD=16.62;ReadPosRankSum=3.088;VQSLOD=3.5111;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:30,6:36:69.68:615,70,0	0/0:9,0:9:8.52:0,9,27	0/1:19,1:6:0:0,0,0	0/0:18,0:8:2.74:0,3,12	1/1:14,5:19:22.35:241,22,0	0/0:18,0:18:24:0,24,361	0/0:20,0:20:26.60:0,27,410	1/1:9,13:22:32.58:379,33,0	0/0:17,0:17:29.89:0,30,487	0/0:28,0:28:63.12:0,63,926	0/0:15,0:15:18.05:0,18,243	1/1:26,2:28:50.96:491,51,0	0/0:16,0:16:37.49:0,37,510	0/0:19,0:19:45.14:0,45,712	0/0:12,0:12:9.03:0,9,148	0/0:10,0:10:15.05:0,15,243	1/1:27,6:34:68.05:675,68,0	1/1:16,3:19:44.05:408,44,0	0/0:19,0:19:38.94:0,39,520	0/0:10,0:10:5.91:0,6,65	0/0:19,0:19:18.04:0,18,272	1/1:14,1:15:26.75:258,27,0	1/1:15,0:15:29.80:263,30,0	1/1:28,6:34:71.87:690,72,0	0/0:15,1:16:27.07:0,27,435	0/0:27,0:27:57.02:0,57,887	0/0:14,0:13:18.06:0,18,293	0/0:10,0:10:23.63:0,24,324
chr10	55377883	.	CT	C	11467.65	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=13.844;DP=714;FS=1.915;HRun=2;HaplotypeScore=67.8126;InbreedingCoeff=0.9999;MQ=92.83;MQ0=1;MQRankSum=-2.971;QD=35.72;ReadPosRankSum=3.222;VQSLOD=5.5075;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,123,1800	0/0:12,0:12:33.11:0,33,493	0/0:31,0:31:90.28:0,90,1289	0/0:28,1:29:68.93:0,69,1086	0/0:24,0:24:72.22:0,72,1041	1/1:0,14:14:42.14:545,42,0	1/1:0,26:26:66.21:857,66,0	0/0:47,0:46:99:0,135,1945	1/1:1,25:26:66.21:856,66,0	1/1:0,29:29:87.25:1108,87,0	1/1:0,26:26:78.20:979,78,0	0/0:24,0:24:72.23:0,72,1042	0/0:19,0:19:57.18:0,57,834	0/0:22,0:22:66.21:0,66,969	1/1:0,38:38:99:1285,99,0	0/0:25,0:25:75.25:0,75,1105	0/0:28,0:28:81.22:0,81,1169	0/0:16,0:16:42.14:0,42,621	1/1:1,21:22:63.17:777,63,0	1/1:0,15:15:45.10:565,45,0	1/1:0,47:47:99:1771,138,0	0/0:26,0:26:75.25:0,75,1121	0/0:17,0:17:51.13:0,51,739	0/0:32,0:32:96.33:0,96,1438	1/1:0,20:20:51.17:662,51,0	1/1:0,19:18:54.18:701,54,0	1/1:0,27:27:75.24:973,75,0	1/1:0,12:12:30.10:389,30,0
chr10	55378720	.	T	TAAC	10275.77	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-14.695;DP=655;FS=2.640;HRun=0;HaplotypeScore=92.2559;InbreedingCoeff=0.9773;MQ=66.99;MQ0=0;MQRankSum=-1.251;QD=34.48;ReadPosRankSum=2.913;VQSLOD=5.6637;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:58.74:0,59,836	0/0:9,0:9:24.08:0,24,337	0/0:31,0:27:42.05:0,42,558	0/0:34,0:30:45.13:0,45,593	0/0:20,0:21:39.10:0,39,527	1/1:8,11:19:33.11:662,33,0	1/1:9,15:24:48.16:941,48,0	0/0:28,0:28:33.11:0,33,462	1/1:6,19:25:51.18:1022,51,0	1/1:5,12:18:39.13:778,39,0	1/1:6,7:13:12.04:241,12,0	0/0:27,0:27:63.21:0,63,878	0/0:18,0:18:42.14:0,42,590	0/0:33,0:33:75.25:0,75,1050	1/1:4,16:21:39.13:759,39,0	0/0:10,0:10:21.07:0,21,295	0/0:26,0:26:62.40:0,62,851	0/0:29,0:29:69.20:0,69,937	1/1:12,11:21:33.10:603,33,0	1/1:8,8:16:24.08:481,24,0	1/1:12,21:33:6.09:861,6,0	0/0:13,0:13:27.09:0,27,378	0/0:12,0:12:20.55:0,21,276	0/0:31,0:31:72.24:0,72,1009	1/1:11,7:18:15.05:277,15,0	1/1:10,32:42:99:1922,99,0	1/1:10,16:26:51.18:1021,51,0	1/1:6,12:19:36.12:709,36,0
chr10	55378960	.	C	CGTGT	3865.58	PASS	AB=0.793;AC=36;AF=0.783;AN=46;BaseQRankSum=1.887;DP=658;FS=0.000;HRun=0;HaplotypeScore=152.7272;InbreedingCoeff=0.4966;MQ=47.89;MQ0=23;MQRankSum=-1.610;QD=8.50;ReadPosRankSum=-0.333;VQSLOD=2.8568;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:22,2:26:11.78:211,12,0	./.	./.	./.	1/1:5,5:11:2.68:71,3,0	1/1:27,0:25:1.49:116,1,0	1/1:25,0:27:5.68:91,6,0	0/0:27,0:28:4.66:0,5,46	1/1:15,0:16:6.91:102,7,0	1/1:25,0:22:21.53:270,22,0	1/1:12,0:12:3.01:45,3,0	0/1:28,6:36:4.26:673,0,4	0/0:17,0:15:15.05:0,15,239	0/0:33,0:35:18.16:0,18,556	0/1:13,0:16:0:0,0,0	0/1:7,0:12:0:0,0,0	1/1:32,10:39:36.12:776,36,0	1/1:9,4:17:26.52:444,27,0	1/1:22,0:18:13.75:154,14,0	./.	1/1:53,0:45:6:84,6,0	1/1:10,0:10:6.02:116,6,0	./.	1/1:14,8:20:11.82:228,12,0	0/1:15,0:16:0:0,0,0	1/1:26,0:25:28.25:302,28,0	1/1:18,0:18:9.01:112,9,0	1/1:9,0:9:6.02:70,6,0
chr10	55379005	.	GCA	G	739.85	PASS	AB=0.945;AC=24;AF=0.480;AN=50;BaseQRankSum=1.973;DP=377;FS=12.514;HRun=0;HaplotypeScore=82.9170;InbreedingCoeff=0.5519;MQ=38.13;MQ0=25;MQRankSum=-3.161;QD=4.77;ReadPosRankSum=-1.613;VQSLOD=1.3991;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:8,1:9:9.01:0,9,96	0/0:1,1:2:0:0,0,0	0/0:30,0:2:3.01:0,3,51	0/0:54,1:5:6.02:0,6,104	0/0:14,0:14:3.56:0,4,71	1/1:8,0:8:0.47:1,0,0	1/1:20,0:20:11.98:108,12,0	0/0:14,0:10:5.81:0,6,170	1/1:7,0:7:1.95:7,2,0	1/1:6,0:6:13.10:121,13,0	./.	0/1:14,0:15:13.73:14,0,205	0/0:10,0:10:21.07:0,21,412	0/0:19,0:19:38.92:0,39,682	1/1:12,0:12:2.98:24,3,0	0/0:9,0:9:5.81:0,6,121	0/0:12,1:13:19.65:0,20,209	0/0:14,0:14:13.31:0,13,253	1/1:11,0:8:15.94:85,16,0	./.	1/1:15,0:12:6:55,6,0	./.	0/0:13,0:13:5.99:0,6,76	0/1:19,1:20:1.31:1,0,29	1/1:11,0:11:0.68:2,1,0	1/1:15,1:16:21.52:287,22,0	1/1:10,0:10:15.04:168,15,0	1/1:3,0:3:3:29,3,0
chr10	55379006	.	CAT	C	1487.56	PASS	AB=0.989;AC=28;AF=0.560;AN=50;BaseQRankSum=-0.480;DP=365;FS=6.027;HRun=0;HaplotypeScore=77.2982;InbreedingCoeff=0.2465;MQ=38.20;MQ0=25;MQRankSum=-2.432;QD=7.51;ReadPosRankSum=-3.064;VQSLOD=2.0891;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:8:6.01:0,6,57	0/0:2,0:2:0:0,0,0	0/0:31,0:2:3.01:0,3,39	0/0:58,0:5:6.02:0,6,97	0/1:13,0:13:14.98:15,0,44	1/1:1,6:7:0.47:1,0,0	1/1:5,15:20:12.01:190,12,0	0/1:12,0:9:48.12:48,0,67	1/1:4,2:6:1.82:5,2,0	1/1:2,3:5:14.91:176,15,0	./.	0/1:15,0:15:37.70:38,0,143	0/0:10,0:10:21.06:0,21,388	0/0:19,0:19:36.08:0,36,574	1/1:3,8:11:3:49,3,0	0/0:9,0:9:6.01:0,6,119	0/1:14,0:13:14.71:15,0,119	0/1:13,0:14:31.29:31,0,192	1/1:3,7:7:20.94:199,21,0	./.	1/1:4,11:11:6.02:97,6,0	./.	0/0:13,0:13:5.99:0,6,60	0/1:19,0:19:15.46:38,0,15	1/1:1,9:10:0.68:1,1,0	1/1:5,10:15:37.62:457,38,0	1/1:0,9:9:15.05:237,15,0	1/1:1,2:3:2.98:47,3,0
chr10	55379024	.	CAT	C	45.41	PASS	AB=0.943;AC=8;AF=0.160;AN=50;BaseQRankSum=5.150;DP=391;FS=18.045;HRun=0;HaplotypeScore=79.9936;InbreedingCoeff=0.0908;MQ=33.92;MQ0=27;MQRankSum=-3.589;QD=0.50;ReadPosRankSum=-0.754;VQSLOD=0.2816;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:12,1:12:5.14:0,5,109	0/0:4,0:3:0:0,0,0	0/0:50,0:4:8.94:0,9,117	0/0:66,0:6:6.02:0,6,77	./.	0/1:11,0:11:0:0,0,0	0/0:21,0:21:18.61:0,19,167	0/0:6,0:1:2.92:0,3,17	0/0:5,0:4:0:0,0,0	0/1:7,0:6:29.42:29,0,144	0/0:4,0:4:3.01:0,3,39	0/0:14,0:13:11.24:0,11,371	0/0:11,0:9:18.06:0,18,364	0/0:18,0:18:27:0,27,414	0/0:6,0:5:3.01:0,3,40	0/0:6,0:6:9.03:0,9,175	0/1:12,5:13:59.16:59,0,117	0/0:11,1:11:21.72:0,22,355	0/0:6,0:4:9.01:0,9,112	./.	0/0:25,1:22:6.01:0,6,67	./.	0/1:14,0:14:3.14:3,0,100	0/1:14,0:13:0:0,0,0	1/1:11,2:13:0.21:1,0,0	0/1:13,2:15:48.13:48,0,324	0/0:8,0:8:5.88:0,6,50	0/0:2,0:2:2.98:0,3,21
chr10	55379025	.	ATG	A	56.59	PASS	AB=0.941;AC=8;AF=0.154;AN=52;BaseQRankSum=4.709;DP=404;FS=18.665;HRun=0;HaplotypeScore=82.2278;InbreedingCoeff=0.1273;MQ=33.47;MQ0=27;MQRankSum=-3.345;QD=0.60;ReadPosRankSum=-0.575;VQSLOD=0.3178;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:12,1:12:5.14:0,5,75	0/0:5,0:3:0:0,0,0	0/0:50,0:4:8.94:0,9,117	0/0:67,0:5:6.02:0,6,79	./.	0/1:10,1:11:0.02:0,0,0	0/0:20,1:21:5.11:0,5,86	0/0:6,0:1:3.01:0,3,37	0/0:8,0:5:0:0,0,0	0/1:8,1:6:46.34:46,0,76	0/0:4,0:4:2.84:0,3,14	0/0:14,0:13:11.22:0,11,260	0/0:13,0:10:18.06:0,18,314	0/0:18,0:18:26.97:0,27,370	0/0:6,0:5:2.87:0,3,15	0/0:6,0:6:9.03:0,9,162	0/1:15,2:13:33.67:34,0,75	0/0:12,0:11:20.88:0,21,234	0/0:7,0:5:11.95:0,12,131	./.	0/0:23,6:24:5.80:0,6,42	0/0:8,0:8:0:0,0,0	0/1:13,1:14:3.16:3,0,76	0/1:14,0:13:0:0,0,0	1/1:14,0:14:0.21:1,0,0	0/1:15,0:15:67.24:67,0,211	0/0:8,0:8:4.25:0,4,34	0/0:2,0:2:1.25:0,1,3
chr10	55379026	.	TGC	T	320.52	PASS	AB=0.989;AC=20;AF=0.385;AN=52;BaseQRankSum=5.277;DP=403;FS=0.912;HRun=0;HaplotypeScore=79.9726;InbreedingCoeff=0.0961;MQ=33.46;MQ0=30;MQRankSum=-3.086;QD=1.72;ReadPosRankSum=1.535;VQSLOD=1.5400;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:12,1:12:5.03:0,5,38	0/0:5,0:3:0:0,0,0	0/0:49,0:4:6.02:0,6,93	0/0:65,0:5:6.02:0,6,83	./.	0/1:11,0:11:0.02:0,0,0	0/1:21,0:21:25.21:53,0,25	0/0:5,1:1:2.88:0,3,15	1/1:7,0:5:2.76:20,3,0	0/1:9,0:6:14.63:72,0,15	1/1:4,0:4:2.68:11,3,0	0/0:13,1:13:7.70:0,8,110	0/0:14,0:10:17.95:0,18,216	0/0:18,0:18:22.27:0,22,269	1/1:7,0:5:2.59:10,3,0	0/0:6,0:6:9.01:0,9,137	0/1:17,0:13:4.22:41,0,4	0/1:12,0:11:7.79:8,0,84	0/0:6,0:4:10.65:0,11,61	./.	0/1:30,0:25:5.25:5,0,15	0/0:8,0:7:0:0,0,0	0/1:14,0:14:6.25:6,0,52	0/1:14,0:13:0:0,0,0	1/1:14,0:14:0.21:1,0,0	0/1:14,2:15:64.42:194,0,64	0/1:7,0:7:7.05:11,0,7	1/1:2,0:2:2.90:16,3,0
chr10	55379028	.	CGT	C	597.14	PASS	AB=0.950;AC=27;AF=0.519;AN=52;BaseQRankSum=1.351;DP=442;FS=0.000;HRun=0;HaplotypeScore=80.8800;InbreedingCoeff=0.2707;MQ=31.64;MQ0=45;MQRankSum=-1.260;QD=2.54;ReadPosRankSum=1.336;VQSLOD=1.6533;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:12:1.65:5,2,0	0/0:5,2:4:0:0,0,0	0/0:48,0:3:6.01:0,6,57	0/0:63,0:5:6.02:0,6,80	./.	0/1:11,1:12:0.01:0,0,0	1/1:18,7:23:12.03:142,12,0	0/0:10,0:1:2.99:0,3,23	1/1:14,2:10:1.35:4,1,0	1/1:11,2:8:10.26:99,10,0	1/1:0,4:4:3.01:36,3,0	0/1:15,0:13:1.44:10,0,1	0/0:16,0:12:9:0,9,117	0/0:18,0:18:12.04:0,12,175	1/1:4,3:5:3:35,3,0	0/0:7,0:6:6.02:0,6,96	0/0:16,0:12:4.59:0,5,12	0/1:11,0:10:4.52:77,0,5	0/1:5,0:4:8.62:9,0,35	./.	1/1:40,1:34:3:36,3,0	0/0:11,0:8:0:0,0,0	0/1:13,0:13:6.15:6,0,40	0/1:17,0:14:0:0,0,0	1/1:5,8:12:0.21:1,0,0	0/1:17,3:18:14.35:199,0,14	1/1:3,3:6:3.01:36,3,0	1/1:2,1:2:3.01:35,3,0
chr10	55379058	.	GGT	G	87.65	PASS	AB=0.974;AC=17;AF=0.327;AN=52;BaseQRankSum=0.975;DP=822;FS=1.055;HRun=0;HaplotypeScore=114.9413;InbreedingCoeff=0.0474;MQ=19.66;MQ0=257;MQRankSum=0.057;QD=0.18;ReadPosRankSum=1.592;VQSLOD=2.1933;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:7:5.23:0,5,46	0/0:15,0:6:9.01:0,9,95	./.	./.	0/0:14,0:11:3.01:0,3,49	0/0:15,0:14:6.52:0,7,53	0/1:50,1:34:37.63:38,0,82	0/0:41,0:3:3.01:0,3,49	0/1:38,1:13:18.14:18,0,49	0/1:36,0:18:30.05:30,0,74	0/0:13,0:6:1.25:0,1,3	0/1:33,0:19:4.84:5,0,23	0/1:26,2:15:18.06:18,0,31	0/0:27,0:20:19.29:0,19,225	1/1:22,2:7:2.92:17,3,0	0/0:14,0:7:5.99:0,6,57	0/0:33,0:18:11.26:0,11,36	0/0:17,0:12:17.99:0,18,143	1/1:47,1:3:3:29,3,0	1/1:8,0:5:2.37:8,2,0	0/1:105,2:50:0.01:0,0,0	0/0:12,0:9:0.47:0,0,1	0/1:21,0:11:5.28:5,0,16	0/0:38,0:20:0.80:0,1,2	0/1:27,4:24:5.53:6,0,25	0/1:31,0:17:13.75:14,0,105	0/0:13,0:9:10.79:0,11,53	1/1:7,1:4:3.01:33,3,0
chr10	55379099	.	GTA	G	463.30	PASS	AB=0.979;AC=21;AF=0.389;AN=54;BaseQRankSum=0.885;DP=648;FS=4.945;HRun=0;HaplotypeScore=96.4116;InbreedingCoeff=0.1271;MQ=29.99;MQ0=150;MQRankSum=-0.045;QD=1.12;ReadPosRankSum=-3.236;VQSLOD=0.9958;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:14:38.12:38,0,51	0/0:13,0:5:2.90:0,3,17	0/0:31,0:1:2.60:0,3,10	0/0:45,0:4:11.98:0,12,131	0/0:13,0:5:3.01:0,3,52	0/0:17,0:13:13.49:0,13,147	0/1:35,3:23:18.82:19,0,138	0/1:42,0:12:64.77:86,0,65	0/0:25,1:7:9.76:0,10,61	0/0:30,0:10:23.14:0,23,237	./.	0/1:29,1:22:1.60:59,0,2	0/1:20,0:10:22.70:23,0,36	0/1:30,0:24:59.83:60,0,219	1/1:16,1:6:0.89:2,1,0	0/0:17,0:8:11.80:0,12,109	1/1:22,0:12:3.59:30,4,0	1/1:17,1:12:26.12:159,26,0	0/1:27,0:1:0:0,0,0	0/1:10,0:5:0.26:0,0,26	0/1:52,2:20:0:0,0,0	1/1:16,1:12:6.42:35,6,0	1/1:11,0:5:11.61:75,12,0	0/1:24,1:19:18.58:19,0,65	0/1:24,0:15:4.41:4,0,65	0/0:24,0:11:25.32:0,25,193	0/0:7,0:7:1.34:0,1,41	0/0:6,0:4:0:0,0,0
chr10	55379115	.	TGTG	T	444.76	PASS	AB=0.879;AC=13;AF=0.250;AN=52;BaseQRankSum=2.343;DP=571;FS=7.666;HRun=0;HaplotypeScore=105.1299;InbreedingCoeff=0.1276;MQ=40.10;MQ0=84;MQRankSum=-4.004;QD=2.03;ReadPosRankSum=-2.402;VQSLOD=0.3904;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:17:26.73:0,27,511	0/0:10,0:5:4.02:0,4,71	0/1:68,0:11:21.85:22,0,156	0/0:76,0:7:13.98:0,14,174	0/0:9,0:6:5.99:0,6,66	0/1:11,3:11:52.58:57,0,53	0/0:30,1:18:0.09:0,0,1	0/0:35,0:19:42.09:0,42,758	1/1:9,4:4:5.94:100,6,0	0/1:18,0:7:87.21:94,0,87	./.	0/0:28,0:25:36.06:0,36,582	0/0:16,0:11:14.97:0,15,282	0/0:24,0:20:57.20:0,57,1287	0/1:6,3:4:0:0,0,0	0/1:18,0:11:16.95:17,0,104	0/0:16,0:10:10.42:0,10,233	0/0:17,0:13:30.05:0,30,567	./.	1/1:6,2:4:6.02:86,6,0	0/1:31,5:16:0.01:0,0,0	0/0:15,0:14:21.54:0,22,420	0/0:7,0:5:12.04:0,12,230	0/0:26,0:22:19.29:0,19,306	0/1:10,4:9:5.92:43,0,6	0/1:9,2:7:76.01:76,0,106	0/1:8,2:9:28.51:88,0,29	0/0:2,0:2:3.01:0,3,68
chr10	55379139	.	GTGC	G	279.66	PASS	AB=0.924;AC=19;AF=0.352;AN=54;BaseQRankSum=2.890;DP=588;FS=0.988;HRun=0;HaplotypeScore=92.6712;InbreedingCoeff=0.4658;MQ=42.90;MQ0=68;MQRankSum=-3.851;QD=1.29;ReadPosRankSum=-2.851;VQSLOD=1.4112;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:17:20.16:0,20,281	0/0:6,0:3:6.02:0,6,115	0/0:104,0:18:14.16:0,14,451	0/1:102,0:13:11.06:11,0,402	0/0:8,0:6:8.60:0,9,101	1/1:6,4:8:3.01:30,3,0	1/1:13,5:13:4.92:84,5,0	0/0:34,0:23:44.18:0,44,845	0/1:10,0:6:30.19:30,0,60	1/1:10,2:5:5.97:60,6,0	./.	0/0:30,0:25:43.92:0,44,664	0/0:13,0:10:18.06:0,18,384	0/0:25,0:23:54.18:0,54,1154	0/1:9,2:6:0:0,0,0	0/0:12,0:10:21.07:0,21,450	0/0:16,1:12:13.10:0,13,216	0/0:14,0:12:26.59:0,27,420	1/1:15,0:3:1.92:39,2,0	1/1:4,1:4:2.68:11,3,0	0/0:38,3:23:1.57:0,2,5	0/0:14,0:14:20.62:0,21,289	0/0:6,0:6:11.63:0,12,168	0/0:20,0:18:19.31:0,19,299	0/1:8,1:5:0:0,0,0	0/1:12,2:8:52.03:52,0,52	1/1:7,1:7:8.60:81,9,0	1/1:2,0:2:3.01:37,3,0
chr10	55379142	.	CTG	C	216.36	PASS	AB=0.935;AC=15;AF=0.300;AN=50;BaseQRankSum=2.813;DP=619;FS=38.335;HRun=0;HaplotypeScore=88.7104;InbreedingCoeff=0.1354;MQ=39.18;MQ0=81;MQRankSum=0.609;QD=1.03;ReadPosRankSum=1.644;VQSLOD=-0.7118;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:18,4:17:3.02:53,3,0	0/0:6,0:3:3.01:0,3,51	0/0:104,0:17:22.46:0,22,214	0/0:97,0:12:14.80:0,15,236	0/1:4,1:4:14.74:53,0,15	1/1:13,0:9:2.68:11,3,0	0/1:24,0:16:1.18:1,0,36	0/0:38,0:23:10.66:0,11,419	0/0:12,0:9:11.12:0,11,90	0/0:14,0:5:5.38:0,5,44	./.	0/1:29,2:25:25.23:59,0,25	0/0:12,0:10:18.04:0,18,274	0/0:23,0:21:43.03:0,43,689	./.	0/0:14,0:12:20.13:0,20,328	0/1:17,2:15:34.65:51,0,35	0/1:11,2:11:31.56:32,0,71	0/0:17,0:3:3.48:0,3,38	1/1:8,0:5:2.37:8,2,0	0/1:52,0:27:0:0,0,0	1/1:13,3:15:8.59:46,9,0	0/1:7,0:7:26.31:36,0,26	0/0:20,2:19:1.72:0,2,9	./.	0/0:13,0:7:6.67:0,7,53	0/0:7,0:6:1.92:0,2,17	0/0:1,0:1:2.68:0,3,11
chr10	55379199	.	G	GGT	255.05	PASS	AB=0.970;AC=16;AF=0.381;AN=42;BaseQRankSum=2.440;DP=743;FS=1.085;HRun=0;HaplotypeScore=83.6883;InbreedingCoeff=0.3146;MQ=21.65;MQ0=267;MQRankSum=2.612;QD=1.02;ReadPosRankSum=-1.065;VQSLOD=1.0701;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:15:5.61:46,6,0	./.	0/1:33,0:4:3.38:3,0,26	0/0:38,0:3:4.82:0,5,38	./.	1/1:20,0:10:2.97:20,3,0	0/0:58,0:32:10.81:0,11,126	./.	0/0:34,0:14:9.02:0,9,100	0/0:32,0:11:2.21:0,2,227	./.	1/1:39,1:21:1.09:3,1,0	0/0:24,0:16:22.26:0,22,237	0/0:28,0:18:8.68:0,9,94	./.	0/1:14,0:9:6.73:7,0,59	0/1:26,3:14:28.90:182,0,29	1/1:8,1:5:5.93:56,6,0	0/0:49,0:7:8.99:0,9,87	./.	0/0:81,0:36:8.99:0,9,93	0/1:22,0:12:0:0,0,0	0/0:14,1:7:2.72:0,3,20	0/1:29,1:14:0:0,0,0	0/1:11,0:5:0.01:0,0,0	0/0:39,0:18:13.57:0,14,95	1/1:11,0:10:0.59:55,1,0	./.
chr10	55379209	.	TGTG	T	542.50	PASS	AB=0.981;AC=17;AF=0.354;AN=48;BaseQRankSum=5.200;DP=686;FS=0.942;HRun=0;HaplotypeScore=77.9732;InbreedingCoeff=0.2459;MQ=21.86;MQ0=193;MQRankSum=0.517;QD=2.44;ReadPosRankSum=-1.321;VQSLOD=1.3314;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:20,1:12:5.37:26,5,0	./.	0/0:62,0:5:12.03:0,12,136	0/0:65,0:4:8.55:0,9,159	./.	1/1:16,1:9:3.01:49,3,0	0/1:50,2:31:99:115,0,142	0/0:21,0:5:2.60:0,3,10	0/0:28,0:14:2.56:0,3,108	0/1:27,0:11:17.95:18,0,324	./.	0/0:29,0:17:1.21:0,1,37	0/0:17,0:12:23.91:0,24,323	0/0:24,0:18:8.95:0,9,100	1/1:18,1:7:3.01:38,3,0	0/0:12,0:8:4.09:0,4,64	0/0:29,0:17:29.86:0,30,372	0/1:9,0:4:11.52:12,0,60	0/0:41,0:6:9.03:0,9,126	./.	0/0:68,1:33:8.99:0,9,147	0/1:18,0:13:0:0,0,0	0/0:12,0:6:2.97:0,3,20	0/0:24,0:12:2.93:0,3,44	1/1:8,2:6:3.79:38,4,0	0/1:30,2:17:56.61:229,0,57	1/1:10,2:10:9.02:123,9,0	1/1:5,0:1:3.01:38,3,0
chr10	55379220	.	TGC	T	353.86	PASS	AB=0.973;AC=30;AF=0.600;AN=50;BaseQRankSum=2.807;DP=467;FS=0.000;HRun=0;HaplotypeScore=66.5730;InbreedingCoeff=0.1247;MQ=24.44;MQ0=73;MQRankSum=-0.473;QD=1.50;ReadPosRankSum=0.071;VQSLOD=1.2872;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:14,1:10:0.31:0,0,0	./.	0/0:63,0:6:15.41:0,15,189	0/0:68,1:4:9.02:0,9,97	0/0:9,0:7:2.68:0,3,11	0/0:8,1:8:0.37:0,0,1	0/1:31,0:20:9.32:27,0,9	1/1:9,0:4:2.92:17,3,0	1/1:15,0:10:8.12:44,8,0	0/1:14,1:7:19.72:54,0,20	./.	0/1:18,0:10:17.34:18,0,17	0/1:8,0:8:9.34:38,0,9	1/1:20,0:18:6.29:51,6,0	1/1:9,0:6:2.60:10,3,0	1/1:8,0:7:3.85:18,4,0	0/1:23,0:19:25.17:25,0,87	0/1:6,0:6:11.79:34,0,12	1/1:19,0:5:5.97:45,6,0	./.	0/0:40,0:21:2.90:0,3,20	0/0:12,2:12:0:0,0,0	1/1:9,0:7:2.85:22,3,0	0/0:14,0:12:2.35:0,2,10	1/1:5,0:5:2.64:12,3,0	1/1:13,1:9:7.97:27,8,0	1/1:7,0:7:6.37:35,6,0	1/1:3,0:2:4.50:16,4,0
chr10	55379222	.	CG	C	273.52	PASS	AB=0.872;AC=18;AF=0.360;AN=50;BaseQRankSum=5.343;DP=423;FS=5.490;HRun=1;HaplotypeScore=68.1076;InbreedingCoeff=0.3164;MQ=25.71;MQ0=60;MQRankSum=-0.604;QD=2.63;ReadPosRankSum=1.940;VQSLOD=-0.4058;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:12,0:9:0:0,0,0	./.	0/0:66,0:7:18.53:0,19,269	0/0:69,0:4:8.08:0,8,123	0/0:9,0:7:3.01:0,3,43	1/1:5,2:7:3.01:42,3,0	0/1:17,5:14:84.64:85,0,86	1/1:10,0:6:2.22:7,2,0	0/0:8,4:9:3.54:0,4,45	0/1:12,2:7:23.85:24,0,102	./.	0/0:14,0:10:12.20:0,12,104	0/0:12,0:11:11.74:0,12,128	0/0:18,0:17:10.63:0,11,68	1/1:7,2:6:3.01:35,3,0	1/1:8,0:7:3.09:9,3,0	0/0:19,1:16:30.04:0,30,394	0/0:6,0:6:11.92:0,12,122	0/0:12,1:4:5.87:0,6,35	./.	0/0:29,3:15:2.60:0,3,44	0/0:13,0:12:0:0,0,0	0/0:9,0:7:2.96:0,3,19	0/0:14,0:13:2.69:0,3,43	1/1:1,2:4:2.85:18,3,0	0/1:6,2:5:18.40:78,0,18	1/1:3,2:6:8.92:83,9,0	1/1:2,1:2:3.48:33,3,0
chr10	55379224	.	TGA	T	657.12	PASS	AB=0.987;AC=35;AF=0.700;AN=50;BaseQRankSum=1.261;DP=417;FS=1.073;HRun=0;HaplotypeScore=63.1860;InbreedingCoeff=0.1830;MQ=26.51;MQ0=52;MQRankSum=-1.834;QD=2.41;ReadPosRankSum=-0.829;VQSLOD=0.8519;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:12,0:9:0.31:1,0,0	./.	0/0:68,0:7:12.92:0,13,78	0/1:70,0:4:5.05:5,0,8	0/0:10,0:8:2.68:0,3,11	1/1:6,0:6:2.90:17,3,0	1/1:14,5:13:12.62:108,13,0	1/1:12,0:8:7.17:48,7,0	1/1:9,2:9:9.01:45,9,0	1/1:11,2:7:11.48:85,11,0	./.	0/1:13,0:10:12.41:40,0,12	0/1:14,0:13:6.39:61,0,6	1/1:17,0:16:8.51:65,9,0	1/1:6,1:5:2.73:25,3,0	1/1:10,0:9:6.84:43,7,0	0/1:19,0:16:14.83:15,0,89	0/1:6,0:6:13.28:32,0,13	1/1:13,0:3:2.99:23,3,0	./.	0/0:28,1:14:2.89:0,3,21	0/0:13,0:12:0:0,0,0	1/1:8,0:7:2.46:10,2,0	0/0:14,0:13:2.07:0,2,8	1/1:2,2:4:2.64:12,3,0	1/1:5,2:5:10.78:72,11,0	1/1:4,2:6:8.83:63,9,0	1/1:2,1:2:1.73:22,2,0
chr10	55379225	.	GA	G	269.35	PASS	AB=0.947;AC=17;AF=0.354;AN=48;BaseQRankSum=5.160;DP=407;FS=2.169;HRun=1;HaplotypeScore=64.0124;InbreedingCoeff=0.2125;MQ=26.91;MQ0=47;MQRankSum=-0.709;QD=2.84;ReadPosRankSum=0.667;VQSLOD=-0.3869;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,2:8:2.60:10,3,0	./.	0/0:70,0:7:18.52:0,19,247	0/0:71,0:5:8.04:0,8,99	0/0:10,0:8:2.99:0,3,23	1/1:4,2:6:2.04:6,2,0	0/1:16,1:13:14.10:66,0,14	0/1:12,0:8:9.15:9,0,19	0/1:11,0:9:28.15:28,0,31	0/1:8,1:5:12.43:51,0,12	./.	0/0:14,0:10:10.99:0,11,56	0/0:13,1:13:14.37:0,14,100	0/0:15,1:16:10.41:0,10,53	1/1:7,0:5:3.01:30,3,0	0/0:9,1:9:0.18:0,0,27	0/0:18,0:16:29.85:0,30,240	0/0:8,0:8:14.72:0,15,109	0/0:12,0:3:2.60:0,3,10	./.	0/0:24,2:12:1.40:0,1,4	./.	0/0:8,0:7:2.98:0,3,22	0/0:11,2:12:5.67:0,6,47	1/1:4,1:5:3.01:32,3,0	0/1:7,1:5:15.43:53,0,15	1/1:6,0:6:8.63:62,9,0	1/1:2,0:2:6.01:63,6,0
chr10	55379233	.	GT	G	934.61	PASS	AB=0.892;AC=19;AF=0.380;AN=50;BaseQRankSum=3.464;DP=440;FS=6.572;HRun=1;HaplotypeScore=70.4042;InbreedingCoeff=0.4325;MQ=29.61;MQ0=43;MQRankSum=-1.603;QD=6.07;ReadPosRankSum=0.431;VQSLOD=0.3630;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:16,0:13:1.65:2,0,68	0/0:5,0:5:3.01:0,3,38	0/0:66,0:8:22.85:0,23,269	0/0:69,0:7:21.02:0,21,246	0/0:10,0:8:3.01:0,3,48	0/1:8,0:7:1.07:1,0,30	0/1:16,5:17:18.15:162,0,18	0/0:12,0:9:9.03:0,9,116	1/1:9,3:9:8.78:71,9,0	0/1:8,3:7:21.61:113,0,22	./.	0/0:14,0:11:15.52:0,16,192	0/0:12,0:12:5.12:0,5,188	0/0:16,0:16:13.85:0,14,153	1/1:6,1:6:5.98:59,6,0	0/0:10,0:9:11.26:0,11,146	0/0:21,0:20:36.12:0,36,551	0/0:9,0:9:21.07:0,21,303	1/1:12,2:5:5.51:48,6,0	./.	0/1:26,5:16:27.68:72,0,28	./.	0/0:8,0:7:3.01:0,3,39	0/0:16,0:15:5.70:0,6,95	1/1:4,6:10:17.02:170,17,0	1/1:7,4:7:15.52:194,16,0	1/1:3,4:6:12:135,12,0	1/1:2,3:3:6.02:75,6,0
chr10	55379234	.	T	TG	1119.99	PASS	AB=0.951;AC=20;AF=0.385;AN=52;BaseQRankSum=2.804;DP=440;FS=5.075;HRun=1;HaplotypeScore=71.4811;InbreedingCoeff=0.5219;MQ=30.35;MQ0=41;MQRankSum=-1.260;QD=7.04;ReadPosRankSum=-0.177;VQSLOD=0.5582;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:15,1:13:1.82:2,0,68	0/0:5,0:5:3.01:0,3,38	0/0:64,0:8:19.87:0,20,233	0/0:68,0:8:18.05:0,18,215	0/0:10,0:8:3.01:0,3,38	0/0:9,0:8:4.37:0,4,38	1/1:16,5:17:12.78:206,13,0	0/0:12,0:9:8.99:0,9,95	1/1:11,1:9:9.03:121,9,0	0/1:11,0:7:24.25:117,0,24	./.	0/0:14,0:11:13.57:0,14,143	0/0:13,0:12:1.76:0,2,160	0/0:14,1:16:13.59:0,14,156	1/1:6,1:6:6.49:86,6,0	0/0:10,0:9:11.26:0,11,132	0/0:20,0:20:36.12:0,36,462	0/0:9,0:9:21.06:0,21,256	1/1:14,0:5:5.38:46,5,0	./.	0/1:29,2:17:28.64:71,0,29	0/1:11,1:12:0:0,0,0	0/0:8,0:7:2.88:0,3,38	0/0:15,1:15:5.68:0,6,77	1/1:11,0:11:20.23:218,20,0	1/1:10,1:8:17.42:213,17,0	1/1:6,1:6:11.71:130,12,0	1/1:5,0:3:6.02:81,6,0
chr10	55379675	.	GA	G	4507.63	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=11.680;DP=505;FS=0.000;HRun=9;HaplotypeScore=61.6606;InbreedingCoeff=0.9916;MQ=61.74;MQ0=9;MQRankSum=1.388;QD=19.43;ReadPosRankSum=2.613;VQSLOD=5.1238;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:40:99:0,108,1191	0/0:5,0:5:12.92:0,13,137	0/0:18,0:7:15.80:0,16,113	0/0:15,0:11:21.78:0,22,211	0/0:28,0:28:29.66:0,30,517	1/1:2,15:17:28.94:296,29,0	1/1:1,16:16:24.01:220,24,0	0/0:18,0:18:51.08:0,51,560	1/1:0,11:11:30.02:275,30,0	1/1:5,13:17:36:324,36,0	1/1:5,17:20:38.95:357,39,0	0/0:12,0:12:33.10:0,33,381	0/0:10,0:10:24.02:0,24,261	0/0:20,0:20:42.12:0,42,485	1/1:2,15:17:39.02:357,39,0	0/0:14,0:14:30.09:0,30,346	0/0:25,0:24:66.15:0,66,737	0/0:22,0:20:56.84:0,57,629	1/1:0,9:8:24:215,24,0	1/1:2,11:12:27.01:247,27,0	1/1:4,16:20:36.01:329,36,0	0/0:10,0:10:18.04:0,18,197	0/0:12,0:12:33.06:0,33,346	0/0:21,0:21:60.18:0,60,692	1/1:2,23:23:51.03:467,51,0	1/1:4,18:22:51.01:466,51,0	1/1:2,23:24:33.03:544,33,0	1/1:1,15:15:45.02:412,45,0
chr10	55379983	.	G	GA	4487.71	PASS	AB=0.657;AC=23;AF=0.411;AN=56;BaseQRankSum=-12.475;DP=496;FS=8.512;HRun=11;HaplotypeScore=63.1943;InbreedingCoeff=0.6794;MQ=69.65;MQ0=1;MQRankSum=-1.236;QD=17.13;ReadPosRankSum=0.601;VQSLOD=5.6381;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:1,0:28:48.89:0,49,141	0/0:11,0:12:25.94:0,26,192	0/0:13,1:14:7.77:0,8,69	0/1:12,0:8:14.39:20,0,14	0/0:3,0:17:28.49:0,28,82	0/1:3,9:12:5.16:134,0,5	0/1:3,8:12:42.83:140,0,43	0/0:23,1:25:45.82:0,46,331	0/1:6,16:22:4.32:313,0,4	1/1:13,19:32:16.61:518,17,0	1/1:3,11:14:11.58:283,12,0	0/0:1,0:13:22.40:0,22,65	0/0:19,0:19:44.70:0,45,341	0/0:14,1:16:10.43:0,10,254	0/1:2,10:13:0.02:215,0,0	0/0:10,0:11:25.93:0,26,192	0/0:4,0:32:56.90:0,57,193	0/0:4,0:10:12.22:0,12,35	1/1:3,15:18:29:289,29,0	1/1:2,17:20:56.78:524,57,0	1/1:2,10:12:24.93:245,25,0	0/0:0,0:6:12.22:0,12,35	0/0:0,0:15:24.43:0,24,70	0/0:1,0:15:24.44:0,24,71	1/1:4,14:18:21.81:392,22,0	1/1:7,13:21:35.85:331,36,0	1/1:8,20:31:42.40:567,42,0	1/1:6,15:22:36.57:517,37,0
chr10	55380675	.	G	GA	917.09	PASS	AB=1.000;AC=36;AF=0.667;AN=54;BaseQRankSum=5.020;DP=477;FS=0.646;HRun=13;HaplotypeScore=85.1769;InbreedingCoeff=0.5141;MQ=39.57;MQ0=42;MQRankSum=-3.615;QD=2.92;ReadPosRankSum=0.387;VQSLOD=0.1558;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:18,2:20:20.22:116,20,0	0/0:5,0:5:2.04:0,2,6	0/0:45,0:5:11.71:0,12,79	0/0:40,0:6:6.41:0,6,42	1/1:10,0:10:7.90:35,8,0	1/1:15,0:14:6.91:27,7,0	0/0:4,0:8:6.57:0,7,25	0/0:19,0:21:3.28:0,3,85	1/1:16,0:16:10.07:40,10,0	0/1:17,0:16:7.40:24,0,7	1/1:19,0:17:2.13:6,2,0	1/1:13,0:13:14.72:80,15,0	0/0:13,0:13:29.63:0,30,200	0/1:13,0:13:1.58:2,0,107	0/1:15,0:14:8.15:8,0,13	1/1:4,12:15:21.02:195,21,0	1/1:14,0:15:16.17:70,16,0	1/1:13,0:11:5.90:38,6,0	0/0:22,0:18:12.80:0,13,76	1/1:23,0:21:13.62:81,14,0	./.	1/1:7,0:12:12.09:55,12,0	1/1:5,1:12:8.58:44,9,0	1/1:10,1:11:11.63:74,12,0	1/1:22,0:22:21.62:93,22,0	0/1:22,0:20:23.81:24,0,31	1/1:21,0:20:13.46:57,13,0	1/1:6,0:4:5.36:22,5,0
chr10	55380685	.	A	AAAAAAG	6023.46	PASS	AB=0.711;AC=41;AF=0.732;AN=56;BaseQRankSum=2.913;DP=490;FS=2.025;HRun=0;HaplotypeScore=98.2850;InbreedingCoeff=0.6069;MQ=43.03;MQ0=30;MQRankSum=-3.570;QD=16.55;ReadPosRankSum=-2.237;VQSLOD=3.9756;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,14:25:20.03:443,20,0	0/0:6,0:6:6.02:0,6,71	0/0:44,0:5:11.94:0,12,96	0/0:37,0:6:11.53:0,12,87	1/1:6,6:13:17.98:356,18,0	1/1:2,0:13:8.69:156,9,0	1/1:8,0:8:13.37:58,13,0	0/1:32,0:27:45.43:220,0,45	1/1:1,0:12:12.04:271,12,0	1/1:4,0:24:41.18:371,41,0	1/1:8,0:17:6.53:34,7,0	1/1:11,0:11:18.41:284,18,0	0/0:12,0:12:33.01:0,33,416	0/0:13,0:13:25.66:0,26,440	0/1:3,0:10:16.50:79,0,17	0/0:14,0:13:11.90:0,12,138	1/1:15,0:15:26.40:338,26,0	1/1:13,0:11:20.24:373,20,0	1/1:2,0:27:30.26:352,30,0	1/1:2,0:23:29.43:504,29,0	1/1:4,0:4:2.99:25,3,0	1/1:10,1:11:20.25:261,20,0	1/1:9,1:12:12.03:271,12,0	1/1:2,8:11:14.53:306,15,0	1/1:0,0:26:24.08:540,24,0	0/1:4,0:20:12.10:284,0,12	1/1:1,0:21:15.52:358,16,0	1/1:1,0:9:6.02:138,6,0
chr10	55380687	.	AAG	A	83.98	PASS	AB=0.950;AC=10;AF=0.179;AN=56;BaseQRankSum=-2.727;DP=459;FS=3.232;HRun=0;HaplotypeScore=89.6421;InbreedingCoeff=-0.0484;MQ=44.03;MQ0=25;MQRankSum=-2.614;QD=0.70;ReadPosRankSum=-4.769;VQSLOD=0.1477;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:20,0:20:30.46:30,0,96	1/1:6,0:6:5.96:44,6,0	0/0:44,0:5:11.97:0,12,118	0/0:36,0:7:14.77:0,15,105	0/0:12,0:12:23.90:0,24,211	0/1:10,0:10:7.37:7,0,55	0/1:8,0:8:11.36:33,0,11	0/0:33,0:28:45.74:0,46,452	0/0:11,0:11:2.11:0,2,89	0/0:20,0:20:12.12:0,12,218	0/0:16,0:15:5.15:0,5,40	0/1:10,1:11:21.81:22,0,66	0/0:11,0:11:33.04:0,33,371	0/0:13,0:13:33.89:0,34,384	0/1:9,0:8:8.41:8,0,48	0/0:12,1:12:12:0,12,171	0/1:15,2:17:1.09:1,0,202	0/0:11,1:10:14.80:0,15,123	0/1:28,0:27:19.05:19,0,282	0/0:22,0:22:26.44:0,26,252	0/0:4,0:4:5.99:0,6,49	0/1:8,3:11:52.36:52,0,117	0/0:13,0:13:17.76:0,18,140	0/0:11,0:11:4.79:0,5,73	0/0:26,0:26:18.31:0,18,209	0/0:21,0:20:3.77:0,4,238	0/0:13,0:13:15.03:0,15,154	0/0:8,0:8:6.02:0,6,66
chr10	55380807	.	GAAAA	G	4229.81	PASS	AB=0.643;AC=26;AF=0.464;AN=56;BaseQRankSum=3.890;DP=501;FS=10.824;HRun=16;HaplotypeScore=108.5098;InbreedingCoeff=0.7951;MQ=62.33;MQ0=16;MQRankSum=-4.760;QD=19.31;ReadPosRankSum=4.143;VQSLOD=2.5220;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:9,1:29:4.28:0,4,246	0/0:4,0:10:18.04:0,18,212	0/0:57,0:19:28.40:0,28,321	0/0:38,0:12:13.71:0,14,215	0/0:6,0:18:24.58:0,25,174	1/1:11,10:21:35.86:437,36,0	1/1:3,9:11:18.01:225,18,0	0/1:12,2:24:16.66:17,0,375	0/1:6,8:14:43.97:252,0,44	1/1:5,7:11:17.98:234,18,0	1/1:5,11:18:25.84:292,26,0	0/0:4,0:11:23.46:0,23,140	0/0:7,0:10:27.07:0,27,503	0/0:10,0:11:18.06:0,18,356	1/1:4,6:9:14.93:175,15,0	0/0:13,0:13:30.10:0,30,638	0/0:11,0:28:44.28:0,44,282	0/0:12,0:22:30.01:0,30,193	1/1:5,4:10:17.70:192,18,0	1/1:8,13:21:35.93:463,36,0	1/1:1,2:3:6.02:79,6,0	0/0:3,0:9:13.91:0,14,75	0/0:3,0:13:13:0,13,132	0/0:4,0:12:7.95:0,8,62	1/1:4,8:13:20.37:293,20,0	1/1:4,15:19:22.70:458,23,0	1/1:0,16:15:35.91:473,36,0	1/1:5,17:24:51.08:639,51,0
chr10	55382156	.	GCATGTT	G	3581.37	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=9.093;DP=273;FS=33.151;HRun=0;HaplotypeScore=56.2419;InbreedingCoeff=0.8396;MQ=106.39;MQ0=0;MQRankSum=-9.724;QD=54.26;ReadPosRankSum=1.506;VQSLOD=1.8512;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:39.13:0,39,1404	0/0:1,0:1:3.01:0,3,108	0/0:20,0:21:57.90:0,58,1666	0/0:17,0:17:45.13:0,45,1350	0/0:19,0:19:57.20:0,57,1995	1/1:0,5:5:15.05:360,15,0	1/1:0,3:3:9.03:216,9,0	0/0:35,0:35:99:0,105,3717	1/1:2,3:5:9.03:216,9,0	1/1:0,8:8:21.07:483,21,0	1/1:0,3:3:6.02:144,6,0	0/0:11,0:11:24.08:0,24,866	0/0:8,0:8:24.08:0,24,864	0/0:5,0:5:12.04:0,12,375	1/1:3,4:7:12.04:288,12,0	0/0:10,0:10:27.08:0,27,891	0/0:12,0:12:21.07:0,21,757	0/0:11,0:11:24.08:0,24,865	1/1:1,4:5:12.04:288,12,0	1/1:1,1:2:3.01:72,3,0	1/1:0,3:3:6.02:144,6,0	0/0:12,0:12:27.04:0,27,974	0/0:8,0:8:24.08:0,24,857	0/0:18,0:18:42.14:0,42,1492	1/1:2,1:2:3.01:72,3,0	1/1:2,11:13:33.11:793,33,0	1/1:2,6:8:18.06:432,18,0	1/1:0,1:1:3.01:72,3,0
chr10	55382217	.	CATATATATATATATAT	C	1084.49	PASS	AB=1.000;AC=9;AF=0.409;AN=22;BaseQRankSum=4.134;DP=151;FS=10.935;HRun=0;HaplotypeScore=66.9069;InbreedingCoeff=0.3625;MQ=70.37;MQ0=3;MQRankSum=-2.825;QD=23.58;ReadPosRankSum=2.491;VQSLOD=0.5830;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	0/0:13,0:6:0.47:0,0,1	1/1:2,13:15:18.06:574,18,0	./.	./.	0/0:32,0:32:68.85:0,69,1918	0/0:3,0:2:2.99:0,3,24	./.	./.	./.	0/0:4,0:5:9.02:0,9,427	./.	./.	./.	1/1:0,15:15:3.01:135,3,0	1/1:2,4:6:3.01:135,3,0	./.	./.	./.	1/1:2,3:5:2.57:135,3,0	./.	./.	0/0:2,0:2:3.01:0,3,167	0/1:5,0:5:42.28:205,0,42	0/0:1,0:1:3.01:0,3,180	./.
chr10	55382606	.	TACACAC	T	4862.77	PASS	AB=0.719;AC=23;AF=0.426;AN=54;BaseQRankSum=0.420;DP=585;FS=3.062;HRun=0;HaplotypeScore=152.5359;InbreedingCoeff=0.8042;MQ=62.02;MQ0=8;MQRankSum=-7.705;QD=20.01;ReadPosRankSum=0.378;VQSLOD=4.5039;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:43:21.07:0,21,484	0/0:3,0:6:9.03:0,9,116	0/0:26,0:18:3.01:0,3,59	0/0:16,0:10:3.01:0,3,44	0/0:11,0:20:42.14:0,42,1082	1/1:11,15:27:23.11:389,23,0	0/1:14,9:22:56.86:183,0,57	0/0:18,0:19:2.67:0,3,8	1/1:8,18:26:33.11:655,33,0	1/1:10,13:23:34.41:710,34,0	1/1:8,12:20:9.03:161,9,0	0/0:13,0:28:30.09:0,30,702	0/0:20,0:23:45.15:0,45,1363	0/0:23,0:25:57.19:0,57,1605	1/1:7,14:23:3.08:427,3,0	0/0:17,0:20:24.08:0,24,604	0/0:8,0:22:33.11:0,33,906	0/0:5,0:12:21.07:0,21,528	1/1:12,7:16:21.02:333,21,0	1/1:7,10:17:23.98:358,24,0	./.	0/0:9,0:13:33.11:0,33,787	0/0:13,0:13:27.09:0,27,824	0/0:27,0:30:48.16:0,48,1403	1/1:4,10:15:21.07:361,21,0	1/1:9,9:19:24.96:477,25,0	1/1:10,12:22:17.75:337,18,0	1/1:1,8:9:24.08:473,24,0
chr10	55384487	.	AAAAAAAAAAAG	A	605.86	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=1.648;DP=532;FS=4.733;HRun=0;HaplotypeScore=183.2020;InbreedingCoeff=0.8388;MQ=49.80;MQ0=10;MQRankSum=2.053;QD=27.54;ReadPosRankSum=0.445;VQSLOD=2.8362;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:38.28:0,38,790	0/0:10,0:10:27.09:0,27,927	0/0:27,0:7:12.54:0,13,206	0/0:34,0:9:6.59:0,7,25	0/0:26,0:25:68.90:0,69,2554	0/0:25,0:25:69.51:0,70,1578	0/0:15,0:15:32.78:0,33,889	1/1:3,19:19:46.66:701,47,0	0/0:23,0:23:66.22:0,66,2192	0/0:23,0:22:49.67:0,50,1788	0/0:23,0:22:51.14:0,51,1758	0/0:10,0:10:26.58:0,27,620	0/0:17,0:17:45.57:0,46,1824	0/0:13,0:13:32.94:0,33,1023	0/0:21,0:21:51.12:0,51,1377	0/0:14,0:14:24.05:0,24,397	0/0:21,0:21:51.05:0,51,1870	0/0:11,0:11:29.40:0,29,830	0/0:21,0:20:48.02:0,48,1031	0/0:26,0:24:69.09:0,69,1537	0/0:9,0:9:9.03:0,9,126	0/0:28,0:28:76.86:0,77,2651	0/0:20,0:19:51.97:0,52,1638	0/0:16,0:16:19.98:0,20,856	0/0:13,0:12:27.05:0,27,883	0/0:18,0:18:54.15:0,54,1607	0/0:18,0:18:42.54:0,43,1074	0/0:14,0:14:36.05:0,36,686
chr10	55384492	.	AAAAAAG	A	302.29	PASS	AB=0.684;AC=3;AF=0.054;AN=56;BaseQRankSum=2.584;DP=537;FS=4.186;HRun=0;HaplotypeScore=145.2445;InbreedingCoeff=0.4946;MQ=46.59;MQ0=11;MQRankSum=2.180;QD=8.64;ReadPosRankSum=-0.952;VQSLOD=1.9442;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:37.44:0,37,464	0/0:10,0:10:25.05:0,25,493	0/0:30,0:8:1.47:0,1,104	0/0:36,0:7:6.24:0,6,23	0/0:25,0:24:65.15:0,65,1328	0/0:25,0:25:37.71:0,38,714	0/0:16,0:16:30.57:0,31,423	1/1:22,0:19:48.69:364,49,0	0/0:22,0:22:62:0,62,1181	0/0:22,0:21:42.43:0,42,858	0/0:23,0:22:44.07:0,44,897	0/0:10,0:10:23.58:0,24,320	0/0:17,0:17:39.08:0,39,937	0/0:14,0:14:35.20:0,35,543	0/0:21,0:21:46.19:0,46,663	0/1:7,6:13:43.98:44,0,55	0/0:20,0:20:51.04:0,51,1063	0/0:11,0:11:21.31:0,21,413	0/0:21,0:20:32.09:0,32,473	0/0:27,0:25:55.10:0,55,722	0/0:9,0:9:7.66:0,8,39	0/0:28,0:28:68.57:0,69,1511	0/0:19,0:18:41.64:0,42,863	0/0:14,0:14:29.35:0,29,527	0/0:13,0:12:26.80:0,27,491	0/0:22,0:22:48.88:0,49,832	0/0:19,0:19:40.25:0,40,566	0/0:14,0:14:17.97:0,18,279
chr10	55384493	.	A	AG	2491.57	PASS	AB=0.878;AC=17;AF=0.304;AN=56;BaseQRankSum=0.684;DP=545;FS=13.578;HRun=0;HaplotypeScore=103.6843;InbreedingCoeff=0.7616;MQ=46.10;MQ0=11;MQRankSum=0.460;QD=12.10;ReadPosRankSum=5.564;VQSLOD=3.6973;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,5:14:33.88:269,34,0	0/0:10,0:10:25.94:0,26,174	0/0:31,0:8:9.21:0,9,65	0/1:39,0:7:3.45:3,0,21	1/1:11,14:24:48.57:458,49,0	0/0:25,0:25:64.47:0,64,422	0/0:16,0:16:34.25:0,34,237	0/1:22,0:19:5.57:6,0,138	0/0:22,0:22:62.65:0,63,440	0/0:22,0:21:52.05:0,52,389	0/0:23,0:22:46.33:0,46,357	1/1:7,5:12:13.83:206,14,0	0/0:16,0:16:34.96:0,35,306	0/0:14,0:14:35.72:0,36,295	0/0:22,0:22:46.06:0,46,279	0/0:13,0:13:23.82:0,24,205	1/1:2,17:20:40.20:421,40,0	1/1:4,7:11:15.12:157,15,0	0/0:21,0:20:50.28:0,50,373	0/0:27,0:25:50.29:0,50,403	0/0:9,0:9:4.59:0,5,26	1/1:12,16:28:69.03:643,69,0	0/1:8,11:18:8.38:316,0,8	1/1:10,6:16:16.42:209,16,0	0/0:13,0:12:22.99:0,23,135	0/0:22,0:22:56.33:0,56,354	0/0:21,0:21:43.43:0,43,266	0/0:12,0:12:28.37:0,28,203
chr10	55384524	.	AAGAGAG	A	8528.09	PASS	AB=0.833;AC=43;AF=0.768;AN=56;BaseQRankSum=1.876;DP=456;FS=19.382;HRun=0;HaplotypeScore=107.5388;InbreedingCoeff=0.8061;MQ=42.59;MQ0=17;MQRankSum=-3.752;QD=27.42;ReadPosRankSum=1.939;VQSLOD=3.2988;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,10:16:9.92:333,10,0	0/0:2,0:2:5.99:0,6,58	0/0:41,0:10:8.53:0,9,161	0/0:69,0:12:24.02:0,24,380	1/1:8,12:20:38.83:429,39,0	1/1:2,4:5:11.95:170,12,0	1/1:3,9:12:12.04:259,12,0	1/1:21,0:19:32.56:500,33,0	1/1:3,9:12:18.06:374,18,0	1/1:6,17:21:41.88:814,42,0	1/1:3,8:10:14.77:96,15,0	1/1:0,10:10:24.04:449,24,0	0/0:13,0:13:24.08:0,24,715	0/0:9,0:9:18.06:0,18,492	1/1:6,7:13:18.02:324,18,0	0/0:9,0:9:12.04:0,12,310	0/1:16,4:20:36.06:270,0,36	1/1:5,4:9:12.04:234,12,0	1/1:6,11:17:32.70:455,33,0	1/1:4,7:10:17.97:250,18,0	1/1:3,6:8:14.96:200,15,0	1/1:10,14:24:38.52:752,39,0	1/1:9,5:13:17.97:295,18,0	1/1:2,10:12:18.06:379,18,0	1/1:3,7:10:17.96:298,18,0	1/1:1,12:13:36.12:756,36,0	1/1:3,14:17:35.56:728,36,0	1/1:2,9:10:9.03:163,9,0
chr10	55384542	.	GAGAAA	G	313.91	PASS	AB=0.982;AC=15;AF=0.268;AN=56;BaseQRankSum=9.410;DP=490;FS=15.671;HRun=0;HaplotypeScore=134.0071;InbreedingCoeff=-0.1570;MQ=45.26;MQ0=21;MQRankSum=-8.643;QD=1.60;ReadPosRankSum=8.047;VQSLOD=0.6885;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:17,0:17:35.74:36,0,183	0/0:2,0:3:9.03:0,9,153	0/0:58,0:8:3.38:0,3,242	0/0:87,0:14:34.76:0,35,621	0/0:21,0:21:19.29:0,19,345	0/1:8,0:6:0.88:1,0,71	0/1:14,0:14:5.96:6,0,286	0/1:14,6:19:50.58:249,0,51	0/1:11,0:11:10.02:10,0,108	0/1:19,0:18:10.56:11,0,169	0/0:11,0:10:12.04:0,12,173	0/1:11,0:11:20.88:21,0,29	0/0:11,0:11:30.10:0,30,810	0/0:8,0:8:21.07:0,21,542	0/1:11,0:11:0.43:0,0,144	0/0:10,0:10:21.07:0,21,542	0/0:16,0:16:8.04:0,8,356	0/0:9,0:9:11.53:0,12,261	0/0:15,0:14:17.11:0,17,331	0/0:12,0:12:8.13:0,8,243	0/0:13,0:12:11.78:0,12,257	0/1:20,0:20:31.95:32,0,74	0/1:10,0:10:2.85:3,0,232	0/1:13,0:13:18.27:18,0,34	0/1:11,0:11:3.97:4,0,175	1/1:12,0:12:10.41:43,10,0	0/1:19,0:19:24.17:24,0,168	0/0:16,0:15:11.21:0,11,246
chr10	55384562	.	GGA	G	332.71	PASS	AB=0.942;AC=15;AF=0.300;AN=50;BaseQRankSum=2.181;DP=508;FS=20.188;HRun=0;HaplotypeScore=115.1543;InbreedingCoeff=-0.3069;MQ=43.74;MQ0=33;MQRankSum=0.803;QD=1.62;ReadPosRankSum=2.149;VQSLOD=0.3340;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:19:9.91:0,10,113	./.	./.	./.	0/0:22,0:22:3.01:0,3,43	0/1:10,0:9:35.39:35,0,94	0/1:15,3:18:62.96:63,0,277	0/0:26,0:24:1.61:0,2,5	0/1:9,1:9:52.90:54,0,53	0/1:15,1:15:35.89:36,0,73	0/0:12,0:11:0.93:0,1,146	0/0:12,0:13:5.96:0,6,45	0/1:11,0:10:33.21:42,0,33	1/1:5,1:4:3.01:33,3,0	0/1:12,1:14:61.96:62,0,115	0/0:11,0:11:12.04:0,12,171	0/1:15,0:18:4.04:4,0,120	0/1:9,0:11:1.52:2,0,107	0/0:12,0:11:15.04:0,15,189	0/1:17,0:18:2.03:2,0,151	0/1:14,1:12:23.92:24,0,59	0/0:23,0:25:6.02:0,6,73	0/0:11,0:12:8.79:0,9,64	0/0:14,0:15:9.43:0,9,72	0/1:9,2:11:26.75:27,0,39	0/0:14,0:13:12.04:0,12,166	0/1:21,2:22:74.40:74,0,114	0/1:23,1:21:8.20:8,0,248
chr10	55385600	.	TCAAAC	T	4283.72	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=11.182;DP=648;FS=1.489;HRun=0;HaplotypeScore=113.0495;InbreedingCoeff=0.9835;MQ=65.47;MQ0=12;MQRankSum=0.248;QD=20.30;ReadPosRankSum=5.998;VQSLOD=4.1762;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,24:30:24.08:446,24,0	0/0:7,0:7:12.04:0,12,343	0/0:33,0:18:22.68:0,23,288	0/0:47,0:31:25.77:0,26,452	1/1:7,19:26:49.70:698,50,0	0/0:22,0:22:54.19:0,54,1294	0/0:29,0:29:48.15:0,48,1014	0/0:23,0:21:26.12:0,26,456	0/0:19,0:19:45.15:0,45,1023	0/0:31,0:29:77.29:0,77,1833	0/0:14,0:13:30.09:0,30,652	1/1:8,14:22:12.04:223,12,0	0/0:20,0:20:57.19:0,57,1341	0/0:16,0:16:27.09:0,27,611	0/0:22,0:22:54.19:0,54,1402	0/0:17,0:17:42.07:0,42,1032	1/1:14,27:41:36.09:669,36,0	1/1:6,16:22:39.13:725,39,0	0/0:24,0:20:21.04:0,21,457	0/0:21,0:21:50.18:0,50,972	0/0:25,0:25:51.17:0,51,1266	1/1:5,14:19:39.13:664,39,0	1/1:6,16:22:16.89:318,17,0	1/1:10,18:28:30.10:540,30,0	0/0:14,0:14:18.06:0,18,471	0/0:20,0:20:33.10:0,33,795	0/0:26,0:26:54.17:0,54,1326	0/0:7,0:7:21:0,21,283
chr10	55385822	.	T	TA	3755.10	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=12.474;DP=617;FS=3.460;HRun=5;HaplotypeScore=79.6250;InbreedingCoeff=0.9135;MQ=72.02;MQ0=2;MQRankSum=0.153;QD=19.16;ReadPosRankSum=2.795;VQSLOD=3.2666;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,26:31:33.20:732,33,0	0/0:17,0:17:38.41:0,38,193	0/0:19,0:14:26.79:0,27,251	0/1:21,0:14:12.08:12,0,100	1/1:12,11:23:18.96:371,19,0	0/0:27,0:27:81.20:0,81,870	0/0:21,0:21:57.13:0,57,604	0/0:9,0:19:43.96:0,44,387	0/0:19,0:19:42.10:0,42,451	0/0:31,0:31:93.23:0,93,994	0/0:14,0:14:39.09:0,39,413	1/1:2,16:18:16.84:271,17,0	0/0:27,0:27:72.18:0,72,773	0/0:14,0:14:42.09:0,42,443	0/0:29,0:29:81.18:0,81,861	0/0:23,0:23:63.16:0,63,677	1/1:5,22:27:57.18:805,57,0	1/1:4,7:12:17.89:196,18,0	0/0:24,0:24:66.06:0,66,676	0/0:34,0:34:96.22:0,96,1021	0/0:22,0:22:60.13:0,60,637	1/1:3,18:22:33.36:493,33,0	1/1:5,23:28:16.05:511,16,0	1/1:2,12:14:30.09:363,30,0	0/0:24,0:24:69.17:0,69,741	0/0:16,0:16:42.11:0,42,451	0/0:26,0:26:72.14:0,72,754	0/0:15,0:15:30.54:0,31,323
chr10	55386835	.	A	AGTGTGT	2103.82	PASS	AB=1.000;AC=27;AF=0.500;AN=54;BaseQRankSum=-1.476;DP=371;FS=34.529;HRun=0;HaplotypeScore=139.7017;InbreedingCoeff=0.6127;MQ=52.59;MQ0=2;MQRankSum=-3.544;QD=11.56;ReadPosRankSum=-4.382;VQSLOD=0.0080;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:5.91:0,6,84	1/1:5,0:8:6.02:121,6,0	./.	0/0:11,0:8:4.51:0,5,109	0/0:17,0:17:9.03:0,9,126	1/1:15,2:17:17.77:161,18,0	1/1:8,5:13:2.63:83,3,0	0/0:29,0:29:26.28:0,26,538	1/1:2,1:4:3.01:87,3,0	1/1:15,3:18:23.10:544,23,0	1/1:7,3:10:2.76:14,3,0	0/0:16,0:16:18.06:0,18,252	0/0:4,0:4:6.02:0,6,126	0/0:12,0:12:21.06:0,21,385	1/1:9,0:9:3.01:82,3,0	0/0:10,0:10:21.07:0,21,428	0/0:13,0:13:15.05:0,15,210	0/0:10,0:10:3.01:0,3,42	1/1:10,4:13:9.03:182,9,0	1/1:15,0:15:3.01:36,3,0	1/1:12,0:11:5.03:31,5,0	0/0:13,0:13:9:0,9,104	0/0:12,0:12:9.03:0,9,126	0/0:13,0:13:6.02:0,6,84	0/1:19,0:19:10.37:138,0,10	1/1:17,4:21:30.10:597,30,0	1/1:11,0:11:9.03:130,9,0	1/1:11,0:11:3.01:83,3,0
chr10	55386840	.	GTGTGTGTGTGTGTGTGTGCGCGCGTGCGTGCA	G	6878.86	PASS	AB=0.815;AC=15;AF=0.278;AN=54;BaseQRankSum=5.880;DP=366;FS=21.872;HRun=0;HaplotypeScore=261.4013;InbreedingCoeff=0.7069;MQ=48.34;MQ0=2;MQRankSum=-4.606;QD=64.89;ReadPosRankSum=5.805;VQSLOD=2.0541;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:17,5:22:84.68:489,0,85	0/0:8,0:8:12.04:0,12,705	0/0:12,0:3:6.02:0,6,354	0/0:11,0:8:19.93:0,20,1222	1/1:8,7:15:21.07:1214,21,0	0/0:16,0:16:27.09:0,27,723	0/0:13,0:13:6.02:0,6,211	0/0:31,0:31:60.21:0,60,3912	./.	0/0:18,0:18:36.12:0,36,1871	0/0:12,0:12:11.83:0,12,291	1/1:5,8:13:18.06:1494,18,0	0/0:4,0:4:12.04:0,12,1020	0/0:13,0:13:33.11:0,33,3824	0/0:9,0:9:6.01:0,6,173	0/0:11,0:11:30.10:0,30,3553	1/1:7,5:12:15.05:1245,15,0	1/1:8,3:11:3.01:249,3,0	0/0:11,0:10:15.05:0,15,759	0/0:12,0:12:6:0,6,239	0/0:13,0:12:9.03:0,9,339	1/1:7,4:11:9.03:718,9,0	1/1:7,4:11:12.04:972,12,0	1/1:5,6:11:6.02:498,6,0	0/0:20,0:20:18.33:0,18,639	0/0:21,0:21:43.96:0,44,2166	0/0:10,0:11:15.05:0,15,727	0/0:11,0:11:3.01:0,3,266
chr10	55386857	.	T	TGTGTGTGCGCGCGCGCGCGCGCGC	8098.61	PASS	AB=0.890;AC=24;AF=0.429;AN=56;BaseQRankSum=-5.024;DP=318;FS=19.259;HRun=0;HaplotypeScore=199.9259;InbreedingCoeff=0.5271;MQ=46.08;MQ0=4;MQRankSum=-3.354;QD=40.09;ReadPosRankSum=-3.261;VQSLOD=2.1030;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:6:5.91:0,6,335	0/1:7,0:7:33.52:34,0,112	0/0:14,0:7:18.03:0,18,529	0/0:17,0:11:22.53:0,23,974	0/0:8,0:8:9.92:0,10,449	1/1:8,0:15:2.99:24,3,0	1/1:12,0:12:5.99:398,6,0	0/1:30,0:30:99:132,0,354	1/1:6,0:6:9.03:779,9,0	1/1:12,0:14:42.10:2221,42,0	0/0:9,0:13:0.47:0,0,1	0/0:8,0:8:18.06:0,18,1000	0/0:3,0:3:9.03:0,9,449	0/0:14,0:14:36.12:0,36,1768	1/1:2,1:12:3.01:336,3,0	0/0:10,0:10:30.10:0,30,1581	0/0:5,0:5:15.05:0,15,817	0/0:3,0:3:3.01:0,3,168	1/1:7,0:5:6.02:465,6,0	0/1:15,0:16:0:0,0,0	1/1:15,0:14:8.99:74,9,0	0/0:4,0:4:9:0,9,348	0/0:4,0:4:10.59:0,11,423	0/0:6,0:6:6.02:0,6,323	0/1:10,5:26:18.73:560,0,19	1/1:13,0:20:45.14:2265,45,0	1/1:9,0:9:15.04:469,15,0	1/1:3,2:13:3.01:342,3,0
chr10	55387228	.	GA	G	1479.11	PASS	AB=0.984;AC=34;AF=0.607;AN=56;BaseQRankSum=13.339;DP=602;FS=5.184;HRun=1;HaplotypeScore=109.1759;InbreedingCoeff=0.0272;MQ=86.89;MQ0=0;MQRankSum=-5.215;QD=3.10;ReadPosRankSum=7.777;VQSLOD=-0.1952;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:47,0:47:10.25:130,0,10	1/1:13,0:13:27.40:93,27,0	0/0:23,0:24:61.50:0,61,822	0/0:25,0:25:53.81:0,54,701	1/1:21,0:21:29.15:107,29,0	1/1:16,0:16:3.15:42,3,0	0/1:21,0:21:50.67:60,0,51	0/1:15,0:15:26.14:26,0,52	1/1:28,1:29:11.65:166,12,0	0/1:16,0:16:32.53:33,0,34	0/1:10,1:11:19.82:57,0,20	0/1:27,0:27:50.59:76,0,51	0/0:34,0:34:99:0,102,1533	0/0:22,0:22:66.16:0,66,1001	1/1:21,0:21:15.88:90,16,0	0/0:20,0:20:54.74:0,55,874	0/1:26,0:26:66.97:67,0,68	1/1:26,0:26:3.52:82,4,0	0/1:16,0:16:7.34:7,0,77	0/1:13,0:13:24.95:37,0,25	0/1:44,0:44:24.33:102,0,24	1/1:10,1:11:13.36:48,13,0	1/1:11,0:11:1.16:57,1,0	1/1:17,0:17:4.64:55,5,0	0/1:18,1:18:38.63:39,0,88	0/1:14,1:15:20.51:39,0,21	1/1:25,1:26:9.80:149,10,0	1/1:16,0:16:30.77:98,31,0
chr10	55387229	.	AC	A	11455.07	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=5.848;DP=600;FS=1.284;HRun=8;HaplotypeScore=76.8056;InbreedingCoeff=0.9986;MQ=88.13;MQ0=0;MQRankSum=-4.860;QD=24.22;ReadPosRankSum=2.142;VQSLOD=5.6836;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,42:46:99:1188,123,0	1/1:0,13:13:39.06:377,39,0	0/0:25,0:25:62.50:0,63,677	0/0:26,0:26:30.33:0,30,420	1/1:2,19:21:45.07:434,45,0	1/1:1,15:16:45.07:435,45,0	1/1:4,17:21:51.08:492,51,0	1/1:2,12:14:33.05:318,33,0	1/1:3,26:29:75.12:723,75,0	1/1:2,14:16:39.06:376,39,0	1/1:2,8:11:26.07:237,26,0	1/1:5,22:27:57.08:550,57,0	0/0:34,0:34:96.25:0,96,1133	0/0:22,0:22:63.18:0,63,749	1/1:0,20:20:60.10:579,60,0	0/0:19,1:20:28.20:0,28,623	1/1:5,21:26:60.09:579,60,0	1/1:2,24:26:72.12:695,72,0	1/1:4,12:16:36.05:347,36,0	1/1:2,11:13:30.05:290,30,0	1/1:4,40:44:99:1043,108,0	1/1:1,9:10:27.04:261,27,0	1/1:1,10:11:27.04:261,27,0	1/1:1,16:17:42.07:406,42,0	1/1:4,14:17:32.64:299,33,0	1/1:3,12:15:39.06:376,39,0	1/1:4,23:27:75.12:724,75,0	1/1:0,16:16:48.08:463,48,0
chr10	55388918	.	GCTATAGTCTTA	G	1154.03	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.533;DP=512;FS=2.200;HRun=0;HaplotypeScore=159.1083;InbreedingCoeff=0.9803;MQ=76.58;MQ0=1;MQRankSum=-1.406;QD=60.74;ReadPosRankSum=-3.616;VQSLOD=2.6103;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:60.21:0,60,3166	0/0:9,0:9:24.08:0,24,1376	0/0:8,0:8:15.05:0,15,804	0/0:15,0:15:33.08:0,33,1212	0/0:28,0:28:72.24:0,72,3352	0/0:14,0:14:39.13:0,39,2148	0/0:13,0:13:39.13:0,39,2148	1/1:4,15:19:45.15:1249,45,0	0/0:22,0:22:60.15:0,60,2892	0/0:27,0:27:72.25:0,72,3736	0/0:21,0:21:54.19:0,54,2956	0/0:12,0:12:33.11:0,33,1793	0/0:16,0:16:45.63:0,46,2452	0/0:12,0:12:36.12:0,36,1947	0/0:11,0:11:33.11:0,33,1827	0/0:15,0:15:36.12:0,36,2064	0/0:28,0:27:69.21:0,69,3665	0/0:17,0:17:48.16:0,48,2601	0/0:22,0:22:57.20:0,57,3153	0/0:24,0:23:60.68:0,61,3234	0/0:14,0:14:36.11:0,36,1810	0/0:11,0:11:30.10:0,30,1582	0/0:19,0:19:49.03:0,49,2427	0/0:14,0:14:30.10:0,30,1718	0/0:24,0:24:63.22:0,63,3450	0/0:23,0:23:54.17:0,54,2746	0/0:22,0:22:60.19:0,60,3024	0/0:25,0:25:72.25:0,72,4002
chr10	55388957	.	T	TTTTC	4180.75	PASS	AB=0.933;AC=26;AF=0.500;AN=52;BaseQRankSum=-10.051;DP=518;FS=6.864;HRun=0;HaplotypeScore=102.8328;InbreedingCoeff=0.5884;MQ=63.23;MQ0=5;MQRankSum=0.983;QD=15.48;ReadPosRankSum=-2.564;VQSLOD=2.3724;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:18.02:0,18,166	0/0:5,0:10:14.39:0,14,120	./.	./.	0/0:25,0:25:34.90:0,35,294	0/0:20,0:20:33.09:0,33,473	0/1:11,0:11:23.87:24,0,113	0/0:32,0:30:0:0,0,0	1/1:19,0:19:15.05:275,15,0	1/1:14,0:14:9.01:127,9,0	1/1:24,0:24:42.13:661,42,0	1/1:14,0:14:3.01:51,3,0	0/1:14,8:22:16.25:462,0,16	1/1:5,8:13:6.02:139,6,0	1/1:12,0:12:9.03:165,9,0	0/0:7,0:17:21:0,21,190	0/0:25,0:24:24.03:0,24,223	0/0:13,0:13:11.51:0,12,92	1/1:24,0:24:33.09:546,33,0	0/1:23,0:22:24.44:231,0,24	1/1:13,0:13:15.05:274,15,0	0/0:16,0:16:27.02:0,27,249	0/0:22,0:22:23.98:0,24,222	0/0:20,0:19:15.01:0,15,139	0/1:22,0:22:19.26:319,0,19	1/1:17,0:17:23.03:225,23,0	1/1:13,0:13:12.04:232,12,0	1/1:28,0:28:24.08:448,24,0
chr10	55388998	.	TTTC	T	3674.56	PASS	AB=0.837;AC=15;AF=0.268;AN=56;BaseQRankSum=-2.234;DP=538;FS=5.747;HRun=0;HaplotypeScore=94.3778;InbreedingCoeff=0.6527;MQ=64.63;MQ0=7;MQRankSum=-1.064;QD=19.55;ReadPosRankSum=4.034;VQSLOD=2.7682;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,28:31:0.38:286,0,0	0/1:8,0:8:19.17:19,0,90	0/0:11,0:10:24.54:0,25,289	0/0:5,0:4:8.89:0,9,108	1/1:1,24:25:66.22:1013,66,0	0/0:27,0:27:72.69:0,73,954	0/0:16,0:15:40.01:0,40,503	0/0:29,0:26:66.20:0,66,780	0/0:19,0:19:15.05:0,15,211	0/0:14,0:14:39.13:0,39,568	0/0:28,0:28:81.27:0,81,1278	0/0:18,0:18:9.02:0,9,141	0/0:17,0:17:45.15:0,45,683	0/0:14,0:13:21.07:0,21,283	0/0:17,0:17:12.04:0,12,162	0/1:16,0:16:33.47:33,0,180	0/1:1,25:26:8.98:382,0,9	1/1:1,16:17:12.04:204,12,0	0/0:27,0:25:47.49:0,47,958	0/0:22,0:21:59.23:0,59,893	0/0:14,0:14:18.05:0,18,235	1/1:1,20:21:50.31:783,50,0	1/1:0,21:21:40.92:656,41,0	1/1:3,20:22:18.06:297,18,0	0/0:13,0:13:21.07:0,21,298	0/0:23,0:23:63.21:0,63,1019	0/0:16,0:16:16.11:0,16,182	0/0:20,0:19:36.12:0,36,480
chr10	55389001	.	C	CTTTCTTTCT	1119.25	PASS	AB=0.994;AC=9;AF=0.161;AN=56;BaseQRankSum=0.435;DP=543;FS=1.905;HRun=0;HaplotypeScore=149.4484;InbreedingCoeff=-0.0572;MQ=65.88;MQ0=6;MQRankSum=2.537;QD=6.36;ReadPosRankSum=0.240;VQSLOD=2.6027;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:10.81:0,11,249	0/0:9,0:9:24.08:0,24,430	0/0:11,0:10:24.54:0,25,289	0/0:6,0:5:8.81:0,9,108	0/1:24,0:24:99:273,0,415	0/0:24,0:24:68.99:0,69,1260	0/0:16,0:15:39.12:0,39,556	0/0:27,0:25:61.42:0,61,713	0/0:20,0:20:9.72:0,10,28	0/0:14,0:14:8.11:0,8,258	0/0:27,0:27:51.92:0,52,583	1/1:2,19:23:3.01:142,3,0	0/1:17,0:17:18.88:19,0,295	0/0:15,0:14:5.42:0,5,187	0/0:17,0:17:5.59:0,6,16	0/0:17,0:17:42.12:0,42,694	0/1:27,0:27:19.15:19,0,377	0/0:17,0:16:11.53:0,12,162	0/0:27,0:25:5.11:0,5,300	0/0:22,0:21:46.68:0,47,500	0/0:13,0:13:10.11:0,10,29	0/1:20,0:20:99:274,0,295	0/1:21,0:21:99:207,0,332	0/1:20,0:20:23.53:24,0,186	0/0:12,0:12:9.99:0,10,108	0/1:23,0:23:99:297,0,276	0/0:19,0:19:2.18:0,2,10	0/0:20,0:19:17.02:0,17,72
chr10	55389002	.	T	TTTCC	7348.76	PASS	AB=1.000;AC=27;AF=0.482;AN=56;BaseQRankSum=-11.362;DP=556;FS=21.372;HRun=0;HaplotypeScore=93.3513;InbreedingCoeff=0.5718;MQ=66.12;MQ0=6;MQRankSum=3.551;QD=22.75;ReadPosRankSum=0.606;VQSLOD=2.5961;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:29.96:0,30,266	0/0:9,0:9:23.97:0,24,238	0/0:11,0:10:29.06:0,29,269	0/0:6,0:5:5.16:0,5,78	0/0:26,0:26:63.42:0,63,473	0/1:23,0:23:99:204,0,167	0/1:16,0:15:6.22:240,0,6	0/0:24,0:22:63.07:0,63,590	1/1:0,20:20:15.02:404,15,0	1/1:2,12:14:20.74:388,21,0	1/1:1,26:28:77.42:1130,77,0	0/1:23,0:23:23.73:24,0,43	0/1:17,0:17:99:259,0,194	0/1:15,0:14:63.33:63,0,132	1/1:1,17:18:9.03:242,9,0	0/0:17,0:17:42.04:0,42,421	0/0:27,0:27:29.54:0,30,272	0/0:17,0:16:15.01:0,15,139	1/1:2,25:28:80.93:1191,81,0	1/1:1,22:22:36.80:594,37,0	1/1:0,13:14:15.05:404,15,0	0/0:20,0:20:52.56:0,53,379	0/0:21,0:21:40.94:0,41,303	0/0:21,0:20:17.71:0,18,159	1/1:1,12:13:7.34:469,7,0	1/1:3,0:28:0.24:749,0,0	1/1:0,20:21:11.72:321,12,0	1/1:5,15:19:27.05:666,27,0
chr10	55389567	.	CCT	C	233.73	PASS	AB=0.941;AC=8;AF=0.154;AN=52;BaseQRankSum=0.122;DP=647;FS=0.000;HRun=0;HaplotypeScore=126.5383;InbreedingCoeff=0.3371;MQ=57.60;MQ0=8;MQRankSum=-0.760;QD=1.77;ReadPosRankSum=1.193;VQSLOD=2.3808;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:15.02:0,15,157	1/1:4,0:7:8.11:42,8,0	./.	./.	0/0:33,0:31:17.47:0,17,174	0/0:37,0:38:20.41:0,20,396	0/0:31,0:31:29.97:0,30,283	0/1:43,0:45:12.50:41,0,13	0/0:15,0:16:21:0,21,211	0/0:29,0:29:51.45:0,51,486	0/1:13,1:16:0.06:0,0,269	0/0:25,0:28:9.02:0,9,113	0/0:23,0:25:18.34:0,18,521	0/1:16,2:17:11.99:12,0,226	0/1:26,0:26:9.95:10,0,132	1/1:8,8:16:26.74:259,27,0	0/0:16,0:24:21.01:0,21,213	0/0:9,0:19:12.01:0,12,117	0/0:22,0:22:15.02:0,15,161	0/0:28,0:28:26.92:0,27,274	0/0:28,0:28:17.81:0,18,198	0/0:17,0:17:6.01:0,6,60	0/0:19,0:18:5.99:0,6,49	0/0:22,0:22:14.83:0,15,161	0/0:17,0:17:5.91:0,6,46	0/0:21,0:20:5.10:0,5,292	0/0:22,0:23:42.88:0,43,416	0/0:18,0:18:8.02:0,8,54
chr10	55389570	.	C	CTA	4041.29	PASS	AB=0.675;AC=15;AF=0.268;AN=56;BaseQRankSum=-2.698;DP=680;FS=1.304;HRun=0;HaplotypeScore=141.3765;InbreedingCoeff=-0.1494;MQ=56.87;MQ0=10;MQRankSum=3.838;QD=11.29;ReadPosRankSum=2.361;VQSLOD=3.1988;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:26:12.38:0,12,217	0/0:7,0:7:17.62:0,18,141	0/0:17,0:14:31.56:0,32,288	0/0:14,0:8:23.82:0,24,229	0/0:33,0:31:18.45:0,18,252	0/1:14,25:41:71.72:503,0,72	0/1:9,22:32:1.63:382,0,2	0/0:46,0:44:99:0,110,854	0/1:13,3:16:16.83:252,0,17	1/1:10,22:33:17.81:739,18,0	0/1:8,8:16:65.58:220,0,66	0/0:26,0:25:21.26:0,21,242	0/0:29,0:29:61.04:0,61,834	0/0:19,0:18:50.97:0,51,500	0/1:10,17:27:38.18:218,0,38	0/0:19,0:17:47.91:0,48,388	0/0:25,0:25:23.24:0,23,276	0/1:21,0:21:3.76:4,0,130	0/1:15,10:24:99:213,0,130	0/1:10,22:31:50.03:254,0,50	0/1:12,16:29:99:142,0,128	0/0:19,0:19:0.54:0,1,104	0/0:19,0:18:3.54:0,4,130	0/0:22,0:22:31.63:0,32,242	0/1:3,16:20:15.92:106,0,16	0/1:10,12:21:99:370,0,108	0/1:18,8:26:37.72:540,0,38	0/1:5,13:18:33.30:97,0,33
chr10	55389633	.	GTC	G	103.81	PASS	AB=0.938;AC=4;AF=0.074;AN=54;BaseQRankSum=2.330;DP=543;FS=1.783;HRun=0;HaplotypeScore=165.1590;InbreedingCoeff=0.2448;MQ=65.16;MQ0=10;MQRankSum=-2.280;QD=1.31;ReadPosRankSum=-2.152;VQSLOD=2.5620;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,1:28:52.34:0,52,1048	0/0:7,1:8:4.20:0,4,299	0/1:33,1:22:9.89:10,0,478	0/0:46,1:29:41.90:0,42,551	0/0:19,0:19:39.07:0,39,533	0/0:25,0:25:34.33:0,34,272	0/0:12,0:12:12.49:0,12,132	1/1:26,0:22:3.12:157,3,0	0/0:12,0:12:12.98:0,13,91	0/0:21,0:21:41.13:0,41,408	0/0:14,0:14:20.74:0,21,170	0/1:17,2:19:35.17:35,0,428	0/0:28,0:28:59.17:0,59,843	0/0:20,0:20:47.90:0,48,667	0/0:13,0:13:8.99:0,9,77	0/0:18,0:18:19.72:0,20,450	0/0:22,0:22:20.40:0,20,765	0/0:17,0:17:24.11:0,24,577	0/0:10,0:9:11.96:0,12,96	0/0:13,0:13:17.91:0,18,153	./.	0/0:16,0:16:5.83:0,6,484	0/0:15,0:15:27.05:0,27,369	0/0:15,0:15:25.96:0,26,398	0/0:16,0:16:27:0,27,238	0/0:19,0:18:36.53:0,37,311	0/0:27,0:27:38.39:0,38,298	0/0:18,0:18:35.85:0,36,280
chr10	55389649	.	C	CT	106.50	PASS	AB=0.857;AC=11;AF=0.196;AN=56;BaseQRankSum=9.562;DP=607;FS=5.601;HRun=1;HaplotypeScore=160.4810;InbreedingCoeff=-0.0249;MQ=69.93;MQ0=10;MQRankSum=-4.113;QD=0.59;ReadPosRankSum=2.415;VQSLOD=-0.6646;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:82.31:0,82,1079	0/0:11,0:11:28.64:0,29,361	0/0:51,0:36:61.36:0,61,914	0/0:58,0:33:40.83:0,41,782	0/0:18,0:18:47.91:0,48,646	0/1:16,7:23:47.64:48,0,79	0/1:11,2:13:1.05:1,0,47	0/0:36,0:32:48.42:0,48,279	0/1:13,3:16:25.18:25,0,89	0/1:19,0:19:5.58:6,0,167	0/0:11,3:14:10.48:0,10,79	0/0:19,0:19:51.05:0,51,641	0/0:21,0:21:62.50:0,62,800	0/0:19,0:19:53.97:0,54,721	1/1:9,2:11:5.81:32,6,0	0/0:18,0:18:50.98:0,51,648	0/0:28,0:28:66.11:0,66,852	0/0:23,0:23:57.17:0,57,755	0/0:15,0:14:33.27:0,33,157	0/1:14,3:17:1.78:2,0,67	0/0:7,0:7:5.56:0,6,26	0/0:18,0:18:47.28:0,47,584	0/0:19,0:19:46.97:0,47,619	0/0:20,0:20:48.08:0,48,603	0/1:12,6:18:35.57:36,0,71	0/1:16,2:17:43.15:43,0,121	0/1:22,4:26:34.71:35,0,160	0/1:18,3:20:16.50:17,0,128
chr10	55389650	.	C	CTCTCTCTCT	4940.94	PASS	AB=0.885;AC=14;AF=0.250;AN=56;BaseQRankSum=1.530;DP=609;FS=10.103;HRun=0;HaplotypeScore=221.8421;InbreedingCoeff=-0.1990;MQ=71.85;MQ0=10;MQRankSum=-2.633;QD=19.53;ReadPosRankSum=-1.630;VQSLOD=2.8692;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:86.95:0,87,2268	0/0:11,0:11:19.20:0,19,600	0/0:52,0:37:39.38:0,39,1034	0/0:60,0:35:34.81:0,35,944	0/0:18,0:18:47.35:0,47,1210	0/1:16,0:23:42.33:439,0,42	0/1:12,1:14:10.62:252,0,11	0/1:36,0:32:99:192,0,507	0/1:12,2:15:21.87:447,0,22	0/1:19,0:19:91.27:124,0,91	0/1:11,3:14:13.13:425,0,13	0/0:19,0:19:51.13:0,51,1120	0/0:20,0:21:63.14:0,63,1758	0/0:19,0:19:53.97:0,54,1489	0/1:10,1:12:1.40:235,0,1	0/0:18,0:18:50.96:0,51,1176	0/0:27,0:27:69.13:0,69,1675	0/0:22,0:23:54.23:0,54,1494	0/1:15,0:14:48.67:202,0,49	0/1:14,2:17:6.45:537,0,6	0/1:7,0:7:7.42:19,0,7	0/0:18,0:18:45.12:0,45,1021	0/0:19,0:19:51.12:0,51,1149	0/0:20,0:21:51.07:0,51,1125	0/1:12,6:18:24.16:756,0,24	0/1:15,1:16:91.41:394,0,91	0/1:21,2:25:99:518,0,122	0/1:18,1:20:75.76:400,0,76
chr10	55389906	.	TAGGTACATATCAC	T	10027.77	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=14.748;DP=664;FS=38.016;HRun=0;HaplotypeScore=242.8901;InbreedingCoeff=0.9757;MQ=86.35;MQ0=0;MQRankSum=-14.550;QD=63.07;ReadPosRankSum=1.645;VQSLOD=2.5930;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,33:35:66.23:2384,66,0	0/0:3,0:3:6.02:0,6,395	0/0:22,0:22:63.22:0,63,3607	0/0:29,0:29:72.25:0,72,3845	1/1:0,12:12:17.98:519,18,0	0/0:34,0:34:90.31:0,90,5932	0/0:21,0:21:60.21:0,60,3640	0/0:35,0:35:93.32:0,93,5079	0/0:33,0:33:99:0,99,6334	0/0:23,0:23:63.22:0,63,3704	0/0:19,0:19:54.18:0,54,3390	1/1:4,23:27:63.22:2486,63,0	0/0:20,0:20:60.21:0,60,3801	0/0:20,0:20:60.18:0,60,3189	0/0:26,0:26:75.26:0,75,4791	0/0:23,0:23:60.21:0,60,3767	1/1:6,14:20:30.06:1098,30,0	1/1:3,18:21:33.11:1298,33,0	0/0:25,0:25:72.22:0,72,4160	0/0:31,0:31:87.30:0,87,5353	0/0:44,0:44:99:0,129,8329	1/1:2,11:14:30.10:985,30,0	1/1:1,11:12:27.09:967,27,0	1/1:6,12:18:12:291,12,0	0/0:17,0:17:51.18:0,51,2928	0/0:26,0:26:75.26:0,75,4810	0/0:33,0:33:84.27:0,84,5106	0/0:21,0:21:63.22:0,63,4145
chr10	55392076	.	CATG	C	19896.01	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=9.610;DP=650;FS=6.457;HRun=0;HaplotypeScore=123.4013;InbreedingCoeff=0.9967;MQ=83.27;MQ0=0;MQRankSum=-8.057;QD=36.91;ReadPosRankSum=3.742;VQSLOD=5.8735;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,50:53:99:2072,129,0	1/1:0,6:6:18.06:289,18,0	0/0:22,0:22:66.21:0,66,1297	0/0:22,0:22:60.20:0,60,1230	1/1:2,15:17:33.11:529,33,0	1/1:2,25:27:63.21:1012,63,0	1/1:2,25:27:63.21:1012,63,0	1/1:4,29:31:81.28:1301,81,0	1/1:3,16:19:45.15:723,45,0	1/1:7,24:31:75.26:1202,75,0	1/1:1,11:12:30.10:481,30,0	1/1:1,25:26:72.25:1157,72,0	0/0:22,0:22:63.22:0,63,1364	0/0:21,0:21:54.19:0,54,1179	1/1:3,27:30:69.24:1108,69,0	0/0:24,0:24:66.23:0,66,1457	1/1:2,27:29:51.17:820,51,0	1/1:4,13:17:39.13:627,39,0	1/1:1,10:10:27.09:434,27,0	1/1:4,28:32:66.22:1060,66,0	1/1:2,24:26:57.15:888,57,0	1/1:3,20:23:42.14:675,42,0	1/1:2,22:24:54.16:867,54,0	1/1:1,26:27:63.21:1012,63,0	1/1:1,12:13:33.11:530,33,0	1/1:3,20:23:60.19:942,60,0	1/1:3,22:25:51.17:816,51,0	1/1:1,7:8:21.07:338,21,0
chr10	55395698	.	AT	A	7143.96	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=2.643;DP=566;FS=20.673;HRun=5;HaplotypeScore=107.5856;InbreedingCoeff=0.9855;MQ=73.18;MQ0=1;MQRankSum=-0.970;QD=24.13;ReadPosRankSum=0.193;VQSLOD=3.1748;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:74.89:0,75,679	0/0:3,0:3:7.06:0,7,25	0/0:29,0:21:39.40:0,39,394	0/0:28,0:18:23.11:0,23,245	0/0:25,0:25:63.08:0,63,620	1/1:2,18:20:38.28:441,38,0	1/1:2,18:21:56.19:611,56,0	1/1:30,0:30:62.01:289,62,0	1/1:2,15:20:45.01:437,45,0	1/1:1,25:26:71.88:756,72,0	1/1:1,16:18:50.25:517,50,0	0/0:18,0:18:48.07:0,48,466	0/0:18,0:18:48.13:0,48,600	0/0:14,0:15:42:0,42,533	1/1:4,11:16:37.97:392,38,0	0/0:15,0:15:38.15:0,38,567	0/0:25,0:25:56.96:0,57,527	0/0:11,0:11:32.95:0,33,281	1/1:4,23:27:70.53:776,71,0	1/1:3,17:21:41.58:432,42,0	1/1:0,10:11:27.08:304,27,0	0/0:12,0:12:33.04:0,33,318	0/0:24,0:24:60:0,60,563	0/0:19,0:19:51.01:0,51,475	1/1:6,15:21:47.88:504,48,0	1/1:1,27:28:74.93:779,75,0	1/1:2,27:30:57.67:736,58,0	1/1:2,5:7:15.04:169,15,0
chr10	55395701	.	T	TA	1887.42	PASS	AB=1.000;AC=26;AF=0.464;AN=56;BaseQRankSum=10.889;DP=571;FS=11.957;HRun=0;HaplotypeScore=128.5203;InbreedingCoeff=0.8123;MQ=77.51;MQ0=1;MQRankSum=1.650;QD=6.46;ReadPosRankSum=4.197;VQSLOD=2.8527;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:68.64:0,69,470	0/0:4,0:4:8.59:0,9,46	0/0:30,0:22:32.47:0,32,489	0/0:32,0:22:36.26:0,36,439	0/0:25,0:25:63.41:0,63,509	1/1:21,0:21:5.17:106,5,0	1/1:21,0:21:36.37:158,36,0	1/1:16,13:30:17.74:380,18,0	1/1:18,0:19:16.19:108,16,0	1/1:25,0:25:50.94:256,51,0	1/1:17,0:17:25.03:117,25,0	0/0:18,0:18:49.70:0,50,387	0/0:18,0:18:48.13:0,48,648	0/0:15,0:15:34.02:0,34,559	0/1:16,0:16:0.68:106,0,1	0/0:16,0:16:45.15:0,45,625	0/0:25,0:25:57.55:0,58,487	0/0:13,0:13:31.31:0,31,294	1/1:26,0:26:40.70:220,41,0	1/1:20,0:20:2:75,2,0	1/1:12,0:12:6.31:52,6,0	0/0:12,0:12:35.29:0,35,334	0/0:24,0:24:57.73:0,58,496	0/0:18,0:18:42.41:0,42,313	1/1:19,0:19:18.43:156,18,0	1/1:29,0:29:3.88:192,4,0	0/1:32,0:32:4.48:126,0,4	1/1:5,0:5:12.70:47,13,0
chr10	55395703	.	T	TA	7269.50	PASS	AB=1.000;AC=45;AF=0.804;AN=56;BaseQRankSum=1.061;DP=585;FS=0.000;HRun=10;HaplotypeScore=112.9250;InbreedingCoeff=0.8139;MQ=78.30;MQ0=1;MQRankSum=-1.599;QD=15.43;ReadPosRankSum=1.425;VQSLOD=4.5922;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,27:30:72.01:730,72,0	0/1:4,0:4:7.96:8,0,22	0/0:31,0:23:15.34:0,15,207	0/0:32,0:23:24.61:0,25,146	1/1:4,20:25:15.73:497,16,0	1/1:21,0:21:27.93:240,28,0	1/1:22,0:22:51.24:313,51,0	1/1:32,0:32:52.45:492,52,0	1/1:19,0:19:8.30:179,8,0	1/1:28,0:28:65.19:440,65,0	1/1:18,0:18:30.64:216,31,0	1/1:2,15:17:1.25:398,1,0	0/0:19,0:19:11.48:0,11,287	0/0:14,0:14:21.99:0,22,279	1/1:17,0:17:9.57:190,10,0	0/0:16,0:17:46.96:0,47,374	1/1:6,19:25:20.52:420,21,0	1/1:5,9:14:18.05:191,18,0	1/1:27,0:27:65.80:416,66,0	1/1:22,0:22:27.27:198,27,0	1/1:12,0:12:25.33:160,25,0	1/1:3,8:12:20.89:205,21,0	1/1:6,17:24:23.31:431,23,0	1/1:4,15:19:20.48:420,20,0	1/1:17,0:17:30.63:244,31,0	1/1:29,0:29:71:474,71,0	1/1:32,0:32:38.16:325,38,0	1/1:5,0:5:14.56:82,15,0
chr10	55395781	.	GCACACA	G	5852.10	PASS	AB=0.733;AC=46;AF=0.821;AN=56;BaseQRankSum=3.001;DP=587;FS=0.000;HRun=0;HaplotypeScore=183.6196;InbreedingCoeff=0.5100;MQ=55.91;MQ0=14;MQRankSum=-3.907;QD=11.92;ReadPosRankSum=1.404;VQSLOD=3.6104;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:37:17.51:203,18,0	0/1:3,0:5:15.68:16,0,65	0/0:28,0:9:3.01:0,3,38	0/0:36,0:18:3.01:0,3,37	1/1:18,0:29:6.43:36,6,0	1/1:12,2:17:1.34:211,1,0	1/1:13,12:25:8.21:94,8,0	1/1:15,5:20:16.40:239,16,0	1/1:13,3:18:21.45:373,21,0	1/1:19,5:25:30.08:529,30,0	1/1:8,3:13:5.79:63,6,0	1/1:10,0:19:1.29:198,1,0	0/0:14,0:16:36.12:0,36,873	0/0:12,0:16:20.23:0,20,450	1/1:10,4:16:21.07:374,21,0	1/1:9,9:20:23.90:434,24,0	1/1:13,0:19:14.88:220,15,0	0/1:18,0:24:0:313,0,0	1/1:19,2:20:18.03:323,18,0	1/1:16,4:23:22.79:341,23,0	1/1:28,0:26:20.70:296,21,0	1/1:12,0:20:9.70:75,10,0	1/1:13,0:14:9.78:76,10,0	1/1:14,0:20:4.53:45,5,0	1/1:13,5:16:21.02:331,21,0	1/1:28,5:35:36.05:578,36,0	1/1:6,7:13:18.06:363,18,0	1/1:4,6:10:5.40:122,5,0
chr10	55396479	.	A	AAG	1571.80	PASS	AB=0.977;AC=16;AF=0.286;AN=56;BaseQRankSum=12.434;DP=610;FS=24.273;HRun=0;HaplotypeScore=153.0526;InbreedingCoeff=-0.2544;MQ=51.03;MQ0=17;MQRankSum=-8.974;QD=4.31;ReadPosRankSum=-6.060;VQSLOD=-0.6029;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:25:36.12:0,36,547	0/0:7,0:7:12.04:0,12,183	0/0:32,0:7:20.83:0,21,248	0/0:24,0:7:18.01:0,18,200	0/1:43,0:42:99:101,0,1054	0/1:16,0:14:89.67:90,0,199	0/0:14,0:11:5.43:0,5,389	0/0:20,0:20:29.73:0,30,644	0/1:21,0:21:99:120,0,533	0/1:26,0:24:84.29:84,0,705	0/1:19,0:17:52.02:52,0,543	0/0:12,0:12:12.04:0,12,176	0/0:14,0:14:42.14:0,42,641	0/0:20,0:20:57.18:0,57,851	0/1:29,0:27:92.45:92,0,750	0/0:11,0:11:33.11:0,33,505	0/0:27,0:26:53.59:0,54,1120	0/1:14,1:13:99:147,0,201	0/1:27,0:26:99:145,0,612	0/1:42,0:41:99:130,0,1168	0/1:10,0:10:12.32:12,0,297	0/0:18,0:17:39.59:0,40,679	0/1:28,0:28:55.43:55,0,877	0/0:19,0:18:3.75:0,4,554	0/1:15,8:20:99:298,0,356	0/1:35,0:32:99:124,0,790	0/1:26,0:24:99:163,0,596	1/1:5,0:5:14.96:121,15,0
chr10	55396485	.	A	AAG	3128.41	PASS	AB=0.937;AC=20;AF=0.357;AN=56;BaseQRankSum=11.357;DP=631;FS=32.803;HRun=0;HaplotypeScore=158.9223;InbreedingCoeff=-0.3962;MQ=50.53;MQ0=15;MQRankSum=-10.018;QD=6.88;ReadPosRankSum=-4.630;VQSLOD=0.8700;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:27:33.04:0,33,471	0/0:7,0:7:12.04:0,12,171	0/0:30,0:8:21.06:0,21,291	0/0:21,0:7:14.04:0,14,210	0/1:29,14:42:99:566,0,946	0/1:16,0:14:99:111,0,157	0/1:14,0:11:6.22:6,0,380	0/1:23,2:25:99:189,0,670	0/1:20,1:21:99:157,0,445	0/1:25,0:23:99:105,0,613	0/1:23,0:21:99:146,0,535	0/0:17,0:17:10.85:0,11,142	0/0:13,0:13:39.12:0,39,578	0/0:21,0:21:60.20:0,60,917	0/1:30,0:28:99:103,0,685	0/0:13,0:13:39.12:0,39,575	0/0:26,0:25:56.81:0,57,1047	0/1:12,1:13:65.59:235,0,66	0/1:31,0:28:99:163,0,585	0/1:43,0:42:99:129,0,1050	0/1:10,0:10:10.68:11,0,283	0/1:15,2:16:62.58:63,0,537	0/1:21,7:28:99:293,0,790	0/1:18,2:19:69.26:69,0,464	0/1:15,8:20:99:300,0,330	0/1:38,0:35:99:207,0,756	0/1:25,1:24:99:202,0,506	1/1:8,1:9:23.91:240,24,0
chr10	55396492	.	A	AAAAGAAAGAAAGAAAG	15883.19	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=4.971;DP=645;FS=8.224;HRun=0;HaplotypeScore=264.0260;InbreedingCoeff=0.8328;MQ=49.01;MQ0=12;MQRankSum=-6.374;QD=28.31;ReadPosRankSum=0.271;VQSLOD=2.0782;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:11,17:35:6.02:270,6,0	1/1:7,0:7:3.01:42,3,0	0/0:24,0:8:9.02:0,9,100	0/0:16,0:5:2.99:0,3,23	1/1:23,0:44:83.09:1958,83,0	1/1:7,0:14:24.02:450,24,0	1/1:10,0:12:22.97:303,23,0	1/1:25,0:34:62.91:1059,63,0	1/1:11,0:21:36.88:669,37,0	1/1:17,0:25:40.10:620,40,0	1/1:15,0:22:44.91:728,45,0	1/1:2,14:17:3.01:228,3,0	0/0:12,0:12:30.08:0,30,1095	0/0:20,0:20:48.10:0,48,1302	1/1:20,0:27:40.32:661,40,0	0/0:12,0:12:24.08:0,24,917	1/1:24,0:25:30.77:392,31,0	1/1:4,0:14:24.08:570,24,0	1/1:18,0:33:72.46:1046,72,0	1/1:29,0:43:87.19:1117,87,0	1/1:8,0:10:11.84:148,12,0	1/1:9,0:10:14.97:341,15,0	1/1:17,0:25:65.49:1225,65,0	1/1:13,0:18:26.95:552,27,0	1/1:13,0:23:47.97:1051,48,0	1/1:22,0:36:51.66:943,52,0	1/1:14,0:25:51.49:915,51,0	1/1:0,0:13:24.08:596,24,0
chr10	55396513	.	A	AAAGAAAGG	2586.18	PASS	AB=1.000;AC=24;AF=0.429;AN=56;BaseQRankSum=12.191;DP=660;FS=7.274;HRun=0;HaplotypeScore=217.2247;InbreedingCoeff=-0.6290;MQ=46.58;MQ0=11;MQRankSum=-7.669;QD=4.49;ReadPosRankSum=6.492;VQSLOD=1.1420;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:37,0:36:99:141,0,235	1/1:0,8:9:5.93:149,6,0	0/0:17,0:10:21.37:0,21,325	0/0:16,0:5:7.89:0,8,101	0/1:47,0:46:99:486,0,286	0/1:19,0:17:47.47:47,0,141	0/1:17,0:14:29.97:30,0,160	0/1:36,0:35:99:164,0,375	0/1:22,0:22:91.20:91,0,114	0/1:27,0:25:67.02:67,0,218	0/1:23,0:21:99:103,0,124	0/1:17,0:17:66.76:67,0,107	0/0:13,0:13:39.08:0,39,845	0/0:24,0:24:69.13:0,69,1395	0/1:26,0:24:99:160,0,184	0/0:14,0:14:42.08:0,42,834	0/1:19,0:18:17.10:17,0,194	0/1:15,0:15:52.83:53,0,86	0/1:41,0:36:82.22:82,0,307	0/1:45,0:44:99:133,0,244	0/1:11,0:11:28.88:29,0,103	0/1:12,0:11:85.52:86,0,93	0/1:24,0:24:99:260,0,170	0/1:22,0:21:96.61:97,0,139	0/1:24,0:21:37.64:164,0,38	0/1:38,0:36:99:121,0,253	0/1:30,0:28:95.69:96,0,167	0/1:15,0:15:22.86:104,0,23
chr10	55398824	.	GT	G	383.25	PASS	AC=34;AF=1.000;AN=34;BaseQRankSum=-1.732;DP=101;FS=0.000;HRun=1;HaplotypeScore=28.9517;InbreedingCoeff=0.1617;MQ=24.13;MQ0=5;MQRankSum=-1.237;QD=4.67;ReadPosRankSum=0.530;VQSLOD=0.1538;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,7:2:2.04:6,2,0	1/1:0,1:1:2.37:8,2,0	./.	./.	1/1:0,8:8:1.96:6,2,0	1/1:0,4:4:8.15:24,8,0	./.	1/1:0,1:1:2.84:14,3,0	1/1:0,4:4:6.29:19,6,0	1/1:0,7:7:19.88:104,20,0	1/1:0,6:6:5.81:17,6,0	./.	1/1:0,3:1:1.55:4,2,0	1/1:0,6:3:3.85:11,4,0	1/1:0,3:2:4.44:14,4,0	1/1:0,4:3:6.75:22,7,0	./.	./.	1/1:0,4:3:7.94:44,8,0	./.	./.	./.	./.	./.	1/1:0,5:5:3.21:12,3,0	1/1:0,7:6:16.93:83,17,0	1/1:0,6:6:5.06:21,5,0	1/1:0,6:6:13.76:49,14,0
chr10	55398827	.	G	GA	853.62	PASS	AC=36;AF=1.000;AN=36;DP=109;FS=0.000;HRun=1;HaplotypeScore=27.9369;InbreedingCoeff=-0.0036;MQ=24.30;MQ0=5;QD=9.28;VQSLOD=1.0441;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,7:3:2.74:12,3,0	1/1:0,1:1:2.84:14,3,0	./.	./.	1/1:0,8:8:2.48:12,2,0	1/1:0,4:4:10.98:48,11,0	./.	1/1:1,1:2:5.98:60,6,0	1/1:0,4:4:8.29:37,8,0	1/1:1,7:8:23.77:176,24,0	1/1:1,6:7:8.28:58,8,0	1/1:2,2:2:3.01:34,3,0	1/1:0,3:1:2.60:10,3,0	1/1:0,6:3:5.42:23,5,0	1/1:0,3:2:5.60:26,6,0	1/1:0,4:3:8.50:44,8,0	./.	./.	1/1:1,4:4:11.75:110,12,0	./.	./.	./.	./.	./.	1/1:0,5:5:6.48:28,6,0	1/1:0,7:6:17.77:119,18,0	1/1:0,6:6:5.77:33,6,0	1/1:0,6:6:16.88:85,17,0
chr10	55400523	.	T	TA	71.63	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-3.693;DP=519;FS=6.675;HRun=10;HaplotypeScore=67.3302;InbreedingCoeff=0.8609;MQ=52.21;MQ0=36;MQRankSum=1.759;QD=8.95;ReadPosRankSum=1.198;VQSLOD=2.0935;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:32:83.70:0,84,672	1/1:2,6:7:15.04:160,15,0	0/0:8,0:6:14.01:0,14,103	0/0:5,0:3:8.95:0,9,68	0/0:24,0:23:47.77:0,48,393	0/0:24,0:23:59.92:0,60,489	0/0:16,0:15:32.87:0,33,261	0/0:43,0:29:68.59:0,69,539	0/0:18,0:18:35.88:0,36,288	0/0:19,0:19:50.91:0,51,414	0/0:20,0:20:44.94:0,45,369	0/0:16,0:14:29.95:0,30,246	0/0:17,0:17:31.91:0,32,252	0/0:19,0:18:32.87:0,33,263	0/0:17,0:16:35.92:0,36,289	0/0:20,0:19:38.76:0,39,304	0/0:26,0:24:59.92:0,60,489	0/0:18,0:16:37.98:0,38,301	0/0:20,1:16:12.80:0,13,296	0/0:19,0:19:44.85:0,45,363	0/0:14,0:14:38.95:0,39,318	0/0:10,0:10:29.94:0,30,242	0/0:17,0:16:29.93:0,30,244	0/0:7,0:6:14.97:0,15,121	0/0:19,0:19:47.94:0,48,394	0/0:22,0:21:50.70:0,51,403	0/0:24,0:22:50.73:0,51,399	0/0:7,0:6:14.98:0,15,123
chr10	55401349	.	ATG	A	6245.87	PASS	AB=0.723;AC=14;AF=0.250;AN=56;BaseQRankSum=6.182;DP=778;FS=4.845;HRun=0;HaplotypeScore=224.9634;InbreedingCoeff=-0.3334;MQ=54.53;MQ0=6;MQRankSum=-8.744;QD=15.69;ReadPosRankSum=2.145;VQSLOD=4.6565;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:92.80:0,93,1606	0/0:11,0:11:33.10:0,33,559	0/0:47,0:25:52.86:0,53,1007	0/0:45,0:20:38.16:0,38,602	0/0:19,0:19:48.16:0,48,863	0/1:17,15:32:99:640,0,335	0/1:22,12:35:99:421,0,576	0/1:23,13:36:99:512,0,731	0/1:16,17:33:99:513,0,461	0/1:23,13:36:99:650,0,550	0/1:7,11:18:99:456,0,206	0/0:25,0:25:72.25:0,72,1275	0/0:23,0:23:57.18:0,57,962	0/0:21,0:21:60.17:0,60,990	0/1:17,15:32:99:713,0,356	0/0:29,0:29:75.26:0,75,1321	0/0:30,0:30:60.72:0,61,1279	0/0:17,0:17:36.68:0,37,729	0/1:24,6:29:99:173,0,827	0/1:11,13:24:99:561,0,151	0/1:25,8:30:99:247,0,356	0/0:19,0:17:40.08:0,40,699	0/0:19,0:19:36.06:0,36,617	0/0:33,0:33:69.15:0,69,1178	0/1:19,7:26:99:250,0,440	0/1:17,16:33:99:576,0,497	0/1:11,12:23:99:434,0,374	0/1:6,1:7:78.55:99,0,79
chr10	55401368	.	ATGGTTTGTGTGTGTGTGTGTGTG	A	12211.43	PASS	AB=0.936;AC=15;AF=0.268;AN=56;BaseQRankSum=10.638;DP=725;FS=0.000;HRun=0;HaplotypeScore=430.7965;InbreedingCoeff=-0.3730;MQ=46.35;MQ0=25;MQRankSum=-12.923;QD=28.80;ReadPosRankSum=-1.079;VQSLOD=1.8896;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:33:42.45:0,42,2042	0/0:11,0:11:33.11:0,33,1810	0/1:50,0:7:2.55:3,0,95	0/0:51,0:8:7.41:0,7,124	0/0:14,0:13:27.96:0,28,915	0/1:33,1:33:99:1552,0,552	0/1:36,0:36:99:413,0,1341	0/1:38,0:35:99:211,0,535	0/1:27,3:29:99:1438,0,1789	0/1:25,3:26:99:1482,0,714	0/1:17,2:19:99:657,0,183	0/0:21,0:21:48.82:0,49,1779	0/0:20,0:20:57.20:0,57,3315	0/0:18,0:18:51.17:0,51,2776	0/1:25,3:28:99:1231,0,944	0/0:24,0:24:71.26:0,71,3732	0/0:25,0:26:78.27:0,78,3012	0/0:17,0:17:37.25:0,37,1797	0/1:20,0:20:99:438,0,112	0/1:18,1:20:99:854,0,140	0/1:39,0:35:99:335,0,1724	0/0:16,0:14:1.52:0,2,549	0/0:15,0:15:27.56:0,28,530	0/0:30,0:30:49.44:0,49,1391	0/1:24,1:25:99:1033,0,1364	0/1:27,2:28:99:1247,0,149	0/1:20,2:21:99:1143,0,1030	0/1:2,1:3:99:175,0,392
chr10	55401370	.	GGTT	G	2506.09	PASS	AB=0.881;AC=14;AF=0.250;AN=56;BaseQRankSum=13.620;DP=707;FS=15.326;HRun=0;HaplotypeScore=236.9383;InbreedingCoeff=-0.3492;MQ=46.57;MQ0=27;MQRankSum=-12.597;QD=7.48;ReadPosRankSum=-2.857;VQSLOD=1.0141;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,1:33:21.67:0,22,1111	0/0:11,0:11:33.11:0,33,764	0/0:49,0:5:14.71:0,15,218	0/0:55,0:8:0.18:0,0,234	0/0:14,0:13:12.83:0,13,381	0/1:25,9:33:99:285,0,421	0/1:30,2:32:91.24:91,0,946	0/0:32,0:30:47.59:0,48,1619	0/1:25,5:29:99:301,0,552	0/1:24,4:26:99:245,0,559	0/1:15,1:17:99:211,0,293	0/0:21,0:21:60.16:0,60,1091	0/0:20,0:20:57.18:0,57,1284	0/0:18,0:18:51.17:0,51,1154	0/1:20,5:25:99:284,0,480	0/0:24,0:25:73.32:0,73,1538	0/0:26,0:28:60.39:0,60,1226	0/0:16,0:16:31.28:0,31,833	0/1:14,2:16:72.23:72,0,541	0/1:14,3:19:99:193,0,256	0/1:37,3:34:99:172,0,873	0/1:17,1:17:59.09:59,0,397	0/0:15,0:15:27.05:0,27,521	0/0:28,0:29:19.53:0,20,864	0/1:16,8:25:99:350,0,514	0/1:22,4:24:99:205,0,713	0/1:17,4:21:99:183,0,463	0/1:3,0:3:9.57:10,0,113
chr10	55401415	.	TTGTG	T	3163.08	PASS	AB=0.858;AC=29;AF=0.537;AN=54;BaseQRankSum=1.534;DP=776;FS=12.650;HRun=0;HaplotypeScore=209.2469;InbreedingCoeff=0.5700;MQ=43.33;MQ0=70;MQRankSum=-1.874;QD=7.70;ReadPosRankSum=2.460;VQSLOD=1.7574;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:31:27.09:0,27,561	0/0:8,0:10:14.52:0,15,207	./.	0/0:77,0:13:3.01:0,3,43	0/0:19,0:19:17.68:0,18,239	1/1:18,4:24:5.37:223,5,0	1/1:25,2:27:18.06:271,18,0	0/0:45,0:37:11.68:0,12,48	0/1:22,10:32:2.87:209,0,3	1/1:27,5:27:30.08:419,30,0	1/1:11,4:17:18.05:260,18,0	0/0:12,0:17:29.30:0,29,403	0/1:20,1:22:1.90:2,0,614	0/1:19,0:19:19.57:20,0,405	1/1:16,7:24:21.02:283,21,0	0/0:22,0:21:24.42:0,24,413	1/1:15,0:24:5.96:56,6,0	0/1:13,0:18:19:19,0,39	1/1:18,2:12:6.02:95,6,0	1/1:12,3:15:10.28:145,10,0	1/1:51,5:48:26.15:401,26,0	0/0:24,0:26:34.84:0,35,433	0/0:14,0:13:15.02:0,15,208	0/0:30,0:29:18.53:0,19,352	0/1:21,4:24:12.56:174,0,13	1/1:20,7:22:27.04:401,27,0	1/1:14,7:21:21.02:331,21,0	1/1:5,0:5:3.01:47,3,0
chr10	55402103	.	TC	T	1493.85	PASS	AB=0.994;AC=31;AF=0.554;AN=56;BaseQRankSum=8.247;DP=441;FS=112.985;HRun=1;HaplotypeScore=119.0314;InbreedingCoeff=-0.0669;MQ=50.49;MQ0=24;MQRankSum=-8.616;QD=4.93;ReadPosRankSum=-1.017;VQSLOD=-0.2476;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,1:10:25.59:172,26,0	0/1:4,0:4:6.66:7,0,17	0/0:40,0:11:4.94:0,5,86	0/0:54,0:15:18.04:0,18,159	1/1:12,1:11:21.71:118,22,0	0/0:13,0:10:6.43:0,6,132	0/1:12,0:12:12.11:12,0,68	0/1:22,0:20:99:101,0,133	0/1:15,0:15:15.98:16,0,135	0/1:24,0:24:3.88:4,0,208	0/1:18,0:18:25.48:25,0,143	1/1:7,1:8:17.72:123,18,0	0/1:10,0:10:30.96:31,0,55	0/1:3,0:3:4.03:4,0,33	0/1:18,0:18:63.75:64,0,78	0/1:10,1:11:56.17:61,0,56	1/1:11,1:12:31.79:207,32,0	1/1:6,1:5:14.89:109,15,0	0/0:23,0:19:27.16:0,27,313	0/1:13,0:13:23.85:24,0,60	0/0:7,0:7:8.10:0,8,62	1/1:8,1:9:23.09:158,23,0	1/1:19,1:19:42.25:230,42,0	1/1:11,0:9:14.42:84,14,0	0/1:18,0:17:34.28:34,0,56	0/1:14,0:14:17.15:17,0,112	0/1:23,0:22:36.38:36,0,233	0/1:7,0:7:35.55:36,0,52
chr10	55402113	.	T	TGGGC	776	PASS	AB=0.915;AC=13;AF=0.232;AN=56;BaseQRankSum=8.787;DP=518;FS=50.258;HRun=0;HaplotypeScore=231.2405;InbreedingCoeff=-0.2838;MQ=33.66;MQ0=46;MQRankSum=-1.058;QD=2.78;ReadPosRankSum=7.503;VQSLOD=1.0046;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:9:22.33:0,22,238	0/0:5,0:5:12.50:0,12,189	0/0:51,0:6:15.92:0,16,225	0/1:56,0:12:1.12:1,0,213	0/0:28,0:27:29.02:0,29,392	0/1:16,0:13:28.40:28,0,474	0/1:15,1:16:1.99:2,0,457	0/0:21,0:20:48.01:0,48,763	0/0:11,0:11:33.11:0,33,650	0/1:25,4:27:99:185,0,684	0/1:18,4:22:68.33:68,0,646	0/1:9,0:9:6.93:7,0,163	0/0:12,0:12:7.47:0,7,472	0/0:5,0:4:10.53:0,11,143	0/0:18,0:18:51.17:0,51,900	0/0:11,0:11:33.11:0,33,637	0/0:9,0:10:4.01:0,4,160	0/0:9,0:6:10.83:0,11,39	0/0:26,0:21:60.15:0,60,1032	0/1:12,4:16:99:164,0,354	0/0:8,0:8:17.42:0,17,268	0/1:17,0:17:39.12:56,0,39	0/1:13,6:19:99:173,0,148	0/1:14,0:13:24.05:24,0,125	0/1:18,4:21:99:178,0,650	0/1:19,0:19:2.76:3,0,727	0/1:20,1:20:26.46:26,0,629	0/0:13,0:7:15.05:0,15,284
chr10	55402133	.	GCCT	G	1503.13	PASS	AB=0.931;AC=34;AF=0.607;AN=56;BaseQRankSum=2.148;DP=359;FS=2.146;HRun=0;HaplotypeScore=139.8196;InbreedingCoeff=-0.1805;MQ=29.72;MQ0=35;MQRankSum=0.176;QD=5.20;ReadPosRankSum=0.201;VQSLOD=2.8088;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:8,0:8:5.46:31,0,5	0/0:2,0:2:1.04:0,1,4	0/0:31,0:3:5.63:0,6,39	0/0:32,0:6:11.25:0,11,122	0/1:8,3:17:12.47:104,0,12	1/1:13,0:11:1.54:95,2,0	1/1:11,0:11:0.31:47,0,0	0/1:11,0:13:9.28:9,0,186	0/1:6,0:6:18.24:18,0,68	0/1:16,0:14:2.54:3,0,20	0/1:16,0:16:32.78:99,0,33	0/1:5,0:5:18.43:18,0,22	0/1:9,0:9:33.84:34,0,137	0/1:3,0:2:14.75:15,0,42	1/1:11,0:11:2.81:36,3,0	0/1:6,0:6:28.17:28,0,74	0/1:6,2:8:18.09:104,0,18	0/1:5,1:4:1.04:33,0,1	0/1:18,1:17:52.51:105,0,53	1/1:11,0:11:0.99:47,1,0	0/0:5,0:5:3.50:0,4,21	1/1:12,2:25:27.86:181,28,0	1/1:11,3:15:26.13:221,26,0	1/1:10,2:11:17.80:135,18,0	1/1:12,0:13:1.25:91,1,0	1/1:10,1:12:24.06:116,24,0	0/1:16,0:15:40.72:41,0,130	1/1:11,3:8:8.73:45,9,0
chr10	55402137	.	T	TG	584.50	PASS	AB=0.972;AC=35;AF=0.625;AN=56;BaseQRankSum=6.578;DP=323;FS=24.754;HRun=0;HaplotypeScore=134.4474;InbreedingCoeff=0.1063;MQ=30.17;MQ0=28;MQRankSum=1.245;QD=2.15;ReadPosRankSum=4.110;VQSLOD=0.8020;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:8,0:8:6.60:7,0,24	1/1:2,0:2:4.41:14,4,0	0/0:26,0:3:5.74:0,6,37	0/1:28,0:5:1.85:2,0,17	1/1:16,1:17:4.68:79,5,0	1/1:9,1:10:20.31:92,20,0	1/1:10,0:10:14.72:54,15,0	0/0:14,0:13:37.46:0,37,362	0/0:6,0:6:1.27:0,1,70	0/1:14,0:12:23.37:26,0,23	0/1:13,0:13:12.74:13,0,38	0/1:5,0:5:2.58:3,0,16	0/1:7,1:8:15.56:16,0,111	0/1:3,0:2:2.12:2,0,26	1/1:10,0:10:17.67:58,18,0	0/0:5,0:5:11.90:0,12,102	0/1:8,0:8:0.20:0,0,43	0/1:5,0:4:5.59:6,0,26	0/1:13,2:14:19.71:20,0,119	1/1:10,1:11:16.40:69,16,0	0/1:5,0:5:2.45:2,0,23	1/1:23,2:25:17.81:90,18,0	1/1:15,0:15:10.63:41,11,0	0/1:12,0:11:9.17:9,0,13	1/1:13,0:12:7.43:32,7,0	1/1:8,2:10:12.02:60,12,0	0/1:11,2:13:42.43:42,0,109	1/1:12,0:6:3.19:14,3,0
chr10	55403540	.	AG	A	8108.70	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=5.792;DP=677;FS=1.353;HRun=1;HaplotypeScore=111.6614;InbreedingCoeff=0.9999;MQ=82.97;MQ0=0;MQRankSum=-1.796;QD=38.43;ReadPosRankSum=2.729;VQSLOD=4.8454;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,29:29:75.25:1049,75,0	0/0:15,0:15:45.15:0,45,719	0/0:22,0:22:66.22:0,66,1047	0/0:17,0:17:51.10:0,51,753	1/1:0,20:20:60.11:795,60,0	0/0:22,0:22:66.23:0,66,1055	0/0:28,0:28:84.26:0,84,1296	0/0:27,0:26:81.28:0,81,1296	0/0:25,0:25:72.23:0,72,1127	0/0:31,0:31:93.31:0,93,1468	0/0:17,0:17:51.17:0,51,815	1/1:0,16:16:45.15:629,45,0	0/0:25,0:25:75.26:0,75,1197	0/0:22,0:22:66.23:0,66,1055	0/0:23,0:23:66.23:0,66,1055	0/0:20,0:20:60.20:0,60,959	1/1:0,44:44:99:1676,120,0	1/1:0,18:18:48.16:666,48,0	0/0:15,0:15:45.14:0,45,696	0/0:29,0:29:75.26:0,75,1199	0/0:47,0:47:99:0,141,2250	1/1:0,34:34:93.31:1301,93,0	1/1:0,27:27:78.22:1068,78,0	1/1:0,23:23:66.22:923,66,0	0/0:15,0:15:39.12:0,39,601	0/0:33,0:33:99:0,99,1583	0/0:23,0:23:66.21:0,66,1027	0/0:10,0:10:30.10:0,30,480
chr10	55403601	.	C	CT	15007.62	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-3.026;DP=674;FS=0.286;HRun=3;HaplotypeScore=116.1202;InbreedingCoeff=0.9989;MQ=76.44;MQ0=0;MQRankSum=-3.545;QD=43.25;ReadPosRankSum=0.575;VQSLOD=3.5976;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,114,1589	0/0:6,0:6:18.06:0,18,252	0/0:25,0:24:62.41:0,62,804	0/0:24,0:24:56:0,56,696	0/0:27,0:27:78.25:0,78,1072	1/1:1,17:18:45.15:719,45,0	1/1:0,22:22:63.21:1007,63,0	1/1:2,22:24:66.22:1048,66,0	1/1:2,28:30:72.25:1151,72,0	1/1:0,24:24:72.20:1102,72,0	1/1:0,21:21:60.20:959,60,0	0/0:16,0:16:48.15:0,48,654	0/0:26,0:26:78.22:0,78,1044	0/0:22,0:22:66.22:0,66,918	1/1:1,29:30:81.03:1295,81,0	0/0:20,0:20:57.19:0,57,796	0/0:28,0:28:84.25:0,84,1154	0/0:17,0:17:48.13:0,48,635	1/1:2,24:25:72.25:1143,72,0	1/1:0,23:23:66.23:1055,66,0	1/1:2,34:37:99:1653,105,0	0/0:24,0:24:72.24:0,72,1000	0/0:35,0:35:83.48:0,83,1258	0/0:16,0:16:45.14:0,45,613	1/1:0,21:21:54.18:864,54,0	1/1:1,21:22:63.21:997,63,0	1/1:0,31:31:72.03:1151,72,0	1/1:0,18:18:54.18:863,54,0
chr10	55405046	.	C	CTTTTCT	3555.98	PASS	AB=1.000;AC=27;AF=0.500;AN=54;BaseQRankSum=5.138;DP=414;FS=5.815;HRun=0;HaplotypeScore=85.0506;InbreedingCoeff=0.7637;MQ=50.46;MQ0=25;MQRankSum=-5.579;QD=18.42;ReadPosRankSum=0.815;VQSLOD=2.4838;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:18:47.21:0,47,632	./.	1/1:43,0:7:0.63:1,1,0	0/0:57,0:10:12.38:0,12,96	0/0:20,0:20:50.79:0,51,722	1/1:5,5:9:7.19:254,7,0	1/1:2,11:12:9.02:214,9,0	0/0:0,0:3:2.70:0,3,7	1/1:1,5:6:6.01:189,6,0	1/1:7,3:10:17.01:464,17,0	1/1:1,11:13:24:601,24,0	0/0:8,0:9:20.96:0,21,315	0/0:9,0:8:20.99:0,21,327	0/0:10,0:10:16.02:0,16,245	1/1:1,6:8:5.85:108,6,0	0/0:7,0:10:26.99:0,27,379	0/0:24,0:23:66.01:0,66,981	0/0:9,0:18:19.94:0,20,507	1/1:2,13:18:26.61:583,27,0	1/1:6,16:20:6.06:201,6,0	1/1:6,0:6:12.42:94,12,0	0/0:5,0:3:6.90:0,7,98	0/0:12,0:14:29.40:0,29,350	0/0:12,0:13:35.92:0,36,517	0/1:11,0:10:12.89:95,0,13	1/1:14,1:15:38.63:379,39,0	1/1:13,1:14:17.68:278,18,0	1/1:2,0:2:3.01:95,3,0
chr10	55405172	.	CTT	C	2433.41	PASS	AB=0.853;AC=30;AF=0.536;AN=56;BaseQRankSum=3.525;DP=357;FS=7.113;HRun=15;HaplotypeScore=55.2382;InbreedingCoeff=0.8007;MQ=67.70;MQ0=3;MQRankSum=-3.213;QD=13.67;ReadPosRankSum=4.485;VQSLOD=2.2936;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:17,1:18:8.40:0,8,293	1/1:0,2:2:6:53,6,0	0/0:18,0:8:9.83:0,10,41	0/1:14,0:9:2.69:3,0,68	0/0:22,0:24:70.40:0,70,770	1/1:4,14:18:35.91:317,36,0	1/1:4,12:17:35.15:285,35,0	1/1:7,10:17:25.84:219,26,0	1/1:0,5:5:15:132,15,0	1/1:4,9:14:20.81:229,21,0	0/1:7,5:12:2.91:146,0,3	0/0:5,0:5:12.02:0,12,134	0/0:10,0:10:27.01:0,27,274	0/0:4,0:5:8.50:0,8,73	1/1:0,6:6:18:159,18,0	0/0:10,0:12:35:0,35,372	0/0:24,0:28:66.88:0,67,722	0/0:20,1:23:32.94:0,33,592	1/1:6,4:11:11.61:91,12,0	1/1:1,11:12:26.91:238,27,0	1/1:5,4:9:5.17:52,5,0	0/0:3,0:4:5.50:0,5,37	0/0:13,1:14:5.68:0,6,322	0/0:14,0:17:50.02:0,50,507	1/1:2,10:12:17.97:158,18,0	1/1:3,11:16:35.34:287,35,0	1/1:1,4:6:14.71:117,15,0	1/1:0,6:6:18:159,18,0
chr10	55405292	.	C	CAAAAAAA	7553.59	PASS	AB=1.000;AC=30;AF=0.536;AN=56;BaseQRankSum=11.571;DP=491;FS=10.940;HRun=9;HaplotypeScore=128.6201;InbreedingCoeff=0.9125;MQ=66.19;MQ0=1;MQRankSum=-8.714;QD=30.58;ReadPosRankSum=-7.187;VQSLOD=-0.5019;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:59.98:0,60,1009	1/1:2,0:3:6:115,6,0	0/0:29,0:22:19.28:0,19,295	0/1:16,0:13:1.15:1,0,105	0/0:24,0:24:50.85:0,51,851	1/1:20,0:25:51.11:1003,51,0	1/1:22,2:24:54.32:816,54,0	1/1:26,0:25:49.20:549,49,0	1/1:16,0:16:42.04:753,42,0	1/1:9,0:9:13.68:151,14,0	1/1:9,2:11:18.78:406,19,0	0/0:8,0:8:21.02:0,21,367	0/0:20,0:20:48.04:0,48,919	0/0:20,0:20:57.09:0,57,1030	1/1:19,1:20:42.73:867,43,0	0/0:15,0:15:42.03:0,42,720	0/0:22,0:24:69.13:0,69,1167	0/0:19,0:20:50.97:0,51,807	1/1:16,0:14:29.31:375,29,0	1/1:14,1:15:28.81:486,29,0	1/1:11,0:11:20.88:313,21,0	0/0:12,0:12:36.12:0,36,675	0/0:17,0:17:23.01:0,23,564	0/0:32,0:32:78.14:0,78,1474	1/1:9,1:9:14.99:265,15,0	1/1:23,1:24:55.32:896,55,0	1/1:12,1:14:29.96:558,30,0	0/1:3,0:3:0:0,0,0
chr10	55405300	.	AAC	A	1042.50	PASS	AB=0.983;AC=19;AF=0.339;AN=56;BaseQRankSum=6.301;DP=483;FS=18.510;HRun=0;HaplotypeScore=88.3692;InbreedingCoeff=0.0909;MQ=62.05;MQ0=1;MQRankSum=-4.827;QD=4.92;ReadPosRankSum=-4.370;VQSLOD=-0.6311;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:75.17:0,75,1086	1/1:1,3:4:6.45:62,6,0	0/0:29,0:21:47.77:0,48,503	0/0:18,0:13:16.94:0,17,263	0/0:26,0:26:75.06:0,75,949	0/1:26,1:27:5.41:151,0,5	0/1:23,0:23:49.26:137,0,49	1/1:20,2:21:3.84:249,4,0	0/1:17,0:15:3.20:81,0,3	0/1:8,0:8:10.27:10,0,54	0/1:10,1:11:9.59:80,0,10	0/0:8,0:8:24.05:0,24,328	0/0:18,0:18:51.17:0,51,788	0/0:20,0:20:60.10:0,60,874	0/1:18,0:17:46.77:70,0,47	0/0:20,0:20:60.10:0,60,775	0/0:25,0:25:55.70:0,56,989	0/0:24,0:24:62.99:0,63,802	0/1:16,0:14:36.20:36,0,75	0/1:13,0:13:12.51:59,0,13	1/1:10,0:10:3.84:68,4,0	0/0:12,0:12:36.12:0,36,558	0/0:13,0:13:35.94:0,36,504	0/0:32,0:32:93.24:0,93,1337	0/1:7,0:6:11.72:46,0,12	0/1:21,0:21:32.27:106,0,32	0/1:12,1:13:37.24:39,0,37	1/1:2,0:2:2.84:14,3,0
chr10	55405301	.	AC	A	2459.67	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=10.874;DP=485;FS=18.774;HRun=1;HaplotypeScore=76.0082;InbreedingCoeff=0.8935;MQ=61.24;MQ0=1;MQRankSum=-8.337;QD=11.55;ReadPosRankSum=-3.412;VQSLOD=0.0096;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:75.16:0,75,839	1/1:4,0:4:8.80:58,9,0	0/0:28,0:20:38.12:0,38,416	0/0:18,0:13:15.29:0,15,224	0/0:26,0:26:75.03:0,75,773	1/1:23,3:26:43.84:359,44,0	1/1:22,2:24:34.88:333,35,0	1/1:22,0:21:48.68:303,49,0	1/1:14,3:15:32.78:270,33,0	1/1:7,0:7:4.21:31,4,0	1/1:12,0:12:18.42:147,18,0	0/0:8,0:8:24.04:0,24,262	0/0:20,0:20:54.11:0,54,629	0/0:20,0:20:60.08:0,60,680	1/1:16,2:17:31.73:233,32,0	0/0:20,0:20:60.08:0,60,634	0/0:25,0:25:50.68:0,51,742	0/0:24,0:24:62.68:0,63,627	1/1:14,1:13:8.14:106,8,0	1/1:14,0:14:23.91:127,24,0	1/1:9,1:10:18.63:117,19,0	0/0:12,0:12:36.11:0,36,427	0/0:13,0:13:32.69:0,33,369	0/0:33,0:33:96.19:0,96,1068	0/1:7,0:6:1.03:60,0,1	1/1:22,1:23:47.49:379,47,0	1/1:11,1:12:21.67:144,22,0	1/1:2,0:2:2.84:14,3,0
chr10	55405302	.	C	CA	2774.45	PASS	AB=0.643;AC=28;AF=0.500;AN=56;BaseQRankSum=6.869;DP=493;FS=2.566;HRun=9;HaplotypeScore=76.5723;InbreedingCoeff=0.7852;MQ=61.24;MQ0=1;MQRankSum=-6.401;QD=12.61;ReadPosRankSum=-3.963;VQSLOD=2.7300;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:66.10:0,66,635	1/1:3,0:4:1.79:12,2,0	0/0:28,0:20:28.72:0,29,295	0/0:18,0:13:5.54:0,6,155	0/0:25,0:25:66.10:0,66,636	1/1:11,13:25:25.25:303,25,0	1/1:16,8:24:25.94:328,26,0	1/1:8,1:22:20.03:118,20,0	1/1:10,7:15:10.31:198,10,0	0/1:4,4:8:4.66:116,0,5	0/1:5,8:13:0.60:139,0,1	0/0:8,0:8:21.03:0,21,203	0/0:20,0:20:54.07:0,54,516	0/0:20,0:20:54.08:0,54,521	1/1:8,10:17:14.85:299,15,0	0/0:21,0:21:54.08:0,54,521	0/0:26,0:26:65.88:0,66,624	0/0:24,0:24:47.43:0,47,441	1/1:8,8:14:23.82:289,24,0	1/1:4,10:14:9.29:212,9,0	1/1:4,7:11:14.48:170,14,0	0/0:12,0:12:36.06:0,36,347	0/0:13,0:13:29.96:0,30,278	0/0:33,0:33:90.12:0,90,861	1/1:5,2:6:11.21:95,11,0	1/1:8,18:26:37.83:512,38,0	1/1:6,6:12:1.14:157,1,0	1/1:0,2:2:3.01:35,3,0
chr10	55405654	.	AG	A	5507.83	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=17.827;DP=611;FS=4.154;HRun=5;HaplotypeScore=204.4236;InbreedingCoeff=0.9890;MQ=47.07;MQ0=14;MQRankSum=-16.492;QD=21.86;ReadPosRankSum=0.414;VQSLOD=2.5103;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,147,1940	1/1:2,6:7:18.05:204,18,0	0/0:26,0:10:27.09:0,27,364	0/0:18,0:12:33.11:0,33,449	0/0:33,0:32:93.31:0,93,1270	1/1:1,19:19:36.10:407,36,0	1/1:1,26:20:51.15:578,51,0	1/1:1,12:9:21.06:237,21,0	1/1:1,13:14:33.09:374,33,0	1/1:1,12:10:27.08:306,27,0	1/1:1,10:10:15.04:170,15,0	0/0:19,0:19:51.17:0,51,697	0/0:25,0:25:75.22:0,75,991	0/0:30,0:30:81.27:0,81,1097	1/1:0,17:17:43.32:464,43,0	0/0:24,0:24:66.22:0,66,902	0/0:32,0:32:93.24:0,93,1228	0/0:25,0:25:69.19:0,69,895	1/1:4,13:14:36.10:408,36,0	1/1:1,15:16:29:398,29,0	1/1:2,17:15:10.74:106,11,0	0/0:19,0:19:54.17:0,54,724	0/0:26,0:26:78.25:0,78,1050	0/0:29,0:29:78.26:0,78,1067	1/1:2,17:18:39.11:442,39,0	1/1:2,15:16:39.11:442,39,0	1/1:6,26:31:69.15:768,69,0	1/1:3,6:9:18.05:204,18,0
chr10	55405692	.	GT	G	6044.04	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=17.508;DP=521;FS=3.088;HRun=1;HaplotypeScore=190.8177;InbreedingCoeff=0.9844;MQ=49.41;MQ0=21;MQRankSum=-16.431;QD=38.01;ReadPosRankSum=0.038;VQSLOD=4.2782;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:59,0:59:99:0,172,2695	1/1:0,4:4:12.04:164,12,0	0/0:23,0:6:15.05:0,15,239	0/0:26,0:11:30.08:0,30,451	0/0:32,0:31:96.31:0,96,1508	1/1:0,12:12:36.12:488,36,0	1/1:0,17:16:45.15:612,45,0	1/1:0,8:6:18.06:245,18,0	1/1:0,12:12:36.12:492,36,0	1/1:0,10:10:27.09:371,27,0	1/1:0,8:8:21.07:273,21,0	0/0:24,0:24:72.23:0,72,1125	0/0:22,0:22:66.19:0,66,1006	0/0:25,0:25:75.25:0,75,1180	1/1:0,11:11:33.11:446,33,0	0/0:22,0:22:66.23:0,66,1055	0/0:29,0:29:64.18:0,64,1215	0/0:18,0:18:54.18:0,54,863	1/1:0,7:7:21.07:289,21,0	1/1:0,16:16:48.12:628,48,0	1/1:0,6:5:12.04:158,12,0	0/0:24,0:24:72.25:0,72,1151	0/0:31,0:31:93.32:0,93,1487	0/0:27,0:27:81.27:0,81,1275	1/1:0,13:13:39.13:524,39,0	1/1:0,9:9:24.08:331,24,0	1/1:3,18:21:63.17:815,63,0	1/1:0,5:5:15.05:208,15,0
chr10	55405699	.	G	GA	7035.17	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=18.341;DP=597;FS=1.080;HRun=2;HaplotypeScore=213.6124;InbreedingCoeff=0.9889;MQ=48.78;MQ0=20;MQRankSum=-16.992;QD=29.31;ReadPosRankSum=-3.295;VQSLOD=3.5134;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,144,1771	1/1:0,5:5:12.04:166,12,0	0/0:22,0:8:21.01:0,21,231	0/0:29,0:12:29.81:0,30,355	0/0:34,0:33:99:0,102,1263	1/1:0,17:17:48.08:622,48,0	1/1:2,17:18:39.13:532,39,0	1/1:4,10:12:21.07:288,21,0	1/1:2,19:21:42.04:518,42,0	1/1:2,17:19:51.17:709,51,0	1/1:0,13:13:27:310,27,0	0/0:26,0:26:75.22:0,75,915	0/0:21,0:21:60.19:0,60,743	0/0:27,0:27:78.25:0,78,966	1/1:1,15:16:36.04:451,36,0	0/0:19,0:19:57.18:0,57,707	0/0:29,0:29:66.24:0,66,916	0/0:19,0:19:57.12:0,57,676	1/1:1,14:14:36.12:492,36,0	1/1:4,16:20:44.99:534,45,0	1/1:2,5:6:11.83:109,12,0	0/0:23,0:23:69.20:0,69,842	0/0:31,0:31:90.28:0,90,1116	0/0:28,0:28:81.24:0,81,991	1/1:2,18:20:42.01:509,42,0	1/1:2,18:19:48.16:663,48,0	1/1:4,22:26:69.10:880,69,0	1/1:2,6:8:18.06:251,18,0
chr10	55407437	.	C	CAAATAAAT	1102.02	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=2.878;DP=605;FS=0.891;HRun=0;HaplotypeScore=160.1250;InbreedingCoeff=0.6997;MQ=61.09;MQ0=3;MQRankSum=-4.607;QD=13.28;ReadPosRankSum=-3.978;VQSLOD=1.1810;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:38,0:38:14.37:14,0,1729	1/1:5,4:9:9.03:307,9,0	0/0:18,0:11:6.02:0,6,122	0/0:17,0:12:8.37:0,8,212	0/0:30,0:30:69.23:0,69,1661	0/0:18,0:18:36.12:0,36,935	0/0:15,0:15:39.10:0,39,854	1/1:35,0:32:33.08:903,33,0	0/0:14,0:14:30.10:0,30,735	0/0:18,0:18:42.14:0,42,987	0/0:21,0:21:48.13:0,48,1035	0/0:16,0:16:39.11:0,39,827	0/0:22,0:22:45.14:0,45,1062	0/0:23,0:23:63.22:0,63,1545	0/0:19,0:19:39.13:0,39,962	0/0:24,0:24:57.18:0,57,1319	0/0:40,0:40:90.29:0,90,2211	0/0:30,0:29:56.98:0,57,1358	0/0:20,0:19:29.77:0,30,653	0/0:31,0:31:63.16:0,63,1418	0/0:11,0:11:24.07:0,24,569	0/0:10,0:10:24.07:0,24,520	0/0:21,0:21:48.14:0,48,1161	0/0:15,0:15:36.11:0,36,855	0/0:21,0:21:42.14:0,42,977	0/0:19,0:19:39.12:0,39,841	0/0:34,0:34:84.24:0,84,1954	0/0:15,0:15:39.13:0,39,991
chr10	55408186	.	C	CCA	3067.07	PASS	AB=1.000;AC=27;AF=0.482;AN=56;BaseQRankSum=11.334;DP=537;FS=104.118;HRun=0;HaplotypeScore=136.0160;InbreedingCoeff=0.8095;MQ=52.91;MQ0=16;MQRankSum=-5.006;QD=13.69;ReadPosRankSum=-4.523;VQSLOD=-0.0782;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:30:51.76:0,52,480	0/0:14,0:14:2.42:0,2,175	0/0:19,0:3:3.47:0,3,26	0/0:21,0:10:20.59:0,21,186	0/0:27,0:29:16.40:0,16,428	1/1:15,0:14:40.74:319,41,0	1/1:11,0:9:25.70:163,26,0	0/0:29,0:28:2.65:0,3,236	1/1:9,0:9:18.85:148,19,0	1/1:20,0:20:49.99:336,50,0	1/1:18,0:18:37.87:278,38,0	0/0:18,0:21:1.92:0,2,270	0/1:21,0:19:24.22:24,0,168	0/0:9,0:16:23.04:0,23,196	1/1:15,0:15:34.39:243,34,0	0/0:18,0:22:15.29:0,15,372	0/0:23,0:25:45.43:0,45,451	0/0:14,0:14:11.80:0,12,179	1/1:17,0:15:19.57:325,20,0	1/1:16,0:15:38.36:282,38,0	1/1:7,0:7:18.81:142,19,0	0/0:16,0:17:29.75:0,30,259	0/0:19,0:19:34.70:0,35,327	0/0:29,0:32:10.96:0,11,483	1/1:18,0:14:30.12:226,30,0	1/1:9,16:24:54.65:405,55,0	1/1:15,0:14:30.97:227,31,0	1/1:17,0:11:20.78:163,21,0
chr10	55408206	.	A	AC	1966.77	PASS	AB=0.938;AC=22;AF=0.393;AN=56;BaseQRankSum=-3.949;DP=548;FS=1.851;HRun=1;HaplotypeScore=75.9472;InbreedingCoeff=0.4343;MQ=69.73;MQ0=5;MQRankSum=-0.024;QD=8.13;ReadPosRankSum=-2.819;VQSLOD=-0.0466;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:55.95:0,56,428	1/1:1,1:12:2.67:87,3,0	0/0:31,0:14:12.25:0,12,173	0/0:21,0:11:17.65:0,18,102	0/0:28,0:29:65.45:0,65,492	0/1:13,0:12:38.71:100,0,39	1/1:13,0:11:14.08:196,14,0	1/1:6,1:38:30.38:396,30,0	0/1:6,0:6:9.47:40,0,9	0/1:18,0:18:55.43:132,0,55	1/1:10,0:10:12.57:143,13,0	0/0:23,0:22:44.38:0,44,362	0/0:19,0:18:41.43:0,41,290	0/0:17,0:17:29.90:0,30,241	0/0:7,10:17:2.94:0,3,18	0/0:19,0:20:28.04:0,28,379	0/0:27,0:27:65.36:0,65,532	0/0:16,0:16:38.66:0,39,282	1/1:10,16:24:1.58:267,2,0	0/1:10,15:24:71.41:108,0,71	0/1:8,0:8:3.51:79,0,4	0/0:16,0:16:46.65:0,47,342	0/0:17,0:16:38.65:0,39,305	0/0:27,0:28:59.78:0,60,436	1/1:18,0:14:2.96:128,3,0	1/1:25,0:24:5.93:238,6,0	1/1:20,0:20:1.82:198,2,0	0/1:9,0:6:3.42:36,0,3
chr10	55409100	.	C	CTGTCTG	10922.12	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=15.965;DP=833;FS=2.700;HRun=0;HaplotypeScore=240.0804;InbreedingCoeff=0.9005;MQ=51.30;MQ0=20;MQRankSum=-8.478;QD=31.30;ReadPosRankSum=-4.849;VQSLOD=3.5941;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:63,0:63:99:0,171,3827	1/1:9,3:12:14.25:231,14,0	0/0:44,0:20:43.33:0,43,682	0/0:100,0:36:42.09:0,42,706	0/0:20,0:20:51.16:0,51,1166	1/1:15,8:24:36.01:655,36,0	0/1:21,0:21:51.19:274,0,51	1/1:39,0:43:84.41:1407,84,0	1/1:20,7:27:30.03:580,30,0	1/1:25,5:31:84.09:1788,84,0	1/1:16,4:19:5.99:49,6,0	0/0:34,0:34:99:0,99,2177	0/0:31,0:31:80.45:0,80,1797	0/0:26,0:26:75.26:0,75,1832	1/1:14,2:16:27.01:385,27,0	0/0:31,0:31:93.28:0,93,2072	0/0:24,0:24:69.68:0,70,1575	0/0:23,0:23:63.18:0,63,1415	1/1:10,3:14:25.07:736,25,0	1/1:15,4:19:24.02:414,24,0	1/1:37,1:39:28.53:472,29,0	0/0:28,0:28:75.24:0,75,1636	0/0:14,0:14:39.10:0,39,829	0/0:44,0:44:99:0,129,2702	1/1:7,7:15:9.01:153,9,0	1/1:23,6:30:78.54:1732,79,0	1/1:18,11:29:72.07:1689,72,0	1/1:1,7:8:14.79:357,15,0
chr10	55409112	.	CTCTG	C	2664.36	PASS	AB=0.900;AC=18;AF=0.321;AN=56;BaseQRankSum=8.480;DP=842;FS=0.391;HRun=0;HaplotypeScore=231.4917;InbreedingCoeff=-0.0751;MQ=52.33;MQ0=24;MQRankSum=1.358;QD=7.66;ReadPosRankSum=-2.789;VQSLOD=2.4789;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:62,0:62:99:0,168,3613	1/1:10,2:12:0.58:87,1,0	0/0:55,0:21:43.48:0,43,622	0/0:88,0:31:40.89:0,41,682	0/0:19,0:19:45.06:0,45,775	0/1:25,0:25:99:180,0,163	1/1:22,3:25:10.60:358,11,0	0/1:41,0:40:99:260,0,417	0/1:22,5:27:99:195,0,147	0/1:25,5:30:99:410,0,268	1/1:20,3:22:4.49:70,4,0	0/0:35,0:35:99:0,99,2164	0/0:33,0:33:96.20:0,96,1927	0/0:29,0:29:78.20:0,78,1700	0/1:15,1:16:95.90:147,0,96	0/0:31,0:31:93.30:0,93,2158	0/0:26,0:25:69.09:0,69,1669	0/0:25,0:24:42.04:0,42,1247	0/1:11,3:14:90.92:151,0,91	0/1:14,2:16:60.61:139,0,61	0/1:36,4:40:99:197,0,112	0/0:28,0:28:75.22:0,75,1762	0/0:15,0:15:45.12:0,45,889	0/0:46,0:46:99:0,126,2803	0/1:15,2:17:39.59:40,0,113	0/1:25,3:28:99:327,0,371	0/1:25,3:28:99:229,0,306	0/1:4,1:5:40.36:40,0,68
chr10	55409116	.	G	GTC	5960.86	PASS	AB=0.617;AC=26;AF=0.464;AN=56;BaseQRankSum=11.529;DP=832;FS=0.000;HRun=0;HaplotypeScore=189.9715;InbreedingCoeff=0.6663;MQ=52.56;MQ0=22;MQRankSum=-5.946;QD=17.23;ReadPosRankSum=-5.414;VQSLOD=3.1996;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:62,0:62:99:0,129,1575	1/1:6,5:12:18.06:274,18,0	0/0:59,0:24:34.98:0,35,364	0/0:86,0:30:43.92:0,44,431	0/0:15,0:15:27.08:0,27,329	1/1:16,11:27:7.37:350,7,0	1/1:11,13:24:36.06:530,36,0	1/1:25,14:37:4.96:566,5,0	1/1:15,12:28:37.83:465,38,0	1/1:20,8:28:29.22:722,29,0	1/1:13,9:21:9.92:147,10,0	0/0:34,0:34:81.24:0,81,976	0/0:32,0:32:71.89:0,72,851	0/0:28,0:28:69.17:0,69,805	0/1:7,9:16:10.38:325,0,10	0/0:31,0:31:75.22:0,75,904	0/0:26,0:25:63.18:0,63,757	0/0:25,0:24:32.30:0,32,551	1/1:9,7:16:23.04:444,23,0	0/1:6,9:15:15.84:231,0,16	0/1:15,25:40:50.49:312,0,50	0/0:28,0:28:66.21:0,66,806	0/0:15,0:15:36.11:0,36,437	0/0:45,0:45:97.29:0,97,1355	0/1:5,12:17:13.37:207,0,13	1/1:17,12:29:11.49:667,11,0	1/1:20,8:28:16.81:648,17,0	1/1:3,2:5:6.48:72,6,0
chr10	55410183	.	AT	A	10386.16	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=19.041;DP=664;FS=0.598;HRun=2;HaplotypeScore=89.7377;InbreedingCoeff=1.0000;MQ=84.01;MQ0=0;MQRankSum=-2.491;QD=34.05;ReadPosRankSum=3.890;VQSLOD=5.0799;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:93.27:0,93,1331	0/0:13,0:13:39.12:0,39,564	0/0:20,0:20:47.47:0,47,702	0/0:20,0:20:59.47:0,59,737	0/0:36,0:36:99:0,105,1550	1/1:1,25:26:60.19:778,60,0	1/1:0,17:17:42.14:545,42,0	0/0:51,0:51:99:0,150,2163	1/1:1,19:20:48.16:622,48,0	1/1:1,22:23:66.18:825,66,0	1/1:0,28:28:78.17:990,78,0	0/0:23,0:23:66.22:0,66,982	0/0:19,0:19:57.19:0,57,853	0/0:21,0:21:63.21:0,63,943	1/1:0,21:21:57.19:739,57,0	0/0:19,0:19:57.18:0,57,833	0/0:24,0:24:69.21:0,69,1008	0/0:19,0:19:54.14:0,54,775	1/1:0,27:27:81.26:1048,81,0	1/1:1,21:22:51.10:641,51,0	1/1:1,23:24:60.19:778,60,0	0/0:20,0:20:60.20:0,60,880	0/0:25,0:25:75.17:0,75,1095	0/0:18,0:18:51.17:0,51,761	1/1:0,27:27:66.21:856,66,0	1/1:2,18:20:57.18:736,57,0	1/1:0,37:37:99:1360,105,0	1/1:0,13:13:36.12:467,36,0
chr10	55411728	.	C	CG	11544.16	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=18.561;DP=597;FS=18.305;HRun=0;HaplotypeScore=106.3029;InbreedingCoeff=0.9996;MQ=77.26;MQ0=0;MQRankSum=-8.386;QD=45.63;ReadPosRankSum=3.445;VQSLOD=2.8147;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:39:99:0,114,1575	0/0:14,0:14:36.12:0,36,503	0/0:24,0:24:72.22:0,72,957	0/0:18,0:18:53.12:0,53,613	0/0:23,0:23:69.23:0,69,961	1/1:1,15:16:45.15:716,45,0	1/1:0,27:27:78.27:1230,78,0	0/0:33,0:33:96.28:0,96,1269	1/1:0,20:20:60.20:946,60,0	1/1:0,22:22:66.22:1047,66,0	1/1:1,8:9:27.09:428,27,0	0/0:22,0:22:66.20:0,66,905	0/0:27,0:27:81.27:0,81,1132	0/0:17,0:17:51.17:0,51,713	1/1:0,19:19:57.19:904,57,0	0/0:29,0:29:84.28:0,84,1175	0/0:31,0:30:93.28:0,93,1262	0/0:13,0:13:39.10:0,39,522	1/1:1,9:10:30.02:412,30,0	1/1:0,16:16:48.16:761,48,0	1/1:0,27:27:69.19:1080,69,0	0/0:11,0:11:33.11:0,33,461	0/0:21,0:21:57.18:0,57,777	0/0:21,0:21:60.18:0,60,821	1/1:1,17:18:48.16:763,48,0	1/1:0,28:28:84.28:1305,84,0	1/1:0,32:31:96.33:1523,96,0	1/1:0,9:9:27.09:430,27,0
chr10	55411767	.	C	CT	4561.27	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=15.224;DP=455;FS=1.807;HRun=2;HaplotypeScore=76.7632;InbreedingCoeff=0.9567;MQ=59.84;MQ0=3;MQRankSum=-13.087;QD=34.30;ReadPosRankSum=-1.912;VQSLOD=4.3512;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:81.24:0,81,990	0/0:16,0:16:48.15:0,48,594	0/0:11,0:4:9.03:0,9,110	0/0:12,0:9:23.52:0,24,231	0/0:27,0:27:78.24:0,78,966	1/1:2,7:8:18.02:236,18,0	1/1:1,8:9:21.03:279,21,0	0/0:24,0:24:63.18:0,63,761	1/1:2,10:12:33.09:455,33,0	1/1:4,8:12:30.09:400,30,0	1/1:1,4:5:12:149,12,0	0/0:24,0:24:72.21:0,72,879	0/0:25,0:25:75.24:0,75,929	0/0:17,0:17:48.13:0,48,581	1/1:0,14:14:39.13:560,39,0	0/0:24,0:24:66.21:0,66,818	0/0:38,0:38:99:0,114,1411	0/0:14,0:14:42.13:0,42,521	1/1:3,0:3:3.01:43,3,0	1/1:0,9:9:23.99:299,24,0	1/1:4,8:12:33.07:412,33,0	0/0:13,0:13:30.09:0,30,371	0/0:20,0:20:60.19:0,60,743	0/0:29,0:29:87.27:0,87,1078	1/1:2,8:10:24.04:321,24,0	1/1:3,11:14:39.10:524,39,0	1/1:2,18:20:57.03:711,57,0	1/1:0,4:4:12.04:173,12,0
chr10	55413439	.	AGTGTGTGTGTGTGT	A	363.67	PASS	AB=0.922;AC=7;AF=0.250;AN=28;BaseQRankSum=3.109;DP=522;FS=23.493;HRun=0;HaplotypeScore=183.2273;InbreedingCoeff=0.1941;MQ=66.31;MQ0=18;MQRankSum=-3.067;QD=4.18;ReadPosRankSum=-0.894;VQSLOD=0.6596;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	0/0:17,0:16:12.04:0,12,193	./.	./.	0/0:20,0:19:0:0,0,0	1/1:14,2:14:6.02:231,6,0	0/0:22,0:21:3.95:0,4,64	1/1:12,1:13:3.01:56,3,0	0/1:18,0:20:11.77:12,0,36	./.	0/0:18,0:18:9.03:0,9,398	./.	0/1:20,0:21:54.27:54,0,154	0/0:26,0:26:1.25:0,1,3	0/0:21,0:20:8.14:0,8,94	./.	./.	0/0:43,0:42:3.01:0,3,51	./.	0/0:17,0:16:12.04:0,12,188	0/0:15,0:16:2.98:0,3,22	./.	./.	0/1:15,1:15:3.47:110,0,3	./.
chr10	55413847	.	CTTT	C	3101.14	PASS	AB=0.645;AC=27;AF=0.482;AN=56;BaseQRankSum=-1.492;DP=531;FS=4.060;HRun=17;HaplotypeScore=87.4322;InbreedingCoeff=0.7234;MQ=70.23;MQ0=2;MQRankSum=-0.630;QD=12.26;ReadPosRankSum=3.360;VQSLOD=1.0669;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,1:24:10.06:0,10,293	0/0:1,0:5:5.48:0,5,28	0/0:36,0:17:22.57:0,23,274	0/0:23,0:9:12.24:0,12,120	0/0:17,1:24:17.34:0,17,370	1/1:9,15:26:38.58:360,39,0	0/1:11,7:22:12.83:204,0,13	0/0:17,0:31:56.68:0,57,534	1/1:4,14:18:32.88:339,33,0	1/1:4,15:20:38.49:364,38,0	1/1:1,4:5:8.87:92,9,0	0/1:4,1:11:9.87:10,0,115	0/0:10,0:13:24.06:0,24,362	0/0:23,0:28:50.53:0,51,667	1/1:7,10:19:35.67:343,36,0	0/0:9,0:19:38.42:0,38,342	0/0:13,0:23:44.19:0,44,351	0/0:4,0:13:22.53:0,23,143	1/1:9,10:20:22.29:329,22,0	1/1:6,13:19:29.64:304,30,0	1/1:5,6:13:7.27:76,7,0	0/0:10,0:23:38.49:0,38,264	0/0:13,0:16:37.22:0,37,346	0/1:4,0:8:17.55:18,0,58	1/1:2,10:13:20.84:202,21,0	1/1:12,17:32:32.59:375,33,0	1/1:14,5:23:33.70:268,34,0	1/1:1,2:3:2.98:31,3,0
chr10	55416046	.	CG	C	11264.53	PASS	AB=0.903;AC=55;AF=0.982;AN=56;BaseQRankSum=-1.707;DP=441;FS=3.553;HRun=3;HaplotypeScore=43.1294;InbreedingCoeff=0.5237;MQ=52.71;MQ0=9;MQRankSum=0.749;QD=25.54;ReadPosRankSum=0.541;VQSLOD=4.0842;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,29:29:69.19:927,69,0	1/1:0,8:8:12.04:163,12,0	1/1:23,0:3:0.47:1,0,0	0/1:25,3:3:0:0,0,1	1/1:0,20:20:24.08:301,24,0	1/1:0,14:14:27.09:372,27,0	1/1:0,17:17:42.14:587,42,0	1/1:0,13:13:36.06:450,36,0	1/1:0,16:16:36.12:497,36,0	1/1:0,11:11:33.07:438,33,0	1/1:0,12:12:21.07:269,21,0	1/1:0,14:14:36.12:490,36,0	1/1:0,11:11:24.08:329,24,0	1/1:0,13:12:27.09:371,27,0	1/1:0,22:22:51.17:682,51,0	1/1:0,10:10:30.10:418,30,0	1/1:0,29:29:57.15:769,57,0	1/1:0,23:23:48.16:663,48,0	1/1:2,12:12:36.12:498,36,0	1/1:0,17:17:32.98:360,33,0	1/1:1,15:15:27.09:365,27,0	1/1:0,8:8:18.06:227,18,0	1/1:0,8:8:15.05:203,15,0	1/1:0,20:20:39.94:584,40,0	1/1:0,8:8:9.03:119,9,0	1/1:0,9:9:24.05:311,24,0	1/1:0,21:21:54.18:743,54,0	1/1:0,7:7:9.03:126,9,0
chr10	55418755	.	GA	G	4222.25	PASS	AB=0.925;AC=34;AF=0.607;AN=56;BaseQRankSum=14.246;DP=583;FS=0.000;HRun=13;HaplotypeScore=82.2896;InbreedingCoeff=0.7551;MQ=61.27;MQ0=16;MQRankSum=0.169;QD=11.60;ReadPosRankSum=2.484;VQSLOD=4.7935;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,1:33:40.21:0,40,728	1/1:0,0:4:7.93:23,8,0	0/1:26,2:6:3.98:4,0,102	0/1:23,0:7:0.39:5,0,0	0/0:26,2:29:22.24:0,22,521	1/1:1,20:21:56.61:415,57,0	1/1:4,13:17:38.67:284,39,0	1/1:5,1:21:34:112,34,0	1/1:2,25:26:65.59:480,66,0	1/1:4,16:20:50.61:369,51,0	1/1:2,14:16:35.75:262,36,0	0/0:20,0:20:42.03:0,42,393	0/0:16,0:18:26.83:0,27,236	0/0:18,0:18:32.89:0,33,290	1/1:4,19:22:38.77:284,39,0	0/1:20,4:24:36.18:36,0,369	0/0:34,3:37:19.35:0,19,793	0/0:23,0:26:55.77:0,56,506	1/1:4,12:16:35.69:261,36,0	1/1:11,16:26:47.57:349,48,0	1/1:0,13:13:35.79:262,36,0	0/0:12,0:13:26.21:0,26,286	0/1:18,2:20:7.76:8,0,255	0/0:24,0:25:50.92:0,51,481	1/1:3,15:17:41.75:306,42,0	1/1:4,18:22:53.68:392,54,0	1/1:4,15:19:41.75:306,42,0	1/1:0,4:4:8.95:66,9,0
chr10	55419139	.	G	GA	3690.49	PASS	AB=0.700;AC=21;AF=0.375;AN=56;BaseQRankSum=-8.617;DP=607;FS=7.489;HRun=11;HaplotypeScore=69.2599;InbreedingCoeff=0.3784;MQ=59.46;MQ0=16;MQRankSum=0.499;QD=12.43;ReadPosRankSum=-1.159;VQSLOD=2.9113;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:43:97.19:0,97,710	0/1:7,0:8:3.88:4,0,102	0/0:9,0:3:8.95:0,9,68	0/0:19,0:10:4.45:0,4,94	0/0:21,1:22:25.43:0,25,378	1/1:4,9:15:29.73:272,30,0	0/1:8,18:27:5.24:349,0,5	0/0:30,0:30:56.95:0,57,443	0/1:9,7:16:65.81:125,0,66	1/1:9,12:21:31.12:318,31,0	0/1:7,6:14:0.79:143,0,1	0/0:24,1:25:32.28:0,32,430	0/1:14,2:16:0.74:1,0,175	0/0:8,0:8:20.88:0,21,160	1/1:6,14:19:12.84:312,13,0	0/0:12,0:12:17.18:0,17,138	0/0:32,0:32:74.65:0,75,573	0/0:41,0:44:99:0,110,805	0/1:8,16:25:35.93:351,0,36	1/1:9,19:28:12.25:369,12,0	0/1:6,21:27:18.60:375,0,19	0/0:16,1:17:5.39:0,5,225	0/0:24,0:24:47.77:0,48,367	0/0:21,0:21:46.87:0,47,364	1/1:1,8:10:14.19:176,14,0	0/1:8,18:26:6.60:473,0,7	1/1:9,16:27:5:343,5,0	0/1:9,7:15:7.46:79,0,7
chr10	55420465	.	TATATATATA	T	752.93	PASS	AB=1.000;AC=21;AF=0.618;AN=34;BaseQRankSum=1.214;DP=97;FS=5.170;HRun=0;HaplotypeScore=26.5821;InbreedingCoeff=0.2794;MQ=63.77;MQ0=12;MQRankSum=-2.220;QD=14.21;ReadPosRankSum=1.769;VQSLOD=0.5168;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:2,0:2:3.01:37,3,0	./.	0/0:7,0:3:3.95:0,4,50	0/0:26,0:3:3.90:0,4,39	./.	./.	./.	0/0:7,0:7:18.06:0,18,339	1/1:1,0:1:3.01:40,3,0	1/1:1,0:1:3.01:40,3,0	./.	1/1:0,3:3:3.01:98,3,0	0/0:1,0:1:3.01:0,3,38	./.	./.	1/1:3,0:3:6.02:153,6,0	1/1:14,1:10:6.02:135,6,0	1/1:20,0:16:18.06:221,18,0	./.	1/1:1,0:1:3.01:40,3,0	./.	./.	0/1:1,0:1:0:0,0,0	./.	0/0:3,0:3:4.26:0,4,84	0/1:2,0:2:32.43:34,0,32	1/1:1,0:1:3.01:40,3,0	0/1:2,0:2:31.19:34,0,31
chr10	55420467	.	TATATATA	T	1055.75	PASS	AB=1.000;AC=22;AF=0.688;AN=32;BaseQRankSum=1.521;DP=91;FS=11.243;HRun=0;HaplotypeScore=17.7133;InbreedingCoeff=0.2286;MQ=46.58;MQ0=12;MQRankSum=-1.359;QD=19.92;ReadPosRankSum=2.616;VQSLOD=0.3753;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,2:2:3.01:84,3,0	./.	0/0:5,0:1:3:0,3,29	0/0:25,0:2:3.01:0,3,37	./.	./.	./.	0/0:7,0:7:21.07:0,21,345	1/1:1,0:1:3.01:40,3,0	1/1:1,0:1:3.01:40,3,0	./.	1/1:3,0:3:3.01:63,3,0	0/0:1,0:1:3.01:0,3,38	./.	./.	1/1:3,0:3:6.02:125,6,0	1/1:5,9:10:6.02:147,6,0	1/1:5,15:15:18.06:502,18,0	./.	1/1:1,0:1:3.01:40,3,0	./.	./.	./.	./.	0/1:3,0:3:17.30:17,0,50	0/1:2,0:2:32.17:34,0,32	1/1:1,0:1:3.01:40,3,0	1/1:1,0:1:3.01:40,3,0
chr10	55420473	.	TA	T	727.69	PASS	AC=30;AF=0.789;AN=38;BaseQRankSum=1.646;DP=97;FS=13.851;HRun=1;HaplotypeScore=14.7461;InbreedingCoeff=0.3794;MQ=55.20;MQ0=11;MQRankSum=0.000;QD=12.33;ReadPosRankSum=2.137;VQSLOD=0.1193;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,0:2:2.98:21,3,0	./.	0/0:5,0:1:3:0,3,29	0/0:22,0:3:2.98:0,3,37	./.	1/1:0,1:1:3.01:40,3,0	./.	0/0:10,0:10:30.10:0,30,382	1/1:0,1:1:3.01:40,3,0	1/1:0,2:2:6.02:79,6,0	./.	1/1:3,0:3:2.98:21,3,0	0/0:1,0:1:3.01:0,3,38	./.	1/1:0,1:1:3.01:40,3,0	1/1:3,0:3:5.95:41,6,0	1/1:12,2:10:5.95:42,6,0	1/1:18,2:15:17.89:137,18,0	./.	1/1:0,3:3:9.03:120,9,0	./.	./.	1/1:0,1:1:3.01:40,3,0	./.	1/1:2,1:3:5.99:64,6,0	1/1:1,1:1:3.01:40,3,0	1/1:0,2:2:6.02:80,6,0	1/1:0,1:1:3.01:40,3,0
chr10	55421591	.	CTGTGGTCA	C	2570.72	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.909;DP=713;FS=5.473;HRun=0;HaplotypeScore=177.0461;InbreedingCoeff=0.9692;MQ=82.10;MQ0=0;MQRankSum=-7.005;QD=65.92;ReadPosRankSum=-3.640;VQSLOD=2.7882;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,151,6629	1/1:0,4:4:9.03:263,9,0	0/0:27,0:27:71.50:0,72,2781	0/0:28,0:28:78.27:0,78,2653	0/0:27,0:27:81.28:0,81,3406	0/0:22,0:22:63.20:0,63,2425	0/0:23,0:23:69.24:0,69,2951	1/1:5,30:35:90.29:2422,90,0	0/0:30,0:30:90.31:0,90,3998	0/0:23,0:23:63.22:0,63,2697	0/0:22,0:22:66.23:0,66,2787	0/0:28,0:28:84.27:0,84,3636	0/0:27,0:27:81.28:0,81,3657	0/0:24,0:24:72.25:0,72,3150	0/0:34,0:34:99:0,99,4258	0/0:26,0:26:75.26:0,75,3266	0/0:34,0:34:99:0,102,4331	0/0:18,0:18:51.17:0,51,2145	0/0:30,0:30:90.31:0,90,3571	0/0:20,0:20:60.21:0,60,2580	0/0:47,0:47:99:0,141,6218	0/0:16,0:16:45.15:0,45,1954	0/0:16,0:16:48.16:0,48,2175	0/0:15,0:15:45.14:0,45,1913	0/0:13,0:13:39.13:0,39,1737	0/0:28,0:28:84.29:0,84,3617	0/0:33,0:32:96.31:0,96,4206	0/0:12,0:12:36.12:0,36,1536
chr10	55421939	.	A	AAATTTTTCT	4251.62	PASS	AB=0.545;AC=3;AF=0.054;AN=56;BaseQRankSum=-2.303;DP=543;FS=7.628;HRun=0;HaplotypeScore=146.2888;InbreedingCoeff=0.6425;MQ=64.30;MQ0=0;MQRankSum=-7.336;QD=109.02;ReadPosRankSum=-3.118;VQSLOD=4.8520;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:90.48:0,90,2963	0/1:1,5:6:79.78:739,0,80	0/0:10,0:10:30.10:0,30,731	0/0:6,0:6:17.74:0,18,337	0/0:20,0:20:60.19:0,60,1745	0/0:22,0:22:63.22:0,63,1835	0/0:15,0:15:45.15:0,45,1426	1/1:13,13:33:93.31:3512,93,0	0/0:17,0:17:51.13:0,51,1483	0/0:22,0:22:66.23:0,66,1987	0/0:28,0:28:81.26:0,81,2424	0/0:17,0:17:51.16:0,51,1515	0/0:20,0:20:60.21:0,60,1864	0/0:11,0:11:27.08:0,27,774	0/0:18,0:18:54.19:0,54,1655	0/0:21,0:21:63.22:0,63,1877	0/0:25,0:25:69.23:0,69,2062	0/0:24,0:24:69.24:0,69,2047	0/0:19,0:19:51.15:0,51,1476	0/0:33,0:33:99:0,99,2991	0/0:13,0:13:33.11:0,33,1016	0/0:9,0:9:27.09:0,27,798	0/0:23,0:23:69.24:0,69,1917	0/0:13,0:13:39.13:0,39,1227	0/0:27,0:27:78.24:0,78,2391	0/0:17,0:17:51.17:0,51,1435	0/0:26,0:26:75.26:0,75,2429	0/0:14,0:14:42.14:0,42,1309
chr10	55422890	.	C	CTGCTGATGGTGG	13629.06	PASS	AB=0.519;AC=29;AF=0.518;AN=56;BaseQRankSum=-6.022;DP=779;FS=8.207;HRun=0;HaplotypeScore=263.9456;InbreedingCoeff=0.9593;MQ=54.57;MQ0=12;MQRankSum=-5.791;QD=32.92;ReadPosRankSum=-0.771;VQSLOD=2.6355;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,105,1592	1/1:11,0:11:23.92:206,24,0	0/0:32,0:20:47.19:0,47,546	0/0:41,0:25:53.73:0,54,511	0/0:18,0:18:35.49:0,35,470	1/1:32,0:31:80.86:1049,81,0	1/1:44,0:43:99:1897,111,0	1/1:33,0:31:67.97:636,68,0	0/1:2,22:28:0.87:91,0,1	1/1:31,0:28:81.19:1490,81,0	1/1:26,0:26:30.84:299,31,0	0/0:32,0:32:69.12:0,69,1544	0/0:27,0:27:74.05:0,74,1627	0/0:22,0:22:54.12:0,54,1287	1/1:37,0:37:92.97:1928,93,0	0/0:19,0:19:48.08:0,48,1073	0/0:33,0:32:74.09:0,74,1114	0/0:24,0:24:69.08:0,69,1689	1/1:25,0:23:62.51:869,63,0	1/1:25,0:25:58.54:792,59,0	1/1:38,0:37:56.96:867,57,0	0/0:23,0:23:63.48:0,63,934	0/0:17,0:16:36.01:0,36,588	0/0:35,0:35:29.19:0,29,1726	1/1:16,0:16:35.89:454,36,0	1/1:35,0:35:68.82:1359,69,0	1/1:24,0:24:59.89:1268,60,0	1/1:9,0:9:19.40:424,19,0
chr10	55422920	.	GTGA	G	3976.08	PASS	AB=0.969;AC=20;AF=0.370;AN=54;BaseQRankSum=1.517;DP=623;FS=2.204;HRun=0;HaplotypeScore=136.7943;InbreedingCoeff=0.7701;MQ=51.43;MQ0=12;MQRankSum=2.571;QD=16.64;ReadPosRankSum=6.111;VQSLOD=3.4954;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,19:24:25.35:498,25,0	./.	0/1:26,0:15:3.87:4,0,86	0/0:31,0:21:6.98:0,7,124	1/1:1,7:8:12.02:165,12,0	0/0:25,0:25:33.11:0,33,637	0/0:42,0:41:66.11:0,66,1076	0/0:31,0:20:21.79:0,22,162	0/0:15,0:15:3.01:0,3,59	0/0:24,0:23:33.05:0,33,532	0/0:15,1:16:18.06:0,18,352	1/1:7,14:21:24.08:329,24,0	0/0:19,0:19:8.96:0,9,655	0/0:17,1:18:0.97:0,1,667	0/0:31,0:31:39.06:0,39,692	1/1:6,13:19:24.08:329,24,0	1/1:5,25:30:45.15:618,45,0	1/1:9,17:26:45.15:617,45,0	0/0:15,0:14:15.05:0,15,275	0/0:19,0:18:23.78:0,24,473	0/0:44,0:41:39.70:0,40,793	1/1:5,12:17:33.11:452,33,0	1/1:2,10:12:24.08:329,24,0	1/1:12,28:39:45.15:618,45,0	0/1:14,1:15:16.85:17,0,335	0/0:26,0:25:54.03:0,54,915	0/0:17,0:17:27.09:0,27,484	0/0:7,0:7:12.04:0,12,237
chr10	55423066	.	GA	G	4849.55	PASS	AB=0.613;AC=38;AF=0.679;AN=56;BaseQRankSum=0.983;DP=555;FS=2.103;HRun=13;HaplotypeScore=66.5732;InbreedingCoeff=0.4845;MQ=63.99;MQ0=10;MQRankSum=-1.659;QD=10.71;ReadPosRankSum=4.497;VQSLOD=4.6107;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:11,22:32:43.10:368,0,43	0/0:11,0:11:30.01:0,30,279	0/0:11,0:9:21.86:0,22,151	0/0:18,0:12:4.12:0,4,85	1/1:4,16:20:44.74:328,45,0	0/1:5,15:19:8.47:258,0,8	1/1:5,7:11:17.89:131,18,0	0/0:26,2:25:10.05:0,10,393	1/1:5,10:13:23.85:175,24,0	1/1:9,15:23:41.69:304,42,0	0/1:9,15:25:21.04:252,0,21	1/1:7,10:17:21.75:155,22,0	0/0:17,1:18:11.14:0,11,265	0/0:14,0:14:39.05:0,39,374	1/1:8,17:26:20.54:301,21,0	1/1:5,13:18:9.57:233,10,0	1/1:7,0:30:32.33:94,32,0	1/1:8,0:24:24.31:70,24,0	1/1:3,9:12:26.84:196,27,0	1/1:7,13:20:20.51:263,21,0	1/1:2,3:5:5.95:44,6,0	1/1:5,10:16:27.52:218,28,0	0/1:9,15:25:30.62:256,0,31	0/1:9,15:24:10.71:258,0,11	1/1:8,15:24:44.02:327,44,0	0/1:11,11:21:0.47:204,0,0	1/1:9,17:25:15.55:276,16,0	1/1:2,9:11:19.93:137,20,0
chr10	55424615	.	AAAAAAG	A	5410.75	PASS	AB=1.000;AC=29;AF=0.537;AN=54;BaseQRankSum=10.419;DP=388;FS=3.366;HRun=0;HaplotypeScore=84.5153;InbreedingCoeff=0.8056;MQ=69.87;MQ0=4;MQRankSum=-9.402;QD=28.18;ReadPosRankSum=-0.152;VQSLOD=4.5426;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:60.20:0,60,1674	./.	0/0:27,0:12:2.87:0,3,15	0/1:23,0:10:12.05:12,0,67	0/0:25,0:25:54.60:0,55,1399	1/1:2,10:12:21.07:427,21,0	1/1:1,3:4:6.02:122,6,0	1/1:2,0:2:5.47:30,5,0	1/1:4,4:8:12.04:196,12,0	1/1:5,6:11:17.89:306,18,0	1/1:6,13:19:36.04:649,36,0	0/0:11,0:11:8.98:0,9,178	0/0:9,0:9:14.99:0,15,402	0/0:11,0:11:18.06:0,18,474	1/1:4,9:13:27.09:549,27,0	0/0:12,0:12:21.06:0,21,669	0/0:29,0:29:60.18:0,60,1735	0/0:24,0:23:42.13:0,42,1207	1/1:5,9:14:27.08:469,27,0	1/1:10,10:20:30.06:568,30,0	1/1:3,0:3:3.01:50,3,0	0/0:6,0:6:6.02:0,6,170	0/0:8,0:8:12.04:0,12,383	0/0:6,0:6:12.04:0,12,384	1/1:3,12:15:24.08:470,24,0	1/1:7,6:13:27.05:466,27,0	1/1:9,13:22:24.08:487,24,0	1/1:2,11:13:30.10:610,30,0
chr10	55424639	.	GA	G	397.62	PASS	AB=1.000;AC=3;AF=0.056;AN=54;BaseQRankSum=1.716;DP=364;FS=10.040;HRun=9;HaplotypeScore=67.7210;InbreedingCoeff=0.4727;MQ=62.90;MQ0=3;MQRankSum=-3.012;QD=10.46;ReadPosRankSum=-3.704;VQSLOD=0.9201;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:69.14:0,69,766	./.	0/1:18,0:5:2.17:2,0,47	0/0:24,0:8:8.74:0,9,85	0/0:21,0:21:42.08:0,42,470	0/0:15,0:15:13.21:0,13,111	0/0:6,0:6:6.96:0,7,71	1/1:1,19:20:54.02:491,54,0	0/0:4,0:4:6.93:0,7,51	0/0:14,0:14:22.78:0,23,224	0/0:15,0:15:13.74:0,14,114	0/0:4,0:4:9.03:0,9,103	0/0:11,0:11:27.08:0,27,309	0/0:7,0:7:15.04:0,15,173	0/0:9,0:9:4.24:0,4,10	0/0:9,0:9:27.04:0,27,297	0/0:30,0:30:78.23:0,78,899	0/0:21,0:21:60.15:0,60,679	0/0:21,0:21:21.09:0,21,403	0/0:14,0:14:16.28:0,16,148	0/0:1,0:1:0:0,0,0	0/0:2,0:2:3.01:0,3,35	0/0:5,0:5:15.04:0,15,173	0/0:7,0:7:21.06:0,21,242	0/0:13,0:13:6.24:0,6,26	0/0:12,0:12:20.83:0,21,199	0/0:17,0:17:14.14:0,14,144	0/0:17,0:17:19.72:0,20,170
chr10	55429184	.	T	TGC	415.46	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.140;DP=656;FS=1.183;HRun=0;HaplotypeScore=85.9472;InbreedingCoeff=0.9040;MQ=61.89;MQ0=8;MQRankSum=-2.851;QD=37.77;ReadPosRankSum=0.314;VQSLOD=5.1227;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:51:99:0,123,1557	1/1:2,9:11:30.10:510,30,0	0/0:41,0:24:53.19:0,53,633	0/0:40,0:25:62.95:0,63,711	0/0:21,0:21:54.12:0,54,694	0/0:20,0:20:45.08:0,45,557	0/0:20,0:20:51.10:0,51,630	0/0:31,0:29:70.16:0,70,942	0/0:16,0:16:38.99:0,39,433	0/0:14,0:14:39.10:0,39,495	0/0:12,0:12:33.08:0,33,428	0/0:30,0:30:78.02:0,78,1020	0/0:20,0:20:57.18:0,57,777	0/0:11,0:11:30.06:0,30,381	0/0:33,0:33:84.21:0,84,1103	0/0:16,0:16:39.03:0,39,439	0/0:28,0:28:78.18:0,78,1009	0/0:29,0:29:72.10:0,72,884	0/0:14,0:13:39.11:0,39,514	0/0:27,0:27:69.17:0,69,926	0/0:40,0:41:99:0,111,1366	0/0:18,0:18:51.14:0,51,672	0/0:16,0:16:47.80:0,48,557	0/0:33,0:33:93.14:0,93,1158	0/0:21,0:21:63.08:0,63,768	0/0:15,0:15:42.11:0,42,550	0/0:23,0:23:60.17:0,60,801	0/0:2,0:2:6.02:0,6,84
chr10	55429304	.	GA	G	655.63	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.455;DP=551;FS=3.565;HRun=8;HaplotypeScore=54.7435;InbreedingCoeff=0.9966;MQ=68.02;MQ0=0;MQRankSum=-3.787;QD=20.49;ReadPosRankSum=-3.460;VQSLOD=2.4094;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:72.20:0,72,856	1/1:2,7:9:24.02:225,24,0	0/0:14,0:14:26.95:0,27,273	0/0:10,0:9:23.70:0,24,248	0/0:22,0:22:65.23:0,65,767	0/0:20,0:20:57.16:0,57,669	0/0:20,0:20:60.17:0,60,713	1/1:4,19:23:57.09:552,57,0	0/0:15,0:15:39.12:0,39,471	0/0:24,0:24:63.19:0,63,750	0/0:18,0:18:48.14:0,48,564	0/0:19,0:19:39.24:0,39,601	0/0:15,0:15:45.13:0,45,532	0/0:16,0:16:45.13:0,45,532	0/0:21,0:21:57.13:0,57,663	0/0:12,0:12:33.10:0,33,399	0/0:23,0:23:63.18:0,63,751	0/0:16,0:16:45.14:0,45,544	0/0:18,0:18:45.13:0,45,532	0/0:38,0:38:99:0,108,1293	0/0:12,0:12:33.09:0,33,387	0/0:24,0:24:69.21:0,69,831	0/0:23,0:23:69.21:0,69,828	0/0:10,0:10:30.09:0,30,362	0/0:27,0:27:72.22:0,72,870	0/0:33,0:33:93.27:0,93,1112	0/0:25,0:25:72.22:0,72,867	0/0:19,0:19:51.16:0,51,616
chr10	55429336	.	TAAAG	T	1689.46	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.343;DP=562;FS=7.502;HRun=0;HaplotypeScore=92.1041;InbreedingCoeff=0.9930;MQ=71.31;MQ0=0;MQRankSum=-6.590;QD=39.29;ReadPosRankSum=-2.876;VQSLOD=2.9700;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:81.26:0,81,2090	1/1:1,13:14:30.10:568,30,0	0/0:18,0:17:43.32:0,43,824	0/0:7,0:7:17.98:0,18,443	0/0:24,0:24:72.20:0,72,1743	0/0:19,0:19:57.12:0,57,1225	0/0:18,0:18:48.13:0,48,1167	1/1:7,22:29:81.07:1243,81,0	0/0:12,0:12:36.12:0,36,938	0/0:22,0:22:60.20:0,60,1545	0/0:14,0:14:42.11:0,42,998	0/0:19,0:19:57.18:0,57,1464	0/0:20,0:20:60.19:0,60,1486	0/0:15,0:15:42.14:0,42,1072	0/0:24,0:24:72.25:0,72,1845	0/0:10,0:10:30.10:0,30,763	0/0:27,0:27:78.27:0,78,2102	0/0:16,0:16:48.13:0,48,1154	0/0:19,0:19:54.18:0,54,1290	0/0:43,0:43:99:0,125,2956	0/0:16,0:16:45.15:0,45,1210	0/0:22,0:22:63.20:0,63,1579	0/0:26,0:26:75.26:0,75,1960	0/0:9,0:9:20.99:0,21,502	0/0:20,0:20:60.19:0,60,1455	0/0:28,0:28:81.27:0,81,2092	0/0:25,0:25:75.19:0,75,1627	0/0:19,0:19:57.20:0,57,1535
chr10	55431962	.	CCACTA	C	462.56	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.775;DP=843;FS=1.180;HRun=0;HaplotypeScore=162.2149;InbreedingCoeff=0.9988;MQ=88.67;MQ0=0;MQRankSum=-3.103;QD=38.55;ReadPosRankSum=0.054;VQSLOD=3.1949;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,99,2818	1/1:1,11:12:30.10:557,30,0	0/0:38,0:40:83:0,83,1897	0/0:51,0:46:71.35:0,71,1849	0/0:27,0:27:78.27:0,78,2270	0/0:21,0:21:54.17:0,54,1453	0/0:30,0:30:69.24:0,69,1974	0/0:28,0:28:66.19:0,66,1831	0/0:36,0:36:78.25:0,78,2201	0/0:31,0:31:69.23:0,69,1969	0/0:18,0:18:45.14:0,45,1246	0/0:41,0:41:99:0,114,3349	0/0:31,0:31:78.27:0,78,2260	0/0:37,0:37:96.33:0,96,2818	0/0:46,0:46:99:0,114,3294	0/0:48,0:48:99:0,126,3573	0/0:36,0:36:93.32:0,93,2692	0/0:23,0:23:63.22:0,63,1772	0/0:14,0:14:33.11:0,33,970	0/0:20,0:20:48.16:0,48,1353	0/0:41,0:41:99:0,108,3130	0/0:24,0:24:63.22:0,63,1817	0/0:18,0:18:36.12:0,36,1014	0/0:38,0:38:96.33:0,96,2790	0/0:18,0:18:48.16:0,48,1381	0/0:29,0:29:81.27:0,81,2269	0/0:31,0:31:72.23:0,72,2007	0/0:11,0:11:33.11:0,33,889
chr10	55432804	.	G	GAA	4808.72	PASS	AB=1.000;AC=28;AF=0.500;AN=56;BaseQRankSum=-1.074;DP=519;FS=4.102;HRun=12;HaplotypeScore=121.2336;InbreedingCoeff=0.8100;MQ=63.18;MQ0=1;MQRankSum=-4.250;QD=17.55;ReadPosRankSum=-3.732;VQSLOD=2.9895;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:23.51:0,24,214	0/1:1,0:4:11.91:12,0,18	0/0:11,0:7:11.66:0,12,90	0/0:15,0:12:19.74:0,20,165	0/0:28,0:30:36.31:0,36,493	1/1:15,4:19:45.25:521,45,0	1/1:13,2:15:2.58:221,3,0	0/1:14,0:24:11.90:12,0,98	1/1:10,6:16:11.79:425,12,0	1/1:25,5:30:19.90:411,20,0	1/1:14,6:21:37.90:406,38,0	0/0:16,0:16:26.97:0,27,250	0/0:13,0:13:26.95:0,27,237	0/0:15,0:15:29.89:0,30,267	1/1:15,2:18:4.50:247,4,0	0/0:17,0:17:35.66:0,36,332	0/0:29,0:30:63.76:0,64,631	0/0:20,0:21:39.80:0,40,352	1/1:17,2:19:48.46:474,48,0	1/1:14,9:24:48.44:575,48,0	1/1:6,7:14:24.20:223,24,0	0/0:12,0:13:26.65:0,27,225	0/0:26,0:26:35.61:0,36,313	0/0:19,0:21:22.80:0,23,314	1/1:11,6:17:31.76:379,32,0	1/1:20,5:25:46.19:456,46,0	1/1:15,2:18:26.41:241,26,0	1/1:8,1:9:22.73:206,23,0
chr10	55432813	.	AAAAC	A	2016.91	PASS	AB=0.984;AC=16;AF=0.286;AN=56;BaseQRankSum=9.593;DP=546;FS=0.376;HRun=0;HaplotypeScore=150.0080;InbreedingCoeff=-0.2330;MQ=61.57;MQ0=5;MQRankSum=-8.448;QD=6.86;ReadPosRankSum=-5.789;VQSLOD=0.6176;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:9.23:0,9,260	1/1:4,0:4:11.82:111,12,0	0/0:9,0:5:7.46:0,7,141	0/0:15,0:11:15.77:0,16,247	0/0:25,0:25:23.65:0,24,714	0/1:22,0:22:99:163,0,153	0/1:12,2:14:99:139,0,116	0/1:31,0:26:99:311,0,189	0/1:20,0:20:78.15:78,0,173	0/1:30,1:31:43.03:295,0,43	0/1:20,0:20:77.88:98,0,78	0/0:16,0:16:26.92:0,27,326	0/0:13,0:13:25.37:0,25,316	0/0:18,0:18:39.87:0,40,470	0/1:19,0:19:40.11:166,0,40	0/0:16,0:16:35.93:0,36,564	0/0:32,0:32:53.23:0,53,948	0/0:22,0:22:43.34:0,43,601	0/1:22,0:20:39.59:158,0,40	0/1:26,0:26:99:125,0,212	0/1:14,1:14:1.94:2,0,125	0/0:18,0:17:9.91:0,10,351	0/0:23,0:23:45.91:0,46,523	0/0:25,0:25:26.94:0,27,433	0/1:20,0:20:99:138,0,106	0/1:24,0:24:99:214,0,147	0/1:16,0:16:39.58:119,0,40	0/1:10,0:10:30.60:60,0,31
chr10	55432814	.	AAAC	A	3660.15	PASS	AB=0.899;AC=22;AF=0.393;AN=56;BaseQRankSum=7.707;DP=553;FS=7.485;HRun=0;HaplotypeScore=136.6626;InbreedingCoeff=0.0743;MQ=61.43;MQ0=5;MQRankSum=-6.322;QD=11.37;ReadPosRankSum=-5.261;VQSLOD=1.4320;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:4.07:0,4,111	1/1:4,0:4:11.99:112,12,0	0/1:9,0:5:14.46:14,0,114	0/1:14,0:10:2.17:2,0,183	0/0:27,0:27:19.71:0,20,480	0/1:16,6:22:63.09:387,0,63	0/1:13,1:14:71.85:168,0,72	0/1:30,0:27:99:417,0,138	0/1:16,3:19:17.46:213,0,17	1/1:23,6:29:7.08:424,7,0	0/1:19,2:21:8.62:159,0,9	0/0:16,0:16:20.09:0,20,198	0/0:14,0:14:25.86:0,26,217	0/0:18,0:18:22.37:0,22,280	0/1:17,4:21:17.16:252,0,17	0/0:16,0:16:35.28:0,35,447	0/0:33,0:33:46.99:0,47,636	0/0:21,0:21:40.56:0,41,450	1/1:19,3:20:36.08:417,36,0	0/1:21,5:26:56.46:215,0,56	0/1:14,1:14:25.16:25,0,64	0/0:18,0:17:20.32:0,20,262	0/0:22,0:22:25.85:0,26,349	0/0:26,0:26:6.80:0,7,230	1/1:18,4:22:12.29:209,12,0	0/1:21,4:25:42.21:309,0,42	0/1:13,4:17:20.35:227,0,20	1/1:10,0:10:7.96:108,8,0
chr10	55432815	.	AAC	A	2387.74	PASS	AB=0.984;AC=18;AF=0.321;AN=56;BaseQRankSum=8.342;DP=554;FS=2.097;HRun=0;HaplotypeScore=131.1044;InbreedingCoeff=-0.0553;MQ=61.50;MQ0=5;MQRankSum=-6.957;QD=7.99;ReadPosRankSum=-6.107;VQSLOD=2.2975;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:8.61:0,9,195	1/1:4,0:4:10.75:69,11,0	0/0:9,0:5:3.53:0,4,95	0/0:14,0:10:14.66:0,15,207	0/0:27,0:27:7.38:0,7,550	0/1:21,2:23:84.87:269,0,85	0/1:15,0:15:69.36:184,0,69	0/1:32,0:27:99:233,0,103	0/1:19,0:19:94.38:94,0,102	0/1:27,1:28:33.70:320,0,34	0/1:21,0:21:72:92,0,72	0/0:16,0:16:26.78:0,27,269	0/0:14,0:14:27.66:0,28,275	0/0:18,0:18:28.98:0,29,340	0/1:21,0:21:61.26:159,0,61	0/0:16,0:16:35.53:0,36,454	0/0:34,0:34:30.79:0,31,757	0/0:21,0:21:41.62:0,42,507	1/1:21,1:20:6.08:301,6,0	0/1:25,1:26:99:149,0,133	0/1:14,0:13:24.76:25,0,56	0/0:18,0:17:20.27:0,20,295	0/0:21,0:21:39.21:0,39,403	0/0:27,0:27:7.41:0,7,306	0/1:22,0:22:47.72:133,0,48	0/1:24,1:25:99:255,0,121	0/1:17,0:17:21.96:124,0,22	1/1:9,1:10:16.87:151,17,0
chr10	55432817	.	CAA	C	598.38	PASS	AB=0.969;AC=10;AF=0.179;AN=56;BaseQRankSum=9.711;DP=539;FS=1.092;HRun=12;HaplotypeScore=137.4872;InbreedingCoeff=0.0488;MQ=59.94;MQ0=5;MQRankSum=-8.620;QD=3.25;ReadPosRankSum=0.343;VQSLOD=0.2563;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:10.77:0,11,129	1/1:1,3:4:11.97:129,12,0	0/0:8,0:4:11.18:0,11,96	0/0:13,0:9:13.31:0,13,190	0/0:25,0:25:38.42:0,38,393	0/1:23,0:23:10.05:10,0,247	0/1:15,0:15:10.16:10,0,133	0/1:20,9:25:99:544,0,129	0/0:19,0:19:21.58:0,22,325	0/1:27,0:27:18:18,0,217	0/0:19,0:19:23.25:0,23,301	0/0:16,0:16:11.86:0,12,132	0/0:14,0:14:12.27:0,12,133	0/0:17,0:17:21.82:0,22,244	0/1:20,0:20:0.83:1,0,147	0/0:17,0:17:25.42:0,25,306	0/0:35,0:35:31.61:0,32,451	0/0:20,0:20:34:0,34,349	0/1:21,0:19:10.64:11,0,131	0/0:25,0:25:36.97:0,37,457	0/0:15,0:14:27.41:0,27,230	0/0:17,0:16:14.89:0,15,175	0/0:21,0:21:22.57:0,23,282	0/1:28,0:28:2.02:2,0,192	0/0:21,0:21:18.26:0,18,258	0/0:24,0:24:7.47:0,7,336	0/1:16,0:16:4.74:5,0,105	0/0:10,0:10:11.46:0,11,89
chr10	55432819	.	AAAC	A	5613.42	PASS	AB=1.000;AC=49;AF=0.875;AN=56;BaseQRankSum=0.384;DP=533;FS=2.374;HRun=0;HaplotypeScore=128.8661;InbreedingCoeff=0.5269;MQ=60.03;MQ0=5;MQRankSum=3.958;QD=11.67;ReadPosRankSum=4.310;VQSLOD=4.6329;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:5,14:19:18.06:241,18,0	0/1:4,0:4:0:1,0,0	0/0:10,0:5:3.01:0,3,35	0/0:13,0:9:0.47:0,0,1	1/1:10,13:23:36.12:470,36,0	1/1:23,0:23:25.49:163,25,0	1/1:16,0:16:19.37:125,19,0	0/0:20,0:24:0.27:0,0,214	1/1:20,0:20:18.26:108,18,0	1/1:17,0:26:44.01:284,44,0	1/1:15,0:18:14.49:87,14,0	1/1:3,13:16:18.06:245,18,0	1/1:3,10:13:18.02:244,18,0	1/1:7,11:18:24.08:325,24,0	1/1:20,0:20:28.24:170,28,0	1/1:8,10:18:11.87:162,12,0	1/1:15,20:35:45.15:608,45,0	1/1:14,5:19:0.61:362,1,0	1/1:19,0:17:19.06:125,19,0	1/1:25,0:25:29.29:176,29,0	1/1:15,0:14:4.78:24,5,0	1/1:4,13:16:33.02:426,33,0	1/1:7,13:20:24.03:326,24,0	1/1:6,22:29:22.71:472,23,0	1/1:21,0:21:20.57:128,21,0	1/1:25,0:25:33.89:211,34,0	1/1:16,0:16:14.83:100,15,0	1/1:6,0:6:5.45:28,5,0
chr10	55432821	.	ACAACAAC	A	5086.43	PASS	AB=0.961;AC=16;AF=0.286;AN=56;BaseQRankSum=5.968;DP=525;FS=6.911;HRun=0;HaplotypeScore=161.0977;InbreedingCoeff=0.2051;MQ=60.06;MQ0=5;MQRankSum=-4.354;QD=20.85;ReadPosRankSum=-0.308;VQSLOD=3.6673;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:19:13.39:0,13,332	0/0:4,0:4:8.84:0,9,66	0/0:9,0:4:11.96:0,12,135	0/0:14,0:10:20.84:0,21,237	0/0:21,0:21:60.06:0,60,790	0/1:23,0:23:99:473,0,100	0/1:17,0:17:5.49:350,0,5	0/0:33,0:28:82.76:0,83,1430	0/1:19,0:19:33.10:347,0,33	1/1:25,0:25:16.98:780,17,0	1/1:16,0:16:15.90:351,16,0	0/0:16,0:16:27.09:0,27,381	0/0:13,0:13:27.09:0,27,374	0/0:18,0:18:39.13:0,39,540	0/1:20,2:22:14.80:518,0,15	0/0:17,0:17:30.08:0,30,396	0/0:33,0:33:70.44:0,70,1066	0/0:19,0:19:28.16:0,28,749	1/1:16,1:15:32.10:457,32,0	0/1:25,0:25:58.35:448,0,58	0/1:13,0:12:35.21:59,0,35	0/0:17,0:16:45.13:0,45,596	0/0:19,0:19:42.14:0,42,581	0/0:29,0:29:50.74:0,51,686	0/1:21,0:21:7.15:338,0,7	0/1:25,0:25:10.67:566,0,11	0/1:9,7:16:28.07:322,0,28	0/1:5,0:5:2.51:79,0,3
chr10	55432824	.	ACAAC	A	6034.03	PASS	AB=0.776;AC=22;AF=0.393;AN=56;BaseQRankSum=3.767;DP=514;FS=1.826;HRun=0;HaplotypeScore=126.2361;InbreedingCoeff=0.6426;MQ=58.01;MQ0=6;MQRankSum=-5.358;QD=26.82;ReadPosRankSum=2.196;VQSLOD=5.0394;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:27.71:0,28,252	0/0:4,0:4:9.03:0,9,110	0/0:11,0:4:12.02:0,12,171	0/0:16,0:11:23.79:0,24,282	0/0:21,0:21:52.40:0,52,433	0/1:16,6:23:19.50:582,0,19	1/1:13,3:16:3.09:416,3,0	0/0:38,0:34:99:0,101,1766	0/1:9,8:17:22.32:386,0,22	1/1:15,8:23:35.90:871,36,0	1/1:12,2:14:14.06:353,14,0	0/0:18,0:18:28.37:0,28,266	0/0:13,0:13:19.49:0,19,129	0/0:19,0:19:38.98:0,39,361	1/1:8,14:22:10.78:492,11,0	0/0:15,0:15:23.78:0,24,240	0/0:32,0:32:62.83:0,63,551	0/0:18,0:18:44.02:0,44,382	1/1:9,3:10:27.53:485,28,0	1/1:12,10:23:9.70:599,10,0	0/1:10,2:11:8.50:112,0,8	0/0:17,0:16:33.69:0,34,262	0/0:19,0:19:35.63:0,36,296	0/0:27,0:27:41.80:0,42,297	1/1:6,12:20:24.22:471,24,0	1/1:8,15:23:34.60:866,35,0	0/1:12,4:16:20.63:280,0,21	1/1:3,0:4:7.40:122,7,0
chr10	55432827	.	AC	A	2752.59	PASS	AB=0.919;AC=14;AF=0.250;AN=56;BaseQRankSum=9.914;DP=512;FS=1.366;HRun=1;HaplotypeScore=109.4946;InbreedingCoeff=-0.2065;MQ=56.84;MQ0=7;MQRankSum=-4.846;QD=12.74;ReadPosRankSum=1.955;VQSLOD=2.6465;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:23.32:0,23,231	0/0:4,0:4:9.02:0,9,111	0/0:11,0:4:9.03:0,9,130	0/0:16,0:8:17.64:0,18,207	0/0:20,0:20:39.86:0,40,339	0/1:13,10:23:99:282,0,172	0/1:9,5:14:74.97:212,0,75	0/0:42,0:37:99:0,106,1505	0/1:15,1:16:99:222,0,161	0/1:23,0:23:99:415,0,129	0/1:11,1:12:99:180,0,121	0/0:19,0:19:25.49:0,25,220	0/0:13,0:13:13.80:0,14,106	0/0:20,0:20:31.32:0,31,289	0/1:21,0:21:63.62:210,0,64	0/0:14,0:14:16.89:0,17,182	0/0:32,0:32:49.38:0,49,471	0/0:17,1:18:14.99:0,15,275	1/1:7,4:9:3.01:227,3,0	0/1:22,0:22:99:291,0,257	0/1:12,1:12:25.77:26,0,140	0/0:19,0:18:33.02:0,33,275	0/0:20,0:20:31.31:0,31,288	0/0:28,0:28:33.58:0,34,250	0/1:19,0:19:75.62:229,0,76	0/1:22,0:22:99:464,0,136	0/1:16,0:16:90.11:120,0,90	0/1:3,1:4:30.73:31,0,50
chr10	55432958	.	AGAACTAGGATGAGCAAAGGGGAGACGATGTCAG	A	167.27	PASS	AB=0.750;AC=1;AF=0.018;AN=56;BaseQRankSum=-2.697;DP=524;FS=52.273;HRun=0;HaplotypeScore=384.3451;InbreedingCoeff=-0.0213;MQ=70.42;MQ0=5;MQRankSum=-5.643;QD=13.94;ReadPosRankSum=-6.490;VQSLOD=-0.4871;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:49.21:0,49,7768	0/0:4,0:4:8.95:0,9,1028	0/0:21,0:15:43.70:0,44,1846	0/0:11,0:9:27.09:0,27,1675	0/0:23,0:23:66.23:0,66,8307	0/0:17,0:17:38.34:0,38,4620	0/0:19,0:19:50.90:0,51,5077	0/0:35,0:35:94.86:0,95,7338	0/0:14,0:14:32.85:0,33,3866	0/0:20,0:20:57.18:0,57,5807	0/0:14,0:14:25.71:0,26,3941	0/1:8,4:12:99:242,0,2438	0/0:18,0:20:50.87:0,51,5958	0/0:15,0:15:42.14:0,42,4559	0/0:19,0:19:44.76:0,45,4813	0/0:16,0:16:35.32:0,35,4972	0/0:26,0:26:53.91:0,54,5452	0/0:23,0:23:53.61:0,54,6701	0/0:25,0:24:57.45:0,57,5743	0/0:16,0:17:34.17:0,34,4471	0/0:14,0:14:38.21:0,38,4051	0/0:15,0:15:39.01:0,39,4382	0/0:19,0:19:22.98:0,23,5198	0/0:20,0:20:47.62:0,48,4420	0/0:14,0:13:25.19:0,25,3783	0/0:26,0:25:72.17:0,72,8651	0/0:15,0:16:35.08:0,35,4183	0/0:8,0:8:13.99:0,14,941
chr10	55434605	.	AAAACAAACAAAC	A	14700.57	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-3.442;DP=675;FS=6.515;HRun=0;HaplotypeScore=255.5854;InbreedingCoeff=0.9756;MQ=57.27;MQ0=1;MQRankSum=-10.731;QD=51.76;ReadPosRankSum=3.554;VQSLOD=3.8126;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:39:81.20:0,81,1922	0/0:2,0:13:30.10:0,30,815	0/0:32,0:24:38.13:0,38,1530	0/0:19,0:16:36.12:0,36,1628	0/0:12,0:32:81.25:0,81,1968	1/1:6,17:23:21.55:1263,22,0	1/1:6,15:21:18.06:639,18,0	0/0:18,0:37:90.26:0,90,2084	1/1:3,15:18:24.08:851,24,0	1/1:4,16:20:45.13:1287,45,0	1/1:9,15:24:39.09:1131,39,0	0/0:8,0:25:48.16:0,48,1252	0/0:20,0:20:57.20:0,57,2967	0/0:31,0:31:81.26:0,81,4137	1/1:4,22:26:45.15:1588,45,0	0/0:8,0:31:52.73:0,53,1357	0/0:5,0:22:45.13:0,45,1057	0/0:9,0:19:36.12:0,36,882	1/1:7,15:22:42.14:1155,42,0	1/1:8,19:27:51.17:1662,51,0	1/1:7,10:17:6.02:213,6,0	0/0:5,0:21:48.16:0,48,1125	0/0:6,0:30:52.59:0,53,1297	0/0:7,0:20:36.12:0,36,889	1/1:2,16:18:39.13:1376,39,0	1/1:7,16:23:45.12:1295,45,0	1/1:8,24:31:54.03:1921,54,0	1/1:3,10:13:9.03:320,9,0
chr10	55436270	.	C	CGA	1947.65	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-9.054;DP=781;FS=11.017;HRun=0;HaplotypeScore=89.1006;InbreedingCoeff=0.9897;MQ=71.94;MQ0=1;MQRankSum=-0.107;QD=37.45;ReadPosRankSum=-4.241;VQSLOD=3.8796;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,160,2161	1/1:2,5:7:15.05:266,15,0	0/0:27,0:25:63.18:0,63,805	0/0:27,0:24:53.17:0,53,689	0/0:42,0:42:99:0,117,1548	0/0:26,0:26:72.24:0,72,985	0/0:25,0:25:75.25:0,75,1029	1/1:8,36:45:99:1800,108,0	0/0:32,0:32:96.31:0,96,1301	0/0:42,0:42:99:0,120,1627	0/0:19,0:19:48.13:0,48,639	0/0:20,0:20:54.11:0,54,699	0/0:27,0:27:78.26:0,78,1063	0/0:22,0:22:54.18:0,54,741	0/0:43,0:43:99:0,114,1565	0/0:22,0:22:63.21:0,63,864	0/0:39,0:39:99:0,108,1463	0/0:23,0:23:54.12:0,54,704	0/0:26,0:25:65:0,65,838	0/0:19,0:19:45.15:0,45,617	0/0:28,0:28:81.21:0,81,1085	0/0:23,0:23:54.18:0,54,741	0/0:33,0:33:93.30:0,93,1259	0/0:26,0:26:75.21:0,75,1008	0/0:31,0:31:87.28:0,87,1178	0/0:24,0:24:72.20:0,72,965	0/0:20,0:20:48:0,48,611	0/0:8,0:8:21.07:0,21,288
chr10	55437119	.	CT	C	3536.66	PASS	AB=0.705;AC=25;AF=0.446;AN=56;BaseQRankSum=10.362;DP=656;FS=2.466;HRun=13;HaplotypeScore=88.3812;InbreedingCoeff=0.7241;MQ=76.14;MQ0=0;MQRankSum=2.172;QD=10.95;ReadPosRankSum=3.219;VQSLOD=3.6401;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,1:37:62.43:0,62,716	0/0:7,0:7:1.68:0,2,156	0/0:20,1:18:6.50:0,7,78	0/1:21,1:17:46.35:46,0,64	0/0:23,0:25:25.92:0,26,371	1/1:7,17:25:19.83:304,20,0	1/1:4,13:19:42.82:296,43,0	0/0:32,0:36:71.52:0,72,626	0/1:3,15:21:6.88:256,0,7	1/1:10,11:24:38.43:248,38,0	1/1:4,10:16:11.06:224,11,0	0/0:18,2:20:1.17:0,1,307	0/0:15,0:15:39.03:0,39,368	0/0:20,0:20:33.44:0,33,289	1/1:4,23:29:53.86:382,54,0	0/0:17,1:20:34.75:0,35,448	0/0:25,5:32:6.47:0,6,493	0/0:19,1:24:12.42:0,12,314	0/1:10,15:26:2.08:281,0,2	1/1:14,20:36:28.46:354,28,0	1/1:8,14:24:30.88:209,31,0	0/0:27,2:31:45.94:0,46,589	0/0:16,0:17:23.67:0,24,203	0/0:26,2:28:56.15:0,56,681	1/1:2,8:11:22.02:157,22,0	1/1:13,14:27:17.35:258,17,0	1/1:9,20:30:59.71:412,60,0	1/1:4,7:11:14.90:109,15,0
chr10	55438694	.	CCCCTG	C	1590.91	PASS	AB=1.000;AC=27;AF=0.750;AN=36;BaseQRankSum=-2.080;DP=141;FS=19.728;HRun=0;HaplotypeScore=57.5692;InbreedingCoeff=0.5567;MQ=85.41;MQ0=7;MQRankSum=-1.022;QD=31.19;ReadPosRankSum=0.995;VQSLOD=1.7052;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:2,0:2:5.31:0,5,26	1/1:2,0:2:3.01:38,3,0	0/0:42,0:14:32.57:0,33,753	0/0:39,0:10:5.95:0,6,149	1/1:1,0:1:1.55:4,2,0	1/1:6,0:6:17.95:244,18,0	1/1:1,0:1:2.98:21,3,0	1/1:5,1:6:14.79:211,15,0	./.	./.	1/1:1,1:2:5.98:82,6,0	./.	./.	0/1:2,0:2:3.99:4,0,13	1/1:4,0:4:9.03:168,9,0	./.	1/1:4,0:4:4.50:13,5,0	./.	1/1:4,0:4:11.89:108,12,0	./.	./.	./.	0/0:1,0:1:2.98:0,3,22	./.	1/1:2,1:3:9.03:171,9,0	1/1:4,0:4:12.01:180,12,0	1/1:4,1:6:17.85:292,18,0	1/1:6,0:5:14.97:182,15,0
chr10	55438695	.	CCCTG	C	2272.78	PASS	AC=32;AF=0.889;AN=36;BaseQRankSum=-2.973;DP=145;FS=8.789;HRun=0;HaplotypeScore=50.8244;InbreedingCoeff=0.4917;MQ=84.63;MQ0=7;MQRankSum=-1.260;QD=41.32;ReadPosRankSum=1.692;VQSLOD=2.9133;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,0:2:5.70:31,6,0	1/1:0,2:2:3.01:52,3,0	0/0:42,0:14:32.93:0,33,676	0/0:43,0:11:4.42:0,4,190	1/1:2,0:2:5.65:29,6,0	1/1:0,5:6:18.06:345,18,0	1/1:0,1:1:3.01:63,3,0	1/1:1,5:6:14.62:275,15,0	./.	./.	1/1:2,0:2:6.02:91,6,0	./.	./.	1/1:2,0:2:5.69:50,6,0	1/1:0,4:4:9.03:158,9,0	./.	1/1:4,0:4:9.02:100,9,0	./.	1/1:0,4:4:12.04:240,12,0	./.	./.	./.	1/1:1,0:1:2.37:8,2,0	./.	1/1:1,2:3:9.03:150,9,0	1/1:0,4:4:12.04:216,12,0	1/1:2,3:6:18.06:298,18,0	1/1:0,5:5:15.05:278,15,0
chr10	55438703	.	AAG	A	735.58	PASS	AB=0.998;AC=32;AF=0.640;AN=50;BaseQRankSum=0.787;DP=249;FS=14.316;HRun=0;HaplotypeScore=58.0810;InbreedingCoeff=0.0302;MQ=74.82;MQ0=14;MQRankSum=1.370;QD=3.18;ReadPosRankSum=-1.549;VQSLOD=-0.1726;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:5:7.97:0,8,36	1/1:0,2:2:3.01:33,3,0	0/1:62,0:20:2.73:3,0,222	0/1:61,1:17:15.39:15,0,59	0/1:9,0:9:20.48:45,0,20	1/1:9,0:9:13.98:73,14,0	1/1:1,0:1:1.25:3,1,0	1/1:10,1:9:20.70:145,21,0	./.	1/1:6,0:5:3.62:57,4,0	1/1:3,0:3:8.89:63,9,0	1/1:3,0:2:3.85:22,4,0	0/0:4,0:4:0.47:0,0,18	0/1:2,0:2:9.42:16,0,9	0/1:5,0:5:3.10:26,0,3	0/0:3,0:1:2.80:0,3,13	0/1:9,0:8:7.71:8,0,17	0/1:5,0:5:8.92:9,0,27	0/1:8,0:7:9.45:9,0,17	1/1:4,0:3:4.21:23,4,0	0/1:2,0:2:1.65:2,0,9	./.	0/0:3,0:2:1.41:0,1,14	./.	1/1:3,1:4:9.82:78,10,0	1/1:7,0:7:17.32:112,17,0	1/1:7,2:9:14.36:108,14,0	0/1:8,0:7:27.71:28,0,34
chr10	55438730	.	A	AC	440.50	PASS	AC=4;AF=0.077;AN=52;BaseQRankSum=-3.138;DP=342;FS=8.189;HRun=0;HaplotypeScore=70.4465;InbreedingCoeff=0.6911;MQ=76.46;MQ0=20;MQRankSum=2.786;QD=15.73;ReadPosRankSum=-2.538;VQSLOD=4.2945;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:8:23.98:0,24,245	1/1:4,0:4:8.85:83,9,0	0/0:82,0:30:34.83:0,35,631	0/0:84,0:28:23.26:0,23,425	0/0:10,0:10:30.07:0,30,378	0/0:8,0:8:24.05:0,24,305	0/0:3,0:3:8.99:0,9,103	1/1:2,21:22:51.62:469,52,0	./.	0/0:7,0:7:21.06:0,21,265	0/0:3,0:3:9.03:0,9,121	0/0:5,0:4:12.04:0,12,164	0/0:4,0:4:12.04:0,12,162	0/0:3,0:3:9.03:0,9,117	0/0:4,0:4:9.03:0,9,117	0/0:2,0:1:0:0,0,0	0/0:14,0:13:32.37:0,32,321	0/0:11,0:11:30.09:0,30,394	0/0:10,0:9:21.05:0,21,260	0/0:6,0:5:12.04:0,12,160	0/0:8,0:8:24.07:0,24,311	./.	0/0:3,0:2:6.02:0,6,80	0/0:1,0:1:2.97:0,3,20	0/0:7,0:7:21.06:0,21,260	0/0:9,0:9:27.01:0,27,301	0/0:11,0:11:33:0,33,372	0/0:9,0:8:18.49:0,18,226
chr10	55438896	.	A	ATATATAT	2253.34	PASS	AB=1.000;AC=6;AF=0.130;AN=46;BaseQRankSum=-5.048;DP=232;FS=24.811;HRun=0;HaplotypeScore=63.7213;InbreedingCoeff=0.0665;MQ=74.92;MQ0=15;MQRankSum=-6.422;QD=30.04;ReadPosRankSum=-3.934;VQSLOD=1.0753;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:23:37.59:0,38,1176	./.	0/0:9,0:5:5.72:0,6,75	0/1:17,0:9:5.80:6,0,145	0/0:3,0:3:9.03:0,9,235	0/1:5,0:5:28.23:28,0,118	0/0:4,0:2:6.01:0,6,59	1/1:5,24:33:96.31:2293,96,0	0/0:1,0:1:3.01:0,3,30	./.	./.	0/0:4,0:4:12.03:0,12,267	0/0:4,0:4:9.01:0,9,132	0/0:2,0:2:3:0,3,76	0/0:3,0:3:6.01:0,6,61	./.	0/0:38,0:35:99:0,99,2158	0/0:30,0:26:57.89:0,58,1211	0/1:8,0:9:3.52:4,0,231	0/0:2,0:1:3.01:0,3,30	0/0:3,0:2:3.01:0,3,30	0/0:1,0:1:3.01:0,3,80	0/0:2,0:2:6.01:0,6,100	./.	0/0:5,0:5:9.02:0,9,120	0/0:7,0:8:18.48:0,18,175	0/0:8,0:6:11.92:0,12,104	0/1:8,0:8:35.43:35,0,100
chr10	55438897	.	T	TA	1663.78	PASS	AB=0.653;AC=22;AF=0.478;AN=46;BaseQRankSum=0.546;DP=230;FS=15.687;HRun=1;HaplotypeScore=34.8727;InbreedingCoeff=0.6210;MQ=73.33;MQ0=15;MQRankSum=-4.001;QD=18.08;ReadPosRankSum=0.223;VQSLOD=2.2022;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:23:58.01:0,58,723	./.	0/0:8,0:4:6.23:0,6,55	0/0:16,0:9:3.53:0,4,66	0/0:3,0:3:9.03:0,9,125	0/1:4,2:5:5.35:79,0,5	1/1:2,2:2:6.02:86,6,0	1/1:30,0:29:76.04:392,76,0	1/1:1,1:2:3:42,3,0	./.	./.	0/0:4,0:4:12.04:0,12,159	0/0:3,0:3:9.03:0,9,110	0/0:2,0:2:5.97:0,6,60	1/1:0,3:3:6.02:85,6,0	./.	0/0:38,0:35:99:0,102,1319	0/0:30,0:26:65.46:0,65,732	1/1:2,8:10:17.23:285,17,0	1/1:1,1:1:3.01:43,3,0	1/1:2,2:2:3.01:43,3,0	0/0:1,0:1:3.01:0,3,42	0/0:2,0:2:6.02:0,6,75	./.	0/1:1,4:5:1.25:77,0,1	1/1:4,4:8:19.86:247,20,0	1/1:0,9:7:12.04:169,12,0	1/1:2,7:8:21.06:283,21,0
chr10	55442283	.	TTTTC	T	1672.07	PASS	AB=1.000;AC=25;AF=0.446;AN=56;BaseQRankSum=2.166;DP=494;FS=5.793;HRun=0;HaplotypeScore=88.3016;InbreedingCoeff=0.7529;MQ=68.89;MQ0=1;MQRankSum=1.809;QD=7.50;ReadPosRankSum=-0.478;VQSLOD=1.7576;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:54.01:0,54,773	0/0:11,0:11:6.01:0,6,102	0/0:18,0:13:2.68:0,3,11	0/0:10,0:7:0.47:0,0,1	0/0:29,0:29:54.54:0,55,869	1/1:13,1:14:27.97:225,28,0	1/1:13,0:13:23.43:183,23,0	0/0:33,0:29:41.58:0,42,394	1/1:13,0:13:9:80,9,0	0/1:21,0:21:46.17:134,0,46	1/1:12,2:14:23.74:294,24,0	0/0:14,0:14:21.02:0,21,292	0/0:20,0:20:53.98:0,54,889	0/0:22,0:22:42.11:0,42,655	1/1:22,0:22:8.96:62,9,0	0/0:15,0:15:30.06:0,30,427	0/0:22,0:22:53.92:0,54,865	0/0:8,0:8:12.89:0,13,184	1/1:22,0:22:22.20:171,22,0	1/1:16,1:17:26.84:217,27,0	1/1:9,0:9:11.04:87,11,0	0/0:12,0:12:12.01:0,12,225	0/0:22,0:22:39.05:0,39,612	0/0:14,0:14:0.01:0,0,177	1/1:22,0:22:8.93:62,9,0	1/1:15,1:16:29.96:286,30,0	1/1:29,0:29:5.96:47,6,0	1/1:11,0:11:3:27,3,0
chr10	55442310	.	T	TCTTTCTTTCTTTCTTTC	1135.94	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-1.019;DP=543;FS=3.044;HRun=0;HaplotypeScore=253.1600;InbreedingCoeff=0.8489;MQ=60.32;MQ0=5;MQRankSum=-2.384;QD=26.42;ReadPosRankSum=0.302;VQSLOD=2.3298;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:66.22:0,66,1684	1/1:0,7:12:5.98:471,6,0	0/0:21,0:6:13.16:0,13,82	0/0:10,0:3:7.56:0,8,36	0/0:26,0:26:71.90:0,72,1975	0/0:26,0:26:54.27:0,54,1141	0/0:11,0:11:30.41:0,30,748	1/1:26,0:23:51.49:777,51,0	0/0:16,0:16:18.14:0,18,463	0/0:25,0:24:57.28:0,57,706	0/0:25,0:25:62.34:0,62,1070	0/0:11,0:11:33.04:0,33,721	0/0:29,0:29:83.01:0,83,2122	0/0:23,0:23:63.06:0,63,1681	0/0:22,0:22:21.90:0,22,532	0/0:19,0:19:56.73:0,57,1136	0/0:26,0:26:66.13:0,66,1916	0/0:11,0:10:25.54:0,26,384	0/0:19,0:19:42.29:0,42,630	0/0:23,0:23:50.33:0,50,677	0/0:8,0:8:21.14:0,21,352	0/0:14,0:14:36.03:0,36,690	0/0:19,0:19:54.02:0,54,1256	0/0:10,0:10:26.95:0,27,443	0/0:21,0:21:28.48:0,28,466	0/0:28,0:27:68.90:0,69,1091	0/0:26,0:26:20.38:0,20,274	0/0:7,0:7:7.83:0,8,167
chr10	55446768	.	AT	A	818.14	PASS	AB=0.889;AC=5;AF=0.089;AN=56;BaseQRankSum=6.063;DP=444;FS=15.264;HRun=10;HaplotypeScore=45.2147;InbreedingCoeff=0.8063;MQ=81.02;MQ0=0;MQRankSum=2.148;QD=17.79;ReadPosRankSum=-4.742;VQSLOD=1.3792;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:75.18:0,75,818	1/1:0,3:3:9:78,9,0	0/0:19,0:19:28.83:0,29,294	0/0:8,0:8:15.03:0,15,157	0/0:22,1:23:37.12:0,37,637	0/0:14,0:14:39.10:0,39,423	0/0:10,0:10:24.06:0,24,266	1/1:1,34:35:98.95:853,99,0	0/0:17,0:17:48.13:0,48,531	0/0:15,0:15:42.11:0,42,465	0/0:21,0:21:57.15:0,57,624	0/0:15,0:15:45.12:0,45,498	0/0:14,0:14:39.10:0,39,424	0/0:20,0:20:54.15:0,54,597	0/0:16,0:16:48.13:0,48,530	0/0:5,0:5:15.04:0,15,166	0/0:19,0:19:54.15:0,54,597	0/0:7,0:7:21.05:0,21,227	0/0:10,0:11:29.91:0,30,313	0/0:30,0:30:87.24:0,87,962	0/0:8,0:8:18.05:0,18,199	0/0:11,0:11:33.09:0,33,365	0/0:20,0:20:48.13:0,48,531	0/0:13,0:13:36.10:0,36,398	0/1:7,1:8:2:2,0,203	0/0:28,0:29:87.05:0,87,933	0/0:14,0:14:39.09:0,39,424	0/0:13,0:13:39.09:0,39,423
chr10	55447944	.	C	CT	5986.86	PASS	AB=0.781;AC=26;AF=0.464;AN=56;BaseQRankSum=-11.769;DP=580;FS=17.241;HRun=9;HaplotypeScore=69.9140;InbreedingCoeff=0.8438;MQ=68.15;MQ0=9;MQRankSum=0.775;QD=22.26;ReadPosRankSum=2.394;VQSLOD=3.8874;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:86.70:0,87,736	0/0:1,0:12:20.37:0,20,60	0/1:33,0:19:20.89:21,0,57	0/0:52,1:23:13.01:0,13,151	0/0:21,0:21:50.97:0,51,443	1/1:2,21:23:37.11:638,37,0	1/1:1,12:13:33.09:365,33,0	0/0:11,0:35:32.44:0,32,103	1/1:4,10:14:27.07:298,27,0	1/1:2,15:17:20.15:412,20,0	1/1:1,23:24:40.12:671,40,0	0/0:14,0:14:35.98:0,36,313	0/0:12,0:12:32.99:0,33,285	0/0:8,0:8:24:0,24,208	0/1:4,14:18:30.01:377,0,30	0/0:18,0:18:47.99:0,48,417	0/0:27,0:28:74:0,74,630	0/0:20,0:20:50.81:0,51,439	1/1:6,9:14:32.82:340,33,0	1/1:5,24:29:43.09:688,43,0	1/1:2,9:11:27.07:299,27,0	0/0:6,0:6:18:0,18,156	0/0:20,0:20:53.97:0,54,465	0/0:28,0:28:48.45:0,48,506	1/1:1,20:22:50.21:591,50,0	1/1:0,19:19:57.11:617,57,0	1/1:4,13:17:10.04:339,10,0	1/1:3,11:13:30.08:332,30,0
chr10	55448106	.	ACTAC	A	856	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.030;DP=612;FS=2.073;HRun=0;HaplotypeScore=94.5236;InbreedingCoeff=0.9952;MQ=79.99;MQ0=0;MQRankSum=-3.861;QD=27.61;ReadPosRankSum=0.583;VQSLOD=3.5369;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,129,3264	1/1:0,7:7:18.06:331,18,0	0/0:13,0:13:39.08:0,39,955	0/0:18,0:18:42.07:0,42,939	0/0:38,0:38:99:0,114,2973	0/0:17,0:17:45.15:0,45,1188	0/0:16,0:16:39.13:0,39,996	1/1:6,18:18:36.12:644,36,0	0/0:20,0:20:60.19:0,60,1498	0/0:29,0:29:81.28:0,81,2066	0/0:11,0:11:30.10:0,30,792	0/0:19,0:19:57.20:0,57,1505	0/0:28,0:28:75.23:0,75,1845	0/0:19,0:19:54.19:0,54,1415	0/0:23,0:23:69.24:0,69,1822	0/0:21,0:21:63.22:0,63,1664	0/0:24,0:24:63.19:0,63,1588	0/0:13,0:13:33.11:0,33,871	0/0:19,0:19:57.20:0,57,1483	0/0:29,0:29:84.29:0,84,2177	0/0:29,0:29:78.25:0,78,1994	0/0:16,0:16:48.16:0,48,1254	0/0:26,0:26:78.27:0,78,2044	0/0:22,0:22:63.22:0,63,1613	0/0:20,0:20:60.21:0,60,1578	0/0:24,0:24:60.21:0,60,1509	0/0:25,0:25:60.21:0,60,1550	0/0:13,0:13:36.12:0,36,949
chr10	55449183	.	AT	A	11386.91	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=14.499;DP=611;FS=1.678;HRun=2;HaplotypeScore=59.3628;InbreedingCoeff=0.9687;MQ=76.49;MQ0=0;MQRankSum=-1.567;QD=36.61;ReadPosRankSum=1.297;VQSLOD=5.4564;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:60.19:0,60,877	0/0:7,0:7:21.07:0,21,315	0/0:17,0:17:51.16:0,51,725	0/0:8,0:8:20.51:0,21,231	0/0:34,0:34:96.33:0,96,1438	1/1:0,25:25:66.21:857,66,0	1/1:1,10:11:27.09:351,27,0	0/0:26,0:25:75.24:0,75,1105	1/1:0,15:15:39.13:506,39,0	1/1:1,37:38:99:1412,111,0	1/1:0,28:28:84.27:1085,84,0	0/0:16,0:16:48.16:0,48,719	0/0:25,0:25:75.24:0,75,1104	0/0:27,0:27:81.24:0,81,1173	1/1:0,35:35:96.31:1246,96,0	0/0:23,2:25:1.53:0,2,939	0/0:11,0:11:27.09:0,27,405	0/0:17,0:17:51.10:0,51,716	1/1:0,16:16:48.11:590,48,0	1/1:0,25:25:69.22:892,69,0	1/1:0,16:16:48.16:623,48,0	0/0:24,0:24:72.24:0,72,1078	0/0:21,0:21:63.21:0,63,943	0/0:22,0:22:63.20:0,63,923	1/1:0,21:21:57.19:740,57,0	1/1:0,33:33:99:1256,99,0	1/1:0,40:40:99:1516,117,0	1/1:0,8:8:24.08:312,24,0
chr10	55449517	.	A	AT	14739.21	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-16.652;DP=664;FS=0.924;HRun=1;HaplotypeScore=63.5504;InbreedingCoeff=0.9977;MQ=90.75;MQ0=0;MQRankSum=-0.751;QD=41.06;ReadPosRankSum=1.912;VQSLOD=5.4817;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:50.09:0,50,678	1/1:0,6:6:15.05:225,15,0	0/0:30,0:30:84.05:0,84,1009	0/0:23,0:23:63.14:0,63,762	0/0:34,0:34:75.23:0,75,956	1/1:1,29:30:78.26:1168,78,0	1/1:0,19:19:54.18:808,54,0	1/1:0,18:18:54.17:787,54,0	1/1:0,20:20:51.17:764,51,0	1/1:0,28:28:84.26:1218,84,0	1/1:0,23:23:69.19:1008,69,0	0/0:25,0:25:75.24:0,75,973	0/0:30,0:30:90.28:0,90,1155	0/0:20,0:20:60.18:0,60,765	1/1:0,32:32:90.30:1348,90,0	0/0:32,0:32:96.26:0,96,1189	0/0:19,0:19:54.18:0,54,700	0/0:12,0:12:30.10:0,30,389	1/1:1,11:12:36.09:497,36,0	1/1:0,29:29:87.22:1254,87,0	1/1:2,40:42:99:1708,114,0	0/0:25,0:25:69.21:0,69,881	0/0:20,0:20:54.15:0,54,684	0/0:16,0:16:45.13:0,45,568	1/1:0,13:13:36.12:539,36,0	1/1:0,23:23:69.23:1034,69,0	1/1:2,48:49:99:1841,123,0	1/1:0,14:14:36.12:539,36,0
chr10	55449871	.	C	CT	500.54	PASS	AB=0.950;AC=6;AF=0.107;AN=56;BaseQRankSum=-3.938;DP=522;FS=0.793;HRun=10;HaplotypeScore=54.7822;InbreedingCoeff=0.5717;MQ=57.83;MQ0=19;MQRankSum=-0.288;QD=7.47;ReadPosRankSum=-4.254;VQSLOD=0.4785;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:30:77.91:0,78,640	1/1:2,4:6:9.02:96,9,0	0/1:13,0:8:12.33:12,0,50	0/0:11,0:2:5.99:0,6,49	0/0:23,0:23:59.91:0,60,490	0/0:14,0:13:29.96:0,30,246	0/0:12,0:11:23.94:0,24,193	1/1:10,20:30:30.77:500,31,0	0/0:17,0:17:41.93:0,42,345	0/0:21,0:21:56.90:0,57,464	0/0:17,0:17:38.93:0,39,320	0/0:19,0:18:35.90:0,36,296	0/0:10,0:10:20.97:0,21,172	0/0:12,0:11:23.95:0,24,194	0/0:16,0:17:37.96:0,38,301	0/0:20,0:20:41.90:0,42,344	0/0:35,0:33:83.39:0,83,674	0/0:29,0:25:50.75:0,51,409	0/0:17,0:17:44.90:0,45,364	0/0:22,0:22:47.91:0,48,394	0/0:18,0:18:44.94:0,45,369	0/1:16,2:18:22.03:22,0,253	0/0:18,0:19:46.95:0,47,372	0/0:17,0:15:32.96:0,33,271	0/0:15,0:13:38.94:0,39,318	0/0:24,0:24:56.91:0,57,468	0/0:25,0:25:59.70:0,60,492	0/0:10,0:8:11.96:0,12,98
chr10	55450420	.	GA	G	2682.54	PASS	AB=0.906;AC=29;AF=0.518;AN=56;BaseQRankSum=3.653;DP=617;FS=4.449;HRun=12;HaplotypeScore=73.6452;InbreedingCoeff=0.5324;MQ=43.86;MQ0=55;MQRankSum=-6.107;QD=9.25;ReadPosRankSum=0.332;VQSLOD=2.9591;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:36:64.43:0,64,611	0/1:6,0:5:1.86:2,0,35	0/0:70,2:2:0:0,0,0	0/0:78,1:12:8.33:0,8,66	0/0:23,1:24:0.60:0,1,294	1/1:5,5:10:26.89:206,27,0	1/1:8,4:13:19.94:143,20,0	0/1:24,2:27:26.79:27,0,248	1/1:6,3:11:22.36:147,22,0	0/1:11,8:18:22.07:182,0,22	1/1:13,7:19:47.28:349,47,0	0/0:16,1:16:6.19:0,6,154	0/0:15,0:15:4.48:0,4,182	0/0:11,0:12:17.65:0,18,146	1/1:16,7:20:9.82:218,10,0	0/0:14,0:14:15.67:0,16,148	0/0:25,0:26:22.43:0,22,260	0/1:17,0:16:8.86:9,0,140	1/1:16,7:20:32.69:229,33,0	1/1:17,11:26:22.15:351,22,0	1/1:6,1:5:2.98:23,3,0	0/0:13,0:13:22.75:0,23,248	0/0:17,0:15:29.08:0,29,226	0/1:12,1:10:13.98:14,0,48	1/1:8,9:15:34.06:278,34,0	1/1:11,11:23:55.81:404,56,0	1/1:8,12:17:13.98:243,14,0	1/1:5,5:7:8.01:52,8,0
chr10	55450431	.	AAG	A	838.10	PASS	AB=0.988;AC=19;AF=0.339;AN=56;BaseQRankSum=6.537;DP=656;FS=8.119;HRun=0;HaplotypeScore=89.3160;InbreedingCoeff=0.2401;MQ=46.61;MQ0=49;MQRankSum=-6.265;QD=2.37;ReadPosRankSum=1.757;VQSLOD=1.0902;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:34:88.59:0,89,1240	0/0:7,0:6:12.09:0,12,71	0/0:83,0:6:14.55:0,15,82	0/1:91,0:13:7.87:8,0,107	0/0:25,0:25:54.10:0,54,661	1/1:10,0:10:18.73:65,19,0	1/1:15,0:14:11.07:56,11,0	0/1:26,0:26:12.08:12,0,425	1/1:10,1:11:10.12:92,10,0	0/1:25,0:24:17.76:18,0,162	1/1:25,0:24:4.93:116,5,0	0/0:18,0:16:28.60:0,29,296	0/0:14,0:14:28.50:0,29,328	0/0:15,0:15:19.16:0,19,328	0/1:24,1:24:77.36:114,0,77	0/0:15,0:15:35.52:0,36,388	0/0:28,0:27:53.15:0,53,665	0/0:18,0:16:36.50:0,36,405	0/1:25,1:21:32.20:91,0,32	0/1:27,1:26:14.92:155,0,15	0/0:4,0:3:2.50:0,2,14	0/0:14,0:14:38.14:0,38,554	0/0:16,0:14:33.01:0,33,425	0/0:10,0:9:9.84:0,10,148	0/1:20,0:18:26.55:42,0,27	1/1:22,0:21:19.44:151,19,0	0/1:20,0:17:24.87:87,0,25	0/1:10,0:7:8.05:13,0,8
chr10	55450434	.	GAA	G	1921.55	PASS	AB=0.897;AC=27;AF=0.482;AN=56;BaseQRankSum=6.695;DP=641;FS=1.019;HRun=15;HaplotypeScore=86.9458;InbreedingCoeff=0.8466;MQ=47.49;MQ0=39;MQRankSum=-3.743;QD=7.48;ReadPosRankSum=-0.289;VQSLOD=0.9583;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:74.82:0,75,868	0/0:1,0:4:4.87:0,5,17	0/0:82,0:7:14.83:0,15,153	0/0:88,0:14:16.36:0,16,119	0/0:25,0:25:24.09:0,24,351	1/1:6,5:11:11.77:97,12,0	1/1:8,7:14:11.91:103,12,0	0/1:23,3:26:64.66:65,0,178	1/1:7,4:11:11.67:91,12,0	1/1:12,10:22:29.74:264,30,0	1/1:14,8:22:16.85:138,17,0	0/0:17,0:16:22.29:0,22,189	0/0:14,0:14:17.92:0,18,179	0/0:15,0:15:20.96:0,21,242	1/1:17,5:22:17.22:136,17,0	0/0:12,0:15:26.48:0,26,270	0/0:27,1:27:24.68:0,25,525	0/0:16,0:16:29.51:0,30,312	1/1:16,3:21:23.29:178,23,0	1/1:20,6:27:29.23:225,29,0	1/1:2,2:3:5.97:53,6,0	0/0:14,0:15:36.08:0,36,443	0/0:15,0:15:32.58:0,33,390	0/0:11,0:10:17.46:0,17,171	1/1:6,12:18:32.57:275,33,0	1/1:11,11:21:29.76:262,30,0	1/1:10,9:16:20.33:228,20,0	1/1:7,2:7:2.83:26,3,0
chr10	55452373	.	G	GT	993.22	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-3.057;DP=721;FS=31.626;HRun=5;HaplotypeScore=66.0604;InbreedingCoeff=0.9913;MQ=77.56;MQ0=0;MQRankSum=-0.984;QD=30.10;ReadPosRankSum=-3.362;VQSLOD=0.8629;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:93.23:0,93,999	1/1:0,5:5:15.05:197,15,0	0/0:15,0:15:35.82:0,36,365	0/0:16,0:16:39.08:0,39,409	0/0:46,0:46:99:0,129,1378	0/0:35,0:35:99:0,99,1055	0/0:24,0:24:69.16:0,69,733	1/1:3,25:28:72.19:914,72,0	0/0:19,0:19:54.14:0,54,580	0/0:36,0:36:99:0,102,1090	0/0:35,0:35:96.23:0,96,1025	0/0:23,0:23:69.16:0,69,734	0/0:19,0:19:57.14:0,57,612	0/0:17,0:17:48.12:0,48,516	0/0:26,0:26:78.18:0,78,830	0/0:19,0:19:51.10:0,51,532	0/0:32,0:32:96.22:0,96,1023	0/0:12,0:12:33.08:0,33,355	0/0:19,0:19:51.13:0,51,548	0/0:41,0:41:99:0,111,1193	0/0:47,0:47:99:0,129,1386	0/0:27,0:27:78.20:0,78,838	0/0:29,0:29:75.18:0,75,806	0/0:22,0:22:60.12:0,60,635	0/0:28,0:28:69.16:0,69,734	0/0:28,0:28:81.20:0,81,870	0/0:30,0:30:84.17:0,84,885	0/0:11,0:11:30.08:0,30,322
chr10	55459618	.	T	TC	316.18	PASS	AB=0.885;AC=3;AF=0.054;AN=56;BaseQRankSum=-4.137;DP=584;FS=3.911;HRun=0;HaplotypeScore=118.9262;InbreedingCoeff=0.1980;MQ=52.43;MQ0=32;MQRankSum=2.928;QD=4.72;ReadPosRankSum=-1.530;VQSLOD=3.0896;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:34:74.41:0,74,533	0/1:10,0:10:1.10:88,0,1	0/0:29,0:7:11.91:0,12,88	0/1:21,0:6:6.52:7,0,56	0/0:21,0:21:41.98:0,42,313	0/0:21,0:20:32.91:0,33,259	0/0:14,0:13:23.95:0,24,192	0/1:17,18:36:57.52:316,0,58	0/0:18,0:18:38.89:0,39,311	0/0:27,0:25:44.81:0,45,367	0/0:16,0:16:35.88:0,36,282	0/0:20,0:19:45.11:0,45,351	0/0:23,0:22:46.40:0,46,364	0/0:13,0:13:31.87:0,32,234	0/0:28,0:27:53.87:0,54,433	0/0:15,0:15:33.11:0,33,285	0/0:36,0:32:62.11:0,62,449	0/0:23,0:19:31.99:0,32,216	0/0:27,0:24:58.99:0,59,493	0/0:20,0:19:44.75:0,45,340	0/0:13,0:11:8.95:0,9,67	0/0:5,0:5:11.95:0,12,95	0/0:15,0:15:31.56:0,32,237	0/0:12,0:11:17.50:0,18,142	0/0:17,0:17:32.92:0,33,264	0/0:30,0:28:68.52:0,69,542	0/0:29,0:27:41.91:0,42,339	0/0:8,0:8:23.94:0,24,201
chr10	55460311	.	CT	C	3938.26	PASS	AB=0.582;AC=45;AF=0.804;AN=56;BaseQRankSum=-0.562;DP=394;FS=6.514;HRun=13;HaplotypeScore=47.5278;InbreedingCoeff=0.5936;MQ=80.74;MQ0=1;MQRankSum=0.571;QD=12.01;ReadPosRankSum=2.326;VQSLOD=3.2710;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:9,19:28:31.76:256,0,32	1/1:1,0:9:10.11:29,10,0	0/0:23,0:15:20.36:0,20,163	0/0:18,0:13:12.99:0,13,90	1/1:4,13:15:35.76:262,36,0	0/1:4,12:16:28.48:145,0,28	1/1:2,5:7:8.94:66,9,0	1/1:15,0:38:37.36:111,37,0	1/1:0,8:8:14.91:109,15,0	1/1:4,10:14:20.75:153,21,0	1/1:3,7:10:17.87:131,18,0	1/1:1,6:7:20.39:140,20,0	0/0:13,0:13:39.04:0,39,370	0/0:11,0:11:30.03:0,30,285	1/1:3,11:14:32.81:241,33,0	1/1:1,9:10:20.87:153,21,0	1/1:2,14:16:35.79:263,36,0	0/1:7,19:26:1.67:315,0,2	1/1:4,13:18:39.63:273,40,0	1/1:1,13:14:38.76:282,39,0	1/1:1,5:6:14.91:109,15,0	1/1:0,4:4:8.93:66,9,0	1/1:2,8:10:20.87:153,21,0	1/1:0,3:3:5.97:44,6,0	1/1:2,11:13:26.81:197,27,0	1/1:8,11:19:2.75:187,3,0	1/1:4,11:17:27.92:186,28,0	1/1:1,3:4:8.94:66,9,0
chr10	55464122	.	C	CTCTA	2226.43	PASS	AC=22;AF=0.423;AN=52;BaseQRankSum=0.781;DP=672;FS=2.845;HRun=0;HaplotypeScore=123.7564;InbreedingCoeff=0.8959;MQ=66.73;MQ0=2;MQRankSum=-4.616;QD=8.56;ReadPosRankSum=-4.298;VQSLOD=1.6813;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:13,1:21:6.02:110,6,0	1/1:5,0:11:3:27,3,0	./.	./.	1/1:20,0:45:10.43:92,10,0	0/0:38,0:37:69.23:0,69,1065	0/0:17,0:17:18.04:0,18,258	1/1:37,0:36:14.97:144,15,0	0/0:18,0:19:39.12:0,39,584	0/0:37,0:38:69.18:0,69,952	0/0:30,0:30:42.13:0,42,628	1/1:9,12:21:18.06:415,18,0	0/0:26,0:26:39.11:0,39,577	0/0:18,0:18:27.08:0,27,400	0/0:28,0:28:51.17:0,51,791	1/1:18,2:34:24.08:417,24,0	1/1:17,1:18:8.93:105,9,0	1/1:8,1:14:6.02:123,6,0	0/0:21,0:20:21.05:0,21,305	0/0:18,0:19:30.10:0,30,447	0/0:35,0:35:60.20:0,60,930	1/1:13,14:27:27.09:633,27,0	1/1:5,9:15:6.02:126,6,0	1/1:10,3:15:12.04:237,12,0	0/0:15,0:15:27.09:0,27,420	0/0:32,0:32:41.07:0,41,913	0/0:33,0:34:42.14:0,42,631	0/0:12,0:12:15.05:0,15,234
chr10	55464496	.	T	TTCTA	11327.02	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=2.988;DP=663;FS=10.186;HRun=0;HaplotypeScore=213.8902;InbreedingCoeff=0.8079;MQ=56.62;MQ0=5;MQRankSum=-2.885;QD=19.26;ReadPosRankSum=-1.273;VQSLOD=3.1122;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:25,5:30:14.94:612,15,0	1/1:6,0:6:17.76:121,18,0	0/0:22,0:16:5.88:0,6,37	0/0:8,0:7:8.67:0,9,61	1/1:10,22:32:5.39:765,5,0	1/1:25,0:25:38.70:338,39,0	1/1:6,0:5:3:25,3,0	1/1:50,0:50:71.41:525,71,0	1/1:31,0:30:41.86:513,42,0	1/1:36,0:36:83.77:1009,84,0	1/1:28,0:26:14.95:161,15,0	1/1:4,10:14:15.05:362,15,0	0/0:23,0:23:47.81:0,48,603	0/0:22,0:22:51.05:0,51,699	1/1:30,0:29:39:511,39,0	1/1:4,22:28:36.59:869,37,0	1/1:3,16:19:33.11:795,33,0	1/1:2,9:11:12.04:289,12,0	1/1:19,0:18:17.98:223,18,0	1/1:30,0:28:24.01:301,24,0	1/1:11,0:12:3.43:20,3,0	1/1:2,13:15:24.01:507,24,0	1/1:3,12:15:21.07:501,21,0	1/1:5,11:16:15.05:361,15,0	1/1:42,0:42:42.30:562,42,0	1/1:38,0:38:80.86:971,81,0	1/1:35,0:35:53.70:551,54,0	1/1:19,0:19:38.92:435,39,0
chr10	55464636	.	TAC	T	585.09	PASS	AB=0.970;AC=17;AF=0.340;AN=50;BaseQRankSum=4.816;DP=437;FS=5.585;HRun=0;HaplotypeScore=61.1095;InbreedingCoeff=0.3725;MQ=58.39;MQ0=14;MQRankSum=0.169;QD=3.03;ReadPosRankSum=-0.090;VQSLOD=0.9228;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:36,2:37:27.65:246,28,0	0/0:4,0:4:9.03:0,9,129	./.	./.	1/1:7,1:10:10.72:66,11,0	0/0:17,0:17:6.01:0,6,68	0/1:15,1:14:26.22:26,0,38	./.	0/1:17,1:15:18.13:18,0,156	0/0:14,0:14:12.01:0,12,149	0/0:6,0:6:9.03:0,9,131	0/1:10,0:10:7.14:7,0,79	0/1:10,0:10:33.28:33,0,97	0/0:12,0:12:10.87:0,11,154	0/0:15,0:15:12.01:0,12,138	1/1:13,0:18:8.99:43,9,0	1/1:17,5:22:17.71:156,18,0	1/1:11,2:12:8.75:76,9,0	0/0:13,0:12:4.25:0,4,29	0/0:6,0:7:9.01:0,9,93	0/0:37,0:36:20.77:0,21,284	0/0:9,0:9:3.01:0,3,43	0/0:8,0:8:6.02:0,6,88	0/1:24,1:25:7.39:7,0,197	1/1:7,1:11:11.53:74,12,0	0/0:14,0:14:6.46:0,6,66	0/0:20,0:20:3.01:0,3,44	0/0:6,0:6:5.98:0,6,47
chr10	55465381	.	CT	C	5525.52	PASS	AB=0.878;AC=33;AF=0.589;AN=56;BaseQRankSum=6.660;DP=532;FS=4.207;HRun=11;HaplotypeScore=58.5500;InbreedingCoeff=0.7918;MQ=68.67;MQ0=0;MQRankSum=0.957;QD=16.30;ReadPosRankSum=2.680;VQSLOD=5.8979;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,2:21:7.95:0,8,481	1/1:1,7:8:17.97:148,18,0	0/0:14,0:14:3.73:0,4,242	0/1:9,1:10:0.26:0,0,176	0/0:31,0:31:81.65:0,82,848	1/1:2,18:20:53.92:443,54,0	1/1:2,11:13:29.96:246,30,0	1/1:5,16:21:47.93:394,48,0	1/1:3,18:21:50.93:419,51,0	1/1:4,20:24:56.88:464,57,0	1/1:4,21:25:24.95:411,25,0	0/0:19,0:19:36.08:0,36,377	0/0:23,1:25:35.34:0,35,555	0/0:17,1:19:16.60:0,17,384	1/1:4,15:20:32.38:379,32,0	0/1:13,3:16:31.84:32,0,303	0/0:11,2:14:11.02:0,11,289	0/0:20,0:20:57.14:0,57,607	1/1:5,12:17:35.93:293,36,0	1/1:3,17:20:38.92:320,39,0	1/1:3,11:14:29.94:246,30,0	0/0:13,0:14:31.88:0,32,319	0/0:15,0:16:32.92:0,33,334	0/1:13,2:15:4.18:4,0,370	1/1:4,19:24:29.34:423,29,0	1/1:4,20:24:29.36:435,29,0	1/1:3,34:37:92.88:764,93,0	1/1:4,5:10:14.01:104,14,0
chr10	55465738	.	GGTGTGT	G	1585.96	PASS	AB=0.813;AC=23;AF=0.479;AN=48;BaseQRankSum=4.364;DP=647;FS=2.671;HRun=0;HaplotypeScore=136.2784;InbreedingCoeff=0.7090;MQ=70.56;MQ0=30;MQRankSum=-5.060;QD=6.10;ReadPosRankSum=-0.525;VQSLOD=2.2844;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:21.04:0,21,473	0/0:5,0:9:15.05:0,15,423	./.	0/0:38,0:27:2.68:0,3,11	0/0:14,0:15:15.05:0,15,426	1/1:11,0:11:0.89:2,1,0	1/1:27,6:31:18.02:293,18,0	0/0:38,0:36:17.98:0,18,322	1/1:18,4:21:6.02:122,6,0	./.	1/1:11,5:17:5.98:80,6,0	0/0:20,0:22:11.76:0,12,164	0/0:27,0:27:21.03:0,21,366	0/0:30,0:34:27.54:0,28,536	1/1:30,11:40:27.06:489,27,0	0/1:20,0:25:26.89:27,0,197	0/0:24,0:31:40.46:0,40,505	0/0:17,0:19:18.04:0,18,213	./.	1/1:11,3:14:9.03:164,9,0	1/1:35,0:34:6.01:84,6,0	0/0:10,0:15:9.03:0,9,119	./.	0/0:28,0:34:35.59:0,36,463	1/1:6,3:9:3.01:61,3,0	1/1:17,4:19:12.89:157,13,0	1/1:17,1:17:3.01:42,3,0	1/1:4,4:8:12.04:244,12,0
chr10	55466554	.	TAC	T	1003.58	PASS	AB=0.935;AC=33;AF=0.717;AN=46;BaseQRankSum=1.900;DP=517;FS=5.524;HRun=0;HaplotypeScore=75.6449;InbreedingCoeff=0.2245;MQ=58.73;MQ0=17;MQRankSum=-1.314;QD=2.93;ReadPosRankSum=1.945;VQSLOD=0.8824;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:2.99:0,3,24	0/0:7,0:7:2.99:0,3,24	./.	./.	0/0:12,0:20:2.99:0,3,24	1/1:20,0:20:20.96:175,21,0	0/1:13,8:21:0:0,0,1	./.	1/1:7,13:20:12.70:156,13,0	1/1:19,0:19:11.94:95,12,0	./.	1/1:12,0:21:4.09:17,4,0	0/1:15,0:14:8.07:8,0,49	0/1:19,1:20:6.92:7,0,170	1/1:12,8:20:3.01:32,3,0	1/1:13,0:13:12.39:155,12,0	0/0:12,0:21:0:0,0,1	1/1:19,1:19:11.29:65,11,0	1/1:21,0:20:8.46:49,8,0	0/1:14,0:14:33.97:34,0,73	0/1:24,0:23:16.40:55,0,16	./.	1/1:5,0:9:5.68:28,6,0	1/1:17,0:18:11.28:54,11,0	1/1:15,7:22:3.22:13,3,0	1/1:19,0:24:15.03:77,15,0	1/1:9,7:15:5.81:64,6,0	1/1:3,0:3:5.98:49,6,0
chr10	55466792	.	G	GGGCAGA	4732.71	PASS	AB=1.000;AC=29;AF=0.537;AN=54;BaseQRankSum=-2.148;DP=557;FS=7.891;HRun=0;HaplotypeScore=116.9236;InbreedingCoeff=0.7269;MQ=67.81;MQ0=8;MQRankSum=-9.316;QD=17.46;ReadPosRankSum=-3.403;VQSLOD=2.9100;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:55.26:0,55,861	1/1:6,0:7:9.03:265,9,0	0/0:23,0:16:3.01:0,3,56	0/0:13,0:10:12.03:0,12,191	0/0:27,0:27:33.57:0,34,585	1/1:12,5:17:3.01:97,3,0	1/1:19,5:24:15.52:439,16,0	1/1:19,0:19:3:26,3,0	1/1:10,7:16:21.07:679,21,0	1/1:19,2:22:12.02:266,12,0	./.	0/0:20,0:20:33.10:0,33,590	0/0:19,0:19:36.04:0,36,554	0/0:23,0:23:38.97:0,39,608	1/1:10,10:21:30.10:923,30,0	0/0:24,0:24:57.19:0,57,1100	0/1:26,0:26:19.47:19,0,917	0/0:31,0:30:28.23:0,28,843	1/1:18,0:18:10.28:171,10,0	1/1:16,4:20:9.03:291,9,0	1/1:17,0:16:2.99:24,3,0	0/0:11,0:10:18.03:0,18,281	0/0:13,0:13:5.99:0,6,83	0/0:34,0:33:65.23:0,65,1207	1/1:10,5:14:3.90:99,4,0	1/1:13,4:15:12.04:389,12,0	1/1:18,10:27:33.11:1020,33,0	1/1:1,0:1:2.99:24,3,0
chr10	55468215	.	G	GT	9867.67	PASS	AB=1.000;AC=27;AF=0.482;AN=56;BaseQRankSum=3.503;DP=642;FS=9.805;HRun=6;HaplotypeScore=84.9502;InbreedingCoeff=0.9521;MQ=70.54;MQ0=0;MQRankSum=1.881;QD=31.13;ReadPosRankSum=3.588;VQSLOD=4.8293;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,117,1174	0/0:7,0:7:15.03:0,15,153	0/0:16,0:15:37.79:0,38,342	0/1:11,0:10:2.46:2,0,56	0/0:28,0:28:75.12:0,75,748	1/1:2,20:22:54.17:675,54,0	1/1:0,18:18:48.15:604,48,0	0/0:26,0:26:66.12:0,66,663	1/1:1,17:18:51.16:642,51,0	1/1:6,27:33:81.26:1016,81,0	1/1:6,17:23:48.15:598,48,0	0/0:20,0:20:57.12:0,57,580	0/0:25,0:25:69.13:0,69,696	0/0:28,0:28:81.17:0,81,818	1/1:2,25:27:66.21:830,66,0	0/0:19,0:19:54.11:0,54,544	0/0:28,0:28:72.16:0,72,733	0/0:14,0:14:36.07:0,36,366	1/1:4,27:31:81.24:993,81,0	1/1:2,16:18:39.12:485,39,0	1/1:3,16:19:48.15:604,48,0	0/0:26,0:26:69.15:0,69,699	0/0:17,0:17:45.10:0,45,459	0/0:27,0:27:63.03:0,63,628	1/1:0,23:23:66.21:826,66,0	1/1:1,23:25:72.23:895,72,0	1/1:2,21:23:63.20:793,63,0	1/1:3,23:26:72.23:905,72,0
chr10	55470954	.	TTTG	T	9688.30	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=13.764;DP=736;FS=4.431;HRun=0;HaplotypeScore=108.4576;InbreedingCoeff=0.9932;MQ=69.28;MQ0=2;MQRankSum=2.282;QD=26.76;ReadPosRankSum=2.439;VQSLOD=4.5735;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,99,1961	1/1:0,7:7:18.06:253,18,0	0/0:32,0:28:39.13:0,39,754	0/0:25,0:23:38.85:0,39,649	0/0:33,0:33:72.24:0,72,1409	1/1:2,30:32:72.24:1012,72,0	1/1:11,14:25:39.13:548,39,0	1/1:15,16:31:51.15:679,51,0	1/1:7,12:19:30.10:422,30,0	1/1:9,14:23:45.15:629,45,0	1/1:10,17:27:54.09:712,54,0	0/0:25,2:27:15.05:0,15,1035	0/0:27,0:27:54.19:0,54,1077	0/0:26,0:26:66.21:0,66,1282	1/1:3,19:22:54.18:759,54,0	0/0:23,0:23:48.16:0,48,960	0/0:27,0:27:57.12:0,57,1038	0/0:42,1:43:30.10:0,30,1322	1/1:7,5:12:15.05:211,15,0	1/1:10,25:35:72.21:990,72,0	1/1:7,18:25:39.13:548,39,0	0/0:19,0:19:36.11:0,36,687	0/0:20,0:20:39.13:0,39,759	0/0:27,0:27:60.21:0,60,1164	1/1:6,18:24:42.14:590,42,0	1/1:10,30:40:90.28:1240,90,0	1/1:5,22:27:60.20:843,60,0	1/1:3,10:13:18.06:253,18,0
chr10	55472545	.	G	GA	5068.33	PASS	AB=0.778;AC=26;AF=0.464;AN=56;BaseQRankSum=-7.844;DP=489;FS=0.000;HRun=10;HaplotypeScore=54.1651;InbreedingCoeff=0.6776;MQ=66.11;MQ0=0;MQRankSum=1.525;QD=19.95;ReadPosRankSum=0.177;VQSLOD=5.3679;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,1:25:15.88:0,16,333	0/0:7,0:7:17.98:0,18,148	0/1:6,0:6:15.34:15,0,16	0/0:6,0:6:1.91:0,2,53	0/0:29,1:31:50.68:0,51,600	1/1:3,13:17:7.60:321,8,0	1/1:2,14:16:14.45:359,14,0	0/0:29,0:32:80.74:0,81,626	1/1:0,15:16:39.10:416,39,0	1/1:5,21:27:45.25:663,45,0	0/1:10,9:21:50.54:294,0,51	0/0:9,0:9:26.95:0,27,218	0/0:10,0:10:26.97:0,27,222	0/0:20,0:21:52.83:0,53,413	1/1:4,5:10:20.72:188,21,0	0/0:14,1:15:9.96:0,10,288	0/0:28,0:28:50.29:0,50,541	0/0:15,0:15:44.87:0,45,359	1/1:6,12:18:17.46:391,17,0	1/1:7,24:31:44.47:667,44,0	0/1:3,7:10:6.60:142,0,7	0/0:20,0:20:31.20:0,31,371	0/0:16,0:16:41.92:0,42,342	0/1:11,2:13:5.05:5,0,166	1/1:3,21:25:41.35:624,41,0	1/1:3,14:17:36.08:376,36,0	1/1:5,12:17:33.08:352,33,0	1/1:2,8:10:5.42:256,5,0
chr10	55472608	.	C	CT	2581.35	PASS	AB=0.868;AC=31;AF=0.554;AN=56;BaseQRankSum=-0.545;DP=506;FS=2.750;HRun=15;HaplotypeScore=75.2311;InbreedingCoeff=0.4554;MQ=68.37;MQ0=4;MQRankSum=-0.570;QD=7.48;ReadPosRankSum=-2.247;VQSLOD=2.3484;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,1:31:35.36:0,35,317	1/1:2,1:11:20.04:110,20,0	0/1:22,0:15:4.68:5,0,14	0/1:19,0:14:12.80:13,0,44	0/1:25,3:28:18.93:19,0,99	1/1:6,5:12:23.65:176,24,0	1/1:11,2:14:17.74:129,18,0	1/1:18,1:28:28.99:172,29,0	1/1:5,8:13:26.96:224,27,0	0/1:16,5:21:1.91:167,0,2	1/1:10,7:17:20.88:167,21,0	0/1:6,1:7:13.49:13,0,40	0/0:15,0:15:17.35:0,17,107	0/0:14,0:15:24.60:0,25,146	1/1:6,9:17:32.58:247,33,0	0/0:17,0:18:28.27:0,28,166	0/0:26,0:28:60.27:0,60,362	0/0:19,0:21:27.34:0,27,155	1/1:8,1:10:17.54:117,18,0	1/1:9,10:20:17.72:240,18,0	0/1:5,0:5:0:0,0,0	0/0:17,0:17:20.20:0,20,122	0/0:16,0:16:17.35:0,17,106	0/1:10,2:12:23.30:23,0,99	1/1:11,11:21:47.76:379,48,0	1/1:11,9:20:2.39:213,2,0	0/1:15,5:20:6.07:168,0,6	0/1:5,15:20:3.03:194,0,3
chr10	55474524	.	A	AAG	15454.14	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-16.932;DP=628;FS=1.743;HRun=0;HaplotypeScore=67.2687;InbreedingCoeff=0.9993;MQ=82.61;MQ0=3;MQRankSum=-0.211;QD=43.41;ReadPosRankSum=0.946;VQSLOD=6.3200;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:90.30:0,90,1218	1/1:0,10:12:24.08:421,24,0	0/0:15,0:15:36.10:0,36,454	0/0:24,0:24:55.92:0,56,646	0/0:28,0:28:84.28:0,84,1136	1/1:2,28:31:81.28:1420,81,0	1/1:3,16:19:42.14:736,42,0	1/1:5,28:34:90.28:1517,90,0	1/1:2,22:25:66.22:1140,66,0	1/1:2,23:25:69.22:1142,69,0	1/1:0,16:16:42.14:729,42,0	0/0:20,0:20:57.18:0,57,755	0/0:24,0:24:72.18:0,72,937	0/0:18,0:18:54.18:0,54,729	1/1:2,33:35:90.31:1578,90,0	0/0:24,0:24:69.23:0,69,933	0/0:22,0:22:63.17:0,63,818	0/0:13,0:13:33.11:0,33,446	1/1:5,7:13:24.08:408,24,0	1/1:1,26:28:72.25:1262,72,0	1/1:2,23:27:69.24:1210,69,0	0/0:20,0:20:60.18:0,60,781	0/0:16,0:16:39.13:0,39,524	0/0:16,0:16:45.15:0,45,609	1/1:2,22:21:54.19:947,54,0	1/1:6,18:24:54.18:947,54,0	1/1:2,28:32:84.29:1471,84,0	1/1:0,11:11:30.10:526,30,0
chr10	55476713	.	T	TAC	11251.27	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-9.300;DP=501;FS=2.189;HRun=0;HaplotypeScore=66.6837;InbreedingCoeff=0.9888;MQ=82.68;MQ0=0;MQRankSum=-5.419;QD=44.12;ReadPosRankSum=-0.501;VQSLOD=5.5509;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:93.23:0,93,1220	1/1:1,3:4:9.03:160,9,0	0/0:22,0:22:57.19:0,57,783	0/0:12,0:12:33.11:0,33,445	0/0:21,0:21:51.17:0,51,701	1/1:4,16:20:45.15:797,45,0	1/1:1,11:12:30.10:532,30,0	1/1:4,37:41:99:1840,111,0	1/1:0,13:13:39.13:691,39,0	1/1:5,20:25:66.23:1155,66,0	1/1:2,14:16:24.08:418,24,0	0/0:17,0:17:48.16:0,48,659	0/0:19,0:19:54.18:0,54,742	0/0:22,0:22:63.20:0,63,849	1/1:3,11:14:36.12:615,36,0	0/0:18,0:18:51.16:0,51,684	0/0:22,0:22:63.21:0,63,858	0/0:21,0:21:60.13:0,60,784	1/1:2,12:14:42.14:742,42,0	1/1:3,19:22:57.18:973,57,0	1/1:2,8:10:15.05:266,15,0	0/0:9,0:9:24.08:0,24,329	0/0:18,0:18:48.16:0,48,659	0/0:13,0:13:39.13:0,39,535	1/1:3,9:12:30.09:497,30,0	1/1:4,19:22:63.20:1084,63,0	1/1:5,16:21:63.18:1056,63,0	1/1:0,8:8:24.08:425,24,0
chr10	55476772	.	AAC	A	8693.80	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=13.862;DP=508;FS=2.941;HRun=0;HaplotypeScore=76.2419;InbreedingCoeff=0.9889;MQ=78.35;MQ0=2;MQRankSum=-4.277;QD=37.80;ReadPosRankSum=3.416;VQSLOD=7.2235;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:86.98:0,87,1488	0/0:4,0:4:12.04:0,12,207	0/0:25,0:21:43.60:0,44,606	0/0:10,0:11:17.76:0,18,179	0/0:32,0:32:96.23:0,96,1541	1/1:0,24:24:60.20:868,60,0	1/1:1,8:9:18.02:233,18,0	0/0:28,0:27:75.20:0,75,1219	1/1:0,11:11:30.10:434,30,0	1/1:1,23:24:71.54:917,72,0	1/1:0,22:22:66.18:929,66,0	0/0:10,0:10:30.10:0,30,507	0/0:14,0:14:42.12:0,42,671	0/0:21,0:21:63.09:0,63,916	1/1:0,15:15:36.12:521,36,0	0/0:22,0:22:66.20:0,66,1085	0/0:12,0:12:36.09:0,36,555	0/0:20,0:20:60.05:0,60,913	1/1:1,20:20:54.01:760,54,0	1/1:0,28:28:84.14:1143,84,0	1/1:0,5:5:12.04:174,12,0	0/0:16,0:16:45.12:0,45,709	0/0:17,0:17:49.02:0,49,775	0/0:15,0:15:45.07:0,45,639	1/1:0,16:15:39.13:564,39,0	1/1:0,20:20:57.18:807,57,0	1/1:0,26:26:66.22:955,66,0	1/1:0,9:9:27.09:391,27,0
chr10	55479699	.	C	CT	1437.37	PASS	AB=0.770;AC=27;AF=0.482;AN=56;BaseQRankSum=-3.235;DP=330;FS=1.219;HRun=14;HaplotypeScore=47.6222;InbreedingCoeff=0.5726;MQ=74.64;MQ0=9;MQRankSum=-1.504;QD=7.08;ReadPosRankSum=-1.109;VQSLOD=1.7022;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:16:7.86:0,8,131	1/1:0,2:2:3:27,3,0	0/0:11,0:11:16.07:0,16,88	0/0:10,0:9:2.15:0,2,12	0/0:20,0:20:24.42:0,24,145	0/1:7,9:16:27.74:155,0,28	0/1:7,1:10:4.49:67,0,4	1/1:16,10:25:9.03:165,9,0	1/1:3,4:9:13.24:85,13,0	1/1:11,8:19:21.27:160,21,0	1/1:6,5:11:14.51:92,15,0	0/0:6,0:5:11.82:0,12,77	0/0:7,0:7:14.72:0,15,93	0/0:6,0:6:11.80:0,12,77	1/1:1,7:8:9:79,9,0	0/0:10,0:10:14.67:0,15,92	0/0:20,0:17:8.97:0,9,184	0/1:6,1:8:17.77:18,0,79	1/1:6,7:11:14.96:123,15,0	1/1:4,2:6:5.87:42,6,0	0/1:3,0:3:0:0,0,0	0/0:7,0:7:14.72:0,15,93	0/0:8,0:8:11.76:0,12,76	0/0:4,0:4:5.89:0,6,38	1/1:9,4:15:8.52:111,9,0	1/1:12,11:23:21.51:192,22,0	0/1:4,5:10:4.41:71,0,4	1/1:10,11:22:12.88:245,13,0
chr10	55481573	.	TA	T	4324.78	PASS	AB=1.000;AC=31;AF=0.554;AN=56;BaseQRankSum=8.748;DP=466;FS=21.489;HRun=12;HaplotypeScore=51.7786;InbreedingCoeff=0.9041;MQ=60.02;MQ0=4;MQRankSum=-0.513;QD=15.61;ReadPosRankSum=0.890;VQSLOD=3.6981;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,2:27:22.63:0,23,576	1/1:0,11:11:29.88:232,30,0	0/1:6,0:4:0.40:0,0,20	0/0:2,0:2:6.01:0,6,55	0/0:22,0:25:47.80:0,48,436	1/1:4,16:20:20.35:341,20,0	1/1:4,5:8:5.95:46,6,0	1/1:10,13:22:35.78:277,36,0	1/1:2,10:12:23.90:185,24,0	1/1:7,14:21:40.85:308,41,0	1/1:6,13:20:40.81:305,41,0	0/0:16,0:16:30.03:0,30,304	0/0:12,0:12:32.97:0,33,316	0/0:15,1:16:12.83:0,13,312	1/1:4,14:18:35.84:279,36,0	0/0:21,1:22:24.77:0,25,415	0/0:32,0:32:78.11:0,78,772	0/0:19,0:20:44.83:0,45,423	1/1:4,10:15:28.83:206,29,0	1/1:4,22:25:68.70:528,69,0	1/1:2,8:9:17.91:139,18,0	0/0:4,0:4:9:0,9,85	0/0:5,0:5:12.01:0,12,117	0/0:8,0:7:18.02:0,18,175	1/1:2,12:14:8.41:248,8,0	1/1:8,25:33:68.65:534,69,0	1/1:6,22:28:62.73:487,63,0	1/1:1,9:10:26.89:209,27,0
chr10	55482969	.	A	AC	1247	PASS	AB=1.000;AC=27;AF=0.500;AN=54;BaseQRankSum=2.811;DP=317;FS=2.047;HRun=2;HaplotypeScore=49.8046;InbreedingCoeff=0.7742;MQ=54.33;MQ0=61;MQRankSum=-4.047;QD=9.17;ReadPosRankSum=0.519;VQSLOD=1.2781;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:21:51.30:0,51,424	1/1:2,0:1:0.89:2,1,0	./.	0/0:14,0:9:5.75:0,6,32	0/0:18,0:14:28.15:0,28,284	1/1:8,1:6:16.61:143,17,0	1/1:4,1:5:11.69:114,12,0	0/0:8,0:4:5.63:0,6,40	1/1:3,2:4:7.84:84,8,0	1/1:11,1:7:13.52:138,14,0	1/1:11,2:11:5.55:109,6,0	0/0:10,0:6:8.98:0,9,78	0/0:7,0:5:11.24:0,11,100	0/0:8,0:7:13.95:0,14,98	1/1:11,0:8:22.26:149,22,0	0/0:16,0:14:20.93:0,21,182	0/0:26,0:23:50.45:0,50,444	0/0:11,0:9:20.91:0,21,175	0/1:12,0:9:3.36:105,0,3	1/1:8,1:9:12.51:123,13,0	1/1:6,1:6:11.49:99,11,0	0/0:12,0:9:11.75:0,12,94	0/0:11,0:9:20.85:0,21,171	0/0:10,0:7:9.82:0,10,94	1/1:10,0:8:11.39:78,11,0	1/1:16,0:12:17.85:186,18,0	1/1:13,0:10:6.93:76,7,0	1/1:6,6:7:3.01:42,3,0
chr10	55482971	.	C	CCA	1770.26	PASS	AB=0.810;AC=25;AF=0.446;AN=56;BaseQRankSum=-0.036;DP=337;FS=0.609;HRun=0;HaplotypeScore=59.3504;InbreedingCoeff=0.5993;MQ=55.53;MQ0=60;MQRankSum=-3.849;QD=11.13;ReadPosRankSum=0.068;VQSLOD=3.2707;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:22:56.06:0,56,550	0/0:1,0:1:0.89:0,1,2	0/1:10,0:1:0:0,0,0	0/0:18,0:10:6.33:0,6,40	0/0:14,0:16:34.87:0,35,372	1/1:3,5:7:18.01:220,18,0	0/1:4,2:6:0.96:129,0,1	0/1:7,0:5:12.25:12,0,31	1/1:4,0:3:5.99:48,6,0	1/1:11,2:8:14.51:144,15,0	0/1:6,6:11:1.15:155,0,1	0/0:9,0:5:9:0,9,84	0/0:7,0:5:8.85:0,9,107	0/0:10,0:9:9.24:0,9,92	1/1:7,2:8:22.07:205,22,0	0/0:13,0:14:29.62:0,30,238	0/0:22,0:24:42.84:0,43,535	0/0:10,0:9:20.89:0,21,179	1/1:8,7:11:7.50:204,8,0	0/1:8,1:10:10.31:121,0,10	1/1:2,5:6:11.96:136,12,0	0/0:12,0:9:11.89:0,12,115	0/0:10,0:10:24.03:0,24,250	0/0:9,0:7:14.57:0,15,143	1/1:3,5:7:4.57:107,5,0	1/1:7,7:14:5.85:277,6,0	1/1:3,9:12:14.58:172,15,0	1/1:10,0:6:3:26,3,0
chr10	55484023	.	TATC	T	2648.63	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=1.995;DP=493;FS=0.000;HRun=0;HaplotypeScore=110.4270;InbreedingCoeff=0.9232;MQ=68.97;MQ0=22;MQRankSum=-7.116;QD=12.49;ReadPosRankSum=-2.466;VQSLOD=2.6696;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:21:11.96:0,12,146	1/1:5,0:4:11.98:98,12,0	0/0:51,0:13:38.93:0,39,360	0/0:66,0:24:63.41:0,63,530	0/0:11,0:11:20.96:0,21,170	1/1:10,0:10:14.62:85,15,0	1/1:18,0:18:41.82:279,42,0	1/1:12,0:12:29.81:229,30,0	0/1:14,0:14:4.04:129,0,4	1/1:18,0:14:38.77:304,39,0	1/1:14,0:11:26.87:214,27,0	0/0:12,0:12:29.38:0,29,232	0/0:18,0:18:46.90:0,47,367	0/0:13,0:13:26.29:0,26,215	1/1:20,0:20:18.82:195,19,0	0/0:11,0:11:17.84:0,18,163	0/0:15,0:15:31.69:0,32,230	0/0:21,0:21:53.39:0,53,484	1/1:3,8:11:23.78:171,24,0	1/1:15,0:13:29.80:229,30,0	1/1:24,0:23:29.80:222,30,0	0/0:13,0:12:26.90:0,27,214	0/0:8,0:8:14.97:0,15,123	0/0:20,0:20:34.93:0,35,285	1/1:16,0:14:35.82:283,36,0	1/1:11,0:10:23.71:162,24,0	1/1:19,0:19:32.51:215,33,0	1/1:5,0:3:8.89:62,9,0
chr10	55484517	.	GACACACACACACACAC	G	2760.59	PASS	AC=36;AF=0.783;AN=46;BaseQRankSum=2.023;DP=468;FS=6.287;HRun=0;HaplotypeScore=187.8182;InbreedingCoeff=0.3465;MQ=70.63;MQ0=20;MQRankSum=-0.221;QD=8.32;ReadPosRankSum=0.812;VQSLOD=2.3217;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:27:3:112,3,0	0/0:6,0:6:2.04:0,2,6	./.	./.	1/1:13,0:13:3:26,3,0	1/1:19,5:24:5.91:145,6,0	1/1:12,0:12:2.27:46,2,0	0/0:14,0:14:1.55:0,2,4	./.	1/1:14,2:16:6.02:113,6,0	1/1:14,2:16:3.48:122,3,0	1/1:16,3:20:12.03:501,12,0	0/0:7,0:7:6.02:0,6,378	0/0:10,0:9:6.02:0,6,313	1/1:12,1:13:6.02:241,6,0	1/1:15,0:15:6.02:143,6,0	1/1:23,1:23:2.75:129,3,0	1/1:15,0:13:3.01:84,3,0	1/1:12,2:14:2.91:43,3,0	./.	1/1:21,0:20:2.96:20,3,0	1/1:20,1:22:9.03:352,9,0	0/0:11,0:11:2.84:0,3,10	1/1:13,1:13:6.02:161,6,0	1/1:17,0:17:6.02:113,6,0	1/1:22,0:24:1.87:27,2,0	1/1:13,4:18:12.04:501,12,0	./.
chr10	55485284	.	G	GGTTTGTTT	2532.32	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=4.175;DP=458;FS=20.263;HRun=0;HaplotypeScore=153.1952;InbreedingCoeff=0.2032;MQ=56.88;MQ0=6;MQRankSum=-8.470;QD=15.83;ReadPosRankSum=-4.776;VQSLOD=-0.6444;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:66.38:0,66,748	1/1:1,5:7:6.02:157,6,0	0/0:26,0:14:20.01:0,20,335	0/0:37,0:19:37.29:0,37,480	0/1:28,0:28:99:108,0,684	0/1:7,0:7:50.62:51,0,64	0/1:9,0:9:19.78:184,0,20	1/1:20,0:20:57.18:812,57,0	0/1:13,0:12:99:99,0,117	0/1:14,0:14:49.52:257,0,50	0/1:7,0:7:15.82:48,0,16	0/0:25,0:25:72.18:0,72,1393	0/0:25,0:25:69.22:0,69,1323	0/0:19,0:19:57.18:0,57,1100	0/1:10,0:10:15.38:162,0,15	0/0:14,0:13:33.46:0,33,393	0/0:21,0:21:48.15:0,48,1088	0/0:18,0:18:51.14:0,51,1004	1/1:21,0:20:15.39:463,15,0	0/0:9,0:9:17.95:0,18,116	1/1:6,0:6:9.03:103,9,0	0/0:18,0:18:51.13:0,51,1053	0/0:15,0:15:39.13:0,39,864	0/0:29,0:28:69.22:0,69,1570	0/1:7,0:7:28.71:75,0,29	0/1:11,0:11:48.21:192,0,48	0/0:6,0:6:17.02:0,17,127	0/0:5,0:4:11.88:0,12,81
chr10	55485285	.	GTTTC	G	2012.70	PASS	AB=0.969;AC=27;AF=0.519;AN=52;BaseQRankSum=9.123;DP=461;FS=19.181;HRun=0;HaplotypeScore=118.3553;InbreedingCoeff=0.7017;MQ=56.52;MQ0=6;MQRankSum=-8.874;QD=11.12;ReadPosRankSum=-2.741;VQSLOD=1.2332;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:33:39.96:0,40,613	0/0:7,0:7:6.82:0,7,44	./.	./.	0/0:29,0:34:45.57:0,46,761	1/1:3,4:7:12.04:185,12,0	1/1:5,3:8:11.91:131,12,0	0/0:20,0:20:20.84:0,21,151	1/1:6,7:12:20.10:323,20,0	1/1:10,4:14:12.04:186,12,0	1/1:5,2:7:5.53:92,6,0	0/0:24,0:24:39.13:0,39,906	0/1:24,0:24:16.28:16,0,541	0/0:19,0:19:21.06:0,21,428	1/1:5,3:8:8.42:109,8,0	0/0:11,0:17:18.06:0,18,341	0/1:22,1:23:1.23:1,0,895	0/1:18,1:19:10.29:10,0,685	1/1:19,2:19:8.99:113,9,0	1/1:0,9:9:21.07:317,21,0	0/0:4,1:5:0:0,0,0	0/0:18,0:18:27.09:0,27,612	0/0:14,0:14:24.08:0,24,563	0/0:27,0:26:42.14:0,42,975	1/1:3,2:6:11.48:121,11,0	1/1:7,4:11:12.04:185,12,0	1/1:1,5:6:15.05:232,15,0	1/1:1,4:4:12.04:185,12,0
chr10	55487163	.	TTGTGTGTGTGTG	T	3978.72	PASS	AB=0.727;AC=22;AF=0.407;AN=54;BaseQRankSum=5.967;DP=476;FS=2.914;HRun=0;HaplotypeScore=146.8915;InbreedingCoeff=0.3760;MQ=73.12;MQ0=13;MQRankSum=-5.547;QD=16.44;ReadPosRankSum=1.281;VQSLOD=2.8160;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:28:16.18:0,16,407	0/0:9,0:9:19.46:0,19,692	./.	0/0:26,0:19:3:0,3,26	0/0:14,0:21:23.23:0,23,554	0/1:7,7:15:10.44:268,0,10	1/1:6,8:15:9.03:221,9,0	0/0:25,0:24:30.40:0,30,524	0/1:4,9:13:17.40:396,0,17	1/1:10,1:14:22.03:294,22,0	1/1:10,3:14:14.94:328,15,0	0/0:10,0:10:15.05:0,15,796	0/0:7,0:7:12.04:0,12,605	0/0:13,0:12:29.91:0,30,1212	1/1:1,11:12:9.03:245,9,0	0/0:7,0:13:8.99:0,9,202	0/1:6,0:16:29.29:156,0,29	0/1:6,0:15:14.96:78,0,15	0/1:16,0:14:2.45:3,0,2	1/1:8,3:13:15.01:271,15,0	1/1:15,14:27:3.01:35,3,0	0/0:17,0:17:30.17:0,30,1374	0/0:12,0:13:20.96:0,21,649	0/0:15,0:18:36.07:0,36,1436	1/1:4,11:16:18.06:534,18,0	0/1:14,8:22:13.54:441,0,14	0/1:9,4:12:2.82:197,0,3	0/1:14,3:17:99:512,0,158
chr10	55489615	.	T	TACAC	6197.60	PASS	AB=0.825;AC=32;AF=0.571;AN=56;BaseQRankSum=-2.745;DP=555;FS=9.145;HRun=0;HaplotypeScore=110.7065;InbreedingCoeff=0.6568;MQ=61.78;MQ0=11;MQRankSum=-1.564;QD=17.56;ReadPosRankSum=-2.175;VQSLOD=3.5319;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:30.08:0,30,448	1/1:10,0:14:9.08:138,9,0	0/0:33,0:21:17.83:0,18,248	0/0:32,0:18:3.01:0,3,37	0/0:10,0:11:21.06:0,21,314	1/1:7,13:21:21.07:501,21,0	1/1:10,12:24:30.02:658,30,0	1/1:21,0:20:12.51:173,13,0	1/1:5,6:14:9.17:350,9,0	1/1:18,6:26:36.08:728,36,0	1/1:9,4:16:11.71:227,12,0	0/0:15,0:15:15.10:0,15,413	0/0:9,0:9:15.05:0,15,238	0/0:10,0:10:18.06:0,18,286	1/1:8,3:16:6.02:143,6,0	0/1:13,1:27:99:120,0,196	0/0:24,0:25:54.15:0,54,807	0/0:16,0:16:21.07:0,21,333	1/1:8,1:9:6.02:107,6,0	0/1:11,12:24:17.97:546,0,18	1/1:17,20:40:33.17:788,33,0	0/1:14,0:15:18.30:18,0,412	0/1:13,0:13:0.72:1,0,309	0/0:20,0:21:45.10:0,45,662	1/1:5,7:17:24.08:572,24,0	1/1:12,8:23:29.77:404,30,0	1/1:5,8:18:20.65:442,21,0	1/1:6,4:12:14.79:279,15,0
chr10	55489854	.	GTATATATATATATATATATATATATATA	G	4261.83	PASS	AB=0.667;AC=21;AF=0.618;AN=34;BaseQRankSum=3.356;DP=206;FS=11.818;HRun=0;HaplotypeScore=158.5184;InbreedingCoeff=0.4762;MQ=64.74;MQ0=1;MQRankSum=-3.085;QD=38.39;ReadPosRankSum=2.520;VQSLOD=3.2717;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:6:2.99:0,3,23	1/1:5,0:8:2.47:195,2,0	./.	0/0:9,0:7:9.02:0,9,173	./.	1/1:4,0:4:2.80:13,3,0	1/1:11,0:11:6.02:98,6,0	1/1:9,0:13:11.36:57,11,0	1/1:5,6:11:12.04:870,12,0	./.	1/1:15,0:15:2.99:24,3,0	./.	./.	./.	1/1:6,7:13:15.05:1048,15,0	./.	0/0:18,0:18:21.07:0,21,1384	0/0:8,0:8:15.03:0,15,1332	./.	./.	1/1:5,2:7:3.01:79,3,0	./.	./.	0/0:1,0:1:2.97:0,3,20	1/1:8,3:11:9.03:653,9,0	0/0:15,0:15:2.87:0,3,47	0/1:7,7:14:26.25:1007,0,26	1/1:3,1:4:3.01:218,3,0
chr10	55491103	.	C	CTGTT	27366.90	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-14.388;DP=829;FS=2.943;HRun=0;HaplotypeScore=120.4467;InbreedingCoeff=0.9983;MQ=87.13;MQ0=1;MQRankSum=-8.617;QD=63.20;ReadPosRankSum=-0.315;VQSLOD=6.5064;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,120,2201	1/1:1,6:7:21.03:499,21,0	0/0:29,0:29:45.33:0,45,1138	0/0:33,0:33:84.26:0,84,1445	0/0:24,0:24:72.23:0,72,1310	1/1:2,21:23:63.17:1625,63,0	1/1:3,21:25:69.15:1717,69,0	1/1:8,24:37:99:2604,105,0	1/1:2,26:30:60.21:1611,60,0	1/1:7,31:42:99:2742,114,0	1/1:2,22:25:69.02:1457,69,0	0/0:22,0:22:66.21:0,66,1211	0/0:27,0:27:75.26:0,75,1406	0/0:32,0:32:96.33:0,96,1798	1/1:1,38:38:96.20:2401,96,0	0/0:35,0:35:96.33:0,96,1807	0/0:31,0:31:93.30:0,93,1715	0/0:19,0:19:54.18:0,54,982	1/1:5,18:26:69.22:1758,69,0	1/1:1,31:34:99:2277,102,0	1/1:5,42:47:99:2524,99,0	0/0:33,0:33:93.30:0,93,1732	0/0:31,0:31:93.32:0,93,1745	0/0:38,0:38:99:0,99,1855	1/1:0,21:21:48.16:1287,48,0	1/1:6,23:31:38.11:2042,38,0	1/1:2,35:39:87.08:2337,87,0	1/1:0,6:7:18.06:486,18,0
chr10	55492326	.	AAG	A	472.49	PASS	AB=0.700;AC=1;AF=0.018;AN=56;BaseQRankSum=5.010;DP=750;FS=0.000;HRun=0;HaplotypeScore=84.6352;InbreedingCoeff=-0.0193;MQ=91.12;MQ0=1;MQRankSum=-3.274;QD=13.50;ReadPosRankSum=2.185;VQSLOD=2.9380;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,105,1945	0/0:4,0:4:12.04:0,12,232	0/0:34,0:34:99:0,102,1885	0/0:28,0:28:78.24:0,78,1355	0/0:35,0:35:99:0,105,2011	0/0:40,0:40:99:0,114,2166	0/0:14,0:14:39.13:0,39,753	0/0:34,0:33:99:0,99,1853	0/0:25,0:25:72.25:0,72,1391	0/0:28,0:28:81.27:0,81,1529	0/0:21,0:21:60.21:0,60,1159	0/0:12,0:12:33.11:0,33,638	0/0:34,0:34:99:0,99,1879	0/0:31,0:31:93.31:0,93,1743	0/0:31,0:31:90.31:0,90,1729	0/0:26,0:26:78.27:0,78,1495	0/0:25,0:25:75.24:0,75,1385	0/0:12,0:12:30.10:0,30,579	0/0:24,0:24:69.24:0,69,1333	0/0:32,0:32:96.32:0,96,1809	0/1:20,15:34:99:547,0,913	0/0:28,0:28:78.27:0,78,1502	0/0:23,0:23:66.20:0,66,1209	0/0:14,0:14:42.14:0,42,811	0/0:26,0:26:78.27:0,78,1506	0/0:30,0:30:90.31:0,90,1738	0/0:35,0:34:99:0,105,1982	0/0:33,0:33:99:0,99,1911
chr10	55492863	.	GGCAT	G	13541.43	PASS	AB=1.000;AC=32;AF=0.571;AN=56;BaseQRankSum=18.011;DP=756;FS=0.309;HRun=0;HaplotypeScore=132.8046;InbreedingCoeff=0.9069;MQ=72.83;MQ0=1;MQRankSum=-2.112;QD=31.49;ReadPosRankSum=1.634;VQSLOD=4.7103;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:90.30:0,90,2097	1/1:0,11:11:24.08:395,24,0	0/1:12,0:12:12.66:13,0,18	0/1:14,0:13:0:0,0,0	0/0:32,0:32:75.24:0,75,1803	1/1:3,17:20:39.13:655,39,0	1/1:8,17:25:42.14:705,42,0	1/1:19,20:39:66.19:1052,66,0	1/1:9,24:33:60.21:1008,60,0	1/1:4,23:28:72.23:1183,72,0	1/1:5,20:25:57.19:956,57,0	0/0:34,0:34:93.26:0,93,2129	0/0:32,0:32:84.27:0,84,1985	0/0:28,0:28:84.29:0,84,2046	1/1:12,31:43:90.31:1511,90,0	0/0:42,0:42:63.98:0,64,2518	0/0:28,0:28:69.24:0,69,1707	0/0:21,0:21:51.18:0,51,1232	1/1:8,10:18:30.10:504,30,0	1/1:8,29:36:69.24:1159,69,0	1/1:8,28:36:69.24:1159,69,0	0/0:25,0:25:66.20:0,66,1463	0/0:24,0:24:66.23:0,66,1624	0/0:22,0:22:45.14:0,45,1055	1/1:4,18:22:51.17:857,51,0	1/1:7,23:30:69.22:1127,69,0	1/1:11,16:27:45.15:755,45,0	1/1:0,10:10:30.10:504,30,0
chr10	55493376	.	G	GTTT	10051.83	PASS	AB=0.621;AC=29;AF=0.518;AN=56;BaseQRankSum=10.277;DP=620;FS=1.095;HRun=11;HaplotypeScore=110.2120;InbreedingCoeff=0.9513;MQ=69.51;MQ0=1;MQRankSum=-4.221;QD=31.51;ReadPosRankSum=-2.206;VQSLOD=3.7670;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:46.25:0,46,780	1/1:1,1:10:26.92:240,27,0	0/0:25,0:22:15.56:0,16,370	0/0:17,0:15:23.17:0,23,321	0/0:32,0:34:85.65:0,86,979	1/1:6,13:20:39.06:662,39,0	1/1:3,14:22:48.03:719,48,0	1/1:11,1:29:52.88:454,53,0	1/1:4,9:14:18.06:325,18,0	1/1:6,20:26:58.08:1073,58,0	0/1:7,9:18:1.98:467,0,2	0/0:10,0:12:25.54:0,26,295	0/0:22,0:22:60.16:0,60,701	0/0:24,0:24:47.93:0,48,561	1/1:1,18:23:54.16:967,54,0	0/0:22,0:22:54.06:0,54,622	0/0:16,0:17:35.96:0,36,403	0/0:21,0:21:57.15:0,57,666	1/1:8,12:23:50.10:722,50,0	1/1:3,15:20:45:668,45,0	1/1:2,9:13:20.96:270,21,0	0/0:30,0:30:40.28:0,40,854	0/0:25,0:25:63.14:0,63,736	0/0:24,0:26:64.67:0,65,751	1/1:7,18:25:39.09:679,39,0	1/1:9,17:28:63.17:1062,63,0	1/1:6,24:35:78.25:1395,78,0	1/1:0,8:10:21.05:348,21,0
chr10	55493598	.	AAGCG	A	14790.33	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=13.566;DP=590;FS=10.701;HRun=0;HaplotypeScore=106.3603;InbreedingCoeff=0.9992;MQ=76.83;MQ0=0;MQRankSum=-7.283;QD=49.63;ReadPosRankSum=2.749;VQSLOD=5.7427;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,102,2733	1/1:0,12:12:33.11:639,33,0	0/0:12,0:12:33.07:0,33,815	0/0:18,0:18:48.15:0,48,1127	0/0:25,0:25:72.25:0,72,1940	1/1:0,12:12:30.10:581,30,0	1/1:0,17:17:42.14:814,42,0	1/1:8,19:27:57.18:1046,57,0	1/1:0,16:16:39.13:756,39,0	1/1:1,23:24:66.20:1243,66,0	1/1:1,18:19:54.19:1045,54,0	0/0:24,0:24:72.25:0,72,1943	0/0:25,0:25:72.23:0,72,1872	0/0:26,0:26:78.27:0,78,2114	1/1:0,21:21:60.21:1162,60,0	0/0:21,0:21:63.22:0,63,1723	0/0:20,0:20:57.20:0,57,1512	0/0:27,0:27:81.26:0,81,2047	1/1:2,22:23:66.20:1214,66,0	1/1:1,20:21:57.20:1105,57,0	1/1:3,17:20:33.11:634,33,0	0/0:14,0:14:39.13:0,39,1067	0/0:20,0:20:60.21:0,60,1625	0/0:26,0:26:72.20:0,72,1866	1/1:0,20:20:60.21:1138,60,0	1/1:1,28:29:87.30:1671,87,0	1/1:2,26:28:69.24:1337,69,0	1/1:1,7:8:21.07:404,21,0
chr10	55493704	.	TGTGGCGAGCTGAG	T	4890.94	PASS	AC=28;AF=0.519;AN=54;BaseQRankSum=-5.398;DP=515;FS=1.547;HRun=0;HaplotypeScore=174.6931;InbreedingCoeff=0.8506;MQ=74.72;MQ0=1;MQRankSum=-1.707;QD=22.96;ReadPosRankSum=0.842;VQSLOD=3.6746;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:45.14:0,45,1203	1/1:1,0:1:3.01:55,3,0	0/0:21,0:21:5.11:0,5,204	0/0:16,0:15:18.22:0,18,212	0/0:14,0:14:21.07:0,21,354	1/1:16,0:16:18.06:369,18,0	1/1:33,0:33:57.20:1045,57,0	1/1:14,0:14:24.08:411,24,0	1/1:14,0:14:30.10:550,30,0	1/1:8,0:8:3.01:55,3,0	1/1:8,0:8:12.04:219,12,0	0/0:31,0:31:84.28:0,84,2358	0/0:14,0:14:33.11:0,33,1016	0/0:27,0:27:60.20:0,60,1165	1/1:1,8:9:6.01:226,6,0	0/0:16,0:16:39.13:0,39,1249	0/0:29,0:29:69.22:0,69,2593	0/0:37,0:37:96.33:0,96,3012	1/1:12,0:12:12.04:217,12,0	./.	1/1:38,0:38:30.10:585,30,0	0/0:11,0:11:16.28:0,16,261	0/0:15,0:15:24.08:0,24,417	0/0:43,0:43:99:0,117,4186	1/1:10,0:10:3.01:55,3,0	1/1:8,11:19:27.09:537,27,0	1/1:1,19:20:12.29:454,12,0	1/1:0,11:11:3.01:114,3,0
chr10	55493717	.	G	GGT	4925.51	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-5.653;DP=470;FS=2.615;HRun=0;HaplotypeScore=68.7662;InbreedingCoeff=0.8749;MQ=65.11;MQ0=4;MQRankSum=-0.473;QD=26.77;ReadPosRankSum=-1.538;VQSLOD=5.2245;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:54.17:0,54,751	1/1:0,1:1:3.01:55,3,0	0/0:16,0:14:12.39:0,12,302	0/0:12,0:11:19.24:0,19,258	0/0:8,0:8:21.07:0,21,301	1/1:0,8:9:21.07:380,21,0	1/1:3,23:26:63.22:1154,63,0	1/1:0,8:8:24.08:411,24,0	1/1:1,14:15:39.13:697,39,0	1/1:1,3:4:6.02:110,6,0	1/1:0,7:7:15.05:274,15,0	0/0:34,0:34:96.32:0,96,1372	0/0:14,0:14:42.14:0,42,602	0/0:26,0:26:69.23:0,69,989	1/1:10,0:10:3.99:82,4,0	0/0:15,0:15:42.14:0,42,602	0/0:32,0:32:87.28:0,87,1225	0/0:40,0:40:99:0,111,1568	1/1:1,5:6:12.04:220,12,0	1/1:5,0:5:6.02:101,6,0	1/1:6,34:39:39.13:693,39,0	0/0:8,0:8:18.04:0,18,239	0/0:12,0:12:30.10:0,30,427	0/0:49,0:49:99:0,138,1947	1/1:0,5:5:9.03:165,9,0	1/1:15,0:15:27.09:461,27,0	1/1:20,0:20:9.64:118,10,0	1/1:11,0:11:2.04:6,2,0
chr10	55494230	.	TTTTG	T	7462.35	PASS	AB=0.778;AC=30;AF=0.536;AN=56;BaseQRankSum=13.854;DP=575;FS=4.139;HRun=0;HaplotypeScore=110.2632;InbreedingCoeff=0.8473;MQ=67.98;MQ0=2;MQRankSum=-0.282;QD=23.99;ReadPosRankSum=1.773;VQSLOD=4.7522;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:38.49:0,38,853	1/1:3,5:8:12.04:194,12,0	0/1:27,1:25:17.08:17,0,302	0/0:29,0:27:30.46:0,30,568	0/0:32,0:32:78.27:0,78,1808	1/1:9,12:20:24.08:388,24,0	1/1:7,8:15:18.06:291,18,0	1/1:23,10:33:30.08:452,30,0	1/1:1,14:15:32.20:531,32,0	1/1:10,13:23:39.08:568,39,0	1/1:6,10:16:27.09:436,27,0	0/0:24,0:24:54.19:0,54,1255	0/0:21,0:21:45.15:0,45,1049	0/0:17,0:17:33.11:0,33,773	1/1:5,18:23:48.16:776,48,0	0/0:23,0:23:48.16:0,48,1140	0/0:32,0:32:63.21:0,63,1485	0/0:23,0:22:42.14:0,42,949	1/1:13,10:23:30.10:476,30,0	1/1:4,13:17:39.09:601,39,0	1/1:4,5:9:12.04:194,12,0	0/0:13,0:13:21.07:0,21,507	0/0:12,0:12:33.11:0,33,777	0/0:22,0:22:48.16:0,48,1128	1/1:6,11:17:30.10:485,30,0	0/1:4,9:13:22.94:406,0,23	1/1:5,16:21:42.14:678,42,0	1/1:9,20:29:60.20:969,60,0
chr10	55495736	.	T	TG	1534.09	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-7.323;DP=706;FS=7.516;HRun=6;HaplotypeScore=71.2362;InbreedingCoeff=0.9913;MQ=84.96;MQ0=0;MQRankSum=-0.424;QD=30.68;ReadPosRankSum=-4.381;VQSLOD=2.1656;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:81.06:0,81,790	1/1:0,14:14:36.12:453,36,0	0/0:30,0:30:57.54:0,58,711	0/0:21,0:21:47.26:0,47,502	0/0:40,0:40:99:0,105,1070	0/0:25,0:25:66.15:0,66,673	0/0:19,0:19:54.11:0,54,546	1/1:3,33:36:99:1203,99,0	0/0:25,0:25:66.10:0,66,653	0/0:25,0:25:72.15:0,72,726	0/0:27,0:27:69.07:0,69,680	0/0:31,0:31:87.18:0,87,880	0/0:27,0:27:81.18:0,81,826	0/0:19,0:19:57.13:0,57,581	0/0:35,0:35:93.19:0,93,941	0/0:23,0:23:57.12:0,57,577	0/0:21,0:21:54.09:0,54,536	0/0:20,0:20:57.11:0,57,573	0/0:13,0:13:27.06:0,27,275	0/0:34,0:34:93.16:0,93,930	0/0:22,0:22:55.35:0,55,546	0/0:19,0:19:57.13:0,57,581	0/0:34,0:34:96.16:0,96,962	0/0:24,0:24:66.07:0,66,646	0/0:20,0:20:54.12:0,54,550	0/0:34,0:34:93.18:0,93,932	0/0:30,0:28:87.20:0,87,887	0/0:5,0:5:15.03:0,15,153
chr10	55496214	.	TC	T	1330.24	PASS	AB=0.921;AC=49;AF=0.875;AN=56;BaseQRankSum=-0.317;DP=367;FS=3.392;HRun=13;HaplotypeScore=58.1512;InbreedingCoeff=0.2236;MQ=76.56;MQ0=3;MQRankSum=-1.959;QD=3.91;ReadPosRankSum=2.571;VQSLOD=0.3632;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:13,3:17:16.75:102,17,0	0/1:4,0:4:0:0,0,0	0/0:27,0:17:4.16:0,4,134	0/1:23,0:16:21.85:22,0,39	1/1:8,8:17:22.29:124,22,0	1/1:4,2:6:2.97:22,3,0	1/1:8,5:13:8.93:65,9,0	1/1:12,1:15:1.95:6,2,0	1/1:6,5:12:10.93:72,11,0	1/1:4,4:8:8.94:66,9,0	1/1:5,2:8:0.36:23,0,0	1/1:13,2:17:10.84:64,11,0	1/1:10,1:11:8.22:47,8,0	0/1:12,0:12:2.32:2,0,51	1/1:9,5:14:8.82:61,9,0	0/1:16,3:19:0.72:1,0,117	1/1:9,7:17:13.89:90,14,0	1/1:7,7:13:17.83:128,18,0	1/1:9,2:13:4.98:28,5,0	1/1:7,2:9:5.94:44,6,0	0/1:11,6:16:5.51:66,0,6	1/1:3,4:8:7.97:47,8,0	1/1:7,2:9:9.64:58,10,0	1/1:6,3:10:10.96:71,11,0	1/1:1,6:7:2.97:22,3,0	1/1:8,7:15:11.81:80,12,0	1/1:12,5:18:12.66:98,13,0	1/1:6,1:7:5.94:44,6,0
chr10	55499940	.	G	GC	4516.49	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=17.033;DP=587;FS=0.349;HRun=0;HaplotypeScore=139.6746;InbreedingCoeff=0.9534;MQ=88.73;MQ0=0;MQRankSum=-16.608;QD=26.57;ReadPosRankSum=3.419;VQSLOD=4.9788;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:62,0:62:99:0,187,2573	0/0:7,0:7:21.07:0,21,294	0/0:27,0:27:74.42:0,74,980	0/0:23,0:23:57.09:0,57,832	0/0:28,0:28:84.28:0,84,1168	1/1:2,9:10:8.07:262,8,0	1/1:3,8:11:2.97:220,3,0	0/0:34,0:34:96.31:0,96,1328	1/1:3,16:20:51.99:525,52,0	1/1:3,9:13:20.71:312,21,0	1/1:2,9:12:9.19:242,9,0	0/0:35,0:35:99:0,99,1382	0/0:21,0:21:60.20:0,60,839	0/0:20,0:20:60.20:0,60,839	1/1:1,17:18:36.54:480,37,0	0/0:35,0:35:99:0,105,1469	0/0:46,0:46:99:0,138,1911	0/0:25,0:25:75.25:0,75,1046	1/1:2,6:8:16.76:202,17,0	1/1:1,17:18:41.90:543,42,0	1/1:1,7:8:22.11:196,22,0	0/0:8,0:8:21.07:0,21,291	0/0:12,0:12:36.12:0,36,503	0/0:34,0:34:99:0,99,1380	1/1:0,15:15:31.31:435,31,0	1/1:3,10:13:28.70:383,29,0	1/1:1,16:17:45.31:519,45,0	1/1:0,6:6:18.05:198,18,0
chr10	55499942	.	C	CCCA	4962.30	PASS	AB=0.554;AC=22;AF=0.393;AN=56;BaseQRankSum=17.514;DP=588;FS=0.000;HRun=0;HaplotypeScore=157.1900;InbreedingCoeff=0.6997;MQ=89.26;MQ0=0;MQRankSum=-16.986;QD=29.36;ReadPosRankSum=4.627;VQSLOD=4.7239;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:63,0:63:99:0,184,3403	0/0:8,0:8:21.07:0,21,392	0/0:25,0:25:69.02:0,69,1211	0/0:25,0:25:65:0,65,1052	0/0:28,0:28:78.24:0,78,1386	1/1:2,9:10:8.52:309,9,0	0/1:2,8:10:4.75:230,0,5	0/0:35,0:35:99:0,102,1808	1/1:2,16:18:48.12:559,48,0	1/1:5,9:14:1.36:299,1,0	0/1:5,7:12:38.65:274,0,39	0/0:35,0:35:99:0,102,1892	0/0:21,0:21:63.19:0,63,1106	0/0:20,0:20:60.19:0,60,1088	1/1:3,15:18:45.27:587,45,0	0/0:35,0:35:99:0,105,1927	0/0:46,0:46:99:0,135,2508	0/0:24,0:24:72.25:0,72,1342	1/1:0,6:9:16.16:239,16,0	0/1:2,17:19:0.14:591,0,0	0/1:0,7:7:25.49:162,0,25	0/0:8,0:8:18.06:0,18,336	0/0:12,0:12:36.12:0,36,671	0/0:34,0:34:99:0,102,1848	1/1:0,15:15:33.19:507,33,0	1/1:0,10:13:7.50:368,7,0	1/1:1,16:17:45.02:601,45,0	1/1:0,6:6:18.06:235,18,0
chr10	55499943	.	T	TAAGCC	12710.44	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=18.213;DP=625;FS=0.649;HRun=0;HaplotypeScore=176.5898;InbreedingCoeff=0.9978;MQ=85.58;MQ0=0;MQRankSum=-17.315;QD=59.39;ReadPosRankSum=-1.196;VQSLOD=4.9289;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:62,0:62:99:0,187,4231	0/0:8,0:8:24.07:0,24,496	0/0:24,0:24:72.08:0,72,1517	0/0:24,0:24:68.19:0,68,1320	0/0:25,0:25:72.24:0,72,1626	1/1:4,9:12:39.13:854,39,0	1/1:7,8:15:45.15:893,45,0	0/0:34,0:34:96.32:0,96,2150	1/1:8,16:24:66.23:1366,66,0	1/1:8,9:17:39.13:891,39,0	1/1:6,7:14:33.20:778,33,0	0/0:36,0:36:99:0,105,2384	0/0:21,0:21:60.18:0,60,1310	0/0:19,0:19:57.20:0,57,1328	1/1:5,15:20:55.07:1183,55,0	0/0:35,0:35:99:0,102,2377	0/0:46,0:46:99:0,138,3126	0/0:25,0:25:72.25:0,72,1654	1/1:11,6:17:51.11:989,51,0	1/1:5,17:22:63.62:1247,64,0	1/1:3,7:10:27.09:531,27,0	0/0:7,0:7:18.06:0,18,419	0/0:12,0:12:36.12:0,36,839	0/0:33,0:33:99:0,99,2206	1/1:5,15:20:57.17:1176,57,0	1/1:5,10:15:42.14:968,42,0	1/1:4,16:20:60.21:1356,60,0	1/1:1,6:7:21.07:477,21,0
chr10	55500806	.	TGAGA	T	7131.26	PASS	AB=0.524;AC=29;AF=0.518;AN=56;BaseQRankSum=14.073;DP=402;FS=16.044;HRun=0;HaplotypeScore=127.7223;InbreedingCoeff=0.9414;MQ=73.06;MQ0=1;MQRankSum=-14.184;QD=36.76;ReadPosRankSum=0.896;VQSLOD=4.3609;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:96.33:0,96,2628	1/1:0,6:6:18.06:314,18,0	0/0:17,0:17:44.92:0,45,1111	0/0:24,0:23:60.16:0,60,1351	0/0:14,0:14:42.14:0,42,1132	1/1:4,16:20:46.99:863,47,0	1/1:3,6:9:18.06:319,18,0	1/1:7,7:14:20.18:327,20,0	1/1:0,9:9:24.07:407,24,0	1/1:0,3:3:9.03:168,9,0	0/1:1,7:10:1.63:95,0,2	0/0:11,0:11:33.11:0,33,923	0/0:10,0:10:30.10:0,30,839	0/0:16,0:16:48.16:0,48,1340	1/1:4,10:14:30.10:502,30,0	0/0:11,0:11:33.11:0,33,839	0/0:24,0:24:72.25:0,72,1983	0/0:24,0:24:72.25:0,72,2014	1/1:7,9:16:31.41:574,31,0	1/1:2,7:9:20.81:334,21,0	1/1:3,8:11:18.06:320,18,0	0/0:5,0:5:15.05:0,15,389	0/0:9,0:9:27.09:0,27,755	0/0:11,0:11:33.11:0,33,902	1/1:1,15:17:33.92:628,34,0	1/1:4,18:25:57.20:1045,57,0	1/1:5,15:20:45.15:803,45,0	1/1:1,8:9:19.91:430,20,0
chr10	55500807	.	GAGAGCCTTAGAGCC	G	5279.55	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=14.542;DP=375;FS=11.072;HRun=0;HaplotypeScore=205.5605;InbreedingCoeff=0.9554;MQ=75.26;MQ0=1;MQRankSum=-13.656;QD=31.80;ReadPosRankSum=-0.134;VQSLOD=3.0916;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,102,6689	1/1:6,0:6:18.04:183,18,0	0/0:16,0:16:45.12:0,45,2257	0/0:24,0:23:59.77:0,60,2429	0/0:14,0:14:42.14:0,42,2708	1/1:18,0:18:54.14:654,54,0	1/1:6,0:6:18.04:186,18,0	1/1:7,3:10:24.08:394,24,0	1/1:9,0:9:24.04:249,24,0	1/1:3,0:3:9.03:112,9,0	1/1:10,0:9:9.02:110,9,0	0/0:11,0:11:33.11:0,33,2273	0/0:10,0:10:30.10:0,30,2067	0/0:16,0:16:48.16:0,48,3425	1/1:10,0:10:29.62:283,30,0	0/0:11,0:11:33.11:0,33,2016	0/0:24,0:24:72.25:0,72,5091	0/0:24,0:24:72.25:0,72,5100	1/1:9,5:14:42.11:646,42,0	1/1:9,0:8:21.06:296,21,0	1/1:9,0:9:18.51:189,19,0	0/0:5,0:5:15.05:0,15,891	0/0:9,0:9:27.09:0,27,1944	0/0:11,0:11:33.11:0,33,2156	1/1:16,0:16:42.06:463,42,0	1/1:22,0:22:3.63:678,4,0	1/1:15,0:15:45.11:491,45,0	1/1:9,0:9:27.08:346,27,0
chr10	55500814	.	TTAGA	T	8085.46	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=14.446;DP=377;FS=13.802;HRun=0;HaplotypeScore=120.9307;InbreedingCoeff=0.9726;MQ=71.90;MQ0=0;MQRankSum=-13.819;QD=47.84;ReadPosRankSum=0.526;VQSLOD=5.2695;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,102,2863	1/1:0,6:6:18.06:343,18,0	0/0:15,0:15:40.53:0,41,1014	0/0:22,0:22:60.03:0,60,1346	0/0:13,0:13:39.13:0,39,1103	1/1:0,16:16:48.16:920,48,0	1/1:0,6:6:18.06:348,18,0	1/1:3,7:10:15.99:304,16,0	1/1:0,9:9:24.08:446,24,0	1/1:0,5:5:15.03:253,15,0	1/1:3,7:9:6.02:113,6,0	0/0:11,0:11:33.11:0,33,931	0/0:10,0:10:30.10:0,30,868	0/0:16,0:16:48.16:0,48,1391	1/1:0,10:10:30.10:548,30,0	0/0:12,0:12:33.11:0,33,930	0/0:25,0:25:75.26:0,75,2173	0/0:27,0:27:78.27:0,78,2255	1/1:7,9:16:36.59:691,37,0	1/1:2,7:8:20.99:367,21,0	1/1:1,8:9:18.06:348,18,0	0/0:4,0:4:12.04:0,12,348	0/0:9,0:9:27.09:0,27,778	0/0:10,0:10:30.10:0,30,870	1/1:2,16:18:42.14:802,42,0	1/1:4,18:22:66.20:1256,66,0	1/1:0,15:15:45.15:874,45,0	1/1:0,8:8:24.08:474,24,0
chr10	55501650	.	TCTTC	T	9308.35	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=15.006;DP=517;FS=3.693;HRun=0;HaplotypeScore=88.5592;InbreedingCoeff=0.9772;MQ=77.50;MQ0=0;MQRankSum=-4.812;QD=41.01;ReadPosRankSum=3.253;VQSLOD=5.2943;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,99,2522	0/0:5,0:5:15.05:0,15,392	0/0:17,0:16:16.41:0,16,514	0/0:11,0:11:16.25:0,16,288	0/0:15,0:15:45.12:0,45,1035	1/1:1,17:18:42.14:783,42,0	1/1:2,17:19:27.09:502,27,0	0/0:24,0:24:57.16:0,57,1307	1/1:0,16:16:42.14:782,42,0	1/1:3,20:23:57.18:1024,57,0	1/1:2,9:11:17.98:297,18,0	0/0:22,0:22:63.20:0,63,1607	0/0:23,0:23:66.20:0,66,1632	0/0:29,0:29:87.29:0,87,2214	1/1:1,23:24:54.18:988,54,0	0/0:15,0:15:45.15:0,45,1200	0/0:32,0:32:84.26:0,84,2122	0/0:21,0:21:60.16:0,60,1399	1/1:0,25:25:75.05:1156,75,0	1/1:1,15:16:36.12:660,36,0	1/1:2,27:29:51.17:952,51,0	0/0:12,0:12:36.11:0,36,882	0/0:7,0:7:21.07:0,21,556	0/0:22,0:21:60.18:0,60,1492	1/1:0,6:6:18.06:336,18,0	1/1:1,13:13:33.11:600,33,0	1/1:2,22:24:60.21:1119,60,0	1/1:0,2:2:6.02:112,6,0
chr10	55503156	.	T	TC	16103.17	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=20.366;DP=826;FS=14.233;HRun=0;HaplotypeScore=125.3018;InbreedingCoeff=0.9994;MQ=83.84;MQ0=0;MQRankSum=-4.698;QD=43.17;ReadPosRankSum=2.188;VQSLOD=2.8996;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,163,2246	0/0:11,0:11:33.11:0,33,461	0/0:29,0:29:83.96:0,84,1091	0/0:19,0:19:54.25:0,54,650	0/0:39,0:39:99:0,108,1471	1/1:0,39:39:99:1642,105,0	1/1:0,26:26:69.23:1077,69,0	0/0:35,0:35:99:0,105,1425	1/1:0,20:20:57.19:891,57,0	1/1:0,34:34:99:1594,102,0	1/1:0,24:24:60.12:899,60,0	0/0:34,0:34:99:0,99,1319	0/0:24,0:24:69.23:0,69,964	0/0:36,0:36:99:0,105,1436	1/1:1,39:40:99:1642,105,0	0/0:43,0:43:99:0,129,1803	0/0:23,0:23:66.22:0,66,921	0/0:19,0:19:54.15:0,54,733	1/1:0,23:23:69.22:1059,69,0	1/1:0,39:39:99:1682,111,0	1/1:0,37:37:99:1642,105,0	0/0:26,0:26:78.24:0,78,1059	0/0:30,0:30:87.26:0,87,1155	0/0:30,0:30:90.23:0,90,1201	1/1:0,27:27:75.26:1173,75,0	1/1:0,31:31:93.27:1404,93,0	1/1:0,26:26:69.23:1068,69,0	1/1:0,7:7:21.07:328,21,0
chr10	55505841	.	AT	A	10948.46	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=14.286;DP=697;FS=5.158;HRun=2;HaplotypeScore=67.6321;InbreedingCoeff=0.9996;MQ=85.19;MQ0=0;MQRankSum=-1.570;QD=35.32;ReadPosRankSum=2.963;VQSLOD=5.5127;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,114,1705	0/0:10,0:10:30.10:0,30,449	0/0:22,0:22:60.12:0,60,751	0/0:22,0:22:47.98:0,48,566	0/0:35,0:35:99:0,105,1573	1/1:0,30:30:75.24:973,75,0	1/1:0,24:24:69.22:895,69,0	0/0:33,0:33:87.27:0,87,1250	1/1:0,22:22:60.20:779,60,0	1/1:2,24:26:72.22:921,72,0	1/1:0,19:19:54.18:701,54,0	0/0:31,0:31:93.27:0,93,1313	0/0:21,0:21:60.16:0,60,856	0/0:33,0:33:99:0,99,1461	1/1:3,36:39:93.30:1207,93,0	0/0:28,0:28:84.24:0,84,1195	0/0:17,0:17:48.14:0,48,694	0/0:19,0:19:54.07:0,54,717	1/1:0,19:19:57.15:699,57,0	1/1:0,29:29:81.26:1051,81,0	1/1:1,20:21:54.18:700,54,0	0/0:22,0:22:66.22:0,66,988	0/0:37,0:37:99:0,111,1609	0/0:19,0:19:57.18:0,57,834	1/1:0,20:20:57.19:740,57,0	1/1:0,25:25:75.23:959,75,0	1/1:0,26:26:78.25:1012,78,0	1/1:0,10:10:24.08:311,24,0
chr10	55506440	.	A	AAAGG	11239.81	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=14.808;DP=837;FS=21.938;HRun=0;HaplotypeScore=265.1307;InbreedingCoeff=0.9944;MQ=57.46;MQ0=1;MQRankSum=-17.039;QD=26.20;ReadPosRankSum=-2.832;VQSLOD=3.0813;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:48:99:0,108,1646	1/1:3,7:11:12.04:269,12,0	0/0:26,0:20:26.99:0,27,305	0/0:30,0:25:17.91:0,18,243	0/0:37,0:37:93.26:0,93,1422	1/1:34,0:34:77.70:907,78,0	1/1:40,0:40:83.45:883,83,0	1/1:16,12:32:57.07:948,57,0	1/1:26,0:26:62.65:662,63,0	1/1:27,0:27:59.96:743,60,0	1/1:31,0:31:80.46:906,80,0	0/0:27,0:27:60.19:0,60,941	0/0:35,0:35:78.24:0,78,1220	0/0:26,0:26:69.21:0,69,1066	1/1:32,0:32:83.47:927,83,0	0/0:26,0:26:51.15:0,51,792	0/0:30,0:30:60.18:0,60,938	0/0:41,0:41:75.16:0,75,1116	1/1:30,0:30:62.86:700,63,0	1/1:24,0:27:56.57:583,57,0	1/1:24,0:24:42.46:484,42,0	0/0:31,0:31:63.17:0,63,937	0/0:22,0:22:54.14:0,54,834	0/0:28,0:28:63.18:0,63,964	1/1:34,0:34:68.75:860,69,0	1/1:35,0:37:92.61:1016,93,0	1/1:33,0:33:81.65:882,82,0	1/1:11,0:11:30.03:468,30,0
chr10	55506940	.	GT	G	571.11	PASS	AB=0.909;AC=5;AF=0.089;AN=56;BaseQRankSum=-5.780;DP=715;FS=0.000;HRun=12;HaplotypeScore=112.7765;InbreedingCoeff=0.7332;MQ=66.84;MQ0=25;MQRankSum=2.288;QD=8.40;ReadPosRankSum=-5.142;VQSLOD=1.3698;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:26,3:30:23.72:24,0,474	1/1:2,5:9:22:151,22,0	0/0:61,1:10:17.88:0,18,139	0/0:61,0:15:17.17:0,17,98	0/0:20,0:20:27.04:0,27,418	0/0:19,0:19:28.95:0,29,127	0/0:15,0:15:26.90:0,27,112	1/1:5,24:29:68.63:525,69,0	0/0:16,0:16:25.90:0,26,124	0/0:26,0:26:42.79:0,43,191	0/0:19,0:19:45.80:0,46,195	0/0:16,0:21:38.75:0,39,376	0/0:21,0:21:49.87:0,50,465	0/0:25,0:25:49.18:0,49,568	0/0:28,0:28:58.74:0,59,241	0/0:23,0:23:51.10:0,51,517	0/0:18,0:18:41.89:0,42,398	0/0:20,0:21:31.79:0,32,461	0/0:25,0:24:40.24:0,40,193	0/0:31,0:31:65.09:0,65,293	0/0:32,0:31:47.69:0,48,205	0/0:14,1:17:6.33:0,6,271	0/0:21,0:20:53.58:0,54,518	0/0:2,0:12:16.80:0,17,82	0/0:26,0:26:64.56:0,65,273	0/0:38,0:38:71.16:0,71,337	0/0:34,0:34:65.79:0,66,287	0/0:14,0:14:17.81:0,18,90
chr10	55506943	.	T	TG	10231.11	PASS	AB=1.000;AC=27;AF=0.482;AN=56;BaseQRankSum=-4.754;DP=724;FS=2.667;HRun=0;HaplotypeScore=79.3642;InbreedingCoeff=0.9290;MQ=66.30;MQ0=29;MQRankSum=1.163;QD=30.54;ReadPosRankSum=4.742;VQSLOD=4.7238;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:79.39:0,79,905	0/0:9,0:9:26.89:0,27,203	0/0:71,0:11:20.61:0,21,181	0/0:67,0:17:14.21:0,14,148	0/0:20,0:20:45.76:0,46,640	1/1:1,18:19:39.13:508,39,0	1/1:0,12:12:30.10:394,30,0	0/0:28,0:28:83.68:0,84,645	1/1:1,16:17:42.05:520,42,0	1/1:1,25:26:75.17:904,75,0	1/1:0,18:18:54.01:671,54,0	0/0:20,0:20:42.33:0,42,596	0/0:21,0:21:58.29:0,58,653	0/0:24,0:24:68.49:0,68,858	1/1:0,27:27:66.22:875,66,0	0/0:20,0:20:60.18:0,60,791	0/0:19,0:19:40.12:0,40,515	0/0:20,0:20:55.82:0,56,708	1/1:2,23:24:24.46:698,24,0	1/1:0,32:32:95.94:1142,96,0	1/1:4,30:33:39.76:766,40,0	0/0:17,0:17:46.35:0,46,540	0/0:21,0:20:56.90:0,57,731	0/1:11,0:11:14.57:15,0,15	1/1:2,23:25:68.55:934,69,0	1/1:4,35:39:53.46:1241,53,0	1/1:1,36:37:87.24:1139,87,0	1/1:0,12:13:33.10:424,33,0
chr10	55507629	.	C	CT	4191.12	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-6.346;DP=589;FS=17.443;HRun=11;HaplotypeScore=73.7180;InbreedingCoeff=0.9076;MQ=76.08;MQ0=0;MQRankSum=-2.717;QD=14.86;ReadPosRankSum=-3.619;VQSLOD=1.6349;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:49,1:51:8.60:0,9,659	0/0:14,1:16:13.42:0,13,277	0/0:19,0:20:29.26:0,29,168	0/0:12,0:13:7.06:0,7,93	0/0:22,0:23:45.16:0,45,316	1/1:5,19:24:24.05:244,24,0	1/1:6,15:22:35.91:349,36,0	1/1:12,21:34:16.69:516,17,0	1/1:2,13:17:32.90:319,33,0	1/1:8,14:23:15.80:325,16,0	1/1:6,6:14:28.83:224,29,0	0/0:26,0:27:59.97:0,60,436	0/0:20,0:20:41.80:0,42,325	0/0:21,0:21:50.65:0,51,386	1/1:8,17:26:23.52:415,24,0	0/0:13,0:13:26.87:0,27,209	0/0:23,0:24:55.80:0,56,423	0/0:19,1:22:21.41:0,21,329	1/1:6,21:27:54.32:513,54,0	1/1:5,8:13:3.63:175,4,0	1/1:7,17:24:24.05:244,24,0	0/0:13,2:15:5.36:0,5,220	0/0:21,0:22:19.51:0,20,280	0/0:17,0:19:45.87:0,46,337	1/1:5,12:17:17.98:165,18,0	1/1:7,10:17:30:284,30,0	1/1:4,16:22:24.12:401,24,0	1/1:0,2:2:2.94:18,3,0
chr10	55507793	.	ATG	A	959.17	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=2.238;DP=641;FS=6.730;HRun=0;HaplotypeScore=160.4488;InbreedingCoeff=0.9371;MQ=67.57;MQ0=0;MQRankSum=2.925;QD=22.84;ReadPosRankSum=-3.327;VQSLOD=2.8195;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:63.20:0,63,996	1/1:2,7:9:18.06:220,18,0	0/0:32,0:28:51.14:0,51,764	0/0:23,0:21:33.02:0,33,435	0/0:22,0:22:57.19:0,57,918	0/0:24,0:24:34.97:0,35,255	0/0:26,0:26:11.69:0,12,118	1/1:10,23:33:72.21:859,72,0	0/0:13,0:13:20.42:0,20,152	0/0:23,0:23:32.70:0,33,326	0/0:16,0:16:14.74:0,15,115	0/0:31,0:31:75.22:0,75,1149	0/0:18,0:18:45.15:0,45,730	0/0:28,0:28:75.24:0,75,1191	0/0:28,0:28:24.04:0,24,166	0/0:18,1:19:20.54:0,21,839	0/0:18,0:18:42.14:0,42,681	0/0:11,0:11:30.08:0,30,460	0/0:23,0:23:32.41:0,32,251	0/0:25,0:25:26.74:0,27,219	0/0:12,0:12:13.49:0,13,82	0/0:24,0:24:57.19:0,57,922	0/0:33,0:33:93.32:0,93,1496	0/0:42,0:42:96.31:0,96,1495	0/0:20,0:20:26.48:0,26,204	0/0:29,0:29:52.67:0,53,498	0/0:20,0:20:25.97:0,26,212	0/0:6,0:6:11.99:0,12,103
chr10	55507799	.	G	GTGTGTGTGTGTGTCTA	29982.25	PASS	AB=1.000;AC=27;AF=0.482;AN=56;BaseQRankSum=-9.398;DP=689;FS=0.000;HRun=0;HaplotypeScore=257.0791;InbreedingCoeff=0.9299;MQ=62.04;MQ0=0;MQRankSum=-14.308;QD=92.25;ReadPosRankSum=2.276;VQSLOD=4.0033;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:60.18:0,60,2372	0/0:11,0:11:26.73:0,27,668	0/0:34,0:28:57.17:0,57,1669	0/0:22,0:20:41.19:0,41,1069	0/0:24,0:24:63.20:0,63,2299	1/1:10,11:26:42.14:2878,42,0	1/1:18,7:31:23.84:1687,24,0	0/0:28,0:28:77.87:0,78,2132	1/1:2,10:20:21.07:1605,21,0	1/1:6,12:25:60.68:3269,61,0	1/1:6,7:22:18.06:1355,18,0	0/0:32,0:32:78.25:0,78,2871	0/0:16,0:16:45.15:0,45,1886	0/0:28,0:28:78.27:0,78,3243	1/1:9,19:34:30.10:2213,30,0	0/0:19,0:19:57.20:0,57,2382	0/0:18,0:18:42.14:0,42,1885	0/1:11,0:11:10.42:10,0,1191	1/1:14,6:29:66.23:2915,66,0	1/1:11,11:29:36.12:2680,36,0	1/1:8,4:15:18.06:1003,18,0	0/0:25,0:25:63.22:0,63,2518	0/0:37,0:37:99:0,105,4035	0/0:40,0:40:92.38:0,92,3963	1/1:10,8:20:30.10:2163,30,0	1/1:10,17:34:71.96:4082,72,0	1/1:5,11:22:36.12:2752,36,0	1/1:2,3:7:18.06:1370,18,0
chr10	55508858	.	G	GT	628.90	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-5.390;DP=592;FS=8.739;HRun=7;HaplotypeScore=58.3962;InbreedingCoeff=0.8298;MQ=78.92;MQ0=0;MQRankSum=-1.783;QD=28.59;ReadPosRankSum=-4.403;VQSLOD=2.1281;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,102,985	0/0:9,0:9:27.02:0,27,254	0/0:15,0:15:33.05:0,33,319	0/0:15,0:16:2.04:0,2,197	0/0:26,0:26:72.09:0,72,688	0/0:25,0:25:72.10:0,72,689	0/0:21,0:21:60.10:0,60,579	1/1:1,21:22:63.15:724,63,0	0/0:24,0:24:63.06:0,63,596	0/0:15,0:15:42.06:0,42,400	0/0:20,0:20:60.10:0,60,579	0/0:19,0:19:54.05:0,54,511	0/0:22,0:22:54.08:0,54,521	0/0:17,0:17:45.05:0,45,429	0/0:24,0:24:60.06:0,60,571	0/0:13,0:13:39.06:0,39,377	0/0:20,0:19:57.08:0,57,546	0/0:24,0:24:54.07:0,54,521	0/0:18,0:18:45.05:0,45,428	0/0:22,0:22:63.10:0,63,608	0/0:28,0:28:81.11:0,81,776	0/0:23,0:23:63.08:0,63,603	0/0:27,0:27:72.11:0,72,695	0/0:25,0:25:69.10:0,69,666	0/0:20,0:20:51.05:0,51,484	0/0:25,0:25:63.08:0,63,604	0/0:25,0:25:69.11:0,69,666	0/0:10,0:10:27.04:0,27,261
chr10	55508926	.	A	AT	7098.09	PASS	AB=1.000;AC=27;AF=0.482;AN=56;BaseQRankSum=-15.103;DP=586;FS=1.835;HRun=9;HaplotypeScore=57.9999;InbreedingCoeff=0.9341;MQ=79.38;MQ0=1;MQRankSum=-0.245;QD=26.10;ReadPosRankSum=-0.019;VQSLOD=5.2752;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,105,911	0/0:10,0:10:29.67:0,30,245	0/0:21,0:19:17.08:0,17,230	0/1:18,0:17:8.19:8,0,142	0/0:31,0:31:86.96:0,87,752	1/1:1,19:20:54.15:597,54,0	1/1:2,12:14:35.96:373,36,0	0/0:25,0:25:62.97:0,63,541	1/1:1,18:19:48.13:531,48,0	1/1:1,15:16:45.12:498,45,0	1/1:5,30:35:64.11:908,64,0	0/0:25,0:25:71.97:0,72,625	0/0:23,0:24:65.81:0,66,561	0/0:19,0:19:50.99:0,51,443	1/1:2,17:19:48.13:531,48,0	0/0:15,0:15:44.99:0,45,391	0/0:20,0:20:59.99:0,60,521	0/0:21,0:21:62.90:0,63,533	1/1:4,13:18:41.94:441,42,0	1/1:1,24:25:69.09:735,69,0	1/1:4,12:16:39.09:423,39,0	0/0:19,0:19:44.98:0,45,391	0/0:20,0:20:56.94:0,57,486	0/0:25,0:24:62.98:0,63,547	1/1:2,21:23:63.17:697,63,0	1/1:1,20:21:57.15:631,57,0	1/1:2,20:22:31.07:560,31,0	1/1:0,5:5:15.04:166,15,0
chr10	55509969	.	TAC	T	536.99	PASS	AB=0.929;AC=21;AF=0.477;AN=44;BaseQRankSum=5.425;DP=441;FS=5.721;HRun=0;HaplotypeScore=55.3116;InbreedingCoeff=0.1863;MQ=72.28;MQ0=3;MQRankSum=0.608;QD=2.41;ReadPosRankSum=-0.775;VQSLOD=0.3395;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:20,0:20:16.89:26,0,17	./.	./.	./.	0/1:19,3:22:35.13:55,0,35	0/1:27,0:27:3.63:4,0,119	0/0:15,0:15:9.01:0,9,109	./.	1/1:9,0:15:5.68:28,6,0	0/0:19,0:19:3.87:0,4,25	0/0:14,0:14:5.99:0,6,49	1/1:7,1:10:14.70:122,15,0	./.	0/1:20,1:21:14.13:14,0,159	0/1:13,0:14:20.44:20,0,87	1/1:10,0:11:3.01:31,3,0	0/1:20,1:21:4.77:50,0,5	1/1:17,1:20:8.69:60,9,0	./.	0/0:22,0:22:9:0,9,93	0/0:24,0:24:17.65:0,18,162	1/1:7,3:10:6.02:64,6,0	1/1:10,2:13:5.85:46,6,0	1/1:4,6:11:14.87:143,15,0	0/0:13,0:13:14.97:0,15,138	0/0:17,0:17:3.01:0,3,44	0/1:5,2:7:23.15:23,0,58	0/0:7,0:7:2.99:0,3,24
chr10	55510503	.	C	CAGG	16568.74	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-11.388;DP=626;FS=5.708;HRun=0;HaplotypeScore=86.3602;InbreedingCoeff=0.9984;MQ=83.57;MQ0=0;MQRankSum=-6.515;QD=57.73;ReadPosRankSum=0.580;VQSLOD=6.8813;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,105,1764	0/0:12,0:12:36.09:0,36,537	0/0:24,0:24:17.36:0,17,888	0/0:21,0:21:25.61:0,26,658	0/0:24,0:24:72.24:0,72,1195	1/1:0,17:17:48.16:1104,48,0	1/1:5,18:24:60.21:1364,60,0	0/0:33,0:33:99:0,99,1616	1/1:1,20:22:54.19:1245,54,0	1/1:1,11:13:36.12:820,36,0	1/1:1,14:16:42.14:964,42,0	0/0:25,0:25:69.21:0,69,1122	0/0:16,0:16:48.15:0,48,784	0/0:21,0:21:63.20:0,63,1046	1/1:2,23:24:66.23:1494,66,0	0/0:15,0:15:42.14:0,42,716	0/0:32,0:32:96.31:0,96,1602	0/0:20,0:20:57.19:0,57,966	1/1:5,13:19:54.12:1068,54,0	1/1:3,24:28:72.25:1657,72,0	1/1:2,20:22:42.14:950,42,0	0/0:16,0:16:48.15:0,48,770	0/0:19,0:19:48.16:0,48,813	0/0:22,0:22:60.19:0,60,988	1/1:3,19:22:57.20:1304,57,0	1/1:4,26:30:81.25:1731,81,0	1/1:3,29:31:90.31:2068,90,0	1/1:2,15:17:39.05:801,39,0
chr10	55511895	.	TC	T	9512.09	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=14.101;DP=709;FS=15.849;HRun=5;HaplotypeScore=70.6412;InbreedingCoeff=0.9995;MQ=71.60;MQ0=0;MQRankSum=-0.108;QD=30.39;ReadPosRankSum=2.769;VQSLOD=3.8163;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,129,1667	0/0:10,0:10:27.09:0,27,369	0/0:27,0:27:66.15:0,66,856	0/0:18,1:18:23.58:0,24,618	0/0:22,0:22:57.17:0,57,762	1/1:0,19:19:54.15:613,54,0	1/1:2,30:32:84.24:953,84,0	0/0:24,0:24:60.14:0,60,743	1/1:2,25:27:72.20:817,72,0	1/1:3,22:25:63.18:714,63,0	1/1:2,15:17:42.12:474,42,0	0/0:26,0:26:72.24:0,72,984	0/0:30,0:30:90.30:0,90,1230	0/0:18,0:18:54.18:0,54,737	1/1:0,30:30:87.25:987,87,0	0/0:26,0:26:75.25:0,75,1026	0/0:42,0:42:99:0,120,1626	0/0:33,0:33:99:0,99,1317	1/1:2,14:16:39.09:432,39,0	1/1:1,15:16:45.13:510,45,0	1/1:0,37:37:99:1156,102,0	0/0:19,0:19:54.17:0,54,722	0/0:27,0:27:72.18:0,72,902	0/0:24,0:25:66.22:0,66,901	1/1:2,14:16:39.11:442,39,0	1/1:2,26:28:78.22:883,78,0	1/1:1,28:29:78.22:885,78,0	1/1:2,19:21:57.16:647,57,0
chr10	55514655	.	TA	T	9562.69	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=15.600;DP=626;FS=7.415;HRun=4;HaplotypeScore=57.9275;InbreedingCoeff=0.9984;MQ=82.58;MQ0=0;MQRankSum=-1.425;QD=32.31;ReadPosRankSum=1.552;VQSLOD=5.3618;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:99:0,99,1367	0/0:10,0:10:30.10:0,30,420	0/0:16,0:16:23.64:0,24,485	0/0:18,0:18:48.16:0,48,663	0/0:30,0:30:87.23:0,87,1149	1/1:0,38:38:99:1260,105,0	1/1:0,10:10:27.08:324,27,0	0/0:30,0:30:84.27:0,84,1162	1/1:0,22:22:54.17:648,54,0	1/1:1,38:39:99:1379,117,0	1/1:3,18:21:42.13:504,42,0	0/0:23,0:23:66.20:0,66,905	0/0:22,0:22:63.21:0,63,880	0/0:18,0:18:51.16:0,51,697	1/1:0,18:18:48.15:576,48,0	0/0:26,0:26:69.23:0,69,966	0/0:20,0:20:60.19:0,60,823	0/0:15,0:15:39.13:0,39,545	1/1:0,17:17:51.16:611,51,0	1/1:1,20:21:57.11:663,57,0	1/1:0,18:18:45.14:540,45,0	0/0:36,0:36:99:0,99,1370	0/0:18,0:18:54.17:0,54,739	0/0:15,0:15:42.14:0,42,588	1/1:0,30:30:84.26:1008,84,0	1/1:3,26:29:78.24:935,78,0	1/1:1,26:27:75.23:900,75,0	1/1:0,6:6:18.06:216,18,0
chr10	55515040	.	C	CGT	1214.94	PASS	AB=0.589;AC=2;AF=0.036;AN=56;BaseQRankSum=-8.884;DP=698;FS=4.394;HRun=0;HaplotypeScore=123.2031;InbreedingCoeff=0.3383;MQ=68.40;MQ0=2;MQRankSum=1.673;QD=25.31;ReadPosRankSum=-4.050;VQSLOD=3.3656;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:27:53.95:0,54,598	0/1:2,6:8:0.95:224,0,1	0/0:39,0:28:35.71:0,36,357	0/0:36,0:29:45.18:0,45,461	0/0:25,0:27:68.86:0,69,778	0/0:21,0:21:48.13:0,48,568	0/0:23,0:23:47.12:0,47,613	0/1:14,25:40:21.80:1080,0,22	0/0:24,0:24:51.15:0,51,619	0/0:26,0:26:69.20:0,69,827	0/0:19,0:20:56.99:0,57,655	0/0:21,0:21:42.13:0,42,506	0/0:26,0:27:63:0,63,728	0/0:28,0:28:75.23:0,75,908	0/0:17,0:17:45.13:0,45,534	0/0:27,0:27:60.18:0,60,728	0/0:29,0:29:66.03:0,66,778	0/0:11,0:12:29.72:0,30,321	0/0:22,0:22:48.09:0,48,546	0/0:17,0:18:41.96:0,42,485	0/0:27,0:27:54.17:0,54,655	0/0:25,0:25:48.15:0,48,582	0/0:26,0:28:60.01:0,60,702	0/0:24,0:25:69.03:0,69,803	0/0:30,0:30:78.14:0,78,888	0/0:42,0:42:99:0,102,1220	0/0:22,0:22:45.14:0,45,545	0/0:7,0:7:21.06:0,21,255
chr10	55517516	.	T	TG	15484.92	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-17.355;DP=780;FS=0.838;HRun=1;HaplotypeScore=73.8694;InbreedingCoeff=0.9957;MQ=80.04;MQ0=0;MQRankSum=-2.588;QD=41.74;ReadPosRankSum=2.267;VQSLOD=5.3262;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:96.29:0,96,1230	0/0:4,0:4:12.04:0,12,156	0/0:21,0:21:48.62:0,49,611	0/0:23,0:23:29.08:0,29,648	0/0:23,0:23:66.19:0,66,841	1/1:0,19:19:57.19:854,57,0	1/1:1,32:33:87.29:1304,87,0	0/0:40,0:40:99:0,114,1469	1/1:2,32:34:90.30:1349,90,0	1/1:0,24:24:72.22:1050,72,0	1/1:0,17:17:51.17:764,51,0	0/0:30,0:30:90.29:0,90,1168	0/0:27,0:27:81.26:0,81,1051	0/0:42,0:42:99:0,123,1582	1/1:0,34:34:96.33:1438,96,0	0/0:30,0:30:90.29:0,90,1169	0/0:45,0:45:99:0,135,1752	0/0:21,0:21:63.20:0,63,818	1/1:0,28:28:81.27:1203,81,0	1/1:0,28:28:75.25:1120,75,0	1/1:0,55:55:99:2382,160,0	0/0:26,0:26:72.22:0,72,920	0/0:18,0:18:48.16:0,48,622	0/0:24,0:24:69.21:0,69,881	1/1:1,25:26:75.25:1124,75,0	1/1:1,24:25:66.21:966,66,0	1/1:0,32:32:90.14:1349,90,0	1/1:0,16:16:39.13:584,39,0
chr10	55518869	.	ATCAT	A	2039.46	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.927;DP=768;FS=3.810;HRun=0;HaplotypeScore=122.9246;InbreedingCoeff=0.9979;MQ=84.12;MQ0=1;MQRankSum=-5.731;QD=42.49;ReadPosRankSum=-2.730;VQSLOD=3.4919;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:61,0:61:99:0,178,4685	1/1:1,7:8:21.07:392,21,0	0/0:23,0:23:57.20:0,57,1449	0/0:28,0:25:69.24:0,69,1724	0/0:21,0:21:63.22:0,63,1638	0/0:23,0:23:69.24:0,69,1797	0/0:21,0:21:60.20:0,60,1534	1/1:7,33:40:99:1768,99,0	0/0:22,0:22:60.21:0,60,1600	0/0:31,0:31:90.31:0,90,2377	0/0:21,0:21:60.21:0,60,1599	0/0:25,0:25:66.23:0,66,1705	0/0:31,0:31:93.32:0,93,2458	0/0:35,0:35:93.32:0,93,2424	0/0:31,0:31:90.31:0,90,2358	0/0:36,0:36:99:0,108,2881	0/0:33,0:33:90.28:0,90,2283	0/0:14,0:14:42.14:0,42,1120	0/0:22,0:22:63.22:0,63,1616	0/0:23,0:23:66.18:0,66,1759	0/0:50,0:50:99:0,129,3441	0/0:25,0:25:75.24:0,75,1928	0/0:28,0:28:81.28:0,81,2120	0/0:31,0:30:84.25:0,84,2180	0/0:19,0:19:54.19:0,54,1441	0/0:23,0:23:69.24:0,69,1815	0/0:26,0:26:69.24:0,69,1840	0/0:17,0:17:51.13:0,51,1111
chr10	55522559	.	C	CTTACAGGGACCTGAGT	59363.96	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-3.200;DP=706;FS=0.000;HRun=0;HaplotypeScore=266.8191;InbreedingCoeff=0.9991;MQ=67.22;MQ0=2;MQRankSum=-20.326;QD=179.35;ReadPosRankSum=2.590;VQSLOD=4.7372;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,120,5489	0/0:9,0:9:27.09:0,27,1290	0/0:14,0:14:20.56:0,21,898	0/0:17,0:17:35.95:0,36,1093	0/0:28,0:28:81.26:0,81,3741	1/1:12,8:22:57.20:4150,57,0	1/1:13,17:32:81.28:5912,81,0	0/0:31,0:31:84.29:0,84,3580	1/1:12,17:31:78.27:5971,78,0	1/1:16,8:27:78.27:5041,78,0	1/1:7,8:18:36.08:2567,36,0	0/0:36,0:36:99:0,108,4869	0/0:33,0:33:96.33:0,96,4283	0/0:28,0:28:84.29:0,84,3893	1/1:16,14:32:87.30:6355,87,0	0/0:28,0:28:84.29:0,84,3925	0/0:20,0:20:57.17:0,57,2415	0/0:25,0:25:69.24:0,69,3177	1/1:13,3:19:54.17:2574,54,0	1/1:16,13:30:81.23:5907,81,0	1/1:13,2:16:33.11:1961,33,0	0/0:19,0:19:57.20:0,57,2545	0/0:21,0:21:60.21:0,60,2856	0/0:25,0:25:75.21:0,75,3246	1/1:11,8:22:45.11:3004,45,0	1/1:13,22:37:99:8222,111,0	1/1:17,9:30:71.91:5228,72,0	1/1:6,6:12:36.12:2472,36,0
chr10	55522764	.	A	AC	11196.57	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-14.217;DP=702;FS=1.626;HRun=5;HaplotypeScore=67.6837;InbreedingCoeff=0.9993;MQ=76.34;MQ0=0;MQRankSum=-2.897;QD=34.03;ReadPosRankSum=1.804;VQSLOD=5.2556;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,147,1551	0/0:11,0:11:33.08:0,33,355	0/0:16,0:16:20.14:0,20,256	0/0:22,0:21:44.98:0,45,423	0/0:20,0:20:54.13:0,54,573	1/1:2,16:18:39.13:513,39,0	1/1:3,30:33:81.26:1066,81,0	0/0:30,0:30:69.04:0,69,707	1/1:3,23:26:63.20:828,63,0	1/1:2,28:30:84.27:1105,84,0	1/1:1,22:23:63.20:823,63,0	0/0:22,0:22:63.15:0,63,671	0/0:24,0:24:66.12:0,66,689	0/0:23,0:23:60.15:0,60,644	1/1:1,16:17:45.15:592,45,0	0/0:30,0:30:78.18:0,78,831	0/0:28,0:28:78.19:0,78,838	0/0:21,0:21:63.16:0,63,677	1/1:4,25:29:72.23:947,72,0	1/1:4,23:27:66.16:848,66,0	1/1:4,35:39:99:1301,99,0	0/0:22,0:22:63.16:0,63,677	0/0:25,0:25:75.17:0,75,798	0/0:28,0:28:84.21:0,84,903	1/1:2,21:23:57.19:750,57,0	1/1:0,21:21:63.14:792,63,0	1/1:0,30:29:87.22:1123,87,0	1/1:0,13:13:39.13:509,39,0
chr10	55522992	.	CTA	C	12643.36	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=16.053;DP=708;FS=1.594;HRun=0;HaplotypeScore=83.4469;InbreedingCoeff=0.9998;MQ=81.96;MQ0=0;MQRankSum=-1.522;QD=42.86;ReadPosRankSum=2.635;VQSLOD=6.6351;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,147,2909	0/0:17,0:17:51.11:0,51,957	0/0:24,0:24:63.69:0,64,1261	0/0:22,0:22:63.21:0,63,1221	0/0:23,0:23:69.24:0,69,1385	1/1:0,17:17:48.16:783,48,0	1/1:0,31:31:81.28:1321,81,0	0/0:30,0:30:90.27:0,90,1768	1/1:1,20:21:60.20:968,60,0	1/1:0,33:33:96.33:1566,96,0	1/1:0,17:17:51.17:832,51,0	0/0:31,0:31:93.30:0,93,1851	0/0:28,0:28:84.25:0,84,1632	0/0:21,0:21:63.22:0,63,1270	1/1:0,32:32:84.29:1370,84,0	0/0:23,0:23:69.24:0,69,1402	0/0:40,0:40:99:0,120,2280	0/0:24,0:24:72.25:0,72,1459	1/1:0,15:15:45.13:685,45,0	1/1:1,22:23:57.07:845,57,0	1/1:0,36:36:75.26:1223,75,0	0/0:17,0:17:51.18:0,51,1036	0/0:27,0:27:81.21:0,81,1519	0/0:37,0:37:99:0,111,2226	1/1:0,15:15:42.06:627,42,0	1/1:0,17:17:51.16:807,51,0	1/1:0,29:29:72.25:1174,72,0	1/1:0,9:9:27.09:440,27,0
chr10	55523715	.	A	AT	7296.85	PASS	AB=1.000;AC=27;AF=0.482;AN=56;BaseQRankSum=-14.415;DP=565;FS=0.000;HRun=9;HaplotypeScore=55.4428;InbreedingCoeff=0.9341;MQ=70.90;MQ0=0;MQRankSum=-1.693;QD=25.08;ReadPosRankSum=1.596;VQSLOD=5.4529;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:71.96:0,72,620	0/0:1,0:10:14.25:0,14,41	0/0:9,0:9:20.57:0,21,164	0/1:10,0:11:2.53:3,0,75	0/0:34,0:34:89.94:0,90,772	1/1:3,17:20:28.09:538,28,0	1/1:2,15:17:19.07:439,19,0	0/0:5,0:26:41.33:0,41,124	1/1:4,18:22:51.14:563,51,0	1/1:5,18:23:51.09:538,51,0	1/1:2,27:29:52.48:791,52,0	0/0:18,0:18:41.98:0,42,364	0/0:17,1:18:8.76:0,9,300	0/0:17,0:17:44.97:0,45,387	1/1:1,21:21:63.17:697,63,0	0/0:18,1:19:17.80:0,18,383	0/0:19,0:19:50.96:0,51,439	0/0:31,0:31:83.93:0,84,719	1/1:5,11:16:33.05:345,33,0	1/1:5,20:25:13.98:585,14,0	1/1:2,8:11:18.63:210,19,0	0/0:15,0:15:38.99:0,39,338	0/0:21,0:21:53.98:0,54,469	0/0:11,0:11:26.93:0,27,222	1/1:5,20:25:57.15:630,57,0	1/1:3,24:28:51.99:785,52,0	1/1:2,35:37:93.25:1028,93,0	1/1:1,4:5:14.87:147,15,0
chr10	55525253	.	C	CA	13561.62	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-17.546;DP=694;FS=2.791;HRun=0;HaplotypeScore=60.7829;InbreedingCoeff=0.9997;MQ=83.14;MQ0=0;MQRankSum=-2.647;QD=41.99;ReadPosRankSum=3.736;VQSLOD=5.5576;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:84.28:0,84,1166	0/0:10,0:10:27.09:0,27,378	0/0:23,0:23:53.84:0,54,717	0/0:20,0:19:48.81:0,49,612	0/0:28,0:28:84.27:0,84,1156	1/1:2,29:31:75.26:1199,75,0	1/1:1,21:22:51.17:815,51,0	0/0:34,0:34:99:0,102,1410	1/1:0,23:23:57.19:911,57,0	1/1:1,38:39:99:1783,114,0	1/1:0,19:19:51.17:814,51,0	0/0:29,0:29:87.29:0,87,1216	0/0:24,0:24:66.22:0,66,920	0/0:31,0:31:90.30:0,90,1256	1/1:0,25:25:63.21:1007,63,0	0/0:21,0:21:63.21:0,63,879	0/0:31,0:31:93.31:0,93,1300	0/0:22,0:22:63.21:0,63,881	1/1:0,9:9:27.09:427,27,0	1/1:1,23:24:66.22:1040,66,0	1/1:0,24:24:63.21:1007,63,0	0/0:27,0:27:81.26:0,81,1116	0/0:19,0:19:57.14:0,57,763	0/0:24,0:24:72.23:0,72,989	1/1:0,24:24:54.18:861,54,0	1/1:0,27:27:81.21:1264,81,0	1/1:1,39:40:99:1810,114,0	1/1:0,16:16:39.13:623,39,0
chr10	55528427	.	GTC	G	4223.53	PASS	AB=0.989;AC=21;AF=0.375;AN=56;BaseQRankSum=-0.790;DP=818;FS=1.433;HRun=0;HaplotypeScore=138.6152;InbreedingCoeff=0.6511;MQ=53.69;MQ0=34;MQRankSum=4.163;QD=11.20;ReadPosRankSum=4.697;VQSLOD=4.5738;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,30:47:18.94:625,19,0	0/0:9,0:16:29.94:0,30,269	0/0:47,0:10:6.03:0,6,155	0/1:67,0:13:6.68:7,0,42	1/1:10,21:31:19.64:513,20,0	0/0:23,0:25:16.86:0,17,182	0/0:14,0:14:3.12:0,3,7	0/0:34,0:46:37.30:0,37,308	0/0:10,0:24:3.01:0,3,37	0/0:26,0:26:32.98:0,33,366	0/1:8,0:20:0.43:1,0,0	1/1:6,19:25:44.76:501,45,0	0/0:30,2:32:2.75:0,3,927	0/1:28,1:29:7.04:7,0,769	0/0:11,0:29:9:0,9,95	1/1:3,22:26:40.93:457,41,0	1/1:8,12:19:29.59:304,30,0	1/1:11,19:30:48.14:557,48,0	0/0:21,0:18:1.53:0,2,65	0/0:9,0:15:6.06:0,6,44	0/0:39,0:39:8.99:0,9,87	1/1:8,17:26:35.69:397,36,0	1/1:7,5:13:17.63:188,18,0	1/1:11,26:40:62.57:668,63,0	0/0:19,0:32:3:0,3,25	0/0:39,0:40:61.12:0,61,469	0/0:16,0:27:23.04:0,23,174	0/0:7,0:5:2.96:0,3,19
chr10	55531764	.	G	GTCA	13214.13	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-13.488;DP=589;FS=20.615;HRun=0;HaplotypeScore=98.0285;InbreedingCoeff=0.9906;MQ=80.59;MQ0=1;MQRankSum=-4.744;QD=50.05;ReadPosRankSum=3.565;VQSLOD=5.2157;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:57.19:0,57,914	0/0:6,0:6:18.06:0,18,294	0/0:30,0:29:65.94:0,66,1064	0/0:30,0:21:45.43:0,45,651	0/0:22,0:22:48.16:0,48,784	1/1:6,19:25:39.13:871,39,0	1/1:5,25:29:75.26:1654,75,0	0/0:28,0:28:81.27:0,81,1290	1/1:4,19:25:54.19:1204,54,0	1/1:5,10:15:36.11:761,36,0	1/1:2,19:21:51.17:1125,51,0	0/0:24,0:24:66.23:0,66,1077	0/0:23,0:23:57.19:0,57,918	0/0:11,0:11:30.10:0,30,487	1/1:3,15:18:45.15:1004,45,0	0/0:25,0:24:72.22:0,72,1149	0/0:21,0:21:62.58:0,63,979	0/0:23,0:23:60.20:0,60,979	1/1:3,15:18:48.16:1049,48,0	1/1:2,18:20:39.13:870,39,0	1/1:0,12:13:27.09:571,27,0	0/0:21,0:21:63.22:0,63,1025	0/0:14,0:14:36.12:0,36,563	0/0:25,0:25:57.19:0,57,927	1/1:3,15:20:36.12:803,36,0	1/1:3,24:27:69.22:1497,69,0	1/1:2,27:29:72.25:1605,72,0	1/1:0,3:3:9.03:201,9,0
chr10	55531787	.	CGAGAGAGAGAGAGA	C	344.26	PASS	AB=0.928;AC=8;AF=0.190;AN=42;BaseQRankSum=3.320;DP=570;FS=7.172;HRun=0;HaplotypeScore=227.4643;InbreedingCoeff=0.2492;MQ=65.03;MQ0=17;MQRankSum=-1.149;QD=3.28;ReadPosRankSum=0.011;VQSLOD=1.7711;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/0:8,0:8:5.98:0,6,163	./.	./.	1/1:19,0:19:3:61,3,0	0/0:21,0:21:2.98:0,3,21	0/0:26,0:25:9.03:0,9,160	0/0:32,0:32:14.08:0,14,173	./.	0/0:15,0:14:14.73:0,15,130	0/0:20,0:20:3:0,3,25	0/1:21,0:23:30.67:42,0,31	0/0:22,0:21:20.56:0,21,736	0/0:12,0:10:6.02:0,6,281	1/1:16,1:17:6.02:165,6,0	./.	0/0:20,0:22:6.89:0,7,112	./.	0/0:20,0:21:0.98:0,1,87	0/0:25,0:24:6.49:0,6,160	./.	0/0:21,0:21:3.01:0,3,51	0/0:11,0:11:6.02:0,6,132	0/1:27,2:28:21.59:22,0,46	1/1:15,1:15:6.02:172,6,0	0/0:17,0:17:8.06:0,8,88	0/0:23,0:22:9.03:0,9,154	0/0:4,0:4:2.99:0,3,23
chr10	55538370	.	GCTT	G	7242.76	PASS	AB=1.000;AC=27;AF=0.482;AN=56;BaseQRankSum=9.245;DP=792;FS=7.486;HRun=0;HaplotypeScore=181.1441;InbreedingCoeff=0.9282;MQ=66.84;MQ0=5;MQRankSum=-4.512;QD=21.24;ReadPosRankSum=2.346;VQSLOD=4.3611;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:41:15.56:0,16,456	0/1:12,0:12:16.23:16,0,56	0/0:30,0:23:39.32:0,39,439	0/0:30,0:25:55.80:0,56,580	0/0:20,0:20:56.90:0,57,530	1/1:12,5:17:44.85:416,45,0	1/1:33,0:33:98.17:736,98,0	0/0:32,0:32:93.13:0,93,951	1/1:12,9:21:55.27:510,55,0	1/1:32,4:35:95.52:865,96,0	1/1:20,1:21:56.61:451,57,0	0/0:27,0:27:59.20:0,59,580	0/0:28,0:28:59.14:0,59,880	0/0:38,0:38:99:0,111,1594	1/1:24,11:35:95.47:849,95,0	0/0:44,0:44:79.68:0,80,941	0/0:24,0:24:59.76:0,60,533	0/0:23,0:23:50.85:0,51,475	1/1:17,1:17:50.78:419,51,0	1/1:22,7:29:64.05:526,64,0	1/1:34,0:33:74.13:516,74,0	0/0:27,0:27:68.87:0,69,701	0/0:36,0:36:78.31:0,78,704	0/0:49,0:49:85.86:0,86,739	1/1:17,3:20:52.47:416,52,0	1/1:30,2:32:77.56:636,78,0	1/1:9,9:18:51.89:485,52,0	1/1:9,6:15:41.86:404,42,0
chr10	55538374	.	C	CTTGTTGTTG	3662.82	PASS	AB=0.837;AC=18;AF=0.375;AN=48;BaseQRankSum=-6.393;DP=815;FS=4.378;HRun=0;HaplotypeScore=278.0098;InbreedingCoeff=0.5123;MQ=62.95;MQ0=8;MQRankSum=-2.400;QD=9.79;ReadPosRankSum=-3.814;VQSLOD=1.8511;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:21,0:40:44.89:196,0,45	0/1:13,0:13:14.95:15,0,143	./.	./.	1/1:13,11:25:23.14:443,23,0	0/0:15,0:15:15.02:0,15,235	./.	0/1:35,0:35:7.27:7,0,78	0/0:20,0:20:21.07:0,21,435	0/0:37,0:36:11.62:0,12,248	0/0:24,0:24:3.01:0,3,49	1/1:15,15:32:15.05:674,15,0	0/0:23,0:25:36.04:0,36,703	0/0:39,0:39:54.15:0,54,1263	0/0:33,0:33:27:0,27,445	0/1:24,0:48:34.82:497,0,35	1/1:17,9:30:12.04:466,12,0	1/1:15,12:28:9.03:331,9,0	0/0:19,0:16:3.01:0,3,62	0/0:27,0:27:8.95:0,9,166	./.	1/1:19,11:32:19.53:407,20,0	1/1:25,13:38:9.04:220,9,0	1/1:26,23:51:10.28:407,10,0	0/0:19,0:19:3:0,3,62	0/0:32,0:32:9.02:0,9,158	0/0:17,0:17:23.97:0,24,350	0/0:14,0:14:18.06:0,18,373
chr10	55538411	.	TTGTTGTTGCTGCTGCTGC	T	16478.16	PASS	AC=26;AF=0.500;AN=52;BaseQRankSum=13.347;DP=649;FS=9.698;HRun=0;HaplotypeScore=309.8883;InbreedingCoeff=0.9830;MQ=48.85;MQ0=10;MQRankSum=-7.479;QD=72.91;ReadPosRankSum=3.835;VQSLOD=3.3438;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:47:75.24:0,75,3231	0/0:10,0:11:24.08:0,24,718	./.	./.	0/0:26,0:25:41.42:0,41,1925	1/1:10,5:14:42.12:1435,42,0	1/1:17,0:17:48:1082,48,0	0/0:30,0:29:76.14:0,76,2157	1/1:11,9:19:57.20:2066,57,0	1/1:26,4:30:68.81:2044,69,0	1/1:13,1:14:6:168,6,0	0/0:33,0:33:57.67:0,58,2825	0/0:29,0:29:81.26:0,81,3989	0/0:40,0:40:99:0,120,7164	1/1:12,11:23:69.24:2375,69,0	0/0:38,0:38:63.64:0,64,3538	0/0:27,0:27:57.20:0,57,2464	0/0:21,0:21:30.10:0,30,1370	1/1:11,1:11:23.83:636,24,0	1/1:13,7:20:24.06:889,24,0	1/1:23,0:21:23.89:692,24,0	0/0:25,0:25:51.11:0,51,2097	0/0:31,0:31:56.90:0,57,1950	0/0:51,0:51:69.11:0,69,3036	1/1:8,3:10:27.09:765,27,0	1/1:14,2:16:33.97:1341,34,0	1/1:3,9:12:36.12:1562,36,0	1/1:7,6:13:39.13:1423,39,0
chr10	55538617	.	G	GTGGT	16250.11	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=10.194;DP=849;FS=7.833;HRun=0;HaplotypeScore=159.5010;InbreedingCoeff=0.9980;MQ=67.92;MQ0=2;MQRankSum=-9.911;QD=41.99;ReadPosRankSum=-2.784;VQSLOD=4.2224;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:95.77:0,96,1548	1/1:3,5:8:18.06:410,18,0	0/0:45,0:41:65.28:0,65,949	0/0:39,0:35:48.96:0,49,691	0/0:25,0:25:42.13:0,42,683	1/1:11,13:25:41.47:1039,41,0	1/1:3,11:14:36.08:838,36,0	1/1:11,19:34:69.21:1487,69,0	1/1:7,23:31:66.05:1576,66,0	1/1:10,24:34:78.27:1770,78,0	1/1:10,10:20:27.09:666,27,0	0/0:35,0:35:96.33:0,96,1612	0/0:35,0:35:72.23:0,72,1180	0/0:47,0:47:99:0,114,1783	1/1:6,23:29:60.21:1492,60,0	0/0:41,0:41:93.32:0,93,1553	0/0:38,0:38:99:0,108,1787	0/0:34,0:34:96.33:0,96,1618	1/1:18,12:29:51.15:943,51,0	1/1:10,9:20:27.05:607,27,0	1/1:15,25:39:45.07:1010,45,0	0/0:16,0:16:36.12:0,36,588	0/0:25,0:25:60.19:0,60,987	0/0:40,0:40:99:0,102,1682	1/1:8,17:27:42.14:1044,42,0	1/1:10,24:36:69.69:1579,70,0	1/1:4,19:24:51.17:1266,51,0	1/1:4,11:15:21.07:522,21,0
chr10	55538914	.	T	TG	11628.60	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-15.321;DP=677;FS=9.999;HRun=3;HaplotypeScore=64.8197;InbreedingCoeff=0.9977;MQ=82.92;MQ0=0;MQRankSum=-2.233;QD=36.34;ReadPosRankSum=1.997;VQSLOD=5.0984;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,117,1392	0/0:6,0:6:15.05:0,15,180	0/0:16,0:16:42.08:0,42,480	0/0:22,0:22:35.78:0,36,579	0/0:21,0:21:63.19:0,63,756	1/1:0,23:23:57.19:798,57,0	1/1:2,27:29:69.23:966,69,0	0/0:22,0:22:60.17:0,60,710	1/1:2,22:24:63.21:882,63,0	1/1:1,19:20:57.18:779,57,0	1/1:1,19:20:45.11:607,45,0	0/0:33,0:33:96.29:0,96,1151	0/0:25,0:25:69.21:0,69,827	0/0:27,0:27:78.24:0,78,936	1/1:0,31:31:87.29:1219,87,0	0/0:35,0:35:99:0,99,1164	0/0:30,0:30:87.27:0,87,1043	0/0:26,0:26:75.20:0,75,886	1/1:2,17:19:51.14:693,51,0	1/1:1,22:23:57.19:798,57,0	1/1:0,47:47:99:1849,133,0	0/0:13,0:13:36.10:0,36,420	0/0:20,0:20:54.15:0,54,637	0/0:17,0:17:39.11:0,39,457	1/1:1,27:28:66.22:924,66,0	1/1:1,24:25:66.20:895,66,0	1/1:2,19:21:57.19:798,57,0	1/1:0,10:10:30.10:420,30,0
chr10	55539875	.	G	GT	6489.31	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-10.381;DP=545;FS=5.499;HRun=8;HaplotypeScore=48.4249;InbreedingCoeff=0.9370;MQ=59.24;MQ0=11;MQRankSum=0.355;QD=27.61;ReadPosRankSum=-1.024;VQSLOD=5.0293;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:63.03:0,63,576	0/0:8,0:8:24:0,24,215	0/0:31,0:4:2.73:0,3,25	0/0:27,0:8:0.01:0,0,98	0/0:36,0:36:90.04:0,90,823	1/1:3,19:22:53.91:585,54,0	1/1:1,22:22:60.18:692,60,0	0/0:22,0:22:38.99:0,39,357	1/1:1,11:12:30.09:346,30,0	1/1:2,14:16:36.11:415,36,0	1/1:2,20:22:56.80:619,57,0	0/0:18,0:18:51.03:0,51,467	0/0:11,0:11:30.01:0,30,275	0/0:21,0:21:57.03:0,57,521	1/1:2,14:16:36.11:415,36,0	0/0:13,0:13:33:0,33,295	0/0:24,0:24:69.01:0,69,625	0/0:18,0:17:48.02:0,48,438	1/1:5,10:15:30.09:346,30,0	1/1:2,13:16:42.03:451,42,0	1/1:2,19:20:48.14:554,48,0	0/0:15,0:15:20.60:0,21,360	0/0:14,0:13:36.01:0,36,325	0/0:30,0:30:78.03:0,78,709	1/1:0,12:12:33.10:381,33,0	1/1:5,24:30:77.95:840,78,0	1/1:0,21:22:57.17:658,57,0	1/1:2,5:7:17.84:187,18,0
chr10	55545423	.	C	CCT	16492.46	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-16.904;DP=620;FS=2.087;HRun=0;HaplotypeScore=66.4286;InbreedingCoeff=0.9996;MQ=82.57;MQ0=2;MQRankSum=-1.261;QD=55.91;ReadPosRankSum=0.431;VQSLOD=4.8533;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,117,1883	1/1:0,8:9:24.08:486,24,0	0/0:20,0:20:57.17:0,57,878	0/0:24,0:24:63.18:0,63,960	0/0:29,0:29:87.30:0,87,1413	1/1:0,19:19:57.20:1158,57,0	1/1:0,16:16:42.14:853,42,0	1/1:0,26:27:81.26:1601,81,0	1/1:0,23:22:63.22:1280,63,0	1/1:1,18:21:60.19:1161,60,0	1/1:0,10:10:30.10:609,30,0	0/0:16,0:16:48.15:0,48,758	0/0:19,0:19:57.18:0,57,905	0/0:21,0:21:63.21:0,63,1005	1/1:0,16:16:48.16:974,48,0	0/0:25,0:25:75.24:0,75,1195	0/0:43,1:44:71.48:0,71,2009	0/0:33,0:33:96.26:0,96,1499	1/1:2,16:19:57.17:1066,57,0	1/1:0,25:26:72.25:1393,72,0	1/1:1,32:33:78.27:1583,78,0	0/0:15,0:15:42.14:0,42,685	0/0:16,0:16:48.16:0,48,776	0/0:24,0:24:72.20:0,72,1141	1/1:0,16:16:45.15:914,45,0	1/1:0,23:23:69.23:1345,69,0	1/1:1,21:22:66.23:1338,66,0	1/1:0,14:14:36.12:731,36,0
chr10	55546941	.	T	TG	5546.68	PASS	AB=0.663;AC=13;AF=0.232;AN=56;BaseQRankSum=10.828;DP=694;FS=1.991;HRun=0;HaplotypeScore=131.1271;InbreedingCoeff=-0.2587;MQ=55.95;MQ0=9;MQRankSum=-8.731;QD=22.01;ReadPosRankSum=1.780;VQSLOD=5.8491;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,144,1988	0/0:8,0:8:24.08:0,24,335	0/0:39,0:13:8.37:0,8,330	0/0:40,0:23:56.53:0,57,714	0/0:21,0:21:60.20:0,60,833	0/1:7,9:16:91.47:400,0,91	0/1:11,10:21:99:457,0,124	0/0:39,0:39:99:0,111,1486	0/1:13,14:27:44.98:614,0,45	0/1:8,17:25:6.82:783,0,7	0/1:9,6:14:99:241,0,117	0/0:19,0:19:57.18:0,57,780	0/0:22,0:22:63.21:0,63,879	0/0:31,0:31:90.29:0,90,1241	0/1:14,13:27:99:614,0,160	0/0:23,0:23:66.22:0,66,921	0/0:38,0:38:99:0,108,1470	0/0:25,0:25:61.68:0,62,992	0/1:17,7:23:99:328,0,203	0/1:8,8:17:50.39:330,0,50	0/1:8,9:17:76.10:291,0,76	0/0:26,0:26:72.21:0,72,971	0/0:12,0:12:33.11:0,33,461	0/0:47,0:47:99:0,135,1819	0/1:10,9:17:59.86:399,0,60	0/1:9,11:20:84.61:507,0,85	0/1:10,11:20:50.90:542,0,51	0/1:1,2:3:8.82:42,0,9
chr10	55546955	.	TG	T	2725.76	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=17.159;DP=703;FS=3.683;HRun=1;HaplotypeScore=126.4344;InbreedingCoeff=0.9976;MQ=57.25;MQ0=6;MQRankSum=-11.587;QD=10.82;ReadPosRankSum=-6.408;VQSLOD=-0.7019;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:57:99:0,130,1662	0/0:7,0:7:20.97:0,21,207	0/0:27,0:14:22.68:0,23,256	0/0:30,3:22:43.02:0,43,488	0/0:22,0:22:62.38:0,62,572	1/1:16,0:16:35.02:180,35,0	1/1:21,0:21:41.56:233,42,0	0/0:38,0:38:99:0,114,1202	1/1:20,0:20:39.99:195,40,0	1/1:23,1:24:49.19:241,49,0	1/1:19,0:18:39.17:240,39,0	0/0:17,0:17:51.10:0,51,564	0/0:26,0:26:74.46:0,74,775	0/0:34,0:34:95.15:0,95,953	1/1:29,1:30:54.87:330,55,0	0/0:25,0:25:75.16:0,75,852	0/0:42,0:42:99:0,123,1322	0/0:31,0:31:93.13:0,93,1015	1/1:21,1:21:44.44:304,44,0	1/1:18,0:18:22.77:153,23,0	1/1:16,1:17:41.25:264,41,0	0/0:30,0:30:86.27:0,86,876	0/0:14,0:14:39:0,39,404	0/0:48,0:48:99:0,141,1538	1/1:11,5:14:27.70:165,28,0	1/1:20,1:21:42.51:284,43,0	1/1:19,0:18:38.34:253,38,0	1/1:9,0:9:19.13:117,19,0
chr10	55547233	.	TACACACACACACACACACACACACACACACACAC	T	4394.82	PASS	AB=0.833;AC=21;AF=0.389;AN=54;BaseQRankSum=3.949;DP=455;FS=14.214;HRun=0;HaplotypeScore=327.1309;InbreedingCoeff=0.6510;MQ=63.48;MQ0=15;MQRankSum=-1.133;QD=26.16;ReadPosRankSum=2.665;VQSLOD=1.4432;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:24:24.07:0,24,2044	0/0:2,0:6:5.95:0,6,246	0/0:22,0:18:4.03:0,4,663	0/0:18,0:12:21.07:0,21,1111	0/0:12,0:18:30.10:0,30,2830	1/1:11,3:13:3.01:259,3,0	1/1:11,0:10:2.96:20,3,0	0/0:20,0:19:39.13:0,39,2676	1/1:8,5:12:6.02:518,6,0	1/1:14,0:14:15.02:240,15,0	0/1:7,7:12:15.99:270,0,16	0/0:13,0:13:21.07:0,21,1446	0/0:14,0:14:32.69:0,33,4477	0/0:19,0:17:31.48:0,31,3576	1/1:10,6:15:9.03:777,9,0	0/0:10,0:16:27.06:0,27,2070	0/0:16,0:18:30.10:0,30,2872	0/0:18,0:23:42.14:0,42,3803	./.	1/1:15,0:14:8.99:160,9,0	0/1:11,0:11:0:0,0,0	0/0:14,0:20:18.53:0,19,1277	0/0:16,0:17:36.12:0,36,2622	0/0:19,0:28:26.29:0,26,1586	0/1:12,3:14:13.95:509,0,14	1/1:12,6:17:15.01:607,15,0	1/1:15,6:21:9.03:777,9,0	1/1:3,3:5:3.01:259,3,0
chr10	55547256	.	A	AG	71.66	PASS	AB=1.000;AC=7;AF=0.140;AN=50;BaseQRankSum=3.240;DP=366;FS=1.757;HRun=0;HaplotypeScore=88.6920;InbreedingCoeff=0.5176;MQ=46.93;MQ0=28;MQRankSum=-0.031;QD=2.99;ReadPosRankSum=0.019;VQSLOD=2.7969;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:28:34.62:0,35,474	0/0:7,0:7:8.72:0,9,73	0/0:11,0:7:15.94:0,16,209	0/0:17,0:10:30.10:0,30,408	0/0:19,0:18:41.61:0,42,479	1/1:4,0:3:2.80:13,3,0	./.	0/0:30,0:28:81.27:0,81,1120	0/0:8,0:6:4.44:0,4,14	1/1:2,0:2:6.02:88,6,0	0/0:8,0:6:2.22:0,2,7	0/0:16,0:16:30.10:0,30,414	0/0:21,0:21:51.11:0,51,658	0/0:21,0:19:45.39:0,45,619	0/0:8,0:6:6.66:0,7,21	0/0:19,0:19:35.78:0,36,395	0/0:21,0:21:45.04:0,45,589	0/0:21,0:19:50.85:0,51,626	./.	1/1:2,4:5:6.01:72,6,0	./.	0/0:21,0:19:20.80:0,21,261	0/0:18,0:16:35.59:0,36,437	0/0:30,0:30:44.15:0,44,503	0/0:3,0:2:4.44:0,4,14	0/1:12,0:8:13.54:14,0,45	0/0:7,0:6:6.66:0,7,21	0/0:3,0:2:2.22:0,2,7
chr10	55547558	.	CGTCCCTGTGGTGTGTGTACCCTGGGATAGTGAT	C	1637.78	PASS	AC=22;AF=0.423;AN=52;BaseQRankSum=6.492;DP=755;FS=2.144;HRun=0;HaplotypeScore=515.7522;InbreedingCoeff=0.8072;MQ=58.63;MQ0=15;MQRankSum=-3.333;QD=8.07;ReadPosRankSum=-0.550;VQSLOD=0.3322;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:78.14:0,78,3655	0/0:16,0:15:27.09:0,27,1185	0/0:32,0:9:3.01:0,3,73	0/0:35,0:20:3.37:0,3,18	0/0:21,0:21:39.13:0,39,1505	1/1:6,0:6:3.01:62,3,0	1/1:13,0:11:5.99:50,6,0	0/0:32,0:28:33.09:0,33,842	1/1:14,0:14:9.01:173,9,0	1/1:22,0:19:8.98:74,9,0	./.	0/0:53,0:53:99:0,111,5403	0/0:53,0:53:99:0,129,6211	0/0:49,0:49:99:0,117,5552	1/1:17,0:14:3.01:75,3,0	0/0:36,0:36:78.27:0,78,3876	0/0:42,0:42:99:0,105,5487	0/0:25,0:25:54.15:0,54,2631	1/1:10,12:19:32.81:513,33,0	1/1:4,13:16:15.04:233,15,0	1/1:41,0:32:2.39:19,2,0	0/0:24,0:24:51.01:0,51,2489	0/0:19,0:17:33.07:0,33,1553	0/0:55,0:55:99:0,108,6159	1/1:16,0:14:5.98:59,6,0	1/1:14,9:20:18:311,18,0	1/1:12,0:11:12:259,12,0	./.
chr10	55547581	.	GGGAT	G	496.41	PASS	AB=0.971;AC=11;AF=0.212;AN=52;BaseQRankSum=3.146;DP=678;FS=5.504;HRun=0;HaplotypeScore=109.7973;InbreedingCoeff=0.2846;MQ=58.77;MQ0=20;MQRankSum=-3.293;QD=6.13;ReadPosRankSum=-3.988;VQSLOD=0.3891;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,105,2973	0/0:14,0:12:27.03:0,27,689	0/0:46,0:7:18.06:0,18,438	0/0:34,0:9:13.72:0,14,169	0/0:21,0:21:48.03:0,48,1353	0/0:1,0:1:2.80:0,3,13	1/1:8,0:5:5.99:50,6,0	0/0:30,0:24:69.21:0,69,1733	1/1:6,3:7:9:78,9,0	0/1:8,0:5:61.87:62,0,73	./.	0/0:45,0:45:99:0,123,3400	0/0:58,0:58:99:0,172,4680	0/0:47,0:47:99:0,141,3929	0/1:15,0:7:43.80:44,0,79	0/0:34,0:34:99:0,99,2794	0/0:47,0:47:99:0,141,4047	0/0:26,0:26:75.22:0,75,2106	0/1:15,0:13:99:124,0,397	0/0:13,0:13:15.05:0,15,334	0/0:36,0:25:1.08:0,1,399	0/0:29,0:29:75.73:0,76,2122	0/0:22,0:20:51.13:0,51,1365	0/0:48,0:48:99:0,141,4073	1/1:9,1:9:5.98:59,6,0	0/1:10,0:8:99:113,0,152	0/1:5,1:5:74.70:115,0,75	./.
chr10	55547942	.	CTGAG	C	127.77	PASS	AB=0.857;AC=2;AF=0.045;AN=44;BaseQRankSum=0.719;DP=1876;DS;FS=0.000;HRun=0;HaplotypeScore=110.4308;InbreedingCoeff=0.1525;MQ=22.33;MQ0=813;MQRankSum=-0.336;QD=2.06;ReadPosRankSum=0.390;VQSLOD=1.9822;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:29:0:0,0,0	0/1:18,12:17:99:200,0,139	./.	./.	0/0:20,0:8:3.01:0,3,79	0/0:75,0:23:18.06:0,18,469	./.	./.	0/0:123,0:43:14.94:0,15,365	0/0:133,0:38:87.30:0,87,2168	0/0:51,0:17:8.90:0,9,235	0/0:61,0:35:3.01:0,3,59	0/0:54,0:27:9.84:0,10,153	0/0:64,0:42:11.99:0,12,152	0/0:156,0:41:30.10:0,30,782	0/0:45,0:30:3.01:0,3,80	./.	0/0:34,0:15:6.02:0,6,157	0/0:46,0:8:21.07:0,21,546	0/0:71,0:29:3.01:0,3,78	0/0:240,0:67:27.74:0,28,331	./.	0/0:17,0:7:3.01:0,3,78	0/1:32,0:16:0:0,0,0	0/0:65,0:31:24:0,24,432	0/0:105,0:20:42.11:0,42,1030	0/0:63,0:18:12.90:0,13,285	0/0:57,0:22:27.98:0,28,676
chr10	55548558	.	TG	T	13530.82	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=13.989;DP=881;FS=8.201;HRun=1;HaplotypeScore=95.2710;InbreedingCoeff=0.9994;MQ=73.58;MQ0=0;MQRankSum=-0.453;QD=36.28;ReadPosRankSum=-0.425;VQSLOD=4.3321;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:60,0:60:99:0,178,2732	0/0:20,0:20:57.19:0,57,882	0/0:22,0:21:62.07:0,62,928	0/0:17,1:18:44.65:0,45,729	0/0:20,0:20:33.11:0,33,511	1/1:0,11:10:21.07:293,21,0	1/1:0,28:28:81.27:1132,81,0	0/0:31,0:31:93.31:0,93,1467	1/1:0,36:36:93.31:1293,93,0	1/1:0,34:34:96.27:1304,96,0	1/1:0,23:23:51.17:713,51,0	0/0:36,0:36:99:0,108,1724	0/0:49,0:49:99:0,147,2310	0/0:57,0:57:99:0,169,2635	1/1:0,43:43:87.29:1216,87,0	0/0:43,0:43:99:0,129,2016	0/0:47,0:47:99:0,141,2251	0/0:25,0:25:75.26:0,75,1199	1/1:0,24:24:72.21:968,72,0	1/1:0,30:30:81.27:1123,81,0	1/1:0,67:67:99:2684,193,0	0/0:30,0:30:69.24:0,69,1102	0/0:17,0:17:33.11:0,33,527	0/0:33,0:33:99:0,99,1525	1/1:0,22:22:39.13:544,39,0	1/1:0,24:24:72.24:1005,72,0	1/1:0,14:14:39.13:541,39,0	1/1:0,17:17:51.17:713,51,0
chr10	55549745	.	AGGTTCCAAATT	A	2233.08	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.043;DP=673;FS=11.964;HRun=0;HaplotypeScore=209.9077;InbreedingCoeff=0.9987;MQ=79.67;MQ0=0;MQRankSum=-5.189;QD=67.67;ReadPosRankSum=-1.438;VQSLOD=1.8641;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,114,6393	1/1:0,9:9:24.08:870,24,0	0/0:18,0:18:51.18:0,51,2503	0/0:19,0:19:50.92:0,51,2355	0/0:32,0:32:93.30:0,93,4838	0/0:31,0:31:93.32:0,93,5044	0/0:28,0:28:81.28:0,81,4550	1/1:5,19:24:51.12:1484,51,0	0/0:28,0:28:81.28:0,81,4545	0/0:24,0:24:72.24:0,72,3839	0/0:28,0:28:81.26:0,81,4298	0/0:24,0:24:72.21:0,72,3396	0/0:30,0:30:87.29:0,87,4818	0/0:25,0:25:75.26:0,75,4306	0/0:25,0:25:75.24:0,75,4144	0/0:26,0:26:78.27:0,78,4419	0/0:27,0:27:81.24:0,81,4121	0/0:31,0:31:93.30:0,93,4899	0/0:21,0:21:63.22:0,63,3518	0/0:17,0:17:51.18:0,51,2671	0/0:33,0:33:99:0,99,5465	0/0:16,0:16:45.15:0,45,2480	0/0:10,0:10:30.10:0,30,1650	0/0:20,0:20:54.12:0,54,2580	0/0:20,0:20:60.19:0,60,3288	0/0:24,0:24:69.24:0,69,3915	0/0:31,0:31:93.32:0,93,5301	0/0:14,0:14:42.14:0,42,2235
chr10	55552319	.	TTTTG	T	10137.69	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=13.740;DP=633;FS=3.808;HRun=0;HaplotypeScore=113.1164;InbreedingCoeff=0.9927;MQ=74.85;MQ0=5;MQRankSum=-0.388;QD=38.26;ReadPosRankSum=3.478;VQSLOD=4.8022;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:69.17:0,69,1516	0/0:14,0:14:42.13:0,42,971	0/0:47,0:31:37.16:0,37,783	0/0:37,0:24:14.65:0,15,561	0/0:31,0:31:90.31:0,90,2187	1/1:3,17:20:42.14:722,42,0	1/1:0,16:16:36.12:618,36,0	0/0:34,0:34:93.17:0,93,2090	1/1:1,11:12:21.03:329,21,0	1/1:2,20:22:63.20:1044,63,0	1/1:2,17:18:39.05:607,39,0	0/0:17,0:17:51.14:0,51,1135	0/0:16,0:16:42.14:0,42,1047	0/0:16,0:16:48.15:0,48,1117	1/1:2,11:13:33.11:567,33,0	0/0:12,0:12:36.12:0,36,815	0/0:34,0:34:93.21:0,93,2102	0/0:22,0:22:57.20:0,57,1372	1/1:7,25:32:78.06:1115,78,0	1/1:4,29:33:84.24:1412,84,0	1/1:1,8:9:12.04:206,12,0	0/0:18,0:18:51.17:0,51,1212	0/0:22,0:22:63.22:0,63,1537	0/0:20,0:20:54.19:0,54,1327	1/1:3,23:26:51.13:845,51,0	1/1:4,20:24:60.17:952,60,0	1/1:2,20:22:57.15:948,57,0	1/1:2,15:17:45.15:772,45,0
chr10	55554480	.	A	AG	13576.38	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-3.575;DP=742;FS=26.810;HRun=0;HaplotypeScore=85.1900;InbreedingCoeff=0.9993;MQ=85.77;MQ0=1;MQRankSum=-5.348;QD=44.22;ReadPosRankSum=2.314;VQSLOD=2.7750;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,126,1753	0/0:17,0:17:45.15:0,45,625	0/0:30,0:30:61.82:0,62,1037	0/0:26,0:26:64.26:0,64,934	0/0:21,0:21:63.21:0,63,878	1/1:0,14:14:39.13:624,39,0	1/1:1,47:48:99:1919,120,0	0/0:32,0:31:81.27:0,81,1130	1/1:0,22:22:60.20:959,60,0	1/1:0,19:19:57.19:912,57,0	1/1:0,10:10:30.10:480,30,0	0/0:32,0:32:93.27:0,93,1246	0/0:24,0:24:72.24:0,72,1005	0/0:39,0:39:99:0,117,1636	1/1:0,27:27:72.25:1151,72,0	0/0:42,0:42:99:0,123,1696	0/0:40,0:40:99:0,117,1618	0/0:30,0:30:87.19:0,87,1152	1/1:1,21:22:63.21:998,63,0	1/1:0,12:12:36.12:576,36,0	1/1:2,61:63:99:2876,181,0	0/0:12,0:12:36.12:0,36,504	0/0:8,0:8:21.07:0,21,294	0/0:38,0:37:99:0,105,1448	1/1:0,15:15:39:623,39,0	1/1:1,28:29:84.29:1333,84,0	1/1:0,13:14:39.11:598,39,0	1/1:0,12:12:32.85:527,33,0
chr10	55555206	.	CA	C	1792.10	PASS	AB=0.788;AC=29;AF=0.518;AN=56;BaseQRankSum=7.702;DP=372;FS=4.560;HRun=11;HaplotypeScore=61.9414;InbreedingCoeff=0.6252;MQ=42.65;MQ0=21;MQRankSum=-8.004;QD=9.63;ReadPosRankSum=-1.414;VQSLOD=2.4283;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,1:20:7.67:0,8,240	1/1:0,3:3:5.99:49,6,0	0/0:16,0:3:5.99:0,6,52	0/0:29,0:7:2.07:0,2,13	0/0:11,1:11:26.89:0,27,264	1/1:6,6:10:14.95:122,15,0	1/1:5,3:7:8.97:74,9,0	1/1:5,19:20:6.98:260,7,0	0/1:7,6:12:25.43:59,0,25	1/1:10,8:17:23.91:196,24,0	1/1:5,5:10:11.97:98,12,0	0/0:10,0:9:12.03:0,12,128	0/0:8,0:8:12.03:0,12,128	0/0:8,0:7:12.03:0,12,126	1/1:5,4:7:2.98:25,3,0	0/0:7,0:6:12.03:0,12,127	0/0:32,0:31:63.10:0,63,652	0/0:27,0:25:54.09:0,54,563	1/1:0,8:8:23.97:196,24,0	0/1:9,8:15:3.35:83,0,3	1/1:0,2:2:5.99:49,6,0	0/0:6,0:6:3.01:0,3,32	0/1:9,0:9:13.39:13,0,55	0/0:10,0:7:9.02:0,9,96	1/1:7,9:16:20.93:172,21,0	1/1:4,8:12:12.45:181,12,0	1/1:5,6:10:17.94:147,18,0	1/1:2,12:13:32.91:265,33,0
chr10	55555229	.	AT	A	2615.69	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=10.297;DP=347;FS=15.932;HRun=2;HaplotypeScore=61.4278;InbreedingCoeff=0.8597;MQ=42.54;MQ0=11;MQRankSum=-10.012;QD=25.15;ReadPosRankSum=0.364;VQSLOD=2.0570;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:42.03:0,42,562	0/0:2,0:2:3.01:0,3,40	0/0:46,0:9:18.35:0,18,182	0/0:61,0:17:16.07:0,16,204	0/0:10,0:10:29.36:0,29,359	1/1:0,8:7:21.02:248,21,0	1/1:0,4:4:11.98:133,12,0	0/0:28,0:24:53.75:0,54,694	1/1:1,3:4:8.98:94,9,0	1/1:3,6:9:26.73:267,27,0	1/1:2,4:6:15.01:172,15,0	0/0:8,0:8:21.03:0,21,252	0/0:3,0:3:9.03:0,9,134	0/0:6,0:6:18.05:0,18,247	1/1:1,1:2:3.01:38,3,0	0/0:4,0:3:9.02:0,9,115	0/0:23,0:23:63.12:0,63,864	0/0:23,0:22:63.02:0,63,803	1/1:6,8:12:10.10:306,10,0	1/1:4,3:6:14.92:136,15,0	1/1:1,1:2:5.98:58,6,0	0/0:3,0:3:6.01:0,6,70	0/0:5,0:5:14.97:0,15,177	0/0:3,0:3:9.01:0,9,113	1/1:4,7:11:21.02:249,21,0	1/1:3,6:9:24:269,24,0	1/1:3,2:4:8.99:96,9,0	1/1:3,20:23:63.11:764,63,0
chr10	55555246	.	TA	T	2734.26	PASS	AB=0.615;AC=27;AF=0.500;AN=54;BaseQRankSum=7.842;DP=343;FS=18.245;HRun=10;HaplotypeScore=62.7961;InbreedingCoeff=0.8480;MQ=52.88;MQ0=9;MQRankSum=-5.660;QD=20.10;ReadPosRankSum=0.074;VQSLOD=2.5223;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:33.07:0,33,350	1/1:0,6:6:18:156,18,0	0/0:41,1:10:3.20:0,3,65	0/0:63,0:19:13.76:0,14,193	0/0:9,0:9:21.06:0,21,232	1/1:3,6:8:21:182,21,0	1/1:0,6:6:18:156,18,0	1/1:3,18:21:47.95:410,48,0	1/1:0,3:3:8.99:75,9,0	1/1:0,12:12:35.99:312,36,0	1/1:1,8:9:24:208,24,0	0/0:5,0:5:15.03:0,15,156	0/0:7,0:7:21.03:0,21,221	0/0:4,0:4:12.03:0,12,132	1/1:0,3:3:9:78,9,0	0/0:2,0:2:6.02:0,6,66	0/0:23,0:23:60.07:0,60,628	0/0:18,0:17:48.11:0,48,521	0/1:6,10:13:3.23:199,0,3	1/1:2,3:4:9:78,9,0	./.	0/0:5,0:5:12.03:0,12,133	0/0:7,0:7:15.03:0,15,157	0/0:4,0:4:9.02:0,9,100	1/1:1,8:9:20.99:182,21,0	1/1:1,8:9:23.99:208,24,0	1/1:0,4:4:9:78,9,0	1/1:0,24:24:71.99:623,72,0
chr10	55555749	.	A	ACTGGACTTACAGGCAGTTGTAAGCCACCC	45471	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=6.078;DP=560;FS=5.184;HRun=0;HaplotypeScore=380.0412;InbreedingCoeff=0.9964;MQ=78.72;MQ0=0;MQRankSum=-14.900;QD=211.49;ReadPosRankSum=-0.615;VQSLOD=3.7054;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,138,8296	1/1:6,0:6:18.06:1647,18,0	0/0:19,0:19:54.09:0,54,2211	0/0:17,0:17:45.15:0,45,2049	0/0:20,0:20:60.19:0,60,3591	1/1:3,2:9:18.06:2076,18,0	1/1:12,0:15:39.13:3583,39,0	1/1:19,0:19:48.12:2847,48,0	1/1:12,2:17:39.13:4647,39,0	1/1:13,1:18:51.15:4694,51,0	1/1:14,0:14:27.09:2378,27,0	0/0:33,0:33:96.33:0,96,6396	0/0:30,0:30:90.25:0,90,5974	0/0:31,0:31:90.31:0,90,5922	1/1:9,2:11:33.11:3671,33,0	0/0:30,0:30:87.30:0,87,5504	0/0:30,0:30:90.30:0,90,5361	0/0:21,0:21:63.15:0,63,3425	1/1:6,2:14:39.11:2383,39,0	1/1:15,0:17:42.07:2079,42,0	1/1:10,0:10:18.06:1669,18,0	0/0:14,0:14:42.14:0,42,3003	0/0:24,0:24:72.22:0,72,4478	0/0:29,0:29:84.29:0,84,5063	1/1:12,3:18:39.13:3756,39,0	1/1:14,1:20:45.15:3627,45,0	1/1:13,1:15:36.12:4394,36,0	1/1:12,0:12:33.05:2019,33,0
chr10	55555887	.	T	TA	939.47	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-7.558;DP=780;FS=2.790;HRun=1;HaplotypeScore=74.8145;InbreedingCoeff=0.9987;MQ=79.21;MQ0=0;MQRankSum=-1.085;QD=39.14;ReadPosRankSum=1.214;VQSLOD=4.3768;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,135,1734	0/0:9,0:9:27.09:0,27,351	0/0:27,0:27:75.24:0,75,969	0/0:17,0:17:45.11:0,45,550	0/0:21,0:21:63.20:0,63,816	0/0:22,0:22:54.16:0,54,686	0/0:22,0:22:63.20:0,63,818	0/0:32,0:32:87.28:0,87,1130	0/0:25,0:25:72.23:0,72,933	0/0:35,0:35:99:0,99,1265	0/0:19,0:19:54.16:0,54,686	0/0:39,0:39:99:0,117,1504	0/0:35,0:35:99:0,105,1330	0/0:43,0:43:99:0,126,1634	0/0:33,0:33:90.28:0,90,1152	1/1:0,24:24:69.23:1034,69,0	0/0:42,0:42:99:0,120,1541	0/0:31,0:31:93.30:0,93,1205	0/0:28,0:28:75.12:0,75,913	0/0:24,0:24:69.21:0,69,880	0/0:50,0:50:99:0,135,1739	0/0:22,0:22:66.21:0,66,855	0/0:13,0:13:36.12:0,36,467	0/0:25,0:25:75.24:0,75,973	0/0:18,0:17:51.17:0,51,662	0/0:34,0:34:99:0,99,1263	0/0:31,0:31:93.28:0,93,1175	0/0:12,0:12:36.12:0,36,467
chr10	55558685	.	C	CT	2212.36	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-9.118;DP=892;FS=5.898;HRun=1;HaplotypeScore=88.3808;InbreedingCoeff=0.9979;MQ=84.35;MQ0=0;MQRankSum=-2.675;QD=38.81;ReadPosRankSum=-3.729;VQSLOD=2.4029;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,153,1969	1/1:2,16:18:45.15:673,45,0	0/0:22,0:22:51.16:0,51,640	0/0:31,0:31:84.17:0,84,996	0/0:34,0:34:96.25:0,96,1216	0/0:23,0:23:69.21:0,69,882	0/0:28,0:28:84.27:0,84,1091	1/1:1,38:39:99:1661,114,0	0/0:29,0:29:87.28:0,87,1130	0/0:34,0:34:96.26:0,96,1202	0/0:23,0:23:66.21:0,66,854	0/0:43,0:43:99:0,123,1585	0/0:31,0:31:93.29:0,93,1193	0/0:45,0:45:99:0,129,1674	0/0:43,0:43:99:0,126,1608	0/0:38,0:38:99:0,111,1441	0/0:23,0:23:66.21:0,66,854	0/0:23,0:23:66.21:0,66,857	0/0:23,0:23:69.22:0,69,896	0/0:24,0:24:72.23:0,72,934	0/0:84,0:84:99:0,253,3240	0/0:21,0:21:60.18:0,60,766	0/0:16,0:16:48.16:0,48,623	0/0:40,0:40:99:0,117,1489	0/0:30,0:30:87.28:0,87,1129	0/0:37,0:37:99:0,105,1363	0/0:32,0:31:96.23:0,96,1224	0/0:7,0:7:21.07:0,21,273
chr10	55559143	.	T	TTG	469.98	PASS	AB=1.000;AC=21;AF=0.500;AN=42;BaseQRankSum=-2.571;DP=590;FS=12.325;HRun=0;HaplotypeScore=98.4338;InbreedingCoeff=0.2524;MQ=61.21;MQ0=14;MQRankSum=0.537;QD=1.58;ReadPosRankSum=-1.458;VQSLOD=0.3416;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:34,0:33:8.92:128,9,0	./.	./.	0/1:32,0:18:0:0,0,0	0/1:21,0:21:25.35:36,0,25	0/0:20,0:20:0:0,0,0	0/0:22,0:23:0:0,0,0	./.	0/0:17,0:18:8.52:0,9,42	1/1:27,0:27:0.06:0,0,0	0/1:10,0:10:0:0,0,0	1/1:18,4:24:6.02:87,6,0	0/0:20,0:20:3.44:0,3,33	./.	0/0:18,0:20:8.52:0,9,42	1/1:25,4:30:3.01:44,3,0	1/1:12,0:17:3:26,3,0	1/1:15,0:14:6:52,6,0	./.	0/0:19,0:22:2.84:0,3,14	0/0:30,0:28:0:0,0,0	1/1:8,0:12:11.85:93,12,0	0/1:18,0:17:22.50:60,0,23	0/1:33,0:33:19.66:58,0,20	./.	1/1:22,0:21:0.47:1,0,0	0/0:27,0:24:2.04:0,2,6	./.
chr10	55561992	.	CT	C	9201.86	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=18.355;DP=611;FS=18.469;HRun=2;HaplotypeScore=87.4031;InbreedingCoeff=0.9917;MQ=79.41;MQ0=0;MQRankSum=-1.295;QD=35.53;ReadPosRankSum=0.283;VQSLOD=3.0064;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,160,2362	0/0:12,0:12:36.10:0,36,518	0/0:16,0:16:46.97:0,47,597	0/0:12,0:12:30.10:0,30,420	0/0:23,0:23:69.23:0,69,1033	1/1:0,11:11:33.11:428,33,0	1/1:0,19:19:45.15:582,45,0	0/0:23,0:23:57.03:0,57,767	1/1:0,22:22:63.20:809,63,0	1/1:0,31:31:87.28:1129,87,0	1/1:0,10:10:27.09:350,27,0	0/0:24,0:24:72.23:0,72,1058	0/0:34,0:34:99:0,99,1445	0/0:28,0:28:84.28:0,84,1241	1/1:0,23:23:66.21:852,66,0	0/0:23,0:23:69.23:0,69,1034	0/0:33,0:33:99:0,99,1480	0/0:16,0:16:48.14:0,48,696	1/1:0,26:26:78.22:991,78,0	1/1:1,16:17:51.16:653,51,0	1/1:0,28:28:72.23:933,72,0	0/0:20,0:20:60.20:0,60,899	0/0:12,0:12:36.11:0,36,518	0/0:22,0:22:63.21:0,63,944	1/1:1,17:18:51.17:661,51,0	1/1:1,30:31:48.32:1114,48,0	1/1:1,18:19:45.15:584,45,0	1/1:0,4:4:9.03:115,9,0
chr10	55566692	.	G	GCAGA	24085.51	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-9.316;DP=860;FS=0.000;HRun=0;HaplotypeScore=137.3507;InbreedingCoeff=0.9998;MQ=79.89;MQ0=0;MQRankSum=-5.521;QD=63.05;ReadPosRankSum=1.803;VQSLOD=6.8566;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,154,2898	0/0:14,0:14:42.14:0,42,814	0/0:21,0:21:57.18:0,57,1048	0/0:25,0:25:59.64:0,60,996	0/0:29,0:29:84.26:0,84,1541	1/1:4,14:19:30.10:822,30,0	1/1:7,30:38:81.28:2205,81,0	0/0:37,0:37:99:0,102,1905	1/1:5,23:30:72.25:1958,72,0	1/1:8,41:49:99:3836,144,0	1/1:6,13:19:51.18:1345,51,0	0/0:45,0:45:99:0,129,2468	0/0:30,0:30:90.30:0,90,1711	0/0:40,0:40:99:0,120,2285	1/1:1,29:30:78.27:2103,78,0	0/0:38,1:39:35.17:0,35,1991	0/0:39,0:39:99:0,108,2034	0/0:32,0:32:93.32:0,93,1788	1/1:7,11:23:54.16:1307,54,0	1/1:7,26:35:71.88:1909,72,0	1/1:7,34:45:89.75:2430,90,0	0/0:26,0:26:78.25:0,78,1471	0/0:16,0:16:45.15:0,45,832	0/0:34,0:34:99:0,99,1875	1/1:3,23:28:69.24:1867,69,0	1/1:6,20:28:84.27:2127,84,0	1/1:3,19:26:54.19:1438,54,0	1/1:2,10:12:27.09:738,27,0
chr10	55567880	.	GT	G	4614.81	PASS	AB=0.840;AC=28;AF=0.500;AN=56;BaseQRankSum=8.178;DP=621;FS=0.348;HRun=12;HaplotypeScore=66.2657;InbreedingCoeff=0.8440;MQ=66.09;MQ0=10;MQRankSum=0.018;QD=14.70;ReadPosRankSum=4.811;VQSLOD=5.4341;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,1:43:88.48:0,88,1073	1/1:1,4:5:11.95:93,12,0	0/0:34,0:13:14.07:0,14,103	0/1:24,0:11:5.71:6,0,50	0/0:32,0:32:75.42:0,75,726	1/1:5,26:32:76.71:586,77,0	1/1:1,19:20:35.71:278,36,0	0/0:28,1:29:60.09:0,60,594	1/1:2,15:18:40.89:307,41,0	1/1:6,26:31:46.35:545,46,0	1/1:4,12:16:31.88:238,32,0	0/0:4,0:12:20.52:0,21,151	0/0:26,0:26:39.95:0,40,580	0/0:23,0:23:51.07:0,51,499	1/1:4,18:22:47.70:371,48,0	0/0:27,0:27:49.08:0,49,677	0/0:19,1:19:27.86:0,28,464	0/0:26,1:28:39.72:0,40,570	0/1:9,8:14:33.49:136,0,33	1/1:1,21:22:50.76:394,51,0	1/1:5,12:19:33.94:244,34,0	0/0:2,0:9:17.74:0,18,96	0/0:6,0:15:24.54:0,25,119	0/0:5,0:7:13.75:0,14,80	1/1:1,23:24:53.79:418,54,0	1/1:3,18:21:26.33:384,26,0	1/1:5,21:26:52.19:390,52,0	1/1:3,12:15:5.41:224,5,0
chr10	55569317	.	CG	C	9470.40	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=16.289;DP=660;FS=29.767;HRun=3;HaplotypeScore=96.5021;InbreedingCoeff=0.9998;MQ=86.08;MQ0=0;MQRankSum=-8.778;QD=33.23;ReadPosRankSum=1.692;VQSLOD=2.7651;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:96.27:0,96,1340	0/0:13,0:13:30.10:0,30,432	0/0:22,0:22:63.05:0,63,828	0/0:28,0:28:72.66:0,73,994	0/0:28,0:28:84.28:0,84,1204	1/1:1,20:21:60.19:741,60,0	1/1:4,18:22:57.13:675,57,0	0/0:32,0:32:93.27:0,93,1314	1/1:3,17:20:60.10:695,60,0	1/1:3,22:25:66.21:814,66,0	1/1:1,14:15:36.11:443,36,0	0/0:37,0:37:99:0,108,1458	0/0:32,0:32:93.28:0,93,1295	0/0:22,0:22:66.20:0,66,928	1/1:3,23:26:75.08:873,75,0	0/0:19,0:19:54.18:0,54,777	0/0:28,0:28:81.27:0,81,1165	0/0:13,0:13:36.12:0,36,518	1/1:3,23:26:72.20:865,72,0	1/1:2,17:19:51.16:627,51,0	1/1:3,31:34:84.25:1026,84,0	0/0:29,0:29:87.29:0,87,1252	0/0:17,0:17:48.16:0,48,690	0/0:22,0:22:66.22:0,66,948	1/1:0,26:26:72.01:865,72,0	1/1:0,20:20:60.19:738,60,0	1/1:3,18:21:60.19:736,60,0	1/1:0,10:10:30.09:371,30,0
chr10	55569354	.	C	CTT	13054.59	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=2.643;DP=677;FS=12.260;HRun=4;HaplotypeScore=97.8335;InbreedingCoeff=0.9992;MQ=76.59;MQ0=0;MQRankSum=-8.736;QD=45.17;ReadPosRankSum=-1.667;VQSLOD=3.0709;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:96.29:0,96,1263	0/0:7,0:7:21.06:0,21,265	0/0:25,0:25:69.15:0,69,848	0/0:17,0:17:45.13:0,45,600	0/0:40,0:40:99:0,114,1515	1/1:3,16:19:57.14:958,57,0	1/1:3,21:24:60.21:1080,60,0	0/0:34,0:34:99:0,99,1305	1/1:4,19:22:57.20:1021,57,0	1/1:4,16:21:60.17:992,60,0	1/1:3,18:21:54.14:933,54,0	0/0:35,0:35:99:0,102,1295	0/0:31,0:31:90.28:0,90,1180	0/0:26,0:26:78.26:0,78,1040	1/1:2,25:28:75.24:1315,75,0	0/0:25,0:25:72.22:0,72,944	0/0:26,0:26:72.21:0,72,938	0/0:18,0:18:51.13:0,51,659	1/1:8,18:26:66.20:1100,66,0	1/1:1,23:24:66.23:1185,66,0	1/1:7,13:20:42.13:705,42,0	0/0:28,0:28:72.21:0,72,943	0/0:18,0:18:48.16:0,48,640	0/0:25,0:25:75.25:0,75,1000	1/1:4,20:24:60.19:1051,60,0	1/1:3,19:22:63.21:1098,63,0	1/1:4,21:26:66.23:1187,66,0	1/1:2,8:10:24.08:430,24,0
chr10	55571509	.	GAC	G	2709.58	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=3.336;DP=372;FS=5.856;HRun=0;HaplotypeScore=51.2315;InbreedingCoeff=0.8888;MQ=71.03;MQ0=0;MQRankSum=-1.253;QD=16.03;ReadPosRankSum=0.759;VQSLOD=2.6966;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:44.05:0,44,509	0/0:4,0:4:6.48:0,6,62	0/0:11,1:12:13.99:0,14,262	0/0:4,0:3:2.98:0,3,22	0/0:5,0:5:9.47:0,9,99	1/1:2,8:12:21.02:265,21,0	1/1:5,22:28:23.70:295,24,0	0/0:26,0:26:58.19:0,58,430	1/1:2,4:6:9.02:115,9,0	1/1:0,8:12:35.97:401,36,0	1/1:0,3:3:6.02:88,6,0	0/0:18,0:18:20.99:0,21,210	0/0:16,0:16:40.59:0,41,417	0/0:22,0:22:45:0,45,546	1/1:1,12:13:18.05:248,18,0	0/0:9,0:9:17.96:0,18,196	0/0:17,0:17:8.98:0,9,72	0/0:11,0:11:20.86:0,21,212	1/1:8,4:12:30.04:347,30,0	1/1:1,7:8:21:236,21,0	1/1:8,25:36:33.08:417,33,0	0/0:14,0:14:30.96:0,31,381	0/0:4,0:4:9.03:0,9,156	0/0:15,0:15:32.87:0,33,380	1/1:11,2:13:11.95:112,12,0	1/1:1,8:10:23.65:237,24,0	1/1:3,8:12:9.01:98,9,0	1/1:4,0:4:8.97:72,9,0
chr10	55571510	.	ACAC	A	1576.58	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=5.605;DP=363;FS=4.036;HRun=0;HaplotypeScore=58.3382;InbreedingCoeff=0.8665;MQ=67.60;MQ0=0;MQRankSum=-1.690;QD=9.50;ReadPosRankSum=2.026;VQSLOD=2.6244;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:24:44.52:0,45,625	0/0:4,0:4:8.97:0,9,94	0/0:11,0:11:20.53:0,21,331	0/0:2,0:1:2.98:0,3,22	0/0:6,0:6:9.43:0,9,125	1/1:11,1:12:19.70:132,20,0	1/1:23,5:28:22.35:184,22,0	0/0:26,0:26:71.26:0,71,670	1/1:5,1:6:8.72:84,9,0	1/1:12,0:12:27.26:195,27,0	1/1:3,0:3:5.49:24,5,0	0/0:17,0:17:21:0,21,253	0/0:16,0:16:42.04:0,42,575	0/0:23,0:23:45.11:0,45,719	1/1:12,1:13:16.73:113,17,0	0/0:8,0:8:17.96:0,18,237	0/0:17,0:17:9.43:0,9,74	0/0:11,0:11:20.87:0,21,258	1/1:12,0:13:28.95:204,29,0	1/1:7,1:8:20.35:160,20,0	1/1:28,5:34:31.41:280,31,0	0/0:11,0:13:33.37:0,33,495	0/0:4,0:4:9.03:0,9,196	0/0:13,0:15:33.50:0,34,470	1/1:2,10:12:1.22:93,1,0	1/1:9,0:9:23.18:161,23,0	1/1:11,1:12:8.75:90,9,0	1/1:3,1:4:8.97:72,9,0
chr10	55571511	.	CA	C	1559.88	PASS	AB=0.800;AC=27;AF=0.482;AN=56;BaseQRankSum=7.464;DP=362;FS=27.338;HRun=1;HaplotypeScore=51.8438;InbreedingCoeff=0.7967;MQ=67.44;MQ0=0;MQRankSum=-0.254;QD=8.39;ReadPosRankSum=2.858;VQSLOD=-0.7122;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:23:38.71:0,39,388	0/0:4,0:4:5.34:0,5,62	0/0:11,0:11:13.21:0,13,213	0/0:2,0:1:2.98:0,3,22	0/0:6,0:6:9.14:0,9,60	1/1:11,2:13:23.80:168,24,0	1/1:34,0:34:10.22:163,10,0	0/0:25,0:25:16.43:0,16,215	1/1:6,0:6:8.92:62,9,0	1/1:8,4:12:31.29:227,31,0	1/1:3,0:3:5.95:42,6,0	0/0:16,0:16:20.96:0,21,183	0/1:12,4:16:21.56:22,0,229	0/0:22,0:22:45.34:0,45,417	1/1:13,0:13:17.85:126,18,0	0/0:8,0:8:17.89:0,18,150	0/0:15,0:15:8.46:0,8,71	0/0:11,0:11:20.83:0,21,180	1/1:12,0:12:29.85:230,30,0	1/1:8,0:8:20.45:139,20,0	1/1:33,2:35:34.01:236,34,0	0/0:14,0:14:19.29:0,19,251	0/0:4,0:4:9.03:0,9,118	0/0:15,0:15:21.04:0,21,280	1/1:12,0:12:7.17:59,7,0	1/1:8,1:9:22.43:160,22,0	1/1:10,0:10:8.96:69,9,0	1/1:3,0:3:8.97:72,9,0
chr10	55574627	.	A	AC	11102.28	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-14.993;DP=611;FS=0.305;HRun=3;HaplotypeScore=57.7554;InbreedingCoeff=0.9863;MQ=80.25;MQ0=0;MQRankSum=-2.127;QD=36.05;ReadPosRankSum=-1.808;VQSLOD=4.5738;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,102,1223	1/1:0,6:6:11.93:168,12,0	0/0:14,0:14:32.99:0,33,360	0/0:15,0:15:9.36:0,9,265	0/0:14,0:14:39.12:0,39,468	1/1:1,17:18:45.15:630,45,0	1/1:0,28:28:72.16:983,72,0	1/1:3,22:25:66.19:888,66,0	1/1:0,23:23:57.19:798,57,0	1/1:1,15:16:48.16:667,48,0	1/1:1,7:9:21.07:289,21,0	0/0:38,0:38:99:0,111,1330	0/0:30,0:30:84.26:0,84,1007	0/0:35,0:35:99:0,99,1176	1/1:1,29:30:81.27:1134,81,0	0/0:13,0:13:39.12:0,39,468	0/0:28,0:28:81.25:0,81,971	0/0:34,0:34:93.27:0,93,1105	1/1:0,25:25:72.11:910,72,0	1/1:0,10:10:30.06:397,30,0	1/1:2,52:54:99:1889,135,0	0/0:7,0:7:21.06:0,21,252	0/0:9,0:9:27.08:0,27,324	0/0:29,0:29:81.22:0,81,947	1/1:1,15:16:39.13:546,39,0	1/1:2,24:26:72.21:964,72,0	1/1:0,15:15:39.13:545,39,0	1/1:0,7:7:21.07:294,21,0
chr10	55577226	.	ACT	A	915.44	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=2.808;DP=624;FS=1.505;HRun=0;HaplotypeScore=165.7624;InbreedingCoeff=0.6393;MQ=86.58;MQ0=1;MQRankSum=0.804;QD=26.92;ReadPosRankSum=-0.626;VQSLOD=4.6040;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,148,2970	0/0:9,0:9:27.03:0,27,322	0/0:30,0:30:84.28:0,84,1603	0/0:24,0:23:51.16:0,51,1020	0/0:18,0:18:54.14:0,54,1012	0/0:16,0:16:44.95:0,45,485	0/0:28,0:28:71.89:0,72,765	0/0:26,0:26:75.22:0,75,939	0/0:27,0:27:45.02:0,45,779	0/0:28,0:28:84.07:0,84,958	0/0:13,0:13:18.89:0,19,350	0/0:33,0:33:99:0,99,1990	0/0:25,0:25:75.26:0,75,1523	0/0:33,0:33:99:0,99,1921	0/0:22,0:22:26.49:0,26,663	0/0:26,0:26:78.23:0,78,1457	0/0:10,0:10:30.10:0,30,609	0/0:24,0:24:72.22:0,72,1423	0/0:20,0:20:60.07:0,60,738	0/0:9,0:9:27.01:0,27,293	0/1:11,0:11:44.97:45,0,115	0/0:22,0:22:66.22:0,66,1294	0/0:20,0:20:60.21:0,60,1218	0/0:34,0:34:99:0,99,1937	0/0:19,0:19:47.77:0,48,482	1/1:0,23:23:69.21:977,69,0	0/0:19,0:19:54.01:0,54,606	0/0:6,0:6:18.06:0,18,221
chr10	55577229	.	T	TAAGAACAG	27083.76	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-8.426;DP=626;FS=3.049;HRun=0;HaplotypeScore=155.1035;InbreedingCoeff=0.9956;MQ=84.70;MQ0=1;MQRankSum=-18.117;QD=106.21;ReadPosRankSum=-1.834;VQSLOD=5.0831;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,150,4428	1/1:2,5:8:18.06:729,18,0	0/0:27,0:27:81.24:0,81,2247	0/0:23,0:22:55.45:0,55,1480	0/0:19,0:19:57.17:0,57,1508	1/1:3,13:19:44.66:1963,45,0	1/1:5,17:23:65.89:2802,66,0	1/1:8,14:29:75.24:2783,75,0	1/1:1,18:21:57.20:2536,57,0	1/1:5,18:25:75.22:3221,75,0	1/1:4,9:14:39.13:1518,39,0	0/0:33,0:33:99:0,99,2912	0/0:25,0:25:75.26:0,75,2271	0/0:30,0:30:90.31:0,90,2727	1/1:6,19:27:72.25:2874,72,0	0/0:27,0:27:78.25:0,78,2171	0/0:10,0:10:30.10:0,30,909	0/0:23,0:23:69.24:0,69,2089	1/1:7,10:19:51.14:2019,51,0	1/1:6,7:14:24.08:1073,24,0	1/1:4,7:16:27.09:795,27,0	0/0:23,0:23:69.24:0,69,2012	0/0:21,0:21:63.21:0,63,1824	0/0:35,0:35:99:0,105,2977	1/1:0,11:14:33.09:1460,33,0	0/0:24,0:24:14.15:0,14,567	1/1:4,11:17:48.16:2192,48,0	1/1:3,6:9:27.09:1119,27,0
chr10	55579171	.	A	ACAG	17859.49	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-6.005;DP=780;FS=0.577;HRun=0;HaplotypeScore=175.9636;InbreedingCoeff=0.9995;MQ=84.59;MQ0=0;MQRankSum=-13.230;QD=49.75;ReadPosRankSum=-0.885;VQSLOD=5.5074;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:62,0:62:99:0,181,2907	1/1:0,10:11:27.09:610,27,0	0/0:24,0:24:57.19:0,57,925	0/0:38,0:37:90.67:0,91,1451	0/0:28,0:28:75.23:0,75,1185	1/1:6,14:20:36.12:813,36,0	1/1:4,22:26:57.20:1288,57,0	1/1:3,24:29:78.25:1599,78,0	1/1:7,17:25:60.19:1283,60,0	1/1:4,25:29:81.28:1754,81,0	1/1:4,12:16:36.09:725,36,0	0/0:36,0:36:96.29:0,96,1502	0/0:25,0:25:72.15:0,72,1085	0/0:34,0:34:99:0,99,1602	1/1:9,24:32:72.25:1607,72,0	0/0:30,0:30:81.26:0,81,1320	0/0:33,0:33:96.22:0,96,1527	0/0:31,0:31:81.26:0,81,1286	1/1:13,9:21:45.08:802,45,0	1/1:5,26:32:66.17:1409,66,0	1/1:8,10:18:36.10:704,36,0	0/0:23,0:23:69.21:0,69,1083	0/0:21,0:21:60.20:0,60,990	0/0:36,0:36:99:0,105,1729	1/1:5,13:18:45.15:998,45,0	1/1:8,29:37:99:2045,99,0	1/1:8,21:29:78.18:1680,78,0	1/1:1,12:13:24.08:543,24,0
chr10	55579208	.	A	AGGTCCCCACATGG	33955.71	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-1.437;DP=691;FS=7.900;HRun=0;HaplotypeScore=220.7489;InbreedingCoeff=0.9972;MQ=80.90;MQ0=0;MQRankSum=-17.946;QD=132.64;ReadPosRankSum=3.862;VQSLOD=3.8807;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:61,0:61:99:0,175,6345	0/0:10,0:10:27.09:0,27,1112	0/0:24,0:24:71.03:0,71,2035	0/0:21,0:21:60.08:0,60,1851	0/0:25,0:25:75.24:0,75,2846	1/1:1,10:19:30.10:2030,30,0	1/1:13,9:22:66.13:3083,66,0	0/0:32,0:32:96.30:0,96,3292	1/1:1,17:26:51.18:3450,51,0	1/1:6,10:16:48.15:2582,48,0	1/1:1,6:9:18.06:1214,18,0	0/0:26,0:26:75.26:0,75,3138	0/0:22,0:22:66.23:0,66,2616	0/0:39,0:39:99:0,117,4311	1/1:0,21:29:60.21:4057,60,0	0/0:22,0:22:66.21:0,66,2504	0/0:41,0:41:99:0,123,4014	0/0:35,0:35:99:0,102,3672	1/1:2,8:17:51.13:2437,51,0	1/1:5,11:16:42.12:2400,42,0	1/1:0,8:21:24.08:1623,24,0	0/0:22,0:22:65.89:0,66,2519	0/0:17,0:17:51.16:0,51,1969	0/0:38,0:38:99:0,114,4368	1/1:0,10:23:33.11:2233,33,0	1/1:12,13:25:75.24:4363,75,0	1/1:0,17:25:51.18:3451,51,0	1/1:2,4:6:17.99:1034,18,0
chr10	55579936	.	TCCCAGCCTAC	T	3861.48	PASS	AB=0.691;AC=29;AF=0.518;AN=56;BaseQRankSum=8.134;DP=586;FS=5.102;HRun=0;HaplotypeScore=167.9681;InbreedingCoeff=0.8229;MQ=80.37;MQ0=0;MQRankSum=-5.561;QD=13.89;ReadPosRankSum=0.921;VQSLOD=2.3278;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:90.29:0,90,3501	1/1:0,3:3:3.48:92,3,0	0/0:28,0:29:10.67:0,11,622	0/0:27,0:27:18.25:0,18,874	0/0:8,0:8:12.04:0,12,423	1/1:6,13:19:9.03:274,9,0	1/1:14,18:32:7.43:146,7,0	1/1:21,0:21:15.02:199,15,0	1/1:6,16:22:15.05:457,15,0	1/1:5,7:12:9.03:198,9,0	1/1:3,1:4:3.01:91,3,0	0/0:26,0:26:54.48:0,54,1605	0/0:24,0:24:54.05:0,54,1702	0/0:28,0:28:72.22:0,72,3008	1/1:5,15:20:27.09:821,27,0	0/0:31,0:31:63.22:0,63,2811	0/0:30,0:30:78.26:0,78,3077	0/0:29,0:29:69.17:0,69,2503	1/1:11,9:20:26.67:394,27,0	1/1:5,1:6:6.01:119,6,0	0/1:31,25:56:0.07:0,0,0	0/0:5,0:5:12.04:0,12,355	0/0:2,0:2:6.02:0,6,242	0/0:31,0:31:75.26:0,75,3120	1/1:6,11:17:2.94:18,3,0	1/1:9,6:15:18.06:380,18,0	1/1:5,16:21:12.10:365,12,0	1/1:10,0:9:15.05:306,15,0
chr10	55580250	.	TAAAAAAA	T	4088.41	PASS	AC=26;AF=0.500;AN=52;BaseQRankSum=6.524;DP=307;FS=26.946;HRun=17;HaplotypeScore=69.1005;InbreedingCoeff=0.8694;MQ=47.27;MQ0=32;MQRankSum=-7.996;QD=27.62;ReadPosRankSum=4.144;VQSLOD=-0.3461;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:16:39.09:0,39,1092	./.	0/0:15,0:6:9.03:0,9,175	0/0:8,0:2:6:0,6,52	0/0:16,0:15:30.02:0,30,825	1/1:6,6:10:8.97:179,9,0	1/1:1,4:5:8.99:179,9,0	1/1:10,8:11:17.93:358,18,0	1/1:1,5:6:15.05:280,15,0	1/1:4,9:12:26.94:502,27,0	1/1:4,7:10:17.90:358,18,0	0/0:6,0:4:12:0,12,340	0/0:6,0:6:18.06:0,18,609	0/0:5,0:6:15.05:0,15,412	1/1:0,5:5:12.04:239,12,0	0/0:15,0:14:39.13:0,39,1399	0/0:25,0:26:57.15:0,57,1795	0/0:24,0:21:54.11:0,54,1572	1/1:7,4:9:8.69:134,9,0	1/1:3,6:10:6.85:361,7,0	./.	0/0:1,0:1:3.01:0,3,110	0/0:2,0:4:6.02:0,6,187	0/0:4,0:5:12.04:0,12,406	1/1:5,9:13:21.04:417,21,0	1/1:6,7:11:17.46:308,17,0	1/1:6,7:11:17.99:358,18,0	1/1:7,8:12:21.02:418,21,0
chr10	55580471	.	TGGGAGATACTGTCGTCATCTGTCGACAG	T	8094.09	PASS	AB=1.000;AC=31;AF=0.554;AN=56;BaseQRankSum=10.084;DP=617;FS=21.860;HRun=0;HaplotypeScore=418.3561;InbreedingCoeff=0.7401;MQ=86.07;MQ0=1;MQRankSum=-6.147;QD=28.50;ReadPosRankSum=-1.388;VQSLOD=1.6916;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:93.31:0,93,9494	1/1:3,5:8:6.02:432,6,0	0/0:22,0:22:9.03:0,9,380	0/1:29,0:28:24.22:24,0,368	0/0:21,0:21:39.12:0,39,3432	1/1:14,6:20:9.03:648,9,0	1/1:19,0:19:3.01:73,3,0	1/1:23,0:23:6:98,6,0	1/1:11,6:17:15.05:1080,15,0	1/1:7,8:15:21.06:866,21,0	1/1:4,5:9:12.04:664,12,0	0/0:37,0:37:93.32:0,93,10293	0/0:24,0:24:51.18:0,51,4959	0/0:28,0:28:54.19:0,54,5530	1/1:15,4:19:8.96:648,9,0	0/0:24,0:24:48.16:0,48,4889	0/0:36,0:36:90.30:0,90,8389	0/0:26,0:26:60.19:0,60,6086	1/1:25,2:27:4.25:287,4,0	1/1:15,3:18:6.02:430,6,0	1/1:25,0:24:3.01:71,3,0	0/0:16,0:16:33.10:0,33,2858	0/0:10,0:10:18.06:0,18,1824	0/0:44,0:44:99:0,108,10818	1/1:7,4:11:6.02:431,6,0	1/1:9,4:13:9.03:648,9,0	1/1:12,10:22:21.07:1512,21,0	1/1:4,5:9:3.01:183,3,0
chr10	55581637	.	A	AAAAC	547.87	PASS	AB=0.989;AC=8;AF=0.143;AN=56;BaseQRankSum=-0.411;DP=606;FS=5.434;HRun=0;HaplotypeScore=116.4903;InbreedingCoeff=0.4589;MQ=68.76;MQ0=4;MQRankSum=-0.717;QD=4.53;ReadPosRankSum=-2.986;VQSLOD=1.4451;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:91.61:0,92,651	1/1:2,10:13:20.81:309,21,0	0/0:32,0:13:20.08:0,20,160	0/1:20,0:9:7.97:8,0,41	0/0:23,0:23:39.97:0,40,348	0/0:17,0:17:22.85:0,23,328	0/0:19,0:19:33.56:0,34,449	1/1:9,10:21:20.62:339,21,0	0/0:16,0:16:20.29:0,20,219	0/1:21,0:21:21.23:21,0,312	0/0:11,0:10:16.73:0,17,155	0/0:25,0:25:53.70:0,54,413	0/0:21,0:21:46.22:0,46,399	0/0:28,0:28:38.57:0,39,419	0/0:15,0:15:20.98:0,21,248	0/0:17,0:17:21.48:0,21,170	0/0:26,0:26:66.31:0,66,578	0/0:29,0:29:35.71:0,36,317	0/1:26,0:26:4.27:4,0,411	0/0:24,0:24:20.05:0,20,282	0/0:12,0:12:13.27:0,13,230	0/0:17,0:17:16.26:0,16,193	0/0:12,0:12:5.66:0,6,138	0/0:31,0:31:66.14:0,66,453	0/1:19,0:19:0.86:1,0,274	0/0:29,0:29:34.52:0,35,503	0/0:14,0:14:33.22:0,33,284	0/0:24,0:24:52.71:0,53,517
chr10	55583790	.	GAC	G	8401.30	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=15.716;DP=770;FS=5.568;HRun=0;HaplotypeScore=91.5311;InbreedingCoeff=0.9628;MQ=83.31;MQ0=2;MQRankSum=-5.288;QD=32.19;ReadPosRankSum=4.812;VQSLOD=6.7068;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,46:49:99:1566,114,0	0/0:11,0:11:27.09:0,27,461	0/0:24,0:23:57.14:0,57,936	0/0:33,0:32:76.05:0,76,1257	1/1:3,19:22:48.16:659,48,0	0/0:26,0:26:66.23:0,66,1170	0/0:30,0:30:78.25:0,78,1348	0/0:34,0:34:90.31:0,90,1583	0/0:33,0:33:87.30:0,87,1536	0/0:20,0:20:60.19:0,60,1037	0/0:20,0:20:60.20:0,60,1036	1/1:1,20:21:0.96:647,1,0	0/0:28,0:28:78.27:0,78,1383	0/0:30,0:30:84.29:0,84,1477	0/0:34,0:34:96.33:0,96,1696	1/1:3,27:30:28.32:789,28,0	1/1:2,31:33:84.28:1154,84,0	1/1:0,24:23:63.21:865,63,0	0/0:23,0:23:57.17:0,57,975	0/0:26,0:26:72.25:0,72,1267	0/0:34,0:34:99:0,99,1708	1/1:2,26:28:57.19:783,57,0	1/1:1,19:20:54.18:742,54,0	1/1:0,33:33:87.29:1195,87,0	0/0:25,0:25:72.22:0,72,1208	0/0:28,0:28:84.26:0,84,1393	0/0:25,0:25:72.25:0,72,1252	0/0:25,0:25:72.21:0,72,1195
chr10	55584004	.	A	ATCTGTCAC	23517.30	PASS	AB=1.000;AC=31;AF=0.554;AN=56;BaseQRankSum=-3.741;DP=676;FS=17.870;HRun=0;HaplotypeScore=167.1748;InbreedingCoeff=0.9200;MQ=82.95;MQ0=0;MQRankSum=-18.814;QD=88.08;ReadPosRankSum=-1.376;VQSLOD=3.8538;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:71,0:70:99:0,208,5633	1/1:4,9:14:33.11:1469,33,0	0/0:22,0:22:63.18:0,63,1638	0/0:28,0:28:75.24:0,75,1902	0/0:28,0:28:78.27:0,78,2222	1/1:13,0:13:33.11:1290,33,0	1/1:19,0:19:33.11:1294,33,0	1/1:12,9:26:78.25:2953,78,0	1/1:28,0:28:81.28:3181,81,0	1/1:12,0:12:36.12:1427,36,0	1/1:10,0:10:12.04:479,12,0	0/0:30,0:30:87.28:0,87,2421	0/0:25,0:25:75.25:0,75,2102	0/0:27,0:27:81.28:0,81,2336	1/1:18,0:18:54.19:2135,54,0	0/1:21,0:21:60.30:60,0,1500	0/0:49,0:49:99:0,144,4023	0/0:36,0:36:99:0,105,2956	1/1:18,0:18:34.51:1573,35,0	1/1:13,0:13:30.10:1173,30,0	1/1:14,0:14:21.03:832,21,0	0/0:31,0:31:93.30:0,93,2615	0/0:18,0:18:54.17:0,54,1434	0/0:44,0:43:99:0,123,3474	1/1:10,0:10:21.07:813,21,0	1/1:18,0:18:54.19:1994,54,0	1/1:24,0:23:57.20:2248,57,0	1/1:9,0:9:15.05:595,15,0
chr10	55584005	.	T	TCTGTCACC	26588.25	PASS	AB=0.955;AC=31;AF=0.554;AN=56;BaseQRankSum=-9.127;DP=708;FS=17.006;HRun=0;HaplotypeScore=168.4271;InbreedingCoeff=0.9200;MQ=82.50;MQ0=0;MQRankSum=-17.385;QD=88.33;ReadPosRankSum=-2.566;VQSLOD=3.6054;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:71,0:70:99:0,211,5905	1/1:11,0:11:27.09:1060,27,0	0/0:22,0:22:63.18:0,63,1685	0/0:29,0:29:75.24:0,75,1987	0/0:28,0:28:84.25:0,84,2340	1/1:4,10:17:36.12:1568,36,0	1/1:5,8:20:36.12:1542,36,0	1/1:18,0:18:49.96:1749,50,0	1/1:2,23:27:78.22:3469,78,0	1/1:6,12:25:66.23:2328,66,0	1/1:1,4:9:12.04:553,12,0	0/0:29,0:29:87.30:0,87,2550	0/0:25,0:25:75.25:0,75,2174	0/0:27,0:27:81.28:0,81,2423	1/1:3,15:19:51.13:2229,51,0	0/1:20,1:21:75.23:75,0,1574	0/0:48,0:48:99:0,144,4200	0/0:35,0:35:99:0,105,3052	1/1:8,7:17:28.48:1534,28,0	1/1:5,8:22:51.06:1697,51,0	1/1:2,10:13:21.03:963,21,0	0/0:31,0:31:93.32:0,93,2740	0/0:18,0:18:54.19:0,54,1555	0/0:44,0:43:99:0,126,3655	1/1:4,5:18:21.07:907,21,0	1/1:8,16:29:84.29:3263,84,0	1/1:6,19:27:66.23:2989,66,0	1/1:1,4:7:15.05:662,15,0
chr10	55586265	.	TG	T	12926.22	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=14.744;DP=730;FS=2.667;HRun=1;HaplotypeScore=69.4719;InbreedingCoeff=1.0000;MQ=87.58;MQ0=0;MQRankSum=-4.327;QD=39.65;ReadPosRankSum=1.984;VQSLOD=5.6407;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,117,1867	0/0:13,0:13:39.13:0,39,619	0/0:30,0:30:90.27:0,90,1384	0/0:25,0:25:72.24:0,72,1134	0/0:23,0:23:69.24:0,69,1102	1/1:0,16:16:39.13:545,39,0	1/1:0,36:36:99:1427,102,0	0/0:32,0:32:96.32:0,96,1513	1/1:0,23:23:66.22:922,66,0	1/1:0,31:31:93.31:1301,93,0	1/1:0,21:21:60.20:839,60,0	0/0:22,0:22:66.23:0,66,1053	0/0:30,0:30:90.31:0,90,1439	0/0:32,0:32:96.30:0,96,1485	1/1:0,27:27:75.25:1049,75,0	0/0:32,0:32:96.31:0,96,1512	0/0:27,0:27:81.28:0,81,1295	0/0:22,0:22:66.23:0,66,1055	1/1:0,23:23:69.21:947,69,0	1/1:0,18:18:54.18:755,54,0	1/1:0,29:29:81.27:1133,81,0	0/0:24,0:24:72.25:0,72,1151	0/0:27,0:27:81.25:0,81,1248	0/0:25,0:25:72.23:0,72,1122	1/1:0,23:23:66.22:923,66,0	1/1:0,33:33:96.30:1323,96,0	1/1:0,30:30:87.29:1217,87,0	1/1:0,16:16:39.13:545,39,0
chr10	55588823	.	AC	A	11217.75	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=11.226;DP=695;FS=1.602;HRun=2;HaplotypeScore=70.2460;InbreedingCoeff=0.9935;MQ=83.97;MQ0=0;MQRankSum=1.436;QD=36.19;ReadPosRankSum=3.160;VQSLOD=5.5572;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,141,2083	0/0:4,0:4:12.04:0,12,180	0/0:27,0:27:78.19:0,78,1083	0/0:19,0:19:50.15:0,50,643	0/0:24,0:24:69.21:0,69,994	1/1:0,19:19:51.17:662,51,0	1/1:0,33:33:93.30:1207,93,0	0/0:34,0:34:99:0,99,1482	1/1:1,28:29:84.27:1090,84,0	1/1:3,17:20:51.16:661,51,0	1/1:0,18:18:48.16:623,48,0	0/0:30,0:30:84.28:0,84,1247	0/0:21,0:21:54.18:0,54,807	0/0:33,0:33:96.33:0,96,1437	1/1:0,33:33:81.26:1051,81,0	0/0:34,0:34:99:0,102,1470	0/0:33,0:33:90.28:0,90,1301	0/0:30,0:30:87.29:0,87,1297	1/1:0,22:22:66.19:840,66,0	1/1:0,17:17:51.17:662,51,0	1/1:1,44:45:99:1632,126,0	0/0:11,0:11:30.10:0,30,437	0/0:15,0:15:45.15:0,45,664	0/0:22,0:22:63.20:0,63,924	1/1:0,12:12:30.10:390,30,0	1/1:0,29:29:87.27:1116,87,0	1/1:0,28:28:84.27:1088,84,0	1/1:0,5:5:15.05:195,15,0
chr10	55589054	.	T	TA	2794.58	PASS	AB=0.790;AC=29;AF=0.518;AN=56;BaseQRankSum=-4.390;DP=459;FS=4.351;HRun=13;HaplotypeScore=53.4108;InbreedingCoeff=0.5630;MQ=51.74;MQ0=37;MQRankSum=0.555;QD=9.28;ReadPosRankSum=-1.297;VQSLOD=2.2857;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,1:20:21.43:0,21,274	0/1:4,1:10:3.05:55,0,3	0/0:10,1:2:2.97:0,3,20	0/1:13,0:6:3.27:18,0,3	0/0:21,1:24:12.10:0,12,209	1/1:9,21:29:3.89:321,4,0	1/1:6,3:7:9.01:84,9,0	1/1:16,1:24:20.74:215,21,0	1/1:2,7:9:17.86:154,18,0	1/1:8,14:23:2.62:270,3,0	1/1:5,10:12:26.98:242,27,0	0/0:14,0:13:26.69:0,27,181	0/0:8,0:7:11.78:0,12,75	0/1:14,1:15:7.16:7,0,98	1/1:5,11:14:23.78:223,24,0	0/0:12,0:11:32.70:0,33,223	0/0:33,1:28:3.83:0,4,314	0/0:19,1:19:13.79:0,14,239	1/1:9,13:17:27.02:247,27,0	0/1:12,6:13:20.14:118,0,20	1/1:2,7:10:17.86:154,18,0	0/0:3,1:4:2.89:0,3,20	0/0:7,0:7:8.90:0,9,62	0/0:4,0:4:11.90:0,12,82	0/1:8,8:17:5.73:83,0,6	1/1:8,11:19:29.87:265,30,0	1/1:10,11:23:24.20:312,24,0	1/1:7,11:15:24.03:223,24,0
chr10	55592051	.	G	GCACTCACACACTCACA	6979.01	PASS	AB=1.000;AC=23;AF=0.426;AN=54;BaseQRankSum=-1.653;DP=571;FS=24.608;HRun=0;HaplotypeScore=227.3041;InbreedingCoeff=0.8225;MQ=56.25;MQ0=6;MQRankSum=-5.092;QD=30.74;ReadPosRankSum=-1.819;VQSLOD=2.2249;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:57.11:0,57,1774	0/0:5,0:5:15.01:0,15,540	0/0:33,0:13:32.79:0,33,542	0/0:39,0:18:39.06:0,39,457	0/0:14,0:14:38.87:0,39,1096	./.	1/1:26,0:25:36.03:466,36,0	0/0:33,0:33:93.14:0,93,2407	1/1:2,9:14:2.58:19,3,0	1/1:18,1:19:57.20:1816,57,0	1/1:20,0:20:15.02:201,15,0	0/0:13,0:13:24.07:0,24,823	0/0:20,0:20:51.10:0,51,1704	0/0:19,0:19:48.11:0,48,1505	1/1:20,0:19:9.36:174,9,0	0/0:19,0:19:45.14:0,45,1438	0/0:37,0:37:83.71:0,84,2396	0/0:29,0:29:78.60:0,79,2536	1/1:19,1:19:49.04:1384,49,0	1/1:12,0:12:3.01:51,3,0	1/1:46,0:46:38.89:443,39,0	0/0:7,0:7:18.04:0,18,491	0/0:8,0:8:12.04:0,12,383	0/0:26,0:26:66.12:0,66,1964	1/1:10,1:11:8.04:82,8,0	0/1:20,0:20:88.52:1217,0,89	1/1:13,0:13:13.29:666,13,0	1/1:1,3:6:6.02:459,6,0
chr10	55592063	.	GCACA	G	269.92	PASS	AB=0.998;AC=9;AF=0.161;AN=56;BaseQRankSum=4.083;DP=621;FS=3.935;HRun=0;HaplotypeScore=152.6741;InbreedingCoeff=0.0691;MQ=49.20;MQ0=14;MQRankSum=-2.210;QD=1.42;ReadPosRankSum=-2.712;VQSLOD=2.0640;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:56.17:0,56,1062	0/0:4,0:4:12.04:0,12,190	0/0:47,0:7:12.04:0,12,226	0/1:56,0:9:2.59:3,0,87	0/0:18,0:18:40.16:0,40,601	0/1:14,0:14:0.21:49,0,0	0/1:26,0:25:9.60:10,0,83	0/0:32,0:32:72.08:0,72,1303	0/0:12,0:12:3:0,3,26	0/1:26,0:26:99:116,0,109	0/0:19,0:19:5.96:0,6,44	0/0:13,0:13:17.97:0,18,394	0/0:18,0:18:54.18:0,54,1217	0/0:24,0:24:63.17:0,63,1277	0/0:21,0:20:1.67:0,2,10	0/0:19,0:19:39.12:0,39,910	0/0:38,0:38:72.22:0,72,1531	0/0:36,0:36:69.44:0,69,1324	0/1:22,0:21:80.72:97,0,81	1/1:16,0:16:5.91:60,6,0	0/0:14,21:35:2.88:0,3,45	0/0:8,0:8:13.89:0,14,299	0/0:12,0:12:19.12:0,19,318	0/0:23,0:23:48.60:0,49,1030	0/0:11,0:11:2.31:0,2,10	0/1:19,0:19:33.67:34,0,117	0/1:10,0:10:33.96:34,0,35	0/0:4,0:4:6:0,6,66
chr10	55592069	.	A	ACG	2244.87	PASS	AB=0.705;AC=22;AF=0.393;AN=56;BaseQRankSum=5.738;DP=654;FS=15.722;HRun=0;HaplotypeScore=140.2044;InbreedingCoeff=0.7265;MQ=47.02;MQ0=20;MQRankSum=-4.823;QD=11.06;ReadPosRankSum=-2.477;VQSLOD=1.9375;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:54.07:0,54,622	0/0:4,0:4:12.04:0,12,183	0/0:62,0:7:12.04:0,12,179	0/0:73,0:9:11.74:0,12,134	0/0:17,0:17:38.40:0,38,455	1/1:9,3:13:8.82:150,9,0	1/1:20,5:24:24.09:211,24,0	0/0:34,0:34:85.49:0,85,1207	1/1:10,2:12:2.64:54,3,0	1/1:18,7:25:57.38:568,57,0	1/1:4,16:20:6.02:102,6,0	0/0:13,0:13:18.05:0,18,226	0/0:19,0:19:57.18:0,57,848	0/0:26,0:26:72.14:0,72,968	0/1:5,13:18:2.78:48,0,3	0/0:18,0:18:39.09:0,39,452	0/0:40,0:40:74.12:0,74,785	0/0:36,0:36:71.63:0,72,812	0/1:20,5:24:6.80:406,0,7	1/1:3,12:15:9.03:140,9,0	0/0:30,1:32:2.13:0,2,8	0/0:7,0:7:11.88:0,12,117	0/0:13,0:12:15.04:0,15,168	0/0:24,0:24:51.01:0,51,583	1/1:6,4:10:2.81:55,3,0	1/1:6,15:22:4.63:476,5,0	1/1:6,6:11:12.39:142,12,0	1/1:4,1:5:10.04:89,10,0
chr10	55592075	.	T	TCACA	5642.45	PASS	AB=0.901;AC=42;AF=0.750;AN=56;BaseQRankSum=-1.119;DP=680;FS=8.641;HRun=0;HaplotypeScore=140.1360;InbreedingCoeff=0.4617;MQ=47.13;MQ0=23;MQRankSum=-1.547;QD=10.89;ReadPosRankSum=2.902;VQSLOD=3.9533;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,15:33:26.30:473,26,0	0/0:2,0:4:6.01:0,6,56	0/0:84,0:15:7.90:0,8,103	0/1:91,0:18:5.18:5,0,178	1/1:16,1:18:10.82:191,11,0	1/1:15,0:15:10.68:54,11,0	0/1:24,0:23:8.67:9,0,56	0/1:21,0:35:22.21:22,0,141	1/1:13,0:13:5.35:32,5,0	1/1:21,0:21:30.39:231,30,0	1/1:20,0:20:10.85:65,11,0	1/1:2,10:13:11.95:290,12,0	0/0:18,0:19:48.09:0,48,683	0/0:22,0:24:59.93:0,60,903	1/1:16,0:15:1.92:8,2,0	1/1:2,15:19:30.02:726,30,0	1/1:6,26:37:53.59:1056,54,0	1/1:9,24:34:42.14:1011,42,0	1/1:21,0:19:19.91:132,20,0	1/1:15,0:15:7.78:37,8,0	0/0:31,0:31:2.78:0,3,21	1/1:1,7:9:9.03:218,9,0	1/1:9,6:14:17.99:334,18,0	0/1:8,13:23:64.96:500,0,65	1/1:11,0:11:4.28:14,4,0	1/1:18,0:18:24.65:147,25,0	1/1:12,0:11:10.02:51,10,0	1/1:5,0:5:5.21:36,5,0
chr10	55593850	.	GA	G	1406.23	PASS	AB=0.755;AC=29;AF=0.518;AN=56;BaseQRankSum=1.468;DP=273;FS=15.536;HRun=14;HaplotypeScore=45.5618;InbreedingCoeff=0.5180;MQ=76.23;MQ0=0;MQRankSum=2.564;QD=8.68;ReadPosRankSum=1.970;VQSLOD=1.0064;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:16:35.54:0,36,298	1/1:0,4:4:8.92:62,9,0	0/1:24,1:10:23.81:24,0,57	0/0:18,0:15:5.35:0,5,128	0/0:10,0:13:21.46:0,21,149	1/1:0,8:10:27.65:168,28,0	0/1:1,8:9:1.05:138,0,1	1/1:4,9:16:27.80:176,28,0	1/1:2,3:7:12.94:70,13,0	1/1:6,8:14:1.84:157,2,0	0/1:1,7:8:1.62:92,0,2	0/0:6,0:6:17.95:0,18,151	0/0:3,0:3:9:0,9,80	0/1:6,0:6:2.35:2,0,110	1/1:10,4:17:28.82:166,29,0	0/0:12,1:14:11.03:0,11,266	0/0:14,1:15:29.87:0,30,251	0/0:6,0:6:17.75:0,18,146	1/1:1,3:5:10.89:65,11,0	1/1:2,4:7:0.32:68,0,0	1/1:0,6:6:11.89:82,12,0	0/0:4,0:5:14.84:0,15,122	0/0:6,1:7:0.49:0,0,146	0/0:8,0:8:0.82:0,1,136	1/1:0,4:6:16.84:104,17,0	1/1:1,10:12:4.57:144,5,0	0/1:4,1:6:15.41:15,0,45	1/1:0,4:4:8.92:61,9,0
chr10	55596181	.	TACAC	T	5272.68	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=7.340;DP=341;FS=3.442;HRun=0;HaplotypeScore=63.6209;InbreedingCoeff=0.9368;MQ=65.02;MQ0=2;MQRankSum=-7.229;QD=41.19;ReadPosRankSum=-0.357;VQSLOD=4.8359;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:72.17:0,72,1634	0/0:6,0:6:18.06:0,18,463	0/0:11,0:10:18.05:0,18,399	0/0:20,0:17:34.90:0,35,1067	0/0:13,0:13:36.11:0,36,911	1/1:0,6:6:18.06:341,18,0	1/1:2,2:4:3.01:57,3,0	0/0:31,0:31:87.25:0,87,2161	1/1:2,10:10:27.09:500,27,0	1/1:0,6:6:18.05:309,18,0	1/1:3,4:7:21.06:345,21,0	0/0:9,0:9:24.08:0,24,647	0/0:13,0:13:39.12:0,39,975	0/0:10,0:10:24.08:0,24,634	1/1:1,9:10:30.10:543,30,0	0/0:19,0:19:45.15:0,45,1214	0/0:20,0:20:36.10:0,36,908	0/0:11,0:11:30.05:0,30,648	1/1:0,16:16:46.33:678,46,0	1/1:0,14:14:33.11:585,33,0	1/1:2,8:10:10.39:173,10,0	0/0:3,0:3:9.03:0,9,243	0/0:5,0:5:12.04:0,12,321	0/0:13,0:13:33.11:0,33,853	1/1:2,8:9:21.07:377,21,0	1/1:2,11:13:33.11:609,33,0	1/1:2,13:15:36.06:642,36,0	1/1:0,5:5:6.02:114,6,0
chr10	55596207	.	TA	T	1563.38	PASS	AB=0.735;AC=32;AF=0.571;AN=56;BaseQRankSum=-0.085;DP=371;FS=1.443;HRun=15;HaplotypeScore=63.2039;InbreedingCoeff=0.2444;MQ=66.61;MQ0=4;MQRankSum=1.375;QD=5.69;ReadPosRankSum=2.211;VQSLOD=2.5803;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,17:23:39.23:242,39,0	0/0:3,0:3:8.99:0,9,76	0/0:25,1:10:8.78:0,9,45	0/0:13,0:8:5.98:0,6,47	0/1:6,8:15:4.97:85,0,5	1/1:5,4:8:5.79:36,6,0	0/1:3,4:7:11.57:60,0,12	0/0:23,0:22:22.42:0,22,153	1/1:8,7:14:0.09:118,0,0	1/1:6,3:10:3.16:41,3,0	0/1:4,0:5:3.04:3,0,20	1/1:7,1:8:14.68:90,15,0	0/0:14,0:14:15.82:0,16,119	0/0:13,2:15:11.34:0,11,81	0/1:13,4:17:1.99:115,0,2	1/1:6,14:20:20.59:132,21,0	1/1:9,16:28:11.95:102,12,0	0/1:7,8:15:26.27:129,0,26	0/1:12,2:14:31.43:42,0,31	0/1:7,4:11:8.66:75,0,9	1/1:5,2:7:8.76:45,9,0	1/1:4,2:6:11.71:72,12,0	0/1:2,3:5:0:0,0,0	0/1:11,4:15:8.86:110,0,9	0/1:9,2:12:15.78:28,0,16	1/1:10,3:12:12.94:75,13,0	1/1:12,5:18:22.56:134,23,0	0/0:2,0:2:0:0,0,0
chr10	55596481	.	GTA	G	1640.68	PASS	AB=0.895;AC=21;AF=0.618;AN=34;BaseQRankSum=2.169;DP=187;FS=2.037;HRun=0;HaplotypeScore=33.8072;InbreedingCoeff=0.4418;MQ=79.03;MQ0=4;MQRankSum=-0.031;QD=13.34;ReadPosRankSum=3.872;VQSLOD=3.2629;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,10:17:27.08:323,27,0	0/0:0,0:2:6:0,6,55	./.	0/0:19,1:13:4.15:0,4,30	1/1:1,5:6:8.86:86,9,0	./.	./.	0/1:30,2:31:75.62:76,0,655	./.	0/0:3,0:3:0.47:0,0,1	./.	1/1:2,2:4:6.02:72,6,0	1/1:1,2:3:3.01:36,3,0	1/1:3,3:5:3.01:36,3,0	0/0:4,0:4:3:0,3,25	1/1:2,6:8:18.06:216,18,0	1/1:2,22:24:36.11:431,36,0	1/1:6,8:15:35.94:409,36,0	0/0:3,0:3:2.80:0,3,13	./.	./.	1/1:1,0:1:2.94:18,3,0	1/1:4,0:4:6:60,6,0	./.	./.	./.	./.	0/0:4,0:4:3.01:0,3,43
chr10	55596530	.	ATG	A	1115.64	PASS	AC=22;AF=0.458;AN=48;BaseQRankSum=3.312;DP=205;FS=54.511;HRun=0;HaplotypeScore=43.3079;InbreedingCoeff=0.7605;MQ=84.78;MQ0=4;MQRankSum=0.972;QD=20.28;ReadPosRankSum=1.283;VQSLOD=1.4942;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:3.23:0,3,266	0/0:4,0:4:9.03:0,9,147	0/0:17,0:9:12.03:0,12,144	0/0:23,0:11:8.79:0,9,56	0/0:9,0:9:24.06:0,24,356	1/1:0,3:3:6.02:74,6,0	1/1:0,3:3:6.02:74,6,0	0/0:30,0:30:69.19:0,69,1013	./.	1/1:0,3:3:9.03:111,9,0	1/1:1,5:6:9.03:111,9,0	0/0:2,0:2:6.02:0,6,98	0/0:2,0:2:3:0,3,25	0/0:3,0:3:9.03:0,9,147	1/1:0,3:3:3.01:37,3,0	0/0:8,0:8:21.04:0,21,295	0/0:21,0:21:41.95:0,42,544	0/0:14,0:14:20.72:0,21,418	1/1:2,8:10:21.01:201,21,0	1/1:0,3:3:9.03:111,9,0	./.	./.	0/0:2,0:2:6.02:0,6,98	./.	1/1:0,8:8:18.06:221,18,0	1/1:0,5:5:15.02:159,15,0	1/1:1,4:6:11.87:125,12,0	1/1:2,3:5:6.02:74,6,0
chr10	55597408	.	T	TTCACACA	1155.56	PASS	AB=0.807;AC=15;AF=0.268;AN=56;BaseQRankSum=7.487;DP=499;FS=0.630;HRun=0;HaplotypeScore=137.3912;InbreedingCoeff=-0.2345;MQ=63.41;MQ0=13;MQRankSum=-6.531;QD=5.45;ReadPosRankSum=-3.926;VQSLOD=0.8300;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:31:59.10:0,59,655	0/1:6,0:7:48.20:48,0,90	0/0:41,0:18:51.61:0,52,639	0/0:34,0:21:52.43:0,52,680	0/0:8,0:21:44.84:0,45,440	0/1:12,0:16:37.54:38,0,214	0/1:24,0:25:99:104,0,299	0/1:19,0:19:99:215,0,409	0/1:9,0:17:99:159,0,169	0/1:9,0:14:99:150,0,239	0/0:5,0:8:10.58:0,11,120	0/1:10,0:12:15.51:16,0,216	0/0:9,0:9:27.09:0,27,573	0/0:13,0:14:36.10:0,36,629	0/1:9,1:21:99:274,0,166	0/0:12,0:18:45.72:0,46,498	0/0:12,0:24:53.83:0,54,607	0/1:12,0:16:5.22:5,0,363	0/1:15,0:17:92.94:93,0,433	0/0:2,0:4:7.57:0,8,82	0/0:19,0:18:9.89:0,10,152	0/0:8,0:17:40.58:0,41,421	0/0:12,0:19:21.48:0,21,419	0/0:18,0:28:65.10:0,65,806	0/1:5,0:10:44.94:45,0,140	0/1:18,0:17:65.13:65,0,385	0/1:6,0:12:39.84:40,0,176	1/1:1,0:5:3.01:60,3,0
chr10	55597772	.	G	GTTGTTTTGTT	16235.02	PASS	AB=1.000;AC=29;AF=0.537;AN=54;BaseQRankSum=-9.295;DP=606;FS=3.590;HRun=0;HaplotypeScore=156.9224;InbreedingCoeff=0.8935;MQ=59.73;MQ0=3;MQRankSum=-9.666;QD=49.80;ReadPosRankSum=0.046;VQSLOD=4.5961;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:72.19:0,72,1940	1/1:2,0:7:8.62:92,9,0	0/0:21,0:17:15.48:0,15,266	0/1:29,0:20:16.21:16,0,82	0/0:29,0:29:53.73:0,54,1425	1/1:11,17:31:33.11:1658,33,0	1/1:5,6:14:12.04:602,12,0	1/1:7,0:24:40.85:403,41,0	1/1:5,15:22:27.09:1356,27,0	1/1:13,14:30:42.12:1741,42,0	1/1:4,7:14:15.01:415,15,0	0/0:20,0:20:48.16:0,48,1395	0/0:23,0:23:54.14:0,54,1445	0/0:25,0:25:60.19:0,60,1670	1/1:10,12:24:27.09:1356,27,0	0/0:34,0:34:81.21:0,81,1975	0/0:35,0:35:90.25:0,90,2390	0/0:15,0:15:32.23:0,32,979	1/1:10,9:20:33.11:1398,33,0	1/1:5,12:16:24.08:1153,24,0	1/1:7,2:11:6.02:206,6,0	0/0:13,0:13:21.07:0,21,602	0/0:13,0:13:33.11:0,33,977	0/0:18,0:18:42.08:0,42,1107	1/1:5,18:23:39.13:1959,39,0	1/1:6,13:21:42.12:1683,42,0	1/1:16,20:38:45.62:2197,46,0	./.
chr10	55598394	.	G	GA	7159.83	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-12.501;DP=468;FS=4.378;HRun=7;HaplotypeScore=42.9139;InbreedingCoeff=0.9722;MQ=64.16;MQ0=2;MQRankSum=-0.667;QD=31.13;ReadPosRankSum=0.953;VQSLOD=5.0272;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:84.19:0,84,856	0/0:5,0:5:12.02:0,12,122	0/0:14,0:9:19.61:0,20,184	0/0:13,0:9:9.26:0,9,105	0/0:22,0:22:60.13:0,60,611	1/1:1,15:16:42.13:526,42,0	1/1:2,9:11:27.09:340,27,0	0/0:35,0:35:87.15:0,87,887	1/1:0,10:10:30.10:373,30,0	1/1:0,25:25:75.24:939,75,0	1/1:1,18:19:51.12:619,51,0	0/0:7,0:7:21.05:0,21,214	0/0:11,0:11:33.06:0,33,329	0/0:7,0:7:15.01:0,15,146	1/1:0,9:9:27.09:339,27,0	0/0:6,0:6:18.04:0,18,183	0/0:33,0:33:93.20:0,93,948	0/0:22,0:22:63.14:0,63,642	1/1:5,19:24:29.58:665,30,0	1/1:4,15:18:39.08:473,39,0	1/1:1,6:7:9.03:113,9,0	0/0:8,0:8:21.03:0,21,207	0/0:10,0:10:27.06:0,27,275	0/0:14,0:14:36.08:0,36,367	1/1:0,18:18:51.16:641,51,0	1/1:3,28:31:81.26:1014,81,0	1/1:0,28:28:75.22:928,75,0	1/1:2,11:12:15.05:189,15,0
chr10	55600190	.	A	ACTTCAAAAAC	22136.60	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-4.117;DP=526;FS=28.074;HRun=0;HaplotypeScore=136.2589;InbreedingCoeff=0.9768;MQ=64.36;MQ0=1;MQRankSum=-13.872;QD=91.47;ReadPosRankSum=-2.917;VQSLOD=2.6143;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:78.27:0,78,2488	1/1:4,1:7:12.04:401,12,0	0/0:18,0:15:33.14:0,33,1178	0/0:27,0:23:57.19:0,57,1642	0/0:23,0:23:63.16:0,63,1898	1/1:5,11:18:48.16:2353,48,0	1/1:3,1:9:12.04:602,12,0	1/1:15,4:32:78.21:3038,78,0	1/1:3,3:8:15.05:616,15,0	1/1:2,7:17:42.14:1705,42,0	1/1:5,11:22:48.15:2163,48,0	0/0:15,0:15:45.14:0,45,1297	0/0:12,0:12:36.12:0,36,1121	0/0:20,0:20:60.21:0,60,1804	1/1:7,7:14:39.09:1499,39,0	0/0:26,0:26:75.26:0,75,2440	0/0:35,0:35:96.33:0,96,2926	0/0:26,0:26:66.23:0,66,2006	1/1:6,3:11:24.08:857,24,0	1/1:5,11:26:51.11:2083,51,0	1/1:2,2:6:9.03:395,9,0	0/0:12,0:12:36.12:0,36,1172	0/0:22,0:22:60.21:0,60,1879	0/0:18,0:18:48.16:0,48,1560	1/1:5,7:17:33.11:1575,33,0	1/1:12,7:26:57.18:2440,57,0	1/1:6,8:20:36.12:1780,36,0	1/1:0,4:7:12.04:631,12,0
chr10	55600271	.	GA	G	1303.20	PASS	AB=0.878;AC=24;AF=0.429;AN=56;BaseQRankSum=9.352;DP=460;FS=0.480;HRun=8;HaplotypeScore=90.3935;InbreedingCoeff=0.4217;MQ=60.40;MQ0=10;MQRankSum=-6.681;QD=5.92;ReadPosRankSum=1.237;VQSLOD=0.6890;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:74.93:0,75,811	1/1:8,1:9:8.46:70,8,0	0/1:35,0:12:7.49:7,0,153	0/1:26,0:12:24.67:27,0,25	0/0:19,0:20:35.91:0,36,366	0/1:5,1:8:16.67:17,0,45	0/0:9,3:11:1.58:0,2,18	1/1:11,6:15:12.26:193,12,0	1/1:3,4:7:4.55:99,5,0	1/1:18,3:19:11.79:180,12,0	0/1:13,4:16:16.15:133,0,16	0/0:15,0:15:33.09:0,33,377	0/0:11,0:11:21.03:0,21,226	0/0:20,0:20:44.46:0,44,479	1/1:4,4:9:9.44:114,9,0	0/0:15,0:15:36.10:0,36,424	0/0:37,0:37:99:0,105,1211	0/0:28,0:29:70.79:0,71,786	1/1:4,6:10:10.37:186,10,0	1/1:11,4:15:24.66:211,25,0	1/1:3,0:3:3:28,3,0	0/0:8,0:8:7.32:0,7,169	0/0:20,0:20:38.22:0,38,445	0/0:19,0:19:50.97:0,51,563	0/1:14,2:18:5.91:70,0,6	0/1:7,5:11:21.20:71,0,21	1/1:9,2:12:2.64:82,3,0	0/0:4,0:4:2:0,2,12
chr10	55600272	.	A	AAAAAAAG	7591	PASS	AB=0.981;AC=30;AF=0.536;AN=56;BaseQRankSum=10.009;DP=473;FS=5.397;HRun=0;HaplotypeScore=137.5529;InbreedingCoeff=0.8001;MQ=60.85;MQ0=10;MQRankSum=-11.397;QD=35.64;ReadPosRankSum=-2.610;VQSLOD=3.9525;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:74.96:0,75,1404	1/1:6,3:9:21.06:512,21,0	0/0:37,0:14:19.39:0,19,318	0/1:25,0:12:6.45:6,0,54	0/0:22,0:22:36.07:0,36,654	1/1:7,1:8:1.22:454,1,0	1/1:10,2:11:21.07:650,21,0	1/1:20,0:17:36.10:718,36,0	1/1:6,0:6:15.05:262,15,0	1/1:22,1:21:30.92:546,31,0	1/1:19,3:21:42.06:935,42,0	0/0:14,0:14:33.10:0,33,645	0/0:11,0:11:21.02:0,21,300	0/0:20,0:20:45.12:0,45,776	1/1:7,2:9:15.87:369,16,0	0/0:14,0:14:36.11:0,36,770	0/0:38,0:38:99:0,105,2297	0/0:29,0:29:58.14:0,58,1382	1/1:11,0:11:24.06:343,24,0	1/1:12,2:14:27.09:577,27,0	1/1:3,0:3:3:28,3,0	0/0:8,0:8:21.02:0,21,340	0/0:19,0:19:42.10:0,42,816	0/0:18,0:18:51.12:0,51,1047	1/1:18,3:21:45.15:1280,45,0	0/1:14,0:13:9.63:190,0,10	1/1:10,1:11:21.07:548,21,0	1/1:4,0:4:6.02:172,6,0
chr10	55600278	.	A	AG	709.16	PASS	AB=0.957;AC=20;AF=0.357;AN=56;BaseQRankSum=11.959;DP=450;FS=3.992;HRun=0;HaplotypeScore=81.2448;InbreedingCoeff=0.2274;MQ=63.60;MQ0=9;MQRankSum=-8.948;QD=4.03;ReadPosRankSum=-1.194;VQSLOD=2.6494;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:87.11:0,87,1039	1/1:5,2:7:18.93:85,19,0	0/0:39,0:15:2.13:0,2,260	0/0:25,0:9:0.18:0,0,76	0/0:20,0:20:52.30:0,52,540	0/1:11,0:11:9.44:9,0,58	0/1:9,2:10:11.71:49,0,12	0/1:17,2:16:23.84:68,0,24	0/1:8,0:7:4.82:39,0,5	0/1:17,1:17:41:79,0,41	0/1:20,0:19:57.96:75,0,58	0/0:12,0:12:36.05:0,36,443	0/0:9,0:9:26.58:0,27,269	0/0:16,0:16:45.12:0,45,570	1/1:11,0:11:17.33:83,17,0	0/0:12,0:12:36.09:0,36,482	0/0:41,0:41:99:0,120,1530	0/0:27,0:27:77.84:0,78,986	0/1:12,0:12:2.56:62,0,3	1/1:11,0:11:19.93:91,20,0	1/1:2,0:2:2.22:7,2,0	0/0:8,0:8:24.03:0,24,259	0/0:17,0:17:48.03:0,48,616	0/0:19,0:19:57.11:0,57,719	0/1:17,3:20:49.50:114,0,50	0/1:12,0:11:15.33:40,0,15	1/1:7,2:9:20.12:81,20,0	0/1:5,0:5:1.24:1,0,49
chr10	55600280	.	G	GA	869.57	PASS	AB=0.981;AC=32;AF=0.593;AN=54;BaseQRankSum=8.152;DP=462;FS=8.807;HRun=14;HaplotypeScore=83.2041;InbreedingCoeff=0.6642;MQ=63.30;MQ0=8;MQRankSum=-7.213;QD=3.62;ReadPosRankSum=-3.850;VQSLOD=-0.3960;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,1:29:21.27:0,21,271	1/1:4,1:7:14.04:75,14,0	0/0:40,0:15:7.43:0,7,95	0/0:27,0:10:12.59:0,13,68	0/1:21,0:21:0.60:1,0,155	1/1:10,0:11:13.30:61,13,0	1/1:9,0:11:19.35:104,19,0	1/1:19,1:17:7.60:41,8,0	1/1:8,0:7:2.88:15,3,0	1/1:16,3:18:23.73:146,24,0	1/1:16,3:20:21.38:151,21,0	0/1:11,1:12:2.83:3,0,104	0/1:9,0:9:5.62:6,0,27	0/1:15,0:17:2.59:3,0,56	1/1:9,1:11:13.53:60,14,0	0/0:12,0:12:25.98:0,26,162	0/0:38,1:40:65.02:0,65,521	0/0:26,0:26:1.60:0,2,252	1/1:12,0:12:5.49:24,5,0	1/1:9,0:11:13.49:66,13,0	./.	0/0:8,0:8:11.81:0,12,69	0/0:14,0:17:17.27:0,17,84	0/0:18,0:19:30.17:0,30,207	1/1:17,1:22:17.65:160,18,0	1/1:13,0:13:11.87:57,12,0	1/1:8,0:9:12.76:57,13,0	1/1:5,0:5:8.40:34,8,0
chr10	55600406	.	GTGGT	G	5468.03	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=12.723;DP=374;FS=16.457;HRun=0;HaplotypeScore=69.2581;InbreedingCoeff=0.9279;MQ=52.06;MQ0=1;MQRankSum=-11.257;QD=39.62;ReadPosRankSum=1.146;VQSLOD=3.2994;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,2:31:34.39:0,34,2192	1/1:0,5:5:12.04:223,12,0	0/0:13,0:9:20.83:0,21,293	0/0:11,0:8:21.07:0,21,483	0/0:9,0:9:27.05:0,27,613	1/1:1,10:11:30.05:522,30,0	1/1:2,12:12:30.06:523,30,0	1/1:2,9:10:24.07:416,24,0	1/1:1,10:9:21.07:392,21,0	1/1:3,7:10:21.06:363,21,0	1/1:3,6:9:12.03:193,12,0	0/0:16,0:16:48.16:0,48,1276	0/0:14,0:14:42.14:0,42,1098	0/0:17,0:17:48.16:0,48,1254	1/1:0,8:9:21.07:391,21,0	0/0:17,0:17:48.15:0,48,1224	0/0:31,0:31:90.28:0,90,2329	0/0:27,0:27:78.24:0,78,1990	1/1:1,6:7:18.06:322,18,0	1/1:1,14:14:42.14:783,42,0	1/1:0,5:5:2.14:55,2,0	0/0:12,0:12:33.10:0,33,827	0/0:12,0:12:33.11:0,33,849	0/0:26,0:26:72.19:0,72,1805	1/1:0,5:4:9.03:168,9,0	1/1:1,10:12:30.10:559,30,0	1/1:0,11:11:27.09:503,27,0	1/1:0,3:1:3.01:56,3,0
chr10	55600484	.	G	GA	5356.58	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=11.581;DP=535;FS=20.840;HRun=8;HaplotypeScore=78.1565;InbreedingCoeff=0.9622;MQ=53.91;MQ0=9;MQRankSum=-9.494;QD=26.39;ReadPosRankSum=-3.239;VQSLOD=2.7519;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,120,1096	0/0:7,0:7:2.70:0,3,67	0/0:15,0:7:15.28:0,15,125	0/0:20,0:10:9.32:0,9,84	0/0:18,0:17:48.02:0,48,438	1/1:5,16:20:54.14:604,54,0	1/1:7,13:20:36.11:415,36,0	0/0:32,0:32:25.87:0,26,341	1/1:2,14:15:39.10:440,39,0	1/1:6,15:21:60.10:639,60,0	1/1:1,6:7:18.05:208,18,0	0/0:18,0:18:42:0,42,379	0/0:21,0:21:54.03:0,54,494	0/0:20,0:20:48.01:0,48,439	1/1:0,16:15:42.12:480,42,0	0/0:21,0:21:58.27:0,58,521	0/0:34,0:34:96.03:0,96,872	0/0:24,0:23:60.54:0,61,572	1/1:10,11:20:36.10:406,36,0	1/1:8,14:21:47.97:526,48,0	1/1:4,5:9:27.08:307,27,0	0/0:17,0:17:51.03:0,51,467	0/0:17,0:17:47.81:0,48,425	0/0:22,0:22:63.03:0,63,576	1/1:4,10:14:40.65:436,41,0	1/1:7,11:16:39.11:447,39,0	1/1:2,6:8:18.05:208,18,0	1/1:1,8:7:21.06:242,21,0
chr10	55600500	.	AAAAAGT	A	1925.58	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=1.585;DP=576;FS=0.000;HRun=0;HaplotypeScore=157.3772;InbreedingCoeff=0.9383;MQ=62.73;MQ0=3;MQRankSum=-3.196;QD=43.76;ReadPosRankSum=-2.754;VQSLOD=2.8363;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,138,3889	1/1:1,9:10:17.92:356,18,0	0/0:19,0:15:38.23:0,38,731	0/0:24,0:14:5.66:0,6,480	0/0:21,0:21:60.15:0,60,1617	0/0:23,0:22:66.09:0,66,1360	0/0:20,0:20:45.10:0,45,1096	1/1:1,33:34:99:1689,99,0	0/0:20,0:19:51.06:0,51,1225	0/0:23,0:23:69.07:0,69,1579	0/0:9,0:9:26.81:0,27,596	0/0:17,0:17:51.14:0,51,1499	0/0:22,0:22:63.13:0,63,1741	0/0:18,0:18:51.15:0,51,1559	0/0:20,0:19:54.10:0,54,1303	0/0:25,0:25:72.23:0,72,2154	0/0:38,0:38:99:0,114,3561	0/0:20,0:20:54.08:0,54,1514	0/0:17,0:16:43.73:0,44,710	0/0:20,0:19:53.41:0,53,1159	0/0:15,0:15:42.08:0,42,701	0/0:20,0:20:60.13:0,60,1624	0/0:22,0:22:65.72:0,66,1646	0/0:19,0:19:48.13:0,48,1592	0/0:14,0:14:42.14:0,42,1032	0/0:18,0:17:48.16:0,48,1222	0/0:11,0:11:33.01:0,33,581	0/0:9,0:7:21.07:0,21,543
chr10	55600526	.	GA	G	8260.13	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=12.297;DP=628;FS=15.846;HRun=3;HaplotypeScore=87.4505;InbreedingCoeff=0.9992;MQ=64.09;MQ0=1;MQRankSum=-6.917;QD=32.52;ReadPosRankSum=1.253;VQSLOD=3.4244;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,160,2252	0/0:14,0:14:33.11:0,33,475	0/0:28,0:26:78.18:0,78,1090	0/0:26,0:20:55.88:0,56,632	0/0:18,0:18:54.17:0,54,759	1/1:1,28:29:75.23:929,75,0	1/1:1,18:19:36.11:446,36,0	0/0:35,0:33:96.16:0,96,1268	1/1:2,22:24:69.19:830,69,0	1/1:3,24:27:72.22:890,72,0	1/1:0,13:13:27.08:335,27,0	0/0:24,0:24:72.24:0,72,1037	0/0:22,0:22:66.22:0,66,950	0/0:15,0:15:42.14:0,42,601	1/1:0,22:22:63.20:780,63,0	0/0:20,0:20:60.17:0,60,842	0/0:31,0:31:93.30:0,93,1320	0/0:17,0:17:51.13:0,51,695	1/1:1,15:16:42.13:520,42,0	1/1:1,20:21:57.18:706,57,0	1/1:1,20:21:48.15:595,48,0	0/0:26,0:26:78.25:0,78,1105	0/0:24,0:24:69.22:0,69,975	0/0:19,0:19:57.18:0,57,801	1/1:0,18:18:54.17:668,54,0	1/1:2,18:20:54.17:669,54,0	1/1:0,17:17:51.16:632,51,0	1/1:0,7:7:21.07:260,21,0
chr10	55601879	.	GT	G	6785.88	PASS	AB=0.538;AC=25;AF=0.446;AN=56;BaseQRankSum=13.630;DP=665;FS=11.228;HRun=10;HaplotypeScore=66.2618;InbreedingCoeff=0.9163;MQ=75.58;MQ0=0;MQRankSum=0.042;QD=21.41;ReadPosRankSum=1.783;VQSLOD=5.3676;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,123,1316	0/0:11,0:11:29.92:0,30,302	0/0:15,0:15:11.45:0,11,147	0/0:11,0:11:20.87:0,21,201	0/0:25,2:27:8.03:0,8,529	1/1:4,24:28:29.79:488,30,0	1/1:3,23:26:68.98:599,69,0	0/0:27,0:27:69.18:0,69,756	1/1:3,30:33:74.98:651,75,0	1/1:2,19:21:56.98:495,57,0	1/1:3,22:25:59.97:521,60,0	0/0:33,0:33:87.21:0,87,940	0/0:27,0:27:69.18:0,69,759	0/0:25,0:25:69.18:0,69,755	1/1:2,29:31:83.98:729,84,0	0/0:28,0:28:78.10:0,78,815	0/0:26,1:27:43.07:0,43,674	0/0:9,0:9:24.02:0,24,252	1/1:6,10:16:32.96:284,33,0	1/1:0,17:17:50.99:443,51,0	1/1:5,19:24:56.98:495,57,0	0/0:21,0:20:51.14:0,51,564	0/0:14,0:14:39.10:0,39,424	0/0:26,0:26:63.17:0,63,697	1/1:2,22:24:32.89:514,33,0	1/1:5,29:34:86.97:755,87,0	1/1:4,27:31:77.98:677,78,0	0/1:1,6:7:12.18:135,0,12
chr10	55602257	.	GC	G	8141.99	PASS	AC=48;AF=1.000;AN=48;BaseQRankSum=-1.717;DP=270;FS=0.000;HRun=4;HaplotypeScore=37.4589;InbreedingCoeff=-0.0059;MQ=47.29;MQ0=11;MQRankSum=0.105;QD=30.49;ReadPosRankSum=1.145;VQSLOD=4.2849;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,16:17:48.15:575,48,0	./.	./.	./.	1/1:0,12:12:33.57:391,34,0	1/1:0,10:10:27.08:323,27,0	1/1:4,10:12:32.69:369,33,0	./.	1/1:1,6:6:15.05:179,15,0	1/1:0,18:18:54.17:647,54,0	1/1:1,12:12:27.08:323,27,0	1/1:0,17:17:45.14:540,45,0	1/1:0,13:13:33.10:394,33,0	1/1:0,15:15:36.11:431,36,0	1/1:2,9:10:24.07:288,24,0	1/1:0,11:11:33.10:391,33,0	1/1:0,7:7:18.06:216,18,0	1/1:1,6:7:18.06:216,18,0	1/1:1,13:13:39.09:448,39,0	1/1:1,9:10:27.08:317,27,0	1/1:0,10:10:27.08:324,27,0	1/1:0,7:7:15.05:179,15,0	1/1:1,5:6:15.05:178,15,0	1/1:1,11:12:10.97:337,11,0	1/1:0,7:7:21.06:252,21,0	1/1:2,10:10:27.08:322,27,0	1/1:1,10:10:30.09:359,30,0	1/1:1,5:5:12.04:144,12,0
chr10	55602444	.	T	TG	5587.05	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=13.393;DP=559;FS=4.077;HRun=0;HaplotypeScore=101.2283;InbreedingCoeff=0.9983;MQ=87.28;MQ0=0;MQRankSum=-1.702;QD=37.00;ReadPosRankSum=3.456;VQSLOD=4.7336;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,15:18:44.62:655,45,0	0/0:10,0:10:30.10:0,30,417	0/0:26,0:26:74.89:0,75,988	0/0:22,0:20:54.15:0,54,729	1/1:2,28:30:62.89:1007,63,0	0/0:22,0:22:60.17:0,60,818	0/0:20,0:20:60.16:0,60,812	0/0:44,0:44:99:0,123,1626	0/0:19,0:19:51.17:0,51,711	0/0:22,0:22:63.21:0,63,878	0/0:26,0:26:78.26:0,78,1088	1/1:1,15:16:42.14:670,42,0	0/0:16,0:16:48.10:0,48,629	0/0:17,0:17:48.16:0,48,669	0/0:18,0:18:54.18:0,54,755	1/1:2,20:22:57.19:908,57,0	1/1:0,11:11:27.09:431,27,0	1/1:0,6:6:18.06:287,18,0	0/0:17,0:17:42.14:0,42,587	0/0:22,0:22:66.21:0,66,906	0/0:26,0:26:78.25:0,78,1072	1/1:0,17:17:36.12:575,36,0	1/1:1,18:19:39.13:623,39,0	1/1:0,12:12:26.85:431,27,0	0/0:15,0:15:42.14:0,42,588	0/0:30,0:30:84.25:0,84,1140	0/0:24,0:23:69.07:0,69,878	0/0:12,0:12:36.12:0,36,504
chr10	55602844	.	AACTG	A	1351.56	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.243;DP=446;FS=6.099;HRun=0;HaplotypeScore=71.7545;InbreedingCoeff=0.9085;MQ=75.83;MQ0=0;MQRankSum=-4.304;QD=38.62;ReadPosRankSum=-4.299;VQSLOD=2.2370;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:69.24:0,69,1819	1/1:1,2:3:6.02:112,6,0	0/0:10,0:10:21.95:0,22,499	0/0:9,0:9:27.08:0,27,527	0/0:24,0:24:69.24:0,69,1795	0/0:17,0:17:48.16:0,48,1207	0/0:12,0:12:33.09:0,33,762	1/1:4,28:31:81.21:1351,81,0	0/0:9,0:9:24.08:0,24,632	0/0:17,0:17:48.16:0,48,1231	0/0:24,0:24:66.21:0,66,1703	0/0:16,0:16:39.13:0,39,1010	0/0:19,0:19:54.17:0,54,1350	0/0:9,0:9:24.08:0,24,639	0/0:27,0:27:75.24:0,75,1944	0/0:15,0:15:42.13:0,42,1037	0/0:13,0:13:36.12:0,36,952	0/0:10,0:10:30.10:0,30,800	0/0:13,0:13:39.13:0,39,1023	0/0:17,0:17:48.16:0,48,1266	0/0:17,0:17:48.16:0,48,1280	0/0:9,0:9:24.08:0,24,631	0/0:18,0:18:48.16:0,48,1227	0/0:5,0:5:9.03:0,9,240	0/0:12,0:12:30.10:0,30,800	0/0:21,0:21:63.21:0,63,1621	0/0:30,0:30:87.27:0,87,2207	0/0:13,0:13:33.09:0,33,763
chr10	55603091	.	C	CA	3935.50	PASS	AC=26;AF=0.481;AN=54;BaseQRankSum=13.466;DP=297;FS=13.992;HRun=1;HaplotypeScore=67.7749;InbreedingCoeff=0.8972;MQ=58.66;MQ0=1;MQRankSum=-3.278;QD=35.78;ReadPosRankSum=3.877;VQSLOD=2.6552;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:81.23:0,81,1095	./.	0/0:12,0:7:14.61:0,15,246	0/0:7,0:6:14.84:0,15,180	0/0:18,0:18:54.18:0,54,755	1/1:0,11:11:30.10:412,30,0	1/1:0,8:7:18.06:249,18,0	0/0:43,0:43:99:0,129,1790	1/1:0,9:9:27.09:371,27,0	1/1:0,8:8:24.08:341,24,0	1/1:0,12:12:27.09:365,27,0	0/0:11,0:11:33.11:0,33,461	0/0:9,0:9:27.09:0,27,377	0/0:3,0:3:9.03:0,9,126	1/1:0,13:13:33.11:454,33,0	0/0:8,0:8:24.08:0,24,336	0/0:15,0:15:42.14:0,42,581	0/0:22,0:22:63.21:0,63,881	1/1:0,11:10:30.06:396,30,0	1/1:0,2:2:6.02:82,6,0	1/1:0,2:2:3.01:40,3,0	0/0:2,0:2:6.02:0,6,84	0/0:4,0:4:12.04:0,12,167	0/0:6,0:6:18.05:0,18,233	1/1:0,8:8:15.05:205,15,0	1/1:0,16:16:48.13:652,48,0	1/1:0,8:8:24.08:328,24,0	1/1:0,2:2:3.01:41,3,0
chr10	55604743	.	G	GA	4901.24	PASS	AB=0.840;AC=32;AF=0.571;AN=56;BaseQRankSum=-9.754;DP=508;FS=11.205;HRun=12;HaplotypeScore=58.8505;InbreedingCoeff=0.6629;MQ=66.65;MQ0=3;MQRankSum=0.891;QD=16.23;ReadPosRankSum=-1.948;VQSLOD=4.6279;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,1:30:64.76:0,65,453	1/1:0,6:7:20.87:189,21,0	0/0:28,0:13:26.34:0,26,159	0/0:20,0:16:23.56:0,24,164	0/0:19,1:20:15.52:0,16,277	1/1:4,20:24:32.18:474,32,0	1/1:3,10:13:23.87:217,24,0	1/1:10,17:27:47.42:431,47,0	1/1:1,9:10:18.03:175,18,0	1/1:3,11:15:32.85:293,33,0	1/1:5,13:18:38.85:355,39,0	0/0:16,0:16:22.30:0,22,260	0/0:18,1:20:11.41:0,11,237	0/0:10,0:10:29.83:0,30,219	1/1:4,12:16:42.05:400,42,0	0/1:11,1:12:2.35:2,0,148	0/0:22,3:26:3.58:0,4,341	0/0:22,0:24:57.25:0,57,389	1/1:13,9:25:9.39:348,9,0	1/1:11,8:19:28.55:257,29,0	1/1:0,4:4:6.01:58,6,0	0/0:11,0:12:25.81:0,26,175	0/1:13,2:15:22.58:23,0,182	0/1:9,2:11:31.50:32,0,126	1/1:6,20:26:35.15:495,35,0	1/1:6,14:20:4.25:365,4,0	0/1:10,6:17:44.45:264,0,44	1/1:3,18:23:56.76:524,57,0
chr10	55606214	.	C	CAAG	19619.50	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-16.023;DP=819;FS=2.263;HRun=0;HaplotypeScore=108.1980;InbreedingCoeff=0.9856;MQ=88.96;MQ0=0;MQRankSum=-7.349;QD=52.88;ReadPosRankSum=3.700;VQSLOD=7.1875;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,120,1914	0/0:23,0:23:66.21:0,66,1053	0/0:33,0:34:82.52:0,83,1310	0/0:28,0:29:63.16:0,63,954	0/0:24,0:24:60.20:0,60,974	1/1:4,22:27:63.08:1308,63,0	1/1:3,29:32:78.22:1664,78,0	0/0:39,0:39:99:0,102,1558	1/1:2,28:30:81.28:1809,81,0	1/1:4,28:33:90.31:1992,90,0	1/1:3,14:17:39.05:761,39,0	0/0:34,0:34:99:0,99,1588	0/0:29,0:29:78.25:0,78,1237	0/0:30,0:30:87.28:0,87,1394	1/1:3,41:45:99:2246,105,0	0/0:37,0:37:99:0,102,1544	0/0:30,0:30:84.27:0,84,1341	0/0:17,0:17:42.09:0,42,655	1/1:0,21:23:66.22:1362,66,0	1/1:0,25:25:66.07:1286,66,0	1/1:7,28:35:76.38:1581,76,0	0/0:31,0:31:84.29:0,84,1367	0/0:17,0:17:48.12:0,48,721	0/0:27,0:27:75.26:0,75,1220	1/1:4,23:28:69.17:1490,69,0	1/1:1,25:27:75.24:1628,75,0	1/1:4,39:43:99:2359,108,0	1/1:2,4:6:6.02:134,6,0
chr10	55607534	.	CAAAA	C	4892.75	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-2.423;DP=365;FS=41.288;HRun=16;HaplotypeScore=75.4828;InbreedingCoeff=0.9313;MQ=76.28;MQ0=2;MQRankSum=-4.260;QD=26.74;ReadPosRankSum=7.751;VQSLOD=0.4641;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:17:33.10:0,33,642	0/0:1,0:3:8.80:0,9,53	0/0:30,0:17:30.10:0,30,301	0/0:17,0:14:13.14:0,13,157	0/0:14,0:14:33.07:0,33,666	1/1:1,11:13:25.28:319,25,0	1/1:2,8:11:23.99:300,24,0	0/0:11,0:17:29.50:0,30,197	1/1:5,9:13:26.94:355,27,0	1/1:2,12:15:37.22:460,37,0	1/1:1,12:15:37.26:460,37,0	0/0:3,0:4:6.02:0,6,114	0/0:8,0:8:18.05:0,18,299	0/0:4,0:5:12.04:0,12,238	1/1:3,10:13:30.03:394,30,0	0/0:3,0:4:12.04:0,12,261	0/0:16,0:20:48.08:0,48,972	0/0:10,0:13:27.09:0,27,511	1/1:4,11:16:35.94:470,36,0	1/1:8,8:18:21.99:263,22,0	1/1:4,1:6:2.81:39,3,0	0/0:5,0:8:11.99:0,12,155	0/0:7,0:11:24.08:0,24,473	0/0:10,0:11:27.09:0,27,520	1/1:3,20:23:51.01:670,51,0	1/1:3,14:17:42.06:533,42,0	1/1:5,12:17:32.99:433,33,0	1/1:0,5:5:15.05:197,15,0
chr10	55607575	.	C	CG	434.71	PASS	AC=4;AF=0.074;AN=54;BaseQRankSum=-5.015;DP=220;FS=0.000;HRun=5;HaplotypeScore=46.1881;InbreedingCoeff=0.6595;MQ=61.63;MQ0=1;MQRankSum=1.867;QD=28.98;ReadPosRankSum=-2.952;VQSLOD=2.2713;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:18.05:0,18,193	1/1:0,1:1:3.01:39,3,0	0/0:9,0:5:11.99:0,12,109	0/0:10,0:9:23.89:0,24,222	0/0:7,0:7:18.05:0,18,193	0/0:11,0:11:27.07:0,27,290	0/0:10,0:10:24.06:0,24,257	1/1:2,12:14:39.12:503,39,0	0/0:9,0:9:21.05:0,21,224	0/0:11,0:11:30.07:0,30,321	0/0:8,0:8:18.04:0,18,192	0/0:1,0:1:3.01:0,3,32	0/0:4,0:4:12.03:0,12,129	0/0:3,0:3:9.02:0,9,97	0/0:12,0:12:30.07:0,30,322	./.	0/0:10,0:10:30.08:0,30,322	0/0:5,0:5:12.03:0,12,128	0/0:19,0:19:42.07:0,42,433	0/0:11,0:11:24.04:0,24,249	0/0:6,0:6:18.05:0,18,193	0/0:1,0:1:3.01:0,3,32	0/0:6,0:6:18.05:0,18,193	0/0:5,0:5:15.04:0,15,159	0/0:12,0:12:30.03:0,30,309	0/0:9,0:9:18.04:0,18,193	0/0:11,0:11:27.07:0,27,289	0/0:6,0:6:12.03:0,12,129
chr10	55609188	.	GA	G	4943.81	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=5.940;DP=372;FS=21.851;HRun=4;HaplotypeScore=43.4847;InbreedingCoeff=0.9686;MQ=82.33;MQ0=0;MQRankSum=-1.753;QD=29.08;ReadPosRankSum=1.120;VQSLOD=2.8916;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:90.30:0,90,1257	0/0:2,0:2:6.02:0,6,84	0/0:12,0:12:32.89:0,33,373	0/0:17,0:17:30.95:0,31,503	0/0:13,0:13:33.11:0,33,462	1/1:1,14:15:33.10:396,33,0	1/1:0,11:11:27.08:324,27,0	0/0:24,0:24:60.20:0,60,840	1/1:2,6:8:21.06:247,21,0	1/1:0,7:7:21.06:251,21,0	1/1:0,10:10:21.06:252,21,0	0/0:13,0:13:36.12:0,36,503	0/0:8,0:8:21.06:0,21,279	0/0:13,0:13:36.11:0,36,488	1/1:2,18:20:45.14:540,45,0	0/0:14,0:14:39.13:0,39,546	0/0:19,0:19:57.17:0,57,764	0/0:4,0:4:12.04:0,12,168	1/1:1,15:16:42.09:488,42,0	1/1:2,8:10:21.06:252,21,0	1/1:0,13:13:33.10:395,33,0	0/0:3,0:3:9.03:0,9,125	0/0:8,0:8:18.01:0,18,214	0/0:18,0:18:48.12:0,48,648	1/1:2,10:12:21.06:252,21,0	1/1:1,16:17:48.15:576,48,0	1/1:0,20:19:48.15:575,48,0	1/1:0,11:11:33.10:396,33,0
chr10	55610656	.	A	ATATAAG	1443.69	PASS	AB=0.940;AC=16;AF=0.348;AN=46;BaseQRankSum=7.614;DP=318;FS=27.432;HRun=0;HaplotypeScore=101.2476;InbreedingCoeff=0.6222;MQ=58.50;MQ0=1;MQRankSum=-7.320;QD=22.21;ReadPosRankSum=-1.140;VQSLOD=1.0166;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,123,2898	0/0:8,0:8:21.07:0,21,505	0/0:20,0:19:53.12:0,53,1209	0/0:12,0:10:24.08:0,24,531	0/1:19,3:22:99:155,0,1185	0/0:1,0:1:1.25:0,1,3	./.	0/0:43,0:43:99:0,120,2627	./.	1/1:2,1:3:3.48:109,3,0	./.	0/0:12,0:12:33.11:0,33,793	0/0:14,0:14:39.13:0,39,938	0/0:6,0:6:15.05:0,15,360	./.	0/0:18,0:17:48.16:0,48,1102	0/0:38,0:38:54.48:0,54,2104	0/1:20,0:20:21.79:22,0,934	1/1:3,2:5:9.90:257,10,0	1/1:2,1:3:2.95:123,3,0	./.	0/0:8,0:8:24.08:0,24,534	0/0:9,0:9:27.09:0,27,649	0/0:21,0:21:56.92:0,57,1288	1/1:1,3:4:12:343,12,0	1/1:0,1:1:3.01:108,3,0	1/1:0,1:1:3.01:108,3,0	1/1:2,4:6:16.78:378,17,0
chr10	55610676	.	G	GAT	196.13	PASS	AC=10;AF=0.238;AN=42;BaseQRankSum=5.239;DP=336;FS=1.372;HRun=0;HaplotypeScore=74.3544;InbreedingCoeff=0.7534;MQ=63.02;MQ0=1;MQRankSum=-2.976;QD=24.52;ReadPosRankSum=-1.889;VQSLOD=3.6286;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,120,1813	0/0:10,0:10:27.08:0,27,392	0/0:22,0:21:34.05:0,34,729	0/0:19,0:17:43.87:0,44,659	0/0:21,1:22:15.59:0,16,774	./.	./.	0/0:41,0:40:99:0,114,1725	./.	1/1:0,1:1:3.01:43,3,0	./.	0/0:14,0:14:39.08:0,39,570	0/0:14,0:14:42.14:0,42,642	0/0:12,0:12:33.09:0,33,482	./.	0/0:23,0:22:66.22:0,66,1008	0/0:39,0:39:99:0,105,1576	0/0:22,0:22:66.19:0,66,984	1/1:3,0:3:9.03:152,9,0	0/0:1,0:1:2.90:0,3,16	./.	0/0:10,0:10:30.10:0,30,459	0/0:14,0:14:39.13:0,39,597	0/0:22,0:22:59.89:0,60,869	1/1:0,2:2:6.02:82,6,0	1/1:1,0:1:0.47:1,0,0	1/1:0,1:1:3.01:40,3,0	./.
chr10	55610678	.	C	CACCAG	244.55	PASS	AB=0.955;AC=9;AF=0.237;AN=38;BaseQRankSum=4.069;DP=339;FS=7.381;HRun=0;HaplotypeScore=100.4538;InbreedingCoeff=0.7038;MQ=62.95;MQ0=4;MQRankSum=-4.129;QD=9.41;ReadPosRankSum=-1.858;VQSLOD=1.3391;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,123,2685	0/0:10,0:10:27.09:0,27,592	0/0:23,0:21:57.18:0,57,1051	0/0:20,0:17:50.84:0,51,964	0/1:20,1:21:0.94:1,0,1096	./.	./.	0/0:41,0:40:99:0,117,2420	./.	1/1:0,1:1:3.01:82,3,0	./.	0/0:15,0:15:42.13:0,42,881	0/0:15,0:15:42.14:0,42,935	0/0:12,0:12:33.11:0,33,726	./.	0/0:23,0:22:69.21:0,69,1454	0/0:40,0:40:99:0,111,2310	0/0:22,0:22:66.23:0,66,1460	1/1:1,0:1:3.01:39,3,0	./.	./.	0/0:10,0:10:30.10:0,30,669	0/0:14,0:14:39.13:0,39,869	0/0:22,0:22:57.15:0,57,1240	1/1:0,2:2:6.02:160,6,0	./.	1/1:0,1:1:3.01:78,3,0	./.
chr10	55611109	.	CAA	C	1389.28	PASS	AB=0.818;AC=25;AF=0.463;AN=54;BaseQRankSum=-0.471;DP=391;FS=7.523;HRun=13;HaplotypeScore=52.0885;InbreedingCoeff=0.7150;MQ=36.85;MQ0=40;MQRankSum=-2.404;QD=8.27;ReadPosRankSum=5.251;VQSLOD=0.0395;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:22:34.19:0,34,351	0/0:7,0:7:8.88:0,9,88	./.	0/0:21,0:5:7.94:0,8,61	0/0:18,0:16:20.39:0,20,220	1/1:1,10:11:18.01:224,18,0	1/1:7,6:13:10.67:142,11,0	0/0:26,1:24:30.55:0,31,653	1/1:12,6:12:17.22:153,17,0	1/1:5,4:10:14.71:122,15,0	1/1:1,2:3:2.99:29,3,0	0/0:12,0:7:2.78:0,3,13	0/1:7,0:7:0.14:0,0,63	0/0:8,0:5:12.02:0,12,128	1/1:9,7:12:8.96:81,9,0	0/0:10,0:6:14.64:0,15,181	0/0:16,0:13:11.35:0,11,87	0/0:16,0:13:23.94:0,24,262	1/1:12,9:17:26.92:253,27,0	0/0:7,0:3:0:0,0,0	1/1:13,1:5:3.46:30,3,0	0/0:12,0:10:11.92:0,12,106	0/0:15,0:10:4.61:0,5,125	0/0:11,0:7:3:0,3,26	1/1:3,2:2:3:29,3,0	1/1:8,6:11:20.98:199,21,0	1/1:11,9:20:32.55:286,33,0	1/1:7,1:1:3:29,3,0
chr10	55611137	.	AAAAAAAAAAC	A	2483.46	PASS	AB=0.948;AC=19;AF=0.339;AN=56;BaseQRankSum=10.421;DP=493;FS=29.245;HRun=0;HaplotypeScore=120.2589;InbreedingCoeff=0.3705;MQ=45.97;MQ0=27;MQRankSum=-0.919;QD=11.04;ReadPosRankSum=3.374;VQSLOD=0.7133;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:29:54.50:0,54,1634	0/0:5,0:5:14.25:0,14,424	0/1:33,0:5:15.21:15,0,99	0/0:28,0:6:11.36:0,11,276	0/0:26,0:24:62.99:0,63,1831	1/1:20,0:19:12.29:446,12,0	1/1:16,0:15:26.81:410,27,0	0/0:34,0:32:81.85:0,82,2573	0/1:22,0:16:28.93:82,0,29	0/1:7,0:6:26.85:27,0,47	1/1:7,0:7:14.95:172,15,0	0/0:14,0:10:24.07:0,24,629	0/0:10,0:8:19.88:0,20,346	0/0:8,0:7:21.07:0,21,691	0/1:7,7:13:13.96:75,0,14	0/0:16,0:12:36.07:0,36,789	0/0:26,0:22:43.69:0,44,1388	0/0:19,0:16:33.09:0,33,1172	0/1:27,0:22:73.06:329,0,73	0/1:7,0:4:8.82:57,0,9	1/1:12,0:7:7.50:126,8,0	0/0:10,0:8:15.05:0,15,520	0/0:14,0:8:18.06:0,18,499	0/0:14,0:10:9.03:0,9,264	1/1:9,1:8:0.34:227,0,0	1/1:17,0:14:26.11:316,26,0	0/1:32,1:31:12.04:385,0,12	0/0:9,0:4:8.97:0,9,88
chr10	55611138	.	AAAAAAAAAC	A	4292.14	PASS	AB=0.878;AC=22;AF=0.393;AN=56;BaseQRankSum=7.670;DP=480;FS=24.459;HRun=0;HaplotypeScore=107.2216;InbreedingCoeff=0.6316;MQ=46.67;MQ0=21;MQRankSum=-2.010;QD=19.78;ReadPosRankSum=3.169;VQSLOD=2.3314;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:29:54.13:0,54,1444	0/0:5,0:5:13.85:0,14,381	0/1:32,0:5:15.51:16,0,94	0/0:27,0:6:11.46:0,11,235	0/0:27,0:25:63.03:0,63,1622	1/1:5,14:19:29.59:745,30,0	1/1:3,13:15:26.87:660,27,0	0/0:32,0:30:79.47:0,79,2273	0/1:14,8:16:13.17:141,0,13	0/1:8,0:7:7.58:66,0,8	1/1:0,7:7:14.97:258,15,0	0/0:13,0:10:24.07:0,24,566	0/0:11,0:9:21.03:0,21,328	0/0:7,0:7:21.07:0,21,647	1/1:14,0:13:2.50:60,3,0	0/0:16,0:12:36.05:0,36,700	0/0:25,0:22:43.38:0,43,1231	0/0:19,0:16:33.09:0,33,1048	1/1:24,2:21:14.16:554,14,0	0/1:5,2:4:9.32:85,0,9	1/1:10,0:6:11.25:241,11,0	0/0:10,0:8:15.05:0,15,448	0/0:14,0:8:18.06:0,18,418	0/0:14,0:10:9.03:0,9,222	1/1:8,2:8:3.02:341,3,0	1/1:3,12:13:32.15:585,32,0	1/1:10,21:29:23.53:540,24,0	0/0:8,0:4:8.97:0,9,88
chr10	55611392	.	C	CA	966.03	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-8.495;DP=349;FS=1.519;HRun=7;HaplotypeScore=54.7851;InbreedingCoeff=0.8064;MQ=71.83;MQ0=0;MQRankSum=1.068;QD=28.41;ReadPosRankSum=-3.326;VQSLOD=2.9572;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:78.13:0,78,753	1/1:0,5:5:12.04:145,12,0	0/0:10,0:10:14.65:0,15,115	0/0:5,0:4:6:0,6,53	0/0:28,0:29:83.15:0,83,782	0/0:10,0:10:24.02:0,24,226	0/0:7,0:7:15.02:0,15,145	1/1:3,26:29:78.24:937,78,0	0/0:7,0:7:15.02:0,15,145	0/0:9,0:9:27.04:0,27,260	0/0:6,0:6:18.03:0,18,174	0/0:20,0:20:54.04:0,54,513	0/0:14,0:14:39.06:0,39,377	0/0:18,0:18:51.08:0,51,492	0/0:8,0:8:24.04:0,24,232	0/0:15,0:15:39.05:0,39,371	0/0:18,0:18:51.07:0,51,487	0/0:10,0:10:30.05:0,30,290	0/0:10,0:10:27.04:0,27,261	0/0:4,0:4:12.02:0,12,116	0/0:8,0:8:18.03:0,18,174	0/0:16,0:16:39.06:0,39,376	0/0:19,0:19:54.06:0,54,514	0/0:12,0:12:36.06:0,36,348	0/0:6,0:6:18.03:0,18,174	0/0:5,0:5:15.02:0,15,145	0/0:20,0:19:54.08:0,54,521	0/0:2,0:2:3:0,3,29
chr10	55611457	.	T	TTA	1365.79	PASS	AB=0.766;AC=12;AF=0.214;AN=56;BaseQRankSum=10.319;DP=443;FS=171.136;HRun=0;HaplotypeScore=74.5921;InbreedingCoeff=-0.0950;MQ=52.64;MQ0=14;MQRankSum=-9.269;QD=10.51;ReadPosRankSum=1.082;VQSLOD=0.6098;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:34:99:0,102,1634	0/0:9,0:9:24.08:0,24,391	0/0:8,0:3:3.01:0,3,38	0/0:6,0:5:14.94:0,15,189	0/0:22,0:22:63.22:0,63,1022	0/1:5,5:10:99:182,0,168	0/1:13,4:15:99:107,0,401	0/0:31,0:30:78.27:0,78,1261	1/1:0,3:3:9.03:135,9,0	0/1:13,2:12:85.56:86,0,453	0/0:12,0:10:23.89:0,24,390	0/0:22,0:22:66.20:0,66,1039	0/0:12,0:12:36.12:0,36,587	0/0:20,0:20:60.20:0,60,973	0/1:11,6:16:99:201,0,394	0/0:19,0:18:54.18:0,54,881	0/0:27,0:27:72.21:0,72,1158	0/0:17,0:17:51.17:0,51,832	0/1:7,4:9:99:216,0,203	0/0:7,0:7:21.07:0,21,339	0/1:6,4:9:70.14:70,0,170	0/0:23,0:23:66.21:0,66,1045	0/0:22,0:21:60.20:0,60,979	0/0:21,0:21:63.22:0,63,1028	0/1:9,2:11:50.03:50,0,269	0/1:16,3:18:99:131,0,634	0/1:4,6:9:48.54:293,0,49	0/1:5,2:7:48.77:49,0,135
chr10	55611525	.	G	GA	1898.93	PASS	AB=0.579;AC=25;AF=0.446;AN=56;BaseQRankSum=11.793;DP=437;FS=51.602;HRun=4;HaplotypeScore=48.4714;InbreedingCoeff=0.8769;MQ=66.28;MQ0=4;MQRankSum=-1.884;QD=14.17;ReadPosRankSum=-2.196;VQSLOD=-0.3457;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:23:66.18:0,66,802	0/0:12,0:12:36.11:0,36,446	0/0:12,0:9:12.06:0,12,228	0/0:10,0:5:15.04:0,15,177	0/0:30,0:30:75.22:0,75,913	1/1:6,3:9:9.03:102,9,0	1/1:5,8:12:15.04:165,15,0	0/0:38,0:38:99:0,111,1339	1/1:0,4:4:9.02:100,9,0	1/1:7,8:16:20.26:298,20,0	1/1:8,6:11:16.80:172,17,0	0/0:18,0:18:54.16:0,54,656	0/0:16,0:16:45.14:0,45,558	0/0:18,0:18:54.17:0,54,669	1/1:4,4:7:15.03:161,15,0	0/0:21,0:21:60.16:0,60,718	0/0:28,0:28:84.26:0,84,1036	0/0:23,0:23:63.19:0,63,772	1/1:1,3:4:9.03:109,9,0	1/1:4,1:6:5.28:46,5,0	1/1:1,13:13:24.07:273,24,0	0/0:18,0:18:51.16:0,51,630	0/0:17,0:17:45.14:0,45,557	0/0:18,0:18:54.17:0,54,670	0/1:3,8:10:9.04:90,0,9	1/1:11,5:15:18.46:257,18,0	1/1:3,8:10:19.61:207,20,0	1/1:4,2:7:14.30:139,14,0
chr10	55611949	.	TACACACACACAC	T	1101.46	PASS	AB=0.926;AC=26;AF=0.520;AN=50;BaseQRankSum=3.206;DP=540;FS=7.252;HRun=0;HaplotypeScore=181.6322;InbreedingCoeff=0.0249;MQ=67.79;MQ0=21;MQRankSum=-0.276;QD=3.51;ReadPosRankSum=3.653;VQSLOD=1.7967;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:34,15:48:2.77:54,3,0	0/1:5,0:9:0:0,0,0	./.	./.	0/0:7,9:15:2.99:0,3,23	0/0:17,0:17:5.91:0,6,46	0/0:14,0:16:9.03:0,9,154	0/0:23,0:18:9.89:0,10,115	0/1:19,0:19:18.60:110,0,19	1/1:13,0:11:1.96:119,2,0	0/1:14,0:14:4.65:5,0,36	1/1:12,2:13:3.01:88,3,0	0/0:15,0:15:19.74:0,20,710	0/0:26,0:26:21.07:0,21,962	0/1:20,1:19:80.28:80,0,87	1/1:11,9:19:3.01:103,3,0	1/1:21,11:31:4.30:169,4,0	1/1:8,3:11:6.02:205,6,0	0/1:7,0:7:2.83:3,0,49	1/1:13,0:11:6:52,6,0	0/1:23,0:22:12.45:12,0,60	1/1:6,8:14:2.62:102,3,0	./.	0/0:30,12:41:2.96:0,3,19	0/1:8,0:7:17.21:17,0,45	0/1:19,0:19:56.46:56,0,127	0/1:11,0:12:47.71:48,0,61	0/1:9,0:9:24.45:24,0,26
chr10	55612952	.	CA	C	7730.59	PASS	AB=0.993;AC=51;AF=0.911;AN=56;BaseQRankSum=4.538;DP=747;FS=14.018;HRun=1;HaplotypeScore=140.2173;InbreedingCoeff=-0.0926;MQ=80.36;MQ0=0;MQRankSum=-3.645;QD=10.35;ReadPosRankSum=8.978;VQSLOD=0.7927;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:40,0:40:83.09:461,83,0	1/1:8,0:8:13.83:63,14,0	0/1:20,0:20:56.56:57,0,131	0/1:17,0:17:56.04:56,0,108	1/1:28,1:29:16.19:291,16,0	1/1:26,1:26:72.03:351,72,0	1/1:17,0:17:19.11:157,19,0	0/1:28,0:28:14.31:151,0,14	1/1:31,0:31:33.31:300,33,0	1/1:30,0:30:73.63:311,74,0	1/1:29,0:29:74.32:334,74,0	0/1:27,1:28:4.12:229,0,4	1/1:35,0:35:91.90:439,92,0	1/1:28,1:29:44.73:315,45,0	1/1:34,0:34:66.24:377,66,0	1/1:41,0:41:57.68:406,58,0	1/1:27,0:27:72.59:346,73,0	1/1:13,0:13:30.76:152,31,0	0/1:15,0:15:14.71:98,0,15	1/1:33,1:34:94.15:448,94,0	1/1:25,0:25:66.16:300,66,0	1/1:24,0:24:63.81:297,64,0	1/1:31,0:31:77.24:350,77,0	1/1:21,0:21:52.61:244,53,0	1/1:25,0:25:63.05:280,63,0	1/1:38,1:39:95.40:401,95,0	1/1:36,0:36:40.19:362,40,0	1/1:14,0:14:17.48:154,17,0
chr10	55613427	.	C	CAT	14213.54	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-19.047;DP=687;FS=1.667;HRun=0;HaplotypeScore=72.4457;InbreedingCoeff=0.9994;MQ=83.20;MQ0=2;MQRankSum=-0.773;QD=45.70;ReadPosRankSum=1.692;VQSLOD=5.9639;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:81.26:0,81,1117	0/0:12,0:12:33.11:0,33,462	0/0:24,0:24:60.20:0,60,825	0/0:16,0:16:48.16:0,48,653	0/0:22,0:22:66.20:0,66,905	1/1:1,29:30:87.30:1566,87,0	1/1:1,14:15:39.13:702,39,0	0/0:42,0:42:99:0,114,1596	1/1:1,17:18:39.13:702,39,0	1/1:5,35:39:99:1750,102,0	1/1:3,19:22:51.17:918,51,0	0/0:33,0:33:87.29:0,87,1218	0/0:21,0:21:63.20:0,63,865	0/0:31,0:31:87.26:0,87,1197	1/1:3,24:28:69.24:1242,69,0	0/0:31,0:31:93.28:0,93,1266	0/0:18,0:18:46.95:0,47,618	0/0:27,0:27:75.22:0,75,1028	1/1:1,13:15:42.12:691,42,0	1/1:1,41:41:99:1944,108,0	1/1:2,9:11:24.08:432,24,0	0/0:37,0:37:99:0,102,1428	0/0:21,0:21:51.16:0,51,695	0/0:12,0:12:36.12:0,36,504	1/1:0,15:15:45.15:810,45,0	1/1:1,23:24:66.23:1189,66,0	1/1:2,39:41:99:1835,102,0	1/1:0,9:9:24.08:432,24,0
chr10	55614134	.	TA	T	4077.50	PASS	AB=0.767;AC=26;AF=0.464;AN=56;BaseQRankSum=10.174;DP=512;FS=19.468;HRun=12;HaplotypeScore=56.4206;InbreedingCoeff=0.8468;MQ=76.09;MQ0=0;MQRankSum=0.115;QD=16.12;ReadPosRankSum=2.554;VQSLOD=2.8653;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:69.08:0,69,678	0/1:3,1:4:11.21:11,0,79	0/0:17,0:16:21.42:0,21,194	0/0:13,0:13:8.24:0,8,61	0/0:23,1:24:39.89:0,40,586	1/1:3,16:19:35.85:279,36,0	1/1:1,13:14:29.88:232,30,0	0/0:20,0:23:53.89:0,54,514	1/1:2,8:10:17.93:139,18,0	1/1:3,17:20:50.77:390,51,0	1/1:6,16:23:46.80:349,47,0	0/0:23,0:23:48.05:0,48,464	0/0:18,1:19:24.83:0,25,421	0/0:8,0:8:24.05:0,24,244	1/1:3,17:20:47.64:371,48,0	0/0:25,0:25:63.11:0,63,629	0/0:20,2:22:13.66:0,14,502	0/0:12,0:12:36.07:0,36,365	1/1:5,9:14:26.88:209,27,0	1/1:4,17:21:50.80:394,51,0	1/1:2,22:24:53.78:418,54,0	0/0:14,0:14:36.06:0,36,360	0/0:18,0:18:35.90:0,36,344	0/0:16,0:16:45.09:0,45,457	1/1:3,16:20:13.43:277,13,0	1/1:4,13:17:38.82:299,39,0	1/1:3,32:36:71.38:671,71,0	0/1:7,4:11:13.33:37,0,13
chr10	55615113	.	CGG	C	5958.92	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=10.320;DP=460;FS=9.351;HRun=7;HaplotypeScore=57.0846;InbreedingCoeff=0.9598;MQ=78.28;MQ0=0;MQRankSum=-1.212;QD=26.96;ReadPosRankSum=2.302;VQSLOD=3.3268;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:60.19:0,60,1021	0/0:4,0:4:9.03:0,9,157	0/0:7,0:7:21.07:0,21,343	0/0:12,0:12:30.07:0,30,446	0/0:8,0:8:18.06:0,18,303	1/1:1,10:11:21.07:268,21,0	1/1:2,37:39:90.29:1145,90,0	0/0:11,0:11:24.04:0,24,338	1/1:1,12:13:30.10:382,30,0	1/1:2,9:11:27.08:343,27,0	1/1:1,5:6:12.04:153,12,0	0/0:25,0:25:73.17:0,73,973	0/0:11,0:11:30.04:0,30,464	0/0:19,0:19:48.12:0,48,731	1/1:0,6:6:18.06:229,18,0	0/0:12,0:12:30.08:0,30,471	0/0:33,0:33:99:0,99,1665	0/0:26,0:26:75.16:0,75,1170	1/1:2,9:11:26.75:315,27,0	1/1:5,1:6:6.02:74,6,0	1/1:13,68:80:99:2101,166,0	0/0:8,0:8:24.08:0,24,413	0/0:15,0:15:36.07:0,36,560	0/0:27,0:27:72.24:0,72,1225	1/1:1,9:10:21.07:267,21,0	1/1:5,9:14:30.09:377,30,0	1/1:2,7:9:12.02:153,12,0	1/1:0,4:4:12.04:153,12,0
chr10	55616017	.	TC	T	180.18	PASS	AC=16;AF=0.348;AN=46;BaseQRankSum=5.590;DP=398;FS=30.573;HRun=2;HaplotypeScore=51.4581;InbreedingCoeff=0.7643;MQ=99.83;MQ0=0;MQRankSum=-1.916;QD=13.86;ReadPosRankSum=-5.135;VQSLOD=0.0639;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,141,2245	0/0:12,0:12:36.12:0,36,573	0/0:22,0:22:66.22:0,66,1039	0/0:21,1:22:57.19:0,57,890	0/0:21,0:21:60.19:0,60,935	./.	1/1:2,0:2:6.02:70,6,0	0/0:46,0:46:99:0,126,1899	1/1:1,0:1:2.99:23,3,0	1/1:1,0:1:2.99:23,3,0	1/1:2,0:2:5.97:44,6,0	0/0:30,0:30:90.29:0,90,1404	0/0:23,0:23:66.21:0,66,1014	0/0:18,0:18:54.18:0,54,863	1/1:0,2:2:3.01:38,3,0	0/0:38,0:38:99:0,114,1786	0/0:23,0:23:69.24:0,69,1097	0/0:14,0:14:39.13:0,39,623	1/1:2,0:2:6.01:60,6,0	./.	./.	0/0:22,0:22:66.18:0,66,1020	0/0:28,0:28:84.23:0,84,1291	0/0:19,0:19:57.19:0,57,911	./.	./.	1/1:0,2:2:3.01:39,3,0	1/1:0,1:1:3.01:35,3,0
chr10	55616023	.	A	AGT	2897.83	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=16.494;DP=549;FS=2.085;HRun=0;HaplotypeScore=159.1803;InbreedingCoeff=0.9971;MQ=92.20;MQ0=0;MQRankSum=-14.758;QD=19.99;ReadPosRankSum=-2.925;VQSLOD=3.2428;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,138,2110	0/0:14,0:14:42.13:0,42,622	0/0:24,0:24:66.21:0,66,970	0/0:27,0:28:69.19:0,69,1026	0/0:21,0:21:63.21:0,63,963	1/1:9,0:9:23.49:146,23,0	1/1:8,2:10:29.60:264,30,0	0/0:40,0:40:99:0,114,1707	1/1:7,1:8:23.60:163,24,0	1/1:15,0:15:44.84:424,45,0	1/1:7,1:8:23.32:180,23,0	0/0:37,0:37:99:0,108,1608	0/0:23,0:23:66.19:0,66,968	0/0:20,0:20:60.19:0,60,897	1/1:17,0:17:46.87:290,47,0	0/0:38,0:38:99:0,111,1674	0/0:22,0:22:63.21:0,63,965	0/0:17,0:17:48.16:0,48,718	1/1:9,0:9:27:271,27,0	1/1:18,0:18:43.83:421,44,0	1/1:10,0:10:20.42:118,20,0	0/0:25,0:25:75.23:0,75,1106	0/0:27,0:27:81.27:0,81,1235	0/0:21,0:21:63.21:0,63,965	1/1:7,0:7:20.12:116,20,0	1/1:12,0:12:32.78:269,33,0	1/1:14,0:14:38.22:269,38,0	1/1:8,0:8:23.82:199,24,0
chr10	55617420	.	GCA	G	1547.93	PASS	AB=0.934;AC=38;AF=0.731;AN=52;BaseQRankSum=-3.059;DP=472;FS=29.207;HRun=0;HaplotypeScore=102.4198;InbreedingCoeff=-0.1279;MQ=60.99;MQ0=15;MQRankSum=0.675;QD=3.78;ReadPosRankSum=4.745;VQSLOD=0.4323;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:25,4:32:0.47:84,0,0	0/0:5,0:5:0.89:0,1,2	./.	./.	0/1:15,2:18:50.19:93,0,50	1/1:19,0:18:5.67:35,6,0	1/1:16,0:15:11.93:91,12,0	0/0:22,0:19:3:0,3,25	0/1:16,0:15:12.28:12,0,24	1/1:14,0:13:7.21:67,7,0	1/1:15,0:14:29.28:220,29,0	0/1:16,1:18:72.48:72,0,89	0/1:9,0:9:33.86:34,0,69	0/1:25,0:25:5.44:5,0,202	1/1:13,0:12:2.92:24,3,0	0/1:16,1:18:50.93:51,0,83	0/1:30,2:32:65.99:94,0,66	1/1:15,0:15:30.57:193,31,0	1/1:15,0:12:5.94:42,6,0	1/1:13,0:13:8.96:69,9,0	1/1:17,0:14:2.99:24,3,0	0/1:20,1:21:17.11:17,0,77	1/1:7,0:8:8.80:58,9,0	0/1:32,1:32:54.33:54,0,92	1/1:12,0:11:8.15:113,8,0	1/1:10,0:10:17.15:126,17,0	1/1:12,0:10:9.19:60,9,0	1/1:7,0:6:8:49,8,0
chr10	55617467	.	G	GAGAGAGAAAGAA	6235.45	PASS	AB=0.920;AC=18;AF=0.321;AN=56;BaseQRankSum=0.997;DP=483;FS=1.597;HRun=0;HaplotypeScore=204.1670;InbreedingCoeff=0.2698;MQ=45.33;MQ0=19;MQRankSum=-7.481;QD=30.42;ReadPosRankSum=-5.200;VQSLOD=3.2203;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:9.21:0,9,129	0/0:8,0:7:18.53:0,19,546	0/0:18,0:10:24.01:0,24,447	0/0:18,0:9:23.36:0,23,478	0/0:26,0:26:28.41:0,28,385	1/1:20,0:19:1.39:473,1,0	1/1:14,0:13:14.87:231,15,0	0/0:14,0:9:26.08:0,26,295	1/1:13,0:14:23.18:552,23,0	0/1:10,0:9:12.23:746,0,12	0/1:19,3:25:99:103,0,123	0/0:22,0:22:40.29:0,40,597	0/0:12,0:12:30.09:0,30,906	0/0:22,0:22:45.02:0,45,1500	1/1:17,0:18:36.90:875,37,0	0/0:14,0:14:21.19:0,21,330	0/0:20,0:19:26.46:0,26,417	0/0:15,0:15:29.75:0,30,294	0/1:16,0:13:64.35:188,0,64	0/1:11,0:11:57.29:192,0,57	1/1:6,0:5:2.94:18,3,0	0/0:23,0:22:18.04:0,18,326	0/0:18,0:17:20.72:0,21,251	0/0:21,0:20:32.13:0,32,531	0/1:11,1:13:23.73:247,0,24	0/1:21,0:21:99:1201,0,140	0/1:14,0:13:13.25:989,0,13	0/1:12,0:11:11.81:421,0,12
chr10	55617518	.	CT	C	1287.91	PASS	AB=0.713;AC=22;AF=0.393;AN=56;BaseQRankSum=-1.828;DP=477;FS=6.487;HRun=16;HaplotypeScore=96.5354;InbreedingCoeff=0.3371;MQ=68.86;MQ0=9;MQRankSum=2.035;QD=4.99;ReadPosRankSum=4.755;VQSLOD=2.2885;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:26:47.02:0,47,286	0/0:6,0:6:8.98:0,9,72	0/0:18,0:15:9.09:0,9,53	0/0:16,0:13:1.27:0,1,25	0/0:13,1:22:12.78:0,13,202	0/1:8,6:15:10.29:52,0,10	1/1:7,6:16:26.49:143,26,0	0/1:28,5:35:15.34:15,0,295	1/1:5,7:12:8.56:53,9,0	0/1:9,10:19:2.34:115,0,2	0/1:6,4:12:21.16:72,0,21	0/0:7,0:9:15.01:0,15,83	0/1:8,3:12:15.07:15,0,95	0/0:14,0:14:1.73:0,2,95	1/1:9,9:16:23.38:141,23,0	0/0:21,0:20:41.76:0,42,327	0/0:10,1:20:9.11:0,9,123	0/0:4,0:8:8.68:0,9,49	1/1:7,6:13:20.44:125,20,0	0/1:9,11:21:30.29:115,0,30	1/1:1,3:4:4.71:24,5,0	0/0:12,0:17:34.96:0,35,201	0/0:7,0:18:28.49:0,28,187	0/0:13,0:18:16.34:0,16,94	1/1:5,9:16:8.24:148,8,0	1/1:7,10:17:22.88:143,23,0	0/1:16,6:24:28.49:126,0,28	0/1:4,14:21:2.97:186,0,3
chr10	55618642	.	A	AC	9166.24	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=12.124;DP=704;FS=3.515;HRun=7;HaplotypeScore=112.2813;InbreedingCoeff=0.9929;MQ=75.51;MQ0=0;MQRankSum=-2.885;QD=28.73;ReadPosRankSum=2.782;VQSLOD=4.2463;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:85.10:0,85,835	0/0:10,0:10:27.04:0,27,261	0/0:39,0:38:96.08:0,96,901	0/0:28,0:28:66.05:0,66,623	0/0:28,0:28:75.03:0,75,708	1/1:3,29:32:78.24:940,78,0	1/1:3,14:17:10.20:406,10,0	0/0:37,0:37:90.10:0,90,853	1/1:2,21:23:57.17:689,57,0	1/1:6,16:22:48.15:579,48,0	1/1:2,26:28:66.19:781,66,0	0/0:28,0:28:72.10:0,72,695	0/0:18,0:18:51.05:0,51,480	0/0:24,0:24:72.12:0,72,695	1/1:4,34:38:90.28:1087,90,0	0/0:31,0:31:84.13:0,84,811	0/0:26,0:26:66.10:0,66,637	0/0:10,0:10:24.03:0,24,232	1/1:5,12:17:39.06:428,39,0	1/1:4,16:20:45.09:519,45,0	1/1:1,30:31:72.22:869,72,0	0/0:25,0:25:60.08:0,60,577	0/0:34,0:34:96.06:0,96,907	0/0:9,0:9:27.03:0,27,255	1/1:7,21:28:75.22:887,75,0	1/1:2,26:28:72.21:859,72,0	1/1:1,26:27:69.21:833,69,0	1/1:0,8:8:24.07:290,24,0
chr10	55619045	.	T	TG	15113.37	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=4.771;DP=508;FS=6.719;HRun=1;HaplotypeScore=238.6494;InbreedingCoeff=0.8780;MQ=50.94;MQ0=1;MQRankSum=-5.646;QD=30.59;ReadPosRankSum=4.362;VQSLOD=3.9309;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,25:29:66.11:766,66,0	1/1:0,2:2:6.02:64,6,0	0/0:6,0:6:14.75:0,15,134	0/0:7,0:8:12.96:0,13,191	1/1:1,22:23:47.98:567,48,0	1/1:3,20:23:60.18:745,60,0	1/1:3,7:10:21.06:235,21,0	1/1:10,19:28:81.26:1069,81,0	1/1:4,9:13:30.08:346,30,0	1/1:5,29:34:95.55:1198,96,0	1/1:2,16:18:48.09:568,48,0	1/1:3,26:29:75.16:861,75,0	1/1:5,17:22:58.67:573,59,0	1/1:1,22:23:60.15:665,60,0	1/1:2,13:15:42.10:460,42,0	1/1:8,37:45:99:1357,123,0	1/1:3,7:10:23.57:272,24,0	1/1:1,11:12:33.11:440,33,0	1/1:3,12:15:39.13:517,39,0	1/1:1,7:8:21.06:258,21,0	1/1:2,7:9:11.48:123,11,0	1/1:2,4:6:12.02:116,12,0	1/1:5,10:15:39.03:476,39,0	1/1:2,14:16:39.57:471,40,0	1/1:1,19:20:59.53:682,60,0	1/1:3,26:29:86.73:1038,87,0	1/1:2,32:33:93.20:1102,93,0	1/1:0,5:5:12.04:145,12,0
chr10	55619350	.	TG	T	5573.11	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=5.145;DP=436;FS=10.045;HRun=3;HaplotypeScore=50.8358;InbreedingCoeff=0.9740;MQ=59.44;MQ0=16;MQRankSum=0.180;QD=31.31;ReadPosRankSum=-0.594;VQSLOD=3.6468;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:33:90.30:0,90,1295	0/0:6,0:6:18.06:0,18,259	0/0:15,0:10:27.08:0,27,367	0/0:17,0:12:10.85:0,11,288	0/0:25,0:24:60.20:0,60,857	1/1:2,11:13:21.07:260,21,0	1/1:1,5:6:15.05:186,15,0	0/0:32,0:30:84.28:0,84,1205	1/1:0,9:9:27.08:334,27,0	1/1:3,13:14:39.08:466,39,0	1/1:0,8:8:18.06:223,18,0	0/0:18,0:18:42.13:0,42,586	0/0:10,0:9:26.98:0,27,362	0/0:9,0:9:24.04:0,24,322	1/1:0,10:10:27.08:335,27,0	0/0:24,0:24:69.19:0,69,970	0/0:27,0:26:72.16:0,72,989	0/0:11,0:11:29.68:0,30,431	1/1:0,20:20:57.16:683,57,0	1/1:0,12:12:30.09:372,30,0	1/1:2,11:11:30.09:372,30,0	0/0:3,0:2:6.02:0,6,86	0/0:13,0:11:30.10:0,30,431	0/0:12,0:11:27.09:0,27,388	1/1:0,18:18:48.15:595,48,0	1/1:2,19:20:54.17:669,54,0	1/1:0,18:18:48.15:595,48,0	1/1:0,14:14:39.12:483,39,0
chr10	55619525	.	T	TA	6588.19	PASS	AB=0.920;AC=31;AF=0.554;AN=56;BaseQRankSum=-11.469;DP=502;FS=6.813;HRun=9;HaplotypeScore=42.3359;InbreedingCoeff=0.8646;MQ=51.99;MQ0=56;MQRankSum=0.682;QD=21.96;ReadPosRankSum=-0.341;VQSLOD=5.1724;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:49:99:0,135,1161	1/1:1,3:3:9.02:100,9,0	0/0:11,0:6:17.87:0,18,144	0/0:6,0:2:6:0,6,52	0/0:19,0:16:41.97:0,42,360	1/1:3,17:18:19.07:439,19,0	1/1:3,10:12:30.08:332,30,0	1/1:12,28:33:58.16:862,58,0	1/1:1,11:12:30.08:332,30,0	1/1:3,18:19:51.10:546,51,0	1/1:4,15:18:42.07:451,42,0	0/0:21,0:18:44.97:0,45,387	0/0:9,0:9:23.99:0,24,208	0/0:15,0:13:26.97:0,27,230	1/1:4,9:11:1.02:239,1,0	0/0:15,0:13:23.99:0,24,208	0/0:36,0:32:85.54:0,86,733	0/1:21,2:22:3.37:3,0,432	1/1:5,14:18:19.04:428,19,0	1/1:5,25:25:66.06:690,66,0	1/1:3,6:6:12.03:133,12,0	0/0:4,0:3:6:0,6,52	0/0:9,0:7:17.98:0,18,153	0/0:4,0:4:9:0,9,78	1/1:2,9:11:29.91:313,30,0	1/1:2,15:15:45.12:498,45,0	1/1:3,25:26:66.18:730,66,0	1/1:6,14:17:45.12:494,45,0
chr10	55620049	.	TAA	T	5805.52	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=6.249;DP=633;FS=12.911;HRun=14;HaplotypeScore=83.5190;InbreedingCoeff=0.9872;MQ=68.68;MQ0=5;MQRankSum=-0.476;QD=19.29;ReadPosRankSum=4.952;VQSLOD=2.8204;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:36:92.61:0,93,1125	0/0:2,0:8:10.83:0,11,91	0/0:34,0:19:29.95:0,30,276	0/0:17,0:9:12.02:0,12,147	0/0:8,0:19:38.87:0,39,365	1/1:5,19:24:38.99:361,39,0	1/1:1,14:16:32.89:352,33,0	0/0:14,0:33:80.10:0,80,787	1/1:4,16:20:44.76:400,45,0	1/1:2,23:25:63.02:583,63,0	1/1:5,16:21:44.70:399,45,0	0/0:17,0:18:50.61:0,51,641	0/0:24,0:25:65.09:0,65,764	0/0:11,0:10:24.07:0,24,319	1/1:3,26:29:66:611,66,0	0/0:31,0:32:77.66:0,78,981	0/0:20,0:20:51.15:0,51,695	0/0:14,0:17:50.12:0,50,615	1/1:6,9:16:29.58:257,30,0	1/1:3,20:24:52.44:482,52,0	1/1:2,11:14:29.74:262,30,0	0/0:15,0:16:26.56:0,27,328	0/0:28,1:29:44.43:0,44,873	0/0:16,0:16:45.15:0,45,628	1/1:4,14:18:44.94:416,45,0	1/1:10,31:43:83.23:781,83,0	1/1:7,29:37:80.48:717,80,0	1/1:3,8:11:14.80:186,15,0
chr10	55620554	.	A	AAAAGAAAAAGAAAAAAG	18203.48	PASS	AB=1.000;AC=30;AF=0.536;AN=56;BaseQRankSum=2.151;DP=678;FS=0.767;HRun=0;HaplotypeScore=242.8953;InbreedingCoeff=0.7800;MQ=47.61;MQ0=21;MQRankSum=-12.348;QD=46.20;ReadPosRankSum=-2.286;VQSLOD=3.9275;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,142,3958	0/1:14,0:13:74.42:763,0,74	1/1:24,0:6:8.14:23,8,0	0/0:22,0:7:5.77:0,6,59	0/0:24,0:23:48.09:0,48,1596	1/1:5,9:17:8.98:718,9,0	1/1:20,0:18:42.02:1602,42,0	0/1:41,0:38:95.34:958,0,95	1/1:0,7:18:12.04:957,12,0	1/1:17,0:29:59.81:2292,60,0	1/1:27,0:27:74.65:2202,75,0	0/0:18,0:18:44.89:0,45,1033	0/0:14,0:14:36.02:0,36,594	0/0:13,0:12:30:0,30,613	1/1:5,16:39:12:951,12,0	0/0:29,0:28:76.25:0,76,1648	0/0:32,0:31:75.16:0,75,2049	0/0:18,0:16:47.98:0,48,1052	1/1:4,7:26:65.75:2279,66,0	1/1:6,15:39:20.88:1079,21,0	1/1:7,0:6:14.86:524,15,0	0/0:16,0:16:42.08:0,42,1398	0/0:16,0:15:31.69:0,32,627	0/0:28,0:28:62.93:0,63,2176	1/1:3,5:22:5.98:478,6,0	1/1:3,14:33:69.92:2603,70,0	1/1:3,8:27:4.78:288,5,0	1/1:8,0:7:21:487,21,0
chr10	55620571	.	G	GA	222.38	PASS	AB=0.868;AC=4;AF=0.071;AN=56;BaseQRankSum=6.200;DP=593;FS=12.933;HRun=7;HaplotypeScore=91.7981;InbreedingCoeff=-0.0810;MQ=57.34;MQ0=5;MQRankSum=-5.188;QD=2.97;ReadPosRankSum=2.651;VQSLOD=-0.4322;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,132,1256	0/0:14,0:13:29.60:0,30,224	0/0:26,0:12:24.43:0,24,206	0/0:23,0:11:9.92:0,10,116	0/0:26,0:26:75.09:0,75,712	0/0:9,0:8:13.12:0,13,81	0/1:17,3:20:54.17:54,0,324	0/0:44,0:42:84.50:0,85,715	0/0:15,0:15:18.62:0,19,119	0/1:18,4:22:64.02:64,0,341	0/1:19,9:28:99:199,0,365	0/0:18,0:18:44.74:0,45,415	0/0:11,0:11:30.02:0,30,281	0/0:13,0:12:24.02:0,24,231	0/0:22,0:22:22.11:0,22,157	0/0:24,0:23:44.45:0,44,498	0/0:35,0:35:87.09:0,87,827	0/0:17,0:17:45.07:0,45,432	0/0:24,0:24:64.24:0,64,592	0/0:22,0:21:28.12:0,28,226	0/1:5,0:5:12.89:13,0,75	0/0:15,0:15:42.06:0,42,403	0/0:11,0:11:32.73:0,33,300	0/0:26,0:26:75.08:0,75,711	0/0:17,0:17:13.75:0,14,102	0/0:26,0:25:55.29:0,55,485	0/0:18,0:18:14.86:0,15,124	0/0:8,0:8:24.04:0,24,232
chr10	55620773	.	A	ATTTT	9589.14	PASS	AB=1.000;AC=31;AF=0.554;AN=56;BaseQRankSum=9.328;DP=476;FS=11.614;HRun=10;HaplotypeScore=86.0192;InbreedingCoeff=0.9230;MQ=72.08;MQ0=0;MQRankSum=-7.907;QD=34.62;ReadPosRankSum=-6.084;VQSLOD=0.9344;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:78.25:0,78,1104	1/1:0,0:6:18.06:223,18,0	0/1:13,0:13:8.90:9,0,86	0/0:7,0:7:8.83:0,9,124	0/0:15,0:15:39.09:0,39,551	1/1:3,5:17:27.09:542,27,0	1/1:8,6:14:18.06:376,18,0	1/1:13,1:32:60.16:749,60,0	1/1:6,7:14:24.08:494,24,0	1/1:3,13:21:51.06:896,51,0	1/1:9,6:20:36.89:639,37,0	0/0:18,0:18:40.03:0,40,591	0/0:21,0:21:51.14:0,51,717	0/0:9,0:9:24.05:0,24,340	1/1:4,21:26:45.15:1010,45,0	0/0:18,0:19:54.11:0,54,725	0/0:32,0:33:93.23:0,93,1277	0/0:11,0:12:28.33:0,28,381	1/1:7,7:15:30.02:602,30,0	1/1:2,8:12:35.33:659,35,0	1/1:6,10:17:24.04:418,24,0	0/0:7,0:7:21.07:0,21,297	0/0:17,0:17:48.15:0,48,679	0/0:14,0:14:33.08:0,33,467	1/1:3,15:21:42.14:906,42,0	1/1:6,9:18:36.10:722,36,0	1/1:5,14:23:39.13:851,39,0	1/1:3,5:8:21.07:493,21,0
chr10	55621015	.	GA	G	11864.55	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=18.113;DP=646;FS=0.591;HRun=1;HaplotypeScore=88.5004;InbreedingCoeff=0.9978;MQ=92.78;MQ0=0;MQRankSum=-2.647;QD=39.68;ReadPosRankSum=3.321;VQSLOD=5.3801;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,105,1678	0/0:6,0:6:18.06:0,18,288	0/0:23,0:23:69.20:0,69,1051	0/0:32,0:32:93.31:0,93,1411	0/0:17,0:17:51.17:0,51,813	1/1:0,20:20:54.18:755,54,0	1/1:0,22:22:54.18:755,54,0	0/0:25,0:25:75.26:0,75,1197	1/1:0,25:25:69.19:965,69,0	1/1:0,21:21:63.20:858,63,0	1/1:0,7:7:18.06:252,18,0	0/0:38,0:38:99:0,114,1823	0/0:28,0:28:84.29:0,84,1337	0/0:12,0:12:36.11:0,36,546	1/1:0,26:26:78.26:1091,78,0	0/0:30,0:30:90.31:0,90,1436	0/0:15,0:15:45.15:0,45,715	0/0:19,0:19:54.18:0,54,863	1/1:0,21:21:63.20:866,63,0	1/1:0,17:17:51.17:713,51,0	1/1:0,48:48:99:1888,135,0	0/0:26,0:26:78.23:0,78,1176	0/0:15,0:15:42.14:0,42,671	0/0:25,0:25:75.26:0,75,1199	1/1:0,23:23:66.22:923,66,0	1/1:0,19:19:57.19:795,57,0	1/1:1,28:29:84.28:1164,84,0	1/1:0,21:21:60.20:839,60,0
chr10	55621850	.	T	TA	6701.92	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-13.817;DP=494;FS=5.505;HRun=8;HaplotypeScore=43.5192;InbreedingCoeff=0.9347;MQ=64.26;MQ0=0;MQRankSum=2.255;QD=28.28;ReadPosRankSum=0.165;VQSLOD=5.1175;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:58.80:0,59,691	0/0:9,0:9:24:0,24,215	0/0:11,0:10:15.07:0,15,172	0/0:3,0:2:6:0,6,53	0/0:31,1:34:54.41:0,54,731	1/1:1,10:11:27.08:312,27,0	1/1:1,4:5:9.03:104,9,0	0/0:36,0:36:83.98:0,84,758	1/1:0,13:13:36.11:415,36,0	1/1:6,20:26:11.21:598,11,0	1/1:3,25:28:72.04:783,72,0	0/0:13,0:13:26.99:0,27,242	0/0:16,0:16:39.01:0,39,357	0/0:14,0:14:39.02:0,39,357	1/1:3,10:13:27.08:312,27,0	0/0:16,1:17:1.39:0,1,267	0/0:23,0:23:66:0,66,594	0/0:24,0:24:56.39:0,56,502	1/1:3,19:22:57.15:647,57,0	1/1:5,26:31:78.23:898,78,0	1/1:0,16:16:45.13:519,45,0	0/0:6,0:6:15:0,15,137	0/0:9,0:9:27.01:0,27,247	0/0:9,0:9:24.01:0,24,220	1/1:2,24:26:69.21:796,69,0	1/1:3,19:22:33.21:631,33,0	1/1:1,16:18:47.87:515,48,0	1/1:1,5:6:15.04:173,15,0
chr10	55623870	.	ATT	A	5918.98	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=6.181;DP=593;FS=1.484;HRun=14;HaplotypeScore=77.7505;InbreedingCoeff=0.9784;MQ=62.79;MQ0=3;MQRankSum=0.497;QD=20.92;ReadPosRankSum=5.140;VQSLOD=4.6162;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:26:66.98:0,67,810	0/0:5,0:20:38.17:0,38,179	0/0:17,0:9:11.02:0,11,102	0/0:14,0:12:14.12:0,14,127	0/0:31,0:31:78.24:0,78,1062	1/1:1,22:23:60.06:555,60,0	1/1:3,15:19:41.98:389,42,0	0/0:12,0:35:56.94:0,57,230	1/1:4,15:20:32.82:352,33,0	1/1:5,19:24:57.01:527,57,0	1/1:3,24:27:62.97:582,63,0	0/0:22,0:24:53.59:0,54,683	0/0:19,0:19:47.37:0,47,638	0/0:14,0:15:41.58:0,42,503	1/1:4,20:23:57:527,57,0	0/0:19,0:20:54.15:0,54,709	0/0:21,0:24:64.61:0,65,785	0/0:14,0:14:39.12:0,39,530	1/1:4,14:20:47.41:404,47,0	1/1:4,17:22:37.79:397,38,0	1/1:3,13:17:32.89:352,33,0	0/0:13,0:14:41.63:0,42,553	0/0:20,0:22:53.62:0,54,654	0/0:14,0:14:30.10:0,30,418	1/1:3,11:14:6.39:226,6,0	1/1:6,21:28:62.69:566,63,0	1/1:2,24:28:71.53:634,72,0	1/1:1,15:17:38.89:408,39,0
chr10	55624807	.	GC	G	1444.81	PASS	AB=0.723;AC=40;AF=0.741;AN=54;BaseQRankSum=0.595;DP=177;FS=32.598;HRun=11;HaplotypeScore=24.8290;InbreedingCoeff=0.2663;MQ=72.89;MQ0=0;MQRankSum=-0.545;QD=9.32;ReadPosRankSum=3.007;VQSLOD=0.0555;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,6:14:14.72:121,15,0	1/1:2,0:6:8.14:24,8,0	0/0:3,0:3:0.17:0,0,3	0/0:8,0:5:3:0,3,29	1/1:3,2:5:6.45:50,6,0	1/1:1,2:3:5.99:49,6,0	0/1:11,5:13:45.13:103,0,45	1/1:4,0:7:5.82:17,6,0	1/1:0,1:1:3:25,3,0	1/1:1,2:5:7.06:36,7,0	1/1:2,0:2:2.92:17,3,0	0/1:7,7:15:3.99:127,0,4	0/0:3,0:3:5.99:0,6,49	0/1:6,1:7:15.60:16,0,41	0/0:3,0:3:6.02:0,6,64	1/1:4,4:8:17.92:143,18,0	0/1:6,9:15:4.88:165,0,5	1/1:2,6:9:20:154,20,0	1/1:2,0:2:2.98:23,3,0	1/1:2,1:2:2.99:25,3,0	1/1:3,6:10:17:129,17,0	1/1:1,4:5:5.99:49,6,0	./.	1/1:8,3:12:19.88:139,20,0	0/0:2,0:3:6.02:0,6,64	1/1:0,5:6:17.02:129,17,0	1/1:1,1:2:3:25,3,0	1/1:0,1:1:2.99:24,3,0
chr10	55624833	.	TC	T	141.98	PASS	AB=1.000;AC=5;AF=0.119;AN=42;BaseQRankSum=1.115;DP=172;FS=0.000;HRun=7;HaplotypeScore=35.2253;InbreedingCoeff=0.5230;MQ=95.25;MQ0=0;MQRankSum=-0.294;QD=7.10;ReadPosRankSum=2.129;VQSLOD=-0.6073;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:51.13:0,51,614	1/1:2,4:6:12.02:122,12,0	0/1:9,0:8:5.01:5,0,61	0/0:12,0:9:21.03:0,21,219	0/0:10,0:10:27.06:0,27,314	0/0:2,0:2:3.46:0,3,24	0/0:12,0:9:0:0,0,0	1/1:1,4:5:12.02:122,12,0	0/0:3,0:3:3.44:0,3,21	0/0:3,0:3:0.47:0,0,1	./.	0/0:11,0:11:27.08:0,27,327	0/0:4,0:4:9.03:0,9,113	0/0:3,0:3:9.03:0,9,113	./.	0/0:8,0:8:20.64:0,21,225	0/0:19,0:19:51.14:0,51,614	0/0:11,0:11:31.32:0,31,354	./.	./.	./.	0/0:7,0:7:15.01:0,15,172	0/0:3,0:3:9.03:0,9,107	0/0:11,0:11:24.01:0,24,258	./.	0/0:5,0:5:5.19:0,5,27	0/0:1,0:1:2.98:0,3,21	./.
chr10	55629093	.	C	CAAAT	24999.91	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-13.795;DP=698;FS=0.604;HRun=0;HaplotypeScore=92.6871;InbreedingCoeff=0.9980;MQ=74.81;MQ0=1;MQRankSum=-7.293;QD=60.83;ReadPosRankSum=-1.589;VQSLOD=6.2123;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:54.16:0,54,997	1/1:1,8:9:24.08:642,24,0	0/0:19,0:19:48.11:0,48,791	0/0:11,0:11:23:0,23,412	0/0:31,0:31:84.29:0,84,1616	1/1:1,36:38:96.33:2473,96,0	1/1:2,16:19:42.14:1090,42,0	1/1:11,31:44:99:2822,114,0	1/1:1,25:28:60.21:1623,60,0	1/1:4,32:37:99:2525,102,0	1/1:3,21:25:60.03:1324,60,0	0/0:28,0:28:81.23:0,81,1441	0/0:34,0:34:99:0,99,1808	0/0:17,0:17:51.10:0,51,870	1/1:1,40:41:90.31:2431,90,0	0/0:30,0:30:87.30:0,87,1685	0/0:13,0:13:39.06:0,39,649	0/0:26,0:26:78.23:0,78,1442	1/1:4,15:21:60.17:1327,60,0	1/1:4,24:28:75.26:1784,75,0	1/1:5,18:23:54.10:1305,54,0	0/0:21,0:21:63.22:0,63,1207	0/0:31,0:31:87.28:0,87,1623	0/0:8,0:8:24.08:0,24,464	1/1:0,21:21:39.13:1056,39,0	1/1:4,30:36:99:2656,105,0	1/1:3,24:28:60.21:1516,60,0	1/1:3,4:9:18.06:426,18,0
chr10	55629852	.	T	TA	428	PASS	AB=0.971;AC=15;AF=0.268;AN=56;BaseQRankSum=1.136;DP=508;FS=2.546;HRun=13;HaplotypeScore=94.7424;InbreedingCoeff=-0.0338;MQ=61.91;MQ0=2;MQRankSum=-2.177;QD=1.83;ReadPosRankSum=-2.083;VQSLOD=-0.2998;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,1:30:17.18:0,17,246	1/1:13,0:13:14.01:89,14,0	0/0:23,0:15:16.24:0,16,111	0/0:21,0:15:10.26:0,10,65	0/1:19,0:19:8.28:8,0,187	0/0:11,0:11:16.80:0,17,82	0/1:16,0:16:42.69:43,0,52	1/1:21,0:20:7.32:132,7,0	0/1:17,0:17:7.51:8,0,51	0/1:20,1:21:52.91:53,0,81	0/1:11,0:11:0.56:1,0,31	0/1:21,1:23:16.73:17,0,236	0/0:7,0:7:14.83:0,15,103	0/0:19,1:20:9.80:0,10,193	0/1:18,0:18:18.26:18,0,74	0/0:23,0:23:47.17:0,47,310	0/0:26,0:28:54.34:0,54,355	0/0:28,2:30:19.46:0,19,267	0/0:17,0:17:15.50:0,15,79	0/1:12,0:12:6.33:6,0,56	0/0:6,0:6:8.05:0,8,42	0/0:12,1:14:6.75:0,7,175	0/0:12,0:12:23.69:0,24,159	0/0:17,0:17:32.67:0,33,226	0/1:14,1:16:37.60:38,0,67	0/1:21,1:22:46.02:81,0,46	0/1:23,2:25:90.19:90,0,99	0/0:10,0:10:0.49:0,0,31
chr10	55629865	.	AG	A	2933.63	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=1.945;DP=512;FS=0.382;HRun=1;HaplotypeScore=77.4969;InbreedingCoeff=0.9626;MQ=68.33;MQ0=3;MQRankSum=-3.984;QD=12.12;ReadPosRankSum=-5.252;VQSLOD=-0.0073;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,1:26:34.91:0,35,619	1/1:5,4:9:18.89:173,19,0	0/0:28,0:18:34.68:0,35,314	0/0:29,0:15:25.24:0,25,225	0/0:23,0:23:68.94:0,69,675	1/1:10,0:10:13.99:90,14,0	1/1:15,0:15:18.93:147,19,0	1/1:12,8:19:51.07:461,51,0	1/1:17,1:18:25.54:185,26,0	1/1:22,0:22:20.53:231,21,0	1/1:14,1:15:20.13:250,20,0	0/0:24,0:24:39.46:0,39,591	0/0:9,0:9:23.38:0,23,240	0/0:17,0:17:29.32:0,29,425	1/1:15,1:16:18.71:128,19,0	0/0:19,0:19:56.19:0,56,588	0/0:26,0:26:67.84:0,68,778	0/0:25,0:26:67.91:0,68,651	1/1:17,1:18:28.27:220,28,0	1/1:15,0:15:5.44:140,5,0	1/1:7,0:7:7.04:54,7,0	0/0:16,0:16:40.91:0,41,445	0/0:13,0:13:36.04:0,36,386	0/0:14,0:14:41.92:0,42,439	1/1:20,1:21:39.35:275,39,0	1/1:19,0:19:40.65:273,41,0	1/1:26,1:27:44.44:362,44,0	1/1:8,2:10:15.97:174,16,0
chr10	55629875	.	AG	A	677.60	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=4.608;DP=504;FS=39.867;HRun=1;HaplotypeScore=83.8787;InbreedingCoeff=0.9865;MQ=68.36;MQ0=3;MQRankSum=-1.354;QD=23.37;ReadPosRankSum=-2.400;VQSLOD=0.9879;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:72.24:0,72,1089	1/1:4,2:6:15:153,15,0	0/0:30,0:19:48.80:0,49,658	0/0:29,1:16:21.91:0,22,365	0/0:24,0:24:69.23:0,69,1078	0/0:11,0:11:32.31:0,32,370	0/0:13,0:13:29.72:0,30,377	1/1:8,15:23:54.91:643,55,0	0/0:18,0:18:49:0,49,615	0/0:21,0:21:59.36:0,59,706	0/0:16,0:16:47.16:0,47,524	0/0:20,0:20:57.19:0,57,892	0/0:10,0:10:27.09:0,27,406	0/0:15,0:15:40.02:0,40,625	0/0:17,0:17:44.68:0,45,575	0/0:17,0:17:51.17:0,51,803	0/0:26,0:26:72.24:0,72,1129	0/0:23,1:24:66.10:0,66,971	0/0:18,0:18:49.69:0,50,501	0/0:15,0:15:38.31:0,38,431	0/0:8,0:8:20.65:0,21,239	0/0:15,0:15:45.15:0,45,696	0/0:13,0:13:36.12:0,36,570	0/0:14,0:14:42.14:0,42,648	0/0:20,0:20:59.35:0,59,679	0/0:18,0:18:53.12:0,53,634	0/0:24,0:24:71.08:0,71,815	0/0:13,0:13:38.72:0,39,441
chr10	55629877	.	A	AC	904.44	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=3.491;DP=507;FS=36.696;HRun=2;HaplotypeScore=83.4037;InbreedingCoeff=0.9685;MQ=68.26;MQ0=3;MQRankSum=-0.733;QD=29.18;ReadPosRankSum=-2.776;VQSLOD=0.8184;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:69.20:0,69,838	1/1:2,4:6:14.76:204,15,0	0/0:30,0:19:47.76:0,48,516	0/0:30,0:16:11.05:0,11,292	0/0:24,0:24:69.22:0,69,851	0/0:10,0:10:30.08:0,30,346	0/0:14,0:14:30.09:0,30,355	1/1:20,5:25:63.20:819,63,0	0/0:20,0:20:54.10:0,54,611	0/0:21,0:21:57.15:0,57,663	0/0:17,0:17:51.13:0,51,582	0/0:19,0:19:57.18:0,57,705	0/0:11,0:11:27.08:0,27,333	0/0:15,0:15:42.06:0,42,499	0/0:18,0:18:48.13:0,48,558	0/0:17,0:17:51.16:0,51,632	0/0:26,0:26:72.23:0,72,891	0/0:23,0:23:63.18:0,63,759	0/0:17,0:17:45.11:0,45,496	0/0:15,0:15:39.11:0,39,447	0/0:8,0:8:21.05:0,21,236	0/0:15,0:15:45.14:0,45,556	0/0:12,0:12:30.09:0,30,368	0/0:14,0:14:42.13:0,42,518	0/0:20,0:20:59.99:0,60,681	0/0:19,0:19:57.15:0,57,659	0/0:24,0:24:69.18:0,69,791	0/0:12,0:12:36.11:0,36,432
chr10	55630246	.	GCACACACA	G	3597.50	PASS	AB=0.775;AC=25;AF=0.500;AN=50;BaseQRankSum=0.773;DP=640;FS=2.741;HRun=0;HaplotypeScore=175.8290;InbreedingCoeff=0.6167;MQ=59.85;MQ0=9;MQRankSum=-6.465;QD=11.53;ReadPosRankSum=-1.089;VQSLOD=2.4193;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:37:26.35:0,26,277	0/1:6,1:9:36.39:125,0,36	./.	./.	0/0:14,0:26:11.97:0,12,96	1/1:20,0:18:15.46:170,15,0	1/1:26,5:31:5.37:148,5,0	0/0:14,0:14:8.91:0,9,61	1/1:13,14:26:15.05:372,15,0	1/1:13,7:19:27.06:452,27,0	1/1:18,4:26:24.54:493,25,0	0/0:21,0:29:0.19:0,0,173	0/0:19,0:21:30.09:0,30,857	0/0:19,0:19:36.11:0,36,1124	1/1:13,9:26:30:640,30,0	0/0:25,0:28:22.13:0,22,782	0/1:23,0:29:60.94:61,0,266	0/0:12,0:14:16.55:0,17,186	1/1:13,1:15:6.02:130,6,0	./.	1/1:30,0:28:9.46:80,9,0	0/0:13,0:15:6.46:0,6,135	0/0:9,0:16:6.98:0,7,132	0/0:23,0:34:29.89:0,30,272	1/1:10,11:21:15.01:317,15,0	0/1:18,8:26:12.96:123,0,13	1/1:10,8:18:11.94:264,12,0	1/1:5,8:13:9.03:223,9,0
chr10	55630844	.	CAAA	C	3875.42	PASS	AB=0.722;AC=25;AF=0.446;AN=56;BaseQRankSum=2.255;DP=529;FS=15.342;HRun=15;HaplotypeScore=133.4644;InbreedingCoeff=0.8943;MQ=59.04;MQ0=1;MQRankSum=-1.831;QD=18.63;ReadPosRankSum=4.941;VQSLOD=0.9345;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:79.25:0,79,1013	0/0:10,0:11:27.07:0,27,436	0/0:24,0:18:25.28:0,25,221	0/0:13,0:10:15.02:0,15,195	0/0:24,0:24:60.16:0,60,978	1/1:5,10:15:32.63:346,33,0	1/1:4,8:14:32.96:350,33,0	0/0:24,0:26:66.09:0,66,924	1/1:9,5:14:29.72:294,30,0	1/1:14,8:24:26.67:330,27,0	1/1:4,5:11:17.91:215,18,0	0/0:18,0:20:54.01:0,54,647	0/0:16,0:15:39.04:0,39,533	0/0:18,0:19:45.05:0,45,545	1/1:10,5:15:6.42:201,6,0	0/0:15,0:26:54.56:0,55,432	0/0:10,0:21:56.17:0,56,408	0/0:23,0:24:63.02:0,63,847	1/1:7,5:17:16.02:179,16,0	1/1:6,11:19:20.30:381,20,0	0/1:8,5:13:17.67:119,0,18	0/0:18,0:20:36.91:0,37,512	0/0:18,0:18:42.09:0,42,664	0/0:19,0:19:38.86:0,39,594	1/1:6,12:20:15.12:412,15,0	1/1:11,11:24:49.93:521,50,0	1/1:4,9:15:7.13:291,7,0	1/1:0,7:7:21.06:235,21,0
chr10	55631563	.	A	AAATAAATG	4264.16	PASS	AB=1.000;AC=25;AF=0.543;AN=46;BaseQRankSum=4.193;DP=235;FS=3.992;HRun=0;HaplotypeScore=90.8546;InbreedingCoeff=0.6002;MQ=38.69;MQ0=6;MQRankSum=-4.350;QD=26.99;ReadPosRankSum=3.403;VQSLOD=4.3501;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:6:9.01:0,9,137	1/1:2,0:2:6.02:89,6,0	./.	./.	0/0:7,0:6:12:0,12,173	1/1:21,0:20:25.88:633,26,0	0/0:3,0:3:5.89:0,6,37	0/0:34,0:31:37.18:0,37,313	1/1:4,0:4:6.01:63,6,0	1/1:3,1:3:6.02:183,6,0	1/1:5,1:6:15.04:274,15,0	0/0:7,0:6:9.02:0,9,112	0/0:1,0:1:3:0,3,27	0/0:3,0:3:9.02:0,9,192	1/1:5,0:5:12.01:123,12,0	0/0:5,0:5:9.02:0,9,112	0/1:21,0:18:99:221,0,203	0/1:13,0:12:99:118,0,150	1/1:23,0:23:47.41:653,47,0	1/1:5,1:6:15.03:354,15,0	./.	./.	./.	0/0:4,0:4:8.97:0,9,96	1/1:14,3:17:14.05:835,14,0	0/1:8,0:8:0.94:314,0,1	1/1:11,0:10:18.46:266,18,0	1/1:17,0:10:13.28:139,13,0
chr10	55631584	.	G	GATAAATAA	1248.12	PASS	AB=1.000;AC=26;AF=0.619;AN=42;BaseQRankSum=2.582;DP=217;FS=0.000;HRun=0;HaplotypeScore=87.1375;InbreedingCoeff=0.1161;MQ=41.10;MQ0=0;MQRankSum=-5.047;QD=6.75;ReadPosRankSum=6.182;VQSLOD=0.9917;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	1/1:2,0:2:5.95:71,6,0	0/0:2,0:1:0:0,0,0	./.	1/1:5,1:6:3.01:53,3,0	1/1:15,0:15:11.80:75,12,0	0/0:6,0:6:5.53:0,6,50	0/1:42,0:37:3.97:4,0,76	0/0:3,0:3:0.89:0,1,2	0/1:3,0:3:22.98:74,0,23	0/1:7,0:6:18.98:80,0,19	./.	0/0:3,0:3:9.02:0,9,130	0/0:5,0:5:15.02:0,15,253	1/1:2,0:2:2.92:17,3,0	1/1:2,0:2:2.98:21,3,0	1/1:8,12:21:6.02:247,6,0	1/1:5,3:9:6.49:248,6,0	0/1:15,0:15:11.83:30,0,12	1/1:4,0:4:5.95:101,6,0	./.	./.	./.	./.	1/1:17,0:17:18.31:306,18,0	0/1:10,0:10:25.52:26,0,36	0/1:13,0:12:10.53:11,0,40	1/1:15,0:13:1.88:17,2,0
chr10	55631588	.	A	ATAGATAG	1719.69	PASS	AB=0.947;AC=23;AF=0.479;AN=48;BaseQRankSum=0.922;DP=222;FS=6.185;HRun=0;HaplotypeScore=85.4946;InbreedingCoeff=0.0810;MQ=46.02;MQ0=0;MQRankSum=0.077;QD=9.00;ReadPosRankSum=0.689;VQSLOD=0.9101;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:3,0:2:6.02:0,6,149	1/1:2,0:2:6:84,6,0	0/0:2,0:1:0.47:0,0,1	0/0:3,0:1:0:0,0,0	0/0:6,0:6:12.02:0,12,169	0/1:16,0:16:7.32:123,0,7	0/1:7,0:7:11.87:53,0,12	0/1:41,0:36:99:208,0,978	1/1:4,0:4:2:23,2,0	1/1:2,1:3:4.05:119,4,0	0/1:6,1:6:0.71:105,0,1	0/0:3,0:2:3.01:0,3,74	0/0:3,0:3:9.03:0,9,213	0/0:5,0:5:15.04:0,15,328	1/1:2,0:2:2.99:23,3,0	0/0:3,0:3:6.01:0,6,82	0/1:25,0:23:59.72:60,0,140	0/1:8,0:8:64.79:65,0,144	0/1:16,0:16:1.52:149,0,2	0/1:3,1:4:0.75:107,0,1	./.	./.	./.	./.	0/1:14,3:17:13.08:360,0,13	1/1:12,0:12:2.81:189,3,0	1/1:12,0:12:3.60:99,4,0	1/1:15,0:14:8.60:91,9,0
chr10	55631982	.	CTGTGTGTGTGTG	C	3673.96	PASS	AB=0.981;AC=21;AF=0.404;AN=52;BaseQRankSum=6.970;DP=568;FS=4.794;HRun=0;HaplotypeScore=182.2966;InbreedingCoeff=0.6266;MQ=62.27;MQ0=23;MQRankSum=-5.751;QD=15.63;ReadPosRankSum=-1.326;VQSLOD=2.4113;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:26:29.82:0,30,1358	0/0:6,0:8:12.01:0,12,134	./.	0/0:29,0:13:8.99:0,9,88	0/0:20,0:21:36.09:0,36,1165	1/1:3,13:15:14.77:429,15,0	./.	0/1:30,0:30:2.22:2,0,101	1/1:7,6:14:1.59:263,2,0	1/1:10,13:23:30.16:732,30,0	0/0:5,5:11:2.68:0,3,23	0/0:14,0:15:18.53:0,19,692	0/0:20,0:23:36.10:0,36,1307	0/0:20,0:21:30.09:0,30,1107	1/1:6,17:23:3.04:569,3,0	0/0:26,0:26:45.13:0,45,1694	0/0:15,0:18:36.55:0,37,1336	0/0:18,0:18:42.08:0,42,1618	0/1:16,1:16:21.71:179,0,22	1/1:4,9:12:8.96:254,9,0	0/1:23,0:23:15.06:63,0,15	0/0:11,0:11:27.08:0,27,1020	0/0:13,0:14:27.08:0,27,1283	0/0:39,0:40:60.13:0,60,2307	1/1:6,8:15:9.03:272,9,0	1/1:9,10:19:9.13:243,9,0	1/1:14,12:26:23.87:646,24,0	1/1:5,9:16:2.98:22,3,0
chr10	55635566	.	T	TAA	5310.97	PASS	AB=1.000;AC=27;AF=0.482;AN=56;BaseQRankSum=-6.347;DP=488;FS=7.209;HRun=12;HaplotypeScore=63.2694;InbreedingCoeff=0.8734;MQ=62.17;MQ0=2;MQRankSum=3.302;QD=22.89;ReadPosRankSum=-3.338;VQSLOD=3.2970;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:71.97:0,72,666	0/0:8,0:8:21.01:0,21,194	0/0:18,0:9:6.10:0,6,65	0/1:11,0:7:42.55:43,0,65	0/0:13,0:17:41.49:0,41,352	1/1:2,14:19:45.37:567,45,0	1/1:2,9:11:27.04:356,27,0	0/0:29,0:29:53.67:0,54,583	1/1:3,10:14:26.57:339,27,0	1/1:4,18:24:48.04:564,48,0	1/1:5,9:14:2.33:351,2,0	0/0:20,0:20:44.91:0,45,408	0/0:12,0:12:30.01:0,30,278	0/0:6,0:6:15:0,15,139	1/1:5,13:19:30.10:421,30,0	0/0:10,0:10:27.01:0,27,244	0/0:26,0:26:68.99:0,69,631	0/0:31,0:31:68.95:0,69,633	1/1:7,12:19:13.70:440,14,0	1/1:1,7:8:21.03:273,21,0	1/1:4,7:11:15.03:193,15,0	0/0:7,0:7:14.99:0,15,139	0/0:16,0:17:28.03:0,28,365	0/0:16,0:18:44.48:0,44,384	1/1:7,17:26:44.49:562,44,0	1/1:7,17:27:47.88:576,48,0	1/1:3,6:11:13.34:127,13,0	1/1:1,14:17:40.96:502,41,0
chr10	55636455	.	AAC	A	3807.12	PASS	AB=0.886;AC=31;AF=0.554;AN=56;BaseQRankSum=8.470;DP=598;FS=0.929;HRun=0;HaplotypeScore=85.4281;InbreedingCoeff=0.6214;MQ=64.67;MQ0=7;MQRankSum=2.035;QD=10.55;ReadPosRankSum=3.895;VQSLOD=3.3977;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,5:45:10.89:0,11,561	0/1:9,0:9:5.57:6,0,21	0/0:26,0:21:13.82:0,14,163	0/0:30,0:20:9.03:0,9,123	0/0:17,0:17:22.59:0,23,277	1/1:13,9:24:35.55:345,36,0	1/1:11,6:18:26.91:285,27,0	0/0:17,0:17:22.27:0,22,250	1/1:12,10:24:47.61:472,48,0	1/1:13,5:17:15.04:170,15,0	1/1:10,7:17:11.82:135,12,0	0/1:22,2:24:32.66:33,0,422	0/0:15,0:13:21.07:0,21,321	0/0:21,0:21:42.14:0,42,624	1/1:9,10:18:33.09:373,33,0	0/0:17,0:18:18.96:0,19,440	0/0:31,2:33:11.24:0,11,609	0/1:17,3:20:27.13:27,0,424	1/1:13,1:14:11.66:82,12,0	1/1:14,2:15:17.88:183,18,0	1/1:11,19:31:41.37:411,41,0	0/0:15,0:15:21.05:0,21,295	0/1:14,2:18:45.43:45,0,206	0/1:35,6:40:10.66:11,0,718	1/1:9,6:15:20.89:217,21,0	1/1:5,8:16:32.59:313,33,0	1/1:12,11:27:53.48:529,53,0	1/1:3,3:6:15.04:170,15,0
chr10	55636520	.	A	AAATAAC	17054.33	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-6.508;DP=728;FS=10.059;HRun=0;HaplotypeScore=153.6489;InbreedingCoeff=0.9985;MQ=57.85;MQ0=0;MQRankSum=-13.315;QD=51.84;ReadPosRankSum=-3.368;VQSLOD=3.3676;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:72.18:0,72,1380	0/0:11,0:11:24.08:0,24,498	0/0:30,0:28:45.62:0,46,925	0/0:19,0:17:30.93:0,31,550	0/0:38,0:38:96.21:0,96,1840	1/1:5,16:24:42.14:1371,42,0	1/1:6,18:27:36.12:1197,36,0	0/0:34,0:34:48.11:0,48,934	1/1:10,11:22:39.07:1019,39,0	1/1:7,26:36:75.24:2291,75,0	1/1:10,12:25:45.04:1180,45,0	0/0:28,0:28:60.14:0,60,1112	0/0:23,0:22:51.13:0,51,944	0/0:20,0:20:42.08:0,42,741	1/1:7,18:27:33.11:1070,33,0	0/0:25,0:25:66.15:0,66,1219	0/0:26,0:26:60.16:0,60,1166	0/0:29,0:29:69.24:0,69,1475	1/1:7,14:27:59.95:1205,60,0	1/1:3,16:21:45.09:1366,45,0	1/1:19,5:24:51:1025,51,0	0/0:26,0:26:57.19:0,57,1170	0/0:26,0:26:66.20:0,66,1317	0/0:33,0:33:72.15:0,72,1396	1/1:5,17:27:42.14:1291,42,0	1/1:20,15:35:93.30:2446,93,0	1/1:11,13:26:39.11:1048,39,0	1/1:1,5:7:18.06:546,18,0
chr10	55636710	.	A	AACAC	19336.24	PASS	AB=0.597;AC=39;AF=0.696;AN=56;BaseQRankSum=-6.574;DP=792;FS=0.000;HRun=0;HaplotypeScore=98.5453;InbreedingCoeff=0.2074;MQ=54.19;MQ0=20;MQRankSum=1.308;QD=29.25;ReadPosRankSum=6.938;VQSLOD=4.4922;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:11,1:49:99:582,0,157	1/1:2,0:5:3.01:53,3,0	0/0:49,0:18:37.40:0,37,546	0/0:42,0:24:55.27:0,55,826	0/1:10,0:34:99:529,0,640	1/1:2,38:40:66.23:1749,66,0	1/1:1,20:25:18.06:482,18,0	0/1:31,0:31:99:387,0,346	1/1:2,18:20:33.03:886,33,0	1/1:5,21:27:63.09:1221,63,0	1/1:1,26:27:72.01:1498,72,0	1/1:2,1:31:25.05:745,25,0	0/0:18,0:18:48.12:0,48,814	0/0:22,0:22:66.19:0,66,1082	1/1:1,27:26:45.15:1209,45,0	0/1:3,2:31:92.06:619,0,92	0/1:10,0:32:99:155,0,115	0/1:3,0:28:43.33:145,0,43	1/1:7,19:23:59.96:794,60,0	1/1:1,27:28:80.90:1676,81,0	1/1:3,31:38:57.20:1527,57,0	0/1:1,2:22:99:333,0,102	0/1:3,0:21:29.02:259,0,29	0/1:4,2:31:35.32:264,0,35	1/1:1,18:20:39.13:1034,39,0	1/1:1,30:31:90.48:1667,90,0	1/1:0,24:26:51.18:1360,51,0	1/1:0,4:4:6.02:161,6,0
chr10	55636718	.	CACAA	C	147.29	PASS	AB=0.950;AC=5;AF=0.089;AN=56;BaseQRankSum=-1.556;DP=768;FS=3.310;HRun=0;HaplotypeScore=165.9385;InbreedingCoeff=-0.0977;MQ=57.17;MQ0=15;MQRankSum=0.299;QD=1.03;ReadPosRankSum=-5.434;VQSLOD=0.2766;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:51:17.34:0,17,657	0/0:4,0:4:3.01:0,3,51	0/0:48,0:20:49.50:0,50,842	0/0:43,0:26:54.16:0,54,1015	0/1:30,0:30:4.92:5,0,762	0/0:37,0:37:69.22:0,69,1679	0/0:22,0:22:24.08:0,24,563	0/1:20,10:30:99:202,0,993	0/0:19,0:19:40.69:0,41,958	0/0:24,0:23:62.88:0,63,1266	0/0:24,0:24:16.79:0,17,1052	0/1:33,0:33:1.76:2,0,723	0/0:17,0:17:51.17:0,51,1129	0/0:24,0:24:61.45:0,61,1314	0/0:28,0:26:57.19:0,57,1258	0/0:31,0:31:37.68:0,38,646	0/0:29,0:29:23.91:0,24,283	0/1:29,0:29:26.37:26,0,235	0/0:22,0:20:5.17:0,5,817	0/0:27,0:27:14.96:0,15,1195	0/0:37,0:37:57.25:0,57,1604	0/0:22,0:22:26.12:0,26,425	0/1:21,0:21:14.60:15,0,262	0/0:34,0:34:31.92:0,32,520	0/0:18,0:18:39.13:0,39,1008	0/0:31,0:31:85.27:0,85,1969	0/0:24,0:24:57.20:0,57,1403	0/0:7,0:7:18.06:0,18,352
chr10	55639404	.	G	GAAAA	7684.94	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-4.405;DP=593;FS=0.000;HRun=10;HaplotypeScore=101.2396;InbreedingCoeff=0.9786;MQ=60.92;MQ0=2;MQRankSum=-3.173;QD=29.67;ReadPosRankSum=-2.630;VQSLOD=2.8723;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:87.21:0,87,1209	0/0:0,0:11:29.91:0,30,235	0/0:21,0:11:15.89:0,16,169	0/0:16,0:10:17.42:0,17,163	0/0:26,0:26:72.12:0,72,964	1/1:1,16:23:43.39:883,43,0	1/1:5,8:17:21.07:392,21,0	0/0:1,0:18:33.07:0,33,227	1/1:4,8:14:18.06:377,18,0	1/1:3,11:15:36.09:655,36,0	1/1:8,8:18:36.69:706,37,0	0/0:23,0:24:55.27:0,55,730	0/0:21,0:22:59.35:0,59,775	0/0:2,0:19:44.87:0,45,354	1/1:5,17:23:12.51:251,13,0	0/0:22,0:22:47.80:0,48,677	0/0:38,0:40:95.53:0,96,1259	0/0:24,0:24:62.75:0,63,805	1/1:6,17:25:62.96:956,63,0	1/1:6,12:20:37.36:593,37,0	1/1:3,20:24:39.05:795,39,0	0/0:25,0:25:47.88:0,48,745	0/0:15,0:16:46.13:0,46,602	0/0:16,0:16:45.13:0,45,618	1/1:5,13:22:21.07:427,21,0	1/1:8,12:21:36.09:691,36,0	1/1:3,8:11:6.96:143,7,0	1/1:6,16:25:44.68:816,45,0
chr10	55640214	.	T	TAA	3943.74	PASS	AB=0.571;AC=31;AF=0.554;AN=56;BaseQRankSum=-2.374;DP=498;FS=3.139;HRun=13;HaplotypeScore=74.4026;InbreedingCoeff=0.8467;MQ=69.45;MQ0=3;MQRankSum=-0.702;QD=16.57;ReadPosRankSum=-1.551;VQSLOD=2.6129;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:37:91.38:0,91,751	0/0:13,0:14:29.65:0,30,249	0/0:17,0:11:2.47:0,2,89	0/0:19,0:13:6.99:0,7,79	0/0:20,0:22:35.68:0,36,357	1/1:2,16:21:44.59:559,45,0	1/1:5,6:12:24.08:323,24,0	0/0:34,0:36:68.31:0,68,571	1/1:2,9:13:17.91:192,18,0	1/1:7,6:17:26.08:301,26,0	1/1:4,6:11:9.50:118,10,0	0/0:18,0:18:43.45:0,43,373	0/0:20,0:20:44.64:0,45,381	0/0:11,0:11:16.44:0,16,130	1/1:3,10:14:24.08:325,24,0	0/0:14,0:15:35.63:0,36,294	0/0:24,0:25:56.55:0,57,518	0/0:22,0:25:44.43:0,44,420	1/1:8,7:17:26.37:268,26,0	1/1:3,10:19:38.29:433,38,0	1/1:1,0:6:2.99:24,3,0	0/1:2,1:8:10.91:53,0,11	1/1:5,1:9:10.50:67,10,0	1/1:0,0:10:9.98:35,10,0	1/1:4,12:21:23.40:265,23,0	1/1:10,14:25:31.85:357,32,0	1/1:9,5:15:25.55:271,26,0	1/1:6,9:15:29.54:354,30,0
chr10	55640869	.	T	TA	2561.14	PASS	AB=0.723;AC=42;AF=0.750;AN=56;BaseQRankSum=-2.424;DP=471;FS=4.801;HRun=15;HaplotypeScore=57.2822;InbreedingCoeff=-0.0482;MQ=67.70;MQ0=28;MQRankSum=-2.070;QD=5.96;ReadPosRankSum=1.025;VQSLOD=2.4498;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:12,14:23:8.96:183,9,0	1/1:1,4:4:8.99:76,9,0	0/1:49,0:25:13.07:13,0,27	0/0:34,0:15:2.87:0,3,34	0/1:21,7:27:17.57:160,0,18	0/1:5,9:13:28.02:106,0,28	1/1:5,6:10:3:25,3,0	1/1:11,9:19:14.97:124,15,0	0/1:5,6:11:9.04:143,0,9	1/1:6,6:12:2.09:100,2,0	1/1:1,10:13:23.49:157,23,0	1/1:3,10:13:20.98:176,21,0	0/0:6,0:7:13.77:0,14,78	1/1:8,1:8:3:25,3,0	1/1:5,8:12:8.99:75,9,0	1/1:6,9:11:17.98:151,18,0	1/1:11,14:23:14.95:233,15,0	1/1:10,11:18:15.45:127,15,0	0/1:11,6:15:26.33:88,0,26	0/1:3,4:8:8.18:31,0,8	1/1:7,9:15:8.99:75,9,0	0/1:4,9:13:3.93:64,0,4	0/1:8,1:9:8.59:36,0,9	0/1:9,11:19:33.46:65,0,33	0/1:4,3:7:3.04:82,0,3	1/1:17,4:18:6.42:148,6,0	1/1:9,17:25:13.54:199,14,0	1/1:2,3:4:5.99:50,6,0
chr10	55640958	.	G	GAA	1633.94	PASS	AB=0.859;AC=28;AF=0.500;AN=56;BaseQRankSum=1.365;DP=355;FS=18.730;HRun=12;HaplotypeScore=78.8689;InbreedingCoeff=0.5820;MQ=31.83;MQ0=21;MQRankSum=-3.255;QD=8.65;ReadPosRankSum=-2.920;VQSLOD=-0.4861;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:14:14.48:0,14,136	1/1:4,0:4:4.87:18,5,0	0/0:3,0:1:0.47:0,0,1	0/1:15,0:1:0:0,0,0	0/0:26,0:26:11.10:0,11,156	1/1:3,6:8:17.51:197,18,0	1/1:5,3:8:9.45:105,9,0	0/1:12,0:11:3.66:29,0,4	1/1:6,4:6:2.84:14,3,0	1/1:10,4:13:29.49:303,29,0	1/1:6,6:11:23.99:282,24,0	0/0:10,0:10:21.01:0,21,194	0/0:8,0:4:8.67:0,9,57	0/0:12,0:11:14.65:0,15,138	1/1:5,1:4:6.02:79,6,0	0/0:12,0:9:14.34:0,14,120	0/0:19,0:17:6.60:0,7,151	0/0:17,0:9:2.78:0,3,27	1/1:8,1:7:8.86:99,9,0	1/1:7,3:11:19.09:163,19,0	1/1:5,1:3:3.90:44,4,0	0/0:19,0:17:16.53:0,17,145	0/0:18,0:16:17.61:0,18,146	0/0:5,0:5:6:0,6,54	1/1:9,3:13:16.80:160,17,0	0/1:16,3:16:13.61:47,0,14	0/1:10,6:11:29.47:202,0,29	1/1:8,1:5:8.98:81,9,0
chr10	55641009	.	C	CAAA	2732.72	PASS	AB=0.901;AC=40;AF=0.714;AN=56;BaseQRankSum=-0.569;DP=421;FS=0.787;HRun=13;HaplotypeScore=85.1046;InbreedingCoeff=0.3156;MQ=51.05;MQ0=17;MQRankSum=-2.491;QD=7.83;ReadPosRankSum=0.854;VQSLOD=-0.1418;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:12,0:16:13.61:74,14,0	0/0:3,0:3:5.86:0,6,35	0/1:27,0:11:14.46:14,0,73	0/0:34,0:8:5.60:0,6,67	0/1:19,0:22:4.84:5,0,63	1/1:15,0:11:20.95:217,21,0	1/1:4,0:3:5.95:72,6,0	0/0:13,0:22:16.61:0,17,94	1/1:8,0:7:9.01:118,9,0	1/1:19,1:17:21.55:256,22,0	1/1:9,9:15:22.24:276,22,0	1/1:9,0:9:4.20:23,4,0	0/1:10,0:10:11.11:11,0,83	0/0:9,0:9:7.67:0,8,67	1/1:10,1:12:20.71:231,21,0	1/1:10,0:11:11.26:59,11,0	1/1:16,0:19:13.47:54,13,0	0/1:15,0:12:19.96:25,0,20	1/1:5,9:12:27.03:365,27,0	1/1:7,4:11:17.54:229,18,0	0/1:7,1:4:0:0,0,0	1/1:6,0:9:5.96:19,6,0	0/1:10,0:16:5.68:6,0,8	0/1:4,0:4:19.29:19,0,24	1/1:16,0:14:16.46:111,16,0	1/1:22,3:22:29:442,29,0	1/1:16,1:13:17.60:223,18,0	0/1:9,1:5:4.05:48,0,4
chr10	55641452	.	C	CA	492.90	PASS	AB=0.927;AC=11;AF=0.196;AN=56;BaseQRankSum=5.231;DP=550;FS=0.579;HRun=11;HaplotypeScore=84.2580;InbreedingCoeff=0.3313;MQ=54.14;MQ0=22;MQRankSum=0.319;QD=3.52;ReadPosRankSum=-4.169;VQSLOD=-0.4625;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:39:94.42:0,94,741	1/1:6,0:10:8.52:43,9,0	0/0:6,0:4:5.93:0,6,46	0/1:9,0:6:1.02:1,0,45	0/0:16,0:17:40.88:0,41,308	0/1:20,3:23:17.85:18,0,146	0/0:16,0:15:18.62:0,19,103	1/1:26,2:39:66.33:373,66,0	0/1:12,2:14:9.31:9,0,99	0/0:17,0:17:8.81:0,9,76	0/1:15,0:14:8.58:9,0,28	0/0:31,0:29:39.41:0,39,319	0/0:16,0:15:23.04:0,23,184	0/0:13,0:11:17.92:0,18,139	0/0:15,0:15:22.23:0,22,112	0/0:11,0:11:17.87:0,18,132	0/0:34,1:33:53.21:0,53,592	0/0:28,0:28:64.57:0,65,492	0/0:28,0:27:3.65:0,4,129	0/0:24,0:21:17.71:0,18,114	0/1:12,2:13:19.48:50,0,19	0/0:12,0:12:23.87:0,24,181	0/0:7,0:7:12.42:0,12,94	0/0:18,0:17:35.85:0,36,278	1/1:9,5:12:0.30:133,0,0	0/0:26,1:26:29.94:0,30,175	0/0:27,0:26:15.01:0,15,150	0/0:18,0:18:16.14:0,16,88
chr10	55642074	.	AACACACAC	A	4846.21	PASS	AB=0.685;AC=36;AF=0.667;AN=54;BaseQRankSum=2.746;DP=547;FS=10.279;HRun=0;HaplotypeScore=143.5734;InbreedingCoeff=0.2963;MQ=56.74;MQ0=9;MQRankSum=-4.286;QD=11.30;ReadPosRankSum=3.941;VQSLOD=3.2741;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:38:8.08:8,0,84	./.	0/0:31,0:17:3.01:0,3,98	0/0:37,0:16:7.25:0,7,140	0/1:7,0:16:0.89:1,0,134	1/1:10,11:22:26.88:490,27,0	1/1:12,7:20:9.86:122,10,0	0/0:15,0:15:15.05:0,15,471	1/1:10,10:20:21.03:339,21,0	1/1:17,8:26:20.92:473,21,0	1/1:3,9:12:23.66:274,24,0	0/1:11,0:23:30.58:68,0,31	0/0:10,0:10:18.06:0,18,674	0/0:16,0:16:39.13:0,39,1311	1/1:11,14:26:26.72:506,27,0	1/1:10,2:23:25.33:271,25,0	0/1:18,1:35:45.67:141,0,46	0/1:10,1:21:29.09:118,0,29	1/1:6,4:10:11.97:244,12,0	1/1:1,6:7:17.87:194,18,0	1/1:22,11:32:1.35:3,1,0	0/1:2,0:4:7.97:50,0,8	0/1:4,2:7:21.27:168,0,21	0/1:21,0:28:15.64:64,0,16	1/1:2,7:9:13.11:239,13,0	1/1:10,14:25:34.91:775,35,0	1/1:10,7:18:14.20:283,14,0	1/1:4,0:5:2.90:16,3,0
chr10	55642291	.	AAAATAAAT	A	1608.96	PASS	AB=0.951;AC=12;AF=0.214;AN=56;BaseQRankSum=-1.571;DP=312;FS=29.919;HRun=0;HaplotypeScore=81.7119;InbreedingCoeff=0.0804;MQ=55.26;MQ0=2;MQRankSum=-0.375;QD=15.93;ReadPosRankSum=2.335;VQSLOD=0.6240;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:27.01:0,27,650	0/0:3,0:3:6.01:0,6,114	0/0:14,0:9:14.59:0,15,201	0/0:6,0:6:9.03:0,9,129	0/0:9,0:9:27.05:0,27,603	0/0:11,0:11:3.01:0,3,79	1/1:10,0:10:20.99:225,21,0	0/0:41,0:40:63.61:0,64,1261	0/1:10,0:10:99:129,0,201	0/1:7,1:8:23.56:117,0,24	0/1:12,0:12:56.44:114,0,56	0/0:10,0:10:17.99:0,18,530	0/0:6,0:6:12.04:0,12,510	0/0:8,0:8:21.06:0,21,792	0/0:11,0:11:3.01:0,3,80	0/0:11,0:11:24.04:0,24,691	0/0:26,0:26:66.18:0,66,2117	0/0:23,0:23:57.10:0,57,1541	0/1:16,1:18:85.64:359,0,86	0/1:8,0:10:99:204,0,139	0/1:10,0:10:37.96:38,0,139	0/0:6,0:6:6.02:0,6,181	0/0:7,0:7:15.04:0,15,438	0/0:3,0:3:6.01:0,6,155	0/0:6,0:6:3.01:0,3,68	0/1:15,1:16:1.24:478,0,1	0/1:4,1:5:53.09:70,0,53	1/1:2,0:2:5.02:29,5,0
chr10	55642301	.	A	AATACATAAATAAATAAATAC	6904.63	PASS	AB=1.000;AC=28;AF=0.500;AN=56;BaseQRankSum=1.664;DP=331;FS=4.215;HRun=0;HaplotypeScore=146.1406;InbreedingCoeff=0.7306;MQ=52.08;MQ0=2;MQRankSum=-5.177;QD=34.18;ReadPosRankSum=-0.636;VQSLOD=3.6164;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:35.68:0,36,797	0/1:3,0:3:18.87:72,0,19	0/0:12,0:7:14.59:0,15,201	0/0:5,0:5:9.03:0,9,129	0/0:10,0:10:30.01:0,30,702	1/1:2,6:19:3.01:288,3,0	1/1:8,0:8:24.04:291,24,0	0/1:43,0:41:99:263,0,307	1/1:9,0:9:21.05:653,21,0	1/1:1,0:10:15.51:387,16,0	1/1:0,6:15:12.04:414,12,0	0/0:9,0:9:17.99:0,18,651	0/0:5,0:5:15.04:0,15,701	0/0:8,0:8:21.06:0,21,923	1/1:0,4:9:3.01:287,3,0	0/0:9,0:9:24.04:0,24,777	0/0:26,0:26:69.18:0,69,2303	0/0:20,0:20:44.53:0,45,1761	1/1:8,0:23:54.06:1469,54,0	1/1:10,0:10:27:453,27,0	1/1:6,0:6:17.99:272,18,0	0/0:3,0:3:8.99:0,9,230	0/0:8,0:8:21.01:0,21,502	0/0:2,0:2:6.01:0,6,125	1/1:1,2:13:3.01:288,3,0	1/1:3,0:22:54.11:1234,54,0	1/1:1,0:6:9.03:272,9,0	1/1:6,0:6:14.99:263,15,0
chr10	55643782	.	T	TG	618.38	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=1.346;DP=534;FS=0.746;HRun=0;HaplotypeScore=136.3123;InbreedingCoeff=0.8642;MQ=53.66;MQ0=11;MQRankSum=-3.777;QD=17.67;ReadPosRankSum=1.639;VQSLOD=5.5054;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:27:53.27:0,53,378	1/1:2,7:7:21.02:221,21,0	0/0:18,0:7:19.46:0,19,194	0/0:21,0:11:0.24:0,0,115	0/0:25,0:25:63.17:0,63,429	0/0:25,0:19:29.82:0,30,236	0/0:12,0:12:28.71:0,29,180	1/1:10,16:23:19.44:516,19,0	0/0:13,0:11:19.90:0,20,138	0/0:20,0:17:40.87:0,41,306	0/0:21,0:20:40.64:0,41,302	0/0:11,0:10:26.65:0,27,191	0/0:18,0:18:48.09:0,48,608	0/0:17,0:17:34.51:0,35,461	0/0:17,0:15:41.25:0,41,301	0/0:21,0:21:59.28:0,59,418	0/0:18,0:16:42.05:0,42,300	0/0:12,0:12:32.90:0,33,213	0/0:19,0:16:43.82:0,44,357	0/0:18,0:16:29.29:0,29,226	0/0:12,0:10:15.57:0,16,98	0/0:20,0:20:49.20:0,49,373	0/0:18,0:17:43.23:0,43,278	0/0:16,0:15:24.48:0,24,137	0/0:20,0:16:38.99:0,39,246	0/0:33,0:29:70.38:0,70,531	0/0:26,0:24:47.04:0,47,316	0/0:18,0:17:32.70:0,33,258
chr10	55643784	.	TTG	T	3158.45	PASS	AB=1.000;AC=35;AF=0.625;AN=56;BaseQRankSum=2.523;DP=528;FS=0.398;HRun=0;HaplotypeScore=128.2414;InbreedingCoeff=0.2535;MQ=52.42;MQ0=12;MQRankSum=-2.798;QD=7.29;ReadPosRankSum=-4.177;VQSLOD=2.3283;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:28:52.83:53,0,196	0/0:9,0:7:12.21:0,12,35	0/0:20,0:8:1.61:0,2,95	0/0:20,0:10:19.01:0,19,111	0/1:26,0:26:8.10:8,0,385	1/1:23,0:17:21.91:143,22,0	1/1:10,1:11:29.59:225,30,0	0/1:26,0:23:10.38:10,0,39	1/1:13,0:11:14.67:104,15,0	1/1:18,2:17:41.86:312,42,0	1/1:18,2:19:29.38:256,29,0	0/0:11,0:10:2.71:0,3,176	0/0:18,0:18:41.98:0,42,554	0/0:17,0:17:34.28:0,34,449	1/1:16,0:14:21.16:199,21,0	0/1:20,0:20:17.13:17,0,458	0/1:18,0:16:56.71:59,0,57	0/1:11,0:11:29.98:30,0,111	1/1:18,1:16:17.03:226,17,0	1/1:16,1:15:19.89:174,20,0	1/1:12,0:9:13.80:79,14,0	0/1:20,0:20:74.92:75,0,196	0/1:20,0:19:59.11:59,0,128	0/1:16,0:15:34.14:70,0,34	1/1:19,1:16:36.20:246,36,0	1/1:31,0:27:59.69:420,60,0	1/1:24,2:24:43.38:313,43,0	1/1:18,0:17:35.53:268,36,0
chr10	55643785	.	TG	T	4659.77	PASS	AB=0.996;AC=40;AF=0.714;AN=56;BaseQRankSum=6.732;DP=523;FS=38.080;HRun=1;HaplotypeScore=118.1438;InbreedingCoeff=-0.0023;MQ=51.20;MQ0=13;MQRankSum=-4.539;QD=9.55;ReadPosRankSum=-2.090;VQSLOD=0.2730;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:26:99:128,0,117	1/1:9,0:7:11.24:32,11,0	0/1:18,1:7:5.52:6,0,53	0/1:20,0:10:4.20:4,0,53	0/1:26,0:26:46.11:46,0,261	1/1:17,5:17:20.27:197,20,0	1/1:8,0:11:29.67:225,30,0	0/1:26,0:23:0.95:84,0,1	1/1:8,4:10:16.36:115,16,0	1/1:15,4:16:43.34:351,43,0	1/1:14,6:19:37.20:338,37,0	0/1:10,0:9:15.92:16,0,120	0/0:18,0:18:22.14:0,22,391	0/0:16,1:17:3.85:0,4,314	1/1:9,4:13:34.64:304,35,0	0/1:20,0:20:42.21:42,0,302	0/1:19,0:17:16.56:132,0,17	0/1:12,0:12:45.70:66,0,46	1/1:15,4:16:36.64:261,37,0	1/1:10,7:15:22.48:250,22,0	1/1:9,2:8:13.89:76,14,0	0/1:20,0:20:99:109,0,128	0/1:19,0:18:69.65:104,0,70	0/1:17,0:16:10.51:86,0,11	1/1:13,6:16:37.41:315,37,0	1/1:22,7:27:62.46:618,62,0	1/1:20,3:24:48.88:366,49,0	1/1:13,5:17:35.91:388,36,0
chr10	55643786	.	GT	G	854.16	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=5.028;DP=522;FS=12.529;HRun=12;HaplotypeScore=130.7669;InbreedingCoeff=0.4580;MQ=50.96;MQ0=14;MQRankSum=0.672;QD=3.63;ReadPosRankSum=1.713;VQSLOD=0.5030;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:26:33.60:0,34,355	1/1:3,6:7:17.66:93,18,0	0/0:20,0:7:3.95:0,4,65	0/0:20,0:10:6.69:0,7,85	0/0:26,0:26:58.60:0,59,626	0/1:23,0:17:19.88:47,0,20	1/1:11,0:11:5.49:24,5,0	1/1:8,18:23:54.33:376,54,0	0/0:12,0:10:1.25:0,1,16	0/1:19,0:16:12.55:20,0,13	0/1:20,0:19:30.03:51,0,30	0/0:10,0:9:18.93:0,19,231	0/0:16,0:16:38.57:0,39,499	0/0:17,0:17:23.07:0,23,449	1/1:15,0:13:2.05:61,2,0	0/0:20,0:20:44.50:0,44,553	0/0:19,0:17:28.43:0,28,194	0/0:12,0:11:25.84:0,26,209	0/0:20,0:17:10.75:0,11,98	0/1:17,0:15:6.42:48,0,6	0/0:11,0:8:2.03:0,2,5	0/0:19,0:19:36.52:0,37,351	0/0:20,0:19:38.45:0,38,332	0/0:16,0:15:16.77:0,17,135	1/1:20,0:16:6.07:60,6,0	1/1:32,0:28:10.90:127,11,0	0/1:25,0:23:23.31:23,0,26	1/1:18,0:17:20.34:107,20,0
chr10	55643792	.	TTTTTTG	T	3922.19	PASS	AB=1.000;AC=31;AF=0.554;AN=56;BaseQRankSum=3.607;DP=525;FS=0.403;HRun=0;HaplotypeScore=154.9082;InbreedingCoeff=0.6447;MQ=44.87;MQ0=16;MQRankSum=-1.729;QD=11.78;ReadPosRankSum=-2.746;VQSLOD=2.4011;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:25:18.63:0,19,1033	0/1:8,0:6:3.80:4,0,49	0/0:15,0:3:8.66:0,9,92	0/0:18,0:8:13.39:0,13,104	0/0:31,0:31:31.35:0,31,1293	1/1:24,0:18:23.33:253,23,0	1/1:11,1:12:19.36:247,19,0	0/1:24,0:21:42.65:311,0,43	1/1:12,0:10:11.93:108,12,0	1/1:18,1:16:36.74:288,37,0	1/1:20,1:20:36.01:370,36,0	0/0:12,0:11:23.66:0,24,500	0/0:16,0:16:33.06:0,33,786	0/0:16,0:16:38.98:0,39,1002	1/1:19,1:17:6.49:365,6,0	0/0:23,0:23:56.04:0,56,1349	0/1:21,0:19:0.08:0,0,483	0/0:13,0:11:5.53:0,6,422	1/1:17,0:13:28.60:208,29,0	1/1:16,0:14:23.27:171,23,0	1/1:11,0:8:7.48:70,7,0	0/1:19,0:18:11.73:12,0,770	0/0:19,0:18:13.96:0,14,798	0/1:19,0:17:11.77:12,0,344	1/1:19,0:15:33.03:365,33,0	1/1:29,0:25:45.56:437,46,0	1/1:22,1:21:38.25:408,38,0	1/1:19,0:18:26.43:293,26,0
chr10	55643793	.	TTTTTG	T	5751.09	PASS	AB=1.000;AC=31;AF=0.554;AN=56;BaseQRankSum=3.000;DP=530;FS=0.000;HRun=0;HaplotypeScore=142.9934;InbreedingCoeff=0.5216;MQ=44.70;MQ0=16;MQRankSum=-2.372;QD=16.67;ReadPosRankSum=-4.846;VQSLOD=3.3021;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:25:20.22:0,20,850	0/0:3,0:6:0.43:0,0,82	0/0:15,0:3:0.57:0,1,40	0/0:18,0:8:1.77:0,2,80	0/0:31,0:31:6.70:0,7,1053	1/1:6,18:18:23.99:365,24,0	1/1:10,2:12:29.79:361,30,0	0/1:12,0:21:99:198,0,142	1/1:5,7:10:11.97:179,12,0	1/1:14,6:17:44.22:543,44,0	1/1:9,12:20:40.76:492,41,0	0/0:13,0:12:22.39:0,22,447	0/0:17,0:17:32.55:0,33,668	0/0:16,0:16:38.98:0,39,867	1/1:16,4:17:21.76:474,22,0	0/0:23,0:23:55.04:0,55,1173	0/1:21,0:19:5.32:5,0,364	0/0:14,0:12:3.92:0,4,339	1/1:8,9:13:32.01:383,32,0	1/1:8,8:14:23.90:217,24,0	1/1:8,3:8:7.59:158,8,0	0/1:19,0:18:17.12:17,0,644	0/1:19,0:18:6.06:6,0,633	0/1:19,0:17:12.89:13,0,245	1/1:5,14:15:33.11:612,33,0	1/1:12,17:25:50.60:664,51,0	1/1:9,14:21:41.43:576,41,0	1/1:15,4:18:33.06:488,33,0
chr10	55643794	.	TTTTG	T	4183.28	PASS	AB=1.000;AC=31;AF=0.554;AN=56;BaseQRankSum=3.784;DP=529;FS=1.286;HRun=0;HaplotypeScore=140.4768;InbreedingCoeff=0.5489;MQ=44.63;MQ0=18;MQRankSum=-2.955;QD=12.23;ReadPosRankSum=-5.287;VQSLOD=2.0223;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:26:21.27:0,21,697	0/0:8,0:6:4.92:0,5,101	0/0:15,0:3:2.29:0,2,78	0/0:19,0:8:12.62:0,13,75	0/0:31,0:31:1.40:0,1,927	1/1:21,3:18:23.88:257,24,0	1/1:12,0:12:30.41:265,30,0	0/1:22,0:19:97.36:153,0,97	1/1:11,0:9:11.95:129,12,0	1/1:20,1:18:46.21:421,46,0	1/1:19,1:19:39.85:357,40,0	0/0:13,0:12:18.42:0,18,390	0/0:17,0:17:32.87:0,33,570	0/0:16,0:16:38.89:0,39,757	1/1:20,0:17:32.88:393,33,0	0/0:23,0:23:48.95:0,49,993	0/1:22,0:20:5.15:5,0,414	0/0:14,0:12:3.09:0,3,286	1/1:17,0:13:33.33:273,33,0	1/1:16,0:14:22.16:176,22,0	1/1:12,0:8:8.24:94,8,0	0/1:19,0:18:16.48:16,0,550	0/1:19,0:18:6.98:7,0,563	0/1:19,0:17:17.03:17,0,240	1/1:17,1:14:33.09:385,33,0	1/1:29,0:25:50.39:489,50,0	1/1:23,0:21:41.07:414,41,0	1/1:17,1:17:32.47:332,32,0
chr10	55643795	.	TTTG	T	3587.54	PASS	AB=1.000;AC=31;AF=0.554;AN=56;BaseQRankSum=4.511;DP=524;FS=0.400;HRun=0;HaplotypeScore=134.0821;InbreedingCoeff=0.5517;MQ=44.62;MQ0=18;MQRankSum=-2.673;QD=10.68;ReadPosRankSum=-5.304;VQSLOD=1.5629;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:27:12.85:0,13,521	0/0:8,0:6:3.86:0,4,63	0/0:15,0:3:2.10:0,2,76	0/0:19,0:8:4.76:0,5,63	0/0:31,0:31:6.91:0,7,767	1/1:24,0:18:23.96:232,24,0	1/1:12,0:12:31.89:255,32,0	0/1:21,0:18:20.72:129,0,21	1/1:11,0:9:11.94:109,12,0	1/1:20,0:17:43.32:307,43,0	1/1:19,0:18:40.68:303,41,0	0/0:13,0:12:17.98:0,18,312	0/0:17,0:17:33.01:0,33,481	0/0:16,0:16:38.40:0,38,622	1/1:19,1:17:27.47:306,27,0	0/0:22,0:22:24.84:0,25,773	0/1:21,0:19:4.27:4,0,355	0/0:15,0:13:3.87:0,4,210	1/1:15,1:12:33.15:247,33,0	1/1:15,1:14:19.37:165,19,0	1/1:12,0:8:6.28:75,6,0	0/1:19,0:18:15.05:15,0,422	0/1:19,0:18:5.03:5,0,442	0/1:19,0:17:25.12:25,0,210	1/1:17,1:14:33.05:329,33,0	1/1:27,2:25:50.61:461,51,0	1/1:23,0:21:33.86:327,34,0	1/1:17,0:16:32.70:295,33,0
chr10	55643796	.	TTG	T	3107.64	PASS	AB=0.992;AC=34;AF=0.607;AN=56;BaseQRankSum=6.276;DP=523;FS=2.376;HRun=0;HaplotypeScore=127.9110;InbreedingCoeff=0.4912;MQ=44.56;MQ0=18;MQRankSum=-2.358;QD=8.35;ReadPosRankSum=-4.008;VQSLOD=2.3732;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:32,0:27:27.06:27,0,362	0/1:8,0:6:7.99:8,0,12	0/0:15,0:3:2.20:0,2,59	0/1:18,1:8:1.69:2,0,47	0/0:29,0:29:10.58:0,11,605	1/1:24,0:18:23.93:207,24,0	1/1:12,0:12:31.45:221,31,0	1/1:21,0:18:28.70:221,29,0	1/1:8,3:9:11.92:100,12,0	1/1:20,0:17:37.63:246,38,0	1/1:18,1:18:40.31:269,40,0	0/0:13,0:12:9.15:0,9,222	0/0:17,0:17:32.95:0,33,391	0/0:17,0:17:27.30:0,27,492	1/1:20,0:17:29.76:266,30,0	0/0:24,0:23:11.77:0,12,580	0/0:21,0:19:3:0,3,286	0/0:15,0:13:5.91:0,6,143	1/1:16,0:12:32.82:229,33,0	1/1:16,0:14:18.02:158,18,0	1/1:12,0:8:5.58:60,6,0	0/1:19,0:18:9.17:9,0,307	0/1:19,0:18:21.60:22,0,305	0/1:18,0:16:31.27:31,0,161	1/1:18,0:14:32.90:270,33,0	1/1:28,0:24:50.58:402,51,0	1/1:21,2:21:35.68:282,36,0	1/1:17,0:16:32.15:271,32,0
chr10	55643798	.	G	GTT	2560.52	PASS	AB=1.000;AC=36;AF=0.643;AN=56;BaseQRankSum=8.720;DP=525;FS=5.492;HRun=10;HaplotypeScore=137.5064;InbreedingCoeff=0.5078;MQ=44.19;MQ0=22;MQRankSum=-4.960;QD=6.52;ReadPosRankSum=-0.414;VQSLOD=0.5750;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:32,0:26:12.57:13,0,219	1/1:6,0:7:12.52:82,13,0	0/0:14,0:3:5.88:0,6,45	0/0:20,0:8:5.12:0,5,47	0/0:29,0:29:44.53:0,45,402	1/1:24,0:18:16.65:130,17,0	1/1:12,1:13:17.10:150,17,0	1/1:14,0:18:28.37:144,28,0	1/1:11,0:9:7.13:52,7,0	1/1:15,6:18:34.72:370,35,0	1/1:19,1:19:22.50:236,23,0	0/0:12,0:11:19.46:0,19,176	0/0:17,0:17:18.01:0,18,183	0/0:16,0:16:32.95:0,33,319	1/1:20,2:19:19.09:164,19,0	0/0:23,0:22:28.16:0,28,324	0/1:19,0:17:9.03:9,0,148	0/1:14,0:12:35.08:35,0,47	1/1:16,0:12:21.05:253,21,0	1/1:17,0:15:7.79:60,8,0	1/1:10,2:7:9.02:99,9,0	0/1:18,0:17:6:6,0,163	0/1:18,0:17:26.47:26,0,162	0/1:18,0:16:5.21:5,0,102	1/1:18,0:14:30.88:242,31,0	1/1:28,0:24:28.82:267,29,0	1/1:22,0:21:24.29:200,24,0	1/1:16,1:16:22.38:213,22,0
chr10	55644710	.	A	AT	4887.55	PASS	AB=0.684;AC=25;AF=0.446;AN=56;BaseQRankSum=-6.938;DP=632;FS=4.332;HRun=12;HaplotypeScore=69.5775;InbreedingCoeff=0.6486;MQ=71.33;MQ0=1;MQRankSum=-1.480;QD=13.65;ReadPosRankSum=-0.939;VQSLOD=4.9524;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,1:33:24.46:0,24,235	0/0:14,0:15:37.80:0,38,268	0/0:9,0:9:11.92:0,12,87	0/0:8,0:10:8.55:0,9,69	0/1:24,3:31:42.96:43,0,321	1/1:10,22:34:62.89:588,63,0	1/1:7,9:17:17.14:185,17,0	0/0:36,0:37:57.74:0,58,550	1/1:2,18:20:42.02:399,42,0	1/1:15,28:44:50.97:611,51,0	0/1:5,10:18:2.78:177,0,3	0/0:20,1:23:21.71:0,22,142	0/0:17,0:19:43.73:0,44,312	0/0:24,0:24:24.43:0,24,342	1/1:4,17:22:36.04:342,36,0	1/1:1,23:24:63.10:613,63,0	0/0:20,1:21:12.49:0,12,253	0/0:23,0:23:53.61:0,54,394	1/1:8,12:20:14.09:280,14,0	1/1:5,20:26:58.58:463,59,0	0/1:10,8:18:34.32:176,0,34	0/0:19,0:19:47.66:0,48,350	0/0:23,0:24:24.81:0,25,309	0/0:17,0:17:32.76:0,33,241	0/1:12,18:29:7.76:256,0,8	1/1:13,11:24:11.11:258,11,0	0/1:6,18:24:8.64:410,0,9	1/1:2,3:5:9.01:88,9,0
chr10	55646926	.	G	GC	4462.73	PASS	AB=0.724;AC=25;AF=0.446;AN=56;BaseQRankSum=-8.539;DP=546;FS=10.510;HRun=9;HaplotypeScore=64.1513;InbreedingCoeff=0.7185;MQ=80.40;MQ0=0;MQRankSum=-3.271;QD=17.36;ReadPosRankSum=-1.010;VQSLOD=3.8931;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:75.98:0,76,633	0/0:12,0:12:23.98:0,24,208	0/1:11,1:12:11.16:11,0,111	0/0:19,0:19:32.65:0,33,267	0/0:32,0:32:75.85:0,76,653	1/1:3,16:19:13.07:372,13,0	1/1:7,20:27:45.06:482,45,0	0/0:17,0:18:41.02:0,41,345	1/1:3,11:14:27.07:299,27,0	1/1:9,12:21:36.94:379,37,0	0/1:5,5:10:16.73:57,0,17	0/0:15,0:15:44.99:0,45,391	0/0:16,1:19:9.88:0,10,291	0/0:21,0:21:50.96:0,51,440	1/1:6,10:15:4.03:273,4,0	0/0:14,0:14:38.98:0,39,335	0/0:27,0:28:76.99:0,77,654	0/0:21,0:21:56.98:0,57,495	1/1:9,9:18:1.47:227,1,0	0/1:4,10:14:1.99:206,0,2	1/1:5,27:32:31.10:571,31,0	0/0:13,0:13:38.93:0,39,321	0/0:16,2:18:2.53:0,3,253	0/0:24,0:24:53.53:0,54,442	1/1:2,17:19:39.11:431,39,0	1/1:8,13:21:39.09:422,39,0	1/1:4,10:14:7.03:300,7,0	1/1:2,17:20:39.11:431,39,0
chr10	55647069	.	GT	G	4616.37	PASS	AB=0.932;AC=29;AF=0.518;AN=56;BaseQRankSum=15.157;DP=593;FS=4.720;HRun=12;HaplotypeScore=79.3712;InbreedingCoeff=0.7896;MQ=68.52;MQ0=5;MQRankSum=0.880;QD=14.61;ReadPosRankSum=1.581;VQSLOD=5.6791;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,1:34:66.55:0,67,816	0/0:8,0:8:21.04:0,21,213	0/0:30,3:15:9.20:0,9,133	0/0:11,1:5:6.01:0,6,56	0/0:19,1:22:30.70:0,31,478	1/1:4,21:25:21.23:261,21,0	1/1:4,16:20:38.82:301,39,0	0/0:35,0:35:32.32:0,32,667	1/1:3,13:16:21.07:259,21,0	1/1:5,26:31:74.66:576,75,0	1/1:4,20:24:59.68:462,60,0	0/0:21,0:21:53.93:0,54,525	0/0:16,1:17:18.81:0,19,358	0/0:25,0:25:33.93:0,34,518	1/1:2,21:23:56.78:441,57,0	0/1:18,1:19:6.76:7,0,291	0/0:24,0:24:69.13:0,69,694	0/1:14,1:16:7.77:8,0,228	1/1:7,16:23:47.75:364,48,0	1/1:3,24:27:71.68:554,72,0	1/1:7,6:13:7.28:146,7,0	0/1:17,2:19:1.40:1,0,342	0/0:20,2:22:7.63:0,8,435	0/0:23,1:24:42.89:0,43,616	1/1:2,12:14:38.08:286,38,0	1/1:3,20:23:59.74:464,60,0	1/1:1,17:18:47.82:371,48,0	1/1:0,5:5:14.94:116,15,0
chr10	55647429	.	C	CA	7491.08	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=15.510;DP=579;FS=8.762;HRun=1;HaplotypeScore=78.0014;InbreedingCoeff=0.9839;MQ=75.55;MQ0=0;MQRankSum=-2.384;QD=28.70;ReadPosRankSum=0.615;VQSLOD=3.7492;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,120,1554	0/0:10,0:10:30.10:0,30,389	0/0:17,0:17:45.15:0,45,579	0/0:21,0:21:45.02:0,45,576	0/0:31,0:31:93.26:0,93,1175	1/1:5,16:21:54.68:636,55,0	1/1:3,21:24:48.87:612,49,0	0/0:22,0:22:54.18:0,54,701	1/1:4,14:18:45.17:520,45,0	1/1:5,21:26:57.22:719,57,0	1/1:1,15:17:45.08:493,45,0	0/0:27,0:27:81.26:0,81,1051	0/0:12,0:12:33.11:0,33,428	0/0:20,0:20:57.18:0,57,736	1/1:4,16:20:53.79:594,54,0	0/0:22,0:22:66.17:0,66,838	0/0:26,0:26:75.24:0,75,968	0/0:18,0:18:54.15:0,54,684	1/1:4,13:17:6.68:420,7,0	1/1:0,24:24:69.20:798,69,0	1/1:1,24:25:57.64:667,58,0	0/0:20,0:20:57.14:0,57,705	0/0:9,0:9:27.07:0,27,334	0/0:23,0:23:66.20:0,66,840	1/1:1,12:13:36.10:419,36,0	1/1:0,21:21:63.15:716,63,0	1/1:2,18:21:48.13:561,48,0	1/1:4,10:14:13.48:337,13,0
chr10	55650511	.	GT	G	1933.06	PASS	AB=0.733;AC=26;AF=0.464;AN=56;BaseQRankSum=6.202;DP=622;FS=7.256;HRun=16;HaplotypeScore=75.2504;InbreedingCoeff=0.3117;MQ=76.06;MQ0=2;MQRankSum=-0.101;QD=4.86;ReadPosRankSum=2.671;VQSLOD=1.9625;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,4:23:5.43:0,5,222	0/1:8,9:18:76.74:77,0,80	0/1:32,0:21:0.14:0,0,83	0/1:28,0:19:9.89:10,0,24	0/0:26,3:30:31.93:0,32,406	0/1:6,7:13:10.53:57,0,11	0/1:8,14:24:8:167,0,8	1/1:11,2:29:35.06:134,35,0	0/1:9,7:17:24.86:88,0,25	1/1:12,14:28:42.98:255,43,0	1/1:2,13:17:27.38:155,27,0	0/0:18,0:18:12.76:0,13,193	0/0:16,1:19:23.79:0,24,184	0/1:15,2:18:6.24:6,0,154	0/1:10,8:19:17.54:103,0,18	0/0:23,0:29:50.48:0,50,383	0/0:23,0:23:41.70:0,42,325	0/0:22,1:23:26.76:0,27,316	1/1:13,12:26:19.21:206,19,0	1/1:12,19:32:11.62:177,12,0	1/1:6,6:12:13.93:88,14,0	0/0:17,0:17:32.94:0,33,270	0/0:24,1:29:6.22:0,6,324	0/0:12,0:13:13.88:0,14,192	0/1:2,7:9:16.37:27,0,16	1/1:11,16:28:27.23:273,27,0	1/1:9,16:29:37.34:203,37,0	0/1:7,11:19:21.82:103,0,22
chr10	55651221	.	TCAC	T	155.03	PASS	AB=1.000;AC=5;AF=0.096;AN=52;BaseQRankSum=0.883;DP=371;FS=3.299;HRun=0;HaplotypeScore=59.3752;InbreedingCoeff=0.6002;MQ=54.13;MQ0=20;MQRankSum=0.845;QD=5.74;ReadPosRankSum=-0.957;VQSLOD=1.6951;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:21.49:0,21,320	1/1:3,0:3:9.03:127,9,0	./.	0/0:16,0:10:2.96:0,3,19	0/1:4,0:4:0:0,0,0	0/0:12,0:11:21.07:0,21,391	0/0:13,0:12:21.07:0,21,385	1/1:13,7:20:11.01:133,11,0	0/0:6,0:6:9.03:0,9,168	0/0:18,0:17:21.44:0,21,359	0/0:4,0:3:6.02:0,6,111	0/0:10,0:10:21.07:0,21,403	0/0:8,0:8:3.01:0,3,36	0/0:18,0:17:40.28:0,40,641	0/0:8,0:8:15.04:0,15,261	0/0:5,0:5:11.40:0,11,191	0/0:17,0:17:36.12:0,36,702	0/0:10,0:10:15:0,15,215	0/0:10,0:5:12.04:0,12,231	0/0:10,0:10:15.05:0,15,254	0/0:40,0:33:50.67:0,51,864	0/0:4,0:4:9.03:0,9,164	0/0:5,0:5:3.01:0,3,61	0/0:44,0:44:67.12:0,67,1373	0/0:16,0:14:26.68:0,27,460	0/0:18,0:17:27:0,27,440	0/0:4,0:3:9.03:0,9,166	./.
chr10	55651367	.	C	CT	2473.13	PASS	AB=0.730;AC=26;AF=0.464;AN=56;BaseQRankSum=5.955;DP=355;FS=0.527;HRun=12;HaplotypeScore=70.2259;InbreedingCoeff=0.4009;MQ=69.12;MQ0=2;MQRankSum=-2.350;QD=10.94;ReadPosRankSum=-0.119;VQSLOD=3.1104;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,1:22:24.47:0,24,339	1/1:1,3:4:6.01:58,6,0	0/0:26,0:19:13.49:0,13,162	0/0:20,0:10:5.09:0,5,59	0/1:7,0:7:11.27:11,0,89	0/1:6,11:18:25.52:236,0,26	0/1:5,11:17:13.74:184,0,14	0/1:5,5:9:0.90:142,0,1	1/1:0,7:7:12.02:117,12,0	0/1:12,9:21:20.22:264,0,20	0/1:6,4:10:10.14:50,0,10	0/0:7,0:7:14.87:0,15,107	0/0:8,0:8:20.80:0,21,147	0/0:5,0:5:11.92:0,12,87	1/1:2,12:14:31.13:279,31,0	0/0:6,0:7:19.93:0,20,137	0/1:12,1:13:4.01:4,0,181	0/0:7,0:7:17.82:0,18,126	1/1:4,11:15:14.60:274,15,0	1/1:7,11:18:8.90:221,9,0	1/1:6,8:13:9:83,9,0	0/0:5,0:5:11.92:0,12,88	0/0:9,0:9:20.63:0,21,143	0/0:12,0:12:29.78:0,30,218	1/1:7,12:19:8.14:239,8,0	1/1:5,9:16:15.96:227,16,0	1/1:2,12:14:5.14:212,5,0	0/1:4,5:9:9.18:63,0,9
chr10	55652049	.	ATT	A	7855.78	PASS	AB=0.917;AC=31;AF=0.554;AN=56;BaseQRankSum=-11.023;DP=599;FS=1.078;HRun=11;HaplotypeScore=91.1234;InbreedingCoeff=0.9243;MQ=74.25;MQ0=2;MQRankSum=-3.404;QD=23.31;ReadPosRankSum=0.285;VQSLOD=4.6304;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:3,0:42:84.09:0,84,810	1/1:0,6:6:18.05:192,18,0	0/0:14,0:16:29.23:0,29,303	0/0:14,0:15:19.33:0,19,253	0/0:4,0:22:57.06:0,57,563	1/1:2,8:10:18.04:192,18,0	1/1:1,19:20:51.12:543,51,0	1/1:4,26:30:78.17:822,78,0	1/1:2,20:22:57.13:607,57,0	1/1:4,16:20:48.08:502,48,0	1/1:2,10:12:27.03:285,27,0	0/0:2,0:19:42.02:0,42,390	0/0:14,0:14:36.12:0,36,554	0/0:20,0:20:51.15:0,51,759	1/1:4,24:28:63.15:671,63,0	0/1:4,2:22:18.79:19,0,328	0/0:5,0:36:78.13:0,78,747	0/0:1,0:18:45.07:0,45,431	1/1:4,12:17:38.81:387,39,0	1/1:5,31:36:81.06:846,81,0	1/1:1,30:31:71.23:765,71,0	0/0:1,0:21:54.06:0,54,528	0/0:1,0:17:45.08:0,45,448	0/0:2,0:22:57.09:0,57,555	1/1:3,22:26:62.86:649,63,0	1/1:1,18:20:53.84:547,54,0	1/1:3,24:26:60.12:639,60,0	1/1:3,7:9:18.02:192,18,0
chr10	55652387	.	A	ACCCAAG	31729.08	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=4.649;DP=779;FS=0.000;HRun=0;HaplotypeScore=178.8503;InbreedingCoeff=0.9792;MQ=71.16;MQ0=0;MQRankSum=-19.996;QD=77.58;ReadPosRankSum=-6.128;VQSLOD=3.7701;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,160,3733	1/1:2,7:9:24.08:810,24,0	0/0:16,0:16:47.95:0,48,1057	0/0:19,0:19:4.15:0,4,1013	0/0:23,0:23:66.21:0,66,1539	1/1:5,9:17:42.14:1292,42,0	1/1:10,33:45:99:3450,105,0	1/1:13,27:46:99:4027,129,0	1/1:8,23:35:87.30:3015,87,0	1/1:7,17:28:75.21:2469,75,0	1/1:6,7:14:23.99:629,24,0	0/0:32,0:32:93.31:0,93,2177	0/0:31,0:31:90.31:0,90,2111	0/0:26,0:26:75.24:0,75,1755	1/1:13,16:30:72.19:2186,72,0	0/0:33,0:33:99:0,99,2299	0/0:29,0:29:78.27:0,78,1874	0/0:27,0:27:75.20:0,75,1690	1/1:13,7:24:66.19:1994,66,0	1/1:7,12:22:57.19:1512,57,0	1/1:13,24:44:68.73:1996,69,0	0/0:27,0:27:81.27:0,81,1901	0/0:17,0:17:39.12:0,39,866	0/0:35,0:35:99:0,99,2367	1/1:4,23:28:78.20:2553,78,0	1/1:6,31:38:99:3687,108,0	1/1:5,10:18:42.14:1337,42,0	1/1:2,7:11:24.01:772,24,0
chr10	55655949	.	A	ACAGCAG	5134.58	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=12.190;DP=547;FS=0.000;HRun=0;HaplotypeScore=145.9993;InbreedingCoeff=0.8901;MQ=82.59;MQ0=2;MQRankSum=-3.477;QD=21.94;ReadPosRankSum=-0.234;VQSLOD=4.0790;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:51.08:0,51,705	1/1:6,0:6:9.03:139,9,0	0/0:34,0:31:32.06:0,32,608	0/0:38,0:34:32.41:0,32,518	0/0:15,0:15:18.02:0,18,205	1/1:19,0:17:30.07:436,30,0	1/1:27,0:27:45.07:690,45,0	1/1:15,0:15:11.67:190,12,0	1/1:12,13:25:20.81:527,21,0	1/1:8,0:8:6:71,6,0	0/1:4,0:4:0:0,0,0	0/0:14,0:14:39.08:0,39,748	0/0:24,0:24:60.20:0,60,1204	0/0:18,0:18:39.12:0,39,741	1/1:28,0:28:62.89:992,63,0	0/0:25,0:25:51.17:0,51,1037	0/0:31,0:31:69.20:0,69,1312	0/0:20,0:20:28.62:0,29,746	1/1:18,0:18:26.88:328,27,0	1/1:8,0:8:3.01:52,3,0	1/1:22,0:20:11.64:147,12,0	0/0:11,0:11:21.01:0,21,258	0/0:8,0:8:15.02:0,15,181	0/0:46,0:46:99:0,105,2066	1/1:15,0:15:12.04:200,12,0	1/1:10,0:10:9.29:147,9,0	1/1:27,0:27:60.10:1054,60,0	1/1:2,0:2:6.02:162,6,0
chr10	55655964	.	GCAA	G	1816.44	PASS	AB=0.827;AC=21;AF=0.375;AN=56;BaseQRankSum=13.673;DP=550;FS=12.595;HRun=0;HaplotypeScore=99.7382;InbreedingCoeff=0.3317;MQ=61.93;MQ0=5;MQRankSum=-1.759;QD=7.29;ReadPosRankSum=-4.415;VQSLOD=0.3642;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:62.89:0,63,598	1/1:7,0:7:10.29:71,10,0	0/0:27,0:22:30.90:0,31,482	0/0:35,0:26:7.62:0,8,338	0/0:15,0:15:26.95:0,27,237	1/1:21,0:19:24.10:248,24,0	1/1:37,0:36:40.30:285,40,0	0/1:7,7:14:55.80:93,0,56	0/1:24,0:25:26.96:118,0,27	0/1:2,6:8:3.10:40,0,3	1/1:4,0:3:3:25,3,0	0/0:17,0:17:51.08:0,51,927	0/0:25,0:25:75.17:0,75,1302	0/0:19,0:19:54.11:0,54,881	1/1:32,0:32:50.33:391,50,0	0/0:21,0:21:45.81:0,46,1018	0/0:29,0:29:84.17:0,84,1572	0/0:18,0:19:15.65:0,16,771	0/1:10,11:20:85.54:130,0,86	0/1:4,0:4:3.86:19,0,4	0/1:27,0:25:16.58:91,0,17	0/0:12,0:11:20.94:0,21,184	0/0:6,0:6:18:0,18,160	0/0:46,0:46:96.76:0,97,2182	1/1:10,0:10:14.95:119,15,0	0/1:2,9:11:8.11:100,0,8	0/1:25,0:25:77.25:256,0,77	0/1:3,0:3:18.98:19,0,22
chr10	55655991	.	G	GCAA	3060.37	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=3.764;DP=561;FS=3.997;HRun=0;HaplotypeScore=96.8471;InbreedingCoeff=0.9596;MQ=69.70;MQ0=3;MQRankSum=-5.150;QD=13.08;ReadPosRankSum=-3.330;VQSLOD=2.8315;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:46.22:0,46,486	0/0:7,0:7:11.90:0,12,93	0/0:30,0:27:63.92:0,64,695	0/0:24,0:18:41.27:0,41,385	0/0:18,0:18:47.17:0,47,460	1/1:18,0:16:35.89:293,36,0	1/1:12,29:40:0.57:1,1,0	0/0:12,0:12:27.02:0,27,246	1/1:26,0:26:47.77:401,48,0	1/1:7,0:7:18.02:170,18,0	1/1:9,0:9:21.02:194,21,0	0/0:20,0:20:57.11:0,57,744	0/0:31,0:31:84.15:0,84,1090	0/0:19,0:19:53.32:0,53,681	1/1:32,0:32:56.72:442,57,0	0/0:23,0:23:60.15:0,60,815	0/0:30,0:30:90.21:0,90,1226	0/0:12,0:12:33.11:0,33,502	1/1:16,0:16:32.96:284,33,0	1/1:4,0:4:11.99:102,12,0	1/1:30,0:29:52.06:461,52,0	0/0:15,0:15:35.47:0,35,295	0/0:15,0:15:41.91:0,42,361	0/0:48,0:48:99:0,129,1750	1/1:9,0:9:19.25:163,19,0	1/1:10,0:10:27.01:244,27,0	1/1:26,0:26:53.73:425,54,0	1/1:6,0:6:12:104,12,0
chr10	55657263	.	CGTTT	C	2245.07	PASS	AB=0.947;AC=27;AF=0.482;AN=56;BaseQRankSum=0.297;DP=440;FS=3.968;HRun=0;HaplotypeScore=87.2211;InbreedingCoeff=0.6476;MQ=70.09;MQ0=10;MQRankSum=1.128;QD=10.11;ReadPosRankSum=-0.238;VQSLOD=2.6341;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:26:66.07:0,66,1020	1/1:0,0:6:5.77:55,6,0	0/0:32,0:18:44.67:0,45,385	0/1:20,0:11:2.87:3,0,149	0/0:12,0:12:27.05:0,27,386	0/0:24,0:24:0.01:0,0,37	1/1:6,0:6:0.94:2,1,0	1/1:28,0:27:77.97:687,78,0	1/1:12,1:13:5.37:63,5,0	1/1:13,0:12:15.46:121,15,0	1/1:12,1:13:5.31:62,5,0	0/0:10,0:10:21.04:0,21,317	0/0:7,0:7:21.02:0,21,340	0/0:9,0:9:27.06:0,27,528	1/1:11,2:13:8.85:122,9,0	0/0:14,0:13:39.07:0,39,576	0/0:32,0:32:76.01:0,76,771	0/0:18,0:17:50.12:0,50,614	1/1:17,2:19:48.03:456,48,0	1/1:9,1:11:6.49:97,6,0	1/1:27,1:28:5.84:64,6,0	0/0:8,0:8:18.01:0,18,296	0/0:10,0:10:24.04:0,24,369	0/0:15,0:15:39.01:0,39,535	0/1:10,0:10:73.93:74,0,201	1/1:5,9:15:9.11:308,9,0	0/1:13,3:16:75.15:160,0,75	1/1:8,2:11:13.59:169,14,0
chr10	55657264	.	GTT	G	4012.02	PASS	AB=0.867;AC=29;AF=0.518;AN=56;BaseQRankSum=-1.070;DP=430;FS=3.326;HRun=3;HaplotypeScore=67.7756;InbreedingCoeff=0.7084;MQ=67.18;MQ0=10;MQRankSum=1.225;QD=16.86;ReadPosRankSum=0.037;VQSLOD=0.8537;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:25:66.05:0,66,761	1/1:6,0:6:5.75:41,6,0	0/0:30,0:16:44.68:0,45,385	0/1:19,0:10:2.87:3,0,149	0/0:12,0:12:30.01:0,30,332	1/1:1,23:24:0.21:210,0,0	1/1:0,6:6:6.02:91,6,0	1/1:27,0:26:77.97:687,78,0	1/1:1,12:13:27.08:387,27,0	1/1:2,10:11:29.79:299,30,0	1/1:1,12:13:15.04:207,15,0	0/0:9,0:9:21.03:0,21,240	0/0:7,0:7:2.65:0,3,200	0/0:10,0:10:27.05:0,27,384	1/1:3,10:13:24.05:324,24,0	0/0:14,0:13:38.95:0,39,390	0/0:32,0:32:69.16:0,69,613	0/0:19,0:18:49.87:0,50,414	1/1:16,1:17:50.55:435,51,0	1/1:2,9:11:9:95,9,0	1/1:2,25:27:21.06:298,21,0	0/0:7,0:7:15.86:0,16,153	0/0:11,0:11:27.04:0,27,299	0/0:15,0:15:39.01:0,39,407	0/1:10,0:10:60.12:116,0,60	1/1:12,2:14:35.64:329,36,0	0/1:5,10:15:15.71:187,0,16	1/1:3,8:11:24.04:302,24,0
chr10	55657266	.	T	TTG	1360.66	PASS	AB=0.788;AC=13;AF=0.260;AN=50;BaseQRankSum=-3.994;DP=458;FS=7.656;HRun=0;HaplotypeScore=89.4265;InbreedingCoeff=0.3821;MQ=65.99;MQ0=10;MQRankSum=0.016;QD=8.40;ReadPosRankSum=-1.084;VQSLOD=2.2207;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:24,6:29:99:151,0,115	0/0:6,0:6:2.84:0,3,14	./.	./.	0/1:8,2:10:46.64:76,0,47	0/0:24,0:24:13.69:0,14,61	0/0:6,0:6:5.49:0,5,24	./.	0/0:13,0:13:24.70:0,25,109	0/0:17,0:16:5.15:0,5,24	0/0:14,0:14:13.87:0,14,63	0/1:8,2:10:24.96:79,0,25	0/0:6,0:8:17.70:0,18,150	0/0:10,0:10:18.03:0,18,182	0/0:12,0:12:22.15:0,22,100	1/1:8,5:13:18.06:266,18,0	1/1:20,1:37:19.02:190,19,0	1/1:21,0:20:23.97:227,24,0	0/0:17,0:17:8.43:0,8,40	0/0:11,0:11:8.43:0,8,40	0/0:31,0:31:17.38:0,17,76	1/1:2,4:9:12.04:178,12,0	0/1:8,5:14:46.74:160,0,47	0/1:11,6:17:14.34:199,0,14	0/0:11,0:11:14.41:0,14,90	0/0:16,0:16:16.52:0,17,78	0/0:15,0:15:22.65:0,23,120	0/0:11,0:11:22.25:0,22,103
chr10	55658021	.	A	AC	1973.44	PASS	AB=0.920;AC=17;AF=0.304;AN=56;BaseQRankSum=16.460;DP=994;FS=167.652;HRun=1;HaplotypeScore=397.3158;InbreedingCoeff=-0.4414;MQ=40.62;MQ0=11;MQRankSum=-14.097;QD=3.26;ReadPosRankSum=1.402;VQSLOD=-0.1153;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,1:32:15.22:0,15,741	0/0:19,0:21:17.51:0,18,469	0/0:43,0:9:20.98:0,21,236	0/0:44,0:18:50.89:0,51,615	0/1:28,2:31:76.10:76,0,461	0/1:15,1:16:40.83:41,0,209	0/0:39,0:40:44.74:0,45,881	0/1:52,0:47:99:140,0,995	0/1:31,2:32:99:164,0,600	0/1:46,7:56:99:429,0,850	0/1:19,5:27:84.47:84,0,280	0/1:54,1:56:92.90:93,0,1241	0/1:41,4:45:99:242,0,863	0/0:31,1:32:15.13:0,15,781	0/1:33,1:34:50.64:51,0,411	0/1:37,1:38:72.13:72,0,754	0/0:23,0:23:50.53:0,51,617	0/0:18,0:18:21.44:0,21,413	0/0:20,0:14:9.13:0,9,347	0/1:22,5:27:99:169,0,373	0/0:80,0:78:99:0,162,2169	0/1:35,4:40:99:146,0,555	0/1:25,2:27:45.95:46,0,360	0/0:34,1:34:56.10:0,56,739	0/1:36,2:39:75.06:75,0,515	0/1:45,2:48:99:141,0,1129	0/1:22,0:23:66.11:66,0,397	0/1:3,2:5:18.18:99,0,18
chr10	55658092	.	ATG	A	653.65	PASS	AB=0.861;AC=8;AF=0.143;AN=56;BaseQRankSum=12.567;DP=1191;FS=60.169;HRun=0;HaplotypeScore=380.7109;InbreedingCoeff=-0.1736;MQ=50.05;MQ0=17;MQRankSum=-10.107;QD=2.44;ReadPosRankSum=0.241;VQSLOD=0.1780;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:98:0,98,1919	0/1:21,2:23:15.46:15,0,951	0/0:52,0:16:34.71:0,35,664	0/0:47,0:16:29.66:0,30,656	0/0:29,0:29:9.95:0,10,1103	0/0:22,0:21:42.14:0,42,852	0/0:45,0:44:76.91:0,77,1894	0/0:43,0:40:99:0,117,2285	0/0:46,0:45:99:0,102,2017	0/1:50,9:59:99:228,0,2526	0/1:18,8:26:99:143,0,621	0/0:55,0:55:99:0,132,2568	0/0:46,0:46:99:0,103,2010	0/0:34,0:34:68.98:0,69,1381	0/0:40,0:39:72.14:0,72,1393	0/0:38,0:38:93.29:0,93,1884	0/0:44,0:44:99:0,108,2198	0/0:20,0:20:57.20:0,57,1131	0/0:24,0:23:57.05:0,57,1147	0/1:28,7:35:45.23:45,0,1453	0/0:175,0:174:99:0,369,7168	0/1:40,2:42:99:99,0,941	0/1:27,2:29:36.01:36,0,818	0/0:51,0:51:99:0,108,2113	0/1:32,7:40:87.60:88,0,1172	0/0:44,1:45:48.49:0,48,1974	0/0:23,2:25:5.52:0,6,897	0/1:10,4:14:99:135,0,563
chr10	55658113	.	CCA	C	1019.15	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=1.446;DP=1176;FS=10.245;HRun=0;HaplotypeScore=323.5252;InbreedingCoeff=0.9548;MQ=49.04;MQ0=29;MQRankSum=-0.955;QD=16.99;ReadPosRankSum=-0.898;VQSLOD=2.2988;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:40:48.12:0,48,1222	1/1:8,10:18:25.09:368,25,0	0/0:63,0:10:10.67:0,11,172	0/0:56,0:14:10.02:0,10,148	0/0:27,0:27:40.95:0,41,642	0/0:22,0:21:51.17:0,51,786	0/0:56,0:57:99:0,121,1977	1/1:24,18:37:50.87:772,51,0	0/0:47,1:47:99:0,120,1869	0/0:59,0:58:99:0,126,1977	0/0:29,0:29:38.39:0,38,546	0/0:48,0:48:99:0,105,1626	0/0:32,0:32:75.18:0,75,1168	0/0:43,0:43:90.29:0,90,1446	0/0:32,0:32:54.18:0,54,891	0/0:36,1:37:84.27:0,84,1336	0/0:46,2:48:71.79:0,72,1599	0/0:18,0:18:45.13:0,45,713	0/0:26,0:19:39.13:0,39,627	0/0:33,0:33:79.68:0,80,1172	0/0:159,0:170:99:0,319,5055	0/0:31,0:33:44.16:0,44,678	0/0:25,0:25:39.04:0,39,583	0/0:55,0:55:99:0,111,1777	0/0:35,0:36:55.30:0,55,756	0/0:43,0:43:92.08:0,92,1532	0/0:20,0:20:45.11:0,45,710	0/0:13,0:13:28.95:0,29,413
chr10	55658140	.	CCA	C	10763.12	PASS	AB=0.933;AC=28;AF=0.500;AN=56;BaseQRankSum=9.909;DP=1066;FS=8.193;HRun=0;HaplotypeScore=225.7041;InbreedingCoeff=0.8244;MQ=49.46;MQ0=31;MQRankSum=0.214;QD=19.57;ReadPosRankSum=2.396;VQSLOD=3.8525;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:76.80:0,77,1206	0/0:14,1:15:34.90:0,35,529	0/0:70,0:2:6.02:0,6,91	0/0:72,0:16:5.67:0,6,227	0/1:22,1:23:5.10:5,0,437	1/1:4,16:19:33.36:402,33,0	1/1:12,33:45:93.30:1184,93,0	0/0:40,0:37:75.60:0,76,1234	1/1:9,37:45:78.09:975,78,0	1/1:16,26:42:89.87:1106,90,0	1/1:3,16:20:17.49:261,17,0	0/0:47,0:48:99:0,111,1806	0/0:28,0:28:60.17:0,60,949	0/0:46,0:46:90.23:0,90,1408	1/1:9,21:29:51.04:611,51,0	0/1:35,4:39:61.40:61,0,1099	0/0:40,0:40:83.76:0,84,1382	0/0:18,0:18:5.57:0,6,616	1/1:8,7:13:14.79:265,15,0	1/1:7,16:23:48.10:597,48,0	1/1:58,100:153:99:3241,261,0	0/0:21,0:23:40.48:0,40,631	0/0:21,0:20:23.95:0,24,386	0/0:60,1:61:85.74:0,86,2069	1/1:9,14:23:22.78:390,23,0	1/1:12,23:35:80.68:954,81,0	1/1:2,14:16:36.12:458,36,0	1/1:4,5:12:24.65:252,25,0
chr10	55658197	.	G	GCA	13293.06	PASS	AB=0.630;AC=26;AF=0.464;AN=56;BaseQRankSum=9.946;DP=956;FS=12.802;HRun=0;HaplotypeScore=183.8426;InbreedingCoeff=0.6785;MQ=52.72;MQ0=68;MQRankSum=1.190;QD=26.80;ReadPosRankSum=0.125;VQSLOD=5.3364;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:77.76:0,78,949	1/1:1,12:14:27.09:451,27,0	0/0:48,0:6:15:0,15,157	0/0:56,0:6:2.49:0,2,66	0/0:17,0:17:27.09:0,27,343	1/1:11,6:17:36:570,36,0	0/1:14,22:36:99:967,0,203	1/1:14,28:32:43:1151,43,0	1/1:12,19:31:69.11:1090,69,0	0/1:12,20:28:69.32:938,0,69	1/1:5,11:16:15.05:251,15,0	0/0:41,0:40:99:0,105,1288	0/0:32,0:32:75.20:0,75,936	0/0:33,0:32:63.19:0,63,802	1/1:12,21:31:24.94:957,25,0	0/0:34,0:33:78.25:0,78,990	0/0:35,0:35:81.11:0,81,948	0/0:28,0:28:43.92:0,44,873	1/1:14,8:13:30.09:473,30,0	1/1:6,10:15:21.05:325,21,0	0/1:82,75:153:45.34:3473,0,45	0/0:15,0:13:15.05:0,15,191	0/0:15,0:15:20.84:0,21,267	0/0:70,1:71:99:0,156,1942	1/1:8,12:20:33.11:552,33,0	0/1:13,24:35:97.13:1250,0,97	1/1:6,7:12:30.10:495,30,0	1/1:0,7:8:21.07:351,21,0
chr10	55659273	.	AATTT	A	151.44	PASS	AC=2;AF=0.048;AN=42;BaseQRankSum=3.816;DP=262;FS=3.756;HRun=0;HaplotypeScore=44.8218;InbreedingCoeff=0.4826;MQ=66.10;MQ0=3;MQRankSum=-1.819;QD=5.82;ReadPosRankSum=-2.983;VQSLOD=0.6352;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:11:11.07:0,11,188	0/0:7,0:7:15.05:0,15,357	./.	./.	0/0:10,0:10:15.04:0,15,310	0/0:14,0:13:21.07:0,21,492	0/0:6,0:6:6.02:0,6,134	1/1:15,11:18:18.05:239,18,0	0/0:10,0:10:18.06:0,18,419	0/0:11,0:11:18.06:0,18,427	0/0:6,0:6:9.03:0,9,214	0/0:8,0:8:15.05:0,15,357	0/0:9,0:9:15.05:0,15,350	./.	0/0:4,0:4:6.02:0,6,143	./.	0/0:24,0:24:51.17:0,51,1168	0/0:13,0:13:30.10:0,30,704	0/0:7,0:7:9.03:0,9,214	0/0:7,0:7:3.01:0,3,71	./.	./.	0/0:3,0:3:3.01:0,3,34	./.	0/0:9,0:9:18.06:0,18,428	0/0:6,0:6:6.02:0,6,111	0/0:15,0:15:24.08:0,24,571	0/0:18,0:18:42.13:0,42,884
chr10	55660190	.	CTCTTTCTTTCTTTCTT	C	5931.63	PASS	AB=0.589;AC=31;AF=0.596;AN=52;BaseQRankSum=4.971;DP=528;FS=0.000;HRun=0;HaplotypeScore=206.9206;InbreedingCoeff=0.6227;MQ=67.37;MQ0=4;MQRankSum=-2.351;QD=19.84;ReadPosRankSum=2.255;VQSLOD=3.6957;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:30:12.17:0,12,498	1/1:5,0:5:9.03:166,9,0	./.	./.	0/0:5,0:20:40.63:0,41,582	0/1:5,11:16:1.72:126,0,2	1/1:20,0:20:30.10:622,30,0	0/0:23,0:23:15.94:0,16,246	1/1:5,9:14:3.01:131,3,0	1/1:7,16:23:45.07:1064,45,0	1/1:3,7:9:6.02:161,6,0	0/1:6,0:23:61.29:98,0,61	0/0:24,0:24:54.17:0,54,3351	0/0:26,0:26:51.15:0,51,2858	1/1:3,13:16:12.04:525,12,0	0/0:21,0:21:45.15:0,45,2391	0/0:14,0:16:23.02:0,23,245	0/0:9,0:16:6.02:0,6,100	1/1:17,9:24:27.06:747,27,0	1/1:3,12:14:18.06:408,18,0	1/1:17,2:19:12.04:200,12,0	0/0:10,0:16:5.44:0,5,61	0/1:5,0:14:24.97:25,0,67	1/1:18,0:32:3.01:32,3,0	1/1:4,16:20:9.03:390,9,0	1/1:7,16:23:28.98:712,29,0	1/1:6,7:13:3.01:131,3,0	1/1:4,5:9:9.03:394,9,0
chr10	55661661	.	T	TAATA	22184.88	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-11.701;DP=640;FS=1.709;HRun=0;HaplotypeScore=105.3283;InbreedingCoeff=0.9996;MQ=78.63;MQ0=0;MQRankSum=-10.420;QD=65.83;ReadPosRankSum=-1.247;VQSLOD=6.5329;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,117,2263	1/1:3,7:10:24.08:635,24,0	0/0:21,0:21:60.20:0,60,1130	0/0:17,0:17:41.18:0,41,699	0/0:28,0:28:84.29:0,84,1617	1/1:1,21:22:57.20:1534,57,0	1/1:2,24:26:69.24:1840,69,0	1/1:3,21:25:69.24:1879,69,0	1/1:3,17:21:51.18:1354,51,0	1/1:1,22:24:72.25:1932,72,0	1/1:3,14:18:45.15:1120,45,0	0/0:21,0:21:60.19:0,60,1128	0/0:11,0:11:33.11:0,33,639	0/0:16,0:16:48.15:0,48,889	1/1:2,16:19:39.13:1003,39,0	0/0:16,0:16:45.15:0,45,827	0/0:32,0:32:87.30:0,87,1655	0/0:26,0:25:78.21:0,78,1435	1/1:1,13:16:45.10:1036,45,0	1/1:2,15:19:51.10:1169,51,0	1/1:7,37:45:99:2665,102,0	0/0:21,0:21:45.14:0,45,839	0/0:16,0:16:48.16:0,48,914	0/0:39,0:39:99:0,114,2175	1/1:3,12:15:36.12:934,36,0	1/1:6,19:25:69.24:1801,69,0	1/1:4,22:30:84.29:2208,84,0	1/1:2,13:19:42.14:1076,42,0
chr10	55661830	.	A	ACTGT	23485.64	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-10.760;DP=707;FS=5.938;HRun=0;HaplotypeScore=112.0930;InbreedingCoeff=0.9980;MQ=73.48;MQ0=0;MQRankSum=-8.426;QD=65.06;ReadPosRankSum=-0.664;VQSLOD=6.9150;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,123,2323	1/1:3,8:11:26.59:682,27,0	0/0:19,0:19:51.16:0,51,902	0/0:24,0:24:49.95:0,50,998	0/0:19,0:19:51.17:0,51,967	1/1:0,18:20:51.18:1365,51,0	1/1:3,21:25:66.22:1737,66,0	1/1:13,31:44:99:2880,114,0	1/1:3,19:23:60.21:1608,60,0	1/1:4,28:32:87.28:2224,87,0	1/1:2,7:9:21.07:540,21,0	0/0:33,0:33:93.32:0,93,1749	0/0:20,0:20:57.17:0,57,1019	0/0:26,0:26:78.23:0,78,1377	1/1:2,22:24:66.23:1777,66,0	0/0:22,0:22:63.22:0,63,1196	0/0:46,0:46:99:0,135,2518	0/0:22,0:22:66.20:0,66,1209	1/1:4,11:16:39.13:1020,39,0	1/1:4,9:13:27.09:720,27,0	1/1:6,51:58:99:3324,126,0	0/0:20,0:20:57.16:0,57,1004	0/0:16,0:16:42.14:0,42,774	0/0:35,0:35:99:0,99,1787	1/1:2,17:20:39.13:1051,39,0	1/1:6,21:27:69.21:1734,69,0	1/1:3,27:31:87.30:2336,87,0	1/1:0,7:7:18.06:486,18,0
chr10	55663686	.	GAA	G	8829.79	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=8.879;DP=595;FS=1.090;HRun=11;HaplotypeScore=76.2315;InbreedingCoeff=0.9920;MQ=62.47;MQ0=3;MQRankSum=1.819;QD=25.45;ReadPosRankSum=1.678;VQSLOD=4.9794;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:31:75.25:0,75,1146	1/1:1,6:7:12.02:128,12,0	0/0:12,0:10:20.10:0,20,283	0/0:13,0:12:17.98:0,18,215	0/0:25,0:25:66.21:0,66,976	1/1:1,20:21:45.11:479,45,0	1/1:0,9:9:20.73:223,21,0	1/1:5,38:44:99:1155,105,0	1/1:1,14:15:42.10:447,42,0	1/1:5,24:29:72.14:752,72,0	1/1:1,19:20:51.10:543,51,0	0/0:30,0:30:66.22:0,66,991	0/0:14,0:15:36.12:0,36,534	0/0:14,0:14:27.09:0,27,416	1/1:1,29:30:66.09:702,66,0	0/0:16,0:17:48.16:0,48,731	0/0:17,0:18:38.57:0,39,537	0/0:11,0:15:35:0,35,373	1/1:1,21:22:54.04:609,54,0	1/1:2,30:32:84.18:894,84,0	1/1:1,15:15:36.09:383,36,0	0/0:24,0:25:69.22:0,69,1020	0/0:19,0:20:42.14:0,42,629	0/0:10,0:10:18.06:0,18,275	1/1:2,20:21:54.13:575,54,0	1/1:9,22:30:60.10:632,60,0	1/1:7,30:36:90.20:958,90,0	1/1:0,11:11:33.08:351,33,0
chr10	55664826	.	G	GT	1620.76	PASS	AB=0.917;AC=22;AF=0.393;AN=56;BaseQRankSum=14.421;DP=583;FS=10.194;HRun=8;HaplotypeScore=109.6434;InbreedingCoeff=0.8228;MQ=70.22;MQ0=3;MQRankSum=-9.783;QD=7.27;ReadPosRankSum=-0.532;VQSLOD=0.5194;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:90.01:0,90,811	0/0:17,0:17:35.88:0,36,199	0/0:36,0:29:51.61:0,52,555	0/0:19,0:17:37.69:0,38,300	0/0:37,1:38:70.44:0,70,899	1/1:24,0:24:31.38:210,31,0	1/1:21,0:21:21.30:118,21,0	0/0:29,0:29:3.13:0,3,16	1/1:17,1:18:17.21:104,17,0	1/1:18,0:19:25.97:168,26,0	1/1:16,0:17:38.94:235,39,0	0/0:19,0:19:54.03:0,54,494	0/0:17,0:17:42.02:0,42,384	0/0:15,0:15:38.05:0,38,336	1/1:29,0:30:42.91:200,43,0	0/0:22,0:22:63.03:0,63,576	0/0:28,0:28:73.26:0,73,668	0/0:20,0:20:44.99:0,45,407	0/1:11,0:11:6.49:45,0,6	1/1:17,0:18:28.25:177,28,0	0/1:8,2:10:9.08:63,0,9	0/0:15,0:15:33.01:0,33,302	0/0:20,0:20:50.99:0,51,459	0/0:21,0:21:57.03:0,57,522	0/0:10,0:8:2.84:0,3,14	1/1:21,0:21:40.14:277,40,0	1/1:18,0:21:25.36:127,25,0	1/1:12,0:12:22.76:113,23,0
chr10	55664831	.	T	TTTTTTTTTTG	13895.03	PASS	AB=0.768;AC=26;AF=0.464;AN=56;BaseQRankSum=-3.529;DP=650;FS=6.713;HRun=0;HaplotypeScore=180.6870;InbreedingCoeff=0.8992;MQ=67.28;MQ0=4;MQRankSum=-7.362;QD=42.89;ReadPosRankSum=-2.252;VQSLOD=3.8137;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:96.15:0,96,2187	0/0:17,0:17:39.29:0,39,871	0/0:40,0:30:66.90:0,67,1576	0/0:21,0:18:40.28:0,40,874	0/0:37,0:37:99:0,108,2767	1/1:4,2:28:50.70:1905,51,0	1/1:2,1:21:21.54:871,22,0	0/1:26,0:26:99:111,0,533	1/1:2,4:21:18.06:710,18,0	1/1:6,1:29:56.14:1293,56,0	1/1:3,0:27:37.06:1230,37,0	0/0:20,0:20:54.17:0,54,1410	0/0:15,0:15:45.14:0,45,1124	0/0:17,0:17:48.11:0,48,1099	1/1:7,0:38:48.16:1791,48,0	0/0:21,0:21:63.22:0,63,1677	0/0:30,0:30:79.98:0,80,1955	0/0:19,0:19:24.96:0,25,1180	1/1:4,0:16:35.32:811,35,0	1/1:2,0:26:39.03:1186,39,0	1/1:10,0:10:14.70:236,15,0	0/0:17,0:17:51.04:0,51,1012	0/0:20,0:20:54.11:0,54,1299	0/0:19,0:19:57.18:0,57,1575	0/1:2,0:13:0:0,0,0	1/1:1,0:28:72.13:1606,72,0	1/1:4,0:28:30.10:1180,30,0	1/1:0,0:10:24.08:966,24,0
chr10	55665391	.	ATTG	A	14043.60	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=13.647;DP=627;FS=7.590;HRun=0;HaplotypeScore=104.2008;InbreedingCoeff=0.9970;MQ=83.24;MQ0=0;MQRankSum=-7.866;QD=44.30;ReadPosRankSum=1.868;VQSLOD=6.3342;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,129,2946	1/1:0,8:8:21.03:337,21,0	0/0:27,0:24:72.22:0,72,1411	0/0:27,0:27:57.25:0,57,1288	0/0:20,0:20:60.19:0,60,1352	1/1:0,20:20:54.19:952,54,0	1/1:0,19:19:39.13:687,39,0	1/1:3,26:28:75.24:1270,75,0	1/1:0,16:16:45.15:794,45,0	1/1:0,27:27:81.26:1391,81,0	1/1:0,13:13:27.09:476,27,0	0/0:21,0:21:63.22:0,63,1489	0/0:17,0:17:51.18:0,51,1204	0/0:10,0:10:30.07:0,30,659	1/1:0,27:27:72.25:1270,72,0	0/0:21,0:21:63.21:0,63,1442	0/0:40,0:40:99:0,114,2615	0/0:12,0:12:36.12:0,36,851	1/1:0,23:23:69.24:1214,69,0	1/1:2,29:31:69.24:1202,69,0	1/1:3,31:34:69.07:1216,69,0	0/0:22,0:22:66.23:0,66,1527	0/0:18,0:18:54.19:0,54,1220	0/0:31,0:31:93.32:0,93,2170	1/1:0,20:20:48.16:846,48,0	1/1:1,15:16:45.14:750,45,0	1/1:0,29:29:78.27:1374,78,0	1/1:0,5:5:15.05:265,15,0
chr10	55665412	.	CT	C	588.08	PASS	AB=0.940;AC=7;AF=0.125;AN=56;BaseQRankSum=3.740;DP=623;FS=0.000;HRun=10;HaplotypeScore=116.9289;InbreedingCoeff=0.5693;MQ=73.79;MQ0=0;MQRankSum=-3.181;QD=6.76;ReadPosRankSum=-3.073;VQSLOD=1.2902;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,1:39:79.19:0,79,1078	1/1:1,9:10:20.98:182,21,0	0/0:21,1:17:6.90:0,7,267	0/1:21,2:21:2.05:2,0,196	0/0:27,1:29:48.96:0,49,735	0/0:23,0:24:60:0,60,645	0/0:22,0:23:56.99:0,57,610	1/1:11,21:31:17.37:518,17,0	0/0:23,0:23:66.17:0,66,722	0/0:26,0:26:60.13:0,60,651	0/0:11,0:11:21.06:0,21,232	0/0:21,0:21:54.09:0,54,569	0/1:15,2:18:4.14:4,0,390	0/0:14,0:14:33.08:0,33,358	0/0:29,0:29:66.35:0,66,811	0/0:22,0:22:60.16:0,60,664	0/0:36,0:36:99:0,99,1078	0/0:17,0:17:45.12:0,45,498	0/0:24,0:25:66.01:0,66,711	0/0:25,1:27:40.06:0,40,642	0/0:26,0:27:66.13:0,66,708	0/0:22,0:22:63.13:0,63,677	0/0:10,0:10:27.06:0,27,291	0/0:25,0:25:54.15:0,54,597	0/0:16,0:16:39.10:0,39,425	0/0:18,0:18:39.11:0,39,431	0/0:30,0:30:50.85:0,51,753	0/1:4,0:4:9.19:9,0,88
chr10	55665734	.	CCTTGAATTGTCGGCACCCAGA	C	1624.97	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.316;DP=578;FS=9.358;HRun=0;HaplotypeScore=304.7657;InbreedingCoeff=0.9751;MQ=75.04;MQ0=0;MQRankSum=-5.280;QD=85.52;ReadPosRankSum=1.017;VQSLOD=1.9094;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,105,9572	1/1:0,5:5:15.05:870,15,0	0/0:25,0:26:63.21:0,63,3278	0/0:19,0:18:41.73:0,42,2415	0/0:30,0:30:87.29:0,87,7195	0/0:15,0:15:36.11:0,36,2921	0/0:14,0:14:42.14:0,42,3947	1/1:9,5:14:15.05:870,15,0	0/0:19,0:19:54.19:0,54,4744	0/0:23,0:23:63.22:0,63,5061	0/0:17,0:17:42.14:0,42,3299	0/0:23,0:23:63.20:0,63,4988	0/0:13,0:13:39.13:0,39,3859	0/0:12,0:12:36.12:0,36,2974	0/0:21,0:21:57.20:0,57,5462	0/0:22,0:22:63.22:0,63,5834	0/0:31,0:31:90.31:0,90,8599	0/0:19,0:19:57.20:0,57,5512	0/0:21,0:21:45.15:0,45,3452	0/0:22,0:22:60.19:0,60,4621	0/0:46,0:46:99:0,132,11444	0/0:21,0:21:57.18:0,57,4581	0/0:19,0:19:54.19:0,54,4780	0/0:26,0:26:63.22:0,63,5422	0/0:21,0:21:60.21:0,60,5388	0/0:13,0:13:36.11:0,36,3255	0/0:23,0:23:66.23:0,66,5435	0/0:5,0:5:15.05:0,15,1452
chr10	55665795	.	AC	A	822.99	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.351;DP=548;FS=1.600;HRun=3;HaplotypeScore=57.8191;InbreedingCoeff=0.9892;MQ=85.80;MQ0=0;MQRankSum=-3.016;QD=27.43;ReadPosRankSum=-2.999;VQSLOD=2.1708;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:81.27:0,81,1163	1/1:0,6:6:15.05:186,15,0	0/0:23,0:24:69.20:0,69,961	0/0:41,0:40:89.80:0,90,1426	0/0:24,0:24:66.22:0,66,950	0/0:8,0:8:24.05:0,24,309	0/0:11,0:11:30.10:0,30,432	1/1:2,22:24:63.17:756,63,0	0/0:21,0:21:63.20:0,63,888	0/0:11,0:11:33.11:0,33,474	0/0:15,0:15:45.15:0,45,645	0/0:22,0:22:66.20:0,66,913	0/0:19,0:19:54.18:0,54,773	0/0:16,0:16:48.15:0,48,672	0/0:21,0:21:63.21:0,63,906	0/0:19,0:19:57.16:0,57,784	0/0:26,0:26:75.23:0,75,1058	0/0:15,0:15:45.15:0,45,648	0/0:23,0:23:69.23:0,69,990	0/0:17,0:17:51.16:0,51,716	0/0:31,0:31:93.31:0,93,1339	0/0:13,0:13:36.11:0,36,496	0/0:19,0:19:57.19:0,57,820	0/0:26,0:26:75.25:0,75,1080	0/0:17,0:17:48.16:0,48,689	0/0:19,0:19:54.16:0,54,741	0/0:23,0:23:66.22:0,66,949	0/0:9,0:9:24.08:0,24,345
chr10	55666425	.	T	TA	6763.23	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=2.827;DP=381;FS=2.307;HRun=1;HaplotypeScore=86.3952;InbreedingCoeff=0.9832;MQ=79.49;MQ0=0;MQRankSum=-5.970;QD=40.26;ReadPosRankSum=1.755;VQSLOD=5.4534;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:54.18:0,54,699	0/0:6,0:6:9.03:0,9,117	0/0:21,0:21:57.12:0,57,679	0/0:10,0:10:26.89:0,27,287	0/0:13,0:13:24.07:0,24,310	1/1:0,11:11:33.11:494,33,0	1/1:0,14:14:39.13:584,39,0	0/0:18,0:18:51.17:0,51,659	1/1:2,10:12:36.04:490,36,0	1/1:3,18:21:63.15:872,63,0	1/1:3,9:12:27.06:380,27,0	0/0:22,0:22:53.84:0,54,685	0/0:15,0:15:36.44:0,36,452	0/0:21,0:21:57.19:0,57,737	1/1:1,15:15:42.14:628,42,0	0/0:19,0:19:48.14:0,48,608	0/0:8,0:8:21.07:0,21,272	0/0:11,0:11:24.08:0,24,308	1/1:1,13:14:42.14:623,42,0	1/1:1,12:13:30.06:424,30,0	1/1:1,13:14:36.12:539,36,0	0/0:12,0:12:24.08:0,24,311	0/0:9,0:9:18.06:0,18,233	0/0:7,0:7:12.04:0,12,155	1/1:1,13:14:36.12:538,36,0	1/1:1,13:14:42.13:608,42,0	1/1:0,7:7:21.07:314,21,0	1/1:0,6:6:18.06:270,18,0
chr10	55668447	.	GA	G	564.65	PASS	AB=0.767;AC=23;AF=0.460;AN=50;BaseQRankSum=0.375;DP=355;FS=7.780;HRun=13;HaplotypeScore=67.1698;InbreedingCoeff=0.4633;MQ=32.84;MQ0=89;MQRankSum=-1.606;QD=3.79;ReadPosRankSum=5.289;VQSLOD=0.0890;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:24:44.90:0,45,350	./.	./.	./.	0/0:20,0:14:14.21:0,14,103	1/1:7,5:7:17.88:129,18,0	0/1:5,2:6:6.97:35,0,7	1/1:8,2:7:2.29:38,2,0	0/1:7,5:9:14.38:72,0,14	0/1:7,2:7:20.43:31,0,20	1/1:9,3:9:5.94:44,6,0	0/0:8,0:6:9.79:0,10,74	0/0:13,2:15:1.27:0,1,147	0/0:7,0:6:3:0,3,29	1/1:11,2:12:8.95:39,9,0	0/0:12,0:10:9.83:0,10,77	0/0:38,0:25:47.07:0,47,405	0/0:26,0:15:18.30:0,18,150	0/0:9,2:6:0:0,0,0	1/1:9,2:9:5.82:44,6,0	1/1:8,1:6:5.01:28,5,0	0/0:11,0:8:6.42:0,6,48	0/0:12,0:10:2.16:0,2,53	0/0:11,0:5:2.98:0,3,29	1/1:6,7:11:18.45:119,18,0	1/1:6,2:8:5.92:44,6,0	1/1:13,2:6:5.96:43,6,0	1/1:13,1:6:8.89:65,9,0
chr10	55668481	.	AAAAAAAAAAAG	A	1989.27	PASS	AB=0.990;AC=22;AF=0.393;AN=56;BaseQRankSum=2.727;DP=361;FS=59.501;HRun=0;HaplotypeScore=89.2635;InbreedingCoeff=0.4022;MQ=47.77;MQ0=67;MQRankSum=-1.098;QD=11.05;ReadPosRankSum=1.553;VQSLOD=-0.6440;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:24:56.03:0,56,1450	0/1:4,0:3:1.89:20,0,2	0/0:17,0:4:8.25:0,8,54	0/0:10,0:5:9.02:0,9,148	0/0:20,0:14:31.23:0,31,786	1/1:12,0:11:5.42:74,5,0	1/1:5,0:5:11.01:107,11,0	0/1:11,0:9:0.27:155,0,0	1/1:11,0:9:2.36:59,2,0	0/1:11,0:7:60.50:60,0,66	1/1:20,0:16:26.69:393,27,0	0/0:7,0:7:21.07:0,21,633	0/0:8,0:7:20.89:0,21,570	0/0:2,0:2:6.02:0,6,199	0/1:16,0:13:5.72:150,0,6	0/0:12,0:10:27.09:0,27,943	0/0:31,0:20:54.06:0,54,1491	0/0:21,0:12:32.46:0,32,850	1/1:12,5:17:1.99:266,2,0	1/1:15,0:13:14.69:243,15,0	0/1:6,0:5:0.78:47,0,1	0/0:4,0:3:9.01:0,9,235	0/0:10,0:8:24.08:0,24,838	0/0:10,0:6:11.30:0,11,121	1/1:16,0:14:17.18:280,17,0	0/1:10,1:10:16.25:210,0,16	0/1:16,0:8:23.33:73,0,23	0/1:9,0:3:12.28:34,0,12
chr10	55668482	.	AAAAAAAAAAG	A	2259.96	PASS	AB=1.000;AC=26;AF=0.464;AN=56;BaseQRankSum=1.819;DP=347;FS=49.614;HRun=0;HaplotypeScore=80.6795;InbreedingCoeff=0.5765;MQ=48.47;MQ0=64;MQRankSum=0.756;QD=13.53;ReadPosRankSum=1.266;VQSLOD=-0.1351;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:24:52.26:0,52,1241	0/1:4,0:3:0.45:21,0,0	0/0:17,0:4:2.77:0,3,36	0/0:10,0:5:8.94:0,9,144	0/0:20,0:14:30.54:0,31,675	1/1:6,5:10:5.51:91,6,0	1/1:5,0:5:11.98:149,12,0	1/1:11,0:9:16.86:221,17,0	1/1:7,4:9:2.88:71,3,0	0/1:9,0:6:41.69:53,0,42	1/1:17,3:16:14.91:457,15,0	0/0:7,0:7:21.07:0,21,560	0/0:8,0:7:20.89:0,21,498	0/0:2,0:2:6.02:0,6,173	1/1:14,0:12:2.50:183,3,0	0/0:12,0:10:27.09:0,27,829	0/0:30,0:19:53.56:0,54,1303	0/0:21,0:12:31.96:0,32,740	1/1:16,0:16:17.67:263,18,0	1/1:9,5:13:14.98:245,15,0	0/1:6,0:5:3.78:33,0,4	0/0:4,0:3:9.01:0,9,219	0/0:10,0:8:24.08:0,24,747	0/0:10,0:6:10.74:0,11,116	1/1:10,1:10:17.88:275,18,0	1/1:10,1:10:1.56:246,2,0	0/1:15,0:7:12.31:89,0,12	1/1:9,0:3:2.80:54,3,0
chr10	55668605	.	GA	G	3144.31	PASS	AB=0.845;AC=31;AF=0.554;AN=56;BaseQRankSum=9.391;DP=361;FS=1.756;HRun=8;HaplotypeScore=47.3608;InbreedingCoeff=0.7824;MQ=55.39;MQ0=21;MQRankSum=-3.362;QD=14.62;ReadPosRankSum=1.726;VQSLOD=3.2831;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:21:31.28:0,31,348	0/1:4,1:4:8.48:75,0,8	0/1:7,1:5:5.22:5,0,62	0/1:10,0:7:1.07:1,0,13	0/0:25,0:25:57.12:0,57,659	1/1:10,4:13:30.01:280,30,0	1/1:9,1:5:15.02:145,15,0	1/1:11,9:15:30.02:283,30,0	1/1:8,2:10:15.02:144,15,0	1/1:10,8:15:33:309,33,0	1/1:17,8:23:42.06:404,42,0	0/0:11,0:11:27.08:0,27,326	0/0:6,0:6:9.03:0,9,109	0/0:5,0:5:12.04:0,12,145	1/1:10,1:11:20.86:188,21,0	0/0:4,0:4:12.04:0,12,145	0/0:22,0:21:45.14:0,45,538	0/0:26,0:24:54.17:0,54,651	1/1:12,3:10:12.81:141,13,0	1/1:12,3:14:24.04:232,24,0	1/1:6,0:5:12.02:116,12,0	0/0:4,0:4:3.01:0,3,36	0/0:7,0:6:12.04:0,12,145	0/0:13,0:12:33.09:0,33,384	1/1:11,0:11:30.05:290,30,0	1/1:9,2:9:21.88:195,22,0	1/1:10,4:13:33.05:318,33,0	1/1:6,3:9:24.04:232,24,0
chr10	55668620	.	G	GA	4517.80	PASS	AB=0.964;AC=32;AF=0.593;AN=54;BaseQRankSum=2.864;DP=385;FS=0.997;HRun=11;HaplotypeScore=52.7884;InbreedingCoeff=0.8138;MQ=65.16;MQ0=13;MQRankSum=-1.866;QD=17.79;ReadPosRankSum=-1.152;VQSLOD=5.3856;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:44.82:0,45,347	1/1:6,0:5:14.05:123,14,0	0/1:12,1:7:1.02:1,0,80	0/1:20,0:12:15.02:17,0,15	0/0:18,0:19:10.53:0,11,254	1/1:13,2:14:7.14:250,7,0	1/1:8,4:8:21.04:213,21,0	1/1:4,18:21:56.92:546,57,0	1/1:9,3:12:21.04:212,21,0	1/1:17,6:20:27.05:274,27,0	1/1:16,5:20:45.07:447,45,0	0/0:12,0:12:29.88:0,30,232	0/0:3,0:3:8.96:0,9,69	0/0:5,0:5:11.94:0,12,90	1/1:10,5:15:15.87:313,16,0	0/0:7,0:7:17.93:0,18,139	0/0:16,1:19:12.48:0,12,260	0/0:20,0:21:54.88:0,55,406	1/1:13,5:16:27.78:287,28,0	1/1:10,3:13:30.04:294,30,0	1/1:5,0:4:9.02:91,9,0	./.	0/0:7,0:6:5.97:0,6,46	0/0:10,0:9:14.94:0,15,116	1/1:10,2:12:36.07:365,36,0	1/1:8,6:13:31.62:309,32,0	1/1:9,7:16:42.08:426,42,0	1/1:14,2:16:18.81:349,19,0
chr10	55668870	.	G	GA	5353.11	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-7.119;DP=563;FS=1.632;HRun=10;HaplotypeScore=64.4778;InbreedingCoeff=0.9483;MQ=78.30;MQ0=1;MQRankSum=-1.071;QD=19.90;ReadPosRankSum=-1.909;VQSLOD=5.0834;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,132,1077	1/1:3,5:8:15.04:159,15,0	0/0:27,0:24:13.53:0,14,239	0/0:17,0:12:3.42:0,3,43	0/0:29,0:30:70.92:0,71,569	1/1:4,17:24:19.97:370,20,0	1/1:5,16:21:24.06:254,24,0	1/1:8,18:26:51.12:537,51,0	1/1:4,12:16:11.45:327,11,0	1/1:6,7:13:24.02:244,24,0	1/1:1,15:16:33.16:393,33,0	0/0:23,0:23:43.04:0,43,408	0/0:17,0:17:38.93:0,39,317	0/0:17,0:17:41.92:0,42,342	1/1:1,17:18:48.12:512,48,0	0/0:15,0:17:46.80:0,47,358	0/0:24,1:25:33.91:0,34,481	0/0:17,0:17:38.90:0,39,315	1/1:8,15:23:48.11:503,48,0	1/1:2,10:13:29.93:292,30,0	1/1:2,15:17:33.55:351,34,0	0/0:12,0:12:32.95:0,33,269	0/0:13,0:13:35.95:0,36,296	0/0:25,0:25:62.91:0,63,517	1/1:2,11:13:24.06:256,24,0	1/1:6,18:24:54.09:554,54,0	1/1:6,25:31:13.57:541,14,0	1/1:1,4:5:6.02:64,6,0
chr10	55670848	.	A	AT	241.57	PASS	AB=0.823;AC=5;AF=0.089;AN=56;BaseQRankSum=-2.580;DP=474;FS=8.401;HRun=14;HaplotypeScore=64.2823;InbreedingCoeff=0.2872;MQ=60.86;MQ0=31;MQRankSum=-1.358;QD=4.93;ReadPosRankSum=-1.450;VQSLOD=1.2522;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:35.15:0,35,260	0/1:1,5:6:10.27:44,0,10	0/0:57,1:10:4.10:0,4,13	0/0:62,1:16:1.79:0,2,18	0/0:13,0:16:27.39:0,27,146	0/0:7,0:8:18.83:0,19,108	0/0:5,0:5:11.80:0,12,76	1/1:12,12:25:31.89:294,32,0	0/0:7,0:7:14.53:0,15,96	0/0:18,1:21:14.34:0,14,189	0/0:9,0:9:17.65:0,18,114	0/0:8,0:8:8.86:0,9,72	0/0:7,0:6:11.81:0,12,77	0/0:6,0:6:11.74:0,12,76	0/1:10,1:12:0.66:1,0,114	0/0:11,0:10:13.98:0,14,95	0/0:28,2:30:32.98:0,33,337	0/0:16,1:18:22.88:0,23,267	0/0:15,0:15:22.35:0,22,188	0/0:7,0:7:14.76:0,15,96	0/0:5,0:4:5.89:0,6,38	0/1:5,0:5:13.29:17,0,13	0/0:7,0:9:23.83:0,24,132	0/0:2,0:3:4.98:0,5,25	0/0:19,1:21:15.30:0,15,245	0/0:22,0:23:44.99:0,45,273	0/0:18,0:18:37.14:0,37,229	0/0:23,1:22:17.69:0,18,229
chr10	55670943	.	T	TA	6844.14	PASS	AB=1.000;AC=31;AF=0.554;AN=56;BaseQRankSum=-6.982;DP=371;FS=0.407;HRun=3;HaplotypeScore=37.7038;InbreedingCoeff=0.9191;MQ=60.07;MQ0=1;MQRankSum=1.044;QD=33.22;ReadPosRankSum=1.048;VQSLOD=4.5746;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:75.15:0,75,836	1/1:0,4:4:12.04:164,12,0	0/0:13,0:10:18.03:0,18,197	0/1:7,0:5:3.58:4,0,63	0/0:15,0:15:39.12:0,39,466	1/1:2,17:19:48.16:656,48,0	1/1:0,4:4:9.03:123,9,0	1/1:2,22:24:66.19:865,66,0	1/1:0,9:9:21.07:286,21,0	1/1:0,21:21:63.15:795,63,0	1/1:0,16:16:47.77:528,48,0	0/0:4,0:4:12.04:0,12,144	0/0:4,0:4:12.04:0,12,144	0/0:8,0:8:24.07:0,24,287	1/1:0,8:8:24.08:328,24,0	0/0:13,0:13:39.10:0,39,449	0/0:32,0:32:84.21:0,84,967	0/0:29,0:29:83.85:0,84,931	1/1:1,5:6:15.05:205,15,0	1/1:2,11:13:30.03:386,30,0	1/1:0,8:8:21.07:287,21,0	0/0:7,0:7:15.03:0,15,162	0/0:5,0:5:15.05:0,15,179	0/0:9,0:9:21.01:0,21,251	1/1:0,17:17:48.16:643,48,0	1/1:2,12:14:36.11:476,36,0	1/1:2,16:18:45.15:614,45,0	1/1:2,16:17:32.78:485,33,0
chr10	55671138	.	C	CTT	3082.91	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=13.030;DP=564;FS=1.857;HRun=7;HaplotypeScore=88.5282;InbreedingCoeff=0.9880;MQ=68.16;MQ0=0;MQRankSum=-2.884;QD=10.97;ReadPosRankSum=-0.202;VQSLOD=0.1678;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,126,1446	1/1:0,4:4:9.03:148,9,0	0/0:17,0:17:39.06:0,39,431	0/0:12,0:11:20.25:0,20,208	0/0:28,0:28:75.18:0,75,852	1/1:1,0:19:44.92:158,45,0	1/1:3,0:15:24.95:88,25,0	1/1:5,27:32:81.26:1299,81,0	1/1:3,0:16:29.94:105,30,0	1/1:1,0:20:47.41:167,47,0	1/1:1,0:15:32.44:114,32,0	0/0:14,0:14:30.08:0,30,349	0/0:15,0:15:42.12:0,42,489	0/0:20,0:20:57.16:0,57,653	1/1:1,0:17:34.93:123,35,0	0/0:23,0:23:66.19:0,66,769	0/0:41,0:41:99:0,114,1291	0/0:27,0:27:81.22:0,81,932	1/1:1,0:19:45.61:168,46,0	1/1:1,0:14:29.94:105,30,0	1/1:1,0:14:32.32:114,32,0	0/0:9,0:9:21.05:0,21,244	0/0:5,0:5:15.04:0,15,175	0/0:28,0:28:78.23:0,78,909	1/1:0,0:16:29.94:105,30,0	1/1:1,0:34:80.08:284,80,0	1/1:2,0:23:45.14:159,45,0	1/1:0,0:23:49.91:176,50,0
chr10	55673442	.	A	AGTTG	11035.95	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-16.579;DP=703;FS=18.963;HRun=0;HaplotypeScore=100.1997;InbreedingCoeff=0.9998;MQ=75.77;MQ0=0;MQRankSum=-2.158;QD=49.49;ReadPosRankSum=5.016;VQSLOD=4.3732;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,22:30:45.15:1142,45,0	0/0:11,0:11:30.10:0,30,521	0/0:22,0:22:56.76:0,57,850	0/0:24,0:24:49.55:0,50,698	1/1:5,25:30:72.09:1634,72,0	0/0:23,0:23:66.23:0,66,1146	0/0:28,0:28:69.22:0,69,1166	0/0:34,0:34:78.26:0,78,1330	0/0:24,0:24:66.19:0,66,1079	0/0:33,0:33:93.30:0,93,1567	0/0:18,0:18:45.07:0,45,718	1/1:5,31:36:78.27:1945,78,0	0/0:19,0:19:51.17:0,51,886	0/0:17,0:17:45.14:0,45,754	0/0:33,0:33:87.28:0,87,1482	0/0:26,0:26:66.19:0,66,1063	1/1:4,32:38:72.25:1826,72,0	1/1:3,19:23:33.11:837,33,0	0/0:16,0:16:42.11:0,42,622	0/0:20,0:20:45.14:0,45,755	0/0:38,0:38:99:0,102,1704	1/1:1,16:17:42.14:1066,42,0	1/1:3,22:25:48.16:1214,48,0	1/1:3,20:24:54.19:1371,54,0	0/0:12,0:12:36.12:0,36,622	0/0:41,0:41:99:0,108,1848	0/0:27,0:27:69.20:0,69,1122	0/0:14,0:14:42.14:0,42,730
chr10	55674497	.	C	CAGAG	22686.35	PASS	AB=0.952;AC=31;AF=0.554;AN=56;BaseQRankSum=-16.108;DP=674;FS=4.352;HRun=0;HaplotypeScore=98.5815;InbreedingCoeff=0.9272;MQ=75.33;MQ0=0;MQRankSum=-6.091;QD=62.84;ReadPosRankSum=-0.364;VQSLOD=6.5195;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,102,1936	1/1:0,19:19:54.19:1456,54,0	0/0:23,0:23:60.20:0,60,1099	0/0:22,0:22:66.18:0,66,1152	0/0:33,0:33:93.32:0,93,1740	1/1:2,20:22:57.20:1536,57,0	1/1:4,25:31:72.25:1942,72,0	1/1:10,21:33:84.27:2175,84,0	1/1:1,17:20:51.18:1369,51,0	1/1:4,15:19:51.18:1344,51,0	1/1:1,13:15:33.11:889,33,0	0/0:18,0:18:51.16:0,51,937	0/0:23,0:23:69.24:0,69,1310	0/0:28,0:28:84.29:0,84,1595	1/1:3,26:29:72.25:1940,72,0	0/1:19,1:20:20.58:21,0,1016	0/0:28,0:28:81.28:0,81,1531	0/0:21,0:21:57.20:0,57,1082	1/1:6,18:24:69.21:1688,69,0	1/1:1,15:16:42.14:1131,42,0	1/1:6,29:35:81.28:2176,81,0	0/0:16,0:16:48.16:0,48,910	0/0:26,0:26:72.25:0,72,1367	0/0:39,0:39:99:0,108,2009	1/1:2,16:18:48.16:1291,48,0	1/1:4,20:24:66.23:1708,66,0	1/1:2,22:28:57.19:1534,57,0	1/1:0,6:6:18.06:486,18,0
chr10	55674805	.	T	TAAA	9737.46	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=13.538;DP=494;FS=4.765;HRun=0;HaplotypeScore=80.4538;InbreedingCoeff=0.9930;MQ=65.42;MQ0=0;MQRankSum=-5.640;QD=40.74;ReadPosRankSum=0.730;VQSLOD=5.6656;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:93.26:0,93,1596	1/1:1,9:12:33.10:599,33,0	0/0:21,0:18:51.07:0,51,764	0/0:10,0:8:18.06:0,18,318	0/0:25,0:25:75.24:0,75,1357	1/1:0,13:16:36.12:661,36,0	1/1:1,10:13:24.03:468,24,0	1/1:2,15:22:58.22:977,58,0	1/1:1,9:14:22.89:442,23,0	1/1:0,12:15:37.27:643,37,0	1/1:0,13:14:31.28:501,31,0	0/0:16,0:16:48.16:0,48,869	0/0:12,0:12:36.12:0,36,671	0/0:15,0:15:45.15:0,45,824	1/1:6,11:20:44.01:785,44,0	0/0:17,0:17:51.15:0,51,891	0/0:17,0:17:51.16:0,51,906	0/0:23,0:23:69.18:0,69,1209	1/1:4,13:17:40.53:713,41,0	1/1:0,12:16:39.03:664,39,0	1/1:2,6:8:11.74:203,12,0	0/0:18,0:18:51.17:0,51,942	0/0:29,0:29:87.28:0,87,1567	0/0:19,0:19:57.20:0,57,1062	1/1:2,18:21:54.18:986,54,0	1/1:0,17:19:54.14:916,54,0	1/1:3,20:24:39.19:788,39,0	1/1:0,7:8:21.07:392,21,0
chr10	55675002	.	CT	C	2380.39	PASS	AB=0.832;AC=25;AF=0.446;AN=56;BaseQRankSum=7.633;DP=551;FS=15.999;HRun=13;HaplotypeScore=66.1369;InbreedingCoeff=0.4692;MQ=68.09;MQ0=0;MQRankSum=0.196;QD=8.27;ReadPosRankSum=2.999;VQSLOD=0.9628;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,16:26:5.81:283,6,0	1/1:4,0:11:12.21:35,12,0	0/1:20,1:16:6.22:6,0,71	0/1:5,0:4:15.05:15,0,35	1/1:6,18:25:23.51:327,24,0	0/0:20,2:24:6.23:0,6,397	0/0:14,0:14:36.04:0,36,344	1/1:12,0:31:36.60:106,37,0	0/0:21,2:25:12.92:0,13,412	0/1:17,4:22:18.08:18,0,293	0/0:16,0:17:29.19:0,29,306	1/1:3,14:18:31.67:225,32,0	0/0:11,2:13:11.15:0,11,261	0/0:19,1:20:29.15:0,29,435	0/0:22,3:27:27.96:0,28,564	1/1:0,18:19:49.63:356,50,0	1/1:5,15:22:45.79:318,46,0	1/1:3,14:18:26.53:269,27,0	0/0:24,0:23:35.84:0,36,320	0/0:18,0:21:37.89:0,38,366	0/1:10,2:13:23.04:23,0,94	1/1:6,15:21:12.53:255,13,0	0/1:5,14:20:17.63:206,0,18	0/1:3,7:10:5.33:129,0,5	0/0:16,2:19:4.03:0,4,339	0/0:25,2:28:19.04:0,19,473	0/0:27,1:31:43.04:0,43,579	0/1:6,0:6:9.89:10,0,76
chr10	55675597	.	CG	C	11813.18	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=14.247;DP=746;FS=2.626;HRun=2;HaplotypeScore=72.1990;InbreedingCoeff=0.9999;MQ=88.08;MQ0=0;MQRankSum=-2.756;QD=36.46;ReadPosRankSum=2.360;VQSLOD=5.6449;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:57:99:0,172,2561	0/0:13,0:13:39.13:0,39,581	0/0:27,0:27:81.27:0,81,1205	0/0:25,0:25:69.91:0,70,933	0/0:29,0:29:84.27:0,84,1236	1/1:0,15:15:36.12:467,36,0	1/1:0,36:36:96.31:1246,96,0	0/0:23,0:22:66.21:0,66,952	1/1:0,29:29:81.26:1051,81,0	1/1:1,24:25:72.20:896,72,0	1/1:0,21:21:60.19:777,60,0	0/0:30,0:30:90.29:0,90,1327	0/0:29,0:29:87.29:0,87,1284	0/0:25,0:25:75.25:0,75,1116	1/1:1,27:28:81.26:1050,81,0	0/0:28,0:28:84.28:0,84,1256	0/0:36,0:36:99:0,99,1483	0/0:25,0:25:75.25:0,75,1115	1/1:0,16:16:48.13:605,48,0	1/1:0,18:18:51.17:662,51,0	1/1:0,45:45:99:1635,126,0	0/0:22,0:22:63.21:0,63,942	0/0:18,0:18:54.17:0,54,781	0/0:35,0:35:99:0,102,1528	1/1:0,25:25:69.70:897,70,0	1/1:0,33:33:99:1285,99,0	1/1:0,23:23:66.21:855,66,0	1/1:1,9:10:30.10:385,30,0
chr10	55676290	.	TTTTA	T	11155.08	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=14.824;DP=577;FS=0.326;HRun=0;HaplotypeScore=99.0728;InbreedingCoeff=0.9981;MQ=65.23;MQ0=1;MQRankSum=-4.369;QD=42.09;ReadPosRankSum=2.751;VQSLOD=5.1209;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:93.32:0,93,2378	0/0:11,0:11:30.10:0,30,757	0/0:16,0:16:39.08:0,39,868	0/0:14,0:14:39.13:0,39,918	0/0:29,0:29:69.22:0,69,1693	1/1:3,24:27:66.10:1160,66,0	1/1:1,18:19:48.11:897,48,0	0/0:29,0:29:81.23:0,81,1846	1/1:0,17:17:41.89:635,42,0	1/1:1,17:18:51.17:948,51,0	1/1:0,16:16:32.96:539,33,0	0/0:14,0:14:39.13:0,39,1009	0/0:23,0:23:66.23:0,66,1708	0/0:6,0:6:18.02:0,18,420	1/1:1,17:18:36.12:673,36,0	0/0:23,0:23:69.22:0,69,1726	0/0:26,0:26:75.19:0,75,1685	0/0:22,0:21:60.21:0,60,1508	1/1:3,22:25:66.12:1094,66,0	1/1:1,20:21:56.89:912,57,0	1/1:3,23:24:51:882,51,0	0/0:20,0:20:60.19:0,60,1474	0/0:19,0:19:57.16:0,57,1375	0/0:27,0:27:81.21:0,81,2010	1/1:0,16:16:35.97:596,36,0	1/1:1,19:20:54.18:983,54,0	1/1:0,33:33:81.08:1476,81,0	1/1:1,8:9:21.05:360,21,0
chr10	55676584	.	G	GT	2944.38	PASS	AB=0.911;AC=30;AF=0.536;AN=56;BaseQRankSum=7.206;DP=523;FS=1.963;HRun=11;HaplotypeScore=89.1706;InbreedingCoeff=0.6845;MQ=59.77;MQ0=16;MQRankSum=-3.164;QD=9.98;ReadPosRankSum=-0.895;VQSLOD=2.9674;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:29,2:30:17.85:18,0,280	1/1:6,0:5:0.20:1,0,0	0/0:39,0:13:2.35:0,2,66	0/0:37,0:9:12.99:0,13,67	0/1:25,1:27:7.82:8,0,249	1/1:10,9:20:45.12:403,45,0	1/1:5,5:8:12.02:120,12,0	0/1:40,0:39:4.11:94,0,4	1/1:11,5:15:29.58:263,30,0	1/1:6,3:10:20.30:156,20,0	1/1:10,7:17:26.96:248,27,0	0/0:18,1:19:8.06:0,8,235	0/0:9,0:9:24.66:0,25,174	0/0:12,0:11:28.14:0,28,212	1/1:11,8:18:10.68:272,11,0	0/0:19,0:19:44.72:0,45,347	0/0:23,0:21:49.85:0,50,377	0/0:25,0:25:50.51:0,51,363	0/1:13,7:20:0.88:250,0,1	1/1:5,11:15:20.97:212,21,0	1/1:3,2:5:14.95:132,15,0	0/0:7,0:7:10:0,10,90	0/0:12,0:12:25.65:0,26,184	0/0:22,0:22:40.58:0,41,306	1/1:2,8:10:12.37:173,12,0	1/1:9,6:15:31.82:292,32,0	1/1:17,7:24:41.66:371,42,0	1/1:4,5:8:14.90:136,15,0
chr10	55676601	.	CT	C	1247.82	PASS	AB=0.888;AC=33;AF=0.589;AN=56;BaseQRankSum=5.800;DP=502;FS=10.746;HRun=14;HaplotypeScore=74.7238;InbreedingCoeff=0.4391;MQ=45.43;MQ0=47;MQRankSum=-5.815;QD=3.96;ReadPosRankSum=-1.678;VQSLOD=-0.0516;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,1:28:18.23:0,18,408	1/1:5,0:4:2.83:14,3,0	1/1:31,0:6:1.82:8,2,0	0/0:32,2:5:8.93:0,9,66	0/1:20,2:24:8.45:8,0,182	1/1:11,4:15:22.18:142,22,0	1/1:6,3:5:10.14:64,10,0	0/1:33,0:38:19.02:49,0,19	1/1:12,4:12:18.41:119,18,0	1/1:5,4:8:11.58:81,12,0	1/1:7,6:12:6.75:107,7,0	0/0:16,1:17:20.99:0,21,306	0/0:11,0:10:11.89:0,12,88	0/1:15,0:13:12.14:12,0,113	1/1:8,12:19:28.42:186,28,0	0/0:19,1:20:25.87:0,26,356	0/0:25,2:19:3.46:0,3,298	0/1:22,5:25:10.17:10,0,309	1/1:12,8:19:0.40:139,0,0	1/1:8,3:12:14.74:88,15,0	1/1:4,0:4:0.84:34,1,0	0/0:8,0:7:12.01:0,12,109	0/0:12,0:11:8.77:0,9,155	0/0:25,0:23:38.83:0,39,333	0/1:8,2:9:15.15:49,0,15	1/1:10,6:13:17.71:120,18,0	1/1:9,7:17:11.87:198,12,0	1/1:8,0:5:1.81:5,2,0
chr10	55678024	.	TAC	T	5606.78	PASS	AB=0.734;AC=25;AF=0.446;AN=56;BaseQRankSum=9.404;DP=578;FS=2.642;HRun=0;HaplotypeScore=87.8583;InbreedingCoeff=0.7610;MQ=62.42;MQ0=4;MQRankSum=-2.630;QD=21.24;ReadPosRankSum=3.193;VQSLOD=4.9082;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:81.28:0,81,1286	0/0:9,0:9:21.07:0,21,333	0/0:21,0:14:33.10:0,33,499	0/0:17,0:10:12.04:0,12,175	0/0:18,0:18:45.62:0,46,702	1/1:8,13:22:50.99:583,51,0	1/1:6,7:14:23.90:262,24,0	0/0:26,0:26:47.88:0,48,762	1/1:5,12:17:36.11:429,36,0	1/1:5,13:18:42.13:501,42,0	1/1:6,8:15:27.01:301,27,0	0/0:24,1:25:12.36:0,12,611	0/0:23,0:23:54.18:0,54,855	0/0:16,1:17:9.38:0,9,607	1/1:5,12:17:36.11:429,36,0	0/0:25,0:25:60.20:0,60,951	0/0:21,1:22:8.26:0,8,629	0/1:22,1:23:21.33:21,0,505	1/1:9,5:14:18.05:215,18,0	0/1:9,12:20:8.66:387,0,9	0/1:6,11:16:20.68:259,0,21	0/0:19,0:19:39.13:0,39,619	0/0:19,1:20:12.39:0,12,672	0/0:36,1:37:36.16:0,36,1041	1/1:5,12:16:39.01:446,39,0	1/1:8,22:30:16.30:667,16,0	1/1:10,10:20:39.12:464,39,0	1/1:1,18:19:54.17:644,54,0
chr10	55678059	.	TTTTTTTTC	T	1061.26	PASS	AB=0.988;AC=18;AF=0.321;AN=56;BaseQRankSum=10.120;DP=548;FS=8.079;HRun=0;HaplotypeScore=170.2595;InbreedingCoeff=0.2026;MQ=50.35;MQ0=8;MQRankSum=-10.330;QD=4.33;ReadPosRankSum=1.575;VQSLOD=2.2117;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:30:63.22:0,63,2067	0/0:9,0:9:0.71:0,1,2	0/1:8,0:5:60.57:61,0,110	0/0:17,0:6:9:0,9,123	0/0:22,0:22:57.19:0,57,1873	1/1:23,0:23:8.12:134,8,0	1/1:18,0:17:16.11:82,16,0	0/0:33,0:29:32.63:0,33,446	0/1:13,0:12:8.30:117,0,8	1/1:23,2:25:29.47:299,29,0	0/1:8,0:8:5.32:5,0,12	0/0:18,0:18:42.14:0,42,1413	0/0:24,0:24:57.19:0,57,1788	0/0:14,0:14:27.09:0,27,882	0/1:23,0:21:40.93:41,0,48	0/0:23,0:23:66.23:0,66,2383	0/0:23,0:23:51.15:0,51,1755	0/0:20,0:19:50.84:0,51,1812	0/1:17,0:17:9.35:64,0,9	0/1:18,0:18:65:65,0,158	0/1:14,1:15:8.16:8,0,39	0/0:16,0:16:39.13:0,39,1281	0/0:21,0:21:51.17:0,51,1649	0/0:31,0:31:81.71:0,82,2783	0/1:18,0:18:17.66:75,0,18	0/1:21,0:21:17.42:17,0,58	1/1:22,0:22:13.25:129,13,0	0/1:15,1:16:11.89:140,0,12
chr10	55678060	.	TTTTTTTC	T	2665.72	PASS	AB=0.986;AC=28;AF=0.500;AN=56;BaseQRankSum=11.275;DP=541;FS=10.374;HRun=0;HaplotypeScore=152.1037;InbreedingCoeff=0.6800;MQ=50.01;MQ0=8;MQRankSum=-8.582;QD=9.45;ReadPosRankSum=-3.052;VQSLOD=1.4962;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:29:65.99:0,66,1798	1/1:8,0:8:8.97:42,9,0	0/1:7,0:4:39.62:40,0,81	0/0:17,0:6:8.96:0,9,126	0/0:22,0:22:57.10:0,57,1623	1/1:21,1:22:29.91:319,30,0	1/1:17,0:16:22.55:195,23,0	0/1:33,0:29:46.40:46,0,168	1/1:12,2:12:19.81:259,20,0	1/1:25,0:25:42.46:455,42,0	1/1:9,0:9:6.42:45,6,0	0/0:17,0:17:42.11:0,42,1229	0/0:25,0:25:59.99:0,60,1590	0/0:12,0:12:27.08:0,27,786	1/1:23,0:21:10.33:157,10,0	0/0:23,0:23:66.22:0,66,2099	0/0:23,0:23:51.16:0,51,1564	0/0:20,0:19:51.09:0,51,1573	1/1:17,0:17:17.26:142,17,0	0/1:16,1:17:99:171,0,132	1/1:16,0:16:17.06:115,17,0	0/0:17,0:17:42.14:0,42,1156	0/0:21,0:21:51.11:0,51,1451	0/0:31,0:31:81.71:0,82,2458	1/1:14,3:17:29.12:278,29,0	0/1:21,0:21:10.34:76,0,10	1/1:21,1:22:29.57:303,30,0	1/1:13,1:14:20.17:238,20,0
chr10	55678061	.	TTTTTTC	T	4836.58	PASS	AB=0.913;AC=29;AF=0.518;AN=56;BaseQRankSum=10.104;DP=538;FS=13.425;HRun=0;HaplotypeScore=134.1984;InbreedingCoeff=0.7591;MQ=49.83;MQ0=9;MQRankSum=-10.516;QD=17.27;ReadPosRankSum=-4.280;VQSLOD=2.5171;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:29:64.05:0,64,1520	1/1:8,0:8:9.89:86,10,0	0/1:7,0:4:34.09:34,0,79	0/0:17,0:6:7.87:0,8,93	0/0:22,0:22:56.95:0,57,1385	1/1:9,12:21:33.05:527,33,0	1/1:6,11:16:22.61:362,23,0	0/1:33,0:29:15.37:142,0,15	1/1:9,4:11:24.06:378,24,0	1/1:11,14:25:42.47:666,42,0	1/1:6,3:9:11.90:112,12,0	0/0:17,0:17:42.09:0,42,1055	0/0:25,0:25:60.01:0,60,1338	0/0:10,0:10:27.09:0,27,679	1/1:13,10:21:35.02:431,35,0	0/0:23,0:23:69.22:0,69,1851	0/0:24,0:24:54.13:0,54,1363	0/0:21,0:20:54.12:0,54,1398	1/1:11,6:17:20.97:247,21,0	0/1:11,6:17:99:296,0,110	1/1:17,1:17:30.22:199,30,0	0/0:17,0:17:41.95:0,42,968	0/0:20,0:20:50.94:0,51,1209	0/0:31,0:31:84.64:0,85,2129	1/1:12,5:17:33.87:347,34,0	1/1:18,3:21:10.77:197,11,0	1/1:8,12:20:32.86:470,33,0	1/1:11,3:14:24.04:343,24,0
chr10	55678062	.	TTTTTC	T	4290.23	PASS	AB=0.969;AC=30;AF=0.536;AN=56;BaseQRankSum=10.890;DP=528;FS=12.858;HRun=0;HaplotypeScore=124.4720;InbreedingCoeff=0.8340;MQ=49.80;MQ0=9;MQRankSum=-9.822;QD=15.72;ReadPosRankSum=-5.411;VQSLOD=1.6561;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:28:43.18:0,43,1237	1/1:3,5:8:10.28:166,10,0	0/1:5,0:4:30.23:30,0,65	0/0:16,0:6:7.98:0,8,95	0/0:22,0:22:56.10:0,56,1136	1/1:20,1:21:33.05:413,33,0	1/1:17,0:16:22.60:247,23,0	1/1:30,3:29:59.21:449,59,0	1/1:11,0:9:24.06:289,24,0	1/1:25,0:25:42.88:503,43,0	1/1:9,0:9:11.90:93,12,0	0/0:17,0:17:45.06:0,45,898	0/0:25,0:25:58.99:0,59,1105	0/0:10,0:10:27.07:0,27,560	1/1:22,1:21:37.93:338,38,0	0/0:23,0:23:69.20:0,69,1565	0/0:24,0:24:54.11:0,54,1155	0/0:21,0:20:54.02:0,54,1173	1/1:17,0:17:20.80:190,21,0	0/1:14,1:15:80.14:242,0,80	1/1:17,0:16:30.20:197,30,0	0/0:17,0:17:41.13:0,41,796	0/0:19,0:19:50.86:0,51,1017	0/0:31,0:31:84.56:0,85,1805	1/1:17,0:17:34.42:309,34,0	1/1:20,0:20:24.74:193,25,0	1/1:20,0:20:32.41:349,32,0	1/1:14,0:14:24.04:282,24,0
chr10	55678063	.	TTTTC	T	4159.05	PASS	AB=1.000;AC=30;AF=0.536;AN=56;BaseQRankSum=10.279;DP=523;FS=9.436;HRun=0;HaplotypeScore=114.5528;InbreedingCoeff=0.8280;MQ=49.80;MQ0=8;MQRankSum=-8.489;QD=15.52;ReadPosRankSum=-5.705;VQSLOD=0.7075;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:27:10.11:0,10,955	1/1:8,0:8:10.58:112,11,0	0/1:6,0:4:25.38:25,0,39	0/0:15,0:6:7.85:0,8,73	0/0:22,0:22:50.42:0,50,924	1/1:20,0:20:33.04:373,33,0	1/1:17,0:16:22.59:228,23,0	1/1:27,7:30:73.20:631,73,0	1/1:11,0:9:24.06:270,24,0	1/1:24,0:24:42.88:450,43,0	1/1:8,0:8:11.90:96,12,0	0/0:17,0:17:45.02:0,45,752	0/0:24,0:24:49.10:0,49,902	0/0:10,0:10:27.06:0,27,463	1/1:22,0:20:38.02:309,38,0	0/0:23,0:23:69.20:0,69,1334	0/0:24,0:24:54.09:0,54,951	0/0:21,0:20:53.85:0,54,970	1/1:15,0:15:20.95:186,21,0	0/1:15,0:15:61.33:212,0,61	1/1:17,0:16:30.02:196,30,0	0/0:17,0:17:40.85:0,41,669	0/0:20,0:20:53.27:0,53,851	0/0:33,0:33:91.55:0,92,1535	1/1:17,0:17:34.61:288,35,0	1/1:21,0:21:29.43:224,29,0	1/1:19,0:19:32.40:310,32,0	1/1:14,0:14:24.03:246,24,0
chr10	55679880	.	CAG	C	13110.27	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=15.734;DP=746;FS=1.199;HRun=0;HaplotypeScore=93.5064;InbreedingCoeff=0.9956;MQ=90.04;MQ0=0;MQRankSum=-4.103;QD=37.57;ReadPosRankSum=-0.765;VQSLOD=6.2920;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:62,0:62:99:0,187,3384	1/1:0,4:4:12.04:172,12,0	0/0:24,0:24:60.21:0,60,1076	0/0:33,0:33:89.96:0,90,1554	0/0:21,0:21:60.21:0,60,1095	1/1:0,31:31:72.24:1031,72,0	1/1:3,30:33:78.26:1118,78,0	1/1:2,25:27:75.25:1070,75,0	1/1:0,27:27:75.25:1075,75,0	1/1:1,23:24:72.23:1015,72,0	1/1:0,25:25:69.23:988,69,0	0/0:33,0:33:99:0,99,1767	0/0:29,0:29:84.29:0,84,1540	0/0:27,0:27:75.26:0,75,1375	1/1:0,26:26:72.24:1032,72,0	0/0:43,0:43:99:0,126,2273	0/0:37,0:37:99:0,105,1925	0/0:19,0:19:51.17:0,51,927	1/1:1,14:15:42.10:545,42,0	1/1:3,21:24:51.17:724,51,0	1/1:3,32:35:90.30:1289,90,0	0/0:20,0:20:60.21:0,60,1077	0/0:11,0:11:33.11:0,33,605	0/0:38,0:37:99:0,111,2025	1/1:0,18:18:54.18:774,54,0	1/1:0,24:24:69.23:989,69,0	1/1:2,23:25:63.07:901,63,0	1/1:0,11:11:27.09:387,27,0
chr10	55680174	.	GA	G	570.97	PASS	AB=0.777;AC=9;AF=0.161;AN=56;BaseQRankSum=3.180;DP=617;FS=2.056;HRun=8;HaplotypeScore=180.0848;InbreedingCoeff=-0.1557;MQ=54.89;MQ0=11;MQRankSum=-4.193;QD=3.59;ReadPosRankSum=-1.132;VQSLOD=-0.4031;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:61,0:60:99:0,175,2089	0/0:7,0:9:17.11:0,17,88	0/0:23,0:13:36.11:0,36,429	0/0:15,0:7:18.05:0,18,210	0/0:25,1:26:40.23:0,40,757	0/0:17,3:17:0.42:0,0,145	0/1:19,4:19:38.89:39,0,74	0/1:14,7:17:72.73:82,0,73	0/1:9,5:14:43.49:57,0,43	0/1:21,9:28:92.69:201,0,93	0/1:19,3:22:7.28:7,0,170	0/0:25,0:25:66.18:0,66,776	0/0:25,0:25:72.17:0,72,835	0/0:20,1:20:28.17:0,28,591	0/0:13,0:16:11.21:0,11,82	0/0:18,0:17:42.13:0,42,507	0/0:39,0:39:99:0,105,1268	0/0:25,0:24:57.65:0,58,689	0/1:10,2:10:27.44:43,0,27	0/0:14,5:16:27.40:0,27,135	0/1:5,1:6:19.68:20,0,20	0/0:17,0:17:51.16:0,51,616	0/0:18,0:18:48.13:0,48,563	0/0:40,0:40:99:0,111,1330	0/0:12,1:13:23.03:0,23,118	0/1:14,11:24:64.07:210,0,64	0/0:19,1:25:6.25:0,6,151	0/1:2,4:6:5.46:49,0,5
chr10	55680272	.	CA	C	11892.91	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=12.767;DP=711;FS=18.836;HRun=1;HaplotypeScore=70.6716;InbreedingCoeff=0.9999;MQ=83.36;MQ0=0;MQRankSum=-2.068;QD=39.38;ReadPosRankSum=2.931;VQSLOD=3.1406;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,147,2297	0/0:10,0:10:30.09:0,30,456	0/0:23,0:23:69.22:0,69,1079	0/0:29,0:28:81.24:0,81,1252	0/0:26,0:26:75.24:0,75,1176	1/1:0,21:21:54.18:755,54,0	1/1:0,16:16:39.13:545,39,0	0/0:25,0:25:69.23:0,69,1095	1/1:0,16:16:48.16:671,48,0	1/1:0,40:40:99:1655,120,0	1/1:0,28:28:78.26:1087,78,0	0/0:33,0:33:99:0,99,1578	0/0:30,0:30:90.29:0,90,1415	0/0:17,0:17:51.17:0,51,813	1/1:0,24:24:69.23:965,69,0	0/0:24,0:24:72.25:0,72,1151	0/0:35,0:35:99:0,102,1552	0/0:29,0:29:87.27:0,87,1364	1/1:0,22:22:66.20:905,66,0	1/1:0,23:23:63.21:881,63,0	1/1:0,29:29:78.26:1091,78,0	0/0:25,0:25:75.24:0,75,1176	0/0:25,0:25:75.23:0,75,1169	0/0:24,0:24:72.22:0,72,1120	1/1:0,17:17:51.17:713,51,0	1/1:0,29:29:84.27:1157,84,0	1/1:0,22:22:63.21:881,63,0	1/1:0,15:15:42.14:587,42,0
chr10	55680366	.	A	AGTGT	3817.68	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-9.751;DP=644;FS=4.246;HRun=0;HaplotypeScore=148.0418;InbreedingCoeff=0.9827;MQ=90.83;MQ0=0;MQRankSum=-3.858;QD=46.56;ReadPosRankSum=4.697;VQSLOD=4.3945;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,45:52:87.29:2306,87,0	0/0:5,0:5:12.04:0,12,212	0/0:26,0:26:44.91:0,45,952	0/0:28,0:28:75.23:0,75,1273	1/1:3,26:30:57.20:1511,57,0	0/0:15,0:15:45.12:0,45,754	0/0:28,0:27:69.22:0,69,1227	0/0:28,0:28:78.24:0,78,1352	0/0:23,0:23:63.17:0,63,1093	0/0:27,0:27:69.23:0,69,1245	0/0:15,0:15:42.13:0,42,738	0/0:25,0:25:66.21:0,66,1121	0/0:21,0:21:57.19:0,57,1036	0/0:17,0:17:45.14:0,45,808	0/0:21,0:21:57.20:0,57,1055	0/0:11,0:11:27.09:0,27,487	0/0:27,0:27:75.26:0,75,1290	0/0:23,0:23:66.09:0,66,988	0/0:22,0:22:60.16:0,60,1048	0/0:20,0:20:51.16:0,51,905	0/0:46,0:46:99:0,120,2091	0/0:20,0:20:51.17:0,51,880	0/0:18,0:18:48.10:0,48,738	0/0:28,0:28:78.23:0,78,1303	0/0:20,0:20:60.21:0,60,1118	0/0:26,0:26:69.22:0,69,1202	0/0:14,0:14:36.11:0,36,640	0/0:8,0:8:24.08:0,24,445
chr10	55680801	.	C	CTA	2273.95	PASS	AB=0.571;AC=20;AF=0.385;AN=52;BaseQRankSum=-6.878;DP=445;FS=16.549;HRun=0;HaplotypeScore=95.5770;InbreedingCoeff=0.6269;MQ=78.43;MQ0=10;MQRankSum=-1.701;QD=16.24;ReadPosRankSum=1.669;VQSLOD=2.7494;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:14:20.61:0,21,279	0/0:6,0:6:6.63:0,7,83	0/0:48,0:20:35.81:0,36,573	0/0:67,0:33:63.04:0,63,715	0/0:25,0:24:37.91:0,38,490	1/1:2,15:17:8.96:106,9,0	1/1:11,0:11:3.01:40,3,0	0/0:19,0:19:39.09:0,39,544	./.	1/1:6,10:16:0.19:413,0,0	1/1:1,9:10:2.95:44,3,0	0/0:12,0:12:18.05:0,18,237	0/0:17,0:17:48.15:0,48,704	0/0:15,0:15:42.09:0,42,554	0/1:3,16:19:11.37:50,0,11	0/0:11,0:11:15.99:0,16,133	0/0:17,0:17:39.07:0,39,483	0/0:8,0:8:20.93:0,21,237	1/1:0,10:10:30.10:484,30,0	1/1:1,13:14:8.45:127,8,0	./.	0/0:10,0:10:8.39:0,8,96	0/0:6,0:6:6.02:0,6,89	0/0:12,0:12:8.15:0,8,130	1/1:1,6:7:3.01:38,3,0	1/1:4,18:22:46.85:981,47,0	1/1:1,10:11:6.02:116,6,0	0/1:1,2:3:11.27:52,0,11
chr10	55680802	.	T	TATGAGAGA	6187.88	PASS	AB=0.959;AC=33;AF=0.611;AN=54;BaseQRankSum=-0.492;DP=547;FS=1.542;HRun=0;HaplotypeScore=180.4473;InbreedingCoeff=0.2031;MQ=70.14;MQ0=11;MQRankSum=-5.032;QD=17.53;ReadPosRankSum=-1.634;VQSLOD=3.8466;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:25:21.21:0,21,281	0/1:6,0:6:68.31:75,0,68	0/0:48,0:19:35.30:0,35,635	0/0:66,0:32:27.15:0,27,775	0/1:37,0:35:15.16:15,0,321	1/1:20,0:20:12.50:133,12,0	1/1:5,8:15:4.83:143,5,0	0/1:28,0:26:99:249,0,418	1/1:12,0:12:15.05:297,15,0	1/1:17,0:17:39.13:634,39,0	1/1:12,0:12:3.48:117,3,0	0/1:16,0:16:72.59:73,0,190	0/0:18,0:18:48.16:0,48,1051	0/0:13,0:15:44.96:0,45,855	1/1:22,0:22:12.04:319,12,0	0/1:10,0:14:71.48:257,0,71	0/1:20,0:20:99:129,0,412	0/1:10,0:12:99:368,0,168	1/1:14,0:14:42.13:705,42,0	1/1:16,0:16:12.04:269,12,0	./.	0/1:15,0:15:38.83:57,0,39	0/0:10,0:10:5.85:0,6,89	0/1:16,0:16:99:190,0,114	1/1:7,0:7:3.01:38,3,0	1/1:28,0:27:78.26:1405,78,0	1/1:20,0:19:27.09:572,27,0	1/1:5,0:5:9.03:144,9,0
chr10	55681036	.	C	CAG	12223.54	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-16.567;DP=673;FS=0.980;HRun=0;HaplotypeScore=76.8236;InbreedingCoeff=0.9947;MQ=76.36;MQ0=3;MQRankSum=-4.597;QD=44.94;ReadPosRankSum=1.978;VQSLOD=6.3300;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:57:99:0,144,1995	0/0:7,0:7:18.06:0,18,252	0/0:26,0:26:63.20:0,63,865	0/0:22,0:22:60.19:0,60,796	0/0:35,0:35:81.27:0,81,1134	1/1:1,15:16:39.13:702,39,0	1/1:1,15:16:39.13:702,39,0	0/0:30,0:30:69.21:0,69,936	1/1:1,21:22:57.20:1026,57,0	1/1:2,15:17:42.14:757,42,0	1/1:0,14:14:30.10:540,30,0	0/0:25,0:25:72.23:0,72,988	0/0:25,0:25:69.23:0,69,967	0/0:20,0:20:57.18:0,57,781	1/1:1,31:32:75.26:1348,75,0	0/0:22,1:23:12.17:0,12,811	0/0:38,0:38:99:0,105,1471	0/0:24,0:24:66.22:0,66,924	1/1:2,22:25:69.21:1211,69,0	1/1:2,23:23:57.20:1027,57,0	1/1:0,19:20:54.19:972,54,0	0/0:14,0:14:39.12:0,39,529	0/0:24,0:24:54.18:0,54,756	0/0:31,0:31:87.27:0,87,1200	1/1:0,18:18:54.19:972,54,0	1/1:1,24:25:63.22:1131,63,0	1/1:2,20:22:54.19:972,54,0	1/1:2,18:19:48.16:864,48,0
chr10	55681642	.	GT	G	459.39	PASS	AB=0.929;AC=35;AF=0.648;AN=54;BaseQRankSum=1.258;DP=167;FS=1.015;HRun=1;HaplotypeScore=30.6883;InbreedingCoeff=-0.0092;MQ=100.57;MQ0=5;MQRankSum=-0.774;QD=3.99;ReadPosRankSum=4.131;VQSLOD=0.4727;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:10,0:10:29.41:34,0,29	1/1:1,0:1:1.82:5,2,0	0/1:17,1:12:20.42:20,0,69	0/0:32,1:18:1.92:0,2,115	1/1:7,0:7:9.56:35,10,0	./.	0/1:9,0:8:34.56:35,0,39	1/1:3,1:4:6.28:33,6,0	1/1:1,0:1:3:25,3,0	1/1:2,0:2:0.13:0,0,0	0/1:5,0:5:1.42:1,0,18	1/1:3,0:3:7.23:33,7,0	0/1:3,0:3:17.06:17,0,17	1/1:3,0:3:3.95:10,4,0	0/1:6,0:6:10.19:55,0,10	1/1:3,0:3:2.04:6,2,0	0/0:7,0:7:3.74:0,4,43	0/0:7,0:7:0.98:0,1,54	0/1:1,1:2:13.93:26,0,14	0/0:4,0:4:2.99:0,3,25	0/1:6,3:9:31.14:47,0,31	1/1:7,0:7:7.90:34,8,0	0/1:7,0:7:6.63:50,0,7	1/1:3,0:3:5.80:42,6,0	1/1:5,0:5:6.23:18,6,0	0/0:1,0:1:0.47:0,0,1	1/1:6,0:6:13.11:57,13,0	1/1:1,0:1:2.90:16,3,0
chr10	55681643	.	TG	T	1387.22	PASS	AB=0.713;AC=46;AF=0.885;AN=52;BaseQRankSum=-5.314;DP=171;FS=10.256;HRun=7;HaplotypeScore=28.9676;InbreedingCoeff=0.0475;MQ=101.40;MQ0=5;MQRankSum=-2.570;QD=9.25;ReadPosRankSum=4.122;VQSLOD=-0.1252;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:4,6:10:4.75:52,0,5	1/1:0,1:1:3.01:30,3,0	0/0:19,1:13:7.08:0,7,82	0/1:29,4:18:73.59:74,0,87	1/1:2,5:7:12.03:122,12,0	./.	1/1:9,0:8:6:57,6,0	1/1:2,2:4:8.85:75,9,0	1/1:0,1:1:3.01:31,3,0	1/1:2,0:2:5.94:40,6,0	1/1:1,4:5:3.01:31,3,0	0/1:2,2:4:8.95:52,0,9	1/1:3,0:3:5.50:39,6,0	1/1:3,0:3:8.95:70,9,0	1/1:6,0:6:3.30:29,3,0	1/1:0,3:3:3.01:31,3,0	1/1:7,0:7:2.77:21,3,0	1/1:3,4:7:3.01:31,3,0	1/1:2,0:2:3.01:30,3,0	0/1:2,2:4:0:0,0,0	1/1:7,3:10:18.04:180,18,0	1/1:0,7:7:9.02:92,9,0	1/1:2,5:7:5.41:113,5,0	1/1:2,1:3:6:54,6,0	1/1:1,4:5:9.02:92,9,0	./.	1/1:1,5:6:11.74:122,12,0	1/1:0,1:1:3.01:31,3,0
chr10	55681747	.	CG	C	230.59	PASS	AB=0.944;AC=16;AF=0.444;AN=36;BaseQRankSum=-0.977;DP=79;FS=8.039;HRun=11;HaplotypeScore=19.3078;InbreedingCoeff=0.4277;MQ=120.12;MQ0=0;MQRankSum=-2.566;QD=6.41;ReadPosRankSum=2.633;VQSLOD=-0.0372;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,0:3:2.37:8,2,0	./.	0/0:12,0:11:15.57:0,16,118	0/0:10,0:7:4.96:0,5,19	1/1:0,1:1:3:25,3,0	./.	0/0:1,0:1:2.98:0,3,22	./.	0/0:1,0:1:0:0,0,0	./.	0/0:1,0:1:3.01:0,3,32	1/1:1,4:5:11.99:99,12,0	0/0:4,0:4:9.01:0,9,89	0/0:1,0:1:3.01:0,3,32	./.	0/0:3,0:3:3:0,3,26	0/0:4,0:4:5.23:0,5,39	1/1:3,4:7:14.98:123,15,0	./.	1/1:2,0:2:2.04:6,2,0	0/1:7,1:8:15.56:16,0,41	0/1:3,0:3:0:0,0,0	./.	1/1:2,2:4:8.98:73,9,0	./.	./.	1/1:3,0:3:0.46:0,0,0	./.
chr10	55681821	.	C	CG	1011.12	PASS	AB=0.571;AC=27;AF=0.500;AN=54;BaseQRankSum=7.498;DP=177;FS=20.575;HRun=3;HaplotypeScore=29.9201;InbreedingCoeff=0.7115;MQ=85.41;MQ0=0;MQRankSum=-2.452;QD=18.72;ReadPosRankSum=-0.945;VQSLOD=1.6969;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:54.17:0,54,664	1/1:3,0:4:5.34:21,5,0	0/0:9,0:9:21.06:0,21,248	0/0:10,0:9:14.84:0,15,159	0/0:2,0:2:6.02:0,6,74	1/1:0,2:2:6.02:78,6,0	1/1:0,2:2:3.01:39,3,0	1/1:7,0:7:18.88:80,19,0	1/1:0,4:4:9.03:117,9,0	1/1:1,6:7:18.04:216,18,0	./.	0/0:17,0:17:45.14:0,45,549	0/0:7,0:7:21.06:0,21,251	0/0:4,0:4:12.02:0,12,136	1/1:0,1:1:3.01:31,3,0	0/0:9,0:9:27.08:0,27,335	0/0:7,0:7:21.07:0,21,260	0/0:19,0:19:57.18:0,57,705	1/1:2,0:2:0.75:2,1,0	1/1:1,2:3:6.02:79,6,0	1/1:3,8:11:5.04:214,5,0	0/0:6,0:6:9.03:0,9,111	0/0:3,0:3:9.03:0,9,111	0/0:8,0:8:24.08:0,24,297	0/1:1,3:4:3.03:105,0,3	1/1:1,0:1:2.98:22,3,0	1/1:1,3:4:9.03:117,9,0	1/1:0,2:2:6.02:78,6,0
chr10	55681823	.	G	GGGT	803.78	PASS	AB=1.000;AC=20;AF=0.370;AN=54;BaseQRankSum=6.921;DP=184;FS=22.494;HRun=0;HaplotypeScore=41.3665;InbreedingCoeff=0.4946;MQ=86.69;MQ0=0;MQRankSum=-1.348;QD=14.10;ReadPosRankSum=0.890;VQSLOD=1.5523;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:57.16:0,57,1015	1/1:1,2:3:6.02:112,6,0	0/0:10,0:10:26.29:0,26,392	0/0:10,0:9:20.60:0,21,298	0/0:2,0:2:6.02:0,6,112	1/1:3,0:3:5.75:34,6,0	1/1:2,0:2:2.92:17,3,0	1/1:0,7:7:21.07:483,21,0	1/1:4,0:4:8.73:49,9,0	1/1:9,0:9:15.91:93,16,0	./.	0/0:17,0:17:51.11:0,51,870	0/0:7,0:7:21.07:0,21,375	0/0:5,0:5:15.03:0,15,235	1/1:1,0:1:2.22:7,2,0	0/0:9,0:9:27.09:0,27,503	0/0:7,0:7:21.07:0,21,391	0/0:19,0:19:57.20:0,57,1062	0/0:2,0:2:3.44:0,3,21	0/1:4,0:4:17.30:17,0,26	0/1:12,0:12:40.50:61,0,41	0/0:4,0:4:9.03:0,9,164	0/0:3,0:3:9.03:0,9,156	0/0:9,0:9:24.08:0,24,447	0/1:6,0:6:14.30:39,0,14	0/0:1,0:1:0:0,0,0	0/1:4,0:4:8.50:35,0,9	1/1:2,0:2:5.78:31,6,0
chr10	55683355	.	CAA	C	7719.10	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=10.478;DP=585;FS=5.799;HRun=9;HaplotypeScore=83.2821;InbreedingCoeff=0.9782;MQ=70.41;MQ0=2;MQRankSum=-0.852;QD=26.53;ReadPosRankSum=3.323;VQSLOD=4.7717;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:28:74.74:0,75,1172	0/0:1,0:5:9.98:0,10,35	0/0:12,0:13:6.27:0,6,278	0/0:14,0:11:23.83:0,24,363	0/0:25,0:25:69.24:0,69,1126	1/1:3,23:26:60.17:699,60,0	1/1:0,15:15:36.11:420,36,0	0/0:6,0:33:65.26:0,65,235	1/1:2,19:21:48.14:559,48,0	1/1:5,31:35:84.22:978,84,0	1/1:6,13:19:33.08:385,33,0	0/0:16,0:16:30.10:0,30,486	0/0:11,0:12:24.07:0,24,351	0/0:10,0:10:27.09:0,27,443	1/1:2,19:21:51.15:594,51,0	0/0:20,0:20:44.97:0,45,676	0/0:35,0:35:90.25:0,90,1423	0/0:24,0:24:60.20:0,60,942	1/1:2,14:16:42.12:488,42,0	1/1:2,27:29:78.23:906,78,0	1/1:6,24:30:54.16:629,54,0	0/0:18,0:18:42.08:0,42,686	0/0:27,0:27:69.21:0,69,1104	0/0:14,0:14:39.60:0,40,629	1/1:0,14:14:27.08:315,27,0	1/1:2,27:28:78.23:908,78,0	1/1:5,23:28:51.13:594,51,0	1/1:0,7:7:21.06:245,21,0
chr10	55683720	.	C	CAAG	2744.99	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=0.840;DP=617;FS=10.688;HRun=0;HaplotypeScore=113.3591;InbreedingCoeff=0.9564;MQ=64.25;MQ0=1;MQRankSum=-8.482;QD=59.67;ReadPosRankSum=-4.883;VQSLOD=3.4391;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:86.45:0,86,1574	1/1:4,9:14:42.14:949,42,0	0/0:18,0:18:13.30:0,13,700	0/0:7,0:7:8.73:0,9,261	0/0:26,0:26:78.27:0,78,1376	0/0:14,0:14:36.12:0,36,617	0/0:12,0:12:33.11:0,33,576	1/1:11,19:31:84.29:1917,84,0	0/0:24,0:24:69.24:0,69,1207	0/0:31,0:31:93.31:0,93,1603	0/0:38,0:38:99:0,108,1867	0/0:10,0:10:27.09:0,27,476	0/0:10,0:10:27.09:0,27,468	0/0:22,0:22:60.20:0,60,1039	0/0:22,0:22:66.20:0,66,1107	0/0:16,0:16:48.16:0,48,836	0/0:28,0:28:78.25:0,78,1348	0/0:25,0:25:69.24:0,69,1216	0/0:23,0:23:69.22:0,69,1161	0/0:27,0:27:81.28:0,81,1429	0/0:12,0:12:36.11:0,36,607	0/0:23,0:23:69.24:0,69,1211	0/0:31,0:31:93.32:0,93,1636	0/0:12,0:11:33.11:0,33,582	0/0:20,0:20:54.13:0,54,919	0/0:41,0:41:99:0,120,2086	0/0:24,0:23:72.25:0,72,1242	0/0:21,0:21:63.15:0,63,1021
chr10	55683739	.	GA	G	8355.82	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=12.874;DP=598;FS=18.969;HRun=9;HaplotypeScore=67.2411;InbreedingCoeff=0.9861;MQ=65.29;MQ0=1;MQRankSum=2.203;QD=23.94;ReadPosRankSum=-0.301;VQSLOD=3.4430;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,102,1141	1/1:1,11:12:33.02:302,33,0	0/0:15,0:14:33.09:0,33,372	0/0:6,0:6:7.56:0,8,73	0/0:23,0:24:60.01:0,60,670	1/1:1,14:15:39.02:357,39,0	1/1:4,6:10:18:165,18,0	1/1:4,28:31:81.04:740,81,0	1/1:3,20:23:60.02:549,60,0	1/1:3,29:32:87:788,87,0	1/1:4,36:40:99:988,108,0	0/0:14,0:14:42.11:0,42,474	0/0:8,0:8:24.07:0,24,276	0/0:16,0:16:38.98:0,39,430	1/1:1,19:20:57.03:522,57,0	0/0:16,0:16:45.09:0,45,505	0/0:24,0:24:63.15:0,63,711	0/0:25,0:25:60.18:0,60,691	1/1:4,15:19:44.99:404,45,0	1/1:4,28:32:75.01:686,75,0	1/1:3,7:10:21.01:192,21,0	0/0:23,0:23:66.20:0,66,761	0/0:33,0:33:96.29:0,96,1108	0/0:8,0:7:18.05:0,18,208	1/1:0,24:24:72.04:658,72,0	1/1:1,34:35:99:933,102,0	1/1:1,24:25:66.04:604,66,0	1/1:2,18:20:51.03:467,51,0
chr10	55684844	.	CT	C	2084.46	PASS	AB=0.989;AC=33;AF=0.589;AN=56;BaseQRankSum=5.331;DP=454;FS=3.724;HRun=10;HaplotypeScore=68.7867;InbreedingCoeff=0.1709;MQ=80.43;MQ0=5;MQRankSum=0.260;QD=6.02;ReadPosRankSum=5.219;VQSLOD=1.1409;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,17:17:47.99:417,48,0	0/0:7,0:7:20.86:0,21,198	0/1:29,0:13:21.38:21,0,91	0/0:24,0:18:3.24:0,3,62	1/1:3,17:20:41.94:358,42,0	1/1:9,0:9:11.24:30,11,0	0/1:11,0:11:14.39:14,0,26	0/0:40,0:40:74.89:0,75,728	0/0:2,0:2:0.81:0,1,21	0/1:19,0:19:4.66:5,0,41	0/1:21,0:21:30.36:30,0,33	1/1:1,13:15:35.03:292,35,0	0/0:17,0:17:45.10:0,45,482	0/1:6,1:7:6.75:7,0,149	0/1:16,0:16:3.46:3,0,76	0/0:17,0:17:10.64:0,11,292	1/1:4,15:19:41.98:365,42,0	1/1:4,8:13:20.03:162,20,0	0/1:27,0:26:27.68:28,0,99	0/1:12,0:12:7.65:8,0,27	1/1:5,0:5:6.13:15,6,0	1/1:2,2:4:6:52,6,0	1/1:5,11:16:26.97:234,27,0	1/1:2,3:5:14.21:108,14,0	0/1:16,0:16:6.35:24,0,6	0/1:21,0:21:21.18:21,0,80	0/1:35,0:35:40.10:40,0,67	1/1:9,0:9:11.03:29,11,0
chr10	55684854	.	TA	T	4315.03	PASS	AB=0.995;AC=32;AF=0.571;AN=56;BaseQRankSum=0.654;DP=442;FS=3.528;HRun=8;HaplotypeScore=64.1049;InbreedingCoeff=0.5385;MQ=85.12;MQ0=5;MQRankSum=-2.067;QD=13.70;ReadPosRankSum=6.846;VQSLOD=4.1750;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:19,0:19:7.72:8,0,35	0/0:7,0:7:9.23:0,9,26	0/0:34,0:15:5.46:0,5,131	0/1:29,1:22:0.97:1,0,89	0/1:17,0:17:4.85:5,0,28	1/1:0,9:9:24.04:231,24,0	1/1:1,9:10:24.04:231,24,0	0/1:32,0:32:56:70,0,56	1/1:3,0:3:6:54,6,0	1/1:2,13:15:39.05:374,39,0	1/1:2,17:19:47.75:457,48,0	0/0:17,0:17:16.06:0,16,103	0/0:20,0:20:54.08:0,54,573	0/0:13,0:13:34.70:0,35,339	1/1:3,13:16:27.04:260,27,0	0/0:13,0:13:33.07:0,33,361	0/1:16,0:16:5.18:5,0,15	0/1:11,0:11:15.01:21,0,15	1/1:7,14:20:45.60:448,46,0	1/1:1,12:13:32.50:290,33,0	1/1:0,6:6:15.02:145,15,0	0/0:3,0:3:1.24:0,1,21	0/0:13,0:13:5.89:0,6,50	0/0:7,0:7:5.43:0,5,61	1/1:1,14:15:33.05:318,33,0	1/1:3,16:19:41.88:427,42,0	1/1:6,28:34:81.04:768,81,0	1/1:0,10:10:21.03:202,21,0
chr10	55686326	.	CA	C	3001.88	PASS	AB=1.000;AC=25;AF=0.446;AN=56;BaseQRankSum=19.233;DP=683;FS=5.755;HRun=1;HaplotypeScore=91.0007;InbreedingCoeff=0.9317;MQ=82.69;MQ0=0;MQRankSum=-3.354;QD=9.97;ReadPosRankSum=1.990;VQSLOD=1.5340;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,105,1642	0/0:13,0:13:36.12:0,36,548	0/0:20,0:20:51.11:0,51,808	0/0:30,0:30:89.80:0,90,1303	0/0:20,0:20:57.19:0,57,898	1/1:16,0:16:20.74:173,21,0	1/1:41,0:41:63.28:442,63,0	0/0:19,0:19:57.18:0,57,868	1/1:15,1:16:44.74:236,45,0	1/1:28,2:30:60.32:282,60,0	0/1:16,0:16:7.94:125,0,8	0/0:30,0:30:87.28:0,87,1344	0/0:17,0:17:48.16:0,48,766	0/0:39,0:39:99:0,114,1768	1/1:25,0:25:61.11:287,61,0	0/0:19,0:19:57.17:0,57,857	0/0:41,0:41:99:0,120,1870	0/0:41,0:41:99:0,123,1928	1/1:24,0:24:17.96:179,18,0	1/1:13,1:14:15.17:163,15,0	1/1:43,1:43:83.79:492,84,0	0/0:15,0:15:45.14:0,45,694	0/0:22,0:22:63.21:0,63,995	0/0:21,0:21:63.18:0,63,954	1/1:13,0:13:36.32:181,36,0	1/1:34,2:36:17.17:349,17,0	1/1:19,0:19:44.89:222,45,0	1/1:7,0:7:19.79:97,20,0
chr10	55686327	.	AC	A	9968.41	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=12.596;DP=678;FS=6.387;HRun=3;HaplotypeScore=67.2312;InbreedingCoeff=0.9994;MQ=83.44;MQ0=0;MQRankSum=-1.815;QD=33.68;ReadPosRankSum=1.064;VQSLOD=5.3736;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,108,1513	0/0:13,0:13:36.12:0,36,517	0/0:21,0:21:54.06:0,54,731	0/0:32,0:31:78.31:0,78,1199	0/0:19,0:19:57.19:0,57,820	1/1:0,15:15:45.14:558,45,0	1/1:2,39:41:99:1412,114,0	0/0:19,0:19:54.17:0,54,762	1/1:1,15:16:48.15:590,48,0	1/1:3,24:27:72.22:887,72,0	1/1:2,14:16:39.12:483,39,0	0/0:30,0:30:87.28:0,87,1232	0/0:17,0:17:48.16:0,48,691	0/0:38,0:38:99:0,108,1534	1/1:0,25:25:66.21:818,66,0	0/0:19,0:19:51.17:0,51,733	0/0:41,0:41:99:0,120,1707	0/0:41,0:41:99:0,123,1770	1/1:1,23:24:66.21:817,66,0	1/1:1,12:13:39.12:482,39,0	1/1:3,41:44:99:1412,114,0	0/0:14,0:14:42.14:0,42,599	0/0:22,0:22:66.18:0,66,911	0/0:20,0:20:57.19:0,57,821	1/1:0,13:13:39.12:483,39,0	1/1:4,32:36:95.96:1174,96,0	1/1:1,18:19:48.15:593,48,0	1/1:0,7:7:21.07:259,21,0
chr10	55686945	.	AAAGCAAGC	A	13925.48	PASS	AC=24;AF=0.444;AN=54;BaseQRankSum=16.263;DP=814;FS=1.036;HRun=0;HaplotypeScore=218.5816;InbreedingCoeff=0.9990;MQ=66.93;MQ0=0;MQRankSum=-14.718;QD=42.07;ReadPosRankSum=-0.296;VQSLOD=4.5656;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,123,4881	0/0:9,0:20:47.95:0,48,1511	0/0:30,0:28:60.21:0,60,2138	0/0:31,0:28:54.16:0,54,1978	0/0:18,0:18:45.11:0,45,1694	1/1:5,18:23:33.11:861,33,0	1/1:11,16:27:39.13:1018,39,0	0/0:25,0:28:45.15:0,45,1449	1/1:7,11:18:27.09:705,27,0	1/1:11,28:39:84.25:1968,84,0	1/1:7,7:14:21.07:542,21,0	0/0:37,0:37:87.30:0,87,3473	0/0:41,0:41:99:0,114,4557	0/0:33,0:33:75.24:0,75,2689	1/1:11,29:40:69.24:1794,69,0	0/0:27,0:27:63.20:0,63,2553	0/0:32,0:32:87.30:0,87,3615	0/0:21,0:21:51.18:0,51,2005	1/1:12,13:25:39.04:928,39,0	1/1:7,13:20:36.08:880,36,0	1/1:12,19:31:26.79:695,27,0	0/0:31,0:31:69.24:0,69,2834	0/0:30,0:30:72.25:0,72,2873	0/0:51,0:51:99:0,147,5861	1/1:7,23:30:43.69:1536,44,0	1/1:10,27:37:81.26:2059,81,0	1/1:13,14:27:36.12:940,36,0	./.
chr10	55687183	.	A	AG	1390.61	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-1.226;DP=665;FS=0.646;HRun=1;HaplotypeScore=103.2653;InbreedingCoeff=0.9993;MQ=78.31;MQ0=0;MQRankSum=-2.631;QD=35.66;ReadPosRankSum=-4.416;VQSLOD=2.2210;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,144,1854	1/1:2,11:13:33.11:495,33,0	0/0:17,0:17:48.15:0,48,614	0/0:23,0:24:60.19:0,60,769	0/0:24,0:24:66.21:0,66,857	0/0:24,0:24:72.23:0,72,934	0/0:16,0:16:48.13:0,48,595	1/1:3,23:26:72.20:1018,72,0	0/0:22,0:22:66.18:0,66,815	0/0:26,0:26:72.23:0,72,930	0/0:10,0:10:30.10:0,30,389	0/0:29,0:29:87.28:0,87,1130	0/0:22,0:22:66.21:0,66,857	0/0:24,0:24:72.20:0,72,905	0/0:26,0:26:75.24:0,75,974	0/0:22,0:22:66.20:0,66,843	0/0:31,0:31:90.29:0,90,1169	0/0:20,0:20:60.15:0,60,758	0/0:20,0:20:57.18:0,57,740	0/0:27,0:27:78.21:0,78,977	0/0:34,0:34:96.15:0,96,1176	0/0:30,0:30:80.94:0,81,1037	0/0:15,0:15:42.14:0,42,545	0/0:20,0:20:60.20:0,60,779	0/0:10,0:10:30.10:0,30,390	0/0:31,0:31:93.29:0,93,1194	0/0:25,0:25:72.23:0,72,933	0/0:28,0:28:81.22:0,81,1018
chr10	55687883	.	T	TA	2588.40	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=11.702;DP=585;FS=0.768;HRun=10;HaplotypeScore=120.6059;InbreedingCoeff=0.8561;MQ=59.29;MQ0=4;MQRankSum=-11.609;QD=9.34;ReadPosRankSum=-0.060;VQSLOD=2.2515;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:34:60.65:0,61,567	0/0:7,0:7:3.62:0,4,16	0/0:23,0:14:24.27:0,24,153	0/0:24,0:19:33.85:0,34,288	0/0:44,0:45:99:0,122,985	1/1:26,1:26:44.18:252,44,0	1/1:16,0:16:20.21:108,20,0	0/1:24,0:24:29.37:29,0,55	1/1:18,0:17:31.93:175,32,0	1/1:28,0:28:64.23:439,64,0	1/1:19,0:18:46.76:301,47,0	0/0:23,0:24:58.65:0,59,470	0/0:12,0:12:35.56:0,36,280	0/0:21,1:23:23.98:0,24,391	1/1:15,1:16:17.44:96,17,0	1/1:5,12:17:5.83:264,6,0	0/0:17,0:18:43.98:0,44,351	0/0:21,1:21:24.94:0,25,411	1/1:14,0:13:22.89:164,23,0	1/1:18,0:19:16.21:180,16,0	1/1:6,0:6:2.90:16,3,0	0/0:16,0:17:49.98:0,50,400	0/0:35,0:35:73.93:0,74,673	0/0:22,0:22:53.93:0,54,443	1/1:20,0:20:34.74:188,35,0	1/1:21,1:22:49.92:332,50,0	1/1:24,0:23:40.33:219,40,0	1/1:7,0:6:9.18:48,9,0
chr10	55687889	.	A	AAAAAAC	13750.08	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=1.575;DP=631;FS=0.000;HRun=0;HaplotypeScore=137.8254;InbreedingCoeff=0.7408;MQ=63.12;MQ0=4;MQRankSum=-10.222;QD=41.54;ReadPosRankSum=0.552;VQSLOD=4.5088;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:35:73.03:0,73,1452	0/0:5,0:5:11.71:0,12,121	0/0:35,0:22:6.45:0,6,245	0/1:30,0:22:34:34,0,372	0/0:44,0:44:99:0,126,2321	1/1:3,23:26:48.16:1539,48,0	1/1:2,12:14:21.07:659,21,0	0/1:22,0:22:16.54:17,0,224	1/1:0,20:19:33.11:1092,33,0	1/1:2,21:28:78.22:1937,78,0	1/1:0,20:21:51.08:1402,51,0	0/0:25,0:25:62.78:0,63,1135	0/0:15,0:15:38.68:0,39,646	0/0:22,0:22:27.24:0,27,989	1/1:2,15:17:18.06:595,18,0	0/1:15,0:15:10.87:11,0,208	0/0:21,0:21:56.13:0,56,869	0/0:23,0:22:63.06:0,63,938	1/1:1,12:18:47.32:804,47,0	1/1:2,17:20:17.63:1256,18,0	1/1:0,3:4:3.01:99,3,0	0/0:19,0:19:56.14:0,56,892	0/0:33,0:33:96.23:0,96,1712	0/0:22,0:22:63.11:0,63,1000	1/1:1,18:20:36.12:1170,36,0	1/1:2,20:26:67.26:1484,67,0	1/1:1,26:36:42.14:1352,42,0	1/1:4,4:10:9.50:299,10,0
chr10	55687893	.	AC	A	332.73	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=2.161;DP=629;FS=5.428;HRun=1;HaplotypeScore=135.7194;InbreedingCoeff=0.8646;MQ=65.25;MQ0=3;MQRankSum=-0.854;QD=11.88;ReadPosRankSum=-3.553;VQSLOD=0.9069;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:88.75:0,89,1057	1/1:1,4:5:12.49:124,12,0	0/0:39,0:27:42.66:0,43,530	0/0:31,0:23:40.14:0,40,509	0/0:46,0:46:99:0,131,1609	0/0:26,0:25:34.07:0,34,243	0/0:10,0:11:15.42:0,15,72	1/1:17,6:23:36.90:326,37,0	0/0:20,0:19:22.95:0,23,129	0/0:25,0:25:64.33:0,64,377	0/0:22,0:22:51.54:0,52,259	0/0:24,0:24:43.77:0,44,737	0/0:16,0:16:26.19:0,26,459	0/0:23,0:23:58.91:0,59,680	0/0:17,0:17:19.61:0,20,92	0/0:15,0:15:34.59:0,35,243	0/0:24,0:24:59.71:0,60,650	0/0:23,0:22:62.93:0,63,688	0/0:17,0:16:36.01:0,36,243	0/0:21,0:21:42.10:0,42,200	0/0:5,0:5:2.79:0,3,13	0/0:19,0:19:53.48:0,53,631	0/0:32,0:32:96.01:0,96,1148	0/0:24,0:24:65.37:0,65,750	0/0:17,0:17:33.47:0,33,152	0/0:24,0:24:47.34:0,47,306	0/0:38,0:37:47.49:0,47,239	0/0:7,0:7:8.34:0,8,37
chr10	55687895	.	AAAAC	A	199.84	PASS	AB=0.736;AC=2;AF=0.036;AN=56;BaseQRankSum=3.051;DP=638;FS=11.817;HRun=0;HaplotypeScore=168.4146;InbreedingCoeff=0.2315;MQ=67.92;MQ0=3;MQRankSum=-2.344;QD=7.40;ReadPosRankSum=-1.735;VQSLOD=2.0385;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:89.33:0,89,2183	0/1:2,3:5:2.99:91,0,3	0/0:41,0:29:23.41:0,23,1240	0/0:31,0:23:51.42:0,51,1014	0/0:47,0:47:99:0,132,3325	0/0:26,0:25:53.93:0,54,1305	0/0:12,0:12:27.09:0,27,569	0/1:18,4:22:31.21:197,0,31	0/0:20,0:19:25.47:0,25,816	0/0:26,0:26:78.10:0,78,1818	0/0:24,0:24:60.93:0,61,1291	0/0:24,0:24:65.96:0,66,1589	0/0:16,0:16:45.12:0,45,1013	0/0:23,0:23:60.14:0,60,1481	0/0:17,0:17:24.08:0,24,522	0/0:15,0:15:39.05:0,39,929	0/0:25,0:25:63.21:0,63,1516	0/0:23,0:22:60.16:0,60,1376	0/0:16,0:15:39.13:0,39,893	0/0:20,0:20:45.15:0,45,1051	0/0:6,0:6:9.03:0,9,141	0/0:19,0:19:54.18:0,54,1325	0/0:32,0:32:93.32:0,93,2425	0/0:24,0:24:69.19:0,69,1615	0/0:18,0:18:39.13:0,39,937	0/0:24,0:24:66.13:0,66,1428	0/0:40,0:39:57.19:0,57,1258	0/0:8,0:8:12.04:0,12,258
chr10	55689478	.	TA	T	5607.09	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=13.460;DP=492;FS=6.048;HRun=10;HaplotypeScore=82.9527;InbreedingCoeff=0.9461;MQ=65.58;MQ0=6;MQRankSum=1.091;QD=20.32;ReadPosRankSum=1.693;VQSLOD=5.7970;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:34:67.13:0,67,869	1/1:1,5:6:14.99:126,15,0	0/0:27,1:10:25.07:0,25,219	0/0:17,0:9:9.29:0,9,79	0/0:26,0:26:69.17:0,69,754	1/1:2,21:23:59.99:520,60,0	1/1:1,7:8:21:182,21,0	1/1:11,15:22:26.80:355,27,0	1/1:2,9:11:26.99:234,27,0	1/1:2,18:20:53.99:468,54,0	1/1:1,16:16:44.99:390,45,0	0/0:17,0:17:47.67:0,48,486	0/0:13,0:13:36.10:0,36,398	0/0:8,0:8:15.04:0,15,166	1/1:0,12:12:32.99:286,33,0	0/0:13,0:13:36.10:0,36,398	0/0:21,0:20:54.15:0,54,596	0/0:22,0:22:57.05:0,57,590	1/1:8,17:25:57.46:478,57,0	1/1:3,23:26:68.96:594,69,0	1/1:5,7:11:20.96:179,21,0	0/0:1,0:1:3.01:0,3,33	0/0:9,0:11:20.89:0,21,213	0/0:4,0:4:6.02:0,6,66	1/1:4,19:23:56.98:495,57,0	1/1:4,17:20:47.98:416,48,0	1/1:4,34:38:83.76:726,84,0	1/1:1,6:7:17.99:156,18,0
chr10	55689489	.	GA	G	654.52	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-0.735;DP=506;FS=4.677;HRun=10;HaplotypeScore=100.5623;InbreedingCoeff=0.8796;MQ=68.88;MQ0=6;MQRankSum=-4.218;QD=18.70;ReadPosRankSum=-3.260;VQSLOD=2.6455;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:34:71.94:0,72,921	1/1:3,5:8:24.03:227,24,0	0/0:29,0:14:18.13:0,18,277	0/0:14,0:9:9.50:0,9,109	0/0:26,0:26:72.21:0,72,860	0/0:29,0:29:83.74:0,84,737	0/0:8,0:8:23.71:0,24,183	1/1:5,22:25:44.86:548,45,0	0/0:10,0:10:22.87:0,23,156	0/0:22,0:22:63.14:0,63,655	0/0:19,0:18:52.98:0,53,408	0/0:19,0:19:48.13:0,48,565	0/0:16,0:16:48.05:0,48,537	0/0:7,0:7:15.05:0,15,179	0/0:15,0:14:40.67:0,41,305	0/0:17,0:17:48.09:0,48,546	0/0:20,0:19:51.15:0,51,604	0/0:23,0:23:54.16:0,54,641	0/0:25,0:24:53.12:0,53,501	0/0:26,0:26:70.96:0,71,575	0/0:8,0:8:20.73:0,21,163	0/0:2,0:2:6.02:0,6,72	0/0:12,0:12:30.09:0,30,360	0/0:5,0:5:9.03:0,9,106	0/0:23,0:23:68.59:0,69,559	0/0:18,0:18:50.07:0,50,468	0/0:36,0:36:89.39:0,89,745	0/0:6,0:6:17.76:0,18,132
chr10	55692774	.	G	GAAAA	6962.75	PASS	AB=0.962;AC=31;AF=0.554;AN=56;BaseQRankSum=-0.819;DP=523;FS=6.732;HRun=11;HaplotypeScore=95.7754;InbreedingCoeff=0.8840;MQ=60.22;MQ0=6;MQRankSum=-5.413;QD=26.18;ReadPosRankSum=-7.365;VQSLOD=1.4815;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:35:82.80:0,83,1073	1/1:3,6:10:11.88:264,12,0	0/1:23,0:14:22.71:23,0,171	0/0:18,0:13:21.19:0,21,260	0/0:24,0:24:48.02:0,48,650	1/1:4,10:15:18.02:367,18,0	1/1:2,5:12:23.99:405,24,0	1/1:13,11:27:65.90:995,66,0	1/1:5,6:13:15.05:315,15,0	1/1:13,10:28:51.06:811,51,0	1/1:5,13:20:24.04:411,24,0	0/0:16,0:18:45.04:0,45,562	0/0:6,0:6:15:0,15,204	0/0:21,0:23:42.96:0,43,504	1/1:8,6:15:9.03:207,9,0	0/0:13,0:13:29.96:0,30,401	0/0:31,0:37:77.62:0,78,977	0/0:22,0:24:60.15:0,60,800	1/1:12,6:18:32.80:510,33,0	1/1:10,7:18:30:469,30,0	1/1:2,1:3:3.01:54,3,0	0/0:14,0:14:32.99:0,33,415	0/0:18,0:20:34.21:0,34,434	0/0:18,0:19:51.02:0,51,637	1/1:2,10:15:24.08:512,24,0	1/1:10,8:18:32.89:588,33,0	1/1:5,6:12:21.07:483,21,0	1/1:3,8:12:24.08:549,24,0
chr10	55693465	.	AT	A	6155.15	PASS	AB=0.889;AC=31;AF=0.554;AN=56;BaseQRankSum=10.991;DP=631;FS=18.371;HRun=11;HaplotypeScore=64.4018;InbreedingCoeff=0.9193;MQ=70.62;MQ0=0;MQRankSum=-0.117;QD=17.64;ReadPosRankSum=-0.110;VQSLOD=3.9203;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:50,1:51:99:0,102,1231	1/1:2,4:6:11.97:99,12,0	0/0:7,0:7:12.02:0,12,118	0/0:10,0:10:9.10:0,9,99	0/0:21,0:21:48.10:0,48,498	1/1:4,11:15:29.95:246,30,0	1/1:5,25:30:59.90:493,60,0	1/1:7,22:29:62.89:513,63,0	1/1:6,20:27:61.94:498,62,0	1/1:6,26:32:68.88:566,69,0	1/1:3,11:15:29.94:246,30,0	0/0:32,0:32:90.19:0,90,934	0/0:12,0:12:27.04:0,27,274	0/0:22,0:22:48.59:0,49,513	1/1:2,22:24:56.83:468,57,0	0/0:19,1:21:32.29:0,32,521	0/0:24,2:30:25.45:0,25,618	0/0:23,0:23:29.86:0,30,490	1/1:3,20:23:59.91:490,60,0	1/1:4,23:27:62.03:516,62,0	1/1:3,17:20:44.93:369,45,0	0/0:18,0:18:36.55:0,37,378	0/1:13,2:16:7.39:7,0,298	0/0:31,1:35:59.39:0,59,814	1/1:1,12:13:23.97:197,24,0	1/1:7,29:35:57.90:682,58,0	1/1:2,26:28:77.89:640,78,0	1/1:3,5:8:14.97:123,15,0
chr10	55694808	.	C	CAA	10673.56	PASS	AB=0.917;AC=31;AF=0.554;AN=56;BaseQRankSum=-8.975;DP=486;FS=0.768;HRun=7;HaplotypeScore=51.5958;InbreedingCoeff=0.8884;MQ=60.28;MQ0=10;MQRankSum=-1.413;QD=36.55;ReadPosRankSum=0.398;VQSLOD=4.3256;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:90.23:0,90,1034	1/1:1,0:8:24.04:242,24,0	0/0:13,0:4:8.65:0,9,67	0/0:10,0:1:3.01:0,3,35	0/0:21,0:20:54.15:0,54,629	1/1:0,18:18:48.16:788,48,0	1/1:1,6:7:18.06:294,18,0	1/1:10,0:31:72.12:717,72,0	1/1:1,12:13:27.09:443,27,0	1/1:1,27:29:87.27:1349,87,0	1/1:3,15:17:45.15:726,45,0	0/0:9,0:9:24.06:0,24,269	0/0:18,0:18:54.16:0,54,628	0/0:8,0:8:21.04:0,21,233	1/1:1,13:14:33.11:542,33,0	0/1:10,1:11:16.16:16,0,306	0/0:27,0:27:66.16:0,66,756	0/0:26,0:26:63.15:0,63,720	1/1:5,15:21:44.58:642,45,0	1/1:3,16:19:42.11:659,42,0	1/1:1,4:5:12.04:197,12,0	0/0:9,0:9:27.07:0,27,304	0/0:6,0:6:18.04:0,18,198	0/0:13,0:13:36.10:0,36,419	1/1:0,16:16:48.16:788,48,0	1/1:5,22:27:63.18:997,63,0	1/1:4,22:27:63.22:1034,63,0	1/1:0,25:26:77.75:1240,78,0
chr10	55697992	.	AT	A	7294.54	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=11.008;DP=444;FS=0.000;HRun=7;HaplotypeScore=48.1424;InbreedingCoeff=0.9493;MQ=64.10;MQ0=1;MQRankSum=0.241;QD=26.33;ReadPosRankSum=-0.949;VQSLOD=4.8058;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:63.19:0,63,780	1/1:0,8:8:18.04:184,18,0	0/0:5,0:4:12.02:0,12,137	0/0:10,0:10:5.22:0,5,237	0/0:21,0:21:48.15:0,48,592	1/1:1,23:24:54.12:551,54,0	1/1:2,10:12:27.06:275,27,0	1/1:2,28:30:81.18:826,81,0	1/1:0,13:13:39.09:398,39,0	1/1:2,26:28:78.18:796,78,0	1/1:1,24:25:66.15:673,66,0	0/0:5,0:5:15.05:0,15,189	0/0:12,0:12:36.10:0,36,439	0/0:8,0:8:21.05:0,21,251	1/1:2,14:16:42.09:429,42,0	0/0:11,0:11:30.10:0,30,377	0/0:23,0:23:49.24:0,49,723	0/0:24,0:24:60.19:0,60,752	1/1:4,19:23:57.11:571,57,0	1/1:2,18:20:51.04:507,51,0	1/1:2,8:10:24.05:245,24,0	0/0:3,0:3:3.01:0,3,38	0/0:16,0:16:42.04:0,42,495	0/0:7,0:7:18.06:0,18,226	1/1:0,13:13:39.09:398,39,0	1/1:2,20:22:60.05:584,60,0	1/1:4,21:25:60.13:612,60,0	1/1:0,8:8:24.05:245,24,0
chr10	55698192	.	AT	A	2964.75	PASS	AB=0.778;AC=23;AF=0.411;AN=56;BaseQRankSum=6.361;DP=429;FS=4.279;HRun=11;HaplotypeScore=49.0518;InbreedingCoeff=0.8402;MQ=68.20;MQ0=1;MQRankSum=-1.388;QD=16.85;ReadPosRankSum=3.394;VQSLOD=4.4986;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,32:35:86.89:714,87,0	1/1:0,3:3:8.98:73,9,0	0/0:12,0:11:5.08:0,5,74	0/0:19,0:12:13.89:0,14,86	1/1:3,12:15:32.91:266,33,0	0/0:16,0:17:47.95:0,48,494	0/0:16,0:16:39.08:0,39,408	1/1:6,14:18:43.91:342,44,0	0/0:18,0:18:54.06:0,54,555	0/0:10,0:10:30.07:0,30,315	0/1:5,2:7:14.46:14,0,136	1/1:1,15:16:38.95:320,39,0	0/0:10,1:11:8.44:0,8,295	0/0:11,0:11:27.07:0,27,286	0/0:20,0:20:54.10:0,54,550	1/1:0,10:10:26.97:222,27,0	1/1:5,21:26:56.91:464,57,0	1/1:4,13:17:8.18:240,8,0	0/0:14,0:14:33.06:0,33,331	0/0:10,0:10:30.08:0,30,319	0/0:29,0:29:81.18:0,81,850	1/1:0,1:2:3:25,3,0	1/1:1,1:3:8.03:55,8,0	1/1:1,21:22:53.94:443,54,0	0/0:10,0:10:27.07:0,27,288	0/0:16,1:17:11.42:0,11,303	0/0:26,0:26:60.11:0,60,627	0/0:11,0:12:32.91:0,33,327
chr10	55698405	.	G	GA	683.05	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=-2.250;DP=272;FS=5.302;HRun=8;HaplotypeScore=27.5389;InbreedingCoeff=0.6090;MQ=51.95;MQ0=21;MQRankSum=-6.508;QD=13.66;ReadPosRankSum=-2.873;VQSLOD=1.4769;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:12:26.03:0,26,221	1/1:0,5:5:9.03:104,9,0	0/0:17,0:2:6:0,6,55	0/1:17,0:7:2.51:3,0,66	0/0:15,0:15:26.99:0,27,242	0/0:8,0:8:21.01:0,21,192	0/0:2,0:2:3:0,3,27	1/1:5,23:25:60.18:692,60,0	0/0:6,0:6:18.01:0,18,165	0/0:6,0:6:14.99:0,15,133	0/0:11,0:11:24.01:0,24,220	0/0:8,0:8:18:0,18,165	0/0:4,0:4:12.01:0,12,110	0/0:5,0:5:12:0,12,110	0/0:9,0:9:24:0,24,215	0/0:7,0:7:18.01:0,18,165	0/0:14,0:14:33.02:0,33,302	0/0:10,0:9:23.97:0,24,211	0/0:11,0:9:15:0,15,137	0/0:12,0:12:30.01:0,30,275	0/0:2,0:2:2.99:0,3,27	0/0:9,0:9:24.01:0,24,220	0/0:10,0:10:24:0,24,215	0/0:5,0:5:15.01:0,15,137	0/0:7,0:6:18:0,18,161	0/0:6,0:5:9:0,9,82	0/0:13,0:13:29.96:0,30,265	0/0:13,0:11:33.02:0,33,302
chr10	55698422	.	A	AT	132.91	PASS	AB=0.925;AC=8;AF=0.148;AN=54;BaseQRankSum=7.143;DP=247;FS=19.661;HRun=0;HaplotypeScore=33.0428;InbreedingCoeff=0.0341;MQ=52.70;MQ0=7;MQRankSum=-5.080;QD=1.28;ReadPosRankSum=-1.684;VQSLOD=-0.0515;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:9,2:11:38.81:39,0,267	1/1:3,0:4:5.62:26,6,0	0/0:12,0:3:3.44:0,3,79	0/0:14,0:7:15.51:0,16,199	0/1:9,1:10:0.01:0,0,290	0/0:9,0:9:3.06:0,3,255	./.	0/1:45,0:28:99:116,0,126	0/0:6,0:6:18.04:0,18,232	0/0:3,0:3:9.03:0,9,126	0/0:8,0:8:24.07:0,24,307	0/1:5,1:6:23.12:23,0,125	0/0:4,0:4:12.04:0,12,168	0/0:3,0:3:9.02:0,9,109	0/0:7,0:7:21.06:0,21,278	0/0:5,0:5:15.05:0,15,210	0/1:13,0:13:0.28:0,0,363	0/1:14,1:14:45.64:46,0,302	0/0:11,0:10:30.05:0,30,368	0/0:9,0:9:27.07:0,27,342	0/0:2,0:2:6.02:0,6,83	0/0:6,0:6:18.06:0,18,252	0/0:5,0:5:15.05:0,15,209	0/0:4,0:4:12.03:0,12,149	0/0:8,0:8:24.08:0,24,335	0/0:2,0:2:3.01:0,3,42	0/0:7,0:7:21.06:0,21,277	0/0:18,0:18:54.03:0,54,711
chr10	55698431	.	A	AAAATAAATAAAT	1563.13	PASS	AB=1.000;AC=16;AF=0.400;AN=40;BaseQRankSum=6.450;DP=218;FS=6.217;HRun=0;HaplotypeScore=72.3148;InbreedingCoeff=0.5093;MQ=52.57;MQ0=5;MQRankSum=-6.857;QD=12.92;ReadPosRankSum=-3.142;VQSLOD=0.1991;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:7,0:7:9.03:265,9,0	1/1:4,0:4:5.98:109,6,0	./.	./.	1/1:8,0:8:3.01:117,3,0	0/1:10,0:10:7.87:8,0,456	./.	1/1:43,0:26:53.57:458,54,0	0/0:5,0:5:6.02:0,6,135	0/0:3,0:3:6.01:0,6,129	./.	1/1:4,0:4:6.01:156,6,0	0/0:2,0:2:3.01:0,3,103	0/0:4,0:3:6.02:0,6,144	0/0:6,0:6:9.03:0,9,247	0/0:5,0:5:9.02:0,9,222	1/1:11,6:18:6.02:348,6,0	1/1:13,0:14:12.04:243,12,0	0/1:13,0:12:3.98:4,0,301	0/0:7,0:7:3.01:0,3,42	0/0:2,0:2:6.02:0,6,196	./.	./.	./.	0/0:8,0:8:12.04:0,12,350	./.	0/0:5,0:5:3.01:0,3,91	0/0:17,0:17:42.14:0,42,1316
chr10	55698811	.	AGTGT	A	2207.49	PASS	AB=1.000;AC=28;AF=0.519;AN=54;BaseQRankSum=-0.688;DP=449;FS=1.574;HRun=0;HaplotypeScore=82.8407;InbreedingCoeff=0.7070;MQ=66.88;MQ0=6;MQRankSum=-1.051;QD=8.79;ReadPosRankSum=0.239;VQSLOD=2.5249;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:13,0:17:6.98:7,0,89	0/0:3,0:6:8.96:0,9,169	./.	0/1:15,0:12:0:0,0,0	0/0:11,0:20:6.40:0,6,160	1/1:9,10:20:18.05:262,18,0	1/1:11,4:15:9.03:140,9,0	0/0:23,0:22:18.04:0,18,245	1/1:13,3:16:3.86:133,4,0	1/1:13,7:20:11.62:150,12,0	1/1:10,5:15:18.05:260,18,0	0/0:17,0:20:36.11:0,36,686	0/0:4,0:8:6.02:0,6,105	0/0:4,0:8:6.02:0,6,116	1/1:11,13:28:14.44:306,14,0	0/0:10,0:16:13.72:0,14,61	0/0:14,0:23:6.02:0,6,105	0/0:9,0:14:6.02:0,6,105	1/1:11,4:14:9.01:99,9,0	1/1:2,5:8:15.04:215,15,0	1/1:13,8:21:3.01:47,3,0	0/0:7,0:7:3.01:0,3,37	0/0:10,0:13:14.71:0,15,207	0/0:16,0:17:12.04:0,12,198	1/1:8,1:10:14.97:167,15,0	1/1:10,7:17:15.02:211,15,0	1/1:8,10:18:18.06:281,18,0	1/1:9,3:13:9.02:122,9,0
chr10	55700452	.	A	AG	5781.70	PASS	AB=0.632;AC=25;AF=0.446;AN=56;BaseQRankSum=-5.617;DP=508;FS=7.839;HRun=8;HaplotypeScore=59.9979;InbreedingCoeff=0.9027;MQ=75.56;MQ0=0;MQRankSum=-0.772;QD=24.09;ReadPosRankSum=-0.258;VQSLOD=5.2236;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:59.96:0,60,542	0/0:0,0:7:12:0,12,35	0/0:17,0:17:38.69:0,39,338	0/0:10,0:10:2.37:0,2,8	0/0:18,0:18:42.01:0,42,384	1/1:0,10:10:30.08:337,30,0	1/1:6,23:29:51.15:589,51,0	0/0:6,0:23:20.22:0,20,62	1/1:1,10:11:24.07:277,24,0	1/1:6,14:20:42.12:484,42,0	1/1:2,15:17:36.11:415,36,0	0/0:15,0:15:42.02:0,42,384	0/0:13,0:13:24:0,24,219	0/0:26,0:26:66.02:0,66,604	1/1:2,17:19:45.13:519,45,0	0/0:12,0:12:33.02:0,33,302	0/0:28,0:28:65.99:0,66,599	0/0:17,0:17:45.01:0,45,412	1/1:5,13:18:14.66:422,15,0	1/1:2,10:12:21.06:242,21,0	1/1:6,26:31:72.21:831,72,0	0/0:21,0:21:45.01:0,45,412	0/0:10,0:10:27.01:0,27,247	0/0:20,0:20:54:0,54,489	1/1:3,17:20:39.12:450,39,0	1/1:2,17:19:48.13:545,48,0	1/1:9,12:21:45.13:515,45,0	0/1:5,7:12:9.41:155,0,9
chr10	55700784	.	A	ACCG	10828.22	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=17.533;DP=594;FS=12.817;HRun=0;HaplotypeScore=174.1026;InbreedingCoeff=0.9709;MQ=87.25;MQ0=0;MQRankSum=-17.534;QD=41.33;ReadPosRankSum=1.986;VQSLOD=5.7513;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,120,2042	1/1:7,0:7:18.06:300,18,0	0/0:28,0:28:72.22:0,72,1191	0/0:27,0:27:72.18:0,72,1128	0/0:34,0:34:90.28:0,90,1467	1/1:24,0:24:66.22:1057,66,0	1/1:23,0:23:60.03:950,60,0	1/1:24,0:24:60.20:1088,60,0	1/1:25,0:25:63.21:980,63,0	1/1:24,1:25:69.23:1100,69,0	1/1:9,1:10:13.72:426,14,0	0/0:27,0:27:81.23:0,81,1325	0/0:27,0:27:78.25:0,78,1303	0/0:22,0:22:66.23:0,66,1123	1/1:18,0:18:48.16:780,48,0	0/0:23,0:23:63.22:0,63,1075	0/0:16,0:16:48.16:0,48,818	0/0:22,0:22:66.23:0,66,1117	1/1:15,0:16:48.15:874,48,0	1/1:7,0:7:9.03:177,9,0	1/1:12,0:12:14.89:250,15,0	0/0:21,0:21:60.21:0,60,1023	0/0:20,0:20:51.16:0,51,842	0/0:25,0:25:63.22:0,63,1075	1/1:3,2:5:6.02:125,6,0	1/1:22,0:22:60.20:1056,60,0	1/1:32,0:32:81.27:1319,81,0	1/1:12,0:12:21.07:346,21,0
chr10	55700786	.	C	CGCCTTAGCTGCTT	37041.95	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-10.279;DP=578;FS=18.846;HRun=0;HaplotypeScore=178.6064;InbreedingCoeff=0.9832;MQ=88.56;MQ0=0;MQRankSum=-15.636;QD=148.76;ReadPosRankSum=1.770;VQSLOD=4.3122;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,120,4891	1/1:1,3:6:12.04:743,12,0	0/0:26,0:26:78.22:0,78,2753	0/0:27,0:27:72.21:0,72,2476	0/0:34,0:34:99:0,99,3400	1/1:4,16:22:57.20:3730,57,0	1/1:6,13:20:57.20:3715,57,0	1/1:9,3:18:48.15:2054,48,0	1/1:6,16:29:69.24:4317,69,0	1/1:5,14:23:60.21:3587,60,0	1/1:2,7:11:30.06:1687,30,0	0/0:27,0:27:81.24:0,81,3162	0/0:28,0:28:84.25:0,84,3103	0/0:22,0:22:66.23:0,66,2562	1/1:5,11:19:48.16:3041,48,0	0/0:23,0:23:66.23:0,66,2613	0/0:16,0:16:48.16:0,48,1897	0/0:22,0:22:66.23:0,66,2662	1/1:4,7:17:51.09:2316,51,0	1/1:0,2:7:8.99:263,9,0	1/1:6,5:15:27.05:1510,27,0	0/0:21,0:21:63.17:0,63,2518	0/0:19,0:19:51.16:0,51,1991	0/0:23,0:23:66.23:0,66,2691	1/1:5,0:5:15.05:653,15,0	1/1:2,11:15:42.14:2749,42,0	1/1:9,20:32:90.27:5661,90,0	1/1:0,5:10:15.05:1016,15,0
chr10	55702626	.	TG	T	1324.67	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.058;DP=588;FS=3.573;HRun=1;HaplotypeScore=60.1512;InbreedingCoeff=0.9986;MQ=67.97;MQ0=2;MQRankSum=1.156;QD=30.11;ReadPosRankSum=-2.451;VQSLOD=2.7349;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:69.12:0,69,829	1/1:3,12:15:39.35:538,39,0	0/0:36,0:19:26.32:0,26,457	0/0:32,0:27:38.56:0,39,496	0/0:17,0:17:51.15:0,51,643	0/0:28,0:28:74.24:0,74,1014	0/0:12,0:12:36.08:0,36,442	1/1:3,26:29:72.80:908,73,0	0/0:20,0:20:60.15:0,60,766	0/0:30,0:30:80.35:0,80,929	0/0:19,0:19:57.14:0,57,737	0/0:13,0:13:39.03:0,39,460	0/0:20,0:20:60.17:0,60,767	0/0:16,0:16:48.14:0,48,609	0/0:18,0:18:54.16:0,54,698	0/0:11,0:11:30.08:0,30,377	0/0:37,0:37:99:0,111,1393	0/0:31,0:31:90.16:0,90,1099	0/0:21,0:21:63.08:0,63,762	0/0:20,0:20:60.20:0,60,791	0/0:20,0:20:60.07:0,60,720	0/0:13,0:13:36.07:0,36,427	0/0:16,0:16:48.14:0,48,613	0/0:19,0:19:57.13:0,57,698	0/0:12,0:12:33.09:0,33,416	0/0:33,0:33:96.17:0,96,1161	0/0:14,0:14:42.07:0,42,531	0/0:11,0:11:33.11:0,33,438
chr10	55704752	.	GCTCTCTCT	G	393.63	PASS	AC=8;AF=0.174;AN=46;BaseQRankSum=2.135;DP=558;FS=0.000;HRun=0;HaplotypeScore=171.0190;InbreedingCoeff=0.6856;MQ=76.11;MQ0=20;MQRankSum=-0.999;QD=4.74;ReadPosRankSum=-0.848;VQSLOD=2.2956;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:8,7:18:0.47:0,0,1	./.	1/1:32,0:23:4.41:15,4,0	0/0:45,0:23:3.89:0,4,40	0/0:6,3:15:0.44:0,0,1	0/0:22,0:22:21.05:0,21,685	0/0:18,0:21:27.09:0,27,800	./.	0/0:23,0:26:23.89:0,24,761	0/0:20,0:23:42.14:0,42,1363	./.	1/1:6,7:15:12.04:262,12,0	0/0:7,0:7:9.03:0,9,194	0/0:9,0:15:12.01:0,12,205	0/0:26,0:26:39.59:0,40,1339	0/0:20,0:20:33.10:0,33,1095	1/1:13,3:16:7.89:215,8,0	./.	0/0:18,0:20:33.11:0,33,1245	0/0:20,0:20:13.40:0,13,347	0/0:13,0:13:9.03:0,9,268	0/0:14,8:23:0.47:0,0,1	1/1:13,4:20:2.86:24,3,0	./.	0/0:18,0:19:6.91:0,7,200	0/0:18,0:22:30.10:0,30,1081	0/0:21,0:24:24.95:0,25,602	0/0:14,0:13:15.05:0,15,378
chr10	55704799	.	GACAC	G	953.69	PASS	AB=0.934;AC=31;AF=0.620;AN=50;BaseQRankSum=-0.055;DP=516;FS=6.800;HRun=0;HaplotypeScore=123.6429;InbreedingCoeff=0.0123;MQ=38.39;MQ0=41;MQRankSum=2.032;QD=2.63;ReadPosRankSum=2.272;VQSLOD=1.9493;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:19,2:21:5.34:91,5,0	1/1:6,0:6:1.82:5,2,0	./.	./.	1/1:21,0:20:3.01:34,3,0	0/1:18,3:20:69.36:78,0,69	1/1:10,3:13:3:46,3,0	0/0:14,0:16:0.47:0,0,1	0/1:24,1:24:36.45:36,0,96	0/1:19,1:18:27.24:39,0,27	1/1:13,0:13:3.01:46,3,0	1/1:15,6:22:8.92:138,9,0	0/0:9,0:9:2.60:0,3,10	0/1:20,1:21:21.96:22,0,370	0/1:26,0:25:1.44:1,0,125	0/1:17,0:17:2.80:3,0,301	0/1:11,3:13:4.70:83,0,5	0/1:10,0:8:16.56:37,0,17	0/0:20,0:18:6.02:0,6,140	0/0:11,0:12:2.39:0,2,21	1/1:14,0:17:2.98:22,3,0	1/1:21,1:23:2.87:45,3,0	1/1:17,4:22:9.03:139,9,0	./.	1/1:10,2:13:6.02:92,6,0	0/1:16,1:17:33.98:34,0,95	1/1:12,4:16:8.76:104,9,0	0/0:11,0:10:20.86:0,21,303
chr10	55705365	.	AGATGGATGGTT	A	2430.20	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=0.746;DP=796;FS=0.655;HRun=0;HaplotypeScore=290.7546;InbreedingCoeff=0.9965;MQ=68.81;MQ0=0;MQRankSum=-4.941;QD=65.68;ReadPosRankSum=-3.840;VQSLOD=2.2367;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:40:99:0,108,5303	1/1:0,7:7:21.07:713,21,0	0/0:27,0:25:51.17:0,51,2064	0/0:30,0:29:63.21:0,63,2546	0/0:35,0:35:99:0,99,4886	0/0:16,0:16:41.63:0,42,1672	0/0:26,0:26:57.19:0,57,2218	1/1:4,26:30:78.06:1838,78,0	0/0:39,0:39:90.28:0,90,3760	0/0:22,0:22:60.21:0,60,2615	0/0:10,0:10:24.08:0,24,861	0/0:44,0:44:99:0,117,5702	0/0:24,0:24:66.23:0,66,3587	0/0:39,0:38:99:0,102,5577	0/0:42,0:42:99:0,102,4025	0/0:28,0:28:81.26:0,81,3947	0/0:37,0:37:99:0,102,5378	0/0:19,0:19:54.19:0,54,2562	0/0:27,0:27:69.19:0,69,2189	0/0:23,0:23:63.04:0,63,2442	0/0:58,0:58:99:0,166,6819	0/0:29,0:29:81.23:0,81,3713	0/0:14,0:14:29.70:0,30,1477	0/0:39,0:39:99:0,99,5082	0/0:18,0:18:42.13:0,42,1612	0/0:27,0:27:60.18:0,60,2206	0/0:33,0:33:84.27:0,84,3158	0/0:13,0:13:39.09:0,39,1604
chr10	55705376	.	T	TG	14468.25	PASS	AB=1.000;AC=27;AF=0.482;AN=56;BaseQRankSum=-16.523;DP=767;FS=0.554;HRun=1;HaplotypeScore=82.8002;InbreedingCoeff=0.9315;MQ=68.99;MQ0=0;MQRankSum=-1.605;QD=37.88;ReadPosRankSum=-0.094;VQSLOD=5.0727;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,117,1503	0/0:7,0:7:13.81:0,14,41	0/0:20,0:19:54.16:0,54,680	0/0:24,0:24:68.87:0,69,824	0/0:33,0:33:99:0,99,1284	1/1:0,18:18:48.16:715,48,0	1/1:0,27:27:66.22:988,66,0	0/1:30,0:30:10.17:140,0,10	1/1:2,33:35:90.30:1348,90,0	1/1:1,26:27:75.25:1122,75,0	1/1:0,9:9:24.08:359,24,0	0/0:39,1:40:99:0,111,1441	0/0:22,0:22:66.21:0,66,856	0/0:39,0:38:99:0,117,1497	1/1:1,41:42:99:1572,105,0	0/0:27,0:27:78.24:0,78,997	0/0:35,0:35:99:0,105,1362	0/0:22,0:22:60.19:0,60,771	1/1:2,23:25:72.24:1077,72,0	1/1:0,27:27:78.21:1133,78,0	1/1:1,57:58:99:2516,169,0	0/0:28,0:28:78.25:0,78,1012	0/0:13,0:13:30.06:0,30,389	0/0:35,0:35:99:0,105,1362	1/1:0,15:15:39.13:584,39,0	1/1:0,24:24:72.19:1030,72,0	1/1:0,32:32:90.30:1345,90,0	1/1:0,13:13:36.12:539,36,0
chr10	55706678	.	A	AAG	4737.89	PASS	AB=1.000;AC=27;AF=0.482;AN=56;BaseQRankSum=-8.513;DP=696;FS=8.771;HRun=0;HaplotypeScore=91.1828;InbreedingCoeff=0.8851;MQ=61.89;MQ0=39;MQRankSum=4.478;QD=13.73;ReadPosRankSum=2.907;VQSLOD=3.9009;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:46:99:0,119,1027	0/0:8,0:7:14.95:0,15,119	0/1:72,0:7:1.48:1,0,35	0/0:84,0:25:12.28:0,12,189	0/0:25,0:25:66.96:0,67,557	1/1:3,13:20:17.60:250,18,0	1/1:6,2:11:26.20:298,26,0	0/0:30,0:30:62.99:0,63,529	1/1:0,9:11:14.88:184,15,0	1/1:3,17:20:40.43:441,40,0	1/1:0,15:18:47.66:517,48,0	0/0:10,0:9:26.73:0,27,236	0/0:15,0:15:44.22:0,44,355	0/0:10,0:10:29.62:0,30,260	1/1:4,21:32:36.51:488,37,0	0/0:14,0:14:34.11:0,34,301	0/0:40,0:40:99:0,109,995	0/0:29,0:28:76.34:0,76,773	1/1:18,8:27:57.10:634,57,0	1/1:5,9:15:6.39:233,6,0	1/1:1,1:13:3.90:115,4,0	0/0:10,0:10:26.96:0,27,254	0/0:12,0:12:29.90:0,30,258	0/0:16,0:16:26.99:0,27,274	1/1:2,21:26:12.13:338,12,0	1/1:4,21:31:70.26:744,70,0	1/1:8,22:35:39.88:453,40,0	1/1:2,7:7:3.01:42,3,0
chr10	55708555	.	TG	T	4084.17	PASS	AB=0.944;AC=31;AF=0.554;AN=56;BaseQRankSum=-1.739;DP=410;FS=12.476;HRun=7;HaplotypeScore=63.5305;InbreedingCoeff=0.9283;MQ=74.32;MQ0=1;MQRankSum=-3.295;QD=18.82;ReadPosRankSum=-0.423;VQSLOD=2.0741;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:56.95:0,57,716	1/1:2,5:7:15.03:153,15,0	0/0:23,0:14:16.35:0,16,179	0/0:11,0:7:12.83:0,13,87	0/0:8,0:8:18.06:0,18,226	1/1:2,6:7:21.05:214,21,0	1/1:2,15:16:39.09:398,39,0	1/1:3,14:16:36.08:367,36,0	1/1:5,9:14:26.21:232,26,0	1/1:7,7:13:24.02:240,24,0	1/1:3,6:9:21.05:214,21,0	0/0:15,0:15:36.01:0,36,453	0/0:15,0:15:39.12:0,39,491	0/0:21,0:21:57.15:0,57,679	1/1:5,8:12:27.06:274,27,0	0/1:16,1:17:1.31:1,0,273	0/0:26,0:26:69.17:0,69,836	0/0:13,0:13:33.06:0,33,396	1/1:7,9:17:22.82:291,23,0	1/1:1,7:8:15.03:153,15,0	1/1:3,17:20:30.06:305,30,0	0/0:3,0:3:6.02:0,6,70	0/0:6,0:6:18.06:0,18,225	0/0:22,0:22:57.14:0,57,698	1/1:5,13:18:45.08:449,45,0	1/1:3,15:17:42.05:413,42,0	1/1:3,7:10:21.03:207,21,0	1/1:5,5:10:17.99:173,18,0
chr10	55708658	.	ACC	A	673.62	PASS	AC=16;AF=0.348;AN=46;BaseQRankSum=-2.453;DP=264;FS=7.102;HRun=10;HaplotypeScore=29.0910;InbreedingCoeff=0.6843;MQ=67.78;MQ0=44;MQRankSum=0.855;QD=11.23;ReadPosRankSum=3.768;VQSLOD=-0.0897;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:9:9.42:0,9,90	0/0:4,0:3:4.26:0,4,51	0/0:49,0:14:32.76:0,33,347	0/0:43,0:15:20.85:0,21,231	0/0:6,0:6:8.52:0,9,104	1/1:2,7:7:18.05:201,18,0	1/1:2,3:5:6.01:67,6,0	0/0:4,0:4:6.01:0,6,63	./.	1/1:4,6:9:12.01:134,12,0	1/1:3,4:7:9.02:100,9,0	./.	0/0:4,0:2:6.02:0,6,95	0/0:11,0:10:15.01:0,15,210	1/1:3,1:2:3.48:35,3,0	0/0:2,0:3:6:0,6,53	0/0:15,0:13:24.03:0,24,324	0/0:10,0:8:9.03:0,9,126	0/0:11,0:4:0:0,0,0	1/1:5,2:5:6.01:66,6,0	./.	0/0:4,0:4:5.98:0,6,67	./.	0/0:8,0:5:9.03:0,9,136	1/1:4,6:7:15.04:167,15,0	./.	1/1:6,2:4:3.48:63,3,0	0/0:2,0:1:0:0,0,0
chr10	55709258	.	GAAGA	G	14441.81	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=7.225;DP=626;FS=1.797;HRun=0;HaplotypeScore=108.7571;InbreedingCoeff=0.9826;MQ=62.20;MQ0=2;MQRankSum=1.820;QD=26.84;ReadPosRankSum=3.374;VQSLOD=4.5431;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,32:42:45.15:749,45,0	1/1:2,8:10:21.03:319,21,0	0/0:16,0:12:11.40:0,11,191	0/0:19,0:12:19.85:0,20,373	1/1:2,17:19:36.08:567,36,0	1/1:4,20:24:36.12:599,36,0	1/1:11,21:32:44.97:718,45,0	1/1:5,23:28:69.18:1061,69,0	1/1:7,18:26:27.09:431,27,0	1/1:7,19:26:60.20:993,60,0	1/1:3,10:13:33.11:535,33,0	1/1:7,14:21:21.07:349,21,0	0/0:19,0:19:51.16:0,51,1207	0/0:17,0:17:39:0,39,877	1/1:6,17:23:30.10:487,30,0	0/0:17,0:17:42.14:0,42,967	1/1:5,31:35:75.26:1248,75,0	1/1:15,19:34:30.10:499,30,0	1/1:3,9:12:24.07:363,24,0	1/1:3,11:14:33.11:525,33,0	1/1:2,24:26:42.03:668,42,0	1/1:2,16:18:23.89:337,24,0	1/1:3,17:20:35.99:599,36,0	1/1:5,29:34:66.03:1098,66,0	1/1:5,15:19:23.04:490,23,0	1/1:7,15:22:48.15:760,48,0	1/1:9,22:31:48.05:798,48,0	1/1:1,6:7:15.05:250,15,0
chr10	55710803	.	ATT	A	3712.93	PASS	AB=0.542;AC=19;AF=0.339;AN=56;BaseQRankSum=9.771;DP=503;FS=0.865;HRun=10;HaplotypeScore=57.0899;InbreedingCoeff=0.9000;MQ=65.16;MQ0=11;MQRankSum=-0.265;QD=19.54;ReadPosRankSum=3.826;VQSLOD=2.2240;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,24:26:51.13:567,51,0	1/1:1,4:5:9.02:100,9,0	0/0:19,0:9:20.44:0,20,217	0/0:14,0:8:18.04:0,18,207	1/1:5,19:24:42.08:467,42,0	0/0:9,0:9:24:0,24,304	0/0:17,0:18:50.62:0,51,733	1/1:4,18:22:54.08:586,54,0	0/0:12,0:12:30.10:0,30,473	0/0:20,0:21:54.15:0,54,760	0/0:23,0:24:53.25:0,53,766	1/1:4,13:14:30.07:334,30,0	0/0:9,0:9:26.95:0,27,377	0/0:19,0:19:45.11:0,45,666	0/0:11,0:11:33.10:0,33,495	0/0:17,0:16:45.05:0,45,637	1/1:8,36:39:77.87:869,78,0	1/1:6,14:17:36.09:401,36,0	0/0:26,0:28:80.57:0,81,1115	0/0:22,0:22:57.14:0,57,846	0/0:8,0:8:18.06:0,18,283	1/1:2,6:8:12.03:133,12,0	1/1:2,8:10:15.03:167,15,0	0/1:2,11:12:21.60:88,0,22	0/0:15,0:15:39.13:0,39,609	0/0:29,0:29:72.22:0,72,1059	0/0:24,0:24:63.19:0,63,956	0/0:13,0:13:21.06:0,21,314
chr10	55711326	.	G	GT	8261.91	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-15.515;DP=657;FS=9.876;HRun=5;HaplotypeScore=65.3535;InbreedingCoeff=0.9989;MQ=79.57;MQ0=0;MQRankSum=-1.134;QD=33.45;ReadPosRankSum=2.605;VQSLOD=5.1091;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,45:49:99:1618,123,0	1/1:2,9:11:27.09:355,27,0	0/0:22,0:23:39.31:0,39,446	0/0:22,0:22:41.66:0,42,449	1/1:4,23:27:66.16:848,66,0	0/0:20,0:20:57.14:0,57,612	0/0:26,0:26:72.18:0,72,774	1/1:8,17:25:51.15:654,51,0	0/0:21,0:21:60.15:0,60,645	0/0:24,0:24:63.15:0,63,671	0/0:12,0:12:30.07:0,30,322	1/1:1,23:24:66.21:868,66,0	0/0:27,0:27:78.20:0,78,838	0/0:29,0:29:84.19:0,84,893	0/0:22,0:22:66.17:0,66,709	0/0:38,0:38:99:0,105,1128	1/1:0,27:27:75.24:987,75,0	1/1:1,22:23:63.20:829,63,0	0/0:22,0:22:63.16:0,63,677	0/0:19,0:19:57.14:0,57,612	0/0:27,0:27:75.19:0,75,806	1/1:3,15:18:51.17:665,51,0	1/1:2,15:17:19.67:491,20,0	1/1:1,25:26:72.23:947,72,0	0/0:19,0:19:48.12:0,48,516	0/0:22,0:22:63.15:0,63,670	0/0:22,0:22:63.14:0,63,669	0/0:15,0:15:45.11:0,45,484
chr10	55712595	.	CT	C	1962.44	PASS	AB=0.688;AC=28;AF=0.500;AN=56;BaseQRankSum=-2.855;DP=373;FS=3.699;HRun=15;HaplotypeScore=53.7957;InbreedingCoeff=0.4381;MQ=60.50;MQ0=1;MQRankSum=5.052;QD=6.84;ReadPosRankSum=5.425;VQSLOD=2.4808;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:8,10:18:2.72:125,0,3	0/0:3,0:3:5.86:0,6,38	0/0:13,0:14:11.65:0,12,97	0/0:4,0:4:2.99:0,3,24	1/1:14,9:24:0.12:105,0,0	1/1:8,13:22:13.82:194,14,0	1/1:4,5:10:16.70:102,17,0	0/1:24,2:23:18.43:18,0,39	1/1:3,8:11:14.75:96,15,0	1/1:7,6:13:5.65:36,6,0	1/1:7,9:16:20.50:134,21,0	0/0:5,0:5:2.88:0,3,15	0/0:9,0:9:23.89:0,24,191	0/0:11,1:12:26.97:0,27,231	0/1:6,8:15:11.17:124,0,11	1/1:4,19:23:44.24:288,44,0	0/0:11,0:9:14.81:0,15,85	0/0:13,0:10:19.93:0,20,121	0/1:10,5:15:6.59:94,0,7	1/1:10,9:19:22.42:139,22,0	1/1:3,5:7:8.59:57,9,0	0/0:5,0:5:4.52:0,5,11	0/0:7,0:7:5.77:0,6,31	0/0:3,0:3:0:0,0,0	1/1:6,9:15:23.57:154,24,0	1/1:5,9:14:29.51:192,30,0	0/1:9,19:29:10.35:192,0,10	0/1:2,7:9:5.59:95,0,6
chr10	55712601	.	T	TAA	163.35	PASS	AB=0.796;AC=3;AF=0.054;AN=56;BaseQRankSum=-0.859;DP=384;FS=9.437;HRun=0;HaplotypeScore=63.9659;InbreedingCoeff=0.0584;MQ=58.58;MQ0=1;MQRankSum=-3.444;QD=3.80;ReadPosRankSum=-0.577;VQSLOD=0.8366;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:42.13:0,42,535	0/0:2,1:3:6.02:0,6,96	0/0:12,0:11:8.42:0,8,253	0/0:5,0:5:8.99:0,9,96	0/0:27,0:27:81.17:0,81,1056	0/0:23,0:23:63.19:0,63,803	0/0:10,0:10:30.09:0,30,360	0/1:12,7:16:99:193,0,381	0/0:12,0:12:27.08:0,27,346	0/0:15,0:15:42.12:0,42,552	0/0:21,0:21:60.16:0,60,765	0/0:2,0:2:6.02:0,6,85	0/0:10,0:10:30.10:0,30,480	0/0:12,0:12:36.12:0,36,570	0/0:16,0:16:45.14:0,45,581	0/0:25,0:25:63.18:0,63,759	0/1:9,2:9:44.24:44,0,104	0/1:10,3:10:25.14:25,0,249	0/0:15,0:15:45.14:0,45,604	0/0:20,0:20:57.18:0,57,750	0/0:9,0:8:23.44:0,23,287	0/0:3,0:3:9.03:0,9,123	0/0:5,0:5:15.05:0,15,219	0/0:2,0:2:0:0,0,0	0/0:17,0:17:48.08:0,48,588	0/0:17,0:17:48.14:0,48,596	0/0:31,0:31:84.25:0,84,1068	0/0:11,0:10:27.07:0,27,315
chr10	55713102	.	CA	C	282.95	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=7.795;DP=441;FS=2.976;HRun=3;HaplotypeScore=123.9595;InbreedingCoeff=0.4674;MQ=56.08;MQ0=4;MQRankSum=-4.045;QD=2.50;ReadPosRankSum=6.201;VQSLOD=0.0315;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:23,5:27:18.27:178,18,0	0/0:7,0:7:2.07:0,2,46	0/0:39,0:20:36.45:0,36,448	0/0:21,0:14:2.94:0,3,154	1/1:10,6:16:19.13:155,19,0	0/0:14,0:12:28.98:0,29,266	0/0:12,0:12:15.72:0,16,204	0/0:19,0:19:51.05:0,51,594	0/0:9,0:9:11.58:0,12,167	0/0:17,0:17:23.90:0,24,409	0/0:16,0:16:19.49:0,19,248	0/0:11,0:11:20.09:0,20,245	0/0:17,0:17:45.11:0,45,584	0/0:14,0:14:33.55:0,34,417	0/0:16,0:16:32.58:0,33,277	1/1:9,2:11:6.17:68,6,0	0/1:17,0:17:1.50:1,0,257	0/0:10,0:9:0.66:0,1,80	0/0:11,0:11:9.17:0,9,285	0/1:25,0:24:14.69:15,0,159	0/0:16,0:16:16.09:0,16,277	0/0:9,0:9:18.24:0,18,202	0/0:11,0:11:15.41:0,15,188	0/0:14,0:14:15.12:0,15,195	0/0:21,0:21:7.47:0,7,293	0/0:17,0:17:36.53:0,37,378	0/1:16,0:16:6.32:6,0,168	0/0:7,0:7:9.62:0,10,146
chr10	55713103	.	A	AATG	8721.66	PASS	AB=0.854;AC=26;AF=0.464;AN=56;BaseQRankSum=5.453;DP=481;FS=3.805;HRun=0;HaplotypeScore=127.7624;InbreedingCoeff=-0.4701;MQ=54.53;MQ0=4;MQRankSum=-6.637;QD=23.57;ReadPosRankSum=1.394;VQSLOD=4.5221;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:17,12:28:54.16:1047,54,0	0/1:7,0:7:18.66:133,0,19	0/0:39,0:20:26.74:0,27,442	0/0:21,0:14:7.91:0,8,169	1/1:11,6:17:42.11:785,42,0	0/1:11,0:12:99:140,0,163	0/1:9,1:14:99:374,0,130	0/0:20,0:19:1.88:0,2,388	0/1:9,1:11:88.46:180,0,88	0/1:13,1:20:99:386,0,261	0/1:14,2:18:99:378,0,130	0/1:11,0:11:99:116,0,180	0/0:17,0:17:45.11:0,45,676	0/0:14,0:14:33.55:0,34,499	0/1:15,1:17:99:102,0,137	1/1:4,7:11:24.08:491,24,0	0/1:15,4:20:99:325,0,203	0/1:10,0:9:59.22:129,0,59	0/1:12,1:14:99:312,0,195	0/1:12,5:25:65.71:824,0,66	0/1:15,0:19:99:228,0,167	0/1:9,0:9:99:154,0,105	0/1:11,0:11:99:159,0,140	0/1:14,0:14:99:212,0,118	0/1:15,5:26:99:734,0,115	0/1:13,2:23:99:619,0,153	0/1:15,4:21:59.71:733,0,60	0/1:7,1:8:93.84:160,0,94
chr10	55713127	.	G	GAATGAATA	15181.10	PASS	AB=1.000;AC=30;AF=0.536;AN=56;BaseQRankSum=-0.165;DP=414;FS=29.220;HRun=0;HaplotypeScore=124.6769;InbreedingCoeff=-0.0129;MQ=58.91;MQ0=2;MQRankSum=-7.330;QD=45.32;ReadPosRankSum=0.721;VQSLOD=2.9485;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:24:37.01:37,0,192	1/1:1,9:10:17.93:523,18,0	0/0:19,0:14:18.64:0,19,267	0/0:13,0:11:14.24:0,14,120	0/0:15,0:15:36.90:0,37,225	0/1:11,0:9:47.89:476,0,48	0/1:13,0:13:46.89:621,0,47	1/1:26,0:25:72.02:1326,72,0	0/1:11,0:11:81.91:304,0,82	0/1:11,0:11:36.89:635,0,37	0/1:17,0:17:99:806,0,106	1/1:2,4:7:15.05:637,15,0	0/0:12,0:12:36.08:0,36,745	0/0:10,0:10:30.06:0,30,665	0/1:11,0:11:60.96:403,0,61	0/0:10,0:10:20.15:0,20,110	1/1:19,4:23:47.94:1098,48,0	1/1:6,3:7:12.02:417,12,0	0/1:18,0:18:99:486,0,231	0/1:21,0:21:9.79:1495,0,10	0/1:12,0:12:23.98:395,0,24	1/1:2,5:9:20.99:731,21,0	1/1:2,6:10:15.01:487,15,0	1/1:5,8:14:27.04:801,27,0	0/1:25,0:25:99:1194,0,102	0/1:22,0:22:99:1088,0,147	0/1:22,0:22:99:1010,0,154	0/1:8,0:8:87.90:213,0,88
chr10	55713260	.	G	GAA	4303.14	PASS	AB=0.942;AC=35;AF=0.648;AN=54;BaseQRankSum=-8.067;DP=455;FS=0.562;HRun=12;HaplotypeScore=63.3743;InbreedingCoeff=0.3889;MQ=49.63;MQ0=10;MQRankSum=0.066;QD=12.26;ReadPosRankSum=-3.794;VQSLOD=2.3228;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:19:7.09:0,7,41	0/1:4,0:14:1.23:1,0,45	0/0:8,0:2:1.82:0,2,5	./.	1/1:19,0:19:3:28,3,0	1/1:5,12:19:38.10:479,38,0	1/1:8,6:14:18.05:225,18,0	0/1:4,0:16:30.23:55,0,30	1/1:1,6:7:5.51:51,6,0	1/1:5,19:24:52.90:636,53,0	1/1:4,17:23:41.64:492,42,0	0/1:3,0:10:5.77:6,0,33	0/0:8,0:8:15.87:0,16,153	0/0:12,0:12:26.95:0,27,238	1/1:6,10:19:28.55:307,29,0	1/1:9,0:8:2.92:28,3,0	0/0:4,0:30:14.98:0,15,120	0/1:5,0:13:27.23:27,0,36	1/1:5,6:10:23.87:267,24,0	1/1:5,18:24:41.54:497,42,0	1/1:1,3:3:9.03:126,9,0	0/1:4,0:14:15.08:15,0,32	0/1:5,0:17:3.99:4,0,42	0/0:3,0:5:8.36:0,8,38	0/1:6,11:18:7.21:199,0,7	1/1:12,16:29:48.53:519,49,0	1/1:4,15:20:12.04:166,12,0	1/1:4,12:16:14.54:176,15,0
chr10	55717921	.	A	AGAAG	1320.90	PASS	AB=1.000;AC=26;AF=0.500;AN=52;BaseQRankSum=-3.901;DP=566;FS=2.546;HRun=0;HaplotypeScore=112.9071;InbreedingCoeff=0.2111;MQ=58.82;MQ0=6;MQRankSum=-0.585;QD=3.94;ReadPosRankSum=3.032;VQSLOD=1.9726;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:16,18:36:21.07:484,21,0	1/1:8,0:8:8.32:84,8,0	./.	./.	1/1:5,4:9:3.01:55,3,0	0/1:15,0:15:5.84:44,0,6	0/0:24,0:24:6.01:0,6,56	1/1:33,0:31:2.49:6,2,0	0/1:16,0:16:12.78:13,0,15	0/1:25,0:25:13.90:169,0,14	0/1:14,0:14:15.89:57,0,16	0/0:27,0:27:17.74:0,18,129	0/0:30,0:30:51.16:0,51,751	0/0:22,0:21:33.11:0,33,497	1/1:28,0:28:1.56:136,2,0	0/0:30,0:30:41.26:0,41,573	0/0:21,0:21:6:0,6,69	0/0:19,0:18:1.55:0,2,4	1/1:19,0:19:3.82:40,4,0	1/1:10,0:10:4.68:74,5,0	0/1:26,0:26:34.76:87,0,35	0/0:26,0:26:5.84:0,6,40	0/1:13,0:13:0:0,0,0	1/1:33,0:33:0.47:1,0,0	1/1:12,0:12:7.85:102,8,0	0/1:15,0:14:22.13:92,0,22	0/1:21,0:20:16.99:33,0,17	0/0:8,0:8:9.66:0,10,37
chr10	55717971	.	AAGGGAAGG	A	5798.83	PASS	AB=1.000;AC=25;AF=0.463;AN=54;BaseQRankSum=-1.869;DP=645;FS=41.873;HRun=0;HaplotypeScore=194.0096;InbreedingCoeff=-0.0174;MQ=59.71;MQ0=8;MQRankSum=0.440;QD=14.01;ReadPosRankSum=-3.050;VQSLOD=2.4257;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,105,1326	0/1:8,0:8:99:221,0,138	0/0:10,0:8:24.01:0,24,495	0/0:5,0:4:11.25:0,11,248	0/0:25,0:24:56.86:0,57,522	0/1:24,0:24:99:243,0,310	0/0:24,0:24:5.98:0,6,47	1/1:25,0:24:39.05:842,39,0	0/1:18,0:18:99:162,0,456	0/1:29,0:28:99:216,0,554	0/1:20,0:20:99:158,0,521	1/1:4,29:33:12.03:296,12,0	0/0:33,0:33:96.29:0,96,2938	0/0:23,0:22:66.23:0,66,2077	0/1:25,0:25:99:201,0,528	0/0:28,0:28:81.06:0,81,1855	1/1:19,0:19:45.15:996,45,0	1/1:2,16:18:6.02:137,6,0	0/1:19,0:16:99:141,0,443	0/1:23,0:23:99:304,0,178	0/1:42,0:42:99:438,0,688	1/1:3,22:25:36.04:608,36,0	1/1:0,17:17:8.76:127,9,0	./.	0/1:15,0:15:99:219,0,142	0/1:28,0:27:99:255,0,531	0/1:14,0:13:98.96:99,0,305	0/1:12,0:12:99:136,0,204
chr10	55717972	.	AG	A	2341.14	PASS	AB=0.977;AC=32;AF=0.593;AN=54;BaseQRankSum=8.380;DP=642;FS=19.900;HRun=3;HaplotypeScore=136.0571;InbreedingCoeff=0.4995;MQ=59.90;MQ0=6;MQRankSum=2.360;QD=5.72;ReadPosRankSum=0.115;VQSLOD=-0.5179;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:78.18:0,78,1040	1/1:5,3:8:20.57:172,21,0	0/0:10,0:8:23.99:0,24,302	0/0:5,0:4:12.04:0,12,157	0/0:25,0:24:56.09:0,56,725	1/1:24,0:25:13.82:116,14,0	0/0:26,0:26:0.51:0,1,22	1/1:16,7:22:11.97:264,12,0	0/1:18,0:18:3.02:36,0,3	1/1:28,0:27:45.44:257,45,0	1/1:20,0:20:37.60:171,38,0	0/1:33,0:33:12.73:13,0,25	0/0:33,0:33:96.31:0,96,1345	0/0:22,1:22:66.21:0,66,922	1/1:25,0:25:37.32:244,37,0	0/0:28,0:28:81.24:0,81,1056	0/1:16,3:19:20.45:292,0,20	1/1:17,1:18:5.62:27,6,0	1/1:18,0:16:26.05:103,26,0	1/1:22,1:23:25.21:140,25,0	1/1:40,1:41:52.87:231,53,0	1/1:24,1:25:1.56:96,2,0	0/1:17,0:17:3.06:11,0,3	./.	1/1:15,0:15:33.06:131,33,0	0/1:27,0:27:20.49:126,0,20	0/1:14,0:13:15.86:42,0,16	1/1:12,0:12:20.53:59,21,0
chr10	55717973	.	GGGAA	G	8744.06	PASS	AB=1.000;AC=30;AF=0.556;AN=54;BaseQRankSum=-4.309;DP=644;FS=29.069;HRun=0;HaplotypeScore=144.9669;InbreedingCoeff=0.0486;MQ=60.66;MQ0=6;MQRankSum=-2.612;QD=18.93;ReadPosRankSum=-1.922;VQSLOD=2.7813;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:27.13:0,27,271	0/1:6,0:8:49.17:134,0,49	0/0:10,0:8:23.98:0,24,413	0/0:6,0:5:14.84:0,15,240	0/1:25,0:24:2.01:2,0,37	0/1:25,0:25:15.72:684,0,16	1/1:2,24:26:3.01:57,3,0	1/1:25,0:24:50.97:631,51,0	0/1:18,0:18:75.97:419,0,76	1/1:28,0:27:0.48:684,0,0	0/1:19,0:19:78.88:401,0,79	1/1:33,0:33:12.01:109,12,0	0/0:32,0:32:93.32:0,93,1983	0/0:23,0:22:66.20:0,66,1408	0/1:24,0:24:52.65:624,0,53	0/0:28,0:28:36.68:0,37,737	1/1:18,0:18:34.72:602,35,0	1/1:18,0:18:6.01:65,6,0	0/1:18,0:16:69.26:328,0,69	1/1:23,0:23:17.39:704,17,0	0/1:43,0:43:51.14:1096,0,51	1/1:25,0:25:29.97:340,30,0	1/1:17,0:17:7.48:75,7,0	./.	0/1:15,0:15:15.22:437,0,15	0/1:28,0:28:47.91:701,0,48	0/1:14,0:14:54.48:334,0,54	0/1:12,0:12:15.51:318,0,16
chr10	55717977	.	A	AG	3047.89	PASS	AB=1.000;AC=35;AF=0.648;AN=54;BaseQRankSum=8.452;DP=635;FS=13.010;HRun=2;HaplotypeScore=140.6746;InbreedingCoeff=0.7873;MQ=63.59;MQ0=5;MQRankSum=-0.855;QD=8.22;ReadPosRankSum=-0.880;VQSLOD=-0.2159;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:77.16:0,77,438	0/1:8,0:8:4.55:22,0,5	0/0:13,0:11:30.09:0,30,358	0/0:7,0:6:15.03:0,15,174	0/0:26,0:25:32.76:0,33,236	1/1:24,0:25:45.76:236,46,0	0/0:26,0:26:1.25:0,1,3	1/1:21,0:20:23.89:177,24,0	1/1:18,2:20:31.86:187,32,0	1/1:27,0:27:66.88:366,67,0	1/1:18,0:18:43.70:222,44,0	0/0:33,0:33:7.55:0,8,22	0/0:32,0:32:93.26:0,93,1120	0/0:23,0:22:63.20:0,63,780	1/1:23,1:24:46.13:257,46,0	0/0:27,0:27:74.08:0,74,398	1/1:18,0:18:3.37:141,3,0	1/1:17,0:17:0.62:2,1,0	1/1:18,1:17:40.50:224,40,0	1/1:21,0:21:36.46:174,36,0	1/1:44,2:46:98.03:475,98,0	1/1:23,0:23:5.36:46,5,0	1/1:17,0:17:0.28:15,0,0	./.	1/1:13,0:13:30.84:151,31,0	1/1:28,0:28:37.22:262,37,0	1/1:13,2:15:13.47:167,13,0	1/1:11,0:11:29.21:119,29,0
chr10	55717979	.	G	GA	1496.98	PASS	AB=1.000;AC=13;AF=0.241;AN=54;BaseQRankSum=-4.686;DP=644;FS=5.306;HRun=1;HaplotypeScore=147.6767;InbreedingCoeff=0.8658;MQ=66.54;MQ0=5;MQRankSum=-0.357;QD=10.69;ReadPosRankSum=-3.993;VQSLOD=0.2298;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,117,1202	1/1:4,4:8:20.28:162,20,0	0/0:17,0:15:42.08:0,42,470	0/0:7,0:6:18.03:0,18,207	0/0:27,0:26:26.44:0,26,660	0/0:24,0:24:42.39:0,42,236	0/0:27,0:27:11.56:0,12,80	1/1:11,11:21:57.06:644,57,0	0/0:22,0:22:30.60:0,31,225	0/0:26,0:26:52.35:0,52,244	0/0:19,0:19:38.68:0,39,170	0/1:34,0:34:2.89:8,0,3	0/0:33,0:33:90.25:0,90,1121	0/0:22,0:21:63.17:0,63,776	0/0:23,0:23:39.05:0,39,213	0/0:27,0:27:75.22:0,75,894	1/1:15,4:19:29.06:493,29,0	1/1:16,1:17:5.94:41,6,0	0/0:20,0:18:26.77:0,27,155	0/0:19,0:19:47.65:0,48,211	0/0:44,0:44:83.45:0,83,433	1/1:23,0:23:35.06:273,35,0	1/1:17,0:17:5.76:52,6,0	./.	0/0:13,0:13:26.51:0,27,101	0/0:30,0:30:57.38:0,57,354	0/0:16,0:16:5.49:0,5,153	0/0:11,0:11:29.66:0,30,131
chr10	55718123	.	G	GCACA	2461.33	PASS	AB=1.000;AC=31;AF=0.596;AN=52;BaseQRankSum=3.540;DP=678;FS=6.097;HRun=0;HaplotypeScore=187.4966;InbreedingCoeff=0.6794;MQ=60.32;MQ0=9;MQRankSum=-3.308;QD=5.74;ReadPosRankSum=-3.100;VQSLOD=1.4970;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:22,13:37:3.89:28,4,0	0/0:12,0:12:15.01:0,15,135	./.	0/0:39,0:25:2.92:0,3,47	1/1:19,5:26:6.02:142,6,0	1/1:23,0:23:9.03:147,9,0	1/1:37,0:35:9.03:130,9,0	0/1:28,0:25:5.75:13,0,6	1/1:22,0:27:11.94:218,12,0	1/1:19,0:22:20.60:238,21,0	1/1:20,0:19:3.01:48,3,0	0/0:29,0:29:40.70:0,41,368	0/0:17,0:24:35.65:0,36,648	0/0:21,0:22:23.56:0,24,441	1/1:23,0:23:12:161,12,0	1/1:15,5:27:27.05:442,27,0	0/0:27,0:27:39.06:0,39,375	0/0:22,0:22:39.08:0,39,390	1/1:8,0:8:3.01:58,3,0	0/1:16,0:16:0:0,0,0	1/1:31,0:31:15:172,15,0	0/0:19,0:19:18.03:0,18,173	0/0:13,0:13:24.05:0,24,241	0/1:30,0:29:4.14:4,0,179	1/1:25,0:24:2.80:13,3,0	1/1:28,0:27:33.15:516,33,0	1/1:17,0:19:17.95:316,18,0	./.
chr10	55718154	.	CACACAG	C	2283.31	PASS	AB=1.000;AC=24;AF=0.429;AN=56;BaseQRankSum=-5.902;DP=674;FS=6.358;HRun=0;HaplotypeScore=175.4280;InbreedingCoeff=-0.3395;MQ=58.49;MQ0=15;MQRankSum=1.675;QD=4.39;ReadPosRankSum=-4.542;VQSLOD=0.6388;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:32:99:113,0,102	1/1:11,1:12:20.33:170,20,0	0/0:33,0:15:39.71:0,40,444	0/0:32,0:18:47.66:0,48,656	0/1:21,0:21:25.78:26,0,211	0/1:27,0:26:99:116,0,156	0/1:35,0:33:99:130,0,139	1/1:3,23:23:41.31:657,41,0	0/1:26,0:26:74.90:75,0,164	0/1:19,0:19:99:144,0,377	0/1:21,0:20:95.68:96,0,180	0/1:31,0:31:99:112,0,468	0/0:28,0:28:75.16:0,75,1884	0/0:19,0:19:50.94:0,51,1329	0/1:24,0:24:76.64:77,0,425	0/1:25,0:25:32.78:33,0,522	0/1:32,0:32:52.92:53,0,247	0/0:22,0:22:27.10:0,27,433	0/1:19,0:17:99:112,0,189	1/1:14,0:14:5.75:44,6,0	0/1:41,0:40:99:235,0,337	0/1:19,0:19:6.06:6,0,133	0/0:17,0:17:29.61:0,30,356	0/1:22,0:21:30.61:31,0,269	0/1:24,0:23:56.06:56,0,143	0/1:31,0:30:99:119,0,935	0/1:18,0:17:50.73:51,0,454	0/0:3,0:3:3.01:0,3,45
chr10	55718156	.	CACAG	C	3421.14	PASS	AB=0.993;AC=28;AF=0.500;AN=56;BaseQRankSum=-7.835;DP=674;FS=1.349;HRun=0;HaplotypeScore=157.7818;InbreedingCoeff=-0.3206;MQ=61.74;MQ0=15;MQRankSum=1.499;QD=6.30;ReadPosRankSum=-4.741;VQSLOD=1.2246;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:32:28.18:138,0,28	1/1:1,11:12:20.90:310,21,0	0/0:35,0:17:50.74:0,51,487	0/0:30,0:19:47.66:0,48,562	0/1:21,0:21:46.97:47,0,105	0/1:26,0:25:61.17:119,0,61	0/1:35,0:33:40.89:134,0,41	1/1:25,1:23:62.42:573,62,0	0/1:25,0:25:75.42:75,0,86	0/1:19,0:19:99:224,0,193	0/1:20,0:19:82.29:99,0,82	0/1:30,3:33:83.83:348,0,84	0/0:28,0:28:72.10:0,72,1395	0/0:20,0:20:54.09:0,54,1051	0/1:24,0:24:99:109,0,148	0/1:26,0:26:78.82:79,0,241	1/1:29,3:32:5.47:209,5,0	0/1:22,0:22:5.38:5,0,13	0/1:17,0:15:85.07:144,0,85	1/1:15,0:15:8.86:68,9,0	0/1:40,0:39:99:242,0,145	1/1:17,3:20:2.52:112,3,0	0/0:18,0:18:11.19:0,11,82	0/1:20,1:20:99:102,0,114	0/1:24,0:23:50.61:80,0,51	0/1:31,0:30:99:135,0,542	0/1:18,0:17:53.32:53,0,248	0/1:3,0:3:15.98:16,0,17
chr10	55718158	.	CAG	C	5877.03	PASS	AB=1.000;AC=42;AF=0.750;AN=56;BaseQRankSum=-4.444;DP=668;FS=9.901;HRun=0;HaplotypeScore=134.7086;InbreedingCoeff=0.3556;MQ=62.87;MQ0=13;MQRankSum=-0.190;QD=10.53;ReadPosRankSum=-0.501;VQSLOD=4.1060;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:32,0:32:18.04:205,18,0	1/1:12,0:12:20.85:162,21,0	0/0:32,0:17:50.76:0,51,454	0/0:29,0:19:47.84:0,48,457	1/1:22,0:22:2.46:81,2,0	1/1:25,0:24:4.39:125,4,0	1/1:35,0:33:13.83:210,14,0	1/1:26,0:23:60.61:474,61,0	1/1:27,0:27:4.96:107,5,0	0/1:19,0:19:0.70:289,0,1	1/1:19,0:18:2.56:129,3,0	1/1:22,13:35:60.61:875,61,0	0/0:28,0:28:56.88:0,57,930	0/0:20,0:20:42.98:0,43,652	1/1:26,0:26:1.38:248,1,0	0/1:25,0:25:22.09:95,0,22	1/1:8,26:34:38.92:496,39,0	1/1:2,18:20:42.11:584,42,0	1/1:17,0:15:9.39:184,9,0	1/1:15,0:15:8.77:68,9,0	0/1:38,0:37:0.82:254,0,1	1/1:3,16:19:17.92:227,18,0	1/1:3,14:17:3.74:287,4,0	1/1:6,14:19:20.07:309,20,0	0/1:24,0:23:0.55:104,0,1	0/1:32,0:31:88.05:234,0,88	0/1:17,0:16:10.07:107,0,10	1/1:2,0:2:2.98:22,3,0
chr10	55718848	.	TTCTTCCAC	T	17902.29	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=17.393;DP=593;FS=0.000;HRun=0;HaplotypeScore=165.4884;InbreedingCoeff=0.9879;MQ=83.41;MQ0=0;MQRankSum=-17.880;QD=72.77;ReadPosRankSum=3.993;VQSLOD=4.8774;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:99:0,99,3567	0/0:7,0:7:21.07:0,21,885	0/0:22,0:22:63.14:0,63,2325	0/0:21,0:21:63.22:0,63,2647	0/0:35,0:35:99:0,99,3234	1/1:0,22:22:54.14:1457,54,0	1/1:0,17:17:36.12:1023,36,0	0/0:42,0:42:99:0,123,5581	1/1:0,22:22:60.21:1744,60,0	1/1:0,20:20:60.21:1720,60,0	1/1:0,16:16:32.87:884,33,0	0/0:15,0:15:45.15:0,45,2059	0/0:28,0:28:84.29:0,84,3635	0/0:14,0:14:39.13:0,39,1666	1/1:0,27:27:75.26:2210,75,0	0/0:18,0:18:54.19:0,54,1932	0/0:24,0:24:72.25:0,72,3307	0/0:23,0:23:69.24:0,69,3196	1/1:0,12:12:36.08:955,36,0	1/1:0,16:16:42.14:1025,42,0	1/1:0,10:10:9.50:255,10,0	0/0:24,0:24:72.25:0,72,3171	0/0:14,0:14:39.13:0,39,1757	0/0:27,0:27:81.28:0,81,3724	1/1:0,23:23:60.21:1713,60,0	1/1:0,23:23:66.23:1957,66,0	1/1:0,32:32:87.30:2597,87,0	1/1:0,6:6:12.04:363,12,0
chr10	55719178	.	T	TG	7646.11	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-15.586;DP=733;FS=0.312;HRun=0;HaplotypeScore=70.9750;InbreedingCoeff=0.9946;MQ=71.86;MQ0=0;MQRankSum=1.645;QD=36.24;ReadPosRankSum=2.333;VQSLOD=4.7674;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,117,1571	1/1:1,7:8:21.06:300,21,0	0/0:31,0:20:12.58:0,13,452	0/0:38,0:26:36.37:0,36,602	0/0:22,0:22:66.12:0,66,867	0/0:17,0:17:51.16:0,51,696	0/0:28,0:27:84.23:0,84,1134	1/1:1,31:32:87.11:1117,87,0	0/0:29,0:29:84.25:0,84,1118	0/0:13,0:13:39.13:0,39,545	0/0:24,0:24:69.13:0,69,899	1/1:0,26:26:66.22:943,66,0	0/0:29,0:29:87.22:0,87,1110	0/0:36,0:36:99:0,105,1356	0/0:32,0:32:93.17:0,93,1221	0/0:30,0:30:87.19:0,87,1102	1/1:0,43:43:99:1584,111,0	1/1:1,22:23:63.21:898,63,0	0/0:25,0:25:75.16:0,75,934	0/0:18,0:18:54.12:0,54,701	0/0:18,0:18:51.15:0,51,681	1/1:0,21:21:51.08:702,51,0	1/1:1,21:22:59.01:819,59,0	1/1:0,36:36:90.30:1284,90,0	0/0:20,0:20:60.17:0,60,788	0/0:31,0:31:90.28:0,90,1214	0/0:29,0:29:87.25:0,87,1164	0/0:9,0:9:27.09:0,27,377
chr10	55719335	.	AT	A	2679.67	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=7.322;DP=531;FS=4.223;HRun=11;HaplotypeScore=61.0380;InbreedingCoeff=0.9354;MQ=65.69;MQ0=2;MQRankSum=-2.403;QD=16.75;ReadPosRankSum=-0.126;VQSLOD=4.4467;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:26:42.75:0,43,215	1/1:0,5:6:17.02:129,17,0	0/0:10,0:9:12:0,12,111	0/0:10,0:6:5.14:0,5,71	0/0:5,0:20:46.07:0,46,272	0/0:20,0:21:47.25:0,47,521	0/0:18,0:18:39.07:0,39,401	1/1:7,34:43:96.88:761,97,0	0/0:19,0:19:48.12:0,48,512	0/0:12,0:12:33.08:0,33,347	0/0:16,0:16:39.08:0,39,408	1/1:1,15:17:40.99:326,41,0	0/0:14,1:15:14.44:0,14,352	0/0:20,1:21:26.48:0,26,481	0/0:24,2:26:7.85:0,8,488	0/0:7,0:22:46:0,46,255	1/1:3,20:23:50.93:419,51,0	1/1:2,25:27:62.68:505,63,0	0/0:16,0:15:39.08:0,39,403	0/0:16,0:16:36.08:0,36,375	0/0:11,2:13:5.38:0,5,243	1/1:1,11:13:26:203,26,0	1/1:2,14:16:29.71:246,30,0	1/1:2,13:15:35.94:296,36,0	0/0:23,0:23:54.14:0,54,576	0/0:33,1:34:64.49:0,64,826	0/0:16,0:16:42.09:0,42,440	0/0:15,1:15:14.29:0,14,285
chr10	55720374	.	TG	T	1837.49	PASS	AC=48;AF=0.960;AN=50;BaseQRankSum=-0.800;DP=238;FS=0.000;HRun=1;HaplotypeScore=28.8899;InbreedingCoeff=0.0942;MQ=18.54;MQ0=139;MQRankSum=0.585;QD=9.99;ReadPosRankSum=0.893;VQSLOD=1.2099;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,5:6:11.99:122,12,0	1/1:5,5:6:2.57:132,3,0	./.	./.	1/1:6,4:3:3.01:36,3,0	1/1:3,2:1:3.01:36,3,0	1/1:4,4:4:12.04:144,12,0	1/1:17,3:2:5.99:58,6,0	1/1:3,1:2:5.69:45,6,0	1/1:5,2:4:5.17:72,5,0	1/1:2,6:6:3.01:36,3,0	1/1:6,2:3:8.95:82,9,0	1/1:1,3:2:3.01:36,3,0	1/1:3,3:4:11.40:116,11,0	1/1:2,2:3:8.99:92,9,0	1/1:3,1:3:8.57:66,9,0	1/1:3,3:4:11.77:104,12,0	1/1:4,2:2:6.02:74,6,0	1/1:8,2:2:6.02:75,6,0	1/1:4,4:4:12.04:144,12,0	1/1:4,1:2:3.48:37,3,0	1/1:3,4:5:12.03:134,12,0	1/1:2,4:3:5.99:58,6,0	./.	1/1:3,4:4:3.01:36,3,0	1/1:8,2:3:8.51:80,9,0	1/1:6,7:7:9.18:110,9,0	0/0:8,0:1:2.74:0,3,12
chr10	55720468	.	ACC	A	1477.07	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=0.596;DP=282;FS=8.384;HRun=10;HaplotypeScore=34.5965;InbreedingCoeff=0.7959;MQ=55.03;MQ0=37;MQRankSum=-3.185;QD=20.51;ReadPosRankSum=3.492;VQSLOD=1.1680;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:7:15.05:0,15,236	1/1:2,4:6:12.03:134,12,0	0/0:36,0:12:28.31:0,28,327	0/0:27,0:2:3.01:0,3,36	0/0:10,0:10:11.35:0,11,182	0/0:5,0:5:12.01:0,12,164	0/0:9,0:10:26.05:0,26,326	1/1:9,4:6:12.03:134,12,0	0/0:7,0:6:12.04:0,12,168	0/0:7,0:7:9.03:0,9,138	0/0:6,0:6:6.02:0,6,86	1/1:2,9:9:21.06:234,21,0	0/0:9,0:9:18.06:0,18,261	0/0:6,0:6:9.03:0,9,125	0/0:7,0:7:15.05:0,15,221	0/0:10,0:9:12.04:0,12,188	1/1:2,12:12:33.09:368,33,0	1/1:0,9:9:27.07:301,27,0	0/0:7,0:6:6.02:0,6,83	0/0:8,0:8:2.85:0,3,47	0/0:14,0:12:20.37:0,20,281	1/1:1,6:6:18.05:199,18,0	1/1:2,6:8:18.05:201,18,0	1/1:1,3:4:9.02:100,9,0	0/0:8,0:8:3.01:0,3,36	0/0:9,0:7:15.05:0,15,226	0/0:9,0:6:9:0,9,105	0/0:3,0:3:9.03:0,9,143
chr10	55721372	.	AT	A	5084.66	PASS	AB=0.665;AC=39;AF=0.696;AN=56;BaseQRankSum=5.085;DP=532;FS=2.029;HRun=13;HaplotypeScore=63.8591;InbreedingCoeff=0.4790;MQ=64.12;MQ0=7;MQRankSum=-0.807;QD=12.40;ReadPosRankSum=0.369;VQSLOD=4.9378;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,3:37:3.41:0,3,518	1/1:2,7:9:17.89:131,18,0	0/0:5,0:6:3.22:0,3,13	0/0:18,0:13:5.05:0,5,68	0/0:17,1:17:5.21:0,5,314	1/1:5,10:16:25.87:181,26,0	1/1:10,13:23:6.56:212,7,0	1/1:6,12:21:36.50:250,36,0	1/1:4,11:16:30.65:208,31,0	1/1:3,12:15:9.60:233,10,0	1/1:3,15:18:32.75:241,33,0	1/1:1,17:18:38.78:285,39,0	0/0:17,1:18:9.57:0,10,263	0/1:19,3:21:1.79:2,0,298	1/1:1,13:14:32.81:241,33,0	0/0:19,5:24:10.15:0,10,408	1/1:8,20:27:60.86:441,61,0	1/1:3,14:18:33.88:231,34,0	0/1:14,18:31:17.20:335,0,17	0/1:5,10:15:40.75:180,0,41	1/1:2,12:13:26.85:197,27,0	1/1:6,14:19:38.67:279,39,0	0/1:5,18:25:4.66:281,0,5	1/1:1,20:22:32.53:393,33,0	1/1:5,7:12:20.87:153,21,0	1/1:2,16:17:15.53:275,16,0	1/1:2,15:19:13.65:245,14,0	0/1:6,6:11:25.76:92,0,26
chr10	55721785	.	ATAC	A	1730.53	PASS	AB=1.000;AC=27;AF=0.482;AN=56;BaseQRankSum=8.033;DP=509;FS=4.432;HRun=0;HaplotypeScore=134.4903;InbreedingCoeff=0.5921;MQ=78.38;MQ0=0;MQRankSum=-6.420;QD=6.71;ReadPosRankSum=4.893;VQSLOD=2.7031;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:28,1:29:24.32:194,24,0	0/0:14,0:14:36.08:0,36,755	0/0:26,0:21:55.77:0,56,791	0/0:21,0:17:32.04:0,32,486	0/1:23,0:22:31.09:66,0,31	1/1:21,0:20:32.62:148,33,0	0/1:18,0:18:30.66:121,0,31	0/0:25,0:25:69.19:0,69,1485	1/1:13,0:13:29.20:140,29,0	0/1:19,0:19:75.86:82,0,76	1/1:11,2:13:28.77:179,29,0	0/0:18,0:18:51.16:0,51,1068	0/0:9,0:9:27.09:0,27,510	0/0:18,0:18:51.16:0,51,1019	1/1:12,0:12:1.39:107,1,0	1/1:15,1:15:4.48:138,4,0	0/0:28,0:28:81.19:0,81,1642	0/0:28,0:28:84.27:0,84,1776	0/1:11,0:10:25.55:26,0,39	1/1:18,0:18:12.11:135,12,0	1/1:5,0:5:7.42:28,7,0	0/0:24,0:24:66.21:0,66,1453	0/0:20,0:20:60.19:0,60,1261	0/0:20,0:20:60.19:0,60,1309	0/1:10,0:10:3.95:75,0,4	1/1:14,0:13:29.52:148,30,0	1/1:23,0:23:10.86:140,11,0	1/1:12,1:13:35.21:212,35,0
chr10	55721788	.	CTTCT	C	9519.68	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=-10.808;DP=512;FS=2.090;HRun=0;HaplotypeScore=119.9378;InbreedingCoeff=0.9904;MQ=77.75;MQ0=2;MQRankSum=-4.152;QD=37.48;ReadPosRankSum=2.765;VQSLOD=5.2718;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,27:29:51.17:952,51,0	0/0:13,0:13:39.11:0,39,783	0/0:31,0:21:50.71:0,51,709	0/0:25,0:18:31.73:0,32,420	1/1:1,20:20:44.81:564,45,0	1/1:0,22:21:42.06:733,42,0	1/1:0,15:15:36.12:691,36,0	0/0:29,0:29:78.23:0,78,1566	1/1:0,14:14:33.11:634,33,0	1/1:4,15:19:38.01:600,38,0	1/1:2,11:13:35.97:577,36,0	0/0:16,0:16:48.13:0,48,1004	0/0:9,0:9:27.01:0,27,474	0/0:17,0:17:51.10:0,51,995	1/1:1,11:12:24.08:461,24,0	1/1:2,13:14:29.73:550,30,0	0/0:25,0:25:72.21:0,72,1568	0/0:29,0:29:84.15:0,84,1696	1/1:1,9:9:24.01:321,24,0	1/1:0,18:18:45.04:744,45,0	1/1:0,5:5:9.03:174,9,0	0/0:23,0:23:66.20:0,66,1425	0/0:20,0:20:60.17:0,60,1247	0/0:21,0:21:60.17:0,60,1290	1/1:0,9:9:20.94:403,21,0	1/1:0,15:15:42.05:694,42,0	1/1:1,21:23:39.13:711,39,0	1/1:2,10:13:39.13:711,39,0
chr10	55721791	.	CT	C	1119.49	PASS	AB=0.969;AC=33;AF=0.589;AN=56;BaseQRankSum=6.532;DP=507;FS=1.284;HRun=11;HaplotypeScore=124.7554;InbreedingCoeff=0.8859;MQ=76.91;MQ0=2;MQRankSum=-6.802;QD=4.04;ReadPosRankSum=1.875;VQSLOD=1.3880;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:27,1:28:37.73:128,38,0	0/0:13,0:13:32.32:0,32,209	0/1:30,1:19:42.45:42,0,94	0/0:29,0:20:8.91:0,9,83	1/1:21,0:20:16.28:55,16,0	1/1:22,0:21:28.46:96,28,0	1/1:15,0:15:28.46:95,28,0	0/0:30,0:30:60.05:0,60,307	1/1:14,0:14:26.09:88,26,0	1/1:15,0:15:23.30:91,23,0	1/1:11,2:13:21.99:79,22,0	0/0:16,0:16:37.83:0,38,227	0/0:8,0:9:11.18:0,11,154	0/0:18,0:18:16.63:0,17,344	1/1:11,0:11:18.97:64,19,0	1/1:14,1:14:22.96:80,23,0	0/0:24,0:24:61.43:0,61,361	0/0:28,0:28:64.65:0,65,364	1/1:9,0:8:9.71:33,10,0	1/1:18,0:18:27.90:93,28,0	1/1:5,0:5:7.11:24,7,0	0/0:22,0:22:58.30:0,58,339	0/0:20,0:20:46.27:0,46,260	0/0:21,0:21:54.90:0,55,306	1/1:9,0:9:16.60:56,17,0	1/1:16,0:15:28.03:102,28,0	1/1:22,0:22:31.18:110,31,0	1/1:12,1:13:30.46:105,30,0
chr10	55722217	.	CT	C	1079.97	PASS	AB=0.857;AC=21;AF=0.375;AN=56;BaseQRankSum=0.042;DP=543;FS=2.189;HRun=15;HaplotypeScore=68.9713;InbreedingCoeff=0.4646;MQ=69.33;MQ0=0;MQRankSum=0.555;QD=4.12;ReadPosRankSum=5.072;VQSLOD=0.9014;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:50:50.43:0,50,298	1/1:6,11:17:25.83:172,26,0	0/1:16,0:11:4.33:4,0,75	0/0:10,0:9:6.21:0,6,50	0/0:5,0:12:23.52:0,24,151	0/0:19,2:25:4.57:0,5,151	0/1:22,4:28:22.24:22,0,284	0/1:15,19:35:1.59:217,0,2	0/1:12,4:16:24.37:24,0,168	0/0:19,0:20:13.13:0,13,209	0/0:14,1:16:16.08:0,16,209	1/1:8,16:26:24.50:146,24,0	0/0:15,1:16:4.58:0,5,153	0/0:19,1:20:3.35:0,3,124	0/0:12,0:15:35.50:0,35,274	0/0:7,0:24:22.88:0,23,123	1/1:8,15:23:29.47:192,29,0	1/1:4,11:15:23.48:154,23,0	0/0:18,0:21:26.59:0,27,198	0/0:17,0:18:29.28:0,29,225	0/0:14,1:15:3.08:0,3,139	1/1:6,6:12:8.69:57,9,0	1/1:4,6:10:11.37:76,11,0	1/1:3,17:20:12.37:189,12,0	0/1:7,1:8:3.03:3,0,90	0/1:18,2:20:2.14:2,0,211	0/1:14,2:16:5.60:6,0,187	0/0:19,0:19:35.97:0,36,310
chr10	55722853	.	G	GA	1885.56	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-5.875;DP=607;FS=9.479;HRun=9;HaplotypeScore=67.5879;InbreedingCoeff=0.8784;MQ=62.33;MQ0=6;MQRankSum=2.364;QD=19.64;ReadPosRankSum=1.596;VQSLOD=3.8208;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,26:32:52.15:794,52,0	0/0:5,0:5:15:0,15,130	0/0:10,0:8:8.89:0,9,125	0/0:7,0:3:5.51:0,6,39	1/1:4,22:27:42.92:670,43,0	0/0:15,0:14:41.99:0,42,364	0/0:29,0:29:74.98:0,75,650	0/0:20,0:20:47.97:0,48,415	0/0:10,0:10:23.99:0,24,208	0/0:23,0:23:62.36:0,62,528	0/0:25,0:25:65.97:0,66,571	0/0:23,0:22:62.95:0,63,539	0/0:18,0:18:22.39:0,22,381	0/0:20,0:20:56.98:0,57,494	0/0:26,0:26:65.97:0,66,571	1/1:7,30:37:31.11:564,31,0	0/0:26,0:26:68.40:0,68,598	0/0:23,0:23:53.64:0,54,453	0/0:16,0:15:44.99:0,45,390	0/0:18,0:17:47.99:0,48,417	0/0:24,0:25:62.01:0,62,527	0/0:19,0:19:56.97:0,57,489	0/0:17,0:16:41.99:0,42,363	0/0:37,0:37:93.44:0,93,807	0/0:30,0:30:82.80:0,83,708	0/0:23,0:23:62.02:0,62,514	0/0:32,0:32:76.99:0,77,655	0/0:12,1:13:2.82:0,3,252
chr10	55722963	.	T	TACACACAC	2655.79	PASS	AB=1.000;AC=21;AF=0.404;AN=52;BaseQRankSum=2.908;DP=530;FS=0.607;HRun=0;HaplotypeScore=177.1809;InbreedingCoeff=-0.0991;MQ=65.28;MQ0=7;MQRankSum=-6.888;QD=9.35;ReadPosRankSum=-4.707;VQSLOD=1.3361;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,99,2470	0/1:4,0:4:18.81:19,0,74	0/0:28,0:18:26.78:0,27,413	0/0:27,0:15:6.43:0,6,494	0/0:31,0:31:72.20:0,72,1716	0/1:15,0:16:81.76:82,0,266	0/1:20,0:21:77.46:77,0,417	0/1:32,0:31:28.62:1171,0,29	0/1:15,0:16:26.93:27,0,375	0/1:14,0:18:2.71:3,0,574	0/1:15,0:16:89.99:90,0,273	./.	0/0:19,0:19:51.15:0,51,1149	0/0:23,0:23:54.17:0,54,1350	0/1:18,0:20:99:182,0,305	0/0:29,0:29:21.32:0,21,1644	1/1:1,7:8:3.01:68,3,0	1/1:6,0:6:3.01:64,3,0	0/0:8,0:12:27.09:0,27,626	0/0:14,0:15:18.06:0,18,430	0/1:20,0:22:29.80:30,0,391	1/1:14,3:16:12.04:381,12,0	1/1:13,6:18:15.05:360,15,0	./.	0/1:10,0:12:39.92:40,0,168	0/1:13,0:18:11.38:11,0,938	0/1:24,0:28:99:176,0,257	0/1:10,0:10:39.25:39,0,134
chr10	55722967	.	C	CAGAGAGAG	3986.54	PASS	AB=0.923;AC=28;AF=0.538;AN=52;BaseQRankSum=5.116;DP=521;FS=0.000;HRun=0;HaplotypeScore=171.4928;InbreedingCoeff=0.4672;MQ=65.38;MQ0=8;MQRankSum=-6.079;QD=13.79;ReadPosRankSum=-3.331;VQSLOD=2.1961;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,105,2941	0/1:4,0:4:51.71:52,0,136	0/0:30,0:19:51.92:0,52,874	0/0:27,0:15:33.52:0,34,664	0/0:32,0:32:81.26:0,81,2174	1/1:14,2:16:9.92:358,10,0	1/1:20,1:21:11.01:304,11,0	0/1:28,0:27:30.10:30,0,307	1/1:15,1:16:16.76:353,17,0	1/1:13,1:16:18.20:483,18,0	0/1:4,10:16:1.37:226,0,1	./.	0/0:19,0:19:57.20:0,57,1561	0/0:23,0:23:63.22:0,63,1751	1/1:15,4:20:28.32:713,28,0	0/1:27,1:28:42.40:42,0,2019	./.	0/0:6,0:6:12.03:0,12,163	0/1:12,0:11:7.20:40,0,7	1/1:13,0:13:1.50:47,1,0	1/1:19,2:21:8.02:216,8,0	0/1:17,0:16:1.82:2,0,44	0/0:18,0:17:12:0,12,144	0/0:12,0:12:6.01:0,6,93	1/1:9,1:10:2:184,2,0	1/1:16,1:17:3.12:136,3,0	1/1:10,15:27:17.54:641,18,0	1/1:5,1:6:9.92:160,10,0
chr10	55723021	.	CTTCTT	C	3948.99	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=9.216;DP=562;FS=1.614;HRun=0;HaplotypeScore=139.3826;InbreedingCoeff=0.9630;MQ=67.51;MQ0=3;MQRankSum=-9.691;QD=50.63;ReadPosRankSum=-1.041;VQSLOD=3.9356;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,126,3828	1/1:0,5:5:15.05:341,15,0	0/0:16,0:12:8.31:0,8,715	0/0:24,0:17:10.65:0,11,338	0/0:22,0:22:63.22:0,63,1988	0/0:19,0:19:57.15:0,57,1725	0/0:35,0:35:99:0,102,3135	1/1:0,17:17:48.02:869,48,0	0/0:25,0:25:75.26:0,75,2316	0/0:23,0:23:66.23:0,66,2094	0/0:13,0:13:36.96:0,37,897	1/1:0,14:14:36.12:801,36,0	0/0:27,0:27:81.28:0,81,2523	0/0:22,0:22:66.23:0,66,2047	0/0:34,0:34:99:0,99,3054	0/0:39,0:39:99:0,114,3668	1/1:0,8:8:21.07:469,21,0	1/1:0,4:4:12.04:279,12,0	0/0:24,0:24:72.25:0,72,2320	0/0:17,0:17:48.16:0,48,1501	0/0:32,0:32:84.15:0,84,2555	1/1:0,10:10:24.08:527,24,0	1/1:0,9:9:21.07:455,21,0	1/1:0,11:11:9.35:209,9,0	0/0:9,0:9:27.09:0,27,878	0/0:19,0:19:57.20:0,57,1717	0/0:20,0:20:51.18:0,51,1569	0/0:16,0:16:48.13:0,48,1216
chr10	55723484	.	C	CA	2643.60	PASS	AB=0.933;AC=51;AF=0.911;AN=56;BaseQRankSum=1.839;DP=648;FS=3.778;HRun=18;HaplotypeScore=173.4086;InbreedingCoeff=0.4648;MQ=63.02;MQ0=2;MQRankSum=-2.693;QD=4.60;ReadPosRankSum=-0.648;VQSLOD=0.6506;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:12:11.47:59,11,0	0/1:13,1:14:4.87:22,0,5	0/0:45,0:24:3.95:0,4,16	0/0:28,0:17:4.14:0,4,18	1/1:23,0:23:27.50:125,28,0	1/1:21,0:20:37.49:202,37,0	1/1:13,0:13:12.71:62,13,0	1/1:23,11:36:35.93:223,36,0	1/1:22,0:21:14.34:75,14,0	1/1:33,0:30:28.69:152,29,0	1/1:24,0:21:31.33:162,31,0	1/1:17,0:17:22.77:123,23,0	1/1:30,0:30:5.19:29,5,0	1/1:19,1:20:5.93:42,6,0	1/1:27,0:25:17.25:91,17,0	1/1:27,0:26:28.53:151,29,0	1/1:21,1:23:27.25:160,27,0	1/1:16,1:17:7.49:45,7,0	1/1:24,0:22:17.25:93,17,0	1/1:25,0:24:20.06:103,20,0	1/1:13,0:12:8.15:38,8,0	1/1:12,8:20:6.29:95,6,0	1/1:20,0:20:12.01:70,12,0	1/1:20,1:21:23.37:151,23,0	1/1:14,0:14:10.18:48,10,0	1/1:32,0:32:53.89:276,54,0	1/1:27,0:26:20.22:100,20,0	1/1:19,0:17:12:55,12,0
chr10	55724059	.	TAAGAGCACCCGACTAAAAAAAAAAAAAA	T	3107.90	PASS	AB=0.800;AC=15;AF=0.268;AN=56;BaseQRankSum=6.034;DP=364;FS=8.415;HRun=0;HaplotypeScore=205.6233;InbreedingCoeff=0.7544;MQ=64.36;MQ0=15;MQRankSum=-5.294;QD=37.44;ReadPosRankSum=3.806;VQSLOD=1.4141;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:27.06:0,27,1155	1/1:5,5:10:9.03:642,9,0	0/0:25,0:17:10.27:0,10,806	0/0:15,0:14:17.48:0,17,516	0/0:13,0:13:18.95:0,19,823	0/0:16,0:16:6.02:0,6,329	0/0:6,0:6:9.03:0,9,317	1/1:9,0:8:2.99:48,3,0	0/0:7,0:7:6.02:0,6,238	0/0:13,0:12:27.08:0,27,1141	0/0:12,0:12:21.07:0,21,1404	1/1:5,6:11:12.04:856,12,0	0/0:1,0:1:3.01:0,3,217	0/0:13,0:13:27.09:0,27,1521	0/0:14,0:14:15.05:0,15,652	0/0:17,0:17:24.07:0,24,865	1/1:8,3:11:3:214,3,0	1/1:3,1:4:6:237,6,0	0/0:22,0:11:21.07:0,21,1393	0/0:15,0:15:33.10:0,33,1868	0/0:17,0:17:21.07:0,21,1387	1/1:5,4:9:9.03:598,9,0	1/1:13,8:20:14.97:682,15,0	0/1:6,2:8:0:0,0,0	0/0:8,0:8:9.01:0,9,160	0/0:19,0:19:42.12:0,42,1772	0/0:22,0:21:15.05:0,15,701	0/0:10,0:10:18.06:0,18,1473
chr10	55724071	.	ACT	A	97.17	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=5.961;DP=305;FS=50.789;HRun=0;HaplotypeScore=53.4933;InbreedingCoeff=0.0584;MQ=63.01;MQ0=5;MQRankSum=-6.062;QD=0.81;ReadPosRankSum=-2.455;VQSLOD=-0.5981;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:17.38:0,17,399	0/1:7,0:7:28.86:29,0,53	0/0:19,0:12:34.86:0,35,439	0/0:13,0:11:10.97:0,11,226	0/0:10,0:10:24.04:0,24,306	0/0:13,0:13:12.04:0,12,175	0/0:5,0:5:9.50:0,10,122	0/0:7,0:6:18.06:0,18,243	0/1:7,0:7:2.95:3,0,115	0/1:17,0:16:7.15:7,0,543	0/1:12,0:12:45.56:46,0,260	1/1:9,0:9:11.36:58,11,0	0/0:1,0:1:3.01:0,3,47	0/0:14,0:14:32.32:0,32,456	0/0:14,0:14:6.84:0,7,348	0/0:10,0:10:30.06:0,30,403	0/1:8,0:8:8.61:9,0,30	0/1:2,0:2:8.61:9,0,39	0/0:10,0:7:21.07:0,21,316	0/0:12,7:19:9.28:0,9,479	0/0:12,0:12:27.07:0,27,393	1/1:4,0:4:5.55:28,6,0	0/1:16,0:15:32.07:32,0,38	0/0:7,0:7:0:0,0,0	0/0:10,0:10:1.59:0,2,171	0/1:19,0:19:18.23:18,0,641	0/1:19,0:18:3.37:3,0,209	0/0:10,0:10:21.07:0,21,293
chr10	55724532	.	GATAATA	G	1859.04	PASS	AB=0.854;AC=33;AF=0.786;AN=42;BaseQRankSum=4.078;DP=250;FS=4.387;HRun=0;HaplotypeScore=52.1355;InbreedingCoeff=0.2659;MQ=63.34;MQ0=0;MQRankSum=-3.241;QD=11.13;ReadPosRankSum=-0.668;VQSLOD=1.6072;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:7,0:12:3.01:42,3,0	0/1:4,0:4:11.98:12,0,19	./.	./.	1/1:1,0:2:3.01:42,3,0	0/1:2,6:9:6.45:173,0,6	1/1:5,2:7:3.01:62,3,0	0/0:26,0:25:6.92:0,7,51	./.	1/1:5,0:5:2.96:19,3,0	1/1:3,2:5:6.02:123,6,0	1/1:5,0:5:3.01:31,3,0	0/0:7,0:7:12.03:0,12,320	0/0:12,0:13:14.98:0,15,362	1/1:4,3:7:5.95:80,6,0	1/1:9,0:13:6.49:85,6,0	0/1:20,0:20:22.55:23,0,27	1/1:13,0:13:3:28,3,0	1/1:2,7:9:21.02:320,21,0	1/1:8,1:9:3.01:62,3,0	./.	./.	./.	./.	1/1:5,8:14:18.06:327,18,0	1/1:4,3:7:9.03:183,9,0	1/1:11,2:14:20.94:278,21,0	1/1:4,7:12:6.02:104,6,0
chr10	55724567	.	TAATGATAATAATAATAAC	T	1244.83	PASS	AB=1.000;AC=9;AF=0.188;AN=48;BaseQRankSum=-4.920;DP=193;FS=1.899;HRun=0;HaplotypeScore=97.6851;InbreedingCoeff=0.4293;MQ=51.40;MQ0=1;MQRankSum=2.725;QD=20.08;ReadPosRankSum=-4.421;VQSLOD=0.7393;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:8.35:0,8,134	0/0:2,0:2:6.01:0,6,145	0/0:1,0:1:3.01:0,3,39	./.	0/0:5,0:5:6.96:0,7,151	0/0:8,0:8:12.04:0,12,452	0/0:3,0:3:1.24:0,1,97	0/1:24,0:23:5.38:813,0,5	./.	0/0:6,0:6:9.97:0,10,289	0/0:5,0:5:3.80:0,4,198	1/1:0,6:6:3.01:156,3,0	0/0:5,0:5:15.05:0,15,1095	0/0:7,0:7:21.07:0,21,1091	0/0:7,0:7:10.92:0,11,466	0/0:8,0:8:11.51:0,12,274	1/1:2,17:19:5.85:169,6,0	1/1:0,9:9:3.01:156,3,0	0/0:12,0:11:19.42:0,19,694	0/0:3,0:3:3.48:0,3,100	0/0:3,0:3:3.48:0,3,59	./.	./.	1/1:0,4:4:3.01:73,3,0	0/0:14,0:14:21.07:0,21,718	0/0:6,0:6:15.52:0,16,520	0/0:11,0:10:27.49:0,27,577	0/0:12,0:12:4.72:0,5,136
chr10	55725366	.	CAAACA	C	4623.66	PASS	AB=0.800;AC=31;AF=0.596;AN=52;BaseQRankSum=6.059;DP=667;FS=7.629;HRun=0;HaplotypeScore=137.9203;InbreedingCoeff=0.7881;MQ=57.85;MQ0=9;MQRankSum=2.298;QD=12.26;ReadPosRankSum=1.405;VQSLOD=3.9185;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:30:3.01:35,3,0	0/0:10,0:13:21.07:0,21,480	./.	0/0:22,0:12:0:0,0,0	1/1:19,0:29:3.75:55,4,0	1/1:10,7:16:21.07:368,21,0	1/1:13,6:19:10.24:207,10,0	./.	1/1:9,6:15:18.06:315,18,0	1/1:18,3:21:9.03:158,9,0	1/1:19,5:24:12.04:210,12,0	0/0:25,0:29:30.07:0,30,595	0/0:25,0:25:36.11:0,36,865	0/0:18,0:18:33.11:0,33,877	1/1:18,10:28:21.07:368,21,0	1/1:16,0:24:15.04:175,15,0	0/0:22,0:26:18.95:0,19,448	0/0:20,0:20:18.04:0,18,371	1/1:10,5:15:15.05:263,15,0	1/1:19,8:27:11.33:209,11,0	1/1:25,11:36:27.09:473,27,0	0/0:27,0:29:27.08:0,27,564	0/0:27,0:27:30.10:0,30,736	0/0:30,0:33:5.97:0,6,72	0/1:15,5:20:99:180,0,465	1/1:14,8:22:24.08:420,24,0	1/1:24,16:39:48.16:840,48,0	1/1:3,6:10:21.07:350,21,0
chr10	55725584	.	G	GA	5236.86	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-13.797;DP=611;FS=0.000;HRun=5;HaplotypeScore=68.7058;InbreedingCoeff=0.9897;MQ=72.55;MQ0=2;MQRankSum=-0.629;QD=32.94;ReadPosRankSum=-0.272;VQSLOD=5.0671;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:93.11:0,93,967	1/1:1,5:6:9.03:117,9,0	0/0:27,0:21:42.27:0,42,396	0/0:19,0:13:22.70:0,23,282	0/0:19,0:19:54.12:0,54,568	0/0:24,0:23:63.12:0,63,658	0/0:22,0:22:51.10:0,51,538	1/1:2,35:37:99:1311,105,0	0/0:15,0:15:39.07:0,39,403	0/0:22,0:22:60.14:0,60,633	0/0:18,0:18:47.42:0,47,463	1/1:3,22:25:57.18:738,57,0	0/0:16,0:16:45.10:0,45,474	0/0:24,0:24:63.12:0,63,652	0/0:23,0:23:66.12:0,66,685	0/0:19,0:19:54.07:0,54,552	1/1:0,20:20:57.19:740,57,0	1/1:1,17:18:45.15:583,45,0	0/0:26,0:26:75.12:0,75,767	0/0:23,0:23:66.15:0,66,694	0/0:22,0:22:60.12:0,60,628	1/1:2,16:18:48.11:604,48,0	1/1:1,14:15:39.13:507,39,0	1/1:1,19:20:51.08:638,51,0	0/0:23,0:23:69.16:0,69,733	0/0:28,0:28:84.18:0,84,881	0/0:34,0:34:99:0,99,1050	0/0:13,0:13:39.07:0,39,403
chr10	55725603	.	AT	A	2496.62	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=4.807;DP=622;FS=0.459;HRun=1;HaplotypeScore=74.2471;InbreedingCoeff=0.9878;MQ=76.73;MQ0=0;MQRankSum=-2.496;QD=32.42;ReadPosRankSum=1.691;VQSLOD=3.3979;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,31:33:81.10:1079,81,0	0/0:5,0:5:11.78:0,12,133	0/0:21,3:22:25.94:0,26,593	0/0:13,0:13:29.75:0,30,378	1/1:1,20:21:53.86:720,54,0	0/0:21,0:20:60.17:0,60,801	0/0:19,0:19:57.15:0,57,742	0/0:38,0:38:99:0,114,1458	0/0:18,0:18:54.16:0,54,734	0/0:22,0:22:66.21:0,66,899	0/0:22,0:22:66.19:0,66,885	0/0:21,0:21:54.17:0,54,734	0/0:16,0:16:48.15:0,48,650	0/0:22,0:22:66.17:0,66,860	0/0:24,0:24:72.23:0,72,985	1/1:6,17:23:63.73:841,64,0	0/0:29,0:29:84.11:0,84,1053	0/0:18,0:18:48.12:0,48,631	0/0:26,0:26:75.20:0,75,963	0/0:24,0:24:72.17:0,72,919	0/0:20,0:20:60.17:0,60,801	0/0:18,0:18:53.98:0,54,704	0/0:18,0:18:48.13:0,48,633	0/0:20,0:20:48.13:0,48,631	0/0:24,0:24:72.21:0,72,970	0/0:32,0:32:96.27:0,96,1284	0/0:38,0:38:99:0,114,1475	0/0:13,0:13:39.13:0,39,544
chr10	55726054	.	C	CTT	2525.48	PASS	AB=1.000;AC=33;AF=0.589;AN=56;BaseQRankSum=1.548;DP=656;FS=5.089;HRun=8;HaplotypeScore=137.5490;InbreedingCoeff=0.9112;MQ=72.02;MQ0=2;MQRankSum=4.500;QD=6.31;ReadPosRankSum=0.900;VQSLOD=0.1567;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:1,0:22:33:144,33,0	0/1:11,0:11:5.68:6,0,38	0/0:24,2:19:16.92:0,17,239	0/0:21,0:18:19.13:0,19,266	1/1:0,0:20:44.39:152,44,0	1/1:4,0:24:16.85:129,17,0	1/1:1,0:14:27.45:94,27,0	0/0:35,0:35:10.64:0,11,369	1/1:5,0:23:4.32:87,4,0	1/1:3,0:31:67.25:232,67,0	1/1:2,0:23:46.83:161,47,0	0/0:33,0:33:82.40:0,82,712	0/0:21,0:21:48.10:0,48,534	0/0:28,0:28:81.01:0,81,862	1/1:1,0:27:52.28:180,52,0	1/1:4,0:29:24.68:156,25,0	0/0:15,0:15:41.88:0,42,360	0/0:14,0:14:32.98:0,33,307	1/1:2,0:36:86.28:304,86,0	1/1:2,0:28:63.13:250,63,0	1/1:2,0:16:34.81:120,35,0	0/0:22,0:22:56.14:0,56,448	0/0:28,0:27:44.70:0,45,316	0/0:13,0:13:25.67:0,26,173	1/1:3,1:24:52.67:219,53,0	1/1:2,0:29:67.62:251,68,0	1/1:5,0:30:57.14:197,57,0	1/1:1,0:13:19.59:68,20,0
chr10	55726075	.	G	GTTTTTT	7282.89	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-6.666;DP=660;FS=14.821;HRun=7;HaplotypeScore=165.6570;InbreedingCoeff=0.9960;MQ=64.43;MQ0=2;MQRankSum=-8.987;QD=38.13;ReadPosRankSum=0.935;VQSLOD=1.2152;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:21:57.18:0,57,1047	1/1:1,0:10:18.06:279,18,0	0/0:20,0:13:38.86:0,39,657	0/0:21,0:18:32.48:0,32,535	0/0:22,0:22:51.05:0,51,928	0/0:23,0:23:60.15:0,60,1152	0/0:14,0:14:39.12:0,39,734	1/1:2,0:32:26.52:874,27,0	0/0:20,0:20:42.10:0,42,773	0/0:32,0:32:78.18:0,78,1450	0/0:23,0:23:63.18:0,63,1132	1/1:13,18:34:46.38:1409,46,0	0/0:21,0:21:63.15:0,63,1089	0/0:25,0:25:69.22:0,69,1305	0/0:32,0:32:75.12:0,75,1330	0/0:31,0:31:70.90:0,71,1336	1/1:3,0:21:36.12:794,36,0	1/1:2,0:14:21.07:464,21,0	0/0:27,0:27:50.96:0,51,966	0/0:29,0:29:75.19:0,75,1370	0/0:15,0:15:45.14:0,45,831	1/1:4,23:30:42.14:1340,42,0	1/1:4,22:31:48.16:1412,48,0	1/1:2,15:18:24.08:712,24,0	0/0:23,0:23:66.22:0,66,1230	0/0:26,0:26:75.24:0,75,1402	0/0:34,0:34:90.21:0,90,1587	0/0:10,0:10:18.06:0,18,342
chr10	55735616	.	C	CGTGTGTGTGT	8274.57	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=1.742;DP=776;FS=0.000;HRun=0;HaplotypeScore=269.5070;InbreedingCoeff=0.5414;MQ=62.60;MQ0=3;MQRankSum=-4.990;QD=12.75;ReadPosRankSum=-3.668;VQSLOD=2.8359;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:38,0:47:5.40:166,5,0	1/1:8,0:9:5.80:159,6,0	0/0:37,0:21:3.47:0,3,28	0/0:47,0:34:16.48:0,16,243	1/1:17,0:17:2.65:89,3,0	1/1:20,0:22:2.71:130,3,0	1/1:28,2:30:3.01:149,3,0	1/1:33,0:33:47.98:1050,48,0	1/1:22,0:27:8.68:390,9,0	1/1:27,0:26:29.88:705,30,0	1/1:17,0:17:6:73,6,0	1/1:30,0:30:18.03:310,18,0	0/0:20,0:22:39.12:0,39,1018	0/0:20,0:21:30.09:0,30,796	1/1:30,0:35:8.10:390,8,0	1/1:33,6:42:24.62:896,25,0	1/1:26,0:28:14.85:180,15,0	1/1:15,0:15:12.04:394,12,0	1/1:24,0:24:29.43:691,29,0	1/1:22,0:22:8.65:160,9,0	1/1:43,0:55:2.79:114,3,0	1/1:13,0:12:5.66:206,6,0	1/1:15,0:15:1.92:67,2,0	1/1:36,0:39:2.97:86,3,0	1/1:21,1:27:3.48:118,3,0	1/1:25,0:30:39.08:1115,39,0	1/1:29,0:32:12.98:367,13,0	1/1:6,0:6:11.25:271,11,0
chr10	55735853	.	A	ACTCT	3653.26	PASS	AB=0.784;AC=22;AF=0.407;AN=54;BaseQRankSum=-4.364;DP=544;FS=8.291;HRun=0;HaplotypeScore=99.7722;InbreedingCoeff=0.7871;MQ=60.83;MQ0=14;MQRankSum=-0.127;QD=16.91;ReadPosRankSum=-2.304;VQSLOD=2.3274;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:38.83:0,39,541	0/0:3,0:3:9.03:0,9,127	0/0:53,0:22:53.88:0,54,709	0/0:65,0:32:65.34:0,65,1080	0/0:19,0:19:25.92:0,26,643	0/1:5,16:21:0:0,0,0	1/1:0,12:12:3.01:36,3,0	0/0:13,0:13:36.11:0,36,572	1/1:14,0:13:6.02:130,6,0	1/1:26,0:26:60.16:1000,60,0	./.	0/0:18,0:18:24.08:0,24,348	0/0:23,0:23:63.17:0,63,1009	0/0:22,0:22:57.19:0,57,933	1/1:14,0:14:6.02:92,6,0	0/0:19,0:19:41.99:0,42,550	0/0:16,0:16:24.08:0,24,342	0/0:14,0:14:36.59:0,37,517	1/1:3,15:17:45.13:724,45,0	1/1:4,20:26:9.03:151,9,0	1/1:13,0:12:21.04:298,21,0	0/0:6,0:6:5.91:0,6,80	0/0:11,0:11:11.94:0,12,186	0/0:7,0:7:3.01:0,3,49	0/1:20,0:20:0:0,0,0	1/1:2,22:24:69.02:1048,69,0	1/1:21,0:21:6.96:109,7,0	1/1:7,0:7:3.01:65,3,0
chr10	55735856	.	C	CTCTCTGTGTG	5399.92	PASS	AB=0.637;AC=24;AF=0.429;AN=56;BaseQRankSum=-2.772;DP=604;FS=27.495;HRun=0;HaplotypeScore=158.2200;InbreedingCoeff=0.7399;MQ=58.73;MQ0=18;MQRankSum=-1.030;QD=19.71;ReadPosRankSum=-4.630;VQSLOD=1.3196;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:31:28.45:0,28,544	0/0:2,0:5:9.03:0,9,192	0/0:52,0:21:53.88:0,54,709	0/0:64,0:31:65.34:0,65,1080	0/0:18,0:18:16.91:0,17,723	1/1:23,0:23:3.01:48,3,0	1/1:15,0:14:6.02:91,6,0	0/0:13,0:13:36.05:0,36,608	1/1:7,9:15:6.02:322,6,0	1/1:28,0:28:66.54:1160,67,0	0/0:6,8:17:0:0,0,1	0/0:12,0:18:24.08:0,24,474	0/0:26,0:26:69.19:0,69,1417	0/0:23,0:22:60.19:0,60,1093	1/1:3,0:17:6.49:284,6,0	0/1:13,0:21:34.26:34,0,614	0/0:10,0:18:27.09:0,27,443	0/0:13,0:15:33.49:0,33,594	1/1:20,0:19:51.13:841,51,0	1/1:27,0:27:12.02:175,12,0	1/1:16,0:15:21.05:322,21,0	0/0:1,0:6:6.49:0,6,164	0/0:6,0:11:11.61:0,12,228	0/0:11,0:11:8.33:0,8,303	0/1:5,17:28:0.75:1,0,1	1/1:30,0:30:81.35:1384,81,0	1/1:6,18:25:18.02:576,18,0	1/1:0,6:7:3.01:161,3,0
chr10	55736264	.	G	GT	3787.81	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-11.635;DP=485;FS=7.820;HRun=0;HaplotypeScore=46.6013;InbreedingCoeff=0.9402;MQ=82.87;MQ0=0;MQRankSum=-0.256;QD=42.09;ReadPosRankSum=2.941;VQSLOD=3.8915;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,111,1518	0/0:7,0:6:21.07:0,21,294	0/0:14,0:14:36.05:0,36,465	0/0:22,0:22:55.97:0,56,735	0/0:12,0:12:36.11:0,36,486	0/0:20,0:20:60.19:0,60,823	0/0:22,0:22:66.22:0,66,922	0/0:30,0:30:87.27:0,87,1174	0/0:13,0:13:39.10:0,39,511	0/0:16,0:16:48.16:0,48,670	0/0:1,0:1:3.01:0,3,42	1/1:1,16:17:45.15:719,45,0	0/0:16,0:16:45.15:0,45,617	0/0:17,0:17:51.16:0,51,698	0/0:22,0:22:66.21:0,66,906	0/0:23,0:23:69.17:0,69,911	1/1:1,35:36:96.33:1534,96,0	1/1:0,10:10:24.08:383,24,0	0/0:23,0:23:66.21:0,66,903	0/0:7,0:7:18.06:0,18,251	0/0:42,0:42:99:0,126,1725	1/1:0,10:10:24.08:384,24,0	1/1:0,2:2:6.02:96,6,0	1/1:0,15:15:42.14:671,42,0	0/0:9,0:9:27.09:0,27,377	0/0:18,0:18:54.16:0,54,721	0/0:14,0:14:42.13:0,42,571	0/0:9,0:9:27.03:0,27,322
chr10	55736496	.	GA	G	818.91	PASS	AC=6;AF=0.111;AN=54;BaseQRankSum=6.200;DP=411;FS=6.819;HRun=9;HaplotypeScore=36.4710;InbreedingCoeff=0.8614;MQ=62.50;MQ0=37;MQRankSum=-0.064;QD=14.89;ReadPosRankSum=1.552;VQSLOD=2.8114;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,24:27:60.03:549,60,0	0/0:8,0:8:24.07:0,24,276	0/0:19,0:5:12.46:0,12,90	0/0:17,0:6:8.20:0,8,45	1/1:6,9:13:20.92:191,21,0	0/0:12,0:10:7.74:0,8,289	0/0:5,0:3:6.02:0,6,68	0/0:33,0:32:93.15:0,93,1029	0/0:11,0:9:18.04:0,18,196	0/0:8,0:7:12.04:0,12,138	0/0:7,0:4:12.03:0,12,136	0/0:12,0:10:24.06:0,24,267	0/0:6,0:5:12.04:0,12,139	0/0:10,0:8:24.06:0,24,268	0/0:14,0:14:36.09:0,36,405	1/1:2,9:9:24.01:220,24,0	0/0:34,0:31:81.24:0,81,934	0/0:21,0:19:36.11:0,36,415	0/0:23,0:20:48.14:0,48,553	0/0:12,0:10:21.02:0,21,225	0/0:7,0:7:21.06:0,21,242	./.	0/0:8,0:5:12.04:0,12,138	0/0:14,0:11:26.93:0,27,278	0/0:13,0:13:33.10:0,33,381	0/0:14,0:14:42.12:0,42,485	0/0:25,0:23:58.98:0,59,659	0/0:18,0:18:30.44:0,30,464
chr10	55736708	.	C	CGTGT	5125.17	PASS	AB=0.782;AC=43;AF=0.827;AN=52;BaseQRankSum=0.692;DP=511;FS=7.128;HRun=0;HaplotypeScore=99.0943;InbreedingCoeff=0.4109;MQ=60.04;MQ0=3;MQRankSum=-4.083;QD=11.31;ReadPosRankSum=-1.481;VQSLOD=3.5011;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:17,18:43:11.78:226,12,0	0/0:2,0:3:5.75:0,6,40	./.	./.	1/1:9,4:17:5.54:25,6,0	1/1:1,0:12:9.03:156,9,0	1/1:11,9:23:6.02:123,6,0	0/1:26,0:26:37.87:169,0,38	1/1:6,1:20:18.06:308,18,0	1/1:20,0:19:35.96:455,36,0	1/1:10,0:21:9.58:117,10,0	1/1:15,0:17:29.97:337,30,0	0/0:12,0:14:27:0,27,354	0/0:13,0:17:23.58:0,24,450	1/1:11,2:23:17.71:216,18,0	0/1:9,13:23:20.33:540,0,20	1/1:16,1:18:20.98:238,21,0	0/1:13,8:21:12.95:134,0,13	1/1:22,0:23:23.72:275,24,0	1/1:11,0:11:8.90:123,9,0	1/1:15,9:25:8.66:154,9,0	1/1:13,3:16:27.06:449,27,0	1/1:5,0:9:3.01:67,3,0	1/1:6,0:13:6.02:104,6,0	1/1:6,0:10:11.83:170,12,0	1/1:10,1:20:20.96:264,21,0	1/1:11,1:27:21.52:355,22,0	1/1:12,0:12:6.02:119,6,0
chr10	55736741	.	G	GTGTGTGT	2718.30	PASS	AB=1.000;AC=24;AF=0.429;AN=56;BaseQRankSum=9.601;DP=497;FS=17.947;HRun=0;HaplotypeScore=123.7561;InbreedingCoeff=-0.4915;MQ=59.28;MQ0=7;MQRankSum=-5.984;QD=6.61;ReadPosRankSum=2.214;VQSLOD=1.1709;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:41,0:41:18.91:19,0,341	0/0:3,0:3:5.75:0,6,71	0/0:14,0:6:11.40:0,11,113	0/0:19,0:7:15.01:0,15,158	0/1:13,0:13:3.85:4,0,119	1/1:10,0:9:9.03:225,9,0	0/1:25,0:25:99:130,0,166	0/1:30,0:30:32.22:32,0,845	0/1:14,0:14:52.36:387,0,52	0/1:21,0:20:99:248,0,275	0/1:19,0:18:99:112,0,170	0/1:16,0:16:99:250,0,122	0/0:15,0:15:42.12:0,42,781	0/0:21,0:21:45.11:0,45,925	0/1:22,0:21:99:195,0,224	0/1:17,0:17:99:120,0,193	0/1:18,0:18:99:117,0,212	0/1:16,0:16:17.04:17,0,213	0/1:19,0:14:99:193,0,145	0/1:10,0:10:75.26:75,0,135	0/1:31,0:31:15.44:15,0,401	0/1:15,0:15:10.89:142,0,11	0/0:14,0:13:4.71:0,5,200	0/1:18,0:18:85.99:86,0,275	0/1:19,0:19:99:108,0,388	0/1:10,0:10:93.04:93,0,167	0/1:17,0:17:99:205,0,129	1/1:2,1:10:5.91:106,6,0
chr10	55736892	.	TACC	T	2885.11	PASS	AB=0.984;AC=21;AF=0.375;AN=56;BaseQRankSum=7.942;DP=479;FS=0.361;HRun=0;HaplotypeScore=98.8829;InbreedingCoeff=0.6065;MQ=70.37;MQ0=0;MQRankSum=-4.863;QD=12.44;ReadPosRankSum=8.364;VQSLOD=2.1625;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:33:52.16:0,52,374	0/0:9,0:10:23.90:0,24,237	0/0:24,0:17:31.18:0,31,667	0/0:12,0:9:23.97:0,24,436	0/0:21,0:21:38.14:0,38,230	1/1:17,0:17:31.13:233,31,0	0/1:21,0:21:39.61:224,0,40	0/0:24,0:24:64.06:0,64,679	1/1:15,0:15:41.23:293,41,0	1/1:14,0:13:8.35:172,8,0	1/1:10,0:10:23.46:155,23,0	0/0:12,0:12:36.02:0,36,623	0/0:13,0:13:38.91:0,39,618	0/0:14,0:14:42.12:0,42,834	0/1:23,1:24:49.46:292,0,49	0/0:21,0:21:58.32:0,58,357	0/0:16,0:16:48.11:0,48,924	0/0:12,0:12:30.07:0,30,504	0/1:6,0:6:25.33:60,0,25	1/1:19,1:20:11.99:288,12,0	0/1:23,0:23:13.69:210,0,14	0/0:8,0:8:21.07:0,21,347	0/0:13,0:13:36.12:0,36,667	0/0:13,0:13:36.92:0,37,601	1/1:13,0:13:23.22:183,23,0	0/1:22,1:23:17.01:261,0,17	1/1:32,1:33:47.34:525,47,0	1/1:11,2:13:31.80:195,32,0
chr10	55736893	.	ACCC	A	6908.65	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-3.494;DP=476;FS=0.429;HRun=11;HaplotypeScore=86.5474;InbreedingCoeff=0.9903;MQ=70.35;MQ0=0;MQRankSum=-6.296;QD=30.04;ReadPosRankSum=6.265;VQSLOD=4.0051;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:33:23.81:0,24,69	0/0:3,0:10:17.90:0,18,134	0/0:24,0:17:22.64:0,23,545	0/0:12,0:9:27.05:0,27,418	0/0:2,0:21:21.35:0,21,47	1/1:1,16:17:39.12:509,39,0	1/1:4,17:21:39.11:509,39,0	0/0:12,0:23:36.95:0,37,295	1/1:0,15:15:42.14:552,42,0	1/1:2,12:13:36.10:457,36,0	1/1:1,9:10:24.07:306,24,0	0/0:11,0:11:27.07:0,27,462	0/0:13,0:13:30.05:0,30,526	0/0:13,0:14:36.12:0,36,709	1/1:6,18:24:48.12:630,48,0	0/0:6,0:21:17.44:0,17,38	0/0:17,0:17:45.15:0,45,883	0/0:10,0:12:24.06:0,24,397	1/1:2,4:6:12.03:157,12,0	1/1:3,16:20:48.07:606,48,0	1/1:2,20:22:48.14:625,48,0	0/0:7,0:7:21.04:0,21,331	0/0:14,0:14:38.16:0,38,684	0/0:13,0:13:27.05:0,27,496	1/1:2,11:13:30.07:394,30,0	1/1:6,17:23:50.71:637,51,0	1/1:2,30:32:84.27:1100,84,0	1/1:2,11:13:32.76:424,33,0
chr10	55737641	.	TCACACACACACACACCCACA	T	1431.03	PASS	AB=0.996;AC=22;AF=0.393;AN=56;BaseQRankSum=-4.263;DP=649;FS=8.593;HRun=0;HaplotypeScore=275.4910;InbreedingCoeff=-0.2014;MQ=61.55;MQ0=31;MQRankSum=1.066;QD=3.12;ReadPosRankSum=-0.889;VQSLOD=1.0001;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:44,0:45:0:0,0,0	1/1:0,0:7:8.69:307,9,0	0/1:50,0:15:23.59:24,0,67	0/0:52,0:18:1.31:0,1,68	0/1:19,0:18:19.02:19,0,159	0/0:16,0:16:9.03:0,9,274	0/1:28,0:27:7.94:8,0,284	1/1:9,10:18:29.53:322,30,0	0/0:16,0:16:21.05:0,21,594	0/0:18,0:15:4.98:0,5,559	0/1:15,0:15:25.97:97,0,26	0/0:15,0:15:14.62:0,15,152	0/0:25,0:24:52.84:0,53,3256	0/0:23,0:24:60.18:0,60,3954	0/1:28,0:28:99:112,0,2258	1/1:34,0:35:13.40:233,13,0	0/1:35,0:35:8.35:8,0,27	0/0:12,0:12:8.57:0,9,48	0/1:13,0:11:60.26:60,0,340	0/1:20,0:20:11.97:12,0,122	0/1:25,0:24:22.35:22,0,597	0/1:16,0:15:78.79:79,0,115	0/1:28,0:27:86.55:87,0,251	0/1:33,0:33:17.72:18,0,384	0/0:12,0:12:9.03:0,9,222	0/1:18,0:18:66.70:67,0,595	0/1:19,0:17:99:102,0,240	0/1:5,0:5:21.20:21,0,41
chr10	55737643	.	ACACACACACACACC	A	4223.60	PASS	AB=1.000;AC=36;AF=0.643;AN=56;BaseQRankSum=-2.923;DP=667;FS=10.398;HRun=0;HaplotypeScore=218.2750;InbreedingCoeff=0.0473;MQ=59.89;MQ0=40;MQRankSum=-0.377;QD=7.72;ReadPosRankSum=1.163;VQSLOD=2.5965;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:53,0:51:0:0,0,0	1/1:7,0:7:8.76:301,9,0	0/1:48,0:13:23.59:24,0,67	0/0:52,0:18:1.31:0,1,68	1/1:16,3:17:15.64:212,16,0	0/0:18,0:18:11.13:0,11,78	0/1:30,0:28:8.09:8,0,61	1/1:20,0:18:20.97:178,21,0	0/1:17,0:17:23.38:23,0,194	0/1:20,0:16:99:166,0,155	1/1:14,0:14:15.76:117,16,0	1/1:20,0:18:11.53:249,12,0	0/0:25,0:24:52.74:0,53,2302	0/0:25,0:25:63.19:0,63,2987	0/1:27,0:27:99:141,0,1245	1/1:13,22:35:29.78:1132,30,0	1/1:35,1:36:8.81:138,9,0	1/1:12,0:12:9.03:188,9,0	0/1:13,0:10:60.17:108,0,60	0/1:20,0:20:11.97:12,0,45	0/1:24,0:23:36.21:36,0,130	1/1:17,0:15:22.55:205,23,0	1/1:27,1:27:31.92:296,32,0	1/1:32,0:32:7.41:213,7,0	0/1:14,0:14:23.30:36,0,23	0/1:18,0:18:99:124,0,134	0/1:18,0:16:64.73:243,0,65	1/1:5,0:5:8.95:73,9,0
chr10	55737645	.	ACACACACACACC	A	5377.62	PASS	AB=0.949;AC=39;AF=0.696;AN=56;BaseQRankSum=-1.746;DP=672;FS=9.217;HRun=0;HaplotypeScore=199.1365;InbreedingCoeff=0.0610;MQ=58.59;MQ0=44;MQRankSum=-2.352;QD=9.45;ReadPosRankSum=-0.090;VQSLOD=2.7585;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:6,46:50:0:0,0,0	1/1:7,0:7:8.76:259,9,0	0/1:45,0:10:23.59:24,0,67	0/0:50,0:16:1.31:0,1,68	1/1:15,4:17:17.24:185,17,0	1/1:21,0:20:8.30:39,8,0	0/1:31,0:29:21.60:23,0,22	1/1:20,0:18:23.95:199,24,0	0/1:17,0:17:99:119,0,102	0/1:25,1:22:6.88:406,0,7	1/1:12,0:12:16.11:118,16,0	1/1:6,15:18:15:450,15,0	0/0:26,0:25:53.53:0,54,2001	0/0:27,0:26:66.18:0,66,2636	0/1:29,0:29:99:153,0,1202	1/1:33,2:35:29.91:896,30,0	1/1:11,25:36:8.95:229,9,0	1/1:0,11:11:9.03:324,9,0	0/1:13,0:10:13.11:155,0,13	0/1:21,0:21:11.98:12,0,21	0/1:23,0:22:27.71:61,0,28	1/1:11,5:14:21.31:214,21,0	1/1:23,5:27:37.35:432,37,0	1/1:25,5:30:30.91:450,31,0	1/1:14,0:14:1.81:91,2,0	0/1:19,0:18:19.60:166,0,20	0/1:17,1:16:3.63:280,0,4	1/1:5,0:5:11.95:93,12,0
chr10	55737647	.	ACACACACACC	A	5633.50	PASS	AB=0.980;AC=45;AF=0.804;AN=56;BaseQRankSum=-1.192;DP=668;FS=14.864;HRun=0;HaplotypeScore=182.6904;InbreedingCoeff=0.3646;MQ=58.44;MQ0=47;MQRankSum=-1.912;QD=9.99;ReadPosRankSum=0.330;VQSLOD=2.5142;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:52,0:50:0:0,0,0	1/1:7,0:7:8.89:218,9,0	0/1:45,0:10:23.59:24,0,67	0/0:50,0:16:1.31:0,1,68	1/1:19,0:17:14.95:142,15,0	1/1:21,1:21:12.03:161,12,0	1/1:30,1:29:9.80:86,10,0	1/1:17,0:15:23.95:199,24,0	0/1:16,2:18:61.37:312,0,61	1/1:25,1:22:39.67:538,40,0	1/1:10,1:11:17.87:140,18,0	1/1:21,0:18:15:317,15,0	0/0:26,0:25:53.24:0,53,1699	0/0:28,0:27:69.19:0,69,2295	0/1:28,0:28:99:156,0,885	1/1:33,0:33:29.60:738,30,0	1/1:35,1:36:8.93:163,9,0	1/1:11,0:11:9.03:224,9,0	1/1:11,1:9:21.51:296,22,0	1/1:19,0:19:1.02:15,1,0	1/1:23,0:21:22.47:174,22,0	1/1:17,0:14:18.48:168,18,0	1/1:27,0:26:38.87:363,39,0	1/1:31,0:30:22.98:289,23,0	1/1:2,11:13:8.99:207,9,0	1/1:21,0:20:32.98:351,33,0	0/1:19,0:17:13.75:256,0,14	1/1:5,0:5:13.99:99,14,0
chr10	55737649	.	ACACACACC	A	6081.79	PASS	AB=0.886;AC=46;AF=0.821;AN=56;BaseQRankSum=-1.278;DP=669;FS=9.570;HRun=0;HaplotypeScore=168.1286;InbreedingCoeff=0.4356;MQ=57.40;MQ0=50;MQRankSum=-3.768;QD=10.73;ReadPosRankSum=-0.414;VQSLOD=2.9686;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:52,0:50:0:0,0,0	1/1:7,0:7:8.58:176,9,0	0/1:45,0:10:23.59:24,0,67	0/0:48,0:15:1.31:0,1,68	1/1:18,0:16:15.45:144,15,0	1/1:4,19:22:12.02:218,12,0	1/1:10,21:29:9.41:175,9,0	1/1:17,0:15:23.95:199,24,0	0/1:3,15:18:39.70:461,0,40	1/1:6,20:23:60.34:676,60,0	1/1:11,1:12:17.85:140,18,0	1/1:20,0:17:15:262,15,0	0/0:27,0:25:53.16:0,53,1390	0/0:27,0:26:69.19:0,69,1888	0/1:28,0:28:99:178,0,535	1/1:32,0:32:29.64:598,30,0	1/1:33,0:33:8.95:135,9,0	1/1:11,0:11:9.03:182,9,0	1/1:13,0:10:25.05:286,25,0	1/1:4,14:18:1.69:16,2,0	1/1:21,1:20:23.60:149,24,0	1/1:17,0:14:23.92:195,24,0	1/1:27,0:26:37.52:337,38,0	1/1:32,0:31:35.53:384,36,0	1/1:12,1:13:9.02:186,9,0	1/1:25,0:23:57.25:541,57,0	1/1:21,1:18:18.58:280,19,0	1/1:5,0:5:14.96:143,15,0
chr10	55737655	.	ACC	A	5461.23	PASS	AB=1.000;AC=47;AF=0.839;AN=56;BaseQRankSum=-1.102;DP=684;FS=1.249;HRun=3;HaplotypeScore=135.3359;InbreedingCoeff=0.6259;MQ=54.73;MQ0=59;MQRankSum=-1.282;QD=10.19;ReadPosRankSum=-2.267;VQSLOD=0.8033;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:48:0:0,0,0	1/1:7,0:7:8.61:51,9,0	0/1:43,0:8:23.59:24,0,67	0/0:44,0:10:1.30:0,1,66	1/1:20,0:18:19.79:152,20,0	1/1:21,0:20:11.89:85,12,0	1/1:27,0:25:8.63:53,9,0	1/1:14,0:11:23.95:199,24,0	1/1:18,0:18:15.15:118,15,0	1/1:25,0:21:60.16:457,60,0	1/1:18,0:18:29.62:237,30,0	1/1:19,0:16:14.78:94,15,0	0/0:26,0:24:53.27:0,53,583	0/0:28,0:27:41.45:0,41,763	1/1:22,7:28:61.80:749,62,0	1/1:28,0:28:29.23:179,29,0	1/1:30,0:29:8.73:55,9,0	1/1:12,0:11:8.87:57,9,0	1/1:12,1:10:29.17:236,29,0	1/1:15,2:17:5.79:40,6,0	1/1:31,0:27:47.88:385,48,0	1/1:24,1:20:26.31:216,26,0	1/1:29,0:28:53.88:439,54,0	1/1:34,0:33:53.49:421,53,0	1/1:12,0:12:8.85:57,9,0	1/1:29,0:25:71.62:584,72,0	1/1:28,0:23:54.03:410,54,0	1/1:7,0:7:20.93:165,21,0
chr10	55737850	.	AAAC	A	3088.72	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=6.591;DP=669;FS=15.542;HRun=0;HaplotypeScore=133.6421;InbreedingCoeff=0.9943;MQ=83.48;MQ0=0;MQRankSum=-5.229;QD=36.34;ReadPosRankSum=1.439;VQSLOD=3.9762;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,31:32:81.27:1282,81,0	0/0:19,0:19:54.19:0,54,1196	0/0:25,0:25:66.23:0,66,1414	0/0:19,0:19:54.19:0,54,1085	1/1:2,22:24:51.09:774,51,0	0/0:20,0:20:54.19:0,54,1184	0/0:24,0:24:66.23:0,66,1474	0/0:36,0:36:96.31:0,96,2027	0/0:25,0:25:69.19:0,69,1483	0/0:33,0:33:93.31:0,93,2010	0/0:16,0:16:48.16:0,48,1072	0/0:25,0:25:69.24:0,69,1519	0/0:23,0:23:60.21:0,60,1317	0/0:24,0:24:72.25:0,72,1558	0/0:22,0:22:66.20:0,66,1408	1/1:4,25:29:72.25:1176,72,0	0/0:39,0:39:99:0,111,2436	0/0:15,0:15:42.11:0,42,874	0/0:14,0:14:42.14:0,42,926	0/0:27,0:27:78.27:0,78,1742	0/0:30,0:30:84.28:0,84,1793	0/0:15,0:15:45.15:0,45,1006	0/0:26,0:26:63.22:0,63,1390	0/0:34,0:34:99:0,99,2120	0/0:19,0:19:48.16:0,48,1072	0/0:29,0:29:84.29:0,84,1828	0/0:20,0:19:54.19:0,54,1194	0/0:5,0:5:15.05:0,15,335
chr10	55737994	.	T	TG	6751.72	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-6.814;DP=655;FS=1.937;HRun=2;HaplotypeScore=83.1716;InbreedingCoeff=0.9995;MQ=89.89;MQ0=0;MQRankSum=-3.515;QD=37.51;ReadPosRankSum=-0.422;VQSLOD=5.1192;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,108,1302	1/1:0,10:10:24.08:345,24,0	0/0:26,0:26:78.03:0,78,877	0/0:27,0:26:53.72:0,54,698	0/0:29,0:29:75.23:0,75,929	0/0:21,0:21:60.19:0,60,743	0/0:17,0:17:48.14:0,48,582	1/1:2,34:36:99:1446,102,0	0/0:14,0:14:42.11:0,42,496	0/0:22,0:22:66.21:0,66,818	0/0:17,0:17:51.08:0,51,602	1/1:2,24:26:63.21:906,63,0	0/0:26,0:26:78.25:0,78,964	0/0:14,0:14:36.11:0,36,446	0/0:21,0:21:60.19:0,60,744	0/0:19,0:19:54.17:0,54,669	1/1:1,34:35:93.31:1338,93,0	1/1:1,14:15:27.29:583,27,0	0/0:24,0:24:69.21:0,69,842	0/0:29,0:29:81.23:0,81,989	0/0:31,0:31:90.26:0,90,1101	1/1:1,18:20:54.13:769,54,0	1/1:0,24:24:57.19:803,57,0	1/1:0,14:14:39.13:561,39,0	0/0:21,0:21:60.19:0,60,742	0/0:26,0:26:78.24:0,78,955	0/0:27,0:26:81.23:0,81,978	0/0:25,0:25:75.21:0,75,912
chr10	55741825	.	T	TA	6044.84	PASS	AB=1.000;AC=46;AF=0.821;AN=56;BaseQRankSum=-0.949;DP=515;FS=2.365;HRun=6;HaplotypeScore=79.6647;InbreedingCoeff=0.6481;MQ=82.80;MQ0=2;MQRankSum=-1.909;QD=15.07;ReadPosRankSum=3.475;VQSLOD=4.6077;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:33:40.12:149,0,40	1/1:5,0:5:5.99:47,6,0	0/0:41,0:30:1.75:0,2,353	0/0:40,0:25:19.54:0,20,202	1/1:8,0:8:10.86:52,11,0	1/1:21,0:21:35.10:264,35,0	1/1:22,0:22:26.89:208,27,0	1/1:25,0:26:42.51:356,43,0	1/1:18,0:19:29.78:240,30,0	1/1:14,0:14:32.67:264,33,0	1/1:16,0:16:25.98:170,26,0	1/1:1,21:22:42.13:528,42,0	0/0:15,0:15:36.06:0,36,361	0/0:17,0:17:33.04:0,33,322	1/1:22,0:22:46.83:346,47,0	0/1:29,0:29:43.15:104,0,43	1/1:2,15:17:33.11:415,33,0	1/1:2,13:15:33.11:415,33,0	1/1:19,0:19:44.55:397,45,0	1/1:6,0:6:11.99:106,12,0	1/1:13,0:13:23.94:191,24,0	1/1:2,9:11:18.06:226,18,0	1/1:2,3:5:8.99:95,9,0	1/1:1,13:14:30.10:377,30,0	1/1:12,0:12:23.85:179,24,0	1/1:29,0:29:69.45:541,69,0	1/1:17,0:17:29.91:237,30,0	1/1:6,0:6:17.92:137,18,0
chr10	55741831	.	A	AAG	9149.10	PASS	AB=0.704;AC=45;AF=0.804;AN=56;BaseQRankSum=-4.733;DP=505;FS=3.589;HRun=0;HaplotypeScore=71.1084;InbreedingCoeff=0.5720;MQ=78.98;MQ0=3;MQRankSum=-2.495;QD=23.16;ReadPosRankSum=5.845;VQSLOD=5.2648;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:6,0:32:37.26:37,0,62	1/1:0,4:4:6.02:117,6,0	0/0:43,0:31:45.60:0,46,592	0/0:38,0:22:31.50:0,32,301	1/1:1,0:7:6.48:17,6,0	1/1:1,16:19:36.12:675,36,0	1/1:0,22:22:27.09:518,27,0	1/1:5,15:25:53.95:713,54,0	1/1:1,18:20:30.07:577,30,0	1/1:0,10:12:36.01:545,36,0	1/1:0,13:16:27.01:391,27,0	1/1:24,0:24:19.18:133,19,0	0/0:14,0:14:42.08:0,42,568	0/0:15,0:15:39.06:0,39,518	1/1:0,19:21:48.16:881,48,0	0/1:6,0:28:56.43:56,0,58	0/1:21,0:20:46.90:89,0,47	1/1:13,0:13:28.56:113,29,0	1/1:1,17:19:57.08:907,57,0	1/1:0,4:5:12.04:210,12,0	1/1:0,14:15:24.55:469,25,0	1/1:9,0:9:1.06:44,1,0	1/1:3,0:3:8.16:40,8,0	1/1:13,0:13:25.96:103,26,0	1/1:1,13:15:24.03:420,24,0	1/1:0,25:27:75.05:1166,75,0	1/1:0,13:14:30.10:583,30,0	1/1:0,9:9:18.06:344,18,0
chr10	55742019	.	TAA	T	1131.44	PASS	AC=26;AF=0.481;AN=54;BaseQRankSum=-0.076;DP=315;FS=16.180;HRun=15;HaplotypeScore=58.0398;InbreedingCoeff=0.7253;MQ=57.86;MQ0=29;MQRankSum=-1.865;QD=7.64;ReadPosRankSum=1.777;VQSLOD=-0.4240;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:22:36.02:0,36,417	1/1:1,3:4:8.95:79,9,0	0/0:14,0:7:21.05:0,21,225	0/0:16,1:7:3.89:0,4,33	0/0:12,0:14:17.53:0,18,196	1/1:9,3:10:8.71:79,9,0	1/1:5,2:6:2.81:26,3,0	1/1:13,10:17:29.73:263,30,0	1/1:4,3:7:8.84:79,9,0	1/1:5,2:5:5.81:53,6,0	1/1:4,4:8:8.80:78,9,0	0/0:6,0:7:2.50:0,2,9	0/0:13,0:10:14.41:0,14,170	0/0:14,0:13:18.01:0,18,205	1/1:14,3:15:5.42:52,5,0	0/0:9,0:8:9.02:0,9,110	0/0:7,0:9:15.96:0,16,85	0/0:3,0:5:12.48:0,12,43	1/1:10,7:13:14.45:132,14,0	0/0:10,0:10:0:0,0,0	0/0:2,0:2:0:0,0,0	0/0:3,0:3:0:0,0,0	0/0:8,0:8:2.50:0,2,9	./.	1/1:2,6:7:11.99:104,12,0	1/1:3,4:5:11.04:104,11,0	1/1:9,5:13:14.54:121,15,0	1/1:9,6:13:17.55:144,18,0
chr10	55743057	.	TAAA	T	5798.91	PASS	AB=0.554;AC=32;AF=0.571;AN=56;BaseQRankSum=-7.296;DP=622;FS=5.394;HRun=15;HaplotypeScore=111.9082;InbreedingCoeff=0.5620;MQ=72.71;MQ0=0;MQRankSum=-3.535;QD=13.97;ReadPosRankSum=2.625;VQSLOD=3.5430;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:33:67.03:0,67,568	0/0:0,0:9:10.44:0,10,36	0/0:26,0:19:22.65:0,23,357	0/0:15,0:11:20.72:0,21,199	0/0:8,0:27:67.03:0,67,530	1/1:5,13:18:29.97:336,30,0	1/1:5,10:15:23.91:253,24,0	0/1:9,2:33:23.91:24,0,124	1/1:1,14:15:39.10:437,39,0	1/1:7,15:24:44.81:472,45,0	1/1:7,19:27:47.87:538,48,0	0/0:3,0:25:16.01:0,16,83	0/0:15,0:16:42.06:0,42,646	0/0:17,0:20:51.11:0,51,805	1/1:5,19:25:21.45:430,21,0	0/1:3,1:20:3.77:4,0,172	0/0:10,1:36:1.52:0,2,75	0/1:5,1:19:12.29:18,0,12	1/1:5,17:22:40.06:506,40,0	1/1:11,15:27:41.73:452,42,0	1/1:2,6:8:8.46:99,8,0	0/1:2,1:21:9.50:35,0,9	0/1:3,2:21:11.40:11,0,60	0/1:5,0:22:8.17:8,0,36	1/1:4,12:16:26.92:301,27,0	1/1:5,29:35:62.86:887,63,0	1/1:6,20:26:30.66:518,31,0	1/1:4,16:21:40.39:468,40,0
chr10	55744004	.	T	TA	4852.18	PASS	AB=0.636;AC=25;AF=0.446;AN=56;BaseQRankSum=-10.161;DP=578;FS=11.447;HRun=11;HaplotypeScore=67.1985;InbreedingCoeff=0.8713;MQ=78.14;MQ0=0;MQRankSum=-1.471;QD=18.66;ReadPosRankSum=1.287;VQSLOD=5.4218;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:41.78:0,42,322	0/0:14,0:14:35.83:0,36,277	0/0:19,0:15:4.48:0,4,50	0/0:16,0:13:9.77:0,10,76	0/0:29,0:29:77.62:0,78,593	1/1:5,21:26:30.87:495,31,0	1/1:3,12:15:30.06:305,30,0	0/0:23,0:24:52.72:0,53,391	1/1:4,14:19:32.97:315,33,0	1/1:2,15:17:42.07:417,42,0	1/1:3,11:14:23.98:231,24,0	0/0:18,0:19:34.88:0,35,259	0/0:28,0:28:44.68:0,45,483	0/0:29,0:29:71.68:0,72,550	1/1:7,20:27:26.45:380,26,0	0/0:24,0:24:56.77:0,57,441	0/0:25,0:27:70.74:0,71,536	0/0:13,0:13:23.88:0,24,186	1/1:9,11:20:36.05:358,36,0	1/1:1,13:15:38.85:367,39,0	0/1:5,8:14:8.21:107,0,8	0/0:18,0:18:44.76:0,45,340	0/0:22,1:23:16.58:0,17,298	0/0:16,0:16:38.80:0,39,297	1/1:0,11:11:17.88:183,18,0	1/1:4,13:17:0.01:327,0,0	1/1:4,33:38:39.28:746,39,0	1/1:5,22:27:25.74:623,26,0
chr10	55744763	.	CT	C	1705.81	PASS	AB=0.969;AC=16;AF=0.286;AN=56;BaseQRankSum=4.711;DP=677;FS=6.774;HRun=12;HaplotypeScore=86.2990;InbreedingCoeff=0.5841;MQ=68.28;MQ0=4;MQRankSum=-0.262;QD=6.93;ReadPosRankSum=0.845;VQSLOD=2.4542;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:39:98.43:0,98,944	0/0:7,0:7:21.04:0,21,213	0/1:42,0:20:18.17:18,0,94	0/0:25,0:18:1.55:0,2,89	0/0:27,1:28:27.74:0,28,447	0/0:13,1:14:18.85:0,19,372	0/0:13,0:14:32.90:0,33,319	0/1:35,4:39:4.12:4,0,618	0/0:12,1:13:3.82:0,4,220	0/0:24,0:24:51.09:0,51,513	0/0:29,0:30:54.70:0,55,690	1/1:14,11:25:62.70:480,63,0	0/0:16,1:18:12.62:0,13,321	0/0:22,2:25:32.86:0,33,473	0/0:29,0:29:25.18:0,25,567	0/0:26,2:28:1.65:0,2,546	1/1:17,14:32:10.73:428,11,0	1/1:5,13:18:8.37:248,8,0	0/1:28,1:30:0.17:0,0,472	0/0:28,1:30:13.26:0,13,448	0/0:19,2:20:21.80:0,22,379	1/1:2,15:18:37.88:284,38,0	1/1:8,12:19:20.42:332,20,0	1/1:0,8:8:8.97:70,9,0	0/0:22,1:23:42.33:0,42,573	0/0:28,3:32:26.30:0,26,585	0/0:30,0:31:45.93:0,46,608	0/1:12,0:12:19.39:19,0,186
chr10	55744873	.	AT	A	12494.21	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=11.592;DP=621;FS=4.300;HRun=6;HaplotypeScore=62.8162;InbreedingCoeff=0.9468;MQ=65.43;MQ0=2;MQRankSum=-2.212;QD=26.70;ReadPosRankSum=1.637;VQSLOD=5.5363;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,111,1419	1/1:1,7:8:18.04:193,18,0	0/0:9,0:7:0.25:0,0,114	0/0:7,0:6:13.59:0,14,145	0/0:29,0:29:75.22:0,75,958	1/1:1,18:19:48.12:516,48,0	1/1:2,16:18:36.09:387,36,0	1/1:2,21:23:60.14:637,60,0	1/1:0,17:17:42.11:451,42,0	1/1:2,16:18:45.11:483,45,0	1/1:1,28:29:72.17:774,72,0	1/1:2,21:23:60.15:645,60,0	0/0:16,0:16:48.16:0,48,632	0/0:25,0:25:72.23:0,72,934	1/1:0,30:30:78.20:838,78,0	0/0:28,0:28:78.25:0,78,1026	1/1:1,28:29:81.20:870,81,0	1/1:0,23:23:57.14:611,57,0	1/1:3,20:23:57.12:604,57,0	1/1:3,23:26:63.09:652,63,0	1/1:6,24:30:66.16:709,66,0	1/1:0,11:11:29.95:294,30,0	1/1:0,23:23:57.14:613,57,0	1/1:0,13:13:36.09:387,36,0	1/1:2,19:21:54.14:580,54,0	1/1:3,31:34:93.21:990,93,0	1/1:2,32:34:81.18:870,81,0	1/1:4,12:16:36.09:387,36,0
chr10	55745277	.	TA	T	5475.35	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=12.258;DP=594;FS=0.328;HRun=10;HaplotypeScore=59.0405;InbreedingCoeff=0.9584;MQ=65.86;MQ0=0;MQRankSum=1.134;QD=20.82;ReadPosRankSum=2.110;VQSLOD=5.7670;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:32:84.14:0,84,913	0/0:2,0:2:6.02:0,6,66	0/0:22,0:20:3.18:0,3,178	0/0:15,0:11:18.70:0,19,167	0/0:23,2:25:20.03:0,20,642	1/1:2,15:17:38.99:339,39,0	1/1:3,7:10:17.98:156,18,0	0/0:29,0:29:63.15:0,63,683	1/1:2,19:21:50.99:443,51,0	1/1:2,25:27:74.65:633,75,0	1/1:3,15:18:44.89:381,45,0	0/0:20,0:22:59.93:0,60,621	0/0:22,0:22:63.13:0,63,672	0/0:20,0:20:54.10:0,54,572	1/1:5,24:29:65.98:573,66,0	0/0:28,1:29:49.13:0,49,762	0/0:25,0:25:72.19:0,72,796	0/0:17,0:17:51.14:0,51,564	1/1:4,10:14:29.97:258,30,0	1/1:3,20:23:56.92:487,57,0	1/1:3,10:13:20.98:182,21,0	0/0:27,0:27:66.12:0,66,697	0/0:27,0:28:72.01:0,72,769	0/0:12,0:12:33.09:0,33,365	1/1:0,20:20:50.99:443,51,0	1/1:2,29:31:86.95:749,87,0	1/1:2,28:30:74.72:651,75,0	1/1:2,8:10:20.98:182,21,0
chr10	55748526	.	G	GGA	20199.71	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=14.666;DP=767;FS=0.559;HRun=0;HaplotypeScore=113.8868;InbreedingCoeff=0.9955;MQ=85.49;MQ0=0;MQRankSum=-8.553;QD=49.63;ReadPosRankSum=1.619;VQSLOD=5.7063;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,114,1742	1/1:0,9:9:24.08:439,24,0	0/0:30,0:30:90.28:0,90,1345	0/0:30,0:30:84.25:0,84,1228	0/0:20,0:20:60.18:0,60,888	1/1:3,21:24:63.16:1177,63,0	1/1:2,37:40:99:1877,99,0	1/1:3,34:37:99:2008,108,0	1/1:2,18:20:54.18:1004,54,0	1/1:5,27:34:99:1780,99,0	1/1:1,15:16:36.12:695,36,0	0/0:26,0:26:78.26:0,78,1188	0/0:29,0:29:84.27:0,84,1265	0/0:34,0:34:96.33:0,96,1468	1/1:1,32:34:90.31:1738,90,0	0/0:29,0:29:87.30:0,87,1331	0/0:19,0:19:57.15:0,57,826	0/0:22,0:22:66.22:0,66,1002	1/1:3,23:26:78.23:1433,78,0	1/1:0,15:15:42.14:788,42,0	1/1:4,48:52:99:2391,126,0	0/0:19,0:19:57.18:0,57,846	0/0:22,0:22:66.21:0,66,983	0/0:35,0:35:96.26:0,96,1391	1/1:1,25:26:63.22:1215,63,0	1/1:2,28:30:87.30:1651,87,0	1/1:3,35:39:93.32:1772,93,0	1/1:0,4:4:12.04:232,12,0
chr10	55751985	.	A	AAAGCAAAGCAACAT	85596.03	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-5.733;DP=779;FS=0.942;HRun=0;HaplotypeScore=205.8642;InbreedingCoeff=0.9968;MQ=73.29;MQ0=0;MQRankSum=-13.555;QD=124.05;ReadPosRankSum=0.759;VQSLOD=4.5837;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,9:33:48.16:3154,48,0	1/1:6,5:17:26.30:1464,26,0	0/0:18,0:18:45.15:0,45,1472	0/0:31,0:31:75.13:0,75,2161	1/1:9,16:30:69.23:4514,69,0	1/1:3,8:24:33.11:2113,33,0	1/1:11,10:28:60.20:3786,60,0	1/1:27,1:46:99:6645,135,0	1/1:8,11:25:57.20:3515,57,0	1/1:14,12:36:99:6317,108,0	1/1:7,6:20:39.13:2327,39,0	1/1:7,15:33:66.23:4286,66,0	0/0:27,0:27:78.27:0,78,3313	0/0:13,0:13:33.11:0,33,1403	1/1:14,18:49:93.32:5689,93,0	1/1:12,15:36:78.27:5001,78,0	1/1:9,14:36:54.18:3230,54,0	1/1:4,8:21:33.11:2318,33,0	1/1:10,8:25:72.25:3764,72,0	1/1:6,10:22:51.17:2994,51,0	1/1:8,6:21:36.12:2342,36,0	1/1:25,7:32:84.27:4117,84,0	1/1:6,7:22:36.12:1901,36,0	1/1:7,6:23:27.09:1704,27,0	1/1:11,5:28:42.14:2601,42,0	1/1:14,16:37:99:6065,108,0	1/1:11,15:37:75.26:4631,75,0	1/1:5,1:9:18.06:1119,18,0
chr10	55751986	.	A	AAGC	15419.79	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=13.139;DP=611;FS=0.853;HRun=0;HaplotypeScore=320.3719;InbreedingCoeff=0.8773;MQ=79.80;MQ0=0;MQRankSum=-13.144;QD=29.60;ReadPosRankSum=5.008;VQSLOD=4.5014;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:24:48:652,48,0	1/1:15,0:15:8.67:241,9,0	0/0:18,0:18:48.16:0,48,775	0/0:32,0:32:78.16:0,78,1197	1/1:28,1:29:39.50:901,39,0	1/1:14,0:14:28.86:382,29,0	1/1:26,0:26:54.74:744,55,0	1/1:29,0:29:47.88:843,48,0	1/1:19,1:20:55.47:727,55,0	1/1:28,1:29:69.78:905,70,0	1/1:13,0:13:5.66:360,6,0	1/1:24,0:24:63.47:851,63,0	0/0:26,0:26:78.27:0,78,1376	0/0:14,0:14:39.11:0,39,632	1/1:32,0:32:83.31:1052,83,0	1/1:30,0:30:67.17:859,67,0	1/1:24,0:24:26.95:617,27,0	1/1:15,0:15:12.19:439,12,0	1/1:17,0:18:49.50:676,50,0	1/1:16,0:16:44.96:585,45,0	1/1:15,0:15:9.25:504,9,0	1/1:27,7:34:3.26:857,3,0	1/1:16,0:16:11.50:406,11,0	1/1:15,0:15:17.54:252,18,0	1/1:19,0:19:38.74:486,39,0	1/1:31,0:31:46.73:941,47,0	1/1:26,0:26:72.02:921,72,0	1/1:7,0:7:17.95:222,18,0
chr10	55752659	.	C	CTG	7728.10	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=15.687;DP=731;FS=0.000;HRun=0;HaplotypeScore=103.9385;InbreedingCoeff=0.9941;MQ=88.22;MQ0=0;MQRankSum=-2.989;QD=45.19;ReadPosRankSum=3.780;VQSLOD=6.3926;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,148,2392	0/0:12,0:12:33.10:0,33,514	0/0:23,0:23:69.24:0,69,1125	0/0:29,0:29:67.79:0,68,1130	0/0:30,0:30:90.31:0,90,1462	0/0:21,0:21:60.19:0,60,955	0/0:28,0:28:84.29:0,84,1370	0/0:28,0:28:81.27:0,81,1288	0/0:14,0:14:42.14:0,42,680	0/0:33,0:33:99:0,99,1595	0/0:21,0:21:63.22:0,63,1024	1/1:1,26:28:78.27:1511,78,0	0/0:25,0:25:72.25:0,72,1175	0/0:20,0:20:60.20:0,60,979	0/0:44,0:44:99:0,132,2143	1/1:0,35:35:99:1914,99,0	1/1:0,28:28:75.23:1451,75,0	1/1:0,20:22:48.16:934,48,0	0/0:19,0:19:57.19:0,57,922	0/0:29,0:29:84.29:0,84,1369	0/0:55,0:55:99:0,166,2692	1/1:1,22:23:39.13:760,39,0	1/1:0,14:15:11.94:232,12,0	1/1:0,19:20:48.16:927,48,0	0/0:18,0:18:54.18:0,54,881	0/0:30,0:30:84.29:0,84,1371	0/0:22,0:22:63.20:0,63,1000	0/0:10,0:10:30.10:0,30,489
chr10	55753107	.	TTGTGTTTGTGTGTG	T	1979.74	PASS	AB=0.559;AC=13;AF=0.232;AN=56;BaseQRankSum=1.268;DP=601;FS=1.626;HRun=0;HaplotypeScore=202.2950;InbreedingCoeff=0.8643;MQ=53.84;MQ0=26;MQRankSum=-1.811;QD=14.24;ReadPosRankSum=1.700;VQSLOD=2.6460;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:36:78.66:0,79,990	0/0:14,0:14:21.65:0,22,250	0/0:35,0:17:23.74:0,24,189	0/0:26,0:11:2.90:0,3,42	0/0:10,0:10:24.59:0,25,282	0/0:21,0:20:31.98:0,32,714	0/0:31,0:31:71.86:0,72,895	0/0:20,0:19:50.86:0,51,427	0/0:13,0:13:23.74:0,24,506	0/0:16,0:16:44.49:0,44,1158	0/0:10,0:10:17.99:0,18,293	1/1:3,25:27:9.03:348,9,0	0/0:14,0:14:32.99:0,33,588	0/0:28,0:27:62.59:0,63,1581	0/0:23,0:21:39.02:0,39,866	1/1:17,1:20:41.80:714,42,0	1/1:18,0:18:35.37:252,35,0	1/1:17,0:15:38.35:274,38,0	0/0:18,0:17:48:0,48,1223	0/0:14,0:14:3.27:0,3,630	0/0:51,0:49:93.50:0,93,1571	0/1:4,15:19:0.13:11,0,0	1/1:7,0:7:15.62:157,16,0	1/1:29,1:28:45.49:407,45,0	0/0:25,0:23:42.30:0,42,920	0/0:25,0:24:52.44:0,52,1589	0/0:23,0:20:48.56:0,49,1081	0/0:7,0:5:9.03:0,9,533
chr10	55753158	.	T	TGTGC	2864.18	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-5.579;DP=581;FS=6.278;HRun=0;HaplotypeScore=125.2785;InbreedingCoeff=0.9040;MQ=59.07;MQ0=24;MQRankSum=1.948;QD=10.61;ReadPosRankSum=0.745;VQSLOD=2.5984;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:49.10:0,49,413	0/0:13,0:12:29.83:0,30,255	0/0:30,0:15:42.09:0,42,460	0/0:43,0:22:33.63:0,34,504	0/0:10,0:10:26.69:0,27,211	1/1:8,1:19:2.36:65,2,0	1/1:29,0:28:27.74:326,28,0	0/0:17,0:15:37.99:0,38,250	1/1:12,0:12:23.31:166,23,0	1/1:11,0:11:13.55:122,14,0	1/1:12,0:12:23.80:209,24,0	0/0:24,0:23:26.39:0,26,196	0/0:15,0:15:29.74:0,30,280	0/0:23,0:23:61.63:0,62,613	1/1:2,18:22:2.98:24,3,0	0/0:18,0:18:42.93:0,43,409	0/0:20,0:20:50.17:0,50,364	0/0:22,0:19:53.72:0,54,416	1/1:16,0:16:5.35:228,5,0	1/1:18,0:18:19.47:278,19,0	1/1:39,0:40:42.32:500,42,0	0/0:18,0:18:23.91:0,24,194	0/0:9,0:9:19.80:0,20,157	0/0:19,0:19:28.47:0,28,218	1/1:22,1:22:47.83:427,48,0	1/1:11,0:29:21.32:345,21,0	1/1:22,0:20:21.01:241,21,0	1/1:12,0:11:3.77:153,4,0
chr10	55756879	.	TAC	T	84.38	PASS	AB=0.700;AC=9;AF=0.500;AN=18;BaseQRankSum=-1.683;DP=268;FS=8.695;HRun=0;HaplotypeScore=35.9585;MQ=34.42;MQ0=53;MQRankSum=2.370;QD=2.72;ReadPosRankSum=1.923;VQSLOD=-0.6213;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:5:5.70:0,6,28	./.	0/0:89,0:15:17.28:0,17,189	0/0:97,0:15:1.18:0,1,102	./.	./.	./.	0/0:4,0:1:3.01:0,3,34	./.	./.	./.	./.	1/1:3,0:2:3.01:30,3,0	0/1:8,6:12:30.09:62,0,30	./.	./.	1/1:5,0:1:3.01:31,3,0	1/1:4,0:2:3.01:40,3,0	./.	./.	./.	./.	./.	1/1:5,0:2:2.68:11,3,0	./.	./.	./.	./.
chr10	55756980	.	GAGCTAAATCCCCAACCCC	G	92.46	PASS	AB=0.700;AC=1;AF=0.083;AN=12;BaseQRankSum=2.661;DP=53;FS=13.945;HRun=0;HaplotypeScore=77.1544;MQ=58.86;MQ0=11;MQRankSum=-1.973;QD=13.21;ReadPosRankSum=-1.847;VQSLOD=-0.1267;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:3,0:1:3.01:0,3,174	./.	0/0:2,0:1:3.01:0,3,269	0/0:8,0:8:24.08:0,24,1794	./.	./.	./.	./.	./.	./.	./.	./.	0/0:7,0:7:21.07:0,21,1881	0/0:12,0:12:36.12:0,36,3214	./.	./.	./.	./.	0/1:4,3:5:99:159,0,155	./.	./.	./.	./.	./.	./.	./.	./.	./.
chr10	55757149	.	G	GGGGCGGGTAGTGAGTGT	28483.46	PASS	AC=46;AF=0.852;AN=54;BaseQRankSum=-1.063;DP=493;FS=5.165;HRun=0;HaplotypeScore=179.8302;InbreedingCoeff=0.8944;MQ=76.38;MQ0=1;MQRankSum=-11.088;QD=71.75;ReadPosRankSum=0.823;VQSLOD=4.4971;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:11,1:21:15.05:1004,15,0	1/1:2,1:3:6.02:489,6,0	0/0:17,0:17:24.07:0,24,709	0/0:24,0:23:44.74:0,45,1090	1/1:12,5:27:11.57:959,12,0	1/1:7,1:11:15.05:1004,15,0	1/1:15,3:28:21.07:1597,21,0	1/1:27,0:27:42.13:2020,42,0	1/1:5,4:12:18.06:1437,18,0	1/1:9,2:15:20.66:1311,21,0	1/1:5,1:9:9.03:724,9,0	1/1:10,1:20:25.02:1538,25,0	0/0:21,0:21:54.16:0,54,2086	0/0:32,0:32:84.22:0,84,3483	1/1:9,6:22:33.11:2314,33,0	1/1:6,3:17:21.07:1228,21,0	1/1:7,1:20:18.06:1084,18,0	1/1:7,4:15:18.06:1124,18,0	1/1:7,1:13:24.08:1149,24,0	1/1:5,2:13:12.04:977,12,0	1/1:14,2:27:18.06:1039,18,0	1/1:12,5:26:24.08:1949,24,0	1/1:9,2:17:12.04:776,12,0	1/1:10,2:19:15.05:1222,15,0	1/1:4,2:7:12.04:841,12,0	1/1:8,3:17:33.08:1589,33,0	1/1:5,2:10:15.05:1110,15,0	./.
chr10	55758204	.	AACACACACACACAC	A	3454.91	PASS	AB=0.829;AC=25;AF=0.463;AN=54;BaseQRankSum=3.889;DP=545;FS=0.000;HRun=0;HaplotypeScore=202.7829;InbreedingCoeff=0.6477;MQ=69.13;MQ0=8;MQRankSum=-4.151;QD=14.52;ReadPosRankSum=1.838;VQSLOD=2.1979;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:4.32:0,4,24	1/1:3,1:4:5.61:127,6,0	./.	0/0:33,0:25:3.01:0,3,40	0/0:15,0:15:0:0,0,1	1/1:19,1:22:11.77:366,12,0	1/1:8,3:11:5.98:97,6,0	0/0:18,0:18:24.08:0,24,859	1/1:13,4:17:5.85:131,6,0	1/1:10,2:15:12.51:423,13,0	0/1:8,3:11:2.06:15,0,2	0/0:15,0:23:15.99:0,16,746	0/0:16,0:15:18.04:0,18,566	0/0:16,0:16:24.08:0,24,1085	1/1:12,10:23:15.99:531,16,0	0/0:21,0:29:12.51:0,13,557	0/0:20,0:20:13.56:0,14,314	0/0:19,0:18:24.49:0,24,1033	0/1:18,2:19:3.52:130,0,4	1/1:9,2:13:20.97:375,21,0	1/1:37,0:36:6.73:99,7,0	0/0:9,0:9:11.60:0,12,582	0/0:17,0:17:12.04:0,12,677	0/0:42,0:42:69.24:0,69,3584	1/1:4,4:9:12.04:406,12,0	0/1:17,6:21:18.93:222,0,19	1/1:17,7:26:13.50:429,14,0	1/1:6,0:7:6:106,6,0
chr10	55759761	.	G	GTT	10257.02	PASS	AB=0.927;AC=45;AF=0.804;AN=56;BaseQRankSum=2.015;DP=622;FS=4.027;HRun=5;HaplotypeScore=149.9351;InbreedingCoeff=0.6926;MQ=59.33;MQ0=4;MQRankSum=-4.357;QD=19.73;ReadPosRankSum=1.475;VQSLOD=1.9042;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:25:2.04:60,0,2	1/1:10,1:11:24.03:279,24,0	0/0:38,0:24:57:0,57,733	0/0:28,0:16:30.60:0,31,339	0/1:24,0:22:23.72:24,0,64	1/1:22,0:23:40.91:507,41,0	1/1:23,1:22:42.31:481,42,0	0/1:12,0:25:20.54:143,0,21	1/1:5,11:15:18.06:252,18,0	1/1:31,1:31:68.71:849,69,0	1/1:16,0:16:33.10:403,33,0	1/1:19,0:18:25.19:321,25,0	0/0:19,0:19:48.14:0,48,621	0/0:16,0:16:42.13:0,42,552	1/1:13,3:17:30.58:351,31,0	1/1:25,0:23:50.86:551,51,0	1/1:29,1:30:69.41:723,69,0	1/1:18,0:17:39.73:400,40,0	1/1:26,0:26:66.85:776,67,0	1/1:22,2:24:36.01:502,36,0	1/1:9,1:10:21.74:176,22,0	1/1:19,0:17:43.49:372,43,0	1/1:20,1:20:41.51:421,42,0	1/1:26,0:26:61.18:646,61,0	1/1:22,1:23:24.24:296,24,0	1/1:27,2:29:61.31:736,61,0	1/1:23,5:29:65.41:779,65,0	1/1:7,0:7:18.02:209,18,0
chr10	55759763	.	TTTG	T	5268.99	PASS	AB=1.000;AC=28;AF=0.500;AN=56;BaseQRankSum=-9.041;DP=630;FS=9.417;HRun=0;HaplotypeScore=165.4101;InbreedingCoeff=0.2228;MQ=56.97;MQ0=5;MQRankSum=-1.915;QD=12.49;ReadPosRankSum=-3.422;VQSLOD=3.4048;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:28:8.84:144,0,9	0/1:13,0:13:4.34:4,0,30	0/0:38,0:22:57.92:0,58,1075	0/0:29,0:16:33.99:0,34,512	0/1:24,0:22:51.88:168,0,52	0/1:24,0:24:18.66:19,0,55	0/1:25,0:23:15.19:15,0,61	1/1:25,0:25:37.23:332,37,0	0/0:17,0:16:17.17:0,17,79	0/0:32,0:30:9.67:0,10,139	0/0:15,0:15:1.24:0,1,56	1/1:14,5:18:14.01:422,14,0	0/0:19,0:19:48.16:0,48,1068	0/0:15,0:15:42.14:0,42,931	0/0:17,0:17:1.28:0,1,109	1/1:22,3:23:51.05:665,51,0	1/1:27,3:30:69.95:866,70,0	1/1:16,3:18:11.23:468,11,0	0/1:28,0:28:62.95:138,0,63	0/0:26,0:26:3.43:0,3,107	0/1:10,0:10:20.08:20,0,25	1/1:19,0:17:41.57:436,42,0	1/1:18,2:19:47.15:561,47,0	1/1:24,2:26:60.12:798,60,0	0/1:23,0:23:14.75:15,0,53	0/1:28,0:28:42.52:43,0,127	0/1:28,0:28:11.56:12,0,151	1/1:8,0:8:17.95:143,18,0
chr10	55759765	.	TG	T	8102.80	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=5.313;DP=620;FS=4.527;HRun=1;HaplotypeScore=138.0428;InbreedingCoeff=0.9932;MQ=57.55;MQ0=5;MQRankSum=-5.582;QD=15.64;ReadPosRankSum=0.418;VQSLOD=4.9204;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:20,7:27:58.91:488,59,0	1/1:12,0:12:21.28:117,21,0	0/0:39,0:23:49.91:0,50,744	0/0:30,0:17:32.44:0,32,305	1/1:19,5:22:47.24:402,47,0	1/1:24,0:24:46.06:282,46,0	1/1:25,0:23:40.41:243,40,0	1/1:21,1:22:60.40:380,60,0	1/1:16,0:15:19.02:92,19,0	1/1:31,0:29:70.36:404,70,0	1/1:14,0:14:27.59:136,28,0	1/1:7,12:18:29.35:330,29,0	0/0:18,0:18:48.16:0,48,697	0/0:15,0:15:42.14:0,42,607	1/1:17,0:17:30.73:181,31,0	1/1:4,20:22:48.64:553,49,0	1/1:12,17:29:61.98:682,62,0	1/1:7,10:16:37.21:428,37,0	1/1:29,0:29:73.03:453,73,0	1/1:26,0:26:40.85:209,41,0	1/1:10,0:10:22.41:128,22,0	1/1:5,14:17:34.58:434,35,0	1/1:8,12:19:47.10:469,47,0	1/1:13,13:26:59.05:628,59,0	1/1:22,0:22:31.66:168,32,0	1/1:27,1:28:70.70:444,71,0	1/1:29,0:29:59.61:308,60,0	1/1:8,0:8:17.97:146,18,0
chr10	55759770	.	TG	T	7567.80	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=7.489;DP=610;FS=4.524;HRun=1;HaplotypeScore=135.9784;InbreedingCoeff=0.9133;MQ=55.69;MQ0=5;MQRankSum=-5.072;QD=14.84;ReadPosRankSum=2.513;VQSLOD=4.9651;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:27,1:27:65.02:527,65,0	1/1:13,0:13:22.22:140,22,0	0/0:36,1:20:1.75:0,2,396	0/0:29,0:16:16.29:0,16,257	1/1:23,2:23:57.35:442,57,0	1/1:21,0:21:40.07:247,40,0	1/1:24,0:22:35.41:220,35,0	1/1:22,0:22:47.92:232,48,0	1/1:16,0:15:18.84:85,19,0	1/1:29,0:27:54.35:327,54,0	1/1:14,0:14:29.02:151,29,0	1/1:21,0:20:34.13:339,34,0	0/0:19,0:19:51.13:0,51,594	0/0:15,0:15:44.89:0,45,474	1/1:16,0:16:18.83:118,19,0	1/1:23,0:21:47.20:555,47,0	1/1:28,1:29:68.66:702,69,0	1/1:18,0:17:42.89:453,43,0	1/1:26,0:27:37.09:358,37,0	1/1:25,0:25:35.49:205,35,0	1/1:10,0:10:12.33:78,12,0	1/1:20,0:18:43.93:469,44,0	1/1:19,1:19:44.31:438,44,0	1/1:23,0:23:49.64:571,50,0	1/1:19,0:19:22.60:147,23,0	1/1:25,0:25:13.45:298,13,0	1/1:34,0:34:42.47:322,42,0	1/1:8,0:8:17.96:144,18,0
chr10	55759771	.	GT	G	2673.65	PASS	AB=0.970;AC=37;AF=0.685;AN=54;BaseQRankSum=6.685;DP=612;FS=4.008;HRun=11;HaplotypeScore=151.6379;InbreedingCoeff=0.0047;MQ=55.68;MQ0=5;MQRankSum=0.373;QD=5.02;ReadPosRankSum=4.698;VQSLOD=0.7513;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:27:48.04:48,0,60	1/1:12,2:14:7.05:75,7,0	0/0:36,0:20:6.44:0,6,238	0/1:28,0:16:4.34:4,0,80	0/1:25,0:23:26.64:27,0,68	1/1:20,1:21:37.31:197,37,0	1/1:23,1:22:11.97:165,12,0	1/1:18,4:22:23.25:132,23,0	1/1:16,0:15:14.75:47,15,0	1/1:25,4:27:14.37:284,14,0	0/1:12,2:14:10.58:76,0,11	0/1:22,0:22:41.21:60,0,41	0/0:20,0:20:48.02:0,48,496	0/0:13,0:15:38.80:0,39,378	1/1:14,2:16:16.04:120,16,0	1/1:23,0:21:15.29:162,15,0	0/1:29,0:29:14.83:162,0,15	0/1:18,0:17:23.15:94,0,23	0/1:26,0:26:20.12:143,0,20	1/1:21,3:24:22.48:151,22,0	1/1:9,1:10:0.73:86,1,0	0/1:20,0:18:47.40:117,0,47	1/1:21,0:20:6.15:106,6,0	1/1:22,0:22:36.62:170,37,0	0/1:16,3:19:17.02:112,0,17	0/1:23,1:24:13.17:134,0,13	1/1:32,4:36:4.34:169,4,0	./.
chr10	55759772	.	T	TG	4956.55	PASS	AB=0.645;AC=25;AF=0.446;AN=56;BaseQRankSum=-6.197;DP=613;FS=3.606;HRun=1;HaplotypeScore=146.2057;InbreedingCoeff=0.7484;MQ=54.78;MQ0=5;MQRankSum=-1.675;QD=17.70;ReadPosRankSum=1.779;VQSLOD=5.2823;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:59.42:0,59,457	1/1:4,7:14:20.50:204,20,0	0/0:36,0:19:39.06:0,39,478	0/0:29,0:16:27.01:0,27,235	0/0:25,0:23:53.84:0,54,423	1/1:3,17:21:31.87:462,32,0	1/1:9,14:21:9.93:385,10,0	0/0:22,0:22:20.49:0,20,99	1/1:15,2:16:9.17:198,9,0	1/1:7,21:27:48.87:629,49,0	1/1:2,12:14:33.74:337,34,0	0/0:23,0:22:13.96:0,14,224	0/0:20,0:20:51.15:0,51,683	0/0:16,0:16:35.32:0,35,502	1/1:9,7:16:22.16:312,22,0	0/0:23,0:21:44.61:0,45,290	0/0:29,0:29:66.99:0,67,533	0/0:18,0:17:47.51:0,48,344	0/1:16,10:26:7.39:415,0,7	1/1:6,17:24:27.52:451,28,0	1/1:5,5:10:9.88:131,10,0	0/0:20,0:18:45.23:0,45,339	0/0:21,0:20:42.18:0,42,297	0/0:22,0:22:43.22:0,43,331	0/1:7,12:19:14.84:240,0,15	0/1:8,15:24:28.08:512,0,28	1/1:14,22:36:6.51:619,7,0	1/1:7,0:7:8.89:63,9,0
chr10	55761464	.	A	AGAG	35558.64	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-9.519;DP=667;FS=2.229;HRun=0;HaplotypeScore=88.3224;InbreedingCoeff=0.9833;MQ=78.61;MQ0=0;MQRankSum=-8.838;QD=60.07;ReadPosRankSum=2.492;VQSLOD=6.5398;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,31:35:90.31:2060,90,0	1/1:0,10:10:24.08:523,24,0	0/0:16,0:16:45.14:0,45,716	0/0:20,0:20:59.94:0,60,873	1/1:3,17:21:54.07:1183,54,0	1/1:2,24:25:69.24:1561,69,0	1/1:2,25:27:78.27:1772,78,0	1/1:4,19:23:69.21:1471,69,0	1/1:4,20:25:66.23:1485,66,0	1/1:2,21:25:72.19:1514,72,0	1/1:5,12:18:42.14:876,42,0	1/1:1,40:42:99:2766,120,0	0/0:15,0:15:36.12:0,36,614	0/0:24,0:24:72.23:0,72,1190	1/1:4,36:41:99:2488,111,0	1/1:4,24:28:69.24:1534,69,0	1/1:1,33:34:93.32:2143,93,0	1/1:1,20:21:51.18:1170,51,0	1/1:10,10:21:60.18:1250,60,0	1/1:3,15:18:51.17:1133,51,0	1/1:2,20:22:60.21:1367,60,0	1/1:3,21:24:66.23:1453,66,0	1/1:2,11:14:36.12:801,36,0	1/1:2,26:28:66.23:1521,66,0	1/1:1,19:21:54.19:1245,54,0	1/1:2,22:24:69.20:1488,69,0	1/1:4,33:37:99:2547,111,0	1/1:0,5:7:9.03:208,9,0
chr10	55763431	.	G	GA	2693.03	PASS	AB=0.935;AC=15;AF=0.268;AN=56;BaseQRankSum=-8.202;DP=471;FS=17.004;HRun=7;HaplotypeScore=54.3417;InbreedingCoeff=0.8785;MQ=74.79;MQ0=0;MQRankSum=1.175;QD=20.56;ReadPosRankSum=1.010;VQSLOD=2.0771;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:57.08:0,57,550	0/0:4,0:4:9.01:0,9,86	0/0:29,0:25:6.36:0,6,325	0/1:25,1:18:17.28:17,0,126	0/0:16,0:16:33.04:0,33,315	0/0:19,0:19:57.09:0,57,550	0/0:13,0:13:36.06:0,36,348	0/0:20,0:20:48.06:0,48,460	0/0:18,0:18:48.06:0,48,458	0/0:15,0:15:42.05:0,42,399	0/0:19,0:19:54.08:0,54,521	1/1:3,13:16:42.13:506,42,0	0/0:11,0:11:30.04:0,30,289	0/0:11,0:11:30.05:0,30,290	0/0:15,0:15:39.04:0,39,371	1/1:0,19:19:51.16:616,51,0	1/1:1,20:21:48.15:580,48,0	1/1:3,13:17:35.98:413,36,0	0/0:16,0:16:36:0,36,333	0/0:18,0:18:45:0,45,419	0/0:11,0:11:30.05:0,30,290	1/1:0,5:5:15.05:181,15,0	1/1:2,8:10:15.05:179,15,0	1/1:1,13:14:33.10:398,33,0	0/0:20,0:20:57.09:0,57,550	0/0:18,0:18:48.07:0,48,459	0/0:28,0:28:81.08:0,81,765	0/0:13,0:13:36.06:0,36,347
chr10	55763944	.	CTGTTTTT	C	11930.10	PASS	AB=0.950;AC=29;AF=0.518;AN=56;BaseQRankSum=-1.247;DP=624;FS=2.583;HRun=0;HaplotypeScore=193.0896;InbreedingCoeff=0.8942;MQ=61.29;MQ0=4;MQRankSum=-8.391;QD=38.48;ReadPosRankSum=2.285;VQSLOD=4.6918;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:84.27:0,84,2810	1/1:9,6:15:30.10:550,30,0	0/0:13,0:7:2.50:0,2,9	0/0:25,0:16:17.61:0,18,274	0/0:32,0:32:66.20:0,66,1996	1/1:6,13:19:51.17:1128,51,0	1/1:13,6:19:33.11:640,33,0	0/0:34,0:34:68.76:0,69,1370	1/1:12,7:19:36.12:679,36,0	1/1:13,11:24:57.19:1132,57,0	1/1:5,8:13:35.71:587,36,0	0/0:25,0:21:45.11:0,45,892	0/0:24,0:24:41.87:0,42,1381	0/0:16,0:16:33.11:0,33,1086	1/1:19,9:28:57.18:1000,57,0	0/1:18,1:18:62.49:62,0,820	0/0:24,0:24:33.10:0,33,627	0/0:21,0:20:12.53:0,13,719	1/1:19,4:23:24.87:570,25,0	1/1:12,19:31:87.27:1657,87,0	1/1:18,2:20:24.07:381,24,0	0/0:26,0:26:57.07:0,57,1207	0/0:26,0:26:53.92:0,54,1168	0/0:11,0:11:11.98:0,12,190	1/1:12,10:22:54.18:1052,54,0	1/1:15,5:20:38.96:656,39,0	1/1:14,14:28:63.18:1255,63,0	1/1:3,7:9:27.08:579,27,0
chr10	55763953	.	G	GT	4402.46	PASS	AB=0.895;AC=25;AF=0.446;AN=56;BaseQRankSum=5.336;DP=613;FS=3.419;HRun=6;HaplotypeScore=163.0148;InbreedingCoeff=0.7627;MQ=54.38;MQ0=6;MQRankSum=-8.943;QD=15.45;ReadPosRankSum=1.303;VQSLOD=3.2263;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:93.19:0,93,948	1/1:11,4:15:29.71:254,30,0	0/0:13,0:4:5.91:0,6,47	0/0:23,0:11:20.92:0,21,153	0/0:27,0:27:72.16:0,72,733	1/1:17,2:19:48.70:309,49,0	1/1:9,4:13:30.62:243,31,0	0/0:36,0:36:90.78:0,91,702	1/1:16,3:19:36.31:286,36,0	1/1:21,5:26:33.18:393,33,0	0/1:15,3:18:47.76:247,0,48	0/0:21,0:18:42.72:0,43,364	0/0:22,0:22:48.10:0,48,489	0/0:17,0:17:39.09:0,39,397	1/1:21,6:27:5.89:439,6,0	0/0:23,1:22:5.87:0,6,353	0/0:26,0:22:28.16:0,28,289	0/0:20,0:19:12.09:0,12,268	0/1:16,3:19:0.99:293,0,1	1/1:34,2:36:50.87:575,51,0	1/1:12,4:16:25.68:249,26,0	0/0:22,0:22:56.60:0,57,458	0/0:24,0:24:55.92:0,56,414	0/0:10,0:10:14.92:0,15,114	1/1:19,3:22:47.10:391,47,0	1/1:13,4:16:21.23:321,21,0	0/1:25,1:27:23.37:280,0,23	1/1:11,0:10:16.50:123,17,0
chr10	55763961	.	T	TTTTTTG	4981.18	PASS	AB=0.976;AC=14;AF=0.250;AN=56;BaseQRankSum=-1.618;DP=624;FS=11.740;HRun=0;HaplotypeScore=225.7017;InbreedingCoeff=0.7852;MQ=53.79;MQ0=6;MQRankSum=-5.769;QD=29.65;ReadPosRankSum=3.032;VQSLOD=3.4650;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,114,1958	0/0:15,0:15:36.47:0,36,308	0/0:23,0:8:10.16:0,10,85	0/1:24,0:11:5.87:6,0,102	0/0:31,0:31:77.97:0,78,1383	0/0:21,0:21:51.60:0,52,663	0/0:14,0:14:36.24:0,36,456	0/0:34,0:34:84.89:0,85,645	0/0:19,0:19:27.25:0,27,366	0/0:29,0:29:47.71:0,48,639	0/0:18,0:18:37.45:0,37,337	1/1:21,2:19:42.59:736,43,0	0/0:16,0:16:45.15:0,45,876	0/0:15,0:15:39.13:0,39,717	0/0:25,0:24:47.17:0,47,469	1/1:22,0:20:3.13:718,3,0	1/1:23,1:20:36.12:663,36,0	0/1:19,1:19:14.16:628,0,14	0/0:17,0:17:24.01:0,24,242	0/0:37,0:37:59.23:0,59,867	0/0:13,0:13:18.82:0,19,124	1/1:21,1:22:51.14:895,51,0	1/1:19,4:23:46.96:958,47,0	1/1:10,0:10:18.06:376,18,0	0/0:26,0:26:57.48:0,57,627	0/0:21,0:20:37.98:0,38,361	0/0:30,0:30:81.33:0,81,928	0/0:10,0:9:24.53:0,25,339
chr10	55763966	.	TTG	T	2458.76	PASS	AB=0.989;AC=38;AF=0.679;AN=56;BaseQRankSum=14.000;DP=624;FS=19.522;HRun=0;HaplotypeScore=176.4915;InbreedingCoeff=0.2043;MQ=53.51;MQ0=7;MQRankSum=-9.253;QD=4.77;ReadPosRankSum=2.638;VQSLOD=1.6462;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,119,1595	0/1:15,0:15:7.05:98,0,7	0/1:25,0:9:6.12:6,0,90	0/1:23,0:9:1.60:2,0,89	0/0:31,0:31:83.54:0,84,1139	1/1:22,2:23:28.65:238,29,0	1/1:15,1:16:2.64:96,3,0	1/1:34,0:34:56.52:206,57,0	1/1:20,0:20:2.56:99,3,0	0/1:25,2:27:28.97:159,0,29	0/1:19,0:19:18.08:90,0,18	1/1:23,0:19:11.75:57,12,0	0/0:18,0:18:50.76:0,51,665	0/0:18,0:18:44.17:0,44,595	1/1:24,0:23:10.24:185,10,0	1/1:23,0:21:37.47:156,37,0	1/1:22,0:19:14.44:53,14,0	1/1:18,0:17:20.26:81,20,0	0/1:15,0:15:1.63:74,0,2	1/1:36,1:37:13.16:319,13,0	1/1:11,0:11:0.86:66,1,0	1/1:21,0:21:24.86:110,25,0	0/1:22,0:22:7.94:52,0,8	1/1:10,0:10:11.33:50,11,0	0/1:23,1:24:9.55:139,0,10	0/1:20,0:19:51.04:89,0,51	0/1:31,0:31:58.71:115,0,59	1/1:10,0:9:17.75:94,18,0
chr10	55763967	.	TG	T	4026.04	PASS	AB=0.961;AC=45;AF=0.804;AN=56;BaseQRankSum=13.371;DP=604;FS=0.397;HRun=1;HaplotypeScore=158.7428;InbreedingCoeff=0.6914;MQ=54.08;MQ0=7;MQRankSum=-10.254;QD=8.13;ReadPosRankSum=1.289;VQSLOD=0.8969;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,108,1199	1/1:14,0:14:29.87:141,30,0	0/1:24,1:9:6.22:6,0,73	0/1:20,2:9:16.19:16,0,64	0/0:30,0:30:75:0,75,859	1/1:25,0:24:48.51:228,49,0	1/1:15,0:15:23.75:108,24,0	1/1:32,0:32:79.80:444,80,0	1/1:16,1:17:31.10:146,31,0	1/1:26,0:26:17:170,17,0	1/1:16,0:16:16.02:109,16,0	1/1:24,0:20:39.18:183,39,0	0/0:18,0:18:50.81:0,51,521	0/0:18,0:18:43.85:0,44,463	1/1:21,0:20:46.84:239,47,0	1/1:22,0:20:48.51:274,49,0	1/1:23,0:19:31.78:157,32,0	1/1:17,0:16:30.81:173,31,0	1/1:15,0:15:20.90:100,21,0	1/1:36,0:36:69.39:387,69,0	1/1:10,0:10:15.96:92,16,0	1/1:20,0:20:50.70:273,51,0	1/1:22,0:22:41.16:203,41,0	1/1:10,0:10:14.39:76,14,0	1/1:22,1:23:32.23:174,32,0	0/1:17,0:17:7.38:94,0,7	1/1:31,0:31:23.04:156,23,0	1/1:10,0:9:19.85:79,20,0
chr10	55763968	.	GT	G	5027.25	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=3.504;DP=595;FS=6.588;HRun=10;HaplotypeScore=152.0121;InbreedingCoeff=0.8969;MQ=53.99;MQ0=7;MQRankSum=-6.313;QD=16.48;ReadPosRankSum=-2.021;VQSLOD=3.2947;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:84.54:0,85,1116	1/1:2,12:14:31.17:255,31,0	0/0:25,0:9:8.61:0,9,70	0/0:22,0:9:8.62:0,9,72	0/0:27,1:28:58.79:0,59,837	1/1:4,21:24:53.93:459,54,0	1/1:2,13:15:26.97:233,27,0	1/1:32,0:32:58.19:360,58,0	1/1:2,14:16:35.95:303,36,0	1/1:6,20:26:57.04:507,57,0	1/1:2,14:16:30.01:259,30,0	0/0:22,0:18:25.16:0,25,112	0/0:16,0:18:44.95:0,45,478	0/0:18,0:18:18.99:0,19,412	1/1:5,15:19:44.88:372,45,0	0/0:21,1:20:0.75:0,1,108	0/0:23,0:19:24.35:0,24,104	0/0:17,0:16:20.65:0,21,92	1/1:5,10:15:23.97:204,24,0	1/1:7,30:37:31.78:589,32,0	1/1:3,7:10:9.24:81,9,0	0/0:21,0:21:30.55:0,31,156	0/0:21,0:21:32.13:0,32,155	0/0:10,0:10:5.61:0,6,24	1/1:6,16:22:20.76:361,21,0	1/1:5,12:16:2.73:251,3,0	1/1:3,27:30:18.68:585,19,0	1/1:2,8:9:24:207,24,0
chr10	55763972	.	T	TTTG	3939.11	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=0.949;DP=599;FS=11.685;HRun=0;HaplotypeScore=176.9991;InbreedingCoeff=0.9494;MQ=51.85;MQ0=7;MQRankSum=-4.544;QD=28.34;ReadPosRankSum=1.018;VQSLOD=3.4627;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,114,1741	0/0:14,0:14:36.11:0,36,303	0/0:23,0:8:14.70:0,15,164	0/0:22,0:8:0.59:0,1,119	0/0:29,0:29:69.30:0,69,1312	0/0:23,0:22:53.82:0,54,503	0/0:15,0:15:34.55:0,35,310	0/0:32,0:32:78.01:0,78,875	0/0:17,0:17:38.77:0,39,360	0/0:24,0:24:69.06:0,69,670	0/0:18,0:18:40.93:0,41,341	1/1:16,6:18:35.88:513,36,0	0/0:18,0:18:44.94:0,45,704	0/0:16,0:16:44.80:0,45,658	0/0:21,0:20:54.77:0,55,435	1/1:13,10:21:24.67:750,25,0	1/1:17,6:19:34.82:411,35,0	1/1:11,5:15:37.95:448,38,0	0/0:16,0:16:35.94:0,36,350	0/0:36,0:36:95.09:0,95,859	0/0:13,0:13:25.96:0,26,200	1/1:10,13:23:54.07:857,54,0	1/1:9,12:21:50.26:756,50,0	1/1:6,5:11:14.76:203,15,0	0/0:22,0:22:49.64:0,50,489	0/0:19,0:18:38.67:0,39,368	0/0:31,0:31:86.51:0,87,857	0/0:9,0:8:24.04:0,24,233
chr10	55763973	.	T	TTG	1680.46	PASS	AB=1.000;AC=12;AF=0.214;AN=56;BaseQRankSum=3.506;DP=594;FS=12.440;HRun=0;HaplotypeScore=171.7702;InbreedingCoeff=0.7783;MQ=51.73;MQ0=7;MQRankSum=-6.975;QD=12.18;ReadPosRankSum=1.430;VQSLOD=3.0124;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,117,1607	0/0:14,0:14:36:0,36,252	0/0:23,0:8:14.78:0,15,153	0/0:23,0:8:8.40:0,8,123	0/0:30,0:30:87.22:0,87,1228	0/0:23,0:22:56.57:0,57,435	0/0:15,0:15:34.42:0,34,260	0/0:31,0:31:81.12:0,81,813	0/0:16,0:16:38.45:0,38,298	0/0:23,0:23:68.78:0,69,557	0/0:18,0:18:44.12:0,44,329	1/1:22,0:18:33.46:227,33,0	0/0:17,0:17:47.74:0,48,662	0/0:16,0:16:44.33:0,44,593	0/0:21,0:20:54.84:0,55,373	0/1:23,0:21:21.43:222,0,21	1/1:18,4:18:38.56:363,39,0	1/1:12,4:15:22.61:369,23,0	0/0:17,0:17:35.89:0,36,294	0/0:36,0:36:97.79:0,98,753	0/0:13,0:13:26.01:0,26,178	1/1:23,0:23:40.67:326,41,0	1/1:21,0:21:3.14:259,3,0	0/1:11,0:11:2.23:87,0,2	0/0:22,0:22:55.42:0,55,454	0/0:18,0:17:41.72:0,42,336	0/0:31,0:31:86.32:0,86,714	0/0:9,0:8:23.92:0,24,188
chr10	55763975	.	TTTTG	T	506	PASS	AB=0.818;AC=7;AF=0.125;AN=56;BaseQRankSum=0.085;DP=586;FS=12.502;HRun=0;HaplotypeScore=186.3613;InbreedingCoeff=0.0943;MQ=51.93;MQ0=7;MQRankSum=-3.631;QD=4.52;ReadPosRankSum=-1.499;VQSLOD=1.7575;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,108,2404	0/0:12,0:12:28.88:0,29,253	0/0:25,0:9:17.96:0,18,217	0/0:25,0:8:6.54:0,7,180	0/0:30,0:30:89.08:0,89,1874	0/0:23,0:22:47.51:0,48,286	0/0:15,0:15:33.12:0,33,258	0/0:30,0:30:66.15:0,66,917	0/0:17,0:17:35.35:0,35,299	0/0:24,0:24:60.12:0,60,590	0/0:20,0:20:42.64:0,43,367	0/1:13,8:17:17.91:18,0,199	0/0:19,0:19:53.81:0,54,1109	0/0:17,0:17:45.12:0,45,952	0/0:18,0:17:42.46:0,42,335	0/1:15,7:20:99:197,0,158	0/0:18,0:14:6.17:0,6,183	0/1:16,0:15:65.08:65,0,166	0/0:15,0:15:35.31:0,35,314	0/0:35,0:35:81.16:0,81,683	0/0:13,0:13:17.25:0,17,211	0/1:15,8:23:99:202,0,139	0/1:16,3:19:96.51:97,0,250	1/1:10,1:11:4.80:55,5,0	0/0:20,0:20:48.77:0,49,366	0/0:17,0:16:42.61:0,43,407	0/0:32,0:32:73.92:0,74,710	0/0:9,0:8:22.33:0,22,117
chr10	55763979	.	G	GTTTTTTT	4511.43	PASS	AB=1.000;AC=14;AF=0.250;AN=56;BaseQRankSum=5.668;DP=597;FS=15.707;HRun=10;HaplotypeScore=226.6192;InbreedingCoeff=0.8042;MQ=51.18;MQ0=6;MQRankSum=-6.985;QD=30.08;ReadPosRankSum=-1.410;VQSLOD=0.1022;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,99,2069	0/0:12,0:12:30.57:0,31,521	0/0:24,0:9:8.39:0,8,98	0/1:21,0:7:9.54:10,0,122	0/0:32,0:32:77:0,77,1582	0/0:24,0:23:57.63:0,58,1066	0/0:16,0:16:36.03:0,36,633	0/0:27,0:27:72.17:0,72,1256	0/0:19,0:19:41.93:0,42,626	0/0:24,0:24:70.46:0,70,1266	0/0:19,0:19:45:0,45,696	1/1:17,2:15:22.79:644,23,0	0/0:19,0:19:45:0,45,862	0/0:18,0:18:36.47:0,36,842	0/0:20,0:19:48.65:0,49,713	0/1:23,0:21:17.64:586,0,18	1/1:17,0:14:16.24:330,16,0	1/1:15,0:15:29.68:467,30,0	0/0:19,0:19:42.01:0,42,603	0/0:38,0:38:99:0,99,1631	0/0:15,0:15:24.04:0,24,367	1/1:22,0:23:57.02:967,57,0	1/1:16,4:20:45.15:1219,45,0	1/1:10,0:10:20.49:289,20,0	0/0:22,0:22:54.12:0,54,943	0/0:19,0:18:50.77:0,51,748	0/0:34,0:34:96.21:0,96,1648	0/0:9,0:8:24.08:0,24,520
chr10	55764270	.	TG	T	1119.55	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.198;DP=715;FS=0.652;HRun=3;HaplotypeScore=81.2170;InbreedingCoeff=0.9953;MQ=86.70;MQ0=0;MQRankSum=0.027;QD=32.93;ReadPosRankSum=-4.676;VQSLOD=1.8223;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,138,1981	0/0:10,0:10:30.10:0,30,426	0/0:21,0:21:63.13:0,63,814	0/0:27,0:27:76.76:0,77,957	0/0:34,0:34:99:0,102,1426	0/0:27,0:26:78.22:0,78,1064	0/0:32,0:32:81.27:0,81,1163	1/1:1,33:34:99:1214,99,0	0/0:22,0:22:66.22:0,66,947	0/0:25,0:25:66.22:0,66,943	0/0:18,0:18:42.14:0,42,602	0/0:35,0:35:96.32:0,96,1379	0/0:20,0:20:57.19:0,57,821	0/0:25,0:25:72.24:0,72,1025	0/0:42,0:42:99:0,126,1810	0/0:36,0:36:99:0,99,1413	0/0:21,0:21:63.21:0,63,904	0/0:16,0:16:48.16:0,48,691	0/0:25,0:24:63.18:0,63,880	0/0:28,0:28:78.25:0,78,1105	0/0:36,0:36:99:0,105,1482	0/0:15,0:15:36.12:0,36,518	0/0:18,0:18:51.17:0,51,728	0/0:24,0:24:72.20:0,72,1010	0/0:17,0:17:51.17:0,51,734	0/0:23,0:23:69.22:0,69,977	0/0:29,0:29:87.29:0,87,1243	0/0:7,0:7:21.07:0,21,301
chr10	55764679	.	TTAA	T	835.44	PASS	AB=1.000;AC=35;AF=0.875;AN=40;BaseQRankSum=4.015;DP=212;FS=0.000;HRun=0;HaplotypeScore=49.7414;InbreedingCoeff=0.1517;MQ=66.90;MQ0=0;MQRankSum=1.355;QD=5.57;ReadPosRankSum=1.621;VQSLOD=1.4212;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:11:2.98:21,3,0	1/1:1,0:1:2.68:11,3,0	./.	./.	./.	0/1:8,0:8:14.95:44,0,15	1/1:8,0:7:5.74:35,6,0	0/0:28,0:28:16.93:0,17,146	1/1:4,0:4:5.96:44,6,0	1/1:9,0:9:8.92:63,9,0	1/1:6,0:6:5.96:44,6,0	1/1:7,0:7:2.98:22,3,0	1/1:2,5:7:9.03:119,9,0	./.	0/1:8,0:8:36.73:51,0,37	./.	1/1:28,0:28:8.93:63,9,0	./.	1/1:13,0:13:11.93:91,12,0	1/1:5,0:5:2.98:21,3,0	1/1:4,0:4:5.95:42,6,0	./.	./.	0/1:3,0:3:0:0,0,0	1/1:6,0:6:2.98:21,3,0	1/1:5,0:5:2.97:20,3,0	1/1:6,0:6:11.95:93,12,0	1/1:11,0:11:17.93:140,18,0
chr10	55764718	.	ATAATAT	A	2827.10	PASS	AB=1.000;AC=43;AF=0.796;AN=54;BaseQRankSum=-0.847;DP=228;FS=5.923;HRun=0;HaplotypeScore=49.9073;InbreedingCoeff=0.4056;MQ=65.95;MQ0=1;MQRankSum=0.623;QD=13.21;ReadPosRankSum=3.499;VQSLOD=0.7773;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:14:3.01:52,3,0	1/1:2,0:2:6:78,6,0	0/0:3,0:2:6:0,6,53	0/0:2,0:2:5.92:0,6,39	1/1:7,0:7:17.69:112,18,0	0/1:6,0:6:27.82:45,0,28	1/1:1,6:6:6.02:131,6,0	0/1:35,0:35:99:629,0,151	1/1:6,1:8:24.01:274,24,0	1/1:8,0:8:21.92:157,22,0	1/1:9,0:9:21.77:131,22,0	1/1:0,6:6:3.01:68,3,0	0/0:7,0:7:15:0,15,159	0/0:2,0:2:5.99:0,6,50	0/1:6,0:6:9.03:9,0,55	1/1:5,0:5:15.01:136,15,0	1/1:29,0:29:9.03:156,9,0	1/1:7,0:7:17.87:136,18,0	1/1:14,0:13:35.20:261,35,0	1/1:5,0:5:13.64:82,14,0	1/1:3,0:3:3.11:8,3,0	./.	1/1:5,0:5:14.90:114,15,0	1/1:4,0:4:2.98:21,3,0	1/1:6,0:6:5.93:69,6,0	1/1:8,0:8:23.21:188,23,0	1/1:10,1:11:8.34:87,8,0	1/1:9,0:9:12.51:39,13,0
chr10	55764721	.	ATAT	A	4140.49	PASS	AB=1.000;AC=47;AF=0.870;AN=54;BaseQRankSum=0.312;DP=237;FS=3.201;HRun=0;HaplotypeScore=38.7683;InbreedingCoeff=0.4743;MQ=66.03;MQ0=1;MQRankSum=-1.790;QD=18.00;ReadPosRankSum=1.873;VQSLOD=3.1843;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:14:3.01:31,3,0	1/1:2,0:2:5.98:46,6,0	0/0:3,0:2:6:0,6,53	0/0:2,0:2:5.92:0,6,39	1/1:7,0:7:17.69:112,18,0	1/1:4,2:6:15.02:176,15,0	1/1:6,0:5:6:55,6,0	1/1:29,8:37:92.94:821,93,0	1/1:8,0:8:24:213,24,0	1/1:0,8:8:24.02:269,24,0	1/1:0,9:9:23.75:214,24,0	1/1:6,0:6:3:28,3,0	0/1:7,0:7:22.92:23,0,28	0/0:2,0:2:5.99:0,6,50	1/1:2,4:6:9.03:144,9,0	1/1:6,0:6:18.01:164,18,0	1/1:29,0:29:9.02:94,9,0	1/1:7,0:7:17.87:136,18,0	1/1:1,15:15:44.99:475,45,0	1/1:0,5:5:14.84:125,15,0	1/1:0,4:4:6.02:96,6,0	./.	1/1:6,0:6:17.90:141,18,0	1/1:4,0:4:2.92:17,3,0	1/1:6,0:6:5.85:45,6,0	1/1:0,8:8:24:229,24,0	1/1:2,10:12:15.03:201,15,0	1/1:0,11:11:18.53:289,19,0
chr10	55765156	.	AATTGGT	A	7312.46	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=13.424;DP=657;FS=17.337;HRun=0;HaplotypeScore=139.3187;InbreedingCoeff=0.9989;MQ=68.06;MQ0=0;MQRankSum=-15.301;QD=65.88;ReadPosRankSum=1.040;VQSLOD=4.5931;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:99:0,99,3574	0/0:11,0:11:33.11:0,33,1203	0/0:22,0:22:66.20:0,66,1979	0/0:18,0:18:51.18:0,51,1604	0/0:33,0:33:93.03:0,93,3349	0/0:25,0:25:75.26:0,75,2712	0/0:20,0:20:57.20:0,57,2126	0/0:33,0:33:99:0,99,3575	0/0:33,0:33:99:0,99,3681	0/0:25,0:25:75.25:0,75,2656	0/0:19,0:19:57.20:0,57,1986	1/1:0,19:19:54.19:1382,54,0	0/0:22,0:22:66.23:0,66,2314	0/0:32,0:32:96.33:0,96,3533	0/0:45,0:45:99:0,135,4963	1/1:0,31:31:84.29:2151,84,0	1/1:0,14:14:27.09:653,27,0	1/1:0,7:7:21.07:538,21,0	0/0:20,0:20:60.21:0,60,2171	0/0:22,0:22:66.23:0,66,2425	0/0:33,0:33:99:0,99,3653	1/1:0,13:14:39.13:996,39,0	1/1:0,11:11:30.10:766,30,0	1/1:0,15:15:32.80:827,33,0	0/0:20,0:20:60.21:0,60,2259	0/0:39,0:39:99:0,117,4344	0/0:20,0:20:60.21:0,60,2258	0/0:21,0:21:63.22:0,63,2331
chr10	55765358	.	CT	C	7093.38	PASS	AB=0.909;AC=35;AF=0.625;AN=56;BaseQRankSum=3.446;DP=560;FS=7.805;HRun=10;HaplotypeScore=69.4815;InbreedingCoeff=0.8978;MQ=70.66;MQ0=0;MQRankSum=1.338;QD=18.77;ReadPosRankSum=1.909;VQSLOD=5.7520;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,26:28:65.98:573,66,0	1/1:3,9:12:23.99:209,24,0	0/1:17,2:18:41.63:42,0,186	0/0:12,0:12:6.55:0,7,110	1/1:1,28:30:77:657,77,0	1/1:4,17:21:44.98:391,45,0	1/1:4,22:26:56.97:495,57,0	1/1:3,13:16:32.99:286,33,0	1/1:2,18:21:50.02:423,50,0	1/1:4,16:20:41.96:365,42,0	1/1:4,16:20:41.97:365,42,0	0/0:16,0:16:39.09:0,39,416	0/0:26,0:26:69.18:0,69,756	0/0:26,0:26:75.18:0,75,817	1/1:1,28:29:80.98:703,81,0	0/0:17,0:17:48.12:0,48,523	0/0:16,0:16:48.13:0,48,531	0/0:15,1:16:16.06:0,16,405	1/1:2,17:19:44.94:387,45,0	1/1:7,19:26:51.42:444,51,0	1/1:5,16:21:41.97:365,42,0	0/0:16,0:16:36.09:0,36,389	0/0:15,0:16:35.91:0,36,372	0/0:21,0:21:54.14:0,54,593	1/1:5,16:21:17.78:377,18,0	1/1:4,18:22:53.97:469,54,0	1/1:2,18:20:53.99:469,54,0	1/1:3,3:6:9:78,9,0
chr10	55765652	.	ACTG	A	1165.74	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.429;DP=595;FS=5.144;HRun=0;HaplotypeScore=82.3695;InbreedingCoeff=0.9654;MQ=72.69;MQ0=0;MQRankSum=-5.080;QD=41.63;ReadPosRankSum=-3.229;VQSLOD=3.8018;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,123,2744	0/0:10,0:10:30.10:0,30,692	0/0:22,0:22:57.54:0,58,1181	0/0:14,0:14:30.10:0,30,611	0/0:26,0:26:75.26:0,75,1707	0/0:32,0:32:93.31:0,93,2064	0/0:19,0:19:57.20:0,57,1313	1/1:3,25:28:75.26:1261,75,0	0/0:19,0:19:54.19:0,54,1224	0/0:20,0:20:57.20:0,57,1309	0/0:18,0:17:51.18:0,51,1155	0/0:25,0:25:69.24:0,69,1572	0/0:17,0:17:51.18:0,51,1156	0/0:21,0:21:60.21:0,60,1363	0/0:31,0:31:87.30:0,87,1987	0/0:44,0:44:99:0,129,2912	0/0:21,0:21:57.20:0,57,1314	0/0:8,0:8:21.07:0,21,468	0/0:19,0:19:57.18:0,57,1213	0/0:23,0:23:66.21:0,66,1439	0/0:19,0:19:57.20:0,57,1314	0/0:16,0:16:48.13:0,48,988	0/0:12,0:12:36.12:0,36,830	0/0:16,0:16:39.13:0,39,899	0/0:18,0:18:54.19:0,54,1238	0/0:25,0:25:75.25:0,75,1688	0/0:24,0:24:69.22:0,69,1517	0/0:4,0:4:12.04:0,12,276
chr10	55765773	.	G	GA	2302.94	PASS	AB=0.714;AC=14;AF=0.250;AN=56;BaseQRankSum=-6.423;DP=603;FS=0.881;HRun=11;HaplotypeScore=75.0127;InbreedingCoeff=0.6888;MQ=67.25;MQ0=2;MQRankSum=2.019;QD=13.96;ReadPosRankSum=0.853;VQSLOD=4.0087;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:2,0:19:30.54:0,31,88	0/0:12,0:12:35.86:0,36,279	0/0:21,1:16:3.61:0,4,82	0/0:20,0:15:10.87:0,11,102	0/0:14,0:44:55.41:0,55,181	0/0:17,0:19:34.89:0,35,261	0/0:19,0:22:42.87:0,43,313	0/0:19,1:21:16.38:0,16,298	0/0:19,1:22:9.45:0,9,237	0/0:17,0:17:29.83:0,30,232	0/0:25,0:27:52.41:0,52,380	0/1:6,17:24:9.86:414,0,10	0/0:20,0:20:47.77:0,48,367	0/0:15,0:15:41.82:0,42,321	0/0:21,0:22:58.82:0,59,447	1/1:10,15:25:2.52:382,3,0	1/1:4,17:23:18.82:347,19,0	1/1:4,10:15:6.67:235,7,0	0/0:22,2:26:5.93:0,6,387	0/0:21,0:22:22.27:0,22,344	0/1:10,2:11:21.52:22,0,37	1/1:5,14:19:13.47:311,13,0	1/1:9,18:27:24.02:458,24,0	1/1:4,15:19:12.83:312,13,0	0/0:19,2:21:14.30:0,14,288	0/0:25,0:25:56.74:0,57,441	0/0:26,0:29:65.80:0,66,477	0/0:12,0:12:26.88:0,27,209
chr10	55765842	.	C	CG	732.27	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.931;DP=598;FS=0.000;HRun=1;HaplotypeScore=103.5441;InbreedingCoeff=0.9751;MQ=86.48;MQ0=0;MQRankSum=-3.411;QD=16.27;ReadPosRankSum=-0.328;VQSLOD=3.5071;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,16:18:41.79:377,42,0	0/0:11,0:11:29.08:0,29,174	0/0:21,0:21:47.89:0,48,734	0/0:20,0:20:59.37:0,59,761	1/1:5,21:26:59.44:477,59,0	0/0:20,0:20:48.27:0,48,271	0/0:21,0:21:42.30:0,42,328	0/0:33,0:33:65.17:0,65,442	0/0:20,0:20:58.90:0,59,388	0/0:32,0:32:72.28:0,72,456	0/0:23,0:23:38.28:0,38,304	0/0:14,0:14:37.71:0,38,214	0/0:20,0:20:54.09:0,54,693	0/0:19,0:19:54.18:0,54,755	0/0:22,0:22:56.78:0,57,326	0/0:26,0:26:70.79:0,71,398	0/0:30,0:30:75.35:0,75,427	0/0:14,0:14:35.04:0,35,191	0/0:16,0:15:42.94:0,43,245	0/0:23,0:23:63.83:0,64,386	0/0:12,0:12:32.09:0,32,199	0/0:22,0:22:9.96:0,10,262	0/0:18,0:18:46.75:0,47,289	0/0:14,0:14:38.57:0,39,215	0/0:25,0:25:72.53:0,73,416	0/0:23,0:23:55.91:0,56,310	0/0:35,0:35:96.84:0,97,631	0/0:19,0:19:54.05:0,54,343
chr10	55765843	.	A	ATTG	1740.43	PASS	AB=0.556;AC=3;AF=0.054;AN=56;BaseQRankSum=5.330;DP=607;FS=0.566;HRun=0;HaplotypeScore=129.8008;InbreedingCoeff=0.7200;MQ=86.60;MQ0=0;MQRankSum=-4.417;QD=34.81;ReadPosRankSum=-0.804;VQSLOD=3.5428;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:4,16:19:4.36:720,0,4	0/0:11,0:11:9.11:0,9,319	0/0:22,0:22:60.03:0,60,1010	0/0:20,0:20:56.22:0,56,987	1/1:9,21:30:39.02:1127,39,0	0/0:20,0:20:51.13:0,51,566	0/0:21,0:21:63.14:0,63,703	0/0:33,0:33:63.21:0,63,916	0/0:20,0:20:60.18:0,60,727	0/0:31,0:32:67.25:0,67,967	0/0:24,0:24:40.61:0,41,636	0/0:14,0:14:39.11:0,39,434	0/0:20,0:20:54.16:0,54,956	0/0:19,0:19:54.19:0,54,1007	0/0:22,0:22:60.16:0,60,672	0/0:27,0:27:75.18:0,75,825	0/0:31,0:30:76.75:0,77,835	0/0:14,0:14:39.07:0,39,416	0/0:16,0:15:23.30:0,23,438	0/0:23,0:23:66.17:0,66,755	0/0:12,0:12:12.12:0,12,360	0/0:21,0:21:61.90:0,62,641	0/0:19,0:19:48.14:0,48,560	0/0:14,0:14:42.09:0,42,455	0/0:25,0:25:75.20:0,75,838	0/0:23,0:23:40.13:0,40,643	0/0:35,0:35:98.25:0,98,1144	0/0:19,0:19:57.15:0,57,669
chr10	55766390	.	GTGTGGTTAC	G	1442.06	PASS	AC=28;AF=0.778;AN=36;BaseQRankSum=4.785;DP=590;FS=10.009;HRun=0;HaplotypeScore=159.3933;InbreedingCoeff=0.5105;MQ=67.84;MQ0=1;MQRankSum=-3.483;QD=4.59;ReadPosRankSum=0.582;VQSLOD=2.2538;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:18.06:0,18,707	./.	./.	./.	0/0:19,0:19:6.02:0,6,201	1/1:24,2:26:12.01:187,12,0	./.	./.	1/1:18,2:20:3.01:80,3,0	1/1:28,1:29:3.01:80,3,0	1/1:30,1:31:3.01:60,3,0	1/1:16,0:16:5.85:58,6,0	0/0:18,0:18:12.04:0,12,429	0/0:21,0:21:24.08:0,24,1003	1/1:32,3:35:6.02:159,6,0	1/1:25,0:28:9.97:190,10,0	1/1:20,0:21:3.01:63,3,0	./.	./.	1/1:13,2:15:3.01:80,3,0	1/1:24,0:24:3.01:80,3,0	./.	./.	1/1:14,0:15:5.75:57,6,0	1/1:18,5:23:12.04:319,12,0	./.	1/1:16,7:23:2.80:79,3,0	1/1:7,1:8:3.01:80,3,0
chr10	55766908	.	TATA	T	484.29	PASS	AB=0.987;AC=10;AF=0.179;AN=56;BaseQRankSum=13.558;DP=501;FS=5.590;HRun=0;HaplotypeScore=104.0132;InbreedingCoeff=0.0120;MQ=70.57;MQ0=2;MQRankSum=-0.805;QD=2.83;ReadPosRankSum=6.111;VQSLOD=1.0738;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:33:0,33,167	0/0:6,0:6:12.01:0,12,117	0/0:27,0:10:17.26:0,17,256	0/0:24,0:15:7.11:0,7,110	0/1:14,0:14:14.38:14,0,88	0/0:17,0:17:35.86:0,36,352	0/0:13,0:13:32.71:0,33,331	0/0:33,2:35:27.23:0,27,443	0/0:10,0:10:23.99:0,24,250	0/0:20,0:20:52.56:0,53,554	0/0:17,0:18:42.65:0,43,462	0/1:16,0:16:36.85:67,0,37	0/0:14,0:14:39.98:0,40,490	0/0:14,0:14:39.07:0,39,578	0/0:20,0:20:44.90:0,45,462	0/1:22,0:23:48.73:118,0,49	0/1:30,0:30:92.70:98,0,93	0/1:14,0:14:44.46:57,0,44	0/1:15,1:16:11.77:12,0,365	0/0:13,0:13:35.06:0,35,274	0/0:6,0:6:17.24:0,17,121	0/1:30,0:30:56.87:138,0,57	0/1:21,0:21:59.80:65,0,60	1/1:7,0:7:15.11:64,15,0	0/0:16,0:16:37.75:0,38,366	0/0:21,1:22:19.12:0,19,423	0/0:26,0:25:33.60:0,34,593	0/0:17,0:17:40.32:0,40,542
chr10	55766910	.	TA	T	2280.25	PASS	AB=0.637;AC=40;AF=0.714;AN=56;BaseQRankSum=5.383;DP=523;FS=1.275;HRun=16;HaplotypeScore=81.7911;InbreedingCoeff=0.0738;MQ=68.08;MQ0=4;MQRankSum=1.394;QD=5.08;ReadPosRankSum=3.133;VQSLOD=2.4134;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,1:14:21.26:71,21,0	1/1:1,3:4:8.82:54,9,0	0/0:36,0:12:11.58:0,12,78	0/0:23,0:13:3.71:0,4,33	1/1:3,0:13:20.34:58,20,0	1/1:7,13:20:6.90:139,7,0	0/1:4,10:15:2.53:91,0,3	1/1:14,0:36:47.09:152,47,0	0/1:3,7:10:4.54:87,0,5	0/1:6,11:20:25.89:144,0,26	0/1:6,10:17:16.79:122,0,17	1/1:3,0:16:22.33:65,22,0	0/1:13,1:16:14.83:15,0,110	0/0:13,2:15:5.96:0,6,151	1/1:8,10:20:7.33:136,7,0	1/1:5,0:22:32.56:94,33,0	1/1:9,0:30:42.59:123,43,0	1/1:3,0:13:20.32:59,20,0	1/1:13,4:18:0.95:92,1,0	0/1:7,5:14:1.25:76,0,1	1/1:1,2:6:11.98:54,12,0	1/1:5,0:31:45.35:136,45,0	1/1:4,0:21:30.53:88,31,0	1/1:1,0:7:12.22:35,12,0	0/1:5,9:17:23.50:80,0,24	0/1:9,9:22:5.02:127,0,5	0/1:11,18:29:23.95:196,0,24	0/1:5,10:17:24.27:145,0,24
chr10	55767119	.	C	CTTTT	8993.97	PASS	AB=0.524;AC=47;AF=0.839;AN=56;BaseQRankSum=3.706;DP=574;FS=6.882;HRun=9;HaplotypeScore=117.6755;InbreedingCoeff=0.8114;MQ=70.93;MQ0=12;MQRankSum=-3.061;QD=20.96;ReadPosRankSum=1.370;VQSLOD=2.1772;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,1:22:42.60:666,43,0	1/1:0,0:2:6.02:97,6,0	0/0:52,0:28:45.69:0,46,579	0/0:51,0:27:15.80:0,16,277	1/1:3,1:17:39.09:561,39,0	1/1:5,9:16:18.06:428,18,0	1/1:4,9:15:24.08:486,24,0	1/1:8,0:21:15.77:212,16,0	1/1:1,12:13:18.06:409,18,0	1/1:7,16:24:48.14:916,48,0	1/1:2,8:12:24:425,24,0	0/1:1,0:11:3.03:92,0,3	0/0:22,0:22:57.13:0,57,797	0/0:15,0:15:36.08:0,36,526	1/1:2,18:20:15.05:360,15,0	1/1:5,0:25:42.93:178,43,0	1/1:4,0:22:15.29:144,15,0	1/1:2,0:20:18.11:196,18,0	1/1:10,7:20:30.10:573,30,0	1/1:2,17:19:39.01:606,39,0	1/1:3,6:11:15.05:310,15,0	1/1:3,0:22:22.29:174,22,0	1/1:2,0:19:38.93:157,39,0	1/1:5,0:17:32.50:142,32,0	1/1:2,6:8:6.02:132,6,0	1/1:7,17:30:63.14:1122,63,0	1/1:6,15:22:20.81:476,21,0	1/1:6,8:15:6.02:132,6,0
chr10	55767314	.	TTCTCTCTCTCTCTCTC	T	584.52	PASS	AB=0.966;AC=21;AF=0.420;AN=50;BaseQRankSum=3.935;DP=484;FS=0.000;HRun=0;HaplotypeScore=185.6434;InbreedingCoeff=0.1231;MQ=63.06;MQ0=25;MQRankSum=-2.462;QD=2.21;ReadPosRankSum=-0.344;VQSLOD=2.6310;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:26,1:27:3.48:71,3,0	0/1:11,0:11:99:108,0,107	./.	0/1:42,0:24:0:0,0,0	./.	0/0:9,0:9:8.60:0,9,50	0/0:26,0:27:5.96:0,6,44	0/0:28,0:25:3.02:0,3,8	0/1:11,0:10:41.49:41,0,64	0/0:15,0:13:15.02:0,15,227	0/0:6,0:6:3:0,3,27	1/1:6,6:13:7.57:170,8,0	0/0:18,0:18:12.98:0,13,541	0/0:18,0:18:3:0,3,25	0/1:19,0:19:58.46:58,0,160	1/1:11,7:18:3.01:38,3,0	1/1:14,3:16:1.34:127,1,0	0/1:9,0:8:9.39:14,0,9	0/0:17,0:16:10.26:0,10,132	0/0:13,0:13:6.02:0,6,135	1/1:26,0:26:0.47:1,0,0	1/1:5,0:5:3.01:50,3,0	1/1:10,1:12:0.47:1,0,0	./.	0/0:9,0:9:6.01:0,6,125	0/1:26,0:26:21.08:21,0,95	0/1:19,0:18:19.55:20,0,114	0/0:22,0:19:1.25:0,1,3
chr10	55767360	.	CTCTCTCTCTGTGTGTGTGTGTGTGTG	C	4543.72	PASS	AB=0.944;AC=26;AF=0.520;AN=50;BaseQRankSum=3.091;DP=416;FS=4.756;HRun=0;HaplotypeScore=199.4830;InbreedingCoeff=0.3512;MQ=34.34;MQ0=46;MQRankSum=0.166;QD=19.50;ReadPosRankSum=2.322;VQSLOD=3.7656;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:23:18.24:0,18,1371	0/1:8,0:7:32.95:142,0,33	./.	./.	0/0:24,0:21:17.85:0,18,1282	1/1:20,0:19:8.60:197,9,0	0/0:15,0:15:0.47:0,0,1	0/0:27,0:26:45.38:0,45,546	1/1:13,0:11:15.05:421,15,0	1/1:12,0:12:2.42:535,2,0	1/1:11,0:9:3.01:91,3,0	0/1:15,0:14:42:42,0,602	0/0:13,0:12:21.52:0,22,1211	0/0:15,0:15:12.27:0,12,630	1/1:17,0:17:18:356,18,0	0/0:26,0:22:9.81:0,10,480	0/1:13,0:8:43.32:43,0,190	0/0:7,0:4:8.39:0,8,469	1/1:17,0:15:27.51:807,28,0	0/1:12,0:10:79.60:80,0,229	1/1:22,0:19:0.47:1,0,0	0/1:7,0:5:0:0,0,0	1/1:12,0:11:0.47:1,0,0	./.	1/1:14,0:11:3.01:73,3,0	1/1:18,0:17:39.13:1413,39,0	0/1:11,11:20:9.86:340,0,10	0/0:8,0:2:0:0,0,0
chr10	55767366	.	C	CTGTGTGTGTGTG	496.15	PASS	AB=1.000;AC=14;AF=0.304;AN=46;BaseQRankSum=1.209;DP=429;FS=16.836;HRun=0;HaplotypeScore=180.2522;InbreedingCoeff=0.3758;MQ=35.54;MQ0=43;MQRankSum=-1.417;QD=3.70;ReadPosRankSum=-2.689;VQSLOD=0.6605;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:23:17.54:0,18,322	0/0:7,0:6:4.52:0,5,25	./.	./.	0/0:30,0:27:20.39:0,20,357	0/0:20,0:19:2.54:0,3,22	0/1:15,0:15:0:0,0,0	0/0:25,0:24:37.25:0,37,238	0/1:12,0:10:8.49:8,0,45	0/0:14,0:14:23.18:0,23,357	1/1:14,0:12:1.55:4,2,0	0/1:15,0:14:5.36:216,0,5	0/0:11,0:10:17.62:0,18,463	0/0:17,0:17:8.48:0,8,317	0/1:15,0:15:8.65:9,0,23	1/1:26,0:23:12.37:240,12,0	1/1:14,0:10:2.37:73,2,0	1/1:10,0:7:0.33:61,0,0	0/0:20,0:17:38.13:0,38,444	0/0:10,0:9:5.93:0,6,109	./.	./.	./.	0/0:12,7:19:2.92:0,3,17	1/1:13,0:10:2.84:14,3,0	0/0:18,0:18:30.17:0,30,469	0/0:22,0:20:20.78:0,21,231	0/0:7,0:2:5.93:0,6,40
chr10	55767368	.	CTGTGTGTGTGTGTGTGTG	C	3482.69	PASS	AB=0.771;AC=18;AF=0.375;AN=48;BaseQRankSum=4.823;DP=447;FS=14.719;HRun=0;HaplotypeScore=184.3928;InbreedingCoeff=0.4603;MQ=35.98;MQ0=44;MQRankSum=-1.024;QD=20.85;ReadPosRankSum=1.786;VQSLOD=1.6690;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:26:23.78:0,24,1748	0/1:6,1:6:25.55:26,0,44	./.	./.	0/0:31,0:28:26.23:0,26,1907	0/0:8,13:20:2.68:0,3,11	0/1:6,9:15:0:0,0,1	0/0:25,0:24:33.08:0,33,579	1/1:5,6:10:6.02:177,6,0	1/1:5,9:14:8.04:568,8,0	1/1:4,10:12:2.92:17,3,0	0/0:16,0:15:13.60:0,14,630	0/0:12,0:11:21.54:0,22,1363	0/0:17,0:17:15.25:0,15,807	1/1:5,9:15:5.98:130,6,0	0/0:30,0:27:17.18:0,17,921	0/0:14,0:10:6.38:0,6,169	0/0:9,0:6:15.05:0,15,638	1/1:8,12:17:36.53:940,37,0	0/1:5,5:9:79.60:80,0,150	1/1:9,12:18:0.47:1,0,0	./.	0/0:18,0:17:2.43:0,2,221	0/0:22,0:20:3.01:0,3,218	./.	1/1:5,13:18:36.02:1248,36,0	0/1:20,1:20:10.51:295,0,11	0/0:7,0:2:0:0,0,0
chr10	55767508	.	T	TTCC	46.20	PASS	AB=0.875;AC=8;AF=0.143;AN=56;BaseQRankSum=4.687;DP=287;FS=3.496;HRun=0;HaplotypeScore=56.0288;InbreedingCoeff=-0.1428;MQ=88.06;MQ0=0;MQRankSum=-1.962;QD=0.83;ReadPosRankSum=-0.969;VQSLOD=1.1518;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:3.44:0,3,112	0/0:1,0:1:3.01:0,3,33	0/0:27,0:23:52.55:0,53,778	0/0:13,0:11:24.41:0,24,253	0/1:8,0:8:12.54:13,0,101	0/1:4,2:7:32.14:32,0,136	0/0:10,0:10:11.26:0,11,180	0/0:18,0:18:48.14:0,48,761	0/1:7,1:8:54.48:54,0,155	0/1:5,0:7:2.72:3,0,144	0/1:1,0:2:24.66:33,0,25	0/0:12,0:12:33.06:0,33,533	0/0:13,0:13:33.08:0,33,517	0/0:13,0:13:32.94:0,33,502	0/1:15,0:15:3.14:3,0,86	0/0:15,0:14:35.97:0,36,464	0/0:20,0:20:56.88:0,57,862	0/0:7,0:7:20.98:0,21,264	0/0:4,0:5:5.95:0,6,99	0/0:2,0:2:2.22:0,2,7	0/0:6,1:8:5.95:0,6,42	0/0:8,0:8:24.08:0,24,371	0/0:12,0:12:36.07:0,36,508	0/0:12,0:12:30.02:0,30,414	0/1:5,0:5:17.63:18,0,26	0/0:5,0:6:6.26:0,6,71	0/0:14,1:15:11.83:0,12,129	0/1:3,0:3:9.23:13,0,9
chr10	55767519	.	C	CCT	560.86	PASS	AB=1.000;AC=14;AF=0.250;AN=56;BaseQRankSum=3.728;DP=319;FS=0.000;HRun=0;HaplotypeScore=62.6893;InbreedingCoeff=0.0877;MQ=80.40;MQ0=0;MQRankSum=-1.202;QD=4.71;ReadPosRankSum=-1.276;VQSLOD=2.1883;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,13:14:18.02:291,18,0	0/1:1,0:1:0:0,0,0	0/0:26,0:22:41.42:0,41,379	0/1:11,0:7:6.20:6,0,45	1/1:0,11:12:17.98:258,18,0	0/1:14,0:13:18.37:18,0,45	0/1:9,0:9:34.33:38,0,34	0/0:16,0:16:32.90:0,33,345	0/1:10,0:10:16.94:17,0,75	0/1:9,0:9:8.49:8,0,36	0/1:5,0:5:13.32:13,0,44	0/0:13,0:13:24.03:0,24,314	0/0:13,0:13:26.72:0,27,310	0/0:14,0:14:33:0,33,412	0/0:14,0:14:13.52:0,14,118	0/1:17,0:16:23.47:23,0,240	0/0:20,0:20:45.01:0,45,550	0/0:2,0:2:6.02:0,6,76	0/0:5,0:5:11.03:0,11,82	0/0:10,0:10:11.97:0,12,97	0/0:7,0:7:8.99:0,9,76	0/0:8,0:8:18.02:0,18,215	0/0:8,0:8:21.06:0,21,269	0/0:9,0:9:19.29:0,19,236	0/1:7,0:7:14.14:36,0,14	0/1:10,0:10:6.26:6,0,101	0/0:21,0:29:15.26:0,15,110	0/0:6,0:6:0.04:0,0,34
chr10	55769989	.	G	GAAA	8421.75	PASS	AB=0.791;AC=48;AF=0.857;AN=56;BaseQRankSum=2.029;DP=605;FS=0.762;HRun=11;HaplotypeScore=148.0599;InbreedingCoeff=0.7457;MQ=54.26;MQ0=18;MQRankSum=-3.346;QD=15.60;ReadPosRankSum=-2.479;VQSLOD=1.8132;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:12,0:30:5.69:69,0,6	1/1:2,1:5:14.99:200,15,0	0/0:27,0:9:11.40:0,11,121	0/1:22,0:8:7.30:7,0,8	1/1:8,0:18:17.64:54,18,0	1/1:8,20:29:34.54:433,35,0	1/1:6,13:24:23.91:276,24,0	1/1:7,0:29:64.51:515,65,0	1/1:8,6:15:16.51:172,17,0	1/1:10,12:22:30.02:453,30,0	1/1:9,9:19:32.15:299,32,0	1/1:19,1:20:44.94:489,45,0	0/0:17,0:18:35.81:0,36,372	0/0:19,0:20:29.77:0,30,303	1/1:14,11:24:32.63:298,33,0	1/1:18,0:19:29.99:377,30,0	1/1:23,8:31:37.67:622,38,0	1/1:12,4:17:36.04:514,36,0	1/1:18,2:18:19.79:235,20,0	1/1:8,9:19:35.93:346,36,0	1/1:21,8:25:35.33:374,35,0	1/1:22,0:21:40.93:374,41,0	1/1:14,0:14:24.85:268,25,0	1/1:21,3:32:50.40:698,50,0	1/1:3,9:12:17.03:219,17,0	1/1:16,9:28:45.02:614,45,0	1/1:9,8:17:22.53:272,23,0	1/1:9,1:10:20.97:244,21,0
chr10	55770029	.	G	GACAC	4672.99	PASS	AB=1.000;AC=36;AF=0.692;AN=52;BaseQRankSum=-2.377;DP=488;FS=6.733;HRun=0;HaplotypeScore=138.4678;InbreedingCoeff=0.5955;MQ=51.45;MQ0=15;MQRankSum=-0.763;QD=13.28;ReadPosRankSum=-0.804;VQSLOD=3.9481;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:22:2.19:25,2,0	1/1:2,0:8:8.29:37,8,0	./.	./.	1/1:12,1:15:10.41:119,10,0	1/1:17,5:24:24.44:442,24,0	1/1:24,0:26:17.53:289,18,0	1/1:29,0:26:41.61:287,42,0	1/1:12,3:17:33.45:496,33,0	1/1:14,3:16:38.72:629,39,0	1/1:9,3:13:3.01:73,3,0	0/0:17,0:18:5.27:0,5,77	0/0:15,0:16:36.08:0,36,503	0/0:16,0:17:41.48:0,41,603	1/1:18,2:19:18.06:343,18,0	0/0:13,0:13:1.98:0,2,8	0/1:26,0:27:11.75:12,0,63	0/1:15,0:17:1.13:1,0,5	1/1:17,0:14:20.94:320,21,0	1/1:8,1:9:12.03:235,12,0	1/1:10,27:37:8.53:67,9,0	0/0:11,0:12:4.47:0,4,12	0/0:7,0:7:3.50:0,3,10	0/0:25,0:29:1.59:0,2,5	1/1:7,1:8:3.01:73,3,0	1/1:11,2:14:35.53:520,36,0	1/1:14,3:17:30.02:474,30,0	1/1:1,7:9:11.78:231,12,0
chr10	55770044	.	A	ACG	2720.19	PASS	AB=0.992;AC=25;AF=0.446;AN=56;BaseQRankSum=3.829;DP=486;FS=10.666;HRun=0;HaplotypeScore=126.7467;InbreedingCoeff=0.3650;MQ=49.90;MQ0=12;MQRankSum=1.724;QD=9.45;ReadPosRankSum=9.199;VQSLOD=1.7097;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:23:8.43:0,8,73	1/1:7,0:7:8.97:71,9,0	0/0:6,0:2:2.96:0,3,19	0/0:10,0:2:5.96:0,6,46	0/0:15,0:15:2.43:0,2,64	0/1:24,0:24:46.98:47,0,48	0/1:27,0:27:24.69:25,0,136	0/0:20,0:17:48.05:0,48,331	0/1:15,1:16:48.77:104,0,49	0/1:18,0:16:18.07:18,0,109	0/1:12,0:12:2.86:3,0,20	1/1:3,14:17:17.24:633,17,0	0/0:15,0:14:42.08:0,42,568	0/0:18,0:18:51.06:0,51,684	0/0:23,0:22:18.50:0,19,151	1/1:2,10:12:21.06:355,21,0	1/1:4,22:27:11.01:414,11,0	1/1:5,14:18:33.07:543,33,0	0/0:19,0:14:34.81:0,35,262	0/0:7,0:7:3.89:0,4,32	0/1:43,0:39:26.87:27,0,99	1/1:3,11:13:15.52:273,16,0	1/1:0,6:6:6.02:110,6,0	1/1:5,24:29:18.03:265,18,0	1/1:6,0:6:0.47:1,0,0	0/0:19,0:19:18.33:0,18,273	0/0:22,0:22:24.03:0,24,240	0/1:11,0:11:18.88:19,0,29
chr10	55770386	.	C	CTTGT	532.03	PASS	AB=1.000;AC=8;AF=0.143;AN=56;BaseQRankSum=4.166;DP=315;FS=5.999;HRun=0;HaplotypeScore=61.4545;InbreedingCoeff=0.4271;MQ=68.47;MQ0=1;MQRankSum=-2.368;QD=8.58;ReadPosRankSum=-2.771;VQSLOD=0.9146;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,8:13:15.05:310,15,0	0/0:8,0:8:11.17:0,11,160	0/0:11,0:10:18.05:0,18,286	0/0:5,0:5:9.03:0,9,139	1/1:10,0:10:18.04:295,18,0	0/0:12,0:12:23.45:0,23,389	0/0:4,0:4:12.03:0,12,189	0/0:33,0:31:50.38:0,50,749	0/1:9,0:9:0.31:0,0,292	0/0:9,0:9:18.06:0,18,324	0/1:8,0:8:47.79:48,0,192	0/0:9,0:9:27.07:0,27,436	0/0:6,0:6:18.04:0,18,272	0/0:11,0:11:21.03:0,21,349	0/1:12,0:12:0.84:1,0,321	0/0:13,0:13:33.11:0,33,567	0/0:20,0:20:51.11:0,51,864	0/0:29,0:29:74.61:0,75,1218	0/1:10,0:10:4.83:5,0,255	0/0:6,0:6:12.04:0,12,212	0/0:13,0:13:21.02:0,21,290	0/0:5,0:5:9.02:0,9,133	0/0:5,0:5:8.89:0,9,90	0/0:2,0:2:3:0,3,25	0/0:9,0:9:22.02:0,22,348	0/0:10,0:10:17.79:0,18,258	0/0:20,0:20:27.62:0,28,605	0/0:13,0:13:32.10:0,32,589
chr10	55770940	.	TAG	T	4917.51	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=10.874;DP=668;FS=2.747;HRun=0;HaplotypeScore=83.6316;InbreedingCoeff=0.9983;MQ=80.50;MQ0=6;MQRankSum=-1.962;QD=34.63;ReadPosRankSum=2.349;VQSLOD=6.8085;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,114,2121	0/0:6,0:6:18.06:0,18,337	0/0:14,0:14:39.13:0,39,721	0/0:22,0:22:62.77:0,63,1058	0/0:23,0:23:66.23:0,66,1236	0/0:34,0:34:99:0,99,1836	0/0:31,0:31:90.31:0,90,1660	0/0:37,0:37:99:0,108,1995	0/0:19,0:19:54.19:0,54,1002	0/0:36,0:36:99:0,105,1967	0/0:15,0:15:42.14:0,42,779	1/1:1,23:23:54.18:795,54,0	0/0:28,0:28:81.28:0,81,1517	0/0:22,0:22:63.22:0,63,1150	0/0:33,0:33:96.33:0,96,1791	1/1:1,31:32:84.10:1237,84,0	1/1:2,20:21:51.17:751,51,0	1/1:0,15:13:36.12:524,36,0	0/0:25,0:25:75.26:0,75,1394	0/0:28,0:28:81.26:0,81,1478	0/0:31,0:31:90.31:0,90,1668	1/1:0,22:21:45.11:638,45,0	1/1:1,9:10:27.09:398,27,0	1/1:0,17:16:39.13:574,39,0	0/0:12,0:12:36.12:0,36,667	0/0:24,0:24:69.24:0,69,1292	0/0:35,0:34:99:0,105,1928	0/0:13,0:13:39.13:0,39,731
chr10	55771202	.	TTTTTC	T	3899.49	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=7.002;DP=577;FS=1.004;HRun=0;HaplotypeScore=122.5073;InbreedingCoeff=0.9120;MQ=60.19;MQ0=14;MQRankSum=-11.210;QD=30.70;ReadPosRankSum=4.943;VQSLOD=3.5792;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:45.01:0,45,943	0/0:9,0:9:21.04:0,21,361	0/0:49,0:21:9.90:0,10,182	0/0:36,0:14:0:0,0,109	0/0:26,0:26:54.15:0,54,1101	0/0:24,0:23:48.01:0,48,918	0/0:19,0:19:48.12:0,48,960	0/0:34,0:34:72.15:0,72,1304	0/0:17,0:17:24.08:0,24,522	0/0:19,0:19:25.41:0,25,508	0/0:18,0:18:36.10:0,36,722	1/1:4,15:19:45:782,45,0	0/0:19,0:19:51.13:0,51,1134	0/0:16,0:16:42.13:0,42,1034	0/0:16,0:16:30.09:0,30,655	1/1:1,19:20:44.90:862,45,0	1/1:7,14:21:33.52:594,34,0	1/1:3,11:14:13.44:392,13,0	0/0:26,0:23:27:0,27,296	0/0:19,0:19:36.10:0,36,709	0/0:11,0:11:11.92:0,12,259	1/1:6,21:27:50.78:813,51,0	1/1:1,11:12:17.97:341,18,0	1/1:6,8:14:5.95:115,6,0	0/0:17,0:17:20.79:0,21,400	0/0:19,0:19:38.59:0,39,782	0/0:17,0:17:38.90:0,39,696	0/0:16,0:16:45.15:0,45,975
chr10	55771212	.	C	CT	1040.94	PASS	AB=0.949;AC=11;AF=0.196;AN=56;BaseQRankSum=11.077;DP=572;FS=9.663;HRun=4;HaplotypeScore=96.8965;InbreedingCoeff=0.1590;MQ=58.58;MQ0=17;MQRankSum=-9.849;QD=4.98;ReadPosRankSum=4.083;VQSLOD=-0.3455;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:47.56:0,48,452	0/0:11,0:11:23.90:0,24,225	0/1:45,0:16:2.24:2,0,134	0/1:31,0:11:1.30:1,0,152	0/0:28,0:27:44.35:0,44,530	0/0:22,0:21:48.04:0,48,470	0/0:17,0:17:47.99:0,48,454	0/0:30,0:28:74.98:0,75,810	0/0:13,0:13:23.64:0,24,216	0/0:18,0:18:23.64:0,24,215	0/0:19,0:19:38.85:0,39,379	0/1:17,2:19:44.25:234,0,44	0/0:21,0:21:57.14:0,57,632	0/0:14,0:14:42.08:0,42,462	0/0:16,0:16:4.98:0,5,242	1/1:22,0:22:13.76:219,14,0	0/1:21,3:23:53.37:177,0,53	0/1:18,1:19:95.55:122,0,96	0/0:26,0:21:1.98:0,2,307	0/0:17,0:17:0.48:0,0,231	0/0:8,0:8:6.06:0,6,106	0/1:24,2:25:36.50:284,0,36	0/1:12,0:12:14.11:81,0,14	1/1:9,1:10:8.85:64,9,0	0/0:18,0:18:23.89:0,24,233	0/0:21,0:21:43.10:0,43,412	0/0:19,0:19:41.56:0,42,365	0/0:17,0:17:47.98:0,48,448
chr10	55771215	.	TTC	T	1559.80	PASS	AB=0.990;AC=15;AF=0.268;AN=56;BaseQRankSum=9.191;DP=568;FS=8.865;HRun=0;HaplotypeScore=100.8237;InbreedingCoeff=-0.1997;MQ=58.58;MQ0=18;MQRankSum=-9.836;QD=5.76;ReadPosRankSum=1.724;VQSLOD=2.5561;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:47.28:0,47,411	0/0:11,0:11:23.91:0,24,208	0/0:40,0:14:4.79:0,5,91	0/0:32,0:11:0.10:0,0,101	0/1:31,0:30:1.22:1,0,453	0/0:20,1:20:47.93:0,48,435	0/0:18,0:18:47.99:0,48,431	0/0:29,0:26:74.94:0,75,840	0/0:13,0:13:24.02:0,24,221	0/1:16,0:16:25.45:25,0,178	0/0:20,0:20:38.70:0,39,342	0/1:19,0:19:33.91:309,0,34	0/0:21,0:21:60.06:0,60,723	0/0:14,0:14:42.12:0,42,578	0/0:14,0:14:30.62:0,31,260	0/1:22,0:22:29.86:324,0,30	0/1:26,0:24:99:220,0,104	0/1:21,0:21:99:146,0,149	0/1:23,1:20:51.34:51,0,209	0/1:18,0:18:3.25:3,0,265	0/1:7,0:7:24.78:25,0,77	0/1:26,0:25:55.38:331,0,55	0/1:12,0:12:35.67:125,0,36	1/1:10,0:10:8.87:65,9,0	0/0:17,0:17:21.20:0,21,189	0/1:18,2:20:64.16:64,0,349	0/0:18,0:18:38.67:0,39,336	0/1:19,0:19:22.59:23,0,355
chr10	55771217	.	C	CTTT	3696.01	PASS	AB=1.000;AC=34;AF=0.607;AN=56;BaseQRankSum=-6.594;DP=586;FS=9.131;HRun=13;HaplotypeScore=109.9422;InbreedingCoeff=0.9276;MQ=56.99;MQ0=19;MQRankSum=7.030;QD=9.55;ReadPosRankSum=1.908;VQSLOD=0.5267;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:7,2:31:34.18:318,34,0	1/1:1,0:10:14.91:111,15,0	0/1:35,0:12:0.04:1,0,0	0/1:30,0:9:0:0,0,0	1/1:12,1:32:46.52:383,47,0	1/1:7,1:21:29.93:290,30,0	1/1:5,0:19:31.13:231,31,0	0/0:26,0:24:35.69:0,36,341	1/1:0,0:15:22.17:162,22,0	1/1:6,1:17:25.96:220,26,0	1/1:7,1:22:22.20:196,22,0	0/0:19,0:19:47.87:0,48,402	0/0:21,0:21:47.96:0,48,496	0/0:15,0:15:38.99:0,39,396	1/1:1,0:17:25.36:204,25,0	0/0:22,0:22:53.73:0,54,449	0/0:26,0:24:47.67:0,48,404	0/0:21,0:21:47.80:0,48,403	1/1:21,0:21:26.86:223,27,0	1/1:3,0:19:30.93:240,31,0	1/1:2,0:7:17.75:124,18,0	0/0:26,0:25:50.42:0,50,418	0/0:12,0:12:21.79:0,22,177	0/0:10,0:10:8.71:0,9,62	1/1:6,1:20:11.98:122,12,0	1/1:7,1:24:28.30:354,28,0	1/1:6,0:18:22.18:166,22,0	1/1:8,0:20:46.09:350,46,0
chr10	55772136	.	ATC	A	13412.73	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=9.764;DP=537;FS=13.178;HRun=0;HaplotypeScore=71.6727;InbreedingCoeff=0.9678;MQ=60.50;MQ0=5;MQRankSum=-1.157;QD=31.94;ReadPosRankSum=5.564;VQSLOD=6.3211;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,33:36:78.17:1013,78,0	1/1:0,3:3:9.03:122,9,0	0/0:18,0:14:39.12:0,39,656	0/0:22,0:18:47.72:0,48,757	1/1:2,11:13:26.95:365,27,0	1/1:4,14:18:36.12:486,36,0	1/1:3,14:15:39.13:527,39,0	0/0:44,0:42:99:0,114,1916	1/1:1,16:17:45.15:608,45,0	1/1:2,15:15:45.15:609,45,0	1/1:2,8:10:15.05:203,15,0	1/1:2,18:20:42.14:567,42,0	0/0:17,0:17:48.16:0,48,841	0/0:16,0:16:45.15:0,45,789	1/1:1,28:29:81.27:1095,81,0	1/1:1,30:31:84.28:1136,84,0	1/1:1,22:22:60.20:811,60,0	1/1:3,12:13:30.10:406,30,0	1/1:1,11:11:23.96:286,24,0	1/1:2,15:17:42.14:568,42,0	1/1:0,21:19:57.19:771,57,0	1/1:0,8:8:21.07:284,21,0	1/1:1,14:15:36.12:487,36,0	1/1:0,20:20:51.17:690,51,0	1/1:2,4:6:9.03:122,9,0	1/1:7,27:34:78.24:1038,78,0	1/1:5,22:27:63.21:852,63,0	1/1:0,9:9:27.09:365,27,0
chr10	55772367	.	AT	A	6562.06	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=10.467;DP=597;FS=6.141;HRun=9;HaplotypeScore=60.9869;InbreedingCoeff=0.9830;MQ=69.14;MQ0=8;MQRankSum=0.049;QD=19.89;ReadPosRankSum=3.429;VQSLOD=5.5271;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,43:48:99:988,108,0	1/1:2,7:8:12.01:110,12,0	0/0:27,0:12:8.95:0,9,44	0/0:29,0:17:21.73:0,22,152	1/1:4,18:22:13.43:377,13,0	1/1:1,20:21:48.02:439,48,0	1/1:3,17:20:39.01:357,39,0	0/0:38,0:38:96.17:0,96,1068	1/1:2,12:14:24.01:220,24,0	1/1:1,18:19:54.01:488,54,0	1/1:0,18:18:42.02:383,42,0	0/0:11,0:11:30.09:0,30,346	0/0:13,0:13:33.08:0,33,371	0/0:15,0:15:42.11:0,42,473	1/1:3,12:15:30.01:275,30,0	0/0:22,0:22:57.14:0,57,637	0/0:38,0:34:81.21:0,81,921	0/0:17,0:17:36.11:0,36,414	1/1:6,19:26:59.06:527,59,0	1/1:1,15:16:42.02:384,42,0	1/1:2,11:12:33.02:302,33,0	0/0:14,0:12:36.09:0,36,399	0/0:22,0:22:49.96:0,50,556	0/0:20,0:21:57:0,57,637	1/1:2,14:15:27.01:247,27,0	1/1:3,20:23:30.89:506,31,0	1/1:4,19:23:39.01:357,39,0	1/1:2,25:26:66.04:604,66,0
chr10	55773341	.	G	GGATT	33526.04	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-11.168;DP=736;FS=0.974;HRun=0;HaplotypeScore=101.0122;InbreedingCoeff=0.9961;MQ=84.22;MQ0=0;MQRankSum=-9.518;QD=51.90;ReadPosRankSum=3.013;VQSLOD=5.6050;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,35:41:93.32:2263,93,0	1/1:5,9:16:30.06:690,30,0	0/0:27,0:27:54.16:0,54,832	0/0:22,0:22:51.09:0,51,784	1/1:9,22:33:69.19:1618,69,0	1/1:2,24:26:63.22:1568,63,0	1/1:6,15:22:39.13:982,39,0	1/1:14,22:37:69.23:1655,69,0	1/1:4,10:15:30.10:754,30,0	1/1:10,22:35:84.23:1882,84,0	1/1:8,7:15:20.96:460,21,0	1/1:8,26:35:84.29:2036,84,0	0/0:19,0:19:48.16:0,48,816	0/0:22,0:22:60.20:0,60,1018	1/1:5,33:39:93.32:2322,93,0	1/1:8,34:42:99:2496,102,0	1/1:6,21:29:63.22:1586,63,0	1/1:3,12:15:30.06:700,30,0	1/1:8,12:20:36.12:906,36,0	1/1:13,30:45:99:2382,108,0	1/1:7,17:24:42.10:1002,42,0	1/1:6,12:18:39.13:922,39,0	1/1:7,14:21:39.13:941,39,0	1/1:6,18:24:48.12:1152,48,0	1/1:5,17:23:48.16:1170,48,0	1/1:12,21:33:81.28:1890,81,0	1/1:5,24:30:72.16:1698,72,0	1/1:2,6:8:18.06:453,18,0
chr10	55774241	.	T	TTGGGTTTCTC	43505.31	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-7.185;DP=554;FS=2.822;HRun=0;HaplotypeScore=123.3961;InbreedingCoeff=0.9621;MQ=65.79;MQ0=1;MQRankSum=-11.910;QD=94.99;ReadPosRankSum=1.054;VQSLOD=5.3093;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:10,12:23:27.09:1284,27,0	1/1:0,8:8:12:626,12,0	0/0:19,0:18:16.31:0,16,938	0/0:28,0:26:37.51:0,38,1109	1/1:5,18:23:54.10:2226,54,0	1/1:6,11:17:42.14:1969,42,0	1/1:3,17:22:30.10:1448,30,0	1/1:12,22:41:99:4256,111,0	1/1:4,6:10:24.08:1213,24,0	1/1:6,6:16:45.13:1642,45,0	1/1:8,14:27:69.12:2702,69,0	1/1:4,11:16:33.11:1713,33,0	0/0:25,0:25:75.26:0,75,2306	0/0:24,0:24:66.23:0,66,2031	1/1:5,12:20:42.14:2111,42,0	1/1:6,11:20:33.11:1575,33,0	1/1:6,13:24:33.11:1627,33,0	1/1:1,13:17:33.11:1653,33,0	1/1:6,10:21:60.15:2358,60,0	1/1:1,17:19:54.11:2383,54,0	1/1:6,8:16:12.04:508,12,0	1/1:6,7:14:33.11:1573,33,0	1/1:5,9:15:27.09:1339,27,0	1/1:4,10:16:27.09:1403,27,0	1/1:5,19:24:66.18:3249,66,0	1/1:4,15:20:60.19:2531,60,0	1/1:4,12:19:33.58:1646,34,0	1/1:0,7:9:9.03:470,9,0
chr10	55774395	.	G	GT	1798.86	PASS	AB=0.995;AC=35;AF=0.625;AN=56;BaseQRankSum=7.686;DP=520;FS=0.462;HRun=11;HaplotypeScore=144.3969;InbreedingCoeff=-0.0633;MQ=65.04;MQ0=2;MQRankSum=-4.771;QD=4.29;ReadPosRankSum=0.263;VQSLOD=0.9866;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:18:4.64:107,5,0	0/1:10,0:10:16.38:27,0,16	0/0:29,0:17:16.47:0,16,116	0/0:22,0:17:4.61:0,5,46	1/1:28,0:28:46.37:256,46,0	0/1:18,0:18:10.81:29,0,11	1/1:23,0:23:4.44:15,4,0	1/1:28,8:35:2.55:221,3,0	0/1:10,0:10:10.02:26,0,10	1/1:24,0:24:47.96:236,48,0	0/1:15,0:15:15.96:55,0,16	0/1:19,0:19:38.42:38,0,64	0/0:18,1:22:9.44:0,9,236	0/0:24,0:24:56.64:0,57,430	0/1:8,0:8:7.70:13,0,8	0/1:14,0:14:17.46:17,0,90	0/1:14,0:14:7.33:7,0,113	0/1:15,1:15:22.15:22,0,87	1/1:15,0:15:4.23:101,4,0	1/1:23,0:23:8.42:134,8,0	1/1:14,0:14:38.19:241,38,0	0/1:25,0:25:16.07:139,0,16	0/1:16,0:15:17.54:57,0,18	0/1:16,0:16:26.61:29,0,27	0/1:12,0:12:10.17:18,0,10	1/1:17,0:17:30.27:124,30,0	1/1:18,0:18:9.33:31,9,0	1/1:10,0:10:7.04:25,7,0
chr10	55774403	.	T	TGTTTGTTTGTTTGTTTG	26485.13	PASS	AB=0.669;AC=39;AF=0.696;AN=56;BaseQRankSum=-3.359;DP=627;FS=0.000;HRun=0;HaplotypeScore=209.3604;InbreedingCoeff=0.1954;MQ=55.97;MQ0=2;MQRankSum=-5.575;QD=49.88;ReadPosRankSum=3.494;VQSLOD=3.8832;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:2,0:22:10:499,0,10	1/1:1,8:13:19.87:1277,20,0	0/0:34,0:18:41.43:0,41,843	0/0:19,0:14:12.78:0,13,395	1/1:2,0:38:8.29:1057,8,0	1/1:0,14:22:30.10:2472,30,0	1/1:2,15:26:9.03:608,9,0	0/1:32,0:31:71.52:1750,0,72	1/1:2,6:14:15.05:1025,15,0	1/1:0,11:33:78.11:2543,78,0	1/1:1,5:22:26.98:1117,27,0	0/1:6,0:14:99:141,0,163	0/0:19,0:19:54.17:0,54,1903	0/0:23,0:23:69.21:0,69,1917	1/1:0,5:18:12.04:964,12,0	0/1:10,0:22:99:124,0,245	0/1:9,0:17:29.40:29,0,281	0/1:11,0:18:73.77:74,0,189	1/1:1,7:22:52.78:2450,53,0	1/1:0,17:32:50.95:2547,51,0	1/1:0,0:17:39.12:698,39,0	0/1:8,0:30:89.21:688,0,89	0/1:6,0:20:68.98:383,0,69	0/1:9,0:18:99:140,0,127	1/1:0,9:20:15.05:1234,15,0	1/1:1,10:25:60.19:2945,60,0	1/1:1,11:23:4.24:979,4,0	1/1:0,9:11:9.03:740,9,0
chr10	55774621	.	GT	G	6598.99	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=4.584;DP=615;FS=9.601;HRun=1;HaplotypeScore=77.2588;InbreedingCoeff=0.9997;MQ=63.93;MQ0=0;MQRankSum=2.005;QD=38.14;ReadPosRankSum=3.990;VQSLOD=5.1162;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:81.28:0,81,1294	0/0:9,0:9:27.09:0,27,432	0/0:22,0:18:54.01:0,54,763	0/0:17,1:17:41.07:0,41,502	0/0:13,0:13:39.12:0,39,600	0/0:17,0:17:45.15:0,45,709	0/0:36,0:36:99:0,105,1647	0/0:23,0:23:69.22:0,69,1056	0/0:24,0:24:72.25:0,72,1148	0/0:13,0:13:39.13:0,39,622	0/0:15,0:15:39.13:0,39,623	1/1:0,25:25:72.24:1006,72,0	0/0:19,0:19:57.19:0,57,911	0/0:24,0:23:69.24:0,69,1103	0/0:40,0:40:99:0,114,1822	1/1:1,43:44:75.44:1630,75,0	1/1:0,23:23:57.19:797,57,0	1/1:0,27:27:72.20:985,72,0	0/0:13,0:13:39.13:0,39,624	0/0:16,0:16:42.14:0,42,671	0/0:27,0:27:81.28:0,81,1288	1/1:0,20:20:60.20:839,60,0	1/1:0,15:15:45.15:629,45,0	1/1:1,18:19:51.17:713,51,0	0/0:20,0:20:60.19:0,60,936	0/0:21,0:21:63.21:0,63,1006	0/0:30,0:30:90.31:0,90,1438	0/0:13,0:13:39.10:0,39,575
chr10	55776084	.	TTTTTC	T	900.35	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.660;DP=592;FS=6.257;HRun=0;HaplotypeScore=107.3692;InbreedingCoeff=0.8062;MQ=67.07;MQ0=4;MQRankSum=-2.829;QD=20.46;ReadPosRankSum=-3.682;VQSLOD=2.0590;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:84.29:0,84,2349	0/0:11,0:11:24.06:0,24,558	0/0:19,0:11:21.03:0,21,322	0/0:21,0:13:1.10:0,1,154	0/0:20,0:20:44.82:0,45,1141	0/0:16,0:16:42.13:0,42,1093	0/0:16,0:16:36.04:0,36,858	1/1:15,29:44:74.97:995,75,0	0/0:16,0:16:39.13:0,39,1068	0/0:28,0:28:72.23:0,72,1678	0/0:21,0:21:48.15:0,48,1187	0/0:16,0:16:33.11:0,33,821	0/0:15,0:15:39.13:0,39,1066	0/0:13,0:13:27.09:0,27,766	0/0:19,0:19:51.16:0,51,1346	0/0:15,0:15:33.10:0,33,815	0/0:39,0:39:99:0,105,2884	0/0:31,0:31:60.67:0,61,1748	0/0:27,0:27:69.20:0,69,1754	0/0:15,0:15:42.12:0,42,991	0/0:17,0:17:39.12:0,39,1049	0/0:11,0:11:27.09:0,27,718	0/0:22,0:22:51.16:0,51,1321	0/0:21,0:21:60.08:0,60,1418	0/0:19,0:19:41.81:0,42,1012	0/0:28,0:28:69.18:0,69,1706	0/0:21,0:20:51.07:0,51,1187	0/0:18,0:18:33.07:0,33,832
chr10	55779908	.	G	GACACAC	20702.34	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-1.881;DP=584;FS=10.630;HRun=0;HaplotypeScore=152.9289;InbreedingCoeff=0.8625;MQ=54.98;MQ0=0;MQRankSum=-10.941;QD=41.65;ReadPosRankSum=1.357;VQSLOD=4.0923;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:16,10:24:33.11:1061,33,0	1/1:2,7:9:24.08:742,24,0	0/0:26,0:24:20.45:0,20,845	0/0:23,0:19:4.86:0,5,759	1/1:11,13:26:30.10:865,30,0	1/1:8,10:20:26.14:837,26,0	1/1:16,4:18:24.06:586,24,0	1/1:27,0:24:27.08:646,27,0	1/1:4,10:14:30.10:915,30,0	1/1:10,16:26:66.19:1867,66,0	1/1:9,10:21:36.12:1138,36,0	1/1:8,0:15:21.07:549,21,0	0/0:16,0:16:42.14:0,42,854	0/0:22,0:22:63.20:0,63,1322	1/1:9,15:26:45.15:1440,45,0	1/1:19,0:33:48.16:1217,48,0	1/1:6,0:12:15.05:346,15,0	1/1:11,0:13:9.03:237,9,0	1/1:10,10:21:41.81:1103,42,0	1/1:3,13:18:42.14:1396,42,0	1/1:13,0:13:6.02:159,6,0	1/1:15,0:21:8.76:237,9,0	1/1:17,1:21:9.03:236,9,0	1/1:9,0:19:15.05:345,15,0	1/1:8,15:23:42.09:1312,42,0	1/1:12,8:24:45.12:1241,45,0	1/1:15,13:30:60.21:1924,60,0	1/1:1,7:8:9.03:302,9,0
chr10	55780167	.	T	TC	10850.58	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=-14.077;DP=647;FS=1.801;HRun=3;HaplotypeScore=62.2263;InbreedingCoeff=0.9948;MQ=67.00;MQ0=2;MQRankSum=-1.215;QD=30.65;ReadPosRankSum=3.261;VQSLOD=4.7348;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,33:36:78.26:1075,78,0	1/1:0,5:5:12.04:165,12,0	0/0:18,0:17:24.35:0,24,371	0/0:19,0:17:32.75:0,33,357	1/1:3,24:27:59.93:797,60,0	1/1:0,19:18:39.13:536,39,0	1/1:3,23:26:48.16:662,48,0	0/0:35,0:35:96.22:0,96,1103	1/1:1,21:22:45.15:620,45,0	1/1:0,19:19:54.15:708,54,0	1/1:2,21:23:48.07:635,48,0	0/0:21,0:21:51.13:0,51,586	0/0:13,0:14:41.34:0,41,473	0/0:15,0:15:39.09:0,39,443	1/1:3,23:26:39.13:538,39,0	0/0:30,0:29:66.19:0,66,780	0/0:32,0:32:93.24:0,93,1096	0/0:29,0:29:84.19:0,84,965	1/1:1,18:19:54.14:686,54,0	1/1:0,19:19:54.18:740,54,0	1/1:3,36:39:87.29:1199,87,0	0/0:27,0:27:78.23:0,78,925	0/0:19,0:19:50.74:0,51,583	0/0:33,0:33:90.19:0,90,1018	1/1:1,24:25:60.20:827,60,0	1/1:0,22:22:66.14:836,66,0	1/1:1,17:18:39.13:537,39,0	1/1:2,7:9:21.07:289,21,0
chr10	55785208	.	C	CAACTGTCT	51228.13	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-2.636;DP=720;FS=6.643;HRun=0;HaplotypeScore=186.5774;InbreedingCoeff=0.9883;MQ=60.66;MQ0=0;MQRankSum=-14.982;QD=83.71;ReadPosRankSum=-1.693;VQSLOD=3.8557;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:18,29:50:99:3889,99,0	1/1:2,6:8:18.06:786,18,0	0/0:20,0:20:44.06:0,44,971	0/0:16,0:15:34.93:0,35,829	1/1:10,13:25:54.66:1640,55,0	1/1:4,10:16:27.05:1037,27,0	1/1:16,12:35:63.22:2186,63,0	1/1:12,15:30:87.28:3295,87,0	1/1:10,15:28:48.16:1989,48,0	1/1:6,16:24:69.24:2813,69,0	1/1:6,5:13:21.07:730,21,0	1/1:10,37:50:99:5087,123,0	0/0:34,0:34:99:0,102,2781	0/0:38,0:38:99:0,108,2987	1/1:13,26:42:90.31:3616,90,0	1/1:6,21:31:78.27:3253,78,0	1/1:7,16:24:42.14:1723,42,0	1/1:10,11:24:51.18:2111,51,0	1/1:9,6:16:39.12:1483,39,0	1/1:6,11:18:36.12:1166,36,0	1/1:14,11:29:45.15:1590,45,0	1/1:8,16:24:63.22:2181,63,0	1/1:7,4:13:18.06:550,18,0	1/1:4,13:20:30.10:1215,30,0	1/1:5,14:20:42.14:1623,42,0	1/1:7,22:33:90.29:3622,90,0	1/1:8,20:30:69.24:2987,69,0	1/1:3,5:9:13.99:656,14,0
chr10	55787018	.	C	CT	1244.51	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-8.931;DP=634;FS=0.684;HRun=2;HaplotypeScore=60.7980;InbreedingCoeff=0.9915;MQ=72.08;MQ0=0;MQRankSum=-0.460;QD=31.91;ReadPosRankSum=-3.354;VQSLOD=2.4042;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,120,1487	0/0:7,0:7:21.07:0,21,260	0/0:16,0:16:42.10:0,42,482	0/0:13,0:11:21.03:0,21,233	0/0:31,0:31:90.25:0,90,1088	0/0:21,0:21:63.20:0,63,781	0/0:27,0:27:81.25:0,81,1003	1/1:7,32:39:93.31:1339,93,0	0/0:20,0:20:60.17:0,60,725	0/0:29,0:29:81.25:0,81,993	0/0:16,0:16:48.15:0,48,594	0/0:26,0:26:74.97:0,75,904	0/0:20,0:20:57.18:0,57,706	0/0:17,0:17:51.16:0,51,632	0/0:27,0:27:81.24:0,81,991	0/0:21,0:21:60.19:0,60,744	0/0:28,0:28:70.99:0,71,910	0/0:25,0:25:75.17:0,75,897	0/0:24,0:24:66.21:0,66,818	0/0:25,0:25:72.22:0,72,882	0/0:21,0:21:63.19:0,63,769	0/0:15,0:15:45.13:0,45,545	0/0:14,0:14:33.10:0,33,408	0/0:17,0:17:51.16:0,51,632	0/0:25,0:25:75.24:0,75,927	0/0:30,0:30:84.26:0,84,1031	0/0:22,0:22:63.15:0,63,740	0/0:14,0:14:36.11:0,36,444
chr10	55788831	.	ACT	A	8149.61	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-10.912;DP=786;FS=1.328;HRun=0;HaplotypeScore=134.4745;InbreedingCoeff=0.9976;MQ=89.64;MQ0=1;MQRankSum=-2.749;QD=36.55;ReadPosRankSum=2.011;VQSLOD=6.2655;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,102,1227	0/0:8,0:8:24.07:0,24,288	0/0:34,0:34:66.91:0,67,1278	0/0:32,0:29:16.97:0,17,841	0/0:22,0:22:66.20:0,66,793	0/0:18,0:18:51.16:0,51,610	0/0:36,0:36:99:0,108,1214	0/0:41,0:41:99:0,114,2051	0/0:21,0:21:54.14:0,54,623	0/0:19,0:19:48.13:0,48,545	0/0:13,0:13:36.11:0,36,430	1/1:0,30:30:90.30:1260,90,0	0/0:37,0:37:99:0,111,1982	0/0:30,0:30:90.31:0,90,1621	0/0:53,0:53:99:0,156,1820	1/1:2,34:36:90.30:1261,90,0	1/1:2,43:45:99:1597,114,0	1/1:1,27:28:72.24:1008,72,0	0/0:16,0:16:45.09:0,45,489	0/0:17,0:17:51.15:0,51,610	0/0:32,0:32:90.22:0,90,1030	1/1:3,17:20:51.17:713,51,0	1/1:1,16:17:45.15:630,45,0	1/1:3,44:46:99:1681,120,0	0/0:14,0:14:42.10:0,42,475	0/0:26,0:26:75.21:0,75,841	0/0:48,0:48:99:0,141,1669	0/0:10,0:10:30.09:0,30,360
chr10	55789349	.	C	CCT	21402.92	PASS	AB=0.545;AC=43;AF=0.768;AN=56;BaseQRankSum=2.489;DP=664;FS=4.902;HRun=0;HaplotypeScore=123.1812;InbreedingCoeff=0.6872;MQ=77.35;MQ0=0;MQRankSum=-4.336;QD=38.91;ReadPosRankSum=7.359;VQSLOD=6.6531;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:41:31.02:735,31,0	1/1:0,10:11:27.09:548,27,0	0/0:18,0:17:48.10:0,48,698	0/0:19,0:19:54.13:0,54,778	0/1:4,0:31:24.18:589,0,24	1/1:1,23:26:66.23:1319,66,0	1/1:0,18:19:51.18:1030,51,0	0/0:34,0:34:96.30:0,96,1495	1/1:0,25:25:63.22:1272,63,0	1/1:0,20:20:60.19:1157,60,0	1/1:0,28:28:84.25:1648,84,0	1/1:0,0:26:54.04:529,54,0	0/0:27,0:27:81.21:0,81,1233	0/0:16,0:16:45.13:0,45,686	1/1:1,25:27:75.26:1492,75,0	1/1:1,0:23:46.08:567,46,0	1/1:3,0:38:56.24:824,56,0	0/1:3,0:24:3.52:443,0,4	1/1:2,16:19:48.95:932,49,0	1/1:1,20:21:60.09:1116,60,0	1/1:0,19:19:54.17:1053,54,0	1/1:3,0:27:6.58:588,7,0	0/1:4,0:17:24.43:340,0,24	1/1:1,0:11:4.13:196,4,0	1/1:1,21:23:54.19:1077,54,0	1/1:0,26:26:78.23:1505,78,0	1/1:3,29:32:84.28:1653,84,0	1/1:0,15:15:39.13:791,39,0
chr10	55789837	.	GT	G	1072.71	PASS	AB=0.957;AC=5;AF=0.089;AN=56;BaseQRankSum=3.617;DP=607;FS=5.088;HRun=10;HaplotypeScore=86.7192;InbreedingCoeff=0.7773;MQ=71.40;MQ0=2;MQRankSum=-1.451;QD=12.92;ReadPosRankSum=1.188;VQSLOD=3.7265;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,21:26:26.83:462,27,0	0/0:18,0:18:45.10:0,45,488	0/0:22,0:20:19.83:0,20,325	0/1:21,1:17:11.07:11,0,198	1/1:5,30:35:83.96:728,84,0	0/0:28,0:29:76.61:0,77,822	0/0:16,0:18:44.95:0,45,478	0/0:11,0:35:55.98:0,56,290	0/0:9,0:9:11.17:0,11,250	0/0:18,0:18:48.11:0,48,516	0/0:20,0:20:54.13:0,54,587	0/0:25,0:25:69.17:0,69,748	0/0:14,0:14:33.05:0,33,345	0/0:12,0:12:30.08:0,30,330	0/0:17,0:17:51.12:0,51,555	0/0:31,0:31:78.21:0,78,862	0/0:26,0:26:78.18:0,78,846	0/0:17,0:17:39.08:0,39,420	0/0:25,0:25:37.46:0,37,612	0/0:24,1:26:42.44:0,42,652	0/0:24,0:24:63.16:0,63,688	0/0:19,0:19:45.10:0,45,482	0/0:18,0:19:47.96:0,48,511	0/0:21,0:20:51.13:0,51,556	0/0:16,0:16:39.10:0,39,425	0/0:22,0:24:69:0,69,734	0/0:22,1:23:25.07:0,25,494	0/0:14,0:14:42.09:0,42,448
chr10	55790848	.	A	AT	1125.94	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-9.753;DP=841;FS=0.000;HRun=7;HaplotypeScore=119.9871;InbreedingCoeff=0.9957;MQ=81.34;MQ0=0;MQRankSum=-1.416;QD=27.46;ReadPosRankSum=-4.487;VQSLOD=0.9207;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:56:99:0,159,1521	0/0:13,0:13:33.05:0,33,319	0/0:22,0:22:48.07:0,48,461	0/0:28,0:28:66.05:0,66,625	0/0:33,0:33:93.15:0,93,897	0/0:21,0:21:60.10:0,60,579	0/0:26,0:26:75.09:0,75,713	1/1:6,35:41:99:1221,102,0	0/0:43,0:43:99:0,99,944	0/0:27,0:27:66.10:0,66,637	0/0:15,0:15:45.07:0,45,435	0/0:24,0:24:69.07:0,69,657	0/0:34,0:34:96.15:0,96,927	0/0:25,0:25:69.08:0,69,659	0/0:48,0:48:99:0,138,1327	0/0:37,0:37:99:0,99,951	0/0:41,0:41:99:0,117,1124	0/0:22,0:22:66.08:0,66,630	0/0:25,0:25:66.08:0,66,627	0/0:40,0:40:99:0,105,1014	0/0:40,0:39:99:0,108,1043	0/0:27,0:27:75.10:0,75,718	0/0:25,0:25:69.11:0,69,666	0/0:29,0:29:75.11:0,75,718	0/0:28,0:28:75.12:0,75,724	0/0:27,0:27:78.13:0,78,753	0/0:35,0:34:96.12:0,96,914	0/0:8,0:8:21.03:0,21,203
chr10	55790966	.	TG	T	11634.26	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=22.628;DP=804;FS=2.539;HRun=3;HaplotypeScore=107.1332;InbreedingCoeff=0.9994;MQ=80.72;MQ0=0;MQRankSum=-3.415;QD=32.23;ReadPosRankSum=1.334;VQSLOD=4.6226;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,156,2188	1/1:0,8:8:24.07:288,24,0	0/0:22,0:22:63.21:0,63,899	0/0:19,0:19:48.08:0,48,645	0/0:27,0:27:78.24:0,78,1086	1/1:0,29:29:72.22:864,72,0	1/1:1,32:33:87.27:1043,87,0	0/0:40,0:40:99:0,120,1680	1/1:1,30:31:84.26:1008,84,0	1/1:32,0:32:84.23:983,84,0	1/1:0,18:18:48.15:576,48,0	0/0:42,0:42:99:0,123,1770	0/0:33,0:33:93.30:0,93,1321	0/0:24,0:24:72.24:0,72,1036	1/1:0,40:40:99:1368,114,0	0/0:38,0:38:99:0,111,1579	0/0:47,0:47:99:0,138,1983	0/0:26,0:26:78.24:0,78,1103	1/1:1,20:21:60.16:698,60,0	1/1:2,9:11:24.54:289,25,0	1/1:0,32:32:90.28:1079,90,0	0/0:26,0:26:75.25:0,75,1080	0/0:23,0:23:69.21:0,69,958	0/0:22,0:22:66.22:0,66,951	1/1:1,20:21:51.16:610,51,0	1/1:0,37:37:99:1282,108,0	1/1:0,36:36:99:1188,99,0	1/1:0,12:12:30.09:360,30,0
chr10	55790969	.	GC	G	11649.73	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=22.673;DP=808;FS=1.806;HRun=1;HaplotypeScore=109.3370;InbreedingCoeff=0.9993;MQ=81.10;MQ0=0;MQRankSum=-2.086;QD=31.66;ReadPosRankSum=1.505;VQSLOD=4.6659;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,156,2431	1/1:8,0:8:24.07:288,24,0	0/0:22,0:22:63.18:0,63,924	0/0:19,0:20:27.81:0,28,704	0/0:26,0:26:75.26:0,75,1196	1/1:30,0:30:72.22:864,72,0	1/1:33,0:33:87.27:1043,87,0	0/0:43,0:43:99:0,129,1976	1/1:33,0:33:84.26:1008,84,0	1/1:3,30:33:84.24:998,84,0	1/1:18,0:18:48.15:576,48,0	0/0:42,0:42:99:0,123,1961	0/0:31,0:31:93.30:0,93,1455	0/0:25,0:25:75.24:0,75,1172	1/1:42,0:42:99:1368,114,0	0/0:36,0:36:99:0,108,1726	0/0:46,0:46:99:0,138,2151	0/0:25,0:25:75.26:0,75,1193	1/1:23,0:23:60.16:698,60,0	1/1:9,0:9:24.54:289,25,0	1/1:33,0:33:90.28:1079,90,0	0/0:27,0:27:78.25:0,78,1221	0/0:23,0:23:66.22:0,66,1048	0/0:22,0:22:66.23:0,66,1053	1/1:21,0:21:51.16:610,51,0	1/1:37,0:37:99:1282,108,0	1/1:36,0:36:99:1188,99,0	1/1:12,0:12:30.09:360,30,0
chr10	55791372	.	ACACG	A	3629.39	PASS	AB=0.952;AC=37;AF=0.685;AN=54;BaseQRankSum=2.594;DP=756;FS=7.570;HRun=0;HaplotypeScore=246.3835;InbreedingCoeff=0.5463;MQ=38.02;MQ0=28;MQRankSum=-5.288;QD=6.48;ReadPosRankSum=-2.421;VQSLOD=1.3616;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:35,0:34:4.50:19,5,0	1/1:8,5:13:22.20:301,22,0	0/1:34,0:5:1.79:2,0,39	0/0:48,0:10:25.84:0,26,168	0/1:13,3:16:0:0,0,0	1/1:18,4:21:0.12:34,0,0	1/1:27,2:27:18.66:130,19,0	1/1:21,0:20:19.07:301,19,0	1/1:23,5:28:35.21:334,35,0	1/1:33,2:33:29.43:491,29,0	./.	1/1:43,0:41:13.74:99,14,0	0/0:19,0:19:50.61:0,51,731	0/0:23,0:23:56.74:0,57,709	0/0:21,7:28:5.82:0,6,33	0/1:40,0:40:8.27:52,0,8	0/1:29,0:28:3.03:105,0,3	1/1:19,0:19:26.30:159,26,0	1/1:21,0:19:32.64:261,33,0	1/1:14,3:17:2.97:23,3,0	1/1:49,3:48:5.74:78,6,0	0/0:20,0:19:3.53:0,4,20	0/1:10,1:10:0:0,0,0	0/0:49,0:48:0.94:0,1,2	1/1:20,5:25:11.64:161,12,0	1/1:33,2:35:50.39:532,50,0	1/1:16,6:21:26.97:336,27,0	1/1:11,2:13:5.74:211,6,0
chr10	55791374	.	ACG	A	4620.97	PASS	AB=0.964;AC=37;AF=0.661;AN=56;BaseQRankSum=6.552;DP=741;FS=7.281;HRun=0;HaplotypeScore=227.3645;InbreedingCoeff=0.2355;MQ=37.83;MQ0=28;MQRankSum=-4.866;QD=7.54;ReadPosRankSum=1.811;VQSLOD=3.4133;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:7,26:32:27.04:383,27,0	1/1:13,0:13:20.70:134,21,0	0/1:33,0:4:1.79:2,0,39	0/0:48,0:11:20.89:0,21,158	0/1:16,0:16:11.07:11,0,87	0/1:21,0:20:1.12:19,0,1	1/1:27,2:27:1.26:154,1,0	0/1:23,0:22:35.44:328,0,35	1/1:28,0:28:38.79:223,39,0	1/1:34,0:32:31.11:378,31,0	0/0:10,0:9:6.02:0,6,66	0/1:31,9:38:15.57:378,0,16	0/0:19,0:19:14.52:0,15,472	0/0:23,0:23:62.71:0,63,634	0/0:27,0:27:5.34:0,5,22	1/1:35,5:40:11.82:108,12,0	1/1:22,7:28:32.35:470,32,0	1/1:17,2:19:40.09:297,40,0	1/1:18,0:16:4.10:199,4,0	0/1:14,1:15:48.67:49,0,54	0/1:46,2:44:11.28:11,0,24	1/1:17,3:19:5.95:204,6,0	1/1:11,1:11:6.02:84,6,0	1/1:34,15:48:22.81:361,23,0	0/1:22,1:23:17.76:51,0,18	1/1:34,1:35:43.67:506,44,0	0/1:22,0:21:80.71:139,0,81	1/1:12,1:13:6.17:133,6,0
chr10	55791378	.	ACG	A	350.05	PASS	AB=0.983;AC=18;AF=0.321;AN=56;BaseQRankSum=4.501;DP=709;FS=37.280;HRun=0;HaplotypeScore=244.8776;InbreedingCoeff=0.0853;MQ=37.48;MQ0=25;MQRankSum=-1.222;QD=0.98;ReadPosRankSum=1.240;VQSLOD=1.0888;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:34,0:33:12.55:101,13,0	1/1:15,1:16:6.55:44,7,0	0/0:32,0:4:6.96:0,7,138	0/0:45,0:12:31.01:0,31,463	1/1:13,0:13:0.89:3,1,0	0/0:21,0:20:4.24:0,4,17	0/0:30,0:29:11.90:0,12,33	0/0:24,0:24:57.96:0,58,367	0/1:27,0:27:8.33:44,0,8	0/1:30,0:28:10.77:11,0,117	0/0:9,0:8:1.82:0,2,5	0/1:36,0:35:26.31:34,0,26	0/0:21,0:21:56.67:0,57,961	0/0:21,0:21:60.14:0,60,1099	0/0:28,0:28:5.34:0,5,22	0/1:38,0:38:6.75:70,0,7	0/1:26,0:25:15.03:15,0,87	0/1:17,1:18:0.13:125,0,0	0/1:17,0:16:1.54:2,0,108	0/0:13,0:13:5.78:0,6,32	1/1:44,1:41:3.71:13,4,0	0/0:17,1:18:5.55:0,6,21	0/0:11,0:10:2.03:0,2,5	0/0:45,0:44:10.18:0,10,31	0/1:25,1:26:15.47:15,0,17	0/0:32,0:32:1.78:0,2,126	0/1:20,0:19:12.59:13,0,79	0/1:9,1:12:13.05:13,0,48
chr10	55791382	.	ACGCGCATG	A	2792.16	PASS	AB=0.957;AC=22;AF=0.393;AN=56;BaseQRankSum=8.889;DP=676;FS=0.000;HRun=0;HaplotypeScore=273.5465;InbreedingCoeff=-0.3389;MQ=37.29;MQ0=25;MQRankSum=-7.280;QD=5.87;ReadPosRankSum=-1.653;VQSLOD=1.4819;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:32:99:102,0,482	0/1:15,0:15:23.88:24,0,107	0/0:35,0:4:12.04:0,12,292	0/0:45,0:13:38.49:0,38,1099	1/1:12,0:12:2.98:22,3,0	0/1:20,0:19:7.42:25,0,7	0/1:29,0:28:66.69:210,0,67	0/0:20,0:20:60.16:0,60,1452	0/1:27,0:27:68.94:120,0,69	0/1:29,0:27:99:488,0,349	0/1:9,0:8:0:0,0,0	0/1:21,12:32:59.73:60,0,510	0/0:22,0:22:60.20:0,60,2304	0/0:22,0:22:63.22:0,63,2487	0/0:29,0:29:5.68:0,6,34	0/1:21,15:36:66.25:264,0,66	0/1:23,2:24:99:120,0,516	0/1:15,3:18:99:460,0,281	0/1:16,0:15:99:242,0,311	0/1:12,0:12:2.24:2,0,80	1/1:36,0:33:1.04:3,1,0	0/0:16,0:16:11.97:0,12,296	0/0:11,0:10:3.01:0,3,50	0/1:40,0:39:0.38:0,0,485	0/1:25,0:25:9.02:64,0,9	0/1:32,0:32:99:541,0,557	0/1:17,0:16:97.62:98,0,255	0/1:12,0:12:94.24:94,0,216
chr10	55791387	.	CAT	C	287.42	PASS	AB=0.984;AC=16;AF=0.286;AN=56;BaseQRankSum=8.245;DP=686;FS=8.618;HRun=0;HaplotypeScore=252.4597;InbreedingCoeff=-0.2777;MQ=37.06;MQ0=23;MQRankSum=-6.443;QD=0.84;ReadPosRankSum=1.475;VQSLOD=1.2204;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:35,0:34:14.02:14,0,355	0/1:14,1:15:14.21:14,0,108	0/0:40,0:5:15.02:0,15,264	0/0:47,0:15:40.69:0,41,784	0/0:12,0:12:1.68:0,2,5	1/1:20,0:20:0.79:2,1,0	0/1:27,0:26:35.61:36,0,45	0/0:22,0:22:63.21:0,63,1189	0/1:26,0:26:4.37:4,0,110	0/1:28,0:26:29:29,0,398	0/1:10,0:9:0:0,0,0	0/0:33,0:32:8.38:0,8,384	0/0:23,0:23:66.23:0,66,1292	0/0:22,0:22:54.33:0,54,1183	0/0:32,0:32:5.24:0,5,21	0/1:35,0:35:66.94:74,0,67	0/1:20,0:20:26.09:26,0,461	0/1:19,0:19:99:134,0,265	0/1:16,1:17:6.10:6,0,390	0/0:12,0:12:3.46:0,3,61	0/0:33,0:31:2.13:0,2,19	0/0:15,1:16:11.78:0,12,195	0/0:10,0:10:3.01:0,3,47	0/0:40,0:39:1.31:0,1,371	0/1:26,1:27:19.36:19,0,49	0/1:32,0:32:27.82:28,0,503	0/1:21,0:20:34.09:34,0,226	0/1:11,1:12:3.41:3,0,127
chr10	55791388	.	ATG	A	1657.31	PASS	AB=0.965;AC=19;AF=0.339;AN=56;BaseQRankSum=10.382;DP=687;FS=0.000;HRun=0;HaplotypeScore=248.4130;InbreedingCoeff=-0.2715;MQ=37.37;MQ0=23;MQRankSum=-7.319;QD=3.98;ReadPosRankSum=3.300;VQSLOD=2.5127;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:35,0:34:5.78:6,0,259	0/1:15,0:15:52.50:52,0,67	0/0:40,0:5:15.05:0,15,279	0/0:47,0:15:43.68:0,44,765	0/0:12,0:12:2.83:0,3,20	1/1:20,0:20:5.89:38,6,0	0/1:27,0:26:25.54:146,0,26	0/0:23,0:23:66.18:0,66,1173	0/1:25,0:25:45.46:88,0,45	0/1:28,0:26:99:224,0,324	0/1:12,0:11:0:0,0,0	0/1:33,0:32:10.23:10,0,316	0/0:23,0:23:66.22:0,66,1263	0/0:23,0:23:49.44:0,49,1211	0/0:32,0:32:5.24:0,5,21	0/1:32,2:34:45.81:151,0,46	0/1:19,1:20:55.72:56,0,333	0/1:17,3:20:99:340,0,174	0/1:16,1:17:99:105,0,303	0/0:12,0:12:2.99:0,3,50	0/0:33,0:31:2.21:0,2,18	0/0:9,7:16:11.78:0,12,183	0/0:7,3:10:3:0,3,25	0/1:30,9:38:22.79:23,0,276	1/1:25,0:26:2.43:72,2,0	0/1:32,0:32:99:309,0,315	0/1:20,1:20:99:109,0,156	0/1:12,0:12:50.77:78,0,51
chr10	55791390	.	G	GCA	809.76	PASS	AB=0.976;AC=21;AF=0.389;AN=54;BaseQRankSum=10.071;DP=690;FS=8.967;HRun=0;HaplotypeScore=257.2587;InbreedingCoeff=0.0261;MQ=37.35;MQ0=20;MQRankSum=-7.634;QD=2.01;ReadPosRankSum=1.856;VQSLOD=1.1321;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:31,1:31:21.94:22,0,149	0/0:15,0:15:3.96:0,4,51	0/0:42,0:7:11.40:0,11,121	0/0:45,0:16:38.76:0,39,414	0/0:12,0:12:2.96:0,3,19	1/1:21,0:21:3.46:24,3,0	1/1:26,0:25:7.17:27,7,0	0/0:21,0:21:48.15:0,48,611	0/0:25,0:25:7.49:0,7,53	0/1:28,0:26:68.03:68,0,208	0/1:13,0:12:0:0,0,0	0/1:33,1:33:21.94:22,0,159	0/0:23,0:23:60.15:0,60,759	0/0:24,0:24:66.18:0,66,812	1/1:31,0:31:4.07:12,4,0	0/1:36,3:39:16.77:211,0,17	0/1:20,1:21:62.77:63,0,188	0/1:19,2:21:99:314,0,110	0/1:16,0:16:34.99:35,0,137	0/0:13,0:13:3.01:0,3,30	0/1:31,0:29:0.41:0,0,0	1/1:20,0:20:2.04:6,2,0	./.	0/0:38,0:37:10.50:0,11,86	1/1:25,0:25:10.32:50,10,0	0/1:32,0:32:51.54:52,0,230	0/0:21,0:20:0.36:0,0,57	0/1:12,0:12:50.19:56,0,50
chr10	55791398	.	ACG	A	4301.90	PASS	AB=0.879;AC=38;AF=0.679;AN=56;BaseQRankSum=8.382;DP=701;FS=3.417;HRun=0;HaplotypeScore=246.1201;InbreedingCoeff=0.3194;MQ=42.32;MQ0=9;MQRankSum=-5.205;QD=7.82;ReadPosRankSum=0.001;VQSLOD=4.5435;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:31,2:32:37.61:91,0,38	1/1:4,12:16:11.95:125,12,0	0/0:33,0:10:5.20:0,5,233	0/0:45,0:25:46.96:0,47,596	0/1:15,0:15:10.53:62,0,11	1/1:7,14:23:6.02:85,6,0	1/1:10,17:27:27.36:348,27,0	0/0:21,0:21:34.12:0,34,752	1/1:16,7:24:23.37:245,23,0	1/1:16,9:29:32.77:652,33,0	0/1:3,9:12:0:0,0,0	0/1:33,0:32:43.71:127,0,44	0/0:26,0:26:55.96:0,56,1064	0/0:24,0:24:58.23:0,58,1097	0/1:8,23:31:10.61:11,0,13	0/1:41,0:41:21.98:145,0,22	0/1:19,1:20:10.57:162,0,11	1/1:20,0:20:17.30:242,17,0	1/1:11,5:15:10.77:324,11,0	1/1:9,4:15:5.99:49,6,0	1/1:30,7:34:4.11:27,4,0	0/1:20,0:20:3.11:40,0,3	1/1:10,0:10:3:25,3,0	1/1:37,0:36:4.75:68,5,0	1/1:13,9:23:9.03:128,9,0	1/1:17,16:35:70.74:930,71,0	1/1:7,10:18:15.79:170,16,0	1/1:6,5:11:25.14:246,25,0
chr10	55793658	.	GAAGGA	G	20808.86	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=17.406;DP=682;FS=0.607;HRun=0;HaplotypeScore=137.7635;InbreedingCoeff=0.9918;MQ=85.14;MQ0=2;MQRankSum=-8.668;QD=51.89;ReadPosRankSum=5.734;VQSLOD=5.2771;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,49:51:83.01:2509,83,0	1/1:1,5:6:9.03:192,9,0	0/0:24,0:24:60.18:0,60,1462	0/0:26,0:26:55.59:0,56,1706	1/1:1,30:31:87.23:1713,87,0	1/1:2,14:16:36.12:767,36,0	1/1:2,20:21:51.18:1086,51,0	0/0:36,0:36:93.30:0,93,2671	1/1:2,19:20:42.14:895,42,0	1/1:1,29:30:87.23:1705,87,0	1/1:1,11:12:33.11:677,33,0	0/0:23,0:23:69.22:0,69,2048	0/0:23,0:23:63.22:0,63,1914	0/0:24,0:24:66.21:0,66,1996	1/1:0,40:40:99:2109,99,0	0/0:32,0:32:93.31:0,93,2636	0/0:13,0:13:39.12:0,39,1153	0/0:16,0:16:48.16:0,48,1486	1/1:2,18:20:57.14:1076,57,0	1/1:1,21:22:54.13:1105,54,0	1/1:1,19:20:45.11:914,45,0	0/0:16,0:16:48.15:0,48,1381	0/0:26,0:26:75.24:0,75,2221	0/0:22,0:22:66.20:0,66,1884	1/1:0,24:24:54.19:1150,54,0	1/1:0,29:29:87.29:1804,87,0	1/1:2,41:43:99:2340,111,0	1/1:0,14:14:36.12:767,36,0
chr10	55795812	.	G	GGA	667.99	PASS	AB=0.625;AC=17;AF=0.304;AN=56;BaseQRankSum=3.403;DP=448;FS=3.513;HRun=0;HaplotypeScore=87.7149;InbreedingCoeff=-0.2593;MQ=62.79;MQ0=3;MQRankSum=1.603;QD=2.51;ReadPosRankSum=-1.065;VQSLOD=1.7427;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:37:46.73:0,47,306	0/0:0,0:4:0.22:0,0,10	0/0:7,0:6:8.10:0,8,127	0/1:9,0:7:9.72:10,0,84	0/1:4,0:18:24.10:24,0,104	0/1:6,0:17:1.98:2,0,146	0/0:3,0:16:13.91:0,14,147	0/1:9,0:26:16.94:17,0,229	0/1:0,0:7:10.45:10,0,22	0/0:10,0:19:17.16:0,17,248	0/0:2,0:11:20.37:0,20,139	0/1:5,1:13:29.98:95,0,30	0/0:15,0:15:45.12:0,45,684	0/0:18,0:20:53.06:0,53,652	0/1:1,0:16:27.50:27,0,44	0/1:7,1:23:69.51:76,0,70	0/1:12,0:35:99:111,0,104	0/1:5,0:18:22.29:22,0,44	0/1:4,0:14:10.56:11,0,65	0/1:7,0:13:10.13:10,0,143	0/1:13,0:20:54.83:55,0,200	0/1:1,0:3:15.52:16,0,21	0/1:2,0:5:17.71:26,0,18	1/1:2,0:25:14.33:314,14,0	0/0:2,0:12:24.78:0,25,85	0/0:5,0:16:32.03:0,32,170	0/0:4,0:18:20.40:0,20,160	0/0:4,0:7:18.05:0,18,112
chr10	55795936	.	A	AG	1077.67	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=0.978;DP=351;FS=0.680;HRun=2;HaplotypeScore=88.8755;InbreedingCoeff=0.8695;MQ=79.37;MQ0=5;MQRankSum=-2.254;QD=31.70;ReadPosRankSum=0.324;VQSLOD=3.2889;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,14:16:40.94:532,41,0	0/0:9,0:9:27.07:0,27,313	0/0:32,0:13:32.77:0,33,282	0/0:40,0:20:15.80:0,16,212	1/1:2,16:18:52.01:667,52,0	0/0:4,0:4:9.01:0,9,90	0/0:12,0:12:27.03:0,27,305	0/0:14,0:14:39.11:0,39,469	0/0:5,0:5:15.01:0,15,148	0/0:16,0:16:45.10:0,45,521	0/0:14,0:14:40.25:0,40,430	0/0:12,0:12:35.92:0,36,395	0/0:9,0:9:24.52:0,25,246	0/0:13,0:13:35.99:0,36,402	0/0:7,0:6:9.01:0,9,91	0/0:8,0:8:18.06:0,18,222	0/0:22,0:22:54.03:0,54,592	0/0:7,0:7:18.02:0,18,206	0/0:13,0:13:33.06:0,33,375	0/0:11,0:11:18.75:0,19,256	0/0:3,0:3:8.86:0,9,88	0/0:6,0:6:16.59:0,17,178	0/0:8,0:8:18.01:0,18,185	0/0:8,0:8:17.99:0,18,192	0/0:10,0:10:27.06:0,27,308	0/0:14,0:14:14.86:0,15,375	0/0:6,0:7:20.53:0,21,205	0/0:12,0:12:27.07:0,27,317
chr10	55795964	.	AAAC	A	3466.19	PASS	AB=0.998;AC=42;AF=0.750;AN=56;BaseQRankSum=-3.266;DP=387;FS=5.019;HRun=0;HaplotypeScore=85.2477;InbreedingCoeff=0.0520;MQ=61.01;MQ0=11;MQRankSum=-1.204;QD=9.50;ReadPosRankSum=-3.008;VQSLOD=2.2588;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:11,7:18:34.60:425,35,0	1/1:1,5:6:8.98:107,9,0	0/1:49,0:15:41.63:42,0,54	0/1:45,1:14:18.46:18,0,28	1/1:10,10:20:53.68:623,54,0	1/1:5,0:5:4.72:21,5,0	1/1:13,0:13:3.25:29,3,0	1/1:13,0:13:0.31:160,0,0	0/1:8,0:8:0.91:23,0,1	1/1:17,0:17:27.52:216,28,0	1/1:11,2:13:27.69:228,28,0	0/1:11,0:11:14.14:118,0,14	0/0:12,0:12:33:0,33,529	0/0:10,0:10:27.06:0,27,453	1/1:9,0:8:5.81:33,6,0	0/1:12,0:11:46.16:53,0,46	0/1:15,0:15:60.21:60,0,63	0/1:10,0:10:40.60:81,0,41	1/1:13,0:10:12.40:168,12,0	1/1:10,1:11:11.31:125,11,0	1/1:7,0:5:11.95:96,12,0	0/1:7,0:7:19.13:19,0,41	0/1:9,0:9:37.49:75,0,37	0/1:4,0:4:1.34:1,0,15	1/1:11,2:13:17.74:182,18,0	1/1:13,0:13:22.96:210,23,0	1/1:10,0:10:20.61:98,21,0	1/1:12,1:13:31.69:254,32,0
chr10	55795965	.	AAC	A	4472.13	PASS	AB=0.933;AC=45;AF=0.804;AN=56;BaseQRankSum=-3.198;DP=380;FS=9.887;HRun=0;HaplotypeScore=75.8382;InbreedingCoeff=0.2432;MQ=60.12;MQ0=10;MQRankSum=0.234;QD=12.49;ReadPosRankSum=-3.153;VQSLOD=2.6400;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:18:32.01:344,32,0	1/1:6,0:6:8.96:74,9,0	0/1:45,0:15:30:44,0,30	0/1:42,0:12:18.36:18,0,35	1/1:17,4:21:56.94:538,57,0	1/1:4,1:5:5.98:60,6,0	1/1:1,11:12:8.65:91,9,0	1/1:8,4:12:11.41:255,11,0	0/1:1,7:8:4.09:70,0,4	1/1:1,16:17:29.98:291,30,0	1/1:4,9:13:29.86:325,30,0	1/1:11,0:11:17.06:156,17,0	0/0:12,0:12:27.14:0,27,385	0/0:10,0:10:26.67:0,27,346	1/1:1,8:8:6.02:80,6,0	0/1:12,0:11:6.51:83,0,7	0/1:15,0:15:1.37:79,0,1	1/1:10,0:10:0.01:106,0,0	1/1:13,0:10:22.35:222,22,0	1/1:3,8:11:15.60:227,16,0	1/1:6,1:5:11.95:96,12,0	1/1:7,0:7:11.46:53,11,0	0/1:9,0:9:2.98:128,0,3	0/1:4,0:4:2.45:5,0,2	1/1:3,10:13:18.04:204,18,0	1/1:10,3:13:32.24:300,32,0	1/1:7,3:10:27.04:301,27,0	1/1:12,1:13:34.96:320,35,0
chr10	55795966	.	AC	A	4308.83	PASS	AB=0.935;AC=51;AF=0.911;AN=56;BaseQRankSum=0.227;DP=377;FS=9.024;HRun=1;HaplotypeScore=71.2310;InbreedingCoeff=0.5879;MQ=59.06;MQ0=10;MQRankSum=-1.245;QD=12.14;ReadPosRankSum=-1.336;VQSLOD=2.1339;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:18:33.97:324,34,0	1/1:5,1:6:8.92:63,9,0	1/1:39,4:14:9.99:75,10,0	0/1:40,3:12:23.18:23,0,34	1/1:19,1:20:56.68:424,57,0	1/1:1,4:5:6:66,6,0	1/1:11,1:12:9:82,9,0	1/1:15,0:15:27.60:221,28,0	1/1:8,0:8:6.76:51,7,0	1/1:16,0:16:29.91:241,30,0	1/1:11,2:13:29.78:244,30,0	1/1:11,0:11:31.60:214,32,0	0/0:12,0:12:25.53:0,26,258	0/0:10,0:10:17.77:0,18,229	1/1:8,1:8:5.99:49,6,0	1/1:12,0:11:21.52:136,22,0	1/1:15,0:15:36.37:228,36,0	1/1:10,0:10:16.64:170,17,0	1/1:10,2:9:26.15:209,26,0	1/1:10,1:11:23.68:189,24,0	1/1:7,0:5:11.95:96,12,0	1/1:7,0:7:15.69:87,16,0	1/1:8,1:9:20.09:151,20,0	1/1:4,0:4:5.12:24,5,0	1/1:12,0:12:17.94:141,18,0	1/1:14,0:14:31.94:282,32,0	1/1:10,0:10:26.92:221,27,0	1/1:11,2:13:35.90:301,36,0
chr10	55795970	.	AAAAC	A	829.03	PASS	AB=0.972;AC=16;AF=0.286;AN=56;BaseQRankSum=-1.845;DP=369;FS=3.566;HRun=0;HaplotypeScore=94.0378;InbreedingCoeff=-0.1154;MQ=55.88;MQ0=9;MQRankSum=-2.752;QD=4.21;ReadPosRankSum=-5.708;VQSLOD=-0.4771;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:17:14.06:171,14,0	0/0:6,0:6:1.56:0,2,28	0/1:37,0:12:18.14:18,0,81	0/0:39,0:11:12.98:0,13,72	1/1:20,1:21:30.12:231,30,0	0/0:5,0:5:5.85:0,6,59	0/0:15,0:15:18.05:0,18,196	0/1:8,8:16:39.14:212,0,39	0/0:8,0:8:7.71:0,8,44	0/0:15,0:15:23.69:0,24,124	0/0:13,0:13:2.21:0,2,179	0/1:11,0:11:66.89:95,0,67	0/0:12,0:12:32.98:0,33,664	0/0:10,0:10:27.01:0,27,510	0/0:9,0:8:1.78:0,2,33	0/1:12,0:11:41.89:42,0,44	0/1:15,0:15:26.71:27,0,135	0/1:9,0:10:76.04:76,0,81	0/1:13,0:10:32.36:32,0,45	0/0:12,0:12:13.50:0,13,241	0/0:6,0:4:3.84:0,4,11	0/1:8,0:8:12.26:12,0,65	0/1:9,0:9:39.76:40,0,90	0/1:4,0:4:0.10:0,0,20	0/0:12,0:12:16.86:0,17,128	0/1:13,0:13:11.66:12,0,166	0/0:10,0:10:12.93:0,13,160	0/1:11,0:11:19.80:20,0,141
chr10	55795974	.	CA	C	325.87	PASS	AB=0.934;AC=7;AF=0.125;AN=56;BaseQRankSum=0.848;DP=356;FS=8.928;HRun=11;HaplotypeScore=80.4184;InbreedingCoeff=0.1850;MQ=52.19;MQ0=8;MQRankSum=-1.944;QD=3.02;ReadPosRankSum=0.205;VQSLOD=-0.3811;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:12,5:17:0.99:168,0,1	0/0:6,0:6:6.01:0,6,62	0/1:31,1:12:7.79:8,0,31	0/0:32,0:9:14.81:0,15,101	1/1:8,13:21:29.37:228,29,0	0/0:6,0:6:3.48:0,3,32	0/0:15,0:15:17.98:0,18,173	0/1:13,0:14:1.87:2,0,33	0/0:8,0:8:3.47:0,3,10	0/0:15,0:15:21.50:0,22,162	0/0:13,0:13:20.96:0,21,201	0/0:10,0:10:7.76:0,8,28	0/0:12,0:12:27.06:0,27,281	0/0:11,0:11:24.01:0,24,232	0/0:8,0:7:3.01:0,3,32	0/0:12,0:11:9.21:0,9,45	0/0:15,0:15:13.45:0,13,81	0/1:11,0:11:3.87:4,0,41	0/1:12,1:10:36.10:36,0,49	0/0:12,0:12:21.01:0,21,206	0/0:6,0:4:6.01:0,6,63	0/0:9,0:9:9.85:0,10,64	0/0:11,0:11:1.01:0,1,59	0/0:4,0:4:3.87:0,4,25	0/0:11,0:11:17.91:0,18,153	0/0:12,0:12:22.70:0,23,205	0/0:10,0:10:12.02:0,12,119	0/0:10,0:10:14.83:0,15,139
chr10	55796079	.	GCGCGCGCATACATGCACA	G	387.32	PASS	AB=1.000;AC=7;AF=0.146;AN=48;BaseQRankSum=1.530;DP=350;FS=1.660;HRun=0;HaplotypeScore=152.2669;InbreedingCoeff=0.5440;MQ=71.02;MQ0=0;MQRankSum=-1.571;QD=9.22;ReadPosRankSum=-0.548;VQSLOD=2.3731;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:24.07:0,24,941	0/0:6,0:6:12.04:0,12,856	0/0:17,0:14:15.50:0,15,220	0/0:17,0:11:12.72:0,13,180	0/0:14,0:14:26.88:0,27,1770	0/0:16,0:16:18:0,18,822	0/0:32,0:32:48.06:0,48,2927	0/1:11,0:11:12.27:12,0,32	0/0:4,0:4:2.96:0,3,19	0/0:9,0:9:18.06:0,18,863	0/0:9,0:9:9.03:0,9,585	./.	0/0:12,0:12:30.10:0,30,1913	0/0:8,0:8:24.08:0,24,1522	0/0:7,0:7:9.03:0,9,569	./.	1/1:7,4:11:6:172,6,0	1/1:8,2:10:6.02:296,6,0	0/0:11,0:11:15.04:0,15,655	0/0:3,0:3:9.03:0,9,667	0/0:45,0:45:57.10:0,57,3293	./.	0/0:2,8:10:0.32:0,0,1	1/1:8,2:10:2.99:24,3,0	0/0:20,0:20:21.03:0,21,1068	0/0:17,0:17:24.29:0,24,917	0/0:4,0:4:5.67:0,6,169	./.
chr10	55796105	.	ATACATGCACACACGCGCACGCG	A	397.05	PASS	AB=1.000;AC=8;AF=0.154;AN=52;BaseQRankSum=3.118;DP=371;FS=4.270;HRun=0;HaplotypeScore=155.9198;InbreedingCoeff=0.1969;MQ=67.45;MQ0=0;MQRankSum=-3.193;QD=7.79;ReadPosRankSum=-2.557;VQSLOD=2.3029;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:25.80:0,26,872	0/0:5,0:5:12.04:0,12,735	0/0:17,0:12:17.14:0,17,321	0/0:30,0:15:12.22:0,12,157	0/0:13,0:13:27.09:0,27,1516	0/0:21,0:21:12.98:0,13,646	0/0:32,0:32:48.16:0,48,2482	1/1:1,8:9:15.33:257,15,0	./.	0/0:14,0:14:13.25:0,13,708	0/0:6,0:6:12.04:0,12,487	0/0:12,0:12:3.01:0,3,40	0/0:13,0:13:35.61:0,36,1921	0/0:12,0:12:27.09:0,27,1832	0/0:11,0:11:9.97:0,10,485	0/0:7,0:7:3.37:0,3,17	0/1:10,0:10:85.60:86,0,128	0/1:12,0:12:99:157,0,223	0/1:7,0:7:5.35:5,0,750	0/0:5,0:5:12.04:0,12,805	0/0:45,0:45:54.18:0,54,2965	./.	0/0:12,0:12:10.27:0,10,168	1/1:7,0:7:0.14:0,0,0	0/0:15,0:15:18.04:0,18,965	0/0:16,0:16:23.83:0,24,776	0/1:6,0:6:10.01:10,0,94	0/0:2,0:2:3.48:0,3,40
chr10	55796135	.	GCACACACA	G	698.37	PASS	AB=0.955;AC=19;AF=0.396;AN=48;BaseQRankSum=-3.227;DP=385;FS=1.380;HRun=0;HaplotypeScore=115.1088;InbreedingCoeff=0.1394;MQ=45.83;MQ0=12;MQRankSum=-0.200;QD=3.75;ReadPosRankSum=2.042;VQSLOD=1.7973;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:22:5.10:5,0,14	0/0:3,0:3:0:0,0,0	./.	./.	0/0:10,0:9:2.92:0,3,17	0/0:20,0:20:6.36:0,6,37	0/0:30,0:29:5.94:0,6,26	1/1:10,0:10:2.68:11,3,0	0/0:11,0:10:9.42:0,9,76	0/1:17,0:17:29.29:75,0,29	0/0:5,0:5:2.94:0,3,18	1/1:11,3:11:2.91:70,3,0	0/0:4,0:12:5.43:0,5,48	0/1:7,0:13:5.11:5,0,94	0/0:13,0:13:6.63:0,7,31	1/1:3,0:11:2.61:55,3,0	1/1:9,12:21:5.32:74,5,0	1/1:10,14:23:10.35:337,10,0	0/1:12,0:11:50.40:52,0,50	0/1:6,0:5:0:0,0,0	./.	./.	1/1:10,2:11:2.73:74,3,0	0/0:15,10:23:0.09:0,0,0	0/0:16,0:16:9.42:0,9,83	0/1:21,0:20:33.18:33,0,158	0/0:7,0:7:3.59:0,4,10	0/1:3,0:3:39.36:39,0,49
chr10	55796141	.	A	ACGCGCG	1806.52	PASS	AB=0.862;AC=22;AF=0.440;AN=50;BaseQRankSum=0.728;DP=373;FS=8.828;HRun=0;HaplotypeScore=109.1051;InbreedingCoeff=0.3447;MQ=41.89;MQ0=19;MQRankSum=-3.356;QD=7.40;ReadPosRankSum=-0.983;VQSLOD=1.6201;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:23:53.61:83,0,54	0/1:3,0:3:0:0,0,0	0/0:3,0:2:1.82:0,2,5	0/0:5,0:1:0.47:0,0,1	./.	0/1:0,18:19:0:0,0,0	1/1:10,1:28:0.74:14,1,0	0/0:9,0:9:21.80:0,22,306	0/0:9,2:11:2.84:0,3,16	1/1:3,13:16:30.03:449,30,0	./.	0/0:14,0:11:2.63:0,3,41	0/0:12,0:12:18.53:0,19,383	0/0:13,0:13:18.06:0,18,381	0/1:3,8:13:0.07:1,0,0	0/0:11,0:11:2.61:0,3,48	0/0:19,0:19:0.22:0,0,156	0/1:25,0:23:0.04:0,0,502	0/1:8,2:9:17.91:346,0,18	1/1:6,0:6:0.47:1,0,0	0/1:24,0:23:0:0,0,0	./.	0/0:12,0:11:8.63:0,9,199	0/1:22,0:20:0.24:0,0,0	1/1:11,2:14:3.01:73,3,0	1/1:8,12:21:12.54:721,13,0	1/1:10,0:8:3.77:70,4,0	1/1:3,0:3:9.03:176,9,0
chr10	55796143	.	A	ACGCGCGCG	2252.85	PASS	AB=0.937;AC=24;AF=0.480;AN=50;BaseQRankSum=0.008;DP=367;FS=15.226;HRun=0;HaplotypeScore=113.9374;InbreedingCoeff=0.2194;MQ=39.67;MQ0=23;MQRankSum=-2.076;QD=8.47;ReadPosRankSum=-0.905;VQSLOD=1.0411;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:19,2:23:63.44:120,0,63	1/1:2,0:3:0.47:1,0,0	0/0:3,0:2:3.01:0,3,46	./.	0/1:6,1:7:0:0,0,0	0/1:19,0:19:0:1,0,0	1/1:25,0:23:3.47:25,3,0	0/0:9,0:9:16.92:0,17,351	0/0:5,5:10:2.57:0,3,17	1/1:17,0:16:29.67:611,30,0	./.	0/0:15,0:12:2.87:0,3,56	0/0:12,0:12:18.32:0,18,476	0/0:13,0:13:18.06:0,18,486	0/1:14,0:14:0:1,0,0	0/0:10,0:10:2.53:0,3,61	0/1:19,0:19:26.98:27,0,273	0/1:24,0:22:15.25:15,0,588	0/1:6,1:9:30.61:449,0,31	0/1:9,0:6:0:1,0,0	1/1:23,0:21:2.50:18,3,0	./.	0/0:12,0:11:8.23:0,8,263	0/1:23,0:21:0:0,0,0	1/1:4,1:13:3.01:79,3,0	0/1:22,0:18:8.92:692,0,9	1/1:11,0:9:7.73:105,8,0	1/1:2,0:3:9.03:245,9,0
chr10	55797026	.	GGAAA	G	511.49	PASS	AB=0.889;AC=3;AF=0.054;AN=56;BaseQRankSum=2.569;DP=619;FS=19.041;HRun=0;HaplotypeScore=113.9281;InbreedingCoeff=0.6373;MQ=60.09;MQ0=17;MQRankSum=-3.307;QD=18.27;ReadPosRankSum=-3.254;VQSLOD=1.2445;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:63.41:0,63,1150	0/0:6,0:6:18.06:0,18,351	0/0:57,0:12:23:0,23,196	0/0:48,0:18:18.12:0,18,177	0/0:18,0:18:51.14:0,51,1152	0/0:15,0:16:33:0,33,505	0/0:11,0:11:27.53:0,28,444	1/1:14,6:19:43.30:566,43,0	0/0:14,0:14:33.84:0,34,579	0/0:34,0:33:67.33:0,67,1164	0/0:23,0:23:39.50:0,39,708	0/0:21,0:21:52.56:0,53,932	0/0:16,0:16:48.13:0,48,852	0/0:15,0:15:42.07:0,42,634	0/0:30,0:30:45.47:0,45,1128	0/0:17,0:17:45.14:0,45,1019	0/0:34,0:32:82.38:0,82,1833	0/0:21,0:20:49.95:0,50,1045	0/0:20,0:20:48.64:0,49,705	0/0:14,0:14:25.01:0,25,456	0/1:7,1:8:51.71:52,0,69	0/0:16,0:16:45.10:0,45,794	0/0:19,0:18:51.10:0,51,875	0/0:11,0:11:29.99:0,30,584	0/0:19,0:19:31.13:0,31,591	0/0:25,0:25:51.08:0,51,798	0/0:38,0:37:79.55:0,80,1467	0/0:24,0:24:33.83:0,34,581
chr10	55797027	.	G	GAAA	4808.10	PASS	AB=0.900;AC=28;AF=0.500;AN=56;BaseQRankSum=-2.715;DP=639;FS=6.978;HRun=17;HaplotypeScore=106.9515;InbreedingCoeff=0.7892;MQ=59.50;MQ0=18;MQRankSum=-3.144;QD=15.03;ReadPosRankSum=-1.801;VQSLOD=2.6041;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:25:26.77:0,27,302	1/1:3,0:6:11.97:129,12,0	0/0:58,0:12:8.23:0,8,53	0/0:46,0:17:5.33:0,5,32	0/0:19,0:19:23.03:0,23,211	1/1:6,7:17:19.20:211,19,0	1/1:7,2:11:21.03:264,21,0	0/1:22,0:21:58.71:95,0,59	1/1:9,2:16:3.27:264,3,0	1/1:29,2:32:11.50:421,11,0	1/1:14,8:26:30.81:319,31,0	0/0:17,0:21:6.04:0,6,188	0/0:13,0:16:15.37:0,15,142	0/0:13,0:14:7.99:0,8,77	1/1:24,5:31:28.97:587,29,0	0/0:14,0:17:22.52:0,23,210	0/0:33,0:33:32.87:0,33,439	0/0:20,0:20:28.18:0,28,269	1/1:12,0:21:33.74:394,34,0	1/1:6,8:14:21.06:260,21,0	0/1:6,1:8:0.59:84,0,1	0/0:15,0:16:10.20:0,10,108	0/0:16,0:18:10.66:0,11,99	0/0:9,0:11:16.54:0,17,157	1/1:9,10:20:25.85:350,26,0	1/1:16,12:30:45.40:501,45,0	1/1:31,4:39:73.96:771,74,0	1/1:9,1:24:19.88:157,20,0
chr10	55800334	.	G	GCTT	30980.17	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-10.892;DP=665;FS=1.553;HRun=0;HaplotypeScore=86.3696;InbreedingCoeff=0.9877;MQ=71.91;MQ0=1;MQRankSum=-5.396;QD=52.96;ReadPosRankSum=3.260;VQSLOD=6.7026;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,38:41:84.25:1881,84,0	1/1:2,5:7:18.02:366,18,0	0/0:15,0:14:35.30:0,35,638	0/0:23,0:23:55.32:0,55,826	1/1:2,11:14:23.80:302,24,0	1/1:0,20:20:48.16:1101,48,0	1/1:0,24:24:63.17:1403,63,0	1/1:8,24:34:84.24:1728,84,0	1/1:1,18:19:48.16:1106,48,0	1/1:3,19:23:54.16:1186,54,0	1/1:0,6:6:15.01:296,15,0	1/1:1,33:35:89.34:2007,89,0	0/0:23,0:23:66.21:0,66,1116	0/0:19,0:19:54.16:0,54,889	1/1:0,34:35:72.16:1561,72,0	1/1:2,36:39:93.32:2134,93,0	1/1:1,34:35:84.21:1836,84,0	1/1:0,27:27:75.19:1677,75,0	1/1:1,13:14:42.14:927,42,0	1/1:0,23:25:57.58:1215,58,0	1/1:2,33:36:93.23:2041,93,0	1/1:1,12:13:32.98:613,33,0	1/1:0,9:9:24.04:504,24,0	1/1:0,23:24:51.18:1176,51,0	1/1:1,24:25:57.15:1265,57,0	1/1:1,35:35:96.32:2151,96,0	1/1:3,34:38:96.29:2159,96,0	1/1:0,6:6:15.05:344,15,0
chr10	55801282	.	CAGCCTGA	C	6904.72	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=13.362;DP=628;FS=0.874;HRun=0;HaplotypeScore=150.5463;InbreedingCoeff=0.9986;MQ=84.49;MQ0=0;MQRankSum=-14.888;QD=53.94;ReadPosRankSum=3.037;VQSLOD=4.9212;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,147,5314	0/0:11,0:11:30.10:0,30,1015	0/0:16,0:16:42.09:0,42,1330	0/0:30,0:29:69.10:0,69,2417	0/0:20,0:20:54.19:0,54,2112	0/0:23,0:23:69.23:0,69,2584	0/0:28,0:28:84.29:0,84,3298	0/0:37,0:37:99:0,105,3896	0/0:29,0:29:84.29:0,84,3324	0/0:21,0:21:57.19:0,57,2175	0/0:13,0:13:39.13:0,39,1559	1/1:2,24:26:66.23:1712,66,0	0/0:19,0:19:54.19:0,54,2154	0/0:31,0:31:93.32:0,93,3713	0/0:14,0:14:39.13:0,39,1447	1/1:2,24:26:60.21:1557,60,0	1/1:1,11:12:27.09:701,27,0	1/1:3,14:17:33.11:857,33,0	0/0:23,0:23:63.14:0,63,2338	0/0:12,0:12:36.11:0,36,1231	0/0:29,0:29:84.27:0,84,3250	1/1:0,13:13:33.11:856,33,0	1/1:3,9:12:21.07:545,21,0	1/1:4,18:22:27.09:677,27,0	0/0:11,0:11:33.11:0,33,1243	0/0:27,0:27:72.22:0,72,2544	0/0:32,0:31:93.28:0,93,3611	0/0:23,0:23:63.22:0,63,2517
chr10	55801826	.	C	CT	6569.31	PASS	AB=0.653;AC=38;AF=0.679;AN=56;BaseQRankSum=-4.287;DP=530;FS=9.262;HRun=12;HaplotypeScore=63.9415;InbreedingCoeff=0.4157;MQ=67.43;MQ0=0;MQRankSum=-1.180;QD=15.35;ReadPosRankSum=0.383;VQSLOD=5.4026;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:33:81.57:0,82,579	1/1:4,6:11:17.86:160,18,0	0/0:13,0:11:14.75:0,15,95	0/1:8,0:4:0:0,0,0	0/0:17,1:19:20.55:0,21,303	1/1:4,17:22:38.90:365,39,0	0/1:4,5:9:4.80:102,0,5	1/1:10,23:33:57.03:536,57,0	0/1:6,11:17:0.88:153,0,1	1/1:7,16:24:25.33:370,25,0	0/1:5,8:14:18.97:128,0,19	0/1:8,14:22:6.88:255,0,7	0/0:16,0:16:38.62:0,39,281	0/0:21,0:21:50.38:0,50,371	1/1:2,16:18:30.05:292,30,0	1/1:7,16:24:26:401,26,0	1/1:3,18:23:47.75:437,48,0	0/1:5,25:30:2.62:462,0,3	0/1:12,11:23:17.78:306,0,18	1/1:7,16:23:2.93:326,3,0	1/1:2,3:5:9.01:88,9,0	1/1:2,1:3:3:29,3,0	1/1:10,4:14:4.87:183,5,0	1/1:1,6:7:18.03:175,18,0	0/1:2,10:13:7.93:241,0,8	1/1:7,23:30:60.08:576,60,0	1/1:8,27:36:65.93:627,66,0	1/1:3,15:18:20.16:358,20,0
chr10	55803429	.	C	CA	1517.02	PASS	AB=0.903;AC=15;AF=0.268;AN=56;BaseQRankSum=-8.397;DP=342;FS=0.590;HRun=8;HaplotypeScore=62.1822;InbreedingCoeff=0.7383;MQ=52.50;MQ0=17;MQRankSum=2.413;QD=12.97;ReadPosRankSum=0.614;VQSLOD=3.0341;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:25,3:27:1.89:2,0,250	0/0:5,0:5:5.98:0,6,55	0/0:10,0:5:8.18:0,8,102	0/0:7,0:4:12:0,12,106	0/0:16,0:15:19.06:0,19,119	0/0:11,0:11:15.01:0,15,136	0/0:8,0:3:6:0,6,55	0/0:21,0:16:6.06:0,6,35	0/0:7,0:7:9:0,9,82	0/0:11,0:11:24.01:0,24,219	0/0:7,0:6:8.99:0,9,82	1/1:1,4:4:6.02:69,6,0	0/0:14,0:14:29.99:0,30,268	0/0:8,0:8:5.04:0,5,34	0/0:9,0:8:18.01:0,18,164	1/1:5,6:9:9.03:104,9,0	1/1:13,29:36:26.37:808,26,0	1/1:1,11:12:33.08:369,33,0	0/0:18,0:16:41.95:0,42,370	0/0:12,0:12:33.01:0,33,296	0/0:4,0:4:3:0,3,27	1/1:3,3:6:6.02:69,6,0	1/1:3,6:9:15.04:170,15,0	1/1:0,3:3:9.03:104,9,0	0/0:7,0:7:15.01:0,15,137	0/0:19,0:18:36:0,36,329	0/0:15,0:15:24.01:0,24,219	0/0:15,0:13:35.98:0,36,324
chr10	55803446	.	TA	T	977.90	PASS	AB=1.000;AC=6;AF=0.107;AN=56;BaseQRankSum=4.264;DP=314;FS=0.686;HRun=3;HaplotypeScore=62.9669;InbreedingCoeff=0.4795;MQ=58.94;MQ0=5;MQRankSum=-1.679;QD=12.87;ReadPosRankSum=1.578;VQSLOD=2.1565;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,22:25:26.18:757,26,0	0/0:3,0:3:6.02:0,6,84	0/0:11,0:7:15:0,15,172	0/1:9,0:7:10.41:10,0,187	1/1:3,11:13:30.07:334,30,0	0/0:10,0:10:12.04:0,12,170	0/0:6,0:4:9.03:0,9,127	0/1:28,0:23:5.80:6,0,129	0/0:6,0:6:15.05:0,15,213	0/0:9,0:9:27.09:0,27,384	0/0:4,0:4:12.04:0,12,150	0/0:6,0:5:12.04:0,12,170	0/0:12,0:12:36.12:0,36,513	0/0:3,0:3:6.02:0,6,84	0/0:8,0:7:18.06:0,18,252	0/0:8,0:6:15.05:0,15,207	0/0:37,0:34:87.25:0,87,1218	0/0:19,0:18:54.18:0,54,770	0/0:18,0:16:45.15:0,45,625	0/0:8,0:8:18.06:0,18,240	0/0:1,0:1:3.01:0,3,43	0/0:3,0:3:6.02:0,6,84	0/0:5,0:5:9.03:0,9,130	0/0:3,0:3:9.03:0,9,129	0/0:7,0:7:18.06:0,18,259	0/0:19,0:19:48.16:0,48,671	0/0:8,0:8:21.07:0,21,302	0/0:24,0:24:69.23:0,69,971
chr10	55803469	.	T	TCC	6405.34	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=-6.619;DP=383;FS=25.919;HRun=6;HaplotypeScore=65.6016;InbreedingCoeff=0.9008;MQ=67.99;MQ0=0;MQRankSum=1.298;QD=34.62;ReadPosRankSum=1.224;VQSLOD=3.2541;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:22:83.24:142,0,83	1/1:0,4:4:12.04:203,12,0	0/0:20,0:20:48.05:0,48,539	0/0:16,0:14:33.09:0,33,391	0/0:13,0:13:29.88:0,30,145	1/1:0,14:15:18.02:273,18,0	1/1:2,5:7:7.16:243,7,0	0/0:31,0:31:78.12:0,78,906	1/1:1,7:8:15.05:254,15,0	1/1:3,12:15:36.12:604,36,0	1/1:0,7:7:21.07:355,21,0	0/0:9,0:9:27.05:0,27,303	0/0:11,0:11:30.07:0,30,352	0/0:7,0:7:21.07:0,21,256	1/1:2,8:10:19.19:421,19,0	0/0:6,0:6:15.05:0,15,182	0/0:36,0:36:84.14:0,84,992	0/0:26,0:26:66.09:0,66,737	1/1:4,17:21:45.75:649,46,0	1/1:0,8:9:24.08:406,24,0	1/1:0,6:6:18.06:304,18,0	0/0:8,0:8:24.03:0,24,256	0/0:6,0:6:18.04:0,18,207	0/0:9,0:9:24.03:0,24,254	1/1:1,10:11:27.09:457,27,0	1/1:1,17:18:47.46:661,47,0	1/1:1,6:7:18.06:304,18,0	1/1:4,21:25:60.23:1129,60,0
chr10	55804204	.	A	AGTCTG	6111.29	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-0.656;DP=661;FS=15.351;HRun=0;HaplotypeScore=183.9741;InbreedingCoeff=0.9995;MQ=73.85;MQ0=0;MQRankSum=-11.893;QD=79.37;ReadPosRankSum=-3.868;VQSLOD=3.9396;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,17:25:57.18:1812,57,0	0/0:9,0:9:27.08:0,27,586	0/0:17,0:16:48.12:0,48,961	0/0:14,0:13:33.09:0,33,658	1/1:3,20:23:59.77:1881,60,0	0/0:30,0:30:84.29:0,84,1957	0/0:15,0:15:41.94:0,42,977	1/1:13,16:29:81.26:2418,81,0	0/0:19,0:19:54.18:0,54,1192	0/0:28,0:28:80.90:0,81,1844	0/0:34,0:34:99:0,99,2210	0/0:28,0:28:81.26:0,81,1798	0/0:25,0:25:75.26:0,75,1747	0/0:24,0:24:72.23:0,72,1590	0/0:23,0:23:69.24:0,69,1608	0/0:32,0:32:90.30:0,90,2009	0/0:25,0:25:75.24:0,75,1682	0/0:15,0:15:42.14:0,42,958	0/0:31,0:31:87.28:0,87,1913	0/0:33,0:33:99:0,99,2246	0/0:25,0:25:72.16:0,72,1481	0/0:17,0:17:51.18:0,51,1171	0/0:19,0:19:57.18:0,57,1264	0/0:16,0:15:45.15:0,45,1024	0/0:24,0:24:69.22:0,69,1521	0/0:25,0:25:72.24:0,72,1634	0/0:34,0:34:99:0,102,2349	0/0:22,0:22:63.22:0,63,1460
chr10	55804220	.	C	CA	22155	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-8.919;DP=640;FS=17.078;HRun=2;HaplotypeScore=73.6149;InbreedingCoeff=0.9995;MQ=74.41;MQ0=0;MQRankSum=-5.781;QD=38.94;ReadPosRankSum=1.759;VQSLOD=3.2737;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,21:24:60.20:863,60,0	1/1:0,10:10:30.10:432,30,0	0/0:14,0:14:39.11:0,39,471	0/0:11,0:11:30.06:0,30,346	1/1:4,20:24:60.16:838,60,0	1/1:1,36:37:96.32:1383,96,0	1/1:0,18:18:47.95:691,48,0	1/1:5,31:35:93.30:1320,93,0	1/1:2,17:19:48.16:691,48,0	1/1:0,23:23:66.10:950,66,0	1/1:0,32:32:96.32:1382,96,0	1/1:2,24:26:69.23:994,69,0	0/0:26,0:26:75.24:0,75,929	0/0:20,0:20:57.18:0,57,706	1/1:1,25:26:72.24:1037,72,0	1/1:0,28:28:75.25:1080,75,0	1/1:1,24:25:60.20:864,60,0	1/1:0,12:12:33.11:475,33,0	1/1:2,25:28:78.25:1098,78,0	1/1:1,32:33:93.27:1316,93,0	1/1:0,23:23:63.21:907,63,0	1/1:0,16:16:45.15:648,45,0	1/1:1,19:20:51.17:734,51,0	1/1:0,10:10:30.10:432,30,0	1/1:1,19:20:54.18:778,54,0	1/1:1,24:25:69.23:994,69,0	1/1:1,31:32:93.31:1339,93,0	1/1:0,22:22:63.21:907,63,0
chr10	55806977	.	T	TA	1311.15	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-5.914;DP=608;FS=0.000;HRun=10;HaplotypeScore=90.6569;InbreedingCoeff=0.9743;MQ=62.39;MQ0=1;MQRankSum=-2.636;QD=14.25;ReadPosRankSum=-2.522;VQSLOD=3.2824;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,25:31:66.17:703,66,0	0/0:11,0:11:26.97:0,27,222	0/0:14,0:10:20.85:0,21,163	0/0:9,0:8:11.93:0,12,97	1/1:3,18:21:39.02:391,39,0	0/0:25,0:25:65.92:0,66,541	0/0:9,0:9:23.94:0,24,193	1/1:12,1:35:62.56:360,63,0	0/0:19,0:19:44.91:0,45,354	0/0:25,0:25:65.88:0,66,534	0/0:16,0:16:41.55:0,42,329	0/0:26,0:27:67.94:0,68,543	0/0:16,0:16:47.95:0,48,394	0/0:21,0:21:53.94:0,54,443	0/0:31,0:31:71.87:0,72,586	0/0:33,0:34:73.88:0,74,591	0/0:19,0:20:43.96:0,44,347	0/0:20,0:20:50.92:0,51,416	0/0:14,0:13:35.94:0,36,293	0/0:47,0:48:99:0,131,1057	0/0:7,0:7:11.97:0,12,98	0/0:12,0:12:32.96:0,33,271	0/0:14,0:14:38.93:0,39,317	0/0:19,0:19:29.90:0,30,240	0/0:20,0:20:56.17:0,56,438	0/0:29,0:29:68.91:0,69,566	0/0:48,0:48:99:0,112,1034	0/0:8,0:8:23.91:0,24,188
chr10	55808235	.	CGG	C	3334.69	PASS	AB=1.000;AC=47;AF=0.979;AN=48;BaseQRankSum=-0.715;DP=432;FS=4.058;HRun=2;HaplotypeScore=160.9809;InbreedingCoeff=0.1157;MQ=34.33;MQ0=11;MQRankSum=-0.157;QD=8.27;ReadPosRankSum=-1.005;VQSLOD=0.1163;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:3,18:18:6.01:67,6,0	1/1:6,0:6:3.01:39,3,0	./.	./.	1/1:3,18:18:5.40:65,5,0	1/1:14,1:15:6.47:67,6,0	1/1:11,1:12:12.25:152,12,0	1/1:1,10:7:21.07:305,21,0	1/1:19,2:21:13.33:134,13,0	1/1:11,0:11:17.25:151,17,0	./.	1/1:16,18:32:47.69:601,48,0	1/1:16,2:17:13.51:105,14,0	1/1:22,4:24:18.84:125,19,0	1/1:27,3:29:20.44:283,20,0	1/1:11,10:20:26.21:303,26,0	1/1:9,3:10:8.31:87,8,0	1/1:9,0:8:16.97:172,17,0	1/1:10,0:9:16.13:97,16,0	1/1:17,1:15:3.28:46,3,0	1/1:15,2:17:3.48:40,3,0	1/1:6,6:10:6.02:89,6,0	./.	0/1:13,0:12:0:0,0,0	1/1:19,0:18:6.02:92,6,0	1/1:16,2:16:27.23:195,27,0	1/1:18,1:17:15.27:99,15,0	1/1:9,0:9:6.28:21,6,0
chr10	55808257	.	GCA	G	335.49	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=1.087;DP=441;FS=10.892;HRun=0;HaplotypeScore=189.8939;InbreedingCoeff=0.2528;MQ=38.20;MQ0=1;MQRankSum=-2.512;QD=1.76;ReadPosRankSum=-2.661;VQSLOD=1.1008;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:14:8.85:57,9,0	0/1:7,0:7:0:0,0,0	0/1:10,0:2:6.10:6,0,20	0/1:7,0:3:27.66:28,0,40	0/1:16,0:13:0.11:0,0,1	0/1:20,0:20:15.88:16,0,88	0/1:9,0:9:8.17:8,0,52	1/1:12,4:12:35.16:272,35,0	0/0:21,0:21:1.70:0,2,102	0/0:12,0:12:22.29:0,22,302	0/0:17,0:16:3:0,3,28	1/1:22,0:20:2.79:43,3,0	0/0:20,0:19:18.03:0,18,639	0/0:29,0:27:6.94:0,7,538	0/0:26,1:26:7.43:0,7,57	0/1:14,0:13:8.42:11,0,8	0/0:12,0:10:6.70:0,7,19	1/1:4,0:3:5.42:26,5,0	0/0:16,0:16:30.36:0,30,336	0/0:23,0:20:1.63:0,2,57	0/0:18,0:18:13.54:0,14,130	1/1:13,1:13:3.58:9,4,0	0/0:12,0:11:6.11:0,6,18	0/0:11,0:11:1.79:0,2,6	0/1:16,0:16:0.01:0,0,0	0/0:23,0:21:12.94:0,13,395	0/1:22,0:21:7.79:8,0,146	0/0:9,0:9:17.92:0,18,147
chr10	55808258	.	C	CGTGT	887.58	PASS	AB=0.874;AC=30;AF=0.536;AN=56;BaseQRankSum=0.027;DP=448;FS=3.846;HRun=0;HaplotypeScore=197.3577;InbreedingCoeff=0.3294;MQ=38.47;MQ0=1;MQRankSum=-0.367;QD=3.06;ReadPosRankSum=-2.596;VQSLOD=2.4524;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:14:8.80:62,9,0	0/1:7,0:7:0:0,0,0	0/1:12,0:2:19.29:19,0,21	0/1:7,0:4:17.78:18,0,65	1/1:16,0:13:0.25:1,0,0	1/1:21,0:21:9.37:59,9,0	0/0:9,0:9:3.85:0,4,37	0/1:16,0:12:19.07:19,0,119	0/0:19,0:21:5.12:0,5,59	0/0:12,0:12:12.85:0,13,145	0/0:17,0:16:0.47:0,0,1	0/1:14,3:20:11.32:245,0,11	0/0:19,0:19:28.23:0,28,406	0/0:26,0:28:21.41:0,21,375	1/1:26,0:26:0.13:1,0,0	1/1:11,3:13:12.03:166,12,0	1/1:3,8:10:9.03:175,9,0	1/1:1,2:3:6.02:105,6,0	0/0:16,0:16:4.33:0,4,172	1/1:23,0:20:1.79:11,2,0	0/1:18,0:18:1.66:2,0,19	1/1:12,0:13:9.03:149,9,0	0/1:2,8:12:0:0,0,0	0/1:0,10:11:0.41:0,0,0	1/1:16,0:16:0.47:1,0,0	0/0:21,0:21:9.26:0,9,115	1/1:22,0:21:0.89:5,1,0	0/0:10,0:10:10.44:0,10,103
chr10	55808259	.	A	ATG	3722.80	PASS	AB=0.843;AC=38;AF=0.704;AN=54;BaseQRankSum=-3.175;DP=457;FS=14.264;HRun=0;HaplotypeScore=183.7951;InbreedingCoeff=0.2645;MQ=39.59;MQ0=1;MQRankSum=-2.288;QD=9.80;ReadPosRankSum=0.473;VQSLOD=2.4143;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:14:8.80:101,9,0	./.	0/0:11,0:2:3.26:0,3,10	0/0:9,0:5:2.97:0,3,30	1/1:16,0:13:0.06:1,0,0	1/1:8,13:22:20.16:305,20,0	0/1:5,5:10:14.87:42,0,15	0/1:16,0:12:24.32:51,0,24	0/1:9,12:22:23.68:157,0,24	1/1:5,9:14:7.93:334,8,0	1/1:4,12:15:3.01:48,3,0	0/1:22,0:20:3.64:91,0,4	0/0:19,0:19:36.69:0,37,267	0/0:27,0:27:34.89:0,35,267	1/1:10,15:24:14.86:239,15,0	1/1:14,0:13:11.61:84,12,0	1/1:12,0:10:8.89:63,9,0	1/1:4,0:3:5.81:52,6,0	0/1:12,4:16:7.23:218,0,7	1/1:6,20:23:12.04:192,12,0	0/1:9,11:20:6.80:178,0,7	1/1:15,0:14:9:81,9,0	0/1:13,0:12:0:0,0,0	0/1:12,0:12:0.04:0,0,0	1/1:4,12:16:3.01:48,3,0	1/1:5,17:22:43.77:773,44,0	1/1:5,16:20:33.11:520,33,0	1/1:3,7:10:9.97:146,10,0
chr10	55808260	.	A	AGT	4698.05	PASS	AB=1.000;AC=41;AF=0.759;AN=54;BaseQRankSum=-2.736;DP=534;FS=2.793;HRun=0;HaplotypeScore=219.0061;InbreedingCoeff=0.4296;MQ=38.48;MQ0=1;MQRankSum=-4.274;QD=10.28;ReadPosRankSum=-1.377;VQSLOD=4.5670;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:19:8.72:101,9,0	./.	0/0:12,0:2:5.72:0,6,28	0/0:9,0:5:3.78:0,4,31	1/1:17,0:14:0.06:1,0,0	1/1:25,0:25:18.06:287,18,0	0/1:11,0:11:14.72:63,0,15	1/1:25,0:21:44.90:317,45,0	0/1:29,0:29:17.28:326,0,17	1/1:17,0:17:12.23:454,12,0	1/1:18,0:17:3.01:48,3,0	1/1:28,0:26:16.85:112,17,0	0/0:20,0:19:32.35:0,32,276	0/0:29,0:27:35.20:0,35,288	1/1:26,0:25:15.47:241,15,0	1/1:22,0:21:20.18:126,20,0	1/1:14,0:12:14.84:120,15,0	1/1:7,0:6:8.92:76,9,0	0/1:18,0:18:3.50:310,0,3	1/1:30,0:27:15.04:217,15,0	0/1:23,0:23:3.35:219,0,3	1/1:19,0:18:12.01:113,12,0	0/1:14,0:13:0:0,0,0	1/1:20,0:20:5.95:51,6,0	1/1:18,0:18:3.01:48,3,0	1/1:24,0:22:51.17:798,51,0	1/1:23,0:22:33.11:526,33,0	1/1:10,0:10:9.03:144,9,0
chr10	55809342	.	CA	C	1084.89	PASS	AB=0.740;AC=32;AF=0.571;AN=56;BaseQRankSum=-3.023;DP=586;FS=1.701;HRun=16;HaplotypeScore=90.1136;InbreedingCoeff=0.6087;MQ=79.86;MQ0=2;MQRankSum=2.214;QD=3.01;ReadPosRankSum=6.898;VQSLOD=0.0823;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,1:33:35.45:112,35,0	1/1:6,6:13:16.24:93,16,0	0/1:29,0:22:17.13:17,0,75	0/0:17,0:14:2.94:0,3,19	1/1:9,1:20:14.06:40,14,0	1/1:10,5:15:11.53:72,12,0	1/1:8,5:15:9.02:46,9,0	1/1:16,14:32:33.41:193,33,0	1/1:13,0:13:2.39:17,2,0	1/1:8,7:15:20.37:124,20,0	1/1:14,4:19:7.35:52,7,0	0/0:26,0:26:63.72:0,64,357	0/0:21,0:21:28.04:0,28,202	0/0:25,0:25:48.92:0,49,354	0/1:21,12:33:4.25:85,0,4	0/0:13,0:35:23.09:0,23,126	0/0:25,0:24:41.04:0,41,207	0/0:14,0:14:23.80:0,24,124	1/1:8,3:10:8.71:54,9,0	1/1:11,6:17:5.45:35,5,0	1/1:6,8:15:15.51:83,16,0	0/0:20,0:20:27.27:0,27,170	0/0:9,0:21:18.84:0,19,94	0/0:9,0:21:8.58:0,9,48	0/1:5,10:17:14.83:87,0,15	1/1:12,4:17:9.47:56,9,0	1/1:19,12:31:16.13:95,16,0	0/1:5,8:13:16.43:27,0,16
chr10	55809634	.	G	GGA	2234.19	PASS	AB=0.605;AC=21;AF=0.375;AN=56;BaseQRankSum=10.785;DP=646;FS=18.768;HRun=0;HaplotypeScore=127.5481;InbreedingCoeff=-0.2905;MQ=60.15;MQ0=1;MQRankSum=-3.746;QD=5.04;ReadPosRankSum=-4.855;VQSLOD=0.1506;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:14,1:39:78.14:78,0,157	0/1:7,0:15:47.20:47,0,107	0/0:16,0:9:16.91:0,17,199	0/0:11,0:10:11.45:0,11,127	0/1:7,0:24:98.88:128,0,99	0/1:3,0:11:29.82:30,0,35	0/1:11,0:23:42.62:43,0,177	1/1:13,3:41:99:1037,101,0	0/1:9,0:23:52.20:52,0,64	0/1:12,0:22:99:102,0,138	0/1:4,0:18:42.26:119,0,42	0/0:10,0:27:25.66:0,26,322	0/0:18,0:22:60:0,60,734	0/0:16,0:19:50.34:0,50,613	0/1:11,0:40:99:107,0,104	0/0:9,0:32:43.39:0,43,400	0/0:10,0:35:61.28:0,61,321	0/0:8,0:17:15.72:0,16,284	0/1:8,0:17:55.81:140,0,56	0/1:9,0:25:53.89:147,0,54	0/1:5,0:24:46.01:53,0,46	0/1:4,0:22:36.13:36,0,170	0/1:2,0:13:1.24:1,0,40	0/0:7,0:23:20.89:0,21,294	0/1:5,0:15:28.27:28,0,85	0/1:10,0:22:92.86:93,0,115	0/1:12,0:34:99:110,0,159	1/1:1,0:12:9.15:54,9,0
chr10	55810199	.	CACACACACACACAT	C	4039.49	PASS	AB=1.000;AC=26;AF=0.464;AN=56;BaseQRankSum=6.120;DP=699;FS=0.929;HRun=0;HaplotypeScore=260.8849;InbreedingCoeff=0.6043;MQ=58.91;MQ0=24;MQRankSum=-5.028;QD=12.54;ReadPosRankSum=-2.092;VQSLOD=1.8037;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:9.48:0,9,389	0/0:7,0:7:9.92:0,10,414	0/0:52,0:18:2.46:0,2,84	0/1:62,0:29:18.83:19,0,164	0/1:14,0:14:3.89:4,0,768	1/1:17,1:18:21.07:464,21,0	1/1:18,1:19:6.02:158,6,0	0/0:35,0:33:58.59:0,59,790	1/1:26,2:28:26.67:680,27,0	0/1:18,0:17:25.57:232,0,26	1/1:15,0:15:3.01:48,3,0	0/1:29,0:29:4.26:4,0,500	0/0:26,0:26:58:0,58,2480	0/0:26,0:26:51.04:0,51,1875	1/1:25,1:26:27.09:659,27,0	0/0:46,0:45:62.83:0,63,823	0/0:23,0:23:8.18:0,8,381	0/0:17,0:17:29.97:0,30,487	1/1:15,1:15:9.63:316,10,0	1/1:18,1:19:18.06:402,18,0	1/1:18,0:18:8.13:197,8,0	0/0:35,0:35:15.10:0,15,786	0/0:16,0:16:20.75:0,21,246	0/0:30,0:30:43.67:0,44,608	0/0:25,0:24:15.05:0,15,416	1/1:12,0:12:8.15:153,8,0	1/1:19,1:20:6.96:581,7,0	1/1:8,0:8:6.02:122,6,0
chr10	55810201	.	CACACACACACAT	C	5982.58	PASS	AB=0.992;AC=28;AF=0.500;AN=56;BaseQRankSum=5.745;DP=699;FS=1.960;HRun=0;HaplotypeScore=230.5687;InbreedingCoeff=0.5975;MQ=58.53;MQ0=24;MQRankSum=-5.713;QD=16.66;ReadPosRankSum=-2.791;VQSLOD=3.0854;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:9.48:0,9,310	0/0:6,0:6:9.50:0,10,338	0/0:51,0:17:2.46:0,2,84	0/1:60,0:27:18.83:19,0,164	0/1:14,0:14:3.89:4,0,611	1/1:1,16:17:21.07:701,21,0	1/1:24,0:24:6.02:134,6,0	0/0:35,0:33:42.06:0,42,634	1/1:6,22:28:26.48:929,26,0	1/1:16,2:17:35.70:437,36,0	1/1:0,15:15:3.01:93,3,0	0/1:28,1:29:99:119,0,216	0/0:27,0:27:61.01:0,61,2258	0/0:26,0:26:51.04:0,51,1649	1/1:6,19:25:27.09:928,27,0	0/0:47,0:46:1.33:0,1,370	0/0:23,0:23:8.18:0,8,309	0/0:17,0:17:21.31:0,21,286	1/1:7,10:16:28.82:413,29,0	1/1:5,14:19:18.06:594,18,0	1/1:18,0:18:26.89:279,27,0	0/1:35,0:35:67.40:67,0,454	0/0:16,0:16:19.21:0,19,182	0/0:30,0:30:37.01:0,37,476	0/0:25,0:24:15.01:0,15,285	1/1:12,0:12:24.88:196,25,0	1/1:15,5:20:44.82:859,45,0	1/1:1,7:8:6.02:211,6,0
chr10	55810203	.	CACACACACAT	C	5422.16	PASS	AB=1.000;AC=31;AF=0.554;AN=56;BaseQRankSum=11.077;DP=704;FS=0.000;HRun=0;HaplotypeScore=212.3229;InbreedingCoeff=0.3556;MQ=58.09;MQ0=24;MQRankSum=-8.684;QD=11.81;ReadPosRankSum=0.166;VQSLOD=3.5747;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:9.48:0,9,232	0/0:7,0:7:9.50:0,10,263	0/0:49,0:15:2.46:0,2,84	0/1:60,0:27:18.83:19,0,164	0/1:14,0:14:0.93:1,0,471	1/1:18,0:18:24.08:530,24,0	1/1:7,17:24:6.02:165,6,0	0/1:35,0:33:22.73:23,0,492	1/1:28,0:28:26.47:671,26,0	1/1:17,0:16:6.30:307,6,0	1/1:15,0:15:3.01:60,3,0	0/1:30,0:30:99:396,0,130	0/0:28,0:28:64.01:0,64,1963	0/0:26,0:26:51.03:0,51,1414	1/1:25,0:25:27.09:669,27,0	0/1:46,0:45:99:236,0,263	0/0:23,0:23:7.77:0,8,221	0/1:17,0:17:58.38:58,0,128	1/1:17,0:16:28.94:335,29,0	1/1:19,0:19:18.06:416,18,0	1/1:19,0:19:26.53:245,27,0	0/1:36,0:36:99:308,0,274	0/0:16,0:16:0.46:0,0,124	0/0:30,0:30:10.16:0,10,355	0/0:26,0:25:7.19:0,7,154	1/1:12,0:12:24.88:195,25,0	1/1:20,0:20:44.53:643,45,0	1/1:7,0:7:6.02:146,6,0
chr10	55810209	.	CACAT	C	3580.71	PASS	AB=1.000;AC=39;AF=0.696;AN=56;BaseQRankSum=10.534;DP=676;FS=14.245;HRun=0;HaplotypeScore=156.8951;InbreedingCoeff=0.0187;MQ=55.48;MQ0=24;MQRankSum=-6.404;QD=6.17;ReadPosRankSum=0.580;VQSLOD=1.7517;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:37,0:37:1.18:4,1,0	0/1:9,0:9:24.58:25,0,40	0/0:45,0:12:2.24:0,2,83	0/1:54,0:21:19.30:19,0,164	0/1:13,0:13:26.78:139,0,27	1/1:18,0:18:22.28:222,22,0	1/1:19,0:19:6.01:63,6,0	0/1:34,0:32:5.29:5,0,503	1/1:25,0:25:26.94:295,27,0	1/1:17,0:16:38.38:318,38,0	1/1:15,0:15:2.98:21,3,0	0/1:30,0:30:99:182,0,119	0/0:26,0:26:25.50:0,26,920	0/0:25,0:25:62.96:0,63,894	1/1:23,0:23:30.07:320,30,0	0/1:47,0:46:99:118,0,285	0/1:26,0:26:99:117,0,158	0/1:17,0:17:37.46:37,0,73	1/1:14,0:13:29.21:215,29,0	1/1:16,0:16:17.98:182,18,0	1/1:18,0:18:29.40:218,29,0	0/1:37,0:37:99:105,0,199	0/1:14,0:14:8.53:9,0,85	0/1:29,0:29:32.65:33,0,302	1/1:5,22:26:12.51:195,13,0	1/1:15,0:15:35.70:295,36,0	1/1:18,0:19:40.84:383,41,0	1/1:7,0:7:6.01:62,6,0
chr10	55810211	.	CAT	C	2749.66	PASS	AB=0.997;AC=37;AF=0.661;AN=56;BaseQRankSum=6.168;DP=672;FS=18.435;HRun=0;HaplotypeScore=142.2796;InbreedingCoeff=0.3150;MQ=54.28;MQ0=26;MQRankSum=-3.383;QD=5.50;ReadPosRankSum=-2.921;VQSLOD=1.5013;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:2,35:37:9.03:137,9,0	0/0:9,0:9:4.99:0,5,47	0/0:44,0:11:1.98:0,2,82	0/1:51,0:19:19.29:19,0,164	1/1:10,3:13:9.97:283,10,0	1/1:18,0:18:23.65:154,24,0	1/1:19,0:19:5.95:52,6,0	0/1:33,0:31:4.72:5,0,524	1/1:25,0:25:26.58:169,27,0	1/1:16,0:15:18.22:261,18,0	1/1:15,0:15:1.55:4,2,0	0/1:29,0:29:35.04:35,0,151	0/1:27,0:27:34.34:34,0,561	0/0:23,0:23:46:0,46,713	1/1:22,0:22:29.55:191,30,0	0/0:47,0:46:8.86:0,9,339	0/1:26,0:26:99:129,0,156	0/1:16,0:16:2.86:3,0,95	1/1:13,0:12:29:174,29,0	1/1:16,0:16:17.71:112,18,0	1/1:20,0:20:35.61:263,36,0	0/0:36,0:36:5.87:0,6,232	0/0:13,0:13:2.18:0,2,91	0/1:30,0:30:59.17:59,0,314	1/1:25,1:25:14.73:129,15,0	1/1:9,8:16:38.60:321,39,0	1/1:21,0:21:46.08:358,46,0	1/1:8,0:7:5.83:34,6,0
chr10	55810213	.	TACACACAC	T	6222.32	PASS	AB=1.000;AC=35;AF=0.648;AN=54;BaseQRankSum=7.512;DP=686;FS=1.181;HRun=0;HaplotypeScore=180.6755;InbreedingCoeff=0.3376;MQ=53.01;MQ0=26;MQRankSum=-8.568;QD=12.86;ReadPosRankSum=2.319;VQSLOD=3.8906;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:9.03:0,9,225	0/0:4,0:9:9.49:0,9,161	./.	0/0:51,0:18:0.47:0,0,1	0/0:13,0:13:18.60:0,19,483	1/1:18,0:18:23.22:335,23,0	1/1:20,0:20:6.02:99,6,0	1/1:35,0:33:17.95:119,18,0	1/1:26,0:26:26.53:465,27,0	0/1:18,0:17:41.25:92,0,41	1/1:15,0:15:3.01:37,3,0	1/1:11,15:27:44.90:1000,45,0	0/0:24,0:26:54.18:0,54,1717	0/0:24,0:24:45.14:0,45,1278	1/1:24,0:24:5.86:440,6,0	1/1:17,29:47:42.31:1007,42,0	1/1:26,0:26:26.53:303,27,0	1/1:7,9:16:13.86:311,14,0	0/1:15,0:14:48.02:131,0,48	0/1:17,0:17:3.95:257,0,4	1/1:23,0:23:2.12:32,2,0	1/1:12,18:33:32.49:725,32,0	1/1:5,7:12:6.02:109,6,0	1/1:31,1:33:23.24:368,23,0	0/1:27,0:26:20.43:20,0,161	0/1:19,0:18:1.91:2,0,38	0/1:23,0:23:53.94:282,0,54	0/1:10,0:9:13.95:89,0,14
chr10	55811090	.	A	AT	13537.81	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=9.659;DP=739;FS=7.305;HRun=2;HaplotypeScore=87.8778;InbreedingCoeff=0.9996;MQ=77.21;MQ0=0;MQRankSum=-2.635;QD=38.57;ReadPosRankSum=1.818;VQSLOD=5.1717;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:72.23:0,72,892	0/0:16,0:16:48.15:0,48,594	0/0:17,0:17:41.58:0,42,440	0/0:13,0:13:32.67:0,33,343	0/0:29,0:29:81.21:0,81,965	1/1:0,23:23:63.21:907,63,0	1/1:1,36:37:99:1512,105,0	0/0:36,0:36:99:0,102,1233	1/1:2,20:22:48.15:674,48,0	1/1:1,47:48:99:2025,141,0	1/1:0,11:11:30.10:432,30,0	0/0:37,0:37:99:0,108,1326	0/0:27,0:27:78.24:0,78,963	0/0:29,0:29:87.24:0,87,1053	1/1:2,46:47:99:1771,123,0	0/0:32,0:32:93.25:0,93,1115	0/0:24,0:24:66.19:0,66,803	0/0:27,0:27:81.22:0,81,987	1/1:3,20:23:60.20:864,60,0	1/1:1,30:32:87.20:1205,87,0	1/1:2,20:22:51.17:734,51,0	0/0:31,0:31:90.26:0,90,1101	0/0:16,0:16:48.15:0,48,595	0/0:30,0:30:90.26:0,90,1101	1/1:0,20:20:57.19:821,57,0	1/1:1,21:22:63.21:907,63,0	1/1:0,34:33:93.31:1338,93,0	1/1:1,8:9:24.08:346,24,0
chr10	55811574	.	C	CT	3165.85	PASS	AB=0.769;AC=26;AF=0.464;AN=56;BaseQRankSum=-9.051;DP=596;FS=3.987;HRun=13;HaplotypeScore=72.9298;InbreedingCoeff=0.5456;MQ=68.75;MQ0=3;MQRankSum=1.041;QD=9.71;ReadPosRankSum=-1.024;VQSLOD=2.8928;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,1:28:6.84:0,7,334	0/0:4,0:4:8.89:0,9,62	0/1:22,1:17:18.82:29,0,19	0/0:9,0:9:4.37:0,4,19	0/0:23,1:28:35.35:0,35,362	1/1:4,12:16:12.45:258,12,0	0/1:5,11:17:19.94:226,0,20	0/0:42,0:42:91.73:0,92,622	1/1:2,10:14:9.12:203,9,0	1/1:8,20:28:36.93:476,37,0	1/1:7,17:25:8.39:178,8,0	0/0:21,0:22:49.58:0,50,333	0/0:22,0:23:55.50:0,55,373	0/0:25,0:25:53.36:0,53,365	1/1:10,21:31:6.89:349,7,0	0/0:23,2:25:22.68:0,23,299	0/0:6,0:24:31.86:0,32,93	0/0:7,0:25:40.29:0,40,139	1/1:4,10:14:20.99:187,21,0	1/1:8,20:30:51.13:423,51,0	0/1:9,11:21:31.20:127,0,31	0/0:15,0:15:35.28:0,35,235	0/1:20,2:22:7.21:7,0,220	0/1:11,1:13:2.07:2,0,124	1/1:5,6:11:12.48:112,12,0	1/1:9,17:28:48.85:438,49,0	0/1:7,15:24:5.45:213,0,5	1/1:1,8:9:15.02:139,15,0
chr10	55812704	.	T	TAGC	1823.28	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-7.563;DP=662;FS=6.822;HRun=0;HaplotypeScore=110.8686;InbreedingCoeff=0.9143;MQ=68.30;MQ0=0;MQRankSum=-2.677;QD=29.89;ReadPosRankSum=1.203;VQSLOD=3.9795;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,26:29:51.18:1070,51,0	0/0:7,0:7:21.07:0,21,321	0/0:23,0:23:57:0,57,789	0/0:21,0:21:44.16:0,44,556	1/1:7,24:31:45.15:874,45,0	0/0:21,0:21:57.18:0,57,855	0/0:10,0:10:27.08:0,27,394	0/0:32,0:32:72.23:0,72,1085	0/0:20,0:20:57.14:0,57,831	0/0:20,0:20:51.16:0,51,749	0/0:27,0:27:57.18:0,57,860	0/0:30,0:30:81.18:0,81,1197	0/0:24,0:24:66.14:0,66,885	0/0:32,0:32:87.28:0,87,1306	0/0:31,0:31:75.24:0,75,1134	0/0:31,0:31:84.25:0,84,1252	0/0:25,0:25:60.18:0,60,900	0/0:21,0:21:60.18:0,60,899	0/0:18,0:18:51.13:0,51,722	0/0:29,0:29:66.20:0,66,975	0/0:23,0:23:57.16:0,57,837	0/0:29,0:29:75.19:0,75,1088	0/0:20,0:20:48.15:0,48,719	0/0:23,0:23:57.11:0,57,788	0/0:20,0:20:57.13:0,57,813	0/0:23,0:23:60.18:0,60,869	0/0:40,0:40:96.11:0,96,1378	0/0:1,0:1:3.01:0,3,46
chr10	55816280	.	AT	A	6490.70	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=14.127;DP=760;FS=3.286;HRun=1;HaplotypeScore=71.1278;InbreedingCoeff=0.9997;MQ=81.10;MQ0=0;MQRankSum=-6.058;QD=38.64;ReadPosRankSum=3.484;VQSLOD=5.6289;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:90.31:0,90,1439	0/0:10,0:10:30.10:0,30,480	0/0:26,0:26:75.22:0,75,1132	0/0:12,0:12:35.95:0,36,518	0/0:23,0:23:66.22:0,66,1047	0/0:30,0:30:90.29:0,90,1405	0/0:21,0:21:63.20:0,63,962	0/0:39,0:39:99:0,117,1842	0/0:29,0:29:87.28:0,87,1359	0/0:40,0:40:99:0,120,1889	0/0:33,0:33:96.33:0,96,1534	1/1:0,27:27:78.26:1080,78,0	0/0:41,0:41:99:0,123,1863	0/0:23,1:24:30.28:0,30,1061	0/0:44,0:44:99:0,132,2103	1/1:0,47:47:99:1846,132,0	1/1:0,24:24:66.22:921,66,0	1/1:0,19:19:51.17:713,51,0	0/0:22,0:22:66.22:0,66,1047	0/0:28,0:28:84.27:0,84,1311	0/0:21,0:21:63.17:0,63,971	1/1:0,13:13:33.11:462,33,0	1/1:0,19:19:54.18:755,54,0	1/1:0,19:19:51.17:713,51,0	0/0:20,0:20:60.19:0,60,924	0/0:36,0:36:99:0,105,1670	0/0:46,0:46:99:0,138,2181	0/0:16,0:16:48.16:0,48,741
chr10	55816562	.	T	TA	910.92	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=-7.750;DP=538;FS=8.320;HRun=9;HaplotypeScore=93.6239;InbreedingCoeff=0.3935;MQ=68.24;MQ0=2;MQRankSum=0.022;QD=12.15;ReadPosRankSum=-7.060;VQSLOD=0.9339;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:62.97:0,63,544	0/0:12,0:12:32.98:0,33,284	0/0:14,0:13:11.31:0,11,165	0/1:10,0:8:2.71:3,0,20	0/0:22,0:22:50.95:0,51,440	0/0:17,0:17:39.87:0,40,164	0/0:9,0:9:21.84:0,22,97	1/1:10,32:42:79.19:1000,79,0	0/0:5,0:5:13.72:0,14,61	0/0:22,0:22:36.17:0,36,129	0/0:27,0:27:63.06:0,63,265	0/0:24,0:23:32.65:0,33,87	0/0:19,0:19:41.96:0,42,360	0/0:18,1:19:20.74:0,21,398	0/0:20,0:20:48.52:0,49,212	0/0:19,0:19:23.32:0,23,62	0/0:33,0:33:41.98:0,42,111	0/0:18,0:18:22.25:0,22,60	0/0:18,0:18:17.34:0,17,127	0/0:23,0:23:12.89:0,13,146	0/1:8,0:8:2.76:3,0,55	0/0:11,0:11:10.86:0,11,29	0/0:19,0:19:25.35:0,25,68	0/0:20,0:20:24.88:0,25,66	0/1:15,0:15:12.89:13,0,93	0/0:18,0:18:39.51:0,40,153	0/0:29,0:29:38.65:0,39,231	0/0:19,0:19:35.12:0,35,152
chr10	55816570	.	AAT	A	4961.62	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-5.729;DP=532;FS=23.804;HRun=0;HaplotypeScore=88.6691;InbreedingCoeff=0.9874;MQ=67.52;MQ0=3;MQRankSum=0.278;QD=34.22;ReadPosRankSum=4.371;VQSLOD=4.5209;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:72.19:0,72,1179	0/0:14,0:14:42.12:0,42,677	0/0:15,0:13:9.77:0,10,439	0/0:13,0:9:18:0,18,188	0/0:23,0:23:66.18:0,66,1085	0/0:17,0:17:51.16:0,51,869	0/0:10,0:10:27.08:0,27,447	0/0:38,0:39:99:0,110,1220	0/0:6,0:6:18.03:0,18,279	0/0:20,0:20:57.15:0,57,943	0/0:29,0:29:84.19:0,84,1359	1/1:0,22:21:63.21:896,63,0	0/0:15,0:15:45.14:0,45,756	0/0:18,0:18:54.15:0,54,898	0/0:21,0:21:60.18:0,60,1000	1/1:0,22:22:45.15:641,45,0	1/1:1,33:34:81.27:1153,81,0	1/1:1,17:18:42.10:575,42,0	0/0:18,0:18:54.17:0,54,891	0/0:19,0:19:51.15:0,51,826	0/0:10,0:10:27.07:0,27,435	1/1:1,10:11:26.26:325,26,0	1/1:1,17:18:51.09:680,51,0	1/1:1,19:20:50.66:691,51,0	0/0:16,0:16:45.12:0,45,722	0/0:18,0:18:54.16:0,54,896	0/0:27,0:27:75.23:0,75,1268	0/0:13,0:13:39.13:0,39,666
chr10	55817608	.	G	GAA	13742.30	PASS	AB=0.833;AC=43;AF=0.768;AN=56;BaseQRankSum=14.555;DP=617;FS=0.000;HRun=4;HaplotypeScore=204.6134;InbreedingCoeff=0.8958;MQ=64.22;MQ0=2;MQRankSum=-10.384;QD=29.94;ReadPosRankSum=-0.428;VQSLOD=3.0066;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:66.21:0,66,879	0/1:8,0:10:18.88:19,0,204	0/0:23,0:17:45.14:0,45,572	0/0:34,0:23:30.83:0,31,581	0/0:26,0:26:69.22:0,69,920	1/1:8,10:18:45.05:681,45,0	1/1:9,8:17:48.04:655,48,0	1/1:19,8:27:81.27:1214,81,0	1/1:9,12:21:60.19:929,60,0	1/1:18,12:30:74.96:1011,75,0	1/1:10,12:22:63.10:917,63,0	1/1:22,1:26:45.25:410,45,0	0/0:23,0:23:60.15:0,60,778	0/0:25,0:25:72.20:0,72,924	1/1:11,15:26:66.69:1025,67,0	1/1:27,2:42:61.72:815,62,0	1/1:20,0:22:21.49:231,21,0	1/1:10,0:11:20.84:191,21,0	1/1:14,7:20:50.67:669,51,0	1/1:9,15:23:57.66:856,58,0	1/1:7,6:13:30.47:453,30,0	1/1:13,2:15:30.87:302,31,0	1/1:15,0:20:39.94:351,40,0	1/1:16,0:18:20.88:229,21,0	1/1:10,9:19:48.05:733,48,0	1/1:13,10:23:63.16:912,63,0	1/1:13,12:25:66.08:913,66,0	1/1:5,2:7:15.05:226,15,0
chr10	55817610	.	AAAC	A	8730.84	PASS	AB=1.000;AC=35;AF=0.625;AN=56;BaseQRankSum=9.906;DP=612;FS=13.448;HRun=0;HaplotypeScore=208.9375;InbreedingCoeff=0.4271;MQ=62.09;MQ0=2;MQRankSum=-3.240;QD=19.62;ReadPosRankSum=4.511;VQSLOD=3.6508;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:72.24:0,72,1415	0/0:10,0:10:30.09:0,30,488	0/0:23,0:16:44.70:0,45,684	0/0:32,1:21:33.35:0,33,658	0/0:26,0:26:72.24:0,72,1307	1/1:12,6:18:25.73:516,26,0	1/1:13,4:17:32.77:448,33,0	1/1:19,11:30:30.13:859,30,0	1/1:18,3:21:29.74:648,30,0	1/1:23,6:29:18.54:668,19,0	1/1:16,6:22:48.27:673,48,0	0/1:27,0:26:99:163,0,182	0/0:23,0:23:66.22:0,66,1283	0/0:25,0:25:72.20:0,72,1223	1/1:20,7:27:55.98:790,56,0	0/1:39,0:38:99:137,0,441	0/1:23,0:23:69.98:137,0,70	0/1:10,0:10:83.97:96,0,84	1/1:16,3:19:24.69:509,25,0	1/1:21,2:22:46.58:537,47,0	1/1:10,4:14:11.12:349,11,0	0/1:15,0:15:76.40:78,0,76	0/1:19,0:19:25.10:25,0,243	0/1:18,0:18:41.26:85,0,41	1/1:12,6:18:33.51:575,34,0	1/1:16,7:23:39.88:697,40,0	1/1:24,3:27:0.36:554,0,0	1/1:3,2:5:15.01:187,15,0
chr10	55817612	.	AC	A	9028.63	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=15.457;DP=607;FS=2.164;HRun=1;HaplotypeScore=189.7785;InbreedingCoeff=0.9858;MQ=62.13;MQ0=2;MQRankSum=-9.602;QD=20.52;ReadPosRankSum=2.727;VQSLOD=5.0697;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:75.21:0,75,1048	0/0:10,0:10:30:0,30,367	0/0:24,0:16:44.16:0,44,547	0/0:37,0:24:11.74:0,12,515	0/0:24,0:24:72.14:0,72,1018	1/1:18,0:18:43.61:449,44,0	1/1:15,1:16:45.62:405,46,0	1/1:29,2:31:74.72:721,75,0	1/1:22,1:23:56.45:568,56,0	1/1:27,1:28:61.21:619,61,0	1/1:20,1:21:60.77:641,61,0	1/1:19,7:25:51.76:381,52,0	0/0:22,0:22:66.22:0,66,953	0/0:25,0:25:72.19:0,72,984	1/1:26,0:26:66.84:715,67,0	1/1:31,8:38:65.10:464,65,0	1/1:16,5:21:34.36:231,34,0	1/1:7,3:10:13.11:109,13,0	1/1:20,0:19:46.80:489,47,0	1/1:22,1:22:57.99:605,58,0	1/1:15,0:15:26.54:219,27,0	1/1:6,7:13:32.29:273,32,0	1/1:14,4:18:24.65:136,25,0	1/1:12,5:17:28.97:205,29,0	1/1:19,0:19:47.65:456,48,0	1/1:20,3:23:53.96:595,54,0	1/1:27,1:28:56.73:597,57,0	1/1:5,0:5:15.02:151,15,0
chr10	55817617	.	AC	A	10230.41	PASS	AB=0.791;AC=39;AF=0.696;AN=56;BaseQRankSum=14.770;DP=615;FS=10.187;HRun=1;HaplotypeScore=184.2033;InbreedingCoeff=0.7634;MQ=57.68;MQ0=3;MQRankSum=-8.929;QD=22.63;ReadPosRankSum=3.309;VQSLOD=3.7607;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:68.17:0,68,1027	0/0:9,0:9:27.08:0,27,372	0/0:23,0:16:42.47:0,42,479	0/0:36,0:23:25.37:0,25,525	0/0:25,0:25:75.23:0,75,1060	1/1:7,12:19:44.82:540,45,0	1/1:6,8:14:41.45:424,41,0	1/1:16,21:37:86.29:982,86,0	1/1:4,17:21:53.85:673,54,0	1/1:9,18:27:76.40:834,76,0	1/1:8,13:21:58.92:707,59,0	1/1:21,3:23:15.49:299,15,0	0/0:24,0:24:69.16:0,69,929	0/0:19,0:19:57.17:0,57,795	1/1:7,20:27:65.79:787,66,0	1/1:36,2:37:18.37:396,18,0	1/1:17,4:21:12.10:168,12,0	0/1:12,2:14:10.62:87,0,11	1/1:7,13:19:50.73:585,51,0	1/1:3,21:23:62.92:723,63,0	0/1:5,12:17:3.76:286,0,4	1/1:12,1:13:14.42:226,14,0	0/1:19,2:21:17.35:105,0,17	1/1:18,1:19:27.31:192,27,0	1/1:6,12:18:47.12:501,47,0	1/1:14,11:25:63.85:746,64,0	1/1:6,20:26:70.01:817,70,0	1/1:4,2:6:14.78:152,15,0
chr10	55817618	.	C	CAA	10402.54	PASS	AB=1.000;AC=41;AF=0.732;AN=56;BaseQRankSum=14.076;DP=627;FS=0.775;HRun=4;HaplotypeScore=198.5119;InbreedingCoeff=0.8721;MQ=57.66;MQ0=3;MQRankSum=-9.389;QD=22.47;ReadPosRankSum=1.255;VQSLOD=2.3941;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:26:67.99:0,68,938	0/0:9,0:9:8.79:0,9,233	0/0:25,0:17:39.65:0,40,436	0/0:37,0:24:50.04:0,50,529	0/0:26,0:26:72.23:0,72,959	1/1:20,0:20:44.50:418,44,0	1/1:13,1:14:35.54:259,36,0	1/1:37,0:37:92.28:740,92,0	1/1:21,0:21:53.88:549,54,0	1/1:27,0:27:70.33:576,70,0	1/1:21,0:21:60.12:534,60,0	1/1:18,6:23:41.90:620,42,0	0/0:22,0:22:63.21:0,63,839	0/0:19,0:19:51.16:0,51,678	1/1:27,0:27:65.73:649,66,0	1/1:20,18:37:56.61:1158,57,0	1/1:15,7:22:3.19:285,3,0	1/1:7,9:17:20.92:280,21,0	1/1:20,0:19:53.71:514,54,0	1/1:24,0:23:61.90:515,62,0	0/1:17,0:17:11.35:193,0,11	1/1:9,4:13:30.41:367,30,0	1/1:7,15:24:38.90:624,39,0	1/1:9,11:20:33.02:402,33,0	1/1:19,0:19:37.12:403,37,0	1/1:25,0:25:61.61:596,62,0	1/1:26,0:26:70.12:603,70,0	1/1:7,0:7:14.68:117,15,0
chr10	55817620	.	AAAC	A	8287.31	PASS	AB=1.000;AC=34;AF=0.607;AN=56;BaseQRankSum=10.200;DP=636;FS=2.349;HRun=0;HaplotypeScore=216.9278;InbreedingCoeff=0.4026;MQ=57.68;MQ0=4;MQRankSum=-7.030;QD=17.63;ReadPosRankSum=0.598;VQSLOD=4.4931;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:60.01:0,60,1455	0/0:9,0:9:24.08:0,24,436	0/0:23,0:16:46.01:0,46,627	0/0:39,0:26:62.38:0,62,757	0/0:27,0:27:78.26:0,78,1418	1/1:19,1:20:47.71:459,48,0	1/1:14,0:14:35.67:253,36,0	1/1:32,3:35:99:1048,102,0	1/1:21,0:21:53.41:540,53,0	1/1:27,2:29:78.17:778,78,0	1/1:20,1:21:62.72:582,63,0	0/1:24,0:23:99:141,0,200	0/0:22,0:22:66.22:0,66,1279	0/0:19,0:19:54.18:0,54,1016	1/1:28,0:28:66.76:630,67,0	0/1:38,0:37:80.31:80,0,605	0/1:22,0:22:99:122,0,113	0/1:17,0:17:94.31:94,0,109	1/1:19,2:19:53.62:510,54,0	1/1:24,0:23:62.79:585,63,0	0/1:16,0:16:12.07:204,0,12	0/1:15,0:15:85.04:85,0,139	0/1:24,0:24:34.71:35,0,346	0/1:20,0:20:76.12:96,0,76	1/1:20,0:20:45.06:524,45,0	1/1:21,4:25:68.69:735,69,0	1/1:27,0:27:70.13:633,70,0	1/1:4,5:9:14.99:153,15,0
chr10	55817622	.	AC	A	9017.77	PASS	AB=0.930;AC=34;AF=0.607;AN=56;BaseQRankSum=11.046;DP=620;FS=9.994;HRun=1;HaplotypeScore=187.6256;InbreedingCoeff=0.4045;MQ=57.36;MQ0=4;MQRankSum=-5.170;QD=19.78;ReadPosRankSum=0.585;VQSLOD=3.6638;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:63.58:0,64,1059	0/0:8,0:8:24.06:0,24,311	0/0:25,0:17:48.45:0,48,573	0/0:38,0:25:45.62:0,46,616	0/0:27,0:27:78.23:0,78,1096	1/1:14,5:19:47.16:519,47,0	1/1:12,2:14:39.54:391,40,0	1/1:26,9:35:99:992,101,0	1/1:18,2:20:51.62:597,52,0	1/1:23,5:28:76.48:762,76,0	1/1:15,6:21:60.76:629,61,0	0/1:21,2:22:56.72:223,0,57	0/0:22,0:22:66.01:0,66,931	0/0:18,0:18:54.16:0,54,765	1/1:22,6:28:72.16:778,72,0	0/1:37,1:37:99:163,0,182	0/1:18,3:21:39.78:149,0,40	0/1:14,2:16:52.24:82,0,52	1/1:17,4:19:43.95:451,44,0	1/1:23,2:24:63.47:656,63,0	0/1:14,1:15:10.08:293,0,10	0/1:14,1:15:41.62:191,0,42	0/1:23,1:24:39.42:39,0,170	0/1:17,1:18:73.33:119,0,73	1/1:14,2:16:44.81:477,45,0	1/1:18,5:23:62.75:599,63,0	1/1:24,3:27:71.70:764,72,0	1/1:7,2:9:14.90:144,15,0
chr10	55817623	.	C	CAA	12920.29	PASS	AB=0.950;AC=35;AF=0.625;AN=56;BaseQRankSum=12.751;DP=634;FS=0.000;HRun=4;HaplotypeScore=185.2256;InbreedingCoeff=0.4803;MQ=54.84;MQ0=6;MQRankSum=-7.062;QD=27.85;ReadPosRankSum=1.951;VQSLOD=3.3029;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:26:59.99:0,60,928	0/0:9,0:9:5.78:0,6,193	0/0:26,0:17:42.91:0,43,462	0/0:39,0:24:46.99:0,47,519	0/0:29,0:29:75.23:0,75,982	1/1:19,0:19:48.15:710,48,0	1/1:15,0:15:39.10:513,39,0	1/1:35,0:35:99:1386,100,0	1/1:20,0:20:51.15:762,51,0	1/1:28,0:28:77.95:1083,78,0	1/1:22,0:22:60.19:912,60,0	1/1:22,1:22:30.79:347,31,0	0/0:22,0:22:66.21:0,66,870	0/0:19,0:19:45.14:0,45,599	1/1:28,0:28:70.10:1043,70,0	0/1:34,4:37:3.83:552,0,4	0/1:22,1:23:46.84:209,0,47	0/1:17,0:17:17.60:98,0,18	1/1:22,0:20:45.61:634,46,0	1/1:25,0:24:63.66:936,64,0	0/1:15,0:15:5.95:320,0,6	0/1:13,2:15:44.43:242,0,44	0/1:23,1:24:46.72:221,0,47	0/1:17,1:18:28.95:154,0,29	1/1:16,0:16:45.14:695,45,0	1/1:23,0:23:60.19:901,60,0	1/1:27,0:27:72.16:972,72,0	1/1:11,0:11:15.05:231,15,0
chr10	55818599	.	TC	T	6874.18	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=14.255;DP=657;FS=3.781;HRun=4;HaplotypeScore=66.9748;InbreedingCoeff=0.9978;MQ=84.54;MQ0=0;MQRankSum=-6.420;QD=32.27;ReadPosRankSum=2.420;VQSLOD=5.6015;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:84.26:0,84,1149	0/0:7,0:7:21.07:0,21,294	0/0:18,0:18:48.16:0,48,659	0/0:24,0:24:68:0,68,881	0/0:21,0:21:63.21:0,63,881	0/0:19,0:19:57.18:0,57,782	0/0:21,0:21:63.19:0,63,863	0/0:26,0:25:75.23:0,75,1031	0/0:20,0:20:57.19:0,57,796	0/0:23,0:23:63.20:0,63,865	0/0:19,0:19:51.17:0,51,693	1/1:1,33:34:87.27:1044,87,0	0/0:17,0:17:42.14:0,42,585	0/0:19,1:20:21.18:0,21,720	0/0:29,0:29:81.27:0,81,1134	1/1:0,37:37:99:1260,105,0	1/1:2,39:41:99:1295,108,0	1/1:1,31:32:90.28:1080,90,0	0/0:20,0:20:57.18:0,57,783	0/0:17,0:17:51.16:0,51,698	0/0:29,0:29:78.25:0,78,1074	1/1:1,18:19:45.14:540,45,0	1/1:1,16:17:48.15:576,48,0	1/1:0,33:33:90.28:1080,90,0	0/0:15,0:15:45.15:0,45,627	0/0:31,0:31:90.30:0,90,1261	0/0:32,0:32:93.31:0,93,1294	0/0:7,0:7:21.07:0,21,294
chr10	55818758	.	G	GAGGT	5057.12	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=13.971;DP=606;FS=0.000;HRun=0;HaplotypeScore=127.2308;InbreedingCoeff=0.9882;MQ=75.83;MQ0=0;MQRankSum=-14.554;QD=46.40;ReadPosRankSum=1.940;VQSLOD=5.0154;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,105,1910	0/0:16,0:16:48.16:0,48,910	0/0:15,0:15:39.11:0,39,669	0/0:18,0:18:54.07:0,54,899	0/0:29,0:29:81.28:0,81,1523	0/0:27,0:27:72.25:0,72,1366	0/0:22,0:22:63.22:0,63,1183	0/0:37,0:37:99:0,99,1776	0/0:20,0:20:60.21:0,60,1117	0/0:19,0:19:54.19:0,54,1024	0/0:25,0:25:69.24:0,69,1310	1/1:5,17:22:57.20:1046,57,0	0/0:19,0:19:51.17:0,51,968	0/0:28,0:28:81.28:0,81,1537	0/0:22,0:22:66.21:0,66,1217	1/1:7,19:26:78.25:1493,78,0	1/1:5,13:18:45.15:837,45,0	1/1:5,7:12:30.10:694,30,0	0/0:15,0:15:39.13:0,39,714	0/0:20,0:20:60.21:0,60,1138	0/0:36,0:36:99:0,102,1865	1/1:3,7:10:21.07:345,21,0	1/1:5,10:15:27.09:459,27,0	1/1:2,4:6:9.02:183,9,0	0/0:16,0:16:33.11:0,33,616	0/0:29,0:29:78.27:0,78,1480	0/0:28,0:28:81.28:0,81,1536	0/0:20,0:20:60.17:0,60,1048
chr10	55818762	.	ATCTCCT	A	3655.13	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=13.545;DP=579;FS=0.972;HRun=0;HaplotypeScore=141.5057;InbreedingCoeff=0.9821;MQ=77.40;MQ0=0;MQRankSum=-13.499;QD=45.13;ReadPosRankSum=3.648;VQSLOD=3.8767;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,117,4312	0/0:16,0:16:48.16:0,48,1807	0/0:16,0:16:45.15:0,45,1369	0/0:20,0:20:60.15:0,60,1823	0/0:28,0:28:84.26:0,84,2934	0/0:28,0:28:81.28:0,81,3052	0/0:22,0:22:66.23:0,66,2371	0/0:34,0:34:99:0,102,3686	0/0:20,0:20:60.19:0,60,2170	0/0:22,0:22:63.22:0,63,2371	0/0:23,0:23:69.24:0,69,2496	1/1:1,17:18:48.16:838,48,0	0/0:18,0:18:54.19:0,54,1953	0/0:30,0:30:87.30:0,87,3209	0/0:22,0:22:66.23:0,66,2421	1/1:0,20:20:60.18:1018,60,0	1/1:0,13:13:36.12:621,36,0	1/1:0,7:7:18.06:374,18,0	0/0:17,0:17:51.15:0,51,1752	0/0:21,0:21:63.22:0,63,2326	0/0:35,0:35:99:0,102,3605	1/1:0,8:8:21.07:318,21,0	1/1:0,10:10:24.07:388,24,0	1/1:1,4:5:7.27:98,7,0	0/0:12,0:12:33.11:0,33,1243	0/0:27,0:27:81.28:0,81,3022	0/0:28,0:28:81.28:0,81,2960	0/0:19,0:19:54.15:0,54,1793
chr10	55819826	.	A	AG	9808.50	PASS	AB=0.929;AC=55;AF=0.982;AN=56;BaseQRankSum=-1.483;DP=540;FS=3.642;HRun=2;HaplotypeScore=121.9599;InbreedingCoeff=-0.0195;MQ=66.30;MQ0=0;MQRankSum=-2.988;QD=18.16;ReadPosRankSum=3.821;VQSLOD=5.2305;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:34,0:34:87.89:625,88,0	1/1:4,0:4:11.89:88,12,0	1/1:15,3:19:24.81:225,25,0	0/1:12,1:13:18.86:96,0,19	1/1:16,0:16:35.59:247,36,0	1/1:19,0:19:50.63:400,51,0	1/1:34,0:34:94.78:666,95,0	1/1:19,0:19:41.08:257,41,0	1/1:14,0:14:38.45:260,38,0	1/1:20,0:20:55.73:358,56,0	1/1:13,0:13:38.60:275,39,0	1/1:29,0:29:49.49:493,49,0	1/1:21,0:21:34.75:412,35,0	1/1:21,0:20:47.63:360,48,0	1/1:19,0:19:53.53:404,54,0	1/1:23,0:23:62.22:460,62,0	1/1:27,0:27:65.35:479,65,0	1/1:15,0:15:41.78:317,42,0	1/1:21,0:20:50.11:319,50,0	1/1:18,0:18:47.04:404,47,0	1/1:31,0:31:79.90:531,80,0	1/1:10,0:10:29.58:199,30,0	1/1:13,0:13:29.73:233,30,0	1/1:27,0:27:59.36:432,59,0	1/1:14,0:14:35.59:252,36,0	1/1:18,0:18:53.38:385,53,0	1/1:22,0:22:65.64:513,66,0	1/1:6,0:6:17.79:120,18,0
chr10	55819933	.	AG	A	438.50	PASS	AB=0.799;AC=14;AF=0.269;AN=52;BaseQRankSum=4.952;DP=216;FS=3.710;HRun=1;HaplotypeScore=72.5947;InbreedingCoeff=-0.1347;MQ=31.19;MQ0=4;MQRankSum=-1.032;QD=3.88;ReadPosRankSum=3.304;VQSLOD=0.7550;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:15,1:16:13.40:0,13,109	0/0:4,0:4:8.21:0,8,29	./.	./.	0/1:5,1:6:0:0,0,0	0/0:9,0:9:1.10:0,1,57	0/1:6,6:11:16.82:17,0,41	0/1:14,8:21:99:167,0,315	0/0:6,2:8:5.48:0,5,55	0/1:6,5:11:99:124,0,148	0/0:8,1:8:0.41:0,0,51	0/0:8,0:8:4.73:0,5,44	0/1:7,1:7:1.80:2,0,45	0/0:19,0:16:2.86:0,3,44	0/1:12,1:12:17.88:18,0,64	0/0:6,1:7:6.14:0,6,73	0/0:4,0:3:4.78:0,5,25	0/0:2,0:2:3.47:0,3,28	0/1:4,2:6:16.49:16,0,66	0/0:6,0:6:2.80:0,3,7	0/0:4,0:4:6.02:0,6,77	1/1:1,2:3:3.01:33,3,0	1/1:3,0:3:2.04:7,2,0	0/0:2,1:3:0:0,0,1	0/1:9,1:10:9.30:16,0,9	0/1:5,5:10:99:141,0,171	0/1:8,1:9:23.58:24,0,111	0/0:3,0:3:9.02:0,9,108
chr10	55822574	.	ACC	A	6053.97	PASS	AB=1.000;AC=26;AF=0.464;AN=56;BaseQRankSum=-4.276;DP=578;FS=0.474;HRun=11;HaplotypeScore=140.8102;InbreedingCoeff=0.6280;MQ=72.94;MQ0=3;MQRankSum=-3.847;QD=17.55;ReadPosRankSum=3.561;VQSLOD=2.9206;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,31:41:87.19:925,87,0	1/1:3,0:15:27.86:134,28,0	0/0:24,0:15:18.91:0,19,207	0/0:18,0:14:8.34:0,8,117	1/1:4,28:32:72.11:748,72,0	0/0:18,0:18:5.82:0,6,18	0/0:27,0:27:1.29:0,1,5	1/1:22,0:22:1.34:92,1,0	0/1:18,0:18:4.94:11,0,5	0/0:21,0:21:15.92:0,16,48	0/0:8,0:8:2.97:0,3,9	1/1:2,27:31:84.09:851,84,0	0/0:13,0:13:30.02:0,30,370	0/0:11,0:12:32.58:0,33,443	0/0:34,0:34:11.08:0,11,48	1/1:9,25:35:86.51:885,87,0	1/1:3,22:25:56.87:584,57,0	1/1:1,19:20:48.10:509,48,0	0/1:14,0:14:8.44:14,0,8	0/1:10,0:10:7.33:10,0,7	0/1:22,0:22:5.72:6,0,10	1/1:6,20:26:52.90:534,53,0	1/1:0,13:14:36.05:368,36,0	1/1:2,18:20:35.84:382,36,0	0/0:14,0:14:9.47:0,9,42	0/0:12,0:12:7.63:0,8,55	0/0:24,0:24:20.75:0,21,103	0/0:6,0:6:0.47:0,0,1
chr10	55822584	.	CCAAA	C	6758.44	PASS	AB=1.000;AC=27;AF=0.482;AN=56;BaseQRankSum=-9.427;DP=580;FS=2.660;HRun=0;HaplotypeScore=152.1684;InbreedingCoeff=0.8936;MQ=67.96;MQ0=3;MQRankSum=-4.359;QD=26.20;ReadPosRankSum=-0.602;VQSLOD=4.7487;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,105,1578	0/0:12,0:12:22.57:0,23,320	0/1:28,0:16:3.20:3,0,388	0/0:14,0:7:11.36:0,11,196	0/0:28,0:29:44.74:0,45,895	1/1:0,21:21:33.11:608,33,0	1/1:0,27:27:51.17:939,51,0	0/0:3,0:20:9.76:0,10,224	1/1:1,16:17:30.10:532,30,0	1/1:2,19:21:44.21:696,44,0	1/1:0,7:7:14.91:225,15,0	0/0:35,0:35:92.56:0,93,1303	0/0:18,0:18:49.32:0,49,932	0/0:16,0:16:45.10:0,45,889	1/1:2,34:36:69.09:1245,69,0	0/0:30,0:30:68.85:0,69,1175	0/0:28,0:28:69.18:0,69,962	0/0:22,0:22:57.19:0,57,820	1/1:0,11:11:29.78:396,30,0	1/1:2,6:8:17.88:237,18,0	1/1:0,25:25:30.05:505,30,0	0/0:20,0:20:53.81:0,54,726	0/0:18,0:18:40.71:0,41,656	0/0:23,0:23:54.11:0,54,762	1/1:0,13:13:12.04:223,12,0	1/1:3,12:15:17.20:494,17,0	1/1:3,22:25:6.70:599,7,0	1/1:1,3:4:3.01:56,3,0
chr10	55822585	.	CAAA	C	3912.40	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-2.829;DP=587;FS=0.000;HRun=8;HaplotypeScore=155.0845;InbreedingCoeff=0.9430;MQ=69.38;MQ0=3;MQRankSum=-5.818;QD=17.01;ReadPosRankSum=1.420;VQSLOD=0.1132;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,108,1964	0/0:12,0:12:26.78:0,27,243	0/0:27,0:17:6.29:0,6,392	0/0:15,0:8:17.24:0,17,283	0/0:29,0:29:73.71:0,74,1127	1/1:21,0:21:33.07:337,33,0	1/1:27,0:27:51.11:522,51,0	0/0:20,0:20:33.06:0,33,266	1/1:17,0:17:30.06:305,30,0	1/1:20,1:21:35.17:409,35,0	1/1:7,0:7:12.03:136,12,0	0/0:35,0:35:98.86:0,99,1537	0/0:18,0:18:42.13:0,42,792	0/0:16,0:16:36.12:0,36,725	1/1:35,1:36:68.85:706,69,0	0/0:30,0:30:87.22:0,87,1417	0/0:29,0:29:72.23:0,72,1167	0/0:23,0:23:60.20:0,60,1029	1/1:11,0:11:17.96:178,18,0	1/1:7,1:8:9.16:119,9,0	1/1:25,0:25:27.06:289,27,0	0/0:21,0:21:57.14:0,57,925	0/0:19,0:19:48.16:0,48,825	0/0:23,0:23:54.12:0,54,872	1/1:13,0:13:12.03:124,12,0	1/1:13,2:15:29.98:370,30,0	1/1:24,1:25:35.60:385,36,0	1/1:4,0:4:3.01:31,3,0
chr10	55822847	.	C	CT	1954.11	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-7.471;DP=696;FS=0.519;HRun=6;HaplotypeScore=71.4460;InbreedingCoeff=0.9976;MQ=67.64;MQ0=1;MQRankSum=-1.958;QD=29.61;ReadPosRankSum=2.145;VQSLOD=4.3593;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,34:37:84.27:1057,84,0	0/0:11,0:11:30.07:0,30,306	0/0:14,0:12:24.05:0,24,244	0/0:21,0:20:48.11:0,48,489	1/1:2,27:29:81.26:1019,81,0	0/0:20,0:20:48.11:0,48,490	0/0:18,0:18:39.06:0,39,389	0/0:40,0:39:99:0,117,1181	0/0:22,0:22:59.75:0,60,612	0/0:42,0:41:99:0,111,1108	0/0:19,0:19:54.12:0,54,551	0/0:23,0:23:63.14:0,63,643	0/0:32,0:32:72.14:0,72,726	0/0:25,0:25:66.12:0,66,666	0/0:16,0:16:45.10:0,45,459	0/0:24,0:24:63.13:0,63,637	0/0:25,0:25:57.09:0,57,572	0/0:28,0:28:72.16:0,72,734	0/0:13,0:12:24.05:0,24,245	0/0:26,0:26:75.16:0,75,758	0/0:39,0:39:96.20:0,96,972	0/0:25,0:25:69.14:0,69,698	0/0:17,0:17:42.09:0,42,429	0/0:25,0:25:66.11:0,66,662	0/0:25,0:25:69.16:0,69,704	0/0:31,0:31:78.16:0,78,792	0/0:24,0:24:69.12:0,69,693	0/0:25,0:25:75.17:0,75,765
chr10	55822935	.	CA	C	7057.43	PASS	AB=0.533;AC=47;AF=0.839;AN=56;BaseQRankSum=6.146;DP=381;FS=19.931;HRun=3;HaplotypeScore=43.5776;InbreedingCoeff=0.7279;MQ=47.97;MQ0=46;MQRankSum=-0.277;QD=25.95;ReadPosRankSum=0.415;VQSLOD=2.9881;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,13:17:36.08:417,36,0	1/1:0,7:7:15.05:186,15,0	0/0:26,0:2:2.97:0,3,20	0/0:32,0:5:15.01:0,15,179	1/1:3,6:8:12.03:149,12,0	1/1:2,10:12:30.09:370,30,0	1/1:2,9:10:20.74:260,21,0	1/1:6,7:9:6.02:74,6,0	1/1:0,14:14:26.82:334,27,0	1/1:4,8:11:24.06:284,24,0	1/1:0,3:3:3.48:38,3,0	1/1:1,8:9:21.07:259,21,0	0/0:24,0:24:69.21:0,69,952	0/0:27,0:27:81.26:0,81,1148	1/1:3,7:10:11.83:149,12,0	1/1:0,10:10:27.08:335,27,0	1/1:2,27:28:72.23:892,72,0	1/1:0,15:15:39.12:481,39,0	1/1:4,5:6:15.05:184,15,0	1/1:1,3:4:6.02:74,6,0	1/1:1,14:15:33.07:393,33,0	1/1:0,6:6:14.79:185,15,0	1/1:0,4:4:9.03:108,9,0	1/1:1,20:21:57.18:706,57,0	1/1:0,7:7:9.03:111,9,0	0/1:2,14:16:1.04:438,0,1	1/1:0,13:13:36.11:445,36,0	1/1:1,5:6:15.05:186,15,0
chr10	55823198	.	TGA	T	12118.69	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=20.692;DP=1283;FS=3.452;HRun=0;HaplotypeScore=206.3955;InbreedingCoeff=1.0000;MQ=62.28;MQ0=3;MQRankSum=-4.047;QD=37.52;ReadPosRankSum=3.215;VQSLOD=5.1865;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:67,0:67:99:0,190,3543	0/0:21,0:21:63.20:0,63,1182	0/0:46,0:33:33.65:0,34,1184	0/0:49,0:37:73.55:0,74,1432	0/0:47,0:47:99:0,135,2485	0/0:33,0:33:96.28:0,96,1743	0/0:43,0:43:99:0,126,2268	0/0:53,0:53:99:0,156,2828	0/0:44,0:44:99:0,129,2448	0/0:41,0:41:99:0,120,2256	0/0:23,0:23:66.23:0,66,1273	1/1:11,60:71:99:2871,207,0	0/0:46,0:46:99:0,135,2506	0/0:53,0:53:99:0,156,2883	0/0:64,0:64:99:0,187,3439	1/1:9,59:68:99:2736,162,0	1/1:7,29:36:96.30:1438,96,0	1/1:1,25:26:63.17:938,63,0	0/0:27,0:27:78.23:0,78,1463	0/0:44,0:44:99:0,132,2538	0/0:138,0:138:99:0,385,7264	1/1:0,37:37:99:1444,99,0	1/1:0,22:22:51.13:755,51,0	1/1:12,51:63:83.59:1938,84,0	0/0:25,0:25:72.22:0,72,1352	0/0:44,0:43:99:0,126,2371	0/0:32,0:32:96.28:0,96,1781	0/0:20,0:20:60.21:0,60,1158
chr10	55823260	.	CTG	C	7896.53	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=19.008;DP=1398;FS=3.951;HRun=0;HaplotypeScore=280.6733;InbreedingCoeff=0.9321;MQ=58.92;MQ0=4;MQRankSum=-0.620;QD=22.82;ReadPosRankSum=3.364;VQSLOD=4.8621;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:73,0:73:99:0,152,2983	0/0:25,0:25:54.18:0,54,918	0/0:45,2:31:0.09:0,0,984	0/0:50,0:35:30.43:0,30,811	0/0:42,0:41:96.26:0,96,1519	0/0:30,0:30:84.29:0,84,1424	0/0:44,0:44:99:0,117,1932	0/0:58,0:58:99:0,129,2069	0/0:61,0:61:99:0,172,2800	0/0:49,0:49:99:0,132,2174	0/0:19,0:19:42.14:0,42,711	1/1:6,72:78:99:1857,144,0	0/0:47,0:47:99:0,128,2133	0/0:57,0:57:99:0,160,2640	0/0:76,0:76:99:0,196,3221	1/1:12,70:82:63.49:1949,63,0	1/1:9,26:35:71.86:873,72,0	1/1:10,13:23:5.34:527,5,0	0/0:32,0:30:63.17:0,63,988	0/0:44,0:44:99:0,117,1954	0/0:149,0:148:99:0,373,6152	1/1:9,21:30:54.16:688,54,0	1/1:8,14:23:42.14:546,42,0	1/1:11,64:75:99:1456,117,0	0/0:42,0:42:99:0,111,1875	0/0:65,0:65:99:0,181,2910	0/0:26,0:26:66.23:0,66,1122	0/0:15,0:15:42.14:0,42,713
chr10	55824509	.	T	TGG	4017.03	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=12.272;DP=566;FS=8.467;HRun=6;HaplotypeScore=80.9407;InbreedingCoeff=0.9908;MQ=69.44;MQ0=2;MQRankSum=0.096;QD=31.63;ReadPosRankSum=4.487;VQSLOD=2.9159;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:76.70:0,77,916	0/0:5,0:5:12.04:0,12,146	0/0:25,0:19:36.53:0,37,438	0/0:20,0:15:26.95:0,27,267	0/0:23,0:23:51.13:0,51,609	0/0:36,0:36:99:0,102,1231	0/0:18,0:18:51.13:0,51,597	0/0:33,0:33:87.24:0,87,1046	0/0:13,0:13:33.10:0,33,402	0/0:15,0:15:42.13:0,42,512	0/0:9,0:9:21.06:0,21,254	1/1:4,18:22:48.12:781,48,0	0/0:14,0:14:30.06:0,30,353	0/0:21,0:21:57.10:0,57,661	0/0:22,0:22:60.19:0,60,730	1/1:4,19:23:43.21:670,43,0	1/1:4,21:25:41.54:755,42,0	1/1:4,15:19:39.13:645,39,0	0/0:17,0:17:18.90:0,19,441	0/0:18,0:18:36.10:0,36,436	0/0:26,0:26:66.20:0,66,802	1/1:1,9:11:24.08:406,24,0	1/1:2,8:10:24.08:400,24,0	1/1:1,15:17:22.63:359,23,0	0/0:20,0:20:57.13:0,57,667	0/0:29,0:29:84.26:0,84,1022	0/0:27,0:27:63.19:0,63,767	0/0:14,0:14:36.11:0,36,437
chr10	55824846	.	T	TTGTGTG	5885.83	PASS	AB=1.000;AC=31;AF=0.574;AN=54;BaseQRankSum=-4.492;DP=616;FS=4.243;HRun=0;HaplotypeScore=142.5008;InbreedingCoeff=0.8342;MQ=61.83;MQ0=20;MQRankSum=-4.641;QD=16.82;ReadPosRankSum=-2.641;VQSLOD=4.1274;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:22:7.29:0,7,80	0/0:5,0:5:9.03:0,9,185	./.	0/0:39,0:15:11.25:0,11,161	1/1:14,0:25:14.90:150,15,0	1/1:10,0:20:12.02:165,12,0	1/1:11,0:22:24.08:299,24,0	1/1:35,0:32:26.98:306,27,0	1/1:9,18:28:27.09:845,27,0	1/1:14,1:20:15.91:282,16,0	1/1:15,4:19:6.02:104,6,0	0/0:22,0:23:41.96:0,42,723	0/0:14,0:14:21.06:0,21,393	0/0:21,0:21:31.63:0,32,550	1/1:7,12:22:24.08:642,24,0	0/1:29,0:29:39.18:39,0,690	0/0:27,0:27:35.91:0,36,691	0/0:15,0:15:24.08:0,24,466	1/1:11,3:14:21.07:507,21,0	1/1:12,9:21:21.03:494,21,0	1/1:14,1:24:9.03:219,9,0	0/0:22,0:22:15:0,15,232	0/0:17,0:17:9.02:0,9,136	0/0:26,0:26:39.56:0,40,681	1/1:5,1:12:15.05:387,15,0	1/1:12,0:13:18.05:392,18,0	1/1:18,10:28:27.09:860,27,0	1/1:4,5:8:6.02:195,6,0
chr10	55824892	.	TTTTG	T	4505.88	PASS	AB=0.540;AC=13;AF=0.232;AN=56;BaseQRankSum=6.700;DP=543;FS=1.441;HRun=0;HaplotypeScore=108.4711;InbreedingCoeff=0.8958;MQ=61.02;MQ0=9;MQRankSum=-1.358;QD=33.13;ReadPosRankSum=5.179;VQSLOD=4.4189;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:39.13:0,39,908	0/0:9,0:9:27.09:0,27,606	0/0:42,0:19:48.10:0,48,926	0/0:51,0:26:21.41:0,21,845	0/0:16,0:15:42.14:0,42,1016	0/0:19,0:19:42.14:0,42,939	0/0:19,0:18:42.12:0,42,884	0/0:34,0:34:84.28:0,84,1836	0/0:18,0:17:21.06:0,21,376	0/0:15,0:14:36.12:0,36,832	0/0:12,0:12:24.08:0,24,566	1/1:1,17:18:45.15:781,45,0	0/0:17,0:17:48.16:0,48,1160	0/0:15,0:15:36.12:0,36,873	0/0:19,0:19:42.14:0,42,911	0/1:5,29:34:12.92:913,0,13	1/1:4,15:19:39.13:659,39,0	1/1:5,13:18:33.11:574,33,0	0/0:11,0:10:21.54:0,22,429	0/0:16,0:16:39.13:0,39,890	0/0:22,0:22:51.07:0,51,1223	1/1:3,15:18:39.02:607,39,0	1/1:0,6:6:14.73:231,15,0	1/1:3,20:23:44.77:741,45,0	0/0:11,0:11:18.06:0,18,415	0/0:14,0:14:39.13:0,39,948	0/0:24,0:22:60.20:0,60,1405	0/0:7,0:7:18.06:0,18,414
chr10	55825057	.	GCACA	G	2533.50	PASS	AB=0.896;AC=41;AF=0.820;AN=50;BaseQRankSum=5.520;DP=512;FS=4.068;HRun=0;HaplotypeScore=108.7983;InbreedingCoeff=0.2358;MQ=64.73;MQ0=5;MQRankSum=-2.900;QD=6.38;ReadPosRankSum=1.219;VQSLOD=2.3651;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:28:50.65:73,0,51	1/1:5,0:7:6.01:56,6,0	./.	./.	0/1:11,0:12:1.28:1,0,22	0/1:12,5:18:10.14:109,0,10	1/1:10,9:20:8.33:120,8,0	./.	0/1:11,1:11:31.50:32,0,243	1/1:11,7:18:17.98:206,18,0	1/1:6,1:9:6.01:74,6,0	1/1:26,0:26:30.03:279,30,0	0/0:18,0:18:33.09:0,33,659	0/1:20,1:21:45.03:45,0,596	1/1:13,6:21:30.06:386,30,0	1/1:24,0:24:19.27:171,19,0	1/1:16,0:16:6.01:56,6,0	1/1:10,0:10:3:28,3,0	1/1:15,0:18:1.06:24,1,0	1/1:7,0:11:14.99:130,15,0	1/1:18,10:28:21.07:313,21,0	1/1:11,0:11:9.01:84,9,0	1/1:20,0:20:8.69:83,9,0	1/1:23,0:23:0.47:1,0,0	0/0:13,0:12:9.03:0,9,194	1/1:12,6:18:17.70:194,18,0	1/1:13,2:17:12.03:165,12,0	1/1:5,1:6:3.48:47,3,0
chr10	55825086	.	CACACACACACACACACAG	C	1905.55	PASS	AB=0.990;AC=10;AF=0.179;AN=56;BaseQRankSum=6.856;DP=586;FS=9.049;HRun=0;HaplotypeScore=251.8100;InbreedingCoeff=0.2774;MQ=52.73;MQ0=20;MQRankSum=-3.380;QD=10.30;ReadPosRankSum=1.381;VQSLOD=1.2054;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:43:30.01:0,30,1103	0/0:7,0:7:21.04:0,21,637	0/0:22,0:8:23.32:0,23,287	0/0:21,0:9:20.94:0,21,453	0/0:19,0:18:30.51:0,31,753	0/0:18,0:17:41.98:0,42,1124	0/0:30,0:30:53.93:0,54,2264	1/1:7,20:26:55.27:500,55,0	0/0:15,0:13:39.12:0,39,1946	0/0:22,0:22:66.18:0,66,2220	0/0:9,0:9:21.49:0,21,566	0/1:29,0:28:99:547,0,140	0/0:17,0:17:48.13:0,48,3040	0/0:19,0:17:45.61:0,46,3188	0/0:20,0:19:54.17:0,54,2249	0/1:26,0:26:99:441,0,150	0/1:16,0:16:99:146,0,118	0/1:15,0:16:83.74:84,0,254	0/0:20,0:20:56.84:0,57,1801	0/0:12,0:12:34.87:0,35,890	0/0:41,0:39:81.20:0,81,3253	0/1:24,0:24:6.96:156,0,7	1/1:22,0:22:8.65:168,9,0	0/1:25,0:25:15.98:16,0,176	0/0:16,0:14:39.05:0,39,1420	0/0:20,0:19:57.14:0,57,2154	0/0:21,0:20:48.12:0,48,1900	0/0:8,0:8:24.04:0,24,789
chr10	55825090	.	CACACACACACACAG	C	4498.11	PASS	AB=0.933;AC=15;AF=0.268;AN=56;BaseQRankSum=4.009;DP=580;FS=14.311;HRun=0;HaplotypeScore=208.0346;InbreedingCoeff=0.8901;MQ=53.37;MQ0=21;MQRankSum=-3.428;QD=26.77;ReadPosRankSum=-0.001;VQSLOD=2.7573;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:41:24.01:0,24,665	0/0:8,0:8:24.04:0,24,359	0/0:24,0:10:29.15:0,29,260	0/0:22,0:9:20.74:0,21,305	0/0:21,0:20:32.16:0,32,493	0/0:18,0:17:41.81:0,42,758	0/0:29,0:29:53.60:0,54,1540	1/1:23,0:22:56.21:455,56,0	0/0:16,0:14:42.08:0,42,1308	0/0:23,0:23:69.14:0,69,1451	0/0:10,0:10:24.03:0,24,355	1/1:20,8:27:50.69:1398,51,0	0/0:17,0:17:48.12:0,48,2344	0/0:19,0:17:45.61:0,46,2463	0/0:20,0:19:40.84:0,41,1392	1/1:18,5:23:49.39:1025,49,0	1/1:11,2:13:23.41:375,23,0	0/1:13,1:14:31.05:279,0,31	0/0:21,0:21:56.70:0,57,1178	0/0:12,0:12:28.03:0,28,535	0/0:42,0:40:87.07:0,87,2102	1/1:5,18:23:9.50:384,10,0	1/1:5,16:21:11.69:396,12,0	1/1:23,0:23:24.81:186,25,0	0/0:16,0:14:39.04:0,39,1038	0/0:21,0:20:54.11:0,54,1245	0/0:23,0:22:54.53:0,55,1289	0/0:8,0:8:24.03:0,24,490
chr10	55825092	.	CACACACACACAG	C	3785.71	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=4.766;DP=569;FS=10.289;HRun=0;HaplotypeScore=188.9362;InbreedingCoeff=0.8975;MQ=54.91;MQ0=21;MQRankSum=-4.716;QD=24.74;ReadPosRankSum=0.108;VQSLOD=2.2306;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:41:24.01:0,24,475	0/0:8,0:8:23.93:0,24,235	0/0:24,0:9:25.96:0,26,217	0/0:22,0:9:20.63:0,21,258	0/0:22,0:21:37.85:0,38,445	0/0:20,0:19:47.80:0,48,663	0/0:31,0:31:59.23:0,59,1277	1/1:24,0:23:56.26:451,56,0	0/0:16,0:14:39.03:0,39,1049	0/0:23,0:23:66.52:0,67,1057	0/0:10,0:10:24.01:0,24,262	1/1:23,2:24:55.15:1170,55,0	0/0:17,0:17:48.12:0,48,1997	0/0:20,0:18:48.14:0,48,2132	0/0:18,0:17:13.24:0,13,1037	1/1:23,0:23:58.27:882,58,0	1/1:10,0:10:23.50:308,23,0	0/1:12,0:12:0.84:246,0,1	0/0:20,0:20:56.69:0,57,954	0/0:13,0:13:3.40:0,3,397	0/0:41,0:39:84.08:0,84,1644	1/1:19,2:21:9.03:286,9,0	1/1:18,0:18:9.63:284,10,0	1/1:20,0:20:22.03:158,22,0	0/0:16,0:14:36.04:0,36,852	0/0:19,0:18:53.98:0,54,873	0/0:26,0:25:60.52:0,61,1069	0/0:8,0:8:24.01:0,24,359
chr10	55825102	.	C	CAGAGAG	713.27	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=1.273;DP=593;FS=6.062;HRun=0;HaplotypeScore=163.1280;InbreedingCoeff=0.9363;MQ=63.78;MQ0=19;MQRankSum=0.537;QD=10.81;ReadPosRankSum=-0.888;VQSLOD=1.7571;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:11,33:44:18.68:125,19,0	0/0:5,0:5:15.05:0,15,309	0/0:31,0:18:41.73:0,42,841	0/0:24,0:13:32.25:0,32,620	1/1:21,0:20:35.65:709,36,0	0/0:20,0:19:45.15:0,45,952	0/0:34,0:34:69.23:0,69,1477	0/0:24,0:23:54.17:0,54,1009	0/0:14,0:12:30.08:0,30,580	0/0:22,0:22:44.98:0,45,869	0/0:13,0:13:26.44:0,26,490	0/0:30,0:29:71.76:0,72,1239	0/0:19,0:19:38.43:0,38,792	0/0:22,0:20:44.91:0,45,814	0/0:19,0:18:48.64:0,49,950	0/0:25,0:25:58.69:0,59,1125	0/0:12,0:12:25.53:0,26,406	0/0:12,0:12:30.05:0,30,526	0/0:24,0:24:62.33:0,62,1215	0/0:10,0:10:24.55:0,25,499	0/0:38,0:37:83.97:0,84,1624	0/0:21,0:21:9.03:0,9,130	0/0:18,0:18:11.76:0,12,124	0/0:19,0:19:24.08:0,24,452	0/0:16,0:14:36.12:0,36,798	0/0:22,0:21:50.72:0,51,925	0/0:27,0:27:66.23:0,66,1355	0/0:6,0:6:18.06:0,18,386
chr10	55825580	.	T	TG	719.20	PASS	AB=0.871;AC=34;AF=0.654;AN=52;BaseQRankSum=2.162;DP=216;FS=0.000;HRun=10;HaplotypeScore=48.8406;InbreedingCoeff=0.1609;MQ=83.46;MQ0=2;MQRankSum=-0.840;QD=4.50;ReadPosRankSum=-1.814;VQSLOD=-0.2691;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:17.43:0,17,132	0/0:8,0:8:14.91:0,15,119	0/1:10,0:8:1.62:2,0,19	0/1:14,0:9:13.88:14,0,17	1/1:3,0:3:2.99:24,3,0	1/1:4,2:7:4.56:36,5,0	0/1:9,7:16:12.57:82,0,13	0/0:1,0:5:3.72:0,4,11	1/1:6,2:8:8.19:90,8,0	1/1:3,2:5:3.01:32,3,0	1/1:2,1:3:3.01:32,3,0	1/1:7,0:7:5.90:40,6,0	0/0:8,0:8:8.87:0,9,74	0/1:16,1:18:10.20:10,0,130	0/1:8,2:10:14.23:78,0,14	1/1:7,0:9:7.97:35,8,0	1/1:3,2:7:14.70:113,15,0	1/1:3,0:7:5.78:32,6,0	0/1:2,0:2:0:0,0,0	./.	1/1:13,0:12:8.67:65,9,0	1/1:0,1:3:2.84:14,3,0	./.	1/1:0,0:1:2.84:14,3,0	1/1:5,0:5:5.98:47,6,0	0/1:5,2:7:15.11:55,0,15	0/0:12,4:16:1.99:0,2,16	0/1:3,2:5:14.40:56,0,14
chr10	55826093	.	G	GGC	7154.10	PASS	AB=1.000;AC=15;AF=0.278;AN=54;BaseQRankSum=-12.243;DP=595;FS=2.120;HRun=0;HaplotypeScore=73.2316;InbreedingCoeff=0.9145;MQ=70.68;MQ0=1;MQRankSum=0.680;QD=35.95;ReadPosRankSum=2.028;VQSLOD=6.8840;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,102,1225	0/0:11,0:11:27.09:0,27,343	0/1:10,0:11:4.98:25,0,5	./.	0/0:10,0:10:24.07:0,24,292	0/0:27,0:27:66.19:0,66,826	0/0:29,0:29:66.20:0,66,827	0/0:15,0:15:18.06:0,18,229	0/0:20,0:20:51.15:0,51,636	0/0:16,0:16:45.12:0,45,547	0/0:10,0:10:21.05:0,21,252	1/1:5,28:33:78.27:1298,78,0	0/0:28,0:28:69.17:0,69,835	0/0:29,0:29:66.20:0,66,827	0/0:20,0:20:48.13:0,48,584	1/1:6,14:20:48.16:775,48,0	1/1:3,26:29:69.24:1153,69,0	1/1:2,33:35:81.28:1351,81,0	0/0:23,0:23:57.16:0,57,708	0/0:6,0:6:9.03:0,9,115	0/0:49,0:49:99:0,129,1572	1/1:0,11:11:27.09:448,27,0	1/1:1,6:8:14.55:249,15,0	1/1:8,42:50:99:1855,111,0	0/0:11,0:11:27.09:0,27,344	0/0:26,0:26:51.13:0,51,614	0/0:14,0:14:36.12:0,36,458	0/0:9,0:9:24.08:0,24,305
chr10	55826994	.	GT	G	2913.24	PASS	AB=1.000;AC=34;AF=0.630;AN=54;BaseQRankSum=-6.739;DP=515;FS=35.783;HRun=6;HaplotypeScore=71.1895;InbreedingCoeff=0.6510;MQ=59.92;MQ0=14;MQRankSum=0.990;QD=8.25;ReadPosRankSum=5.355;VQSLOD=-0.5609;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:15:15.09:137,15,0	1/1:4,0:4:4.82:29,5,0	0/0:43,0:11:12.39:0,12,132	0/1:45,0:15:0.89:1,0,116	1/1:25,0:25:32.84:263,33,0	1/1:13,0:13:5.79:54,6,0	1/1:19,0:18:2.76:27,3,0	1/1:40,0:40:72.19:568,72,0	1/1:19,1:19:32.50:245,32,0	1/1:11,1:11:23.80:190,24,0	0/1:10,0:10:16.91:65,0,17	0/0:14,0:14:9.98:0,10,47	0/0:23,0:23:43.69:0,44,343	0/0:19,0:19:23.31:0,23,215	1/1:16,1:17:27.06:205,27,0	0/0:13,0:13:17.43:0,17,105	0/0:16,0:16:5.84:0,6,34	0/0:16,0:17:24.60:0,25,144	1/1:17,0:17:32.85:263,33,0	1/1:16,0:14:29.94:244,30,0	1/1:5,7:11:3:31,3,0	0/0:4,0:4:1.25:0,1,3	0/0:2,0:5:1.39:0,1,7	./.	1/1:10,11:20:2.89:25,3,0	1/1:20,0:19:16.99:284,17,0	1/1:24,0:22:3.98:239,4,0	1/1:23,0:21:31.02:226,31,0
chr10	55826999	.	TTA	T	2182.18	PASS	AB=0.925;AC=16;AF=0.296;AN=54;BaseQRankSum=-1.599;DP=543;FS=63.080;HRun=0;HaplotypeScore=59.6458;InbreedingCoeff=-0.3570;MQ=58.11;MQ0=16;MQRankSum=4.655;QD=6.55;ReadPosRankSum=7.251;VQSLOD=0.6573;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:19,0:19:70.18:106,0,70	0/0:7,0:7:9.81:0,10,54	0/0:45,0:8:12.39:0,12,133	0/0:46,0:15:15.48:0,15,125	0/1:28,0:28:82.76:154,0,83	0/1:5,10:16:54.55:55,0,64	0/1:8,10:17:29.71:30,0,42	0/1:34,0:35:49.28:399,0,49	0/1:20,0:19:30.39:172,0,30	0/1:5,10:14:13.43:171,0,13	0/1:12,0:12:57.38:57,0,59	0/0:15,0:14:17.47:0,17,124	0/0:21,0:21:44.79:0,45,438	0/0:18,0:18:10.04:0,10,287	0/1:22,0:20:20.57:159,0,21	0/0:14,0:13:20.70:0,21,147	0/0:13,0:13:8.78:0,9,60	0/0:18,0:17:27.85:0,28,215	0/1:15,0:14:0.10:224,0,0	0/1:21,0:19:39.57:191,0,40	0/1:12,0:11:6.52:16,0,7	0/0:3,0:3:4.17:0,4,20	0/0:6,0:6:7.47:0,7,27	./.	0/1:23,0:22:28.57:29,0,49	0/1:22,0:21:75.45:232,0,75	0/1:25,0:24:99:185,0,115	0/1:29,0:27:21.98:156,0,22
chr10	55827757	.	GGAA	G	11186.09	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=16.721;DP=648;FS=14.786;HRun=0;HaplotypeScore=95.0314;InbreedingCoeff=0.9757;MQ=82.50;MQ0=0;MQRankSum=-5.673;QD=38.98;ReadPosRankSum=1.147;VQSLOD=5.1264;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,126,2749	0/0:8,0:8:24.08:0,24,524	0/0:24,0:24:60.19:0,60,1122	0/0:21,0:20:46.94:0,47,883	0/0:25,0:25:72.25:0,72,1573	1/1:1,22:23:51.17:805,51,0	1/1:3,19:22:54.18:856,54,0	0/0:34,0:34:90.31:0,90,1962	1/1:0,21:21:60.20:950,60,0	1/1:1,21:22:63.21:997,63,0	1/1:4,18:22:51.17:805,51,0	0/0:28,0:28:78.27:0,78,1706	0/0:17,0:17:45.15:0,45,984	0/0:23,0:23:66.23:0,66,1440	1/1:2,25:27:66.23:1045,66,0	0/0:31,1:32:45.73:0,46,1903	0/0:26,0:26:69.22:0,69,1458	0/0:29,0:29:87.30:0,87,1901	1/1:2,18:20:54.18:846,54,0	1/1:1,29:30:75.21:1148,75,0	1/1:5,31:36:72.25:1142,72,0	0/0:12,0:12:33.11:0,33,721	0/0:19,0:19:54.19:0,54,1178	0/0:20,0:20:57.18:0,57,1186	1/1:0,22:22:57.19:902,57,0	1/1:2,22:24:66.21:1023,66,0	1/1:0,16:16:39.13:618,39,0	1/1:1,1:2:3.01:48,3,0
chr10	55828401	.	T	TTA	8382.81	PASS	AB=0.886;AC=15;AF=0.268;AN=56;BaseQRankSum=-15.946;DP=753;FS=9.246;HRun=0;HaplotypeScore=86.1851;InbreedingCoeff=0.9057;MQ=77.02;MQ0=0;MQRankSum=-1.078;QD=42.34;ReadPosRankSum=2.008;VQSLOD=6.5274;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,105,1546	0/0:15,0:15:45.15:0,45,663	0/0:19,0:19:51.63:0,52,720	0/0:11,0:11:33.11:0,33,477	0/0:31,0:31:93.31:0,93,1370	0/0:19,0:19:51.17:0,51,751	0/0:17,0:17:48.14:0,48,670	0/1:27,4:31:99:134,0,1038	0/0:25,0:25:75.25:0,75,1104	0/0:39,0:39:99:0,114,1663	0/0:14,0:14:42.13:0,42,599	1/1:0,33:33:93.32:1742,93,0	0/0:40,0:40:99:0,111,1614	0/0:28,0:28:81.26:0,81,1173	0/0:45,0:45:99:0,132,1924	1/1:3,37:41:99:1967,105,0	1/1:0,17:17:48.16:899,48,0	1/1:2,6:8:15.05:281,15,0	0/0:19,0:19:51.17:0,51,751	0/0:35,0:35:99:0,102,1499	0/0:43,0:43:99:0,123,1812	1/1:2,27:29:78.27:1461,78,0	1/1:1,22:23:59.74:1111,60,0	1/1:1,15:16:42.14:787,42,0	0/0:21,0:21:60.20:0,60,884	0/0:39,0:39:99:0,111,1634	0/0:48,0:48:99:0,132,1926	0/0:8,0:8:24.06:0,24,333
chr10	55828583	.	ATGAC	A	16479.40	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=13.419;DP=876;FS=6.273;HRun=0;HaplotypeScore=158.9062;InbreedingCoeff=0.9989;MQ=84.96;MQ0=0;MQRankSum=-4.029;QD=41.93;ReadPosRankSum=4.367;VQSLOD=5.2116;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,126,3219	0/0:19,0:19:51.18:0,51,1325	0/0:29,0:29:62.31:0,62,1453	0/0:27,0:27:69.17:0,69,1550	0/0:43,0:43:99:0,105,2644	1/1:1,19:20:48.16:863,48,0	1/1:1,21:22:57.15:990,57,0	0/0:32,0:32:75.26:0,75,1887	1/1:5,21:26:63.22:1118,63,0	1/1:3,28:31:81.26:1425,81,0	1/1:4,30:34:90.27:1583,90,0	0/0:33,0:33:87.28:0,87,2200	0/0:25,0:25:66.23:0,66,1680	0/0:44,0:44:99:0,120,3114	1/1:8,38:46:93.23:1604,93,0	0/0:42,0:42:99:0,114,2906	0/0:31,0:31:87.28:0,87,2197	0/0:26,0:26:66.23:0,66,1694	1/1:3,22:25:69.18:1104,69,0	1/1:6,32:38:87.21:1496,87,0	1/1:2,33:35:63.13:1064,63,0	0/0:30,0:30:81.28:0,81,2050	0/0:35,0:35:96.33:0,96,2488	0/0:25,0:25:69.24:0,69,1763	1/1:4,22:26:72.15:1174,72,0	1/1:1,30:31:90.29:1578,90,0	1/1:3,46:49:99:2157,120,0	1/1:4,6:10:18.06:324,18,0
chr10	55829203	.	TACACTGGAG	T	633.71	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.376;DP=699;FS=1.395;HRun=0;HaplotypeScore=197.6058;InbreedingCoeff=0.9973;MQ=85.39;MQ0=0;MQRankSum=-4.830;QD=48.75;ReadPosRankSum=1.462;VQSLOD=3.1933;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,126,5516	1/1:1,12:13:24.08:727,24,0	0/0:27,0:27:72.20:0,72,3067	0/0:17,0:17:45.08:0,45,1730	0/0:19,0:19:54.19:0,54,2504	0/0:27,0:27:75.26:0,75,3585	0/0:17,0:17:45.15:0,45,2078	0/0:28,0:28:78.27:0,78,3430	0/0:17,0:17:51.18:0,51,2250	0/0:28,0:28:81.27:0,81,3601	0/0:17,0:17:45.15:0,45,2163	0/0:32,0:32:87.27:0,87,3879	0/0:30,0:30:87.30:0,87,3949	0/0:32,0:32:93.31:0,93,4290	0/0:33,0:33:96.32:0,96,4243	0/0:34,0:34:99:0,102,4511	0/0:28,0:28:72.25:0,72,3243	0/0:21,0:21:57.17:0,57,2631	0/0:18,0:18:48.16:0,48,2250	0/0:33,0:33:96.33:0,96,4636	0/0:34,0:34:99:0,102,4593	0/0:19,0:19:54.19:0,54,2600	0/0:22,0:22:63.22:0,63,2771	0/0:28,0:28:81.26:0,81,3651	0/0:21,0:21:54.17:0,54,2076	0/0:15,0:15:39.13:0,39,1869	0/0:36,0:36:99:0,102,4832	0/0:10,0:10:30.10:0,30,1424
chr10	55829351	.	GCCAC	G	7666.34	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=11.413;DP=648;FS=11.117;HRun=0;HaplotypeScore=117.5416;InbreedingCoeff=0.9999;MQ=81.52;MQ0=1;MQRankSum=-4.143;QD=46.46;ReadPosRankSum=6.344;VQSLOD=5.0258;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:78.27:0,78,2051	0/0:12,0:12:36.12:0,36,939	0/0:28,0:28:66.22:0,66,1694	0/0:32,0:32:68.96:0,69,1645	0/0:12,0:12:33.10:0,33,825	0/0:22,0:22:63.22:0,63,1674	0/0:21,0:21:60.21:0,60,1600	0/0:28,0:28:69.24:0,69,1814	0/0:18,0:18:54.19:0,54,1399	0/0:20,0:20:57.20:0,57,1494	0/0:14,0:14:42.14:0,42,1112	1/1:2,28:29:75.26:1399,75,0	0/0:27,0:27:78.24:0,78,2017	0/0:30,0:30:87.28:0,87,2262	0/0:26,0:26:75.26:0,75,2000	1/1:1,28:29:81.28:1511,81,0	1/1:1,25:26:63.17:1175,63,0	1/1:1,17:18:48.16:895,48,0	0/0:17,0:17:45.14:0,45,1110	0/0:15,0:15:45.15:0,45,1159	0/0:58,0:58:99:0,160,4150	1/1:1,15:16:39.13:727,39,0	1/1:3,17:20:42.14:783,42,0	1/1:1,25:26:63.22:1176,63,0	0/0:16,0:16:39.12:0,39,982	0/0:17,0:17:51.18:0,51,1354	0/0:28,0:28:84.25:0,84,2142	0/0:12,0:12:36.12:0,36,956
chr10	55830137	.	G	GAA	4520.39	PASS	AB=0.849;AC=40;AF=0.714;AN=56;BaseQRankSum=8.339;DP=456;FS=0.000;HRun=8;HaplotypeScore=112.7422;InbreedingCoeff=0.6897;MQ=42.89;MQ0=33;MQRankSum=-6.598;QD=14.40;ReadPosRankSum=-5.098;VQSLOD=1.4504;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:28:57.13:0,57,624	0/0:6,0:6:12.03:0,12,134	0/0:28,0:2:3.01:0,3,33	0/0:32,0:3:6.02:0,6,65	0/0:19,0:17:21.03:0,21,224	1/1:11,4:16:32.16:372,32,0	1/1:4,4:8:8.98:94,9,0	1/1:9,4:14:27.09:307,27,0	1/1:7,0:6:9.48:102,9,0	1/1:4,8:15:29.71:341,30,0	1/1:10,3:13:6.47:177,6,0	1/1:12,0:13:24.35:220,24,0	0/0:12,0:12:21.34:0,21,263	0/0:15,0:15:36.09:0,36,401	1/1:15,2:23:34.19:336,34,0	1/1:11,0:12:12.13:110,12,0	1/1:21,0:21:14.80:234,15,0	0/1:12,0:13:14.08:149,0,14	1/1:10,8:18:21.30:260,21,0	1/1:10,12:24:32.94:391,33,0	0/1:7,1:9:15.29:61,0,15	1/1:11,0:10:15.01:172,15,0	1/1:11,0:11:6.96:66,7,0	1/1:4,0:3:2.97:21,3,0	1/1:6,8:16:18.65:193,19,0	1/1:11,7:19:29.60:257,30,0	1/1:11,10:23:32.90:424,33,0	1/1:3,6:12:21.88:235,22,0
chr10	55830145	.	AG	A	3775.38	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=6.625;DP=460;FS=3.965;HRun=1;HaplotypeScore=80.0052;InbreedingCoeff=0.8783;MQ=49.96;MQ0=25;MQRankSum=-5.913;QD=11.95;ReadPosRankSum=-4.304;VQSLOD=0.5466;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:29:66.13:0,66,804	0/0:6,0:6:15.04:0,15,179	0/0:30,0:3:5.84:0,6,48	0/0:32,1:8:7.95:0,8,123	0/0:18,0:16:30.49:0,30,360	1/1:19,2:21:57.06:398,57,0	1/1:11,0:9:12.22:81,12,0	1/1:13,2:15:33.54:236,34,0	1/1:6,0:5:12.21:81,12,0	1/1:16,1:17:42.57:271,43,0	1/1:13,2:15:38.50:303,38,0	1/1:13,0:13:23.58:123,24,0	0/0:11,0:11:25.20:0,25,353	0/0:15,0:15:40.93:0,41,494	1/1:20,2:22:39.20:283,39,0	1/1:11,0:11:24.28:160,24,0	1/1:20,1:20:12.31:97,12,0	1/1:13,1:13:11.93:97,12,0	1/1:17,0:16:36.71:209,37,0	1/1:28,0:26:54.66:358,55,0	1/1:7,1:7:9.16:122,9,0	1/1:10,0:9:7.28:36,7,0	1/1:9,0:8:18.60:126,19,0	1/1:4,0:3:1.56:19,2,0	1/1:19,0:18:23.44:164,23,0	1/1:15,2:17:29.41:179,29,0	1/1:23,1:23:38.49:241,38,0	1/1:14,0:13:29.50:192,30,0
chr10	55830164	.	G	GA	2106.65	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=7.398;DP=461;FS=2.294;HRun=7;HaplotypeScore=91.4319;InbreedingCoeff=0.9673;MQ=60.33;MQ0=6;MQRankSum=-7.875;QD=21.28;ReadPosRankSum=-0.780;VQSLOD=2.7765;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:81.13:0,81,782	0/0:7,0:7:21.03:0,21,202	0/0:18,0:8:17.97:0,18,159	0/0:13,0:11:23.25:0,23,206	0/0:17,0:15:42.04:0,42,406	0/0:19,0:19:54.08:0,54,516	0/0:12,0:11:21.03:0,21,203	0/0:15,0:15:33:0,33,309	0/0:7,0:6:15.02:0,15,145	0/0:15,0:15:38.89:0,39,375	0/0:20,0:20:48.07:0,48,461	1/1:8,12:20:48.01:547,48,0	0/0:14,0:14:33.05:0,33,318	0/0:16,0:16:48.06:0,48,457	0/0:20,0:20:36.85:0,37,407	1/1:9,9:18:34.96:391,35,0	1/1:10,11:20:47.79:518,48,0	1/1:7,7:13:19.95:241,20,0	0/0:19,0:18:38.04:0,38,364	0/0:34,0:33:84.12:0,84,804	0/0:8,0:7:15.02:0,15,145	1/1:1,10:11:30.09:354,30,0	1/1:4,5:8:15.04:177,15,0	1/1:4,2:5:6.02:72,6,0	0/0:18,0:18:32.72:0,33,317	0/0:20,0:20:36.53:0,37,348	0/0:21,0:20:41.96:0,42,390	0/0:19,0:18:42.07:0,42,405
chr10	55832954	.	TCCTGGGGGA	T	3171.02	PASS	AC=16;AF=0.320;AN=50;BaseQRankSum=8.913;DP=652;FS=18.740;HRun=0;HaplotypeScore=108.8975;InbreedingCoeff=0.8138;MQ=39.81;MQ0=45;MQRankSum=-7.788;QD=20.33;ReadPosRankSum=0.327;VQSLOD=1.3815;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:14.80:0,15,735	0/0:5,0:5:9.03:0,9,440	./.	./.	0/0:12,0:12:5.71:0,6,288	0/0:22,0:20:9.03:0,9,441	0/0:37,0:36:27.05:0,27,967	0/0:22,0:7:21.07:0,21,935	0/0:28,0:26:27.05:0,27,1194	0/0:28,0:23:66.22:0,66,3055	./.	1/1:7,30:14:11.62:371,12,0	1/1:23,0:21:0.16:2,0,0	0/0:50,0:49:22.98:0,23,1065	0/0:38,0:38:27.09:0,27,1323	1/1:1,27:17:30.10:929,30,0	1/1:4,17:12:24.08:744,24,0	1/1:3,14:9:15.05:463,15,0	0/0:17,0:7:21.07:0,21,1030	0/0:9,0:9:9.03:0,9,440	0/0:74,0:73:62.82:0,63,2633	1/1:3,5:6:12.04:372,12,0	1/1:0,8:8:12.04:372,12,0	1/1:2,12:9:2.82:93,3,0	0/0:12,0:11:2.76:0,3,147	0/0:21,0:20:54.14:0,54,2375	0/0:26,0:22:26.58:0,27,1318	0/0:9,0:8:9.03:0,9,441
chr10	55834899	.	TACAC	T	4943.14	PASS	AC=24;AF=0.444;AN=54;BaseQRankSum=-6.755;DP=478;FS=15.131;HRun=0;HaplotypeScore=94.5366;InbreedingCoeff=0.8763;MQ=69.28;MQ0=7;MQRankSum=1.186;QD=27.46;ReadPosRankSum=1.799;VQSLOD=3.8587;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:25:46.84:0,47,783	0/0:7,0:7:6.02:0,6,109	0/0:24,0:20:51.16:0,51,901	0/0:30,0:23:50.16:0,50,799	0/0:14,0:14:36.11:0,36,546	1/1:0,11:11:3.01:55,3,0	1/1:24,0:24:3.01:39,3,0	0/0:20,0:19:51.16:0,51,761	1/1:12,1:13:33.11:520,33,0	1/1:1,13:13:39.13:639,39,0	1/1:1,6:7:2.82:34,3,0	0/0:19,0:19:48.62:0,49,776	0/0:14,0:14:24.02:0,24,531	0/0:25,0:25:66.21:0,66,1139	1/1:21,1:22:48.16:755,48,0	0/0:18,0:18:29.94:0,30,597	0/0:22,0:22:54.55:0,55,869	0/0:17,0:15:45.07:0,45,763	1/1:5,16:18:45.15:735,45,0	1/1:1,8:9:3.01:37,3,0	./.	0/0:9,0:9:24.06:0,24,368	0/0:15,0:15:36.10:0,36,575	0/0:2,0:21:12.04:0,12,186	1/1:15,0:15:24.08:357,24,0	1/1:2,17:19:48.61:734,49,0	1/1:18,0:18:54.13:767,54,0	1/1:7,0:6:18.06:272,18,0
chr10	55834903	.	CACACAG	C	4726.54	PASS	AC=24;AF=0.444;AN=54;BaseQRankSum=-6.629;DP=470;FS=17.660;HRun=0;HaplotypeScore=108.0953;InbreedingCoeff=0.8739;MQ=66.50;MQ0=9;MQRankSum=1.786;QD=27.01;ReadPosRankSum=2.989;VQSLOD=3.5426;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:46.77:0,47,894	0/0:5,0:5:6.02:0,6,113	0/0:21,0:17:51.16:0,51,901	0/0:27,0:20:50.16:0,50,799	0/0:14,0:14:36.11:0,36,546	1/1:11,0:11:2.68:11,3,0	1/1:2,20:22:2.63:69,3,0	0/0:18,0:17:51.16:0,51,761	1/1:12,0:13:32.49:467,32,0	1/1:14,0:13:38.79:553,39,0	1/1:8,0:7:2.57:34,3,0	0/0:19,0:19:51.61:0,52,846	0/0:18,0:18:34.30:0,34,871	0/0:25,0:25:66.68:0,67,1292	1/1:20,0:21:48.15:788,48,0	0/0:21,0:20:41.93:0,42,678	0/0:22,0:21:54.64:0,55,970	0/0:17,0:15:45.11:0,45,896	1/1:20,0:17:44.81:650,45,0	1/1:8,0:8:3.01:37,3,0	./.	0/0:9,0:9:24.06:0,24,368	0/0:15,0:14:36.10:0,36,609	0/0:22,0:22:12.04:0,12,215	1/1:14,0:13:24.08:357,24,0	1/1:18,0:18:48.14:732,48,0	1/1:18,1:19:52.55:755,53,0	1/1:7,0:6:18.06:272,18,0
chr10	55834907	.	C	CAG	275.17	PASS	AB=0.928;AC=14;AF=0.368;AN=38;BaseQRankSum=-1.582;DP=484;FS=10.275;HRun=0;HaplotypeScore=104.0784;InbreedingCoeff=0.3724;MQ=64.32;MQ0=11;MQRankSum=1.439;QD=1.66;ReadPosRankSum=2.794;VQSLOD=1.3007;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:22:10.29:96,10,0	./.	./.	./.	./.	0/0:13,0:13:2.94:0,3,18	0/0:23,0:23:2.56:0,3,15	./.	0/0:15,0:15:11.60:0,12,72	0/0:20,0:19:4.69:0,5,41	0/1:8,0:7:0:0,0,0	1/1:18,0:18:6:51,6,0	0/0:17,0:18:28.21:0,28,196	0/0:24,0:24:11.80:0,12,117	0/0:20,0:20:8.58:0,9,45	0/1:13,6:19:8.18:38,0,8	1/1:24,0:22:9.50:126,10,0	0/1:16,1:15:31.65:32,0,55	0/0:21,0:17:2.91:0,3,19	./.	0/0:21,0:20:3.46:0,3,25	./.	1/1:16,0:15:3:28,3,0	1/1:24,0:24:3:28,3,0	0/1:16,0:15:0:0,0,0	./.	0/0:18,0:18:3.31:0,3,15	./.
chr10	55835065	.	G	GA	617.01	PASS	AB=0.929;AC=5;AF=0.089;AN=56;BaseQRankSum=-6.033;DP=612;FS=7.853;HRun=11;HaplotypeScore=71.5671;InbreedingCoeff=0.6785;MQ=57.94;MQ0=2;MQRankSum=0.922;QD=8.57;ReadPosRankSum=-5.415;VQSLOD=0.8684;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:48,2:52:62.49:0,62,834	1/1:1,7:8:12.02:122,12,0	0/0:6,0:6:10.93:0,11,70	0/0:5,0:4:5.96:0,6,45	0/0:30,0:29:56.73:0,57,435	0/0:17,1:19:13.42:0,13,277	0/0:19,0:18:44.81:0,45,348	1/1:13,24:37:28.41:610,28,0	0/0:19,0:19:38.73:0,39,302	0/1:24,2:24:1.10:1,0,357	0/0:19,1:20:5.43:0,5,225	0/0:15,0:16:28.89:0,29,213	0/0:16,0:17:40.87:0,41,307	0/0:18,1:20:46.80:0,47,351	0/0:20,0:21:40.80:0,41,308	0/0:20,0:20:41.79:0,42,325	0/0:32,0:32:74.66:0,75,580	0/0:12,2:15:4.45:0,4,204	0/0:27,0:28:64.73:0,65,490	0/0:15,0:15:38.85:0,39,302	0/0:21,0:22:51.06:0,51,380	0/0:17,0:18:22.81:0,23,167	0/0:19,0:19:11.39:0,11,271	0/0:34,0:36:87.75:0,88,662	0/0:22,0:22:50.75:0,51,394	0/0:22,0:24:48.86:0,49,360	0/0:21,0:22:52.83:0,53,400	0/0:21,1:22:10.64:0,11,270
chr10	55835392	.	T	TA	32.68	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=1.963;DP=383;FS=5.997;HRun=0;HaplotypeScore=74.0206;InbreedingCoeff=0.3564;MQ=58.46;MQ0=18;MQRankSum=0.935;QD=0.78;ReadPosRankSum=-5.553;VQSLOD=-0.5093;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:36.09:0,36,462	0/0:9,0:9:17.27:0,17,153	0/0:16,0:2:5.03:0,5,29	0/1:15,0:7:1.04:1,0,28	0/0:22,0:21:37.98:0,38,542	0/0:10,0:10:21.01:0,21,212	0/0:10,0:8:21.01:0,21,224	1/1:20,6:21:4.12:111,4,0	0/0:9,0:9:11.75:0,12,182	0/0:17,0:15:16.33:0,16,326	0/0:15,0:13:12.50:0,13,132	0/0:8,0:7:18.06:0,18,243	0/0:14,0:14:39.08:0,39,504	0/0:8,0:8:21.06:0,21,264	0/0:11,0:11:26.88:0,27,276	0/0:14,0:14:42:0,42,534	0/0:17,0:15:27.09:0,27,348	0/0:12,0:12:24.05:0,24,304	0/0:19,0:17:2.23:0,2,345	0/0:13,0:13:5.69:0,6,255	0/0:6,0:5:9.02:0,9,98	0/0:4,0:4:8.62:0,9,91	0/0:9,0:9:24.05:0,24,301	0/0:8,0:7:11.93:0,12,130	0/0:18,0:17:17.21:0,17,240	0/0:22,0:22:53.93:0,54,695	0/0:20,0:20:32.38:0,32,323	0/0:11,0:11:29.94:0,30,291
chr10	55835393	.	T	TAA	3108.64	PASS	AB=0.635;AC=28;AF=0.500;AN=56;BaseQRankSum=-4.755;DP=401;FS=7.847;HRun=15;HaplotypeScore=79.7567;InbreedingCoeff=0.7610;MQ=58.24;MQ0=18;MQRankSum=-1.383;QD=13.12;ReadPosRankSum=-3.948;VQSLOD=1.3657;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:19:30.19:0,30,224	0/1:2,0:10:11.08:21,0,11	0/0:15,0:2:2.55:0,3,11	0/0:14,0:7:4.54:0,5,27	0/0:22,0:21:18.80:0,19,269	1/1:6,5:15:15.77:162,16,0	0/1:6,4:8:24.71:140,0,25	1/1:28,0:22:10.38:213,10,0	1/1:3,5:9:22.41:218,22,0	1/1:6,13:17:23.82:388,24,0	1/1:4,11:13:12.04:152,12,0	0/0:3,0:7:13.71:0,14,58	0/0:14,0:14:33.19:0,33,232	0/0:6,0:7:20.32:0,20,149	1/1:9,2:12:20.18:191,20,0	0/0:4,0:14:22.63:0,23,116	0/0:1,0:15:21.89:0,22,92	0/0:0,0:11:19.18:0,19,81	1/1:8,9:18:17.21:334,17,0	1/1:4,8:15:34.94:334,35,0	1/1:1,5:5:6.02:76,6,0	0/0:1,0:4:8.02:0,8,33	0/0:1,0:9:19.20:0,19,81	0/0:2,0:7:8.15:0,8,34	1/1:5,13:19:30.92:345,31,0	1/1:10,12:25:36.02:386,36,0	1/1:6,13:21:17.89:200,18,0	1/1:6,4:11:14.88:161,15,0
chr10	55835470	.	CAGACAGAT	C	4167.34	PASS	AB=0.600;AC=15;AF=0.268;AN=56;BaseQRankSum=11.291;DP=476;FS=18.596;HRun=0;HaplotypeScore=122.2618;InbreedingCoeff=0.8579;MQ=57.09;MQ0=4;MQRankSum=-10.726;QD=43.87;ReadPosRankSum=1.164;VQSLOD=2.0098;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:51.07:0,51,1718	1/1:5,0:5:5.81:125,6,0	0/0:21,0:16:39.08:0,39,1190	0/0:13,0:12:30.06:0,30,962	0/0:15,0:15:45.14:0,45,1688	0/0:16,0:16:36.02:0,36,1315	0/0:16,0:16:42.13:0,42,1606	0/0:42,0:42:99:0,105,3277	0/0:11,0:11:30.10:0,30,1253	0/0:23,0:23:66.23:0,66,2639	0/0:16,0:16:45.15:0,45,1510	1/1:0,8:6:12.04:331,12,0	0/0:11,0:11:30.10:0,30,1061	0/0:18,0:18:51.12:0,51,1718	0/0:26,0:26:69.24:0,69,2873	0/1:4,8:11:99:546,0,107	1/1:11,9:18:35.90:664,36,0	1/1:8,4:12:5.05:417,5,0	0/0:19,0:17:51.12:0,51,1693	0/0:18,0:18:54.15:0,54,1989	0/0:15,0:15:40.67:0,41,1542	1/1:1,14:15:36.12:990,36,0	1/1:0,8:8:20.99:514,21,0	1/1:3,12:13:21.07:580,21,0	0/0:13,0:13:33.11:0,33,1322	0/0:30,0:30:87.30:0,87,3395	0/0:21,0:21:60.18:0,60,2429	0/0:17,0:16:48.16:0,48,2055
chr10	55836526	.	A	AAAAC	5702	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-1.435;DP=512;FS=1.686;HRun=0;HaplotypeScore=128.4095;InbreedingCoeff=0.9771;MQ=69.17;MQ0=1;MQRankSum=-11.369;QD=45.62;ReadPosRankSum=-1.506;VQSLOD=5.0454;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:96.33:0,96,1621	0/0:6,0:6:18.06:0,18,304	0/0:14,0:13:27.08:0,27,403	0/0:25,0:26:54.25:0,54,937	0/0:16,0:16:48.13:0,48,758	0/0:14,0:14:33.11:0,33,558	0/0:22,0:22:60.20:0,60,1014	0/0:23,0:23:57.18:0,57,895	0/0:19,0:19:48.16:0,48,787	0/0:13,0:13:36.11:0,36,563	0/0:9,0:9:15.04:0,15,228	1/1:2,20:23:51.18:1256,51,0	0/0:20,0:20:57.19:0,57,935	0/0:22,0:22:8.72:0,9,152	0/0:27,0:27:60.20:0,60,990	1/1:4,13:20:39.61:953,40,0	1/1:9,11:22:39:853,39,0	1/1:5,8:13:24.08:596,24,0	0/0:6,0:6:12.04:0,12,203	0/0:23,0:23:63.22:0,63,1061	0/0:30,0:30:78.27:0,78,1317	1/1:2,10:12:24.08:595,24,0	1/1:6,6:12:24.07:526,24,0	1/1:7,13:22:39.13:924,39,0	0/0:12,0:12:33.11:0,33,557	0/0:16,0:16:45.13:0,45,729	0/0:19,0:19:33.11:0,33,557	0/0:8,0:8:24.08:0,24,405
chr10	55836823	.	C	CT	4789.19	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-13.131;DP=649;FS=0.784;HRun=3;HaplotypeScore=60.4095;InbreedingCoeff=0.9998;MQ=81.08;MQ0=0;MQRankSum=-2.200;QD=35.21;ReadPosRankSum=3.226;VQSLOD=5.4446;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:47:99:0,141,1678	0/0:12,0:12:36.08:0,36,418	0/0:23,0:23:69.21:0,69,820	0/0:22,0:21:51.11:0,51,587	0/0:20,0:20:51.14:0,51,600	0/0:26,0:26:78.23:0,78,924	0/0:22,0:22:60.18:0,60,720	0/0:35,0:35:99:0,99,1180	0/0:15,0:15:45.14:0,45,539	0/0:31,0:31:90.27:0,90,1070	0/0:17,0:17:48.15:0,48,575	1/1:1,23:24:51.17:714,51,0	0/0:27,0:27:78.21:0,78,913	0/0:20,0:20:57.17:0,57,684	0/0:41,0:41:99:0,111,1332	1/1:1,29:30:78.26:1093,78,0	1/1:1,12:13:36.12:504,36,0	1/1:0,17:17:51.17:714,51,0	0/0:16,0:16:42.13:0,42,504	0/0:23,0:23:63.18:0,63,744	0/0:33,0:33:93.28:0,93,1115	1/1:3,12:15:33.11:462,33,0	1/1:0,18:18:45.15:630,45,0	1/1:1,18:19:48.16:672,48,0	0/0:21,0:21:60.18:0,60,719	0/0:21,0:21:57.16:0,57,674	0/0:30,0:30:81.23:0,81,959	0/0:10,0:10:30.09:0,30,360
chr10	55837206	.	A	AT	5270.47	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-9.346;DP=674;FS=11.854;HRun=9;HaplotypeScore=68.7943;InbreedingCoeff=0.9664;MQ=72.16;MQ0=0;MQRankSum=-1.572;QD=27.59;ReadPosRankSum=-2.115;VQSLOD=3.7326;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:92.69:0,93,964	0/0:15,0:15:32.99:0,33,287	0/0:10,0:11:18.82:0,19,148	0/0:13,0:11:8.53:0,9,100	0/0:22,0:22:53.96:0,54,465	0/0:24,0:24:62.99:0,63,547	0/0:18,0:18:53.97:0,54,465	1/1:5,29:34:87.21:943,87,0	0/0:23,0:24:62.01:0,62,526	0/0:31,0:30:83.50:0,83,703	0/0:20,0:20:53.97:0,54,465	1/1:5,25:30:78.20:855,78,0	0/0:26,0:26:68.96:0,69,595	0/0:30,0:30:80.96:0,81,703	0/0:36,0:36:89.96:0,90,781	1/1:3,35:38:82.20:1122,82,0	1/1:4,13:17:45.12:497,45,0	1/1:4,11:15:13.04:363,13,0	0/0:17,0:17:32.96:0,33,286	0/0:33,0:33:83.71:0,84,718	0/0:23,0:23:56.98:0,57,495	1/1:2,12:15:6.10:333,6,0	1/1:4,23:27:44.85:692,45,0	1/1:1,14:15:42.11:465,42,0	0/0:25,0:26:53:0,53,446	0/0:24,0:24:65.35:0,65,555	0/0:38,0:38:79.95:0,80,676	0/0:11,0:11:29.99:0,30,260
chr10	55837289	.	A	ATCT	32549.42	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=-15.419;DP=830;FS=2.036;HRun=0;HaplotypeScore=103.0093;InbreedingCoeff=1.0000;MQ=87.41;MQ0=0;MQRankSum=-7.692;QD=54.43;ReadPosRankSum=2.190;VQSLOD=7.0780;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,144,2371	0/0:19,0:19:57.12:0,57,867	0/0:33,0:33:73.58:0,74,1250	0/0:28,0:28:74.49:0,74,1111	0/0:31,0:31:90.29:0,90,1460	1/1:2,27:29:78.27:1717,78,0	1/1:0,26:27:63.22:1401,63,0	1/1:5,23:28:66.22:1436,66,0	1/1:1,19:22:54.19:1199,54,0	1/1:2,23:26:69.18:1445,69,0	1/1:2,25:27:69.19:1438,69,0	1/1:2,32:34:96.32:2129,96,0	0/0:31,0:31:90.27:0,90,1443	0/0:38,0:38:99:0,114,1757	1/1:7,29:36:84.29:1867,84,0	1/1:7,29:36:99:2123,102,0	1/1:7,15:22:54.17:1141,54,0	1/1:4,17:21:48.16:1067,48,0	1/1:5,18:24:66.17:1291,66,0	1/1:2,22:24:63.17:1355,63,0	1/1:2,40:42:99:2424,108,0	1/1:2,16:20:51.18:1116,51,0	1/1:7,17:24:57.14:1177,57,0	1/1:7,10:17:39.07:750,39,0	1/1:1,28:30:75.26:1669,75,0	1/1:2,28:32:90.25:1865,90,0	1/1:4,41:49:99:2444,111,0	1/1:4,22:26:66.23:1496,66,0
chr10	55837655	.	C	CTT	19586.35	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-15.420;DP=705;FS=5.544;HRun=0;HaplotypeScore=77.8098;InbreedingCoeff=0.9977;MQ=82.95;MQ0=0;MQRankSum=-4.542;QD=56.12;ReadPosRankSum=2.695;VQSLOD=5.1709;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:93.32:0,93,1508	1/1:0,9:9:27.09:547,27,0	0/0:27,0:27:81.12:0,81,1187	0/0:21,0:21:63.21:0,63,1009	0/0:17,0:17:45.15:0,45,728	1/1:1,23:26:69.24:1377,69,0	1/1:1,33:35:99:2073,102,0	0/0:33,0:33:99:0,99,1593	1/1:0,28:28:75.26:1524,75,0	1/1:3,23:28:81.27:1589,81,0	1/1:1,15:17:48.12:933,48,0	0/0:48,0:48:99:0,141,2273	0/0:29,0:29:84.27:0,84,1345	0/0:33,0:33:93.32:0,93,1512	1/1:2,34:36:99:2073,102,0	0/0:29,0:29:84.23:0,84,1318	0/0:22,0:22:66.23:0,66,1074	0/0:17,0:17:51.17:0,51,832	1/1:2,13:15:42.12:816,42,0	1/1:3,26:29:87.18:1645,87,0	1/1:2,58:61:99:3354,166,0	0/0:14,0:14:42.14:0,42,684	0/0:12,0:12:36.12:0,36,587	0/0:22,0:22:66.23:0,66,1065	1/1:0,13:14:39.13:791,39,0	1/1:1,20:20:60.21:1219,60,0	1/1:0,24:24:66.23:1340,66,0	1/1:1,4:5:15.05:304,15,0
chr10	55838972	.	AC	A	14874.53	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=9.102;DP=904;FS=0.508;HRun=2;HaplotypeScore=126.8456;InbreedingCoeff=1.0000;MQ=77.87;MQ0=0;MQRankSum=-0.478;QD=34.35;ReadPosRankSum=0.532;VQSLOD=4.3577;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,153,2250	0/0:15,0:15:39.13:0,39,581	0/0:19,0:19:51.13:0,51,662	0/0:18,0:18:42.14:0,42,618	0/0:36,0:36:99:0,108,1587	1/1:1,16:17:39.13:506,39,0	1/1:0,37:37:99:1325,102,0	0/0:30,0:30:90.28:0,90,1293	1/1:2,29:31:75.24:974,75,0	1/1:1,54:55:99:2047,160,0	1/1:1,35:36:90.29:1169,90,0	0/0:43,0:43:99:0,126,1866	0/0:27,0:27:78.25:0,78,1149	0/0:38,0:38:99:0,111,1639	1/1:1,35:36:93.30:1208,93,0	0/0:36,1:37:69.37:0,69,1474	0/0:36,0:36:99:0,108,1614	0/0:17,0:17:51.17:0,51,764	1/1:1,24:25:72.19:893,72,0	1/1:1,34:35:90.29:1161,90,0	1/1:1,35:36:90.29:1167,90,0	0/0:36,0:36:95.94:0,96,1436	0/0:36,0:36:99:0,108,1577	0/0:30,0:30:87.24:0,87,1259	1/1:1,27:28:69.22:896,69,0	1/1:1,35:36:99:1349,105,0	1/1:0,46:46:99:1714,132,0	1/1:0,15:15:36.12:467,36,0
chr10	55839664	.	CTT	C	2460.44	PASS	AB=0.718;AC=29;AF=0.518;AN=56;BaseQRankSum=-2.915;DP=516;FS=2.512;HRun=16;HaplotypeScore=77.0019;InbreedingCoeff=0.5022;MQ=72.51;MQ0=4;MQRankSum=-1.001;QD=7.86;ReadPosRankSum=2.961;VQSLOD=0.9368;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:35:39.84:0,40,212	0/1:2,1:12:1.20:42,0,1	0/1:37,0:17:12.91:13,0,100	0/0:25,0:16:2.81:0,3,119	0/1:11,2:21:6.95:7,0,237	1/1:6,10:20:18.55:210,19,0	1/1:5,4:9:0.75:126,1,0	0/0:15,1:32:35.18:0,35,287	1/1:7,5:12:25.73:184,26,0	1/1:6,5:12:16.93:119,17,0	1/1:4,13:19:29.54:224,30,0	0/0:5,1:14:0.10:0,0,71	0/0:16,0:19:35.99:0,36,374	0/0:14,0:14:28.96:0,29,239	1/1:3,12:14:14.89:125,15,0	0/1:8,0:14:15.13:15,0,57	0/0:5,1:18:5.36:0,5,98	0/0:6,1:20:1.74:0,2,59	0/1:8,6:16:13.53:139,0,14	1/1:6,10:19:12.93:168,13,0	1/1:3,3:6:8.88:75,9,0	0/0:2,0:5:12.60:0,13,58	0/0:2,0:11:2.98:0,3,31	0/0:6,0:9:13.09:0,13,71	1/1:11,11:23:28.79:315,29,0	1/1:6,11:19:13.62:257,14,0	1/1:19,16:37:25.78:390,26,0	1/1:4,17:22:23.71:242,24,0
chr10	55839931	.	AT	A	1285.43	PASS	AB=1.000;AC=9;AF=0.173;AN=52;BaseQRankSum=-1.811;DP=369;FS=12.175;HRun=12;HaplotypeScore=45.3672;InbreedingCoeff=0.4902;MQ=57.77;MQ0=10;MQRankSum=-0.481;QD=13.25;ReadPosRankSum=1.451;VQSLOD=2.4597;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,25:27:61.33:468,61,0	1/1:1,0:8:14.26:41,14,0	0/0:13,0:6:14.50:0,14,106	0/0:14,0:8:0.54:0,1,52	1/1:1,19:20:47.57:360,48,0	0/0:13,0:13:0:0,0,0	0/0:13,0:12:0:0,0,0	1/1:8,26:34:44.19:523,44,0	0/0:7,0:7:0.47:0,0,1	0/0:10,0:9:0.47:0,0,1	0/0:9,0:8:0.47:0,0,1	0/0:26,0:26:0.10:0,0,1	0/0:18,0:17:35.02:0,35,364	0/0:15,0:15:39.02:0,39,378	0/0:11,0:11:0:0,0,1	0/0:18,0:18:0:0,0,0	0/0:9,0:9:0:0,0,0	0/0:13,0:11:0:0,0,0	0/0:13,0:11:0:0,0,0	0/0:7,0:7:0:0,0,0	0/1:8,0:8:0.10:0,0,0	./.	0/0:6,0:6:0:0,0,0	0/0:11,0:11:0:0,0,0	0/0:9,0:9:0:0,0,0	0/0:15,0:15:0:0,0,0	0/0:13,0:13:0:0,0,1	./.
chr10	55839936	.	T	TA	461.12	PASS	AC=24;AF=0.600;AN=40;BaseQRankSum=0.576;DP=193;FS=0.776;HRun=0;HaplotypeScore=40.0234;InbreedingCoeff=0.7216;MQ=72.31;MQ0=17;MQRankSum=-0.075;QD=13.56;ReadPosRankSum=-5.419;VQSLOD=2.3824;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:63.51:0,64,463	0/0:7,0:7:20.77:0,21,139	0/0:13,0:6:17.39:0,17,166	0/0:14,0:8:16.83:0,17,120	0/0:21,0:21:50.68:0,51,372	1/1:2,0:1:2.99:24,3,0	1/1:3,0:2:5.98:47,6,0	0/0:34,0:34:99:0,102,792	1/1:0,3:3:2.99:24,3,0	1/1:2,0:1:2.99:23,3,0	1/1:2,0:1:2.98:22,3,0	1/1:6,0:6:17.87:131,18,0	0/0:16,0:15:45.10:0,45,577	0/0:15,0:15:42.58:0,43,538	1/1:3,0:3:8.99:76,9,0	1/1:1,0:1:3:25,3,0	./.	./.	./.	./.	1/1:5,0:5:14.80:100,15,0	1/1:1,0:1:2.99:24,3,0	./.	./.	./.	1/1:1,0:1:2.98:21,3,0	1/1:5,0:5:14.83:104,15,0	./.
chr10	55841222	.	GA	G	9370.66	PASS	AB=1.000;AC=27;AF=0.482;AN=56;BaseQRankSum=14.907;DP=698;FS=2.378;HRun=5;HaplotypeScore=68.0026;InbreedingCoeff=0.9525;MQ=81.31;MQ0=0;MQRankSum=-2.263;QD=29.28;ReadPosRankSum=2.300;VQSLOD=5.5358;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:87.29:0,87,1188	0/0:11,0:11:33.11:0,33,448	0/1:15,0:15:2.63:3,0,344	0/0:22,0:22:57.18:0,57,736	0/0:39,0:39:99:0,114,1559	1/1:1,27:28:75.21:851,75,0	1/1:2,16:18:42.12:476,42,0	0/0:35,0:35:93.30:0,93,1258	1/1:1,19:20:54.15:613,54,0	1/1:0,32:32:96.27:1089,96,0	1/1:0,18:18:48.14:545,48,0	0/0:26,0:26:75.25:0,75,1023	0/0:27,0:27:75.25:0,75,1022	0/0:28,0:28:78.26:0,78,1067	1/1:0,28:28:78.22:885,78,0	0/0:26,0:26:78.25:0,78,1050	0/0:33,0:33:87.28:0,87,1174	0/0:16,0:16:48.07:0,48,614	1/1:0,25:25:75.17:827,75,0	1/1:3,31:34:87.25:987,87,0	1/1:3,15:18:42.12:476,42,0	0/0:38,0:38:99:0,114,1544	0/0:30,0:30:87.29:0,87,1185	0/0:17,0:17:48.16:0,48,657	1/1:0,17:17:48.14:544,48,0	1/1:1,28:29:84.24:952,84,0	1/1:1,30:31:81.23:919,81,0	1/1:1,6:7:18.05:204,18,0
chr10	55843030	.	T	TA	16193.70	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-13.456;DP=641;FS=20.360;HRun=4;HaplotypeScore=58.5343;InbreedingCoeff=0.9998;MQ=72.30;MQ0=0;MQRankSum=-4.004;QD=36.39;ReadPosRankSum=3.889;VQSLOD=2.9063;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,105,1163	0/0:15,0:15:45.13:0,45,510	0/0:15,0:15:36.10:0,36,405	0/0:10,0:10:29.75:0,30,297	0/0:26,0:26:75.21:0,75,850	1/1:3,12:15:33.07:430,33,0	1/1:0,16:16:42.14:574,42,0	0/0:48,0:48:99:0,132,1480	1/1:1,19:20:57.19:779,57,0	1/1:0,20:20:56.98:779,57,0	1/1:1,20:21:60.20:820,60,0	1/1:4,23:27:63.21:862,63,0	0/0:22,0:22:63.16:0,63,704	0/0:23,0:23:69.16:0,69,760	1/1:5,21:26:69.14:889,69,0	1/1:1,23:24:63.21:862,63,0	1/1:2,21:23:57.63:817,58,0	1/1:1,25:26:72.24:985,72,0	1/1:1,14:15:45.15:607,45,0	1/1:4,23:27:75.16:984,75,0	1/1:1,18:19:51.17:698,51,0	1/1:2,18:20:51.17:690,51,0	1/1:1,22:23:54.16:724,54,0	1/1:0,27:28:81.27:1105,81,0	1/1:1,20:21:60.20:820,60,0	1/1:4,26:30:78.24:1049,78,0	1/1:0,31:31:87.29:1186,87,0	1/1:0,13:13:39.13:534,39,0
chr10	55844234	.	C	CA	5323	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=2.181;DP=532;FS=11.398;HRun=7;HaplotypeScore=124.9512;InbreedingCoeff=0.9853;MQ=53.80;MQ0=7;MQRankSum=-6.437;QD=24.64;ReadPosRankSum=-0.060;VQSLOD=3.2650;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:86.23:0,86,837	0/0:6,0:6:18.01:0,18,167	0/0:18,0:10:23.81:0,24,199	0/0:16,0:8:18.03:0,18,174	0/0:37,0:37:99:0,99,948	1/1:2,10:12:30.09:362,30,0	1/1:10,13:23:51.14:601,51,0	0/0:21,0:21:51.07:0,51,492	1/1:2,7:9:24.07:281,24,0	1/1:10,12:23:42.82:452,43,0	1/1:3,15:17:42.09:474,42,0	0/0:18,0:18:47.89:0,48,422	0/0:22,0:22:60.03:0,60,560	0/0:27,0:27:57.97:0,58,552	1/1:6,20:26:41.99:484,42,0	0/0:28,0:28:69.13:0,69,627	0/0:16,0:16:26.68:0,27,218	0/0:19,0:19:45.02:0,45,415	1/1:8,16:23:54.11:614,54,0	1/1:5,10:15:36.09:406,36,0	1/1:3,4:7:15.48:165,15,0	0/0:14,0:14:23.71:0,24,194	0/0:28,0:28:59.50:0,59,509	0/0:10,0:10:18.02:0,18,172	1/1:2,8:9:24.06:277,24,0	1/1:9,13:20:41.46:440,41,0	1/1:6,17:23:59.97:659,60,0	1/1:0,3:3:9.03:108,9,0
chr10	55844249	.	ACAAAAAAC	A	7198.14	PASS	AB=0.989;AC=31;AF=0.554;AN=56;BaseQRankSum=11.873;DP=488;FS=37.252;HRun=0;HaplotypeScore=181.1873;InbreedingCoeff=0.3040;MQ=51.95;MQ0=11;MQRankSum=-9.958;QD=24.65;ReadPosRankSum=2.801;VQSLOD=2.9630;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:35:56.52:0,57,1970	0/0:6,0:6:15.04:0,15,451	0/0:21,0:9:9.64:0,10,93	0/0:24,0:11:1.57:0,2,74	0/0:36,0:36:99:0,105,2774	0/1:10,0:10:42.84:179,0,43	0/1:16,0:16:37.32:216,0,37	0/0:28,0:28:64.48:0,64,863	0/1:10,0:10:15.40:229,0,15	0/1:18,0:17:73.19:163,0,73	1/1:19,0:18:18.45:420,18,0	1/1:9,5:14:39.31:586,39,0	0/0:21,0:21:57.15:0,57,1541	0/0:22,0:22:60.07:0,60,1448	0/1:18,0:17:54.38:302,0,54	1/1:16,5:21:48.04:788,48,0	1/1:14,4:18:47.77:634,48,0	1/1:13,2:15:32.94:437,33,0	0/1:24,0:23:35.57:327,0,36	1/1:13,0:13:36.80:326,37,0	0/1:8,0:8:24.33:55,0,24	1/1:5,3:8:21.03:359,21,0	1/1:7,10:17:51.11:973,51,0	1/1:8,1:9:23.88:203,24,0	1/1:8,0:7:13.41:159,13,0	0/1:20,0:18:55.71:297,0,56	0/1:19,0:19:55.42:361,0,55	1/1:6,0:6:17.87:184,18,0
chr10	55844258	.	CAAAAAAACA	C	9879.71	PASS	AB=1.000;AC=34;AF=0.607;AN=56;BaseQRankSum=10.451;DP=497;FS=27.565;HRun=0;HaplotypeScore=181.2881;InbreedingCoeff=0.4138;MQ=48.66;MQ0=15;MQRankSum=-8.872;QD=30.78;ReadPosRankSum=3.926;VQSLOD=2.6278;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:31:79.39:0,79,1829	0/0:5,0:5:12.04:0,12,520	0/0:25,0:8:14.52:0,15,159	0/1:27,0:8:10.60:11,0,51	0/0:38,0:38:99:0,102,2406	1/1:8,4:12:24.07:529,24,0	1/1:7,4:13:33.09:675,33,0	0/0:29,0:30:69.68:0,70,1286	1/1:5,5:10:24.08:568,24,0	1/1:4,10:13:31.71:577,32,0	1/1:5,11:17:45.15:1052,45,0	0/1:14,0:13:58.26:130,0,58	0/0:22,0:22:63.21:0,63,1750	0/0:24,0:24:63.21:0,63,2067	1/1:7,7:14:29.17:732,29,0	0/1:19,0:19:99:198,0,172	0/1:18,0:18:76.60:77,0,208	0/1:17,0:17:37.07:37,0,290	1/1:7,22:29:67.23:1132,67,0	1/1:3,11:14:42.10:893,42,0	1/1:4,2:7:11.93:260,12,0	0/1:8,0:8:72.57:73,0,73	0/1:20,0:20:19.34:232,0,19	0/1:8,0:8:4.86:5,0,99	1/1:3,4:9:21.07:457,21,0	1/1:8,13:18:42.08:904,42,0	1/1:4,9:17:39.13:946,39,0	1/1:2,3:7:14.04:392,14,0
chr10	55844266	.	CA	C	2619.36	PASS	AB=0.893;AC=28;AF=0.500;AN=56;BaseQRankSum=4.655;DP=466;FS=28.256;HRun=11;HaplotypeScore=130.2034;InbreedingCoeff=0.6763;MQ=47.58;MQ0=15;MQRankSum=0.037;QD=9.88;ReadPosRankSum=3.201;VQSLOD=0.7783;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:7,19:27:27.68:364,0,28	0/0:4,0:4:12.03:0,12,128	0/0:23,0:5:14.35:0,14,115	0/1:26,0:8:1.44:1,0,24	1/1:3,31:34:89.62:725,90,0	1/1:10,0:10:8.66:59,9,0	1/1:12,0:11:6.74:99,7,0	0/0:14,0:34:60.37:0,60,349	1/1:8,0:8:20.23:127,20,0	1/1:13,0:12:11.76:127,12,0	1/1:16,0:16:23.67:210,24,0	0/0:12,0:12:8.79:0,9,177	0/0:20,1:21:17.43:0,17,381	0/0:22,0:22:59.73:0,60,609	1/1:12,0:11:16.82:94,17,0	0/0:20,1:21:21.61:0,22,340	0/0:17,0:18:43.62:0,44,362	0/0:16,0:16:34.88:0,35,345	1/1:28,0:27:24.95:241,25,0	1/1:15,0:15:7.07:158,7,0	1/1:7,0:6:7.53:50,8,0	0/0:7,0:7:16.85:0,17,127	0/0:15,0:15:29.23:0,29,171	0/0:7,0:7:15:0,15,148	0/1:12,0:11:21.34:55,0,21	1/1:17,0:14:34.75:249,35,0	1/1:16,0:17:30.33:209,30,0	0/1:9,0:9:13.57:64,0,14
chr10	55844281	.	C	CA	2478.38	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=-3.695;DP=475;FS=3.612;HRun=8;HaplotypeScore=130.3446;InbreedingCoeff=0.8748;MQ=49.75;MQ0=9;MQRankSum=-3.194;QD=18.36;ReadPosRankSum=1.427;VQSLOD=2.4254;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:60.02:0,60,546	0/0:4,0:4:12.01:0,12,110	0/0:20,0:4:5.96:0,6,54	0/1:24,0:9:3.94:4,0,49	0/0:35,0:35:93.03:0,93,845	0/0:7,0:7:16.87:0,17,127	0/0:15,0:14:32.50:0,32,279	0/0:40,0:40:99:0,102,915	0/0:8,0:8:18.89:0,19,166	0/0:13,0:13:35.88:0,36,327	0/0:18,0:17:47.04:0,47,411	1/1:4,9:13:24.07:276,24,0	0/0:14,0:14:39.02:0,39,357	0/0:21,0:21:50.98:0,51,461	0/0:11,0:11:28.60:0,29,234	1/1:2,19:21:48.10:536,48,0	1/1:2,21:23:57.17:654,57,0	1/1:6,11:17:33.10:379,33,0	0/0:29,0:29:83.58:0,84,737	0/0:15,0:15:35.37:0,35,306	0/0:7,0:6:3:0,3,28	1/1:1,8:9:21.06:243,21,0	1/1:5,13:18:36.10:408,36,0	1/1:3,5:8:15.04:173,15,0	0/0:12,0:11:23.26:0,23,188	0/0:18,0:17:50.79:0,51,442	0/0:18,0:18:46.99:0,47,391	0/0:10,0:10:27.01:0,27,247
chr10	55844447	.	C	CCT	3633.86	PASS	AB=0.943;AC=14;AF=0.250;AN=56;BaseQRankSum=12.419;DP=521;FS=45.059;HRun=0;HaplotypeScore=178.0776;InbreedingCoeff=-0.0302;MQ=77.10;MQ0=0;MQRankSum=-11.830;QD=19.23;ReadPosRankSum=1.617;VQSLOD=2.1349;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:69.23:0,69,1051	0/0:9,0:9:24.08:0,24,367	0/0:15,0:15:42.09:0,42,577	0/0:17,0:17:30.01:0,30,496	0/0:18,0:18:51.16:0,51,757	0/1:16,0:16:98.82:527,0,99	1/1:4,0:4:6.02:101,6,0	0/0:37,0:37:93.29:0,93,1350	0/1:10,1:10:99:183,0,121	0/1:15,1:16:99:180,0,266	0/0:9,13:21:27.09:0,27,410	0/0:26,0:26:77.98:0,78,1135	0/0:19,0:19:54.09:0,54,738	0/0:27,0:27:81.24:0,81,1177	0/1:25,0:25:99:469,0,218	0/0:22,0:22:66.22:0,66,990	0/0:29,0:29:84.22:0,84,1208	0/0:14,0:14:39.13:0,39,597	0/1:17,0:17:73.17:73,0,483	0/1:20,0:20:99:361,0,302	0/1:14,0:14:99:119,0,325	0/0:11,0:11:33.11:0,33,505	0/0:12,0:12:33.11:0,33,505	0/0:30,0:30:84.29:0,84,1286	0/1:11,0:10:99:102,0,181	0/1:5,14:19:99:445,0,184	0/1:32,0:32:99:1027,0,185	1/1:0,0:4:3.01:47,3,0
chr10	55845458	.	AATTCTCTGAGAATTTGTTAATTATCT	A	2876.66	PASS	AC=12;AF=0.222;AN=54;BaseQRankSum=5.277;DP=575;FS=6.485;HRun=0;HaplotypeScore=378.7001;InbreedingCoeff=0.8687;MQ=72.80;MQ0=0;MQRankSum=-4.199;QD=29.66;ReadPosRankSum=1.548;VQSLOD=0.8599;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:48.16:0,48,5038	0/0:7,0:7:15.05:0,15,1503	0/0:13,0:14:9.03:0,9,252	0/0:10,0:10:3.01:0,3,121	0/0:26,0:26:54.19:0,54,5114	0/0:20,0:20:36.12:0,36,3627	0/0:18,0:18:36.12:0,36,3387	0/0:34,0:34:39.12:0,39,1554	0/0:20,0:20:45.15:0,45,4397	0/0:14,0:14:30.10:0,30,2408	0/0:28,0:28:63.20:0,63,5480	1/1:16,3:19:9.03:587,9,0	0/0:22,0:22:45.14:0,45,4065	0/0:29,0:29:69.22:0,69,6101	0/0:36,0:36:72.25:0,72,7073	1/1:20,5:25:15.05:995,15,0	./.	1/1:12,0:12:6.02:155,6,0	0/0:18,0:18:24.07:0,24,1722	0/0:19,0:19:18.06:0,18,1729	0/0:14,0:14:30.10:0,30,2570	1/1:9,4:13:12.04:797,12,0	1/1:11,1:12:9.02:254,9,0	1/1:15,1:16:6.02:253,6,0	0/0:19,0:19:33.11:0,33,3514	0/0:35,0:35:90.31:0,90,9626	0/0:40,0:40:87.30:0,87,8467	0/0:18,0:18:33.11:0,33,3628
chr10	55845578	.	TCCCAAGGCCCAGAGTGGCTGAGATCC	T	7964.28	PASS	AB=0.515;AC=13;AF=0.232;AN=56;BaseQRankSum=10.291;DP=478;FS=8.943;HRun=0;HaplotypeScore=290.4170;InbreedingCoeff=0.8328;MQ=79.07;MQ0=0;MQRankSum=-10.210;QD=99.55;ReadPosRankSum=5.149;VQSLOD=3.0232;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:32:81.24:0,81,7780	0/0:5,0:5:15.05:0,15,1507	0/0:11,0:11:33:0,33,1553	0/0:20,0:20:48.16:0,48,2463	0/0:19,0:19:48.16:0,48,5093	0/0:18,0:18:51.18:0,51,5377	0/0:28,0:28:75.23:0,75,6894	0/0:27,0:27:81.26:0,81,5922	0/0:14,1:14:30.10:0,30,3013	0/0:19,0:19:51.18:0,51,4752	0/0:17,0:17:51.18:0,51,4967	1/1:0,11:11:24.08:1559,24,0	0/0:18,0:18:51.18:0,51,5278	0/0:22,0:22:63.21:0,63,6237	0/0:12,0:12:30.10:0,30,2828	0/1:1,16:17:99:1789,0,335	1/1:1,11:8:6.02:419,6,0	1/1:1,11:12:27.09:1887,27,0	0/0:16,0:16:48.15:0,48,3467	0/0:15,0:15:45.15:0,45,4237	0/0:28,0:28:81.26:0,81,7748	1/1:1,8:9:15.05:834,15,0	1/1:1,11:12:21.07:1266,21,0	1/1:2,5:6:2.90:209,3,0	0/0:14,0:14:42.12:0,42,4425	0/0:29,0:29:78.22:0,78,7559	0/0:24,0:24:66.17:0,66,6941	0/0:8,0:8:24.08:0,24,2366
chr10	55845674	.	CT	C	1838.98	PASS	AB=0.881;AC=27;AF=0.482;AN=56;BaseQRankSum=0.907;DP=398;FS=4.690;HRun=11;HaplotypeScore=70.2234;InbreedingCoeff=0.6998;MQ=58.53;MQ0=6;MQRankSum=-0.433;QD=10.39;ReadPosRankSum=0.708;VQSLOD=3.0591;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,1:33:32.05:0,32,254	0/0:8,0:8:15.04:0,15,160	0/1:16,0:9:14.35:14,0,56	0/0:9,0:4:2.22:0,2,7	0/0:7,0:16:21.68:0,22,124	1/1:4,4:8:13.45:113,13,0	1/1:4,8:12:22.49:194,22,0	0/0:48,1:48:98.45:0,98,998	0/1:7,4:10:15.65:83,0,16	1/1:2,7:9:20.95:172,21,0	1/1:1,9:10:20.96:172,21,0	0/0:10,0:9:9.02:0,9,96	0/0:9,0:9:15.04:0,15,160	0/0:16,0:15:30.03:0,30,300	1/1:7,5:12:14.94:123,15,0	0/0:7,0:7:15.04:0,15,160	0/0:22,0:19:32.92:0,33,334	0/1:18,2:19:40.57:41,0,213	1/1:5,7:12:16.47:166,16,0	1/1:2,10:12:29.96:246,30,0	1/1:0,2:2:5.99:49,6,0	0/0:11,0:11:18.02:0,18,181	0/0:18,0:17:39.06:0,39,402	0/0:9,0:7:15.02:0,15,152	1/1:6,7:12:17.47:147,17,0	1/1:10,10:20:37.59:299,38,0	1/1:9,8:17:27.80:206,28,0	1/1:2,1:1:3:25,3,0
chr10	55845691	.	C	CTT	1596.50	PASS	AB=0.934;AC=26;AF=0.464;AN=56;BaseQRankSum=0.610;DP=451;FS=5.104;HRun=15;HaplotypeScore=71.7746;InbreedingCoeff=0.5688;MQ=49.04;MQ0=19;MQRankSum=-3.930;QD=7.13;ReadPosRankSum=-3.984;VQSLOD=-0.3178;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:31:1.86:0,2,139	0/0:4,0:3:2.91:0,3,24	0/1:13,0:3:0.90:1,0,2	0/1:7,0:2:0:0,0,0	0/0:18,0:18:4.39:0,4,41	1/1:11,2:13:13.55:167,14,0	1/1:15,2:16:23.43:214,23,0	0/0:41,0:45:28.50:0,28,215	1/1:13,2:14:23.30:215,23,0	1/1:10,2:14:17.29:156,17,0	0/1:8,1:11:20.75:59,0,21	0/1:8,0:6:0:0,0,0	0/0:9,0:8:7.61:0,8,52	0/0:16,0:15:14.62:0,15,112	1/1:12,0:12:11.93:96,12,0	0/0:10,0:10:5.76:0,6,41	0/0:30,0:23:19.90:0,20,150	0/0:24,0:23:19.10:0,19,184	1/1:15,0:14:12.46:75,12,0	1/1:11,1:13:11.32:102,11,0	0/0:3,0:4:2.29:0,2,23	0/0:13,0:12:11.86:0,12,95	0/1:16,0:17:2.69:3,0,65	0/0:16,0:11:2.73:0,3,23	0/1:13,2:16:0.20:124,0,0	1/1:12,7:20:7.18:247,7,0	1/1:16,3:20:30.66:267,31,0	1/1:7,1:7:6.27:48,6,0
chr10	55845795	.	C	CT	2192.77	PASS	AB=0.875;AC=25;AF=0.446;AN=56;BaseQRankSum=-4.210;DP=359;FS=0.493;HRun=10;HaplotypeScore=43.3779;InbreedingCoeff=0.6974;MQ=69.21;MQ0=0;MQRankSum=-0.037;QD=15.12;ReadPosRankSum=-2.680;VQSLOD=2.7447;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,1:30:21.93:0,22,384	0/0:7,0:7:20.90:0,21,165	0/0:22,0:13:20.28:0,20,143	0/1:11,0:5:3.99:4,0,16	0/0:10,0:10:26.89:0,27,212	1/1:7,8:15:39.04:379,39,0	1/1:4,10:14:5.32:246,5,0	0/0:31,0:32:58.83:0,59,458	1/1:2,8:10:18.05:192,18,0	1/1:1,7:9:24.02:244,24,0	1/1:3,3:6:9.49:97,9,0	0/0:12,0:12:26.95:0,27,221	0/0:8,0:8:23.97:0,24,197	0/0:12,0:13:28.99:0,29,227	0/1:2,3:5:8.82:84,0,9	0/0:9,0:11:22.94:0,23,178	0/0:23,0:23:59.91:0,60,491	0/0:18,0:18:38.93:0,39,320	1/1:4,7:11:0.77:185,1,0	1/1:0,9:9:20.97:199,21,0	1/1:1,7:8:12.03:128,12,0	0/0:8,0:8:14.97:0,15,122	0/0:6,0:6:11.98:0,12,99	0/0:12,0:13:28.99:0,29,227	0/1:7,0:7:14.75:48,0,15	1/1:6,13:19:36.02:344,36,0	1/1:6,11:17:4.91:214,5,0	1/1:2,2:4:3.01:32,3,0
chr10	55846217	.	GTGACAGTCC	G	376.90	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.681;DP=673;FS=0.000;HRun=0;HaplotypeScore=182.4807;InbreedingCoeff=0.8739;MQ=80.57;MQ0=0;MQRankSum=-3.774;QD=41.88;ReadPosRankSum=1.194;VQSLOD=3.3301;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,105,4652	1/1:1,8:9:15.05:465,15,0	0/0:20,0:20:57.03:0,57,2252	0/0:16,0:16:39.07:0,39,1604	0/0:18,0:18:48.16:0,48,2342	0/0:25,0:25:51.13:0,51,2282	0/0:32,0:32:93.29:0,93,4285	0/0:34,0:34:93.32:0,93,4364	0/0:21,0:21:51.18:0,51,2447	0/0:15,0:15:42.14:0,42,2060	0/0:12,0:12:33.11:0,33,1596	0/0:28,0:28:75.26:0,75,3610	0/0:32,0:32:90.31:0,90,4228	0/0:35,0:35:90.31:0,90,4087	0/0:48,0:48:99:0,135,6354	0/0:40,0:40:99:0,108,4928	0/0:39,0:39:99:0,114,5391	0/0:13,0:13:39.12:0,39,1791	0/0:23,0:23:66.21:0,66,2744	0/0:9,0:9:24.08:0,24,1009	0/0:55,0:55:99:0,153,7147	0/0:14,0:14:39.13:0,39,1722	0/0:6,0:6:15.05:0,15,662	0/0:29,0:29:81.28:0,81,3735	0/0:10,0:10:27.09:0,27,1323	0/0:22,0:22:66.23:0,66,3152	0/0:31,0:31:90.31:0,90,4220	0/0:2,0:2:6.02:0,6,294
chr10	55846419	.	CTGTG	C	709.46	PASS	AB=0.968;AC=21;AF=0.438;AN=48;BaseQRankSum=1.781;DP=347;FS=35.317;HRun=0;HaplotypeScore=58.8313;InbreedingCoeff=0.0511;MQ=35.08;MQ0=33;MQRankSum=2.330;QD=3.49;ReadPosRankSum=-2.795;VQSLOD=-0.5115;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:21:7.59:88,8,0	./.	./.	./.	./.	1/1:15,0:15:6.33:66,6,0	0/1:20,0:20:13.24:182,0,13	0/0:30,0:25:57.67:0,58,771	0/1:16,0:12:29.04:90,0,29	0/0:7,0:5:6.02:0,6,127	0/0:7,0:5:3.01:0,3,42	0/1:4,0:4:0:0,0,0	0/0:9,0:7:9.03:0,9,176	0/1:17,0:17:14.56:15,0,282	0/1:20,0:19:61.85:62,0,78	0/1:14,0:13:27.02:27,0,61	0/0:14,0:12:14.73:0,15,218	0/1:12,0:12:0.83:1,0,34	0/1:6,4:9:99:114,0,138	0/0:5,0:3:3.01:0,3,38	0/0:21,0:16:0.94:0,1,1	0/0:9,0:8:0.47:0,0,1	1/1:10,0:7:2.97:20,3,0	0/0:22,0:17:2.90:0,3,16	1/1:6,0:6:3.90:52,4,0	0/1:17,0:13:78.85:79,0,301	1/1:7,0:6:3.90:40,4,0	1/1:12,0:3:3.85:11,4,0
chr10	55846423	.	GTCTCTCTC	G	90.87	PASS	AB=0.902;AC=13;AF=0.283;AN=46;BaseQRankSum=3.958;DP=339;FS=11.562;HRun=0;HaplotypeScore=66.8270;InbreedingCoeff=0.3426;MQ=34.06;MQ0=35;MQRankSum=-0.933;QD=0.99;ReadPosRankSum=-1.074;VQSLOD=0.4358;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:17:3.28:0,3,9	./.	./.	./.	./.	1/1:15,0:15:3.96:20,4,0	0/1:18,0:18:12.20:12,0,52	0/0:32,0:26:65.46:0,65,1082	0/0:17,0:13:0.96:0,1,38	0/0:8,0:6:12:0,12,154	0/0:6,0:4:3.01:0,3,42	1/1:2,2:4:2.97:20,3,0	0/0:10,0:8:12.18:0,12,401	0/0:15,0:15:21.07:0,21,641	0/0:19,0:18:9.45:0,9,120	0/1:7,5:11:8.50:58,0,9	1/1:13,0:11:8.63:51,9,0	1/1:3,8:11:5.71:49,6,0	0/0:9,0:8:4.10:0,4,170	0/0:6,0:4:3.01:0,3,57	0/0:22,0:16:0.27:0,0,0	0/0:4,5:7:0:0,0,0	0/0:11,0:8:0:0,0,0	./.	1/1:6,0:6:0.44:1,0,0	0/0:17,0:12:23.23:0,23,387	0/0:7,0:6:3.01:0,3,48	0/1:13,0:5:0.27:0,0,14
chr10	55846439	.	CTCTCTCTCTCTCTG	C	83.86	PASS	AB=1.000;AC=21;AF=0.457;AN=46;BaseQRankSum=3.846;DP=370;FS=4.380;HRun=0;HaplotypeScore=83.5151;InbreedingCoeff=0.3156;MQ=31.26;MQ0=58;MQRankSum=-3.497;QD=0.51;ReadPosRankSum=0.524;VQSLOD=1.4636;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:15:1.61:15,2,0	./.	./.	./.	0/0:3,8:9:0:0,0,0	0/1:18,0:16:0.36:0,0,1	0/0:19,0:18:1.84:0,2,10	0/0:32,0:26:30.37:0,30,446	1/1:17,0:11:5.16:24,5,0	0/0:12,0:7:0:0,0,0	./.	1/1:5,0:3:2.99:24,3,0	0/0:11,0:8:10.98:0,11,273	0/0:14,0:14:21.05:0,21,411	1/1:21,0:19:1.96:5,2,0	1/1:10,0:10:3.90:49,4,0	1/1:16,0:10:2.28:13,2,0	0/1:12,0:12:15.66:24,0,16	0/0:13,0:10:8.79:0,9,63	1/1:7,0:4:0.47:1,0,0	0/0:29,0:19:0.30:0,0,1	0/0:12,0:5:0:0,0,0	./.	0/0:24,0:15:0:0,0,0	1/1:11,0:10:0.89:2,1,0	0/1:18,0:12:26.52:35,0,27	0/0:8,0:7:2.65:0,3,28	1/1:11,0:4:3.26:10,3,0
chr10	55846457	.	CTG	C	719.97	PASS	AB=1.000;AC=34;AF=0.680;AN=50;BaseQRankSum=1.138;DP=367;FS=15.700;HRun=0;HaplotypeScore=61.1432;InbreedingCoeff=0.2293;MQ=30.23;MQ0=77;MQRankSum=-2.815;QD=2.50;ReadPosRankSum=-0.657;VQSLOD=0.3024;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:16:2.43:13,2,0	0/0:2,0:2:2.04:0,2,6	./.	./.	1/1:11,0:10:2.04:7,2,0	1/1:18,0:16:6.85:40,7,0	1/1:20,0:17:1.19:29,1,0	1/1:21,0:16:24.70:193,25,0	1/1:24,1:17:12.75:90,13,0	1/1:8,4:5:5.83:34,6,0	0/0:4,5:7:2.96:0,3,19	0/0:5,0:3:2.04:0,2,6	0/1:11,0:8:21.83:22,0,63	0/1:11,0:10:4.05:4,0,114	1/1:17,0:16:5.72:47,6,0	1/1:9,0:9:2.77:16,3,0	0/0:17,0:10:2.92:0,3,17	0/1:12,0:10:4.25:54,0,4	1/1:11,0:7:7.66:45,8,0	1/1:10,0:6:0.95:16,1,0	0/1:33,0:22:0.01:0,0,1	0/0:12,0:5:0:0,0,0	./.	0/0:23,0:13:0:0,0,0	1/1:11,0:10:3.47:26,3,0	1/1:14,0:9:23.57:170,24,0	1/1:12,0:8:2.74:12,3,0	1/1:10,0:3:2.97:20,3,0
chr10	55846481	.	CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTT	C	257.86	PASS	AB=1.000;AC=5;AF=0.100;AN=50;BaseQRankSum=3.261;DP=408;FS=2.600;HRun=0;HaplotypeScore=186.3909;InbreedingCoeff=0.3664;MQ=34.98;MQ0=81;MQRankSum=-2.232;QD=6.29;ReadPosRankSum=-1.355;VQSLOD=2.6670;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:17:22.62:0,23,581	0/0:4,0:4:7.84:0,8,136	./.	./.	0/0:13,0:13:18.50:0,18,531	0/0:20,0:14:25.60:0,26,306	0/0:19,0:16:7.49:0,7,75	0/0:20,0:13:28.33:0,28,391	0/0:21,0:15:20.83:0,21,385	0/0:14,0:8:18.05:0,18,287	0/0:8,0:6:3.01:0,3,73	0/1:10,0:7:5.76:87,0,6	0/0:15,0:12:24.08:0,24,700	0/0:11,0:9:9.03:0,9,259	0/0:19,0:17:25.52:0,26,326	1/1:8,0:8:8.53:151,9,0	0/0:22,0:12:6.06:0,6,17	0/1:12,0:10:70.75:123,0,71	0/0:10,0:7:20.97:0,21,238	0/0:12,0:9:0:0,0,0	0/0:42,0:29:2.12:0,2,41	0/1:11,0:6:0.20:1,0,0	./.	0/0:22,0:12:0.73:0,1,2	0/0:16,0:14:12.49:0,12,184	0/0:20,0:16:42.12:0,42,705	0/0:15,0:11:20.72:0,21,234	0/0:13,0:4:8.99:0,9,90
chr10	55846517	.	CTT	C	3233.06	PASS	AB=1.000;AC=39;AF=0.722;AN=54;BaseQRankSum=-3.086;DP=366;FS=2.991;HRun=3;HaplotypeScore=66.3814;InbreedingCoeff=0.7115;MQ=58.67;MQ0=31;MQRankSum=1.914;QD=10.78;ReadPosRankSum=1.862;VQSLOD=0.7837;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:38.80:0,39,302	0/0:5,0:5:14.92:0,15,137	0/1:18,0:9:11.55:12,0,48	0/1:18,0:7:12.95:27,0,13	0/0:15,0:15:38.95:0,39,351	1/1:18,0:14:43.12:338,43,0	1/1:19,0:18:32.81:262,33,0	0/0:7,0:5:14.87:0,15,114	1/1:15,1:13:24.24:182,24,0	1/1:15,0:12:29.89:265,30,0	1/1:9,0:9:10.77:160,11,0	1/1:12,0:11:20.84:156,21,0	0/0:9,0:8:14.13:0,14,179	0/0:10,0:9:23.97:0,24,209	1/1:17,0:17:35.38:299,35,0	1/1:9,0:9:20.79:153,21,0	1/1:6,10:12:3.41:19,3,0	1/1:13,0:11:23.22:167,23,0	1/1:11,0:8:22.75:172,23,0	1/1:7,0:7:5.94:50,6,0	1/1:23,0:20:7.82:65,8,0	1/1:10,0:8:14.98:125,15,0	1/1:14,0:14:23.94:193,24,0	0/1:10,0:9:0.03:1,0,0	1/1:13,0:13:23.97:202,24,0	1/1:18,0:18:46.07:371,46,0	1/1:14,0:12:10.73:205,11,0	./.
chr10	55847145	.	A	AC	6549.98	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-15.524;DP=734;FS=1.488;HRun=4;HaplotypeScore=66.6746;InbreedingCoeff=0.9999;MQ=84.65;MQ0=0;MQRankSum=-7.664;QD=35.99;ReadPosRankSum=3.064;VQSLOD=5.2003;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,99,1110	0/0:14,0:14:33.09:0,33,374	0/0:26,0:26:63.01:0,63,688	0/0:21,0:21:53.36:0,53,579	0/0:27,0:27:75.12:0,75,813	0/0:18,0:18:54.12:0,54,592	0/0:28,0:28:78.17:0,78,854	0/0:37,0:37:96.19:0,96,1044	0/0:21,0:21:63.14:0,63,700	0/0:29,0:29:84.24:0,84,951	0/0:13,0:13:39.11:0,39,441	1/1:3,26:29:75.25:1018,75,0	0/0:28,0:28:75.21:0,75,849	0/0:49,0:49:99:0,129,1454	0/0:43,0:43:99:0,117,1324	1/1:2,37:39:99:1354,99,0	1/1:1,28:29:78.26:1061,78,0	1/1:2,23:25:69.23:944,69,0	0/0:24,0:24:60.02:0,60,650	0/0:13,0:13:36.10:0,36,408	0/0:30,0:30:75.16:0,75,835	1/1:0,22:22:57.19:779,57,0	1/1:0,19:19:51.17:698,51,0	1/1:0,19:19:51.17:698,51,0	0/0:19,0:19:54.15:0,54,613	0/0:32,0:32:87.24:0,87,978	0/0:34,0:34:90.25:0,90,1019	0/0:12,0:12:33.09:0,33,374
chr10	55847691	.	T	TTGTGTG	1896.62	PASS	AB=1.000;AC=23;AF=0.460;AN=50;BaseQRankSum=-5.340;DP=596;FS=0.744;HRun=0;HaplotypeScore=184.0803;InbreedingCoeff=0.6677;MQ=54.25;MQ0=34;MQRankSum=0.077;QD=6.54;ReadPosRankSum=-3.457;VQSLOD=2.1326;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:25,10:41:7.40:206,7,0	1/1:7,0:7:2.71:55,3,0	./.	./.	1/1:15,0:15:9.03:203,9,0	0/1:19,0:17:8.11:8,0,123	0/0:18,0:17:11.63:0,12,135	1/1:32,0:32:23.07:358,23,0	0/0:16,0:14:15.05:0,15,202	0/0:25,0:22:13.96:0,14,198	0/0:18,0:14:6.91:0,7,86	1/1:22,0:22:15.02:273,15,0	0/0:22,0:24:33.09:0,33,539	0/1:18,0:21:55.40:55,0,232	0/0:17,0:15:24.08:0,24,334	1/1:17,0:21:11.89:300,12,0	1/1:20,0:18:10.59:215,11,0	1/1:17,0:16:6.02:128,6,0	0/0:21,0:18:11.73:0,12,106	0/0:16,0:16:11.86:0,12,122	0/1:24,0:22:0:0,0,0	./.	1/1:23,0:22:6:139,6,0	1/1:27,0:27:6.02:139,6,0	0/0:22,0:18:26.67:0,27,333	0/0:26,0:21:29.78:0,30,387	0/0:25,0:24:36.11:0,36,477	0/0:9,0:9:11.71:0,12,136
chr10	55847692	.	TGTGTGTG	T	6460.04	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=12.301;DP=588;FS=7.278;HRun=0;HaplotypeScore=148.3371;InbreedingCoeff=0.9552;MQ=52.33;MQ0=34;MQRankSum=-8.806;QD=26.15;ReadPosRankSum=0.975;VQSLOD=3.8696;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:66.20:0,66,1116	0/0:7,0:7:8.92:0,9,254	0/0:29,0:13:38.80:0,39,458	0/0:16,0:7:21.03:0,21,279	0/0:15,0:15:18.30:0,18,256	1/1:3,14:17:12.80:400,13,0	1/1:2,15:17:15.01:313,15,0	0/0:31,0:31:90.26:0,90,1422	1/1:2,13:14:15.52:395,16,0	1/1:3,18:21:35.09:588,35,0	1/1:0,13:13:23.73:345,24,0	0/0:22,0:22:41.92:0,42,829	0/0:25,0:25:75.24:0,75,1883	0/0:21,0:21:48.16:0,48,1313	1/1:1,13:14:24.08:632,24,0	0/0:22,0:21:20.16:0,20,378	0/0:20,0:18:17.17:0,17,353	0/0:17,0:16:30.01:0,30,745	1/1:3,13:15:30.38:465,30,0	1/1:0,14:16:29.17:477,29,0	1/1:6,12:19:4.41:49,4,0	0/0:24,0:23:23.34:0,23,268	0/0:23,0:22:38.48:0,38,548	0/0:27,0:27:20.60:0,21,473	1/1:5,7:18:34.29:726,34,0	1/1:6,16:21:34.76:870,35,0	1/1:1,21:24:38.18:925,38,0	1/1:0,7:9:12.04:274,12,0
chr10	55848977	.	A	AGTGT	892.26	PASS	AB=1.000;AC=17;AF=0.447;AN=38;BaseQRankSum=-1.333;DP=517;FS=3.261;HRun=0;HaplotypeScore=96.3900;InbreedingCoeff=0.3095;MQ=64.20;MQ0=20;MQRankSum=-0.835;QD=4.85;ReadPosRankSum=-0.373;VQSLOD=2.0898;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	./.	0/0:15,0:16:3:0,3,27	0/0:27,0:27:8.48:0,8,74	./.	0/0:9,0:9:0:0,0,0	0/1:18,0:18:0.05:0,0,0	0/0:6,0:6:0.47:0,0,1	1/1:13,7:21:3.01:70,3,0	0/0:14,0:14:3.01:0,3,46	0/0:13,0:13:3:0,3,25	0/0:10,0:12:2.88:0,3,28	1/1:10,0:10:3.01:42,3,0	0/1:26,0:26:11.43:131,0,11	1/1:24,0:21:27.01:433,27,0	./.	./.	0/0:47,0:48:2.66:0,3,28	1/1:9,3:15:2.84:69,3,0	1/1:8,0:8:2.84:24,3,0	1/1:31,0:31:12.77:232,13,0	0/0:8,0:11:2.86:0,3,28	1/1:18,0:17:0.43:1,0,0	0/1:13,0:13:4.85:5,0,12	./.
chr10	55850971	.	CTT	C	2966.04	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=5.031;DP=613;FS=0.000;HRun=10;HaplotypeScore=129.7306;InbreedingCoeff=0.9812;MQ=78.16;MQ0=0;MQRankSum=-0.954;QD=22.82;ReadPosRankSum=6.620;VQSLOD=2.0282;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:51.15:0,51,735	0/0:6,0:6:9.03:0,9,141	0/0:28,1:26:13.68:0,14,500	0/0:17,1:17:26.52:0,27,251	0/0:37,0:38:99:0,105,1481	0/0:9,0:29:63.02:0,63,584	0/0:6,0:23:51.04:0,51,478	0/0:31,0:35:86.74:0,87,1267	0/0:13,0:19:30.04:0,30,303	0/0:3,0:24:69.09:0,69,674	0/0:5,0:20:50.99:0,51,475	1/1:2,25:28:60.08:721,60,0	0/0:22,0:23:68.66:0,69,915	0/0:22,1:23:26.71:0,27,777	0/0:15,0:24:56.90:0,57,519	1/1:0,16:17:16.17:439,16,0	1/1:3,18:21:39.09:435,39,0	1/1:3,15:18:33.07:368,33,0	0/0:11,0:19:38.98:0,39,351	0/0:3,0:22:63.04:0,63,596	0/0:5,0:22:36.04:0,36,376	1/1:3,14:17:42.11:468,42,0	1/1:1,15:16:48.13:533,48,0	1/1:4,8:13:18.04:201,18,0	0/0:4,0:18:42.03:0,42,403	0/0:11,0:31:69.09:0,69,652	0/0:6,0:23:63.02:0,63,589	0/0:8,0:14:32.94:0,33,277
chr10	55851027	.	G	GTT	11186.08	PASS	AB=0.609;AC=46;AF=0.821;AN=56;BaseQRankSum=0.697;DP=646;FS=4.865;HRun=12;HaplotypeScore=129.3423;InbreedingCoeff=0.7515;MQ=66.13;MQ0=4;MQRankSum=-2.818;QD=20.49;ReadPosRankSum=-1.465;VQSLOD=3.3324;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:5,2:24:11.06:154,0,11	1/1:1,0:6:5.92:25,6,0	0/0:22,0:14:24.64:0,25,192	0/0:25,0:20:14.63:0,15,148	1/1:6,2:34:43.07:355,43,0	1/1:15,7:23:42.96:513,43,0	1/1:7,7:14:36.07:433,36,0	0/1:18,0:37:7.98:148,0,8	1/1:5,15:21:26.03:289,26,0	1/1:15,5:19:48.02:540,48,0	1/1:11,7:19:33.02:376,33,0	1/1:21,5:26:44.59:508,45,0	0/0:34,0:33:65.84:0,66,600	0/0:19,0:19:44.88:0,45,397	1/1:16,10:27:64.52:729,65,0	1/1:13,9:25:44.82:781,45,0	1/1:15,5:20:44.39:438,44,0	1/1:18,6:29:40.28:565,40,0	1/1:14,7:20:47.31:486,47,0	1/1:21,6:27:61.21:654,61,0	1/1:10,3:17:37.67:301,38,0	1/1:15,7:24:55.40:588,55,0	1/1:5,16:21:50.65:671,51,0	1/1:2,20:23:54.12:709,54,0	1/1:8,6:14:36.74:349,37,0	1/1:14,8:24:47.73:501,48,0	1/1:10,25:35:57.84:778,58,0	1/1:5,6:11:25.89:293,26,0
chr10	55851510	.	A	AC	92.66	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-0.649;DP=621;FS=3.286;HRun=7;HaplotypeScore=74.4260;InbreedingCoeff=0.9545;MQ=76.61;MQ0=0;MQRankSum=-0.796;QD=13.24;ReadPosRankSum=1.498;VQSLOD=3.1514;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,114,1100	1/1:0,7:7:15.05:181,15,0	0/0:19,0:19:18.42:0,18,229	0/0:20,0:20:27.99:0,28,323	0/0:20,0:20:48.06:0,48,458	0/0:27,0:27:69.08:0,69,655	0/0:26,0:26:63.10:0,63,608	0/0:30,0:30:69.10:0,69,662	0/0:15,0:15:36.05:0,36,347	0/0:27,0:27:75.09:0,75,716	0/0:11,0:11:24.02:0,24,226	0/0:36,0:36:99:0,102,984	0/0:32,0:32:90.14:0,90,869	0/0:20,0:20:57.05:0,57,541	0/0:35,0:35:99:0,102,981	0/0:29,0:29:75.07:0,75,712	0/0:28,0:28:81.09:0,81,769	0/0:19,0:19:51.08:0,51,492	0/0:11,0:11:21.03:0,21,202	0/0:21,0:21:57.07:0,57,545	0/0:24,0:24:60.07:0,60,573	0/0:12,0:12:36.06:0,36,347	0/0:16,0:16:39.01:0,39,365	0/0:26,0:26:72.01:0,72,676	0/0:19,0:19:48.07:0,48,463	0/0:23,0:23:63.10:0,63,608	0/0:20,0:20:57.09:0,57,550	0/0:5,0:5:15.02:0,15,145
chr10	55851587	.	TG	T	3827.83	PASS	AB=0.882;AC=15;AF=0.268;AN=56;BaseQRankSum=7.506;DP=620;FS=4.121;HRun=9;HaplotypeScore=71.0755;InbreedingCoeff=0.8357;MQ=78.44;MQ0=1;MQRankSum=0.256;QD=21.50;ReadPosRankSum=1.370;VQSLOD=4.5267;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,1:43:59.42:0,59,1099	0/0:2,0:2:6.02:0,6,69	0/0:23,0:20:1.56:0,2,198	0/0:17,1:18:15.09:0,15,184	0/0:23,1:25:8.67:0,9,566	0/0:26,1:29:40.63:0,41,743	0/0:29,2:31:26.29:0,26,790	0/0:24,0:24:56.47:0,56,643	0/1:13,2:15:15.82:16,0,321	0/0:19,1:20:11.67:0,12,388	0/0:14,0:14:39.10:0,39,440	1/1:4,27:31:81.03:737,81,0	0/0:27,2:29:26.31:0,26,796	0/0:19,0:19:54.16:0,54,622	0/0:31,1:32:56.78:0,57,907	1/1:1,26:27:72.04:659,72,0	1/1:1,28:29:78.04:714,78,0	1/1:3,24:27:63.03:576,63,0	0/0:13,0:13:30.09:0,30,346	0/0:17,0:17:42.12:0,42,484	0/0:32,0:32:82.79:0,83,930	1/1:4,16:20:45.02:411,45,0	1/1:2,8:10:24.48:220,24,0	1/1:0,19:19:54.03:494,54,0	0/0:22,0:22:57.16:0,57,650	0/0:20,0:20:48.13:0,48,543	0/0:24,0:24:69.20:0,69,796	0/0:4,0:4:12.04:0,12,138
chr10	55851766	.	AGAGAGAGAGAGAGAGAGAGG	A	1571.98	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=0.253;DP=559;FS=22.304;HRun=0;HaplotypeScore=252.6736;InbreedingCoeff=-0.3815;MQ=55.91;MQ0=11;MQRankSum=2.118;QD=4.16;ReadPosRankSum=-7.161;VQSLOD=-0.2605;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:31,0:30:7.70:8,0,3307	0/0:11,0:11:30.06:0,30,595	0/0:13,0:3:3.66:0,4,62	0/0:22,0:10:7.34:0,7,143	0/1:23,0:22:99:124,0,973	0/1:18,0:18:59.91:60,0,1319	0/1:28,0:28:61.59:62,0,2501	1/1:6,19:24:45.31:592,45,0	0/0:20,0:20:15.05:0,15,765	0/1:24,0:24:73.73:74,0,2572	0/1:16,0:16:82.81:83,0,927	0/1:22,0:22:43.66:44,0,1563	0/0:17,0:17:46.26:0,46,1323	0/0:13,0:13:27.51:0,28,1032	0/1:21,0:20:27.24:27,0,1738	0/0:34,0:34:8.10:0,8,642	0/1:15,0:13:99:155,0,174	0/1:20,0:19:99:230,0,353	0/1:20,0:20:99:117,0,1779	0/1:11,0:11:26.87:27,0,625	0/1:35,0:35:14.91:15,0,2994	0/0:17,0:16:4.91:0,5,808	0/0:13,0:13:30.10:0,30,1119	0/1:28,0:28:38.33:38,0,1591	0/1:12,0:12:50.77:51,0,677	0/1:24,0:24:14.30:14,0,2366	0/0:21,0:20:21.54:0,22,1016	0/1:5,0:4:15.79:16,0,18
chr10	55851770	.	AGAGAGAGAGAGAGAGG	A	3213.38	PASS	AB=1.000;AC=24;AF=0.429;AN=56;BaseQRankSum=-0.582;DP=563;FS=10.416;HRun=0;HaplotypeScore=214.9441;InbreedingCoeff=-0.1975;MQ=57.00;MQ0=8;MQRankSum=-0.233;QD=7.42;ReadPosRankSum=-5.304;VQSLOD=-0.2535;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:27:29.67:30,0,2384	0/0:10,0:10:23.95:0,24,227	0/0:14,0:6:2.95:0,3,81	0/0:19,0:10:6.51:0,7,170	0/1:22,0:21:99:152,0,540	0/1:20,0:20:99:151,0,860	0/1:25,0:25:84.54:85,0,1678	1/1:20,0:19:56.95:494,57,0	0/0:21,0:21:15.05:0,15,512	0/1:25,0:25:99:126,0,1666	0/1:18,0:18:99:177,0,572	0/1:24,0:24:99:148,0,788	0/0:18,0:18:48.70:0,49,963	0/0:14,0:14:33.05:0,33,836	0/1:21,0:20:75.16:75,0,1076	0/1:37,0:37:95.03:189,0,95	1/1:17,0:15:32.85:334,33,0	1/1:14,4:17:43.73:721,44,0	0/1:20,0:20:99:142,0,1148	0/1:12,0:12:73.78:74,0,379	0/1:36,0:36:99:143,0,1773	0/1:17,0:16:1.35:1,0,323	0/0:13,0:13:10.15:0,10,585	0/1:29,0:29:99:109,0,890	0/1:16,0:16:99:143,0,356	0/1:25,0:25:46.18:46,0,1295	0/0:21,0:20:21.54:0,22,676	1/1:3,0:2:5.99:48,6,0
chr10	55851774	.	AGAGAGAGAGAGG	A	4656.12	PASS	AB=0.997;AC=26;AF=0.464;AN=56;BaseQRankSum=-0.112;DP=564;FS=16.307;HRun=0;HaplotypeScore=180.1505;InbreedingCoeff=-0.1805;MQ=59.16;MQ0=8;MQRankSum=-1.745;QD=10.42;ReadPosRankSum=-1.778;VQSLOD=2.5977;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:26:55.66:56,0,1494	0/0:8,0:8:20.93:0,21,170	0/0:16,0:9:11.77:0,12,170	0/0:18,0:11:9.52:0,10,210	0/1:23,0:23:99:242,0,208	0/1:22,0:22:99:195,0,436	0/1:25,0:25:99:140,0,913	1/1:23,0:22:64.99:550,65,0	0/0:21,0:21:12.01:0,12,260	0/1:26,0:26:99:247,0,866	0/1:19,0:19:99:222,0,271	0/1:22,1:23:99:305,0,182	0/0:19,0:19:47.99:0,48,604	0/0:13,0:13:33.04:0,33,581	0/1:22,0:21:99:123,0,463	1/1:2,28:30:11.39:433,11,0	1/1:14,0:13:32.84:265,33,0	1/1:18,0:17:49.27:576,49,0	0/1:20,0:20:99:145,0,542	0/1:13,0:13:96.73:97,0,168	0/1:35,0:35:99:178,0,756	0/1:19,0:18:11.36:174,0,11	0/1:14,0:14:51.39:109,0,51	0/1:29,0:29:99:183,0,296	0/1:16,0:16:81.51:175,0,82	0/1:26,0:26:99:193,0,469	0/0:22,0:21:18.51:0,19,323	1/1:3,0:2:5.99:48,6,0
chr10	55851778	.	AGAGAGAGG	A	6812.07	PASS	AB=0.996;AC=35;AF=0.625;AN=56;BaseQRankSum=0.977;DP=547;FS=20.910;HRun=0;HaplotypeScore=136.4136;InbreedingCoeff=0.3018;MQ=64.00;MQ0=6;MQRankSum=-1.102;QD=15.27;ReadPosRankSum=3.760;VQSLOD=2.4250;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:25:99:127,0,741	0/0:8,0:8:20.96:0,21,176	0/0:20,0:13:16.88:0,17,264	0/0:21,0:14:18.53:0,19,310	0/1:22,0:22:13.15:341,0,13	0/1:21,0:21:46.04:278,0,46	0/1:22,0:22:99:150,0,300	1/1:25,0:25:71.97:629,72,0	0/0:21,0:21:9.46:0,9,88	0/1:26,0:26:99:345,0,276	0/1:18,0:18:22.07:253,0,22	1/1:18,2:20:47.38:576,47,0	0/0:18,0:18:41.49:0,41,397	0/0:13,0:13:30.84:0,31,397	1/1:22,0:21:36.04:301,36,0	1/1:29,0:29:11.84:266,12,0	1/1:14,0:13:32.83:258,33,0	1/1:18,0:17:46.68:483,47,0	0/1:19,0:19:12.09:240,0,12	1/1:12,0:12:20.97:175,21,0	1/1:32,0:32:49:412,49,0	1/1:16,0:16:29.98:268,30,0	1/1:11,0:11:26.98:280,27,0	1/1:27,0:27:45.36:368,45,0	1/1:14,2:16:36.01:429,36,0	0/1:23,1:24:30.39:468,0,30	0/1:20,0:19:31.04:44,0,31	1/1:6,0:5:14.97:122,15,0
chr10	55851780	.	AGAGAGG	A	7955.26	PASS	AB=1.000;AC=42;AF=0.750;AN=56;BaseQRankSum=0.005;DP=538;FS=4.831;HRun=0;HaplotypeScore=114.6254;InbreedingCoeff=0.5838;MQ=66.10;MQ0=6;MQRankSum=-1.412;QD=17.76;ReadPosRankSum=2.329;VQSLOD=3.9250;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:25:99:172,0,407	0/0:8,0:8:20.96:0,21,176	0/0:24,0:17:28.52:0,29,392	0/0:21,0:14:18.53:0,19,310	1/1:21,0:21:36.04:402,36,0	1/1:20,0:20:23.94:343,24,0	0/1:23,0:23:35.79:273,0,36	1/1:27,0:27:77.98:686,78,0	0/0:3,18:21:0.47:0,0,1	0/1:25,0:25:24.51:388,0,25	1/1:19,0:19:41.93:345,42,0	1/1:19,0:19:51:505,51,0	0/0:16,0:16:41.40:0,41,341	0/1:14,0:14:2.10:2,0,310	1/1:20,0:19:47.90:527,48,0	1/1:29,0:29:12:211,12,0	1/1:14,0:13:32.83:258,33,0	1/1:18,0:17:46.68:441,47,0	1/1:4,14:18:41.91:398,42,0	1/1:11,0:11:23.97:200,24,0	1/1:27,0:27:60.42:510,60,0	1/1:16,0:16:35.96:301,36,0	1/1:11,0:11:26.97:250,27,0	1/1:24,0:24:45.36:368,45,0	1/1:15,0:15:36.03:409,36,0	1/1:25,0:25:65.08:705,65,0	1/1:7,13:19:4.71:140,5,0	1/1:6,0:5:14.97:122,15,0
chr10	55851892	.	TG	T	6300.44	PASS	AB=0.800;AC=27;AF=0.482;AN=56;BaseQRankSum=-4.198;DP=619;FS=4.939;HRun=8;HaplotypeScore=81.6709;InbreedingCoeff=0.9303;MQ=81.45;MQ0=0;MQRankSum=-3.225;QD=22.66;ReadPosRankSum=3.447;VQSLOD=5.5402;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:93.24:0,93,1077	0/1:6,2:8:7.97:8,0,180	0/0:33,0:33:77.58:0,78,847	0/0:18,0:16:37.74:0,38,369	0/0:26,0:26:63.19:0,63,758	1/1:3,10:13:30.04:290,30,0	1/1:0,13:13:39.06:377,39,0	0/0:34,0:34:90.23:0,90,1044	1/1:5,13:18:39.06:377,39,0	1/1:9,21:30:60.08:579,60,0	1/1:2,12:14:30.05:289,30,0	0/0:5,0:28:68.84:0,69,369	0/0:23,2:25:11.25:0,11,686	0/0:22,0:22:60.11:0,60,670	1/1:2,22:24:57.09:550,57,0	0/0:1,0:25:63.34:0,63,333	0/0:3,0:26:51.75:0,52,263	0/0:2,0:21:46:0,46,234	1/1:7,15:22:48.05:457,48,0	1/1:3,19:22:51.07:492,51,0	1/1:0,26:26:66.11:637,66,0	0/0:8,0:20:28.84:0,29,157	0/0:4,0:10:14.38:0,14,73	0/0:5,0:21:46.10:0,46,255	1/1:0,15:15:42.07:405,42,0	1/1:7,24:31:75.01:711,75,0	1/1:2,30:32:93.15:897,93,0	1/1:2,8:10:24.03:231,24,0
chr10	55851900	.	GT	G	1002.12	PASS	AB=0.984;AC=19;AF=0.339;AN=56;BaseQRankSum=4.215;DP=592;FS=2.360;HRun=1;HaplotypeScore=96.9720;InbreedingCoeff=0.5220;MQ=83.08;MQ0=0;MQRankSum=-3.069;QD=3.98;ReadPosRankSum=5.938;VQSLOD=0.6501;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,105,1356	0/0:8,0:8:11.59:0,12,207	0/0:33,0:33:79.72:0,80,1046	0/0:19,1:18:42.59:0,43,492	0/0:25,0:25:75.14:0,75,935	1/1:10,0:10:21.17:77,21,0	0/1:15,0:15:14.87:53,0,15	0/0:33,0:33:99:0,99,1352	0/1:15,1:16:5.08:68,0,5	0/1:21,0:21:1.16:30,0,1	0/1:16,0:16:62.46:102,0,62	0/0:28,0:28:75.38:0,75,489	0/0:26,0:26:64.81:0,65,866	0/0:20,0:20:54.17:0,54,750	0/1:26,0:26:23.56:64,0,24	0/0:26,0:26:65.37:0,65,431	0/0:21,0:21:52.77:0,53,311	0/0:20,0:20:52.90:0,53,322	0/1:17,1:18:20.12:46,0,20	1/1:19,0:19:32.80:121,33,0	0/1:28,0:28:3.38:63,0,3	0/0:14,0:14:32.23:0,32,218	0/0:8,0:8:17.51:0,18,106	0/0:22,0:22:61.98:0,62,423	1/1:15,0:15:27.18:98,27,0	1/1:27,1:28:12.69:152,13,0	1/1:31,1:32:50.46:283,50,0	1/1:8,0:8:14.41:39,14,0
chr10	55852903	.	CT	C	618.95	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=0.960;DP=593;FS=0.774;HRun=9;HaplotypeScore=66.6670;InbreedingCoeff=0.9567;MQ=64.50;MQ0=7;MQRankSum=-0.931;QD=17.68;ReadPosRankSum=-3.705;VQSLOD=2.8257;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:90.20:0,90,1011	0/0:10,0:10:30.09:0,30,346	0/0:12,0:11:21.06:0,21,240	0/0:7,0:6:11.87:0,12,118	0/0:24,0:24:63.16:0,63,706	0/0:28,0:29:84.08:0,84,949	0/0:24,0:24:63.10:0,63,696	1/1:9,26:35:78.01:714,78,0	0/0:16,0:15:36.11:0,36,415	0/0:26,0:26:63.15:0,63,706	0/0:10,0:10:21.05:0,21,232	0/0:16,0:16:36.07:0,36,400	0/0:18,0:18:39.12:0,39,450	0/0:28,0:28:72.19:0,72,813	0/0:24,0:24:54.16:0,54,623	0/0:27,0:27:57.17:0,57,658	0/0:36,0:36:84.17:0,84,939	0/0:22,0:22:51.15:0,51,587	0/0:17,0:16:39.11:0,39,442	0/0:12,0:12:33.04:0,33,356	0/0:26,0:24:62.98:0,63,706	0/0:13,0:13:35.90:0,36,380	0/0:20,0:19:51.11:0,51,572	0/0:32,0:31:85.09:0,85,957	0/0:16,0:16:39.12:0,39,450	0/0:27,0:27:69.16:0,69,781	0/0:24,0:22:48.05:0,48,514	0/0:8,0:8:21.06:0,21,242
chr10	55853057	.	AAAAAAAGAAAAAAG	A	12005.43	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=9.295;DP=488;FS=7.274;HRun=0;HaplotypeScore=190.4780;InbreedingCoeff=0.9648;MQ=58.90;MQ0=6;MQRankSum=-10.017;QD=58.56;ReadPosRankSum=2.099;VQSLOD=4.0320;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:63.21:0,63,4164	0/0:7,0:7:15.52:0,16,540	0/0:23,0:12:11.69:0,12,108	0/0:34,0:13:11.21:0,11,326	0/0:29,0:29:75.24:0,75,4617	1/1:4,18:22:51.18:2004,51,0	1/1:1,5:6:9.03:354,9,0	0/0:25,0:25:48.15:0,48,2754	1/1:0,13:13:30.06:1080,30,0	1/1:4,12:16:36.07:1217,36,0	1/1:5,13:18:30.06:1081,30,0	0/0:13,0:13:24.03:0,24,1095	0/0:16,0:16:24.54:0,25,1308	0/0:15,0:15:33.09:0,33,1915	1/1:7,7:14:17.98:511,18,0	0/0:16,0:15:37.68:0,38,1671	0/0:17,0:17:48.16:0,48,2226	0/0:27,0:27:58.43:0,58,3117	1/1:8,6:14:18.04:428,18,0	1/1:8,21:29:57.09:1945,57,0	1/1:7,6:13:12.04:449,12,0	0/0:11,0:11:23.82:0,24,904	0/0:11,0:12:23.55:0,24,995	0/0:12,0:12:24.08:0,24,1330	1/1:5,11:16:18.02:602,18,0	1/1:8,15:23:42.06:1274,42,0	1/1:3,8:11:15.05:589,15,0	1/1:0,10:10:12.04:471,12,0
chr10	55853063	.	AG	A	2259.92	PASS	AB=1.000;AC=31;AF=0.554;AN=56;BaseQRankSum=11.372;DP=472;FS=8.166;HRun=1;HaplotypeScore=110.8671;InbreedingCoeff=0.1674;MQ=56.48;MQ0=7;MQRankSum=-4.882;QD=7.34;ReadPosRankSum=3.267;VQSLOD=0.7040;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:72.12:0,72,811	1/1:2,4:6:13.37:94,13,0	0/0:23,0:9:0.83:0,1,84	0/0:30,2:10:9.15:0,9,111	0/0:30,0:30:90.11:0,90,980	0/1:22,0:22:50.33:147,0,50	0/1:6,0:6:12.69:25,0,13	0/0:23,0:23:69.05:0,69,727	1/1:13,0:13:24.70:109,25,0	0/1:15,0:15:69.75:77,0,70	0/1:17,0:17:69.92:70,0,98	1/1:12,1:13:19.91:176,20,0	0/0:16,0:16:45.03:0,45,453	0/0:14,0:14:39.06:0,39,437	0/1:12,0:12:22.69:23,0,126	1/1:15,2:16:21.32:240,21,0	1/1:14,5:19:43.98:378,44,0	1/1:28,2:30:55.80:367,56,0	0/1:10,0:10:8.41:8,0,63	0/1:27,0:27:99:129,0,125	0/1:11,0:11:11.17:11,0,83	1/1:8,1:9:14.39:101,14,0	1/1:11,0:11:16.85:166,17,0	1/1:13,0:13:21.52:134,22,0	0/1:15,0:15:28.33:28,0,109	0/1:21,0:21:80.36:80,0,99	0/1:11,0:11:37.93:38,0,57	1/1:10,0:10:10.98:48,11,0
chr10	55853382	.	GA	G	4804.23	PASS	AB=0.839;AC=32;AF=0.571;AN=56;BaseQRankSum=8.262;DP=651;FS=0.335;HRun=13;HaplotypeScore=81.5047;InbreedingCoeff=0.6051;MQ=69.73;MQ0=0;MQRankSum=1.865;QD=10.97;ReadPosRankSum=0.829;VQSLOD=4.5516;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,2:32:43.02:0,43,694	0/0:1,0:6:17.21:0,17,98	0/1:14,1:14:16.44:16,0,25	0/1:14,1:15:9.42:9,0,83	0/0:23,3:28:30.95:0,31,588	1/1:2,16:20:48.81:340,49,0	1/1:7,16:24:46.73:334,47,0	1/1:8,33:44:72.28:664,72,0	1/1:2,13:16:37.82:269,38,0	1/1:10,20:31:35.49:413,35,0	1/1:5,16:23:42.77:294,43,0	0/0:23,0:23:50.92:0,51,449	0/0:20,2:23:16.04:0,16,455	0/0:25,1:26:44.16:0,44,572	1/1:7,17:27:21.63:294,22,0	0/0:31,2:33:31.15:0,31,598	0/1:23,3:26:5.65:6,0,431	0/1:17,4:25:22.15:22,0,400	1/1:7,12:21:18.13:263,18,0	1/1:2,14:16:38.77:284,39,0	0/1:8,14:23:14.58:225,0,15	0/0:16,0:16:33:0,33,311	0/1:13,3:15:4.90:5,0,255	0/0:24,1:26:34.17:0,34,489	1/1:1,12:14:31.86:225,32,0	1/1:7,17:25:41.61:362,42,0	1/1:6,31:37:31.09:555,31,0	1/1:5,13:19:31.79:225,32,0
chr10	55853546	.	A	ACC	1049.44	PASS	AB=0.603;AC=17;AF=0.304;AN=56;BaseQRankSum=-6.029;DP=479;FS=8.190;HRun=9;HaplotypeScore=83.7450;InbreedingCoeff=0.6607;MQ=82.51;MQ0=0;MQRankSum=-0.758;QD=6.14;ReadPosRankSum=-1.053;VQSLOD=-0.6467;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:15:3.88:27,4,0	0/0:10,0:10:23.86:0,24,187	0/0:28,0:22:34.94:0,35,270	0/0:11,0:10:9.46:0,9,92	1/1:4,0:6:5.96:80,6,0	0/0:24,0:24:59.64:0,60,461	0/0:23,0:23:44.71:0,45,347	0/1:19,0:36:8.29:8,0,13	0/0:7,0:7:17.88:0,18,133	0/0:15,0:15:26.86:0,27,221	0/0:10,0:10:17.91:0,18,147	1/1:3,8:12:6.48:72,6,0	0/0:12,0:12:33.04:0,33,339	0/0:22,0:22:57.11:0,57,594	0/0:16,0:16:25.94:0,26,188	0/1:5,17:22:9.06:127,0,9	1/1:4,22:27:21.07:305,21,0	0/1:4,4:16:36.85:193,0,37	0/0:27,0:27:77.26:0,77,561	0/0:12,0:12:32.55:0,33,239	0/0:12,0:12:26.81:0,27,200	1/1:1,4:6:8.52:101,9,0	1/1:8,7:15:17.46:226,17,0	1/1:7,8:15:6.02:92,6,0	0/0:20,0:20:59.61:0,60,479	0/0:16,0:16:30.68:0,31,221	0/0:26,0:26:59.62:0,60,453	0/0:17,0:17:41.65:0,42,294
chr10	55853555	.	CA	C	4531	PASS	AB=1.000;AC=33;AF=0.589;AN=56;BaseQRankSum=1.173;DP=486;FS=4.879;HRun=9;HaplotypeScore=63.3182;InbreedingCoeff=0.8223;MQ=81.12;MQ0=0;MQRankSum=0.557;QD=16.30;ReadPosRankSum=6.504;VQSLOD=4.9951;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:15:8.92:67,9,0	1/1:1,9:10:18.01:164,18,0	0/0:25,0:19:5.27:0,5,119	0/0:12,0:10:3.16:0,3,37	1/1:11,0:11:2.60:40,3,0	1/1:4,18:22:48.02:439,48,0	1/1:3,15:18:36.02:329,36,0	0/0:29,0:30:41.97:0,42,339	1/1:1,10:11:15.01:137,15,0	1/1:3,11:14:32.85:270,33,0	1/1:2,9:11:17.90:147,18,0	0/1:13,0:14:2.82:3,0,109	0/0:15,1:16:5.58:0,6,271	0/0:23,0:23:60.13:0,60,652	1/1:0,16:16:26.74:246,27,0	0/0:21,1:22:2.54:0,3,194	0/0:32,0:32:50.76:0,51,397	0/0:19,0:18:38.84:0,39,319	1/1:4,24:28:72:646,72,0	1/1:3,13:16:35.72:290,36,0	1/1:1,12:13:24.01:219,24,0	0/0:9,0:9:22.19:0,22,174	0/0:11,0:11:21.09:0,21,151	0/0:9,0:9:11.92:0,12,89	1/1:9,12:21:42.01:380,42,0	1/1:3,13:16:38.90:332,39,0	1/1:4,21:25:47.95:438,48,0	1/1:0,17:17:42.02:384,42,0
chr10	55857231	.	C	CTTT	4319.53	PASS	AB=0.568;AC=39;AF=0.696;AN=56;BaseQRankSum=6.123;DP=635;FS=9.603;HRun=11;HaplotypeScore=119.2089;InbreedingCoeff=0.3363;MQ=72.88;MQ0=0;MQRankSum=-3.338;QD=7.62;ReadPosRankSum=2.726;VQSLOD=0.9722;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,0:30:19.94:43,20,0	0/1:1,0:10:0.66:5,0,1	0/0:13,0:13:20.99:0,21,216	0/0:8,0:10:19.98:0,20,195	1/1:3,0:19:25.19:87,25,0	0/1:6,0:25:12.09:20,0,12	0/1:8,0:23:11.37:11,0,49	1/1:31,2:44:69.46:1001,69,0	1/1:5,0:18:11.21:24,11,0	1/1:3,0:33:33.27:163,33,0	1/1:2,0:15:13.73:74,14,0	1/1:5,1:36:61.04:493,61,0	0/0:24,0:24:54.06:0,54,605	0/0:21,0:21:45.08:0,45,526	0/1:8,0:25:38.41:39,0,38	1/1:5,0:40:78.32:598,78,0	1/1:4,0:21:28.14:209,28,0	1/1:2,0:16:35.86:275,36,0	0/1:5,0:19:47.38:80,0,47	0/1:3,0:17:23.28:60,0,23	0/1:4,0:13:2.45:2,0,29	1/1:1,0:16:38.76:287,39,0	1/1:3,1:17:32.90:275,33,0	1/1:1,1:23:55.08:454,55,0	0/1:4,0:26:7.15:26,0,7	0/1:6,0:28:5.89:27,0,6	1/1:3,0:40:12.78:44,13,0	1/1:0,0:12:9.97:22,10,0
chr10	55860192	.	CGTGT	C	2225.02	PASS	AB=0.858;AC=12;AF=0.231;AN=52;BaseQRankSum=3.316;DP=801;FS=1.167;HRun=0;HaplotypeScore=139.7468;InbreedingCoeff=0.2217;MQ=63.21;MQ0=16;MQRankSum=-0.088;QD=7.97;ReadPosRankSum=1.756;VQSLOD=2.3774;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:46:24.68:0,25,579	0/0:10,0:11:14.38:0,14,162	./.	./.	0/0:10,0:12:3.01:0,3,52	0/0:20,0:21:32.39:0,32,577	0/0:32,0:33:26.83:0,27,493	0/1:29,0:29:0:0,0,0	0/0:19,0:20:25.58:0,26,394	0/0:23,0:25:29.77:0,30,549	0/0:9,0:9:12.04:0,12,232	0/1:35,3:38:38.48:230,0,38	0/0:35,0:32:8:0,8,1068	0/0:28,0:28:8.03:0,8,953	0/0:40,1:40:25.26:0,25,1261	0/1:30,15:45:41.32:394,0,41	0/1:28,9:37:32.48:473,0,32	0/1:17,12:30:60.56:318,0,61	0/0:22,0:24:20.46:0,20,169	0/0:11,0:11:5.75:0,6,56	0/0:70,0:71:51.34:0,51,707	1/1:16,2:18:2.96:47,3,0	1/1:10,2:11:0.47:1,0,0	1/1:19,22:41:56.98:887,57,0	0/0:16,0:16:18.03:0,18,315	0/1:27,0:29:12.17:12,0,402	0/0:16,0:17:14.79:0,15,265	0/0:8,0:7:6.02:0,6,133
chr10	55869245	.	A	AAT	46.01	PASS	AB=0.551;AC=2;AF=0.036;AN=56;BaseQRankSum=0.603;DP=643;FS=3.819;HRun=0;HaplotypeScore=117.1746;InbreedingCoeff=-0.0286;MQ=70.49;MQ0=0;MQRankSum=0.045;QD=1.64;ReadPosRankSum=-4.960;VQSLOD=0.4332;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,99,1419	0/1:2,1:10:23.29:120,0,23	0/0:19,0:18:34.35:0,34,496	0/0:13,0:10:22.70:0,23,247	0/0:26,0:26:77.90:0,78,1016	0/0:5,0:23:42.80:0,43,205	0/0:0,0:22:42.70:0,43,148	0/0:30,0:29:84.13:0,84,1196	0/0:0,0:16:11.22:0,11,73	0/0:8,0:25:6.28:0,6,166	0/1:3,0:18:0.78:1,0,128	0/0:4,0:35:65.80:0,66,279	0/0:17,0:18:54.13:0,54,744	0/0:21,0:22:62.55:0,63,942	0/0:1,0:31:54.95:0,55,208	0/0:7,0:36:71.94:0,72,469	0/0:7,0:29:42.93:0,43,287	0/0:1,0:25:43.86:0,44,178	0/0:9,0:23:41.01:0,41,298	0/0:4,0:22:48.13:0,48,221	0/0:4,0:20:35.38:0,35,172	0/0:5,0:26:61.76:0,62,288	0/0:6,0:26:47.63:0,48,237	0/0:4,0:19:42.13:0,42,178	0/0:2,0:15:27.47:0,27,113	0/0:3,0:21:44.43:0,44,250	0/0:6,0:28:30.23:0,30,266	0/0:1,0:9:17.70:0,18,77
chr10	55869571	.	AACACCAGAATTAGCTGATCAGTTAAG	A	744.63	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.408;DP=716;FS=4.911;HRun=0;HaplotypeScore=452.2035;InbreedingCoeff=0.9367;MQ=81.67;MQ0=0;MQRankSum=-3.400;QD=82.74;ReadPosRankSum=1.945;VQSLOD=1.8722;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,111,12828	1/1:5,4:9:12.04:831,12,0	0/0:16,0:16:40.69:0,41,2681	0/0:22,0:23:59.34:0,59,3347	0/0:17,0:17:51.16:0,51,4781	0/0:25,0:25:60.21:0,60,6752	0/0:20,0:20:57.20:0,57,5224	0/0:35,0:35:99:0,99,7951	0/0:28,0:28:78.27:0,78,8460	0/0:23,0:23:60.21:0,60,6723	0/0:9,0:9:24.08:0,24,2858	0/0:45,0:45:99:0,123,13460	0/0:33,0:33:90.31:0,90,9558	0/0:32,0:32:87.30:0,87,9366	0/0:41,0:41:99:0,117,12565	0/0:39,0:39:99:0,108,12195	0/0:46,0:46:99:0,126,13548	0/0:19,0:19:51.15:0,51,5122	0/0:15,0:15:39.13:0,39,3497	0/0:22,0:22:63.22:0,63,7281	0/0:33,0:33:90.31:0,90,9429	0/0:22,0:22:63.22:0,63,7228	0/0:11,0:11:33.11:0,33,3481	0/0:31,0:31:90.31:0,90,8796	0/0:17,0:17:48.16:0,48,5177	0/0:24,0:24:72.25:0,72,7195	0/0:40,0:40:99:0,117,11866	0/0:4,0:4:12.04:0,12,1455
chr10	55872475	.	GCTTCCCTTCC	G	6099.33	PASS	AB=0.943;AC=21;AF=0.375;AN=56;BaseQRankSum=7.434;DP=834;FS=23.338;HRun=0;HaplotypeScore=232.9271;InbreedingCoeff=0.5790;MQ=63.76;MQ0=12;MQRankSum=-8.598;QD=13.61;ReadPosRankSum=2.482;VQSLOD=1.7212;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:22,16:37:15.05:345,15,0	0/0:7,0:7:6.02:0,6,191	0/1:49,0:37:0:0,0,0	0/0:37,0:17:3.01:0,3,86	1/1:12,14:26:8.92:78,9,0	0/1:19,0:33:51.83:52,0,627	0/1:36,1:36:36.61:37,0,1426	0/0:41,0:41:30.56:0,31,835	0/0:28,0:28:33.09:0,33,944	0/0:19,0:19:23.93:0,24,667	0/0:17,0:16:18.03:0,18,487	1/1:11,42:53:93.18:2495,93,0	0/0:39,0:39:81.23:0,81,3219	0/0:44,0:43:72.23:0,72,3122	0/1:37,0:36:8.83:9,0,1599	1/1:19,36:55:57.20:1582,57,0	1/1:15,9:24:3.01:89,3,0	0/1:12,5:15:4.94:409,0,5	0/0:14,0:13:6.02:0,6,186	0/0:21,0:21:27.09:0,27,1069	0/0:45,0:45:36.13:0,36,791	1/1:12,8:20:21:517,21,0	1/1:13,17:30:21.81:308,22,0	1/1:15,14:28:5.93:179,6,0	0/0:16,0:16:27.08:0,27,839	0/0:24,0:24:39.60:0,40,1514	0/0:21,0:21:24.03:0,24,623	0/0:12,0:12:9.01:0,9,183
chr10	55874412	.	CTCTCTG	C	3192.10	PASS	AB=0.593;AC=27;AF=0.500;AN=54;BaseQRankSum=11.998;DP=756;FS=3.713;HRun=0;HaplotypeScore=169.0624;InbreedingCoeff=0.8368;MQ=52.58;MQ0=25;MQRankSum=-3.842;QD=9.33;ReadPosRankSum=-2.716;VQSLOD=2.5395;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:39:13.86:0,14,165	1/1:9,1:9:5.98:79,6,0	./.	0/0:17,0:2:3.01:0,3,61	0/0:9,0:23:6.41:0,6,42	1/1:13,14:25:6.41:41,6,0	1/1:13,12:24:11.87:80,12,0	0/0:52,0:48:75.21:0,75,1704	1/1:6,17:22:18.06:290,18,0	1/1:12,25:34:63.20:1102,63,0	1/1:10,15:25:10.84:66,11,0	0/0:33,0:33:69.23:0,69,2085	0/0:38,0:37:81.28:0,81,2495	0/0:23,0:22:51.18:0,51,1514	1/1:12,30:41:5.33:57,5,0	0/0:37,1:38:30.37:0,30,2447	0/0:27,0:27:52.44:0,52,1532	0/0:20,0:20:45.13:0,45,1196	1/1:12,4:13:12.04:233,12,0	1/1:4,14:18:11.10:83,11,0	0/1:10,22:32:0.05:0,0,0	0/0:24,0:24:51.15:0,51,1224	0/0:24,0:24:45.15:0,45,1266	0/0:46,0:45:80.36:0,80,2965	1/1:8,12:20:2.82:20,3,0	1/1:11,18:29:48.14:874,48,0	1/1:9,17:26:15.01:254,15,0	1/1:4,8:11:14.97:216,15,0
chr10	55874416	.	CTG	C	367.57	PASS	AB=0.959;AC=7;AF=0.130;AN=54;BaseQRankSum=11.406;DP=736;FS=1.843;HRun=0;HaplotypeScore=132.2261;InbreedingCoeff=-0.1397;MQ=52.55;MQ0=22;MQRankSum=-4.392;QD=2.23;ReadPosRankSum=-0.493;VQSLOD=2.6008;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:39.40:0,39,561	0/1:6,4:9:14.43:32,0,14	./.	0/0:14,0:1:3.01:0,3,46	0/0:24,0:23:23.80:0,24,355	0/0:26,0:24:33.08:0,33,528	0/0:22,0:21:38.95:0,39,567	0/0:55,0:51:99:0,150,2402	0/1:22,0:21:6.95:7,0,244	0/1:36,0:33:99:248,0,227	0/0:25,0:25:31.36:0,31,474	0/0:31,0:31:87.28:0,87,1608	0/0:39,0:38:99:0,108,1934	0/0:24,0:23:69.17:0,69,1184	0/0:42,0:41:35.11:0,35,517	0/0:37,0:37:99:0,102,1844	0/0:27,0:27:57.30:0,57,1173	0/0:20,0:20:30.74:0,31,867	0/1:15,0:12:38.81:39,0,281	0/0:16,0:16:18.05:0,18,236	0/1:30,0:30:0.59:1,0,157	0/0:24,0:24:69.11:0,69,1158	0/0:22,0:22:60.18:0,60,1058	0/0:44,0:43:99:0,120,2193	0/0:21,0:21:20.97:0,21,311	0/1:26,0:26:99:118,0,334	0/1:26,0:26:41.85:42,0,365	0/0:11,1:11:3.24:0,3,146
chr10	55874919	.	A	AAAAC	688.76	PASS	AB=0.571;AC=1;AF=0.018;AN=56;BaseQRankSum=-4.310;DP=625;FS=1.114;HRun=0;HaplotypeScore=102.7773;InbreedingCoeff=0.0721;MQ=63.05;MQ0=0;MQRankSum=1.763;QD=43.05;ReadPosRankSum=0.456;VQSLOD=3.7617;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:59.92:0,60,1141	0/1:4,12:16:12.52:763,0,13	0/0:26,0:23:18.06:0,18,252	0/0:23,0:18:18.05:0,18,257	0/0:33,0:34:81.74:0,82,1244	0/0:23,0:24:39.13:0,39,600	0/0:23,0:24:54.17:0,54,821	0/0:28,0:28:33.11:0,33,476	0/0:19,0:19:36.12:0,36,548	0/0:20,0:20:42.14:0,42,648	0/0:15,0:15:33.11:0,33,522	0/0:16,0:16:30.09:0,30,441	0/0:28,0:29:63.21:0,63,977	0/0:18,0:18:39.13:0,39,573	0/0:26,0:27:57.19:0,57,903	0/0:18,0:18:39.13:0,39,597	0/0:29,0:29:66.22:0,66,1021	0/0:25,0:25:22.88:0,23,607	0/0:22,0:21:21.07:0,21,319	0/0:17,0:17:30.10:0,30,474	0/0:17,0:16:39.13:0,39,608	0/0:23,0:23:60.17:0,60,894	0/0:13,0:13:27.56:0,28,439	0/0:29,0:30:72.24:0,72,1099	0/0:20,0:20:39.12:0,39,585	0/0:23,0:22:57.19:0,57,888	0/0:21,0:21:39.13:0,39,597	0/0:6,0:6:12.04:0,12,182
chr10	55879736	.	TC	T	72.80	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.650;DP=540;FS=6.792;HRun=6;HaplotypeScore=55.0580;InbreedingCoeff=0.9085;MQ=70.08;MQ0=0;MQRankSum=-1.075;QD=14.56;ReadPosRankSum=0.547;VQSLOD=2.7153;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:72.18:0,72,898	1/1:0,5:5:15.04:161,15,0	0/0:11,0:10:24.06:0,24,287	0/0:20,0:18:40.22:0,40,418	0/0:8,0:8:21.05:0,21,260	0/0:19,0:19:45.15:0,45,592	0/0:29,0:29:84.26:0,84,1087	0/0:19,0:19:48.14:0,48,617	0/0:15,0:15:42.12:0,42,537	0/0:14,0:14:39.11:0,39,496	0/0:6,0:6:9.03:0,9,118	0/0:37,0:37:99:0,105,1372	0/0:24,0:24:66.20:0,66,854	0/0:20,0:20:54.18:0,54,707	0/0:23,0:23:66.21:0,66,868	0/0:18,0:18:54.15:0,54,680	0/0:36,0:36:99:0,99,1281	0/0:37,0:37:99:0,102,1321	0/0:13,0:13:33.09:0,33,418	0/0:10,0:10:27.09:0,27,354	0/0:45,0:45:99:0,126,1569	0/0:6,0:6:18.06:0,18,237	0/0:14,0:14:39.12:0,39,495	0/0:18,0:18:51.16:0,51,657	0/0:13,0:13:39.12:0,39,498	0/0:28,0:28:75.21:0,75,932	0/0:16,0:15:45.15:0,45,589	0/0:6,0:6:18.06:0,18,237
chr10	55886926	.	C	CACAG	19088.83	PASS	AB=0.708;AC=36;AF=0.643;AN=56;BaseQRankSum=-12.283;DP=1030;FS=1.802;HRun=0;HaplotypeScore=169.0262;InbreedingCoeff=0.5633;MQ=66.51;MQ0=8;MQRankSum=1.595;QD=25.05;ReadPosRankSum=2.412;VQSLOD=4.9698;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:64,0:65:99:0,119,1748	0/0:7,0:7:15.04:0,15,211	0/0:45,0:27:8.94:0,9,102	0/0:51,0:32:5.51:0,6,55	0/0:36,0:36:54.17:0,54,819	1/1:9,18:28:39.13:922,39,0	0/1:15,16:32:19.85:540,0,20	0/1:48,0:48:1.21:367,0,1	1/1:22,14:36:72.12:1495,72,0	1/1:33,14:47:69.23:1517,69,0	1/1:10,17:29:11.90:284,12,0	0/1:16,17:33:7.81:811,0,8	0/0:32,0:32:66.21:0,66,1008	0/0:32,0:32:57.19:0,57,883	1/1:29,17:46:75.23:1619,75,0	1/1:19,23:41:45.04:1048,45,0	0/1:18,24:43:1.69:948,0,2	1/1:12,18:31:24.06:551,24,0	1/1:20,5:24:24.08:546,24,0	1/1:25,6:31:33.10:693,33,0	1/1:36,13:49:75.23:1544,75,0	0/1:23,17:42:11.17:743,0,11	1/1:14,12:26:21.01:497,21,0	0/1:17,24:46:40.45:1076,0,40	1/1:11,16:27:51.09:1152,51,0	1/1:23,16:42:54.13:1120,54,0	1/1:29,12:41:60.21:1346,60,0	1/1:15,3:18:12.04:271,12,0
chr10	55887003	.	T	TCATA	12708.15	PASS	AB=0.780;AC=25;AF=0.446;AN=56;BaseQRankSum=-16.329;DP=929;FS=1.786;HRun=0;HaplotypeScore=175.7618;InbreedingCoeff=0.9419;MQ=71.33;MQ0=3;MQRankSum=0.141;QD=31.30;ReadPosRankSum=-1.635;VQSLOD=4.4927;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:64.63:0,65,1057	0/0:8,0:8:20.83:0,21,204	0/0:43,0:37:44.17:0,44,424	0/0:36,0:31:17.12:0,17,323	0/0:31,0:31:69.11:0,69,921	1/1:17,7:24:57.13:1160,57,0	1/1:19,7:26:51.05:871,51,0	0/0:48,0:48:84.09:0,84,811	1/1:9,26:37:45.15:1100,45,0	1/1:8,21:29:63.11:1325,63,0	1/1:12,2:14:23.97:291,24,0	0/0:36,0:36:98.98:0,99,1408	0/0:29,0:29:54.12:0,54,815	0/0:30,0:30:62.44:0,62,772	1/1:9,29:39:42.14:1002,42,0	0/0:41,0:41:90.13:0,90,1182	0/0:40,0:40:84.16:0,84,1180	0/0:34,0:34:78.05:0,78,967	1/1:10,19:30:51.87:773,52,0	1/1:5,17:24:36.05:764,36,0	1/1:16,56:77:34.98:1930,35,0	0/0:24,0:24:54.49:0,54,666	0/0:27,0:27:49.89:0,50,807	0/0:51,0:51:99:0,110,1505	1/1:3,19:24:33.11:807,33,0	0/1:23,9:32:5.22:1093,0,5	1/1:6,23:30:45.02:1041,45,0	1/1:2,18:20:24.08:552,24,0
chr10	55887022	.	TACAG	T	156.85	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-0.938;DP=983;FS=1.655;HRun=0;HaplotypeScore=214.2532;InbreedingCoeff=0.9572;MQ=59.49;MQ0=6;MQRankSum=0.787;QD=19.61;ReadPosRankSum=1.842;VQSLOD=3.6239;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,117,1982	1/1:2,6:8:15.05:245,15,0	0/0:28,0:20:13.42:0,13,86	0/0:37,0:25:30.77:0,31,262	0/0:30,0:30:69.11:0,69,1209	0/0:28,0:28:66.14:0,66,1116	0/0:35,0:35:71.08:0,71,891	0/0:63,0:63:99:0,117,1463	0/0:35,0:35:66.14:0,66,1109	0/0:37,0:37:90.24:0,90,1490	0/0:18,0:18:23.16:0,23,291	0/0:40,0:40:95.07:0,95,2015	0/0:28,0:28:72.12:0,72,1322	0/0:27,0:27:57.11:0,57,1077	0/0:44,0:44:78.13:0,78,1212	0/0:41,0:41:81.16:0,81,1520	0/0:37,0:37:78.17:0,78,1601	0/0:33,0:33:65.36:0,65,1237	0/0:34,0:33:50.42:0,50,733	0/0:31,0:31:54.10:0,54,851	0/0:82,0:82:99:0,135,2205	0/0:25,0:25:48.07:0,48,882	0/0:26,0:26:63.16:0,63,1296	0/0:53,0:53:99:0,129,2375	0/0:29,0:29:48.10:0,48,775	0/0:33,0:33:63.04:0,63,1059	0/0:30,0:30:60.13:0,60,1004	0/0:20,0:19:24.04:0,24,433
chr10	55887515	.	CTG	C	1175.55	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.470;DP=624;FS=0.000;HRun=0;HaplotypeScore=86.0459;InbreedingCoeff=0.9892;MQ=84.10;MQ0=0;MQRankSum=-2.083;QD=32.65;ReadPosRankSum=-4.073;VQSLOD=4.4461;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:39.13:0,39,703	0/0:16,0:16:48.16:0,48,870	0/0:19,0:19:29.90:0,30,684	0/0:21,0:21:38.78:0,39,777	0/0:28,0:28:81.28:0,81,1471	0/0:15,0:15:30.10:0,30,550	0/0:22,0:22:51.17:0,51,935	1/1:5,31:36:90.29:1270,90,0	0/0:23,0:23:54.19:0,54,990	0/0:36,0:36:99:0,102,1813	0/0:13,0:13:39.13:0,39,715	0/0:24,0:24:48.16:0,48,880	0/0:19,0:19:57.20:0,57,1045	0/0:12,0:12:36.12:0,36,660	0/0:28,0:28:66.23:0,66,1201	0/0:20,0:20:48.16:0,48,880	0/0:21,0:21:39.13:0,39,715	0/0:24,0:24:36.12:0,36,660	0/0:19,0:19:54.17:0,54,953	0/0:24,0:24:69.24:0,69,1265	0/0:29,0:29:69.24:0,69,1264	0/0:23,0:23:66.23:0,66,1198	0/0:17,0:17:29.71:0,30,507	0/0:22,0:22:18.06:0,18,318	0/0:13,0:13:30.10:0,30,550	0/0:33,0:33:99:0,99,1775	0/0:19,0:19:33.08:0,33,602	0/0:16,0:16:45.15:0,45,822
chr10	55893888	.	G	GC	825.24	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-6.544;DP=591;FS=18.332;HRun=4;HaplotypeScore=58.9915;InbreedingCoeff=0.8698;MQ=74.49;MQ0=0;MQRankSum=0.786;QD=31.74;ReadPosRankSum=-4.951;VQSLOD=0.7566;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,108,1225	0/0:2,0:2:6.02:0,6,68	0/0:10,0:10:12.10:0,12,192	0/0:15,0:15:24:0,24,310	0/0:15,0:15:42.10:0,42,465	0/0:14,0:14:39.11:0,39,439	0/0:33,0:33:93.26:0,93,1055	1/1:3,23:26:72.14:920,72,0	0/0:17,0:17:48.14:0,48,544	0/0:24,0:24:69.20:0,69,782	0/0:8,0:8:24.07:0,24,271	0/0:37,0:37:99:0,102,1155	0/0:28,0:28:72.20:0,72,815	0/0:26,0:26:72.20:0,72,816	0/0:23,0:23:57.16:0,57,646	0/0:19,0:19:51.15:0,51,578	0/0:34,0:34:99:0,99,1113	0/0:20,0:20:60.16:0,60,669	0/0:15,0:15:35.77:0,36,408	0/0:6,0:6:18.05:0,18,204	0/0:64,0:64:99:0,174,1943	0/0:10,0:10:27.04:0,27,293	0/0:13,0:13:36.10:0,36,407	0/0:30,0:30:84.24:0,84,952	0/0:14,0:14:36.10:0,36,407	0/0:21,0:21:63.18:0,63,714	0/0:20,0:20:57.16:0,57,646	0/0:10,0:10:30.09:0,30,340
chr10	55895861	.	CCAGT	C	75.74	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.364;DP=686;FS=0.000;HRun=0;HaplotypeScore=113.3175;InbreedingCoeff=0.9351;MQ=76.26;MQ0=1;MQRankSum=0.612;QD=8.42;ReadPosRankSum=0.671;VQSLOD=2.7686;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,117,2517	1/1:2,7:9:9.03:159,9,0	0/0:26,0:23:21.74:0,22,730	0/0:36,0:30:60.91:0,61,1146	0/0:26,0:26:75.17:0,75,1590	0/0:21,0:21:57.14:0,57,1237	0/0:32,0:32:87.19:0,87,1789	0/0:37,0:36:81.17:0,81,1435	0/0:19,0:19:57.17:0,57,1269	0/0:26,0:26:72.20:0,72,1539	0/0:20,0:20:51.15:0,51,1151	0/0:20,0:20:57.17:0,57,1320	0/0:19,0:19:57.16:0,57,1251	0/0:18,0:18:45.11:0,45,948	0/0:21,0:21:57.63:0,58,1250	0/0:23,0:23:69.21:0,69,1663	0/0:40,0:40:99:0,102,2093	0/0:23,0:23:66.20:0,66,1584	0/0:19,0:19:51.01:0,51,971	0/0:19,0:19:50.80:0,51,1050	0/0:21,0:21:60.21:0,60,1539	0/0:26,0:26:72.22:0,72,1762	0/0:12,0:12:30.07:0,30,651	0/0:29,0:29:84.27:0,84,2065	0/0:20,0:20:51.09:0,51,1123	0/0:30,0:30:87.18:0,87,1762	0/0:21,0:21:57.15:0,57,1307	0/0:28,0:28:84.14:0,84,1579
chr10	55895979	.	C	CT	1602.54	PASS	AB=0.988;AC=26;AF=0.464;AN=56;BaseQRankSum=5.444;DP=504;FS=0.874;HRun=12;HaplotypeScore=70.6201;InbreedingCoeff=0.4798;MQ=71.87;MQ0=1;MQRankSum=-1.213;QD=5.27;ReadPosRankSum=-1.805;VQSLOD=1.6198;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,1:28:5.48:0,5,316	0/0:7,0:8:13.62:0,14,90	0/0:16,0:11:13.32:0,13,86	0/0:20,0:14:11:0,11,73	0/1:15,0:17:1.67:2,0,92	0/1:13,0:13:13.49:75,0,13	0/1:25,0:26:12.18:85,0,12	1/1:13,19:33:23.37:469,23,0	1/1:17,0:17:23.64:114,24,0	1/1:18,0:18:8.16:103,8,0	1/1:15,0:15:19.79:105,20,0	0/0:13,0:13:26.79:0,27,194	0/1:14,0:15:4.62:5,0,97	0/1:22,3:26:3.58:4,0,285	1/1:12,0:12:24.83:114,25,0	0/0:13,0:15:33.83:0,34,229	0/0:32,1:35:50.28:0,50,519	0/0:20,2:22:9.56:0,10,233	1/1:21,0:21:7.99:166,8,0	1/1:17,0:17:28.37:143,28,0	0/1:17,0:17:21.12:47,0,21	0/0:6,0:6:11.92:0,12,88	0/0:15,0:15:17.76:0,18,129	0/0:20,0:21:40.68:0,41,288	1/1:13,0:13:5.50:118,6,0	0/1:18,0:18:8.73:69,0,9	1/1:24,0:24:33.95:178,34,0	0/1:1,0:1:0:0,0,0
chr10	55895991	.	T	TC	4432.42	PASS	AB=1.000;AC=27;AF=0.482;AN=56;BaseQRankSum=-5.024;DP=453;FS=0.403;HRun=3;HaplotypeScore=60.3163;InbreedingCoeff=0.8745;MQ=73.58;MQ0=1;MQRankSum=0.413;QD=20.33;ReadPosRankSum=0.907;VQSLOD=4.2575;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:45.97:0,46,621	0/0:6,0:6:11.97:0,12,124	0/0:20,0:14:1.85:0,2,120	0/0:16,0:9:14.49:0,14,116	0/0:12,0:12:21:0,21,222	1/1:2,10:13:25.61:294,26,0	1/1:3,20:24:34.61:405,35,0	0/1:29,0:29:13.38:13,0,160	1/1:0,13:13:24.08:305,24,0	1/1:1,13:14:40.82:437,41,0	1/1:2,10:12:21.06:263,21,0	0/0:13,0:13:33.03:0,33,351	0/0:12,0:12:20.92:0,21,195	0/0:24,0:24:49.78:0,50,646	1/1:0,12:12:27.09:344,27,0	0/0:16,0:16:41.92:0,42,420	0/0:40,0:40:99:0,105,1100	0/0:17,0:17:41.68:0,42,492	1/1:3,19:23:57.10:649,57,0	1/1:5,8:15:27.06:318,27,0	1/1:7,6:13:28.41:307,28,0	0/0:4,0:4:12.04:0,12,142	0/0:11,0:11:26.95:0,27,268	0/0:16,0:16:39.03:0,39,447	1/1:2,10:12:21.07:265,21,0	1/1:2,11:13:23.58:308,24,0	1/1:0,23:23:39.04:474,39,0	1/1:2,0:2:5.99:50,6,0
chr10	55896271	.	AGGAGAGGAAGAG	A	2510.61	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=3.272;DP=586;FS=19.936;HRun=0;HaplotypeScore=119.4416;InbreedingCoeff=0.5199;MQ=38.36;MQ0=129;MQRankSum=-0.210;QD=9.55;ReadPosRankSum=0.353;VQSLOD=0.7485;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:23:98.78:99,0,736	0/0:4,0:3:9.03:0,9,293	0/0:77,0:4:0.94:0,1,2	0/1:101,0:8:0.01:0,0,0	0/1:14,0:13:35.51:36,0,264	0/0:17,0:14:15.86:0,16,231	0/0:12,0:10:21.04:0,21,458	0/0:35,0:28:26.64:0,27,400	0/0:9,0:9:17:0,17,184	0/0:14,0:12:24.03:0,24,441	0/0:10,0:9:11.80:0,12,316	1/1:21,0:20:16.76:414,17,0	0/0:9,0:7:21.07:0,21,658	0/0:10,0:10:18.01:0,18,498	0/0:8,0:9:9.21:0,9,697	1/1:2,17:19:8.61:244,9,0	1/1:20,0:19:41.71:776,42,0	1/1:18,0:14:30.10:625,30,0	0/0:22,0:11:21.53:0,22,398	0/0:17,0:15:27.05:0,27,634	0/0:13,0:12:23.72:0,24,581	0/1:7,0:6:27.87:60,0,28	0/1:18,0:16:34.05:156,0,34	1/1:17,0:16:6.26:274,6,0	0/0:14,0:12:13.15:0,13,244	0/0:30,0:24:65.66:0,66,1727	0/0:11,0:9:17.88:0,18,382	0/0:10,0:6:15.05:0,15,369
chr10	55896277	.	GGA	G	1189.17	PASS	AB=0.956;AC=14;AF=0.250;AN=56;BaseQRankSum=3.017;DP=578;FS=25.049;HRun=0;HaplotypeScore=79.8561;InbreedingCoeff=-0.1515;MQ=39.83;MQ0=99;MQRankSum=2.295;QD=5.58;ReadPosRankSum=-1.183;VQSLOD=1.1211;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:25:36.06:0,36,584	0/0:5,0:4:9.03:0,9,140	0/0:72,0:3:8.76:0,9,85	0/0:94,0:8:7.90:0,8,41	0/0:13,0:13:14.48:0,14,172	0/1:19,2:17:95.20:95,0,237	0/0:14,0:13:28.63:0,29,402	0/0:34,0:30:82.36:0,82,1009	0/0:9,1:10:12.35:0,12,114	0/1:14,0:13:2.85:3,0,465	0/0:8,0:8:15.05:0,15,211	0/1:19,2:20:82.83:161,0,83	0/0:8,0:7:21.07:0,21,372	0/0:12,0:12:30.01:0,30,406	0/1:10,1:10:39.57:40,0,340	0/1:21,0:21:17.64:59,0,18	0/1:18,3:20:99:239,0,111	0/1:17,0:14:71.21:307,0,71	0/1:15,3:13:71.58:72,0,334	0/0:18,0:16:26.95:0,27,407	0/1:17,0:16:47.49:47,0,289	1/1:7,0:6:5.93:54,6,0	0/1:18,0:16:36.07:126,0,36	0/1:15,0:15:6.25:119,0,6	0/0:13,0:11:12.49:0,12,176	0/0:28,0:25:64.76:0,65,1010	0/1:12,0:10:20.29:20,0,199	0/0:10,0:6:15.01:0,15,200
chr10	55896279	.	AAGAG	A	546.13	PASS	AB=0.866;AC=12;AF=0.231;AN=52;BaseQRankSum=1.879;DP=591;FS=13.786;HRun=0;HaplotypeScore=100.4915;InbreedingCoeff=0.2857;MQ=38.91;MQ0=93;MQRankSum=-0.300;QD=3.37;ReadPosRankSum=2.726;VQSLOD=0.4091;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:17,10:26:19.48:129,0,19	0/0:4,0:4:3.01:0,3,46	./.	./.	1/1:12,1:13:2.88:47,3,0	0/0:21,0:19:12.51:0,13,134	0/0:15,0:15:12.01:0,12,205	0/0:31,0:29:7.19:0,7,135	0/0:6,1:11:8.23:0,8,37	0/0:17,0:17:27.09:0,27,421	0/1:9,0:9:0:0,0,0	0/1:16,1:19:31.23:31,0,38	0/0:8,0:7:15.05:0,15,305	0/0:17,0:17:15.03:0,15,267	0/0:12,0:11:0.15:0,0,107	1/1:21,0:21:8.90:93,9,0	0/1:16,6:21:5.06:233,0,5	1/1:15,2:14:6.02:94,6,0	0/0:20,0:16:20.86:0,21,218	0/0:14,0:15:6.02:0,6,106	0/0:19,0:18:17.62:0,18,152	0/0:5,0:7:11.17:0,11,51	0/1:14,1:16:53.26:53,0,62	0/0:12,0:16:4.30:0,4,16	0/1:13,0:15:0:0,0,0	0/0:22,0:23:32.59:0,33,414	0/0:11,0:9:5.56:0,6,17	0/0:10,0:7:12.04:0,12,169
chr10	55896507	.	C	CT	1780.87	PASS	AB=0.769;AC=40;AF=0.714;AN=56;BaseQRankSum=4.111;DP=457;FS=3.132;HRun=16;HaplotypeScore=87.6802;InbreedingCoeff=0.0620;MQ=53.70;MQ0=23;MQRankSum=-4.710;QD=4.30;ReadPosRankSum=-2.427;VQSLOD=0.9715;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:24:36.52:155,37,0	1/1:7,0:10:15.09:73,15,0	0/0:21,0:8:4.66:0,5,30	0/1:17,0:11:2.42:13,0,2	1/1:21,0:21:21.89:94,22,0	0/1:11,7:18:53.94:80,0,54	0/1:5,3:8:27.83:51,0,28	1/1:18,0:27:24.03:110,24,0	0/1:9,1:8:32.13:45,0,32	0/1:15,14:31:39.14:256,0,39	1/1:7,6:14:14.88:108,15,0	1/1:11,0:10:5.92:26,6,0	0/0:7,0:6:8.73:0,9,50	0/0:15,0:15:22.30:0,22,112	1/1:10,8:16:8.13:85,8,0	1/1:17,0:15:13.41:57,13,0	1/1:25,0:17:7.36:30,7,0	1/1:16,0:11:6.77:26,7,0	0/1:19,5:24:32.23:109,0,32	0/1:8,1:8:5.02:42,0,5	0/1:10,8:17:6.55:140,0,7	1/1:4,0:3:0.47:1,0,0	1/1:8,0:7:5.49:14,5,0	1/1:14,0:11:3.31:16,3,0	1/1:7,1:9:13.89:111,14,0	0/1:13,8:21:6.54:140,0,7	0/1:14,6:20:22.51:99,0,23	1/1:3,1:4:8.83:62,9,0
chr10	55896918	.	G	GAGACTCAAGGA	55745.59	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-8.611;DP=621;FS=12.157;HRun=0;HaplotypeScore=140.0620;InbreedingCoeff=0.9795;MQ=73.64;MQ0=0;MQRankSum=-12.323;QD=102.66;ReadPosRankSum=0.795;VQSLOD=4.2985;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,16:31:57.20:2999,57,0	1/1:2,1:5:12.01:377,12,0	0/0:22,0:22:47.19:0,47,1348	0/0:16,0:17:47.95:0,48,1349	1/1:3,11:20:36.12:1534,36,0	1/1:7,13:24:51.15:2649,51,0	1/1:5,12:28:42.14:2284,42,0	1/1:11,12:37:99:4716,105,0	1/1:2,15:23:48.16:2647,48,0	1/1:6,15:30:84.23:4018,84,0	1/1:6,8:20:30.06:1498,30,0	1/1:5,15:28:54.19:3043,54,0	0/0:17,0:17:45.15:0,45,1551	0/0:22,0:22:57.18:0,57,1899	1/1:6,11:31:48.16:2632,48,0	1/1:3,16:27:54.18:2950,54,0	1/1:6,12:25:48.16:2741,48,0	1/1:5,7:13:27.09:1544,27,0	1/1:6,5:21:57.18:2181,57,0	1/1:4,7:14:18.06:1028,18,0	1/1:3,3:14:14.98:593,15,0	1/1:3,8:12:30.10:1649,30,0	1/1:2,9:13:27.09:1477,27,0	1/1:6,6:18:33.11:1713,33,0	1/1:7,9:22:39.13:2069,39,0	1/1:9,8:23:60.18:2559,60,0	1/1:17,25:53:99:5989,111,0	1/1:1,5:6:15.05:856,15,0
chr10	55899427	.	A	AGT	1731.10	PASS	AB=0.913;AC=24;AF=0.462;AN=52;BaseQRankSum=-3.340;DP=647;FS=1.457;HRun=0;HaplotypeScore=99.1597;InbreedingCoeff=0.2938;MQ=67.29;MQ0=14;MQRankSum=1.039;QD=4.56;ReadPosRankSum=-1.055;VQSLOD=2.8151;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:34,2:36:68.76:69,0,110	0/0:3,0:7:8.52:0,9,42	./.	./.	0/0:29,0:28:30.37:0,30,298	1/1:9,8:19:15.04:205,15,0	0/1:18,0:20:13.09:13,0,66	1/1:32,0:32:10.64:67,11,0	0/1:15,0:15:62.15:95,0,62	0/1:22,0:30:8.16:197,0,8	1/1:16,5:21:6.02:89,6,0	0/0:17,0:20:11.86:0,12,112	0/0:19,0:20:11.84:0,12,103	0/0:22,0:22:12.03:0,12,131	1/1:25,0:33:12:105,12,0	0/0:12,0:26:23.42:0,23,122	0/0:29,0:30:29.74:0,30,307	0/1:24,0:24:20.67:21,0,148	0/1:24,1:25:12.45:59,0,12	0/1:8,8:17:20.41:143,0,20	0/1:36,2:36:9.24:141,0,9	0/0:8,0:8:7.57:0,8,70	0/0:13,0:13:8.85:0,9,79	0/0:37,0:37:29.88:0,30,297	1/1:16,3:19:13.58:162,14,0	1/1:12,6:18:14.94:152,15,0	1/1:7,8:16:18.05:250,18,0	1/1:11,2:13:0.95:145,1,0
chr10	55899825	.	AAAAC	A	8663.60	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=13.551;DP=745;FS=5.240;HRun=0;HaplotypeScore=128.5549;InbreedingCoeff=0.9532;MQ=57.36;MQ0=2;MQRankSum=2.300;QD=22.16;ReadPosRankSum=3.698;VQSLOD=4.4761;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:23,25:48:59.37:949,59,0	1/1:4,7:11:15.05:237,15,0	0/0:34,0:23:24.08:0,24,564	0/0:21,0:18:12.04:0,12,286	1/1:11,13:25:33.11:522,33,0	1/1:7,13:22:33.98:485,34,0	1/1:7,13:20:27.09:426,27,0	0/0:51,0:49:63.17:0,63,1131	1/1:9,13:22:33.11:522,33,0	1/1:13,19:32:57.17:853,57,0	1/1:9,12:22:24.08:380,24,0	0/0:27,0:27:45.15:0,45,1061	0/0:28,1:29:6.69:0,7,1165	0/0:16,0:16:27.09:0,27,630	1/1:7,13:20:27.09:427,27,0	0/0:31,1:32:6.69:0,7,1147	0/0:27,0:27:60.19:0,60,1350	0/0:26,0:26:39.13:0,39,915	1/1:9,0:19:9.01:84,9,0	1/1:6,15:22:38.16:576,38,0	1/1:16,20:36:52.44:852,52,0	0/0:14,0:14:18.06:0,18,429	0/0:27,1:28:12.70:0,13,1234	0/0:49,0:49:99:0,99,2359	1/1:9,12:21:23.58:379,24,0	1/1:13,18:31:54.18:850,54,0	1/1:11,17:28:39.13:598,39,0	1/1:0,11:11:33.11:522,33,0
chr10	55901165	.	A	AT	2662.45	PASS	AB=0.781;AC=29;AF=0.518;AN=56;BaseQRankSum=-7.256;DP=624;FS=10.601;HRun=14;HaplotypeScore=71.4780;InbreedingCoeff=0.4355;MQ=65.81;MQ0=0;MQRankSum=-0.306;QD=6.69;ReadPosRankSum=-3.405;VQSLOD=0.7978;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:43,1:48:6.41:6,0,341	0/1:5,5:10:4.27:91,0,4	0/0:18,0:16:23.60:0,24,136	0/0:12,0:12:4.74:0,5,55	0/0:30,1:33:4.66:0,5,249	1/1:4,7:11:12:105,12,0	0/1:17,6:24:12.37:229,0,12	1/1:14,10:27:26.83:234,27,0	0/1:4,14:18:1.27:114,0,1	1/1:8,14:23:12.84:260,13,0	1/1:5,15:20:0.15:198,0,0	0/1:26,2:30:57.23:57,0,154	0/0:19,0:19:11.38:0,11,76	0/0:19,0:19:26.31:0,26,171	1/1:2,19:21:20.09:201,20,0	0/0:9,0:24:28.07:0,28,97	0/0:24,4:28:17.79:0,18,242	0/0:17,0:19:43.35:0,43,275	1/1:8,4:12:1.63:126,2,0	1/1:7,17:24:44.52:316,45,0	1/1:5,9:15:11.83:91,12,0	0/1:19,1:22:7.01:7,0,82	0/0:24,0:24:29.26:0,29,192	0/0:28,0:28:26.70:0,27,300	1/1:9,14:25:4.46:163,4,0	1/1:13,20:34:37.96:408,38,0	0/1:9,18:28:31.68:139,0,32	1/1:0,6:6:12:105,12,0
chr10	55902913	.	TTATC	T	4707.55	PASS	AB=0.998;AC=29;AF=0.518;AN=56;BaseQRankSum=14.891;DP=605;FS=7.065;HRun=0;HaplotypeScore=106.1895;InbreedingCoeff=-0.0805;MQ=73.47;MQ0=8;MQRankSum=-2.099;QD=11.18;ReadPosRankSum=-2.370;VQSLOD=3.2659;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:11.72:0,12,220	0/1:19,0:19:35.36:35,0,92	0/0:29,0:18:28.26:0,28,313	0/0:35,0:19:36.03:0,36,353	0/1:15,0:15:25.91:26,0,34	0/1:12,0:12:81.01:86,0,81	0/1:22,0:22:38.03:38,0,254	0/0:41,0:41:99:0,102,927	0/1:25,0:25:99:159,0,142	0/1:16,0:16:99:105,0,115	0/1:7,0:7:53.06:63,0,53	1/1:3,27:30:39.13:677,39,0	0/0:28,0:28:84.02:0,84,1461	0/0:28,0:28:66.12:0,66,1346	0/1:33,0:33:99:165,0,299	1/1:3,18:21:26.96:480,27,0	1/1:1,24:25:24.08:427,24,0	1/1:1,15:16:16.30:258,16,0	0/1:17,0:17:16.65:17,0,271	0/1:14,0:14:78.63:79,0,95	0/1:30,0:30:99:266,0,199	1/1:2,10:12:21:338,21,0	1/1:1,8:9:14.89:266,15,0	1/1:0,21:21:36.05:592,36,0	0/1:20,0:20:99:103,0,152	0/1:19,0:19:99:150,0,164	0/1:26,1:27:99:294,0,149	0/1:11,0:10:71.04:83,0,71
chr10	55902922	.	TATCC	T	6818.15	PASS	AB=1.000;AC=42;AF=0.808;AN=52;BaseQRankSum=10.018;DP=605;FS=6.530;HRun=0;HaplotypeScore=100.6852;InbreedingCoeff=0.2515;MQ=66.18;MQ0=10;MQRankSum=0.974;QD=13.80;ReadPosRankSum=2.842;VQSLOD=4.0705;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:23:11.99:103,12,0	1/1:5,0:18:21.02:196,21,0	./.	./.	1/1:4,0:15:17.97:151,18,0	1/1:5,9:14:14.64:232,15,0	1/1:12,10:22:12.04:187,12,0	1/1:36,0:36:5.16:24,5,0	1/1:9,16:25:27.09:420,27,0	1/1:5,10:15:30.08:403,30,0	1/1:4,5:9:12.04:184,12,0	1/1:29,0:29:23.05:353,23,0	0/0:31,0:31:57.16:0,57,1170	0/0:28,0:28:63.18:0,63,1285	1/1:15,18:34:36.12:542,36,0	0/1:20,0:20:20.96:215,0,21	0/1:30,0:30:81.92:195,0,82	0/1:17,0:17:5.07:113,0,5	1/1:14,6:19:17.97:202,18,0	1/1:5,8:13:20.96:271,21,0	1/1:11,22:33:42.15:739,42,0	0/1:11,0:11:5.97:152,0,6	0/1:12,0:12:32.96:128,0,33	0/1:24,0:24:34.98:252,0,35	1/1:8,7:15:21.07:327,21,0	1/1:9,11:20:36.08:514,36,0	1/1:10,17:28:45.15:680,45,0	1/1:4,6:10:15.05:234,15,0
chr10	55903862	.	CT	C	7563.29	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=14.360;DP=586;FS=0.000;HRun=7;HaplotypeScore=58.2886;InbreedingCoeff=0.9965;MQ=62.86;MQ0=0;MQRankSum=-0.835;QD=26.08;ReadPosRankSum=0.087;VQSLOD=5.1932;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:87.28:0,87,1094	0/0:13,0:13:36.12:0,36,453	0/0:12,0:8:19.84:0,20,207	0/0:14,0:13:32.55:0,33,355	0/0:29,0:29:87.27:0,87,1082	1/1:1,16:17:36.08:367,36,0	1/1:0,16:16:39.09:398,39,0	0/0:29,0:29:72.20:0,72,889	1/1:1,13:14:33.07:337,33,0	1/1:5,25:30:75.16:764,75,0	1/1:2,12:14:36.08:367,36,0	0/0:10,0:10:27.09:0,27,340	0/0:21,0:21:60.19:0,60,755	0/0:15,0:15:39.12:0,39,490	1/1:1,18:19:54.12:551,54,0	0/0:19,0:19:51.16:0,51,641	0/0:30,0:30:57.05:0,57,1024	0/0:25,0:25:56.46:0,56,851	1/1:3,23:25:63.09:626,63,0	1/1:1,28:29:78.17:795,78,0	1/1:1,17:18:48.11:490,48,0	0/0:15,1:16:14.53:0,15,498	0/0:16,0:16:48.14:0,48,591	0/0:15,0:14:39.11:0,39,478	1/1:4,18:22:54.10:543,54,0	1/1:3,31:34:93.21:948,93,0	1/1:0,33:33:87.20:887,87,0	1/1:1,17:18:48.11:490,48,0
chr10	55904021	.	T	TTG	578.12	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=-4.951;DP=565;FS=1.818;HRun=0;HaplotypeScore=112.5045;InbreedingCoeff=0.8188;MQ=60.59;MQ0=7;MQRankSum=-1.257;QD=17.00;ReadPosRankSum=-3.107;VQSLOD=3.2661;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:35:99:0,102,1278	0/1:4,0:4:1.08:6,0,1	0/0:11,0:6:14.53:0,15,120	0/0:10,0:6:14.90:0,15,133	0/0:23,0:22:63.18:0,63,846	0/0:26,0:26:72.12:0,72,931	0/0:21,0:21:60.06:0,60,761	1/1:16,14:28:61.40:672,61,0	0/0:15,0:14:42.03:0,42,526	0/0:16,0:16:45.03:0,45,552	0/0:19,0:19:56.97:0,57,667	0/0:9,0:8:24.07:0,24,318	0/0:19,0:19:53.59:0,54,605	0/0:10,0:9:26.38:0,26,279	0/0:23,0:23:66.18:0,66,875	0/0:25,0:25:75.17:0,75,1003	0/0:29,0:29:84.01:0,84,1092	0/0:30,0:30:85.49:0,85,1130	0/0:23,0:21:50.71:0,51,584	0/0:11,0:11:30.10:0,30,419	0/0:26,0:26:72.10:0,72,940	0/0:10,0:10:29.99:0,30,399	0/0:18,0:18:54.05:0,54,669	0/0:22,0:22:63.06:0,63,859	0/0:12,0:12:33.10:0,33,457	0/0:32,0:32:96.22:0,96,1229	0/0:36,0:36:99:0,108,1266	0/0:19,0:19:51.06:0,51,622
chr10	55904022	.	T	TG	122.60	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.044;DP=561;FS=0.000;HRun=0;HaplotypeScore=100.2876;InbreedingCoeff=0.8871;MQ=60.65;MQ0=7;MQRankSum=-1.477;QD=4.09;ReadPosRankSum=-2.453;VQSLOD=2.7224;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:35:99:0,102,1218	0/0:4,0:4:8.37:0,8,59	0/0:12,0:6:10.86:0,11,98	0/0:10,0:6:14.90:0,15,133	0/0:23,0:22:63.15:0,63,818	0/0:26,0:26:74.81:0,75,901	0/0:21,0:21:59.87:0,60,718	1/1:17,13:28:43.43:217,43,0	0/0:15,0:14:42.04:0,42,508	0/0:15,0:15:45.02:0,45,526	0/0:19,0:19:56.98:0,57,650	0/0:9,0:8:24.05:0,24,299	0/0:19,0:19:46.76:0,47,544	0/0:10,0:9:26.38:0,26,270	0/0:23,0:23:68.97:0,69,847	0/0:25,0:25:75.17:0,75,971	0/0:28,0:28:84.06:0,84,1058	0/0:30,0:30:89.02:0,89,1114	0/0:23,0:21:53.74:0,54,585	0/0:10,0:10:29.97:0,30,388	0/0:25,0:25:72.09:0,72,907	0/0:10,0:10:30.08:0,30,394	0/0:18,0:18:49.18:0,49,626	0/0:21,0:21:63.05:0,63,826	0/0:11,0:11:33.10:0,33,441	0/0:34,0:34:96.17:0,96,1181	0/0:36,0:36:99:0,108,1198	0/0:18,0:18:50.84:0,51,586
chr10	55904025	.	T	TG	1819.37	PASS	AB=0.994;AC=35;AF=0.625;AN=56;BaseQRankSum=-3.805;DP=556;FS=7.161;HRun=0;HaplotypeScore=89.0892;InbreedingCoeff=0.0492;MQ=60.49;MQ0=7;MQRankSum=1.155;QD=3.67;ReadPosRankSum=-3.609;VQSLOD=1.4298;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:35,1:35:5.34:168,5,0	1/1:0,0:4:8.83:60,9,0	0/0:11,0:5:3.28:0,3,60	0/0:10,0:5:8.76:0,9,84	0/1:23,0:22:9.67:10,0,22	1/1:24,1:25:7.47:113,7,0	0/1:21,1:22:15.43:111,0,15	1/1:19,13:30:67.04:465,67,0	1/1:15,0:14:6.48:83,6,0	0/1:13,0:13:4.81:22,0,5	1/1:17,0:17:0.28:38,0,0	0/0:9,0:8:2.46:0,2,26	0/0:20,0:20:52.63:0,53,568	0/0:10,0:9:26.37:0,26,263	1/1:22,1:23:0.32:114,0,0	0/1:25,0:25:4.08:37,0,4	0/1:29,0:29:2.57:60,0,3	0/1:29,0:29:27.62:29,0,28	0/1:22,0:20:30.34:79,0,30	1/1:10,1:11:4.91:58,5,0	0/1:25,0:25:10.42:23,0,10	0/1:11,0:11:1.51:2,0,14	1/1:16,1:17:3.08:88,3,0	0/1:22,0:22:5.44:5,0,30	1/1:12,0:12:2.99:28,3,0	1/1:32,0:32:22.72:195,23,0	0/1:34,1:35:30.75:135,0,31	1/1:15,1:16:5.05:55,5,0
chr10	55904217	.	TATAC	T	4811.26	PASS	AB=0.639;AC=30;AF=0.577;AN=52;BaseQRankSum=7.884;DP=622;FS=1.157;HRun=0;HaplotypeScore=106.0431;InbreedingCoeff=0.6611;MQ=66.15;MQ0=8;MQRankSum=1.957;QD=14.36;ReadPosRankSum=0.861;VQSLOD=4.5281;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:18.06:0,18,411	./.	./.	0/0:27,0:14:0:0,0,0	0/0:15,0:34:46.63:0,47,634	0/1:15,18:33:18.80:428,0,19	1/1:22,7:29:3.01:46,3,0	0/0:40,0:39:0:0,0,0	1/1:8,3:11:6.02:92,6,0	1/1:6,17:22:48.09:623,48,0	1/1:13,4:17:6.02:92,6,0	0/0:17,0:17:27.09:0,27,630	0/0:17,0:17:24.07:0,24,500	0/0:23,1:24:2.03:0,2,964	1/1:9,12:21:33.11:508,33,0	0/0:20,0:20:42.13:0,42,937	0/0:38,0:38:39.24:0,39,1110	0/0:21,0:21:17.99:0,18,363	1/1:8,2:10:9.03:136,9,0	0/1:10,14:24:37.12:376,0,37	1/1:13,5:18:9.03:138,9,0	1/1:9,12:20:27.04:389,27,0	1/1:11,4:15:12.04:185,12,0	1/1:10,7:17:12.04:185,12,0	1/1:9,16:25:21.07:323,21,0	1/1:13,16:29:48.09:646,48,0	1/1:14,15:29:30.10:460,30,0	1/1:3,10:12:12.04:185,12,0
chr10	55904417	.	A	AGT	3868.49	PASS	AB=0.718;AC=13;AF=0.232;AN=56;BaseQRankSum=-10.784;DP=529;FS=4.917;HRun=0;HaplotypeScore=65.5953;InbreedingCoeff=0.6898;MQ=68.39;MQ0=6;MQRankSum=-1.314;QD=23.88;ReadPosRankSum=2.767;VQSLOD=4.0256;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:34:39.40:0,39,829	0/0:8,0:8:21.06:0,21,254	0/0:22,0:13:9.01:0,9,93	0/0:15,0:10:7.99:0,8,77	0/0:15,0:15:42.11:0,42,491	0/0:20,0:21:56.99:0,57,656	0/0:16,0:17:35.90:0,36,387	0/0:25,0:26:50.93:0,51,570	0/0:11,0:11:27.08:0,27,327	0/0:17,0:17:32.80:0,33,348	0/0:16,0:16:33.07:0,33,385	1/1:6,16:23:48.16:764,48,0	0/0:15,0:15:39:0,39,425	0/0:13,0:13:24.01:0,24,255	0/0:16,0:17:35.90:0,36,387	1/1:5,8:12:12.04:194,12,0	0/1:11,31:42:23.24:1123,0,23	1/1:8,20:28:56.93:884,57,0	0/1:19,1:21:3.28:3,0,444	0/0:13,0:13:24.07:0,24,291	0/0:36,0:39:92.75:0,93,1034	1/1:1,6:7:12.04:194,12,0	0/1:4,4:8:54.73:176,0,55	1/1:4,15:17:33.11:533,33,0	0/0:21,0:22:63.02:0,63,741	0/0:19,0:20:47.98:0,48,559	0/0:14,0:15:41.86:0,42,443	0/0:11,0:11:21.06:0,21,255
chr10	55904946	.	CA	C	1249.51	PASS	AB=0.802;AC=17;AF=0.315;AN=54;BaseQRankSum=-1.998;DP=546;FS=8.881;HRun=17;HaplotypeScore=97.8828;InbreedingCoeff=0.2378;MQ=46.94;MQ0=31;MQRankSum=-5.346;QD=4.84;ReadPosRankSum=-2.447;VQSLOD=0.5786;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:25:24.21:0,24,101	0/0:8,0:8:13.31:0,13,54	./.	0/0:14,0:1:0:0,0,0	0/0:29,0:27:42.90:0,43,188	0/1:10,3:14:11.97:40,0,12	0/1:9,5:14:37.39:72,0,37	0/0:21,0:22:35.45:0,35,214	0/1:18,5:23:43.39:115,0,43	1/1:17,15:28:46.48:265,46,0	0/1:17,3:20:17.85:121,0,18	0/0:15,0:15:21.74:0,22,92	0/0:11,0:9:3.39:0,3,81	0/0:16,0:17:19.65:0,20,173	0/1:10,1:14:0.59:67,0,1	0/0:20,0:18:26.87:0,27,111	0/0:39,0:39:57.14:0,57,260	0/0:25,0:24:48.53:0,49,212	0/1:10,2:15:25.43:66,0,25	1/1:12,12:26:14.73:195,15,0	1/1:8,2:10:7.82:40,8,0	0/0:21,0:21:40.30:0,40,173	0/0:14,0:13:24.27:0,24,107	0/0:18,0:16:23.67:0,24,104	1/1:22,5:32:44.04:208,44,0	0/1:19,4:26:19.19:96,0,19	0/1:14,3:18:23.33:87,0,23	0/1:10,1:7:30.24:48,0,30
chr10	55904958	.	A	AC	3446.38	PASS	AB=0.793;AC=20;AF=0.357;AN=56;BaseQRankSum=-9.390;DP=571;FS=5.652;HRun=0;HaplotypeScore=100.4556;InbreedingCoeff=0.8375;MQ=48.91;MQ0=27;MQRankSum=5.281;QD=14.12;ReadPosRankSum=5.929;VQSLOD=5.0894;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:7,15:21:13.72:262,0,14	1/1:0,8:9:20.78:205,21,0	0/0:8,0:3:2.52:0,3,49	0/1:13,0:3:0.84:1,0,11	1/1:7,27:32:41.69:476,42,0	0/0:13,0:13:31.75:0,32,265	0/0:19,0:19:44.93:0,45,398	0/0:27,0:25:58.23:0,58,476	0/0:24,0:23:65.13:0,65,593	0/0:35,0:31:67.26:0,67,381	0/0:21,0:20:52.90:0,53,436	1/1:1,14:16:20.82:233,21,0	0/0:9,0:7:17.98:0,18,183	0/0:17,0:16:36.68:0,37,405	0/0:16,0:15:38.87:0,39,323	1/1:5,15:19:26.35:262,26,0	1/1:4,31:39:6.61:533,7,0	1/1:3,21:26:34.45:520,34,0	0/0:13,0:13:34.07:0,34,271	0/0:30,0:30:72.93:0,73,576	0/0:11,0:11:21.88:0,22,191	1/1:2,18:20:45.75:465,46,0	1/1:3,15:17:23.38:239,23,0	1/1:6,17:21:26.92:250,27,0	0/0:33,0:33:92.51:0,93,722	0/0:25,0:24:62.60:0,63,538	0/0:17,0:17:43.17:0,43,365	0/0:9,0:7:20.97:0,21,200
chr10	55904976	.	CA	C	3540.64	PASS	AB=0.715;AC=26;AF=0.464;AN=56;BaseQRankSum=-0.966;DP=578;FS=8.389;HRun=10;HaplotypeScore=98.6217;InbreedingCoeff=0.7450;MQ=60.56;MQ0=13;MQRankSum=-2.714;QD=11.65;ReadPosRankSum=3.501;VQSLOD=2.8071;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,1:22:42.02:0,42,429	0/0:9,0:9:24.03:0,24,253	0/0:17,0:14:26.74:0,27,313	0/0:14,0:7:17.72:0,18,148	0/0:34,1:34:45.17:0,45,689	0/1:4,11:15:6.11:181,0,6	1/1:4,15:19:35.98:313,36,0	1/1:9,16:24:18.92:271,19,0	1/1:10,10:20:29.95:260,30,0	1/1:7,19:25:54.46:469,54,0	0/1:13,11:23:6.16:181,0,6	0/0:20,0:20:30.92:0,31,320	0/0:11,0:9:18.03:0,18,189	0/0:24,0:23:48.01:0,48,491	1/1:7,10:17:20.89:182,21,0	0/0:18,1:18:4.02:0,4,264	0/0:38,0:38:66.02:0,66,686	0/0:23,0:22:45.07:0,45,484	1/1:7,9:14:20.97:182,21,0	1/1:12,20:32:47.68:408,48,0	1/1:2,10:12:17.79:143,18,0	0/0:18,0:18:36.04:0,36,369	0/0:21,0:22:39.71:0,40,394	0/1:17,2:18:25.19:25,0,186	1/1:12,19:31:41.48:362,41,0	0/1:12,10:21:0.97:227,0,1	1/1:8,9:17:23.22:207,23,0	1/1:2,5:7:14.98:130,15,0
chr10	55905063	.	C	CA	505.65	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-5.693;DP=583;FS=1.752;HRun=9;HaplotypeScore=60.2784;InbreedingCoeff=0.9020;MQ=69.17;MQ0=0;MQRankSum=-1.667;QD=18.73;ReadPosRankSum=-4.554;VQSLOD=2.4204;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,120,1042	0/0:11,0:11:29.99:0,30,260	0/0:5,0:5:8.98:0,9,75	0/0:10,0:11:14.47:0,14,109	0/0:31,1:32:41.78:0,42,592	0/0:25,1:26:26.79:0,27,462	0/0:18,0:18:44.96:0,45,387	1/1:9,18:27:57.09:600,57,0	0/0:14,0:14:41.99:0,42,365	0/0:25,0:25:59.97:0,60,521	0/0:15,0:15:32.97:0,33,286	0/0:25,0:25:56.98:0,57,495	0/0:13,0:13:35.99:0,36,313	0/0:17,0:17:35.94:0,36,301	0/0:19,0:19:44.98:0,45,391	0/0:22,0:21:53.99:0,54,468	0/0:44,0:44:99:0,108,937	0/0:24,0:24:62.98:0,63,547	0/0:18,0:18:35.97:0,36,312	0/0:17,1:18:14.80:0,15,357	0/0:22,0:22:41.97:0,42,365	0/0:22,0:22:53.93:0,54,462	0/0:23,1:24:17.06:0,17,382	0/0:11,0:11:29.99:0,30,260	0/0:18,0:18:35.99:0,36,313	0/0:23,0:23:65.97:0,66,568	0/0:23,0:23:59.99:0,60,521	0/0:9,0:9:23.99:0,24,208
chr10	55906576	.	T	TG	2091.88	PASS	AB=1.000;AC=18;AF=0.321;AN=56;BaseQRankSum=-0.087;DP=592;FS=0.000;HRun=2;HaplotypeScore=113.4587;InbreedingCoeff=0.8131;MQ=66.60;MQ0=27;MQRankSum=0.121;QD=10.41;ReadPosRankSum=-0.015;VQSLOD=1.4223;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:19:44.77:0,45,357	0/0:10,0:9:25.42:0,25,144	0/0:66,0:26:17.33:0,17,313	0/0:70,0:23:17.14:0,17,169	0/0:24,0:24:57.08:0,57,477	0/0:13,0:12:35.84:0,36,291	0/0:14,0:14:35.58:0,36,258	0/0:18,0:19:31.46:0,31,246	1/1:6,0:5:11.59:87,12,0	1/1:35,1:35:24.44:503,24,0	1/1:9,20:27:34.49:288,34,0	0/0:10,0:11:26.39:0,26,188	0/0:16,0:16:44.66:0,45,335	0/0:9,0:9:13.65:0,14,119	0/0:15,0:14:35.55:0,36,273	0/0:14,0:14:38.22:0,38,299	0/0:23,0:22:53.20:0,53,388	0/0:16,0:16:46.57:0,47,350	1/1:15,0:15:10:266,10,0	1/1:27,0:27:26.76:450,27,0	0/1:6,0:5:8.39:37,0,8	0/0:12,0:12:35.91:0,36,299	0/0:18,0:19:48.03:0,48,367	0/0:15,0:15:9.54:0,10,189	1/1:22,1:24:3.95:82,4,0	1/1:25,0:22:43.72:450,44,0	1/1:21,0:19:11.65:48,12,0	0/1:11,0:11:4.02:80,0,4
chr10	55906609	.	TGC	T	133.70	PASS	AB=0.914;AC=8;AF=0.143;AN=56;BaseQRankSum=8.251;DP=511;FS=25.139;HRun=0;HaplotypeScore=94.1530;InbreedingCoeff=-0.1759;MQ=58.22;MQ0=15;MQRankSum=-5.298;QD=1.23;ReadPosRankSum=-0.254;VQSLOD=0.0195;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,1:17:36.98:0,37,689	0/1:4,4:9:99:160,0,187	0/0:54,0:20:49.53:0,50,700	0/0:74,0:23:27.95:0,28,430	0/0:15,2:17:13.36:0,13,778	0/0:12,0:12:31.32:0,31,581	0/1:16,0:16:3.11:3,0,542	0/0:22,0:22:37.28:0,37,1119	0/0:8,0:8:15.88:0,16,397	0/1:14,0:14:15.42:15,0,552	0/1:14,2:14:13.25:13,0,374	0/1:8,2:9:11.49:11,0,261	0/1:13,0:13:24.86:25,0,535	0/0:10,1:11:26.74:0,27,436	0/0:19,0:19:50.50:0,50,856	0/0:11,1:12:6.03:0,6,499	0/1:16,0:17:10.92:11,0,560	0/1:14,0:14:21.51:22,0,316	0/0:12,0:12:25.07:0,25,511	0/0:13,0:13:12.14:0,12,445	0/0:8,0:8:24.08:0,24,454	0/0:11,0:11:20.74:0,21,415	0/0:23,0:23:54.74:0,55,980	0/0:14,1:14:2.35:0,2,574	0/0:20,1:21:16.04:0,16,755	0/0:12,0:11:30.10:0,30,561	0/0:22,1:21:23.67:0,24,639	0/0:17,1:16:6.47:0,6,398
chr10	55908661	.	ATGG	A	506.04	PASS	AC=22;AF=0.500;AN=44;BaseQRankSum=1.328;DP=302;FS=2.597;HRun=0;HaplotypeScore=46.3191;InbreedingCoeff=0.5460;MQ=71.60;MQ0=6;MQRankSum=-3.576;QD=3.75;ReadPosRankSum=1.328;VQSLOD=1.2057;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:14,8:22:9.03:117,9,0	1/1:2,0:3:2.98:21,3,0	./.	./.	1/1:10,1:11:3.01:39,3,0	./.	1/1:9,0:8:5.92:41,6,0	./.	0/0:6,0:9:6.02:0,6,78	./.	0/0:3,0:3:3.01:0,3,39	1/1:7,4:12:6.02:72,6,0	0/0:12,0:12:12.03:0,12,197	0/0:11,0:10:15.05:0,15,284	0/0:5,0:7:6.02:0,6,78	1/1:6,0:6:3.01:39,3,0	1/1:12,0:18:14.88:105,15,0	1/1:8,0:13:5.95:42,6,0	0/0:11,0:11:3:0,3,25	0/0:5,0:5:3.01:0,3,55	0/0:14,0:16:6.02:0,6,78	1/1:9,0:9:3:25,3,0	1/1:13,1:14:3.01:39,3,0	1/1:14,3:17:9.03:117,9,0	0/0:11,0:12:3.01:0,3,39	0/0:8,0:8:9.02:0,9,102	0/0:6,0:6:3.01:0,3,40	./.
chr10	55910270	.	A	AGTGTGT	12722.91	PASS	AB=0.983;AC=28;AF=0.500;AN=56;BaseQRankSum=0.032;DP=880;FS=1.537;HRun=0;HaplotypeScore=188.4268;InbreedingCoeff=0.8183;MQ=63.08;MQ0=8;MQRankSum=-12.548;QD=30.58;ReadPosRankSum=-4.712;VQSLOD=3.6051;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:41:61.31:0,61,1549	1/1:11,0:9:8.93:69,9,0	0/0:44,0:19:8.98:0,9,91	0/0:48,0:19:13.89:0,14,223	0/0:30,0:32:81.27:0,81,1588	0/0:27,0:27:57.16:0,57,1061	0/0:38,0:41:84.27:0,84,1629	1/1:38,0:37:54.08:799,54,0	1/1:15,11:30:36.11:826,36,0	1/1:17,17:42:73.46:1717,73,0	1/1:9,9:17:15.05:412,15,0	0/0:30,0:33:75.25:0,75,1531	0/0:36,0:38:97.20:0,97,1930	0/0:33,0:34:75.24:0,75,1487	1/1:11,27:41:72.23:2167,72,0	0/1:27,1:29:35.36:35,0,1141	0/0:27,0:27:51.14:0,51,1028	0/1:15,0:15:99:114,0,345	1/1:16,5:22:30.24:730,30,0	1/1:6,19:35:53.41:1410,53,0	1/1:17,14:34:17.97:397,18,0	0/0:31,0:34:57.17:0,57,1085	0/0:29,0:33:57.19:0,57,1117	0/0:31,0:30:7.79:0,8,1226	1/1:6,8:17:15.05:390,15,0	1/1:15,16:34:69.23:1538,69,0	1/1:13,20:34:60.21:1824,60,0	1/1:6,5:12:12.04:294,12,0
chr10	55910294	.	T	TG	1344.01	PASS	AB=0.922;AC=13;AF=0.232;AN=56;BaseQRankSum=15.965;DP=881;FS=1.127;HRun=1;HaplotypeScore=138.1999;InbreedingCoeff=-0.2997;MQ=53.71;MQ0=18;MQRankSum=-13.175;QD=4.38;ReadPosRankSum=0.622;VQSLOD=0.3419;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:41:99:0,107,1410	0/1:6,4:8:52.69:53,0,77	0/0:67,0:20:45.10:0,45,565	0/0:76,0:25:56.69:0,57,711	0/0:40,0:40:99:0,114,1498	0/0:26,0:26:72.16:0,72,938	0/0:36,0:37:99:0,108,1428	0/1:20,13:31:99:351,0,536	0/1:19,2:21:45.30:45,0,196	0/1:30,1:30:99:103,0,220	0/1:21,1:21:19.78:20,0,412	0/0:35,0:35:99:0,99,1325	0/0:44,0:45:99:0,118,1654	0/0:33,0:33:96.25:0,96,1264	0/1:36,0:37:99:184,0,168	0/0:30,0:30:80.32:0,80,1130	0/0:24,0:24:72.21:0,72,973	0/1:10,1:12:54.95:55,0,280	0/1:24,0:22:7.77:8,0,425	0/1:28,0:28:99:239,0,121	0/1:34,1:35:99:163,0,442	0/0:28,0:28:78.18:0,78,1033	0/0:26,0:26:72.17:0,72,952	0/0:36,0:36:86.83:0,87,1184	0/1:16,0:16:33.69:34,0,190	0/0:26,1:26:11.50:0,11,474	0/1:24,2:27:99:201,0,194	0/1:9,0:9:42.28:42,0,103
chr10	55912187	.	AT	A	1706.19	PASS	AB=0.924;AC=21;AF=0.375;AN=56;BaseQRankSum=5.907;DP=513;FS=3.189;HRun=14;HaplotypeScore=58.7847;InbreedingCoeff=0.7991;MQ=69.29;MQ0=6;MQRankSum=1.421;QD=8.20;ReadPosRankSum=2.303;VQSLOD=2.8201;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:34:83.48:0,83,734	0/0:2,0:8:17.15:0,17,89	0/0:32,0:16:20.75:0,21,156	0/1:18,0:11:5.65:6,0,10	0/0:21,2:24:9.72:0,10,358	1/1:4,11:15:13.33:186,13,0	1/1:3,11:14:29.75:206,30,0	0/0:7,0:14:22.69:0,23,107	0/1:5,1:7:2.73:3,0,108	0/0:24,0:24:40.14:0,40,501	0/0:13,0:13:23.51:0,24,201	1/1:6,8:14:14.80:103,15,0	0/0:13,0:13:24.03:0,24,223	0/0:9,0:9:20.90:0,21,175	0/0:13,0:13:27.03:0,27,250	1/1:4,12:16:32.69:226,33,0	1/1:8,26:35:55.92:445,56,0	1/1:5,12:18:25.81:170,26,0	0/0:15,1:16:12.44:0,12,252	0/1:22,3:26:10.84:11,0,319	0/0:6,0:6:18.02:0,18,167	1/1:3,9:12:23.75:164,24,0	1/1:3,10:13:20.80:144,21,0	1/1:3,16:20:37.68:252,38,0	0/0:17,0:19:44.86:0,45,394	0/0:26,0:26:48:0,48,429	0/0:27,1:32:48.28:0,48,563	0/0:21,0:21:59.76:0,60,512
chr10	55912338	.	TTCTC	T	1264.95	PASS	AB=0.869;AC=25;AF=0.521;AN=48;BaseQRankSum=0.312;DP=524;FS=12.972;HRun=0;HaplotypeScore=89.4239;InbreedingCoeff=0.2462;MQ=57.65;MQ0=7;MQRankSum=-0.021;QD=4.52;ReadPosRankSum=-0.362;VQSLOD=0.9115;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:27.08:0,27,474	1/1:1,0:5:6.01:56,6,0	./.	./.	0/0:15,0:17:6.02:0,6,123	1/1:19,0:18:2.99:28,3,0	0/1:19,0:22:12.89:63,0,13	0/0:25,0:25:0.47:0,0,1	0/0:13,0:15:23.06:0,23,303	./.	1/1:12,0:12:2.50:45,3,0	0/0:18,0:18:5.81:0,6,57	0/0:13,0:14:18.05:0,18,304	0/0:8,0:12:11.44:0,11,119	1/1:10,2:13:12.04:174,12,0	0/1:14,4:18:29.33:29,0,89	0/1:18,0:16:12.73:70,0,13	1/1:22,5:27:11.48:184,11,0	./.	0/1:8,3:12:0:0,0,0	1/1:17,1:18:3.01:46,3,0	0/0:20,0:21:5.74:0,6,37	0/1:22,0:22:35.33:49,0,35	0/1:14,5:20:45.45:75,0,45	0/1:22,3:25:72.16:124,0,72	1/1:16,4:21:15.04:200,15,0	1/1:12,6:18:15.04:231,15,0	1/1:8,0:5:3.01:46,3,0
chr10	55913086	.	G	GT	7967.09	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-15.273;DP=750;FS=10.709;HRun=8;HaplotypeScore=70.9528;InbreedingCoeff=0.9986;MQ=68.70;MQ0=1;MQRankSum=-0.796;QD=27.95;ReadPosRankSum=1.462;VQSLOD=4.8394;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,121,1266	0/0:10,0:10:24.01:0,24,219	0/0:23,0:23:47.97:0,48,427	0/0:29,0:26:52.96:0,53,533	0/0:26,0:26:72.03:0,72,658	0/0:21,0:21:60.02:0,60,543	0/0:28,0:28:75.03:0,75,686	0/0:30,0:29:62.99:0,63,569	1/1:5,21:26:54.16:622,54,0	1/1:5,28:33:81.24:934,81,0	1/1:3,16:19:45.05:490,45,0	0/0:23,0:23:51.01:0,51,467	0/0:25,0:26:68.06:0,68,610	0/0:28,0:28:76.84:0,77,688	1/1:2,29:31:84.25:969,84,0	0/0:27,0:27:63.01:0,63,576	0/0:41,0:41:99:0,99,906	0/0:23,0:23:69.04:0,69,631	1/1:1,13:14:35.94:395,36,0	1/1:2,29:31:78.12:857,78,0	1/1:5,31:36:90.27:1039,90,0	0/0:18,1:20:18.44:0,18,410	0/0:16,0:16:42.01:0,42,379	0/0:40,1:41:79.44:0,79,981	1/1:4,23:27:57.17:656,57,0	1/1:2,23:26:72.21:822,72,0	1/1:2,26:28:44.60:767,45,0	1/1:1,12:13:36.11:415,36,0
chr10	55915959	.	CCTTCCTTTCTTTCTTT	C	9685.18	PASS	AB=0.922;AC=30;AF=0.536;AN=56;BaseQRankSum=10.244;DP=602;FS=5.100;HRun=0;HaplotypeScore=279.5428;InbreedingCoeff=0.0701;MQ=55.09;MQ0=3;MQRankSum=-1.983;QD=20.43;ReadPosRankSum=4.604;VQSLOD=2.5472;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:2,33:35:12.04:478,12,0	0/1:13,0:13:91.76:92,0,118	0/0:15,0:11:6.86:0,7,104	0/0:14,0:12:22.07:0,22,312	1/1:1,35:36:65.36:876,65,0	1/1:10,3:13:36.07:812,36,0	1/1:15,0:14:3.49:338,3,0	0/0:39,0:34:86.72:0,87,715	0/0:12,0:12:32.73:0,33,244	0/1:26,0:26:99:378,0,437	0/1:13,0:13:99:289,0,135	0/1:2,13:15:31.54:463,0,32	0/0:17,0:17:50.72:0,51,3031	0/0:21,0:21:60.09:0,60,2121	0/1:22,0:22:99:490,0,286	1/1:0,30:29:15.05:700,15,0	1/1:17,0:17:33.77:396,34,0	0/1:2,21:23:25.19:268,0,25	0/1:22,0:21:46.50:46,0,303	0/1:20,0:20:99:406,0,218	0/0:10,0:9:18.62:0,19,158	1/1:4,22:26:44.60:687,45,0	1/1:2,25:27:11.47:348,11,0	1/1:0,16:16:3.01:112,3,0	0/1:25,0:25:99:554,0,317	0/1:36,0:35:99:821,0,454	0/1:28,0:28:99:728,0,332	0/1:16,0:16:99:404,0,213
chr10	55915983	.	TC	T	1516.97	PASS	AB=0.817;AC=13;AF=0.241;AN=54;BaseQRankSum=3.391;DP=545;FS=0.433;HRun=1;HaplotypeScore=189.6895;InbreedingCoeff=0.0319;MQ=49.39;MQ0=7;MQRankSum=-6.266;QD=7.36;ReadPosRankSum=1.483;VQSLOD=0.6513;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:20.68:0,21,233	0/0:13,0:13:17.53:0,18,155	./.	0/0:2,0:2:5.95:0,6,58	0/0:36,0:36:68.18:0,68,845	0/0:13,0:13:35.27:0,35,397	0/0:14,0:13:39.13:0,39,559	0/0:22,0:18:48.04:0,48,591	0/1:13,0:13:16.13:16,0,197	0/1:17,5:22:99:129,0,278	0/1:14,4:18:96.51:147,0,97	0/0:16,0:16:14.47:0,14,145	0/0:22,0:22:66.21:0,66,967	0/0:20,0:20:60.19:0,60,874	0/1:11,7:18:99:154,0,108	0/0:30,0:29:12.32:0,12,68	0/0:20,0:20:60.13:0,60,845	0/0:23,0:22:10.28:0,10,102	0/1:15,1:12:54.15:88,0,54	0/1:14,6:20:85.47:229,0,85	1/1:6,0:5:6.48:41,6,0	0/0:25,0:25:34.68:0,35,439	0/0:24,0:24:18.30:0,18,142	0/0:18,0:18:9.03:0,9,109	0/1:20,7:27:99:272,0,250	0/1:17,11:27:99:265,0,157	0/1:22,9:31:99:202,0,300	1/1:2,5:7:17.57:132,18,0
chr10	55915986	.	TTCTTTCTTTCTTTCTTTCTTTCTTTC	T	15681.57	PASS	AB=1.000;AC=24;AF=0.444;AN=54;BaseQRankSum=0.102;DP=541;FS=5.369;HRun=0;HaplotypeScore=349.1408;InbreedingCoeff=0.8239;MQ=48.01;MQ0=8;MQRankSum=-9.272;QD=65.89;ReadPosRankSum=-3.903;VQSLOD=2.5707;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:23.37:0,23,681	0/1:15,0:15:37.69:38,0,230	./.	0/0:5,0:4:11.73:0,12,182	0/0:35,0:35:62.53:0,63,1348	0/0:13,0:13:29.17:0,29,666	0/0:16,0:15:44.86:0,45,1127	0/1:20,0:17:99:270,0,334	1/1:14,0:14:33.24:501,33,0	1/1:19,4:23:60.39:1782,60,0	1/1:13,4:17:47.92:1230,48,0	0/0:16,0:16:20.94:0,21,432	0/0:22,0:22:66.16:0,66,5766	0/0:20,0:20:57.19:0,57,4602	1/1:13,6:19:46.31:1550,46,0	0/0:29,0:28:17.23:0,17,142	0/0:20,0:20:57.18:0,57,1633	0/0:23,0:22:14.81:0,15,396	1/1:13,1:10:23.29:469,23,0	1/1:13,6:19:51.91:1368,52,0	1/1:6,0:5:8.48:79,8,0	0/0:24,0:24:37.15:0,37,837	0/0:24,0:24:24.19:0,24,346	0/0:18,0:18:10.59:0,11,184	1/1:20,7:27:79.26:2231,79,0	1/1:17,9:25:66.32:2440,66,0	1/1:22,9:31:87.30:2715,87,0	1/1:3,4:7:20.99:1008,21,0
chr10	55915999	.	TCTTTCTTTCTTTC	T	11055.56	PASS	AB=0.995;AC=40;AF=0.714;AN=56;BaseQRankSum=12.854;DP=487;FS=2.561;HRun=0;HaplotypeScore=234.7726;InbreedingCoeff=0.2758;MQ=51.41;MQ0=6;MQRankSum=-7.056;QD=25.30;ReadPosRankSum=3.202;VQSLOD=3.4126;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:33:99:356,0,157	1/1:0,17:17:25.64:572,26,0	0/0:6,0:6:13.78:0,14,183	0/0:6,0:5:12.04:0,12,148	1/1:34,0:34:37.43:456,37,0	1/1:10,1:11:11.52:523,12,0	0/1:12,0:11:27.96:51,0,28	1/1:18,0:17:45.15:626,45,0	1/1:8,0:8:22.25:124,22,0	1/1:18,0:18:52.09:724,52,0	1/1:13,0:13:30.39:485,30,0	0/1:15,0:15:36.39:257,0,36	0/0:21,0:21:63.21:0,63,3061	0/0:17,0:17:51.16:0,51,2224	1/1:15,0:15:44.42:800,44,0	1/1:28,0:27:11.29:475,11,0	0/1:21,0:21:55.33:126,0,55	0/1:24,0:23:55.74:193,0,56	1/1:10,0:7:20.53:223,21,0	1/1:13,0:13:34.79:640,35,0	1/1:4,0:4:10.13:64,10,0	0/1:23,0:24:12.77:335,0,13	0/1:25,0:25:20.76:190,0,21	0/1:22,0:22:40.20:40,0,49	1/1:24,0:24:68.70:976,69,0	1/1:16,0:16:45.91:1129,46,0	1/1:27,0:27:73.47:1165,73,0	1/1:5,0:5:15.05:524,15,0
chr10	55916007	.	TC	T	2194.18	PASS	AB=0.952;AC=25;AF=0.446;AN=56;BaseQRankSum=11.743;DP=516;FS=7.105;HRun=1;HaplotypeScore=183.4369;InbreedingCoeff=0.8029;MQ=51.01;MQ0=5;MQRankSum=-8.792;QD=9.42;ReadPosRankSum=2.691;VQSLOD=1.3955;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:21.54:0,22,181	1/1:17,0:17:14.77:40,15,0	0/0:10,0:10:29.66:0,30,356	0/0:8,0:6:15.03:0,15,191	0/0:31,0:31:34.18:0,34,279	0/1:12,0:12:3.60:4,0,119	0/0:12,0:11:29.54:0,30,230	0/0:21,0:19:29.01:0,29,99	1/1:10,0:10:29.29:183,29,0	1/1:22,0:22:61.62:357,62,0	1/1:15,1:16:3:127,3,0	0/0:16,0:16:22.02:0,22,129	0/0:24,0:24:72.21:0,72,1028	0/0:15,0:15:45.15:0,45,659	1/1:17,0:17:43.76:249,44,0	0/1:27,0:26:6.20:6,0,58	0/0:23,0:23:58.86:0,59,560	0/0:20,0:20:19.08:0,19,128	1/1:9,0:7:20.22:126,20,0	1/1:14,0:14:35.38:193,35,0	0/1:5,1:6:4.15:50,0,4	0/0:23,1:24:15.28:0,15,188	0/0:25,0:25:18.04:0,18,119	0/0:22,0:22:29.74:0,30,219	1/1:26,0:26:68.81:370,69,0	1/1:16,1:17:44.81:214,45,0	1/1:31,1:32:73.66:389,74,0	1/1:8,0:8:20.11:102,20,0
chr10	55916008	.	C	CT	3865.81	PASS	AB=0.864;AC=24;AF=0.429;AN=56;BaseQRankSum=1.838;DP=533;FS=2.402;HRun=3;HaplotypeScore=182.9845;InbreedingCoeff=0.7065;MQ=51.03;MQ0=5;MQRankSum=-4.604;QD=15.22;ReadPosRankSum=0.023;VQSLOD=2.9900;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:28.39:0,28,204	0/0:17,0:17:12.70:0,13,37	0/0:10,0:10:29.82:0,30,308	0/0:8,0:6:15.03:0,15,167	0/0:30,0:30:41:0,41,250	0/1:13,1:14:2.70:3,0,122	0/0:13,0:12:28.62:0,29,152	0/0:22,0:20:2.35:0,2,34	1/1:1,10:11:30.09:356,30,0	1/1:8,16:24:46.13:626,46,0	1/1:8,9:17:11.03:284,11,0	0/0:15,0:15:28.59:0,29,158	0/0:25,0:25:69.21:0,69,826	0/0:15,0:15:45.14:0,45,536	1/1:6,11:17:34.40:373,34,0	0/1:26,1:26:6.44:6,0,119	0/0:24,0:24:61.33:0,61,399	0/0:20,0:20:25.41:0,25,143	1/1:6,7:11:19.78:220,20,0	1/1:6,8:14:25.15:308,25,0	0/1:2,4:6:2.97:95,0,3	0/1:22,1:23:2.31:2,0,165	0/0:26,0:26:22.93:0,23,132	0/0:22,0:22:29.16:0,29,176	1/1:7,21:28:52.25:635,52,0	1/1:12,6:18:5.45:202,5,0	1/1:12,21:33:61.94:661,62,0	1/1:6,3:9:0.84:94,1,0
chr10	55916011	.	TC	T	4685.45	PASS	AB=0.980;AC=37;AF=0.661;AN=56;BaseQRankSum=11.524;DP=542;FS=0.385;HRun=1;HaplotypeScore=178.6071;InbreedingCoeff=0.3998;MQ=50.98;MQ0=5;MQRankSum=-7.242;QD=10.72;ReadPosRankSum=2.010;VQSLOD=3.0450;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:31,1:32:54.69:64,0,55	1/1:17,0:17:22.57:253,23,0	0/0:10,0:10:29.68:0,30,341	0/0:8,0:6:15.05:0,15,186	1/1:28,0:28:22.98:94,23,0	0/1:14,1:15:8.78:91,0,9	0/1:14,0:13:25.46:25,0,39	1/1:1,21:20:54.14:725,54,0	1/1:12,0:12:33.85:217,34,0	1/1:24,0:24:69.75:461,70,0	1/1:17,1:18:33.39:231,33,0	0/1:15,0:15:2.50:2,0,30	0/0:25,0:25:75.21:0,75,976	0/0:16,0:16:48.13:0,48,614	1/1:18,0:18:50.37:355,50,0	1/1:26,0:25:0.37:41,0,0	0/0:24,0:24:42.62:0,43,193	0/1:19,1:20:27.42:33,0,27	1/1:14,0:12:22.72:153,23,0	1/1:15,0:15:41.38:284,41,0	1/1:5,1:6:6.04:57,6,0	0/1:23,0:23:40.37:46,0,40	0/1:27,0:27:16.96:61,0,17	0/0:22,0:22:1.76:0,2,65	1/1:28,0:28:71.18:447,71,0	1/1:18,1:19:51.22:348,51,0	1/1:34,1:35:84.56:523,85,0	1/1:9,0:9:25.07:174,25,0
chr10	55917367	.	GCTGACTGCTCCATCA	G	622.56	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=4.467;DP=620;FS=3.156;HRun=0;HaplotypeScore=250.3118;InbreedingCoeff=0.8730;MQ=85.24;MQ0=0;MQRankSum=-0.784;QD=27.07;ReadPosRankSum=-1.773;VQSLOD=2.6627;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,102,6035	1/1:2,4:6:5.76:221,6,0	0/0:21,0:21:16.31:0,16,327	0/0:21,0:21:22.50:0,23,785	0/0:11,0:11:30.04:0,30,1258	0/0:11,0:11:33.10:0,33,2030	0/0:35,0:35:93.24:0,93,5073	1/1:9,8:17:41.84:512,42,0	0/0:22,0:22:63.19:0,63,3757	0/0:30,0:30:66.20:0,66,3566	0/0:4,0:4:8.37:0,8,355	0/0:34,0:34:87.24:0,87,4830	0/0:21,0:21:57.14:0,57,2728	0/0:23,0:23:57.18:0,57,3384	0/0:19,0:19:54.16:0,54,3490	0/0:8,0:8:18.06:0,18,1272	0/0:35,0:35:99:0,102,5876	0/0:29,0:28:72.23:0,72,4492	0/0:26,0:26:60.11:0,60,2306	0/0:6,0:6:12.03:0,12,644	0/0:79,0:79:99:0,187,10836	0/0:9,0:9:27.06:0,27,1474	0/0:5,0:5:15.03:0,15,867	0/0:46,0:46:99:0,123,7761	0/0:11,0:11:24.08:0,24,1604	0/0:20,0:20:57.18:0,57,3033	0/0:21,0:21:48.15:0,48,2568	0/0:13,0:13:33.10:0,33,2198
chr10	55918856	.	TG	T	7646.87	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=11.505;DP=777;FS=0.601;HRun=4;HaplotypeScore=78.8751;InbreedingCoeff=0.9975;MQ=83.69;MQ0=0;MQRankSum=-0.935;QD=32.54;ReadPosRankSum=2.167;VQSLOD=5.4428;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,120,1676	0/0:6,0:6:15.03:0,15,210	0/0:24,1:25:58.46:0,58,693	0/0:21,0:21:54.14:0,54,698	0/0:24,0:24:72.22:0,72,979	1/1:1,14:15:42.13:504,42,0	1/1:1,27:28:78.24:936,78,0	0/0:25,0:25:69.23:0,69,966	0/0:27,0:27:75.24:0,75,1035	0/0:37,0:37:99:0,102,1388	0/0:28,0:28:84.28:0,84,1172	1/1:1,44:45:99:1365,114,0	0/0:36,0:36:99:0,108,1488	0/0:40,0:40:99:0,120,1645	0/0:23,0:23:69.23:0,69,961	1/1:0,23:23:66.20:792,66,0	1/1:1,34:35:96.29:1152,96,0	1/1:1,20:21:60.18:720,60,0	0/0:18,0:18:51.16:0,51,697	0/0:34,0:34:96.32:0,96,1340	0/0:61,0:61:99:0,175,2384	1/1:2,22:24:63.15:740,63,0	1/1:1,13:14:36.11:431,36,0	1/1:2,28:30:84.26:1008,84,0	0/0:23,0:23:66.22:0,66,922	0/0:22,0:22:66.22:0,66,924	0/0:26,0:25:78.24:0,78,1073	0/0:22,0:22:66.20:0,66,905
chr10	55921022	.	A	ATATT	2324.20	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-6.600;DP=567;FS=1.388;HRun=0;HaplotypeScore=87.1122;InbreedingCoeff=0.9785;MQ=64.95;MQ0=0;MQRankSum=-2.078;QD=43.04;ReadPosRankSum=0.416;VQSLOD=4.0247;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,15:22:42.14:1004,42,0	0/0:10,0:10:27.09:0,27,453	0/0:9,0:9:21.04:0,21,300	0/0:6,0:6:11.55:0,12,189	1/1:10,20:31:63.09:1442,63,0	0/0:23,0:23:51.17:0,51,833	0/0:19,0:19:39.12:0,39,631	0/0:41,0:41:63.17:0,63,953	0/0:15,0:15:42.13:0,42,680	0/0:27,0:27:66.23:0,66,1106	0/0:18,0:18:45.12:0,45,682	0/0:12,0:12:30.09:0,30,480	0/0:22,0:22:57.19:0,57,932	0/0:17,0:17:36.12:0,36,579	0/0:22,0:22:51.17:0,51,854	0/0:12,0:12:33.10:0,33,529	0/0:35,0:35:84.29:0,84,1406	0/0:22,0:22:51.13:0,51,810	0/0:24,0:24:51.15:0,51,822	0/0:25,0:25:54.18:0,54,907	0/0:18,0:18:33.11:0,33,554	0/0:12,0:12:30.10:0,30,504	0/0:13,0:13:27.08:0,27,428	0/0:13,0:13:33.06:0,33,496	0/0:29,0:29:72.23:0,72,1158	0/0:23,0:23:57.18:0,57,927	0/0:29,0:29:78.27:0,78,1310	0/0:17,0:17:42.14:0,42,705
chr10	55921469	.	CTGCCATTTTAT	C	9456.76	PASS	AB=0.579;AC=21;AF=0.375;AN=56;BaseQRankSum=14.058;DP=518;FS=3.740;HRun=0;HaplotypeScore=161.2722;InbreedingCoeff=0.9035;MQ=69.01;MQ0=0;MQRankSum=-12.097;QD=53.43;ReadPosRankSum=1.321;VQSLOD=4.8325;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:81.28:0,81,4375	1/1:0,11:11:27.09:977,27,0	0/0:14,0:14:37.37:0,37,1176	0/0:4,0:4:10.57:0,11,303	0/0:21,0:21:63.22:0,63,3526	1/1:2,23:25:51.18:1844,51,0	1/1:3,11:14:15.05:531,15,0	1/1:5,20:25:59.94:1149,60,0	0/0:16,0:16:48.16:0,48,2564	0/0:26,0:26:78.27:0,78,4073	0/0:24,0:24:72.25:0,72,3628	1/1:2,6:8:18.06:637,18,0	0/0:15,0:15:45.14:0,45,2412	0/0:16,0:16:45.15:0,45,2556	0/0:24,0:24:72.23:0,72,3868	0/1:6,16:22:99:1053,0,105	1/1:2,19:21:18.06:631,18,0	1/1:2,13:15:12.04:435,12,0	0/0:30,0:30:81.28:0,81,3833	0/0:25,0:25:75.26:0,75,4280	0/0:21,0:21:60.17:0,60,3011	1/1:4,4:8:18.06:519,18,0	1/1:1,14:15:35.86:1259,36,0	1/1:3,10:13:14.97:421,15,0	0/0:18,0:18:54.18:0,54,2600	0/0:22,0:22:66.23:0,66,3828	0/0:29,0:29:84.28:0,84,3839	0/0:6,0:6:18.06:0,18,1009
chr10	55921537	.	T	TCA	6876.66	PASS	AB=0.717;AC=36;AF=0.643;AN=56;BaseQRankSum=-2.220;DP=581;FS=2.332;HRun=0;HaplotypeScore=119.7006;InbreedingCoeff=0.4593;MQ=65.16;MQ0=5;MQRankSum=1.393;QD=16.73;ReadPosRankSum=0.168;VQSLOD=5.0746;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:26:22.73:0,23,112	0/1:8,0:8:2.04:2,0,29	0/0:32,0:22:8.65:0,9,61	0/0:25,0:12:2.94:0,3,18	0/0:5,0:31:39.73:0,40,195	1/1:21,4:25:18.06:267,18,0	1/1:13,1:14:18.04:238,18,0	0/0:24,0:23:8.31:0,8,157	1/1:6,5:11:9.03:134,9,0	1/1:8,19:28:24.49:625,24,0	0/1:11,11:22:72.63:206,0,73	1/1:6,2:8:14.84:153,15,0	0/0:12,0:17:29.64:0,30,295	0/0:14,0:14:38.94:0,39,422	1/1:13,9:22:13.86:592,14,0	1/1:9,5:14:17.76:268,18,0	1/1:16,9:25:47.89:657,48,0	1/1:18,6:24:46.92:613,47,0	1/1:13,2:15:12.04:164,12,0	0/1:6,12:20:40.24:260,0,40	0/1:13,6:20:71.12:71,0,133	1/1:14,6:20:9.06:326,9,0	1/1:13,9:22:27.15:419,27,0	1/1:12,8:20:36.05:503,36,0	0/1:12,15:30:36.37:295,0,36	1/1:6,18:25:3.23:573,3,0	0/1:18,13:32:81.89:418,0,82	1/1:3,1:4:8.99:93,9,0
chr10	55921568	.	G	GAC	5721.52	PASS	AB=0.667;AC=21;AF=0.375;AN=56;BaseQRankSum=2.127;DP=626;FS=29.209;HRun=0;HaplotypeScore=117.6265;InbreedingCoeff=0.8418;MQ=55.51;MQ0=13;MQRankSum=-2.359;QD=25.77;ReadPosRankSum=0.596;VQSLOD=3.4903;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:31:52.05:0,52,628	0/1:3,3:6:31.30:43,0,31	0/0:17,0:9:15.02:0,15,162	0/0:32,0:8:18.03:0,18,198	0/0:37,0:37:69.12:0,69,790	1/1:20,4:24:47.08:621,47,0	1/1:14,0:14:18.53:276,19,0	1/1:24,0:24:35.40:451,35,0	0/0:9,0:9:13.87:0,14,123	0/0:32,0:31:56.19:0,56,568	0/0:19,0:19:4.01:0,4,184	1/1:8,3:11:30.06:438,30,0	0/0:21,0:21:32.80:0,33,403	0/0:22,0:22:57.18:0,57,700	0/0:22,0:22:31.12:0,31,225	1/1:8,7:15:23.82:348,24,0	1/1:17,12:29:67.07:975,67,0	1/1:26,7:33:48.87:814,49,0	0/0:14,0:13:0.18:0,0,181	0/0:30,0:29:48.34:0,48,517	0/0:22,0:22:25.84:0,26,299	1/1:5,14:20:29.99:446,30,0	1/1:10,9:19:39.12:594,39,0	1/1:18,8:26:48.88:716,49,0	0/0:28,0:28:28.53:0,29,299	0/0:28,0:28:36.19:0,36,366	0/0:25,0:24:5.25:0,5,238	0/0:13,0:13:27.93:0,28,299
chr10	55923345	.	TA	T	5834.17	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=8.421;DP=401;FS=3.967;HRun=2;HaplotypeScore=43.8255;InbreedingCoeff=0.9823;MQ=80.64;MQ0=0;MQRankSum=-2.656;QD=36.01;ReadPosRankSum=2.455;VQSLOD=5.1289;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:26:81.25:0,81,1174	1/1:0,3:3:9.03:117,9,0	0/0:13,0:12:33.10:0,33,483	0/0:17,0:17:39.09:0,39,560	0/0:15,0:15:42.14:0,42,628	1/1:0,17:17:42.14:545,42,0	1/1:0,24:24:72.23:935,72,0	1/1:1,25:26:75.24:973,75,0	0/0:12,0:12:36.10:0,36,501	0/0:22,0:22:66.22:0,66,971	0/0:6,0:6:18.06:0,18,269	1/1:1,16:17:51.16:654,51,0	0/0:16,0:16:48.15:0,48,701	0/0:6,0:6:18.06:0,18,270	0/0:14,0:14:42.09:0,42,585	1/1:0,9:9:24.08:312,24,0	1/1:0,21:21:54.18:701,54,0	1/1:0,14:14:39.13:506,39,0	0/0:12,0:12:36.12:0,36,539	0/0:5,0:5:15.04:0,15,205	0/0:37,0:37:99:0,108,1573	1/1:0,8:8:21.07:273,21,0	1/1:0,9:9:24.08:312,24,0	1/1:1,13:14:39.13:506,39,0	0/0:5,0:5:15.04:0,15,206	0/0:10,0:10:30.10:0,30,449	0/0:16,0:16:45.10:0,45,630	0/0:6,0:6:18.02:0,18,245
chr10	55934000	.	AGT	A	6578.33	PASS	AC=26;AF=0.500;AN=52;BaseQRankSum=1.055;DP=705;FS=12.390;HRun=0;HaplotypeScore=120.9792;InbreedingCoeff=0.8420;MQ=62.12;MQ0=17;MQRankSum=2.982;QD=21.36;ReadPosRankSum=5.602;VQSLOD=4.7013;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:12,37:49:61.17:1157,61,0	./.	0/0:68,0:26:33.56:0,34,493	0/0:57,0:26:21.07:0,21,314	1/1:10,7:16:15.04:177,15,0	0/0:15,0:17:3:0,3,26	0/0:37,0:34:10.74:0,11,76	0/0:23,0:20:12.03:0,12,137	1/1:9,16:25:48.14:565,48,0	1/1:10,16:26:50.98:579,51,0	1/1:1,8:9:18.05:212,18,0	./.	0/0:23,1:24:18.48:0,18,744	0/0:20,1:21:3.79:0,4,527	1/1:1,13:15:38.95:438,39,0	0/0:15,0:15:5.99:0,6,66	0/0:21,0:22:3.42:0,3,27	0/0:19,0:23:18.05:0,18,225	1/1:10,10:20:32.89:343,33,0	1/1:6,5:11:15.04:177,15,0	1/1:18,37:55:99:1272,108,0	0/0:18,0:18:11.91:0,12,112	0/0:17,0:16:11.92:0,12,107	0/0:36,0:35:5.96:0,6,64	1/1:2,14:16:35.68:424,36,0	1/1:12,15:30:53.64:562,54,0	1/1:6,22:28:54.16:636,54,0	1/1:4,2:6:3.01:35,3,0
chr10	55934320	.	C	CG	229.97	PASS	AB=1.000;AC=21;AF=0.700;AN=30;BaseQRankSum=-1.336;DP=90;FS=12.916;HRun=9;HaplotypeScore=14.8106;InbreedingCoeff=0.5082;MQ=91.97;MQ0=0;MQRankSum=-2.948;QD=6.22;ReadPosRankSum=-1.106;VQSLOD=-0.5228;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:13,0:7:15.23:0,15,108	0/0:10,0:7:5.43:0,5,25	./.	./.	1/1:4,3:7:3.01:30,3,0	1/1:3,0:4:0.89:2,1,0	1/1:4,0:5:5.81:34,6,0	./.	1/1:2,0:2:0.47:1,0,0	1/1:1,2:3:3:28,3,0	0/0:4,0:4:8.98:0,9,77	0/0:4,0:4:12:0,12,104	./.	1/1:1,2:3:6.02:66,6,0	1/1:1,5:6:9.02:99,9,0	1/1:0,2:2:3.01:33,3,0	./.	./.	./.	./.	./.	1/1:0,1:1:3.01:33,3,0	0/1:3,0:3:0:0,0,0	./.	./.	1/1:0,0:1:2.80:13,3,0
chr10	55934904	.	ATGAG	A	860.41	PASS	AB=0.822;AC=7;AF=0.125;AN=56;BaseQRankSum=5.105;DP=693;FS=34.470;HRun=0;HaplotypeScore=176.8913;InbreedingCoeff=-0.1436;MQ=67.77;MQ0=4;MQRankSum=-6.109;QD=5.12;ReadPosRankSum=-5.031;VQSLOD=-0.3191;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,10:33:20.53:0,21,576	0/0:8,0:8:21.07:0,21,517	0/0:40,0:28:78.65:0,79,1963	0/0:28,0:20:57.16:0,57,1415	0/0:12,1:13:27.09:0,27,731	0/0:17,0:18:32.01:0,32,825	0/0:42,0:42:45.17:0,45,1643	0/0:17,0:16:45.05:0,45,1268	0/1:20,13:32:99:126,0,1163	0/1:12,5:17:99:203,0,993	0/0:12,4:16:33.11:0,33,935	0/0:26,0:26:31.20:0,31,990	0/0:22,0:22:66.23:0,66,1880	0/0:28,0:28:78.27:0,78,2211	0/0:19,6:23:35.86:0,36,981	0/0:29,0:29:24.75:0,25,1247	0/0:28,0:27:48.14:0,48,1237	0/0:32,0:32:92.31:0,92,2415	0/1:7,1:8:38.81:39,0,512	0/0:19,4:21:48.16:0,48,1349	0/0:46,3:47:68.69:0,69,1800	0/0:15,0:15:27.09:0,27,780	0/0:14,0:14:23.96:0,24,676	0/1:44,0:44:37.09:37,0,1605	0/0:15,2:17:35.86:0,36,979	0/1:23,3:25:50.13:50,0,1814	0/1:15,7:22:99:169,0,785	0/1:11,7:18:99:367,0,515
chr10	55934911	.	T	TACACAC	7361.79	PASS	AB=0.720;AC=46;AF=0.821;AN=56;BaseQRankSum=1.621;DP=745;FS=5.330;HRun=0;HaplotypeScore=200.4130;InbreedingCoeff=0.6025;MQ=57.93;MQ0=5;MQRankSum=-3.289;QD=11.58;ReadPosRankSum=-2.848;VQSLOD=3.5405;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:34,0:33:3.01:49,3,0	1/1:2,0:9:8.99:116,9,0	0/0:30,0:17:2.75:0,3,61	0/0:26,0:18:5.12:0,5,122	1/1:14,0:14:6.02:90,6,0	0/1:17,5:24:31.92:442,0,32	1/1:19,16:49:19.61:329,20,0	1/1:21,0:20:19.29:238,19,0	1/1:38,0:36:40.39:445,40,0	1/1:25,0:25:35.18:427,35,0	1/1:18,0:17:8.71:86,9,0	1/1:26,5:32:33.05:589,33,0	0/0:19,0:22:41.76:0,42,805	0/0:29,0:31:63.22:0,63,1213	1/1:24,0:22:10.17:146,10,0	1/1:20,12:33:38.44:905,38,0	1/1:11,12:28:15.05:329,15,0	1/1:26,5:37:52.96:1203,53,0	1/1:10,0:10:9.02:107,9,0	1/1:23,0:21:8.35:54,8,0	1/1:53,0:51:14.59:168,15,0	1/1:16,5:22:9:88,9,0	0/1:7,6:14:0.03:0,0,0	1/1:34,6:43:25.59:518,26,0	1/1:20,0:20:7.24:53,7,0	1/1:27,0:26:35.12:329,35,0	1/1:20,0:20:8.02:293,8,0	1/1:17,0:17:28.33:357,28,0
chr10	55935044	.	T	TGATG	19874.61	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-15.409;DP=757;FS=13.397;HRun=0;HaplotypeScore=124.5013;InbreedingCoeff=0.9996;MQ=81.26;MQ0=0;MQRankSum=-5.283;QD=67.37;ReadPosRankSum=4.208;VQSLOD=6.6587;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,154,2934	1/1:0,11:11:24.08:610,24,0	0/0:25,0:25:72.23:0,72,1342	0/0:27,0:27:68.16:0,68,1133	0/0:25,0:25:71.61:0,72,1356	1/1:1,16:18:48.16:1341,48,0	1/1:3,25:29:72.25:1982,72,0	1/1:7,17:23:69.24:1814,69,0	0/0:33,0:33:99:0,99,1951	0/0:27,0:27:81.28:0,81,1574	0/0:11,0:11:33.11:0,33,619	1/1:4,33:38:90.31:2438,90,0	0/0:26,0:26:75.24:0,75,1442	0/0:39,0:39:99:0,117,2265	0/0:32,0:32:93.32:0,93,1857	1/1:2,35:37:99:2877,105,0	1/1:1,25:26:66.23:1845,66,0	1/1:3,24:28:75.26:2088,75,0	0/0:17,0:17:45.15:0,45,899	0/0:15,0:15:42.11:0,42,714	0/0:54,0:54:99:0,148,2874	1/1:3,24:27:69.24:1890,69,0	1/1:1,22:23:54.13:1394,54,0	1/1:5,29:34:57.67:1594,58,0	0/0:23,0:23:63.21:0,63,1198	0/0:17,0:17:51.18:0,51,1019	0/0:24,0:24:66.23:0,66,1298	0/0:12,0:12:36.12:0,36,718
chr10	55935342	.	GTGTGTGT	G	1377.78	PASS	AB=0.980;AC=20;AF=0.357;AN=56;BaseQRankSum=4.774;DP=640;FS=6.793;HRun=0;HaplotypeScore=181.0873;InbreedingCoeff=-0.0258;MQ=51.88;MQ0=48;MQRankSum=1.308;QD=4.02;ReadPosRankSum=-1.796;VQSLOD=1.9625;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:31:5.88:6,0,150	1/1:7,0:7:2.90:23,3,0	0/0:38,0:8:23.93:0,24,261	0/0:40,0:14:36.10:0,36,433	1/1:20,0:18:21.70:130,22,0	0/0:17,0:18:37.43:0,37,622	0/0:28,0:24:22.47:0,22,286	0/0:28,0:28:42.84:0,43,301	0/1:24,0:23:0.14:148,0,0	0/1:23,0:21:67.37:67,0,126	0/1:14,2:15:13.44:193,0,13	0/0:25,0:23:25.87:0,26,231	0/0:19,0:17:7.25:0,7,490	0/0:16,0:15:29.31:0,29,519	0/1:21,2:22:31.13:166,0,31	0/1:13,0:11:23.23:23,0,142	0/0:28,0:26:10.93:0,11,82	0/1:17,0:17:0.39:0,0,27	0/1:16,0:14:91.88:114,0,92	0/1:19,1:19:22.08:116,0,22	1/1:43,0:36:42.72:192,43,0	0/0:20,0:20:0.42:0,0,2	0/1:21,0:20:9.10:9,0,101	0/0:37,0:35:61.22:0,61,700	0/1:12,0:12:23.69:40,0,24	0/1:26,0:22:91:150,0,91	0/1:19,1:18:92.54:95,0,93	0/1:9,0:7:5.47:68,0,5
chr10	55935348	.	GT	G	1461.33	PASS	AB=0.913;AC=22;AF=0.393;AN=56;BaseQRankSum=5.235;DP=649;FS=4.792;HRun=2;HaplotypeScore=138.4923;InbreedingCoeff=0.0166;MQ=54.28;MQ0=45;MQRankSum=0.809;QD=4.00;ReadPosRankSum=-2.088;VQSLOD=-0.2301;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:29:4.05:8,0,4	1/1:6,2:8:2.90:23,3,0	0/0:46,0:12:27.61:0,28,327	0/0:42,0:16:39.11:0,39,472	1/1:17,0:16:21.69:152,22,0	0/0:16,1:17:37.11:0,37,296	0/0:28,0:24:23.73:0,24,153	0/0:30,0:30:45.72:0,46,298	1/1:19,4:23:2.57:185,3,0	0/1:25,0:23:99:109,0,119	0/1:15,2:17:3.54:146,0,4	0/0:23,0:21:23.01:0,23,159	0/1:17,3:18:1.26:1,0,367	0/0:15,2:16:34.92:0,35,415	0/1:22,3:24:6.42:122,0,6	0/1:14,1:13:26.52:27,0,43	0/0:26,2:26:9.14:0,9,58	0/1:17,0:18:9.43:13,0,9	0/1:16,2:16:80.65:119,0,81	0/1:16,5:20:15.24:144,0,15	1/1:39,1:33:42.89:192,43,0	0/0:16,0:16:0.89:0,1,2	0/1:22,0:21:16.66:17,0,30	0/0:37,0:35:46.27:0,46,252	0/1:10,2:12:19.87:49,0,20	0/1:23,1:21:89.64:182,0,90	0/1:15,4:17:54.14:54,0,93	0/1:8,2:9:2.26:84,0,2
chr10	55935349	.	TTG	T	2945.04	PASS	AB=0.815;AC=18;AF=0.321;AN=56;BaseQRankSum=-5.499;DP=637;FS=2.239;HRun=0;HaplotypeScore=138.9908;InbreedingCoeff=0.7288;MQ=54.47;MQ0=45;MQRankSum=0.848;QD=14.02;ReadPosRankSum=-0.139;VQSLOD=3.1965;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:29:8.91:0,9,65	1/1:2,6:8:2.97:20,3,0	0/0:46,0:12:27.08:0,27,309	0/0:42,0:16:39:0,39,467	0/0:12,0:15:20.35:0,20,151	0/1:17,0:17:41.08:190,0,41	1/1:27,0:23:38.82:437,39,0	1/1:10,20:30:57.15:671,57,0	0/0:21,0:21:39.03:0,39,377	0/0:23,0:21:44.86:0,45,381	0/0:17,0:17:16.43:0,16,248	1/1:22,0:20:23.82:270,24,0	0/0:20,0:18:32.56:0,33,418	0/0:16,1:16:2.68:0,3,435	0/0:25,0:24:39.95:0,40,452	1/1:15,0:13:23.84:274,24,0	0/0:12,16:26:0:0,0,0	0/1:7,10:17:26.75:27,0,31	0/0:18,0:16:19.22:0,19,219	0/0:20,0:19:28.51:0,29,331	0/0:38,0:32:48.66:0,49,453	1/1:0,16:16:14.40:96,14,0	1/1:22,0:21:41.78:449,42,0	1/1:35,0:34:61.94:709,62,0	0/0:12,0:12:23.96:0,24,220	0/0:24,0:21:41.02:0,41,383	0/0:18,0:17:6.40:0,6,145	0/0:10,0:9:18:0,18,183
chr10	55935354	.	T	TGT	5231.91	PASS	AB=0.940;AC=26;AF=0.464;AN=56;BaseQRankSum=-6.661;DP=632;FS=7.249;HRun=0;HaplotypeScore=127.9808;InbreedingCoeff=0.6184;MQ=56.33;MQ0=43;MQRankSum=-1.918;QD=16.05;ReadPosRankSum=0.017;VQSLOD=4.6279;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:32,0:31:6.02:79,6,0	0/0:8,0:8:0:0,0,0	0/0:49,0:15:25.59:0,26,226	0/0:46,0:19:35.64:0,36,351	1/1:8,7:16:23.90:256,24,0	0/0:17,0:17:18.30:0,18,98	0/0:27,0:23:29.46:0,29,150	0/0:31,0:31:46.42:0,46,226	1/1:20,0:20:5.98:551,6,0	1/1:20,0:18:39.12:587,39,0	0/1:15,0:15:0.20:382,0,0	0/0:20,0:18:19.38:0,19,96	0/0:19,0:17:23.98:0,24,278	0/0:18,0:17:36.02:0,36,408	1/1:28,0:27:49.73:768,50,0	0/0:13,0:12:18.56:0,19,88	0/1:28,0:26:0.21:0,0,0	0/1:17,0:17:19.21:37,0,19	1/1:14,0:12:23.54:288,24,0	1/1:20,0:19:5.88:479,6,0	1/1:33,0:28:51.17:740,51,0	0/1:18,0:18:0:0,0,1	0/0:23,0:22:31.39:0,31,166	0/0:34,0:32:59.36:0,59,316	0/1:13,0:13:12.18:263,0,12	1/1:22,0:20:6.61:489,7,0	0/1:8,8:17:48.78:83,0,49	1/1:10,0:9:18.05:229,18,0
chr10	55935676	.	AG	A	16616.34	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=3.104;DP=653;FS=3.182;HRun=5;HaplotypeScore=70.4527;InbreedingCoeff=0.9894;MQ=84.51;MQ0=0;MQRankSum=-7.311;QD=29.67;ReadPosRankSum=2.710;VQSLOD=5.5648;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,42:43:99:1258,111,0	1/1:0,12:12:30.01:340,30,0	0/0:24,0:24:66.21:0,66,882	0/0:25,0:25:63.19:0,63,815	1/1:0,14:14:36.06:393,36,0	1/1:0,22:22:63.18:714,63,0	1/1:0,32:32:81.23:918,81,0	1/1:2,30:32:90.22:994,90,0	1/1:1,34:35:99:1157,102,0	1/1:0,24:24:72.20:809,72,0	1/1:1,13:14:32.65:337,33,0	1/1:0,18:18:48.14:544,48,0	0/0:25,0:25:72.15:0,72,957	0/0:19,0:19:54.18:0,54,734	1/1:0,33:33:93.27:1055,93,0	1/1:2,28:30:75.21:851,75,0	1/1:2,22:24:60.17:681,60,0	1/1:2,15:17:39.11:442,39,0	1/1:1,14:15:42.11:467,42,0	1/1:0,11:10:27.08:306,27,0	1/1:1,50:51:99:1565,138,0	1/1:1,21:22:60.56:653,61,0	1/1:2,12:14:36.02:377,36,0	1/1:2,23:25:63.18:715,63,0	1/1:1,10:11:21.06:238,21,0	1/1:0,28:28:81.23:919,81,0	1/1:0,25:25:66.19:748,66,0	1/1:2,6:8:11.85:136,12,0
chr10	55937048	.	A	ATT	1994.95	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=5.777;DP=484;FS=4.980;HRun=2;HaplotypeScore=92.5021;InbreedingCoeff=0.9366;MQ=60.50;MQ0=2;MQRankSum=-10.070;QD=17.05;ReadPosRankSum=-0.385;VQSLOD=0.9358;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,123,1873	0/0:6,0:6:9.39:0,9,62	0/0:9,0:5:9.02:0,9,127	0/0:5,0:4:8.05:0,8,80	0/0:26,0:26:65.18:0,65,966	1/1:3,3:7:10.24:140,10,0	1/1:6,7:14:25.35:283,25,0	0/0:34,0:34:19.91:0,20,297	0/0:10,0:9:21.07:0,21,313	0/0:20,0:20:57.19:0,57,883	0/0:20,0:20:57.18:0,57,852	1/1:4,5:10:23.97:259,24,0	0/0:20,0:20:60.20:0,60,958	0/0:17,0:17:45.15:0,45,719	0/0:19,0:19:45.14:0,45,670	1/1:5,4:11:19.91:239,20,0	1/1:4,10:21:43.06:460,43,0	1/1:10,2:16:13.35:150,13,0	0/0:24,0:23:65.03:0,65,979	0/0:17,0:17:48.16:0,48,730	0/0:12,0:12:33.09:0,33,482	1/1:4,2:6:6.42:81,6,0	1/1:11,5:18:13.99:304,14,0	1/1:0,8:10:23.29:287,23,0	0/0:16,0:16:40.16:0,40,649	0/0:34,0:34:97.34:0,97,1523	0/0:25,0:24:53.32:0,53,858	0/0:5,0:5:15.05:0,15,224
chr10	55938717	.	GGGA	G	2803.40	PASS	AB=1.000;AC=30;AF=0.536;AN=56;BaseQRankSum=8.181;DP=584;FS=67.276;HRun=0;HaplotypeScore=128.2081;InbreedingCoeff=0.6419;MQ=68.57;MQ0=3;MQRankSum=-5.637;QD=7.24;ReadPosRankSum=3.712;VQSLOD=0.1034;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:33:41.89:42,0,546	1/1:10,1:11:24.44:136,24,0	0/0:22,0:22:62.71:0,63,1219	0/0:20,0:20:60.19:0,60,1129	0/1:14,0:14:42:42,0,60	0/0:13,0:13:1.98:0,2,196	0/0:17,0:17:29.75:0,30,249	1/1:22,0:22:53.34:289,53,0	1/1:24,2:26:53.33:293,53,0	1/1:35,0:35:73.76:357,74,0	1/1:16,0:16:29.45:123,29,0	0/1:15,0:15:27.90:28,0,220	0/0:30,0:30:90.29:0,90,1911	0/0:33,0:33:90.22:0,90,1869	1/1:24,1:25:43.15:211,43,0	0/0:12,0:12:21.07:0,21,159	0/1:33,0:33:72.27:72,0,474	0/0:15,0:15:6.88:0,7,208	1/1:15,2:17:36.75:275,37,0	1/1:21,0:21:26.54:105,27,0	1/1:48,0:48:79.19:327,79,0	0/0:8,0:8:7.91:0,8,44	0/0:9,0:9:5.91:0,6,38	0/0:18,0:18:42.01:0,42,317	1/1:17,0:17:29.46:117,29,0	1/1:19,3:21:50.08:341,50,0	1/1:24,0:24:50.88:204,51,0	1/1:8,0:6:13.39:54,13,0
chr10	55938718	.	GGA	G	9638.74	PASS	AB=0.992;AC=38;AF=0.679;AN=56;BaseQRankSum=0.348;DP=588;FS=17.381;HRun=0;HaplotypeScore=95.7178;InbreedingCoeff=0.1974;MQ=68.53;MQ0=3;MQRankSum=-3.752;QD=20.12;ReadPosRankSum=1.074;VQSLOD=3.9538;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:34,0:34:99:125,0,267	1/1:2,9:11:27.07:385,27,0	0/0:22,0:22:63.19:0,63,1003	0/0:22,0:22:66.20:0,66,1000	0/1:14,0:14:11.66:64,0,12	0/1:13,0:13:62.33:62,0,83	0/1:18,1:19:55.39:106,0,55	1/1:0,21:21:60.04:709,60,0	1/1:3,22:25:62.24:880,62,0	1/1:1,34:35:81.15:1118,81,0	1/1:2,14:16:32.92:469,33,0	0/1:15,0:15:57.51:58,0,60	0/0:31,0:31:93.29:0,93,1581	0/0:34,0:34:93.18:0,93,1529	1/1:1,23:24:51.10:722,51,0	0/1:12,0:12:7.11:7,0,58	0/1:32,1:33:99:177,0,191	0/1:15,0:15:53.89:59,0,54	1/1:4,13:17:42.01:483,42,0	1/1:1,20:21:30.10:450,30,0	1/1:4,44:48:98.45:1435,98,0	0/1:7,0:7:10.45:27,0,10	1/1:9,0:9:0.89:2,1,0	0/1:18,0:18:39.79:40,0,72	1/1:0,17:17:33.11:497,33,0	1/1:4,18:21:54:674,54,0	1/1:1,23:24:57.19:861,57,0	1/1:2,7:7:15.05:227,15,0
chr10	55938719	.	GA	G	6761.70	PASS	AB=0.920;AC=46;AF=0.821;AN=56;BaseQRankSum=5.021;DP=587;FS=2.587;HRun=1;HaplotypeScore=98.0969;InbreedingCoeff=0.6832;MQ=68.57;MQ0=3;MQRankSum=-7.576;QD=14.12;ReadPosRankSum=-1.521;VQSLOD=3.7955;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:33,1:34:37.22:283,0,37	1/1:10,0:10:26.57:171,27,0	0/0:22,0:22:63.16:0,63,800	0/0:22,0:22:66.19:0,66,836	1/1:13,1:14:8.53:107,9,0	1/1:11,2:13:1.78:161,2,0	1/1:16,4:20:31.17:404,31,0	1/1:21,0:21:59.46:430,59,0	1/1:24,1:25:60.59:399,61,0	1/1:34,0:34:79.95:546,80,0	1/1:14,2:16:32.43:210,32,0	1/1:14,1:15:11.57:235,12,0	0/0:31,0:31:93.28:0,93,1261	0/0:33,0:33:93.15:0,93,1211	1/1:24,0:24:49.96:325,50,0	1/1:11,3:14:8.26:184,8,0	0/1:28,5:33:4.03:410,0,4	1/1:12,3:15:17.03:226,17,0	1/1:16,0:16:41.50:289,42,0	1/1:20,1:21:29.55:190,30,0	1/1:44,3:47:97.61:661,98,0	1/1:5,1:6:9.41:89,9,0	1/1:10,0:10:8.94:67,9,0	1/1:14,5:19:13.16:359,13,0	1/1:17,0:17:32.52:211,33,0	1/1:22,0:21:53.16:344,53,0	1/1:23,1:24:55.89:366,56,0	1/1:9,0:7:14.78:97,15,0
chr10	55938797	.	TCA	T	8416.22	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=6.958;DP=558;FS=8.127;HRun=0;HaplotypeScore=139.4381;InbreedingCoeff=0.8704;MQ=56.33;MQ0=27;MQRankSum=-5.098;QD=20.68;ReadPosRankSum=3.125;VQSLOD=5.1141;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,23:27:36.07:418,36,0	1/1:4,2:6:6.02:72,6,0	0/0:40,0:18:35.75:0,36,470	0/0:58,0:33:5.42:0,5,408	1/1:4,4:8:11.99:128,12,0	1/1:1,10:10:26.91:303,27,0	1/1:8,12:19:27.07:312,27,0	1/1:5,25:30:72.22:868,72,0	1/1:8,21:27:57.17:686,57,0	1/1:10,14:23:51.15:607,51,0	1/1:4,8:12:14.92:165,15,0	1/1:4,7:10:27.08:326,27,0	0/0:18,0:18:45.14:0,45,683	0/0:34,1:33:69.24:0,69,1099	1/1:5,10:15:29.92:338,30,0	1/1:3,15:17:45.14:543,45,0	1/1:5,11:14:27.04:309,27,0	1/1:1,8:9:24.07:289,24,0	1/1:13,12:26:38.95:448,39,0	1/1:7,5:12:6.02:72,6,0	1/1:17,17:33:44.35:500,44,0	1/1:1,8:9:11.99:128,12,0	1/1:3,8:10:9.02:107,9,0	1/1:3,14:17:24.07:285,24,0	1/1:4,7:11:18.06:217,18,0	1/1:5,13:18:44.80:499,45,0	1/1:5,14:18:48.15:578,48,0	1/1:1,6:7:18.05:217,18,0
chr10	55938820	.	CAG	C	1011.55	PASS	AB=0.976;AC=38;AF=0.679;AN=56;BaseQRankSum=7.674;DP=546;FS=1.470;HRun=0;HaplotypeScore=171.6285;InbreedingCoeff=0.0721;MQ=46.81;MQ0=46;MQRankSum=-7.698;QD=2.33;ReadPosRankSum=-1.751;VQSLOD=2.4684;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:24:8.96:87,9,0	0/0:2,0:2:2.99:0,3,24	0/0:44,0:9:3:0,3,25	0/0:58,0:18:3.48:0,3,37	1/1:4,0:4:2.99:24,3,0	0/1:15,0:13:5.17:60,0,5	1/1:19,0:18:11.97:54,12,0	0/1:39,0:38:62.30:73,0,62	1/1:22,0:20:26.07:150,26,0	0/1:22,0:20:1.32:2,0,1	1/1:10,0:10:5.25:27,5,0	1/1:13,0:12:21.76:95,22,0	0/1:18,3:21:27.05:27,0,463	0/1:28,4:30:44.28:44,0,709	1/1:17,0:16:4.01:86,4,0	0/1:20,0:19:8.50:42,0,8	1/1:14,0:12:7.02:30,7,0	0/1:14,0:14:13.27:16,0,13	0/1:23,0:20:10.69:61,0,11	0/1:5,0:5:0:0,0,0	1/1:27,0:26:4.98:24,5,0	1/1:11,0:10:13.15:71,13,0	1/1:12,0:12:3.20:11,3,0	0/1:19,0:18:8.77:9,0,23	1/1:9,0:9:4.99:24,5,0	1/1:20,0:19:23.42:103,23,0	1/1:21,0:20:15.09:41,15,0	0/0:8,0:7:3.06:0,3,47
chr10	55938830	.	G	GAA	8582.08	PASS	AB=1.000;AC=47;AF=0.839;AN=56;BaseQRankSum=8.312;DP=515;FS=14.246;HRun=1;HaplotypeScore=146.4213;InbreedingCoeff=0.8005;MQ=45.96;MQ0=41;MQRankSum=-7.620;QD=23.07;ReadPosRankSum=-0.305;VQSLOD=1.9814;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:22:18.15:280,18,0	1/1:2,0:2:5.98:47,6,0	0/0:37,0:5:14.18:0,14,107	0/0:58,0:14:13.21:0,13,167	0/1:6,0:6:31.06:59,0,31	1/1:9,4:13:32.68:332,33,0	1/1:16,5:21:38.78:355,39,0	1/1:21,11:31:84.09:1163,84,0	1/1:12,9:20:59.85:773,60,0	1/1:19,3:21:25.03:474,25,0	1/1:6,1:7:18.36:167,18,0	1/1:11,2:13:32.39:340,32,0	0/0:20,0:20:56.21:0,56,636	0/0:28,0:27:71.97:0,72,933	1/1:14,3:17:36.40:445,36,0	1/1:12,6:18:44.72:424,45,0	1/1:12,1:13:31.28:259,31,0	1/1:12,3:15:38.75:424,39,0	1/1:16,6:16:19.14:537,19,0	1/1:6,0:6:6.78:74,7,0	1/1:15,8:23:39.63:367,40,0	1/1:10,1:11:23.90:273,24,0	1/1:9,0:9:17.79:119,18,0	1/1:13,6:19:29.51:273,30,0	1/1:6,1:7:17.75:151,18,0	1/1:18,6:24:28.29:616,28,0	1/1:18,2:20:38.38:446,38,0	1/1:7,0:6:17.70:184,18,0
chr10	55938842	.	GAGAGAC	G	6801	PASS	AB=1.000;AC=43;AF=0.768;AN=56;BaseQRankSum=6.827;DP=489;FS=1.282;HRun=0;HaplotypeScore=155.4902;InbreedingCoeff=0.5579;MQ=44.06;MQ0=37;MQRankSum=-6.878;QD=19.10;ReadPosRankSum=1.263;VQSLOD=4.3844;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:19,4:20:29.78:321,30,0	0/0:1,0:1:2.99:0,3,24	0/0:28,0:3:6:0,6,52	0/0:55,0:6:5.25:0,5,59	1/1:5,1:6:17.88:134,18,0	0/1:14,0:14:2.12:265,0,2	1/1:19,0:19:14.94:222,15,0	1/1:29,0:27:22.65:429,23,0	1/1:22,0:22:40.16:415,40,0	1/1:19,0:18:49.55:541,50,0	1/1:7,0:7:11.90:140,12,0	1/1:16,0:16:27.51:432,28,0	0/0:19,0:19:19.33:0,19,1051	0/0:29,0:29:40.31:0,40,1400	1/1:16,0:16:17.98:482,18,0	1/1:15,0:15:1.35:289,1,0	1/1:14,0:14:26.72:248,27,0	1/1:15,0:15:14.19:314,14,0	1/1:22,0:17:14.13:404,14,0	1/1:6,0:6:8.99:86,9,0	1/1:17,0:17:17.55:141,18,0	1/1:14,0:14:17.97:247,18,0	1/1:14,0:14:7.30:116,7,0	0/1:20,0:20:11.12:87,0,11	1/1:3,0:3:9.01:118,9,0	1/1:20,0:20:53.91:714,54,0	1/1:18,0:18:42.06:608,42,0	0/1:7,0:6:42.98:46,0,43
chr10	55938846	.	GACAGAC	G	11039.40	PASS	AC=46;AF=0.852;AN=54;BaseQRankSum=6.293;DP=475;FS=6.223;HRun=0;HaplotypeScore=134.4646;InbreedingCoeff=0.7933;MQ=44.00;MQ0=36;MQRankSum=-6.696;QD=31.72;ReadPosRankSum=0.049;VQSLOD=4.3226;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:18:7.74:121,8,0	./.	0/0:30,0:2:6.01:0,6,79	0/0:48,0:7:13.66:0,14,188	1/1:8,0:8:2.66:9,3,0	1/1:4,9:13:18.06:393,18,0	1/1:6,11:17:15.05:311,15,0	1/1:25,0:25:64.49:949,64,0	1/1:16,4:20:48.11:735,48,0	1/1:16,4:19:57.12:965,57,0	1/1:5,2:7:14.99:261,15,0	1/1:3,14:17:30.09:617,30,0	0/0:19,0:19:34.23:0,34,1151	0/0:29,0:29:67.98:0,68,1542	1/1:7,7:14:36.12:729,36,0	1/1:8,7:15:27.06:482,27,0	1/1:13,3:16:33.02:469,33,0	1/1:11,4:15:35.98:601,36,0	1/1:15,5:16:13.61:710,14,0	1/1:3,1:4:9.03:150,9,0	1/1:18,1:19:23.97:350,24,0	1/1:2,10:12:18.06:351,18,0	1/1:2,13:15:8.71:166,9,0	1/1:18,1:19:20.96:277,21,0	1/1:2,1:3:9.03:177,9,0	1/1:13,6:19:57.19:1160,57,0	1/1:10,9:19:45.15:933,45,0	1/1:6,1:6:2:124,2,0
chr10	55938962	.	T	TTC	14807.37	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-7.405;DP=477;FS=13.952;HRun=0;HaplotypeScore=55.6371;InbreedingCoeff=0.9692;MQ=61.21;MQ0=15;MQRankSum=-1.420;QD=38.36;ReadPosRankSum=5.037;VQSLOD=5.8511;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,18:20:42.13:724,42,0	0/0:9,0:9:24.04:0,24,323	0/0:7,0:5:12.02:0,12,160	0/0:12,0:11:11.06:0,11,103	1/1:1,19:19:53.91:791,54,0	1/1:0,18:18:51.17:878,51,0	1/1:0,12:12:27.09:465,27,0	0/0:29,0:28:72.16:0,72,944	1/1:1,16:17:44.98:737,45,0	1/1:2,27:27:75.18:1162,75,0	1/1:0,16:16:44.86:672,45,0	1/1:0,13:13:27.09:464,27,0	0/0:18,0:18:51.01:0,51,654	0/0:16,0:15:45.09:0,45,597	1/1:2,19:21:42.14:724,42,0	1/1:4,15:17:50.32:800,50,0	1/1:1,8:8:15.05:259,15,0	1/1:4,12:14:36.12:621,36,0	1/1:2,23:24:69.14:1055,69,0	1/1:4,15:18:39.12:673,39,0	1/1:1,7:7:9.03:156,9,0	1/1:2,8:10:23.98:362,24,0	1/1:1,12:13:32.88:496,33,0	1/1:2,13:13:24.08:391,24,0	1/1:1,13:13:36.12:622,36,0	1/1:0,24:24:72.13:1100,72,0	1/1:1,25:25:66.22:1137,66,0	1/1:4,16:16:30.10:518,30,0
chr10	55939130	.	AC	A	3514.59	PASS	AB=0.927;AC=46;AF=0.958;AN=48;BaseQRankSum=2.305;DP=165;FS=0.000;HRun=2;HaplotypeScore=47.9785;InbreedingCoeff=0.0172;MQ=64.05;MQ0=9;MQRankSum=0.416;QD=21.30;ReadPosRankSum=4.913;VQSLOD=3.4897;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,3:3:9.03:109,9,0	./.	0/1:18,2:10:4.07:4,0,269	0/1:32,2:11:47.35:47,0,181	1/1:2,3:4:6.02:76,6,0	1/1:1,5:6:15.05:188,15,0	1/1:1,2:3:6.02:75,6,0	./.	1/1:0,3:3:9.03:113,9,0	1/1:0,5:5:15.05:185,15,0	1/1:0,6:6:18.06:221,18,0	1/1:2,4:6:12.04:151,12,0	1/1:0,7:7:21.07:272,21,0	1/1:0,3:3:9.03:117,9,0	1/1:0,3:2:6.02:76,6,0	1/1:0,6:6:18.06:227,18,0	1/1:0,1:1:3.01:38,3,0	1/1:0,2:2:6.02:75,6,0	./.	1/1:1,14:15:33.10:412,33,0	./.	1/1:0,3:3:9.03:112,9,0	1/1:0,3:3:9.03:113,9,0	1/1:0,2:2:3.01:38,3,0	1/1:0,8:6:18.06:226,18,0	1/1:1,6:6:15.05:186,15,0	1/1:1,12:12:33.11:416,33,0	1/1:0,1:1:3.01:38,3,0
chr10	55939147	.	C	CT	3210.76	PASS	AB=0.806;AC=49;AF=0.980;AN=50;BaseQRankSum=-2.163;DP=163;FS=16.335;HRun=5;HaplotypeScore=42.4571;InbreedingCoeff=-0.1011;MQ=57.42;MQ0=21;MQRankSum=-0.014;QD=20.19;ReadPosRankSum=1.332;VQSLOD=1.8996;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,1:1:3.01:39,3,0	1/1:0,1:1:3.01:39,3,0	1/1:14,6:9:15.05:197,15,0	0/1:22,7:10:18.41:68,0,18	1/1:1,5:5:12.04:158,12,0	1/1:2,3:4:9.03:118,9,0	1/1:0,2:2:6.02:79,6,0	./.	1/1:0,3:3:9.03:118,9,0	1/1:1,5:5:15.05:197,15,0	1/1:1,4:5:9.03:118,9,0	1/1:1,3:4:9.03:118,9,0	1/1:2,5:7:15.05:197,15,0	1/1:3,2:3:6.02:79,6,0	1/1:0,2:2:6.02:79,6,0	1/1:2,5:6:15.05:197,15,0	1/1:2,1:1:3.01:39,3,0	1/1:0,2:2:3.01:39,3,0	./.	1/1:2,11:13:27.09:354,27,0	./.	1/1:1,1:2:3.01:39,3,0	1/1:0,3:3:9.03:118,9,0	1/1:1,1:1:3.01:39,3,0	1/1:1,8:6:18.06:236,18,0	1/1:0,5:4:12.04:158,12,0	1/1:1,11:11:30.10:394,30,0	1/1:2,2:2:6.02:79,6,0
chr10	55939203	.	GTA	G	321.80	PASS	AC=10;AF=1.00;AN=10;DP=96;FS=0.000;HRun=0;HaplotypeScore=23.2877;MQ=14.80;MQ0=62;QD=12.87;VQSLOD=2.6763;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	1/1:0,1:1:3.01:39,3,0	./.	./.	1/1:3,5:7:15.05:195,15,0	./.	./.	./.	./.	1/1:4,1:2:3.01:39,3,0	./.	./.	./.	./.	1/1:2,1:1:3.01:39,3,0	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	1/1:6,2:2:6.02:78,6,0
chr10	55942900	.	GGGAA	G	6705.22	PASS	AB=0.533;AC=17;AF=0.304;AN=56;BaseQRankSum=6.344;DP=612;FS=7.462;HRun=0;HaplotypeScore=150.2337;InbreedingCoeff=0.8981;MQ=79.62;MQ0=0;MQRankSum=-8.718;QD=41.65;ReadPosRankSum=3.695;VQSLOD=5.0419;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,108,2602	0/0:2,0:2:6.02:0,6,164	0/0:23,0:23:66.11:0,66,1357	0/0:16,0:16:35.26:0,35,914	0/0:24,0:24:72.19:0,72,1833	1/1:0,18:18:51.17:964,51,0	1/1:0,17:17:21.07:405,21,0	0/0:32,0:32:90.30:0,90,2348	0/0:24,0:24:66.18:0,66,1576	0/0:25,0:25:66.21:0,66,1695	0/0:17,0:17:51.09:0,51,1328	1/1:0,24:24:66.18:1236,66,0	0/0:23,0:23:69.20:0,69,1828	0/0:19,0:19:51.15:0,51,1282	0/0:30,0:30:87.29:0,87,2324	0/1:3,21:24:27.97:932,0,28	1/1:2,21:23:48.16:927,48,0	1/1:0,10:10:24.08:464,24,0	0/0:19,0:19:45.14:0,45,1108	0/0:16,0:16:48.16:0,48,1275	0/0:41,0:41:99:0,120,3220	1/1:0,11:11:27.09:522,27,0	1/1:1,12:13:30.04:579,30,0	1/1:0,21:21:39.02:676,39,0	0/0:21,0:21:63.15:0,63,1494	0/0:31,0:31:87.25:0,87,2259	0/0:26,0:26:75.23:0,75,1932	0/0:25,0:25:75.26:0,75,2012
chr10	55943223	.	TCTTTCTTTCTTTCTTC	T	4022.39	PASS	AB=1.000;AC=45;AF=0.865;AN=52;BaseQRankSum=7.660;DP=369;FS=0.619;HRun=0;HaplotypeScore=179.9164;InbreedingCoeff=0.3900;MQ=49.46;MQ0=23;MQRankSum=-0.130;QD=11.97;ReadPosRankSum=-2.428;VQSLOD=2.3001;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:12,0:12:18.68:127,19,0	1/1:2,0:2:6:52,6,0	./.	./.	1/1:18,0:18:26.54:266,27,0	1/1:11,0:11:14.93:120,15,0	1/1:12,0:10:13.36:129,13,0	0/1:18,0:7:3.87:97,0,4	1/1:13,0:13:3.01:47,3,0	1/1:18,0:15:29.70:390,30,0	1/1:17,0:17:38.93:384,39,0	1/1:9,0:9:2.99:24,3,0	0/0:18,0:18:30.49:0,30,1084	0/0:14,0:14:39.01:0,39,900	0/1:10,0:10:36.77:37,0,72	1/1:11,0:11:20.78:151,21,0	1/1:18,0:18:23.84:181,24,0	1/1:17,0:15:5.09:166,5,0	1/1:17,0:12:16.65:262,17,0	1/1:6,15:20:12.72:284,13,0	1/1:5,0:5:11.96:123,12,0	1/1:8,0:8:17.90:146,18,0	1/1:12,0:12:16.91:141,17,0	1/1:14,0:14:8.26:97,8,0	1/1:24,0:24:23.68:188,24,0	0/1:17,0:16:85.99:110,0,86	1/1:19,0:19:29.98:307,30,0	1/1:13,0:10:23.94:194,24,0
chr10	55943227	.	TCTTTCTTTCTTC	T	4083.30	PASS	AB=1.000;AC=45;AF=0.865;AN=52;BaseQRankSum=7.485;DP=347;FS=2.145;HRun=0;HaplotypeScore=141.9266;InbreedingCoeff=0.4183;MQ=49.29;MQ0=23;MQRankSum=0.190;QD=13.00;ReadPosRankSum=-0.994;VQSLOD=2.6521;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:12,0:12:20.79:150,21,0	1/1:2,0:2:6:53,6,0	./.	./.	1/1:18,0:18:38.30:287,38,0	1/1:6,0:6:17.93:145,18,0	1/1:12,0:10:13.41:129,13,0	0/1:17,0:7:2.36:98,0,2	1/1:2,10:12:3.01:106,3,0	1/1:20,0:17:36.86:420,37,0	1/1:17,0:17:41.28:336,41,0	1/1:6,0:6:2.99:24,3,0	0/0:18,0:18:30.46:0,30,731	0/0:13,0:13:38.96:0,39,579	0/1:9,0:9:34.08:34,0,72	1/1:12,0:12:23.78:177,24,0	1/1:17,0:17:29.83:232,30,0	1/1:16,0:14:11.73:173,12,0	1/1:16,0:11:19.64:247,20,0	1/1:19,0:18:12.68:222,13,0	1/1:4,0:4:11.96:98,12,0	1/1:8,0:8:17.90:146,18,0	1/1:11,0:11:20.53:160,21,0	1/1:11,0:11:9.19:99,9,0	1/1:23,0:23:23.68:188,24,0	0/1:16,0:15:86.02:110,0,86	1/1:15,0:15:29.87:232,30,0	1/1:15,0:11:26.94:219,27,0
chr10	55943235	.	TCTTC	T	4443.76	PASS	AB=1.000;AC=45;AF=0.804;AN=56;BaseQRankSum=8.139;DP=312;FS=3.876;HRun=0;HaplotypeScore=74.0486;InbreedingCoeff=0.4932;MQ=52.29;MQ0=18;MQRankSum=0.742;QD=16.16;ReadPosRankSum=1.585;VQSLOD=3.8902;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:11:29.72:214,30,0	1/1:3,0:3:9:78,9,0	0/0:6,0:2:3.01:0,3,33	0/0:2,0:1:3.01:0,3,31	1/1:17,0:17:44.64:343,45,0	1/1:6,0:6:17.93:145,18,0	1/1:8,0:6:3.43:118,3,0	0/1:16,0:8:0.84:121,0,1	1/1:11,0:11:3.01:34,3,0	1/1:19,0:17:35.98:419,36,0	1/1:16,0:16:44.28:362,44,0	1/1:1,0:1:2.99:24,3,0	0/0:16,0:16:30.43:0,30,431	0/0:13,0:13:38.94:0,39,354	0/1:9,0:9:51.07:51,0,69	1/1:9,0:9:26.78:203,27,0	1/1:12,0:12:35.79:277,36,0	1/1:15,0:13:32.80:249,33,0	1/1:5,7:11:17:244,17,0	1/1:18,0:17:12.62:175,13,0	1/1:6,0:6:17.95:149,18,0	1/1:8,0:8:23.90:199,24,0	1/1:8,0:8:19.32:158,19,0	1/1:10,0:10:9.09:107,9,0	1/1:20,0:20:26.68:214,27,0	0/1:16,0:15:86.02:110,0,86	1/1:11,0:11:29.87:232,30,0	1/1:13,0:9:26.94:219,27,0
chr10	55943239	.	CCTTTCTTTCTTTCTTTCTTT	C	8526.52	PASS	AB=1.000;AC=47;AF=0.839;AN=56;BaseQRankSum=1.137;DP=298;FS=9.062;HRun=0;HaplotypeScore=146.4728;InbreedingCoeff=0.6751;MQ=53.89;MQ0=11;MQRankSum=-0.613;QD=33.05;ReadPosRankSum=1.323;VQSLOD=3.2419;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:12,0:12:17.12:460,17,0	1/1:4,0:4:12.04:258,12,0	0/0:6,0:2:5.69:0,6,81	0/0:2,0:1:3.01:0,3,59	1/1:16,0:16:42.14:653,42,0	1/1:6,0:6:18.06:295,18,0	1/1:10,0:8:21.07:369,21,0	1/1:8,0:7:18.06:287,18,0	1/1:10,0:10:2.04:6,2,0	1/1:19,0:18:10.04:602,10,0	0/1:15,0:15:22.77:438,0,23	1/1:1,0:1:3.01:49,3,0	0/0:17,0:17:46.38:0,46,1670	0/0:15,0:15:42.14:0,42,1498	1/1:9,0:9:18.05:296,18,0	1/1:9,0:9:27.09:402,27,0	1/1:12,0:12:36.12:553,36,0	1/1:15,0:13:28.12:461,28,0	1/1:13,0:12:14.95:299,15,0	1/1:17,0:16:20.35:355,20,0	1/1:7,0:7:17.39:222,17,0	1/1:8,0:8:24.08:393,24,0	1/1:9,0:9:24.06:376,24,0	1/1:10,0:10:17.52:230,18,0	1/1:10,0:10:30.10:463,30,0	1/1:5,10:14:27.03:341,27,0	1/1:10,0:10:9.05:258,9,0	1/1:13,0:9:27.09:462,27,0
chr10	55943358	.	A	ATT	6242.32	PASS	AB=0.703;AC=45;AF=0.804;AN=56;BaseQRankSum=0.687;DP=405;FS=3.265;HRun=11;HaplotypeScore=78.7757;InbreedingCoeff=0.4840;MQ=69.33;MQ0=0;MQRankSum=-2.615;QD=16.78;ReadPosRankSum=-0.656;VQSLOD=3.7458;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,0:17:32.94:288,33,0	1/1:2,4:7:11.53:139,12,0	0/0:8,0:8:15.83:0,16,104	0/1:8,0:8:7.03:7,0,49	1/1:5,1:14:35.90:327,36,0	0/1:15,0:27:16.94:128,0,17	0/1:4,1:15:0.63:92,0,1	0/1:5,8:12:2.13:271,0,2	1/1:4,9:13:7.06:415,7,0	1/1:3,6:10:26.57:340,27,0	1/1:5,7:14:37.98:411,38,0	1/1:5,1:11:23.96:142,24,0	0/0:13,0:14:29.95:0,30,332	0/0:11,0:11:20.90:0,21,191	1/1:7,0:10:19.86:149,20,0	1/1:7,0:21:42.67:150,43,0	0/1:5,0:14:16.11:21,0,16	1/1:3,0:11:17.47:60,17,0	1/1:13,4:18:33.02:369,33,0	1/1:7,6:14:32.57:405,33,0	1/1:1,3:5:11.48:115,11,0	1/1:3,1:16:22.97:112,23,0	1/1:6,1:22:7.33:129,7,0	1/1:0,0:17:27.43:94,27,0	1/1:5,9:15:44.57:543,45,0	1/1:7,12:21:18.97:532,19,0	1/1:11,14:26:56.56:676,57,0	1/1:3,10:12:24.04:324,24,0
chr10	55943407	.	GT	G	896.37	PASS	AB=0.872;AC=21;AF=0.375;AN=56;BaseQRankSum=0.924;DP=488;FS=1.654;HRun=16;HaplotypeScore=110.9218;InbreedingCoeff=0.3400;MQ=78.89;MQ0=3;MQRankSum=-1.032;QD=3.70;ReadPosRankSum=1.915;VQSLOD=1.2083;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,1:24:25.56:0,26,285	0/0:6,0:6:11.59:0,12,65	0/0:43,1:25:3.35:0,3,92	0/0:26,0:16:10.69:0,11,65	0/0:21,0:22:30.10:0,30,216	0/0:24,1:26:8.84:0,9,225	0/0:11,0:12:14.58:0,15,139	0/0:25,0:25:41.29:0,41,195	1/1:12,4:16:17.22:93,17,0	1/1:6,6:11:17.56:108,18,0	0/1:11,3:14:41:50,0,41	0/1:9,1:12:9.70:10,0,24	0/0:13,0:13:26.23:0,26,173	0/1:11,2:15:6.40:6,0,143	1/1:5,6:11:17.43:107,17,0	0/0:13,1:14:5.96:0,6,156	0/0:11,0:12:20.61:0,21,140	0/0:6,0:6:5.59:0,6,35	0/1:17,6:23:0.14:120,0,0	1/1:12,7:20:12.84:141,13,0	0/1:3,0:4:13.51:14,0,17	0/1:16,1:18:0.92:1,0,180	0/1:17,1:20:0.34:0,0,85	0/0:14,0:14:17.21:0,17,127	0/1:10,5:16:13.25:100,0,13	1/1:11,6:17:26.25:159,26,0	1/1:20,8:30:2.54:138,3,0	0/1:14,0:14:12.23:27,0,12
chr10	55943451	.	G	GAAA	10817.14	PASS	AB=1.000;AC=47;AF=0.839;AN=56;BaseQRankSum=-1.464;DP=463;FS=7.729;HRun=10;HaplotypeScore=103.7480;InbreedingCoeff=0.8971;MQ=72.01;MQ0=0;MQRankSum=-5.399;QD=28.17;ReadPosRankSum=-1.521;VQSLOD=3.2627;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:23,1:28:51.06:713,51,0	1/1:4,0:4:3.01:32,3,0	0/0:20,0:16:18.79:0,19,194	0/0:22,0:15:17.13:0,17,199	1/1:7,0:19:27:336,27,0	1/1:13,4:23:46.39:722,46,0	1/1:6,2:13:27.06:379,27,0	1/1:9,1:28:53.02:634,53,0	1/1:5,12:20:37.32:593,37,0	1/1:7,11:19:39.05:586,39,0	1/1:3,11:16:36.06:614,36,0	1/1:4,2:13:15.05:214,15,0	0/0:14,0:14:26.94:0,27,295	0/0:21,0:23:52.72:0,53,653	1/1:6,7:15:23.92:380,24,0	1/1:9,0:12:21.26:252,21,0	1/1:9,0:13:25.40:339,25,0	0/1:1,0:1:0:0,0,0	1/1:7,8:17:36.04:560,36,0	1/1:16,5:23:51.05:746,51,0	1/1:0,8:8:15.05:288,15,0	1/1:7,0:11:17.93:251,18,0	1/1:16,0:18:32.49:352,32,0	1/1:9,0:13:21.54:310,22,0	1/1:6,5:14:33.09:572,33,0	1/1:15,4:19:39.10:642,39,0	1/1:13,5:19:39.05:592,39,0	1/1:5,7:17:48.06:710,48,0
chr10	55944261	.	T	TA	5618.56	PASS	AB=0.806;AC=44;AF=0.786;AN=56;BaseQRankSum=-0.419;DP=532;FS=3.989;HRun=13;HaplotypeScore=76.0070;InbreedingCoeff=0.5906;MQ=68.56;MQ0=2;MQRankSum=-1.270;QD=12.03;ReadPosRankSum=0.492;VQSLOD=4.8830;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,14:23:42.77:379,43,0	0/0:9,0:9:26.77:0,27,185	0/1:16,0:16:5.63:6,0,46	0/1:9,0:9:15.72:31,0,16	1/1:9,22:33:44.26:527,44,0	1/1:1,0:19:22.73:115,23,0	1/1:4,1:9:14.14:75,14,0	0/0:27,0:29:58.44:0,58,395	1/1:5,12:17:12.45:258,12,0	1/1:4,21:25:36.41:461,36,0	1/1:7,21:29:60.74:537,61,0	1/1:2,0:9:22.73:115,23,0	0/0:12,0:13:22.81:0,23,148	0/0:14,0:14:23.65:0,24,164	1/1:5,14:19:36.04:334,36,0	1/1:4,0:11:5.68:29,6,0	1/1:2,0:21:39.57:197,40,0	1/1:8,1:21:28.69:152,29,0	1/1:4,9:13:12.46:258,12,0	1/1:4,20:25:59.66:499,60,0	0/1:7,7:15:2.09:122,0,2	1/1:7,0:20:37.69:213,38,0	1/1:9,1:21:19.01:104,19,0	1/1:1,0:15:22.73:115,23,0	1/1:2,15:20:20.96:294,21,0	1/1:12,13:26:6.56:322,7,0	1/1:10,17:27:18.46:310,18,0	0/1:5,15:20:14.14:168,0,14
chr10	55944529	.	CT	C	10088.30	PASS	AB=1.000;AC=49;AF=0.875;AN=56;BaseQRankSum=-0.559;DP=583;FS=9.774;HRun=10;HaplotypeScore=67.3848;InbreedingCoeff=0.8351;MQ=64.13;MQ0=1;MQRankSum=-2.477;QD=18.89;ReadPosRankSum=3.133;VQSLOD=5.4616;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,43:46:99:911,105,0	1/1:2,5:7:14.98:130,15,0	0/1:11,0:10:14.89:15,0,145	0/0:18,0:16:31.24:0,31,252	1/1:4,26:30:74.98:651,75,0	1/1:4,19:23:53.98:469,54,0	1/1:3,17:20:38.99:337,39,0	1/1:5,24:28:71.94:619,72,0	1/1:1,15:16:38.99:339,39,0	1/1:3,17:20:53.02:449,53,0	1/1:3,15:18:41.97:360,42,0	1/1:7,5:13:24.53:212,25,0	0/0:8,0:8:24.06:0,24,265	0/0:22,1:22:31.22:0,31,562	1/1:2,24:26:59.80:520,60,0	1/1:2,12:14:29.99:260,30,0	1/1:3,23:26:59.98:521,60,0	1/1:0,20:20:41.99:364,42,0	1/1:24,13:37:79.98:676,80,0	1/1:1,27:28:80.35:683,80,0	1/1:2,20:22:41.99:365,42,0	1/1:3,12:15:35.98:312,36,0	1/1:2,14:15:38.99:339,39,0	1/1:2,21:23:44.98:389,45,0	1/1:1,19:20:32.99:286,33,0	1/1:11,10:19:44.97:388,45,0	1/1:2,15:17:35.96:312,36,0	1/1:1,14:15:20.99:182,21,0
chr10	55944630	.	A	ACTT	28603.08	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=8.537;DP=563;FS=1.015;HRun=0;HaplotypeScore=147.8745;InbreedingCoeff=0.9921;MQ=75.43;MQ0=0;MQRankSum=-8.494;QD=57.90;ReadPosRankSum=3.473;VQSLOD=6.5056;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,37:42:99:2421,111,0	1/1:0,7:7:18.06:383,18,0	0/0:25,0:25:69.16:0,69,1043	0/0:15,0:15:45.15:0,45,715	1/1:1,28:29:78.27:1688,78,0	1/1:2,14:16:48.16:1061,48,0	1/1:2,21:25:60.21:1345,60,0	1/1:3,10:14:39.13:858,39,0	1/1:3,18:22:60.21:1321,60,0	1/1:1,22:27:78.14:1606,78,0	1/1:1,21:22:57.19:1253,57,0	1/1:3,14:17:42.11:903,42,0	0/0:9,0:9:21.07:0,21,349	0/0:20,0:20:60.19:0,60,973	1/1:3,19:25:54.19:1210,54,0	1/1:3,19:23:63.22:1370,63,0	1/1:1,21:22:63.22:1426,63,0	1/1:2,11:12:36.12:812,36,0	1/1:4,14:18:51.18:1142,51,0	1/1:3,13:16:45.15:985,45,0	1/1:2,17:18:45.15:1018,45,0	1/1:0,15:15:42.01:949,42,0	1/1:0,15:17:42.14:936,42,0	1/1:5,15:21:42.14:899,42,0	1/1:1,5:7:15.05:339,15,0	1/1:4,29:32:96.33:2125,96,0	1/1:7,19:28:69.24:1534,69,0	1/1:1,15:16:45.15:1019,45,0
chr10	55944683	.	G	GTCTATCTA	2081.83	PASS	AB=1.000;AC=34;AF=0.708;AN=48;BaseQRankSum=6.017;DP=631;FS=13.562;HRun=0;HaplotypeScore=245.6429;InbreedingCoeff=0.5465;MQ=56.64;MQ0=9;MQRankSum=-0.400;QD=4.91;ReadPosRankSum=-0.837;VQSLOD=0.8458;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:15:0,15,325	./.	./.	./.	1/1:26,0:25:9.91:72,10,0	0/0:17,0:17:11.86:0,12,161	0/0:31,0:31:6:0,6,54	./.	0/1:23,0:23:44.10:117,0,44	1/1:24,0:24:15.28:75,15,0	0/1:24,0:24:9.62:45,0,10	1/1:22,0:22:10.68:69,11,0	1/1:13,0:13:18.06:369,18,0	1/1:17,7:24:3.01:98,3,0	1/1:30,0:30:31.90:240,32,0	0/0:23,0:23:24.07:0,24,457	1/1:25,0:25:27.12:183,27,0	0/1:12,0:12:14.69:163,0,15	1/1:21,0:19:18.93:163,19,0	1/1:24,0:24:22.68:135,23,0	1/1:31,0:30:20.69:103,21,0	0/0:18,0:18:11.97:0,12,117	0/1:19,0:18:0:0,0,0	1/1:12,0:11:5.74:36,6,0	1/1:21,0:19:15.71:90,16,0	1/1:31,0:28:8.53:94,9,0	1/1:25,0:24:13.68:116,14,0	1/1:15,0:15:13.57:77,14,0
chr10	55944702	.	T	TATCC	9105.31	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=2.927;DP=632;FS=6.911;HRun=0;HaplotypeScore=162.3512;InbreedingCoeff=0.4733;MQ=50.62;MQ0=11;MQRankSum=1.707;QD=22.15;ReadPosRankSum=2.841;VQSLOD=4.0395;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:50.88:0,51,664	0/0:3,0:3:5.97:0,6,46	0/1:10,0:1:0:0,0,0	0/0:12,0:5:11.98:0,12,110	0/1:21,0:20:86.49:86,0,118	0/0:21,0:21:42:0,42,450	0/0:25,0:25:56.39:0,56,509	0/0:35,0:28:74.69:0,75,596	1/1:22,3:26:44.73:791,45,0	1/1:21,5:26:73.98:938,74,0	1/1:24,2:26:50.23:540,50,0	0/1:26,0:26:55.94:105,0,56	0/1:16,0:16:22.84:23,0,209	0/0:30,0:28:6:0,6,363	1/1:22,9:31:75.02:1172,75,0	0/0:23,0:23:51.02:0,51,662	0/1:27,0:27:99:212,0,242	0/1:13,0:13:99:157,0,105	1/1:17,3:17:2.06:616,2,0	1/1:21,3:24:51.46:829,51,0	1/1:28,5:32:86.89:1096,87,0	0/0:17,0:17:35.99:0,36,382	0/0:22,0:20:5.95:0,6,44	0/1:16,0:14:15.41:15,0,76	1/1:19,4:21:27.88:605,28,0	1/1:31,2:30:47.73:769,48,0	1/1:22,4:25:56.67:683,57,0	1/1:14,0:14:32.96:468,33,0
chr10	55944734	.	T	TATCC	13365.13	PASS	AB=0.943;AC=42;AF=0.750;AN=56;BaseQRankSum=-4.213;DP=658;FS=26.704;HRun=0;HaplotypeScore=137.0337;InbreedingCoeff=0.1970;MQ=51.54;MQ0=11;MQRankSum=1.370;QD=22.61;ReadPosRankSum=1.537;VQSLOD=2.8421;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:40,0:40:93.18:471,0,93	0/1:2,0:2:13.48:19,0,13	0/0:16,0:4:8.81:0,9,77	0/0:21,0:7:11.40:0,11,129	1/1:17,3:19:44.79:519,45,0	0/1:18,0:18:66.21:167,0,66	0/1:29,0:29:43.25:326,0,43	1/1:25,0:22:43.90:378,44,0	1/1:26,0:26:42.11:773,42,0	1/1:20,0:20:56.57:777,57,0	1/1:31,0:30:37.19:581,37,0	1/1:2,28:30:12.04:320,12,0	0/1:15,0:15:28.79:29,0,170	0/0:30,0:29:0.21:0,0,300	1/1:37,0:37:87.01:1274,87,0	0/1:20,0:20:99:126,0,124	1/1:22,5:27:71.24:1097,71,0	1/1:11,3:14:20.72:630,21,0	1/1:21,0:19:57.03:792,57,0	1/1:27,0:27:65.76:932,66,0	1/1:39,0:39:98.40:1202,98,0	0/1:17,0:17:72.06:139,0,72	0/1:4,0:24:0.44:0,0,0	1/1:6,10:15:5.43:100,5,0	1/1:23,0:22:50.88:675,51,0	1/1:30,0:29:73.01:832,73,0	1/1:23,0:22:50.71:632,51,0	1/1:15,0:15:44.99:573,45,0
chr10	55945596	.	GGA	G	301.81	PASS	AB=0.708;AC=37;AF=0.771;AN=48;BaseQRankSum=1.172;DP=186;FS=24.571;HRun=0;HaplotypeScore=66.3104;InbreedingCoeff=0.1600;MQ=75.98;MQ0=16;MQRankSum=-1.715;QD=2.05;ReadPosRankSum=1.027;VQSLOD=-0.0010;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:1,5:5:2.13:7,2,0	1/1:0,7:7:10.61:36,11,0	0/0:21,0:6:3.01:0,3,51	0/1:29,0:15:25.58:30,0,26	./.	1/1:1,6:4:1.02:3,1,0	1/1:3,5:7:2.74:20,3,0	1/1:0,1:1:2.22:7,2,0	1/1:2,4:3:1.83:4,2,0	1/1:1,7:8:14.58:48,15,0	1/1:2,5:5:2.58:12,3,0	1/1:0,2:2:3.07:11,3,0	./.	0/0:3,1:3:1.64:0,2,41	1/1:0,5:5:5.75:24,6,0	1/1:2,6:7:8.74:36,9,0	0/1:8,3:10:1.24:1,0,10	1/1:4,3:4:9.07:65,9,0	1/1:2,3:2:4.07:12,4,0	./.	1/1:6,3:6:4.19:23,4,0	0/1:1,3:4:1.47:2,0,1	0/0:0,2:2:0:0,0,0	./.	0/1:1,5:6:6.52:12,0,7	1/1:1,1:2:5.52:26,6,0	0/1:3,4:7:24.20:34,0,24	1/1:1,1:2:1.25:3,1,0
chr10	55945599	.	G	GGC	1275.33	PASS	AB=0.979;AC=39;AF=0.780;AN=50;BaseQRankSum=3.332;DP=211;FS=6.248;HRun=0;HaplotypeScore=76.9839;InbreedingCoeff=0.0674;MQ=67.80;MQ0=20;MQRankSum=-0.576;QD=7.21;ReadPosRankSum=2.318;VQSLOD=2.6266;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:6,0:5:0.17:7,0,0	1/1:7,0:7:19.65:131,20,0	0/0:19,0:5:3.01:0,3,49	0/1:26,0:13:29.66:83,0,30	./.	1/1:6,1:4:11.47:67,11,0	1/1:9,1:9:13.24:80,13,0	1/1:2,0:2:6:65,6,0	1/1:6,0:3:8.89:59,9,0	1/1:9,0:9:23.67:165,24,0	1/1:7,0:5:2.97:10,3,0	1/1:4,0:4:4.92:42,5,0	./.	0/1:6,0:5:5.24:5,0,85	1/1:8,0:7:17.69:139,18,0	1/1:6,2:7:20.80:147,21,0	0/1:12,0:11:5.80:6,0,78	0/1:7,1:4:14.81:79,0,15	1/1:5,0:2:5.93:40,6,0	0/0:2,0:2:1.55:0,2,4	1/1:13,0:10:13.22:75,13,0	1/1:10,1:9:2.22:12,2,0	1/1:3,0:3:0.47:1,0,0	./.	1/1:6,1:7:4.01:85,4,0	0/1:2,0:2:7.10:28,0,7	0/1:7,0:7:40.06:55,0,40	1/1:2,0:2:2.97:20,3,0
chr10	55945605	.	G	GGC	1310.73	PASS	AB=0.779;AC=40;AF=0.769;AN=52;BaseQRankSum=3.078;DP=220;FS=10.626;HRun=0;HaplotypeScore=72.7922;InbreedingCoeff=0.0550;MQ=59.67;MQ0=25;MQRankSum=-0.849;QD=6.94;ReadPosRankSum=3.496;VQSLOD=2.0341;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:4,5:6:4.29:12,0,4	1/1:0,7:7:20.70:151,21,0	0/0:16,0:3:4.26:0,4,42	0/1:21,0:11:7.82:8,0,41	./.	1/1:1,6:4:11.73:72,12,0	1/1:8,6:12:11.56:74,12,0	1/1:0,2:2:6.02:88,6,0	1/1:3,4:4:8.88:59,9,0	1/1:1,8:9:23.08:187,23,0	1/1:2,5:5:2.97:10,3,0	1/1:2,2:4:1.14:38,1,0	0/0:3,0:2:3.01:0,3,44	0/1:6,1:6:5.18:5,0,135	1/1:1,7:7:14.31:148,14,0	1/1:2,6:7:20.85:161,21,0	0/1:9,3:11:10.94:11,0,121	0/1:6,3:4:19.28:91,0,19	1/1:2,3:2:5.99:52,6,0	1/1:1,2:2:0.47:1,0,0	1/1:7,4:10:5.51:63,6,0	0/1:8,4:10:7.50:7,0,21	1/1:2,3:5:0.39:1,0,0	./.	1/1:2,6:8:13.90:86,14,0	0/1:2,1:3:27.13:27,0,27	0/1:4,4:7:47.77:73,0,48	1/1:1,1:2:2.99:23,3,0
chr10	55945609	.	G	GC	397.94	PASS	AB=0.763;AC=37;AF=0.685;AN=54;BaseQRankSum=3.950;DP=232;FS=17.271;HRun=0;HaplotypeScore=75.5426;InbreedingCoeff=0.1929;MQ=50.85;MQ0=32;MQRankSum=-1.049;QD=2.30;ReadPosRankSum=3.942;VQSLOD=0.7804;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:4,5:6:5.02:5,0,15	1/1:0,7:7:15.65:52,16,0	0/0:14,0:2:4.83:0,5,45	0/1:17,0:8:15.56:25,0,16	./.	1/1:1,6:4:5.49:20,5,0	1/1:9,6:12:6.95:24,7,0	1/1:0,2:2:5.93:47,6,0	1/1:4,4:4:6.81:22,7,0	1/1:1,8:9:13.96:75,14,0	1/1:2,5:5:0.87:2,1,0	1/1:3,2:5:1.06:6,1,0	0/0:5,0:3:6:0,6,66	0/1:7,1:6:0.09:0,0,114	1/1:1,7:7:12.17:53,12,0	1/1:4,6:8:16.06:54,16,0	0/0:10,3:12:0.98:0,1,116	0/1:7,3:4:22.55:43,0,23	1/1:2,3:2:5.65:28,6,0	1/1:3,2:4:1.82:5,2,0	1/1:10,4:10:0.32:7,0,0	0/0:9,4:11:5.13:0,5,50	0/1:2,3:5:0.07:0,0,0	0/0:8,1:6:0:0,0,0	1/1:2,6:8:1.62:4,2,0	0/1:2,1:3:18.83:19,0,57	0/1:4,4:7:33.49:33,0,48	1/1:2,1:2:2.68:11,3,0
chr10	55945688	.	AAG	A	4992.10	PASS	AB=1.000;AC=47;AF=0.839;AN=56;BaseQRankSum=2.855;DP=535;FS=0.612;HRun=0;HaplotypeScore=100.9341;InbreedingCoeff=0.7837;MQ=54.29;MQ0=23;MQRankSum=-1.025;QD=13.17;ReadPosRankSum=2.878;VQSLOD=4.8525;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:12,0:10:15.86:44,16,0	1/1:1,0:1:2.90:16,3,0	0/0:58,0:14:16.43:0,16,376	0/0:75,0:22:31.46:0,31,529	1/1:14,0:14:22.19:60,22,0	1/1:3,9:11:15.05:201,15,0	1/1:1,21:22:42.10:565,42,0	1/1:4,14:16:36.15:489,36,0	1/1:10,0:10:18.16:85,18,0	1/1:16,0:16:19.61:62,20,0	1/1:19,0:19:31.01:128,31,0	1/1:2,13:15:24.08:330,24,0	0/0:5,0:5:15.05:0,15,249	0/0:16,0:15:18.80:0,19,498	1/1:24,0:22:32.88:91,33,0	1/1:3,11:13:25.33:339,25,0	1/1:4,20:23:51.01:696,51,0	1/1:1,9:7:12.04:168,12,0	1/1:14,0:13:24.29:82,24,0	1/1:13,0:13:17.89:50,18,0	1/1:28,0:26:38.50:106,38,0	1/1:3,21:23:39.09:523,39,0	1/1:2,18:20:42.14:587,42,0	1/1:2,11:12:17.95:187,18,0	1/1:11,0:11:18.61:53,19,0	1/1:20,0:20:16.08:67,16,0	0/1:15,0:15:18.77:33,0,19	1/1:10,0:10:9.07:32,9,0
chr10	55945692	.	GA	G	7806.01	PASS	AB=1.000;AC=43;AF=0.768;AN=56;BaseQRankSum=1.480;DP=523;FS=0.543;HRun=1;HaplotypeScore=84.0899;InbreedingCoeff=0.6391;MQ=55.61;MQ0=21;MQRankSum=-2.105;QD=20.38;ReadPosRankSum=5.159;VQSLOD=5.0829;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,10:11:27.52:354,28,0	0/0:1,0:1:2.68:0,3,11	0/0:52,0:16:36.52:0,37,452	0/0:64,0:22:19.11:0,19,505	1/1:0,14:14:36.12:495,36,0	0/1:15,0:14:6.61:41,0,7	1/1:22,0:22:29.78:159,30,0	0/1:18,0:16:16.10:109,0,16	1/1:0,11:11:23.95:265,24,0	1/1:1,15:16:40.40:604,40,0	1/1:4,14:18:44.89:562,45,0	1/1:15,0:15:21.81:98,22,0	0/0:5,0:5:15.05:0,15,205	0/0:16,0:15:18.79:0,19,421	1/1:1,24:24:54.18:740,54,0	1/1:14,0:13:3.12:84,3,0	1/1:22,1:23:33.32:192,33,0	1/1:9,0:7:11.19:52,11,0	1/1:1,14:14:36.09:481,36,0	1/1:0,13:13:27.56:377,28,0	1/1:4,25:27:63.19:865,63,0	1/1:23,0:22:27:146,27,0	1/1:18,0:18:39.17:182,39,0	0/1:14,0:13:8.58:80,0,9	1/1:0,12:12:30.10:415,30,0	1/1:1,19:20:54.48:704,54,0	1/1:3,12:15:12.80:481,13,0	1/1:0,11:11:24.07:319,24,0
chr10	55946203	.	A	AGTGT	5068.83	PASS	AB=1.000;AC=47;AF=0.839;AN=56;BaseQRankSum=0.249;DP=543;FS=2.547;HRun=0;HaplotypeScore=160.2409;InbreedingCoeff=0.5190;MQ=64.39;MQ0=4;MQRankSum=-1.570;QD=11.24;ReadPosRankSum=0.168;VQSLOD=4.6678;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:32,0:31:2.93:23,3,0	1/1:7,0:7:8.97:80,9,0	0/0:37,0:21:2.98:0,3,22	0/0:34,0:18:2.99:0,3,24	0/1:14,0:14:9.80:27,0,10	1/1:23,0:23:13.81:82,14,0	1/1:29,0:29:10.59:150,11,0	1/1:22,0:21:32.87:346,33,0	1/1:30,1:31:27.09:546,27,0	1/1:10,1:12:26.47:353,26,0	1/1:9,0:11:14.52:184,15,0	1/1:22,0:22:12.71:259,13,0	0/0:12,0:12:18.06:0,18,281	0/0:9,0:9:5.97:0,6,75	1/1:6,8:14:12.03:209,12,0	1/1:13,0:14:23.06:240,23,0	1/1:44,0:45:32.95:439,33,0	1/1:20,0:21:29.95:372,30,0	1/1:12,0:10:8.73:105,9,0	1/1:16,1:17:17.95:381,18,0	1/1:28,2:30:14.62:295,15,0	1/1:9,0:10:5.31:57,5,0	1/1:6,0:6:2.88:42,3,0	1/1:23,0:23:2.72:34,3,0	1/1:10,0:10:11.49:156,11,0	1/1:15,1:17:27.05:380,27,0	1/1:17,0:17:12.04:251,12,0	1/1:4,5:8:3.48:60,3,0
chr10	55946242	.	G	GTT	2336.22	PASS	AB=0.973;AC=31;AF=0.554;AN=56;BaseQRankSum=6.659;DP=369;FS=2.879;HRun=0;HaplotypeScore=129.8722;InbreedingCoeff=-0.1401;MQ=46.73;MQ0=8;MQRankSum=-5.811;QD=7.10;ReadPosRankSum=-5.155;VQSLOD=2.2374;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:25:1.45:190,0,1	1/1:3,1:4:6.46:62,6,0	0/1:10,0:4:1.83:2,0,10	0/0:13,0:3:1.63:0,2,4	1/1:6,0:11:9.64:138,10,0	1/1:7,5:12:27.03:348,27,0	1/1:19,3:22:10.26:246,10,0	0/1:19,0:16:53.16:53,0,146	0/1:17,0:17:20.76:57,0,21	0/1:10,0:10:20.35:20,0,69	0/1:9,0:9:42.62:85,0,43	0/1:10,5:15:23.18:168,0,23	0/0:10,0:10:17.65:0,18,270	0/0:5,0:5:15.05:0,15,233	0/1:15,0:13:37.16:49,0,37	0/1:12,0:11:38.57:63,0,39	0/1:21,1:26:32.75:159,0,33	1/1:10,0:12:5.45:136,5,0	0/0:5,0:4:8.76:0,9,94	0/1:14,0:14:53.11:175,0,53	0/1:20,0:19:25.90:37,0,26	1/1:7,1:8:13.20:121,13,0	1/1:10,1:11:20.91:199,21,0	1/1:18,1:18:4.38:23,4,0	0/1:13,0:13:58.79:59,0,78	0/1:17,0:17:40.76:41,0,105	0/1:7,0:7:70.50:74,0,70	0/0:7,0:6:5.76:0,6,33
chr10	55946391	.	CAA	C	5113.63	PASS	AB=0.944;AC=36;AF=0.643;AN=56;BaseQRankSum=3.406;DP=404;FS=8.934;HRun=12;HaplotypeScore=68.8982;InbreedingCoeff=0.6440;MQ=55.66;MQ0=12;MQRankSum=1.423;QD=16.55;ReadPosRankSum=5.399;VQSLOD=3.1213;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,13:20:27.85:429,28,0	1/1:2,3:5:15.03:148,15,0	0/0:6,0:2:2.80:0,3,15	0/1:7,0:5:12.10:12,0,26	1/1:10,6:17:33.16:328,33,0	0/0:10,0:9:1.02:0,1,3	0/0:19,0:19:2.73:0,3,37	1/1:12,11:18:13.32:275,13,0	1/1:8,12:20:41.86:398,42,0	1/1:7,16:23:56.64:520,57,0	1/1:5,10:14:23.66:290,24,0	1/1:9,0:8:1.30:3,1,0	0/0:6,0:4:9.03:0,9,132	0/0:9,0:9:14.72:0,15,230	1/1:2,9:11:30.06:301,30,0	0/0:9,0:7:5.95:0,6,43	0/1:17,0:16:2.27:2,0,15	0/0:9,0:9:1.38:0,1,19	1/1:8,10:20:21.56:314,22,0	1/1:5,8:13:27.01:269,27,0	1/1:8,9:14:18:178,18,0	0/0:14,0:13:13.31:0,13,77	1/1:7,0:6:1.22:3,1,0	0/0:13,0:12:2.80:0,3,46	1/1:6,8:15:29:274,29,0	1/1:10,11:17:45.08:451,45,0	1/1:18,13:30:66.03:641,66,0	1/1:5,9:14:29.09:275,29,0
chr10	55946401	.	AAAG	A	7330.40	PASS	AB=1.000;AC=50;AF=0.893;AN=56;BaseQRankSum=-0.829;DP=500;FS=0.000;HRun=0;HaplotypeScore=91.6201;InbreedingCoeff=0.6339;MQ=61.49;MQ0=11;MQRankSum=-1.489;QD=15.37;ReadPosRankSum=2.907;VQSLOD=4.4248;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:23:39.23:419,39,0	1/1:8,0:8:16.20:144,16,0	0/1:17,0:9:3.54:4,0,33	0/0:16,0:10:7.37:0,7,61	1/1:18,0:18:21.48:288,21,0	1/1:10,1:11:28.06:218,28,0	1/1:25,2:27:74.96:567,75,0	1/1:29,0:25:38.14:309,38,0	1/1:19,1:20:42.10:376,42,0	1/1:28,1:28:58.18:586,58,0	1/1:18,0:17:26.34:302,26,0	1/1:8,0:7:17.87:134,18,0	0/0:7,0:5:11.95:0,12,148	0/1:10,0:10:5.87:6,0,302	1/1:13,0:13:31.10:299,31,0	1/1:9,0:7:10.70:95,11,0	1/1:23,0:22:48.74:386,49,0	1/1:16,0:14:30.05:215,30,0	1/1:24,0:24:44.24:336,44,0	1/1:15,0:15:23:270,23,0	1/1:16,0:15:26.19:234,26,0	1/1:12,0:11:23.09:150,23,0	1/1:0,7:6:5.98:64,6,0	1/1:23,1:23:44.70:425,45,0	1/1:21,0:21:16.82:210,17,0	1/1:30,0:26:50.92:431,51,0	1/1:29,0:29:61.15:551,61,0	1/1:10,6:16:8.98:310,9,0
chr10	55946404	.	GA	G	5170.35	PASS	AB=0.900;AC=37;AF=0.661;AN=56;BaseQRankSum=0.064;DP=516;FS=0.623;HRun=12;HaplotypeScore=86.1709;InbreedingCoeff=0.6272;MQ=62.37;MQ0=11;MQRankSum=0.406;QD=12.67;ReadPosRankSum=4.697;VQSLOD=5.0302;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,18:23:39.18:330,39,0	1/1:5,3:8:20.93:168,21,0	0/1:17,1:10:2.33:2,0,73	0/0:17,1:11:15.21:0,15,91	1/1:11,8:19:24.89:270,25,0	0/0:12,0:12:1.10:0,1,3	0/0:31,0:31:5.29:0,5,48	1/1:7,22:25:62.82:504,63,0	1/1:4,16:21:40.49:297,40,0	1/1:3,26:28:77.45:616,77,0	1/1:4,14:17:13.69:285,14,0	0/1:8,0:7:0.05:0,0,0	0/0:9,0:7:17.99:0,18,171	0/0:11,0:11:26.55:0,27,289	1/1:5,9:14:38.91:315,39,0	0/1:9,0:7:0.13:0,0,0	0/1:24,0:23:1.24:1,0,4	0/0:16,0:14:5.34:0,5,32	1/1:4,21:25:65.84:534,66,0	1/1:4,12:16:32.88:264,33,0	1/1:12,5:15:32.93:270,33,0	0/0:11,0:10:5.14:0,5,23	1/1:7,0:6:2.03:5,2,0	1/1:24,0:23:3.11:10,3,0	0/1:4,17:21:3.12:160,0,3	1/1:7,24:27:68.85:557,69,0	1/1:10,19:28:25.86:392,26,0	1/1:7,9:16:0.06:189,0,0
chr10	55946715	.	G	GGGA	5555.70	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=-9.866;DP=655;FS=4.624;HRun=0;HaplotypeScore=101.7880;InbreedingCoeff=0.8799;MQ=69.83;MQ0=4;MQRankSum=1.329;QD=21.29;ReadPosRankSum=2.961;VQSLOD=4.7072;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:64.67:0,65,1058	1/1:3,1:4:3.01:61,3,0	0/1:44,0:25:15.73:16,0,446	0/0:52,0:38:11.86:0,12,216	0/0:28,0:28:39:0,39,538	1/1:4,10:14:24.08:491,24,0	1/1:6,19:26:33.11:676,33,0	1/1:15,12:28:30.08:451,30,0	0/0:20,0:20:48.16:0,48,676	0/0:25,0:25:39.12:0,39,524	0/0:12,0:12:24.08:0,24,340	1/1:4,14:19:38.96:751,39,0	0/0:21,0:21:51.17:0,51,731	0/0:20,0:20:51.16:0,51,703	0/0:27,0:27:63.20:0,63,884	1/1:5,11:16:18.06:320,18,0	1/1:8,23:32:51.18:1037,51,0	1/1:2,5:7:6.02:123,6,0	0/0:19,0:19:33.11:0,33,464	0/0:20,0:20:33.10:0,33,453	0/0:44,0:44:90.27:0,90,1249	1/1:10,14:24:27.09:525,27,0	1/1:2,11:11:17.88:368,18,0	1/1:4,26:30:36.12:737,36,0	0/0:13,0:13:33.07:0,33,447	0/0:24,0:24:54.16:0,54,731	0/0:15,0:14:26.93:0,27,387	0/0:13,0:13:36.09:0,36,485
chr10	55946986	.	GGTTTTT	G	9793.58	PASS	AB=1.000;AC=37;AF=0.661;AN=56;BaseQRankSum=11.520;DP=584;FS=7.390;HRun=0;HaplotypeScore=157.4616;InbreedingCoeff=0.0320;MQ=54.35;MQ0=15;MQRankSum=-9.477;QD=20.97;ReadPosRankSum=8.693;VQSLOD=2.9630;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:24:37.26:316,0,37	1/1:2,6:7:15.02:355,15,0	0/0:40,0:16:31.28:0,31,416	0/0:38,0:10:27:0,27,334	1/1:31,0:31:15.59:693,16,0	1/1:28,0:27:36.22:739,36,0	0/1:23,0:23:15.83:317,0,16	1/1:3,19:22:8.23:858,8,0	1/1:12,0:12:9.13:355,9,0	0/1:20,0:20:6.79:395,0,7	0/1:21,0:21:26.75:466,0,27	1/1:16,0:16:0.13:273,0,0	0/0:17,0:17:44.41:0,44,1067	0/0:22,0:22:63.17:0,63,1676	1/1:15,0:15:3.07:274,3,0	1/1:10,0:10:2.11:264,2,0	1/1:17,0:17:16.09:381,16,0	0/1:18,0:18:70.87:246,0,71	0/1:26,0:26:32.28:421,0,32	1/1:23,0:23:33.66:660,34,0	0/1:15,0:13:29.88:131,0,30	0/1:17,0:17:65.48:260,0,65	0/1:17,0:16:19.87:331,0,20	0/1:26,0:26:98.71:294,0,99	0/1:14,0:14:23.82:275,0,24	1/1:28,0:27:16.67:625,17,0	1/1:31,0:31:5.65:723,6,0	1/1:5,0:5:12.04:144,12,0
chr10	55946987	.	GTTTTTT	G	15252.45	PASS	AB=0.976;AC=48;AF=0.857;AN=56;BaseQRankSum=4.907;DP=583;FS=4.300;HRun=15;HaplotypeScore=141.2525;InbreedingCoeff=0.7177;MQ=54.84;MQ0=16;MQRankSum=-6.570;QD=30.32;ReadPosRankSum=4.126;VQSLOD=3.1329;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,19:24:24.30:540,24,0	1/1:7,0:7:15.01:260,15,0	0/0:41,0:17:8.93:0,9,215	0/1:37,0:11:6.87:7,0,214	1/1:2,29:31:74.73:1181,75,0	1/1:4,24:27:60.16:1111,60,0	1/1:2,20:23:30.10:536,30,0	0/1:23,0:22:6.72:466,0,7	1/1:1,11:12:30.08:556,30,0	1/1:3,17:20:48.09:751,48,0	1/1:2,18:20:42.07:773,42,0	1/1:1,15:16:24.06:445,24,0	0/0:16,0:17:37.93:0,38,880	0/0:22,0:22:63.14:0,63,1371	1/1:1,14:15:24.03:445,24,0	1/1:1,9:10:24.06:445,24,0	1/1:1,16:17:33.08:605,33,0	1/1:5,13:18:23.94:440,24,0	1/1:7,19:26:60.02:904,60,0	1/1:0,21:22:63.06:1040,63,0	1/1:5,10:13:12.03:222,12,0	1/1:3,12:16:27.59:472,28,0	1/1:2,15:16:30.05:556,30,0	1/1:6,19:25:24.27:495,24,0	1/1:3,11:14:24.02:445,24,0	1/1:4,24:27:72.18:1176,72,0	1/1:5,26:31:61.61:1160,62,0	1/1:0,5:5:12.04:222,12,0
chr10	55949496	.	C	CT	5304.44	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-13.664;DP=619;FS=4.840;HRun=8;HaplotypeScore=62.5071;InbreedingCoeff=0.9963;MQ=67.97;MQ0=4;MQRankSum=-0.666;QD=26.93;ReadPosRankSum=1.763;VQSLOD=5.7419;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,102,933	0/0:7,0:7:21.01:0,21,192	0/0:42,0:29:47.59:0,48,395	0/0:27,0:16:21:0,21,167	0/0:19,0:19:57.02:0,57,516	1/1:3,26:29:69.20:794,69,0	1/1:5,13:18:28.10:343,28,0	0/0:26,0:26:59.95:0,60,532	0/0:21,0:21:63.03:0,63,576	0/0:26,1:27:31.40:0,31,540	0/0:8,0:8:21.01:0,21,192	1/1:5,24:29:66.20:762,66,0	0/0:19,0:19:51.02:0,51,467	0/0:24,0:24:63.01:0,63,572	0/0:22,0:22:53.99:0,54,484	1/1:3,16:19:17.67:457,18,0	1/1:3,22:25:63.19:727,63,0	1/1:2,17:19:45.13:520,45,0	0/0:23,0:23:56.95:0,57,509	0/0:27,0:27:63.02:0,63,576	0/0:10,0:10:30.02:0,30,274	1/1:1,10:11:33.10:378,33,0	1/1:2,14:16:39.12:450,39,0	1/1:3,28:31:53.78:873,54,0	0/0:26,0:26:72.02:0,72,655	0/0:17,0:17:48.03:0,48,439	0/0:26,0:26:69.03:0,69,631	0/0:13,0:13:33.02:0,33,301
chr10	55949783	.	TTGTGTGTGTGTG	T	7213.74	PASS	AB=0.657;AC=24;AF=0.462;AN=52;BaseQRankSum=8.072;DP=563;FS=4.022;HRun=0;HaplotypeScore=206.5756;InbreedingCoeff=0.5388;MQ=57.13;MQ0=10;MQRankSum=-7.795;QD=25.22;ReadPosRankSum=-1.590;VQSLOD=3.9807;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:36:28.78:0,29,836	1/1:5,0:8:4.36:11,4,0	./.	0/0:14,0:8:6.49:0,6,161	0/0:18,0:32:47.64:0,48,1249	0/0:7,0:17:0.81:0,1,137	0/1:9,0:21:10.61:11,0,54	0/0:26,0:26:8.06:0,8,256	1/1:10,13:23:21.07:709,21,0	1/1:14,14:30:36.05:873,36,0	1/1:7,7:14:11.95:248,12,0	0/0:12,0:20:9.02:0,9,256	0/0:18,0:18:45.14:0,45,2250	0/0:16,0:15:30.10:0,30,1627	1/1:8,11:19:27.19:749,27,0	0/1:8,0:23:58.83:59,0,86	0/0:15,0:26:2.52:0,3,167	0/0:13,0:19:16.31:0,16,424	0/1:9,5:14:7.55:348,0,8	1/1:11,13:25:41.97:1102,42,0	1/1:16,7:22:5.98:110,6,0	0/1:6,1:12:57.53:219,0,58	0/0:7,0:12:1.89:0,2,59	0/0:13,0:15:15.48:0,15,243	1/1:9,10:19:24.08:803,24,0	1/1:9,16:25:39.16:1231,39,0	1/1:19,9:25:26.69:741,27,0	./.
chr10	55950085	.	GA	G	7371.34	PASS	AB=0.665;AC=46;AF=0.821;AN=56;BaseQRankSum=0.532;DP=565;FS=0.000;HRun=11;HaplotypeScore=87.1241;InbreedingCoeff=0.5253;MQ=79.40;MQ0=5;MQRankSum=-3.002;QD=16.45;ReadPosRankSum=2.654;VQSLOD=5.5556;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,18:18:50.87:411,51,0	1/1:2,9:11:23.97:197,24,0	0/0:44,1:24:1.94:0,2,225	0/0:37,0:21:1.54:0,2,101	1/1:7,19:26:53.80:431,54,0	1/1:8,16:24:30.27:372,30,0	1/1:2,21:24:64.97:523,65,0	1/1:4,16:20:12.84:303,13,0	1/1:2,9:12:23.01:178,23,0	1/1:4,20:25:61.91:493,62,0	1/1:6,18:24:3.91:239,4,0	1/1:2,11:14:37.98:301,38,0	0/0:11,1:13:8.25:0,8,258	0/0:20,0:20:41.92:0,42,396	1/1:6,15:21:35.95:296,36,0	1/1:5,12:17:12.96:313,13,0	1/1:8,14:22:15.88:326,16,0	1/1:3,8:10:7.11:169,7,0	1/1:5,11:16:0.92:209,1,0	1/1:7,19:26:47.88:394,48,0	1/1:2,14:16:29.96:246,30,0	0/1:7,5:12:13.98:105,0,14	1/1:3,12:15:29.72:229,30,0	1/1:4,16:21:46.83:372,47,0	0/1:4,6:10:10.95:127,0,11	1/1:5,20:25:30.83:449,31,0	1/1:4,27:31:71.90:591,72,0	1/1:3,4:7:11.98:99,12,0
chr10	55950113	.	C	CCAA	8010.13	PASS	AB=0.538;AC=17;AF=0.304;AN=56;BaseQRankSum=-2.616;DP=645;FS=5.880;HRun=0;HaplotypeScore=124.5428;InbreedingCoeff=0.9161;MQ=72.93;MQ0=5;MQRankSum=-7.138;QD=41.94;ReadPosRankSum=1.229;VQSLOD=6.3452;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:48.08:0,48,654	0/0:12,0:12:33.07:0,33,458	0/0:67,0:34:38.18:0,38,481	0/0:60,0:31:28.26:0,28,347	0/0:24,0:24:54.14:0,54,766	1/1:9,15:26:69.15:1283,69,0	1/1:13,12:25:54.12:941,54,0	0/0:18,0:18:33.10:0,33,452	0/0:17,0:17:39.12:0,39,550	0/0:20,0:20:48.14:0,48,641	0/0:18,0:18:33.11:0,33,482	1/1:6,14:20:53.95:955,54,0	0/0:14,0:14:30.06:0,30,415	0/0:13,0:13:30.09:0,30,422	0/0:14,0:14:30.10:0,30,439	1/1:3,15:18:48.16:971,48,0	1/1:5,16:22:45.15:917,45,0	1/1:10,9:18:44.74:723,45,0	0/0:24,0:24:51.16:0,51,717	0/0:28,0:28:60.19:0,60,849	0/0:20,0:20:42.14:0,42,615	0/1:2,11:12:16.80:422,0,17	1/1:6,16:22:54.18:1018,54,0	1/1:9,14:24:44.92:781,45,0	0/0:7,0:7:21.07:0,21,307	0/0:27,0:27:63.18:0,63,837	0/0:36,0:36:75.23:0,75,1055	0/0:10,0:10:30.02:0,30,376
chr10	55950797	.	GGTGT	G	628.42	PASS	AB=0.872;AC=13;AF=0.271;AN=48;BaseQRankSum=0.403;DP=469;FS=3.971;HRun=0;HaplotypeScore=83.2212;InbreedingCoeff=0.4939;MQ=60.92;MQ0=16;MQRankSum=-0.373;QD=4.65;ReadPosRankSum=2.497;VQSLOD=1.5558;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:15.05:0,15,265	0/0:5,0:5:3:0,3,25	./.	./.	0/0:21,0:20:20.87:0,21,355	1/1:8,2:10:3.01:46,3,0	0/1:15,0:18:8.90:64,0,9	0/0:32,0:31:1.82:0,2,5	0/0:7,0:7:6.02:0,6,92	0/0:17,0:17:18.06:0,18,338	0/1:14,0:14:0:0,0,0	1/1:12,4:16:15.04:213,15,0	0/0:16,0:16:18.06:0,18,343	0/0:14,0:14:21.03:0,21,389	0/0:9,0:15:9.03:0,9,185	0/0:13,0:14:8.49:0,8,49	0/1:17,2:25:32.31:32,0,35	0/0:14,0:17:8.23:0,8,37	0/0:16,0:15:9.03:0,9,112	./.	0/0:26,0:20:15.04:0,15,241	1/1:11,0:11:3.01:46,3,0	1/1:8,2:10:3.01:46,3,0	1/1:18,12:28:21.07:324,21,0	0/0:12,0:12:3.01:0,3,49	0/0:16,0:20:21:0,21,245	0/0:11,0:11:18.06:0,18,300	./.
chr10	55951995	.	C	CG	22845.92	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=4.765;DP=698;FS=8.313;HRun=2;HaplotypeScore=122.0092;InbreedingCoeff=0.9991;MQ=86.54;MQ0=0;MQRankSum=-7.826;QD=37.39;ReadPosRankSum=4.314;VQSLOD=3.8140;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,37:41:99:1490,105,0	1/1:0,9:9:27.09:389,27,0	0/0:21,0:21:62.54:0,63,692	0/0:26,0:26:66.20:0,66,791	1/1:2,17:19:48.16:691,48,0	1/1:0,25:25:63.21:907,63,0	1/1:3,35:38:99:1425,99,0	1/1:2,23:25:66.22:946,66,0	1/1:0,25:25:72.24:1036,72,0	1/1:3,22:25:66.21:929,66,0	1/1:2,15:17:39.13:561,39,0	1/1:1,26:27:69.23:993,69,0	0/0:14,0:14:36.11:0,36,446	0/0:26,0:26:72.18:0,72,871	1/1:1,30:31:87.29:1252,87,0	1/1:1,17:18:42.14:601,42,0	1/1:2,26:28:72.24:1036,72,0	1/1:4,32:36:93.31:1334,93,0	1/1:1,18:19:54.18:769,54,0	1/1:2,11:13:30.06:408,30,0	1/1:2,60:62:99:2312,163,0	1/1:1,13:14:33.11:475,33,0	1/1:2,17:19:48.16:690,48,0	1/1:0,19:19:51.17:734,51,0	1/1:2,27:29:78.26:1121,78,0	1/1:3,32:36:99:1364,99,0	1/1:0,25:25:69.23:993,69,0	1/1:2,9:11:27.09:388,27,0
chr10	55952530	.	AGGTAGCCG	A	9127.29	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=14.243;DP=553;FS=4.046;HRun=0;HaplotypeScore=163.0707;InbreedingCoeff=0.9914;MQ=83.71;MQ0=0;MQRankSum=-12.624;QD=49.34;ReadPosRankSum=2.283;VQSLOD=4.6454;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:78.25:0,78,2934	0/0:11,0:11:32.93:0,33,1122	0/0:18,0:18:50.96:0,51,1855	0/0:21,0:21:54.16:0,54,1783	0/0:11,0:11:27.08:0,27,839	0/0:20,0:20:54.17:0,54,2181	0/0:27,0:27:81.25:0,81,2960	0/0:22,0:22:63.21:0,63,2061	1/1:3,23:26:57.20:1593,57,0	1/1:2,16:18:48.09:1090,48,0	1/1:1,8:9:15.01:355,15,0	0/0:25,0:25:75.26:0,75,3051	0/0:15,0:15:39.13:0,39,1603	0/0:30,0:30:87.30:0,87,3667	1/1:2,18:20:37.69:1088,38,0	0/0:15,0:15:45.14:0,45,1611	0/0:38,0:37:99:0,108,4385	0/0:31,0:31:90.24:0,90,3269	1/1:1,16:17:48.08:941,48,0	1/1:3,8:11:18.03:440,18,0	1/1:4,23:27:15.52:403,16,0	0/0:12,0:12:24.08:0,24,1055	0/0:10,0:10:27.09:0,27,996	0/0:32,0:32:96.27:0,96,3617	1/1:1,18:19:39.08:1063,39,0	1/1:1,14:15:30.10:816,30,0	1/1:0,15:15:31.42:920,31,0	1/1:2,6:8:15.05:418,15,0
chr10	55955126	.	AGAGCACCACCCCCTG	A	5812.96	PASS	AC=44;AF=0.846;AN=52;BaseQRankSum=3.907;DP=440;FS=7.349;HRun=0;HaplotypeScore=171.0912;InbreedingCoeff=0.4722;MQ=65.95;MQ0=0;MQRankSum=-2.715;QD=16.75;ReadPosRankSum=2.758;VQSLOD=3.3391;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:13,7:20:3.01:123,3,0	1/1:11,0:10:6:117,6,0	0/0:27,0:25:1.25:0,1,3	0/0:24,0:24:3.01:0,3,94	1/1:8,0:8:5.94:42,6,0	1/1:9,4:13:9.03:369,9,0	1/1:13,0:13:2.99:24,3,0	./.	1/1:10,9:19:18.06:711,18,0	1/1:10,4:14:12.04:252,12,0	./.	1/1:12,12:24:15.05:616,15,0	0/0:14,0:14:18.06:0,18,1141	0/0:16,0:16:30.10:0,30,1644	1/1:12,7:19:3.01:122,3,0	1/1:4,11:15:18.05:738,18,0	1/1:11,17:28:6.02:194,6,0	1/1:7,7:14:6.02:247,6,0	1/1:12,5:17:15.02:470,15,0	1/1:9,4:13:3.01:123,3,0	1/1:40,0:40:19.24:267,19,0	1/1:11,0:10:2.94:18,3,0	1/1:3,4:7:9.03:265,9,0	1/1:9,13:22:3.01:121,3,0	1/1:9,0:9:9.03:223,9,0	1/1:9,3:12:9.02:216,9,0	1/1:6,6:12:12.04:479,12,0	1/1:6,0:6:3.01:77,3,0
chr10	55957461	.	C	CA	6632.21	PASS	AB=0.633;AC=40;AF=0.714;AN=56;BaseQRankSum=-5.210;DP=495;FS=10.384;HRun=11;HaplotypeScore=77.2702;InbreedingCoeff=0.6088;MQ=67.48;MQ0=3;MQRankSum=0.064;QD=17.88;ReadPosRankSum=-1.425;VQSLOD=4.7485;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:32:46.83:0,47,135	1/1:5,5:10:12.02:122,12,0	0/0:19,0:10:17.88:0,18,139	0/0:14,0:8:17.44:0,17,112	0/0:7,0:31:46.63:0,47,149	1/1:3,10:14:9.66:265,10,0	0/1:6,8:14:25.42:131,0,25	1/1:5,16:23:50.69:459,51,0	0/1:5,9:14:36.64:211,0,37	1/1:4,13:17:39.08:396,39,0	1/1:7,14:22:24.27:430,24,0	1/1:8,7:15:15.03:152,15,0	0/0:13,0:13:32.85:0,33,255	0/0:15,0:15:17.21:0,17,277	1/1:2,9:11:21.04:213,21,0	1/1:5,8:13:26.15:286,26,0	1/1:6,17:25:1.46:364,1,0	1/1:1,20:21:59.99:593,60,0	1/1:12,12:24:12.78:301,13,0	0/1:6,5:11:5.28:113,0,5	1/1:2,13:15:33.07:335,33,0	1/1:7,9:17:4.04:205,4,0	1/1:4,11:15:33.07:335,33,0	1/1:3,24:27:30.87:495,31,0	1/1:1,13:15:35.91:349,36,0	1/1:5,11:16:35.91:349,36,0	1/1:4,19:22:39.07:396,39,0	0/1:3,6:9:5.20:134,0,5
chr10	55958888	.	GA	G	1236.26	PASS	AC=36;AF=0.900;AN=40;BaseQRankSum=-0.217;DP=43;FS=11.027;HRun=1;HaplotypeScore=35.8059;InbreedingCoeff=0.2340;MQ=72.69;MQ0=0;MQRankSum=-2.869;QD=33.41;ReadPosRankSum=1.516;VQSLOD=1.8707;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,4:4:9.03:113,9,0	./.	0/0:1,0:1:2.98:0,3,21	0/0:2,0:2:6.02:0,6,71	./.	1/1:0,1:1:3.01:38,3,0	1/1:0,2:2:6.02:80,6,0	1/1:0,2:2:3.01:40,3,0	./.	1/1:0,3:3:9.03:120,9,0	./.	1/1:0,1:1:3.01:37,3,0	1/1:0,1:1:3.01:37,3,0	1/1:0,2:2:6.02:76,6,0	1/1:0,1:1:3.01:42,3,0	1/1:0,2:2:5.98:62,6,0	./.	1/1:0,1:1:3.01:40,3,0	1/1:0,6:6:18.02:225,18,0	./.	./.	./.	1/1:0,1:1:3.01:37,3,0	1/1:0,2:2:6.02:78,6,0	1/1:0,2:2:6.02:80,6,0	1/1:0,3:3:9.03:119,9,0	1/1:0,2:2:6.02:75,6,0	1/1:0,1:1:3.01:39,3,0
chr10	55961616	.	CTCTG	C	2574.89	PASS	AB=0.971;AC=26;AF=0.464;AN=56;BaseQRankSum=-4.390;DP=600;FS=37.509;HRun=0;HaplotypeScore=143.7346;InbreedingCoeff=-0.4030;MQ=45.58;MQ0=30;MQRankSum=-0.553;QD=5.88;ReadPosRankSum=1.075;VQSLOD=1.4729;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:36,0:36:26.34:168,26,0	1/1:8,2:11:6.67:76,7,0	0/0:55,0:5:11.74:0,12,72	0/0:48,0:5:9.36:0,9,61	0/1:23,0:22:0:0,0,0	0/1:21,0:22:94.29:104,0,94	0/1:20,0:20:69.63:70,0,93	1/1:19,0:18:48.39:269,48,0	0/0:25,0:25:7.47:0,7,117	0/1:18,0:18:99:142,0,155	0/1:17,0:17:55.13:73,0,55	0/1:16,2:19:88.78:89,0,274	0/1:27,0:25:99:197,0,203	0/1:18,0:18:41.92:42,0,86	0/1:25,0:25:99:131,0,179	0/1:17,2:19:99:180,0,148	0/1:10,0:10:9.22:9,0,191	0/0:16,0:15:6.40:0,6,312	0/1:17,0:16:28.02:231,0,28	0/1:15,0:15:1.74:101,0,2	0/1:21,1:21:99:176,0,106	0/1:16,2:18:99:101,0,124	0/1:13,1:14:48.32:48,0,118	0/0:17,0:16:10.30:0,10,176	0/1:16,1:17:99:143,0,201	0/1:17,0:17:98.15:98,0,314	0/1:24,1:25:99:219,0,180	0/1:9,0:9:35.49:70,0,35
chr10	55961618	.	CTG	C	3992.13	PASS	AB=0.935;AC=32;AF=0.571;AN=56;BaseQRankSum=-5.666;DP=603;FS=29.542;HRun=0;HaplotypeScore=130.5893;InbreedingCoeff=-0.3670;MQ=45.53;MQ0=32;MQRankSum=-1.240;QD=8.08;ReadPosRankSum=0.906;VQSLOD=1.6526;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:36,0:36:26.38:166,26,0	1/1:10,1:11:20.79:194,21,0	0/0:59,0:5:11.74:0,12,72	0/0:49,0:5:9.36:0,9,60	0/1:23,0:22:0:0,0,0	0/1:21,1:22:21.27:159,0,21	0/1:18,2:21:18.21:249,0,18	1/1:2,16:18:48.39:269,48,0	0/1:24,1:25:20.39:92,0,20	0/1:15,2:18:21.94:270,0,22	0/1:17,0:17:5.49:75,0,5	0/1:17,2:19:61.59:62,0,110	0/1:26,0:25:47.98:191,0,48	0/1:17,0:17:19.58:45,0,20	0/1:23,2:25:45.93:213,0,46	0/1:21,0:21:38.76:218,0,39	0/1:10,0:11:66.98:67,0,77	0/1:17,0:16:98.03:116,0,98	1/1:15,0:15:27.14:289,27,0	1/1:15,0:15:23.48:157,23,0	1/1:19,0:18:14.17:188,14,0	0/1:15,0:16:15.36:132,0,15	0/1:13,0:13:33.50:63,0,34	0/1:7,10:16:35.63:36,0,46	0/1:16,0:16:68.27:110,0,68	0/1:17,0:18:83.34:139,0,83	0/1:24,0:26:0.37:338,0,0	0/1:8,1:9:3.54:155,0,4
chr10	55961622	.	A	AACACACAC	2570.82	PASS	AB=0.845;AC=18;AF=0.346;AN=52;BaseQRankSum=1.679;DP=650;FS=17.986;HRun=0;HaplotypeScore=208.8934;InbreedingCoeff=0.6597;MQ=44.75;MQ0=35;MQRankSum=-3.586;QD=10.37;ReadPosRankSum=-3.697;VQSLOD=0.5966;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:40:35.73:0,36,606	0/0:9,0:11:6.75:0,7,84	1/1:61,0:5:0.47:1,0,0	./.	0/0:21,0:22:5.87:0,6,39	1/1:11,12:25:15.05:447,15,0	1/1:20,2:24:19.84:464,20,0	0/1:22,0:23:40.26:126,0,40	0/0:10,0:26:6.02:0,6,112	0/0:18,0:18:5.74:0,6,277	0/0:17,0:17:11.52:0,12,303	1/1:11,7:20:5.84:139,6,0	0/0:26,0:25:18.20:0,18,872	0/0:18,0:18:9.03:0,9,228	0/0:24,0:24:18.93:0,19,464	0/1:16,0:23:2.64:453,0,3	1/1:16,1:19:27.32:660,27,0	1/1:14,0:12:17.93:201,18,0	0/0:18,0:18:32.49:0,32,537	0/0:15,0:15:17.21:0,17,312	0/0:21,0:21:4.37:0,4,565	./.	1/1:15,1:16:2.99:24,3,0	1/1:22,0:21:11.98:232,12,0	0/0:16,0:16:20.69:0,21,404	0/0:18,0:19:13.13:0,13,224	0/0:24,0:25:16.45:0,16,753	0/0:8,0:8:15:0,15,272
chr10	55967781	.	AAAGGCTGGGCAGC	A	17342.39	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=16.144;DP=537;FS=0.354;HRun=0;HaplotypeScore=204.9527;InbreedingCoeff=0.9730;MQ=78.87;MQ0=0;MQRankSum=-15.247;QD=105.75;ReadPosRankSum=0.210;VQSLOD=4.6997;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,117,7539	0/0:7,0:7:21.07:0,21,1217	0/0:12,0:12:36.11:0,36,1305	0/0:18,0:18:48.04:0,48,1877	0/0:22,0:22:66.18:0,66,4034	0/0:23,0:23:66.23:0,66,4278	0/0:26,0:26:75.26:0,75,4409	0/0:22,0:22:66.23:0,66,4214	1/1:0,15:15:42.14:1746,42,0	1/1:1,16:17:51.18:2074,51,0	1/1:0,7:7:21.07:788,21,0	0/0:20,0:20:60.21:0,60,3912	0/0:21,0:21:63.22:0,63,4054	0/0:28,0:28:84.29:0,84,5541	1/1:0,25:25:69.24:2869,69,0	0/0:21,0:21:60.20:0,60,3618	0/0:35,0:35:99:0,105,6566	0/0:24,0:24:72.25:0,72,4476	1/1:0,7:7:21.05:700,21,0	1/1:0,22:22:60.20:2234,60,0	1/1:0,17:17:39.13:1621,39,0	0/0:18,0:18:51.17:0,51,2956	0/0:11,0:11:32.98:0,33,1857	0/0:26,0:26:78.27:0,78,5102	1/1:0,13:13:33.11:1372,33,0	1/1:0,21:21:57.20:2316,57,0	1/1:0,19:19:36.12:1497,36,0	1/1:0,1:1:3.01:125,3,0
chr10	55968001	.	T	TTTTTTTTC	14882.68	PASS	AB=1.000;AC=41;AF=0.732;AN=56;BaseQRankSum=0.713;DP=436;FS=0.000;HRun=0;HaplotypeScore=107.5125;InbreedingCoeff=0.3725;MQ=54.27;MQ0=4;MQRankSum=-8.313;QD=40.55;ReadPosRankSum=0.460;VQSLOD=4.5688;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:24:69.19:0,69,1683	0/1:5,0:5:3.45:3,0,26	0/1:7,0:6:15.40:15,0,144	0/1:7,0:5:8.83:9,0,99	0/0:15,0:15:39.08:0,39,855	1/1:21,0:21:14.05:755,14,0	1/1:18,0:18:8.15:679,8,0	0/1:26,0:25:76.84:625,0,77	1/1:5,15:19:33.11:1268,33,0	1/1:6,11:15:36.07:847,36,0	1/1:1,19:20:33.11:1142,33,0	1/1:16,0:16:29.57:570,30,0	0/0:16,0:16:38.48:0,38,979	0/0:13,0:13:36.11:0,36,762	1/1:2,8:10:18.06:708,18,0	1/1:14,0:13:25.37:371,25,0	1/1:15,0:12:25.63:615,26,0	0/1:20,0:19:99:423,0,100	1/1:10,19:31:81.19:2066,81,0	1/1:1,7:8:15.04:520,15,0	1/1:5,14:18:12.03:423,12,0	0/1:12,0:12:12.68:397,0,13	0/1:11,0:11:57.53:359,0,58	1/1:18,0:16:11.01:339,11,0	1/1:3,14:17:27.09:1043,27,0	1/1:0,11:13:33.04:872,33,0	1/1:5,6:11:18.05:710,18,0	1/1:0,11:11:3.01:124,3,0
chr10	55968010	.	C	CTTT	5029.02	PASS	AB=0.906;AC=29;AF=0.518;AN=56;BaseQRankSum=7.885;DP=382;FS=1.478;HRun=10;HaplotypeScore=88.2817;InbreedingCoeff=-0.2005;MQ=47.86;MQ0=5;MQRankSum=-5.564;QD=16.54;ReadPosRankSum=2.806;VQSLOD=2.6742;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:26:78.16:0,78,1065	1/1:2,0:2:6.02:77,6,0	0/1:5,0:4:4.03:4,0,79	0/1:6,0:4:22.88:23,0,65	0/0:14,0:14:39.11:0,39,518	0/1:9,8:17:30.90:597,0,31	0/1:15,5:20:62.63:556,0,63	0/1:27,0:26:99:617,0,182	0/1:18,0:16:17.74:69,0,18	0/1:12,0:10:41.25:87,0,41	1/1:14,0:14:17.05:113,17,0	0/1:13,3:16:97.61:313,0,98	0/0:14,0:14:42.13:0,42,596	0/0:11,0:11:30.04:0,30,400	0/1:7,0:7:3:12,0,3	1/1:9,3:11:30.10:497,30,0	0/1:13,4:14:99:314,0,132	0/1:17,2:18:4.52:346,0,5	0/1:22,0:22:99:253,0,303	1/1:6,0:6:8.46:41,8,0	0/1:15,0:13:45.14:45,0,70	1/1:6,4:10:24.03:386,24,0	0/1:4,3:7:12.20:227,0,12	0/1:8,8:14:41.52:251,0,42	0/1:15,0:15:41.70:42,0,79	0/1:10,0:10:24.65:129,0,25	0/0:12,0:12:9.46:0,9,179	1/1:11,0:11:3.01:31,3,0
chr10	55968015	.	TC	T	1767.20	PASS	AB=0.927;AC=26;AF=0.464;AN=56;BaseQRankSum=5.055;DP=372;FS=1.450;HRun=1;HaplotypeScore=86.6837;InbreedingCoeff=0.4419;MQ=47.66;MQ0=6;MQRankSum=-1.331;QD=7.79;ReadPosRankSum=-0.507;VQSLOD=0.5721;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:76.97:0,77,930	1/1:0,2:2:5.94:41,6,0	0/1:4,1:4:4.04:4,0,61	0/1:6,0:4:0.36:0,0,47	0/0:13,0:13:28.87:0,29,357	1/1:14,4:18:38.86:196,39,0	1/1:16,4:19:44.71:273,45,0	0/1:13,16:28:99:395,0,234	0/0:17,1:16:18.09:0,18,381	0/1:10,0:8:15.59:16,0,170	0/0:14,0:14:26.23:0,26,222	1/1:15,2:17:3.40:122,3,0	0/0:16,0:16:48.04:0,48,529	0/0:10,0:10:29.42:0,29,308	0/0:7,0:7:18.06:0,18,217	1/1:7,5:11:29.23:208,29,0	1/1:16,1:14:31.20:161,31,0	1/1:12,5:16:31.43:213,31,0	0/1:20,0:20:35.05:35,0,442	0/0:5,0:5:11.90:0,12,109	0/1:13,0:11:0.76:1,0,108	1/1:9,0:9:22.39:142,22,0	1/1:4,2:6:0.49:57,0,0	0/1:15,1:14:1.06:78,0,1	0/0:15,0:15:26.78:0,27,255	0/1:10,0:10:13.05:13,0,168	0/0:12,0:12:33.10:0,33,406	0/0:6,0:6:3.01:0,3,31
chr10	55968016	.	CT	C	781.78	PASS	AB=0.943;AC=19;AF=0.339;AN=56;BaseQRankSum=5.852;DP=358;FS=6.708;HRun=9;HaplotypeScore=87.8898;InbreedingCoeff=0.6701;MQ=47.93;MQ0=6;MQRankSum=-6.961;QD=4.55;ReadPosRankSum=2.506;VQSLOD=0.5617;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:78.16:0,78,849	0/0:2,0:2:0:0,0,0	0/0:5,0:4:5.23:0,5,42	0/0:5,0:4:5.38:0,5,37	0/1:12,1:13:3.37:3,0,218	1/1:12,6:18:28.37:158,28,0	1/1:13,7:19:28.74:191,29,0	0/1:28,0:28:54.94:55,0,277	0/0:18,0:16:33.02:0,33,343	0/0:10,0:8:15.04:0,15,173	0/0:14,0:14:14.88:0,15,152	1/1:9,8:17:17.04:106,17,0	0/0:15,0:15:39.12:0,39,449	0/0:10,0:10:18.05:0,18,208	0/0:7,0:7:18.01:0,18,187	1/1:11,1:11:10.56:49,11,0	1/1:10,7:14:26.38:203,26,0	1/1:9,6:14:14.51:89,15,0	0/0:19,0:19:34.20:0,34,429	0/0:5,0:5:6.02:0,6,69	0/0:12,0:10:6.02:0,6,69	0/1:8,1:9:2.14:7,0,2	1/1:5,1:6:8.51:52,9,0	1/1:12,4:14:7.26:58,7,0	0/0:13,0:13:18.01:0,18,193	0/0:8,0:8:15.52:0,16,174	0/0:12,0:12:33.10:0,33,379	0/0:1,0:1:2.98:0,3,21
chr10	55968017	.	T	TTTTTC	4820.49	PASS	AB=0.927;AC=29;AF=0.518;AN=56;BaseQRankSum=10.734;DP=365;FS=0.964;HRun=0;HaplotypeScore=97.3839;InbreedingCoeff=0.0477;MQ=45.62;MQ0=7;MQRankSum=-5.413;QD=18.33;ReadPosRankSum=2.531;VQSLOD=4.1460;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:81.16:0,81,1348	0/0:2,0:2:5.42:0,5,22	0/0:5,0:4:6.02:0,6,123	0/1:5,0:3:0.38:0,0,17	0/0:12,0:12:24.75:0,25,488	1/1:10,8:18:3.49:645,3,0	0/1:18,5:22:8.39:427,0,8	0/0:29,0:28:45.04:0,45,516	0/1:18,0:16:51.09:213,0,51	0/1:10,0:8:68.54:120,0,69	1/1:14,0:14:26.78:316,27,0	0/1:15,3:18:39.41:313,0,39	0/0:15,0:15:45.13:0,45,805	0/0:10,0:10:27.03:0,27,418	1/1:7,0:7:15.65:108,16,0	0/1:10,3:12:23.26:248,0,23	1/1:15,4:16:20.77:403,21,0	0/1:14,2:15:4.08:416,0,4	0/1:20,0:19:99:193,0,399	1/1:5,0:5:11.89:139,12,0	0/1:12,0:10:43.81:52,0,44	1/1:5,4:9:15.14:292,15,0	0/1:3,3:6:25.32:227,0,25	1/1:8,8:14:15.29:285,15,0	0/1:13,0:13:99:209,0,152	0/1:8,0:8:33.92:147,0,34	0/1:12,0:12:37.76:38,0,250	1/1:1,0:1:3.01:31,3,0
chr10	55968494	.	CT	C	2779.28	PASS	AB=0.716;AC=43;AF=0.768;AN=56;BaseQRankSum=5.147;DP=553;FS=2.390;HRun=15;HaplotypeScore=66.1037;InbreedingCoeff=0.4564;MQ=70.98;MQ0=13;MQRankSum=-2.475;QD=6.22;ReadPosRankSum=3.558;VQSLOD=2.8245;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:29,7:36:6.42:6,0,406	0/1:3,9:13:2.33:127,0,2	0/0:39,2:19:1.13:0,1,126	0/0:33,1:11:17.86:0,18,117	0/0:15,0:15:17.78:0,18,246	1/1:1,1:8:15.17:54,15,0	1/1:2,0:17:18.29:53,18,0	0/1:20,23:44:18.86:328,0,19	1/1:4,7:14:0.40:107,0,0	1/1:10,13:25:36.25:233,36,0	1/1:9,13:22:26.07:157,26,0	1/1:4,0:20:26.77:81,27,0	0/1:11,1:11:7.38:7,0,53	0/0:16,0:16:38.75:0,39,316	1/1:1,14:15:29.52:190,30,0	1/1:3,1:16:21.27:72,21,0	1/1:4,0:29:46.81:135,47,0	1/1:3,1:19:24.77:84,25,0	0/1:6,10:14:18.57:131,0,19	1/1:2,16:18:20.29:240,20,0	1/1:3,8:11:16.78:101,17,0	1/1:3,0:14:14.20:41,14,0	1/1:5,0:13:14.23:41,14,0	1/1:4,1:13:11.06:41,11,0	1/1:3,5:10:12.93:69,13,0	1/1:5,11:16:32.40:209,32,0	1/1:8,15:26:35.43:204,35,0	1/1:0,14:15:37.51:237,38,0
chr10	55972029	.	GCA	G	3795.74	PASS	AB=0.865;AC=29;AF=0.537;AN=54;BaseQRankSum=9.914;DP=861;FS=3.684;HRun=0;HaplotypeScore=123.1255;InbreedingCoeff=0.1624;MQ=58.53;MQ0=19;MQRankSum=1.474;QD=6.09;ReadPosRankSum=3.746;VQSLOD=3.0170;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:54,2:54:17.86:0,18,1150	1/1:4,0:10:14.29:75,14,0	0/0:28,0:9:5.91:0,6,38	./.	0/1:28,2:30:32.41:32,0,365	1/1:9,10:19:24.07:273,24,0	1/1:20,20:38:31.89:414,32,0	0/1:20,0:21:6.75:28,0,7	0/1:25,1:27:8.03:8,0,662	0/0:27,1:28:8.80:0,9,583	0/0:17,0:17:21.07:0,21,322	1/1:16,20:39:7.97:423,8,0	0/1:28,2:31:24.36:24,0,787	0/0:37,1:37:52.94:0,53,1109	0/1:34,7:41:92.54:93,0,823	1/1:11,20:37:45.92:457,46,0	1/1:8,16:25:13.95:333,14,0	1/1:13,11:25:29.40:344,29,0	0/1:15,2:17:56.31:56,0,180	0/0:23,0:23:47.92:0,48,557	0/1:95,7:102:68.13:68,0,2183	0/1:9,16:27:13.61:249,0,14	1/1:2,14:17:20.47:179,20,0	1/1:13,30:42:51.14:581,51,0	0/1:18,2:20:12.27:12,0,502	0/1:25,5:29:99:102,0,488	0/0:19,1:20:10.96:0,11,604	0/1:11,1:12:43.81:44,0,379
chr10	55972568	.	TCCA	T	5255.83	PASS	AB=0.853;AC=37;AF=0.661;AN=56;BaseQRankSum=-6.506;DP=694;FS=35.014;HRun=0;HaplotypeScore=177.3440;InbreedingCoeff=-0.1610;MQ=45.29;MQ0=56;MQRankSum=-1.078;QD=8.83;ReadPosRankSum=-8.541;VQSLOD=0.5977;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:28,1:26:99:100,0,132	0/1:7,0:6:15.68:138,0,16	0/0:79,1:12:2.72:0,3,191	0/1:98,1:18:8.35:8,0,225	0/1:28,0:28:89.68:90,0,92	1/1:21,7:27:13.22:381,13,0	1/1:17,2:18:13.08:179,13,0	1/1:7,22:31:23.82:866,24,0	1/1:8,4:12:13.46:228,13,0	1/1:22,3:24:35.39:469,35,0	1/1:13,0:14:13.24:136,13,0	0/1:14,4:18:11.86:171,0,12	0/1:21,0:21:4.53:5,0,151	0/0:18,0:16:14.97:0,15,126	0/1:17,4:22:4.08:209,0,4	0/1:14,1:15:17.06:70,0,17	1/1:12,4:16:18.17:234,18,0	1/1:9,1:7:6.24:89,6,0	0/1:8,3:11:18.62:249,0,19	1/1:19,6:24:13.91:299,14,0	1/1:3,3:7:8.92:104,9,0	0/1:15,3:20:28.39:182,0,28	0/1:18,3:21:22.57:71,0,23	0/1:8,2:10:2.22:90,0,2	1/1:20,4:22:8.28:141,8,0	0/1:12,4:15:1.53:365,0,2	0/1:19,10:29:9.20:275,0,9	0/1:6,1:7:13.26:109,0,13
chr10	55972569	.	C	CT	5803.30	PASS	AB=1.000;AC=48;AF=0.857;AN=56;BaseQRankSum=-1.108;DP=683;FS=25.362;HRun=1;HaplotypeScore=169.1290;InbreedingCoeff=0.3265;MQ=45.36;MQ0=56;MQRankSum=-5.443;QD=9.94;ReadPosRankSum=-1.632;VQSLOD=0.8724;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:26:21.12:21,0,124	1/1:5,5:6:17.76:175,18,0	0/0:79,0:13:3.27:0,3,178	0/1:102,0:19:17:17,0,187	0/1:27,0:27:35.91:36,0,100	1/1:24,3:27:39.76:409,40,0	1/1:19,2:18:11.85:112,12,0	1/1:27,0:26:68.41:626,68,0	1/1:12,0:12:23.90:231,24,0	1/1:23,3:22:60.11:474,60,0	1/1:13,0:13:14.79:136,15,0	1/1:11,2:18:27.43:282,27,0	0/1:22,0:22:10.74:11,0,148	0/0:19,0:16:29.37:0,29,160	1/1:20,1:21:32.08:306,32,0	1/1:12,0:15:18.76:154,19,0	1/1:12,1:15:26.83:221,27,0	1/1:6,3:6:14.66:110,15,0	1/1:11,0:11:32.89:279,33,0	1/1:17,6:23:35.76:383,36,0	1/1:7,0:7:8.91:80,9,0	1/1:14,2:19:23.95:245,24,0	1/1:14,1:19:15:164,15,0	1/1:10,1:10:8.97:94,9,0	1/1:26,1:23:8.31:89,8,0	1/1:9,6:15:42.09:511,42,0	1/1:25,1:30:47.90:476,48,0	1/1:9,0:7:17.87:161,18,0
chr10	55972570	.	CA	C	9338.43	PASS	AB=0.985;AC=54;AF=0.964;AN=56;BaseQRankSum=-3.399;DP=683;FS=0.983;HRun=1;HaplotypeScore=154.9792;InbreedingCoeff=-0.0346;MQ=45.32;MQ0=56;MQRankSum=-0.261;QD=13.67;ReadPosRankSum=2.391;VQSLOD=4.4452;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,24:27:68.66:783,69,0	1/1:10,0:6:8.12:79,8,0	0/1:81,1:14:18.06:18,0,190	0/1:103,2:20:39.11:39,0,187	1/1:4,23:26:47.92:659,48,0	1/1:15,14:27:60.42:520,60,0	1/1:8,12:16:26.79:212,27,0	1/1:26,1:26:59.76:542,60,0	1/1:8,6:12:32.81:289,33,0	1/1:12,15:22:62.76:738,63,0	1/1:6,9:13:17.79:167,18,0	1/1:11,7:18:41.55:329,42,0	1/1:1,21:22:54.17:736,54,0	1/1:4,15:17:36.06:463,36,0	1/1:8,14:21:41.24:403,41,0	1/1:6,9:15:30.40:244,30,0	1/1:7,8:15:29.99:331,30,0	1/1:7,2:5:9.01:99,9,0	1/1:3,7:10:27.07:326,27,0	1/1:14,10:23:39.01:414,39,0	1/1:5,2:7:9.02:106,9,0	1/1:12,7:18:20.09:164,20,0	1/1:9,10:19:20.71:150,21,0	1/1:6,5:9:8.97:85,9,0	1/1:9,18:23:32.48:252,32,0	1/1:13,4:15:41.90:437,42,0	1/1:17,13:30:51.17:523,51,0	1/1:5,4:7:20.96:234,21,0
chr10	55972613	.	T	TC	3901.87	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=3.173;DP=542;FS=6.896;HRun=4;HaplotypeScore=187.5165;InbreedingCoeff=0.9775;MQ=62.77;MQ0=3;MQRankSum=-8.886;QD=28.69;ReadPosRankSum=-0.690;VQSLOD=1.3831;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:30:60.17:0,60,680	0/0:6,0:6:18.05:0,18,204	0/0:36,0:24:19.82:0,20,447	0/0:50,0:27:34.77:0,35,409	0/0:21,0:21:38.88:0,39,432	1/1:5,11:15:26.33:383,26,0	1/1:3,14:17:42.10:552,42,0	0/0:26,0:26:66.18:0,66,748	0/0:13,0:13:33.09:0,33,374	0/0:26,0:26:69.19:0,69,781	0/0:16,0:16:27.08:0,27,306	1/1:2,11:13:33.07:429,33,0	0/0:24,0:24:48.13:0,48,544	0/0:21,0:20:57.16:0,57,643	0/0:28,0:28:69.19:0,69,782	1/1:3,20:23:29.22:785,29,0	1/1:2,11:13:36.08:470,36,0	1/1:3,5:6:10.28:126,10,0	0/0:12,0:12:27.03:0,27,288	0/0:19,0:19:45.11:0,45,501	0/0:7,0:7:9.02:0,9,102	1/1:3,9:12:33.07:429,33,0	1/1:3,16:19:39.04:490,39,0	1/1:3,12:14:14.05:239,14,0	0/0:23,0:23:51.14:0,51,578	0/0:16,0:16:36.10:0,36,408	0/0:20,0:20:45.13:0,45,510	0/0:9,0:9:24.07:0,24,272
chr10	55972633	.	T	TC	17037.36	PASS	AB=0.905;AC=54;AF=0.964;AN=56;BaseQRankSum=-3.247;DP=581;FS=0.000;HRun=5;HaplotypeScore=156.9988;InbreedingCoeff=-0.0381;MQ=62.47;MQ0=5;MQRankSum=-3.815;QD=29.32;ReadPosRankSum=3.322;VQSLOD=2.6425;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,30:30:41.94:1041,42,0	1/1:2,7:9:24.08:325,24,0	0/1:43,4:25:97.74:220,0,98	0/1:42,5:23:83.93:170,0,84	1/1:5,20:25:44.83:609,45,0	1/1:3,14:16:41.77:579,42,0	1/1:5,14:19:42.13:578,42,0	1/1:8,10:16:42.13:572,42,0	1/1:3,13:16:45.15:634,45,0	1/1:7,18:25:62.69:854,63,0	1/1:4,19:23:54.01:746,54,0	1/1:3,10:13:38.92:525,39,0	1/1:3,17:20:57.19:809,57,0	1/1:0,20:18:54.15:753,54,0	1/1:6,25:31:75.21:1036,75,0	1/1:1,24:25:72.24:1034,72,0	1/1:4,12:16:39.58:523,40,0	1/1:2,8:9:21.02:278,21,0	1/1:2,8:10:30.08:402,30,0	1/1:6,15:21:45.14:622,45,0	1/1:4,5:9:14.79:208,15,0	1/1:6,12:18:42.09:561,42,0	1/1:4,14:18:27.09:387,27,0	1/1:2,14:15:36.12:512,36,0	1/1:2,23:25:69.23:991,69,0	1/1:2,18:20:57.19:820,57,0	1/1:3,20:23:66.22:945,66,0	1/1:0,7:7:21.07:302,21,0
chr10	55973540	.	TTTTG	T	12206.78	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=11.794;DP=710;FS=0.931;HRun=0;HaplotypeScore=114.4893;InbreedingCoeff=0.9808;MQ=64.63;MQ0=5;MQRankSum=-0.228;QD=22.52;ReadPosRankSum=1.333;VQSLOD=4.2490;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:78.25:0,78,1784	1/1:2,6:8:11.68:164,12,0	0/0:31,0:25:33.09:0,33,652	0/0:19,0:17:15.05:0,15,209	0/0:32,0:32:69.23:0,69,1579	1/1:5,20:25:30.10:482,30,0	1/1:12,12:24:24.08:385,24,0	1/1:16,14:29:39.05:501,39,0	1/1:11,19:30:30.10:482,30,0	1/1:10,16:26:48.16:766,48,0	1/1:4,13:17:33.07:501,33,0	1/1:9,19:28:51.17:819,51,0	0/0:18,0:18:30.10:0,30,675	0/0:26,0:26:57.19:0,57,1296	1/1:5,14:19:24.08:386,24,0	1/1:6,21:26:28.40:613,28,0	1/1:5,29:31:51.17:819,51,0	1/1:7,19:26:32.60:491,33,0	1/1:15,11:26:33.04:471,33,0	1/1:8,20:28:57.19:903,57,0	1/1:9,20:29:36.12:578,36,0	1/1:8,12:20:33.07:489,33,0	1/1:8,15:23:19.20:335,19,0	1/1:11,29:39:66.23:1060,66,0	1/1:8,8:16:15.05:241,15,0	1/1:8,22:30:66.19:998,66,0	1/1:5,9:14:15.05:240,15,0	1/1:4,18:22:30.10:482,30,0
chr10	55975599	.	A	AG	370.81	PASS	AB=0.667;AC=20;AF=0.714;AN=28;BaseQRankSum=-1.894;DP=61;FS=0.000;HRun=12;HaplotypeScore=22.1859;InbreedingCoeff=0.2708;MQ=114.69;MQ0=2;MQRankSum=0.839;QD=11.24;ReadPosRankSum=0.168;VQSLOD=1.4133;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:0,1:1:0:0,0,0	./.	0/0:22,0:10:9.63:0,10,140	0/1:10,0:7:0.78:30,0,1	./.	./.	1/1:0,2:2:6.01:60,6,0	1/1:2,2:4:4.83:43,5,0	1/1:1,1:2:3.01:34,3,0	1/1:0,1:1:3.01:40,3,0	0/1:1,1:2:0.08:9,0,0	./.	./.	0/0:1,0:1:1.25:0,1,3	1/1:0,1:1:3.01:32,3,0	1/1:1,2:3:6.02:69,6,0	./.	./.	./.	./.	./.	0/1:0,1:1:0:0,0,0	./.	./.	./.	1/1:0,3:3:9.03:107,9,0	1/1:2,1:3:1.38:34,1,0	./.
chr10	55977226	.	CGCGTGT	C	5792.09	PASS	AB=0.788;AC=44;AF=0.786;AN=56;BaseQRankSum=2.661;DP=586;FS=2.914;HRun=0;HaplotypeScore=126.5332;InbreedingCoeff=0.6343;MQ=64.01;MQ0=21;MQRankSum=-4.718;QD=12.12;ReadPosRankSum=3.012;VQSLOD=3.5164;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:41.67:0,42,423	0/1:4,11:15:9.20:162,0,9	0/0:23,0:12:11.10:0,11,139	0/1:26,0:12:19.68:20,0,94	0/0:12,0:12:23.24:0,23,164	1/1:3,16:20:11.97:199,12,0	1/1:1,18:19:5.61:60,6,0	1/1:26,0:23:35.71:421,36,0	1/1:2,0:29:19.78:258,20,0	1/1:4,0:24:44.83:442,45,0	1/1:2,0:11:6.02:94,6,0	1/1:14,3:18:53.51:565,54,0	0/0:19,0:19:44.69:0,45,783	0/0:32,0:31:88.95:0,89,1461	1/1:2,0:24:21.45:337,21,0	1/1:0,12:13:8.77:187,9,0	1/1:2,24:27:5.41:74,5,0	1/1:23,2:26:63.14:579,63,0	1/1:19,0:18:31.58:345,32,0	1/1:11,0:11:14.95:118,15,0	1/1:37,0:36:65.86:533,66,0	1/1:1,15:16:5.95:90,6,0	1/1:4,1:11:3.01:73,3,0	1/1:1,31:32:9.50:187,10,0	1/1:3,0:19:6.02:104,6,0	1/1:6,0:20:38.87:322,39,0	1/1:9,0:17:40.79:518,41,0	1/1:1,0:13:9:103,9,0
chr10	55977228	.	CGT	C	500.48	PASS	AB=1.000;AC=35;AF=0.875;AN=40;BaseQRankSum=5.232;DP=577;FS=4.082;HRun=0;HaplotypeScore=117.7990;InbreedingCoeff=0.3594;MQ=61.27;MQ0=22;MQRankSum=-4.754;QD=1.39;ReadPosRankSum=1.485;VQSLOD=2.2990;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:17,7:24:3.01:32,3,0	1/1:15,0:15:5.57:28,6,0	./.	./.	./.	1/1:18,0:18:4.20:17,4,0	0/1:19,0:19:0.10:0,0,0	./.	1/1:29,0:29:11.27:54,11,0	1/1:24,0:23:1.54:32,2,0	1/1:12,0:11:5.83:33,6,0	1/1:18,0:18:9.41:44,9,0	0/0:19,0:20:3.84:0,4,162	0/0:32,0:31:21.16:0,21,394	1/1:23,0:23:17.04:84,17,0	1/1:13,0:13:8.52:42,9,0	1/1:28,0:28:2.40:13,2,0	1/1:25,0:25:8.62:46,9,0	./.	./.	./.	1/1:15,0:16:2.84:14,3,0	1/1:11,0:12:2.84:14,3,0	1/1:33,0:32:4.25:17,4,0	1/1:21,0:19:5.68:28,6,0	./.	1/1:17,0:17:19.88:98,20,0	1/1:12,0:13:2.84:14,3,0
chr10	55977720	.	GAAAAAAGA	G	3544.63	PASS	AB=0.966;AC=17;AF=0.315;AN=54;BaseQRankSum=9.425;DP=622;FS=10.231;HRun=0;HaplotypeScore=126.4686;InbreedingCoeff=0.7917;MQ=49.66;MQ0=45;MQRankSum=-9.614;QD=18.85;ReadPosRankSum=0.420;VQSLOD=2.1191;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:41:18.04:0,18,545	0/0:7,0:7:15.05:0,15,524	0/0:12,0:3:2.90:0,3,16	0/0:17,0:3:5.12:0,5,28	0/0:30,0:30:48.16:0,48,1668	1/1:4,18:22:45.15:999,45,0	1/1:9,5:13:9.03:186,9,0	0/0:24,0:15:21.07:0,21,663	0/0:27,0:26:21.05:0,21,696	0/0:38,0:36:66.22:0,66,2420	0/0:21,0:21:35.87:0,36,1259	1/1:12,10:21:12.04:297,12,0	0/0:22,0:22:26.93:0,27,840	0/0:19,0:17:15.05:0,15,612	0/1:27,1:27:10.62:11,0,671	1/1:6,11:17:30.10:631,30,0	1/1:12,12:23:3.82:106,4,0	1/1:10,9:19:14.78:308,15,0	0/0:27,0:19:45.15:0,45,1488	0/0:24,0:23:30.10:0,30,1187	0/0:11,0:7:15.05:0,15,603	1/1:3,20:23:30.10:658,30,0	1/1:8,11:18:17.62:348,18,0	./.	0/0:25,0:23:45.99:0,46,1253	0/0:33,0:32:69.23:0,69,2436	0/0:33,0:31:45.61:0,46,1401	0/0:4,0:4:3.01:0,3,123
chr10	55979438	.	T	TAG	10002.30	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-17.344;DP=650;FS=8.975;HRun=0;HaplotypeScore=77.0772;InbreedingCoeff=0.9728;MQ=72.72;MQ0=0;MQRankSum=-0.297;QD=47.18;ReadPosRankSum=2.188;VQSLOD=5.9833;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:81.26:0,81,1174	0/0:1,0:1:3.01:0,3,44	0/0:24,0:23:66.19:0,66,934	0/0:30,0:29:66.19:0,66,928	0/0:26,0:26:75.25:0,75,1104	1/1:3,16:19:42.14:787,42,0	1/1:1,21:23:60.21:1124,60,0	0/0:32,0:32:93.27:0,93,1346	0/0:26,0:26:78.23:0,78,1124	0/0:30,0:30:87.27:0,87,1244	0/0:15,0:15:42.13:0,42,599	1/1:0,26:26:72.25:1349,72,0	0/0:21,0:21:57.18:0,57,820	0/0:24,0:24:69.23:0,69,1012	0/0:32,0:32:96.31:0,96,1394	1/1:2,26:28:66.23:1236,66,0	1/1:1,23:24:66.23:1236,66,0	1/1:1,11:12:33.11:618,33,0	0/0:10,0:10:27.08:0,27,380	0/0:19,0:19:57.19:0,57,839	0/0:32,0:32:90.28:0,90,1303	1/1:1,16:17:48.16:899,48,0	1/1:3,18:21:48.64:900,49,0	1/1:5,37:42:99:1854,99,0	0/0:14,0:14:42.13:0,42,600	0/0:28,0:28:81.27:0,81,1193	0/0:28,0:28:78.25:0,78,1128	0/0:17,0:17:51.17:0,51,747
chr10	55981790	.	C	CTTGTTTGT	22945.06	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-5.915;DP=764;FS=7.151;HRun=0;HaplotypeScore=147.4698;InbreedingCoeff=0.9645;MQ=54.64;MQ0=2;MQRankSum=-12.371;QD=39.56;ReadPosRankSum=-0.728;VQSLOD=3.8951;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,119,2545	1/1:1,13:15:17.41:644,17,0	0/0:27,0:23:26.44:0,26,668	0/0:25,0:19:35.80:0,36,698	0/0:28,0:28:66.11:0,66,1410	1/1:3,0:22:24.08:856,24,0	1/1:21,0:21:44.49:347,44,0	1/1:7,16:30:69.01:1155,69,0	1/1:10,28:41:39.13:1638,39,0	1/1:4,33:42:96.27:3341,96,0	1/1:0,18:18:42.02:1548,42,0	1/1:4,0:36:15.05:511,15,0	0/0:31,0:31:90.23:0,90,2144	0/0:26,0:26:75.21:0,75,1837	1/1:0,20:22:30.09:1116,30,0	1/1:5,1:29:24.08:828,24,0	1/1:7,0:23:15.04:429,15,0	1/1:9,0:27:9.03:326,9,0	1/1:9,10:19:33.05:1000,33,0	1/1:9,20:31:51.12:1890,51,0	1/1:10,15:29:18.06:690,18,0	1/1:7,1:31:26.98:770,27,0	1/1:4,0:16:15.05:508,15,0	1/1:9,0:31:14.97:418,15,0	1/1:3,14:21:27.09:1116,27,0	1/1:5,17:27:62.93:1654,63,0	1/1:4,23:32:42.13:1654,42,0	1/1:4,12:16:12.04:504,12,0
chr10	55985892	.	A	AG	10862.23	PASS	AB=1.000;AC=54;AF=0.964;AN=56;BaseQRankSum=-0.629;DP=663;FS=40.964;HRun=2;HaplotypeScore=108.9764;InbreedingCoeff=-0.0472;MQ=80.16;MQ0=0;MQRankSum=-4.213;QD=16.38;ReadPosRankSum=5.242;VQSLOD=2.6254;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:43,1:44:99:787,113,0	1/1:9,0:9:4.81:135,5,0	0/1:14,0:14:57.61:99,0,58	0/1:15,0:16:54.34:118,0,54	1/1:27,0:27:49.91:434,50,0	1/1:16,0:16:35.49:235,35,0	1/1:27,0:27:73.93:488,74,0	1/1:29,1:29:82.15:515,82,0	1/1:24,0:24:47.18:415,47,0	1/1:24,1:25:73.01:461,73,0	1/1:15,0:15:4.51:205,5,0	1/1:31,0:31:76.85:514,77,0	1/1:21,0:21:50.22:326,50,0	1/1:23,0:23:54.10:352,54,0	1/1:17,0:17:50.15:322,50,0	1/1:28,0:28:71.02:487,71,0	1/1:34,0:34:79.98:533,80,0	1/1:25,0:25:56.24:375,56,0	1/1:27,0:27:75.30:461,75,0	1/1:18,0:18:30.81:312,31,0	1/1:40,0:40:81.79:647,82,0	1/1:21,2:23:42.48:431,42,0	1/1:28,1:29:77.05:542,77,0	1/1:27,0:27:48.26:420,48,0	1/1:24,0:23:19.60:368,20,0	1/1:20,0:20:55.79:347,56,0	1/1:20,0:19:53.25:357,53,0	1/1:9,0:9:26.63:176,27,0
chr10	55986429	.	CCAA	C	324.89	PASS	AB=0.963;AC=17;AF=0.304;AN=56;BaseQRankSum=7.068;DP=389;FS=36.834;HRun=0;HaplotypeScore=84.0603;InbreedingCoeff=-0.1559;MQ=43.73;MQ0=27;MQRankSum=-2.569;QD=1.72;ReadPosRankSum=3.199;VQSLOD=-0.4037;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:30:46.72:0,47,619	0/1:9,0:9:2.40:2,0,126	0/0:5,0:1:2.90:0,3,16	0/0:4,0:1:0:0,0,0	0/0:23,0:22:57.22:0,57,603	0/0:8,0:8:7.09:0,7,52	0/0:11,0:9:5.16:0,5,31	0/0:18,0:18:36.16:0,36,283	0/1:7,1:8:41.47:98,0,41	0/1:12,0:11:5.74:6,0,102	0/1:16,0:14:26.45:26,0,61	0/1:18,0:18:0.26:0,0,60	0/0:12,0:11:28.73:0,29,256	0/0:19,0:19:53.14:0,53,530	0/1:13,0:13:17.76:18,0,82	0/1:6,0:7:12.29:13,0,12	0/1:12,0:11:22.19:22,0,62	0/0:22,0:17:28.49:0,28,120	0/0:14,0:13:10.30:0,10,187	0/1:11,0:12:43.51:49,0,44	0/0:9,0:8:10.88:0,11,54	0/1:14,0:14:2.72:3,0,31	0/0:21,0:20:3.36:0,3,34	1/1:12,0:11:1.94:7,2,0	0/1:16,0:15:13.14:13,0,148	0/1:13,0:12:1.75:2,0,109	0/1:16,3:19:34.60:196,0,35	1/1:7,0:2:1.55:4,2,0
chr10	55986430	.	CAAAAA	C	2754.51	PASS	AB=0.714;AC=21;AF=0.375;AN=56;BaseQRankSum=3.822;DP=399;FS=7.625;HRun=19;HaplotypeScore=89.2793;InbreedingCoeff=0.6603;MQ=45.51;MQ0=28;MQRankSum=-6.515;QD=16.90;ReadPosRankSum=6.926;VQSLOD=-0.7007;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:33:51.06:0,51,834	0/0:3,0:9:21.05:0,21,230	0/0:7,0:1:3:0,3,29	0/0:5,0:2:2.04:0,2,6	0/0:19,0:23:42.49:0,42,678	1/1:3,5:8:11.96:168,12,0	1/1:3,8:9:14.98:200,15,0	0/0:14,0:18:24.73:0,25,266	0/0:6,0:8:16.85:0,17,90	0/0:4,0:10:8.38:0,8,91	0/0:6,0:14:7.47:0,7,114	1/1:3,15:18:29.65:419,30,0	0/0:12,0:11:15.05:0,15,342	0/0:19,0:20:54.14:0,54,1120	0/0:4,0:13:13.97:0,14,74	1/1:2,4:7:11.95:154,12,0	1/1:5,7:11:6.68:156,7,0	1/1:8,14:17:26.48:434,26,0	0/0:11,0:15:22.49:0,22,248	0/0:11,0:12:6.63:0,7,113	0/1:5,0:8:5.53:8,0,6	1/1:3,11:14:29.92:402,30,0	1/1:3,17:20:48.11:640,48,0	1/1:2,9:11:23.23:334,23,0	0/1:12,0:15:13.05:13,0,176	0/1:6,1:12:25.26:25,0,100	0/0:13,0:19:15.91:0,16,174	0/0:7,0:2:2.88:0,3,15
chr10	55986446	.	A	AG	640.49	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=7.449;DP=435;FS=3.055;HRun=0;HaplotypeScore=81.4846;InbreedingCoeff=0.8404;MQ=57.35;MQ0=18;MQRankSum=-7.964;QD=4.61;ReadPosRankSum=4.593;VQSLOD=3.3480;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:36:65.47:0,65,565	0/0:9,0:9:21.99:0,22,145	0/0:14,0:4:9.38:0,9,53	0/0:14,0:7:7.92:0,8,68	0/0:23,0:23:50:0,50,417	1/1:7,0:7:14.31:72,14,0	1/1:11,0:11:19.45:98,19,0	0/0:28,0:26:55.79:0,56,452	0/0:6,0:6:14.71:0,15,91	0/0:12,0:12:26.68:0,27,176	0/0:19,0:18:50.09:0,50,333	1/1:19,0:19:22.04:102,22,0	0/0:10,0:9:27.01:0,27,261	0/0:23,0:23:65.71:0,66,598	0/1:13,0:13:6.52:7,0,86	1/1:7,0:7:9.99:44,10,0	1/1:14,0:13:1.35:76,1,0	1/1:20,0:16:25.48:116,25,0	0/0:15,0:14:35.92:0,36,259	0/0:13,0:13:32.63:0,33,237	0/0:8,0:8:9.62:0,10,52	1/1:15,0:15:30.57:127,31,0	1/1:21,0:21:35.81:139,36,0	1/1:12,0:12:18.20:64,18,0	0/0:15,1:16:29.64:0,30,290	0/0:17,0:16:39.34:0,39,258	0/0:21,3:23:26.04:0,26,325	0/0:7,0:2:5.97:0,6,44
chr10	55986447	.	AAAG	A	123.46	PASS	AB=0.979;AC=17;AF=0.304;AN=56;BaseQRankSum=10.872;DP=436;FS=0.000;HRun=0;HaplotypeScore=95.7953;InbreedingCoeff=-0.2634;MQ=58.96;MQ0=14;MQRankSum=-9.340;QD=0.56;ReadPosRankSum=8.200;VQSLOD=0.6022;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:36:40.03:0,40,531	0/0:9,0:9:19.34:0,19,95	0/0:15,0:5:6.66:0,7,69	0/0:14,0:7:8.27:0,8,81	0/0:24,0:24:40.13:0,40,443	0/1:7,0:7:1.39:1,0,38	0/0:11,0:11:3.77:0,4,61	0/0:28,0:26:42.74:0,43,387	1/1:6,0:6:3.98:23,4,0	0/0:12,0:12:10.51:0,11,129	0/1:19,0:18:11.84:12,0,137	0/1:20,0:20:22.17:22,0,78	0/0:11,0:10:29.04:0,29,333	0/0:24,0:24:58.03:0,58,792	0/1:13,0:13:8.89:9,0,36	0/1:7,0:7:5.30:5,0,16	0/0:14,0:13:4.43:0,4,71	0/1:19,0:16:6.62:7,0,31	0/1:15,0:14:14.45:14,0,123	0/1:7,6:13:59.59:60,0,108	0/1:8,0:8:5.78:6,0,41	0/1:16,0:16:5.32:5,0,71	0/1:21,0:21:24.08:24,0,29	0/1:12,0:12:14.31:14,0,25	0/0:16,0:16:15.47:0,15,140	0/1:17,0:16:2.84:3,0,109	0/1:23,0:23:33.71:34,0,98	0/1:5,0:2:17.39:30,0,17
chr10	55986784	.	GA	G	8795.14	PASS	AB=0.533;AC=43;AF=0.768;AN=56;BaseQRankSum=9.286;DP=541;FS=11.393;HRun=8;HaplotypeScore=54.0696;InbreedingCoeff=0.8817;MQ=63.66;MQ0=15;MQRankSum=-2.791;QD=22.49;ReadPosRankSum=2.250;VQSLOD=4.6504;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,108,1283	1/1:0,3:3:6.01:58,6,0	0/0:17,0:4:12.03:0,12,135	0/0:29,0:13:29.43:0,29,300	0/0:33,0:33:87.25:0,87,1030	1/1:1,21:22:54.08:521,54,0	1/1:6,18:23:17.42:430,17,0	1/1:11,24:30:66.09:632,66,0	1/1:2,17:19:48.07:464,48,0	1/1:3,21:24:60.07:572,60,0	0/1:1,7:8:6.67:127,0,7	1/1:1,17:18:45.07:434,45,0	0/0:17,0:16:45.10:0,45,528	0/0:15,0:15:42.13:0,42,507	1/1:1,7:8:21.03:203,21,0	1/1:0,17:17:51.08:493,51,0	1/1:3,29:31:87.13:839,87,0	1/1:2,17:18:24.32:411,24,0	1/1:5,18:21:53.09:487,53,0	1/1:1,13:14:32.98:319,33,0	1/1:3,5:8:12.02:116,12,0	1/1:2,7:9:21.03:203,21,0	1/1:5,15:20:41.33:405,41,0	1/1:2,22:24:60.08:579,60,0	1/1:4,9:12:24.03:232,24,0	1/1:3,17:20:51.08:492,51,0	1/1:2,17:19:48.07:461,48,0	1/1:0,11:11:33.05:319,33,0
chr10	55993061	.	T	TA	4283.36	PASS	AB=0.775;AC=25;AF=0.446;AN=56;BaseQRankSum=-7.078;DP=587;FS=7.365;HRun=10;HaplotypeScore=67.1192;InbreedingCoeff=0.6162;MQ=65.19;MQ0=15;MQRankSum=0.801;QD=13.82;ReadPosRankSum=1.665;VQSLOD=4.7383;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:83.78:0,84,681	1/1:2,6:8:15.04:160,15,0	0/1:24,0:11:0.05:0,0,95	0/0:24,0:10:8.84:0,9,61	0/0:29,0:29:68.92:0,69,566	0/1:23,0:27:9.37:9,0,442	0/0:13,0:15:29.96:0,30,246	0/1:17,11:23:25.76:350,0,26	1/1:1,11:12:5.55:263,6,0	1/1:4,21:25:35.63:577,36,0	1/1:4,14:17:17.38:333,17,0	0/0:14,0:14:38.93:0,39,316	0/0:9,0:10:23.01:0,23,178	0/0:16,0:16:38.93:0,39,316	0/1:7,9:16:16.14:255,0,16	0/0:18,0:20:43.93:0,44,350	0/0:30,0:30:52.78:0,53,612	0/0:28,0:28:41.77:0,42,498	0/1:17,9:20:40.57:253,0,41	1/1:8,21:30:6.95:507,7,0	1/1:4,6:10:15.04:160,15,0	0/0:13,0:15:6.08:0,6,207	0/0:17,0:18:13.88:0,14,276	0/0:14,0:15:38.92:0,39,313	1/1:6,11:17:20.59:224,21,0	1/1:8,18:25:26.50:487,26,0	1/1:8,14:22:14.44:346,14,0	1/1:1,12:13:14.46:359,14,0
chr10	55999868	.	C	CA	4762.99	PASS	AB=0.833;AC=19;AF=0.339;AN=56;BaseQRankSum=-4.154;DP=673;FS=11.673;HRun=8;HaplotypeScore=58.3271;InbreedingCoeff=0.9445;MQ=43.11;MQ0=52;MQRankSum=0.557;QD=19.68;ReadPosRankSum=0.277;VQSLOD=3.6796;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:35:92.95:0,93,832	0/1:12,0:10:2.14:2,0,156	0/0:14,0:8:19.82:0,20,170	0/0:9,0:5:15.01:0,15,135	0/0:34,0:27:74.95:0,75,669	1/1:6,21:25:54.09:606,54,0	1/1:6,16:21:47.76:499,48,0	0/0:26,0:24:63.02:0,63,577	0/0:16,0:15:39.02:0,39,357	0/0:27,0:23:53.98:0,54,484	0/0:35,0:26:60:0,60,542	1/1:6,17:20:44.97:499,45,0	0/0:16,0:13:18.17:0,18,279	0/0:19,0:17:28.81:0,29,368	0/0:19,0:19:53.89:0,54,469	1/1:7,10:16:36.03:385,36,0	1/1:2,23:25:66.20:761,66,0	1/1:10,20:26:38.55:664,39,0	0/0:24,0:20:51.01:0,51,461	0/0:30,1:25:25.41:0,25,487	0/0:15,0:15:42:0,42,378	1/1:7,18:22:30.09:345,30,0	1/1:8,11:17:33.10:379,33,0	1/1:1,20:20:54.16:623,54,0	0/0:24,0:20:53.88:0,54,466	0/0:15,0:14:33.02:0,33,302	0/0:22,0:20:48:0,48,438	0/0:7,0:7:21.01:0,21,192
chr10	55999964	.	C	CG	3491.79	PASS	AB=0.672;AC=11;AF=0.196;AN=56;BaseQRankSum=-2.595;DP=543;FS=3.260;HRun=5;HaplotypeScore=76.5848;InbreedingCoeff=0.2587;MQ=50.88;MQ0=2;MQRankSum=3.578;QD=19.08;ReadPosRankSum=1.016;VQSLOD=3.2475;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:30:62.90:0,63,632	0/0:4,0:4:3.01:0,3,32	0/0:15,0:7:20.97:0,21,209	0/0:11,0:7:12.48:0,12,129	0/0:22,0:18:24.02:0,24,246	0/1:13,8:18:52.31:238,0,52	0/1:9,13:18:21.89:431,0,22	0/0:33,0:28:55.56:0,56,512	0/0:12,0:9:24.06:0,24,258	0/0:21,0:13:33.08:0,33,354	0/0:16,0:11:24.04:0,24,244	0/1:7,7:10:64.84:210,0,65	0/0:16,0:14:39.06:0,39,406	0/0:15,0:13:27.06:0,27,287	0/0:12,0:12:30.04:0,30,300	1/1:7,16:21:12.90:513,13,0	1/1:10,17:24:1.25:651,1,0	0/1:11,16:22:2.10:621,0,2	0/0:24,0:18:33.93:0,34,334	0/0:17,0:14:27.95:0,28,290	0/0:25,0:24:48.11:0,48,514	0/1:8,10:16:24.94:359,0,25	0/1:9,5:13:3.15:201,0,3	0/1:9,8:14:5.18:269,0,5	0/0:16,0:11:30.06:0,30,313	0/0:18,0:13:30.07:0,30,321	0/0:27,0:21:48.12:0,48,513	0/0:19,0:13:39.01:0,39,402
chr10	55999999	.	CT	C	1141.09	PASS	AB=0.735;AC=21;AF=0.375;AN=56;BaseQRankSum=5.643;DP=550;FS=16.896;HRun=15;HaplotypeScore=85.3342;InbreedingCoeff=0.2511;MQ=61.00;MQ0=6;MQRankSum=-5.855;QD=4.09;ReadPosRankSum=-0.047;VQSLOD=-0.1003;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,5:34:13.71:0,14,313	0/0:1,0:1:2.84:0,3,14	0/0:28,1:13:1.32:0,1,96	0/0:20,0:7:9.16:0,9,46	0/1:14,0:13:26.77:27,0,50	0/0:17,0:17:19.99:0,20,205	0/1:18,1:23:21.33:21,0,176	0/1:24,1:26:0.73:1,0,252	1/1:6,2:7:15.89:89,16,0	0/1:13,6:19:4.64:86,0,5	0/1:5,3:8:12.44:50,0,12	0/0:16,0:17:13.95:0,14,220	0/0:12,0:12:8.87:0,9,95	0/0:14,0:15:8.56:0,9,158	0/1:5,7:14:2.49:91,0,2	0/1:12,2:15:36.45:36,0,124	0/0:24,0:25:18.77:0,19,295	0/0:25,1:32:17.06:0,17,415	1/1:10,7:18:28.58:179,29,0	1/1:5,2:9:10.85:52,11,0	0/1:9,8:23:40.93:104,0,41	0/0:9,0:11:0.19:0,0,84	0/0:4,0:6:5.11:0,5,70	0/0:13,2:18:2.71:0,3,205	0/1:8,3:10:12.50:50,0,13	1/1:10,9:20:30.06:171,30,0	1/1:8,8:17:30.50:183,30,0	1/1:9,6:16:28.60:179,29,0
chr10	56000978	.	TA	T	4644.04	PASS	AB=0.941;AC=33;AF=0.688;AN=48;BaseQRankSum=7.876;DP=421;FS=5.557;HRun=9;HaplotypeScore=50.9242;InbreedingCoeff=0.7269;MQ=61.13;MQ0=6;MQRankSum=-4.245;QD=17.07;ReadPosRankSum=2.653;VQSLOD=4.9040;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:78.23:0,78,899	0/0:4,0:4:9.03:0,9,104	0/1:14,0:11:16.83:17,0,123	0/0:12,0:13:9.06:0,9,110	0/0:33,0:32:96.21:0,96,1078	1/1:4,6:6:6:54,6,0	1/1:2,5:3:2.99:27,3,0	0/0:24,0:20:60.18:0,60,692	1/1:1,11:11:30.02:275,30,0	1/1:2,27:21:60.03:549,60,0	1/1:1,23:20:47.91:439,48,0	1/1:1,8:4:3:27,3,0	0/0:21,0:21:45.13:0,45,519	0/0:19,0:19:51.15:0,51,586	1/1:3,21:21:54.03:494,54,0	1/1:1,8:3:3:27,3,0	./.	./.	1/1:4,15:17:47.98:430,48,0	1/1:3,21:24:66.03:603,66,0	1/1:3,2:5:9:82,9,0	./.	1/1:0,3:1:3:27,3,0	./.	1/1:2,27:27:72.04:659,72,0	1/1:5,14:14:36.02:330,36,0	1/1:3,23:23:57.03:521,57,0	1/1:4,3:7:8.94:82,9,0
chr10	56001069	.	AT	A	2629.83	PASS	AC=34;AF=0.739;AN=46;BaseQRankSum=9.903;DP=382;FS=1.125;HRun=6;HaplotypeScore=31.2872;InbreedingCoeff=0.7593;MQ=41.83;MQ0=29;MQRankSum=-11.198;QD=11.64;ReadPosRankSum=1.224;VQSLOD=0.5225;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:60.20:0,60,787	1/1:0,12:6:9.02:97,9,0	0/0:5,0:4:12.04:0,12,146	0/0:4,0:4:11.40:0,11,126	0/0:41,0:41:95.96:0,96,1209	1/1:1,13:6:3.01:32,3,0	1/1:1,2:1:3.01:32,3,0	1/1:2,9:5:15.04:160,15,0	1/1:0,7:3:3.01:32,3,0	1/1:1,17:17:48.07:501,48,0	1/1:1,20:14:33.08:353,33,0	./.	0/0:28,0:28:81.21:0,81,1034	0/0:15,12:18:39.13:0,39,510	./.	./.	./.	1/1:0,6:2:3.01:32,3,0	1/1:4,6:5:9:86,9,0	1/1:0,32:19:33.08:354,33,0	1/1:1,2:3:3.01:32,3,0	1/1:2,9:9:18.04:193,18,0	1/1:0,11:9:18.04:193,18,0	./.	1/1:4,16:17:32.99:328,33,0	1/1:4,19:9:12.03:129,12,0	1/1:2,20:14:18:180,18,0	1/1:0,2:2:6.02:64,6,0
chr10	56001763	.	TCCTTTCAG	T	1711.75	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.673;DP=787;FS=6.957;HRun=0;HaplotypeScore=167.6219;InbreedingCoeff=0.9058;MQ=54.73;MQ0=11;MQRankSum=-4.979;QD=55.22;ReadPosRankSum=-2.528;VQSLOD=2.1202;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:81.26:0,81,3522	1/1:0,9:5:12.04:363,12,0	0/0:13,0:3:6.02:0,6,200	0/0:20,0:4:9.03:0,9,185	0/0:30,0:30:66.23:0,66,3053	0/0:29,0:28:78.25:0,78,3325	0/0:25,0:25:75.26:0,75,3130	1/1:3,19:20:57.17:1465,57,0	0/0:25,0:24:72.25:0,72,3200	0/0:28,0:28:84.29:0,84,3886	0/0:30,0:26:63.20:0,63,2684	0/0:29,0:29:87.30:0,87,3886	0/0:26,0:26:69.24:0,69,3193	0/0:28,0:28:84.29:0,84,3778	0/0:30,0:30:90.31:0,90,4087	0/0:25,0:25:75.26:0,75,3349	0/0:31,0:31:90.31:0,90,4001	0/0:46,0:45:99:0,129,5709	0/0:26,0:19:57.15:0,57,2370	0/0:45,0:40:99:0,120,5164	0/0:24,0:24:72.23:0,72,3181	0/0:37,0:37:78.27:0,78,3446	0/0:34,0:31:72.25:0,72,3125	0/0:31,0:31:90.31:0,90,4141	0/0:22,0:19:45.15:0,45,2083	0/0:39,0:39:99:0,117,5019	0/0:32,0:31:93.30:0,93,4129	0/0:22,0:21:51.18:0,51,2201
chr10	56005991	.	C	CTT	3665.71	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-4.411;DP=557;FS=5.425;HRun=11;HaplotypeScore=77.1127;InbreedingCoeff=0.9540;MQ=73.24;MQ0=2;MQRankSum=-1.060;QD=21.19;ReadPosRankSum=0.278;VQSLOD=3.1043;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:70.85:0,71,668	0/0:12,0:12:14.13:0,14,50	0/0:39,0:16:7.10:0,7,88	0/0:24,0:14:9.94:0,10,42	0/0:33,0:33:77.90:0,78,738	1/1:2,5:7:12.04:174,12,0	1/1:1,12:14:18.06:261,18,0	0/0:25,0:25:12.42:0,12,95	0/0:5,0:5:12:0,12,116	0/0:22,0:22:38.06:0,38,427	0/0:18,0:18:35.92:0,36,349	1/1:4,6:12:14.54:182,15,0	0/0:13,0:13:33:0,33,313	0/0:17,0:19:29.89:0,30,340	0/0:17,0:17:35.70:0,36,326	1/1:5,13:19:36.12:507,36,0	1/1:10,25:37:61.67:800,62,0	1/1:9,20:29:49.41:650,49,0	0/0:18,0:18:32.98:0,33,320	0/0:16,0:17:31.22:0,31,344	0/0:14,0:16:20.95:0,21,253	1/1:4,14:19:36.48:481,36,0	1/1:5,10:15:20.61:247,21,0	1/1:4,13:19:29.07:365,29,0	0/0:20,0:20:38.97:0,39,378	0/0:25,0:27:38.83:0,39,477	0/0:21,0:22:44.62:0,45,455	0/0:7,0:7:15.01:0,15,145
chr10	56005997	.	T	TC	1199.93	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-5.086;DP=541;FS=1.210;HRun=0;HaplotypeScore=74.6684;InbreedingCoeff=0.9024;MQ=72.32;MQ0=1;MQRankSum=0.405;QD=30.77;ReadPosRankSum=-0.189;VQSLOD=3.3144;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:81.23:0,81,1065	1/1:0,13:13:33.11:440,33,0	0/0:33,0:13:8.11:0,8,162	0/0:21,0:12:7.31:0,7,49	0/0:31,0:31:90.19:0,90,1161	0/0:8,0:8:20.62:0,21,149	0/0:14,0:14:20.55:0,21,135	1/1:2,24:26:49.40:881,49,0	0/0:6,0:6:15.04:0,15,194	0/0:26,0:26:68.23:0,68,847	0/0:19,0:19:51.14:0,51,640	0/0:12,0:12:21.99:0,22,159	0/0:13,0:13:39.11:0,39,513	0/0:20,0:20:49.55:0,50,632	0/0:17,0:17:51.08:0,51,614	0/0:16,0:16:41.60:0,42,291	0/0:39,0:38:66.44:0,66,486	0/0:31,0:30:64.15:0,64,408	0/0:14,0:14:39.08:0,39,506	0/0:17,0:17:42.89:0,43,574	0/0:15,0:15:26.33:0,26,396	0/0:20,0:20:45.87:0,46,297	0/0:13,0:13:23.51:0,24,145	0/0:16,0:16:18.92:0,19,136	0/0:21,0:21:60.12:0,60,730	0/0:26,0:26:69.03:0,69,894	0/0:22,0:21:57.87:0,58,742	0/0:5,0:5:15.05:0,15,209
chr10	56007037	.	T	TTA	1704.74	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-8.088;DP=617;FS=1.404;HRun=0;HaplotypeScore=71.1386;InbreedingCoeff=0.9957;MQ=80.95;MQ0=0;MQRankSum=-3.610;QD=46.07;ReadPosRankSum=-3.528;VQSLOD=3.8946;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:39.11:0,39,553	1/1:1,6:8:18.06:337,18,0	0/0:16,0:16:45.15:0,45,659	0/0:25,0:25:69.70:0,70,991	0/0:29,0:29:87.28:0,87,1257	0/0:27,0:27:78.21:0,78,1087	0/0:18,0:18:51.17:0,51,751	1/1:1,27:29:84.23:1487,84,0	0/0:28,0:28:84.27:0,84,1218	0/0:24,0:24:69.22:0,69,995	0/0:20,0:20:54.18:0,54,795	0/0:21,0:21:57.19:0,57,836	0/0:21,0:21:63.21:0,63,925	0/0:22,0:22:63.21:0,63,928	0/0:30,0:30:90.30:0,90,1326	0/0:27,0:27:78.26:0,78,1149	0/0:21,0:21:57.19:0,57,835	0/0:22,0:22:60.20:0,60,883	0/0:15,0:15:42.14:0,42,615	0/0:28,0:28:78.25:0,78,1131	0/0:12,0:12:36.12:0,36,525	0/0:33,0:33:90.30:0,90,1320	0/0:24,0:24:69.23:0,69,1016	0/0:15,0:15:45.12:0,45,620	0/0:22,0:22:63.21:0,63,925	0/0:24,0:24:69.23:0,69,1014	0/0:30,0:30:87.28:0,87,1261	0/0:13,0:13:39.13:0,39,574
chr10	56008703	.	CG	C	2043.17	PASS	AB=0.924;AC=24;AF=0.429;AN=56;BaseQRankSum=-1.323;DP=396;FS=32.906;HRun=11;HaplotypeScore=62.7947;InbreedingCoeff=0.4595;MQ=77.30;MQ0=1;MQRankSum=0.998;QD=7.86;ReadPosRankSum=8.220;VQSLOD=-0.5557;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:9.29:0,9,250	0/0:2,0:2:3:0,3,27	0/1:8,0:9:1.38:1,0,103	0/1:20,0:18:21.24:21,0,38	0/0:9,0:9:11.99:0,12,105	1/1:8,10:17:32.61:265,33,0	0/1:13,12:26:23.11:226,0,23	0/0:11,0:11:3.47:0,3,26	0/0:12,0:13:8.11:0,8,40	0/0:9,0:9:9.57:0,10,61	0/0:4,0:4:5.93:0,6,49	1/1:13,4:17:4.88:173,5,0	0/1:11,1:12:0.43:0,0,177	0/1:19,0:19:2.93:3,0,263	0/0:13,0:13:9.50:0,9,51	1/1:10,9:20:23.13:175,23,0	1/1:20,9:31:41.46:374,41,0	1/1:5,13:20:51.05:386,51,0	0/0:7,0:7:9.68:0,10,65	0/0:7,0:8:6.79:0,7,49	0/1:9,1:21:8.63:18,0,9	1/1:3,5:8:20.22:146,20,0	1/1:4,6:10:14.80:122,15,0	1/1:14,8:25:13.03:277,13,0	0/0:5,0:6:11.49:0,11,84	0/0:6,0:15:4.16:0,4,38	0/0:6,0:13:3.01:0,3,31	1/1:4,0:4:5.89:38,6,0
chr10	56009475	.	TTTATTATTA	T	158.05	PASS	AB=0.800;AC=7;AF=0.233;AN=30;BaseQRankSum=3.242;DP=211;FS=2.464;HRun=0;HaplotypeScore=53.1511;InbreedingCoeff=0.3416;MQ=66.81;MQ0=0;MQRankSum=-3.698;QD=3.29;ReadPosRankSum=-0.789;VQSLOD=1.4639;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:9,0:12:2.99:3,0,26	./.	./.	./.	1/1:8,0:9:0.89:2,1,0	0/0:6,0:9:9.03:0,9,164	./.	0/0:37,0:37:12.02:0,12,133	./.	./.	./.	0/0:2,0:2:3.01:0,3,136	0/0:6,0:6:3.01:0,3,49	0/0:4,0:4:3.01:0,3,62	./.	./.	1/1:8,6:14:3.01:81,3,0	1/1:3,10:13:6.02:163,6,0	0/0:3,0:3:3.01:0,3,64	0/0:4,0:4:3.01:0,3,72	./.	./.	./.	./.	0/0:12,0:12:27.09:0,27,1149	0/0:5,0:5:6.02:0,6,267	0/0:5,0:5:9.01:0,9,130	0/0:21,0:23:30.10:0,30,1187
chr10	56009728	.	A	AT	8252.78	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-13.615;DP=573;FS=6.167;HRun=2;HaplotypeScore=52.3663;InbreedingCoeff=0.9898;MQ=85.89;MQ0=0;MQRankSum=-6.118;QD=39.49;ReadPosRankSum=1.639;VQSLOD=5.2272;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,129,1598	0/0:8,0:8:21.07:0,21,260	0/0:25,0:25:45.52:0,46,729	0/0:11,0:11:30.09:0,30,355	0/0:19,0:19:57.17:0,57,692	0/0:15,0:15:45.14:0,45,557	0/0:28,0:28:81.23:0,81,990	0/0:31,0:31:84.20:0,84,992	1/1:1,13:14:39.13:562,39,0	1/1:0,11:11:30.07:410,30,0	1/1:2,9:11:24.08:345,24,0	0/0:21,0:21:63.20:0,63,781	0/0:23,0:23:66.21:0,66,818	0/0:20,0:20:54.17:0,54,669	1/1:2,22:24:66.22:950,66,0	0/0:21,0:21:63.20:0,63,781	0/0:27,0:27:81.25:0,81,1004	0/0:29,0:29:84.21:0,84,1008	1/1:1,20:21:60.20:864,60,0	1/1:0,10:10:27.09:389,27,0	1/1:2,49:51:99:2030,141,0	0/0:9,0:9:27.08:0,27,328	0/0:7,0:7:21.07:0,21,260	0/0:26,0:26:78.22:0,78,951	1/1:0,20:20:60.20:864,60,0	1/1:1,25:26:75.24:1062,75,0	1/1:0,16:16:45.15:648,45,0	1/1:0,5:5:9.03:130,9,0
chr10	56010644	.	GT	G	262.23	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.939;DP=536;FS=11.917;HRun=9;HaplotypeScore=52.4637;InbreedingCoeff=0.8716;MQ=76.34;MQ0=0;MQRankSum=-0.898;QD=18.73;ReadPosRankSum=0.258;VQSLOD=2.7797;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:72.21:0,72,831	0/0:8,0:8:18.05:0,18,208	0/0:26,0:21:35.80:0,36,442	0/0:16,1:15:23.95:0,24,241	0/0:26,0:26:72.21:0,72,831	0/0:18,0:18:51.15:0,51,589	0/0:10,0:10:24.07:0,24,277	0/0:33,0:33:78.22:0,78,893	0/0:14,0:14:36.09:0,36,405	0/0:25,0:25:66.18:0,66,747	0/0:18,0:18:42.12:0,42,484	0/0:13,1:14:14.66:0,15,423	0/0:22,0:22:60.18:0,60,691	1/1:0,14:14:39.02:357,39,0	0/0:10,0:10:27.07:0,27,303	0/0:18,0:18:54.10:0,54,597	0/0:34,0:34:93.26:0,93,1063	0/0:34,0:34:93.27:0,93,1065	0/0:18,0:17:39.12:0,39,450	0/0:27,0:27:72.20:0,72,821	0/0:9,0:9:18.04:0,18,197	0/0:2,0:2:6.01:0,6,62	0/0:9,0:9:27.08:0,27,312	0/0:9,0:9:24.06:0,24,267	0/0:32,0:32:93.28:0,93,1073	0/0:29,0:29:80.05:0,80,905	0/0:19,0:19:54.16:0,54,623	0/0:17,0:17:51.15:0,51,588
chr10	56011156	.	T	TCATATA	4802.49	PASS	AB=1.000;AC=45;AF=0.938;AN=48;BaseQRankSum=-1.249;DP=421;FS=0.000;HRun=0;HaplotypeScore=95.0593;InbreedingCoeff=0.1889;MQ=65.69;MQ0=1;MQRankSum=1.818;QD=14.47;ReadPosRankSum=2.165;VQSLOD=3.8938;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	1/1:6,0:6:3.01:57,3,0	./.	0/1:2,0:2:0:0,0,0	1/1:10,9:19:9.03:289,9,0	1/1:16,0:16:14.97:199,15,0	1/1:10,0:10:2.90:16,3,0	0/0:25,0:25:2.11:0,2,18	1/1:8,3:11:3.01:96,3,0	1/1:8,0:8:12.04:227,12,0	./.	1/1:14,0:14:5.99:50,6,0	1/1:15,0:15:9:100,9,0	1/1:6,3:9:3.01:96,3,0	1/1:12,1:14:3.01:96,3,0	1/1:10,0:10:3:25,3,0	1/1:16,0:16:18.04:302,18,0	1/1:20,0:20:26.90:341,27,0	1/1:17,9:26:27.09:659,27,0	1/1:16,6:22:6.02:192,6,0	1/1:10,0:10:3.01:49,3,0	1/1:15,0:15:6.01:75,6,0	1/1:4,0:4:3:25,3,0	./.	1/1:9,12:21:9.03:289,9,0	1/1:13,8:21:24.06:568,24,0	1/1:10,11:21:9.03:280,9,0	1/1:5,16:22:24.08:771,24,0
chr10	56011200	.	ATG	A	834.05	PASS	AB=0.988;AC=15;AF=0.300;AN=50;BaseQRankSum=-1.667;DP=280;FS=3.821;HRun=0;HaplotypeScore=77.4905;InbreedingCoeff=0.1718;MQ=55.10;MQ0=6;MQRankSum=0.852;QD=6.00;ReadPosRankSum=-6.853;VQSLOD=0.2511;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:24.05:0,24,391	1/1:2,0:2:3:25,3,0	./.	0/0:13,0:5:6.26:0,6,45	0/0:12,0:12:18.03:0,18,278	0/1:9,0:9:1.73:39,0,2	0/1:5,0:5:10.59:13,0,11	1/1:38,0:37:44.86:418,45,0	0/0:7,0:7:15.01:0,15,180	0/1:8,0:8:53.26:53,0,211	./.	0/0:3,0:3:2.50:0,2,9	0/1:2,0:2:18.94:19,0,52	0/0:6,0:6:9.01:0,9,128	0/0:3,0:3:6.02:0,6,105	1/1:3,0:3:3:25,3,0	0/1:25,1:26:46.37:145,0,46	0/1:18,1:19:66.20:115,0,66	0/1:22,0:16:99:104,0,364	0/0:5,0:5:9.03:0,9,153	0/0:4,0:4:3.01:0,3,58	1/1:5,0:5:3:25,3,0	./.	0/0:5,0:5:1.25:0,1,3	0/0:11,0:11:15.05:0,15,258	0/0:10,0:10:26.99:0,27,476	0/0:13,0:13:12.04:0,12,210	0/0:20,0:19:36.59:0,37,620
chr10	56011366	.	C	CAA	2208.34	PASS	AB=0.750;AC=19;AF=0.339;AN=56;BaseQRankSum=0.722;DP=432;FS=0.513;HRun=13;HaplotypeScore=57.8211;InbreedingCoeff=0.9027;MQ=51.11;MQ0=26;MQRankSum=1.350;QD=13.80;ReadPosRankSum=0.580;VQSLOD=2.0561;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:31:33.69:0,34,418	0/0:6,0:7:17.71:0,18,144	0/0:9,0:6:7.76:0,8,45	0/1:4,0:4:0.78:38,0,1	0/0:14,0:14:19.39:0,19,159	1/1:8,4:13:12:132,12,0	1/1:12,14:28:41.53:462,42,0	0/0:29,0:28:37.04:0,37,306	0/0:9,0:9:20.99:0,21,185	0/0:11,0:11:17.82:0,18,149	0/0:15,0:16:29.81:0,30,286	1/1:10,0:13:20:194,20,0	0/0:11,0:11:17.79:0,18,154	0/0:8,0:8:11.90:0,12,106	0/0:5,0:7:11.63:0,12,91	1/1:9,3:12:14.53:159,15,0	1/1:7,16:23:37.93:483,38,0	1/1:11,6:19:30.17:328,30,0	0/0:25,0:23:26.02:0,26,294	0/0:12,0:13:7.98:0,8,136	0/0:14,0:15:29.57:0,30,249	1/1:5,2:10:17.44:158,17,0	1/1:2,6:9:14.44:129,14,0	1/1:6,9:16:26.57:335,27,0	0/0:15,0:16:23.54:0,24,188	0/0:14,0:11:29.98:0,30,260	0/0:12,0:11:26.97:0,27,238	0/0:16,0:12:12.22:0,12,182
chr10	56018641	.	TCACA	T	1119.17	PASS	AB=0.750;AC=17;AF=0.386;AN=44;BaseQRankSum=2.141;DP=533;FS=3.065;HRun=0;HaplotypeScore=92.0121;InbreedingCoeff=0.6726;MQ=73.36;MQ0=10;MQRankSum=0.703;QD=6.29;ReadPosRankSum=0.144;VQSLOD=2.2667;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:31:30.10:0,30,572	1/1:5,0:7:3:28,3,0	./.	./.	0/0:11,0:11:17.82:0,18,271	0/0:13,0:13:8.74:0,9,62	0/0:20,0:20:27.26:0,27,508	./.	0/0:15,0:20:10.98:0,11,49	./.	0/0:7,0:8:2.43:0,2,11	1/1:19,8:27:18.05:278,18,0	0/0:20,0:21:17.77:0,18,280	0/0:15,0:14:12.04:0,12,252	0/0:18,0:18:9.47:0,9,150	1/1:8,1:12:9.02:119,9,0	1/1:24,7:30:6.23:221,6,0	1/1:17,7:24:13.31:228,13,0	./.	0/0:12,0:13:8.75:0,9,105	0/0:34,0:37:11.74:0,12,120	1/1:9,3:12:3.01:46,3,0	1/1:9,2:11:5.69:92,6,0	1/1:32,9:44:15.52:232,16,0	0/0:17,0:21:8.22:0,8,37	0/0:13,0:15:8.43:0,8,51	0/1:6,1:9:15.84:38,0,16	./.
chr10	56019605	.	GA	G	10084.21	PASS	AB=0.966;AC=45;AF=0.804;AN=56;BaseQRankSum=6.148;DP=691;FS=0.388;HRun=11;HaplotypeScore=76.6402;InbreedingCoeff=0.8769;MQ=71.50;MQ0=1;MQRankSum=0.302;QD=18.17;ReadPosRankSum=1.240;VQSLOD=5.8059;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:42:99:0,111,1116	1/1:2,9:11:26.97:222,27,0	0/1:27,1:19:20.26:20,0,100	0/0:21,0:12:10.30:0,10,127	0/0:29,2:31:33.09:0,33,720	1/1:1,19:21:56.92:465,57,0	1/1:9,17:26:44.93:369,45,0	1/1:1,23:25:70.92:567,71,0	1/1:5,17:23:49.97:400,50,0	1/1:4,11:15:29.96:246,30,0	1/1:3,15:19:46.98:375,47,0	1/1:4,19:23:50.93:419,51,0	0/0:23,0:23:54.12:0,54,567	0/0:18,1:19:32.74:0,33,529	1/1:5,21:26:56.92:468,57,0	1/1:2,22:24:50.94:419,51,0	1/1:5,25:30:39.92:534,40,0	1/1:0,21:23:61.95:498,62,0	1/1:5,21:26:62.88:515,63,0	1/1:2,25:28:73.93:597,74,0	1/1:6,22:28:65.91:542,66,0	1/1:4,27:31:74.90:616,75,0	1/1:2,18:21:43.99:351,44,0	1/1:5,28:33:71.66:591,72,0	1/1:2,27:29:74.91:616,75,0	1/1:3,18:22:26.99:417,27,0	1/1:6,23:29:59.77:492,60,0	1/1:0,14:14:41.95:345,42,0
chr10	56019911	.	A	AT	748.07	PASS	AB=0.963;AC=5;AF=0.089;AN=56;BaseQRankSum=-6.786;DP=623;FS=1.527;HRun=9;HaplotypeScore=65.7058;InbreedingCoeff=0.8077;MQ=73.66;MQ0=2;MQRankSum=0.045;QD=12.26;ReadPosRankSum=-2.451;VQSLOD=2.7467;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:48:99:0,124,1053	1/1:2,5:7:15.04:164,15,0	0/0:21,0:17:31.79:0,32,255	0/0:16,0:15:31.34:0,31,220	0/1:25,1:26:6.19:6,0,405	0/0:27,0:27:70.90:0,71,608	0/0:29,0:29:71.94:0,72,622	1/1:6,21:28:65.99:701,66,0	0/0:27,0:27:59.97:0,60,521	0/0:25,0:25:62.95:0,63,545	0/0:20,0:20:44.97:0,45,387	0/0:25,0:25:68.94:0,69,588	0/0:25,0:25:65.97:0,66,573	0/0:18,0:18:47.97:0,48,415	0/0:23,0:23:59.98:0,60,520	0/0:13,0:13:35.98:0,36,309	0/0:30,0:30:86.97:0,87,755	0/0:26,0:26:74.97:0,75,650	0/0:17,0:17:35.97:0,36,312	0/0:23,0:23:53.96:0,54,469	0/0:23,0:23:65.98:0,66,572	0/0:26,0:26:62.97:0,63,547	0/0:11,0:11:29.99:0,30,260	0/0:16,0:16:41.99:0,42,364	0/0:20,0:20:56.99:0,57,495	0/0:19,0:19:50.99:0,51,442	0/0:23,0:22:62.95:0,63,538	0/0:11,0:11:29.99:0,30,260
chr10	56022419	.	CCT	C	18488.01	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=9.852;DP=697;FS=4.469;HRun=0;HaplotypeScore=94.2596;InbreedingCoeff=0.9993;MQ=86.67;MQ0=1;MQRankSum=-4.747;QD=35.02;ReadPosRankSum=3.370;VQSLOD=7.3384;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,108,1894	1/1:1,8:9:24.08:330,24,0	0/0:32,0:32:84.21:0,84,1314	0/0:23,0:23:54.96:0,55,849	0/0:23,0:23:66.20:0,66,1080	1/1:0,21:21:54.18:742,54,0	1/1:4,24:28:66.22:907,66,0	1/1:7,23:30:69.17:880,69,0	1/1:0,31:31:90.30:1237,90,0	1/1:3,17:20:51.17:701,51,0	1/1:2,16:18:42.14:577,42,0	1/1:1,23:24:63.21:866,63,0	0/0:28,0:28:84.29:0,84,1475	0/0:27,0:27:81.28:0,81,1420	1/1:0,41:41:99:1526,111,0	1/1:0,28:28:81.27:1113,81,0	1/1:1,25:25:57.19:783,57,0	1/1:0,14:14:36.12:495,36,0	1/1:2,21:23:60.19:811,60,0	1/1:2,17:19:51.13:679,51,0	1/1:2,48:50:99:1771,129,0	1/1:2,15:17:45.15:615,45,0	1/1:1,15:16:36.12:495,36,0	1/1:1,29:30:81.27:1113,81,0	1/1:0,10:10:27.09:371,27,0	1/1:3,21:24:63.18:848,63,0	1/1:2,19:21:45.11:597,45,0	1/1:2,26:28:75.25:1031,75,0
chr10	56023460	.	GTT	G	6372.57	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-5.146;DP=628;FS=12.012;HRun=12;HaplotypeScore=97.6657;InbreedingCoeff=0.9629;MQ=71.35;MQ0=2;MQRankSum=1.485;QD=22.36;ReadPosRankSum=0.039;VQSLOD=2.9704;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:31:72.20:0,72,1009	1/1:0,9:9:27.06:273,27,0	0/0:21,1:13:3.25:0,3,168	0/0:23,0:14:16.43:0,16,157	0/0:31,0:32:78.59:0,79,1056	0/0:5,1:27:26.33:0,26,227	0/0:7,0:16:23.46:0,23,112	1/1:4,28:34:23.16:694,23,0	1/1:2,15:17:39.07:397,39,0	1/1:5,28:34:86.91:866,87,0	1/1:5,26:31:51.05:569,51,0	0/0:3,0:18:35.27:0,35,139	0/0:27,0:27:65.71:0,66,949	0/0:24,0:24:63.14:0,63,893	1/1:3,17:21:50.85:499,51,0	0/0:4,0:16:27.45:0,27,97	0/0:9,1:32:31.93:0,32,294	0/0:3,1:21:12.42:0,12,110	1/1:6,23:30:73.11:710,73,0	1/1:6,14:20:36.05:358,36,0	1/1:2,19:21:45.07:458,45,0	0/0:1,1:19:9.66:0,10,99	0/0:5,0:24:43.45:0,43,221	0/0:1,0:11:25.45:0,25,103	1/1:3,17:20:42.06:427,42,0	1/1:3,19:21:51.08:511,51,0	1/1:2,14:16:33.07:335,33,0	1/1:0,10:10:27.06:275,27,0
chr10	56023775	.	G	GTCTCTG	1369.70	PASS	AB=0.805;AC=21;AF=0.375;AN=56;BaseQRankSum=7.652;DP=815;FS=3.680;HRun=0;HaplotypeScore=229.0144;InbreedingCoeff=-0.1157;MQ=52.92;MQ0=27;MQRankSum=1.771;QD=2.76;ReadPosRankSum=4.044;VQSLOD=1.9752;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:37:66.73:0,67,1326	1/1:11,0:11:3:94,3,0	0/0:42,0:24:60.10:0,60,1036	0/0:62,0:36:84.28:0,84,1356	0/0:30,0:30:78.19:0,78,1449	1/1:4,1:30:3.01:71,3,0	0/0:23,0:24:1.31:0,1,72	0/1:43,0:42:95.54:150,0,96	0/0:1,0:27:4.38:0,4,15	0/1:34,0:37:56.47:231,0,56	0/0:3,0:27:11.51:0,12,40	0/1:2,0:34:0:2,0,0	0/0:24,0:24:72.21:0,72,1478	0/0:24,0:24:63.16:0,63,1244	0/0:0,0:15:6.33:0,6,21	0/1:28,0:28:32.25:55,0,32	0/1:19,0:20:32.16:32,0,105	0/1:28,0:29:99:139,0,102	0/1:3,0:30:80.38:92,0,80	0/1:6,0:21:37.61:54,0,38	0/1:22,0:22:0.15:37,0,0	0/1:27,0:29:49.83:91,0,50	0/1:18,0:19:26.77:45,0,27	0/1:35,0:37:59.36:113,0,59	0/1:3,0:21:0.04:1,0,0	0/1:3,0:36:86.50:129,0,86	1/1:2,0:25:12.50:152,13,0	0/1:12,0:11:38.97:39,0,42
chr10	56023826	.	TCTCACACACACACA	T	1160.70	PASS	AB=1.000;AC=8;AF=0.154;AN=52;BaseQRankSum=-0.135;DP=663;FS=2.672;HRun=0;HaplotypeScore=248.2161;InbreedingCoeff=0.1985;MQ=37.67;MQ0=49;MQRankSum=-1.939;QD=5.53;ReadPosRankSum=0.172;VQSLOD=2.4735;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:35,0:34:0.16:0,0,1515	0/0:9,0:10:18.03:0,18,289	./.	./.	0/1:30,0:27:6.16:6,0,1812	0/1:24,0:24:26.33:131,0,26	0/1:36,0:27:7.52:62,0,8	0/0:24,0:22:15.59:0,16,249	0/0:24,0:21:30:0,30,1396	0/0:25,0:22:55.05:0,55,1616	0/0:23,0:22:7.58:0,8,606	1/1:38,0:34:18.94:497,19,0	0/0:25,0:22:28.97:0,29,1217	0/0:25,0:24:43.05:0,43,1189	0/0:18,0:17:20.80:0,21,974	0/0:13,13:23:1.06:0,1,3	0/1:22,0:20:3.71:273,0,4	0/1:25,0:23:99:319,0,197	0/0:13,0:13:32.97:0,33,1053	0/0:24,0:21:26.33:0,26,1123	0/0:17,0:14:9.01:0,9,295	0/0:30,0:32:5.99:0,6,48	0/0:25,0:24:3.62:0,4,13	0/0:43,0:41:6.12:0,6,33	0/0:26,0:25:11.65:0,12,634	0/0:36,0:33:83.44:0,83,3210	0/0:20,0:20:36.36:0,36,1168	0/0:11,0:9:15.61:0,16,533
chr10	56023828	.	TCACACACACA	T	1344.24	PASS	AB=0.735;AC=13;AF=0.260;AN=50;BaseQRankSum=0.722;DP=654;FS=8.664;HRun=0;HaplotypeScore=217.4034;InbreedingCoeff=0.6347;MQ=37.79;MQ0=46;MQRankSum=-3.135;QD=6.65;ReadPosRankSum=-0.069;VQSLOD=1.5057;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:36.03:0,36,1111	0/0:10,0:10:14.90:0,15,126	./.	./.	0/0:33,0:29:37.67:0,38,1447	1/1:20,4:24:5.50:178,6,0	1/1:20,10:24:2.47:85,2,0	0/0:24,0:22:9.03:0,9,157	0/0:24,0:21:29.92:0,30,1096	0/0:25,0:22:30.99:0,31,1147	0/0:23,0:22:10.33:0,10,506	1/1:30,5:33:17.15:526,17,0	0/0:24,0:21:24.08:0,24,857	0/0:27,0:26:27.30:0,27,945	0/0:20,0:19:17.62:0,18,791	1/1:25,0:23:0.47:1,0,0	1/1:8,2:15:9.71:269,10,0	0/1:16,9:23:99:423,0,190	0/0:17,0:17:27.10:0,27,944	0/0:25,0:22:21.03:0,21,902	0/0:16,0:13:6.01:0,6,226	./.	0/0:18,1:24:0.93:0,1,1	1/1:23,18:38:0.13:0,0,0	0/0:25,0:24:11.67:0,12,512	0/0:36,0:34:72.25:0,72,2550	0/0:21,0:21:22.84:0,23,843	0/0:10,0:8:9.03:0,9,397
chr10	56025343	.	GA	G	4495.57	PASS	AB=0.988;AC=24;AF=0.429;AN=56;BaseQRankSum=-1.710;DP=651;FS=3.584;HRun=10;HaplotypeScore=88.9451;InbreedingCoeff=0.8337;MQ=61.94;MQ0=16;MQRankSum=-1.073;QD=13.18;ReadPosRankSum=1.432;VQSLOD=5.0824;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:41:99:0,114,1260	1/1:1,13:14:35.99:313,36,0	0/1:37,1:12:0.29:0,0,119	0/1:29,0:11:11.10:11,0,69	0/0:21,0:21:42.10:0,42,523	1/1:4,9:13:6.63:142,7,0	1/1:3,20:21:50.99:443,51,0	1/1:11,22:29:62.96:545,63,0	0/0:4,0:22:45.59:0,46,236	0/0:5,0:24:47.70:0,48,235	0/0:2,0:14:34.37:0,34,187	1/1:2,16:18:14.81:357,15,0	0/0:23,0:25:28.50:0,29,510	0/0:15,0:15:39.09:0,39,422	0/0:2,0:17:42.94:0,43,238	1/1:2,21:23:44.69:390,45,0	1/1:6,33:38:2.64:481,3,0	1/1:5,25:29:59.98:521,60,0	0/0:4,0:19:40.18:0,40,217	0/0:3,0:23:51.81:0,52,260	0/0:0,0:14:31.25:0,31,156	1/1:2,18:20:14.81:357,15,0	1/1:3,17:18:38.99:338,39,0	1/1:4,35:38:68.97:598,69,0	0/0:4,0:17:31.57:0,32,187	0/0:5,0:28:55.27:0,55,271	0/0:1,0:23:56.82:0,57,283	0/0:0,0:5:5.68:0,6,28
chr10	56025987	.	TAGTGAAGGGTGTCA	T	1332.04	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.757;DP=683;FS=6.170;HRun=0;HaplotypeScore=256.6569;InbreedingCoeff=0.9656;MQ=81.01;MQ0=0;MQRankSum=-4.912;QD=88.80;ReadPosRankSum=0.744;VQSLOD=2.7701;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,120,7600	0/0:7,0:7:18.06:0,18,1278	0/0:15,0:15:44.94:0,45,2394	0/0:22,0:22:55.86:0,56,3315	0/0:7,0:7:21.05:0,21,863	0/0:14,0:14:36.12:0,36,2143	0/0:34,0:34:99:0,102,6322	0/0:32,0:32:93.31:0,93,5792	0/0:38,0:38:99:0,111,7403	0/0:18,0:18:54.19:0,54,3806	0/0:11,0:11:33.11:0,33,2234	0/0:39,0:39:99:0,117,7901	1/1:2,13:15:33.11:1427,33,0	0/0:41,0:41:99:0,123,8208	0/0:15,0:15:45.15:0,45,3110	0/0:23,0:23:63.22:0,63,4275	0/0:36,0:36:99:0,108,7483	0/0:45,0:45:99:0,132,8048	0/0:19,0:19:57.20:0,57,3287	0/0:5,0:5:15.05:0,15,1069	0/0:75,0:75:99:0,217,14542	0/0:10,0:10:24.08:0,24,1659	0/0:9,0:9:27.08:0,27,1602	0/0:40,0:40:99:0,120,8078	0/0:13,0:13:39.13:0,39,2649	0/0:27,0:27:81.28:0,81,5497	0/0:26,0:26:78.27:0,78,5375	0/0:7,0:7:21.07:0,21,1488
chr10	56028785	.	T	TCA	3700.87	PASS	AB=0.772;AC=33;AF=0.611;AN=54;BaseQRankSum=-1.782;DP=587;FS=10.447;HRun=0;HaplotypeScore=154.5057;InbreedingCoeff=0.4424;MQ=51.84;MQ0=5;MQRankSum=-0.059;QD=8.98;ReadPosRankSum=-1.104;VQSLOD=2.5510;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:26:28.21:0,28,267	0/0:5,0:5:12.03:0,12,135	0/0:15,0:12:8.98:0,9,81	./.	0/0:24,0:24:8.23:0,8,74	1/1:10,16:27:21.07:318,21,0	0/1:13,10:23:81.16:244,0,81	1/1:27,0:25:23.83:222,24,0	1/1:15,0:17:11.84:89,12,0	1/1:21,0:21:20.03:145,20,0	1/1:15,0:15:5.96:46,6,0	1/1:8,12:21:23.99:335,24,0	0/0:23,0:23:23.33:0,23,253	0/0:15,0:16:3.01:0,3,33	0/0:18,0:18:0:0,0,0	0/0:17,0:23:22.26:0,22,106	0/1:10,4:15:23.76:224,0,24	1/1:4,10:14:21.07:320,21,0	1/1:12,0:15:15.47:143,15,0	1/1:17,0:19:8.97:72,9,0	1/1:21,0:20:3.94:27,4,0	0/1:16,27:47:6.55:337,0,7	0/1:21,9:30:64.19:338,0,64	1/1:12,17:29:33.11:502,33,0	1/1:16,0:18:3.48:45,3,0	0/1:26,0:24:11.89:139,0,12	1/1:15,0:16:8.98:72,9,0	1/1:10,0:9:6.02:82,6,0
chr10	56028872	.	CA	C	1817.92	PASS	AB=0.825;AC=11;AF=0.196;AN=56;BaseQRankSum=12.428;DP=834;FS=118.958;HRun=1;HaplotypeScore=389.2391;InbreedingCoeff=-0.2429;MQ=42.36;MQ0=17;MQRankSum=-10.835;QD=4.95;ReadPosRankSum=2.206;VQSLOD=0.4946;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:31.81:0,32,523	0/1:12,5:17:99:165,0,339	0/0:57,0:33:56.61:0,57,1285	0/0:40,0:26:71.56:0,72,1042	0/1:30,17:48:99:414,0,573	0/0:25,1:26:48.79:0,49,713	0/0:20,0:19:29.38:0,29,478	0/0:39,0:39:99:0,117,1692	0/0:24,0:24:59.99:0,60,922	0/1:22,8:30:99:237,0,866	0/1:25,8:33:99:107,0,542	0/1:22,2:23:33.98:34,0,615	0/1:24,3:25:49.21:49,0,744	0/0:19,0:18:25.26:0,25,513	0/0:23,1:21:39.13:0,39,623	0/0:31,0:30:54.67:0,55,961	0/0:16,0:17:42.03:0,42,602	0/0:12,0:12:36.08:0,36,539	0/0:14,0:12:30.10:0,30,480	0/1:20,13:34:99:251,0,708	0/0:39,0:38:83.66:0,84,1341	0/1:50,11:59:99:204,0,906	0/1:38,6:44:99:120,0,1029	0/0:20,0:20:29.36:0,29,442	0/1:21,11:34:99:373,0,434	0/0:36,1:36:63.19:0,63,1514	0/0:27,0:26:56.11:0,56,889	0/1:13,1:13:11.79:12,0,401
chr10	56028904	.	CAT	C	667.80	PASS	AB=0.841;AC=12;AF=0.214;AN=56;BaseQRankSum=8.213;DP=674;FS=26.293;HRun=0;HaplotypeScore=366.2540;InbreedingCoeff=-0.2651;MQ=41.71;MQ0=15;MQRankSum=-5.968;QD=1.96;ReadPosRankSum=1.647;VQSLOD=0.7138;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:9.74:0,10,246	0/1:10,6:16:70.57:71,0,293	0/0:22,0:17:30.08:0,30,516	0/0:21,0:14:36.68:0,37,462	0/1:26,12:38:93.33:93,0,231	0/0:20,1:21:23.25:0,23,448	0/0:17,0:16:24.97:0,25,420	0/0:37,1:37:31.77:0,32,1081	0/0:19,2:21:21.36:0,21,428	0/1:23,7:30:99:259,0,559	0/0:18,10:28:16.32:0,16,339	0/1:20,4:22:25.31:25,0,327	0/1:21,1:20:0.89:1,0,343	0/0:17,0:17:25.44:0,25,401	0/0:18,2:17:35.80:0,36,620	0/0:23,3:25:35.85:0,36,589	0/1:14,0:14:28.98:29,0,138	0/0:6,0:6:15.05:0,15,271	0/0:9,0:8:17.06:0,17,393	0/1:19,12:31:28.70:29,0,312	0/0:27,0:26:48.04:0,48,713	0/1:40,15:53:63.15:63,0,631	0/1:36,6:41:51.96:52,0,383	0/0:18,0:18:20.99:0,21,326	0/1:23,8:31:99:144,0,211	0/1:27,3:30:22.02:22,0,831	0/0:22,1:22:38.28:0,38,487	0/1:7,1:8:27.27:27,0,256
chr10	56048048	.	T	TA	2574.10	PASS	AB=0.575;AC=15;AF=0.268;AN=56;BaseQRankSum=-10.307;DP=520;FS=3.736;HRun=11;HaplotypeScore=53.5055;InbreedingCoeff=0.6995;MQ=73.50;MQ0=2;MQRankSum=-1.727;QD=17.88;ReadPosRankSum=1.405;VQSLOD=4.8030;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:83.66:0,84,650	0/0:11,0:11:23.86:0,24,182	0/0:27,0:16:4:0,4,112	0/0:24,0:15:11:0,11,119	0/0:27,0:27:56.49:0,56,437	1/1:3,13:16:30.06:305,30,0	1/1:3,11:15:26.21:299,26,0	0/0:31,1:33:52.25:0,52,572	0/0:14,0:15:43.88:0,44,330	0/0:20,0:21:47.49:0,47,360	0/0:13,0:13:38.85:0,39,302	1/1:3,12:15:21.61:373,22,0	0/0:6,0:7:10.01:0,10,92	0/0:9,0:9:17.90:0,18,139	0/0:13,0:15:33.94:0,34,242	1/1:0,11:11:30.06:305,30,0	0/1:5,16:21:24.62:320,0,25	0/1:4,12:15:4.25:323,0,4	0/0:25,0:25:52.30:0,52,397	0/0:21,0:21:56.76:0,57,439	0/0:14,0:14:35.86:0,36,279	1/1:4,12:16:6.82:251,7,0	1/1:3,14:17:36.03:355,36,0	0/1:4,12:17:57.71:233,0,58	0/0:15,0:15:41.83:0,42,323	0/0:25,0:26:61.79:0,62,470	0/0:22,0:23:55.82:0,56,424	0/0:19,0:19:35.82:0,36,279
chr10	56050377	.	A	AC	448.40	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=-1.571;DP=624;FS=0.678;HRun=0;HaplotypeScore=88.0765;InbreedingCoeff=0.6515;MQ=60.39;MQ0=12;MQRankSum=-2.629;QD=12.46;ReadPosRankSum=1.625;VQSLOD=4.4614;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,129,1281	0/0:11,0:10:27:0,27,255	0/0:62,0:12:18.84:0,19,131	0/0:36,0:11:15.70:0,16,122	0/0:24,0:24:64.61:0,65,604	0/0:15,0:15:37.39:0,37,272	0/0:12,0:12:15.20:0,15,126	0/0:44,0:44:99:0,103,846	0/1:15,0:14:1.96:2,0,14	1/1:2,19:20:56.63:543,57,0	0/0:16,0:16:14.15:0,14,120	0/0:13,0:12:17.93:0,18,148	0/0:17,0:16:37.02:0,37,315	0/0:15,0:14:34.09:0,34,276	0/0:20,0:19:10.67:0,11,65	0/0:19,0:19:12.40:0,12,70	0/0:24,0:24:53.69:0,54,353	0/0:25,0:24:58.44:0,58,397	0/0:31,0:29:69.07:0,69,533	0/0:12,0:12:18.86:0,19,209	0/0:21,0:20:33.51:0,34,198	0/0:5,0:5:12.26:0,12,86	0/0:13,0:13:21.69:0,22,149	0/0:24,0:23:17.12:0,17,113	0/0:21,0:20:20.56:0,21,194	0/0:20,0:20:13.57:0,14,221	0/0:26,0:25:51.74:0,52,388	0/0:16,0:16:22.58:0,23,186
chr10	56050571	.	AGTGT	A	4351.13	PASS	AB=0.766;AC=18;AF=0.321;AN=56;BaseQRankSum=2.829;DP=632;FS=9.398;HRun=0;HaplotypeScore=115.1203;InbreedingCoeff=0.5936;MQ=61.72;MQ0=12;MQRankSum=0.222;QD=16.86;ReadPosRankSum=3.958;VQSLOD=3.6690;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:36:56.38:0,56,1123	0/0:8,0:10:20.81:0,21,414	0/0:27,0:15:12.04:0,12,220	0/0:33,0:22:7.58:0,8,113	0/1:19,2:22:20.80:21,0,458	1/1:12,9:20:15.05:238,15,0	1/1:7,13:21:39.13:599,39,0	0/0:26,0:25:15.05:0,15,301	0/0:11,0:30:30.10:0,30,507	0/0:11,0:17:36.11:0,36,688	0/0:14,0:14:9.03:0,9,175	1/1:8,12:21:30.10:476,30,0	0/0:17,0:20:38.72:0,39,773	0/1:27,2:30:18.41:18,0,1054	0/0:13,0:26:15.05:0,15,261	0/1:18,23:42:21.51:794,0,22	1/1:7,14:22:45.15:695,45,0	1/1:8,13:21:39.13:595,39,0	0/0:16,0:16:15.05:0,15,275	0/0:10,0:14:12.03:0,12,198	0/0:29,0:46:5.99:0,6,50	1/1:9,6:14:9.03:143,9,0	0/1:8,9:19:41.53:359,0,42	1/1:10,11:22:27.09:412,27,0	0/0:5,0:14:12.04:0,12,184	0/0:17,0:20:33.11:0,33,677	0/0:4,0:7:9.03:0,9,150	0/0:7,0:12:9.03:0,9,172
chr10	56051181	.	G	GTGTGATGCTTAGATACTCTTGGGTGT	1545.38	PASS	AB=0.778;AC=13;AF=0.929;AN=14;BaseQRankSum=-1.267;DP=22;FS=3.310;HRun=0;HaplotypeScore=44.0101;MQ=192.69;MQ0=0;MQRankSum=0.075;QD=81.34;ReadPosRankSum=-0.373;VQSLOD=1.9264;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,0:1:3:25,3,0	./.	1/1:5,0:7:1.20:736,1,0	0/1:5,1:7:25.86:641,0,26	./.	./.	./.	./.	./.	./.	./.	1/1:1,0:1:3.01:50,3,0	1/1:1,0:1:3.01:50,3,0	./.	./.	./.	1/1:1,0:1:2.98:22,3,0	./.	1/1:1,0:1:3.01:96,3,0	./.	./.	./.	./.	./.	./.	./.	./.	./.
chr10	56054244	.	CTGTGTGTGTGTGTGTG	C	2152.06	PASS	AB=1.000;AC=19;AF=0.365;AN=52;BaseQRankSum=2.462;DP=593;FS=8.576;HRun=0;HaplotypeScore=247.4380;InbreedingCoeff=0.6861;MQ=61.27;MQ0=16;MQRankSum=-3.440;QD=11.09;ReadPosRankSum=1.183;VQSLOD=1.2702;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:39.02:0,39,1576	0/0:5,0:7:6.02:0,6,276	./.	./.	0/0:14,0:14:15.05:0,15,649	0/0:27,0:28:21.06:0,21,1013	0/0:21,0:21:12.50:0,12,647	0/0:25,0:24:15.92:0,16,258	1/1:21,1:22:15.36:213,15,0	1/1:20,1:21:11.74:192,12,0	1/1:8,1:9:15:284,15,0	0/0:16,0:16:15.05:0,15,635	0/0:23,0:21:30.10:0,30,1688	0/0:9,0:9:9.03:0,9,370	1/1:16,1:17:17.84:231,18,0	0/0:19,0:20:21.05:0,21,962	0/0:28,0:25:39.05:0,39,1779	0/0:19,0:19:21.07:0,21,1063	0/1:19,0:19:12.98:40,0,13	1/1:13,2:15:12:394,12,0	0/1:27,0:26:14.07:14,0,413	0/0:20,0:21:20.10:0,20,980	0/0:15,0:15:8.97:0,9,612	0/0:21,0:21:11.76:0,12,499	1/1:12,1:13:5.98:152,6,0	1/1:19,2:21:14.92:329,15,0	1/1:22,3:24:20.95:482,21,0	0/1:4,0:4:7.02:13,0,7
chr10	56054305	.	CT	C	11111.64	PASS	AB=0.800;AC=53;AF=0.981;AN=54;BaseQRankSum=0.413;DP=311;FS=0.000;HRun=1;HaplotypeScore=153.3274;InbreedingCoeff=-0.0272;MQ=55.58;MQ0=1;MQRankSum=-1.732;QD=35.73;ReadPosRankSum=1.621;VQSLOD=4.4072;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,17:18:48.06:604,48,0	1/1:0,8:8:18.06:250,18,0	1/1:5,4:5:15.03:162,15,0	0/1:6,2:5:27.10:63,0,27	1/1:0,11:11:33.06:413,33,0	1/1:1,16:17:48.13:648,48,0	1/1:0,10:10:30.06:396,30,0	1/1:0,12:12:36.10:475,36,0	1/1:0,6:6:18.06:250,18,0	1/1:1,6:7:21.07:292,21,0	1/1:0,10:9:21.05:270,21,0	1/1:1,9:10:30.07:395,30,0	1/1:0,11:11:33.11:459,33,0	1/1:0,7:7:21.07:288,21,0	1/1:0,18:18:54.12:702,54,0	1/1:0,16:16:45.15:625,45,0	1/1:0,14:13:36:454,36,0	1/1:1,11:11:30.10:418,30,0	1/1:0,11:11:33.11:447,33,0	1/1:2,10:12:35.99:439,36,0	1/1:0,20:20:51.13:689,51,0	1/1:0,8:8:24.08:333,24,0	1/1:0,8:8:24.08:328,24,0	1/1:2,4:5:2.99:42,3,0	1/1:2,9:11:30.10:416,30,0	1/1:0,10:10:30.10:417,30,0	1/1:0,21:21:63.18:836,63,0	./.
chr10	56054312	.	CT	C	5607.60	PASS	AB=0.929;AC=52;AF=0.963;AN=54;BaseQRankSum=4.439;DP=375;FS=3.023;HRun=4;HaplotypeScore=194.5492;InbreedingCoeff=-0.0426;MQ=68.59;MQ0=0;MQRankSum=-0.314;QD=14.95;ReadPosRankSum=4.070;VQSLOD=3.7227;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:22:19.28:172,19,0	1/1:10,0:10:23.35:199,23,0	0/1:12,0:10:59.77:61,0,60	0/1:10,2:10:18.24:29,0,18	1/1:12,0:12:24.50:159,25,0	1/1:18,0:18:45.13:336,45,0	1/1:15,0:15:34.37:240,34,0	1/1:17,0:17:11.05:179,11,0	1/1:11,1:12:29.35:261,29,0	1/1:10,0:10:24.18:166,24,0	1/1:13,0:13:17.94:145,18,0	1/1:11,0:11:29.29:202,29,0	1/1:10,0:10:24.83:173,25,0	1/1:7,2:9:20.28:179,20,0	1/1:20,0:20:52.76:357,53,0	1/1:18,1:19:33:308,33,0	1/1:17,0:15:25.50:178,25,0	1/1:12,0:12:32.57:206,33,0	1/1:12,0:12:29.56:197,30,0	1/1:15,0:15:17.73:176,18,0	1/1:18,0:18:46.63:297,47,0	1/1:11,0:11:18.82:180,19,0	1/1:12,0:12:31.62:204,32,0	1/1:4,0:4:8.91:71,9,0	1/1:11,1:12:32.55:225,33,0	1/1:13,1:14:38.76:263,39,0	1/1:25,1:26:54.40:445,54,0	./.
chr10	56054362	.	C	CA	21409.77	PASS	AB=0.827;AC=54;AF=0.964;AN=56;BaseQRankSum=-4.187;DP=567;FS=2.148;HRun=3;HaplotypeScore=118.7284;InbreedingCoeff=-0.0382;MQ=88.03;MQ0=0;MQRankSum=-6.352;QD=37.76;ReadPosRankSum=4.721;VQSLOD=3.8354;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,25:25:72.24:1078,72,0	1/1:0,11:11:30.10:449,30,0	0/1:21,8:28:99:347,0,172	0/1:23,4:25:99:314,0,138	1/1:0,18:18:51.13:716,51,0	1/1:2,17:19:57.19:848,57,0	1/1:0,24:24:66.22:988,66,0	1/1:2,26:28:75.24:1101,75,0	1/1:1,24:25:66.22:972,66,0	1/1:0,17:17:51.17:764,51,0	1/1:0,24:24:66.22:963,66,0	1/1:0,13:13:27.09:404,27,0	1/1:2,15:17:48.16:709,48,0	1/1:0,14:14:42.14:619,42,0	1/1:0,21:21:54.18:809,54,0	1/1:0,29:28:78.26:1168,78,0	1/1:1,27:27:69.23:1033,69,0	1/1:0,16:16:45.15:672,45,0	1/1:0,14:14:42.13:609,42,0	1/1:1,21:22:63.18:920,63,0	1/1:2,15:17:42.12:599,42,0	1/1:3,20:23:60.20:889,60,0	1/1:1,21:22:63.21:943,63,0	1/1:0,15:15:39.13:573,39,0	1/1:0,13:13:39.13:570,39,0	1/1:0,23:23:69.23:1016,69,0	1/1:2,26:28:78.26:1157,78,0	1/1:0,5:5:12.04:180,12,0
chr10	56054989	.	TGGCATC	T	12654	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=15.980;DP=604;FS=11.643;HRun=0;HaplotypeScore=135.9896;InbreedingCoeff=0.9973;MQ=80.68;MQ0=0;MQRankSum=-17.798;QD=56.49;ReadPosRankSum=1.687;VQSLOD=4.9367;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,141,4962	0/0:5,0:5:15.05:0,15,540	0/0:16,0:16:45.13:0,45,1414	0/0:23,0:23:63.20:0,63,1861	0/0:20,0:20:57.20:0,57,2053	0/0:23,0:23:69.24:0,69,2487	0/0:22,0:22:66.21:0,66,2295	0/0:25,0:25:63.22:0,63,2149	1/1:1,20:21:51.18:1207,51,0	1/1:2,20:21:57.18:1322,57,0	1/1:1,11:12:24.08:576,24,0	0/0:29,0:29:87.30:0,87,3112	0/0:16,0:16:48.15:0,48,1610	0/0:27,0:27:81.22:0,81,2651	1/1:0,20:20:45.15:1081,45,0	0/0:18,0:18:51.17:0,51,1741	0/0:26,0:26:75.26:0,75,2640	0/0:25,0:25:66.23:0,66,2340	1/1:6,17:23:54.18:1250,54,0	1/1:0,19:19:45.15:1081,45,0	1/1:5,15:20:30.10:702,30,0	0/0:18,0:18:54.19:0,54,1873	0/0:18,0:18:51.17:0,51,1778	0/0:22,0:22:66.23:0,66,2318	1/1:0,16:15:45.15:1065,45,0	1/1:2,23:26:72.23:1666,72,0	1/1:1,31:32:81.28:1944,81,0	1/1:1,12:13:33.11:760,33,0
chr10	56055773	.	C	CA	938.52	PASS	AC=2;AF=0.037;AN=54;BaseQRankSum=-3.069;DP=732;FS=1.730;HRun=1;HaplotypeScore=103.7163;InbreedingCoeff=0.9420;MQ=52.87;MQ0=24;MQRankSum=-1.898;QD=37.54;ReadPosRankSum=1.726;VQSLOD=3.8244;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:46:99:0,123,1562	0/0:9,0:8:24.08:0,24,312	./.	0/0:28,0:3:9.01:0,9,94	0/0:23,0:23:60.18:0,60,765	0/0:19,0:19:54.18:0,54,699	0/0:32,0:32:93.27:0,93,1177	0/0:42,0:39:93.29:0,93,1195	0/0:24,0:23:63.19:0,63,803	0/0:22,0:22:63.20:0,63,818	0/0:20,0:20:48.16:0,48,623	0/0:33,0:33:93.29:0,93,1193	0/0:27,0:27:69.02:0,69,880	0/0:19,0:19:54.18:0,54,701	0/0:36,0:36:99:0,99,1285	1/1:1,24:25:69.23:1033,69,0	0/0:35,0:36:63.26:0,63,1049	0/0:35,0:34:90.23:0,90,1168	0/0:24,0:17:48.16:0,48,623	0/0:17,0:17:51.15:0,51,648	0/0:26,0:23:69.22:0,69,895	0/0:32,0:32:75.23:0,75,959	0/0:14,0:14:32.77:0,33,428	0/0:35,0:31:90.29:0,90,1166	0/0:19,0:19:45.15:0,45,584	0/0:29,0:29:84.27:0,84,1090	0/0:20,0:20:60.20:0,60,779	0/0:12,0:12:27.09:0,27,350
chr10	56055851	.	A	ACC	2402.65	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=8.623;DP=564;FS=0.000;HRun=8;HaplotypeScore=96.1897;InbreedingCoeff=0.9678;MQ=66.86;MQ0=0;MQRankSum=-5.880;QD=14.47;ReadPosRankSum=-3.315;VQSLOD=0.6639;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:84.17:0,84,925	0/0:9,0:9:21.04:0,21,234	0/0:32,0:30:53.07:0,53,561	0/0:18,0:15:30.98:0,31,277	0/0:28,0:28:69.15:0,69,757	0/0:16,0:16:42.07:0,42,457	0/0:35,0:34:87.18:0,87,947	0/0:26,0:26:51.09:0,51,559	1/1:6,11:17:15.05:237,15,0	1/1:7,5:13:15.42:185,15,0	1/1:9,8:17:17.65:255,18,0	0/0:25,0:25:48.57:0,49,555	0/0:25,0:25:57.09:0,57,621	0/0:17,0:17:48.12:0,48,528	1/1:19,1:20:28.80:358,29,0	0/0:23,0:23:66.15:0,66,723	0/0:24,0:24:60.16:0,60,666	0/0:20,0:20:54.12:0,54,592	1/1:9,1:8:11.92:135,12,0	1/1:4,7:13:14.80:205,15,0	1/1:6,10:14:9.03:143,9,0	0/0:26,0:26:69.15:0,69,747	0/0:15,0:15:42.04:0,42,452	0/0:21,0:20:36.08:0,36,401	1/1:5,16:21:24.08:379,24,0	1/1:9,9:18:18.06:274,18,0	1/1:4,12:16:20.87:311,21,0	1/1:1,4:5:9.03:143,9,0
chr10	56055978	.	GCT	G	1565.68	PASS	AB=0.960;AC=34;AF=0.630;AN=54;BaseQRankSum=2.031;DP=524;FS=17.734;HRun=0;HaplotypeScore=91.8658;InbreedingCoeff=0.4333;MQ=65.81;MQ0=21;MQRankSum=0.451;QD=4.83;ReadPosRankSum=4.123;VQSLOD=1.2978;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:28:32.53:0,33,260	0/0:5,0:5:0:0,0,0	./.	0/0:37,0:23:0:0,0,0	0/0:30,0:30:5.75:0,6,50	1/1:13,0:13:14.89:107,15,0	1/1:16,0:15:8.16:70,8,0	0/0:35,0:34:5.96:0,6,43	1/1:15,0:14:8.49:55,8,0	0/1:17,0:16:35.93:36,0,58	1/1:19,0:18:11.82:82,12,0	1/1:13,0:13:8.96:69,9,0	0/0:15,0:15:11.96:0,12,109	0/0:13,0:13:4.05:0,4,104	1/1:14,0:14:11.37:89,11,0	1/1:15,0:16:20.77:154,21,0	1/1:17,1:17:6.44:155,6,0	1/1:8,0:15:11.82:87,12,0	0/1:11,0:10:0:0,0,0	1/1:25,0:25:11.94:90,12,0	0/1:17,0:17:8.27:51,0,8	1/1:15,0:15:11.94:90,12,0	0/1:11,5:15:0.13:0,0,0	1/1:22,2:24:33.92:374,34,0	1/1:11,0:10:5.98:48,6,0	0/1:22,0:20:3.35:69,0,3	1/1:14,0:13:5.97:49,6,0	0/1:13,0:12:6.62:45,0,7
chr10	56057044	.	CTGTGTGTGTGTGTGTGTG	C	748.22	PASS	AB=0.963;AC=15;AF=0.313;AN=48;BaseQRankSum=4.077;DP=501;FS=6.724;HRun=0;HaplotypeScore=181.4510;InbreedingCoeff=0.4522;MQ=69.53;MQ0=46;MQRankSum=-1.918;QD=5.06;ReadPosRankSum=-0.500;VQSLOD=2.1165;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:22:12.04:0,12,546	0/0:3,0:3:3.01:0,3,94	./.	./.	0/0:16,0:13:9.03:0,9,373	1/1:9,2:11:6.02:287,6,0	1/1:21,0:20:3.01:92,3,0	./.	0/0:13,0:12:6.02:0,6,153	0/0:20,0:18:17:0,17,265	./.	0/1:7,0:6:0:0,0,0	0/0:12,0:12:9.03:0,9,624	0/0:18,0:18:12.04:0,12,574	0/0:15,0:17:6.02:0,6,97	1/1:14,0:17:6.02:251,6,0	1/1:21,0:21:1.46:96,1,0	0/1:14,0:15:19.91:43,0,20	0/0:12,0:11:3.01:0,3,93	0/0:11,0:11:6:0,6,115	0/0:29,0:26:12.04:0,12,295	0/1:15,0:13:0:0,0,0	1/1:11,4:15:2.61:48,3,0	1/1:25,0:21:3.01:65,3,0	0/0:7,0:7:3.90:0,4,69	0/0:15,0:14:7.58:0,8,131	0/0:16,0:17:27.07:0,27,502	0/0:13,0:13:9.03:0,9,169
chr10	56059916	.	G	GT	7260.86	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=13.764;DP=633;FS=5.526;HRun=5;HaplotypeScore=123.8640;InbreedingCoeff=0.9999;MQ=88.18;MQ0=0;MQRankSum=-3.722;QD=34.74;ReadPosRankSum=-0.649;VQSLOD=2.8021;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:96.21:0,96,1020	0/0:11,0:11:33.06:0,33,344	0/0:29,0:29:68.34:0,68,702	0/0:18,0:18:42.10:0,42,449	0/0:25,0:25:75.19:0,75,804	0/0:16,0:16:42.10:0,42,451	0/0:25,0:25:72.18:0,72,773	0/0:37,0:37:99:0,102,1079	1/1:0,13:13:36.12:474,36,0	1/1:1,20:21:60.18:775,60,0	1/1:1,18:19:57.18:741,57,0	0/0:20,0:20:57.14:0,57,612	0/0:12,0:12:33.06:0,33,346	0/0:26,0:26:75.19:0,75,806	1/1:1,19:20:54.18:710,54,0	0/0:15,0:15:42.10:0,42,451	0/0:42,0:42:99:0,120,1288	0/0:35,0:35:96.22:0,96,1023	1/1:4,16:20:48.15:618,48,0	1/1:4,21:26:63.16:807,63,0	1/1:2,18:20:48.16:629,48,0	0/0:25,0:25:69.13:0,69,729	0/0:26,0:26:72.18:0,72,773	0/0:28,0:28:81.19:0,81,862	1/1:0,22:22:66.21:868,66,0	1/1:0,15:15:45.13:576,45,0	1/1:5,16:21:48.16:631,48,0	1/1:0,12:12:33.11:431,33,0
chr10	56062661	.	ATTTG	A	5970.24	PASS	AB=0.958;AC=23;AF=0.411;AN=56;BaseQRankSum=14.222;DP=636;FS=8.862;HRun=0;HaplotypeScore=101.7325;InbreedingCoeff=0.9225;MQ=64.23;MQ0=1;MQRankSum=1.792;QD=24.47;ReadPosRankSum=2.057;VQSLOD=4.3246;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:87.30:0,87,2112	0/0:8,0:8:15.05:0,15,365	0/0:13,0:12:20.27:0,20,381	0/0:19,0:14:6.02:0,6,137	0/0:21,0:21:45.14:0,45,1026	0/0:17,0:17:42.14:0,42,1018	0/0:22,0:22:36.12:0,36,873	0/0:48,1:49:23.29:0,23,1584	1/1:5,13:18:36.12:588,36,0	1/1:10,17:28:51.13:804,51,0	1/1:10,11:21:27.09:441,27,0	0/0:27,0:27:54.19:0,54,1314	0/0:18,0:18:30.10:0,30,730	0/0:14,0:14:33.10:0,33,753	1/1:12,16:29:42.14:665,42,0	0/1:22,1:23:3.84:4,0,929	0/0:33,0:33:72.25:0,72,1747	0/0:31,0:31:63.18:0,63,1478	1/1:12,5:17:15.05:237,15,0	1/1:9,17:26:39.13:637,39,0	1/1:4,14:18:33.11:539,33,0	0/0:30,0:30:60.19:0,60,1389	0/0:24,0:24:57.16:0,57,1285	0/0:26,0:26:63.22:0,63,1517	1/1:6,6:12:12.04:196,12,0	1/1:5,13:18:42.14:686,42,0	1/1:6,17:23:44.85:734,45,0	1/1:2,9:11:27.09:441,27,0
chr10	56064068	.	AGCGC	A	382.26	PASS	AC=4;AF=0.077;AN=52;BaseQRankSum=3.181;DP=323;FS=4.984;HRun=0;HaplotypeScore=72.1711;InbreedingCoeff=0.7102;MQ=56.63;MQ0=8;MQRankSum=-4.901;QD=29.40;ReadPosRankSum=-0.811;VQSLOD=2.7927;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:14:35.13:0,35,894	1/1:0,7:5:15.05:306,15,0	./.	0/0:6,0:1:0:0,0,0	0/0:4,0:4:12.03:0,12,284	0/0:22,0:21:63.22:0,63,1825	0/0:32,0:32:84.26:0,84,2212	1/1:0,6:4:12.04:187,12,0	0/0:2,0:2:6.02:0,6,174	0/0:7,0:7:15.02:0,15,343	0/0:3,0:3:6.02:0,6,170	0/0:18,0:18:54.19:0,54,1485	0/0:3,0:3:9.03:0,9,237	0/0:3,0:2:6.02:0,6,171	0/0:7,0:7:21.04:0,21,543	0/0:8,0:8:24.08:0,24,684	0/0:40,0:40:99:0,114,3085	0/0:28,0:28:81.28:0,81,2258	0/0:6,0:5:15.05:0,15,370	0/0:3,0:2:6.02:0,6,174	0/0:6,0:6:18.06:0,18,522	0/0:9,0:9:27.09:0,27,739	0/0:15,0:15:45.15:0,45,1280	0/0:45,0:45:99:0,135,3911	./.	0/0:10,0:10:30.10:0,30,835	0/0:4,0:4:12.04:0,12,348	0/0:12,0:12:30.10:0,30,869
chr10	56064302	.	G	GT	7817.85	PASS	AB=1.000;AC=41;AF=0.732;AN=56;BaseQRankSum=-5.158;DP=435;FS=0.456;HRun=9;HaplotypeScore=48.7244;InbreedingCoeff=0.8902;MQ=66.97;MQ0=1;MQRankSum=1.892;QD=24.20;ReadPosRankSum=1.647;VQSLOD=5.5057;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:50.97:0,51,443	0/0:6,0:6:11.99:0,12,104	0/0:14,0:9:14.64:0,15,109	0/1:13,0:10:5.34:5,0,101	0/0:15,0:15:38.98:0,39,338	1/1:0,12:12:21.06:232,21,0	1/1:1,17:18:42.11:465,42,0	0/0:27,0:27:62.90:0,63,534	1/1:1,13:14:10.04:339,10,0	1/1:0,18:18:54.13:586,54,0	1/1:2,12:14:33.04:345,33,0	1/1:0,10:10:27.07:299,27,0	0/0:15,0:15:41.90:0,42,352	0/0:12,0:12:32.99:0,33,285	1/1:4,12:16:30.08:332,30,0	1/1:1,9:10:21.06:232,21,0	1/1:6,30:35:78.56:863,79,0	1/1:11,19:30:75.18:818,75,0	1/1:10,21:30:66.07:713,66,0	1/1:0,14:14:39.11:430,39,0	1/1:4,6:10:18.02:187,18,0	1/1:1,2:3:6.02:66,6,0	1/1:1,15:16:39.11:431,39,0	1/1:1,9:10:15.17:254,15,0	1/1:2,10:12:24.06:264,24,0	1/1:0,12:12:33.09:365,33,0	1/1:2,10:13:32.75:327,33,0	1/1:0,11:11:24.06:265,24,0
chr10	56064494	.	CTT	C	4757.19	PASS	AB=0.816;AC=44;AF=0.786;AN=56;BaseQRankSum=2.295;DP=410;FS=7.212;HRun=15;HaplotypeScore=63.9711;InbreedingCoeff=0.5975;MQ=69.26;MQ0=5;MQRankSum=-2.015;QD=13.71;ReadPosRankSum=3.211;VQSLOD=3.7261;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:28:56.62:0,57,705	1/1:0,4:4:12:106,12,0	0/1:29,1:17:10.85:11,0,163	0/1:35,0:15:16.36:16,0,41	0/0:13,0:18:43.56:0,44,468	1/1:2,8:11:26.73:223,27,0	1/1:2,10:13:29.73:250,30,0	0/1:6,6:12:2.49:107,0,2	1/1:4,6:10:20.93:181,21,0	1/1:7,14:21:44.64:382,45,0	1/1:2,11:13:32.72:276,33,0	1/1:2,5:7:14.95:132,15,0	0/0:10,0:10:18.03:0,18,209	0/0:7,0:7:18.06:0,18,245	1/1:5,7:11:26.94:229,27,0	1/1:2,6:8:17.96:159,18,0	1/1:3,15:18:41.96:370,42,0	1/1:5,13:18:26.94:238,27,0	1/1:11,9:22:23:281,23,0	1/1:3,5:10:11.56:135,12,0	1/1:5,7:13:17.65:144,18,0	1/1:1,3:4:12:106,12,0	1/1:3,10:13:26.93:238,27,0	1/1:4,15:19:32.95:290,33,0	1/1:3,8:13:20.49:214,20,0	0/1:7,9:17:5.09:293,0,5	1/1:3,10:14:7.54:236,8,0	1/1:3,4:9:20.18:141,20,0
chr10	56064564	.	C	CTTTTTCT	10679.65	PASS	AB=0.773;AC=42;AF=0.750;AN=56;BaseQRankSum=3.373;DP=389;FS=3.002;HRun=0;HaplotypeScore=103.7133;InbreedingCoeff=0.6812;MQ=58.47;MQ0=5;MQRankSum=-7.156;QD=38.42;ReadPosRankSum=3.391;VQSLOD=4.2315;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:22:49:0,49,688	1/1:7,0:7:1.66:257,2,0	0/0:27,0:10:7.18:0,7,42	0/0:17,0:9:13.30:0,13,121	0/0:20,0:22:56.88:0,57,948	1/1:4,2:9:7.52:328,8,0	1/1:4,1:7:11.98:179,12,0	0/1:21,0:22:69.49:184,0,69	1/1:10,0:10:26.95:639,27,0	1/1:18,0:18:12.93:760,13,0	1/1:15,0:15:19.88:663,20,0	1/1:2,7:10:17.96:469,18,0	0/0:12,0:11:23.44:0,23,247	0/0:10,0:10:26.89:0,27,313	1/1:9,0:8:12.03:316,12,0	1/1:11,0:11:4.28:116,4,0	1/1:9,1:17:25.87:307,26,0	1/1:8,2:12:27.24:459,27,0	1/1:19,0:18:48.99:753,49,0	1/1:14,0:14:30.03:746,30,0	1/1:5,0:5:8.99:215,9,0	1/1:4,0:4:5.91:43,6,0	1/1:9,0:10:16.78:189,17,0	0/1:2,9:12:10.70:201,0,11	1/1:14,0:14:35.73:699,36,0	1/1:26,0:26:52.03:1701,52,0	1/1:20,0:19:38.98:882,39,0	1/1:6,0:6:18.06:574,18,0
chr10	56064569	.	T	TCTTTTTC	11431.67	PASS	AB=1.000;AC=34;AF=0.607;AN=56;BaseQRankSum=-0.537;DP=414;FS=0.000;HRun=0;HaplotypeScore=109.1052;InbreedingCoeff=0.2779;MQ=62.34;MQ0=5;MQRankSum=-5.194;QD=37.85;ReadPosRankSum=3.924;VQSLOD=4.5743;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:57.09:0,57,975	0/1:7,0:7:29.82:139,0,30	0/0:29,0:12:19.19:0,19,158	0/0:17,0:10:16.74:0,17,150	0/0:23,0:23:63.18:0,63,1274	0/1:9,0:9:40:212,0,40	0/1:8,0:8:15.78:85,0,16	0/1:23,0:23:63.68:64,0,327	1/1:4,7:12:27.03:775,27,0	1/1:12,6:23:9.64:1212,10,0	1/1:5,11:17:20.01:858,20,0	1/1:10,0:10:8.36:342,8,0	0/0:11,0:10:23.78:0,24,435	0/0:10,0:10:30.06:0,30,477	1/1:3,7:10:15.05:426,15,0	0/1:12,0:12:27.61:28,0,76	0/1:18,0:18:85.27:145,0,85	0/1:12,0:11:7.10:256,0,7	1/1:5,13:23:53.96:945,54,0	1/1:2,12:16:33.01:929,33,0	1/1:2,2:4:9.03:271,9,0	0/1:3,0:3:0.04:0,0,24	0/1:12,0:12:32.93:33,0,73	0/1:13,0:13:49.14:160,0,49	1/1:6,8:15:36.05:855,36,0	1/1:4,22:27:39.63:1940,40,0	1/1:4,15:19:36.11:1068,36,0	1/1:0,6:6:18.06:687,18,0
chr10	56064996	.	T	TCCCGAC	1608.97	PASS	AB=0.929;AC=28;AF=0.700;AN=40;BaseQRankSum=-0.565;DP=216;FS=6.439;HRun=0;HaplotypeScore=54.7815;InbreedingCoeff=0.5752;MQ=94.80;MQ0=0;MQRankSum=-4.211;QD=14.11;ReadPosRankSum=-1.396;VQSLOD=1.3287;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:15.03:0,15,269	1/1:2,1:3:3.48:98,3,0	0/0:20,0:20:12.86:0,13,169	0/0:21,0:21:11.53:0,12,169	./.	1/1:2,1:3:3.01:97,3,0	1/1:11,2:13:6.02:194,6,0	1/1:12,0:12:0.89:2,1,0	1/1:7,1:8:9.03:229,9,0	1/1:4,0:4:6.02:134,6,0	0/1:8,0:8:0:0,0,0	1/1:11,0:11:6.02:112,6,0	0/0:6,0:6:12.02:0,12,200	0/0:9,0:9:12.04:0,12,246	1/1:4,2:6:10.28:294,10,0	./.	1/1:10,4:14:9.03:251,9,0	./.	./.	./.	0/1:10,2:12:0:0,0,0	1/1:6,0:6:2.99:24,3,0	1/1:5,0:5:3.01:49,3,0	./.	./.	1/1:1,2:3:6.02:168,6,0	1/1:5,0:5:3.01:93,3,0	./.
chr10	56067908	.	T	TG	6851.90	PASS	AB=0.625;AC=40;AF=0.714;AN=56;BaseQRankSum=-6.769;DP=508;FS=3.346;HRun=9;HaplotypeScore=64.0473;InbreedingCoeff=0.5670;MQ=76.35;MQ0=0;MQRankSum=-1.003;QD=18.08;ReadPosRankSum=1.684;VQSLOD=5.2373;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:83.96:0,84,728	1/1:3,5:8:12.03:133,12,0	0/0:28,0:25:38.77:0,39,314	0/0:19,0:17:0.49:0,0,85	0/0:11,0:11:25.81:0,26,214	1/1:4,14:18:36.10:398,36,0	0/1:6,13:19:9.63:356,0,10	1/1:10,12:22:13.31:300,13,0	1/1:6,15:21:38.95:428,39,0	1/1:6,16:22:45.12:497,45,0	1/1:2,9:11:15.04:164,15,0	1/1:4,14:18:27.54:300,28,0	0/0:15,0:15:41.99:0,42,365	0/0:18,0:20:55:0,55,439	1/1:2,19:21:45.12:495,45,0	1/1:1,5:6:12.03:132,12,0	1/1:5,19:24:28.16:538,28,0	1/1:4,14:18:30.08:332,30,0	0/1:5,5:10:7.87:148,0,8	1/1:4,6:10:12.03:132,12,0	0/1:6,11:17:2:200,0,2	1/1:7,14:21:10.03:321,10,0	0/1:5,7:12:33.87:115,0,34	1/1:3,17:20:48.13:531,48,0	1/1:2,15:17:27.07:298,27,0	1/1:5,9:14:1.89:226,2,0	1/1:4,26:30:10.54:546,11,0	1/1:7,12:19:4.19:262,4,0
chr10	56068280	.	AGG	A	1581.59	PASS	AB=1.000;AC=34;AF=0.680;AN=50;BaseQRankSum=6.384;DP=413;FS=1.278;HRun=2;HaplotypeScore=96.8630;InbreedingCoeff=-0.0436;MQ=45.50;MQ0=12;MQRankSum=1.676;QD=4.33;ReadPosRankSum=1.093;VQSLOD=-0.6647;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:19,0:18:65.30:77,0,65	0/1:8,0:8:0.05:0,0,114	./.	./.	1/1:19,1:19:15.83:117,16,0	0/1:10,0:10:17.45:27,0,17	0/1:17,0:16:12.63:17,0,13	0/0:22,0:22:47.56:0,48,334	1/1:16,1:16:12.83:87,13,0	1/1:29,0:28:51.03:305,51,0	./.	1/1:11,0:11:7.79:34,8,0	1/1:12,2:14:12.79:141,13,0	0/0:10,0:10:12.11:0,12,126	1/1:11,1:11:8.99:80,9,0	0/1:17,0:17:42.69:43,0,120	0/1:19,0:18:33.96:34,0,89	0/1:20,0:14:28.49:84,0,28	1/1:11,0:11:31.94:219,32,0	0/1:12,0:12:0:0,0,0	1/1:3,0:3:2.92:17,3,0	0/1:22,0:21:24.49:24,0,47	1/1:17,0:17:2.88:17,3,0	0/1:18,0:17:3.63:27,0,4	0/1:33,0:33:34.55:57,0,35	0/1:15,0:14:18.22:89,0,18	1/1:15,0:15:8.72:191,9,0	1/1:6,0:4:5.96:46,6,0
chr10	56068281	.	GGA	G	2490.28	PASS	AB=0.894;AC=28;AF=0.560;AN=50;BaseQRankSum=1.711;DP=399;FS=36.560;HRun=0;HaplotypeScore=90.7426;InbreedingCoeff=0.1589;MQ=45.97;MQ0=12;MQRankSum=-0.839;QD=8.59;ReadPosRankSum=0.577;VQSLOD=1.3884;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:15,2:16:37.45:37,0,78	0/1:8,0:8:47.27:47,0,229	./.	./.	0/1:21,0:20:21.53:35,0,22	0/0:9,1:10:12.58:0,13,58	0/0:17,0:16:18.81:0,19,127	0/0:19,1:20:24.60:0,25,295	1/1:1,15:15:11.36:169,11,0	1/1:1,0:28:61.40:588,61,0	./.	0/1:11,0:11:25.78:26,0,28	0/0:14,0:14:15.06:0,15,82	0/0:10,0:10:21.03:0,21,307	1/1:2,10:11:9.03:146,9,0	0/1:15,0:15:26:26,0,110	0/1:19,0:18:41.35:88,0,41	0/1:20,0:14:76.17:76,0,131	1/1:0,11:11:32.89:323,33,0	0/1:0,12:12:0:0,0,0	1/1:3,0:3:3.01:40,3,0	0/0:22,0:21:14.20:0,14,123	1/1:15,0:15:2.26:39,2,0	0/1:18,0:17:28.97:51,0,29	0/1:5,26:31:8.59:91,0,9	1/1:0,12:11:29.49:338,29,0	1/1:12,2:14:30.02:454,30,0	1/1:2,4:4:6.02:85,6,0
chr10	56068314	.	AAAGAAAGAAAGAAAGAAAGG	A	4375.98	PASS	AB=0.995;AC=27;AF=0.482;AN=56;BaseQRankSum=-0.250;DP=452;FS=9.748;HRun=0;HaplotypeScore=196.4636;InbreedingCoeff=-0.0309;MQ=49.57;MQ0=13;MQRankSum=2.167;QD=13.22;ReadPosRankSum=-2.086;VQSLOD=2.7317;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:17:47.25:0,47,1596	0/0:10,0:10:30.10:0,30,1406	0/0:7,0:2:5.97:0,6,45	0/0:3,0:2:5.99:0,6,50	0/0:24,0:23:61.16:0,61,2081	1/1:16,0:16:35.72:596,36,0	1/1:20,0:19:39.62:526,40,0	0/0:27,0:25:68.24:0,68,1105	0/1:18,0:17:97.74:248,0,98	1/1:27,0:27:1.71:488,2,0	0/1:16,0:16:55.82:63,0,56	0/1:13,0:13:31.76:60,0,32	0/0:17,0:17:46.95:0,47,1728	0/0:15,0:15:36.09:0,36,1241	0/1:11,0:10:12.93:13,0,238	1/1:0,14:14:5.89:188,6,0	1/1:1,20:20:6.02:295,6,0	0/1:15,1:12:99:698,0,118	0/1:13,0:11:88.60:89,0,135	0/1:9,0:9:39.94:61,0,40	0/1:8,0:8:81.33:81,0,132	1/1:4,18:20:29.75:251,30,0	1/1:1,22:23:5.58:65,6,0	0/1:16,0:15:46.49:93,0,46	0/1:21,0:21:99:129,0,172	0/1:18,0:17:71.42:206,0,71	0/1:22,0:22:99:141,0,170	0/1:7,0:7:80.18:84,0,80
chr10	56068318	.	AAAGAAAGAAAGAAAGG	A	5524.26	PASS	AB=1.000;AC=33;AF=0.589;AN=56;BaseQRankSum=1.510;DP=471;FS=5.369;HRun=0;HaplotypeScore=174.8124;InbreedingCoeff=0.4132;MQ=50.21;MQ0=12;MQRankSum=3.005;QD=16.39;ReadPosRankSum=-0.810;VQSLOD=3.0813;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:19:52.58:0,53,1343	0/0:11,0:11:33.08:0,33,1143	0/0:9,0:3:8.95:0,9,66	0/0:6,0:3:8.98:0,9,72	0/0:24,0:23:60.69:0,61,1731	1/1:17,0:17:31.69:335,32,0	1/1:21,0:20:44.75:389,45,0	0/0:29,0:27:78.89:0,79,849	1/1:17,0:16:3.61:420,4,0	1/1:28,0:28:63.33:971,63,0	1/1:17,0:17:17.96:153,18,0	1/1:1,12:13:11.98:209,12,0	0/0:17,0:17:46.67:0,47,1367	0/0:18,0:18:45:0,45,1101	0/1:11,0:10:12.94:13,0,150	1/1:14,0:14:5.92:123,6,0	1/1:21,0:20:6.02:201,6,0	0/1:15,0:12:99:376,0,99	0/1:13,0:11:20.41:166,0,20	1/1:12,0:12:26.44:226,26,0	0/1:8,0:8:59.93:103,0,60	1/1:20,0:19:29.19:188,29,0	1/1:22,0:22:10.76:73,11,0	0/1:14,0:13:27.95:101,0,28	0/1:23,0:23:28.65:194,0,29	1/1:20,0:19:26.60:588,27,0	1/1:24,0:24:34.19:571,34,0	0/1:7,0:7:18.29:125,0,18
chr10	56070308	.	GT	G	6982.49	PASS	AB=0.740;AC=43;AF=0.768;AN=56;BaseQRankSum=6.502;DP=603;FS=11.964;HRun=12;HaplotypeScore=70.0864;InbreedingCoeff=0.7059;MQ=79.21;MQ0=0;MQRankSum=-3.358;QD=14.55;ReadPosRankSum=1.961;VQSLOD=4.6364;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,4:41:29.51:0,30,816	1/1:1,12:13:32.85:252,33,0	0/0:18,0:15:20.40:0,20,165	0/1:19,1:20:9.20:9,0,56	0/0:23,0:23:51.09:0,51,512	1/1:6,23:30:67.77:516,68,0	1/1:1,21:22:62.76:488,63,0	1/1:12,22:35:64.56:483,65,0	1/1:5,10:15:20.68:162,21,0	1/1:10,20:31:58.71:447,59,0	1/1:1,11:12:29.88:232,30,0	1/1:7,14:21:44.79:348,45,0	0/0:19,2:21:7.59:0,8,421	0/0:19,0:19:48.07:0,48,470	1/1:5,13:20:39.92:290,40,0	1/1:5,11:16:32.84:255,33,0	1/1:5,17:22:47.80:371,48,0	0/1:4,9:13:6.54:139,0,7	0/1:13,12:25:44.53:233,0,45	1/1:5,19:26:51.82:383,52,0	1/1:4,22:26:56.72:441,57,0	1/1:7,8:15:23.87:186,24,0	1/1:3,13:16:35.84:277,36,0	1/1:6,19:25:23.34:364,23,0	1/1:0,9:10:28.93:215,29,0	1/1:8,9:18:28.88:215,29,0	1/1:7,22:30:18.88:323,19,0	1/1:2,16:19:46.85:354,47,0
chr10	56071191	.	T	TAA	1375.74	PASS	AB=0.921;AC=34;AF=0.654;AN=52;BaseQRankSum=-1.828;DP=213;FS=31.280;HRun=11;HaplotypeScore=29.3155;InbreedingCoeff=0.5076;MQ=57.91;MQ0=18;MQRankSum=-5.717;QD=9.05;ReadPosRankSum=0.820;VQSLOD=-0.3033;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:17:44.89:0,45,435	0/1:2,0:2:0:0,0,0	0/0:6,0:5:14.89:0,15,130	0/0:8,0:7:9.88:0,10,77	0/0:19,0:18:39:0,39,378	0/1:4,0:6:20.08:48,0,20	./.	1/1:14,0:14:11.99:107,12,0	1/1:1,2:3:6.02:87,6,0	1/1:3,4:6:11.94:109,12,0	1/1:3,2:5:6.02:87,6,0	0/1:4,0:3:0:0,0,0	0/0:5,0:5:12.02:0,12,116	0/0:3,0:2:2.99:0,3,29	1/1:2,1:3:3.01:43,3,0	1/1:8,0:7:9.01:86,9,0	1/1:9,0:13:18.03:171,18,0	1/1:6,0:9:12.01:111,12,0	1/1:8,6:11:21.05:283,21,0	1/1:3,0:3:2.98:21,3,0	1/1:1,3:3:5.98:63,6,0	0/1:1,0:1:0:0,0,0	./.	0/1:2,0:1:0:0,0,0	0/1:5,1:4:14.31:32,0,14	1/1:8,8:14:9.76:186,10,0	1/1:4,3:5:6.02:81,6,0	1/1:4,2:3:2.98:21,3,0
chr10	56072320	.	C	CTG	1506.44	PASS	AB=0.886;AC=18;AF=0.321;AN=56;BaseQRankSum=-6.481;DP=707;FS=1.152;HRun=0;HaplotypeScore=163.0571;InbreedingCoeff=-0.0100;MQ=63.87;MQ0=6;MQRankSum=0.565;QD=4.29;ReadPosRankSum=0.701;VQSLOD=2.5400;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:32.32:0,32,206	1/1:8,0:8:5.51:49,6,0	0/1:37,0:21:1.24:1,0,7	0/0:25,0:17:0.78:0,1,31	0/0:13,0:13:8.33:0,8,44	1/1:8,6:15:2.97:20,3,0	0/1:16,9:26:8.57:123,0,9	1/1:32,0:32:11.15:75,11,0	0/0:18,0:18:23.59:0,24,175	0/0:27,0:27:19.12:0,19,95	0/0:19,0:19:7.31:0,7,29	0/1:15,5:20:45.21:45,0,56	0/1:33,0:32:26.83:27,0,187	0/0:20,0:20:4.67:0,5,171	0/0:39,0:39:24.78:0,25,196	0/1:10,13:23:37.69:216,0,38	0/1:14,4:18:37.02:166,0,37	0/1:24,1:25:77.49:152,0,77	0/1:21,0:20:51.77:59,0,52	0/0:27,0:27:11.13:0,11,167	0/0:60,0:60:42.81:0,43,374	0/1:13,2:15:1.92:99,0,2	0/1:14,1:15:12.13:60,0,12	0/1:43,7:50:14.19:560,0,14	0/0:19,0:19:15.39:0,15,85	0/0:40,0:40:27.05:0,27,200	0/0:22,0:22:33.77:0,34,234	0/1:13,0:13:15.88:16,0,109
chr10	56072333	.	TGTGC	T	4478.96	PASS	AB=0.990;AC=33;AF=0.589;AN=56;BaseQRankSum=-14.164;DP=695;FS=9.526;HRun=0;HaplotypeScore=172.5089;InbreedingCoeff=-0.7061;MQ=51.44;MQ0=12;MQRankSum=0.535;QD=6.44;ReadPosRankSum=-11.709;VQSLOD=-0.2820;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:26:99:132,0,331	1/1:8,0:8:6.88:62,7,0	1/1:29,0:10:18.43:159,18,0	0/1:33,0:12:69.80:105,0,70	0/1:14,0:14:33.71:64,0,34	1/1:14,0:14:12.85:102,13,0	0/1:28,0:28:99:143,0,108	0/1:30,0:26:65.87:275,0,66	0/1:17,0:17:99:144,0,255	1/1:26,2:28:34.22:373,34,0	1/1:14,3:17:20.94:235,21,0	0/1:16,0:16:29.35:29,0,176	0/1:32,0:30:99:245,0,366	0/1:22,0:22:22.49:22,0,325	0/1:40,0:40:99:218,0,400	0/1:22,0:22:15.32:15,0,302	0/1:22,0:22:99:114,0,298	0/1:26,0:26:99:230,0,156	0/1:18,0:16:99:146,0,107	0/1:22,0:22:99:101,0,378	0/1:61,0:61:99:354,0,692	0/1:15,0:15:56.22:56,0,81	0/1:13,0:13:73.14:73,0,73	0/1:52,0:52:99:320,0,479	0/1:14,2:16:99:157,0,144	0/1:38,0:38:99:371,0,334	0/1:20,1:21:88:88,0,412	0/1:14,1:15:99:142,0,233
chr10	56072335	.	TGC	T	6614.48	PASS	AB=0.961;AC=36;AF=0.643;AN=56;BaseQRankSum=-13.154;DP=692;FS=0.814;HRun=0;HaplotypeScore=148.0954;InbreedingCoeff=-0.5500;MQ=50.28;MQ0=13;MQRankSum=0.412;QD=9.56;ReadPosRankSum=-12.927;VQSLOD=0.5541;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:24,2:26:99:218,0,101	1/1:8,0:8:8.24:64,8,0	1/1:29,0:8:18.43:159,18,0	0/1:32,0:9:46.88:105,0,47	0/1:12,2:14:0.12:168,0,0	1/1:13,0:13:12.46:101,12,0	0/1:28,0:28:3.50:194,0,4	1/1:28,0:24:60.69:451,61,0	0/1:16,1:17:97.17:153,0,97	1/1:2,25:27:68.91:690,69,0	1/1:14,2:16:20.97:189,21,0	0/1:16,0:16:31.85:32,0,70	0/1:29,4:31:99:394,0,117	0/1:22,0:22:62.12:62,0,140	0/1:40,2:42:99:274,0,127	0/1:23,0:23:55.20:55,0,56	0/1:22,0:22:23.28:165,0,23	1/1:24,3:27:0.91:392,1,0	0/1:15,1:14:23.38:222,0,23	0/1:22,2:24:97.53:248,0,98	0/1:60,2:62:99:623,0,117	1/1:15,0:15:12.31:118,12,0	0/1:13,0:13:15.84:119,0,16	0/1:52,0:52:58.89:432,0,59	0/1:14,2:16:29.46:181,0,29	0/1:34,2:36:66.54:523,0,67	0/1:20,1:21:99:140,0,154	0/1:14,0:14:78.75:142,0,79
chr10	56072472	.	G	GTGTCTGTC	5811.74	PASS	AB=0.757;AC=35;AF=0.648;AN=54;BaseQRankSum=-3.643;DP=666;FS=3.197;HRun=0;HaplotypeScore=199.4198;InbreedingCoeff=0.6060;MQ=45.53;MQ0=7;MQRankSum=-1.861;QD=12.97;ReadPosRankSum=1.178;VQSLOD=3.9936;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:14.55:0,15,451	0/0:5,7:12:0.25:0,0,1	0/0:35,0:18:26.35:0,26,411	0/0:29,0:17:22.40:0,22,444	0/1:32,0:32:0.39:0,0,547	./.	1/1:15,11:27:5.99:19,6,0	1/1:13,0:16:17.93:268,18,0	0/1:8,9:18:0:0,0,0	1/1:11,24:37:53.99:2087,54,0	0/1:9,11:22:0:0,0,0	0/0:8,4:13:3:0,3,25	0/0:27,0:27:20.56:0,21,476	0/0:26,0:26:24.51:0,25,333	1/1:13,17:32:5.01:41,5,0	1/1:3,9:13:3.01:125,3,0	1/1:16,0:16:7.85:209,8,0	1/1:9,2:11:5.05:79,5,0	1/1:7,4:13:20.98:501,21,0	1/1:7,20:31:3.01:85,3,0	1/1:30,3:33:9.62:141,10,0	1/1:6,29:36:0.94:2,1,0	1/1:5,14:22:2.60:10,3,0	1/1:15,5:20:0.45:2,0,0	0/0:5,17:26:2.69:0,3,16	1/1:11,25:37:45.81:1280,46,0	1/1:7,12:23:24.27:725,24,0	1/1:2,4:6:5.61:237,6,0
chr10	56073818	.	TTG	T	42.28	PASS	AB=0.750;AC=1;AF=0.018;AN=56;BaseQRankSum=3.736;DP=531;FS=12.115;HRun=0;HaplotypeScore=62.7929;InbreedingCoeff=-0.0221;MQ=74.50;MQ0=0;MQRankSum=2.300;QD=3.52;ReadPosRankSum=-3.399;VQSLOD=-0.1932;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:72.25:0,72,1421	0/0:5,0:5:15.04:0,15,270	0/1:8,4:12:99:117,0,252	0/0:5,0:7:6.62:0,7,123	0/0:26,0:26:78.27:0,78,1556	0/0:27,0:27:78.27:0,78,1584	0/0:20,0:20:60.20:0,60,1183	0/0:24,0:24:69.17:0,69,1100	0/0:21,0:21:63.22:0,63,1260	0/0:27,0:27:81.27:0,81,1601	0/0:23,0:23:69.20:0,69,1296	0/0:23,0:23:66.20:0,66,1269	0/0:21,0:21:63.22:0,63,1254	0/0:14,0:14:42.14:0,42,805	0/0:23,0:23:66.23:0,66,1320	0/0:19,0:19:57.20:0,57,1139	0/0:24,0:24:72.22:0,72,1423	0/0:15,0:15:45.13:0,45,875	0/0:21,0:21:63.17:0,63,1153	0/0:16,0:16:48.15:0,48,898	0/0:13,0:13:39.13:0,39,773	0/0:18,0:18:54.15:0,54,974	0/0:22,0:22:63.19:0,63,1202	0/0:19,0:19:57.17:0,57,1096	0/0:15,0:15:45.13:0,45,825	0/0:22,0:22:66.22:0,66,1287	0/0:14,0:14:42.07:0,42,772	0/0:16,0:16:48.16:0,48,975
chr10	56074497	.	C	CG	268.79	PASS	AC=8;AF=0.80;AN=10;DP=106;FS=0.000;HRun=0;HaplotypeScore=22.1149;MQ=8.45;MQ0=97;QD=17.92;VQSLOD=4.5766;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	1/1:3,1:1:3.01:44,3,0	./.	./.	0/0:0,1:1:0.47:0,0,1	./.	./.	./.	./.	1/1:1,2:2:6.02:90,6,0	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	1/1:0,4:4:12.04:156,12,0	1/1:3,1:1:3.01:47,3,0	./.	./.
chr10	56074510	.	CT	C	112.02	PASS	AC=10;AF=1.00;AN=10;DP=84;FS=0.000;HRun=1;HaplotypeScore=25.2532;MQ=9.49;MQ0=75;QD=7.00;VQSLOD=0.4376;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	1/1:3,1:1:2.84:14,3,0	./.	./.	1/1:0,1:1:3.01:31,3,0	./.	./.	./.	./.	1/1:1,2:2:5.06:20,5,0	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	1/1:0,4:4:11.88:98,12,0	1/1:3,1:1:2.90:16,3,0	./.	./.
chr10	56075538	.	T	TACACACACACACACAC	10084.34	PASS	AB=0.986;AC=45;AF=0.804;AN=56;BaseQRankSum=-0.866;DP=750;FS=9.697;HRun=0;HaplotypeScore=291.2541;InbreedingCoeff=0.4523;MQ=56.33;MQ0=17;MQRankSum=-4.679;QD=16.50;ReadPosRankSum=-4.365;VQSLOD=1.6217;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:47:32.57:0,33,2332	1/1:10,0:10:18.05:595,18,0	0/0:43,0:27:5.97:0,6,54	0/1:48,0:29:6.68:11,0,7	0/0:30,0:30:33.45:0,33,1788	1/1:9,5:26:3.01:227,3,0	0/1:34,0:33:21.46:472,0,21	1/1:30,0:30:46.05:749,46,0	1/1:15,0:19:17.49:256,17,0	1/1:16,0:27:36.49:691,36,0	1/1:17,0:21:21.51:456,22,0	1/1:33,0:31:22.28:813,22,0	0/0:18,0:19:31.15:0,31,1124	0/1:21,0:21:15.96:16,0,885	1/1:10,0:32:7.64:226,8,0	1/1:22,1:23:16.87:751,17,0	1/1:23,0:23:24.80:852,25,0	1/1:25,0:25:38.48:1028,38,0	1/1:19,0:16:26.98:475,27,0	1/1:12,0:23:3.01:89,3,0	1/1:18,0:31:3.01:49,3,0	1/1:6,2:21:3.01:227,3,0	1/1:17,0:17:8.22:182,8,0	1/1:15,0:26:4.91:246,5,0	1/1:7,0:22:6.02:177,6,0	1/1:21,0:41:66.08:1266,66,0	1/1:16,0:24:3.90:91,4,0	1/1:2,0:4:6.02:138,6,0
chr10	56075947	.	AC	A	9856.50	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=14.302;DP=676;FS=0.930;HRun=1;HaplotypeScore=66.8171;InbreedingCoeff=1.0000;MQ=82.24;MQ0=0;MQRankSum=-3.715;QD=38.81;ReadPosRankSum=2.809;VQSLOD=5.5618;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:56:99:0,171,2608	0/0:12,0:12:36.11:0,36,552	0/0:17,0:17:45.93:0,46,680	0/0:24,0:24:61.16:0,61,992	0/0:25,0:25:69.20:0,69,1053	0/0:22,0:22:66.09:0,66,1022	0/0:30,0:30:90.25:0,90,1359	0/0:30,0:30:90.31:0,90,1436	1/1:0,26:26:69.23:965,69,0	1/1:0,30:30:87.28:1199,87,0	1/1:0,19:19:48.12:649,48,0	0/0:20,0:20:60.20:0,60,959	0/0:26,0:26:78.27:0,78,1240	0/0:23,0:23:69.22:0,69,1074	1/1:0,27:27:75.25:1049,75,0	0/0:23,0:23:69.24:0,69,1096	0/0:31,0:31:93.30:0,93,1455	0/0:16,0:16:48.13:0,48,709	1/1:0,27:27:81.25:1107,81,0	1/1:0,19:19:57.15:775,57,0	1/1:0,27:27:72.24:1007,72,0	0/0:21,0:21:60.18:0,60,933	0/0:21,0:21:60.20:0,60,954	0/0:24,0:24:72.22:0,72,1123	1/1:0,21:21:54.18:755,54,0	1/1:0,23:23:69.23:965,69,0	1/1:0,18:18:51.17:713,51,0	1/1:0,17:17:48.16:671,48,0
chr10	56077304	.	T	TC	20229.08	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-13.525;DP=572;FS=2.318;HRun=1;HaplotypeScore=51.9605;InbreedingCoeff=0.9988;MQ=85.84;MQ0=0;MQRankSum=-3.963;QD=44.36;ReadPosRankSum=2.448;VQSLOD=4.8745;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:96.31:0,96,1311	1/1:0,9:9:21.01:336,21,0	0/0:23,0:23:62.94:0,63,744	0/0:18,0:18:51.14:0,51,660	0/0:12,0:12:36.12:0,36,503	1/1:0,17:17:48.16:767,48,0	1/1:1,28:29:75.26:1199,75,0	1/1:1,24:25:69.22:1077,69,0	1/1:0,17:17:39.13:623,39,0	1/1:0,19:19:57.18:887,57,0	1/1:0,12:12:33.11:516,33,0	1/1:0,20:20:57.19:911,57,0	0/0:16,0:16:45.15:0,45,629	0/0:14,0:14:42.14:0,42,587	1/1:1,17:18:48.16:767,48,0	1/1:0,22:22:63.21:1007,63,0	1/1:0,34:33:99:1582,99,0	1/1:0,22:22:66.23:1054,66,0	1/1:0,14:14:42.12:646,42,0	1/1:0,13:13:36.12:561,36,0	1/1:1,54:55:99:2350,148,0	1/1:1,11:12:33.11:527,33,0	1/1:0,11:11:30.10:480,30,0	1/1:0,18:18:54.18:863,54,0	1/1:0,14:14:36.12:575,36,0	1/1:1,25:26:75.26:1199,75,0	1/1:0,22:22:63.21:1007,63,0	1/1:0,27:27:81.28:1294,81,0
chr10	56078613	.	G	GTTTT	5575.40	PASS	AB=0.618;AC=24;AF=0.429;AN=56;BaseQRankSum=-1.094;DP=540;FS=6.221;HRun=9;HaplotypeScore=109.6350;InbreedingCoeff=0.5505;MQ=71.33;MQ0=4;MQRankSum=-8.394;QD=20.42;ReadPosRankSum=-1.223;VQSLOD=2.0458;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:64.37:0,64,1168	0/0:6,0:6:18.06:0,18,262	0/0:42,0:24:2.94:0,3,227	0/1:26,0:18:49.40:49,0,155	0/0:28,0:29:82.47:0,82,1163	1/1:2,13:17:33.11:744,33,0	1/1:2,8:11:15.05:300,15,0	0/0:27,0:27:51.06:0,51,727	0/0:5,0:19:3.08:0,3,22	0/1:3,0:24:15.30:15,0,29	0/0:0,0:21:21.40:0,21,63	1/1:1,12:17:27.09:588,27,0	0/0:13,0:13:33.53:0,34,459	0/0:24,0:24:60.15:0,60,878	0/0:4,0:9:4.94:0,5,13	1/1:4,10:15:30.10:698,30,0	1/1:5,18:27:45.15:1032,45,0	1/1:2,16:20:33.11:753,33,0	0/1:3,0:16:0.70:1,0,18	0/1:1,0:18:17.44:17,0,21	0/0:1,0:10:11.21:0,11,30	1/1:2,5:9:18.03:313,18,0	1/1:2,11:13:24.08:556,24,0	1/1:4,13:18:24.08:502,24,0	0/0:1,0:20:21.15:0,21,56	0/1:0,0:16:3.14:3,0,27	0/1:8,0:22:3.46:3,0,22	0/0:2,0:14:4.11:0,4,67
chr10	56079006	.	T	TA	706.64	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-7.175;DP=485;FS=0.000;HRun=8;HaplotypeScore=52.0027;InbreedingCoeff=0.9603;MQ=69.77;MQ0=1;MQRankSum=0.138;QD=22.08;ReadPosRankSum=-1.971;VQSLOD=2.8709;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:87.05:0,87,795	1/1:0,13:13:32.89:381,33,0	0/0:16,0:14:12.45:0,12,172	0/0:13,0:7:12:0,12,109	0/0:17,0:17:42.02:0,42,384	0/0:18,0:18:54.02:0,54,489	0/0:18,0:18:42:0,42,378	1/1:6,13:19:39.11:447,39,0	0/0:7,0:7:21:0,21,187	0/0:28,0:28:74.98:0,75,674	0/0:20,0:20:54.01:0,54,490	0/0:25,0:25:63.03:0,63,576	0/0:17,0:17:39.01:0,39,357	0/0:13,0:13:32.88:0,33,302	0/0:11,0:11:27:0,27,247	0/0:15,0:15:39.02:0,39,356	0/0:27,0:27:78.04:0,78,714	0/0:21,0:21:57.02:0,57,521	0/0:13,0:13:24.01:0,24,219	0/0:17,0:17:47.99:0,48,430	0/0:13,0:13:36.02:0,36,329	0/0:10,0:10:24.01:0,24,219	0/0:11,0:11:24:0,24,220	0/0:14,0:14:39:0,39,351	0/0:27,0:27:72.01:0,72,652	0/0:19,0:19:51.01:0,51,462	0/0:23,0:23:60.01:0,60,544	0/0:7,0:7:18:0,18,165
chr10	56080116	.	C	CG	2022.21	PASS	AB=1.000;AC=18;AF=0.333;AN=54;BaseQRankSum=-2.305;DP=337;FS=1.893;HRun=1;HaplotypeScore=64.1937;InbreedingCoeff=0.8093;MQ=43.26;MQ0=28;MQRankSum=-0.552;QD=19.63;ReadPosRankSum=0.321;VQSLOD=3.8080;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:33:60.12:0,60,710	0/0:2,0:2:6.02:0,6,77	./.	0/1:7,0:3:0:0,0,0	0/0:25,0:25:54.05:0,54,591	1/1:2,11:11:30.09:422,30,0	1/1:4,7:9:13.75:220,14,0	0/0:24,0:24:63.11:0,63,751	0/0:7,0:7:21.06:0,21,249	0/0:14,0:13:35.85:0,36,401	0/0:8,0:5:15.04:0,15,178	1/1:3,4:6:12.03:153,12,0	0/0:11,0:9:21.05:0,21,245	0/0:6,0:6:12.04:0,12,154	0/0:12,0:10:17.40:0,17,176	1/1:2,3:5:15.04:199,15,0	1/1:9,9:15:20.54:400,21,0	0/1:8,0:4:10.92:35,0,11	0/0:13,0:11:29.79:0,30,308	0/0:15,0:13:23.84:0,24,248	0/0:5,0:3:5.96:0,6,44	1/1:2,6:8:4.12:188,4,0	1/1:9,9:16:15.99:373,16,0	1/1:1,7:7:15.05:224,15,0	0/0:16,0:15:33.06:0,33,378	0/0:15,0:14:30.08:0,30,364	0/0:12,0:9:15.04:0,15,181	0/0:15,0:12:33.08:0,33,403
chr10	56080134	.	A	ACC	5824.91	PASS	AB=0.744;AC=23;AF=0.411;AN=56;BaseQRankSum=6.811;DP=542;FS=0.767;HRun=0;HaplotypeScore=125.4989;InbreedingCoeff=-0.5696;MQ=40.56;MQ0=29;MQRankSum=-0.723;QD=14.49;ReadPosRankSum=4.515;VQSLOD=4.5301;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:45:99:0,115,1488	0/1:3,2:5:72.83:78,0,73	0/0:20,0:6:11.80:0,12,132	0/0:22,0:11:8.64:0,9,114	0/0:27,0:27:73.51:0,74,857	0/1:9,4:11:99:104,0,209	0/1:11,11:20:99:319,0,123	0/1:24,6:29:99:288,0,601	0/1:10,4:14:99:216,0,205	0/1:17,8:23:99:327,0,354	0/1:14,10:22:99:467,0,107	0/1:6,6:12:58.34:352,0,58	0/0:13,0:12:32.14:0,32,437	0/0:12,0:12:25.28:0,25,295	0/1:14,5:17:72.44:309,0,72	0/1:6,8:14:87.93:330,0,88	0/1:21,5:23:99:301,0,208	0/1:4,6:7:21.27:201,0,21	0/1:20,5:22:99:262,0,346	0/1:14,11:23:99:432,0,234	0/1:5,1:4:20.46:68,0,20	0/1:8,6:14:99:190,0,181	0/1:14,8:20:99:226,0,231	1/1:6,1:6:8.41:103,8,0	0/1:15,7:20:99:293,0,168	0/1:16,7:18:99:368,0,160	0/1:17,9:21:99:418,0,115	0/1:12,5:14:99:171,0,255
chr10	56080135	.	A	ACC	3017.43	PASS	AB=0.986;AC=23;AF=0.411;AN=56;BaseQRankSum=9.482;DP=537;FS=0.000;HRun=0;HaplotypeScore=133.4814;InbreedingCoeff=-0.5664;MQ=40.70;MQ0=28;MQRankSum=-1.876;QD=7.58;ReadPosRankSum=6.301;VQSLOD=2.6241;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:45:99:0,116,1534	0/1:5,0:5:38.31:38,0,79	0/0:20,0:6:13.80:0,14,151	0/0:22,0:11:12.03:0,12,143	0/0:27,0:27:71.14:0,71,861	0/1:13,0:11:60.71:61,0,192	0/1:21,0:20:99:187,0,121	0/1:30,0:29:99:157,0,583	0/1:13,0:13:99:106,0,197	0/1:23,1:22:99:193,0,340	0/1:23,2:23:99:243,0,108	0/1:13,0:12:61.14:182,0,61	0/0:13,0:12:32.57:0,33,419	0/0:11,0:11:27.02:0,27,327	0/1:17,2:17:94.29:177,0,94	0/1:13,0:13:78.97:189,0,79	0/1:25,1:23:99:168,0,252	0/1:10,0:7:20.88:130,0,21	0/1:26,0:23:99:165,0,384	0/1:26,0:24:99:235,0,235	0/1:6,0:4:25.39:29,0,25	0/1:14,0:14:99:103,0,182	0/1:20,1:19:99:104,0,230	1/1:7,0:6:8.10:63,8,0	0/1:22,0:20:99:154,0,181	0/1:22,0:17:99:201,0,155	0/1:25,0:20:99:200,0,115	0/1:17,0:14:95.67:96,0,255
chr10	56080137	.	A	AC	270.44	PASS	AB=0.779;AC=2;AF=0.036;AN=56;BaseQRankSum=-2.181;DP=535;FS=4.454;HRun=0;HaplotypeScore=133.0338;InbreedingCoeff=-0.0476;MQ=43.92;MQ0=26;MQRankSum=-3.507;QD=7.95;ReadPosRankSum=-1.397;VQSLOD=3.4842;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:44:99:0,111,986	0/1:4,1:5:31.07:31,0,60	0/0:21,0:7:9.20:0,9,58	0/0:23,0:12:8.22:0,8,102	0/0:26,0:26:70.79:0,71,561	0/0:12,0:10:26.79:0,27,208	0/0:21,0:20:24.83:0,25,281	0/1:18,11:28:99:328,0,165	0/0:13,0:13:38.16:0,38,276	0/0:23,0:21:59.64:0,60,453	0/0:25,0:24:55.37:0,55,387	0/0:13,0:12:35.73:0,36,288	0/0:13,0:12:35.37:0,35,316	0/0:11,0:11:24.80:0,25,207	0/0:18,0:16:40.54:0,41,282	0/0:13,0:13:37.41:0,37,309	0/0:26,0:23:58.95:0,59,418	0/0:11,0:8:17.99:0,18,168	0/0:25,0:23:63.72:0,64,429	0/0:26,0:24:62.33:0,62,492	0/0:6,0:4:8.93:0,9,67	0/0:14,0:14:32.74:0,33,251	0/0:23,0:21:41.67:0,42,299	0/0:7,0:7:6.87:0,7,42	0/0:22,0:20:46.76:0,47,342	0/0:22,0:17:49.32:0,49,341	0/0:26,0:21:49.39:0,49,390	0/0:16,0:13:35.56:0,36,263
chr10	56080141	.	A	AC	1470.61	PASS	AB=0.986;AC=23;AF=0.411;AN=56;BaseQRankSum=5.878;DP=530;FS=1.641;HRun=0;HaplotypeScore=127.3765;InbreedingCoeff=-0.5428;MQ=48.39;MQ0=18;MQRankSum=-1.397;QD=3.76;ReadPosRankSum=5.099;VQSLOD=3.2349;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:42:99:0,102,904	0/1:5,0:5:16.61:31,0,17	0/0:24,0:10:19.19:0,19,137	0/0:24,0:13:8.28:0,8,109	0/0:26,0:26:77.33:0,77,629	0/1:12,0:11:12.62:13,0,100	0/1:22,0:21:14.80:98,0,15	0/1:27,0:26:99:107,0,118	0/1:13,0:13:28.95:29,0,80	0/1:25,1:24:99:137,0,168	0/1:22,2:23:38.06:141,0,38	0/1:14,0:12:17.52:94,0,18	0/0:12,0:12:35.90:0,36,340	0/0:10,0:10:24.80:0,25,201	0/1:16,2:16:60.88:62,0,61	0/1:13,0:13:30.54:58,0,31	0/1:24,1:23:69.60:70,0,167	0/1:11,0:9:18.15:65,0,18	0/1:26,0:24:98.49:98,0,168	0/1:24,0:23:99:115,0,118	0/1:7,0:5:8.59:38,0,9	0/1:13,0:13:24.91:25,0,71	0/1:22,1:22:81.41:81,0,100	1/1:7,0:7:10.08:55,10,0	0/1:22,0:20:35.42:35,0,109	0/1:22,0:17:31.53:150,0,32	0/1:25,0:21:82.36:91,0,82	0/1:12,0:10:33.01:40,0,33
chr10	56080718	.	TGGAACA	T	21355.63	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=12.968;DP=513;FS=4.079;HRun=0;HaplotypeScore=143.1354;InbreedingCoeff=0.9775;MQ=72.40;MQ0=0;MQRankSum=-15.773;QD=55.61;ReadPosRankSum=2.133;VQSLOD=4.6149;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:57.16:0,57,1830	1/1:0,5:5:12.04:283,12,0	0/0:16,0:16:45.10:0,45,1254	0/0:14,0:14:24.50:0,24,924	0/0:22,0:22:63.20:0,63,2076	1/1:1,14:15:39.13:921,39,0	1/1:3,21:24:60.21:1417,60,0	1/1:3,20:23:60.19:1372,60,0	1/1:1,16:17:42.14:992,42,0	1/1:1,19:20:57.16:1254,57,0	1/1:3,26:29:69.24:1628,69,0	1/1:1,16:17:45.15:1063,45,0	0/0:28,0:28:78.27:0,78,2750	0/0:30,0:30:87.29:0,87,2951	1/1:2,24:26:63.22:1488,63,0	1/1:1,20:21:54.19:1276,54,0	1/1:1,9:10:15.05:354,15,0	1/1:2,14:16:30.10:709,30,0	1/1:4,14:18:39.12:876,39,0	1/1:0,24:24:60.21:1417,60,0	1/1:2,11:13:15.05:354,15,0	1/1:0,18:18:54.19:1275,54,0	1/1:3,11:14:29.85:706,30,0	1/1:6,10:16:15.05:354,15,0	1/1:0,17:17:45.15:1063,45,0	1/1:5,16:21:51.18:1204,51,0	1/1:1,15:16:45.15:1063,45,0	1/1:0,4:4:12.04:284,12,0
chr10	56081100	.	CACAT	C	4675.57	PASS	AB=0.891;AC=21;AF=0.389;AN=54;BaseQRankSum=11.531;DP=758;FS=0.888;HRun=0;HaplotypeScore=128.2986;InbreedingCoeff=0.5740;MQ=67.45;MQ0=7;MQRankSum=0.301;QD=14.43;ReadPosRankSum=0.255;VQSLOD=4.2344;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:48:39.11:0,39,689	0/1:15,0:15:10.67:11,0,709	./.	0/0:23,0:11:0.47:0,0,1	0/1:15,1:16:16.71:17,0,600	1/1:15,13:28:27.09:421,27,0	1/1:18,10:28:27.09:420,27,0	0/0:34,0:34:21.06:0,21,396	0/0:26,0:26:36.11:0,36,803	0/0:26,0:26:51.17:0,51,1155	0/0:26,0:26:45.15:0,45,1061	1/1:8,12:23:38.61:548,39,0	0/0:22,0:22:45.14:0,45,994	0/0:29,0:29:51.18:0,51,1181	0/0:18,0:18:30.10:0,30,708	0/1:5,8:13:45.52:304,0,46	1/1:24,13:37:39.13:609,39,0	1/1:14,13:27:36.12:562,36,0	0/1:24,1:25:19.74:20,0,460	0/1:26,2:28:51.47:51,0,772	0/0:37,1:38:7.35:0,7,1089	1/1:10,12:22:30.09:468,30,0	1/1:7,15:23:30.04:449,30,0	1/1:17,22:39:51.17:796,51,0	0/0:29,1:30:7.37:0,7,1152	0/0:29,0:30:60.21:0,60,1398	0/0:39,0:39:46.24:0,46,1446	0/0:11,0:11:15.05:0,15,354
chr10	56081632	.	AT	A	5642.35	PASS	AB=0.551;AC=21;AF=0.375;AN=56;BaseQRankSum=11.284;DP=719;FS=2.185;HRun=9;HaplotypeScore=76.9391;InbreedingCoeff=0.9378;MQ=77.67;MQ0=0;MQRankSum=-1.840;QD=21.54;ReadPosRankSum=3.340;VQSLOD=5.7034;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,117,1328	1/1:0,11:11:27.01:247,27,0	0/0:28,0:25:46.78:0,47,459	0/0:22,0:21:22.36:0,22,336	0/0:26,0:26:72.21:0,72,831	1/1:2,22:24:60.03:549,60,0	1/1:4,21:25:57.03:522,57,0	1/1:4,24:28:72.02:655,72,0	0/0:36,0:36:99:0,108,1246	0/0:32,0:32:84.11:0,84,939	0/0:19,0:19:54.13:0,54,595	1/1:2,24:26:66.03:604,66,0	0/0:20,0:20:57.15:0,57,647	0/0:29,0:29:81.22:0,81,922	0/0:36,0:36:99:0,99,1143	0/1:5,22:27:6.34:459,0,6	1/1:0,25:25:63.03:577,63,0	1/1:3,25:28:63.02:577,63,0	0/0:17,0:17:45.13:0,45,512	0/0:28,0:28:75.21:0,75,856	0/0:28,0:28:78.20:0,78,879	1/1:2,21:23:57.02:521,57,0	1/1:3,15:18:35.91:329,36,0	1/1:2,25:27:66.03:604,66,0	0/0:16,0:16:42.12:0,42,477	0/0:37,0:37:90.27:0,90,1039	0/0:26,0:25:63.19:0,63,726	0/0:14,0:14:39.08:0,39,420
chr10	56083147	.	ATTC	A	1824.30	PASS	AB=0.845;AC=38;AF=0.731;AN=52;BaseQRankSum=3.783;DP=236;FS=12.795;HRun=0;HaplotypeScore=42.8829;InbreedingCoeff=0.5382;MQ=69.32;MQ0=3;MQRankSum=-1.652;QD=13.12;ReadPosRankSum=2.314;VQSLOD=1.7999;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:42.14:0,42,817	./.	0/0:26,0:17:9.03:0,9,160	0/0:21,0:11:9.87:0,10,145	0/0:13,0:13:21.07:0,21,407	0/1:5,1:6:8.12:20,0,8	1/1:8,0:8:8.93:77,9,0	./.	1/1:1,3:4:6.02:85,6,0	1/1:5,2:7:8.99:103,9,0	1/1:7,3:10:21.06:277,21,0	1/1:5,0:5:3:25,3,0	0/0:5,0:5:3.01:0,3,60	0/0:5,0:5:6.02:0,6,98	1/1:1,4:5:9.03:120,9,0	0/1:4,1:5:3.27:46,0,3	1/1:6,6:12:9.83:119,10,0	1/1:11,3:13:23.33:186,23,0	1/1:11,1:12:18.05:227,18,0	1/1:3,0:3:3.01:43,3,0	1/1:6,4:8:12.03:152,12,0	1/1:3,2:5:11.64:79,12,0	1/1:4,1:5:3:27,3,0	1/1:5,0:5:5.60:40,6,0	1/1:6,0:6:3.01:34,3,0	1/1:2,2:4:9.03:118,9,0	1/1:4,4:8:6.02:82,6,0	1/1:5,0:5:9.03:128,9,0
chr10	56083188	.	T	TTC	957.55	PASS	AB=0.676;AC=19;AF=0.365;AN=52;BaseQRankSum=0.313;DP=255;FS=5.497;HRun=0;HaplotypeScore=44.6544;InbreedingCoeff=0.5938;MQ=42.54;MQ0=30;MQRankSum=-1.075;QD=12.44;ReadPosRankSum=0.407;VQSLOD=2.6322;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:30:47.57:0,48,432	./.	0/0:27,0:9:13.57:0,14,73	0/0:26,0:5:0.91:0,1,30	0/0:12,0:11:15.05:0,15,207	0/0:11,0:10:15.50:0,15,126	0/0:7,0:7:10.11:0,10,49	./.	1/1:3,0:1:2.60:10,3,0	0/1:3,3:6:42.57:115,0,43	1/1:4,5:11:12.11:108,12,0	0/0:8,0:7:11.71:0,12,69	0/0:5,0:4:8.98:0,9,92	0/0:4,0:4:11.95:0,12,107	1/1:1,3:6:12.03:156,12,0	0/0:4,0:4:8.80:0,9,57	0/0:12,0:7:17.95:0,18,176	0/0:9,0:6:11.65:0,12,70	1/1:8,2:6:17.21:154,17,0	1/1:0,2:3:2.94:18,3,0	0/1:4,5:7:1.93:143,0,2	0/0:3,0:3:6.01:0,6,61	0/0:7,0:6:11.77:0,12,74	0/0:6,0:4:0:0,0,0	1/1:5,0:3:5.90:44,6,0	1/1:6,6:12:23.69:242,24,0	1/1:4,2:6:11.85:100,12,0	0/1:2,1:2:3.97:41,0,4
chr10	56083199	.	C	CT	343.44	PASS	AB=0.712;AC=12;AF=0.261;AN=46;BaseQRankSum=-0.124;DP=215;FS=0.000;HRun=9;HaplotypeScore=38.7844;InbreedingCoeff=0.5293;MQ=37.78;MQ0=37;MQRankSum=-2.956;QD=7.01;ReadPosRankSum=1.520;VQSLOD=0.0665;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:31:11.04:0,11,215	./.	0/0:10,0:4:2.98:0,3,25	./.	0/0:11,0:10:11.99:0,12,104	0/1:5,6:10:7.52:149,0,8	1/1:3,3:6:3.01:33,3,0	./.	./.	0/0:6,0:6:8.99:0,9,78	0/0:10,0:10:8.95:0,9,74	1/1:3,4:6:6.02:66,6,0	0/0:4,0:3:9:0,9,78	0/0:6,0:6:15:0,15,130	0/0:7,0:7:11.99:0,12,104	./.	0/0:11,0:4:2.99:0,3,26	1/1:4,3:5:6.02:66,6,0	0/0:8,0:3:6:0,6,52	0/0:7,0:7:6.46:0,6,53	0/0:9,0:5:9:0,9,78	1/1:2,1:3:6.02:65,6,0	1/1:4,4:7:9.02:99,9,0	0/1:5,2:3:0:0,0,0	0/0:5,0:4:8.99:0,9,78	0/0:12,0:7:14.98:0,15,130	0/0:9,0:8:14.99:0,15,129	0/0:2,0:1:3:0,3,26
chr10	56084566	.	T	TTGTGTGTG	5044.02	PASS	AB=1.000;AC=41;AF=0.820;AN=50;BaseQRankSum=-3.297;DP=626;FS=0.000;HRun=0;HaplotypeScore=171.8581;InbreedingCoeff=0.5400;MQ=57.95;MQ0=22;MQRankSum=-1.568;QD=10.40;ReadPosRankSum=-1.902;VQSLOD=3.6379;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:44:30.45:0,30,567	./.	./.	0/1:45,0:20:0:0,0,0	0/0:25,0:25:18.06:0,18,408	1/1:5,7:18:8.06:192,8,0	1/1:26,0:25:2.94:319,3,0	./.	1/1:14,3:26:3.01:122,3,0	1/1:13,4:23:26.93:517,27,0	1/1:17,0:16:5.97:115,6,0	1/1:20,1:21:8.99:239,9,0	0/0:19,0:19:18.50:0,19,350	0/0:16,0:17:2.04:0,2,349	1/1:28,0:28:17.23:430,17,0	1/1:12,3:19:2.97:122,3,0	1/1:18,4:30:6.49:230,6,0	1/1:13,0:13:6.02:217,6,0	1/1:16,0:16:4.26:69,4,0	1/1:15,0:14:9.03:214,9,0	1/1:33,0:31:24.48:488,24,0	1/1:22,0:22:2.21:68,2,0	1/1:17,0:16:17.98:314,18,0	1/1:14,2:20:6.02:207,6,0	1/1:14,0:13:6:128,6,0	1/1:34,0:30:33.78:558,34,0	1/1:22,5:42:10.85:372,11,0	1/1:3,1:5:3.01:122,3,0
chr10	56085899	.	TCTGTCTGTCTGTCTGTCTGC	T	14104.97	PASS	AB=0.585;AC=39;AF=0.722;AN=54;BaseQRankSum=12.590;DP=502;FS=0.480;HRun=0;HaplotypeScore=245.4750;InbreedingCoeff=0.7994;MQ=51.56;MQ0=8;MQRankSum=-2.994;QD=38.12;ReadPosRankSum=0.744;VQSLOD=3.4248;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,116,6516	./.	0/0:18,0:11:12.89:0,13,314	0/0:27,0:10:17.21:0,17,446	0/0:16,0:15:36.07:0,36,1936	1/1:12,1:13:29.57:679,30,0	1/1:9,0:9:18.06:322,18,0	0/0:1,0:1:3.01:0,3,45	1/1:1,12:13:3.01:164,3,0	1/1:2,25:26:65.74:1225,66,0	1/1:2,22:24:11.99:510,12,0	1/1:9,5:14:30.03:1014,30,0	0/0:9,0:9:23.70:0,24,1546	0/0:15,0:15:42.12:0,42,2927	1/1:1,17:18:12.04:654,12,0	1/1:10,4:14:36.09:1097,36,0	1/1:23,1:24:38.68:698,39,0	1/1:9,1:10:17.99:401,18,0	1/1:9,20:28:57.06:1132,57,0	1/1:7,14:21:17.99:836,18,0	1/1:7,21:28:9.03:490,9,0	1/1:1,7:8:6.02:324,6,0	1/1:10,2:12:29.90:571,30,0	1/1:11,2:13:19.93:418,20,0	1/1:1,14:16:12.04:655,12,0	1/1:3,32:35:93.05:1950,93,0	0/1:7,17:24:1.52:800,0,2	1/1:2,16:18:3.01:164,3,0
chr10	56085917	.	TGC	T	1638.12	PASS	AB=0.927;AC=28;AF=0.519;AN=54;BaseQRankSum=11.631;DP=467;FS=4.434;HRun=0;HaplotypeScore=143.4466;InbreedingCoeff=-0.0071;MQ=53.89;MQ0=6;MQRankSum=-9.154;QD=4.92;ReadPosRankSum=5.561;VQSLOD=2.4780;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,131,2477	./.	0/0:12,0:7:20.99:0,21,362	0/0:26,1:17:7.51:0,8,734	0/0:25,0:24:69.24:0,69,1373	0/1:13,3:16:99:145,0,107	0/1:11,1:11:25.58:26,0,117	0/0:1,0:1:2.90:0,3,16	1/1:12,0:12:3:28,3,0	0/1:26,0:25:96.53:107,0,97	0/1:22,0:22:12.02:50,0,12	0/1:11,2:13:68.88:87,0,69	0/0:9,0:9:27.09:0,27,518	0/0:15,0:15:45.15:0,45,910	1/1:17,0:17:11.69:89,12,0	0/1:10,3:13:55.66:195,0,56	0/1:17,4:21:99:222,0,152	0/1:10,1:11:43.57:44,0,83	0/1:20,0:19:42.96:43,0,186	1/1:14,0:14:14.87:140,15,0	1/1:21,0:21:9.02:102,9,0	1/1:9,0:9:5.69:45,6,0	0/1:12,1:13:36.07:89,0,36	0/1:13,0:13:16.65:17,0,24	1/1:15,0:15:11.53:73,12,0	0/1:32,0:32:99:211,0,272	1/1:17,0:17:14.32:87,14,0	1/1:16,0:16:2.84:14,3,0
chr10	56085974	.	A	ATTT	7369.83	PASS	AB=1.000;AC=19;AF=0.365;AN=52;BaseQRankSum=-4.301;DP=498;FS=1.284;HRun=9;HaplotypeScore=101.5083;InbreedingCoeff=0.8752;MQ=69.92;MQ0=0;MQRankSum=-4.657;QD=41.17;ReadPosRankSum=1.723;VQSLOD=4.8937;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:55.06:0,55,1140	./.	0/0:9,0:9:21.01:0,21,228	0/1:11,0:9:16.59:17,0,159	0/0:23,0:23:63.18:0,63,781	1/1:2,20:24:66.20:1249,66,0	1/1:3,13:19:39.11:702,39,0	./.	0/0:16,0:16:21.07:0,21,265	0/0:25,0:25:69.22:0,69,871	0/0:23,0:23:42.05:0,42,530	1/1:2,20:23:57.17:1086,57,0	0/0:7,0:7:18.03:0,18,227	0/0:19,0:20:51.05:0,51,609	0/0:13,0:13:27.09:0,27,341	1/1:6,10:20:7.16:646,7,0	1/1:5,15:22:48.14:910,48,0	1/1:1,16:18:48.16:923,48,0	0/0:31,0:31:69.13:0,69,857	0/0:22,0:22:57.18:0,57,720	0/0:13,0:13:18.06:0,18,227	1/1:4,3:7:9.03:177,9,0	1/1:1,14:17:51.15:966,51,0	1/1:2,15:18:36.12:694,36,0	0/0:19,0:19:30.09:0,30,379	0/0:28,0:28:63.16:0,63,791	0/0:20,0:20:27.08:0,27,341	0/0:11,0:11:6.02:0,6,74
chr10	56088071	.	GTTTCTCTCTCTC	G	1751.73	PASS	AB=1.000;AC=12;AF=0.214;AN=56;BaseQRankSum=2.590;DP=609;FS=1.193;HRun=0;HaplotypeScore=205.4439;InbreedingCoeff=0.0987;MQ=65.67;MQ0=9;MQRankSum=-3.765;QD=9.03;ReadPosRankSum=-0.726;VQSLOD=2.5444;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:37:94.23:0,94,2346	1/1:0,5:5:2.67:104,3,0	0/0:28,0:15:27.07:0,27,307	0/0:40,0:20:23.29:0,23,320	0/0:23,0:23:69.10:0,69,1412	0/1:17,0:16:42.74:43,0,279	0/1:21,0:21:22.90:23,0,426	1/1:28,0:28:78.38:682,78,0	0/0:22,0:21:54.49:0,54,682	0/0:19,0:19:57.10:0,57,963	0/0:25,0:25:67.30:0,67,1149	0/1:18,0:18:99:275,0,265	0/0:17,0:17:41.92:0,42,873	0/0:19,0:19:55.19:0,55,1517	0/0:20,0:20:56.17:0,56,761	0/1:20,0:20:99:509,0,207	0/1:22,0:22:99:105,0,335	0/0:14,0:14:41.85:0,42,359	0/0:19,0:18:54.05:0,54,734	0/0:22,0:22:62.87:0,63,917	0/0:21,0:21:52.33:0,52,904	0/1:30,0:30:85.65:86,0,523	0/0:23,0:23:35.11:0,35,578	0/1:25,0:25:70.69:71,0,257	0/0:19,0:19:41.20:0,41,576	0/0:31,0:31:90.16:0,90,1588	0/0:15,0:15:42.05:0,42,596	0/1:8,0:8:10.81:11,0,237
chr10	56088073	.	TTCTCTCTCTCTC	T	1951.28	PASS	AB=0.853;AC=18;AF=0.346;AN=52;BaseQRankSum=7.967;DP=631;FS=2.425;HRun=0;HaplotypeScore=208.8134;InbreedingCoeff=0.5100;MQ=64.82;MQ0=11;MQRankSum=-7.361;QD=9.25;ReadPosRankSum=-0.848;VQSLOD=2.2792;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:42:51.17:0,51,2347	1/1:6,0:6:0.82:83,1,0	./.	0/0:40,0:20:1.41:0,1,3	0/0:23,0:23:30.10:0,30,1015	1/1:15,4:18:3.01:103,3,0	1/1:18,3:21:3.01:103,3,0	./.	0/0:20,0:22:17.91:0,18,299	0/0:21,0:21:30.10:0,30,612	0/0:20,0:26:26.80:0,27,690	1/1:13,4:19:15.05:424,15,0	0/0:20,0:21:22.43:0,22,762	0/0:20,0:21:27.09:0,27,1298	0/0:15,0:19:21.94:0,22,376	1/1:11,7:19:21.07:700,21,0	0/1:18,0:23:30.24:203,0,30	0/0:14,0:14:3.01:0,3,39	0/0:19,0:18:15.01:0,15,282	0/0:20,0:23:24.08:0,24,481	0/0:22,0:21:27.09:0,27,486	1/1:26,4:30:15.01:276,15,0	0/1:21,0:23:28.53:29,0,112	1/1:18,1:26:10.15:161,10,0	0/0:11,0:19:15.68:0,16,281	0/0:30,0:30:42.14:0,42,851	0/1:15,0:15:3.47:3,0,250	0/1:5,0:9:36.66:37,0,108
chr10	56088594	.	CAGCCA	C	9018.60	PASS	AB=0.515;AC=21;AF=0.375;AN=56;BaseQRankSum=17.036;DP=516;FS=2.625;HRun=0;HaplotypeScore=155.6443;InbreedingCoeff=0.9162;MQ=88.23;MQ0=0;MQRankSum=-16.745;QD=63.96;ReadPosRankSum=5.742;VQSLOD=5.8196;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,114,3426	1/1:0,4:4:12.04:270,12,0	0/0:24,0:24:71.73:0,72,2037	0/0:20,0:20:56.64:0,57,1356	0/0:12,0:12:36.11:0,36,1039	1/1:0,17:17:51.18:1136,51,0	1/1:2,14:16:48.16:1049,48,0	1/1:0,11:11:33.11:733,33,0	0/0:19,0:19:57.20:0,57,1876	0/0:21,0:21:60.21:0,60,1872	0/0:8,0:8:24.07:0,24,721	1/1:0,17:17:51.18:1122,51,0	0/0:34,0:34:99:0,102,3362	0/0:25,0:25:75.26:0,75,2498	0/0:33,0:33:99:0,99,3274	0/1:1,16:17:48.78:1027,0,49	1/1:3,4:7:15.01:288,15,0	1/1:0,13:13:39.13:899,39,0	0/0:24,0:24:66.23:0,66,2016	0/0:17,0:17:42.14:0,42,1247	0/0:32,0:32:93.32:0,93,2968	1/1:0,17:17:51.18:1129,51,0	1/1:0,13:13:39.13:828,39,0	1/1:1,8:9:27.05:537,27,0	0/0:15,0:15:42.14:0,42,1329	0/0:18,0:18:51.16:0,51,1507	0/0:26,0:26:78.27:0,78,2595	0/0:9,0:9:27.09:0,27,899
chr10	56088602	.	G	GAAAA	7898.27	PASS	AB=0.529;AC=21;AF=0.375;AN=56;BaseQRankSum=16.916;DP=514;FS=3.193;HRun=1;HaplotypeScore=152.9914;InbreedingCoeff=0.9347;MQ=86.45;MQ0=0;MQRankSum=-16.781;QD=57.23;ReadPosRankSum=5.592;VQSLOD=4.7945;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,99,1897	1/1:0,4:4:12.04:242,12,0	0/0:25,0:25:69.85:0,70,1139	0/0:16,0:16:48.15:0,48,775	0/0:14,0:14:39.13:0,39,756	1/1:0,17:17:51.18:1012,51,0	1/1:0,14:14:42.14:811,42,0	1/1:0,10:10:30.10:618,30,0	0/0:22,0:22:66.20:0,66,1259	0/0:26,0:26:78.25:0,78,1434	0/0:8,0:8:18.06:0,18,354	1/1:0,17:17:51.17:977,51,0	0/0:35,0:35:99:0,102,1972	0/0:27,0:27:75.23:0,75,1392	0/0:35,0:35:99:0,105,1990	0/1:2,16:18:4.73:974,0,5	1/1:1,4:5:15.05:276,15,0	1/1:0,13:13:39.13:872,39,0	0/0:22,0:22:57.18:0,57,1050	0/0:14,0:14:39.12:0,39,732	0/0:31,0:31:84.25:0,84,1568	1/1:1,17:18:51.17:987,51,0	1/1:2,12:14:39.13:693,39,0	1/1:0,8:8:24.08:437,24,0	0/0:15,0:15:42.13:0,42,769	0/0:15,0:15:42.13:0,42,775	0/0:28,0:28:78.27:0,78,1530	0/0:9,0:9:27.09:0,27,530
chr10	56088604	.	CGG	C	4202.32	PASS	AB=0.543;AC=21;AF=0.375;AN=56;BaseQRankSum=16.937;DP=537;FS=4.311;HRun=2;HaplotypeScore=143.4109;InbreedingCoeff=0.9182;MQ=88.72;MQ0=0;MQRankSum=-17.092;QD=29.80;ReadPosRankSum=5.774;VQSLOD=3.7181;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,108,2128	1/1:1,4:5:15.04:171,15,0	0/0:28,0:28:80.70:0,81,1432	0/0:18,0:18:54.15:0,54,1012	0/0:16,0:16:45.15:0,45,865	1/1:0,17:17:51.12:531,51,0	1/1:0,14:14:42.07:428,42,0	1/1:1,10:11:33:353,33,0	0/0:22,0:22:66.23:0,66,1324	0/0:28,0:28:84.29:0,84,1676	0/0:10,0:10:23.76:0,24,457	1/1:0,17:17:51.10:528,51,0	0/0:36,0:36:99:0,108,2131	0/0:25,0:25:75.26:0,75,1521	0/0:36,0:36:99:0,108,2172	0/1:3,16:19:56.51:469,0,57	1/1:1,4:5:14.83:139,15,0	1/1:0,13:13:39.11:437,39,0	0/0:22,0:22:60.20:0,60,1176	0/0:16,0:16:45.14:0,45,863	0/0:30,0:30:84.29:0,84,1653	1/1:0,18:18:51.11:526,51,0	1/1:0,14:14:38.97:374,39,0	1/1:0,8:8:24.05:246,24,0	0/0:19,0:19:54.17:0,54,1018	0/0:16,0:16:45.14:0,45,860	0/0:27,0:27:81.28:0,81,1641	0/0:11,0:11:33.11:0,33,638
chr10	56090078	.	CTT	C	1428.64	PASS	AB=0.732;AC=27;AF=0.482;AN=56;BaseQRankSum=-0.423;DP=524;FS=7.084;HRun=16;HaplotypeScore=77.2753;InbreedingCoeff=0.4556;MQ=68.77;MQ0=10;MQRankSum=-0.005;QD=4.55;ReadPosRankSum=4.257;VQSLOD=-0.7568;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:43:79:0,79,890	1/1:3,0:13:16.40:70,16,0	0/1:20,0:14:4.48:4,0,91	0/0:12,0:10:10.17:0,10,93	0/0:28,0:34:34.79:0,35,510	1/1:2,9:11:23.95:201,24,0	1/1:4,20:25:7.95:223,8,0	1/1:10,0:32:19.34:138,19,0	0/0:8,0:17:13.16:0,13,75	0/0:8,0:19:3.40:0,3,105	0/1:2,1:10:4.44:4,0,48	1/1:7,2:9:5.86:46,6,0	0/0:19,0:19:47.72:0,48,478	0/0:8,0:10:20.70:0,21,155	0/0:7,0:13:9.13:0,9,34	0/1:7,11:18:4.24:84,0,4	1/1:3,16:23:32.08:278,32,0	1/1:9,10:17:17.57:137,18,0	0/1:10,2:21:27.79:28,0,61	0/1:8,0:10:0.45:0,0,65	0/0:8,0:10:13.92:0,14,48	1/1:11,4:18:3.06:103,3,0	1/1:10,10:19:2.94:87,3,0	1/1:12,6:17:25.01:188,25,0	0/1:7,1:20:17.61:18,0,48	0/1:19,1:23:7.43:7,0,116	0/0:11,0:12:2.70:0,3,121	0/0:6,0:16:24.06:0,24,86
chr10	56090197	.	TGTATCATTCG	T	10517.42	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=14.620;DP=562;FS=2.323;HRun=0;HaplotypeScore=164.9903;InbreedingCoeff=0.9978;MQ=77.87;MQ0=1;MQRankSum=-15.109;QD=74.07;ReadPosRankSum=0.754;VQSLOD=4.9757;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,114,6060	0/0:8,0:8:24.07:0,24,1175	0/0:19,0:19:57.20:0,57,2650	0/0:17,0:16:31.68:0,32,1870	0/0:31,0:31:93.30:0,93,4816	1/1:0,24:24:54.19:1858,54,0	1/1:0,11:10:24.08:832,24,0	0/0:21,0:21:60.21:0,60,2800	0/0:23,0:23:69.24:0,69,3483	0/0:19,0:19:57.19:0,57,2569	0/0:12,0:12:36.12:0,36,1580	1/1:0,12:12:27.09:929,27,0	0/0:19,0:19:57.18:0,57,2823	0/0:16,0:16:48.13:0,48,2324	0/0:17,0:17:51.18:0,51,2360	1/1:0,30:30:75.26:2596,75,0	1/1:0,10:10:24.08:775,24,0	1/1:0,12:12:30.10:1047,30,0	0/0:19,0:19:57.17:0,57,2676	0/0:27,0:27:81.22:0,81,3365	0/0:56,0:56:99:0,160,7967	1/1:0,12:12:27.09:876,27,0	1/1:0,12:12:27.09:832,27,0	1/1:0,19:19:24.08:772,24,0	0/0:26,0:26:78.23:0,78,3633	0/0:27,0:27:78.26:0,78,3833	0/0:17,0:17:51.18:0,51,2766	0/0:8,0:8:24.08:0,24,1261
chr10	56090939	.	A	ATGT	9272.30	PASS	AB=0.690;AC=21;AF=0.375;AN=56;BaseQRankSum=-14.222;DP=622;FS=5.631;HRun=0;HaplotypeScore=124.0150;InbreedingCoeff=0.8536;MQ=77.97;MQ0=0;MQRankSum=3.977;QD=34.22;ReadPosRankSum=0.776;VQSLOD=5.2918;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,111,1487	1/1:0,3:3:9.03:180,9,0	0/0:31,0:30:32.77:0,33,426	0/0:34,0:34:38.14:0,38,497	0/0:23,0:23:45.09:0,45,574	1/1:8,18:26:51.17:1000,51,0	1/1:9,16:27:42.14:842,42,0	1/1:13,19:33:21.22:1031,21,0	0/0:2,0:20:33.34:0,33,219	0/0:5,0:33:53.47:0,53,372	0/0:6,0:13:13.72:0,14,89	1/1:10,14:24:39.13:781,39,0	0/0:16,0:16:45.13:0,45,607	0/0:18,0:18:33.09:0,33,445	0/0:6,0:20:25.84:0,26,173	0/1:11,9:20:30.84:488,0,31	1/1:13,26:39:46.72:1261,47,0	1/1:9,19:28:51.18:1023,51,0	0/0:5,0:13:11.89:0,12,88	0/0:2,0:11:14.88:0,15,105	0/0:8,0:16:2.98:0,3,21	1/1:7,6:13:24.07:445,24,0	1/1:6,9:15:27.56:509,28,0	1/1:17,26:43:90.28:1711,90,0	0/0:1,0:12:17.86:0,18,126	0/0:5,0:20:38.69:0,39,273	0/0:7,0:19:26.78:0,27,189	0/0:3,0:6:2.98:0,3,21
chr10	56091027	.	G	GTC	6409.87	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-11.086;DP=481;FS=8.375;HRun=0;HaplotypeScore=67.5295;InbreedingCoeff=0.9905;MQ=82.68;MQ0=0;MQRankSum=-3.031;QD=46.79;ReadPosRankSum=2.649;VQSLOD=5.9305;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:72.24:0,72,1007	0/0:7,0:7:18.06:0,18,252	0/0:24,0:24:66.21:0,66,900	0/0:21,0:21:57.18:0,57,773	0/0:22,0:22:66.22:0,66,921	1/1:1,17:18:48.16:864,48,0	1/1:2,9:12:27.09:486,27,0	0/0:17,0:17:45.13:0,45,599	0/0:12,0:12:24.08:0,24,336	0/0:29,0:28:75.23:0,75,1031	0/0:13,0:13:33.11:0,33,462	1/1:1,12:13:36.12:647,36,0	0/0:13,0:13:39.13:0,39,546	0/0:16,0:16:48.16:0,48,672	0/0:26,0:26:60.20:0,60,839	1/1:2,16:18:48.16:864,48,0	1/1:5,19:24:54.19:966,54,0	1/1:0,12:12:36.12:648,36,0	0/0:14,0:14:39.13:0,39,546	0/0:10,0:10:30.10:0,30,419	0/0:20,0:20:48.14:0,48,653	1/1:0,11:12:30.10:540,30,0	1/1:1,4:5:15.05:263,15,0	1/1:0,23:23:63.22:1133,63,0	0/0:13,0:13:27.09:0,27,378	0/0:22,0:22:66.22:0,66,924	0/0:29,0:29:78.26:0,78,1092	0/0:4,0:4:12.04:0,12,168
chr10	56091291	.	TGGTG	T	959.59	PASS	AB=0.847;AC=11;AF=0.229;AN=48;BaseQRankSum=-1.008;DP=210;FS=6.146;HRun=0;HaplotypeScore=37.8587;InbreedingCoeff=0.3328;MQ=42.57;MQ0=27;MQRankSum=1.893;QD=10.66;ReadPosRankSum=1.158;VQSLOD=1.3807;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:9,0:9:15.71:16,0,308	0/0:5,0:4:6:0,6,63	./.	./.	0/0:3,0:3:3.01:0,3,40	0/0:2,2:4:1.82:0,2,5	1/1:14,0:9:13.01:288,13,0	0/0:14,0:11:9.40:0,9,56	0/0:8,0:8:5.99:0,6,87	0/0:4,0:3:5.74:0,6,127	./.	1/1:6,0:5:7.30:136,7,0	0/0:12,0:9:22.47:0,22,355	0/0:11,0:11:23.13:0,23,364	0/0:7,0:6:10.64:0,11,112	0/0:5,0:2:0.89:0,1,2	0/1:7,16:22:58.47:58,0,62	1/1:15,0:11:13.91:297,14,0	0/0:5,0:3:6.01:0,6,87	0/0:2,0:2:4.81:0,5,28	0/0:13,0:9:12.03:0,12,234	0/0:3,0:3:0:0,0,0	./.	0/1:18,0:17:33.20:294,0,33	1/1:2,0:1:1.82:5,2,0	0/0:8,0:5:5.89:0,6,102	0/0:1,0:1:3.01:0,3,32	0/0:5,0:3:9.03:0,9,152
chr10	56091522	.	CGTGT	C	90.29	PASS	AB=0.769;AC=9;AF=0.196;AN=46;BaseQRankSum=2.011;DP=556;FS=14.014;HRun=0;HaplotypeScore=89.2320;InbreedingCoeff=0.4770;MQ=65.79;MQ0=22;MQRankSum=-0.621;QD=0.79;ReadPosRankSum=-0.687;VQSLOD=0.8379;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:37:32.74:0,33,427	0/0:3,0:3:0.47:0,0,1	./.	./.	0/0:10,0:10:9:0,9,98	./.	1/1:20,3:24:5.46:73,5,0	0/0:29,0:28:4.11:0,4,11	0/0:22,0:22:12.48:0,12,147	0/0:11,0:11:12.03:0,12,226	0/0:6,0:6:9.03:0,9,169	./.	0/0:17,0:17:15.96:0,16,192	0/0:23,0:22:18.01:0,18,236	0/0:18,0:24:11.94:0,12,147	1/1:11,8:17:3:46,3,0	1/1:26,0:27:3:25,3,0	0/1:14,0:20:13.19:21,0,13	0/0:14,0:12:6.49:0,6,119	0/0:12,0:12:9.03:0,9,138	0/0:53,0:51:42.14:0,42,818	0/0:8,0:8:2.68:0,3,11	./.	1/1:18,6:23:3.01:46,3,0	0/0:10,0:10:9.03:0,9,138	0/0:15,0:14:13.29:0,13,192	0/0:11,0:11:17.78:0,18,248	0/0:5,0:3:3.01:0,3,49
chr10	56094087	.	G	GA	6251.86	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-12.261;DP=577;FS=2.555;HRun=9;HaplotypeScore=64.1681;InbreedingCoeff=0.9820;MQ=85.12;MQ0=2;MQRankSum=-0.951;QD=25.01;ReadPosRankSum=-1.466;VQSLOD=5.1416;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:77.94:0,78,673	1/1:1,7:8:12.03:133,12,0	0/0:42,0:32:34.64:0,35,322	0/0:31,0:25:35.19:0,35,253	0/0:23,0:24:65.01:0,65,552	0/0:21,0:21:62.98:0,63,543	0/0:17,0:17:44.96:0,45,384	1/1:1,24:25:69.11:724,69,0	1/1:6,13:20:18.92:420,19,0	1/1:4,23:28:72.01:768,72,0	1/1:3,16:19:45.04:470,45,0	0/0:24,0:24:65.98:0,66,573	0/0:11,0:11:29.98:0,30,260	0/0:15,0:15:38.94:0,39,331	1/1:3,14:19:35.76:360,36,0	0/0:14,0:14:41.99:0,42,365	0/0:26,0:26:74.42:0,74,643	0/0:22,0:22:53.95:0,54,463	1/1:3,23:26:69.13:729,69,0	1/1:2,26:28:72.66:791,73,0	1/1:3,4:8:12.03:133,12,0	0/0:16,0:16:38.97:0,39,335	0/0:17,0:17:41.99:0,42,364	0/0:18,0:18:41.98:0,42,364	1/1:3,16:19:22.08:472,22,0	1/1:4,18:22:57.14:622,57,0	1/1:2,21:23:48.13:531,48,0	1/1:1,4:5:9.02:99,9,0
chr10	56094756	.	GGT	G	1104.96	PASS	AB=0.918;AC=19;AF=0.339;AN=56;BaseQRankSum=6.012;DP=654;FS=11.201;HRun=0;HaplotypeScore=128.2663;InbreedingCoeff=0.0645;MQ=63.70;MQ0=15;MQRankSum=-1.901;QD=2.61;ReadPosRankSum=2.707;VQSLOD=2.0506;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:8.60:0,9,584	1/1:9,2:11:8.83:67,9,0	0/0:40,0:21:14.15:0,14,149	0/1:42,0:18:54.78:55,0,69	0/0:11,0:10:18.03:0,18,241	0/1:18,1:20:3.68:83,0,4	1/1:39,2:41:2.85:205,3,0	0/1:19,9:28:17.94:180,0,18	0/0:20,0:20:27.04:0,27,327	0/0:21,0:21:41.37:0,41,465	0/0:13,0:12:11.72:0,12,152	0/1:32,2:33:25.38:129,0,25	0/1:13,0:13:39.57:40,0,323	0/0:12,0:11:21.07:0,21,301	0/0:14,0:14:32.76:0,33,454	0/1:18,0:19:22.52:97,0,23	0/1:20,11:31:27.43:27,0,31	0/1:24,1:25:29.18:184,0,29	0/0:17,0:17:18.73:0,19,386	0/0:10,0:9:11.87:0,12,137	0/1:75,0:73:6.76:7,0,1490	0/1:13,7:19:0:0,0,0	1/1:20,0:20:2.25:107,2,0	1/1:29,1:30:0.14:64,0,0	0/1:10,0:9:18.10:18,0,201	0/0:24,0:23:41.38:0,41,607	0/0:11,0:11:21.06:0,21,285	0/0:14,0:14:24.08:0,24,348
chr10	56094775	.	A	ATG	893.58	PASS	AB=0.998;AC=31;AF=0.620;AN=50;BaseQRankSum=-1.291;DP=642;FS=8.117;HRun=0;HaplotypeScore=133.3315;InbreedingCoeff=0.2517;MQ=47.22;MQ0=27;MQRankSum=0.090;QD=1.99;ReadPosRankSum=1.505;VQSLOD=1.8639;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:31:2.95:0,3,32	./.	./.	./.	0/0:14,0:12:5.91:0,6,46	1/1:22,0:19:3.27:14,3,0	1/1:41,0:39:0.47:1,0,0	0/1:24,0:24:0:0,0,0	1/1:20,0:20:5.98:58,6,0	0/1:15,0:15:23.06:52,0,23	0/0:9,1:9:0.42:0,0,1	1/1:41,0:40:5.31:44,5,0	0/0:20,0:20:22.34:0,22,197	0/0:15,0:13:2.90:0,3,16	1/1:15,1:16:9.27:103,9,0	1/1:22,0:22:3.32:45,3,0	1/1:27,0:26:0.41:1,0,0	0/0:24,0:22:0.04:0,0,2	0/1:13,0:12:4.46:31,0,4	1/1:11,0:9:5.06:21,5,0	0/1:82,0:80:12.59:296,0,13	0/0:22,0:19:0.45:0,0,1	1/1:19,0:19:2.58:13,3,0	1/1:34,0:31:2.33:12,2,0	1/1:14,0:13:11.47:85,11,0	0/1:27,0:26:2.48:84,0,2	1/1:10,0:10:9.03:117,9,0	1/1:7,2:9:3.01:44,3,0
chr10	56095165	.	A	AG	1100.57	PASS	AB=0.841;AC=31;AF=0.574;AN=54;BaseQRankSum=-0.213;DP=414;FS=2.450;HRun=11;HaplotypeScore=82.3277;InbreedingCoeff=0.2216;MQ=82.83;MQ0=2;MQRankSum=-2.146;QD=3.61;ReadPosRankSum=-0.434;VQSLOD=0.5739;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:23.79:0,24,177	0/0:4,0:4:8.96:0,9,70	0/1:35,0:25:7.15:7,0,76	0/1:21,0:17:9.40:9,0,84	0/0:11,0:12:4.98:0,5,29	1/1:5,2:7:9:85,9,0	0/1:15,1:17:45.68:108,0,46	0/0:17,0:20:19.05:0,19,123	1/1:3,9:13:6.01:61,6,0	0/0:5,2:7:5.97:0,6,46	1/1:7,2:9:5.99:51,6,0	1/1:9,8:17:9.02:91,9,0	0/1:9,0:10:2.66:3,0,78	0/0:17,1:19:16.88:0,17,122	0/1:13,12:25:13.75:52,0,14	0/1:3,7:10:9.64:79,0,10	1/1:11,17:29:18.03:182,18,0	0/1:9,3:13:67.42:67,0,92	1/1:11,5:16:8.97:76,9,0	0/1:11,0:11:0.80:20,0,1	./.	1/1:3,8:12:9:84,9,0	1/1:7,0:7:5.99:48,6,0	0/0:7,5:12:2.98:0,3,23	1/1:8,2:10:3.01:30,3,0	0/1:10,8:18:11.21:79,0,11	1/1:6,10:16:9.02:91,9,0	1/1:7,0:7:5.99:48,6,0
chr10	56095388	.	A	AC	5711.32	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-7.378;DP=623;FS=20.247;HRun=3;HaplotypeScore=77.1997;InbreedingCoeff=0.9978;MQ=82.46;MQ0=6;MQRankSum=-0.044;QD=29.29;ReadPosRankSum=1.682;VQSLOD=3.1798;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:96.23:0,96,1107	1/1:1,9:10:24.05:314,24,0	0/0:64,0:42:90.45:0,90,787	0/0:51,0:30:53.96:0,54,584	0/0:18,0:18:30.27:0,30,540	1/1:1,12:13:24.08:315,24,0	1/1:1,11:12:24.55:317,25,0	1/1:4,29:33:87.11:989,87,0	0/0:18,0:18:48.04:0,48,532	0/0:27,0:27:77.91:0,78,809	0/0:12,0:12:36.02:0,36,406	1/1:1,15:16:39.13:513,39,0	0/0:18,0:18:45.12:0,45,524	0/0:19,0:19:51.13:0,51,595	0/0:26,0:26:75.07:0,75,810	1/1:2,14:16:46.68:579,47,0	1/1:1,17:18:39.13:513,39,0	1/1:0,10:10:21.07:276,21,0	0/0:19,0:19:53.94:0,54,563	0/0:18,0:18:48.13:0,48,561	0/0:7,0:7:21.05:0,21,240	1/1:2,29:31:76.34:945,76,0	1/1:0,11:12:32.77:363,33,0	1/1:2,22:24:45.15:589,45,0	0/0:24,0:24:65.91:0,66,694	0/0:41,0:41:99:0,109,1204	0/0:19,0:19:54.15:0,54,632	0/0:13,0:13:38.95:0,39,427
chr10	56097297	.	AT	A	6245.20	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=12.143;DP=487;FS=1.137;HRun=6;HaplotypeScore=80.4140;InbreedingCoeff=0.9945;MQ=82.08;MQ0=0;MQRankSum=-0.290;QD=29.88;ReadPosRankSum=2.452;VQSLOD=5.5087;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:90.25:0,90,1163	0/0:13,0:13:39.06:0,39,491	0/0:23,0:23:45.73:0,46,629	0/0:7,0:7:12.04:0,12,149	0/0:19,0:19:48.14:0,48,610	0/0:10,0:10:27.09:0,27,355	0/0:17,0:17:39.08:0,39,493	0/0:30,0:30:81.24:0,81,1027	1/1:1,14:15:39.10:419,39,0	1/1:1,15:16:48.11:508,48,0	1/1:1,22:23:66.08:694,66,0	0/0:12,0:12:33.06:0,33,415	0/0:14,0:14:39.13:0,39,513	0/0:17,0:17:39.11:0,39,498	1/1:0,25:25:72.12:759,72,0	0/0:17,0:17:45.15:0,45,592	0/0:18,0:18:54.18:0,54,709	0/0:12,0:11:29.97:0,30,349	1/1:1,17:18:54.13:575,54,0	1/1:0,14:14:39.10:419,39,0	1/1:0,14:14:42.11:451,42,0	0/0:7,0:7:21.07:0,21,276	0/0:13,0:13:33.11:0,33,430	0/0:12,0:12:30.10:0,30,395	1/1:1,13:14:36.09:387,36,0	1/1:2,32:34:96.18:1004,96,0	1/1:1,20:21:60.15:644,60,0	1/1:2,13:15:36.09:387,36,0
chr10	56097503	.	C	CTT	3684.23	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=1.190;DP=506;FS=2.453;HRun=12;HaplotypeScore=73.8605;InbreedingCoeff=0.9156;MQ=64.39;MQ0=3;MQRankSum=-5.656;QD=21.17;ReadPosRankSum=-0.545;VQSLOD=3.1334;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:43:95.32:0,95,845	1/1:5,2:9:23.07:213,23,0	0/0:17,0:6:2.40:0,2,45	0/0:20,0:11:6.02:0,6,40	0/0:22,0:27:29.93:0,30,398	1/1:4,8:13:12.04:168,12,0	1/1:3,11:15:30.78:367,31,0	1/1:14,11:26:48.11:650,48,0	0/0:12,0:13:38.36:0,38,323	0/0:18,0:18:35.84:0,36,317	0/0:22,0:22:51.34:0,51,502	1/1:2,7:9:15.05:210,15,0	0/0:13,0:13:20.88:0,21,184	0/0:15,0:15:7.59:0,8,176	0/0:14,0:15:29.73:0,30,262	1/1:3,9:15:16.86:172,17,0	1/1:8,15:25:26.09:567,26,0	1/1:4,11:17:34.54:384,35,0	0/0:26,1:30:6.79:0,7,514	0/0:13,0:14:25.94:0,26,292	0/0:15,0:17:41.48:0,41,355	1/1:2,1:7:10.50:68,10,0	1/1:5,11:16:18.48:231,18,0	1/1:1,17:21:50.65:654,51,0	0/0:24,0:26:32.28:0,32,428	0/0:19,0:19:23.10:0,23,342	0/0:12,0:15:23.26:0,23,232	0/0:7,0:7:17.98:0,18,159
chr10	56098432	.	C	CA	12411.03	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-19.989;DP=802;FS=3.904;HRun=2;HaplotypeScore=73.2995;InbreedingCoeff=0.9995;MQ=82.13;MQ0=0;MQRankSum=-2.348;QD=39.78;ReadPosRankSum=3.139;VQSLOD=5.3160;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,138,1791	1/1:0,8:8:24.08:360,24,0	0/0:26,0:26:63.03:0,63,746	0/0:25,0:25:65.70:0,66,826	0/0:24,0:24:72.22:0,72,920	1/1:0,28:28:75.25:1124,75,0	1/1:0,35:36:93.30:1374,93,0	1/1:3,30:33:90.29:1325,90,0	0/0:34,1:35:51.32:0,51,1134	0/0:34,0:34:99:0,102,1323	0/0:17,0:17:45.15:0,45,584	1/1:1,34:35:90.30:1349,90,0	0/0:23,0:23:69.21:0,69,880	0/0:30,1:31:45.30:0,45,1065	0/0:40,0:40:99:0,117,1505	1/1:2,32:34:84.28:1259,84,0	1/1:2,42:44:99:1754,117,0	1/1:0,18:18:51.17:764,51,0	0/0:26,0:26:78.24:0,78,992	0/0:25,0:25:75.20:0,75,928	0/0:50,0:50:99:0,147,1893	1/1:1,22:23:63.21:943,63,0	1/1:1,13:14:33.11:495,33,0	1/1:0,39:39:99:1664,111,0	0/0:9,0:9:27.09:0,27,350	0/0:29,0:29:84.27:0,84,1091	0/0:38,0:37:99:0,108,1400	0/0:12,0:12:36.10:0,36,451
chr10	56098912	.	A	AAGTAGGGC	2541.24	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-1.697;DP=465;FS=0.000;HRun=0;HaplotypeScore=116.1382;InbreedingCoeff=0.9531;MQ=66.88;MQ0=0;MQRankSum=-7.562;QD=97.74;ReadPosRankSum=-2.181;VQSLOD=3.5631;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:78.25:0,78,2134	1/1:2,2:5:9.03:397,9,0	0/0:19,0:18:51.16:0,51,1334	0/0:13,0:12:30.10:0,30,783	0/0:16,0:16:48.16:0,48,1331	0/0:13,0:13:30.10:0,30,810	0/0:24,0:24:66.23:0,66,1827	1/1:12,9:19:54.19:2258,54,0	0/0:9,0:9:24.08:0,24,679	0/0:15,0:15:45.15:0,45,1229	0/0:6,0:6:15.05:0,15,386	0/0:18,0:18:51.18:0,51,1443	0/0:15,0:15:42.14:0,42,1181	0/0:14,0:14:33.11:0,33,889	0/0:22,0:22:60.19:0,60,1597	0/0:15,0:15:45.15:0,45,1161	0/0:26,0:26:72.25:0,72,1988	0/0:31,0:31:93.30:0,93,2546	0/0:17,0:17:48.16:0,48,1331	0/0:8,0:8:24.07:0,24,603	0/0:27,0:27:78.25:0,78,2141	0/0:7,0:7:18.06:0,18,491	0/0:12,0:12:30.10:0,30,849	0/0:23,0:23:60.21:0,60,1699	0/0:16,0:16:42.10:0,42,954	0/0:21,0:21:60.21:0,60,1680	0/0:14,0:14:42.14:0,42,1175	0/0:8,0:8:24.03:0,24,495
chr10	56099149	.	AAG	A	363.45	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=4.131;DP=536;FS=12.470;HRun=0;HaplotypeScore=68.2220;InbreedingCoeff=0.7548;MQ=62.49;MQ0=11;MQRankSum=-1.191;QD=10.10;ReadPosRankSum=-5.155;VQSLOD=0.8247;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:28:78:0,78,1066	0/1:7,0:7:0.65:71,0,1	0/0:17,0:10:21.14:0,21,218	0/0:11,0:5:13.18:0,13,126	0/0:26,0:26:71.92:0,72,952	0/0:17,0:15:42.14:0,42,623	0/0:18,0:17:37.83:0,38,469	1/1:25,4:28:6.77:388,7,0	0/0:18,0:18:53.90:0,54,624	0/0:19,0:19:39.22:0,39,564	0/0:15,0:14:36.03:0,36,472	0/0:16,0:14:38.86:0,39,431	0/0:11,0:11:30:0,30,394	0/0:19,0:19:57.16:0,57,805	0/0:23,0:22:66.09:0,66,889	0/0:15,0:15:42.08:0,42,622	0/0:30,0:30:87.19:0,87,1179	0/0:27,0:26:69.14:0,69,952	0/0:23,0:23:66.11:0,66,855	0/0:29,0:29:80.25:0,80,991	0/0:11,0:10:27.07:0,27,366	0/0:24,0:24:65.93:0,66,845	0/0:19,0:18:42.72:0,43,583	0/0:19,0:18:53.63:0,54,691	0/0:8,0:8:24.03:0,24,296	0/0:16,0:16:45.04:0,45,588	0/0:19,0:19:52.37:0,52,686	0/0:19,0:19:48.02:0,48,528
chr10	56099150	.	AG	A	526.03	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=6.240;DP=535;FS=3.956;HRun=1;HaplotypeScore=58.2891;InbreedingCoeff=0.7966;MQ=63.53;MQ0=11;MQRankSum=-3.053;QD=10.96;ReadPosRankSum=-5.789;VQSLOD=-0.6684;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:27:76.84:0,77,802	1/1:7,0:7:15.77:118,16,0	0/0:18,0:11:12.53:0,13,162	0/1:11,0:5:6.42:6,0,66	0/0:26,0:26:71.22:0,71,726	0/0:17,0:15:42.12:0,42,470	0/0:18,0:17:28.70:0,29,374	1/1:28,2:29:70.80:524,71,0	0/0:18,0:18:53.83:0,54,503	0/0:18,0:18:38.80:0,39,459	0/0:15,0:14:35.68:0,36,360	0/0:16,0:14:38.83:0,39,355	0/0:11,0:11:29.96:0,30,308	0/0:19,0:19:57.13:0,57,620	0/0:23,0:22:66.05:0,66,692	0/0:14,0:14:42.12:0,42,470	0/0:31,0:31:90.12:0,90,937	0/0:29,0:27:69.09:0,69,733	0/0:23,0:23:65.77:0,66,667	0/0:27,0:27:80.28:0,80,776	0/0:12,0:11:30.03:0,30,305	0/0:24,0:24:65.58:0,66,658	0/0:19,0:18:42.27:0,42,463	0/0:19,0:18:50.45:0,50,519	0/0:8,0:8:24.02:0,24,242	0/0:15,0:15:44.83:0,45,455	0/0:17,2:19:46.01:0,46,523	0/0:19,0:19:47.86:0,48,458
chr10	56100211	.	T	TA	916.75	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-6.978;DP=724;FS=10.888;HRun=8;HaplotypeScore=93.3478;InbreedingCoeff=0.9973;MQ=68.99;MQ0=1;MQRankSum=-0.354;QD=24.12;ReadPosRankSum=-2.649;VQSLOD=2.3897;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,1:44:70.18:0,70,944	1/1:3,11:14:30.09:346,30,0	0/0:33,0:24:33.09:0,33,302	0/0:20,0:12:20.77:0,21,167	0/0:37,0:37:99:0,102,926	0/0:22,0:22:63.02:0,63,570	0/0:23,0:24:58.59:0,59,560	1/1:4,20:24:60.18:692,60,0	0/0:27,0:27:74.91:0,75,659	0/0:34,0:34:86.50:0,87,765	0/0:34,0:34:84.02:0,84,761	0/0:21,0:21:57.02:0,57,518	0/0:25,0:25:69:0,69,620	0/0:25,0:25:72.02:0,72,654	0/0:26,0:26:66.04:0,66,604	0/0:23,0:23:60:0,60,543	0/0:21,0:21:51.02:0,51,467	0/0:27,0:27:43.48:0,43,527	0/0:21,0:21:56.97:0,57,501	0/0:33,0:33:84.04:0,84,769	0/0:16,0:16:48.01:0,48,434	0/0:26,0:26:72.02:0,72,651	0/0:23,0:23:54.02:0,54,494	0/0:23,0:23:62.97:0,63,561	0/0:28,0:28:72.02:0,72,654	0/0:28,0:28:78.04:0,78,713	0/0:28,0:28:78.04:0,78,713	0/0:17,0:17:48.02:0,48,439
chr10	56100229	.	C	CA	9041.60	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-16.721;DP=704;FS=15.829;HRun=7;HaplotypeScore=67.0304;InbreedingCoeff=0.9988;MQ=69.66;MQ0=1;MQRankSum=0.586;QD=29.36;ReadPosRankSum=0.565;VQSLOD=3.6996;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,105,1014	0/0:15,0:15:42.07:0,42,405	0/0:35,0:24:35.53:0,36,336	0/0:20,0:12:18.08:0,18,156	0/0:33,0:33:87.11:0,87,834	0/0:20,0:20:60.10:0,60,579	0/0:23,0:23:57.08:0,57,550	0/0:22,0:22:57.07:0,57,542	1/1:4,27:31:72.22:870,72,0	1/1:3,26:29:78.22:930,78,0	1/1:1,30:31:93.24:1098,93,0	0/0:21,0:21:60.08:0,60,573	0/0:19,0:19:54.07:0,54,515	0/0:23,0:23:66.06:0,66,620	1/1:4,26:30:63.19:761,63,0	0/0:22,0:22:60.05:0,60,566	0/0:19,0:19:48.01:0,48,448	0/0:19,0:19:48.55:0,49,464	1/1:4,20:24:63.18:742,63,0	1/1:3,26:29:72.22:870,72,0	1/1:0,18:19:51.02:595,51,0	0/0:21,0:21:57.09:0,57,550	0/0:19,0:19:54.08:0,54,521	0/0:27,0:27:63.09:0,63,607	1/1:3,32:35:75.23:906,75,0	1/1:1,30:31:87.25:1038,87,0	1/1:6,26:32:60.02:725,60,0	1/1:0,17:17:42.13:507,42,0
chr10	56102774	.	CGTGTGTGTGTGTGTGTGT	C	1708.90	PASS	AB=0.873;AC=14;AF=0.280;AN=50;BaseQRankSum=5.516;DP=527;FS=1.060;HRun=0;HaplotypeScore=194.7720;InbreedingCoeff=0.5019;MQ=58.91;MQ0=20;MQRankSum=-3.440;QD=10.88;ReadPosRankSum=2.117;VQSLOD=2.5644;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:22:12.04:0,12,734	0/0:6,0:6:6.02:0,6,91	./.	0/0:38,0:19:0.47:0,0,1	0/0:16,0:11:12.04:0,12,663	1/1:9,7:16:9.03:434,9,0	1/1:24,0:24:2.99:24,3,0	0/0:23,0:22:15.52:0,16,312	0/0:16,0:16:15.05:0,15,713	0/0:8,0:7:12.04:0,12,525	0/0:14,0:12:6.02:0,6,186	1/1:6,6:12:2.04:143,2,0	0/0:14,0:13:16.60:0,17,919	0/1:12,1:13:99:127,0,979	0/0:18,0:18:12.04:0,12,827	1/1:8,0:9:6.02:250,6,0	1/1:26,2:28:4.03:286,4,0	0/1:21,6:26:59.83:294,0,60	0/0:26,0:26:16.86:0,17,578	0/0:10,0:10:11.28:0,11,593	0/0:50,0:46:29.96:0,30,1686	./.	./.	1/1:19,8:27:8.76:301,9,0	0/0:7,0:7:3.01:0,3,175	0/0:7,0:7:3.01:0,3,106	0/0:16,0:19:32.39:0,32,1486	0/0:21,0:19:30.10:0,30,1370
chr10	56112656	.	TA	T	6100.13	PASS	AB=0.990;AC=48;AF=0.857;AN=56;BaseQRankSum=11.665;DP=595;FS=24.244;HRun=3;HaplotypeScore=216.5447;InbreedingCoeff=-0.1837;MQ=72.54;MQ0=0;MQRankSum=-6.875;QD=10.25;ReadPosRankSum=9.549;VQSLOD=0.2999;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:42,0:42:32.63:433,33,0	0/1:8,0:8:31.82:50,0,32	0/1:19,1:20:35.98:36,0,112	0/1:13,0:13:43.50:44,0,92	1/1:23,1:24:41.59:319,42,0	1/1:23,0:23:36.17:263,36,0	1/1:18,1:19:23.43:224,23,0	0/1:31,1:32:58.06:216,0,58	1/1:22,0:22:61.26:318,61,0	1/1:24,0:24:56.86:265,57,0	1/1:14,0:14:32.90:172,33,0	1/1:19,0:19:29.44:273,29,0	1/1:25,1:26:69.16:370,69,0	1/1:18,1:19:28.53:255,29,0	1/1:23,1:24:43.08:314,43,0	1/1:16,2:18:48.50:272,48,0	1/1:32,0:32:11.82:290,12,0	0/1:17,0:17:1.58:113,0,2	1/1:22,0:22:1.08:153,1,0	0/1:17,0:17:27.31:142,0,27	1/1:25,1:26:53.77:268,54,0	1/1:16,0:16:17:188,17,0	0/1:24,0:24:49.65:132,0,50	1/1:22,0:22:41.67:227,42,0	1/1:19,0:19:2.55:185,3,0	0/1:26,0:26:8.94:232,0,9	1/1:17,1:18:3.03:212,3,0	1/1:9,0:9:25.71:134,26,0
chr10	56112686	.	T	TG	16319.35	PASS	AB=0.791;AC=54;AF=0.964;AN=56;BaseQRankSum=-0.529;DP=556;FS=33.584;HRun=4;HaplotypeScore=174.8814;InbreedingCoeff=-0.0388;MQ=72.91;MQ0=1;MQRankSum=-6.881;QD=29.35;ReadPosRankSum=3.867;VQSLOD=1.8082;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,31:40:99:1285,102,0	1/1:1,6:7:15.05:205,15,0	0/1:12,4:15:47.62:48,0,173	0/1:13,5:18:89.28:186,0,89	1/1:5,15:20:48.13:619,48,0	1/1:2,16:18:48.16:645,48,0	1/1:3,15:18:48.13:619,48,0	1/1:10,12:22:42.09:535,42,0	1/1:6,16:22:57.18:755,57,0	1/1:6,17:23:51.17:696,51,0	1/1:1,9:10:21.07:279,21,0	1/1:4,21:25:57.19:766,57,0	1/1:2,24:26:63.21:859,63,0	1/1:4,19:23:45.14:599,45,0	1/1:1,30:31:75.25:1023,75,0	1/1:4,19:22:57.19:778,57,0	1/1:4,24:28:81.18:1064,81,0	1/1:4,16:20:48.16:639,48,0	1/1:5,12:17:45.12:579,45,0	1/1:2,12:14:27.08:353,27,0	1/1:3,19:22:30.06:388,30,0	1/1:1,9:10:15.05:205,15,0	1/1:7,5:12:17.65:244,18,0	1/1:2,21:23:51.17:691,51,0	1/1:5,10:15:33.11:445,33,0	1/1:4,15:19:48.15:635,48,0	1/1:9,17:26:66.19:852,66,0	1/1:0,8:8:24.08:328,24,0
chr10	56117200	.	AGGGCTTGCGACCCAGCT	A	1196.99	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.261;DP=464;FS=2.775;HRun=0;HaplotypeScore=205.6886;InbreedingCoeff=0.8794;MQ=80.97;MQ0=0;MQRankSum=-4.295;QD=79.80;ReadPosRankSum=-1.064;VQSLOD=3.4600;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:81.28:0,81,6517	1/1:2,3:5:9.03:436,9,0	0/0:15,0:15:29.89:0,30,1510	0/0:15,0:15:3.74:0,4,1707	0/0:16,0:16:48.16:0,48,3783	0/0:17,0:17:48.16:0,48,3669	0/0:21,0:21:60.19:0,60,4276	1/1:4,6:10:18.06:872,18,0	0/0:14,0:14:39.13:0,39,2993	0/0:19,0:19:57.20:0,57,4459	0/0:10,0:10:30.09:0,30,2169	0/0:18,0:18:45.15:0,45,3168	0/0:13,0:13:36.12:0,36,2857	0/0:16,0:16:45.15:0,45,3201	0/0:20,0:20:54.18:0,54,4455	0/0:22,0:22:66.23:0,66,5345	0/0:29,0:29:78.27:0,78,6091	0/0:39,0:39:99:0,102,7856	0/0:16,0:16:39.13:0,39,2376	0/0:7,0:7:21.07:0,21,1490	0/0:30,0:30:90.29:0,90,6257	0/0:5,0:5:15.05:0,15,1209	0/0:10,0:10:27.09:0,27,2043	0/0:14,0:14:42.14:0,42,3398	0/0:18,0:18:51.17:0,51,3474	0/0:16,0:16:45.15:0,45,3511	0/0:13,0:13:39.13:0,39,2972	0/0:9,0:9:24.08:0,24,1913
chr10	56121853	.	T	TAA	4284.77	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=3.287;DP=607;FS=15.852;HRun=0;HaplotypeScore=116.4859;InbreedingCoeff=0.9067;MQ=76.71;MQ0=1;MQRankSum=0.313;QD=17.42;ReadPosRankSum=-0.553;VQSLOD=4.0078;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:58.63:0,59,753	0/0:12,0:12:29.56:0,30,291	0/0:46,0:26:46.72:0,47,570	0/0:33,0:22:12.33:0,12,252	0/0:18,0:18:50.87:0,51,610	0/0:22,0:22:56.52:0,57,665	0/0:20,0:20:51.17:0,51,718	0/1:22,0:22:24.68:25,0,419	1/1:2,12:17:29.58:307,30,0	1/1:3,18:26:53.55:577,54,0	1/1:2,9:17:34.53:327,35,0	0/0:24,0:24:66.06:0,66,838	0/0:25,0:25:75.21:0,75,1156	0/0:19,0:19:57.15:0,57,872	1/1:5,19:29:38.83:532,39,0	0/0:17,0:17:45.15:0,45,620	0/0:19,0:19:48.12:0,48,599	0/0:20,0:20:54.17:0,54,700	1/1:5,10:19:34.93:360,35,0	1/1:6,17:28:34.66:590,35,0	1/1:1,6:10:17.26:190,17,0	0/0:29,0:29:83.52:0,84,1018	0/0:18,0:18:44.96:0,45,614	0/0:12,0:12:30.02:0,30,325	1/1:6,12:21:8.34:359,8,0	1/1:1,11:14:34.87:380,35,0	1/1:6,18:29:30.62:447,31,0	1/1:7,6:14:12.05:191,12,0
chr10	56121854	.	T	TA	6323.99	PASS	AB=0.803;AC=48;AF=0.857;AN=56;BaseQRankSum=1.884;DP=624;FS=1.787;HRun=13;HaplotypeScore=108.3711;InbreedingCoeff=0.6343;MQ=75.47;MQ0=2;MQRankSum=0.869;QD=11.60;ReadPosRankSum=-0.671;VQSLOD=4.1753;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,17:26:0.68:269,1,0	1/1:5,1:13:20.16:119,20,0	0/1:49,0:26:1.25:1,0,51	0/0:32,1:22:7.02:0,7,57	1/1:6,11:18:38.51:300,39,0	1/1:4,15:22:44.56:377,45,0	0/1:7,13:20:5.08:243,0,5	1/1:14,0:28:45.92:244,46,0	1/1:18,0:18:37.57:216,38,0	1/1:25,0:25:54.94:324,55,0	1/1:19,0:19:46.56:272,47,0	1/1:5,18:24:13.21:392,13,0	0/0:22,1:25:30.54:0,31,344	0/0:18,0:19:16.66:0,17,225	1/1:27,0:27:48.58:257,49,0	1/1:5,13:18:33.04:307,33,0	1/1:5,15:20:3.81:308,4,0	1/1:3,18:21:42.05:390,42,0	1/1:22,0:22:43.06:227,43,0	1/1:27,0:27:57.57:328,58,0	1/1:10,0:10:22.92:128,23,0	1/1:6,22:29:56.62:475,57,0	1/1:8,9:17:0.44:147,0,0	1/1:3,8:12:24.03:223,24,0	1/1:22,0:22:21.75:169,22,0	1/1:15,0:15:40.46:244,40,0	1/1:28,0:29:48.40:264,48,0	1/1:14,0:14:17.21:99,17,0
chr10	56125946	.	AT	A	7825.92	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-2.058;DP=384;FS=13.361;HRun=3;HaplotypeScore=109.4983;InbreedingCoeff=0.8756;MQ=42.69;MQ0=4;MQRankSum=-2.331;QD=21.04;ReadPosRankSum=0.813;VQSLOD=3.5241;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,14:18:39.02:371,39,0	1/1:3,2:5:15.01:146,15,0	0/0:7,0:6:12.04:0,12,144	0/0:5,0:5:12.01:0,12,122	1/1:4,6:9:18.45:168,18,0	1/1:2,9:10:27.02:253,27,0	1/1:9,17:22:48.03:426,48,0	1/1:4,19:23:63.15:693,63,0	1/1:15,15:28:78.03:707,78,0	1/1:5,6:8:24.07:284,24,0	1/1:2,3:5:11.98:124,12,0	1/1:6,11:14:39.03:359,39,0	1/1:3,15:16:41.90:370,42,0	1/1:7,16:22:59.99:523,60,0	1/1:8,16:20:51.04:475,51,0	1/1:1,9:8:21.02:201,21,0	1/1:4,11:15:30.04:292,30,0	1/1:2,7:9:21.03:213,21,0	1/1:1,5:5:15.04:178,15,0	1/1:5,2:6:18.04:188,18,0	1/1:13,16:27:48.07:512,48,0	1/1:6,7:13:27.04:273,27,0	1/1:4,3:7:9.02:96,9,0	1/1:4,14:14:15.29:126,15,0	1/1:2,7:8:18.02:173,18,0	1/1:2,8:10:27.07:305,27,0	1/1:7,4:11:20.98:191,21,0	1/1:4,1:5:15.04:177,15,0
chr10	56125952	.	C	CA	11902.38	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-2.959;DP=423;FS=12.237;HRun=1;HaplotypeScore=105.1585;InbreedingCoeff=0.9143;MQ=43.61;MQ0=0;MQRankSum=-2.194;QD=28.96;ReadPosRankSum=0.908;VQSLOD=3.3980;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,15:18:54.08:623,54,0	1/1:4,2:6:18.05:228,18,0	0/0:7,0:6:12:0,12,109	0/0:5,0:5:12.02:0,12,113	1/1:5,6:11:26.69:270,27,0	1/1:5,9:13:27.08:325,27,0	1/1:10,21:27:63.19:773,63,0	1/1:0,23:23:69.23:969,69,0	1/1:11,16:27:78.23:938,78,0	1/1:2,10:10:30.08:416,30,0	1/1:2,3:5:14.96:150,15,0	1/1:9,12:19:51.11:617,51,0	1/1:5,13:16:45.12:509,45,0	1/1:6,19:25:69.16:792,69,0	1/1:7,16:20:51.15:604,51,0	1/1:3,7:8:21.06:255,21,0	1/1:6,14:20:45.09:552,45,0	1/1:1,9:10:30.10:415,30,0	1/1:4,6:9:21.07:307,21,0	1/1:7,2:7:18.06:236,18,0	1/1:11,21:30:72.09:892,72,0	1/1:6,8:14:29.97:314,30,0	1/1:4,4:8:12:142,12,0	1/1:5,14:16:15.72:165,16,0	1/1:5,7:11:24.01:261,24,0	1/1:6,10:16:42.14:599,42,0	1/1:7,4:11:27.08:335,27,0	1/1:4,1:5:15.05:216,15,0
chr10	56127986	.	GATT	G	5733.74	PASS	AB=0.515;AC=21;AF=0.375;AN=56;BaseQRankSum=11.559;DP=411;FS=2.581;HRun=0;HaplotypeScore=60.9988;InbreedingCoeff=0.9130;MQ=60.24;MQ0=7;MQRankSum=-0.342;QD=41.85;ReadPosRankSum=0.846;VQSLOD=5.6486;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:71.92:0,72,1707	0/0:4,0:4:12.04:0,12,279	0/0:18,0:10:30.10:0,30,657	0/0:18,0:13:35.61:0,36,808	0/0:14,0:13:39.13:0,39,927	0/0:14,0:13:39.13:0,39,962	0/0:27,0:25:69.24:0,69,1683	0/0:11,0:11:33.08:0,33,714	1/1:0,21:21:54.19:1006,54,0	1/1:0,11:10:27.08:471,27,0	1/1:0,11:11:27.09:502,27,0	0/0:17,0:17:48.16:0,48,1114	0/0:12,0:12:36.12:0,36,884	0/0:19,0:19:54.19:0,54,1313	0/1:1,16:15:40.87:526,0,41	0/0:12,0:12:36.11:0,36,809	0/0:19,0:19:51.18:0,51,1255	0/0:20,0:20:54.18:0,54,1296	1/1:1,9:9:24.08:447,24,0	1/1:0,12:10:24.08:447,24,0	1/1:0,10:10:15.05:279,15,0	0/0:10,0:10:27.09:0,27,666	0/0:12,0:12:26.83:0,27,665	0/0:18,0:18:54.19:0,54,1329	1/1:0,10:10:24.08:447,24,0	1/1:1,14:13:33.11:603,33,0	1/1:0,15:15:39.13:726,39,0	1/1:0,5:5:15.05:280,15,0
chr10	56128491	.	AG	A	10089.83	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=14.902;DP=733;FS=3.199;HRun=2;HaplotypeScore=71.2306;InbreedingCoeff=1.0000;MQ=85.90;MQ0=0;MQRankSum=-3.068;QD=36.82;ReadPosRankSum=1.622;VQSLOD=5.6265;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,123,1835	0/0:19,0:19:54.17:0,54,786	0/0:26,0:26:72.24:0,72,1062	0/0:24,0:23:63.21:0,63,910	0/0:17,0:17:42.14:0,42,626	0/0:27,0:27:81.27:0,81,1210	0/0:31,0:31:93.31:0,93,1385	0/0:32,0:32:87.29:0,87,1279	1/1:0,20:20:57.19:740,57,0	1/1:0,28:28:84.26:1074,84,0	1/1:0,19:19:45.15:584,45,0	0/0:34,0:34:99:0,99,1461	0/0:25,0:25:75.25:0,75,1124	0/0:21,0:21:63.21:0,63,944	1/1:1,30:31:90.29:1169,90,0	0/0:33,0:33:96.29:0,96,1414	0/0:24,0:24:72.23:0,72,1059	0/0:27,0:27:72.24:0,72,1075	1/1:1,17:18:51.14:645,51,0	1/1:0,27:27:81.26:1048,81,0	1/1:0,32:32:93.30:1207,93,0	0/0:29,0:29:87.26:0,87,1247	0/0:17,0:17:51.17:0,51,764	0/0:29,0:29:87.28:0,87,1279	1/1:1,27:28:75.24:974,75,0	1/1:0,18:18:54.18:701,54,0	1/1:0,27:27:81.26:1052,81,0	1/1:0,26:26:69.22:896,69,0
chr10	56129468	.	GC	G	8278	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=9.684;DP=744;FS=1.294;HRun=3;HaplotypeScore=87.6096;InbreedingCoeff=1.0000;MQ=80.91;MQ0=0;MQRankSum=-2.338;QD=33.24;ReadPosRankSum=3.106;VQSLOD=5.2527;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,99,1407	0/0:17,0:17:51.17:0,51,733	0/0:21,0:21:51.02:0,51,647	0/0:29,0:28:70.76:0,71,923	0/0:34,0:34:99:0,99,1383	1/1:0,27:27:72.23:891,72,0	1/1:2,26:28:63.20:781,63,0	0/0:38,0:38:99:0,105,1443	0/0:21,0:21:60.20:0,60,863	0/0:34,0:34:96.77:0,97,1328	0/0:21,0:21:63.19:0,63,867	1/1:0,39:39:99:1262,101,0	0/0:27,0:27:75.24:0,75,1059	0/0:25,0:25:69.22:0,69,973	0/0:31,0:31:90.28:0,90,1275	1/1:0,26:26:78.25:966,78,0	1/1:1,31:32:93.29:1152,93,0	1/1:0,19:19:54.17:668,54,0	0/0:13,0:13:36.12:0,36,518	0/0:22,0:22:65.80:0,66,880	0/0:34,0:34:99:0,102,1447	1/1:0,26:26:69.22:854,69,0	1/1:2,21:23:57.18:701,57,0	1/1:0,29:29:81.25:1004,81,0	0/0:25,0:25:75.25:0,75,1077	0/0:25,0:25:72.24:0,72,1034	0/0:27,0:27:81.27:0,81,1163	0/0:17,0:17:51.17:0,51,733
chr10	56130402	.	T	TG	3603.18	PASS	AB=0.969;AC=13;AF=0.232;AN=56;BaseQRankSum=-5.631;DP=783;FS=0.784;HRun=8;HaplotypeScore=98.0460;InbreedingCoeff=0.8888;MQ=85.52;MQ0=0;MQRankSum=-2.183;QD=21.20;ReadPosRankSum=-1.867;VQSLOD=2.6006;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:46:99:0,110,989	0/0:1,0:7:6.11:0,6,18	0/1:30,1:31:3.83:4,0,323	0/0:24,0:23:34.29:0,34,291	0/0:26,0:26:66.02:0,66,603	0/0:18,0:18:36.01:0,36,329	0/0:29,2:31:43.38:0,43,640	0/0:11,0:34:29.66:0,30,103	0/0:36,0:36:81.03:0,81,741	0/0:37,0:37:81.02:0,81,737	0/0:18,0:18:51.02:0,51,466	0/0:43,0:43:99:0,108,982	0/0:22,1:23:22.40:0,22,459	0/0:29,0:29:81.03:0,81,737	0/0:37,0:37:93.01:0,93,846	0/0:35,0:35:90.01:0,90,814	0/0:32,0:32:81.03:0,81,741	0/0:30,0:31:70.99:0,71,624	1/1:6,17:23:51.09:560,51,0	1/1:3,15:18:8.77:353,9,0	1/1:16,29:45:99:1148,102,0	0/0:29,0:29:84.04:0,84,768	0/0:14,0:14:33.02:0,33,302	0/0:48,0:48:99:0,132,1197	0/0:15,0:15:29.99:0,30,274	1/1:4,16:20:20.69:480,21,0	1/1:2,26:28:81.18:920,81,0	1/1:0,5:5:12.04:138,12,0
chr10	56132123	.	AAAAC	A	1972.74	PASS	AB=0.854;AC=5;AF=0.089;AN=56;BaseQRankSum=7.078;DP=751;FS=8.864;HRun=0;HaplotypeScore=123.7251;InbreedingCoeff=0.2980;MQ=56.88;MQ0=22;MQRankSum=-1.369;QD=14.83;ReadPosRankSum=1.279;VQSLOD=2.9246;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:17,39:56:96.22:1533,96,0	0/0:17,0:16:27.06:0,27,594	0/0:19,0:5:6.02:0,6,139	0/0:18,0:2:6.02:0,6,139	0/0:40,0:39:75.23:0,75,1670	0/0:20,0:20:45.15:0,45,1069	0/0:30,1:30:3.28:0,3,1066	0/0:27,0:25:36.97:0,37,698	0/0:17,0:17:30.09:0,30,670	0/0:26,0:26:39.12:0,39,865	0/0:27,0:26:45.09:0,45,941	0/0:34,0:34:54.17:0,54,1214	0/0:19,0:19:48.16:0,48,1086	0/0:25,0:25:48.13:0,48,1042	0/0:31,0:31:42.13:0,42,895	0/0:26,0:26:51.17:0,51,1191	0/0:33,0:33:57.13:0,57,1199	0/1:15,16:31:32.48:536,0,32	0/0:16,0:15:12.04:0,12,287	0/0:34,1:32:24.33:0,24,1523	0/0:19,0:18:36.12:0,36,828	0/0:25,0:25:36.12:0,36,854	0/0:24,0:25:14.11:0,14,770	0/0:41,0:41:93.28:0,93,2125	0/1:31,1:31:2.75:3,0,959	0/0:25,0:25:48.15:0,48,1080	0/0:22,0:22:45.09:0,45,960	0/1:13,1:14:17.79:18,0,614
chr10	56134445	.	AG	A	4729.48	PASS	AB=0.957;AC=27;AF=0.482;AN=56;BaseQRankSum=-6.137;DP=644;FS=9.163;HRun=10;HaplotypeScore=89.9245;InbreedingCoeff=0.9366;MQ=87.49;MQ0=1;MQRankSum=-1.124;QD=14.92;ReadPosRankSum=2.901;VQSLOD=4.6269;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:23:47.94:0,48,498	1/1:5,5:10:17.48:139,17,0	0/1:41,2:38:0.19:0,0,284	0/0:37,0:35:10.97:0,11,300	0/0:17,0:17:30.08:0,30,332	0/0:7,0:19:31.74:0,32,205	0/0:10,0:25:37.44:0,37,247	1/1:8,12:22:15.20:247,15,0	1/1:4,28:32:77.97:677,78,0	1/1:6,19:25:53.98:468,54,0	1/1:3,14:17:35.43:288,35,0	0/0:28,1:30:48.64:0,49,719	0/0:19,0:19:54.11:0,54,584	0/0:26,0:26:63.17:0,63,693	1/1:7,30:37:43.87:616,44,0	0/0:7,0:29:62.12:0,62,342	0/0:7,0:21:37.39:0,37,221	0/0:3,0:15:31.28:0,31,156	1/1:1,14:15:41.94:355,42,0	1/1:4,10:14:4.99:170,5,0	1/1:4,12:16:23.99:208,24,0	0/0:8,0:22:31.25:0,31,157	0/0:4,0:15:25.82:0,26,140	0/0:7,0:29:57.11:0,57,309	1/1:4,16:20:38.99:339,39,0	1/1:7,17:24:29.59:415,30,0	1/1:2,22:24:62.99:547,63,0	1/1:3,14:17:29.99:260,30,0
chr10	56134767	.	G	GGGA	5550.21	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-4.639;DP=481;FS=0.000;HRun=0;HaplotypeScore=87.3728;InbreedingCoeff=0.8567;MQ=77.37;MQ0=1;MQRankSum=-4.170;QD=15.29;ReadPosRankSum=-3.444;VQSLOD=3.3283;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:57.15:0,57,782	1/1:2,2:9:12.02:176,12,0	0/0:22,0:21:40.91:0,41,477	0/0:10,0:10:23.74:0,24,300	0/0:29,0:29:75.11:0,75,1022	1/1:3,1:15:12.91:193,13,0	1/1:6,0:21:16.28:278,16,0	1/1:3,11:16:38.86:334,39,0	1/1:1,13:19:12.50:184,13,0	1/1:6,8:16:23.99:253,24,0	1/1:2,10:14:14.13:164,14,0	1/1:4,11:18:6.02:129,6,0	0/0:20,0:20:57.09:0,57,759	0/0:16,0:16:45.06:0,45,578	1/1:1,15:16:16.52:564,17,0	1/1:2,0:25:11.81:198,12,0	1/1:3,9:14:12.04:218,12,0	1/1:6,1:8:21.33:274,21,0	1/1:2,0:9:21.01:278,21,0	1/1:3,11:16:17.79:144,18,0	1/1:4,5:13:11.38:184,11,0	1/1:3,2:20:11.54:172,12,0	1/1:4,2:16:2.55:55,3,0	1/1:0,0:16:6.02:102,6,0	1/1:4,2:22:12:138,12,0	1/1:6,10:23:39.02:454,39,0	1/1:3,21:26:41.99:870,42,0	1/1:1,9:10:9.03:188,9,0
chr10	56144475	.	TTC	T	328.21	PASS	AB=1.000;AC=16;AF=0.308;AN=52;BaseQRankSum=0.622;DP=679;FS=50.403;HRun=0;HaplotypeScore=90.0606;InbreedingCoeff=0.4757;MQ=55.54;MQ0=14;MQRankSum=0.507;QD=1.53;ReadPosRankSum=2.513;VQSLOD=-0.5746;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:2.81:0,3,239	0/0:14,0:14:5.99:0,6,49	./.	./.	0/0:18,0:16:2.99:0,3,24	1/1:19,0:19:8.63:74,9,0	1/1:23,7:31:11.94:114,12,0	0/0:29,0:27:5.99:0,6,59	0/0:22,0:22:5.99:0,6,64	0/0:29,0:29:26.24:0,26,199	0/0:16,0:16:3.01:0,3,40	1/1:21,15:36:5.53:64,6,0	0/1:21,0:21:6.16:6,0,135	0/0:18,0:18:2.99:0,3,23	0/0:21,0:29:3:0,3,26	1/1:21,9:30:3.01:32,3,0	1/1:24,0:26:8.80:57,9,0	1/1:11,11:22:8.16:95,8,0	0/0:26,0:26:6.02:0,6,71	0/0:20,0:20:5.88:0,6,52	0/0:38,0:38:11.40:0,11,91	1/1:10,2:12:3.01:32,3,0	0/1:17,0:17:11.65:12,0,96	0/0:42,0:41:41.32:0,41,393	0/0:15,0:15:11.67:0,12,114	0/0:28,0:28:28.24:0,28,285	0/0:26,0:25:23.97:0,24,201	0/0:8,0:8:6:0,6,57
chr10	56148626	.	T	TC	1732.51	PASS	AB=0.705;AC=20;AF=0.357;AN=56;BaseQRankSum=-5.908;DP=532;FS=7.654;HRun=10;HaplotypeScore=67.4330;InbreedingCoeff=0.3944;MQ=73.34;MQ0=4;MQRankSum=-1.518;QD=7.19;ReadPosRankSum=-2.744;VQSLOD=1.0596;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:31:65.87:0,66,491	1/1:9,0:9:3:26,3,0	0/1:21,0:17:4.40:4,0,155	0/0:24,0:14:13.90:0,14,91	0/0:23,0:23:50.89:0,51,411	0/0:18,0:20:37.97:0,38,299	0/0:16,0:17:49.75:0,50,381	1/1:24,0:24:12.88:104,13,0	1/1:7,12:19:11.44:313,11,0	1/1:6,10:16:24.02:238,24,0	0/1:5,9:14:31.38:35,0,31	0/0:24,0:24:53.81:0,54,435	0/0:17,0:17:29.63:0,30,246	0/0:13,0:13:32.93:0,33,268	0/1:6,11:17:25.83:95,0,26	0/0:17,0:17:44.90:0,45,362	0/0:23,0:23:59.89:0,60,488	0/0:19,0:19:27.09:0,27,321	0/1:8,10:18:15.84:198,0,16	0/1:8,7:15:6.72:115,0,7	1/1:4,8:12:18.05:192,18,0	0/0:13,1:14:23.86:0,24,188	0/0:24,0:24:51.74:0,52,412	0/0:24,0:25:64.92:0,65,517	1/1:6,8:14:6.02:64,6,0	0/1:11,11:22:3.37:184,0,3	0/1:9,18:27:59.34:241,0,59	0/1:9,1:10:6.65:110,0,7
chr10	56150659	.	TCC	T	4604.85	PASS	AB=0.638;AC=26;AF=0.464;AN=56;BaseQRankSum=-9.572;DP=510;FS=12.326;HRun=12;HaplotypeScore=81.6128;InbreedingCoeff=0.6039;MQ=80.38;MQ0=1;MQRankSum=-3.310;QD=16.74;ReadPosRankSum=4.387;VQSLOD=2.4898;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:22:15.22:0,15,117	0/0:3,0:4:0:0,0,0	0/0:24,0:22:30.02:0,30,352	0/0:14,0:13:20.09:0,20,200	0/0:5,0:6:8.52:0,9,97	0/1:7,1:15:37.45:37,0,38	0/0:11,0:27:35.95:0,36,173	0/0:9,0:12:6:0,6,36	1/1:1,17:19:44.84:439,45,0	1/1:5,11:16:33.04:333,33,0	1/1:6,8:14:24.03:244,24,0	0/1:11,2:26:21.26:21,0,108	0/0:17,0:19:20.99:0,21,195	0/0:9,1:24:34.45:0,34,175	1/1:2,29:32:86.90:866,87,0	0/0:5,2:29:5.22:0,5,99	0/0:7,1:21:11.04:0,11,154	0/1:3,3:16:26.56:27,0,113	1/1:6,13:19:39.04:397,39,0	1/1:3,9:12:27.04:274,27,0	1/1:8,28:37:74.87:814,75,0	0/1:6,1:10:15.89:20,0,16	0/0:4,0:9:9.86:0,10,35	0/0:5,1:22:2.44:0,2,75	1/1:4,8:12:23.74:225,24,0	1/1:5,13:20:38.52:358,39,0	1/1:2,16:18:45.09:458,45,0	1/1:0,8:8:9.02:92,9,0
chr10	56155491	.	G	GA	1209.67	PASS	AB=0.816;AC=20;AF=0.385;AN=52;BaseQRankSum=2.333;DP=439;FS=21.393;HRun=11;HaplotypeScore=98.0668;InbreedingCoeff=0.5071;MQ=41.86;MQ0=30;MQRankSum=-1.740;QD=6.40;ReadPosRankSum=-3.768;VQSLOD=-0.3367;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:35:18.08:0,18,213	0/1:7,1:8:3.57:4,0,58	./.	./.	0/0:23,1:23:14.57:0,15,112	0/1:16,2:18:7.65:8,0,122	0/0:16,0:14:14.84:0,15,116	0/0:11,0:9:17.91:0,18,139	1/1:4,4:8:11:87,11,0	1/1:11,4:14:20.84:183,21,0	0/1:11,6:17:8.41:78,0,8	0/0:10,0:10:7.50:0,7,51	0/0:9,0:11:13.92:0,14,96	0/0:16,0:17:17.53:0,18,139	1/1:15,6:17:15.09:108,15,0	0/0:15,0:16:6.20:0,6,124	0/0:24,0:20:21.97:0,22,161	0/0:23,0:23:10.63:0,11,174	1/1:14,3:15:29.64:240,30,0	1/1:13,5:17:15.02:147,15,0	1/1:8,0:7:2.96:19,3,0	0/0:14,1:14:8.87:0,9,68	0/0:12,0:12:14.86:0,15,116	0/0:16,0:14:10.52:0,11,75	0/1:11,4:13:10.80:67,0,11	1/1:8,5:13:23.84:213,24,0	0/1:12,3:15:0.42:160,0,0	0/1:6,4:10:14.67:77,0,15
chr10	56155926	.	T	TTAAA	1130.60	PASS	AB=0.955;AC=22;AF=0.458;AN=48;BaseQRankSum=2.630;DP=271;FS=2.033;HRun=0;HaplotypeScore=51.7220;InbreedingCoeff=0.5532;MQ=57.64;MQ0=2;MQRankSum=-2.935;QD=9.66;ReadPosRankSum=-3.359;VQSLOD=1.5888;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:9,8:18:15.05:352,15,0	0/0:4,0:4:3.01:0,3,46	./.	./.	1/1:10,2:12:6.02:110,6,0	0/0:10,0:10:15.05:0,15,231	0/0:5,0:5:6.02:0,6,93	0/0:26,0:21:5.96:0,6,43	1/1:4,0:7:6.02:94,6,0	./.	1/1:3,0:3:2.98:21,3,0	0/1:9,1:10:55.06:55,0,170	0/0:12,0:12:9.03:0,9,139	0/0:5,0:5:3.01:0,3,46	1/1:12,0:12:12.03:179,12,0	0/0:7,0:7:15.05:0,15,230	0/0:18,0:18:10.14:0,10,372	0/0:19,0:19:21.04:0,21,300	./.	0/1:8,0:8:0:0,0,0	1/1:4,0:4:2.99:24,3,0	0/0:7,0:7:3.01:0,3,46	0/0:8,0:8:6.02:0,6,93	0/0:4,0:4:3.01:0,3,41	1/1:9,0:8:4.26:56,4,0	1/1:12,0:12:12.03:183,12,0	1/1:11,0:12:6:63,6,0	1/1:7,0:10:9.03:157,9,0
chr10	56156719	.	GTCCCTCCA	G	4838.44	PASS	AB=0.731;AC=19;AF=0.339;AN=56;BaseQRankSum=11.525;DP=857;FS=25.164;HRun=0;HaplotypeScore=120.2550;InbreedingCoeff=-0.5588;MQ=42.13;MQ0=131;MQRankSum=-9.934;QD=7.72;ReadPosRankSum=-3.137;VQSLOD=1.2053;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:30:54.19:0,54,1862	0/0:8,0:3:6.02:0,6,182	0/0:34,0:1:3.01:0,3,74	0/0:32,0:1:3.01:0,3,58	0/0:20,0:17:45.14:0,45,1330	0/1:15,6:18:99:300,0,601	0/1:30,11:27:51.06:51,0,892	0/1:19,1:7:37.89:38,0,147	0/1:30,20:31:99:529,0,854	0/1:20,10:22:99:393,0,765	0/0:6,2:5:6.02:0,6,190	0/1:40,17:46:99:638,0,2323	0/0:30,0:22:51.16:0,51,1606	0/0:46,0:38:99:0,99,3212	0/1:27,12:29:99:263,0,1645	0/1:15,21:30:99:538,0,490	0/1:21,12:27:99:124,0,1104	0/1:15,21:32:99:220,0,523	0/1:18,3:10:99:144,0,505	0/0:13,3:14:21.07:0,21,706	0/1:62,30:61:99:127,0,1093	0/1:7,8:13:99:224,0,297	0/1:8,7:13:69.14:69,0,305	0/1:23,17:30:59.16:59,0,712	0/1:9,9:16:99:144,0,403	0/1:22,9:26:99:518,0,1145	0/1:3,12:13:91.88:313,0,92	0/1:10,7:14:99:147,0,403
chr10	56157431	.	T	TGGTAGG	18185.21	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-11.736;DP=735;FS=3.192;HRun=0;HaplotypeScore=146.7665;InbreedingCoeff=0.9836;MQ=80.70;MQ0=0;MQRankSum=-16.972;QD=65.41;ReadPosRankSum=-0.426;VQSLOD=5.1274;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,135,2914	0/0:12,0:12:33.11:0,33,747	0/0:22,0:23:55.99:0,56,1140	0/0:28,0:28:26.25:0,26,956	0/0:27,0:27:75.26:0,75,1696	0/0:26,0:26:72.25:0,72,1611	0/0:28,0:28:84.29:0,84,1812	0/0:22,0:22:54.18:0,54,1179	1/1:5,23:31:69.19:2300,69,0	1/1:9,13:22:54.17:1691,54,0	1/1:9,17:26:48.16:1653,48,0	0/0:28,0:28:81.28:0,81,1813	0/0:21,0:21:51.17:0,51,1115	0/0:28,0:28:69.24:0,69,1551	1/1:8,33:44:84.29:2871,84,0	0/0:37,0:37:99:0,108,2361	0/0:29,0:29:72.25:0,72,1609	0/0:24,0:24:63.19:0,63,1341	1/1:7,16:25:63.18:1820,63,0	1/1:11,19:31:63.22:2167,63,0	1/1:10,10:23:18.06:604,18,0	0/0:27,0:27:78.25:0,78,1677	0/0:22,0:22:60.21:0,60,1349	0/0:26,0:26:75.26:0,75,1665	1/1:7,12:19:36.08:1147,36,0	1/1:5,24:30:75.21:2379,75,0	1/1:10,11:23:38.92:1347,39,0	1/1:1,3:4:6.02:207,6,0
chr10	56157435	.	A	AG	1174.56	PASS	AB=0.993;AC=12;AF=0.214;AN=56;BaseQRankSum=18.211;DP=722;FS=6.292;HRun=3;HaplotypeScore=133.2389;InbreedingCoeff=-0.0276;MQ=79.36;MQ0=0;MQRankSum=-17.868;QD=4.38;ReadPosRankSum=3.996;VQSLOD=0.4541;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,138,1656	0/0:11,0:11:33.10:0,33,396	0/0:21,0:21:56.96:0,57,653	0/0:27,0:27:59.01:0,59,658	0/0:27,0:27:75.23:0,75,900	0/0:25,0:25:75.23:0,75,900	0/0:31,0:31:93.19:0,93,1084	0/0:24,0:24:63.18:0,63,739	0/1:31,0:31:6.67:176,0,7	0/1:21,0:21:98.40:98,0,116	0/1:24,2:26:21.97:140,0,22	0/0:28,0:28:81.25:0,81,972	0/0:20,0:20:54.16:0,54,648	0/0:28,0:28:72.22:0,72,863	0/1:42,0:42:62.52:199,0,63	0/0:38,0:38:99:0,111,1320	0/0:27,0:27:78.24:0,78,935	0/0:22,0:22:63.19:0,63,756	0/1:21,0:21:80.68:81,0,151	1/1:29,2:31:35.03:216,35,0	0/1:20,0:20:48.09:48,0,78	0/0:26,0:26:78.23:0,78,925	0/0:23,0:23:66.20:0,66,792	0/0:27,0:27:78.24:0,78,936	0/1:17,0:17:38.21:76,0,38	0/1:29,0:29:39.47:205,0,39	0/1:24,0:24:68.82:81,0,69	0/1:6,0:6:13.44:13,0,28
chr10	56157439	.	T	TAGGGG	6354.69	PASS	AB=0.986;AC=12;AF=0.214;AN=56;BaseQRankSum=17.827;DP=706;FS=9.895;HRun=0;HaplotypeScore=162.2951;InbreedingCoeff=-0.0737;MQ=80.77;MQ0=0;MQRankSum=-18.379;QD=26.04;ReadPosRankSum=4.974;VQSLOD=3.7807;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,141,3103	0/0:11,0:11:33.11:0,33,768	0/0:24,0:24:69.09:0,69,1287	0/0:25,0:25:53.58:0,54,1119	0/0:27,0:27:81.24:0,81,1786	0/0:26,0:26:78.22:0,78,1700	0/0:34,0:34:99:0,99,1958	0/0:28,0:28:75.10:0,75,1398	1/1:29,0:29:7.28:901,7,0	0/1:19,0:19:85.81:426,0,86	0/1:20,2:22:23.77:712,0,24	0/0:29,0:29:84.27:0,84,1884	0/0:21,0:21:60.16:0,60,1212	0/0:26,0:26:78.23:0,78,1669	0/1:38,0:38:55.57:1055,0,56	0/0:39,0:39:99:0,114,2464	0/0:26,0:26:78.24:0,78,1697	0/0:21,0:21:63.22:0,63,1413	0/1:22,0:22:99:434,0,110	0/1:29,2:31:41.65:883,0,42	0/1:17,0:17:52.39:236,0,52	0/0:25,0:25:75.26:0,75,1694	0/0:24,0:24:69.20:0,69,1466	0/0:27,0:27:81.24:0,81,1759	0/1:15,0:15:10.85:396,0,11	0/1:27,0:27:33.23:819,0,33	0/1:20,0:20:55.03:420,0,55	0/1:4,0:4:35.94:73,0,36
chr10	56158655	.	T	TCACACA	1924.18	PASS	AB=0.914;AC=22;AF=0.423;AN=52;BaseQRankSum=-0.388;DP=595;FS=2.580;HRun=0;HaplotypeScore=147.0683;InbreedingCoeff=0.6094;MQ=57.92;MQ0=16;MQRankSum=-1.992;QD=7.10;ReadPosRankSum=-1.463;VQSLOD=2.3718;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:33:6.72:0,7,104	0/0:9,0:11:5.97:0,6,62	./.	./.	1/1:19,0:18:8.78:58,9,0	1/1:16,0:16:9.03:141,9,0	1/1:33,3:40:12.98:254,13,0	0/0:20,0:20:2.84:0,3,30	0/0:20,0:21:30.04:0,30,443	0/0:14,0:14:23.99:0,24,427	0/0:11,0:11:9.03:0,9,181	1/1:24,8:38:20.87:512,21,0	0/1:19,0:19:13.20:13,0,309	0/0:14,0:13:9:0,9,143	0/0:15,0:16:26.04:0,26,296	0/1:23,6:28:14.08:271,0,14	1/1:14,0:14:3.01:37,3,0	1/1:19,0:19:11.95:110,12,0	0/0:15,0:14:0.47:0,0,1	1/1:7,0:7:2.99:24,3,0	0/0:28,0:37:15.05:0,15,232	1/1:20,0:19:5.83:93,6,0	1/1:14,0:14:9:161,9,0	1/1:32,1:30:20.02:432,20,0	0/0:17,0:17:15.52:0,16,273	0/0:21,0:20:15.01:0,15,202	0/0:11,0:10:3.01:0,3,42	0/0:14,0:14:12:0,12,149
chr10	56162980	.	T	TGAGAGA	14583.58	PASS	AB=0.609;AC=42;AF=0.750;AN=56;BaseQRankSum=-5.720;DP=570;FS=1.037;HRun=0;HaplotypeScore=123.8484;InbreedingCoeff=0.7771;MQ=63.97;MQ0=3;MQRankSum=-9.108;QD=33.99;ReadPosRankSum=-2.135;VQSLOD=3.9130;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:18:36.11:0,36,691	1/1:1,4:5:9.03:247,9,0	0/0:32,0:20:18.87:0,19,225	0/0:25,0:16:23.28:0,23,279	0/0:21,0:21:42.13:0,42,829	1/1:12,20:36:53.83:1554,54,0	0/1:6,11:22:55.27:524,0,55	1/1:23,9:41:61.29:1231,61,0	1/1:11,14:27:42.14:1325,42,0	1/1:10,8:19:29.53:693,30,0	1/1:7,8:19:14.66:477,15,0	1/1:9,9:19:27.09:867,27,0	0/0:27,0:29:72.24:0,72,1446	0/0:13,0:14:33.11:0,33,671	1/1:8,11:20:24.08:726,24,0	1/1:6,13:23:23.82:726,24,0	1/1:6,10:19:18.06:491,18,0	1/1:6,9:19:27.09:660,27,0	1/1:11,2:14:14.07:282,14,0	1/1:13,8:23:27.05:738,27,0	1/1:7,0:8:9.02:139,9,0	0/1:7,7:16:6.94:217,0,7	1/1:3,9:13:21.07:642,21,0	1/1:4,7:13:8.17:291,8,0	1/1:2,10:13:24.08:725,24,0	1/1:7,9:19:36.18:980,36,0	1/1:15,11:32:28.94:820,29,0	1/1:7,0:7:12.02:229,12,0
chr10	56163237	.	CT	C	2960.92	PASS	AB=0.654;AC=36;AF=0.643;AN=56;BaseQRankSum=3.261;DP=520;FS=0.496;HRun=15;HaplotypeScore=68.2265;InbreedingCoeff=0.4080;MQ=77.92;MQ0=6;MQRankSum=-0.947;QD=7.65;ReadPosRankSum=5.148;VQSLOD=2.8066;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:11:26.66:0,27,208	1/1:1,3:4:2.93:19,3,0	0/0:37,0:23:14.51:0,15,108	0/0:36,0:22:16.92:0,17,113	0/0:23,1:24:51.28:0,51,415	0/1:6,11:18:12.98:144,0,13	0/1:2,6:9:3.14:101,0,3	0/1:15,17:35:5.22:231,0,5	1/1:7,6:13:8.70:57,9,0	1/1:11,10:23:28.46:179,28,0	0/1:7,17:25:32.75:190,0,33	1/1:4,7:11:14.71:96,15,0	0/0:11,1:12:13.61:0,14,214	0/0:11,1:12:7.66:0,8,174	1/1:6,14:21:34.41:213,34,0	0/1:9,5:16:4.73:86,0,5	1/1:7,8:15:20.57:134,21,0	0/1:9,9:19:3.66:98,0,4	1/1:10,11:22:11.12:191,11,0	0/1:13,14:28:0.86:227,0,1	1/1:3,4:8:10.87:64,11,0	1/1:3,11:15:22.67:140,23,0	1/1:2,10:13:22.46:140,22,0	1/1:4,13:18:34.54:218,35,0	1/1:2,13:15:8.64:168,9,0	1/1:9,9:18:23.40:152,23,0	1/1:11,16:30:21.93:254,22,0	0/1:9,2:11:41.78:42,0,56
chr10	56166341	.	T	TCCTCTCTCCCAGGTT	33790.29	PASS	AB=0.928;AC=47;AF=0.839;AN=56;BaseQRankSum=-9.709;DP=398;FS=2.666;HRun=0;HaplotypeScore=502.4758;InbreedingCoeff=-0.1970;MQ=63.59;MQ0=0;MQRankSum=-1.013;QD=84.90;ReadPosRankSum=-0.570;VQSLOD=3.7770;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:19:21.89:1776,22,0	1/1:11,0:11:18.33:1123,18,0	0/1:3,1:9:4.54:957,0,5	0/1:8,1:12:26.38:1314,0,26	0/1:16,0:16:4.55:1033,0,5	1/1:15,0:15:21.87:989,22,0	1/1:16,0:16:34.59:1625,35,0	1/1:9,0:9:27.09:1283,27,0	0/1:15,0:15:11.94:806,0,12	1/1:14,0:14:14.04:1334,14,0	0/1:13,0:13:26.53:589,0,27	1/1:16,0:16:6.25:1325,6,0	1/1:14,0:14:12.64:1522,13,0	0/1:20,0:20:10.69:1235,0,11	0/1:22,0:22:48.76:1142,0,49	1/1:23,0:23:26.30:2883,26,0	1/1:12,0:12:20.97:913,21,0	1/1:2,0:2:6.02:330,6,0	0/1:6,0:6:0.46:596,0,0	0/1:19,0:19:32.40:1318,0,32	1/1:4,0:4:9.03:526,9,0	1/1:20,0:20:7.83:1474,8,0	1/1:16,0:16:7.06:626,7,0	1/1:8,0:8:6.45:649,6,0	1/1:22,0:21:12.10:2427,12,0	1/1:24,0:24:12.94:1937,13,0	1/1:16,0:16:38.32:1634,38,0	1/1:5,0:5:8.49:427,8,0
chr10	56171006	.	CTGTG	C	1132	PASS	AB=0.857;AC=19;AF=0.339;AN=56;BaseQRankSum=2.575;DP=546;FS=1.648;HRun=0;HaplotypeScore=110.8175;InbreedingCoeff=0.6811;MQ=53.64;MQ0=11;MQRankSum=0.728;QD=6.36;ReadPosRankSum=1.487;VQSLOD=1.8692;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:42:49.45:0,49,807	1/1:7,0:7:8.73:91,9,0	0/0:7,0:3:2.99:0,3,24	0/0:10,0:3:3:0,3,29	0/0:16,0:16:24.08:0,24,456	1/1:18,1:19:15.02:193,15,0	1/1:8,0:14:3.01:36,3,0	0/0:25,0:23:3.71:0,4,46	0/0:17,0:17:27.01:0,27,487	0/0:23,0:22:45.13:0,45,787	0/0:12,1:13:13.25:0,13,150	1/1:16,5:21:21.06:310,21,0	0/0:22,0:22:9.24:0,9,421	0/0:16,0:16:15.05:0,15,317	0/0:26,0:25:23.71:0,24,404	0/1:20,2:22:17.32:307,0,17	1/1:26,1:28:6.02:77,6,0	1/1:6,8:14:6.01:71,6,0	0/0:29,0:28:29.94:0,30,423	0/0:22,0:22:17.71:0,18,281	0/0:7,0:7:5.23:0,5,49	1/1:21,0:21:3.01:34,3,0	1/1:9,2:12:8.26:115,8,0	1/1:14,1:14:5.75:81,6,0	0/0:24,0:24:23.92:0,24,482	0/0:32,0:31:15.67:0,16,283	0/0:21,0:20:37.91:0,38,585	0/0:13,0:13:18.97:0,19,237
chr10	56171035	.	TGTGTGTGAGA	T	665	PASS	AB=0.924;AC=15;AF=0.268;AN=56;BaseQRankSum=4.281;DP=535;FS=3.523;HRun=0;HaplotypeScore=149.2437;InbreedingCoeff=0.3695;MQ=43.88;MQ0=28;MQRankSum=2.298;QD=3.28;ReadPosRankSum=1.701;VQSLOD=2.6262;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:35:69.15:0,69,1735	0/1:10,0:10:21.80:22,0,57	0/0:1,0:1:3.01:0,3,43	0/0:4,0:2:3.01:0,3,45	0/0:24,0:23:27.09:0,27,897	0/1:17,0:17:64.46:88,0,64	1/1:14,0:13:3.01:62,3,0	0/0:23,0:19:44.14:0,44,375	0/0:13,0:13:30.99:0,31,853	0/0:29,0:27:69.41:0,69,1669	0/0:15,0:14:15.04:0,15,318	1/1:22,0:20:20.60:236,21,0	0/0:20,0:20:48.76:0,49,1013	0/0:14,0:14:30.54:0,31,894	0/0:19,0:19:34.01:0,34,774	0/1:32,0:28:99:144,0,136	0/1:12,12:21:34.37:74,0,34	0/1:19,0:19:54.82:55,0,112	0/0:21,0:19:43.32:0,43,849	0/0:25,0:24:17.28:0,17,539	0/0:10,0:9:6.90:0,7,117	1/1:23,0:23:3.39:30,3,0	1/1:25,0:25:8.05:69,8,0	1/1:16,0:13:5.85:50,6,0	0/0:18,0:18:23.78:0,24,817	0/0:26,0:23:61.24:0,61,1083	0/0:22,0:21:48.04:0,48,1085	0/0:9,0:8:20.10:0,20,478
chr10	56171037	.	TGTGTGAGAGA	T	1154.01	PASS	AB=1.000;AC=16;AF=0.286;AN=56;BaseQRankSum=0.121;DP=527;FS=0.698;HRun=0;HaplotypeScore=145.5331;InbreedingCoeff=0.4606;MQ=43.26;MQ0=28;MQRankSum=2.497;QD=5.89;ReadPosRankSum=0.451;VQSLOD=2.2530;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:34:58.56:0,59,1309	0/1:10,0:10:15.25:66,0,15	0/0:1,0:1:2.99:0,3,24	0/0:4,0:2:3:0,3,29	0/0:24,0:23:27.09:0,27,721	1/1:15,0:15:7.54:150,8,0	1/1:14,0:13:3.01:36,3,0	0/0:22,0:18:11.82:0,12,91	0/0:14,0:14:30.90:0,31,635	0/0:29,0:27:78.52:0,79,1418	0/0:16,0:15:13.26:0,13,202	1/1:19,0:18:20.71:397,21,0	0/0:19,0:19:37.14:0,37,801	0/0:13,0:13:27.08:0,27,825	0/0:20,0:20:23.24:0,23,507	0/1:32,0:28:64.36:316,0,64	0/1:24,0:21:33.43:33,0,52	0/1:19,0:18:39.84:61,0,40	0/0:21,0:19:44.96:0,45,723	0/0:25,0:24:17.93:0,18,407	0/0:10,0:9:6.12:0,6,76	1/1:9,14:23:2.93:54,3,0	1/1:23,0:23:8.34:112,8,0	1/1:16,0:13:6.02:99,6,0	0/0:18,0:18:23.41:0,23,626	0/0:26,0:23:58.47:0,58,716	0/0:22,0:21:52.32:0,52,893	0/0:9,0:8:19.31:0,19,345
chr10	56171084	.	CAGAG	C	1026.05	PASS	AB=0.892;AC=12;AF=0.214;AN=56;BaseQRankSum=7.365;DP=708;FS=8.765;HRun=0;HaplotypeScore=158.8396;InbreedingCoeff=-0.2518;MQ=39.01;MQ0=27;MQRankSum=-8.972;QD=3.09;ReadPosRankSum=2.480;VQSLOD=2.2452;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:35:70.47:0,70,1597	0/0:8,3:9:12.04:0,12,300	0/1:20,0:3:7.15:10,0,7	0/0:57,0:5:6.28:0,6,59	0/0:15,0:14:30.10:0,30,610	0/1:16,4:18:17.23:17,0,251	0/0:32,0:28:36.59:0,37,745	0/1:43,1:42:38.93:39,0,1622	0/0:15,2:17:20.38:0,20,461	0/1:22,4:26:99:228,0,567	0/0:24,6:28:18.06:0,18,324	0/1:13,7:18:61.52:62,0,392	0/0:14,0:14:36.12:0,36,839	0/0:19,0:19:51.12:0,51,986	0/0:21,2:22:32.43:0,32,716	0/1:25,9:31:99:151,0,441	0/1:26,1:26:17.37:17,0,609	0/1:17,3:19:99:100,0,329	0/1:33,4:31:99:256,0,774	0/1:32,3:31:12.39:12,0,398	0/0:17,0:15:18.04:0,18,380	0/0:22,3:23:15.02:0,15,347	0/0:22,1:22:15.05:0,15,337	0/0:21,0:20:27.01:0,27,423	0/0:22,1:23:26.99:0,27,413	0/1:28,2:26:99:128,0,844	0/1:17,2:19:99:154,0,393	0/0:9,0:8:21.07:0,21,379
chr10	56173395	.	CAGAG	C	1817.10	PASS	AB=0.897;AC=21;AF=0.457;AN=46;BaseQRankSum=1.947;DP=740;FS=16.008;HRun=0;HaplotypeScore=113.1744;InbreedingCoeff=-0.0713;MQ=28.44;MQ0=165;MQRankSum=-5.138;QD=3.62;ReadPosRankSum=0.439;VQSLOD=1.3239;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:36:62.42:0,62,1257	1/1:3,11:11:0.47:1,0,0	./.	./.	0/0:19,0:14:17.24:0,17,304	0/1:18,9:21:32.37:45,0,32	1/1:23,3:16:2.67:31,3,0	1/1:19,21:25:57.01:778,57,0	0/1:13,0:12:2.64:46,0,3	0/1:16,2:20:99:161,0,125	./.	0/1:22,10:27:15.37:113,0,15	0/0:22,0:17:39.13:0,39,838	0/0:28,0:16:14.93:0,15,297	0/1:20,0:33:18.36:24,0,18	0/1:20,17:33:23.34:189,0,23	0/1:30,1:13:3.40:57,0,3	0/0:30,0:11:12.01:0,12,70	0/1:13,2:7:63.91:88,0,64	0/1:12,3:15:0:0,0,0	1/1:29,1:18:2.74:12,3,0	./.	./.	0/1:45,2:17:0:0,0,0	0/0:13,1:17:6.49:0,6,145	0/1:22,4:22:31.93:309,0,32	0/1:17,0:10:14.59:92,0,15	0/1:22,1:14:10.72:11,0,74
chr10	56173403	.	G	GAC	1242.97	PASS	AB=0.992;AC=17;AF=0.370;AN=46;BaseQRankSum=3.617;DP=708;FS=0.000;HRun=0;HaplotypeScore=112.4428;InbreedingCoeff=0.0430;MQ=29.54;MQ0=150;MQRankSum=-4.337;QD=3.31;ReadPosRankSum=2.296;VQSLOD=2.2697;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:35:66.12:0,66,916	0/0:16,0:13:2.60:0,3,24	./.	./.	0/0:19,0:16:24.02:0,24,289	1/1:19,7:20:9.43:105,9,0	1/1:20,2:13:2.64:34,3,0	0/1:39,0:21:74.64:79,0,75	0/1:22,0:15:8.70:47,0,9	0/1:27,0:20:99:144,0,136	./.	1/1:24,4:25:17.88:197,18,0	0/0:22,0:18:42.09:0,42,588	0/0:27,0:16:20.96:0,21,252	0/1:41,0:34:22.95:23,0,26	1/1:33,2:31:23.75:263,24,0	0/1:25,1:11:21.79:28,0,22	0/1:29,1:11:22.29:130,0,22	0/0:18,0:9:19.84:0,20,129	0/0:19,0:15:0:0,0,0	0/0:39,0:17:2.74:0,3,12	./.	./.	0/0:39,0:14:0:0,0,0	0/0:23,0:18:6.45:0,6,93	0/1:34,0:25:85.81:203,0,86	0/1:18,0:10:8.80:104,0,9	0/1:27,0:13:33.42:33,0,64
chr10	56173433	.	GAGAGAGAC	G	1694.38	PASS	AB=1.000;AC=22;AF=0.393;AN=56;BaseQRankSum=4.292;DP=657;FS=1.213;HRun=0;HaplotypeScore=139.0026;InbreedingCoeff=0.3957;MQ=35.63;MQ0=81;MQRankSum=-3.277;QD=5.95;ReadPosRankSum=-0.304;VQSLOD=2.2164;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:38:47.90:0,48,1519	0/0:14,0:12:5.71:0,6,202	0/0:18,0:3:0.47:0,0,1	0/0:36,0:4:3.31:0,3,15	0/0:22,0:20:33.11:0,33,966	0/0:25,0:24:25.74:0,26,381	1/1:24,0:20:2.64:14,3,0	0/0:52,0:28:59.74:0,60,749	1/1:24,0:18:17.87:240,18,0	0/1:19,0:15:38.88:297,0,39	1/1:9,0:9:2.92:34,3,0	0/0:26,0:26:34.66:0,35,342	0/0:19,0:19:42.31:0,42,780	0/0:14,0:13:24.08:0,24,718	1/1:29,0:23:14.68:197,15,0	0/0:37,0:36:35.68:0,36,385	0/1:22,0:15:2.74:3,0,130	0/0:18,0:10:11.10:0,11,74	0/1:21,0:11:14.26:243,0,14	1/1:9,7:15:5.85:65,6,0	1/1:24,0:12:3.01:36,3,0	0/0:20,0:18:22.43:0,22,259	0/0:25,0:24:0.65:0,1,207	0/1:30,0:17:6.73:7,0,96	0/1:15,0:13:11.20:11,0,11	0/1:22,0:19:99:287,0,106	1/1:13,0:8:10.63:240,11,0	1/1:16,0:11:17.65:198,18,0
chr10	56173441	.	CAG	C	1230.15	PASS	AB=0.916;AC=29;AF=0.518;AN=56;BaseQRankSum=5.583;DP=648;FS=1.283;HRun=0;HaplotypeScore=111.2819;InbreedingCoeff=-0.1573;MQ=38.12;MQ0=70;MQRankSum=-1.919;QD=2.62;ReadPosRankSum=-0.497;VQSLOD=1.8901;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:38:48.63:0,49,756	0/0:12,0:11:5.72:0,6,94	0/0:26,0:4:4.55:0,5,30	0/1:55,0:9:7.53:8,0,47	0/0:22,0:20:1.18:0,1,472	0/1:26,0:25:35.98:36,0,141	0/1:23,0:19:23.60:24,0,28	0/0:50,0:29:48.01:0,48,628	1/1:17,4:17:20.85:211,21,0	0/1:14,2:12:42.28:172,0,42	1/1:4,5:9:2.87:35,3,0	0/0:26,0:26:13.63:0,14,187	0/1:17,2:19:40.05:40,0,262	0/1:14,1:14:8.08:8,0,325	1/1:21,4:19:2.18:126,2,0	0/1:34,1:33:24.37:24,0,209	0/1:18,2:14:52.03:52,0,100	0/1:18,0:11:23.01:24,0,23	1/1:13,4:9:12.03:135,12,0	1/1:12,2:14:6.02:65,6,0	1/1:21,0:11:2.68:11,3,0	0/1:16,1:15:3.61:4,0,183	0/1:26,0:24:24.56:25,0,95	0/1:31,0:21:21.38:21,0,69	1/1:7,6:11:5.84:51,6,0	0/1:13,10:20:91.28:148,0,91	0/1:7,6:8:0.31:91,0,0	0/1:9,3:10:6.86:81,0,7
chr10	56176427	.	G	GCCT	26237.82	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-14.005;DP=709;FS=3.048;HRun=0;HaplotypeScore=93.7726;InbreedingCoeff=0.9844;MQ=81.66;MQ0=0;MQRankSum=-6.286;QD=47.97;ReadPosRankSum=3.119;VQSLOD=7.0648;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,105,1613	1/1:0,3:3:9.03:195,9,0	0/0:23,0:23:57.18:0,57,851	0/0:21,0:21:48.21:0,48,852	0/0:21,0:21:57.19:0,57,890	1/1:2,15:17:39.13:832,39,0	1/1:7,31:38:69.24:1474,69,0	1/1:5,17:23:57.18:1140,57,0	1/1:3,19:22:51.18:1083,51,0	1/1:5,17:23:57.18:1154,57,0	1/1:3,11:14:20.84:454,21,0	1/1:2,29:32:81.23:1715,81,0	0/0:23,0:23:66.21:0,66,1003	0/0:36,0:36:96.31:0,96,1465	1/1:0,26:26:69.24:1493,69,0	1/1:5,22:28:70.12:1460,70,0	1/1:4,39:44:99:2182,102,0	1/1:4,28:33:63.22:1326,63,0	1/1:6,18:25:57.20:1180,57,0	1/1:1,9:11:18.06:389,18,0	1/1:7,68:78:99:3671,172,0	1/1:1,9:10:21.07:454,21,0	1/1:1,11:12:24.08:519,24,0	1/1:1,30:31:81.28:1754,81,0	1/1:3,14:17:42.14:890,42,0	1/1:2,22:25:69.24:1418,69,0	1/1:5,16:22:42.14:871,42,0	1/1:5,8:13:27.09:584,27,0
chr10	56179701	.	A	ATTT	4096.07	PASS	AB=0.740;AC=29;AF=0.518;AN=56;BaseQRankSum=5.470;DP=494;FS=4.364;HRun=13;HaplotypeScore=97.9720;InbreedingCoeff=0.7914;MQ=62.56;MQ0=1;MQRankSum=-5.239;QD=14.79;ReadPosRankSum=-5.189;VQSLOD=1.1271;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:40:88.41:0,88,941	1/1:4,5:9:5.97:73,6,0	0/1:11,0:8:0:0,0,0	0/0:16,0:15:11.69:0,12,86	0/0:14,0:18:5.22:0,5,221	0/0:13,0:14:16.86:0,17,218	0/0:17,0:20:32.93:0,33,316	1/1:6,2:14:37.15:311,37,0	1/1:16,4:19:35.09:430,35,0	1/1:11,6:19:30.83:322,31,0	1/1:10,7:21:28.22:343,28,0	0/0:13,0:13:5.78:0,6,199	0/0:12,0:12:20.22:0,20,201	0/0:13,0:15:19.42:0,19,222	1/1:8,7:16:32.71:444,33,0	0/0:13,0:17:31.20:0,31,306	0/1:14,0:34:7.60:50,0,8	0/1:7,0:22:4.28:80,0,4	1/1:3,7:11:26.95:319,27,0	1/1:14,4:18:34.83:342,35,0	1/1:7,4:17:30.36:313,30,0	0/0:10,0:11:18.80:0,19,198	0/0:16,0:16:26.84:0,27,281	0/0:20,0:21:37.33:0,37,444	1/1:6,13:20:26.91:319,27,0	1/1:9,2:12:17.90:189,18,0	1/1:18,2:19:46.31:517,46,0	1/1:4,0:4:5.95:42,6,0
chr10	56183774	.	GCA	G	1943.87	PASS	AB=0.901;AC=31;AF=0.554;AN=56;BaseQRankSum=8.166;DP=345;FS=3.085;HRun=0;HaplotypeScore=45.2962;InbreedingCoeff=0.3230;MQ=69.85;MQ0=7;MQRankSum=0.835;QD=8.56;ReadPosRankSum=3.549;VQSLOD=2.7708;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:14,2:16:35.54:36,0,380	0/0:4,0:4:3.01:0,3,43	0/0:26,0:21:15.05:0,15,225	0/0:26,0:12:9.03:0,9,129	0/1:10,3:13:75.89:76,0,251	0/1:12,0:12:10.26:10,0,253	0/1:16,2:18:35.55:36,0,377	0/1:25,2:27:28.21:28,0,438	1/1:2,2:5:8.86:83,9,0	1/1:1,5:6:15.04:172,15,0	1/1:4,6:10:18.05:206,18,0	0/1:10,1:11:16.27:16,0,214	0/1:8,0:9:2.11:2,0,125	0/0:11,0:10:24.08:0,24,370	1/1:4,5:10:15.04:172,15,0	0/1:16,2:18:44.56:45,0,254	0/0:19,0:20:28.91:0,29,418	0/0:20,0:20:39.13:0,39,596	1/1:7,4:11:11.90:137,12,0	1/1:1,6:8:17.88:186,18,0	1/1:5,4:8:10.27:106,10,0	0/1:5,0:6:2.11:2,0,127	0/0:6,0:6:6.02:0,6,93	0/0:5,0:5:9.03:0,9,139	1/1:3,4:7:12.03:137,12,0	1/1:3,4:7:12.03:137,12,0	1/1:3,10:14:30.09:343,30,0	1/1:4,6:10:18.05:206,18,0
chr10	56183818	.	ATC	A	1030.68	PASS	AB=0.996;AC=6;AF=0.111;AN=54;BaseQRankSum=0.507;DP=377;FS=5.618;HRun=0;HaplotypeScore=51.9092;InbreedingCoeff=0.3770;MQ=83.57;MQ0=21;MQRankSum=-4.045;QD=6.52;ReadPosRankSum=-2.497;VQSLOD=1.7508;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:36.10:0,36,614	1/1:0,3:3:3.01:36,3,0	0/0:61,0:25:10.69:0,11,164	0/1:113,0:26:26.61:27,0,68	0/0:8,0:8:21.07:0,21,393	0/0:13,0:13:39.08:0,39,595	0/0:8,0:8:24.06:0,24,416	1/1:13,21:34:38.85:1081,39,0	0/0:1,0:1:2.99:0,3,24	0/0:5,0:5:15.02:0,15,209	0/0:8,0:8:12.04:0,12,223	0/0:6,0:6:18.06:0,18,345	0/0:6,0:6:18.06:0,18,322	0/1:6,0:6:6.90:7,0,237	0/0:3,0:3:6.01:0,6,83	0/0:7,0:7:21.01:0,21,272	0/0:15,0:15:45.09:0,45,708	0/0:17,0:17:51.09:0,51,811	0/0:2,0:2:5.82:0,6,36	0/0:5,0:5:11.77:0,12,121	0/0:6,0:6:11.99:0,12,123	0/0:4,0:4:12:0,12,132	0/0:3,0:3:9.03:0,9,171	./.	0/0:6,0:6:18.06:0,18,346	0/0:3,0:3:0.79:0,1,22	0/0:12,0:12:28.75:0,29,448	0/0:6,0:5:15.03:0,15,253
chr10	56184683	.	G	GAA	3620.30	PASS	AB=0.796;AC=18;AF=0.321;AN=56;BaseQRankSum=-3.150;DP=609;FS=6.675;HRun=13;HaplotypeScore=90.1409;InbreedingCoeff=0.7931;MQ=63.13;MQ0=10;MQRankSum=-0.771;QD=15.88;ReadPosRankSum=0.387;VQSLOD=2.7268;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:35:73.99:0,74,610	0/0:9,0:10:17.61:0,18,144	0/0:22,0:7:7.24:0,7,38	0/0:26,0:15:15.15:0,15,140	0/0:19,1:24:35.07:0,35,332	1/1:3,10:13:24.08:326,24,0	0/1:10,12:21:19.77:322,0,20	0/0:20,0:22:29.31:0,29,293	0/0:12,0:12:23.92:0,24,211	0/1:16,1:19:21.34:21,0,255	0/0:14,0:17:31.39:0,31,240	1/1:9,9:21:5.13:279,5,0	0/0:17,0:21:23.20:0,23,325	0/0:19,0:21:27.56:0,28,218	0/0:24,0:29:35:0,35,467	1/1:5,10:20:11.53:225,12,0	1/1:12,21:38:25.82:790,26,0	1/1:3,11:18:31.57:352,32,0	0/0:17,0:18:32.60:0,33,271	0/0:15,0:18:22.91:0,23,211	0/0:17,0:18:26.02:0,26,221	1/1:8,9:20:35.46:371,35,0	1/1:9,15:27:36.96:436,37,0	1/1:8,18:27:38.61:498,39,0	0/0:23,0:23:47.80:0,48,418	0/0:30,0:31:38.50:0,39,387	0/0:17,0:18:41.61:0,42,347	0/0:10,0:10:23.62:0,24,197
chr10	56185146	.	C	CA	1778.29	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-9.253;DP=701;FS=2.671;HRun=1;HaplotypeScore=64.0552;InbreedingCoeff=0.9839;MQ=81.14;MQ0=0;MQRankSum=-1.654;QD=39.52;ReadPosRankSum=-4.239;VQSLOD=2.5108;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,105,1344	1/1:0,5:5:12.04:180,12,0	0/0:26,0:25:67.99:0,68,832	0/0:18,0:18:51.15:0,51,646	0/0:20,0:20:60.20:0,60,779	0/0:22,0:22:66.20:0,66,842	0/0:25,0:25:72.20:0,72,904	1/1:0,40:40:99:1715,120,0	0/0:24,0:24:72.23:0,72,934	0/0:22,0:22:66.21:0,66,857	0/0:16,0:16:48.16:0,48,621	0/0:32,0:32:96.30:0,96,1231	0/0:33,0:33:99:0,99,1285	0/0:29,0:29:84.26:0,84,1075	0/0:43,0:44:99:0,105,1632	0/0:29,0:29:87.27:0,87,1117	0/0:24,0:24:69.20:0,69,878	0/0:19,0:19:57.10:0,57,718	0/0:21,0:21:57.18:0,57,733	0/0:17,0:17:51.15:0,51,648	0/0:33,0:33:96.31:0,96,1247	0/0:25,0:25:75.23:0,75,959	0/0:20,0:20:57.19:0,57,740	0/0:26,0:26:78.24:0,78,999	0/0:21,0:21:60.20:0,60,779	0/0:28,0:28:81.26:0,81,1052	0/0:25,0:25:72.23:0,72,934	0/0:20,0:20:60.19:0,60,777
chr10	56185544	.	GACAC	G	767.18	PASS	AB=0.833;AC=21;AF=0.477;AN=44;BaseQRankSum=4.778;DP=581;FS=13.290;HRun=0;HaplotypeScore=97.2558;InbreedingCoeff=0.5900;MQ=67.85;MQ0=13;MQRankSum=-1.347;QD=3.35;ReadPosRankSum=2.788;VQSLOD=0.9290;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:33,0:33:0.89:2,1,0	./.	./.	./.	1/1:7,1:8:3.01:46,3,0	0/1:16,4:20:8.83:40,0,9	1/1:20,3:24:3.48:46,3,0	./.	0/0:17,0:16:14.79:0,15,230	0/0:12,0:11:6.01:0,6,70	./.	1/1:19,1:21:6.01:74,6,0	0/0:14,0:14:12.04:0,12,239	0/0:19,0:19:15.05:0,15,297	0/0:18,0:18:12.93:0,13,198	1/1:20,14:35:4.08:282,4,0	1/1:13,0:15:6.01:56,6,0	1/1:15,0:16:6:56,6,0	0/0:14,0:14:3.01:0,3,42	0/0:13,0:13:6.02:0,6,104	0/0:57,0:56:23.98:0,24,296	1/1:13,2:15:2.94:46,3,0	./.	1/1:22,11:33:15.05:228,15,0	0/0:17,0:16:12.03:0,12,213	0/0:26,0:26:20.76:0,21,294	0/0:17,0:21:21.69:0,22,319	1/1:8,0:7:3:46,3,0
chr10	56187997	.	C	CA	1628.31	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-6.879;DP=877;FS=8.910;HRun=5;HaplotypeScore=80.6736;InbreedingCoeff=0.9999;MQ=85.35;MQ0=0;MQRankSum=1.284;QD=26.26;ReadPosRankSum=-4.256;VQSLOD=1.2677;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,114,1192	1/1:3,12:15:36.11:464,36,0	0/0:31,0:31:77.67:0,78,805	0/0:27,0:27:63.60:0,64,668	0/0:31,0:31:93.19:0,93,979	0/0:24,0:24:72.17:0,72,766	0/0:26,0:26:66.16:0,66,709	1/1:13,34:46:99:1286,102,0	0/0:27,0:27:78.20:0,78,838	0/0:29,0:29:81.20:0,81,870	0/0:17,0:17:48.11:0,48,508	0/0:25,0:25:69.15:0,69,732	0/0:26,0:26:75.15:0,75,782	0/0:34,0:34:90.22:0,90,967	0/0:47,0:47:99:0,126,1307	0/0:43,0:43:99:0,114,1225	0/0:31,0:31:84.14:0,84,872	0/0:30,0:30:78.19:0,78,838	0/0:32,0:32:78.19:0,78,831	0/0:38,0:38:99:0,102,1071	0/0:44,0:44:99:0,120,1281	0/0:33,0:33:84.19:0,84,894	0/0:24,0:24:66.15:0,66,701	0/0:34,0:34:87.16:0,87,915	0/0:28,0:28:78.18:0,78,829	0/0:40,0:40:99:0,105,1110	0/0:36,0:36:99:0,102,1076	0/0:17,0:17:51.05:0,51,519
chr10	56188600	.	AAC	A	3595.39	PASS	AB=0.834;AC=40;AF=0.769;AN=52;BaseQRankSum=4.576;DP=555;FS=0.643;HRun=0;HaplotypeScore=71.0577;InbreedingCoeff=0.3233;MQ=75.93;MQ0=8;MQRankSum=0.268;QD=8.21;ReadPosRankSum=1.200;VQSLOD=3.3128;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,2:43:14.94:0,15,567	0/0:8,0:8:12.04:0,12,174	./.	./.	0/1:17,5:22:78.42:78,0,128	1/1:14,14:31:23.39:188,23,0	1/1:13,6:19:11.87:114,12,0	0/1:23,1:24:35.78:36,0,113	1/1:4,2:6:6.02:65,6,0	0/1:14,4:18:2.87:269,0,3	0/1:12,1:14:17.84:90,0,18	0/1:12,10:24:9.65:158,0,10	0/0:8,0:8:18.02:0,18,244	0/1:18,2:19:2.18:2,0,359	1/1:6,8:15:11.70:94,12,0	1/1:12,6:18:1.51:79,2,0	1/1:18,5:32:41.04:336,41,0	1/1:9,9:18:16.44:196,16,0	1/1:9,0:12:2.60:91,3,0	1/1:16,4:20:23.76:225,24,0	1/1:19,0:19:27.04:244,27,0	1/1:9,9:18:11.70:111,12,0	1/1:3,5:8:9.02:100,9,0	1/1:17,18:35:27.07:298,27,0	1/1:11,1:16:29.24:236,29,0	1/1:14,12:27:31.42:306,31,0	1/1:2,5:8:11.87:113,12,0	1/1:5,6:11:15.04:166,15,0
chr10	56191019	.	C	CT	539.96	PASS	AB=0.902;AC=8;AF=0.143;AN=56;BaseQRankSum=-5.318;DP=644;FS=1.329;HRun=12;HaplotypeScore=82.2482;InbreedingCoeff=0.1753;MQ=66.76;MQ0=0;MQRankSum=-0.458;QD=4.35;ReadPosRankSum=-2.698;VQSLOD=1.0227;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:49,1:54:85.58:0,86,748	0/1:5,5:11:10.70:99,0,11	0/1:12,0:12:17.78:18,0,51	0/0:11,0:11:11.85:0,12,87	0/0:18,0:21:42.78:0,43,294	0/0:12,0:13:22.82:0,23,151	0/0:13,0:14:31.83:0,32,224	1/1:8,23:32:19.27:506,19,0	0/0:15,0:15:29.75:0,30,213	0/0:32,0:34:63.34:0,63,448	0/0:8,0:9:19.89:0,20,137	0/0:24,2:26:14.56:0,15,273	0/0:29,0:29:47.55:0,48,350	0/0:23,0:25:45.71:0,46,318	0/0:30,4:34:48.37:0,48,518	0/0:25,0:25:44.66:0,45,328	0/0:29,2:31:12.20:0,12,405	0/1:20,2:25:0.41:0,0,251	0/1:17,3:21:29.91:30,0,184	0/1:10,0:10:11.09:11,0,90	0/0:25,0:25:50.56:0,51,364	0/0:21,0:21:44.68:0,45,328	0/1:11,1:12:5.63:6,0,119	0/0:38,0:42:97.56:0,98,680	0/0:16,0:17:34.05:0,34,243	0/0:35,1:39:50.77:0,51,500	0/0:23,0:25:49.62:0,50,356	0/0:7,0:8:16.92:0,17,115
chr10	56193672	.	C	CA	2166.92	PASS	AB=0.711;AC=21;AF=0.389;AN=54;BaseQRankSum=-5.848;DP=518;FS=0.000;HRun=11;HaplotypeScore=62.8225;InbreedingCoeff=0.6877;MQ=76.43;MQ0=13;MQRankSum=-0.555;QD=13.05;ReadPosRankSum=-0.617;VQSLOD=3.3267;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,1:27:15.66:0,16,411	0/1:2,0:3:8.47:8,0,17	0/0:67,0:24:23.44:0,23,193	0/0:52,2:18:6.87:0,7,55	0/0:17,0:17:10.67:0,11,251	0/0:17,0:17:32.83:0,33,255	0/0:16,0:17:34.90:0,35,261	1/1:8,14:23:21.42:335,21,0	0/1:5,7:12:5.20:131,0,5	1/1:2,12:14:27.04:267,27,0	1/1:3,4:6:11.96:107,12,0	0/0:18,0:19:40.83:0,41,302	0/0:11,0:11:23.88:0,24,184	0/0:15,1:16:3.92:0,4,222	1/1:3,13:18:8.83:290,9,0	0/0:14,0:14:26.86:0,27,209	0/0:30,0:33:69.78:0,70,522	0/0:40,0:40:81.81:0,82,724	0/1:8,4:12:4.85:120,0,5	./.	1/1:3,3:6:6.01:61,6,0	0/0:3,0:3:8.95:0,9,68	0/0:4,0:4:11.64:0,12,80	0/0:10,0:10:23.89:0,24,184	1/1:2,11:14:17.87:167,18,0	1/1:3,15:18:39.08:393,39,0	1/1:7,18:26:9.05:306,9,0	1/1:2,10:13:2.24:175,2,0
chr10	56194150	.	AT	A	4466.25	PASS	AB=0.520;AC=43;AF=0.768;AN=56;BaseQRankSum=0.124;DP=314;FS=8.947;HRun=9;HaplotypeScore=38.2979;InbreedingCoeff=0.7287;MQ=76.65;MQ0=0;MQRankSum=0.312;QD=20.30;ReadPosRankSum=1.990;VQSLOD=4.8699;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:45.09:0,45,505	1/1:1,2:3:6:55,6,0	0/0:22,0:18:4.61:0,5,134	0/0:23,0:13:4.48:0,4,92	0/0:13,0:13:36.11:0,36,416	1/1:0,1:1:3:27,3,0	1/1:0,15:15:42.02:384,42,0	1/1:3,16:19:47.99:431,48,0	1/1:1,6:7:15.01:137,15,0	1/1:2,11:13:33:294,33,0	1/1:3,6:9:14.95:129,15,0	1/1:1,10:11:18.90:167,19,0	0/0:8,0:8:21.06:0,21,236	0/0:9,0:9:21:0,21,217	1/1:0,5:5:9:82,9,0	1/1:0,6:6:12.01:110,12,0	1/1:0,20:20:48.03:438,48,0	1/1:3,23:26:60.03:548,60,0	1/1:3,13:16:38.99:349,39,0	1/1:2,1:3:5.95:47,6,0	1/1:0,4:4:9:82,9,0	1/1:0,5:5:15.01:137,15,0	1/1:0,5:5:12.01:110,12,0	0/1:1,12:13:4.66:216,0,5	1/1:5,13:18:20.09:286,20,0	1/1:3,9:12:5.49:218,5,0	1/1:1,4:5:12:110,12,0	1/1:0,4:4:12.01:109,12,0
chr10	56203413	.	G	GTTCA	19974.32	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-14.345;DP=782;FS=6.828;HRun=0;HaplotypeScore=115.8662;InbreedingCoeff=0.9964;MQ=77.81;MQ0=1;MQRankSum=-5.460;QD=64.85;ReadPosRankSum=2.476;VQSLOD=6.9318;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,102,1860	0/0:13,0:13:33.10:0,33,585	0/0:19,0:19:42.14:0,42,784	0/0:18,0:18:48.08:0,48,809	0/0:20,0:20:60.21:0,60,1105	1/1:2,18:22:60.16:1502,60,0	1/1:5,21:29:72.20:1824,72,0	0/0:44,0:43:99:0,111,1959	0/0:32,0:32:13.46:0,13,1440	0/0:34,0:34:99:0,99,1784	0/0:17,0:17:39.11:0,39,657	1/1:6,61:69:99:4627,178,0	0/0:24,0:24:63.22:0,63,1174	0/0:34,0:34:96.33:0,96,1791	0/0:36,0:36:99:0,99,1818	1/1:5,61:67:99:4845,184,0	1/1:3,18:21:45.15:1199,45,0	1/1:5,24:29:63.22:1655,63,0	0/0:15,0:15:36.11:0,36,637	0/0:15,0:15:42.14:0,42,783	0/0:51,0:51:99:0,147,2684	1/1:5,20:27:69.24:1682,69,0	1/1:3,15:18:48.16:1176,48,0	1/1:3,22:25:57.20:1464,57,0	0/0:15,0:15:42.12:0,42,713	0/0:19,0:19:51.17:0,51,944	0/0:19,0:19:57.20:0,57,1063	0/0:14,0:14:39.13:0,39,716
chr10	56210078	.	G	GC	3605.30	PASS	AB=0.785;AC=42;AF=0.955;AN=44;BaseQRankSum=-3.140;DP=106;FS=0.000;HRun=0;HaplotypeScore=22.5140;InbreedingCoeff=-0.1472;MQ=83.01;MQ0=0;MQRankSum=-0.242;QD=34.01;ReadPosRankSum=1.124;VQSLOD=2.8545;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,4:4:12.04:192,12,0	./.	0/1:8,5:9:2.47:198,0,2	0/1:8,2:10:43.09:106,0,43	./.	1/1:0,2:2:6.02:96,6,0	1/1:0,14:14:36.12:575,36,0	1/1:1,8:9:24.07:361,24,0	1/1:0,1:1:3.01:48,3,0	1/1:0,1:1:3.01:48,3,0	./.	1/1:0,3:4:12.04:184,12,0	1/1:0,3:3:6.02:96,6,0	./.	1/1:0,1:1:3.01:48,3,0	1/1:0,2:2:6.02:96,6,0	1/1:0,2:3:9.03:137,9,0	1/1:0,3:3:6.02:96,6,0	1/1:0,1:1:3.01:48,3,0	./.	1/1:3,21:24:54.18:855,54,0	1/1:0,1:1:3.01:48,3,0	1/1:0,1:1:3.01:48,3,0	1/1:0,3:3:9.03:143,9,0	1/1:1,0:1:3.01:40,3,0	1/1:0,1:1:3.01:48,3,0	1/1:0,3:3:6.02:96,6,0	./.
chr10	56217537	.	GAC	G	53.82	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=3.178;DP=968;FS=10.747;HRun=0;HaplotypeScore=177.9560;InbreedingCoeff=0.5145;MQ=55.70;MQ0=29;MQRankSum=-0.070;QD=1.08;ReadPosRankSum=0.467;VQSLOD=2.1901;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:64,1:65:99:0,115,2369	0/0:18,1:19:12.99:0,13,754	0/0:44,1:9:6.56:0,7,210	0/0:48,0:11:6.46:0,6,88	0/0:22,0:22:60.18:0,60,960	0/0:18,0:17:32.93:0,33,439	0/0:28,0:26:41.81:0,42,618	0/0:57,0:51:99:0,99,1550	0/0:40,0:40:93.30:0,93,1490	0/0:45,0:43:99:0,114,1784	0/0:18,1:19:12.99:0,13,757	0/0:24,0:24:41.97:0,42,631	0/0:35,0:35:87.25:0,87,1395	0/0:37,1:38:87.28:0,87,1405	0/0:55,0:55:99:0,147,2332	0/0:25,0:25:41.97:0,42,573	0/0:24,0:24:45.14:0,45,649	0/0:26,0:24:56.97:0,57,778	0/1:25,0:20:40.17:40,0,464	0/0:21,0:21:49.69:0,50,749	0/0:105,0:103:99:0,199,3453	1/1:18,7:25:14.90:115,15,0	0/0:19,0:19:8.88:0,9,126	0/0:40,0:40:44.99:0,45,636	0/0:35,0:35:83.89:0,84,1327	0/0:34,0:32:87.28:0,87,1385	0/0:22,0:22:41.87:0,42,645	0/0:9,0:9:21.05:0,21,286
chr10	56217553	.	CACAG	C	1544.04	PASS	AB=0.935;AC=13;AF=0.232;AN=56;BaseQRankSum=4.588;DP=933;FS=5.702;HRun=0;HaplotypeScore=191.2602;InbreedingCoeff=0.6497;MQ=52.96;MQ0=37;MQRankSum=-0.314;QD=8.87;ReadPosRankSum=-2.770;VQSLOD=1.9939;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:66,0:65:99:0,173,3982	0/0:19,0:19:51.16:0,51,1217	0/0:44,0:7:6.50:0,7,70	0/0:58,0:9:13.53:0,14,288	0/0:26,0:26:75.22:0,75,1791	1/1:14,1:14:12.44:137,12,0	1/1:21,1:19:23.91:312,24,0	0/0:56,0:52:99:0,135,3080	0/0:39,0:39:99:0,100,2253	0/0:46,0:44:99:0,117,2628	0/0:22,0:22:63.22:0,63,1595	1/1:22,1:23:12.05:238,12,0	0/0:34,0:34:99:0,99,2360	0/0:36,0:36:99:0,99,2408	0/0:56,0:55:99:0,156,3791	1/1:20,1:21:15.92:160,16,0	0/1:19,1:20:11.93:227,0,12	0/1:20,3:21:83.64:309,0,84	0/0:25,0:14:34.08:0,34,826	0/0:19,0:19:54.18:0,54,1362	0/0:104,0:102:99:0,248,5981	1/1:20,0:20:14.99:159,15,0	0/0:14,0:14:0:0,0,0	0/1:29,1:30:51.26:178,0,51	0/0:33,0:33:86.77:0,87,2026	0/0:37,0:36:99:0,105,2428	0/0:17,0:17:46.75:0,47,1065	0/0:7,0:7:15.03:0,15,346
chr10	56217555	.	CAG	C	575.80	PASS	AB=0.995;AC=12;AF=0.214;AN=56;BaseQRankSum=6.375;DP=929;FS=3.413;HRun=0;HaplotypeScore=167.4112;InbreedingCoeff=0.2433;MQ=52.79;MQ0=37;MQRankSum=0.090;QD=2.41;ReadPosRankSum=-4.940;VQSLOD=0.6293;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:68,0:67:99:0,179,3034	0/0:19,0:19:51.15:0,51,874	0/0:45,0:8:9.99:0,10,132	0/1:56,0:8:5.08:5,0,219	0/0:26,0:26:75.20:0,75,1329	0/1:15,0:14:11.13:57,0,11	1/1:21,0:18:22.20:138,22,0	0/0:57,0:53:99:0,141,2371	0/0:36,1:37:99:0,99,1730	0/0:42,1:41:77.22:0,77,1867	0/0:24,0:24:69.20:0,69,1220	0/1:22,0:22:49.04:70,0,49	0/0:36,0:36:99:0,105,1832	0/0:36,0:36:99:0,99,1739	0/0:57,0:56:99:0,162,2867	0/1:20,0:20:12.17:94,0,12	0/1:20,0:20:40.88:75,0,41	0/1:22,1:21:99:100,0,155	0/0:26,0:14:34.06:0,34,604	0/0:19,0:19:54.18:0,54,1013	0/0:102,1:100:99:0,256,4524	1/1:13,7:20:14.99:134,15,0	0/1:14,0:14:0:0,0,0	0/1:28,0:28:55.63:57,0,56	0/0:32,0:32:89.79:0,90,1544	0/0:38,0:37:99:0,108,1893	0/0:17,0:17:46.69:0,47,788	0/0:7,0:7:15.03:0,15,254
chr10	56217577	.	A	AC	134.80	PASS	AB=0.942;AC=8;AF=0.143;AN=56;BaseQRankSum=7.584;DP=935;FS=12.647;HRun=0;HaplotypeScore=157.0741;InbreedingCoeff=0.0588;MQ=51.54;MQ0=37;MQRankSum=1.847;QD=0.91;ReadPosRankSum=-4.702;VQSLOD=0.0178;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:66,0:64:99:0,171,2319	0/0:14,0:14:35.98:0,36,474	0/0:33,0:3:6.02:0,6,81	0/0:43,0:6:17.42:0,17,203	0/0:27,0:27:69.22:0,69,938	0/1:13,0:13:29.22:29,0,42	1/1:17,0:14:1.39:21,1,0	0/0:68,0:58:99:0,118,1934	0/0:36,0:36:99:0,105,1410	0/0:52,0:51:99:0,144,1882	0/0:27,0:27:78.25:0,78,1064	0/1:22,3:25:82.88:83,0,88	0/0:40,0:40:99:0,117,1605	0/0:35,0:35:99:0,102,1416	0/0:58,0:57:99:0,156,2120	0/1:23,2:24:24.95:25,0,45	0/1:18,1:19:12:12,0,99	0/1:22,1:22:40.31:40,0,154	0/0:23,0:15:45.13:0,45,591	0/0:21,0:21:57.05:0,57,720	0/0:105,0:100:99:0,257,3399	0/0:16,0:15:2.92:0,3,8	0/0:15,0:15:0.47:0,0,1	0/1:23,1:24:47.76:53,0,48	0/0:29,0:29:81.27:0,81,1110	0/0:45,0:40:99:0,117,1534	0/0:20,0:19:54.17:0,54,737	0/0:14,0:13:39.13:0,39,537
chr10	56217727	.	GAC	G	2998.68	PASS	AB=0.886;AC=29;AF=0.518;AN=56;BaseQRankSum=4.537;DP=851;FS=15.837;HRun=0;HaplotypeScore=146.1567;InbreedingCoeff=0.1903;MQ=51.87;MQ0=29;MQRankSum=0.487;QD=4.64;ReadPosRankSum=3.347;VQSLOD=1.7748;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:35,0:34:0.45:0,0,301	0/1:13,3:15:3.84:148,0,4	0/0:9,0:3:2.96:0,3,19	0/0:22,0:2:2.94:0,3,18	0/0:11,0:11:15.05:0,15,218	1/1:11,14:25:0.54:211,1,0	1/1:20,15:35:16.91:118,17,0	1/1:51,2:41:8.55:175,9,0	0/1:21,5:27:0.66:1,0,385	0/1:29,8:35:71.86:72,0,428	0/0:13,0:13:21.07:0,21,310	1/1:16,13:30:19.43:184,19,0	0/1:29,1:31:0.69:1,0,505	0/0:25,1:25:6.92:0,7,431	0/0:37,0:38:1.59:0,2,724	1/1:26,7:33:44.42:446,44,0	1/1:22,13:34:9.78:253,10,0	1/1:24,7:27:19.55:333,20,0	0/1:36,0:24:55.69:56,0,101	0/1:22,2:23:45.58:46,0,296	0/0:77,0:76:32.51:0,33,796	0/1:12,11:21:31.05:99,0,31	1/1:20,2:22:26.53:241,27,0	1/1:41,30:74:56.52:578,57,0	0/1:17,4:22:56.11:56,0,195	0/1:25,1:25:62.88:63,0,288	0/1:23,3:26:95.45:95,0,298	0/0:9,0:9:21.07:0,21,309
chr10	56219620	.	TGCC	T	4250.83	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-0.679;DP=316;FS=7.620;HRun=0;HaplotypeScore=47.4673;InbreedingCoeff=0.8184;MQ=73.01;MQ0=6;MQRankSum=0.685;QD=16.60;ReadPosRankSum=-0.577;VQSLOD=3.2089;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:33.65:0,34,218	1/1:3,0:3:8.98:72,9,0	0/0:9,0:5:3.01:0,3,32	0/0:9,0:8:5.89:0,6,39	0/0:8,0:8:16.79:0,17,127	1/1:12,0:11:23.71:174,24,0	1/1:17,0:17:32.88:265,33,0	1/1:16,0:16:47.96:421,48,0	1/1:16,0:14:35.18:260,35,0	1/1:5,16:21:47.79:394,48,0	1/1:6,3:9:9.32:69,9,0	1/1:15,0:14:28.01:201,28,0	0/0:8,0:8:3.36:0,3,103	0/0:13,0:11:26.58:0,27,194	1/1:1,12:13:5.94:43,6,0	1/1:11,0:11:28.86:211,29,0	1/1:1,7:8:5.95:44,6,0	1/1:11,0:11:23.90:188,24,0	1/1:11,4:14:35.83:288,36,0	1/1:3,0:3:8.93:65,9,0	1/1:16,0:15:32.75:248,33,0	1/1:11,0:10:20.34:158,20,0	1/1:4,0:4:11.94:92,12,0	1/1:12,0:12:32.92:266,33,0	1/1:9,0:8:23.86:185,24,0	1/1:12,0:12:29.82:236,30,0	1/1:12,0:12:26.68:183,27,0	1/1:10,0:10:23.92:190,24,0
chr10	56224488	.	C	CAA	3660.93	PASS	AB=0.827;AC=42;AF=0.750;AN=56;BaseQRankSum=-0.865;DP=528;FS=16.348;HRun=16;HaplotypeScore=83.9110;InbreedingCoeff=0.4327;MQ=78.04;MQ0=4;MQRankSum=-0.618;QD=8.17;ReadPosRankSum=-0.845;VQSLOD=-0.4058;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:32:6.57:7,0,193	1/1:3,1:9:6.01:65,6,0	0/1:47,0:26:9.79:10,0,12	0/0:23,0:15:2.31:0,2,6	0/0:22,0:23:21.09:0,21,255	0/1:7,13:21:6.76:164,0,7	0/1:7,0:14:0:1,0,0	1/1:22,2:25:44.93:296,45,0	1/1:7,0:10:8.54:53,9,0	1/1:5,1:21:31.27:232,31,0	1/1:11,8:20:19.29:179,19,0	0/1:15,0:15:0.02:79,0,0	0/0:14,0:16:17:0,17,92	0/0:17,0:18:5.75:0,6,70	1/1:3,0:10:6.01:57,6,0	1/1:2,9:13:14.87:147,15,0	1/1:26,5:34:79.59:655,80,0	1/1:4,19:26:20.03:192,20,0	1/1:8,15:22:39.78:279,40,0	1/1:3,0:9:14.51:118,15,0	1/1:5,1:10:11.99:111,12,0	1/1:2,5:7:14.84:116,15,0	0/1:8,4:13:14.02:37,0,14	1/1:3,1:13:13.87:118,14,0	1/1:5,1:16:15.02:149,15,0	1/1:27,0:26:46.31:315,46,0	1/1:15,1:19:9.93:196,10,0	1/1:3,1:9:8.98:85,9,0
chr10	56225258	.	TGG	T	3823.03	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=-3.495;DP=506;FS=3.173;HRun=11;HaplotypeScore=77.4750;InbreedingCoeff=0.9096;MQ=74.41;MQ0=0;MQRankSum=0.548;QD=21.97;ReadPosRankSum=5.944;VQSLOD=3.2639;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:37:67.51:0,68,809	0/0:3,0:10:11.80:0,12,147	0/0:19,0:17:29.65:0,30,318	0/1:9,0:7:6.88:7,0,21	0/0:16,0:17:34.96:0,35,457	0/0:12,0:26:45.10:0,45,520	0/0:12,0:20:44.05:0,44,465	0/0:6,0:11:18.04:0,18,210	1/1:1,12:13:30.07:319,30,0	1/1:3,5:8:21.05:223,21,0	1/1:3,6:9:15.03:160,15,0	0/0:9,0:22:20.53:0,21,198	0/0:11,0:16:37.05:0,37,405	0/0:16,0:17:35.59:0,36,488	1/1:3,13:16:29.88:318,30,0	0/0:10,0:25:42.02:0,42,439	0/0:15,0:34:48.10:0,48,544	0/0:11,0:26:24.06:0,24,295	1/1:3,15:18:42.05:433,42,0	1/1:3,10:13:27.04:287,27,0	1/1:8,29:37:78.16:830,78,0	0/0:7,0:14:10.27:0,10,124	0/0:7,0:14:8.59:0,9,80	0/0:7,0:22:42.09:0,42,485	1/1:3,11:14:33.08:351,33,0	1/1:2,13:17:35.78:418,36,0	1/1:4,11:15:33.05:349,33,0	1/1:0,5:5:12.03:128,12,0
chr10	56227222	.	CT	C	471.14	PASS	AB=0.982;AC=11;AF=0.196;AN=56;BaseQRankSum=8.195;DP=586;FS=3.956;HRun=1;HaplotypeScore=124.7843;InbreedingCoeff=-0.1231;MQ=42.51;MQ0=29;MQRankSum=-8.929;QD=2.21;ReadPosRankSum=0.884;VQSLOD=-0.5301;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:37:72.21:0,72,851	0/1:10,0:8:13.76:14,0,128	0/0:13,0:3:9.03:0,9,114	0/0:26,0:5:9:0,9,97	0/0:20,0:19:36.23:0,36,404	0/0:24,0:20:27.24:0,27,346	0/0:26,0:24:24.83:0,25,387	0/0:35,0:35:63.10:0,63,836	0/1:18,1:19:68.85:77,0,69	0/1:32,0:28:55.48:55,0,732	0/0:13,0:13:18.06:0,18,244	0/0:21,0:20:26.95:0,27,289	0/0:19,0:19:46.49:0,46,585	0/0:22,0:20:36.60:0,37,426	0/1:25,2:26:23.55:24,0,118	0/0:13,0:13:24.07:0,24,309	0/0:9,0:6:15.05:0,15,192	0/0:10,0:7:11.32:0,11,181	0/1:21,1:22:99:137,0,353	0/1:18,0:18:10.65:11,0,122	0/0:12,1:10:6.02:0,6,86	0/0:19,1:19:20.62:0,21,250	0/0:22,1:19:36.12:0,36,464	0/0:26,0:21:26.95:0,27,373	1/1:14,1:14:0.81:2,1,0	0/1:30,0:30:99:132,0,757	0/1:17,0:15:99:152,0,141	0/1:23,0:21:0.98:1,0,561
chr10	56227237	.	TCACACACACA	T	2242.93	PASS	AB=0.784;AC=20;AF=0.370;AN=54;BaseQRankSum=8.676;DP=464;FS=10.063;HRun=0;HaplotypeScore=166.9944;InbreedingCoeff=0.6961;MQ=40.44;MQ0=23;MQRankSum=-8.688;QD=13.43;ReadPosRankSum=1.969;VQSLOD=1.9189;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:46:80.01:0,80,2465	1/1:3,0:4:8.53:50,9,0	0/0:4,0:2:6.02:0,6,253	./.	0/0:19,0:18:26.03:0,26,618	0/0:20,0:16:11.34:0,11,496	0/0:23,0:21:20.88:0,21,764	0/0:23,0:23:5.74:0,6,18	1/1:14,4:19:15.26:303,15,0	1/1:21,4:23:15.04:429,15,0	0/1:6,1:7:0:0,0,0	0/0:19,0:18:20.90:0,21,830	0/0:18,0:18:32.50:0,32,1128	0/0:24,0:23:30.06:0,30,928	1/1:18,8:27:17.30:188,17,0	0/0:14,0:14:21.07:0,21,862	0/0:10,0:7:18.06:0,18,662	0/0:9,0:6:6.02:0,6,182	1/1:8,3:10:1.40:356,1,0	1/1:9,6:15:9.03:114,9,0	0/0:12,1:11:0:0,0,0	0/0:14,0:13:17.15:0,17,642	0/0:9,0:5:6.02:0,6,270	0/0:26,0:21:13.21:0,13,575	1/1:8,4:12:3.44:22,3,0	1/1:15,4:20:8.42:381,8,0	1/1:7,4:11:11.48:345,11,0	0/1:5,3:8:20.14:236,0,20
chr10	56227292	.	CGTAT	C	4021.20	PASS	AB=0.826;AC=23;AF=0.442;AN=52;BaseQRankSum=12.236;DP=556;FS=2.935;HRun=0;HaplotypeScore=156.0509;InbreedingCoeff=0.6914;MQ=52.39;MQ0=11;MQRankSum=-0.948;QD=16.48;ReadPosRankSum=-1.264;VQSLOD=3.4817;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:54.19:0,54,1226	0/0:5,0:5:6.02:0,6,141	./.	./.	0/0:25,0:25:51.17:0,51,1155	0/0:22,0:20:33.11:0,33,773	0/0:21,0:21:33.10:0,33,729	0/0:32,0:31:15.05:0,15,262	1/1:11,12:23:33.05:511,33,0	1/1:7,8:15:24.08:372,24,0	1/1:5,6:10:14.36:232,14,0	0/1:18,1:20:13.51:14,0,662	0/0:16,0:16:27.09:0,27,627	0/0:26,0:26:1.72:0,2,1001	1/1:15,4:19:7.56:138,8,0	0/0:27,0:27:63.18:0,63,1344	0/0:15,0:13:30.08:0,30,645	0/0:12,0:11:21.07:0,21,479	1/1:13,7:21:24.06:331,24,0	1/1:7,9:16:23.14:371,23,0	0/1:10,18:27:37.69:432,0,38	0/0:17,0:17:21.07:0,21,494	0/0:9,0:7:12.04:0,12,280	0/1:23,1:22:16.49:16,0,574	1/1:8,7:15:19.83:324,20,0	1/1:10,18:28:51.16:769,51,0	1/1:6,9:15:23.81:372,24,0	1/1:6,3:9:9.03:139,9,0
chr10	56231912	.	T	TGAG	10786.04	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=6.876;DP=651;FS=17.821;HRun=0;HaplotypeScore=100.2963;InbreedingCoeff=0.9679;MQ=55.83;MQ0=15;MQRankSum=-0.567;QD=49.94;ReadPosRankSum=1.267;VQSLOD=5.7219;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:38:84.26:0,84,1403	0/0:14,0:14:42.14:0,42,716	0/0:17,0:8:14.42:0,14,249	0/0:20,0:8:18.06:0,18,277	0/0:13,0:13:33.11:0,33,563	1/1:5,19:24:48.12:1055,48,0	1/1:1,18:20:51.17:1133,51,0	0/0:29,0:26:66.21:0,66,1092	0/0:21,0:20:45.15:0,45,767	0/0:24,0:24:66.21:0,66,1073	0/0:11,0:11:33.11:0,33,563	1/1:2,28:30:72.19:1603,72,0	0/0:29,0:29:78.22:0,78,1284	0/0:17,0:17:44.72:0,45,737	0/0:27,0:26:60.21:0,60,1023	1/1:1,18:19:3.01:1094,3,0	1/1:4,25:28:69.24:1579,69,0	1/1:5,16:20:45.15:1037,45,0	0/0:21,0:20:57.19:0,57,971	0/0:15,0:15:39.13:0,39,665	0/0:51,0:51:99:0,126,2149	1/1:5,24:30:66.23:1487,66,0	1/1:0,16:17:24.06:553,24,0	1/1:2,22:24:54.19:1245,54,0	0/0:18,0:18:45.15:0,45,768	0/0:23,0:22:63.18:0,63,1033	0/0:28,0:28:75.25:0,75,1228	0/0:16,0:16:45.15:0,45,767
chr10	56233577	.	CT	C	3918.84	PASS	AB=0.807;AC=28;AF=0.500;AN=56;BaseQRankSum=-2.805;DP=546;FS=0.000;HRun=12;HaplotypeScore=72.6458;InbreedingCoeff=0.6410;MQ=62.69;MQ0=5;MQRankSum=4.078;QD=11.63;ReadPosRankSum=3.877;VQSLOD=3.5153;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,1:37:48.74:0,49,651	1/1:4,13:17:11.40:271,11,0	0/0:8,0:6:2.99:0,3,24	0/1:11,3:12:19.10:19,0,67	0/1:19,2:20:1.14:1,0,321	0/0:15,0:13:17.19:0,17,106	0/0:2,0:13:4.09:0,4,17	1/1:11,18:30:54.09:401,54,0	1/1:8,21:29:56.75:441,57,0	1/1:6,14:21:22.39:284,22,0	0/1:3,17:20:7.09:317,0,7	0/0:17,0:17:5.35:0,5,40	0/0:11,0:11:15.01:0,15,144	0/0:14,0:15:29.82:0,30,260	1/1:6,15:22:37.88:284,38,0	0/1:19,1:20:0.76:1,0,96	0/0:20,0:19:22.77:0,23,152	0/0:17,0:16:3.45:0,3,23	1/1:7,15:22:12.44:275,12,0	1/1:6,12:18:32.84:255,33,0	1/1:6,16:23:46.85:354,47,0	0/0:4,0:19:8.56:0,9,43	0/0:13,0:13:14.45:0,14,99	0/0:19,0:17:13.96:0,14,68	1/1:3,23:27:58.79:447,59,0	1/1:10,16:26:41.75:320,42,0	1/1:9,14:22:2.39:202,2,0	1/1:1,2:3:5.97:46,6,0
chr10	56233720	.	CACGCGT	C	1050.28	PASS	AB=0.635;AC=14;AF=0.250;AN=56;BaseQRankSum=6.720;DP=462;FS=5.963;HRun=0;HaplotypeScore=113.4453;InbreedingCoeff=0.6796;MQ=66.97;MQ0=5;MQRankSum=-6.930;QD=7.45;ReadPosRankSum=-0.447;VQSLOD=1.9758;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:22:59.32:0,59,1614	0/0:12,0:11:26.47:0,26,465	0/1:10,0:9:7.26:7,0,70	0/0:15,0:9:23.19:0,23,358	0/0:16,0:16:35.94:0,36,823	1/1:1,14:14:9.03:226,9,0	1/1:0,23:23:6.96:124,7,0	0/0:21,0:21:60.15:0,60,1006	0/0:13,0:13:39.13:0,39,1134	0/0:22,0:22:66.21:0,66,1901	0/0:13,0:13:36.07:0,36,912	1/1:0,13:13:9.03:201,9,0	0/0:9,0:9:27.08:0,27,740	0/0:16,0:16:45.13:0,45,1211	0/0:13,0:13:39.11:0,39,951	0/1:1,10:11:69.42:69,0,74	1/1:0,24:24:12.30:201,12,0	1/1:1,15:16:20.55:383,21,0	0/0:13,0:13:39.11:0,39,1029	0/0:14,0:14:39.12:0,39,1158	0/0:46,0:46:99:0,120,3384	0/1:0,10:10:0:1,0,0	0/0:0,4:4:0:0,0,0	0/1:1,17:17:0.01:0,0,0	0/0:27,0:25:78.20:0,78,2174	0/0:27,0:27:78.23:0,78,2041	0/0:14,0:14:42.13:0,42,1100	0/0:3,0:3:9.03:0,9,170
chr10	56233726	.	TGC	T	338.25	PASS	AB=1.000;AC=21;AF=0.389;AN=54;BaseQRankSum=6.571;DP=467;FS=0.698;HRun=0;HaplotypeScore=91.4375;InbreedingCoeff=0.4614;MQ=65.38;MQ0=10;MQRankSum=-2.620;QD=1.57;ReadPosRankSum=-0.811;VQSLOD=1.6345;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:23:47.97:0,48,552	1/1:11,0:10:14.40:98,14,0	0/1:11,0:9:2.05:8,0,2	0/0:13,0:8:0.72:0,1,32	0/0:16,0:15:16.81:0,17,141	1/1:15,0:14:7.77:30,8,0	1/1:26,0:26:2.77:10,3,0	1/1:8,10:17:26.95:223,27,0	0/0:14,0:14:32.97:0,33,393	0/0:21,0:21:37.06:0,37,305	0/0:11,0:11:19.07:0,19,128	1/1:15,0:15:5.17:21,5,0	0/0:9,0:9:17.87:0,18,177	0/0:17,0:17:32.21:0,32,285	0/0:9,0:9:17.87:0,18,148	0/1:11,0:11:3.73:4,0,6	0/1:28,0:27:6.05:9,0,6	1/1:16,0:16:1.92:13,2,0	0/1:13,0:13:21.98:22,0,138	0/0:14,0:14:15.15:0,15,158	0/0:48,0:46:40.38:0,40,410	0/1:13,0:13:0:0,0,0	./.	1/1:21,0:20:0.44:1,0,0	0/0:26,0:24:50.84:0,51,495	0/0:23,0:23:11.72:0,12,268	0/1:14,0:14:55.56:56,0,82	0/1:4,0:4:1.62:3,0,2
chr10	56233739	.	GCA	G	689.73	PASS	AB=1.000;AC=33;AF=0.688;AN=48;BaseQRankSum=3.364;DP=449;FS=0.785;HRun=0;HaplotypeScore=86.7205;InbreedingCoeff=0.5087;MQ=60.25;MQ0=17;MQRankSum=-2.523;QD=2.21;ReadPosRankSum=-0.892;VQSLOD=1.7087;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:23:42.05:0,42,471	1/1:8,0:7:2.59:14,3,0	0/1:8,0:6:0:0,0,0	./.	0/0:9,0:13:3.01:0,3,43	1/1:12,0:12:2.84:14,3,0	1/1:16,0:24:7.41:35,7,0	./.	0/1:18,0:18:0.76:1,0,303	0/0:19,0:19:11.11:0,11,109	1/1:12,0:12:2.99:24,3,0	1/1:8,0:11:3.73:16,4,0	0/0:9,0:9:12.01:0,12,136	0/0:17,0:17:24:0,24,246	0/0:12,0:12:11.99:0,12,100	1/1:3,0:7:11.35:56,11,0	1/1:25,0:26:5.31:26,5,0	1/1:13,0:13:5.68:28,6,0	1/1:13,0:13:2.53:13,3,0	1/1:11,4:15:3.48:33,3,0	1/1:54,0:50:40.70:297,41,0	./.	./.	1/1:13,0:16:0.44:1,0,0	0/1:26,0:24:8.85:9,0,306	1/1:15,6:22:17.74:147,18,0	1/1:10,5:14:3.01:33,3,0	1/1:5,0:5:11.95:97,12,0
chr10	56234960	.	AT	A	2992.63	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=10.792;DP=544;FS=1.739;HRun=10;HaplotypeScore=62.1835;InbreedingCoeff=0.9652;MQ=66.83;MQ0=5;MQRankSum=-1.039;QD=17.00;ReadPosRankSum=3.571;VQSLOD=4.2569;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,1:37:71.03:0,71,1032	0/0:9,0:9:24.06:0,24,265	0/0:32,0:11:3.40:0,3,128	0/0:14,0:7:10.86:0,11,59	0/0:16,0:16:36.10:0,36,398	1/1:0,15:15:44.99:391,45,0	1/1:5,18:22:41.99:364,42,0	0/0:29,0:29:78.16:0,78,831	0/0:8,0:8:21.06:0,21,232	0/0:24,0:23:53.51:0,54,572	0/0:17,0:17:42.11:0,42,457	1/1:1,17:18:35.99:312,36,0	0/0:10,0:10:21.06:0,21,232	0/0:12,0:12:24.06:0,24,265	0/0:20,0:20:60.07:0,60,627	1/1:5,15:20:38.98:338,39,0	1/1:2,25:27:65.97:573,66,0	1/1:4,15:19:34.90:322,35,0	0/0:22,0:23:53.97:0,54,569	0/0:16,0:16:42.10:0,42,456	0/0:12,0:12:33.09:0,33,365	1/1:1,13:14:35.99:312,36,0	1/1:4,11:15:17.99:156,18,0	1/1:5,20:25:52.15:437,52,0	0/0:21,0:21:51.14:0,51,564	0/0:31,0:30:78.21:0,78,861	0/0:19,0:19:51.04:0,51,522	0/0:18,0:18:54.13:0,54,588
chr10	56235141	.	GTT	G	6997.37	PASS	AB=0.600;AC=43;AF=0.768;AN=56;BaseQRankSum=7.070;DP=631;FS=4.910;HRun=12;HaplotypeScore=134.5094;InbreedingCoeff=0.8445;MQ=55.46;MQ0=26;MQRankSum=-2.807;QD=16.98;ReadPosRankSum=2.816;VQSLOD=3.3412;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:71.21:0,71,982	1/1:1,4:5:12.02:122,12,0	0/0:54,5:12:19.29:0,19,163	0/0:74,0:20:0.81:0,1,90	0/0:27,0:27:66.21:0,66,929	1/1:2,0:10:22.77:97,23,0	1/1:7,0:22:33.12:167,33,0	1/1:9,22:30:64.48:563,64,0	1/1:5,8:13:26.38:285,26,0	1/1:2,23:24:63.12:634,63,0	1/1:2,16:19:41.77:407,42,0	1/1:1,0:16:41.99:179,42,0	0/0:10,0:11:27.07:0,27,366	0/0:14,0:14:35.86:0,36,504	1/1:2,15:19:38.55:430,39,0	1/1:5,0:15:32.11:134,32,0	1/1:5,0:18:37.73:166,38,0	1/1:5,0:11:19.11:82,19,0	0/1:5,9:14:14.50:240,0,14	1/1:7,19:28:56.30:595,56,0	1/1:5,14:20:41.57:390,42,0	1/1:2,0:12:27.28:118,27,0	1/1:6,0:16:32.48:138,32,0	1/1:12,0:21:35.41:151,35,0	1/1:5,14:21:34.33:392,34,0	1/1:9,26:33:75.09:762,75,0	1/1:2,17:19:51.11:518,51,0	1/1:2,14:16:42.09:427,42,0
chr10	56235145	.	T	TG	892.75	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=9.819;DP=642;FS=0.388;HRun=0;HaplotypeScore=150.4886;InbreedingCoeff=0.8841;MQ=52.95;MQ0=26;MQRankSum=-10.848;QD=6.03;ReadPosRankSum=-1.010;VQSLOD=3.4265;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:30:87.18:0,87,1090	0/0:5,0:5:14.91:0,15,109	0/0:70,0:13:15.48:0,15,222	0/0:79,0:19:5.67:0,6,109	0/0:25,0:25:65.38:0,65,882	1/1:10,0:10:19.70:91,20,0	1/1:19,2:21:10.51:148,11,0	0/0:36,0:34:85.14:0,85,607	0/0:15,0:14:41.11:0,41,290	0/0:25,0:24:65.43:0,65,452	0/0:19,0:19:53.57:0,54,380	1/1:17,0:17:10.70:71,11,0	0/0:11,0:11:27.39:0,27,348	0/0:14,0:14:42.10:0,42,526	0/0:18,0:18:50.59:0,51,354	1/1:14,0:14:29.11:168,29,0	1/1:16,2:18:26.04:138,26,0	1/1:11,2:12:19.02:71,19,0	0/0:15,0:14:38.49:0,38,270	0/0:26,0:26:77.43:0,77,571	0/0:20,0:19:41.55:0,42,280	1/1:12,0:12:27.61:150,28,0	0/1:18,0:17:9.88:69,0,10	1/1:20,5:25:20.07:191,20,0	0/0:19,0:19:53.67:0,54,396	0/0:32,0:30:86.28:0,86,614	0/0:19,0:19:53.49:0,53,369	0/0:14,0:14:41.65:0,42,288
chr10	56235149	.	T	TG	529.26	PASS	AB=1.000;AC=16;AF=0.286;AN=56;BaseQRankSum=13.259;DP=642;FS=6.495;HRun=0;HaplotypeScore=151.7372;InbreedingCoeff=0.8411;MQ=49.75;MQ0=25;MQRankSum=-12.505;QD=3.68;ReadPosRankSum=-0.429;VQSLOD=3.0376;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:81.13:0,81,1033	0/0:4,0:4:11.77:0,12,70	0/0:75,0:12:23.67:0,24,209	0/0:80,0:18:3.64:0,4,129	0/0:25,0:25:65.36:0,65,881	1/1:9,0:9:14.47:41,14,0	1/1:21,0:21:25.09:149,25,0	0/0:36,0:34:88.53:0,89,616	0/0:14,0:13:38.36:0,38,243	0/0:25,0:24:64.46:0,64,383	0/0:18,0:18:52.92:0,53,321	1/1:17,0:17:27.79:88,28,0	0/0:10,0:10:23.67:0,24,320	0/0:13,0:13:39.10:0,39,499	0/0:19,0:19:50.04:0,50,308	1/1:13,0:13:17.61:53,18,0	1/1:17,0:17:15.49:63,15,0	1/1:13,0:12:23.53:113,24,0	0/0:16,0:15:40.86:0,41,262	0/0:28,0:28:76.61:0,77,504	0/0:21,0:20:44.11:0,44,268	0/1:11,0:11:0.94:23,0,1	0/1:19,0:18:7.83:43,0,8	1/1:20,4:24:34.18:154,34,0	0/0:17,0:17:47.16:0,47,294	0/0:31,0:30:82.45:0,82,515	0/0:22,0:22:61.95:0,62,398	0/0:14,0:14:41.17:0,41,246
chr10	56235163	.	TG	T	4222.69	PASS	AB=0.992;AC=26;AF=0.464;AN=56;BaseQRankSum=9.655;DP=649;FS=8.700;HRun=4;HaplotypeScore=137.6390;InbreedingCoeff=0.4649;MQ=50.38;MQ0=27;MQRankSum=-11.066;QD=13.49;ReadPosRankSum=-1.518;VQSLOD=2.8054;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:72.24:0,72,1062	0/1:4,0:4:15.61:16,0,19	0/0:85,0:15:18.90:0,19,198	0/0:79,1:22:10.62:0,11,200	0/0:20,0:20:60.16:0,60,760	1/1:2,6:10:26.90:259,27,0	1/1:1,17:20:51.01:554,51,0	0/1:28,1:28:3.81:4,0,101	0/0:14,0:13:27.35:0,27,133	0/1:26,0:25:46.29:79,0,46	0/0:20,0:20:53.10:0,53,256	1/1:0,17:17:48.08:551,48,0	0/0:10,0:10:29.97:0,30,363	0/0:14,0:14:42.05:0,42,486	0/0:20,0:20:21.15:0,21,131	1/1:0,11:12:33.05:374,33,0	1/1:1,19:20:39.40:575,39,0	1/1:5,8:13:35.99:385,36,0	0/1:18,0:16:35.88:51,0,36	0/0:27,0:27:5.44:0,5,179	0/1:22,0:21:2.53:3,0,73	1/1:4,8:12:24.07:285,24,0	1/1:0,13:15:38.94:411,39,0	1/1:2,21:23:55.76:612,56,0	0/1:16,0:16:29.14:29,0,62	0/1:30,0:29:30.94:31,0,108	0/1:24,0:24:5.71:6,0,177	0/0:12,0:12:30.81:0,31,117
chr10	56236708	.	A	AT	8737.40	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=13.840;DP=477;FS=0.354;HRun=0;HaplotypeScore=66.6976;InbreedingCoeff=0.9799;MQ=75.68;MQ0=0;MQRankSum=1.105;QD=40.64;ReadPosRankSum=0.990;VQSLOD=5.3925;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:81.23:0,81,1082	1/1:0,3:3:9.03:135,9,0	0/0:7,0:6:15:0,15,186	0/0:17,0:17:45.18:0,45,439	0/0:16,0:16:42.11:0,42,550	0/0:21,0:21:60.19:0,60,819	0/0:21,0:21:54.18:0,54,753	1/1:0,20:20:60.19:875,60,0	1/1:0,14:14:39.13:589,39,0	1/1:0,19:19:54.17:783,54,0	1/1:1,11:12:30.08:439,30,0	0/0:11,0:11:33.10:0,33,444	0/0:6,0:6:18.06:0,18,252	0/0:12,0:12:36.12:0,36,503	1/1:0,23:23:60.20:895,60,0	0/0:13,0:13:39.13:0,39,544	0/0:33,0:33:96.32:0,96,1340	0/0:21,0:21:60.20:0,60,834	1/1:0,10:10:30.08:413,30,0	1/1:0,15:15:42.14:631,42,0	1/1:1,46:46:99:1823,123,0	0/0:13,0:13:30.10:0,30,420	0/0:8,0:8:21.07:0,21,291	0/0:32,0:32:96.32:0,96,1342	1/1:0,16:16:45.15:671,45,0	1/1:1,16:17:9.26:679,9,0	1/1:0,9:9:24.08:360,24,0	1/1:0,10:10:30.10:445,30,0
chr10	56236807	.	TAC	T	197.67	PASS	AB=0.971;AC=15;AF=0.300;AN=50;BaseQRankSum=1.863;DP=538;FS=0.789;HRun=0;HaplotypeScore=77.3517;InbreedingCoeff=-0.2043;MQ=52.33;MQ0=16;MQRankSum=0.181;QD=0.73;ReadPosRankSum=-0.861;VQSLOD=1.5509;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:37,0:38:9.03:9,0,284	1/1:6,0:5:0.47:1,0,0	./.	./.	0/1:8,1:9:23.40:23,0,59	0/0:11,0:12:1.42:0,1,109	0/1:32,0:28:5.97:6,0,209	0/0:25,0:25:3.45:0,3,22	0/0:17,0:17:10.25:0,10,154	0/0:11,0:9:3.17:0,3,7	0/0:17,0:16:16.30:0,16,214	0/1:21,0:21:28.47:28,0,57	0/1:18,0:17:9.75:10,0,202	0/0:19,0:19:14.79:0,15,189	0/0:19,0:18:17.25:0,17,188	0/0:22,0:22:2.35:0,2,209	0/1:28,1:29:46.58:47,0,283	0/0:22,0:22:10.26:0,10,225	./.	0/1:8,0:7:28.80:73,0,29	0/1:44,1:43:20:20,0,139	0/1:21,0:19:18.62:19,0,135	0/0:18,0:18:8.79:0,9,133	0/1:29,1:29:5.66:6,0,196	0/0:13,0:13:6.01:0,6,71	0/0:23,0:22:31.24:0,31,304	0/1:11,1:10:44.66:45,0,82	1/1:1,1:2:5.85:46,6,0
chr10	56237608	.	GGA	G	9528.61	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=15.823;DP=763;FS=19.228;HRun=0;HaplotypeScore=91.9942;InbreedingCoeff=0.9993;MQ=65.02;MQ0=1;MQRankSum=-1.776;QD=38.89;ReadPosRankSum=3.108;VQSLOD=5.2040;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,144,2609	0/0:16,0:16:45.15:0,45,825	0/0:28,0:26:63.22:0,63,1144	0/0:36,0:34:96.28:0,96,1634	0/0:18,0:18:51.16:0,51,903	1/1:1,18:19:48.16:688,48,0	1/1:3,35:38:99:1492,105,0	0/0:19,0:19:54.19:0,54,991	0/0:27,0:27:78.24:0,78,1368	0/0:31,0:31:81.28:0,81,1474	0/0:13,0:13:33.11:0,33,595	1/1:1,38:39:99:1505,105,0	0/0:27,0:27:81.28:0,81,1477	0/0:29,0:29:87.30:0,87,1584	0/0:41,0:41:99:0,123,2250	1/1:0,23:23:66.22:946,66,0	1/1:2,33:35:93.31:1332,93,0	1/1:1,17:18:42.14:602,42,0	0/0:26,0:26:72.23:0,72,1280	0/0:21,0:21:63.22:0,63,1145	0/0:53,0:53:99:0,160,2896	1/1:0,18:18:51.17:730,51,0	1/1:3,20:23:63.21:902,63,0	1/1:0,32:32:93.31:1332,93,0	0/0:22,0:22:54.17:0,54,950	0/0:34,0:34:99:0,102,1832	0/0:18,0:18:51.17:0,51,935	0/0:7,0:7:21.07:0,21,380
chr10	56238953	.	GCC	G	4931.48	PASS	AB=0.895;AC=23;AF=0.411;AN=56;BaseQRankSum=-2.585;DP=502;FS=1.812;HRun=11;HaplotypeScore=75.8572;InbreedingCoeff=0.9083;MQ=76.52;MQ0=0;MQRankSum=-1.622;QD=21.44;ReadPosRankSum=4.013;VQSLOD=4.5008;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:38:76.78:0,77,1014	0/0:4,0:5:8.51:0,9,83	0/0:11,0:10:12.81:0,13,243	0/0:15,0:16:8.62:0,9,242	0/0:15,0:17:39.79:0,40,467	0/0:3,0:10:15.02:0,15,141	0/0:10,0:24:47.68:0,48,521	0/1:15,1:17:5.36:5,0,303	1/1:2,14:16:36.07:383,36,0	1/1:1,20:21:60.12:632,60,0	1/1:3,12:15:30.07:319,30,0	0/0:9,0:18:27.05:0,27,306	0/0:14,0:15:38.59:0,39,514	0/0:18,0:19:33.10:0,33,475	1/1:1,18:19:45.11:479,45,0	0/0:6,0:12:21.94:0,22,269	0/0:10,0:22:42.09:0,42,502	0/0:11,0:22:36.07:0,36,427	1/1:9,17:26:51.06:536,51,0	1/1:3,14:17:36.07:383,36,0	1/1:3,18:22:51.11:543,51,0	0/0:7,0:12:18.01:0,18,184	0/0:8,0:14:8.70:0,9,120	0/0:16,0:17:42.13:0,42,623	1/1:5,14:19:39.05:415,39,0	1/1:4,17:21:51.11:543,51,0	1/1:2,18:21:27.02:343,27,0	1/1:4,12:16:33.06:351,33,0
chr10	56243479	.	T	TG	7102.84	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-12.336;DP=652;FS=24.406;HRun=1;HaplotypeScore=111.9892;InbreedingCoeff=0.9817;MQ=68.78;MQ0=2;MQRankSum=2.849;QD=25.73;ReadPosRankSum=3.279;VQSLOD=3.4618;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:57.75:0,58,730	0/0:10,0:10:24.88:0,25,238	0/0:25,0:13:31.01:0,31,269	0/0:19,0:15:35.90:0,36,333	0/0:28,0:28:65.12:0,65,816	0/0:20,0:20:55.59:0,56,438	0/0:25,0:25:62.65:0,63,503	0/0:35,0:35:82.49:0,82,941	1/1:5,23:28:51.17:737,51,0	1/1:7,32:39:99:1243,101,0	1/1:4,21:25:49.43:596,49,0	0/0:26,0:26:74.81:0,75,640	0/0:17,0:17:45.09:0,45,503	0/0:17,0:17:43.72:0,44,437	1/1:3,18:21:24.52:352,25,0	0/0:14,0:14:41.94:0,42,366	0/0:26,0:25:68.84:0,69,588	0/0:17,0:16:9.93:0,10,213	1/1:8,16:23:42.80:653,43,0	1/1:5,16:21:43.52:540,44,0	1/1:5,18:23:35.55:481,36,0	0/0:25,0:24:65.62:0,66,531	0/0:18,0:17:43.05:0,43,342	0/0:24,0:24:64.75:0,65,561	1/1:3,18:21:48.05:668,48,0	1/1:5,24:29:64.09:901,64,0	1/1:2,20:22:42.06:582,42,0	1/1:7,16:23:7.75:349,8,0
chr10	56243480	.	G	GT	2595.90	PASS	AB=0.969;AC=24;AF=0.429;AN=56;BaseQRankSum=2.991;DP=661;FS=19.189;HRun=13;HaplotypeScore=124.8735;InbreedingCoeff=0.0682;MQ=68.17;MQ0=5;MQRankSum=3.995;QD=5.58;ReadPosRankSum=3.952;VQSLOD=0.7283;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,6:34:28.31:0,28,333	0/0:9,0:10:13.86:0,14,87	0/0:25,1:13:8.56:0,9,46	0/1:18,0:15:2.61:3,0,38	0/0:27,2:31:3.46:0,3,353	0/0:20,0:20:0.52:0,1,25	0/0:25,0:25:9.66:0,10,53	0/1:27,4:35:10.56:11,0,319	1/1:27,0:28:50.28:332,50,0	0/1:39,1:40:7.65:395,0,8	1/1:23,0:23:0.96:211,1,0	0/1:27,0:27:3.04:3,0,38	0/0:17,0:17:31.41:0,31,207	0/0:17,0:17:6.35:0,6,122	0/1:23,0:23:11.40:136,0,11	0/0:14,0:14:1.84:0,2,27	0/1:26,0:24:0.79:1,0,31	0/1:17,0:16:3.22:4,0,3	0/1:22,1:23:14.19:206,0,14	0/1:19,0:21:12.63:190,0,13	0/1:20,0:20:2.76:164,0,3	0/1:23,0:22:1.11:1,0,16	0/1:18,0:17:4.29:23,0,4	0/1:24,0:24:6.10:6,0,40	1/1:21,1:22:50.23:333,50,0	1/1:29,0:29:21.19:313,21,0	1/1:21,0:22:34.85:273,35,0	0/1:21,0:22:43.52:153,0,44
chr10	56243492	.	TTG	T	3086.49	PASS	AB=1.000;AC=20;AF=0.357;AN=56;BaseQRankSum=8.389;DP=635;FS=42.255;HRun=0;HaplotypeScore=121.4167;InbreedingCoeff=0.8468;MQ=57.12;MQ0=11;MQRankSum=-4.610;QD=13.25;ReadPosRankSum=1.245;VQSLOD=1.5718;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:75.04:0,75,915	0/0:6,0:6:17.68:0,18,183	0/1:32,0:6:12.59:13,0,56	0/1:24,0:13:36.68:38,0,37	0/0:34,0:34:77.72:0,78,975	1/1:18,0:18:44.23:363,44,0	1/1:24,1:25:55.61:402,56,0	0/0:31,0:31:65.34:0,65,819	0/0:27,0:27:70.43:0,70,688	0/0:36,0:36:99:0,102,1042	0/0:19,0:19:29:0,29,381	1/1:22,0:22:54.13:392,54,0	0/0:15,0:15:40.80:0,41,469	0/0:16,0:16:28.75:0,29,433	0/0:19,0:19:44.55:0,45,434	1/1:14,0:14:35.15:292,35,0	1/1:22,2:22:56.32:479,56,0	1/1:17,0:16:32.07:258,32,0	0/0:25,0:23:58.69:0,59,609	0/0:24,0:24:61.16:0,61,623	0/0:21,0:20:47.35:0,47,464	1/1:21,1:21:55.45:463,55,0	1/1:16,0:15:33.91:259,34,0	1/1:19,0:19:46.75:343,47,0	0/0:19,1:20:42.78:0,43,490	0/0:31,0:31:45.37:0,45,700	0/0:24,0:24:50.48:0,50,471	0/0:19,0:19:48.56:0,49,537
chr10	56243493	.	TG	T	4395.68	PASS	AB=0.944;AC=20;AF=0.357;AN=56;BaseQRankSum=7.596;DP=630;FS=46.096;HRun=1;HaplotypeScore=105.8682;InbreedingCoeff=0.8431;MQ=57.03;MQ0=11;MQRankSum=-1.359;QD=19.03;ReadPosRankSum=1.169;VQSLOD=2.1666;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:74.71:0,75,708	0/0:6,0:6:16.24:0,16,145	0/1:32,0:6:19.58:20,0,46	0/1:21,3:13:32.31:80,0,32	0/0:35,0:35:72.74:0,73,758	1/1:9,9:18:44.87:496,45,0	1/1:14,11:25:57.16:566,57,0	0/0:31,0:31:56.99:0,57,601	0/0:28,0:28:72.46:0,72,510	0/0:36,0:36:99:0,101,757	0/0:18,0:18:27.75:0,28,260	1/1:12,10:22:58.20:575,58,0	0/0:14,0:14:37.85:0,38,359	0/0:16,0:16:24.84:0,25,312	0/0:19,0:19:39.57:0,40,308	1/1:8,4:12:35.56:372,36,0	1/1:20,4:22:55.78:580,56,0	1/1:13,4:16:32.28:314,32,0	0/0:24,0:22:58.15:0,58,446	0/0:24,0:24:60.59:0,61,441	0/0:21,0:20:40.90:0,41,335	1/1:15,7:21:56.34:566,56,0	1/1:7,9:15:34.83:368,35,0	1/1:17,2:19:47.34:460,47,0	0/0:20,0:20:42.33:0,42,338	0/0:29,0:29:58.25:0,58,521	0/0:24,0:24:48.06:0,48,350	0/0:19,0:19:39.94:0,40,394
chr10	56243511	.	T	TC	3505.03	PASS	AB=0.778;AC=19;AF=0.339;AN=56;BaseQRankSum=5.514;DP=544;FS=5.095;HRun=1;HaplotypeScore=83.8945;InbreedingCoeff=0.8556;MQ=53.84;MQ0=15;MQRankSum=-2.350;QD=18.84;ReadPosRankSum=-0.189;VQSLOD=3.6795;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:78.12:0,78,919	0/0:6,0:6:12.01:0,12,138	1/1:21,0:3:1.14:5,1,0	0/0:15,0:6:1.37:0,1,18	0/0:30,0:30:87.02:0,87,1031	1/1:10,8:18:39.06:426,39,0	1/1:6,16:22:41.17:404,41,0	0/0:19,0:18:44.93:0,45,473	0/0:24,0:24:63.16:0,63,757	0/0:26,0:26:71.87:0,72,786	0/0:18,0:18:39.08:0,39,441	1/1:9,9:18:35.81:349,36,0	0/0:12,0:11:24.08:0,24,309	0/0:17,0:17:36.08:0,36,404	0/0:22,0:21:51.10:0,51,571	1/1:9,4:13:33.01:378,33,0	1/1:15,7:20:36.69:625,37,0	0/1:10,4:13:11.71:273,0,12	0/0:14,0:14:39.06:0,39,459	0/0:21,0:20:54.08:0,54,630	0/0:26,0:23:50.91:0,51,567	1/1:3,13:15:20.90:233,21,0	1/1:4,16:20:23.89:268,24,0	1/1:19,3:22:50.97:543,51,0	0/0:17,0:17:39.11:0,39,470	0/0:25,0:25:69.10:0,69,826	0/0:17,0:17:45.15:0,45,580	0/0:10,0:10:30.10:0,30,384
chr10	56244084	.	AC	A	4374.56	PASS	AB=0.889;AC=45;AF=0.804;AN=56;BaseQRankSum=1.019;DP=304;FS=4.885;HRun=9;HaplotypeScore=48.0998;InbreedingCoeff=0.8099;MQ=91.62;MQ0=1;MQRankSum=-1.674;QD=20.07;ReadPosRankSum=2.015;VQSLOD=5.2119;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:36.11:0,36,415	1/1:3,0:3:2.99:27,3,0	0/0:27,0:17:16.04:0,16,181	0/0:28,0:22:29.08:0,29,246	0/0:7,1:8:17.75:0,18,207	1/1:3,9:13:24.01:220,24,0	1/1:1,4:5:12.01:110,12,0	1/1:3,11:14:33.01:302,33,0	1/1:1,10:11:29.46:274,29,0	1/1:1,11:12:30.01:274,30,0	1/1:3,10:13:27.01:246,27,0	1/1:5,8:14:29.05:252,29,0	0/0:8,0:8:18.05:0,18,205	0/1:7,1:8:6.40:6,0,187	1/1:1,10:11:30.02:275,30,0	1/1:1,7:8:21.01:192,21,0	1/1:1,11:12:27.01:247,27,0	1/1:1,7:8:18.01:165,18,0	1/1:1,5:6:15.01:137,15,0	1/1:1,3:4:2.74:27,3,0	1/1:4,16:20:20.03:335,20,0	1/1:1,9:10:18.01:165,18,0	1/1:0,6:6:18.01:165,18,0	1/1:1,5:6:15.01:137,15,0	1/1:2,10:12:27.01:247,27,0	1/1:2,5:7:18.01:164,18,0	1/1:2,8:10:30.01:271,30,0	1/1:0,5:5:15.01:137,15,0
chr10	56245786	.	TTTCC	T	4638.06	PASS	AB=0.737;AC=17;AF=0.304;AN=56;BaseQRankSum=13.154;DP=751;FS=2.479;HRun=0;HaplotypeScore=118.2145;InbreedingCoeff=0.7006;MQ=63.84;MQ0=3;MQRankSum=-1.082;QD=22.19;ReadPosRankSum=1.614;VQSLOD=4.9187;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,1:34:13.85:0,14,1243	0/1:11,2:13:68.67:69,0,459	0/0:24,0:19:15.05:0,15,333	0/0:12,0:11:3.01:0,3,55	0/0:27,0:27:48.15:0,48,1060	0/1:14,16:30:32.82:535,0,33	0/1:15,12:27:10.37:356,0,10	0/0:36,0:36:45.10:0,45,885	0/0:40,0:40:75.23:0,75,1643	0/0:24,0:24:39.61:0,40,900	0/0:32,0:32:54.17:0,54,1204	1/1:4,11:15:21.04:335,21,0	0/0:34,0:34:78.27:0,78,1755	0/0:38,1:39:12.82:0,13,2038	0/0:34,0:34:60.19:0,60,1363	1/1:5,22:27:45.15:718,45,0	1/1:6,14:20:39.13:602,39,0	1/1:9,14:23:14.62:500,15,0	0/0:24,0:21:18.06:0,18,426	0/0:35,0:34:66.21:0,66,1519	0/0:26,0:26:60.21:0,60,1395	1/1:5,16:21:45.15:716,45,0	1/1:8,10:18:30.10:478,30,0	1/1:3,11:14:21.07:329,21,0	0/0:26,0:26:54.19:0,54,1246	0/0:35,0:35:63.22:0,63,1481	0/0:39,0:39:66.23:0,66,1516	0/0:20,1:21:6.30:0,6,1171
chr10	56246194	.	A	AAAACAGC	12076.28	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-7.578;DP=769;FS=3.410;HRun=0;HaplotypeScore=167.8468;InbreedingCoeff=0.9957;MQ=76.49;MQ0=0;MQRankSum=-15.593;QD=52.73;ReadPosRankSum=-4.732;VQSLOD=3.3824;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,102,2383	0/0:20,0:20:42.13:0,42,937	0/0:26,0:26:32.52:0,33,605	0/0:23,0:23:35.47:0,35,713	0/0:29,0:29:57.18:0,57,1224	1/1:11,16:27:57.20:2027,57,0	1/1:15,9:25:39.09:1275,39,0	0/0:23,0:22:36.12:0,36,763	0/0:30,0:30:72.25:0,72,1677	0/0:46,0:46:90.31:0,90,2085	0/0:22,0:22:39.13:0,39,912	1/1:17,16:35:54.18:1934,54,0	0/0:25,0:25:57.20:0,57,1284	0/0:15,0:15:42.13:0,42,936	0/0:29,0:29:63.22:0,63,1473	1/1:12,24:38:63.22:2294,63,0	1/1:13,10:24:24.08:838,24,0	1/1:4,6:11:15.05:560,15,0	0/0:20,0:20:39.11:0,39,818	0/0:32,0:32:69.22:0,69,1505	0/0:40,0:40:93.31:0,93,2122	1/1:6,15:24:42.05:1247,42,0	1/1:10,6:16:21.07:746,21,0	1/1:18,11:29:33.11:1157,33,0	0/0:22,0:22:45.15:0,45,1052	0/0:35,0:35:78.25:0,78,1716	0/0:46,0:45:99:0,99,2251	0/0:9,0:9:21.07:0,21,491
chr10	56246537	.	G	GC	6182.13	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-15.057;DP=605;FS=1.955;HRun=6;HaplotypeScore=54.5521;InbreedingCoeff=0.9993;MQ=82.35;MQ0=0;MQRankSum=-1.231;QD=32.20;ReadPosRankSum=2.644;VQSLOD=5.2836;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,120,1224	0/0:11,0:11:21.05:0,21,214	0/0:21,0:21:56.18:0,56,560	0/0:17,0:16:38.67:0,39,388	0/0:31,0:31:87.19:0,87,887	1/1:0,24:24:66.21:830,66,0	1/1:1,21:22:54.17:678,54,0	0/0:23,0:23:57.12:0,57,576	0/0:14,0:14:36.08:0,36,367	0/0:25,0:25:69.15:0,69,704	0/0:22,0:22:63.14:0,63,643	1/1:2,15:17:39.12:490,39,0	0/0:16,0:16:45.10:0,45,459	0/0:18,0:18:54.12:0,54,551	0/0:20,0:20:60.12:0,60,606	1/1:1,19:20:54.17:674,54,0	1/1:0,26:26:66.21:830,66,0	1/1:1,17:18:42.13:528,42,0	0/0:19,0:19:54.10:0,54,540	0/0:28,0:28:81.18:0,81,826	0/0:31,0:31:87.19:0,87,888	1/1:1,14:15:39.12:491,39,0	1/1:1,25:26:75.24:943,75,0	1/1:2,22:24:57.18:717,57,0	0/0:19,0:19:57.11:0,57,573	0/0:22,0:22:60.13:0,60,612	0/0:22,0:22:60.13:0,60,612	0/0:11,0:11:33.08:0,33,337
chr10	56248465	.	AT	A	1059.04	PASS	AB=0.660;AC=19;AF=0.352;AN=54;BaseQRankSum=-0.489;DP=430;FS=3.336;HRun=16;HaplotypeScore=51.2149;InbreedingCoeff=0.5453;MQ=58.65;MQ0=7;MQRankSum=1.700;QD=5.60;ReadPosRankSum=1.859;VQSLOD=2.4231;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:17,3:21:23.66:0,24,171	0/1:6,2:8:12.05:12,0,127	0/0:16,0:4:2.51:0,3,23	./.	0/0:17,0:20:26.64:0,27,197	0/0:4,0:17:20.03:0,20,108	0/0:5,0:19:40.42:0,40,234	0/0:23,1:28:12.54:0,13,303	1/1:7,8:15:14.58:90,15,0	1/1:7,10:17:12.16:144,12,0	0/1:4,8:11:0.74:92,0,1	0/0:0,0:3:5.48:0,5,28	0/0:13,0:13:23.96:0,24,197	0/0:13,1:14:11.96:0,12,203	1/1:2,15:18:0.41:107,0,0	0/0:2,0:7:5.68:0,6,28	0/0:10,0:23:34.60:0,35,202	0/0:5,0:16:20.01:0,20,105	0/1:10,9:16:46.22:91,0,46	1/1:6,12:19:21.58:130,22,0	1/1:4,7:11:11.71:72,12,0	0/0:2,0:6:8.52:0,9,43	0/0:11,0:11:9.35:0,9,63	0/0:7,0:15:17.21:0,17,91	0/1:7,8:15:5.64:76,0,6	1/1:6,13:19:12.87:183,13,0	1/1:8,14:24:29.96:172,30,0	0/1:3,9:12:2.56:72,0,3
chr10	56251905	.	TTC	T	1002.61	PASS	AB=0.882;AC=13;AF=0.250;AN=52;BaseQRankSum=-0.780;DP=921;FS=11.564;HRun=0;HaplotypeScore=47.1088;InbreedingCoeff=0.0067;MQ=22.48;MQ0=305;MQRankSum=-1.456;QD=2.67;ReadPosRankSum=0.699;VQSLOD=-0.4964;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:63,0:23:24.08:0,24,310	0/0:14,0:4:2.99:0,3,23	./.	./.	0/0:43,0:26:32.93:0,33,378	0/1:17,0:7:8.11:8,0,16	0/0:31,0:13:17.90:0,18,130	0/0:59,0:19:47.64:0,48,466	1/1:23,5:8:15.05:204,15,0	0/0:33,0:11:10.19:0,10,293	1/1:12,2:4:6.02:82,6,0	0/0:24,0:13:14.67:0,15,98	0/0:27,0:18:26.80:0,27,330	0/0:25,0:16:17.70:0,18,184	0/1:18,1:7:31.74:32,0,68	0/0:11,0:6:11.92:0,12,85	0/0:81,0:16:26.96:0,27,262	0/0:48,0:18:17.07:0,17,224	0/1:34,2:9:54.60:55,0,223	0/1:23,8:18:26.73:107,0,27	0/1:40,9:19:48.39:64,0,48	0/0:27,0:12:2.98:0,3,22	0/0:16,0:8:5.97:0,6,43	0/1:58,0:8:14.46:14,0,62	0/1:16,8:17:11.67:299,0,12	0/0:39,0:16:36.11:0,36,457	0/1:25,12:18:22.08:73,0,22	0/1:55,7:28:89.34:218,0,89
chr10	56251992	.	TC	T	1749.54	PASS	AB=0.851;AC=12;AF=0.231;AN=52;BaseQRankSum=11.026;DP=806;FS=6.933;HRun=1;HaplotypeScore=108.5566;InbreedingCoeff=0.1151;MQ=24.51;MQ0=326;MQRankSum=-6.515;QD=5.47;ReadPosRankSum=0.001;VQSLOD=0.0810;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:10:18.06:0,18,255	0/0:10,0:5:15.05:0,15,207	./.	./.	0/0:28,0:12:27.09:0,27,367	0/1:13,5:9:5.75:219,0,6	1/1:26,0:2:2.98:21,3,0	0/0:43,0:12:29.63:0,30,369	0/0:29,0:20:42.13:0,42,587	0/0:32,0:13:33.11:0,33,492	0/0:25,0:17:42.09:0,42,572	0/1:15,10:15:45.76:399,0,46	0/0:20,0:10:29.90:0,30,371	0/0:20,0:10:27.09:0,27,369	0/0:31,0:26:48.15:0,48,673	0/1:7,6:10:55.10:261,0,55	0/1:45,3:12:53.37:198,0,53	0/1:40,1:13:86.72:87,0,173	0/0:35,0:14:37.32:0,37,510	0/0:24,0:14:33.11:0,33,471	0/1:36,1:10:39.26:39,0,166	1/1:25,6:9:26.96:309,27,0	0/1:14,8:12:12.42:323,0,12	0/1:59,0:11:45.26:46,0,45	0/0:38,0:27:45.17:0,45,785	0/0:48,0:28:72.24:0,72,1072	0/0:41,0:26:61.76:0,62,867	0/0:28,0:4:12.04:0,12,175
chr10	56251993	.	CT	C	1338.42	PASS	AB=0.919;AC=12;AF=0.231;AN=52;BaseQRankSum=10.912;DP=815;FS=7.936;HRun=2;HaplotypeScore=118.4343;InbreedingCoeff=0.0812;MQ=24.79;MQ0=322;MQRankSum=-4.193;QD=4.11;ReadPosRankSum=0.467;VQSLOD=0.0788;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:10:21.03:0,21,265	0/0:10,0:5:14.99:0,15,132	./.	./.	0/0:28,0:12:27.05:0,27,347	0/1:16,3:10:9.08:171,0,9	1/1:24,1:2:3.01:38,3,0	0/0:43,0:13:29.76:0,30,343	0/0:28,0:20:42.13:0,42,554	0/0:32,0:13:33.10:0,33,450	0/0:25,0:17:41.50:0,41,532	0/1:28,1:19:57.92:207,0,58	0/0:20,0:10:26.88:0,27,341	0/0:20,0:10:27.02:0,27,329	0/0:32,0:27:54.12:0,54,703	0/1:13,2:12:49.42:184,0,49	0/1:42,6:12:57.16:220,0,57	0/1:35,4:12:99:148,0,140	0/0:36,0:15:44.72:0,45,517	0/0:25,0:15:32.97:0,33,429	0/1:37,0:10:28.02:28,0,148	1/1:28,3:10:11.60:217,12,0	0/1:23,1:14:41.30:171,0,41	0/1:50,8:11:27.51:105,0,28	0/0:38,0:27:55.63:0,56,760	0/0:48,0:28:72.21:0,72,967	0/0:41,0:26:64.74:0,65,829	0/0:28,0:4:12.04:0,12,167
chr10	56252015	.	TC	T	1767.13	PASS	AB=0.738;AC=10;AF=0.179;AN=56;BaseQRankSum=11.303;DP=606;FS=1.668;HRun=2;HaplotypeScore=116.5771;InbreedingCoeff=0.1870;MQ=33.35;MQ0=127;MQRankSum=-8.096;QD=9.98;ReadPosRankSum=2.281;VQSLOD=1.8065;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:14:33.11:0,33,470	0/0:8,0:8:21.07:0,21,305	0/0:11,0:4:12.04:0,12,179	0/0:14,0:7:14.93:0,15,201	0/0:20,0:13:24.54:0,25,360	1/1:8,12:15:1.78:331,2,0	0/1:12,3:6:6.27:75,0,6	0/0:26,0:21:57.12:0,57,707	0/0:23,0:21:45:0,45,593	0/0:22,0:13:30.98:0,31,408	0/0:18,0:15:39.10:0,39,553	0/1:8,20:24:23.15:525,0,23	0/0:16,0:10:30.10:0,30,417	0/0:14,0:10:21.07:0,21,304	0/0:27,0:23:42.14:0,42,616	0/1:11,11:15:50.63:286,0,51	0/1:19,4:10:40.93:114,0,41	0/1:23,4:12:97.79:98,0,124	0/0:23,0:11:29.58:0,30,383	0/0:19,0:19:47.86:0,48,598	0/0:26,0:11:22.89:0,23,319	1/1:14,7:10:7.86:197,8,0	0/1:9,11:14:11.73:284,0,12	0/0:35,0:8:2.72:0,3,34	0/0:28,0:21:40.69:0,41,576	0/0:29,0:17:34.88:0,35,447	0/0:24,0:20:45.10:0,45,636	0/0:17,0:5:12.04:0,12,174
chr10	56254353	.	AAAAAC	A	5339.24	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=9.370;DP=613;FS=10.675;HRun=0;HaplotypeScore=113.9012;InbreedingCoeff=0.9447;MQ=60.88;MQ0=3;MQRankSum=-0.752;QD=23.32;ReadPosRankSum=1.009;VQSLOD=3.8422;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:48.16:0,48,1241	1/1:4,5:9:9.03:163,9,0	0/0:28,0:16:10.27:0,10,176	0/0:45,0:13:3.01:0,3,76	0/0:26,0:26:48.16:0,48,1305	1/1:4,15:19:36.12:652,36,0	1/1:11,3:14:15.03:238,15,0	1/1:24,5:29:13.57:201,14,0	0/0:16,0:16:30.10:0,30,842	0/0:29,0:29:63.22:0,63,1687	0/0:21,0:21:42.13:0,42,961	1/1:14,11:25:39.08:643,39,0	0/0:16,0:16:29.93:0,30,736	0/0:21,0:21:27.09:0,27,712	0/0:19,0:19:24.08:0,24,640	1/1:11,3:14:21.07:371,21,0	1/1:17,13:29:42.14:739,42,0	1/1:12,9:20:39.11:666,39,0	0/0:19,0:19:12.04:0,12,324	0/0:27,0:27:56.56:0,57,1436	0/0:12,0:12:27.09:0,27,738	1/1:14,11:25:36.10:648,36,0	1/1:8,8:16:15.05:272,15,0	1/1:12,14:27:42.14:748,42,0	0/0:20,0:20:42.14:0,42,1060	0/0:27,0:27:33.11:0,33,869	0/0:21,0:21:45.12:0,45,1156	0/0:7,0:7:15.05:0,15,414
chr10	56254416	.	TGAGAGAGAGAGAGA	T	4422.33	PASS	AB=0.824;AC=23;AF=0.426;AN=54;BaseQRankSum=5.416;DP=538;FS=38.810;HRun=0;HaplotypeScore=227.6347;InbreedingCoeff=0.4746;MQ=65.54;MQ0=11;MQRankSum=-6.827;QD=19.65;ReadPosRankSum=2.492;VQSLOD=2.7571;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:20:27.09:0,27,1455	0/1:6,1:8:15.94:206,0,16	./.	0/0:50,0:26:0.88:0,1,2	0/0:31,0:31:54.19:0,54,2627	0/1:14,0:18:28.77:29,0,254	0/0:16,0:20:6.30:0,6,260	0/0:21,0:20:3.01:0,3,70	1/1:2,2:6:12.04:431,12,0	1/1:15,0:17:9.01:178,9,0	1/1:12,5:16:3.44:118,3,0	0/0:13,0:14:21:0,21,302	0/0:17,0:17:30.10:0,30,1545	0/0:9,0:9:15.05:0,15,762	1/1:10,4:16:21.05:689,21,0	0/1:10,0:15:44.23:113,0,44	0/0:19,0:23:18.01:0,18,415	0/0:11,0:12:6.95:0,7,242	0/1:12,0:13:3.01:92,0,3	0/1:22,0:28:6.80:7,0,63	1/1:15,0:14:6.46:49,6,0	0/0:11,0:17:3.44:0,3,304	0/0:11,0:12:12.04:0,12,350	0/0:23,0:26:8.59:0,9,359	1/1:11,8:19:15.01:490,15,0	1/1:15,11:28:39.13:1431,39,0	1/1:8,5:13:6.96:237,7,0	1/1:6,6:12:9.03:353,9,0
chr10	56254561	.	AAGAGAG	A	203.61	PASS	AB=0.918;AC=10;AF=0.227;AN=44;BaseQRankSum=0.425;DP=536;FS=8.930;HRun=0;HaplotypeScore=113.3542;InbreedingCoeff=0.3817;MQ=74.24;MQ0=9;MQRankSum=-0.200;QD=2.42;ReadPosRankSum=0.120;VQSLOD=1.6775;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:11.96:0,12,114	0/0:10,0:10:9.91:0,10,128	./.	./.	1/1:11,0:11:2.88:48,3,0	1/1:11,0:11:1.36:5,1,0	0/1:24,1:25:12.02:74,0,12	0/0:24,0:24:9.03:0,9,139	0/0:21,0:21:18.06:0,18,497	0/0:16,0:16:18.06:0,18,463	./.	./.	0/0:26,0:26:36.57:0,37,579	0/0:11,0:11:9.03:0,9,198	0/0:21,0:21:18.06:0,18,488	1/1:14,1:15:3.48:61,3,0	0/0:23,0:24:0.47:0,0,1	1/1:6,2:8:3.01:60,3,0	./.	0/0:8,0:8:3.90:0,4,51	0/0:36,0:35:29.95:0,30,716	0/0:17,3:19:0:0,0,0	./.	0/1:12,0:14:26.59:74,0,27	0/0:12,0:13:9.01:0,9,177	0/0:17,0:17:21.06:0,21,461	0/0:13,0:13:6.02:0,6,139	0/0:11,0:10:3.01:0,3,47
chr10	56257782	.	T	TAATAAATAAATAAATA	6156.35	PASS	AC=16;AF=0.320;AN=50;BaseQRankSum=-0.828;DP=386;FS=7.250;HRun=0;HaplotypeScore=148.0144;InbreedingCoeff=0.8912;MQ=54.07;MQ0=4;MQRankSum=-8.398;QD=79.95;ReadPosRankSum=-0.822;VQSLOD=4.0383;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:32:78.24:0,78,2970	0/0:5,0:5:12.04:0,12,408	./.	./.	0/0:27,0:27:48.16:0,48,1830	1/1:9,3:11:12.04:720,12,0	1/1:4,1:6:6.02:381,6,0	0/0:33,0:33:72.23:0,72,2760	0/0:12,0:12:9.03:0,9,373	0/0:13,0:13:18.06:0,18,713	0/0:20,0:19:36.11:0,36,1353	1/1:5,0:5:9.03:341,9,0	0/0:11,0:11:18.06:0,18,655	0/0:9,0:9:15.05:0,15,669	0/0:8,0:8:15.05:0,15,484	1/1:5,2:7:12.04:747,12,0	1/1:11,5:18:30.10:1903,30,0	1/1:9,5:14:15.05:1147,15,0	0/0:18,0:18:39.12:0,39,1452	0/0:13,0:13:18.06:0,18,609	0/0:10,0:10:15.05:0,15,542	./.	1/1:8,1:9:3.01:229,3,0	1/1:4,2:6:12.04:689,12,0	0/0:14,0:14:27.09:0,27,1094	0/0:25,0:25:63.22:0,63,2654	0/0:19,0:19:45.14:0,45,1649	0/0:23,0:23:57.20:0,57,2206
chr10	56258090	.	AC	A	4129.24	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=12.328;DP=614;FS=1.182;HRun=8;HaplotypeScore=59.6928;InbreedingCoeff=0.9981;MQ=73.47;MQ0=6;MQRankSum=-1.047;QD=22.81;ReadPosRankSum=3.169;VQSLOD=4.2175;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:57.15:0,57,663	0/0:7,0:7:18.06:0,18,217	0/0:28,1:25:25.20:0,25,561	0/0:28,0:25:35:0,35,403	0/0:23,0:23:60.17:0,60,706	1/1:5,18:22:50.76:474,51,0	1/1:1,15:16:45.07:434,45,0	0/0:19,0:19:45.14:0,45,534	0/0:28,0:28:81.24:0,81,967	0/0:28,0:28:70.75:0,71,812	0/0:15,0:15:45.12:0,45,531	1/1:4,20:21:48.07:460,48,0	0/0:20,1:21:25.21:0,25,582	0/0:24,0:24:69.21:0,69,834	0/0:29,0:29:81.21:0,81,933	1/1:2,13:14:36.06:347,36,0	1/1:2,19:21:59.77:560,60,0	1/1:0,21:21:63.10:608,63,0	0/0:16,0:16:36.10:0,36,423	0/0:16,0:16:42.02:0,42,485	0/0:28,0:28:78.24:0,78,941	1/1:4,18:20:51.08:492,51,0	1/1:2,13:13:33.04:318,33,0	1/1:4,20:22:45.06:434,45,0	0/0:22,0:22:54.16:0,54,639	0/0:26,0:26:69.16:0,69,806	0/0:21,0:21:57.17:0,57,686	0/0:28,0:27:75.20:0,75,886
chr10	56258797	.	C	CT	202.57	PASS	AB=1.000;AC=13;AF=0.283;AN=46;BaseQRankSum=1.215;DP=115;FS=0.000;HRun=1;HaplotypeScore=24.1673;InbreedingCoeff=0.5552;MQ=90.52;MQ0=0;MQRankSum=-0.037;QD=10.66;ReadPosRankSum=-1.686;VQSLOD=0.6460;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:8:8.21:0,8,71	./.	0/0:9,0:4:5.03:0,5,31	0/0:17,0:10:0.74:0,1,125	0/0:5,0:5:15.05:0,15,209	1/1:2,0:2:5.99:48,6,0	1/1:1,3:4:11.84:99,12,0	0/0:15,0:15:37.03:0,37,452	0/0:3,0:3:9.03:0,9,126	./.	0/0:5,0:5:12.02:0,12,149	1/1:0,1:1:2.84:14,3,0	0/0:2,0:2:3.74:0,4,12	0/0:2,0:2:6.02:0,6,84	0/0:1,0:1:3:0,3,25	1/1:2,0:2:6.01:68,6,0	1/1:1,1:2:6:60,6,0	./.	0/0:2,0:2:6.01:0,6,70	0/1:5,0:5:0.20:0,0,99	0/0:11,0:11:30.08:0,30,393	./.	1/1:2,1:3:4.18:53,4,0	./.	0/0:3,0:3:9.03:0,9,126	0/0:2,0:2:5.23:0,5,48	0/0:4,0:4:12.04:0,12,167	0/0:4,0:4:12.04:0,12,165
chr10	56259550	.	C	CAGAATTCCT	18666.84	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-2.473;DP=588;FS=0.737;HRun=0;HaplotypeScore=161.0476;InbreedingCoeff=0.9946;MQ=78.85;MQ0=0;MQRankSum=-16.252;QD=102.00;ReadPosRankSum=-3.105;VQSLOD=4.6922;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,126,3898	0/0:4,0:4:12.04:0,12,372	0/0:15,0:15:38.91:0,39,823	0/0:22,0:22:45.89:0,46,1161	0/0:19,0:19:57.20:0,57,1723	1/1:3,12:17:42.14:1978,42,0	1/1:8,18:30:69.24:3061,69,0	0/0:23,0:23:69.21:0,69,1826	0/0:26,0:26:66.23:0,66,1938	0/0:30,0:30:90.30:0,90,2565	0/0:15,0:15:39.13:0,39,1165	1/1:11,14:25:66.23:2900,66,0	0/0:20,0:20:60.21:0,60,1814	0/0:25,0:25:75.24:0,75,2115	0/0:23,0:23:69.22:0,69,2005	1/1:9,18:29:72.25:3323,72,0	1/1:7,6:14:30.10:1233,30,0	1/1:8,5:13:27.09:1209,27,0	0/0:22,0:22:63.22:0,63,1955	0/0:21,0:21:63.22:0,63,1939	0/0:17,0:17:45.15:0,45,1280	1/1:5,16:25:57.20:2750,57,0	1/1:5,9:16:36.12:1470,36,0	1/1:8,6:14:24.65:742,25,0	0/0:21,0:21:60.19:0,60,1773	0/0:24,0:24:69.24:0,69,2026	0/0:19,0:19:57.20:0,57,1766	0/0:15,0:15:42.14:0,42,1303
chr10	56259610	.	TACACACACACACACACACAC	T	7175.23	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=0.279;DP=608;FS=1.737;HRun=0;HaplotypeScore=315.9664;InbreedingCoeff=0.8739;MQ=62.99;MQ0=8;MQRankSum=-9.506;QD=41.96;ReadPosRankSum=0.808;VQSLOD=3.1953;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:52:99:0,99,4645	0/0:9,0:8:12.04:0,12,545	0/0:27,0:18:17.04:0,17,247	0/0:31,0:24:33.09:0,33,982	0/0:25,0:26:48.16:0,48,2900	1/1:7,6:13:21.03:802,21,0	1/1:25,0:25:48.71:818,49,0	0/0:19,0:17:30.10:0,30,944	0/0:27,0:27:36.09:0,36,1198	0/0:34,0:33:57.18:0,57,1650	0/0:16,0:16:6.02:0,6,351	1/1:15,10:25:48:1460,48,0	0/0:14,0:14:33.09:0,33,1619	0/0:20,0:21:39.13:0,39,1836	0/0:22,0:22:8.88:0,9,184	1/1:16,7:23:35.96:1120,36,0	1/1:12,1:13:21.03:661,21,0	1/1:13,1:14:22.61:522,23,0	0/0:18,0:18:45.13:0,45,1735	0/0:15,0:25:15.04:0,15,303	0/0:29,0:29:42.14:0,42,1782	1/1:19,5:24:41.80:870,42,0	1/1:10,2:12:23.64:460,24,0	0/1:22,0:22:8.43:461,0,8	0/0:25,0:25:33.10:0,33,948	0/0:22,0:21:33.11:0,33,1655	0/0:17,0:16:28.91:0,29,1429	0/0:3,0:3:6.02:0,6,190
chr10	56259630	.	C	CAA	3094.84	PASS	AB=0.850;AC=17;AF=0.304;AN=56;BaseQRankSum=11.894;DP=675;FS=11.434;HRun=1;HaplotypeScore=182.8191;InbreedingCoeff=0.7985;MQ=48.26;MQ0=13;MQRankSum=-9.771;QD=16.64;ReadPosRankSum=0.715;VQSLOD=-0.1460;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:62,0:61:99:0,121,1409	0/0:10,0:9:1.28:0,1,99	0/0:23,0:10:22.47:0,22,173	0/0:27,0:17:41.80:0,42,383	0/0:30,0:29:41.88:0,42,626	1/1:14,0:14:7.27:190,7,0	1/1:26,4:29:17.58:421,18,0	0/0:23,0:19:53.63:0,54,411	0/0:26,0:26:29.02:0,29,269	0/0:32,0:31:59.98:0,60,472	0/0:23,0:23:19.28:0,19,150	1/1:30,2:32:55.67:753,56,0	0/0:21,0:21:51.77:0,52,546	0/0:26,0:26:59.99:0,60,648	0/0:30,0:30:29.72:0,30,233	1/1:18,2:20:27.40:432,27,0	1/1:9,4:13:23.93:293,24,0	0/1:14,3:16:24.17:161,0,24	0/0:25,0:22:53.77:0,54,393	0/0:22,0:22:2.65:0,3,149	0/0:36,0:35:6.06:0,6,316	1/1:23,1:24:49.97:495,50,0	1/1:13,1:14:23.35:259,23,0	1/1:11,11:22:11:290,11,0	0/0:20,0:20:24.64:0,25,184	0/0:29,0:28:61.17:0,61,493	0/0:19,0:18:37.83:0,38,264	0/0:4,0:4:5.98:0,6,47
chr10	56259710	.	CAG	C	2760.36	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=18.364;DP=928;FS=7.735;HRun=0;HaplotypeScore=175.9768;InbreedingCoeff=0.8413;MQ=51.52;MQ0=17;MQRankSum=-2.679;QD=8.85;ReadPosRankSum=2.013;VQSLOD=2.4165;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:73,0:72:99:0,170,3023	0/0:14,0:14:3.81:0,4,548	0/0:47,0:13:28.79:0,29,336	0/0:57,0:14:26.64:0,27,304	0/0:17,0:17:48.07:0,48,841	1/1:22,0:21:15.91:234,16,0	1/1:38,0:38:1.47:277,1,0	0/0:44,0:44:94.72:0,95,1516	0/0:42,0:42:88.47:0,88,1974	0/0:26,0:26:78.15:0,78,1302	0/0:23,0:23:66.15:0,66,1110	1/1:30,0:30:40.25:353,40,0	0/0:26,0:25:66.07:0,66,1207	0/0:24,0:24:63.20:0,63,1180	0/0:25,0:25:47.05:0,47,845	0/1:33,0:31:14.30:307,0,14	1/1:36,1:37:61.08:404,61,0	1/1:37,1:35:61.95:453,62,0	0/0:23,0:21:59.44:0,59,981	0/0:15,0:15:42.08:0,42,738	0/0:77,0:76:99:0,168,3205	1/1:23,0:23:22.75:189,23,0	1/1:25,1:26:19.94:223,20,0	1/1:64,1:64:57.04:520,57,0	0/0:13,0:13:19.35:0,19,674	0/0:41,0:41:78.89:0,79,1819	0/0:22,0:22:60.04:0,60,1094	0/0:7,0:7:7.50:0,7,297
chr10	56259712	.	GAC	G	7813.71	PASS	AB=0.938;AC=20;AF=0.357;AN=56;BaseQRankSum=14.036;DP=919;FS=8.791;HRun=0;HaplotypeScore=158.1543;InbreedingCoeff=0.7956;MQ=51.65;MQ0=18;MQRankSum=-6.180;QD=23.82;ReadPosRankSum=-0.608;VQSLOD=4.7217;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:71,1:71:99:0,105,2373	0/1:12,2:14:38.84:39,0,414	0/0:49,0:15:1.49:0,1,178	0/0:57,0:15:23.40:0,23,284	0/0:16,0:16:42.13:0,42,668	1/1:8,13:20:51.04:602,51,0	1/1:10,28:38:30.79:752,31,0	0/0:40,0:40:75.83:0,76,1093	0/0:40,2:42:36.20:0,36,1596	0/0:26,0:26:63.21:0,63,1011	0/0:23,0:23:57.09:0,57,863	1/1:11,18:29:69.19:831,69,0	0/0:25,0:25:63.21:0,63,1007	0/0:23,0:23:60.21:0,60,989	0/0:23,1:24:4.60:0,5,579	1/1:10,22:31:71.76:897,72,0	1/1:6,31:37:81.13:992,81,0	1/1:11,27:35:87.06:1056,87,0	0/0:25,0:23:57.18:0,57,876	0/0:15,0:15:36.12:0,36,594	0/0:76,1:76:99:0,129,2629	1/1:10,13:23:54.16:661,54,0	1/1:5,19:24:31.84:682,32,0	1/1:9,54:64:94.41:1284,94,0	0/0:13,0:13:30.48:0,30,586	0/0:41,0:41:98.70:0,99,1564	0/0:22,0:22:57.19:0,57,918	0/1:7,0:7:18.25:18,0,230
chr10	56259726	.	CAG	C	2775.12	PASS	AB=0.992;AC=15;AF=0.268;AN=56;BaseQRankSum=17.249;DP=911;FS=11.288;HRun=0;HaplotypeScore=177.8117;InbreedingCoeff=0.6510;MQ=54.44;MQ0=12;MQRankSum=-3.283;QD=9.22;ReadPosRankSum=1.752;VQSLOD=2.4608;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:67,1:68:99:0,143,2882	0/0:12,0:12:4.82:0,5,471	0/0:49,0:17:32.18:0,32,451	0/0:55,1:20:11.64:0,12,435	0/0:17,0:17:48.11:0,48,823	1/1:18,0:17:21.82:242,22,0	0/1:35,0:35:54.30:263,0,54	0/0:37,0:37:83.34:0,83,1414	0/0:40,0:40:78.31:0,78,1878	0/0:26,0:26:75.09:0,75,1202	0/0:21,0:21:55.65:0,56,931	1/1:25,0:25:60.59:370,61,0	0/0:24,0:24:71.94:0,72,1213	0/0:29,0:29:84.67:0,85,1398	0/0:28,0:28:29.38:0,29,687	1/1:30,1:29:56.07:392,56,0	0/1:40,1:41:38.69:319,0,39	1/1:34,0:31:86.77:484,87,0	0/0:21,0:21:61.92:0,62,1019	0/0:17,0:17:45.08:0,45,751	0/0:81,1:81:99:0,158,3082	0/1:26,0:26:28.14:173,0,28	1/1:27,0:27:5.64:190,6,0	1/1:63,1:63:79.62:529,80,0	0/0:18,0:18:17.18:0,17,693	0/0:36,0:36:87.33:0,87,1838	0/0:22,0:22:60.17:0,60,1065	0/0:6,0:6:2.58:0,3,274
chr10	56259790	.	A	AAGAC	27667.49	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-9.259;DP=886;FS=3.674;HRun=0;HaplotypeScore=162.6604;InbreedingCoeff=0.9472;MQ=53.17;MQ0=14;MQRankSum=-1.947;QD=41.61;ReadPosRankSum=-0.522;VQSLOD=5.1083;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:51:99:0,117,1901	1/1:2,5:7:8.97:231,9,0	0/0:45,0:16:30.05:0,30,404	0/0:44,0:26:36.80:0,37,730	0/0:17,0:17:48.16:0,48,816	1/1:8,7:15:24.08:565,24,0	1/1:23,15:37:84.29:1921,84,0	1/1:12,37:50:99:2314,114,0	1/1:10,21:32:39.13:998,39,0	1/1:8,24:33:75.10:1774,75,0	1/1:6,11:17:15.05:325,15,0	1/1:21,22:42:96.26:2227,96,0	0/0:28,0:28:81.23:0,81,1325	0/0:35,0:35:84.22:0,84,1374	1/1:2,34:38:45.15:1064,45,0	1/1:18,15:31:66.18:1399,66,0	1/1:21,17:38:67.07:1825,67,0	1/1:16,9:23:34.42:990,34,0	1/1:2,5:7:15.05:322,15,0	1/1:2,19:21:48.16:1169,48,0	1/1:13,67:85:99:2584,101,0	1/1:9,12:22:55.70:1263,56,0	1/1:14,9:23:44.87:937,45,0	1/1:24,27:51:77.52:1837,78,0	1/1:3,22:25:45.15:1133,45,0	1/1:5,31:36:87.16:1887,87,0	1/1:2,15:20:33.10:824,33,0	1/1:2,1:3:3.01:77,3,0
chr10	56259949	.	ACG	A	3792.23	PASS	AB=0.910;AC=29;AF=0.518;AN=56;BaseQRankSum=4.100;DP=683;FS=2.661;HRun=0;HaplotypeScore=177.5591;InbreedingCoeff=0.2117;MQ=50.18;MQ0=19;MQRankSum=-1.224;QD=8.70;ReadPosRankSum=1.906;VQSLOD=3.3012;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:22.54:0,23,1018	0/1:9,0:9:15.16:15,0,38	0/1:41,1:12:38.51:39,0,337	0/0:47,0:14:18.68:0,19,342	0/0:13,0:13:26.71:0,27,444	1/1:13,0:19:32.70:435,33,0	1/1:2,13:28:5.69:70,6,0	0/1:31,10:39:19.55:411,0,20	0/1:21,2:22:29.44:29,0,85	0/1:21,1:22:25.86:26,0,122	0/0:2,0:2:3:0,3,25	1/1:15,1:21:35.72:497,36,0	0/0:25,0:24:2.51:0,3,880	0/0:24,0:23:53.75:0,54,810	0/0:23,2:24:6.14:0,6,50	1/1:0,10:18:11.78:161,12,0	1/1:5,14:25:17.29:185,17,0	1/1:20,0:22:26.86:501,27,0	0/1:13,4:16:27.46:177,0,27	0/0:10,0:9:2.85:0,3,15	0/0:56,11:66:24.98:0,25,280	1/1:1,11:18:3:47,3,0	1/1:5,0:6:12.04:175,12,0	1/1:29,0:44:59.75:827,60,0	0/1:16,2:18:3.61:4,0,70	0/1:21,3:24:17.55:127,0,18	0/1:26,2:28:21.29:21,0,178	1/1:5,1:6:0.61:46,1,0
chr10	56259951	.	GC	G	1203.51	PASS	AB=0.838;AC=16;AF=0.286;AN=56;BaseQRankSum=6.026;DP=665;FS=12.726;HRun=1;HaplotypeScore=176.5191;InbreedingCoeff=0.6469;MQ=50.21;MQ0=19;MQRankSum=1.242;QD=5.96;ReadPosRankSum=3.198;VQSLOD=-0.6658;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:68.45:0,68,1031	0/0:8,0:8:14.12:0,14,157	0/0:40,1:12:21.66:0,22,352	0/0:44,0:13:25.73:0,26,378	0/0:13,0:13:33.08:0,33,468	1/1:13,8:19:20.26:229,20,0	1/1:15,14:28:5.21:23,5,0	0/0:39,0:38:47.75:0,48,480	0/0:21,0:21:36.27:0,36,249	0/0:22,0:22:48.09:0,48,377	0/0:2,0:2:2.88:0,3,15	1/1:17,6:22:34.52:282,35,0	0/0:25,0:24:66:0,66,950	0/0:24,0:23:54.18:0,54,831	0/0:24,1:25:14.37:0,14,107	1/1:10,7:18:4.68:61,5,0	0/1:18,6:24:20.96:54,0,21	0/1:18,3:20:39.26:189,0,39	0/0:17,0:16:14.45:0,14,138	0/0:3,0:9:3:0,3,29	0/0:64,0:64:90.74:0,91,650	1/1:11,6:17:1.79:26,2,0	1/1:5,1:6:11.99:103,12,0	1/1:28,15:43:40.52:416,41,0	0/0:17,0:17:15.82:0,16,135	0/0:23,0:23:51.29:0,51,364	0/0:27,0:27:18.92:0,19,249	0/0:6,0:6:3.61:0,4,24
chr10	56259952	.	C	CAG	3650.81	PASS	AB=0.848;AC=34;AF=0.630;AN=54;BaseQRankSum=9.361;DP=659;FS=2.605;HRun=0;HaplotypeScore=176.4500;InbreedingCoeff=0.3410;MQ=49.95;MQ0=19;MQRankSum=1.084;QD=7.75;ReadPosRankSum=4.122;VQSLOD=3.4876;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:63.58:0,64,890	0/1:8,0:8:5.61:100,0,6	0/0:40,0:11:23.99:0,24,327	0/0:44,0:13:17.92:0,18,270	0/0:11,0:11:27.06:0,27,370	1/1:22,0:20:27.86:241,28,0	1/1:29,0:28:5.87:35,6,0	0/1:37,0:37:53.21:388,0,53	1/1:19,2:20:32.91:305,33,0	1/1:7,16:23:29.18:267,29,0	1/1:1,0:1:2.99:24,3,0	1/1:22,0:21:32.10:213,32,0	0/0:26,0:25:62.24:0,62,822	0/0:25,0:24:45.15:0,45,671	1/1:8,17:24:6.17:83,6,0	1/1:18,0:18:11.56:65,12,0	1/1:25,0:25:8.85:65,9,0	0/1:20,0:19:11.53:157,0,12	0/1:16,0:15:36.22:97,0,36	./.	1/1:67,1:67:68.30:655,68,0	1/1:17,0:17:2.68:11,3,0	1/1:5,0:5:11.86:80,12,0	1/1:42,0:42:39.74:302,40,0	0/1:6,9:15:6.56:94,0,7	0/1:23,0:23:6.76:303,0,7	0/1:10,16:27:7.23:64,0,7	0/1:1,5:6:6.91:101,0,7
chr10	56262815	.	G	GGTAGGGTGCTTGCT	19670.94	PASS	AB=0.800;AC=55;AF=0.982;AN=56;BaseQRankSum=0.627;DP=188;FS=14.472;HRun=0;HaplotypeScore=220.7942;InbreedingCoeff=-0.0562;MQ=63.64;MQ0=0;MQRankSum=-1.585;QD=104.63;ReadPosRankSum=1.486;VQSLOD=3.1216;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:18:48.16:2234,48,0	1/1:2,0:2:6.02:242,6,0	1/1:1,0:5:12.04:546,12,0	0/1:3,1:4:2.59:374,0,3	1/1:7,0:7:3.01:157,3,0	1/1:6,0:6:11.97:475,12,0	1/1:8,0:8:15.05:488,15,0	1/1:5,0:5:15.05:581,15,0	1/1:3,0:3:6.02:336,6,0	1/1:11,0:11:27.09:1319,27,0	1/1:8,0:8:24.08:1313,24,0	1/1:12,0:12:25.33:1444,25,0	1/1:6,0:6:15.05:764,15,0	1/1:5,0:5:12.04:724,12,0	1/1:8,0:8:18.05:820,18,0	1/1:5,0:5:15.05:825,15,0	1/1:14,0:14:30.10:1427,30,0	1/1:3,0:3:3.01:176,3,0	1/1:3,0:3:9.03:344,9,0	1/1:3,0:3:6.02:217,6,0	1/1:12,0:12:15.05:613,15,0	1/1:4,0:4:8.99:298,9,0	1/1:5,0:5:12:447,12,0	1/1:3,0:3:9.03:394,9,0	1/1:4,0:4:9.03:493,9,0	1/1:9,0:9:21.07:807,21,0	1/1:13,0:13:27.09:1516,27,0	1/1:2,0:2:6.02:297,6,0
chr10	56263567	.	GCGCACACACACACACA	G	1739.23	PASS	AB=0.538;AC=17;AF=0.304;AN=56;BaseQRankSum=5.098;DP=568;FS=0.000;HRun=0;HaplotypeScore=179.5647;InbreedingCoeff=0.6917;MQ=58.52;MQ0=7;MQRankSum=-3.596;QD=10.41;ReadPosRankSum=1.762;VQSLOD=2.0964;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:37:67.92:0,68,3119	0/0:2,0:2:3.01:0,3,90	1/1:6,0:5:5.75:32,6,0	0/0:5,0:5:0.83:0,1,2	0/0:6,0:6:5.98:0,6,88	1/1:14,1:15:14.94:139,15,0	1/1:1,0:31:2.61:37,3,0	0/0:20,0:20:40.77:0,41,476	0/0:26,0:26:12.66:0,13,122	0/0:25,0:24:63.85:0,64,986	0/0:2,0:2:5.74:0,6,30	1/1:2,29:31:15.05:702,15,0	0/0:20,0:19:47.99:0,48,1594	0/0:26,0:25:29.27:0,29,2134	0/0:19,0:19:24.43:0,24,313	1/1:2,8:11:5.75:52,6,0	1/1:1,23:25:9.03:376,9,0	1/1:0,21:22:12.04:525,12,0	0/0:18,0:17:42.79:0,43,428	0/0:7,0:7:1.56:0,2,39	0/0:94,0:90:99:0,110,1292	1/1:4,12:17:3.01:46,3,0	0/1:1,1:6:0.40:0,0,0	0/0:0,30:30:0.94:0,1,2	0/0:10,0:10:8.93:0,9,84	0/0:28,0:28:66.36:0,66,887	0/0:12,0:12:11.67:0,12,98	0/0:12,0:12:9.44:0,9,375
chr10	56263569	.	GCACACACA	G	2195.92	PASS	AB=0.694;AC=26;AF=0.565;AN=46;BaseQRankSum=7.167;DP=556;FS=5.018;HRun=0;HaplotypeScore=128.4240;InbreedingCoeff=0.4752;MQ=58.23;MQ0=7;MQRankSum=-0.663;QD=6.17;ReadPosRankSum=0.702;VQSLOD=2.1428;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:36:45.13:0,45,1272	0/0:2,0:2:2.99:0,3,23	./.	./.	./.	0/0:15,0:14:2.60:0,3,10	1/1:30,0:30:2.09:11,2,0	0/0:19,0:19:16.19:0,16,97	1/1:7,17:26:4.98:101,5,0	0/1:9,16:24:23.63:294,0,24	./.	1/1:31,0:31:15.05:272,15,0	0/0:17,0:16:21.07:0,21,638	0/0:24,0:23:39.12:0,39,1010	0/0:10,7:18:0.47:0,0,1	./.	1/1:27,0:26:8.38:147,8,0	1/1:22,0:22:12.04:203,12,0	1/1:12,5:17:16.60:236,17,0	1/1:2,6:8:3.48:31,3,0	0/1:63,24:83:14.95:30,0,15	1/1:16,0:17:1.90:6,2,0	0/0:7,0:6:0:0,0,0	0/0:30,0:30:0.47:0,0,1	1/1:3,6:10:3.01:56,3,0	1/1:10,17:28:28.40:574,28,0	1/1:1,10:12:5.72:131,6,0	1/1:6,6:13:7.97:254,8,0
chr10	56264155	.	AC	A	3788.96	PASS	AB=0.900;AC=19;AF=0.339;AN=56;BaseQRankSum=14.178;DP=464;FS=6.213;HRun=2;HaplotypeScore=73.0760;InbreedingCoeff=0.9166;MQ=52.28;MQ0=15;MQRankSum=-3.517;QD=26.87;ReadPosRankSum=2.108;VQSLOD=3.0617;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,102,1529	0/1:8,1:9:14.88:15,0,288	0/0:16,0:5:14.87:0,15,175	0/0:20,0:10:18.03:0,18,244	0/0:10,0:10:30.10:0,30,449	1/1:0,20:20:51.17:662,51,0	1/1:2,13:12:30.10:389,30,0	0/0:39,0:36:99:0,105,1449	0/0:22,0:22:63.21:0,63,942	0/0:15,0:15:42.14:0,42,630	0/0:8,0:8:24.08:0,24,359	1/1:0,12:12:33.11:428,33,0	0/0:9,0:9:27.09:0,27,405	0/0:9,0:9:27.09:0,27,404	0/0:20,0:20:60.20:0,60,899	1/1:0,17:17:33.11:428,33,0	1/1:1,13:13:33.11:428,33,0	1/1:0,12:12:30.10:389,30,0	0/0:22,0:17:51.15:0,51,725	0/0:13,0:12:36.08:0,36,514	0/0:32,0:32:90.29:0,90,1327	1/1:2,9:10:18.06:233,18,0	1/1:0,14:14:33.11:428,33,0	1/1:0,17:16:30.10:389,30,0	0/0:9,0:9:27.09:0,27,404	0/0:16,0:15:45.15:0,45,674	0/0:16,0:16:42.14:0,42,629	0/0:13,0:13:39.13:0,39,584
chr10	56289477	.	CAA	C	1794.97	PASS	AB=0.688;AC=14;AF=0.250;AN=56;BaseQRankSum=5.057;DP=429;FS=0.000;HRun=12;HaplotypeScore=59.1371;InbreedingCoeff=0.7744;MQ=75.59;MQ0=1;MQRankSum=0.393;QD=16.62;ReadPosRankSum=3.104;VQSLOD=2.2147;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:33:85.61:0,86,1161	0/0:5,0:5:9.03:0,9,134	0/0:13,0:11:6:0,6,69	0/1:12,1:13:14.18:14,0,119	0/0:25,0:25:60.07:0,60,800	1/1:2,12:14:30.02:305,30,0	1/1:3,13:16:33.06:336,33,0	0/0:17,0:20:48.08:0,48,611	0/0:14,0:15:42.12:0,42,589	0/0:20,0:20:54.16:0,54,750	0/0:15,0:15:36.12:0,36,536	1/1:1,10:11:21.04:214,21,0	0/0:15,0:15:39.10:0,39,524	0/0:10,0:10:30.07:0,30,417	0/0:11,0:12:32.55:0,33,412	0/1:0,1:4:15.83:20,0,16	0/0:3,1:20:7.92:0,8,107	0/0:1,0:15:27.45:0,27,96	0/0:15,0:15:33.08:0,33,451	0/0:14,0:16:39.08:0,39,526	0/0:8,0:8:18.01:0,18,224	1/1:2,13:15:36.07:366,36,0	1/1:4,15:19:38.68:396,39,0	1/1:0,15:15:33.08:336,33,0	0/0:11,0:11:21.03:0,21,262	0/0:10,0:12:29.07:0,29,375	0/0:25,0:25:71.58:0,72,920	0/0:13,0:13:31.66:0,32,445
chr10	56290087	.	C	CGT	1242.90	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-4.929;DP=789;FS=4.824;HRun=0;HaplotypeScore=103.2062;InbreedingCoeff=0.9911;MQ=75.70;MQ0=8;MQRankSum=4.609;QD=31.87;ReadPosRankSum=-4.431;VQSLOD=4.3101;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,138,1819	1/1:0,6:6:15.05:280,15,0	0/0:54,0:40:26.59:0,27,760	0/0:80,0:51:89.51:0,90,860	0/0:22,0:22:66.18:0,66,907	0/0:25,0:25:71.89:0,72,922	0/0:22,0:22:66.14:0,66,866	1/1:5,28:33:74.62:1081,75,0	0/0:25,0:25:72.04:0,72,871	0/0:25,0:25:75.14:0,75,943	0/0:16,0:16:39.10:0,39,533	0/0:18,0:18:48.12:0,48,632	0/0:21,0:22:60.10:0,60,777	0/0:23,0:23:66.13:0,66,853	0/0:34,0:34:96.15:0,96,1191	0/0:21,0:21:54.14:0,54,735	0/0:31,0:31:90.15:0,90,1145	0/0:20,0:20:57.07:0,57,746	0/0:30,0:30:36.14:0,36,792	0/0:17,0:17:48.09:0,48,600	0/0:49,0:48:99:0,138,1845	0/0:17,0:18:47.49:0,47,631	0/0:17,0:17:45.10:0,45,600	0/0:33,0:33:99:0,99,1396	0/0:23,0:23:63.12:0,63,791	0/0:29,0:29:81.19:0,81,1096	0/0:27,0:27:78.23:0,78,1089	0/0:14,0:14:42.02:0,42,471
chr10	56291749	.	TTTTGTTA	T	616	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.652;DP=491;FS=10.895;HRun=0;HaplotypeScore=114.8801;InbreedingCoeff=0.9876;MQ=75.93;MQ0=0;MQRankSum=-5.046;QD=51.33;ReadPosRankSum=-1.357;VQSLOD=2.6753;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,117,4712	0/0:8,0:8:24.08:0,24,1006	0/0:15,0:15:44.99:0,45,1481	0/0:14,0:14:37.94:0,38,1002	1/1:0,12:12:27.09:710,27,0	0/0:13,0:13:36.10:0,36,1377	0/0:16,0:16:48.16:0,48,1947	0/0:23,0:23:69.22:0,69,2582	0/0:10,0:10:30.10:0,30,1240	0/0:11,0:11:33.11:0,33,1254	0/0:20,0:20:60.21:0,60,2501	0/0:27,0:27:78.27:0,78,3256	0/0:12,0:12:36.12:0,36,1456	0/0:13,0:13:39.13:0,39,1629	0/0:19,0:19:57.20:0,57,2343	0/0:15,0:15:45.15:0,45,1854	0/0:26,0:26:78.27:0,78,3228	0/0:18,0:18:51.15:0,51,1925	0/0:12,0:12:33.11:0,33,1332	0/0:20,0:20:60.21:0,60,2519	0/0:23,0:23:69.21:0,69,2510	0/0:24,0:24:72.23:0,72,2763	0/0:18,0:18:51.16:0,51,2039	0/0:27,0:27:81.28:0,81,3295	0/0:16,0:16:48.16:0,48,1982	0/0:17,0:17:51.16:0,51,2041	0/0:17,0:17:48.16:0,48,1973	0/0:6,0:6:18.06:0,18,688
chr10	56291826	.	GCCCAGC	G	2163.53	PASS	AB=0.794;AC=18;AF=0.321;AN=56;BaseQRankSum=6.091;DP=308;FS=2.516;HRun=0;HaplotypeScore=70.9337;InbreedingCoeff=0.7682;MQ=83.15;MQ0=0;MQRankSum=-7.922;QD=16.77;ReadPosRankSum=1.503;VQSLOD=2.8389;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:33.11:0,33,1001	0/0:9,0:9:15.05:0,15,491	0/0:18,0:18:19.27:0,19,361	0/1:15,0:15:16.18:16,0,262	0/0:9,0:9:12.04:0,12,346	1/1:5,9:14:9.03:190,9,0	1/1:3,12:15:24.08:508,24,0	0/0:20,0:20:24.06:0,24,455	0/0:11,0:11:30.09:0,30,886	0/0:9,0:9:12.04:0,12,386	0/0:4,0:4:6.02:0,6,156	1/1:4,7:11:12:161,12,0	0/0:6,0:6:15.05:0,15,487	0/0:9,0:9:15.05:0,15,477	0/0:11,0:11:18.03:0,18,445	1/1:5,7:12:27.08:459,27,0	1/1:6,6:12:15.05:284,15,0	1/1:8,10:18:18.06:381,18,0	0/0:7,0:7:9.03:0,9,197	0/0:8,0:8:12.04:0,12,351	0/0:13,0:13:24.06:0,24,710	1/1:4,4:8:9.03:164,9,0	0/1:3,7:10:0:0,0,0	1/1:9,5:14:12:193,12,0	0/0:4,0:4:6.02:0,6,198	0/0:10,0:10:6.02:0,6,197	0/0:5,0:5:9.03:0,9,204	0/0:5,0:5:12.04:0,12,389
chr10	56292311	.	A	ACACACGCACACGCATACG	11619.89	PASS	AB=0.536;AC=17;AF=0.304;AN=56;BaseQRankSum=-7.925;DP=783;FS=2.699;HRun=0;HaplotypeScore=289.9925;InbreedingCoeff=0.8781;MQ=76.15;MQ0=0;MQRankSum=-10.660;QD=44.35;ReadPosRankSum=2.367;VQSLOD=3.8314;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,125,5434	0/0:16,0:16:45.11:0,45,1836	0/0:35,0:34:53.32:0,53,1900	0/0:37,0:34:62.92:0,63,1582	0/0:16,0:16:42.12:0,42,1703	1/1:3,3:21:9:769,9,0	0/1:6,4:45:10.74:1010,0,11	0/0:31,0:31:75.21:0,75,2565	0/0:28,0:28:66.20:0,66,2694	0/0:23,0:23:60.19:0,60,2202	0/0:15,0:15:45.14:0,45,1964	1/1:5,11:37:35.96:3072,36,0	0/0:21,0:21:54.16:0,54,2351	0/0:37,0:37:96.32:0,96,4522	0/0:25,0:25:69.21:0,69,2932	1/1:4,5:28:14.54:1281,15,0	1/1:6,5:35:12.04:1026,12,0	1/1:3,2:19:11.87:914,12,0	0/0:28,0:28:59.81:0,60,1656	0/0:24,0:24:48.12:0,48,1799	0/0:40,0:40:99:0,105,4139	1/1:3,5:22:18.06:1536,18,0	1/1:4,4:27:12.04:1025,12,0	1/1:10,3:28:12.04:986,12,0	0/0:21,0:21:51.16:0,51,2192	0/0:24,0:24:54.19:0,54,2582	0/0:44,0:44:99:0,111,4510	0/0:3,0:3:9:0,9,200
chr10	56292625	.	GC	G	818.74	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.639;DP=728;FS=3.636;HRun=1;HaplotypeScore=74.5564;InbreedingCoeff=0.9948;MQ=84.04;MQ0=0;MQRankSum=-3.500;QD=26.41;ReadPosRankSum=-0.772;VQSLOD=3.2894;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,144,2298	1/1:0,8:8:18.06:223,18,0	0/0:27,0:27:81.13:0,81,1224	0/0:18,0:18:44.92:0,45,711	0/0:29,0:29:84.25:0,84,1293	0/0:20,0:20:60.20:0,60,957	0/0:28,0:28:84.25:0,84,1291	1/1:4,19:23:62.31:716,62,0	0/0:27,0:27:81.28:0,81,1293	0/0:24,0:24:72.24:0,72,1132	0/0:25,0:25:72.25:0,72,1147	0/0:23,0:23:69.24:0,69,1102	0/0:28,0:28:84.27:0,84,1318	0/0:15,0:15:45.15:0,45,719	0/0:26,0:26:78.27:0,78,1247	0/0:35,0:35:99:0,105,1653	0/0:22,0:22:66.20:0,66,1029	0/0:28,0:28:84.24:0,84,1315	0/0:24,0:24:72.22:0,72,1104	0/0:17,0:17:51.17:0,51,813	0/0:44,0:44:99:0,132,2059	0/0:24,0:24:63.21:0,63,1002	0/0:24,0:24:63.20:0,63,977	0/0:41,0:41:99:0,120,1918	0/0:34,0:34:99:0,99,1579	0/0:23,0:23:66.22:0,66,1035	0/0:35,0:34:99:0,105,1640	0/0:8,0:8:24.08:0,24,384
chr10	56293054	.	T	TCTC	1258.20	PASS	AB=0.832;AC=12;AF=0.214;AN=56;BaseQRankSum=-5.126;DP=613;FS=29.201;HRun=0;HaplotypeScore=142.4871;InbreedingCoeff=0.0521;MQ=59.01;MQ0=15;MQRankSum=-3.002;QD=6.08;ReadPosRankSum=5.666;VQSLOD=1.1472;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:62.73:0,63,995	0/0:8,0:7:14.83:0,15,77	0/0:40,0:11:22.46:0,22,219	0/1:37,0:15:39.68:40,0,158	0/0:30,0:30:50.66:0,51,652	0/1:14,0:13:13.23:19,0,13	1/1:4,9:15:3.64:217,4,0	0/0:41,0:37:77.63:0,78,668	0/0:26,0:26:54.56:0,55,582	0/0:24,0:24:48.88:0,49,457	0/0:15,0:15:30.61:0,31,340	1/1:5,15:23:1.87:187,2,0	0/0:12,0:12:12.90:0,13,168	0/0:24,0:22:35.69:0,36,468	0/0:15,0:15:37.31:0,37,332	0/1:6,7:14:11.34:266,0,11	0/1:21,3:24:95.28:95,0,114	0/1:6,5:11:32.38:96,0,32	0/0:22,0:21:55.74:0,56,561	0/0:24,0:23:57.38:0,57,526	0/0:14,0:14:29.88:0,30,329	0/1:21,0:21:34.95:101,0,35	0/1:8,8:17:33.52:55,0,34	0/1:23,7:30:44.44:332,0,44	0/0:12,0:12:29.86:0,30,294	0/0:20,0:20:48.54:0,49,363	0/0:25,0:25:61.34:0,61,590	0/0:11,0:11:28.61:0,29,281
chr10	56293291	.	GT	G	4446.49	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=11.177;DP=602;FS=2.023;HRun=8;HaplotypeScore=62.7217;InbreedingCoeff=0.9926;MQ=78.87;MQ0=0;MQRankSum=-3.530;QD=23.91;ReadPosRankSum=2.631;VQSLOD=5.7557;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:93.27:0,93,1108	0/0:6,0:6:18.05:0,18,209	0/0:32,0:32:63.80:0,64,666	0/0:12,0:11:11.23:0,11,210	0/0:32,0:32:75.22:0,75,895	1/1:3,17:20:45.07:435,45,0	1/1:3,13:16:25.37:334,25,0	0/0:18,0:18:42.12:0,42,497	0/0:22,0:22:66.20:0,66,797	0/0:30,0:30:87.27:0,87,1049	0/0:21,0:21:60.18:0,60,725	1/1:0,20:20:54.09:521,54,0	0/0:16,0:17:51.02:0,51,594	0/0:16,0:15:36.11:0,36,435	0/0:23,0:23:66.20:0,66,797	1/1:1,20:21:47.99:463,48,0	1/1:2,20:22:57.09:550,57,0	1/1:2,20:22:60.09:579,60,0	0/0:20,0:20:48.13:0,48,565	0/0:28,0:28:72.21:0,72,860	0/0:18,0:18:51.14:0,51,604	1/1:0,19:19:54.09:521,54,0	1/1:2,25:27:69:666,69,0	1/1:2,17:19:39.06:377,39,0	0/0:17,0:17:51.16:0,51,616	0/0:26,0:26:75.22:0,75,888	0/0:33,1:34:58.29:0,58,985	0/0:10,0:10:27.05:0,27,301
chr10	56300200	.	T	TAAC	1493.87	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-7.827;DP=558;FS=19.187;HRun=0;HaplotypeScore=75.8903;InbreedingCoeff=0.9952;MQ=79.12;MQ0=0;MQRankSum=-4.461;QD=45.27;ReadPosRankSum=-3.033;VQSLOD=2.7887;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,117,1817	1/1:1,7:8:18.06:392,18,0	0/0:21,0:20:51.12:0,51,758	0/0:18,0:17:42.13:0,42,606	0/0:28,0:28:81.24:0,81,1213	0/0:25,0:25:69.22:0,69,1072	0/0:20,0:20:48.15:0,48,731	1/1:4,20:24:57.20:1222,57,0	0/0:19,0:19:45.15:0,45,713	0/0:29,0:29:81.26:0,81,1243	0/0:21,0:21:63.20:0,63,975	0/0:14,0:14:42.14:0,42,666	0/0:17,0:17:48.16:0,48,761	0/0:11,0:11:33.11:0,33,518	0/0:19,0:19:54.18:0,54,850	0/0:14,0:14:39.13:0,39,618	0/0:28,0:28:81.23:0,81,1235	0/0:17,0:17:51.17:0,51,804	0/0:22,0:22:57.19:0,57,875	0/0:19,0:19:51.17:0,51,808	0/0:16,0:16:42.12:0,42,638	0/0:11,0:11:30.10:0,30,476	0/0:17,0:17:48.16:0,48,761	0/0:13,0:13:36.12:0,36,567	0/0:15,0:15:45.15:0,45,713	0/0:23,0:23:57.19:0,57,904	0/0:31,0:31:84.24:0,84,1280	0/0:16,0:16:42.13:0,42,642
chr10	56303972	.	CATAT	C	4895.58	PASS	AB=0.929;AC=28;AF=0.519;AN=54;BaseQRankSum=4.054;DP=249;FS=0.780;HRun=0;HaplotypeScore=53.1002;InbreedingCoeff=0.6988;MQ=73.14;MQ0=2;MQRankSum=-4.644;QD=30.98;ReadPosRankSum=-0.965;VQSLOD=3.7768;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:9:14.18:0,14,248	1/1:1,1:2:3.01:51,3,0	0/1:9,0:8:0.07:16,0,0	0/0:24,0:7:2.92:0,3,17	0/0:5,0:7:14.52:0,15,249	0/0:5,0:7:15.05:0,15,330	0/0:6,0:6:9.03:0,9,174	1/1:4,21:26:63.20:1011,63,0	1/1:2,6:7:18.06:303,18,0	1/1:0,7:7:21.05:328,21,0	1/1:2,10:12:24.08:402,24,0	0/0:3,0:3:6.02:0,6,149	0/0:4,0:4:9.03:0,9,224	0/0:2,0:2:3.01:0,3,75	1/1:0,3:3:9.03:150,9,0	0/0:3,0:3:3.01:0,3,75	0/0:16,0:17:32.82:0,33,744	0/1:10,1:12:26.81:27,0,364	1/1:3,11:13:30.07:452,30,0	1/1:5,6:11:15.05:253,15,0	1/1:2,2:4:6.02:101,6,0	0/0:5,0:6:11.78:0,12,214	0/0:1,0:2:5.75:0,6,87	./.	1/1:3,12:19:48.08:708,48,0	1/1:2,3:6:15.04:229,15,0	1/1:6,9:15:27.09:455,27,0	1/1:0,7:9:27.08:410,27,0
chr10	56304021	.	CATATATAT	C	1413.75	PASS	AB=1.000;AC=17;AF=0.567;AN=30;BaseQRankSum=-0.139;DP=261;FS=5.783;HRun=0;HaplotypeScore=68.2864;InbreedingCoeff=0.6716;MQ=74.59;MQ0=12;MQRankSum=-2.102;QD=25.25;ReadPosRankSum=3.695;VQSLOD=2.2792;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:4,0:3:0:0,0,0	./.	0/0:55,0:17:7.85:0,8,62	0/0:77,0:21:9.57:0,10,64	./.	./.	./.	0/0:18,0:23:45.11:0,45,1160	1/1:1,4:5:9.03:232,9,0	./.	1/1:3,2:5:6.02:154,6,0	./.	./.	0/0:1,0:2:3.01:0,3,105	./.	./.	0/0:7,0:18:9.03:0,9,238	0/0:10,0:12:9.03:0,9,316	1/1:6,0:6:6.02:124,6,0	1/1:1,2:3:6.02:133,6,0	./.	./.	./.	./.	1/1:8,1:10:6.02:113,6,0	1/1:2,1:3:3.01:77,3,0	1/1:6,4:11:15.05:365,15,0	1/1:3,3:8:15.05:343,15,0
chr10	56305404	.	AC	A	2574.21	PASS	AB=1.000;AC=30;AF=0.536;AN=56;BaseQRankSum=4.226;DP=525;FS=4.562;HRun=8;HaplotypeScore=71.4183;InbreedingCoeff=0.5985;MQ=54.79;MQ0=43;MQRankSum=-4.994;QD=9.46;ReadPosRankSum=-1.432;VQSLOD=1.7382;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:43:97.53:0,98,1072	0/0:4,0:4:3.92:0,4,15	0/0:52,0:8:17.17:0,17,131	0/0:37,1:6:2.91:0,3,17	0/0:20,0:20:36.23:0,36,421	0/0:9,0:8:4.08:0,4,29	0/0:28,0:28:1.79:0,2,86	1/1:19,1:19:11.44:149,11,0	1/1:8,1:7:17.63:125,18,0	1/1:11,3:10:22.22:192,22,0	1/1:6,7:12:28.69:277,29,0	1/1:12,0:10:9.51:46,10,0	0/0:11,0:10:15.05:0,15,177	0/0:13,0:13:32.95:0,33,360	1/1:8,6:14:19.48:236,19,0	0/1:13,0:13:13.89:21,0,14	0/1:35,0:33:16.47:16,0,51	0/1:27,0:26:5.64:6,0,44	1/1:4,11:14:12.71:319,13,0	1/1:3,3:5:11.97:105,12,0	1/1:7,9:15:33.03:309,33,0	0/0:16,0:14:5.58:0,6,66	0/0:14,0:13:13.44:0,13,82	0/1:26,0:24:9.38:9,0,44	1/1:4,10:14:38.94:351,39,0	1/1:5,5:10:29.64:239,30,0	1/1:12,2:13:30.01:239,30,0	1/1:11,2:9:17:135,17,0
chr10	56305412	.	CA	C	2341.73	PASS	AB=0.924;AC=26;AF=0.464;AN=56;BaseQRankSum=0.321;DP=599;FS=3.277;HRun=11;HaplotypeScore=82.4539;InbreedingCoeff=0.1873;MQ=53.13;MQ0=83;MQRankSum=-1.844;QD=6.91;ReadPosRankSum=5.078;VQSLOD=2.1748;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:48:53.65:0,54,973	0/0:4,0:4:8.99:0,9,83	0/0:62,2:8:16.47:0,16,115	0/0:50,0:9:9.69:0,10,44	0/0:21,1:20:26.51:0,27,445	1/1:5,9:11:8:92,8,0	0/1:8,15:21:23.18:231,0,23	0/0:19,0:15:17.61:0,18,207	0/1:9,0:7:8.78:22,0,9	0/0:22,0:18:23.48:0,23,202	0/1:12,0:11:29.06:29,0,32	1/1:5,10:12:11.94:93,12,0	0/0:16,0:11:17.96:0,18,161	0/0:11,1:12:30.04:0,30,306	0/1:15,0:12:29.60:59,0,30	1/1:9,8:12:22.44:168,22,0	1/1:13,23:34:89.24:693,89,0	1/1:8,19:25:37.82:286,38,0	0/1:17,0:16:21.34:21,0,33	0/1:10,0:7:8.56:9,0,18	0/1:16,0:14:4.34:35,0,4	0/1:3,11:14:4.48:105,0,4	1/1:6,9:14:9.13:174,9,0	1/1:4,18:21:52.97:423,53,0	0/1:20,0:18:25.63:31,0,26	0/1:12,0:12:31.97:37,0,32	0/1:18,0:16:11.37:11,0,61	0/1:23,0:9:3.63:9,0,4
chr10	56305438	.	AAAAC	A	2116.38	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=11.374;DP=560;FS=4.821;HRun=0;HaplotypeScore=106.3387;InbreedingCoeff=0.9683;MQ=58.61;MQ0=63;MQRankSum=-8.280;QD=10.69;ReadPosRankSum=-1.657;VQSLOD=2.5857;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:52:99:0,138,3123	1/1:1,3:4:9.03:151,9,0	0/0:37,0:11:33.08:0,33,585	0/0:36,0:10:19.77:0,20,293	0/0:27,0:25:66.18:0,66,1487	0/0:16,0:13:24.06:0,24,518	0/0:23,0:21:48.11:0,48,1130	1/1:5,9:9:17.93:190,18,0	1/1:9,1:8:20.63:159,21,0	1/1:15,1:14:33.64:224,34,0	1/1:9,1:9:17.56:134,18,0	0/0:15,0:12:15.05:0,15,337	0/0:17,0:12:24.08:0,24,511	0/0:16,0:16:45.08:0,45,843	1/1:14,1:12:26.53:197,27,0	0/0:16,0:11:30.08:0,30,630	0/0:31,0:31:87.29:0,87,1982	0/0:28,0:26:50.60:0,51,1036	1/1:19,2:20:40.31:337,40,0	1/1:10,1:9:17.72:147,18,0	1/1:16,0:14:14.77:102,15,0	0/0:11,0:11:33.07:0,33,638	0/0:11,0:11:30.07:0,30,616	0/0:23,0:21:54.15:0,54,1098	1/1:18,1:17:17.18:145,17,0	1/1:17,1:17:39.99:279,40,0	1/1:24,0:23:42.71:246,43,0	1/1:20,0:6:7.02:34,7,0
chr10	56305439	.	AAAC	A	3752.54	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=9.744;DP=534;FS=4.710;HRun=0;HaplotypeScore=92.2636;InbreedingCoeff=0.9737;MQ=59.97;MQ0=46;MQRankSum=-8.073;QD=20.28;ReadPosRankSum=-1.603;VQSLOD=3.0646;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:51:99:0,141,2595	1/1:4,0:4:9.02:87,9,0	0/0:34,0:11:33.07:0,33,511	0/0:32,0:10:20.25:0,20,232	0/0:27,0:25:66.17:0,66,1239	0/0:16,0:13:24.05:0,24,436	0/0:24,0:22:50.69:0,51,946	1/1:13,0:8:17.92:144,18,0	1/1:2,6:8:20.95:227,21,0	1/1:6,9:14:36.11:510,36,0	1/1:5,4:9:18.01:233,18,0	0/0:13,0:12:15.04:0,15,274	0/0:16,0:12:24.08:0,24,438	0/0:15,0:15:45.05:0,45,690	1/1:7,8:12:26.83:240,27,0	0/0:16,0:11:30.07:0,30,515	0/0:31,0:31:87.25:0,87,1638	0/0:28,0:26:50.80:0,51,858	1/1:13,7:19:41.13:504,41,0	1/1:4,7:9:18.01:213,18,0	1/1:9,6:14:14.98:163,15,0	0/0:11,0:11:33.04:0,33,521	0/0:11,0:11:30.05:0,30,505	0/0:21,0:21:54.11:0,54,905	1/1:16,3:17:23.75:222,24,0	1/1:6,11:16:42.06:522,42,0	1/1:5,19:23:46.78:570,47,0	1/1:12,3:6:9.02:118,9,0
chr10	56305440	.	AAC	A	2377.99	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=11.314;DP=512;FS=3.941;HRun=0;HaplotypeScore=87.5387;InbreedingCoeff=0.9680;MQ=62.01;MQ0=34;MQRankSum=-7.945;QD=13.67;ReadPosRankSum=-2.286;VQSLOD=2.8856;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:51:99:0,135,2046	1/1:4,0:4:8.93:64,9,0	0/0:31,0:11:32.99:0,33,421	0/0:29,2:11:10.31:0,10,168	0/0:27,0:25:66.15:0,66,991	0/0:15,0:13:24.05:0,24,354	0/0:23,0:22:42.67:0,43,745	1/1:13,0:8:17.87:132,18,0	1/1:8,0:8:20.87:156,21,0	1/1:14,0:13:35.95:301,36,0	1/1:8,0:8:17.93:141,18,0	0/0:13,0:12:15.03:0,15,216	0/0:16,0:12:24.06:0,24,357	0/0:15,0:15:42.65:0,43,549	1/1:14,0:12:26.77:190,27,0	0/0:15,0:11:29.87:0,30,405	0/0:31,0:31:86.91:0,87,1276	0/0:27,0:26:50.16:0,50,672	1/1:19,1:19:41.67:358,42,0	1/1:11,0:9:17.95:144,18,0	1/1:15,0:14:14.96:120,15,0	0/0:11,0:11:33.04:0,33,435	0/0:11,0:11:30.04:0,30,405	0/0:19,0:19:53.46:0,53,714	1/1:12,5:16:23.93:218,24,0	1/1:17,0:16:41.92:346,42,0	1/1:24,0:23:46.64:360,47,0	1/1:9,0:5:8.99:76,9,0
chr10	56308626	.	ATGTGTG	A	740.08	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=-1.631;DP=587;FS=5.290;HRun=0;HaplotypeScore=149.0838;InbreedingCoeff=0.6253;MQ=56.14;MQ0=8;MQRankSum=0.654;QD=6.44;ReadPosRankSum=1.032;VQSLOD=2.5089;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:33:69.58:0,70,1523	0/0:9,0:9:14.85:0,15,344	0/0:14,0:8:2.98:0,3,22	0/0:13,0:9:6.02:0,6,119	0/0:20,0:20:24.55:0,25,608	0/0:6,15:21:0:0,0,0	1/1:5,11:15:2.99:25,3,0	0/0:29,0:29:45.57:0,46,812	0/0:21,0:21:48.11:0,48,974	0/0:24,0:24:45:0,45,925	0/0:20,0:20:23.90:0,24,427	1/1:15,1:16:32.99:573,33,0	0/0:17,0:17:42.05:0,42,835	0/0:14,0:14:12.04:0,12,283	0/0:24,0:24:40.03:0,40,775	1/1:10,9:19:5.38:63,5,0	1/1:8,0:18:8.62:117,9,0	0/1:19,0:18:98.85:99,0,117	0/0:30,0:28:44.58:0,45,691	0/0:25,0:24:27.09:0,27,630	0/0:28,0:27:33.57:0,34,775	0/0:32,0:32:0.94:0,1,1	0/0:16,0:15:0:0,0,1	1/1:26,0:26:0.13:5,0,0	0/0:25,0:25:26.80:0,27,762	0/0:22,0:21:41.95:0,42,848	0/0:23,0:23:22.48:0,22,665	0/0:11,0:11:24.08:0,24,575
chr10	56308645	.	TGTGTGTGAGA	T	836.34	PASS	AB=0.963;AC=13;AF=0.232;AN=56;BaseQRankSum=2.699;DP=547;FS=51.891;HRun=0;HaplotypeScore=173.3836;InbreedingCoeff=-0.0837;MQ=50.15;MQ0=4;MQRankSum=0.374;QD=3.29;ReadPosRankSum=-2.003;VQSLOD=0.9917;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:42:61.96:0,62,2046	0/0:8,0:8:14.91:0,15,344	0/0:2,0:1:2.98:0,3,22	0/0:3,0:2:6.02:0,6,119	0/0:16,0:16:28.50:0,29,778	0/1:18,0:18:29.60:30,0,41	0/1:21,0:18:41.85:42,0,214	0/0:20,0:20:54.40:0,54,866	0/0:23,0:23:19.98:0,20,996	0/1:21,0:21:2.55:3,0,866	0/1:19,0:19:34.73:35,0,369	1/1:16,0:17:11.82:562,12,0	0/0:24,0:24:55.03:0,55,1191	0/0:14,0:14:26.27:0,26,495	0/1:26,0:26:5.43:5,0,773	0/1:15,0:15:38.54:50,0,39	0/1:17,0:16:92.69:93,0,130	0/1:19,0:18:65.23:65,0,598	0/0:19,0:19:13.36:0,13,664	0/0:21,0:20:27.09:0,27,654	0/1:34,0:33:36.06:36,0,731	0/0:7,24:31:0.94:0,1,3	0/0:7,11:17:0.94:0,1,2	0/1:8,0:25:14.97:21,0,15	0/0:22,0:22:24.30:0,24,862	0/0:18,0:17:20.22:0,20,844	0/1:22,0:22:44.44:44,0,695	0/0:11,0:11:24.08:0,24,624
chr10	56310581	.	T	TCA	2443.58	PASS	AB=0.704;AC=14;AF=0.250;AN=56;BaseQRankSum=-6.087;DP=887;FS=8.245;HRun=0;HaplotypeScore=144.5894;InbreedingCoeff=0.3170;MQ=60.23;MQ0=20;MQRankSum=-1.101;QD=7.54;ReadPosRankSum=-3.027;VQSLOD=2.2569;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:46:65.60:0,66,628	0/0:10,0:10:15.03:0,15,159	1/1:73,0:29:0.47:1,0,0	0/0:76,0:23:3:0,3,31	0/0:19,0:25:35.68:0,36,375	0/1:11,7:19:93.97:110,0,94	0/1:18,17:36:60.91:557,0,61	0/0:33,0:33:24.23:0,24,232	0/0:28,0:28:59.45:0,59,564	0/0:27,0:27:45.06:0,45,470	0/0:18,0:17:23.56:0,24,270	0/1:16,17:34:31.17:420,0,31	0/0:13,0:20:9.14:0,9,251	0/0:29,0:36:62.49:0,62,615	0/0:28,0:28:59.79:0,60,605	1/1:7,1:23:10.45:149,10,0	1/1:10,1:22:10.23:77,10,0	1/1:13,0:26:8.92:70,9,0	0/0:27,0:26:24.28:0,24,238	0/0:17,0:17:20.80:0,21,294	0/0:78,0:78:99:0,172,1740	0/1:13,8:21:43.20:250,0,43	0/1:15,5:20:7.80:263,0,8	0/1:22,26:48:99:707,0,106	0/0:23,0:23:45.12:0,45,496	0/0:38,0:38:71.69:0,72,742	0/0:23,0:23:24.06:0,24,269	0/0:10,0:10:23.89:0,24,239
chr10	56312041	.	G	GCCCTGC	297.94	PASS	AB=1.000;AC=18;AF=0.563;AN=32;BaseQRankSum=-0.317;DP=185;FS=7.091;HRun=0;HaplotypeScore=44.3260;InbreedingCoeff=0.4987;MQ=93.05;MQ0=3;MQRankSum=-2.539;QD=3.82;ReadPosRankSum=-1.865;VQSLOD=-0.4824;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:8.53:0,9,181	./.	./.	./.	./.	0/1:8,0:8:0:0,0,0	1/1:13,0:13:9:98,9,0	1/1:11,0:10:6.01:67,6,0	1/1:4,0:4:3.01:59,3,0	1/1:6,0:6:0.47:1,0,0	./.	1/1:2,3:6:3.01:96,3,0	0/0:4,0:4:3.01:0,3,61	0/0:8,0:8:9.02:0,9,147	1/1:4,0:4:3:25,3,0	0/0:1,0:1:3.01:0,3,61	0/0:15,0:15:29.56:0,30,532	0/0:12,0:12:9.03:0,9,182	./.	./.	0/1:15,0:14:0:0,0,0	./.	1/1:2,0:2:0.89:2,1,0	1/1:5,3:9:3.01:60,3,0	./.	./.	./.	./.
chr10	56314542	.	T	TACAC	3064.17	PASS	AB=1.000;AC=42;AF=0.808;AN=52;BaseQRankSum=0.536;DP=265;FS=1.618;HRun=0;HaplotypeScore=56.2137;InbreedingCoeff=0.4976;MQ=56.39;MQ0=13;MQRankSum=-2.046;QD=14.73;ReadPosRankSum=-0.173;VQSLOD=3.1169;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:14:8.99:0,9,97	0/0:4,0:4:2.90:0,3,16	./.	./.	0/1:2,0:3:0:0,0,0	1/1:7,5:16:19.81:262,20,0	1/1:3,1:7:2.74:12,3,0	1/1:20,0:20:1.82:5,2,0	1/1:3,0:3:6.01:74,6,0	1/1:8,0:11:18.05:289,18,0	1/1:5,0:5:3.01:38,3,0	1/1:1,1:3:3.01:71,3,0	0/0:5,0:5:9.01:0,9,119	0/0:3,0:3:3.01:0,3,47	1/1:5,0:10:6.02:90,6,0	1/1:4,0:7:15.05:261,15,0	1/1:5,10:15:11.78:226,12,0	1/1:6,10:16:21.07:497,21,0	1/1:11,0:14:15.05:269,15,0	1/1:6,0:7:6.02:103,6,0	0/1:9,0:8:0:0,0,0	1/1:2,0:2:3.01:71,3,0	1/1:3,4:7:5.76:141,6,0	1/1:4,6:10:6.02:142,6,0	1/1:1,0:2:6.02:91,6,0	1/1:14,0:12:9.03:157,9,0	1/1:5,0:5:8.95:97,9,0	1/1:11,2:14:15.94:299,16,0
chr10	56321577	.	CG	C	14745.86	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=9.539;DP=667;FS=0.000;HRun=5;HaplotypeScore=68.5814;InbreedingCoeff=0.9980;MQ=88.55;MQ0=0;MQRankSum=-6.874;QD=30.28;ReadPosRankSum=1.294;VQSLOD=5.3852;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,160,2172	1/1:1,17:18:45.13:510,45,0	0/0:26,0:26:66:0,66,831	0/0:25,0:25:60.20:0,60,812	0/0:25,0:25:66.21:0,66,884	1/1:1,23:24:66.19:748,66,0	1/1:1,29:30:84.24:953,84,0	1/1:3,22:25:66.19:748,66,0	1/1:3,29:32:84.24:953,84,0	1/1:2,28:30:84.24:952,84,0	1/1:0,12:12:27.08:306,27,0	1/1:1,18:19:51.14:578,51,0	0/0:25,0:25:69.21:0,69,926	0/0:25,0:25:69.23:0,69,943	1/1:2,23:25:69.19:782,69,0	1/1:4,21:25:59.91:658,60,0	1/1:1,22:23:63.18:715,63,0	1/1:0,18:18:54.15:612,54,0	1/1:1,20:21:60.14:667,60,0	1/1:0,18:18:51.11:565,51,0	1/1:3,40:43:99:1225,108,0	1/1:0,17:17:45.13:510,45,0	1/1:1,20:21:57.14:646,57,0	1/1:2,24:26:63.18:714,63,0	1/1:0,12:12:30.09:340,30,0	1/1:0,23:23:66.19:748,66,0	1/1:0,19:19:54.15:612,54,0	1/1:0,6:6:18.05:204,18,0
chr10	56321695	.	GCTC	G	10837.43	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=14.114;DP=627;FS=18.291;HRun=0;HaplotypeScore=96.3511;InbreedingCoeff=0.9929;MQ=84.80;MQ0=0;MQRankSum=-6.957;QD=40.44;ReadPosRankSum=0.369;VQSLOD=4.8580;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:93.32:0,93,2077	1/1:1,10:11:21.07:343,21,0	0/0:26,0:26:69.24:0,69,1485	0/0:18,0:18:48.16:0,48,1048	0/0:15,0:15:45.15:0,45,1003	0/0:15,0:15:42.13:0,42,876	0/0:26,0:26:69.24:0,69,1541	1/1:3,20:23:60.17:949,60,0	1/1:2,24:26:66.23:1077,66,0	1/1:1,19:19:54.18:881,54,0	1/1:3,5:8:15.05:244,15,0	0/0:17,0:17:51.18:0,51,1121	0/0:30,0:30:75.26:0,75,1672	0/0:31,0:31:84.16:0,84,1817	1/1:2,21:23:63.21:1022,63,0	0/0:23,0:23:63.22:0,63,1379	0/0:33,0:33:93.30:0,93,2009	0/0:34,0:34:96.33:0,96,2145	1/1:1,14:15:42.13:662,42,0	1/1:1,13:14:36.12:574,36,0	1/1:1,55:56:99:2215,138,0	0/0:14,0:14:42.14:0,42,898	0/0:13,0:13:33.11:0,33,735	0/0:28,0:28:75.24:0,75,1631	1/1:3,15:18:42.14:660,42,0	1/1:1,28:27:78.24:1242,78,0	1/1:1,17:18:48.16:771,48,0	1/1:0,7:7:11.99:196,12,0
chr10	56322092	.	ACCC	A	3135.48	PASS	AB=0.709;AC=10;AF=0.179;AN=56;BaseQRankSum=12.716;DP=572;FS=1.580;HRun=4;HaplotypeScore=115.3087;InbreedingCoeff=-0.2234;MQ=42.75;MQ0=67;MQRankSum=-11.466;QD=15.37;ReadPosRankSum=-0.536;VQSLOD=-0.3285;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:22:54.18:0,54,1179	0/0:8,0:7:21.07:0,21,490	0/1:36,0:4:20.06:20,0,76	0/0:34,0:2:6.02:0,6,129	0/0:17,0:13:30.10:0,30,708	0/1:7,5:10:99:223,0,257	0/1:13,8:16:99:276,0,588	0/0:22,0:9:27.09:0,27,579	0/0:17,0:14:38.95:0,39,920	0/0:27,0:23:66.23:0,66,1495	0/0:10,0:8:18.06:0,18,419	0/1:7,18:23:99:830,0,217	0/0:21,0:14:42.14:0,42,991	0/0:32,0:25:66.21:0,66,1481	0/0:14,0:12:36.08:0,36,751	0/1:11,10:18:99:493,0,239	0/1:12,9:15:99:360,0,247	0/1:9,7:11:99:208,0,228	0/0:23,0:10:30.10:0,30,599	0/0:9,0:8:21.07:0,21,489	0/0:35,0:32:81.28:0,81,1880	0/1:7,13:20:99:438,0,448	0/1:7,9:13:99:352,0,155	0/1:11,5:14:80.55:81,0,215	0/0:20,0:17:48.16:0,48,1115	0/0:17,0:11:33.10:0,33,718	0/0:16,0:12:30.10:0,30,684	0/0:17,0:15:36.12:0,36,844
chr10	56322099	.	GA	G	2158	PASS	AB=0.673;AC=9;AF=0.161;AN=56;BaseQRankSum=12.283;DP=591;FS=4.187;HRun=1;HaplotypeScore=114.1892;InbreedingCoeff=-0.1953;MQ=45.18;MQ0=53;MQRankSum=-10.562;QD=12.19;ReadPosRankSum=-0.516;VQSLOD=2.0804;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:25:66.21:0,66,1025	0/0:8,0:7:21.07:0,21,312	0/0:33,0:5:12.02:0,12,176	0/0:33,0:5:12:0,12,158	0/0:17,0:13:30.10:0,30,479	0/1:7,6:11:99:173,0,162	0/1:13,10:17:99:207,0,380	0/0:27,0:14:42.13:0,42,598	0/0:15,0:14:39.13:0,39,582	0/0:28,0:27:78.25:0,78,1123	0/0:10,0:8:18:0,18,264	0/1:10,18:26:99:587,0,119	0/0:20,0:16:48.14:0,48,718	0/0:30,0:27:75.26:0,75,1198	0/0:15,0:13:39.09:0,39,542	0/1:7,12:18:99:330,0,147	0/1:12,9:16:99:242,0,155	0/1:11,7:13:99:176,0,154	0/0:23,0:13:39.13:0,39,581	0/0:9,0:8:21.07:0,21,314	0/0:42,0:39:99:0,105,1464	0/1:8,13:21:99:291,0,319	0/1:6,9:13:99:244,0,109	0/1:14,5:17:49.85:50,0,174	0/0:20,0:17:48.16:0,48,722	0/0:17,0:14:42.12:0,42,603	0/0:18,0:14:36.09:0,36,500	0/0:18,0:16:39.13:0,39,569
chr10	56322898	.	G	GA	1896.82	PASS	AB=0.687;AC=14;AF=0.250;AN=56;BaseQRankSum=-4.953;DP=560;FS=0.966;HRun=11;HaplotypeScore=70.7965;InbreedingCoeff=0.5268;MQ=56.10;MQ0=9;MQRankSum=0.071;QD=10.78;ReadPosRankSum=0.788;VQSLOD=3.1037;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,1:40:54.95:0,55,585	0/0:6,0:6:14.61:0,15,114	0/0:8,0:6:5.92:0,6,46	0/0:5,0:5:5.49:0,5,43	0/0:30,1:31:13.43:0,13,276	1/1:3,10:13:0.82:189,1,0	1/1:9,12:20:10.80:320,11,0	0/0:30,0:31:70.25:0,70,524	0/0:24,0:24:13.48:0,13,276	0/0:21,1:23:3.38:0,3,190	0/0:17,0:18:43.70:0,44,321	0/1:11,8:19:19.57:160,0,20	0/0:9,0:9:14.59:0,15,104	0/0:14,0:13:23.82:0,24,181	0/0:18,0:17:38.80:0,39,300	0/1:12,4:15:5.27:120,0,5	1/1:2,34:36:39.43:557,39,0	1/1:8,12:19:26.33:257,26,0	0/0:20,0:18:40.86:0,41,308	0/0:25,4:28:23.27:0,23,363	0/0:27,0:27:56.33:0,56,438	0/1:5,7:13:22.42:157,0,22	0/1:6,9:15:8.42:107,0,8	1/1:6,13:21:16.14:203,16,0	0/0:23,0:23:47.42:0,47,352	0/0:26,0:27:30.08:0,30,218	0/0:24,0:23:30.80:0,31,369	0/0:5,0:5:11.93:0,12,93
chr10	56323532	.	TGCGCGC	T	2674.21	PASS	AB=0.917;AC=38;AF=0.679;AN=56;BaseQRankSum=7.774;DP=480;FS=1.638;HRun=0;HaplotypeScore=140.1944;InbreedingCoeff=0.4977;MQ=64.01;MQ0=8;MQRankSum=-6.134;QD=6.98;ReadPosRankSum=1.386;VQSLOD=2.8078;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:48.10:0,48,1071	0/0:3,0:5:0.47:0,0,1	0/0:13,0:12:1.25:0,1,3	0/0:11,0:10:0:0,0,0	0/0:13,0:13:20.90:0,21,485	1/1:17,0:17:6.02:86,6,0	1/1:20,0:20:3.01:43,3,0	1/1:9,0:16:19.28:273,19,0	1/1:5,4:20:21:108,21,0	1/1:8,7:14:24.06:395,24,0	1/1:3,3:11:5.97:46,6,0	1/1:24,0:23:13.43:171,13,0	0/0:13,0:13:18:0,18,330	0/0:13,0:12:15.04:0,15,273	1/1:1,5:17:3.27:15,3,0	1/1:17,0:17:3.48:44,3,0	0/1:17,0:17:0:0,0,0	1/1:19,0:18:6.02:86,6,0	1/1:12,1:16:23.93:360,24,0	1/1:4,4:17:11.69:113,12,0	0/1:17,17:34:52.01:52,0,84	1/1:12,0:12:2.68:50,3,0	0/1:13,0:13:0:0,0,0	1/1:32,0:31:5.95:86,6,0	1/1:4,5:17:11.03:51,11,0	1/1:8,4:13:22.78:343,23,0	1/1:8,5:19:17.50:217,17,0	0/1:13,0:12:15.74:293,0,16
chr10	56323539	.	GCGCGCGCGCA	G	2569.43	PASS	AB=1.000;AC=27;AF=0.482;AN=56;BaseQRankSum=2.309;DP=455;FS=8.877;HRun=0;HaplotypeScore=152.1815;InbreedingCoeff=0.2221;MQ=55.24;MQ0=10;MQRankSum=-2.963;QD=8.24;ReadPosRankSum=3.124;VQSLOD=1.7662;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:63.17:0,63,1927	0/0:4,0:4:0.47:0,0,1	0/0:5,0:5:0:0,0,0	0/0:4,0:3:2.98:0,3,21	0/0:10,0:10:24.08:0,24,851	1/1:2,17:18:6.02:201,6,0	1/1:5,16:19:3.48:101,3,0	1/1:15,0:14:21.04:417,21,0	0/0:23,0:23:42.08:0,42,600	0/1:16,0:15:99:220,0,215	0/0:10,0:10:2.78:0,3,50	1/1:6,18:24:17.30:461,17,0	0/0:11,0:11:18.53:0,19,548	0/0:11,0:10:21.06:0,21,494	0/0:19,0:19:2.19:0,2,46	1/1:2,13:14:3.48:102,3,0	1/1:4,15:19:3.48:33,3,0	1/1:2,16:17:8.99:222,9,0	0/1:15,0:14:99:176,0,130	0/1:16,0:16:36.05:36,0,36	0/1:38,0:38:19.22:19,0,283	1/1:2,6:9:2.69:88,3,0	1/1:1,10:11:3.48:41,3,0	1/1:5,25:29:6.01:203,6,0	0/0:17,0:17:15.04:0,15,232	0/1:14,0:13:99:169,0,271	0/1:16,0:16:97.31:97,0,179	0/1:15,0:14:99:153,0,215
chr10	56323558	.	C	CAT	921.89	PASS	AB=0.974;AC=11;AF=0.212;AN=52;BaseQRankSum=3.018;DP=488;FS=8.230;HRun=0;HaplotypeScore=151.4083;InbreedingCoeff=0.1346;MQ=45.83;MQ0=12;MQRankSum=0.968;QD=5.09;ReadPosRankSum=-0.438;VQSLOD=2.5042;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:59.97:0,60,615	0/0:8,0:7:2.77:0,3,20	./.	./.	0/0:10,0:10:27.01:0,27,299	0/0:18,0:17:9.01:0,9,85	0/0:21,0:19:6:0,6,54	0/0:18,0:16:39.23:0,39,239	0/1:22,0:22:42.51:118,0,43	1/1:15,0:14:33:309,33,0	0/1:16,0:16:21.42:26,0,21	0/0:26,0:26:17.77:0,18,178	0/0:8,0:8:17.77:0,18,180	0/0:18,0:17:29.62:0,30,292	0/0:21,0:21:8.41:0,8,46	0/0:15,0:14:6:0,6,54	0/0:22,0:21:17.78:0,18,127	0/0:18,0:17:9.01:0,9,89	0/1:19,0:17:28.24:119,0,28	1/1:19,0:19:5.97:71,6,0	0/1:45,3:48:10.53:108,0,11	0/0:7,0:7:2.74:0,3,16	0/0:13,0:13:2.73:0,3,23	0/0:30,0:29:17.81:0,18,148	0/0:19,0:19:24.08:0,24,112	0/1:15,0:14:49.32:105,0,49	0/1:20,0:20:22.97:160,0,23	0/1:6,1:6:1.29:51,0,1
chr10	56323568	.	C	CAT	2170.62	PASS	AB=0.980;AC=19;AF=0.352;AN=54;BaseQRankSum=4.711;DP=523;FS=2.968;HRun=0;HaplotypeScore=142.0953;InbreedingCoeff=0.7195;MQ=45.77;MQ0=18;MQRankSum=-2.347;QD=9.73;ReadPosRankSum=2.576;VQSLOD=3.3002;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:62.97:0,63,639	0/0:7,0:6:2.77:0,3,20	./.	0/0:16,0:4:8.82:0,9,64	0/0:11,0:11:26.96:0,27,298	0/0:18,0:17:9.01:0,9,86	0/0:23,0:21:12.35:0,12,146	0/0:18,0:17:44.16:0,44,313	1/1:26,0:26:31.58:498,32,0	1/1:13,0:12:17.53:316,18,0	1/1:18,0:18:19.81:183,20,0	0/0:28,0:28:24.21:0,24,225	0/0:9,0:9:20.71:0,21,198	0/0:17,0:16:32.87:0,33,311	1/1:21,0:21:11.60:94,12,0	0/0:13,0:12:9:0,9,81	0/0:26,0:25:26.76:0,27,199	0/0:23,0:21:20.94:0,21,188	0/1:15,0:13:2.02:111,0,2	0/1:20,0:20:14.64:19,0,15	0/1:43,3:46:6.82:239,0,7	0/0:9,0:9:5.74:0,6,42	0/0:13,0:13:14.92:0,15,114	0/0:33,0:32:29.80:0,30,246	1/1:20,0:19:13.42:143,13,0	1/1:19,0:18:40.07:331,40,0	1/1:19,0:19:37.21:270,37,0	1/1:5,1:6:16.24:165,16,0
chr10	56325079	.	GCA	G	4482.48	PASS	AB=0.931;AC=21;AF=0.375;AN=56;BaseQRankSum=-4.181;DP=706;FS=2.340;HRun=0;HaplotypeScore=143.9800;InbreedingCoeff=0.7692;MQ=56.29;MQ0=12;MQRankSum=4.882;QD=15.56;ReadPosRankSum=5.207;VQSLOD=5.0045;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:27,2:30:35.16:35,0,745	0/0:2,0:9:14.94:0,15,123	0/0:44,0:22:26.90:0,27,315	0/0:32,0:24:29.29:0,29,381	0/0:22,2:24:24.20:0,24,851	1/1:5,11:16:15.05:180,15,0	1/1:10,17:27:30.09:360,30,0	0/0:20,0:36:46.86:0,47,483	0/0:7,0:26:23.37:0,23,192	0/0:5,0:24:35.76:0,36,305	0/0:3,0:25:29.72:0,30,244	1/1:5,18:24:33.45:536,33,0	0/1:21,1:22:2.74:3,0,664	0/1:16,2:18:29.83:30,0,507	0/0:5,0:19:11.72:0,12,105	1/1:5,15:18:33.10:396,33,0	1/1:4,23:28:55.31:756,55,0	1/1:4,17:22:10.03:505,10,0	0/0:8,0:19:35.33:0,35,260	0/0:4,0:19:11.74:0,12,91	0/0:23,0:24:14.69:0,15,104	1/1:5,23:29:57.07:683,57,0	1/1:2,18:21:38.78:424,39,0	1/1:7,23:29:48.06:575,48,0	0/0:5,0:23:15:0,15,131	0/0:7,0:28:56.95:0,57,387	0/0:7,0:38:36.43:0,36,308	0/0:5,0:24:20.79:0,21,164
chr10	56325773	.	AG	A	1051.18	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.626;DP=504;FS=3.605;HRun=2;HaplotypeScore=48.7134;InbreedingCoeff=0.8199;MQ=48.21;MQ0=25;MQRankSum=-6.317;QD=30.03;ReadPosRankSum=-2.440;VQSLOD=2.4572;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:63.21:0,63,933	1/1:0,4:4:12.04:155,12,0	0/0:2,0:1:3:0,3,26	0/0:4,0:1:3:0,3,26	0/0:18,0:17:36.12:0,36,539	0/0:28,0:27:72.22:0,72,1028	0/0:24,0:21:57.15:0,57,827	1/1:4,27:29:78.25:1012,78,0	0/0:23,0:22:45.11:0,45,614	0/0:29,0:27:78.26:0,78,1151	0/0:11,0:11:15.05:0,15,225	0/0:15,0:13:27.09:0,27,399	0/0:14,0:14:42.13:0,42,601	0/0:14,0:14:24.08:0,24,359	0/0:20,0:20:54.17:0,54,789	0/0:11,0:11:24.07:0,24,340	0/0:24,0:24:39.13:0,39,584	0/0:25,0:19:51.17:0,51,764	0/0:14,0:12:36.12:0,36,539	0/0:17,0:15:42.14:0,42,622	0/0:24,0:22:30.03:0,30,449	0/0:15,0:15:33.10:0,33,474	0/0:15,0:15:42.14:0,42,620	0/0:27,0:27:45.07:0,45,620	0/0:17,0:15:39.13:0,39,584	0/0:20,0:19:57.19:0,57,852	0/0:19,0:19:45.14:0,45,649	0/0:10,0:10:30.10:0,30,450
chr10	56326697	.	T	TA	6866.66	PASS	AB=0.620;AC=42;AF=0.750;AN=56;BaseQRankSum=-8.035;DP=434;FS=6.324;HRun=11;HaplotypeScore=43.5024;InbreedingCoeff=0.7335;MQ=83.10;MQ0=0;MQRankSum=-1.494;QD=20.44;ReadPosRankSum=-0.227;VQSLOD=5.5487;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,1:24:40.92:0,41,402	1/1:0,1:8:14.36:82,14,0	0/0:18,0:17:19.52:0,20,153	0/0:13,0:13:7.20:0,7,105	0/0:21,0:21:50.79:0,51,392	1/1:3,16:19:48.10:487,48,0	1/1:2,7:9:18.04:183,18,0	1/1:7,1:23:46.15:277,46,0	0/1:5,7:12:25.35:131,0,25	1/1:6,18:25:36.85:535,37,0	1/1:4,16:21:50.94:501,51,0	1/1:4,13:17:15.89:342,16,0	0/0:12,0:12:29.88:0,30,232	0/0:10,0:10:17.91:0,18,139	1/1:0,10:10:27.05:274,27,0	1/1:0,10:10:27.05:274,27,0	1/1:2,16:18:39.08:396,39,0	1/1:3,15:18:45.09:457,45,0	1/1:5,17:22:32.41:488,32,0	1/1:5,20:25:60.08:598,60,0	1/1:2,7:9:18.04:183,18,0	1/1:0,4:4:12.02:122,12,0	1/1:6,10:17:10.43:238,10,0	1/1:2,8:10:0.81:190,1,0	1/1:4,11:15:32.90:319,33,0	1/1:8,14:22:19.07:373,19,0	0/1:5,9:14:13.41:234,0,13	1/1:0,8:8:18.04:183,18,0
chr10	56329101	.	CCCCATTACTTAT	C	13734.03	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=16.229;DP=725;FS=2.604;HRun=0;HaplotypeScore=260.1667;InbreedingCoeff=0.9922;MQ=89.67;MQ0=0;MQRankSum=-17.149;QD=71.53;ReadPosRankSum=4.163;VQSLOD=4.4824;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,141,8149	0/0:9,0:9:27.09:0,27,1458	0/0:34,0:34:90.31:0,90,4596	0/0:29,0:29:81.28:0,81,3988	0/0:23,0:23:66.23:0,66,3955	1/1:4,16:20:45.15:1669,45,0	1/1:2,22:24:57.20:2113,57,0	0/0:27,0:27:69.24:0,69,3997	0/0:27,0:27:78.25:0,78,4471	0/0:36,0:36:99:0,108,6184	0/0:18,0:18:54.19:0,54,2879	1/1:3,26:29:57.20:2114,57,0	0/0:23,0:23:63.22:0,63,3546	0/0:31,0:31:93.31:0,93,4921	0/0:28,0:28:81.28:0,81,4724	1/1:7,28:35:84.29:3115,84,0	1/1:3,14:17:32.34:1220,32,0	1/1:3,5:7:12.04:376,12,0	0/0:28,0:28:69.24:0,69,3954	0/0:19,0:19:54.19:0,54,2957	0/0:39,0:39:99:0,114,6575	1/1:1,22:23:44.91:1668,45,0	1/1:3,15:18:26.75:979,27,0	1/1:5,13:17:14.82:481,15,0	0/0:25,0:25:75.26:0,75,4500	0/0:40,0:40:99:0,114,6403	0/0:28,0:28:81.26:0,81,4636	0/0:17,0:17:51.17:0,51,2729
chr10	56337129	.	CAA	C	1948.97	PASS	AB=0.786;AC=39;AF=0.696;AN=56;BaseQRankSum=2.528;DP=319;FS=3.167;HRun=13;HaplotypeScore=54.0155;InbreedingCoeff=0.5240;MQ=55.72;MQ0=19;MQRankSum=-3.135;QD=8.55;ReadPosRankSum=4.063;VQSLOD=0.5195;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:16:26.91:0,27,302	0/0:4,0:4:9:0,9,108	0/0:25,1:5:5.88:0,6,49	0/1:33,0:8:3.96:4,0,57	0/0:13,0:17:40.82:0,41,485	1/1:1,10:12:24.01:233,24,0	1/1:3,3:4:12.02:116,12,0	0/0:19,0:13:27.05:0,27,343	1/1:4,0:5:10.57:45,11,0	1/1:1,0:4:2.66:12,3,0	1/1:8,0:14:6.76:28,7,0	1/1:1,6:7:14.69:145,15,0	0/1:4,1:5:23.08:23,0,35	0/0:6,0:4:11.97:0,12,116	0/1:3,0:3:10.15:10,0,12	1/1:1,5:7:5.96:108,6,0	1/1:9,11:19:37.57:320,38,0	1/1:16,7:21:31.47:303,31,0	1/1:7,0:7:12.59:58,13,0	1/1:6,0:10:15.71:65,16,0	0/1:1,0:6:0.03:34,0,0	1/1:2,2:4:0.81:51,1,0	1/1:3,7:10:25.28:235,25,0	1/1:1,6:7:12.41:117,12,0	1/1:4,0:12:12.75:81,13,0	0/1:6,0:9:1.27:25,0,1	1/1:5,0:8:6.09:57,6,0	1/1:3,0:7:13.72:59,14,0
chr10	56337138	.	A	AT	100.80	PASS	AB=0.858;AC=8;AF=0.143;AN=56;BaseQRankSum=-1.734;DP=299;FS=4.711;HRun=0;HaplotypeScore=57.9460;InbreedingCoeff=-0.1831;MQ=61.34;MQ0=10;MQRankSum=-2.022;QD=1.19;ReadPosRankSum=-2.989;VQSLOD=0.3550;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:14:26.52:0,27,286	0/0:3,0:3:9:0,9,104	0/0:32,0:7:1.61:0,2,65	0/1:31,0:9:7.79:8,0,98	0/0:18,0:18:44.24:0,44,517	0/0:12,0:12:29.51:0,30,190	0/0:5,0:4:11.68:0,12,69	0/0:19,0:16:32.64:0,33,380	0/1:4,3:6:21.19:41,0,21	0/0:3,0:3:2.74:0,3,12	0/0:10,0:9:17.40:0,17,112	0/0:8,0:8:20.72:0,21,145	0/0:4,0:4:5.95:0,6,60	0/0:6,0:5:15.03:0,15,160	0/0:5,0:4:10.78:0,11,70	0/0:6,0:6:14.74:0,15,93	0/0:21,0:20:47.80:0,48,292	0/0:20,0:18:47.35:0,47,333	0/1:6,2:8:48.38:48,0,56	0/1:6,1:7:18.29:18,0,58	0/1:8,0:8:12.31:12,0,21	0/0:3,0:3:8.85:0,9,57	0/0:10,0:10:29.14:0,29,177	0/0:7,0:7:14.76:0,15,98	0/1:8,2:10:40.48:74,0,40	0/1:6,1:7:18.68:19,0,61	0/1:5,2:7:9.76:10,0,39	0/0:6,0:6:13.72:0,14,58
chr10	56337169	.	T	TA	2316.16	PASS	AB=0.833;AC=44;AF=0.786;AN=56;BaseQRankSum=1.706;DP=256;FS=4.678;HRun=12;HaplotypeScore=50.0032;InbreedingCoeff=0.4979;MQ=70.71;MQ0=3;MQRankSum=-3.228;QD=10.48;ReadPosRankSum=-2.337;VQSLOD=2.1404;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:14.81:0,15,105	1/1:2,2:4:6.01:58,6,0	1/1:11,0:9:1.82:6,2,0	0/1:22,0:12:6.02:6,0,38	0/0:13,0:15:39.87:0,40,274	1/1:3,8:11:21.03:204,21,0	0/1:4,2:6:12.51:49,0,13	1/1:10,13:24:16.98:305,17,0	1/1:0,0:5:5.68:28,6,0	0/1:1,0:1:0:0,0,0	1/1:3,1:9:20.11:116,20,0	1/1:7,3:10:14.96:134,15,0	0/0:3,0:3:8.95:0,9,66	0/0:7,0:7:17.90:0,18,131	1/1:2,0:5:14.56:90,15,0	1/1:3,2:5:9.01:83,9,0	1/1:4,18:21:33.05:321,33,0	0/1:5,13:18:20.65:299,0,21	1/1:2,1:8:17.21:100,17,0	1/1:0,1:10:25.96:153,26,0	1/1:2,1:7:11.53:72,12,0	1/1:0,1:1:3:29,3,0	1/1:2,3:6:4.01:57,4,0	1/1:2,2:4:11.99:105,12,0	1/1:3,0:9:17.22:92,17,0	1/1:1,1:7:14.20:71,14,0	1/1:3,3:9:14.37:86,14,0	1/1:4,0:5:2.84:14,3,0
chr10	56337303	.	A	AG	421.52	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=2.291;DP=238;FS=6.274;HRun=0;HaplotypeScore=34.8304;InbreedingCoeff=0.7045;MQ=66.84;MQ0=11;MQRankSum=-0.770;QD=5.47;ReadPosRankSum=2.900;VQSLOD=2.2686;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:34.11:0,34,231	0/0:3,0:3:5.85:0,6,34	0/0:19,0:9:4.68:0,5,127	0/0:10,0:3:4.45:0,4,30	0/0:6,0:5:10.27:0,10,69	1/1:8,2:10:22.27:131,22,0	1/1:9,1:8:20.34:129,20,0	0/0:16,0:15:35.80:0,36,289	0/0:8,0:8:18.36:0,18,137	0/0:6,0:5:8.96:0,9,73	0/0:10,0:9:18.80:0,19,137	1/1:7,0:7:5.66:36,6,0	0/0:3,0:3:2.97:0,3,20	0/0:9,0:9:20.91:0,21,170	0/0:4,0:4:6:0,6,52	1/1:1,1:2:5.95:51,6,0	1/1:11,11:20:10.43:77,10,0	1/1:11,0:10:13.05:82,13,0	0/0:8,0:8:17.93:0,18,139	0/0:9,0:8:15.34:0,15,113	0/0:5,0:5:6.82:0,7,37	1/1:2,0:2:2.96:24,3,0	1/1:4,0:4:8.02:42,8,0	1/1:3,5:7:5.84:33,6,0	0/0:8,0:7:20.82:0,21,167	0/0:4,0:4:7.95:0,8,48	0/0:4,0:4:3.37:0,3,17	0/0:6,0:5:2.90:0,3,17
chr10	56341147	.	ATGTG	A	3057.59	PASS	AB=0.745;AC=31;AF=0.596;AN=52;BaseQRankSum=0.338;DP=628;FS=2.541;HRun=0;HaplotypeScore=120.4028;InbreedingCoeff=0.1995;MQ=59.34;MQ0=20;MQRankSum=-3.819;QD=6.87;ReadPosRankSum=0.278;VQSLOD=2.6498;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:33:29.27:0,29,388	0/0:7,0:6:6.01:0,6,95	./.	./.	0/0:11,1:14:11.58:0,12,176	0/0:18,0:19:11.16:0,11,52	0/1:25,2:31:71.26:71,0,134	0/1:23,0:19:10.96:11,0,90	1/1:15,11:29:36.10:503,36,0	1/1:16,6:21:15.02:189,15,0	1/1:9,6:16:8.99:114,9,0	0/1:8,2:15:75.60:111,0,76	0/0:23,0:23:38.83:0,39,676	0/0:15,0:17:38.60:0,39,797	1/1:7,10:20:33.09:457,33,0	0/1:4,3:18:67.03:109,0,67	0/1:13,5:22:44.81:98,0,45	0/1:15,2:26:59.31:109,0,59	1/1:15,2:16:3.10:89,3,0	1/1:9,3:15:11.99:141,12,0	1/1:26,3:28:15.04:210,15,0	0/1:10,1:17:32.60:38,0,33	0/1:15,3:19:35.11:35,0,48	0/1:26,2:48:57.18:57,0,98	1/1:12,4:16:5.73:93,6,0	1/1:22,5:26:12.49:164,12,0	1/1:9,6:17:27.08:377,27,0	1/1:10,6:17:18.05:261,18,0
chr10	56341383	.	A	AT	1803.54	PASS	AB=0.894;AC=27;AF=0.482;AN=56;BaseQRankSum=-5.889;DP=413;FS=1.059;HRun=3;HaplotypeScore=115.7588;InbreedingCoeff=0.3617;MQ=54.48;MQ0=1;MQRankSum=-1.463;QD=7.05;ReadPosRankSum=-2.845;VQSLOD=-0.3233;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,1:32:15.41:0,15,215	1/1:0,10:11:26.87:293,27,0	0/0:11,0:7:1:0,1,66	0/0:8,0:4:0.26:0,0,3	0/1:12,2:15:32.57:33,0,40	1/1:4,8:12:14.36:175,14,0	1/1:7,4:10:7.89:99,8,0	1/1:16,6:30:8.22:169,8,0	0/1:10,0:10:5.98:6,0,44	0/0:23,0:23:22.77:0,23,59	0/1:15,0:15:5.99:17,0,6	1/1:8,2:10:8.06:78,8,0	0/0:10,0:10:15.99:0,16,66	0/0:11,0:11:0.41:0,0,26	0/0:9,0:9:1.55:0,2,4	0/1:4,7:11:0.53:128,0,1	1/1:10,7:18:6.82:234,7,0	1/1:8,3:10:5.63:106,6,0	0/1:19,0:19:25.42:25,0,33	0/0:16,0:16:16.45:0,16,46	0/0:14,0:14:9.58:0,10,24	1/1:4,6:9:15.43:142,15,0	0/1:12,5:17:0.58:204,0,1	1/1:7,5:12:14.81:177,15,0	1/1:13,0:13:0.93:63,1,0	0/1:29,0:29:27.70:28,0,48	0/0:17,0:16:20.36:0,20,54	0/0:6,0:6:8.82:0,9,27
chr10	56342160	.	A	ATGTG	5735.36	PASS	AB=0.758;AC=20;AF=0.357;AN=56;BaseQRankSum=-0.943;DP=983;FS=38.498;HRun=0;HaplotypeScore=179.9579;InbreedingCoeff=0.6328;MQ=50.75;MQ0=30;MQRankSum=-0.066;QD=15.76;ReadPosRankSum=3.558;VQSLOD=2.8870;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:52:84.59:0,85,1174	0/1:9,0:11:32.52:33,0,38	0/0:50,0:9:3.01:0,3,46	0/0:58,0:16:2.43:0,2,10	0/0:24,0:25:20.34:0,20,498	1/1:5,15:20:5.85:285,6,0	1/1:32,4:32:26.39:665,26,0	1/1:38,0:30:24.74:124,25,0	0/0:35,0:37:44.57:0,45,637	0/0:40,0:36:46.95:0,47,532	0/1:19,0:19:0.97:1,0,170	1/1:34,5:36:41.79:964,42,0	0/0:23,0:25:33.01:0,33,478	0/0:20,0:19:42.12:0,42,600	0/0:37,0:37:50.91:0,51,668	0/1:6,10:18:28.69:359,0,29	1/1:12,21:32:33.09:732,33,0	0/1:13,26:42:54.77:805,0,55	0/0:20,0:15:12.87:0,13,211	0/0:28,0:28:40.42:0,40,534	0/0:122,0:120:99:0,148,2414	1/1:25,2:27:45.10:763,45,0	1/1:21,1:20:6.90:128,7,0	1/1:19,34:53:41.88:877,42,0	0/0:28,0:29:15.13:0,15,517	0/0:39,0:36:62.26:0,62,754	0/0:14,0:14:18.02:0,18,232	0/0:14,0:14:18.03:0,18,255
chr10	56342190	.	GGT	G	168.49	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=4.006;DP=946;FS=9.408;HRun=0;HaplotypeScore=147.9910;InbreedingCoeff=0.4404;MQ=47.52;MQ0=51;MQRankSum=1.998;QD=3.66;ReadPosRankSum=0.909;VQSLOD=2.3982;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:45,6:50:22.64:0,23,1420	0/0:5,0:7:5.74:0,6,39	0/0:87,0:7:9.02:0,9,126	0/0:69,0:3:5.61:0,6,57	0/0:26,0:25:39.13:0,39,617	0/0:16,0:15:6.91:0,7,253	0/0:38,1:36:12.10:0,12,983	0/0:35,0:34:55.31:0,55,493	1/1:15,19:33:10.93:253,11,0	0/0:37,0:30:59.03:0,59,1113	0/0:15,0:15:18.06:0,18,279	0/0:38,0:33:62.42:0,62,960	0/0:20,0:19:36.12:0,36,580	0/0:24,1:23:14.77:0,15,738	0/0:27,2:27:5.71:0,6,544	0/0:13,0:13:21.07:0,21,326	0/0:25,1:25:36.12:0,36,578	0/0:38,0:36:48.16:0,48,747	0/0:21,0:14:15.01:0,15,189	0/0:27,0:28:52.78:0,53,814	0/0:117,2:111:99:0,107,2913	0/0:23,0:23:51.40:0,51,787	0/0:8,0:8:9.03:0,9,145	0/0:45,2:46:40.28:0,40,736	0/0:25,0:25:45.14:0,45,682	0/0:37,0:32:55.41:0,55,815	0/1:12,0:12:4.80:5,0,406	0/0:10,0:9:21.07:0,21,312
chr10	56342300	.	A	ATG	1422.31	PASS	AB=0.938;AC=16;AF=0.286;AN=56;BaseQRankSum=1.689;DP=934;FS=25.509;HRun=0;HaplotypeScore=160.3824;InbreedingCoeff=0.2709;MQ=38.87;MQ0=144;MQRankSum=0.869;QD=4.15;ReadPosRankSum=2.466;VQSLOD=1.3921;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:42:93.26:0,93,1118	0/0:12,0:9:14.88:0,15,161	0/0:60,0:5:15.04:0,15,176	0/0:75,0:5:14.96:0,15,157	0/0:21,0:18:27.06:0,27,312	0/0:20,0:18:31.27:0,31,421	0/0:48,0:42:56.80:0,57,692	0/0:65,0:27:63.18:0,63,756	0/1:25,4:27:56.38:175,0,56	0/1:34,4:29:99:248,0,166	1/1:6,1:4:3.01:49,3,0	0/0:38,0:32:72.13:0,72,860	0/0:23,0:20:39.12:0,39,481	0/0:24,0:21:51.11:0,51,612	0/1:23,1:20:28.92:29,0,32	0/1:21,1:23:7.06:7,0,417	0/0:26,1:26:27.12:0,27,361	0/0:22,0:18:19.10:0,19,435	0/1:25,1:6:44.41:44,0,62	0/1:12,1:10:4.03:87,0,4	1/1:76,17:69:31.48:493,31,0	0/0:44,0:41:55.10:0,55,661	0/0:22,0:19:24.42:0,24,263	0/0:35,0:36:47.93:0,48,582	0/1:14,1:16:11.61:47,0,12	0/1:31,3:22:63.30:167,0,63	1/1:5,5:7:9.03:148,9,0	1/1:4,2:5:6.49:99,6,0
chr10	56342339	.	GTATGTATA	G	49.82	PASS	AB=0.908;AC=13;AF=0.241;AN=54;BaseQRankSum=6.157;DP=644;FS=5.617;HRun=0;HaplotypeScore=175.5706;InbreedingCoeff=0.3237;MQ=40.38;MQ0=42;MQRankSum=-5.357;QD=0.39;ReadPosRankSum=-5.134;VQSLOD=0.3937;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:39:99:0,102,4018	0/0:4,0:3:9.03:0,9,247	0/0:55,0:5:12.01:0,12,202	0/0:67,0:13:11.77:0,12,814	0/0:23,0:23:43.37:0,43,1459	0/0:18,0:19:29.36:0,29,1256	0/0:31,0:28:56.19:0,56,2447	0/0:40,0:32:77.56:0,78,2349	1/1:0,3:3:0.39:1,0,0	0/1:11,0:7:9.01:9,0,99	1/1:1,0:1:3.01:48,3,0	0/1:21,0:19:6.69:7,0,1077	0/0:36,0:33:84.05:0,84,2985	0/0:10,0:10:30.10:0,30,1012	1/1:8,0:5:0.89:3,1,0	0/0:24,0:21:34.71:0,35,1444	0/0:28,0:28:68.22:0,68,2425	0/0:21,0:20:60.21:0,60,2114	0/1:14,1:7:45.65:64,0,46	0/0:2,0:1:2.97:0,3,20	0/1:37,12:39:10.80:21,0,11	0/0:42,0:41:37.87:0,38,2737	0/0:15,0:14:23.77:0,24,776	0/0:46,0:46:65:0,65,2656	0/0:3,1:3:0.91:0,1,3	0/1:11,0:6:0:0,0,0	1/1:2,0:1:2.94:18,3,0	./.
chr10	56343206	.	A	ATG	759.73	PASS	AB=0.854;AC=13;AF=0.232;AN=56;BaseQRankSum=9.118;DP=509;FS=53.639;HRun=0;HaplotypeScore=195.1580;InbreedingCoeff=-0.1524;MQ=45.03;MQ0=2;MQRankSum=-7.885;QD=3.39;ReadPosRankSum=1.425;VQSLOD=1.1272;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:23,2:25:9.86:10,0,479	0/1:7,4:11:73.10:108,0,73	0/0:17,0:12:30.07:0,30,412	0/0:17,0:12:22.49:0,22,366	0/0:19,3:22:24.04:0,24,345	0/1:12,9:21:99:132,0,207	0/0:21,2:23:38.14:0,38,511	0/1:29,1:30:40.58:41,0,959	0/1:9,4:13:99:122,0,228	0/1:24,1:25:88.21:88,0,480	0/0:10,3:13:2.80:0,3,46	0/1:16,4:19:99:123,0,250	0/0:21,2:23:38.72:0,39,519	0/1:24,6:30:15.81:16,0,409	0/0:11,3:14:20.69:0,21,290	0/0:12,2:14:7.41:0,7,361	0/0:11,0:11:23.94:0,24,312	0/1:7,0:6:4.18:4,0,126	0/0:10,0:8:7.74:0,8,227	0/0:14,1:15:15.04:0,15,210	0/0:25,0:21:36.02:0,36,497	0/0:26,4:30:29.33:0,29,362	0/0:18,0:18:18.53:0,19,244	0/0:21,2:23:20.72:0,21,299	0/0:7,1:8:16.80:0,17,194	0/1:24,5:26:99:201,0,642	0/1:7,2:8:0.90:1,0,47	1/1:3,1:4:3.01:58,3,0
chr10	56343218	.	GGT	G	165.30	PASS	AB=0.912;AC=8;AF=0.143;AN=56;BaseQRankSum=11.099;DP=582;FS=62.281;HRun=0;HaplotypeScore=219.4951;InbreedingCoeff=-0.0258;MQ=49.71;MQ0=1;MQRankSum=-8.087;QD=1.33;ReadPosRankSum=4.368;VQSLOD=0.3397;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:26:41.97:0,42,910	0/1:12,2:14:62.35:62,0,226	0/0:26,0:22:46.14:0,46,910	0/0:22,0:17:51.12:0,51,933	0/0:22,2:25:40.86:0,41,787	0/1:20,2:22:4.09:4,0,412	0/0:23,0:24:60.16:0,60,1152	0/0:33,0:34:88.97:0,89,1689	0/1:12,1:13:3.54:4,0,400	0/1:30,1:31:93.90:94,0,937	0/0:13,0:13:16.87:0,17,222	0/0:22,0:22:2.50:0,2,635	0/0:22,2:24:17.40:0,17,788	0/0:30,1:31:36.06:0,36,842	0/0:15,0:16:33.10:0,33,586	0/0:15,0:15:15.12:0,15,596	0/0:15,0:15:42.10:0,42,803	0/0:8,0:7:4.70:0,5,279	0/0:14,0:14:42.11:0,42,786	0/0:17,1:17:31.52:0,32,533	0/0:34,0:28:60.68:0,61,1195	0/0:31,2:34:58.52:0,59,892	0/0:15,3:18:2.96:0,3,344	0/0:25,0:25:39.19:0,39,740	0/0:9,1:10:4.79:0,5,419	0/1:29,1:28:58.20:58,0,939	0/1:7,2:8:46.77:55,0,47	1/1:5,0:5:1.55:4,2,0
chr10	56343250	.	CTG	C	3853.44	PASS	AB=0.917;AC=19;AF=0.339;AN=56;BaseQRankSum=0.752;DP=772;FS=3.396;HRun=0;HaplotypeScore=257.5967;InbreedingCoeff=0.7185;MQ=48.41;MQ0=10;MQRankSum=0.580;QD=14.76;ReadPosRankSum=4.015;VQSLOD=3.3503;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:30,3:33:41.92:42,0,650	0/0:15,0:15:7.73:0,8,182	0/0:45,0:21:9.89:0,10,107	0/0:48,0:19:10.19:0,10,80	0/0:36,1:37:10.34:0,10,570	1/1:7,11:18:39.85:411,40,0	1/1:18,14:33:40.98:560,41,0	0/0:36,0:35:10.57:0,11,577	0/0:14,0:15:10.45:0,10,70	0/0:36,0:37:19.63:0,20,178	0/0:16,0:16:7.91:0,8,55	1/1:9,13:24:46.83:486,47,0	0/0:30,1:30:6.95:0,7,451	0/0:35,0:34:7.87:0,8,581	0/0:14,0:22:16.01:0,16,185	1/1:6,8:14:24.03:263,24,0	1/1:5,23:28:57.03:661,57,0	1/1:7,6:12:27.08:312,27,0	0/0:13,0:10:6:0,6,53	0/0:31,0:31:4.52:0,5,35	0/0:64,0:57:24.29:0,24,307	1/1:32,10:43:18.65:315,19,0	1/1:15,3:18:10.39:107,10,0	1/1:14,20:35:62.98:695,63,0	0/0:18,0:20:2.80:0,3,27	0/0:21,0:20:22.19:0,22,132	0/0:9,0:12:1.36:0,1,34	0/0:0,0:5:3:0,3,26
chr10	56343276	.	GTA	G	1430.28	PASS	AB=0.961;AC=17;AF=0.304;AN=56;BaseQRankSum=10.766;DP=891;FS=29.097;HRun=0;HaplotypeScore=260.9973;InbreedingCoeff=-0.1698;MQ=42.26;MQ0=18;MQRankSum=-1.858;QD=3.37;ReadPosRankSum=4.739;VQSLOD=1.4417;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:45.33:0,45,1017	0/1:15,2:17:23.48:23,0,209	0/0:68,0:8:11.05:0,11,119	0/0:79,0:18:3.53:0,4,158	0/0:36,0:36:39.47:0,39,648	1/1:25,0:24:2.09:196,2,0	0/1:30,0:31:47.38:183,0,47	0/0:27,0:25:50.18:0,50,920	0/0:16,0:16:17.70:0,18,150	0/1:40,0:39:38.62:39,0,394	0/1:22,0:22:6.87:7,0,94	0/1:28,0:29:57.14:225,0,57	0/0:24,0:23:15.54:0,16,465	0/1:35,0:34:0.18:0,0,698	0/0:24,0:24:14.07:0,14,280	0/1:16,0:16:62.72:91,0,63	0/1:35,0:35:99:218,0,132	0/1:13,1:16:70.55:130,0,71	0/0:11,0:10:7.84:0,8,157	0/1:34,1:35:15.80:16,0,56	0/0:95,0:81:81.20:0,81,1039	0/1:46,1:47:99:106,0,176	1/1:15,2:17:14.68:82,15,0	0/1:40,0:40:90.18:223,0,90	0/1:17,2:19:43.04:48,0,43	0/0:24,0:22:19.93:0,20,320	0/0:12,0:12:3.21:0,3,65	0/0:5,0:5:5.83:0,6,34
chr10	56343277	.	TA	T	1482.23	PASS	AB=0.856;AC=14;AF=0.250;AN=56;BaseQRankSum=6.902;DP=882;FS=146.611;HRun=1;HaplotypeScore=246.6868;InbreedingCoeff=-0.3289;MQ=42.06;MQ0=18;MQRankSum=-5.791;QD=3.18;ReadPosRankSum=-5.636;VQSLOD=-0.0093;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:94.76:0,95,1394	0/1:14,3:17:99:160,0,283	0/1:65,5:8:22.78:23,0,127	0/0:77,4:19:15.15:0,15,359	0/0:34,1:35:48.05:0,48,648	0/0:26,0:25:25.51:0,26,341	0/0:31,0:31:58.39:0,58,516	0/0:27,0:25:71.88:0,72,1070	0/1:16,3:19:78.07:78,0,182	0/1:26,14:39:99:448,0,533	0/1:17,5:22:8.65:9,0,171	0/0:30,0:29:61.63:0,62,544	0/0:20,1:20:45.36:0,45,644	0/1:32,1:32:35.13:35,0,697	0/1:18,6:24:65.11:65,0,211	0/0:16,0:16:32.37:0,32,327	0/0:33,2:35:81:0,81,880	0/0:16,0:16:36.97:0,37,428	0/0:10,0:10:20.63:0,21,258	0/1:19,16:35:99:257,0,160	0/1:77,15:79:99:238,0,1423	0/1:38,8:46:15.33:15,0,648	0/1:15,2:17:29.29:29,0,51	0/0:40,1:41:85.43:0,85,829	0/1:16,4:20:99:158,0,105	0/1:19,3:20:99:114,0,444	0/1:9,0:9:4.62:5,0,95	0/0:4,0:4:5.23:0,5,55
chr10	56343380	.	A	ATGTGTG	2840.29	PASS	AB=0.964;AC=38;AF=0.731;AN=52;BaseQRankSum=0.364;DP=730;FS=1.545;HRun=0;HaplotypeScore=185.8237;InbreedingCoeff=0.3910;MQ=46.13;MQ0=38;MQRankSum=-1.896;QD=4.72;ReadPosRankSum=-2.431;VQSLOD=2.5602;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:32:35.76:0,36,583	0/0:7,0:7:6.02:0,6,84	./.	0/1:66,0:15:0:0,0,0	0/0:12,0:14:8.32:0,8,95	1/1:11,0:22:9.02:107,9,0	0/1:31,0:31:36.46:115,0,36	0/1:30,0:27:2.56:3,0,20	1/1:17,0:16:4.26:81,4,0	1/1:31,0:27:24.67:234,25,0	1/1:14,0:14:5.97:46,6,0	0/1:27,0:27:24.75:273,0,25	0/0:17,0:18:23.80:0,24,376	0/1:26,0:29:1.07:1,0,276	1/1:25,0:24:8.99:121,9,0	1/1:9,10:17:6.49:175,6,0	1/1:24,1:26:20.92:245,21,0	1/1:9,0:18:5.95:96,6,0	1/1:18,0:13:5.94:41,6,0	./.	1/1:81,0:71:26.39:278,26,0	1/1:27,0:27:8.98:100,9,0	1/1:11,0:12:6.28:53,6,0	0/1:32,0:38:75.32:388,0,75	1/1:15,0:16:9.03:142,9,0	1/1:27,0:23:23.76:328,24,0	1/1:15,0:14:11.95:132,12,0	1/1:6,0:5:5.96:45,6,0
chr10	56344982	.	CTCTT	C	998.47	PASS	AC=18;AF=0.391;AN=46;BaseQRankSum=4.710;DP=344;FS=2.407;HRun=0;HaplotypeScore=54.1992;InbreedingCoeff=0.7306;MQ=28.71;MQ0=97;MQRankSum=-1.815;QD=9.00;ReadPosRankSum=-2.163;VQSLOD=1.9792;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:4:3.01:0,3,72	./.	./.	./.	0/0:22,0:18:15:0,15,298	1/1:9,9:11:6.02:96,6,0	1/1:5,6:7:12.04:193,12,0	1/1:10,0:15:6.01:56,6,0	0/0:13,0:11:21:0,21,447	0/0:19,0:18:30.06:0,30,625	0/0:18,0:15:21.07:0,21,500	1/1:4,2:4:3.01:48,3,0	0/0:10,0:6:6.02:0,6,143	0/0:9,0:6:9.03:0,9,214	0/0:17,0:8:5.98:0,6,92	1/1:2,8:8:6.02:97,6,0	1/1:7,11:12:9.03:144,9,0	1/1:4,11:6:6.02:96,6,0	0/0:17,0:12:21.07:0,21,423	0/0:29,0:23:54.06:0,54,1155	./.	1/1:2,3:5:6.02:96,6,0	1/1:5,8:12:21.07:337,21,0	./.	0/0:21,0:17:32.97:0,33,595	0/0:18,0:15:42.13:0,42,926	0/0:8,0:6:5.14:0,5,135	0/0:6,0:5:0:0,0,0
chr10	56345589	.	GT	G	579.85	PASS	AB=0.940;AC=18;AF=0.333;AN=54;BaseQRankSum=0.097;DP=400;FS=6.146;HRun=14;HaplotypeScore=48.1578;InbreedingCoeff=0.2327;MQ=57.25;MQ0=22;MQRankSum=-2.737;QD=3.29;ReadPosRankSum=0.961;VQSLOD=-0.7353;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:17,0:17:0.58:1,0,143	0/0:4,0:4:8.85:0,9,61	0/0:66,2:10:4.56:0,5,32	0/0:65,2:17:4.21:0,4,84	0/0:9,0:9:11.50:0,12,92	0/0:15,0:15:4.77:0,5,177	0/1:4,0:4:8.54:9,0,61	0/1:30,2:32:11.79:12,0,303	1/1:4,1:6:8.67:53,9,0	0/1:7,1:6:13.53:32,0,14	0/0:4,0:3:0:0,0,0	0/0:3,0:3:9:0,9,80	0/0:4,0:3:9:0,9,81	0/0:7,0:6:18.02:0,18,167	1/1:2,2:4:7.14:43,7,0	0/0:5,0:5:9.01:0,9,83	0/1:27,0:27:1.57:2,0,358	0/0:24,0:24:34.78:0,35,332	0/1:19,0:19:8.66:99,0,9	0/0:2,1:1:0:0,0,0	1/1:2,1:3:2.92:17,3,0	./.	0/0:1,0:1:3:0,3,27	0/0:8,0:8:17.59:0,18,132	0/1:5,0:4:14.41:14,0,19	1/1:7,13:19:41.04:273,41,0	1/1:11,0:11:14.15:83,14,0	0/1:10,4:14:14.66:98,0,15
chr10	56345605	.	GT	G	535.33	PASS	AB=0.909;AC=23;AF=0.411;AN=56;BaseQRankSum=2.803;DP=436;FS=4.326;HRun=13;HaplotypeScore=44.3343;InbreedingCoeff=0.5485;MQ=42.99;MQ0=43;MQRankSum=-3.343;QD=4.35;ReadPosRankSum=-0.590;VQSLOD=0.4603;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:23:33.48:0,33,295	1/1:2,1:2:2.98:22,3,0	0/0:81,1:5:1.25:0,1,3	0/0:66,3:14:2.26:0,2,57	0/0:13,0:12:15.01:0,15,139	0/0:14,0:14:26.35:0,26,167	0/0:7,0:7:8.56:0,9,55	1/1:13,14:26:19.57:284,20,0	1/1:7,0:6:1.32:9,1,0	1/1:6,1:4:1.78:5,2,0	1/1:1,1:1:2.98:21,3,0	0/0:7,0:4:2.54:0,3,28	0/0:6,0:3:4.95:0,5,52	0/0:8,0:7:14.93:0,15,128	1/1:4,1:5:4.52:25,5,0	0/0:4,0:3:8.97:0,9,70	0/0:37,0:32:57.89:0,58,442	0/0:22,0:20:19.97:0,20,269	1/1:15,4:16:0.49:72,0,0	1/1:2,1:1:2.98:21,3,0	0/0:4,0:2:0:0,0,0	0/0:2,0:2:2.88:0,3,15	0/0:3,0:2:3:0,3,28	0/0:11,0:11:19.24:0,19,146	1/1:5,1:4:4.95:39,5,0	1/1:17,2:17:20.13:104,20,0	0/1:9,0:10:6.75:7,0,10	1/1:12,1:11:13.27:92,13,0
chr10	56345800	.	G	GATCTACCT	17807.26	PASS	AC=42;AF=0.778;AN=54;BaseQRankSum=-5.919;DP=261;FS=1.364;HRun=0;HaplotypeScore=55.3280;InbreedingCoeff=0.8845;MQ=55.29;MQ0=1;MQRankSum=-9.930;QD=90.85;ReadPosRankSum=1.220;VQSLOD=4.8581;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:60.20:0,60,1711	1/1:0,3:4:9.03:415,9,0	0/0:11,0:11:29.48:0,29,708	0/0:16,0:15:36.05:0,36,897	0/0:5,0:5:15.05:0,15,439	1/1:0,8:9:24.08:1107,24,0	1/1:0,3:6:9.03:372,9,0	1/1:5,8:17:45.15:1577,45,0	1/1:1,2:2:6.02:197,6,0	1/1:0,5:5:12.04:555,12,0	1/1:2,6:9:15.05:691,15,0	1/1:1,6:7:18.06:828,18,0	0/0:5,0:5:15.05:0,15,454	0/0:7,0:7:18.06:0,18,545	1/1:0,11:10:30.10:1384,30,0	1/1:1,5:6:15.05:692,15,0	1/1:5,14:25:45.15:2000,45,0	1/1:2,9:17:24.08:1034,24,0	1/1:2,4:6:15.05:693,15,0	1/1:0,5:5:15.05:692,15,0	1/1:3,6:13:21.07:862,21,0	1/1:0,2:2:6.02:277,6,0	./.	1/1:0,3:7:6.02:277,6,0	1/1:1,6:8:18.06:830,18,0	1/1:0,8:9:24.07:994,24,0	1/1:0,13:15:30.10:1360,30,0	1/1:0,7:7:21.07:970,21,0
chr10	56347159	.	GCATGGACGT	G	1804.26	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.711;DP=624;FS=8.842;HRun=0;HaplotypeScore=166.9454;InbreedingCoeff=0.9779;MQ=73.27;MQ0=0;MQRankSum=-6.035;QD=48.76;ReadPosRankSum=-2.072;VQSLOD=2.1271;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,105,4877	1/1:1,7:8:18.06:518,18,0	0/0:23,0:22:45.15:0,45,1668	0/0:7,0:7:12.01:0,12,349	0/0:24,0:24:66.21:0,66,2856	0/0:23,0:23:69.24:0,69,3068	0/0:22,0:22:48.13:0,48,2006	1/1:12,17:29:51.17:1406,51,0	0/0:34,0:34:96.31:0,96,4349	0/0:22,0:22:60.19:0,60,2601	0/0:30,0:30:72.25:0,72,3304	0/0:21,0:21:57.20:0,57,2597	0/0:15,0:15:39.13:0,39,1815	0/0:10,0:10:21.05:0,21,851	0/0:34,0:34:93.32:0,93,4340	0/0:21,0:21:57.20:0,57,2624	0/0:22,0:22:63.22:0,63,2863	0/0:15,0:15:39.13:0,39,1592	0/0:19,0:19:36.12:0,36,1624	0/0:35,0:35:96.31:0,96,4270	0/0:26,0:26:66.23:0,66,2994	0/0:18,0:18:45.15:0,45,2074	0/0:21,0:21:54.19:0,54,2457	0/0:22,0:22:66.23:0,66,2970	0/0:19,0:19:48.16:0,48,2204	0/0:19,0:19:51.18:0,51,2328	0/0:22,0:22:54.19:0,54,2423	0/0:18,0:18:51.14:0,51,2165
chr10	56347642	.	C	CT	3962.32	PASS	AB=0.581;AC=16;AF=0.286;AN=56;BaseQRankSum=-9.246;DP=634;FS=2.653;HRun=10;HaplotypeScore=76.4078;InbreedingCoeff=0.8024;MQ=66.74;MQ0=7;MQRankSum=0.358;QD=19.81;ReadPosRankSum=2.349;VQSLOD=4.7420;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,129,1052	0/0:16,0:16:38.37:0,38,317	0/0:15,0:12:11.57:0,12,143	0/0:14,0:9:17.81:0,18,136	0/0:31,1:33:33.21:0,33,547	1/1:4,6:10:19.29:195,19,0	1/1:8,14:21:36.09:382,36,0	0/0:23,0:23:44.45:0,44,348	0/0:14,0:15:31.95:0,32,252	0/0:34,0:35:67.88:0,68,543	0/0:16,0:16:35.81:0,36,281	0/1:4,14:18:7.84:284,0,8	0/0:19,0:19:18.96:0,19,355	0/0:14,0:14:29.92:0,30,246	0/0:20,0:19:40.95:0,41,321	0/1:4,8:12:20.46:168,0,20	1/1:4,29:33:75.15:787,75,0	1/1:6,8:14:34.47:330,34,0	0/0:28,0:26:50.78:0,51,406	0/0:32,0:31:65.30:0,65,518	0/0:20,0:19:34.97:0,35,277	1/1:5,24:30:65.99:680,66,0	1/1:2,19:21:33.55:350,34,0	1/1:6,32:40:19.26:786,19,0	0/0:20,0:20:53.91:0,54,439	0/0:31,1:31:57.89:0,58,679	0/0:30,0:30:50.35:0,50,541	0/0:1,0:1:3:0,3,25
chr10	56349015	.	C	CA	2356.74	PASS	AB=0.866;AC=19;AF=0.352;AN=54;BaseQRankSum=-0.207;DP=494;FS=0.000;HRun=11;HaplotypeScore=64.0018;InbreedingCoeff=0.7573;MQ=50.00;MQ0=40;MQRankSum=2.396;QD=12.54;ReadPosRankSum=0.325;VQSLOD=3.3090;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:25,2:25:4.99:5,0,325	0/1:9,0:9:6.40:6,0,85	0/0:4,0:3:8.55:0,9,54	./.	0/0:25,2:27:28.24:0,28,390	1/1:4,9:12:9.42:259,9,0	0/1:5,5:9:5.20:134,0,5	0/0:20,0:19:34.22:0,34,259	0/0:9,0:10:17.92:0,18,139	0/0:23,0:22:40.97:0,41,302	0/0:15,0:12:29.15:0,29,228	1/1:6,13:19:20.51:319,21,0	0/0:15,0:14:27.95:0,28,197	0/0:19,0:19:31.60:0,32,237	0/0:22,0:20:41.78:0,42,322	1/1:3,13:17:41.75:394,42,0	1/1:6,17:23:41.87:398,42,0	1/1:5,5:16:32.27:254,32,0	0/0:24,1:23:11.30:0,11,266	0/0:10,0:9:17.89:0,18,139	0/0:29,0:28:53.76:0,54,415	1/1:6,11:15:11.08:284,11,0	1/1:6,6:10:14.86:152,15,0	1/1:7,13:16:35.94:349,36,0	0/0:17,0:17:29.55:0,30,219	0/0:31,0:28:58.79:0,59,462	0/0:25,1:23:32.32:0,32,433	0/0:7,0:3:5.98:0,6,46
chr10	56350050	.	C	CT	1095.81	PASS	AB=0.868;AC=23;AF=0.411;AN=56;BaseQRankSum=-2.810;DP=529;FS=5.601;HRun=16;HaplotypeScore=88.9587;InbreedingCoeff=0.0162;MQ=62.49;MQ0=17;MQRankSum=-1.692;QD=3.44;ReadPosRankSum=-2.000;VQSLOD=0.2129;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:30:20.45:0,20,184	0/1:9,0:8:15.16:15,0,25	0/1:27,0:13:5.98:33,0,6	0/0:18,0:13:2.84:0,3,9	0/1:36,3:42:19.88:20,0,174	0/0:11,0:14:26.46:0,26,134	0/0:15,0:15:22.34:0,22,122	0/0:25,0:29:24.88:0,25,132	0/1:14,7:19:15.47:78,0,15	1/1:19,5:25:6.72:153,7,0	0/1:16,0:15:4.71:53,0,5	0/0:6,0:6:11.59:0,12,66	0/1:9,1:9:10.23:10,0,42	0/1:15,3:17:21:21,0,82	1/1:7,4:11:5.99:48,6,0	0/0:14,0:15:17.32:0,17,81	0/0:30,1:30:52.90:0,53,278	0/0:23,2:25:0.53:0,1,183	0/1:15,6:22:51.30:136,0,51	1/1:11,4:16:4.82:107,5,0	0/1:6,1:6:3.47:18,0,3	0/1:6,4:9:42.71:43,0,60	0/0:19,0:19:5.17:0,5,125	0/1:20,2:24:23.83:24,0,143	1/1:4,5:11:0.16:105,0,0	0/1:17,3:20:2.42:107,0,2	1/1:13,2:17:27.48:202,27,0	0/1:4,3:9:2.27:86,0,2
chr10	56350303	.	CAA	C	1623.28	PASS	AB=0.904;AC=26;AF=0.481;AN=54;BaseQRankSum=5.774;DP=476;FS=21.959;HRun=15;HaplotypeScore=84.0216;InbreedingCoeff=0.3279;MQ=74.24;MQ0=25;MQRankSum=-3.116;QD=7.25;ReadPosRankSum=4.952;VQSLOD=-0.3192;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:28:47.19:0,47,529	0/0:6,0:8:20.73:0,21,172	0/0:71,0:26:27.43:0,27,198	0/0:58,0:20:11.55:0,12,124	0/0:23,0:23:50.28:0,50,590	1/1:2,6:7:2.96:71,3,0	1/1:6,8:11:9.21:174,9,0	0/0:13,0:22:40.69:0,41,360	0/1:12,0:12:14.36:20,0,14	1/1:14,0:14:9.38:52,9,0	0/1:12,0:13:12.91:13,0,19	1/1:7,2:7:14.50:105,15,0	0/0:4,0:4:12.02:0,12,134	0/0:9,0:9:15.04:0,15,188	0/1:15,0:15:5.52:37,0,6	1/1:3,10:12:20.96:185,21,0	1/1:4,9:13:32.33:250,32,0	1/1:8,11:18:16.86:252,17,0	0/0:22,0:22:0.66:0,1,131	0/1:11,0:10:21.75:22,0,24	0/0:1,0:1:0:0,0,0	1/1:0,6:6:18:158,18,0	0/1:6,8:15:5.15:235,0,5	1/1:1,6:6:12:106,12,0	0/1:8,0:10:23.75:24,0,32	0/1:13,0:16:35.19:35,0,57	0/1:25,0:24:29.95:68,0,30	./.
chr10	56350313	.	AAAAAAG	A	1687.90	PASS	AB=0.992;AC=18;AF=0.333;AN=54;BaseQRankSum=5.708;DP=513;FS=5.890;HRun=0;HaplotypeScore=125.3151;InbreedingCoeff=-0.2020;MQ=67.55;MQ0=28;MQRankSum=-5.744;QD=6.14;ReadPosRankSum=0.577;VQSLOD=2.0357;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:54.14:0,54,1283	0/0:7,0:7:20.45:0,20,332	0/0:67,0:21:22.99:0,23,226	0/0:62,0:18:10.72:0,11,117	0/0:24,0:24:66.17:0,66,1496	0/1:9,0:8:20.19:20,0,72	0/1:14,0:11:2.14:2,0,176	0/0:24,0:20:52.79:0,53,898	0/1:11,0:11:12.35:80,0,12	1/1:11,3:13:21.77:286,22,0	0/1:16,0:16:10.96:121,0,11	0/1:12,0:10:7.85:8,0,198	0/0:6,0:6:18.03:0,18,320	0/0:8,0:7:18.05:0,18,435	0/1:17,1:18:2.77:161,0,3	0/1:13,0:12:3.55:4,0,212	0/1:20,0:17:99:115,0,169	0/1:21,0:19:24.57:25,0,333	0/1:24,0:24:99:137,0,132	0/1:16,0:13:2.88:156,0,3	0/0:1,0:1:0:0,0,0	0/1:8,0:8:33.65:34,0,120	0/1:21,0:20:29.19:29,0,422	0/0:9,0:8:12.33:0,12,118	0/1:12,1:13:20.54:189,0,21	0/1:21,0:21:64.83:238,0,65	0/1:24,0:24:28.14:238,0,28	./.
chr10	56350314	.	AAAAAG	A	3589.34	PASS	AB=0.803;AC=18;AF=0.333;AN=54;BaseQRankSum=-0.225;DP=512;FS=2.054;HRun=0;HaplotypeScore=112.5875;InbreedingCoeff=0.7287;MQ=66.68;MQ0=28;MQRankSum=-5.221;QD=21.62;ReadPosRankSum=-0.988;VQSLOD=3.4539;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:51.11:0,51,1050	0/0:7,0:7:16.96:0,17,256	0/0:67,0:20:4.39:0,4,110	0/0:62,0:18:15.83:0,16,103	0/0:24,0:24:63.12:0,63,1225	0/1:9,0:8:19.60:20,0,52	0/0:14,0:11:14.73:0,15,161	0/0:25,0:21:55.28:0,55,759	1/1:3,8:11:14.95:228,15,0	1/1:10,4:13:32.96:404,33,0	1/1:14,2:16:16.74:269,17,0	0/0:12,0:10:11.59:0,12,177	0/0:6,0:6:17.95:0,18,267	0/0:7,0:6:18.04:0,18,369	1/1:3,15:18:18:300,18,0	0/0:13,0:12:15.79:0,16,191	0/0:20,0:17:1.45:0,1,147	0/0:21,0:19:14.36:0,14,290	0/1:8,15:23:7.75:381,0,8	1/1:14,2:13:26.95:356,27,0	0/0:1,0:1:0:0,0,0	0/0:8,0:8:5.51:0,6,118	0/0:21,0:20:26.09:0,26,376	0/0:9,0:8:17.36:0,17,158	1/1:10,3:13:21.29:380,21,0	1/1:15,7:22:52.28:629,52,0	1/1:10,14:24:18.69:622,19,0	./.
chr10	56350315	.	AAAAG	A	2365.39	PASS	AB=1.000;AC=20;AF=0.370;AN=54;BaseQRankSum=1.609;DP=513;FS=1.795;HRun=0;HaplotypeScore=109.1221;InbreedingCoeff=0.8371;MQ=64.80;MQ0=28;MQRankSum=-3.958;QD=10.51;ReadPosRankSum=-0.971;VQSLOD=3.1466;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:45.11:0,45,812	0/0:8,0:8:9.47:0,9,175	0/0:64,0:19:2.11:0,2,32	0/1:61,0:17:0.10:0,0,0	0/0:24,0:24:57.07:0,57,954	0/1:8,0:7:0.19:0,0,33	0/0:11,0:11:8.20:0,8,84	0/0:27,0:23:42.10:0,42,545	1/1:10,1:11:12.03:133,12,0	1/1:13,0:12:30.02:296,30,0	1/1:16,0:16:19.24:197,19,0	0/0:13,0:11:14.25:0,14,123	0/0:7,0:7:15.02:0,15,198	0/0:7,0:6:15.04:0,15,274	1/1:18,0:18:18.05:198,18,0	0/0:12,0:12:18.75:0,19,124	0/0:20,0:17:17.28:0,17,115	0/0:19,0:19:21.29:0,21,213	1/1:22,0:22:29.92:291,30,0	1/1:16,0:14:26.78:252,27,0	0/0:1,0:1:0:0,0,0	0/0:8,0:8:12.31:0,12,80	0/0:21,0:20:32.84:0,33,260	0/0:9,0:8:17.56:0,18,115	1/1:12,1:13:29.35:276,29,0	1/1:22,0:22:47.99:461,48,0	1/1:18,6:24:39.11:457,39,0	./.
chr10	56350335	.	GAAAAGAAAAAGA	G	3147.48	PASS	AB=0.800;AC=21;AF=0.420;AN=50;BaseQRankSum=3.513;DP=408;FS=3.477;HRun=0;HaplotypeScore=137.6958;InbreedingCoeff=0.7660;MQ=46.72;MQ0=21;MQRankSum=-6.310;QD=23.31;ReadPosRankSum=2.888;VQSLOD=2.8466;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:48.16:0,48,2220	1/1:3,2:6:6.02:205,6,0	./.	./.	0/0:33,0:33:75.26:0,75,3396	1/1:4,1:4:6.02:204,6,0	1/1:7,1:8:6.02:192,6,0	1/1:22,0:19:6.02:116,6,0	0/0:9,0:9:6.02:0,6,242	0/0:15,0:14:27.09:0,27,1192	0/0:14,0:14:39.12:0,39,1401	1/1:7,4:10:3.01:103,3,0	0/0:5,0:5:12.04:0,12,689	0/0:6,0:6:9.03:0,9,378	0/0:16,0:16:17.60:0,18,681	1/1:6,2:8:9.03:244,9,0	1/1:10,8:17:18.06:616,18,0	1/1:14,1:16:15.05:495,15,0	0/0:16,0:16:18.06:0,18,734	0/0:19,0:16:30.10:0,30,1059	./.	1/1:4,5:9:12.04:410,12,0	1/1:11,12:22:17.04:534,17,0	0/1:6,1:7:15.92:216,0,16	0/0:13,0:13:24.08:0,24,965	0/0:25,0:25:51.17:0,51,2143	0/0:21,0:21:26.73:0,27,914	0/0:5,0:4:12.04:0,12,465
chr10	56350650	.	G	GA	2003.02	PASS	AB=0.730;AC=24;AF=0.429;AN=56;BaseQRankSum=-3.601;DP=440;FS=14.008;HRun=12;HaplotypeScore=44.8848;InbreedingCoeff=0.4356;MQ=55.62;MQ0=10;MQRankSum=-1.553;QD=9.68;ReadPosRankSum=-3.267;VQSLOD=0.1814;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,1:35:82.39:0,82,588	0/1:3,2:4:7.91:50,0,8	0/0:10,0:2:0:0,0,0	0/1:19,1:8:24.62:25,0,49	0/0:21,0:23:53.41:0,53,356	0/0:14,0:14:34.33:0,34,240	0/0:15,0:16:12.36:0,12,163	1/1:6,12:17:34.13:307,34,0	1/1:3,11:13:11.83:117,12,0	1/1:9,8:16:27.50:222,27,0	1/1:6,7:12:11.90:117,12,0	0/0:7,0:8:16.92:0,17,115	0/0:11,0:11:17.89:0,18,131	0/0:7,0:7:11.81:0,12,80	1/1:7,8:14:16.25:196,16,0	0/1:5,1:6:14.20:14,0,71	0/0:36,0:35:54.15:0,54,549	0/0:28,1:26:26.82:0,27,347	1/1:6,12:17:3.70:293,4,0	0/1:3,9:12:6.91:91,0,7	0/1:2,7:9:6.89:102,0,7	0/1:8,1:10:3.26:3,0,133	0/0:12,0:13:24.92:0,25,165	0/0:26,0:27:53.17:0,53,424	0/1:7,8:12:3.88:128,0,4	1/1:2,11:13:22.44:230,22,0	0/1:5,8:13:22.79:125,0,23	1/1:2,5:7:20.60:177,21,0
chr10	56351898	.	TG	T	6333.02	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=9.615;DP=393;FS=4.815;HRun=1;HaplotypeScore=44.1168;InbreedingCoeff=0.9512;MQ=57.68;MQ0=8;MQRankSum=1.768;QD=37.92;ReadPosRankSum=1.491;VQSLOD=5.0454;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:26:72.25:0,72,1151	0/0:5,0:5:12.04:0,12,192	0/0:4,0:2:3.01:0,3,32	0/0:8,0:2:6.02:0,6,96	0/0:19,0:19:51.17:0,51,814	0/0:17,0:17:48.16:0,48,767	0/0:6,0:6:18.06:0,18,287	0/0:16,0:15:42.10:0,42,636	1/1:0,10:10:30.10:419,30,0	1/1:0,20:20:57.17:779,57,0	1/1:0,23:23:66.22:923,66,0	0/0:13,0:13:36.58:0,37,553	0/0:9,0:9:21.07:0,21,336	0/0:9,0:9:27.09:0,27,422	1/1:0,12:12:33.11:461,33,0	0/0:18,0:18:51.17:0,51,813	0/0:27,0:26:75.26:0,75,1199	0/0:19,0:18:42.14:0,42,671	1/1:1,12:12:33.09:461,33,0	1/1:0,23:23:57.19:794,57,0	1/1:0,11:11:33.11:461,33,0	0/0:8,0:8:24.08:0,24,384	0/0:15,0:15:42.13:0,42,648	0/0:6,0:6:15.04:0,15,217	1/1:1,12:13:36.09:483,36,0	1/1:0,16:16:48.16:670,48,0	1/1:0,16:16:39.13:545,39,0	1/1:1,9:10:23.99:335,24,0
chr10	56352498	.	T	TATAAATAAATAAATAAATAA	7005.57	PASS	AC=34;AF=0.708;AN=48;BaseQRankSum=1.002;DP=311;FS=17.214;HRun=0;HaplotypeScore=160.7323;InbreedingCoeff=0.6539;MQ=61.31;MQ0=0;MQRankSum=-4.390;QD=37.46;ReadPosRankSum=-4.828;VQSLOD=1.4118;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:36.11:0,36,1654	1/1:4,0:8:5.99:100,6,0	0/0:15,0:15:3.01:0,3,44	./.	0/0:23,0:23:36.11:0,36,1776	1/1:6,0:11:27.09:913,27,0	./.	1/1:29,0:29:48.13:1054,48,0	1/1:9,0:9:3.01:79,3,0	1/1:16,0:15:3.01:121,3,0	1/1:13,0:13:7.84:333,8,0	1/1:4,0:4:3.01:70,3,0	./.	0/0:7,0:7:15.05:0,15,785	1/1:7,0:7:9.02:397,9,0	0/0:5,0:6:3.01:0,3,59	0/0:19,0:19:33.11:0,33,1751	0/0:16,0:16:33.11:0,33,1474	1/1:21,2:22:24.08:1483,24,0	./.	1/1:3,0:3:3.01:57,3,0	1/1:5,0:6:5.99:98,6,0	1/1:8,0:8:6.02:168,6,0	1/1:4,0:5:1.55:4,2,0	1/1:8,1:9:12.93:867,13,0	1/1:11,0:11:6.02:325,6,0	1/1:9,0:9:9.03:379,9,0	1/1:6,4:16:6.02:557,6,0
chr10	56352564	.	TGATA	T	2884.80	PASS	AB=0.958;AC=20;AF=0.385;AN=52;BaseQRankSum=7.600;DP=395;FS=14.014;HRun=0;HaplotypeScore=77.9891;InbreedingCoeff=0.7899;MQ=56.32;MQ0=9;MQRankSum=1.138;QD=19.90;ReadPosRankSum=0.102;VQSLOD=2.2891;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:21:21.07:0,21,466	0/0:6,0:6:9.03:0,9,212	./.	./.	0/0:28,0:28:39.13:0,39,915	1/1:7,8:16:15.52:234,16,0	1/1:5,5:10:15.05:233,15,0	0/0:34,0:33:11.95:0,12,171	0/0:3,0:7:12.04:0,12,205	1/1:5,11:15:33.10:490,33,0	1/1:5,15:20:39.13:606,39,0	1/1:1,5:6:12.04:186,12,0	0/0:7,0:7:21.07:0,21,494	0/0:9,0:9:18.06:0,18,423	1/1:5,14:19:30.10:466,30,0	1/1:1,8:9:12.04:186,12,0	0/0:20,0:21:46.71:0,47,1064	0/1:6,0:16:29.68:30,0,51	0/0:16,0:16:21.07:0,21,494	0/1:10,1:11:22.52:23,0,468	0/0:7,0:7:12.04:0,12,242	1/1:3,12:16:30.10:447,30,0	0/0:17,0:17:39.13:0,39,916	1/1:1,5:6:12.04:186,12,0	0/0:12,0:12:27.09:0,27,633	0/0:4,0:15:30.60:0,31,439	0/0:13,1:13:33.11:0,33,747	0/0:14,0:13:15.05:0,15,300
chr10	56353343	.	G	GCA	673.45	PASS	AB=0.835;AC=16;AF=0.308;AN=52;BaseQRankSum=-1.849;DP=492;FS=2.785;HRun=0;HaplotypeScore=65.4100;InbreedingCoeff=-0.0424;MQ=54.56;MQ0=16;MQRankSum=0.878;QD=2.66;ReadPosRankSum=-1.270;VQSLOD=1.7034;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:19:8.79:0,9,57	1/1:11,0:11:2.02:6,2,0	./.	./.	0/0:9,0:9:9.02:0,9,96	0/0:19,0:19:26.09:0,26,232	0/1:27,0:30:7.95:8,0,102	1/1:22,0:20:2.96:7,3,0	0/1:6,5:11:21.65:80,0,22	0/1:11,4:16:8.34:184,0,8	0/0:7,0:9:2.37:0,2,8	0/0:14,0:14:17.95:0,18,170	0/0:11,0:11:12.50:0,12,131	0/0:11,0:15:29.34:0,29,252	0/1:7,3:9:26.31:39,0,26	0/0:10,0:10:15:0,15,150	0/0:31,0:32:35.02:0,35,343	0/1:29,1:34:9.81:10,0,385	0/0:6,0:6:4.78:0,5,37	1/1:8,4:12:3.01:45,3,0	0/1:32,12:48:35.83:36,0,56	0/0:18,0:17:2.46:0,2,74	0/0:12,0:12:3:0,3,33	0/0:34,0:36:21.79:0,22,146	0/1:11,1:11:23.77:80,0,24	0/1:21,0:19:51.32:71,0,51	0/1:11,2:13:2.02:170,0,2	0/1:5,8:13:16.55:81,0,17
chr10	56353458	.	TA	T	3145.13	PASS	AB=0.900;AC=23;AF=0.411;AN=56;BaseQRankSum=10.026;DP=457;FS=0.803;HRun=11;HaplotypeScore=50.3039;InbreedingCoeff=0.9127;MQ=72.82;MQ0=0;MQRankSum=1.205;QD=18.61;ReadPosRankSum=2.712;VQSLOD=4.5672;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,1:31:56.61:0,57,782	0/0:11,0:11:18.05:0,18,192	0/0:19,0:16:6.03:0,6,166	0/0:15,0:12:14.69:0,15,123	0/0:21,0:21:60.11:0,60,616	0/0:16,0:16:42.09:0,42,438	0/0:16,0:16:27.05:0,27,279	0/0:24,0:26:56.78:0,57,553	1/1:0,8:8:23.97:197,24,0	1/1:3,19:22:56.91:464,57,0	1/1:1,16:17:41.95:345,42,0	0/0:18,0:18:51.13:0,51,543	0/0:12,0:12:36.08:0,36,378	0/1:8,1:9:3.59:4,0,171	1/1:0,4:4:8.99:74,9,0	0/0:13,1:14:11.44:0,11,320	0/0:22,2:24:16.89:0,17,591	0/0:25,0:25:60.11:0,60,627	1/1:2,14:16:41.85:329,42,0	1/1:3,11:14:32.96:271,33,0	1/1:0,21:22:58.97:474,59,0	0/0:9,0:9:21.05:0,21,224	0/0:11,0:11:26.90:0,27,270	0/0:20,0:20:57.11:0,57,592	1/1:1,10:11:26.97:222,27,0	1/1:2,21:23:62.90:513,63,0	1/1:2,15:17:41.95:345,42,0	1/1:0,5:6:17.02:129,17,0
chr10	56354380	.	CAT	C	1886.37	PASS	AB=0.819;AC=15;AF=0.268;AN=56;BaseQRankSum=8.213;DP=1172;FS=10.512;HRun=0;HaplotypeScore=250.8268;InbreedingCoeff=-0.3183;MQ=42.82;MQ0=37;MQRankSum=-8.240;QD=3.08;ReadPosRankSum=-5.962;VQSLOD=-0.1875;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:57:81.63:0,82,1686	0/1:7,3:10:26.30:26,0,40	0/0:15,0:6:18.03:0,18,311	0/0:20,0:7:20.86:0,21,238	0/0:32,0:32:96.26:0,96,1631	0/1:28,10:36:2.36:2,0,436	0/0:31,9:32:21.07:0,21,205	0/1:64,4:43:99:139,0,554	0/0:37,23:59:70:0,70,540	0/1:47,8:47:99:278,0,528	0/0:25,12:32:39.98:0,40,301	0/1:38,17:56:99:109,0,362	0/0:50,0:50:99:0,144,2603	0/0:43,0:43:99:0,123,2280	0/0:40,14:53:65.75:0,66,540	0/1:38,16:52:99:142,0,478	0/1:29,5:32:99:131,0,174	0/1:24,4:28:99:146,0,301	0/1:23,3:14:92.39:92,0,194	0/0:33,22:53:46.87:0,47,360	0/1:63,3:55:4.60:5,0,319	0/0:37,17:53:24.43:0,24,458	0/1:26,12:37:54.41:54,0,165	0/1:33,7:39:16.67:17,0,216	0/0:23,16:38:8.97:0,9,71	0/1:27,18:43:99:600,0,411	0/1:30,11:40:99:130,0,318	0/1:7,7:13:5.90:168,0,6
chr10	56354382	.	T	TAC	16718.64	PASS	AB=0.778;AC=40;AF=0.714;AN=56;BaseQRankSum=3.861;DP=1189;FS=12.843;HRun=0;HaplotypeScore=205.9259;InbreedingCoeff=0.6075;MQ=42.46;MQ0=38;MQRankSum=-3.884;QD=17.18;ReadPosRankSum=-0.282;VQSLOD=3.4726;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:58:89.13:0,89,1222	1/1:6,4:10:6.02:86,6,0	0/0:15,0:6:15.05:0,15,193	0/0:20,0:6:6.02:0,6,78	0/0:31,0:31:75.25:0,75,998	1/1:23,15:36:42.06:883,42,0	0/1:25,17:34:28.49:251,0,28	0/1:57,13:45:99:746,0,115	1/1:36,26:60:51.27:1086,51,0	1/1:37,19:49:99:1665,111,0	1/1:29,10:34:33.10:527,33,0	1/1:33,24:57:71.96:1107,72,0	0/0:48,0:48:99:0,138,1805	0/0:43,0:43:99:0,117,1539	1/1:36,21:56:60.18:1009,60,0	1/1:33,22:53:81.20:1266,81,0	1/1:25,10:33:28.17:715,28,0	0/1:20,8:28:8.14:665,0,8	1/1:22,6:15:22.95:472,23,0	1/1:38,19:54:42.14:723,42,0	1/1:46,18:53:44.11:697,44,0	1/1:40,15:53:57.14:883,57,0	1/1:24,15:38:42.09:628,42,0	0/1:28,11:38:16.73:371,0,17	1/1:19,17:35:6.02:104,6,0	1/1:34,15:47:99:1533,117,0	1/1:19,23:41:69.20:1073,69,0	1/1:14,1:14:20.84:230,21,0
chr10	56354388	.	CAT	C	3761.78	PASS	AB=0.943;AC=22;AF=0.393;AN=56;BaseQRankSum=8.219;DP=1155;FS=2.259;HRun=0;HaplotypeScore=240.9282;InbreedingCoeff=-0.5268;MQ=42.35;MQ0=32;MQRankSum=-0.872;QD=4.13;ReadPosRankSum=-2.365;VQSLOD=2.7406;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:60,0:59:96.19:0,96,1799	0/1:10,0:10:7.86:8,0,29	0/0:12,0:5:15.04:0,15,200	0/0:12,1:4:6.02:0,6,94	0/0:30,0:30:90.21:0,90,1564	0/1:34,3:35:84.97:85,0,119	0/1:38,0:31:24.37:24,0,98	0/1:62,2:43:99:356,0,362	0/1:60,2:60:84.25:136,0,84	0/1:46,7:46:60.68:447,0,61	0/1:35,2:32:22.01:130,0,22	0/1:57,0:58:51.43:285,0,51	0/0:52,0:51:99:0,150,2719	0/0:44,0:44:99:0,126,2319	0/1:52,5:56:25.66:117,0,26	0/1:56,3:57:99:211,0,114	0/1:33,2:33:27.90:250,0,28	0/1:24,3:27:97.55:125,0,98	0/1:26,1:14:50.52:61,0,51	0/1:52,5:54:53.03:92,0,53	0/1:52,8:49:34.71:207,0,35	0/1:48,5:51:27.99:203,0,28	0/1:35,3:37:24.38:214,0,24	0/1:39,3:40:17.16:97,0,17	0/0:34,0:33:5.96:0,6,44	0/1:42,2:42:55.59:329,0,56	0/1:38,1:38:14.66:282,0,15	1/1:12,0:11:5.53:103,6,0
chr10	56354394	.	TAC	T	4178.06	PASS	AB=0.763;AC=21;AF=0.375;AN=56;BaseQRankSum=3.114;DP=1141;FS=22.662;HRun=0;HaplotypeScore=232.7767;InbreedingCoeff=-0.4670;MQ=42.40;MQ0=33;MQRankSum=-4.154;QD=4.99;ReadPosRankSum=-5.753;VQSLOD=0.4703;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:60,1:60:92.78:0,93,1465	0/1:4,7:11:42.89:62,0,43	0/0:14,0:3:2.97:0,3,20	0/0:10,0:4:5.98:0,6,52	0/0:33,0:32:87.28:0,87,1449	0/1:23,12:33:15.67:16,0,603	0/1:29,10:32:99:157,0,221	0/1:49,11:37:99:409,0,268	0/1:34,27:59:8.37:8,0,823	0/1:40,12:45:99:566,0,681	0/0:15,16:26:18.06:0,18,281	0/1:36,21:57:99:358,0,598	0/0:53,0:52:99:0,140,2353	0/0:45,0:44:99:0,120,2012	0/0:36,20:55:42.12:0,42,647	0/1:39,22:59:99:370,0,577	0/1:28,7:33:99:244,0,260	0/1:20,4:24:99:153,0,387	0/1:22,4:13:99:116,0,252	0/1:29,30:55:20.39:20,0,395	0/1:57,2:48:53.86:54,0,311	0/1:27,20:46:99:113,0,426	0/1:24,13:36:99:201,0,229	0/1:29,12:39:99:127,0,222	0/1:19,16:34:51.96:52,0,92	0/1:24,22:44:99:736,0,536	0/1:28,12:39:99:163,0,518	1/1:3,9:11:21.74:251,22,0
chr10	56354464	.	TAC	T	15918.49	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=15.006;DP=1225;FS=4.788;HRun=0;HaplotypeScore=205.9632;InbreedingCoeff=0.9623;MQ=49.58;MQ0=21;MQRankSum=2.920;QD=30.26;ReadPosRankSum=4.244;VQSLOD=5.8902;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:45:47.67:0,48,1536	0/0:13,0:13:24.08:0,24,463	0/0:38,0:7:18.06:0,18,295	0/0:51,0:17:37.52:0,38,561	0/0:37,0:37:99:0,105,1929	0/0:28,0:28:48.16:0,48,896	0/0:27,0:24:60.16:0,60,1089	0/0:73,0:60:99:0,166,3006	1/1:7,42:49:60.18:897,60,0	1/1:7,75:80:99:3530,235,0	1/1:2,34:35:72.24:1100,72,0	0/0:52,0:52:99:0,108,2052	0/0:56,0:56:99:0,168,3014	0/0:53,0:53:99:0,153,2832	1/1:1,46:46:51.17:781,51,0	0/0:57,0:57:99:0,132,2426	0/0:28,0:29:58.03:0,58,1040	0/0:19,0:20:57.15:0,57,1027	1/1:5,17:19:0.34:726,0,0	1/1:8,47:53:99:1619,108,0	1/1:16,63:73:79.46:1707,79,0	0/0:44,0:44:99:0,123,2326	0/0:41,0:41:99:0,114,2199	0/0:33,0:31:48.16:0,48,919	1/1:6,27:33:69.23:1054,69,0	1/1:7,52:58:99:2360,162,0	1/1:1,36:37:81.27:1228,81,0	1/1:2,25:27:59.88:917,60,0
chr10	56354516	.	TAC	T	1082	PASS	AB=0.902;AC=4;AF=0.071;AN=56;BaseQRankSum=1.899;DP=1398;FS=2.780;HRun=0;HaplotypeScore=296.4111;InbreedingCoeff=0.4083;MQ=49.05;MQ0=37;MQRankSum=-4.397;QD=8.73;ReadPosRankSum=-3.464;VQSLOD=2.5992;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,1:38:21.31:0,21,942	1/1:1,19:20:39.13:519,39,0	0/0:21,0:6:11.71:0,12,78	0/0:13,0:2:3.01:0,3,43	0/0:38,0:38:99:0,105,1810	0/0:25,0:25:39.09:0,39,593	0/0:27,0:23:48.09:0,48,694	0/1:53,17:44:99:664,0,164	0/0:66,0:66:63.21:0,63,1081	0/0:117,0:109:99:0,300,4864	0/0:47,0:45:96.30:0,96,1584	0/0:74,0:74:99:0,150,2468	0/0:55,0:55:99:0,156,2529	0/0:60,0:60:99:0,162,2635	0/0:53,0:52:66.20:0,66,1066	0/0:58,0:58:99:0,117,1934	0/0:29,1:29:52.97:0,53,841	0/1:34,0:34:12.85:13,0,752	0/0:26,0:16:13.49:0,13,461	0/0:43,0:43:99:0,102,1705	0/0:102,0:86:99:0,101,1785	0/0:54,0:54:99:0,144,2333	0/0:61,0:61:99:0,162,2672	0/0:63,1:64:84.23:0,84,1326	0/0:35,0:34:70.44:0,70,1117	0/0:85,0:82:99:0,219,3473	0/0:51,0:51:96.25:0,96,1538	0/0:29,0:29:71.85:0,72,1045
chr10	56354586	.	CAT	C	1723.57	PASS	AB=0.905;AC=17;AF=0.304;AN=56;BaseQRankSum=11.760;DP=1144;FS=10.608;HRun=0;HaplotypeScore=244.4253;InbreedingCoeff=0.4325;MQ=41.91;MQ0=23;MQRankSum=-4.035;QD=3.41;ReadPosRankSum=-5.959;VQSLOD=-0.2991;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:46:55.47:0,55,998	0/0:24,0:24:54.14:0,54,918	0/0:24,0:7:21:0,21,335	0/0:48,1:25:53.71:0,54,731	0/0:26,0:26:75.09:0,75,1267	0/0:17,0:17:18.05:0,18,320	0/0:28,1:26:29.95:0,30,540	0/0:71,0:48:99:0,129,2154	0/1:32,3:34:1.70:24,0,2	0/1:72,14:79:99:631,0,502	1/1:29,6:32:15.81:85,16,0	0/0:45,0:45:62.80:0,63,1052	0/0:43,0:43:99:0,120,2096	0/0:56,0:56:99:0,156,2622	1/1:38,7:43:3.94:37,4,0	0/0:42,0:41:47.87:0,48,810	0/0:21,3:23:20.99:0,21,374	0/1:21,2:23:42.29:42,0,346	0/1:17,1:12:71.06:71,0,102	1/1:37,6:43:7.56:42,8,0	1/1:50,4:47:12.38:98,12,0	0/0:48,0:46:71.18:0,71,1273	0/0:40,0:40:72.18:0,72,1125	0/0:51,3:54:54.16:0,54,926	1/1:20,4:24:3.89:32,4,0	0/1:82,10:86:99:621,0,518	0/1:24,6:28:3.81:144,0,4	0/1:20,1:20:2.49:73,0,2
chr10	56354588	.	T	TAC	7007.89	PASS	AB=0.766;AC=20;AF=0.357;AN=56;BaseQRankSum=14.903;DP=1126;FS=25.513;HRun=0;HaplotypeScore=220.1439;InbreedingCoeff=0.6169;MQ=42.55;MQ0=19;MQRankSum=-10.567;QD=14.24;ReadPosRankSum=-2.065;VQSLOD=3.0637;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:44.99:0,45,868	0/0:24,0:24:53.96:0,54,782	0/0:27,0:10:23.87:0,24,313	0/0:52,0:25:56.75:0,57,731	0/0:29,0:29:80.71:0,81,1136	0/0:17,0:17:18.06:0,18,274	0/0:28,0:26:29.95:0,30,458	0/0:67,0:49:99:0,132,1963	1/1:12,22:33:12.02:183,12,0	0/1:48,37:78:99:2333,0,103	1/1:17,18:32:21.02:316,21,0	0/0:45,0:45:63.18:0,63,917	0/0:44,0:44:99:0,120,1811	0/0:55,0:55:99:0,159,2348	1/1:20,25:43:6.02:174,6,0	0/0:42,0:41:48.15:0,48,711	0/0:22,0:21:9.26:0,9,305	0/1:22,0:22:43.61:44,0,290	0/1:11,5:12:39.29:322,0,39	1/1:22,21:43:9.02:131,9,0	1/1:39,11:43:12.37:98,12,0	0/0:47,0:45:71.57:0,72,1092	0/0:37,0:37:72.17:0,72,1008	0/0:51,0:51:54.17:0,54,799	1/1:11,12:23:3.01:54,3,0	1/1:49,40:83:12.28:2545,12,0	1/1:13,17:28:33.04:531,33,0	0/1:7,13:19:9.95:277,0,10
chr10	56354592	.	CATACAT	C	1809.60	PASS	AB=0.973;AC=15;AF=0.268;AN=56;BaseQRankSum=9.098;DP=1112;FS=11.794;HRun=0;HaplotypeScore=283.7847;InbreedingCoeff=0.2697;MQ=41.89;MQ0=16;MQRankSum=-3.659;QD=3.95;ReadPosRankSum=-4.907;VQSLOD=0.5037;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:60.25:0,60,1942	0/0:22,0:22:48.13:0,48,1466	0/0:33,0:13:33.01:0,33,863	0/0:52,0:25:51.47:0,51,1565	0/0:31,0:31:90.12:0,90,2719	0/0:17,0:17:18.02:0,18,453	0/0:27,0:26:29.90:0,30,769	0/0:71,0:54:99:0,157,4587	0/1:34,1:35:33.40:80,0,33	0/1:79,5:77:99:622,0,1450	1/1:32,0:29:15.04:166,15,0	0/0:43,0:43:56.27:0,56,1471	0/0:44,0:44:99:0,126,4179	0/0:52,0:52:99:0,153,4763	0/1:43,1:41:17.16:87,0,17	0/0:41,0:40:44.41:0,44,920	0/0:23,0:22:7.26:0,7,522	0/0:20,0:20:17.25:0,17,568	0/1:15,0:12:67.92:68,0,243	1/1:40,4:44:9.01:91,9,0	1/1:43,0:37:5.92:48,6,0	0/0:48,0:46:68.38:0,68,1863	0/0:33,0:33:54.11:0,54,1333	0/0:49,0:49:48.09:0,48,1367	1/1:24,2:26:2.92:34,3,0	0/1:82,2:80:99:479,0,1071	0/1:28,0:26:99:146,0,163	0/1:20,0:19:99:155,0,112
chr10	56354604	.	TAC	T	177.58	PASS	AB=0.975;AC=12;AF=0.214;AN=56;BaseQRankSum=8.771;DP=1037;FS=0.000;HRun=0;HaplotypeScore=231.1149;InbreedingCoeff=0.2278;MQ=40.56;MQ0=16;MQRankSum=-5.060;QD=0.46;ReadPosRankSum=-5.350;VQSLOD=1.2600;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:58.85:0,59,1163	0/0:18,0:18:38.92:0,39,680	0/0:45,0:18:51.05:0,51,825	0/0:60,0:33:72.39:0,72,1112	0/0:32,0:32:93.18:0,93,1742	0/0:16,1:17:12.01:0,12,197	0/0:19,0:18:18.06:0,18,318	0/0:59,0:54:99:0,156,2854	0/0:33,0:32:1.97:0,2,17	0/1:77,3:74:99:128,0,719	1/1:29,3:30:1.83:4,2,0	0/0:37,2:38:5.87:0,6,617	0/0:49,0:49:99:0,138,2565	0/0:46,0:46:99:0,132,2495	1/1:42,0:40:2.35:6,2,0	0/0:33,2:34:20.82:0,21,396	0/1:19,1:19:16.24:16,0,209	0/0:14,0:14:15.51:0,16,197	0/0:8,0:8:8.87:0,9,100	1/1:48,1:49:0.47:1,0,0	0/1:30,1:29:0.07:0,0,0	0/0:46,2:46:2.30:0,2,766	0/0:29,0:29:16.62:0,17,551	0/0:39,0:39:36.10:0,36,649	0/1:25,0:25:0:0,0,0	0/1:75,3:75:99:125,0,609	0/1:27,0:25:7.13:7,0,41	0/0:18,0:17:7.19:0,7,82
chr10	56354609	.	ACACG	A	3651.40	PASS	AB=0.854;AC=20;AF=0.370;AN=54;BaseQRankSum=15.699;DP=1018;FS=2.756;HRun=0;HaplotypeScore=234.8822;InbreedingCoeff=0.1594;MQ=40.47;MQ0=14;MQRankSum=-11.810;QD=7.24;ReadPosRankSum=1.263;VQSLOD=2.7237;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:67.03:0,67,1656	0/0:17,0:17:33.11:0,33,892	0/0:44,1:18:54:0,54,1015	0/0:63,1:31:47.60:0,48,1165	0/0:33,0:33:96.31:0,96,2397	0/1:10,8:18:79.04:79,0,173	0/0:14,3:16:8.71:0,9,213	0/0:62,0:60:99:0,162,3543	0/0:29,6:34:0.91:0,1,4	1/1:68,10:73:40.33:1350,40,0	0/0:24,4:26:0:0,0,0	0/1:30,11:40:72.27:72,0,440	0/0:49,0:49:99:0,135,3462	0/0:46,0:46:99:0,135,3479	1/1:35,8:41:5.38:30,5,0	0/1:24,10:33:99:121,0,297	0/1:17,2:18:82.07:122,0,82	0/1:14,1:15:99:100,0,111	1/1:5,1:6:10.89:93,11,0	./.	0/1:25,2:25:0:0,0,0	0/1:35,10:43:60.21:60,0,499	0/1:21,6:27:99:161,0,288	0/1:36,1:37:57.24:57,0,481	0/0:21,6:27:0:0,0,0	1/1:59,12:67:55.09:1176,55,0	1/1:19,6:23:3.22:173,3,0	0/1:16,2:17:9.48:55,0,9
chr10	56354618	.	C	CAT	929.20	PASS	AB=0.901;AC=15;AF=0.288;AN=52;BaseQRankSum=3.322;DP=1024;FS=1.797;HRun=0;HaplotypeScore=220.0962;InbreedingCoeff=-0.2724;MQ=40.88;MQ0=17;MQRankSum=0.696;QD=2.04;ReadPosRankSum=-0.285;VQSLOD=2.4550;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:60.62:0,61,869	0/0:16,0:16:33.10:0,33,482	0/0:49,0:17:51.04:0,51,717	0/0:68,0:30:47.86:0,48,707	0/0:35,0:35:95.82:0,96,1424	0/1:16,2:18:43.85:44,0,116	0/1:12,5:16:39.89:40,0,185	0/0:54,0:53:99:0,150,2174	0/0:46,0:45:5.92:0,6,53	0/0:73,0:68:39.54:0,40,1674	./.	0/1:42,2:43:99:166,0,243	0/0:47,0:47:99:0,129,1922	0/0:53,0:52:99:0,154,2329	0/1:45,0:43:7.54:8,0,39	0/1:26,6:31:99:186,0,199	0/1:14,3:16:25.24:25,0,145	0/1:14,1:15:99:150,0,155	0/0:7,0:7:2.41:0,2,60	./.	0/1:24,1:22:0.01:0,0,0	0/1:26,15:39:99:138,0,162	0/1:18,9:27:99:162,0,119	0/1:30,6:36:99:125,0,118	0/1:31,0:31:0:0,0,0	0/1:65,3:66:15.46:15,0,1339	0/1:25,0:22:1.73:2,0,204	0/1:15,0:14:6.78:7,0,75
chr10	56354656	.	T	TAC	7204.33	PASS	AB=0.686;AC=15;AF=0.288;AN=52;BaseQRankSum=11.859;DP=1185;FS=20.256;HRun=0;HaplotypeScore=241.0558;InbreedingCoeff=0.8675;MQ=40.70;MQ0=24;MQRankSum=-15.939;QD=17.49;ReadPosRankSum=-1.365;VQSLOD=3.2129;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:50:61.78:0,62,803	0/0:13,0:13:18.04:0,18,218	0/0:46,1:11:20.88:0,21,237	0/0:71,0:13:14.59:0,15,232	0/0:43,0:43:99:0,111,1476	0/0:21,0:21:30.08:0,30,383	0/0:27,0:25:42.80:0,43,561	0/0:52,0:39:84.44:0,84,1023	1/1:6,51:57:5.67:69,6,0	1/1:26,53:74:99:2940,186,0	./.	0/0:56,0:55:99:0,102,1342	0/0:50,0:50:99:0,129,1699	0/0:54,0:53:99:0,141,1780	0/1:13,46:57:0.09:0,0,0	0/0:41,0:41:78.11:0,78,1021	0/0:23,0:23:30.96:0,31,384	0/0:20,0:20:54.17:0,54,696	1/1:6,4:8:11.75:159,12,0	./.	0/1:17,2:14:0:0,0,0	0/0:48,0:47:62.57:0,63,835	0/0:35,0:34:38.85:0,39,466	0/0:31,0:31:42.57:0,43,526	0/1:11,29:40:0:0,0,0	1/1:33,66:95:99:3351,221,0	1/1:8,22:30:30.10:512,30,0	1/1:5,9:14:12.34:172,12,0
chr10	56354668	.	T	TAC	9771.60	PASS	AB=0.844;AC=25;AF=0.463;AN=54;BaseQRankSum=3.500;DP=1241;FS=15.570;HRun=0;HaplotypeScore=233.3701;InbreedingCoeff=0.5765;MQ=40.13;MQ0=27;MQRankSum=-14.776;QD=15.34;ReadPosRankSum=-6.330;VQSLOD=2.3079;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:61.14:0,61,764	0/1:1,11:12:8.85:242,0,9	0/0:50,0:12:33.09:0,33,396	0/0:67,0:10:20.80:0,21,227	0/0:42,0:42:99:0,117,1523	0/0:25,0:25:22.41:0,22,68	0/1:32,0:30:49.24:49,0,79	1/1:31,26:35:60.10:1047,60,0	1/1:10,49:59:8.53:124,9,0	1/1:31,53:81:99:3138,178,0	1/1:8,20:28:6.02:99,6,0	0/0:64,0:62:61.52:0,62,218	0/0:51,0:51:99:0,129,1717	0/0:48,0:48:99:0,120,1547	1/1:20,40:58:9.02:120,9,0	0/0:45,0:44:58.94:0,59,180	0/1:26,0:25:27.23:33,0,27	0/1:23,0:23:48.48:48,0,63	0/1:8,6:10:1.71:254,0,2	1/1:13,50:63:3.01:48,3,0	1/1:25,5:23:6:76,6,0	0/0:56,0:54:44.18:0,44,136	0/0:36,0:34:25.33:0,25,76	0/0:32,0:32:37.63:0,38,131	./.	1/1:28,67:90:99:3544,164,0	1/1:8,24:31:36.12:606,36,0	1/1:12,10:22:6.12:344,6,0
chr10	56354674	.	CAT	C	8932.90	PASS	AB=0.899;AC=22;AF=0.407;AN=54;BaseQRankSum=1.277;DP=1268;FS=1.686;HRun=0;HaplotypeScore=228.8511;InbreedingCoeff=0.5448;MQ=40.67;MQ0=33;MQRankSum=6.110;QD=13.58;ReadPosRankSum=3.782;VQSLOD=4.7928;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:60.42:0,60,1074	0/0:12,0:12:17.98:0,18,165	0/0:48,0:12:32.89:0,33,486	0/0:57,0:8:18.95:0,19,345	0/0:43,0:43:99:0,123,2269	1/1:3,23:26:33.11:504,33,0	0/1:20,19:33:62.29:636,0,62	0/1:59,4:34:99:293,0,383	0/0:55,4:59:13.81:0,14,145	0/1:84,6:86:99:274,0,1387	0/0:26,3:29:12:0,12,127	1/1:5,59:62:99:1762,117,0	0/0:48,0:48:99:0,141,2585	0/0:46,0:46:99:0,132,2299	0/0:53,5:57:21:0,21,206	1/1:1,47:47:87.30:1330,87,0	1/1:16,15:30:47.89:621,48,0	1/1:3,22:25:54.01:956,54,0	0/0:14,1:11:8.91:0,9,168	0/0:65,5:70:21.02:0,21,276	0/0:37,0:27:17.85:0,18,238	1/1:1,52:51:67:1010,67,0	1/1:2,36:36:39.13:596,39,0	1/1:4,30:34:11.02:757,11,0	./.	0/1:87,8:89:99:175,0,1508	0/1:31,1:31:16.15:16,0,185	0/1:19,1:20:1.59:2,0,241
chr10	56354722	.	CAT	C	4436.83	PASS	AB=0.995;AC=20;AF=0.357;AN=56;BaseQRankSum=12.230;DP=1368;FS=29.631;HRun=0;HaplotypeScore=227.8164;InbreedingCoeff=0.8267;MQ=46.41;MQ0=42;MQRankSum=-0.467;QD=6.90;ReadPosRankSum=5.743;VQSLOD=2.8750;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:50:58.03:0,58,980	0/0:17,0:16:27.06:0,27,467	0/0:18,0:7:20.81:0,21,328	0/0:14,0:9:20.27:0,20,352	0/0:39,0:39:99:0,114,1952	0/0:26,0:26:51.17:0,51,972	0/0:36,0:30:38.21:0,38,758	0/0:102,0:65:99:0,113,2767	1/1:50,0:49:41.21:214,41,0	0/1:104,1:100:99:963,0,401	1/1:36,0:36:43.31:243,43,0	0/0:49,0:48:99:0,117,2026	0/0:51,0:51:99:0,138,2467	0/0:47,0:46:99:0,135,2452	1/1:65,0:65:63.25:329,63,0	0/0:61,0:60:99:0,147,2553	0/0:32,0:31:47.99:0,48,875	0/0:38,0:39:42.22:0,42,1617	1/1:32,1:22:61.39:398,61,0	1/1:67,0:66:48.90:255,49,0	1/1:76,3:66:59.58:400,60,0	0/0:60,0:58:90.25:0,90,1566	0/0:41,0:39:54.17:0,54,984	0/0:42,0:42:69.18:0,69,1188	1/1:48,0:46:31.59:163,32,0	0/1:94,0:88:99:864,0,169	1/1:31,0:27:21.94:225,22,0	1/1:34,1:35:6.24:384,6,0
chr10	56354724	.	TAC	T	11828.01	PASS	AB=0.582;AC=21;AF=0.375;AN=56;BaseQRankSum=10.310;DP=1362;FS=35.059;HRun=0;HaplotypeScore=201.6445;InbreedingCoeff=0.9224;MQ=46.65;MQ0=42;MQRankSum=-5.196;QD=18.48;ReadPosRankSum=3.959;VQSLOD=3.5077;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,3:50:51.74:0,52,848	0/0:17,0:16:24.06:0,24,404	0/0:22,0:8:24.02:0,24,332	0/0:15,0:9:23.26:0,23,339	0/0:39,0:39:99:0,105,1718	0/0:27,0:27:51.15:0,51,853	0/0:35,0:29:38.31:0,38,617	0/0:98,0:65:99:0,106,2416	1/1:11,39:49:43.02:561,43,0	0/1:29,74:99:99:2766,0,119	1/1:3,33:36:45.15:599,45,0	0/0:48,0:47:99:0,102,1649	0/0:48,0:48:99:0,129,2120	0/0:46,0:45:99:0,123,2090	1/1:11,51:62:66.22:879,66,0	0/0:61,0:60:99:0,126,2089	0/0:28,4:32:45.11:0,45,749	0/0:39,1:40:22.98:0,23,1476	1/1:12,21:22:63.19:822,63,0	1/1:10,56:65:51.17:679,51,0	1/1:33,47:67:87.23:1124,87,0	0/0:60,0:58:78.25:0,78,1304	0/0:40,0:38:57.18:0,57,942	0/0:38,4:42:66.23:0,66,1106	1/1:12,34:44:33.11:439,33,0	1/1:18,74:86:47.39:2329,47,0	1/1:9,24:29:45.11:597,45,0	1/1:7,32:39:30.40:1033,30,0
chr10	56354732	.	CAT	C	4050.59	PASS	AB=1.000;AC=16;AF=0.286;AN=56;BaseQRankSum=16.269;DP=1350;FS=24.301;HRun=0;HaplotypeScore=213.7014;InbreedingCoeff=0.4799;MQ=48.26;MQ0=30;MQRankSum=-3.142;QD=6.30;ReadPosRankSum=8.069;VQSLOD=1.5633;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:46,1:47:53.79:0,54,918	0/0:15,0:14:24.05:0,24,389	0/0:33,0:13:30.01:0,30,413	0/0:22,0:12:29.30:0,29,475	0/0:37,0:37:99:0,102,1723	0/0:28,0:28:48.16:0,48,840	0/0:35,0:29:47.49:0,47,670	0/0:87,2:68:96.18:0,96,2542	1/1:47,0:46:20.14:187,20,0	0/1:113,0:109:99:894,0,374	1/1:36,0:36:43.25:229,43,0	0/0:45,0:44:99:0,99,1693	0/0:47,0:47:99:0,116,2082	0/0:46,0:45:99:0,126,2226	0/1:64,0:64:16.61:256,0,17	0/0:58,0:58:99:0,126,2193	0/0:27,1:28:42.13:0,42,758	0/0:41,0:41:66.71:0,67,1668	1/1:31,0:23:36.84:336,37,0	1/1:56,0:55:48.90:255,49,0	1/1:80,0:69:21.28:355,21,0	0/0:54,0:52:78.19:0,78,1281	0/0:42,0:40:63.19:0,63,1048	0/0:40,0:40:66.23:0,66,1178	0/1:47,0:45:34.30:125,0,34	0/1:90,0:85:99:870,0,124	0/1:35,0:31:13.26:205,0,13	0/1:44,0:44:72.27:338,0,72
chr10	56354930	.	TATAC	T	16018.81	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=16.705;DP=1361;FS=5.030;HRun=0;HaplotypeScore=214.2523;InbreedingCoeff=0.9991;MQ=50.38;MQ0=19;MQRankSum=1.382;QD=25.11;ReadPosRankSum=6.382;VQSLOD=4.1973;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:27.82:0,28,540	0/0:14,0:14:27.09:0,27,582	0/0:28,0:13:36.10:0,36,730	0/0:35,0:11:23.97:0,24,434	0/0:32,0:32:78.25:0,78,1849	0/0:30,0:30:57.20:0,57,1392	0/0:46,0:41:69.18:0,69,1586	0/0:101,0:70:99:0,159,3017	1/1:14,56:69:98.59:1674,99,0	1/1:66,51:109:99:3589,196,0	1/1:3,26:29:27.09:463,27,0	0/0:45,0:45:99:0,102,2385	0/0:58,0:58:99:0,138,3290	0/0:58,0:58:99:0,163,3796	1/1:10,51:61:81.28:1390,81,0	0/0:58,1:58:89.93:0,90,3049	0/0:44,0:44:74.40:0,74,1757	0/0:25,0:25:40.05:0,40,944	1/1:14,20:26:57.61:903,58,0	1/1:15,44:59:48.16:824,48,0	1/1:44,37:74:99:2435,147,0	0/0:37,0:37:75.06:0,75,1674	0/0:40,0:40:81.28:0,81,1833	0/0:40,0:40:63.20:0,63,1472	1/1:17,14:30:26.52:428,27,0	1/1:14,72:83:99:2746,186,0	1/1:3,42:45:57.11:908,57,0	1/1:10,15:25:42.09:659,42,0
chr10	56354942	.	CAT	C	3230.05	PASS	AB=1.000;AC=16;AF=0.286;AN=56;BaseQRankSum=22.977;DP=1379;FS=7.238;HRun=0;HaplotypeScore=214.4514;InbreedingCoeff=0.4503;MQ=50.18;MQ0=19;MQRankSum=0.470;QD=5.21;ReadPosRankSum=8.934;VQSLOD=1.2276;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:28.20:0,28,534	0/0:13,0:13:30.07:0,30,490	0/0:51,2:20:59.84:0,60,935	0/0:55,1:15:35.82:0,36,507	0/0:29,0:29:87.28:0,87,1604	0/0:31,0:31:69.22:0,69,1259	0/0:44,0:38:78.20:0,78,1396	0/0:93,0:76:99:0,213,3300	0/1:67,0:64:37.34:311,0,37	0/1:108,0:102:99:804,0,108	0/1:29,0:29:11.21:85,0,11	0/0:43,0:43:99:0,105,1884	0/0:55,0:55:99:0,159,2884	0/0:61,0:61:99:0,184,3250	1/1:57,0:57:24.31:281,24,0	0/0:61,0:60:99:0,147,2681	0/0:43,4:47:86.56:0,87,1537	0/0:22,0:22:6.68:0,7,731	0/1:28,0:22:18.29:175,0,18	1/1:53,0:54:8.01:161,8,0	1/1:78,1:73:15.51:505,16,0	0/0:41,0:41:89.95:0,90,1580	0/0:39,0:39:90.31:0,90,1695	0/0:38,1:39:69.22:0,69,1248	1/1:35,0:34:26.70:126,27,0	1/1:83,0:81:14.63:663,15,0	0/1:48,0:47:33.25:172,0,33	0/1:32,0:32:99:132,0,168
chr10	56355030	.	TACATACACAC	T	2389.96	PASS	AB=0.806;AC=9;AF=0.196;AN=46;BaseQRankSum=-1.371;DP=1454;FS=4.043;HRun=0;HaplotypeScore=294.2585;InbreedingCoeff=0.4825;MQ=48.36;MQ0=62;MQRankSum=-3.776;QD=8.18;ReadPosRankSum=-5.408;VQSLOD=1.1602;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:48:79.12:0,79,3069	0/1:3,12:13:0:0,0,0	./.	./.	0/0:41,0:40:99:0,105,3226	./.	1/1:42,7:35:18.04:378,18,0	0/1:115,0:48:99:579,0,138	0/0:79,0:75:99:0,136,4954	0/0:115,0:105:99:0,235,8208	0/0:43,0:42:69.24:0,69,2555	0/1:9,32:38:0.02:0,0,0	0/0:59,0:59:99:0,144,5159	0/0:52,0:52:99:0,132,4309	0/0:67,0:66:99:0,138,4960	0/0:13,40:49:3.01:0,3,151	1/1:24,2:25:30.10:631,30,0	0/1:27,1:27:35.09:792,0,35	0/0:53,0:25:63.22:0,63,1860	0/0:46,0:45:48.16:0,48,1340	0/0:118,0:111:99:0,163,5409	./.	./.	0/1:17,1:18:7.96:142,0,8	0/0:48,0:48:84.26:0,84,2925	0/0:90,0:84:99:0,202,7145	0/0:30,0:30:58.04:0,58,2279	0/0:41,0:41:99:0,100,3423
chr10	56355124	.	TAC	T	252.55	PASS	AB=0.989;AC=8;AF=0.143;AN=56;BaseQRankSum=17.649;DP=1242;FS=12.799;HRun=0;HaplotypeScore=211.5535;InbreedingCoeff=0.0892;MQ=46.59;MQ0=38;MQRankSum=-5.018;QD=0.74;ReadPosRankSum=2.263;VQSLOD=1.6641;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:70.61:0,71,1179	1/1:11,0:10:8.03:25,8,0	0/0:32,1:12:23.67:0,24,354	0/0:32,0:14:32.10:0,32,460	0/0:39,0:38:99:0,99,1704	0/0:28,0:27:54.19:0,54,958	0/0:41,2:37:59.99:0,60,1019	0/0:87,0:50:55.32:0,55,828	0/0:63,0:60:10.87:0,11,314	0/1:100,1:87:99:163,0,572	0/0:35,0:35:14.23:0,14,249	0/0:32,1:33:79.74:0,80,1324	0/0:52,0:52:99:0,138,2365	0/0:44,0:45:99:0,123,2078	0/1:54,1:54:4.70:5,0,240	0/0:48,0:47:99:0,114,1975	0/0:31,0:31:35.22:0,35,802	0/0:28,0:28:76.45:0,76,1262	0/1:25,1:12:17.75:18,0,61	0/1:46,0:44:1.13:1,0,39	0/0:68,0:63:2.44:0,2,248	0/0:41,0:43:99:0,99,1756	0/0:40,0:40:87.30:0,87,1532	0/0:42,0:42:72.23:0,72,1195	0/0:52,0:51:25.30:0,25,383	0/1:61,0:58:99:148,0,133	0/1:40,0:39:19.19:19,0,209	0/0:17,0:16:4:0,4,130
chr10	56355128	.	CACAT	C	11463.17	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=13.402;DP=1236;FS=0.296;HRun=0;HaplotypeScore=206.8888;InbreedingCoeff=0.9678;MQ=46.56;MQ0=36;MQRankSum=-9.905;QD=17.13;ReadPosRankSum=-4.221;VQSLOD=3.8628;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:43:66.42:0,66,1509	1/1:8,4:11:18.06:299,18,0	0/0:32,0:11:18.50:0,19,251	0/0:26,0:14:20.84:0,21,162	0/0:34,0:33:90.23:0,90,1966	0/0:27,0:27:57.11:0,57,1160	0/0:43,0:37:54.09:0,54,1161	1/1:74,12:50:14.30:1110,14,0	1/1:37,28:62:50.70:744,51,0	1/1:55,43:85:99:2961,178,0	1/1:14,19:33:17.95:253,18,0	0/0:34,0:34:77.25:0,77,1728	0/0:50,0:50:99:0,126,2726	0/0:47,0:47:99:0,126,2591	1/1:35,23:57:45.11:681,45,0	0/0:47,0:47:99:0,117,2528	0/0:32,0:32:51.80:0,52,1162	0/0:27,0:27:51.82:0,52,1225	1/1:22,6:12:30.07:440,30,0	1/1:6,40:44:2.70:52,3,0	1/1:60,11:66:57.17:869,57,0	0/0:42,0:42:99:0,102,2395	0/0:42,0:42:99:0,99,2154	0/0:39,0:40:69.18:0,69,1404	1/1:27,24:49:36.95:489,37,0	1/1:30,34:60:99:2587,157,0	1/1:21,21:41:42.11:653,42,0	1/1:9,5:13:21.07:323,21,0
chr10	56355130	.	CAT	C	1819.12	PASS	AB=0.990;AC=15;AF=0.268;AN=56;BaseQRankSum=16.917;DP=1234;FS=7.824;HRun=0;HaplotypeScore=205.0696;InbreedingCoeff=-0.1671;MQ=46.59;MQ0=36;MQRankSum=-8.752;QD=2.62;ReadPosRankSum=-0.189;VQSLOD=1.4352;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:41:74.14:0,74,1342	1/1:12,0:11:16.01:79,16,0	0/0:31,0:12:36.02:0,36,489	0/0:25,1:14:30.04:0,30,442	0/0:34,0:33:99:0,99,1850	0/0:28,0:28:57.17:0,57,1064	0/0:44,0:38:66.02:0,66,1159	0/1:83,1:49:99:116,0,581	0/1:62,1:60:85.26:85,0,200	0/1:96,3:85:99:590,0,295	0/1:31,0:31:22.59:23,0,193	0/0:34,0:34:78.01:0,78,1513	0/0:51,0:51:99:0,141,2559	0/0:48,0:48:99:0,141,2422	0/1:58,0:57:99:141,0,180	0/0:46,0:46:99:0,120,2197	0/1:30,1:31:4.49:4,0,897	0/0:27,0:27:60.23:0,60,1309	0/1:30,0:14:29.74:108,0,30	0/1:43,0:41:6.39:6,0,19	0/1:73,0:68:60.91:127,0,61	0/0:40,0:40:99:0,102,1934	0/0:45,0:45:99:0,108,1872	0/0:42,0:42:78.23:0,78,1402	0/1:52,0:50:99:115,0,209	0/1:64,0:60:31.07:430,0,31	0/1:39,2:40:99:128,0,109	0/1:14,0:13:28.01:28,0,79
chr10	56355138	.	CAT	C	2036.40	PASS	AB=0.992;AC=14;AF=0.250;AN=56;BaseQRankSum=20.448;DP=1225;FS=7.613;HRun=0;HaplotypeScore=199.7024;InbreedingCoeff=-0.1391;MQ=46.47;MQ0=27;MQRankSum=-6.718;QD=3.09;ReadPosRankSum=0.733;VQSLOD=2.0354;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:43,1:43:86.61:0,87,1599	0/1:10,0:10:34.12:40,0,34	0/0:34,0:16:44.55:0,45,561	0/0:22,0:13:32.88:0,33,330	0/0:34,0:33:96.23:0,96,1724	0/0:23,0:23:57.16:0,57,1022	0/0:37,0:34:65.83:0,66,1198	0/1:79,2:46:99:267,0,242	0/1:61,0:59:92.39:205,0,92	0/1:98,1:83:99:513,0,161	0/1:33,0:33:24.50:25,0,154	0/0:34,0:34:89:0,89,1584	0/0:55,0:55:99:0,153,2710	0/0:49,0:49:99:0,141,2477	0/1:57,0:57:81.32:81,0,116	0/0:47,0:47:99:0,129,2324	0/0:32,1:33:60.85:0,61,1086	0/0:28,0:28:63.20:0,63,1153	0/1:31,0:16:89.54:95,0,90	0/1:46,0:43:3.41:3,0,55	0/1:69,0:65:54.90:192,0,55	0/0:38,0:39:99:0,111,2072	0/0:44,0:44:99:0,114,2073	0/0:42,0:42:78.20:0,78,1366	0/1:50,0:48:99:124,0,171	0/1:68,0:64:99:486,0,131	0/1:38,1:38:95.63:121,0,96	1/1:12,0:11:11.92:44,12,0
chr10	56356083	.	TACACACAC	T	1840.60	PASS	AC=18;AF=0.360;AN=50;BaseQRankSum=7.160;DP=535;FS=3.847;HRun=0;HaplotypeScore=131.8182;InbreedingCoeff=0.8553;MQ=67.79;MQ0=9;MQRankSum=-8.068;QD=11.36;ReadPosRankSum=1.693;VQSLOD=2.3640;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:48.11:0,48,1409	./.	./.	./.	0/0:21,0:21:27.09:0,27,917	1/1:8,10:18:24.08:583,24,0	1/1:8,7:15:2.85:75,3,0	0/0:17,0:16:16.87:0,17,377	0/0:10,0:11:21.07:0,21,591	0/0:12,0:12:9.03:0,9,228	0/0:14,0:14:21.07:0,21,697	1/1:12,7:19:15.05:339,15,0	0/0:13,0:13:18.06:0,18,514	0/0:9,0:9:15.05:0,15,455	0/0:20,0:20:21.07:0,21,639	1/1:10,6:17:12.04:282,12,0	1/1:14,12:24:9.03:188,9,0	1/1:6,5:12:11.93:229,12,0	0/0:13,0:11:15.05:0,15,430	0/0:21,0:22:21.07:0,21,595	0/0:64,0:66:96.27:0,96,2957	1/1:9,5:14:6.02:151,6,0	1/1:12,4:16:6.02:151,6,0	1/1:16,8:24:3:25,3,0	0/0:17,0:20:21.07:0,21,610	0/0:18,0:18:33.09:0,33,828	0/0:16,0:16:27.09:0,27,784	0/0:10,0:9:15.05:0,15,615
chr10	56356625	.	G	GCATACAAACAA	19998.85	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-11.834;DP=921;FS=8.865;HRun=0;HaplotypeScore=248.4211;InbreedingCoeff=0.9803;MQ=67.44;MQ0=0;MQRankSum=-10.313;QD=50.50;ReadPosRankSum=-3.922;VQSLOD=2.2505;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,99,2571	0/0:6,0:6:18.03:0,18,451	0/0:36,0:36:10.16:0,10,459	0/0:23,0:23:23.91:0,24,357	0/0:30,0:30:54.04:0,54,1304	0/0:20,0:20:32.35:0,32,965	0/0:32,0:32:60.09:0,60,1358	0/0:43,0:43:78.17:0,78,1270	1/1:13,19:42:42.14:2219,42,0	1/1:19,31:61:99:3149,101,0	1/1:9,18:33:47.88:1824,48,0	0/0:35,0:35:63.20:0,63,1802	0/0:26,0:26:57.15:0,57,1576	0/0:25,0:25:57.18:0,57,1620	1/1:11,22:40:33.11:1786,33,0	0/0:24,0:24:54.14:0,54,1521	0/0:35,0:35:63.18:0,63,1662	0/0:24,0:24:48.12:0,48,1332	1/1:12,5:22:29.96:936,30,0	1/1:8,20:38:33.08:1370,33,0	1/1:35,0:35:29.66:405,30,0	0/0:45,0:45:87.29:0,87,2633	0/0:49,0:49:90.22:0,90,2369	0/0:26,0:26:57.10:0,57,1423	1/1:4,14:21:30.10:1623,30,0	1/1:11,26:52:99:4116,114,0	1/1:9,18:40:13.86:2082,14,0	1/1:2,3:11:9.03:488,9,0
chr10	56357581	.	TG	T	3973.25	PASS	AB=0.812;AC=28;AF=0.500;AN=56;BaseQRankSum=-1.748;DP=510;FS=2.841;HRun=10;HaplotypeScore=71.2500;InbreedingCoeff=0.7129;MQ=80.86;MQ0=0;MQRankSum=-1.240;QD=15.11;ReadPosRankSum=7.127;VQSLOD=3.9592;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:34,2:36:11.08:0,11,578	0/0:3,0:7:8.60:0,9,65	0/0:29,0:29:18.15:0,18,253	0/0:14,0:13:10.10:0,10,61	0/1:13,3:16:36.63:37,0,289	0/0:16,0:16:14.62:0,15,91	0/0:16,0:18:16.31:0,16,79	0/0:13,0:17:20.75:0,21,122	1/1:6,14:21:50.01:421,50,0	1/1:6,12:19:34.99:292,35,0	1/1:4,6:10:17.98:156,18,0	0/0:17,0:17:16.57:0,17,83	0/0:16,0:16:10.05:0,10,323	0/1:13,5:18:42.08:42,0,254	1/1:2,16:18:44.99:391,45,0	0/0:4,0:11:2.88:0,3,15	0/0:30,0:30:4.71:0,5,29	0/0:12,0:24:11.59:0,12,66	1/1:4,9:14:28.99:236,29,0	1/1:2,19:22:52.98:441,53,0	1/1:5,29:35:83.01:709,83,0	1/1:6,0:13:2.52:4,3,0	1/1:5,0:5:0.47:1,0,0	0/0:11,0:12:5.95:0,6,43	1/1:4,12:16:35.98:312,36,0	1/1:9,11:20:12.08:331,12,0	1/1:8,15:23:41.97:365,42,0	1/1:4,9:13:26.99:234,27,0
chr10	56358111	.	C	CAT	388.32	PASS	AB=0.920;AC=10;AF=0.500;AN=20;BaseQRankSum=-1.193;DP=138;FS=1.718;HRun=0;HaplotypeScore=21.0344;InbreedingCoeff=0.2219;MQ=85.36;MQ0=0;MQRankSum=-0.416;QD=5.39;ReadPosRankSum=-1.193;VQSLOD=1.5873;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:9,6:17:13.06:241,0,13	./.	0/0:11,0:8:3.01:0,3,32	0/0:9,0:4:0.24:0,0,0	1/1:10,2:12:6.02:94,6,0	./.	./.	1/1:7,0:7:8.92:64,9,0	./.	0/1:7,0:7:0:0,0,0	./.	./.	0/1:6,0:9:32.28:32,0,83	0/0:5,0:5:12.04:0,12,140	./.	./.	1/1:15,0:15:5.98:46,6,0	0/1:5,0:5:0:0,0,0	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.
chr10	56358928	.	AT	A	13345.46	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=4.853;DP=581;FS=1.286;HRun=5;HaplotypeScore=59.8115;InbreedingCoeff=0.9716;MQ=59.32;MQ0=2;MQRankSum=1.291;QD=29.86;ReadPosRankSum=1.821;VQSLOD=5.4001;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,108,1461	1/1:0,7:7:21.06:238,21,0	0/0:17,0:10:24.05:0,24,300	0/0:22,0:16:42.10:0,42,520	0/0:19,0:19:57.19:0,57,779	1/1:0,12:12:33.09:374,33,0	1/1:0,19:19:48.14:544,48,0	1/1:1,14:14:36.09:398,36,0	1/1:0,12:12:36.10:408,36,0	1/1:0,26:26:75.21:850,75,0	1/1:1,11:12:30.08:340,30,0	1/1:2,17:19:48.14:544,48,0	0/0:21,0:21:54.15:0,54,718	0/0:16,0:16:45.11:0,45,578	1/1:1,19:20:54.15:612,54,0	1/1:0,18:18:48.14:544,48,0	1/1:1,33:33:90.26:1021,90,0	1/1:1,38:39:99:1224,108,0	1/1:5,14:16:4.61:436,5,0	1/1:1,21:22:60.17:680,60,0	1/1:0,35:35:96.27:1089,96,0	1/1:2,16:18:39.11:439,39,0	1/1:2,14:16:42.12:473,42,0	1/1:1,33:34:90.26:1021,90,0	1/1:1,20:21:51.14:577,51,0	1/1:1,19:19:54.15:612,54,0	1/1:1,17:18:48.14:544,48,0	1/1:0,11:11:33.09:374,33,0
chr10	56359102	.	GA	G	1082.95	PASS	AB=0.809;AC=41;AF=0.759;AN=54;BaseQRankSum=1.635;DP=426;FS=2.448;HRun=16;HaplotypeScore=60.0058;InbreedingCoeff=0.2802;MQ=41.14;MQ0=37;MQRankSum=-0.795;QD=2.96;ReadPosRankSum=3.103;VQSLOD=-0.6754;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:24,3:25:23.59:24,0,35	1/1:5,4:9:5.80:36,6,0	./.	0/0:8,0:2:3:0,3,25	0/0:22,0:25:35.64:0,36,261	0/1:5,3:8:5.16:42,0,5	1/1:9,3:11:5.67:35,6,0	0/1:11,7:12:35.81:36,0,71	0/1:6,0:6:1.45:1,0,9	1/1:8,0:15:16.21:47,16,0	1/1:6,0:12:11.88:34,12,0	1/1:7,3:10:5.70:36,6,0	0/1:11,1:12:22.12:22,0,94	0/0:17,0:18:22.02:0,22,145	1/1:3,0:11:8.13:23,8,0	0/1:10,4:13:7.96:61,0,8	1/1:19,13:28:19.99:217,20,0	1/1:16,7:16:24.52:137,25,0	1/1:9,0:8:6.96:19,7,0	1/1:4,0:11:9.90:29,10,0	1/1:4,1:8:7:30,7,0	0/1:10,0:10:0.59:1,0,14	1/1:11,7:18:22.53:131,23,0	1/1:5,11:16:23.40:143,23,0	1/1:8,0:11:8.97:25,9,0	1/1:7,0:17:16.25:47,16,0	1/1:7,0:19:12.85:52,13,0	1/1:10,0:5:4.04:12,4,0
chr10	56360415	.	CCACA	C	349.17	PASS	AB=0.893;AC=15;AF=0.375;AN=40;BaseQRankSum=1.226;DP=496;FS=26.956;HRun=0;HaplotypeScore=79.4677;InbreedingCoeff=0.1448;MQ=56.44;MQ0=17;MQRankSum=0.507;QD=2.16;ReadPosRankSum=0.528;VQSLOD=0.0669;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:34:27.09:0,27,478	1/1:5,0:6:2.70:28,3,0	./.	./.	0/0:13,0:19:3.01:0,3,66	./.	0/1:27,3:30:39.86:40,0,63	./.	0/0:13,0:13:3.01:0,3,41	0/0:26,0:26:4.25:0,4,31	0/1:12,0:11:17.05:17,0,45	1/1:6,0:8:3:28,3,0	0/0:11,0:10:3.48:0,3,71	0/0:13,0:14:14.24:0,14,240	0/1:8,0:10:6.45:22,0,6	0/0:13,0:13:3.01:0,3,41	0/0:23,0:26:11.23:0,11,60	0/1:18,1:22:25.72:34,0,26	./.	./.	0/0:32,0:30:5.23:0,5,48	1/1:16,0:15:3.01:46,3,0	1/1:10,2:12:3.01:46,3,0	1/1:21,4:24:11.77:182,12,0	./.	0/1:18,2:20:6.42:37,0,6	0/0:8,0:9:3.22:0,3,13	./.
chr10	56360780	.	GCA	G	1360.28	PASS	AB=0.849;AC=15;AF=0.268;AN=56;BaseQRankSum=-6.315;DP=548;FS=0.551;HRun=0;HaplotypeScore=102.4703;InbreedingCoeff=0.5289;MQ=69.23;MQ0=17;MQRankSum=6.079;QD=7.86;ReadPosRankSum=3.081;VQSLOD=2.9254;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:25.47:0,25,430	0/0:8,0:8:15.53:0,16,97	0/0:34,0:20:23.86:0,24,202	0/0:24,0:16:10.07:0,10,115	0/0:9,0:9:17.98:0,18,168	1/1:18,0:18:5.51:157,6,0	1/1:24,0:24:47.95:404,48,0	0/0:29,0:28:63.50:0,63,472	0/0:10,0:16:5.99:0,6,48	0/0:23,0:21:49.43:0,49,395	0/0:9,0:12:2.79:0,3,19	0/1:14,0:14:36.83:179,0,37	0/0:18,0:18:17.85:0,18,302	0/0:17,0:17:15.11:0,15,281	0/0:16,0:23:2.88:0,3,15	1/1:13,0:12:26.75:220,27,0	0/1:5,24:29:1.84:132,0,2	1/1:4,14:18:3.01:37,3,0	0/0:24,0:23:27.16:0,27,201	0/0:10,0:10:6.01:0,6,67	0/0:9,0:11:2.96:0,3,19	1/1:17,0:17:8.99:202,9,0	1/1:18,0:17:4.18:165,4,0	0/1:22,0:22:23.68:35,0,24	0/0:12,0:9:2.99:0,3,24	0/0:27,0:24:47.67:0,48,433	0/0:21,0:24:27.81:0,28,212	0/0:13,0:13:30.20:0,30,266
chr10	56360795	.	C	CAG	260.71	PASS	AB=0.941;AC=16;AF=0.286;AN=56;BaseQRankSum=3.243;DP=538;FS=4.937;HRun=0;HaplotypeScore=117.1428;InbreedingCoeff=0.0987;MQ=54.44;MQ0=24;MQRankSum=1.164;QD=1.27;ReadPosRankSum=1.032;VQSLOD=1.7257;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:47:84.67:0,85,1091	0/1:7,0:7:7.18:7,0,8	0/0:23,0:10:23.96:0,24,270	0/1:16,0:9:0.04:0,0,166	0/0:11,0:10:18.06:0,18,253	1/1:22,0:21:4.74:170,5,0	1/1:19,0:19:0.03:8,0,0	0/0:27,0:26:16:0,16,124	0/1:17,0:17:14.05:14,0,55	0/0:23,0:21:40:0,40,252	1/1:13,0:11:2.22:7,2,0	0/1:15,0:14:14.27:14,0,50	0/0:20,0:20:23.92:0,24,592	0/0:17,0:17:30.68:0,31,462	1/1:19,0:18:0.89:2,1,0	0/1:16,1:16:11.16:89,0,11	0/0:31,0:31:29.51:0,30,201	0/0:21,0:21:14.93:0,15,119	0/0:18,0:17:30.85:0,31,202	0/0:11,0:11:4.99:0,5,23	0/0:14,0:11:2.82:0,3,19	0/0:13,0:13:4.81:0,5,62	0/1:16,0:15:33.50:34,0,56	0/1:8,19:29:30.61:31,0,55	0/0:14,0:11:4.93:0,5,26	0/0:27,0:24:33.74:0,34,223	0/1:16,0:16:21.76:24,0,22	0/0:14,0:12:14.70:0,15,98
chr10	56361086	.	G	GT	9550.31	PASS	AB=0.640;AC=39;AF=0.696;AN=56;BaseQRankSum=-10.868;DP=553;FS=11.460;HRun=10;HaplotypeScore=55.2144;InbreedingCoeff=0.4193;MQ=65.82;MQ0=1;MQRankSum=-0.885;QD=20.90;ReadPosRankSum=0.131;VQSLOD=5.0103;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:23:60.96:0,61,473	0/1:1,7:8:3.59:171,0,4	0/0:18,0:14:21.58:0,22,156	0/1:7,0:6:6.11:6,0,45	0/0:25,0:29:63.01:0,63,486	1/1:3,29:33:87.15:912,87,0	1/1:4,19:23:1.86:431,2,0	1/1:10,28:40:50.06:845,50,0	1/1:2,11:13:27.07:287,27,0	1/1:6,23:30:7.16:661,7,0	1/1:3,20:23:48.09:499,48,0	1/1:1,6:7:18.05:192,18,0	0/0:11,0:11:29.96:0,30,246	0/0:14,0:15:43.99:0,44,351	1/1:5,21:26:13.87:552,14,0	1/1:0,9:9:21.05:224,21,0	0/1:6,28:34:14.35:684,0,14	0/1:6,13:20:13.42:243,0,13	1/1:4,18:22:32.49:533,32,0	1/1:4,16:21:23.31:437,23,0	0/1:6,6:12:25.22:168,0,25	0/1:4,10:14:30.06:239,0,30	1/1:2,16:18:42.58:448,43,0	1/1:3,11:14:27.07:288,27,0	1/1:4,17:21:23.48:455,23,0	1/1:5,17:22:29.41:482,29,0	1/1:3,18:20:45.10:480,45,0	0/1:4,15:18:9.13:313,0,9
chr10	56362289	.	GA	G	1268.72	PASS	AB=0.904;AC=27;AF=0.482;AN=56;BaseQRankSum=-0.797;DP=456;FS=5.556;HRun=13;HaplotypeScore=66.0114;InbreedingCoeff=0.5323;MQ=47.57;MQ0=19;MQRankSum=-0.457;QD=5.16;ReadPosRankSum=-1.820;VQSLOD=1.6341;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:49.74:0,50,469	0/0:8,0:8:18.03:0,18,174	0/1:30,0:6:0.28:9,0,0	0/1:19,0:7:0.55:1,0,36	0/0:16,0:16:18.03:0,18,172	0/1:14,1:14:3.92:4,0,88	0/0:16,1:17:11.12:0,11,200	0/0:26,0:26:34.98:0,35,446	1/1:7,5:9:12.50:90,12,0	1/1:6,16:22:30.58:212,31,0	1/1:4,9:12:20.10:138,20,0	0/0:13,0:12:24.70:0,25,162	0/0:11,1:12:4.96:0,5,187	0/0:17,1:18:5.54:0,6,130	1/1:9,0:9:15.49:87,15,0	0/0:10,0:9:9:0,9,92	0/0:35,1:35:30.46:0,30,355	0/1:14,1:14:22.06:22,0,72	0/1:9,14:22:25.40:190,0,25	1/1:4,11:15:23.75:168,24,0	1/1:2,5:7:4.14:40,4,0	0/1:10,1:11:4.17:4,0,93	0/1:10,1:10:3.67:4,0,96	0/0:24,0:24:11.67:0,12,190	1/1:5,6:10:12.85:105,13,0	1/1:7,9:15:29.87:204,30,0	1/1:8,4:10:20.65:145,21,0	1/1:3,1:3:5.91:39,6,0
chr10	56362303	.	GA	G	1796.86	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-0.128;DP=498;FS=5.346;HRun=13;HaplotypeScore=69.5967;InbreedingCoeff=0.8808;MQ=51.78;MQ0=22;MQRankSum=2.334;QD=12.31;ReadPosRankSum=3.664;VQSLOD=3.8589;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,1:27:44.39:0,44,483	0/0:7,1:8:1.97:0,2,166	0/0:46,0:11:1.25:0,1,70	0/0:38,0:10:16.75:0,17,112	0/0:11,1:13:21.06:0,21,232	1/1:3,10:12:18.31:149,18,0	1/1:13,6:19:41.78:334,42,0	0/0:34,0:34:86.71:0,87,924	0/0:13,0:11:19.47:0,19,130	0/0:23,0:23:49.86:0,50,476	0/0:13,0:13:17.97:0,18,163	1/1:13,2:14:1.92:184,2,0	0/0:12,0:12:26.30:0,26,226	0/0:17,0:17:23.29:0,23,208	0/0:9,0:9:15.50:0,15,111	1/1:9,5:13:26.95:228,27,0	1/1:15,14:28:43.69:430,44,0	1/1:7,7:13:24.59:195,25,0	0/0:23,0:23:58.61:0,59,497	0/0:12,0:12:21.12:0,21,151	0/0:8,0:8:11.80:0,12,96	1/1:0,12:12:14.85:120,15,0	1/1:0,9:9:20.03:171,20,0	1/1:7,14:21:23.83:190,24,0	0/0:13,0:12:26.70:0,27,236	0/0:20,1:20:22.65:0,23,402	0/0:11,0:10:21.40:0,21,138	0/0:9,0:7:15.01:0,15,148
chr10	56362322	.	A	AGT	1388.46	PASS	AB=0.864;AC=17;AF=0.405;AN=42;BaseQRankSum=-2.789;DP=494;FS=9.997;HRun=0;HaplotypeScore=95.1229;InbreedingCoeff=-0.2813;MQ=55.13;MQ0=22;MQRankSum=0.811;QD=5.76;ReadPosRankSum=1.033;VQSLOD=2.4162;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:8.84:0,9,70	./.	./.	./.	0/0:9,0:9:2.99:0,3,25	0/0:16,1:17:3:0,3,32	1/1:11,5:17:3.96:207,4,0	./.	0/1:12,4:15:17.11:162,0,17	./.	./.	0/1:9,0:12:20.14:66,0,20	0/0:10,0:10:12.03:0,12,128	0/0:8,0:10:8.69:0,9,60	0/1:6,2:9:23.13:80,0,23	0/1:5,4:9:23.38:79,0,23	0/1:25,5:32:77.45:245,0,77	0/1:11,5:17:19.73:246,0,20	0/1:20,1:21:22.53:74,0,23	0/0:14,0:13:3.01:0,3,32	0/1:31,0:28:29.60:30,0,68	./.	0/0:8,0:9:5.06:0,5,20	0/1:17,1:18:32.13:32,0,84	0/1:13,2:15:46.20:115,0,46	1/1:23,0:23:3.85:22,4,0	1/1:6,4:10:9.03:133,9,0	0/1:9,0:10:32.77:33,0,37
chr10	56365343	.	CA	C	5875.60	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=5.441;DP=640;FS=13.470;HRun=15;HaplotypeScore=97.4159;InbreedingCoeff=0.9279;MQ=57.70;MQ0=23;MQRankSum=2.995;QD=12.66;ReadPosRankSum=2.312;VQSLOD=3.5008;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:25:55.86:0,56,272	0/0:8,0:8:22.20:0,22,110	0/0:28,0:9:2.60:0,3,10	0/0:24,1:9:5.24:0,5,70	0/0:30,0:28:58.10:0,58,301	1/1:6,14:20:36.31:222,36,0	1/1:5,17:22:20.23:286,20,0	0/0:28,0:28:35.68:0,36,209	1/1:4,8:12:19.52:147,20,0	1/1:8,22:30:65.58:420,66,0	1/1:11,22:33:60.76:442,61,0	1/1:4,11:14:6.61:149,7,0	0/0:16,0:15:40.38:0,40,277	0/0:15,0:15:34.64:0,35,204	1/1:3,20:23:53.08:343,53,0	1/1:8,11:19:19.69:187,20,0	1/1:13,26:39:67.64:441,68,0	1/1:2,25:27:70.76:453,71,0	1/1:17,10:25:18.20:208,18,0	1/1:5,19:23:50:321,50,0	1/1:6,19:24:38.96:291,39,0	1/1:5,10:13:23.41:151,23,0	1/1:2,23:25:70.82:456,71,0	1/1:4,18:23:52.12:328,52,0	1/1:7,17:24:48.74:307,49,0	1/1:10,12:18:37.88:235,38,0	1/1:7,20:25:55.87:359,56,0	1/1:1,7:8:20.57:127,21,0
chr10	56367789	.	ATG	A	741.21	PASS	AB=0.966;AC=13;AF=0.232;AN=56;BaseQRankSum=9.945;DP=505;FS=37.716;HRun=0;HaplotypeScore=89.8298;InbreedingCoeff=0.1252;MQ=81.83;MQ0=1;MQRankSum=-1.534;QD=3.90;ReadPosRankSum=5.556;VQSLOD=0.4847;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:88.03:0,88,1242	0/0:5,0:5:11.19:0,11,78	0/0:22,0:22:13.05:0,13,452	0/0:14,0:13:9.61:0,10,177	0/0:25,0:25:60.35:0,60,729	0/0:17,0:17:20.88:0,21,241	0/0:25,0:26:65.40:0,65,466	0/0:15,0:15:38.81:0,39,310	0/1:20,0:20:1.87:130,0,2	0/1:16,0:16:22.96:23,0,149	0/1:11,1:12:23.36:48,0,23	0/0:22,0:24:59.75:0,60,403	0/0:11,0:11:33.07:0,33,558	0/0:12,0:12:36.08:0,36,594	0/1:21,0:21:30.75:86,0,31	0/0:13,0:13:38.65:0,39,276	0/0:27,0:29:78.59:0,79,588	0/0:16,0:16:41.50:0,42,293	0/1:17,0:17:50.01:50,0,67	0/1:20,0:20:59.16:59,0,102	0/1:20,3:23:99:101,0,100	0/0:9,0:9:20.78:0,21,148	0/0:10,0:10:13.71:0,14,142	0/0:34,0:35:99:0,100,706	0/1:14,2:16:38.15:95,0,38	0/1:14,0:13:21.80:65,0,22	1/1:17,0:17:34.95:133,35,0	1/1:13,1:14:8.53:113,9,0
chr10	56367790	.	TG	T	4288.06	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=4.773;DP=513;FS=21.666;HRun=10;HaplotypeScore=73.4782;InbreedingCoeff=0.9022;MQ=80.73;MQ0=1;MQRankSum=-2.667;QD=10.94;ReadPosRankSum=6.325;VQSLOD=2.0959;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:64.78:0,65,612	1/1:2,3:5:5.74:38,6,0	0/0:20,0:21:11.08:0,11,105	0/0:14,0:13:9.12:0,9,76	0/0:27,0:27:16.48:0,16,329	1/1:10,10:21:30.99:246,31,0	1/1:6,20:26:53.97:468,54,0	1/1:8,8:16:14.97:127,15,0	1/1:2,0:19:32.59:96,33,0	1/1:7,0:16:14.24:42,14,0	1/1:3,0:12:16.22:48,16,0	1/1:6,19:25:53.97:468,54,0	0/0:12,0:12:27.03:0,27,279	0/0:14,0:14:33.04:0,33,338	1/1:3,0:21:28.51:84,29,0	1/1:1,12:13:35.99:312,36,0	1/1:6,21:27:32.80:513,33,0	1/1:1,15:16:38.99:338,39,0	1/1:4,0:17:22.87:67,23,0	1/1:6,0:19:23.13:74,23,0	1/1:10,0:23:26.40:78,26,0	1/1:6,4:10:11.97:104,12,0	1/1:6,3:10:3.03:73,3,0	1/1:4,32:36:95.97:833,96,0	1/1:5,0:15:16.29:48,16,0	1/1:2,0:13:21.86:80,22,0	1/1:0,0:17:28.52:84,29,0	1/1:2,0:14:22.41:66,22,0
chr10	56369633	.	A	AC	6342.44	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-5.665;DP=573;FS=7.260;HRun=8;HaplotypeScore=73.5496;InbreedingCoeff=0.9140;MQ=89.92;MQ0=0;MQRankSum=-4.521;QD=14.85;ReadPosRankSum=1.354;VQSLOD=4.6433;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:56.14:0,56,638	1/1:3,9:12:21.02:228,21,0	0/0:24,0:22:40.95:0,41,395	0/0:29,0:29:56.89:0,57,507	0/0:18,0:18:50.20:0,50,460	1/1:1,14:15:36.11:415,36,0	1/1:5,24:29:57.64:658,58,0	1/1:13,24:37:14.26:662,14,0	1/1:7,2:19:25.94:170,26,0	1/1:6,0:10:5.34:28,5,0	1/1:4,1:8:11.70:98,12,0	1/1:5,26:31:42.10:485,42,0	0/0:16,0:16:38.99:0,39,351	0/0:26,0:26:71.97:0,72,644	1/1:3,0:17:8.36:43,8,0	1/1:5,16:22:17.52:437,18,0	1/1:0,18:18:45.13:519,45,0	1/1:4,31:35:56.97:658,57,0	1/1:6,1:14:20.20:126,20,0	1/1:4,2:14:23.09:159,23,0	1/1:10,4:38:48.63:286,49,0	1/1:4,7:11:21.06:241,21,0	1/1:1,11:12:24.07:277,24,0	1/1:6,22:28:42.12:485,42,0	1/1:3,0:11:5.59:27,6,0	1/1:4,1:15:23.37:135,23,0	1/1:3,2:23:23.02:142,23,0	1/1:1,1:8:8.69:63,9,0
chr10	56370127	.	TCC	T	6452.97	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-2.187;DP=482;FS=14.045;HRun=3;HaplotypeScore=66.9647;InbreedingCoeff=0.9807;MQ=61.59;MQ0=26;MQRankSum=0.823;QD=18.92;ReadPosRankSum=-0.419;VQSLOD=1.1633;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:17:40.53:0,41,359	1/1:7,0:7:20.98:175,21,0	0/0:37,0:16:10.23:0,10,216	0/0:40,0:16:28.78:0,29,291	0/0:15,0:14:34.72:0,35,286	1/1:16,0:16:30.28:240,30,0	1/1:22,0:22:54.09:438,54,0	1/1:2,13:15:39.79:325,40,0	1/1:12,0:11:19.05:208,19,0	1/1:28,0:27:76.19:688,76,0	1/1:13,0:13:29.97:250,30,0	1/1:15,0:15:29.44:228,29,0	0/0:13,0:11:29.91:0,30,247	0/0:18,0:18:47.16:0,47,411	1/1:18,0:17:38.79:326,39,0	1/1:12,0:12:14.99:129,15,0	1/1:14,0:14:38.71:304,39,0	1/1:19,0:19:47.79:375,48,0	1/1:10,0:10:27.01:246,27,0	1/1:21,0:19:50.60:401,51,0	1/1:21,0:21:41.96:353,42,0	1/1:9,0:9:17.99:154,18,0	1/1:14,0:14:29.96:249,30,0	1/1:21,0:19:26.13:220,26,0	1/1:10,0:9:17.98:151,18,0	1/1:14,0:14:41.99:378,42,0	1/1:13,0:13:27.84:222,28,0	1/1:17,0:16:47.92:393,48,0
chr10	56373275	.	TC	T	3054.39	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=5.079;DP=347;FS=1.471;HRun=9;HaplotypeScore=40.6619;InbreedingCoeff=0.9488;MQ=79.05;MQ0=0;MQRankSum=-0.136;QD=20.92;ReadPosRankSum=1.762;VQSLOD=3.9910;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:51.12:0,51,567	0/0:4,0:4:6.02:0,6,69	0/0:8,0:7:11.90:0,12,119	0/0:12,0:12:6.97:0,7,179	0/0:11,0:11:30.08:0,30,338	1/1:2,12:14:36.02:330,36,0	1/1:3,21:24:63.03:577,63,0	0/0:12,0:12:21.05:0,21,232	0/0:7,0:7:21.06:0,21,241	0/0:14,0:14:27.08:0,27,311	0/0:7,0:7:21.06:0,21,242	1/1:0,7:7:21.01:192,21,0	0/0:11,0:12:35.94:0,36,395	0/0:8,0:8:20.85:0,21,221	0/0:9,0:9:21.06:0,21,242	1/1:0,6:6:18.01:165,18,0	1/1:4,28:32:72.03:659,72,0	1/1:0,16:16:39.02:357,39,0	0/0:9,0:9:18.05:0,18,206	0/0:12,0:12:33.10:0,33,381	0/0:18,0:18:33.10:0,33,381	1/1:0,11:11:27.01:247,27,0	1/1:1,13:14:39.01:357,39,0	1/1:6,16:22:42.01:384,42,0	0/0:9,0:9:24.07:0,24,277	0/0:10,0:10:21.06:0,21,242	0/0:14,0:14:39.08:0,39,436	0/0:3,0:3:9.03:0,9,104
chr10	56373364	.	TTTG	T	754.16	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=-0.297;DP=487;FS=5.415;HRun=0;HaplotypeScore=117.1319;InbreedingCoeff=0.2781;MQ=64.01;MQ0=4;MQRankSum=1.949;QD=3.20;ReadPosRankSum=-1.510;VQSLOD=1.2402;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:72.13:0,72,1106	0/0:8,0:8:8.18:0,8,98	0/0:40,0:16:12.63:0,13,143	0/0:33,0:15:21.49:0,21,126	0/0:23,0:23:57.17:0,57,1010	1/1:15,0:15:3.15:15,3,0	0/1:10,0:10:15.21:15,0,16	0/1:13,0:12:16.16:16,0,73	0/0:14,0:14:9.75:0,10,130	0/0:25,0:25:7.19:0,7,67	0/0:15,0:15:9.37:0,9,91	1/1:12,0:12:4.60:16,5,0	0/0:8,0:8:17.96:0,18,228	0/0:6,0:6:15.02:0,15,198	0/0:11,0:11:0.59:0,1,75	1/1:13,0:13:6.22:39,6,0	1/1:31,1:31:43.82:240,44,0	1/1:22,2:24:45.87:255,46,0	0/1:10,0:10:17.27:17,0,34	0/0:12,0:12:6.97:0,7,57	0/0:3,0:3:2.50:0,2,9	1/1:16,0:16:10.87:70,11,0	0/1:14,0:14:29.34:50,0,29	1/1:25,1:26:4.73:125,5,0	0/0:21,0:20:8.32:0,8,40	0/1:21,0:21:10.68:11,0,48	0/1:20,0:19:49.10:49,0,112	0/1:10,0:9:12.79:13,0,42
chr10	56373365	.	TTG	T	3487.77	PASS	AB=1.000;AC=32;AF=0.571;AN=56;BaseQRankSum=0.293;DP=481;FS=1.440;HRun=0;HaplotypeScore=99.4011;InbreedingCoeff=0.3339;MQ=64.03;MQ0=4;MQRankSum=0.092;QD=10.87;ReadPosRankSum=-2.400;VQSLOD=3.0654;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:46.03:0,46,989	0/1:8,0:8:5.93:6,0,37	0/0:38,0:16:14.29:0,14,172	0/0:33,0:17:18.84:0,19,169	0/0:23,0:23:65.14:0,65,867	1/1:14,1:15:28.76:169,29,0	1/1:9,1:10:11.90:150,12,0	0/1:13,0:12:22.27:76,0,22	0/1:13,0:13:20.29:20,0,25	0/1:26,0:25:22.95:72,0,23	0/1:15,0:15:13.52:50,0,14	1/1:13,1:14:35.94:239,36,0	0/0:8,0:8:17.89:0,18,197	0/0:7,0:7:17.87:0,18,172	0/1:11,0:11:14.58:15,0,22	1/1:13,0:13:27.94:181,28,0	1/1:23,7:29:63.89:701,64,0	1/1:11,13:24:67.34:765,67,0	0/1:9,0:9:0.92:26,0,1	0/1:12,0:12:2.39:2,0,5	1/1:3,0:3:0.47:1,0,0	1/1:15,0:15:34.84:254,35,0	1/1:13,1:14:9.63:140,10,0	1/1:26,0:26:55.09:355,55,0	0/0:19,0:18:5.24:0,5,24	1/1:20,0:20:19.40:155,19,0	0/1:20,0:19:27.62:89,0,28	0/1:10,0:9:1.07:20,0,1
chr10	56373366	.	TG	T	5583.64	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=4.342;DP=471;FS=0.000;HRun=1;HaplotypeScore=85.2626;InbreedingCoeff=0.9037;MQ=65.71;MQ0=4;MQRankSum=-3.531;QD=16.57;ReadPosRankSum=-1.274;VQSLOD=4.4690;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:19.43:0,19,741	1/1:5,3:8:11.53:88,12,0	0/0:34,2:16:18.35:0,18,209	0/0:27,1:15:23.79:0,24,185	0/0:23,0:23:63.47:0,63,680	1/1:1,14:15:30.06:387,30,0	1/1:6,4:10:25.68:257,26,0	1/1:13,1:13:24.40:222,24,0	1/1:12,0:13:27.07:152,27,0	1/1:23,1:23:22.47:165,22,0	1/1:15,0:15:29.36:212,29,0	1/1:10,5:15:42.49:450,42,0	0/0:7,0:7:17.89:0,18,162	0/0:7,0:7:14.22:0,14,115	1/1:11,0:11:18.44:96,18,0	1/1:7,5:12:36.01:391,36,0	1/1:26,2:27:68.22:494,68,0	1/1:23,2:25:68.28:433,68,0	1/1:9,0:9:15.38:93,15,0	1/1:11,0:11:13.33:56,13,0	1/1:2,0:2:3:29,3,0	1/1:11,4:15:39.38:363,39,0	1/1:10,3:13:29.11:295,29,0	1/1:13,13:26:65.88:696,66,0	1/1:20,0:19:2.72:28,3,0	1/1:19,0:19:46.08:327,46,0	1/1:22,0:21:37.16:255,37,0	1/1:10,0:9:17.81:96,18,0
chr10	56374070	.	CT	C	3872.34	PASS	AB=0.813;AC=53;AF=0.946;AN=56;BaseQRankSum=-3.010;DP=149;FS=33.174;HRun=3;HaplotypeScore=44.7072;InbreedingCoeff=0.0919;MQ=80.15;MQ0=0;MQRankSum=-3.744;QD=26.34;ReadPosRankSum=0.425;VQSLOD=1.4529;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,9:12:30.06:339,30,0	1/1:0,1:1:3.01:36,3,0	0/1:10,3:11:75.51:76,0,111	0/0:2,0:2:1.82:0,2,5	1/1:1,2:3:3:27,3,0	1/1:2,4:6:14.95:136,15,0	1/1:1,4:5:14.96:147,15,0	1/1:2,9:11:33.08:383,33,0	1/1:0,7:7:21.06:252,21,0	1/1:2,7:9:27.08:333,27,0	1/1:0,3:3:5.97:56,6,0	1/1:3,8:11:30.03:327,30,0	1/1:1,2:3:8.97:79,9,0	1/1:2,3:5:15.04:170,15,0	1/1:1,3:4:12.04:144,12,0	1/1:0,4:4:11.99:128,12,0	1/1:1,3:4:6.02:71,6,0	1/1:1,0:1:3.01:37,3,0	1/1:3,5:8:24.05:263,24,0	1/1:0,1:1:3.01:36,3,0	1/1:1,2:3:3:25,3,0	1/1:1,6:7:11.90:117,12,0	1/1:1,4:5:6.02:73,6,0	1/1:2,3:5:11.99:124,12,0	1/1:0,8:8:20.98:219,21,0	1/1:0,3:3:9.03:111,9,0	1/1:1,3:4:11.98:127,12,0	1/1:0,1:1:3.01:36,3,0
chr10	56374279	.	A	AT	5853.51	PASS	AB=0.857;AC=53;AF=0.946;AN=56;BaseQRankSum=-1.910;DP=492;FS=1.135;HRun=2;HaplotypeScore=192.3861;InbreedingCoeff=0.3541;MQ=66.12;MQ0=0;MQRankSum=2.301;QD=12.14;ReadPosRankSum=0.613;VQSLOD=3.6762;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:43,1:44:74.70:457,75,0	1/1:5,0:5:11.36:56,11,0	0/1:5,1:6:30.67:31,0,69	0/0:9,0:10:4.48:0,4,77	1/1:8,0:8:16.75:79,17,0	1/1:18,0:18:39.96:233,40,0	1/1:26,0:26:64:332,64,0	1/1:35,0:35:99:769,99,0	1/1:13,0:13:29.87:177,30,0	1/1:15,0:15:38.82:304,39,0	1/1:8,0:8:0.62:42,1,0	1/1:27,1:28:55.16:347,55,0	1/1:23,0:23:40.65:193,41,0	1/1:18,0:18:42.26:247,42,0	1/1:32,0:32:66.41:380,66,0	1/1:24,0:24:32.53:166,33,0	1/1:30,0:30:57.97:328,58,0	1/1:14,1:14:31.09:207,31,0	1/1:14,1:15:27.74:252,28,0	1/1:15,0:15:28.19:134,28,0	1/1:26,0:26:45.38:229,45,0	1/1:10,0:10:21.01:124,21,0	1/1:7,0:7:14.87:97,15,0	1/1:27,0:27:40.69:260,41,0	1/1:8,0:8:15.14:100,15,0	1/1:14,0:14:24.51:178,25,0	1/1:11,0:11:18.05:87,18,0	1/1:1,0:1:3.01:42,3,0
chr10	56377963	.	C	CG	6020.54	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-10.400;DP=740;FS=6.702;HRun=1;HaplotypeScore=77.1977;InbreedingCoeff=0.9974;MQ=83.74;MQ0=0;MQRankSum=-3.552;QD=39.09;ReadPosRankSum=2.510;VQSLOD=5.5427;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,138,1791	0/0:10,0:10:30.10:0,30,387	0/0:29,0:28:81.22:0,81,999	0/0:22,0:21:60.15:0,60,722	0/0:23,0:23:66.18:0,66,838	1/1:0,17:17:51.17:764,51,0	1/1:0,27:27:72.24:1078,72,0	0/0:24,0:24:63.20:0,63,818	0/0:30,0:30:78.24:0,78,997	0/0:24,0:24:69.17:0,69,863	0/0:23,0:23:69.22:0,69,895	1/1:1,27:28:75.25:1123,75,0	0/0:33,0:33:99:0,99,1283	0/0:25,0:25:75.24:0,75,973	0/0:26,0:26:78.25:0,78,1012	0/0:29,0:29:87.28:0,87,1125	0/0:35,0:35:99:0,105,1344	0/0:24,1:25:30.37:0,30,888	0/0:23,0:23:63.20:0,63,816	0/0:24,0:24:63.18:0,63,789	0/0:49,0:49:99:0,132,1695	1/1:1,24:25:21.34:814,21,0	1/1:1,27:28:66.22:983,66,0	1/1:0,29:29:84.28:1259,84,0	0/0:18,0:18:54.18:0,54,701	0/0:36,0:36:99:0,102,1312	0/0:23,0:22:66.21:0,66,856	0/0:6,0:6:18.06:0,18,234
chr10	56383925	.	C	CA	11930.53	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=19.496;DP=766;FS=26.139;HRun=1;HaplotypeScore=96.0336;InbreedingCoeff=0.9849;MQ=75.16;MQ0=0;MQRankSum=-0.170;QD=39.64;ReadPosRankSum=1.588;VQSLOD=2.8440;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,150,1896	0/0:11,0:11:33.11:0,33,428	0/0:22,0:22:56.79:0,57,669	0/0:15,0:15:32.12:0,32,381	0/0:22,0:22:57.13:0,57,683	0/0:20,0:20:57.19:0,57,740	0/0:27,0:27:78.25:0,78,1011	0/0:29,0:29:87.20:0,87,1095	1/1:3,25:28:72.20:1053,72,0	1/1:5,26:31:86.81:1230,87,0	1/1:0,19:19:51.17:764,51,0	0/0:34,0:34:93.30:0,93,1207	0/0:37,0:37:99:0,99,1282	0/0:27,0:27:78.23:0,78,984	1/1:1,37:38:90.26:1323,90,0	0/0:25,0:25:72.23:0,72,935	0/0:44,0:44:99:0,126,1619	0/0:25,0:25:72.23:0,72,934	1/1:0,16:16:48.16:719,48,0	1/1:3,12:15:42.14:619,42,0	1/1:4,55:59:99:2104,141,0	0/0:14,0:14:39.13:0,39,506	0/0:23,0:23:63.17:0,63,787	0/0:37,0:36:99:0,102,1324	1/1:2,20:22:60.20:897,60,0	1/1:1,35:36:99:1602,108,0	1/1:0,35:35:99:1528,102,0	1/1:0,2:2:6.02:90,6,0
chr10	56383926	.	A	AAG	8203.42	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=19.954;DP=755;FS=24.917;HRun=0;HaplotypeScore=123.1809;InbreedingCoeff=0.9849;MQ=74.78;MQ0=0;MQRankSum=-2.588;QD=27.90;ReadPosRankSum=2.502;VQSLOD=3.7498;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,150,2405	0/0:11,0:11:33.11:0,33,536	0/0:21,0:21:57.15:0,57,854	0/0:15,0:15:36.49:0,36,485	0/0:21,0:21:60.19:0,60,942	0/0:20,0:20:57.19:0,57,926	0/0:28,0:28:78.27:0,78,1262	0/0:29,0:29:87.15:0,87,1361	1/1:27,0:28:48.45:684,48,0	1/1:27,1:29:74.77:835,75,0	1/1:19,0:19:51.12:533,51,0	0/0:33,0:33:96.31:0,96,1539	0/0:36,0:36:99:0,99,1597	0/0:27,0:27:78.25:0,78,1243	1/1:37,0:37:88.47:886,88,0	0/0:25,0:25:72.25:0,72,1175	0/0:44,0:44:99:0,126,2045	0/0:25,0:25:72.25:0,72,1172	1/1:16,0:16:48.09:517,48,0	1/1:13,2:15:41.57:434,42,0	1/1:54,1:55:99:1458,119,0	0/0:14,0:14:39.13:0,39,636	0/0:23,0:23:66.21:0,66,1044	0/0:37,0:36:99:0,105,1688	1/1:22,0:22:45.94:596,46,0	1/1:35,1:36:99:1176,108,0	1/1:35,0:35:99:1026,102,0	1/1:2,0:2:6.01:58,6,0
chr10	56385582	.	TA	T	3426.46	PASS	AC=36;AF=0.692;AN=52;BaseQRankSum=5.534;DP=321;FS=1.134;HRun=12;HaplotypeScore=33.6976;InbreedingCoeff=0.8498;MQ=57.58;MQ0=17;MQRankSum=2.638;QD=16.47;ReadPosRankSum=4.539;VQSLOD=3.9688;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:18:42.04:0,42,415	0/0:3,0:3:9.02:0,9,91	0/0:12,0:3:5.99:0,6,53	0/0:12,0:6:7.40:0,7,68	0/0:15,0:15:40.30:0,40,386	1/1:2,13:14:20.92:162,21,0	1/1:0,5:5:14.94:116,15,0	0/0:40,1:36:82.37:0,82,815	1/1:0,4:4:11.95:93,12,0	1/1:2,16:18:47.08:368,47,0	1/1:2,10:12:26.86:209,27,0	1/1:1,3:4:8.97:70,9,0	0/0:7,0:7:15.03:0,15,152	0/0:2,0:2:2.97:0,3,20	1/1:1,3:4:8.97:70,9,0	1/1:1,7:8:8.94:70,9,0	1/1:5,29:30:80.67:627,81,0	1/1:4,17:17:40.89:308,41,0	1/1:2,4:4:11.46:78,11,0	1/1:2,8:10:20.63:147,21,0	1/1:0,3:3:8.97:70,9,0	1/1:0,2:2:5.93:41,6,0	./.	./.	1/1:3,12:15:28.93:215,29,0	1/1:3,11:14:32.83:249,33,0	1/1:1,13:14:32.87:255,33,0	1/1:6,12:18:35.86:279,36,0
chr10	56386069	.	A	AGT	11271.60	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-9.083;DP=555;FS=0.000;HRun=0;HaplotypeScore=66.4824;InbreedingCoeff=0.9973;MQ=70.32;MQ0=5;MQRankSum=-0.799;QD=53.17;ReadPosRankSum=0.291;VQSLOD=5.3264;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:96.30:0,96,1445	0/0:9,0:9:27.05:0,27,387	0/0:26,0:17:42.14:0,42,639	0/0:38,0:21:57.17:0,57,832	0/0:16,0:16:45.15:0,45,689	0/0:23,0:23:63.05:0,63,964	0/0:23,0:23:66.22:0,66,1009	0/0:18,0:18:48.16:0,48,716	1/1:2,23:25:72.25:1370,72,0	1/1:0,19:20:60.21:1146,60,0	1/1:1,13:14:42.14:810,42,0	0/0:19,0:19:57.19:0,57,870	0/0:16,0:16:48.14:0,48,710	0/0:19,0:19:57.19:0,57,873	1/1:0,21:21:51.17:985,51,0	0/0:25,0:25:69.23:0,69,1057	0/0:22,0:22:60.16:0,60,883	0/0:7,0:7:15.05:0,15,230	1/1:3,13:16:42.63:820,43,0	1/1:0,17:17:48.16:927,48,0	1/1:0,32:32:87.30:1681,87,0	0/0:21,0:21:60.20:0,60,918	0/0:16,0:16:48.16:0,48,735	0/0:13,0:13:39.12:0,39,574	1/1:0,14:14:39.13:753,39,0	1/1:0,26:26:75.26:1449,75,0	1/1:0,18:18:45.15:868,45,0	1/1:0,9:9:24.08:463,24,0
chr10	56386116	.	AAAAG	A	1338.42	PASS	AB=1.000;AC=21;AF=0.404;AN=52;BaseQRankSum=5.013;DP=432;FS=8.959;HRun=0;HaplotypeScore=102.9704;InbreedingCoeff=0.7861;MQ=42.69;MQ0=13;MQRankSum=-1.307;QD=8.01;ReadPosRankSum=-1.101;VQSLOD=1.4217;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:24:12.02:0,12,481	0/1:3,0:3:0:0,0,0	./.	./.	0/0:14,0:13:23.98:0,24,337	0/0:14,0:13:20.85:0,21,168	0/0:14,0:14:23.58:0,24,319	0/0:35,0:33:42.41:0,42,793	1/1:13,1:14:20.68:156,21,0	1/1:20,1:19:32.14:232,32,0	1/1:15,1:12:19.44:169,19,0	0/0:21,0:19:32.78:0,33,387	0/0:15,0:13:23.76:0,24,234	0/0:16,0:15:27.03:0,27,349	1/1:17,2:17:31.26:281,31,0	0/0:18,0:17:32.80:0,33,442	0/0:19,0:17:27.45:0,27,426	0/0:5,0:5:3:0,3,29	0/1:21,0:16:1.61:83,0,2	0/1:11,0:9:22:43,0,22	1/1:10,1:9:11.98:98,12,0	0/0:14,0:13:14.89:0,15,160	0/0:16,0:16:23.56:0,24,206	0/0:14,0:12:11.11:0,11,174	1/1:8,0:6:9.81:64,10,0	1/1:12,1:13:24.92:150,25,0	1/1:16,0:16:11.90:105,12,0	1/1:12,2:10:17:152,17,0
chr10	56386165	.	A	ACATGAG	6330.04	PASS	AC=20;AF=0.370;AN=54;BaseQRankSum=-4.317;DP=333;FS=22.897;HRun=0;HaplotypeScore=98.8905;InbreedingCoeff=0.9581;MQ=86.28;MQ0=3;MQRankSum=-9.346;QD=60.29;ReadPosRankSum=2.003;VQSLOD=3.3976;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:39.09:0,39,824	./.	0/0:23,0:16:36.01:0,36,663	0/0:28,0:21:48.62:0,49,989	0/0:7,0:7:18.06:0,18,371	1/1:1,7:8:15.05:518,15,0	1/1:9,12:21:36.12:1231,36,0	1/1:4,11:15:42.13:1329,42,0	0/0:9,0:9:24.08:0,24,517	0/0:13,0:13:30.09:0,30,628	0/0:9,0:9:24.08:0,24,532	1/1:0,5:7:15.05:518,15,0	0/0:14,0:14:33.06:0,33,630	0/0:9,0:9:24.08:0,24,542	0/0:12,0:12:36.08:0,36,688	1/1:2,2:5:9.03:310,9,0	1/1:6,7:12:21.07:720,21,0	1/1:0,3:4:6.02:205,6,0	0/0:14,0:14:39.13:0,39,777	0/0:17,0:17:39.09:0,39,799	0/0:11,0:11:24:0,24,492	1/1:1,4:5:15.05:499,15,0	1/1:3,4:7:12.04:380,12,0	1/1:2,11:18:17.91:620,18,0	0/0:9,0:9:27.09:0,27,602	0/0:13,0:13:30.06:0,30,603	0/0:10,0:10:30.06:0,30,621	0/0:12,0:12:33.11:0,33,747
chr10	56387482	.	G	GA	4964.47	PASS	AB=0.706;AC=37;AF=0.685;AN=54;BaseQRankSum=-3.705;DP=515;FS=0.462;HRun=12;HaplotypeScore=60.8550;InbreedingCoeff=0.1715;MQ=51.28;MQ0=9;MQRankSum=-3.770;QD=10.93;ReadPosRankSum=0.576;VQSLOD=4.2081;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:31,3:33:19.08:19,0,340	0/1:4,3:6:11.65:51,0,12	./.	0/0:6,0:5:4.05:0,4,12	0/0:13,0:14:22.85:0,23,159	1/1:2,12:14:29.98:279,30,0	0/1:8,5:11:9.88:76,0,10	0/1:14,12:26:61.46:249,0,61	1/1:10,14:25:8.04:220,8,0	0/1:7,8:16:33.18:149,0,33	1/1:2,10:13:2.04:163,2,0	0/1:6,11:17:0.81:154,0,1	0/0:8,0:9:25.90:0,26,181	0/0:22,0:25:58.39:0,58,404	1/1:7,21:29:29.01:430,29,0	1/1:6,17:21:17.16:328,17,0	1/1:6,22:29:40.30:575,40,0	0/1:7,12:20:5.33:235,0,5	1/1:15,9:24:14.09:288,14,0	1/1:4,10:14:23.87:218,24,0	0/1:5,2:7:31.80:46,0,32	1/1:11,10:22:1.08:181,1,0	1/1:6,10:17:11.05:124,11,0	1/1:11,21:32:10.28:423,10,0	1/1:8,13:23:30.19:263,30,0	0/1:9,5:14:4.13:102,0,4	1/1:6,16:25:25.58:361,26,0	1/1:2,2:3:3:29,3,0
chr10	56390055	.	A	AC	5208.07	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=12.084;DP=586;FS=1.111;HRun=0;HaplotypeScore=76.6928;InbreedingCoeff=0.9707;MQ=68.62;MQ0=0;MQRankSum=0.457;QD=24.68;ReadPosRankSum=3.148;VQSLOD=6.0428;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:45.60:0,46,576	1/1:0,11:11:24.08:301,24,0	0/0:17,0:15:4.85:0,5,306	0/0:10,0:7:8.07:0,8,94	0/0:41,0:40:99:0,120,1399	1/1:4,18:25:56.61:605,57,0	1/1:5,5:10:28.53:282,29,0	1/1:2,29:31:88.94:907,89,0	0/0:21,0:21:59.96:0,60,703	0/0:38,0:38:99:0,108,1314	0/0:20,0:20:60.17:0,60,768	1/1:1,16:18:45.10:541,45,0	0/0:15,0:15:39.10:0,39,477	0/0:18,0:18:46.43:0,46,559	0/0:20,0:20:52.79:0,53,719	1/1:1,10:12:27.03:321,27,0	1/1:2,17:21:43.26:491,43,0	1/1:4,22:26:42.58:509,43,0	0/0:18,0:18:53.86:0,54,585	0/0:34,0:34:92.29:0,92,1003	0/0:16,0:16:45.11:0,45,544	1/1:1,14:15:27.74:467,28,0	1/1:4,22:27:43.72:476,44,0	1/1:2,13:15:26.75:307,27,0	0/0:20,0:20:54.13:0,54,658	0/0:29,0:29:84.18:0,84,997	0/0:31,0:31:90.09:0,90,1069	0/0:10,0:10:29.94:0,30,317
chr10	56390211	.	C	CGTTT	17328.90	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-18.163;DP=756;FS=10.782;HRun=0;HaplotypeScore=114.0330;InbreedingCoeff=0.9998;MQ=80.10;MQ0=1;MQRankSum=-7.005;QD=57.96;ReadPosRankSum=1.485;VQSLOD=6.1186;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:61,0:61:99:0,162,2818	1/1:0,11:11:27.09:713,27,0	0/0:21,0:21:53.54:0,54,887	0/0:27,0:27:63.19:0,63,1109	0/0:25,0:25:69.22:0,69,1231	1/1:3,27:32:60.21:1566,60,0	1/1:2,31:33:81.28:2133,81,0	1/1:6,33:42:99:2365,108,0	0/0:26,0:26:78.25:0,78,1388	0/0:20,0:20:60.18:0,60,1017	0/0:23,0:23:63.18:0,63,1116	1/1:2,22:25:57.20:1503,57,0	0/0:25,0:25:69.21:0,69,1206	0/0:30,0:30:87.30:0,87,1599	0/0:37,0:37:99:0,105,1888	1/1:1,24:26:72.18:1838,72,0	1/1:1,25:28:66.23:1742,66,0	1/1:1,21:25:45.11:1129,45,0	0/0:17,0:17:48.14:0,48,821	0/0:35,0:35:93.32:0,93,1694	0/0:34,0:34:93.26:0,93,1587	1/1:2,22:25:54.19:1407,54,0	1/1:5,21:27:60.63:1509,61,0	1/1:1,22:23:54.66:1424,55,0	0/0:16,0:16:42.13:0,42,732	0/0:25,0:25:69.23:0,69,1218	0/0:24,0:24:63.22:0,63,1152	0/0:11,0:11:33.08:0,33,544
chr10	56391846	.	TC	T	6399.99	PASS	AB=0.938;AC=54;AF=0.964;AN=56;BaseQRankSum=-4.835;DP=494;FS=0.000;HRun=3;HaplotypeScore=100.8719;InbreedingCoeff=0.0122;MQ=63.67;MQ0=24;MQRankSum=-0.950;QD=12.96;ReadPosRankSum=-0.911;VQSLOD=3.0863;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:27:57.05:408,57,0	1/1:3,0:3:5.88:36,6,0	0/1:29,0:9:9.87:10,0,84	0/1:17,3:11:38.99:77,0,39	1/1:28,1:27:47.83:392,48,0	1/1:28,0:26:22.43:171,22,0	1/1:16,0:14:33.37:269,33,0	1/1:18,0:15:33.12:225,33,0	1/1:13,0:13:32.71:275,33,0	1/1:4,14:17:33.47:289,33,0	1/1:23,0:20:43.20:366,43,0	1/1:14,0:11:29.26:202,29,0	1/1:14,0:12:26.92:220,27,0	1/1:11,0:10:21.49:194,21,0	1/1:15,0:15:38.93:325,39,0	1/1:15,0:15:37.58:286,38,0	1/1:32,0:28:48.95:312,49,0	1/1:7,0:7:16.53:109,17,0	1/1:3,6:8:17.50:140,17,0	1/1:16,2:18:24.79:228,25,0	1/1:6,0:5:2.99:24,3,0	1/1:19,0:18:41.80:341,42,0	1/1:13,0:13:5.61:42,6,0	1/1:17,0:17:23.32:190,23,0	1/1:14,1:14:12.29:97,12,0	1/1:19,0:19:47.54:411,48,0	1/1:22,1:23:53.92:413,54,0	1/1:20,0:18:41.94:348,42,0
chr10	56391847	.	CCTTTTTTTT	C	5155.09	PASS	AB=0.963;AC=36;AF=0.643;AN=56;BaseQRankSum=1.177;DP=506;FS=6.968;HRun=0;HaplotypeScore=157.0807;InbreedingCoeff=-0.4213;MQ=61.55;MQ0=28;MQRankSum=5.584;QD=10.33;ReadPosRankSum=2.842;VQSLOD=3.4099;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:30:99:123,0,1069	0/1:3,0:3:10.75:11,0,19	0/1:28,0:8:6.71:7,0,138	0/1:21,0:11:39.54:76,0,40	0/1:27,0:28:99:168,0,719	1/1:4,23:26:15.59:610,16,0	1/1:13,3:14:26.37:421,26,0	0/1:19,0:16:99:104,0,113	0/1:13,0:14:99:189,0,284	0/1:20,0:19:97.15:97,0,640	0/1:21,0:20:99:124,0,505	1/1:13,1:11:25.62:259,26,0	0/1:16,0:14:99:115,0,436	0/1:11,0:10:99:130,0,213	0/1:13,0:16:99:136,0,374	1/1:14,0:14:32.07:371,32,0	1/1:25,3:25:25.58:590,26,0	1/1:6,1:7:9.54:210,10,0	0/1:11,0:8:55.99:56,0,135	0/1:15,0:18:80.79:81,0,410	0/0:3,0:5:6.02:0,6,110	1/1:17,1:18:30.85:398,31,0	1/1:2,10:13:0.74:90,1,0	1/1:16,1:17:24.58:353,25,0	0/1:13,0:14:23.63:24,0,469	0/1:19,0:20:26.50:27,0,617	0/1:22,0:23:99:212,0,612	0/1:20,0:18:99:174,0,251
chr10	56392242	.	TGGGGCC	T	11679.95	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=16.235;DP=629;FS=2.371;HRun=0;HaplotypeScore=145.2625;InbreedingCoeff=0.9890;MQ=79.51;MQ0=0;MQRankSum=-16.953;QD=56.98;ReadPosRankSum=-1.008;VQSLOD=4.5217;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:46:99:0,138,4875	1/1:0,3:3:9.03:195,9,0	0/0:18,0:18:24.53:0,25,1511	0/0:22,0:21:59.78:0,60,2067	0/0:19,0:19:51.18:0,51,1830	1/1:0,26:26:75.26:1838,75,0	1/1:0,23:23:57.20:1422,57,0	1/1:0,13:12:36.09:767,36,0	0/0:33,0:33:96.33:0,96,3548	0/0:19,0:19:57.17:0,57,2004	0/0:11,0:11:33.11:0,33,1213	1/1:0,29:29:63.22:1583,63,0	0/0:24,0:24:72.25:0,72,2589	0/0:21,0:21:63.22:0,63,2343	0/0:40,0:40:99:0,120,4376	1/1:0,24:24:69.24:1767,69,0	1/1:0,17:17:36.12:901,36,0	1/1:0,15:15:24.08:579,24,0	0/0:27,0:27:79.50:0,80,2702	0/0:14,0:14:42.14:0,42,1450	0/0:50,0:50:99:0,151,5600	1/1:0,21:21:54.14:1261,54,0	1/1:0,18:18:48.12:982,48,0	1/1:0,16:16:15.52:385,16,0	0/0:18,0:18:48.16:0,48,1773	0/0:19,0:19:57.17:0,57,2009	0/0:28,0:28:84.29:0,84,3110	0/0:14,0:14:42.14:0,42,1579
chr10	56392335	.	AC	A	1202.96	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.161;DP=626;FS=4.160;HRun=2;HaplotypeScore=85.7757;InbreedingCoeff=0.9434;MQ=68.19;MQ0=2;MQRankSum=0.225;QD=35.38;ReadPosRankSum=-3.602;VQSLOD=2.5214;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,126,1820	1/1:0,7:7:21.07:272,21,0	0/0:21,0:12:32.84:0,33,415	0/0:12,0:11:25.32:0,25,269	0/0:26,0:26:75.25:0,75,1117	0/0:17,0:17:51.13:0,51,738	0/0:36,0:36:99:0,102,1455	1/1:0,27:27:81.26:1051,81,0	0/0:25,0:25:75.24:0,75,1101	0/0:19,0:19:57.18:0,57,834	0/0:9,0:9:21.07:0,21,306	0/0:36,0:36:90.30:0,90,1339	0/0:23,0:23:66.22:0,66,987	0/0:19,0:19:57.19:0,57,854	0/0:28,0:28:68.99:0,69,1175	0/0:25,0:25:72.20:0,72,1054	0/0:32,0:32:90.30:0,90,1341	0/0:18,0:18:42.10:0,42,604	0/0:27,0:27:81.21:0,81,1183	0/0:12,0:12:30.09:0,30,425	0/0:30,0:30:90.30:0,90,1344	0/0:19,0:19:57.19:0,57,841	0/0:17,0:17:45.15:0,45,673	0/0:26,0:26:60.16:0,60,873	0/0:19,0:19:51.17:0,51,764	0/0:28,0:28:84.28:0,84,1258	0/0:22,0:21:66.19:0,66,939	0/0:2,0:2:6.02:0,6,90
chr10	56392648	.	CCAGCAGCAGCAGCAGCAG	C	3618.64	PASS	AB=1.000;AC=13;AF=0.500;AN=26;BaseQRankSum=3.894;DP=540;FS=0.000;HRun=0;HaplotypeScore=235.3761;InbreedingCoeff=0.7679;MQ=73.77;MQ0=3;MQRankSum=-4.127;QD=15.67;ReadPosRankSum=-1.701;VQSLOD=2.0191;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	0/1:26,0:20:0:0,0,0	./.	0/0:12,0:12:1.36:0,1,2	1/1:30,0:30:3.01:65,3,0	./.	0/0:14,0:21:30.09:0,30,917	./.	./.	1/1:23,9:33:24.08:1051,24,0	0/0:27,0:28:39.13:0,39,2360	0/0:38,0:38:57.20:0,57,3902	0/0:20,0:25:30.10:0,30,1050	1/1:26,14:41:33.11:1559,33,0	1/1:24,11:34:9.03:433,9,0	1/1:21,8:29:3.82:285,4,0	./.	./.	./.	./.	./.	1/1:26,11:37:9.49:226,9,0	./.	./.	0/0:9,0:17:21.05:0,21,713	./.
chr10	56393548	.	C	CAT	13950.32	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-10.452;DP=434;FS=2.015;HRun=0;HaplotypeScore=51.4419;InbreedingCoeff=0.9780;MQ=61.25;MQ0=2;MQRankSum=-1.829;QD=42.27;ReadPosRankSum=2.188;VQSLOD=6.2075;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:31:84.28:0,84,1226	1/1:0,5:5:15.05:281,15,0	0/0:10,0:10:30.10:0,30,434	0/0:16,0:15:24.41:0,24,466	0/0:16,0:16:45.13:0,45,639	1/1:1,15:17:33.11:617,33,0	1/1:4,18:23:33.11:614,33,0	1/1:1,21:22:63.18:1064,63,0	1/1:0,9:9:21.05:356,21,0	1/1:1,14:15:42.14:777,42,0	1/1:2,13:15:36.08:615,36,0	1/1:0,13:13:36.12:672,36,0	0/0:14,0:14:42.09:0,42,574	0/0:16,0:16:45.11:0,45,633	1/1:1,12:13:26.98:464,27,0	1/1:0,11:12:30.10:557,30,0	1/1:2,23:27:54.18:984,54,0	1/1:0,24:23:51.17:949,51,0	1/1:1,11:12:36.12:674,36,0	1/1:1,3:4:9.03:168,9,0	1/1:1,20:21:48.16:879,48,0	1/1:1,8:9:21.07:393,21,0	1/1:0,10:10:26.84:505,27,0	1/1:1,27:28:63.22:1171,63,0	1/1:1,10:11:27.09:487,27,0	1/1:1,21:22:60.21:1095,60,0	1/1:2,10:12:21.07:392,21,0	1/1:1,4:5:14.79:236,15,0
chr10	56393730	.	A	AT	408.05	PASS	AB=0.943;AC=12;AF=0.231;AN=52;BaseQRankSum=-4.304;DP=329;FS=10.088;HRun=0;HaplotypeScore=67.8724;InbreedingCoeff=0.0581;MQ=64.30;MQ0=9;MQRankSum=-2.567;QD=3.64;ReadPosRankSum=3.646;VQSLOD=2.0365;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:26:20.87:0,21,176	0/1:5,0:4:9.15:9,0,21	0/0:39,0:13:9.73:0,10,170	0/0:20,0:9:14.94:0,15,88	0/0:19,0:19:18.79:0,19,237	0/1:12,0:11:28.72:64,0,29	0/0:3,2:4:7.34:0,7,31	1/1:8,14:21:3.78:285,4,0	0/0:7,0:6:9.67:0,10,41	0/0:10,0:10:20.56:0,21,110	0/0:14,0:13:3.98:0,4,64	0/1:2,3:5:16.25:22,0,16	0/0:8,0:7:14.76:0,15,129	0/0:8,0:7:8.98:0,9,77	0/0:9,0:6:7.92:0,8,42	0/1:9,0:8:12.48:12,0,16	1/1:20,0:17:17.06:96,17,0	0/1:9,0:8:17.36:26,0,17	0/0:7,0:7:11.49:0,11,98	0/0:10,0:10:21.58:0,22,110	0/1:6,0:4:6.83:7,0,34	./.	0/0:6,0:5:6.05:0,6,27	./.	0/0:11,0:11:11.88:0,12,66	0/0:14,0:13:20.78:0,21,118	0/1:10,1:11:26.07:26,0,87	0/1:13,0:10:3.53:4,0,84
chr10	56393776	.	GGGGA	G	4717.13	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=5.773;DP=274;FS=0.000;HRun=0;HaplotypeScore=51.7525;InbreedingCoeff=0.9379;MQ=63.32;MQ0=2;MQRankSum=-4.447;QD=47.65;ReadPosRankSum=3.552;VQSLOD=5.0182;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:30.10:0,30,769	0/0:3,0:3:9.03:0,9,236	0/0:10,0:5:15.05:0,15,355	0/0:18,0:14:33.11:0,33,758	0/0:16,0:16:45.15:0,45,1176	0/0:10,0:9:24.08:0,24,628	0/0:2,0:2:6.02:0,6,157	0/0:23,0:21:54.16:0,54,1224	1/1:2,4:6:15.05:273,15,0	1/1:0,7:7:21.07:383,21,0	1/1:1,11:12:30.10:547,30,0	0/0:5,0:5:12.04:0,12,314	0/0:7,0:7:21.07:0,21,534	0/0:9,0:9:24.08:0,24,593	1/1:0,10:10:27.09:489,27,0	0/0:5,0:5:12.04:0,12,314	0/0:16,0:15:33.11:0,33,846	0/0:16,0:15:36.12:0,36,910	1/1:4,4:7:11.77:188,12,0	1/1:0,10:10:27.09:491,27,0	1/1:0,3:3:6.02:110,6,0	0/0:5,0:5:15.05:0,15,392	0/0:10,0:10:27.09:0,27,707	0/0:8,0:8:21.07:0,21,550	1/1:1,12:13:39.13:705,39,0	1/1:2,12:14:36.12:656,36,0	1/1:0,9:9:27.09:492,27,0	1/1:0,7:7:21.07:383,21,0
chr10	56393842	.	TA	T	1276.07	PASS	AB=0.750;AC=22;AF=0.393;AN=56;BaseQRankSum=-5.021;DP=448;FS=1.672;HRun=15;HaplotypeScore=72.0796;InbreedingCoeff=0.6273;MQ=66.28;MQ0=7;MQRankSum=1.887;QD=6.26;ReadPosRankSum=4.035;VQSLOD=2.8676;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,3:29:7.70:0,8,382	1/1:3,3:6:8.84:58,9,0	0/1:36,1:10:4.35:4,0,82	0/0:30,0:13:4.78:0,5,55	0/1:13,3:16:36.98:37,0,129	1/1:4,14:20:36.55:223,37,0	0/1:3,6:9:8.60:78,0,9	1/1:4,12:16:8.38:166,8,0	0/0:4,0:11:25.71:0,26,136	0/0:7,0:15:20.07:0,20,110	0/0:9,0:13:22.94:0,23,125	1/1:4,5:10:18.43:98,18,0	0/0:12,1:14:5.32:0,5,140	0/0:8,1:9:0.94:0,1,115	0/0:4,0:7:8.52:0,9,43	1/1:1,4:6:8.86:58,9,0	0/1:5,11:17:1.24:102,0,1	1/1:4,11:17:26.80:152,27,0	0/0:9,0:11:26.05:0,26,147	0/0:12,0:26:45.75:0,46,245	0/0:6,0:10:17.27:0,17,98	1/1:4,9:14:5.24:150,5,0	1/1:5,7:12:17.59:115,18,0	1/1:8,14:22:22.83:231,23,0	0/0:7,0:12:23.11:0,23,129	0/0:12,0:19:37.22:0,37,194	0/0:9,0:17:25.82:0,26,137	0/0:14,0:19:37.54:0,38,211
chr10	56394950	.	AAAAAAAC	A	2829.74	PASS	AB=0.974;AC=19;AF=0.339;AN=56;BaseQRankSum=-2.199;DP=587;FS=4.638;HRun=0;HaplotypeScore=137.3563;InbreedingCoeff=0.7460;MQ=58.02;MQ0=34;MQRankSum=-0.755;QD=16.94;ReadPosRankSum=-0.386;VQSLOD=2.6944;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:30:73.41:0,73,1513	0/0:12,0:12:36.04:0,36,840	0/0:70,0:17:19.57:0,20,271	0/0:61,0:22:27.78:0,28,275	0/0:30,0:30:79.33:0,79,1628	0/0:14,0:14:33.07:0,33,679	0/0:14,0:12:19.22:0,19,317	0/0:28,0:28:73.56:0,74,1068	1/1:10,0:10:9.98:157,10,0	1/1:20,2:22:49.73:474,50,0	1/1:6,14:17:32.87:456,33,0	0/0:15,0:14:39.02:0,39,614	0/0:10,0:10:26.64:0,27,443	0/0:8,0:7:18.02:0,18,344	0/1:7,0:6:58.54:79,0,59	0/0:17,0:16:39.27:0,39,628	0/0:37,0:33:84.01:0,84,1423	0/0:21,0:20:47.96:0,48,910	0/1:17,0:14:25.86:253,0,26	1/1:15,0:13:26.57:248,27,0	1/1:5,0:3:1.55:23,2,0	0/0:7,0:7:15.03:0,15,224	0/0:27,0:27:63.02:0,63,1036	0/0:18,0:17:21.07:0,21,567	0/1:11,1:12:1.49:156,0,1	1/1:22,4:24:40.01:619,40,0	1/1:20,4:23:26.91:419,27,0	1/1:9,0:6:17.95:145,18,0
chr10	56394951	.	AAAAAAC	A	3185.37	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=-3.101;DP=585;FS=6.166;HRun=0;HaplotypeScore=128.7151;InbreedingCoeff=0.8736;MQ=59.24;MQ0=33;MQRankSum=-2.417;QD=19.42;ReadPosRankSum=-0.569;VQSLOD=2.6705;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:30:70.80:0,71,1280	0/0:12,0:12:36.03:0,36,728	0/0:71,0:18:19.96:0,20,264	0/0:61,0:22:28.81:0,29,253	0/0:30,0:30:70.29:0,70,1306	0/0:14,0:14:33.06:0,33,569	0/0:14,0:12:15.85:0,16,242	0/0:28,0:28:72.94:0,73,949	1/1:10,0:10:23.12:215,23,0	1/1:8,14:22:47.95:569,48,0	1/1:19,0:17:32.90:380,33,0	0/0:16,0:15:41.99:0,42,568	0/0:10,0:10:26.55:0,27,374	0/0:8,0:7:18.02:0,18,321	0/1:7,0:6:47.18:92,0,47	0/0:17,0:16:26.28:0,26,513	0/0:37,0:33:83.88:0,84,1194	0/0:21,0:20:47.31:0,47,773	1/1:17,2:16:8.69:326,9,0	1/1:14,0:12:26.78:268,27,0	1/1:4,0:3:2.09:24,2,0	0/0:7,0:7:15.02:0,15,192	0/0:26,0:26:62.78:0,63,865	0/0:18,0:17:21.07:0,21,481	1/1:8,3:11:16.19:230,16,0	1/1:23,3:24:61.97:683,62,0	1/1:6,17:22:26.92:448,27,0	1/1:9,0:6:17.98:162,18,0
chr10	56394954	.	A	AC	1775.42	PASS	AB=0.900;AC=15;AF=0.268;AN=56;BaseQRankSum=-6.971;DP=567;FS=38.917;HRun=0;HaplotypeScore=94.8989;InbreedingCoeff=0.3196;MQ=60.22;MQ0=31;MQRankSum=3.237;QD=8.79;ReadPosRankSum=-1.476;VQSLOD=1.2282;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:30:66.24:0,66,543	0/1:11,1:12:19.48:119,0,19	0/0:73,0:19:17.68:0,18,187	0/0:62,0:23:10.25:0,10,158	0/0:28,0:28:68.77:0,69,525	0/1:13,1:14:84.59:105,0,85	1/1:4,7:10:11.14:78,11,0	1/1:31,0:31:11:443,11,0	0/0:9,0:9:23.56:0,24,159	0/0:20,0:20:44.78:0,45,247	0/0:17,0:15:30.08:0,30,157	0/1:15,0:15:8.71:228,0,9	0/0:10,0:10:23.92:0,24,214	0/0:8,0:8:15.93:0,16,122	0/0:8,0:7:7.84:0,8,38	0/1:15,1:15:86.60:119,0,87	0/1:33,2:31:30.88:300,0,31	0/1:19,1:19:55.79:149,0,56	0/0:18,0:15:31.57:0,32,212	0/0:13,0:11:28.40:0,28,180	0/0:3,0:2:5.58:0,6,33	1/1:8,0:8:11.72:82,12,0	1/1:23,0:23:42.88:282,43,0	0/1:6,11:17:32.21:47,0,32	0/0:9,0:9:16.92:0,17,81	0/0:24,0:22:58.87:0,59,375	0/0:23,0:22:22.80:0,23,87	0/0:8,0:6:17.83:0,18,128
chr10	56394955	.	AAC	A	2189.67	PASS	AB=0.952;AC=24;AF=0.429;AN=56;BaseQRankSum=-0.190;DP=567;FS=30.387;HRun=0;HaplotypeScore=97.8872;InbreedingCoeff=0.6736;MQ=60.48;MQ0=31;MQRankSum=-3.977;QD=10.23;ReadPosRankSum=0.391;VQSLOD=1.5664;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,1:29:22.94:0,23,430	0/0:12,0:12:23.74:0,24,336	0/0:73,0:19:16.04:0,16,212	0/0:62,0:23:14.95:0,15,205	0/1:27,2:29:75.29:75,0,359	0/1:13,1:14:0.30:0,0,233	0/0:11,0:10:6.26:0,6,93	0/0:32,0:32:79.20:0,79,633	1/1:9,0:9:15.23:142,15,0	1/1:20,0:20:48.62:360,49,0	1/1:17,0:15:32.57:214,33,0	0/0:15,0:15:44.77:0,45,376	0/0:9,0:9:7.15:0,7,121	0/0:8,0:8:20.92:0,21,179	0/1:7,0:6:5.19:48,0,5	0/1:15,1:15:26.82:27,0,207	0/0:33,1:31:10.87:0,11,465	0/0:19,1:19:3.77:0,4,278	1/1:19,1:17:38.89:332,39,0	1/1:14,0:12:32.19:227,32,0	1/1:3,0:2:3.47:26,3,0	0/0:8,0:8:17.54:0,18,117	0/0:21,0:21:45.78:0,46,406	0/0:18,0:18:23.31:0,23,208	1/1:9,0:9:15.91:118,16,0	1/1:24,0:22:62.73:500,63,0	1/1:23,0:22:26.50:182,26,0	1/1:9,0:6:17.95:143,18,0
chr10	56395896	.	GT	G	4796	PASS	AB=0.909;AC=23;AF=0.411;AN=56;BaseQRankSum=-0.818;DP=657;FS=1.034;HRun=10;HaplotypeScore=83.9780;InbreedingCoeff=0.9259;MQ=63.92;MQ0=5;MQRankSum=0.312;QD=18.38;ReadPosRankSum=-0.735;VQSLOD=5.0704;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,2:39:37.97:0,38,855	1/1:1,9:10:26.99:234,27,0	0/0:18,0:13:18.59:0,19,248	0/0:11,0:6:14.40:0,14,141	0/0:37,0:39:99:0,102,1090	1/1:1,22:23:65.99:573,66,0	1/1:2,20:22:56.97:495,57,0	1/1:11,16:26:13.11:370,13,0	0/1:17,2:20:7.12:7,0,367	0/0:30,0:32:79.47:0,79,913	0/0:18,0:18:48.13:0,48,531	1/1:3,24:27:65.98:571,66,0	0/0:16,0:16:36.10:0,36,398	0/0:20,0:21:62.99:0,63,666	0/0:19,0:19:45.09:0,45,485	1/1:1,15:17:44.02:370,44,0	1/1:4,29:33:44.80:618,45,0	1/1:12,22:34:48.25:505,48,0	0/0:23,1:25:58.71:0,59,653	0/0:27,0:28:62.99:0,63,669	0/0:9,0:11:29.73:0,30,285	1/1:2,5:8:17.03:136,17,0	1/1:2,16:17:47.99:416,48,0	1/1:2,19:22:59.02:501,59,0	0/0:17,1:17:13.05:0,13,372	0/0:43,0:43:99:0,99,1095	0/0:35,2:37:56.18:0,56,1053	0/0:20,0:20:39.03:0,39,400
chr10	56395933	.	G	GT	6447.84	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-13.936;DP=656;FS=1.058;HRun=8;HaplotypeScore=81.1893;InbreedingCoeff=0.9850;MQ=63.13;MQ0=4;MQRankSum=0.450;QD=25.19;ReadPosRankSum=-0.169;VQSLOD=5.2760;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:96.04:0,96,878	0/0:9,0:9:21.01:0,21,192	0/0:11,0:8:17.39:0,17,145	0/0:14,0:10:7.23:0,7,169	0/0:37,0:37:93.04:0,93,850	0/0:25,0:24:63.01:0,63,576	0/0:26,0:26:75:0,75,675	0/0:24,0:23:54.01:0,54,488	1/1:1,28:29:72.21:827,72,0	1/1:5,28:32:78.18:876,78,0	1/1:3,17:20:45.13:517,45,0	0/0:28,0:28:75.04:0,75,686	0/0:17,0:17:44.99:0,45,406	0/0:27,1:28:56.08:0,56,564	1/1:6,19:25:52.40:591,52,0	0/0:28,0:28:72.92:0,73,661	0/0:31,0:31:78.03:0,78,714	0/0:24,0:24:55.56:0,56,493	1/1:6,18:22:47.59:502,48,0	1/1:3,9:12:24.07:277,24,0	1/1:2,10:12:21.06:242,21,0	0/0:20,0:20:53.90:0,54,482	0/0:21,0:21:48.02:0,48,439	0/0:21,0:21:54.02:0,54,494	1/1:2,16:18:36.11:415,36,0	1/1:2,28:30:78.22:889,78,0	1/1:8,30:38:90.26:1035,90,0	1/1:2,12:15:24.07:277,24,0
chr10	56396254	.	C	CT	801.72	PASS	AB=0.941;AC=29;AF=0.518;AN=56;BaseQRankSum=4.806;DP=419;FS=6.363;HRun=14;HaplotypeScore=87.1875;InbreedingCoeff=0.1281;MQ=58.81;MQ0=17;MQRankSum=-1.923;QD=2.90;ReadPosRankSum=-4.677;VQSLOD=-0.7398;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:14,1:16:6.61:7,0,80	0/1:4,0:5:2.11:14,0,2	0/0:40,0:3:2.96:0,3,19	0/0:41,0:13:10.51:0,11,42	0/1:22,0:22:7.32:7,0,92	0/0:14,0:14:5.89:0,6,39	1/1:6,0:6:3.85:22,4,0	0/1:15,0:19:10.55:14,0,11	1/1:6,0:6:10.22:46,10,0	1/1:15,2:17:15.33:94,15,0	1/1:14,1:15:20.10:138,20,0	0/0:12,0:11:5.09:0,5,51	0/0:7,0:7:5.70:0,6,38	0/0:7,0:6:1.98:0,2,6	1/1:16,1:17:11.42:76,11,0	0/0:12,0:11:2.41:0,2,33	0/1:21,0:17:7.99:8,0,29	0/1:12,0:12:6.61:7,0,33	0/1:17,4:21:6.29:129,0,6	0/1:9,7:15:3.13:76,0,3	0/1:8,0:8:0:0,0,0	0/0:10,0:10:0.33:0,0,29	1/1:5,0:5:2.04:6,2,0	0/1:4,0:4:12.37:12,0,16	1/1:8,0:8:2.72:26,3,0	1/1:13,3:16:25.97:162,26,0	1/1:18,1:18:6.83:29,7,0	0/1:18,3:20:14.49:84,0,14
chr10	56396264	.	T	TG	30.62	PASS	AB=0.800;AC=3;AF=0.054;AN=56;BaseQRankSum=3.526;DP=423;FS=6.926;HRun=0;HaplotypeScore=63.4734;InbreedingCoeff=0.3291;MQ=52.10;MQ0=25;MQRankSum=-2.601;QD=1.28;ReadPosRankSum=3.042;VQSLOD=0.6919;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:29.37:0,29,349	0/1:6,2:7:13.97:14,0,51	0/0:47,0:1:2.99:0,3,23	0/0:60,0:14:12.29:0,12,106	0/0:20,0:19:54.46:0,54,541	0/0:15,0:15:32.03:0,32,256	0/0:5,0:5:8.91:0,9,65	1/1:11,5:15:17.19:116,17,0	0/0:6,0:6:11.39:0,11,62	0/0:16,0:16:33.76:0,34,241	0/0:12,0:11:1.82:0,2,53	0/0:11,0:10:23.74:0,24,216	0/0:7,0:7:17.99:0,18,183	0/0:5,0:4:12:0,12,103	0/0:18,0:18:19.87:0,20,160	0/0:9,0:7:14.85:0,15,140	0/0:20,0:16:40.49:0,40,308	0/0:14,0:14:34.79:0,35,273	0/0:23,0:22:44.55:0,45,357	0/0:11,0:10:5.87:0,6,99	0/0:5,0:5:5.99:0,6,51	0/0:8,0:8:12.82:0,13,123	0/0:7,0:6:5.71:0,6,31	0/0:5,0:5:8.91:0,9,86	0/0:9,0:9:12.75:0,13,82	0/0:14,0:14:21.02:0,21,159	0/0:17,0:16:8.16:0,8,38	0/0:22,0:21:13.50:0,13,162
chr10	56396266	.	T	TG	93.12	PASS	AB=0.950;AC=6;AF=0.107;AN=56;BaseQRankSum=3.636;DP=426;FS=4.044;HRun=0;HaplotypeScore=64.7975;InbreedingCoeff=0.2271;MQ=48.74;MQ0=25;MQRankSum=-2.723;QD=1.98;ReadPosRankSum=2.123;VQSLOD=1.9026;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:28.63:0,29,344	0/1:6,2:7:42.31:45,0,42	0/0:49,0:1:2.92:0,3,17	0/0:63,0:13:12.92:0,13,111	0/0:21,0:20:56.76:0,57,540	0/0:15,0:15:12.33:0,12,185	0/1:4,0:4:0.11:0,0,33	1/1:12,4:15:21.57:149,22,0	0/0:6,0:6:11.51:0,12,62	0/0:16,0:16:34.29:0,34,214	0/1:12,0:11:3.08:3,0,48	0/0:11,0:10:24.98:0,25,211	0/0:7,0:7:20.91:0,21,196	0/0:5,0:4:12:0,12,103	0/0:18,0:18:19.71:0,20,149	0/0:8,0:6:14.81:0,15,139	0/0:20,0:16:25.07:0,25,285	0/0:14,0:14:31.81:0,32,252	0/0:22,0:20:40.76:0,41,294	0/0:11,0:10:5.85:0,6,96	0/0:4,0:4:3:0,3,25	0/0:8,0:8:11.88:0,12,98	0/1:7,0:6:3.88:4,0,14	0/0:5,0:5:8.91:0,9,83	0/0:11,0:11:13.63:0,14,83	0/0:14,0:14:19.08:0,19,150	0/0:17,0:16:7.52:0,8,34	0/0:22,0:21:13.09:0,13,150
chr10	56396269	.	G	GT	2000.90	PASS	AB=0.977;AC=37;AF=0.661;AN=56;BaseQRankSum=-0.316;DP=435;FS=3.752;HRun=14;HaplotypeScore=64.5459;InbreedingCoeff=0.4446;MQ=49.56;MQ0=26;MQRankSum=-1.531;QD=5.45;ReadPosRankSum=-1.449;VQSLOD=2.0529;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:28.72:0,29,228	1/1:8,0:7:4.42:21,4,0	0/1:51,0:2:0:0,0,0	0/1:70,0:14:14.14:14,0,25	0/0:20,0:19:45.83:0,46,348	0/1:13,0:14:1.58:2,0,19	0/0:3,0:3:0.10:0,0,0	1/1:15,0:14:13.58:51,14,0	1/1:2,5:7:9.02:97,9,0	1/1:2,14:16:36.52:352,37,0	1/1:3,9:11:8.64:238,9,0	0/0:11,0:10:2.88:0,3,17	0/0:8,0:8:3.72:0,4,86	0/0:5,0:4:11.99:0,12,103	1/1:6,11:17:0.12:146,0,0	0/0:9,0:7:0.14:0,0,0	0/1:19,0:16:7.88:15,0,8	1/1:15,0:15:11.69:49,12,0	1/1:20,2:20:20.98:225,21,0	1/1:9,1:9:15.09:118,15,0	1/1:0,4:4:3.01:33,3,0	1/1:7,0:8:4.66:25,5,0	1/1:2,0:6:1.74:6,2,0	0/1:6,0:6:0.92:13,0,1	1/1:2,9:11:12.01:129,12,0	1/1:1,14:15:36.95:363,37,0	1/1:3,14:16:5.93:49,6,0	1/1:7,15:21:24.78:211,25,0
chr10	56396278	.	TG	T	1131.93	PASS	AB=0.969;AC=26;AF=0.464;AN=56;BaseQRankSum=2.558;DP=433;FS=1.246;HRun=1;HaplotypeScore=66.3944;InbreedingCoeff=0.1218;MQ=65.39;MQ0=29;MQRankSum=-4.530;QD=3.27;ReadPosRankSum=-1.192;VQSLOD=-0.5366;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:24.88:0,25,268	0/1:6,0:5:1.80:58,0,2	0/1:54,6:11:2.06:2,0,33	0/1:78,3:22:11.70:12,0,43	0/0:20,0:19:27.91:0,28,391	1/1:11,3:14:17.82:153,18,0	0/0:2,1:3:5.45:0,5,28	1/1:15,0:13:2.75:149,3,0	0/0:7,0:7:3.89:0,4,13	0/0:15,0:15:3.72:0,4,90	0/0:11,0:10:20.54:0,21,104	0/1:6,1:6:6.55:32,0,7	0/1:7,0:7:2.44:2,0,94	0/0:5,0:4:12.02:0,12,120	0/1:16,0:16:25.24:25,0,28	1/1:4,3:5:7.14:92,7,0	1/1:16,3:15:26.86:250,27,0	1/1:9,2:12:28.38:237,28,0	0/1:16,0:14:15.45:15,0,65	0/1:8,0:7:8.02:8,0,48	0/0:4,0:4:2.50:0,2,9	1/1:6,1:7:3.56:67,4,0	0/1:6,1:6:3.09:11,0,3	1/1:5,0:5:12.27:59,12,0	0/0:11,0:11:10.12:0,10,53	0/1:16,0:16:39.96:40,0,59	0/1:19,0:18:23.49:27,0,23	0/1:24,0:22:36:61,0,36
chr10	56398839	.	G	GC	13133.88	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-14.095;DP=586;FS=7.529;HRun=7;HaplotypeScore=54.6760;InbreedingCoeff=0.9972;MQ=85.59;MQ0=0;MQRankSum=-3.837;QD=29.92;ReadPosRankSum=3.889;VQSLOD=5.1016;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,111,1060	1/1:0,12:12:36.06:418,36,0	0/0:22,0:22:30.10:0,30,431	0/0:22,0:22:35.78:0,36,409	0/0:28,0:28:78.12:0,78,753	1/1:4,17:21:51.16:615,51,0	1/1:0,23:23:60.18:725,60,0	1/1:10,16:26:48.13:566,48,0	1/1:0,16:16:45.14:543,45,0	1/1:3,15:18:45.12:530,45,0	1/1:1,6:7:21.05:242,21,0	1/1:2,23:25:63.19:761,63,0	0/0:17,0:17:48.07:0,48,463	0/0:15,0:15:45.07:0,45,434	1/1:2,35:37:96.29:1160,96,0	1/1:3,24:27:57.17:689,57,0	1/1:4,29:33:78.24:940,78,0	1/1:3,23:26:57.17:689,57,0	1/1:3,12:15:36.11:435,36,0	1/1:0,6:6:18.06:217,18,0	1/1:2,16:18:45.14:543,45,0	1/1:1,12:13:33.10:398,33,0	1/1:0,10:10:30.09:362,30,0	1/1:2,18:20:48.15:580,48,0	1/1:0,22:22:57.17:687,57,0	1/1:2,20:22:60.12:695,60,0	1/1:1,27:28:72.11:869,72,0	1/1:1,13:14:39.12:471,39,0
chr10	56400559	.	C	CT	1607.32	PASS	AB=0.749;AC=24;AF=0.429;AN=56;BaseQRankSum=-5.352;DP=518;FS=13.661;HRun=14;HaplotypeScore=70.8262;InbreedingCoeff=0.5364;MQ=77.57;MQ0=1;MQRankSum=0.074;QD=6.28;ReadPosRankSum=-2.695;VQSLOD=0.4101;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:40:52.98:0,53,304	0/1:3,5:8:5.52:67,0,6	0/0:21,0:18:8.86:0,9,66	0/1:17,0:16:2.41:2,0,8	0/0:22,0:24:33.42:0,33,214	0/0:7,0:11:20.84:0,21,114	0/0:15,0:18:26.64:0,27,152	1/1:13,12:26:29.66:224,30,0	1/1:5,8:13:9:79,9,0	1/1:7,15:22:19.34:277,19,0	1/1:3,8:12:7.17:91,7,0	0/0:16,0:21:37.50:0,37,215	0/0:18,0:18:31.87:0,32,199	0/0:16,0:19:29.59:0,30,171	0/1:8,10:18:16.25:113,0,16	0/0:12,0:15:21.67:0,22,127	0/0:20,1:29:38.06:0,38,301	0/0:18,0:19:44.27:0,44,286	1/1:14,11:28:2.02:217,2,0	1/1:4,7:11:20.57:148,21,0	1/1:4,8:13:5.17:68,5,0	0/1:7,0:9:5.06:5,0,17	0/0:7,0:7:8.74:0,9,57	0/0:16,0:20:16.09:0,16,56	0/1:4,8:15:25.93:71,0,26	0/1:12,14:29:12.07:185,0,12	1/1:8,16:25:17.95:149,18,0	1/1:2,6:8:12:105,12,0
chr10	56401195	.	GGTGTGTGTGT	G	2017.06	PASS	AB=0.814;AC=15;AF=0.288;AN=52;BaseQRankSum=3.427;DP=467;FS=11.249;HRun=0;HaplotypeScore=123.7434;InbreedingCoeff=0.5315;MQ=54.00;MQ0=26;MQRankSum=-5.740;QD=12.45;ReadPosRankSum=1.890;VQSLOD=1.8092;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:13:24.08:0,24,895	0/0:4,0:5:9.03:0,9,319	./.	./.	0/0:6,0:5:3.01:0,3,84	0/1:15,5:19:56.73:252,0,57	1/1:11,0:11:3.01:74,3,0	0/0:21,0:20:23.19:0,23,492	0/0:12,0:12:12.04:0,12,394	0/0:13,0:17:24.08:0,24,805	0/0:5,0:8:9.02:0,9,241	1/1:9,3:12:9.03:246,9,0	0/0:10,0:9:9.03:0,9,360	0/0:12,0:11:12.04:0,12,368	0/0:5,0:4:6.02:0,6,283	1/1:13,11:23:21.07:622,21,0	1/1:18,5:23:12.04:317,12,0	0/1:11,3:14:91.64:166,0,92	0/0:14,0:13:9.03:0,9,285	0/0:12,0:16:9.03:0,9,263	0/0:24,0:22:33.11:0,33,1277	1/1:10,1:11:6.02:124,6,0	1/1:15,1:17:9.03:218,9,0	0/1:21,6:27:14.94:166,0,15	0/0:23,0:23:15.03:0,15,530	0/0:15,0:17:27.09:0,27,1035	0/0:13,0:19:15.52:0,16,448	0/0:5,0:8:15.05:0,15,513
chr10	56401367	.	CAAA	C	1662.80	PASS	AB=0.875;AC=19;AF=0.339;AN=56;BaseQRankSum=0.872;DP=461;FS=20.754;HRun=16;HaplotypeScore=67.9036;InbreedingCoeff=0.8817;MQ=50.43;MQ0=11;MQRankSum=3.136;QD=11.24;ReadPosRankSum=6.289;VQSLOD=-0.5586;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:44:73.36:0,73,1092	0/0:1,0:3:9.03:0,9,126	0/1:6,0:5:2.47:2,0,125	0/0:5,0:4:6.02:0,6,76	0/0:31,0:29:62.90:0,63,825	1/1:6,7:14:20.91:211,21,0	1/1:3,7:10:7.41:94,7,0	0/0:18,0:22:54.09:0,54,688	0/0:4,0:10:15.05:0,15,218	0/0:10,0:13:32.99:0,33,415	0/0:15,0:20:33.90:0,34,402	1/1:4,6:11:11.66:114,12,0	0/0:9,0:8:8.95:0,9,95	0/0:10,0:11:23.89:0,24,251	0/0:8,0:14:27.06:0,27,353	1/1:13,5:19:16.10:191,16,0	1/1:7,15:24:18.09:322,18,0	1/1:4,14:18:32.96:355,33,0	0/0:16,0:18:42.07:0,42,559	0/0:10,0:15:30.08:0,30,406	0/0:7,0:19:18.03:0,18,220	1/1:5,9:17:23.88:270,24,0	1/1:4,6:10:11.60:129,12,0	1/1:5,10:14:17.80:179,18,0	0/0:9,0:17:21.07:0,21,294	0/0:12,0:21:42.05:0,42,529	0/0:11,0:15:30.07:0,30,394	0/0:5,0:14:33.03:0,33,419
chr10	56403362	.	C	CA	1720.30	PASS	AB=0.800;AC=20;AF=0.357;AN=56;BaseQRankSum=-1.314;DP=564;FS=2.643;HRun=14;HaplotypeScore=91.9599;InbreedingCoeff=0.3406;MQ=74.06;MQ0=7;MQRankSum=-1.533;QD=5.44;ReadPosRankSum=-1.683;VQSLOD=2.4506;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:25.34:0,25,238	0/0:5,0:5:11.80:0,12,76	0/1:52,0:26:20.71:21,0,37	0/1:56,0:27:3.87:4,0,37	0/0:18,0:18:31.41:0,31,191	0/0:14,0:14:19.39:0,19,118	0/0:11,0:12:31.59:0,32,198	0/0:33,0:32:64.53:0,65,414	0/1:6,6:13:25.95:63,0,26	0/1:8,12:21:9.50:185,0,10	1/1:5,9:15:13.19:152,13,0	0/0:11,0:11:18.95:0,19,116	0/0:13,0:16:28.11:0,28,174	0/0:17,0:17:31.52:0,32,197	1/1:5,7:12:1.93:123,2,0	0/0:18,0:21:20.45:0,20,162	0/0:14,1:19:15.63:0,16,181	0/0:17,1:21:13.76:0,14,177	0/1:16,2:18:4.18:126,0,4	1/1:5,19:24:53.81:445,54,0	1/1:4,4:8:7.24:56,7,0	0/1:12,1:14:3.30:3,0,93	0/0:19,0:20:46.28:0,46,293	0/0:12,1:13:3.17:0,3,142	1/1:12,5:19:3.19:200,3,0	1/1:9,8:18:20.85:144,21,0	0/1:15,17:32:40.90:231,0,41	0/1:5,6:12:11.69:146,0,12
chr10	56403418	.	G	GGTGTGTGT	4554.08	PASS	AB=0.750;AC=37;AF=0.740;AN=50;BaseQRankSum=-1.041;DP=486;FS=4.045;HRun=0;HaplotypeScore=162.5203;InbreedingCoeff=0.6527;MQ=58.29;MQ0=10;MQRankSum=-4.891;QD=14.64;ReadPosRankSum=-2.919;VQSLOD=3.7110;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:19:23.91:0,24,419	0/0:2,0:7:12.04:0,12,198	./.	./.	0/0:14,0:20:42.14:0,42,902	1/1:15,3:20:6.02:244,6,0	0/1:12,4:18:0.01:0,0,0	0/0:22,0:25:9.92:0,10,145	1/1:14,0:13:9:194,9,0	1/1:19,0:19:9.03:270,9,0	1/1:16,0:17:6:89,6,0	1/1:12,0:14:3.48:65,3,0	0/0:16,0:17:14.97:0,15,301	0/0:18,0:18:24.08:0,24,599	1/1:16,0:16:3.01:104,3,0	1/1:14,2:18:12.04:468,12,0	1/1:16,0:15:6.02:147,6,0	1/1:10,4:14:9.03:368,9,0	1/1:18,0:17:18.06:522,18,0	1/1:18,0:18:3.01:90,3,0	./.	1/1:9,2:12:3.48:123,3,0	1/1:12,0:17:3.01:64,3,0	1/1:12,1:13:3.01:122,3,0	1/1:12,1:12:12.04:389,12,0	1/1:18,0:18:18.06:537,18,0	1/1:23,0:23:18.06:549,18,0	1/1:5,0:7:6.02:209,6,0
chr10	56408367	.	CT	C	700.04	PASS	AB=0.791;AC=4;AF=0.071;AN=56;BaseQRankSum=8.459;DP=699;FS=10.688;HRun=1;HaplotypeScore=72.6165;InbreedingCoeff=-0.0779;MQ=74.36;MQ0=0;MQRankSum=-5.872;QD=6.67;ReadPosRankSum=0.528;VQSLOD=-0.4613;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:33:96.33:0,96,1534	0/0:10,0:10:30.09:0,30,456	0/0:20,0:21:34.58:0,35,743	0/0:17,0:17:49.66:0,50,709	0/0:8,0:8:24.08:0,24,376	0/0:17,0:17:51.17:0,51,815	0/0:28,0:28:84.29:0,84,1343	0/0:41,0:41:99:0,117,1828	0/0:26,0:26:78.27:0,78,1236	0/0:24,0:24:72.23:0,72,1113	0/0:7,0:7:15.05:0,15,232	0/0:37,0:37:99:0,111,1771	0/0:22,0:22:66.23:0,66,1054	0/0:30,0:30:87.25:0,87,1341	0/0:29,0:29:87.27:0,87,1345	0/0:28,0:28:84.28:0,84,1316	0/0:38,0:38:99:0,114,1814	0/0:29,0:29:87.30:0,87,1391	0/1:26,8:34:99:166,0,922	0/0:12,0:12:30.10:0,30,480	0/0:74,0:74:99:0,217,3453	0/0:9,0:9:24.08:0,24,376	0/0:8,0:8:21.07:0,21,336	0/0:32,0:32:96.28:0,96,1506	0/0:13,0:13:33.11:0,33,527	0/1:18,7:25:99:196,0,771	0/1:25,12:37:99:391,0,1064	0/1:7,2:9:56.76:57,0,308
chr10	56409029	.	G	GA	313.30	PASS	AB=0.731;AC=1;AF=0.018;AN=56;BaseQRankSum=4.068;DP=665;FS=23.042;HRun=6;HaplotypeScore=64.4870;InbreedingCoeff=-0.0183;MQ=78.26;MQ0=0;MQRankSum=-5.770;QD=8.24;ReadPosRankSum=-3.502;VQSLOD=-0.6055;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:98.65:0,99,965	0/0:8,0:8:24.05:0,24,245	0/0:22,0:22:53.94:0,54,517	0/0:18,0:18:33.53:0,34,333	0/0:24,0:24:66.15:0,66,673	0/0:16,0:16:48.05:0,48,471	0/0:22,0:22:63.14:0,63,643	0/0:18,0:18:45.08:0,45,452	0/0:20,0:20:57.13:0,57,581	0/0:28,0:28:78.17:0,78,795	0/0:19,0:19:51.11:0,51,520	0/0:22,0:22:60.13:0,60,611	0/0:30,0:30:84.15:0,84,843	0/0:32,0:32:87.18:0,87,880	0/0:26,0:26:75.16:0,75,758	0/0:28,0:28:78.16:0,78,784	0/0:37,0:37:96.19:0,96,970	0/0:20,0:20:57.13:0,57,581	0/1:24,14:38:99:388,0,446	0/0:17,0:16:48.09:0,48,482	0/0:34,0:34:93.21:0,93,949	0/0:20,0:20:57.09:0,57,572	0/0:20,0:20:57.13:0,57,581	0/0:24,0:24:66.11:0,66,662	0/0:19,0:19:54.11:0,54,545	0/0:25,2:27:37.43:0,37,696	0/0:27,0:27:66.13:0,66,666	0/0:12,0:12:36.08:0,36,367
chr10	56410651	.	TC	T	4013.91	PASS	AB=0.611;AC=5;AF=0.089;AN=56;BaseQRankSum=16.745;DP=743;FS=126.320;HRun=3;HaplotypeScore=108.0412;InbreedingCoeff=-0.1005;MQ=74.07;MQ0=0;MQRankSum=-11.235;QD=16.32;ReadPosRankSum=1.110;VQSLOD=-0.6304;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,120,1545	0/0:5,0:5:15.05:0,15,216	0/0:18,0:18:51.17:0,51,728	0/0:19,0:19:54.09:0,54,722	0/0:9,0:9:27.09:0,27,389	0/0:18,0:18:51.13:0,51,667	0/0:29,0:29:84.22:0,84,1105	0/0:29,0:29:81.24:0,81,1114	0/0:26,0:26:72.18:0,72,947	0/0:17,0:17:48.13:0,48,618	0/0:8,0:8:24.08:0,24,346	0/0:37,0:37:99:0,108,1415	0/0:18,0:18:51.09:0,51,624	0/0:22,0:22:63.16:0,63,834	0/0:30,0:30:90.26:0,90,1229	0/0:23,0:23:63.16:0,63,822	0/0:36,0:36:99:0,108,1555	0/0:17,0:17:51.15:0,51,697	0/1:33,33:65:99:1000,0,737	0/1:18,27:45:99:666,0,559	0/0:40,0:40:99:0,102,1339	0/0:5,0:5:15.05:0,15,215	0/0:7,0:7:18.06:0,18,259	0/0:33,0:33:93.27:0,93,1278	0/0:5,0:5:15.05:0,15,215	0/1:23,33:56:99:870,0,513	0/1:11,34:44:99:956,0,206	0/1:8,26:34:99:522,0,233
chr10	56410907	.	TG	T	4797.79	PASS	AB=0.600;AC=5;AF=0.089;AN=56;BaseQRankSum=17.367;DP=710;FS=1.132;HRun=1;HaplotypeScore=107.4165;InbreedingCoeff=-0.0983;MQ=80.15;MQ0=0;MQRankSum=-13.418;QD=21.42;ReadPosRankSum=-0.141;VQSLOD=4.8036;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,160,2542	0/0:7,0:7:21.04:0,21,310	0/0:19,0:19:54.01:0,54,809	0/0:22,0:22:53.90:0,54,755	0/0:15,0:15:45.14:0,45,693	0/0:15,0:15:45.15:0,45,719	0/0:28,0:28:84.29:0,84,1338	0/0:24,0:24:69.21:0,69,1076	0/0:12,0:12:36.12:0,36,576	0/0:21,0:21:57.19:0,57,890	0/0:12,0:12:36.12:0,36,576	0/0:28,0:28:81.28:0,81,1293	0/0:20,0:20:60.20:0,60,957	0/0:20,0:20:60.20:0,60,956	0/0:21,0:21:63.21:0,63,1002	0/0:21,0:21:63.21:0,63,1006	0/0:36,0:36:99:0,108,1722	0/0:22,0:22:66.20:0,66,1030	0/1:20,42:59:99:1304,0,720	0/1:10,18:28:99:514,0,407	0/0:31,0:31:93.32:0,93,1483	0/0:9,0:9:27.07:0,27,398	0/0:12,0:12:36.11:0,36,549	0/0:20,0:20:57.19:0,57,909	0/0:17,0:17:51.17:0,51,808	0/1:22,42:64:99:1507,0,866	0/1:25,36:61:99:1206,0,1017	0/1:2,7:9:68.85:266,0,69
chr10	56411478	.	C	CA	162.87	PASS	AB=0.667;AC=1;AF=0.018;AN=56;BaseQRankSum=4.805;DP=684;FS=19.717;HRun=0;HaplotypeScore=67.6508;InbreedingCoeff=-0.0183;MQ=88.85;MQ0=0;MQRankSum=-4.822;QD=10.18;ReadPosRankSum=1.369;VQSLOD=2.0007;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:63,0:63:99:0,184,2558	0/0:10,0:10:27.09:0,27,378	0/0:19,0:19:50.71:0,51,645	0/0:30,0:30:75.18:0,75,988	0/0:18,0:18:54.17:0,54,737	0/0:22,0:22:63.21:0,63,880	0/0:34,0:34:99:0,102,1426	0/0:33,0:33:93.29:0,93,1270	0/0:27,0:27:78.25:0,78,1072	0/0:24,0:24:69.23:0,69,962	0/0:17,0:17:48.16:0,48,671	0/0:21,0:21:63.19:0,63,863	0/0:22,0:22:66.21:0,66,904	0/0:27,0:27:81.27:0,81,1133	0/0:28,0:28:81.27:0,81,1132	0/0:31,0:31:90.28:0,90,1226	0/0:19,0:19:57.19:0,57,797	0/0:31,0:31:93.31:0,93,1301	0/0:24,0:24:66.21:0,66,907	0/1:8,8:16:99:237,0,287	0/0:40,0:40:99:0,117,1616	0/0:18,0:18:51.17:0,51,710	0/0:19,0:19:57.19:0,57,797	0/0:22,0:22:66.22:0,66,921	0/0:18,0:18:51.17:0,51,713	0/0:20,0:20:54.17:0,54,740	0/0:22,0:22:66.21:0,66,906	0/0:9,0:9:27.09:0,27,378
chr10	56411481	.	A	AG	137.63	PASS	AB=0.680;AC=1;AF=0.018;AN=56;BaseQRankSum=4.818;DP=665;FS=19.670;HRun=1;HaplotypeScore=65.5056;InbreedingCoeff=-0.0182;MQ=88.01;MQ0=0;MQRankSum=-4.833;QD=8.10;ReadPosRankSum=1.242;VQSLOD=-0.4986;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:62,0:62:99:0,187,2559	0/0:10,0:10:30.10:0,30,419	0/0:16,0:16:42.14:0,42,577	0/0:30,0:30:72.21:0,72,949	0/0:17,0:17:51.17:0,51,711	0/0:21,0:21:60.20:0,60,838	0/0:34,0:34:99:0,99,1384	0/0:28,0:28:84.27:0,84,1145	0/0:25,0:25:75.24:0,75,1031	0/0:23,0:23:69.21:0,69,930	0/0:18,0:18:48.16:0,48,671	0/0:21,0:21:60.20:0,60,838	0/0:22,0:22:63.17:0,63,827	0/0:27,0:27:81.27:0,81,1132	0/0:26,0:26:78.24:0,78,1055	0/0:30,0:30:90.29:0,90,1241	0/0:19,0:19:57.19:0,57,797	0/0:32,0:32:93.26:0,93,1275	0/0:24,0:24:69.22:0,69,948	0/1:9,8:17:99:212,0,287	0/0:37,0:37:99:0,111,1516	0/0:17,0:17:51.17:0,51,713	0/0:19,0:19:57.19:0,57,795	0/0:22,0:22:63.17:0,63,844	0/0:18,0:18:54.18:0,54,755	0/0:20,0:20:60.19:0,60,820	0/0:21,0:21:63.19:0,63,861	0/0:9,0:9:27.09:0,27,377
chr10	56412811	.	GAA	G	5492.07	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-7.254;DP=589;FS=5.028;HRun=12;HaplotypeScore=85.9264;InbreedingCoeff=0.9880;MQ=65.17;MQ0=7;MQRankSum=-2.152;QD=22.60;ReadPosRankSum=3.657;VQSLOD=4.7563;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:27:74.19:0,74,1021	0/0:2,0:7:11.92:0,12,117	0/0:30,0:14:26.88:0,27,255	0/0:26,0:11:17.32:0,17,161	0/0:17,0:17:38.69:0,39,497	0/0:1,0:9:24.02:0,24,225	0/0:5,0:19:36.04:0,36,358	0/0:8,0:38:95.64:0,96,851	1/1:1,8:9:15.03:153,15,0	1/1:4,23:28:65.82:706,66,0	1/1:0,21:22:53.84:601,54,0	0/0:4,0:18:36.02:0,36,334	0/0:11,0:11:29.99:0,30,380	0/0:15,0:15:42.14:0,42,607	1/1:4,26:30:60.12:610,60,0	0/0:6,0:16:20.78:0,21,232	0/0:15,0:36:64.20:0,64,621	0/0:4,0:15:27:0,27,247	1/1:5,15:17:47.98:462,48,0	1/1:3,24:27:63.08:637,63,0	1/1:3,24:27:54.09:548,54,0	0/0:4,0:17:34.84:0,35,262	0/0:2,0:25:47.58:0,48,455	0/0:3,0:19:48.06:0,48,470	1/1:1,13:15:14.75:204,15,0	1/1:1,17:19:53.82:520,54,0	1/1:1,20:22:41.53:479,42,0	1/1:2,21:24:50.80:571,51,0
chr10	56414611	.	CAA	C	1696.99	PASS	AB=0.833;AC=21;AF=0.375;AN=56;BaseQRankSum=1.956;DP=572;FS=0.449;HRun=17;HaplotypeScore=77.5664;InbreedingCoeff=0.7540;MQ=47.02;MQ0=24;MQRankSum=3.265;QD=7.10;ReadPosRankSum=2.221;VQSLOD=0.0774;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,1:31:41.80:0,42,545	0/0:10,0:11:16.77:0,17,153	0/0:5,0:3:9.02:0,9,95	0/0:8,0:7:9.51:0,10,87	0/0:26,0:29:55.36:0,55,547	0/0:10,0:17:31.75:0,32,284	0/0:20,0:22:45.51:0,46,375	0/0:26,1:29:40.27:0,40,592	1/1:16,6:19:20.22:154,20,0	1/1:13,11:25:31.69:234,32,0	1/1:8,8:18:1.81:111,2,0	0/0:13,1:22:4.65:0,5,179	0/0:18,0:19:16.43:0,16,245	0/0:19,0:17:37.85:0,38,319	1/1:16,8:23:0.54:99,1,0	0/0:15,0:23:48.68:0,49,404	0/0:9,0:14:20.93:0,21,182	0/0:5,0:11:11.18:0,11,115	1/1:9,10:19:39.92:305,40,0	1/1:11,10:20:7.48:159,7,0	0/1:20,4:23:17.09:92,0,17	0/0:14,0:13:26.30:0,26,254	0/0:16,0:21:18.03:0,18,232	0/0:17,1:18:2.78:0,3,214	1/1:10,10:19:7.35:151,7,0	1/1:6,8:19:37.39:249,37,0	1/1:15,11:25:19.45:203,19,0	1/1:8,10:14:10.57:139,11,0
chr10	56415342	.	A	AAC	113.35	PASS	AB=0.714;AC=1;AF=0.018;AN=56;BaseQRankSum=5.616;DP=566;FS=1.213;HRun=0;HaplotypeScore=96.5614;InbreedingCoeff=-0.0195;MQ=77.33;MQ0=7;MQRankSum=-1.195;QD=11.33;ReadPosRankSum=-1.376;VQSLOD=3.3489;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:66.22:0,66,1006	0/0:7,0:7:18.06:0,18,276	0/0:50,0:37:23.13:0,23,865	0/0:48,0:29:13.96:0,14,485	0/0:15,0:15:45.13:0,45,648	0/0:16,0:16:41.73:0,42,606	0/0:11,0:11:30.10:0,30,459	0/0:27,0:27:75.23:0,75,1090	0/0:12,0:12:36.08:0,36,525	0/0:12,0:12:33.11:0,33,483	0/0:14,0:14:39.13:0,39,586	0/0:16,0:16:45.13:0,45,638	0/0:22,0:22:57.19:0,57,869	0/0:21,0:21:63.21:0,63,944	0/0:25,0:25:69.19:0,69,1030	0/0:27,0:27:75.23:0,75,1105	0/0:30,0:30:87.23:0,87,1228	0/0:15,0:15:42.11:0,42,618	0/0:20,0:20:57.18:0,57,849	0/0:17,0:17:48.13:0,48,700	0/0:16,0:15:42.12:0,42,617	0/0:7,0:7:21.07:0,21,320	0/0:18,0:18:54.10:0,54,796	0/0:24,0:24:72.13:0,72,1026	0/0:20,0:20:53.96:0,54,756	0/0:25,0:25:75.16:0,75,1049	0/0:13,0:13:39.12:0,39,575	0/1:6,4:10:99:188,0,245
chr10	56415953	.	CGTGT	C	5529.51	PASS	AB=0.835;AC=26;AF=0.500;AN=52;BaseQRankSum=3.101;DP=663;FS=4.718;HRun=0;HaplotypeScore=127.9433;InbreedingCoeff=0.8301;MQ=59.36;MQ0=4;MQRankSum=-2.716;QD=15.40;ReadPosRankSum=1.186;VQSLOD=4.5882;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:30:53.39:0,53,996	1/1:4,0:9:15.02:140,15,0	./.	./.	0/0:25,0:24:32.85:0,33,661	0/0:14,0:28:45.15:0,45,838	0/0:12,0:19:26.73:0,27,382	0/1:25,0:37:25.08:175,0,25	1/1:6,7:13:12.04:193,12,0	1/1:17,12:30:40.37:595,40,0	1/1:12,15:29:39.11:572,39,0	0/0:9,0:15:21.07:0,21,412	0/0:26,0:29:62.89:0,63,1148	0/0:19,0:22:38.59:0,39,679	1/1:5,16:23:30.10:462,30,0	0/0:11,0:24:39.13:0,39,679	0/0:6,0:17:24.08:0,24,440	0/0:6,0:11:14.33:0,14,244	1/1:14,4:19:12.03:160,12,0	1/1:22,22:46:48.13:688,48,0	1/1:13,16:29:27.09:435,27,0	0/0:7,0:18:23.11:0,23,393	0/0:9,0:18:27.08:0,27,502	0/1:16,2:32:51.67:52,0,652	1/1:10,11:23:30.09:462,30,0	1/1:16,9:26:29.99:430,30,0	1/1:9,11:21:30.09:463,30,0	1/1:4,16:22:45.15:704,45,0
chr10	56418341	.	T	TTA	1236.56	PASS	AB=0.976;AC=23;AF=0.479;AN=48;BaseQRankSum=-0.183;DP=236;FS=2.586;HRun=0;HaplotypeScore=33.8166;InbreedingCoeff=0.5637;MQ=84.25;MQ0=3;MQRankSum=-0.363;QD=9.09;ReadPosRankSum=-2.979;VQSLOD=2.3248;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:23,2:26:41.51:42,0,496	1/1:1,3:5:15.04:214,15,0	0/1:12,0:8:0.04:0,0,0	0/1:15,0:9:9.27:9,0,24	0/0:6,0:6:12.04:0,12,143	0/0:14,0:14:27:0,27,303	0/0:5,0:5:12.02:0,12,132	1/1:18,17:36:51.17:803,51,0	1/1:4,0:4:3:26,3,0	1/1:10,0:12:6.88:55,7,0	1/1:2,0:2:0.89:2,1,0	0/0:6,0:6:15.05:0,15,179	0/0:7,0:7:12.04:0,12,143	0/0:6,0:6:6.02:0,6,71	1/1:1,0:3:3:26,3,0	0/0:6,0:6:15.05:0,15,179	0/0:20,0:20:51.12:0,51,593	0/0:11,0:11:24.07:0,24,285	1/1:2,1:5:9:91,9,0	./.	./.	./.	0/0:0,0:1:2.84:0,3,14	0/0:5,0:5:9.03:0,9,107	1/1:4,0:6:3:26,3,0	1/1:2,0:4:6:53,6,0	1/1:2,0:5:6:52,6,0	./.
chr10	56422587	.	G	GTGTATGTA	5225.86	PASS	AB=0.896;AC=24;AF=0.444;AN=54;BaseQRankSum=7.034;DP=887;FS=6.870;HRun=0;HaplotypeScore=198.2198;InbreedingCoeff=0.2205;MQ=60.63;MQ0=3;MQRankSum=-5.936;QD=9.82;ReadPosRankSum=-3.838;VQSLOD=2.2496;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:81.15:0,81,1609	0/0:13,0:13:8.99:0,9,108	./.	0/0:28,0:15:3.01:0,3,32	0/0:29,0:29:63.18:0,63,1254	0/1:19,0:19:31.90:153,0,32	0/0:31,0:30:29.81:0,30,356	0/0:38,0:38:37.44:0,37,368	1/1:13,20:38:6.02:228,6,0	1/1:15,22:45:72.49:1054,72,0	1/1:8,9:19:1.71:4,2,0	0/1:42,0:42:52.94:53,0,196	0/0:31,0:31:54.16:0,54,1149	0/0:29,0:29:69.08:0,69,1435	0/1:17,32:54:37.23:215,0,37	0/1:51,0:51:99:312,0,280	0/1:29,0:29:34.47:34,0,83	0/1:21,0:21:22.67:23,0,297	1/1:30,0:30:29.92:461,30,0	1/1:8,0:21:3.01:35,3,0	0/1:36,0:35:24.89:569,0,25	0/0:22,0:22:5.99:0,6,63	0/0:24,0:24:6.02:0,6,90	0/0:36,0:36:0.06:0,0,42	0/1:9,21:34:20.49:35,0,20	1/1:35,0:36:70.35:998,70,0	1/1:14,23:39:6.02:244,6,0	1/1:18,0:18:48.15:807,48,0
chr10	56422625	.	G	GTACGTACC	6374.27	PASS	AB=0.922;AC=32;AF=0.571;AN=56;BaseQRankSum=-1.549;DP=863;FS=8.323;HRun=0;HaplotypeScore=204.1443;InbreedingCoeff=0.0102;MQ=58.55;MQ0=7;MQRankSum=-4.122;QD=8.95;ReadPosRankSum=-5.103;VQSLOD=1.5313;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,111,1951	1/1:1,10:12:2.61:13,3,0	0/0:7,0:5:8:0,8,50	0/0:9,0:5:5.96:0,6,45	0/0:30,0:30:86.82:0,87,1350	1/1:1,21:29:8.99:282,9,0	1/1:28,0:27:50.23:874,50,0	1/1:41,0:34:86.64:902,87,0	0/1:37,0:37:99:219,0,241	0/1:41,0:41:99:394,0,109	0/1:22,0:22:29.02:29,0,156	1/1:2,37:46:2.48:130,2,0	0/0:32,0:32:93.04:0,93,1786	0/0:34,0:34:99:0,102,1835	0/1:47,0:47:99:194,0,246	0/1:6,48:58:0.56:567,0,1	1/1:1,13:17:3.01:100,3,0	1/1:25,0:25:48.85:830,49,0	0/1:20,0:15:99:195,0,126	0/1:27,0:27:99:105,0,152	0/1:41,0:40:99:218,0,241	1/1:0,30:38:3.01:43,3,0	1/1:0,23:32:0.15:0,0,0	0/1:4,20:27:18.38:18,0,38	0/1:27,0:27:63.72:64,0,132	0/1:36,0:36:99:457,0,195	0/1:41,0:41:99:317,0,233	1/1:19,0:19:9.20:424,9,0
chr10	56426796	.	TTG	T	602.41	PASS	AB=0.866;AC=27;AF=0.750;AN=36;BaseQRankSum=3.288;DP=292;FS=21.711;HRun=0;HaplotypeScore=45.4565;InbreedingCoeff=-0.0093;MQ=71.23;MQ0=7;MQRankSum=0.277;QD=3.17;ReadPosRankSum=-0.040;VQSLOD=0.3009;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:17,7:24:8.98:96,9,0	./.	./.	./.	./.	./.	1/1:13,1:12:3.01:32,3,0	./.	1/1:4,0:4:2.84:14,3,0	0/1:6,0:9:6.91:19,0,7	./.	1/1:2,1:3:3.01:32,3,0	0/0:11,0:10:9.01:0,9,104	0/0:8,0:7:2.99:0,3,24	./.	1/1:5,0:6:2.84:14,3,0	0/1:11,4:17:9.12:95,0,9	0/1:8,1:9:23.16:23,0,37	1/1:11,0:13:8.62:46,9,0	1/1:8,0:9:2.84:14,3,0	0/1:21,0:19:8.11:8,0,38	./.	0/1:9,1:10:18.87:26,0,19	1/1:10,5:16:2.98:214,3,0	./.	1/1:10,0:13:8.52:42,9,0	1/1:7,0:9:5.68:28,6,0	1/1:6,0:8:2.84:14,3,0
chr10	56426991	.	C	CG	1788.76	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-0.468;DP=308;FS=0.599;HRun=2;HaplotypeScore=37.4543;InbreedingCoeff=0.8082;MQ=54.71;MQ0=28;MQRankSum=-4.328;QD=21.81;ReadPosRankSum=-0.733;VQSLOD=3.1900;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:28:66.16:0,66,780	0/0:2,0:2:3.01:0,3,37	0/0:24,0:3:5.97:0,6,51	0/0:32,0:9:14.16:0,14,85	0/0:8,0:8:18.03:0,18,206	0/0:8,0:8:21.04:0,21,234	0/0:9,0:9:14.97:0,15,157	0/0:27,0:21:57.15:0,57,667	1/1:1,3:4:5.81:54,6,0	1/1:4,9:12:27.05:331,27,0	1/1:0,8:8:20.98:267,21,0	0/0:3,0:3:2.96:0,3,19	0/0:3,0:2:6.01:0,6,65	0/0:6,0:6:12.02:0,12,136	1/1:3,1:4:11.99:131,12,0	0/0:4,0:4:11.97:0,12,126	0/0:34,0:32:84.10:0,84,959	0/0:13,0:12:33.04:0,33,363	1/1:4,6:7:18.03:220,18,0	1/1:3,1:4:3.01:42,3,0	1/1:7,2:9:15.04:193,15,0	0/0:3,0:2:6.02:0,6,74	0/0:7,0:7:14.78:0,15,157	0/0:12,0:12:33.04:0,33,378	1/1:2,4:6:12.03:150,12,0	1/1:3,4:6:18.04:224,18,0	1/1:1,9:9:24.08:338,24,0	1/1:7,0:2:3.01:43,3,0
chr10	56427007	.	CA	C	1078.76	PASS	AB=0.774;AC=31;AF=0.554;AN=56;BaseQRankSum=0.923;DP=326;FS=4.362;HRun=16;HaplotypeScore=37.8872;InbreedingCoeff=0.2721;MQ=51.87;MQ0=29;MQRankSum=1.005;QD=4.23;ReadPosRankSum=2.861;VQSLOD=0.0684;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:27,3:28:38.69:39,0,126	1/1:0,2:2:2.91:18,3,0	0/0:21,0:7:8.62:0,9,61	0/1:24,0:7:7.19:7,0,17	0/0:7,0:7:6.46:0,6,52	0/1:6,4:10:4.01:42,0,4	1/1:3,5:8:8.73:54,9,0	0/1:14,15:26:5.82:167,0,6	0/0:2,1:2:0:0,0,0	0/0:10,0:10:3.84:0,4,56	0/0:8,0:8:8.95:0,9,69	0/0:3,0:3:0:0,0,0	0/0:4,0:3:3:0,3,25	0/0:8,0:8:14.95:0,15,118	1/1:2,5:6:8.81:54,9,0	0/0:4,1:4:0:0,0,0	1/1:18,17:34:43.08:257,43,0	1/1:5,0:14:11.07:47,11,0	0/1:9,1:7:13.08:31,0,13	1/1:0,5:5:11.77:72,12,0	0/1:5,4:10:8.24:61,0,8	1/1:3,1:2:5.87:35,6,0	1/1:4,1:5:2.86:18,3,0	1/1:6,8:14:17.44:107,17,0	0/1:3,4:8:8.39:61,0,8	1/1:5,5:9:14.52:89,15,0	1/1:9,2:11:5.69:35,6,0	1/1:9,0:4:9.96:48,10,0
chr10	56428425	.	A	AG	1229.32	PASS	AB=0.740;AC=22;AF=0.393;AN=56;BaseQRankSum=-0.240;DP=302;FS=35.563;HRun=9;HaplotypeScore=41.8625;InbreedingCoeff=0.6246;MQ=88.90;MQ0=3;MQRankSum=-0.484;QD=12.05;ReadPosRankSum=-1.960;VQSLOD=0.1415;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:50.99:0,51,442	0/0:2,0:2:3:0,3,26	0/0:30,0:22:14.80:0,15,186	0/0:14,0:10:3.36:0,3,17	0/0:4,0:4:12:0,12,104	0/0:5,0:5:9:0,9,78	0/0:16,0:16:33.87:0,34,288	0/0:5,0:5:2.97:0,3,26	1/1:0,5:5:6.02:66,6,0	1/1:4,2:6:6.02:66,6,0	1/1:2,7:9:15.04:165,15,0	0/0:14,0:14:35.96:0,36,306	0/0:10,0:10:20.98:0,21,182	0/1:8,1:10:10.14:10,0,139	1/1:0,10:10:24.06:265,24,0	0/0:11,0:11:29.97:0,30,258	0/0:22,0:22:27.96:0,28,416	0/0:11,0:11:32.99:0,33,284	1/1:1,4:5:14.82:123,15,0	1/1:4,5:9:8.98:86,9,0	1/1:13,5:17:0.12:116,0,0	0/0:9,0:9:17.79:0,18,143	0/0:5,0:5:12:0,12,104	0/0:22,0:23:58.67:0,59,498	0/1:2,6:8:7.81:118,0,8	1/1:2,3:5:6.02:66,6,0	1/1:2,11:13:1.54:240,2,0	1/1:1,3:4:4.96:93,5,0
chr10	56428959	.	G	GT	7647.61	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=8.459;DP=743;FS=4.537;HRun=8;HaplotypeScore=88.0046;InbreedingCoeff=0.9996;MQ=69.03;MQ0=0;MQRankSum=-0.523;QD=28.22;ReadPosRankSum=2.064;VQSLOD=5.1893;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,144,1318	0/0:11,0:11:33.02:0,33,302	0/0:28,0:24:51.27:0,51,410	0/0:24,0:24:47.50:0,48,381	0/0:26,0:26:63.02:0,63,577	0/0:19,0:19:51.03:0,51,467	0/0:30,0:30:78.01:0,78,709	0/0:33,0:33:59.99:0,60,545	1/1:3,30:33:84.25:969,84,0	1/1:3,23:26:69.20:795,69,0	1/1:4,20:24:57.17:658,57,0	0/0:35,0:35:83.99:0,84,759	0/0:18,0:18:48.02:0,48,439	0/0:29,0:29:81.04:0,81,741	1/1:2,23:25:63.19:727,63,0	0/0:31,0:31:81.04:0,81,741	0/0:38,0:38:99:0,111,1016	0/0:25,0:25:65.97:0,66,590	1/1:9,24:33:69.20:793,69,0	1/1:0,23:23:66.16:748,66,0	1/1:1,12:14:35.94:395,36,0	0/0:18,0:18:51.03:0,51,467	0/0:29,0:29:75.02:0,75,681	0/0:24,0:24:65.99:0,66,595	1/1:0,11:11:24.07:277,24,0	1/1:4,34:38:99:1177,102,0	1/1:4,25:29:66.20:762,66,0	1/1:3,11:14:30.09:346,30,0
chr10	56430458	.	TG	T	463.83	PASS	AB=0.657;AC=16;AF=0.333;AN=48;BaseQRankSum=-2.653;DP=116;FS=4.805;HRun=11;HaplotypeScore=24.3046;InbreedingCoeff=0.4144;MQ=92.70;MQ0=4;MQRankSum=-2.147;QD=10.54;ReadPosRankSum=2.355;VQSLOD=1.4679;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:18.04:0,18,188	./.	0/0:11,0:8:6.84:0,7,69	0/0:9,0:5:2.68:0,3,11	0/0:2,1:3:6.02:0,6,64	1/1:0,2:2:3:25,3,0	0/1:6,4:9:19.61:62,0,20	./.	0/0:2,0:2:5.36:0,5,21	0/0:2,0:2:5.42:0,5,22	0/0:2,0:2:5.34:0,5,22	1/1:0,1:1:3:25,3,0	0/0:2,0:2:3.01:0,3,32	0/0:2,0:2:2.97:0,3,20	0/0:3,0:3:8.04:0,8,32	1/1:0,3:3:8.99:74,9,0	1/1:1,7:8:20.97:172,21,0	0/1:3,5:9:11.80:109,0,12	0/0:5,0:5:8.10:0,8,51	./.	0/0:6,0:5:5.36:0,5,21	1/1:0,1:1:3:25,3,0	1/1:0,2:2:2.99:25,3,0	1/1:2,6:8:11.96:99,12,0	0/0:1,0:1:2.68:0,3,11	./.	0/0:5,0:5:8.28:0,8,38	0/0:4,0:3:8.36:0,8,53
chr10	56430459	.	G	GT	645.15	PASS	AB=0.756;AC=19;AF=0.365;AN=52;BaseQRankSum=-4.975;DP=118;FS=0.000;HRun=1;HaplotypeScore=23.6099;InbreedingCoeff=0.4334;MQ=92.24;MQ0=4;MQRankSum=0.815;QD=15.00;ReadPosRankSum=-0.413;VQSLOD=2.7200;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:21.06:0,21,276	./.	0/0:11,0:8:21.97:0,22,162	0/1:9,0:5:3.66:4,0,20	0/0:3,0:3:8.95:0,9,84	0/0:4,0:4:2.92:0,3,17	0/0:10,0:9:17.27:0,17,106	0/0:1,0:1:2.98:0,3,21	1/1:0,2:2:6.02:82,6,0	1/1:0,2:2:6.02:80,6,0	1/1:0,2:2:6.02:79,6,0	0/0:1,0:1:2.90:0,3,16	0/0:1,0:1:3.01:0,3,42	0/0:2,0:2:2.97:0,3,20	1/1:0,3:3:9.03:121,9,0	0/0:3,0:3:8.53:0,9,44	0/0:8,0:8:20.38:0,20,115	0/0:9,0:9:23.39:0,23,141	0/1:2,4:6:16.47:117,0,16	./.	1/1:2,5:6:5.99:82,6,0	0/0:1,0:1:2.92:0,3,17	0/0:2,0:2:2.92:0,3,17	0/0:8,0:8:14.55:0,15,84	1/1:0,1:1:3.01:40,3,0	1/1:2,0:2:2.99:24,3,0	1/1:3,2:5:8.41:105,8,0	0/1:2,2:3:11.43:73,0,11
chr10	56430865	.	AG	A	1630.54	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=4.670;DP=376;FS=0.000;HRun=2;HaplotypeScore=58.5295;InbreedingCoeff=0.8477;MQ=60.92;MQ0=30;MQRankSum=1.957;QD=10.32;ReadPosRankSum=0.663;VQSLOD=1.3641;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:63.10:0,63,910	0/0:4,0:3:6.02:0,6,79	0/0:46,0:11:23.81:0,24,294	0/1:76,0:16:4.37:4,0,314	0/0:10,0:10:22.78:0,23,315	1/1:2,12:12:26.85:277,27,0	1/1:2,9:7:15.05:195,15,0	0/0:22,0:22:66.21:0,66,875	0/0:6,0:6:18.06:0,18,270	0/0:7,0:6:18.06:0,18,264	0/0:5,0:5:11.07:0,11,140	1/1:0,4:4:12.04:156,12,0	0/0:8,0:8:21.05:0,21,314	0/0:10,0:10:24.08:0,24,354	0/0:6,0:6:12.04:0,12,174	1/1:0,7:7:17.63:175,18,0	1/1:0,14:14:39.12:486,39,0	1/1:3,5:7:14.91:171,15,0	0/0:9,0:9:21.07:0,21,294	0/0:4,0:4:9.03:0,9,129	0/0:10,0:10:18.06:0,18,263	1/1:0,3:3:8.49:63,8,0	1/1:0,3:2:3.01:39,3,0	1/1:4,14:18:21.03:267,21,0	0/0:5,0:5:14.64:0,15,190	0/0:15,0:15:42.11:0,42,602	0/0:15,0:15:45.15:0,45,674	0/0:9,0:9:20.66:0,21,309
chr10	56432089	.	TTTC	T	1643.44	PASS	AB=0.952;AC=19;AF=0.339;AN=56;BaseQRankSum=-1.258;DP=494;FS=7.585;HRun=0;HaplotypeScore=92.2090;InbreedingCoeff=0.6181;MQ=57.47;MQ0=15;MQRankSum=-4.992;QD=8.79;ReadPosRankSum=-4.051;VQSLOD=1.0801;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:34,1:34:4.08:4,0,558	0/0:10,0:9:27.03:0,27,319	0/0:30,0:10:2.67:0,3,99	0/0:23,0:11:14:0,14,100	0/1:19,0:19:29.49:29,0,255	1/1:8,1:9:8.82:141,9,0	1/1:16,2:18:22.58:289,23,0	0/0:30,0:28:67.79:0,68,566	0/0:12,0:12:3.65:0,4,133	0/0:16,0:16:4.52:0,5,336	0/0:21,0:20:31.12:0,31,455	1/1:11,1:12:22.16:215,22,0	0/0:12,0:12:22.27:0,22,290	0/0:11,0:11:24.31:0,24,339	0/0:19,0:18:38.42:0,38,385	1/1:9,0:9:26.79:199,27,0	1/1:28,2:28:3.15:400,3,0	1/1:15,1:15:10.67:162,11,0	0/0:25,0:22:29.96:0,30,528	0/0:24,0:24:23.61:0,24,362	0/0:10,0:8:3.13:0,3,102	1/1:7,0:6:14.81:109,15,0	0/1:13,2:15:14.45:220,0,14	1/1:17,0:16:9.56:66,10,0	0/0:19,0:19:31.58:0,32,370	0/0:20,0:20:8.13:0,8,485	0/0:17,0:17:12.32:0,12,353	0/0:8,0:7:15.01:0,15,188
chr10	56432090	.	TTC	T	2162.24	PASS	AB=1.000;AC=24;AF=0.429;AN=56;BaseQRankSum=-1.299;DP=492;FS=20.640;HRun=0;HaplotypeScore=83.0238;InbreedingCoeff=0.5481;MQ=56.25;MQ0=16;MQRankSum=-5.509;QD=8.86;ReadPosRankSum=-5.912;VQSLOD=0.5816;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:34,0:33:39.63:40,0,393	0/0:10,0:9:26.59:0,27,237	0/0:30,0:10:1.30:0,1,97	0/0:22,0:10:13.78:0,14,96	0/1:19,0:19:31.57:32,0,194	1/1:9,0:9:24.89:189,25,0	1/1:16,2:18:34.45:345,34,0	0/0:30,0:28:52.68:0,53,400	0/1:12,0:12:9.54:10,0,105	0/1:16,0:16:0.43:0,0,217	0/0:21,0:20:14.26:0,14,301	1/1:11,1:12:27.35:210,27,0	0/0:12,0:12:8.82:0,9,192	0/0:11,0:11:14.39:0,14,234	0/0:20,0:18:28.51:0,29,256	1/1:8,1:9:27:282,27,0	1/1:28,2:28:28.85:509,29,0	1/1:16,0:15:33.20:219,33,0	0/0:25,0:22:19.43:0,19,378	0/0:23,0:23:7.15:0,7,241	0/1:10,0:8:2.39:2,0,88	1/1:7,0:6:14.95:128,15,0	1/1:12,3:15:14.81:252,15,0	1/1:15,2:16:11.47:121,11,0	0/0:19,0:19:29.24:0,29,287	0/1:20,0:20:22.72:23,0,345	0/0:17,0:17:7.97:0,8,262	0/0:8,0:7:14.98:0,15,145
chr10	56432117	.	C	CT	1070.95	PASS	AB=0.912;AC=19;AF=0.365;AN=52;BaseQRankSum=2.754;DP=475;FS=5.087;HRun=11;HaplotypeScore=83.8633;InbreedingCoeff=0.4779;MQ=33.58;MQ0=53;MQRankSum=-0.636;QD=5.28;ReadPosRankSum=0.292;VQSLOD=1.9366;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:30:20.39:0,20,239	0/0:10,0:9:8.66:0,9,64	./.	./.	0/0:23,0:22:20.74:0,21,159	0/1:11,4:15:8.92:122,0,9	1/1:12,7:16:25.32:225,25,0	0/0:16,0:15:17.85:0,18,138	0/0:17,0:16:8.55:0,9,69	0/0:20,0:18:19.31:0,19,133	0/0:17,0:17:16.72:0,17,122	1/1:5,5:11:17.62:159,18,0	0/0:14,0:14:14.71:0,15,116	0/0:17,0:15:0.06:0,0,134	0/0:17,0:14:7.83:0,8,87	1/1:8,5:11:15.44:142,15,0	0/1:26,6:26:11.51:170,0,12	1/1:13,3:11:7.26:63,7,0	0/0:18,0:15:23.23:0,23,176	0/1:23,0:22:2.57:3,0,96	0/0:10,0:6:5.94:0,6,46	1/1:8,6:13:1.22:177,1,0	1/1:14,6:20:14.16:127,14,0	1/1:15,1:12:3.01:31,3,0	0/1:10,1:10:17.23:22,0,17	0/0:19,0:16:17.62:0,18,134	0/0:21,0:18:15.02:0,15,149	0/1:12,0:11:1.19:1,0,18
chr10	56432929	.	AACAC	A	1159.53	PASS	AB=0.783;AC=20;AF=0.385;AN=52;BaseQRankSum=4.008;DP=512;FS=0.756;HRun=0;HaplotypeScore=92.8745;InbreedingCoeff=0.5246;MQ=72.94;MQ0=6;MQRankSum=-1.661;QD=5.80;ReadPosRankSum=0.930;VQSLOD=1.3103;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:15.02:0,15,303	0/0:7,0:10:5.62:0,6,119	./.	0/0:40,0:25:3.01:0,3,39	0/0:9,0:11:8.77:0,9,154	0/0:16,0:18:20.79:0,21,361	0/0:28,0:30:1.91:0,2,544	0/0:25,0:25:10.85:0,11,172	1/1:12,7:20:8.61:121,9,0	1/1:11,3:14:12.03:168,12,0	./.	0/0:13,0:14:30.10:0,30,636	0/0:11,0:11:15.52:0,16,293	0/1:11,1:14:28.88:29,0,246	1/1:16,4:23:15.04:196,15,0	0/0:25,0:29:35.86:0,36,746	0/1:15,1:17:19.88:20,0,444	0/0:13,0:16:20.54:0,21,378	1/1:11,3:14:9.03:140,9,0	1/1:21,1:24:6:75,6,0	0/1:19,6:25:10:65,0,10	0/0:16,0:16:9.03:0,9,212	0/0:9,0:9:12.04:0,12,283	0/0:27,0:30:23.82:0,24,447	0/1:4,3:9:3.47:85,0,3	1/1:17,6:23:10.75:185,11,0	1/1:8,3:11:15.04:215,15,0	1/1:3,0:3:3.01:43,3,0
chr10	56433869	.	AAAG	A	1001.19	PASS	AB=0.966;AC=22;AF=0.393;AN=56;BaseQRankSum=3.449;DP=389;FS=2.199;HRun=0;HaplotypeScore=61.0301;InbreedingCoeff=-0.5025;MQ=45.23;MQ0=27;MQRankSum=-1.217;QD=3.05;ReadPosRankSum=4.631;VQSLOD=1.3106;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:28,1:25:29.90:30,0,172	0/1:2,0:2:3.22:3,0,8	0/0:12,0:4:7.88:0,8,44	0/1:22,0:9:3.34:11,0,3	0/1:20,0:19:48.62:49,0,157	0/1:12,0:12:54.67:55,0,61	0/1:11,1:10:22.88:51,0,23	0/1:15,0:14:10.96:11,0,139	0/1:5,1:6:13.72:25,0,14	0/1:15,0:15:32.96:33,0,106	0/0:16,0:15:0.01:0,0,79	0/0:6,0:5:4.12:0,4,50	0/0:3,0:3:2.99:0,3,24	0/0:11,0:10:4.23:0,4,15	0/1:13,0:12:67.30:77,0,67	0/1:11,1:11:17.27:17,0,46	1/1:21,1:19:9.76:129,10,0	0/1:21,2:21:22.87:187,0,23	0/0:11,0:10:20.89:0,21,186	0/1:14,1:14:26.66:27,0,78	0/0:2,0:1:2.99:0,3,24	0/1:7,0:5:15.11:15,0,30	0/1:10,0:10:6.97:61,0,7	0/1:20,0:16:55.40:55,0,85	0/1:13,3:15:32.44:76,0,32	0/1:20,0:16:12.76:13,0,68	0/1:15,1:15:6.52:142,0,7	0/1:21,0:17:40.80:84,0,41
chr10	56433870	.	AAG	A	1102.69	PASS	AB=0.949;AC=25;AF=0.446;AN=56;BaseQRankSum=4.402;DP=383;FS=0.475;HRun=0;HaplotypeScore=53.7048;InbreedingCoeff=-0.4828;MQ=45.45;MQ0=26;MQRankSum=1.009;QD=3.24;ReadPosRankSum=6.930;VQSLOD=1.1290;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:27,1:24:55.34:55,0,79	0/1:2,0:2:3.26:3,0,8	0/0:13,0:4:5.85:0,6,26	0/1:22,0:9:4.02:10,0,4	0/1:21,0:19:45.24:45,0,105	0/1:11,1:12:26.87:107,0,27	0/1:12,1:11:43.06:47,0,43	0/1:15,0:14:11.39:11,0,138	0/1:3,3:6:11.31:11,0,14	0/1:15,0:15:10.46:10,0,105	0/0:14,1:14:3.24:0,3,72	0/1:5,0:4:5.33:5,0,25	0/0:2,0:2:2.99:0,3,24	1/1:11,0:10:3.46:9,3,0	0/1:13,0:12:50.95:88,0,51	0/1:5,6:10:21.25:25,0,21	1/1:19,4:20:26.29:196,26,0	0/1:21,2:21:10.89:211,0,11	0/0:11,0:10:20.84:0,21,180	0/1:15,0:14:5.61:6,0,83	0/0:2,0:1:2.99:0,3,24	0/1:6,1:5:20.50:20,0,30	0/1:9,0:9:5.91:65,0,6	0/1:17,0:15:34.11:73,0,34	0/1:16,0:15:27.98:68,0,28	0/1:20,0:16:17.34:17,0,67	0/1:17,0:16:7.72:90,0,8	0/1:19,0:15:40.04:78,0,40
chr10	56433871	.	AG	A	969.16	PASS	AB=0.952;AC=23;AF=0.411;AN=56;BaseQRankSum=4.621;DP=378;FS=2.236;HRun=1;HaplotypeScore=50.0113;InbreedingCoeff=-0.3373;MQ=45.69;MQ0=23;MQRankSum=2.144;QD=3.20;ReadPosRankSum=7.388;VQSLOD=-0.3005;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:24,3:23:27.06:96,0,27	0/1:2,0:2:3.26:3,0,8	0/0:14,0:5:6.05:0,6,52	0/1:20,1:9:3.09:11,0,3	0/1:18,1:18:65.02:73,0,65	0/1:8,3:12:19.21:74,0,19	0/1:13,0:11:38.23:38,0,47	0/1:12,0:14:13.89:14,0,130	0/1:6,0:6:4.84:5,0,14	0/0:15,0:15:13.61:0,14,135	0/0:14,0:14:7.48:0,7,78	0/1:5,0:4:15.42:15,0,25	0/0:3,0:3:2.98:0,3,24	1/1:3,8:10:5.57:31,6,0	0/1:13,0:12:51.18:77,0,51	0/1:10,1:10:16.16:16,0,17	1/1:22,0:20:23.21:152,23,0	0/1:21,0:20:3.74:168,0,4	0/0:11,0:10:20.84:0,21,172	0/0:14,0:13:1.88:0,2,91	0/0:3,0:1:2.99:0,3,24	0/1:7,0:5:7.56:8,0,30	0/1:8,1:9:6.59:57,0,7	0/1:17,0:15:7.27:91,0,7	0/1:14,0:14:29.12:55,0,29	0/1:19,0:16:4.46:4,0,74	0/1:17,0:16:10.91:60,0,11	0/1:19,0:15:40.25:72,0,40
chr10	56436498	.	GCACA	G	6510.51	PASS	AB=0.794;AC=23;AF=0.411;AN=56;BaseQRankSum=0.549;DP=704;FS=6.061;HRun=0;HaplotypeScore=155.6501;InbreedingCoeff=0.8936;MQ=53.59;MQ0=8;MQRankSum=3.651;QD=21.85;ReadPosRankSum=5.353;VQSLOD=3.9731;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,1:39:28.09:0,28,1386	0/0:8,0:10:6.02:0,6,105	0/0:21,0:9:9:0,9,154	0/0:23,0:7:3.01:0,3,40	0/0:27,0:27:51.17:0,51,1175	0/0:10,0:26:18.45:0,18,252	0/0:21,0:33:24.05:0,24,426	0/0:27,0:27:45.15:0,45,686	1/1:10,19:29:42.59:685,43,0	1/1:11,6:16:18.06:290,18,0	1/1:2,10:14:30.09:446,30,0	0/0:13,0:32:32.77:0,33,532	0/0:25,0:28:65.94:0,66,1450	0/1:19,1:27:1.83:2,0,675	1/1:14,19:34:48.15:760,48,0	0/0:11,0:22:23.50:0,23,351	0/0:14,0:31:27.02:0,27,415	0/0:19,0:29:40.76:0,41,678	1/1:9,7:13:15.11:279,15,0	1/1:4,8:14:20.85:300,21,0	1/1:21,34:55:87.16:1415,87,0	0/0:7,0:14:11.95:0,12,196	0/0:14,0:14:14.82:0,15,230	0/0:16,0:29:17.81:0,18,282	1/1:7,12:19:30.10:488,30,0	1/1:17,18:36:41.42:809,41,0	1/1:7,16:24:45.14:711,45,0	1/1:6,7:13:21.07:328,21,0
chr10	56436853	.	C	CTTT	1989.18	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=4.166;DP=408;FS=0.545;HRun=14;HaplotypeScore=74.9334;InbreedingCoeff=0.7723;MQ=64.61;MQ0=3;MQRankSum=-1.636;QD=13.17;ReadPosRankSum=-2.008;VQSLOD=1.1047;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:31:56.76:0,57,594	1/1:0,5:5:15.05:261,15,0	0/0:16,0:11:5.58:0,6,51	0/0:12,0:6:2.87:0,3,28	0/1:10,0:10:4.48:4,0,108	1/1:5,3:19:35.91:357,36,0	1/1:3,0:13:7.22:48,7,0	1/1:15,4:20:2.47:272,2,0	0/0:15,0:15:28.39:0,28,305	0/0:14,0:16:19.32:0,19,213	0/0:20,0:20:38.68:0,39,400	1/1:7,0:8:7.21:61,7,0	0/0:14,0:14:17.37:0,17,174	0/0:10,0:12:11.65:0,12,110	0/0:15,0:15:17.80:0,18,178	1/1:7,8:16:30.04:433,30,0	1/1:8,1:22:33.59:272,34,0	1/1:6,3:21:38.06:351,38,0	0/0:21,0:21:19.89:0,20,248	0/0:7,0:9:6.07:0,6,87	0/0:11,0:11:20.88:0,21,215	1/1:3,0:4:4.23:25,4,0	1/1:1,0:5:4.23:25,4,0	1/1:3,0:5:11.70:80,12,0	0/0:12,0:12:26.78:0,27,254	0/0:15,0:15:29.84:0,30,297	0/0:18,0:18:23.33:0,23,235	0/0:17,0:18:9.15:0,9,280
chr10	56437966	.	T	TAAAAAAAAAAA	9268.76	PASS	AB=0.933;AC=45;AF=0.833;AN=54;BaseQRankSum=-0.684;DP=323;FS=0.000;HRun=19;HaplotypeScore=111.2980;InbreedingCoeff=0.2788;MQ=57.27;MQ0=26;MQRankSum=-4.406;QD=34.71;ReadPosRankSum=-2.649;VQSLOD=-0.2215;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:22:3.29:0,3,294	1/1:3,0:2:3.01:38,3,0	0/1:16,0:5:26.43:26,0,94	0/0:27,0:9:10.35:0,10,113	0/1:8,0:8:0:1,0,0	1/1:11,0:11:12.04:360,12,0	1/1:10,0:7:8.95:241,9,0	1/1:17,0:14:14.95:473,15,0	1/1:13,0:12:18.06:745,18,0	1/1:10,0:9:18.06:743,18,0	1/1:5,0:5:3.01:118,3,0	1/1:11,0:11:3.01:58,3,0	0/1:9,0:9:0:1,0,0	0/1:9,0:10:14.43:14,0,143	1/1:11,0:9:12.04:527,12,0	1/1:11,1:13:21.07:925,21,0	1/1:17,0:17:36.07:1215,36,0	0/1:7,6:14:80.02:544,0,80	1/1:12,0:8:9.03:311,9,0	1/1:3,0:3:1.25:3,1,0	1/1:9,0:8:17.09:475,17,0	./.	1/1:4,0:4:10.46:203,10,0	1/1:10,0:10:6:162,6,0	1/1:3,0:3:3.01:145,3,0	1/1:20,0:18:28.84:783,29,0	1/1:15,0:15:18.06:699,18,0	1/1:9,1:5:12.04:459,12,0
chr10	56438376	.	TA	T	2246.51	PASS	AB=0.760;AC=23;AF=0.411;AN=56;BaseQRankSum=6.588;DP=425;FS=2.161;HRun=13;HaplotypeScore=56.8810;InbreedingCoeff=0.6087;MQ=65.46;MQ0=0;MQRankSum=-0.484;QD=9.85;ReadPosRankSum=1.630;VQSLOD=3.0137;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,17:21:15.39:276,15,0	0/0:11,1:12:5.10:0,5,201	0/1:17,0:10:8.45:8,0,67	0/0:8,0:3:5.99:0,6,47	0/0:29,1:30:24.46:0,24,365	0/0:12,0:13:35.89:0,36,335	0/1:14,2:16:4.85:5,0,263	0/0:28,0:27:45.54:0,46,434	1/1:5,11:16:23.77:175,24,0	1/1:7,12:19:12.57:255,13,0	0/1:6,9:15:2.80:148,0,3	0/0:5,0:5:6.01:0,6,58	0/0:9,0:9:24.03:0,24,229	0/0:10,1:13:5.44:0,5,197	1/1:7,8:15:29.72:218,30,0	0/0:8,0:9:23.83:0,24,209	0/0:15,0:15:33.01:0,33,304	0/0:15,1:16:33.03:0,33,314	1/1:6,10:16:32.62:242,33,0	0/1:6,5:11:6.92:91,0,7	1/1:1,9:10:17.90:131,18,0	0/0:9,1:11:4.95:0,5,187	0/0:14,0:14:20.50:0,20,228	0/0:14,0:14:30.05:0,30,292	1/1:6,9:15:23.82:174,24,0	1/1:8,16:24:15.48:277,15,0	0/1:4,8:12:34.16:107,0,34	1/1:3,16:21:48.25:339,48,0
chr10	56439007	.	TTTTG	T	2439.73	PASS	AB=1.000;AC=39;AF=0.722;AN=54;BaseQRankSum=-6.153;DP=400;FS=3.055;HRun=0;HaplotypeScore=47.4976;InbreedingCoeff=0.4269;MQ=60.39;MQ0=34;MQRankSum=-0.615;QD=10.89;ReadPosRankSum=-2.492;VQSLOD=1.6777;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:16:14.21:0,14,454	1/1:3,0:3:3.22:52,3,0	0/0:71,0:17:14.74:0,15,153	0/0:57,0:12:8.53:0,9,62	0/0:19,0:17:12.12:0,12,368	0/1:10,0:10:14.55:18,0,15	1/1:12,0:11:28.42:197,28,0	1/1:19,0:19:26.29:188,26,0	./.	1/1:16,0:14:41.85:365,42,0	1/1:0,8:8:17.77:117,18,0	1/1:7,1:8:5.34:28,5,0	0/1:5,0:5:5.84:6,0,123	0/0:6,0:6:3.01:0,3,53	1/1:6,0:4:7.77:51,8,0	1/1:8,1:9:4.12:56,4,0	1/1:20,0:20:38.37:289,38,0	0/1:21,0:20:57.91:81,0,58	1/1:3,11:11:29.99:291,30,0	1/1:8,0:8:17.77:144,18,0	1/1:1,0:1:3:27,3,0	0/1:2,0:2:10.90:21,0,11	0/1:3,0:3:0:0,0,0	1/1:7,0:7:12.91:110,13,0	1/1:6,0:6:11.98:102,12,0	1/1:16,0:16:42.49:353,42,0	1/1:3,9:9:5.95:61,6,0	1/1:1,17:17:3.01:48,3,0
chr10	56439008	.	TTTG	T	2741.82	PASS	AB=0.877;AC=42;AF=0.778;AN=54;BaseQRankSum=-5.452;DP=401;FS=4.351;HRun=0;HaplotypeScore=43.0000;InbreedingCoeff=0.4490;MQ=60.41;MQ0=34;MQRankSum=-1.531;QD=11.19;ReadPosRankSum=-2.513;VQSLOD=2.3382;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:16:3.89:0,4,341	1/1:3,0:3:8.47:66,8,0	0/0:70,0:17:13.92:0,14,142	0/0:56,0:12:6.64:0,7,53	0/1:20,0:18:8.79:9,0,233	0/1:9,1:10:1.53:31,0,2	1/1:12,0:11:29.84:234,30,0	1/1:20,0:20:29.77:227,30,0	./.	1/1:17,0:15:44.87:386,45,0	1/1:8,0:8:17.77:117,18,0	1/1:8,0:8:5.95:42,6,0	0/1:5,0:5:6.10:6,0,100	0/0:6,0:6:3.01:0,3,40	1/1:6,0:4:7.77:51,8,0	1/1:9,0:9:14.08:86,14,0	1/1:18,2:20:38.58:294,39,0	1/1:21,0:20:15.06:197,15,0	1/1:14,0:11:29.98:269,30,0	1/1:7,0:7:17.81:136,18,0	1/1:1,0:1:3:27,3,0	1/1:2,0:2:0.62:23,1,0	0/1:1,2:3:0:0,0,0	1/1:7,0:7:13.78:130,14,0	1/1:6,0:6:11.98:103,12,0	1/1:16,0:16:43.14:360,43,0	1/1:12,0:9:5.98:58,6,0	1/1:18,0:17:3.01:36,3,0
chr10	56439009	.	TTG	T	3002.16	PASS	AB=1.000;AC=44;AF=0.815;AN=54;BaseQRankSum=-5.099;DP=397;FS=2.422;HRun=0;HaplotypeScore=38.0597;InbreedingCoeff=0.3774;MQ=60.61;MQ0=34;MQRankSum=-1.824;QD=11.50;ReadPosRankSum=-1.966;VQSLOD=2.4245;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:18,0:16:13.54:14,0,257	1/1:3,0:3:9.02:96,9,0	0/0:69,0:17:12.65:0,13,139	0/0:56,0:12:5.09:0,5,47	0/1:20,0:18:34.26:34,0,154	1/1:3,7:10:7.52:62,8,0	1/1:12,0:11:29.86:235,30,0	1/1:18,1:19:29.78:227,30,0	./.	1/1:18,0:16:47.87:404,48,0	1/1:8,0:8:17.77:117,18,0	1/1:1,7:8:5.98:58,6,0	0/1:5,0:5:6.88:7,0,78	0/0:6,0:6:3:0,3,27	1/1:6,0:4:7.20:49,7,0	1/1:8,0:8:14.81:107,15,0	1/1:20,0:20:38.76:295,39,0	1/1:19,1:19:42.03:325,42,0	1/1:14,0:11:29.97:255,30,0	1/1:7,0:7:17.80:131,18,0	1/1:1,0:1:3:27,3,0	1/1:2,0:2:5.50:36,5,0	0/1:3,0:3:0:0,0,0	1/1:7,0:7:14.46:131,14,0	1/1:6,0:6:11.98:103,12,0	1/1:16,0:16:43.15:357,43,0	1/1:12,0:9:5.97:48,6,0	1/1:18,0:17:3:29,3,0
chr10	56439010	.	TG	T	3047.03	PASS	AB=0.983;AC=44;AF=0.846;AN=52;BaseQRankSum=-4.395;DP=392;FS=1.646;HRun=1;HaplotypeScore=33.2888;InbreedingCoeff=0.2835;MQ=60.67;MQ0=34;MQRankSum=-1.995;QD=9.83;ReadPosRankSum=-0.884;VQSLOD=0.9396;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:18,0:16:18.25:18,0,177	1/1:3,0:3:8.99:78,9,0	0/0:67,2:17:12.58:0,13,139	0/1:51,4:11:0.75:1,0,36	0/1:20,0:18:56.27:56,0,91	1/1:9,0:9:5.97:47,6,0	1/1:12,0:11:29.84:235,30,0	1/1:17,0:17:29.78:227,30,0	./.	1/1:18,0:16:47.84:396,48,0	1/1:8,0:8:17.77:117,18,0	1/1:8,0:8:5.97:46,6,0	0/1:5,0:5:16.07:16,0,60	0/0:1,5:6:2.88:0,3,15	1/1:6,0:4:8.18:53,8,0	1/1:8,0:8:14.87:110,15,0	1/1:20,0:20:38.76:295,39,0	1/1:19,1:19:50.54:385,51,0	1/1:14,0:11:29.94:246,30,0	1/1:7,0:7:17.81:128,18,0	1/1:1,0:1:3:27,3,0	1/1:2,0:2:6:53,6,0	./.	1/1:7,0:7:14.46:132,14,0	1/1:6,0:6:11.98:103,12,0	1/1:16,0:16:43.14:354,43,0	1/1:12,0:9:5.95:42,6,0	1/1:18,0:17:2.99:23,3,0
chr10	56442711	.	TA	T	2665.96	PASS	AB=0.647;AC=47;AF=0.870;AN=54;BaseQRankSum=0.860;DP=367;FS=4.209;HRun=14;HaplotypeScore=46.0744;InbreedingCoeff=0.0771;MQ=59.81;MQ0=7;MQRankSum=0.077;QD=7.53;ReadPosRankSum=3.761;VQSLOD=2.2693;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,17:22:39.10:268,39,0	1/1:0,5:5:8.93:62,9,0	1/1:11,1:2:2.96:21,3,0	0/0:11,0:7:3.95:0,4,29	1/1:3,11:14:26.52:178,27,0	1/1:2,0:17:22.40:65,22,0	1/1:1,0:12:20.36:59,20,0	0/1:9,9:17:12.97:132,0,13	1/1:2,7:8:11.85:82,12,0	1/1:6,10:16:24.67:198,25,0	0/1:8,8:16:21.08:117,0,21	1/1:1,0:10:12.22:35,12,0	1/1:3,4:9:10.91:67,11,0	0/1:5,7:11:4.93:106,0,5	1/1:3,7:9:14.86:103,15,0	1/1:1,0:12:22.86:68,23,0	1/1:6,0:29:36.64:106,37,0	1/1:5,0:19:34.40:99,34,0	0/1:6,11:17:24.18:126,0,24	0/1:5,4:9:2.11:74,0,2	1/1:2,2:5:7.96:47,8,0	./.	1/1:0,0:4:4.06:12,4,0	1/1:1,0:4:4.07:12,4,0	1/1:7,11:18:32.76:242,33,0	1/1:2,11:13:30.16:203,30,0	1/1:8,13:20:23.76:164,24,0	1/1:7,9:16:8.06:146,8,0
chr10	56443254	.	C	CA	17989.39	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-11.076;DP=613;FS=8.020;HRun=0;HaplotypeScore=52.8551;InbreedingCoeff=0.9912;MQ=60.15;MQ0=3;MQRankSum=-1.181;QD=38.44;ReadPosRankSum=4.895;VQSLOD=4.7393;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:45:99:0,107,1809	1/1:0,10:10:30.10:466,30,0	0/0:19,0:18:51.15:0,51,676	0/0:27,0:25:69.18:0,69,904	0/0:20,0:20:60.20:0,60,839	1/1:0,27:25:63.21:1006,63,0	1/1:0,17:16:39.13:623,39,0	1/1:1,29:24:69.23:1100,69,0	1/1:0,19:18:42.14:669,42,0	1/1:0,21:19:54.13:810,54,0	1/1:0,6:6:18.06:282,18,0	1/1:0,15:14:30.10:479,30,0	0/0:18,0:18:51.13:0,51,662	0/0:16,0:16:45.14:0,45,613	1/1:0,39:36:99:1581,99,0	1/1:0,26:24:60.20:958,60,0	1/1:0,40:39:99:1629,102,0	1/1:0,23:22:60.20:959,60,0	1/1:0,19:13:39.13:622,39,0	1/1:0,14:13:30.10:479,30,0	1/1:0,49:47:99:1964,123,0	1/1:0,10:10:24.08:384,24,0	1/1:0,7:6:12.04:192,12,0	1/1:1,19:20:51.17:814,51,0	1/1:0,17:16:39.13:623,39,0	1/1:0,19:17:51.17:815,51,0	1/1:0,30:27:69.24:1101,69,0	1/1:0,9:9:27.09:431,27,0
chr10	56443626	.	AT	A	3811.56	PASS	AC=22;AF=0.478;AN=46;BaseQRankSum=4.933;DP=312;FS=1.787;HRun=8;HaplotypeScore=35.8656;InbreedingCoeff=0.7921;MQ=67.76;MQ0=2;MQRankSum=0.638;QD=23.97;ReadPosRankSum=0.854;VQSLOD=3.8736;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:81.25:0,81,977	0/0:7,0:7:2.41:0,2,13	0/0:12,0:7:5.92:0,6,43	0/0:9,0:7:14.87:0,15,121	0/0:25,0:25:72.22:0,72,869	0/0:7,0:7:0:0,0,0	./.	0/0:11,0:11:0:0,0,0	1/1:1,10:11:24.04:232,24,0	1/1:1,14:15:42.07:405,42,0	1/1:1,14:15:42.06:404,42,0	0/0:6,0:6:3.01:0,3,36	0/0:9,0:9:15.05:0,15,181	0/0:9,0:9:27.08:0,27,323	1/1:0,10:11:29.08:267,29,0	./.	0/0:7,0:7:0:0,0,0	0/0:7,0:7:2.99:0,3,24	1/1:4,23:27:66.09:634,66,0	1/1:2,11:13:30.04:290,30,0	1/1:1,7:8:15.02:145,15,0	./.	./.	./.	1/1:1,9:10:18.03:174,18,0	1/1:1,23:24:66.07:625,66,0	1/1:0,15:15:39.01:377,39,0	1/1:1,9:10:27.04:261,27,0
chr10	56443830	.	G	GTT	2192.29	PASS	AB=0.842;AC=26;AF=0.464;AN=56;BaseQRankSum=-0.230;DP=542;FS=8.864;HRun=16;HaplotypeScore=81.0358;InbreedingCoeff=0.4645;MQ=71.51;MQ0=5;MQRankSum=-0.784;QD=6.89;ReadPosRankSum=0.966;VQSLOD=0.0629;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:41:50.20:0,50,402	1/1:2,1:5:10.71:73,11,0	0/0:44,0:17:21.72:0,22,140	0/1:35,0:19:7.81:30,0,8	0/1:18,0:24:2.30:2,0,145	1/1:20,5:30:47.84:382,48,0	1/1:3,12:19:29.39:303,29,0	1/1:18,1:24:28.24:185,28,0	0/0:11,0:17:6.54:0,7,127	0/1:9,0:9:14.21:14,0,35	0/0:11,0:16:18.56:0,19,111	0/1:6,2:15:3.91:88,0,4	0/0:10,0:12:3.63:0,4,134	0/1:9,1:11:19.29:19,0,83	0/0:13,0:16:20.64:0,21,189	1/1:7,5:21:25.16:237,25,0	1/1:8,14:30:7.50:233,7,0	1/1:12,3:19:26.21:241,26,0	0/0:23,0:26:28.10:0,28,216	0/0:11,0:12:5.21:0,5,91	0/1:11,0:16:0.74:1,0,121	1/1:3,0:3:6.02:72,6,0	1/1:2,12:13:17.94:184,18,0	0/1:11,14:27:6.37:315,0,6	0/1:9,0:13:0.49:0,0,73	0/0:19,0:20:29.08:0,29,208	0/0:12,0:15:20.93:0,21,190	0/0:5,0:5:5.76:0,6,45
chr10	56446516	.	AT	A	7498.73	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=10.797;DP=665;FS=0.657;HRun=1;HaplotypeScore=91.9336;InbreedingCoeff=0.9837;MQ=70.86;MQ0=0;MQRankSum=-0.856;QD=37.87;ReadPosRankSum=2.719;VQSLOD=5.3040;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,120,1841	0/0:17,0:16:42.14:0,42,670	0/0:11,0:11:28.21:0,28,475	0/0:7,0:7:6.31:0,6,134	0/0:18,0:18:48.16:0,48,767	1/1:0,33:33:93.31:1301,93,0	1/1:0,24:24:57.19:797,57,0	0/0:24,0:24:51.17:0,51,794	0/0:30,0:30:90.31:0,90,1439	0/0:31,0:31:93.32:0,93,1487	0/0:19,0:19:51.17:0,51,815	1/1:0,24:24:72.24:1006,72,0	0/0:29,0:29:87.30:0,87,1387	0/0:26,0:26:78.27:0,78,1244	0/0:36,0:36:99:0,108,1717	1/1:1,30:31:39.33:1127,39,0	1/1:0,34:34:93.31:1300,93,0	1/1:0,12:12:33.11:461,33,0	0/0:21,0:21:63.21:0,63,1007	0/0:14,0:14:42.14:0,42,671	0/0:28,0:28:84.29:0,84,1343	1/1:0,17:17:48.16:668,48,0	1/1:0,14:14:39.13:545,39,0	1/1:0,9:9:21.07:294,21,0	0/0:25,0:25:60.20:0,60,958	0/0:32,0:32:87.30:0,87,1390	0/0:37,0:37:99:0,111,1766	0/0:22,0:21:63.18:0,63,959
chr10	56446826	.	T	TTGTGTGTG	2399.76	PASS	AB=1.000;AC=26;AF=0.481;AN=54;BaseQRankSum=6.490;DP=427;FS=15.592;HRun=0;HaplotypeScore=124.4934;InbreedingCoeff=0.1723;MQ=69.65;MQ0=8;MQRankSum=-5.430;QD=10.76;ReadPosRankSum=-1.794;VQSLOD=0.8005;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:51:99:0,108,2334	0/1:9,0:9:46.78:47,0,135	0/0:20,0:14:41.96:0,42,650	0/0:30,0:20:41.78:0,42,535	0/0:23,0:23:42.13:0,42,1084	1/1:20,0:20:19.38:244,19,0	1/1:13,1:14:16.50:223,17,0	0/0:24,0:23:62.79:0,63,828	0/1:12,0:12:99:127,0,131	0/1:14,0:14:99:109,0,354	0/0:9,0:9:12.03:0,12,166	1/1:6,0:6:5.96:46,6,0	0/0:11,0:11:33:0,33,717	0/0:15,0:15:30.56:0,31,710	0/1:20,0:20:99:173,0,435	1/1:11,1:12:3.22:26,3,0	1/1:14,4:19:34.87:573,35,0	1/1:15,0:15:17.34:352,17,0	0/1:9,0:9:57.71:58,0,243	0/1:13,0:12:92.88:93,0,106	0/0:19,0:18:25.58:0,26,317	1/1:6,0:5:3:25,3,0	./.	1/1:14,0:14:7.89:59,8,0	0/1:10,0:10:44.91:45,0,233	0/1:14,0:13:99:218,0,220	0/1:13,0:12:99:129,0,262	0/1:3,0:3:35.84:36,0,80
chr10	56446863	.	T	TGTGTGTGTGCGC	5975	PASS	AB=1.000;AC=25;AF=0.463;AN=54;BaseQRankSum=4.122;DP=467;FS=10.549;HRun=0;HaplotypeScore=150.3398;InbreedingCoeff=0.0102;MQ=51.78;MQ0=6;MQRankSum=-5.451;QD=19.53;ReadPosRankSum=-3.479;VQSLOD=2.4969;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:46:85.19:0,85,2361	0/1:13,0:13:99:123,0,120	0/0:4,0:2:0:0,0,0	0/0:9,0:5:4.68:0,5,26	0/0:26,0:26:66.23:0,66,1569	1/1:6,13:19:2.94:186,3,0	1/1:6,0:24:8.95:225,9,0	0/1:20,0:18:99:364,0,414	0/1:20,0:18:75.64:400,0,76	0/1:24,0:24:99:640,0,493	0/0:10,0:10:6.01:0,6,65	1/1:12,0:12:3:38,3,0	0/0:10,0:10:27.08:0,27,769	0/0:17,0:17:36.11:0,36,913	0/1:17,0:15:11.97:409,0,12	./.	1/1:25,0:26:53.89:1118,54,0	1/1:7,10:21:20.91:672,21,0	0/1:11,0:11:99:292,0,120	0/1:16,0:16:99:215,0,183	0/0:15,0:13:12.29:0,12,153	1/1:10,0:8:2.99:41,3,0	1/1:8,0:8:9.03:120,9,0	0/0:16,0:16:0.33:0,0,1	0/1:17,0:17:30.65:31,0,131	0/1:23,0:21:99:402,0,414	0/1:17,0:16:99:622,0,182	0/1:7,0:6:76.78:77,0,180
chr10	56446875	.	C	CGCGC	888.38	PASS	AB=1.000;AC=22;AF=0.407;AN=54;BaseQRankSum=4.561;DP=388;FS=14.366;HRun=0;HaplotypeScore=87.6796;InbreedingCoeff=0.2973;MQ=59.67;MQ0=1;MQRankSum=-0.962;QD=4.83;ReadPosRankSum=-1.734;VQSLOD=0.7704;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:61.43:0,61,1153	0/1:14,0:13:0.59:1,0,125	0/1:6,0:4:0:0,0,0	0/1:11,0:8:1.61:2,0,14	0/0:23,0:23:51.16:0,51,805	1/1:10,0:10:3.01:64,3,0	1/1:16,0:16:3.01:75,3,0	0/0:14,0:14:33.05:0,33,468	0/1:15,0:13:44.37:44,0,83	0/0:18,0:18:18.80:0,19,497	0/0:7,0:7:6.01:0,6,64	0/0:4,6:11:0:0,0,0	0/0:9,0:9:21.07:0,21,353	0/0:18,0:17:30.09:0,30,471	0/1:14,0:13:12.19:43,0,12	./.	1/1:23,0:23:32.87:491,33,0	1/1:10,0:10:6.02:128,6,0	0/0:14,0:14:4.20:0,4,132	0/0:10,0:10:1.69:0,2,197	0/1:13,0:12:9.15:9,0,125	1/1:6,0:5:3.01:41,3,0	1/1:8,0:8:9.03:120,9,0	1/1:15,0:15:0.39:1,0,0	0/1:13,0:13:3.18:3,0,132	0/0:23,0:20:10.15:0,10,421	0/1:10,0:10:18.26:18,0,183	0/0:7,0:6:15.05:0,15,198
chr10	56446888	.	T	TA	803.85	PASS	AB=0.923;AC=5;AF=0.089;AN=56;BaseQRankSum=-5.883;DP=365;FS=3.800;HRun=3;HaplotypeScore=61.5036;InbreedingCoeff=0.6616;MQ=62.84;MQ0=5;MQRankSum=0.703;QD=19.61;ReadPosRankSum=-1.218;VQSLOD=2.9864;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:87.03:0,87,945	1/1:0,8:8:24.08:320,24,0	0/0:11,0:5:11.87:0,12,96	0/0:16,0:9:20.58:0,21,197	0/0:21,0:21:54.13:0,54,620	0/0:12,0:12:8.99:0,9,91	0/0:12,0:12:8.98:0,9,81	1/1:3,18:18:53.97:601,54,0	0/0:12,0:12:29.70:0,30,253	0/0:15,0:15:45.12:0,45,520	0/0:10,0:10:26.91:0,27,284	0/0:7,0:7:11.95:0,12,113	0/0:10,0:10:30.03:0,30,320	0/0:17,0:16:45.02:0,45,479	0/0:13,0:13:32.82:0,33,290	0/0:5,0:5:8.83:0,9,60	0/0:23,0:23:65.94:0,66,764	0/1:11,0:12:9.50:9,0,95	0/0:14,0:11:30.06:0,30,343	0/0:9,0:9:26.98:0,27,301	0/0:9,0:9:24.04:0,24,272	0/0:2,0:2:3.01:0,3,36	0/0:11,0:11:32.86:0,33,338	0/0:11,0:11:18.65:0,19,141	0/0:12,0:12:29.94:0,30,303	0/0:21,0:20:48.13:0,48,555	0/0:11,0:11:29.96:0,30,313	0/0:7,0:7:21.04:0,21,237
chr10	56447482	.	T	TAAC	9805.62	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=15.733;DP=738;FS=15.167;HRun=0;HaplotypeScore=125.0830;InbreedingCoeff=0.9961;MQ=61.98;MQ0=0;MQRankSum=-0.173;QD=28.93;ReadPosRankSum=-3.208;VQSLOD=3.3333;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:73.37:0,73,980	1/1:0,9:9:21.06:421,21,0	0/0:25,0:22:24.05:0,24,290	0/0:29,0:24:23.85:0,24,274	0/0:32,0:32:74.75:0,75,947	0/0:31,0:31:63.11:0,63,784	0/0:20,0:20:45.06:0,45,530	1/1:18,36:54:99:1320,111,0	1/1:13,8:21:39:657,39,0	1/1:4,18:23:51.09:870,51,0	1/1:6,12:18:33.11:653,33,0	0/0:27,0:27:63.18:0,63,860	0/0:21,0:21:45.04:0,45,527	0/0:18,0:18:45.12:0,45,603	1/1:9,27:36:54.19:1074,54,0	0/0:38,0:38:84.22:0,84,1120	0/0:43,0:43:89.01:0,89,1053	0/0:21,0:21:39.03:0,39,484	1/1:8,9:17:29.21:337,29,0	1/1:8,19:26:41.97:749,42,0	1/1:3,13:16:24.01:435,24,0	0/0:13,0:13:27.05:0,27,331	0/0:24,0:24:60.20:0,60,853	0/0:21,0:21:50.92:0,51,603	1/1:4,17:21:40.02:753,40,0	1/1:13,29:42:83.92:1286,84,0	1/1:13,29:43:48:950,48,0	1/1:1,8:10:15.05:298,15,0
chr10	56448585	.	AG	A	4168.62	PASS	AB=0.538;AC=51;AF=0.944;AN=54;BaseQRankSum=3.387;DP=197;FS=0.000;HRun=1;HaplotypeScore=55.5503;InbreedingCoeff=0.3371;MQ=40.95;MQ0=0;MQRankSum=-2.560;QD=21.38;ReadPosRankSum=3.396;VQSLOD=3.7825;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,7:8:21.69:152,22,0	0/1:1,6:7:1.08:115,0,1	1/1:1,0:1:2.84:14,3,0	./.	1/1:0,9:9:26.84:209,27,0	1/1:0,11:11:32.87:261,33,0	1/1:0,8:8:23.93:189,24,0	1/1:1,20:21:58.38:392,58,0	1/1:1,14:15:41.77:320,42,0	1/1:1,6:7:17.02:123,17,0	1/1:0,3:3:8.92:67,9,0	1/1:0,8:8:23.94:191,24,0	1/1:0,6:6:17.96:144,18,0	1/1:0,6:6:17.92:138,18,0	1/1:0,5:5:14.83:106,15,0	1/1:0,10:10:29.92:237,30,0	1/1:0,8:8:20.88:160,21,0	0/0:2,0:2:2.97:0,3,20	1/1:0,8:8:23.81:194,24,0	1/1:0,6:6:17.76:124,18,0	1/1:0,2:2:5.92:41,6,0	1/1:0,9:9:23.90:193,24,0	1/1:0,8:8:23.81:178,24,0	1/1:0,3:3:5.87:35,6,0	1/1:0,9:9:26.75:205,27,0	1/1:0,9:9:26.78:200,27,0	1/1:0,7:7:20.88:158,21,0	1/1:0,1:1:2.99:23,3,0
chr10	56449559	.	GT	G	5411.37	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=12.737;DP=556;FS=19.576;HRun=7;HaplotypeScore=59.2133;InbreedingCoeff=0.9991;MQ=71.18;MQ0=0;MQRankSum=1.805;QD=24.60;ReadPosRankSum=0.484;VQSLOD=3.2088;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:78.25:0,78,981	0/0:13,0:13:39.12:0,39,491	0/0:13,0:13:32.57:0,33,339	0/0:11,0:11:20.40:0,20,252	0/0:25,0:25:72.23:0,72,901	0/0:21,0:21:60.19:0,60,754	0/0:20,0:20:57.17:0,57,703	0/0:20,0:20:60.17:0,60,723	1/1:0,17:17:39.09:398,39,0	1/1:2,16:18:48.09:484,48,0	1/1:0,11:11:33.07:336,33,0	0/0:23,0:23:63.19:0,63,776	0/0:24,0:24:60.19:0,60,755	0/0:21,0:21:57.17:0,57,695	1/1:4,17:21:48.10:490,48,0	0/0:27,1:28:35.60:0,36,736	0/0:16,0:16:45.14:0,45,565	0/0:25,0:25:75.24:0,75,944	1/1:2,13:15:39.04:382,39,0	1/1:3,16:19:42.09:428,42,0	1/1:4,42:46:99:1133,111,0	0/0:17,0:17:51.16:0,51,640	0/0:14,0:14:36.11:0,36,447	0/0:16,0:16:45.13:0,45,554	1/1:1,18:19:39.09:397,39,0	1/1:2,20:22:60.08:600,60,0	1/1:3,18:21:44.87:459,45,0	1/1:0,11:11:30.07:306,30,0
chr10	56452440	.	GTA	G	2905.42	PASS	AB=0.962;AC=28;AF=0.500;AN=56;BaseQRankSum=4.765;DP=320;FS=1.145;HRun=0;HaplotypeScore=52.5696;InbreedingCoeff=0.7085;MQ=94.50;MQ0=1;MQRankSum=-0.071;QD=13.77;ReadPosRankSum=-0.976;VQSLOD=3.2332;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:33.11:0,33,533	1/1:3,0:3:3.01:39,3,0	0/1:21,0:16:12.63:13,0,106	0/1:37,0:27:7.17:7,0,73	0/0:10,0:10:21.07:0,21,350	0/0:11,0:11:27.09:0,27,459	0/0:7,0:7:12.03:0,12,174	1/1:43,0:43:72.25:525,72,0	1/1:1,3:4:3.01:39,3,0	1/1:2,9:11:30.10:390,30,0	1/1:3,6:9:9.03:117,9,0	0/0:6,0:6:18.05:0,18,280	0/0:8,0:8:12.04:0,12,196	0/0:4,0:4:9.03:0,9,149	1/1:0,2:2:6.02:78,6,0	0/0:5,0:5:12.04:0,12,204	0/0:19,0:19:42.14:0,42,702	0/0:11,0:11:24.08:0,24,389	1/1:2,9:11:27.07:335,27,0	1/1:2,5:7:9.03:117,9,0	1/1:1,4:5:9.03:117,9,0	0/0:3,0:3:3.01:0,3,47	0/0:8,0:8:12.04:0,12,204	0/0:3,0:3:3.01:0,3,51	1/1:1,11:12:15.05:195,15,0	1/1:2,14:16:42.14:540,42,0	1/1:1,14:15:29.93:365,30,0	1/1:3,8:11:18.06:234,18,0
chr10	56455063	.	G	GA	2365.42	PASS	AB=0.981;AC=24;AF=0.429;AN=56;BaseQRankSum=0.289;DP=520;FS=7.671;HRun=10;HaplotypeScore=60.5653;InbreedingCoeff=0.8355;MQ=47.33;MQ0=33;MQRankSum=-2.650;QD=10.75;ReadPosRankSum=-1.948;VQSLOD=1.9686;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:32:61.63:0,62,495	0/0:3,0:3:5.98:0,6,49	0/0:19,0:4:2.61:0,3,32	0/1:21,0:5:4.28:4,0,17	0/0:29,1:30:18.92:0,19,348	0/0:18,0:18:38.92:0,39,319	0/0:11,0:10:20.04:0,20,138	0/0:21,0:20:41.07:0,41,319	1/1:6,8:13:18.01:181,18,0	1/1:11,7:14:25.71:236,26,0	1/1:6,9:15:23.56:205,24,0	0/0:17,0:18:36.21:0,36,276	0/0:10,0:10:15.11:0,15,125	0/0:18,0:17:38.81:0,39,304	1/1:4,13:15:18.04:187,18,0	0/0:12,0:12:13.80:0,14,141	0/0:38,0:35:61.85:0,62,442	0/0:30,0:26:58.69:0,59,463	1/1:13,12:22:52.21:447,52,0	1/1:4,11:14:19.44:170,19,0	1/1:7,1:5:8.98:84,9,0	0/1:11,0:11:1.49:1,0,87	0/0:17,0:16:29.87:0,30,237	0/0:19,0:18:31.73:0,32,231	1/1:4,7:10:11.90:109,12,0	1/1:10,20:27:51.77:486,52,0	1/1:1,21:20:33.08:351,33,0	1/1:7,1:7:10.99:116,11,0
chr10	56456590	.	T	TG	1071.23	PASS	AB=1.000;AC=12;AF=0.214;AN=56;BaseQRankSum=-0.630;DP=584;FS=13.030;HRun=0;HaplotypeScore=104.7639;InbreedingCoeff=0.1024;MQ=49.25;MQ0=21;MQRankSum=0.799;QD=4.94;ReadPosRankSum=3.228;VQSLOD=2.4575;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:50.78:0,51,566	0/0:6,0:6:17:0,17,111	0/0:27,0:7:14.37:0,14,137	0/0:25,0:9:8.37:0,8,138	0/0:29,0:28:67.91:0,68,642	0/0:13,0:12:28.96:0,29,187	0/0:16,0:15:16.57:0,17,183	0/0:29,0:28:71.60:0,72,528	0/1:14,0:12:48.98:64,0,49	0/1:33,0:32:69.02:285,0,69	0/1:25,0:25:77.76:153,0,78	0/0:21,0:20:46.14:0,46,342	0/0:14,0:13:34.53:0,35,294	0/0:14,0:12:21.72:0,22,206	1/1:29,0:28:15.52:235,16,0	0/0:20,0:20:42.11:0,42,287	0/0:25,0:24:38.88:0,39,251	0/0:25,0:24:49.14:0,49,342	0/1:31,0:26:91.22:91,0,176	0/1:28,0:27:67.98:109,0,68	0/1:8,0:6:7.88:38,0,8	0/0:14,0:13:23.83:0,24,173	0/0:23,0:22:48.56:0,49,333	0/0:22,0:20:34.30:0,34,244	0/0:7,6:12:13.87:0,14,77	0/1:25,0:24:48.65:206,0,49	0/1:22,0:20:24.85:25,0,54	1/1:2,0:2:2.97:20,3,0
chr10	56458009	.	TTTTTTTTTTTTTTTTTC	T	634.28	PASS	AB=0.955;AC=12;AF=0.214;AN=56;BaseQRankSum=4.991;DP=571;FS=26.065;HRun=0;HaplotypeScore=150.7419;InbreedingCoeff=0.0037;MQ=48.62;MQ0=105;MQRankSum=-1.243;QD=3.45;ReadPosRankSum=0.781;VQSLOD=0.6274;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:37:67.03:0,67,3071	1/1:11,0:9:1.13:5,1,0	0/0:41,0:10:7.38:0,7,103	0/0:50,0:8:16.40:0,16,270	0/0:28,0:23:42.12:0,42,1860	0/0:12,0:10:3.01:0,3,45	0/1:16,1:10:86.60:90,0,87	1/1:18,5:20:11.70:184,12,0	0/0:9,0:6:9.03:0,9,104	0/0:16,0:11:10.15:0,10,73	0/0:17,0:14:14.83:0,15,109	0/1:8,0:6:9.54:61,0,10	0/0:16,0:15:24.92:0,25,910	0/0:14,0:13:24.08:0,24,1244	0/0:17,0:9:9.03:0,9,112	0/0:12,0:11:14.85:0,15,111	0/0:27,0:12:6.80:0,7,41	0/1:27,8:27:91.07:91,0,394	0/0:18,0:13:0.78:0,1,48	0/1:12,0:9:17.14:17,0,162	0/0:17,0:10:14.51:0,15,83	0/1:20,0:15:28.30:58,0,28	0/1:11,1:12:29.09:162,0,29	0/0:21,0:16:14.80:0,15,98	0/1:20,1:13:99:104,0,136	0/1:25,0:22:4.99:5,0,79	0/0:13,0:10:11.80:0,12,76	0/0:17,0:7:5.98:0,6,53
chr10	56459268	.	C	CTT	23625.97	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-14.602;DP=607;FS=2.595;HRun=1;HaplotypeScore=57.8164;InbreedingCoeff=0.9962;MQ=87.90;MQ0=6;MQRankSum=-7.207;QD=52.50;ReadPosRankSum=4.142;VQSLOD=4.8700;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,138,2168	1/1:0,6:6:15.05:305,15,0	0/0:29,0:29:77.86:0,78,1157	0/0:20,0:20:50.97:0,51,751	0/0:25,0:25:75.16:0,75,1138	1/1:0,19:19:45.15:914,45,0	1/1:0,19:20:51.18:1035,51,0	1/1:0,27:28:84.26:1583,84,0	1/1:0,24:24:60.21:1219,60,0	1/1:1,26:27:78.20:1400,78,0	1/1:0,18:19:51.18:1035,51,0	1/1:0,11:10:27.09:548,27,0	0/0:11,0:11:33.11:0,33,529	0/0:26,0:26:75.24:0,75,1192	1/1:0,24:24:66.23:1341,66,0	1/1:0,28:28:69.24:1401,69,0	1/1:1,22:24:51.18:1035,51,0	1/1:0,24:25:63.22:1279,63,0	1/1:0,24:26:78.24:1466,78,0	1/1:0,23:22:66.16:1262,66,0	1/1:0,24:23:57.20:1157,57,0	1/1:0,13:13:39.13:790,39,0	1/1:0,10:10:27.05:507,27,0	1/1:0,23:23:57.20:1157,57,0	1/1:0,14:14:39.13:792,39,0	1/1:0,23:23:69.21:1330,69,0	1/1:0,25:25:72.25:1461,72,0	1/1:0,10:10:30.10:609,30,0
chr10	56459604	.	T	TTTTTCTTTTCTTTTC	4857.66	PASS	AC=22;AF=0.407;AN=54;BaseQRankSum=8.336;DP=582;FS=0.528;HRun=0;HaplotypeScore=228.0157;InbreedingCoeff=0.8987;MQ=60.21;MQ0=3;MQRankSum=-9.689;QD=20.76;ReadPosRankSum=-1.288;VQSLOD=3.4317;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:60.13:0,60,1909	1/1:7,0:6:9.03:227,9,0	./.	0/0:19,0:8:0:0,0,0	0/0:20,0:20:18.06:0,18,738	1/1:17,0:16:26.66:459,27,0	1/1:16,0:15:12.02:297,12,0	1/1:41,0:40:34.88:438,35,0	0/0:11,0:11:18.06:0,18,738	0/0:25,0:25:26.96:0,27,620	0/0:16,0:16:39.13:0,39,1355	1/1:27,0:27:41.61:642,42,0	0/0:16,0:16:24.05:0,24,783	0/0:18,0:18:15.05:0,15,537	0/0:23,0:24:27.06:0,27,774	1/1:19,0:16:14.90:263,15,0	1/1:24,0:24:26.81:537,27,0	1/1:24,0:24:30.37:927,30,0	0/0:25,0:24:21.05:0,21,622	0/0:23,0:23:33:0,33,896	0/0:24,0:24:36.03:0,36,928	1/1:14,7:19:6.02:346,6,0	1/1:10,8:18:9.03:480,9,0	1/1:20,0:20:11.47:241,11,0	0/0:18,0:18:27.09:0,27,955	0/0:25,0:26:24.07:0,24,757	0/0:25,0:24:39.12:0,39,1445	0/0:8,0:8:3:0,3,26
chr10	56459614	.	C	CTT	1158.16	PASS	AB=0.615;AC=2;AF=0.036;AN=56;BaseQRankSum=-2.551;DP=590;FS=0.690;HRun=4;HaplotypeScore=77.3517;InbreedingCoeff=-0.0381;MQ=59.34;MQ0=10;MQRankSum=2.280;QD=25.74;ReadPosRankSum=-1.829;VQSLOD=1.6430;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:93.30:0,93,1235	0/1:3,4:6:24.84:192,0,25	0/0:14,0:11:18.49:0,18,211	0/0:31,0:10:14.62:0,15,183	0/0:21,0:21:57.17:0,57,744	0/0:17,0:16:45.15:0,45,593	0/0:16,0:15:35.98:0,36,449	0/1:12,26:36:99:1055,0,258	0/0:11,0:11:33.11:0,33,439	0/0:23,0:23:52:0,52,825	0/0:17,0:16:48.14:0,48,625	0/0:30,0:30:82.81:0,83,1057	0/0:17,0:17:45.15:0,45,600	0/0:13,0:13:36.10:0,36,465	0/0:24,0:24:60.08:0,60,744	0/0:19,0:16:45.05:0,45,553	0/0:27,0:27:52.15:0,52,790	0/0:22,0:23:46.18:0,46,682	0/0:26,0:23:66.14:0,66,819	0/0:23,0:23:66.22:0,66,879	0/0:23,0:23:60.16:0,60,767	0/0:23,0:20:7.73:0,8,247	0/0:19,0:19:19.18:0,19,374	0/0:19,0:19:36.07:0,36,470	0/0:19,0:19:54.11:0,54,679	0/0:24,0:24:69.15:0,69,872	0/0:27,0:26:72.23:0,72,957	0/0:7,0:7:21.07:0,21,280
chr10	56460049	.	A	AC	8065.09	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-16.865;DP=691;FS=3.210;HRun=3;HaplotypeScore=67.7071;InbreedingCoeff=0.9993;MQ=74.07;MQ0=0;MQRankSum=-1.335;QD=36.83;ReadPosRankSum=2.454;VQSLOD=5.6080;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,111,1331	0/0:8,0:8:24.06:0,24,277	0/0:15,0:15:42.12:0,42,488	0/0:15,0:15:41.96:0,42,447	0/0:28,0:28:69.19:0,69,816	1/1:3,20:23:54.18:756,54,0	1/1:1,19:20:57.19:797,57,0	0/0:19,0:19:54.16:0,54,648	0/0:24,0:24:69.21:0,69,826	0/0:34,0:34:96.29:0,96,1143	0/0:23,0:22:48.14:0,48,565	1/1:0,27:27:75.25:1050,75,0	0/0:32,0:32:93.29:0,93,1114	0/0:25,0:25:75.23:0,75,900	0/0:48,0:48:99:0,123,1476	1/1:1,34:35:96.32:1344,96,0	1/1:0,22:22:57.19:798,57,0	1/1:2,16:18:48.16:660,48,0	0/0:25,0:25:63.19:0,63,754	0/0:23,0:23:66.20:0,66,792	0/0:37,0:37:99:0,99,1188	1/1:2,26:28:66.08:917,66,0	1/1:2,21:23:57.19:791,57,0	1/1:1,22:23:69.22:951,69,0	0/0:12,0:12:30.09:0,30,360	0/0:28,0:28:84.26:0,84,1008	0/0:25,0:25:75.23:0,75,898	0/0:11,0:11:24.07:0,24,288
chr10	56460119	.	C	CT	6720.84	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-12.640;DP=628;FS=9.747;HRun=9;HaplotypeScore=68.1457;InbreedingCoeff=0.9896;MQ=71.28;MQ0=0;MQRankSum=-0.486;QD=24.98;ReadPosRankSum=0.003;VQSLOD=5.1674;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,1:43:68.76:0,69,826	0/0:8,0:8:23.98:0,24,205	0/0:22,0:13:21.33:0,21,192	0/0:17,0:17:15.36:0,15,172	0/0:30,0:32:62.38:0,62,670	0/0:17,0:17:50.99:0,51,443	0/0:15,0:15:41.03:0,41,344	0/0:26,0:26:56.96:0,57,495	1/1:6,18:24:29.02:509,29,0	1/1:8,25:34:58:845,58,0	1/1:4,16:20:21.99:443,22,0	0/0:25,0:25:68.98:0,69,599	0/0:31,0:31:83.97:0,84,729	0/0:17,0:17:35.98:0,36,312	1/1:4,37:41:90.24:995,90,0	0/0:18,0:18:47.98:0,48,417	0/0:16,0:16:41.99:0,42,364	0/0:16,0:17:50:0,50,417	1/1:5,20:24:60.14:651,60,0	1/1:3,18:21:54.15:597,54,0	1/1:3,10:13:30.08:332,30,0	0/0:15,0:15:44.99:0,45,391	0/0:19,0:19:44.97:0,45,391	0/0:20,0:20:47.98:0,48,416	1/1:3,14:17:10.05:339,10,0	1/1:4,24:30:75.73:783,76,0	1/1:2,29:31:78.21:863,78,0	1/1:0,13:13:33.09:365,33,0
chr10	56461131	.	TA	T	3818.96	PASS	AB=0.992;AC=32;AF=0.571;AN=56;BaseQRankSum=-1.982;DP=491;FS=9.066;HRun=1;HaplotypeScore=53.0809;InbreedingCoeff=-0.0311;MQ=52.62;MQ0=8;MQRankSum=-2.060;QD=9.01;ReadPosRankSum=-0.972;VQSLOD=-0.0061;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:16,0:16:82.85:83,0,89	0/0:2,0:2:0.91:0,1,27	0/1:44,2:11:23.50:23,0,110	0/0:33,1:11:14.66:0,15,82	0/1:31,0:31:39.93:40,0,298	1/1:21,1:22:57.35:390,57,0	1/1:11,0:11:32.43:260,32,0	0/1:23,0:22:39.85:40,0,308	0/0:11,0:10:11.36:0,11,176	0/1:14,0:14:5.53:6,0,209	0/1:9,0:9:20.02:20,0,51	1/1:19,0:19:54.02:396,54,0	0/1:13,0:13:29.63:30,0,107	0/1:13,1:14:36.47:36,0,172	0/1:11,0:10:8.38:8,0,171	1/1:17,0:17:29.79:231,30,0	1/1:29,2:29:47.77:368,48,0	1/1:33,0:33:77.27:566,77,0	0/1:10,0:9:9.85:10,0,128	0/1:5,0:5:4.66:32,0,5	0/0:7,0:5:0.28:0,0,51	1/1:18,1:19:54.78:392,55,0	1/1:18,1:19:51.56:364,52,0	1/1:24,0:23:56.85:454,57,0	0/1:10,0:10:22.23:22,0,98	0/1:16,0:14:42.94:43,0,55	0/1:11,0:11:4.25:4,0,155	0/0:13,0:12:21.17:0,21,194
chr10	56461509	.	T	TAATAATAATA	20065.95	PASS	AC=42;AF=0.778;AN=54;BaseQRankSum=-1.924;DP=368;FS=13.154;HRun=0;HaplotypeScore=100.6563;InbreedingCoeff=0.8911;MQ=74.13;MQ0=0;MQRankSum=-8.098;QD=74.87;ReadPosRankSum=-0.957;VQSLOD=3.8477;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:72.24:0,72,2079	1/1:0,2:4:6.02:319,6,0	0/0:16,0:16:6.63:0,7,610	0/0:11,0:12:15.43:0,15,339	0/0:17,0:17:51.13:0,51,1317	1/1:5,0:24:60.14:1539,60,0	1/1:1,0:3:6.02:163,6,0	1/1:14,23:46:99:3985,123,0	1/1:0,5:6:12.04:638,12,0	1/1:3,9:15:30.09:989,30,0	1/1:1,4:6:18.06:661,18,0	1/1:0,0:6:12.04:297,12,0	0/0:14,0:14:39.12:0,39,1090	0/0:14,0:14:42.07:0,42,980	1/1:6,3:11:15.05:629,15,0	1/1:2,0:13:24.01:592,24,0	1/1:3,0:11:21.07:550,21,0	1/1:4,0:10:9.03:201,9,0	1/1:4,9:18:54.17:1751,54,0	1/1:2,6:9:21.07:872,21,0	./.	1/1:1,0:8:18.06:305,18,0	1/1:1,0:8:12.04:320,12,0	1/1:2,0:9:12.04:313,12,0	1/1:2,11:14:27.09:1432,27,0	1/1:4,13:20:51.17:2118,51,0	1/1:0,13:15:18.06:957,18,0	1/1:1,10:12:27.09:1435,27,0
chr10	56462226	.	A	AT	7310.86	PASS	AB=1.000;AC=45;AF=0.804;AN=56;BaseQRankSum=-10.300;DP=500;FS=3.649;HRun=11;HaplotypeScore=52.7054;InbreedingCoeff=0.8007;MQ=76.00;MQ0=3;MQRankSum=-0.311;QD=18.70;ReadPosRankSum=3.622;VQSLOD=5.8799;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:88.96:0,89,669	1/1:2,2:4:3.01:30,3,0	0/0:28,0:16:23.94:0,24,143	0/0:18,0:11:16.50:0,16,91	0/0:19,0:19:44.71:0,45,337	1/1:1,15:17:38.91:379,39,0	1/1:0,23:23:57.11:577,57,0	1/1:4,21:24:60.51:579,61,0	1/1:2,8:10:18.04:182,18,0	1/1:4,12:16:35.97:328,36,0	1/1:6,10:16:9.44:279,9,0	1/1:2,9:11:21.04:212,21,0	0/0:10,0:10:11.98:0,12,148	0/1:7,0:7:3.71:4,0,76	1/1:3,10:13:24.01:233,24,0	1/1:6,15:21:36.07:365,36,0	1/1:4,25:29:54.11:546,54,0	1/1:2,22:24:51.10:516,51,0	1/1:10,16:26:41.95:402,42,0	1/1:0,13:13:35.87:337,36,0	1/1:3,10:14:21:202,21,0	1/1:3,9:12:3.82:220,4,0	1/1:3,13:16:27.52:274,28,0	1/1:6,20:26:24.81:419,25,0	1/1:5,13:18:3.69:192,4,0	1/1:7,23:30:65.86:603,66,0	1/1:4,11:15:33.05:327,33,0	1/1:1,3:5:11.86:105,12,0
chr10	56462491	.	TTGCCTAGCAAGCG	T	1549.20	PASS	AC=4;AF=0.077;AN=52;BaseQRankSum=6.471;DP=354;FS=2.217;HRun=0;HaplotypeScore=124.0357;InbreedingCoeff=0.8231;MQ=54.01;MQ0=5;MQRankSum=-6.465;QD=46.95;ReadPosRankSum=-0.016;VQSLOD=3.1957;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:67.11:0,67,4375	1/1:0,10:10:15.05:594,15,0	./.	./.	0/0:7,0:7:18.02:0,18,816	0/0:16,0:16:30.08:0,30,1507	0/0:20,0:20:60.21:0,60,3652	1/1:0,23:14:33.03:1072,33,0	0/0:6,0:6:18.06:0,18,1215	0/0:10,0:8:21.07:0,21,1397	0/0:3,0:3:6.02:0,6,393	0/0:27,0:27:81.28:0,81,5056	0/0:17,0:17:45.15:0,45,2632	0/0:15,0:15:41.84:0,42,2465	0/0:21,0:21:63.22:0,63,3843	0/0:15,0:15:41.84:0,42,2785	0/0:29,0:28:81.26:0,81,4912	0/0:17,0:17:51.18:0,51,3098	0/0:7,0:7:18.06:0,18,1030	0/0:5,0:5:12.04:0,12,813	0/0:7,0:6:14.77:0,15,777	0/0:10,0:10:24.08:0,24,1218	0/0:4,0:3:9.03:0,9,539	0/0:13,0:13:39.13:0,39,2205	0/0:4,0:4:5.91:0,6,406	0/0:14,0:14:39.13:0,39,2267	0/0:23,0:23:69.24:0,69,4072	0/0:4,0:4:12.04:0,12,769
chr10	56462968	.	C	CCTAT	4976.96	PASS	AB=0.814;AC=23;AF=0.442;AN=52;BaseQRankSum=-9.696;DP=654;FS=9.769;HRun=0;HaplotypeScore=105.9474;InbreedingCoeff=0.7018;MQ=57.85;MQ0=1;MQRankSum=3.450;QD=15.27;ReadPosRankSum=-1.655;VQSLOD=3.6710;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:45.15:0,45,679	0/0:2,0:9:8.98:0,9,83	./.	./.	0/0:20,0:20:27.07:0,27,372	0/0:15,0:23:15.02:0,15,140	0/0:11,0:22:15.02:0,15,140	1/1:36,0:36:7.59:28,8,0	1/1:7,14:23:18.06:422,18,0	1/1:19,14:35:45.19:879,45,0	1/1:11,5:16:3.01:71,3,0	0/0:5,0:17:9.01:0,9,84	0/0:23,0:23:33.09:0,33,472	0/0:19,0:19:39.13:0,39,606	1/1:14,18:34:33.11:773,33,0	0/0:10,0:27:24.97:0,25,248	0/0:29,0:29:54.15:0,54,789	0/0:12,0:12:6.02:0,6,93	0/1:16,4:17:31.56:227,0,32	1/1:14,14:28:27.09:633,27,0	1/1:7,12:20:15.05:353,15,0	0/0:12,0:12:1.82:0,2,5	0/1:8,0:15:0.01:0,0,0	0/0:11,0:23:24.03:0,24,224	1/1:14,12:27:15.05:318,15,0	1/1:17,13:30:42.11:796,42,0	0/1:10,15:28:46.15:264,0,46	1/1:10,4:13:9.03:212,9,0
chr10	56463559	.	CTTTTTTTTTT	C	6158.94	PASS	AB=0.923;AC=23;AF=0.411;AN=56;BaseQRankSum=9.213;DP=356;FS=1.749;HRun=20;HaplotypeScore=97.6646;InbreedingCoeff=0.7394;MQ=58.13;MQ0=7;MQRankSum=-8.778;QD=41.34;ReadPosRankSum=8.215;VQSLOD=1.0716;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:29:66.20:0,66,2189	0/0:3,0:3:9.03:0,9,375	0/0:24,0:12:18.27:0,18,384	0/0:17,0:6:2.63:0,3,43	0/0:13,0:12:33.11:0,33,1106	0/0:17,0:19:51.16:0,51,1963	0/0:3,0:4:9.03:0,9,309	0/0:21,0:21:36.12:0,36,1109	1/1:1,11:12:23.97:620,24,0	1/1:0,12:12:36.12:931,36,0	1/1:1,3:4:2.76:77,3,0	0/0:2,0:5:9.03:0,9,241	0/0:4,0:3:3.01:0,3,149	0/0:8,0:8:12.04:0,12,439	1/1:3,6:9:11.56:306,12,0	0/1:11,1:11:56.53:57,0,639	0/0:10,0:23:18.06:0,18,634	0/0:20,0:23:60.21:0,60,2381	1/1:9,4:12:14.32:311,14,0	1/1:3,9:13:23.92:592,24,0	1/1:3,2:5:8.89:189,9,0	0/0:4,0:5:6.02:0,6,220	0/0:4,0:4:3.48:0,3,134	0/0:3,0:2:3.01:0,3,142	1/1:1,10:11:27.02:694,27,0	1/1:8,17:25:50.53:1278,51,0	1/1:8,9:15:32.88:793,33,0	1/1:6,7:12:11.86:310,12,0
chr10	56464370	.	CT	C	4568.05	PASS	AB=0.784;AC=44;AF=0.786;AN=56;BaseQRankSum=3.341;DP=501;FS=0.000;HRun=13;HaplotypeScore=63.4051;InbreedingCoeff=0.4676;MQ=65.70;MQ0=12;MQRankSum=1.131;QD=11.28;ReadPosRankSum=1.459;VQSLOD=4.5251;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,2:19:3.87:0,4,319	0/1:1,3:4:9.15:54,0,9	0/1:18,0:7:2.79:3,0,30	0/0:20,0:6:0:0,0,0	0/0:31,3:37:6:0,6,503	1/1:2,16:18:6.07:192,6,0	1/1:3,1:5:10.97:70,11,0	1/1:11,17:28:41.14:306,41,0	1/1:5,9:13:23.83:175,24,0	1/1:7,20:27:58.69:421,59,0	1/1:4,9:16:3.79:163,4,0	1/1:4,9:13:24.31:175,24,0	0/0:19,0:19:5.41:0,5,195	0/1:21,2:22:1.81:2,0,294	1/1:7,13:20:38.74:284,39,0	1/1:2,10:14:30.89:209,31,0	1/1:7,12:19:8.16:215,8,0	1/1:5,10:14:29.77:219,30,0	1/1:13,6:18:22.78:145,23,0	1/1:1,19:20:50.68:371,51,0	1/1:5,4:8:8.90:66,9,0	1/1:3,2:5:5.96:44,6,0	1/1:4,12:16:29.79:219,30,0	1/1:4,4:12:21.02:127,21,0	1/1:5,22:27:33.46:407,33,0	0/1:12,14:27:2.61:300,0,3	1/1:8,16:25:39.17:286,39,0	1/1:2,5:8:16.95:116,17,0
chr10	56464580	.	CTT	C	7860.30	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=14.095;DP=526;FS=8.143;HRun=2;HaplotypeScore=72.9350;InbreedingCoeff=0.9806;MQ=50.92;MQ0=26;MQRankSum=-2.098;QD=41.81;ReadPosRankSum=0.224;VQSLOD=4.0369;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:33:84.27:0,84,1664	0/0:6,0:5:15.05:0,15,305	0/0:26,0:4:12.04:0,12,217	0/0:24,0:7:14.40:0,14,303	0/0:17,0:17:45.11:0,45,873	0/0:25,0:25:48.16:0,48,974	0/0:21,0:19:45.15:0,45,912	0/0:43,0:38:99:0,108,2128	1/1:1,16:17:51.17:822,51,0	1/1:0,13:13:36.12:587,36,0	1/1:0,10:10:27.05:398,27,0	0/0:17,0:17:48.14:0,48,966	0/0:10,0:10:21.04:0,21,387	0/0:13,0:11:30.08:0,30,539	1/1:1,23:23:60.20:977,60,0	0/0:15,0:15:36.08:0,36,695	0/0:37,0:36:87.27:0,87,1749	0/0:12,0:11:23.95:0,24,486	1/1:0,17:10:24.06:391,24,0	1/1:0,10:10:27.09:394,27,0	1/1:1,30:29:81.27:1286,81,0	0/0:4,0:4:9.03:0,9,182	0/0:9,0:9:27.09:0,27,546	0/0:23,0:22:54.15:0,54,1021	1/1:0,19:19:54.14:826,54,0	1/1:1,23:24:69.21:1067,69,0	1/1:2,12:14:42.14:672,42,0	1/1:0,9:9:27.09:440,27,0
chr10	56464627	.	CT	C	3178.77	PASS	AB=0.799;AC=41;AF=0.732;AN=56;BaseQRankSum=3.836;DP=526;FS=0.000;HRun=15;HaplotypeScore=100.1813;InbreedingCoeff=0.5087;MQ=71.36;MQ0=1;MQRankSum=-1.604;QD=7.44;ReadPosRankSum=4.771;VQSLOD=2.9155;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,4:34:22.06:0,22,397	0/0:2,0:2:0:0,0,0	0/0:25,0:13:8.36:0,8,67	0/1:18,0:16:3.08:3,0,20	0/0:19,1:20:9.11:0,9,180	1/1:8,12:23:6.34:145,6,0	0/1:6,13:22:1.51:184,0,2	1/1:10,4:16:16.50:96,16,0	1/1:5,10:17:28.96:178,29,0	1/1:9,11:22:42:249,42,0	1/1:5,13:20:6.01:136,6,0	1/1:7,17:24:30.30:194,30,0	0/1:11,1:12:1.46:1,0,95	0/0:12,4:16:2.30:0,2,113	1/1:21,10:34:49.88:294,50,0	1/1:5,12:19:33.54:204,34,0	1/1:16,14:31:28.30:249,28,0	1/1:1,9:12:21.32:138,21,0	1/1:8,4:13:18.67:102,19,0	1/1:6,7:14:25.45:153,25,0	0/1:15,5:20:24.04:61,0,24	1/1:1,4:5:5.86:38,6,0	1/1:5,6:12:19.72:121,20,0	1/1:11,7:21:22.98:180,23,0	1/1:6,6:13:19.65:118,20,0	0/1:14,11:25:4.12:204,0,4	1/1:3,14:20:33.42:197,33,0	1/1:5,3:10:17.84:93,18,0
chr10	56469952	.	T	TC	5994.36	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=-7.916;DP=571;FS=0.000;HRun=7;HaplotypeScore=61.6519;InbreedingCoeff=0.9021;MQ=72.38;MQ0=0;MQRankSum=-1.292;QD=24.17;ReadPosRankSum=-1.547;VQSLOD=4.3626;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:66.09:0,66,637	0/0:8,0:8:20.82:0,21,187	0/1:8,0:8:9.27:9,0,98	0/0:9,0:8:10.49:0,10,76	0/0:9,0:9:26.77:0,27,239	0/0:16,0:16:42.97:0,43,431	0/0:27,0:27:72.11:0,72,695	0/0:18,0:18:36.05:0,36,347	1/1:4,23:27:66.19:785,66,0	1/1:4,11:15:33.06:382,33,0	1/1:1,10:12:15.04:176,15,0	0/0:36,0:36:99:0,99,942	0/0:25,0:25:69.11:0,69,666	0/0:33,0:33:90.10:0,90,853	1/1:3,28:31:81.25:978,81,0	0/0:17,0:17:45.06:0,45,428	0/0:29,0:29:78.12:0,78,753	0/0:16,0:16:42.07:0,42,406	1/1:5,16:21:48.12:557,48,0	1/1:0,19:19:45.05:505,45,0	1/1:10,49:59:67.33:1094,67,0	0/0:11,0:11:30.04:0,30,289	0/0:13,0:13:21.02:0,21,202	0/0:29,0:29:78.12:0,78,753	1/1:4,12:16:4.12:333,4,0	1/1:4,13:17:45.13:530,45,0	1/1:2,14:16:36.10:426,36,0	1/1:0,7:7:18.06:217,18,0
chr10	56471037	.	AT	A	2239.94	PASS	AB=0.742;AC=43;AF=0.768;AN=56;BaseQRankSum=1.672;DP=450;FS=1.157;HRun=15;HaplotypeScore=62.8444;InbreedingCoeff=0.5943;MQ=78.24;MQ0=4;MQRankSum=-1.785;QD=6.53;ReadPosRankSum=2.808;VQSLOD=2.7052;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,3:25:19.55:0,20,281	1/1:6,4:10:11.78:77,12,0	0/1:36,1:18:10.04:10,0,106	0/0:32,2:16:17.83:0,18,125	0/0:11,0:15:25.91:0,26,231	1/1:5,17:24:29.54:297,30,0	1/1:3,9:12:29.51:192,30,0	1/1:17,10:28:15.94:211,16,0	1/1:0,0:12:23.20:72,23,0	1/1:4,0:18:23.27:66,23,0	1/1:4,0:12:16.27:47,16,0	1/1:2,8:10:26.60:172,27,0	0/0:17,0:17:29.87:0,30,246	0/0:15,1:16:2.61:0,3,134	1/1:2,1:10:17.20:60,17,0	1/1:4,8:12:23.63:154,24,0	1/1:8,19:30:35.88:337,36,0	0/1:8,16:24:41.01:202,0,41	1/1:5,1:15:19.20:66,19,0	1/1:1,0:2:2.04:6,2,0	1/1:2,0:7:10.17:29,10,0	1/1:5,7:12:11.74:77,12,0	0/1:4,5:9:31.97:75,0,32	1/1:2,5:7:8.82:58,9,0	1/1:3,2:16:24.23:91,24,0	1/1:2,0:13:21.24:61,21,0	1/1:7,0:12:9.68:29,10,0	1/1:2,0:9:10.17:29,10,0
chr10	56471340	.	C	CT	1777.86	PASS	AB=0.775;AC=25;AF=0.446;AN=56;BaseQRankSum=-0.810;DP=515;FS=0.498;HRun=15;HaplotypeScore=70.4604;InbreedingCoeff=0.2303;MQ=67.95;MQ0=9;MQRankSum=-4.048;QD=6.56;ReadPosRankSum=-4.549;VQSLOD=1.3742;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:34:67.13:0,67,400	1/1:3,5:9:17.82:140,18,0	0/0:36,0:14:16.07:0,16,83	0/0:38,0:17:11.70:0,12,64	0/0:16,0:16:16.67:0,17,106	0/0:9,0:10:19.56:0,20,111	0/0:22,1:24:4.85:0,5,138	1/1:10,8:21:23.37:234,23,0	0/1:3,8:10:2.87:85,0,3	0/1:8,11:20:3.73:169,0,4	1/1:6,10:16:6.07:158,6,0	0/0:16,0:16:25.86:0,26,171	0/0:17,1:18:3.12:0,3,121	0/0:19,0:17:15.65:0,16,114	0/1:6,9:16:2.32:76,0,2	0/1:16,1:17:8.58:9,0,143	0/0:24,1:30:14.76:0,15,236	0/1:23,2:25:35.48:35,0,128	1/1:10,11:23:12.19:286,12,0	1/1:3,6:9:13.23:102,13,0	0/1:12,3:17:15.25:123,0,15	0/1:12,0:12:1.87:2,0,72	0/1:5,1:6:23.80:27,0,24	0/1:15,2:16:42.11:42,0,77	1/1:5,7:14:17.51:118,18,0	0/1:7,5:12:4.02:155,0,4	0/1:5,8:13:16.60:94,0,17	1/1:5,5:10:0.38:102,0,0
chr10	56471747	.	ATTAACACT	A	8065.30	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=13.554;DP=482;FS=6.793;HRun=0;HaplotypeScore=128.2385;InbreedingCoeff=0.9725;MQ=66.63;MQ0=0;MQRankSum=-14.873;QD=55.24;ReadPosRankSum=-0.183;VQSLOD=4.4645;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:87.29:0,87,3609	0/0:8,0:8:24.08:0,24,857	0/0:15,0:12:33.10:0,33,901	0/0:14,0:13:27.07:0,27,874	0/0:16,0:16:45.15:0,45,1791	1/1:1,19:20:51.18:1353,51,0	1/1:1,16:17:36.12:962,36,0	0/0:32,0:32:90.31:0,90,3450	0/0:11,0:11:33.11:0,33,1384	0/0:15,0:15:39.13:0,39,1652	0/0:11,0:11:33.11:0,33,1365	1/1:4,14:18:45.11:1140,45,0	0/0:9,0:9:24.08:0,24,1003	0/0:20,0:20:57.19:0,57,2223	0/0:27,0:27:72.25:0,72,3018	1/1:6,20:26:57.14:1447,57,0	1/1:1,14:15:27.09:712,27,0	1/1:3,3:6:6.02:168,6,0	0/0:21,0:21:57.19:0,57,2232	0/0:14,0:14:38.34:0,38,1421	0/0:24,0:24:63.18:0,63,2307	1/1:2,12:15:33.11:870,33,0	1/1:1,19:20:45.15:1199,45,0	1/1:1,8:8:9.03:213,9,0	0/0:19,0:19:54.18:0,54,2201	0/0:18,0:18:54.14:0,54,2192	0/0:22,0:22:60.21:0,60,2479	0/0:7,0:7:21.07:0,21,687
chr10	56471926	.	T	TA	4402.66	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-12.175;DP=539;FS=9.322;HRun=10;HaplotypeScore=53.8858;InbreedingCoeff=0.9578;MQ=73.45;MQ0=0;MQRankSum=2.292;QD=23.29;ReadPosRankSum=0.226;VQSLOD=5.2715;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:59.89:0,60,488	0/0:9,0:9:23.85:0,24,185	0/0:24,0:17:2.38:0,2,138	0/0:17,0:13:7.93:0,8,69	0/0:31,0:31:82.88:0,83,661	0/0:18,0:19:49.96:0,50,400	0/0:26,0:26:71.90:0,72,588	0/0:28,0:28:53.90:0,54,442	1/1:2,6:8:15.04:160,15,0	1/1:1,22:24:63.16:672,63,0	1/1:3,15:18:36.09:384,36,0	0/0:9,0:9:26.96:0,27,219	0/0:14,0:14:35.95:0,36,295	0/0:18,0:19:52.86:0,53,415	1/1:1,15:16:39.10:416,39,0	0/0:29,0:30:73.92:0,74,592	0/0:28,0:28:62.88:0,63,512	0/0:12,0:12:20.88:0,21,161	1/1:6,13:19:17.98:363,18,0	1/1:3,15:18:45.01:445,45,0	1/1:2,15:17:36.09:384,36,0	0/0:12,0:12:35.96:0,36,296	0/0:26,0:26:65.91:0,66,540	0/0:18,0:18:47.93:0,48,392	1/1:3,12:15:30.08:320,30,0	1/1:2,13:15:39.09:409,39,0	1/1:5,17:22:42.07:435,42,0	1/1:2,14:16:39.10:416,39,0
chr10	56476877	.	C	CA	4189.43	PASS	AB=0.742;AC=35;AF=0.625;AN=56;BaseQRankSum=-1.625;DP=555;FS=0.000;HRun=13;HaplotypeScore=74.6601;InbreedingCoeff=0.2162;MQ=55.44;MQ0=12;MQRankSum=-2.177;QD=9.54;ReadPosRankSum=1.314;VQSLOD=3.0026;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,1:28:6.43:0,6,199	0/0:6,0:6:8.91:0,9,62	0/1:7,0:5:13.72:15,0,14	0/1:14,0:8:9.61:10,0,52	0/0:30,0:30:47.47:0,47,328	0/1:11,9:20:26.79:140,0,27	1/1:7,7:14:21.02:195,21,0	0/0:26,1:27:12.73:0,13,221	0/1:6,5:10:0.51:47,0,1	0/1:10,6:16:14.18:151,0,14	1/1:15,10:23:18.90:301,19,0	0/1:8,11:19:17.04:143,0,17	0/0:22,0:21:22.67:0,23,157	0/1:9,3:12:9.90:10,0,85	1/1:2,6:9:11.85:98,12,0	1/1:12,10:22:29.87:264,30,0	0/1:15,15:29:1.91:255,0,2	1/1:15,8:19:15.42:187,15,0	1/1:9,17:25:13.44:375,13,0	1/1:18,14:32:39.04:361,39,0	1/1:1,3:4:9.01:84,9,0	1/1:13,5:21:14.27:140,14,0	0/1:8,10:18:2.24:248,0,2	0/1:9,6:14:2.16:110,0,2	1/1:19,8:26:32.99:298,33,0	1/1:24,15:39:4.05:415,4,0	0/1:9,11:21:28.83:177,0,29	1/1:5,6:10:18.02:167,18,0
chr10	56479112	.	T	TA	5274.31	PASS	AC=26;AF=0.481;AN=54;BaseQRankSum=-6.851;DP=327;FS=19.665;HRun=8;HaplotypeScore=36.4005;InbreedingCoeff=0.9177;MQ=51.03;MQ0=3;MQRankSum=0.589;QD=28.66;ReadPosRankSum=-0.920;VQSLOD=2.8553;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:27:0,27,241	1/1:0,7:7:11.95:121,12,0	./.	0/0:5,0:1:2.99:0,3,23	0/0:17,0:17:48.02:0,48,439	0/0:11,0:11:33:0,33,296	0/0:6,0:6:15:0,15,137	1/1:2,15:17:45.12:511,45,0	1/1:1,7:8:18.05:208,18,0	1/1:1,11:12:33.10:381,33,0	1/1:0,16:16:48.14:554,48,0	0/0:10,0:10:30.01:0,30,271	0/0:11,0:11:32.98:0,33,290	0/0:8,0:8:24:0,24,216	1/1:0,16:16:48.14:554,48,0	0/0:26,0:26:75.03:0,75,686	0/0:13,0:13:39:0,39,352	0/0:6,0:6:17.99:0,18,160	1/1:6,9:11:2.63:284,3,0	1/1:1,13:13:36.11:415,36,0	1/1:1,4:5:12.04:138,12,0	0/0:8,0:8:20.99:0,21,182	0/0:7,0:7:20.99:0,21,183	0/0:3,0:3:6:0,6,55	1/1:0,19:19:48.14:553,48,0	1/1:2,14:16:17.69:448,18,0	1/1:0,27:27:60.16:692,60,0	1/1:0,12:12:36.11:416,36,0
chr10	56483218	.	C	CTGG	3521	PASS	AB=0.797;AC=13;AF=0.260;AN=50;BaseQRankSum=-6.019;DP=385;FS=40.847;HRun=0;HaplotypeScore=53.2026;InbreedingCoeff=0.3187;MQ=44.95;MQ0=45;MQRankSum=-2.525;QD=21.47;ReadPosRankSum=1.128;VQSLOD=1.5138;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:10:15.05:0,15,224	0/0:3,0:1:3.01:0,3,45	./.	./.	0/0:4,0:2:6.02:0,6,90	1/1:4,4:8:5.14:124,5,0	0/1:8,13:19:10.43:527,0,10	0/0:12,0:5:6.02:0,6,90	0/0:8,0:8:12.04:0,12,180	0/0:8,0:7:18.04:0,18,247	0/0:2,0:2:3.01:0,3,45	0/1:12,7:16:5.45:527,0,5	0/0:16,0:15:27.05:0,27,360	0/0:14,0:14:29.97:0,30,418	0/0:16,0:13:21.06:0,21,294	0/1:13,3:16:26.70:186,0,27	1/1:18,13:28:39.12:788,39,0	1/1:14,15:27:5.16:894,5,0	0/0:18,0:7:9.50:0,10,135	./.	0/0:50,0:33:51.13:0,51,730	1/1:2,1:3:3.01:62,3,0	0/0:4,0:3:0.94:0,1,2	0/1:20,7:23:30.36:412,0,30	0/0:9,0:7:18.06:0,18,268	0/0:4,0:4:6.02:0,6,90	0/1:10,0:8:0.08:0,0,144	0/0:5,0:5:6.02:0,6,90
chr10	56483239	.	C	CTGG	924.24	PASS	AB=0.858;AC=9;AF=0.188;AN=48;BaseQRankSum=-1.164;DP=330;FS=4.308;HRun=0;HaplotypeScore=56.6750;InbreedingCoeff=-0.0224;MQ=45.19;MQ0=34;MQRankSum=0.147;QD=8.56;ReadPosRankSum=-3.663;VQSLOD=1.4749;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:17:30.06:0,30,400	./.	./.	0/0:14,0:1:3.01:0,3,40	0/0:4,0:2:6:0,6,68	0/0:6,0:5:11.97:0,12,151	0/1:17,3:17:97.61:98,0,244	0/0:14,0:8:12.04:0,12,177	0/0:8,0:8:15.05:0,15,225	0/0:9,0:8:18.06:0,18,269	0/0:4,0:4:3.01:0,3,45	0/1:13,4:12:99:147,0,112	0/0:12,0:12:21.07:0,21,311	0/0:14,0:13:27.09:0,27,401	0/0:11,0:8:18.05:0,18,250	0/1:3,1:4:50.82:51,0,122	0/1:20,1:18:99:154,0,284	0/1:18,3:20:99:266,0,485	0/0:15,0:5:9.03:0,9,135	./.	0/0:47,0:33:60.13:0,60,849	1/1:1,0:1:3.01:43,3,0	0/1:3,0:1:0:0,0,0	0/1:12,9:18:99:290,0,110	0/0:11,0:9:21.04:0,21,272	./.	0/0:7,0:5:12.04:0,12,179	0/0:3,0:3:3.01:0,3,45
chr10	56484913	.	TGGGGG	T	3233.06	PASS	AB=0.813;AC=22;AF=0.407;AN=54;BaseQRankSum=-2.400;DP=446;FS=3.450;HRun=15;HaplotypeScore=85.7117;InbreedingCoeff=0.6095;MQ=63.47;MQ0=1;MQRankSum=-5.640;QD=15.04;ReadPosRankSum=4.976;VQSLOD=0.2220;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:10:3.01:0,3,70	0/0:2,0:2:3.01:0,3,67	0/0:19,0:10:12.32:0,12,124	0/0:21,0:15:23.76:0,24,422	0/0:12,0:12:3.01:0,3,36	0/0:10,0:11:5.03:0,5,29	0/0:18,0:17:14.55:0,15,169	0/0:12,0:11:9.02:0,9,159	0/1:8,7:9:8.01:132,0,8	1/1:5,8:13:20.55:318,21,0	1/1:9,3:12:8.95:145,9,0	0/0:18,0:18:4.25:0,4,32	./.	0/0:22,0:23:9.03:0,9,202	1/1:11,14:23:29.80:472,30,0	0/1:16,1:17:33.46:33,0,150	0/0:8,0:8:5.99:0,6,50	0/0:16,0:18:14.04:0,14,123	1/1:7,2:9:14.51:198,15,0	1/1:7,4:11:4.20:81,4,0	1/1:14,10:20:17.96:286,18,0	0/0:13,0:14:7.16:0,7,44	0/0:9,0:9:2.80:0,3,13	0/0:17,0:17:12.06:0,12,212	1/1:9,18:28:42.06:673,42,0	1/1:14,9:21:7.54:390,8,0	1/1:13,13:21:17.13:553,17,0	1/1:3,4:7:9:144,9,0
chr10	56484924	.	GGGGGA	G	2027.77	PASS	AB=0.942;AC=13;AF=0.232;AN=56;BaseQRankSum=6.319;DP=439;FS=47.250;HRun=0;HaplotypeScore=87.3743;InbreedingCoeff=-0.1444;MQ=71.57;MQ0=1;MQRankSum=-6.277;QD=9.75;ReadPosRankSum=10.122;VQSLOD=-0.6878;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:7:11.08:0,11,159	0/0:2,0:2:3.01:0,3,62	0/0:29,0:15:14.78:0,15,236	0/0:25,0:19:38.65:0,39,623	0/0:9,0:9:17.94:0,18,234	0/0:8,0:7:5.80:0,6,70	0/0:21,0:17:35.68:0,36,390	0/0:11,0:10:18.02:0,18,228	0/1:13,2:8:24.87:99,0,25	0/1:14,1:14:99:177,0,134	0/1:9,0:8:52.35:86,0,52	0/0:18,0:16:7.93:0,8,171	0/0:12,0:12:17.89:0,18,153	0/0:17,0:14:15.03:0,15,197	1/1:19,2:16:7.90:371,8,0	0/1:17,0:17:22.73:23,0,97	0/0:19,0:16:11.58:0,12,180	0/0:14,0:14:32.20:0,32,347	0/1:9,1:9:70.71:98,0,71	0/1:9,1:10:38.30:38,0,84	0/1:25,2:23:99:179,0,142	0/0:12,0:12:17.49:0,17,202	0/0:7,0:7:19.58:0,20,223	0/0:18,0:16:9.68:0,10,170	0/1:28,0:28:99:370,0,127	0/1:23,2:17:99:231,0,130	0/1:23,4:22:65.62:425,0,66	0/1:4,0:4:7.92:85,0,8
chr10	56484969	.	GT	G	1724.28	PASS	AB=0.771;AC=19;AF=0.339;AN=56;BaseQRankSum=3.254;DP=510;FS=10.356;HRun=13;HaplotypeScore=80.5646;InbreedingCoeff=0.5850;MQ=68.66;MQ0=0;MQRankSum=0.384;QD=8.25;ReadPosRankSum=2.381;VQSLOD=1.9924;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:15,1:15:4.98:0,5,196	0/0:1,1:5:5.85:0,6,44	0/1:8,1:12:25.65:26,0,78	0/1:11,1:13:3.11:28,0,3	0/0:18,0:19:32.84:0,33,288	1/1:2,12:15:28.39:190,28,0	1/1:4,16:21:46.39:329,46,0	0/0:7,1:15:16.31:0,16,211	0/0:11,1:13:32.71:0,33,285	0/0:11,1:11:2.13:0,2,183	0/0:12,1:14:7.97:0,8,225	0/1:4,15:21:22.35:165,0,22	0/0:23,0:23:28:0,28,307	0/0:14,0:14:24.03:0,24,229	0/0:29,0:27:56.69:0,57,518	1/1:5,13:19:22.85:159,23,0	1/1:2,18:21:40.76:288,41,0	1/1:3,13:18:33.87:228,34,0	0/0:13,0:14:13.96:0,14,276	0/0:15,0:15:27.03:0,27,254	0/0:23,2:26:19.97:0,20,438	0/1:3,9:12:14.36:67,0,14	1/1:4,13:16:32.76:241,33,0	1/1:4,13:17:26.79:197,27,0	0/0:25,0:25:44.99:0,45,417	0/1:19,2:21:2.52:3,0,327	0/0:38,1:34:60.32:0,60,528	0/0:14,1:15:17.11:0,17,310
chr10	56486089	.	G	GA	5542.62	PASS	AB=0.668;AC=17;AF=0.304;AN=56;BaseQRankSum=-12.845;DP=786;FS=21.495;HRun=10;HaplotypeScore=81.9004;InbreedingCoeff=0.7024;MQ=67.69;MQ0=0;MQRankSum=-0.247;QD=19.25;ReadPosRankSum=2.461;VQSLOD=3.9776;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:98.56:0,99,949	0/1:12,2:14:34.02:34,0,76	0/0:11,0:10:2.16:0,2,43	0/0:15,0:18:16.83:0,17,87	0/0:31,3:34:40.91:0,41,514	1/1:5,31:36:28.91:719,29,0	0/1:5,20:25:7.69:513,0,8	0/0:34,0:34:35.48:0,35,182	0/0:26,0:26:68.89:0,69,563	0/0:40,2:43:58.73:0,59,715	0/0:17,0:17:35.63:0,36,294	1/1:4,28:32:50.55:743,51,0	0/0:32,0:32:80.80:0,81,652	0/0:21,0:22:58.79:0,59,459	0/0:35,0:35:92.76:0,93,746	1/1:5,37:42:68.59:935,69,0	1/1:5,24:30:54.33:613,54,0	1/1:5,19:25:50.96:526,51,0	0/0:21,0:22:46.93:0,47,369	0/0:21,2:25:3.02:0,3,412	0/0:21,0:21:52.93:0,53,418	0/1:10,28:39:23.52:593,0,24	1/1:4,18:24:50.83:508,51,0	1/1:7,14:21:14.46:358,14,0	0/0:23,0:23:62.91:0,63,514	0/0:44,0:44:99:0,110,883	0/0:33,1:32:59.89:0,60,681	0/0:12,0:12:32.92:0,33,266
chr10	56488465	.	A	AT	10369.62	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-15.856;DP=623;FS=12.635;HRun=2;HaplotypeScore=59.8471;InbreedingCoeff=0.9990;MQ=82.40;MQ0=0;MQRankSum=-1.138;QD=38.98;ReadPosRankSum=-0.988;VQSLOD=3.9044;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,111,1363	1/1:0,11:11:27.09:389,27,0	0/0:16,0:17:43.31:0,43,457	0/0:16,0:17:27.83:0,28,466	0/0:14,0:14:39.12:0,39,483	0/0:30,0:30:87.27:0,87,1078	0/0:20,0:20:60.18:0,60,731	1/1:1,28:29:84.27:1192,84,0	1/1:0,12:12:33.11:475,33,0	1/1:0,19:19:54.18:776,54,0	1/1:0,12:12:33.11:475,33,0	0/0:36,0:36:99:0,102,1263	0/0:28,0:28:84.26:0,84,1040	0/0:26,0:26:78.25:0,78,967	1/1:1,39:40:99:1710,120,0	0/0:30,1:31:47.05:0,47,1023	0/0:38,0:38:99:0,114,1399	0/0:10,0:10:30.09:0,30,372	1/1:2,22:24:63.20:889,63,0	1/1:1,12:13:36.11:491,36,0	1/1:0,25:25:69.23:993,69,0	0/0:12,0:12:33.10:0,33,409	0/0:21,0:21:57.18:0,57,706	0/0:19,0:19:54.17:0,54,670	1/1:0,18:18:51.64:736,52,0	1/1:1,24:25:72.24:1036,72,0	1/1:3,25:28:63.21:907,63,0	1/1:0,10:10:21.07:302,21,0
chr10	56492680	.	G	GAAGA	25683.46	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-11.225;DP=698;FS=2.939;HRun=0;HaplotypeScore=95.1430;InbreedingCoeff=0.9850;MQ=72.60;MQ0=2;MQRankSum=-1.761;QD=46.53;ReadPosRankSum=-0.580;VQSLOD=4.8101;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:52.88:0,53,777	1/1:1,7:8:21.07:500,21,0	0/0:22,0:17:29.63:0,30,345	0/0:17,0:16:10.28:0,10,217	0/0:35,0:35:89.24:0,89,1275	1/1:13,11:24:51.09:1051,51,0	1/1:6,11:17:21.07:524,21,0	1/1:15,12:29:25.16:773,25,0	1/1:5,26:32:42.14:1049,42,0	1/1:5,22:29:72.17:1391,72,0	1/1:2,23:27:69.04:1426,69,0	1/1:14,12:28:27.30:1546,27,0	0/0:24,0:24:66.19:0,66,1039	0/0:23,0:23:63.18:0,63,1006	1/1:5,20:26:33.11:824,33,0	1/1:10,30:40:99:2601,108,0	1/1:13,16:28:63.12:1419,63,0	1/1:8,16:23:60.19:1398,60,0	1/1:4,18:23:60.07:1014,60,0	1/1:4,26:29:75.11:1616,75,0	1/1:4,12:18:27.09:674,27,0	1/1:3,19:22:50.98:1015,51,0	1/1:13,8:23:57.14:1179,57,0	1/1:12,19:32:78.23:1755,78,0	1/1:4,16:20:30.10:749,30,0	1/1:8,22:32:75.22:1696,75,0	1/1:3,22:26:45.15:1124,45,0	1/1:6,5:11:15.05:358,15,0
chr10	56492784	.	T	TC	7546.27	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-16.208;DP=687;FS=0.000;HRun=4;HaplotypeScore=69.3589;InbreedingCoeff=0.9902;MQ=58.28;MQ0=1;MQRankSum=2.555;QD=33.24;ReadPosRankSum=4.750;VQSLOD=5.1829;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,111,1239	0/0:8,0:8:24.05:0,24,256	0/0:12,0:12:27.05:0,27,288	0/0:9,0:8:15.03:0,15,159	0/0:32,0:32:81.14:0,81,866	1/1:3,26:29:75.11:973,75,0	1/1:2,19:21:54.18:734,54,0	0/0:40,0:40:99:0,102,1134	0/0:16,0:16:45.11:0,45,499	0/0:32,0:31:78.21:0,78,866	0/0:32,0:32:90.19:0,90,984	1/1:4,24:28:66.22:897,66,0	0/0:18,0:18:51.15:0,51,577	0/0:21,0:21:57.15:0,57,632	0/0:34,0:34:99:0,102,1131	1/1:2,30:32:84.28:1142,84,0	1/1:3,29:32:75.25:1018,75,0	1/1:2,24:26:57.63:848,58,0	0/0:28,0:27:78.18:0,78,851	0/0:21,0:21:60.15:0,60,670	0/0:15,0:15:36.07:0,36,387	1/1:3,9:12:10.47:387,10,0	1/1:1,22:23:54.18:733,54,0	1/1:2,22:24:60.20:815,60,0	0/0:32,0:31:87.24:0,87,978	0/0:29,0:29:66.16:0,66,723	0/0:27,0:26:69.18:0,69,767	0/0:15,0:15:45.12:0,45,499
chr10	56493595	.	A	AC	1671.45	PASS	AB=0.995;AC=29;AF=0.518;AN=56;BaseQRankSum=-0.961;DP=766;FS=2.619;HRun=0;HaplotypeScore=120.4997;InbreedingCoeff=0.1507;MQ=68.05;MQ0=12;MQRankSum=2.335;QD=3.06;ReadPosRankSum=-2.718;VQSLOD=3.0595;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:33:87.87:0,88,1058	1/1:5,0:5:2.65:24,3,0	0/0:47,0:16:26.48:0,26,269	0/0:42,0:22:0.74:0,1,194	0/0:29,0:29:76.91:0,77,911	1/1:37,0:35:2.42:47,2,0	0/1:18,0:18:4.79:121,0,5	1/1:31,2:33:29.04:257,29,0	0/1:19,0:19:4.34:4,0,33	0/1:28,0:28:0.09:178,0,0	1/1:30,0:30:7.95:94,8,0	0/1:26,0:26:22.88:57,0,23	0/0:25,0:24:66.14:0,66,779	0/0:19,0:19:53.59:0,54,602	1/1:39,3:42:1.50:229,2,0	1/1:35,0:35:1.81:153,2,0	0/1:25,0:25:3.67:32,0,4	0/1:24,0:23:3.24:42,0,3	0/1:28,0:28:53.14:54,0,53	1/1:25,0:25:8.77:89,9,0	0/0:6,0:6:1.48:0,1,2	1/1:18,0:18:4.71:34,5,0	0/1:29,1:30:19.02:94,0,19	0/1:21,0:21:5.77:10,0,6	0/1:42,0:42:10.97:87,0,11	1/1:22,0:22:17.05:137,17,0	0/1:38,1:39:56.50:93,0,56	0/0:17,0:17:15.81:0,16,43
chr10	56495655	.	TA	T	1796.05	PASS	AB=0.700;AC=37;AF=0.661;AN=56;BaseQRankSum=7.532;DP=524;FS=0.504;HRun=17;HaplotypeScore=58.7225;InbreedingCoeff=0.2101;MQ=56.90;MQ0=12;MQRankSum=-0.174;QD=4.09;ReadPosRankSum=4.335;VQSLOD=0.1278;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,2:30:24.01:0,24,346	1/1:2,5:9:15.73:78,16,0	0/0:15,0:3:0:0,0,0	0/0:8,0:4:5.83:0,6,38	0/1:21,2:23:13.72:14,0,175	1/1:9,1:26:14.62:86,15,0	1/1:2,1:7:11.06:40,11,0	0/1:16,16:32:26.44:144,0,26	1/1:4,7:11:17.52:100,18,0	0/1:12,7:20:53.08:91,0,53	0/1:6,10:17:11.12:108,0,11	1/1:8,0:26:26.34:75,26,0	0/0:17,0:18:25.99:0,26,219	0/0:12,0:11:17.93:0,18,139	0/1:15,13:31:1.22:170,0,1	1/1:7,2:20:27.01:102,27,0	1/1:5,1:18:23.17:74,23,0	0/1:4,1:18:12.50:49,0,13	0/1:16,1:22:37.36:37,0,67	0/1:10,12:23:34.78:119,0,35	1/1:5,3:8:8.76:50,9,0	1/1:2,0:6:5.55:15,6,0	1/1:6,0:14:18.98:62,19,0	1/1:1,0:13:16.28:46,16,0	1/1:10,15:26:23.84:217,24,0	0/1:15,6:23:22.52:57,0,23	1/1:12,16:28:19.87:196,20,0	1/1:9,2:12:7.68:39,8,0
chr10	56499667	.	GT	G	8305.06	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=14.569;DP=598;FS=2.776;HRun=1;HaplotypeScore=56.1986;InbreedingCoeff=0.9522;MQ=70.81;MQ0=0;MQRankSum=-2.151;QD=37.92;ReadPosRankSum=-0.042;VQSLOD=5.1757;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:90.31:0,90,1429	0/0:3,0:3:9.03:0,9,144	0/0:7,0:7:21.06:0,21,299	0/0:7,0:7:21.07:0,21,303	0/0:14,0:14:36.12:0,36,573	0/0:14,0:14:42.14:0,42,670	0/0:46,0:46:99:0,138,2192	0/0:25,0:25:72.23:0,72,1127	1/1:0,20:20:57.19:792,57,0	1/1:0,27:27:81.26:1113,81,0	1/1:0,3:3:6.02:82,6,0	0/0:44,0:44:99:0,132,2087	0/0:26,0:26:75.26:0,75,1191	0/0:27,0:27:81.25:0,81,1249	1/1:0,16:16:45.15:628,45,0	0/0:20,0:20:60.15:0,60,918	0/0:29,0:29:87.30:0,87,1384	0/0:40,0:40:99:0,117,1860	1/1:0,10:10:30.09:403,30,0	1/1:0,5:5:15.05:210,15,0	1/1:0,107:107:99:3840,277,0	0/0:5,0:5:15.05:0,15,239	0/0:7,0:7:18.06:0,18,284	0/0:34,0:34:99:0,102,1534	1/1:0,10:10:30.10:419,30,0	1/1:0,14:14:39.09:525,39,0	1/1:0,5:5:15.05:209,15,0	1/1:0,2:2:6.02:83,6,0
chr10	56505326	.	T	TA	7663.28	PASS	AB=0.632;AC=40;AF=0.714;AN=56;BaseQRankSum=-9.801;DP=491;FS=6.192;HRun=10;HaplotypeScore=50.7091;InbreedingCoeff=0.7832;MQ=65.74;MQ0=0;MQRankSum=-0.332;QD=21.47;ReadPosRankSum=0.613;VQSLOD=5.7180;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:33:72.43:0,72,575	1/1:2,10:12:29.99:304,30,0	0/0:9,0:6:13.99:0,14,101	0/0:14,0:9:2.25:0,2,64	0/0:23,0:23:41.91:0,42,345	1/1:3,19:22:48.08:499,48,0	0/1:5,4:9:9.57:113,0,10	0/1:8,24:32:0.06:578,0,0	1/1:4,5:9:15.04:160,15,0	1/1:5,18:23:51.13:541,51,0	1/1:5,16:21:25.94:446,26,0	1/1:4,7:11:21.05:224,21,0	0/0:18,0:18:44.92:0,45,364	0/0:13,0:13:29.95:0,30,246	1/1:2,14:15:5.43:263,5,0	1/1:1,17:18:45.06:467,45,0	0/0:23,0:23:62.84:0,63,505	1/1:7,17:23:45.11:480,45,0	1/1:10,15:25:28.04:453,28,0	1/1:2,18:20:51.04:517,51,0	1/1:1,5:6:9.02:96,9,0	1/1:0,5:5:14.91:143,15,0	1/1:1,2:3:6.02:64,6,0	1/1:2,7:8:18.05:192,18,0	1/1:0,20:20:51.13:544,51,0	1/1:5,25:30:41.51:639,42,0	1/1:3,26:28:59.88:639,60,0	1/1:3,9:13:29.91:302,30,0
chr10	56506577	.	AGAGAGAGAGAGG	A	1808.59	PASS	AB=0.980;AC=19;AF=0.352;AN=54;BaseQRankSum=-0.254;DP=616;FS=19.007;HRun=0;HaplotypeScore=187.4465;InbreedingCoeff=-0.1832;MQ=50.01;MQ0=42;MQRankSum=0.923;QD=4.66;ReadPosRankSum=-0.161;VQSLOD=1.2942;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:32:66.84:0,67,1095	0/0:9,0:7:5.97:0,6,144	./.	0/0:6,0:2:5.91:0,6,50	0/0:21,0:18:33.50:0,33,586	0/1:25,0:23:3.10:140,0,3	0/1:32,0:29:46.35:369,0,46	0/1:24,0:22:22.44:22,0,322	0/0:30,0:26:25.14:0,25,249	0/1:23,0:22:99:149,0,206	0/1:18,0:16:49.58:50,0,96	0/1:20,0:19:57.64:97,0,58	0/0:15,0:13:21.46:0,21,321	0/0:15,0:14:33.08:0,33,737	0/0:34,0:34:32.99:0,33,873	0/0:34,0:32:8.89:0,9,143	0/1:16,0:16:82.46:134,0,82	0/1:23,0:20:7.11:45,0,7	0/1:22,0:18:13.48:13,0,213	0/1:20,0:19:62.30:62,0,184	0/1:35,0:32:99:137,0,362	0/1:12,9:19:6.13:6,0,19	1/1:17,0:14:26.54:236,27,0	1/1:31,0:28:19.26:324,19,0	0/0:27,0:25:12.33:0,12,89	0/1:28,0:27:99:104,0,466	0/1:16,0:15:19.37:19,0,250	0/1:17,0:15:65.08:65,0,140
chr10	56506579	.	AGAGAGAGAGG	A	2872.47	PASS	AB=0.968;AC=27;AF=0.500;AN=54;BaseQRankSum=1.206;DP=614;FS=31.890;HRun=0;HaplotypeScore=167.8850;InbreedingCoeff=0.0095;MQ=50.37;MQ0=42;MQRankSum=2.230;QD=6.05;ReadPosRankSum=2.500;VQSLOD=0.6790;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:34:75.29:0,75,1015	0/0:9,0:7:5.99:0,6,119	./.	0/0:7,0:3:8.89:0,9,71	0/0:22,0:19:33.53:0,34,554	1/1:24,0:22:20.59:272,21,0	1/1:31,0:29:54.65:589,55,0	0/1:22,0:20:22.96:23,0,242	0/1:29,0:25:15.73:16,0,39	0/1:22,0:21:52.24:216,0,52	0/1:17,0:15:35.87:56,0,36	1/1:8,14:21:8:247,8,0	0/0:15,0:13:21.46:0,21,250	0/0:15,0:14:32.46:0,32,609	0/0:33,0:33:29.87:0,30,568	0/1:36,0:34:24.24:39,0,24	1/1:16,0:16:20.21:280,20,0	0/1:7,16:20:2.97:91,0,3	0/1:21,0:17:46.27:46,0,113	0/1:21,0:20:81.68:82,0,82	0/1:34,0:31:99:231,0,104	1/1:19,0:17:2.92:56,3,0	1/1:17,0:14:10.73:155,11,0	1/1:32,0:29:33.42:296,33,0	0/1:27,0:25:7.90:8,0,17	0/1:30,0:29:99:236,0,123	0/1:15,0:14:33.83:34,0,162	0/1:16,0:14:33.92:76,0,34
chr10	56506581	.	AGAGAGAGG	A	2842.51	PASS	AB=0.996;AC=30;AF=0.556;AN=54;BaseQRankSum=2.088;DP=604;FS=29.911;HRun=0;HaplotypeScore=147.6531;InbreedingCoeff=0.1821;MQ=50.18;MQ0=45;MQRankSum=3.269;QD=6.21;ReadPosRankSum=3.229;VQSLOD=1.2509;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:36:65.17:0,65,744	0/0:8,0:6:3.48:0,3,81	./.	0/0:10,0:4:11.89:0,12,98	0/0:23,0:20:36.47:0,36,420	1/1:22,0:20:21.04:208,21,0	1/1:31,0:28:48.63:455,49,0	0/1:21,0:19:23.42:23,0,132	0/1:29,0:25:17.30:54,0,17	0/1:21,0:20:4.45:322,0,4	0/1:17,0:15:6.89:66,0,7	1/1:22,0:21:8.55:150,9,0	0/0:14,0:12:15:0,15,182	0/0:17,0:16:38.48:0,38,539	0/0:34,0:34:29.26:0,29,333	1/1:14,22:34:4.70:97,5,0	1/1:16,0:16:20.67:195,21,0	1/1:21,0:18:0.62:61,1,0	0/1:22,1:16:1.87:97,0,2	0/1:21,0:20:39.86:112,0,40	0/1:33,0:30:8.08:268,0,8	1/1:17,0:15:2.57:24,3,0	1/1:17,0:14:20.77:170,21,0	1/1:24,0:21:31.35:266,31,0	1/1:26,0:24:3.89:35,4,0	0/1:29,0:28:86.33:252,0,86	0/1:16,0:15:55.37:88,0,55	0/1:16,0:14:19.84:76,0,20
chr10	56506583	.	AGAGAGG	A	4243.33	PASS	AB=1.000;AC=38;AF=0.704;AN=54;BaseQRankSum=1.593;DP=587;FS=2.616;HRun=0;HaplotypeScore=124.9430;InbreedingCoeff=0.5389;MQ=49.96;MQ0=45;MQRankSum=2.926;QD=8.93;ReadPosRankSum=1.466;VQSLOD=3.7943;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:35:63.21:0,63,642	0/0:8,0:6:3.48:0,3,61	./.	0/0:10,0:4:11.89:0,12,98	0/0:22,0:19:36.48:0,36,407	1/1:22,0:20:24.42:237,24,0	1/1:29,0:26:45.70:449,46,0	0/1:23,0:21:61.76:83,0,62	1/1:14,14:24:17.86:257,18,0	1/1:6,15:20:40.57:448,41,0	1/1:5,11:14:16.92:142,17,0	1/1:19,0:18:8.08:144,8,0	0/0:15,0:13:15.01:0,15,154	0/0:17,0:16:32.47:0,32,423	0/1:35,0:34:1.67:2,0,55	1/1:31,0:29:4.84:109,5,0	1/1:14,0:14:17.83:167,18,0	1/1:21,0:18:1.86:49,2,0	0/1:22,0:15:24.53:91,0,25	1/1:21,0:20:12.36:105,12,0	1/1:33,0:30:59.27:571,59,0	1/1:17,0:15:2.59:29,3,0	1/1:15,0:12:20.63:160,21,0	1/1:23,0:20:25.97:249,26,0	1/1:9,17:24:6.02:102,6,0	1/1:30,0:29:56.21:546,56,0	0/1:15,0:14:20.28:156,0,20	1/1:14,0:13:19.95:149,20,0
chr10	56506587	.	AGG	A	3771.55	PASS	AB=0.889;AC=39;AF=0.722;AN=54;BaseQRankSum=2.328;DP=558;FS=4.931;HRun=3;HaplotypeScore=93.4964;InbreedingCoeff=0.5645;MQ=50.18;MQ0=46;MQRankSum=1.155;QD=8.34;ReadPosRankSum=0.578;VQSLOD=0.2442;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,1:33:10.10:0,10,442	0/0:8,0:6:2.75:0,3,15	./.	0/0:10,0:4:11.89:0,12,98	0/0:22,0:19:30.42:0,30,258	1/1:23,0:21:30.59:254,31,0	1/1:29,0:26:26.88:377,27,0	1/1:22,0:20:21.59:150,22,0	1/1:26,0:22:13.72:61,14,0	1/1:21,0:20:50.40:410,50,0	1/1:16,0:14:15.27:102,15,0	1/1:19,0:18:8.63:74,9,0	0/0:12,0:9:14.59:0,15,130	0/0:16,0:15:30.91:0,31,326	1/1:7,29:35:30.40:414,30,0	1/1:29,0:27:4.91:36,5,0	1/1:15,0:14:2.15:122,2,0	1/1:21,0:18:3.81:26,4,0	0/1:21,0:14:11.13:66,0,11	0/1:8,8:15:11.13:112,0,11	1/1:29,0:26:55.32:408,55,0	1/1:18,0:16:6.93:52,7,0	1/1:14,0:11:20.67:158,21,0	1/1:22,0:20:11.55:236,12,0	1/1:24,0:22:4.81:29,5,0	1/1:25,0:24:47.24:408,47,0	0/1:11,0:10:8.13:108,0,8	1/1:15,0:14:20.82:169,21,0
chr10	56511089	.	GTC	G	12130.19	PASS	AB=0.803;AC=45;AF=0.804;AN=56;BaseQRankSum=9.805;DP=869;FS=1.703;HRun=0;HaplotypeScore=120.8582;InbreedingCoeff=0.6913;MQ=66.96;MQ0=14;MQRankSum=2.557;QD=18.41;ReadPosRankSum=2.068;VQSLOD=4.7261;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:56:99:0,112,1920	0/1:3,0:13:1.49:40,0,1	0/0:58,0:29:20.74:0,21,291	0/0:59,0:26:24.02:0,24,297	0/1:26,2:28:10.35:10,0,798	1/1:9,19:27:48.15:572,48,0	1/1:8,16:24:39.12:465,39,0	1/1:15,0:40:33.73:231,34,0	1/1:6,23:29:60.18:715,60,0	1/1:9,25:36:71:888,71,0	1/1:1,13:15:18.05:215,18,0	1/1:10,25:35:66.20:787,66,0	0/0:34,3:37:9.73:0,10,1094	0/1:18,2:20:23.16:23,0,616	1/1:12,21:33:62.86:708,63,0	1/1:6,14:22:44.80:493,45,0	1/1:6,18:24:42.13:501,42,0	1/1:8,23:33:62.76:705,63,0	1/1:10,13:22:33.04:349,33,0	1/1:9,14:23:42.13:501,42,0	1/1:18,34:54:80.34:983,80,0	1/1:3,23:26:54.17:644,54,0	1/1:5,7:14:14.35:134,14,0	1/1:8,25:33:45.58:742,46,0	1/1:3,15:19:39.12:465,39,0	1/1:10,26:37:48.88:899,49,0	1/1:4,13:18:42.12:490,42,0	1/1:13,16:28:48.14:572,48,0
chr10	56511427	.	T	TGTC	1618.04	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-8.346;DP=857;FS=0.594;HRun=0;HaplotypeScore=119.5938;InbreedingCoeff=0.9947;MQ=72.62;MQ0=0;MQRankSum=2.965;QD=28.89;ReadPosRankSum=-4.413;VQSLOD=2.9900;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,108,1510	1/1:3,8:12:24:457,24,0	0/0:31,0:26:64.93:0,65,744	0/0:33,0:29:56.81:0,57,811	0/0:34,0:34:75.19:0,75,1028	0/0:33,0:33:90.20:0,90,1232	0/0:24,0:24:57.18:0,57,839	1/1:13,30:44:93.51:1282,94,0	0/0:31,0:31:78.22:0,78,1098	0/0:40,0:40:87.28:0,87,1276	0/0:17,0:17:48.14:0,48,684	0/0:32,0:32:78.10:0,78,958	0/0:31,0:31:84.26:0,84,1208	0/0:20,0:20:51.12:0,51,674	0/0:51,0:51:99:0,126,1788	0/0:32,0:32:75.19:0,75,993	0/0:39,0:39:99:0,111,1517	0/0:33,0:33:81.15:0,81,1084	0/0:34,0:34:75.12:0,75,852	0/0:24,0:24:63.18:0,63,890	0/0:27,0:27:66.16:0,66,878	0/0:25,0:25:57.17:0,57,802	0/0:16,0:16:36.05:0,36,459	0/0:34,0:34:81.15:0,81,1072	0/0:25,0:25:69.11:0,69,926	0/0:44,0:44:99:0,108,1482	0/0:35,0:34:78.21:0,78,1105	0/0:9,0:9:18.05:0,18,251
chr10	56511817	.	TCACACACA	T	790.74	PASS	AB=0.910;AC=26;AF=0.542;AN=48;BaseQRankSum=3.460;DP=678;FS=8.742;HRun=0;HaplotypeScore=174.2148;InbreedingCoeff=0.0393;MQ=62.81;MQ0=17;MQRankSum=-2.315;QD=2.00;ReadPosRankSum=1.160;VQSLOD=2.1469;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:24:0.58:1,0,183	1/1:11,0:11:3.48:57,3,0	./.	./.	0/0:14,0:14:21.04:0,21,292	1/1:13,0:13:2.97:20,3,0	0/1:18,0:25:0.99:1,0,119	./.	1/1:17,8:26:8.67:202,9,0	0/0:29,0:28:1.82:0,2,5	1/1:8,0:9:2.08:6,2,0	0/1:18,7:25:0:0,0,0	0/0:36,0:36:42.14:0,42,1192	0/0:34,0:32:33.11:0,33,924	1/1:15,1:16:3.08:86,3,0	1/1:17,0:24:6.02:112,6,0	0/1:22,0:22:21.18:50,0,21	0/1:26,0:28:45.57:46,0,86	0/1:14,2:14:10.29:68,0,10	0/1:15,1:17:51.33:65,0,51	1/1:51,0:51:3.04:39,3,0	0/1:19,1:20:13.85:75,0,14	0/0:12,0:12:2.92:0,3,17	0/1:32,1:33:14:14,0,37	./.	0/1:24,0:24:15.24:15,0,74	0/0:12,0:12:2.97:0,3,20	1/1:4,1:5:2.91:74,3,0
chr10	56511954	.	GCACACA	G	6821.15	PASS	AB=0.733;AC=41;AF=0.732;AN=56;BaseQRankSum=3.979;DP=787;FS=1.176;HRun=0;HaplotypeScore=202.6691;InbreedingCoeff=0.5774;MQ=57.40;MQ0=13;MQRankSum=-4.404;QD=11.33;ReadPosRankSum=2.171;VQSLOD=4.0120;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,1:41:48.16:0,48,740	1/1:2,4:7:12.01:187,12,0	0/0:30,0:16:9.03:0,9,207	0/0:30,0:17:3.01:0,3,46	0/0:9,0:17:23.25:0,23,352	1/1:4,14:21:18.45:291,18,0	1/1:18,11:32:21.03:372,21,0	0/1:24,4:26:31.77:71,0,32	1/1:19,15:36:34.79:557,35,0	1/1:16,15:33:46.95:606,47,0	1/1:13,0:15:3.95:62,4,0	1/1:17,25:45:56.99:921,57,0	0/0:30,0:31:39:0,39,837	0/0:31,0:33:50.39:0,50,1080	1/1:10,20:32:38.30:620,38,0	1/1:18,17:39:29.55:474,30,0	1/1:18,5:23:23.60:358,24,0	0/1:19,8:29:99:186,0,122	1/1:12,6:18:3.51:122,4,0	1/1:11,5:16:12.93:172,13,0	1/1:66,2:74:28.03:343,28,0	1/1:14,5:19:15.29:139,15,0	1/1:9,14:24:3.16:33,3,0	1/1:29,3:33:15.14:224,15,0	0/1:6,12:22:19.24:227,0,19	1/1:15,15:31:30.09:548,30,0	1/1:12,6:19:11.97:184,12,0	1/1:3,0:3:6.02:124,6,0
chr10	56513090	.	A	ACT	818.78	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-6.240;DP=472;FS=0.937;HRun=0;HaplotypeScore=57.6832;InbreedingCoeff=0.9623;MQ=76.76;MQ0=0;MQRankSum=-0.143;QD=38.99;ReadPosRankSum=-2.373;VQSLOD=4.3932;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:69.23:0,69,988	1/1:1,4:7:12.04:220,12,0	0/0:9,0:9:27.09:0,27,383	0/0:13,0:13:29.77:0,30,383	0/0:11,0:11:33.09:0,33,451	0/0:15,0:15:45.15:0,45,633	0/0:23,0:23:69.21:0,69,970	1/1:1,13:14:39.13:715,39,0	0/0:20,0:20:57.19:0,57,817	0/0:14,0:14:36.12:0,36,516	0/0:8,0:8:21.07:0,21,294	0/0:25,0:25:75.24:0,75,1057	0/0:12,0:12:36.12:0,36,516	0/0:20,0:20:60.20:0,60,860	0/0:14,0:14:39.13:0,39,558	0/0:17,0:17:48.16:0,48,688	0/0:33,0:33:96.29:0,96,1338	0/0:31,0:31:87.29:0,87,1247	0/0:16,0:16:48.16:0,48,684	0/0:12,0:12:36.11:0,36,498	0/0:52,0:52:99:0,126,1784	0/0:7,0:7:21.07:0,21,301	0/0:11,0:11:30.10:0,30,426	0/0:20,0:20:54.18:0,54,773	0/0:16,0:16:45.15:0,45,644	0/0:12,0:12:36.11:0,36,500	0/0:9,0:9:27.09:0,27,387	0/0:4,0:4:12.04:0,12,172
chr10	56513891	.	G	GA	804.92	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=-6.848;DP=506;FS=0.694;HRun=8;HaplotypeScore=51.3247;InbreedingCoeff=0.7909;MQ=75.30;MQ0=1;MQRankSum=2.537;QD=14.63;ReadPosRankSum=-4.690;VQSLOD=2.2638;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,126,1132	1/1:3,4:7:12.04:138,12,0	0/0:14,0:10:5.08:0,5,60	0/1:16,0:14:1.02:1,0,23	0/0:23,0:23:65.97:0,66,583	0/0:22,0:22:56.87:0,57,508	0/0:19,0:19:45.01:0,45,407	1/1:9,23:32:69.17:782,69,0	0/0:21,0:21:56.99:0,57,512	0/0:16,0:16:45:0,45,403	0/0:14,0:14:35.98:0,36,317	0/0:11,0:11:30:0,30,269	0/0:12,0:12:24:0,24,215	0/0:4,0:4:12.01:0,12,110	0/0:11,0:11:29.99:0,30,265	0/0:18,0:18:50.23:0,50,440	0/0:27,0:27:78:0,78,703	0/0:19,0:19:47.94:0,48,420	0/0:18,0:18:47.94:0,48,421	0/0:23,0:23:63.01:0,63,567	0/0:13,0:13:32.98:0,33,292	0/0:15,0:15:42.02:0,42,384	0/0:16,0:16:42.89:0,43,382	0/0:22,0:22:54.01:0,54,489	0/0:20,0:20:49.24:0,49,438	0/0:18,1:19:40.71:0,41,405	0/0:13,0:13:36.02:0,36,329	0/0:13,0:13:38.98:0,39,346
chr10	56514610	.	G	GAA	11392.17	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-7.366;DP=544;FS=11.430;HRun=11;HaplotypeScore=71.8399;InbreedingCoeff=0.9878;MQ=72.28;MQ0=1;MQRankSum=-0.786;QD=28.06;ReadPosRankSum=2.004;VQSLOD=4.2833;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:28:70.60:0,71,651	1/1:1,8:10:27.09:375,27,0	0/0:24,0:22:33.35:0,33,281	0/0:16,0:14:18.06:0,18,136	0/0:32,0:33:71.94:0,72,735	1/1:2,18:22:53.15:712,53,0	1/1:2,7:11:23.56:283,24,0	1/1:7,16:24:50.23:630,50,0	1/1:1,11:12:14.84:217,15,0	1/1:5,15:22:47.61:620,48,0	1/1:2,21:25:63.56:822,64,0	1/1:1,13:14:27.09:390,27,0	0/0:19,0:20:44.95:0,45,475	0/0:15,0:15:19.02:0,19,348	1/1:0,9:12:23.05:278,23,0	1/1:0,18:21:51.16:694,51,0	1/1:2,19:21:50.65:689,51,0	1/1:2,9:14:33.10:433,33,0	1/1:12,12:27:48.87:512,49,0	1/1:3,22:30:80.49:1008,80,0	1/1:5,11:17:18.05:231,18,0	1/1:0,7:8:20.51:245,21,0	1/1:3,13:19:36.11:483,36,0	1/1:0,8:8:18.06:260,18,0	1/1:0,20:21:50.66:704,51,0	1/1:5,21:30:73.18:883,73,0	1/1:4,14:20:28.90:365,29,0	1/1:1,11:17:44.62:557,45,0
chr10	56514881	.	A	AT	8437.90	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-10.499;DP=442;FS=13.515;HRun=10;HaplotypeScore=44.8018;InbreedingCoeff=0.9035;MQ=75.35;MQ0=0;MQRankSum=-0.879;QD=25.57;ReadPosRankSum=1.935;VQSLOD=4.0592;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:81.73:0,82,647	1/1:1,9:10:27.07:288,27,0	0/0:19,0:16:21.55:0,22,153	0/0:9,0:7:2.30:0,2,44	0/0:19,0:19:41.89:0,42,345	1/1:2,17:19:48.12:512,48,0	1/1:2,9:11:24.06:256,24,0	1/1:7,24:31:71.82:731,72,0	1/1:0,11:11:33.08:352,33,0	1/1:2,20:22:60.14:632,60,0	1/1:3,11:14:11.45:327,11,0	1/1:4,10:14:27.07:288,27,0	0/0:17,0:17:44.91:0,45,366	0/0:16,0:16:44.92:0,45,364	1/1:2,12:14:8.61:295,9,0	1/1:0,11:11:30.08:320,30,0	1/1:3,20:23:54.14:576,54,0	1/1:1,19:20:48.01:512,48,0	1/1:6,15:20:45.09:471,45,0	1/1:4,9:13:27.07:288,27,0	1/1:0,8:8:15.04:160,15,0	1/1:1,1:2:3.48:33,3,0	1/1:0,13:13:32.98:339,33,0	1/1:0,14:14:39.10:416,39,0	1/1:0,12:12:33.08:352,33,0	1/1:1,11:12:30.08:320,30,0	1/1:1,14:15:42.11:448,42,0	1/1:4,16:20:51.07:523,51,0
chr10	56517335	.	C	CT	569.22	PASS	AB=0.929;AC=6;AF=0.107;AN=56;BaseQRankSum=-4.800;DP=602;FS=5.874;HRun=11;HaplotypeScore=67.0707;InbreedingCoeff=0.7299;MQ=58.03;MQ0=13;MQRankSum=-1.108;QD=9.99;ReadPosRankSum=-3.013;VQSLOD=2.1227;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:35:79.69:0,80,609	1/1:2,7:9:21.04:213,21,0	0/0:11,0:3:8.95:0,9,67	0/1:10,0:1:0:0,0,0	0/0:26,0:26:58.29:0,58,439	0/0:16,0:16:32.85:0,33,255	0/1:10,2:12:33.98:34,0,133	1/1:8,18:23:27.82:450,28,0	0/0:11,1:14:36.94:0,37,266	0/0:21,0:22:52.81:0,53,400	0/0:23,0:23:56.37:0,56,428	0/0:23,0:24:58.73:0,59,438	0/0:12,1:13:29.80:0,30,223	0/0:16,0:19:44.95:0,45,319	0/0:22,1:24:22.37:0,22,345	0/0:33,0:33:73.02:0,73,662	0/0:34,1:36:53.51:0,54,582	0/0:19,0:19:44.80:0,45,348	0/0:24,1:25:22.31:0,22,342	0/0:14,0:16:34.89:0,35,259	0/0:17,0:19:39.84:0,40,283	0/0:13,0:14:28.41:0,28,212	0/0:29,0:30:55.65:0,56,420	0/0:23,2:27:54.85:0,55,406	0/0:15,0:15:38.80:0,39,297	0/0:29,1:32:44.54:0,45,491	0/0:31,0:33:89.76:0,90,665	0/0:16,0:15:29.83:0,30,229
chr10	56518169	.	TTC	T	717.45	PASS	AB=0.979;AC=23;AF=0.411;AN=56;BaseQRankSum=10.715;DP=645;FS=3.047;HRun=0;HaplotypeScore=83.2621;InbreedingCoeff=-0.1642;MQ=59.93;MQ0=25;MQRankSum=0.497;QD=1.90;ReadPosRankSum=9.551;VQSLOD=0.3260;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,102,1459	0/0:8,0:8:21.04:0,21,279	0/0:73,0:16:4.18:0,4,114	0/0:69,0:18:26.50:0,27,252	0/0:20,0:20:60.09:0,60,814	0/1:24,0:23:33.52:59,0,34	0/1:18,0:18:1.37:1,0,42	0/0:23,0:23:60.01:0,60,940	0/1:21,0:20:15.44:22,0,15	0/1:23,0:23:50.07:50,0,54	0/1:15,0:15:20.39:20,0,29	0/0:11,0:11:6.05:0,6,71	0/0:15,0:15:39.08:0,39,556	0/0:10,0:10:30.06:0,30,458	1/1:8,0:8:1.77:4,2,0	0/1:16,0:16:20.26:41,0,20	0/1:35,1:36:43.88:44,0,54	1/1:23,2:25:14.74:101,15,0	0/1:27,0:27:66.28:66,0,138	0/1:30,0:30:41.63:42,0,143	1/1:6,0:6:1.74:4,2,0	0/1:13,2:15:24.31:71,0,24	0/1:13,0:13:2.47:2,0,17	0/1:18,2:20:40.44:81,0,40	0/1:16,0:15:20.04:20,0,21	0/1:18,1:19:71.05:132,0,71	0/1:27,1:27:27.25:46,0,27	1/1:18,0:18:12.48:72,12,0
chr10	56518170	.	TC	T	6154.71	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=4.425;DP=635;FS=4.642;HRun=5;HaplotypeScore=56.2470;InbreedingCoeff=0.9116;MQ=59.88;MQ0=25;MQRankSum=1.399;QD=16.15;ReadPosRankSum=6.123;VQSLOD=3.8255;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:84.08:0,84,927	0/0:8,0:8:12.03:0,12,142	0/0:73,1:16:2.34:0,2,96	0/0:70,0:18:11.61:0,12,107	0/0:20,0:20:59.13:0,59,584	1/1:12,12:23:48.12:541,48,0	1/1:1,17:18:24.07:270,24,0	0/0:23,0:23:62.91:0,63,662	1/1:3,18:20:17.97:185,18,0	1/1:4,18:22:41.94:437,42,0	1/1:2,13:15:30.04:323,30,0	1/1:3,8:11:9.03:101,9,0	0/0:14,0:14:35.90:0,36,381	0/0:9,0:9:23.87:0,24,281	1/1:0,8:8:6.02:68,6,0	1/1:2,14:16:23.96:252,24,0	1/1:4,31:35:52.71:619,53,0	1/1:2,23:25:41.95:435,42,0	1/1:4,22:27:46.25:538,46,0	1/1:7,22:29:39.01:399,39,0	1/1:1,6:6:9.03:101,9,0	1/1:4,10:14:20.89:191,21,0	1/1:2,11:13:18.05:203,18,0	1/1:4,16:20:29.96:364,30,0	1/1:2,13:14:15.04:169,15,0	1/1:5,11:16:24.75:297,25,0	1/1:2,25:26:43.89:461,44,0	1/1:2,16:18:20.87:202,21,0
chr10	56521593	.	GCTCTCTCTCTCTCTCTCTCT	G	11807.54	PASS	AB=0.900;AC=17;AF=0.304;AN=56;BaseQRankSum=11.839;DP=697;FS=12.897;HRun=0;HaplotypeScore=329.9512;InbreedingCoeff=0.8934;MQ=70.60;MQ0=18;MQRankSum=-11.205;QD=59.33;ReadPosRankSum=5.712;VQSLOD=2.6931;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:33:72.25:0,72,5580	0/0:9,0:10:18.53:0,19,1310	0/0:43,0:21:9.03:0,9,248	0/0:49,0:22:9.03:0,9,152	0/0:21,0:25:42.14:0,42,2967	1/1:4,17:21:42.14:2243,42,0	0/1:16,2:18:0.01:341,0,0	0/0:50,0:49:75.24:0,75,4215	0/0:20,0:21:30.07:0,30,1707	0/0:26,0:27:57.20:0,57,3530	0/0:23,0:23:24.08:0,24,1230	1/1:12,12:26:40.69:2052,41,0	0/0:14,0:17:30.10:0,30,2275	0/0:18,0:24:36.12:0,36,2591	0/0:11,0:23:39.13:0,39,2847	1/1:11,14:26:39.13:2000,39,0	1/1:17,4:21:6.02:322,6,0	1/1:13,7:20:4.13:475,4,0	0/0:21,0:24:30.10:0,30,1452	0/0:20,0:20:33.10:0,33,2103	0/0:29,0:28:13.86:0,14,711	1/1:8,12:22:33.11:1606,33,0	1/1:8,9:19:30.10:1523,30,0	1/1:17,9:26:27.09:1244,27,0	0/0:13,0:20:39.12:0,39,2501	0/0:18,0:26:60.21:0,60,4373	0/0:11,0:17:21.07:0,21,1440	0/0:13,0:13:36.12:0,36,2296
chr10	56521637	.	C	CTTGT	866.74	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-1.035;DP=618;FS=2.003;HRun=0;HaplotypeScore=192.6446;InbreedingCoeff=0.9580;MQ=52.36;MQ0=11;MQRankSum=-3.079;QD=25.49;ReadPosRankSum=-4.770;VQSLOD=2.5990;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:33:72.15:0,72,1033	1/1:4,5:8:12.93:286,13,0	0/0:28,0:11:16.55:0,17,253	0/0:39,0:20:39.06:0,39,571	0/0:22,0:22:37.14:0,37,628	0/0:24,0:24:51.13:0,51,779	0/0:19,0:19:37.37:0,37,596	1/1:15,7:25:36.06:698,36,0	0/0:21,0:21:42.11:0,42,628	0/0:22,0:22:36.12:0,36,583	0/0:9,0:9:14.55:0,15,242	0/0:24,0:24:30.09:0,30,459	0/0:14,0:14:27.09:0,27,434	0/0:25,0:25:57.12:0,57,824	0/0:32,0:32:66.16:0,66,990	0/0:31,0:31:63.17:0,63,933	0/0:20,0:20:33.07:0,33,466	0/0:24,0:24:54.18:0,54,844	0/0:18,0:18:27.09:0,27,436	0/0:19,0:19:32.43:0,32,483	0/0:19,0:19:22.19:0,22,426	0/0:25,0:25:33.89:0,34,558	0/0:24,0:25:32.72:0,33,455	0/0:20,0:20:16.35:0,16,267	0/0:18,0:18:27.07:0,27,412	0/0:24,0:24:54.16:0,54,827	0/0:17,0:17:39.13:0,39,621	0/0:10,0:9:18.04:0,18,266
chr10	56523185	.	T	TGAAT	6751.69	PASS	AB=1.000;AC=18;AF=0.346;AN=52;BaseQRankSum=-4.615;DP=620;FS=8.836;HRun=0;HaplotypeScore=127.7903;InbreedingCoeff=0.7980;MQ=61.44;MQ0=11;MQRankSum=1.877;QD=29.10;ReadPosRankSum=-1.823;VQSLOD=4.1434;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:51.17:0,51,767	0/0:4,0:4:3.01:0,3,31	./.	./.	0/0:18,0:18:33.08:0,33,449	1/1:24,0:24:45.03:943,45,0	1/1:34,0:34:41.89:636,42,0	0/1:34,0:32:6.94:31,0,7	0/0:20,0:20:24.03:0,24,227	0/0:24,0:24:33:0,33,312	0/0:17,0:17:10.29:0,10,112	1/1:22,0:22:51.07:969,51,0	0/0:24,0:24:24.07:0,24,350	0/0:35,0:35:45.10:0,45,610	0/0:15,0:15:21.03:0,21,201	0/1:23,0:23:23.75:596,0,24	1/1:21,0:21:30.10:669,30,0	1/1:22,0:21:51.17:1165,51,0	0/0:23,0:20:21.03:0,21,202	0/0:18,0:18:21.03:0,21,198	0/0:33,0:33:45.07:0,45,430	1/1:13,0:13:18.05:340,18,0	1/1:14,0:14:27.56:573,28,0	1/1:20,4:25:36.12:829,36,0	0/0:25,0:25:21.03:0,21,199	0/0:26,0:25:36.06:0,36,346	0/0:29,0:29:23.97:0,24,227	0/0:7,0:7:9.01:0,9,87
chr10	56523193	.	TGAAA	T	7691	PASS	AB=0.996;AC=33;AF=0.589;AN=56;BaseQRankSum=-6.516;DP=616;FS=13.547;HRun=0;HaplotypeScore=124.4703;InbreedingCoeff=0.1790;MQ=64.56;MQ0=7;MQRankSum=3.270;QD=16.09;ReadPosRankSum=-2.634;VQSLOD=3.2474;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:91.16:0,91,1859	0/1:4,0:4:33.54:63,0,34	0/0:9,0:5:15:0,15,144	0/0:19,0:13:35.96:0,36,355	0/0:18,0:18:48.11:0,48,932	0/1:25,0:25:99:142,0,373	0/1:32,0:32:99:254,0,321	0/1:34,0:32:28.15:587,0,28	1/1:2,18:20:21.07:392,21,0	1/1:2,21:23:62.94:813,63,0	1/1:2,13:15:32.51:347,33,0	0/1:25,0:25:80.04:80,0,397	0/0:19,0:19:54.12:0,54,1027	0/0:35,0:35:99:0,99,1546	1/1:1,15:16:21.07:373,21,0	0/1:22,1:23:99:174,0,252	0/1:22,0:22:99:178,0,257	0/1:24,0:23:15.42:15,0,401	1/1:2,24:24:71.99:815,72,0	1/1:2,19:21:56.24:565,56,0	1/1:1,33:34:45.15:839,45,0	0/1:11,0:11:48.02:48,0,147	0/1:16,0:16:59.07:59,0,187	0/1:24,0:24:99:139,0,272	1/1:2,22:24:18.06:336,18,0	1/1:0,22:22:65.89:896,66,0	1/1:2,29:31:23.55:408,24,0	1/1:0,6:6:9.03:168,9,0
chr10	56523196	.	A	ATG	2338.91	PASS	AB=0.719;AC=9;AF=0.161;AN=56;BaseQRankSum=7.173;DP=609;FS=9.937;HRun=0;HaplotypeScore=124.0907;InbreedingCoeff=-0.1972;MQ=67.26;MQ0=4;MQRankSum=-3.457;QD=11.35;ReadPosRankSum=2.898;VQSLOD=3.0024;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,114,1808	0/0:4,0:4:11.82:0,12,76	0/0:9,0:7:18.53:0,19,287	0/0:17,0:13:36.01:0,36,535	0/0:17,0:17:51.17:0,51,800	0/1:14,11:25:99:380,0,136	0/1:24,7:31:99:137,0,245	0/0:32,0:32:71.21:0,71,499	0/0:19,0:19:23.12:0,23,130	0/0:22,0:22:64.38:0,64,401	0/0:13,0:13:32.50:0,32,243	0/1:17,11:28:97.24:385,0,97	0/0:19,0:19:57.19:0,57,918	0/0:36,0:36:99:0,108,1674	0/0:16,0:16:20.13:0,20,104	0/1:15,8:23:99:209,0,183	0/1:16,8:24:99:235,0,206	0/1:10,15:24:50.33:491,0,50	0/0:25,0:24:70.18:0,70,426	0/0:21,0:21:59.12:0,59,436	0/0:33,0:33:43.05:0,43,223	0/1:7,3:10:47.15:124,0,47	0/1:8,8:16:56.59:188,0,57	0/1:13,11:24:92.79:331,0,93	0/0:23,0:23:20.25:0,20,115	0/0:22,0:22:64.20:0,64,393	0/0:31,0:31:25.65:0,26,155	0/0:6,0:6:8.63:0,9,45
chr10	56523197	.	A	AAT	2417.63	PASS	AB=0.717;AC=9;AF=0.161;AN=56;BaseQRankSum=5.935;DP=611;FS=5.407;HRun=0;HaplotypeScore=123.9614;InbreedingCoeff=-0.2089;MQ=67.21;MQ0=4;MQRankSum=-2.687;QD=11.74;ReadPosRankSum=-0.624;VQSLOD=3.0893;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,114,1831	0/0:4,0:4:11.82:0,12,76	0/0:9,0:7:18.52:0,19,272	0/0:17,0:13:38.91:0,39,562	0/0:16,0:16:48.16:0,48,783	0/1:14,11:25:99:405,0,107	0/1:25,7:32:71.06:71,0,342	0/0:32,0:32:39.02:0,39,479	0/0:20,0:20:19.21:0,19,83	0/0:23,0:23:43.14:0,43,330	0/0:13,0:13:31.97:0,32,231	0/1:16,11:27:99:387,0,112	0/0:19,0:19:57.19:0,57,923	0/0:36,0:36:99:0,105,1658	0/0:18,0:18:19.21:0,19,84	0/1:16,8:24:99:258,0,143	0/1:16,8:24:99:280,0,168	0/1:10,15:24:32.48:514,0,32	0/0:27,0:26:18.48:0,18,318	0/0:19,0:19:1.52:0,2,281	0/0:33,0:33:41.10:0,41,178	0/1:6,3:9:50.12:102,0,50	0/1:8,8:16:37.73:209,0,38	0/1:13,11:24:92.74:331,0,93	0/0:22,0:22:16.47:0,16,71	0/0:22,0:22:62.64:0,63,357	0/0:30,0:30:21.74:0,22,109	0/0:6,0:6:8.23:0,8,36
chr10	56523902	.	GA	G	766.76	PASS	AB=0.770;AC=20;AF=0.385;AN=52;BaseQRankSum=-0.886;DP=405;FS=2.080;HRun=12;HaplotypeScore=75.7806;InbreedingCoeff=0.5402;MQ=46.56;MQ0=20;MQRankSum=-3.060;QD=4.28;ReadPosRankSum=0.959;VQSLOD=1.3714;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:48.77:0,49,590	1/1:1,3:4:5.97:46,6,0	./.	./.	0/0:25,0:25:41.32:0,41,375	1/1:2,7:8:11.95:93,12,0	0/1:12,4:15:7.89:37,0,8	0/1:7,5:9:15.61:67,0,16	0/0:11,0:11:10.45:0,10,65	0/0:14,0:13:2.58:0,3,118	0/0:18,0:16:7.81:0,8,71	1/1:12,6:16:12.43:142,12,0	0/0:14,0:13:11.95:0,12,94	0/0:13,0:12:6:0,6,56	0/0:11,0:11:8.89:0,9,61	1/1:3,2:5:8.87:69,9,0	1/1:21,16:34:1.79:99,2,0	1/1:9,5:11:12.27:88,12,0	0/1:13,1:11:4.52:5,0,85	0/0:23,0:21:26.81:0,27,203	0/0:8,0:7:8.76:0,9,51	1/1:10,4:15:5.81:128,6,0	1/1:10,5:14:16.75:112,17,0	0/1:8,8:15:0.81:56,0,1	0/0:11,0:10:14.76:0,15,96	0/0:19,0:18:17.83:0,18,127	0/0:13,0:12:14.21:0,14,102	0/0:8,0:4:2.78:0,3,19
chr10	56524039	.	GA	G	4446.91	PASS	AB=0.728;AC=43;AF=0.768;AN=56;BaseQRankSum=3.273;DP=483;FS=2.913;HRun=13;HaplotypeScore=57.0463;InbreedingCoeff=0.4596;MQ=68.59;MQ0=4;MQRankSum=-0.961;QD=11.12;ReadPosRankSum=2.994;VQSLOD=4.6106;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,1:37:57.06:0,57,688	0/1:2,4:6:20.23:35,0,20	0/1:29,0:15:1.94:2,0,97	0/0:12,0:8:4.71:0,5,46	0/0:24,0:23:48.02:0,48,450	1/1:3,14:18:17.60:283,18,0	1/1:2,14:17:43.80:312,44,0	1/1:9,15:24:38.68:281,39,0	1/1:1,10:12:25.88:181,26,0	1/1:5,8:14:25.86:181,26,0	1/1:7,4:11:4.91:78,5,0	1/1:3,15:18:32.79:240,33,0	0/0:9,0:9:13.30:0,13,143	0/1:14,3:17:7.76:8,0,256	1/1:6,15:21:12.64:255,13,0	1/1:5,8:12:17.88:131,18,0	1/1:2,18:21:37.82:268,38,0	1/1:4,17:21:30.12:292,30,0	1/1:3,16:19:47.58:337,48,0	0/1:5,10:15:16.92:183,0,17	0/1:7,16:23:22.59:183,0,23	1/1:6,2:8:5.93:44,6,0	1/1:3,11:14:3.64:190,4,0	1/1:5,21:26:47.71:350,48,0	1/1:3,13:18:33.88:231,34,0	1/1:5,7:12:20.83:151,21,0	1/1:3,8:12:14.28:166,14,0	1/1:5,5:10:8.91:66,9,0
chr10	56524946	.	T	TTATC	4064.02	PASS	AB=0.907;AC=25;AF=0.521;AN=48;BaseQRankSum=-7.590;DP=423;FS=8.307;HRun=0;HaplotypeScore=74.4946;InbreedingCoeff=0.5038;MQ=67.99;MQ0=5;MQRankSum=-0.332;QD=16.00;ReadPosRankSum=-1.313;VQSLOD=1.8090;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:21:12.01:0,12,112	./.	./.	./.	0/1:8,0:13:0:0,0,0	0/0:13,0:22:21.02:0,21,192	0/0:6,0:11:6.01:0,6,56	./.	1/1:4,9:13:21.07:487,21,0	1/1:8,7:16:24.08:491,24,0	1/1:14,4:18:24.05:439,24,0	0/0:3,0:9:12.01:0,12,112	0/0:14,0:14:24.07:0,24,344	0/0:11,0:11:27.09:0,27,400	1/1:2,1:10:3.01:52,3,0	0/1:9,0:16:81.70:82,0,135	0/1:14,0:19:7.29:7,0,63	0/1:12,0:19:36.93:37,0,94	1/1:19,3:21:9.03:208,9,0	1/1:9,6:15:18.06:418,18,0	1/1:17,0:17:9:108,9,0	0/0:0,0:2:5.97:0,6,48	0/0:6,0:8:6.01:0,6,56	0/0:5,0:10:9.01:0,9,84	1/1:7,3:9:3.01:70,3,0	1/1:12,7:19:21.07:488,21,0	1/1:8,15:23:36.12:808,36,0	0/1:16,6:19:21.57:371,0,22
chr10	56525110	.	T	TATAC	19970.50	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-12.908;DP=604;FS=5.630;HRun=0;HaplotypeScore=90.1492;InbreedingCoeff=0.9662;MQ=69.46;MQ0=1;MQRankSum=-4.039;QD=42.49;ReadPosRankSum=3.696;VQSLOD=5.2317;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:57.20:0,57,991	1/1:1,7:8:15.05:381,15,0	0/0:27,0:25:43.48:0,43,852	0/0:17,0:13:23.81:0,24,309	0/0:32,0:32:87.25:0,87,1425	1/1:2,26:29:39.13:989,39,0	1/1:2,14:17:21.05:533,21,0	1/1:5,25:31:81.22:1618,81,0	1/1:2,22:27:39.13:982,39,0	1/1:3,31:34:87.30:2093,87,0	1/1:2,16:20:24.08:610,24,0	1/1:0,11:11:18.06:457,18,0	0/0:18,0:18:39.12:0,39,641	0/0:11,0:11:33.11:0,33,569	1/1:1,12:15:24.08:608,24,0	1/1:2,15:18:27.09:686,27,0	1/1:6,20:27:42.10:1010,42,0	1/1:6,16:22:8.12:656,8,0	1/1:7,8:15:27.07:555,27,0	1/1:2,19:22:36.12:914,36,0	1/1:2,11:15:30.06:706,30,0	1/1:1,17:19:38.29:989,38,0	1/1:1,20:21:30.10:761,30,0	1/1:0,8:8:8.86:228,9,0	1/1:4,27:31:39.13:990,39,0	1/1:0,27:27:81.28:1998,81,0	1/1:5,28:33:63.22:1599,63,0	1/1:4,14:18:24.08:609,24,0
chr10	56528106	.	CTGTT	C	1939.92	PASS	AB=0.746;AC=34;AF=0.680;AN=50;BaseQRankSum=6.213;DP=584;FS=4.344;HRun=0;HaplotypeScore=42.4446;InbreedingCoeff=0.5493;MQ=29.39;MQ0=159;MQRankSum=-0.410;QD=5.99;ReadPosRankSum=-3.307;VQSLOD=0.3610;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:32:81.23:0,81,1838	./.	0/0:23,0:8:24.07:0,24,515	0/0:24,0:7:21.07:0,21,461	0/0:36,0:31:52.42:0,52,1166	1/1:25,9:9:9.03:146,9,0	./.	0/0:35,0:11:2.90:0,3,60	1/1:6,9:8:12.04:195,12,0	1/1:11,7:7:9:112,9,0	1/1:5,8:8:3.01:49,3,0	1/1:11,3:3:2.98:21,3,0	0/0:31,0:18:42.08:0,42,958	0/0:30,0:16:39.13:0,39,933	1/1:9,16:5:9.03:146,9,0	1/1:11,11:9:18.06:293,18,0	1/1:3,8:5:9.03:146,9,0	1/1:15,3:4:6.02:98,6,0	1/1:11,4:8:11.96:138,12,0	1/1:11,9:15:2.84:20,3,0	1/1:3,4:2:3.01:48,3,0	1/1:14,7:8:3.01:49,3,0	1/1:9,9:9:9.03:146,9,0	0/1:15,4:4:85.59:86,0,92	1/1:2,7:3:3.01:49,3,0	0/1:7,7:5:36.92:80,0,37	1/1:15,16:18:18.06:293,18,0	./.
chr10	56528360	.	TACAG	T	1829.09	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.276;DP=654;FS=3.044;HRun=0;HaplotypeScore=104.4801;InbreedingCoeff=0.9661;MQ=81.04;MQ0=0;MQRankSum=-8.369;QD=44.61;ReadPosRankSum=-3.168;VQSLOD=2.9787;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,135,3433	1/1:0,7:4:9.03:170,9,0	0/0:23,0:23:50.70:0,51,1144	0/0:28,0:28:71.43:0,71,1892	0/0:20,0:20:51.18:0,51,1337	0/0:31,0:31:87.30:0,87,2316	0/0:26,0:26:78.25:0,78,2007	1/1:2,32:34:96.32:1773,96,0	0/0:30,0:30:87.28:0,87,2227	0/0:26,0:25:72.24:0,72,1879	0/0:25,0:24:60.21:0,60,1594	0/0:20,0:20:60.21:0,60,1602	0/0:20,0:20:57.17:0,57,1379	0/0:16,0:16:45.14:0,45,1148	0/0:22,0:22:66.23:0,66,1718	0/0:21,0:21:63.19:0,63,1598	0/0:29,0:28:81.28:0,81,2124	0/0:23,0:22:63.22:0,63,1660	0/0:23,0:23:63.20:0,63,1522	0/0:25,0:25:69.24:0,69,1808	0/0:35,0:35:96.33:0,96,2567	0/0:12,0:10:27.09:0,27,695	0/0:18,0:18:45.13:0,45,1098	0/0:22,0:22:60.16:0,60,1354	0/0:7,0:7:21.07:0,21,565	0/0:22,0:21:57.20:0,57,1539	0/0:30,0:27:78.25:0,78,2032	0/0:12,0:11:27.09:0,27,727
chr10	56528573	.	GT	G	3829.64	PASS	AB=0.957;AC=23;AF=0.411;AN=56;BaseQRankSum=5.682;DP=555;FS=3.716;HRun=8;HaplotypeScore=74.4907;InbreedingCoeff=0.8846;MQ=60.35;MQ0=14;MQRankSum=3.277;QD=14.40;ReadPosRankSum=2.158;VQSLOD=3.7839;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:23:41.78:0,42,335	0/0:7,0:7:15.04:0,15,174	0/0:65,0:14:2:0,2,136	0/1:64,1:22:15.81:24,0,16	0/0:17,0:17:39.10:0,39,451	0/0:23,0:23:16.29:0,16,389	0/0:18,0:18:44.97:0,45,475	0/0:20,0:19:45.04:0,45,468	1/1:2,11:13:30.05:289,30,0	1/1:5,17:22:51.06:486,51,0	1/1:3,17:20:20.23:378,20,0	0/0:13,0:13:30.03:0,30,322	0/0:16,0:16:26.06:0,26,381	0/0:6,0:6:15:0,15,160	1/1:0,9:9:24.04:231,24,0	0/0:11,0:11:27.08:0,27,305	0/0:22,0:23:38.94:0,39,475	0/0:18,0:18:48.03:0,48,506	1/1:5,11:15:33:302,33,0	1/1:3,23:26:62.99:585,63,0	1/1:4,9:13:12.02:116,12,0	0/0:9,0:9:21.05:0,21,231	0/0:7,0:7:15.02:0,15,154	0/0:11,0:11:20.07:0,20,194	1/1:3,18:19:42.06:404,42,0	1/1:2,16:18:45.92:423,46,0	1/1:3,16:19:23.95:231,24,0	1/1:7,15:21:38.90:361,39,0
chr10	56529360	.	ACC	A	5651.54	PASS	AB=0.538;AC=23;AF=0.411;AN=56;BaseQRankSum=3.549;DP=484;FS=0.000;HRun=11;HaplotypeScore=85.3734;InbreedingCoeff=0.8401;MQ=69.25;MQ0=0;MQRankSum=-4.639;QD=23.45;ReadPosRankSum=4.269;VQSLOD=4.5995;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:62.17:0,62,755	0/0:3,0:3:3.01:0,3,46	0/0:22,0:20:25.60:0,26,371	0/0:12,0:13:18:0,18,206	0/0:9,0:9:21.04:0,21,271	0/0:14,1:20:0.41:0,0,94	0/1:3,2:21:49.49:49,0,82	0/0:9,0:10:14.37:0,14,121	1/1:3,20:23:57.14:605,57,0	1/1:2,18:20:51.05:542,51,0	1/1:2,9:11:27.02:286,27,0	0/0:7,0:16:27.45:0,27,95	0/0:11,0:13:29.03:0,29,316	0/0:7,0:11:17.02:0,17,168	1/1:4,24:28:69.10:734,69,0	0/0:8,0:17:26.99:0,27,92	0/0:16,0:20:52.61:0,53,674	0/0:15,0:15:36.09:0,36,524	1/1:7,14:20:38.99:408,39,0	1/1:2,12:14:42.11:446,42,0	1/1:1,18:19:48.12:509,48,0	0/0:0,0:4:7.49:0,7,26	0/0:6,0:12:15.36:0,15,54	0/0:5,1:29:23.95:0,24,149	1/1:5,15:20:48.07:507,48,0	1/1:2,21:23:63.06:670,63,0	1/1:6,26:32:75.17:798,75,0	1/1:3,6:9:9.02:96,9,0
chr10	56531057	.	GTGTC	G	11581.96	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=15.499;DP=1002;FS=1.642;HRun=0;HaplotypeScore=180.2295;InbreedingCoeff=0.9888;MQ=60.41;MQ0=9;MQRankSum=2.278;QD=30.80;ReadPosRankSum=6.594;VQSLOD=4.8702;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:73,0:73:99:0,174,4153	0/0:13,0:13:26.29:0,26,604	0/0:52,0:32:51.02:0,51,1052	0/0:68,0:46:81.14:0,81,1711	0/0:31,0:31:81.24:0,81,1872	0/0:22,0:22:53.73:0,54,1248	0/0:26,0:26:56.98:0,57,1314	0/0:46,0:46:99:0,108,2379	1/1:4,29:32:66.11:1105,66,0	1/1:12,26:38:42.61:1161,43,0	1/1:5,19:23:23.55:411,24,0	0/0:32,0:32:84.25:0,84,1927	0/0:26,0:26:57.20:0,57,1361	0/0:28,0:28:81.26:0,81,1857	1/1:4,36:40:69.24:1184,69,0	0/0:20,0:20:51.17:0,51,1155	0/0:51,0:51:99:0,111,2541	0/0:23,0:23:29.52:0,30,1037	1/1:10,13:21:10.48:491,10,0	1/1:4,22:26:60.21:1027,60,0	1/1:17,76:93:99:2389,143,0	0/0:29,0:29:75.26:0,75,1747	0/0:22,0:22:48.16:0,48,1115	0/0:64,0:64:99:0,162,3724	1/1:1,16:17:33.11:566,33,0	1/1:4,39:43:99:1862,117,0	1/1:5,26:32:69.24:1179,69,0	1/1:3,4:7:12.04:206,12,0
chr10	56531140	.	CGTGT	C	2701.45	PASS	AB=0.864;AC=41;AF=0.788;AN=52;BaseQRankSum=3.914;DP=732;FS=7.040;HRun=0;HaplotypeScore=172.1315;InbreedingCoeff=0.3757;MQ=55.25;MQ0=15;MQRankSum=-1.114;QD=5.02;ReadPosRankSum=0.212;VQSLOD=2.1494;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:3.88:0,4,548	1/1:2,0:7:5.74:56,6,0	./.	./.	0/0:23,0:26:32.04:0,32,471	1/1:12,2:18:17.67:195,18,0	1/1:27,5:35:14.38:158,14,0	0/0:32,0:30:3.89:0,4,19	1/1:17,0:23:20.86:175,21,0	1/1:26,0:26:11.90:97,12,0	1/1:8,0:9:0.47:1,0,0	1/1:19,3:23:9.02:140,9,0	0/0:19,0:20:18.25:0,18,269	0/1:26,0:31:6.15:6,0,144	1/1:10,0:16:11.57:94,12,0	1/1:15,3:21:32.83:377,33,0	1/1:22,7:29:0.49:83,0,0	0/1:19,10:29:34.98:301,0,35	1/1:18,0:19:3.47:29,3,0	1/1:11,0:15:6.05:57,6,0	0/1:63,0:63:16.31:23,0,16	1/1:18,5:23:5.65:93,6,0	1/1:19,2:21:2.66:47,3,0	1/1:36,9:48:38.85:547,39,0	1/1:8,0:13:8.23:63,8,0	1/1:25,0:28:14.35:166,14,0	1/1:17,0:23:5.47:117,5,0	1/1:1,0:4:3:28,3,0
chr10	56534641	.	TAA	T	1770.06	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=4.403;DP=378;FS=5.003;HRun=14;HaplotypeScore=49.3739;InbreedingCoeff=0.8990;MQ=55.15;MQ0=21;MQRankSum=-0.235;QD=13.94;ReadPosRankSum=2.127;VQSLOD=2.2237;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:16:33.11:0,33,458	1/1:1,3:5:11.75:95,12,0	0/0:12,0:7:5.95:0,6,57	0/0:8,0:3:8.46:0,8,54	0/0:18,0:19:35.52:0,36,413	1/1:2,7:8:14.92:138,15,0	1/1:0,5:5:15.01:136,15,0	1/1:11,12:20:26.35:288,26,0	0/0:4,0:5:12.01:0,12,136	0/0:15,0:13:23.52:0,24,277	0/0:4,0:5:11.52:0,12,119	1/1:3,5:5:15.02:139,15,0	0/0:10,0:8:17.54:0,18,205	0/0:10,0:8:15.05:0,15,200	0/0:8,0:4:12.04:0,12,168	1/1:5,12:15:33.02:305,33,0	1/1:11,16:21:50.68:454,51,0	1/1:7,8:11:27.03:249,27,0	0/0:21,0:15:38.10:0,38,469	0/0:11,0:9:23.57:0,24,300	0/0:10,0:11:17.44:0,17,329	1/1:2,0:3:2.70:12,3,0	1/1:2,4:6:11.98:111,12,0	1/1:4,5:7:6.01:56,6,0	0/0:23,0:20:51.17:0,51,715	0/0:21,1:21:28.34:0,28,594	0/0:19,0:17:50.46:0,50,565	0/0:17,0:12:30.07:0,30,400
chr10	56534985	.	AAGAGAGAGAGAGAGAGAGAG	A	157.72	PASS	AB=0.846;AC=3;AF=0.063;AN=48;BaseQRankSum=2.284;DP=492;FS=21.055;HRun=0;HaplotypeScore=208.1070;InbreedingCoeff=0.1398;MQ=65.27;MQ0=16;MQRankSum=-2.035;QD=3.94;ReadPosRankSum=0.900;VQSLOD=1.3582;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:26:12.04:0,12,697	0/0:11,0:11:10.28:0,10,204	./.	./.	0/0:17,0:17:3.01:0,3,196	0/0:14,0:14:3.01:0,3,70	0/0:14,0:14:3.01:0,3,65	0/0:28,0:28:16.18:0,16,163	0/0:10,0:10:6.02:0,6,216	0/0:14,0:14:19.62:0,20,528	./.	0/0:13,0:13:6.02:0,6,168	0/0:11,0:10:6.49:0,6,368	0/0:10,0:9:6.02:0,6,345	0/0:17,0:17:12.04:0,12,501	./.	1/1:16,2:17:3.01:158,3,0	0/1:18,4:21:88.31:88,0,120	0/0:23,0:21:16.63:0,17,441	0/0:15,0:13:9.03:0,9,302	0/0:24,0:23:21.06:0,21,789	0/0:23,0:22:12.04:0,12,356	0/0:15,0:15:6.02:0,6,259	0/0:29,0:27:27.09:0,27,499	0/0:11,0:11:15.05:0,15,545	0/0:27,0:27:9.65:0,10,193	0/0:15,0:16:18.06:0,18,663	0/0:5,0:4:3.01:0,3,168
chr10	56537357	.	CAAG	C	11999.20	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=2.330;DP=466;FS=26.845;HRun=0;HaplotypeScore=79.9354;InbreedingCoeff=0.9039;MQ=87.35;MQ0=1;MQRankSum=-8.052;QD=35.93;ReadPosRankSum=5.768;VQSLOD=2.8837;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:72.23:0,72,1537	1/1:0,3:3:9.03:147,9,0	0/0:33,0:32:83.49:0,83,1488	0/0:27,0:23:57.66:0,58,1036	0/0:20,0:20:54.06:0,54,1061	1/1:1,10:11:24.08:391,24,0	1/1:3,16:19:36.12:587,36,0	1/1:1,20:21:57.15:874,57,0	1/1:0,8:8:21.07:343,21,0	1/1:2,8:10:24.08:390,24,0	1/1:0,7:7:6.02:98,6,0	1/1:1,13:14:24.08:392,24,0	0/0:15,0:15:39.13:0,39,866	0/0:11,0:11:30.10:0,30,670	1/1:0,13:13:33.11:539,33,0	1/1:1,12:13:27.09:441,27,0	1/1:2,33:35:81.28:1322,81,0	1/1:3,22:25:54.18:882,54,0	1/1:0,22:22:63.21:1005,63,0	1/1:0,5:5:3.01:49,3,0	1/1:0,20:20:48.16:783,48,0	1/1:1,9:10:18.06:291,18,0	1/1:0,6:6:12.04:196,12,0	1/1:2,19:21:48.16:784,48,0	1/1:2,7:9:6.02:98,6,0	1/1:2,26:28:78.27:1271,78,0	1/1:0,22:22:51.17:832,51,0	1/1:1,11:12:18.06:286,18,0
chr10	56537767	.	C	CTGTGTG	1566.72	PASS	AB=1.000;AC=23;AF=0.442;AN=52;BaseQRankSum=-0.132;DP=316;FS=10.854;HRun=0;HaplotypeScore=171.2933;InbreedingCoeff=0.3150;MQ=53.98;MQ0=13;MQRankSum=-0.680;QD=11.11;ReadPosRankSum=-1.066;VQSLOD=2.2102;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:19,0:19:60.05:60,0,380	1/1:7,0:7:4.46:29,4,0	0/0:46,0:14:9.03:0,9,177	0/0:44,0:15:6.10:0,6,128	0/0:15,0:15:22.99:0,23,423	0/0:11,0:10:0.57:0,1,1	1/1:19,0:19:39.11:800,39,0	1/1:12,0:12:23.87:199,24,0	./.	0/1:5,0:5:6.51:7,0,14	0/0:4,0:4:3.49:0,3,49	1/1:0,2:5:6.02:136,6,0	0/1:8,0:8:0.19:0,0,48	0/0:5,0:5:9.03:0,9,187	0/0:9,0:9:17.37:0,17,208	1/1:3,0:3:0.32:42,0,0	1/1:18,0:18:22.64:243,23,0	1/1:8,0:7:6.91:107,7,0	0/1:13,0:13:3.02:3,0,66	0/1:5,0:5:18.60:19,0,30	0/0:11,0:10:13.98:0,14,115	0/0:2,1:3:0:0,0,0	1/1:7,0:7:1.61:71,2,0	0/0:7,1:8:2.92:0,3,18	0/1:5,0:5:1.34:1,0,13	0/1:6,0:6:0.97:1,0,16	0/0:13,0:13:1.51:0,2,99	./.
chr10	56537786	.	TGAGA	T	497.56	PASS	AB=0.968;AC=18;AF=0.409;AN=44;BaseQRankSum=1.300;DP=309;FS=57.889;HRun=0;HaplotypeScore=65.2091;InbreedingCoeff=0.1148;MQ=46.03;MQ0=10;MQRankSum=-0.953;QD=3.27;ReadPosRankSum=-1.253;VQSLOD=-0.6561;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:22,3:24:31.62:32,0,245	0/0:5,0:5:6.01:0,6,78	./.	./.	0/0:17,0:17:6.02:0,6,76	0/0:12,0:11:3.01:0,3,47	0/1:24,0:24:20.68:21,0,208	0/0:14,0:14:4.22:0,4,24	./.	1/1:7,0:7:1.30:33,1,0	1/1:5,0:5:2.37:8,2,0	0/0:9,0:9:11.78:0,12,183	0/0:8,0:8:2.74:0,3,12	0/0:5,0:5:12.04:0,12,186	1/1:13,0:14:11.52:115,12,0	0/1:8,0:8:34.23:34,0,86	0/1:20,0:19:38.72:39,0,74	1/1:8,0:7:4.25:30,4,0	1/1:11,0:11:9.02:114,9,0	./.	0/1:13,0:12:40.54:41,0,60	0/0:2,0:2:0:0,0,0	0/0:8,0:8:0:0,0,0	0/0:14,0:14:8.88:0,9,148	./.	1/1:4,2:6:6:69,6,0	0/1:10,0:11:55.19:98,0,55	./.
chr10	56538393	.	ACCCC	A	537.56	PASS	AB=0.860;AC=9;AF=0.161;AN=56;BaseQRankSum=5.955;DP=609;FS=1.783;HRun=5;HaplotypeScore=123.2650;InbreedingCoeff=-0.1143;MQ=46.34;MQ0=40;MQRankSum=-5.147;QD=5.17;ReadPosRankSum=-1.397;VQSLOD=-0.6670;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:35:71.05:0,71,1908	0/1:1,0:1:0:0,0,0	0/0:31,0:5:14.54:0,15,306	0/0:45,0:10:23.43:0,23,498	0/0:19,0:17:39.12:0,39,931	0/0:16,1:15:18.05:0,18,315	0/1:19,3:16:36.99:37,0,293	0/1:12,6:10:25.93:349,0,26	0/0:30,0:30:74.66:0,75,2222	0/0:30,0:27:66.23:0,66,1746	0/0:11,0:10:24.08:0,24,641	0/0:17,0:14:5.89:0,6,355	0/0:22,0:22:57.60:0,58,1389	0/0:16,0:15:36.12:0,36,929	0/0:19,0:18:35.51:0,36,923	0/1:5,1:5:46.37:46,0,107	0/1:13,2:11:43.98:44,0,135	0/1:12,0:11:15.94:16,0,135	0/0:20,0:15:42.14:0,42,983	0/0:18,0:17:45.15:0,45,1216	0/0:105,1:101:99:0,223,5957	0/1:4,3:8:41.25:41,0,126	0/1:6,1:7:62.11:90,0,62	0/1:12,3:13:48.23:48,0,62	0/0:14,0:12:36.12:0,36,957	0/0:27,0:24:19.33:0,19,1321	0/0:19,0:18:47.77:0,48,1169	0/0:3,0:3:9.03:0,9,252
chr10	56538439	.	CCACACACACACACCACACA	C	1031.73	PASS	AB=0.832;AC=6;AF=0.115;AN=52;BaseQRankSum=6.084;DP=944;FS=5.673;HRun=0;HaplotypeScore=309.4804;InbreedingCoeff=-0.1406;MQ=39.59;MQ0=159;MQRankSum=-5.941;QD=7.64;ReadPosRankSum=0.394;VQSLOD=1.3992;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:33:45.84:0,46,2342	0/1:5,8:10:75.80:150,0,76	./.	./.	0/0:26,0:20:36.12:0,36,1507	0/1:13,9:20:99:367,0,810	0/0:43,0:32:0.37:0,0,2284	0/0:73,0:22:36.01:0,36,863	0/0:36,0:31:55.38:0,55,2298	0/0:49,0:33:46.90:0,47,2640	0/0:20,0:17:27.02:0,27,1410	0/0:18,0:15:32.98:0,33,1341	0/0:27,0:22:17.37:0,17,1044	0/0:30,0:25:51.17:0,51,2344	0/0:26,0:17:21.57:0,22,967	0/1:11,0:8:6.09:6,0,859	0/1:25,1:21:99:132,0,1310	0/1:22,7:26:91.82:92,0,1199	0/0:62,0:15:36.12:0,36,978	0/0:23,0:20:14.12:0,14,1299	0/0:141,0:114:99:0,160,7694	0/0:20,0:18:26.83:0,27,1263	0/0:21,0:17:32.94:0,33,1448	0/1:30,4:25:99:404,0,1208	0/0:22,0:18:26.92:0,27,1307	0/0:50,0:38:76.45:0,76,2807	0/0:27,0:23:38.86:0,39,1045	0/0:13,0:8:12.04:0,12,560
chr10	56538548	.	C	CCACA	5937.51	PASS	AB=0.782;AC=28;AF=0.519;AN=54;BaseQRankSum=-2.699;DP=994;FS=22.555;HRun=0;HaplotypeScore=148.5961;InbreedingCoeff=-0.1339;MQ=40.97;MQ0=152;MQRankSum=5.063;QD=8.17;ReadPosRankSum=5.105;VQSLOD=2.2056;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:39:85.67:0,86,1229	0/1:13,0:11:32.94:33,0,36	./.	0/0:49,0:2:6.02:0,6,96	0/0:38,0:30:45.08:0,45,690	1/1:21,7:25:13.13:619,13,0	0/1:26,8:27:59.12:329,0,59	0/0:57,0:27:7.51:0,8,351	0/1:16,0:13:21.88:120,0,22	0/1:37,0:24:44.68:45,0,290	0/1:18,0:19:41.31:41,0,50	1/1:25,10:32:4.32:364,4,0	0/0:24,0:19:27.07:0,27,439	0/0:22,0:15:20.91:0,21,350	0/1:20,0:17:30.86:54,0,31	0/1:9,6:11:38.09:211,0,38	1/1:29,7:33:3.32:907,3,0	1/1:17,10:24:20.89:693,21,0	0/1:33,0:15:77.02:96,0,77	0/1:21,0:32:53.42:53,0,146	0/1:69,0:105:99:196,0,142	1/1:19,3:23:17.79:337,18,0	0/1:22,6:25:99:374,0,139	1/1:19,24:42:48.16:1181,48,0	1/1:15,0:14:2.88:60,3,0	0/1:30,0:28:99:167,0,133	0/1:9,0:14:13.26:13,0,73	0/1:15,0:15:33.57:43,0,34
chr10	56540284	.	AAAGGAAGGAAGGAAGG	A	6042.70	PASS	AB=0.887;AC=20;AF=0.385;AN=52;BaseQRankSum=-0.905;DP=447;FS=6.695;HRun=0;HaplotypeScore=155.3613;InbreedingCoeff=-0.3551;MQ=44.17;MQ0=53;MQRankSum=-7.059;QD=20.98;ReadPosRankSum=-0.145;VQSLOD=3.4828;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:32:57.07:0,57,1719	0/0:8,0:8:12.04:0,12,395	./.	./.	0/0:13,0:10:15.05:0,15,562	0/1:11,17:26:63.35:1003,0,63	1/1:10,0:7:8.99:125,9,0	0/0:19,0:10:8.51:0,9,116	0/1:12,0:7:70.80:71,0,107	0/1:23,0:19:99:656,0,169	0/1:14,0:12:99:400,0,225	0/1:5,5:10:86.44:621,0,86	0/0:16,0:12:30.07:0,30,760	0/0:13,0:10:30.09:0,30,777	0/0:10,0:7:3.01:0,3,95	0/1:9,0:9:99:424,0,177	0/1:15,8:21:99:249,0,165	0/1:9,7:14:99:123,0,120	0/1:10,0:5:85.41:90,0,85	0/1:22,0:21:99:516,0,273	0/1:11,0:7:65.87:87,0,66	0/0:4,6:10:6.02:0,6,145	0/1:9,8:17:99:463,0,99	0/1:18,7:20:99:117,0,172	0/1:14,0:9:26.07:302,0,26	0/1:16,0:11:99:209,0,131	1/1:23,0:16:21.07:492,21,0	0/1:5,0:5:94.36:94,0,157
chr10	56540304	.	GAAGGAAGGAAGGAAGGAAGGAAGGAAGAAAGAAAGA	G	2024.07	PASS	AB=0.978;AC=23;AF=0.500;AN=46;BaseQRankSum=0.598;DP=454;FS=0.725;HRun=0;HaplotypeScore=273.6277;InbreedingCoeff=-0.1630;MQ=34.82;MQ0=77;MQRankSum=2.310;QD=5.82;ReadPosRankSum=6.630;VQSLOD=2.0092;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:41,0:28:33.05:460,33,0	1/1:5,0:5:4.23:25,4,0	./.	./.	0/1:9,6:10:26.57:132,0,27	1/1:23,0:22:17.72:181,18,0	0/0:14,0:9:8.86:0,9,59	0/1:20,0:9:0:0,0,0	0/0:13,0:7:2.81:0,3,39	0/1:33,0:22:41.79:189,0,42	0/1:21,0:18:7.58:8,0,43	0/1:10,0:9:62.66:63,0,71	0/1:17,0:13:99:319,0,178	0/1:20,0:13:99:195,0,175	0/0:12,0:7:10.48:0,10,94	0/0:10,0:10:14.88:0,15,193	0/1:21,0:16:31.39:65,0,31	0/0:16,0:13:8.06:0,8,57	./.	0/1:20,0:18:55.59:195,0,56	./.	./.	1/1:14,0:14:10.11:60,10,0	0/1:29,0:19:30.38:30,0,32	0/1:16,0:13:70:70,0,200	0/1:17,0:11:26.46:39,0,26	1/1:16,0:10:9.03:119,9,0	0/1:10,0:10:24.40:24,0,168
chr10	56540311	.	G	GAAA	1403.89	PASS	AB=0.979;AC=13;AF=0.241;AN=54;BaseQRankSum=2.069;DP=442;FS=6.543;HRun=2;HaplotypeScore=104.4054;InbreedingCoeff=-0.1350;MQ=33.64;MQ0=74;MQRankSum=-5.043;QD=6.75;ReadPosRankSum=1.245;VQSLOD=-0.6059;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:26:63.18:0,63,1046	0/0:5,0:5:15.03:0,15,245	./.	0/0:5,0:1:2.98:0,3,21	0/0:16,0:10:21.07:0,21,379	0/1:22,0:21:2.98:3,0,113	0/0:18,0:12:29.68:0,30,264	0/0:18,0:7:19.79:0,20,297	0/1:13,0:7:47.62:73,0,48	0/1:33,1:21:99:392,0,136	0/1:21,0:18:95.31:95,0,160	0/0:10,0:9:20.24:0,20,176	0/0:17,0:13:35.45:0,35,372	0/0:21,0:13:34.95:0,35,554	0/0:13,0:7:13.28:0,13,154	0/0:9,0:9:26.76:0,27,422	0/1:19,0:13:11.87:12,0,152	0/0:14,0:11:14.56:0,15,132	0/1:9,0:3:46.58:70,0,47	0/1:19,1:19:99:299,0,119	0/1:8,0:5:27.80:28,0,34	0/0:11,0:9:9.02:0,9,136	0/0:12,0:12:16.30:0,16,167	0/0:24,0:16:4.09:0,4,88	0/1:18,1:13:69:180,0,69	0/1:14,1:10:28.21:28,0,286	1/1:16,0:10:26.61:313,27,0	0/1:11,0:11:61.77:62,0,138
chr10	56540312	.	G	GAAAGA	1684.35	PASS	AB=0.984;AC=17;AF=0.327;AN=52;BaseQRankSum=7.108;DP=436;FS=0.549;HRun=0;HaplotypeScore=112.6092;InbreedingCoeff=-0.3033;MQ=33.22;MQ0=74;MQRankSum=-8.133;QD=6.31;ReadPosRankSum=3.594;VQSLOD=1.5782;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:25:60.10:0,60,1009	0/0:5,0:5:12.04:0,12,233	./.	./.	0/0:16,0:10:21.07:0,21,370	0/1:22,0:21:34.79:244,0,35	0/0:18,0:11:22.26:0,22,212	0/0:16,0:6:18.03:0,18,295	0/1:14,0:8:1.30:1,0,36	0/1:33,1:21:99:419,0,107	0/1:21,0:18:59.32:59,0,168	0/1:10,0:9:99:133,0,103	0/0:17,0:13:31.86:0,32,267	0/0:21,0:13:28.10:0,28,555	0/0:13,0:7:5.73:0,6,130	0/0:9,0:9:26.90:0,27,422	0/1:19,0:13:42.77:43,0,129	0/1:15,0:11:6.70:7,0,68	0/1:9,0:3:0.66:1,0,57	0/1:17,2:17:99:329,0,159	0/1:8,0:5:11.95:12,0,30	0/0:11,0:9:9.02:0,9,139	0/1:11,0:11:72.94:77,0,73	0/1:24,0:15:35.09:35,0,68	0/1:18,1:13:64.80:154,0,65	0/1:14,1:10:47.45:47,0,321	1/1:16,0:10:6.15:206,6,0	0/1:11,0:11:65.89:66,0,152
chr10	56540313	.	AAGGAAGGAAGGAAGG	A	3909.08	PASS	AB=0.987;AC=19;AF=0.365;AN=52;BaseQRankSum=3.514;DP=435;FS=4.073;HRun=0;HaplotypeScore=151.2917;InbreedingCoeff=-0.4292;MQ=32.89;MQ0=76;MQRankSum=-7.463;QD=13.25;ReadPosRankSum=3.721;VQSLOD=2.5329;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:25:60.10:0,60,2042	0/0:4,0:4:12.04:0,12,447	./.	./.	0/0:16,0:10:21.01:0,21,658	0/1:21,0:20:96.18:669,0,96	0/1:18,0:11:15.04:15,0,222	0/0:16,0:6:18.03:0,18,431	0/1:14,0:8:30.02:30,0,168	0/1:34,1:21:99:440,0,456	0/1:20,1:18:99:274,0,382	0/1:10,0:9:99:430,0,162	0/0:17,0:13:36.08:0,36,901	0/0:21,0:13:39.07:0,39,1132	0/0:13,0:7:15.05:0,15,301	0/1:9,0:9:99:236,0,270	0/1:20,0:13:99:201,0,244	0/1:14,0:10:82.34:82,0,179	0/1:9,0:3:54.66:55,0,116	0/1:17,1:16:99:371,0,391	0/1:8,0:5:51.67:52,0,99	0/0:11,0:9:9.02:0,9,235	0/1:11,0:11:99:311,0,186	0/1:24,0:15:76.91:77,0,237	0/1:17,2:13:99:202,0,185	0/1:16,0:11:47.65:48,0,247	1/1:15,1:10:10.50:359,10,0	0/1:12,0:12:56.79:57,0,277
chr10	56540360	.	GAAGGAAGAAAGA	G	1894.18	PASS	AB=0.951;AC=20;AF=0.400;AN=50;BaseQRankSum=5.192;DP=392;FS=0.000;HRun=0;HaplotypeScore=137.3201;InbreedingCoeff=-0.2222;MQ=28.58;MQ0=81;MQRankSum=-4.536;QD=7.17;ReadPosRankSum=-2.557;VQSLOD=1.9938;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:16:23.05:0,23,661	./.	./.	./.	0/0:29,0:22:47.97:0,48,1345	0/1:16,0:14:25.69:33,0,26	0/0:13,0:7:13.33:0,13,104	0/0:8,0:2:5.93:0,6,65	0/0:10,0:4:2.90:0,3,16	0/1:27,0:12:61.70:97,0,62	0/1:13,0:11:5.78:46,0,6	0/1:10,0:9:54.91:55,0,74	0/0:14,0:10:20.92:0,21,696	0/0:16,0:8:21.06:0,21,669	0/1:14,0:7:25.90:111,0,26	0/0:6,0:6:10.46:0,10,100	0/1:23,0:12:31.31:31,0,46	0/1:15,0:10:55.68:56,0,251	0/1:7,0:2:10.49:90,0,10	1/1:14,3:14:15.92:342,16,0	0/1:7,0:4:25.77:26,0,77	1/1:8,0:6:0.47:1,0,0	0/1:9,0:9:14.36:14,0,16	0/1:25,0:16:14.88:15,0,66	0/1:19,0:16:99:221,0,166	0/1:17,0:13:99:308,0,227	1/1:12,2:9:17.54:374,18,0	0/1:6,6:13:99:228,0,182
chr10	56540391	.	GGA	G	136.43	PASS	AB=0.903;AC=6;AF=0.120;AN=50;BaseQRankSum=1.340;DP=295;FS=14.181;HRun=0;HaplotypeScore=71.5142;InbreedingCoeff=-0.0065;MQ=31.74;MQ0=48;MQRankSum=-0.725;QD=2.57;ReadPosRankSum=0.324;VQSLOD=0.5289;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:15:39.11:0,39,746	./.	./.	./.	0/0:27,0:23:51.17:0,51,1011	0/0:4,0:3:9.03:0,9,180	0/0:6,0:3:3.01:0,3,40	0/0:13,0:3:6.02:0,6,103	0/0:7,0:5:8.96:0,9,120	0/0:14,0:6:18.06:0,18,287	0/0:11,0:7:6.02:0,6,102	0/1:3,1:4:62.03:66,0,62	0/0:13,0:13:30.10:0,30,561	0/0:16,0:12:36.12:0,36,674	0/0:10,0:7:13.23:0,13,157	0/0:2,1:3:5.97:0,6,64	0/1:15,2:6:81.60:82,0,84	0/1:11,0:6:12.46:12,0,162	0/0:7,0:3:9:0,9,95	0/0:16,0:12:21.04:0,21,266	0/0:7,0:4:12.04:0,12,195	0/0:2,0:1:3.01:0,3,55	1/1:3,1:4:0.33:44,0,0	0/1:13,2:10:44.46:44,0,183	0/0:18,0:13:27.07:0,27,398	0/0:17,0:15:42.10:0,42,654	0/0:13,0:9:15.04:0,15,186	0/0:9,0:9:9.01:0,9,98
chr10	56540421	.	AAG	A	779.81	PASS	AB=0.900;AC=18;AF=0.346;AN=52;BaseQRankSum=4.753;DP=267;FS=10.181;HRun=0;HaplotypeScore=64.4174;InbreedingCoeff=0.4487;MQ=34.36;MQ0=28;MQRankSum=-3.462;QD=8.86;ReadPosRankSum=-0.919;VQSLOD=1.4893;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,1:21:63.20:0,63,1055	./.	./.	0/0:7,0:1:3.01:0,3,45	0/0:22,0:22:63.18:0,63,1035	0/0:5,0:3:9.02:0,9,113	1/1:3,3:3:3.01:42,3,0	1/1:21,0:7:10.39:118,10,0	0/1:6,0:5:21.20:21,0,27	0/0:11,0:6:11.05:0,11,94	0/0:5,0:3:2.74:0,3,12	1/1:2,3:3:8.92:94,9,0	0/0:10,0:10:27.09:0,27,474	0/0:15,0:13:39.07:0,39,656	0/0:7,0:5:8.37:0,8,85	0/1:3,1:4:40.07:69,0,40	1/1:6,5:7:12.29:165,12,0	1/1:8,2:5:12.01:145,12,0	0/0:11,0:5:13.02:0,13,102	0/0:12,0:9:12.58:0,13,98	0/1:6,1:5:27.90:36,0,28	1/1:1,2:3:8.39:92,8,0	1/1:3,0:3:3.01:37,3,0	0/1:11,1:10:61.56:131,0,62	0/0:9,0:7:17.13:0,17,118	0/0:14,0:13:30.95:0,31,191	0/0:8,0:8:12.36:0,12,60	0/0:9,0:7:2.50:0,2,9
chr10	56540423	.	G	GAA	849.56	PASS	AB=0.853;AC=18;AF=0.346;AN=52;BaseQRankSum=4.749;DP=276;FS=5.142;HRun=3;HaplotypeScore=65.7146;InbreedingCoeff=0.3711;MQ=34.22;MQ0=31;MQRankSum=-3.941;QD=8.25;ReadPosRankSum=-1.287;VQSLOD=-0.1625;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:21:63.13:0,63,900	./.	./.	0/0:7,0:1:3.01:0,3,44	0/0:23,0:23:66.18:0,66,941	0/0:7,0:3:7.97:0,8,53	0/1:6,1:4:0.93:46,0,1	1/1:16,0:7:12.91:142,13,0	0/1:5,0:5:30.85:31,0,92	0/1:12,0:7:17.64:18,0,148	0/0:6,0:3:2.80:0,3,13	1/1:4,0:3:8.99:90,9,0	0/0:10,0:10:27.09:0,27,412	0/0:15,0:13:39.06:0,39,565	0/0:8,0:6:8.97:0,9,99	0/1:3,1:4:36.46:69,0,36	1/1:9,1:6:11.77:125,12,0	1/1:7,3:6:12.04:199,12,0	0/0:12,0:6:14.21:0,14,130	0/0:13,0:10:17.19:0,17,145	0/1:6,0:5:27.69:53,0,28	1/1:4,0:4:8.82:56,9,0	1/1:2,1:3:3:28,3,0	0/1:7,3:9:39.48:164,0,39	0/0:9,0:7:17.77:0,18,138	0/0:12,1:12:35.02:0,35,296	0/0:8,0:8:14.18:0,14,107	0/0:9,0:7:2.50:0,2,9
chr10	56540447	.	AAG	A	483.43	PASS	AB=0.940;AC=17;AF=0.340;AN=50;BaseQRankSum=5.063;DP=297;FS=0.000;HRun=0;HaplotypeScore=59.4918;InbreedingCoeff=0.3430;MQ=32.62;MQ0=42;MQRankSum=-3.951;QD=4.93;ReadPosRankSum=-0.167;VQSLOD=2.3186;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,2:23:31.75:0,32,1036	./.	./.	0/0:22,0:2:4.26:0,4,58	0/0:21,0:21:60.20:0,60,1029	1/1:4,4:2:6.02:86,6,0	1/1:9,3:6:8.52:94,9,0	0/1:20,0:5:12.23:12,0,47	0/1:6,0:5:19.28:21,0,19	0/0:13,0:9:19.67:0,20,196	0/0:9,0:6:11.78:0,12,147	1/1:4,0:3:5.03:21,5,0	0/0:13,0:11:27.09:0,27,475	0/0:16,0:14:39.13:0,39,705	0/0:7,1:5:11.32:0,11,113	0/0:3,0:3:1.15:0,1,42	0/0:7,1:6:5.53:0,6,61	0/1:13,3:10:69.25:69,0,82	0/1:6,0:3:11.73:12,0,51	0/0:8,0:6:4.72:0,5,62	0/1:5,1:4:30.83:60,0,31	1/1:2,3:5:9.10:129,9,0	1/1:3,1:4:5.93:51,6,0	1/1:8,3:6:6.02:91,6,0	0/0:9,0:8:14.06:0,14,135	0/0:8,0:7:15.30:0,15,50	0/0:9,0:8:9.08:0,9,97	./.
chr10	56540461	.	AAG	A	2128.21	PASS	AB=0.686;AC=29;AF=0.558;AN=52;BaseQRankSum=6.150;DP=296;FS=0.634;HRun=0;HaplotypeScore=58.6047;InbreedingCoeff=0.1733;MQ=32.61;MQ0=42;MQRankSum=-7.321;QD=13.64;ReadPosRankSum=0.117;VQSLOD=3.1258;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,1:22:46.52:0,47,975	./.	./.	0/0:22,0:2:2.99:0,3,23	0/0:19,0:19:51.17:0,51,883	1/1:7,4:6:12.04:159,12,0	1/1:11,2:7:8.24:87,8,0	0/0:21,0:8:8.18:0,8,164	0/1:3,4:7:20.25:119,0,20	0/1:4,5:6:15:193,0,15	0/1:6,5:9:34.86:113,0,35	1/1:1,5:5:12.04:166,12,0	0/0:12,0:10:27.09:0,27,484	0/0:18,0:16:39.13:0,39,694	1/1:2,3:3:9.03:128,9,0	0/1:1,2:3:24.39:76,0,24	0/1:4,2:5:39.79:101,0,40	0/1:9,3:7:80.92:81,0,90	0/1:5,2:4:37.40:74,0,37	1/1:3,4:6:7.82:70,8,0	1/1:3,2:3:8.24:104,8,0	1/1:0,5:5:15.05:212,15,0	1/1:1,2:3:6.02:76,6,0	1/1:8,6:6:5.89:72,6,0	1/1:5,6:9:17.67:192,18,0	0/1:5,5:8:44.31:194,0,44	0/1:4,7:9:7.43:88,0,7	0/0:9,0:6:4.45:0,4,103
chr10	56540463	.	G	GAA	1862.09	PASS	AB=0.988;AC=32;AF=0.615;AN=52;BaseQRankSum=6.769;DP=304;FS=0.000;HRun=3;HaplotypeScore=63.4952;InbreedingCoeff=0.0772;MQ=32.86;MQ0=41;MQRankSum=-7.786;QD=9.60;ReadPosRankSum=-1.557;VQSLOD=-0.2797;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:22:37.35:0,37,817	./.	./.	0/0:21,0:2:2.98:0,3,22	0/0:20,0:20:54.16:0,54,789	1/1:8,2:5:11.78:147,12,0	1/1:10,5:9:0.10:110,0,0	0/1:21,0:8:14.02:14,0,146	0/1:5,0:5:20.39:115,0,20	0/1:8,0:6:19.71:82,0,20	0/1:11,0:9:23.23:27,0,23	1/1:6,0:6:15.05:221,15,0	0/0:12,0:10:27.09:0,27,411	0/0:18,0:16:39.13:0,39,594	1/1:6,0:4:8.39:97,8,0	0/1:4,0:4:24.56:96,0,25	0/1:6,0:5:31.43:79,0,31	0/1:12,0:7:70.41:85,0,70	0/1:6,0:4:38.83:39,0,39	1/1:11,0:10:13.25:91,13,0	1/1:4,0:3:7.72:51,8,0	1/1:5,0:5:15.05:212,15,0	1/1:2,1:3:6.02:100,6,0	1/1:13,0:7:6.32:88,6,0	1/1:9,1:9:15.08:130,15,0	0/1:9,0:7:13.75:207,0,14	1/1:13,0:10:0.52:35,1,0	0/1:10,0:7:2.43:2,0,92
chr10	56540471	.	AAG	A	1999.40	PASS	AB=0.822;AC=24;AF=0.462;AN=52;BaseQRankSum=7.527;DP=311;FS=5.760;HRun=0;HaplotypeScore=65.1106;InbreedingCoeff=-0.2297;MQ=33.75;MQ0=40;MQRankSum=-5.786;QD=10.99;ReadPosRankSum=-2.750;VQSLOD=2.2430;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:23:63.13:0,63,891	./.	./.	0/0:19,0:1:3:0,3,25	0/0:21,0:21:63.20:0,63,995	1/1:5,5:6:14.96:137,15,0	0/1:16,0:10:23.87:43,0,24	0/0:22,0:9:22.41:0,22,136	0/1:2,3:5:7.99:114,0,8	0/1:7,1:6:62.97:78,0,63	0/1:12,0:10:57.72:152,0,58	1/1:3,5:7:18.04:212,18,0	0/0:12,0:10:18.99:0,19,254	0/0:15,0:14:33.57:0,34,479	0/1:3,2:4:22.24:77,0,22	0/1:4,1:5:30.22:30,0,57	0/1:4,4:7:24.18:153,0,24	0/1:11,1:7:60.08:60,0,72	0/1:5,1:4:60.64:72,0,61	0/1:6,6:11:8.55:251,0,9	0/1:3,2:4:22.75:30,0,23	1/1:4,2:6:16.90:161,17,0	0/1:3,1:4:33.19:33,0,87	0/1:14,2:8:15.72:50,0,16	0/1:10,1:9:28.03:28,0,47	0/1:9,2:9:6.72:177,0,7	0/1:10,3:10:37.93:68,0,38	1/1:8,1:7:18.05:238,18,0
chr10	56540481	.	A	AAG	1052.24	PASS	AB=0.942;AC=16;AF=0.320;AN=50;BaseQRankSum=0.779;DP=321;FS=0.633;HRun=0;HaplotypeScore=70.0695;InbreedingCoeff=-0.3051;MQ=37.43;MQ0=36;MQRankSum=-3.339;QD=6.58;ReadPosRankSum=-3.480;VQSLOD=1.9928;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,1:24:33.45:0,33,825	./.	./.	./.	0/0:21,0:21:60.20:0,60,858	0/1:11,1:8:24.33:176,0,24	0/1:17,0:12:25.19:25,0,155	0/0:20,0:8:24.07:0,24,291	0/1:9,0:9:31.15:31,0,108	0/1:10,0:8:10.63:11,0,123	0/1:11,0:9:65.44:65,0,104	0/1:8,0:7:49.94:194,0,50	0/0:9,0:7:18:0,18,198	0/0:13,0:12:21.03:0,21,277	0/1:6,0:5:4.29:4,0,75	0/0:7,0:7:17.46:0,17,170	0/1:9,1:7:88.73:89,0,153	0/1:13,0:8:76.16:76,0,151	0/1:9,0:8:16.49:16,0,94	0/1:13,0:12:20.17:73,0,20	0/0:7,0:5:6.02:0,6,78	0/1:6,0:6:36.76:37,0,195	0/0:5,0:5:12.03:0,12,154	0/0:17,0:9:12.84:0,13,117	0/1:5,3:7:72.85:95,0,73	0/0:12,0:10:1.62:0,2,120	0/1:7,10:14:63.83:210,0,64	1/1:11,0:9:21.27:100,21,0
chr10	56540483	.	GAA	G	1184.50	PASS	AB=0.729;AC=9;AF=0.180;AN=50;BaseQRankSum=-0.411;DP=322;FS=8.015;HRun=3;HaplotypeScore=70.3627;InbreedingCoeff=0.0250;MQ=37.94;MQ0=35;MQRankSum=0.542;QD=14.99;ReadPosRankSum=-1.847;VQSLOD=-0.3336;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:24:68.40:0,68,1015	./.	./.	./.	0/0:21,0:21:63.21:0,63,1034	0/0:12,0:8:15.17:0,15,100	0/0:18,0:13:18.92:0,19,235	0/0:21,0:8:24.07:0,24,291	0/1:6,3:9:99:103,0,106	0/1:9,1:8:99:120,0,119	0/1:6,5:9:99:154,0,102	0/0:8,0:7:12.40:0,12,96	0/0:9,0:7:9.54:0,10,148	0/0:12,0:11:16.92:0,17,255	0/1:3,3:5:70.11:105,0,70	0/0:8,0:8:16.62:0,17,192	0/0:10,0:7:16.70:0,17,190	0/0:15,0:10:22.38:0,22,224	0/1:5,4:8:86.90:149,0,87	0/1:6,6:11:15.69:284,0,16	0/0:7,0:5:6.02:0,6,78	0/0:8,0:8:23.85:0,24,279	0/0:6,0:6:15.04:0,15,227	0/0:18,0:10:19.24:0,19,138	0/0:8,0:7:11.80:0,12,116	0/1:7,4:9:99:145,0,103	0/0:17,0:14:17.51:0,18,143	1/1:5,6:9:23.66:266,24,0
chr10	56540485	.	A	AAG	2003.60	PASS	AB=0.928;AC=14;AF=0.280;AN=50;BaseQRankSum=-0.853;DP=323;FS=0.000;HRun=0;HaplotypeScore=68.6757;InbreedingCoeff=-0.1855;MQ=38.68;MQ0=34;MQRankSum=-2.720;QD=14.52;ReadPosRankSum=-1.073;VQSLOD=2.7366;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:23:68.55:0,69,926	./.	./.	./.	0/0:22,0:22:63.20:0,63,885	0/1:13,0:9:6.50:6,0,44	0/0:19,0:14:21.92:0,22,271	0/0:20,0:8:24.08:0,24,337	0/1:7,2:9:75.71:188,0,76	0/1:8,3:9:99:178,0,106	0/1:10,1:9:99:292,0,101	0/1:8,0:7:7.91:8,0,60	0/0:8,0:6:15.01:0,15,174	0/0:11,0:10:18.03:0,18,220	0/1:6,0:5:55.82:135,0,56	0/0:7,0:7:21.02:0,21,240	0/1:10,0:7:11.88:12,0,151	0/0:16,0:11:13.40:0,13,230	0/1:8,1:8:92.20:229,0,92	0/1:11,2:12:15.67:373,0,16	0/0:4,3:5:5.95:0,6,61	0/0:9,0:9:20.01:0,20,263	0/0:7,0:7:14.98:0,15,189	0/0:18,0:10:18.82:0,19,164	0/1:9,0:8:18.62:19,0,75	0/1:9,2:9:99:233,0,121	0/1:17,0:14:48.63:49,0,68	1/1:9,2:9:24.08:433,24,0
chr10	56540741	.	GA	G	1558.94	PASS	AB=0.817;AC=23;AF=0.411;AN=56;BaseQRankSum=1.786;DP=547;FS=13.919;HRun=16;HaplotypeScore=69.3163;InbreedingCoeff=-0.0534;MQ=65.72;MQ0=3;MQRankSum=2.013;QD=3.78;ReadPosRankSum=5.272;VQSLOD=-0.6948;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:18,5:30:46.25:46,0,202	0/0:6,0:5:11.99:0,12,101	0/1:17,2:9:10.21:10,0,62	0/1:18,1:12:6.58:7,0,28	0/0:14,0:16:32.75:0,33,256	0/1:8,5:14:31.61:43,0,32	0/1:9,8:18:21.83:103,0,22	0/0:14,0:15:23.78:0,24,184	0/0:17,1:18:4.96:0,5,220	0/1:21,2:22:4.61:5,0,159	0/0:12,0:12:5.99:0,6,49	1/1:7,15:24:38.66:214,39,0	0/0:11,1:12:8.83:0,9,171	0/0:22,0:22:15.21:0,15,209	0/0:19,0:19:28.44:0,28,314	0/1:8,6:15:44.04:100,0,44	1/1:21,22:45:6.51:394,7,0	1/1:7,13:20:6.03:184,6,0	0/1:15,3:18:29.89:30,0,163	0/1:15,0:16:6.22:6,0,134	0/0:14,0:13:23.97:0,24,202	0/1:6,8:14:1.62:102,0,2	0/1:9,4:13:4.13:57,0,4	1/1:13,26:40:8.22:318,8,0	0/1:10,1:12:1.13:1,0,100	0/1:12,8:23:21.23:75,0,21	0/1:15,2:17:8.88:9,0,144	0/1:24,4:26:21.44:21,0,243
chr10	56541485	.	GAA	G	2594.34	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=2.913;DP=375;FS=38.987;HRun=11;HaplotypeScore=50.9954;InbreedingCoeff=0.9385;MQ=74.69;MQ0=3;MQRankSum=1.620;QD=21.99;ReadPosRankSum=1.616;VQSLOD=0.2363;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:42:99:0,118,1547	0/0:6,0:6:15.05:0,15,229	0/0:29,0:18:23.94:0,24,248	0/0:13,0:8:13.96:0,14,145	0/0:10,0:10:24.06:0,24,330	0/0:15,0:15:37.93:0,38,539	0/0:21,0:21:57.14:0,57,829	0/0:25,0:27:68.16:0,68,942	1/1:1,9:10:15.04:160,15,0	1/1:0,7:8:15.18:215,15,0	1/1:0,7:7:18.04:192,18,0	0/0:6,0:6:12.03:0,12,165	0/0:2,0:2:3.01:0,3,46	0/0:8,0:8:24.08:0,24,366	1/1:2,11:12:24.06:255,24,0	0/0:4,0:4:6.02:0,6,92	0/0:21,0:22:60.11:0,60,853	0/0:22,0:22:57.19:0,57,877	1/1:3,9:10:23.14:270,23,0	1/1:1,10:11:30.07:318,30,0	1/1:4,15:19:39.08:415,39,0	0/0:6,0:6:18.06:0,18,272	0/0:5,0:6:17.55:0,18,239	0/0:16,0:15:42.14:0,42,635	1/1:1,10:11:27.06:287,27,0	1/1:0,9:8:24.06:255,24,0	1/1:2,5:7:15.03:160,15,0	1/1:1,10:11:27.07:287,27,0
chr10	56543446	.	A	AAC	638.80	PASS	AB=0.813;AC=8;AF=0.148;AN=54;BaseQRankSum=6.068;DP=227;FS=39.423;HRun=0;HaplotypeScore=69.2676;InbreedingCoeff=-0.2219;MQ=54.43;MQ0=7;MQRankSum=-5.979;QD=8.19;ReadPosRankSum=2.377;VQSLOD=1.6059;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:20:18.44:0,18,757	0/1:5,1:6:28.09:28,0,211	0/0:10,0:6:17.27:0,17,237	0/0:13,0:6:8.30:0,8,64	0/1:6,2:8:83.66:84,0,205	0/0:4,0:4:12.04:0,12,183	0/1:11,1:11:13.70:14,0,372	0/0:16,0:16:40.82:0,41,653	0/0:2,0:2:6.02:0,6,91	0/1:6,2:8:99:113,0,160	0/1:6,3:9:99:109,0,162	./.	0/0:3,0:3:6.02:0,6,91	0/0:7,0:7:21.07:0,21,320	0/0:3,0:3:9.03:0,9,137	0/0:2,0:2:6.02:0,6,92	0/0:7,0:9:20.28:0,20,322	0/0:9,0:9:24.06:0,24,345	0/0:16,0:13:39.09:0,39,570	0/1:6,6:12:99:292,0,167	0/0:9,0:9:27.05:0,27,377	0/0:1,0:1:3.01:0,3,46	0/0:2,0:2:6.02:0,6,91	0/0:15,0:15:42.10:0,42,614	0/1:5,1:6:28.59:29,0,211	0/1:14,3:17:99:103,0,529	0/0:5,0:5:15.05:0,15,229	0/0:1,0:1:3.01:0,3,46
chr10	56543569	.	C	CA	84.32	PASS	AB=0.772;AC=12;AF=0.250;AN=48;BaseQRankSum=3.883;DP=132;FS=5.772;HRun=3;HaplotypeScore=107.0485;InbreedingCoeff=0.0959;MQ=41.52;MQ0=0;MQRankSum=1.437;QD=2.41;ReadPosRankSum=1.709;VQSLOD=-0.0709;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:29.06:0,29,255	1/1:0,2:2:6:53,6,0	1/1:7,0:4:0.85:5,1,0	./.	0/0:6,0:6:8.81:0,9,54	0/1:6,0:6:1.25:1,0,76	0/1:2,2:4:24.38:39,0,24	0/0:17,1:16:1.27:0,1,180	0/0:3,0:3:8.81:0,9,54	0/0:2,0:2:5.83:0,6,34	0/0:2,0:1:2.88:0,3,15	./.	0/0:5,0:5:14.67:0,15,90	0/0:5,0:5:14.67:0,15,90	0/0:3,0:3:8.85:0,9,56	0/1:1,1:2:12.35:19,0,12	0/1:3,1:4:12.73:13,0,43	0/1:4,1:5:15.93:16,0,39	0/0:14,0:13:37.73:0,38,209	./.	0/0:1,0:1:2.92:0,3,17	./.	1/1:0,1:1:2.99:24,3,0	0/1:2,2:4:8.18:43,0,8	0/0:2,0:2:5.88:0,6,37	0/0:8,0:8:23.43:0,23,137	0/0:5,0:5:14.80:0,15,99	0/0:1,0:1:2.94:0,3,18
chr10	56543572	.	C	CAAA	440.13	PASS	AB=0.823;AC=14;AF=0.292;AN=48;BaseQRankSum=1.717;DP=128;FS=7.641;HRun=1;HaplotypeScore=109.2218;InbreedingCoeff=0.0857;MQ=47.65;MQ0=0;MQRankSum=-1.526;QD=8.15;ReadPosRankSum=1.094;VQSLOD=-0.5459;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:40.81:0,41,188	1/1:0,2:2:6.02:101,6,0	0/0:4,0:2:0:0,0,0	./.	0/0:6,0:6:8.56:0,9,43	0/1:6,0:6:28.37:28,0,42	0/1:2,2:4:12.28:90,0,12	0/1:18,1:16:51.33:51,0,85	0/0:3,0:3:8.19:0,8,37	0/0:2,0:2:5.05:0,5,19	0/0:2,0:1:2.94:0,3,18	./.	0/1:5,0:5:4.08:4,0,35	0/0:5,0:5:13.59:0,14,60	0/0:3,0:3:8.24:0,8,37	0/1:1,1:2:6.05:45,0,6	0/1:3,1:4:24.16:39,0,24	0/1:4,1:5:19.29:42,0,19	0/0:14,0:13:29.43:0,29,109	./.	0/0:1,0:1:2.68:0,3,11	./.	1/1:0,1:1:3.01:50,3,0	0/1:2,2:4:3.15:91,0,3	1/1:2,0:2:5.88:36,6,0	0/0:8,0:8:21.02:0,21,84	0/0:5,0:5:13.84:0,14,76	0/0:1,0:1:2.60:0,3,10
chr10	56543588	.	AC	A	4970.76	PASS	AC=48;AF=1.000;AN=48;DP=151;FS=0.000;HRun=1;HaplotypeScore=95.6984;InbreedingCoeff=-0.0536;MQ=46.39;MQ0=2;QD=33.14;VQSLOD=4.3912;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,21:20:54.13:680,54,0	1/1:0,2:2:6.02:78,6,0	1/1:3,0:3:2.99:39,3,0	./.	1/1:0,7:7:5.97:57,6,0	1/1:0,8:8:24.08:311,24,0	1/1:0,5:5:15.05:194,15,0	1/1:0,18:13:39.13:506,39,0	1/1:0,4:4:12.04:156,12,0	1/1:0,3:3:9.03:117,9,0	1/1:0,2:1:3.01:39,3,0	1/1:0,2:2:6.02:78,6,0	1/1:0,6:6:18.06:229,18,0	1/1:0,5:5:15.05:194,15,0	1/1:0,6:6:15.05:194,15,0	1/1:0,3:3:9.03:117,9,0	1/1:0,4:4:12.04:156,12,0	1/1:0,4:3:9.03:117,9,0	1/1:0,14:14:42.14:545,42,0	./.	1/1:0,2:2:3.01:39,3,0	./.	./.	1/1:0,4:4:12.04:155,12,0	1/1:0,3:3:9.03:117,9,0	1/1:0,11:11:33.11:428,33,0	1/1:0,9:8:24.08:311,24,0	1/1:0,4:4:9.03:116,9,0
chr10	56544796	.	T	TTG	800.04	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-3.971;DP=540;FS=3.685;HRun=0;HaplotypeScore=83.1296;InbreedingCoeff=0.9468;MQ=57.91;MQ0=18;MQRankSum=1.522;QD=22.86;ReadPosRankSum=1.488;VQSLOD=4.0730;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:34:82.54:0,83,946	1/1:0,9:9:15.05:227,15,0	0/0:22,0:7:18.20:0,18,148	0/0:13,0:9:12.09:0,12,93	0/0:20,0:20:50.12:0,50,527	0/0:29,0:29:75.13:0,75,764	0/0:21,0:19:45.03:0,45,442	1/1:4,20:26:46.64:691,47,0	0/0:24,0:23:20.79:0,21,363	0/0:20,0:20:35.52:0,36,413	0/0:19,0:19:36.21:0,36,352	0/0:18,0:14:29.94:0,30,270	0/0:18,0:17:35.87:0,36,396	0/0:17,0:17:50.84:0,51,527	0/0:27,0:26:32.73:0,33,514	0/0:12,0:12:32.87:0,33,346	0/0:18,0:17:39:0,39,431	0/0:12,0:12:32.30:0,32,349	0/0:18,0:18:44.37:0,44,309	0/0:20,0:20:45.85:0,46,340	0/0:9,0:8:23.67:0,24,179	0/0:5,0:5:11.95:0,12,102	0/0:20,0:18:46.40:0,46,409	0/0:29,0:28:51.01:0,51,506	0/0:18,0:15:17.72:0,18,235	0/0:26,0:25:70.12:0,70,567	0/0:25,0:25:22.13:0,22,370	0/0:10,0:10:27.90:0,28,203
chr10	56545392	.	ATATCTATCTATCTATCTATC	A	2067.26	PASS	AB=0.852;AC=23;AF=0.500;AN=46;BaseQRankSum=2.504;DP=595;FS=2.255;HRun=0;HaplotypeScore=298.7284;InbreedingCoeff=0.5653;MQ=65.77;MQ0=10;MQRankSum=-1.999;QD=8.08;ReadPosRankSum=-0.933;VQSLOD=2.2554;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:24:5.46:0,5,48	0/0:6,0:9:12.04:0,12,320	./.	./.	0/0:26,0:31:8.52:0,9,387	0/0:15,0:26:15:0,15,171	1/1:13,0:13:2.84:14,3,0	./.	1/1:21,9:30:13.86:635,14,0	0/0:13,0:13:0:0,0,0	1/1:16,4:20:3.01:95,3,0	0/0:14,0:19:9.02:0,9,177	0/0:18,0:19:18.04:0,18,1031	0/0:12,0:15:18.06:0,18,1587	1/1:13,3:16:3.01:157,3,0	./.	0/0:18,0:19:13.12:0,13,305	0/0:15,0:13:9:0,9,165	1/1:14,3:16:6.02:245,6,0	1/1:14,4:17:3.01:96,3,0	1/1:29,0:28:2.99:24,3,0	0/1:19,0:23:99:108,0,102	0/0:24,0:28:14.97:0,15,166	1/1:14,0:14:2.80:13,3,0	1/1:13,1:14:3.01:157,3,0	1/1:23,2:25:6.02:207,6,0	1/1:32,5:37:9.03:472,9,0	./.
chr10	56548057	.	CTT	C	1914.18	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=5.956;DP=441;FS=9.529;HRun=15;HaplotypeScore=55.5023;InbreedingCoeff=0.9540;MQ=65.56;MQ0=3;MQRankSum=1.904;QD=15.44;ReadPosRankSum=5.134;VQSLOD=1.9301;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:26:47.52:0,48,527	0/0:10,0:10:18.04:0,18,228	0/0:13,0:8:12.03:0,12,143	0/0:10,0:10:8.65:0,9,50	0/0:21,0:23:53.38:0,53,530	1/1:4,15:18:29.94:264,30,0	1/1:2,8:11:17.77:145,18,0	0/0:30,0:26:42.10:0,42,535	0/0:14,0:15:33.08:0,33,404	0/0:20,0:20:39.07:0,39,482	0/0:7,0:8:17.97:0,18,177	1/1:2,11:13:26.96:238,27,0	0/0:5,0:5:12.01:0,12,129	0/0:5,0:5:12:0,12,142	0/0:18,0:21:38.12:0,38,375	1/1:0,13:13:38.99:343,39,0	1/1:3,19:22:50.96:449,51,0	1/1:3,13:16:29.96:264,30,0	0/0:18,0:18:38.05:0,38,429	0/0:27,0:28:47.80:0,48,664	0/0:11,0:11:21.05:0,21,269	1/1:5,3:8:8.94:79,9,0	1/1:3,9:12:23.73:211,24,0	1/1:2,5:7:15:132,15,0	0/0:17,0:20:38.95:0,39,397	0/0:16,0:20:48.06:0,48,556	0/0:24,0:24:51.10:0,51,616	0/0:6,0:6:12.04:0,12,162
chr10	56549297	.	A	AACACACACACAC	5266.47	PASS	AC=38;AF=0.760;AN=50;BaseQRankSum=3.699;DP=556;FS=0.000;HRun=0;HaplotypeScore=168.7323;InbreedingCoeff=0.7332;MQ=55.31;MQ0=38;MQRankSum=-2.847;QD=15.77;ReadPosRankSum=-1.768;VQSLOD=3.2668;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:35:33.11:0,33,1033	0/0:8,0:7:11.87:0,12,250	./.	./.	0/0:10,0:11:21.05:0,21,559	1/1:19,0:18:9.50:216,10,0	1/1:26,0:23:0.47:1,0,0	0/0:25,0:24:0.47:0,0,1	1/1:17,0:16:11.38:157,11,0	1/1:15,0:13:17.98:369,18,0	1/1:18,0:16:9.02:213,9,0	1/1:18,0:16:12.04:322,12,0	0/0:8,0:8:12.04:0,12,401	0/0:16,0:16:18.05:0,18,458	1/1:12,0:12:6.02:125,6,0	1/1:20,0:20:21.07:556,21,0	1/1:13,3:15:4.26:89,4,0	1/1:12,0:11:24.03:694,24,0	1/1:7,0:7:12.04:426,12,0	1/1:14,0:13:6.02:148,6,0	1/1:32,0:28:16.33:243,16,0	1/1:12,0:11:5.94:43,6,0	./.	1/1:27,0:24:6.02:138,6,0	1/1:17,0:16:15.03:319,15,0	1/1:23,0:23:36.12:919,36,0	1/1:18,0:15:11.44:224,11,0	1/1:10,0:6:5.97:64,6,0
chr10	56549593	.	CT	C	1079.53	PASS	AB=0.860;AC=30;AF=0.536;AN=56;BaseQRankSum=5.501;DP=495;FS=7.921;HRun=16;HaplotypeScore=57.2766;InbreedingCoeff=0.3053;MQ=55.98;MQ0=15;MQRankSum=-1.256;QD=3.48;ReadPosRankSum=2.897;VQSLOD=-0.3945;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:37:41.82:0,42,446	1/1:1,2:3:2.91:18,3,0	0/0:24,1:5:5.41:0,5,34	0/0:30,0:7:2.29:0,2,7	0/0:17,1:18:12.82:0,13,204	0/1:10,1:11:8.56:9,0,41	0/0:21,0:20:33.24:0,33,258	1/1:14,3:18:13.53:75,14,0	0/1:14,3:17:9.40:59,0,9	0/1:10,8:18:3.54:82,0,4	1/1:8,3:11:10.60:59,11,0	0/1:8,1:9:3.86:4,0,98	0/1:14,0:14:6.55:7,0,106	0/0:10,0:11:8.38:0,8,89	1/1:4,10:16:23.51:125,24,0	0/1:12,2:14:13.23:13,0,110	0/0:27,2:27:20.09:0,20,289	0/1:17,1:17:1.12:1,0,167	1/1:21,4:24:18.36:109,18,0	1/1:9,6:14:14.48:90,14,0	1/1:2,2:6:8.19:45,8,0	0/1:8,1:9:10.77:11,0,21	0/1:17,1:17:8.50:9,0,127	0/0:12,0:12:14.82:0,15,113	0/1:9,7:17:15.04:102,0,15	1/1:16,10:26:26.09:161,26,0	1/1:8,10:18:28.07:156,28,0	1/1:11,4:16:23.83:131,24,0
chr10	56551319	.	GA	G	4030.26	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=10.348;DP=632;FS=3.798;HRun=7;HaplotypeScore=67.4733;InbreedingCoeff=0.9996;MQ=78.70;MQ0=2;MQRankSum=-0.643;QD=24.88;ReadPosRankSum=5.060;VQSLOD=4.0452;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,135,1588	0/0:10,0:10:27.04:0,27,321	0/0:38,1:36:51.70:0,52,872	0/0:29,0:23:51.11:0,51,580	0/0:31,0:31:84.24:0,84,1023	1/1:2,17:19:39.08:397,39,0	1/1:1,26:27:60.13:611,60,0	0/0:36,0:36:90.24:0,90,1053	0/0:15,0:15:36.11:0,36,439	0/0:22,0:22:66.20:0,66,805	0/0:22,0:22:63.20:0,63,788	1/1:2,14:16:39.08:397,39,0	0/0:15,0:15:45.14:0,45,563	0/0:15,0:15:45.13:0,45,541	0/0:24,0:24:60.15:0,60,713	1/1:2,17:19:48.11:489,48,0	1/1:1,21:22:57.12:580,57,0	1/1:1,12:13:33.07:336,33,0	0/0:31,0:31:84.24:0,84,1005	0/0:29,0:29:78.21:0,78,958	0/0:21,0:21:51.15:0,51,626	1/1:1,18:19:47.22:487,47,0	1/1:1,12:13:33.07:336,33,0	1/1:0,14:14:39.09:397,39,0	0/0:17,0:17:39.12:0,39,477	0/0:20,0:20:54.16:0,54,666	0/0:30,0:30:87.24:0,87,1052	0/0:10,0:10:30.10:0,30,374
chr10	56553183	.	C	CA	9889.44	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-17.820;DP=665;FS=0.955;HRun=2;HaplotypeScore=62.1875;InbreedingCoeff=0.9944;MQ=84.59;MQ0=0;MQRankSum=-8.054;QD=36.90;ReadPosRankSum=1.342;VQSLOD=5.4325;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,126,1540	1/1:0,14:14:33.58:476,34,0	0/0:15,0:15:41.47:0,41,457	0/0:26,0:26:69.08:0,69,735	0/0:21,0:21:63.20:0,63,781	1/1:0,18:18:51.17:734,51,0	1/1:1,35:36:93.31:1339,93,0	1/1:2,22:24:66.17:877,66,0	0/0:19,0:19:51.16:0,51,632	0/0:24,0:24:69.20:0,69,835	0/0:16,0:16:48.15:0,48,594	1/1:1,14:15:36.12:518,36,0	0/0:21,0:21:63.18:0,63,767	0/0:16,0:16:48.14:0,48,582	0/0:24,0:24:66.18:0,66,793	1/1:2,18:20:10.97:611,11,0	1/1:2,34:36:99:1426,99,0	1/1:1,32:33:84.26:1188,84,0	0/0:16,0:16:45.14:0,45,556	0/0:18,0:18:51.16:0,51,631	0/0:54,0:54:99:0,156,1909	1/1:0,17:17:42.14:605,42,0	1/1:1,12:13:36.12:518,36,0	1/1:1,41:42:99:1597,111,0	0/0:20,0:20:57.18:0,57,706	0/0:25,0:25:75.23:0,75,918	0/0:24,0:24:72.23:0,72,892	0/0:15,0:15:45.14:0,45,556
chr10	56555455	.	G	GT	7234.64	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-11.457;DP=647;FS=6.580;HRun=8;HaplotypeScore=67.8409;InbreedingCoeff=0.9610;MQ=72.59;MQ0=3;MQRankSum=-0.560;QD=26.70;ReadPosRankSum=-1.257;VQSLOD=5.1150;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:73.25:0,73,804	1/1:1,3:4:6.02:69,6,0	0/0:25,0:24:36.33:0,36,395	0/0:19,0:16:3.32:0,3,189	0/0:24,0:24:66.04:0,66,604	1/1:1,22:23:60.18:692,60,0	1/1:3,16:20:47.93:519,48,0	1/1:14,32:46:96.67:1062,97,0	0/0:19,0:19:51.01:0,51,462	0/0:29,0:29:81.03:0,81,738	0/0:17,0:17:38.60:0,39,357	1/1:4,25:29:69.20:796,69,0	0/0:14,0:14:29.95:0,30,265	0/0:23,0:23:66.04:0,66,604	0/0:17,0:17:51.03:0,51,467	1/1:4,14:18:38.20:441,38,0	1/1:6,33:39:98.62:1101,99,0	1/1:4,19:21:45.13:519,45,0	0/0:26,0:25:66.03:0,66,604	0/0:22,0:22:57:0,57,516	0/0:32,0:32:78.03:0,78,714	1/1:2,18:21:30.44:547,30,0	1/1:0,18:18:48.14:554,48,0	1/1:2,28:30:81.24:934,81,0	0/0:14,0:14:39.01:0,39,357	0/0:27,0:27:75.04:0,75,686	0/0:24,0:24:72.04:0,72,659	0/0:9,0:9:27.01:0,27,247
chr10	56556987	.	T	TA	968.76	PASS	AB=0.961;AC=40;AF=0.714;AN=56;BaseQRankSum=9.841;DP=326;FS=9.960;HRun=12;HaplotypeScore=77.3717;InbreedingCoeff=0.2373;MQ=46.80;MQ0=26;MQRankSum=-10.065;QD=3.61;ReadPosRankSum=1.053;VQSLOD=0.0981;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:61.99:0,62,432	1/1:6,0:6:11.36:56,11,0	0/0:13,0:6:13.45:0,13,88	0/1:14,1:8:13.24:13,0,70	0/1:16,3:19:3.93:4,0,238	1/1:10,0:9:8.52:43,9,0	1/1:7,0:6:5.68:28,6,0	0/1:27,1:19:5.29:80,0,5	1/1:2,0:2:2.80:13,3,0	1/1:10,0:11:13.99:68,14,0	1/1:17,0:17:10.81:119,11,0	1/1:4,0:4:5.68:29,6,0	0/0:6,0:6:13.96:0,14,92	0/0:11,0:10:25.89:0,26,180	1/1:5,0:5:13.99:67,14,0	1/1:8,0:7:17.04:85,17,0	1/1:15,0:12:17.04:86,17,0	0/1:15,0:10:7.49:42,0,7	1/1:13,0:10:17.02:85,17,0	0/1:12,0:12:6.87:39,0,7	1/1:6,0:4:2.68:11,3,0	1/1:1,0:1:0.89:2,1,0	1/1:5,0:5:5.68:29,6,0	1/1:2,0:1:2.68:11,3,0	0/1:19,0:18:14.80:15,0,30	0/1:22,0:18:26.38:116,0,26	1/1:13,0:11:7.68:58,8,0	0/1:10,0:9:7.83:39,0,8
chr10	56556990	.	A	AAAAAAAAAAAC	13147.31	PASS	AB=0.575;AC=42;AF=0.750;AN=56;BaseQRankSum=-4.964;DP=369;FS=10.131;HRun=0;HaplotypeScore=89.9220;InbreedingCoeff=0.6035;MQ=48.93;MQ0=21;MQRankSum=-9.565;QD=48.51;ReadPosRankSum=1.462;VQSLOD=3.7074;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:25:38.32:0,38,1576	1/1:1,0:7:12.04:577,12,0	0/0:16,0:7:14.06:0,14,158	0/0:17,0:9:4.76:0,5,229	0/0:20,0:20:48.56:0,49,1217	1/1:3,7:11:12.04:533,12,0	1/1:1,4:6:6.02:318,6,0	1/1:27,0:19:11.36:442,11,0	1/1:2,0:6:6.02:229,6,0	1/1:6,0:17:33.56:1116,34,0	1/1:4,0:19:14.22:1254,14,0	1/1:1,2:4:6.02:318,6,0	0/0:7,0:6:15.05:0,15,380	0/0:12,0:10:27.06:0,27,706	1/1:0,0:9:15.05:621,15,0	1/1:2,6:10:17.90:955,18,0	1/1:4,10:13:23.95:1130,24,0	1/1:5,8:10:12.04:617,12,0	1/1:9,0:12:26.08:704,26,0	1/1:3,0:13:11.39:494,11,0	1/1:5,0:4:5.99:131,6,0	1/1:2,0:2:2.99:116,3,0	1/1:0,4:4:6.02:318,6,0	1/1:1,0:1:3.01:134,3,0	0/1:5,0:23:29.29:236,0,29	1/1:3,0:21:26.82:1812,27,0	1/1:4,0:18:8.71:611,9,0	0/1:4,0:12:25.48:481,0,25
chr10	56557182	.	GA	G	3588.06	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=8.116;DP=488;FS=6.029;HRun=10;HaplotypeScore=52.3278;InbreedingCoeff=0.9848;MQ=63.89;MQ0=8;MQRankSum=-0.129;QD=20.50;ReadPosRankSum=2.196;VQSLOD=4.6806;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:96.14:0,96,1018	0/0:7,0:7:21.06:0,21,232	0/0:15,0:11:28.22:0,28,253	0/0:20,0:14:31.73:0,32,262	0/0:15,0:14:36.04:0,36,376	0/0:13,0:13:36.10:0,36,398	0/0:16,0:16:39.04:0,39,407	0/0:37,0:37:71.18:0,71,895	1/1:3,10:13:26.99:234,27,0	1/1:1,12:12:35.97:308,36,0	1/1:3,13:16:38.99:339,39,0	0/0:8,0:8:21.06:0,21,232	0/0:13,0:13:27.04:0,27,279	0/0:12,0:13:38.93:0,39,405	1/1:3,5:7:12:104,12,0	0/0:14,0:14:39.11:0,39,431	0/0:27,0:26:72.18:0,72,787	0/0:33,0:33:99:0,99,1095	1/1:4,19:23:56.99:495,57,0	1/1:3,14:15:38.99:338,39,0	1/1:2,9:10:23.99:208,24,0	0/0:8,0:7:9.01:0,9,91	0/0:12,0:12:33.09:0,33,363	0/0:23,0:23:51.20:0,51,566	1/1:1,13:13:24:208,24,0	1/1:1,19:20:56.99:495,57,0	1/1:3,24:27:68.98:599,69,0	1/1:0,13:13:29.99:260,30,0
chr10	56560622	.	T	TA	3117.69	PASS	AB=0.917;AC=23;AF=0.426;AN=54;BaseQRankSum=-7.398;DP=424;FS=5.440;HRun=11;HaplotypeScore=48.5363;InbreedingCoeff=0.8552;MQ=63.25;MQ0=1;MQRankSum=1.330;QD=17.61;ReadPosRankSum=-0.828;VQSLOD=4.1869;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,1:30:47.25:0,47,547	1/1:0,5:5:12.02:122,12,0	./.	0/0:10,0:8:2.82:0,3,37	0/0:21,0:21:38.81:0,39,301	1/1:3,13:17:38.86:368,39,0	1/1:3,7:10:12.02:122,12,0	1/1:9,18:27:25.18:508,25,0	0/0:9,0:9:23.91:0,24,186	0/0:9,0:9:20.92:0,21,162	0/0:10,0:10:14.65:0,15,99	1/1:3,17:20:48.10:487,48,0	0/0:15,0:15:34.83:0,35,253	0/0:10,0:11:22.91:0,23,163	0/0:21,0:21:50.78:0,51,392	1/1:4,11:15:3.82:220,4,0	1/1:4,23:26:39.89:586,40,0	1/1:5,17:22:45.09:457,45,0	0/1:10,1:11:16.08:16,0,136	0/0:9,0:9:17.92:0,18,139	0/0:22,0:22:53.78:0,54,416	1/1:1,5:6:11.96:109,12,0	1/1:4,7:11:14.88:152,15,0	1/1:0,6:6:18.04:183,18,0	0/0:10,0:10:26.83:0,27,200	0/0:23,0:24:64.79:0,65,493	0/0:27,0:27:61.55:0,62,469	0/0:14,0:14:41.77:0,42,316
chr10	56561393	.	T	TAA	444.34	PASS	AB=0.962;AC=6;AF=0.107;AN=56;BaseQRankSum=-2.496;DP=281;FS=2.668;HRun=12;HaplotypeScore=41.7185;InbreedingCoeff=0.5686;MQ=62.16;MQ0=2;MQRankSum=4.101;QD=9.45;ReadPosRankSum=-1.880;VQSLOD=0.3545;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:27.03:0,27,249	1/1:1,2:4:6.02:84,6,0	0/1:11,0:3:11.64:12,0,21	0/1:13,0:6:1.26:1,0,20	0/0:16,0:16:44.92:0,45,403	0/0:12,0:13:29.70:0,30,261	0/0:7,0:7:18.02:0,18,166	1/1:3,12:18:38.10:466,38,0	0/0:4,0:4:12.01:0,12,111	0/0:15,0:14:36:0,36,333	0/0:8,0:8:18:0,18,162	0/0:7,0:8:14.88:0,15,186	0/0:14,0:14:42.05:0,42,388	0/0:5,0:5:15.02:0,15,139	0/0:4,0:4:12:0,12,106	0/0:12,0:12:32.90:0,33,295	0/0:11,0:12:35.78:0,36,315	0/0:5,0:5:14.76:0,15,123	0/0:17,0:17:47.14:0,47,429	0/0:10,0:10:30:0,30,268	0/0:10,0:10:24:0,24,221	0/0:4,0:4:5.94:0,6,55	0/0:4,0:4:11.71:0,12,87	0/0:4,0:4:12.01:0,12,110	0/0:10,0:10:27.01:0,27,250	0/0:10,0:10:30.03:0,30,277	0/0:14,0:14:42.03:0,42,383	0/0:18,0:16:38.95:0,39,361
chr10	56563112	.	CT	C	2303.19	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=17.039;DP=588;FS=1.184;HRun=3;HaplotypeScore=118.3101;InbreedingCoeff=0.9887;MQ=83.50;MQ0=1;MQRankSum=-15.692;QD=12.59;ReadPosRankSum=2.266;VQSLOD=2.3856;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,114,1605	1/1:1,7:8:20.66:145,21,0	0/0:20,0:20:51.15:0,51,688	0/0:20,0:20:49.03:0,49,675	0/0:26,0:26:78.25:0,78,1105	1/1:3,17:20:50.16:345,50,0	1/1:8,12:20:38.12:255,38,0	1/1:6,12:18:35.67:258,36,0	0/0:18,0:18:54.18:0,54,778	0/0:29,0:29:84.25:0,84,1148	0/0:27,0:27:81.27:0,81,1164	1/1:6,19:25:58.53:363,59,0	0/0:17,0:17:45.14:0,45,632	0/0:22,0:22:63.21:0,63,906	0/0:28,0:28:84.27:0,84,1191	1/1:2,21:23:62:404,62,0	1/1:6,8:14:18.58:103,19,0	1/1:1,9:9:14.89:117,15,0	0/0:27,0:27:81.27:0,81,1166	0/0:21,0:21:63.17:0,63,852	0/0:17,0:17:48.16:0,48,687	1/1:6,9:15:29.44:184,29,0	1/1:7,13:20:41.24:290,41,0	1/1:5,5:10:11.54:64,12,0	0/0:27,0:27:81.27:0,81,1166	0/0:29,0:29:84.27:0,84,1194	0/0:31,0:31:90.28:0,90,1260	0/0:5,0:5:15.05:0,15,216
chr10	56563118	.	ATACTTTTT	A	9090.46	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=16.986;DP=526;FS=0.000;HRun=0;HaplotypeScore=165.3605;InbreedingCoeff=0.9876;MQ=85.72;MQ0=1;MQRankSum=-16.067;QD=67.34;ReadPosRankSum=1.849;VQSLOD=4.9573;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,129,5278	1/1:1,6:7:21.07:475,21,0	0/0:20,0:20:60.21:0,60,2584	0/0:19,0:19:57.09:0,57,1968	0/0:26,0:26:78.27:0,78,3354	1/1:1,16:17:51.17:1183,51,0	1/1:1,12:13:39.13:893,39,0	1/1:0,11:11:33.11:823,33,0	0/0:17,0:17:51.18:0,51,2160	0/0:25,0:25:75.26:0,75,3365	0/0:24,0:24:72.24:0,72,3088	1/1:3,18:21:63.21:1415,63,0	0/0:15,0:15:45.14:0,45,1845	0/0:21,0:21:63.22:0,63,2829	0/0:28,0:28:84.29:0,84,3563	1/1:3,20:23:69.24:1584,69,0	1/1:1,8:9:21.07:536,21,0	1/1:1,4:4:12.04:300,12,0	0/0:28,0:28:84.26:0,84,3423	0/0:22,0:22:66.23:0,66,2948	0/0:14,0:14:42.14:0,42,1766	1/1:1,9:10:30.10:707,30,0	1/1:0,13:13:39.13:893,39,0	1/1:1,5:6:12.04:281,12,0	0/0:29,0:29:87.30:0,87,3879	0/0:26,0:26:78.27:0,78,3595	0/0:29,0:29:87.30:0,87,3960	0/0:5,0:5:15.05:0,15,531
chr10	56565610	.	T	TA	2722.89	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-11.298;DP=376;FS=12.171;HRun=9;HaplotypeScore=35.2664;InbreedingCoeff=0.9228;MQ=68.22;MQ0=0;MQRankSum=-1.176;QD=22.50;ReadPosRankSum=-0.218;VQSLOD=3.0620;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:89.98:0,90,781	1/1:0,9:9:24.06:264,24,0	0/0:8,0:8:10.80:0,11,82	0/0:4,0:3:3:0,3,26	0/0:25,0:25:62.97:0,63,547	1/1:3,12:15:30.08:332,30,0	1/1:1,7:9:17.88:180,18,0	1/1:4,19:23:22.06:463,22,0	0/0:12,0:12:26.99:0,27,234	0/0:12,0:12:8.98:0,9,260	0/0:19,0:19:47.97:0,48,414	1/1:2,11:13:30.08:332,30,0	0/0:11,0:11:29.99:0,30,260	0/0:6,0:6:11.99:0,12,103	0/0:6,0:6:15:0,15,130	1/1:0,8:8:21.06:232,21,0	1/1:3,21:24:57.15:631,57,0	1/1:3,15:18:39.11:431,39,0	0/0:11,0:11:26.99:0,27,234	0/0:14,0:14:26.97:0,27,234	0/0:9,0:9:26.99:0,27,234	1/1:0,2:2:6.02:66,6,0	0/0:9,0:9:20.97:0,21,179	0/0:5,0:5:12:0,12,104	0/0:24,0:24:62.99:0,63,547	0/0:19,0:19:50.96:0,51,435	0/0:23,0:23:62.99:0,63,547	0/0:7,0:7:14.97:0,15,130
chr10	56567939	.	G	GA	1632.29	PASS	AB=0.795;AC=20;AF=0.357;AN=56;BaseQRankSum=-5.089;DP=636;FS=15.180;HRun=15;HaplotypeScore=97.7900;InbreedingCoeff=-0.0182;MQ=61.29;MQ0=6;MQRankSum=1.478;QD=4.68;ReadPosRankSum=-4.465;VQSLOD=-0.7376;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,2:42:6.34:0,6,230	0/0:5,0:5:5.85:0,6,36	0/1:12,0:7:6.49:6,0,42	0/0:19,0:9:3.24:0,3,17	0/1:19,3:24:10.71:11,0,118	0/1:16,0:18:3.64:4,0,80	0/0:16,0:19:33.25:0,33,191	0/1:17,3:22:21.34:21,0,106	1/1:7,14:22:17.84:248,18,0	0/1:19,12:33:12.27:215,0,12	0/1:10,3:16:36.21:47,0,36	0/0:38,1:41:37.98:0,38,339	0/0:19,0:21:25.02:0,25,149	0/0:18,1:21:15.38:0,15,83	0/1:13,17:30:5.17:173,0,5	0/0:29,2:37:20.98:0,21,319	0/0:22,1:25:6.30:0,6,173	0/0:26,0:27:51.74:0,52,311	0/1:14,8:23:38.33:124,0,38	1/1:7,10:18:11.77:192,12,0	0/1:9,14:25:4.21:192,0,4	0/1:9,1:11:2.58:3,0,90	0/1:18,1:19:7.70:8,0,72	0/0:29,0:28:67.17:0,67,408	1/1:7,4:11:12.36:93,12,0	0/1:19,14:34:50.44:240,0,50	0/1:20,4:24:33.45:159,0,33	0/1:1,5:6:6.02:64,0,6
chr10	56570794	.	ATT	A	3921.03	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=1.076;DP=523;FS=3.561;HRun=10;HaplotypeScore=68.3673;InbreedingCoeff=0.9865;MQ=61.35;MQ0=3;MQRankSum=2.277;QD=23.34;ReadPosRankSum=3.053;VQSLOD=3.3529;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:35:93.25:0,93,1399	0/0:12,0:12:33.11:0,33,519	0/0:23,0:13:33.05:0,33,361	0/0:15,0:7:13.86:0,14,184	0/0:28,0:30:77.36:0,77,1112	0/0:4,0:20:48.07:0,48,453	0/0:17,0:17:51.17:0,51,801	0/0:29,0:29:66.69:0,67,1012	1/1:1,11:12:21.06:234,21,0	1/1:4,12:16:36.08:401,36,0	1/1:5,12:16:33.08:363,33,0	0/0:1,0:14:30.05:0,30,286	0/0:20,0:20:54.15:0,54,772	0/0:18,0:18:51.16:0,51,779	1/1:6,15:21:39.09:435,39,0	0/0:3,0:10:21.03:0,21,198	0/0:3,0:26:54.09:0,54,515	0/0:4,0:20:39.03:0,39,365	1/1:2,13:14:36.04:387,36,0	1/1:3,18:21:54.13:599,54,0	1/1:2,15:17:27.06:301,27,0	0/0:3,0:21:47.75:0,48,439	0/0:7,0:24:44.99:0,45,409	0/0:2,0:17:36.05:0,36,340	1/1:1,13:14:30.08:334,30,0	1/1:1,16:17:48.13:533,48,0	1/1:1,11:11:21.04:234,21,0	1/1:0,6:6:9.02:100,9,0
chr10	56571262	.	A	AAGGCAGAGGCAG	6871.55	PASS	AB=0.600;AC=21;AF=0.375;AN=56;BaseQRankSum=-5.400;DP=692;FS=0.000;HRun=0;HaplotypeScore=199.9037;InbreedingCoeff=0.7900;MQ=55.59;MQ0=3;MQRankSum=-9.451;QD=30.27;ReadPosRankSum=-3.758;VQSLOD=3.4771;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:51.07:0,51,978	1/1:0,0:4:3.01:157,3,0	0/0:29,0:16:4.32:0,4,85	0/0:26,0:23:33.11:0,33,868	0/0:31,0:31:42.05:0,42,1065	1/1:4,8:15:6.02:353,6,0	1/1:12,9:25:3.01:176,3,0	1/1:37,0:35:48.14:1004,48,0	0/0:31,0:31:69.23:0,69,2155	0/0:27,0:27:48.13:0,48,1245	0/0:12,0:12:24.05:0,24,599	1/1:9,13:25:12.04:705,12,0	0/0:27,0:27:57.18:0,57,1606	0/0:22,0:22:47.26:0,47,1322	0/0:27,0:27:45.15:0,45,1452	1/1:7,14:28:30.28:1764,30,0	0/1:8,10:24:18.67:517,0,19	1/1:9,4:19:12.04:635,12,0	0/0:23,0:23:33.10:0,33,812	0/0:31,0:31:51.13:0,51,1421	0/0:50,0:50:99:0,99,2457	1/1:3,5:9:12.04:594,12,0	1/1:8,3:15:2.80:120,3,0	1/1:9,11:25:18.53:847,19,0	0/0:24,0:24:42.11:0,42,1070	0/0:38,0:38:63.09:0,63,1702	0/0:21,0:21:45.14:0,45,1377	0/0:9,0:9:15.01:0,15,348
chr10	56571507	.	CA	C	12793.64	PASS	AB=0.800;AC=53;AF=0.981;AN=54;BaseQRankSum=-2.794;DP=521;FS=2.326;HRun=6;HaplotypeScore=118.3560;InbreedingCoeff=-0.0178;MQ=60.76;MQ0=1;MQRankSum=-1.012;QD=24.70;ReadPosRankSum=1.438;VQSLOD=3.6850;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:24,2:26:66.14:693,66,0	1/1:6,1:7:15.02:149,15,0	./.	0/1:6,2:8:5.69:41,0,6	1/1:21,6:26:48.11:507,48,0	1/1:16,2:18:42.10:445,42,0	1/1:15,4:19:29.04:276,29,0	1/1:2,21:23:66.10:670,66,0	1/1:13,5:17:42.08:433,42,0	1/1:15,6:20:42.04:432,42,0	1/1:6,2:8:9.01:87,9,0	1/1:20,0:20:60.15:638,60,0	1/1:17,6:22:52.90:514,53,0	1/1:13,4:17:48.09:489,48,0	1/1:14,8:22:60.09:603,60,0	1/1:21,5:26:75.17:786,75,0	1/1:18,5:23:66.13:679,66,0	1/1:12,9:21:30.24:475,30,0	1/1:16,8:24:68.96:714,69,0	1/1:16,7:23:63.10:640,63,0	1/1:15,5:20:42.10:447,42,0	1/1:12,2:14:30.05:305,30,0	1/1:13,3:16:38.39:351,38,0	1/1:27,1:28:78.15:818,78,0	1/1:10,3:12:30.06:311,30,0	1/1:20,9:27:66.16:696,66,0	1/1:13,3:16:41.51:403,42,0	1/1:7,0:7:18.04:191,18,0
chr10	56571589	.	C	CGA	531.12	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-3.897;DP=451;FS=17.373;HRun=0;HaplotypeScore=74.4148;InbreedingCoeff=0.6802;MQ=42.43;MQ0=68;MQRankSum=-0.491;QD=16.60;ReadPosRankSum=-3.279;VQSLOD=1.2923;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:27:56.99:0,57,641	1/1:3,5:6:8.81:112,9,0	0/0:39,0:8:1.11:0,1,61	0/0:29,0:2:5.94:0,6,40	0/0:18,0:15:32.87:0,33,340	0/0:18,0:16:20.24:0,20,157	0/0:18,0:15:8.44:0,8,196	1/1:22,2:23:53.78:532,54,0	0/0:12,0:10:20.93:0,21,190	0/0:19,0:15:35.95:0,36,391	0/0:11,0:11:20.93:0,21,208	0/0:15,0:12:20.44:0,20,135	0/0:16,0:14:27.42:0,27,275	0/0:16,0:14:20.74:0,21,205	0/0:18,0:18:39.49:0,39,358	0/0:13,0:13:8.69:0,9,52	0/0:11,0:10:20.74:0,21,166	0/0:22,0:21:41.45:0,41,316	0/0:18,0:14:26.94:0,27,278	0/0:15,0:15:38.51:0,39,363	0/0:9,0:9:20.76:0,21,176	0/0:5,0:4:8.88:0,9,70	0/0:4,0:4:5.80:0,6,40	0/0:18,0:18:21.14:0,21,229	0/0:10,0:9:11.58:0,12,161	0/0:20,0:17:41.92:0,42,384	0/0:11,0:9:17.85:0,18,181	0/0:5,0:5:12.01:0,12,142
chr10	56571594	.	G	GA	1009.82	PASS	AB=0.887;AC=26;AF=0.464;AN=56;BaseQRankSum=2.658;DP=538;FS=4.349;HRun=15;HaplotypeScore=86.2427;InbreedingCoeff=-0.1328;MQ=45.75;MQ0=62;MQRankSum=-2.224;QD=2.69;ReadPosRankSum=-3.934;VQSLOD=-0.5931;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:36:33.55:0,34,216	0/1:9,0:8:9.83:16,0,10	0/0:35,0:9:10.87:0,11,115	0/0:28,0:2:5.88:0,6,36	0/1:18,1:18:5.86:6,0,75	0/1:7,11:16:17.98:83,0,18	0/1:13,3:16:34.11:89,0,34	0/1:25,1:28:4.38:88,0,4	0/0:18,0:15:7.44:0,7,52	0/1:19,1:19:43.78:44,0,88	0/0:14,0:14:14.49:0,14,88	1/1:20,2:19:20.82:136,21,0	0/1:15,1:15:3.05:3,0,61	0/1:11,7:16:10.50:10,0,57	0/1:16,1:18:39.31:39,0,74	1/1:4,11:15:7.24:53,7,0	1/1:11,2:14:7.63:106,8,0	0/1:23,7:29:13.36:202,0,13	0/0:12,0:13:14.84:0,15,92	0/1:18,0:20:20.42:20,0,60	0/1:13,1:14:32.09:32,0,38	1/1:7,1:7:11.90:85,12,0	1/1:3,5:8:7.51:48,8,0	0/1:10,8:19:17.42:72,0,17	0/0:11,0:11:12.33:0,12,73	0/1:25,1:25:7.06:7,0,61	0/1:19,1:18:30.40:30,0,54	0/1:6,0:6:10.11:10,0,42
chr10	56571980	.	TTG	T	271.22	PASS	AB=0.986;AC=12;AF=0.222;AN=54;BaseQRankSum=4.877;DP=382;FS=58.769;HRun=0;HaplotypeScore=47.1828;InbreedingCoeff=-0.0892;MQ=44.31;MQ0=46;MQRankSum=1.076;QD=1.78;ReadPosRankSum=-0.035;VQSLOD=-0.6068;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:16:8.32:0,8,166	0/1:5,0:5:1.07:1,0,64	./.	0/0:14,0:4:8.44:0,8,50	0/0:13,0:12:12.25:0,12,93	0/1:9,0:6:26.47:26,0,43	0/1:16,0:12:9.73:76,0,10	0/1:12,1:6:22.32:22,0,89	0/0:15,0:12:9.46:0,9,115	0/0:8,0:8:19.74:0,20,141	0/0:13,0:11:17.86:0,18,169	0/1:10,0:8:6.11:42,0,6	0/0:6,1:6:4.42:0,4,40	0/1:13,0:10:59.24:66,0,59	0/0:15,0:14:25.07:0,25,180	1/1:14,1:12:2.62:122,3,0	0/1:31,0:15:0.54:1,0,107	0/1:13,1:9:28.77:29,0,35	0/1:18,0:15:7.79:8,0,306	0/0:10,0:8:18.60:0,19,107	0/0:13,0:10:8.59:0,9,139	0/0:5,0:2:5.87:0,6,36	0/1:8,0:7:13.30:13,0,41	0/0:6,0:4:6.02:0,6,60	0/0:11,0:11:19.91:0,20,169	0/0:25,0:23:19.81:0,20,400	0/0:15,0:11:19.45:0,19,130	0/0:14,0:10:28.54:0,29,180
chr10	56572230	.	CGTGTGTGTGTGTGTGTGTGTGTGT	C	839.14	PASS	AB=0.938;AC=15;AF=0.300;AN=50;BaseQRankSum=1.406;DP=590;FS=8.085;HRun=0;HaplotypeScore=328.6157;InbreedingCoeff=0.5333;MQ=62.49;MQ0=21;MQRankSum=-3.901;QD=4.03;ReadPosRankSum=-1.545;VQSLOD=0.6987;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:25:24.06:0,24,1603	0/0:7,0:7:9.03:0,9,559	1/1:29,0:22:0.47:1,0,0	./.	0/0:9,0:8:6.02:0,6,355	0/0:24,0:23:21.01:0,21,604	0/0:16,0:16:9.03:0,9,450	0/0:21,0:21:3.58:0,4,9	1/1:22,0:22:2.97:20,3,0	0/0:30,0:28:2.68:0,3,11	1/1:27,2:29:3.01:186,3,0	0/0:19,0:16:12.04:0,12,340	0/0:8,0:8:8.97:0,9,282	0/0:10,0:10:12.02:0,12,479	1/1:34,2:35:3.01:186,3,0	0/0:20,0:20:22.89:0,23,1041	0/0:21,0:19:29.85:0,30,1219	0/0:14,0:13:21.06:0,21,1014	0/1:28,2:29:2.12:180,0,2	./.	1/1:25,0:22:4.21:30,4,0	0/0:14,0:14:21.02:0,21,655	0/0:13,0:11:3.01:0,3,104	0/0:29,0:29:24.08:0,24,847	1/1:18,5:23:3.01:186,3,0	0/0:36,0:36:3.39:0,3,35	./.	1/1:12,2:14:3.01:186,3,0
chr10	56573562	.	A	AT	10860.62	PASS	AB=0.613;AC=43;AF=0.768;AN=56;BaseQRankSum=-0.900;DP=631;FS=3.177;HRun=10;HaplotypeScore=80.7592;InbreedingCoeff=0.8408;MQ=64.10;MQ0=2;MQRankSum=-1.396;QD=20.57;ReadPosRankSum=-0.974;VQSLOD=5.3570;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:32:76.93:0,77,622	1/1:1,5:6:15.04:160,15,0	0/0:6,0:6:8.95:0,9,67	0/0:9,0:7:3.96:0,4,44	0/0:21,0:21:56.89:0,57,465	1/1:1,22:23:48.47:623,48,0	1/1:8,13:23:24.11:333,24,0	1/1:12,20:32:56.11:560,56,0	1/1:11,14:25:20.59:381,21,0	1/1:9,18:26:60.14:629,60,0	1/1:5,20:25:60.15:635,60,0	1/1:4,23:28:48.31:606,48,0	0/0:13,0:13:29.96:0,30,246	0/0:22,0:22:56.90:0,57,468	1/1:1,29:30:78.20:831,78,0	1/1:9,19:29:65.87:647,66,0	1/1:4,29:35:80.83:813,81,0	1/1:2,23:26:66:684,66,0	1/1:9,19:29:38.28:563,38,0	1/1:8,19:28:46.19:465,46,0	0/1:7,10:18:13.53:249,0,14	1/1:5,11:16:24.06:255,24,0	1/1:13,2:17:18.03:137,18,0	1/1:6,21:27:35.04:606,35,0	1/1:1,8:9:21.05:224,21,0	1/1:12,13:26:38.91:389,39,0	1/1:8,21:29:7.86:495,8,0	1/1:0,19:19:54.14:575,54,0
chr10	56573573	.	C	CT	4406	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=0.710;DP=604;FS=4.769;HRun=10;HaplotypeScore=100.7903;InbreedingCoeff=0.9037;MQ=60.51;MQ0=6;MQRankSum=1.426;QD=18.99;ReadPosRankSum=3.352;VQSLOD=5.2478;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:90.29:0,90,1224	0/0:6,0:6:17.03:0,17,107	0/0:3,0:3:7.50:0,7,34	0/1:7,0:4:8.56:9,0,38	0/0:26,0:26:69.18:0,69,930	1/1:26,0:26:47.42:599,47,0	1/1:22,0:21:18.67:302,19,0	0/0:21,0:21:48.67:0,49,335	0/0:24,0:24:50.87:0,51,370	0/0:26,0:25:56.44:0,56,444	0/0:25,0:25:67.80:0,68,473	1/1:31,0:31:50.99:573,51,0	0/0:12,0:12:36.11:0,36,483	0/0:24,0:24:69.20:0,69,928	0/0:30,0:30:86.59:0,87,564	1/1:27,0:27:21.42:534,21,0	1/1:36,0:36:68.80:749,69,0	1/1:28,0:27:69.37:709,69,0	0/0:25,0:24:54.49:0,54,412	0/0:23,0:23:54.64:0,55,366	0/0:18,0:17:47.31:0,47,430	1/1:14,0:14:22.30:225,22,0	1/1:8,7:15:8.41:132,8,0	1/1:26,0:26:32.18:575,32,0	0/0:9,0:9:23.34:0,23,157	0/0:21,0:21:61.84:0,62,549	0/0:28,0:28:68.73:0,69,537	0/0:21,0:21:57.23:0,57,337
chr10	56575164	.	GACACACACAC	G	2945.89	PASS	AB=0.740;AC=19;AF=0.352;AN=54;BaseQRankSum=2.866;DP=598;FS=11.914;HRun=0;HaplotypeScore=166.5546;InbreedingCoeff=0.5293;MQ=57.44;MQ0=8;MQRankSum=-4.713;QD=13.64;ReadPosRankSum=2.235;VQSLOD=2.1215;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:42:57.19:0,57,2000	1/1:3,0:10:9.03:209,9,0	0/0:33,0:25:3.01:0,3,42	0/0:34,0:26:3:0,3,62	0/0:20,0:19:24.08:0,24,670	0/0:9,0:17:2.63:0,3,115	0/0:22,0:28:37.63:0,38,1116	0/1:11,0:11:0.01:0,0,0	1/1:3,9:13:15.05:428,15,0	1/1:10,9:18:21.06:400,21,0	1/1:5,9:15:8.86:232,9,0	0/0:14,0:29:30.09:0,30,1115	0/0:9,0:15:18.06:0,18,681	0/0:20,0:22:29.59:0,30,1276	1/1:12,17:31:21.54:588,22,0	0/0:16,0:28:35.85:0,36,1172	0/0:15,0:23:27.09:0,27,1144	0/0:12,0:20:39.13:0,39,1324	1/1:13,1:18:17.10:340,17,0	0/1:10,12:22:10.44:409,0,10	0/1:26,14:40:44.37:84,0,44	0/0:7,0:17:17.90:0,18,331	0/0:12,0:11:9.15:0,9,332	0/0:27,0:30:36.39:0,36,1424	0/1:4,0:10:18.95:24,0,19	0/1:9,7:15:39.10:295,0,39	1/1:2,6:9:6.02:119,6,0	./.
chr10	56575176	.	C	CAC	1730.16	PASS	AB=1.000;AC=24;AF=0.480;AN=50;BaseQRankSum=-5.941;DP=597;FS=0.718;HRun=0;HaplotypeScore=112.4371;InbreedingCoeff=0.2928;MQ=53.06;MQ0=10;MQRankSum=5.783;QD=4.69;ReadPosRankSum=-0.698;VQSLOD=2.8280;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:49,0:48:12.04:322,12,0	0/0:10,0:10:8.52:0,9,42	./.	./.	1/1:24,0:23:5.54:57,6,0	1/1:17,0:17:2.18:43,2,0	1/1:26,0:26:17.97:192,18,0	./.	0/0:11,0:11:14.20:0,14,70	0/0:19,0:18:7.15:0,7,28	0/0:16,0:16:5.51:0,6,28	0/1:30,0:29:17.69:122,0,18	0/1:15,0:15:23.14:41,0,23	1/1:27,0:25:26.73:301,27,0	0/0:32,0:32:19.88:0,20,98	0/1:27,0:25:39.74:158,0,40	0/1:25,0:24:24.37:24,0,150	0/1:21,0:21:51.43:158,0,51	0/0:17,0:16:8.52:0,9,42	0/0:23,0:23:11.02:0,11,51	0/1:39,0:38:8.15:18,0,8	1/1:18,0:18:5.73:50,6,0	1/1:8,4:12:9.17:86,9,0	1/1:33,0:31:30.49:319,30,0	0/0:12,0:12:2.84:0,3,14	0/0:17,0:16:1.77:0,2,12	0/0:9,0:8:5.68:0,6,28	1/1:5,0:4:2.22:7,2,0
chr10	56575401	.	GCACACACACA	G	1089.14	PASS	AB=0.777;AC=15;AF=0.300;AN=50;BaseQRankSum=3.671;DP=535;FS=0.955;HRun=0;HaplotypeScore=153.6013;InbreedingCoeff=0.4582;MQ=56.86;MQ0=23;MQRankSum=-5.195;QD=6.64;ReadPosRankSum=-0.939;VQSLOD=2.6713;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:38:46.02:0,46,1615	1/1:2,0:3:0.47:1,0,0	./.	./.	0/0:15,0:16:23.92:0,24,841	1/1:3,8:13:12.04:337,12,0	1/1:8,11:18:3.01:89,3,0	0/0:28,0:31:29.38:0,29,282	0/1:9,0:12:2.21:2,0,891	0/0:13,0:11:15.05:0,15,546	0/0:10,0:10:3.01:0,3,108	1/1:11,12:23:15.05:427,15,0	0/0:15,0:15:15.28:0,15,426	0/0:18,0:19:18.06:0,18,578	0/0:17,0:29:17.10:0,17,333	0/1:6,0:10:23.76:24,0,117	0/1:18,1:28:57.12:199,0,57	./.	0/0:14,0:14:15.66:0,16,442	0/0:11,0:12:4.45:0,4,216	0/0:31,0:31:18.06:0,18,711	0/1:8,2:13:1.87:65,0,2	1/1:9,6:14:2.75:89,3,0	0/1:19,6:25:0:0,0,0	0/0:13,0:15:17.91:0,18,686	0/0:14,0:15:30.10:0,30,1166	0/0:9,0:9:18.95:0,19,599	0/0:6,0:6:12.04:0,12,438
chr10	56575444	.	C	CACACAT	3107.65	PASS	AB=0.663;AC=20;AF=0.370;AN=54;BaseQRankSum=-3.404;DP=587;FS=2.671;HRun=0;HaplotypeScore=151.0894;InbreedingCoeff=0.6410;MQ=49.76;MQ0=22;MQRankSum=0.543;QD=11.10;ReadPosRankSum=-3.797;VQSLOD=2.0007;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:71.14:0,71,679	0/0:10,0:10:9.05:0,9,40	./.	0/0:1,0:1:0:0,0,0	0/0:21,0:21:24.91:0,25,346	0/0:24,0:24:44.98:0,45,468	0/0:26,0:25:38.66:0,39,335	1/1:28,0:25:11.24:192,11,0	0/1:14,0:15:35.79:201,0,36	1/1:10,15:23:43.92:484,44,0	1/1:9,0:9:17.79:207,18,0	0/0:23,0:22:14.85:0,15,355	0/0:9,0:9:20.93:0,21,249	0/0:25,0:20:35.86:0,36,388	1/1:29,0:30:18.26:204,18,0	0/0:19,0:17:28.21:0,28,269	0/0:29,0:29:40.92:0,41,353	0/0:17,0:16:28.30:0,28,202	1/1:6,0:23:50.84:519,51,0	0/1:4,19:26:9.90:90,0,10	1/1:7,0:36:12.03:191,12,0	0/0:9,0:9:14.89:0,15,140	0/0:19,0:18:17.98:0,18,172	0/0:33,0:31:35.47:0,35,280	0/1:7,0:24:38.23:38,0,73	1/1:7,11:20:51.74:712,52,0	0/1:5,0:17:46.99:190,0,47	1/1:18,0:16:19.31:277,19,0
chr10	56577244	.	A	AAAAC	9937.04	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-11.969;DP=649;FS=12.971;HRun=0;HaplotypeScore=103.3485;InbreedingCoeff=0.9044;MQ=63.00;MQ0=4;MQRankSum=0.289;QD=37.78;ReadPosRankSum=-1.474;VQSLOD=3.8537;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:1.21:0,1,691	1/1:1,9:10:30.10:704,30,0	0/0:27,0:16:3.01:0,3,48	0/0:22,0:16:7.71:0,8,157	0/0:21,0:21:60.20:0,60,948	1/1:10,17:27:42.14:1005,42,0	1/1:11,9:20:27.09:630,27,0	1/1:25,13:40:63.11:1098,63,0	0/0:19,0:19:36.11:0,36,558	0/0:33,0:33:63.19:0,63,942	0/0:23,0:23:48.16:0,48,750	1/1:6,18:23:45.15:1065,45,0	0/0:27,0:27:62.20:0,62,927	0/0:23,0:23:44.40:0,44,807	0/0:36,0:36:84.26:0,84,1312	1/1:7,16:23:2.71:1105,3,0	1/1:12,26:39:57.20:1369,57,0	1/1:8,9:17:21.07:484,21,0	0/0:12,0:12:20.97:0,21,257	0/0:25,0:25:45.14:0,45,701	0/0:13,0:13:21.06:0,21,316	1/1:7,20:27:54.18:1139,54,0	1/1:6,11:19:30.01:621,30,0	1/1:5,11:16:30.10:718,30,0	0/0:22,0:22:48.16:0,48,767	0/0:25,0:25:69.24:0,69,1114	0/0:20,0:20:54.14:0,54,800	0/0:14,0:14:30.07:0,30,435
chr10	56577452	.	T	TAC	8625.54	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=-16.663;DP=755;FS=5.491;HRun=0;HaplotypeScore=80.9890;InbreedingCoeff=0.9404;MQ=62.99;MQ0=3;MQRankSum=-1.711;QD=32.67;ReadPosRankSum=1.649;VQSLOD=6.9852;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,114,1385	0/0:10,0:10:27.04:0,27,315	0/0:18,0:14:26.66:0,27,289	0/1:14,0:13:2.29:2,0,258	0/0:17,0:17:33:0,33,361	1/1:3,20:23:51.17:836,51,0	1/1:4,13:17:33.11:541,33,0	0/0:25,0:25:30.07:0,30,350	0/0:27,0:27:72.23:0,72,892	0/0:27,0:27:63.18:0,63,760	0/0:29,0:28:75.23:0,75,920	1/1:7,26:34:72.25:1178,72,0	0/0:40,0:40:99:0,111,1361	0/0:19,0:19:51.15:0,51,619	0/0:38,0:38:99:0,99,1225	1/1:9,35:45:84.29:1378,84,0	1/1:5,26:29:10.19:974,10,0	1/1:1,10:11:18.06:295,18,0	0/0:29,0:29:42.21:0,42,639	0/0:32,0:33:84.02:0,84,974	0/0:27,0:27:69.14:0,69,798	1/1:2,25:28:75.25:1207,75,0	1/1:4,20:24:54.18:885,54,0	1/1:5,31:36:81.28:1328,81,0	0/0:28,0:28:32.36:0,32,850	0/0:33,0:33:81.20:0,81,955	0/0:24,0:24:54.17:0,54,669	0/0:20,0:20:51.09:0,51,578
chr10	56580454	.	GT	G	2944.33	PASS	AB=0.941;AC=28;AF=0.500;AN=56;BaseQRankSum=9.057;DP=627;FS=2.178;HRun=16;HaplotypeScore=93.6838;InbreedingCoeff=0.5483;MQ=67.43;MQ0=2;MQRankSum=2.685;QD=8.09;ReadPosRankSum=6.188;VQSLOD=3.0142;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,2:28:8.16:0,8,335	1/1:5,8:13:20.43:125,20,0	0/0:43,0:14:11.43:0,11,75	0/1:39,0:20:5.77:6,0,54	0/0:26,1:27:17.74:0,18,254	1/1:1,14:15:40.05:237,40,0	1/1:1,17:18:49.92:304,50,0	1/1:17,19:37:56.33:336,56,0	0/1:12,3:17:40.88:41,0,92	0/0:19,1:22:22.30:0,22,252	0/0:14,1:16:7.94:0,8,141	1/1:4,21:26:57.66:346,58,0	0/0:18,2:22:2.70:0,3,205	0/1:13,2:16:3.43:3,0,167	0/0:19,2:29:11.48:0,11,281	1/1:6,15:21:43.64:268,44,0	1/1:10,28:39:90.67:553,91,0	1/1:6,18:25:50.17:298,50,0	0/0:28,2:30:3.60:0,4,320	0/0:13,0:14:22.90:0,23,193	0/0:7,0:6:11.99:0,12,101	1/1:1,10:11:23.45:143,23,0	1/1:5,12:17:32.07:197,32,0	1/1:5,13:18:43.86:264,44,0	0/1:15,1:20:13.96:14,0,168	0/0:23,1:24:1.62:0,2,211	0/1:17,1:19:2.05:2,0,210	0/1:12,0:12:3.69:4,0,136
chr10	56583126	.	C	CT	7444.47	PASS	AB=0.717;AC=43;AF=0.768;AN=56;BaseQRankSum=-9.662;DP=431;FS=0.893;HRun=10;HaplotypeScore=49.4556;InbreedingCoeff=0.6660;MQ=69.17;MQ0=0;MQRankSum=-0.380;QD=23.19;ReadPosRankSum=-2.039;VQSLOD=4.8663;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:46:99:0,119,950	1/1:1,6:7:15.04:160,15,0	0/0:4,0:4:8.24:0,8,48	0/1:14,0:14:15.71:16,0,22	0/0:41,0:41:99:0,105,862	1/1:2,10:12:21.05:224,21,0	1/1:2,7:9:24.06:254,24,0	1/1:8,31:40:54.92:942,55,0	1/1:1,10:11:23.80:256,24,0	1/1:3,10:14:33.07:343,33,0	1/1:2,11:13:30.08:320,30,0	1/1:0,12:13:26.94:271,27,0	0/0:10,0:11:29.01:0,29,228	0/0:7,0:7:20.98:0,21,172	0/1:3,8:11:3.59:171,0,4	1/1:2,12:14:14.45:359,14,0	1/1:5,21:26:57.14:608,57,0	1/1:8,15:23:54.14:576,54,0	1/1:2,5:7:15.04:160,15,0	1/1:1,10:11:5.44:263,5,0	1/1:1,8:9:24.06:256,24,0	1/1:0,1:1:3.01:32,3,0	1/1:2,7:9:18.04:192,18,0	0/1:1,3:4:8:55,0,8	1/1:0,23:23:66.17:704,66,0	1/1:0,13:13:39.08:407,39,0	1/1:3,20:24:54:558,54,0	1/1:0,12:12:30.08:320,30,0
chr10	56583734	.	A	AT	1933.53	PASS	AB=0.817;AC=25;AF=0.446;AN=56;BaseQRankSum=-4.203;DP=658;FS=0.886;HRun=15;HaplotypeScore=87.9972;InbreedingCoeff=0.1652;MQ=71.22;MQ0=0;MQRankSum=0.111;QD=4.87;ReadPosRankSum=-2.640;VQSLOD=1.5541;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,3:48:11.20:0,11,342	0/0:3,3:6:2.83:0,3,18	0/0:21,0:19:8.37:0,8,50	0/1:12,0:8:9.59:15,0,10	0/0:30,2:33:17.62:0,18,214	0/1:16,1:19:22.84:23,0,92	0/1:16,2:19:4.04:4,0,159	1/1:21,13:35:16.30:235,16,0	0/1:6,17:23:15.05:105,0,15	1/1:10,7:18:6.71:144,7,0	1/1:5,10:18:17.50:203,18,0	0/0:28,0:28:17.63:0,18,208	0/0:12,0:13:28.45:0,28,166	0/0:16,1:19:1.02:0,1,102	0/1:15,18:34:37.66:249,0,38	0/0:36,0:37:46.25:0,46,388	0/0:26,1:28:10.48:0,10,176	0/1:13,2:18:11.88:12,0,140	1/1:13,4:17:8.92:65,9,0	0/1:9,11:20:42.15:110,0,42	1/1:9,8:17:15.93:128,16,0	0/1:19,2:21:15.32:15,0,143	0/1:15,0:15:13.24:13,0,29	0/0:25,2:28:20.35:0,20,231	1/1:11,15:27:11.69:210,12,0	0/1:16,16:32:3.13:179,0,3	0/1:27,7:34:6.31:254,0,6	1/1:8,9:18:6.57:148,7,0
chr10	56586270	.	GA	G	3187.32	PASS	AB=0.800;AC=35;AF=0.921;AN=38;BaseQRankSum=-2.010;DP=98;FS=13.248;HRun=1;HaplotypeScore=37.2999;InbreedingCoeff=0.1639;MQ=64.35;MQ0=0;MQRankSum=-2.362;QD=33.55;ReadPosRankSum=-0.015;VQSLOD=1.6286;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,10:10:27.05:354,27,0	./.	0/0:1,0:1:3.01:0,3,48	0/1:3,1:4:34.16:38,0,34	./.	./.	1/1:0,16:16:42.14:585,42,0	1/1:0,7:7:21.07:290,21,0	1/1:0,2:2:6.02:79,6,0	1/1:0,4:4:9.03:123,9,0	./.	1/1:0,3:3:9.03:125,9,0	1/1:0,2:2:6.02:84,6,0	1/1:0,2:2:6.02:84,6,0	./.	./.	1/1:0,5:5:15.05:209,15,0	1/1:0,5:5:12:146,12,0	1/1:0,4:4:12.04:168,12,0	./.	1/1:0,19:19:48.07:625,48,0	1/1:0,3:3:2.99:42,3,0	./.	1/1:0,2:2:6.02:83,6,0	1/1:0,1:1:3.01:42,3,0	1/1:0,5:5:12.04:167,12,0	1/1:0,1:1:3.01:42,3,0	./.
chr10	56586286	.	CA	C	3440.93	PASS	AC=34;AF=0.944;AN=36;BaseQRankSum=-1.693;DP=111;FS=0.000;HRun=1;HaplotypeScore=52.2916;InbreedingCoeff=0.1709;MQ=58.04;MQ0=0;MQRankSum=-1.693;QD=32.46;ReadPosRankSum=0.709;VQSLOD=3.1604;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,10:11:27.09:377,27,0	./.	./.	0/0:4,0:4:0.29:0,0,5	./.	./.	1/1:1,25:26:75.23:1023,75,0	1/1:0,4:4:12.04:168,12,0	1/1:0,1:1:3.01:42,3,0	1/1:0,2:2:6.02:84,6,0	./.	1/1:0,2:2:6.02:84,6,0	1/1:0,3:3:9.03:126,9,0	1/1:0,3:3:8.99:104,9,0	./.	./.	1/1:1,10:11:24.05:315,24,0	1/1:0,5:5:12.04:168,12,0	1/1:2,4:6:18.04:218,18,0	./.	1/1:4,14:18:27.01:319,27,0	1/1:1,2:3:6.02:83,6,0	./.	1/1:1,3:4:3.01:42,3,0	1/1:0,1:1:3.01:42,3,0	1/1:0,4:4:12.04:168,12,0	1/1:0,2:2:6.02:81,6,0	./.
chr10	56586323	.	CT	C	6222.48	PASS	AC=40;AF=1.000;AN=40;BaseQRankSum=-1.294;DP=185;FS=0.000;HRun=1;HaplotypeScore=45.4950;InbreedingCoeff=-0.0607;MQ=57.81;MQ0=0;MQRankSum=1.272;QD=34.00;ReadPosRankSum=1.710;VQSLOD=4.3671;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,23:23:66.05:888,66,0	./.	1/1:3,1:4:8.86:88,9,0	./.	./.	1/1:0,2:2:6.02:84,6,0	1/1:0,28:28:69.23:957,69,0	1/1:0,10:10:29.98:348,30,0	1/1:0,3:3:9.03:125,9,0	./.	./.	1/1:0,5:5:9.03:125,9,0	1/1:1,1:2:6.02:81,6,0	1/1:0,4:4:6.02:84,6,0	1/1:0,2:2:6.02:83,6,0	1/1:0,2:2:6.02:83,6,0	1/1:0,16:16:39.13:541,39,0	1/1:0,8:8:23.97:309,24,0	1/1:0,21:21:60.15:793,60,0	./.	1/1:0,39:39:88.25:1158,88,0	1/1:0,2:2:3.01:42,3,0	./.	1/1:0,5:5:12:143,12,0	1/1:0,1:1:3.01:40,3,0	1/1:0,3:3:9.03:125,9,0	1/1:0,3:3:9.03:125,9,0	./.
chr10	56587051	.	G	GGTGT	6610.30	PASS	AB=0.673;AC=32;AF=0.615;AN=52;BaseQRankSum=2.620;DP=754;FS=1.972;HRun=0;HaplotypeScore=142.0066;InbreedingCoeff=0.0142;MQ=65.58;MQ0=11;MQRankSum=-1.529;QD=11.70;ReadPosRankSum=-1.792;VQSLOD=4.4697;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:56:65.01:0,65,1093	1/1:4,1:12:11.90:228,12,0	./.	./.	0/0:24,0:24:24.06:0,24,357	0/1:12,1:23:75.51:101,0,76	0/1:12,0:24:73.99:74,0,127	1/1:42,0:42:35.71:482,36,0	0/1:11,15:28:99:489,0,102	1/1:20,6:30:37.75:497,38,0	0/1:6,0:9:6.52:7,0,42	0/1:14,0:32:81.86:102,0,82	0/0:25,0:30:35.56:0,36,612	0/0:27,0:28:53.20:0,53,790	0/1:12,11:24:14.92:625,0,15	0/1:10,0:20:25.48:65,0,25	0/1:18,0:44:99:194,0,124	0/1:18,0:32:97.29:97,0,279	1/1:12,1:14:11.74:176,12,0	1/1:4,4:11:11.78:228,12,0	1/1:26,17:47:35.59:727,36,0	0/1:7,0:20:54.73:55,0,101	0/1:10,0:15:19.50:20,0,108	0/1:18,0:43:99:229,0,110	1/1:7,9:21:10.16:592,10,0	1/1:22,14:38:6.07:895,6,0	1/1:12,5:19:21.69:417,22,0	1/1:4,4:11:17.53:311,18,0
chr10	56588760	.	GT	G	6280.84	PASS	AB=0.958;AC=46;AF=0.821;AN=56;BaseQRankSum=1.873;DP=588;FS=11.050;HRun=11;HaplotypeScore=66.9677;InbreedingCoeff=0.7837;MQ=69.83;MQ0=1;MQRankSum=0.393;QD=13.48;ReadPosRankSum=2.508;VQSLOD=4.0399;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:52:99:0,118,1152	1/1:3,5:9:17.01:129,17,0	0/1:28,0:13:0.63:1,0,39	0/1:20,0:12:5.66:12,0,6	0/0:25,1:27:34.76:0,35,516	1/1:7,10:17:44.15:351,44,0	1/1:7,11:18:26.94:221,27,0	1/1:20,12:32:56.20:451,56,0	1/1:7,7:14:17.93:148,18,0	1/1:5,16:21:39.92:375,40,0	1/1:5,13:18:38.93:319,39,0	1/1:3,17:21:43.98:351,44,0	0/0:22,0:22:23.52:0,24,390	0/0:20,0:20:42.10:0,42,439	1/1:13,16:29:59.80:485,60,0	1/1:3,19:22:39.41:320,39,0	1/1:5,19:25:23.96:393,24,0	1/1:9,15:24:11.34:225,11,0	1/1:6,11:18:5.98:231,6,0	1/1:2,10:12:26.43:217,26,0	1/1:5,18:23:44.88:364,45,0	1/1:3,5:8:17.97:147,18,0	1/1:2,11:14:13.58:104,14,0	1/1:7,13:20:21.77:371,22,0	1/1:9,12:21:9.18:260,9,0	1/1:8,19:27:59.86:487,60,0	1/1:2,14:16:29.95:246,30,0	1/1:3,4:7:8.75:74,9,0
chr10	56590250	.	T	TTTTTTTG	13646.04	PASS	AC=26;AF=0.481;AN=54;BaseQRankSum=-3.909;DP=641;FS=15.775;HRun=0;HaplotypeScore=168.0166;InbreedingCoeff=0.9526;MQ=65.93;MQ0=5;MQRankSum=-11.210;QD=44.45;ReadPosRankSum=-1.974;VQSLOD=2.9399;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,102,1960	1/1:5,0:5:12.04:352,12,0	./.	0/0:19,0:15:5.66:0,6,95	0/0:24,0:24:51.13:0,51,1002	0/0:11,0:10:12.02:0,12,148	0/0:18,0:14:12.03:0,12,146	1/1:31,0:31:57.85:823,58,0	1/1:24,2:25:57.10:1636,57,0	1/1:29,0:27:54.13:1404,54,0	1/1:33,0:31:64.01:1732,64,0	0/0:23,0:21:14.95:0,15,182	0/0:19,0:19:38.12:0,38,675	0/0:15,0:15:30.01:0,30,447	1/1:32,0:30:30.10:1046,30,0	0/0:32,0:26:38.86:0,39,549	0/0:32,0:31:35.65:0,36,425	0/0:22,0:20:33.11:0,33,477	1/1:19,0:18:15.01:298,15,0	1/1:30,0:28:42.09:1190,42,0	1/1:21,0:17:29.96:567,30,0	0/0:19,0:18:21.07:0,21,310	0/0:26,0:25:44.61:0,45,618	0/0:14,0:12:11.65:0,12,162	1/1:27,1:28:63.17:1733,63,0	1/1:17,1:18:36.06:843,36,0	1/1:28,2:31:60.17:1707,60,0	1/1:3,0:3:9.03:316,9,0
chr10	56590278	.	G	GTTTTTT	8153.87	PASS	AB=0.897;AC=17;AF=0.304;AN=56;BaseQRankSum=0.183;DP=651;FS=10.466;HRun=6;HaplotypeScore=166.1050;InbreedingCoeff=-0.1248;MQ=48.85;MQ0=18;MQRankSum=-9.133;QD=23.36;ReadPosRankSum=-0.410;VQSLOD=0.8168;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:52:99:0,138,2522	1/1:2,1:4:11.91:219,12,0	0/1:18,0:6:16.36:16,0,48	0/1:21,0:9:43.55:44,0,95	0/0:22,0:22:53.20:0,53,1149	0/0:11,0:7:12.04:0,12,161	0/0:16,0:9:12.01:0,12,153	0/1:31,0:29:98.59:383,0,99	0/1:15,7:23:27.73:1000,0,28	0/1:25,7:30:96.43:860,0,96	0/1:23,7:31:54.56:1047,0,55	0/0:18,0:14:17.64:0,18,190	0/0:19,0:19:54.16:0,54,988	0/0:20,0:20:49.61:0,50,765	0/1:8,5:22:30.68:506,0,31	0/0:29,0:19:44.21:0,44,616	0/0:28,0:27:44.15:0,44,488	0/0:20,0:15:33.11:0,33,516	0/1:22,2:22:99:176,0,330	0/1:17,7:23:95.85:769,0,96	0/1:20,0:16:99:193,0,108	0/0:20,0:17:19.52:0,20,382	0/0:31,0:29:64.95:0,65,766	0/0:15,0:12:22.39:0,22,205	0/1:17,4:28:99:1085,0,134	0/1:21,1:22:99:512,0,196	0/1:23,5:32:99:1116,0,182	1/1:3,2:4:9.03:228,9,0
chr10	56590279	.	G	GGT	6330.99	PASS	AB=0.700;AC=32;AF=0.571;AN=56;BaseQRankSum=0.515;DP=661;FS=15.821;HRun=0;HaplotypeScore=134.0317;InbreedingCoeff=0.1001;MQ=48.59;MQ0=18;MQRankSum=-2.912;QD=12.46;ReadPosRankSum=6.461;VQSLOD=3.1267;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:53:99:0,146,1871	0/1:2,1:4:5.05:94,0,5	0/0:17,0:6:4.54:0,5,79	0/1:20,0:8:13.82:14,0,62	0/0:19,0:22:60.11:0,60,780	1/1:1,10:8:12:184,12,0	1/1:2,14:10:14.92:211,15,0	0/1:22,1:32:99:538,0,113	0/1:9,7:24:84.17:135,0,84	0/1:18,7:30:99:156,0,108	0/1:18,7:31:99:99,0,143	1/1:3,14:15:14.95:250,15,0	0/0:17,0:19:53.42:0,53,723	0/0:16,0:19:47.33:0,47,603	0/1:14,5:23:44.41:100,0,44	1/1:2,26:20:43.03:793,43,0	1/1:5,19:25:41.97:650,42,0	1/1:4,17:16:33.58:656,34,0	0/1:13,2:23:20.68:21,0,241	0/1:6,7:24:65.56:139,0,66	0/0:13,1:16:10.28:0,10,139	1/1:3,17:18:26.29:562,26,0	1/1:2,28:30:68.73:1106,69,0	1/1:2,11:12:23.98:342,24,0	0/1:17,4:28:62.23:62,0,276	0/1:13,1:22:65.53:66,0,147	0/1:17,4:32:89.23:89,0,221	1/1:2,1:4:8.90:63,9,0
chr10	56590284	.	T	TGG	1983.27	PASS	AB=0.965;AC=14;AF=0.250;AN=56;BaseQRankSum=10.943;DP=636;FS=0.000;HRun=0;HaplotypeScore=138.5788;InbreedingCoeff=-0.1962;MQ=48.28;MQ0=17;MQRankSum=-10.158;QD=6.63;ReadPosRankSum=-0.212;VQSLOD=3.0845;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:52:99:0,144,2167	1/1:3,0:4:7.12:73,7,0	0/0:17,0:6:10.93:0,11,123	0/0:20,0:8:0.75:0,1,114	0/0:23,0:23:60.17:0,60,886	0/0:12,0:8:11.88:0,12,107	0/0:14,0:7:11.10:0,11,100	0/1:24,0:25:29.81:30,0,501	0/1:21,1:21:99:278,0,114	0/1:26,1:25:99:204,0,333	0/1:29,1:27:99:296,0,169	0/0:17,0:13:11.95:0,12,135	0/0:19,0:19:54.18:0,54,827	0/0:18,0:18:45.12:0,45,650	0/1:27,0:25:99:99,0,173	0/0:30,0:20:42.13:0,42,361	0/0:25,0:24:32.78:0,33,323	0/0:20,0:15:39.33:0,39,281	0/1:24,2:23:60.67:61,0,549	0/1:23,0:21:99:141,0,207	0/1:20,0:15:84.83:85,0,249	0/0:21,0:18:36.01:0,36,314	0/0:30,0:28:62.74:0,63,520	0/0:18,0:15:21.03:0,21,245	0/1:28,1:29:99:401,0,301	0/1:21,1:20:99:170,0,336	0/1:31,2:33:99:277,0,342	0/1:9,0:8:25.15:25,0,115
chr10	56591703	.	AC	A	707.50	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.029;DP=583;FS=21.968;HRun=2;HaplotypeScore=76.2517;InbreedingCoeff=0.9580;MQ=92.01;MQ0=0;MQRankSum=-5.264;QD=28.30;ReadPosRankSum=-2.048;VQSLOD=1.6907;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,144,2046	1/1:0,5:5:11.98:130,12,0	0/0:30,0:30:79.10:0,79,1089	0/0:39,0:38:80.80:0,81,1110	0/0:17,0:17:51.17:0,51,763	0/0:8,0:8:24.08:0,24,359	0/0:22,0:22:63.17:0,63,881	1/1:2,18:20:57.17:694,57,0	0/0:22,0:22:66.21:0,66,964	0/0:32,0:32:93.32:0,93,1394	0/0:21,0:21:63.20:0,63,924	0/0:11,0:11:32.90:0,33,455	0/0:19,0:19:57.18:0,57,833	0/0:21,0:21:63.21:0,63,941	0/0:34,0:34:99:0,102,1486	0/0:12,0:12:33.11:0,33,494	0/0:13,0:13:33.11:0,33,484	0/0:14,0:14:33.07:0,33,469	0/0:17,0:17:51.15:0,51,727	0/0:29,0:29:84.27:0,84,1239	0/0:22,0:22:66.17:0,66,963	0/0:16,0:16:41.97:0,42,592	0/0:11,0:11:30.10:0,30,428	0/0:8,0:8:11.95:0,12,150	0/0:30,0:30:90.17:0,90,1272	0/0:32,0:32:96.33:0,96,1435	0/0:22,0:22:66.21:0,66,963	0/0:6,0:6:14.98:0,15,140
chr10	56591755	.	A	AG	320.87	PASS	AB=0.759;AC=5;AF=0.089;AN=56;BaseQRankSum=9.149;DP=575;FS=3.152;HRun=4;HaplotypeScore=75.0263;InbreedingCoeff=-0.0996;MQ=62.34;MQ0=1;MQRankSum=-8.882;QD=3.53;ReadPosRankSum=-0.255;VQSLOD=-0.5251;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,102,1157	0/1:6,10:16:99:187,0,156	0/0:19,0:15:31.63:0,32,344	0/0:20,0:14:18.04:0,18,189	0/0:23,0:23:66.17:0,66,739	0/1:18,5:23:54.61:55,0,480	0/0:15,1:16:14.48:0,14,338	0/0:14,0:13:36.10:0,36,408	0/0:20,0:20:51.14:0,51,579	0/0:21,0:21:55.06:0,55,643	0/0:24,0:24:69.20:0,69,782	0/0:22,1:23:34.96:0,35,606	0/0:20,0:20:60.16:0,60,670	0/0:19,0:18:51.15:0,51,578	0/0:32,0:32:87.23:0,87,977	0/1:10,2:12:14.27:14,0,301	0/0:16,0:16:18.15:0,18,387	0/0:11,0:11:30.04:0,30,325	0/0:21,0:21:60.17:0,60,681	0/0:33,0:33:93.24:0,93,1046	0/0:16,0:16:39.11:0,39,442	0/1:15,4:19:35.39:35,0,422	0/1:11,10:21:99:146,0,283	0/0:8,1:9:13.79:0,14,228	0/0:20,0:20:54.13:0,54,597	0/0:31,0:31:90.26:0,90,1021	0/0:24,0:24:69.20:0,69,782	0/0:13,0:13:39.11:0,39,442
chr10	56591760	.	T	TGGGG	1997.92	PASS	AB=0.827;AC=7;AF=0.125;AN=56;BaseQRankSum=10.027;DP=606;FS=6.157;HRun=4;HaplotypeScore=115.2460;InbreedingCoeff=-0.1311;MQ=59.49;MQ0=2;MQRankSum=-9.640;QD=13.68;ReadPosRankSum=0.145;VQSLOD=-0.3299;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,108,2170	0/1:6,10:16:99:641,0,328	0/0:22,0:15:42.04:0,42,718	0/0:21,0:12:21.02:0,21,344	0/0:26,0:26:78.22:0,78,1483	0/1:19,5:24:99:275,0,981	0/1:17,1:17:9.11:9,0,760	0/0:14,0:13:36.12:0,36,752	0/0:21,0:21:57.15:0,57,1116	0/0:21,0:21:60.20:0,60,1222	0/0:26,0:26:75.20:0,75,1466	0/1:25,1:26:1.61:2,0,1176	0/0:20,0:20:60.19:0,60,1219	0/0:19,0:18:54.18:0,54,1081	0/0:30,0:30:90.31:0,90,1837	0/1:14,2:16:99:270,0,603	0/0:17,0:17:45.04:0,45,835	0/0:12,0:12:36.04:0,36,663	0/0:23,0:23:69.22:0,69,1383	0/0:33,0:33:96.31:0,96,1934	0/0:16,0:16:39.13:0,39,787	0/1:19,4:23:99:289,0,887	0/1:13,10:23:99:636,0,564	0/0:10,1:11:27.08:0,27,506	0/0:22,0:22:63.20:0,63,1228	0/0:33,0:33:99:0,99,1961	0/0:24,0:24:72.25:0,72,1475	0/0:13,0:13:39.13:0,39,817
chr10	56593626	.	C	CT	3901.56	PASS	AB=0.768;AC=19;AF=0.339;AN=56;BaseQRankSum=0.164;DP=634;FS=4.343;HRun=11;HaplotypeScore=97.1833;InbreedingCoeff=0.6311;MQ=56.76;MQ0=16;MQRankSum=-2.156;QD=15.80;ReadPosRankSum=-0.645;VQSLOD=3.8316;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:39,1:40:77.13:0,77,782	0/0:9,0:9:22.94:0,23,166	0/0:24,0:8:4.61:0,5,44	0/1:9,0:2:0:0,0,0	0/0:35,0:35:86.12:0,86,658	0/0:16,0:16:32.81:0,33,251	0/0:24,0:24:47.78:0,48,372	0/0:35,0:31:56.06:0,56,494	1/1:6,10:16:38.99:367,39,0	1/1:11,14:24:10.57:444,11,0	1/1:8,18:27:42.54:574,43,0	0/0:25,1:26:11.81:0,12,272	0/0:20,0:20:47.80:0,48,369	0/0:16,1:17:2.39:0,2,202	1/1:13,17:29:33.47:504,33,0	0/0:26,1:27:37.24:0,37,452	0/0:36,0:35:82.68:0,83,630	0/0:15,0:15:35.82:0,36,275	0/1:13,8:14:9.16:270,0,9	0/1:10,9:20:2.78:298,0,3	0/1:6,4:10:8.21:107,0,8	0/0:18,1:19:17.40:0,17,317	0/0:16,1:17:38.84:0,39,302	0/0:25,1:25:16.42:0,16,301	1/1:8,12:20:46.37:404,46,0	1/1:14,14:25:39.07:395,39,0	1/1:18,11:28:6.40:423,6,0	0/1:7,4:11:25.60:115,0,26
chr10	56593642	.	C	CT	10144.63	PASS	AB=0.583;AC=43;AF=0.768;AN=56;BaseQRankSum=-3.704;DP=626;FS=10.397;HRun=8;HaplotypeScore=76.5569;InbreedingCoeff=0.8368;MQ=56.63;MQ0=4;MQRankSum=-3.685;QD=20.83;ReadPosRankSum=-1.174;VQSLOD=3.9752;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:93.02:0,93,846	1/1:0,9:9:21.06:236,21,0	0/0:21,0:8:12.84:0,13,102	0/0:11,0:3:1.47:0,1,17	0/0:33,0:33:74.36:0,74,657	1/1:3,18:21:42.12:485,42,0	0/1:6,15:21:43.18:305,0,43	1/1:12,16:27:48.12:540,48,0	1/1:5,13:17:36.11:415,36,0	1/1:12,16:27:43.94:482,44,0	1/1:13,13:26:48.14:542,48,0	1/1:6,23:29:48.14:548,48,0	0/0:19,0:19:39:0,39,356	0/0:16,0:16:39.01:0,39,356	1/1:11,16:26:22.07:475,22,0	1/1:5,23:27:63.19:727,63,0	1/1:8,35:41:96.21:1077,96,0	1/1:4,14:18:45.09:494,45,0	1/1:10,6:12:12.02:129,12,0	1/1:4,17:21:47.63:524,48,0	1/1:1,7:8:15.04:173,15,0	1/1:2,14:16:36.06:400,36,0	1/1:3,15:18:33.10:381,33,0	1/1:7,22:29:41.15:456,41,0	1/1:5,13:17:39.09:431,39,0	1/1:7,20:25:54.13:601,54,0	1/1:8,20:27:26.79:551,27,0	1/1:4,5:9:15.04:173,15,0
chr10	56596158	.	A	AC	20020.11	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-15.213;DP=767;FS=0.332;HRun=5;HaplotypeScore=70.3849;InbreedingCoeff=0.9984;MQ=79.53;MQ0=0;MQRankSum=-2.901;QD=33.76;ReadPosRankSum=1.474;VQSLOD=5.2867;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,111,1192	1/1:1,8:9:21.07:276,21,0	0/0:14,0:14:36.09:0,36,386	0/0:29,0:29:65.56:0,66,626	0/0:21,0:21:51.13:0,51,548	1/1:2,23:25:63.20:829,63,0	1/1:4,26:30:72.23:947,72,0	1/1:5,34:39:99:1218,99,0	1/1:4,36:40:99:1421,108,0	1/1:0,21:21:57.16:733,57,0	1/1:2,16:18:42.14:551,42,0	1/1:1,35:36:99:1341,102,0	0/0:22,0:22:57.14:0,57,612	0/0:45,0:45:99:0,132,1418	1/1:4,32:36:87.28:1145,87,0	1/1:2,38:40:99:1461,111,0	1/1:2,35:37:99:1342,102,0	1/1:2,15:17:45.15:592,45,0	1/1:8,9:17:27.09:355,27,0	1/1:2,9:11:24.08:316,24,0	1/1:1,57:58:99:1934,147,0	1/1:4,16:20:51.16:662,51,0	1/1:1,15:16:42.14:553,42,0	1/1:2,25:27:78.25:1024,78,0	1/1:0,21:21:63.20:829,63,0	1/1:4,30:34:90.27:1166,90,0	1/1:1,29:30:72.23:947,72,0	1/1:2,9:11:30.08:378,30,0
chr10	56601378	.	CAAAG	C	9114.92	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=14.629;DP=682;FS=35.920;HRun=0;HaplotypeScore=117.2209;InbreedingCoeff=0.9897;MQ=79.62;MQ0=2;MQRankSum=-4.588;QD=39.80;ReadPosRankSum=5.310;VQSLOD=2.9294;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:87.30:0,87,2228	0/0:9,0:9:24.08:0,24,616	0/0:21,0:20:54.16:0,54,1275	0/0:20,0:19:54.19:0,54,1318	0/0:28,0:28:75.73:0,76,1931	1/1:2,15:16:33.11:600,33,0	1/1:4,28:32:78.27:1417,78,0	0/0:31,0:31:81.27:0,81,2039	0/0:24,0:24:69.22:0,69,1752	0/0:19,0:19:51.18:0,51,1322	0/0:30,0:30:81.28:0,81,2061	1/1:4,21:25:48.16:872,48,0	0/0:29,0:29:78.25:0,78,1987	0/0:26,0:26:72.25:0,72,1857	0/0:36,0:36:99:0,108,2824	1/1:2,32:33:8.70:1448,9,0	1/1:4,24:26:63.22:1144,63,0	1/1:2,17:18:42.14:763,42,0	0/0:18,0:18:51.17:0,51,1284	0/0:29,0:29:81.28:0,81,2065	0/0:24,0:24:69.24:0,69,1774	1/1:1,21:22:57.20:1036,57,0	1/1:1,26:27:54.18:979,54,0	1/1:1,24:24:46.68:856,47,0	0/0:20,0:20:57.18:0,57,1440	0/0:26,0:26:72.25:0,72,1856	0/0:22,0:22:63.21:0,63,1512	0/0:10,0:10:27.09:0,27,707
chr10	56601808	.	G	GAAA	1359.89	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-2.026;DP=518;FS=40.510;HRun=10;HaplotypeScore=83.6683;InbreedingCoeff=0.8398;MQ=84.45;MQ0=5;MQRankSum=-2.290;QD=36.75;ReadPosRankSum=-3.504;VQSLOD=-0.3267;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:9:16.35:0,16,216	1/1:1,0:4:8.97:69,9,0	0/0:55,0:32:10.15:0,10,248	0/0:43,0:29:1.61:0,2,149	0/0:27,0:27:70.51:0,71,843	0/0:13,0:13:33.10:0,33,401	0/0:10,0:11:33:0,33,356	1/1:6,23:33:80.90:1405,81,0	0/0:7,0:7:21.05:0,21,244	0/0:14,0:14:42.13:0,42,507	0/0:17,0:17:51.16:0,51,619	0/0:17,0:17:45.10:0,45,547	0/0:11,0:11:33.09:0,33,389	0/0:15,0:15:42.08:0,42,496	0/0:14,0:14:42.11:0,42,490	0/0:23,0:24:63.10:0,63,745	0/0:26,0:28:76.25:0,76,890	0/0:13,0:13:36.08:0,36,437	0/0:15,0:15:32.81:0,33,376	0/0:17,0:17:45.12:0,45,546	0/0:9,0:9:21.03:0,21,255	0/0:13,0:13:30.04:0,30,365	0/0:17,0:17:45.13:0,45,546	0/0:14,0:15:36.01:0,36,401	0/0:19,0:19:48.08:0,48,556	0/0:17,0:17:48.11:0,48,568	0/0:24,0:28:65.94:0,66,813	0/0:9,0:9:27.08:0,27,327
chr10	56602700	.	C	CG	11109.08	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-16.080;DP=747;FS=13.309;HRun=1;HaplotypeScore=73.5985;InbreedingCoeff=0.9987;MQ=88.32;MQ0=0;MQRankSum=-2.617;QD=39.25;ReadPosRankSum=-0.978;VQSLOD=3.7743;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,120,1557	0/0:9,0:9:24.08:0,24,311	0/0:31,0:31:78.13:0,78,913	0/0:29,0:30:53.34:0,53,942	0/0:26,0:26:75.24:0,75,973	0/0:28,0:28:81.26:0,81,1050	0/0:21,0:21:60.18:0,60,761	0/0:33,0:33:96.29:0,96,1222	1/1:0,14:14:39.13:584,39,0	1/1:1,26:27:78.25:1146,78,0	1/1:2,9:11:20.83:314,21,0	0/0:43,0:43:99:0,129,1674	0/0:19,0:19:51.17:0,51,662	0/0:35,0:35:99:0,102,1324	1/1:2,28:30:78.25:1148,78,0	0/0:33,0:33:96.31:0,96,1245	0/0:33,0:33:99:0,99,1285	0/0:20,0:20:60.14:0,60,745	1/1:1,23:24:66.18:962,66,0	1/1:0,19:19:57.19:854,57,0	1/1:3,57:60:99:2237,151,0	0/0:12,0:12:36.12:0,36,467	0/0:11,0:11:30.10:0,30,389	0/0:37,0:37:99:0,102,1307	1/1:2,16:18:45.15:674,45,0	1/1:0,34:34:99:1437,99,0	1/1:0,34:34:93.32:1393,93,0	1/1:0,12:12:24.08:359,24,0
chr10	56603725	.	CA	C	796.84	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.143;DP=646;FS=2.979;HRun=9;HaplotypeScore=65.1977;InbreedingCoeff=0.9915;MQ=79.28;MQ0=0;MQRankSum=0.003;QD=20.97;ReadPosRankSum=-2.627;VQSLOD=3.3322;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,126,1423	1/1:2,8:10:27.01:247,27,0	0/0:22,0:20:40.93:0,41,447	0/0:28,0:25:38.92:0,39,395	0/0:30,0:30:78.01:0,78,870	0/0:29,0:29:81.24:0,81,935	0/0:15,0:15:39.12:0,39,450	1/1:3,25:28:74.98:671,75,0	0/0:12,0:13:35.92:0,36,378	0/0:19,0:19:42.10:0,42,472	0/0:16,0:16:42.12:0,42,484	0/0:25,0:25:66.20:0,66,762	0/0:18,0:18:51.15:0,51,589	0/0:20,0:20:51.15:0,51,589	0/0:32,0:32:93.20:0,93,1038	0/0:37,1:38:74.82:0,75,1105	0/0:16,0:16:42.12:0,42,476	0/0:18,0:18:51.15:0,51,588	0/0:19,1:20:17.66:0,18,455	0/0:33,0:33:87.22:0,87,975	0/0:18,0:20:47.96:0,48,523	0/0:22,0:22:63.17:0,63,717	0/0:24,0:24:60.16:0,60,682	0/0:25,0:25:69.18:0,69,776	0/0:19,1:20:23.68:0,24,519	0/0:27,0:27:75.22:0,75,866	0/0:26,0:26:75.21:0,75,856	0/0:9,0:9:21.03:0,21,219
chr10	56605403	.	CA	C	294.46	PASS	AB=0.800;AC=4;AF=0.071;AN=56;BaseQRankSum=3.983;DP=500;FS=13.308;HRun=10;HaplotypeScore=101.6494;InbreedingCoeff=0.4991;MQ=59.28;MQ0=4;MQRankSum=-2.790;QD=8.66;ReadPosRankSum=0.260;VQSLOD=0.8822;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:21:44.95:0,45,478	0/1:2,2:4:4.71:42,0,5	0/0:34,0:16:24.50:0,25,241	0/0:28,1:17:14.86:0,15,196	0/0:23,1:28:36.91:0,37,555	0/0:14,0:14:19.21:0,19,214	0/1:13,1:14:8.60:9,0,154	1/1:2,14:16:37.16:355,37,0	0/0:14,0:13:35.53:0,36,359	0/0:22,0:22:56.97:0,57,588	0/0:16,0:15:35.66:0,36,347	0/0:23,0:23:47.25:0,47,590	0/0:18,0:18:38.87:0,39,464	0/0:10,0:10:30.08:0,30,332	0/0:16,0:16:41.68:0,42,430	0/0:24,0:25:59.82:0,60,598	0/0:30,0:30:45.84:0,46,579	0/0:20,1:21:30.70:0,31,524	0/0:12,1:13:7.02:0,7,297	0/0:8,0:8:24.06:0,24,259	0/0:10,0:10:26.66:0,27,295	0/0:20,1:21:30.88:0,31,528	0/0:14,0:14:30.05:0,30,319	0/0:16,1:16:6.87:0,7,286	0/0:18,1:19:22.14:0,22,457	0/0:13,0:14:35.44:0,35,343	0/0:19,2:21:10.22:0,10,541	0/0:6,0:6:18.03:0,18,189
chr10	56605767	.	G	GA	1240.70	PASS	AB=0.863;AC=26;AF=0.464;AN=56;BaseQRankSum=-1.679;DP=521;FS=5.950;HRun=16;HaplotypeScore=68.7347;InbreedingCoeff=0.0653;MQ=69.13;MQ0=3;MQRankSum=0.516;QD=3.43;ReadPosRankSum=-1.365;VQSLOD=-0.0970;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:32,1:35:6.09:6,0,187	1/1:4,2:8:19.91:115,20,0	0/0:39,0:18:13.03:0,13,65	0/0:11,0:7:3.75:0,4,19	0/1:24,0:24:1.62:2,0,78	0/1:19,0:20:19.60:20,0,26	0/1:7,0:9:6.63:7,0,39	1/1:13,2:30:35.70:201,36,0	1/1:4,12:16:5.99:48,6,0	0/1:10,5:15:1.49:76,0,1	0/1:5,12:17:12.51:74,0,13	0/1:19,1:20:8.60:9,0,69	0/0:12,0:14:23.59:0,24,96	0/1:13,0:13:27.83:28,0,48	1/1:18,0:18:21.81:165,22,0	0/1:14,0:14:15.57:16,0,28	0/0:27,1:31:23.35:0,23,166	0/0:12,1:13:6.07:0,6,108	1/1:13,11:24:4.99:156,5,0	1/1:4,10:15:20.59:131,21,0	0/1:10,6:16:5:48,0,5	0/0:15,0:15:15.85:0,16,81	0/0:15,0:15:10.35:0,10,143	0/0:19,0:19:23.75:0,24,113	0/1:16,0:17:21.76:92,0,22	0/1:14,4:19:19.15:75,0,19	0/1:10,12:22:17.93:76,0,18	0/1:6,2:10:1.84:71,0,2
chr10	56607044	.	CGTGT	C	11327.72	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=9.302;DP=782;FS=0.844;HRun=0;HaplotypeScore=180.3346;InbreedingCoeff=0.8847;MQ=56.70;MQ0=6;MQRankSum=-4.310;QD=20.52;ReadPosRankSum=-0.634;VQSLOD=4.6615;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:33:59.39:0,59,1140	0/0:7,0:10:12.04:0,12,230	0/0:23,0:10:3.01:0,3,67	0/0:34,0:14:3.01:0,3,70	0/0:30,1:34:34.60:0,35,1518	1/1:5,0:11:18.02:168,18,0	1/1:16,0:27:13.09:183,13,0	0/0:23,0:27:28.87:0,29,513	1/1:10,17:27:48.13:770,48,0	1/1:13,15:28:47.82:744,48,0	1/1:4,16:22:51.16:775,51,0	1/1:14,0:37:62.96:570,63,0	0/0:33,0:34:68.97:0,69,1499	0/0:32,0:33:62.95:0,63,1442	1/1:13,29:44:84.27:1308,84,0	1/1:10,0:39:71.76:643,72,0	1/1:9,0:15:6.48:57,6,0	1/1:8,0:13:15.02:140,15,0	1/1:11,7:19:8.37:276,8,0	1/1:10,19:30:60.16:915,60,0	1/1:30,24:56:44.22:987,44,0	1/1:8,0:26:33.47:294,33,0	1/1:5,0:21:44.13:382,44,0	1/1:16,0:28:6.74:42,7,0	1/1:7,15:22:33.11:530,33,0	1/1:17,25:43:81.24:1250,81,0	1/1:12,15:29:51.16:778,51,0	1/1:3,11:15:23.59:517,24,0
chr10	56607255	.	TA	T	4148.17	PASS	AB=0.591;AC=41;AF=0.732;AN=56;BaseQRankSum=2.178;DP=611;FS=6.690;HRun=15;HaplotypeScore=83.9878;InbreedingCoeff=0.6192;MQ=72.65;MQ0=2;MQRankSum=-0.290;QD=9.14;ReadPosRankSum=4.495;VQSLOD=3.0373;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,2:33:25.94:0,26,472	1/1:4,1:5:2.93:19,3,0	0/0:39,2:29:3.93:0,4,133	0/0:31,0:18:11.85:0,12,73	0/0:15,3:18:1.74:0,2,128	1/1:4,20:25:40.39:256,40,0	1/1:5,13:22:34.59:196,35,0	0/1:10,14:27:18.79:210,0,19	1/1:15,15:33:3.40:220,3,0	0/1:7,16:24:0.03:193,0,0	1/1:5,7:13:16.75:102,17,0	1/1:4,12:16:20.61:134,21,0	0/0:19,0:19:20.98:0,21,179	0/0:14,1:15:4.72:0,5,163	1/1:9,10:21:27.63:165,28,0	1/1:11,18:30:20.90:295,21,0	1/1:8,16:24:38.35:250,38,0	1/1:4,11:17:36.55:223,37,0	1/1:4,16:22:45.18:275,45,0	1/1:11,15:26:26.37:187,26,0	1/1:8,9:18:22.62:140,23,0	1/1:11,14:26:25.38:159,25,0	1/1:6,12:20:13.12:194,13,0	1/1:3,17:20:38.25:250,38,0	1/1:3,10:14:28.54:179,29,0	0/1:6,15:23:3.36:225,0,3	1/1:5,17:23:31.26:198,31,0	1/1:1,4:5:11.81:77,12,0
chr10	56609073	.	CAT	C	488.33	PASS	AB=1.000;AC=8;AF=0.143;AN=56;BaseQRankSum=1.335;DP=589;FS=12.690;HRun=0;HaplotypeScore=114.1212;InbreedingCoeff=0.2923;MQ=55.72;MQ0=5;MQRankSum=-1.479;QD=4.07;ReadPosRankSum=-4.915;VQSLOD=-0.0642;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:32:63.09:0,63,576	1/1:1,5:6:3.01:45,3,0	0/0:20,0:9:13.36:0,13,210	0/0:23,0:15:22.05:0,22,323	0/0:19,0:19:42.42:0,42,409	0/1:32,0:31:15.63:16,0,324	0/1:20,0:17:15.94:16,0,214	1/1:30,0:28:64:531,64,0	0/0:22,0:22:8.45:0,8,173	0/0:24,0:24:56.80:0,57,490	0/0:11,0:11:14.98:0,15,124	0/0:24,0:24:35.49:0,35,281	0/0:21,0:21:2.88:0,3,316	0/1:16,0:16:4.73:5,0,315	0/0:29,0:28:23.75:0,24,139	0/0:44,0:40:38.55:0,39,483	0/0:18,0:18:16.26:0,16,146	0/0:8,0:8:12.14:0,12,165	0/0:7,0:7:0.81:0,1,121	0/0:21,0:21:38.91:0,39,316	0/0:36,0:35:62.39:0,62,497	0/0:10,0:10:8.99:0,9,74	0/0:16,0:14:29.92:0,30,284	0/1:16,0:16:3.95:4,0,93	0/0:21,0:20:42.80:0,43,350	0/0:19,0:19:50.67:0,51,405	0/0:30,0:30:20.11:0,20,210	0/0:12,0:12:10.18:0,10,120
chr10	56609075	.	TACACAC	T	1068.89	PASS	AB=1.000;AC=17;AF=0.340;AN=50;BaseQRankSum=1.394;DP=593;FS=0.000;HRun=0;HaplotypeScore=145.0011;InbreedingCoeff=0.6604;MQ=53.05;MQ0=6;MQRankSum=-3.393;QD=5.72;ReadPosRankSum=1.808;VQSLOD=1.7388;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:32:24.06:0,24,568	0/0:6,0:6:3.01:0,3,44	./.	./.	0/0:18,0:18:21.07:0,21,539	0/0:32,0:31:14.96:0,15,245	0/0:19,0:16:12.02:0,12,164	0/0:34,0:31:27.55:0,28,278	1/1:12,11:24:15.05:263,15,0	1/1:23,0:23:2.57:29,3,0	0/0:7,5:12:0:0,0,0	0/0:24,0:24:21.93:0,22,342	0/0:19,0:23:18.91:0,19,435	0/0:15,0:15:27.09:0,27,693	1/1:16,10:28:24.08:443,24,0	0/0:41,0:37:23.71:0,24,382	0/0:17,0:17:11.16:0,11,147	0/0:8,0:8:12.04:0,12,266	1/1:7,0:7:3.01:51,3,0	1/1:13,8:21:2.79:37,3,0	0/0:30,8:37:5.89:0,6,94	./.	0/0:18,0:16:12.04:0,12,266	0/0:16,0:16:6.01:0,6,109	1/1:19,1:19:8.80:100,9,0	0/1:21,0:21:37.60:38,0,85	1/1:17,11:30:11.48:166,11,0	1/1:10,0:12:5.29:111,5,0
chr10	56609213	.	T	TTTCTG	13853.02	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-14.527;DP=629;FS=1.546;HRun=0;HaplotypeScore=107.6751;InbreedingCoeff=0.9801;MQ=92.55;MQ0=1;MQRankSum=-1.306;QD=59.46;ReadPosRankSum=-0.019;VQSLOD=5.4495;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:90.23:0,90,1631	0/0:6,0:6:12.01:0,12,196	0/0:31,0:31:37.04:0,37,849	0/0:29,0:29:49.91:0,50,792	0/0:22,0:22:60.17:0,60,1091	0/0:21,0:21:48.14:0,48,891	0/0:24,0:23:57.17:0,57,1034	0/0:24,0:24:42.11:0,42,713	1/1:3,17:21:57.20:1607,57,0	1/1:4,23:27:75.17:2056,75,0	1/1:4,19:23:48.16:1407,48,0	0/0:25,0:25:51.17:0,51,984	0/0:24,0:24:57.18:0,57,1065	0/0:28,0:28:69.21:0,69,1264	1/1:4,21:26:60.21:1757,60,0	0/0:29,0:29:66.01:0,66,1212	0/0:30,0:30:81.23:0,81,1451	0/0:15,0:15:39.13:0,39,753	1/1:6,11:21:51.09:1069,51,0	1/1:1,10:12:27.02:683,27,0	1/1:3,13:18:27.09:751,27,0	0/0:22,0:22:54.17:0,54,1011	0/0:13,0:13:30.10:0,30,572	0/0:18,0:18:51.17:0,51,970	1/1:5,13:20:39.13:1109,39,0	1/1:7,18:26:63.19:1718,63,0	1/1:4,24:31:54.07:1521,54,0	1/1:2,5:7:6.02:176,6,0
chr10	56609561	.	AC	A	4722.56	PASS	AB=0.862;AC=28;AF=0.500;AN=56;BaseQRankSum=10.951;DP=535;FS=8.236;HRun=10;HaplotypeScore=74.7609;InbreedingCoeff=0.4460;MQ=74.21;MQ0=8;MQRankSum=-2.150;QD=13.30;ReadPosRankSum=2.163;VQSLOD=4.5151;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:21:13.53:0,14,374	1/1:1,6:7:20.95:175,21,0	0/1:24,0:15:22.48:22,0,75	0/0:38,0:22:25.46:0,25,304	0/1:13,6:19:19.09:19,0,244	1/1:3,17:20:53.93:465,54,0	1/1:4,27:31:74.92:651,75,0	0/1:12,7:19:8.47:89,0,8	0/0:12,0:12:24.05:0,24,257	0/0:11,0:11:21.06:0,21,232	0/0:11,0:11:21.04:0,21,215	1/1:1,20:21:53.97:469,54,0	0/0:23,3:26:37.08:0,37,621	0/1:20,4:24:44.05:44,0,460	0/1:24,4:28:29.10:29,0,577	1/1:3,18:21:53.95:468,54,0	1/1:4,21:25:62.96:547,63,0	1/1:4,19:23:53.95:468,54,0	0/1:12,5:18:93.91:94,0,192	0/1:9,0:9:8.04:8,0,101	0/0:18,2:20:13.94:0,14,368	1/1:0,10:10:29.99:260,30,0	1/1:1,11:12:26.99:234,27,0	1/1:2,26:28:77.97:677,78,0	0/0:14,1:15:7.05:0,7,296	0/0:20,0:20:20.06:0,20,190	0/1:14,2:16:4:4,0,407	0/0:6,0:6:15.03:0,15,157
chr10	56610098	.	T	TTCAC	10960.69	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-10.805;DP=747;FS=12.286;HRun=0;HaplotypeScore=113.0377;InbreedingCoeff=0.9782;MQ=66.12;MQ0=3;MQRankSum=0.660;QD=30.96;ReadPosRankSum=-0.822;VQSLOD=3.9839;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:37:75.23:0,75,1153	1/1:9,0:12:6:76,6,0	0/0:29,0:22:12.03:0,12,168	0/0:24,0:20:16.28:0,16,219	0/0:24,0:24:39.13:0,39,621	0/0:28,0:28:51.13:0,51,740	0/0:32,0:32:48.13:0,48,694	1/1:39,0:39:42.13:696,42,0	1/1:13,24:39:54.19:1288,54,0	1/1:12,16:29:51.16:1094,51,0	1/1:9,14:26:36.12:822,36,0	0/0:19,0:19:48.15:0,48,743	0/0:19,0:19:39.09:0,39,555	0/0:25,0:25:48.13:0,48,696	1/1:11,23:35:36.01:863,36,0	0/0:29,0:29:54.17:0,54,821	0/0:27,0:27:54.16:0,54,834	0/0:23,0:23:48.16:0,48,761	1/1:16,13:30:46.01:926,46,0	1/1:9,14:26:42.14:979,42,0	1/1:18,16:35:30.10:719,30,0	0/0:27,0:27:45.15:0,45,716	0/0:24,0:24:30.08:0,30,454	0/0:26,0:26:66.22:0,66,1042	1/1:1,8:10:18.06:432,18,0	1/1:12,19:32:63.22:1428,63,0	1/1:8,16:24:42.14:1006,42,0	1/1:5,11:17:27.09:632,27,0
chr10	56611431	.	CT	C	1106.72	PASS	AB=0.783;AC=17;AF=0.304;AN=56;BaseQRankSum=3.507;DP=507;FS=17.724;HRun=14;HaplotypeScore=68.4195;InbreedingCoeff=0.3944;MQ=62.08;MQ0=13;MQRankSum=2.166;QD=5.10;ReadPosRankSum=6.007;VQSLOD=0.5117;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,1:41:45.57:0,46,504	0/0:4,0:4:8.50:0,8,51	0/0:17,0:12:5.91:0,6,44	0/0:19,0:9:6:0,6,51	0/0:15,2:17:10.28:0,10,220	1/1:13,6:20:10.77:67,11,0	1/1:9,12:21:32.66:202,33,0	0/0:36,0:33:45.87:0,46,259	0/0:8,0:8:5.96:0,6,47	0/0:17,0:17:18.47:0,18,161	0/0:17,0:16:21.01:0,21,190	0/1:7,5:13:45.32:64,0,45	0/0:18,0:18:29.91:0,30,246	0/1:13,1:16:2.36:2,0,87	0/0:23,0:23:47.91:0,48,413	0/1:6,16:22:14.60:152,0,15	0/1:13,18:30:3.83:220,0,4	1/1:2,12:14:29.71:205,30,0	0/0:8,0:9:14.84:0,15,123	0/0:15,0:19:30.53:0,31,224	0/0:16,3:19:8.18:0,8,197	1/1:4,9:13:1.84:157,2,0	0/0:7,0:7:0:0,0,0	1/1:2,15:18:28.79:191,29,0	0/0:14,0:14:24.68:0,25,195	0/1:15,1:16:5.52:6,0,85	0/1:16,3:20:5.36:5,0,213	0/1:8,2:9:2.58:3,0,117
chr10	56611867	.	TTGTG	T	3501.50	PASS	AB=0.842;AC=22;AF=0.440;AN=50;BaseQRankSum=3.580;DP=563;FS=7.911;HRun=0;HaplotypeScore=111.9777;InbreedingCoeff=0.6890;MQ=57.41;MQ0=9;MQRankSum=-0.693;QD=15.09;ReadPosRankSum=1.408;VQSLOD=2.9417;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:32:38.85:0,39,785	./.	./.	./.	0/0:18,0:18:33.10:0,33,737	0/0:24,0:24:9.03:0,9,159	0/0:23,0:23:9.50:0,10,182	0/0:24,0:23:3.54:0,4,175	1/1:9,9:18:24.08:379,24,0	1/1:10,8:19:27.56:406,28,0	1/1:8,6:14:15.04:217,15,0	0/0:21,0:23:9.50:0,9,156	0/0:23,0:23:44.89:0,45,978	0/1:20,2:23:11.50:11,0,655	1/1:9,18:28:42.14:643,42,0	0/0:20,0:26:12.63:0,13,197	0/0:14,0:15:9.03:0,9,162	0/0:16,0:15:21.05:0,21,385	1/1:17,1:22:14.34:191,14,0	1/1:11,11:21:15.05:237,15,0	0/1:15,4:20:37.65:283,0,38	0/0:16,0:18:3.01:0,3,51	0/0:18,0:17:9.01:0,9,144	0/0:16,0:20:8.83:0,9,124	1/1:4,6:11:8.57:272,9,0	1/1:12,6:20:19.23:266,19,0	1/1:16,14:31:36.12:548,36,0	1/1:2,1:3:3.01:47,3,0
chr10	56612292	.	TAA	T	1837.85	PASS	AB=0.764;AC=21;AF=0.375;AN=56;BaseQRankSum=3.027;DP=417;FS=20.272;HRun=16;HaplotypeScore=57.2384;InbreedingCoeff=0.6574;MQ=62.63;MQ0=8;MQRankSum=1.759;QD=9.28;ReadPosRankSum=2.750;VQSLOD=0.4803;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:24:36.19:0,36,332	0/0:1,0:2:5.38:0,5,48	0/1:17,0:8:7.13:7,0,57	0/1:12,0:8:1.80:2,0,51	0/0:16,0:22:34.70:0,35,461	0/0:15,0:15:26.98:0,27,254	0/0:6,0:7:17.37:0,17,171	0/0:18,0:28:33.84:0,34,209	0/1:4,4:8:8.26:85,0,8	1/1:7,4:12:14.47:109,14,0	1/1:6,15:22:26.28:251,26,0	0/0:13,0:13:29.27:0,29,282	0/0:15,0:15:35.95:0,36,361	0/0:9,0:9:14.88:0,15,123	1/1:0,9:10:17.87:192,18,0	0/0:16,0:15:36:0,36,368	0/0:23,0:23:53.82:0,54,584	0/0:20,0:24:47.41:0,47,513	1/1:12,8:22:14.03:219,14,0	0/1:5,9:16:6.28:201,0,6	1/1:1,5:6:11.95:100,12,0	0/0:2,0:1:3:0,3,27	0/0:9,0:10:23.41:0,23,245	0/0:6,0:7:8.38:0,8,73	1/1:3,15:18:29.75:292,30,0	1/1:10,12:22:32.63:275,33,0	1/1:5,9:16:20.43:204,20,0	0/1:3,6:13:0.66:99,0,1
chr10	56613546	.	CTG	C	142.90	PASS	AB=1.000;AC=8;AF=0.182;AN=44;BaseQRankSum=-0.040;DP=633;FS=0.000;HRun=0;HaplotypeScore=91.2353;InbreedingCoeff=0.3122;MQ=70.21;MQ0=3;MQRankSum=1.239;QD=1.04;ReadPosRankSum=1.599;VQSLOD=1.6185;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:22:22.32:22,0,39	./.	./.	./.	0/0:23,0:22:6:0,6,67	./.	1/1:36,2:37:6.04:64,6,0	0/0:22,0:21:0.47:0,0,1	0/0:26,0:26:3:0,3,26	0/0:21,0:20:12.02:0,12,132	0/0:13,0:13:6:0,6,53	1/1:22,3:25:6.01:64,6,0	0/1:24,0:24:19.68:20,0,98	0/0:21,0:21:3.01:0,3,42	0/0:36,0:35:9.02:0,9,108	0/0:21,0:21:9.01:0,9,107	0/0:21,0:30:6.46:0,6,63	0/0:10,0:10:3.01:0,3,38	0/0:26,0:26:11.51:0,12,106	0/0:17,0:17:6:0,6,54	0/0:56,0:55:29.95:0,30,339	0/0:14,0:14:3.01:0,3,44	./.	1/1:22,7:29:9.01:95,9,0	0/0:13,0:12:2.51:0,3,25	0/0:19,0:18:13.24:0,13,139	0/0:19,0:22:10.13:0,10,82	./.
chr10	56616215	.	CTTTTTT	C	4345.71	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=7.222;DP=461;FS=0.974;HRun=19;HaplotypeScore=104.8767;InbreedingCoeff=0.9377;MQ=59.58;MQ0=17;MQRankSum=-5.832;QD=24.98;ReadPosRankSum=6.252;VQSLOD=1.3883;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:60.66:0,61,1297	0/0:7,0:6:9:0,9,194	0/0:21,0:8:11.54:0,12,191	0/0:11,0:6:3.48:0,3,34	0/0:13,0:18:39.13:0,39,792	0/0:13,0:24:48.15:0,48,963	0/0:8,0:10:24.08:0,24,474	0/0:26,0:30:48.15:0,48,1010	1/1:6,6:12:23.67:355,24,0	1/1:8,7:16:28.35:402,28,0	1/1:9,6:18:29.46:400,29,0	0/0:16,0:15:26.11:0,26,445	0/0:4,0:11:15.05:0,15,372	0/0:11,0:11:24.08:0,24,558	1/1:3,9:13:29.58:433,30,0	0/0:23,0:25:33.93:0,34,910	0/0:15,0:20:35.30:0,35,685	0/0:5,0:6:15.05:0,15,327	1/1:15,6:26:48.05:670,48,0	1/1:8,3:10:8.49:146,8,0	1/1:4,5:9:11.87:176,12,0	0/0:10,0:14:33.10:0,33,644	0/0:8,0:15:23.91:0,24,505	0/0:7,0:10:12.04:0,12,240	1/1:6,10:18:38.69:598,39,0	1/1:11,11:22:32.10:505,32,0	1/1:10,5:16:29.65:448,30,0	1/1:5,3:9:16.98:211,17,0
chr10	56616239	.	CT	C	2358.16	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=7.998;DP=388;FS=1.069;HRun=8;HaplotypeScore=65.0281;InbreedingCoeff=0.8958;MQ=43.59;MQ0=25;MQRankSum=-6.191;QD=14.93;ReadPosRankSum=6.068;VQSLOD=3.4643;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:24:46.06:0,46,488	0/0:5,0:4:9.03:0,9,109	0/0:5,0:3:0:0,0,0	0/0:2,0:1:0:0,0,0	0/0:14,0:14:30.07:0,30,340	0/0:17,0:17:21.02:0,21,236	0/0:13,0:10:12.04:0,12,145	0/0:26,0:25:51.31:0,51,548	1/1:5,7:11:21:201,21,0	1/1:3,13:15:39.06:376,39,0	1/1:2,10:11:21.02:202,21,0	0/0:11,0:11:26.97:0,27,298	0/0:15,0:15:30.07:0,30,340	0/0:10,0:10:23.90:0,24,256	1/1:5,10:15:21.02:202,21,0	0/0:15,0:15:29.75:0,30,293	0/0:24,0:19:18.44:0,18,186	0/0:9,0:7:17.02:0,17,159	1/1:9,12:21:39.04:374,39,0	1/1:2,8:9:15.02:144,15,0	1/1:3,2:5:2.99:29,3,0	0/0:8,0:8:17.85:0,18,178	0/0:14,0:13:20.98:0,21,204	0/0:13,0:13:23.56:0,24,263	1/1:4,19:21:33.05:318,33,0	1/1:11,12:21:39.05:375,39,0	1/1:3,9:11:27.04:260,27,0	1/1:4,5:8:9.01:87,9,0
chr10	56618535	.	CTGTGTG	C	4164.43	PASS	AB=0.925;AC=17;AF=0.304;AN=56;BaseQRankSum=-2.984;DP=504;FS=27.658;HRun=0;HaplotypeScore=115.6511;InbreedingCoeff=0.4951;MQ=48.34;MQ0=18;MQRankSum=4.358;QD=24.21;ReadPosRankSum=1.280;VQSLOD=1.2142;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:39.06:0,39,708	0/0:12,0:12:12.04:0,12,263	0/0:15,0:9:14.96:0,15,290	0/1:19,0:10:29.91:30,0,537	0/0:23,0:22:24.08:0,24,547	0/0:12,0:18:2.84:0,3,36	0/0:14,0:11:3.01:0,3,75	0/0:33,0:28:51.59:0,52,971	0/1:21,0:20:11.73:518,0,12	1/1:7,10:16:30.06:566,30,0	1/1:9,1:11:1.03:297,1,0	0/0:18,0:17:12.51:0,13,305	0/0:15,0:15:21.01:0,21,342	0/0:14,0:13:18.53:0,19,482	0/0:14,9:22:5.93:0,6,40	0/0:16,0:14:15.05:0,15,299	0/0:8,0:7:12.46:0,12,189	0/0:11,0:10:12.04:0,12,280	0/1:7,0:9:24.08:170,0,24	1/1:14,0:15:32.72:564,33,0	0/0:10,15:23:5.97:0,6,74	0/0:27,0:25:6.02:0,6,143	0/0:17,0:15:3.01:0,3,74	0/0:9,0:15:3.47:0,3,29	1/1:9,0:15:5.03:125,5,0	1/1:19,1:21:26.55:716,27,0	1/1:25,0:27:2.50:634,3,0	1/1:14,0:15:26.98:545,27,0
chr10	56620232	.	AC	A	1243.99	PASS	AB=0.878;AC=15;AF=0.268;AN=56;BaseQRankSum=8.478;DP=657;FS=10.606;HRun=1;HaplotypeScore=146.4705;InbreedingCoeff=0.2080;MQ=53.52;MQ0=7;MQRankSum=-4.863;QD=6.62;ReadPosRankSum=-0.725;VQSLOD=-0.4842;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,144,2295	0/0:15,0:15:30.08:0,30,453	0/0:47,0:31:90.56:0,91,1369	0/0:51,0:39:99:0,111,1726	0/0:21,0:21:56.87:0,57,910	0/0:26,0:26:57.64:0,58,860	0/0:30,0:29:78.27:0,78,1229	0/0:35,0:35:95.97:0,96,1343	1/1:8,7:15:17.98:228,18,0	0/1:12,5:17:99:166,0,113	1/1:7,7:14:27.19:196,27,0	0/0:26,0:26:13.32:0,13,293	0/0:17,0:17:51.17:0,51,815	0/0:29,0:29:81.26:0,81,1261	0/1:12,2:13:31.89:123,0,32	0/1:25,0:25:0.15:0,0,132	0/0:28,0:28:17.03:0,17,349	0/0:25,0:24:63.02:0,63,943	0/1:8,0:7:9.61:10,0,158	1/1:7,5:12:19.52:154,20,0	0/1:18,3:19:23.71:69,0,24	0/0:26,0:26:34.97:0,35,569	0/0:10,0:10:18.06:0,18,288	0/0:33,0:33:8.55:0,9,389	0/1:14,3:16:11.46:166,0,11	0/1:15,10:25:99:202,0,138	0/1:9,1:10:47.38:67,0,47	0/1:9,1:10:34.39:34,0,55
chr10	56620234	.	ACGG	A	1570.87	PASS	AB=0.876;AC=15;AF=0.268;AN=56;BaseQRankSum=9.901;DP=653;FS=2.923;HRun=0;HaplotypeScore=159.8759;InbreedingCoeff=0.1240;MQ=52.96;MQ0=7;MQRankSum=-3.867;QD=8.31;ReadPosRankSum=4.329;VQSLOD=3.0629;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,150,3553	0/0:15,0:15:30.06:0,30,637	0/0:40,1:28:82.96:0,83,1802	0/0:52,0:39:99:0,112,2544	0/0:21,0:21:56.29:0,56,1330	0/0:24,0:24:48.93:0,49,985	0/0:32,0:31:78.26:0,78,1741	0/0:32,0:32:86.38:0,86,1591	1/1:8,7:15:4.30:226,4,0	0/1:12,5:17:45.76:316,0,46	1/1:7,7:14:6.96:85,7,0	0/0:25,0:25:9.87:0,10,338	0/0:18,0:18:51.15:0,51,1164	0/0:29,0:29:84.29:0,84,2001	0/1:12,2:13:45.02:145,0,45	0/0:25,0:25:7.10:0,7,138	0/1:28,0:28:1.20:1,0,398	0/0:25,0:24:59.79:0,60,1320	0/1:11,0:10:24.75:25,0,184	1/1:5,5:10:8.48:73,8,0	0/1:15,3:16:27.37:76,0,27	0/0:26,0:26:34.20:0,34,810	0/0:9,0:9:18.06:0,18,444	0/0:33,0:33:14.60:0,15,533	0/1:14,3:16:11.25:218,0,11	0/1:15,10:25:43.09:438,0,43	0/1:9,1:10:37.98:38,0,41	0/1:9,1:10:45.94:91,0,46
chr10	56620235	.	CGG	C	2356.44	PASS	AB=0.788;AC=20;AF=0.357;AN=56;BaseQRankSum=10.973;DP=635;FS=0.913;HRun=2;HaplotypeScore=144.8891;InbreedingCoeff=-0.0508;MQ=53.00;MQ0=7;MQRankSum=-5.385;QD=8.33;ReadPosRankSum=2.574;VQSLOD=0.6492;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,148,2872	0/0:15,0:15:11.12:0,11,454	0/0:47,0:28:58.29:0,58,1448	0/0:51,0:39:93.31:0,93,2041	0/0:20,0:20:54.01:0,54,1067	0/0:19,3:22:32.69:0,33,814	0/0:30,2:31:78.21:0,78,1413	0/1:22,0:29:37.31:37,0,895	1/1:7,7:14:4.10:244,4,0	0/1:9,8:17:30.86:496,0,31	1/1:7,5:12:6.02:73,6,0	0/1:25,0:25:59.27:59,0,218	0/0:18,0:18:48.15:0,48,933	0/0:29,0:29:84.29:0,84,1619	0/1:4,8:11:38.20:127,0,38	0/1:24,0:24:14.83:15,0,77	0/0:28,0:28:0.79:0,1,300	0/1:22,3:24:36.96:37,0,1019	0/1:10,1:10:63.58:64,0,159	1/1:7,1:8:9.01:104,9,0	0/1:7,9:14:11.01:65,0,11	0/0:27,0:27:13.26:0,13,614	0/0:8,1:9:18.06:0,18,366	0/1:33,0:33:36.11:36,0,395	1/1:5,11:15:1.09:202,1,0	0/1:12,11:23:10.21:689,0,10	0/1:3,6:9:29.08:76,0,29	0/1:4,5:9:22.83:199,0,23
chr10	56620241	.	A	AACACACAC	3477.75	PASS	AB=1.000;AC=25;AF=0.446;AN=56;BaseQRankSum=0.262;DP=629;FS=7.420;HRun=0;HaplotypeScore=207.0815;InbreedingCoeff=0.6151;MQ=51.54;MQ0=8;MQRankSum=-2.836;QD=11.22;ReadPosRankSum=-3.191;VQSLOD=1.4820;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,113,2732	1/1:3,10:16:21.07:655,21,0	0/0:45,0:25:58.05:0,58,1371	0/0:48,0:33:18:0,18,1213	0/0:19,0:19:33.02:0,33,822	1/1:22,0:23:11.29:87,11,0	1/1:33,0:32:19.30:108,19,0	1/1:28,0:28:75.19:1675,75,0	0/0:14,0:14:20.73:0,21,144	0/1:20,0:20:20.08:20,0,151	0/0:12,0:12:5.95:0,6,36	1/1:26,0:26:15.03:287,15,0	0/0:18,0:18:41.77:0,42,970	0/0:27,0:27:72.23:0,72,1708	0/0:12,0:11:11.78:0,12,71	1/1:26,0:26:3:28,3,0	1/1:27,0:27:3.62:74,4,0	1/1:20,0:22:7.84:248,8,0	0/1:10,0:10:14.91:31,0,15	0/0:7,0:7:5.68:0,6,40	0/0:16,0:13:5.88:0,6,36	1/1:24,0:25:5.51:65,6,0	1/1:10,0:10:4.31:22,4,0	1/1:32,0:33:8.58:172,9,0	0/0:16,0:15:18.07:0,18,110	0/0:23,0:23:4.77:0,5,198	0/0:9,0:9:7.53:0,8,29	0/1:9,0:9:3.86:4,0,32
chr10	56620247	.	CAG	C	1057.95	PASS	AB=1.000;AC=15;AF=0.278;AN=54;BaseQRankSum=-2.034;DP=671;FS=9.358;HRun=0;HaplotypeScore=156.6458;InbreedingCoeff=0.6616;MQ=50.13;MQ0=9;MQRankSum=5.772;QD=4.74;ReadPosRankSum=3.562;VQSLOD=2.4648;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:25,22:49:33.78:509,34,0	0/0:19,0:19:15.02:0,15,146	1/1:42,0:22:2.90:16,3,0	0/0:50,0:30:2.93:0,3,18	1/1:8,9:17:12.02:133,12,0	0/0:22,0:24:12.34:0,12,85	0/0:34,0:33:20.20:0,20,158	0/0:33,0:33:19.61:0,20,162	0/0:18,0:18:2.55:0,3,10	0/0:22,0:20:28.66:0,29,182	0/1:10,0:10:0:0,0,0	0/0:4,0:30:11.72:0,12,81	1/1:11,6:18:14.87:148,15,0	1/1:14,15:29:36.10:401,36,0	0/0:19,0:16:8.36:0,8,58	1/1:5,0:32:1.82:5,2,0	0/0:6,0:29:9.83:0,10,63	0/0:21,0:20:26.97:0,27,250	0/0:17,0:17:19.63:0,20,112	0/1:9,0:9:0.17:0,0,0	./.	0/0:2,0:23:4.35:0,4,42	0/0:10,0:10:5.99:0,6,51	0/0:5,0:32:8.02:0,8,46	0/1:17,0:15:0:0,0,0	0/0:27,0:27:31.62:0,32,213	0/0:13,0:13:8.33:0,8,58	0/0:7,0:7:4.87:0,5,17
chr10	56620905	.	TC	T	250.95	PASS	AB=0.792;AC=15;AF=0.313;AN=48;BaseQRankSum=1.172;DP=130;FS=1.791;HRun=10;HaplotypeScore=18.1514;InbreedingCoeff=0.1898;MQ=74.91;MQ0=0;MQRankSum=0.052;QD=4.73;ReadPosRankSum=0.859;VQSLOD=-0.5742;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:7:6.02:0,6,66	./.	0/0:3,0:3:2.92:0,3,17	0/1:7,0:3:11.12:19,0,11	./.	./.	1/1:3,1:4:9:78,9,0	0/0:6,0:6:3.01:0,3,33	0/0:1,0:1:3.01:0,3,33	0/0:6,0:6:12.03:0,12,133	0/0:3,0:3:6.02:0,6,66	1/1:6,1:7:7.03:74,7,0	0/0:3,0:5:11.85:0,12,104	0/0:6,0:6:9.01:0,9,89	0/0:6,0:6:9.02:0,9,100	0/1:5,1:6:12.78:20,0,13	1/1:1,0:1:3:26,3,0	0/1:4,3:7:40.02:40,0,54	0/0:4,0:5:11.87:0,12,113	0/0:2,0:2:2.99:0,3,24	0/0:12,0:12:26.99:0,27,261	1/1:3,2:5:2.98:26,3,0	1/1:3,1:4:0.72:2,1,0	0/1:2,3:5:21.77:43,0,22	0/0:5,0:5:6.02:0,6,66	0/1:5,2:7:59.98:60,0,81	0/0:3,0:3:0.18:0,0,0	./.
chr10	56621685	.	A	ATCTG	1251.45	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-5.758;DP=640;FS=6.313;HRun=0;HaplotypeScore=106.6038;InbreedingCoeff=0.7788;MQ=72.46;MQ0=0;MQRankSum=-3.505;QD=30.52;ReadPosRankSum=-4.226;VQSLOD=2.3612;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:57.15:0,57,870	1/1:3,4:8:3.01:74,3,0	0/0:22,0:20:24.05:0,24,314	0/0:21,0:18:13.13:0,13,192	0/0:8,0:8:15.03:0,15,251	0/0:17,0:17:36.12:0,36,602	0/0:40,0:40:90.25:0,90,1415	1/1:9,22:33:75.03:1286,75,0	0/0:19,0:19:45.14:0,45,723	0/0:24,0:24:51.17:0,51,829	0/0:5,0:5:9.02:0,9,125	0/0:45,0:45:96.72:0,97,1436	0/0:18,0:18:45.14:0,45,726	0/0:34,0:34:74.85:0,75,1098	0/0:15,0:15:36.11:0,36,567	0/0:24,0:24:60.15:0,60,903	0/0:34,0:34:87.27:0,87,1421	0/0:34,0:34:72.16:0,72,1069	0/0:16,0:16:33.08:0,33,458	0/0:5,0:5:6.02:0,6,100	0/0:57,0:57:99:0,138,2096	0/0:7,0:7:9.01:0,9,124	0/0:9,0:9:18.04:0,18,249	0/0:49,0:49:99:0,117,1851	0/0:15,0:15:45.13:0,45,725	0/0:22,0:22:51.12:0,51,730	0/0:24,0:24:48.16:0,48,795	0/0:10,0:10:24.06:0,24,371
chr10	56626547	.	T	TGG	3217.75	PASS	AB=0.938;AC=38;AF=0.864;AN=44;BaseQRankSum=-2.377;DP=127;FS=9.736;HRun=2;HaplotypeScore=105.5306;InbreedingCoeff=0.1369;MQ=69.33;MQ0=0;MQRankSum=-0.116;QD=26.81;ReadPosRankSum=0.007;VQSLOD=1.8687;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,2:4:6.02:97,6,0	./.	0/1:6,1:7:8.12:128,0,8	0/0:3,0:3:2.37:0,2,8	0/0:1,0:1:0:0,0,0	1/1:2,0:2:3.01:55,3,0	1/1:13,0:13:23.12:311,23,0	1/1:6,0:8:21.03:284,21,0	1/1:6,1:7:8.74:176,9,0	1/1:1,0:1:3.01:56,3,0	./.	1/1:6,0:6:14.99:181,15,0	1/1:9,0:9:27.09:412,27,0	1/1:1,0:1:3.01:36,3,0	1/1:11,0:11:29.79:374,30,0	1/1:4,0:4:11.07:130,11,0	1/1:6,0:6:5.46:106,5,0	0/1:9,0:9:5.89:146,0,6	1/1:2,0:2:6.02:71,6,0	./.	1/1:9,0:9:9.03:124,9,0	./.	./.	1/1:14,0:14:30.06:387,30,0	1/1:1,0:1:3.01:37,3,0	1/1:4,0:4:12.03:160,12,0	1/1:2,0:2:4.26:39,4,0	./.
chr10	56626996	.	CA	C	344.61	PASS	AB=0.833;AC=26;AF=0.867;AN=30;BaseQRankSum=-2.113;DP=52;FS=5.969;HRun=4;HaplotypeScore=13.3066;InbreedingCoeff=0.1330;MQ=88.50;MQ0=0;MQRankSum=-2.113;QD=7.83;ReadPosRankSum=-1.445;VQSLOD=-0.6148;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,0:2:2.99:23,3,0	1/1:2,0:2:2.98:21,3,0	0/1:1,1:1:14.17:18,0,14	0/0:3,0:3:5.84:0,6,33	./.	1/1:4,0:4:2.97:20,3,0	1/1:2,0:2:5.93:40,6,0	1/1:0,2:2:2.90:16,3,0	./.	./.	./.	0/1:1,0:1:0:0,0,0	1/1:2,0:2:5.98:56,6,0	1/1:2,0:2:3:25,3,0	./.	./.	1/1:5,0:5:8.97:79,9,0	./.	./.	./.	1/1:8,1:9:6.24:34,6,0	1/1:1,1:2:5.77:33,6,0	./.	1/1:4,0:4:3.01:35,3,0	1/1:5,0:5:4.90:39,5,0	./.	./.	./.
chr10	56627201	.	GT	G	8721.46	PASS	AB=0.742;AC=44;AF=0.786;AN=56;BaseQRankSum=2.467;DP=559;FS=7.882;HRun=10;HaplotypeScore=67.6470;InbreedingCoeff=0.7745;MQ=76.70;MQ0=0;MQRankSum=-1.416;QD=19.60;ReadPosRankSum=3.177;VQSLOD=5.8119;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:35:92.83:0,93,942	0/1:2,8:10:3.18:200,0,3	0/0:21,0:20:9.50:0,10,182	0/1:12,1:11:11.62:12,0,63	0/0:17,1:18:24.94:0,25,452	1/1:2,31:33:86.98:755,87,0	1/1:2,14:16:32.99:286,33,0	1/1:6,20:26:56.93:485,57,0	1/1:5,22:27:56.96:490,57,0	1/1:4,9:13:35.66:294,36,0	1/1:0,8:8:21:182,21,0	1/1:3,19:22:20.81:409,21,0	0/0:18,1:19:6.06:0,6,445	0/0:21,0:21:60.07:0,60,628	1/1:6,9:15:8.58:232,9,0	1/1:1,22:23:65.99:572,66,0	1/1:4,39:43:98.85:859,99,0	1/1:1,19:20:44.98:390,45,0	1/1:8,10:18:44.55:366,45,0	1/1:7,9:16:26.98:234,27,0	1/1:3,13:16:38.99:338,39,0	1/1:1,9:10:17.98:156,18,0	1/1:3,15:18:41.99:364,42,0	1/1:2,12:14:29.99:260,30,0	1/1:1,12:13:32.98:286,33,0	1/1:6,25:32:73.90:617,74,0	1/1:3,27:30:80.94:697,81,0	1/1:0,9:9:26.99:234,27,0
chr10	56627262	.	TA	T	4333.17	PASS	AB=0.938;AC=28;AF=0.500;AN=56;BaseQRankSum=-0.936;DP=564;FS=5.660;HRun=11;HaplotypeScore=79.3354;InbreedingCoeff=0.8697;MQ=69.16;MQ0=0;MQRankSum=-2.501;QD=15.99;ReadPosRankSum=2.158;VQSLOD=5.7113;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:44,4:49:30.36:0,30,893	1/1:3,7:12:24.80:183,25,0	0/1:8,0:8:10.28:10,0,43	0/0:10,0:9:5.81:0,6,56	0/0:23,0:23:42.07:0,42,437	0/0:19,0:19:30.08:0,30,320	0/0:14,0:14:27.07:0,27,288	1/1:9,24:35:73.60:571,74,0	1/1:9,18:27:59.86:489,60,0	1/1:4,9:13:29.95:244,30,0	1/1:3,8:11:20.95:172,21,0	0/0:23,0:23:51.11:0,51,528	0/0:19,1:20:8.35:0,8,265	0/1:12,2:14:0.58:1,0,197	1/1:5,20:25:27.93:436,28,0	0/0:21,0:21:51.13:0,51,544	0/0:35,1:36:77.95:0,78,778	0/0:20,0:20:48.10:0,48,503	1/1:3,12:17:39.99:300,40,0	1/1:6,6:13:22.82:168,23,0	1/1:8,8:16:32.89:265,33,0	0/0:22,1:23:32.47:0,32,530	0/0:15,0:15:18.05:0,18,191	0/0:20,0:20:57.11:0,57,592	1/1:2,17:19:50.93:419,51,0	1/1:9,14:23:33.86:392,34,0	1/1:8,16:24:56.91:464,57,0	1/1:5,8:13:26.93:219,27,0
chr10	56628391	.	G	GTA	6031.16	PASS	AC=36;AF=0.750;AN=48;BaseQRankSum=10.045;DP=383;FS=1.134;HRun=0;HaplotypeScore=102.8603;InbreedingCoeff=0.8342;MQ=68.07;MQ0=1;MQRankSum=-9.249;QD=23.38;ReadPosRankSum=-1.485;VQSLOD=5.1186;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:57.19:0,57,739	1/1:4,6:10:18.03:260,18,0	0/0:13,0:9:9:0,9,86	0/0:22,0:11:2.50:0,2,14	0/0:28,0:28:69.21:0,69,881	1/1:2,14:16:20.28:138,20,0	./.	1/1:12,23:35:78.24:1134,78,0	1/1:9,6:15:21.07:337,21,0	1/1:5,4:9:26.12:383,26,0	1/1:5,5:10:10.57:126,11,0	1/1:7,4:11:14.08:183,14,0	0/0:17,0:17:42.14:0,42,545	0/0:13,0:13:33.11:0,33,427	1/1:3,8:11:6.02:101,6,0	1/1:6,4:10:15.51:216,16,0	1/1:5,8:13:1.24:3,1,0	1/1:5,9:14:20.10:285,20,0	1/1:8,7:14:27.09:438,27,0	1/1:11,7:18:19.31:294,19,0	./.	1/1:4,0:4:3:25,3,0	./.	./.	1/1:1,22:23:42.14:671,42,0	1/1:3,14:17:45.10:672,45,0	1/1:4,15:18:33.11:526,33,0	1/1:1,7:8:15.05:241,15,0
chr10	56628787	.	A	AG	10437.07	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=11.080;DP=752;FS=10.926;HRun=3;HaplotypeScore=114.7587;InbreedingCoeff=0.9999;MQ=83.52;MQ0=0;MQRankSum=-1.322;QD=38.94;ReadPosRankSum=-1.012;VQSLOD=2.7740;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:56:99:0,159,1907	1/1:1,11:12:34.36:465,34,0	0/0:21,0:21:57.01:0,57,648	0/0:23,0:23:47.51:0,48,604	0/0:30,0:30:78.24:0,78,936	1/1:1,27:28:72.24:1008,72,0	1/1:2,24:26:72.24:1008,72,0	1/1:2,33:35:99:1465,105,0	0/0:28,0:28:81.19:0,81,945	0/0:34,0:34:99:0,102,1215	0/0:22,0:22:60.18:0,60,720	1/1:2,19:21:60.18:822,60,0	0/0:33,0:33:99:0,99,1188	0/0:26,0:26:75.22:0,75,893	0/0:39,0:39:99:0,111,1297	1/1:2,24:26:66.22:923,66,0	1/1:2,19:21:54.18:756,54,0	1/1:0,21:21:60.20:840,60,0	0/0:24,0:24:66.15:0,66,756	0/0:21,0:21:57.17:0,57,683	0/0:29,0:29:87.27:0,87,1044	1/1:0,28:28:84.28:1175,84,0	1/1:0,21:21:60.20:840,60,0	1/1:2,27:29:81.27:1134,81,0	0/0:17,0:17:51.16:0,51,612	0/0:31,0:31:84.26:0,84,1008	0/0:40,0:39:99:0,114,1352	0/0:10,0:10:30.09:0,30,360
chr10	56630017	.	T	TTG	13724.23	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-17.137;DP=1184;FS=0.846;HRun=0;HaplotypeScore=148.4259;InbreedingCoeff=0.9932;MQ=64.46;MQ0=14;MQRankSum=2.935;QD=29.90;ReadPosRankSum=2.776;VQSLOD=6.0906;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:43:99:0,114,1398	0/0:8,0:8:12.04:0,12,144	0/0:67,0:24:32.23:0,32,320	0/0:73,0:24:21.04:0,21,296	0/0:25,0:26:69:0,69,806	0/0:19,0:19:48.13:0,48,580	0/0:46,0:45:99:0,114,1371	0/0:40,0:40:63.18:0,63,760	1/1:8,39:49:61.74:1534,62,0	1/1:12,39:53:99:1899,120,0	1/1:5,9:15:20.76:342,21,0	0/0:53,0:54:99:0,129,1563	0/0:44,0:44:99:0,114,1397	0/0:55,0:55:99:0,144,1760	1/1:8,37:48:84.29:1372,84,0	0/0:56,0:56:99:0,147,1781	0/0:43,0:43:99:0,105,1262	0/0:40,0:41:98.81:0,99,1178	1/1:10,21:28:18.12:718,18,0	1/1:2,22:24:48.16:769,48,0	1/1:17,109:127:99:3641,223,0	0/0:35,0:35:81.23:0,81,972	0/0:26,0:26:62.93:0,63,755	0/0:46,0:48:99:0,108,1274	1/1:10,28:38:48.19:1015,48,0	1/1:8,25:34:75.14:1120,75,0	1/1:6,14:22:48.16:774,48,0	1/1:3,12:15:33.11:541,33,0
chr10	56630691	.	A	ACTCT	16812.46	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-12.517;DP=733;FS=3.064;HRun=0;HaplotypeScore=153.1928;InbreedingCoeff=0.9998;MQ=65.85;MQ0=0;MQRankSum=-3.478;QD=55.12;ReadPosRankSum=3.159;VQSLOD=6.3142;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:60.04:0,60,942	0/0:15,0:15:39.10:0,39,687	0/0:28,0:25:61.26:0,61,879	0/0:27,0:20:35.20:0,35,505	0/0:29,0:29:84.23:0,84,1474	0/0:26,0:26:72.17:0,72,1258	0/0:13,0:13:30.06:0,30,518	0/0:54,0:54:99:0,160,2754	1/1:1,17:20:39.13:956,39,0	1/1:2,31:34:93.23:2117,93,0	1/1:2,23:25:60.20:1384,60,0	0/0:32,0:32:78.23:0,78,1381	0/0:24,0:24:66.14:0,66,1100	0/0:27,0:27:75.23:0,75,1324	1/1:3,24:28:75.25:1405,75,0	0/0:37,0:37:99:0,102,1751	0/0:22,0:21:63.15:0,63,1078	0/0:13,0:13:36.08:0,36,636	1/1:5,21:26:72.21:1621,72,0	1/1:4,27:31:66.22:1425,66,0	1/1:6,19:26:41.62:1144,42,0	0/0:23,0:23:66.11:0,66,1060	0/0:20,0:20:54.04:0,54,855	0/0:15,0:15:45.09:0,45,745	1/1:3,24:29:57.19:1436,57,0	1/1:4,33:39:99:2811,114,0	1/1:0,25:25:72.24:1716,72,0	1/1:6,15:20:30.10:799,30,0
chr10	56630925	.	ATGTGTGTGTGTGTGTGTGTG	A	2900.54	PASS	AB=0.822;AC=17;AF=0.315;AN=54;BaseQRankSum=6.488;DP=957;FS=58.709;HRun=0;HaplotypeScore=426.1589;InbreedingCoeff=0.5470;MQ=49.90;MQ0=26;MQRankSum=-1.712;QD=7.95;ReadPosRankSum=-2.874;VQSLOD=-0.6784;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:54:52.70:0,53,2677	0/0:12,0:12:18.06:0,18,821	0/0:36,0:12:6.02:0,6,75	0/0:44,0:20:3.48:0,3,38	0/0:23,0:25:21.07:0,21,987	0/0:17,0:22:12.03:0,12,330	0/0:41,0:40:24.08:0,24,696	0/0:40,0:37:17.63:0,18,327	1/1:28,16:44:6.97:133,7,0	0/1:25,14:37:81.70:489,0,82	1/1:10,8:17:2.75:63,3,0	0/0:36,0:37:39.13:0,39,934	0/0:26,0:27:46.68:0,47,1814	0/0:41,0:39:48.16:0,48,2338	1/1:35,17:52:2.02:146,2,0	0/0:32,0:47:18.53:0,19,338	0/0:23,0:23:30.40:0,30,781	0/0:19,0:17:17.89:0,18,453	1/1:16,5:18:14.40:224,14,0	./.	0/1:78,0:76:37.26:37,0,56	0/0:22,0:29:15.52:0,16,591	0/0:26,0:26:27.56:0,28,965	0/0:39,0:45:25.29:0,25,843	1/1:19,3:21:5.32:181,5,0	0/1:22,12:35:22.83:1146,0,23	1/1:15,14:29:6.16:196,6,0	1/1:18,9:27:9.03:457,9,0
chr10	56631104	.	C	CTGG	11777.16	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=12.868;DP=694;FS=0.675;HRun=0;HaplotypeScore=135.2527;InbreedingCoeff=0.9998;MQ=68.88;MQ0=0;MQRankSum=-5.379;QD=62.64;ReadPosRankSum=3.899;VQSLOD=6.3025;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,138,2528	0/0:14,0:14:42.10:0,42,689	0/0:28,0:24:60.59:0,61,1041	0/0:31,0:24:50.06:0,50,1001	0/0:27,0:27:78.27:0,78,1437	1/1:0,20:20:57.15:1315,57,0	1/1:0,20:20:54.19:1310,54,0	0/0:27,0:27:81.27:0,81,1472	0/0:18,0:18:54.19:0,54,1007	0/0:27,0:27:81.28:0,81,1508	0/0:14,0:14:36:0,36,601	1/1:0,22:23:69.24:1670,69,0	0/0:26,0:26:72.25:0,72,1311	0/0:26,0:26:69.22:0,69,1255	0/0:33,0:32:90.77:0,91,1647	1/1:1,21:25:66.23:1607,66,0	1/1:2,29:32:84.29:2051,84,0	1/1:0,18:20:51.18:1248,51,0	0/0:20,0:20:54.19:0,54,1005	0/0:31,0:31:90.31:0,90,1667	0/0:40,0:40:99:0,99,1813	1/1:1,18:19:45.15:1092,45,0	1/1:0,15:16:30.10:713,30,0	1/1:0,13:13:32.90:772,33,0	0/0:23,0:23:68.97:0,69,1242	0/0:31,0:31:87.25:0,87,1547	0/0:26,0:26:72.25:0,72,1298	0/0:14,0:14:39.13:0,39,729
chr10	56631120	.	C	CCCTT	5689.63	PASS	AB=0.875;AC=39;AF=0.750;AN=52;BaseQRankSum=5.037;DP=765;FS=36.339;HRun=0;HaplotypeScore=216.1047;InbreedingCoeff=0.7823;MQ=60.91;MQ0=9;MQRankSum=-8.081;QD=11.07;ReadPosRankSum=-5.859;VQSLOD=1.9914;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:47:81.28:0,81,1258	1/1:6,7:13:11.87:282,12,0	./.	./.	0/0:32,0:32:56.45:0,56,821	1/1:17,4:21:21.06:412,21,0	0/1:18,3:21:37.56:100,0,38	1/1:25,0:25:9.48:94,9,0	1/1:22,0:21:17.50:111,17,0	1/1:36,0:36:32.13:320,32,0	1/1:22,0:22:22.14:172,22,0	1/1:18,9:26:39.12:804,39,0	0/0:23,0:23:48.14:0,48,697	0/0:28,0:29:45.12:0,45,660	1/1:31,0:30:8.62:47,9,0	1/1:20,10:30:1.56:970,2,0	0/0:31,0:30:45.03:0,45,594	0/0:24,0:24:44.95:0,45,561	1/1:18,0:17:6.02:70,6,0	1/1:33,0:33:27.42:326,27,0	1/1:35,0:34:4.90:54,5,0	1/1:21,7:25:28.58:385,29,0	1/1:17,5:21:17.92:260,18,0	1/1:13,4:17:23.93:328,24,0	1/1:30,0:30:16.67:216,17,0	1/1:34,0:34:24.34:250,24,0	1/1:33,0:33:26.88:338,27,0	1/1:16,0:16:14.93:150,15,0
chr10	56631170	.	CCCTTTCTTTCTT	C	11098.47	PASS	AB=0.667;AC=21;AF=0.375;AN=56;BaseQRankSum=12.622;DP=639;FS=2.933;HRun=0;HaplotypeScore=247.7615;InbreedingCoeff=0.8879;MQ=49.43;MQ0=5;MQRankSum=-10.374;QD=48.68;ReadPosRankSum=2.851;VQSLOD=4.2819;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,102,4873	0/0:9,0:9:21.03:0,21,864	0/0:25,0:12:6.02:0,6,245	0/0:16,0:11:18.06:0,18,381	0/0:31,0:31:60.19:0,60,2926	0/0:18,0:18:42.14:0,42,2403	0/0:20,0:20:51.18:0,51,2619	0/0:20,0:20:36.12:0,36,1453	1/1:7,5:11:9.03:316,9,0	1/1:10,26:36:63.17:1676,63,0	1/1:7,12:19:30.03:905,30,0	0/0:20,0:19:45.15:0,45,2035	0/0:23,0:23:36.12:0,36,1760	0/0:28,0:28:57.19:0,57,2782	1/1:5,18:23:36.12:1206,36,0	0/0:26,0:26:57.19:0,57,2515	0/0:24,0:24:45.15:0,45,2372	0/0:25,0:25:60.17:0,60,2740	1/1:6,10:16:30.09:783,30,0	1/1:3,22:25:57.14:1859,57,0	0/1:9,9:18:5.37:5,0,78	0/0:32,0:30:78.27:0,78,4337	0/0:21,0:20:60.19:0,60,2719	0/0:23,0:23:57.06:0,57,3090	1/1:8,11:19:19.09:813,19,0	1/1:3,20:23:45.62:1722,46,0	1/1:6,23:29:53.80:1747,54,0	1/1:4,4:8:3.01:65,3,0
chr10	56631176	.	CTTT	C	1685.13	PASS	AB=0.984;AC=11;AF=0.196;AN=56;BaseQRankSum=14.288;DP=642;FS=9.183;HRun=3;HaplotypeScore=167.0358;InbreedingCoeff=-0.0502;MQ=49.95;MQ0=7;MQRankSum=-13.183;QD=8.38;ReadPosRankSum=5.052;VQSLOD=-0.3703;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,138,3027	0/0:9,0:9:24.08:0,24,591	0/0:22,0:7:21:0,21,386	0/0:17,0:11:33.09:0,33,714	0/0:33,0:33:96.29:0,96,2156	0/0:17,0:17:48.16:0,48,1149	0/0:23,0:24:65.39:0,65,1589	0/0:22,0:21:60.68:0,61,1471	0/1:11,0:10:28.04:39,0,28	0/1:33,0:33:99:199,0,316	0/1:18,1:19:50.44:141,0,50	0/0:21,0:20:60.15:0,60,1315	0/0:23,0:23:69.14:0,69,1476	0/0:30,0:30:84.23:0,84,1891	0/1:21,1:22:99:230,0,111	0/0:25,0:25:72.17:0,72,1608	0/0:23,0:23:66.19:0,66,1438	0/0:26,0:26:75:0,75,1633	0/1:16,0:16:60.03:60,0,436	0/1:25,0:25:99:288,0,120	0/0:18,0:18:14.86:0,15,120	0/0:32,0:31:93.32:0,93,2280	0/0:22,0:21:63.22:0,63,1550	0/0:27,0:28:35.62:0,36,1580	0/1:17,1:18:99:190,0,157	0/1:22,0:22:93.44:280,0,93	0/1:28,0:28:14.60:345,0,15	1/1:6,1:7:6.07:63,6,0
chr10	56631969	.	GA	G	2434.31	PASS	AB=0.887;AC=21;AF=0.375;AN=56;BaseQRankSum=-0.473;DP=647;FS=1.193;HRun=13;HaplotypeScore=80.3882;InbreedingCoeff=0.6071;MQ=58.81;MQ0=9;MQRankSum=1.185;QD=8.01;ReadPosRankSum=5.185;VQSLOD=2.8570;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,7:40:23.18:0,23,637	0/0:5,0:8:18.73:0,19,94	0/1:19,0:10:2.36:2,0,93	0/1:25,0:6:6.78:7,0,99	0/0:26,2:28:23.72:0,24,494	1/1:5,13:19:4.79:194,5,0	1/1:10,16:25:18.09:258,18,0	0/0:7,0:22:34.22:0,34,165	0/0:14,0:14:21.03:0,21,200	0/0:19,0:19:44.07:0,44,399	0/0:20,0:20:36.22:0,36,312	1/1:8,23:31:26.56:349,27,0	0/0:11,0:11:30.05:0,30,292	0/0:18,1:21:4.55:0,5,221	0/0:21,1:25:38.05:0,38,468	1/1:10,21:31:20.37:305,20,0	1/1:12,26:40:46.34:478,46,0	1/1:5,12:17:14.18:274,14,0	0/1:17,1:18:14.43:14,0,349	0/0:26,0:26:45.51:0,46,427	0/1:9,3:12:13.77:14,0,199	0/1:13,11:24:20.10:194,0,20	1/1:3,13:17:39.86:273,40,0	1/1:15,9:24:38.31:273,38,0	0/0:24,1:25:9.87:0,10,315	0/0:31,2:33:14.50:0,14,446	0/0:17,0:21:35.64:0,36,327	0/0:28,0:28:50.88:0,51,467
chr10	56632325	.	GAAA	G	4137.80	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=13.800;DP=584;FS=0.000;HRun=7;HaplotypeScore=87.9673;InbreedingCoeff=0.9343;MQ=56.48;MQ0=16;MQRankSum=-3.609;QD=19.43;ReadPosRankSum=-0.120;VQSLOD=0.2489;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,132,2630	0/0:11,0:11:30.10:0,30,622	0/0:19,0:4:8.69:0,9,73	0/0:23,0:6:3.01:0,3,64	0/0:23,0:23:62.98:0,63,1151	0/0:19,0:19:54.16:0,54,1068	0/0:22,0:22:61.75:0,62,1189	0/0:24,0:22:56.93:0,57,963	1/1:10,0:10:21.04:227,21,0	1/1:22,1:22:63.08:746,63,0	1/1:17,0:16:34.93:298,35,0	0/0:19,0:19:56.94:0,57,1050	0/0:18,0:17:44.52:0,45,915	0/0:13,0:13:39.13:0,39,772	1/1:26,1:27:31.85:399,32,0	0/0:18,0:18:11.24:0,11,892	0/0:38,0:37:99:0,111,2280	0/0:17,0:17:45.15:0,45,980	1/1:18,1:18:40.53:401,41,0	1/1:30,1:31:56.98:635,57,0	1/1:3,1:4:2.80:35,3,0	0/0:12,0:12:36.09:0,36,629	0/0:21,0:20:54.15:0,54,999	0/0:25,0:25:60.20:0,60,1266	1/1:19,1:20:34.23:391,34,0	1/1:17,0:17:34.95:346,35,0	1/1:23,0:23:35.44:367,35,0	1/1:19,3:22:27.05:293,27,0
chr10	56632331	.	AAG	A	4926.95	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=15.259;DP=589;FS=4.435;HRun=0;HaplotypeScore=78.1621;InbreedingCoeff=0.9035;MQ=57.39;MQ0=17;MQRankSum=-3.383;QD=20.44;ReadPosRankSum=-0.127;VQSLOD=4.7421;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,135,1768	0/0:10,0:10:29.66:0,30,388	0/1:24,0:5:1.24:1,0,38	0/0:29,0:8:4.63:0,5,33	0/0:25,0:25:59.96:0,60,762	0/0:17,0:17:47.75:0,48,678	0/0:21,0:21:59.35:0,59,764	0/0:21,0:20:53.67:0,54,567	1/1:1,12:13:21.07:289,21,0	1/1:3,19:21:57.16:709,57,0	1/1:4,12:15:35.97:407,36,0	0/0:18,0:18:49.30:0,49,636	0/0:17,0:16:46.69:0,47,633	0/0:14,0:14:41.12:0,41,513	1/1:4,24:28:35.56:457,36,0	0/0:18,1:19:13.62:0,14,604	0/0:42,0:41:99:0,112,1552	0/0:16,0:16:48.12:0,48,675	1/1:9,11:19:42.95:431,43,0	1/1:4,27:31:68.14:800,68,0	1/1:2,2:4:3.01:44,3,0	0/0:10,0:10:10.24:0,10,316	0/0:18,0:17:51.05:0,51,673	0/0:24,0:24:48.07:0,48,791	1/1:2,18:20:37.63:498,38,0	1/1:2,15:17:35.61:459,36,0	1/1:3,20:23:38.51:504,39,0	1/1:3,20:23:26.72:329,27,0
chr10	56632332	.	AG	A	3098.90	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=15.819;DP=583;FS=6.493;HRun=1;HaplotypeScore=74.0608;InbreedingCoeff=0.8818;MQ=58.43;MQ0=16;MQRankSum=-4.705;QD=13.36;ReadPosRankSum=-0.321;VQSLOD=2.2394;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,135,1383	0/0:10,0:10:27.05:0,27,291	0/1:25,0:6:7:7,0,22	0/0:29,1:8:3.24:0,3,19	0/0:21,2:23:60:0,60,608	0/0:19,0:18:48.01:0,48,529	0/0:21,0:21:57.10:0,57,599	0/0:21,0:20:45.51:0,46,425	1/1:13,0:13:20.89:181,21,0	1/1:20,0:19:55.10:456,55,0	1/1:14,0:13:35.61:273,36,0	0/0:17,0:17:41.03:0,41,453	0/0:17,0:16:46.55:0,47,473	0/0:15,0:15:30.14:0,30,414	1/1:26,2:28:29.76:293,30,0	0/0:19,0:19:28.74:0,29,488	0/0:43,0:42:99:0,101,1202	0/0:16,0:16:47.94:0,48,505	1/1:14,2:16:42.20:344,42,0	1/1:29,1:30:68.05:571,68,0	1/1:4,0:4:3:28,3,0	0/0:10,0:10:9.48:0,9,239	0/0:18,0:17:50.94:0,51,516	0/0:25,0:25:47.87:0,48,605	1/1:19,1:20:35.16:323,35,0	1/1:15,1:16:34.92:291,35,0	1/1:22,1:23:38.57:335,39,0	1/1:23,0:23:26.11:215,26,0
chr10	56632489	.	G	GA	260.57	PASS	AB=0.714;AC=1;AF=0.018;AN=56;BaseQRankSum=-3.505;DP=583;FS=0.000;HRun=4;HaplotypeScore=54.3709;InbreedingCoeff=-0.0186;MQ=58.54;MQ0=8;MQRankSum=1.133;QD=10.42;ReadPosRankSum=0.287;VQSLOD=0.5856;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,114,1293	0/0:6,0:6:18.05:0,18,204	0/0:23,0:11:24.04:0,24,259	0/0:20,0:11:30.09:0,30,340	0/0:27,0:27:72.19:0,72,807	0/0:20,0:20:57.16:0,57,645	0/0:22,0:22:63.09:0,63,698	0/0:41,0:40:99:0,111,1245	0/0:21,0:21:54.15:0,54,612	0/0:16,0:16:48.14:0,48,544	0/0:20,0:20:48.12:0,48,535	0/0:23,0:23:66.17:0,66,738	0/0:11,0:11:33.09:0,33,374	0/0:20,0:20:57.16:0,57,646	0/0:22,0:22:57.16:0,57,646	0/0:19,0:19:51.14:0,51,578	0/0:26,0:26:66.18:0,66,749	0/0:26,0:26:61.72:0,62,684	0/0:30,0:28:78.16:0,78,871	0/0:15,0:15:39.11:0,39,440	0/0:14,0:14:39.11:0,39,442	0/0:16,0:16:45.13:0,45,511	0/0:15,0:15:45.13:0,45,510	0/0:17,0:17:48.10:0,48,522	0/0:15,0:15:45.13:0,45,510	0/1:15,10:25:99:335,0,435	0/0:20,0:20:48.12:0,48,534	0/0:8,0:8:24.07:0,24,272
chr10	56633214	.	ATT	A	2041.40	PASS	AB=0.609;AC=17;AF=0.304;AN=56;BaseQRankSum=-0.616;DP=574;FS=0.899;HRun=16;HaplotypeScore=77.7711;InbreedingCoeff=0.8681;MQ=67.48;MQ0=2;MQRankSum=1.905;QD=11.16;ReadPosRankSum=9.140;VQSLOD=2.1154;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,3:35:16.10:0,16,862	0/0:3,0:7:15.02:0,15,150	0/0:27,0:16:18.38:0,18,160	0/0:22,0:9:2.43:0,2,44	0/0:27,0:30:65.97:0,66,705	1/1:3,11:15:26.67:212,27,0	1/1:7,16:24:33.85:285,34,0	0/0:16,0:25:51.96:0,52,561	0/0:7,0:21:21.01:0,21,215	0/0:10,0:27:75.11:0,75,761	0/0:12,0:23:44.93:0,45,422	0/1:5,7:14:38.49:58,0,38	0/0:10,0:12:28.24:0,28,295	0/0:8,0:9:20.46:0,20,204	0/0:10,0:22:21.03:0,21,203	1/1:6,10:17:20.73:217,21,0	1/1:6,22:32:44.47:446,44,0	1/1:9,13:25:34.87:302,35,0	0/0:12,0:23:57.14:0,57,640	0/0:10,0:24:54.10:0,54,552	0/0:4,0:10:12.03:0,12,135	1/1:5,11:16:19.02:172,19,0	1/1:3,11:15:19.44:193,19,0	1/1:4,18:25:47.02:361,47,0	0/0:4,0:11:15.03:0,15,158	0/0:11,0:26:59.60:0,60,587	0/0:12,0:21:26.63:0,27,325	0/0:10,0:10:24.66:0,25,234
chr10	56640459	.	TC	T	5651.42	PASS	AC=52;AF=0.963;AN=54;BaseQRankSum=-2.308;DP=252;FS=8.949;HRun=3;HaplotypeScore=41.4879;InbreedingCoeff=0.3692;MQ=55.06;MQ0=0;MQRankSum=-2.434;QD=23.07;ReadPosRankSum=0.606;VQSLOD=3.3480;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,14:15:27.08:333,27,0	1/1:0,4:4:9.03:111,9,0	./.	0/0:3,1:4:4.56:0,5,17	1/1:0,5:5:6.02:74,6,0	1/1:0,11:11:11.96:148,12,0	1/1:0,15:15:30.09:370,30,0	1/1:0,5:5:15.05:185,15,0	1/1:0,7:7:21.07:257,21,0	1/1:0,15:15:42.13:519,42,0	1/1:0,9:9:14.98:166,15,0	1/1:0,19:19:48.15:592,48,0	1/1:0,9:9:18.06:222,18,0	1/1:0,15:15:29.84:370,30,0	1/1:0,6:6:12.04:148,12,0	1/1:1,11:12:24.07:296,24,0	1/1:0,15:15:21.07:259,21,0	1/1:0,3:3:9.03:111,9,0	1/1:0,10:10:24.06:285,24,0	1/1:0,7:7:11.98:130,12,0	1/1:2,12:14:6.02:74,6,0	1/1:0,4:4:9.03:111,9,0	1/1:2,5:7:6.02:74,6,0	1/1:2,6:8:9.03:111,9,0	1/1:0,6:6:6.02:74,6,0	1/1:0,12:12:36.11:445,36,0	1/1:0,10:10:9.03:111,9,0	1/1:0,2:2:6.02:74,6,0
chr10	56641275	.	CCACACA	C	6431.23	PASS	AB=0.826;AC=22;AF=0.393;AN=56;BaseQRankSum=1.717;DP=688;FS=5.043;HRun=0;HaplotypeScore=153.7345;InbreedingCoeff=0.7423;MQ=62.75;MQ0=10;MQRankSum=-5.615;QD=24.27;ReadPosRankSum=1.541;VQSLOD=4.4907;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:45:57.15:0,57,1538	0/0:6,0:10:2.51:0,3,24	0/0:36,0:24:15.05:0,15,379	0/0:36,0:24:8.96:0,9,124	0/0:10,0:17:27.06:0,27,527	0/0:6,0:19:6.02:0,6,102	0/0:22,0:33:12.04:0,12,303	0/1:24,0:24:47.54:48,0,70	0/1:13,14:28:19.35:628,0,19	1/1:16,12:31:34.95:504,35,0	1/1:1,11:12:27.09:505,27,0	0/0:10,0:23:24.08:0,24,579	0/0:25,0:26:53.39:0,53,1684	0/0:20,0:21:45.12:0,45,1217	1/1:13,16:32:57.19:1124,57,0	0/0:12,0:18:18.05:0,18,384	0/0:21,0:44:63.13:0,63,1390	0/0:9,0:19:18.95:0,19,364	1/1:10,2:13:9.03:167,9,0	1/1:8,7:15:21.07:407,21,0	1/1:11,9:20:9.03:171,9,0	0/0:8,0:21:14.75:0,15,193	0/0:8,0:18:8.06:0,8,141	0/0:18,0:33:12.48:0,12,194	1/1:4,11:15:29.65:622,30,0	1/1:5,29:34:83.91:1464,84,0	1/1:10,16:26:39.60:783,40,0	1/1:4,0:12:4.86:10,5,0
chr10	56644701	.	CACA	C	945.03	PASS	AC=22;AF=0.407;AN=54;BaseQRankSum=9.516;DP=530;FS=2.118;HRun=0;HaplotypeScore=81.1376;InbreedingCoeff=0.8254;MQ=74.77;MQ0=5;MQRankSum=-0.032;QD=11.81;ReadPosRankSum=-7.410;VQSLOD=1.2976;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,132,2633	1/1:4,4:8:15.91:209,16,0	0/0:44,0:29:73.79:0,74,1097	0/0:37,0:29:60.36:0,60,1176	0/0:29,0:29:73.14:0,73,1476	0/0:28,0:28:80.96:0,81,1731	0/0:35,0:35:98.33:0,98,2116	1/1:5,20:25:34.38:406,34,0	1/1:8,0:8:8.66:77,9,0	1/1:4,0:5:4.20:30,4,0	1/1:2,0:2:6:53,6,0	0/0:24,0:24:69.19:0,69,1336	0/0:22,0:22:66.17:0,66,1294	0/0:17,0:17:44.35:0,44,782	1/1:6,0:8:11.88:98,12,0	0/0:26,0:26:78.27:0,78,1647	0/0:27,0:27:80.46:0,80,1525	0/0:22,0:22:63.15:0,63,1150	1/1:2,0:2:2.18:25,2,0	1/1:3,0:3:4.24:27,4,0	0/0:4,11:13:0.47:0,0,1	0/0:21,0:21:58.61:0,59,1165	0/0:21,0:21:63.15:0,63,1249	0/0:32,0:31:89.42:0,89,1627	1/1:2,0:2:4.55:28,5,0	1/1:4,0:5:3.88:27,4,0	1/1:11,0:11:15.94:158,16,0	./.
chr10	56645236	.	GGGT	G	37.01	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=1.110;DP=363;FS=6.207;HRun=0;HaplotypeScore=73.6164;InbreedingCoeff=0.6587;MQ=75.94;MQ0=1;MQRankSum=-1.025;QD=1.95;ReadPosRankSum=-3.387;VQSLOD=0.2365;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:17.71:0,18,123	1/1:5,2:7:3.66:73,4,0	0/0:16,0:12:11.43:0,11,291	0/0:16,0:14:18.37:0,18,232	0/0:8,0:8:5.99:0,6,85	0/0:11,0:11:23.97:0,24,201	0/0:30,0:30:62:0,62,554	1/1:10,2:12:8.83:64,9,0	0/0:6,0:6:11.90:0,12,117	0/0:9,0:9:11.92:0,12,117	0/0:6,0:6:13.99:0,14,104	0/0:24,0:24:44.96:0,45,337	0/0:8,0:8:11.43:0,11,166	0/0:18,0:18:45.73:0,46,560	0/0:18,0:18:35.36:0,35,411	0/0:20,0:20:33.75:0,34,226	0/0:36,0:36:58.86:0,59,492	0/0:14,0:14:22.13:0,22,237	0/0:5,0:5:12.86:0,13,100	0/0:5,0:5:8.07:0,8,73	0/0:16,0:16:27.68:0,28,318	0/0:7,0:7:8.99:0,9,75	0/0:9,0:9:14.42:0,14,129	0/0:21,0:21:32.78:0,33,308	0/0:5,0:5:12.01:0,12,205	0/0:9,0:9:16.23:0,16,154	0/0:10,0:10:18:0,18,243	0/0:6,0:6:12.01:0,12,182
chr10	56645239	.	TG	T	1953.75	PASS	AB=0.869;AC=21;AF=0.375;AN=56;BaseQRankSum=-2.209;DP=362;FS=41.498;HRun=11;HaplotypeScore=57.1525;InbreedingCoeff=0.3406;MQ=77.12;MQ0=1;MQRankSum=-1.392;QD=8.24;ReadPosRankSum=5.391;VQSLOD=-0.6148;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:11,1:12:13.21:0,13,113	0/0:6,0:6:2.32:0,2,30	0/1:14,1:11:6.76:7,0,78	0/1:19,0:16:13.50:13,0,70	0/0:7,0:7:3.01:0,3,32	1/1:1,9:10:20.98:172,21,0	1/1:13,16:30:61.50:473,62,0	0/0:13,0:13:6.87:0,7,51	0/0:6,0:6:11.03:0,11,89	0/0:9,0:9:5.92:0,6,38	0/0:7,0:7:8.05:0,8,69	0/1:14,9:23:26.89:209,0,27	0/0:9,0:9:11.98:0,12,108	0/0:16,1:17:7.69:0,8,246	0/1:13,2:15:24.80:25,0,143	0/1:14,6:21:27.37:130,0,27	1/1:18,13:33:59.96:412,60,0	1/1:6,8:14:28.39:211,28,0	0/1:6,1:7:17.11:17,0,18	0/0:4,0:4:0:0,0,0	0/0:14,0:14:20.01:0,20,156	1/1:2,5:7:8.99:74,9,0	1/1:3,7:11:16.34:128,16,0	1/1:12,9:21:35.87:254,36,0	0/0:5,0:5:9.02:0,9,96	0/0:10,0:10:13.25:0,13,116	0/1:10,1:11:12.68:13,0,62	0/0:6,0:6:9.02:0,9,96
chr10	56645476	.	TCTC	T	7874.42	PASS	AB=0.941;AC=19;AF=0.339;AN=56;BaseQRankSum=13.523;DP=580;FS=6.062;HRun=0;HaplotypeScore=83.4122;InbreedingCoeff=0.9438;MQ=83.19;MQ0=0;MQRankSum=-4.652;QD=36.46;ReadPosRankSum=6.211;VQSLOD=5.3413;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,105,2418	0/0:7,0:7:18.03:0,18,366	0/0:23,0:23:69.17:0,69,1445	0/0:22,0:22:63.21:0,63,1345	0/0:16,0:16:44.48:0,44,1034	1/1:0,21:21:57.20:971,57,0	1/1:3,20:22:42.14:715,42,0	0/0:23,0:23:69.22:0,69,1475	0/1:15,1:16:2.88:3,0,988	0/0:18,0:18:45.14:0,45,947	0/0:15,0:15:42.14:0,42,943	1/1:0,22:22:57.20:972,57,0	0/0:20,0:20:60.21:0,60,1373	0/0:15,0:15:45.15:0,45,1025	0/0:17,0:17:51.18:0,51,1167	1/1:1,16:17:39.13:664,39,0	1/1:2,28:30:75.26:1278,75,0	1/1:2,22:24:57.20:972,57,0	0/0:17,0:17:48.16:0,48,1106	0/0:7,0:7:18.06:0,18,411	0/0:54,0:54:99:0,160,3590	1/1:0,17:16:39.13:665,39,0	1/1:0,13:13:33.11:562,33,0	1/1:1,32:33:63.22:1073,63,0	0/0:7,0:7:21.07:0,21,483	0/0:24,0:24:66.23:0,66,1490	0/0:24,0:24:72.25:0,72,1631	0/0:15,0:15:45.15:0,45,1025
chr10	56648438	.	T	TAC	859.79	PASS	AB=0.722;AC=16;AF=0.471;AN=34;BaseQRankSum=-1.844;DP=485;FS=2.689;HRun=0;HaplotypeScore=78.1125;InbreedingCoeff=0.2425;MQ=24.54;MQ0=216;MQRankSum=1.984;QD=4.41;ReadPosRankSum=1.657;VQSLOD=2.0813;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:10:0:0,0,0	1/1:7,1:6:3.01:37,3,0	./.	./.	./.	1/1:7,5:8:3.01:37,3,0	./.	./.	./.	1/1:14,11:17:23.70:270,24,0	0/0:4,4:6:0:0,0,0	0/0:10,9:12:0.36:0,0,0	0/0:11,0:11:2.97:0,3,34	0/0:16,0:13:0.14:0,0,1	0/1:13,10:20:0.25:0,0,0	1/1:11,13:21:9.38:110,9,0	1/1:15,8:13:3.01:46,3,0	./.	0/1:10,3:5:1.72:57,0,2	./.	./.	0/0:5,6:11:0.47:0,0,1	0/0:3,2:6:0.47:0,0,1	./.	1/1:12,7:11:2.93:36,3,0	0/1:12,20:25:33.74:354,0,34	0/1:7,3:5:0.11:0,0,0	./.
chr10	56671067	.	A	AG	5125.81	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-12.521;DP=485;FS=2.838;HRun=6;HaplotypeScore=46.1849;InbreedingCoeff=0.9958;MQ=83.61;MQ0=0;MQRankSum=-1.906;QD=32.65;ReadPosRankSum=2.098;VQSLOD=4.9974;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:87.17:0,87,879	0/0:7,0:7:18.04:0,18,184	0/0:14,0:14:32.25:0,32,359	0/0:23,0:22:48:0,48,478	0/0:32,0:32:87.15:0,87,870	1/1:1,15:16:45.14:566,45,0	1/1:0,10:10:27.09:340,27,0	0/0:19,0:19:48.04:0,48,477	0/0:16,0:16:48.11:0,48,489	0/0:17,0:17:39.08:0,39,394	0/0:16,0:16:48.11:0,48,490	1/1:0,24:24:66.21:829,66,0	0/0:13,0:13:39.09:0,39,397	0/0:15,0:15:39.09:0,39,398	0/0:13,0:13:39.09:0,39,398	1/1:1,10:11:30.10:377,30,0	1/1:3,28:30:75.24:943,75,0	1/1:1,31:32:84.27:1052,84,0	0/0:15,0:15:39.05:0,39,383	0/0:18,0:18:48.11:0,48,489	0/0:14,0:14:42.10:0,42,429	1/1:1,6:7:18.06:226,18,0	1/1:2,7:9:18.06:226,18,0	1/1:1,16:17:45.14:566,45,0	0/0:18,0:18:54.12:0,54,551	0/0:18,0:18:48.11:0,48,490	0/0:15,0:15:45.10:0,45,459	0/0:12,0:12:30:0,30,286
chr10	56671575	.	AG	A	12492.81	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=12.035;DP=571;FS=5.018;HRun=5;HaplotypeScore=76.1372;InbreedingCoeff=0.9952;MQ=81.23;MQ0=0;MQRankSum=-2.024;QD=29.89;ReadPosRankSum=4.423;VQSLOD=5.4647;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:90.30:0,90,1229	0/0:7,0:7:21.06:0,21,271	0/0:21,1:21:26.15:0,26,738	0/0:17,0:17:29.22:0,29,458	0/0:14,0:14:33.11:0,33,452	1/1:1,25:26:66.19:749,66,0	1/1:2,25:27:57.16:647,57,0	0/0:18,0:18:45.14:0,45,601	1/1:3,18:21:54.15:613,54,0	1/1:1,23:24:69.20:781,69,0	1/1:1,7:8:21.06:238,21,0	1/1:1,28:29:78.22:885,78,0	0/0:19,0:19:57.19:0,57,775	0/0:24,0:24:69.21:0,69,927	1/1:3,26:29:75.21:851,75,0	1/1:1,18:19:51.15:578,51,0	1/1:3,29:32:84.24:953,84,0	1/1:0,14:14:39.11:437,39,0	1/1:2,11:13:33.08:366,33,0	1/1:0,12:12:36.10:408,36,0	1/1:2,35:37:93.26:1052,93,0	1/1:0,18:18:48.14:543,48,0	1/1:0,9:9:24.07:272,24,0	1/1:0,24:24:66.19:749,66,0	1/1:0,23:23:66.19:749,66,0	1/1:0,22:22:63.16:705,63,0	1/1:1,24:25:66.19:749,66,0	1/1:0,6:6:15.04:170,15,0
chr10	56672063	.	AT	A	10450.20	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=5.286;DP=694;FS=2.200;HRun=10;HaplotypeScore=78.3791;InbreedingCoeff=0.9790;MQ=72.85;MQ0=1;MQRankSum=-1.545;QD=19.79;ReadPosRankSum=3.420;VQSLOD=5.8108;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:52:99:0,120,1275	1/1:4,11:15:26.92:226,27,0	0/0:25,1:22:26.36:0,26,280	0/0:15,0:13:18.10:0,18,137	0/0:26,1:27:56.43:0,56,725	1/1:1,25:26:68.99:599,69,0	1/1:8,26:34:56.97:495,57,0	1/1:2,23:25:68.97:595,69,0	1/1:3,23:26:59.97:521,60,0	1/1:6,17:23:50.95:436,51,0	1/1:1,15:16:44.92:383,45,0	1/1:3,28:31:46.44:550,46,0	0/0:20,1:21:22.03:0,22,445	0/0:23,2:25:14.17:0,14,580	1/1:3,26:29:71.98:625,72,0	1/1:5,29:34:68.97:599,69,0	1/1:1,38:39:95.98:833,96,0	1/1:2,20:22:53.98:469,54,0	1/1:5,21:28:67.03:555,67,0	1/1:1,12:13:32.99:286,33,0	1/1:4,22:26:44.98:391,45,0	1/1:1,18:19:44.99:391,45,0	1/1:2,6:8:17.99:156,18,0	1/1:2,38:40:95.98:834,96,0	1/1:2,17:19:20.81:410,21,0	1/1:3,23:26:62.86:523,63,0	1/1:4,21:25:56.97:495,57,0	1/1:0,4:4:9:78,9,0
chr10	56672493	.	A	AGTGTGT	1938.47	PASS	AB=0.962;AC=29;AF=0.518;AN=56;BaseQRankSum=0.892;DP=675;FS=3.313;HRun=0;HaplotypeScore=176.2978;InbreedingCoeff=0.2846;MQ=66.38;MQ0=11;MQRankSum=-2.458;QD=4.45;ReadPosRankSum=-2.592;VQSLOD=2.2751;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,102,1663	1/1:3,0:3:5.94:42,6,0	0/0:36,0:18:35.42:0,35,382	0/0:43,0:27:36.81:0,37,689	0/0:28,0:28:65.98:0,66,1054	0/1:10,0:18:37.64:38,0,38	1/1:36,0:38:23.56:349,24,0	0/1:23,0:22:5.38:66,0,5	0/1:21,0:21:53.84:54,0,92	0/0:14,0:13:8.11:0,8,121	0/1:9,0:9:14.95:15,0,52	1/1:9,17:29:11.39:434,11,0	0/0:34,0:33:71.06:0,71,1209	0/0:25,0:25:60.11:0,60,910	0/1:21,0:21:4.64:5,0,214	1/1:11,19:33:18.03:430,18,0	0/1:29,0:30:0.34:0,0,292	0/1:29,0:29:84.26:84,0,395	1/1:19,0:19:9.09:45,9,0	1/1:6,0:6:4.84:31,5,0	0/1:54,0:54:71.87:72,0,138	1/1:7,4:13:0.07:0,0,0	1/1:9,0:9:2.37:59,2,0	1/1:18,1:35:12.28:206,12,0	1/1:28,0:29:4.42:181,4,0	0/1:16,0:16:4.58:5,0,149	0/0:14,0:14:8.06:0,8,177	0/0:5,0:4:3.90:0,4,47
chr10	56672506	.	GTA	G	5300.89	PASS	AB=0.955;AC=34;AF=0.607;AN=56;BaseQRankSum=-4.023;DP=712;FS=5.372;HRun=0;HaplotypeScore=119.1835;InbreedingCoeff=0.2528;MQ=56.52;MQ0=22;MQRankSum=-1.873;QD=11.02;ReadPosRankSum=-5.451;VQSLOD=3.2232;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,103,1449	1/1:4,0:4:5.94:42,6,0	0/0:42,0:14:29:0,29,276	0/0:53,0:19:33.31:0,33,407	0/0:28,0:28:47.80:0,48,768	0/1:20,0:20:7.55:95,0,8	1/1:38,0:39:26.99:407,27,0	1/1:27,0:26:71.61:564,72,0	1/1:21,0:21:6.69:293,7,0	0/1:12,0:11:11.93:155,0,12	0/1:9,0:9:5.35:82,0,5	1/1:32,0:31:15.91:160,16,0	0/0:33,0:32:42.53:0,43,983	0/0:28,0:28:43.83:0,44,658	0/1:21,2:23:31.37:402,0,31	0/1:31,0:31:7.81:73,0,8	0/1:29,2:31:7.33:437,0,7	0/1:25,4:29:63.73:399,0,64	1/1:15,0:15:28.42:209,28,0	1/1:7,0:7:0.75:82,1,0	1/1:54,0:54:8.65:579,9,0	1/1:16,0:15:5.98:50,6,0	1/1:12,0:12:13.94:95,14,0	1/1:38,0:38:18.59:284,19,0	1/1:28,0:28:41.41:437,41,0	0/1:12,2:14:0.69:231,0,1	0/1:14,1:15:25.46:186,0,25	0/1:4,0:3:11.49:37,0,11
chr10	56672971	.	G	GCACACACACACACACA	11616.73	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=-0.273;DP=692;FS=8.551;HRun=0;HaplotypeScore=286.0890;InbreedingCoeff=0.7048;MQ=52.91;MQ0=10;MQRankSum=-8.691;QD=23.90;ReadPosRankSum=-4.324;VQSLOD=1.9785;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:58:87.25:0,87,3243	1/1:7,0:7:2.99:24,3,0	0/0:35,0:26:12.04:0,12,266	0/0:25,0:17:2.94:0,3,362	0/0:12,0:14:24.07:0,24,826	1/1:22,0:22:12.03:390,12,0	1/1:33,0:36:21.07:1051,21,0	1/1:19,0:16:21.07:691,21,0	1/1:25,1:29:18.06:1270,18,0	1/1:20,0:19:17.99:716,18,0	0/0:9,0:8:0.47:0,0,1	1/1:21,1:23:6.02:267,6,0	0/0:30,0:32:57.16:0,57,2080	0/0:29,0:33:33.30:0,33,2775	1/1:25,0:29:9.03:520,9,0	1/1:32,4:40:12.36:687,12,0	1/1:25,5:30:15.05:975,15,0	1/1:9,4:17:17.09:786,17,0	1/1:17,0:17:29.49:683,29,0	1/1:21,0:20:6.02:138,6,0	1/1:37,0:36:5.52:97,6,0	1/1:18,0:21:3.95:130,4,0	1/1:14,0:14:6.01:111,6,0	1/1:22,3:27:3.01:169,3,0	1/1:11,0:12:3.01:129,3,0	1/1:29,0:29:42.09:1488,42,0	1/1:20,0:17:12.04:565,12,0	1/1:7,0:6:12.04:728,12,0
chr10	56672977	.	A	ACACACACACACACACACACA	11586.08	PASS	AC=42;AF=0.778;AN=54;BaseQRankSum=-0.087;DP=733;FS=5.098;HRun=0;HaplotypeScore=340.2639;InbreedingCoeff=0.7186;MQ=51.43;MQ0=11;MQRankSum=-7.881;QD=22.37;ReadPosRankSum=-3.615;VQSLOD=2.1731;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:59,0:59:90.26:0,90,3893	1/1:8,0:8:2.99:24,3,0	0/0:38,0:25:12.04:0,12,266	0/0:29,0:16:2.92:0,3,376	0/0:15,0:15:24.07:0,24,994	1/1:24,0:24:11.72:344,12,0	1/1:46,0:45:21.07:910,21,0	1/1:20,0:17:21.07:696,21,0	1/1:28,0:27:18.06:1284,18,0	1/1:17,1:22:30.06:999,30,0	./.	1/1:23,0:23:6.02:220,6,0	0/0:31,0:31:57.15:0,57,2455	0/0:35,0:35:33.30:0,33,3287	1/1:34,0:32:9.03:544,9,0	1/1:38,0:37:12.36:607,12,0	1/1:29,0:28:18.06:997,18,0	1/1:19,0:19:17.09:712,17,0	1/1:19,0:19:32.60:785,33,0	1/1:23,0:22:6.02:138,6,0	1/1:40,0:38:5.25:97,5,0	1/1:24,0:23:3.94:102,4,0	1/1:18,0:18:5.87:111,6,0	1/1:31,0:30:3.01:142,3,0	1/1:15,0:14:3.01:101,3,0	1/1:28,0:28:42.09:1502,42,0	1/1:21,0:18:12.04:531,12,0	1/1:7,0:6:12.04:740,12,0
chr10	56673752	.	C	CGTGT	17716.53	PASS	AB=0.661;AC=38;AF=0.679;AN=56;BaseQRankSum=2.579;DP=965;FS=2.532;HRun=0;HaplotypeScore=188.3674;InbreedingCoeff=0.5204;MQ=59.92;MQ0=5;MQRankSum=-0.619;QD=23.10;ReadPosRankSum=1.492;VQSLOD=4.5191;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:46:99:0,114,1756	0/1:7,0:8:0:0,0,0	0/0:27,0:11:11.90:0,12,160	0/0:18,0:8:2.51:0,3,46	0/0:24,0:24:54.17:0,54,873	1/1:5,0:23:43.91:199,44,0	0/1:15,0:42:30.72:217,0,31	1/1:33,0:36:39.12:674,39,0	1/1:9,17:28:56.66:1280,57,0	1/1:21,14:40:52.71:965,53,0	1/1:8,6:15:20.41:394,20,0	0/1:25,0:59:29.51:420,0,30	0/0:42,0:43:93.29:0,93,1475	0/0:38,0:38:99:0,99,1567	1/1:7,27:40:82.96:1756,83,0	0/1:18,0:36:99:194,0,129	1/1:5,0:43:65.47:380,65,0	1/1:9,0:36:63.38:299,63,0	1/1:8,4:12:12.04:287,12,0	1/1:6,11:18:23.76:530,24,0	1/1:33,66:113:99:3412,160,0	0/1:11,0:32:89.50:167,0,90	0/1:4,0:16:13.93:113,0,14	1/1:10,1:36:66.37:369,66,0	1/1:5,18:26:50.91:1196,51,0	1/1:17,24:47:93.03:2032,93,0	1/1:14,22:40:92.26:1946,92,0	1/1:1,15:16:36.12:888,36,0
chr10	56673837	.	AGT	A	6561.50	PASS	AB=0.906;AC=29;AF=0.518;AN=56;BaseQRankSum=10.547;DP=875;FS=19.988;HRun=0;HaplotypeScore=128.1278;InbreedingCoeff=0.1724;MQ=64.05;MQ0=11;MQRankSum=1.117;QD=9.85;ReadPosRankSum=1.463;VQSLOD=3.2905;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:47,7:53:77.69:78,0,1079	0/0:4,0:16:8.33:0,8,62	0/0:33,0:21:6.02:0,6,89	0/0:33,0:21:3.01:0,3,46	0/1:19,3:22:3.22:3,0,500	1/1:13,7:21:23.38:234,23,0	1/1:13,20:38:63.58:617,64,0	0/0:25,0:24:21.89:0,22,266	0/0:33,2:35:0.86:0,1,876	0/1:26,1:27:32.09:32,0,426	0/1:15,1:17:1.08:1,0,402	1/1:11,37:50:99:1176,108,0	0/1:24,6:31:99:142,0,606	0/1:26,4:30:48.40:48,0,611	0/1:26,3:30:36.40:36,0,726	1/1:5,23:30:77.72:837,78,0	1/1:22,19:41:76.87:762,77,0	1/1:9,13:24:47.44:470,47,0	0/1:30,2:33:55.44:55,0,243	0/1:13,1:14:1.07:1,0,426	0/1:73,3:74:37.67:38,0,1195	1/1:13,10:26:53.65:553,54,0	1/1:8,20:29:53.99:595,54,0	1/1:17,19:37:77.66:814,78,0	0/1:27,2:28:68.35:68,0,356	0/0:31,1:33:6.28:0,6,609	0/0:18,1:19:1.94:0,2,474	0/0:12,0:13:12.96:0,13,342
chr10	56674237	.	A	AG	24920.41	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-14.082;DP=758;FS=14.537;HRun=0;HaplotypeScore=74.5958;InbreedingCoeff=0.9994;MQ=90.74;MQ0=1;MQRankSum=-7.635;QD=43.42;ReadPosRankSum=2.946;VQSLOD=4.0232;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:96.32:0,96,1340	1/1:0,8:9:27.09:421,27,0	0/0:32,0:32:93.14:0,93,1215	0/0:27,0:28:78.18:0,78,932	0/0:34,0:34:99:0,99,1384	1/1:0,20:20:54.18:863,54,0	1/1:0,29:29:78.27:1247,78,0	1/1:1,31:32:93.29:1429,93,0	1/1:0,32:32:84.29:1342,84,0	1/1:1,22:23:66.20:1029,66,0	1/1:0,13:13:30.10:479,30,0	1/1:0,30:30:81.28:1292,81,0	0/0:33,0:33:99:0,99,1379	0/0:25,0:25:75.25:0,75,1038	1/1:2,49:51:99:2176,138,0	1/1:2,51:53:99:2253,141,0	1/1:0,17:17:51.17:815,51,0	1/1:1,13:14:36.12:575,36,0	1/1:1,17:18:48.15:745,48,0	1/1:0,22:22:63.21:996,63,0	1/1:2,39:40:99:1774,111,0	1/1:0,21:21:63.15:976,63,0	1/1:0,17:17:47.77:767,48,0	1/1:1,30:31:90.31:1438,90,0	1/1:0,14:14:39.13:623,39,0	1/1:2,32:34:96.31:1510,96,0	1/1:1,41:42:99:1739,111,0	1/1:0,11:11:27.09:431,27,0
chr10	56675113	.	AC	A	37.48	PASS	AC=2;AF=0.037;AN=54;BaseQRankSum=1.753;DP=216;FS=5.262;HRun=7;HaplotypeScore=28.5315;InbreedingCoeff=0.3109;MQ=85.50;MQ0=1;MQRankSum=-1.178;QD=6.25;ReadPosRankSum=0.738;VQSLOD=-0.6397;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:57.18:0,57,716	0/0:4,0:4:9.03:0,9,108	0/0:14,0:9:14.78:0,15,130	0/0:13,0:11:22.69:0,23,166	./.	0/0:3,0:3:3.01:0,3,38	0/0:20,0:20:48.14:0,48,588	0/0:6,0:6:3:0,3,27	0/0:1,0:1:3.01:0,3,38	0/0:3,0:3:9.03:0,9,113	0/0:1,0:1:3.01:0,3,38	0/0:10,0:10:30.09:0,30,365	0/0:3,0:3:9.03:0,9,113	0/0:7,0:7:18.06:0,18,226	0/0:4,0:4:9.03:0,9,113	0/0:6,0:6:18.06:0,18,226	0/0:12,0:12:33.10:0,33,410	0/0:7,0:7:13.86:0,14,156	0/0:1,0:1:3.01:0,3,38	0/0:1,0:1:3.01:0,3,37	0/0:31,0:31:75.24:0,75,941	1/1:1,5:6:12.03:122,12,0	0/0:3,0:3:9.03:0,9,113	0/0:14,0:14:39.07:0,39,460	0/0:7,0:7:12.04:0,12,150	0/0:6,0:6:15.05:0,15,188	0/0:9,0:9:24.08:0,24,301	0/0:2,0:2:2.99:0,3,23
chr10	56677243	.	GCTCT	G	918.05	PASS	AB=0.928;AC=21;AF=0.375;AN=56;BaseQRankSum=3.866;DP=634;FS=17.847;HRun=0;HaplotypeScore=118.9345;InbreedingCoeff=0.3132;MQ=64.82;MQ0=22;MQRankSum=-1.614;QD=3.76;ReadPosRankSum=1.245;VQSLOD=1.3592;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:53:66.45:0,66,768	0/0:13,0:13:2.97:0,3,20	0/0:25,0:12:0:0,0,0	0/0:52,0:26:0:0,0,0	0/1:20,0:20:10.45:10,0,50	0/0:15,0:23:10.85:0,11,153	0/0:19,0:19:3.92:0,4,406	0/0:26,0:26:6.36:0,6,53	1/1:6,0:10:14.04:116,14,0	0/0:16,0:15:3.06:0,3,8	1/1:8,0:12:2.80:13,3,0	0/1:28,1:28:99:107,0,538	0/0:28,0:28:25.80:0,26,233	0/0:23,0:23:8.98:0,9,116	1/1:14,12:26:6.59:95,7,0	0/0:22,0:20:25.81:0,26,354	0/1:22,3:25:47.25:113,0,47	1/1:18,2:20:2.01:170,2,0	1/1:13,0:9:4.56:32,5,0	0/1:15,0:17:8.53:55,0,9	0/0:27,0:27:3.40:0,3,36	0/0:18,0:18:18.23:0,18,173	0/0:18,0:20:11.76:0,12,156	0/0:25,0:24:24.27:0,24,455	1/1:2,9:13:10.57:106,11,0	0/1:29,0:30:22.38:113,0,22	1/1:8,0:18:1.07:145,1,0	1/1:6,0:4:0.47:1,0,0
chr10	56678659	.	GC	G	377.56	PASS	AB=0.807;AC=22;AF=0.407;AN=54;BaseQRankSum=1.050;DP=191;FS=7.433;HRun=11;HaplotypeScore=31.2533;InbreedingCoeff=0.3478;MQ=92.48;MQ0=1;MQRankSum=0.604;QD=4.06;ReadPosRankSum=0.499;VQSLOD=-0.4935;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:19:19.77:0,20,233	./.	0/0:16,0:12:14.69:0,15,120	0/0:14,0:10:0.40:0,0,82	0/0:4,0:4:3.01:0,3,32	0/0:3,0:3:5.94:0,6,43	0/1:6,1:7:12.61:13,0,84	0/0:5,0:6:2.97:0,3,20	1/1:0,2:2:3:25,3,0	1/1:0,2:2:5.99:49,6,0	1/1:4,0:4:2.66:24,3,0	0/0:6,0:6:12.38:0,12,93	0/0:6,0:6:11.94:0,12,102	0/0:4,0:4:8.96:0,9,70	0/1:5,7:12:47.91:78,0,48	0/0:4,0:4:8.93:0,9,71	0/1:12,3:15:19.42:19,0,225	0/0:6,0:6:18:0,18,168	1/1:0,1:1:3:25,3,0	1/1:1,2:3:2.97:25,3,0	1/1:17,11:28:17.90:148,18,0	0/0:2,0:2:0:0,0,0	0/0:2,0:2:6:0,6,53	0/1:7,1:8:6.59:7,0,142	1/1:1,0:1:2.94:18,3,0	1/1:2,4:6:11.97:98,12,0	0/0:2,1:3:0:0,0,0	1/1:4,0:4:3.06:8,3,0
chr10	56680748	.	GT	G	9560.83	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=15.445;DP=838;FS=1.169;HRun=4;HaplotypeScore=79.4524;InbreedingCoeff=0.9999;MQ=84.60;MQ0=0;MQRankSum=-2.768;QD=32.63;ReadPosRankSum=5.017;VQSLOD=5.2151;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,102,1390	0/0:13,0:13:39.13:0,39,546	0/0:32,0:32:87.02:0,87,1112	0/0:18,0:17:42.11:0,42,557	0/0:30,0:30:90.27:0,90,1224	1/1:0,17:17:45.14:540,45,0	1/1:2,22:24:57.16:673,57,0	0/0:34,0:34:90.28:0,90,1216	0/0:26,0:26:78.25:0,78,1075	0/0:32,0:32:93.31:0,93,1302	0/0:15,0:15:42.13:0,42,568	1/1:2,56:58:99:1944,162,0	0/0:28,0:28:84.27:0,84,1159	0/0:43,0:43:99:0,123,1716	0/0:38,0:38:99:0,114,1563	1/1:2,56:58:99:1908,159,0	1/1:2,33:35:99:1188,99,0	1/1:0,25:25:69.21:828,69,0	0/0:21,0:21:63.20:0,63,864	0/0:28,0:28:84.27:0,84,1160	0/0:57,0:57:99:0,157,2150	1/1:0,21:21:54.17:648,54,0	1/1:0,24:24:63.19:754,63,0	1/1:1,30:31:90.28:1080,90,0	0/0:16,0:16:48.16:0,48,672	0/0:36,0:36:99:0,108,1509	0/0:33,0:33:96.32:0,96,1326	0/0:11,0:11:33.11:0,33,462
chr10	56682210	.	A	AC	3771.62	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=6.449;DP=456;FS=3.760;HRun=7;HaplotypeScore=56.2273;InbreedingCoeff=0.9618;MQ=60.94;MQ0=7;MQRankSum=-2.174;QD=23.43;ReadPosRankSum=2.007;VQSLOD=4.0764;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:75.09:0,75,715	0/0:5,0:4:12.02:0,12,116	0/0:13,0:10:9.07:0,9,195	0/0:12,0:8:21.02:0,21,197	0/0:23,0:23:63.04:0,63,597	1/1:5,8:12:29.91:311,30,0	1/1:6,26:30:57.17:686,57,0	0/0:25,0:22:50.95:0,51,462	0/0:8,0:8:24.02:0,24,225	0/0:14,0:14:35.96:0,36,329	0/0:7,0:7:18.03:0,18,173	1/1:2,11:12:20.98:254,21,0	0/0:25,0:25:66.05:0,66,623	0/0:19,0:19:54.06:0,54,511	0/0:10,0:10:30.05:0,30,289	1/1:3,26:29:51.16:616,51,0	1/1:1,22:23:48.15:578,48,0	1/1:1,12:13:36.11:434,36,0	0/0:12,0:9:24:0,24,223	0/0:13,0:13:35.87:0,36,323	0/0:31,0:31:87.11:0,87,826	1/1:0,14:14:30.01:343,30,0	1/1:1,7:8:18.05:216,18,0	1/1:3,12:16:7.05:335,7,0	0/0:8,0:8:18.02:0,18,170	0/0:21,0:21:57.04:0,57,537	0/0:14,0:14:39.03:0,39,368	0/0:6,0:5:12.02:0,12,116
chr10	56682231	.	T	TTG	940.35	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-4.962;DP=506;FS=5.155;HRun=0;HaplotypeScore=89.0145;InbreedingCoeff=0.9717;MQ=67.15;MQ0=0;MQRankSum=-0.276;QD=28.50;ReadPosRankSum=-4.695;VQSLOD=3.3265;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:81.25:0,81,1009	1/1:5,3:7:21.05:299,21,0	0/0:23,0:19:20.19:0,20,256	0/0:23,0:20:29.10:0,29,425	0/0:30,0:30:72.23:0,72,908	0/0:13,0:12:27.05:0,27,323	0/0:25,0:25:51.12:0,51,622	1/1:8,17:24:48.15:762,48,0	0/0:9,0:9:27.09:0,27,340	0/0:18,0:18:42.12:0,42,518	0/0:12,0:12:32.97:0,33,385	0/0:11,0:11:18.06:0,18,227	0/0:23,0:24:59.98:0,60,705	0/0:23,0:23:60.19:0,60,755	0/0:13,0:13:30.10:0,30,375	0/0:30,0:30:63.08:0,63,742	0/0:22,0:22:39.12:0,39,491	0/0:13,0:12:21.07:0,21,265	0/0:9,0:9:21.06:0,21,253	0/0:13,0:13:36.11:0,36,452	0/0:36,0:36:75.23:0,75,934	0/0:14,0:14:33.10:0,33,414	0/0:9,0:9:18.06:0,18,227	0/0:14,0:14:24.08:0,24,303	0/0:8,0:8:15.05:0,15,189	0/0:22,0:22:57.18:0,57,719	0/0:18,0:18:45.12:0,45,539	0/0:11,0:11:27.06:0,27,314
chr10	56682305	.	C	CTTT	4153.38	PASS	AB=0.644;AC=39;AF=0.696;AN=56;BaseQRankSum=9.080;DP=393;FS=4.994;HRun=10;HaplotypeScore=76.8103;InbreedingCoeff=0.5628;MQ=62.64;MQ0=3;MQRankSum=-2.683;QD=14.03;ReadPosRankSum=1.519;VQSLOD=1.1188;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:51.11:0,51,618	1/1:0,0:6:6.23:15,6,0	0/0:13,0:7:11.68:0,12,115	0/0:7,0:7:6.01:0,6,73	0/0:23,0:22:35.72:0,36,435	1/1:2,13:16:36.12:687,36,0	1/1:3,3:6:14.97:211,15,0	1/1:8,0:35:34.10:91,34,0	1/1:2,0:8:9.85:25,10,0	1/1:2,0:12:9.97:23,10,0	1/1:2,0:14:15.45:52,15,0	1/1:4,3:7:14.97:214,15,0	0/0:13,0:13:30.03:0,30,365	0/0:17,0:17:39.10:0,39,461	0/1:2,0:14:16.93:17,0,19	1/1:7,11:18:30.10:563,30,0	1/1:9,18:28:60.14:1081,60,0	1/1:2,6:6:15.05:288,15,0	1/1:2,0:13:13.71:32,14,0	0/1:4,0:16:18.28:23,0,18	1/1:3,0:9:4.98:12,5,0	0/1:2,0:2:0:0,0,0	1/1:2,6:9:21.05:367,21,0	1/1:7,4:11:17.97:268,18,0	0/1:2,0:9:14.26:14,0,26	1/1:4,0:17:22.65:97,23,0	1/1:2,0:17:14.51:56,15,0	0/1:3,0:17:17.21:17,0,19
chr10	56682646	.	A	ATTT	1974.42	PASS	AB=0.929;AC=28;AF=0.500;AN=56;BaseQRankSum=-2.172;DP=290;FS=13.813;HRun=15;HaplotypeScore=69.4507;InbreedingCoeff=0.6684;MQ=59.79;MQ0=7;MQRankSum=-2.939;QD=12.66;ReadPosRankSum=-2.736;VQSLOD=-0.5951;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:18:27.54:0,28,281	0/1:3,0:5:0.14:0,0,24	0/0:22,0:9:2.92:0,3,30	0/1:14,0:11:18.60:33,0,19	0/0:10,0:8:11.74:0,12,118	0/0:14,0:16:29.33:0,29,274	0/0:7,0:7:14.64:0,15,147	1/1:9,0:17:4.05:51,4,0	1/1:3,2:5:6.02:101,6,0	1/1:6,5:12:21.04:318,21,0	1/1:5,2:8:14.96:193,15,0	0/1:13,0:12:4.96:5,0,112	0/0:5,0:6:11.68:0,12,94	0/0:4,0:3:2.80:0,3,29	1/1:4,7:12:18.04:278,18,0	0/0:9,0:7:8.82:0,9,88	0/0:17,0:16:40.53:0,41,409	0/0:12,0:11:23.94:0,24,236	1/1:8,0:9:15.03:125,15,0	1/1:2,1:6:14.98:169,15,0	1/1:3,3:6:11.98:140,12,0	0/1:3,0:3:0:0,0,0	0/0:4,0:4:5.84:0,6,59	0/0:8,0:8:18.03:0,18,177	1/1:7,2:11:12.02:175,12,0	1/1:12,3:15:16.29:226,16,0	1/1:5,4:9:9.01:125,9,0	1/1:3,1:7:18.02:231,18,0
chr10	56682673	.	TC	T	1333.46	PASS	AB=1.000;AC=17;AF=0.315;AN=54;BaseQRankSum=3.481;DP=283;FS=3.173;HRun=3;HaplotypeScore=39.6858;InbreedingCoeff=0.7682;MQ=55.51;MQ0=16;MQRankSum=-0.866;QD=14.65;ReadPosRankSum=4.203;VQSLOD=2.8971;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:47.97:0,48,618	0/0:8,0:7:6.56:0,7,37	0/1:10,0:4:1.07:1,0,9	0/0:5,0:5:2.07:0,2,15	0/0:9,0:8:8.85:0,9,108	1/1:2,9:11:33.01:372,33,0	1/1:0,7:7:15.05:182,15,0	0/0:17,0:11:4.31:0,4,91	0/0:6,0:6:15.05:0,15,209	0/0:17,0:16:42.09:0,42,540	0/0:15,0:13:23.90:0,24,268	1/1:7,3:9:5.96:56,6,0	0/0:8,0:8:18.05:0,18,234	0/0:8,0:7:18.03:0,18,217	0/0:13,0:13:33.09:0,33,428	1/1:3,7:8:3.01:37,3,0	1/1:11,7:18:30.04:351,30,0	1/1:6,4:10:21.07:259,21,0	0/0:10,0:9:24.08:0,24,334	0/0:12,0:12:23.99:0,24,293	0/0:7,0:6:9.02:0,9,108	./.	1/1:1,3:3:3.01:37,3,0	1/1:5,5:10:18.06:221,18,0	0/0:8,0:8:12.03:0,12,150	0/0:10,0:10:30.04:0,30,366	0/0:10,0:9:21.02:0,21,270	0/0:6,0:4:11.94:0,12,125
chr10	56682754	.	A	AT	4483.40	PASS	AB=0.647;AC=37;AF=0.661;AN=56;BaseQRankSum=-3.163;DP=421;FS=0.524;HRun=13;HaplotypeScore=52.0948;InbreedingCoeff=0.4371;MQ=66.03;MQ0=3;MQRankSum=-1.730;QD=13.63;ReadPosRankSum=-0.025;VQSLOD=5.0172;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:38.60:0,39,267	1/1:2,0:3:2.84:14,3,0	0/0:14,1:8:6.49:0,6,31	0/0:12,0:8:12.67:0,13,70	0/0:9,1:10:23.80:0,24,164	1/1:4,13:19:15.14:259,15,0	1/1:5,12:15:15.98:237,16,0	1/1:10,1:19:28.64:155,29,0	1/1:2,6:8:12.01:111,12,0	1/1:6,7:13:3.45:172,3,0	1/1:8,15:24:18.25:292,18,0	0/1:8,13:20:16.74:253,0,17	0/0:13,0:13:29.69:0,30,204	0/0:18,0:20:36.63:0,37,234	1/1:5,14:19:15.47:286,15,0	1/1:5,7:13:26.56:244,27,0	1/1:3,25:28:69:629,69,0	1/1:3,15:19:8.61:252,9,0	1/1:6,10:16:35.65:297,36,0	1/1:4,7:11:12.01:112,12,0	0/1:5,10:15:17.09:143,0,17	1/1:2,1:3:3:28,3,0	0/1:3,0:3:0:0,0,0	1/1:1,12:13:30.03:279,30,0	0/1:2,15:17:2.56:121,0,3	0/1:8,11:18:5.29:229,0,5	0/1:5,16:23:17.94:299,0,18	0/1:1,3:4:8.56:72,0,9
chr10	56682976	.	C	CT	2853.02	PASS	AB=0.625;AC=21;AF=0.375;AN=56;BaseQRankSum=-6.422;DP=458;FS=3.177;HRun=11;HaplotypeScore=46.1031;InbreedingCoeff=0.8433;MQ=73.10;MQ0=0;MQRankSum=-1.325;QD=17.50;ReadPosRankSum=1.274;VQSLOD=4.5962;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:65.11:0,65,497	0/0:8,0:8:20.92:0,21,163	0/0:13,0:10:9.10:0,9,58	0/0:13,0:13:5.67:0,6,82	0/0:18,0:20:43.85:0,44,331	0/0:17,0:18:40.85:0,41,305	0/0:14,0:14:35.84:0,36,278	0/0:29,0:29:33.83:0,34,271	1/1:2,4:6:18.03:178,18,0	1/1:3,16:19:45.09:455,45,0	1/1:4,10:14:30.06:305,30,0	0/0:21,1:22:14.29:0,14,293	0/0:20,0:20:53.35:0,53,400	0/0:15,0:15:35.84:0,36,279	1/1:2,19:21:24.86:432,25,0	0/0:14,0:16:31.86:0,32,234	0/0:23,0:24:49.38:0,49,373	0/0:33,0:33:88.53:0,89,664	1/1:4,6:10:13.75:176,14,0	1/1:5,10:15:27.05:274,27,0	1/1:3,7:10:15.03:152,15,0	0/0:3,0:3:5.20:0,5,30	0/0:12,1:13:2.40:0,2,198	0/0:7,0:7:17.93:0,18,139	0/1:8,12:20:16.36:214,0,16	1/1:5,14:19:30.10:338,30,0	1/1:3,15:18:21.81:390,22,0	1/1:1,10:11:15.03:152,15,0
chr10	56684180	.	T	TA	1932.52	PASS	AB=0.905;AC=21;AF=0.375;AN=56;BaseQRankSum=-4.251;DP=458;FS=1.512;HRun=13;HaplotypeScore=62.2062;InbreedingCoeff=0.6638;MQ=60.18;MQ0=21;MQRankSum=-1.367;QD=9.76;ReadPosRankSum=0.473;VQSLOD=2.9283;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:29,2:32:17.13:17,0,308	0/0:8,0:8:11.88:0,12,82	0/0:16,0:11:2.02:0,2,51	0/0:8,0:4:6.31:0,6,29	0/0:17,0:19:24.64:0,25,147	1/1:9,10:17:6.45:202,6,0	1/1:2,11:12:24.03:223,24,0	0/0:32,0:29:50.33:0,50,405	0/0:11,0:10:23.76:0,24,162	0/0:19,0:21:47.82:0,48,313	0/1:14,3:17:17.74:18,0,219	1/1:3,12:15:20.86:194,21,0	0/0:14,0:14:29.74:0,30,205	0/0:8,0:8:11.85:0,12,82	0/0:26,0:25:62.40:0,62,428	1/1:2,12:14:21.30:328,21,0	1/1:12,17:24:35.61:498,36,0	1/1:12,8:19:26.26:314,26,0	0/0:18,0:14:1.79:0,2,106	0/0:14,0:14:26.69:0,27,183	0/0:5,0:3:2.90:0,3,20	1/1:2,3:6:8.85:70,9,0	1/1:3,3:6:9.01:84,9,0	1/1:1,8:10:20.86:181,21,0	0/0:12,0:12:13.92:0,14,99	0/1:11,1:11:1.06:1,0,137	0/0:23,1:23:19.58:0,20,280	0/0:24,0:17:47.20:0,47,318
chr10	56684292	.	A	AACACAC	8925.67	PASS	AB=1.000;AC=45;AF=0.804;AN=56;BaseQRankSum=-1.050;DP=514;FS=2.244;HRun=0;HaplotypeScore=128.4018;InbreedingCoeff=0.6937;MQ=53.35;MQ0=7;MQRankSum=-5.464;QD=22.60;ReadPosRankSum=-2.082;VQSLOD=3.9061;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:31:45.14:0,45,856	1/1:2,1:6:6.02:121,6,0	0/0:25,0:15:3.01:0,3,55	0/0:28,0:20:5.22:0,5,36	0/1:12,0:12:9.78:10,0,233	1/1:7,0:8:3.01:39,3,0	1/1:17,8:23:30.10:660,30,0	1/1:17,1:23:24.07:454,24,0	1/1:5,2:11:15.05:274,15,0	1/1:9,2:16:21.07:467,21,0	1/1:4,8:14:12.04:331,12,0	1/1:14,1:15:5.70:86,6,0	0/0:17,0:17:30.06:0,30,510	0/0:14,0:16:27.08:0,27,483	1/1:10,5:19:18.06:426,18,0	1/1:18,6:25:36.12:867,36,0	1/1:16,6:25:36.12:933,36,0	1/1:15,2:18:15.90:471,16,0	1/1:13,9:20:42.09:905,42,0	1/1:4,3:13:21.07:426,21,0	1/1:22,2:39:15.31:235,15,0	1/1:4,2:7:11.95:249,12,0	1/1:7,1:8:6.01:69,6,0	1/1:13,2:17:8.37:161,8,0	1/1:9,8:19:18.05:472,18,0	1/1:15,3:17:27.08:597,27,0	1/1:10,5:17:12.04:265,12,0	1/1:4,2:11:18.06:409,18,0
chr10	56684358	.	TAAG	T	4908.89	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=12.148;DP=490;FS=1.867;HRun=0;HaplotypeScore=91.5187;InbreedingCoeff=0.9773;MQ=70.73;MQ0=2;MQRankSum=-4.303;QD=32.95;ReadPosRankSum=2.563;VQSLOD=5.4115;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:72.25:0,72,1513	0/0:4,0:4:12.04:0,12,242	0/0:12,0:11:18.02:0,18,293	0/0:22,0:22:7.18:0,7,743	0/0:16,0:16:42.14:0,42,824	1/1:1,9:9:24.04:339,24,0	1/1:5,14:19:30.10:456,30,0	0/0:30,0:30:69.23:0,69,1440	0/0:15,0:15:45.15:0,45,958	0/0:16,0:16:45.15:0,45,966	0/0:12,0:12:33.11:0,33,680	1/1:2,13:15:30.06:423,30,0	0/0:17,0:17:42.10:0,42,843	0/0:17,0:17:36.12:0,36,721	0/0:24,0:24:60.21:0,60,1288	1/1:4,27:31:72.18:1045,72,0	1/1:2,20:22:54.18:820,54,0	1/1:1,21:22:57.15:833,57,0	0/0:21,0:21:60.16:0,60,1196	0/0:13,0:13:33.11:0,33,674	0/0:36,0:36:81.28:0,81,1685	1/1:1,6:7:18.06:273,18,0	1/1:0,6:6:18.06:273,18,0	1/1:5,12:17:29.69:446,30,0	0/0:14,0:14:33.11:0,33,699	0/0:13,0:12:33.11:0,33,699	0/0:24,0:24:66.23:0,66,1416	0/0:8,0:8:24.08:0,24,514
chr10	56684474	.	A	AAAAG	3756.19	PASS	AB=0.905;AC=24;AF=0.429;AN=56;BaseQRankSum=0.426;DP=518;FS=6.700;HRun=0;HaplotypeScore=107.0102;InbreedingCoeff=0.6282;MQ=56.30;MQ0=9;MQRankSum=-3.162;QD=14.07;ReadPosRankSum=0.809;VQSLOD=2.9453;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:42.01:0,42,685	1/1:10,2:13:24.86:320,25,0	0/1:18,0:4:12.45:12,0,40	0/0:13,0:3:4.01:0,4,49	0/0:23,0:23:55.84:0,56,690	1/1:0,0:9:18.06:235,18,0	1/1:3,0:13:21.01:240,21,0	1/1:10,2:30:46.61:553,47,0	0/0:10,0:10:17.48:0,17,129	0/1:18,0:18:4.73:5,0,200	0/0:20,0:20:38.18:0,38,271	0/1:5,0:12:20:134,0,20	0/0:17,0:17:41.47:0,41,510	0/0:21,0:21:41.23:0,41,726	0/0:25,0:25:4.61:0,5,306	1/1:5,0:24:6.26:432,6,0	1/1:7,0:24:0.08:332,0,0	1/1:14,0:28:16.04:629,16,0	0/0:14,0:13:17.33:0,17,214	0/0:18,0:18:34.06:0,34,208	0/0:4,0:4:5.99:0,6,51	1/1:6,1:12:21.92:247,22,0	1/1:3,0:19:29.98:344,30,0	1/1:5,0:13:21.07:264,21,0	0/0:13,0:13:32.21:0,32,253	0/0:22,0:22:55.82:0,56,456	0/1:28,0:27:7.87:8,0,283	0/0:18,0:16:34.72:0,35,246
chr10	56684480	.	G	GAAA	2705.35	PASS	AB=0.976;AC=16;AF=0.286;AN=56;BaseQRankSum=2.879;DP=477;FS=0.000;HRun=2;HaplotypeScore=93.3785;InbreedingCoeff=0.3109;MQ=65.21;MQ0=3;MQRankSum=-4.135;QD=13.39;ReadPosRankSum=6.592;VQSLOD=0.4107;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:60.15:0,60,905	0/1:13,0:13:32.58:87,0,33	0/1:18,0:9:3.21:3,0,175	0/0:10,0:4:4.65:0,5,60	0/0:22,0:22:60.11:0,60,873	1/1:8,0:8:18.05:207,18,0	0/1:14,0:14:26.42:192,0,26	0/1:24,0:21:88.56:89,0,93	0/0:9,0:9:18.02:0,18,221	0/0:22,0:22:57.09:0,57,645	0/0:17,0:17:42.11:0,42,547	0/1:13,1:15:39.35:163,0,39	0/0:15,0:15:45.12:0,45,651	0/0:18,0:18:54.17:0,54,809	0/0:25,0:25:49.60:0,50,585	1/1:22,1:23:39.13:527,39,0	1/1:21,0:20:30.05:390,30,0	0/1:24,2:26:40.82:543,0,41	0/0:14,0:14:42.01:0,42,483	0/0:17,0:17:36.51:0,37,392	0/0:4,0:4:9.02:0,9,119	0/1:10,0:10:7.53:166,0,8	0/1:20,0:20:33.10:257,0,33	1/1:10,0:10:21.06:262,21,0	0/0:14,0:14:30.92:0,31,378	0/0:22,0:22:63.09:0,63,833	0/0:23,0:22:61.51:0,62,721	0/0:16,0:16:42.09:0,42,520
chr10	56685380	.	CTTGTTTT	C	5514.16	PASS	AC=16;AF=0.296;AN=54;BaseQRankSum=9.323;DP=568;FS=34.491;HRun=0;HaplotypeScore=147.4347;InbreedingCoeff=0.9656;MQ=70.51;MQ0=0;MQRankSum=-13.018;QD=43.76;ReadPosRankSum=-0.694;VQSLOD=2.5361;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:78.25:0,78,2815	0/0:5,0:5:9.03:0,9,310	0/0:17,0:17:30.10:0,30,789	0/0:13,0:12:6.01:0,6,95	0/0:23,0:23:48.16:0,48,1812	1/1:7,13:20:39.13:919,39,0	1/1:2,7:9:18.06:424,18,0	0/0:29,0:29:54.18:0,54,1901	0/0:23,0:23:60.21:0,60,2191	0/0:28,0:28:75.26:0,75,2790	0/0:28,0:28:75.26:0,75,2680	1/1:2,13:15:36.12:848,36,0	0/0:18,0:18:36.12:0,36,1355	0/0:20,0:20:54.19:0,54,2024	0/0:29,0:29:72.25:0,72,2641	1/1:9,11:20:33.11:777,33,0	1/1:12,4:16:12.04:283,12,0	1/1:2,10:12:27.09:637,27,0	0/0:20,0:20:39.13:0,39,1387	0/0:29,0:29:75.26:0,75,2820	0/0:23,0:23:60.21:0,60,2111	1/1:4,13:17:39.13:919,39,0	1/1:4,13:17:30.57:708,31,0	./.	0/0:23,0:21:63.22:0,63,2350	0/0:33,0:33:78.27:0,78,2880	0/0:33,0:33:84.29:0,84,3117	0/0:15,0:15:36.12:0,36,1358
chr10	56687111	.	G	GC	487.98	PASS	AB=0.889;AC=33;AF=0.717;AN=46;BaseQRankSum=-1.753;DP=177;FS=12.398;HRun=11;HaplotypeScore=28.3128;InbreedingCoeff=0.2953;MQ=79.18;MQ0=1;MQRankSum=0.927;QD=3.81;ReadPosRankSum=-1.166;VQSLOD=-0.6125;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:20:27.89:0,28,192	./.	0/0:4,0:4:5.81:0,6,46	0/1:9,0:8:6.45:6,0,15	./.	1/1:4,0:5:2.99:23,3,0	1/1:5,3:8:3.48:31,3,0	0/0:5,0:9:8.13:0,8,24	0/1:4,0:4:0:0,0,0	1/1:5,0:5:0.47:1,0,0	1/1:1,0:1:2.96:19,3,0	1/1:3,11:14:2.99:24,3,0	1/1:1,0:1:0.47:1,0,0	0/0:10,0:10:8.85:0,9,64	./.	1/1:3,0:3:6:51,6,0	1/1:4,9:14:3.01:31,3,0	1/1:7,3:12:24.21:191,24,0	0/1:4,2:6:21.49:21,0,37	1/1:1,0:1:1.25:3,1,0	0/1:9,6:16:21.52:22,0,37	./.	./.	1/1:13,0:13:14.85:115,15,0	1/1:3,4:7:3.01:30,3,0	1/1:3,0:3:3.01:30,3,0	1/1:2,0:2:2.97:20,3,0	0/1:3,0:3:0:0,0,0
chr10	56688832	.	TGGGG	T	4539.52	PASS	AB=0.667;AC=45;AF=0.804;AN=56;BaseQRankSum=1.031;DP=385;FS=10.401;HRun=15;HaplotypeScore=79.1830;InbreedingCoeff=0.7042;MQ=71.96;MQ0=2;MQRankSum=-2.338;QD=15.49;ReadPosRankSum=6.094;VQSLOD=1.2495;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:12:2.84:0,3,24	1/1:3,0:6:1.11:3,1,0	0/0:36,0:15:26.47:0,26,346	0/0:25,0:15:25.43:0,25,427	1/1:4,0:4:0.47:1,0,0	1/1:4,13:17:33.11:449,33,0	1/1:8,12:20:23.95:322,24,0	1/1:7,9:16:18.89:261,19,0	1/1:4,0:11:14.92:118,15,0	1/1:4,0:9:11.86:94,12,0	1/1:2,0:6:8.93:70,9,0	1/1:4,9:13:24.04:327,24,0	0/0:8,0:8:6.02:0,6,86	0/0:10,0:10:15.05:0,15,254	1/1:5,0:20:26.66:211,27,0	1/1:4,15:19:36.54:454,37,0	1/1:9,17:26:32.95:449,33,0	1/1:6,13:19:30:375,30,0	1/1:4,0:13:23.55:174,24,0	0/1:4,0:8:5.29:65,0,5	1/1:7,0:15:11.92:93,12,0	1/1:4,3:7:9:123,9,0	1/1:3,6:9:15.01:179,15,0	1/1:5,15:20:27.02:368,27,0	1/1:4,0:8:8.94:71,9,0	1/1:8,0:11:8.88:71,9,0	1/1:2,0:15:32.92:260,33,0	1/1:1,0:1:1.25:3,1,0
chr10	56689005	.	TGG	T	4811.53	PASS	AB=1.000;AC=19;AF=0.365;AN=52;BaseQRankSum=-0.177;DP=509;FS=3.761;HRun=11;HaplotypeScore=66.7832;InbreedingCoeff=0.8462;MQ=74.76;MQ0=0;MQRankSum=-1.383;QD=24.30;ReadPosRankSum=7.496;VQSLOD=4.3637;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:39:60.14:0,60,863	./.	0/0:14,0:12:17.96:0,18,189	0/0:13,0:15:10.93:0,11,187	0/0:11,0:11:6.02:0,6,91	1/1:5,21:26:57.13:606,57,0	1/1:3,25:28:75.17:798,75,0	0/0:17,0:22:11.99:0,12,128	0/0:10,0:16:6:0,6,54	0/0:12,0:12:0:0,0,0	./.	1/1:3,16:19:47.85:491,48,0	0/0:16,0:17:26.54:0,27,330	0/0:19,0:19:24.06:0,24,326	0/0:15,0:23:15.03:0,15,166	1/1:5,21:26:60.13:638,60,0	1/1:1,23:24:69.17:734,69,0	1/1:3,16:20:47.83:491,48,0	0/0:14,0:20:14.46:0,14,258	0/0:11,0:11:5.96:0,6,45	0/0:23,0:36:5.97:0,6,50	1/1:1,12:13:33.08:351,33,0	1/1:4,11:15:24.03:255,24,0	1/1:3,14:17:42.10:447,42,0	0/1:9,0:10:0:0,0,0	0/0:17,0:17:9.02:0,9,100	0/0:20,0:19:9.90:0,10,95	0/0:7,0:7:15.02:0,15,163
chr10	56691597	.	C	CCT	393.08	PASS	AB=0.744;AC=15;AF=0.268;AN=56;BaseQRankSum=9.164;DP=603;FS=9.342;HRun=0;HaplotypeScore=118.6286;InbreedingCoeff=-0.2072;MQ=67.66;MQ0=8;MQRankSum=-9.109;QD=1.32;ReadPosRankSum=-5.483;VQSLOD=-0.5956;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:27:38.24:0,38,586	0/0:6,0:14:10.37:0,10,223	0/0:25,0:13:19.19:0,19,248	0/0:17,0:10:21.79:0,22,172	0/0:20,0:22:47.62:0,48,556	0/1:18,0:23:0.76:1,0,301	0/1:8,0:20:5.98:6,0,229	0/0:15,0:25:20.34:0,20,327	0/1:11,0:15:48.29:77,0,48	0/1:13,0:24:37.85:38,0,223	0/1:11,1:24:65.84:66,0,99	0/0:15,0:30:43.12:0,43,324	0/0:18,0:18:38.95:0,39,454	0/0:14,0:16:26.72:0,27,301	0/1:6,1:16:19.57:88,0,20	0/0:3,0:9:17.30:0,17,155	0/1:29,0:36:8.41:8,0,365	0/0:18,0:40:47.94:0,48,538	0/1:10,0:14:30.46:30,0,151	0/1:14,0:24:50.90:51,0,56	1/1:5,1:9:2.94:18,3,0	0/0:7,0:12:22.19:0,22,147	0/0:13,1:26:26.41:0,26,367	0/0:11,0:21:18.75:0,19,304	0/1:16,0:18:35.24:35,0,94	0/1:22,0:27:45.81:46,0,152	0/1:19,0:24:42.34:42,0,173	0/1:7,0:10:38.15:38,0,43
chr10	56691828	.	GA	G	4788	PASS	AB=0.933;AC=25;AF=0.446;AN=56;BaseQRankSum=12.738;DP=581;FS=1.065;HRun=10;HaplotypeScore=56.9175;InbreedingCoeff=0.8225;MQ=66.61;MQ0=0;MQRankSum=0.336;QD=19.23;ReadPosRankSum=0.978;VQSLOD=5.6402;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:48,1:49:99:0,103,1351	0/1:7,1:8:1.99:2,0,208	0/1:9,1:10:5.02:5,0,156	0/1:10,0:7:0.74:1,0,62	0/0:19,2:21:5.04:0,5,510	0/0:17,0:17:48.13:0,48,531	0/0:24,0:25:66.01:0,66,710	0/0:25,0:25:66.06:0,66,704	1/1:1,20:21:53.99:469,54,0	1/1:3,23:26:68.96:592,69,0	1/1:1,13:14:38.99:338,39,0	0/0:24,2:26:37.17:0,37,621	0/0:13,0:13:39.11:0,39,430	0/0:19,1:20:26.90:0,27,509	1/1:2,10:12:26.99:234,27,0	0/0:21,0:21:54.13:0,54,588	0/0:38,0:38:99:0,105,1151	0/0:23,1:24:40.12:0,40,670	1/1:6,20:26:59.98:521,60,0	1/1:3,12:15:35.99:313,36,0	1/1:2,19:21:53.98:469,54,0	0/0:14,0:14:36.09:0,36,390	0/0:11,1:12:4.03:0,4,273	0/0:27,0:27:63.16:0,63,689	1/1:1,14:15:38.99:339,39,0	1/1:3,26:29:44.79:614,45,0	1/1:0,32:32:74.96:651,75,0	1/1:0,9:10:29.03:240,29,0
chr10	56694782	.	G	GTTGTTTTTTT	7141.80	PASS	AB=1.000;AC=37;AF=0.661;AN=56;BaseQRankSum=0.456;DP=532;FS=8.830;HRun=0;HaplotypeScore=157.9240;InbreedingCoeff=0.3570;MQ=46.96;MQ0=8;MQRankSum=-9.158;QD=17.72;ReadPosRankSum=-0.218;VQSLOD=2.7593;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:41:30.86:0,31,1236	0/1:7,0:6:17.25:42,0,17	0/0:22,0:9:14.76:0,15,141	0/0:16,0:11:17.56:0,18,274	0/0:16,0:20:32.16:0,32,555	1/1:20,0:19:47.27:568,47,0	1/1:1,15:21:5.33:156,5,0	1/1:26,0:20:6.03:315,6,0	0/1:14,0:12:54.56:140,0,55	0/1:32,0:29:21.20:665,0,21	1/1:20,0:20:12.92:354,13,0	1/1:25,0:25:58.75:706,59,0	0/0:14,0:14:7.63:0,8,238	0/0:16,0:16:21.53:0,22,397	1/1:15,0:13:24.46:282,24,0	1/1:21,0:20:42:579,42,0	1/1:30,0:28:27.36:646,27,0	1/1:8,0:7:11.99:144,12,0	0/1:20,0:19:3.62:560,0,4	1/1:14,0:13:1.22:297,1,0	0/1:14,0:10:77.35:104,0,77	1/1:17,0:17:26.85:329,27,0	1/1:15,0:14:30.88:359,31,0	1/1:3,8:15:3.09:122,3,0	0/1:12,0:11:29.93:181,0,30	0/1:24,0:21:26.88:203,0,27	1/1:22,0:18:21.21:249,21,0	1/1:9,0:8:12.69:142,13,0
chr10	56694784	.	T	TG	529.10	PASS	AB=0.958;AC=11;AF=0.196;AN=56;BaseQRankSum=-3.110;DP=517;FS=18.521;HRun=0;HaplotypeScore=91.6576;InbreedingCoeff=0.0820;MQ=44.86;MQ0=8;MQRankSum=-1.687;QD=3.19;ReadPosRankSum=2.700;VQSLOD=1.9131;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:93.35:0,93,936	0/0:7,0:6:14.76:0,15,103	0/0:21,0:8:20.72:0,21,168	0/0:15,0:10:20.21:0,20,244	0/0:21,0:21:51.48:0,51,480	0/1:19,0:18:41.46:157,0,41	1/1:19,0:17:3.47:9,3,0	0/0:24,0:18:41.53:0,42,293	0/0:14,0:12:22.01:0,22,151	0/0:32,0:29:73.76:0,74,477	0/0:20,0:20:41.45:0,41,244	0/1:25,0:25:38.74:195,0,39	0/0:13,0:13:22.74:0,23,214	0/0:15,0:15:38.96:0,39,387	0/0:15,0:13:35.25:0,35,242	0/1:20,0:19:48.55:49,0,110	0/1:29,0:27:96.58:97,0,187	0/1:8,0:6:27.32:28,0,27	0/0:20,0:19:41.26:0,41,264	0/0:14,0:13:33.50:0,33,234	0/0:14,0:10:26.53:0,27,188	0/1:10,7:17:24.20:24,0,70	0/1:15,0:14:38.81:96,0,39	1/1:14,0:13:2.83:17,3,0	0/0:12,0:11:29.94:0,30,209	0/0:23,0:20:40.05:0,40,296	0/0:22,0:18:21.64:0,22,225	0/0:10,0:9:17.65:0,18,115
chr10	56695890	.	CTT	C	3749.17	PASS	AB=1.000;AC=39;AF=0.750;AN=52;BaseQRankSum=1.471;DP=320;FS=1.490;HRun=11;HaplotypeScore=54.8448;InbreedingCoeff=0.7905;MQ=70.02;MQ0=6;MQRankSum=-1.167;QD=15.43;ReadPosRankSum=3.529;VQSLOD=1.7071;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:16:35.09:0,35,479	1/1:0,3:3:6.02:64,6,0	0/0:22,0:10:15.04:0,15,184	0/0:17,0:8:18.01:0,18,200	0/0:14,0:14:33.11:0,33,493	1/1:5,16:21:48.08:511,48,0	1/1:0,6:6:15.04:158,15,0	1/1:11,21:31:63.11:664,63,0	1/1:7,0:6:8.46:50,8,0	1/1:9,0:9:14.20:74,14,0	0/1:7,0:7:5.31:45,0,5	1/1:1,6:7:15.03:160,15,0	0/0:3,0:3:6.02:0,6,92	0/0:3,0:3:6.02:0,6,92	1/1:6,0:6:8.69:47,9,0	1/1:3,6:9:12.02:128,12,0	1/1:7,24:32:47.45:655,47,0	1/1:3,14:18:33.02:351,33,0	1/1:20,0:16:37.39:198,37,0	1/1:7,0:7:15.06:87,15,0	1/1:13,0:13:18.73:104,19,0	./.	./.	1/1:3,6:9:12.02:128,12,0	1/1:7,0:7:14.44:77,14,0	1/1:7,0:7:14.49:81,14,0	1/1:9,0:9:14.48:80,14,0	1/1:14,0:14:14.66:87,15,0
chr10	56695900	.	TTA	T	2774.99	PASS	AB=1.000;AC=35;AF=0.648;AN=54;BaseQRankSum=5.337;DP=292;FS=0.000;HRun=0;HaplotypeScore=53.7614;InbreedingCoeff=0.4823;MQ=73.43;MQ0=5;MQRankSum=0.259;QD=12.61;ReadPosRankSum=5.184;VQSLOD=3.0500;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:44.82:0,45,647	1/1:3,0:3:4.31:14,4,0	0/0:21,0:9:10.30:0,10,189	0/0:15,0:8:17.92:0,18,221	0/0:13,0:13:39.09:0,39,631	1/1:17,0:17:11.09:81,11,0	0/1:7,0:7:11.61:18,0,12	0/1:31,0:31:43.14:43,0,194	1/1:2,7:8:8.82:104,9,0	1/1:0,8:8:21.01:253,21,0	1/1:1,7:8:12.03:167,12,0	1/1:6,0:6:9.32:31,9,0	0/0:2,0:2:6.02:0,6,110	0/0:2,0:2:6.02:0,6,110	1/1:0,4:4:9.03:125,9,0	0/1:7,0:7:7.28:7,0,16	0/1:31,0:31:40.54:89,0,41	0/1:18,0:18:16.12:53,0,16	1/1:2,16:17:48.12:618,48,0	1/1:0,6:6:18.01:228,18,0	1/1:0,9:9:18.06:251,18,0	./.	0/0:2,0:2:5.94:0,6,41	1/1:7,0:7:7.67:22,8,0	1/1:0,9:9:15.05:209,15,0	1/1:0,5:5:15.05:209,15,0	1/1:0,10:10:18.02:229,18,0	1/1:0,7:7:15.05:209,15,0
chr10	56697795	.	A	AGAAG	20961.92	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-11.420;DP=727;FS=15.208;HRun=0;HaplotypeScore=93.1749;InbreedingCoeff=0.9877;MQ=63.28;MQ0=2;MQRankSum=0.607;QD=37.77;ReadPosRankSum=4.022;VQSLOD=4.1970;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,102,1560	1/1:1,6:8:15.05:372,15,0	0/0:26,0:15:29.93:0,30,312	0/0:31,0:24:28.35:0,28,364	0/0:27,0:27:69.14:0,69,1000	1/1:4,23:28:36.12:881,36,0	1/1:5,24:31:42.14:1012,42,0	1/1:33,0:33:71.37:983,71,0	1/1:3,18:21:24.08:599,24,0	1/1:7,21:29:66.15:1305,66,0	1/1:3,15:18:41.93:818,42,0	1/1:4,14:19:21.07:524,21,0	0/0:21,0:21:57.17:0,57,909	0/0:24,0:24:63.14:0,63,934	1/1:0,29:30:39.13:975,39,0	1/1:3,16:19:39.13:974,39,0	1/1:3,12:17:12.03:300,12,0	1/1:3,23:27:42.13:1000,42,0	1/1:6,18:25:57.11:1123,57,0	1/1:1,27:28:77.99:1524,78,0	1/1:7,34:43:75.26:1873,75,0	1/1:4,20:24:48.01:952,48,0	1/1:5,12:17:23.97:536,24,0	1/1:5,21:26:42.14:1048,42,0	1/1:5,19:26:33.11:824,33,0	1/1:9,26:37:81.01:1693,81,0	1/1:1,25:27:45.15:1121,45,0	1/1:2,18:21:21.07:524,21,0
chr10	56699287	.	T	TACACACACACAC	11392.70	PASS	AB=0.613;AC=40;AF=0.714;AN=56;BaseQRankSum=3.067;DP=719;FS=8.276;HRun=0;HaplotypeScore=239.5775;InbreedingCoeff=0.6727;MQ=60.67;MQ0=12;MQRankSum=-8.404;QD=24.55;ReadPosRankSum=-3.234;VQSLOD=2.0809;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:90.26:0,90,3043	1/1:4,0:8:5.94:203,6,0	0/0:43,0:28:53.22:0,53,1419	0/0:45,0:31:64.20:0,64,1820	0/0:15,0:15:24.26:0,24,604	0/1:6,3:15:0:0,0,0	1/1:22,0:22:21.82:542,22,0	1/1:26,0:23:51.17:1471,51,0	1/1:10,0:35:5.41:229,5,0	1/1:9,11:27:65.34:2050,65,0	1/1:22,0:22:0.47:2,0,0	1/1:15,5:26:9.03:314,9,0	0/0:30,0:29:1.83:0,2,1465	0/0:29,0:29:52.82:0,53,1566	0/0:6,0:39:0.42:0,0,1	1/1:25,0:25:14.93:422,15,0	1/1:8,0:8:6.02:229,6,0	1/1:10,0:10:17.09:597,17,0	1/1:23,0:22:42.10:1233,42,0	1/1:9,13:29:3:29,3,0	1/1:18,0:17:11.99:143,12,0	1/1:12,0:19:0.47:1,0,0	0/1:6,0:18:0:0,0,0	1/1:9,0:17:0.47:1,0,0	1/1:22,0:20:5.55:175,6,0	1/1:10,20:45:99:3383,99,0	1/1:9,12:30:6.34:37,6,0	1/1:4,0:14:9.03:331,9,0
chr10	56699297	.	CAG	C	736.94	PASS	AB=0.970;AC=31;AF=0.596;AN=52;BaseQRankSum=1.414;DP=682;FS=25.314;HRun=0;HaplotypeScore=143.2481;InbreedingCoeff=0.2061;MQ=52.66;MQ0=18;MQRankSum=2.210;QD=1.54;ReadPosRankSum=-1.404;VQSLOD=0.7480;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:52,0:53:90.88:91,0,257	0/0:10,0:10:2.99:0,3,23	./.	./.	1/1:12,2:14:0.47:1,0,0	1/1:16,0:15:3.36:21,3,0	1/1:23,0:23:15.10:116,15,0	0/0:28,0:25:17.56:0,18,104	0/0:32,0:31:4.26:0,4,14	0/1:25,0:23:10.81:39,0,11	1/1:22,0:22:8.95:69,9,0	0/0:25,0:25:11.91:0,12,89	0/1:32,1:32:47.25:47,0,337	0/1:21,5:26:14.38:14,0,152	1/1:36,1:36:7.31:42,7,0	1/1:31,0:30:7.06:99,7,0	0/0:9,0:9:8.91:0,9,65	0/0:11,0:11:0:0,0,0	1/1:22,0:21:8.31:106,8,0	1/1:21,0:21:0.47:1,0,0	1/1:17,0:15:1.25:3,1,0	0/1:19,0:19:3.51:15,0,4	0/0:17,0:16:2.79:0,3,25	1/1:15,0:15:5.84:43,6,0	1/1:26,0:24:9.16:67,9,0	0/1:38,0:37:11.66:52,0,12	1/1:25,0:24:2.87:21,3,0	0/1:14,0:13:0.83:36,0,1
chr10	56702585	.	G	GTCTCTCTCTCTCTCTC	5624.12	PASS	AB=0.690;AC=17;AF=0.315;AN=54;BaseQRankSum=-6.027;DP=597;FS=2.336;HRun=0;HaplotypeScore=231.3211;InbreedingCoeff=0.7668;MQ=72.37;MQ0=6;MQRankSum=-6.678;QD=36.05;ReadPosRankSum=-1.347;VQSLOD=3.7942;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:30:63.20:0,63,2297	0/0:1,0:6:18.06:0,18,434	0/0:44,0:24:9.89:0,10,451	0/0:37,0:22:9.58:0,10,265	0/0:34,0:34:46.95:0,47,2435	1/1:6,8:22:24.08:1766,24,0	./.	0/1:11,0:20:26.58:27,0,237	0/0:15,0:15:39.12:0,39,1284	0/0:23,0:22:48.07:0,48,1201	0/0:19,0:19:45.11:0,45,1340	1/1:6,8:22:21.07:1597,21,0	0/0:18,0:18:45.12:0,45,1659	0/0:21,0:21:48.16:0,48,1974	0/0:18,0:18:21.07:0,21,735	1/1:8,0:19:15.05:639,15,0	1/1:7,4:16:3.01:208,3,0	1/1:6,1:9:8.96:475,9,0	0/0:17,0:17:21.07:0,21,637	0/0:24,0:24:51.10:0,51,1430	0/0:14,0:13:15.05:0,15,518	1/1:8,2:11:6.02:456,6,0	1/1:14,1:24:2.84:228,3,0	1/1:2,4:10:3.01:228,3,0	0/0:18,0:18:39.08:0,39,1073	0/0:30,0:30:71.68:0,72,2288	0/0:37,0:37:81.58:0,82,2512	0/0:23,0:23:36.04:0,36,1120
chr10	56702605	.	C	CT	5220.36	PASS	AB=1.000;AC=31;AF=0.554;AN=56;BaseQRankSum=-4.068;DP=556;FS=6.572;HRun=8;HaplotypeScore=96.0836;InbreedingCoeff=0.4133;MQ=61.52;MQ0=9;MQRankSum=-4.259;QD=13.77;ReadPosRankSum=4.990;VQSLOD=4.3869;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:77.99:0,78,712	0/1:9,0:9:5.49:5,0,65	0/1:25,0:13:15.09:15,0,87	0/0:27,0:16:20.94:0,21,198	0/0:35,0:35:83.67:0,84,714	1/1:19,0:19:15.20:45,15,0	0/0:10,0:9:0.10:0,0,23	0/0:17,0:17:3.85:0,4,142	1/1:1,14:15:39.12:449,39,0	1/1:9,13:20:33.05:363,33,0	1/1:2,18:19:42.08:470,42,0	0/1:23,0:23:18.85:19,0,56	0/0:17,0:17:48.03:0,48,438	0/0:20,0:20:54.02:0,54,490	1/1:2,12:14:24.07:276,24,0	0/1:18,0:18:6.70:30,0,7	0/1:24,0:21:0.65:1,0,162	0/0:8,0:7:0.19:0,0,23	1/1:7,9:15:33.09:373,33,0	1/1:3,20:23:51.15:589,51,0	1/1:0,11:9:18.05:206,18,0	0/1:12,0:11:30:30,0,59	0/1:22,0:22:27.06:27,0,84	0/0:8,0:7:0.07:0,0,23	1/1:2,17:19:33.10:381,33,0	1/1:5,25:30:73.82:828,74,0	1/1:9,30:38:66.19:759,66,0	1/1:3,14:17:8.66:353,9,0
chr10	56703101	.	G	GAC	20889.60	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-15.460;DP=589;FS=0.354;HRun=0;HaplotypeScore=60.7904;InbreedingCoeff=0.9997;MQ=78.83;MQ0=3;MQRankSum=-4.327;QD=48.02;ReadPosRankSum=4.243;VQSLOD=6.1845;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:69.20:0,69,974	0/0:9,0:9:27.08:0,27,378	0/0:27,0:26:70.78:0,71,1022	0/0:18,0:18:45.12:0,45,639	0/0:25,0:25:75.21:0,75,1062	1/1:1,24:26:69.24:1292,69,0	1/1:1,19:20:51.17:943,51,0	0/0:16,0:16:48.14:0,48,657	1/1:1,19:20:54.19:1011,54,0	1/1:0,17:18:54.14:940,54,0	1/1:0,18:19:51.17:951,51,0	1/1:0,22:22:57.20:1067,57,0	0/0:18,0:18:54.18:0,54,795	0/0:17,0:17:51.17:0,51,751	1/1:2,22:23:60.21:1123,60,0	1/1:1,23:24:63.22:1180,63,0	1/1:0,26:26:60.21:1123,60,0	1/1:2,22:25:57.20:1067,57,0	1/1:1,21:22:66.19:1172,66,0	1/1:1,21:22:63.22:1180,63,0	1/1:0,19:19:48.16:899,48,0	1/1:0,24:24:51.17:950,51,0	1/1:1,25:25:60.21:1123,60,0	1/1:0,13:13:33.11:618,33,0	1/1:1,20:21:60.15:1083,60,0	1/1:2,23:25:72.25:1315,72,0	1/1:1,24:25:66.23:1235,66,0	1/1:1,13:13:33.11:618,33,0
chr10	56705327	.	C	CA	4184.17	PASS	AB=0.967;AC=42;AF=0.750;AN=56;BaseQRankSum=7.389;DP=651;FS=2.147;HRun=14;HaplotypeScore=95.3445;InbreedingCoeff=0.6620;MQ=61.23;MQ0=17;MQRankSum=0.545;QD=8.29;ReadPosRankSum=2.844;VQSLOD=3.2244;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:39,3:43:23.14:23,0,353	0/0:7,0:7:14.77:0,15,96	0/0:32,0:5:2.86:0,3,19	0/0:37,0:6:2.10:0,2,7	0/0:27,0:27:7.38:0,7,256	1/1:14,0:13:16.23:69,16,0	1/1:21,0:20:40.12:164,40,0	0/0:25,0:25:1.68:0,2,217	1/1:30,0:30:63.28:350,63,0	1/1:27,0:27:40.14:228,40,0	1/1:14,0:14:31.21:151,31,0	1/1:16,0:16:23.70:99,24,0	0/1:15,0:17:19.23:19,0,103	0/0:15,0:16:25.22:0,25,141	1/1:32,1:33:41.29:351,41,0	1/1:15,0:15:32.33:135,32,0	1/1:34,1:34:67.95:291,68,0	1/1:21,0:21:43.44:186,43,0	1/1:26,0:24:49.96:243,50,0	1/1:16,0:15:25.92:145,26,0	1/1:14,0:14:34.11:167,34,0	1/1:17,0:17:27.66:119,28,0	1/1:24,0:24:37.69:159,38,0	1/1:20,0:20:32.76:143,33,0	1/1:24,0:24:59.07:283,59,0	1/1:29,0:29:68.71:304,69,0	1/1:24,1:25:49.13:282,49,0	1/1:24,0:24:54.12:271,54,0
chr10	56705329	.	A	AAAC	4744.88	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=6.087;DP=646;FS=8.135;HRun=0;HaplotypeScore=113.3720;InbreedingCoeff=0.9680;MQ=61.33;MQ0=17;MQRankSum=0.976;QD=10.76;ReadPosRankSum=5.080;VQSLOD=3.8638;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:94.65:0,95,1362	0/0:7,0:7:21.05:0,21,308	0/0:32,0:5:14.78:0,15,130	0/0:37,0:6:3.93:0,4,47	0/0:28,0:28:59.53:0,60,946	1/1:14,0:13:17.18:130,17,0	1/1:20,1:20:44.93:401,45,0	0/0:26,0:25:51.26:0,51,728	1/1:32,0:32:38.44:132,38,0	1/1:27,0:27:50.27:251,50,0	1/1:14,0:14:30.19:110,30,0	1/1:14,0:14:26.56:221,27,0	0/0:16,0:16:39.08:0,39,522	0/0:15,0:15:40.61:0,41,468	1/1:34,0:34:30.14:164,30,0	1/1:14,0:14:35.17:276,35,0	1/1:34,1:34:62.72:583,63,0	1/1:21,1:22:39.88:376,40,0	1/1:26,0:24:52.36:257,52,0	1/1:16,0:15:25.31:103,25,0	1/1:13,0:13:26.64:87,27,0	1/1:17,0:17:33.36:288,33,0	1/1:21,2:23:44.63:422,45,0	1/1:21,0:21:33.42:239,33,0	1/1:23,0:23:46.78:155,47,0	1/1:28,0:28:65.51:277,66,0	1/1:23,0:23:24.36:123,24,0	1/1:24,0:24:42.75:152,43,0
chr10	56705330	.	A	AAC	8194.62	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-1.864;DP=644;FS=7.288;HRun=0;HaplotypeScore=88.5840;InbreedingCoeff=0.9718;MQ=61.46;MQ0=17;MQRankSum=0.983;QD=18.62;ReadPosRankSum=5.404;VQSLOD=4.4686;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,116,1358	0/0:7,0:7:21.05:0,21,282	0/0:33,0:5:14.79:0,15,135	0/0:38,0:6:4.58:0,5,62	0/0:29,0:29:78.39:0,78,943	1/1:3,11:13:17.83:252,18,0	1/1:4,18:21:45.12:695,45,0	0/0:26,0:25:51.26:0,51,683	1/1:32,0:32:54.94:253,55,0	1/1:26,0:26:67.05:368,67,0	1/1:13,0:13:36.55:175,37,0	1/1:0,13:15:26.68:430,27,0	0/0:16,0:16:40:0,40,492	0/0:14,0:14:42.06:0,42,495	1/1:34,0:34:58.51:314,59,0	1/1:1,13:14:35.91:537,36,0	1/1:7,28:34:61.07:1071,61,0	1/1:4,18:23:47.58:679,48,0	1/1:23,1:22:53.01:342,53,0	1/1:15,0:14:30.73:154,31,0	1/1:13,0:13:33.57:157,34,0	1/1:1,15:17:41.59:507,42,0	1/1:2,20:23:45:640,45,0	1/1:3,17:21:35.28:464,35,0	1/1:24,0:24:58.46:274,58,0	1/1:28,0:28:78.69:407,79,0	1/1:23,0:23:38.39:200,38,0	1/1:23,1:24:52.92:278,53,0
chr10	56705331	.	A	AC	9688.16	PASS	AB=1.000;AC=39;AF=0.696;AN=56;BaseQRankSum=-5.021;DP=647;FS=5.701;HRun=0;HaplotypeScore=73.2518;InbreedingCoeff=0.8993;MQ=61.68;MQ0=17;MQRankSum=-1.889;QD=21.97;ReadPosRankSum=6.678;VQSLOD=6.2097;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,113,1274	0/0:7,0:7:21.05:0,21,262	0/0:33,0:5:14.79:0,15,133	0/0:39,0:7:4.60:0,5,67	0/0:30,0:30:78.25:0,78,896	1/1:12,1:12:17.49:116,17,0	1/1:20,1:20:43.24:235,43,0	0/0:24,0:23:54.24:0,54,657	1/1:2,30:32:64.41:770,64,0	1/1:1,25:26:75.35:849,75,0	1/1:1,13:14:38.85:446,39,0	1/1:15,0:15:25.40:141,25,0	0/0:17,0:17:34.84:0,35,433	0/0:15,0:15:42.07:0,42,465	1/1:3,31:34:76.45:949,76,0	1/1:13,1:14:34.88:210,35,0	1/1:33,2:34:56.70:402,57,0	1/1:21,1:22:38.26:266,38,0	1/1:3,22:23:67.24:722,67,0	1/1:3,14:16:32.94:377,33,0	1/1:0,13:13:36.12:453,36,0	0/1:17,0:17:7.72:159,0,8	1/1:23,0:23:43.10:227,43,0	1/1:18,3:21:35.04:252,35,0	1/1:0,24:24:63.20:792,63,0	1/1:4,24:28:84.10:1007,84,0	1/1:1,22:23:53.70:621,54,0	1/1:1,23:24:57.08:694,57,0
chr10	56705855	.	G	GT	2125.06	PASS	AB=0.849;AC=38;AF=0.679;AN=56;BaseQRankSum=1.343;DP=418;FS=0.000;HRun=15;HaplotypeScore=81.1845;InbreedingCoeff=0.2115;MQ=65.14;MQ0=8;MQRankSum=-3.685;QD=6.31;ReadPosRankSum=-2.445;VQSLOD=2.0891;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:29,2:31:32.74:33,0,241	0/0:5,0:5:8.71:0,9,54	0/0:27,0:11:2.67:0,3,16	0/1:22,0:8:1.30:1,0,15	0/1:15,1:18:15.76:16,0,44	1/1:10,4:16:5.55:120,6,0	1/1:9,2:11:9.78:68,10,0	0/0:23,1:26:10.75:0,11,175	1/1:3,2:6:5.99:49,6,0	1/1:10,10:19:14.91:228,15,0	0/1:15,4:20:11.36:167,0,11	0/1:6,3:8:22.12:32,0,22	0/0:13,0:13:5.67:0,6,49	0/0:8,0:8:4.82:0,5,24	1/1:8,4:12:17.81:129,18,0	1/1:8,6:15:5.74:137,6,0	1/1:9,0:9:5.81:34,6,0	1/1:8,1:9:11.80:80,12,0	0/1:12,4:15:12.94:117,0,13	1/1:8,7:14:17.98:151,18,0	0/1:7,4:11:6.03:63,0,6	1/1:0,1:1:3:25,3,0	1/1:8,2:10:5.99:51,6,0	0/1:7,2:9:14.12:14,0,31	1/1:14,2:16:11.82:84,12,0	1/1:23,8:33:35.46:298,35,0	1/1:10,5:15:26.59:193,27,0	1/1:2,9:10:23.97:201,24,0
chr10	56705975	.	T	TTATATAG	29719.94	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-3.576;DP=396;FS=23.584;HRun=0;HaplotypeScore=82.4927;InbreedingCoeff=0.9505;MQ=53.58;MQ0=0;MQRankSum=-12.020;QD=97.76;ReadPosRankSum=-2.029;VQSLOD=3.2923;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:96.03:0,96,2514	1/1:2,3:5:15.05:603,15,0	0/0:9,0:8:18.53:0,19,471	0/0:11,0:11:24.08:0,24,589	0/0:13,0:13:39.11:0,39,940	1/1:6,15:22:57.20:2294,57,0	1/1:4,6:12:24.08:971,24,0	1/1:17,8:29:81.20:2658,81,0	1/1:1,4:6:15.05:581,15,0	1/1:6,14:20:54.18:2129,54,0	1/1:2,7:10:27.09:1066,27,0	1/1:7,5:12:33.11:1307,33,0	0/0:8,0:8:24.08:0,24,646	0/0:16,0:16:45.15:0,45,1213	1/1:6,14:21:54.19:2183,54,0	1/1:2,9:13:30.10:1214,30,0	1/1:2,4:7:18.06:722,18,0	1/1:3,3:6:15.05:596,15,0	1/1:1,5:8:21.05:659,21,0	1/1:7,11:20:39.12:1550,39,0	1/1:1,1:5:6.02:232,6,0	1/1:3,5:8:21.07:836,21,0	1/1:2,9:11:30.10:1201,30,0	1/1:3,7:11:18.09:845,18,0	1/1:8,21:29:87.30:3480,87,0	1/1:7,14:24:63.22:2355,63,0	1/1:7,11:19:48.16:1874,48,0	1/1:1,2:4:9.03:364,9,0
chr10	56706863	.	TCTCTCTCC	T	843.87	PASS	AB=0.972;AC=25;AF=0.481;AN=52;BaseQRankSum=5.242;DP=434;FS=2.182;HRun=0;HaplotypeScore=126.3918;InbreedingCoeff=0.1858;MQ=35.05;MQ0=70;MQRankSum=-3.013;QD=3.15;ReadPosRankSum=-2.791;VQSLOD=1.8493;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:18:24.38:0,24,213	0/1:4,0:4:2.04:2,0,61	./.	./.	0/0:12,0:12:19.80:0,20,153	0/0:13,0:13:1.54:0,2,3	1/1:16,0:12:5.02:35,5,0	0/0:14,0:11:32.32:0,32,241	0/1:18,0:13:21.36:21,0,24	0/1:11,0:8:33.69:34,0,34	0/1:18,0:11:0.54:25,0,1	1/1:18,0:17:8.81:49,9,0	0/0:16,0:15:9.78:0,10,377	0/0:17,0:15:23.84:0,24,356	0/1:19,1:11:4.95:6,0,5	1/1:12,0:11:7.56:40,8,0	1/1:11,0:9:14.80:96,15,0	1/1:12,0:9:16.10:106,16,0	0/1:14,5:15:27.75:202,0,28	1/1:17,0:15:15.55:106,16,0	0/1:16,0:11:2.52:3,0,78	0/0:18,0:18:1.89:0,2,2	1/1:17,0:15:3.76:36,4,0	0/0:25,0:18:5.71:0,6,126	0/1:20,0:14:0.30:23,0,0	0/1:18,1:17:28.22:155,0,28	0/1:13,0:10:9.69:43,0,10	0/1:7,0:5:12.29:22,0,12
chr10	56706865	.	T	TA	71.37	PASS	AB=0.957;AC=7;AF=0.135;AN=52;BaseQRankSum=2.184;DP=437;FS=23.939;HRun=0;HaplotypeScore=109.5773;InbreedingCoeff=0.2851;MQ=34.89;MQ0=71;MQRankSum=2.331;QD=0.81;ReadPosRankSum=-2.779;VQSLOD=0.1467;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:18:27.43:0,27,316	0/0:4,0:4:12.04:0,12,165	./.	./.	0/0:12,0:12:27.06:0,27,339	0/1:14,0:14:0.06:0,0,0	0/1:15,0:12:2.68:3,0,51	0/0:15,0:12:36:0,36,454	0/0:16,0:13:9.03:0,9,124	0/0:13,0:10:21.95:0,22,274	0/0:20,0:12:9.01:0,9,122	0/0:17,0:16:6.42:0,6,69	0/0:16,0:15:27.30:0,27,372	0/0:17,0:15:30.52:0,31,388	0/0:19,0:11:9.03:0,9,108	0/1:9,2:10:70.48:75,0,70	0/1:10,0:8:4.41:4,0,112	0/0:12,0:9:14.03:0,14,228	0/0:18,0:15:44.51:0,45,518	0/0:18,0:16:12.43:0,12,163	0/0:15,0:10:6.02:0,6,83	0/1:19,0:19:0:0,0,0	1/1:16,2:16:5.34:87,5,0	0/0:21,1:15:8.87:0,9,120	0/0:19,0:13:9.03:0,9,113	0/0:19,0:17:50.74:0,51,597	0/0:14,0:11:30.03:0,30,356	0/0:7,0:5:9.50:0,9,113
chr10	56706867	.	TCTCC	T	1520.39	PASS	AB=0.987;AC=29;AF=0.558;AN=52;BaseQRankSum=5.195;DP=437;FS=7.546;HRun=0;HaplotypeScore=111.5825;InbreedingCoeff=0.1606;MQ=35.21;MQ0=70;MQRankSum=-1.039;QD=5.28;ReadPosRankSum=-1.209;VQSLOD=1.3949;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:21,0:18:67.77:68,0,95	0/1:4,0:4:2.04:2,0,61	./.	./.	0/1:12,0:12:65.80:66,0,81	0/0:14,0:14:0.29:0,0,1	1/1:15,0:11:5.73:37,6,0	0/0:15,0:12:35.19:0,35,260	0/1:19,0:14:21.37:21,0,24	0/1:12,1:10:22.88:116,0,23	1/1:22,0:14:3.69:39,4,0	1/1:17,0:16:8.81:54,9,0	0/0:15,0:14:9.46:0,9,151	0/0:16,0:14:21.41:0,21,123	1/1:20,0:11:8.47:123,8,0	1/1:11,0:10:5.66:37,6,0	1/1:9,0:7:14.80:96,15,0	1/1:12,0:9:16.67:108,17,0	0/1:19,0:15:3.37:155,0,3	1/1:19,0:17:15.73:107,16,0	0/1:16,0:11:9.42:9,0,44	0/0:19,0:19:0:0,0,1	0/0:18,0:17:0.89:0,1,2	0/0:22,0:15:4.26:0,4,66	1/1:14,6:14:2.29:32,2,0	0/1:18,1:18:2.02:381,0,2	1/1:14,0:11:25.45:200,25,0	0/1:6,0:4:8.83:23,0,9
chr10	56706884	.	CTACACA	C	959.28	PASS	AB=0.963;AC=21;AF=0.404;AN=52;BaseQRankSum=7.242;DP=477;FS=34.075;HRun=0;HaplotypeScore=137.3404;InbreedingCoeff=-0.0203;MQ=37.45;MQ0=66;MQRankSum=1.280;QD=3.38;ReadPosRankSum=0.888;VQSLOD=1.1402;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:19:15.72:0,16,709	0/1:4,0:4:23.46:43,0,23	./.	./.	0/0:13,0:13:24.63:0,25,614	0/0:19,0:19:0:0,0,1	0/1:17,0:13:41.20:41,0,70	0/0:17,0:13:19.35:0,19,272	0/1:20,0:16:2.42:2,0,8	0/1:18,0:15:48.23:48,0,126	0/1:27,0:19:4.40:43,0,4	1/1:15,0:16:4.89:66,5,0	0/0:17,0:16:22.45:0,22,563	0/0:18,0:16:29.96:0,30,693	0/1:16,4:14:0.52:64,0,1	1/1:14,0:13:5.23:50,5,0	0/1:10,0:8:5.59:57,0,6	0/1:11,0:11:46.89:47,0,62	0/1:22,0:18:72.24:72,0,251	1/1:16,4:18:17.48:148,17,0	0/1:15,0:10:3.20:48,0,3	0/0:17,0:19:0:0,0,1	0/0:17,0:16:0.47:0,0,1	0/0:20,0:16:2.04:0,2,17	1/1:24,0:18:20.09:143,20,0	0/1:18,1:17:45.16:88,0,45	0/1:19,0:16:25.29:114,0,25	0/1:4,0:4:14.78:33,0,15
chr10	56706885	.	TACACACACAC	T	815.60	PASS	AB=0.841;AC=12;AF=0.250;AN=48;BaseQRankSum=1.353;DP=470;FS=7.619;HRun=0;HaplotypeScore=152.0268;InbreedingCoeff=0.5220;MQ=37.52;MQ0=67;MQRankSum=-4.814;QD=6.09;ReadPosRankSum=0.999;VQSLOD=2.2843;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:19:23.81:0,24,1091	0/0:1,0:4:11.59:0,12,130	./.	./.	0/0:12,0:13:21.07:0,21,910	0/1:14,5:19:0.13:0,0,0	0/1:11,5:13:99:150,0,137	0/0:16,0:13:12:0,12,200	0/0:11,0:16:6.02:0,6,102	0/0:11,0:13:24.08:0,24,493	0/0:14,0:18:15.03:0,15,265	1/1:15,1:16:6.02:163,6,0	0/0:16,0:15:21.07:0,21,856	0/0:17,0:16:24.55:0,25,1085	0/0:15,0:13:9.02:0,9,131	1/1:6,8:13:5.66:179,6,0	1/1:7,4:8:7.66:266,8,0	1/1:8,4:11:6.02:164,6,0	0/1:22,0:18:28.77:29,0,378	0/0:11,0:17:17.14:0,17,315	0/0:13,0:10:11.92:0,12,206	./.	./.	0/1:18,2:16:0.18:0,0,0	0/0:16,0:17:24.08:0,24,416	0/0:9,0:16:24.08:0,24,441	0/0:10,0:16:19.30:0,19,290	0/0:2,0:3:2.50:0,2,9
chr10	56706889	.	C	CT	496.39	PASS	AB=0.892;AC=14;AF=0.269;AN=52;BaseQRankSum=2.781;DP=475;FS=8.689;HRun=0;HaplotypeScore=120.5604;InbreedingCoeff=0.1969;MQ=37.58;MQ0=69;MQRankSum=3.865;QD=2.09;ReadPosRankSum=0.166;VQSLOD=2.0452;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:21:38.62:0,39,496	0/0:4,0:4:11.57:0,12,86	./.	./.	0/0:13,0:13:29.93:0,30,395	0/1:19,0:19:0.03:0,0,1	0/0:17,0:13:8.51:0,9,67	0/0:16,0:14:16.92:0,17,428	0/1:17,1:15:8.67:14,0,9	0/1:16,2:14:60.76:61,0,180	0/1:19,8:19:23.85:80,0,24	0/0:15,0:15:4.74:0,5,25	0/0:15,0:14:33.08:0,33,437	0/0:17,0:15:30.02:0,30,380	1/1:16,2:13:11.90:92,12,0	0/0:14,0:13:5.55:0,6,29	0/0:11,0:8:18.12:0,18,159	0/0:12,0:11:17.71:0,18,184	0/0:21,1:17:36.27:0,36,499	1/1:14,5:17:17.32:107,17,0	0/1:14,3:11:29.79:49,0,30	0/1:19,0:19:0:1,0,0	0/1:16,0:15:0:0,0,0	0/0:21,0:16:5.58:0,6,69	0/1:18,8:19:2.55:96,0,3	0/1:14,4:16:99:106,0,237	0/1:16,3:17:36.41:36,0,135	0/0:3,0:3:5.88:0,6,51
chr10	56709056	.	C	CT	9540.23	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-17.411;DP=727;FS=8.483;HRun=2;HaplotypeScore=71.0579;InbreedingCoeff=0.9905;MQ=80.19;MQ0=0;MQRankSum=-1.517;QD=40.08;ReadPosRankSum=1.714;VQSLOD=5.0135;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,150,1857	0/0:12,0:12:33.10:0,33,409	0/0:22,0:22:47.62:0,48,540	0/0:13,0:13:25.46:0,25,241	0/0:22,0:22:66.21:0,66,818	1/1:0,18:18:45.15:648,45,0	1/1:3,34:37:99:1426,99,0	0/0:24,0:24:72.22:0,72,882	0/0:24,0:24:66.19:0,66,805	0/0:39,0:39:99:0,114,1379	0/0:10,0:10:27.08:0,27,335	1/1:0,27:27:81.27:1165,81,0	0/0:34,0:34:99:0,99,1214	0/0:38,0:38:99:0,111,1339	0/0:33,0:33:99:0,99,1214	1/1:0,27:27:81.27:1167,81,0	1/1:1,29:30:84.28:1210,84,0	1/1:0,30:29:90.26:1268,90,0	0/0:20,0:20:57.17:0,57,695	0/0:20,0:20:54.17:0,54,669	0/0:67,0:67:99:0,196,2404	1/1:0,21:21:54.18:778,54,0	1/1:1,12:13:33.11:475,33,0	1/1:2,33:35:99:1404,99,0	0/0:15,0:15:45.14:0,45,558	0/0:20,0:20:60.19:0,60,738	0/0:23,0:22:60.17:0,60,730	0/0:3,0:3:9.03:0,9,112
chr10	56709644	.	G	GC	1952	PASS	AB=0.758;AC=31;AF=0.574;AN=54;BaseQRankSum=-5.229;DP=415;FS=2.689;HRun=11;HaplotypeScore=62.5219;InbreedingCoeff=0.2535;MQ=90.61;MQ0=3;MQRankSum=-0.887;QD=6.92;ReadPosRankSum=0.157;VQSLOD=1.8830;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:36.74:0,37,316	0/0:1,0:4:4.07:0,4,12	0/1:43,0:31:4.45:4,0,161	0/0:34,0:22:10.99:0,11,66	0/0:9,0:11:14.55:0,15,103	0/1:10,9:19:29.82:76,0,30	1/1:5,13:19:25.10:363,25,0	0/0:12,0:21:20.02:0,20,72	1/1:5,8:13:12.02:121,12,0	1/1:4,2:6:3:30,3,0	./.	0/1:5,9:14:6.02:93,0,6	0/0:16,0:17:2.27:0,2,191	0/0:17,0:17:23.85:0,24,186	0/1:6,10:17:2.50:142,0,2	1/1:7,8:16:14.86:136,15,0	1/1:6,10:16:0.82:190,1,0	1/1:3,11:16:18.81:168,19,0	0/1:13,4:17:11.24:99,0,11	0/1:6,1:8:0:0,0,0	1/1:6,6:12:15.03:152,15,0	1/1:7,1:9:3.01:31,3,0	0/1:6,1:8:19.83:24,0,20	0/1:8,6:14:22.02:104,0,22	1/1:5,5:10:6.01:56,6,0	0/1:7,4:11:11.33:58,0,11	1/1:2,11:13:24.05:242,24,0	1/1:1,0:1:3.01:30,3,0
chr10	56709889	.	TTGTCTC	T	7614.48	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=8.334;DP=381;FS=5.194;HRun=0;HaplotypeScore=95.4841;InbreedingCoeff=0.9139;MQ=81.60;MQ0=2;MQRankSum=-9.864;QD=35.25;ReadPosRankSum=2.993;VQSLOD=4.4897;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:60.21:0,60,1945	0/0:2,0:2:6.02:0,6,178	0/0:34,0:29:23.32:0,23,1240	0/0:32,0:21:29.53:0,30,340	0/0:11,0:11:30.10:0,30,934	1/1:1,12:13:30.06:605,30,0	1/1:4,13:17:21.07:448,21,0	0/0:25,0:25:60.21:0,60,1703	1/1:2,12:14:24.08:523,24,0	1/1:2,8:10:24.08:468,24,0	1/1:2,3:5:9.03:166,9,0	1/1:1,8:9:21.07:458,21,0	0/0:20,0:20:54.19:0,54,1714	0/0:13,0:13:36.12:0,36,1159	1/1:2,9:11:18.06:383,18,0	1/1:1,8:9:18.06:385,18,0	1/1:2,13:15:21.07:458,21,0	1/1:1,13:14:21.07:444,21,0	1/1:1,6:7:18.05:325,18,0	1/1:3,6:9:18.06:369,18,0	1/1:2,8:10:12.04:256,12,0	1/1:3,8:11:24.04:442,24,0	1/1:4,10:14:24.08:488,24,0	1/1:4,10:14:11.41:247,11,0	1/1:2,9:11:12.04:246,12,0	1/1:2,12:14:36.10:632,36,0	1/1:2,6:8:12:205,12,0	1/1:0,1:1:3.01:65,3,0
chr10	56710725	.	GT	G	4497.18	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=11.298;DP=604;FS=1.139;HRun=7;HaplotypeScore=61.8375;InbreedingCoeff=0.9897;MQ=81.23;MQ0=0;MQRankSum=-1.058;QD=24.31;ReadPosRankSum=3.958;VQSLOD=5.2490;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,132,1632	0/0:10,0:10:27.09:0,27,340	0/0:15,0:15:35.96:0,36,413	0/0:19,0:19:39.12:0,39,471	0/0:25,0:25:54.17:0,54,678	1/1:1,20:21:57.13:582,57,0	1/1:3,14:17:42.09:429,42,0	0/0:33,0:33:87.25:0,87,1056	0/0:29,1:30:50.64:0,51,938	0/0:25,0:25:72.16:0,72,873	0/0:7,0:7:21.07:0,21,264	1/1:4,18:22:51.11:520,51,0	0/0:19,0:19:54.15:0,54,652	0/0:26,0:26:75.23:0,75,930	0/0:26,0:25:75.24:0,75,943	1/1:2,18:20:54.12:551,54,0	1/1:3,18:21:51.12:520,51,0	1/1:1,15:16:33.07:336,33,0	0/0:20,0:20:48.11:0,48,576	0/0:20,0:20:54.16:0,54,666	0/0:18,0:18:51.15:0,51,629	1/1:1,14:15:24.05:245,24,0	1/1:1,25:26:63.14:641,63,0	1/1:2,25:27:66.15:673,66,0	0/0:12,0:12:33.10:0,33,399	0/0:31,0:31:81.26:0,81,1016	0/0:28,0:28:75.24:0,75,941	0/0:5,0:5:9.03:0,9,113
chr10	56710993	.	A	AC	1060.06	PASS	AC=20;AF=0.370;AN=54;BaseQRankSum=9.160;DP=405;FS=9.539;HRun=2;HaplotypeScore=49.9493;InbreedingCoeff=0.9097;MQ=53.09;MQ0=10;MQRankSum=-3.846;QD=12.77;ReadPosRankSum=-1.147;VQSLOD=1.0307;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:75.22:0,75,917	0/0:6,0:6:15.03:0,15,172	0/0:9,0:5:2.98:0,3,21	0/0:21,0:10:20.55:0,21,224	0/0:24,0:23:36.11:0,36,445	0/0:21,0:20:36.11:0,36,446	0/0:20,0:18:45.13:0,45,557	0/0:21,0:20:51.16:0,51,632	1/1:1,3:4:10.80:60,11,0	1/1:4,6:10:21.87:199,22,0	1/1:3,2:5:11.35:90,11,0	0/0:13,0:12:24.08:0,24,297	0/0:13,0:12:27.04:0,27,316	0/0:18,0:18:39.12:0,39,482	1/1:3,3:6:16.79:123,17,0	0/0:22,0:21:45.14:0,45,557	0/0:40,2:40:27.91:0,28,535	0/0:11,0:9:12.04:0,12,149	1/1:8,2:4:5.84:40,6,0	1/1:6,5:11:21.73:137,22,0	1/1:8,3:10:23.24:223,23,0	0/0:12,0:12:15.04:0,15,186	0/0:9,0:9:14.90:0,15,186	0/0:20,0:19:27.08:0,27,335	./.	1/1:7,8:15:34.66:237,35,0	1/1:3,2:5:5.44:24,5,0	1/1:6,0:6:17.28:133,17,0
chr10	56710997	.	AC	A	535.74	PASS	AC=20;AF=0.370;AN=54;BaseQRankSum=10.380;DP=390;FS=10.169;HRun=2;HaplotypeScore=49.2069;InbreedingCoeff=0.8812;MQ=52.45;MQ0=8;MQRankSum=-5.194;QD=7.65;ReadPosRankSum=-0.715;VQSLOD=-0.3904;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:69.21:0,69,1011	0/0:6,0:6:18.03:0,18,245	0/0:11,0:3:3.01:0,3,44	0/0:19,0:7:18.06:0,18,242	0/0:24,0:23:36.08:0,36,513	0/0:19,0:18:36.12:0,36,533	0/0:18,0:16:39.09:0,39,557	0/0:22,0:21:60.16:0,60,840	1/1:1,3:4:9.11:43,9,0	1/1:3,5:8:13.97:89,14,0	1/1:3,2:5:7.55:57,8,0	0/0:12,0:11:21.07:0,21,312	0/0:14,0:11:20.91:0,21,314	0/0:19,0:19:36.09:0,36,539	1/1:3,3:6:15.08:98,15,0	0/0:22,0:21:48.08:0,48,669	0/0:41,2:40:35.46:0,35,660	0/0:11,0:8:15.05:0,15,225	1/1:3,2:2:2.60:10,3,0	1/1:2,7:9:15.69:67,16,0	1/1:6,3:8:19:135,19,0	0/0:12,0:12:15.05:0,15,225	0/0:8,0:8:14.87:0,15,222	0/0:19,0:18:27.09:0,27,400	./.	1/1:6,8:14:26.47:131,26,0	1/1:3,2:5:4.63:15,5,0	1/1:5,0:5:12.97:89,13,0
chr10	56711104	.	T	TA	1094.55	PASS	AB=1.000;AC=32;AF=0.615;AN=52;BaseQRankSum=0.569;DP=285;FS=14.547;HRun=9;HaplotypeScore=56.1559;InbreedingCoeff=0.5566;MQ=55.78;MQ0=8;MQRankSum=-4.898;QD=8.69;ReadPosRankSum=-2.749;VQSLOD=-0.0342;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,108,923	1/1:1,6:7:18.05:199,18,0	0/0:14,0:6:17.74:0,18,129	0/0:15,0:9:6.07:0,6,107	0/0:19,0:19:41.95:0,42,355	0/1:9,0:9:0:0,0,0	0/1:4,0:3:0:0,0,0	1/1:8,18:20:49.95:534,50,0	./.	1/1:4,0:3:6.40:41,6,0	0/1:3,0:3:14.29:23,0,14	0/0:6,0:8:2.94:0,3,8	0/0:14,0:14:35.96:0,36,306	0/0:18,0:18:38.93:0,39,332	1/1:2,0:2:0.47:1,0,0	0/0:11,0:14:5.43:0,5,15	1/1:6,0:6:2.04:6,2,0	0/1:10,0:10:0.33:15,0,0	1/1:2,0:2:5.89:39,6,0	1/1:6,0:6:12.66:78,13,0	1/1:2,1:3:2.99:24,3,0	./.	1/1:3,0:4:1.25:3,1,0	1/1:8,0:8:3.76:23,4,0	1/1:4,0:4:3.46:25,3,0	1/1:8,0:6:13.28:83,13,0	1/1:8,0:8:3.50:53,4,0	1/1:6,0:6:14.80:108,15,0
chr10	56711112	.	A	AG	1246.81	PASS	AB=0.905;AC=31;AF=0.596;AN=52;BaseQRankSum=5.046;DP=261;FS=1.158;HRun=0;HaplotypeScore=56.6878;InbreedingCoeff=0.5324;MQ=68.58;MQ0=6;MQRankSum=-5.100;QD=11.99;ReadPosRankSum=1.403;VQSLOD=3.8563;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,123,1536	1/1:7,0:7:12.27:47,12,0	0/0:17,0:9:23.66:0,24,221	0/0:22,0:14:20.34:0,20,218	0/0:16,0:16:48.12:0,48,585	./.	0/0:2,0:2:2.98:0,3,22	0/1:24,0:21:63.01:63,0,70	1/1:1,0:1:2.94:18,3,0	1/1:0,4:4:11.91:107,12,0	1/1:1,2:3:3.43:53,3,0	0/0:7,0:6:3.44:0,3,81	0/0:15,0:15:39.12:0,39,516	0/0:20,0:20:57.02:0,57,664	1/1:2,0:2:2.94:18,3,0	1/1:3,0:3:6.29:19,6,0	0/1:4,0:4:15.26:15,0,49	0/0:8,0:7:2.35:0,2,39	1/1:0,6:6:18.03:191,18,0	1/1:2,4:6:10.38:152,10,0	1/1:6,1:7:12:116,12,0	./.	1/1:1,0:1:3:27,3,0	1/1:7,0:6:8.97:84,9,0	0/1:3,2:5:7:95,0,7	1/1:1,5:6:11.10:125,11,0	1/1:3,6:9:8.97:98,9,0	1/1:2,6:9:15.04:198,15,0
chr10	56711115	.	AGAGAGAGAGAGAGACTTGCTATATAAATCATGCTGGCGG	A	1865.55	PASS	AB=0.852;AC=6;AF=0.111;AN=54;BaseQRankSum=4.142;DP=268;FS=28.068;HRun=0;HaplotypeScore=233.7089;InbreedingCoeff=-0.1607;MQ=71.87;MQ0=6;MQRankSum=-2.650;QD=53.30;ReadPosRankSum=1.118;VQSLOD=0.8130;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,117,13327	0/0:7,0:7:21.07:0,21,3114	0/0:19,0:11:33.05:0,33,2022	0/0:23,0:15:33.09:0,33,2147	0/0:13,0:13:39.13:0,39,4276	./.	0/0:2,0:2:6.02:0,6,791	0/0:25,0:22:63.22:0,63,5211	0/0:1,0:1:3.01:0,3,430	0/0:4,0:4:12.01:0,12,1228	0/0:3,0:3:9.03:0,9,768	0/1:5,3:7:99:573,0,1987	0/0:15,0:15:39.13:0,39,4467	0/0:20,0:20:54.19:0,54,7104	0/0:2,0:2:3.01:0,3,492	0/1:2,3:5:99:880,0,502	0/1:5,0:5:9.67:10,0,1448	0/1:8,1:8:99:281,0,1912	0/0:7,0:7:21.07:0,21,1288	0/0:6,0:6:12.04:0,12,1116	0/0:7,0:7:18.06:0,18,2160	0/0:1,0:1:3.01:0,3,334	0/1:2,0:2:20.81:21,0,458	0/1:5,1:5:99:220,0,658	0/0:5,0:5:15.05:0,15,1409	0/0:6,0:6:15.05:0,15,849	0/0:9,0:9:12.51:0,13,1166	0/0:9,0:9:21.07:0,21,2276
chr10	56711680	.	C	CCGAGG	12443.65	PASS	AB=0.720;AC=39;AF=0.750;AN=52;BaseQRankSum=2.755;DP=346;FS=7.899;HRun=0;HaplotypeScore=65.2033;InbreedingCoeff=0.5787;MQ=37.39;MQ0=32;MQRankSum=-6.626;QD=45.75;ReadPosRankSum=0.749;VQSLOD=3.9615;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:31:87.23:0,87,1882	0/0:9,0:8:18.06:0,18,268	./.	./.	0/0:15,0:13:30.09:0,30,653	1/1:3,14:15:39.09:1206,39,0	1/1:6,17:20:36.12:1174,36,0	0/1:27,0:21:11.82:12,0,639	1/1:2,13:15:27.09:868,27,0	1/1:1,14:15:44.82:1386,45,0	1/1:2,5:7:6.02:197,6,0	1/1:1,14:15:33.11:1069,33,0	0/0:7,0:7:14.89:0,15,301	0/0:9,0:9:27.09:0,27,627	0/1:2,10:13:40.08:570,0,40	1/1:2,7:8:15.05:492,15,0	0/1:5,8:10:43.39:476,0,43	1/1:3,7:10:12.04:396,12,0	1/1:1,10:10:30.10:969,30,0	1/1:1,1:2:3.01:97,3,0	1/1:4,9:11:15.05:480,15,0	1/1:5,5:9:12.04:394,12,0	1/1:7,2:7:5.55:196,6,0	1/1:5,6:11:3.01:98,3,0	1/1:2,4:5:9.03:295,9,0	1/1:1,10:11:32.62:789,33,0	1/1:3,9:12:18.06:590,18,0	1/1:0,9:10:21.07:691,21,0
chr10	56711793	.	A	AAAATAAAT	4972.40	PASS	AB=1.000;AC=35;AF=0.729;AN=48;BaseQRankSum=3.550;DP=285;FS=2.751;HRun=0;HaplotypeScore=74.5944;InbreedingCoeff=0.6259;MQ=47.26;MQ0=11;MQRankSum=-6.511;QD=28.91;ReadPosRankSum=-0.038;VQSLOD=4.1298;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:24.08:0,24,596	0/0:7,0:7:18.06:0,18,437	0/0:14,0:2:0:0,0,0	./.	0/0:9,0:9:15.04:0,15,335	1/1:15,0:15:15.05:331,15,0	1/1:7,0:7:9.03:146,9,0	0/0:35,0:34:48.15:0,48,924	1/1:8,0:8:3.01:89,3,0	1/1:9,0:9:15.05:382,15,0	1/1:8,0:8:9.03:267,9,0	./.	0/0:6,0:6:9.03:0,9,208	./.	1/1:8,0:8:9.03:332,9,0	1/1:5,0:4:6.02:70,6,0	0/1:20,0:20:1.63:632,0,2	1/1:16,0:16:30.10:603,30,0	1/1:12,1:13:21.02:420,21,0	1/1:10,1:11:9.03:342,9,0	1/1:5,0:5:3.01:111,3,0	1/1:4,0:4:3.01:103,3,0	1/1:4,0:4:3:25,3,0	./.	1/1:11,0:11:3.01:53,3,0	1/1:12,0:12:9.03:262,9,0	1/1:5,5:11:9.03:359,9,0	1/1:5,0:5:15.05:445,15,0
chr10	56711817	.	TAA	T	1670.62	PASS	AB=0.875;AC=38;AF=0.679;AN=56;BaseQRankSum=4.378;DP=243;FS=10.886;HRun=14;HaplotypeScore=47.9729;InbreedingCoeff=0.6081;MQ=55.23;MQ0=8;MQRankSum=-2.009;QD=10.78;ReadPosRankSum=2.161;VQSLOD=0.9579;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:40.36:0,40,523	0/0:7,0:7:15.05:0,15,210	0/0:15,0:7:11.86:0,12,94	0/0:12,0:1:0.47:0,0,1	0/1:10,1:11:0.74:1,0,269	1/1:3,10:14:17.67:200,18,0	1/1:3,1:4:5.95:55,6,0	0/0:26,0:26:56.34:0,56,671	1/1:1,1:2:5.60:37,6,0	1/1:6,4:10:9.11:113,9,0	1/1:2,4:7:17.09:117,17,0	1/1:1,2:4:8.59:53,9,0	0/0:6,0:6:12.04:0,12,165	0/0:2,0:2:6.02:0,6,84	1/1:4,0:4:11.33:56,11,0	0/0:3,0:2:5.84:0,6,34	1/1:9,12:21:25.03:329,25,0	1/1:11,0:12:5.78:43,6,0	1/1:12,10:20:13.69:300,14,0	0/1:4,1:5:1.92:33,0,2	1/1:1,3:4:9.01:83,9,0	1/1:2,0:2:2.68:11,3,0	1/1:0,1:1:3:28,3,0	1/1:1,0:1:3:28,3,0	1/1:1,6:7:2.98:28,3,0	1/1:3,1:4:5.67:28,6,0	1/1:6,0:6:3.80:37,4,0	1/1:4,8:13:32.63:266,33,0
chr10	56711819	.	A	AATATTT	2723.49	PASS	AB=0.909;AC=23;AF=0.411;AN=56;BaseQRankSum=2.283;DP=254;FS=19.262;HRun=0;HaplotypeScore=64.4491;InbreedingCoeff=-0.1315;MQ=59.81;MQ0=9;MQRankSum=-4.952;QD=19.05;ReadPosRankSum=1.029;VQSLOD=0.9976;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:42.14:0,42,933	0/0:7,0:7:18.05:0,18,364	0/0:17,0:8:16.76:0,17,122	0/0:16,0:3:5.23:0,5,36	0/0:13,0:13:36.09:0,36,659	0/1:13,0:14:99:149,0,104	1/1:4,0:4:1.84:65,2,0	0/0:27,0:26:68.71:0,69,1406	0/1:2,0:2:18.77:21,0,19	0/1:8,0:8:59.48:168,0,59	0/1:5,2:7:32.51:220,0,33	0/0:4,0:4:9:0,9,81	0/0:5,0:5:15.05:0,15,290	0/0:3,0:3:6.02:0,6,116	0/1:1,5:6:12.84:286,0,13	0/0:3,0:2:3.06:0,3,8	0/1:21,0:22:99:153,0,145	0/1:12,0:12:76.02:133,0,76	0/1:22,1:20:99:352,0,233	0/1:4,1:5:12.74:240,0,13	0/1:5,0:5:19.27:19,0,25	1/1:0,0:2:3.01:79,3,0	1/1:1,0:1:3:28,3,0	1/1:1,0:1:3:28,3,0	0/1:8,0:8:21.75:22,0,33	1/1:3,1:4:9.03:274,9,0	0/1:6,0:6:22.68:276,0,23	0/1:10,3:13:77.98:376,0,78
chr10	56711830	.	AAG	A	176.13	PASS	AB=0.950;AC=17;AF=0.304;AN=56;BaseQRankSum=7.597;DP=268;FS=7.458;HRun=0;HaplotypeScore=48.7689;InbreedingCoeff=-0.0109;MQ=67.27;MQ0=6;MQRankSum=-2.471;QD=1.41;ReadPosRankSum=5.977;VQSLOD=-0.6210;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:19.88:0,20,471	0/0:6,0:6:18.03:0,18,217	0/0:18,0:9:8.31:0,8,107	0/0:16,0:5:2.94:0,3,28	0/0:16,0:16:31.33:0,31,407	0/1:15,0:15:25.13:25,0,56	0/1:3,0:3:5.74:6,0,11	0/0:34,0:33:46.64:0,47,896	1/1:2,0:2:4.15:19,4,0	0/1:7,0:7:24.87:25,0,33	0/1:11,0:11:11.38:11,0,98	1/1:4,0:4:5.80:33,6,0	0/0:4,0:4:11.87:0,12,143	0/0:4,0:4:11.89:0,12,114	0/1:6,1:7:10.18:10,0,24	0/0:5,0:4:5.52:0,6,49	0/1:19,0:19:22.60:96,0,23	0/1:9,0:9:6.34:6,0,109	0/1:24,0:22:18.11:18,0,160	0/1:2,0:2:0.30:0,0,0	0/1:6,0:6:8.33:8,0,57	0/0:2,0:2:5.03:0,5,31	0/0:4,0:4:2.66:0,3,65	0/0:3,0:3:0.78:0,1,40	0/0:9,0:9:6.71:0,7,70	0/0:5,0:5:9.34:0,9,49	0/1:1,3:4:8.91:41,0,9	1/1:12,0:12:5.88:26,6,0
chr10	56713108	.	TGGGTC	T	389.92	PASS	AB=0.953;AC=18;AF=0.333;AN=54;BaseQRankSum=9.726;DP=368;FS=32.445;HRun=0;HaplotypeScore=135.4733;InbreedingCoeff=-0.3313;MQ=37.15;MQ0=5;MQRankSum=-5.783;QD=1.88;ReadPosRankSum=7.531;VQSLOD=0.2844;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,1:29:30.89:0,31,758	0/0:3,0:3:9.02:0,9,94	./.	0/0:6,0:3:4.98:0,5,51	0/0:14,0:15:2.92:0,3,314	0/1:15,0:14:31.25:31,0,183	0/1:11,1:12:66.25:66,0,228	0/0:23,0:23:59.73:0,60,697	0/1:14,0:14:14.18:14,0,104	0/1:15,0:15:0.45:0,0,178	1/1:9,0:9:9.77:29,10,0	0/1:10,3:13:99:142,0,149	0/1:8,0:9:12.81:13,0,236	0/0:12,0:14:29.39:0,29,392	0/1:25,0:24:21.72:22,0,107	0/1:11,2:13:73.07:73,0,263	0/1:10,1:11:35.31:35,0,244	0/1:8,0:7:7.47:7,0,216	0/0:17,0:17:14.79:0,15,309	0/1:13,0:12:4.20:4,0,50	0/0:19,0:19:2.83:0,3,77	0/1:4,0:4:37.08:37,0,95	0/1:3,0:3:34.44:41,0,34	0/1:4,1:5:12.22:12,0,20	0/0:6,0:8:2.61:0,3,93	0/0:19,0:18:12.98:0,13,243	0/1:28,0:27:6.18:6,0,117	0/1:10,0:9:1.44:1,0,12
chr10	56714269	.	CT	C	2684.54	PASS	AB=0.875;AC=41;AF=0.732;AN=56;BaseQRankSum=7.807;DP=356;FS=7.894;HRun=12;HaplotypeScore=47.4011;InbreedingCoeff=0.7851;MQ=60.67;MQ0=2;MQRankSum=1.693;QD=10.45;ReadPosRankSum=3.570;VQSLOD=2.3118;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:54.10:0,54,542	0/1:6,1:7:2.71:3,0,79	0/0:7,0:2:3.01:0,3,30	0/0:7,0:5:7.25:0,7,61	0/0:8,0:8:21.04:0,21,213	1/1:3,0:24:35.31:107,35,0	1/1:0,0:8:12.22:35,12,0	0/0:37,1:37:57.84:0,58,742	1/1:1,3:4:8.97:70,9,0	1/1:5,17:22:47.75:369,48,0	1/1:6,10:17:28.90:215,29,0	1/1:1,0:15:26.48:76,26,0	0/0:11,0:11:21.03:0,21,207	0/0:6,0:5:6.01:0,6,61	1/1:4,11:15:32.86:255,33,0	1/1:0,0:4:8.15:24,8,0	1/1:1,0:18:34.63:100,35,0	1/1:4,1:18:27.42:94,27,0	1/1:7,14:21:17.65:281,18,0	1/1:0,7:7:14.93:116,15,0	1/1:3,4:7:11.93:93,12,0	1/1:2,0:3:2.03:6,2,0	1/1:0,0:9:14.26:41,14,0	1/1:1,0:2:2.03:6,2,0	1/1:2,16:17:41.83:325,42,0	1/1:3,12:15:35.85:278,36,0	1/1:1,9:10:20.90:163,21,0	1/1:1,10:12:28.86:215,29,0
chr10	56715154	.	A	AAC	3203.34	PASS	AB=0.634;AC=42;AF=0.750;AN=56;BaseQRankSum=7.400;DP=604;FS=2.333;HRun=0;HaplotypeScore=168.9785;InbreedingCoeff=0.6778;MQ=63.66;MQ0=2;MQRankSum=-8.117;QD=7.50;ReadPosRankSum=-2.854;VQSLOD=2.6855;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:37:71.75:0,72,771	0/1:5,11:16:2.21:440,0,2	0/0:35,0:24:22.77:0,23,239	0/0:33,0:28:22.60:0,23,240	0/0:21,0:21:48.08:0,48,537	1/1:27,0:27:23.67:176,24,0	1/1:19,0:19:5.99:48,6,0	0/1:14,12:27:25.46:543,0,25	1/1:22,0:22:12:104,12,0	1/1:19,0:19:23.90:192,24,0	1/1:17,0:17:2.80:13,3,0	1/1:16,0:16:11.96:93,12,0	0/0:21,0:21:51.11:0,51,569	0/0:29,0:29:66.18:0,66,768	1/1:14,0:14:3:26,3,0	1/1:37,0:37:59.87:491,60,0	1/1:18,0:18:14.93:117,15,0	1/1:21,0:21:29.95:246,30,0	1/1:15,0:15:5.97:46,6,0	1/1:21,0:18:6:52,6,0	1/1:16,1:17:9.28:85,9,0	1/1:21,0:21:14.71:107,15,0	1/1:21,0:21:11.96:94,12,0	1/1:21,0:20:11.23:71,11,0	1/1:13,0:13:11.41:84,11,0	1/1:22,0:22:21.47:187,21,0	1/1:16,0:16:15:129,15,0	1/1:7,0:7:5.97:46,6,0
chr10	56715172	.	C	CAT	1181.10	PASS	AB=0.959;AC=25;AF=0.446;AN=56;BaseQRankSum=11.777;DP=680;FS=3.782;HRun=0;HaplotypeScore=175.6157;InbreedingCoeff=-0.0417;MQ=54.71;MQ0=2;MQRankSum=-5.559;QD=2.63;ReadPosRankSum=5.601;VQSLOD=2.0946;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,114,1360	0/1:17,0:17:99:180,0,121	0/0:44,0:26:57.25:0,57,690	0/0:32,0:24:44.97:0,45,600	0/0:21,0:21:63.12:0,63,840	0/1:30,0:30:26.30:26,0,48	0/1:23,0:23:5.24:5,0,18	0/1:26,0:26:99:185,0,270	0/1:24,0:24:19.04:19,0,25	0/1:23,0:23:15.34:15,0,67	0/0:14,0:14:3.46:0,3,25	1/1:24,0:24:12.41:45,12,0	0/0:22,0:22:66.09:0,66,866	0/0:32,0:32:93.16:0,93,1218	1/1:16,0:16:2.50:9,2,0	0/1:22,14:36:31.39:480,0,31	0/1:20,2:22:41.08:41,0,201	0/1:15,4:19:99:135,0,121	0/0:12,0:12:0.51:0,1,78	0/1:24,0:21:11.43:11,0,55	1/1:26,0:25:1.84:16,2,0	1/1:30,0:30:17.92:77,18,0	1/1:22,0:22:9.61:33,10,0	0/1:24,0:23:12.71:18,0,13	1/1:16,0:16:7.36:26,7,0	0/1:28,0:28:3.74:4,0,173	0/1:19,0:19:23.73:24,0,26	0/0:10,0:10:5.83:0,6,34
chr10	56715175	.	A	ACATACACACACACACG	26972.19	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=3.908;DP=746;FS=3.217;HRun=0;HaplotypeScore=283.8962;InbreedingCoeff=0.9426;MQ=58.79;MQ0=2;MQRankSum=-11.502;QD=52.78;ReadPosRankSum=2.034;VQSLOD=3.9315;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,111,3470	0/0:16,0:16:45.14:0,45,1146	0/0:46,0:29:69.30:0,69,1335	0/0:30,0:22:53.96:0,54,1287	0/0:20,0:20:60.13:0,60,1991	1/1:14,17:36:39.61:2805,40,0	1/1:9,15:31:17.70:1053,18,0	0/0:27,0:27:57.61:0,58,1176	1/1:12,0:31:18.06:1180,18,0	1/1:7,0:30:54.38:1220,54,0	1/1:9,0:15:12.04:751,12,0	1/1:9,12:28:27.09:2006,27,0	0/0:20,0:20:60.21:0,60,2392	0/0:31,0:31:84.23:0,84,3191	1/1:9,0:19:15.05:981,15,0	1/1:22,0:36:65.56:2449,66,0	1/1:21,0:23:53.79:1100,54,0	1/1:15,0:19:51.08:1548,51,0	1/1:6,0:20:34.42:1244,34,0	1/1:10,0:20:12.04:771,12,0	1/1:6,0:29:8.54:140,9,0	1/1:8,18:35:21.07:1605,21,0	1/1:9,12:24:20.81:1663,21,0	1/1:6,16:27:5.66:475,6,0	1/1:6,0:18:8.56:786,9,0	1/1:14,0:33:84.93:3460,85,0	1/1:6,0:22:21.32:1353,21,0	1/1:10,0:10:20.90:383,21,0
chr10	56717450	.	T	TA	690.39	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-7.312;DP=446;FS=13.687;HRun=10;HaplotypeScore=62.3391;InbreedingCoeff=0.7764;MQ=61.21;MQ0=18;MQRankSum=-1.356;QD=18.17;ReadPosRankSum=-3.170;VQSLOD=2.2092;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:59.91:0,60,487	1/1:0,11:11:33.05:341,33,0	0/0:24,0:9:20.44:0,20,133	0/0:20,1:8:2.13:0,2,30	0/0:22,0:23:64.94:0,65,520	0/0:23,0:23:56.84:0,57,457	0/0:10,0:9:20.97:0,21,172	1/1:11,16:22:4.85:460,5,0	0/0:8,0:8:23.95:0,24,193	0/0:14,0:13:35.96:0,36,296	0/0:19,0:20:55.95:0,56,446	0/0:13,0:13:35.89:0,36,288	0/0:9,0:9:23.97:0,24,197	0/0:13,0:13:29.96:0,30,246	0/0:10,0:10:26.96:0,27,220	0/0:14,0:14:35.95:0,36,294	0/0:21,0:20:56.82:0,57,451	0/0:23,0:23:64.80:0,65,508	0/0:17,0:15:29.90:0,30,246	0/0:13,0:14:34.99:0,35,277	0/0:8,0:6:16.79:0,17,126	0/0:4,0:4:8.99:0,9,74	0/0:11,0:12:35:0,35,277	0/0:3,0:3:8.99:0,9,74	0/0:18,0:18:47.88:0,48,386	0/0:19,0:19:47.91:0,48,392	0/0:33,0:33:86.83:0,87,706	0/0:11,0:10:20.96:0,21,172
chr10	56717593	.	GT	G	10663.11	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=7.864;DP=527;FS=0.923;HRun=8;HaplotypeScore=59.5753;InbreedingCoeff=0.9941;MQ=77.98;MQ0=0;MQRankSum=0.845;QD=25.09;ReadPosRankSum=0.995;VQSLOD=5.6171;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:60.17:0,60,713	1/1:1,6:7:18.03:174,18,0	0/0:13,0:14:30.56:0,31,354	0/0:10,0:10:18.03:0,18,193	0/0:35,0:35:99:0,99,1174	1/1:1,14:15:39.06:376,39,0	1/1:1,8:9:21.03:203,21,0	1/1:2,40:42:99:1110,117,0	1/1:0,19:19:54.09:521,54,0	1/1:2,25:27:72.06:677,72,0	1/1:3,20:23:54.08:521,54,0	1/1:1,22:23:60.09:579,60,0	0/0:9,0:9:24.07:0,24,290	0/0:13,0:13:30.09:0,30,362	1/1:2,20:22:54.09:521,54,0	1/1:0,20:20:51.08:492,51,0	1/1:1,17:18:42.06:406,42,0	1/1:1,14:15:33.05:319,33,0	1/1:2,12:14:36.03:337,36,0	1/1:1,30:31:87.13:840,87,0	1/1:2,13:15:30.04:290,30,0	1/1:1,7:8:21.03:203,21,0	1/1:2,18:20:51.08:492,51,0	1/1:0,14:14:36.06:348,36,0	1/1:1,19:20:54.09:521,54,0	1/1:1,22:23:66.09:632,66,0	1/1:1,29:30:84.13:811,84,0	1/1:0,10:10:30.05:290,30,0
chr10	56719948	.	AGAACC	A	1826	PASS	AB=0.944;AC=18;AF=0.333;AN=54;BaseQRankSum=9.264;DP=375;FS=24.832;HRun=0;HaplotypeScore=83.0224;InbreedingCoeff=-0.5005;MQ=42.84;MQ0=27;MQRankSum=-5.470;QD=8.23;ReadPosRankSum=-3.854;VQSLOD=-0.5117;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:42:99:0,114,2750	0/0:7,0:7:11.91:0,12,215	0/1:9,0:3:3.44:3,0,64	./.	0/0:9,0:9:24.08:0,24,591	0/1:8,0:7:99:137,0,255	0/0:11,0:7:5.92:0,6,153	0/1:14,1:14:57.05:57,0,652	0/1:16,1:14:99:212,0,317	0/1:20,1:20:99:235,0,591	0/1:7,2:9:99:197,0,151	0/1:6,0:6:75.73:76,0,212	0/0:11,0:12:36.12:0,36,774	0/0:21,0:18:47.95:0,48,908	0/1:6,1:7:64.19:64,0,126	0/1:13,0:13:27.43:27,0,514	0/1:12,0:6:78.07:78,0,131	0/1:18,0:15:99:115,0,345	0/0:20,0:19:15.64:0,16,835	0/1:14,0:14:99:105,0,329	0/1:13,0:9:99:112,0,222	0/1:9,0:9:99:153,0,252	0/1:3,3:6:49.26:49,0,111	0/0:9,0:7:16.44:0,16,381	0/1:10,0:10:82.74:83,0,189	0/1:15,1:12:72.04:72,0,359	0/1:17,1:16:99:205,0,537	0/0:9,0:8:20.86:0,21,360
chr10	56719965	.	AC	A	1673.03	PASS	AB=0.973;AC=45;AF=0.804;AN=56;BaseQRankSum=6.703;DP=363;FS=3.188;HRun=1;HaplotypeScore=72.3687;InbreedingCoeff=0.5205;MQ=50.35;MQ0=23;MQRankSum=-7.773;QD=6.08;ReadPosRankSum=-1.988;VQSLOD=-0.0584;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,1:42:85.59:0,86,934	1/1:4,0:4:3.27:8,3,0	0/1:22,1:9:8.41:8,0,101	0/1:23,1:6:7.68:8,0,21	0/0:16,0:16:42.68:0,43,376	1/1:7,0:7:16.27:98,16,0	1/1:8,0:5:7.16:42,7,0	1/1:25,0:23:41.11:225,41,0	1/1:14,1:13:0.85:57,1,0	1/1:20,1:21:10.12:180,10,0	1/1:13,0:13:7.86:50,8,0	1/1:4,0:4:10.17:69,10,0	0/0:9,0:9:21.80:0,22,218	0/0:20,0:17:37.50:0,37,368	1/1:8,0:8:10.01:56,10,0	1/1:7,0:7:13.93:81,14,0	1/1:11,0:7:14.86:105,15,0	1/1:12,0:10:18.34:100,18,0	1/1:13,2:14:22.54:202,23,0	1/1:12,0:12:15.36:105,15,0	1/1:9,0:5:5.63:38,6,0	1/1:4,0:4:11.82:77,12,0	1/1:6,0:6:6.44:49,6,0	1/1:6,0:4:1.25:4,1,0	1/1:8,0:8:12.59:64,13,0	1/1:14,0:12:21.46:138,21,0	1/1:13,0:11:10.34:32,10,0	0/1:6,0:6:13.66:47,0,14
chr10	56719970	.	AAAAAAC	A	1375.55	PASS	AB=0.988;AC=18;AF=0.321;AN=56;BaseQRankSum=2.463;DP=371;FS=16.596;HRun=0;HaplotypeScore=102.3387;InbreedingCoeff=-0.3422;MQ=53.16;MQ0=20;MQRankSum=-0.065;QD=6.58;ReadPosRankSum=-0.999;VQSLOD=0.4554;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:39:99:0,105,3469	0/0:4,0:4:9:0,9,136	0/0:23,0:9:24.08:0,24,609	0/0:25,0:7:19.88:0,20,355	0/0:16,0:16:48.11:0,48,1460	0/0:7,0:7:12.04:0,12,147	0/1:8,0:6:11.72:12,0,104	0/1:26,0:24:16.29:16,0,596	0/1:15,0:13:65.88:80,0,66	0/1:23,0:23:99:313,0,170	0/1:12,0:12:66.12:124,0,66	0/0:4,0:4:8.50:0,9,70	0/0:9,0:9:27.09:0,27,947	0/0:20,0:17:45.07:0,45,1353	0/1:8,0:8:6.23:64,0,6	0/0:8,0:8:9.02:0,9,204	0/1:10,0:7:21.26:21,0,21	0/1:12,0:10:13.44:13,0,223	0/1:12,4:15:99:177,0,105	0/1:13,0:13:64.04:124,0,64	0/1:9,0:6:21.33:53,0,21	0/1:4,0:4:20.07:20,0,45	0/0:6,0:6:2.50:0,2,5	1/1:7,0:5:2.13:18,2,0	0/1:8,0:8:19.85:20,0,28	0/1:14,0:12:63.15:63,0,127	0/1:19,0:17:82.64:391,0,83	0/1:5,0:5:20.02:23,0,20
chr10	56719971	.	A	AAC	482.16	PASS	AB=0.947;AC=13;AF=0.232;AN=56;BaseQRankSum=4.912;DP=377;FS=7.033;HRun=0;HaplotypeScore=87.7295;InbreedingCoeff=-0.1577;MQ=53.41;MQ0=20;MQRankSum=-1.774;QD=3.09;ReadPosRankSum=-1.526;VQSLOD=1.1313;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:39:99:0,102,1513	0/0:4,0:4:8.93:0,9,63	0/0:23,0:9:24:0,24,292	0/0:25,0:7:6.24:0,6,152	0/0:17,0:17:48.11:0,48,672	0/0:7,0:7:3.28:0,3,86	0/0:8,0:6:8.66:0,9,60	0/0:27,0:25:57.15:0,57,387	0/1:14,1:13:63.17:63,0,66	0/1:21,1:22:94.99:95,0,118	0/1:11,1:12:35.75:36,0,50	0/0:4,0:4:10.18:0,10,68	0/0:9,0:9:27.09:0,27,399	0/0:20,0:17:45.04:0,45,601	1/1:8,0:9:9.21:41,9,0	0/0:8,0:8:17.99:0,18,119	0/1:11,0:8:2.71:3,0,16	0/0:12,0:10:20.06:0,20,121	0/1:14,0:14:28.11:113,0,28	0/1:12,0:14:69.97:85,0,70	0/1:10,0:7:14.44:18,0,14	0/0:4,0:4:1.31:0,1,18	0/0:6,0:6:8.94:0,9,70	0/0:7,0:5:6.43:0,6,54	0/1:8,0:8:29.89:36,0,30	0/1:13,0:12:40.28:40,0,64	0/1:20,0:18:39.59:60,0,40	0/1:5,1:6:19.90:42,0,20
chr10	56719972	.	A	AC	715.70	PASS	AB=0.990;AC=16;AF=0.286;AN=56;BaseQRankSum=6.691;DP=376;FS=15.395;HRun=0;HaplotypeScore=79.5758;InbreedingCoeff=0.3056;MQ=56.67;MQ0=20;MQRankSum=-3.395;QD=5.04;ReadPosRankSum=-0.604;VQSLOD=2.0574;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:39:99:0,102,1413	0/0:4,0:4:8.95:0,9,72	0/0:24,0:10:23.79:0,24,273	0/0:26,0:8:20.80:0,21,182	0/0:17,0:17:51.11:0,51,656	0/0:7,0:7:5.69:0,6,99	0/0:8,0:6:7.13:0,7,48	0/0:26,0:24:58.49:0,58,402	0/1:14,1:13:21.36:51,0,21	0/1:21,0:21:34.07:152,0,34	1/1:12,0:12:1.39:43,1,0	0/0:4,0:4:11.87:0,12,84	0/0:10,0:10:27.09:0,27,370	0/0:20,0:17:45.05:0,45,568	1/1:9,0:9:9.72:47,10,0	0/0:7,0:7:19.30:0,19,123	0/0:12,0:9:12.39:0,12,75	0/0:12,0:10:23.41:0,23,157	0/1:15,0:14:27.55:75,0,28	1/1:12,1:13:1.92:103,2,0	0/1:10,0:7:15.36:37,0,15	0/0:4,0:4:9.54:0,10,50	0/0:6,0:6:8.94:0,9,69	0/0:7,0:5:6.47:0,6,54	1/1:5,2:8:12.63:85,13,0	0/1:13,0:11:42.01:49,0,42	1/1:19,1:18:18.48:186,18,0	0/1:6,0:6:26.86:57,0,27
chr10	56719975	.	AC	A	3680.43	PASS	AB=0.833;AC=41;AF=0.732;AN=56;BaseQRankSum=6.719;DP=362;FS=6.827;HRun=2;HaplotypeScore=67.2242;InbreedingCoeff=0.8075;MQ=64.00;MQ0=16;MQRankSum=-6.270;QD=16.88;ReadPosRankSum=-3.126;VQSLOD=2.5025;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,102,1316	0/0:3,0:3:2.97:0,3,10	0/0:26,0:12:30.53:0,31,365	0/0:27,0:10:28.85:0,29,241	0/0:17,0:17:48.09:0,48,616	1/1:7,0:7:9.36:71,9,0	1/1:8,0:6:7.56:39,8,0	1/1:22,0:21:36.05:279,36,0	1/1:8,5:12:26.65:279,27,0	1/1:7,13:20:47.73:567,48,0	1/1:6,6:12:27.41:287,27,0	1/1:4,0:4:8.19:58,8,0	0/0:12,0:12:36.01:0,36,422	0/0:18,0:16:39.06:0,39,501	1/1:1,8:9:11.97:133,12,0	0/1:4,0:5:5.48:37,0,5	1/1:14,0:12:24.35:181,24,0	1/1:10,0:8:11.20:94,11,0	1/1:10,0:9:26.83:222,27,0	1/1:4,8:12:31.18:285,31,0	1/1:7,1:6:11.76:104,12,0	1/1:4,0:4:10.32:55,10,0	1/1:6,0:6:5.74:40,6,0	1/1:6,0:5:8.96:72,9,0	1/1:6,3:9:19.77:172,20,0	1/1:8,3:9:16.56:158,17,0	1/1:11,7:17:39.32:444,39,0	1/1:7,0:7:16.38:103,16,0
chr10	56719976	.	C	CAAAA	4712.13	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=7.405;DP=356;FS=15.673;HRun=9;HaplotypeScore=81.2307;InbreedingCoeff=0.7957;MQ=64.67;MQ0=15;MQRankSum=-6.849;QD=21.71;ReadPosRankSum=-2.305;VQSLOD=1.0432;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,102,1923	1/1:3,0:3:1.98:16,2,0	0/0:26,0:12:33.07:0,33,522	0/0:27,0:10:25.37:0,25,341	0/0:18,0:18:48.16:0,48,957	1/1:7,0:7:8.34:96,8,0	1/1:9,0:7:6.46:56,6,0	1/1:25,0:23:19.03:132,19,0	1/1:12,1:12:26.66:317,27,0	1/1:17,1:18:45.74:718,46,0	1/1:10,1:11:28.01:352,28,0	1/1:4,0:4:3.95:48,4,0	0/0:12,0:12:36.01:0,36,591	0/0:17,0:15:38.74:0,39,759	1/1:9,1:10:12.04:245,12,0	1/1:5,0:5:8:87,8,0	1/1:14,0:11:17.75:124,18,0	1/1:10,0:8:15.07:136,15,0	1/1:9,1:9:26.97:337,27,0	1/1:10,2:12:31.25:412,31,0	1/1:6,0:5:11.91:161,12,0	1/1:4,0:4:11.89:122,12,0	1/1:6,0:6:1.51:15,2,0	1/1:7,0:5:3.35:20,3,0	1/1:8,1:9:20.89:264,21,0	1/1:10,1:9:17.84:247,18,0	1/1:18,0:17:45.36:621,45,0	1/1:4,1:5:12.02:187,12,0
chr10	56722522	.	AAC	A	2496.07	PASS	AB=0.758;AC=28;AF=0.538;AN=52;BaseQRankSum=1.581;DP=637;FS=4.956;HRun=0;HaplotypeScore=103.2588;InbreedingCoeff=0.7316;MQ=65.17;MQ0=7;MQRankSum=2.240;QD=7.80;ReadPosRankSum=3.054;VQSLOD=3.2113;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:43,2:44:35.90:0,36,868	1/1:5,0:13:17.04:84,17,0	./.	./.	0/1:15,2:17:39.13:39,0,198	1/1:3,17:21:36.40:378,36,0	1/1:21,7:29:15.51:166,16,0	1/1:18,0:17:1.82:5,2,0	0/0:14,0:24:11.99:0,12,101	0/0:18,0:19:25.80:0,26,222	0/0:7,0:8:8.96:0,9,71	1/1:14,16:30:39.10:427,39,0	1/1:10,0:19:5.73:78,6,0	1/1:11,0:26:28.35:140,28,0	0/0:7,0:19:7.04:0,7,49	0/1:11,15:28:9.53:288,0,10	1/1:17,9:29:28.83:245,29,0	1/1:7,9:17:17:177,17,0	0/0:11,0:11:8.93:0,9,63	0/0:6,0:9:11.99:0,12,103	0/0:32,0:52:24.08:0,24,223	1/1:9,8:17:12.72:191,13,0	1/1:10,6:17:17.88:179,18,0	1/1:11,9:24:32.42:287,32,0	1/1:13,0:14:2.56:10,3,0	0/0:24,0:32:42.74:0,43,373	0/0:5,0:21:13.24:0,13,105	0/0:5,0:20:21:0,21,183
chr10	56722764	.	GAC	G	1939.22	PASS	AB=0.858;AC=21;AF=0.389;AN=54;BaseQRankSum=0.880;DP=686;FS=35.759;HRun=0;HaplotypeScore=147.8346;InbreedingCoeff=0.1002;MQ=60.61;MQ0=19;MQRankSum=2.273;QD=5.49;ReadPosRankSum=3.942;VQSLOD=1.6726;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:37:11.04:0,11,135	0/1:12,0:12:7.95:8,0,108	./.	0/0:44,0:26:3.01:0,3,34	0/0:14,0:14:12.02:0,12,135	0/0:19,0:17:6.46:0,6,51	0/1:42,0:41:32.64:33,0,63	0/1:28,1:28:12.73:13,0,378	0/1:17,11:27:5.81:221,0,6	0/1:16,5:21:99:186,0,112	1/1:3,3:6:9.03:103,9,0	0/0:11,0:36:6.01:0,6,71	0/1:26,3:29:60.85:61,0,435	0/1:28,5:33:99:118,0,519	0/1:17,0:17:2.18:2,0,27	0/0:23,0:28:16.50:0,17,135	0/0:24,0:24:36.99:0,37,256	0/0:21,0:21:37.03:0,37,353	1/1:10,6:16:8.58:155,9,0	0/1:3,1:4:1.04:50,0,1	1/1:45,16:59:29.66:508,30,0	0/0:13,0:12:3.01:0,3,45	0/0:7,0:7:0:0,0,0	0/0:42,0:43:1.56:0,2,313	1/1:11,4:15:12.01:127,12,0	0/1:6,6:12:9.19:159,0,9	0/1:12,9:19:9.86:261,0,10	1/1:3,4:6:9.02:98,9,0
chr10	56722770	.	C	CAG	2883.17	PASS	AB=0.941;AC=21;AF=0.375;AN=56;BaseQRankSum=5.327;DP=672;FS=6.778;HRun=0;HaplotypeScore=146.9378;InbreedingCoeff=0.4919;MQ=53.28;MQ0=22;MQRankSum=1.871;QD=9.04;ReadPosRankSum=4.817;VQSLOD=2.4546;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:38:30.02:0,30,294	0/0:12,0:12:9.49:0,9,178	0/0:39,0:12:32.82:0,33,323	0/0:40,0:22:47.01:0,47,515	0/0:13,0:13:15.01:0,15,124	0/0:17,0:15:21.31:0,21,157	0/1:42,0:41:48.84:49,0,194	0/0:32,0:31:58.39:0,58,797	1/1:26,1:26:30.02:408,30,0	0/1:21,0:21:41.43:313,0,41	1/1:4,0:4:9.03:103,9,0	0/0:35,0:35:20.84:0,21,189	0/0:27,0:27:70.38:0,70,761	0/0:33,0:33:69.02:0,69,828	0/1:5,12:17:1.75:69,0,2	0/1:27,0:27:12.49:12,0,144	0/0:26,0:26:43.45:0,43,345	0/0:20,0:20:55.76:0,56,458	1/1:17,0:17:21.26:315,21,0	0/1:4,0:4:1.66:27,0,2	1/1:59,1:57:70.42:912,70,0	0/0:13,0:12:15:0,15,139	0/0:7,0:7:2.98:0,3,21	0/1:43,0:40:27.18:27,0,375	1/1:16,0:16:24:223,24,0	0/1:14,0:13:21.74:160,0,22	1/1:18,2:18:28.86:378,29,0	1/1:6,1:6:15.04:85,15,0
chr10	56722791	.	A	ACG	3627.86	PASS	AB=0.976;AC=31;AF=0.574;AN=54;BaseQRankSum=3.783;DP=641;FS=13.579;HRun=0;HaplotypeScore=160.4446;InbreedingCoeff=-0.1233;MQ=44.23;MQ0=19;MQRankSum=1.074;QD=6.74;ReadPosRankSum=-1.542;VQSLOD=2.5016;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:35:24.81:0,25,250	0/1:5,5:11:71.35:81,0,71	./.	0/0:14,0:2:5.93:0,6,51	0/0:17,0:17:29.84:0,30,258	0/1:13,0:11:15.52:16,0,41	0/1:45,0:44:21.60:284,0,22	0/1:27,0:24:90.11:90,0,361	1/1:26,0:25:26.22:340,26,0	0/1:23,0:23:9.84:294,0,10	1/1:6,0:6:9.01:103,9,0	0/1:35,0:35:54.96:55,0,56	0/1:20,0:20:20.84:21,0,489	0/0:29,0:29:62.70:0,63,718	0/1:22,0:21:9.44:123,0,9	0/1:26,0:26:57.79:58,0,97	0/1:27,0:27:99:117,0,164	0/1:23,0:23:99:107,0,239	1/1:20,0:19:24.25:228,24,0	0/1:5,0:5:1.45:26,0,1	1/1:70,0:65:50.05:679,50,0	0/1:14,0:13:30.44:40,0,30	1/1:10,0:10:11.85:94,12,0	0/1:42,0:39:99:103,0,258	1/1:19,0:19:20.98:199,21,0	0/1:26,0:24:7:235,0,7	1/1:21,0:19:25.29:306,25,0	1/1:7,0:6:7.64:28,8,0
chr10	56725922	.	CG	C	1223.23	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.853;DP=720;FS=4.852;HRun=4;HaplotypeScore=66.4394;InbreedingCoeff=0.9978;MQ=87.00;MQ0=0;MQRankSum=-1.742;QD=27.80;ReadPosRankSum=-3.278;VQSLOD=1.7146;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,153,2121	1/1:1,7:8:21.06:252,21,0	0/0:24,0:24:66.18:0,66,877	0/0:24,0:24:45.86:0,46,695	0/0:22,0:22:54.18:0,54,742	0/0:19,0:19:57.19:0,57,797	0/0:19,0:19:57.16:0,57,763	1/1:1,35:36:96.21:1092,96,0	0/0:25,0:25:75.23:0,75,1013	0/0:27,0:26:78.25:0,78,1076	0/0:13,0:13:39.13:0,39,544	0/0:28,0:28:84.27:0,84,1159	0/0:22,0:22:63.20:0,63,864	0/0:21,0:21:63.19:0,63,848	0/0:35,0:35:99:0,102,1403	0/0:33,0:33:93.31:0,93,1301	0/0:38,0:38:99:0,108,1491	0/0:28,0:28:81.20:0,81,1091	0/0:15,0:15:42.08:0,42,532	0/0:19,0:19:53.97:0,54,675	0/0:46,0:46:99:0,132,1796	0/0:21,0:21:63.06:0,63,819	0/0:18,0:18:51.10:0,51,689	0/0:30,0:30:90.30:0,90,1253	0/0:20,0:20:60.19:0,60,823	0/0:30,0:30:84.26:0,84,1129	0/0:28,0:27:75.20:0,75,1001	0/0:18,0:18:54.14:0,54,704
chr10	56726997	.	T	TAAA	11886.30	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-3.489;DP=573;FS=5.124;HRun=12;HaplotypeScore=80.7740;InbreedingCoeff=0.9303;MQ=63.52;MQ0=1;MQRankSum=-3.137;QD=26.47;ReadPosRankSum=-2.405;VQSLOD=3.6051;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:61.22:0,61,840	1/1:1,0:6:14.94:114,15,0	0/0:11,0:8:5.38:0,5,36	0/0:9,0:9:3.35:0,3,35	0/0:33,0:33:66:0,66,727	1/1:6,16:23:31.35:553,31,0	1/1:4,14:22:40.36:669,40,0	1/1:10,0:30:65.14:504,65,0	1/1:3,15:19:30.10:536,30,0	1/1:8,11:24:51.05:710,51,0	1/1:2,8:10:15.05:258,15,0	1/1:8,12:23:28.32:432,28,0	0/0:15,0:17:46.55:0,47,519	0/0:18,0:18:33.84:0,34,372	1/1:5,24:33:57.15:968,57,0	1/1:3,10:16:30.10:524,30,0	1/1:4,13:19:30.10:511,30,0	1/1:4,13:21:21.05:334,21,0	1/1:6,9:18:45.03:639,45,0	1/1:5,3:12:22.56:258,23,0	1/1:5,14:23:27.09:496,27,0	1/1:1,13:14:36.08:607,36,0	1/1:7,5:12:18.06:299,18,0	1/1:3,14:19:33.07:541,33,0	1/1:7,14:24:36.12:599,36,0	1/1:8,17:28:60.08:874,60,0	1/1:4,16:22:36.03:549,36,0	1/1:6,17:26:51.17:912,51,0
chr10	56727203	.	CT	C	8682.10	PASS	AB=0.929;AC=41;AF=0.732;AN=56;BaseQRankSum=12.138;DP=608;FS=10.867;HRun=10;HaplotypeScore=97.8813;InbreedingCoeff=0.8753;MQ=64.60;MQ0=5;MQRankSum=-1.313;QD=19.64;ReadPosRankSum=3.232;VQSLOD=4.8225;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,132,1424	0/0:9,0:9:24.06:0,24,262	0/0:19,0:12:0.92:0,1,130	0/1:24,1:14:8.96:9,0,156	0/0:25,0:26:42.97:0,43,677	1/1:0,8:8:24:208,24,0	1/1:2,19:21:29.77:259,30,0	0/0:42,0:41:63.54:0,64,879	1/1:0,19:19:53.99:468,54,0	1/1:1,14:15:41.94:363,42,0	1/1:3,15:17:38.97:338,39,0	1/1:1,18:19:50.99:442,51,0	0/0:11,0:11:32.96:0,33,334	0/0:12,0:12:23.28:0,23,239	1/1:4,21:24:47.95:416,48,0	1/1:0,28:28:68.98:598,69,0	1/1:0,27:27:74.99:651,75,0	1/1:1,18:19:50.98:443,51,0	1/1:10,12:22:35.87:311,36,0	1/1:1,20:21:59.97:520,60,0	1/1:2,16:18:41.99:364,42,0	1/1:2,13:15:38.91:332,39,0	1/1:0,20:20:50.99:442,51,0	1/1:2,25:27:59.99:520,60,0	1/1:2,16:18:42.46:365,42,0	1/1:4,24:28:38.77:565,39,0	1/1:2,25:27:71.89:623,72,0	1/1:4,17:20:50.97:442,51,0
chr10	56727601	.	T	TG	22128.72	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-15.442;DP=671;FS=1.072;HRun=0;HaplotypeScore=58.0451;InbreedingCoeff=0.9987;MQ=84.31;MQ0=0;MQRankSum=-5.153;QD=43.39;ReadPosRankSum=2.632;VQSLOD=5.4250;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,114,1593	1/1:0,9:9:21.07:335,21,0	0/0:21,0:21:60.19:0,60,812	0/0:20,0:20:54.13:0,54,732	0/0:26,0:26:75.23:0,75,1016	1/1:0,19:19:54.18:863,54,0	1/1:0,16:16:42.14:671,42,0	1/1:1,23:24:69.20:1035,69,0	1/1:0,16:16:42.14:671,42,0	1/1:0,29:29:87.30:1385,87,0	1/1:1,18:19:45.15:696,45,0	1/1:1,24:25:69.24:1103,69,0	0/0:22,0:22:66.21:0,66,907	0/0:33,0:33:99:0,99,1362	1/1:0,37:37:99:1676,105,0	1/1:0,26:26:72.25:1150,72,0	1/1:0,22:22:57.19:911,57,0	1/1:0,29:28:78.27:1241,78,0	1/1:2,21:23:63.19:961,63,0	1/1:0,27:27:75.26:1197,75,0	1/1:0,10:10:24.08:384,24,0	1/1:1,30:31:78.18:1215,78,0	1/1:0,20:20:54.18:863,54,0	1/1:0,26:26:72.25:1150,72,0	1/1:0,26:26:75.26:1199,75,0	1/1:0,30:30:90.30:1412,90,0	1/1:1,31:32:83.97:1341,84,0	1/1:0,14:14:42.14:671,42,0
chr10	56728233	.	GCTCGCT	G	3984.09	PASS	AB=1.000;AC=34;AF=0.607;AN=56;BaseQRankSum=-3.836;DP=432;FS=53.521;HRun=0;HaplotypeScore=108.7535;InbreedingCoeff=0.2524;MQ=67.46;MQ0=12;MQRankSum=-0.515;QD=12.81;ReadPosRankSum=-1.740;VQSLOD=0.5275;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:34.56:0,35,251	1/1:7,0:7:17.68:122,18,0	0/0:26,0:15:19.63:0,20,217	0/0:36,0:19:35.96:0,36,253	0/0:11,0:10:29.49:0,29,194	1/1:11,0:11:8.99:75,9,0	1/1:15,0:15:29.92:246,30,0	1/1:19,0:19:52.27:438,52,0	1/1:11,0:11:17.87:133,18,0	0/1:19,0:17:0.80:308,0,1	1/1:9,0:9:9.91:117,10,0	0/1:16,0:16:3.93:185,0,4	0/0:21,0:21:27.34:0,27,342	0/0:11,0:10:9.93:0,10,117	0/1:16,0:16:15.21:27,0,15	0/1:20,0:19:98.52:221,0,99	1/1:19,0:17:33.70:278,34,0	0/1:4,0:4:40.01:40,0,42	0/1:13,0:13:8.43:217,0,8	0/1:14,0:14:13.64:149,0,14	1/1:16,0:15:20.97:173,21,0	1/1:14,0:14:3.01:53,3,0	1/1:1,9:9:2.91:18,3,0	1/1:16,0:16:20.84:155,21,0	0/1:11,0:9:20.43:133,0,20	0/1:16,0:15:37.90:256,0,38	0/1:11,0:11:8.15:115,0,8	1/1:24,0:23:65.82:526,66,0
chr10	56728235	.	TCG	T	4459.63	PASS	AB=0.900;AC=45;AF=0.804;AN=56;BaseQRankSum=-1.028;DP=420;FS=26.204;HRun=0;HaplotypeScore=81.1323;InbreedingCoeff=0.7553;MQ=66.67;MQ0=13;MQRankSum=-1.897;QD=14.29;ReadPosRankSum=-0.689;VQSLOD=2.7485;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:34.56:0,35,251	1/1:7,0:7:12.02:112,12,0	0/0:26,0:15:19.63:0,20,217	0/0:35,0:18:33.95:0,34,249	0/0:12,0:11:29.49:0,29,194	1/1:11,0:11:8.99:75,9,0	1/1:14,0:14:29.92:246,30,0	1/1:19,0:19:52.16:439,52,0	1/1:10,0:10:17.87:133,18,0	1/1:19,0:17:44.62:370,45,0	1/1:8,0:8:9.51:117,10,0	1/1:16,0:16:22.38:187,22,0	0/0:19,0:19:27.13:0,27,246	0/1:8,1:8:33.23:33,0,59	1/1:2,13:15:6.77:37,7,0	1/1:19,1:19:21.04:277,21,0	1/1:18,0:16:36.72:297,37,0	1/1:4,0:4:9.72:67,10,0	1/1:12,0:12:17.01:235,17,0	1/1:13,0:13:27.23:257,27,0	1/1:15,0:14:20.97:173,21,0	1/1:1,13:14:2.94:18,3,0	1/1:10,0:9:2.77:18,3,0	1/1:16,0:16:20.84:155,21,0	1/1:10,0:8:20.99:178,21,0	1/1:16,0:15:41.38:331,41,0	1/1:11,1:11:12.69:182,13,0	1/1:24,0:23:65.82:526,66,0
chr10	56728481	.	AGTCTGTTCCTCCCAAC	A	25710.72	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=15.820;DP=546;FS=26.533;HRun=0;HaplotypeScore=226.2658;InbreedingCoeff=0.9673;MQ=86.14;MQ0=0;MQRankSum=-15.029;QD=81.62;ReadPosRankSum=6.697;VQSLOD=2.8224;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,154,10968	0/0:9,0:9:27.09:0,27,1834	0/0:27,0:27:81.05:0,81,5099	0/0:36,0:36:91.63:0,92,6162	0/0:21,0:21:63.22:0,63,4690	1/1:0,5:5:6.02:293,6,0	1/1:0,23:23:32.79:1609,33,0	0/0:35,0:35:99:0,105,6566	1/1:0,16:16:30.10:1418,30,0	1/1:0,18:18:54.06:2187,54,0	1/1:0,13:13:24.08:1066,24,0	1/1:0,24:24:30.10:1432,30,0	0/0:24,0:24:69.24:0,69,5328	0/0:28,0:28:84.29:0,84,6474	1/1:0,20:20:45.15:2196,45,0	1/1:0,19:19:27.09:1295,27,0	1/1:0,13:13:24.08:1172,24,0	1/1:0,14:14:30.07:1319,30,0	1/1:0,9:9:27.05:1057,27,0	1/1:0,15:15:30.10:1346,30,0	1/1:0,25:25:30.10:1412,30,0	1/1:0,9:10:15.05:658,15,0	1/1:0,12:12:18.06:778,18,0	1/1:0,26:26:31.05:1360,31,0	1/1:0,14:14:39.13:1853,39,0	1/1:0,14:14:38.55:1509,39,0	1/1:0,20:20:27.09:1313,27,0	1/1:0,5:5:9.03:440,9,0
chr10	56730824	.	AGTGTGTGTGTGTGT	A	3811.66	PASS	AB=0.892;AC=22;AF=0.423;AN=52;BaseQRankSum=6.086;DP=682;FS=0.597;HRun=0;HaplotypeScore=240.4168;InbreedingCoeff=0.7055;MQ=65.85;MQ0=12;MQRankSum=-4.088;QD=14.28;ReadPosRankSum=-2.385;VQSLOD=2.2337;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:27:33.09:0,33,1458	1/1:3,0:11:5.78:195,6,0	./.	./.	0/0:18,0:19:24.08:0,24,1141	0/0:13,0:24:12.04:0,12,425	0/0:24,0:25:22.89:0,23,854	0/0:31,0:30:0.33:0,0,6	1/1:10,10:22:21.07:711,21,0	0/1:29,11:40:30.04:362,0,30	1/1:15,0:15:2.68:11,3,0	0/0:18,0:28:33.11:0,33,1093	0/0:18,0:18:27.57:0,28,1188	0/0:19,0:19:24.55:0,25,1184	1/1:11,11:23:18.06:648,18,0	0/0:14,0:24:26.71:0,27,817	0/0:25,0:33:36.10:0,36,1205	0/0:14,0:17:18.06:0,18,843	0/1:15,0:14:3.30:48,0,3	1/1:12,7:19:8.64:286,9,0	1/1:36,0:36:9.74:107,10,0	0/0:18,0:21:44.27:0,44,1572	0/0:11,0:17:21.07:0,21,541	0/0:23,0:45:48.16:0,48,1986	1/1:9,8:19:15.05:432,15,0	1/1:17,18:35:23.10:693,23,0	1/1:10,8:18:2.43:203,2,0	1/1:7,7:13:3.01:117,3,0
chr10	56732709	.	AGG	A	2636.59	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-1.937;DP=236;FS=0.000;HRun=2;HaplotypeScore=59.3215;InbreedingCoeff=0.4319;MQ=41.48;MQ0=6;MQRankSum=-3.789;QD=11.82;ReadPosRankSum=1.077;VQSLOD=0.5567;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,25:20:36.12:479,36,0	1/1:3,3:4:11.03:108,11,0	0/0:8,0:3:3.58:0,4,36	0/0:5,0:4:8.20:0,8,77	1/1:0,16:15:26.91:252,27,0	1/1:3,3:4:6.02:78,6,0	1/1:4,0:3:6.61:31,7,0	1/1:11,14:19:38.34:366,38,0	1/1:3,0:1:2.04:6,2,0	1/1:10,0:8:15.66:94,16,0	1/1:5,2:5:9.38:72,9,0	1/1:4,1:4:3.01:39,3,0	1/1:0,8:8:12:134,12,0	1/1:0,9:8:6.02:78,6,0	1/1:5,0:4:5.19:13,5,0	1/1:9,1:8:16.35:84,16,0	1/1:5,3:6:7.63:51,8,0	1/1:6,1:6:15.60:95,16,0	1/1:2,3:3:8.06:91,8,0	1/1:5,2:5:10.80:99,11,0	1/1:2,0:1:3.01:35,3,0	1/1:4,0:4:6.36:42,6,0	1/1:6,3:6:9.65:87,10,0	1/1:1,1:2:1.82:5,2,0	1/1:3,1:3:1.82:5,2,0	1/1:10,2:8:16.96:124,17,0	1/1:9,4:10:23.56:202,24,0	1/1:10,1:10:15.42:79,15,0
chr10	56733052	.	CA	C	9911.47	PASS	AB=1.000;AC=41;AF=0.732;AN=56;BaseQRankSum=8.805;DP=591;FS=10.354;HRun=8;HaplotypeScore=67.2589;InbreedingCoeff=0.9307;MQ=76.61;MQ0=0;MQRankSum=-0.100;QD=23.05;ReadPosRankSum=5.084;VQSLOD=4.9128;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:87.25:0,87,1038	0/0:7,0:7:21.06:0,21,254	0/1:21,0:18:4.75:5,0,214	0/0:17,1:16:20.41:0,20,266	0/0:25,0:25:63.18:0,63,742	1/1:2,18:20:42.07:406,42,0	1/1:0,21:21:54.09:522,54,0	0/0:41,0:41:99:0,111,1325	1/1:2,15:17:36.06:348,36,0	1/1:1,12:13:36.06:348,36,0	1/1:0,18:18:48.08:463,48,0	1/1:0,25:24:54.08:521,54,0	0/0:18,0:18:48.14:0,48,570	0/0:19,0:19:57.17:0,57,688	1/1:2,25:27:69.10:666,69,0	1/1:4,29:33:72.11:695,72,0	1/1:1,13:14:39.06:377,39,0	1/1:2,29:31:78.12:753,78,0	1/1:2,9:11:27.04:261,27,0	1/1:2,16:18:42.06:405,42,0	1/1:1,19:20:45.07:435,45,0	1/1:2,14:16:42.06:404,42,0	1/1:1,18:19:47.93:463,48,0	1/1:0,24:24:72.12:695,72,0	1/1:1,14:15:36.05:348,36,0	1/1:0,24:24:69.11:666,69,0	1/1:1,25:26:69.11:666,69,0	1/1:0,17:17:48.08:464,48,0
chr10	56733300	.	AC	A	9200.07	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=8.797;DP=545;FS=3.058;HRun=3;HaplotypeScore=94.8036;InbreedingCoeff=0.9411;MQ=74.65;MQ0=9;MQRankSum=-1.484;QD=24.87;ReadPosRankSum=2.160;VQSLOD=4.3805;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:63.13:0,63,787	1/1:0,0:9:17.91:58,18,0	0/0:42,1:22:29.81:0,30,401	0/0:51,0:25:42.54:0,43,415	0/0:30,0:30:87.17:0,87,1063	1/1:4,7:11:27.08:321,27,0	1/1:2,9:12:5.08:76,5,0	1/1:4,0:24:53.49:228,53,0	1/1:5,6:11:27.02:300,27,0	1/1:7,10:17:41.82:438,42,0	1/1:6,14:20:53.15:577,53,0	1/1:0,15:14:29.89:368,30,0	0/0:15,1:16:5.24:0,5,453	0/0:10,0:10:30.08:0,30,384	1/1:4,12:17:44.14:467,44,0	1/1:4,15:19:54.02:627,54,0	1/1:9,17:27:47.78:703,48,0	1/1:0,17:17:36.11:442,36,0	1/1:5,8:12:11.58:309,12,0	1/1:7,13:21:53.12:556,53,0	1/1:5,6:12:35.10:345,35,0	1/1:2,19:21:51.63:606,52,0	1/1:3,9:13:32.88:348,33,0	1/1:1,11:12:30.05:369,30,0	1/1:4,10:15:38.92:423,39,0	1/1:7,18:26:71.77:762,72,0	1/1:6,11:17:47.94:509,48,0	1/1:6,12:17:30.09:368,30,0
chr10	56733400	.	C	CT	12785.36	PASS	AB=1.000;AC=46;AF=0.821;AN=56;BaseQRankSum=-10.244;DP=637;FS=1.890;HRun=7;HaplotypeScore=67.0400;InbreedingCoeff=0.7669;MQ=73.31;MQ0=2;MQRankSum=-0.223;QD=23.59;ReadPosRankSum=2.521;VQSLOD=5.2103;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:59.68:0,60,733	1/1:2,10:12:33.05:379,33,0	0/1:44,0:26:25.36:25,0,318	0/1:35,0:20:9.95:10,0,117	0/0:25,0:25:45.09:0,45,488	1/1:3,16:20:36.11:434,36,0	1/1:2,14:16:36.11:434,36,0	1/1:9,17:27:54.59:614,55,0	1/1:2,15:17:42.13:506,42,0	1/1:3,23:26:75.18:869,75,0	1/1:6,19:25:63.19:759,63,0	1/1:0,20:21:54.03:630,54,0	0/0:25,0:25:69.09:0,69,660	0/0:16,0:16:33.02:0,33,308	1/1:4,22:26:51.16:614,51,0	1/1:4,8:12:18.06:217,18,0	1/1:5,36:41:87.27:1048,87,0	1/1:2,19:20:57.17:686,57,0	1/1:3,17:19:27.25:573,27,0	1/1:7,10:17:48.05:515,48,0	1/1:2,14:17:36.11:434,36,0	1/1:4,15:18:51.15:605,51,0	1/1:3,25:28:67.27:783,67,0	1/1:2,24:26:40.26:767,40,0	1/1:3,16:19:38.91:446,39,0	1/1:6,16:22:60.18:713,60,0	1/1:3,17:20:39.12:471,39,0	1/1:2,8:10:21.06:253,21,0
chr10	56734841	.	A	AT	14446.80	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-10.629;DP=431;FS=3.049;HRun=0;HaplotypeScore=45.3481;InbreedingCoeff=0.9732;MQ=89.54;MQ0=0;MQRankSum=-5.943;QD=42.87;ReadPosRankSum=0.877;VQSLOD=5.1519;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:57.19:0,57,784	1/1:0,4:4:6.02:94,6,0	0/0:22,0:21:60.06:0,60,739	0/0:17,0:17:18.39:0,18,319	0/0:14,0:14:42.14:0,42,577	1/1:1,12:13:36.12:573,36,0	1/1:1,20:21:48.16:764,48,0	1/1:0,24:24:72.17:1026,72,0	1/1:2,10:13:33.11:517,33,0	1/1:0,12:13:39.11:583,39,0	1/1:1,13:16:42.14:638,42,0	1/1:1,18:19:54.18:841,54,0	0/0:10,0:10:30.09:0,30,400	0/0:12,0:12:33.10:0,33,442	1/1:0,20:20:57.19:908,57,0	1/1:1,17:18:51.17:812,51,0	1/1:1,14:15:42.14:668,42,0	1/1:0,19:19:57.19:899,57,0	1/1:1,9:10:27.07:387,27,0	1/1:1,6:7:18.06:276,18,0	1/1:0,27:27:72.25:1140,72,0	1/1:0,11:11:27.09:424,27,0	1/1:0,8:8:24.08:377,24,0	1/1:2,19:21:57.19:895,57,0	1/1:0,7:7:18.06:286,18,0	1/1:0,16:16:48.16:765,48,0	1/1:1,13:14:36.12:572,36,0	1/1:0,21:21:63.21:1002,63,0
chr10	56735180	.	GCT	G	170.11	PASS	AB=0.988;AC=18;AF=0.321;AN=56;BaseQRankSum=9.372;DP=425;FS=22.666;HRun=0;HaplotypeScore=67.9520;InbreedingCoeff=-0.1761;MQ=62.79;MQ0=7;MQRankSum=-0.475;QD=0.73;ReadPosRankSum=8.242;VQSLOD=-0.3229;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:24:51.02:0,51,735	1/1:5,0:4:1.61:5,2,0	0/0:16,0:10:23.98:0,24,292	0/0:9,0:6:11.14:0,11,158	0/0:21,0:21:52.40:0,52,718	0/1:14,0:14:7.54:8,0,93	0/1:12,0:12:2.67:3,0,117	0/1:34,0:31:11.80:12,0,316	0/1:10,0:10:5.15:5,0,92	0/0:14,0:14:17.23:0,17,165	0/1:16,1:17:47.59:48,0,52	0/1:14,1:14:39.37:39,0,150	0/0:6,0:6:11.96:0,12,125	0/0:12,0:12:29.47:0,29,355	0/1:17,0:17:23.54:24,0,96	0/1:7,0:7:6.49:6,0,17	0/1:22,0:22:39.25:39,0,68	0/1:17,0:14:2.24:2,0,98	0/0:28,0:26:1.94:0,2,198	0/0:10,0:10:13.89:0,14,91	0/0:15,0:15:22.85:0,23,209	0/0:5,0:4:8.92:0,9,67	0/1:5,0:5:10.81:11,0,38	1/1:8,0:8:8.05:23,8,0	0/1:9,0:8:15.24:18,0,15	0/0:28,1:28:22.42:0,22,250	0/1:22,0:21:41.30:41,0,158	0/1:19,1:19:29.53:36,0,30
chr10	56735181	.	CTT	C	4029.22	PASS	AB=0.588;AC=41;AF=0.732;AN=56;BaseQRankSum=-0.611;DP=436;FS=10.389;HRun=16;HaplotypeScore=56.2981;InbreedingCoeff=0.8000;MQ=61.84;MQ0=14;MQRankSum=0.859;QD=12.21;ReadPosRankSum=5.004;VQSLOD=1.6567;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:28:47.90:0,48,538	1/1:0,5:4:11.99:100,12,0	0/0:16,0:10:17.99:0,18,170	0/0:9,0:6:4.55:0,5,30	0/0:19,0:23:44.44:0,44,435	1/1:5,8:13:17.84:150,18,0	1/1:5,6:12:8.86:117,9,0	1/1:13,19:30:22.35:309,22,0	1/1:5,5:10:14.90:125,15,0	1/1:6,8:14:4.61:178,5,0	1/1:4,12:16:25.56:217,26,0	1/1:8,6:13:14.87:125,15,0	0/0:7,0:8:11.35:0,11,106	0/0:12,0:13:23.38:0,23,255	1/1:8,9:17:29.85:251,30,0	1/1:1,6:7:14.74:125,15,0	1/1:8,14:23:24.38:346,24,0	1/1:7,9:14:17.89:192,18,0	1/1:11,14:26:31.71:290,32,0	0/1:3,5:10:0.20:84,0,0	1/1:9,6:14:14.79:125,15,0	0/0:4,1:4:2.97:0,3,20	1/1:1,3:5:2.93:67,3,0	1/1:0,7:8:20.72:162,21,0	1/1:3,7:8:17.97:151,18,0	1/1:13,15:28:30.79:342,31,0	1/1:8,10:20:17.55:220,18,0	1/1:6,15:19:41.78:351,42,0
chr10	56735801	.	TGTC	T	8530.92	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=13.089;DP=552;FS=4.073;HRun=0;HaplotypeScore=85.5832;InbreedingCoeff=0.9946;MQ=86.20;MQ0=0;MQRankSum=-4.658;QD=43.75;ReadPosRankSum=3.714;VQSLOD=6.3685;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,111,2558	0/0:4,0:4:12.04:0,12,276	0/0:23,0:23:62.65:0,63,1319	0/0:24,0:24:67.09:0,67,1317	0/0:12,0:12:36.12:0,36,830	1/1:0,10:10:24.08:409,24,0	1/1:0,33:34:99:1660,99,0	0/0:29,0:29:78.27:0,78,1784	0/0:12,0:12:33.11:0,33,759	0/0:16,0:16:48.15:0,48,1024	0/0:12,0:12:36.12:0,36,826	1/1:0,16:16:39.13:665,39,0	0/0:22,0:22:63.20:0,63,1402	0/0:22,0:22:66.23:0,66,1513	0/0:18,0:18:54.17:0,54,1198	1/1:0,18:18:48.16:806,48,0	1/1:1,19:20:48.16:818,48,0	1/1:0,28:28:75.26:1279,75,0	0/0:13,0:13:39.13:0,39,899	0/0:14,0:14:42.14:0,42,967	0/0:39,0:39:99:0,111,2508	1/1:1,15:16:42.14:702,42,0	1/1:1,18:19:48.16:761,48,0	1/1:2,32:34:84.29:1432,84,0	0/0:11,0:11:33.11:0,33,755	0/0:27,0:27:78.26:0,78,1731	0/0:12,0:12:36.12:0,36,828	0/0:10,0:10:30.10:0,30,691
chr10	56736733	.	G	GA	6679.55	PASS	AB=1.000;AC=46;AF=0.821;AN=56;BaseQRankSum=-0.254;DP=543;FS=4.716;HRun=10;HaplotypeScore=69.1033;InbreedingCoeff=0.7645;MQ=62.61;MQ0=3;MQRankSum=-1.126;QD=14.91;ReadPosRankSum=1.827;VQSLOD=5.3464;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:72.52:0,73,621	1/1:2,0:6:13.80:66,14,0	0/1:11,0:6:3.29:3,0,29	0/1:11,0:7:18.58:19,0,58	0/0:18,0:19:17.74:0,18,221	1/1:4,17:21:18.58:392,19,0	1/1:8,29:38:49.53:468,50,0	1/1:12,1:33:55.52:281,56,0	1/1:1,15:16:27.02:273,27,0	1/1:5,15:20:45.40:448,45,0	1/1:4,7:13:29.62:246,30,0	1/1:4,17:21:20.81:224,21,0	0/0:18,0:18:32.50:0,32,328	0/0:13,0:13:14.33:0,14,204	1/1:6,15:21:27.54:287,28,0	1/1:2,17:20:29.91:302,30,0	1/1:3,32:35:75.19:799,75,0	1/1:6,16:24:32.29:371,32,0	1/1:9,6:14:31.51:300,32,0	1/1:3,11:13:32.07:308,32,0	1/1:3,11:14:12.03:126,12,0	1/1:0,12:12:29.95:291,30,0	1/1:2,8:10:15.04:160,15,0	1/1:4,21:25:36.09:383,36,0	1/1:5,11:16:16.42:150,16,0	1/1:5,14:19:24.44:347,24,0	1/1:8,15:24:35.58:354,36,0	1/1:2,5:8:8.86:78,9,0
chr10	56737386	.	AACAG	A	1265.23	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.331;DP=831;FS=11.495;HRun=0;HaplotypeScore=145.4435;InbreedingCoeff=0.9987;MQ=76.21;MQ0=0;MQRankSum=2.329;QD=26.36;ReadPosRankSum=-3.259;VQSLOD=1.9877;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,120,2571	1/1:2,8:10:24:387,24,0	0/0:33,0:31:59.08:0,59,984	0/0:47,0:44:56.10:0,56,1110	0/0:19,0:19:48.12:0,48,997	0/0:15,0:15:33.09:0,33,681	0/0:30,0:30:84.16:0,84,1595	1/1:10,28:38:81.07:999,81,0	0/0:33,0:33:84.17:0,84,1686	0/0:24,0:24:57.16:0,57,1326	0/0:20,0:20:57.18:0,57,1308	0/0:34,0:34:87.23:0,87,1957	0/0:22,0:22:51.13:0,51,1123	0/0:29,0:29:75.18:0,75,1598	0/0:37,0:37:93.29:0,93,2228	0/0:50,0:50:99:0,111,2567	0/0:38,0:38:72.21:0,72,1715	0/0:19,0:19:45.08:0,45,976	0/0:23,0:23:51.16:0,51,1133	0/0:33,0:33:87.24:0,87,1970	0/0:59,0:59:99:0,129,2753	0/0:18,0:18:42.12:0,42,916	0/0:21,0:21:51.04:0,51,1115	0/0:49,0:49:99:0,129,2565	0/0:18,0:18:42.13:0,42,974	0/0:19,0:19:54.15:0,54,1109	0/0:29,0:29:75.12:0,75,1681	0/0:17,0:17:51.18:0,51,1286
chr10	56738312	.	A	AAT	4715.88	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-12.300;DP=485;FS=0.892;HRun=0;HaplotypeScore=59.8447;InbreedingCoeff=0.9639;MQ=74.11;MQ0=0;MQRankSum=-0.619;QD=38.97;ReadPosRankSum=2.294;VQSLOD=6.8862;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:69.22:0,69,888	0/0:6,0:5:12.04:0,12,154	0/0:10,0:10:16.04:0,16,142	0/0:12,0:11:16.44:0,16,162	0/0:25,0:25:69.21:0,69,873	1/1:4,23:27:66.23:1114,66,0	1/1:2,5:8:15.05:253,15,0	0/0:40,0:40:90.28:0,90,1146	0/0:13,0:13:33.11:0,33,425	0/0:25,0:25:63.20:0,63,810	0/0:16,0:16:39.13:0,39,501	1/1:2,9:11:27.09:435,27,0	0/0:16,0:16:42.14:0,42,541	0/0:12,0:12:33.11:0,33,425	0/0:19,0:19:48.16:0,48,618	1/1:3,9:12:24.55:406,25,0	1/1:3,27:30:78.27:1308,78,0	1/1:5,8:13:21.07:354,21,0	0/0:20,0:20:57.17:0,57,720	0/0:26,0:26:63.20:0,63,799	0/0:2,0:2:6.02:0,6,77	1/1:1,5:6:15.05:239,15,0	1/1:0,10:10:24.08:405,24,0	1/1:0,4:4:12.04:202,12,0	0/0:19,0:19:54.18:0,54,695	0/0:27,0:27:66.21:0,66,847	0/0:23,0:23:63.19:0,63,797	0/0:29,0:29:81.26:0,81,1042
chr10	56738573	.	T	TTGTGTG	6676.33	PASS	AB=0.724;AC=25;AF=0.446;AN=56;BaseQRankSum=-6.595;DP=639;FS=20.312;HRun=0;HaplotypeScore=148.9541;InbreedingCoeff=0.7904;MQ=62.99;MQ0=11;MQRankSum=-7.735;QD=22.63;ReadPosRankSum=-4.598;VQSLOD=2.1589;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:39:66.17:0,66,1189	0/0:9,0:8:0:0,0,0	0/0:35,0:17:4.99:0,5,67	0/0:32,0:18:8.09:0,8,94	0/0:20,0:23:54.17:0,54,1050	0/0:10,0:21:33.10:0,33,448	0/0:13,0:26:39.12:0,39,524	1/1:38,0:34:40.59:514,41,0	1/1:10,8:21:12.04:308,12,0	1/1:8,9:22:45.15:1051,45,0	1/1:4,6:12:1.37:196,1,0	0/0:9,0:24:35.98:0,36,476	0/0:15,0:15:30.10:0,30,604	0/0:16,0:16:33.11:0,33,667	1/1:7,19:29:38.33:1040,38,0	0/0:11,0:25:13.43:0,13,82	0/0:8,0:22:2.85:0,3,129	0/1:13,0:21:81.77:82,0,115	1/1:13,0:13:15.05:285,15,0	1/1:5,9:15:6.02:130,6,0	1/1:34,0:32:14.93:271,15,0	0/0:6,0:17:27.09:0,27,364	0/0:1,0:11:23.76:0,24,326	0/0:10,0:27:44.67:0,45,563	1/1:11,10:22:14.93:423,15,0	1/1:14,12:33:53.97:1214,54,0	1/1:11,10:23:26.92:791,27,0	1/1:1,5:10:15.05:371,15,0
chr10	56738602	.	T	TG	696.91	PASS	AB=0.940;AC=11;AF=0.196;AN=56;BaseQRankSum=10.525;DP=590;FS=2.167;HRun=1;HaplotypeScore=107.5120;InbreedingCoeff=-0.2566;MQ=61.43;MQ0=8;MQRankSum=-8.696;QD=3.11;ReadPosRankSum=0.871;VQSLOD=0.0365;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,2:41:99:0,108,1403	0/0:4,5:8:6.01:0,6,80	0/0:21,0:6:18.05:0,18,212	0/0:25,0:13:29.78:0,30,332	0/0:27,0:27:78.18:0,78,1019	0/0:16,0:15:41.76:0,42,355	0/0:25,1:26:46.36:0,46,635	0/1:11,13:21:99:353,0,339	0/1:17,0:17:25.65:26,0,183	0/1:21,0:21:45.73:46,0,285	0/1:14,0:14:25.47:25,0,224	0/0:30,0:29:68.82:0,69,697	0/0:17,0:17:48.16:0,48,659	0/0:19,0:19:54.14:0,54,722	0/1:26,0:26:99:106,0,272	0/0:22,0:22:14.99:0,15,308	0/0:26,0:27:6.44:0,6,368	0/1:17,1:18:42.51:43,0,276	0/0:8,0:8:24.05:0,24,300	0/1:15,0:15:47.28:47,0,221	0/1:26,2:29:22.78:23,0,424	0/0:14,0:14:32.77:0,33,269	0/0:14,0:14:32.84:0,33,291	0/0:30,0:30:77.74:0,78,748	0/1:16,0:15:62.31:62,0,146	0/1:17,0:19:82.31:82,0,185	0/1:23,1:24:31.55:32,0,354	0/0:20,0:20:19.72:0,20,389
chr10	56740009	.	AC	A	16183.82	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=14.521;DP=753;FS=11.106;HRun=1;HaplotypeScore=121.6985;InbreedingCoeff=0.9937;MQ=63.83;MQ0=1;MQRankSum=0.656;QD=29.91;ReadPosRankSum=4.617;VQSLOD=3.4332;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,105,1379	1/1:2,4:6:12.04:140,12,0	0/0:30,0:18:50.76:0,51,656	0/0:45,0:33:69.32:0,69,906	0/0:36,0:36:99:0,105,1542	1/1:2,19:21:51.15:594,51,0	1/1:1,16:17:44.74:481,45,0	1/1:4,28:32:84.25:975,84,0	1/1:3,28:31:78.19:894,78,0	1/1:1,22:23:66.19:766,66,0	1/1:3,15:18:48.13:551,48,0	1/1:1,27:28:75.22:873,75,0	0/0:36,0:36:99:0,107,1543	0/0:30,0:30:90.24:0,90,1253	1/1:4,39:43:99:1221,105,0	1/1:1,36:37:96.29:1119,96,0	1/1:3,26:29:64.04:796,64,0	1/1:4,10:14:33.10:384,33,0	1/1:1,18:18:54.10:584,54,0	1/1:1,25:26:75.22:870,75,0	1/1:0,28:28:66.20:768,66,0	1/1:3,26:29:72.21:839,72,0	1/1:0,21:21:54.01:629,54,0	1/1:1,27:28:72.21:839,72,0	1/1:0,19:19:48.14:558,48,0	1/1:1,30:31:90.27:1047,90,0	1/1:0,27:27:66.20:767,66,0	1/1:0,14:14:42.12:488,42,0
chr10	56742331	.	TA	T	2990.50	PASS	AB=0.760;AC=42;AF=0.750;AN=56;BaseQRankSum=4.602;DP=703;FS=7.748;HRun=16;HaplotypeScore=83.0957;InbreedingCoeff=0.4621;MQ=48.06;MQ0=59;MQRankSum=-0.953;QD=4.90;ReadPosRankSum=4.652;VQSLOD=1.9103;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:26,2:28:15.99:16,0,281	1/1:6,5:11:8.48:84,8,0	0/0:21,0:5:4.83:0,5,33	0/0:14,0:3:6.63:0,7,39	0/0:27,2:29:15.14:0,15,313	1/1:4,0:12:16.30:47,16,0	1/1:3,1:10:12.33:44,12,0	1/1:16,13:20:7.57:171,8,0	1/1:9,16:20:9.41:141,9,0	1/1:21,26:44:33.77:367,34,0	1/1:11,25:37:16.10:220,16,0	1/1:5,1:11:18.95:66,19,0	0/0:13,0:12:26.42:0,26,201	0/0:12,1:15:4.83:0,5,188	1/1:15,28:37:7.40:182,7,0	1/1:2,0:15:24.44:70,24,0	1/1:14,0:29:35.84:103,36,0	1/1:6,0:16:22.39:64,22,0	1/1:14,18:23:32.77:270,33,0	0/1:27,7:32:17.80:168,0,18	0/1:8,7:12:9.93:57,0,10	1/1:4,0:13:10.17:29,10,0	1/1:4,0:17:16.03:46,16,0	1/1:5,0:17:0.41:40,0,0	1/1:6,19:24:14.32:180,14,0	1/1:18,27:39:69.68:390,70,0	1/1:14,25:34:22.95:237,23,0	0/1:11,14:23:9.39:167,0,9
chr10	56742414	.	C	CA	459.86	PASS	AB=0.965;AC=19;AF=0.339;AN=56;BaseQRankSum=10.685;DP=601;FS=10.036;HRun=10;HaplotypeScore=140.8152;InbreedingCoeff=0.3795;MQ=54.00;MQ0=34;MQRankSum=-8.879;QD=1.65;ReadPosRankSum=2.053;VQSLOD=-0.1577;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:54.33:0,54,436	0/1:9,2:11:39.96:40,0,129	0/0:59,0:17:13.08:0,13,88	0/0:42,0:11:11.61:0,12,88	0/0:23,0:22:15.80:0,16,336	0/0:11,0:10:14.98:0,15,123	0/0:8,0:9:20.02:0,20,154	0/0:23,0:23:49.45:0,49,404	1/1:19,0:13:6.61:29,7,0	0/1:40,0:34:3.97:57,0,4	1/1:23,1:19:1.98:103,2,0	0/0:18,0:16:38.94:0,39,320	0/1:13,1:14:3.07:3,0,164	0/1:7,0:8:0.73:1,0,119	1/1:31,0:20:6.80:83,7,0	0/0:24,1:22:18.94:0,19,357	0/0:26,0:24:65.86:0,66,533	0/0:15,0:14:35.89:0,36,286	0/1:18,0:10:10.89:19,0,11	0/1:31,1:28:39.16:88,0,39	0/0:6,0:3:1.97:0,2,16	0/0:8,0:7:17.98:0,18,148	0/0:18,0:17:29.74:0,30,246	0/0:10,0:9:11.98:0,12,98	0/1:24,0:22:30.56:31,0,48	1/1:29,0:17:5.63:81,6,0	1/1:15,0:14:14.10:56,14,0	1/1:13,0:13:8.45:40,8,0
chr10	56742415	.	A	AAACAAAC	6028.74	PASS	AB=0.927;AC=17;AF=0.304;AN=56;BaseQRankSum=6.422;DP=600;FS=10.258;HRun=0;HaplotypeScore=173.4817;InbreedingCoeff=0.5554;MQ=53.82;MQ0=34;MQRankSum=-8.906;QD=24.11;ReadPosRankSum=1.151;VQSLOD=4.0366;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:66:0,66,1395	0/0:11,0:11:30.08:0,30,617	0/0:58,0:17:28.92:0,29,393	0/0:46,0:13:17.27:0,17,260	0/0:22,0:21:63.19:0,63,1339	0/0:11,0:10:15.05:0,15,366	0/0:9,0:9:21.07:0,21,514	0/0:24,0:22:60.21:0,60,1493	1/1:14,5:13:16.14:440,16,0	0/1:28,7:30:80.37:780,0,80	1/1:22,2:19:6.98:574,7,0	0/0:18,0:16:42.10:0,42,1045	0/0:15,0:14:33.09:0,33,657	0/0:8,0:8:22.32:0,22,474	1/1:24,7:20:18.96:874,19,0	0/0:24,0:21:57.14:0,57,1268	0/0:27,0:25:69.23:0,69,1628	0/0:15,0:14:42.13:0,42,984	0/1:17,1:10:37.38:164,0,37	0/1:30,2:28:99:525,0,159	0/1:6,0:3:9.06:9,0,36	0/0:8,0:7:21.07:0,21,524	0/0:18,0:17:35.77:0,36,856	0/0:10,0:9:15.01:0,15,331	0/1:23,2:23:57.38:521,0,57	1/1:19,11:18:18.37:976,18,0	1/1:10,6:14:23.72:630,24,0	1/1:10,3:13:21.02:537,21,0
chr10	56742417	.	A	AC	1332.57	PASS	AB=0.946;AC=11;AF=0.196;AN=56;BaseQRankSum=7.798;DP=602;FS=7.653;HRun=0;HaplotypeScore=136.4510;InbreedingCoeff=0.0953;MQ=54.64;MQ0=35;MQRankSum=-7.266;QD=5.58;ReadPosRankSum=3.448;VQSLOD=3.0064;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:65.94:0,66,834	0/0:11,0:11:11.62:0,12,291	0/0:63,0:18:20.41:0,20,216	0/0:46,0:13:22.07:0,22,178	0/0:22,0:21:56.98:0,57,755	0/0:10,0:10:15.05:0,15,209	0/0:9,0:9:21.03:0,21,268	0/0:24,0:21:60.10:0,60,778	0/1:14,0:11:2.27:87,0,2	0/1:33,1:30:2.86:337,0,3	0/1:21,1:17:51.80:98,0,52	0/0:18,0:16:42.10:0,42,563	0/0:15,0:14:24.74:0,25,382	0/0:8,0:8:22.27:0,22,263	0/1:25,1:20:30.08:126,0,30	0/0:24,0:21:45.82:0,46,701	0/0:29,0:27:78.17:0,78,1007	0/0:15,0:14:42.10:0,42,544	0/1:15,1:10:66.86:80,0,67	0/1:25,5:28:99:197,0,150	0/0:6,1:4:5.64:0,6,53	0/0:8,0:7:21.06:0,21,278	0/0:18,0:17:41.99:0,42,516	0/0:10,0:9:17.97:0,18,207	0/1:21,5:24:99:201,0,158	0/1:25,1:18:34.96:174,0,35	1/1:16,0:15:4.17:96,4,0	0/1:12,0:12:3.10:83,0,3
chr10	56742423	.	AACC	A	1330.59	PASS	AB=0.921;AC=17;AF=0.304;AN=56;BaseQRankSum=12.095;DP=580;FS=1.520;HRun=0;HaplotypeScore=144.9580;InbreedingCoeff=0.6282;MQ=54.26;MQ0=39;MQRankSum=-9.472;QD=6.31;ReadPosRankSum=4.699;VQSLOD=2.7399;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:34.03:0,34,1122	0/0:9,0:9:9.23:0,9,269	0/0:65,0:16:10.83:0,11,124	0/0:54,0:14:9.81:0,10,214	0/0:20,0:19:53.38:0,53,1045	0/0:13,0:12:20.96:0,21,298	0/0:9,0:9:21.03:0,21,315	0/0:23,0:19:50.53:0,51,709	1/1:13,0:8:6.49:52,6,0	1/1:27,5:26:25.45:378,25,0	1/1:19,1:18:8.91:160,9,0	0/0:18,0:16:42.11:0,42,673	0/0:14,0:13:20.84:0,21,555	0/0:9,0:9:15.09:0,15,407	1/1:27,1:17:6.47:141,6,0	0/0:23,0:21:59.43:0,59,827	0/0:32,0:30:81.10:0,81,1161	0/0:15,0:14:39.02:0,39,562	0/1:13,2:9:14.61:127,0,15	1/1:28,2:26:1.16:256,1,0	0/0:6,1:4:6.75:0,7,44	0/0:6,0:6:18.05:0,18,278	0/0:16,0:16:32.68:0,33,523	0/0:9,0:8:15.03:0,15,216	0/1:21,2:21:42.17:159,0,42	1/1:26,1:15:8.44:147,8,0	1/1:12,0:10:16.55:76,17,0	0/1:8,0:7:5.79:15,0,6
chr10	56742424	.	AC	A	1134.88	PASS	AB=0.910;AC=20;AF=0.357;AN=56;BaseQRankSum=11.703;DP=574;FS=8.471;HRun=2;HaplotypeScore=132.0147;InbreedingCoeff=0.6674;MQ=53.51;MQ0=38;MQRankSum=-9.120;QD=5.16;ReadPosRankSum=2.444;VQSLOD=0.3501;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:26:35.25:0,35,732	0/0:9,0:9:24.02:0,24,286	0/0:62,0:15:17.88:0,18,156	0/0:51,1:14:10.79:0,11,156	0/0:19,0:18:54.08:0,54,675	0/0:14,0:13:21.02:0,21,251	0/0:9,0:9:13.28:0,13,231	0/0:23,0:18:48.96:0,49,554	1/1:11,1:8:10.09:73,10,0	1/1:27,1:25:15.66:114,16,0	1/1:16,6:18:17.05:245,17,0	0/0:18,0:16:41.92:0,42,522	0/0:14,0:13:28.59:0,29,334	0/1:9,0:9:13.98:14,0,203	1/1:23,4:16:17.46:166,17,0	0/0:23,0:21:60.13:0,60,727	0/0:32,0:30:78.10:0,78,948	0/0:15,0:14:33.09:0,33,428	1/1:10,6:9:7.07:80,7,0	0/1:24,4:25:28.33:181,0,28	0/1:6,1:4:4.02:33,0,4	0/0:6,0:6:18.05:0,18,225	0/0:17,0:17:38.83:0,39,441	0/0:10,0:9:14.96:0,15,176	0/1:20,3:21:38.51:117,0,39	1/1:24,3:15:15.24:151,15,0	1/1:12,0:10:16.96:80,17,0	1/1:7,1:7:13.76:82,14,0
chr10	56742428	.	ACC	A	1269.10	PASS	AB=0.953;AC=12;AF=0.214;AN=56;BaseQRankSum=10.744;DP=555;FS=9.085;HRun=2;HaplotypeScore=135.2414;InbreedingCoeff=0.0845;MQ=52.89;MQ0=42;MQRankSum=-8.908;QD=6.51;ReadPosRankSum=4.128;VQSLOD=-0.0816;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:22:41.72:0,42,885	0/0:9,0:9:23.07:0,23,195	0/0:63,0:14:22.52:0,23,140	0/0:50,0:13:24.94:0,25,218	0/0:19,0:18:54.15:0,54,788	0/0:15,0:14:18.89:0,19,159	0/0:9,0:9:19.22:0,19,113	0/0:20,0:14:39.02:0,39,429	1/1:10,0:6:8.68:83,9,0	0/1:23,3:23:5.45:312,0,5	0/1:18,0:17:19.96:72,0,20	0/0:20,0:18:40.37:0,40,350	0/0:14,0:13:33.06:0,33,490	0/0:9,0:9:12.10:0,12,356	0/1:26,0:15:24.23:119,0,24	0/0:24,0:22:53.51:0,54,462	0/0:30,0:29:67.29:0,67,469	0/0:14,0:13:33.62:0,34,260	0/1:18,1:10:48.48:77,0,48	0/1:24,3:24:22.35:272,0,22	0/0:7,1:5:5.88:0,6,52	0/0:5,0:5:14.62:0,15,109	0/0:16,0:16:3.12:0,3,273	0/0:11,0:10:15.79:0,16,102	0/1:19,2:20:66.11:238,0,66	0/1:26,1:15:8.41:150,0,8	1/1:13,0:10:0.75:62,1,0	0/1:8,0:7:19.07:35,0,19
chr10	56742430	.	CAA	C	2970.99	PASS	AB=0.676;AC=39;AF=0.696;AN=56;BaseQRankSum=0.697;DP=556;FS=19.290;HRun=13;HaplotypeScore=128.9598;InbreedingCoeff=0.4795;MQ=53.03;MQ0=42;MQRankSum=-2.026;QD=7.94;ReadPosRankSum=1.341;VQSLOD=0.4747;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,1:22:13.61:0,14,622	1/1:4,1:10:19.23:85,19,0	0/0:62,0:13:19.16:0,19,155	0/0:50,0:14:23.61:0,24,226	0/0:19,0:20:50.60:0,51,621	1/1:4,11:14:18.84:177,19,0	1/1:1,5:8:8.69:120,9,0	1/1:13,0:12:17.69:74,18,0	1/1:4,0:6:11.33:42,11,0	0/1:18,0:23:33.15:33,0,42	0/1:6,0:17:15.54:90,0,16	1/1:5,14:17:32.98:306,33,0	0/0:13,0:13:27.09:0,27,382	0/0:8,0:9:26.56:0,27,322	0/1:15,0:16:5.57:41,0,6	1/1:8,13:21:38.76:361,39,0	1/1:3,27:29:69.06:669,69,0	1/1:2,11:12:30.04:291,30,0	1/1:11,0:10:0.28:57,0,0	0/1:14,0:25:84.12:96,0,84	1/1:5,0:5:5.47:24,5,0	1/1:1,4:5:11.99:115,12,0	1/1:4,10:16:17.28:206,17,0	1/1:2,9:10:15.02:145,15,0	0/1:10,0:20:67.30:67,0,77	1/1:11,0:16:5.74:74,6,0	1/1:6,0:10:5.94:57,6,0	1/1:4,0:7:7.99:30,8,0
chr10	56742435	.	A	AACAACC	6131.69	PASS	AB=0.985;AC=23;AF=0.411;AN=56;BaseQRankSum=10.463;DP=578;FS=16.579;HRun=0;HaplotypeScore=158.6457;InbreedingCoeff=0.8935;MQ=53.36;MQ0=46;MQRankSum=-11.564;QD=20.79;ReadPosRankSum=1.958;VQSLOD=3.3703;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:24:66.21:0,66,1407	0/0:10,0:10:26.71:0,27,374	0/1:63,0:12:19.47:19,0,133	0/0:52,0:15:5.30:0,5,342	0/0:22,0:21:63.21:0,63,1281	0/0:15,0:14:22.32:0,22,368	0/0:8,0:8:18.06:0,18,324	0/0:18,0:12:30.06:0,30,417	1/1:12,0:7:18.06:347,18,0	1/1:25,1:24:26.17:636,26,0	1/1:20,1:21:18.51:609,19,0	0/0:17,0:15:36.11:0,36,585	0/0:12,0:11:27.09:0,27,630	0/0:9,0:9:27.09:0,27,613	1/1:28,1:19:41.18:661,41,0	0/0:20,0:18:48.15:0,48,799	0/0:30,0:29:78.26:0,78,1349	0/0:14,0:13:33.11:0,33,560	1/1:22,0:11:24.85:388,25,0	1/1:24,5:26:32.60:912,33,0	1/1:9,0:7:11.80:145,12,0	0/0:5,0:5:15.05:0,15,275	0/0:15,0:15:35.83:0,36,563	0/0:11,0:10:14.81:0,15,248	1/1:17,4:22:51.21:936,51,0	1/1:34,1:21:55.94:852,56,0	1/1:14,0:12:20.41:426,20,0	1/1:6,0:5:14.91:200,15,0
chr10	56742457	.	C	CA	959.60	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-7.035;DP=552;FS=0.000;HRun=8;HaplotypeScore=128.0154;InbreedingCoeff=0.9241;MQ=55.48;MQ0=19;MQRankSum=0.457;QD=21.32;ReadPosRankSum=-2.734;VQSLOD=1.5638;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:21:30.12:0,30,388	1/1:1,7:8:21.06:242,21,0	0/0:32,0:12:23.36:0,23,166	0/0:41,0:21:18.81:0,19,231	0/0:22,0:22:50.87:0,51,449	0/0:14,0:14:27:0,27,247	0/0:9,0:9:8.99:0,9,82	1/1:7,30:29:50.77:838,51,0	0/0:14,0:11:32.88:0,33,281	0/0:19,0:19:45.02:0,45,410	0/0:26,0:26:62.06:0,62,553	0/0:18,0:17:44.96:0,45,396	0/0:8,0:8:15:0,15,137	0/0:8,0:8:14.99:0,15,137	0/0:29,0:25:51.02:0,51,466	0/0:19,0:18:47.90:0,48,421	0/0:31,0:30:71.96:0,72,644	0/0:14,0:13:32.93:0,33,286	0/0:29,0:20:53.97:0,54,486	0/0:25,0:25:48.01:0,48,438	0/0:19,0:17:33:0,33,300	0/0:4,0:4:11.22:0,11,86	0/0:11,0:11:26.79:0,27,229	0/0:11,0:11:20.94:0,21,177	0/0:27,0:27:57.02:0,57,521	0/0:32,0:22:56.97:0,57,512	0/0:15,0:13:30.01:0,30,274	0/0:7,0:6:18.01:0,18,165
chr10	56742647	.	TA	T	1163.50	PASS	AB=0.680;AC=17;AF=0.304;AN=56;BaseQRankSum=-2.993;DP=517;FS=2.917;HRun=15;HaplotypeScore=62.3270;InbreedingCoeff=0.7066;MQ=55.49;MQ0=26;MQRankSum=2.760;QD=8.14;ReadPosRankSum=3.024;VQSLOD=3.0326;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,1:32:49.54:0,50,539	0/1:9,2:11:14.69:15,0,122	0/0:39,0:11:19.41:0,19,137	0/0:34,1:6:7.79:0,8,51	0/0:21,1:24:23.05:0,23,325	1/1:6,8:14:20.66:135,21,0	1/1:2,9:11:20.69:135,21,0	0/0:19,0:15:26.98:0,27,233	0/0:3,0:10:11.51:0,12,64	0/0:6,0:11:14.30:0,14,74	0/0:4,0:12:20.29:0,20,122	0/1:7,13:20:37.58:169,0,38	0/0:10,0:10:20.99:0,21,182	0/0:7,0:8:12.35:0,12,135	0/0:4,0:20:37.30:0,37,204	1/1:1,14:15:29.56:192,30,0	1/1:4,20:24:17.96:243,18,0	0/1:6,14:20:57.97:183,0,58	0/0:18,0:20:31.57:0,32,246	0/0:10,0:18:23.10:0,23,134	0/0:3,0:11:12.25:0,12,58	1/1:1,7:8:11.65:70,12,0	1/1:2,10:12:19.51:121,20,0	1/1:2,5:7:16.48:100,16,0	0/0:10,0:19:31.67:0,32,179	0/0:13,0:24:35.38:0,35,199	0/0:7,0:19:23:0,23,128	0/0:9,0:21:31.65:0,32,178
chr10	56742750	.	G	GA	1837.72	PASS	AB=0.943;AC=34;AF=0.607;AN=56;BaseQRankSum=5.468;DP=566;FS=6.235;HRun=14;HaplotypeScore=98.3773;InbreedingCoeff=0.3819;MQ=55.11;MQ0=19;MQRankSum=-6.868;QD=4.79;ReadPosRankSum=-2.424;VQSLOD=1.7363;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:39,2:42:0.59:0,1,367	1/1:4,4:8:14.97:126,15,0	0/1:38,0:8:3.77:4,0,33	0/0:33,0:8:3.59:0,4,45	0/1:19,1:20:0.25:0,0,175	0/1:20,1:21:51.41:51,0,86	0/1:16,1:17:26.13:26,0,40	1/1:5,16:20:14.34:335,14,0	1/1:4,0:12:14.39:79,14,0	1/1:8,0:17:26.24:151,26,0	1/1:13,1:26:39.26:199,39,0	0/1:21,0:19:14.62:15,0,75	0/0:8,0:8:11.13:0,11,65	0/0:11,0:11:22.96:0,23,134	1/1:11,0:20:13.55:71,14,0	0/0:22,1:23:12.96:0,13,137	0/0:32,0:32:45.63:0,46,202	0/0:32,0:32:45.10:0,45,215	1/1:14,0:12:17.84:103,18,0	1/1:11,1:11:19.45:121,19,0	1/1:1,0:5:5.68:28,6,0	0/1:7,1:7:18.03:18,0,21	0/1:16,1:16:7.86:8,0,46	0/1:20,3:23:53.41:53,0,102	1/1:17,0:16:18.39:66,18,0	1/1:15,1:23:35.48:200,35,0	1/1:15,1:20:40.57:231,41,0	1/1:11,0:15:26.80:139,27,0
chr10	56743370	.	GGGACCA	G	1253.11	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.681;DP=662;FS=4.131;HRun=0;HaplotypeScore=138.1771;InbreedingCoeff=0.9877;MQ=89.85;MQ0=0;MQRankSum=-5.231;QD=48.20;ReadPosRankSum=-2.183;VQSLOD=3.3841;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,153,5170	1/1:0,7:7:18.06:432,18,0	0/0:25,0:25:60.14:0,60,1865	0/0:32,0:32:77.46:0,77,2594	0/0:24,0:24:69.15:0,69,2246	0/0:17,0:17:51.18:0,51,1836	0/0:26,0:26:69.24:0,69,2459	1/1:5,14:19:42.13:941,42,0	0/0:24,0:24:72.22:0,72,2380	0/0:20,0:20:60.20:0,60,2059	0/0:19,0:19:57.20:0,57,2009	0/0:36,0:36:99:0,108,3828	0/0:24,0:24:65.90:0,66,2244	0/0:25,0:25:75.26:0,75,2642	0/0:30,0:30:90.31:0,90,3212	0/0:27,0:27:78.27:0,78,2812	0/0:30,0:30:87.30:0,87,3006	0/0:20,0:20:57.20:0,57,2055	0/0:15,0:15:45.13:0,45,1414	0/0:23,0:23:63.22:0,63,2232	0/0:38,0:38:99:0,114,3775	0/0:19,0:19:57.16:0,57,1793	0/0:15,0:15:45.13:0,45,1467	0/0:29,0:29:87.30:0,87,3069	0/0:21,0:21:63.22:0,63,2197	0/0:22,0:22:63.21:0,63,2175	0/0:14,0:14:42.14:0,42,1514	0/0:8,0:8:15.05:0,15,533
chr10	56745269	.	GAGT	G	9380.09	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=12.402;DP=687;FS=1.369;HRun=0;HaplotypeScore=238.5177;InbreedingCoeff=0.9981;MQ=73.60;MQ0=0;MQRankSum=-14.073;QD=38.44;ReadPosRankSum=1.785;VQSLOD=5.4481;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,129,2904	0/0:8,0:8:24.08:0,24,553	0/0:25,0:24:65.57:0,66,1287	0/0:24,0:23:69.15:0,69,1308	0/0:32,0:32:96.32:0,96,2160	0/0:26,0:26:66.18:0,66,1436	0/0:29,0:29:66.22:0,66,1453	0/0:34,0:34:96.31:0,96,2092	1/1:2,23:25:72.03:1082,72,0	1/1:0,21:21:63.20:1042,63,0	1/1:5,15:20:23.08:390,23,0	0/0:34,0:34:87.03:0,87,1681	0/0:39,0:39:99:0,114,2453	0/0:21,0:21:63.19:0,63,1324	1/1:1,16:17:48.06:751,48,0	0/0:35,1:36:51.30:0,51,2087	0/0:27,0:27:75.26:0,75,1688	0/0:22,0:22:63.17:0,63,1392	1/1:0,15:15:42.14:706,42,0	1/1:1,26:27:54.16:875,54,0	1/1:3,29:31:37.68:643,38,0	0/0:17,0:17:36.06:0,36,750	0/0:16,0:16:44.87:0,45,871	0/0:8,0:8:18.05:0,18,369	1/1:2,24:26:66.11:1057,66,0	1/1:1,24:25:75.20:1239,75,0	1/1:1,22:23:63.04:973,63,0	1/1:1,12:13:39.09:621,39,0
chr10	56745293	.	T	TG	12564.74	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=19.624;DP=609;FS=1.723;HRun=2;HaplotypeScore=222.5210;InbreedingCoeff=0.9870;MQ=80.16;MQ0=0;MQRankSum=-18.066;QD=34.05;ReadPosRankSum=2.022;VQSLOD=4.2048;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,153,2118	0/0:7,0:7:21.07:0,21,294	0/0:28,0:28:78.17:0,78,1020	0/0:25,0:25:69.15:0,69,892	0/0:26,0:26:78.26:0,78,1086	1/1:4,14:18:52.67:612,53,0	1/1:3,19:22:61.15:703,61,0	0/0:38,0:38:99:0,105,1469	1/1:1,20:21:62.01:785,62,0	1/1:1,16:17:51.03:673,51,0	1/1:2,16:18:46.74:550,47,0	1/1:3,24:27:77.55:927,78,0	0/0:43,0:43:99:0,126,1752	0/0:21,0:21:63.21:0,63,875	1/1:1,20:22:65.70:816,66,0	1/1:5,27:33:82.55:1181,83,0	1/1:5,13:18:49.75:581,50,0	1/1:3,14:17:47.52:630,48,0	1/1:3,8:11:32.04:366,32,0	1/1:1,22:23:65.02:809,65,0	1/1:5,13:17:30.64:394,31,0	1/1:2,11:13:38.53:441,39,0	1/1:1,9:10:26.67:319,27,0	1/1:1,3:4:8.06:82,8,0	1/1:1,23:25:67.28:828,67,0	1/1:2,21:23:68.44:906,68,0	1/1:4,15:19:53.95:599,54,0	1/1:1,9:10:27.09:361,27,0
chr10	56745295	.	G	GATGCGT	37432.39	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=17.917;DP=681;FS=1.686;HRun=0;HaplotypeScore=221.1031;InbreedingCoeff=0.9938;MQ=78.20;MQ0=0;MQRankSum=-19.290;QD=85.27;ReadPosRankSum=2.770;VQSLOD=5.5331;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,153,3684	0/0:8,0:8:21.07:0,21,538	0/0:27,0:27:74.99:0,75,1870	0/0:29,0:29:78.21:0,78,1744	0/0:25,0:25:75.24:0,75,1822	1/1:6,14:20:57.20:1812,57,0	1/1:9,19:28:68.73:2216,69,0	0/0:41,0:41:99:0,114,2786	1/1:5,20:25:75.24:2432,75,0	1/1:9,16:25:74.25:2383,74,0	1/1:2,16:18:51.17:1658,51,0	1/1:10,24:34:96.32:2963,96,0	0/0:42,0:42:99:0,126,3197	0/0:19,0:19:57.18:0,57,1409	1/1:8,20:29:75.26:2518,75,0	1/1:6,27:34:89.63:2948,90,0	1/1:7,13:20:46.55:1591,47,0	1/1:4,14:18:51.11:1724,51,0	1/1:6,8:14:40.95:1223,41,0	1/1:4,22:26:69.24:2348,69,0	1/1:11,13:23:45.15:1519,45,0	1/1:5,11:16:42.13:1294,42,0	1/1:3,9:12:27.09:887,27,0	1/1:3,3:6:12.04:409,12,0	1/1:8,23:31:69.24:2298,69,0	1/1:4,21:25:69.24:2380,69,0	1/1:8,13:23:56.72:1886,57,0	1/1:2,9:11:27.09:944,27,0
chr10	56746722	.	A	AG	22430.35	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=4.027;DP=842;FS=6.528;HRun=3;HaplotypeScore=109.5341;InbreedingCoeff=0.9996;MQ=85.29;MQ0=0;MQRankSum=-3.635;QD=36.89;ReadPosRankSum=4.739;VQSLOD=4.3222;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:60,0:60:99:0,162,1929	0/0:8,0:8:24.07:0,24,287	0/0:19,0:19:45.05:0,45,510	0/0:35,0:35:89.86:0,90,959	0/0:26,0:26:72.19:0,72,840	1/1:1,24:25:72.24:1007,72,0	1/1:0,22:22:54.18:756,54,0	0/0:27,0:27:66.18:0,66,766	1/1:3,19:22:57.19:798,57,0	1/1:5,35:40:99:1346,99,0	1/1:1,13:14:39.13:546,39,0	1/1:2,48:50:99:1815,132,0	0/0:24,0:24:69.19:0,69,804	0/0:35,0:35:99:0,102,1199	1/1:1,32:33:90.30:1260,90,0	1/1:5,48:53:99:1890,135,0	1/1:2,47:49:99:1783,129,0	1/1:0,34:34:96.32:1344,96,0	1/1:3,22:25:66.19:903,66,0	1/1:1,23:24:66.22:923,66,0	1/1:6,43:49:99:1721,123,0	1/1:1,24:25:69.23:960,69,0	1/1:1,13:14:39.13:545,39,0	1/1:1,29:30:78.26:1091,78,0	1/1:0,23:23:66.22:923,66,0	1/1:0,30:30:90.27:1225,90,0	1/1:3,26:29:75.25:1049,75,0	1/1:0,17:17:39.13:546,39,0
chr10	56753480	.	TGAGAGAGAGA	T	3233.06	PASS	AB=0.860;AC=28;AF=0.737;AN=38;BaseQRankSum=5.680;DP=603;FS=1.188;HRun=0;HaplotypeScore=225.7232;InbreedingCoeff=0.4337;MQ=70.91;MQ0=25;MQRankSum=-4.207;QD=9.62;ReadPosRankSum=1.974;VQSLOD=2.7242;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:33:51.64:52,0,322	./.	./.	./.	0/0:15,0:14:8.82:0,9,105	1/1:14,3:19:3.01:86,3,0	./.	1/1:18,0:20:0.89:2,1,0	1/1:4,0:5:3.01:80,3,0	1/1:17,0:21:6.01:151,6,0	./.	1/1:21,7:30:19.44:441,19,0	0/0:18,0:17:20.17:0,20,614	0/0:23,0:22:23.97:0,24,534	1/1:22,0:29:1.55:4,2,0	1/1:29,14:49:53.80:1227,54,0	1/1:9,0:9:3:25,3,0	1/1:7,6:12:18.06:516,18,0	./.	0/1:13,0:14:0:0,0,0	./.	1/1:17,0:20:6.02:129,6,0	1/1:12,3:15:5.52:49,6,0	0/1:19,4:22:0.24:0,0,0	./.	0/1:7,0:10:1.84:303,0,2	1/1:11,1:16:11.94:290,12,0	./.
chr10	56753530	.	AGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	A	200.09	PASS	AB=1.000;AC=7;AF=0.146;AN=48;BaseQRankSum=2.480;DP=625;FS=3.332;HRun=0;HaplotypeScore=272.5217;InbreedingCoeff=0.4408;MQ=31.90;MQ0=132;MQRankSum=-1.845;QD=2.00;ReadPosRankSum=1.367;VQSLOD=2.6432;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:38:54.71:0,55,4899	0/0:9,0:8:11.63:0,12,613	./.	./.	0/0:14,0:14:6.02:0,6,633	0/0:20,0:12:0.94:0,1,3	1/1:20,0:11:2.30:38,2,0	0/0:34,0:26:33.11:0,33,1396	0/0:15,0:13:7.19:0,7,151	0/0:27,0:20:42.14:0,42,1763	0/0:12,0:11:3.48:0,3,158	0/0:24,6:23:0.94:0,1,2	0/0:18,0:13:21.07:0,21,1808	0/0:28,0:21:33.11:0,33,3174	0/0:19,0:22:5.25:0,5,51	1/1:31,11:38:8.92:115,9,0	0/1:13,0:6:32.57:33,0,286	./.	0/0:18,0:14:18.03:0,18,612	0/0:12,0:18:12.04:0,12,542	0/0:43,0:36:7.43:0,7,147	./.	1/1:12,13:21:2.05:127,2,0	0/0:25,10:24:0.47:0,0,1	0/0:18,0:23:0.89:0,1,2	0/0:17,0:16:25.35:0,25,504	0/0:13,0:11:14.95:0,15,418	0/0:16,0:2:3.01:0,3,123
chr10	56755904	.	ACACCCTTTTCC	A	11779.77	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=15.742;DP=674;FS=7.646;HRun=0;HaplotypeScore=218.1767;InbreedingCoeff=0.9899;MQ=77.43;MQ0=0;MQRankSum=-16.096;QD=65.81;ReadPosRankSum=3.321;VQSLOD=3.5928;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,108,5824	0/0:9,0:9:24.08:0,24,1324	0/0:26,0:26:74.91:0,75,3109	0/0:23,0:23:63.22:0,63,3184	0/0:29,0:29:81.25:0,81,4237	1/1:2,16:18:48.16:1644,48,0	1/1:11,10:21:27.09:929,27,0	0/0:36,0:36:99:0,102,5230	0/0:24,0:24:72.25:0,72,3762	0/0:25,0:25:75.26:0,75,4120	0/0:18,0:18:45.15:0,45,2475	1/1:2,23:25:60.21:2068,60,0	0/0:28,0:28:69.24:0,69,3460	0/0:27,0:27:78.27:0,78,4191	0/0:36,0:36:99:0,108,5612	1/1:4,29:33:72.25:2481,72,0	1/1:3,18:21:42.14:1447,42,0	1/1:4,7:11:9.03:297,9,0	0/0:29,0:29:69.24:0,69,3703	0/0:18,0:18:54.19:0,54,3012	0/0:32,0:32:84.29:0,84,4713	1/1:4,11:15:30.10:1032,30,0	1/1:2,11:13:33.11:1056,33,0	1/1:9,13:22:24.08:827,24,0	0/0:15,0:15:42.14:0,42,2374	0/0:32,0:32:90.31:0,90,4769	0/0:31,0:31:87.30:0,87,4712	0/0:21,0:21:54.19:0,54,3051
chr10	56756058	.	TGAA	T	23192.88	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=17.028;DP=843;FS=0.288;HRun=0;HaplotypeScore=130.8406;InbreedingCoeff=0.9983;MQ=54.64;MQ0=7;MQRankSum=-1.059;QD=41.05;ReadPosRankSum=4.989;VQSLOD=6.1860;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:48:99:0,144,3136	0/0:9,0:9:27.08:0,27,569	0/0:33,0:11:30.10:0,30,645	0/0:35,0:15:45.15:0,45,922	0/0:38,0:38:99:0,111,2466	1/1:0,25:25:69.19:1119,69,0	1/1:1,13:14:33.11:550,33,0	0/0:44,0:44:99:0,117,2547	1/1:1,26:27:78.27:1299,78,0	1/1:1,25:26:75.21:1172,75,0	1/1:1,26:27:69.19:1119,69,0	1/1:2,31:33:87.30:1448,87,0	0/0:37,0:37:99:0,108,2367	0/0:33,0:33:99:0,99,2244	1/1:3,36:39:84.29:1399,84,0	1/1:2,43:45:99:1998,120,0	1/1:1,31:32:43.70:1073,44,0	1/1:0,35:35:84.24:1369,84,0	1/1:3,18:21:57.17:914,57,0	1/1:1,30:31:81.19:1287,81,0	1/1:5,32:37:72.20:1169,72,0	1/1:2,29:31:72.07:1067,72,0	1/1:0,19:19:51.13:819,51,0	1/1:0,24:24:69.24:1149,69,0	1/1:3,24:27:63.22:1050,63,0	1/1:1,29:30:90.29:1443,90,0	1/1:0,34:34:87.30:1449,87,0	1/1:0,8:8:18.06:300,18,0
chr10	56760424	.	C	CCT	19409.66	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-11.650;DP=595;FS=5.975;HRun=0;HaplotypeScore=66.4475;InbreedingCoeff=0.9961;MQ=63.67;MQ0=4;MQRankSum=0.748;QD=42.94;ReadPosRankSum=3.998;VQSLOD=6.1262;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:78.23:0,78,1082	0/0:6,0:6:15.04:0,15,203	0/0:20,0:18:50.72:0,51,645	0/0:21,0:18:36.09:0,36,454	0/0:9,0:9:24.07:0,24,334	1/1:4,17:21:57.18:991,57,0	1/1:10,14:23:63.18:1042,63,0	0/0:18,0:17:39.11:0,39,536	1/1:1,24:25:60.20:1077,60,0	1/1:0,13:13:39.11:654,39,0	1/1:0,14:15:33.11:593,33,0	1/1:9,28:37:99:1778,105,0	0/0:22,0:22:66.20:0,66,918	0/0:20,0:20:60.19:0,60,864	1/1:2,25:28:66.22:1185,66,0	1/1:7,29:36:99:1687,99,0	1/1:6,18:24:69.19:1116,69,0	1/1:4,18:22:60.18:1035,60,0	1/1:7,20:21:60.20:1040,60,0	1/1:4,14:18:36.05:594,36,0	1/1:3,37:41:91.86:1658,92,0	1/1:1,15:16:33.11:592,33,0	1/1:0,15:15:39.13:698,39,0	1/1:5,16:21:53.93:893,54,0	1/1:1,22:24:45.15:808,45,0	1/1:1,19:20:57.02:946,57,0	1/1:0,13:13:35.94:646,36,0	1/1:1,8:10:21.07:377,21,0
chr10	56760497	.	TA	T	7108.06	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=9.466;DP=651;FS=1.088;HRun=1;HaplotypeScore=69.9413;InbreedingCoeff=0.9957;MQ=58.11;MQ0=10;MQRankSum=0.961;QD=33.37;ReadPosRankSum=1.932;VQSLOD=4.7181;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,111,1754	0/0:12,0:12:36.12:0,36,573	0/0:24,0:9:26.44:0,26,369	0/0:22,0:8:19.57:0,20,316	0/0:17,0:17:51.17:0,51,814	1/1:0,20:19:42.14:587,42,0	1/1:0,35:35:75.25:1049,75,0	0/0:26,0:22:63.20:0,63,982	0/0:25,0:25:63.21:0,63,1005	0/0:22,0:21:66.23:0,66,1055	0/0:12,0:12:36.08:0,36,545	1/1:0,40:40:99:1426,102,0	0/0:31,0:31:84.29:0,84,1334	0/0:23,0:23:60.20:0,60,957	0/0:23,0:23:63.21:0,63,1004	1/1:0,25:25:69.23:959,69,0	1/1:0,27:27:75.25:1049,75,0	1/1:3,20:23:57.12:739,57,0	0/0:25,0:23:60.20:0,60,955	0/0:19,0:19:54.17:0,54,840	0/0:38,0:36:96.31:0,96,1511	1/1:0,16:16:30.10:419,30,0	1/1:0,5:5:15.05:210,15,0	1/1:1,21:21:48.16:671,48,0	0/0:22,0:22:48.15:0,48,744	0/0:29,0:28:84.28:0,84,1322	0/0:18,0:18:48.16:0,48,767	0/0:9,0:9:21.07:0,21,335
chr10	56761304	.	G	GAA	7033.64	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-10.116;DP=863;FS=1.703;HRun=11;HaplotypeScore=157.5086;InbreedingCoeff=0.9677;MQ=69.39;MQ0=1;MQRankSum=-2.428;QD=20.75;ReadPosRankSum=-3.490;VQSLOD=1.8589;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:51:99:0,122,1141	0/0:21,0:21:53.19:0,53,501	0/0:27,0:26:17.48:0,17,218	0/0:15,0:15:28.23:0,28,226	0/0:27,0:33:71.20:0,71,696	0/0:19,0:20:53.79:0,54,506	0/0:30,0:32:65.94:0,66,680	0/0:33,0:34:80.04:0,80,724	1/1:5,29:39:52.91:576,53,0	1/1:5,14:29:60.07:625,60,0	1/1:4,15:24:46.57:546,47,0	0/0:45,0:51:99:0,138,1262	0/0:27,0:30:59.38:0,59,582	0/0:32,0:33:65.59:0,66,604	1/1:12,33:56:52.81:973,53,0	0/0:36,0:43:75.05:0,75,846	0/0:21,0:22:38.70:0,39,361	0/0:19,0:22:47.22:0,47,414	1/1:9,16:29:5.78:598,6,0	1/1:9,22:35:49.20:849,49,0	1/1:7,23:33:43.61:547,44,0	0/0:28,0:30:57.91:0,58,588	0/0:20,0:21:56.81:0,57,535	0/0:34,0:34:77.95:0,78,747	1/1:1,30:36:81.62:996,82,0	1/1:4,15:22:56.07:655,56,0	1/1:5,17:26:52.55:617,53,0	1/1:8,0:8:6:52,6,0
chr10	56762129	.	AT	A	9064.82	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=17.355;DP=815;FS=0.574;HRun=2;HaplotypeScore=92.0166;InbreedingCoeff=1.0000;MQ=82.00;MQ0=0;MQRankSum=-7.402;QD=36.26;ReadPosRankSum=0.829;VQSLOD=5.1108;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:93.27:0,93,1368	0/0:11,0:11:33.11:0,33,493	0/0:26,0:26:78.20:0,78,1102	0/0:29,0:29:83.74:0,84,1186	0/0:33,0:33:99:0,99,1438	1/1:3,22:25:69.21:881,69,0	1/1:2,23:25:66.21:856,66,0	0/0:42,0:42:99:0,126,1888	0/0:22,0:22:66.22:0,66,989	0/0:22,0:22:66.22:0,66,973	0/0:25,0:25:75.21:0,75,1099	1/1:3,40:43:99:1616,126,0	0/0:40,0:40:99:0,117,1655	0/0:33,1:34:63.39:0,63,1445	0/0:40,0:40:99:0,117,1709	1/1:3,38:41:75.42:1473,75,0	1/1:4,17:21:54.18:699,54,0	1/1:2,17:19:54.18:700,54,0	0/0:26,0:26:75.20:0,75,1038	0/0:38,0:38:99:0,108,1600	0/0:29,0:29:87.29:0,87,1304	1/1:1,28:29:87.28:1129,87,0	1/1:1,23:24:72.23:932,72,0	1/1:0,23:23:60.19:779,60,0	0/0:26,0:26:78.20:0,78,1122	0/0:29,0:29:87.29:0,87,1304	0/0:38,0:38:99:0,108,1617	0/0:24,0:24:72.24:0,72,1074
chr10	56762181	.	GC	G	8698.37	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=18.408;DP=827;FS=5.069;HRun=2;HaplotypeScore=93.1999;InbreedingCoeff=0.9993;MQ=86.82;MQ0=0;MQRankSum=-7.768;QD=34.65;ReadPosRankSum=2.441;VQSLOD=5.2382;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:76.52:0,77,1352	0/0:15,0:15:42.14:0,42,630	0/0:34,0:34:96.03:0,96,1383	0/0:26,0:26:75.25:0,75,1112	0/0:32,0:32:93.31:0,93,1391	1/1:2,35:37:91.62:1370,92,0	1/1:2,29:31:87.25:1098,87,0	0/0:51,0:51:99:0,144,2067	0/0:19,0:19:57.19:0,57,854	0/0:30,0:30:90.30:0,90,1348	0/0:25,0:25:75.25:0,75,1121	1/1:2,36:38:99:1431,114,0	0/0:32,0:32:90.29:0,90,1327	0/0:40,0:40:99:0,120,1775	0/0:41,0:41:99:0,123,1824	1/1:3,36:39:21.33:1232,21,0	1/1:2,18:20:51.17:662,51,0	1/1:3,16:19:28.16:564,28,0	0/0:28,0:28:84.26:0,84,1235	0/0:30,0:30:90.30:0,90,1348	0/0:31,0:31:90.30:0,90,1347	1/1:0,23:23:69.14:857,69,0	1/1:2,18:20:57.08:688,57,0	1/1:2,22:24:63.14:796,63,0	0/0:18,0:18:54.16:0,54,770	0/0:35,0:35:99:0,102,1511	0/0:39,0:39:99:0,114,1687	0/0:14,0:14:39.13:0,39,584
chr10	56765910	.	CT	C	334.18	PASS	AB=0.931;AC=6;AF=0.107;AN=56;BaseQRankSum=-4.211;DP=539;FS=8.225;HRun=16;HaplotypeScore=89.8090;InbreedingCoeff=0.5534;MQ=66.68;MQ0=2;MQRankSum=0.637;QD=2.91;ReadPosRankSum=-0.073;VQSLOD=-0.1332;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:26,5:29:19.29:19,0,355	1/1:4,9:13:25.52:159,26,0	0/1:36,0:17:5.74:6,0,18	0/0:19,0:9:9.62:0,10,54	0/0:15,1:17:8.94:0,9,181	0/0:10,1:16:15.84:0,16,162	0/0:7,0:12:23.81:0,24,155	1/1:15,19:33:29.60:281,30,0	0/0:5,0:13:22.73:0,23,113	0/0:9,0:34:68.05:0,68,342	0/0:8,0:15:18.20:0,18,97	0/0:6,0:17:22.36:0,22,132	0/0:11,0:13:19.38:0,19,126	0/0:13,0:16:35.87:0,36,286	0/0:8,0:26:37.24:0,37,197	0/0:8,0:18:32.01:0,32,208	0/0:11,0:34:36.95:0,37,211	0/0:6,1:15:3.07:0,3,80	0/0:12,0:25:41.39:0,41,236	0/0:3,0:15:38.82:0,39,221	0/0:6,0:12:14.29:0,14,73	0/0:3,0:8:14.27:0,14,72	0/0:7,0:20:29.63:0,30,161	0/0:2,0:12:25.97:0,26,150	0/0:11,0:18:21.37:0,21,110	0/0:9,0:23:39.83:0,40,209	0/0:3,0:11:17.21:0,17,92	0/0:2,0:11:8.52:0,9,43
chr10	56766537	.	C	CTTT	2636.17	PASS	AB=0.595;AC=17;AF=0.304;AN=56;BaseQRankSum=-1.583;DP=523;FS=3.153;HRun=12;HaplotypeScore=90.4395;InbreedingCoeff=0.8434;MQ=58.43;MQ0=5;MQRankSum=-2.679;QD=15.69;ReadPosRankSum=-0.363;VQSLOD=2.2866;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:43:58:0,58,773	0/0:8,0:8:11.85:0,12,110	0/0:19,0:14:8.27:0,8,69	0/0:14,0:10:0.23:0,0,1	0/0:32,0:33:61.06:0,61,686	1/1:7,18:27:18.02:266,18,0	1/1:6,8:15:8.99:102,9,0	0/0:26,0:27:43.27:0,43,499	0/0:7,0:7:12.83:0,13,161	0/0:17,0:16:29.91:0,30,320	0/0:17,0:17:3.09:0,3,260	1/1:21,3:21:37.46:413,37,0	0/0:9,0:9:21.01:0,21,235	0/0:11,0:12:26.28:0,26,261	0/0:18,0:18:45.01:0,45,492	0/1:7,13:21:3.59:384,0,4	1/1:9,8:20:38.97:503,39,0	1/1:1,7:8:12.04:220,12,0	0/0:15,0:16:23.79:0,24,244	0/0:15,0:18:29.67:0,30,287	0/0:18,0:18:29.92:0,30,336	1/1:6,8:14:21.05:330,21,0	1/1:6,13:21:19.23:265,19,0	1/1:6,9:15:21.05:353,21,0	0/0:16,0:18:32.58:0,33,311	0/0:26,0:28:47.55:0,48,476	0/0:21,0:20:38.67:0,39,435	0/0:5,0:6:8.91:0,9,85
chr10	56766621	.	C	CTTG	5532.59	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-5.065;DP=380;FS=2.067;HRun=0;HaplotypeScore=146.9529;InbreedingCoeff=0.9772;MQ=53.17;MQ0=0;MQRankSum=-10.713;QD=48.53;ReadPosRankSum=-1.770;VQSLOD=6.3073;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:81:0,81,847	0/0:8,0:8:20.97:0,21,176	0/0:7,0:4:11.80:0,12,78	0/0:11,0:6:14.77:0,15,102	0/0:14,0:14:41.99:0,42,382	1/1:0,9:9:24.08:513,24,0	1/1:2,11:12:27.09:576,27,0	0/0:26,0:26:35.39:0,35,466	0/0:9,0:9:24.02:0,24,225	0/0:12,0:12:32.87:0,33,263	0/0:4,0:4:8.99:0,9,80	1/1:4,14:17:42.14:864,42,0	0/0:12,0:13:35.94:0,36,307	0/0:13,0:13:37.21:0,37,328	0/0:18,0:18:32.61:0,33,356	1/1:0,20:21:60.21:1266,60,0	1/1:2,12:14:24.08:504,24,0	1/1:0,8:8:14.96:247,15,0	0/0:10,0:9:26.89:0,27,207	0/0:15,0:15:39.03:0,39,367	0/0:22,0:22:56.94:0,57,489	1/1:2,8:10:27.01:530,27,0	1/1:1,7:8:21.07:448,21,0	1/1:1,12:13:29.44:585,29,0	0/0:12,0:12:35.92:0,36,296	0/0:16,0:16:38.87:0,39,314	0/0:12,0:12:26.95:0,27,227	0/0:8,0:8:24:0,24,217
chr10	56767849	.	C	CT	2245.39	PASS	AB=1.000;AC=28;AF=0.500;AN=56;BaseQRankSum=-6.217;DP=471;FS=1.649;HRun=12;HaplotypeScore=87.5872;InbreedingCoeff=0.7354;MQ=64.31;MQ0=10;MQRankSum=2.022;QD=9.68;ReadPosRankSum=-3.038;VQSLOD=2.5183;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,1:30:17.57:0,18,297	1/1:6,0:6:3.87:25,4,0	0/0:34,0:16:2.77:0,3,63	0/0:29,1:14:14.92:0,15,99	0/0:14,0:14:29.58:0,30,209	0/0:7,0:17:17.58:0,18,62	0/0:12,0:18:11.94:0,12,34	1/1:14,9:22:27.43:252,27,0	1/1:4,10:14:14.62:127,15,0	1/1:2,11:13:30:277,30,0	1/1:3,17:20:30.05:292,30,0	0/0:5,0:14:20.32:0,20,58	0/1:11,0:11:6.23:6,0,89	0/1:7,0:6:10.49:10,0,35	1/1:9,8:18:11.82:92,12,0	0/0:3,0:15:18.80:0,19,59	0/0:10,0:17:10.15:0,10,29	0/0:4,0:13:7.35:0,7,30	1/1:13,6:19:8.51:221,9,0	1/1:3,4:7:2.96:19,3,0	1/1:13,7:19:9.01:87,9,0	0/0:3,0:7:8.23:0,8,24	0/0:1,0:12:11.23:0,11,37	0/0:3,0:15:16.28:0,16,47	1/1:7,5:11:14.17:135,14,0	1/1:9,10:19:26.11:386,26,0	1/1:14,5:19:17.29:274,17,0	1/1:14,9:23:28.35:250,28,0
chr10	56767866	.	CTT	C	1436.79	PASS	AB=0.929;AC=19;AF=0.339;AN=56;BaseQRankSum=3.382;DP=427;FS=7.290;HRun=14;HaplotypeScore=75.9531;InbreedingCoeff=0.8480;MQ=61.81;MQ0=11;MQRankSum=-3.890;QD=9.45;ReadPosRankSum=2.559;VQSLOD=1.9363;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:63.05:0,63,734	0/0:3,0:3:6.02:0,6,84	0/0:39,0:14:14.10:0,14,164	0/1:35,0:16:12.50:13,0,82	0/0:17,0:17:39.12:0,39,527	1/1:9,5:14:23.33:202,23,0	1/1:2,10:13:20.72:178,21,0	0/0:16,0:17:29.42:0,29,357	0/0:10,0:10:21:0,21,217	0/0:14,0:14:23.54:0,24,246	0/0:15,0:15:37.31:0,37,423	1/1:6,5:13:17.60:197,18,0	0/0:6,0:6:12.01:0,12,133	0/0:7,0:7:11.86:0,12,120	0/0:15,0:16:23.66:0,24,272	1/1:7,8:15:35.81:308,36,0	1/1:8,3:11:17.96:159,18,0	1/1:8,4:13:18.72:188,19,0	0/0:20,0:20:32.53:0,33,397	0/0:4,0:5:9.02:0,9,111	0/0:11,0:10:2.96:0,3,20	1/1:5,2:7:14.48:115,14,0	1/1:4,8:13:20.65:178,21,0	1/1:11,3:14:11.97:109,12,0	0/0:11,0:12:27.04:0,27,329	0/0:22,0:22:37.86:0,38,447	0/0:15,0:16:35.11:0,35,358	0/0:16,0:16:23.51:0,24,248
chr10	56767985	.	G	GA	2034.78	PASS	AB=0.778;AC=22;AF=0.393;AN=56;BaseQRankSum=-4.979;DP=395;FS=0.000;HRun=12;HaplotypeScore=43.9689;InbreedingCoeff=0.3859;MQ=59.25;MQ0=11;MQRankSum=0.075;QD=10.65;ReadPosRankSum=-1.966;VQSLOD=1.9047;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,2:32:0.96:0,1,479	0/1:3,4:7:25.79:99,0,26	0/1:13,0:4:6.04:6,0,8	0/0:11,0:3:5.94:0,6,43	0/0:12,1:16:0.79:0,1,141	1/1:1,11:13:26.88:248,27,0	1/1:2,13:15:18.03:175,18,0	1/1:9,20:31:32.44:447,32,0	0/0:11,1:13:0.16:0,0,152	0/0:14,0:12:29.61:0,30,210	0/1:11,1:11:5.30:5,0,129	1/1:1,15:16:32.73:321,33,0	0/1:9,1:11:0.29:0,0,152	0/0:10,0:11:15.93:0,16,116	0/0:17,1:18:38.22:0,38,269	0/1:4,6:11:7.05:87,0,7	1/1:7,9:16:17.11:310,17,0	0/1:2,6:8:6.88:102,0,7	0/0:16,0:18:38.86:0,39,255	0/0:10,0:10:20.82:0,21,150	0/0:6,0:6:14.91:0,15,109	1/1:2,5:6:17.86:154,18,0	1/1:2,5:8:18.30:150,18,0	0/1:3,11:13:6.89:102,0,7	0/1:7,0:7:12.17:12,0,58	0/0:13,1:14:6.11:0,6,199	0/0:16,0:16:26.77:0,27,194	0/0:22,1:23:17.43:0,17,280
chr10	56768213	.	G	GT	2829.48	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=10.319;DP=461;FS=1.467;HRun=1;HaplotypeScore=60.8752;InbreedingCoeff=0.9806;MQ=64.02;MQ0=2;MQRankSum=-10.296;QD=21.60;ReadPosRankSum=3.174;VQSLOD=3.9375;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:99:0,99,1327	0/0:3,0:3:9.03:0,9,126	0/0:18,0:14:25.82:0,26,389	0/0:18,0:10:27.07:0,27,337	0/0:21,0:21:60.20:0,60,836	1/1:1,14:15:17.65:355,18,0	1/1:2,15:17:26.03:333,26,0	0/0:36,0:36:91.12:0,91,1322	0/0:11,0:11:33.11:0,33,453	0/0:11,0:11:30.10:0,30,419	0/0:17,0:17:48.15:0,48,651	1/1:6,18:24:30.51:392,31,0	0/0:16,0:16:48.06:0,48,628	0/0:14,0:14:39.13:0,39,545	0/0:22,0:22:63.21:0,63,875	1/1:1,23:24:60.19:745,60,0	1/1:2,15:18:33.08:396,33,0	1/1:1,5:6:15.04:191,15,0	0/0:13,0:13:39.13:0,39,537	0/0:9,0:9:27.08:0,27,357	0/0:12,0:12:33.10:0,33,443	1/1:0,8:8:21.07:255,21,0	1/1:1,8:9:15.01:176,15,0	1/1:2,8:10:16.86:199,17,0	0/0:9,0:8:21.07:0,21,291	0/0:18,0:18:51.17:0,51,713	0/0:34,0:34:99:0,99,1339	0/0:15,0:15:42.13:0,42,570
chr10	56768889	.	AAAAC	A	1502.17	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=5.341;DP=646;FS=0.650;HRun=0;HaplotypeScore=116.2091;InbreedingCoeff=0.8115;MQ=67.46;MQ0=0;MQRankSum=-4.042;QD=22.42;ReadPosRankSum=-1.873;VQSLOD=2.6973;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:96.33:0,96,2346	1/1:0,13:13:33.11:552,33,0	0/0:21,0:19:25.24:0,25,490	0/1:20,0:18:5.21:5,0,414	0/0:20,0:20:48.11:0,48,1017	0/0:16,0:16:36.12:0,36,861	0/0:16,0:16:33.11:0,33,814	1/1:10,24:34:66.21:1070,66,0	0/0:18,0:18:42.14:0,42,993	0/0:29,0:29:81.27:0,81,1866	0/0:19,0:19:42.14:0,42,1035	0/0:30,0:30:90.29:0,90,2096	0/0:21,0:21:57.20:0,57,1348	0/0:22,0:22:66.21:0,66,1572	0/0:32,0:32:75.26:0,75,1835	0/0:30,0:30:75.24:0,75,1765	0/0:24,0:24:60.21:0,60,1425	0/0:20,0:20:51.15:0,51,1162	0/0:15,0:15:36.09:0,36,711	0/0:27,0:27:72.23:0,72,1667	0/0:24,0:24:63.22:0,63,1505	0/0:34,0:34:78.23:0,78,1796	0/0:16,0:16:39.08:0,39,811	0/0:29,0:29:72.20:0,72,1701	0/0:17,0:17:48.16:0,48,1164	0/0:21,0:21:54.15:0,54,1117	0/0:32,0:32:81.26:0,81,1922	0/0:5,0:5:12.04:0,12,256
chr10	56769344	.	C	CT	1735.01	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-3.526;DP=445;FS=18.285;HRun=12;HaplotypeScore=57.3237;InbreedingCoeff=0.8918;MQ=66.91;MQ0=10;MQRankSum=1.319;QD=14.11;ReadPosRankSum=1.162;VQSLOD=2.2159;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:23:31.36:0,31,290	0/0:8,0:8:5.93:0,6,44	0/0:10,0:10:8.54:0,9,55	0/0:13,0:12:8.51:0,9,48	0/0:18,0:18:22.15:0,22,209	1/1:4,11:14:30.01:283,30,0	1/1:4,2:7:8.85:73,9,0	0/0:25,0:22:40.76:0,41,289	0/0:4,0:4:2.94:0,3,22	0/0:20,0:21:33.67:0,34,299	0/0:23,0:26:48.58:0,49,332	1/1:4,10:15:7.82:211,8,0	0/0:18,0:17:23.80:0,24,171	0/0:10,0:9:20.87:0,21,153	0/0:24,0:24:56.48:0,56,403	1/1:7,15:22:30.05:292,30,0	1/1:10,18:26:32.83:468,33,0	1/1:3,9:12:20.87:189,21,0	0/0:16,0:14:26.81:0,27,197	0/0:14,0:15:18.88:0,19,182	0/0:11,0:11:17.80:0,18,131	1/1:2,2:5:8.85:72,9,0	1/1:2,12:14:27.04:263,27,0	1/1:0,3:3:9.01:88,9,0	0/0:15,0:14:26.60:0,27,188	0/0:20,0:21:37.74:0,38,265	0/0:27,0:25:47.57:0,48,350	0/0:12,0:11:29.79:0,30,216
chr10	56769499	.	C	CG	2814.06	PASS	AB=0.600;AC=35;AF=0.921;AN=38;BaseQRankSum=-1.155;DP=221;FS=15.502;HRun=0;HaplotypeScore=38.3750;InbreedingCoeff=0.0683;MQ=18.72;MQ0=105;MQRankSum=-1.240;QD=21.32;ReadPosRankSum=0.958;VQSLOD=3.7201;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:10,4:4:9.03:130,9,0	1/1:3,2:1:3.01:43,3,0	./.	./.	1/1:0,8:8:15.01:192,15,0	./.	./.	./.	1/1:3,3:3:6.02:86,6,0	1/1:2,10:8:24.08:332,24,0	1/1:1,6:5:12:149,12,0	1/1:1,4:2:3.01:43,3,0	1/1:2,3:2:6.02:84,6,0	1/1:1,3:3:9.03:129,9,0	1/1:1,8:8:18.06:259,18,0	1/1:1,4:4:12.04:172,12,0	./.	0/0:11,0:2:0.47:0,0,1	0/1:1,2:2:35.83:37,0,36	1/1:0,12:10:30.10:427,30,0	./.	./.	1/1:1,4:3:2.80:81,3,0	./.	1/1:1,6:5:15.05:216,15,0	1/1:1,9:7:18.06:262,18,0	1/1:0,10:7:15.05:215,15,0	1/1:4,1:1:3.01:43,3,0
chr10	56771261	.	TC	T	5702.74	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=13.479;DP=617;FS=11.617;HRun=3;HaplotypeScore=59.6234;InbreedingCoeff=0.9980;MQ=68.08;MQ0=0;MQRankSum=2.387;QD=30.01;ReadPosRankSum=3.652;VQSLOD=3.6534;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:72.42:0,72,1265	0/0:9,0:9:27.08:0,27,370	0/0:10,0:8:23.94:0,24,298	0/0:10,0:9:18.06:0,18,255	0/0:27,0:27:78.26:0,78,1115	1/1:1,30:31:75.23:923,75,0	1/1:2,16:18:36.11:445,36,0	0/0:30,0:30:84.27:0,84,1192	0/0:19,0:19:54.18:0,54,771	0/0:30,0:30:87.29:0,87,1234	0/0:24,0:24:66.22:0,66,941	1/1:1,25:26:72.23:893,72,0	0/0:23,0:23:69.21:0,69,970	0/0:10,0:10:27.09:0,27,389	0/0:22,0:22:66.22:0,66,943	1/1:1,29:30:38.05:924,38,0	1/1:0,20:20:45.61:559,46,0	1/1:2,18:20:45.14:558,45,0	0/0:21,0:21:57.17:0,57,799	0/0:27,0:27:81.25:0,81,1142	0/0:23,0:23:66.22:0,66,949	1/1:0,17:17:41.90:509,42,0	1/1:0,14:14:33.10:409,33,0	1/1:0,14:14:39.12:484,39,0	0/0:23,0:23:66.20:0,66,930	0/0:37,0:37:99:0,105,1507	0/0:31,0:31:90.23:0,90,1219	0/0:18,0:18:48.16:0,48,689
chr10	56772679	.	A	ATGTG	4934.93	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=4.394;DP=815;FS=29.948;HRun=0;HaplotypeScore=188.3957;InbreedingCoeff=0.6016;MQ=59.74;MQ0=3;MQRankSum=-3.731;QD=10.87;ReadPosRankSum=-4.215;VQSLOD=2.0283;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:42:75.58:0,76,1142	0/0:16,0:16:23.82:0,24,335	0/0:47,0:36:74.63:0,75,1257	0/0:29,0:17:19.88:0,20,293	0/0:33,0:33:78.25:0,78,1197	0/0:22,0:22:8.40:0,8,387	0/1:32,0:32:10.87:11,0,208	0/0:36,0:36:78.26:0,78,1244	1/1:26,0:26:9.50:173,10,0	1/1:29,0:28:56.56:870,57,0	1/1:25,0:25:4.98:24,5,0	0/0:42,0:42:18.19:0,18,891	0/0:40,0:40:93.07:0,93,1441	0/0:27,0:27:70.96:0,71,968	1/1:48,0:48:25.90:349,26,0	0/1:42,0:42:72.73:73,0,164	1/1:18,0:18:2.88:15,3,0	0/1:17,0:17:33.24:50,0,33	1/1:6,8:14:27.09:503,27,0	1/1:36,0:35:10.09:109,10,0	1/1:24,0:26:44.85:733,45,0	0/0:26,0:26:33.09:0,33,617	0/1:28,0:26:2.16:2,0,334	0/1:24,0:24:46.54:47,0,112	1/1:24,0:25:11.38:115,11,0	1/1:27,0:27:70.32:1190,70,0	1/1:29,0:28:15.05:328,15,0	1/1:7,1:8:21.03:342,21,0
chr10	56772686	.	T	TGCGAGA	3137	PASS	AB=0.887;AC=24;AF=0.429;AN=56;BaseQRankSum=7.513;DP=816;FS=31.626;HRun=0;HaplotypeScore=208.2766;InbreedingCoeff=0.0460;MQ=56.72;MQ0=4;MQRankSum=-5.984;QD=5.94;ReadPosRankSum=-2.317;VQSLOD=0.9692;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:42:92.90:0,93,1684	0/0:13,0:13:24.08:0,24,459	0/0:49,0:34:95.72:0,96,1680	0/0:31,0:16:29:0,29,461	0/0:32,0:32:84.23:0,84,1464	0/1:10,1:27:44.14:44,0,109	0/1:8,19:29:63.72:196,0,64	0/0:31,0:31:86.29:0,86,1399	0/1:29,0:29:55.37:134,0,55	0/1:34,0:33:99:114,0,475	1/1:26,0:26:2.04:6,2,0	0/1:38,1:42:53.72:747,0,54	0/0:36,0:36:99:0,105,1990	0/0:29,0:29:82.41:0,82,1412	0/1:49,0:49:47:139,0,47	0/1:5,31:40:12.97:419,0,13	1/1:2,13:17:3.01:97,3,0	1/1:4,9:20:9.37:307,9,0	0/0:14,0:13:26.64:0,27,279	0/1:36,0:35:34.66:35,0,48	0/1:26,0:26:13.01:13,0,384	0/1:26,0:26:43.38:43,0,148	1/1:25,1:28:30.23:392,30,0	1/1:15,0:18:11.73:150,12,0	1/1:21,0:21:9.12:62,9,0	0/1:28,0:28:99:253,0,459	0/1:30,0:28:13.90:166,0,14	0/0:8,0:8:9.36:0,9,93
chr10	56772688	.	T	TGTGTGTGAGAGA	7025.39	PASS	AB=0.861;AC=30;AF=0.536;AN=56;BaseQRankSum=1.622;DP=850;FS=27.127;HRun=0;HaplotypeScore=265.2307;InbreedingCoeff=0.4126;MQ=55.60;MQ0=4;MQRankSum=-3.409;QD=12.68;ReadPosRankSum=-4.176;VQSLOD=2.0095;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:43:98.53:0,99,2197	0/0:4,0:13:24.29:0,24,647	0/0:50,0:34:71.97:0,72,1625	0/0:32,0:14:21.03:0,21,406	0/0:27,0:31:81.28:0,81,2000	0/0:26,0:27:6.54:0,7,628	0/1:31,0:31:99:104,0,359	0/0:21,0:30:59.04:0,59,1662	1/1:1,0:28:9.92:285,10,0	1/1:4,1:37:92.35:1651,92,0	0/1:2,0:26:0:0,0,0	0/1:45,0:46:99:350,0,1032	0/0:37,0:38:99:0,105,2573	0/0:29,0:31:84.19:0,84,1810	1/1:5,0:51:15.04:292,15,0	0/1:40,0:41:99:334,0,227	1/1:17,0:17:6.02:109,6,0	0/1:18,0:18:99:137,0,122	1/1:14,0:13:24.48:366,24,0	1/1:3,0:37:8.92:157,9,0	1/1:27,0:27:48.05:621,48,0	0/1:18,0:32:9.67:10,0,908	0/1:32,0:30:99:190,0,543	0/1:13,0:21:36.65:37,0,175	1/1:4,0:24:3.48:121,3,0	1/1:14,0:29:79.27:1406,79,0	1/1:2,0:30:17.75:481,18,0	1/1:8,0:8:21.05:376,21,0
chr10	56773474	.	A	AG	6253.38	PASS	AC=52;AF=0.963;AN=54;BaseQRankSum=-0.274;DP=236;FS=0.000;HRun=0;HaplotypeScore=188.1387;InbreedingCoeff=0.5436;MQ=33.39;MQ0=0;MQRankSum=-1.732;QD=26.72;ReadPosRankSum=1.325;VQSLOD=4.4154;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,8:9:27.02:248,27,0	1/1:0,3:3:9.01:87,9,0	./.	0/0:2,0:1:2.98:0,3,21	1/1:0,13:13:33.01:291,33,0	1/1:0,12:12:36.05:337,36,0	1/1:0,5:5:12.02:112,12,0	1/1:0,4:4:12.03:129,12,0	1/1:0,8:8:24.03:226,24,0	1/1:0,14:14:39.09:411,39,0	1/1:0,12:12:36.02:321,36,0	1/1:1,16:17:48.07:452,48,0	1/1:0,9:9:27.03:254,27,0	1/1:0,14:14:42.05:393,42,0	1/1:0,14:14:42.06:396,42,0	1/1:0,15:15:45.07:428,45,0	1/1:0,9:9:24.04:233,24,0	1/1:0,5:4:12.03:126,12,0	1/1:0,4:4:12.03:131,12,0	1/1:0,6:6:18.02:169,18,0	1/1:0,8:8:12.01:111,12,0	1/1:0,7:7:21.01:186,21,0	1/1:0,5:5:15.01:135,15,0	1/1:0,8:8:21.02:199,21,0	1/1:0,7:7:21.03:195,21,0	1/1:0,10:10:27.06:282,27,0	1/1:2,12:14:38.59:341,39,0	1/1:0,2:2:6.01:61,6,0
chr10	56773479	.	AAC	A	5794.93	PASS	AC=52;AF=0.963;AN=54;BaseQRankSum=-0.277;DP=235;FS=0.000;HRun=0;HaplotypeScore=192.1518;InbreedingCoeff=0.5425;MQ=33.07;MQ0=0;MQRankSum=-1.732;QD=24.98;ReadPosRankSum=1.337;VQSLOD=5.1911;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,8:8:24:211,24,0	1/1:0,3:3:9:82,9,0	./.	0/0:2,0:1:3.01:0,3,35	1/1:0,13:13:32.94:270,33,0	1/1:0,12:12:36:315,36,0	1/1:0,5:5:12:104,12,0	1/1:0,4:4:12.03:121,12,0	1/1:0,8:8:24:211,24,0	1/1:0,14:14:39.06:386,39,0	1/1:0,12:12:35.95:299,36,0	1/1:0,16:16:48.01:422,48,0	1/1:0,9:9:27:237,27,0	1/1:0,14:14:42:367,42,0	1/1:0,14:14:42.01:369,42,0	1/1:0,15:15:45.02:400,45,0	1/1:0,9:9:24.01:218,24,0	1/1:0,5:4:12.02:118,12,0	1/1:0,4:4:12.03:123,12,0	1/1:0,6:6:18:157,18,0	1/1:0,8:8:11.99:104,12,0	1/1:0,7:7:20.97:174,21,0	1/1:0,5:5:14.99:126,15,0	1/1:0,8:8:17.99:153,18,0	1/1:0,7:7:21:182,21,0	1/1:0,10:10:27.05:265,27,0	1/1:2,12:14:38.73:325,39,0	1/1:0,2:2:6.01:57,6,0
chr10	56773542	.	CG	C	3908.79	PASS	AB=0.790;AC=51;AF=0.911;AN=56;BaseQRankSum=0.043;DP=362;FS=11.052;HRun=1;HaplotypeScore=76.3062;InbreedingCoeff=-0.1013;MQ=55.57;MQ0=1;MQRankSum=1.172;QD=10.80;ReadPosRankSum=0.855;VQSLOD=0.5449;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:13,2:17:0.40:109,0,0	1/1:0,1:1:3.01:37,3,0	0/1:10,3:9:11.52:12,0,79	0/1:9,1:4:17.88:35,0,18	0/1:6,7:12:1.70:95,0,2	1/1:0,11:13:30.01:346,30,0	1/1:8,2:12:22.87:185,23,0	1/1:1,22:23:48.31:544,48,0	1/1:4,0:9:12.87:43,13,0	1/1:1,0:6:5.05:27,5,0	1/1:1,0:8:3.64:22,4,0	1/1:2,13:15:19.03:174,19,0	0/1:11,5:16:9.73:25,0,10	1/1:18,3:20:17.10:182,17,0	1/1:6,0:20:11.49:57,11,0	1/1:1,1:19:41.92:375,42,0	1/1:0,0:12:32.98:285,33,0	1/1:0,0:9:24:213,24,0	1/1:7,0:15:2.08:97,2,0	1/1:4,0:13:18.43:77,18,0	1/1:4,0:8:4.91:34,5,0	1/1:3,7:10:14.27:184,14,0	1/1:0,13:14:27:329,27,0	1/1:2,7:9:12.50:152,12,0	1/1:1,0:11:15.82:67,16,0	1/1:3,0:13:22.17:97,22,0	1/1:14,0:15:1.26:46,1,0	1/1:5,0:9:12.96:58,13,0
chr10	56773953	.	A	AG	215.90	PASS	AB=0.826;AC=14;AF=0.259;AN=54;BaseQRankSum=4.837;DP=396;FS=1.931;HRun=1;HaplotypeScore=75.5691;InbreedingCoeff=0.6052;MQ=83.83;MQ0=0;MQRankSum=1.005;QD=2.77;ReadPosRankSum=-0.137;VQSLOD=-0.5474;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:41.47:0,41,421	0/0:7,0:7:3.63:0,4,92	0/1:20,0:20:11.59:12,0,490	0/0:16,0:16:25.66:0,26,292	0/0:20,1:21:44.36:0,44,352	0/0:6,0:6:4.17:0,4,25	0/1:7,8:15:11.16:77,0,11	0/0:12,0:12:31.58:0,32,326	0/0:16,0:16:33.10:0,33,432	0/0:17,0:17:48.10:0,48,620	0/0:7,0:7:15.02:0,15,188	1/1:1,5:6:3.01:30,3,0	0/0:19,0:19:42.11:0,42,561	0/0:29,0:29:72.10:0,72,912	0/0:24,0:24:57.11:0,57,723	1/1:5,6:11:8.46:90,8,0	1/1:7,0:8:5.95:47,6,0	1/1:2,1:3:2.96:19,3,0	0/0:10,0:10:15.02:0,15,176	0/0:16,0:16:42.05:0,42,508	0/0:36,0:36:83.73:0,84,1090	1/1:7,1:8:3.36:21,3,0	./.	1/1:5,2:7:8.97:78,9,0	0/0:10,0:10:24.04:0,24,311	0/0:17,0:17:42.11:0,42,525	0/0:23,0:23:61.67:0,62,776	0/0:9,0:9:21.07:0,21,291
chr10	56773954	.	A	AG	745.90	PASS	AB=0.929;AC=22;AF=0.407;AN=54;BaseQRankSum=4.850;DP=402;FS=1.366;HRun=10;HaplotypeScore=79.2716;InbreedingCoeff=0.5881;MQ=82.75;MQ0=0;MQRankSum=-1.563;QD=5.37;ReadPosRankSum=-3.527;VQSLOD=0.8324;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,5:17:8.69:61,9,0	1/1:3,2:6:11.82:97,12,0	0/0:19,0:19:30.37:0,30,198	0/1:17,0:17:27.18:27,0,58	0/1:11,8:20:26.12:156,0,26	0/1:6,0:6:10.50:30,0,10	0/1:16,0:16:9.85:101,0,10	1/1:12,0:15:5.48:25,5,0	0/0:17,0:18:19.94:0,20,154	0/0:14,0:16:25.13:0,25,201	0/0:7,0:7:11.93:0,12,92	1/1:5,0:5:3.01:32,3,0	0/0:19,0:19:29.91:0,30,246	0/0:30,0:30:50.03:0,50,402	0/0:25,2:27:29.01:0,29,239	1/1:11,0:11:11.99:115,12,0	1/1:7,0:7:8.93:67,9,0	1/1:3,0:3:5.93:40,6,0	0/0:8,0:8:11.92:0,12,93	0/0:16,0:16:14.96:0,15,123	0/0:35,2:37:53.38:0,53,442	1/1:8,0:8:16.55:105,17,0	./.	1/1:8,0:8:8.96:81,9,0	0/0:9,0:10:17.01:0,17,129	0/0:17,0:18:19.95:0,20,151	0/0:22,0:23:14.96:0,15,313	0/0:9,0:9:20.95:0,21,172
chr10	56774191	.	TA	T	4471.23	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=8.316;DP=534;FS=4.449;HRun=7;HaplotypeScore=52.9723;InbreedingCoeff=0.9929;MQ=61.63;MQ0=4;MQRankSum=0.591;QD=22.47;ReadPosRankSum=4.670;VQSLOD=4.7536;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:31:72.23:0,72,905	0/0:5,0:5:15.04:0,15,176	0/0:12,0:6:15.01:0,15,151	0/0:14,0:11:28.98:0,29,300	0/0:28,0:28:55.95:0,56,817	1/1:1,25:25:57.13:581,57,0	1/1:3,21:24:39.08:398,39,0	0/0:35,0:35:96.24:0,96,1136	0/0:13,0:13:30.05:0,30,357	0/0:17,0:17:42.13:0,42,528	0/0:14,0:14:42.09:0,42,510	1/1:0,21:21:48.11:490,48,0	0/0:20,0:20:54.17:0,54,672	0/0:12,0:12:27.09:0,27,340	0/0:22,0:22:57.06:0,57,643	1/1:0,20:20:54.12:551,54,0	1/1:7,28:34:57.64:716,58,0	1/1:4,23:25:60.14:612,60,0	0/0:14,0:14:33.10:0,33,408	0/0:17,0:17:39.03:0,39,454	0/0:18,0:18:51.16:0,51,642	1/1:3,8:11:27.04:267,27,0	1/1:0,12:12:27.06:275,27,0	1/1:4,19:22:57.13:581,57,0	0/0:8,0:8:18.06:0,18,226	0/0:22,0:22:37.47:0,37,625	0/0:21,0:20:50.18:0,50,639	0/0:10,0:10:30.10:0,30,377
chr10	56774314	.	C	CA	3139.49	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=4.185;DP=557;FS=21.617;HRun=7;HaplotypeScore=72.2470;InbreedingCoeff=0.8979;MQ=57.13;MQ0=44;MQRankSum=-0.212;QD=15.47;ReadPosRankSum=0.671;VQSLOD=2.1293;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:36:66.10:0,66,633	0/0:6,0:5:6.48:0,6,59	0/1:36,0:12:9.55:10,0,59	0/0:47,0:16:19.96:0,20,163	0/0:24,0:24:54.08:0,54,520	1/1:10,6:14:33.10:396,33,0	1/1:5,14:16:27.08:326,27,0	0/0:23,0:21:47.37:0,47,461	0/0:14,0:10:11.93:0,12,115	0/0:19,0:16:39.06:0,39,376	0/0:21,0:21:45.07:0,45,432	1/1:9,6:11:18.06:217,18,0	0/0:20,0:18:48.06:0,48,455	0/0:17,0:15:32.83:0,33,315	0/0:14,0:13:17.94:0,18,171	1/1:7,12:19:45.12:526,45,0	1/1:14,21:32:63.18:733,63,0	1/1:9,12:17:42.13:504,42,0	0/0:18,0:11:30.05:0,30,289	0/0:19,0:18:48.08:0,48,462	0/0:7,0:7:18.03:0,18,174	1/1:3,6:7:18.05:213,18,0	1/1:4,10:12:18.05:213,18,0	1/1:4,15:13:18.05:215,18,0	0/0:12,0:11:22.59:0,23,207	0/0:21,0:19:46.84:0,47,439	0/0:18,0:15:44.56:0,45,413	0/0:11,0:7:15.01:0,15,139
chr10	56774520	.	T	TA	5122.78	PASS	AB=0.687;AC=45;AF=0.804;AN=56;BaseQRankSum=0.132;DP=495;FS=1.388;HRun=13;HaplotypeScore=60.1142;InbreedingCoeff=0.4450;MQ=48.75;MQ0=26;MQRankSum=0.294;QD=11.16;ReadPosRankSum=0.343;VQSLOD=4.4151;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,30:38:30.89:565,31,0	1/1:6,6:8:0.44:147,0,0	0/0:4,0:1:0:0,0,0	0/0:4,0:2:4.53:0,5,14	1/1:12,19:30:39.46:495,39,0	1/1:25,0:23:34.19:175,34,0	1/1:16,0:15:22.76:114,23,0	1/1:15,16:28:11.99:349,12,0	1/1:4,7:8:9.01:84,9,0	1/1:11,12:22:3.57:257,4,0	1/1:4,11:16:18.02:167,18,0	1/1:16,0:16:28.63:158,29,0	0/0:15,0:14:28.78:0,29,190	0/0:13,0:13:20.68:0,21,144	0/1:12,11:18:8:218,0,8	1/1:24,0:22:34.28:183,34,0	1/1:36,0:33:48.38:245,48,0	1/1:17,0:15:22.63:113,23,0	1/1:8,4:12:20.82:171,21,0	0/1:10,5:13:25.22:136,0,25	1/1:4,9:13:9.45:230,9,0	1/1:2,0:2:2.84:14,3,0	1/1:7,0:7:14.27:73,14,0	1/1:16,0:15:34.09:171,34,0	1/1:1,11:12:21.02:195,21,0	1/1:4,14:18:37.22:324,37,0	0/1:11,15:24:37.28:258,0,37	1/1:4,12:15:31.28:281,31,0
chr10	56774533	.	A	AAC	4287.88	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=-8.230;DP=464;FS=1.421;HRun=0;HaplotypeScore=66.8630;InbreedingCoeff=0.8585;MQ=61.79;MQ0=2;MQRankSum=-2.180;QD=26.15;ReadPosRankSum=0.280;VQSLOD=5.2968;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:61.22:0,61,296	0/0:7,0:7:18.83:0,19,101	0/0:5,0:2:0.47:0,0,1	0/0:10,0:8:17.54:0,18,134	0/0:29,0:28:25.46:0,25,295	1/1:0,16:18:36.04:583,36,0	1/1:0,12:15:24.08:385,24,0	0/0:30,0:30:6.54:0,7,309	0/0:11,0:10:16.29:0,16,100	0/0:20,0:20:37.82:0,38,300	0/0:16,0:16:27.33:0,27,148	1/1:0,15:16:30.09:475,30,0	0/0:13,0:13:29.11:0,29,355	0/0:15,0:15:30.05:0,30,347	0/0:16,0:16:32.41:0,32,193	1/1:0,20:21:41.95:633,42,0	1/1:2,25:31:54.12:887,54,0	1/1:1,11:17:23.95:345,24,0	0/1:15,0:15:18.13:18,0,106	0/0:14,0:14:34.63:0,35,257	0/0:15,0:15:25.79:0,26,184	1/1:0,2:2:5.95:70,6,0	1/1:0,11:11:20.54:273,21,0	1/1:0,15:18:36.59:619,37,0	0/0:10,0:10:17.24:0,17,86	0/0:16,0:16:16.58:0,17,140	0/0:23,0:22:43.74:0,44,293	0/0:15,0:15:38.11:0,38,205
chr10	56774968	.	T	TAC	2013.21	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=9.437;DP=514;FS=40.803;HRun=0;HaplotypeScore=94.2048;InbreedingCoeff=0.4357;MQ=68.92;MQ0=9;MQRankSum=-3.133;QD=5.96;ReadPosRankSum=-3.378;VQSLOD=0.0376;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:22.02:0,22,265	1/1:2,5:7:6.02:98,6,0	0/0:26,0:17:12.52:0,13,187	0/0:28,0:14:3.59:0,4,115	0/1:16,0:16:6.21:6,0,71	1/1:25,0:25:12.04:158,12,0	1/1:5,23:28:4.83:141,5,0	1/1:39,0:36:35.71:260,36,0	0/1:13,0:10:3.48:3,0,60	0/0:9,0:9:19.76:0,20,184	0/1:10,0:10:5.89:6,0,60	1/1:19,3:22:24.19:402,24,0	0/0:13,0:13:38.96:0,39,412	0/0:22,0:22:50.28:0,50,491	0/1:25,0:23:10.32:10,0,105	1/1:16,2:17:18:244,18,0	1/1:20,0:20:15.05:188,15,0	1/1:10,1:11:11.87:144,12,0	0/0:17,0:17:8.37:0,8,221	0/1:10,0:10:0.18:0,0,61	0/0:22,0:21:11.54:0,12,161	0/1:5,0:4:0:0,0,0	1/1:7,0:7:5.94:77,6,0	1/1:29,3:32:23.96:432,24,0	0/1:12,0:12:18.97:19,0,51	0/1:19,0:19:0.01:0,0,213	0/1:19,0:18:9.17:9,0,113	0/0:6,0:6:11.74:0,12,78
chr10	56774972	.	C	CACAG	4478.12	PASS	AB=0.776;AC=30;AF=0.556;AN=54;BaseQRankSum=5.753;DP=571;FS=63.195;HRun=0;HaplotypeScore=123.2625;InbreedingCoeff=-0.1008;MQ=63.85;MQ0=9;MQRankSum=-4.507;QD=9.82;ReadPosRankSum=-2.169;VQSLOD=1.5873;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:37:99:126,0,242	1/1:7,0:7:1.15:39,1,0	0/0:26,0:16:12.38:0,12,187	0/0:27,0:13:3.38:0,3,115	0/1:9,0:20:7.03:7,0,74	0/1:2,20:24:9.66:246,0,10	0/1:28,1:29:19.15:199,0,19	1/1:34,0:31:66.81:478,67,0	0/1:11,0:16:53.69:81,0,54	0/1:13,0:17:99:113,0,147	0/1:10,0:13:37.32:37,0,59	1/1:4,19:24:12.75:685,13,0	0/0:14,0:14:38.98:0,39,526	0/0:19,0:21:50.41:0,50,636	0/1:18,0:27:91.87:92,0,98	1/1:2,16:18:18.02:435,18,0	1/1:3,20:25:15.05:413,15,0	1/1:3,9:14:14.82:224,15,0	0/1:14,0:19:99:140,0,200	0/1:15,0:15:13.35:13,0,61	0/0:16,0:22:16.92:0,17,168	./.	1/1:1,6:8:5.76:167,6,0	1/1:6,27:34:10.31:556,10,0	0/1:9,0:16:13.78:14,0,53	0/1:18,0:26:99:299,0,186	0/1:13,0:19:99:106,0,108	0/1:5,0:5:8.24:8,0,64
chr10	56775665	.	T	TGCGCTTGCTA	7250.44	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-6.288;DP=602;FS=24.837;HRun=0;HaplotypeScore=166.5074;InbreedingCoeff=0.9150;MQ=51.35;MQ0=27;MQRankSum=-10.722;QD=45.89;ReadPosRankSum=-0.562;VQSLOD=2.5488;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,114,3784	0/0:11,0:11:33.10:0,33,1043	0/0:20,0:3:3.01:0,3,102	0/0:28,0:1:3.01:0,3,102	0/0:30,0:30:81.70:0,82,2505	1/1:4,4:12:15.05:726,15,0	1/1:9,6:22:20.95:1086,21,0	0/0:25,0:23:69.22:0,69,2115	0/0:15,0:15:42.12:0,42,1235	0/0:39,0:36:99:0,102,3072	0/0:15,0:15:42.14:0,42,1408	1/1:14,7:26:24.08:1239,24,0	0/0:29,0:29:87.30:0,87,2879	0/0:23,0:23:66.22:0,66,2104	0/0:19,0:19:57.18:0,57,1718	1/1:11,7:22:24.08:1154,24,0	1/1:8,8:22:18.06:962,18,0	1/1:11,3:20:12.31:534,12,0	0/0:17,0:16:48.12:0,48,1442	0/0:35,0:34:99:0,99,3296	0/0:21,0:21:63.22:0,63,2139	1/1:8,2:13:9.03:419,9,0	1/1:8,2:10:14.72:666,15,0	1/1:5,1:8:9.03:465,9,0	0/0:17,0:17:51.17:0,51,1589	0/0:22,0:22:66.23:0,66,2147	0/0:30,0:30:81.26:0,81,2642	0/0:7,0:7:21.07:0,21,712
chr10	56776369	.	C	CAA	4120.21	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=3.582;DP=537;FS=1.673;HRun=13;HaplotypeScore=97.5960;InbreedingCoeff=0.8546;MQ=53.72;MQ0=18;MQRankSum=-3.839;QD=11.29;ReadPosRankSum=-1.293;VQSLOD=2.4721;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:51:87.75:0,88,687	0/0:8,0:10:11.56:0,12,135	0/0:13,0:9:12.60:0,13,73	0/0:13,0:10:4.54:0,5,88	0/0:11,0:13:17.86:0,18,158	1/1:8,0:14:21.02:199,21,0	1/1:10,0:20:32:293,32,0	0/0:19,0:19:29.40:0,29,234	1/1:6,7:15:21.06:261,21,0	1/1:9,7:13:23.51:269,24,0	1/1:7,6:12:7.46:117,7,0	1/1:12,2:25:15.03:155,15,0	0/0:20,0:24:31.89:0,32,246	0/0:26,0:27:40.91:0,41,309	1/1:12,3:24:35.53:363,36,0	1/1:10,3:21:24.05:264,24,0	1/1:20,0:26:23.95:232,24,0	1/1:10,3:15:23.64:243,24,0	1/1:11,10:24:9.99:329,10,0	1/1:6,3:8:8.93:80,9,0	1/1:7,5:20:14.47:149,14,0	1/1:8,1:11:19.24:189,19,0	1/1:9,1:10:3.01:37,3,0	1/1:14,1:17:6.01:57,6,0	1/1:4,9:15:26.52:312,27,0	1/1:10,11:20:29.53:324,30,0	1/1:16,9:25:21.80:244,22,0	1/1:7,0:6:0.89:2,1,0
chr10	56777652	.	G	GA	5175.53	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-14.075;DP=652;FS=24.461;HRun=9;HaplotypeScore=64.2146;InbreedingCoeff=0.9994;MQ=75.83;MQ0=0;MQRankSum=-1.744;QD=25.88;ReadPosRankSum=3.787;VQSLOD=3.5187;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,129,1221	0/0:14,0:14:38.99:0,39,338	0/0:16,0:16:23.95:0,24,205	0/0:13,0:13:28.95:0,29,226	0/0:30,0:30:74.97:0,75,649	1/1:2,15:17:39.11:431,39,0	1/1:3,23:26:63.17:697,63,0	0/0:27,0:27:68.96:0,69,594	0/0:24,0:24:65.94:0,66,565	0/0:21,0:21:59.98:0,60,520	0/0:14,0:14:38.97:0,39,333	1/1:4,28:32:72.19:796,72,0	0/0:28,0:28:52.30:0,52,598	0/0:17,0:17:44.96:0,45,381	0/0:30,0:30:77.98:0,78,677	1/1:6,22:28:57.15:629,57,0	1/1:3,24:27:57.15:630,57,0	1/1:3,17:20:48.13:531,48,0	0/0:23,0:23:53.98:0,54,469	0/0:31,0:31:83.96:0,84,725	0/0:34,0:34:98.96:0,99,855	1/1:0,17:17:45.08:484,45,0	1/1:2,11:13:30.08:332,30,0	1/1:0,19:20:60:645,60,0	0/0:21,0:21:56.96:0,57,490	0/0:22,0:22:56.69:0,57,480	0/0:25,0:25:56.97:0,57,494	0/0:12,0:12:32.98:0,33,286
chr10	56778230	.	C	CT	3876.37	PASS	AB=0.832;AC=31;AF=0.554;AN=56;BaseQRankSum=-6.673;DP=435;FS=13.892;HRun=12;HaplotypeScore=47.3465;InbreedingCoeff=0.7928;MQ=65.55;MQ0=4;MQRankSum=2.806;QD=13.70;ReadPosRankSum=-2.372;VQSLOD=1.6432;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,30:37:59.92:562,60,0	1/1:1,0:6:11.36:57,11,0	0/0:12,0:12:21.96:0,22,134	0/0:12,0:10:10.40:0,10,56	1/1:6,14:20:26.98:251,27,0	0/0:20,0:20:53.52:0,54,382	0/0:11,0:12:20.54:0,21,138	1/1:14,5:30:53.11:320,53,0	1/1:2,6:8:12.02:117,12,0	1/1:3,9:12:24:220,24,0	1/1:3,12:15:14.03:277,14,0	0/0:15,0:15:38.73:0,39,283	0/0:12,0:12:20.80:0,21,153	0/0:9,0:9:23.76:0,24,169	1/1:3,11:14:27.04:263,27,0	0/1:7,0:7:2.44:2,0,92	0/0:22,0:26:48.62:0,49,330	0/1:17,2:21:7.57:8,0,245	1/1:5,15:20:45.02:423,45,0	1/1:5,7:11:23.99:224,24,0	0/1:3,8:11:0.88:149,0,1	0/0:8,0:7:5.94:0,6,44	0/0:13,0:13:26.68:0,27,185	0/0:12,0:12:26.83:0,27,197	1/1:6,10:15:5.17:212,5,0	1/1:3,16:18:42.02:399,42,0	1/1:7,12:20:10.96:247,11,0	1/1:7,6:13:15.02:146,15,0
chr10	56792609	.	GGTGTGTGT	G	289.46	PASS	AB=0.895;AC=7;AF=0.194;AN=36;BaseQRankSum=3.334;DP=511;FS=5.873;HRun=0;HaplotypeScore=127.0559;InbreedingCoeff=0.4986;MQ=64.61;MQ0=17;MQRankSum=-4.848;QD=4.52;ReadPosRankSum=-1.047;VQSLOD=2.0843;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:15.05:0,15,501	1/1:6,2:10:8.65:85,9,0	./.	./.	0/0:10,0:10:2.24:0,2,66	0/0:20,0:20:15.05:0,15,476	0/0:38,0:38:20.58:0,21,650	./.	./.	0/1:15,2:17:47.97:113,0,48	./.	0/0:14,0:19:6.96:0,7,221	0/0:10,0:11:18.04:0,18,392	0/0:18,0:17:12.04:0,12,268	1/1:14,2:16:6.02:129,6,0	0/0:14,0:13:6.02:0,6,167	0/0:17,0:23:9:0,9,171	0/0:15,0:15:15.05:0,15,513	0/0:17,0:15:0:0,0,0	./.	0/0:53,0:52:0:0,0,0	0/0:15,0:13:9.03:0,9,341	./.	0/0:31,0:31:36.09:0,36,1188	./.	1/1:19,1:20:2.56:73,3,0	./.	./.
chr10	56793912	.	TGCACGCACGCACGCAC	T	13453.56	PASS	AC=20;AF=0.385;AN=52;BaseQRankSum=-8.310;DP=609;FS=25.311;HRun=0;HaplotypeScore=216.4484;InbreedingCoeff=0.9591;MQ=37.84;MQ0=56;MQRankSum=0.974;QD=63.46;ReadPosRankSum=1.334;VQSLOD=2.5190;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:41:15.05:0,15,1128	0/0:3,0:13:21.07:0,21,908	./.	0/0:18,0:4:8.77:0,9,229	0/0:7,0:17:8.06:0,8,409	0/0:6,0:28:45.15:0,45,748	0/0:8,0:25:38.73:0,39,665	0/0:10,0:18:33.09:0,33,1019	1/1:1,20:21:36.12:1627,36,0	1/1:3,25:28:54.15:2007,54,0	1/1:5,16:19:27.09:1166,27,0	0/0:8,0:33:54.18:0,54,888	0/0:13,0:12:17.71:0,18,1233	0/0:26,0:26:13.48:0,13,1046	1/1:2,18:19:36.12:1627,36,0	0/0:4,0:19:33.11:0,33,543	0/0:6,0:23:18.06:0,18,297	0/0:8,0:10:12:0,12,145	1/1:10,11:19:21.07:648,21,0	1/1:5,21:26:39.13:1639,39,0	./.	0/0:5,0:25:33.11:0,33,552	0/0:5,0:17:29.86:0,30,504	0/0:9,0:20:21.07:0,21,363	1/1:4,21:24:42.14:1866,42,0	1/1:4,22:25:47.98:1517,48,0	1/1:3,7:10:15.05:678,15,0	1/1:5,9:13:15.05:678,15,0
chr10	56793923	.	ACG	A	2603.48	PASS	AB=0.985;AC=40;AF=0.769;AN=52;BaseQRankSum=7.957;DP=547;FS=2.421;HRun=0;HaplotypeScore=158.6342;InbreedingCoeff=0.5916;MQ=34.94;MQ0=57;MQRankSum=-1.210;QD=6.24;ReadPosRankSum=3.378;VQSLOD=2.9281;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:32:15.05:0,15,286	1/1:13,0:13:14.26:44,14,0	./.	0/1:15,1:3:36.76:37,0,80	0/0:16,0:16:8.06:0,8,80	1/1:27,0:27:37.80:141,38,0	1/1:27,0:23:28.21:106,28,0	0/1:18,0:14:5:5,0,135	1/1:20,0:20:34.83:187,35,0	1/1:25,0:25:23.97:269,24,0	1/1:18,0:16:26.23:169,26,0	1/1:28,0:28:46.63:178,47,0	0/0:15,0:15:17.80:0,18,338	0/0:24,0:24:15.05:0,15,287	1/1:18,1:18:34.83:188,35,0	1/1:16,1:17:29.03:109,29,0	1/1:21,0:19:15.57:60,16,0	0/1:11,0:10:5.59:6,0,71	1/1:13,0:11:18.17:155,18,0	1/1:21,0:21:37.95:239,38,0	./.	1/1:22,0:22:23.64:92,24,0	1/1:16,0:16:21.61:82,22,0	0/1:19,0:17:10.59:31,0,11	1/1:23,0:22:40.72:247,41,0	1/1:22,0:21:38.07:269,38,0	1/1:8,0:8:14.58:82,15,0	1/1:13,0:12:14.51:78,15,0
chr10	56794938	.	C	CTT	2181.52	PASS	AB=1.000;AC=43;AF=0.768;AN=56;BaseQRankSum=1.106;DP=428;FS=4.640;HRun=16;HaplotypeScore=60.6608;InbreedingCoeff=0.6034;MQ=63.91;MQ0=22;MQRankSum=-2.102;QD=7.15;ReadPosRankSum=-0.831;VQSLOD=-0.0181;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:32:0.67:0,1,175	1/1:2,7:10:9.03:110,9,0	0/0:25,0:10:1.86:0,2,9	0/0:18,0:12:11.07:0,11,72	0/0:20,0:23:31.42:0,31,212	1/1:12,0:13:14.03:93,14,0	1/1:8,1:9:2.38:86,2,0	1/1:23,1:26:19.98:125,20,0	1/1:14,0:13:12.13:157,12,0	1/1:17,0:15:26.69:195,27,0	1/1:10,0:10:14.96:121,15,0	1/1:12,0:12:11.76:106,12,0	0/0:7,0:10:8.14:0,8,45	0/0:13,0:12:5.31:0,5,40	1/1:9,0:8:2.74:40,3,0	1/1:7,0:13:3:29,3,0	1/1:9,1:19:5.68:65,6,0	1/1:11,4:15:19.99:170,20,0	1/1:14,0:14:21.20:153,21,0	1/1:13,0:13:14.85:108,15,0	1/1:8,0:7:6.27:62,6,0	1/1:5,2:6:9.02:100,9,0	1/1:12,0:15:8.38:72,8,0	0/1:7,0:4:5.49:5,0,7	1/1:13,0:11:8.97:69,9,0	1/1:20,0:21:21.59:158,22,0	1/1:15,1:17:15.88:137,16,0	1/1:10,0:9:21.21:179,21,0
chr10	56794939	.	T	TTTC	3227.04	PASS	AB=0.919;AC=27;AF=0.482;AN=56;BaseQRankSum=-1.498;DP=429;FS=6.132;HRun=0;HaplotypeScore=62.9820;InbreedingCoeff=0.3621;MQ=63.70;MQ0=24;MQRankSum=2.783;QD=12.96;ReadPosRankSum=4.225;VQSLOD=2.3841;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:32:77.94:0,78,821	0/0:10,0:10:15.52:0,16,101	0/0:26,0:10:6.93:0,7,103	0/0:18,0:12:16.95:0,17,206	0/0:23,0:23:63.08:0,63,741	0/1:13,0:12:16.07:16,0,120	0/1:11,0:9:29.69:30,0,90	0/0:25,0:25:37.29:0,37,285	0/1:6,9:13:14.63:242,0,15	1/1:4,13:15:39.99:528,40,0	1/1:2,9:11:20.87:304,21,0	0/1:12,0:12:34.53:35,0,80	0/0:9,0:9:21.01:0,21,217	0/0:13,0:12:29.67:0,30,243	0/1:4,4:8:4.80:73,0,5	0/1:14,0:13:2.45:2,0,79	0/1:21,0:19:11.14:11,0,89	0/1:19,0:15:59.86:60,0,63	1/1:11,2:13:31.66:345,32,0	1/1:3,10:13:26.69:284,27,0	1/1:7,1:7:11.49:119,11,0	0/1:8,0:6:6.28:28,0,6	0/0:16,0:15:4.41:0,4,165	0/0:7,0:4:7.18:0,7,38	1/1:2,11:11:8.98:170,9,0	1/1:6,17:22:55.65:578,56,0	1/1:4,14:18:17.38:238,17,0	1/1:5,5:9:26.54:359,27,0
chr10	56794940	.	T	TTC	2359.86	PASS	AB=0.956;AC=21;AF=0.375;AN=56;BaseQRankSum=0.159;DP=427;FS=8.192;HRun=0;HaplotypeScore=59.7618;InbreedingCoeff=0.5580;MQ=63.69;MQ0=24;MQRankSum=3.061;QD=14.05;ReadPosRankSum=4.783;VQSLOD=2.1006;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:31:78.25:0,78,795	0/1:11,0:11:14.23:14,0,73	0/0:26,0:10:8.23:0,8,98	0/0:18,0:12:17.08:0,17,199	0/0:23,0:23:63.08:0,63,707	0/0:13,0:12:21.17:0,21,141	0/0:11,0:9:0.15:0,0,99	0/0:25,0:25:32.03:0,32,275	0/1:13,2:13:20.62:172,0,21	1/1:15,1:14:39.99:414,40,0	1/1:11,0:11:20.81:205,21,0	0/0:12,0:12:10.52:0,11,108	0/0:9,0:9:21.01:0,21,212	0/0:13,0:12:29.80:0,30,265	0/1:8,1:8:20.52:65,0,21	0/0:14,0:13:10.02:0,10,91	0/0:21,0:19:7.28:0,7,117	0/0:19,0:15:9.80:0,10,92	1/1:4,9:13:33.30:335,33,0	1/1:13,1:13:22.49:231,22,0	1/1:4,4:7:11.88:137,12,0	0/1:8,0:6:12.12:21,0,12	0/0:16,0:15:19.52:0,20,194	0/0:7,0:4:8.38:0,8,63	0/1:13,0:11:4.67:79,0,5	1/1:22,0:21:45.08:409,45,0	1/1:18,0:18:17.74:158,18,0	1/1:7,3:9:26.94:318,27,0
chr10	56796046	.	A	AAAAG	445.47	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-2.881;DP=562;FS=0.000;HRun=0;HaplotypeScore=120.2649;InbreedingCoeff=0.7614;MQ=60.27;MQ0=5;MQRankSum=-0.397;QD=12.73;ReadPosRankSum=-2.118;VQSLOD=2.5067;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:90.19:0,90,1258	1/1:2,8:10:12.04:275,12,0	0/0:17,0:11:2.99:0,3,24	0/0:17,0:12:6.01:0,6,75	0/0:21,0:21:42.13:0,42,638	0/0:28,0:28:48.15:0,48,754	0/0:15,0:15:27.09:0,27,422	1/1:24,0:23:14.05:282,14,0	0/0:22,0:22:35.84:0,36,321	0/0:15,0:15:19.06:0,19,155	0/0:18,0:17:38.40:0,38,301	0/0:27,0:27:57.19:0,57,917	0/0:13,0:13:24.06:0,24,364	0/0:16,0:16:45.11:0,45,654	0/0:28,0:28:42.04:0,42,390	0/0:15,0:15:12.03:0,12,171	0/0:32,0:32:78.22:0,78,1178	0/0:25,0:25:42.66:0,43,858	0/0:18,0:15:26.39:0,26,196	0/0:25,0:25:47.71:0,48,408	0/0:11,0:11:5.88:0,6,36	0/0:17,0:17:33.10:0,33,506	0/0:14,0:14:15.05:0,15,243	0/0:30,0:30:60.19:0,60,942	0/0:16,0:16:23.90:0,24,204	0/0:21,0:21:47.78:0,48,424	0/0:23,0:23:41.95:0,42,376	0/0:3,0:3:9.02:0,9,96
chr10	56796064	.	AAGAAAG	A	8505.38	PASS	AB=0.545;AC=21;AF=0.375;AN=56;BaseQRankSum=13.571;DP=548;FS=1.229;HRun=0;HaplotypeScore=103.2238;InbreedingCoeff=0.8940;MQ=51.39;MQ0=13;MQRankSum=-9.305;QD=40.89;ReadPosRankSum=2.893;VQSLOD=4.8666;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,111,3101	0/0:10,0:10:21.06:0,21,463	0/0:10,0:3:9.03:0,9,118	0/0:17,0:4:12.04:0,12,256	0/0:21,0:21:54.17:0,54,1582	0/0:22,0:22:57.19:0,57,1762	0/0:13,0:13:36.55:0,37,978	0/0:31,0:29:78.18:0,78,1220	1/1:1,20:20:36.12:848,36,0	1/1:1,13:13:34.33:622,34,0	1/1:3,16:17:42.10:870,42,0	0/0:25,0:25:75.26:0,75,2385	0/0:9,0:9:24.07:0,24,751	0/0:17,0:17:51.17:0,51,1497	1/1:2,25:26:42.14:989,42,0	0/0:11,0:11:24.08:0,24,633	0/0:31,0:31:90.29:0,90,2684	0/0:26,0:26:72.24:0,72,2099	1/1:3,15:15:42.14:802,42,0	1/1:0,25:25:63.21:1311,63,0	1/1:1,12:12:6.02:93,6,0	0/0:21,0:21:54.18:0,54,1373	0/0:10,0:10:27.07:0,27,674	0/0:29,0:29:78.22:0,78,2388	1/1:1,15:16:27.09:555,27,0	1/1:1,25:26:69.17:1309,69,0	1/1:2,21:21:42.14:974,42,0	0/1:1,5:6:48.75:132,0,49
chr10	56796526	.	TA	T	1821.23	PASS	AB=0.941;AC=23;AF=0.442;AN=52;BaseQRankSum=8.260;DP=282;FS=17.599;HRun=7;HaplotypeScore=32.0067;InbreedingCoeff=0.7792;MQ=62.02;MQ0=2;MQRankSum=1.119;QD=16.71;ReadPosRankSum=-0.421;VQSLOD=1.6974;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:72.22:0,72,889	0/0:1,0:1:3.01:0,3,38	0/0:18,0:8:3.13:0,3,135	0/1:15,1:8:3.13:3,0,118	0/0:11,0:11:23.86:0,24,291	0/0:17,0:17:39.12:0,39,490	0/0:1,0:1:3.01:0,3,37	0/0:19,0:18:49.69:0,50,586	1/1:2,5:7:9.02:92,9,0	1/1:0,5:5:15.03:153,15,0	1/1:0,6:6:18.04:183,18,0	0/0:4,0:4:12.04:0,12,150	0/0:5,0:4:12.04:0,12,151	0/0:5,0:5:6.01:0,6,62	1/1:3,6:9:15.03:153,15,0	0/0:4,0:4:9.03:0,9,113	0/0:40,0:40:99:0,111,1369	0/0:18,0:18:51.16:0,51,641	1/1:2,17:19:51.11:520,51,0	1/1:1,4:5:9.02:90,9,0	1/1:0,3:3:9.02:92,9,0	./.	./.	0/0:2,0:2:6.02:0,6,75	1/1:2,9:11:24.05:245,24,0	1/1:3,6:9:18.03:183,18,0	1/1:4,5:9:9.02:91,9,0	1/1:3,7:10:21.05:214,21,0
chr10	56796801	.	T	TC	1859.43	PASS	AB=1.000;AC=23;AF=0.426;AN=54;BaseQRankSum=-0.198;DP=424;FS=19.425;HRun=4;HaplotypeScore=44.6225;InbreedingCoeff=0.8449;MQ=54.57;MQ0=40;MQRankSum=1.004;QD=11.84;ReadPosRankSum=-2.070;VQSLOD=0.2934;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:50.14:0,50,375	./.	0/0:43,0:4:8.99:0,9,78	0/0:36,0:10:5.55:0,6,46	0/0:14,0:14:14.81:0,15,112	0/0:9,0:9:14.90:0,15,119	0/0:13,0:13:32.68:0,33,238	1/1:14,0:11:29.19:237,29,0	1/1:13,0:13:21.22:150,21,0	0/1:8,0:7:7.67:46,0,8	1/1:13,0:13:25.97:180,26,0	0/0:7,0:7:2.97:0,3,24	0/0:5,0:5:8.91:0,9,64	0/0:5,0:5:8.88:0,9,76	1/1:10,0:10:17.90:141,18,0	0/0:10,0:10:23.51:0,24,176	0/0:31,0:30:41.47:0,41,318	0/0:21,0:21:44.62:0,45,325	1/1:3,12:15:38.80:313,39,0	1/1:9,0:9:11.96:94,12,0	1/1:11,0:11:17.96:146,18,0	0/0:10,0:10:20.99:0,21,180	0/0:16,0:16:11.98:0,12,107	0/0:19,0:19:29.83:0,30,238	1/1:7,0:6:11.63:80,12,0	1/1:10,4:14:26.21:215,26,0	1/1:16,0:17:34.71:242,35,0	1/1:26,0:22:18.66:227,19,0
chr10	56797317	.	A	AAC	1827.59	PASS	AB=0.943;AC=37;AF=0.740;AN=50;BaseQRankSum=4.022;DP=536;FS=0.840;HRun=0;HaplotypeScore=125.2889;InbreedingCoeff=0.2717;MQ=66.60;MQ0=5;MQRankSum=-2.515;QD=4.48;ReadPosRankSum=-1.962;VQSLOD=2.2676;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:27.03:0,27,282	1/1:6,1:6:8.88:83,9,0	./.	./.	0/0:18,0:18:21.04:0,21,222	1/1:25,0:25:16.99:153,17,0	1/1:27,0:28:4.79:29,5,0	1/1:19,0:19:3.01:39,3,0	1/1:15,1:15:12.26:101,12,0	0/1:15,2:16:17.31:158,0,17	1/1:8,0:8:3.01:44,3,0	1/1:22,0:22:5.83:67,6,0	0/0:14,0:16:14.86:0,15,145	0/0:8,0:8:3.01:0,3,33	0/1:25,1:25:22.32:22,0,54	1/1:25,0:26:20.05:153,20,0	1/1:18,0:18:11.37:76,11,0	1/1:11,1:13:6.48:73,6,0	1/1:17,0:16:17.95:175,18,0	1/1:13,0:11:8.21:56,8,0	0/1:33,2:33:32.67:33,0,73	./.	1/1:17,0:17:5.73:51,6,0	1/1:24,0:23:2.65:39,3,0	0/1:9,1:10:26.82:39,0,27	1/1:26,1:27:23.36:239,23,0	1/1:25,1:26:23.49:242,23,0	0/1:14,0:14:15.03:118,0,15
chr10	56797357	.	CGAATGAAT	C	3070.03	PASS	AC=28;AF=0.538;AN=52;BaseQRankSum=4.425;DP=495;FS=6.780;HRun=0;HaplotypeScore=147.8269;InbreedingCoeff=0.5837;MQ=42.25;MQ0=26;MQRankSum=-5.702;QD=11.81;ReadPosRankSum=2.586;VQSLOD=2.1381;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:58.19:0,58,2093	1/1:4,0:5:1.71:18,2,0	./.	./.	0/0:18,0:18:34.36:0,34,1204	1/1:8,13:23:3.01:43,3,0	0/0:7,4:12:1.72:0,2,4	1/1:21,0:20:5.94:41,6,0	1/1:7,6:15:6.19:102,6,0	1/1:12,11:24:30.06:699,30,0	0/0:2,6:10:0.89:0,1,2	1/1:7,12:21:8.16:225,8,0	0/0:22,0:22:30.10:0,30,1178	0/0:14,0:14:30.96:0,31,1135	1/1:4,5:19:9.03:173,9,0	1/1:9,9:24:4.19:87,4,0	1/1:9,7:17:5.99:96,6,0	1/1:8,4:12:2.66:75,3,0	1/1:12,8:20:24.04:549,24,0	0/0:10,7:14:1.77:0,2,4	0/0:14,2:25:0.89:0,1,2	0/0:3,7:9:0.47:0,0,1	0/0:7,4:12:0.47:0,0,1	0/0:5,7:15:0.78:0,1,1	0/0:5,13:19:0.94:0,1,2	1/1:13,11:27:30.06:607,30,0	1/1:11,6:19:5.93:222,6,0	1/1:4,4:11:12.04:283,12,0
chr10	56797676	.	G	GGAAAAAAAAGAAAAAAAAAAA	31835.78	PASS	AB=1.000;AC=33;AF=0.589;AN=56;BaseQRankSum=9.465;DP=475;FS=0.000;HRun=0;HaplotypeScore=276.1102;InbreedingCoeff=0.2050;MQ=53.88;MQ0=8;MQRankSum=-10.145;QD=90.44;ReadPosRankSum=0.653;VQSLOD=3.6399;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:93.25:0,93,4134	0/1:7,0:7:32.49:810,0,32	0/0:17,0:15:3.54:0,4,865	0/0:14,0:9:16.45:0,16,383	0/0:29,0:30:90.21:0,90,3427	0/1:18,0:18:42.62:3022,0,43	0/1:14,0:12:48.31:1380,0,48	0/1:28,0:25:99:1203,0,113	1/1:17,0:16:44.56:1591,45,0	1/1:18,0:17:38.27:1068,38,0	1/1:10,0:10:24.04:864,24,0	0/1:11,0:9:99:606,0,107	0/0:18,0:18:50.99:0,51,2160	0/0:11,0:12:36.01:0,36,1350	1/1:14,0:14:39.05:1329,39,0	0/1:9,0:9:58.04:792,0,58	0/1:17,0:16:10.89:1736,0,11	0/1:14,0:14:75.68:1620,0,76	1/1:22,0:19:42.66:1843,43,0	1/1:14,0:14:29.97:875,30,0	1/1:12,0:11:29.96:613,30,0	0/1:5,0:5:0.47:0,0,21	0/1:19,0:17:99:779,0,175	0/1:10,0:10:64.64:65,0,80	1/1:21,0:20:56.94:2226,57,0	1/1:26,0:26:72.20:3173,72,0	1/1:30,0:26:74.99:3997,75,0	1/1:9,5:16:30.06:2244,30,0
chr10	56797706	.	TTTTG	T	3117.45	PASS	AB=0.920;AC=20;AF=0.357;AN=56;BaseQRankSum=1.098;DP=431;FS=9.169;HRun=0;HaplotypeScore=85.0383;InbreedingCoeff=0.7888;MQ=60.51;MQ0=2;MQRankSum=-0.246;QD=23.62;ReadPosRankSum=-0.758;VQSLOD=2.4872;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:60.03:0,60,1301	0/0:7,0:7:21.07:0,21,493	0/0:29,0:22:27.09:0,27,614	0/0:18,0:14:9.03:0,9,217	0/0:34,0:34:87.30:0,87,2035	1/1:4,11:15:30.10:483,30,0	1/1:8,6:14:15.01:213,15,0	0/0:23,0:23:33.10:0,33,732	0/1:10,1:11:24.24:24,0,473	0/0:22,0:22:63.22:0,63,1495	0/0:11,0:11:27.09:0,27,629	1/1:2,4:6:6.02:97,6,0	0/0:16,0:16:42.14:0,42,963	0/0:13,0:13:33.11:0,33,777	0/0:8,0:8:18.06:0,18,384	1/1:2,8:10:24.08:387,24,0	1/1:6,14:20:32.98:531,33,0	1/1:1,6:7:15.05:242,15,0	0/0:23,0:22:21.07:0,21,500	0/1:11,1:12:12.21:12,0,752	0/0:2,0:2:3.01:0,3,72	1/1:1,11:12:30.06:455,30,0	1/1:2,7:9:21.07:338,21,0	1/1:4,12:16:35.86:544,36,0	0/0:14,0:14:33.11:0,33,774	0/0:15,0:15:33.11:0,33,720	0/0:24,0:23:54.15:0,54,1241	0/0:10,0:10:15.05:0,15,324
chr10	56798321	.	T	TTTTA	878.58	PASS	AB=1.000;AC=17;AF=0.500;AN=34;BaseQRankSum=-4.085;DP=317;FS=5.853;HRun=0;HaplotypeScore=59.4751;InbreedingCoeff=0.4551;MQ=70.93;MQ0=1;MQRankSum=-0.699;QD=8.79;ReadPosRankSum=-2.265;VQSLOD=1.2680;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:13:5.37:0,5,36	./.	./.	./.	0/0:8,0:10:2.92:0,3,28	0/0:8,0:12:9.01:0,9,84	./.	./.	1/1:7,0:7:3.01:57,3,0	1/1:13,0:13:5.92:39,6,0	./.	0/0:9,0:10:3:0,3,28	0/0:7,0:9:6.01:0,6,56	0/0:10,0:10:0:0,0,0	1/1:6,1:7:3.01:69,3,0	0/0:9,0:10:3:0,3,28	./.	0/0:13,0:18:3:0,3,28	1/1:16,2:19:9.02:163,9,0	./.	1/1:7,0:7:3.01:48,3,0	./.	0/1:7,0:8:4.09:4,0,22	./.	1/1:9,4:13:6.02:138,6,0	1/1:8,3:11:9.03:207,9,0	./.	1/1:9,6:15:12.04:276,12,0
chr10	56798542	.	T	TGG	218.87	PASS	AB=0.965;AC=8;AF=0.148;AN=54;BaseQRankSum=1.011;DP=444;FS=42.583;HRun=0;HaplotypeScore=69.4869;InbreedingCoeff=-0.0785;MQ=43.42;MQ0=92;MQRankSum=1.417;QD=1.66;ReadPosRankSum=2.605;VQSLOD=-0.4027;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:34:66.20:0,66,852	./.	0/0:21,0:7:14.67:0,15,140	0/0:14,0:7:9.77:0,10,96	0/0:11,0:9:21.06:0,21,260	0/1:6,0:3:11.43:11,0,31	0/0:20,0:18:22.32:0,22,211	0/0:41,0:35:78.45:0,78,1000	0/0:9,0:8:20.97:0,21,235	0/0:14,0:10:17.97:0,18,195	0/0:13,0:11:14.29:0,14,216	0/1:12,0:11:6.64:7,0,68	0/0:10,0:8:21.06:0,21,257	0/0:4,0:4:9.03:0,9,139	0/0:9,0:7:17.04:0,17,164	0/1:14,0:11:60.63:61,0,83	0/1:32,0:23:82.23:104,0,82	0/1:24,0:17:10.85:11,0,176	0/0:22,0:14:42.07:0,42,499	0/0:6,0:6:17.91:0,18,158	0/0:15,0:12:28.30:0,28,320	0/1:11,0:8:20.88:80,0,21	0/1:7,0:5:25.41:28,0,25	0/1:16,9:23:2.12:47,0,2	0/0:18,0:10:24.79:0,25,214	0/0:5,0:4:12.02:0,12,144	0/0:10,0:8:14.52:0,15,173	0/0:19,0:10:20.09:0,20,236
chr10	56798546	.	T	TGG	203.14	PASS	AB=0.914;AC=10;AF=0.185;AN=54;BaseQRankSum=0.581;DP=421;FS=45.482;HRun=0;HaplotypeScore=60.8543;InbreedingCoeff=0.1045;MQ=39.70;MQ0=92;MQRankSum=1.792;QD=2.42;ReadPosRankSum=2.406;VQSLOD=-0.3689;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:35:66.10:0,66,812	./.	0/0:17,0:5:9.49:0,9,100	0/0:13,0:5:1.14:0,1,86	0/0:11,0:9:19.87:0,20,191	0/0:7,0:4:6.22:0,6,48	0/0:20,0:18:32.63:0,33,303	0/0:36,0:31:73.33:0,73,884	0/0:7,0:6:0.25:0,0,95	0/1:8,2:7:32.42:46,0,32	0/1:12,1:11:52.33:98,0,52	0/0:16,0:15:26.69:0,27,276	0/0:10,0:8:21.05:0,21,243	0/0:4,0:4:9.03:0,9,135	0/1:9,0:7:29.08:29,0,85	0/0:13,0:10:14.93:0,15,158	0/0:30,0:21:50.11:0,50,431	0/0:24,0:18:32.48:0,32,328	0/0:20,0:12:20.53:0,21,325	0/1:5,0:5:5.76:6,0,50	0/0:14,0:11:21.70:0,22,211	0/0:10,0:7:7.30:0,7,28	0/0:7,0:5:10.90:0,11,52	0/0:27,0:24:13.31:0,13,174	1/1:13,1:6:12.20:96,12,0	1/1:4,0:3:2.46:11,2,0	0/1:7,1:7:35.49:43,0,35	0/1:18,1:10:11.07:11,0,146
chr10	56800183	.	CCCTTTCCTTTCCTTTCCTTT	C	6050.40	PASS	AC=18;AF=0.346;AN=52;BaseQRankSum=8.941;DP=647;FS=4.972;HRun=0;HaplotypeScore=287.2134;InbreedingCoeff=0.8624;MQ=54.06;MQ0=24;MQRankSum=-6.413;QD=32.01;ReadPosRankSum=-1.989;VQSLOD=3.0940;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:69.24:0,69,4992	0/0:9,0:9:21.07:0,21,1608	./.	0/0:61,0:19:2.88:0,3,16	0/0:18,0:18:42.14:0,42,3310	0/0:18,0:18:33.11:0,33,2287	0/0:21,0:21:39.13:0,39,2195	0/0:34,0:28:9.03:0,9,342	1/1:16,3:19:3.01:156,3,0	1/1:14,10:24:30.07:1036,30,0	1/1:12,7:19:12.04:505,12,0	0/0:23,0:23:51.16:0,51,3941	0/0:9,0:9:18.06:0,18,1250	0/0:8,0:8:12.04:0,12,1108	1/1:13,8:21:18.06:911,18,0	0/0:24,0:24:48.16:0,48,3803	0/0:21,0:29:48.16:0,48,2217	0/0:13,0:21:27.09:0,27,1549	1/1:10,5:13:15.04:628,15,0	1/1:12,13:25:24.04:1114,24,0	0/0:20,4:24:4.66:0,5,13	0/0:18,0:18:30.10:0,30,2351	0/0:20,0:20:30.10:0,30,2058	0/0:35,0:35:70.79:0,71,5737	1/1:14,5:19:6.02:277,6,0	1/1:15,12:27:30.02:1107,30,0	1/1:14,6:20:6.02:317,6,0	./.
chr10	56800613	.	C	CATTT	14722.88	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-12.870;DP=621;FS=10.276;HRun=0;HaplotypeScore=87.8217;InbreedingCoeff=0.9734;MQ=71.76;MQ0=1;MQRankSum=-7.353;QD=49.91;ReadPosRankSum=-1.407;VQSLOD=4.8823;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:81.28:0,81,1414	1/1:3,5:8:18.06:423,18,0	0/0:12,0:12:18.06:0,18,314	0/0:15,0:15:30.09:0,30,456	0/0:31,0:31:78.24:0,78,1309	0/0:33,0:33:87.28:0,87,1498	0/0:20,0:20:51.13:0,51,809	1/1:8,18:27:60.16:1370,60,0	1/1:5,23:28:57.20:1424,57,0	1/1:9,22:30:67.46:1630,67,0	1/1:4,17:22:51.05:1070,51,0	0/0:18,0:18:45.14:0,45,767	0/0:19,0:19:51.17:0,51,901	0/0:24,0:24:57.20:0,57,996	1/1:5,25:32:75.26:1815,75,0	0/0:20,0:20:57.15:0,57,903	0/0:26,0:26:60.17:0,60,983	0/0:11,0:11:23.98:0,24,330	1/1:10,13:23:51.07:993,51,0	1/1:2,17:21:57.06:1300,57,0	1/1:8,15:25:48.16:1195,48,0	0/0:23,0:23:60.19:0,60,1026	0/0:20,0:20:41.79:0,42,683	0/0:23,0:23:60.21:0,60,1030	1/1:7,15:23:42.14:1040,42,0	1/1:8,14:22:42.14:1034,42,0	1/1:9,16:27:54.19:1354,54,0	1/1:0,5:5:3.01:77,3,0
chr10	56801314	.	C	CTT	2805.14	PASS	AB=0.715;AC=32;AF=0.593;AN=54;BaseQRankSum=-2.215;DP=475;FS=0.512;HRun=14;HaplotypeScore=61.3449;InbreedingCoeff=0.2984;MQ=63.20;MQ0=10;MQRankSum=-1.373;QD=7.90;ReadPosRankSum=0.209;VQSLOD=0.4362;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:28:37.80:0,38,335	0/0:0,0:3:5.34:0,5,22	0/1:35,0:16:29.55:30,0,83	0/0:25,0:9:5.40:0,5,26	0/0:16,0:16:7.21:0,7,164	0/1:3,1:15:7.89:49,0,8	0/1:5,0:20:32.67:43,0,33	0/0:9,0:19:23.76:0,24,99	1/1:5,12:18:15.05:196,15,0	1/1:8,2:13:22.74:203,23,0	1/1:11,1:13:21.38:170,21,0	0/1:7,0:12:16.95:26,0,17	0/0:13,0:15:26.50:0,27,212	0/0:13,0:14:35.41:0,35,268	0/1:10,2:11:15.55:70,0,16	0/1:6,0:9:5.54:66,0,6	1/1:5,1:25:2.24:90,2,0	0/1:13,0:21:40.12:51,0,40	1/1:9,11:20:41.59:439,42,0	1/1:1,9:11:18.05:220,18,0	1/1:7,10:18:4.65:258,5,0	./.	1/1:5,0:11:13.50:49,13,0	0/1:4,1:19:7.63:33,0,8	1/1:3,7:10:6.01:68,6,0	1/1:9,15:25:41.97:442,42,0	1/1:23,6:28:42.08:431,42,0	1/1:3,4:8:7.75:55,8,0
chr10	56801587	.	AAAGAAGAAGAAG	A	830.29	PASS	AB=1.000;AC=23;AF=0.575;AN=40;BaseQRankSum=2.288;DP=253;FS=1.317;HRun=0;HaplotypeScore=80.5027;InbreedingCoeff=0.3538;MQ=64.33;MQ0=19;MQRankSum=-2.396;QD=6.86;ReadPosRankSum=0.799;VQSLOD=0.9895;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:13:15.05:0,15,397	0/0:4,0:4:5.97:0,6,46	./.	./.	0/0:3,0:3:9.03:0,9,257	./.	0/1:17,0:17:12.63:13,0,102	./.	1/1:6,0:6:6.02:137,6,0	1/1:9,2:10:3.01:50,3,0	./.	0/0:9,0:9:5.78:0,6,80	0/0:9,0:9:6.02:0,6,202	0/0:6,0:6:9.03:0,9,303	./.	0/0:11,0:11:12.04:0,12,209	1/1:11,0:10:5.97:59,6,0	1/1:8,0:7:5.95:42,6,0	./.	1/1:6,4:9:3.01:54,3,0	0/1:13,0:13:17.94:56,0,18	1/1:3,0:2:3.01:46,3,0	1/1:3,0:3:1.25:3,1,0	0/1:14,0:12:31.93:119,0,32	1/1:3,0:3:3.01:47,3,0	1/1:11,3:12:5.54:165,6,0	1/1:8,0:8:8.99:182,9,0	./.
chr10	56802796	.	TTG	T	1013.77	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.735;DP=518;FS=3.010;HRun=0;HaplotypeScore=63.9727;InbreedingCoeff=0.9241;MQ=58.13;MQ0=2;MQRankSum=0.398;QD=33.79;ReadPosRankSum=-1.392;VQSLOD=5.2884;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,117,2111	1/1:1,3:4:6.02:86,6,0	0/0:27,0:23:66.20:0,66,1150	0/0:21,0:17:47.94:0,48,768	0/0:15,0:15:42.10:0,42,695	0/0:9,0:9:27.09:0,27,495	0/0:21,0:21:60.18:0,60,1066	1/1:1,25:26:75.23:1039,75,0	0/0:16,0:16:42.14:0,42,770	0/0:16,0:16:48.16:0,48,849	0/0:11,0:11:33.11:0,33,592	0/0:8,0:8:24.07:0,24,409	0/0:21,0:21:63.17:0,63,1051	0/0:18,0:18:42.14:0,42,762	0/0:24,0:24:72.23:0,72,1278	0/0:21,0:21:57.20:0,57,1039	0/0:25,0:25:72.25:0,72,1273	0/0:23,0:23:63.22:0,63,1125	0/0:16,0:16:45.15:0,45,773	0/0:12,0:12:36.12:0,36,660	0/0:47,0:47:99:0,138,2431	0/0:14,0:14:42.14:0,42,760	0/0:19,0:19:57.17:0,57,1012	0/0:25,0:25:72.23:0,72,1282	0/0:4,0:4:12.04:0,12,220	0/0:13,0:13:36.12:0,36,645	0/0:15,0:15:42.14:0,42,769	0/0:7,0:7:21.07:0,21,339
chr10	56803441	.	GCA	G	6291.21	PASS	AB=0.911;AC=30;AF=0.536;AN=56;BaseQRankSum=12.446;DP=625;FS=9.719;HRun=0;HaplotypeScore=76.6264;InbreedingCoeff=0.7152;MQ=58.79;MQ0=1;MQRankSum=1.351;QD=18.13;ReadPosRankSum=2.439;VQSLOD=4.5245;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:70.21:0,70,1185	1/1:3,4:8:11.87:125,12,0	0/0:26,0:14:32.89:0,33,442	0/0:29,0:21:50.81:0,51,710	0/1:12,1:13:3.81:4,0,432	0/0:26,0:25:66.21:0,66,1034	0/0:32,1:33:47.79:0,48,1230	1/1:9,12:21:33.07:379,33,0	1/1:2,31:33:69.22:849,69,0	1/1:2,17:20:54:638,54,0	1/1:2,6:8:12.04:148,12,0	0/0:32,0:32:96.24:0,96,1410	0/0:18,0:18:36.11:0,36,559	0/1:24,2:26:4.51:5,0,909	1/1:3,22:25:57.18:701,57,0	0/0:23,1:24:12.08:0,12,830	0/0:26,1:27:29.30:0,29,939	0/0:25,0:25:51.17:0,51,831	1/1:4,12:17:30.09:368,30,0	1/1:0,11:11:24.08:295,24,0	1/1:7,54:61:99:1402,114,0	0/0:10,0:10:27.05:0,27,367	0/1:10,2:12:37.73:38,0,429	0/1:36,3:39:29.44:29,0,1082	1/1:3,9:14:26.92:309,27,0	1/1:4,21:25:63.13:743,63,0	1/1:2,7:9:18.06:221,18,0	1/1:4,1:5:3.01:37,3,0
chr10	56804083	.	GTACA	G	5017.65	PASS	AB=0.803;AC=38;AF=0.826;AN=46;BaseQRankSum=2.400;DP=681;FS=2.184;HRun=0;HaplotypeScore=115.5449;InbreedingCoeff=0.1640;MQ=66.01;MQ0=8;MQRankSum=1.568;QD=8.83;ReadPosRankSum=0.026;VQSLOD=3.4459;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:23,23:46:17.62:526,18,0	0/1:6,0:6:0:0,0,0	./.	./.	1/1:10,11:21:4.69:226,5,0	1/1:11,0:24:8.98:75,9,0	1/1:16,0:16:0.47:1,0,0	0/1:32,0:32:0:0,0,0	1/1:5,8:13:18.06:276,18,0	1/1:11,13:24:41.31:554,41,0	1/1:10,7:17:9.46:113,9,0	0/1:11,0:29:8.98:44,0,9	0/1:17,1:18:21.97:22,0,435	0/1:20,1:21:18.95:19,0,525	1/1:12,9:19:15.05:229,15,0	1/1:9,0:24:8.52:79,9,0	0/1:22,0:36:0:1,0,0	0/1:11,0:26:21.84:22,0,39	1/1:17,10:27:27.08:391,27,0	1/1:8,18:26:29.90:404,30,0	1/1:27,27:54:54.18:829,54,0	./.	0/1:3,0:15:0:0,0,0	./.	1/1:9,9:18:18.06:276,18,0	1/1:15,17:31:48.16:727,48,0	1/1:10,11:20:15.01:204,15,0	./.
chr10	56804539	.	T	TA	692.27	PASS	AB=0.896;AC=35;AF=0.673;AN=52;BaseQRankSum=3.183;DP=195;FS=2.306;HRun=16;HaplotypeScore=60.0335;InbreedingCoeff=0.3142;MQ=36.17;MQ0=28;MQRankSum=-2.266;QD=4.35;ReadPosRankSum=-1.937;VQSLOD=0.6457;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:7:2.78:0,3,17	0/0:8,0:8:7:0,7,47	0/1:5,0:2:0:0,0,0	0/0:8,0:3:1.62:0,2,5	0/0:10,0:10:11.59:0,12,66	0/1:4,2:6:1.87:71,0,2	1/1:0,1:1:2.99:24,3,0	0/1:15,2:7:9.01:18,0,9	1/1:4,0:2:1.55:4,2,0	1/1:10,0:10:3.91:47,4,0	1/1:8,1:10:11.25:76,11,0	1/1:4,0:3:2.68:11,3,0	0/1:6,1:8:7.44:16,0,7	0/0:2,0:2:2.92:0,3,17	1/1:3,0:3:4.61:18,5,0	0/1:4,1:5:9.89:19,0,10	1/1:4,3:6:11.82:86,12,0	0/1:8,1:6:1.57:2,0,12	1/1:2,0:5:11.51:61,12,0	1/1:7,1:9:14.11:77,14,0	./.	./.	0/1:2,0:2:0:0,0,0	1/1:1,1:2:5.99:48,6,0	1/1:6,0:9:17.09:87,17,0	1/1:14,0:13:16.75:83,17,0	1/1:8,0:7:4.94:23,5,0	1/1:13,0:11:12.11:60,12,0
chr10	56804595	.	TTTTTG	T	552.56	PASS	AB=0.933;AC=13;AF=0.260;AN=50;BaseQRankSum=4.236;DP=189;FS=4.539;HRun=0;HaplotypeScore=47.9204;InbreedingCoeff=0.3073;MQ=49.39;MQ0=23;MQRankSum=-4.392;QD=8.50;ReadPosRankSum=2.235;VQSLOD=0.5829;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:20.84:0,21,288	0/0:8,0:7:14.96:0,15,142	0/0:7,0:1:2.22:0,2,7	0/0:9,0:3:3.01:0,3,39	0/0:11,0:8:23.27:0,23,285	0/0:7,0:6:14.99:0,15,276	0/0:3,0:3:5.99:0,6,73	0/0:16,0:12:25.58:0,26,320	1/1:1,0:1:2.99:23,3,0	1/1:7,0:5:14.79:110,15,0	0/1:7,0:7:9.83:34,0,10	0/0:4,0:3:5.88:0,6,36	0/0:5,0:4:8.97:0,9,115	0/0:4,0:4:6.02:0,6,148	./.	./.	0/0:15,0:11:27.09:0,27,458	0/0:9,0:4:9.01:0,9,140	0/0:3,0:2:0:0,0,0	1/1:14,1:13:27:210,27,0	0/1:4,1:3:9.95:62,0,10	./.	0/0:5,0:5:11.87:0,12,243	0/0:6,0:5:12.50:0,13,157	0/1:8,2:8:33.09:170,0,33	0/1:4,0:4:11.61:27,0,12	0/1:7,0:7:18.27:18,0,20	1/1:9,0:7:4.04:49,4,0
chr10	56804604	.	CT	C	1122.49	PASS	AB=0.818;AC=33;AF=0.717;AN=46;BaseQRankSum=2.043;DP=184;FS=0.000;HRun=8;HaplotypeScore=34.9539;InbreedingCoeff=0.4960;MQ=40.40;MQ0=22;MQRankSum=-2.960;QD=8.44;ReadPosRankSum=-0.528;VQSLOD=-0.2026;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:17.95:0,18,196	./.	./.	./.	0/0:14,0:11:22.88:0,23,259	1/1:1,4:4:8.96:77,9,0	0/0:1,1:2:0:0,0,0	1/1:8,0:4:2.63:17,3,0	1/1:0,4:4:9.01:87,9,0	1/1:9,1:8:11.92:97,12,0	1/1:1,9:10:15.02:144,15,0	1/1:2,2:2:6.01:58,6,0	0/0:3,0:2:3.01:0,3,36	0/0:4,0:4:5.95:0,6,54	1/1:0,2:2:3:29,3,0	1/1:1,3:3:9.01:86,9,0	0/1:14,4:15:1.50:47,0,2	1/1:8,0:4:2.96:21,3,0	./.	1/1:8,8:14:20.76:202,21,0	0/0:4,1:3:0:0,0,0	./.	1/1:2,2:4:3:29,3,0	1/1:4,1:4:1.65:26,2,0	1/1:6,4:8:11.84:115,12,0	1/1:2,4:6:6.01:58,6,0	1/1:4,5:9:8.99:87,9,0	1/1:5,4:7:8.92:75,9,0
chr10	56804837	.	C	CACCTTCAGAGTTTTA	8258.60	PASS	AB=0.833;AC=21;AF=0.375;AN=56;BaseQRankSum=1.809;DP=347;FS=22.729;HRun=0;HaplotypeScore=120.3120;InbreedingCoeff=0.8284;MQ=59.03;MQ0=25;MQRankSum=-8.968;QD=127.06;ReadPosRankSum=-2.039;VQSLOD=2.8405;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:26:69.24:0,69,2963	0/0:2,0:2:6.02:0,6,221	0/0:15,0:9:23.44:0,23,762	0/0:15,0:10:24.08:0,24,968	0/0:15,0:14:39.12:0,39,1447	0/0:20,0:20:60.14:0,60,2579	0/0:22,0:22:60.21:0,60,2558	0/0:15,0:13:33.07:0,33,979	1/1:3,2:2:6.02:458,6,0	1/1:3,1:4:9.03:656,9,0	1/1:3,0:3:9.03:519,9,0	0/0:20,0:19:54.18:0,54,2358	0/0:8,0:7:21.07:0,21,925	0/0:13,0:13:36.12:0,36,1637	1/1:4,1:5:15.05:923,15,0	0/0:20,0:19:39.09:0,39,1549	0/0:31,0:28:69.24:0,69,3051	0/0:21,0:17:51.17:0,51,2032	1/1:2,3:6:18.06:927,18,0	1/1:2,1:3:9.03:687,9,0	0/1:8,1:7:20.71:383,0,21	0/0:8,0:8:24.08:0,24,1109	0/0:5,0:5:15.05:0,15,697	0/0:23,0:21:60.21:0,60,2639	1/1:1,0:1:3.01:172,3,0	1/1:6,2:8:24.08:1617,24,0	1/1:5,1:5:15.05:968,15,0	1/1:6,3:8:15.05:949,15,0
chr10	56805206	.	CT	C	443.02	PASS	AB=0.833;AC=5;AF=0.089;AN=56;BaseQRankSum=-1.750;DP=275;FS=31.717;HRun=14;HaplotypeScore=52.4533;InbreedingCoeff=0.3852;MQ=80.98;MQ0=14;MQRankSum=-0.311;QD=9.43;ReadPosRankSum=4.021;VQSLOD=0.5606;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:13,3:16:0.30:0,0,129	0/0:2,0:2:3:0,3,28	0/0:26,0:14:11.13:0,11,57	0/0:17,0:16:8.03:0,8,46	0/0:11,0:11:23.97:0,24,213	0/0:11,0:11:12.01:0,12,111	0/0:4,0:4:2.99:0,3,23	0/0:24,0:22:32.83:0,33,279	0/0:4,0:7:8.52:0,9,43	0/0:4,0:5:4.09:0,4,17	0/0:3,0:3:2.92:0,3,17	0/0:4,0:4:9.01:0,9,84	0/0:4,0:4:12.01:0,12,111	0/0:5,0:5:11.97:0,12,103	0/0:3,0:5:14.37:0,14,77	0/0:4,0:3:6.01:0,6,56	1/1:6,14:19:46.57:308,47,0	1/1:11,10:20:35.54:244,36,0	0/0:8,0:11:22.89:0,23,121	0/0:5,0:8:8.52:0,9,43	0/0:5,0:4:0.47:0,0,1	0/0:3,0:3:3:0,3,28	0/0:3,0:3:2.99:0,3,23	0/1:4,1:5:14.82:15,0,22	0/0:8,0:9:14.52:0,15,84	0/0:5,0:5:11.54:0,12,64	0/0:6,0:8:11.53:0,12,62	0/0:15,0:18:28.58:0,29,149
chr10	56805224	.	G	GATTT	1757.06	PASS	AC=26;AF=0.813;AN=32;BaseQRankSum=0.773;DP=188;FS=0.000;HRun=0;HaplotypeScore=41.1473;InbreedingCoeff=0.4594;MQ=52.63;MQ0=18;MQRankSum=-2.570;QD=14.17;ReadPosRankSum=-0.126;VQSLOD=2.4617;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:12.04:0,12,189	1/1:0,2:2:3.01:71,3,0	./.	./.	0/0:7,0:7:3.01:0,3,47	1/1:2,6:8:9.03:214,9,0	./.	1/1:25,0:19:5.98:91,6,0	./.	./.	./.	1/1:1,1:2:3.01:71,3,0	./.	0/0:5,0:5:3.01:0,3,47	1/1:7,0:6:8.91:62,9,0	1/1:3,1:3:3.01:70,3,0	1/1:15,6:18:21.07:441,21,0	1/1:12,8:18:15.05:338,15,0	./.	1/1:2,0:3:3.01:52,3,0	./.	./.	./.	1/1:4,1:5:3:33,3,0	1/1:5,0:7:5.56:102,6,0	./.	1/1:5,0:5:12:148,12,0	1/1:11,0:10:15:172,15,0
chr10	56805547	.	CG	C	128.30	PASS	AB=0.600;AC=7;AF=0.184;AN=38;BaseQRankSum=4.670;DP=271;FS=3.906;HRun=3;HaplotypeScore=37.0811;InbreedingCoeff=0.6249;MQ=40.32;MQ0=23;MQRankSum=-4.108;QD=7.55;ReadPosRankSum=0.120;VQSLOD=0.6360;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,1:32:26.09:0,26,820	0/0:6,0:6:18.06:0,18,256	./.	./.	0/0:11,0:11:24.08:0,24,342	0/0:17,0:15:36.11:0,36,499	0/0:16,0:12:24.03:0,24,304	0/0:20,0:10:27.01:0,27,325	0/1:2,4:4:31.07:88,0,31	./.	1/1:0,1:1:3.01:37,3,0	0/0:15,0:14:24.06:0,24,326	0/0:7,0:7:15.01:0,15,188	0/0:10,0:10:23.91:0,24,343	./.	0/0:11,0:11:27.09:0,27,385	0/0:30,0:25:39.09:0,39,536	0/0:18,0:12:24.08:0,24,345	./.	./.	1/1:0,4:3:5.05:43,5,0	0/0:6,0:6:8.99:0,9,90	0/0:6,0:5:12.04:0,12,172	0/0:22,0:20:51.09:0,51,687	./.	1/1:1,4:2:6.02:74,6,0	./.	./.
chr10	56806039	.	TATAAATAAATAAATAAATAAATAA	T	3915.68	PASS	AC=18;AF=0.429;AN=42;BaseQRankSum=3.677;DP=275;FS=10.576;HRun=0;HaplotypeScore=166.0876;InbreedingCoeff=0.6415;MQ=64.22;MQ0=1;MQRankSum=-2.972;QD=35.60;ReadPosRankSum=1.440;VQSLOD=1.8210;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:17:28.64:0,29,1872	./.	./.	./.	0/0:9,0:9:6.02:0,6,395	0/0:8,0:12:21.06:0,21,998	0/0:3,0:5:3.01:0,3,157	0/0:23,0:22:21.07:0,21,1168	1/1:4,2:6:6.02:375,6,0	1/1:11,6:17:18.04:802,18,0	1/1:10,1:11:3.01:188,3,0	0/0:4,0:4:3.01:0,3,204	0/0:4,0:4:3.01:0,3,332	0/0:9,0:9:6.02:0,6,469	1/1:4,0:5:3.01:168,3,0	0/0:6,0:7:3.01:0,3,153	0/0:11,0:16:24.03:0,24,543	0/0:11,0:15:9.03:0,9,213	1/1:9,6:15:18.05:540,18,0	./.	./.	0/0:2,0:3:3.01:0,3,175	./.	./.	1/1:11,2:14:6.02:355,6,0	1/1:7,3:10:9.03:563,9,0	1/1:9,3:12:6.02:375,6,0	1/1:13,7:20:9.03:550,9,0
chr10	56806214	.	G	GA	2976.72	PASS	AB=0.596;AC=19;AF=0.339;AN=56;BaseQRankSum=-8.047;DP=429;FS=3.428;HRun=10;HaplotypeScore=45.3663;InbreedingCoeff=0.7459;MQ=59.18;MQ0=3;MQRankSum=0.989;QD=17.93;ReadPosRankSum=0.940;VQSLOD=4.0433;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:30:67.91:0,68,547	0/0:2,0:2:2.96:0,3,20	0/0:5,0:4:11.98:0,12,98	0/0:3,0:3:5.99:0,6,49	0/0:14,0:15:28.98:0,29,227	0/0:15,0:15:29.92:0,30,246	0/0:22,0:22:56.90:0,57,465	0/0:30,0:29:69.79:0,70,566	1/1:3,7:10:18:179,18,0	1/1:4,12:16:14.46:359,14,0	0/1:1,7:9:3.12:171,0,3	0/0:10,0:10:26.97:0,27,222	0/0:10,0:10:26.95:0,27,222	0/0:19,0:19:35.90:0,36,295	1/1:5,14:18:30.08:320,30,0	0/0:12,0:12:29.95:0,30,246	0/0:32,0:33:76.41:0,76,620	0/0:21,0:21:47.92:0,48,394	1/1:7,8:14:26.93:261,27,0	1/1:2,7:10:17.84:162,18,0	1/1:1,27:28:66.17:704,66,0	0/0:9,0:8:17.97:0,18,148	0/0:7,0:8:20:0,20,154	0/0:18,0:18:10.41:0,10,307	0/1:8,10:18:15.73:244,0,16	1/1:3,15:18:45.11:479,45,0	1/1:3,12:15:14.83:160,15,0	0/1:3,5:8:6.60:142,0,7
chr10	56806876	.	G	GACC	12839.12	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-15.885;DP=719;FS=0.000;HRun=0;HaplotypeScore=93.0420;InbreedingCoeff=0.9989;MQ=72.84;MQ0=0;MQRankSum=-1.057;QD=53.27;ReadPosRankSum=1.195;VQSLOD=6.5895;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,138,2188	0/0:9,0:9:24.08:0,24,375	0/0:13,0:12:21.54:0,22,330	0/0:17,0:17:33.33:0,33,592	0/0:24,0:24:66.18:0,66,1008	1/1:0,16:17:48.16:1049,48,0	1/1:1,24:27:63.22:1376,63,0	0/0:29,0:29:57.15:0,57,881	0/0:28,0:28:84.29:0,84,1327	0/0:33,0:33:93.32:0,93,1475	0/0:20,0:20:60.20:0,60,952	1/1:5,21:26:66.23:1440,66,0	0/0:18,0:18:51.17:0,51,809	0/0:19,0:19:57.19:0,57,904	0/0:27,0:27:69.24:0,69,1094	1/1:2,24:26:75.21:1594,75,0	1/1:4,35:40:96.05:2098,96,0	1/1:7,22:30:60.16:1266,60,0	0/0:21,0:21:45.15:0,45,705	0/0:27,0:27:81.25:0,81,1236	0/0:39,0:39:99:0,105,1652	1/1:1,27:28:69.19:1460,69,0	1/1:2,23:25:66.23:1442,66,0	1/1:3,19:22:51.18:1114,51,0	0/0:21,0:21:57.17:0,57,879	0/0:36,0:36:99:0,105,1665	0/0:41,0:41:99:0,114,1801	0/0:10,0:10:27.09:0,27,428
chr10	56808214	.	TAAC	T	9339.78	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=15.912;DP=764;FS=15.885;HRun=0;HaplotypeScore=112.9386;InbreedingCoeff=0.9988;MQ=64.43;MQ0=0;MQRankSum=-0.713;QD=31.77;ReadPosRankSum=2.170;VQSLOD=4.3978;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:96.28:0,96,1851	0/0:13,0:13:27.09:0,27,539	0/0:25,0:23:40.79:0,41,758	0/0:19,0:20:24.74:0,25,483	0/0:30,0:30:72.25:0,72,1467	0/0:20,0:20:51.16:0,51,986	0/0:29,0:29:72.23:0,72,1427	0/0:39,0:39:78.25:0,78,1531	1/1:6,29:35:75.18:1065,75,0	1/1:5,32:37:96.31:1376,96,0	1/1:2,28:30:75.08:1037,75,0	0/0:25,0:25:75.23:0,75,1458	0/0:24,0:24:54.19:0,54,1088	0/0:22,0:22:42.14:0,42,863	1/1:5,30:35:84.15:1163,84,0	0/0:35,0:34:93.30:0,93,1835	0/0:34,0:34:90.13:0,90,1735	0/0:28,0:28:70.44:0,70,1356	1/1:9,12:21:33.04:448,33,0	1/1:0,14:14:42.14:604,42,0	1/1:9,11:20:20.35:304,20,0	0/0:25,0:25:66.21:0,66,1301	0/0:21,0:21:54.19:0,54,1107	0/0:37,0:36:84.28:0,84,1664	1/1:5,18:23:51.17:742,51,0	1/1:3,33:36:99:1423,99,0	1/1:8,23:31:47.71:698,48,0	1/1:0,12:12:33.11:480,33,0
chr10	56808888	.	TA	T	4553.68	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=8.474;DP=493;FS=0.000;HRun=9;HaplotypeScore=90.1256;InbreedingCoeff=0.8943;MQ=67.85;MQ0=5;MQRankSum=-2.001;QD=19.30;ReadPosRankSum=1.051;VQSLOD=5.0087;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:69.19:0,69,786	0/0:9,0:9:20.85:0,21,225	0/1:41,0:14:15.89:16,0,104	0/0:34,1:15:9.77:0,10,109	0/0:20,0:20:50.53:0,51,570	0/0:17,0:17:48.14:0,48,554	0/0:9,0:9:27.08:0,27,311	0/0:27,0:25:63.16:0,63,715	1/1:5,4:9:23.90:202,24,0	1/1:5,27:32:81.02:734,81,0	1/1:0,14:14:41.67:349,42,0	0/0:11,0:11:29.96:0,30,327	0/0:15,0:15:45.13:0,45,519	0/0:4,0:4:12.04:0,12,138	1/1:5,12:17:42.01:384,42,0	0/0:13,0:13:39.12:0,39,449	0/0:22,0:22:57.14:0,57,635	0/0:18,0:18:28.65:0,29,502	1/1:1,16:15:39.02:357,39,0	1/1:4,25:29:71.96:649,72,0	1/1:2,6:8:15:137,15,0	0/0:2,0:2:6.02:0,6,69	0/0:14,0:14:33.10:0,33,381	0/0:14,0:14:36.10:0,36,410	1/1:4,14:18:45.01:412,45,0	1/1:0,24:24:72.04:658,72,0	1/1:4,19:23:61.80:545,62,0	1/1:0,4:4:12.01:110,12,0
chr10	56808914	.	ACCAC	A	1373.06	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=2.647;DP=589;FS=7.705;HRun=0;HaplotypeScore=153.4801;InbreedingCoeff=0.0753;MQ=55.72;MQ0=14;MQRankSum=1.298;QD=5.60;ReadPosRankSum=-3.422;VQSLOD=1.3232;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:90.17:0,90,2004	1/1:1,12:13:27.56:416,28,0	0/0:51,0:15:29.91:0,30,359	0/0:49,0:13:16.48:0,16,224	0/0:29,0:29:87.28:0,87,2191	0/0:15,0:16:42.12:0,42,982	0/0:9,0:9:24.04:0,24,398	1/1:11,20:27:56:512,56,0	0/1:11,0:11:75.31:75,0,81	0/1:34,0:32:63.64:64,0,347	0/1:22,0:22:13.40:13,0,431	0/0:15,0:15:42.14:0,42,1070	0/0:19,0:19:57.20:0,57,1378	0/0:8,0:8:21.07:0,21,539	0/0:12,0:12:1.08:0,1,237	0/0:17,0:17:51.13:0,51,1122	0/0:23,0:23:66.12:0,66,1347	0/0:19,0:19:54.61:0,55,1191	0/1:21,0:18:99:126,0,150	0/1:27,0:27:86.38:86,0,260	0/1:10,0:10:27.12:27,0,115	0/0:6,0:6:18.06:0,18,485	0/0:12,0:12:30.09:0,30,667	0/0:15,0:15:40.62:0,41,738	0/1:19,0:19:57.91:58,0,297	0/1:33,0:33:99:114,0,427	0/1:24,0:24:45.18:45,0,358	0/0:11,0:11:27.08:0,27,313
chr10	56808935	.	C	CCAAA	8777.44	PASS	AB=1.000;AC=24;AF=0.429;AN=56;BaseQRankSum=7.272;DP=583;FS=0.777;HRun=0;HaplotypeScore=130.0780;InbreedingCoeff=0.8213;MQ=56.38;MQ0=15;MQRankSum=-5.872;QD=33.50;ReadPosRankSum=1.881;VQSLOD=4.8657;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:84.19:0,84,1226	0/1:15,0:15:16.33:16,0,216	0/0:34,0:13:7.83:0,8,133	0/0:41,0:14:6.60:0,7,190	0/0:35,0:35:99:0,99,1428	0/0:18,0:18:42.09:0,42,599	0/0:13,0:13:29.89:0,30,283	0/1:31,0:27:13.48:13,0,189	1/1:2,7:11:8.67:199,9,0	1/1:26,11:35:75.11:1222,75,0	1/1:2,21:23:60.11:1172,60,0	0/0:17,0:17:48.13:0,48,729	0/0:21,0:21:48.12:0,48,729	0/0:9,0:9:24.06:0,24,374	1/1:3,10:13:30:609,30,0	0/0:15,0:15:39.12:0,39,626	0/0:24,0:24:51.95:0,52,797	0/0:24,0:24:57.10:0,57,803	1/1:13,6:17:41.35:616,41,0	1/1:17,9:26:57.05:943,57,0	1/1:1,8:9:11.99:241,12,0	0/0:7,0:7:21.06:0,21,330	0/0:12,0:12:27.07:0,27,396	0/0:17,0:17:38.50:0,39,453	1/1:3,16:19:36.11:833,36,0	1/1:21,9:30:68.30:1199,68,0	1/1:13,7:20:51.09:1049,51,0	1/1:0,9:9:27.09:665,27,0
chr10	56809638	.	CAA	C	2649.49	PASS	AB=0.624;AC=27;AF=0.482;AN=56;BaseQRankSum=-5.968;DP=487;FS=1.471;HRun=14;HaplotypeScore=71.6422;InbreedingCoeff=0.2777;MQ=57.49;MQ0=16;MQRankSum=-1.401;QD=8.72;ReadPosRankSum=-1.266;VQSLOD=1.2661;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:26:59.03:0,59,685	1/1:2,0:3:2.72:12,3,0	0/0:23,0:6:7.91:0,8,62	0/0:26,0:9:12.08:0,12,108	0/0:16,0:20:32.53:0,33,379	0/0:7,0:15:13.73:0,14,85	0/0:6,0:17:21.71:0,22,87	0/1:5,1:23:9.03:9,0,86	1/1:3,7:9:15:139,15,0	1/1:5,19:23:53.76:479,54,0	0/1:9,11:20:12.01:220,0,12	0/1:7,0:12:9.27:9,0,37	0/0:16,0:17:5.02:0,5,143	0/0:6,0:8:17.50:0,17,169	1/1:4,7:10:17.98:167,18,0	0/1:5,0:12:0.21:0,0,34	0/1:13,2:32:20.68:21,0,141	0/1:8,2:17:4.79:5,0,47	1/1:6,13:22:0.53:332,1,0	1/1:5,18:22:8.97:392,9,0	0/1:4,4:8:30.39:71,0,30	0/0:6,0:10:15.49:0,15,85	0/1:7,1:21:19.13:19,0,50	0/0:5,0:13:2.70:0,3,38	1/1:3,5:8:15:139,15,0	1/1:6,18:25:50.58:503,51,0	0/1:6,11:17:57.53:214,0,58	1/1:1,4:5:5.87:102,6,0
chr10	56813463	.	C	CT	9209.53	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-17.871;DP=783;FS=0.292;HRun=2;HaplotypeScore=71.5097;InbreedingCoeff=1.0000;MQ=83.43;MQ0=0;MQRankSum=-8.408;QD=38.21;ReadPosRankSum=4.213;VQSLOD=5.3121;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,114,1383	0/0:14,0:14:39.12:0,39,483	0/0:26,0:26:67.44:0,67,772	0/0:20,0:20:60.19:0,60,736	0/0:33,0:33:96.28:0,96,1165	1/1:2,25:27:66.21:933,66,0	1/1:1,20:21:57.15:796,57,0	0/0:37,0:37:99:0,108,1317	0/0:29,0:29:81.25:0,81,1004	0/0:36,0:36:99:0,99,1227	0/0:30,0:30:84.23:0,84,1014	1/1:1,22:23:63.21:907,63,0	0/0:21,0:21:63.20:0,63,781	0/0:25,0:25:75.24:0,75,929	0/0:42,0:42:99:0,123,1511	1/1:0,38:38:99:1512,105,0	1/1:0,30:30:84.28:1210,84,0	1/1:0,16:16:42.14:601,42,0	0/0:21,0:21:60.19:0,60,742	0/0:31,0:31:90.28:0,90,1116	0/0:32,0:32:96.27:0,96,1163	1/1:3,24:27:69.19:962,69,0	1/1:0,28:28:75.25:1077,75,0	1/1:0,31:31:84.28:1210,84,0	0/0:19,0:19:57.18:0,57,706	0/0:28,0:28:84.26:0,84,1042	0/0:36,0:36:99:0,105,1287	0/0:23,0:23:69.22:0,69,852
chr10	56818435	.	A	AG	10817.30	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-18.608;DP=720;FS=0.603;HRun=2;HaplotypeScore=64.0113;InbreedingCoeff=0.9997;MQ=81.72;MQ0=0;MQRankSum=-1.550;QD=39.34;ReadPosRankSum=2.025;VQSLOD=5.3210;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,129,1581	1/1:2,12:14:36.12:518,36,0	0/0:18,0:18:54.16:0,54,660	0/0:20,0:20:54.17:0,54,664	0/0:31,0:31:93.28:0,93,1139	1/1:5,22:27:69.23:989,69,0	1/1:2,21:23:57.19:821,57,0	1/1:2,20:22:60.19:845,60,0	0/0:26,0:26:78.22:0,78,944	0/0:21,0:21:63.11:0,63,760	0/0:8,0:8:24.08:0,24,298	1/1:1,38:39:99:1597,111,0	0/0:33,0:33:99:0,99,1225	0/0:36,0:36:99:0,108,1338	0/0:35,0:35:99:0,102,1264	1/1:2,32:34:93.31:1339,93,0	1/1:2,30:32:90.30:1296,90,0	1/1:0,23:23:63.21:907,63,0	0/0:21,0:21:60.17:0,60,720	0/0:24,0:24:69.20:0,69,843	0/0:34,0:34:99:0,102,1234	1/1:0,23:23:69.23:993,69,0	1/1:2,18:20:54.18:777,54,0	1/1:1,17:18:51.17:734,51,0	0/0:27,0:27:78.19:0,78,936	0/0:27,0:27:81.25:0,81,1004	0/0:22,0:22:63.17:0,63,756	0/0:17,0:17:48.15:0,48,595
chr10	56819938	.	C	CT	3765.45	PASS	AB=0.985;AC=21;AF=0.375;AN=56;BaseQRankSum=1.327;DP=607;FS=0.000;HRun=10;HaplotypeScore=69.1666;InbreedingCoeff=0.7804;MQ=65.64;MQ0=2;MQRankSum=-10.204;QD=15.82;ReadPosRankSum=-0.295;VQSLOD=3.8229;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:34:69.62:0,70,625	0/0:10,0:10:29.97:0,30,246	0/1:25,0:11:10.15:10,0,106	0/1:24,0:18:16.37:16,0,81	0/0:31,0:31:81.21:0,81,652	1/1:5,18:23:42.11:447,42,0	1/1:2,15:17:44.31:438,44,0	0/0:26,0:26:65.92:0,66,542	0/0:17,0:17:44.93:0,45,369	0/1:20,1:21:13.29:13,0,298	0/0:27,0:27:70.95:0,71,572	1/1:3,11:15:38.89:373,39,0	0/0:21,0:21:47.91:0,48,390	0/0:19,0:19:53.93:0,54,441	0/0:23,0:23:59.89:0,60,489	1/1:6,10:16:24.05:250,24,0	1/1:4,23:27:38.83:598,39,0	1/1:2,14:16:17.53:391,18,0	0/0:25,0:25:46.74:0,47,412	0/0:30,0:30:68.82:0,69,566	0/0:15,0:15:25.36:0,25,219	1/1:4,11:15:30.56:335,31,0	1/1:4,10:15:38.88:383,39,0	1/1:4,18:23:50.61:512,51,0	0/0:13,0:13:29.95:0,30,246	0/0:34,0:34:83.87:0,84,689	0/0:21,0:21:47.92:0,48,394	0/0:21,0:21:44.88:0,45,369
chr10	56821767	.	A	AT	3190.02	PASS	AB=0.792;AC=18;AF=0.321;AN=56;BaseQRankSum=-10.283;DP=461;FS=4.819;HRun=10;HaplotypeScore=46.9430;InbreedingCoeff=0.8061;MQ=64.49;MQ0=0;MQRankSum=1.252;QD=20.45;ReadPosRankSum=4.564;VQSLOD=4.3405;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:79.90:0,80,646	0/0:8,0:8:20.97:0,21,172	0/1:12,0:10:12.04:12,0,84	0/0:9,0:6:8.70:0,9,54	0/0:17,0:17:47.24:0,47,390	1/1:2,14:18:44.78:444,45,0	0/1:6,15:21:16.79:452,0,17	0/0:37,0:38:90.63:0,91,712	0/0:9,0:10:9.33:0,9,158	0/0:15,0:15:44.95:0,45,369	0/0:6,0:6:17.98:0,18,148	1/1:1,9:11:26.94:271,27,0	0/0:13,0:14:29.94:0,30,246	0/0:7,0:7:20.96:0,21,169	0/0:16,0:16:44.94:0,45,369	1/1:1,11:12:30.08:320,30,0	1/1:3,20:23:54.14:576,54,0	1/1:7,13:20:26.98:421,27,0	0/0:27,1:28:27.90:0,28,432	0/0:12,0:12:26.95:0,27,219	0/0:19,0:19:38.94:0,39,320	1/1:0,8:8:21.05:222,21,0	1/1:3,10:13:8.44:294,8,0	1/1:4,14:18:36.09:384,36,0	0/0:15,0:15:38.95:0,39,320	0/0:24,0:25:58.95:0,59,473	0/0:24,0:24:56.88:0,57,461	0/0:6,0:6:11.97:0,12,98
chr10	56822588	.	G	GGGA	458.89	PASS	AC=16;AF=0.296;AN=54;BaseQRankSum=2.005;DP=249;FS=6.713;HRun=0;HaplotypeScore=30.5101;InbreedingCoeff=0.7588;MQ=67.79;MQ0=13;MQRankSum=-0.981;QD=5.88;ReadPosRankSum=3.538;VQSLOD=0.2324;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:11:26.62:0,27,206	0/0:4,0:4:5.98:0,6,47	0/0:28,0:12:25.41:0,25,253	0/0:11,0:3:3.47:0,3,28	0/0:7,0:6:8.99:0,9,74	1/1:4,0:5:11.89:105,12,0	1/1:3,0:17:5.37:34,5,0	0/0:16,0:14:26.98:0,27,230	0/0:4,0:4:9:0,9,78	0/0:11,0:10:26.90:0,27,218	0/0:5,0:4:12:0,12,104	1/1:1,9:11:5.98:113,6,0	0/0:6,0:6:18:0,18,156	0/0:5,0:5:13.25:0,13,106	0/0:5,0:4:11.97:0,12,99	1/1:7,0:8:23.82:205,24,0	1/1:2,13:17:5.96:53,6,0	1/1:1,0:11:3.01:46,3,0	0/0:10,0:10:18.82:0,19,144	0/0:9,0:8:14.94:0,15,118	0/0:8,0:8:14.97:0,15,123	1/1:4,0:3:5.91:40,6,0	1/1:1,0:1:3.01:35,3,0	./.	0/0:6,0:6:14.99:0,15,126	0/0:7,0:7:21.01:0,21,185	0/0:7,0:7:20.95:0,21,171	0/0:4,0:4:11.97:0,12,96
chr10	56822690	.	A	AT	1035.54	PASS	AB=0.768;AC=17;AF=0.315;AN=54;BaseQRankSum=3.956;DP=261;FS=0.000;HRun=12;HaplotypeScore=33.6870;InbreedingCoeff=0.6830;MQ=62.95;MQ0=5;MQRankSum=0.295;QD=11.51;ReadPosRankSum=2.158;VQSLOD=2.2573;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:13:32.69:0,33,232	./.	0/1:5,0:4:0:0,0,0	0/0:8,0:5:11.92:0,12,86	0/0:14,0:14:20.80:0,21,153	1/1:5,8:13:15.02:146,15,0	1/1:2,1:3:3.48:30,3,0	0/0:22,0:25:50.20:0,50,330	0/0:5,1:6:5.69:0,6,43	0/0:7,0:6:11.75:0,12,85	0/0:11,0:11:20.86:0,21,153	1/1:3,11:12:24.04:233,24,0	0/0:7,0:8:19.93:0,20,137	0/0:5,0:5:14.86:0,15,104	0/0:5,0:5:5.95:0,6,44	1/1:1,4:5:9.01:87,9,0	0/1:6,14:20:8.91:233,0,9	1/1:1,14:16:24.04:233,24,0	0/0:15,0:15:26.80:0,27,194	0/0:3,0:3:8.95:0,9,66	0/0:8,0:8:17.86:0,18,131	0/1:3,2:5:12.89:49,0,13	1/1:1,3:4:6.01:58,6,0	1/1:0,5:5:15.02:146,15,0	0/0:7,0:7:17.86:0,18,130	0/0:13,0:13:12.18:0,12,179	0/0:11,0:11:29.74:0,30,211	0/0:7,0:7:11.91:0,12,88
chr10	56823234	.	CT	C	1680.41	PASS	AB=0.907;AC=21;AF=0.375;AN=56;BaseQRankSum=7.360;DP=538;FS=1.351;HRun=13;HaplotypeScore=59.5995;InbreedingCoeff=0.6898;MQ=68.37;MQ0=4;MQRankSum=1.456;QD=7.89;ReadPosRankSum=2.498;VQSLOD=2.5460;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,1:18:19.86:0,20,328	0/0:10,1:11:5.13:0,5,212	0/1:13,1:10:9.42:9,0,64	0/0:20,0:10:9.06:0,9,96	0/0:27,2:29:25.23:0,25,554	1/1:2,14:16:38.76:284,39,0	1/1:1,10:12:25.89:181,26,0	0/1:41,4:42:6.78:7,0,552	0/0:14,1:15:17.14:0,17,323	0/0:24,0:26:59.89:0,60,555	0/0:24,1:26:21.37:0,21,463	1/1:6,11:17:33.87:230,34,0	0/0:15,1:16:17.10:0,17,314	0/0:10,1:12:2.07:0,2,167	0/0:22,0:21:45.05:0,45,431	1/1:7,13:20:9.56:233,10,0	1/1:3,16:18:12.61:255,13,0	1/1:2,13:15:35.77:263,36,0	0/0:23,2:26:13.08:0,13,427	0/0:30,0:31:65.75:0,66,604	0/0:14,0:14:32.95:0,33,301	1/1:4,7:11:19.92:137,20,0	1/1:3,9:12:23.82:175,24,0	1/1:1,4:5:8.95:66,9,0	0/0:20,1:23:29.03:0,29,406	0/1:20,4:25:42.71:43,0,261	0/0:22,2:25:4.34:0,4,354	0/0:9,0:9:27.03:0,27,258
chr10	56823912	.	TA	T	674.79	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.585;DP=374;FS=1.576;HRun=9;HaplotypeScore=35.9606;InbreedingCoeff=0.8151;MQ=63.53;MQ0=0;MQRankSum=-3.342;QD=17.30;ReadPosRankSum=-2.891;VQSLOD=2.4553;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:52.86:0,53,651	1/1:0,7:7:21.01:192,21,0	0/0:6,0:5:7.88:0,8,67	0/0:4,0:3:3.01:0,3,35	0/0:19,0:19:48.14:0,48,554	0/0:16,0:16:33.10:0,33,381	0/0:5,0:5:15.04:0,15,172	1/1:9,23:30:66.01:603,66,0	0/0:7,0:7:21.05:0,21,233	0/0:15,0:15:42.07:0,42,469	0/0:12,0:12:33.10:0,33,381	0/0:7,0:7:21.06:0,21,243	0/0:5,0:5:15.04:0,15,173	0/0:7,0:7:18.05:0,18,208	0/0:15,0:15:42.12:0,42,485	0/0:15,0:15:42.12:0,42,485	0/0:41,0:40:96.27:0,96,1096	0/0:20,0:19:48.14:0,48,554	0/0:12,0:12:30.05:0,30,331	0/0:12,0:12:30.09:0,30,346	0/0:8,0:7:18.05:0,18,208	0/0:3,0:3:6.02:0,6,69	0/0:7,0:7:18.05:0,18,208	0/0:11,0:11:33.10:0,33,381	0/0:13,0:13:30.09:0,30,346	0/0:12,0:12:27.06:0,27,293	0/0:24,0:24:63.17:0,63,718	0/0:16,0:16:48.14:0,48,554
chr10	56824017	.	C	CA	1353.22	PASS	AB=0.782;AC=19;AF=0.339;AN=56;BaseQRankSum=-7.557;DP=462;FS=1.118;HRun=14;HaplotypeScore=59.1074;InbreedingCoeff=0.2599;MQ=63.21;MQ0=20;MQRankSum=-0.514;QD=5.83;ReadPosRankSum=-1.493;VQSLOD=1.8822;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:30:54.21:0,54,337	0/0:1,0:4:6.11:0,6,18	0/1:16,0:6:1.10:1,0,14	0/0:24,0:10:2.33:0,2,53	0/1:17,1:17:6.77:7,0,82	0/0:6,0:18:22.37:0,22,65	0/0:3,0:10:12.20:0,12,35	0/0:6,0:23:36.69:0,37,104	1/1:4,6:8:15:132,15,0	0/1:11,7:18:17.54:111,0,18	1/1:4,8:11:15:132,15,0	0/0:3,0:6:11.10:0,11,43	0/0:5,0:5:5.81:0,6,38	0/0:7,0:8:7.83:0,8,44	0/1:6,10:16:43.21:152,0,43	0/0:5,0:16:30.35:0,30,109	0/0:9,0:26:38.46:0,38,132	0/0:6,0:19:26.27:0,26,97	0/1:11,9:21:7.12:174,0,7	0/1:9,8:16:7.31:60,0,7	1/1:4,5:9:9.47:80,9,0	0/1:6,1:9:8.50:17,0,9	0/0:7,0:14:8.92:0,9,37	0/0:9,0:22:28.52:0,29,115	0/1:9,5:14:20.70:76,0,21	0/1:18,8:26:14.55:131,0,15	1/1:7,17:21:4.85:159,5,0	1/1:3,13:15:19.77:297,20,0
chr10	56825486	.	AC	A	1028.62	PASS	AB=0.533;AC=7;AF=0.135;AN=52;BaseQRankSum=0.703;DP=197;FS=0.000;HRun=2;HaplotypeScore=27.8169;InbreedingCoeff=0.6419;MQ=59.38;MQ0=0;MQRankSum=-1.810;QD=29.39;ReadPosRankSum=-0.284;VQSLOD=2.7273;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:7:12.04:0,12,179	./.	0/0:12,0:12:36.09:0,36,482	0/0:4,0:4:12.04:0,12,180	0/0:9,0:9:15.01:0,15,199	0/0:16,0:16:48.16:0,48,717	0/0:4,0:4:12.01:0,12,156	1/1:1,20:21:60.09:756,60,0	0/0:8,0:8:24.08:0,24,359	0/0:15,0:15:41.88:0,42,626	0/0:4,0:4:11.95:0,12,130	0/0:5,0:5:15.05:0,15,224	0/0:7,0:7:18.06:0,18,262	0/0:9,0:9:24.08:0,24,358	0/0:6,0:6:18.06:0,18,269	0/0:4,0:4:11.95:0,12,130	1/1:0,4:4:9.03:117,9,0	0/0:3,0:3:9.03:0,9,135	0/0:5,0:5:15.05:0,15,224	0/0:6,0:6:18.06:0,18,269	0/0:2,0:2:6:0,6,69	0/0:10,0:10:21.07:0,21,313	0/0:5,0:5:12:0,12,154	./.	0/0:8,0:8:18.06:0,18,269	0/1:1,7:8:20.76:248,0,21	0/0:13,0:13:33.07:0,33,461	1/1:0,2:2:3.01:39,3,0
chr10	56826451	.	AT	A	3645.76	PASS	AB=0.900;AC=19;AF=0.339;AN=56;BaseQRankSum=9.652;DP=550;FS=24.479;HRun=11;HaplotypeScore=57.9983;InbreedingCoeff=0.8815;MQ=74.68;MQ0=0;MQRankSum=1.556;QD=17.36;ReadPosRankSum=2.823;VQSLOD=2.6968;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:81.09:0,81,833	0/1:8,1:9:0.58:1,0,200	0/0:17,1:16:3.18:0,3,195	0/0:9,0:9:12:0,12,112	0/0:19,0:20:50.90:0,51,512	1/1:2,14:17:39.23:323,39,0	1/1:5,11:16:3.94:239,4,0	0/0:23,0:23:54.13:0,54,569	0/0:16,0:16:39.09:0,39,410	0/0:28,0:29:71.84:0,72,728	0/0:19,0:20:53.97:0,54,558	1/1:2,29:31:74.82:607,75,0	0/0:11,0:11:27.05:0,27,275	0/0:9,0:9:24.04:0,24,247	0/0:29,0:29:69.09:0,69,711	1/1:4,23:28:38.97:516,39,0	1/1:6,16:22:50.90:416,51,0	1/1:3,19:22:53.93:443,54,0	0/0:21,0:21:44.95:0,45,462	0/0:10,1:11:5.41:0,5,248	0/0:8,0:9:20.09:0,20,241	1/1:4,17:22:40.97:326,41,0	1/1:2,21:24:63.78:504,64,0	1/1:5,14:19:32.95:271,33,0	0/0:18,0:18:48.06:0,48,492	0/0:23,1:24:41.51:0,42,641	0/0:22,2:24:13.87:0,14,558	0/0:14,0:14:36.09:0,36,384
chr10	56830472	.	C	CA	1879.60	PASS	AB=0.797;AC=22;AF=0.393;AN=56;BaseQRankSum=-4.087;DP=603;FS=2.512;HRun=15;HaplotypeScore=106.4082;InbreedingCoeff=0.3673;MQ=68.53;MQ0=4;MQRankSum=-0.266;QD=5.42;ReadPosRankSum=-4.845;VQSLOD=1.3758;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:24,2:28:16.91:17,0,160	0/0:9,0:9:10.87:0,11,70	0/0:19,0:7:4.40:0,4,15	0/0:18,0:13:5.42:0,5,36	0/1:23,3:28:25.93:26,0,172	0/0:3,0:14:20.35:0,20,59	0/0:4,0:11:14.20:0,14,41	0/0:37,1:43:4.95:0,5,300	1/1:5,10:15:7.53:91,8,0	1/1:16,18:36:51.06:400,51,0	0/1:19,11:31:37.01:161,0,37	0/0:7,0:21:25.89:0,26,75	0/1:14,2:18:3.68:4,0,80	0/1:18,1:22:2.02:2,0,182	1/1:7,17:25:22.27:200,22,0	0/0:4,0:23:34.20:0,34,99	0/0:5,0:24:36.20:0,36,105	0/0:4,0:22:32.55:0,33,94	1/1:10,9:19:11.85:189,12,0	1/1:14,8:25:28.62:274,29,0	0/1:6,10:17:27.23:114,0,27	0/0:5,0:21:32.54:0,33,94	0/0:5,0:14:14.16:0,14,41	0/0:2,0:15:24.41:0,24,70	0/1:17,9:29:36.41:142,0,36	1/1:8,9:19:11.64:187,12,0	0/1:10,14:26:10.63:172,0,11	1/1:3,5:9:11.83:90,12,0
chr10	56831179	.	A	AC	1396.93	PASS	AB=0.798;AC=33;AF=0.611;AN=54;BaseQRankSum=2.843;DP=380;FS=6.492;HRun=10;HaplotypeScore=68.7919;InbreedingCoeff=0.4497;MQ=63.37;MQ0=22;MQRankSum=-2.920;QD=6.00;ReadPosRankSum=-0.740;VQSLOD=1.0923;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:24:53.64:0,54,408	0/0:3,0:3:3:0,3,25	0/0:23,0:11:8.41:0,8,70	0/0:17,0:12:4.25:0,4,37	0/0:24,0:22:53.31:0,53,393	0/1:6,0:7:12.95:36,0,13	1/1:12,0:12:12.07:66,12,0	0/0:24,0:23:47.33:0,47,337	1/1:8,9:17:14.91:132,15,0	1/1:9,1:9:12.82:79,13,0	1/1:4,2:6:11.02:88,11,0	1/1:8,0:17:31.65:169,32,0	0/0:11,0:11:22.84:0,23,143	0/0:14,0:14:17.37:0,17,185	0/1:13,8:20:7.65:203,0,8	1/1:15,0:16:25.93:144,26,0	1/1:13,0:11:14.59:89,15,0	1/1:8,0:8:14.20:70,14,0	0/1:11,2:12:5.98:96,0,6	0/1:13,2:13:31.36:53,0,31	1/1:6,4:8:3.01:31,3,0	1/1:4,0:3:5.52:25,6,0	1/1:7,0:9:2.37:18,2,0	./.	1/1:9,5:14:6:64,6,0	1/1:7,2:10:13.59:137,14,0	0/1:7,9:14:49.73:50,0,66	1/1:2,4:4:3.01:32,3,0
chr10	56831189	.	C	CCCCA	2322.29	PASS	AB=0.950;AC=18;AF=0.321;AN=56;BaseQRankSum=1.105;DP=435;FS=12.772;HRun=0;HaplotypeScore=85.2544;InbreedingCoeff=0.7187;MQ=76.66;MQ0=22;MQRankSum=-3.662;QD=20.73;ReadPosRankSum=-2.032;VQSLOD=2.1094;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:30:69.03:0,69,957	0/0:5,0:5:14.90:0,15,135	0/0:40,0:20:19.70:0,20,224	0/0:28,0:21:4.01:0,4,136	0/0:24,0:23:65.94:0,66,905	0/1:8,0:9:28.38:244,0,28	1/1:1,10:15:12.48:203,12,0	0/0:27,0:29:55.91:0,56,805	0/0:15,0:14:19.40:0,19,104	0/0:18,0:17:18.35:0,18,215	0/1:12,0:12:19.58:20,0,84	1/1:15,2:17:38.98:609,39,0	0/0:11,0:11:30.03:0,30,394	0/0:16,0:16:42.04:0,42,533	0/0:19,0:18:41.86:0,42,320	1/1:8,8:15:36.05:613,36,0	1/1:7,4:8:15.04:238,15,0	1/1:3,4:9:12.51:253,13,0	0/0:19,0:18:6.49:0,6,167	0/0:12,0:10:14.64:0,15,138	0/0:11,0:9:8.75:0,9,55	1/1:5,1:6:18.01:221,18,0	1/1:7,0:8:12.32:93,12,0	1/1:5,0:3:2.99:24,3,0	0/0:10,0:10:14.61:0,15,99	0/0:8,0:9:19.89:0,20,111	0/0:17,0:15:22.36:0,22,254	0/0:8,0:7:5.79:0,6,35
chr10	56831460	.	A	AT	5064.08	PASS	AB=0.789;AC=23;AF=0.411;AN=56;BaseQRankSum=-8.476;DP=614;FS=0.340;HRun=10;HaplotypeScore=69.3521;InbreedingCoeff=0.7871;MQ=69.65;MQ0=0;MQRankSum=0.500;QD=19.63;ReadPosRankSum=2.667;VQSLOD=5.7627;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:38:97.88:0,98,794	0/0:12,0:12:26.96:0,27,222	0/0:13,0:14:37.91:0,38,299	0/0:13,0:12:21.84:0,22,172	0/0:19,1:19:18.97:0,19,359	0/0:32,0:33:75.44:0,75,640	0/0:21,0:21:56.88:0,57,461	0/0:28,0:28:59.89:0,60,493	1/1:3,20:23:38.53:615,39,0	1/1:6,15:22:44.90:447,45,0	1/1:3,18:22:51.13:543,51,0	0/0:36,0:36:97.18:0,97,810	0/0:26,0:26:62.91:0,63,517	0/0:27,0:27:68.90:0,69,567	1/1:5,32:37:87.22:928,87,0	0/0:33,0:33:83.89:0,84,690	0/0:27,0:27:74.89:0,75,612	0/0:25,0:24:59.90:0,60,493	1/1:4,14:18:42.07:430,42,0	1/1:3,10:13:33.06:343,33,0	1/1:1,10:11:30.08:320,30,0	0/0:3,0:3:8.99:0,9,74	0/1:8,1:9:11.02:11,0,127	0/1:28,3:31:21.07:21,0,464	0/1:4,16:20:4.17:370,0,4	1/1:6,15:21:23.46:447,23,0	1/1:7,19:25:47.95:493,48,0	1/1:2,3:5:9.02:96,9,0
chr10	56831677	.	CTT	C	1979.74	PASS	AB=0.678;AC=23;AF=0.411;AN=56;BaseQRankSum=-0.152;DP=548;FS=9.653;HRun=16;HaplotypeScore=76.8277;InbreedingCoeff=0.3045;MQ=52.35;MQ0=18;MQRankSum=1.462;QD=6.37;ReadPosRankSum=5.076;VQSLOD=-0.5225;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,1:26:18.65:0,19,374	0/0:4,0:4:6.02:0,6,78	0/0:21,0:6:0:0,0,0	0/0:21,0:4:0.47:0,0,1	0/1:20,2:23:12.88:13,0,280	0/1:9,7:19:3.42:103,0,3	0/1:6,7:16:8.22:147,0,8	0/0:36,0:37:44.13:0,44,419	0/1:6,1:13:12.67:13,0,80	0/0:11,0:20:24.90:0,25,146	0/0:12,0:23:27.82:0,28,126	1/1:11,16:30:46.39:347,46,0	0/0:16,0:17:37.25:0,37,407	0/0:27,1:26:56.46:0,56,620	0/1:8,1:21:16.09:16,0,52	1/1:9,19:29:44.41:416,44,0	1/1:7,9:15:26.66:225,27,0	1/1:10,7:19:15.44:238,15,0	0/0:9,1:17:7.36:0,7,153	0/0:9,0:18:15.08:0,15,123	0/1:9,2:12:24.62:36,0,25	1/1:5,5:7:5.94:49,6,0	1/1:3,12:16:29.66:236,30,0	1/1:3,13:17:32.34:260,32,0	0/1:6,3:15:39.25:39,0,58	0/1:15,1:23:19.56:20,0,90	0/1:11,1:23:1.86:2,0,90	0/0:0,0:1:2.37:0,2,8
chr10	56831692	.	TTC	T	34.90	PASS	AB=0.986;AC=9;AF=0.167;AN=54;BaseQRankSum=7.184;DP=525;FS=22.913;HRun=0;HaplotypeScore=78.0751;InbreedingCoeff=0.0501;MQ=47.13;MQ0=22;MQRankSum=-2.306;QD=0.24;ReadPosRankSum=6.381;VQSLOD=-0.1031;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:29:51.37:0,51,586	0/0:5,0:5:11.96:0,12,94	0/0:15,0:2:0:0,0,0	./.	0/0:22,0:21:44.44:0,44,471	0/1:14,1:14:13.95:14,0,60	0/1:16,0:14:2.98:3,0,62	0/0:26,0:26:67.43:0,67,638	0/0:18,0:18:32.97:0,33,232	0/0:22,0:21:47.12:0,47,348	0/0:19,0:19:35.27:0,35,233	0/1:25,1:25:38.43:38,0,75	0/0:21,0:21:56.95:0,57,631	0/0:27,0:25:56.93:0,57,701	0/0:21,0:21:48.76:0,49,341	0/1:29,0:29:14.56:15,0,138	1/1:11,0:10:7.01:22,7,0	0/0:24,0:22:10.07:0,10,167	0/0:22,0:19:30.48:0,30,297	0/0:22,0:22:29.41:0,29,255	0/0:11,0:9:0.75:0,1,108	0/1:12,0:8:9.29:9,0,69	0/1:18,0:18:44.45:44,0,65	0/1:16,0:16:19.74:20,0,38	0/0:19,0:17:29.25:0,29,197	0/0:21,2:23:16.36:0,16,331	0/0:19,0:19:22.64:0,23,188	0/0:3,0:2:5.92:0,6,38
chr10	56832526	.	AG	A	6237.74	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=6.257;DP=384;FS=7.005;HRun=1;HaplotypeScore=42.6058;InbreedingCoeff=0.9901;MQ=93.45;MQ0=0;MQRankSum=-1.489;QD=39.23;ReadPosRankSum=1.930;VQSLOD=5.0381;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:42.14:0,42,670	0/0:3,0:3:9.03:0,9,144	0/0:20,0:20:60.20:0,60,961	0/0:17,0:17:45.15:0,45,676	0/0:12,0:12:36.12:0,36,574	0/0:10,0:10:30.09:0,30,454	0/0:12,0:12:33.10:0,33,503	0/0:25,0:25:72.25:0,72,1142	1/1:0,12:12:36.12:502,36,0	1/1:0,21:21:63.20:866,63,0	1/1:0,10:10:30.10:420,30,0	0/0:22,0:22:66.21:0,66,1017	0/0:9,0:9:27.09:0,27,430	0/0:13,0:13:36.12:0,36,574	1/1:0,18:18:51.17:712,51,0	0/0:16,0:16:48.15:0,48,743	0/0:10,0:10:27.08:0,27,408	0/0:8,0:8:24.03:0,24,354	1/1:0,16:16:45.15:629,45,0	1/1:2,15:17:45.11:608,45,0	1/1:0,16:16:45.15:629,45,0	0/0:10,0:10:30.10:0,30,478	0/0:8,0:8:24.08:0,24,383	0/0:15,0:15:45.15:0,45,718	1/1:0,12:12:33.11:461,33,0	1/1:0,15:15:45.14:614,45,0	1/1:0,9:9:24.08:335,24,0	1/1:0,13:13:33.11:461,33,0
chr10	56832725	.	T	TTTC	1579.52	PASS	AB=0.500;AC=47;AF=0.940;AN=50;BaseQRankSum=-2.467;DP=140;FS=0.000;HRun=0;HaplotypeScore=228.3540;InbreedingCoeff=0.1410;MQ=28.62;MQ0=0;MQRankSum=-0.576;QD=11.36;ReadPosRankSum=2.741;VQSLOD=3.1132;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,7:7:1.34:21,1,0	1/1:0,1:1:2.90:16,3,0	./.	./.	1/1:0,13:13:27.07:122,27,0	1/1:0,5:5:14.47:80,14,0	1/1:0,3:3:2.88:16,3,0	1/1:0,1:1:2.96:19,3,0	1/1:0,7:7:18.62:102,19,0	0/1:0,7:6:5.30:43,0,5	1/1:0,5:5:14.17:72,14,0	1/1:0,8:8:23.17:131,23,0	1/1:0,5:5:14.20:71,14,0	1/1:0,6:6:17.15:89,17,0	1/1:0,14:14:12.47:153,12,0	1/1:0,9:9:25.82:137,26,0	0/0:0,1:1:2.60:0,3,10	1/1:0,2:2:5.91:39,6,0	1/1:0,1:1:2.96:19,3,0	1/1:0,7:7:10.62:47,11,0	./.	1/1:0,5:5:14.21:73,14,0	1/1:0,9:9:23.17:115,23,0	1/1:0,4:4:6.54:22,7,0	1/1:0,5:5:2.49:49,2,0	1/1:0,6:5:14.71:92,15,0	1/1:0,8:8:22.84:122,23,0	1/1:0,1:1:2.94:18,3,0
chr10	56833211	.	C	CT	1670.96	PASS	AB=0.872;AC=45;AF=0.833;AN=54;BaseQRankSum=-0.599;DP=284;FS=7.068;HRun=9;HaplotypeScore=111.4991;InbreedingCoeff=0.3930;MQ=34.06;MQ0=1;MQRankSum=-3.187;QD=6.40;ReadPosRankSum=-2.053;VQSLOD=1.0427;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:28:15.52:16,0,93	1/1:4,0:3:2.22:7,2,0	0/0:2,0:2:2.90:0,3,16	./.	0/1:19,0:19:35.35:35,0,91	1/1:10,0:10:13.49:61,13,0	1/1:16,0:13:18.04:61,18,0	1/1:4,3:6:8.98:86,9,0	1/1:5,1:6:8.34:59,8,0	1/1:10,6:16:25.14:248,25,0	0/1:3,5:8:0.01:147,0,0	1/1:11,0:11:21.28:99,21,0	0/0:11,0:11:6.66:0,7,64	0/0:9,0:8:13.66:0,14,61	1/1:7,1:8:8.82:68,9,0	1/1:13,1:13:26.68:137,27,0	1/1:10,0:10:17.23:90,17,0	1/1:10,0:10:15.63:66,16,0	1/1:4,2:4:6.32:48,6,0	1/1:4,0:4:11.36:56,11,0	1/1:7,0:7:5.80:32,6,0	1/1:12,0:12:19.99:80,20,0	1/1:9,0:9:15.08:62,15,0	1/1:17,0:17:28.20:124,28,0	1/1:6,1:7:3.89:34,4,0	1/1:14,0:14:17.60:89,18,0	1/1:15,0:12:14.37:90,14,0	1/1:2,0:1:2.84:14,3,0
chr10	56834952	.	GT	G	619.25	PASS	AB=1.000;AC=27;AF=0.482;AN=56;BaseQRankSum=10.929;DP=623;FS=175.935;HRun=2;HaplotypeScore=353.6425;InbreedingCoeff=-0.0998;MQ=50.76;MQ0=0;MQRankSum=-11.423;QD=1.18;ReadPosRankSum=12.364;VQSLOD=0.1221;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:24:21.98:22,0,73	0/0:8,0:8:5.41:0,5,58	0/0:8,0:8:12.97:0,13,125	0/0:6,0:6:7.72:0,8,78	0/1:15,0:15:16.47:25,0,16	1/1:21,1:21:1.78:54,2,0	0/1:44,0:44:9.16:9,0,179	0/0:16,1:17:7.88:0,8,58	0/1:25,0:25:2.53:31,0,3	0/1:21,0:21:29.79:30,0,83	1/1:12,0:12:2.42:23,2,0	0/1:64,0:64:82.34:116,0,82	0/1:40,0:40:34.35:40,0,34	0/1:44,0:44:15.39:82,0,15	0/1:36,0:36:1.33:64,0,1	0/1:38,0:38:20.45:20,0,137	0/1:18,0:17:14.35:14,0,37	0/0:16,0:16:11.23:0,11,86	0/0:14,0:14:7.78:0,8,91	1/1:6,0:6:2.86:9,3,0	0/0:27,0:27:10.01:0,10,115	0/1:17,0:17:4.55:5,0,87	0/1:12,0:12:2.60:3,0,101	1/1:19,1:20:26.55:101,27,0	1/1:9,1:10:7.22:31,7,0	0/1:24,0:24:22.20:22,0,43	1/1:28,0:28:27.06:73,27,0	0/1:7,0:7:7.96:8,0,33
chr10	56834985	.	TCTTCGG	T	1958.55	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=9.313;DP=511;FS=5.076;HRun=0;HaplotypeScore=377.9009;InbreedingCoeff=0.6519;MQ=34.17;MQ0=0;MQRankSum=-0.465;QD=51.54;ReadPosRankSum=4.675;VQSLOD=2.8628;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:75.26:0,75,2491	0/0:3,0:3:9.03:0,9,239	0/0:1,0:1:3.01:0,3,78	0/0:1,0:1:3.01:0,3,41	0/0:9,0:9:21.05:0,21,271	0/0:23,0:22:66.22:0,66,2205	0/0:30,0:30:87.30:0,87,2887	0/0:35,0:35:99:0,105,3606	0/0:25,0:25:75.26:0,75,2573	0/0:23,0:23:66.23:0,66,2169	0/0:8,0:8:15.05:0,15,316	1/1:2,36:38:99:2053,114,0	0/0:28,0:28:81.28:0,81,2844	0/0:36,0:36:99:0,105,3452	0/0:32,0:32:90.31:0,90,2939	0/0:26,0:26:75.26:0,75,2615	0/0:16,0:16:45.15:0,45,1461	0/0:11,0:11:33.11:0,33,1152	0/0:15,0:15:45.15:0,45,1608	0/0:3,0:3:9.03:0,9,208	0/0:23,0:23:45.01:0,45,1032	0/0:10,0:10:27.09:0,27,619	0/0:5,0:5:15.05:0,15,306	0/0:24,0:24:54.05:0,54,1631	0/0:7,0:7:21.07:0,21,588	0/0:21,0:21:63.22:0,63,2123	0/0:25,0:25:75.21:0,75,2386	0/0:6,0:6:18.06:0,18,674
chr10	56834992	.	ACGG	A	1035.34	PASS	AC=2;AF=0.037;AN=54;BaseQRankSum=9.864;DP=493;FS=4.183;HRun=0;HaplotypeScore=337.8873;InbreedingCoeff=0.5314;MQ=34.57;MQ0=0;MQRankSum=-0.495;QD=27.25;ReadPosRankSum=4.158;VQSLOD=2.7109;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:69.66:0,70,1502	0/0:3,0:3:6.36:0,6,55	0/0:1,0:1:3.01:0,3,71	./.	0/0:8,0:8:2.97:0,3,20	0/0:21,0:20:60.20:0,60,1371	0/0:33,0:33:84.16:0,84,1706	0/0:36,0:36:99:0,102,2211	0/0:23,0:23:66.18:0,66,1494	0/0:22,0:22:53.93:0,54,1149	0/0:7,0:7:5.98:0,6,83	1/1:1,37:38:99:1129,108,0	0/0:28,0:28:78.05:0,78,1555	0/0:35,0:35:96.07:0,96,1971	0/0:32,0:32:84.20:0,84,1800	0/0:23,0:23:69.03:0,69,1379	0/0:15,0:15:33.11:0,33,775	0/0:10,0:10:30.09:0,30,629	0/0:18,0:18:48.16:0,48,1125	0/0:4,0:4:6.02:0,6,141	0/0:22,0:22:23.73:0,24,466	0/0:8,0:8:12.04:0,12,219	0/0:3,0:3:6.02:0,6,107	0/0:22,0:22:39.13:0,39,884	0/0:6,0:6:15.05:0,15,289	0/0:19,0:19:54.06:0,54,1124	0/0:23,0:23:59.86:0,60,1264	0/0:6,0:6:18.06:0,18,424
chr10	56837669	.	C	CG	4650.96	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-10.591;DP=418;FS=0.000;HRun=5;HaplotypeScore=41.3842;InbreedingCoeff=0.9359;MQ=70.08;MQ0=0;MQRankSum=0.199;QD=29.07;ReadPosRankSum=2.620;VQSLOD=4.6365;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:69.17:0,69,740	0/0:9,0:9:24.06:0,24,256	0/0:9,0:9:10.65:0,11,188	0/0:6,0:6:11.08:0,11,139	0/0:4,0:4:9.02:0,9,96	1/1:2,13:15:36.12:473,36,0	1/1:3,18:21:45.15:592,45,0	0/0:7,0:7:21.05:0,21,225	0/0:11,0:11:24.06:0,24,257	0/0:17,0:17:48.12:0,48,515	0/0:2,0:2:3.01:0,3,32	1/1:6,24:30:57.06:748,57,0	0/0:15,0:15:42.10:0,42,450	0/0:13,0:13:36.09:0,36,386	0/0:13,0:13:36.09:0,36,386	1/1:1,16:17:42.14:552,42,0	1/1:1,22:23:48.16:632,48,0	1/1:2,21:23:57.18:747,57,0	0/0:13,0:13:30.07:0,30,320	0/0:7,0:7:15.04:0,15,161	0/0:58,0:58:99:0,153,1623	1/1:3,5:8:15.05:197,15,0	1/1:0,7:7:21.07:276,21,0	1/1:2,14:16:33.11:434,33,0	0/0:14,0:14:33.08:0,33,354	0/0:17,0:17:39.08:0,39,412	0/0:11,0:11:24.04:0,24,248	0/0:3,0:3:9.02:0,9,97
chr10	56839477	.	CT	C	6008.23	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=10.323;DP=555;FS=0.720;HRun=2;HaplotypeScore=61.9107;InbreedingCoeff=0.9934;MQ=80.14;MQ0=2;MQRankSum=-1.952;QD=32.83;ReadPosRankSum=4.508;VQSLOD=4.6125;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,126,1623	0/0:4,0:4:12.04:0,12,171	0/0:37,0:34:41.31:0,41,727	0/0:33,1:19:51.06:0,51,623	0/0:20,0:20:60.16:0,60,828	1/1:0,17:17:48.16:622,48,0	1/1:0,12:12:24.07:311,24,0	0/0:29,0:30:81.20:0,81,1116	0/0:19,0:19:57.16:0,57,789	0/0:15,0:15:45.15:0,45,661	0/0:13,0:13:39.11:0,39,525	1/1:0,27:27:72.23:932,72,0	0/0:10,0:10:30.10:0,30,436	0/0:22,0:22:62.85:0,63,893	0/0:25,0:25:75.23:0,75,1057	1/1:1,36:37:93.30:1202,93,0	1/1:1,25:26:69.22:894,69,0	1/1:1,22:23:46.22:795,46,0	0/0:18,0:18:50.08:0,50,660	0/0:10,0:10:30.10:0,30,442	0/0:13,0:13:39.12:0,39,561	1/1:0,10:10:21.01:245,21,0	1/1:0,15:15:39.12:503,39,0	1/1:0,16:16:39.13:505,39,0	0/0:16,0:16:48.16:0,48,705	0/0:15,0:15:45.14:0,45,635	0/0:19,0:19:57.16:0,57,795	0/0:7,0:7:21.07:0,21,302
chr10	56841068	.	AG	A	8645.71	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=13.553;DP=665;FS=1.711;HRun=2;HaplotypeScore=64.7286;InbreedingCoeff=0.9986;MQ=84.30;MQ0=0;MQRankSum=-2.319;QD=35.43;ReadPosRankSum=3.242;VQSLOD=5.4719;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:75.23:0,75,1078	0/0:8,0:8:21.07:0,21,313	0/0:20,0:20:49.80:0,50,740	0/0:20,0:20:50.31:0,50,701	0/0:20,0:20:60.20:0,60,888	1/1:0,31:31:78.25:1012,78,0	1/1:0,25:25:75.24:973,75,0	0/0:28,0:28:78.24:0,78,1131	0/0:34,0:34:99:0,102,1529	0/0:27,0:27:78.25:0,78,1150	0/0:8,0:8:21.06:0,21,294	1/1:0,38:38:99:1402,108,0	0/0:20,0:20:57.16:0,57,826	0/0:28,0:28:84.28:0,84,1259	0/0:30,0:30:90.29:0,90,1323	1/1:0,54:54:99:2026,157,0	1/1:0,27:27:75.24:974,75,0	1/1:1,10:11:30.10:389,30,0	0/0:15,0:15:42.14:0,42,618	0/0:17,0:17:42.14:0,42,627	0/0:26,0:26:75.24:0,75,1098	1/1:0,17:17:42.14:545,42,0	1/1:1,15:16:39.13:506,39,0	1/1:1,24:25:63.20:818,63,0	0/0:16,0:16:45.15:0,45,674	0/0:32,0:32:96.23:0,96,1367	0/0:25,0:25:75.25:0,75,1123	0/0:19,0:19:57.19:0,57,854
chr10	56841361	.	CTGG	C	5581.66	PASS	AC=20;AF=0.370;AN=54;BaseQRankSum=3.174;DP=609;FS=3.210;HRun=0;HaplotypeScore=104.5615;InbreedingCoeff=0.9607;MQ=62.38;MQ0=1;MQRankSum=4.995;QD=23.65;ReadPosRankSum=2.328;VQSLOD=4.9760;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:51.17:0,51,974	0/0:5,0:5:9.03:0,9,150	0/0:15,0:10:15.49:0,15,231	0/0:16,0:16:8.51:0,9,217	0/0:7,0:7:9.03:0,9,169	0/0:11,0:17:24.05:0,24,290	0/0:21,0:34:32.93:0,33,375	0/0:14,0:14:15.04:0,15,270	1/1:9,18:27:41.83:590,42,0	1/1:13,12:25:42.14:592,42,0	./.	0/0:21,0:39:69.14:0,69,850	0/0:28,0:28:60.21:0,60,1204	0/0:33,0:33:78.27:0,78,1535	1/1:5,25:30:63.21:893,63,0	0/0:15,0:28:45.02:0,45,553	0/0:14,0:19:14.85:0,15,131	0/0:22,0:27:44.85:0,45,554	1/1:11,7:18:21.07:298,21,0	1/1:5,13:18:35.21:497,35,0	1/1:22,38:60:43.45:1226,43,0	0/0:15,0:16:15.02:0,15,184	0/0:7,0:11:20.47:0,20,225	0/0:18,0:28:27.04:0,27,359	1/1:5,11:16:27.09:383,27,0	1/1:7,8:15:27.09:383,27,0	1/1:8,8:16:23.82:336,24,0	1/1:2,9:11:27.09:383,27,0
chr10	56842403	.	AG	A	1042.55	PASS	AB=0.981;AC=20;AF=0.417;AN=48;BaseQRankSum=0.389;DP=201;FS=2.682;HRun=10;HaplotypeScore=37.9114;InbreedingCoeff=0.6484;MQ=93.03;MQ0=0;MQRankSum=0.081;QD=9.07;ReadPosRankSum=4.192;VQSLOD=1.1199;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:12,1:13:1.01:0,1,231	./.	0/0:17,0:14:26.32:0,26,196	0/1:12,0:9:9.59:10,0,105	./.	1/1:2,5:7:12:104,12,0	1/1:2,8:10:23.99:207,24,0	0/0:5,0:7:6.32:0,6,48	0/0:1,0:1:3.01:0,3,33	0/0:3,0:3:6:0,6,57	./.	1/1:5,7:12:14.97:130,15,0	0/0:4,0:6:9.48:0,9,93	0/0:8,0:8:19.53:0,20,172	0/0:2,0:2:3.01:0,3,33	1/1:0,7:8:17.03:136,17,0	1/1:4,8:12:23.98:208,24,0	1/1:5,10:15:23.99:208,24,0	0/0:5,0:5:15.01:0,15,152	0/0:2,0:2:6.02:0,6,66	0/1:23,1:25:0.95:1,0,422	1/1:1,2:3:5.99:52,6,0	1/1:0,2:2:6:52,6,0	1/1:2,6:9:13.98:110,14,0	0/0:6,0:6:5.95:0,6,51	0/0:9,0:9:15.03:0,15,166	0/0:6,0:6:11.98:0,12,105	./.
chr10	56846199	.	T	TC	10965.44	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=18.242;DP=731;FS=3.295;HRun=1;HaplotypeScore=87.9564;InbreedingCoeff=1.0000;MQ=82.14;MQ0=0;MQRankSum=-1.165;QD=43.17;ReadPosRankSum=3.070;VQSLOD=4.8281;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:93.29:0,93,1268	0/0:13,0:13:39.13:0,39,545	0/0:17,0:17:51.12:0,51,684	0/0:25,0:25:68.60:0,69,780	0/0:18,0:18:54.16:0,54,733	1/1:0,28:28:72.25:1150,72,0	1/1:1,26:27:75.26:1198,75,0	0/0:38,0:38:99:0,114,1592	0/0:17,0:17:51.17:0,51,710	0/0:35,0:35:99:0,105,1450	0/0:21,0:21:63.21:0,63,881	1/1:0,33:33:81.28:1294,81,0	0/0:19,0:19:54.18:0,54,751	0/0:20,0:20:60.18:0,60,820	0/0:34,0:34:99:0,99,1346	1/1:1,42:43:99:1868,117,0	1/1:1,27:28:81.28:1294,81,0	1/1:0,29:29:84.29:1340,84,0	0/0:29,0:29:84.28:0,84,1174	0/0:22,0:22:63.20:0,63,864	0/0:33,0:33:99:0,99,1345	1/1:0,25:25:66.22:1054,66,0	1/1:0,22:22:60.20:953,60,0	1/1:0,19:19:51.17:815,51,0	0/0:21,0:21:63.21:0,63,879	0/0:32,0:32:93.30:0,93,1271	0/0:39,0:39:99:0,114,1594	0/0:13,0:13:39.13:0,39,545
chr10	56847956	.	A	AT	4698.08	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=-11.895;DP=621;FS=0.363;HRun=7;HaplotypeScore=62.7052;InbreedingCoeff=0.8914;MQ=66.77;MQ0=1;MQRankSum=0.385;QD=25.81;ReadPosRankSum=1.529;VQSLOD=5.3992;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,105,1014	0/0:10,0:10:27.04:0,27,261	0/0:21,0:15:33.02:0,33,306	0/0:11,0:11:4.86:0,5,86	0/0:23,0:23:66.10:0,66,637	1/1:5,16:21:48.15:580,48,0	1/1:5,15:20:42.60:508,43,0	0/0:33,0:32:81.12:0,81,782	0/0:20,0:20:54.08:0,54,521	0/0:31,0:31:78.12:0,78,753	0/0:27,0:27:81.12:0,81,776	1/1:4,24:28:75.23:903,75,0	0/0:17,0:17:32.65:0,33,439	0/0:20,0:20:54.07:0,54,514	0/0:32,0:32:90.14:0,90,868	1/1:2,31:33:87.27:1051,87,0	1/1:15,0:15:11.88:92,12,0	0/1:14,0:14:12.67:13,0,23	0/0:25,0:24:72.12:0,72,695	0/0:34,0:34:93.12:0,93,887	0/0:11,0:11:27.04:0,27,261	1/1:1,25:26:69.21:828,69,0	1/1:3,16:19:45.13:543,45,0	1/1:1,5:6:15.05:181,15,0	0/0:27,0:26:75.12:0,75,724	0/0:25,0:25:72.11:0,72,695	0/0:27,0:27:72.11:0,72,695	0/0:9,0:9:24.04:0,24,232
chr10	56847960	.	T	TTTTTGTTTGTTTG	1345.51	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=-5.037;DP=629;FS=9.957;HRun=0;HaplotypeScore=226.9943;InbreedingCoeff=0.1271;MQ=63.97;MQ0=2;MQRankSum=-0.871;QD=7.39;ReadPosRankSum=-2.744;VQSLOD=0.3254;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,106,2664	0/0:9,0:9:27.09:0,27,825	0/0:23,0:14:33.03:0,33,371	0/0:9,0:9:4.86:0,5,86	0/0:23,0:23:66.20:0,66,2062	0/1:19,0:19:93.18:93,0,792	0/1:20,0:20:99:195,0,523	0/0:33,0:32:87.21:0,87,1873	0/0:21,0:21:57.15:0,57,1675	0/0:29,0:29:81.25:0,81,2603	0/0:31,0:31:90.26:0,90,2529	0/1:26,0:26:99:103,0,1229	0/0:17,0:17:51.10:0,51,1371	0/0:21,0:21:57.16:0,57,1525	0/0:31,0:31:90.26:0,90,2643	0/1:33,0:33:99:149,0,1259	1/1:2,9:18:12.04:635,12,0	1/1:3,8:18:3.01:194,3,0	0/0:29,0:27:61.76:0,62,1549	0/0:35,0:35:99:0,102,2875	0/0:10,0:10:30.07:0,30,721	0/1:25,0:25:41.88:42,0,1078	0/1:17,0:17:63.19:63,0,688	0/1:6,0:6:20.99:21,0,257	0/0:26,0:25:75.23:0,75,2476	0/0:25,0:25:75.16:0,75,2490	0/0:27,0:27:75.22:0,75,2301	0/0:9,0:9:24.08:0,24,776
chr10	56848188	.	T	TATGC	15610.17	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-16.309;DP=857;FS=0.623;HRun=0;HaplotypeScore=126.2030;InbreedingCoeff=0.9974;MQ=73.14;MQ0=2;MQRankSum=-4.643;QD=53.28;ReadPosRankSum=1.308;VQSLOD=6.0578;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,117,2115	0/0:16,0:16:42.14:0,42,755	0/0:23,0:23:50.63:0,51,788	0/0:17,0:17:36.08:0,36,597	0/0:27,0:27:72.23:0,72,1273	1/1:5,24:31:66.23:1727,66,0	1/1:4,21:30:51.18:1334,51,0	0/0:31,0:31:63.20:0,63,1083	0/0:30,0:30:90.28:0,90,1577	0/0:26,0:26:75.25:0,75,1332	0/0:22,0:22:63.22:0,63,1139	1/1:2,35:39:96.33:2511,96,0	0/0:33,0:33:93.30:0,93,1636	0/0:29,0:29:84.27:0,84,1482	0/0:47,0:47:99:0,132,2361	1/1:2,48:49:99:2980,114,0	1/1:3,28:36:75.26:1962,75,0	1/1:3,12:17:33.11:863,33,0	0/0:28,0:28:69.20:0,69,1192	0/0:46,0:46:99:0,132,2361	0/0:48,0:47:99:0,129,2298	1/1:4,18:24:42.14:1097,42,0	1/1:2,21:25:57.08:1487,57,0	1/1:6,27:39:63.22:1648,63,0	0/0:27,0:27:81.28:0,81,1472	0/0:25,0:25:66.21:0,66,1144	0/0:37,0:37:99:0,99,1751	0/0:8,0:8:15.05:0,15,272
chr10	56848930	.	AAGTGATGCGATCT	A	23165.28	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=18.694;DP=663;FS=2.179;HRun=0;HaplotypeScore=263.2357;InbreedingCoeff=0.9974;MQ=89.36;MQ0=0;MQRankSum=-17.904;QD=93.03;ReadPosRankSum=5.921;VQSLOD=4.5051;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:66.21:0,66,4078	0/0:8,0:8:24.08:0,24,1457	0/0:33,0:33:90.25:0,90,4760	0/0:25,0:25:65.88:0,66,3224	0/0:28,0:28:81.28:0,81,5174	0/0:23,0:23:66.21:0,66,3734	0/0:26,0:26:72.25:0,72,4503	0/0:41,0:41:99:0,120,6972	1/1:2,20:22:48.16:1919,48,0	1/1:1,21:22:63.22:2541,63,0	1/1:2,24:26:69.15:2499,69,0	0/0:30,0:30:90.31:0,90,5631	0/0:24,0:24:69.24:0,69,4272	0/0:17,0:17:48.16:0,48,3007	1/1:2,42:44:99:4104,102,0	0/0:37,0:37:99:0,111,7028	0/0:16,0:16:48.14:0,48,2939	0/0:20,0:20:60.18:0,60,3475	1/1:0,13:13:39.02:1177,39,0	1/1:1,27:28:72.06:2494,72,0	1/1:1,11:12:18.06:726,18,0	0/0:26,0:26:78.27:0,78,5007	0/0:24,0:24:72.25:0,72,4398	0/0:13,0:13:39.12:0,39,2160	1/1:1,18:19:39.13:1573,39,0	1/1:1,31:32:93.17:3350,93,0	1/1:1,23:24:51.18:2056,51,0	1/1:0,7:7:18.06:726,18,0
chr10	56849496	.	T	TGG	180.01	PASS	AB=0.975;AC=9;AF=0.161;AN=56;BaseQRankSum=1.547;DP=554;FS=29.958;HRun=0;HaplotypeScore=83.5955;InbreedingCoeff=0.1401;MQ=41.34;MQ0=88;MQRankSum=-1.554;QD=1.54;ReadPosRankSum=0.069;VQSLOD=0.1292;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:36:92.39:0,92,1061	0/0:5,0:5:15.05:0,15,186	1/1:24,0:3:2.73:12,3,0	0/0:18,0:4:2.04:0,2,6	0/0:25,0:24:54.77:0,55,606	0/1:17,0:16:32.47:32,0,67	0/1:15,0:11:32.77:33,0,40	0/0:39,0:32:78.19:0,78,958	0/0:16,0:16:30.74:0,31,313	0/0:23,0:19:54.17:0,54,689	0/0:23,0:22:44.63:0,45,564	0/0:16,0:15:17.21:0,17,123	0/0:16,0:14:36:0,36,416	0/0:11,0:5:9.03:0,9,109	0/0:13,0:12:30.02:0,30,359	0/0:13,0:13:4.74:0,5,82	0/0:26,0:21:12.11:0,12,178	0/1:17,1:10:58.76:59,0,81	0/0:24,0:16:48.14:0,48,603	0/0:18,0:15:35.45:0,35,405	0/0:15,0:10:24.03:0,24,239	0/1:13,0:13:58.50:58,0,117	0/1:12,1:13:84.03:95,0,84	1/1:15,2:14:0.45:21,0,0	0/0:13,0:12:36.11:0,36,440	0/0:28,0:25:75.20:0,75,918	0/0:24,0:21:52.40:0,52,633	0/0:33,0:24:50.97:0,51,567
chr10	56849519	.	TGGTTCTTTTTTTC	T	1956.57	PASS	AB=1.000;AC=14;AF=0.280;AN=50;BaseQRankSum=2.865;DP=414;FS=17.993;HRun=0;HaplotypeScore=118.2198;InbreedingCoeff=0.7808;MQ=38.63;MQ0=72;MQRankSum=-0.257;QD=19.18;ReadPosRankSum=-0.637;VQSLOD=1.2457;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:56.58:0,57,1717	0/0:4,0:4:11.90:0,12,159	./.	./.	0/0:17,0:18:32.69:0,33,857	1/1:12,1:12:21.05:455,21,0	0/1:14,0:10:6.03:170,0,6	0/0:33,0:25:74.69:0,75,1630	0/0:15,0:16:41.86:0,42,653	0/0:16,0:14:42.14:0,42,1229	0/0:18,0:17:27.09:0,27,982	1/1:11,2:12:30.07:562,30,0	0/0:14,0:13:30.02:0,30,704	0/0:11,0:8:18.03:0,18,545	0/0:14,0:14:33.07:0,33,943	1/1:11,1:12:12.02:235,12,0	1/1:15,0:10:12.03:249,12,0	0/1:12,0:5:33.52:174,0,34	0/0:23,0:17:48.14:0,48,1405	0/0:12,0:9:17.99:0,18,576	0/0:12,0:7:8.99:0,9,213	1/1:5,4:9:11.86:87,12,0	./.	1/1:14,0:12:14.91:204,15,0	0/0:14,0:13:32.79:0,33,984	0/0:16,0:15:42.14:0,42,1426	0/0:17,0:15:36.46:0,36,929	0/0:22,0:20:42.10:0,42,1160
chr10	56850432	.	GCTCTCTCTCTCT	G	2899.36	PASS	AB=0.860;AC=19;AF=0.352;AN=54;BaseQRankSum=8.208;DP=567;FS=3.273;HRun=0;HaplotypeScore=175.5869;InbreedingCoeff=0.4073;MQ=55.74;MQ0=13;MQRankSum=-5.961;QD=11.28;ReadPosRankSum=1.651;VQSLOD=2.8493;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:30:38.91:0,39,1720	0/1:4,0:10:35.91:47,0,36	0/0:32,0:17:6.02:0,6,201	0/0:44,0:23:18.05:0,18,513	0/0:15,0:15:14.94:0,15,765	1/1:8,13:24:19.88:612,20,0	1/1:8,8:15:2.48:38,2,0	0/1:35,0:35:2.91:3,0,691	0/1:21,0:21:50.57:51,0,258	0/0:12,0:12:12.04:0,12,531	0/0:9,0:9:3.01:0,3,122	1/1:9,13:22:13.29:374,13,0	0/0:24,0:27:57.16:0,57,2445	0/0:24,0:24:30.10:0,30,1546	0/0:24,0:24:6.02:0,6,220	1/1:13,16:30:33.07:1021,33,0	1/1:12,10:21:16.30:526,16,0	0/1:8,3:11:99:200,0,106	0/0:14,0:12:18.06:0,18,617	0/0:7,0:7:3.01:0,3,173	0/0:32,0:31:18.05:0,18,451	0/0:6,1:6:0:0,0,0	1/1:12,4:17:8.83:77,9,0	1/1:14,6:20:0.16:0,0,0	./.	0/0:18,0:18:39.13:0,39,1493	0/1:24,0:23:99:121,0,851	0/0:7,0:7:2.98:0,3,22
chr10	56850454	.	TCTCTCTCTCTCTCTCAGGGATACAGCTCGCTGG	T	1273.91	PASS	AB=1.000;AC=15;AF=0.300;AN=50;BaseQRankSum=-4.700;DP=633;FS=2.692;HRun=0;HaplotypeScore=368.5061;InbreedingCoeff=0.7745;MQ=58.68;MQ0=10;MQRankSum=-5.883;QD=9.88;ReadPosRankSum=1.581;VQSLOD=1.5571;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:44.13:0,44,3893	0/0:15,0:15:24.08:0,24,1034	0/0:43,0:21:53.03:0,53,1481	0/0:70,0:28:46.91:0,47,992	0/0:17,0:17:4.73:0,5,1678	0/0:38,0:38:69:0,69,3127	0/0:20,0:19:18.32:0,18,509	0/0:31,0:27:33.65:0,34,2026	1/1:17,0:14:9.03:509,9,0	1/1:7,0:6:9.04:31,9,0	./.	0/0:35,0:35:50.01:0,50,1931	0/0:29,0:29:51.17:0,51,3555	0/0:21,0:21:36.12:0,36,3357	1/1:15,0:15:0.13:1,0,0	0/0:35,0:35:70.73:0,71,2823	0/0:27,0:26:38.59:0,39,2332	0/0:9,0:9:4.10:0,4,667	1/1:10,0:9:14.27:170,14,0	0/1:10,0:7:0:0,0,0	1/1:30,0:28:0.47:1,0,0	0/0:15,0:14:9.03:0,9,561	0/0:27,0:27:25.20:0,25,901	0/0:13,0:13:0.47:0,0,1	./.	1/1:19,0:17:17.24:185,17,0	1/1:14,7:21:13.51:529,14,0	./.
chr10	56850456	.	TCTCTCTCTCTCTCAGGGATACAGCTCGCTGG	T	1274.29	PASS	AB=1.000;AC=14;AF=0.280;AN=50;BaseQRankSum=-4.831;DP=625;FS=2.709;HRun=0;HaplotypeScore=343.2997;InbreedingCoeff=0.7872;MQ=59.41;MQ0=11;MQRankSum=-5.341;QD=10.53;ReadPosRankSum=1.568;VQSLOD=1.6092;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:47.13:0,47,3890	0/0:15,0:15:24.08:0,24,997	0/0:46,0:23:57.92:0,58,1636	0/0:74,0:28:48.06:0,48,1117	0/0:18,0:18:7.74:0,8,1852	0/0:37,0:37:71.81:0,72,3044	0/0:19,0:19:19.16:0,19,444	0/0:31,0:28:39.46:0,39,2127	1/1:16,0:13:9.03:510,9,0	1/1:6,0:5:9.61:33,10,0	./.	0/0:35,0:35:49.29:0,49,1858	0/0:27,0:27:51.17:0,51,3481	0/0:20,0:20:36.12:0,36,3215	1/1:14,0:14:0.46:1,0,0	0/0:37,0:37:76.75:0,77,3038	0/0:26,0:25:39.70:0,40,2190	0/0:9,0:9:3.46:0,3,659	1/1:9,0:8:14.74:179,15,0	0/1:9,0:6:0:0,0,0	0/1:27,0:25:0:1,0,0	0/0:15,0:14:12.04:0,12,610	0/0:25,0:25:24.97:0,25,905	0/0:13,0:13:0.47:0,0,1	./.	1/1:19,0:17:18.38:214,18,0	1/1:21,0:21:13.86:490,14,0	./.
chr10	56850468	.	TCAGGGATACAGCTCGCTGG	T	1140.26	PASS	AC=14;AF=0.292;AN=48;BaseQRankSum=-2.632;DP=560;FS=5.301;HRun=0;HaplotypeScore=246.4331;InbreedingCoeff=0.8187;MQ=66.79;MQ0=8;MQRankSum=-3.296;QD=14.43;ReadPosRankSum=-1.851;VQSLOD=2.0633;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:57.20:0,57,3435	0/0:14,0:14:27.09:0,27,1242	0/0:52,0:30:78.56:0,79,2236	0/0:73,0:33:39.37:0,39,1719	0/0:18,0:18:16.92:0,17,2141	0/0:36,0:36:77.54:0,78,3055	0/0:22,0:22:27.24:0,27,913	0/0:19,0:19:54.11:0,54,2969	1/1:8,7:12:9.03:470,9,0	1/1:4,1:4:7.79:31,8,0	./.	0/0:35,0:35:53.82:0,54,2063	0/0:19,0:19:54.19:0,54,3197	0/0:17,0:17:39.13:0,39,2766	1/1:9,4:13:0.47:1,0,0	0/0:37,0:37:83.62:0,84,3058	0/0:26,0:26:51.85:0,52,2317	0/0:9,0:9:4.78:0,5,937	1/1:2,1:3:8.20:183,8,0	./.	1/1:9,5:12:0.89:2,1,0	0/0:12,0:12:12.04:0,12,708	0/0:24,0:24:28.19:0,28,1035	0/0:15,0:15:6.16:0,6,203	./.	1/1:9,6:13:21.78:306,22,0	1/1:14,0:14:11.21:298,11,0	./.
chr10	56850515	.	T	TCACACACACACACA	1621.48	PASS	AB=0.994;AC=23;AF=0.426;AN=54;BaseQRankSum=-1.221;DP=530;FS=29.932;HRun=0;HaplotypeScore=195.5056;InbreedingCoeff=0.2523;MQ=48.18;MQ0=17;MQRankSum=-1.627;QD=5.59;ReadPosRankSum=-5.227;VQSLOD=-0.3730;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:46:81.40:0,81,2757	0/1:6,0:6:5.05:5,0,337	0/0:34,0:11:15.05:0,15,420	0/1:31,0:14:10.61:11,0,261	0/0:18,0:17:24.08:0,24,722	1/1:22,2:23:15.52:508,16,0	1/1:16,0:16:15.93:196,16,0	0/0:23,0:22:17.53:0,18,635	0/1:16,0:14:65.51:138,0,66	0/1:7,0:5:0:0,0,0	0/0:9,0:8:9.50:0,10,131	1/1:24,1:23:6.91:207,7,0	0/0:23,0:23:47.22:0,47,1785	0/0:28,0:28:57.20:0,57,2230	0/1:33,0:30:17.53:18,0,653	1/1:33,0:33:5.72:195,6,0	1/1:17,0:17:9.03:147,9,0	./.	0/1:15,0:14:99:137,0,147	0/0:8,0:6:12.92:0,13,193	0/1:17,0:15:59.74:90,0,60	1/1:4,0:6:0.47:1,0,0	0/0:15,3:19:0.04:0,0,0	1/1:17,0:16:3.01:75,3,0	0/0:14,0:12:15.05:0,15,295	0/1:19,0:15:39.51:40,0,298	0/0:16,0:16:20.17:0,20,272	0/1:5,0:4:24.23:24,0,73
chr10	56850786	.	CTGTGTGTGTGTGTGTGTGTG	C	1028.01	PASS	AC=16;AF=0.320;AN=50;BaseQRankSum=2.268;DP=581;FS=5.311;HRun=0;HaplotypeScore=253.9432;InbreedingCoeff=0.7234;MQ=55.87;MQ0=16;MQRankSum=-1.552;QD=5.78;ReadPosRankSum=1.274;VQSLOD=2.0570;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:25.60:0,26,2168	0/0:5,0:5:3.01:0,3,104	./.	./.	0/0:12,0:12:15.05:0,15,1169	1/1:17,10:27:3.01:92,3,0	1/1:26,0:25:11.07:153,11,0	0/0:35,0:34:24.16:0,24,589	0/0:25,0:25:35.26:0,35,2320	0/0:13,0:13:15.05:0,15,1051	0/0:12,0:10:2.19:0,2,200	1/1:35,0:35:11.38:133,11,0	0/0:20,0:18:26.04:0,26,2049	0/0:21,0:21:39.13:0,39,2600	0/0:24,0:23:39.59:0,40,2895	1/1:20,5:25:5.60:317,6,0	1/1:18,1:18:8.16:109,8,0	1/1:20,0:20:3:48,3,0	0/0:16,0:16:11.72:0,12,803	0/0:17,0:16:12.03:0,12,587	0/0:49,0:48:38.63:0,39,2992	./.	1/1:9,0:9:2.76:23,3,0	1/1:11,6:17:6.02:317,6,0	0/0:18,0:18:3.34:0,3,223	0/0:19,0:19:29.68:0,30,1652	0/0:12,0:12:19:0,19,1545	0/0:11,0:10:15.05:0,15,921
chr10	56850939	.	TTC	T	7514.60	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=13.698;DP=685;FS=3.719;HRun=0;HaplotypeScore=88.6454;InbreedingCoeff=0.9990;MQ=81.29;MQ0=2;MQRankSum=-1.766;QD=31.71;ReadPosRankSum=1.883;VQSLOD=6.8242;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,114,1974	0/0:9,0:9:27.09:0,27,466	0/0:25,0:24:42.71:0,43,876	0/0:17,0:16:36.10:0,36,571	0/0:11,0:11:24.08:0,24,416	0/0:22,0:22:60.20:0,60,1017	0/0:36,0:36:99:0,99,1652	0/0:41,0:41:99:0,99,1672	1/1:2,26:28:66.22:879,66,0	1/1:3,18:21:54.18:718,54,0	1/1:1,8:9:24.08:320,24,0	0/0:48,0:48:99:0,138,2366	0/0:21,0:21:60.21:0,60,1038	0/0:25,0:25:72.25:0,72,1238	1/1:1,16:17:45.11:580,45,0	0/0:28,0:28:75.24:0,75,1254	0/0:34,0:34:84.29:0,84,1441	0/0:17,0:17:42.14:0,42,711	1/1:5,11:15:30.10:400,30,0	1/1:0,11:11:27.09:360,27,0	1/1:7,46:53:99:1718,129,0	0/0:20,0:20:57.18:0,57,957	0/0:18,0:18:45.15:0,45,775	0/0:28,0:28:72.25:0,72,1240	1/1:0,21:21:57.19:759,57,0	1/1:4,19:23:54.16:703,54,0	1/1:1,20:21:45.15:599,45,0	1/1:5,12:17:36.12:479,36,0
chr10	56852043	.	TTCTC	T	11488.26	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=16.969;DP=728;FS=10.594;HRun=0;HaplotypeScore=122.6619;InbreedingCoeff=0.9985;MQ=80.66;MQ0=2;MQRankSum=-4.461;QD=42.71;ReadPosRankSum=4.548;VQSLOD=4.8649;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,135,3551	0/0:13,0:13:36.12:0,36,960	0/0:17,0:17:45.15:0,45,1138	0/0:23,0:23:57.19:0,57,1381	0/0:8,0:8:24.08:0,24,610	1/1:0,11:11:27.09:485,27,0	1/1:2,36:38:81.28:1511,81,0	0/0:21,0:21:48.16:0,48,1207	0/0:22,0:22:66.23:0,66,1707	0/0:30,0:30:87.28:0,87,2106	0/0:13,0:13:39.13:0,39,1006	1/1:4,34:37:81.24:1440,81,0	0/0:24,0:24:72.25:0,72,1909	0/0:45,1:46:73.44:0,73,3249	0/0:35,0:35:90.31:0,90,2268	1/1:2,38:40:99:1848,99,0	1/1:2,41:42:99:1901,102,0	1/1:0,35:35:81.28:1512,81,0	0/0:14,0:14:36.12:0,36,932	0/0:13,0:13:39.12:0,39,912	0/0:63,0:63:99:0,187,4764	1/1:1,14:15:42.14:727,42,0	1/1:1,11:12:24.55:448,25,0	1/1:1,36:37:90.04:1616,90,0	0/0:20,0:20:54.19:0,54,1440	0/0:16,0:16:45.14:0,45,1097	0/0:27,0:27:75.26:0,75,1925	0/0:7,0:7:21.07:0,21,560
chr10	56862039	.	TA	T	5525.88	PASS	AB=1.000;AC=27;AF=0.482;AN=56;BaseQRankSum=14.363;DP=537;FS=3.529;HRun=10;HaplotypeScore=112.5151;InbreedingCoeff=0.9168;MQ=74.86;MQ0=2;MQRankSum=-2.508;QD=19.53;ReadPosRankSum=0.573;VQSLOD=4.5358;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:77.53:0,78,822	1/1:2,10:12:23.98:208,24,0	0/0:21,0:16:3.24:0,3,64	0/1:11,0:7:5.82:6,0,16	0/0:25,1:26:43.12:0,43,677	0/0:19,0:18:54.04:0,54,556	0/0:9,0:9:18.02:0,18,186	1/1:16,25:41:93.38:738,93,0	1/1:4,13:17:41.67:348,42,0	1/1:6,11:17:34.37:306,34,0	1/1:3,16:19:50.95:435,51,0	0/0:15,0:15:36.01:0,36,379	0/0:17,0:17:42.11:0,42,456	0/0:12,0:12:24.02:0,24,238	1/1:4,19:23:65.06:533,65,0	0/0:21,0:21:51.08:0,51,538	0/0:27,0:27:69.21:0,69,730	0/0:23,0:23:52.40:0,52,604	1/1:8,15:24:56.12:458,56,0	1/1:4,21:25:59.98:519,60,0	1/1:0,7:7:15:130,15,0	0/0:7,0:7:20.94:0,21,193	0/0:13,0:13:33.55:0,34,355	0/0:15,0:15:42.02:0,42,425	1/1:2,25:27:71.98:621,72,0	1/1:5,16:21:52.96:431,53,0	1/1:3,23:28:59.75:507,60,0	1/1:0,11:11:32.99:286,33,0
chr10	56863985	.	A	AC	2412.08	PASS	AB=0.909;AC=23;AF=0.411;AN=56;BaseQRankSum=-7.409;DP=341;FS=2.184;HRun=7;HaplotypeScore=39.5189;InbreedingCoeff=0.8597;MQ=88.70;MQ0=0;MQRankSum=-0.443;QD=19.77;ReadPosRankSum=1.587;VQSLOD=2.9103;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:69.08:0,69,666	0/0:4,0:4:12.02:0,12,116	0/0:15,0:15:28.14:0,28,259	0/0:16,0:16:41.61:0,42,364	0/0:5,0:5:15.02:0,15,145	0/0:10,0:10:24.03:0,24,232	0/0:25,0:25:51.07:0,51,491	0/0:29,0:29:72.11:0,72,695	1/1:4,7:11:15.05:181,15,0	1/1:0,9:9:24.07:289,24,0	1/1:0,5:5:6.02:72,6,0	0/0:17,0:17:42.07:0,42,405	0/0:11,0:11:27.04:0,27,259	0/0:9,0:9:21.03:0,21,203	1/1:2,6:8:15.05:181,15,0	0/1:9,1:10:6.19:6,0,231	0/0:14,0:14:33.05:0,33,319	0/0:7,0:7:15.01:0,15,145	1/1:2,4:6:12.04:145,12,0	1/1:0,5:5:12.04:144,12,0	1/1:4,25:29:66.67:798,67,0	0/0:3,0:3:6:0,6,52	0/0:4,0:4:9.01:0,9,87	0/0:10,0:10:18.03:0,18,174	1/1:6,4:10:15.03:170,15,0	1/1:5,9:14:27.06:313,27,0	1/1:0,9:9:21.06:254,21,0	1/1:1,5:6:6.02:72,6,0
chr10	56868085	.	G	GAAA	2640.59	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-4.355;DP=469;FS=6.259;HRun=12;HaplotypeScore=97.3109;InbreedingCoeff=0.9189;MQ=54.21;MQ0=10;MQRankSum=-3.696;QD=19.85;ReadPosRankSum=-0.450;VQSLOD=2.3948;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:23:49.79:0,50,521	0/0:1,0:2:2.93:0,3,18	0/0:22,0:8:18.46:0,18,144	0/0:17,0:8:11.56:0,12,108	0/0:25,0:30:52.28:0,52,602	1/1:2,18:20:34.36:608,34,0	1/1:7,5:13:20.26:292,20,0	0/0:11,0:36:78.18:0,78,496	0/0:19,0:20:41.89:0,42,445	0/0:18,0:20:37.08:0,37,410	0/0:13,0:15:17.82:0,18,178	1/1:3,9:12:30.10:517,30,0	0/0:6,0:6:11.97:0,12,135	0/0:14,0:14:23.88:0,24,257	0/0:20,0:20:41.93:0,42,468	1/1:6,7:13:14.88:258,15,0	1/1:8,10:21:24.03:349,24,0	1/1:2,9:12:15.03:243,15,0	0/0:13,0:11:17.90:0,18,202	0/0:20,0:21:43.49:0,43,487	0/0:7,0:7:14.99:0,15,168	1/1:5,4:9:6.02:93,6,0	1/1:3,10:15:19.26:279,19,0	1/1:10,3:14:15.46:209,15,0	0/0:15,0:15:8.11:0,8,295	0/0:20,0:21:38.74:0,39,409	0/0:18,0:18:32.74:0,33,362	0/0:13,0:10:19.46:0,19,233
chr10	56868102	.	TA	T	4554.51	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=-0.056;DP=554;FS=0.000;HRun=10;HaplotypeScore=71.1431;InbreedingCoeff=0.9200;MQ=58.95;MQ0=6;MQRankSum=2.193;QD=20.06;ReadPosRankSum=2.647;VQSLOD=5.7448;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:83.78:0,84,855	0/0:3,0:3:8.99:0,9,87	0/0:32,0:11:9.94:0,10,149	0/0:21,0:11:24.68:0,25,209	0/0:38,0:38:87.24:0,87,961	0/0:20,0:20:42.04:0,42,445	0/0:15,0:15:33.09:0,33,363	0/0:42,1:43:63.87:0,64,880	1/1:2,18:20:47.99:417,48,0	1/1:3,21:24:62.99:547,63,0	1/1:3,15:19:41.01:344,41,0	0/0:17,0:17:39.02:0,39,404	0/0:14,0:14:33.09:0,33,365	0/0:15,0:16:41.95:0,42,446	1/1:2,21:23:62.99:547,63,0	0/0:10,0:10:21.93:0,22,226	0/0:24,0:24:46.89:0,47,486	0/0:13,0:12:21.03:0,21,220	1/1:4,18:21:53.97:465,54,0	1/1:4,16:20:44.97:390,45,0	1/1:0,12:12:26.99:234,27,0	0/0:12,0:11:21.04:0,21,223	0/0:20,0:20:39.45:0,39,436	0/1:9,0:9:7.59:8,0,148	1/1:1,15:16:44.99:391,45,0	1/1:3,20:23:56.98:495,57,0	1/1:6,20:26:50.84:437,51,0	1/1:4,9:12:32.95:280,33,0
chr10	56868623	.	A	AAG	590.29	PASS	AB=0.905;AC=11;AF=0.212;AN=52;BaseQRankSum=-0.803;DP=595;FS=10.856;HRun=0;HaplotypeScore=115.0259;InbreedingCoeff=0.3548;MQ=69.46;MQ0=8;MQRankSum=2.195;QD=3.14;ReadPosRankSum=0.919;VQSLOD=1.4601;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:13,19:32:6.02:90,6,0	0/0:6,0:6:9.01:0,9,91	./.	./.	0/1:21,8:30:29.76:233,0,30	0/1:23,3:25:10.75:60,0,11	0/0:21,0:21:2.83:0,3,19	0/0:34,0:34:21.01:0,21,207	0/0:19,0:19:27.07:0,27,296	0/0:26,0:26:48:0,48,493	0/0:18,0:17:15.04:0,15,166	0/1:20,1:21:6.03:38,0,6	0/0:18,0:21:3.50:0,4,210	0/0:20,0:20:27.54:0,28,292	0/0:19,0:19:38.93:0,39,405	0/0:18,0:18:5.67:0,6,59	0/0:20,0:19:11.15:0,11,67	0/1:18,0:18:0.38:0,0,59	0/0:17,0:17:18.04:0,18,189	0/0:21,0:21:5.56:0,6,236	0/0:18,0:16:20.97:0,21,214	1/1:17,0:17:8.85:80,9,0	1/1:20,1:21:13.52:111,14,0	0/1:20,2:23:7.87:122,0,8	0/0:17,0:17:18:0,18,193	0/0:28,0:28:49.35:0,49,523	0/0:27,0:27:39.11:0,39,431	0/0:4,0:3:6.02:0,6,66
chr10	56868659	.	GAC	G	1073.37	PASS	AB=0.988;AC=16;AF=0.308;AN=52;BaseQRankSum=-1.625;DP=609;FS=3.088;HRun=0;HaplotypeScore=136.1129;InbreedingCoeff=0.3254;MQ=44.49;MQ0=47;MQRankSum=4.787;QD=3.77;ReadPosRankSum=-5.762;VQSLOD=0.5829;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:33:20.93:0,21,187	0/1:5,0:5:6.36:6,0,120	./.	./.	0/1:35,0:33:9.84:10,0,291	1/1:36,0:31:7.71:86,8,0	0/1:23,1:18:8.48:47,0,8	0/0:33,0:32:88.25:0,88,612	0/0:20,0:20:26.92:0,27,378	0/0:21,0:21:34.53:0,35,749	0/0:21,0:17:17.81:0,18,282	1/1:25,1:26:41.59:347,42,0	0/0:21,0:21:24.74:0,25,459	0/0:19,1:18:39.05:0,39,550	0/0:26,0:24:29:0,29,470	0/1:21,0:17:28.97:75,0,29	0/1:30,2:27:30.82:171,0,31	0/1:15,0:14:58.09:58,0,82	0/0:21,0:15:42.27:0,42,411	0/1:24,0:22:3.94:4,0,328	0/0:24,0:17:21.07:0,21,367	1/1:14,1:14:17.92:139,18,0	1/1:28,1:24:25.61:200,26,0	0/1:23,0:20:4.26:100,0,4	0/0:14,0:12:17.87:0,18,291	0/0:30,0:29:68.27:0,68,981	0/0:24,0:23:49.41:0,49,710	0/0:10,0:6:5.97:0,6,106
chr10	56868717	.	GAC	G	1563.69	PASS	AB=0.976;AC=15;AF=0.268;AN=56;BaseQRankSum=12.403;DP=651;FS=12.094;HRun=0;HaplotypeScore=162.4599;InbreedingCoeff=0.4189;MQ=53.63;MQ0=33;MQRankSum=-9.449;QD=8.14;ReadPosRankSum=1.047;VQSLOD=2.5371;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:37:52.95:0,53,1124	1/1:1,0:1:2.04:6,2,0	0/0:15,0:10:10.38:0,10,271	0/1:31,1:13:16.31:16,0,119	0/0:23,0:21:57.20:0,57,1088	0/0:30,0:26:42.14:0,42,780	0/0:21,0:15:27.05:0,27,412	0/0:44,0:43:34.97:0,35,678	1/1:18,1:19:6.90:74,7,0	0/1:14,0:14:20.62:321,0,21	0/0:17,1:17:1.81:0,2,6	0/0:35,0:35:81.28:0,81,1560	0/0:25,0:25:57.17:0,57,1033	0/0:24,0:23:57.20:0,57,1099	0/1:25,0:24:0:0,0,0	0/0:33,0:29:60.17:0,60,1089	0/0:31,0:26:54.14:0,54,938	0/0:19,0:19:45.11:0,45,808	0/1:18,2:15:96.49:288,0,96	1/1:17,2:18:5.95:65,6,0	0/0:21,1:17:2.86:0,3,38	0/0:12,0:12:30.10:0,30,579	0/0:32,0:28:63.18:0,63,1123	0/0:26,0:24:51.15:0,51,949	0/0:11,0:9:0:0,0,0	0/1:21,0:21:44.61:295,0,45	1/1:24,1:24:28.87:425,29,0	1/1:16,0:13:1.17:227,1,0
chr10	56868721	.	GAC	G	2046.65	PASS	AB=0.781;AC=15;AF=0.268;AN=56;BaseQRankSum=11.104;DP=658;FS=2.740;HRun=0;HaplotypeScore=167.6296;InbreedingCoeff=0.4664;MQ=56.84;MQ0=31;MQRankSum=-10.089;QD=9.65;ReadPosRankSum=-0.386;VQSLOD=3.5875;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:36:59.95:0,60,1238	1/1:1,0:1:2.74:12,3,0	0/0:21,0:14:12.95:0,13,402	0/1:39,1:19:18.30:18,0,183	0/0:24,0:22:60.21:0,60,1139	0/0:30,0:27:48.15:0,48,874	0/0:19,0:14:27.09:0,27,519	0/1:42,0:41:13.83:14,0,268	1/1:2,15:17:8.82:89,9,0	0/1:4,10:14:10.67:383,0,11	0/0:5,13:17:3.84:0,4,12	0/0:35,0:35:87.28:0,87,1627	0/0:24,0:24:60.21:0,60,1153	0/0:23,0:22:57.20:0,57,1082	0/0:7,19:25:2.03:0,2,6	0/0:32,0:28:60.20:0,60,1156	0/0:32,0:27:54.17:0,54,1000	0/0:19,0:19:45.15:0,45,830	0/1:12,8:16:41.69:319,0,42	0/1:8,11:18:3.71:65,0,4	0/0:19,2:16:5.62:0,6,68	0/0:12,0:12:30.10:0,30,579	0/0:32,0:28:66.21:0,66,1238	0/0:28,0:26:57.20:0,57,1080	0/0:6,7:11:2.04:0,2,6	1/1:9,9:18:40.77:515,41,0	1/1:7,17:23:41.62:503,42,0	1/1:6,10:13:23.62:302,24,0
chr10	56868723	.	CAG	C	982.99	PASS	AB=0.974;AC=11;AF=0.196;AN=56;BaseQRankSum=11.779;DP=664;FS=10.054;HRun=0;HaplotypeScore=174.4651;InbreedingCoeff=0.2175;MQ=57.85;MQ0=29;MQRankSum=-10.177;QD=5.72;ReadPosRankSum=2.895;VQSLOD=2.6669;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:34:59.99:0,60,1149	1/1:0,1:1:3:26,3,0	0/0:22,0:15:8.71:0,9,539	0/0:42,2:23:9.44:0,9,305	0/0:25,0:23:63.20:0,63,1076	0/0:30,0:27:48.16:0,48,834	0/0:20,0:15:30.10:0,30,523	0/1:36,10:45:99:214,0,322	0/1:16,0:16:0.66:38,0,1	0/1:14,0:14:54.63:177,0,55	0/0:18,0:17:3.84:0,4,12	0/0:33,0:33:87.30:0,87,1526	0/0:24,0:24:60.21:0,60,1036	0/0:23,0:22:57.17:0,57,981	0/0:22,0:22:2.03:0,2,6	0/0:31,0:28:60.20:0,60,1064	0/0:33,0:28:57.19:0,57,964	0/0:20,0:20:49.68:0,50,807	0/1:19,0:15:99:116,0,103	0/1:18,0:17:26.48:26,0,34	0/0:20,0:16:5.88:0,6,84	0/0:12,0:12:30.10:0,30,532	0/0:33,0:29:69.22:0,69,1184	0/0:30,0:28:57.20:0,57,1003	0/0:15,0:13:4.07:0,4,12	0/1:18,0:18:40.80:172,0,41	0/1:24,0:23:3.62:207,0,4	1/1:16,0:13:21.34:156,21,0
chr10	56868727	.	G	GAC	1636.64	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=10.625;DP=673;FS=0.000;HRun=0;HaplotypeScore=179.0041;InbreedingCoeff=0.6146;MQ=61.61;MQ0=26;MQRankSum=-9.949;QD=8.06;ReadPosRankSum=-2.080;VQSLOD=2.9815;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:72.10:0,72,1042	1/1:3,0:3:5.99:49,6,0	0/0:29,0:19:23.15:0,23,540	0/0:57,0:30:7.62:0,8,357	0/0:24,0:22:63.20:0,63,942	0/0:28,0:26:47.95:0,48,732	0/0:22,0:17:36.09:0,36,506	1/1:42,4:45:51.22:836,51,0	1/1:15,0:15:8.90:63,9,0	1/1:14,0:14:4.78:106,5,0	0/1:18,0:17:0:0,0,0	0/0:33,0:33:90.29:0,90,1354	0/0:24,0:24:60.20:0,60,917	0/0:23,0:22:57.17:0,57,849	0/0:23,0:23:0:0,0,0	0/0:30,0:27:60.10:0,60,918	0/0:33,0:29:63.11:0,63,887	0/0:20,0:20:48.60:0,49,710	0/1:19,0:15:23.96:93,0,24	0/1:16,0:15:6.28:82,0,6	0/0:19,0:16:6.86:0,7,60	0/0:11,0:11:30.10:0,30,459	0/0:31,0:28:69.22:0,69,1032	0/0:29,0:27:57.19:0,57,872	0/1:15,0:13:0:0,0,0	0/1:15,0:15:16.83:144,0,17	1/1:24,0:24:37.90:270,38,0	1/1:18,0:17:23.68:168,24,0
chr10	56868731	.	CAGAGAG	C	4912.63	PASS	AB=0.768;AC=16;AF=0.286;AN=56;BaseQRankSum=10.084;DP=673;FS=5.588;HRun=0;HaplotypeScore=201.4102;InbreedingCoeff=0.6129;MQ=65.38;MQ0=23;MQRankSum=-9.761;QD=26.84;ReadPosRankSum=-3.395;VQSLOD=3.6217;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:69.21:0,69,2213	0/1:4,1:5:6.27:57,0,6	0/0:31,0:22:32.38:0,32,1213	0/0:64,0:35:35.21:0,35,1013	0/0:25,0:23:63.22:0,63,2118	0/0:25,0:23:48.16:0,48,1167	0/0:25,0:20:37.66:0,38,760	1/1:30,10:39:90.52:1032,91,0	0/1:5,9:14:13.38:192,0,13	1/1:4,10:14:41.09:731,41,0	0/0:6,12:17:5.98:0,6,17	0/0:31,0:31:90.30:0,90,2257	0/0:26,0:26:63.17:0,63,1880	0/0:22,0:21:57.20:0,57,1960	0/0:8,18:26:3.89:0,4,11	0/0:28,0:25:60.21:0,60,1532	0/0:29,0:25:56.99:0,57,1332	0/0:20,0:20:34.18:0,34,1202	0/1:9,8:14:45.01:508,0,45	1/1:7,11:17:17.25:213,17,0	0/1:18,1:16:25.69:26,0,31	0/0:11,0:11:30.10:0,30,782	0/0:31,0:28:48.25:0,48,1704	0/0:28,0:27:7.16:0,7,1367	0/0:10,5:13:6.11:0,6,18	1/1:8,8:16:45.06:803,45,0	1/1:5,17:22:41.80:813,42,0	1/1:9,9:18:29.83:537,30,0
chr10	56868737	.	G	GAGAC	6089.05	PASS	AB=0.895;AC=25;AF=0.446;AN=56;BaseQRankSum=4.047;DP=698;FS=2.735;HRun=0;HaplotypeScore=188.9199;InbreedingCoeff=0.6396;MQ=69.23;MQ0=18;MQRankSum=-8.741;QD=19.90;ReadPosRankSum=-4.536;VQSLOD=4.0310;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:69.16:0,69,1114	1/1:5,0:5:7.77:62,8,0	0/0:41,0:29:45.83:0,46,851	0/0:73,0:43:76.48:0,76,927	0/0:24,0:23:66.19:0,66,1084	0/1:27,0:25:44.91:45,0,400	0/0:24,0:20:7.98:0,8,256	1/1:39,0:38:95.30:991,95,0	1/1:14,0:14:12.04:253,12,0	1/1:10,5:15:42.14:940,42,0	0/1:14,4:18:0:0,0,0	0/0:32,0:32:62.16:0,62,833	0/0:25,0:25:59.95:0,60,973	0/0:24,0:23:57.18:0,57,949	0/0:20,7:28:0.47:0,0,1	0/1:27,0:25:4.95:5,0,540	0/0:31,0:27:33.11:0,33,536	0/0:20,0:20:27.74:0,28,454	1/1:11,9:18:45.04:866,45,0	1/1:16,0:16:18.06:340,18,0	1/1:16,0:14:2.94:76,3,0	0/0:12,0:12:8.07:0,8,279	0/1:31,0:29:21.84:22,0,588	0/0:26,0:25:1.13:0,1,485	0/1:8,7:14:0:0,0,0	1/1:18,0:18:51.14:972,51,0	1/1:18,5:23:42.14:929,42,0	1/1:9,12:21:30.03:589,30,0
chr10	56869308	.	CA	C	1500.62	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.102;DP=643;FS=14.785;HRun=1;HaplotypeScore=64.4440;InbreedingCoeff=0.9909;MQ=90.83;MQ0=0;MQRankSum=-3.885;QD=38.48;ReadPosRankSum=-3.300;VQSLOD=1.3792;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,111,1746	1/1:0,5:5:15.05:210,15,0	0/0:28,0:28:81.28:0,81,1290	0/0:22,1:22:48.65:0,49,926	0/0:25,0:25:72.25:0,72,1148	0/0:33,0:33:99:0,99,1579	0/0:22,0:22:66.23:0,66,1055	1/1:0,34:34:99:1409,102,0	0/0:14,0:14:42.14:0,42,665	0/0:30,0:30:90.30:0,90,1410	0/0:24,0:24:72.23:0,72,1125	0/0:18,0:18:54.18:0,54,847	0/0:26,0:26:78.23:0,78,1197	0/0:15,0:15:45.11:0,45,650	0/0:33,0:33:99:0,99,1582	0/0:31,0:31:93.29:0,93,1442	0/0:29,0:29:87.30:0,87,1383	0/0:21,0:21:63.17:0,63,979	0/0:23,0:23:69.18:0,69,1033	0/0:20,0:20:60.19:0,60,932	0/0:10,0:10:30.10:0,30,480	0/0:24,0:24:72.21:0,72,1102	0/0:21,0:21:63.21:0,63,1003	0/0:14,0:14:39.13:0,39,623	0/0:22,0:22:66.21:0,66,1032	0/0:23,0:23:69.24:0,69,1103	0/0:29,0:28:87.28:0,87,1353	0/0:9,0:9:27.09:0,27,431
chr10	56871025	.	T	TG	232.16	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-3.429;DP=619;FS=2.806;HRun=7;HaplotypeScore=63.0635;InbreedingCoeff=0.9973;MQ=77.14;MQ0=0;MQRankSum=-1.154;QD=16.58;ReadPosRankSum=-0.222;VQSLOD=3.5321;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:78.11:0,78,749	0/0:14,0:14:33.05:0,33,318	0/0:26,0:24:50.22:0,50,455	0/0:24,0:22:35.31:0,35,324	0/0:21,0:21:45.07:0,45,434	0/0:21,0:21:60.08:0,60,573	0/0:18,0:18:45.05:0,45,428	0/0:30,0:30:63.07:0,63,598	0/0:18,0:18:54.08:0,54,516	0/0:15,0:16:44.10:0,44,411	0/0:14,0:14:42.03:0,42,397	0/0:29,0:29:75.07:0,75,710	0/0:22,0:22:66.11:0,66,637	0/0:22,0:22:60.07:0,60,570	0/0:22,0:22:57.07:0,57,545	1/1:2,12:14:27.08:326,27,0	0/0:36,0:36:96.10:0,96,912	0/0:23,0:23:60.09:0,60,579	0/0:21,0:21:48.06:0,48,460	0/0:18,0:18:42.05:0,42,400	0/0:30,0:30:81.07:0,81,760	0/0:23,0:23:63.08:0,63,602	0/0:26,0:26:72.10:0,72,689	0/0:34,0:34:90.10:0,90,851	0/0:18,0:18:51.04:0,51,478	0/0:24,0:24:63.10:0,63,608	0/0:14,0:14:39.06:0,39,377	0/0:9,0:9:26.98:0,27,241
chr10	56874848	.	TGACA	T	20318.77	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=9.209;DP=643;FS=5.840;HRun=0;HaplotypeScore=120.0834;InbreedingCoeff=0.9882;MQ=96.09;MQ0=2;MQRankSum=-7.812;QD=41.98;ReadPosRankSum=4.315;VQSLOD=5.2813;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,108,2705	1/1:1,5:6:9.03:166,9,0	0/0:28,0:28:69.20:0,69,1623	0/0:39,0:39:84.77:0,85,1991	0/0:22,0:22:63.22:0,63,1655	1/1:1,16:16:42.14:772,42,0	1/1:4,22:26:48.16:883,48,0	1/1:7,22:29:66.19:1134,66,0	1/1:5,30:35:78.27:1435,78,0	1/1:3,19:22:60.18:1072,60,0	1/1:0,19:19:57.15:987,57,0	1/1:2,27:29:66.23:1214,66,0	0/0:13,0:13:36.12:0,36,932	0/0:20,0:20:51.18:0,51,1339	1/1:1,27:28:72.25:1325,72,0	1/1:2,23:25:60.21:1102,60,0	1/1:5,16:21:42.14:773,42,0	1/1:1,17:17:45.11:793,45,0	1/1:6,20:26:60.16:1011,60,0	1/1:1,13:14:39.13:717,39,0	1/1:3,23:26:54.09:958,54,0	1/1:0,14:14:42.14:772,42,0	1/1:2,13:15:33.11:607,33,0	1/1:7,28:35:60.12:1104,60,0	1/1:1,20:21:57.20:1042,57,0	1/1:2,17:19:48.15:852,48,0	1/1:0,18:18:39.13:717,39,0	1/1:0,21:21:48.16:883,48,0
chr10	56875814	.	GCGTAGCA	G	11460.68	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=10.983;DP=582;FS=23.451;HRun=0;HaplotypeScore=152.6978;InbreedingCoeff=0.9918;MQ=89.76;MQ0=0;MQRankSum=-16.434;QD=58.47;ReadPosRankSum=0.662;VQSLOD=2.7434;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,126,4542	0/0:9,0:9:18.06:0,18,692	0/0:20,0:20:51.18:0,51,1827	0/0:32,0:31:65.22:0,65,2269	0/0:13,0:13:39.13:0,39,1406	0/0:24,0:24:60.21:0,60,2166	0/0:21,0:21:51.17:0,51,1924	0/0:33,0:33:84.29:0,84,3053	1/1:1,18:19:45.15:1151,45,0	1/1:4,24:28:72.25:1846,72,0	1/1:3,7:10:15.05:360,15,0	0/0:34,0:34:84.29:0,84,3057	0/0:18,0:18:51.18:0,51,1977	0/0:17,0:17:48.16:0,48,1754	1/1:1,21:22:51.18:1303,51,0	0/0:27,0:27:78.25:0,78,2995	0/0:24,0:24:54.13:0,54,2128	0/0:12,0:12:36.10:0,36,1226	1/1:4,16:20:48.14:1123,48,0	1/1:1,8:9:24.08:607,24,0	1/1:2,21:23:41.96:1017,42,0	0/0:19,0:19:54.19:0,54,2093	0/0:13,0:13:36.12:0,36,1307	0/0:26,0:26:54.18:0,54,2092	1/1:2,15:17:42.14:1054,42,0	1/1:3,19:22:54.17:1314,54,0	1/1:3,19:22:54.19:1377,54,0	1/1:0,4:4:12.04:308,12,0
chr10	56875866	.	A	AC	4905.41	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-1.542;DP=462;FS=17.711;HRun=8;HaplotypeScore=100.2478;InbreedingCoeff=0.7935;MQ=82.54;MQ0=0;MQRankSum=-2.539;QD=14.51;ReadPosRankSum=1.588;VQSLOD=3.4705;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:36:75.68:0,76,652	1/1:3,6:9:18.05:208,18,0	0/0:24,0:24:40.39:0,40,302	0/0:13,0:12:3.47:0,3,48	0/0:16,1:17:1.39:0,1,260	1/1:5,14:19:27.08:312,27,0	1/1:0,18:18:45.13:519,45,0	1/1:7,13:20:39.06:424,39,0	1/1:7,0:12:22.92:125,23,0	1/1:10,0:14:20.19:115,20,0	1/1:6,0:7:2.84:14,3,0	1/1:2,24:26:60.17:686,60,0	0/0:12,0:13:35.22:0,35,303	0/0:21,0:21:44.99:0,45,411	1/1:12,0:17:19.06:112,19,0	1/1:2,12:14:27.08:312,27,0	1/1:4,19:23:39.12:450,39,0	1/1:1,4:5:12.04:139,12,0	1/1:10,1:13:11.53:78,12,0	1/1:6,0:12:16.02:77,16,0	1/1:16,1:23:14.69:113,15,0	1/1:4,10:14:30.08:339,30,0	1/1:3,11:14:21.06:242,21,0	1/1:6,15:21:2.63:284,3,0	1/1:14,0:17:11.52:69,12,0	1/1:11,0:16:17.13:97,17,0	1/1:12,0:16:34.54:191,35,0	1/1:7,0:8:0.47:1,0,0
chr10	56879974	.	A	AT	1162.70	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-7.296;DP=698;FS=10.903;HRun=9;HaplotypeScore=68.9046;InbreedingCoeff=0.9966;MQ=76.34;MQ0=0;MQRankSum=0.992;QD=21.94;ReadPosRankSum=-4.851;VQSLOD=1.7694;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:95.98:0,96,833	1/1:3,14:18:41.95:446,42,0	0/0:24,0:24:41.87:0,42,354	0/0:20,0:20:19.75:0,20,354	0/0:27,0:29:29.15:0,29,468	0/0:19,0:20:53.03:0,53,449	0/0:18,0:20:52.04:0,52,425	1/1:6,29:35:58.11:839,58,0	0/0:30,0:30:83.96:0,84,724	0/0:27,0:27:68.94:0,69,593	0/0:28,0:29:83.02:0,83,709	0/0:19,0:20:53.01:0,53,445	0/0:17,0:17:41.97:0,42,361	0/0:24,0:25:68:0,68,575	0/0:28,0:29:76.99:0,77,653	0/0:36,0:36:95.95:0,96,833	0/0:26,0:26:68.97:0,69,595	0/0:19,0:19:44.97:0,45,391	0/0:17,0:18:50.01:0,50,419	0/0:30,0:30:83.96:0,84,723	0/0:29,0:30:77.02:0,77,657	0/0:18,0:18:44.96:0,45,387	0/0:20,0:20:50.99:0,51,443	0/0:20,0:21:62.03:0,62,527	0/0:26,0:26:74.97:0,75,651	0/0:32,0:34:84.54:0,85,714	0/0:29,0:28:68.96:0,69,599	0/0:15,0:15:32.98:0,33,286
chr10	56881262	.	TTTCTTTC	T	732.33	PASS	AB=1.000;AC=12;AF=0.214;AN=56;BaseQRankSum=-2.890;DP=490;FS=0.610;HRun=0;HaplotypeScore=120.2886;InbreedingCoeff=0.0980;MQ=56.79;MQ0=12;MQRankSum=0.001;QD=4.28;ReadPosRankSum=-4.288;VQSLOD=1.0139;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:43.79:0,44,1024	1/1:5,11:16:7.31:376,7,0	0/1:9,0:4:4.36:4,0,25	0/0:5,0:1:2.92:0,3,17	0/0:26,0:25:53.56:0,54,1086	0/0:15,0:15:39.57:0,40,842	0/0:15,0:14:27.23:0,27,312	1/1:24,0:22:9.61:185,10,0	0/1:12,0:12:80.23:80,0,105	0/1:19,0:18:73.78:74,0,185	0/1:15,0:15:44.99:45,0,121	0/0:20,0:20:51.12:0,51,980	0/0:12,0:12:27.02:0,27,672	0/0:16,0:15:34.74:0,35,701	0/0:22,0:22:25.92:0,26,157	0/0:18,0:18:13.79:0,14,231	0/0:26,0:26:56.36:0,56,600	0/0:18,0:17:13.90:0,14,538	0/1:23,0:17:7.68:8,0,117	0/1:23,0:23:19.88:20,0,322	0/1:13,0:13:82.14:82,0,130	0/0:26,0:26:41.84:0,42,611	0/0:14,0:14:28.96:0,29,792	0/0:20,0:19:42.24:0,42,431	0/1:17,0:17:7.34:7,0,40	0/0:15,0:13:1.90:0,2,145	0/0:27,0:27:20.12:0,20,141	0/0:5,0:5:14.60:0,15,126
chr10	56881266	.	TTTC	T	2800.54	PASS	AB=0.768;AC=26;AF=0.464;AN=56;BaseQRankSum=-5.154;DP=501;FS=6.471;HRun=0;HaplotypeScore=85.5478;InbreedingCoeff=0.7812;MQ=58.05;MQ0=11;MQRankSum=2.419;QD=11.52;ReadPosRankSum=-1.339;VQSLOD=1.9569;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:43.42:0,43,528	1/1:15,0:15:1.43:138,1,0	0/1:12,0:6:1.43:1,0,42	0/0:5,0:1:2.92:0,3,17	0/0:26,0:25:50.34:0,50,531	0/0:17,0:17:42.36:0,42,410	0/0:13,0:12:19.72:0,20,138	1/1:24,0:23:6.68:172,7,0	1/1:11,0:11:29.94:276,30,0	1/1:18,0:17:37.53:323,38,0	1/1:2,13:15:29.80:298,30,0	0/0:20,0:20:49.76:0,50,454	0/0:16,0:16:35.79:0,36,413	0/0:15,0:14:30.41:0,30,371	0/1:3,19:22:17.43:231,0,17	0/0:19,0:19:10.78:0,11,103	0/0:27,0:27:48.48:0,48,285	0/0:18,0:17:30.46:0,30,263	1/1:21,0:16:17.18:188,17,0	1/1:5,15:20:10.51:242,11,0	1/1:15,0:15:6.93:151,7,0	0/0:26,0:26:32.59:0,33,247	0/0:15,0:15:30.94:0,31,362	0/0:19,0:18:30.06:0,30,176	1/1:2,17:19:11.99:170,12,0	1/1:2,16:16:41.97:420,42,0	1/1:4,25:29:14.26:267,14,0	1/1:2,2:4:10.84:133,11,0
chr10	56881269	.	CT	C	881.51	PASS	AB=0.915;AC=22;AF=0.393;AN=56;BaseQRankSum=0.161;DP=524;FS=0.481;HRun=14;HaplotypeScore=84.7842;InbreedingCoeff=-0.0706;MQ=58.84;MQ0=12;MQRankSum=2.125;QD=2.47;ReadPosRankSum=4.519;VQSLOD=-0.4605;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:37.16:0,37,308	0/0:15,0:15:3.33:0,3,58	0/1:14,0:7:2.18:2,0,59	0/0:8,0:2:2.96:0,3,19	0/0:26,0:25:34:0,34,285	0/1:13,6:19:33.54:98,0,34	1/1:6,6:11:9.24:124,9,0	0/0:19,0:26:32.27:0,32,147	0/0:10,0:14:17.73:0,18,97	0/0:13,0:15:17.28:0,17,92	0/1:15,0:15:0.10:0,0,28	0/1:13,8:21:39.67:157,0,40	0/0:18,0:18:41.72:0,42,348	0/1:16,0:16:8.63:9,0,176	0/1:23,0:23:8.18:8,0,51	0/1:18,0:18:9.43:9,0,35	1/1:13,13:26:10.43:197,10,0	0/1:7,10:17:3.11:135,0,3	0/1:18,1:16:1.51:2,0,67	0/1:19,1:20:11.11:11,0,41	0/1:7,1:18:10.37:10,0,55	0/1:25,0:25:8.37:30,0,8	0/1:11,5:16:43.98:83,0,44	1/1:11,7:18:16.92:122,17,0	0/1:19,0:19:2.08:8,0,2	0/0:18,0:16:0.47:0,0,30	0/1:29,1:30:20.32:31,0,20	0/1:6,0:6:0.51:1,0,11
chr10	56881270	.	T	TTTCTTTCTTTC	3990.64	PASS	AB=0.850;AC=19;AF=0.339;AN=56;BaseQRankSum=-4.277;DP=542;FS=12.083;HRun=0;HaplotypeScore=172.0556;InbreedingCoeff=0.7313;MQ=59.90;MQ0=11;MQRankSum=-4.090;QD=18.22;ReadPosRankSum=2.874;VQSLOD=2.2165;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:58.26:0,58,940	0/0:15,0:15:23.59:0,24,319	0/1:15,0:8:2.09:2,0,60	0/0:9,0:2:2.96:0,3,19	0/0:26,0:25:49.01:0,49,914	1/1:21,0:21:33.79:514,34,0	1/1:12,0:11:29.76:253,30,0	0/0:27,0:26:29.98:0,30,154	0/0:15,0:15:33.43:0,33,370	0/0:17,0:16:38.71:0,39,491	0/0:15,0:15:28.22:0,28,382	1/1:21,0:21:53.71:619,54,0	0/0:18,0:18:44.91:0,45,629	0/1:18,0:17:20.03:20,0,524	0/0:23,0:23:23.86:0,24,452	0/1:4,11:22:15.84:332,0,16	1/1:26,0:26:54.84:570,55,0	1/1:16,0:17:42.06:391,42,0	0/0:21,0:17:11.84:0,12,327	0/0:20,0:20:18.52:0,19,404	0/0:18,0:18:9.73:0,10,251	1/1:2,20:31:29.72:368,30,0	1/1:16,0:16:40.57:548,41,0	1/1:19,0:18:31.66:372,32,0	0/0:19,0:19:11.63:0,12,247	0/0:18,0:16:38.44:0,38,494	0/0:30,0:30:5.41:0,5,352	0/0:7,0:7:16.44:0,16,340
chr10	56882567	.	G	GCACA	4286.96	PASS	AB=0.885;AC=22;AF=0.407;AN=54;BaseQRankSum=-7.461;DP=554;FS=2.321;HRun=0;HaplotypeScore=105.2324;InbreedingCoeff=0.2075;MQ=61.32;MQ0=10;MQRankSum=-0.105;QD=13.11;ReadPosRankSum=0.473;VQSLOD=4.1241;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:34:51.16:0,51,746	0/0:7,0:7:18.06:0,18,270	./.	0/1:14,0:6:7.01:7,0,14	0/0:14,0:14:30.09:0,30,429	1/1:4,11:18:12.04:289,12,0	1/1:8,14:25:15.05:327,15,0	0/0:24,0:22:30.07:0,30,396	0/1:17,0:17:5.02:5,0,257	0/1:21,0:18:41.13:41,0,123	0/1:16,0:16:25.88:26,0,202	0/1:8,5:15:30.73:245,0,31	0/0:20,0:21:42.11:0,42,583	0/0:17,0:17:33.07:0,33,494	0/1:20,0:20:30.51:31,0,243	0/1:3,11:14:66.10:479,0,66	0/1:13,21:37:13.73:606,0,14	1/1:16,26:46:53.28:1151,53,0	0/1:18,0:16:13.75:14,0,76	0/0:12,0:12:15.04:0,15,173	0/0:29,0:27:37.22:0,37,434	1/1:5,0:5:5.97:91,6,0	1/1:2,2:6:3.01:72,3,0	1/1:14,21:40:38.87:880,39,0	0/0:13,0:13:18.01:0,18,197	0/0:20,0:19:17.62:0,18,191	0/0:32,0:32:35.35:0,35,449	0/1:12,0:12:23.50:24,0,90
chr10	56884754	.	CCACT	C	10327.75	PASS	AB=0.537;AC=17;AF=0.304;AN=56;BaseQRankSum=16.023;DP=764;FS=4.692;HRun=0;HaplotypeScore=129.5318;InbreedingCoeff=0.9192;MQ=72.59;MQ0=0;MQRankSum=-4.805;QD=38.83;ReadPosRankSum=5.990;VQSLOD=4.4288;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,123,3176	0/0:11,0:11:27.09:0,27,685	0/0:11,0:11:27.09:0,27,653	0/0:16,0:16:32.24:0,32,731	0/0:16,0:16:39.13:0,39,1029	1/1:4,33:37:78.22:1399,78,0	1/1:6,30:36:72.20:1288,72,0	0/0:31,0:31:90.31:0,90,2327	0/0:24,0:24:69.24:0,69,1821	0/0:23,0:23:57.20:0,57,1453	0/0:15,0:15:42.14:0,42,1064	0/1:4,25:29:12.99:1092,0,13	0/0:27,0:27:81.28:0,81,2066	0/0:35,0:35:93.31:0,93,2381	0/0:44,0:44:99:0,117,2966	1/1:2,34:37:96.33:1763,96,0	1/1:0,36:36:78.27:1435,78,0	1/1:2,29:31:69.24:1265,69,0	0/0:19,0:19:51.18:0,51,1328	0/0:18,0:18:45.14:0,45,1059	0/0:71,0:71:99:0,196,5010	1/1:0,16:16:42.14:772,42,0	1/1:4,13:17:30.10:552,30,0	1/1:3,24:27:42.11:763,42,0	0/0:20,0:20:57.20:0,57,1471	0/0:32,0:32:93.32:0,93,2433	0/0:27,0:27:66.21:0,66,1645	0/0:14,0:14:42.13:0,42,1031
chr10	56890401	.	CTT	C	1827.92	PASS	AC=22;AF=0.423;AN=52;BaseQRankSum=3.492;DP=281;FS=34.746;HRun=12;HaplotypeScore=46.2125;InbreedingCoeff=0.9131;MQ=89.47;MQ0=2;MQRankSum=-1.249;QD=20.77;ReadPosRankSum=3.805;VQSLOD=0.4229;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:72.20:0,72,1014	./.	0/0:21,0:16:22.83:0,23,231	0/0:28,1:18:28.50:0,28,238	0/0:3,0:3:9.03:0,9,134	0/0:5,0:5:15.04:0,15,203	0/0:6,0:6:18.05:0,18,249	0/0:4,0:11:20.48:0,20,106	1/1:1,6:7:18.03:183,18,0	1/1:2,8:10:24.05:244,24,0	1/1:0,2:2:6.01:61,6,0	0/0:4,0:4:6.02:0,6,90	0/0:6,0:8:20.53:0,21,232	0/0:9,0:9:18.05:0,18,249	1/1:2,5:7:15.02:153,15,0	./.	0/0:22,0:22:57.18:0,57,829	0/0:27,0:29:77.75:0,78,1120	1/1:8,9:17:27.01:274,27,0	1/1:0,3:3:9.02:92,9,0	1/1:5,4:9:14.95:144,15,0	0/0:2,0:2:6.02:0,6,89	0/0:4,0:4:12.04:0,12,177	0/0:7,0:8:20.51:0,21,252	1/1:0,6:6:15.03:153,15,0	1/1:1,10:11:30.07:305,30,0	1/1:2,7:9:21.04:214,21,0	1/1:0,7:7:21.05:214,21,0
chr10	56891476	.	A	AT	3912.39	PASS	AB=0.607;AC=21;AF=0.375;AN=56;BaseQRankSum=-9.028;DP=471;FS=2.273;HRun=10;HaplotypeScore=47.5889;InbreedingCoeff=0.9189;MQ=73.20;MQ0=1;MQRankSum=-0.712;QD=22.23;ReadPosRankSum=0.881;VQSLOD=4.4891;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,1:28:43.94:0,44,515	0/0:8,0:8:20.97:0,21,172	0/0:12,0:11:26.62:0,27,202	0/0:15,0:14:18.25:0,18,183	0/0:16,0:16:38.94:0,39,318	0/0:17,0:17:41.94:0,42,345	0/0:9,0:9:20.97:0,21,172	0/0:19,0:19:41.92:0,42,343	1/1:5,9:14:8.41:283,8,0	1/1:3,14:17:39.08:407,39,0	1/1:4,15:19:23.27:424,23,0	0/0:18,0:18:50.93:0,51,418	0/0:15,0:15:22.90:0,23,301	0/0:13,0:13:35.94:0,36,296	1/1:3,17:20:42.11:448,42,0	0/0:24,0:24:65.91:0,66,540	0/0:31,1:32:60.90:0,61,704	0/0:26,0:26:65.84:0,66,534	1/1:3,17:21:50.97:515,51,0	1/1:3,17:20:45.01:453,45,0	1/1:1,6:7:15.04:160,15,0	0/0:16,0:16:38.93:0,39,316	0/0:11,0:11:20.96:0,21,172	0/0:16,0:16:44.87:0,45,355	0/1:6,11:17:7.19:336,0,7	1/1:2,13:15:39.08:407,39,0	1/1:6,12:18:27.07:288,27,0	1/1:2,6:8:18.05:192,18,0
chr10	56891654	.	CTT	C	785.50	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.151;DP=661;FS=1.739;HRun=5;HaplotypeScore=74.1904;InbreedingCoeff=0.9973;MQ=82.14;MQ0=1;MQRankSum=-2.065;QD=31.42;ReadPosRankSum=-1.990;VQSLOD=3.0360;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,157,2810	1/1:1,7:8:21.07:294,21,0	0/0:24,0:24:69.20:0,69,1108	0/0:19,0:18:39.11:0,39,667	0/0:27,0:27:78.27:0,78,1422	0/0:17,0:17:48.11:0,48,809	0/0:31,0:31:90.29:0,90,1610	1/1:1,16:17:45.14:612,45,0	0/0:22,0:22:63.22:0,63,1155	0/0:23,0:23:69.22:0,69,1186	0/0:16,0:16:48.16:0,48,852	0/0:26,0:26:78.27:0,78,1414	0/0:20,0:20:60.21:0,60,1091	0/0:19,0:19:54.18:0,54,962	0/0:23,0:23:63.22:0,63,1155	0/0:24,0:24:72.25:0,72,1306	0/0:26,0:26:72.25:0,72,1310	0/0:25,0:25:75.25:0,75,1339	0/0:23,0:23:66.20:0,66,1123	0/0:20,0:20:60.18:0,60,1033	0/0:40,0:40:99:0,117,2134	0/0:24,0:24:66.22:0,66,1167	0/0:14,0:14:36.12:0,36,629	0/0:41,0:41:99:0,111,1960	0/0:21,0:21:57.19:0,57,1018	0/0:26,0:26:78.25:0,78,1357	0/0:21,0:21:63.22:0,63,1154	0/0:11,0:11:27.09:0,27,493
chr10	56892568	.	CT	C	1655.12	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.101;DP=582;FS=0.000;HRun=2;HaplotypeScore=59.5868;InbreedingCoeff=0.9996;MQ=76.38;MQ0=0;MQRankSum=-0.725;QD=35.22;ReadPosRankSum=-2.232;VQSLOD=2.9841;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,126,1862	1/1:0,13:13:36.09:467,36,0	0/0:16,0:16:42.38:0,42,602	0/0:13,0:12:30:0,30,411	0/0:28,0:28:84.28:0,84,1248	0/0:21,0:21:63.21:0,63,939	0/0:18,0:18:54.17:0,54,779	1/1:0,34:34:99:1309,102,0	0/0:26,0:26:78.26:0,78,1155	0/0:30,0:30:90.30:0,90,1328	0/0:14,0:14:42.13:0,42,611	0/0:16,0:16:48.15:0,48,700	0/0:20,0:20:57.19:0,57,845	0/0:16,0:16:48.16:0,48,719	0/0:17,0:17:51.17:0,51,765	0/0:16,0:16:48.16:0,48,710	0/0:23,0:23:69.22:0,69,1013	0/0:24,0:24:69.17:0,69,988	0/0:27,0:27:81.27:0,81,1208	0/0:18,0:18:51.17:0,51,764	0/0:17,0:17:51.13:0,51,726	0/0:20,0:20:57.18:0,57,835	0/0:13,0:13:39.13:0,39,584	0/0:14,0:14:42.14:0,42,629	0/0:19,0:19:54.17:0,54,791	0/0:25,0:25:75.25:0,75,1124	0/0:26,0:26:72.24:0,72,1079	0/0:15,0:15:45.15:0,45,675
chr10	56892798	.	TTGTGTG	T	2490.42	PASS	AC=20;AF=0.370;AN=54;BaseQRankSum=7.884;DP=520;FS=11.555;HRun=0;HaplotypeScore=112.6157;InbreedingCoeff=0.8496;MQ=59.43;MQ0=9;MQRankSum=-5.458;QD=15.28;ReadPosRankSum=-1.033;VQSLOD=1.7487;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:66.70:0,67,1816	0/0:5,0:5:9.03:0,9,248	./.	0/0:20,0:14:6.02:0,6,103	0/0:20,0:21:36.12:0,36,924	0/0:24,0:24:21.07:0,21,556	0/0:23,0:22:39.12:0,39,1043	0/0:28,0:28:11.86:0,12,505	1/1:7,4:13:12.51:247,13,0	1/1:13,14:28:35.40:625,35,0	1/1:5,5:10:3.01:62,3,0	0/0:18,0:18:24.06:0,24,562	0/0:4,0:11:12.02:0,12,279	0/0:25,0:26:45.61:0,46,1067	1/1:8,6:15:15.52:291,16,0	0/0:11,0:11:18.06:0,18,449	0/0:29,0:28:51.15:0,51,1291	0/0:14,0:14:33.11:0,33,886	1/1:9,5:15:18.01:284,18,0	1/1:11,3:14:3.95:63,4,0	0/0:6,0:13:0:0,0,0	0/0:12,0:11:18.53:0,19,474	0/0:17,0:16:24.08:0,24,651	0/0:27,0:27:42.14:0,42,1148	1/1:9,9:18:18.06:365,18,0	1/1:13,8:24:27.03:456,27,0	1/1:5,4:10:15.03:232,15,0	1/1:7,5:14:3.01:62,3,0
chr10	56892833	.	T	TGC	2262.47	PASS	AB=0.960;AC=31;AF=0.596;AN=52;BaseQRankSum=0.321;DP=454;FS=24.617;HRun=0;HaplotypeScore=78.7634;InbreedingCoeff=0.1277;MQ=58.02;MQ0=11;MQRankSum=-1.087;QD=6.71;ReadPosRankSum=0.805;VQSLOD=1.3931;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:83.76:0,84,758	0/0:7,0:7:11.83:0,12,97	./.	./.	0/0:18,0:18:26.91:0,27,246	0/1:4,15:20:24.49:134,0,24	1/1:23,0:23:35.71:317,36,0	0/0:18,0:18:14.95:0,15,124	1/1:10,0:10:9.14:39,9,0	0/1:27,0:26:25.46:189,0,25	1/1:9,0:9:3.18:67,3,0	1/1:9,8:18:3.01:49,3,0	0/1:10,0:10:28.63:46,0,29	0/0:22,0:22:29.93:0,30,266	0/1:9,0:9:19.20:19,0,23	1/1:5,6:11:11.25:153,11,0	1/1:10,17:27:21.07:340,21,0	0/1:16,0:16:6.54:172,0,7	0/1:12,0:11:20.26:27,0,20	1/1:9,0:8:4.55:29,5,0	1/1:27,0:26:28.60:223,29,0	1/1:14,0:13:14.73:110,15,0	0/1:12,0:11:8.91:53,0,9	1/1:11,20:31:18.06:289,18,0	0/1:16,0:16:4.25:64,0,4	0/1:15,0:15:10.97:46,0,11	0/1:7,0:7:2.21:2,0,7	0/1:12,0:12:8.47:65,0,8
chr10	56893799	.	A	AT	3901.49	PASS	AB=0.555;AC=19;AF=0.339;AN=56;BaseQRankSum=-11.469;DP=546;FS=0.377;HRun=9;HaplotypeScore=53.9459;InbreedingCoeff=0.7388;MQ=62.19;MQ0=0;MQRankSum=-1.728;QD=21.32;ReadPosRankSum=-0.001;VQSLOD=4.0352;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,123,1053	0/0:10,0:10:23.98:0,24,208	0/0:6,0:6:11.99:0,12,102	0/0:10,0:8:14.98:0,15,128	0/0:27,0:27:74.96:0,75,647	0/0:15,0:15:38.99:0,39,339	0/0:37,0:37:92.95:0,93,807	0/0:30,0:30:74.96:0,75,648	0/1:3,16:19:16.02:288,0,16	1/1:3,13:17:38.92:403,39,0	0/1:1,9:10:2.03:195,0,2	0/0:20,0:20:50.93:0,51,434	0/0:23,0:23:62.98:0,63,547	0/0:16,0:16:35.97:0,36,309	1/1:2,24:26:54.15:597,54,0	0/0:23,3:26:29.78:0,30,482	0/0:29,0:29:71.02:0,71,605	0/0:23,0:23:56.94:0,57,488	0/1:9,19:28:35.02:553,0,35	1/1:1,7:8:18.04:192,18,0	1/1:2,13:15:6.62:282,7,0	0/0:8,0:8:20.96:0,21,175	0/0:8,0:8:20.99:0,21,182	0/0:27,0:27:68.97:0,69,595	1/1:1,9:10:27.07:299,27,0	1/1:3,20:23:14.18:601,14,0	1/1:7,15:23:22.05:457,22,0	1/1:0,4:4:3.01:33,3,0
chr10	56893852	.	TC	T	1098.23	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.721;DP=615;FS=12.399;HRun=1;HaplotypeScore=76.7391;InbreedingCoeff=0.9962;MQ=60.31;MQ0=4;MQRankSum=-0.471;QD=35.43;ReadPosRankSum=-3.067;VQSLOD=1.5282;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,114,1780	1/1:0,7:7:21.07:294,21,0	0/0:36,0:26:75.24:0,75,1146	0/0:32,0:21:61.09:0,61,947	0/0:29,0:29:87.23:0,87,1336	0/0:14,0:14:36.12:0,36,574	0/0:26,0:26:75.26:0,75,1190	1/1:0,24:23:69.18:925,69,0	0/0:17,0:17:42.14:0,42,669	0/0:14,0:14:42.14:0,42,670	0/0:10,0:10:29.98:0,30,395	0/0:21,0:21:57.19:0,57,905	0/0:27,0:27:81.26:0,81,1262	0/0:14,0:14:39.13:0,39,615	0/0:36,0:36:96.28:0,96,1495	0/0:24,0:24:63.12:0,63,948	0/0:31,0:31:87.30:0,87,1384	0/0:25,0:25:72.13:0,72,1117	0/0:23,0:21:63.21:0,63,999	0/0:16,0:16:48.16:0,48,746	0/0:30,0:30:90.07:0,90,1376	0/0:8,0:8:24.08:0,24,383	0/0:14,0:14:42.14:0,42,671	0/0:32,0:32:92.82:0,93,1485	0/0:12,0:12:36.12:0,36,574	0/0:17,0:17:51.16:0,51,792	0/0:20,0:20:60.19:0,60,934	0/0:11,0:11:33.11:0,33,526
chr10	56896159	.	TGCTC	T	8597.05	PASS	AB=0.956;AC=24;AF=0.429;AN=56;BaseQRankSum=-11.026;DP=634;FS=20.017;HRun=0;HaplotypeScore=193.6602;InbreedingCoeff=-0.2742;MQ=64.08;MQ0=3;MQRankSum=6.540;QD=18.41;ReadPosRankSum=-0.027;VQSLOD=3.2213;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:95.06:0,95,2105	0/1:10,0:10:67.98:106,0,68	0/0:29,0:21:42.10:0,42,983	0/0:29,0:19:35.52:0,36,781	0/0:25,0:25:69.24:0,69,1517	0/1:21,0:21:99:243,0,127	1/1:17,0:17:27.08:419,27,0	0/1:51,0:51:69.10:1492,0,69	0/1:22,0:22:27.97:505,0,28	0/1:26,0:26:72.95:590,0,73	0/1:20,0:20:79.97:208,0,80	0/1:31,0:31:99:565,0,120	0/0:15,0:15:45.15:0,45,1036	0/0:16,0:16:45.15:0,45,1017	0/1:24,1:25:99:362,0,101	0/1:23,0:23:99:292,0,129	0/1:8,12:20:21.14:21,0,54	1/1:12,0:12:19.54:410,20,0	0/1:9,15:24:5.63:595,0,6	0/1:20,0:20:40.91:404,0,41	1/1:16,0:18:12.02:167,12,0	0/0:8,7:15:6.63:0,7,74	0/1:16,0:16:47.94:210,0,48	0/1:20,0:20:1.33:268,0,1	0/1:26,0:26:99:433,0,109	0/1:23,0:23:52.50:600,0,53	0/1:27,0:25:99:393,0,111	0/1:15,0:15:23.09:314,0,23
chr10	56896163	.	C	CTA	4359.17	PASS	AB=0.838;AC=39;AF=0.696;AN=56;BaseQRankSum=13.230;DP=626;FS=6.110;HRun=0;HaplotypeScore=195.1239;InbreedingCoeff=0.5031;MQ=63.22;MQ0=4;MQRankSum=-5.276;QD=9.24;ReadPosRankSum=-0.114;VQSLOD=3.6174;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,114,1719	0/1:7,3:10:0.46:109,0,0	0/0:27,0:19:53.85:0,54,813	0/0:28,0:18:46.04:0,46,714	0/0:24,0:24:72.23:0,72,1141	1/1:14,9:23:28.66:282,29,0	1/1:16,0:16:5.29:30,5,0	1/1:51,0:51:0.11:255,0,0	1/1:18,4:22:18.40:169,18,0	1/1:20,6:27:17.17:360,17,0	1/1:11,8:19:29.27:276,29,0	1/1:20,11:31:42.34:399,42,0	0/0:18,0:18:45.15:0,45,732	0/0:15,0:15:45.15:0,45,725	1/1:18,7:25:19.15:214,19,0	1/1:15,7:22:29.88:242,30,0	1/1:13,5:18:0.96:107,1,0	0/1:12,1:12:13.19:75,0,13	0/1:18,4:22:17.63:194,0,18	1/1:14,5:19:8.91:188,9,0	1/1:14,0:14:5.22:44,5,0	1/1:9,5:14:18.04:184,18,0	1/1:11,5:16:11.89:169,12,0	1/1:19,2:21:12.96:101,13,0	1/1:16,9:25:40.03:351,40,0	1/1:18,4:22:15.62:263,16,0	0/1:22,6:26:9.99:276,0,10	0/1:11,3:14:43.20:70,0,43
chr10	56896165	.	C	CTATCTA	15668.53	PASS	AB=0.864;AC=43;AF=0.768;AN=56;BaseQRankSum=14.210;DP=714;FS=18.028;HRun=0;HaplotypeScore=259.0305;InbreedingCoeff=0.8402;MQ=58.96;MQ0=5;MQRankSum=-6.273;QD=27.98;ReadPosRankSum=1.107;VQSLOD=3.2929;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:41:99:0,114,2185	1/1:10,3:13:9.47:514,9,0	0/0:28,0:20:56.22:0,56,827	0/0:27,0:17:47.65:0,48,672	0/0:24,0:24:72.23:0,72,1454	1/1:17,8:26:55.73:1083,56,0	1/1:17,0:17:13.89:108,14,0	1/1:56,0:56:68.04:981,68,0	1/1:21,4:25:35.92:623,36,0	1/1:21,6:27:37.06:902,37,0	1/1:13,7:21:37.32:787,37,0	1/1:25,11:36:55.37:1037,55,0	0/0:18,0:18:54.15:0,54,1040	0/0:16,0:16:42.14:0,42,887	1/1:21,6:28:42.59:809,43,0	1/1:19,7:26:47.80:832,48,0	1/1:17,5:22:13.68:533,14,0	1/1:18,1:18:6.37:689,6,0	1/1:24,0:28:12.76:895,13,0	1/1:24,0:29:37.22:942,37,0	1/1:16,0:16:6.24:90,6,0	1/1:14,5:19:21.07:561,21,0	1/1:14,5:19:20.07:447,20,0	1/1:22,2:24:17.17:268,17,0	1/1:22,8:31:64.50:1242,64,0	1/1:21,4:25:43.56:967,44,0	1/1:28,0:32:21.23:1123,21,0	0/1:16,3:18:21.21:235,0,21
chr10	56896582	.	G	GT	8331.80	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=17.687;DP=702;FS=1.743;HRun=2;HaplotypeScore=88.8698;InbreedingCoeff=0.9999;MQ=85.19;MQ0=2;MQRankSum=-2.694;QD=35.91;ReadPosRankSum=2.279;VQSLOD=5.3860;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,147,1760	0/0:12,0:12:33.10:0,33,409	0/0:35,0:32:77.26:0,77,867	0/0:44,0:36:82.16:0,82,961	0/0:18,0:18:45.11:0,45,541	0/0:19,0:19:57.18:0,57,706	0/0:34,0:34:99:0,99,1189	0/0:31,0:31:90.27:0,90,1105	1/1:2,14:16:42.14:586,42,0	1/1:2,16:18:48.61:623,49,0	1/1:1,16:17:42.01:564,42,0	0/0:25,0:25:74.99:0,75,878	0/0:18,0:18:54.15:0,54,654	0/0:21,0:21:57.15:0,57,677	1/1:1,18:19:45.15:633,45,0	0/0:31,1:32:48.55:0,49,1024	0/0:30,0:30:84.25:0,84,1028	0/0:22,0:22:63.20:0,63,781	1/1:2,21:23:66.19:875,66,0	1/1:2,15:17:45.62:630,46,0	1/1:1,29:31:66.22:919,66,0	0/0:31,0:31:87.26:0,87,1063	0/0:15,0:15:39.12:0,39,483	0/0:33,0:33:87.27:0,87,1077	1/1:0,19:19:45.15:630,45,0	1/1:1,19:20:57.66:799,58,0	1/1:2,35:36:99:1440,105,0	1/1:0,15:15:45.15:633,45,0
chr10	56897290	.	CTTT	C	810.36	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.490;DP=601;FS=0.887;HRun=4;HaplotypeScore=83.1976;InbreedingCoeff=0.9954;MQ=86.66;MQ0=0;MQRankSum=-3.547;QD=40.52;ReadPosRankSum=-1.140;VQSLOD=2.1269;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:81.25:0,81,1823	1/1:0,8:8:21.07:370,21,0	0/0:20,0:20:60.21:0,60,1390	0/0:23,0:23:66.22:0,66,1483	0/0:15,0:15:45.15:0,45,1064	0/0:14,0:14:42.14:0,42,976	0/0:26,0:26:75.23:0,75,1725	1/1:1,11:12:33.11:560,33,0	0/0:16,0:16:48.16:0,48,1104	0/0:23,0:23:66.23:0,66,1545	0/0:17,0:17:51.18:0,51,1206	0/0:15,0:15:45.15:0,45,1024	0/0:16,0:16:48.16:0,48,1118	0/0:17,0:17:48.15:0,48,1089	0/0:28,0:28:84.29:0,84,1987	0/0:30,0:30:87.30:0,87,2059	0/0:46,0:46:99:0,138,3119	0/0:38,0:38:99:0,114,2599	0/0:16,0:16:42.14:0,42,994	0/0:20,0:20:60.21:0,60,1410	0/0:39,0:39:99:0,114,2677	0/0:11,0:11:33.11:0,33,779	0/0:12,0:12:36.12:0,36,852	0/0:36,0:36:99:0,105,2433	0/0:19,0:19:57.20:0,57,1347	0/0:21,0:21:63.22:0,63,1491	0/0:28,0:28:84.29:0,84,1965	0/0:7,0:7:21.07:0,21,498
chr10	56897832	.	TTGTGTGTGTG	T	4448.30	PASS	AB=0.863;AC=40;AF=0.800;AN=50;BaseQRankSum=5.336;DP=516;FS=5.519;HRun=0;HaplotypeScore=148.8370;InbreedingCoeff=0.5621;MQ=66.22;MQ0=13;MQRankSum=-3.809;QD=12.64;ReadPosRankSum=0.948;VQSLOD=3.2107;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:36:39.13:0,39,1642	1/1:6,4:10:12.04:355,12,0	./.	./.	0/0:17,0:24:14.89:0,15,624	1/1:12,6:18:12.04:355,12,0	1/1:12,7:19:12.04:355,12,0	1/1:23,0:23:5.28:67,5,0	1/1:7,5:11:9.03:266,9,0	1/1:17,7:24:21.02:427,21,0	1/1:17,7:23:6.40:41,6,0	1/1:8,6:14:8.59:265,9,0	0/0:13,0:16:24.05:0,24,761	0/0:10,0:10:9.03:0,9,445	1/1:9,7:16:6.02:178,6,0	1/1:15,7:22:12.04:355,12,0	0/1:25,3:28:6.98:250,0,7	1/1:6,0:8:3.01:70,3,0	1/1:12,4:16:6.02:150,6,0	1/1:10,6:17:11.92:130,12,0	./.	1/1:6,2:7:5.99:110,6,0	0/1:11,3:14:0:0,0,0	1/1:12,3:15:6.02:178,6,0	1/1:7,1:9:9.02:184,9,0	1/1:14,0:18:5.80:92,6,0	1/1:12,4:17:2.44:88,2,0	1/1:11,7:18:18.06:533,18,0
chr10	56898215	.	GTGCTCCCTCACCCCTAGGCCCCGCCC	G	1781.01	PASS	AB=0.974;AC=11;AF=0.196;AN=56;BaseQRankSum=7.434;DP=524;FS=0.000;HRun=0;HaplotypeScore=325.0525;InbreedingCoeff=-0.2448;MQ=56.92;MQ0=8;MQRankSum=-6.115;QD=8.99;ReadPosRankSum=3.554;VQSLOD=1.3025;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:66.10:0,66,2039	0/1:4,0:4:67.78:68,0,126	0/0:25,0:15:27.59:0,28,483	0/0:25,0:19:40.42:0,40,931	0/0:13,0:13:27.03:0,27,747	0/0:12,0:12:36.09:0,36,1294	0/0:21,0:21:54.14:0,54,1991	0/0:23,0:21:36.33:0,36,484	0/1:15,0:12:99:195,0,338	0/1:12,8:20:99:264,0,240	0/1:17,0:17:34.25:34,0,368	0/0:26,0:26:69.12:0,69,2537	0/0:15,0:15:45.12:0,45,1896	0/0:23,0:23:63.20:0,63,2708	0/1:16,0:16:99:123,0,439	0/0:14,0:14:39.13:0,39,1908	0/0:32,0:32:84.24:0,84,3782	0/0:17,0:17:42.13:0,42,1894	0/1:18,0:15:99:291,0,387	0/0:11,0:11:22.81:0,23,465	0/1:61,0:53:99:105,0,1638	0/0:10,0:10:27.02:0,27,989	0/0:12,0:12:27.03:0,27,712	0/0:20,0:20:51.16:0,51,2289	0/1:11,0:11:99:260,0,170	0/1:16,0:15:99:116,0,391	0/1:14,0:14:99:223,0,424	0/1:6,0:6:85.35:250,0,85
chr10	56898238	.	GCC	G	945.56	PASS	AB=0.743;AC=11;AF=0.196;AN=56;BaseQRankSum=8.435;DP=445;FS=3.362;HRun=4;HaplotypeScore=91.3673;InbreedingCoeff=-0.2341;MQ=65.19;MQ0=0;MQRankSum=-5.175;QD=5.91;ReadPosRankSum=0.297;VQSLOD=-0.2323;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:66.22:0,66,1246	0/1:3,1:4:36.80:37,0,95	0/0:10,0:7:21.06:0,21,372	0/0:20,0:16:28.54:0,29,764	0/0:8,0:8:24.07:0,24,420	0/0:16,0:16:48.15:0,48,858	0/0:24,0:24:72.24:0,72,1356	0/0:9,0:8:21.07:0,21,373	0/1:11,6:14:95.36:95,0,583	0/1:15,0:15:99:242,0,246	0/1:7,6:13:70.57:71,0,258	0/0:22,0:22:66.23:0,66,1222	0/0:14,0:14:39.13:0,39,740	0/0:25,0:25:69.22:0,69,1288	0/1:7,4:11:64.56:65,0,379	0/0:15,0:15:45.15:0,45,838	0/0:33,0:33:99:0,99,1899	0/0:15,0:15:45.15:0,45,834	0/1:11,4:14:99:147,0,415	0/0:5,3:8:15.05:0,15,290	0/1:47,9:51:0.98:1,0,1442	0/0:10,0:10:30.05:0,30,509	0/0:6,0:6:18.06:0,18,334	0/0:23,0:23:66.20:0,66,1207	0/1:1,4:5:45.91:125,0,46	0/1:5,3:7:73.70:74,0,214	0/1:7,5:12:99:107,0,371	0/1:1,3:4:45.88:126,0,46
chr10	56899349	.	C	CGT	2548.71	PASS	AB=0.896;AC=27;AF=0.540;AN=50;BaseQRankSum=1.555;DP=579;FS=3.633;HRun=0;HaplotypeScore=76.7469;InbreedingCoeff=-0.2323;MQ=56.16;MQ0=22;MQRankSum=-0.806;QD=5.93;ReadPosRankSum=2.089;VQSLOD=2.4537;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:47:32.99:0,33,529	1/1:6,0:6:3.01:34,3,0	./.	./.	0/1:17,0:17:10:10,0,44	0/1:10,8:19:62.13:111,0,62	0/1:22,11:34:68.24:68,0,123	./.	0/1:26,0:24:4.21:265,0,4	1/1:20,0:20:8.23:67,8,0	0/1:10,0:12:19.31:65,0,19	1/1:12,8:19:9.02:135,9,0	0/0:21,0:24:33.93:0,34,318	0/0:23,0:23:40.89:0,41,421	1/1:15,0:15:3.01:33,3,0	0/1:22,1:21:21.51:139,0,22	1/1:18,5:22:30.08:422,30,0	0/1:5,11:16:34.27:162,0,34	0/0:25,0:25:4.76:0,5,89	0/1:17,0:16:75.55:126,0,76	0/1:37,0:32:23.56:70,0,24	0/1:11,7:17:26.93:39,0,27	0/1:9,6:14:14.54:81,0,15	0/1:46,0:43:0.69:421,0,1	0/1:17,0:16:14.93:146,0,15	0/1:23,0:22:12.71:136,0,13	0/1:14,0:13:28.32:48,0,28	1/1:11,0:11:9.03:125,9,0
chr10	56899351	.	T	TGC	3224.61	PASS	AB=0.861;AC=29;AF=0.518;AN=56;BaseQRankSum=-2.565;DP=602;FS=0.887;HRun=0;HaplotypeScore=76.6930;InbreedingCoeff=0.1088;MQ=56.05;MQ0=23;MQRankSum=0.324;QD=7.81;ReadPosRankSum=4.682;VQSLOD=2.7107;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:49:99:0,120,1284	1/1:0,6:6:3.01:52,3,0	0/0:12,0:7:20.97:0,21,193	0/0:9,0:4:12.02:0,12,127	0/0:17,0:17:34.78:0,35,304	0/1:19,0:19:27.29:27,0,216	0/0:34,0:34:4.21:0,4,417	1/1:7,0:5:8.52:42,9,0	0/1:8,18:26:3.07:368,0,3	1/1:4,16:20:44.52:395,45,0	1/1:12,0:12:8.16:153,8,0	0/1:19,0:18:28.57:29,0,143	0/0:24,0:24:65.84:0,66,703	0/0:24,0:24:65.95:0,66,762	1/1:2,13:17:3.01:58,3,0	0/1:24,0:22:2.50:2,0,346	0/1:22,0:21:99:130,0,204	0/1:17,0:17:50.46:50,0,151	0/1:28,0:27:22.58:150,0,23	0/1:8,9:16:99:174,0,104	0/1:13,25:34:22.30:116,0,22	0/0:19,0:17:3.88:0,4,173	0/1:16,0:15:16.25:16,0,140	1/1:11,37:47:4.53:706,5,0	1/1:2,16:20:4.70:276,5,0	1/1:8,14:21:15.38:361,15,0	0/1:7,9:16:24.51:136,0,25	1/1:0,11:11:9.03:160,9,0
chr10	56903066	.	CTGGTGG	C	990.89	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.397;DP=710;FS=6.375;HRun=0;HaplotypeScore=143.9612;InbreedingCoeff=0.9832;MQ=69.56;MQ0=1;MQRankSum=-4.864;QD=25.41;ReadPosRankSum=-2.360;VQSLOD=2.7331;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:56:99:0,135,4267	1/1:0,6:6:15.05:323,15,0	0/0:21,0:19:39.13:0,39,1091	0/0:24,0:24:54.05:0,54,1644	0/0:23,0:23:36.09:0,36,1007	0/0:18,0:18:48.16:0,48,1564	0/0:20,0:20:48.15:0,48,1474	1/1:20,13:33:39.12:786,39,0	0/0:37,0:37:99:0,99,3248	0/0:29,0:29:72.25:0,72,2367	0/0:18,0:18:39.13:0,39,1283	0/0:28,0:28:63.22:0,63,2106	0/0:15,0:15:42.14:0,42,1393	0/0:30,0:30:72.25:0,72,2414	0/0:32,0:32:87.30:0,87,2824	0/0:26,0:26:60.21:0,60,2014	0/0:35,0:35:93.32:0,93,3064	0/0:23,0:23:60.21:0,60,1953	0/0:19,0:19:36.11:0,36,1059	0/0:27,0:27:45.15:0,45,1434	0/0:40,0:40:90.29:0,90,2863	0/0:22,0:22:39.12:0,39,1143	0/0:15,0:15:33.11:0,33,1101	0/0:37,0:37:93.32:0,93,2984	0/0:18,0:18:36.12:0,36,1183	0/0:22,0:22:51.18:0,51,1660	0/0:29,0:29:75.26:0,75,2346	0/0:6,0:6:15.05:0,15,501
chr10	56904286	.	AAAC	A	899.37	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.238;DP=594;FS=0.000;HRun=0;HaplotypeScore=95.6205;InbreedingCoeff=0.9939;MQ=66.17;MQ0=0;MQRankSum=-0.355;QD=23.06;ReadPosRankSum=-2.391;VQSLOD=3.1015;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:81.24:0,81,1517	1/1:6,5:11:18.03:209,18,0	0/0:23,0:22:46.96:0,47,604	0/0:9,0:9:22.56:0,23,255	0/0:18,0:18:42.07:0,42,670	0/0:23,0:23:63.15:0,63,1097	0/0:16,0:16:36.09:0,36,605	1/1:7,21:28:68.14:810,68,0	0/0:17,0:17:44.97:0,45,741	0/0:27,0:27:78.24:0,78,1342	0/0:16,0:16:42.01:0,42,659	0/0:14,0:14:39.12:0,39,686	0/0:13,0:13:39.11:0,39,714	0/0:21,0:21:57.18:0,57,1050	0/0:17,0:17:36.11:0,36,690	0/0:15,0:15:42.14:0,42,794	0/0:37,0:37:99:0,99,1877	0/0:35,0:35:84.22:0,84,1519	0/0:15,0:15:39.10:0,39,713	0/0:30,0:30:69:0,69,1148	0/0:19,0:19:54.16:0,54,986	0/0:12,0:12:33.10:0,33,597	0/0:19,0:19:51.11:0,51,829	0/0:18,0:18:51.14:0,51,940	0/0:32,0:32:87.27:0,87,1627	0/0:22,0:22:57.14:0,57,940	0/0:23,0:23:60.17:0,60,1104	0/0:34,0:34:93.19:0,93,1563
chr10	56904368	.	TA	T	7255.40	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=14.405;DP=634;FS=3.085;HRun=8;HaplotypeScore=65.0832;InbreedingCoeff=0.9974;MQ=73.52;MQ0=0;MQRankSum=-0.757;QD=23.87;ReadPosRankSum=0.637;VQSLOD=5.6979;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:33:96.29:0,96,1159	1/1:4,6:10:15.02:145,15,0	0/0:24,0:22:28.40:0,28,483	0/0:14,0:14:25.32:0,25,283	0/0:32,0:32:96.29:0,96,1158	0/0:30,0:30:90.28:0,90,1086	0/0:12,0:12:33.10:0,33,398	1/1:4,17:21:53.96:498,54,0	1/1:1,21:22:60.09:579,60,0	1/1:2,30:32:90.14:868,90,0	1/1:3,17:20:48.05:459,48,0	0/0:17,0:17:51.16:0,51,615	0/0:15,0:15:42.09:0,42,475	0/0:22,0:22:57.17:0,57,688	1/1:1,25:26:69.11:666,69,0	0/0:21,0:21:57.16:0,57,678	0/0:26,0:27:81.11:0,81,957	0/0:22,0:22:60.14:0,60,708	1/1:5,18:23:54.05:514,54,0	1/1:1,22:23:63.10:607,63,0	1/1:3,19:22:54.08:522,54,0	0/0:19,0:19:57.17:0,57,688	0/0:26,0:26:72.20:0,72,845	0/0:15,0:15:42.13:0,42,507	1/1:5,26:31:72.11:695,72,0	1/1:3,22:25:63.10:608,63,0	1/1:0,28:28:75.12:724,75,0	1/1:6,15:21:39.02:369,39,0
chr10	56905490	.	TG	T	4254.86	PASS	AB=0.926;AC=45;AF=0.833;AN=54;BaseQRankSum=-2.954;DP=324;FS=7.390;HRun=10;HaplotypeScore=47.6882;InbreedingCoeff=0.3964;MQ=87.37;MQ0=0;MQRankSum=-2.284;QD=15.03;ReadPosRankSum=6.806;VQSLOD=4.4121;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:16,1:17:14.94:15,0,140	./.	0/0:13,0:14:19.11:0,19,170	0/0:17,0:17:3.59:0,4,201	0/1:3,0:3:15.89:16,0,27	1/1:3,10:13:17.95:156,18,0	1/1:2,19:21:50.74:442,51,0	0/0:9,1:10:6.01:0,6,59	1/1:7,6:15:27.99:219,28,0	1/1:4,6:11:20.02:160,20,0	1/1:2,6:9:19.71:162,20,0	1/1:1,7:8:17.99:156,18,0	1/1:1,2:3:3:26,3,0	0/1:8,2:10:26.29:26,0,145	1/1:5,5:10:23.97:204,24,0	1/1:2,6:8:14.99:130,15,0	1/1:8,25:33:74.95:645,75,0	1/1:5,14:20:11.53:266,12,0	1/1:3,8:11:26.99:234,27,0	1/1:1,2:3:2.73:26,3,0	1/1:5,15:20:3.68:245,4,0	1/1:4,10:14:29.22:259,29,0	1/1:2,3:6:7.54:57,8,0	1/1:5,10:16:32:266,32,0	1/1:1,7:8:14.88:130,15,0	1/1:4,8:12:23.99:208,24,0	1/1:1,5:6:15:130,15,0	1/1:1,5:6:9:78,9,0
chr10	56905563	.	T	TG	1373.93	PASS	AB=0.800;AC=22;AF=0.407;AN=54;BaseQRankSum=-2.022;DP=325;FS=21.090;HRun=9;HaplotypeScore=52.2984;InbreedingCoeff=0.7541;MQ=86.12;MQ0=0;MQRankSum=-1.995;QD=12.84;ReadPosRankSum=-0.303;VQSLOD=1.3109;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:23:56.01:0,56,475	./.	0/0:17,0:15:4.58:0,5,156	0/0:18,0:19:28.43:0,28,211	0/0:12,0:12:23.97:0,24,208	0/0:16,0:16:29.99:0,30,260	0/0:19,0:19:44.98:0,45,391	1/1:7,1:13:17.33:110,17,0	1/1:5,2:8:11.82:93,12,0	1/1:3,6:9:18.52:200,19,0	1/1:3,3:6:6.49:67,6,0	0/0:8,0:8:21:0,21,182	0/0:7,0:7:21:0,21,182	0/0:7,0:7:14.99:0,15,130	1/1:1,10:11:15.03:158,15,0	0/0:12,0:13:29.03:0,29,240	0/0:25,0:25:59.93:0,60,515	0/0:12,0:12:29.98:0,30,260	0/1:6,2:8:14.03:87,0,14	1/1:1,4:5:12.03:133,12,0	1/1:3,9:12:21.06:232,21,0	0/0:7,0:7:15:0,15,130	0/0:12,0:12:20.99:0,21,182	0/0:19,0:19:47.94:0,48,407	0/1:6,2:8:20.03:27,0,20	1/1:3,3:7:9.02:99,9,0	1/1:2,10:12:4.02:270,4,0	1/1:4,4:8:9.02:100,9,0
chr10	56906032	.	G	GA	336.15	PASS	AB=0.950;AC=6;AF=0.107;AN=56;BaseQRankSum=-4.728;DP=338;FS=7.137;HRun=10;HaplotypeScore=37.2149;InbreedingCoeff=0.5389;MQ=54.30;MQ0=8;MQRankSum=0.471;QD=9.60;ReadPosRankSum=-2.947;VQSLOD=0.6620;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:35:75.72:0,76,609	1/1:0,4:3:9.02:96,9,0	0/0:1,0:1:3:0,3,25	0/0:7,0:4:11.98:0,12,98	0/0:14,0:14:23.92:0,24,194	0/0:12,0:12:29.94:0,30,243	0/0:22,0:21:56.92:0,57,468	1/1:3,15:12:35.89:348,36,0	0/0:4,0:4:11.93:0,12,90	0/0:9,0:9:20.95:0,21,168	0/0:11,0:10:23.96:0,24,197	0/0:6,0:6:11.97:0,12,98	0/0:4,0:4:5.78:0,6,49	0/0:6,0:6:8.98:0,9,74	0/0:10,0:10:14.95:0,15,123	0/0:7,0:7:8.99:0,9,74	0/0:47,0:46:99:0,114,919	0/0:18,0:16:44.91:0,45,364	0/0:13,0:12:26.90:0,27,212	0/1:8,1:9:11.03:11,0,125	0/0:11,0:11:26.92:0,27,216	0/0:6,0:6:2.98:0,3,25	0/0:4,0:4:5.97:0,6,49	0/0:23,0:22:56.92:0,57,467	0/0:12,0:12:29.92:0,30,240	0/0:8,0:7:11.98:0,12,98	0/0:11,0:11:26.96:0,27,220	0/1:3,0:1:0:0,0,0
chr10	56906869	.	A	AT	6194.51	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=-12.240;DP=547;FS=5.356;HRun=8;HaplotypeScore=49.8921;InbreedingCoeff=0.9244;MQ=70.14;MQ0=0;MQRankSum=1.168;QD=26.25;ReadPosRankSum=0.556;VQSLOD=5.5307;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:65.99:0,66,589	0/0:11,0:11:30.01:0,30,274	0/0:9,0:9:5.95:0,6,47	0/1:7,0:7:4.44:12,0,4	0/0:35,0:35:99:0,102,908	0/0:29,0:29:72.01:0,72,652	0/0:23,0:23:63.02:0,63,571	0/0:28,0:28:73.55:0,74,652	1/1:0,13:13:33.10:381,33,0	1/1:6,17:23:50.86:544,51,0	1/1:2,25:27:50.69:808,51,0	0/0:16,0:16:36:0,36,324	0/0:10,0:10:27:0,27,243	0/0:8,0:8:24.01:0,24,219	1/1:2,19:21:51.04:590,51,0	0/0:22,0:22:65.99:0,66,589	0/0:20,0:20:57:0,57,511	0/0:21,0:21:57.02:0,57,518	1/1:3,21:24:63.17:712,63,0	1/1:1,27:28:78.19:884,78,0	1/1:2,13:15:30.09:347,30,0	0/0:14,0:14:42.01:0,42,379	0/0:20,0:20:56.99:0,57,511	0/0:19,0:19:41.54:0,42,404	1/1:3,16:19:36.11:416,36,0	1/1:3,30:32:83.31:911,83,0	1/1:5,15:20:42.12:486,42,0	1/1:1,5:6:9.03:104,9,0
chr10	56907138	.	T	TG	1567.22	PASS	AB=0.758;AC=33;AF=0.589;AN=56;BaseQRankSum=-2.920;DP=427;FS=29.500;HRun=10;HaplotypeScore=80.0401;InbreedingCoeff=0.2906;MQ=67.69;MQ0=1;MQRankSum=-2.169;QD=5.06;ReadPosRankSum=-1.908;VQSLOD=-0.4491;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:22:43.94:0,44,345	0/0:1,0:8:10.17:0,10,29	0/0:9,0:9:2.53:0,3,45	0/0:9,0:8:4.79:0,5,40	0/0:13,0:13:17.96:0,18,148	0/1:12,2:14:20.03:20,0,62	1/1:9,12:21:5.43:263,5,0	0/0:10,0:22:19.19:0,19,55	0/1:12,0:12:2.97:13,0,3	1/1:8,2:10:4.25:35,4,0	1/1:5,1:7:3.01:32,3,0	0/1:10,9:19:15.65:46,0,16	0/0:16,0:16:20.95:0,21,172	0/0:18,0:18:29.93:0,30,246	1/1:11,0:10:8.67:60,9,0	0/1:7,7:14:9.65:101,0,10	1/1:12,15:28:14.19:186,14,0	0/1:14,9:23:9.61:113,0,10	1/1:9,1:15:17.67:135,18,0	1/1:3,0:3:3:28,3,0	1/1:30,2:39:2.94:15,3,0	0/1:5,3:8:36.86:52,0,37	1/1:2,3:5:9.02:96,9,0	0/1:16,21:37:25.77:368,0,26	1/1:14,0:14:5.94:44,6,0	1/1:13,0:14:2.88:15,3,0	1/1:6,1:8:5.85:46,6,0	1/1:4,2:7:8.89:79,9,0
chr10	56908013	.	GA	G	979.40	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.063;DP=720;FS=0.000;HRun=1;HaplotypeScore=83.4359;InbreedingCoeff=0.9958;MQ=58.96;MQ0=3;MQRankSum=-6.274;QD=29.68;ReadPosRankSum=-1.581;VQSLOD=2.9374;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,135,2110	1/1:0,9:8:21.07:270,21,0	0/0:27,0:18:54.18:0,54,842	0/0:26,0:24:59.35:0,59,965	0/0:28,0:28:84.29:0,84,1339	0/0:20,0:20:60.20:0,60,959	0/0:32,0:32:93.32:0,93,1477	1/1:3,21:23:66.20:830,66,0	0/0:14,0:14:42.14:0,42,661	0/0:37,0:37:99:0,108,1680	0/0:19,0:19:57.19:0,57,910	0/0:24,0:24:72.25:0,72,1151	0/0:28,0:28:81.26:0,81,1264	0/0:23,0:23:66.22:0,66,1050	0/0:18,0:18:54.18:0,54,863	0/0:36,0:36:99:0,108,1717	0/0:35,0:35:99:0,105,1669	0/0:28,0:28:81.19:0,81,1188	0/0:23,0:20:57.19:0,57,903	0/0:24,0:24:66.23:0,66,1054	0/0:35,0:35:99:0,105,1618	0/0:30,0:30:87.30:0,87,1383	0/0:16,0:16:48.15:0,48,740	0/0:35,0:35:99:0,102,1611	0/0:22,0:22:66.22:0,66,1045	0/0:28,0:28:84.29:0,84,1343	0/0:27,0:26:81.26:0,81,1262	0/0:7,0:7:21.07:0,21,336
chr10	56908113	.	TCTC	T	1171.61	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.053;DP=691;FS=6.257;HRun=0;HaplotypeScore=94.7193;InbreedingCoeff=0.9880;MQ=70.93;MQ0=0;MQRankSum=-2.070;QD=39.05;ReadPosRankSum=2.245;VQSLOD=4.9033;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,114,2406	0/0:8,0:8:18.06:0,18,389	0/0:11,0:11:24.08:0,24,514	0/0:13,0:13:27.03:0,27,481	0/0:33,0:33:84.29:0,84,1817	0/0:24,0:24:69.24:0,69,1486	0/0:27,0:27:75.24:0,75,1582	0/0:33,0:33:87.29:0,87,1833	0/0:26,0:26:78.25:0,78,1647	0/0:20,0:20:57.19:0,57,1178	0/0:23,0:23:69.22:0,69,1420	1/1:0,30:30:81.28:1266,81,0	0/0:28,0:28:84.29:0,84,1778	0/0:27,0:27:72.23:0,72,1517	0/0:35,0:35:93.28:0,93,1894	0/0:33,0:33:93.28:0,93,1952	0/0:24,0:24:69.20:0,69,1409	0/0:22,0:22:57.20:0,57,1228	0/0:20,0:20:45.15:0,45,936	0/0:36,0:36:99:0,99,2060	0/0:17,0:17:39.12:0,39,803	0/0:26,0:26:72.25:0,72,1531	0/0:25,0:25:72.23:0,72,1453	0/0:25,0:25:72.23:0,72,1518	0/0:22,0:22:60.21:0,60,1291	0/0:26,0:26:72.24:0,72,1519	0/0:27,0:27:78.27:0,78,1640	0/0:9,0:9:27.09:0,27,584
chr10	56908318	.	AAACAACAAC	A	9658.50	PASS	AB=0.969;AC=30;AF=0.556;AN=54;BaseQRankSum=9.933;DP=684;FS=0.422;HRun=0;HaplotypeScore=226.3935;InbreedingCoeff=0.0467;MQ=59.99;MQ0=5;MQRankSum=-11.230;QD=18.94;ReadPosRankSum=-3.270;VQSLOD=3.4398;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:35:53.47:0,53,2191	1/1:5,0:12:6.01:126,6,0	0/0:13,0:9:3:0,3,27	./.	0/0:41,0:41:94.20:0,94,3863	1/1:8,16:24:12.04:311,12,0	0/1:12,20:33:21.34:317,0,21	0/0:29,0:28:24.08:0,24,258	0/1:30,0:30:99:605,0,174	0/1:31,0:31:99:605,0,203	0/1:21,0:21:99:352,0,150	1/1:9,12:21:17.62:471,18,0	0/0:21,0:21:39.13:0,39,1375	0/0:20,0:20:27.09:0,27,1128	0/1:17,0:17:74.61:375,0,75	1/1:16,17:32:32.17:912,32,0	1/1:9,14:23:18.06:430,18,0	1/1:9,10:19:9.03:249,9,0	0/1:20,0:18:90.53:234,0,91	0/1:32,0:32:99:711,0,133	0/1:14,0:14:10.34:10,0,102	1/1:13,16:29:39.05:856,39,0	1/1:8,22:30:27.09:684,27,0	1/1:14,13:27:5.33:164,5,0	0/1:15,0:15:7.66:315,0,8	0/1:33,0:33:99:808,0,130	0/1:29,0:29:99:664,0,227	0/1:16,0:16:99:459,0,122
chr10	56908341	.	AC	A	6169.67	PASS	AB=0.622;AC=14;AF=0.250;AN=56;BaseQRankSum=11.687;DP=663;FS=4.000;HRun=1;HaplotypeScore=157.5719;InbreedingCoeff=-0.1722;MQ=52.44;MQ0=7;MQRankSum=-11.945;QD=21.06;ReadPosRankSum=9.701;VQSLOD=4.3426;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:32:91.84:0,92,1400	1/1:9,0:8:7.45:56,7,0	0/0:14,0:8:23.94:0,24,292	0/0:20,0:10:23.39:0,23,328	0/0:44,0:44:99:0,129,1939	0/0:24,0:24:20.99:0,21,303	0/0:27,0:27:17.66:0,18,294	0/1:24,9:33:99:405,0,665	0/1:8,17:25:99:636,0,132	0/1:13,20:33:99:686,0,288	0/1:14,13:27:99:472,0,402	0/0:19,0:19:13.70:0,14,189	0/0:22,0:22:63.21:0,63,953	0/0:17,0:17:51.17:0,51,772	0/1:6,13:19:99:436,0,153	0/0:25,0:24:14.47:0,14,271	0/0:20,0:19:14.61:0,15,209	0/0:21,0:21:21.46:0,21,308	0/1:3,12:15:45.18:402,0,45	0/1:4,21:25:84.13:685,0,84	0/1:7,5:11:78.74:182,0,79	0/0:26,0:26:50.96:0,51,655	0/0:32,0:32:33.70:0,34,396	0/0:26,0:26:19.68:0,20,285	0/1:6,8:14:99:269,0,136	0/1:6,21:28:61.07:802,0,61	0/1:9,20:29:99:721,0,211	0/1:9,13:22:99:418,0,312
chr10	56908345	.	CAACAACAACAA	C	12030.74	PASS	AB=0.979;AC=30;AF=0.536;AN=56;BaseQRankSum=16.688;DP=678;FS=7.210;HRun=0;HaplotypeScore=257.8684;InbreedingCoeff=0.1282;MQ=53.67;MQ0=7;MQRankSum=-9.408;QD=24.91;ReadPosRankSum=7.894;VQSLOD=2.4811;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:33:83.75:0,84,2939	0/1:11,0:10:71.52:114,0,72	0/0:18,0:12:30.03:0,30,394	0/0:22,0:11:32.89:0,33,482	0/0:44,0:44:99:0,123,5267	0/1:24,0:24:99:113,0,221	0/1:26,0:26:78.01:78,0,225	0/0:33,0:31:37.77:0,38,523	1/1:13,11:24:49.42:1187,49,0	1/1:23,11:34:33.59:1359,34,0	0/1:20,7:27:39.94:761,0,40	0/1:18,0:19:99:116,0,217	0/0:23,0:23:60.20:0,60,1968	0/0:21,0:21:57.19:0,57,1860	1/1:15,7:22:48.57:994,49,0	0/1:24,0:24:99:260,0,134	0/1:20,0:19:80.91:81,0,196	0/1:21,0:21:44.76:45,0,392	1/1:11,4:15:2.08:393,2,0	1/1:14,14:28:48.17:1404,48,0	0/1:12,0:11:5.25:112,0,5	0/1:27,0:27:99:143,0,564	0/1:32,0:32:99:120,0,486	0/1:24,0:24:26.99:27,0,279	1/1:10,5:15:33.82:651,34,0	1/1:14,13:27:57.54:1590,58,0	1/1:17,12:29:55.79:1416,56,0	1/1:13,9:22:51.99:1068,52,0
chr10	56909308	.	C	CCAAA	21970.33	PASS	AB=0.742;AC=37;AF=0.661;AN=56;BaseQRankSum=-8.561;DP=900;FS=6.005;HRun=0;HaplotypeScore=214.3914;InbreedingCoeff=0.7938;MQ=57.42;MQ0=3;MQRankSum=0.094;QD=33.70;ReadPosRankSum=4.537;VQSLOD=4.3631;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,99,1568	0/0:10,0:10:21.07:0,21,344	0/0:17,0:12:33.11:0,33,513	0/0:25,0:23:32.95:0,33,486	0/0:60,0:54:40.43:0,40,730	1/1:5,15:18:36.12:878,36,0	1/1:16,24:42:54.18:1300,54,0	0/0:37,0:37:66.20:0,66,1009	1/1:16,19:34:63.22:1442,63,0	1/1:32,11:35:51.98:1146,52,0	0/1:18,8:25:0.33:385,0,0	1/1:11,23:35:57.20:1388,57,0	0/0:23,0:23:51.17:0,51,835	0/0:32,0:30:69.22:0,69,1103	1/1:14,15:27:36.09:823,36,0	1/1:8,25:34:14.06:1414,14,0	1/1:4,15:19:33.11:805,33,0	1/1:8,17:25:48.16:1171,48,0	1/1:20,6:25:29.62:724,30,0	1/1:15,18:32:42.99:1229,43,0	1/1:24,17:41:53.96:1132,54,0	0/1:27,14:37:78.05:768,0,78	1/1:19,9:25:10.03:584,10,0	1/1:10,43:56:62.21:2532,62,0	0/1:26,16:41:9:1131,0,9	1/1:16,21:35:51.46:1525,51,0	1/1:10,14:23:36.25:1015,36,0	1/1:3,10:13:19.82:579,20,0
chr10	56909329	.	C	CA	909.06	PASS	AB=0.994;AC=21;AF=0.375;AN=56;BaseQRankSum=12.271;DP=870;FS=1.252;HRun=3;HaplotypeScore=190.1367;InbreedingCoeff=-0.4414;MQ=57.79;MQ0=3;MQRankSum=3.085;QD=1.49;ReadPosRankSum=8.292;VQSLOD=-0.7605;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,138,1695	0/0:11,0:11:33.10:0,33,409	0/0:19,0:14:42.13:0,42,521	0/0:26,0:23:57.12:0,57,647	0/0:51,0:48:78.82:0,79,891	0/1:20,0:18:31.88:32,0,80	0/1:39,0:39:58.45:58,0,342	0/0:40,0:39:99:0,114,1390	0/1:30,0:29:29.45:29,0,185	0/1:37,2:32:96.22:185,0,96	0/1:23,0:21:27.35:27,0,153	0/1:37,0:36:47.97:48,0,136	0/0:28,0:28:72.22:0,72,892	0/0:36,0:35:93.29:0,93,1152	0/1:29,0:26:7.45:7,0,284	0/1:32,0:32:43.44:43,0,222	0/1:22,0:22:16.43:16,0,218	0/1:23,0:23:38.72:39,0,127	0/1:25,1:25:21.94:22,0,394	0/1:30,0:30:55.63:56,0,377	0/1:34,1:35:99:149,0,265	0/1:39,0:34:25.60:26,0,354	0/1:24,0:22:16.89:17,0,119	0/1:60,0:60:66.51:67,0,501	0/1:35,0:35:39.32:39,0,201	0/1:36,0:31:99:136,0,355	0/1:22,0:21:36.47:36,0,115	1/1:9,0:9:14.26:41,14,0
chr10	56909360	.	T	TACTAACCA	11514.17	PASS	AB=0.965;AC=21;AF=0.375;AN=56;BaseQRankSum=-2.631;DP=1011;FS=77.655;HRun=0;HaplotypeScore=399.9902;InbreedingCoeff=0.5871;MQ=48.07;MQ0=9;MQRankSum=-4.098;QD=26.65;ReadPosRankSum=-1.819;VQSLOD=1.9877;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:79,0:69:99:0,158,3040	1/1:8,0:8:23.65:207,24,0	0/0:20,0:9:18.88:0,19,297	0/0:25,0:17:28.29:0,28,541	0/0:24,0:23:65.92:0,66,1203	0/0:46,0:36:19.42:0,19,1014	0/0:55,0:53:99:0,102,2163	1/1:44,0:40:86.04:1324,86,0	0/1:36,2:30:92.76:970,0,93	0/1:32,1:25:70.32:415,0,70	1/1:9,0:9:26.92:377,27,0	0/0:43,0:41:74.53:0,75,1397	0/0:37,0:35:89.49:0,89,1788	0/0:51,0:48:99:0,113,2351	1/1:25,5:25:41.32:1750,41,0	0/0:36,0:35:85.65:0,86,1691	0/0:27,0:26:22.47:0,22,1350	0/0:27,0:27:51.52:0,52,1046	1/1:51,1:38:5.12:1013,5,0	1/1:22,1:24:66.05:1393,66,0	0/1:78,0:66:99:832,0,440	0/0:31,0:29:74.21:0,74,1293	0/0:10,0:10:30.10:0,30,748	0/0:68,0:65:99:0,143,2900	1/1:19,1:20:53.77:809,54,0	0/1:63,4:52:55.12:1757,0,55	0/1:25,1:21:94.74:527,0,95	1/1:3,0:3:9:139,9,0
chr10	56910099	.	TC	T	5553.08	PASS	AC=50;AF=0.926;AN=54;BaseQRankSum=-4.878;DP=302;FS=116.946;HRun=1;HaplotypeScore=30.6962;InbreedingCoeff=0.6118;MQ=49.45;MQ0=46;MQRankSum=-2.720;QD=30.02;ReadPosRankSum=1.773;VQSLOD=-0.1805;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,13:12:30.08:403,30,0	1/1:0,2:2:3.01:42,3,0	0/0:68,0:6:14.31:0,14,222	0/0:48,0:3:12.04:0,12,163	1/1:0,11:11:21.02:271,21,0	1/1:0,6:6:8.99:104,9,0	1/1:0,8:8:15.05:209,15,0	1/1:0,8:7:21.07:293,21,0	1/1:0,9:9:18.06:251,18,0	1/1:0,5:5:15.05:209,15,0	1/1:0,6:6:12:146,12,0	1/1:0,8:8:24.07:321,24,0	1/1:0,4:3:9.03:124,9,0	1/1:0,8:8:12.51:168,13,0	1/1:0,15:14:33.11:460,33,0	1/1:0,9:8:24.08:323,24,0	1/1:0,3:3:9.03:126,9,0	1/1:0,1:1:3.01:42,3,0	1/1:0,5:5:15.05:208,15,0	1/1:0,8:7:21.03:271,21,0	./.	1/1:0,18:18:45.06:579,45,0	1/1:0,6:6:12:146,12,0	1/1:0,5:5:6:84,6,0	1/1:0,8:7:12.04:167,12,0	1/1:1,10:10:24.04:313,24,0	1/1:1,6:6:18.06:251,18,0	1/1:0,1:1:3.01:42,3,0
chr10	56911372	.	T	TCAAAA	1048.03	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-0.338;DP=699;FS=2.022;HRun=0;HaplotypeScore=130.7456;InbreedingCoeff=0.9528;MQ=67.93;MQ0=3;MQRankSum=-2.824;QD=30.82;ReadPosRankSum=-2.892;VQSLOD=3.1713;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:69.21:0,69,1218	1/1:2,8:10:24.08:679,24,0	0/0:33,0:21:11.84:0,12,145	0/0:52,0:39:10.11:0,10,320	0/0:38,0:38:87.28:0,87,1565	0/0:27,0:27:54.19:0,54,990	0/0:17,0:18:25.68:0,26,596	1/1:22,1:24:21.05:489,21,0	0/0:19,0:19:27.08:0,27,465	0/0:22,0:22:39.13:0,39,715	0/0:23,0:23:39.13:0,39,715	0/0:13,0:13:21.07:0,21,385	0/0:23,0:23:51.16:0,51,905	0/0:27,0:27:33.11:0,33,605	0/0:26,0:26:42.14:0,42,770	0/0:15,0:15:30.09:0,30,520	0/0:30,0:30:66.21:0,66,1180	0/0:25,0:25:51.17:0,51,928	0/0:15,0:15:27.07:0,27,495	0/0:28,0:28:60.18:0,60,1040	0/0:16,0:16:27.09:0,27,495	0/0:21,0:21:33.10:0,33,576	0/0:29,0:29:45.14:0,45,795	0/0:25,0:25:32.24:0,32,705	0/0:22,0:22:51.17:0,51,935	0/0:34,0:34:69.23:0,69,1224	0/0:34,0:34:78.25:0,78,1340	0/0:13,0:13:33.11:0,33,605
chr10	56912841	.	CTGCTTCTCTT	C	6167.67	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=5.200;DP=494;FS=28.707;HRun=0;HaplotypeScore=186.7311;InbreedingCoeff=0.8770;MQ=78.36;MQ0=4;MQRankSum=-6.845;QD=52.72;ReadPosRankSum=1.672;VQSLOD=2.8830;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:71.87:0,72,2329	1/1:1,1:2:3.01:85,3,0	0/0:51,0:31:47.34:0,47,1241	0/0:86,0:50:45.21:0,45,870	0/0:10,0:10:30.10:0,30,1255	0/0:16,0:16:42.14:0,42,1582	0/0:28,0:28:81.27:0,81,3122	1/1:5,14:19:42.12:953,42,0	1/1:0,12:12:15.05:455,15,0	1/1:1,5:6:18.06:541,18,0	1/1:1,9:10:9.03:285,9,0	0/0:21,0:21:51.12:0,51,1893	0/0:18,0:18:48.16:0,48,1865	0/0:9,0:9:27.08:0,27,903	1/1:3,9:12:27.09:768,27,0	0/0:19,0:19:45.14:0,45,1860	0/0:20,0:20:57.19:0,57,2247	0/0:31,0:31:40.59:0,41,3187	1/1:8,2:10:21.05:440,21,0	1/1:4,6:10:24.08:709,24,0	1/1:5,2:7:3.48:71,3,0	0/0:7,0:5:6.02:0,6,213	0/0:7,0:7:21.05:0,21,572	0/0:25,0:25:65.98:0,66,2152	1/1:1,3:4:3.17:185,3,0	1/1:0,15:15:42.04:1086,42,0	1/1:4,5:9:18.06:496,18,0	1/1:0,1:1:3.01:94,3,0
chr10	56912843	.	GCT	G	851.06	PASS	AB=0.975;AC=16;AF=0.286;AN=56;BaseQRankSum=10.821;DP=485;FS=14.522;HRun=0;HaplotypeScore=143.9069;InbreedingCoeff=-0.0771;MQ=78.10;MQ0=4;MQRankSum=-7.035;QD=5.19;ReadPosRankSum=2.564;VQSLOD=2.5126;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,1:26:74.88:0,75,1411	0/1:2,0:2:30.54:41,0,31	0/1:44,0:29:24.34:24,0,949	0/0:83,1:49:22.15:0,22,698	0/0:10,0:10:30.10:0,30,609	0/0:14,0:14:42.11:0,42,813	0/0:28,0:29:85.04:0,85,1580	0/1:19,0:19:99:238,0,244	0/1:12,0:12:19.88:116,0,20	1/1:5,1:6:15.49:93,15,0	0/1:10,0:10:8.30:8,0,136	0/0:18,0:18:51.17:0,51,1013	0/0:17,0:17:51.16:0,51,999	0/0:9,0:9:27.09:0,27,548	0/1:11,1:12:99:191,0,113	0/0:18,0:18:54.18:0,54,1055	0/0:20,0:20:57.67:0,58,1145	0/0:30,0:30:76.50:0,77,1553	0/1:9,1:10:61.19:61,0,351	0/1:9,1:10:66.22:96,0,66	0/1:7,0:7:21.07:21,0,121	0/0:6,0:4:9.03:0,9,183	0/0:7,0:7:21.03:0,21,386	0/0:26,0:27:71.30:0,71,1379	0/1:4,0:4:8.56:9,0,29	0/1:15,0:15:8.33:94,0,8	0/1:9,0:9:12.54:13,0,96	1/1:1,0:1:2.37:8,2,0
chr10	56912853	.	GCT	G	1071.80	PASS	AB=0.988;AC=21;AF=0.375;AN=56;BaseQRankSum=8.338;DP=470;FS=9.888;HRun=0;HaplotypeScore=146.0719;InbreedingCoeff=0.5173;MQ=82.38;MQ0=3;MQRankSum=-6.297;QD=9.16;ReadPosRankSum=3.790;VQSLOD=3.0362;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,1:28:70.54:0,71,1308	1/1:1,1:2:0.89:2,1,0	0/0:45,0:29:31.91:0,32,1011	0/0:76,0:45:66.94:0,67,946	0/0:11,0:11:33.11:0,33,631	0/0:16,0:16:48.16:0,48,925	0/0:29,0:29:87.07:0,87,1641	0/1:16,0:16:99:285,0,167	1/1:12,0:12:11.38:71,11,0	0/1:6,0:6:13:67,0,13	1/1:9,0:9:8.23:36,8,0	0/0:17,0:17:51.17:0,51,965	0/0:16,0:16:45.15:0,45,891	0/0:8,0:8:24.08:0,24,417	0/1:14,0:15:2.30:79,0,2	0/0:15,0:15:45.14:0,45,878	0/0:21,0:21:63.22:0,63,1216	0/0:28,0:28:81.28:0,81,1622	0/1:6,0:6:63.26:89,0,63	1/1:9,1:10:18.62:183,19,0	1/1:5,1:6:2.75:40,3,0	0/0:7,0:5:12.04:0,12,206	0/0:6,0:6:15.05:0,15,304	0/0:26,0:26:63.04:0,63,1196	1/1:5,0:5:5.54:25,6,0	0/1:17,0:17:99:177,0,218	1/1:8,4:12:17.26:162,17,0	1/1:1,0:1:3.01:39,3,0
chr10	56912919	.	C	CTCTCTCTG	6687.38	PASS	AB=0.971;AC=27;AF=0.482;AN=56;BaseQRankSum=-5.653;DP=526;FS=14.978;HRun=0;HaplotypeScore=182.1608;InbreedingCoeff=0.8569;MQ=73.28;MQ0=4;MQRankSum=-5.401;QD=32.94;ReadPosRankSum=-4.908;VQSLOD=2.3043;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:34:72.25:0,72,1750	1/1:1,5:6:6.02:253,6,0	0/1:32,0:11:6.54:7,0,112	0/0:65,0:40:28.72:0,29,581	0/0:10,0:10:18.53:0,19,376	0/0:20,0:19:54.17:0,54,1290	0/0:29,0:29:69.22:0,69,1541	1/1:20,0:18:27.05:402,27,0	1/1:10,4:14:18.06:625,18,0	1/1:2,8:13:27.06:628,27,0	1/1:5,2:7:12.02:275,12,0	0/0:11,0:11:24.07:0,24,545	0/0:17,0:17:42.10:0,42,904	0/0:11,0:11:27.09:0,27,643	1/1:4,18:22:27.09:1138,27,0	0/0:14,0:14:30.10:0,30,692	0/0:32,0:32:66.60:0,67,1464	0/0:29,0:29:62.23:0,62,1288	1/1:10,11:25:42.11:949,42,0	1/1:2,8:13:15.05:559,15,0	1/1:3,7:10:3.01:126,3,0	0/0:7,0:6:18.06:0,18,473	0/0:11,0:11:18.04:0,18,388	0/0:32,0:32:48.10:0,48,999	1/1:0,8:10:9.03:379,9,0	1/1:12,1:14:33.04:588,33,0	1/1:0,9:11:15.05:632,15,0	1/1:0,4:5:3.01:127,3,0
chr10	56913367	.	CTCACGAACAAGCTT	C	20749.17	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=17.675;DP=585;FS=15.154;HRun=0;HaplotypeScore=238.5856;InbreedingCoeff=0.9927;MQ=79.02;MQ0=0;MQRankSum=-15.623;QD=88.67;ReadPosRankSum=0.928;VQSLOD=2.9375;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,114,7220	1/1:0,4:4:12.04:512,12,0	0/0:23,0:23:51.18:0,51,3366	0/0:11,0:11:27.06:0,27,884	0/0:27,0:27:78.04:0,78,5412	0/0:20,0:20:60.19:0,60,3895	0/0:30,0:30:84.27:0,84,5069	1/1:2,16:17:45.14:1651,45,0	1/1:2,18:20:48.16:2007,48,0	1/1:5,26:31:75.26:2839,75,0	1/1:2,14:16:36.12:1475,36,0	0/0:19,0:19:57.20:0,57,3868	0/0:23,0:23:69.24:0,69,4294	0/0:25,0:25:69.24:0,69,4542	1/1:6,22:28:47.67:1992,48,0	0/0:33,0:33:93.31:0,93,5855	0/0:28,0:28:78.25:0,78,4474	0/0:13,0:13:39.13:0,39,2710	1/1:3,13:16:39.12:1396,39,0	1/1:1,16:17:33.07:1280,33,0	1/1:5,6:11:15.05:549,15,0	0/0:8,0:8:21.07:0,21,1408	0/0:26,0:26:78.27:0,78,5035	0/0:25,0:25:75.26:0,75,5047	1/1:1,13:14:33.11:1315,33,0	1/1:3,23:25:63.22:2662,63,0	1/1:1,20:19:42.14:1791,42,0	1/1:0,12:12:30.10:1279,30,0
chr10	56914782	.	CACACAG	C	1960.48	PASS	AB=1.000;AC=25;AF=0.446;AN=56;BaseQRankSum=13.765;DP=831;FS=11.160;HRun=0;HaplotypeScore=251.7655;InbreedingCoeff=0.9130;MQ=57.38;MQ0=15;MQRankSum=-2.364;QD=5.26;ReadPosRankSum=-1.289;VQSLOD=1.0094;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:42:99:0,114,3173	1/1:16,0:16:23.93:132,24,0	0/0:47,0:27:21.88:0,22,613	0/0:62,0:31:53.77:0,54,735	0/0:26,0:26:68.79:0,69,1891	0/0:19,0:19:54.15:0,54,1603	0/0:27,0:27:66.05:0,66,2003	1/1:36,0:35:68.68:420,69,0	1/1:28,0:28:22.33:84,22,0	1/1:40,1:40:60.47:308,60,0	1/1:25,0:25:11.23:90,11,0	0/0:16,0:16:39.11:0,39,1008	0/0:18,0:17:51.11:0,51,1348	0/0:23,0:23:69.21:0,69,2103	1/1:30,1:31:25.65:102,26,0	0/0:28,0:28:69.22:0,69,2050	0/0:25,0:25:66.12:0,66,1915	0/0:24,0:24:43.88:0,44,1948	1/1:20,0:15:25.32:111,25,0	1/1:33,1:34:14.89:49,15,0	1/1:45,0:45:41.95:181,42,0	0/0:25,0:25:72.20:0,72,2094	0/0:32,0:32:81.22:0,81,2151	0/0:42,0:41:80.46:0,80,2231	1/1:27,0:27:14.40:55,14,0	1/1:32,1:33:12.68:353,13,0	1/1:27,0:27:53.04:281,53,0	0/1:10,0:9:21.34:21,0,33
chr10	56914784	.	CACAG	C	9015.19	PASS	AB=0.588;AC=25;AF=0.446;AN=56;BaseQRankSum=6.030;DP=822;FS=15.596;HRun=0;HaplotypeScore=202.0193;InbreedingCoeff=0.9205;MQ=56.59;MQ0=14;MQRankSum=-2.555;QD=24.63;ReadPosRankSum=-2.086;VQSLOD=3.1994;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:42:99:0,114,2495	1/1:11,6:17:34.28:417,34,0	0/0:48,0:25:30.31:0,30,560	0/0:60,0:31:53.87:0,54,709	0/0:26,0:26:67.44:0,67,1544	0/0:18,0:18:54.15:0,54,1264	0/0:27,0:27:69.05:0,69,1666	1/1:3,32:34:92.74:1281,93,0	1/1:2,25:27:30.01:535,30,0	1/1:5,33:37:99:1647,107,0	1/1:2,23:25:11.69:137,12,0	0/0:15,0:15:39.11:0,39,849	0/0:18,0:17:51.11:0,51,1114	0/0:23,0:23:69.21:0,69,1646	1/1:15,15:30:38.82:632,39,0	0/0:28,0:28:69.18:0,69,1628	0/0:25,0:25:66.12:0,66,1525	0/0:24,0:24:46.69:0,47,1535	1/1:9,10:14:15.66:419,16,0	1/1:6,28:34:20.08:379,20,0	1/1:25,20:45:56.24:897,56,0	0/0:25,0:25:72.14:0,72,1637	0/0:31,0:31:81.13:0,81,1697	0/0:42,0:41:81.46:0,81,1716	1/1:4,23:27:20.72:334,21,0	1/1:4,28:32:72.03:1237,72,0	1/1:12,15:27:62.97:889,63,0	0/1:3,7:9:19.64:212,0,20
chr10	56914788	.	GAC	G	1048.35	PASS	AB=1.000;AC=25;AF=0.446;AN=56;BaseQRankSum=13.923;DP=809;FS=0.000;HRun=0;HaplotypeScore=206.5268;InbreedingCoeff=0.8428;MQ=57.10;MQ0=16;MQRankSum=-3.285;QD=2.93;ReadPosRankSum=0.421;VQSLOD=2.5380;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:42:87.26:0,87,1402	1/1:16,0:16:10.02:40,10,0	0/0:47,0:24:31.47:0,31,314	0/0:64,0:29:33.61:0,34,356	0/0:25,0:25:62.80:0,63,989	0/0:19,0:19:10.99:0,11,694	0/0:27,0:27:45.21:0,45,1023	1/1:34,0:33:40.16:170,40,0	1/1:27,0:27:23.52:96,24,0	1/1:37,0:36:50.33:264,50,0	1/1:24,0:24:4.90:18,5,0	0/0:14,0:14:30.10:0,30,466	0/0:19,0:18:42.14:0,42,669	0/0:23,0:23:63.11:0,63,958	1/1:30,0:30:25.74:103,26,0	0/0:27,1:28:25.72:0,26,950	0/0:24,0:24:54.18:0,54,882	0/0:23,0:23:60.20:0,60,979	1/1:17,0:12:14.71:66,15,0	1/1:32,0:32:16.64:63,17,0	1/1:45,0:45:35.38:138,35,0	0/0:23,1:24:22.68:0,23,903	0/0:26,2:28:22.68:0,23,895	0/0:40,1:40:33.35:0,33,1039	1/1:25,0:25:11.96:54,12,0	1/1:34,0:34:0.75:119,1,0	1/1:27,0:27:5.63:100,6,0	0/1:10,0:9:12.06:31,0,12
chr10	56914849	.	AC	A	3884.07	PASS	AB=0.931;AC=29;AF=0.518;AN=56;BaseQRankSum=12.412;DP=588;FS=10.216;HRun=10;HaplotypeScore=187.4860;InbreedingCoeff=0.5755;MQ=54.97;MQ0=9;MQRankSum=-7.607;QD=10.76;ReadPosRankSum=5.811;VQSLOD=0.9939;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:9.42:0,9,84	1/1:3,6:9:18:156,18,0	0/1:29,1:13:6.60:7,0,164	0/0:27,1:12:15.95:0,16,230	0/0:15,0:15:13.77:0,14,165	0/1:15,2:17:16.15:16,0,266	0/0:27,0:26:57.06:0,57,571	1/1:13,19:31:53.82:463,54,0	1/1:4,26:30:53.47:467,53,0	1/1:6,19:25:60.97:501,61,0	0/0:3,12:15:0.20:0,0,1	0/0:21,0:21:41.95:0,42,386	0/1:12,0:12:6.56:7,0,121	0/1:17,3:20:16.80:17,0,247	1/1:3,26:29:17.49:155,17,0	0/0:18,1:19:13.02:0,13,343	0/0:22,1:23:11.65:0,12,298	0/1:11,1:11:7.99:8,0,136	1/1:7,6:13:17.96:156,18,0	1/1:4,24:28:38.14:337,38,0	1/1:6,22:28:36.51:305,37,0	0/0:17,1:18:1.36:0,1,202	0/0:14,0:14:18.02:0,18,184	0/0:31,1:32:22.49:0,22,437	1/1:4,18:22:17.86:156,18,0	1/1:3,21:24:62.97:545,63,0	1/1:5,23:28:65.92:563,66,0	1/1:0,1:1:3:26,3,0
chr10	56914861	.	CAA	C	758.21	PASS	AB=0.996;AC=9;AF=0.161;AN=56;BaseQRankSum=3.866;DP=657;FS=0.794;HRun=3;HaplotypeScore=199.3272;InbreedingCoeff=-0.0432;MQ=54.36;MQ0=20;MQRankSum=-3.375;QD=3.85;ReadPosRankSum=5.457;VQSLOD=-0.1841;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:22:32.36:0,32,424	0/0:6,0:6:17.91:0,18,189	0/0:45,0:15:6.46:0,6,182	0/0:46,2:18:0.18:0,0,216	0/0:15,0:15:30.16:0,30,349	0/0:22,0:22:45.65:0,46,514	0/0:30,0:29:46.67:0,47,721	0/0:28,0:28:57.85:0,58,768	0/1:30,1:30:99:219,0,121	0/1:29,0:29:99:142,0,122	0/0:15,2:16:5.97:0,6,76	0/0:22,0:22:26.16:0,26,369	0/0:15,0:14:24.83:0,25,485	0/0:18,0:19:35.26:0,35,407	0/1:31,0:31:87.03:87,0,135	0/0:18,0:18:38.99:0,39,418	0/0:19,0:19:35.95:0,36,441	0/0:15,0:13:24.30:0,24,320	0/1:14,0:11:40.60:41,0,64	0/1:28,0:28:9.03:9,0,214	0/0:34,0:33:9.02:0,9,209	0/0:21,0:21:27.24:0,27,446	0/0:11,0:11:17.41:0,17,215	0/0:32,0:32:52.31:0,52,694	0/0:20,0:19:31.88:0,32,261	0/1:29,0:29:82.48:166,0,82	0/1:34,0:34:99:215,0,124	1/1:1,0:1:2.84:14,3,0
chr10	56914863	.	AAC	A	4251.15	PASS	AB=0.939;AC=30;AF=0.536;AN=56;BaseQRankSum=7.708;DP=687;FS=15.846;HRun=0;HaplotypeScore=192.7109;InbreedingCoeff=0.2294;MQ=54.30;MQ0=21;MQRankSum=-6.261;QD=8.62;ReadPosRankSum=1.907;VQSLOD=3.4811;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:20,3:22:28.17:28,0,499	0/0:6,0:6:12.04:0,12,176	0/0:44,0:14:10.10:0,10,120	0/0:51,0:18:16.89:0,17,125	0/0:15,0:15:15.05:0,15,234	0/0:22,0:22:27.97:0,28,395	0/1:28,3:30:57.34:57,0,543	0/1:30,0:30:19.15:19,0,568	1/1:20,11:31:9.71:502,10,0	1/1:16,11:30:60.56:656,61,0	1/1:9,8:17:20.57:174,21,0	0/1:23,0:23:40.19:40,0,313	0/1:16,1:16:9.73:10,0,519	0/1:21,0:21:4.51:5,0,422	1/1:12,17:32:53.74:522,54,0	0/0:18,0:18:24.07:0,24,351	0/0:21,1:22:3.90:0,4,406	0/0:15,0:13:26.96:0,27,362	0/1:12,3:13:5.66:214,0,6	1/1:14,11:29:22.94:226,23,0	1/1:27,8:35:17.44:169,17,0	0/1:20,1:21:54.10:54,0,314	0/1:12,1:13:23.13:23,0,107	0/1:31,1:32:10.67:11,0,589	1/1:12,11:22:0.40:125,0,0	1/1:15,12:29:59.82:643,60,0	1/1:18,17:36:30.26:738,30,0	1/1:0,1:1:3.01:35,3,0
chr10	56914943	.	G	GACAC	12292.62	PASS	AB=0.753;AC=40;AF=0.714;AN=56;BaseQRankSum=1.848;DP=938;FS=0.438;HRun=0;HaplotypeScore=221.4031;InbreedingCoeff=0.3878;MQ=57.64;MQ0=9;MQRankSum=-3.697;QD=14.95;ReadPosRankSum=1.040;VQSLOD=4.3353;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:42:93.10:0,93,1318	1/1:4,0:11:19.47:103,19,0	0/1:66,0:35:7.21:7,0,59	0/1:72,0:34:40.99:41,0,155	0/0:16,0:20:26.95:0,27,399	1/1:7,8:18:22.57:462,23,0	0/1:13,16:31:10.49:679,0,10	0/1:16,0:41:7.33:297,0,7	1/1:25,0:30:26.41:341,26,0	1/1:34,0:41:61.09:778,61,0	1/1:17,0:21:26.03:301,26,0	1/1:10,22:34:35.86:815,36,0	0/0:24,0:25:48.14:0,48,731	0/0:28,0:29:56.54:0,57,1000	1/1:9,2:35:30.57:565,31,0	0/1:8,26:37:4.23:918,0,4	1/1:11,24:37:57.20:1368,57,0	1/1:4,18:26:32.10:561,32,0	1/1:18,0:16:6.49:85,6,0	1/1:21,0:29:15.70:573,16,0	0/1:54,0:58:26.67:427,0,27	1/1:12,22:34:30.06:731,30,0	0/1:9,11:26:11.21:537,0,11	1/1:9,42:54:68.84:1562,69,0	1/1:15,0:15:21:223,21,0	1/1:33,0:38:18.79:470,19,0	1/1:14,0:36:31.91:446,32,0	0/1:4,0:7:1.58:2,0,4
chr10	56916010	.	A	AG	6287.39	PASS	AB=0.889;AC=53;AF=0.946;AN=56;BaseQRankSum=3.661;DP=376;FS=50.289;HRun=1;HaplotypeScore=173.0414;InbreedingCoeff=0.7949;MQ=76.59;MQ0=0;MQRankSum=-7.729;QD=17.71;ReadPosRankSum=4.044;VQSLOD=1.6112;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,23:29:64.44:470,64,0	1/1:1,5:5:14.63:93,15,0	0/1:7,1:8:0.82:1,0,62	0/0:20,0:21:45.36:0,45,307	1/1:5,6:11:19.92:115,20,0	1/1:1,8:9:26.29:186,26,0	1/1:2,7:9:20.26:112,20,0	1/1:5,12:17:47.74:368,48,0	1/1:3,12:15:41.55:361,42,0	1/1:1,7:8:23.95:212,24,0	1/1:5,4:9:17.20:121,17,0	1/1:2,13:15:40.84:272,41,0	1/1:1,9:10:26.27:178,26,0	1/1:3,14:17:37.80:263,38,0	1/1:3,9:12:32.01:219,32,0	1/1:2,13:15:41.22:297,41,0	1/1:2,17:19:52.90:409,53,0	1/1:0,15:15:41.80:346,42,0	1/1:3,3:6:17.99:192,18,0	1/1:5,14:19:38.14:311,38,0	1/1:4,14:18:38.07:284,38,0	1/1:3,10:13:31.54:195,32,0	1/1:4,6:10:25.29:156,25,0	1/1:3,14:16:34.79:254,35,0	1/1:4,5:9:20.30:135,20,0	1/1:3,12:14:41.77:352,42,0	1/1:5,12:17:43.41:278,43,0	1/1:2,5:7:14.75:103,15,0
chr10	56916017	.	G	GGA	10662.45	PASS	AB=0.893;AC=54;AF=0.964;AN=56;BaseQRankSum=1.243;DP=374;FS=1.638;HRun=0;HaplotypeScore=161.6602;InbreedingCoeff=-0.0500;MQ=79.14;MQ0=0;MQRankSum=-2.816;QD=28.51;ReadPosRankSum=3.270;VQSLOD=6.3474;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:30:78.27:854,78,0	1/1:5,0:4:12.03:136,12,0	0/1:11,1:12:20.94:88,0,21	0/1:14,3:19:32.95:181,0,33	1/1:11,0:11:15.04:186,15,0	1/1:9,0:9:27.04:307,27,0	1/1:11,0:11:29.56:315,30,0	1/1:16,0:16:42.93:419,43,0	1/1:16,0:16:47.62:584,48,0	1/1:7,0:7:20.96:265,21,0	1/1:5,0:5:12.03:129,12,0	1/1:14,0:14:38.78:430,39,0	1/1:13,0:13:33.09:401,33,0	1/1:14,0:14:40.54:414,41,0	1/1:13,0:13:30.01:358,30,0	1/1:15,0:15:42.11:496,42,0	1/1:20,0:20:53.01:657,53,0	1/1:16,0:16:45.15:624,45,0	1/1:5,0:5:14.87:168,15,0	1/1:23,0:23:56.58:688,57,0	1/1:20,0:20:47.59:540,48,0	1/1:13,0:13:35.02:365,35,0	1/1:7,0:7:1.06:191,1,0	1/1:15,0:14:36.54:455,37,0	1/1:9,0:9:20.23:216,20,0	1/1:14,0:13:35.98:448,36,0	1/1:17,0:17:50.99:553,51,0	1/1:5,0:5:15.05:190,15,0
chr10	56916018	.	A	AG	13329.07	PASS	AB=0.728;AC=54;AF=0.964;AN=56;BaseQRankSum=1.363;DP=407;FS=2.028;HRun=1;HaplotypeScore=158.5315;InbreedingCoeff=-0.0409;MQ=75.64;MQ0=0;MQRankSum=-4.455;QD=32.75;ReadPosRankSum=3.557;VQSLOD=4.6404;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,25:35:80.85:1093,81,0	1/1:0,5:4:12.04:179,12,0	0/1:7,5:12:12.08:157,0,12	0/1:12,5:18:28.45:358,0,28	1/1:1,12:13:15.05:222,15,0	1/1:2,9:11:27.09:402,27,0	1/1:3,10:13:30.06:411,30,0	1/1:4,12:16:39.05:532,39,0	1/1:0,16:16:48.12:689,48,0	1/1:0,7:7:21.07:312,21,0	1/1:2,5:7:12.04:178,12,0	1/1:4,12:16:39.09:556,39,0	1/1:4,12:16:33.11:474,33,0	1/1:3,12:15:39.09:542,39,0	1/1:2,14:16:30.10:445,30,0	1/1:0,15:15:42.14:620,42,0	1/1:1,18:19:54.07:743,54,0	1/1:0,16:16:45.15:668,45,0	1/1:2,4:6:15.05:224,15,0	1/1:4,20:24:57.14:817,57,0	1/1:5,17:22:48.56:676,49,0	1/1:4,12:16:36.08:491,36,0	1/1:5,7:12:16.63:266,17,0	1/1:1,15:15:36.11:535,36,0	1/1:2,7:9:18.06:268,18,0	1/1:3,11:13:36.11:518,36,0	1/1:1,16:17:51.16:730,51,0	1/1:0,5:5:15.05:223,15,0
chr10	56916019	.	G	GC	6633.52	PASS	AB=1.000;AC=53;AF=0.946;AN=56;BaseQRankSum=1.811;DP=421;FS=0.000;HRun=4;HaplotypeScore=184.1619;InbreedingCoeff=-0.0567;MQ=75.83;MQ0=0;MQRankSum=-3.500;QD=15.76;ReadPosRankSum=4.318;VQSLOD=3.7292;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:33,1:34:69.40:530,69,0	1/1:5,0:4:11.99:104,12,0	0/1:13,0:13:31.48:40,0,31	0/1:18,0:18:21.55:121,0,22	0/1:14,0:14:1.91:96,0,2	1/1:14,0:14:26.82:204,27,0	1/1:13,0:13:9.10:201,9,0	1/1:18,0:18:32.79:249,33,0	1/1:16,0:16:44.64:336,45,0	1/1:9,0:9:20.78:155,21,0	1/1:9,0:9:12:106,12,0	1/1:15,2:17:35.90:303,36,0	1/1:15,1:16:32.82:277,33,0	1/1:13,0:13:35.86:320,36,0	1/1:17,0:17:13.08:234,13,0	1/1:15,0:15:41.82:333,42,0	1/1:18,0:18:47.64:355,48,0	1/1:16,0:16:44.70:332,45,0	1/1:7,0:7:14.78:99,15,0	1/1:23,0:23:53.42:396,53,0	1/1:22,0:22:36.14:263,36,0	1/1:16,0:16:15.98:247,16,0	1/1:13,0:13:17.88:137,18,0	1/1:16,0:15:35.58:277,36,0	1/1:8,0:8:17.82:130,18,0	1/1:19,0:18:29.65:230,30,0	1/1:16,1:17:50.89:440,51,0	1/1:5,0:5:14.96:120,15,0
chr10	56916224	.	G	GA	10650.86	PASS	AB=0.953;AC=51;AF=0.911;AN=56;BaseQRankSum=4.596;DP=641;FS=23.575;HRun=1;HaplotypeScore=217.2687;InbreedingCoeff=-0.0968;MQ=79.65;MQ0=0;MQRankSum=-9.109;QD=16.62;ReadPosRankSum=7.446;VQSLOD=2.3922;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:40,0:40:37.28:599,37,0	0/1:12,0:12:8.77:213,0,9	0/1:25,2:27:78.48:78,0,317	0/1:24,6:29:99:175,0,223	1/1:21,0:21:44.87:370,45,0	1/1:16,0:16:17.98:286,18,0	1/1:20,0:20:10.12:342,10,0	1/1:36,0:36:25.50:548,26,0	1/1:32,0:32:37.86:566,38,0	1/1:29,0:29:36.35:471,36,0	1/1:17,0:17:38.90:325,39,0	1/1:30,0:30:63.77:656,64,0	1/1:30,0:30:72.28:590,72,0	1/1:22,0:22:25.95:355,26,0	1/1:38,0:38:99:895,111,0	1/1:23,0:23:35.98:403,36,0	1/1:20,0:19:25.08:360,25,0	1/1:16,0:16:12.83:199,13,0	0/1:19,0:19:2.72:288,0,3	1/1:18,0:18:42.72:334,43,0	0/1:29,0:29:4.59:277,0,5	1/1:13,0:13:32.79:260,33,0	1/1:15,0:15:36.30:309,36,0	1/1:5,0:6:11.92:88,12,0	1/1:17,0:17:38.82:308,39,0	1/1:30,0:30:60.69:592,61,0	1/1:27,0:27:77.69:619,78,0	1/1:8,0:8:1.05:143,1,0
chr10	56916225	.	A	AG	21425.14	PASS	AB=0.748;AC=54;AF=0.964;AN=56;BaseQRankSum=-2.630;DP=645;FS=15.725;HRun=2;HaplotypeScore=180.2405;InbreedingCoeff=-0.0384;MQ=80.11;MQ0=0;MQRankSum=-6.798;QD=33.22;ReadPosRankSum=2.306;VQSLOD=2.4076;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,36:42:93.12:1238,93,0	1/1:2,10:12:30.10:431,30,0	0/1:16,13:29:99:379,0,219	0/1:22,7:28:99:502,0,198	1/1:2,20:22:45.15:640,45,0	1/1:1,14:15:39.13:556,39,0	1/1:3,17:20:48.16:689,48,0	1/1:7,30:37:99:1370,99,0	1/1:5,28:33:81.26:1141,81,0	1/1:4,25:29:72.04:1026,72,0	1/1:0,17:17:39.13:556,39,0	1/1:1,29:30:87.29:1245,87,0	1/1:1,28:30:75.24:1060,75,0	1/1:3,17:20:48.16:689,48,0	1/1:2,37:39:99:1620,114,0	1/1:2,21:23:60.10:798,60,0	1/1:1,19:19:48.16:689,48,0	1/1:6,11:17:35.95:487,36,0	1/1:4,15:19:48.15:674,48,0	1/1:2,16:18:45.14:605,45,0	1/1:7,23:30:51.05:666,51,0	1/1:0,13:13:36.08:494,36,0	1/1:1,14:15:42.07:572,42,0	1/1:1,5:6:12.04:167,12,0	1/1:0,16:16:39.13:555,39,0	1/1:2,27:29:81.27:1163,81,0	1/1:0,27:27:78.26:1114,78,0	1/1:1,7:8:21.07:298,21,0
chr10	56918428	.	TA	T	7031.13	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=11.544;DP=571;FS=10.551;HRun=8;HaplotypeScore=63.8518;InbreedingCoeff=0.9923;MQ=74.13;MQ0=3;MQRankSum=0.550;QD=23.44;ReadPosRankSum=2.900;VQSLOD=5.2122;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:72.13:0,72,795	1/1:2,9:11:27.04:260,27,0	0/0:31,1:13:16.85:0,17,237	0/0:28,0:16:12.69:0,13,108	0/0:25,0:25:66.04:0,66,726	0/0:19,0:19:48.13:0,48,555	0/0:16,0:16:39.11:0,39,459	1/1:4,30:34:90.08:847,90,0	1/1:1,15:16:42.06:405,42,0	1/1:6,27:33:78.10:748,78,0	1/1:3,22:25:63.80:578,64,0	0/0:16,0:16:39.11:0,39,459	0/0:10,0:10:27.07:0,27,316	0/0:16,0:16:42.13:0,42,507	1/1:2,14:16:33.05:318,33,0	0/0:18,0:18:42.09:0,42,473	0/0:16,0:16:45.13:0,45,531	0/0:16,0:16:39.12:0,39,470	1/1:5,19:24:57.07:544,57,0	1/1:1,31:32:90.04:848,90,0	1/1:1,17:18:48.08:463,48,0	0/0:5,0:5:15.05:0,15,181	0/0:14,0:14:36.07:0,36,399	0/0:16,0:16:41.94:0,42,496	1/1:3,20:23:54.09:521,54,0	1/1:3,24:27:72.11:694,72,0	1/1:1,23:24:42.07:405,42,0	1/1:2,15:17:38.07:399,38,0
chr10	56919184	.	CAT	C	3482.84	PASS	AB=0.997;AC=39;AF=0.696;AN=56;BaseQRankSum=-1.934;DP=478;FS=26.384;HRun=0;HaplotypeScore=59.5435;InbreedingCoeff=-0.0858;MQ=51.73;MQ0=14;MQRankSum=-1.896;QD=7.84;ReadPosRankSum=-5.375;VQSLOD=0.1094;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:40,0:39:86.86:87,0,469	1/1:9,0:8:14.94:117,15,0	0/1:26,0:14:7.56:8,0,166	0/1:20,0:7:10.95:11,0,50	0/1:18,0:18:28.90:29,0,162	0/0:17,0:17:7.99:0,8,227	0/1:23,0:23:60.25:60,0,170	1/1:10,0:10:29.69:213,30,0	1/1:12,0:12:32.78:252,33,0	1/1:12,0:11:26.92:233,27,0	1/1:6,0:5:14.96:120,15,0	0/0:17,0:17:17.84:0,18,154	0/1:15,0:15:34.71:35,0,183	0/1:17,0:17:33.02:33,0,250	1/1:13,0:13:35.92:288,36,0	0/1:15,0:15:13.83:14,0,139	0/1:21,0:21:24.86:25,0,232	0/1:22,0:21:24.44:24,0,333	1/1:10,0:9:20.18:157,20,0	1/1:3,5:8:11.92:90,12,0	1/1:33,0:32:77.62:617,78,0	0/1:13,0:12:14.13:14,0,203	0/1:13,0:8:23.88:24,0,35	0/1:35,0:31:49.69:50,0,398	1/1:11,0:11:23.59:192,24,0	1/1:15,0:15:44.63:337,45,0	1/1:15,0:15:36.20:266,36,0	1/1:10,0:10:26.34:188,26,0
chr10	56919186	.	T	TACAC	1384.93	PASS	AB=0.985;AC=31;AF=0.620;AN=50;BaseQRankSum=-0.385;DP=483;FS=0.000;HRun=0;HaplotypeScore=88.8109;InbreedingCoeff=0.2835;MQ=50.85;MQ0=14;MQRankSum=0.480;QD=4.73;ReadPosRankSum=-1.883;VQSLOD=1.7032;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:42:11.44:0,11,89	0/0:9,0:8:3:0,3,27	./.	./.	0/1:18,0:18:2.74:3,0,105	1/1:16,0:16:5.75:81,6,0	1/1:23,0:23:6.41:76,6,0	1/1:12,0:12:3.86:23,4,0	0/0:11,0:11:3.23:0,3,9	1/1:12,0:11:1.02:2,1,0	0/0:6,0:5:0.47:0,0,1	1/1:7,9:16:3.01:71,3,0	0/0:14,0:14:10.48:0,10,78	0/0:17,0:17:17.32:0,17,159	1/1:14,0:14:2.99:23,3,0	1/1:15,0:15:11.77:153,12,0	1/1:21,0:21:11.73:139,12,0	0/1:20,1:20:46.56:165,0,47	1/1:9,0:7:0.47:1,0,0	./.	0/0:35,0:34:2.80:0,3,11	1/1:13,0:12:12.02:165,12,0	0/1:12,0:7:8.50:46,0,9	0/1:33,0:30:9.11:432,0,9	0/1:11,0:11:18.97:19,0,21	1/1:17,0:17:11.17:64,11,0	1/1:18,0:18:5.36:46,5,0	1/1:11,0:11:2.93:23,3,0
chr10	56920390	.	TTGTGTGTGTGTGTGTG	T	1048.02	PASS	AB=0.915;AC=14;AF=0.269;AN=52;BaseQRankSum=5.273;DP=536;FS=20.227;HRun=0;HaplotypeScore=197.9774;InbreedingCoeff=0.3202;MQ=68.12;MQ0=13;MQRankSum=-3.564;QD=7.33;ReadPosRankSum=0.222;VQSLOD=1.1021;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:30.10:0,30,1501	0/0:4,0:7:5.38:0,5,45	./.	0/0:36,0:25:2.22:0,2,7	0/0:21,0:21:15.05:0,15,881	0/0:14,0:14:12.04:0,12,867	0/0:27,0:27:26.93:0,27,1591	0/0:23,0:21:6.02:0,6,168	1/1:11,5:17:5.66:241,6,0	0/1:9,0:11:99:136,0,151	0/0:5,0:11:2.23:0,2,22	0/0:17,0:17:21.07:0,21,1139	0/0:14,0:14:9.03:0,9,452	0/0:20,0:20:12.93:0,13,485	1/1:10,5:15:6.02:261,6,0	0/0:15,0:20:21.07:0,21,1097	0/0:31,0:33:52.03:0,52,2796	0/0:22,0:27:13.86:0,14,625	0/0:13,0:13:3.11:0,3,8	1/1:11,1:12:3.01:77,3,0	0/1:33,0:32:17.29:35,0,17	0/0:15,0:15:9.03:0,9,549	./.	0/0:32,0:31:30.99:0,31,1961	1/1:7,4:11:3.48:131,3,0	0/1:21,0:21:24.25:41,0,24	0/1:10,0:12:38.81:202,0,39	1/1:9,0:9:3.01:72,3,0
chr10	56920872	.	A	AGTGTGTGTGTGTGT	2318.05	PASS	AB=0.980;AC=13;AF=0.232;AN=56;BaseQRankSum=7.718;DP=712;FS=5.447;HRun=0;HaplotypeScore=286.6059;InbreedingCoeff=-0.1553;MQ=67.57;MQ0=9;MQRankSum=-7.282;QD=9.16;ReadPosRankSum=-7.405;VQSLOD=0.0263;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:89.89:0,90,2252	1/1:4,0:4:3.19:65,3,0	0/0:49,0:26:26.95:0,27,584	0/0:51,0:30:39.61:0,40,752	0/0:24,0:24:69.16:0,69,1811	0/0:27,0:26:53.05:0,53,1682	0/0:38,0:37:99:0,99,2474	0/1:34,0:33:51.16:51,0,605	0/1:21,0:20:54.25:261,0,54	0/1:19,0:19:99:432,0,212	0/0:18,0:17:20.37:0,20,208	0/0:24,0:24:53.30:0,53,1614	0/0:19,0:19:42.11:0,42,1048	0/0:21,0:20:51.10:0,51,1278	0/1:29,0:29:99:288,0,405	0/0:27,0:27:66.19:0,66,2273	0/0:40,0:39:99:0,105,2999	0/0:23,0:23:63.16:0,63,1732	0/1:15,0:14:99:352,0,124	0/1:18,0:18:41.36:41,0,122	0/1:46,0:45:99:182,0,663	0/0:14,0:14:36.10:0,36,836	0/0:11,0:11:24.05:0,24,452	0/0:35,0:35:93.22:0,93,2296	0/1:12,0:11:35.91:36,0,85	0/1:22,0:21:99:398,0,322	0/1:15,1:21:99:226,0,266	0/1:12,0:12:99:140,0,233
chr10	56921766	.	TCTTC	T	5860.95	PASS	AB=0.545;AC=25;AF=0.463;AN=54;BaseQRankSum=10.498;DP=496;FS=8.395;HRun=0;HaplotypeScore=74.1578;InbreedingCoeff=0.8917;MQ=51.20;MQ0=30;MQRankSum=-2.134;QD=27.39;ReadPosRankSum=-2.372;VQSLOD=3.2160;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:31:83.34:0,83,1920	1/1:6,0:10:30:322,30,0	./.	0/0:18,0:5:6:0,6,96	0/0:22,0:21:60.17:0,60,1254	0/0:17,0:17:48.07:0,48,1131	0/0:16,0:15:42.57:0,43,741	1/1:12,0:12:31.58:376,32,0	1/1:0,18:18:24.08:502,24,0	1/1:1,14:14:33.04:630,33,0	1/1:1,7:8:8.92:102,9,0	0/0:8,0:8:21.07:0,21,502	0/0:18,0:18:54.18:0,54,1203	0/0:11,0:10:30.10:0,30,672	1/1:2,15:16:36.12:700,36,0	0/0:23,0:23:56.76:0,57,1301	0/0:25,0:25:57.07:0,57,1303	0/0:21,0:21:63.19:0,63,1252	1/1:3,14:17:46.60:685,47,0	1/1:2,18:21:38.82:530,39,0	0/1:2,10:12:26.72:77,0,27	0/0:20,0:19:57.18:0,57,1207	0/0:20,0:20:60.20:0,60,1350	0/0:20,0:21:53.67:0,54,1072	1/1:2,15:15:12:185,12,0	1/1:2,23:23:63.04:1065,63,0	1/1:1,23:23:21.07:434,21,0	1/1:0,8:8:12.04:252,12,0
chr10	56921769	.	TC	T	2201.16	PASS	AB=1.000;AC=25;AF=0.463;AN=54;BaseQRankSum=14.128;DP=495;FS=5.128;HRun=1;HaplotypeScore=64.3434;InbreedingCoeff=0.8667;MQ=49.91;MQ0=29;MQRankSum=-4.207;QD=10.24;ReadPosRankSum=-1.622;VQSLOD=0.9017;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:30:78.59:0,79,918	1/1:6,3:9:26.92:223,27,0	./.	0/0:14,0:3:5.98:0,6,47	0/0:22,0:21:54.84:0,55,562	0/0:17,0:17:44.96:0,45,524	0/0:16,0:15:39.42:0,39,377	1/1:14,6:14:33.34:263,33,0	1/1:18,0:18:23.64:155,24,0	1/1:15,0:14:32.60:240,33,0	1/1:9,0:8:8.85:57,9,0	0/0:10,0:10:14.48:0,14,219	0/0:18,0:18:48.40:0,48,577	0/0:11,0:10:29.95:0,30,320	1/1:18,0:16:34.57:207,35,0	0/0:22,0:22:53.66:0,54,640	0/0:25,0:25:53.96:0,54,657	0/0:23,0:23:59.48:0,59,634	1/1:18,0:17:46.22:365,46,0	1/1:21,1:21:2.48:138,2,0	0/1:12,0:12:9.01:21,0,9	0/0:20,0:19:57.04:0,57,621	0/0:21,0:21:52.14:0,52,580	0/0:20,1:21:12.65:0,13,462	1/1:17,0:15:11.82:76,12,0	1/1:25,0:23:58.89:455,59,0	1/1:24,0:23:20.66:144,21,0	1/1:8,0:8:11.77:71,12,0
chr10	56922074	.	GAC	G	36.98	PASS	AB=0.900;AC=8;AF=0.182;AN=44;BaseQRankSum=1.051;DP=326;FS=0.000;HRun=0;HaplotypeScore=64.7440;InbreedingCoeff=0.1449;MQ=29.73;MQ0=78;MQRankSum=-0.498;QD=0.45;ReadPosRankSum=0.793;VQSLOD=1.0372;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:17:3.01:0,3,46	0/0:5,0:5:2.97:0,3,20	./.	./.	0/1:12,4:14:36.77:59,0,37	./.	0/1:18,0:8:0.02:0,0,0	0/0:9,0:1:3.01:0,3,40	0/0:11,0:8:3.48:0,3,40	0/0:9,0:8:18.06:0,18,234	0/0:11,0:11:0:0,0,0	0/0:16,0:14:6.02:0,6,74	0/1:9,2:12:35.99:36,0,80	1/1:8,5:11:2.87:34,3,0	0/0:5,0:7:5.74:0,6,38	0/0:14,0:12:3.01:0,3,37	0/0:14,0:12:2.99:0,3,40	0/0:9,0:4:9.03:0,9,120	./.	0/0:8,0:9:6:0,6,52	0/0:21,0:13:3.44:0,3,21	./.	1/1:10,0:9:0.47:1,0,0	0/0:13,0:15:3.47:0,3,27	0/1:13,0:11:0:0,0,0	0/0:14,0:10:15.51:0,16,185	0/0:9,0:9:9.02:0,9,96	./.
chr10	56922280	.	A	AG	5467.54	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=9.425;DP=411;FS=5.721;HRun=0;HaplotypeScore=58.2385;InbreedingCoeff=0.9685;MQ=61.43;MQ0=3;MQRankSum=0.380;QD=33.34;ReadPosRankSum=-1.170;VQSLOD=3.8111;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:90.28:0,90,1220	1/1:0,10:10:27.03:356,27,0	0/0:10,0:7:18.06:0,18,240	0/0:14,0:6:14.94:0,15,164	0/0:21,0:21:54.18:0,54,744	0/0:13,0:12:36.10:0,36,480	0/0:23,0:21:56.99:0,57,791	1/1:4,20:23:52.49:692,52,0	1/1:0,5:5:15.05:198,15,0	1/1:3,11:14:33.09:423,33,0	1/1:0,9:9:24.08:315,24,0	0/0:11,0:11:30.10:0,30,419	0/0:8,0:8:24.08:0,24,328	0/0:7,0:7:21.07:0,21,294	1/1:1,16:17:48.11:610,48,0	0/0:18,0:16:51.17:0,51,702	0/0:24,0:22:63.21:0,63,881	0/0:14,0:14:39.13:0,39,538	1/1:4,8:10:24.55:307,25,0	1/1:0,10:10:24.08:321,24,0	1/1:0,15:15:39.13:514,39,0	0/0:15,0:15:39.13:0,39,545	0/0:13,0:13:39.13:0,39,541	0/0:23,0:23:57.19:0,57,796	1/1:0,12:11:33.06:414,33,0	1/1:1,16:17:51.11:656,51,0	1/1:0,16:16:48.15:623,48,0	1/1:0,3:3:3.01:39,3,0
chr10	56926325	.	CT	C	8124.11	PASS	AB=1.000;AC=27;AF=0.482;AN=56;BaseQRankSum=10.680;DP=429;FS=10.258;HRun=3;HaplotypeScore=48.0153;InbreedingCoeff=0.9337;MQ=62.39;MQ0=0;MQRankSum=0.061;QD=35.17;ReadPosRankSum=1.629;VQSLOD=4.7592;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:40:99:0,114,1758	1/1:1,7:8:16.75:239,17,0	0/0:6,0:4:8.66:0,9,138	0/1:5,0:3:3.14:3,0,10	0/0:23,0:23:69.23:0,69,1078	0/0:17,0:17:51.17:0,51,787	0/0:9,0:9:27.08:0,27,402	1/1:1,33:31:93.30:1268,93,0	1/1:1,7:8:20.56:259,21,0	1/1:0,16:16:45.15:615,45,0	1/1:0,27:27:75.24:1016,75,0	0/0:5,0:5:15.05:0,15,237	0/0:10,0:10:30.09:0,30,457	0/0:8,0:7:21.07:0,21,326	1/1:3,18:21:54.16:758,54,0	0/0:8,0:8:18.06:0,18,286	0/0:27,0:27:78.22:0,78,1208	0/0:23,0:23:56.85:0,57,883	1/1:2,22:24:66.22:906,66,0	1/1:2,10:12:26.46:368,26,0	1/1:0,11:11:21.07:293,21,0	0/0:6,0:6:18.05:0,18,247	0/0:11,0:11:27.09:0,27,427	0/0:4,0:4:12.04:0,12,189	1/1:0,17:17:48.16:663,48,0	1/1:0,15:15:45.14:607,45,0	1/1:0,18:18:39.13:545,39,0	1/1:0,15:15:42.14:584,42,0
chr10	56926662	.	T	TACACACAC	6867.05	PASS	AC=42;AF=0.840;AN=50;BaseQRankSum=1.293;DP=596;FS=0.766;HRun=0;HaplotypeScore=191.6574;InbreedingCoeff=0.6534;MQ=61.82;MQ0=11;MQRankSum=-6.318;QD=16.71;ReadPosRankSum=-4.400;VQSLOD=3.1973;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:41:16.13:0,16,794	1/1:7,0:7:3:25,3,0	./.	./.	0/0:17,0:18:23.86:0,24,490	1/1:27,0:30:10.21:309,10,0	1/1:21,1:22:9.50:313,10,0	1/1:28,0:28:48.14:1305,48,0	1/1:16,3:22:10.57:273,11,0	1/1:15,4:22:24.06:682,24,0	1/1:14,6:21:3.01:123,3,0	1/1:14,0:14:2.99:24,3,0	0/0:17,0:17:20.41:0,20,406	0/0:15,0:15:15.05:0,15,375	1/1:15,2:23:12.04:454,12,0	1/1:22,0:26:15.05:503,15,0	1/1:21,0:21:12.93:320,13,0	1/1:16,0:18:24.08:690,24,0	1/1:16,0:16:13.86:293,14,0	./.	1/1:32,0:28:2.92:64,3,0	1/1:13,0:13:8.77:102,9,0	1/1:17,0:17:5.98:128,6,0	1/1:15,0:14:5.39:151,5,0	1/1:11,1:13:3.01:123,3,0	1/1:14,0:13:14.74:287,15,0	1/1:15,4:19:12.04:472,12,0	1/1:9,1:13:9.01:227,9,0
chr10	56927265	.	G	GGATGTGGCTGCC	21131.94	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-6.236;DP=618;FS=1.535;HRun=0;HaplotypeScore=193.2580;InbreedingCoeff=0.9024;MQ=85.52;MQ0=0;MQRankSum=-13.151;QD=80.05;ReadPosRankSum=-3.324;VQSLOD=4.1774;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,111,3712	1/1:1,1:10:2.61:185,3,0	0/0:21,0:21:50.30:0,50,1388	0/0:25,0:25:74.98:0,75,2185	0/0:15,0:15:39.12:0,39,1328	0/0:15,0:15:39.13:0,39,1397	0/0:29,0:29:78.22:0,78,2431	1/1:9,3:27:78.18:2453,78,0	1/1:6,13:25:57.19:3134,57,0	1/1:3,6:16:36.12:1754,36,0	1/1:9,0:9:8.94:91,9,0	0/0:32,0:32:90.30:0,90,3195	0/0:19,0:19:54.19:0,54,1958	0/0:17,0:17:51.17:0,51,1803	1/1:6,10:26:42.14:2411,42,0	0/0:25,0:25:6.24:0,6,2192	0/0:32,0:32:90.24:0,90,3008	0/0:23,0:23:57.08:0,57,1700	1/1:6,4:26:72.13:2333,72,0	1/1:2,4:15:17.99:940,18,0	1/1:10,4:29:20.80:1155,21,0	0/0:18,0:18:54.18:0,54,1962	0/0:15,0:15:45.10:0,45,1501	0/0:31,0:31:84.23:0,84,2675	1/1:3,1:18:3.01:185,3,0	1/1:3,6:29:69.18:2196,69,0	1/1:4,23:32:68.97:4229,69,0	1/1:2,0:2:3.01:67,3,0
chr10	56928101	.	GAGGTCAGGGGCTAT	G	31368.59	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=17.074;DP=654;FS=1.929;HRun=0;HaplotypeScore=253.6047;InbreedingCoeff=0.9892;MQ=74.81;MQ0=0;MQRankSum=-15.471;QD=69.09;ReadPosRankSum=2.150;VQSLOD=4.3410;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,135,8606	0/0:9,0:9:24.07:0,24,1377	0/0:25,0:25:75.25:0,75,3781	0/0:13,0:13:29.08:0,29,1572	0/0:20,0:20:60.18:0,60,3471	1/1:0,25:25:54.19:2207,54,0	1/1:0,25:25:51.18:1948,51,0	0/0:27,0:27:75.23:0,75,4499	1/1:1,30:31:57.20:2382,57,0	1/1:1,26:27:72.16:2211,72,0	1/1:0,18:18:30.57:927,31,0	1/1:2,26:28:60.21:2510,60,0	0/0:27,0:27:75.24:0,75,4667	0/0:33,0:33:96.29:0,96,6251	1/1:1,24:25:45.15:1851,45,0	1/1:0,19:19:39.13:1663,39,0	1/1:2,22:24:30.10:1216,30,0	1/1:0,20:20:18.06:768,18,0	1/1:0,19:19:54.15:1409,54,0	1/1:1,22:23:51.09:1302,51,0	1/1:3,24:27:21.07:771,21,0	1/1:1,33:34:81.28:2781,81,0	1/1:0,11:11:20.58:767,21,0	1/1:1,20:21:12.41:512,12,0	1/1:0,22:22:42.14:1553,42,0	1/1:1,21:22:63.18:2080,63,0	1/1:1,23:24:45.15:1871,45,0	1/1:0,9:9:15.05:640,15,0
chr10	56929465	.	G	GGAGGGAGGGAGA	2891.99	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-2.154;DP=625;FS=7.482;HRun=0;HaplotypeScore=201.4770;InbreedingCoeff=0.9068;MQ=57.97;MQ0=5;MQRankSum=-7.447;QD=15.80;ReadPosRankSum=-1.855;VQSLOD=1.5479;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:86.94:0,87,2154	0/0:17,0:17:30.07:0,30,413	0/0:30,0:21:10.57:0,11,120	0/0:38,0:26:15.15:0,15,205	0/0:15,0:15:27.08:0,27,811	1/1:8,7:17:6.02:347,6,0	1/1:23,0:23:12.04:267,12,0	0/0:25,0:25:38.92:0,39,461	0/0:23,0:23:24.08:0,24,441	0/0:20,0:20:36.07:0,36,525	0/0:18,0:18:27.03:0,27,425	1/1:7,11:22:6.02:217,6,0	0/0:15,0:15:39.12:0,39,1066	0/0:19,0:19:13.40:0,13,563	0/0:27,0:27:30.07:0,30,469	1/1:4,13:21:9.03:528,9,0	1/1:16,5:24:6.02:214,6,0	1/1:9,0:9:11.97:310,12,0	0/0:14,0:14:12.03:0,12,175	0/0:25,0:25:40.32:0,40,580	0/0:34,0:34:38.94:0,39,552	1/1:21,0:21:16.24:232,16,0	1/1:14,0:14:17.99:238,18,0	1/1:30,0:30:37.89:739,38,0	0/0:15,0:15:21.05:0,21,366	0/0:31,0:31:45.14:0,45,684	0/0:25,0:24:27.09:0,27,436	0/0:11,0:11:18.04:0,18,268
chr10	56929485	.	G	GGA	6296.74	PASS	AB=0.701;AC=21;AF=0.375;AN=56;BaseQRankSum=-9.075;DP=632;FS=1.338;HRun=0;HaplotypeScore=83.1671;InbreedingCoeff=0.1921;MQ=56.93;MQ0=7;MQRankSum=0.970;QD=17.35;ReadPosRankSum=3.659;VQSLOD=4.7076;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:39:96.11:0,96,1130	0/1:7,10:17:38.58:313,0,39	0/0:16,0:8:10.53:0,11,76	0/0:29,0:14:7.40:0,7,75	0/0:18,0:18:36.09:0,36,427	0/0:22,0:21:0.56:0,1,336	0/0:20,0:20:32.36:0,32,402	1/1:14,21:35:60.17:820,60,0	0/1:5,14:19:12.57:316,0,13	1/1:1,17:20:9.44:756,9,0	0/1:6,13:19:7.54:353,0,8	0/1:20,0:19:7.22:7,0,83	0/0:19,0:19:45.11:0,45,523	0/0:18,0:19:34.92:0,35,408	0/1:11,18:29:9.64:362,0,10	0/1:24,0:23:33.80:34,0,143	0/1:14,0:15:13.01:13,0,147	0/0:11,0:11:15.81:0,16,143	1/1:16,0:15:21.01:246,21,0	1/1:9,18:27:36.12:573,36,0	0/1:9,20:30:49.76:538,0,50	0/0:24,0:24:23.99:0,24,259	0/0:23,0:23:38.52:0,39,445	0/0:28,0:29:23.89:0,24,345	0/1:3,13:16:18.60:225,0,19	1/1:7,19:26:63.20:973,63,0	0/1:7,28:34:0.54:495,0,1	0/1:5,10:15:15.59:271,0,16
chr10	56929767	.	CT	C	2571.30	PASS	AB=0.775;AC=19;AF=0.339;AN=56;BaseQRankSum=6.043;DP=604;FS=6.579;HRun=10;HaplotypeScore=80.2255;InbreedingCoeff=0.7580;MQ=63.74;MQ0=3;MQRankSum=1.309;QD=11.18;ReadPosRankSum=5.500;VQSLOD=2.9120;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:37:84:0,84,869	0/0:11,0:10:24.06:0,24,265	0/1:17,2:11:30.78:31,0,125	0/1:6,1:4:16.75:20,0,17	0/0:24,0:24:53.69:0,54,547	1/1:3,21:24:38.97:337,39,0	1/1:21,10:29:61.32:536,61,0	0/0:40,0:40:89.97:0,90,900	0/0:19,0:19:45.08:0,45,480	0/0:24,0:24:35.41:0,35,520	0/0:14,0:14:33.02:0,33,335	1/1:13,2:15:3.03:47,3,0	0/0:22,0:22:38.96:0,39,380	0/0:11,0:11:17.50:0,17,151	0/0:20,0:20:54.07:0,54,561	1/1:1,18:19:29.99:260,30,0	1/1:4,39:41:69.06:688,69,0	0/1:4,20:23:2.97:155,0,3	0/0:23,0:23:50.42:0,50,504	0/0:20,0:20:41.94:0,42,435	0/0:16,0:16:32.53:0,33,327	1/1:4,9:13:14:109,14,0	1/1:1,12:13:26.86:230,27,0	1/1:4,18:21:41.89:363,42,0	0/0:20,0:20:39.01:0,39,385	0/0:34,0:34:72.09:0,72,775	0/0:32,0:31:68.87:0,69,703	0/0:7,0:7:21.02:0,21,220
chr10	56930604	.	TACAC	T	1096.22	PASS	AB=0.960;AC=19;AF=0.365;AN=52;BaseQRankSum=2.961;DP=637;FS=17.936;HRun=0;HaplotypeScore=182.4965;InbreedingCoeff=-0.1067;MQ=61.17;MQ0=10;MQRankSum=-0.280;QD=3.13;ReadPosRankSum=0.419;VQSLOD=1.3920;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:46,0:44:24.99:25,0,75	0/0:6,0:6:3:0,3,27	./.	./.	0/1:10,0:12:4.87:36,0,5	1/1:19,1:20:17.63:161,18,0	0/1:31,3:34:9.19:231,0,9	0/0:27,0:27:5.64:0,6,27	0/1:23,0:23:35.16:39,0,35	0/0:14,0:13:5.97:0,6,37	0/0:13,0:12:1.50:0,1,21	0/1:23,0:27:99:104,0,144	0/0:19,0:20:23.43:0,23,294	0/0:26,0:26:28.78:0,29,362	0/1:25,0:25:51.47:51,0,92	1/1:22,1:24:24.52:287,25,0	0/1:21,1:22:13.36:95,0,13	0/1:15,1:15:4.25:69,0,4	0/1:23,0:23:10.58:11,0,59	0/1:18,0:18:25.94:26,0,37	0/0:51,0:48:6.98:0,7,50	0/1:19,0:19:36.44:36,0,50	0/1:15,0:16:0.02:0,0,0	0/0:33,0:34:24.28:0,24,176	0/1:18,0:18:30.06:70,0,30	0/0:27,0:26:3.57:0,4,58	0/0:17,0:17:6.45:0,6,48	1/1:6,0:5:1:3,1,0
chr10	56930648	.	CACACAT	C	4985.90	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=5.390;DP=694;FS=7.563;HRun=0;HaplotypeScore=178.6433;InbreedingCoeff=0.6444;MQ=54.77;MQ0=29;MQRankSum=-2.191;QD=12.85;ReadPosRankSum=-1.690;VQSLOD=3.1618;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:48:13.38:0,13,671	1/1:9,0:9:14.98:123,15,0	0/0:23,0:10:29.98:0,30,274	0/0:29,0:16:34.13:0,34,359	0/0:21,0:20:20.72:0,21,289	0/1:16,0:16:42.59:43,0,194	0/0:34,0:34:51.53:0,52,422	1/1:24,0:21:37.51:403,38,0	1/1:18,2:20:36.44:397,36,0	1/1:21,0:20:50.48:435,50,0	1/1:14,0:13:26.96:221,27,0	0/1:43,0:43:18.22:18,0,619	0/0:24,0:24:44.47:0,44,717	0/0:34,0:33:63.83:0,64,855	1/1:27,1:27:35:507,35,0	0/1:28,0:27:43.89:44,0,395	0/0:25,0:25:31.95:0,32,334	0/0:18,0:17:22.51:0,23,306	1/1:22,1:22:33.26:396,33,0	1/1:18,0:18:41.53:414,42,0	1/1:52,0:48:84.99:695,85,0	0/1:22,0:21:18.63:19,0,318	0/0:18,0:18:38.84:0,39,320	0/0:31,0:30:33.35:0,33,285	1/1:14,2:16:30.01:412,30,0	1/1:35,0:33:71.74:631,72,0	0/1:12,0:12:8.65:84,0,9	1/1:7,0:6:16.22:145,16,0
chr10	56931344	.	CGT	C	553.59	PASS	AB=0.990;AC=15;AF=0.278;AN=54;BaseQRankSum=3.232;DP=472;FS=0.760;HRun=0;HaplotypeScore=85.1887;InbreedingCoeff=0.3864;MQ=71.13;MQ0=18;MQRankSum=0.251;QD=3.44;ReadPosRankSum=-2.294;VQSLOD=1.1470;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:30:36.03:0,36,482	1/1:1,5:6:9.03:102,9,0	0/1:37,0:26:4.17:4,0,202	0/0:40,0:22:28.24:0,28,256	0/0:15,0:15:24.08:0,24,354	1/1:4,0:10:2.84:14,3,0	0/1:20,0:20:0.11:0,0,0	1/1:8,14:22:42.10:468,42,0	0/0:18,0:17:29.68:0,30,293	0/0:11,0:11:24.01:0,24,276	0/0:12,0:12:1.79:0,2,172	0/0:4,0:9:0:0,0,0	0/0:6,0:5:11.93:0,12,151	0/1:13,0:13:37.92:38,0,344	0/0:15,0:15:21.94:0,22,196	1/1:2,0:6:2.69:13,3,0	0/0:17,0:17:2.49:0,2,21	0/0:9,0:6:0.47:0,0,1	0/0:14,0:13:11.16:0,11,148	0/0:18,0:17:26.51:0,27,363	0/0:22,0:19:14.86:0,15,173	./.	1/1:14,0:12:3.58:9,4,0	0/0:23,0:27:3.48:0,3,37	0/1:13,0:13:13.84:14,0,50	0/0:28,0:27:51.35:0,51,681	0/1:18,1:18:37.73:38,0,222	0/0:6,0:6:15.04:0,15,188
chr10	56931367	.	ATGTGTGTG	A	1153.86	PASS	AB=0.975;AC=21;AF=0.477;AN=44;BaseQRankSum=0.214;DP=471;FS=6.194;HRun=0;HaplotypeScore=106.4007;InbreedingCoeff=0.3485;MQ=42.83;MQ0=62;MQRankSum=-0.725;QD=5.55;ReadPosRankSum=2.654;VQSLOD=1.5057;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:25:9.03:0,9,237	1/1:7,0:6:6.02:83,6,0	./.	./.	0/0:18,0:17:7.56:0,8,117	1/1:11,0:7:3.01:55,3,0	./.	0/0:23,0:22:8.94:0,9,73	1/1:23,0:18:11.78:297,12,0	0/1:16,0:15:13.67:72,0,14	1/1:16,0:14:3.01:73,3,0	0/0:7,0:5:0.47:0,0,1	0/0:15,0:12:8.60:0,9,109	0/0:21,0:19:12.86:0,13,250	1/1:18,0:14:9.50:214,10,0	1/1:8,0:6:2.63:54,3,0	0/1:19,0:12:12.22:25,0,12	./.	0/0:16,0:13:1.25:0,1,3	1/1:17,5:21:1.36:2,1,0	1/1:22,0:16:3.01:66,3,0	./.	./.	0/0:29,0:22:0:0,0,0	0/0:6,0:8:0:0,0,0	0/1:23,2:23:10.41:104,0,10	1/1:18,1:17:14.21:241,14,0	0/0:8,0:6:0.47:0,0,1
chr10	56931410	.	TGA	T	1047.74	PASS	AB=1.000;AC=21;AF=0.389;AN=54;BaseQRankSum=-6.212;DP=469;FS=5.753;HRun=0;HaplotypeScore=95.1673;InbreedingCoeff=0.5096;MQ=37.83;MQ0=65;MQRankSum=4.249;QD=4.05;ReadPosRankSum=-0.794;VQSLOD=1.6462;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:31,0:23:8.93:70,9,0	1/1:10,0:8:2.99:25,3,0	./.	0/1:8,0:3:10.07:13,0,10	1/1:16,0:15:17.89:138,18,0	1/1:25,0:23:29.12:226,29,0	1/1:30,0:25:26.06:206,26,0	0/0:18,0:16:10.23:0,10,81	0/0:23,0:17:11.47:0,11,91	0/0:15,0:13:20.86:0,21,152	0/0:12,0:10:2.96:0,3,19	1/1:14,0:12:14.50:106,15,0	0/1:9,0:6:0:0,0,0	0/1:15,0:13:9.39:9,0,99	0/0:22,0:17:9:0,9,78	0/0:13,0:11:14.99:0,15,128	0/0:26,0:20:1.86:0,2,128	0/0:15,0:7:17.86:0,18,130	0/0:12,0:9:17.90:0,18,136	0/0:16,0:13:6:0,6,51	0/1:20,0:16:15.01:15,0,15	1/1:21,0:20:11.95:91,12,0	0/0:4,7:9:0:0,0,0	1/1:43,0:36:41.69:319,42,0	0/0:8,0:8:9:0,9,77	0/1:16,0:13:5.96:6,0,142	0/0:11,0:9:12.83:0,13,94	0/0:7,0:2:1.25:0,1,3
chr10	56932340	.	AGCGGG	A	3865.96	PASS	AB=0.926;AC=33;AF=0.589;AN=56;BaseQRankSum=7.400;DP=434;FS=29.583;HRun=0;HaplotypeScore=121.9114;InbreedingCoeff=0.3061;MQ=63.73;MQ0=3;MQRankSum=-7.921;QD=13.96;ReadPosRankSum=10.150;VQSLOD=0.9745;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:14:16.25:0,16,154	0/0:7,0:7:20.81:0,21,224	0/0:40,0:23:47.36:0,47,518	0/0:56,0:25:34.33:0,34,602	0/0:8,0:8:5.96:0,6,45	1/1:17,0:16:34.80:198,35,0	0/1:17,0:17:51.32:166,0,51	0/0:18,0:17:29.04:0,29,238	1/1:0,6:8:12.04:201,12,0	1/1:0,3:3:6.02:126,6,0	1/1:2,3:5:3.01:39,3,0	0/1:21,0:21:9.71:204,0,10	0/1:4,0:4:0:0,0,0	0/0:7,0:7:10.17:0,10,117	1/1:2,6:8:24.07:431,24,0	0/1:20,0:20:20.61:197,0,21	1/1:24,0:23:16.52:296,17,0	0/1:22,0:22:95.01:101,0,95	0/1:3,0:4:10.97:65,0,11	0/1:1,6:7:6.14:67,0,6	1/1:1,6:7:6.36:39,6,0	1/1:19,0:19:23.89:261,24,0	0/1:24,0:24:55.64:158,0,56	0/1:31,0:31:30.17:163,0,30	1/1:3,5:9:17.80:372,18,0	1/1:6,2:10:18.89:292,19,0	1/1:0,0:11:27.98:425,28,0	1/1:2,4:6:2.92:65,3,0
chr10	56932342	.	CGGGGGG	C	7736.31	PASS	AB=0.956;AC=31;AF=0.554;AN=56;BaseQRankSum=-0.637;DP=449;FS=23.954;HRun=14;HaplotypeScore=117.9739;InbreedingCoeff=0.2630;MQ=64.53;MQ0=5;MQRankSum=-5.762;QD=27.05;ReadPosRankSum=9.778;VQSLOD=0.7147;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:13:4.39:0,4,84	0/0:3,0:7:18.01:0,18,216	0/0:43,0:22:43.96:0,44,622	0/0:61,0:26:21.16:0,21,693	0/0:4,0:4:3.01:0,3,52	1/1:2,15:16:36.12:681,36,0	0/1:6,11:18:4.17:588,0,4	0/0:10,0:15:20.93:0,21,181	1/1:8,0:8:11.21:113,11,0	0/1:6,0:6:27.88:28,0,136	1/1:5,0:5:2.82:37,3,0	1/1:5,16:21:28.56:781,29,0	0/0:4,0:4:3.01:0,3,39	0/0:7,0:7:9.03:0,9,193	0/1:10,0:10:77.14:138,0,77	1/1:7,15:22:39.93:769,40,0	1/1:5,19:23:54.06:1025,54,0	1/1:8,13:21:30.03:569,30,0	0/1:4,0:4:39.28:39,0,60	0/1:8,0:8:26.58:27,0,73	0/1:8,0:8:12.41:12,0,22	1/1:2,18:20:51.09:884,51,0	1/1:5,19:24:38.92:681,39,0	1/1:8,23:31:34.06:672,34,0	0/1:8,0:8:20.76:102,0,21	0/1:13,0:13:99:117,0,144	1/1:12,0:12:23.45:457,23,0	0/1:6,0:6:15.86:16,0,32
chr10	56933207	.	A	AT	6656.47	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-13.199;DP=499;FS=1.581;HRun=8;HaplotypeScore=45.4307;InbreedingCoeff=0.9744;MQ=72.12;MQ0=0;MQRankSum=-1.413;QD=28.57;ReadPosRankSum=3.036;VQSLOD=5.0593;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:50.98:0,51,457	0/0:9,0:9:24.01:0,24,220	0/0:9,0:9:20.94:0,21,182	0/0:11,0:11:12.08:0,12,203	0/0:28,0:28:72.02:0,72,655	0/0:17,0:17:48.02:0,48,436	0/0:8,0:8:21.01:0,21,192	0/0:34,0:34:90.04:0,90,821	1/1:3,14:17:33.10:381,33,0	1/1:1,18:19:54.15:613,54,0	1/1:1,23:24:69.10:764,69,0	0/0:13,0:13:33:0,33,298	0/0:16,0:16:48.01:0,48,434	0/0:19,0:19:51.02:0,51,467	1/1:4,19:23:57.17:658,57,0	0/0:15,0:15:36.02:0,36,329	0/0:24,0:24:57:0,57,516	0/0:13,0:13:35.97:0,36,317	1/1:5,17:22:54.16:622,54,0	1/1:3,24:27:69.20:795,69,0	1/1:3,6:9:18.05:208,18,0	0/0:4,0:4:6:0,6,55	0/0:17,0:17:45.02:0,45,412	0/0:7,0:7:18.01:0,18,165	1/1:2,17:18:42.12:484,42,0	1/1:3,26:29:78.20:878,78,0	1/1:1,26:27:72.21:831,72,0	1/1:4,13:17:14.77:423,15,0
chr10	56934153	.	TC	T	11580.35	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=18.795;DP=716;FS=0.000;HRun=3;HaplotypeScore=91.6276;InbreedingCoeff=0.9999;MQ=80.74;MQ0=0;MQRankSum=-1.321;QD=35.20;ReadPosRankSum=2.444;VQSLOD=5.1894;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,147,2080	1/1:0,9:9:27.08:335,27,0	0/0:19,0:19:47.92:0,48,705	0/0:19,0:19:53.81:0,54,713	0/0:27,0:27:81.27:0,81,1165	0/0:23,0:23:66.22:0,66,950	0/0:32,0:32:90.29:0,90,1278	1/1:3,18:21:54.15:644,54,0	1/1:0,31:31:90.28:1116,90,0	1/1:1,35:36:99:1301,105,0	1/1:0,21:21:60.19:744,60,0	0/0:26,0:26:78.26:0,78,1123	0/0:24,0:24:69.22:0,69,975	0/0:16,0:16:48.16:0,48,690	1/1:1,32:33:56.23:1147,56,0	0/0:23,0:23:63.20:0,63,888	0/0:29,0:29:84.28:0,84,1200	0/0:18,0:18:51.17:0,51,733	1/1:1,15:16:45.08:507,45,0	1/1:0,26:26:78.25:967,78,0	1/1:0,30:30:84.26:1041,84,0	0/0:29,0:29:87.29:0,87,1246	0/0:25,0:25:63.21:0,63,898	0/0:26,0:26:75.14:0,75,1024	1/1:1,24:25:72.23:892,72,0	1/1:0,35:35:99:1287,105,0	1/1:0,22:22:63.20:781,63,0	1/1:0,24:24:66.21:818,66,0
chr10	56934352	.	ATGT	A	20102.24	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=12.127;DP=670;FS=6.978;HRun=0;HaplotypeScore=111.3274;InbreedingCoeff=0.9989;MQ=88.88;MQ0=0;MQRankSum=-4.386;QD=40.61;ReadPosRankSum=4.155;VQSLOD=5.8660;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,144,3282	1/1:0,11:11:27.09:460,27,0	0/0:27,0:27:75.70:0,76,1558	0/0:26,0:26:75.25:0,75,1660	0/0:33,0:33:96.32:0,96,2143	1/1:0,22:22:50.83:869,51,0	1/1:1,31:32:72.20:1196,72,0	1/1:0,26:26:75.23:1219,75,0	1/1:0,26:26:69.24:1176,69,0	1/1:1,22:23:60.20:1012,60,0	1/1:0,17:17:36.12:613,36,0	1/1:1,18:19:48.16:819,48,0	0/0:19,0:19:57.20:0,57,1251	0/0:22,0:22:66.23:0,66,1505	1/1:1,24:25:60.21:1023,60,0	1/1:0,14:14:36.12:613,36,0	1/1:0,27:27:72.25:1228,72,0	1/1:0,15:15:39.13:665,39,0	1/1:1,22:23:66.19:1060,66,0	1/1:0,19:19:51.17:870,51,0	1/1:2,48:50:93.90:1633,94,0	1/1:0,17:17:36.12:614,36,0	1/1:2,23:25:54.18:921,54,0	1/1:2,27:29:63.22:1074,63,0	1/1:1,12:13:21.07:358,21,0	1/1:2,22:24:66.20:1097,66,0	1/1:2,19:21:51.17:865,51,0	1/1:0,17:17:42.14:715,42,0
chr10	56935598	.	CT	C	3190.32	PASS	AB=0.941;AC=19;AF=0.339;AN=56;BaseQRankSum=12.437;DP=517;FS=0.000;HRun=10;HaplotypeScore=66.9665;InbreedingCoeff=0.8827;MQ=74.37;MQ0=0;MQRankSum=-0.727;QD=19.45;ReadPosRankSum=3.649;VQSLOD=4.4134;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:60.01:0,60,629	0/0:13,0:13:24.05:0,24,257	0/1:15,1:15:31.44:31,0,50	0/0:17,0:15:1.71:0,2,149	0/0:25,0:25:72.19:0,72,789	1/1:1,17:18:44.99:391,45,0	1/1:3,8:11:20.99:182,21,0	0/0:17,0:17:39.01:0,39,397	0/0:26,0:26:72.19:0,72,796	0/0:28,0:29:78.04:0,78,844	0/0:19,0:19:47.89:0,48,528	1/1:1,21:22:59.98:521,60,0	0/0:10,0:10:15.04:0,15,166	0/0:22,0:22:60.12:0,60,644	0/0:15,1:16:16.04:0,16,397	1/1:0,10:10:29.99:260,30,0	1/1:0,17:17:47.99:417,48,0	1/1:2,16:18:47.03:397,47,0	0/0:20,0:20:51.13:0,51,560	0/0:30,0:30:78.20:0,78,855	0/0:16,0:17:38.92:0,39,404	1/1:1,16:18:47.02:397,47,0	1/1:2,17:19:50.99:443,51,0	1/1:1,14:15:41.98:365,42,0	0/0:22,0:22:60.16:0,60,657	0/0:23,0:23:66.03:0,66,704	0/0:14,1:15:19.09:0,19,434	0/0:7,0:8:20.89:0,21,213
chr10	56935899	.	ATTG	A	5966.53	PASS	AB=0.594;AC=17;AF=0.304;AN=56;BaseQRankSum=13.266;DP=636;FS=0.771;HRun=0;HaplotypeScore=83.6133;InbreedingCoeff=0.8952;MQ=53.24;MQ0=27;MQRankSum=-0.891;QD=32.78;ReadPosRankSum=1.107;VQSLOD=5.2263;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,153,3197	0/0:8,0:8:21.07:0,21,463	0/0:30,0:6:15.05:0,15,320	0/0:27,0:4:12.04:0,12,254	0/0:25,0:25:72.25:0,72,1560	1/1:2,20:22:51.17:819,51,0	1/1:1,16:17:33.11:530,33,0	0/0:22,0:20:57.16:0,57,1183	0/0:20,0:20:57.18:0,57,1216	0/0:22,0:22:60.20:0,60,1274	0/0:16,0:16:42.14:0,42,922	1/1:0,12:12:36.12:577,36,0	0/0:10,0:10:30.10:0,30,609	0/0:22,0:22:60.21:0,60,1305	0/0:26,0:26:75.26:0,75,1653	1/1:2,17:18:39.13:627,39,0	1/1:5,35:40:9.20:1059,9,0	1/1:2,12:14:23.14:605,23,0	0/0:26,0:18:48.12:0,48,1000	0/0:21,0:21:57.20:0,57,1259	0/0:49,0:49:99:0,132,2781	1/1:0,16:16:36.12:578,36,0	1/1:1,22:23:48.16:771,48,0	0/1:6,13:19:36.98:400,0,37	0/0:18,0:18:51.10:0,51,997	0/0:23,0:23:66.23:0,66,1439	0/0:28,0:28:78.27:0,78,1721	0/0:6,0:6:15.03:0,15,289
chr10	56938557	.	G	GAA	2784.51	PASS	AB=0.673;AC=22;AF=0.393;AN=56;BaseQRankSum=5.227;DP=456;FS=5.155;HRun=12;HaplotypeScore=77.7089;InbreedingCoeff=0.6269;MQ=62.87;MQ0=11;MQRankSum=-3.826;QD=14.58;ReadPosRankSum=-3.282;VQSLOD=1.9499;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:25:64.89:0,65,542	1/1:3,4:7:11.94:124,12,0	0/0:29,0:14:22.91:0,23,160	0/0:29,0:10:7.72:0,8,60	0/0:18,0:20:50.47:0,50,434	0/0:10,0:15:28.18:0,28,231	0/1:12,0:11:1.85:2,0,145	1/1:7,8:18:33.79:322,34,0	1/1:2,10:11:9.03:126,9,0	1/1:6,15:21:35.59:452,36,0	1/1:8,8:21:31.56:337,32,0	0/0:10,0:11:17.80:0,18,201	0/0:7,0:8:17.70:0,18,145	0/0:16,0:16:20.88:0,21,193	0/1:2,9:12:1.09:277,0,1	0/0:13,0:13:26.97:0,27,250	0/0:21,0:23:56.38:0,56,488	0/0:30,0:29:68.97:0,69,632	1/1:7,2:10:9.13:143,9,0	1/1:3,7:10:15:184,15,0	0/1:2,5:9:21.75:36,0,22	0/0:12,0:13:29.75:0,30,261	0/0:18,0:20:22.46:0,22,357	0/0:12,0:12:23.98:0,24,222	0/1:5,7:12:3.67:266,0,4	1/1:9,4:15:31.90:346,32,0	0/1:4,10:18:4.72:200,0,5	0/1:7,4:11:9.74:169,0,10
chr10	56939129	.	TTCTATGTA	T	1426.42	PASS	AB=1.000;AC=16;AF=0.286;AN=56;BaseQRankSum=8.556;DP=539;FS=2.477;HRun=0;HaplotypeScore=146.3866;InbreedingCoeff=0.8147;MQ=51.65;MQ0=6;MQRankSum=-6.635;QD=10.81;ReadPosRankSum=-5.094;VQSLOD=1.0555;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:75.16:0,75,1809	0/0:9,0:7:15.05:0,15,321	0/0:18,0:6:6:0,6,72	0/0:10,0:3:5.98:0,6,56	0/0:32,0:32:84.19:0,84,2095	1/1:23,0:23:26.50:180,27,0	1/1:19,0:19:11.83:76,12,0	0/0:42,0:42:92.07:0,92,1831	0/0:15,0:15:24.06:0,24,576	0/0:23,0:23:57.11:0,57,1546	0/0:27,0:27:62.99:0,63,1507	1/1:20,0:20:45.27:375,45,0	0/0:17,0:17:51.17:0,51,1385	0/0:12,0:12:30.07:0,30,888	0/0:34,0:34:71.65:0,72,1538	0/1:18,0:18:23.37:66,0,23	1/1:1,12:13:6.02:86,6,0	1/1:12,0:12:26.83:410,27,0	0/0:17,0:16:32:0,32,842	0/0:31,0:30:36.82:0,37,1133	0/0:9,0:9:18.03:0,18,384	1/1:6,0:6:11.91:110,12,0	1/1:11,0:11:23.73:313,24,0	0/1:10,0:10:0:0,0,0	0/0:22,0:22:21.79:0,22,440	0/0:21,0:20:44.95:0,45,1098	0/0:27,0:27:53.92:0,54,1114	0/0:10,0:10:30.04:0,30,525
chr10	56939139	.	CTATG	C	1483.27	PASS	AB=0.796;AC=17;AF=0.304;AN=56;BaseQRankSum=9.331;DP=534;FS=2.914;HRun=0;HaplotypeScore=118.8735;InbreedingCoeff=0.7067;MQ=48.28;MQ0=17;MQRankSum=-6.167;QD=10.52;ReadPosRankSum=-5.395;VQSLOD=1.3496;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:77.50:0,77,1555	0/0:10,0:8:18.52:0,19,326	0/0:22,0:3:6:0,6,101	0/0:13,0:3:5.35:0,5,29	0/0:29,0:28:84.17:0,84,1747	1/1:1,18:19:26.97:395,27,0	1/1:1,16:17:2.96:51,3,0	0/0:50,0:49:60.60:0,61,1949	0/0:15,0:15:22.93:0,23,506	0/0:23,0:23:48.99:0,49,1199	0/0:27,0:27:63.17:0,63,1298	1/1:7,13:20:50.61:540,51,0	0/0:18,0:18:54.17:0,54,1227	0/0:11,0:11:33.07:0,33,685	0/0:34,0:34:14.15:0,14,1325	0/1:15,3:18:56.43:156,0,56	1/1:13,0:13:5.92:39,6,0	1/1:10,0:10:26.53:181,27,0	0/1:17,0:15:5.28:5,0,693	0/0:26,0:25:36.60:0,37,923	0/0:10,0:10:17.96:0,18,335	1/1:0,7:7:11.76:103,12,0	1/1:8,3:11:26.59:197,27,0	0/1:1,8:9:0.03:0,0,0	0/0:20,0:20:5.20:0,5,379	0/0:19,0:18:18.32:0,18,889	0/0:26,0:26:42.08:0,42,902	0/0:10,0:10:30:0,30,472
chr10	56939151	.	C	CTATT	1594.54	PASS	AB=0.969;AC=21;AF=0.375;AN=56;BaseQRankSum=11.230;DP=568;FS=12.523;HRun=0;HaplotypeScore=136.3028;InbreedingCoeff=0.1890;MQ=46.49;MQ0=21;MQRankSum=-7.255;QD=5.91;ReadPosRankSum=-4.387;VQSLOD=0.3872;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:84.59:0,85,1224	0/0:12,0:10:25.27:0,25,292	0/0:24,0:3:3.01:0,3,57	0/0:16,0:2:2.84:0,3,56	0/0:26,0:25:69.01:0,69,1216	1/1:20,0:20:10.41:81,10,0	1/1:17,0:17:8.05:29,8,0	0/0:51,0:50:95.40:0,95,1656	0/0:14,0:14:32.32:0,32,384	0/1:25,0:25:99:410,0,731	0/0:28,0:28:53.21:0,53,885	1/1:23,0:23:9.77:154,10,0	0/0:19,0:19:57.16:0,57,976	0/0:12,0:12:33.07:0,33,529	0/0:36,0:36:64.64:0,65,1100	0/1:20,0:20:18.12:28,0,18	0/1:16,0:16:16.80:19,0,17	0/1:11,0:11:40.62:203,0,41	0/1:20,0:16:83.55:84,0,448	0/1:16,10:25:8.25:8,0,607	0/1:12,0:12:34.08:34,0,195	1/1:8,0:8:4.50:47,5,0	1/1:11,0:11:17.79:132,18,0	1/1:9,0:9:0.29:1,0,0	0/0:18,0:18:45.31:0,45,446	0/1:24,0:23:99:350,0,586	0/1:28,0:28:99:190,0,513	0/0:8,0:7:21.04:0,21,320
chr10	56939159	.	CTATT	C	2150.84	PASS	AB=0.968;AC=21;AF=0.375;AN=56;BaseQRankSum=7.549;DP=576;FS=1.322;HRun=0;HaplotypeScore=135.0880;InbreedingCoeff=-0.0805;MQ=45.99;MQ0=22;MQRankSum=-4.648;QD=6.52;ReadPosRankSum=-0.492;VQSLOD=2.6671;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:65.86:0,66,1229	0/1:14,0:12:41.58:42,0,96	0/0:31,0:5:5.18:0,5,81	0/0:17,0:2:2.97:0,3,20	0/0:23,0:23:63.12:0,63,1097	1/1:17,0:17:13.50:381,13,0	0/1:19,0:19:43.63:93,0,44	0/1:53,0:52:99:173,0,691	0/1:16,0:16:99:145,0,220	0/0:27,0:27:29:0,29,744	0/0:28,0:28:54.72:0,55,586	1/1:20,2:22:13.61:447,14,0	0/0:20,0:20:54.07:0,54,957	0/0:11,0:11:33.09:0,33,701	0/1:36,0:36:99:216,0,515	0/1:6,15:21:32.68:213,0,33	0/1:15,0:15:9:9,0,103	0/1:13,0:13:69.86:70,0,113	0/1:21,0:17:27.91:28,0,438	0/1:24,0:23:84.54:85,0,326	0/1:12,0:12:26.81:27,0,141	0/1:8,0:8:6.37:60,0,6	1/1:9,1:10:5.59:127,6,0	1/1:10,0:10:0.77:14,1,0	0/1:19,0:19:99:192,0,132	0/0:25,0:24:7.51:0,8,402	0/0:26,0:26:30:0,30,397	0/0:6,0:5:14.97:0,15,126
chr10	56939163	.	T	TTATCTATCTATC	5068.22	PASS	AB=0.875;AC=33;AF=0.635;AN=52;BaseQRankSum=2.180;DP=591;FS=1.217;HRun=0;HaplotypeScore=200.7300;InbreedingCoeff=0.5682;MQ=46.89;MQ0=22;MQRankSum=-3.369;QD=11.87;ReadPosRankSum=-2.384;VQSLOD=3.5913;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:43.45:0,43,1282	1/1:13,0:11:10.81:79,11,0	0/0:31,0:6:5.20:0,5,73	./.	0/0:22,0:22:27.09:0,27,854	0/1:17,0:17:26.49:82,0,26	1/1:19,0:19:14.68:98,15,0	1/1:49,0:48:52.84:346,53,0	1/1:16,0:16:22.02:229,22,0	1/1:16,13:32:47.72:1116,48,0	0/1:19,9:30:0:0,0,0	0/1:23,0:24:20.49:125,0,20	0/0:18,0:18:33.08:0,33,850	0/0:13,0:13:36.07:0,36,722	1/1:38,0:38:23.86:356,24,0	1/1:20,0:22:24.72:176,25,0	0/0:16,0:16:17.94:0,18,171	0/0:12,0:12:15.04:0,15,210	1/1:23,0:20:14.87:284,15,0	1/1:24,0:23:17.96:182,18,0	1/1:12,0:12:10.43:117,10,0	1/1:9,0:9:8.01:45,8,0	0/1:11,0:11:6.99:96,0,7	1/1:9,0:9:2.37:16,2,0	1/1:20,0:20:12.01:167,12,0	1/1:13,15:28:45.14:966,45,0	0/1:16,11:30:56.27:589,0,56	./.
chr10	56939876	.	AT	A	1399.18	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.777;DP=624;FS=8.547;HRun=1;HaplotypeScore=64.4414;InbreedingCoeff=0.9977;MQ=86.97;MQ0=0;MQRankSum=-1.643;QD=32.54;ReadPosRankSum=-2.737;VQSLOD=1.8010;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,123,1912	1/1:0,9:9:21.07:272,21,0	0/0:26,0:26:78.24:0,78,1215	0/0:17,0:17:45.15:0,45,715	0/0:16,0:16:48.16:0,48,767	0/0:31,0:31:93.32:0,93,1481	0/0:26,0:26:75.24:0,75,1165	1/1:0,34:34:99:1248,99,0	0/0:23,0:23:69.20:0,69,1076	0/0:23,0:23:69.24:0,69,1103	0/0:17,0:17:51.16:0,51,787	0/0:21,0:21:63.21:0,63,1007	0/0:11,0:11:33.11:0,33,528	0/0:15,0:15:45.15:0,45,719	0/0:21,0:21:63.21:0,63,1007	0/0:19,0:19:57.19:0,57,911	0/0:44,0:43:99:0,132,2079	0/0:17,0:17:51.13:0,51,768	0/0:29,0:29:84.28:0,84,1322	0/0:15,0:15:45.14:0,45,696	0/0:25,0:25:75.23:0,75,1173	0/0:22,0:22:66.19:0,66,1007	0/0:15,0:15:42.14:0,42,671	0/0:24,0:24:72.25:0,72,1148	0/0:19,0:19:57.19:0,57,910	0/0:18,0:18:54.17:0,54,841	0/0:28,0:28:81.28:0,81,1292	0/0:17,0:17:51.17:0,51,809
chr10	56941169	.	TTGTGTGTG	T	4435.53	PASS	AB=0.700;AC=17;AF=0.315;AN=54;BaseQRankSum=8.950;DP=615;FS=22.186;HRun=0;HaplotypeScore=176.5728;InbreedingCoeff=0.7299;MQ=63.67;MQ0=7;MQRankSum=-7.927;QD=24.11;ReadPosRankSum=-0.683;VQSLOD=2.8275;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:39:70.61:0,71,2769	0/0:12,0:12:12.04:0,12,428	./.	0/0:23,0:17:8.97:0,9,132	0/0:20,0:25:39.13:0,39,1346	0/0:26,0:29:63.20:0,63,2365	0/0:22,0:28:57.18:0,57,2083	0/0:30,0:30:59.38:0,59,1687	1/1:2,11:13:18.06:459,18,0	1/1:9,14:23:21.14:853,21,0	0/1:2,10:12:0:0,0,0	0/0:18,0:18:45.11:0,45,1610	0/0:10,0:12:24.08:0,24,928	0/0:16,0:17:42.14:0,42,1580	1/1:11,11:22:12.04:306,12,0	0/0:16,0:17:30.09:0,30,1084	0/0:32,0:34:60.70:0,61,2724	0/0:15,0:19:42.13:0,42,1434	0/1:11,7:18:52.64:362,0,53	1/1:10,13:23:5.98:96,6,0	0/0:17,2:20:3.01:0,3,59	0/0:23,0:25:54.17:0,54,1943	0/0:15,0:15:27.09:0,27,1021	0/0:44,0:48:99:0,117,4185	1/1:8,11:20:15.05:383,15,0	1/1:9,15:25:51.13:1161,51,0	1/1:7,15:21:30.10:765,30,0	0/1:4,0:3:49.71:50,0,86
chr10	56941202	.	T	TGTGCGC	821.45	PASS	AB=1.000;AC=4;AF=0.071;AN=56;BaseQRankSum=-3.517;DP=641;FS=0.000;HRun=0;HaplotypeScore=180.6587;InbreedingCoeff=0.4912;MQ=57.05;MQ0=6;MQRankSum=-1.959;QD=16.76;ReadPosRankSum=-4.397;VQSLOD=2.3036;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:39:99:0,109,1843	1/1:1,6:9:9.03:327,9,0	0/1:16,0:5:0.10:0,0,67	0/0:21,0:7:0.82:0,1,98	0/0:24,0:24:63.20:0,63,1109	0/0:29,0:29:87.24:0,87,1599	0/0:32,0:32:83.74:0,84,1547	0/1:24,0:24:3.42:591,0,3	0/0:25,0:25:41.81:0,42,646	0/0:28,0:28:69.66:0,70,1145	0/0:16,0:15:12.04:0,12,176	0/0:25,0:25:71.87:0,72,1395	0/0:16,0:16:42.13:0,42,828	0/0:18,0:18:51.11:0,51,931	0/0:17,0:17:27.09:0,27,436	0/0:12,0:12:36.11:0,36,729	0/0:32,0:32:90.73:0,91,1841	0/0:24,0:24:45.23:0,45,1113	0/0:15,0:14:31.39:0,31,483	0/0:23,0:22:21.07:0,21,328	0/0:31,0:30:32.97:0,33,477	0/0:25,0:24:66.12:0,66,1204	0/0:18,0:18:51.12:0,51,891	0/0:44,0:44:99:0,117,2391	0/0:21,0:21:39.13:0,39,638	0/0:28,0:28:81.10:0,81,1249	0/0:22,0:21:47.81:0,48,742	0/0:6,0:5:4:0,4,141
chr10	56941910	.	A	ATT	2098.03	PASS	AB=0.764;AC=39;AF=0.696;AN=56;BaseQRankSum=7.355;DP=587;FS=2.793;HRun=9;HaplotypeScore=122.4830;InbreedingCoeff=0.7837;MQ=72.03;MQ0=2;MQRankSum=-2.222;QD=5.01;ReadPosRankSum=2.573;VQSLOD=-0.2005;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:89:0,89,919	0/0:13,0:13:36.07:0,36,383	0/0:41,1:25:9.88:0,10,207	0/1:32,0:19:2.16:2,0,200	0/0:26,0:26:69.17:0,69,731	1/1:1,0:17:37.31:128,37,0	1/1:3,0:16:32.41:117,32,0	0/0:30,0:30:69.14:0,69,728	1/1:16,0:17:35.34:120,35,0	1/1:10,1:21:5.01:116,5,0	0/1:14,0:20:5.70:78,0,6	1/1:3,0:14:22.38:77,22,0	0/0:9,0:9:18.04:0,18,191	0/0:15,0:15:39.09:0,39,415	1/1:20,0:23:36.03:123,36,0	1/1:2,0:19:30.83:105,31,0	1/1:3,0:22:32.62:114,33,0	1/1:4,0:24:15.94:108,16,0	1/1:16,1:26:47.77:216,48,0	1/1:13,0:19:39.49:155,39,0	1/1:9,0:11:16.30:58,16,0	1/1:7,0:24:40:140,40,0	0/1:2,0:23:2.08:64,0,2	1/1:3,0:17:23.55:79,24,0	1/1:10,0:12:26.25:120,26,0	1/1:15,0:21:42.88:156,43,0	1/1:18,0:28:18.10:174,18,0	1/1:9,0:11:8.83:45,9,0
chr10	56941922	.	CT	C	3971.34	PASS	AB=0.955;AC=30;AF=0.536;AN=56;BaseQRankSum=5.183;DP=564;FS=19.325;HRun=11;HaplotypeScore=98.6755;InbreedingCoeff=0.7012;MQ=74.65;MQ0=2;MQRankSum=-1.731;QD=11.31;ReadPosRankSum=-0.123;VQSLOD=1.3521;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,2:32:47.54:0,48,710	1/1:0,13:14:34.98:277,35,0	0/1:39,1:23:16.36:16,0,118	0/1:30,0:18:36.02:36,0,74	0/1:21,2:23:4.18:4,0,364	0/0:18,0:18:14.74:0,15,359	0/0:13,1:15:14.25:0,14,304	1/1:7,19:26:56.90:465,57,0	1/1:14,1:15:28.91:218,29,0	1/1:14,5:20:8.61:247,9,0	1/1:14,5:19:42.21:323,42,0	0/0:16,0:16:38.92:0,39,398	0/0:7,0:7:15.02:0,15,152	0/0:12,1:13:5.43:0,5,263	1/1:16,5:20:41.65:321,42,0	0/0:18,0:19:32.68:0,33,332	0/0:16,0:18:41.77:0,42,399	0/0:24,0:26:51.28:0,51,488	1/1:14,9:23:47.50:358,47,0	1/1:15,4:19:12.47:285,12,0	1/1:7,2:9:14.97:122,15,0	0/0:24,0:25:38.35:0,38,568	0/0:24,0:24:47.85:0,48,495	0/1:17,1:18:11.43:11,0,255	1/1:9,3:12:29.88:237,30,0	1/1:20,5:25:53.82:431,54,0	1/1:17,7:24:54.31:411,54,0	1/1:9,1:11:26.84:208,27,0
chr10	56941991	.	T	TCTTCCTTCCTTCCTTCCTTC	14887.34	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=-3.223;DP=652;FS=2.287;HRun=0;HaplotypeScore=284.4568;InbreedingCoeff=0.8571;MQ=58.17;MQ0=2;MQRankSum=-8.200;QD=49.30;ReadPosRankSum=-3.727;VQSLOD=2.9102;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:58.36:0,58,2548	0/0:11,0:11:15.02:0,15,423	0/0:21,0:13:13.33:0,13,140	0/0:20,0:17:3.61:0,4,78	0/0:20,0:20:45.13:0,45,1537	0/0:20,0:20:54.17:0,54,2369	0/0:18,0:18:30.08:0,30,927	0/0:42,0:42:75.02:0,75,1097	1/1:3,11:25:6.02:505,6,0	1/1:7,22:35:69.67:3945,70,0	1/1:5,11:23:23.78:618,24,0	0/0:21,0:21:45.13:0,45,1795	0/0:19,0:19:51.16:0,51,2018	0/0:14,0:14:36.12:0,36,1428	1/1:4,21:33:15.05:1260,15,0	0/0:22,0:22:66.18:0,66,2361	0/0:19,0:19:45.08:0,45,1484	0/0:27,0:27:45.56:0,46,1400	1/1:27,0:27:45.07:820,45,0	1/1:18,0:18:36.10:1222,36,0	1/1:10,0:10:15:240,15,0	0/0:17,0:18:36.11:0,36,1034	0/0:29,0:29:56.99:0,57,2601	0/1:29,0:29:46.68:47,0,2345	1/1:17,0:17:39.10:937,39,0	1/1:6,18:36:87.23:4186,87,0	1/1:10,10:32:3.95:245,4,0	1/1:17,0:16:42.14:862,42,0
chr10	56942066	.	CGT	C	971.89	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=3.944;DP=569;FS=0.000;HRun=0;HaplotypeScore=80.4694;InbreedingCoeff=0.8753;MQ=84.83;MQ0=0;MQRankSum=-1.173;QD=37.38;ReadPosRankSum=-1.986;VQSLOD=4.9426;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,111,2117	1/1:0,8:8:18.06:275,18,0	0/0:24,0:23:66.18:0,66,1183	0/0:23,0:23:22.92:0,23,879	0/0:17,0:17:51.11:0,51,827	0/0:23,0:23:69.24:0,69,1319	0/0:16,0:16:45.15:0,45,856	1/1:0,18:18:54.18:816,54,0	0/0:19,0:19:42.14:0,42,808	0/0:21,0:21:60.21:0,60,1140	0/0:15,0:15:36.12:0,36,680	0/0:23,0:23:66.23:0,66,1241	0/0:15,0:15:45.15:0,45,859	0/0:21,0:21:63.20:0,63,1181	0/0:22,0:22:42.14:0,42,809	0/0:21,0:21:63.22:0,63,1216	0/0:25,0:25:75.26:0,75,1427	0/0:26,0:27:75.22:0,75,1411	0/0:17,0:17:48.14:0,48,853	0/0:18,0:18:51.16:0,51,939	0/0:32,0:32:96.31:0,96,1784	0/0:12,0:12:36.12:0,36,694	0/0:19,0:19:51.16:0,51,929	0/0:25,0:25:69.24:0,69,1332	0/0:13,0:13:0.26:0,0,656	0/0:29,0:29:81.27:0,81,1527	0/0:21,0:21:36.12:0,36,695	0/0:7,0:7:21.07:0,21,393
chr10	56942337	.	CGTGTGTGTGTGT	C	1101	PASS	AB=0.993;AC=16;AF=0.333;AN=48;BaseQRankSum=2.719;DP=654;FS=5.167;HRun=0;HaplotypeScore=206.3853;InbreedingCoeff=0.6346;MQ=65.98;MQ0=22;MQRankSum=-2.770;QD=5.59;ReadPosRankSum=1.653;VQSLOD=2.5383;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:31:43.95:0,44,1498	0/0:11,0:12:13.70:0,14,477	./.	./.	0/0:20,0:20:12.04:0,12,362	0/0:24,0:24:30.08:0,30,1442	0/0:33,0:31:27.98:0,28,1055	0/0:37,0:28:19.30:0,19,461	./.	0/1:16,0:16:48.09:48,0,83	1/1:8,1:9:3.01:54,3,0	0/0:21,0:21:18.06:0,18,783	0/0:10,0:10:15.94:0,16,680	0/0:12,0:11:3.01:0,3,175	1/1:17,2:20:14.24:323,14,0	0/0:22,0:23:31.34:0,31,1241	0/0:36,0:33:60.20:0,60,2584	0/0:18,0:17:21.04:0,21,703	1/1:29,1:26:3.01:103,3,0	1/1:9,1:9:3.36:92,3,0	0/1:66,1:65:3.94:61,0,4	0/0:24,0:24:33.09:0,33,1395	0/0:21,0:21:24.08:0,24,1066	0/0:36,0:35:40.67:0,41,1680	1/1:10,2:12:3:29,3,0	1/1:21,1:20:6.02:204,6,0	1/1:7,3:11:14.94:348,15,0	./.
chr10	56942372	.	GTGTGTGTGTGTA	G	867.67	PASS	AB=0.977;AC=12;AF=0.214;AN=56;BaseQRankSum=1.695;DP=543;FS=8.442;HRun=0;HaplotypeScore=176.4581;InbreedingCoeff=-0.1378;MQ=44.13;MQ0=25;MQRankSum=-1.802;QD=4.17;ReadPosRankSum=-1.256;VQSLOD=1.9951;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:34:27.09:0,27,1460	0/1:16,0:16:8.13:8,0,549	0/0:7,0:1:2.92:0,3,17	0/0:10,0:2:5.93:0,6,40	0/0:13,0:12:6.56:0,7,342	0/0:21,0:21:41.98:0,42,1561	0/0:31,0:27:43.20:0,43,1184	0/1:33,0:23:19.97:20,0,691	0/1:12,0:12:3.45:3,0,59	0/0:14,0:14:7.86:0,8,241	1/1:9,1:10:2.45:25,2,0	0/0:25,0:23:28:0,28,1009	0/0:13,0:12:29.81:0,30,794	0/0:10,0:9:13.32:0,13,335	0/1:16,1:17:56.27:256,0,56	0/0:16,0:16:19.56:0,20,1055	0/0:35,0:33:58.67:0,59,2756	0/0:12,0:12:30.08:0,30,1092	0/1:18,0:15:64.42:64,0,160	0/1:12,0:11:30.91:90,0,31	0/1:45,0:40:9.03:9,0,69	0/0:17,0:17:39.09:0,39,1325	0/0:22,0:22:42.04:0,42,1215	0/0:46,0:45:17.18:0,17,1751	0/1:12,0:12:11.76:12,0,26	0/1:15,1:15:54.41:223,0,54	0/1:14,1:14:63.46:299,0,63	0/0:5,0:4:8.66:0,9,56
chr10	56942384	.	AAGAG	A	2621.59	PASS	AB=0.877;AC=23;AF=0.411;AN=56;BaseQRankSum=-1.731;DP=499;FS=24.558;HRun=0;HaplotypeScore=118.2666;InbreedingCoeff=0.6910;MQ=46.94;MQ0=23;MQRankSum=1.796;QD=11.50;ReadPosRankSum=0.674;VQSLOD=1.5474;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:27,1:27:48.63:49,0,61	0/0:6,0:12:9.53:0,10,149	0/0:7,0:2:6.02:0,6,110	0/0:7,0:5:11.40:0,11,183	0/1:7,1:7:10.13:91,0,10	0/0:14,0:14:7.60:0,8,349	0/0:27,0:25:51.55:0,52,890	0/0:24,0:25:54.18:0,54,987	1/1:11,0:13:24.08:362,24,0	1/1:11,2:14:24.07:347,24,0	1/1:6,0:10:2.62:48,3,0	0/0:22,0:20:28.62:0,29,549	0/0:12,0:12:21:0,21,373	0/0:10,0:8:15.05:0,15,335	1/1:12,0:14:14.46:187,14,0	0/0:16,1:17:17.85:0,18,272	0/0:31,0:31:43.21:0,43,1040	0/0:13,0:12:27.01:0,27,547	1/1:17,3:18:33.10:483,33,0	1/1:12,1:12:8.36:139,8,0	1/1:14,33:43:11.47:192,11,0	0/0:15,0:15:24.04:0,24,453	0/0:18,0:18:33.11:0,33,761	0/0:38,0:37:46.82:0,47,721	1/1:9,4:13:11.95:165,12,0	1/1:10,9:19:14.08:349,14,0	1/1:15,3:17:20.67:329,21,0	0/1:4,1:4:35.79:88,0,36
chr10	56942468	.	G	GGTGT	3570.19	PASS	AB=0.843;AC=27;AF=0.540;AN=50;BaseQRankSum=-0.944;DP=880;FS=14.163;HRun=0;HaplotypeScore=156.3258;InbreedingCoeff=-0.1007;MQ=45.23;MQ0=94;MQRankSum=0.554;QD=5.94;ReadPosRankSum=1.307;VQSLOD=1.8317;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:35:24.04:0,24,303	./.	./.	./.	0/0:27,0:26:27.06:0,27,351	1/1:20,0:19:2.10:380,2,0	0/1:21,10:30:20.49:377,0,20	0/0:51,0:31:6.02:0,6,72	0/1:22,0:30:41.21:41,0,75	0/1:39,0:37:91.67:101,0,92	0/1:12,0:12:3:3,0,64	1/1:21,1:22:14.93:249,15,0	0/0:23,0:20:20.96:0,21,330	0/0:16,0:17:7.15:0,7,41	1/1:17,8:21:5.49:82,5,0	0/1:11,4:16:32.09:270,0,32	0/1:17,18:38:9.41:573,0,9	1/1:11,6:18:14.37:235,14,0	0/1:29,0:15:41.10:65,0,41	0/1:19,0:22:41.78:42,0,48	0/1:78,0:73:95.41:95,0,344	0/1:22,4:27:79.17:198,0,79	1/1:16,6:22:8.49:155,8,0	1/1:17,14:34:29.31:510,29,0	1/1:13,0:15:5.49:25,5,0	0/1:46,0:34:99:122,0,117	0/1:16,0:20:41.05:41,0,44	0/1:9,0:10:6.50:7,0,15
chr10	56943920	.	TC	T	660.39	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.321;DP=974;FS=19.711;HRun=1;HaplotypeScore=94.9522;InbreedingCoeff=0.9995;MQ=74.04;MQ0=0;MQRankSum=-1.007;QD=34.76;ReadPosRankSum=0.271;VQSLOD=1.8976;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:58:99:0,166,2628	0/0:10,0:10:30.10:0,30,473	0/0:33,1:33:89.70:0,90,1409	0/0:33,0:32:83.33:0,83,1256	0/0:23,0:23:63.21:0,63,1004	1/1:0,19:19:54.18:755,54,0	0/0:35,0:35:99:0,102,1600	0/0:32,0:31:93.28:0,93,1398	0/0:58,0:58:99:0,175,2746	0/0:30,0:30:90.31:0,90,1436	0/0:14,0:14:42.14:0,42,665	0/0:46,0:46:99:0,135,2129	0/0:28,0:28:84.29:0,84,1341	0/0:35,0:35:99:0,105,1632	0/0:49,0:49:99:0,147,2321	0/0:50,0:50:99:0,150,2344	0/0:29,0:29:84.29:0,84,1342	0/0:25,0:25:75.26:0,75,1198	0/0:32,0:32:93.32:0,93,1480	0/0:22,0:22:66.23:0,66,1054	0/0:76,0:76:99:0,226,3563	0/0:46,0:46:99:0,135,2153	0/0:26,0:26:72.24:0,72,1138	0/0:42,0:42:99:0,123,1915	0/0:28,0:28:81.23:0,81,1245	0/0:48,0:48:99:0,144,2294	0/0:30,0:30:84.29:0,84,1338	0/0:16,0:16:48.10:0,48,705
chr10	56944536	.	TG	T	10891.03	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=15.672;DP=674;FS=7.676;HRun=1;HaplotypeScore=63.0683;InbreedingCoeff=0.9998;MQ=81.13;MQ0=0;MQRankSum=-2.112;QD=39.18;ReadPosRankSum=2.670;VQSLOD=5.4398;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,114,1793	0/0:9,0:9:27.09:0,27,430	0/0:18,0:18:54.18:0,54,812	0/0:20,0:20:57.16:0,57,820	0/0:20,0:20:57.19:0,57,906	0/0:19,0:19:57.19:0,57,911	0/0:22,0:22:66.23:0,66,1052	0/0:34,0:34:99:0,102,1589	1/1:0,23:23:66.22:923,66,0	1/1:1,20:21:63.18:842,63,0	1/1:0,20:20:57.19:797,57,0	0/0:20,0:20:60.20:0,60,957	0/0:22,0:22:66.23:0,66,1055	0/0:15,0:15:45.15:0,45,720	1/1:0,22:22:54.18:755,54,0	0/0:28,1:29:45.32:0,45,1278	0/0:24,0:24:72.25:0,72,1151	0/0:26,0:26:78.27:0,78,1243	1/1:0,32:32:96.32:1342,96,0	1/1:0,14:14:42.14:587,42,0	1/1:0,51:51:99:1888,135,0	0/0:16,0:16:45.15:0,45,719	0/0:17,0:17:51.16:0,51,791	0/0:47,0:47:99:0,141,2202	1/1:0,24:24:66.22:923,66,0	1/1:0,27:27:81.24:1112,81,0	1/1:0,31:31:84.28:1175,84,0	1/1:0,13:13:39.13:545,39,0
chr10	56946308	.	GGTGTGTGTGTGTGT	G	3877.43	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=5.051;DP=561;FS=4.638;HRun=0;HaplotypeScore=207.2532;InbreedingCoeff=0.8742;MQ=65.98;MQ0=14;MQRankSum=-7.952;QD=25.18;ReadPosRankSum=-0.018;VQSLOD=2.6936;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:49.05:0,49,2809	0/0:15,0:15:15.02:0,15,564	0/0:32,0:22:6.02:0,6,154	0/0:42,0:28:15.05:0,15,435	0/0:15,0:15:24.08:0,24,1593	1/1:8,8:18:21.07:744,21,0	1/1:15,5:20:12.04:471,12,0	0/0:22,0:20:21.07:0,21,1033	0/0:13,0:16:27.08:0,27,832	0/0:14,0:15:27.07:0,27,730	0/0:9,0:11:21.07:0,21,728	1/1:10,5:15:5.88:235,6,0	0/0:10,0:11:21.07:0,21,1300	0/0:16,0:16:24.40:0,24,1391	0/0:8,0:16:30.09:0,30,1034	1/1:5,5:11:15.05:528,15,0	1/1:25,5:31:6.02:215,6,0	1/1:14,6:20:12.04:471,12,0	0/0:23,0:21:14.25:0,14,350	0/0:8,0:12:15.03:0,15,427	0/0:34,0:44:60.21:0,60,1912	1/1:12,11:23:24.75:861,25,0	0/0:6,5:11:0.43:0,0,0	1/1:10,4:15:9.03:353,9,0	0/0:18,0:22:27.09:0,27,909	0/0:12,0:20:36.12:0,36,1111	0/0:10,0:16:27.09:0,27,919	0/0:4,0:7:9.03:0,9,298
chr10	56947083	.	TG	T	5076.43	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=8.857;DP=548;FS=14.648;HRun=7;HaplotypeScore=63.0569;InbreedingCoeff=0.9925;MQ=90.52;MQ0=0;MQRankSum=-0.173;QD=25.51;ReadPosRankSum=3.268;VQSLOD=4.2640;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:93.24:0,93,1138	0/0:9,0:9:24.04:0,24,274	0/0:32,0:31:66.78:0,67,828	0/0:23,1:23:11.32:0,11,390	0/0:18,0:18:48.14:0,48,593	1/1:3,20:23:60.13:612,60,0	1/1:6,22:28:60.13:612,60,0	0/0:11,0:11:21.06:0,21,254	0/0:15,0:15:42.13:0,42,528	0/0:24,0:24:69.21:0,69,847	0/0:11,0:11:27.08:0,27,329	1/1:2,19:21:54.12:551,54,0	0/0:16,0:16:48.15:0,48,604	0/0:14,0:14:36.12:0,36,453	0/0:8,0:8:21.06:0,21,253	1/1:2,16:18:45.10:459,45,0	1/1:2,33:35:87.19:887,87,0	1/1:0,24:24:63.14:643,63,0	0/0:12,0:12:33.05:0,33,396	0/0:19,0:19:54.17:0,54,675	0/0:34,0:34:87.22:0,87,1039	1/1:2,12:14:35.96:334,36,0	1/1:1,13:14:39.09:397,39,0	1/1:0,22:22:57.13:581,57,0	0/0:15,0:15:45.13:0,45,554	0/0:23,0:23:60.18:0,60,742	0/0:17,0:17:42.13:0,42,523	0/0:13,0:13:36.10:0,36,439
chr10	56949416	.	TTCCTCTTCC	T	3146.68	PASS	AB=0.886;AC=20;AF=0.370;AN=54;BaseQRankSum=1.215;DP=330;FS=63.803;HRun=0;HaplotypeScore=173.3440;InbreedingCoeff=0.3541;MQ=35.87;MQ0=20;MQRankSum=-4.469;QD=20.17;ReadPosRankSum=-2.721;VQSLOD=0.8516;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:72.13:0,72,2001	0/0:5,0:4:9.01:0,9,196	./.	0/0:5,0:2:6:0,6,52	0/0:9,0:8:20.56:0,21,718	0/1:12,0:11:6.06:6,0,266	0/0:9,0:7:11:0,11,158	0/0:21,0:17:32.40:0,32,471	1/1:4,2:5:13.77:246,14,0	1/1:11,7:15:17.60:705,18,0	0/1:7,0:7:2.06:110,0,2	0/0:14,0:14:18.52:0,19,357	0/0:7,0:7:17.99:0,18,417	0/0:14,0:14:42.14:0,42,1316	1/1:6,3:9:24.18:354,24,0	0/1:11,0:11:31.61:32,0,270	0/0:14,0:14:1.28:0,1,314	0/0:10,0:10:26.87:0,27,392	1/1:7,7:9:22.54:264,23,0	0/1:13,2:15:33.29:302,0,33	1/1:6,0:5:9.95:103,10,0	0/0:13,0:13:33.20:0,33,385	0/0:16,0:15:18.53:0,19,221	0/1:7,0:7:12.48:12,0,40	0/1:13,3:16:56.66:257,0,57	0/1:17,4:21:68.06:374,0,68	0/1:1,10:11:3.52:383,0,4	1/1:1,2:3:6.02:180,6,0
chr10	56949436	.	C	CCCCT	2059.77	PASS	AB=0.915;AC=8;AF=0.143;AN=56;BaseQRankSum=8.891;DP=320;FS=154.336;HRun=0;HaplotypeScore=146.0051;InbreedingCoeff=-0.1985;MQ=29.49;MQ0=33;MQRankSum=-3.187;QD=18.23;ReadPosRankSum=0.808;VQSLOD=0.5681;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:54.19:0,54,1103	0/0:5,0:4:9.03:0,9,174	0/0:19,0:2:3.01:0,3,63	0/0:22,0:3:9.03:0,9,178	0/1:10,0:8:35.39:35,0,220	0/0:13,0:9:23.74:0,24,367	0/0:7,0:5:11.99:0,12,155	0/0:11,0:10:26.85:0,27,390	0/0:5,0:4:12:0,12,134	0/1:19,1:17:99:260,0,399	0/1:2,1:2:31.32:41,0,31	0/0:10,0:9:23.97:0,24,335	0/0:6,0:5:12.04:0,12,237	0/0:15,0:14:36.11:0,36,710	0/0:7,0:7:21.06:0,21,248	0/0:9,0:9:27:0,27,303	0/0:14,0:13:24:0,24,270	0/0:9,0:9:14.08:0,14,176	0/0:11,0:7:15.03:0,15,243	0/1:10,2:11:99:421,0,127	0/0:6,0:3:5.93:0,6,54	0/1:16,0:14:99:217,0,273	0/1:17,0:14:99:485,0,159	0/0:7,0:6:4.83:0,5,46	0/1:11,5:16:15.84:594,0,16	0/1:19,0:18:99:140,0,375	0/0:9,0:9:15.04:0,15,215	0/0:2,0:2:6.02:0,6,100
chr10	56949439	.	C	CT	764.61	PASS	AB=0.891;AC=8;AF=0.143;AN=56;BaseQRankSum=8.354;DP=322;FS=96.328;HRun=1;HaplotypeScore=140.5266;InbreedingCoeff=-0.1725;MQ=28.66;MQ0=35;MQRankSum=-1.095;QD=6.54;ReadPosRankSum=0.648;VQSLOD=-0.3867;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:54.16:0,54,684	0/0:5,0:4:8.97:0,9,83	0/0:19,0:2:6.02:0,6,74	0/0:23,0:3:9.03:0,9,117	0/1:10,0:8:22.27:22,0,145	0/0:13,0:9:17.10:0,17,225	0/0:7,0:5:8.53:0,9,81	0/0:9,0:8:20.66:0,21,182	0/0:5,0:4:10.34:0,10,48	0/1:19,2:18:89.93:90,0,176	0/1:3,0:2:7.21:34,0,7	0/0:10,0:9:15.93:0,16,209	0/0:8,0:7:12.04:0,12,155	0/0:15,0:14:36.12:0,36,466	0/0:9,0:8:19.52:0,20,93	0/0:9,0:9:17.49:0,17,142	0/0:13,0:12:14.64:0,15,125	0/0:8,0:8:11.28:0,11,97	0/0:9,0:4:12.02:0,12,149	0/1:8,4:11:43.23:161,0,43	0/0:5,0:2:2.80:0,3,13	0/1:14,2:14:99:118,0,122	0/1:14,4:15:97.88:151,0,98	0/0:7,0:6:3.01:0,3,34	0/1:14,3:17:55.35:254,0,55	0/1:18,2:19:67.17:67,0,185	0/0:8,0:8:14.45:0,14,119	0/0:3,0:3:5.96:0,6,70
chr10	56949456	.	CCTTCCT	C	435.92	PASS	AB=0.970;AC=11;AF=0.196;AN=56;BaseQRankSum=7.128;DP=366;FS=9.300;HRun=0;HaplotypeScore=186.5251;InbreedingCoeff=-0.1199;MQ=38.52;MQ0=35;MQRankSum=-1.479;QD=2.66;ReadPosRankSum=-2.627;VQSLOD=1.5039;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:46.71:0,47,1425	0/0:5,0:5:11.60:0,12,114	0/0:23,0:4:9.24:0,9,123	0/1:36,0:6:14.35:14,0,115	0/0:7,0:4:6.02:0,6,120	0/1:15,0:11:22.92:23,0,470	0/0:5,0:5:3.01:0,3,69	0/0:13,0:12:29.87:0,30,452	0/0:6,0:5:5.51:0,6,152	0/0:24,0:20:27.37:0,27,540	0/0:10,0:8:8.36:0,8,117	0/1:10,1:10:99:134,0,470	0/0:8,0:7:9.03:0,9,278	0/0:17,0:16:39.13:0,39,1126	0/1:12,0:11:1.32:1,0,170	0/0:7,0:7:15.05:0,15,334	0/0:11,0:10:11.97:0,12,271	0/1:7,1:8:57.96:58,0,225	0/0:5,0:1:3.01:0,3,52	0/1:13,0:12:56.93:57,0,58	0/0:7,0:3:3:0,3,29	0/1:19,1:18:95.51:96,0,362	0/1:20,0:18:99:110,0,251	0/0:8,2:9:3.01:0,3,67	0/1:24,0:23:37.96:38,0,260	0/0:20,0:20:27.13:0,27,502	1/1:4,0:4:8.03:45,8,0	0/0:5,0:4:9.02:0,9,145
chr10	56949511	.	T	TTCC	2652.49	PASS	AB=0.895;AC=12;AF=0.231;AN=52;BaseQRankSum=0.423;DP=498;FS=77.980;HRun=0;HaplotypeScore=290.8981;InbreedingCoeff=-0.3392;MQ=57.92;MQ0=6;MQRankSum=-1.670;QD=10.01;ReadPosRankSum=-4.495;VQSLOD=0.2714;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:48:0,48,690	0/1:7,1:8:45.77:59,0,46	0/0:51,0:26:6.60:0,7,261	0/0:54,0:24:17.01:0,17,251	0/1:17,2:19:99:143,0,161	0/0:12,0:12:26.27:0,26,339	0/0:5,0:5:6.02:0,6,87	0/0:16,0:13:31.57:0,32,425	0/0:3,0:3:3.01:0,3,50	0/1:19,3:22:99:299,0,279	0/1:11,7:18:33.96:261,0,34	0/0:3,0:3:6.02:0,6,80	0/1:14,0:14:0.03:0,0,282	0/0:15,0:15:18.94:0,19,252	0/0:10,0:10:23.52:0,24,312	0/0:9,0:9:12.04:0,12,176	0/0:5,0:5:3.01:0,3,50	0/0:6,0:6:5.63:0,6,70	0/0:8,0:8:9.01:0,9,113	0/1:28,12:38:99:643,0,220	./.	0/1:30,3:33:99:250,0,231	0/1:20,1:21:99:184,0,255	./.	0/1:42,6:48:99:422,0,380	0/1:20,0:20:99:105,0,213	0/1:13,0:13:95.84:96,0,233	0/1:7,2:9:74.20:330,0,74
chr10	56949543	.	TCTTCCCCGGGGGGGGG	T	3639.36	PASS	AB=0.961;AC=18;AF=0.375;AN=48;BaseQRankSum=5.976;DP=416;FS=69.037;HRun=0;HaplotypeScore=335.6847;InbreedingCoeff=-0.3991;MQ=72.11;MQ0=2;MQRankSum=-0.885;QD=13.43;ReadPosRankSum=1.153;VQSLOD=-0.5037;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:17,0:17:99:243,0,276	0/1:7,1:8:97.69:98,0,161	0/0:51,0:29:36.92:0,37,1084	0/0:54,0:27:19.18:0,19,485	0/1:25,1:26:38.79:224,0,39	0/1:8,0:9:68.65:69,0,89	0/1:5,0:5:13.98:38,0,14	0/0:4,0:4:3:0,3,25	./.	0/1:15,2:18:67.72:412,0,68	0/1:14,0:15:49.13:221,0,49	0/0:2,0:1:3.01:0,3,64	0/1:13,1:14:6.06:6,0,171	0/0:13,0:13:25.06:0,25,544	0/0:5,0:5:12:0,12,188	1/1:5,0:5:0.47:1,0,0	./.	0/0:3,0:4:2.90:0,3,21	0/0:5,0:4:2.97:0,3,20	0/1:30,0:30:99:343,0,144	./.	0/1:27,3:31:63.26:629,0,63	1/1:16,1:17:4.46:311,4,0	./.	0/1:36,2:39:99:321,0,259	0/1:14,2:18:99:450,0,179	0/1:12,0:13:99:179,0,150	0/1:5,0:5:64.77:97,0,65
chr10	56949547	.	C	CCT	722.86	PASS	AB=0.892;AC=13;AF=0.271;AN=48;BaseQRankSum=7.475;DP=376;FS=78.118;HRun=0;HaplotypeScore=270.2479;InbreedingCoeff=-0.1747;MQ=75.21;MQ0=3;MQRankSum=-4.252;QD=3.53;ReadPosRankSum=1.128;VQSLOD=-0.1262;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:30.02:0,30,313	0/1:6,1:7:16.52:17,0,74	0/0:46,0:28:5.35:0,5,353	0/0:55,0:27:18.95:0,19,218	0/1:18,6:25:59.46:59,0,111	0/0:8,1:9:7.13:0,7,79	0/0:5,0:5:5.96:0,6,43	0/0:1,0:1:0.47:0,0,1	./.	0/1:13,1:14:40.18:160,0,40	0/1:13,2:15:13.36:13,0,73	0/0:2,0:1:3.01:0,3,35	0/0:13,1:14:17.96:0,18,171	0/0:12,0:12:26.50:0,26,301	0/0:5,0:5:11.99:0,12,125	0/1:2,0:2:0:0,0,0	./.	0/0:3,0:3:2.98:0,3,22	0/0:1,0:1:2.97:0,3,20	0/1:20,8:28:70.35:143,0,70	./.	0/1:22,4:26:99:114,0,157	1/1:14,2:16:12.56:87,13,0	./.	0/1:28,8:36:92.49:92,0,272	0/1:14,3:17:99:107,0,161	0/1:13,0:13:31.76:32,0,163	0/1:5,0:5:34.47:34,0,38
chr10	56949550	.	CGGGGGGGGG	C	5608.04	PASS	AB=1.000;AC=39;AF=0.886;AN=44;BaseQRankSum=6.981;DP=261;FS=3.613;HRun=9;HaplotypeScore=206.2038;InbreedingCoeff=0.5760;MQ=90.80;MQ0=2;MQRankSum=-4.938;QD=33.99;ReadPosRankSum=7.303;VQSLOD=0.4111;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:10,0:10:0.14:338,0,0	1/1:3,2:5:15.02:211,15,0	0/0:39,0:26:45.44:0,45,1135	0/0:48,0:25:20.34:0,20,584	1/1:6,9:17:28.39:554,28,0	1/1:3,1:5:6.02:82,6,0	1/1:4,0:4:3.01:39,3,0	1/1:1,0:1:2.99:24,3,0	./.	1/1:3,1:9:25.90:480,26,0	1/1:2,2:7:17.44:195,17,0	1/1:1,0:1:3:29,3,0	1/1:6,2:9:11.81:100,12,0	1/1:8,2:10:26.69:232,27,0	1/1:3,0:3:9.01:82,9,0	1/1:2,0:2:0.47:1,0,0	./.	./.	./.	1/1:6,9:18:23.51:607,24,0	./.	1/1:7,5:17:35.73:702,36,0	1/1:1,3:6:16.78:252,17,0	./.	1/1:8,9:18:46.32:677,46,0	1/1:8,3:14:39.05:645,39,0	1/1:5,0:7:18.05:263,18,0	1/1:2,0:2:6.02:96,6,0
chr10	56949570	.	C	CT	49.70	PASS	AB=0.931;AC=6;AF=0.115;AN=52;BaseQRankSum=5.046;DP=451;FS=19.972;HRun=0;HaplotypeScore=206.9503;InbreedingCoeff=0.0512;MQ=57.32;MQ0=6;MQRankSum=-0.163;QD=0.68;ReadPosRankSum=2.154;VQSLOD=1.4571;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:23.28:0,23,547	0/0:12,0:12:29.78:0,30,302	0/0:21,0:13:26.33:0,26,317	0/1:26,1:12:2.84:3,0,39	0/0:28,1:29:20.21:0,20,485	0/0:15,0:15:31.37:0,31,215	0/0:17,0:17:27.39:0,27,229	0/0:5,0:3:9.03:0,9,125	0/0:9,0:9:20.45:0,20,125	0/1:17,3:20:99:112,0,200	0/0:20,0:20:42.84:0,43,473	0/0:8,0:8:20.73:0,21,155	0/0:21,0:21:41.48:0,41,333	0/0:16,0:15:38.98:0,39,458	0/0:11,0:11:26.77:0,27,240	0/0:13,0:13:20.64:0,21,150	0/1:6,0:6:19.43:19,0,40	./.	0/0:7,0:6:12.04:0,12,161	0/0:30,1:30:26.17:0,26,441	./.	0/0:30,2:32:0.06:0,0,486	0/0:19,1:19:11.11:0,11,274	1/1:5,2:7:1.27:3,1,0	0/0:31,0:31:73.03:0,73,851	0/0:25,0:25:61.30:0,61,494	0/1:11,1:12:11.92:12,0,229	0/0:3,0:3:8.52:0,9,91
chr10	56950360	.	TG	T	5269.75	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-6.089;DP=371;FS=15.873;HRun=10;HaplotypeScore=53.3271;InbreedingCoeff=0.8819;MQ=78.38;MQ0=3;MQRankSum=-0.469;QD=18.96;ReadPosRankSum=5.500;VQSLOD=3.8737;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:8:10.15:0,10,53	0/0:1,0:2:2.84:0,3,14	0/0:20,0:13:24.28:0,24,223	0/0:25,0:17:26.87:0,27,257	0/0:4,0:5:5.85:0,6,48	1/1:5,6:11:21:182,21,0	1/1:5,5:11:23.03:188,23,0	0/0:7,0:10:11.65:0,12,74	1/1:0,9:9:24:208,24,0	1/1:3,10:13:29.98:259,30,0	1/1:0,12:12:29.98:260,30,0	1/1:2,8:10:20.98:182,21,0	0/0:11,0:11:17.94:0,18,164	0/0:12,0:12:7.84:0,8,135	1/1:3,10:13:23.81:208,24,0	1/1:3,17:20:50.87:443,51,0	1/1:13,21:34:60.50:587,61,0	1/1:3,11:14:29.99:260,30,0	1/1:4,9:12:27.88:235,28,0	1/1:6,7:13:1.92:174,2,0	1/1:7,9:16:29.60:257,30,0	1/1:1,9:10:23.99:208,24,0	1/1:3,6:8:21:182,21,0	1/1:4,11:15:35.99:312,36,0	1/1:6,8:14:29.99:259,30,0	1/1:1,8:9:26.03:214,26,0	1/1:7,17:25:61.96:520,62,0	1/1:2,5:7:15:130,15,0
chr10	56951686	.	G	GGT	2400.25	PASS	AB=0.844;AC=14;AF=0.259;AN=54;BaseQRankSum=-0.501;DP=626;FS=12.225;HRun=0;HaplotypeScore=121.5769;InbreedingCoeff=0.2249;MQ=62.71;MQ0=5;MQRankSum=-0.347;QD=9.56;ReadPosRankSum=-1.327;VQSLOD=2.2415;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:92.25:0,92,1130	0/0:10,0:11:8.39:0,8,40	0/0:33,0:18:26.61:0,27,262	0/0:27,0:15:26.94:0,27,281	0/0:27,0:27:66.17:0,66,788	1/1:15,9:26:11.91:177,12,0	0/1:27,5:32:22.79:393,0,23	0/1:19,0:19:4.82:41,0,5	0/0:12,0:11:8.15:0,8,36	0/0:23,0:23:14.49:0,14,63	0/1:12,1:13:13.80:36,0,14	0/1:14,6:23:28.66:400,0,29	0/0:17,0:17:45.14:0,45,556	0/0:29,0:29:63.20:0,63,777	0/0:24,0:24:21.49:0,21,90	1/1:11,1:12:3.90:48,4,0	0/1:26,15:41:27.51:722,0,28	0/1:16,6:22:28.76:278,0,29	0/0:22,0:20:8.02:0,8,43	0/0:20,0:20:10.78:0,11,45	0/1:26,0:26:2.03:2,0,66	1/1:8,6:16:6.49:90,6,0	./.	0/1:13,8:21:1.63:368,0,2	0/0:25,0:25:26.07:0,26,117	0/0:22,0:22:20.32:0,20,85	0/0:16,0:17:24.28:0,24,103	0/0:3,0:3:2.68:0,3,11
chr10	56951689	.	GTGTGTGTGTGTA	G	1322.63	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=-8.279;DP=630;FS=5.028;HRun=0;HaplotypeScore=223.3096;InbreedingCoeff=-0.0932;MQ=60.81;MQ0=5;MQRankSum=0.330;QD=3.84;ReadPosRankSum=-3.499;VQSLOD=1.7888;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,108,4829	1/1:3,8:11:12.04:346,12,0	0/0:32,0:16:7.14:0,7,423	0/0:29,0:15:20.58:0,21,374	0/0:27,0:27:69.10:0,69,2871	0/1:27,0:27:45.23:45,0,789	0/1:31,0:31:18.83:19,0,2081	1/1:17,1:18:41.84:413,42,0	0/1:11,0:10:45.34:45,0,446	0/1:24,0:24:9.79:10,0,1307	0/0:13,0:13:9.03:0,9,341	0/0:25,0:25:19.32:0,19,2466	0/0:17,0:17:48.14:0,48,2361	0/0:27,0:27:66.18:0,66,3078	0/0:23,0:23:24.08:0,24,760	0/1:14,0:14:99:100,0,314	0/1:42,0:42:62.97:63,0,3419	0/1:22,0:22:68.68:69,0,1632	0/1:20,0:18:99:109,0,543	0/0:18,0:18:12.04:0,12,380	0/1:28,0:28:47.79:48,0,967	0/1:17,0:17:3.89:4,0,544	1/1:12,0:12:3:25,3,0	0/0:20,0:20:22.18:0,22,1616	0/1:26,0:26:60.61:61,0,1285	0/1:24,0:24:99:107,0,939	0/1:17,0:16:28.28:28,0,987	0/0:3,0:3:3.01:0,3,104
chr10	56951697	.	GTGTA	G	4081.31	PASS	AB=0.982;AC=34;AF=0.607;AN=56;BaseQRankSum=-7.024;DP=636;FS=2.701;HRun=0;HaplotypeScore=132.5754;InbreedingCoeff=0.1887;MQ=56.76;MQ0=5;MQRankSum=-1.378;QD=8.70;ReadPosRankSum=-8.109;VQSLOD=0.1064;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,104,2121	1/1:10,0:10:11.94:112,12,0	0/1:29,0:11:4.78:5,0,214	0/0:33,0:13:21.21:0,21,233	0/0:25,0:25:69.01:0,69,1231	0/1:25,0:25:87.49:87,0,125	0/1:29,0:29:83.47:83,0,460	1/1:16,0:16:46.85:364,47,0	1/1:10,2:11:28.70:287,29,0	1/1:24,1:24:41.59:376,42,0	0/0:9,1:10:2.65:0,3,26	0/1:26,0:26:9.63:10,0,567	0/0:18,0:18:51.09:0,51,1034	0/0:26,0:26:72.04:0,72,1430	1/1:22,2:24:8.85:117,9,0	0/1:15,0:15:78.79:154,0,79	0/1:42,0:42:99:140,0,698	0/1:23,0:23:99:152,0,350	1/1:19,1:18:28.16:245,28,0	1/1:18,1:19:4.42:59,4,0	1/1:26,4:30:27.03:377,27,0	0/1:17,0:17:49.20:100,0,49	1/1:11,0:11:5.94:43,6,0	0/1:24,0:24:99:106,0,293	1/1:25,3:28:4.12:429,4,0	1/1:19,4:23:40.50:503,41,0	0/1:14,4:17:6.70:333,0,7	1/1:3,0:3:0.47:1,0,0
chr10	56951699	.	GTA	G	6152.52	PASS	AB=0.979;AC=40;AF=0.714;AN=56;BaseQRankSum=-3.847;DP=638;FS=2.263;HRun=0;HaplotypeScore=106.9573;InbreedingCoeff=0.4189;MQ=56.46;MQ0=6;MQRankSum=-1.146;QD=12.82;ReadPosRankSum=-6.958;VQSLOD=3.2546;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:57:57.38:0,57,1452	1/1:10,0:10:11.73:70,12,0	0/1:30,0:11:2.69:3,0,165	0/0:33,0:11:20.86:0,21,202	0/0:26,0:26:31.16:0,31,822	1/1:26,0:26:0.48:136,0,0	0/1:29,0:29:63.91:156,0,64	1/1:1,16:17:49.78:375,50,0	1/1:11,1:11:32.95:288,33,0	1/1:3,22:24:65.82:616,66,0	1/1:2,8:10:5.28:90,5,0	0/1:25,1:26:88.50:171,0,88	0/0:18,0:18:39.16:0,39,702	0/0:24,0:24:68.92:0,69,1049	1/1:2,20:22:24.04:321,24,0	1/1:15,0:15:22.13:184,22,0	0/1:41,2:43:93.49:324,0,93	0/1:24,0:24:52.43:175,0,52	1/1:3,15:16:40.19:394,40,0	1/1:2,18:20:12.02:161,12,0	1/1:26,5:31:53.97:541,54,0	1/1:17,0:17:16.43:145,16,0	1/1:11,0:11:5.94:43,6,0	0/1:22,1:23:19.23:168,0,19	1/1:23,5:28:48.94:649,49,0	1/1:18,5:23:59.95:596,60,0	1/1:14,3:16:50.95:502,51,0	1/1:0,3:3:3.01:46,3,0
chr10	56951701	.	ATG	A	956.77	PASS	AB=0.960;AC=23;AF=0.411;AN=56;BaseQRankSum=3.189;DP=647;FS=3.734;HRun=0;HaplotypeScore=124.9942;InbreedingCoeff=0.3287;MQ=55.28;MQ0=7;MQRankSum=-0.929;QD=2.97;ReadPosRankSum=0.201;VQSLOD=2.3608;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:45,13:58:32.61:33,0,1152	1/1:10,0:10:8.39:40,8,0	0/0:31,0:10:6.02:0,6,87	0/0:33,0:11:6.88:0,7,53	0/1:24,2:27:55.72:56,0,547	0/0:25,0:25:15.01:0,15,147	0/0:29,0:30:47.57:0,48,468	0/1:17,0:17:6.84:7,0,15	1/1:12,0:11:8.78:45,9,0	1/1:24,0:23:17.10:111,17,0	0/1:10,0:10:17.25:32,0,17	0/0:26,0:26:30.35:0,30,470	0/0:17,1:18:1.48:0,1,473	0/0:26,0:26:35.60:0,36,824	1/1:22,0:22:23.24:150,23,0	0/0:15,0:15:10.24:0,10,80	0/0:42,0:42:35.80:0,36,713	0/0:26,0:25:40.94:0,41,417	0/1:19,0:17:20.27:68,0,20	1/1:19,0:19:11.61:73,12,0	0/1:33,0:33:19.99:107,0,20	0/0:18,0:18:5.51:0,6,51	0/0:11,0:11:1.25:0,1,3	0/0:24,0:24:19.27:0,19,331	0/1:28,0:28:16.22:125,0,16	1/1:22,0:22:3.48:113,3,0	1/1:18,0:17:27.64:160,28,0	1/1:3,0:3:2.98:21,3,0
chr10	56952502	.	CG	C	1067.39	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=3.487;DP=544;FS=4.694;HRun=1;HaplotypeScore=58.3216;InbreedingCoeff=0.9936;MQ=85.76;MQ0=0;MQRankSum=-0.443;QD=33.36;ReadPosRankSum=-3.183;VQSLOD=2.3522;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,129,2053	1/1:0,6:6:18.06:252,18,0	0/0:23,0:23:69.12:0,69,1033	0/0:25,1:26:56.85:0,57,1057	0/0:21,0:21:63.21:0,63,1000	0/0:12,0:12:33.11:0,33,519	0/0:24,0:23:66.18:0,66,1024	1/1:0,26:26:72.18:935,72,0	0/0:15,0:15:45.15:0,45,718	0/0:12,0:11:33.11:0,33,526	0/0:12,0:12:33.07:0,33,499	0/0:23,0:23:69.24:0,69,1092	0/0:9,0:9:24.08:0,24,381	0/0:11,0:11:30.10:0,30,478	0/0:15,0:15:45.15:0,45,716	0/0:13,0:13:39.13:0,39,615	0/0:31,0:30:84.29:0,84,1338	0/0:35,0:35:99:0,102,1560	0/0:14,0:14:39.13:0,39,623	0/0:19,0:19:57.13:0,57,859	0/0:39,0:39:99:0,105,1673	0/0:16,0:16:45.15:0,45,711	0/0:19,0:19:54.18:0,54,851	0/0:31,0:31:87.23:0,87,1336	0/0:11,0:11:33.11:0,33,527	0/0:14,0:14:42.14:0,42,669	0/0:13,0:13:36.12:0,36,572	0/0:10,0:10:30.10:0,30,478
chr10	56952619	.	C	CGGG	3208.28	PASS	AB=0.818;AC=21;AF=0.553;AN=38;BaseQRankSum=5.948;DP=384;FS=10.385;HRun=6;HaplotypeScore=64.9309;InbreedingCoeff=0.6788;MQ=37.43;MQ0=61;MQRankSum=-6.007;QD=19.33;ReadPosRankSum=-2.033;VQSLOD=-0.4685;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:22:41.09:0,41,586	0/0:6,0:4:6.02:0,6,80	0/0:50,0:2:5.95:0,6,61	./.	0/0:17,0:17:36.09:0,36,477	1/1:4,9:11:17.97:271,18,0	0/1:9,10:17:27.53:186,0,28	0/0:12,0:12:22.35:0,22,317	0/1:4,0:4:0:0,0,0	./.	./.	1/1:14,5:18:29.88:510,30,0	0/0:9,0:7:15.05:0,15,212	0/0:9,0:9:15.04:0,15,213	./.	1/1:12,6:15:36.03:575,36,0	1/1:13,7:16:24.06:378,24,0	1/1:8,11:17:47.97:885,48,0	./.	1/1:2,0:2:3.01:42,3,0	0/1:6,0:6:0.01:0,0,0	1/1:6,4:8:5.98:84,6,0	1/1:4,4:6:3.01:64,3,0	1/1:15,7:19:23.84:365,24,0	./.	./.	./.	./.
chr10	56953207	.	TA	T	7202.37	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=6.579;DP=486;FS=3.893;HRun=10;HaplotypeScore=53.6637;InbreedingCoeff=0.9770;MQ=69.82;MQ0=1;MQRankSum=-0.510;QD=20.52;ReadPosRankSum=2.468;VQSLOD=5.9521;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,2:39:56.07:0,56,1033	1/1:0,6:6:15:130,15,0	0/0:25,0:12:24.54:0,25,291	0/0:22,0:16:19.91:0,20,163	0/0:25,0:26:71.99:0,72,754	1/1:2,18:20:38.98:339,39,0	1/1:0,11:11:32.99:286,33,0	1/1:3,23:26:71.80:599,72,0	1/1:1,10:11:29.99:260,30,0	1/1:0,14:14:41.99:365,42,0	1/1:4,19:23:47.92:409,48,0	1/1:0,12:12:29.99:260,30,0	0/0:13,0:13:36.10:0,36,398	0/0:10,0:10:27.07:0,27,299	1/1:2,18:20:44.99:391,45,0	1/1:0,12:12:32.99:286,33,0	1/1:5,16:21:32.98:286,33,0	1/1:1,18:19:47.99:416,48,0	1/1:3,13:16:38.96:334,39,0	1/1:1,29:30:80.97:703,81,0	1/1:2,4:6:8.99:78,9,0	1/1:0,6:6:18:156,18,0	1/1:1,12:13:32.99:286,33,0	1/1:2,6:8:17.99:156,18,0	1/1:3,29:32:59.99:521,60,0	1/1:2,14:16:41.99:365,42,0	1/1:2,19:21:50.91:443,51,0	1/1:2,6:8:15.88:132,16,0
chr10	56956018	.	AACACACAC	A	5136.68	PASS	AB=0.790;AC=19;AF=0.339;AN=56;BaseQRankSum=-1.140;DP=807;FS=12.904;HRun=0;HaplotypeScore=253.5409;InbreedingCoeff=0.5748;MQ=55.19;MQ0=23;MQRankSum=-7.368;QD=16.84;ReadPosRankSum=0.731;VQSLOD=2.4792;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:49:84.74:0,85,2516	0/1:8,1:10:64.86:65,0,269	0/0:30,0:18:12.04:0,12,255	0/0:37,0:24:29.89:0,30,570	0/0:21,0:22:24.06:0,24,441	0/0:25,0:25:51.17:0,51,1185	0/0:53,0:53:64.79:0,65,1413	0/0:35,0:20:32.98:0,33,572	1/1:10,27:38:43.93:990,44,0	0/1:23,4:21:17.68:581,0,18	1/1:5,7:12:9.70:169,10,0	0/0:38,0:38:81.20:0,81,1416	0/0:22,0:22:42.14:0,42,1250	0/0:25,0:27:53.92:0,54,1497	1/1:11,23:35:33.10:771,33,0	0/0:18,0:18:36.11:0,36,859	0/0:31,0:32:71.15:0,71,1685	0/0:20,0:20:45.94:0,46,867	1/1:13,10:21:35.99:553,36,0	1/1:9,4:11:14.97:296,15,0	0/1:32,30:60:37.01:77,0,37	0/0:22,0:22:36.12:0,36,870	0/0:13,0:14:30.10:0,30,535	0/0:52,0:52:99:0,118,2948	0/1:11,11:22:22.16:435,0,22	0/1:30,3:26:51.92:596,0,52	1/1:5,15:19:15.05:384,15,0	1/1:6,3:9:9.03:220,9,0
chr10	56956049	.	AC	A	917.49	PASS	AB=0.962;AC=13;AF=0.232;AN=56;BaseQRankSum=7.005;DP=1022;FS=0.330;HRun=2;HaplotypeScore=217.7611;InbreedingCoeff=-0.0829;MQ=44.08;MQ0=80;MQRankSum=9.211;QD=2.11;ReadPosRankSum=5.412;VQSLOD=-0.4643;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,4:48:51.31:0,51,1167	0/0:8,0:7:14.49:0,14,142	0/0:66,0:5:14.98:0,15,170	0/0:73,0:11:26.55:0,27,392	0/0:16,1:15:22.56:0,23,236	0/1:25,0:25:4.19:36,0,4	0/1:49,5:47:46.93:143,0,47	0/0:42,2:28:37.13:0,37,889	0/0:45,0:45:34.44:0,34,429	0/1:31,3:26:19.21:19,0,627	0/0:16,0:15:21.49:0,21,236	1/1:37,1:36:1.89:188,2,0	0/0:25,0:25:44.92:0,45,638	0/0:28,0:28:57.80:0,58,790	0/1:31,0:31:34.47:34,0,119	0/1:22,0:20:5.98:50,0,6	0/1:44,3:44:27.15:175,0,27	0/1:29,3:32:15.92:132,0,16	0/1:30,1:22:24.36:24,0,421	0/0:21,0:20:31.56:0,32,338	0/0:92,2:83:66.81:0,67,1100	0/1:26,0:26:6.47:6,0,43	0/1:21,1:20:21.39:28,0,21	0/1:71,2:72:66.87:231,0,67	0/0:31,0:29:46.78:0,47,383	0/0:38,2:29:11.50:0,12,575	0/0:22,0:20:25.58:0,26,219	0/0:9,0:9:13.31:0,13,168
chr10	56956215	.	ACC	A	702.94	PASS	AB=0.841;AC=11;AF=0.204;AN=54;BaseQRankSum=12.692;DP=894;FS=81.767;HRun=2;HaplotypeScore=365.3108;InbreedingCoeff=-0.1341;MQ=40.39;MQ0=39;MQRankSum=-8.580;QD=1.90;ReadPosRankSum=-2.790;VQSLOD=0.0198;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:37,3:39:5.78:6,0,1477	0/0:9,0:8:15.05:0,15,283	1/1:11,0:1:2.68:11,3,0	./.	0/0:18,8:26:0.60:0,1,391	0/1:22,2:23:34.01:34,0,533	0/0:49,1:42:82.63:0,83,1765	0/1:45,11:33:12.02:12,0,1261	0/1:27,4:29:31.04:31,0,788	0/1:58,19:73:99:352,0,2442	0/0:19,2:19:34.76:0,35,717	0/0:33,2:35:14.60:0,15,1406	0/1:22,3:25:33.16:33,0,923	0/0:28,3:30:15.41:0,15,971	0/0:29,3:32:2.25:0,2,983	0/0:19,2:21:38.01:0,38,667	0/0:18,1:17:6.67:0,7,804	0/0:19,0:19:48:0,48,859	0/0:13,2:5:15.05:0,15,304	0/0:24,2:26:30.89:0,31,936	0/0:82,0:67:99:0,162,2996	0/0:40,7:45:28.13:0,28,1105	0/0:21,4:25:19.88:0,20,372	0/0:42,0:42:60.01:0,60,1129	0/1:24,9:33:81.97:82,0,946	0/1:41,10:49:99:117,0,1666	0/1:11,10:20:99:163,0,370	0/0:7,0:6:12.04:0,12,243
chr10	56956240	.	A	ATAC	423.14	PASS	AB=0.903;AC=8;AF=0.160;AN=50;BaseQRankSum=7.963;DP=676;FS=67.835;HRun=0;HaplotypeScore=372.9662;InbreedingCoeff=-0.2564;MQ=36.33;MQ0=5;MQRankSum=-7.140;QD=1.87;ReadPosRankSum=1.200;VQSLOD=-0.4250;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:1.07:0,1,417	0/0:5,0:5:9.03:0,9,138	./.	./.	0/0:17,1:18:14.51:0,15,236	0/0:21,3:23:4.78:0,5,285	0/1:38,6:37:83.51:84,0,970	0/1:29,1:21:99:113,0,476	0/1:18,8:25:99:138,0,389	0/0:51,3:52:56.61:0,57,1594	0/0:18,1:18:16.57:0,17,490	0/1:28,1:29:21.15:21,0,464	0/0:24,2:26:8.57:0,9,471	0/1:24,2:25:68:68,0,367	0/1:23,4:27:73.68:74,0,303	0/1:18,3:22:36.64:37,0,156	0/0:12,0:11:24.08:0,24,428	0/0:12,1:13:0.21:0,0,222	0/0:4,0:3:9.03:0,9,143	0/0:22,1:23:25.60:0,26,447	0/0:47,0:40:33.12:0,33,600	0/0:37,2:39:22.38:0,22,351	0/0:24,1:25:6.10:0,6,214	0/0:33,2:35:23.69:0,24,363	0/0:24,1:25:46.16:0,46,826	0/0:42,2:41:0.93:0,1,1142	0/1:22,0:21:15.68:16,0,117	./.
chr10	56956263	.	C	CA	1892.09	PASS	AB=0.915;AC=39;AF=0.813;AN=48;BaseQRankSum=0.424;DP=441;FS=1.565;HRun=0;HaplotypeScore=188.7132;InbreedingCoeff=0.2762;MQ=34.57;MQ0=0;MQRankSum=-0.830;QD=4.97;ReadPosRankSum=0.250;VQSLOD=3.4588;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:0.52:0,1,3	./.	./.	./.	1/1:13,0:13:3.01:43,3,0	1/1:18,0:18:3.42:20,3,0	1/1:23,0:21:7.82:87,8,0	1/1:5,0:2:3:26,3,0	1/1:17,0:16:19.84:217,20,0	1/1:31,1:32:37.41:438,37,0	1/1:8,0:8:9.02:101,9,0	0/1:6,16:23:1.85:22,0,2	1/1:19,0:20:8.21:158,8,0	1/1:18,0:19:3.37:9,3,0	1/1:26,0:26:1.40:6,1,0	1/1:20,0:20:0.25:14,0,0	1/1:8,0:8:20.84:179,21,0	0/1:10,0:10:0:0,0,0	1/1:3,0:3:6.89:56,7,0	1/1:15,0:15:2.98:28,3,0	1/1:20,0:20:3.40:50,3,0	0/0:29,0:29:0.14:0,0,2	0/1:17,0:17:0.01:0,0,0	0/1:26,0:26:0:0,0,0	1/1:18,0:18:20.77:222,21,0	1/1:22,0:21:34.79:293,35,0	0/1:17,0:17:0.02:0,0,0	./.
chr10	56956546	.	A	ATG	626.20	PASS	AB=0.969;AC=16;AF=0.286;AN=56;BaseQRankSum=3.592;DP=582;FS=8.444;HRun=0;HaplotypeScore=297.4726;InbreedingCoeff=-0.0894;MQ=29.97;MQ0=11;MQRankSum=-1.543;QD=2.01;ReadPosRankSum=0.010;VQSLOD=0.9475;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:17:2.61:0,3,13	0/0:20,0:20:1.23:0,1,27	0/0:7,0:2:6.02:0,6,86	0/0:9,0:2:2.48:0,2,40	0/0:19,0:19:2.36:0,2,8	0/0:20,0:19:0.40:0,0,5	1/1:12,0:12:0.06:22,0,0	0/0:29,0:28:2.36:0,2,255	0/1:32,2:33:14.55:199,0,15	0/1:44,0:44:99:151,0,265	1/1:24,0:23:4.30:16,4,0	0/0:19,0:18:13.28:0,13,112	0/0:17,0:16:1.05:0,1,21	0/0:15,0:15:4.53:0,5,12	0/1:13,3:17:17.17:91,0,17	0/0:18,0:18:10.51:0,11,56	0/0:11,0:10:16.54:0,17,109	0/1:9,0:9:22.21:22,0,145	0/1:19,0:19:25.41:25,0,113	1/1:34,0:34:1.40:47,1,0	0/0:16,0:16:2.80:0,3,38	0/0:29,0:27:8.63:0,9,88	0/1:34,0:33:13.24:17,0,13	0/0:8,0:8:2.14:0,2,41	1/1:25,0:25:1.81:73,2,0	0/1:39,0:38:39.37:39,0,217	0/1:20,0:19:53.07:60,0,53	0/0:15,0:12:4.62:0,5,77
chr10	56956550	.	A	AT	109.52	PASS	AB=0.951;AC=9;AF=0.161;AN=56;BaseQRankSum=5.350;DP=614;FS=0.000;HRun=0;HaplotypeScore=151.0984;InbreedingCoeff=-0.0711;MQ=30.62;MQ0=12;MQRankSum=-2.945;QD=0.46;ReadPosRankSum=3.116;VQSLOD=2.4979;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:18:6.95:0,7,40	0/1:21,0:21:11.32:11,0,35	0/0:11,0:2:6.02:0,6,83	0/0:11,0:2:4.56:0,5,46	0/1:18,1:19:0:0,0,0	0/1:20,0:19:24.58:25,0,55	0/0:15,0:16:4.67:0,5,12	0/1:30,0:31:65.85:66,0,310	0/1:32,0:35:22.78:23,0,91	0/1:47,2:49:56.79:57,0,767	1/1:22,2:23:3.30:17,3,0	0/0:18,0:18:15.75:0,16,182	0/0:18,0:17:6.37:0,6,65	0/0:13,1:15:2.55:0,3,24	0/0:17,0:18:2.97:0,3,39	0/0:19,0:19:11.31:0,11,61	0/0:11,0:10:18.26:0,18,172	0/0:9,0:9:1.54:0,2,181	0/0:19,0:18:14.43:0,14,170	0/0:33,2:35:3.48:0,3,42	0/0:19,0:19:15.52:0,16,204	0/0:27,1:28:14.30:0,14,119	0/0:33,2:34:9.09:0,9,65	0/0:8,0:8:3.01:0,3,43	0/0:25,0:25:3.78:0,4,52	0/1:35,1:38:35.08:35,0,496	0/0:20,0:20:1.56:0,2,181	0/0:15,0:12:21.40:0,21,176
chr10	56957214	.	TG	T	7461.89	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=18.870;DP=602;FS=4.201;HRun=3;HaplotypeScore=98.9607;InbreedingCoeff=0.9987;MQ=86.95;MQ0=0;MQRankSum=-6.533;QD=31.35;ReadPosRankSum=1.306;VQSLOD=4.6820;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,135,1915	1/1:2,7:9:21.06:252,21,0	0/0:22,0:22:60.19:0,60,839	0/0:22,0:22:54.06:0,54,720	0/0:19,0:19:51.17:0,51,731	1/1:2,28:30:78.24:935,78,0	1/1:1,27:28:75.70:900,76,0	1/1:2,21:23:63.19:755,63,0	0/0:30,0:30:90.29:0,90,1279	0/0:22,0:22:63.21:0,63,893	0/0:11,0:11:33.11:0,33,475	1/1:0,17:17:48.15:575,48,0	0/0:18,0:18:54.18:0,54,775	0/0:11,0:11:33.09:0,33,455	0/0:24,0:24:72.24:0,72,1033	1/1:1,23:24:69.21:825,69,0	1/1:0,24:24:63.16:740,63,0	1/1:0,21:21:63.19:756,63,0	0/0:22,0:22:63.19:0,63,873	0/0:22,0:22:60.20:0,60,863	0/0:28,0:28:78.24:0,78,1101	1/1:3,17:20:48.15:575,48,0	1/1:2,10:12:30.09:360,30,0	1/1:3,27:30:66.20:789,66,0	0/0:11,0:11:33.11:0,33,474	0/0:25,0:25:72.21:0,72,997	0/0:22,0:22:63.21:0,63,906	0/0:7,0:7:21.07:0,21,302
chr10	56959666	.	G	GTC	68.43	PASS	AB=0.954;AC=4;AF=0.071;AN=56;BaseQRankSum=5.746;DP=684;FS=38.927;HRun=0;HaplotypeScore=239.1603;InbreedingCoeff=0.2058;MQ=35.44;MQ0=30;MQRankSum=-6.504;QD=0.62;ReadPosRankSum=3.048;VQSLOD=1.4976;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:26.89:0,27,245	0/0:11,0:11:20.60:0,21,129	1/1:23,0:2:2.51:7,3,0	0/0:25,0:3:8.82:0,9,58	0/0:26,0:25:11.53:0,12,106	0/0:32,0:32:32.68:0,33,212	0/0:22,0:21:28.26:0,28,197	0/0:27,0:25:61.93:0,62,539	0/0:18,0:19:15.55:0,16,212	0/1:51,2:49:57.86:58,0,759	0/0:16,1:16:11.69:0,12,72	0/0:30,0:30:39.31:0,39,260	0/0:21,1:21:36.87:0,37,246	0/0:19,0:19:21.96:0,22,158	0/0:29,0:30:7.58:0,8,155	0/0:11,0:11:12.62:0,13,74	0/0:18,0:18:13.37:0,13,187	0/0:10,0:10:15.60:0,16,183	0/0:29,0:23:45.80:0,46,419	0/0:34,0:35:24.41:0,24,174	0/0:26,0:25:32.10:0,32,296	0/0:34,3:36:5.91:0,6,69	0/0:29,0:28:24.65:0,25,189	0/0:12,0:12:14.69:0,15,135	0/0:30,1:31:24.57:0,25,184	0/1:30,2:33:98.19:98,0,451	0/0:18,0:18:32.23:0,32,295	0/0:11,0:11:17.70:0,18,213
chr10	56959672	.	G	GTGAT	1423.60	PASS	AB=0.972;AC=21;AF=0.375;AN=56;BaseQRankSum=8.213;DP=629;FS=66.316;HRun=0;HaplotypeScore=230.0104;InbreedingCoeff=-0.4888;MQ=35.29;MQ0=23;MQRankSum=-5.071;QD=3.13;ReadPosRankSum=-3.756;VQSLOD=-0.4234;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:19.63:0,20,323	0/1:8,0:8:10.20:10,0,138	1/1:12,0:1:1.25:3,1,0	0/0:19,0:3:3.01:0,3,32	0/1:23,1:24:16.13:16,0,81	0/1:31,0:31:26.14:26,0,237	0/1:23,0:22:17.39:17,0,157	0/1:24,0:22:99:121,0,489	0/1:17,0:17:61.75:62,0,214	0/1:50,2:49:99:449,0,1044	0/1:16,0:15:6.23:6,0,28	0/0:26,1:27:22.83:0,23,274	0/1:20,1:20:15.77:16,0,241	0/1:17,0:18:37.57:38,0,91	0/0:29,0:29:22.12:0,22,225	0/1:8,1:10:12.65:13,0,100	0/1:17,1:18:99:127,0,303	0/1:10,0:10:5.91:6,0,245	0/0:23,0:18:32.57:0,33,432	0/1:34,1:35:97.63:98,0,115	0/0:24,0:23:19.81:0,20,285	0/1:37,0:36:57.69:58,0,74	0/1:24,2:25:99:116,0,125	0/0:11,0:11:11.79:0,12,140	0/1:31,0:31:78.41:78,0,119	0/1:30,0:31:99:266,0,565	0/0:18,0:18:23.05:0,23,462	0/1:10,0:10:53.01:53,0,181
chr10	56959674	.	G	GATTGTGTA	3004.07	PASS	AB=0.926;AC=20;AF=0.357;AN=56;BaseQRankSum=7.574;DP=602;FS=46.058;HRun=0;HaplotypeScore=277.8947;InbreedingCoeff=-0.4661;MQ=33.51;MQ0=21;MQRankSum=-5.666;QD=6.52;ReadPosRankSum=-4.536;VQSLOD=0.8260;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:23.32:0,23,353	0/0:7,0:7:12.04:0,12,150	1/1:11,0:1:0.47:1,0,0	0/0:18,0:2:3.01:0,3,32	0/1:20,3:23:4.02:4,0,64	0/1:30,0:31:99:210,0,248	0/1:20,0:20:99:146,0,184	0/1:24,1:22:99:174,0,677	0/1:15,0:17:99:147,0,273	0/1:45,4:47:99:904,0,1310	0/1:13,2:14:20.51:21,0,21	0/0:25,0:25:8.54:0,9,288	0/1:17,0:19:99:297,0,283	0/1:16,0:17:25.82:26,0,123	0/1:29,0:29:9.36:9,0,209	0/0:7,0:8:7.95:0,8,107	0/1:18,1:19:82.01:82,0,366	0/0:10,0:10:15.52:0,16,380	0/1:21,0:16:3.65:4,0,581	0/1:31,3:34:99:248,0,146	0/0:24,0:23:7.31:0,7,316	0/1:31,3:34:79.67:80,0,105	0/1:23,2:24:99:117,0,175	0/0:10,0:10:11.49:0,11,108	0/1:30,0:31:38.35:38,0,168	0/1:24,3:30:99:540,0,907	0/0:17,0:17:23.23:0,23,561	0/1:7,1:8:99:111,0,250
chr10	56959675	.	T	TGT	690.36	PASS	AB=0.989;AC=21;AF=0.375;AN=56;BaseQRankSum=7.632;DP=590;FS=45.619;HRun=0;HaplotypeScore=213.1873;InbreedingCoeff=-0.1833;MQ=33.52;MQ0=17;MQRankSum=-6.651;QD=1.79;ReadPosRankSum=0.757;VQSLOD=1.4626;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:10.41:0,10,89	0/1:7,0:7:0:0,0,0	0/0:11,0:1:0:0,0,0	0/1:16,0:2:0:0,0,0	0/0:23,0:23:4.96:0,5,27	0/1:31,0:31:8.66:9,0,20	0/0:17,3:20:3.93:0,4,28	0/1:22,0:21:22.21:22,0,155	0/1:17,0:17:19.97:20,0,71	0/1:48,0:47:99:313,0,316	1/1:15,0:14:2.95:7,3,0	0/0:22,0:23:1.78:0,2,30	0/0:20,0:19:2.62:0,3,37	0/0:16,0:16:2.51:0,3,35	1/1:28,0:28:3.95:60,4,0	1/1:8,0:8:5.74:31,6,0	0/1:17,2:19:40.11:40,0,53	0/1:10,0:10:17.96:18,0,90	0/1:21,0:16:29.89:30,0,89	0/0:34,0:34:1.52:0,2,18	0/1:24,0:23:0.03:0,0,73	0/1:35,0:34:0.12:0,0,32	0/0:25,0:24:5.43:0,5,69	0/0:9,0:9:5.65:0,6,19	0/1:29,0:30:5:29,0,5	0/1:30,0:30:99:169,0,222	0/1:17,0:17:24.04:24,0,55	0/1:7,0:7:43.37:53,0,43
chr10	56959684	.	T	TG	267.13	PASS	AB=1.000;AC=21;AF=0.955;AN=22;DP=82;FS=0.000;HRun=1;HaplotypeScore=23.8371;InbreedingCoeff=0.1557;MQ=36.81;MQ0=0;QD=7.03;VQSLOD=0.5518;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,0:3:5.93:40,6,0	./.	./.	./.	1/1:4,2:6:2.98:22,3,0	1/1:5,2:7:5.03:31,5,0	./.	./.	./.	1/1:1,0:1:1.25:3,1,0	./.	./.	1/1:2,1:3:5.66:34,6,0	./.	./.	./.	./.	1/1:1,3:4:2.88:15,3,0	1/1:0,1:1:2.97:20,3,0	./.	1/1:2,4:6:8.89:61,9,0	./.	./.	1/1:3,0:3:8.41:49,8,0	0/1:1,0:1:0:0,0,0	./.	./.	1/1:3,0:3:8.93:63,9,0
chr10	56961346	.	TGTG	T	80.47	PASS	AB=0.978;AC=14;AF=0.280;AN=50;BaseQRankSum=3.107;DP=365;FS=5.023;HRun=0;HaplotypeScore=135.2218;InbreedingCoeff=-0.1886;MQ=25.25;MQ0=24;MQRankSum=-1.039;QD=0.38;ReadPosRankSum=0.486;VQSLOD=2.5498;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:16,0:14:10.72:11,0,147	1/1:2,0:2:1.55:4,2,0	./.	./.	0/0:8,0:6:3.01:0,3,68	0/1:12,0:7:1.86:2,0,46	0/0:21,0:14:14.24:0,14,89	0/1:14,1:12:18.44:18,0,322	0/1:19,0:10:11.77:29,0,12	0/1:19,0:14:2.03:2,0,331	0/0:11,0:11:0.16:0,0,0	0/1:11,1:9:19.20:20,0,19	0/0:12,0:7:9.97:0,10,113	0/1:19,0:16:28.13:28,0,42	0/0:13,0:9:3.38:0,3,38	0/1:12,2:11:17.99:18,0,85	0/1:14,0:13:8.32:13,0,8	0/1:10,0:10:43.45:43,0,62	0/0:19,0:5:7.26:0,7,68	./.	0/1:45,0:36:6.27:14,0,6	0/1:13,0:11:1.30:1,0,46	0/0:4,0:4:0.10:0,0,0	0/0:23,0:23:3.38:0,3,94	0/0:16,0:12:6.72:0,7,51	0/0:10,0:7:21.07:0,21,374	0/0:6,0:6:12.15:0,12,103	0/0:6,0:4:6.02:0,6,86
chr10	56961349	.	G	GGT	196.76	PASS	AB=0.969;AC=19;AF=0.365;AN=52;BaseQRankSum=1.023;DP=431;FS=5.263;HRun=0;HaplotypeScore=164.7819;InbreedingCoeff=-0.2615;MQ=24.74;MQ0=37;MQRankSum=0.217;QD=0.66;ReadPosRankSum=-4.019;VQSLOD=1.3625;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:18,0:15:30.69:88,0,31	1/1:3,0:2:0.89:2,1,0	./.	./.	0/0:10,0:9:2.93:0,3,38	0/1:14,0:8:0.98:1,0,25	0/1:21,0:14:15.53:16,0,55	0/0:19,0:14:14.36:0,14,267	0/1:19,0:12:0.36:0,0,38	0/1:22,0:16:4.55:5,0,196	0/1:11,1:12:0:0,0,0	0/1:15,0:12:28.12:62,0,28	0/1:16,0:10:38.12:38,0,53	0/1:19,1:17:13.74:14,0,29	0/1:14,0:10:26.93:28,0,27	0/1:14,1:12:4.22:4,0,75	0/0:17,0:15:0.96:0,1,17	0/1:10,0:11:12.73:13,0,42	0/0:23,0:5:8.75:0,9,72	0/1:6,0:4:0:0,0,0	0/1:45,4:38:4.59:5,0,22	0/1:17,0:15:0.42:0,0,20	0/0:6,0:4:0:0,0,0	0/0:25,0:25:5.08:0,5,57	0/1:17,1:14:3.46:22,0,3	0/0:13,0:8:22.75:0,23,209	0/1:6,0:6:19.24:19,0,21	0/0:6,0:4:6:0,6,52
chr10	56961351	.	T	TGTG	303.81	PASS	AB=0.976;AC=14;AF=0.269;AN=52;BaseQRankSum=1.622;DP=477;FS=2.968;HRun=0;HaplotypeScore=177.5290;InbreedingCoeff=-0.1973;MQ=24.46;MQ0=45;MQRankSum=0.462;QD=1.45;ReadPosRankSum=-0.655;VQSLOD=2.3625;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:19,2:17:99:127,0,141	0/0:3,0:2:5.04:0,5,33	./.	./.	0/0:11,0:9:3.01:0,3,50	0/1:15,0:9:17.78:18,0,19	0/1:23,1:15:49.94:50,0,92	0/0:25,0:15:22.21:0,22,243	0/0:21,0:12:22.58:0,23,131	0/1:23,0:17:14.11:14,0,248	0/1:12,0:12:0.11:0,0,0	0/1:17,0:13:4.09:4,0,64	0/0:20,0:13:18.28:0,18,163	0/0:22,0:18:14.21:0,14,150	0/1:13,2:11:28.12:89,0,28	0/0:17,0:14:11.74:0,12,70	0/1:17,0:15:11.19:11,0,88	0/1:14,0:12:16.37:16,0,92	0/0:25,0:5:7.52:0,8,62	1/1:6,0:4:0.89:2,1,0	0/0:50,0:39:17.62:0,18,140	0/1:18,0:16:23.63:40,0,24	0/0:6,0:4:0.15:0,0,0	0/0:28,0:28:5.31:0,5,51	0/1:20,1:16:27.43:58,0,27	0/0:17,0:9:20.19:0,20,213	0/1:7,0:7:4.96:5,0,38	0/0:6,0:4:4.24:0,4,27
chr10	56961360	.	GGT	G	1577.36	PASS	AB=0.902;AC=27;AF=0.500;AN=54;BaseQRankSum=-2.729;DP=689;FS=7.875;HRun=0;HaplotypeScore=193.0060;InbreedingCoeff=-0.2916;MQ=27.05;MQ0=82;MQRankSum=1.028;QD=2.96;ReadPosRankSum=2.606;VQSLOD=1.5507;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:22:7.51:0,8,200	0/1:6,0:4:6.86:31,0,7	./.	0/0:31,0:2:0.89:0,1,2	0/0:15,0:14:14.62:0,15,170	0/1:12,3:12:35.34:35,0,37	1/1:30,7:29:15.68:222,16,0	0/1:24,4:18:56.13:110,0,56	0/0:27,0:19:15.29:0,15,127	0/1:29,4:24:99:126,0,111	1/1:10,4:16:2.79:36,3,0	0/1:24,1:21:52.55:53,0,89	0/0:23,0:18:8.56:0,9,283	0/1:22,0:21:5.16:5,0,242	0/1:19,1:17:11.17:11,0,32	0/1:16,3:15:52.67:79,0,53	0/1:18,3:19:14.91:136,0,15	0/1:13,1:14:26.85:126,0,27	0/1:38,1:10:4.50:5,0,76	1/1:13,1:12:0.84:63,1,0	0/1:59,6:52:87.42:87,0,90	1/1:9,7:17:13:177,13,0	1/1:7,3:7:3:37,3,0	0/1:30,6:37:0.62:102,0,1	0/1:17,7:20:41.66:42,0,123	0/1:21,3:13:37.20:141,0,37	0/1:5,0:7:21.79:42,0,22	0/1:7,4:9:6.02:63,0,6
chr10	56961413	.	GGT	G	2953.25	PASS	AB=0.859;AC=16;AF=0.286;AN=56;BaseQRankSum=-1.780;DP=1066;FS=7.009;HRun=0;HaplotypeScore=264.1646;InbreedingCoeff=-0.2032;MQ=33.53;MQ0=103;MQRankSum=-4.837;QD=5.59;ReadPosRankSum=-0.651;VQSLOD=2.0273;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:38:47.42:0,47,703	0/1:13,0:10:53.85:54,0,120	0/0:76,0:3:0.14:0,0,39	0/0:88,0:9:20.97:0,21,215	0/0:19,0:19:30.10:0,30,431	0/1:32,0:29:7.21:7,0,227	0/0:53,0:41:27.50:0,28,757	0/1:41,1:28:17.63:18,0,379	0/1:27,11:31:7.02:351,0,7	0/1:30,13:38:99:653,0,131	0/1:11,7:17:25.74:49,0,26	0/0:39,0:31:41.44:0,41,409	0/0:29,0:22:51.12:0,51,740	0/1:27,1:25:20.04:20,0,317	0/1:21,9:26:31.38:309,0,31	0/0:29,0:23:24.38:0,24,446	0/0:31,0:26:32.48:0,32,441	0/0:25,0:24:44.02:0,44,477	0/1:29,1:14:82.26:162,0,82	0/1:15,6:20:9.96:207,0,10	0/1:92,31:108:99:598,0,120	0/0:27,0:24:10.97:0,11,278	0/0:13,1:9:11.98:0,12,129	0/0:59,0:53:40.89:0,41,620	0/1:30,10:35:99:141,0,109	0/1:32,4:23:10.60:190,0,11	1/1:7,5:10:16.29:180,16,0	0/1:11,4:15:43.50:176,0,44
chr10	56961468	.	G	GTA	3233.06	PASS	AB=0.847;AC=25;AF=0.446;AN=56;BaseQRankSum=5.880;DP=885;FS=14.781;HRun=0;HaplotypeScore=281.3587;InbreedingCoeff=-0.8097;MQ=45.48;MQ0=16;MQRankSum=-4.044;QD=4.14;ReadPosRankSum=3.465;VQSLOD=0.8539;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:21,8:26:99:195,0,533	0/1:4,4:8:72.64:175,0,73	0/1:32,0:8:15.19:15,0,100	0/1:39,1:10:5.39:5,0,69	0/1:7,7:14:99:213,0,141	0/1:26,2:27:30.99:31,0,708	0/1:23,9:30:99:192,0,565	0/0:30,1:29:26.74:0,27,802	0/1:35,4:35:63.62:64,0,962	0/1:33,6:37:99:133,0,966	0/1:9,1:9:38.55:39,0,94	0/1:27,7:29:99:122,0,625	0/0:20,0:17:29.35:0,29,472	0/1:18,1:18:18.59:19,0,252	0/1:31,3:31:84.78:85,0,825	0/1:19,2:18:57.33:57,0,281	0/1:30,6:34:99:104,0,847	0/1:21,4:22:69.77:70,0,441	0/1:22,3:21:99:163,0,426	0/1:15,4:19:99:192,0,327	0/1:142,35:162:99:768,0,2161	0/1:18,4:22:99:222,0,212	0/1:4,3:7:43.80:44,0,128	0/0:48,6:50:3.24:0,3,650	0/1:16,6:20:99:142,0,112	0/1:31,6:33:99:133,0,943	0/1:17,3:19:36.44:36,0,585	0/1:7,4:11:99:169,0,235
chr10	56961508	.	GGTGT	G	599.45	PASS	AB=0.962;AC=12;AF=0.214;AN=56;BaseQRankSum=2.774;DP=1028;FS=0.696;HRun=0;HaplotypeScore=232.7084;InbreedingCoeff=-0.0925;MQ=40.88;MQ0=168;MQRankSum=-2.383;QD=1.65;ReadPosRankSum=-2.935;VQSLOD=1.9234;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:33:51.15:0,51,1189	1/1:6,0:5:0.95:24,1,0	0/0:36,0:11:3.01:0,3,38	0/1:42,0:10:18.11:18,0,43	0/1:15,0:11:0:0,0,0	0/1:28,4:25:53.32:53,0,767	0/0:41,5:36:23.76:0,24,996	0/1:53,0:34:99:139,0,204	0/0:33,0:29:64.45:0,64,1240	0/0:46,0:24:50.63:0,51,946	0/0:19,0:13:9.02:0,9,139	0/1:36,2:27:99:108,0,684	0/0:25,0:15:33.07:0,33,682	0/0:27,0:17:30.06:0,30,664	0/0:31,0:25:56.81:0,57,1123	0/1:26,1:18:73.09:73,0,320	0/1:38,2:32:99:107,0,1010	0/1:29,0:20:52.52:53,0,651	0/0:48,0:17:17.91:0,18,252	0/0:10,0:8:14.88:0,15,270	0/0:178,0:167:99:0,173,3926	0/1:20,0:16:34.41:34,0,191	0/0:11,0:9:9.97:0,10,118	0/1:49,6:48:99:132,0,868	0/0:23,0:13:18.03:0,18,343	0/0:44,0:23:21.50:0,21,722	0/0:13,0:10:18.06:0,18,386	0/0:18,0:9:21.07:0,21,514
chr10	56961776	.	A	AATTTATTTATTT	3558.68	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-2.272;DP=253;FS=3.013;HRun=0;HaplotypeScore=79.3692;InbreedingCoeff=0.6399;MQ=63.82;MQ0=1;MQRankSum=-5.749;QD=45.05;ReadPosRankSum=-1.363;VQSLOD=2.7184;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:30.09:0,30,848	0/0:1,0:4:12.04:0,12,253	0/0:6,0:5:3.01:0,3,72	0/0:4,0:4:2.04:0,2,6	0/0:12,0:12:12.04:0,12,417	0/0:13,0:13:27.09:0,27,762	0/0:4,0:4:9.03:0,9,285	0/0:9,0:23:28.16:0,28,335	1/1:3,2:5:3.01:176,3,0	1/1:3,0:3:3.01:42,3,0	1/1:5,2:7:3.01:176,3,0	0/0:5,0:5:15.05:0,15,471	0/0:6,0:6:12.04:0,12,418	0/0:8,0:8:3.01:0,3,104	1/1:3,0:3:3.01:59,3,0	0/0:6,0:6:12.04:0,12,413	0/0:33,0:33:72.16:0,72,2060	0/0:17,0:17:24.08:0,24,807	1/1:4,0:4:3.01:176,3,0	1/1:7,4:12:12.04:567,12,0	1/1:5,0:5:3.01:43,3,0	0/0:6,0:6:6.02:0,6,137	0/0:5,0:5:3.01:0,3,104	0/0:4,0:4:3.01:0,3,104	1/1:10,0:10:9.03:386,9,0	1/1:6,3:9:15.05:822,15,0	1/1:2,4:6:3.01:176,3,0	1/1:10,3:14:18.06:938,18,0
chr10	56961998	.	GT	G	1022.95	PASS	AB=0.694;AC=15;AF=0.268;AN=56;BaseQRankSum=-6.413;DP=514;FS=7.853;HRun=15;HaplotypeScore=76.4934;InbreedingCoeff=0.1158;MQ=66.69;MQ0=7;MQRankSum=0.704;QD=4.51;ReadPosRankSum=0.993;VQSLOD=1.5809;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,1:36:17.49:0,17,433	0/1:1,2:4:15.41:33,0,15	0/0:24,2:14:10.34:0,10,108	0/1:22,0:12:3.76:4,0,40	0/0:8,0:9:17.84:0,18,146	0/1:6,12:18:29.72:91,0,30	0/1:10,5:16:21.43:80,0,21	0/1:27,8:37:80.06:122,0,80	0/0:18,0:18:35.20:0,35,149	0/0:15,0:15:29.54:0,30,123	0/0:12,0:12:25.59:0,26,114	0/1:10,11:22:9.27:74,0,9	0/0:14,0:19:23.47:0,23,164	0/0:11,1:15:19.42:0,19,255	0/0:19,0:19:32.40:0,32,139	0/1:6,13:19:13.26:155,0,13	0/1:9,13:22:43.53:137,0,44	1/1:10,8:17:5.49:140,5,0	0/0:25,0:25:48.36:0,48,200	0/0:8,0:8:21.84:0,22,99	0/0:30,0:30:51.34:0,51,218	1/1:8,11:19:2.92:140,3,0	1/1:3,4:7:8.75:53,9,0	0/1:13,9:20:15.01:153,0,15	0/0:7,0:7:15.39:0,15,63	0/0:17,0:17:36.47:0,36,146	0/0:27,0:25:34.92:0,35,146	0/0:4,0:3:4.72:0,5,17
chr10	56962000	.	T	TTG	2404.15	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=-2.170;DP=533;FS=0.799;HRun=0;HaplotypeScore=88.8541;InbreedingCoeff=0.9218;MQ=65.81;MQ0=7;MQRankSum=3.502;QD=11.23;ReadPosRankSum=4.147;VQSLOD=3.4372;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:86.68:0,87,909	0/0:4,0:4:12.03:0,12,138	0/0:28,0:14:24.37:0,24,307	0/1:28,0:13:2.58:3,0,97	0/0:9,0:9:25.53:0,26,299	0/0:21,0:21:30.54:0,31,334	0/0:16,0:16:43.45:0,43,373	0/0:34,0:34:90.62:0,91,867	1/1:20,1:21:25.87:228,26,0	1/1:12,2:14:37.96:294,38,0	1/1:12,1:13:28.99:219,29,0	0/0:23,0:23:39.49:0,39,376	0/0:19,0:19:44.52:0,45,390	0/0:16,0:16:41.81:0,42,430	1/1:18,1:19:33.90:222,34,0	0/0:21,0:21:45.08:0,45,450	0/0:22,0:22:50.79:0,51,525	0/0:19,0:18:41.78:0,42,427	1/1:23,0:23:52.98:360,53,0	1/1:8,1:9:10.84:120,11,0	1/1:25,4:29:60.74:447,61,0	0/0:19,0:19:52.55:0,53,448	0/0:7,0:7:14.82:0,15,136	0/0:24,0:22:54.08:0,54,551	1/1:7,1:8:16.93:112,17,0	1/1:18,0:18:45.62:336,46,0	1/1:26,1:25:32.03:233,32,0	1/1:5,0:4:5.82:50,6,0
chr10	56962001	.	T	TG	4316.44	PASS	AB=0.571;AC=21;AF=0.375;AN=56;BaseQRankSum=-8.195;DP=532;FS=0.000;HRun=0;HaplotypeScore=72.8865;InbreedingCoeff=0.8781;MQ=65.78;MQ0=6;MQRankSum=2.661;QD=23.08;ReadPosRankSum=4.507;VQSLOD=6.4758;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:78.19:0,78,856	0/0:4,0:4:12:0,12,119	0/0:28,0:14:2.21:0,2,240	0/0:28,0:13:6.95:0,7,94	0/0:9,0:9:26.92:0,27,295	0/0:20,0:20:39.43:0,39,361	0/0:16,0:16:46.44:0,46,361	0/0:33,0:33:90.55:0,91,812	1/1:2,19:21:36.79:442,37,0	1/1:2,12:14:38.92:389,39,0	1/1:2,11:13:18.79:288,19,0	0/0:22,0:22:44.96:0,45,398	0/0:19,0:19:35.03:0,35,329	0/0:16,0:16:36.20:0,36,376	1/1:1,18:19:36.02:409,36,0	0/0:21,0:21:50.97:0,51,441	0/0:22,0:22:50.97:0,51,469	0/0:20,0:19:44.99:0,45,410	1/1:3,20:23:57.84:664,58,0	1/1:2,7:9:16.64:228,17,0	1/1:4,24:29:62.79:649,63,0	0/0:18,0:18:53.76:0,54,444	0/0:7,0:7:14.81:0,15,126	0/0:24,0:22:54.03:0,54,500	1/1:1,7:8:18.01:196,18,0	1/1:1,17:18:51.05:577,51,0	1/1:5,24:27:39.22:412,39,0	0/1:1,3:4:11.31:63,0,11
chr10	56963579	.	A	AATGAG	36463.97	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-14.996;DP=643;FS=8.406;HRun=0;HaplotypeScore=102.2843;InbreedingCoeff=0.9935;MQ=66.96;MQ0=0;MQRankSum=-6.941;QD=79.44;ReadPosRankSum=2.869;VQSLOD=6.9802;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,151,3428	1/1:2,6:10:15.05:498,15,0	0/0:25,0:23:66.22:0,66,1392	0/0:27,0:25:49.19:0,49,1221	0/0:40,0:40:99:0,117,2719	1/1:3,11:15:36.12:1167,36,0	1/1:4,18:23:60.21:1975,60,0	1/1:8,16:28:84.20:2387,84,0	1/1:2,17:23:42.14:1394,42,0	1/1:4,19:25:72.25:2273,72,0	1/1:4,19:28:57.15:1761,57,0	1/1:1,19:22:60.21:1957,60,0	0/0:25,0:25:75.26:0,75,1716	0/0:16,0:16:48.16:0,48,1078	1/1:2,14:19:45.15:1474,45,0	1/1:2,10:18:33.11:1080,33,0	1/1:1,23:25:66.18:2094,66,0	1/1:2,14:16:45.15:1452,45,0	1/1:2,10:18:51.16:1380,51,0	1/1:2,19:24:60.21:1943,60,0	1/1:2,16:22:42.14:1395,42,0	1/1:5,20:28:69.19:2122,69,0	1/1:0,14:15:39.13:1298,39,0	1/1:1,24:26:72.25:2321,72,0	1/1:0,15:18:45.15:1497,45,0	1/1:0,20:23:69.22:2136,69,0	1/1:2,26:28:72.18:2361,72,0	1/1:0,5:5:15.05:499,15,0
chr10	56964266	.	T	TA	4291.14	PASS	AB=0.722;AC=21;AF=0.375;AN=56;BaseQRankSum=-10.049;DP=522;FS=0.760;HRun=11;HaplotypeScore=62.7939;InbreedingCoeff=0.7759;MQ=75.50;MQ0=0;MQRankSum=-2.421;QD=18.74;ReadPosRankSum=-2.035;VQSLOD=5.1493;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:31:82.71:0,83,633	0/0:8,0:8:20.92:0,21,163	0/0:12,0:11:1.21:0,1,84	0/1:15,0:18:17.28:17,0,131	0/0:23,2:26:9.89:0,10,433	0/0:21,0:21:53.78:0,54,418	0/0:22,2:25:25.38:0,25,370	0/0:13,0:14:35.82:0,36,277	1/1:3,19:22:48.10:487,48,0	1/1:2,14:17:47.93:469,48,0	1/1:4,17:22:21.01:428,21,0	0/0:16,0:17:42.92:0,43,313	0/0:8,0:8:23.91:0,24,186	0/0:15,0:16:37.89:0,38,284	0/1:2,8:10:2.20:162,0,2	0/0:10,0:11:31.92:0,32,238	0/0:32,1:34:61.22:0,61,649	0/0:11,0:11:20.89:0,21,160	1/1:1,14:15:42.08:426,42,0	1/1:4,12:16:30.06:305,30,0	1/1:7,11:18:12.89:312,13,0	0/0:19,0:21:45.86:0,46,337	0/0:12,0:13:28.90:0,29,212	0/0:24,0:24:62.75:0,63,488	1/1:5,19:24:48.10:487,48,0	1/1:3,21:24:57.07:563,57,0	0/1:8,14:21:4.43:323,0,4	1/1:8,13:21:12.83:312,13,0
chr10	56964519	.	C	CAAA	6180.73	PASS	AB=0.941;AC=45;AF=0.804;AN=56;BaseQRankSum=0.136;DP=543;FS=0.749;HRun=16;HaplotypeScore=110.2731;InbreedingCoeff=0.7497;MQ=54.04;MQ0=8;MQRankSum=-6.739;QD=13.92;ReadPosRankSum=-3.238;VQSLOD=2.1559;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:31:22.20:0,22,270	1/1:7,0:7:17.97:194,18,0	0/0:14,0:6:8.43:0,8,49	0/0:16,0:10:9.87:0,10,65	0/0:19,0:18:13.70:0,14,133	1/1:24,0:24:44.88:480,45,0	1/1:17,0:16:26.92:293,27,0	1/1:24,0:20:46.17:488,46,0	1/1:10,0:17:9.01:119,9,0	1/1:12,1:22:22.85:190,23,0	1/1:7,1:18:20.93:229,21,0	1/1:13,0:12:19.31:143,19,0	0/1:15,0:15:22.08:26,0,22	0/0:18,0:18:4.31:0,4,76	1/1:32,0:32:65.65:651,66,0	1/1:16,0:15:23.94:244,24,0	1/1:19,0:17:16.52:166,17,0	1/1:21,0:17:35.91:375,36,0	1/1:20,1:20:32.87:318,33,0	1/1:11,3:26:23.92:271,24,0	1/1:9,0:18:11.97:124,12,0	1/1:22,0:21:39.85:343,40,0	1/1:22,0:22:35.89:381,36,0	1/1:14,0:11:9.50:129,10,0	1/1:3,14:20:3:28,3,0	1/1:14,11:28:45.68:514,46,0	1/1:15,0:14:32.96:350,33,0	1/1:5,0:5:14.93:125,15,0
chr10	56964863	.	A	AGG	10875.13	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-13.979;DP=711;FS=24.218;HRun=1;HaplotypeScore=94.6782;InbreedingCoeff=0.9814;MQ=72.63;MQ0=0;MQRankSum=0.636;QD=40.73;ReadPosRankSum=2.940;VQSLOD=3.7471;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,123,1835	1/1:1,15:17:35.86:676,36,0	0/0:23,0:22:48.42:0,48,599	0/0:26,0:23:53.39:0,53,686	0/0:23,0:22:63.15:0,63,969	1/1:0,13:13:17.89:363,18,0	1/1:2,26:28:64.59:1406,65,0	1/1:0,23:24:65.88:965,66,0	0/0:26,0:26:69.19:0,69,1034	0/0:22,0:22:57.17:0,57,857	0/0:24,0:23:60.13:0,60,851	1/1:2,23:25:37.33:905,37,0	0/0:17,0:17:51.09:0,51,772	0/0:29,0:29:75.21:0,75,1163	0/0:28,0:28:63.18:0,63,970	1/1:3,14:17:27.06:806,27,0	1/1:2,27:31:60.21:1213,60,0	1/1:1,18:20:35.68:899,36,0	0/0:18,0:18:54.13:0,54,755	0/0:23,0:23:48.15:0,48,756	0/0:49,0:49:99:0,144,2192	1/1:0,33:34:78.27:1560,78,0	1/1:2,18:20:5.28:623,5,0	1/1:0,36:37:72.25:1457,72,0	0/0:15,0:15:33.10:0,33,511	0/0:35,0:35:99:0,105,1500	0/0:25,0:25:72.20:0,72,1079	0/0:19,0:19:57.02:0,57,724
chr10	56965041	.	GGAGAGAGAGAGA	G	1746.32	PASS	AB=0.950;AC=21;AF=0.389;AN=54;BaseQRankSum=0.585;DP=484;FS=22.925;HRun=0;HaplotypeScore=189.8136;InbreedingCoeff=0.4022;MQ=50.95;MQ0=16;MQRankSum=-6.371;QD=8.73;ReadPosRankSum=0.845;VQSLOD=0.9314;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:32:49.93:0,50,1455	1/1:2,0:4:6.02:87,6,0	./.	0/0:34,0:15:2.45:0,2,13	0/0:24,0:24:27.01:0,27,573	1/1:15,0:15:21.01:265,21,0	1/1:16,0:15:0.93:195,1,0	0/0:15,0:15:6.73:0,7,87	0/0:12,0:11:3.01:0,3,33	0/1:18,0:17:19.25:19,0,113	0/0:15,0:15:0.94:0,1,2	1/1:16,0:16:24.07:356,24,0	0/0:8,0:12:21.07:0,21,536	0/0:21,0:20:27.41:0,27,633	0/0:22,0:22:17.22:0,17,119	1/1:11,0:11:6.02:132,6,0	1/1:12,0:11:15.05:255,15,0	0/1:15,0:13:9.18:147,0,9	0/1:12,0:10:10.11:10,0,55	0/0:11,0:11:11.16:0,11,96	0/0:15,0:14:5.58:0,6,44	0/1:20,10:29:11.10:272,0,11	1/1:18,0:18:9.32:129,9,0	1/1:16,0:16:3.48:36,3,0	0/0:15,0:14:11.98:0,12,115	0/1:17,0:17:17.68:18,0,55	0/0:24,0:24:8.14:0,8,171	0/0:10,0:9:10.09:0,10,53
chr10	56965060	.	G	GAGGA	1338.15	PASS	AB=0.890;AC=12;AF=0.231;AN=52;BaseQRankSum=-0.889;DP=396;FS=13.194;HRun=0;HaplotypeScore=137.5102;InbreedingCoeff=0.0715;MQ=40.76;MQ0=16;MQRankSum=-4.298;QD=8.98;ReadPosRankSum=2.031;VQSLOD=1.7435;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:27:65.64:0,66,1018	0/1:5,0:5:4.57:5,0,21	./.	./.	0/0:25,0:25:30.01:0,30,494	0/1:17,0:17:62.36:201,0,62	0/1:20,0:19:68.48:202,0,68	0/0:26,0:26:34.98:0,35,519	0/0:8,0:7:3.01:0,3,33	0/0:16,0:15:36.77:0,37,262	0/0:9,0:9:9.46:0,9,62	0/1:15,1:16:33.73:342,0,34	0/0:12,0:12:27.09:0,27,436	0/0:16,0:15:23.36:0,23,426	0/0:16,0:16:23.76:0,24,173	1/1:4,1:11:6.02:126,6,0	0/1:13,0:12:90.20:182,0,90	0/1:5,10:13:41.16:92,0,41	0/0:9,0:7:14.95:0,15,132	0/0:8,0:8:14.93:0,15,125	0/0:10,0:9:6.35:0,6,44	0/1:22,0:21:31.04:223,0,31	1/1:9,3:15:9.89:105,10,0	0/1:4,7:15:3.17:3,0,18	0/0:10,0:9:11.98:0,12,115	0/0:10,0:9:8.29:0,8,140	0/0:14,0:14:32.10:0,32,246	0/0:8,0:7:20.46:0,20,154
chr10	56965062	.	G	GGA	650	PASS	AB=0.884;AC=13;AF=0.250;AN=52;BaseQRankSum=1.305;DP=379;FS=11.777;HRun=0;HaplotypeScore=118.6954;InbreedingCoeff=0.1243;MQ=39.86;MQ0=15;MQRankSum=-3.210;QD=4.61;ReadPosRankSum=1.498;VQSLOD=2.3504;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:28:66.16:0,66,944	0/1:5,0:5:1.03:1,0,13	./.	./.	0/0:23,0:23:33.11:0,33,499	0/1:14,3:17:86.74:133,0,87	0/1:17,2:18:99:118,0,156	0/0:28,0:28:46.08:0,46,606	0/0:8,0:7:3.01:0,3,33	0/0:14,0:13:35.03:0,35,283	0/0:8,0:8:8.98:0,9,75	0/1:11,5:16:37.63:170,0,38	0/0:11,0:11:27.06:0,27,368	0/0:16,0:15:20.96:0,21,377	0/0:16,0:16:23.76:0,24,174	1/1:9,1:10:6.01:63,6,0	0/1:10,3:12:81.19:127,0,81	0/1:13,0:11:36.05:36,0,52	0/0:7,0:6:15.03:0,15,156	0/0:8,0:8:14.93:0,15,125	0/0:9,0:8:6.29:0,6,44	0/1:19,4:23:19.76:113,0,20	1/1:11,1:12:3.81:26,4,0	1/1:12,0:12:1.25:3,1,0	0/0:7,0:6:11.98:0,12,115	0/0:10,0:9:26.90:0,27,223	0/0:12,0:12:32.88:0,33,264	0/0:8,0:7:20.47:0,20,157
chr10	56965068	.	GAGAGAGGA	G	1919.53	PASS	AB=1.000;AC=35;AF=0.700;AN=50;BaseQRankSum=6.415;DP=372;FS=2.170;HRun=0;HaplotypeScore=137.1702;InbreedingCoeff=0.4899;MQ=39.05;MQ0=15;MQRankSum=-5.798;QD=8.27;ReadPosRankSum=1.928;VQSLOD=2.6475;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:27:30.17:0,30,1122	0/1:5,0:5:16.71:51,0,17	./.	0/0:17,0:1:2.99:0,3,23	0/0:26,0:25:19.49:0,19,513	1/1:18,0:18:7.57:121,8,0	0/1:20,0:19:60.16:75,0,60	0/0:30,0:29:35.26:0,35,666	./.	1/1:13,0:12:21.04:263,21,0	1/1:6,0:6:9.02:94,9,0	1/1:11,6:17:6.87:247,7,0	0/0:13,0:13:18.18:0,18,438	0/1:15,0:14:2.60:3,0,318	1/1:16,0:16:6.02:72,6,0	1/1:10,0:10:5.08:90,5,0	1/1:12,0:11:10.22:100,10,0	1/1:13,0:11:5.11:55,5,0	1/1:6,0:5:9.03:122,9,0	1/1:7,0:7:3.24:38,3,0	0/0:7,0:7:0.12:0,0,0	1/1:24,0:23:9.87:137,10,0	1/1:11,0:11:7.83:118,8,0	1/1:12,0:12:1.14:3,1,0	./.	1/1:9,0:8:18.05:224,18,0	1/1:10,0:10:9.03:108,9,0	1/1:8,0:7:12.04:160,12,0
chr10	56965074	.	GGA	G	1580.43	PASS	AB=0.885;AC=37;AF=0.712;AN=52;BaseQRankSum=6.792;DP=355;FS=2.075;HRun=0;HaplotypeScore=111.4314;InbreedingCoeff=0.2902;MQ=37.91;MQ0=13;MQRankSum=-5.967;QD=6.30;ReadPosRankSum=0.031;VQSLOD=3.4164;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,1:26:28.93:0,29,732	0/1:5,1:6:28.67:29,0,36	./.	0/0:20,0:2:6:0,6,67	0/1:26,0:25:12.09:12,0,400	1/1:14,4:18:0.50:49,0,0	0/1:15,5:19:13.24:87,0,13	0/0:29,1:27:27.38:0,27,774	1/1:4,6:9:0.47:1,0,0	1/1:3,7:9:23.44:302,23,0	1/1:0,6:6:9.03:105,9,0	1/1:13,3:16:7.49:137,7,0	0/0:13,0:13:13.95:0,14,274	0/1:13,1:13:18.46:18,0,188	1/1:4,13:17:6.02:72,6,0	1/1:8,1:9:4.78:47,5,0	0/1:8,2:10:8.79:44,0,9	1/1:11,0:9:4.47:53,4,0	1/1:1,3:3:9.03:122,9,0	1/1:0,4:4:3.90:38,4,0	0/0:3,0:3:0.47:0,0,1	1/1:19,4:23:11.87:52,12,0	1/1:11,1:12:7.01:64,7,0	1/1:9,0:9:1.14:3,1,0	./.	1/1:4,5:8:18.53:232,19,0	1/1:4,8:12:8.86:108,9,0	1/1:0,4:4:12.04:160,12,0
chr10	56965076	.	AAG	A	1065.11	PASS	AB=0.856;AC=19;AF=0.432;AN=44;BaseQRankSum=4.592;DP=358;FS=0.708;HRun=0;HaplotypeScore=120.6239;InbreedingCoeff=0.1952;MQ=37.90;MQ0=9;MQRankSum=-6.067;QD=5.95;ReadPosRankSum=-1.673;VQSLOD=2.9496;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:56.82:0,57,913	0/0:7,0:7:9.02:0,9,113	./.	0/0:20,0:2:6.01:0,6,77	0/0:26,1:26:37.10:0,37,526	1/1:5,13:18:6.19:288,6,0	1/1:8,11:19:27.80:314,28,0	0/1:30,2:29:15.31:15,0,653	./.	0/1:9,0:9:0:0,0,0	1/1:6,0:6:0.47:1,0,0	0/1:12,4:16:49.17:106,0,49	0/0:13,0:13:16.64:0,17,252	0/0:13,0:12:11.42:0,11,132	./.	0/1:6,3:9:10.38:63,0,10	0/1:7,2:10:11.97:97,0,12	1/1:9,2:9:9.03:103,9,0	./.	0/1:5,0:5:0:0,0,0	0/1:2,0:2:0.13:0,0,0	0/1:16,5:20:57.19:124,0,57	0/1:5,7:12:10.32:66,0,10	1/1:7,2:9:2.98:21,3,0	./.	0/0:10,0:9:3.59:0,4,9	0/0:13,0:13:0.47:0,0,1	./.
chr10	56965125	.	AGAGGAAGAGAGGGTGGGGG	A	9960.67	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=2.380;DP=486;FS=0.472;HRun=0;HaplotypeScore=263.9360;InbreedingCoeff=0.8814;MQ=50.67;MQ0=9;MQRankSum=-7.309;QD=64.26;ReadPosRankSum=3.255;VQSLOD=4.1868;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:78.27:0,78,5345	0/0:13,0:13:33.27:0,33,536	0/0:27,0:6:14.05:0,14,375	0/0:38,0:13:28.33:0,28,1268	0/0:24,0:24:52.05:0,52,3042	0/0:21,0:21:29.82:0,30,1048	0/0:19,0:19:43.86:0,44,833	0/0:22,0:19:40.90:0,41,707	1/1:2,11:13:12.04:530,12,0	1/1:4,10:14:30.53:1233,31,0	1/1:2,18:20:15.05:663,15,0	0/0:17,0:17:12.87:0,13,800	0/0:12,0:12:36.12:0,36,2653	0/0:12,0:13:27.09:0,27,1804	1/1:6,15:21:36.12:1591,36,0	0/0:18,0:19:52.22:0,52,1138	0/0:22,0:22:60.74:0,61,1471	0/0:7,0:7:15.05:0,15,304	0/1:9,0:9:99:939,0,101	1/1:0,12:12:18.06:840,18,0	1/1:1,3:4:6.02:284,6,0	0/0:16,0:16:17.13:0,17,901	0/0:17,0:17:25.85:0,26,926	0/0:15,0:15:33.15:0,33,669	1/1:2,13:15:12.04:557,12,0	1/1:1,13:14:36.11:1581,36,0	1/1:5,16:21:20.30:1001,20,0	1/1:0,12:12:15.05:741,15,0
chr10	56965128	.	GGA	G	2317.26	PASS	AB=0.943;AC=29;AF=0.518;AN=56;BaseQRankSum=8.959;DP=481;FS=4.619;HRun=0;HaplotypeScore=173.5798;InbreedingCoeff=0.2860;MQ=51.09;MQ0=9;MQRankSum=-8.412;QD=7.86;ReadPosRankSum=-1.654;VQSLOD=2.7555;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:28:75.52:0,76,1474	0/1:13,0:13:32.25:32,0,155	0/0:28,0:6:13.92:0,14,127	0/0:37,1:13:14.68:0,15,348	0/0:21,0:21:48.82:0,49,859	0/1:20,1:21:9.90:10,0,501	0/0:17,0:17:10.93:0,11,405	0/1:22,0:19:26.58:27,0,285	1/1:11,2:13:12.02:131,12,0	1/1:10,4:14:28.92:283,29,0	1/1:18,2:20:15.01:135,15,0	0/1:17,0:17:14.43:14,0,289	0/0:12,0:12:36.12:0,36,688	0/0:14,0:14:1.64:0,2,537	1/1:15,6:21:36.08:380,36,0	0/1:19,0:19:66.85:67,0,278	0/0:22,0:22:8.24:0,8,481	0/0:6,0:6:14.63:0,15,161	0/1:1,7:8:32.73:234,0,33	1/1:12,0:12:18.04:187,18,0	1/1:3,1:4:6.01:62,6,0	0/1:18,0:18:25.26:25,0,334	0/1:17,0:17:31.27:31,0,294	0/1:15,0:15:20.65:21,0,241	1/1:13,2:15:12.02:122,12,0	1/1:13,1:14:32.88:359,33,0	1/1:16,4:20:20.86:216,21,0	1/1:12,0:12:15.04:176,15,0
chr10	56965130	.	A	AG	973.03	PASS	AB=0.986;AC=27;AF=0.482;AN=56;BaseQRankSum=4.871;DP=486;FS=6.302;HRun=2;HaplotypeScore=174.8335;InbreedingCoeff=0.0602;MQ=51.27;MQ0=9;MQRankSum=-4.106;QD=3.05;ReadPosRankSum=0.173;VQSLOD=-0.0857;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:27:78.25:0,78,1064	1/1:13,0:13:23.25:117,23,0	0/0:28,0:6:12:0,12,108	0/0:38,0:13:20.23:0,20,269	0/0:20,0:20:52.04:0,52,684	0/1:21,1:22:37.41:59,0,37	0/1:16,0:16:34.54:35,0,71	0/1:20,1:18:19.17:19,0,136	0/0:13,0:13:1.80:0,2,9	0/0:14,0:14:3.80:0,4,30	1/1:20,0:20:9.40:56,9,0	0/1:21,0:21:15.10:204,0,15	0/0:13,0:13:36.12:0,36,501	0/0:14,0:14:35.90:0,36,483	0/1:21,0:21:18.23:21,0,18	0/1:19,1:20:1.04:143,0,1	0/1:23,0:23:36.16:58,0,36	0/1:6,0:6:4.77:5,0,70	0/1:8,0:8:3.92:4,0,37	1/1:12,0:12:9.68:57,10,0	1/1:4,0:4:0.68:12,1,0	0/1:19,1:20:5.15:112,0,5	1/1:15,1:16:23.32:129,23,0	0/1:15,0:15:33.33:41,0,33	0/1:15,0:15:0.99:10,0,1	1/1:14,0:14:1.83:26,2,0	0/1:20,0:20:4.93:19,0,5	1/1:12,0:12:2.23:14,2,0
chr10	56965135	.	AGGGTGGGGG	A	6001.58	PASS	AB=0.520;AC=21;AF=0.375;AN=56;BaseQRankSum=9.769;DP=491;FS=0.000;HRun=0;HaplotypeScore=211.1682;InbreedingCoeff=0.8839;MQ=56.72;MQ0=9;MQRankSum=-6.501;QD=37.98;ReadPosRankSum=2.165;VQSLOD=4.1160;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:72.23:0,72,3118	0/0:13,0:13:35.93:0,36,670	0/0:28,0:7:15.47:0,15,328	0/0:41,0:16:16.42:0,16,1003	0/0:19,0:19:51.18:0,51,2392	0/0:23,0:23:53.44:0,53,1287	0/0:14,0:14:39.13:0,39,871	0/0:21,0:18:48.11:0,48,756	1/1:11,2:13:12.04:321,12,0	1/1:10,4:14:28.04:688,28,0	1/1:18,2:20:15.05:392,15,0	0/0:23,0:23:50.10:0,50,1107	0/0:13,0:13:36.12:0,36,1733	0/0:15,0:15:39.13:0,39,1891	1/1:15,6:21:36.12:967,36,0	0/0:20,0:21:57.46:0,57,1060	0/0:23,0:23:63.21:0,63,1385	0/0:5,0:5:12.04:0,12,315	0/1:1,12:13:49.07:752,0,49	1/1:12,0:12:18.06:490,18,0	1/1:3,1:4:6.02:155,6,0	0/0:19,0:19:48.07:0,48,899	0/0:16,0:16:47.74:0,48,883	0/0:14,0:14:39.13:0,39,772	1/1:13,2:15:12.04:320,12,0	1/1:13,1:14:36.11:937,36,0	1/1:16,4:20:20.26:543,20,0	1/1:12,0:12:15.05:437,15,0
chr10	56965136	.	G	GA	3487.92	PASS	AB=0.556;AC=43;AF=0.768;AN=56;BaseQRankSum=12.032;DP=482;FS=0.950;HRun=1;HaplotypeScore=165.0500;InbreedingCoeff=0.8263;MQ=57.14;MQ0=9;MQRankSum=-9.383;QD=10.20;ReadPosRankSum=3.797;VQSLOD=1.8147;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:69.22:0,69,940	1/1:1,11:12:23.25:224,23,0	0/0:28,0:7:11.18:0,11,110	0/0:41,0:16:32.03:0,32,388	0/0:19,0:19:51.11:0,51,689	1/1:8,13:21:34.28:319,34,0	1/1:1,12:13:35.81:281,36,0	1/1:11,9:17:23.57:205,24,0	1/1:13,0:13:9.27:41,9,0	1/1:14,0:14:17.84:56,18,0	1/1:20,0:20:8.10:22,8,0	1/1:8,14:22:17.60:288,18,0	0/0:13,0:13:39.12:0,39,523	0/0:15,0:15:39.13:0,39,541	1/1:21,0:21:20.79:64,21,0	1/1:6,15:21:48.41:404,48,0	1/1:3,18:22:41.79:392,42,0	0/1:1,4:5:3.25:65,0,3	1/1:13,0:13:9.07:44,9,0	1/1:12,0:12:10.63:29,11,0	1/1:4,0:4:3.28:9,3,0	1/1:5,12:17:29.38:300,29,0	1/1:2,14:16:32.85:305,33,0	1/1:2,13:15:33.35:269,33,0	1/1:15,0:15:7.87:24,8,0	1/1:14,0:14:22.88:77,23,0	1/1:20,0:20:12.55:37,13,0	1/1:12,0:12:10.45:32,10,0
chr10	56965137	.	G	GA	2729.67	PASS	AB=0.617;AC=20;AF=0.357;AN=56;BaseQRankSum=0.441;DP=479;FS=0.865;HRun=0;HaplotypeScore=166.2422;InbreedingCoeff=0.7461;MQ=58.32;MQ0=9;MQRankSum=-2.332;QD=15.00;ReadPosRankSum=1.363;VQSLOD=5.1704;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:69.22:0,69,943	1/1:1,11:12:21.37:221,21,0	0/0:29,0:8:0.96:0,1,110	0/0:41,0:16:26.87:0,27,355	0/0:18,0:18:51.16:0,51,694	1/1:8,13:21:7.34:279,7,0	1/1:1,12:13:28.87:271,29,0	0/1:9,9:17:1.43:192,0,1	0/0:13,0:13:9.40:0,9,35	0/0:14,0:14:15.46:0,15,51	0/0:20,0:20:9.86:0,10,31	1/1:7,14:21:2.13:282,2,0	0/0:12,0:12:36.12:0,36,503	0/0:15,0:15:39.13:0,39,544	0/0:21,0:21:25.08:0,25,80	1/1:6,15:21:56.70:451,57,0	1/1:4,18:22:32.08:378,32,0	0/1:1,4:5:5.04:64,0,5	0/0:13,0:13:13.21:0,13,40	0/0:12,0:12:11.57:0,12,35	0/0:4,0:4:3.93:0,4,13	1/1:5,12:17:9.86:273,10,0	1/1:2,14:16:31.08:287,31,0	1/1:2,13:15:12.57:228,13,0	0/0:15,0:15:8.77:0,9,30	0/0:14,0:14:16.70:0,17,54	0/0:20,0:20:13.52:0,14,44	0/0:12,0:12:10.74:0,11,34
chr10	56965444	.	C	CT	9739.08	PASS	AB=1.000;AC=35;AF=0.625;AN=56;BaseQRankSum=5.204;DP=577;FS=0.757;HRun=6;HaplotypeScore=86.5999;InbreedingCoeff=0.6562;MQ=79.46;MQ0=0;MQRankSum=-4.439;QD=23.19;ReadPosRankSum=5.903;VQSLOD=3.9982;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:30.90:0,31,296	0/0:12,0:12:33.04:0,33,327	0/0:25,0:25:61.57:0,62,608	0/0:19,0:18:13.27:0,13,323	0/0:24,0:24:57.12:0,57,581	0/1:25,0:25:11.32:191,0,11	0/1:23,0:23:40.13:185,0,40	0/0:37,0:37:81.12:0,81,801	1/1:1,22:23:63.20:793,63,0	1/1:2,17:19:54.13:662,54,0	1/1:0,22:22:54.17:678,54,0	0/1:16,0:16:5.17:175,0,5	0/0:11,0:11:27.06:0,27,275	0/0:15,0:15:39.09:0,39,398	1/1:1,16:17:48.15:604,48,0	0/1:8,0:8:3.82:66,0,4	1/1:30,0:30:48.96:337,49,0	0/1:9,0:9:37.16:62,0,37	1/1:4,18:22:26.49:601,26,0	1/1:3,22:25:60.11:719,60,0	1/1:2,22:24:57.18:717,57,0	1/1:23,0:23:52.15:286,52,0	1/1:20,0:20:46.69:292,47,0	1/1:18,0:18:49.07:257,49,0	1/1:1,20:21:60.19:755,60,0	1/1:3,21:24:60.06:755,60,0	1/1:2,27:29:69.22:868,69,0	1/1:3,19:22:60.16:737,60,0
chr10	56965450	.	T	TC	7607.90	PASS	AB=1.000;AC=38;AF=0.679;AN=56;BaseQRankSum=5.074;DP=573;FS=2.048;HRun=4;HaplotypeScore=94.8864;InbreedingCoeff=0.7754;MQ=81.25;MQ0=0;MQRankSum=-4.051;QD=17.99;ReadPosRankSum=7.265;VQSLOD=3.7659;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:15.76:0,16,312	0/0:12,0:12:33.09:0,33,368	0/0:29,0:30:69.51:0,70,756	0/0:16,0:15:4.46:0,4,332	0/0:22,0:22:63.12:0,63,681	1/1:4,22:26:51.17:690,51,0	1/1:4,17:21:48.16:649,48,0	0/0:34,0:34:84.20:0,84,916	1/1:24,0:24:13.84:198,14,0	1/1:20,0:20:6.66:148,7,0	1/1:23,0:23:38.02:260,38,0	1/1:3,14:17:39.12:507,39,0	0/0:11,0:11:33.06:0,33,353	0/0:13,0:13:39.11:0,39,442	1/1:16,0:16:42.84:174,43,0	1/1:1,7:8:18.06:244,18,0	1/1:1,30:31:72.24:974,72,0	1/1:3,6:9:18.06:244,18,0	0/1:21,0:21:42.30:93,0,42	0/1:26,0:26:54.45:216,0,54	1/1:22,0:22:28.93:203,29,0	1/1:0,22:22:60.03:764,60,0	1/1:0,21:21:48.16:638,48,0	1/1:1,19:20:51.17:690,51,0	1/1:22,0:22:8.29:197,8,0	1/1:25,0:25:10.18:149,10,0	1/1:28,0:28:63.96:294,64,0	1/1:21,0:21:39.13:276,39,0
chr10	56965709	.	AGTGTGTGTGT	A	3529.92	PASS	AC=22;AF=0.407;AN=54;BaseQRankSum=7.019;DP=575;FS=0.626;HRun=0;HaplotypeScore=210.6829;InbreedingCoeff=0.8878;MQ=68.99;MQ0=6;MQRankSum=-6.661;QD=19.08;ReadPosRankSum=-0.402;VQSLOD=2.8331;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:51.17:0,51,2076	0/0:10,0:10:12.87:0,13,524	./.	0/0:23,0:16:9.03:0,9,189	0/0:20,0:20:17.06:0,17,806	0/0:15,0:15:21.07:0,21,699	0/0:32,0:32:33.58:0,34,1256	0/0:37,0:37:48.15:0,48,1805	1/1:8,5:15:21.07:587,21,0	1/1:10,6:16:18.05:429,18,0	1/1:15,4:19:8.99:199,9,0	0/0:33,0:33:63.22:0,63,2545	0/0:16,0:16:36.12:0,36,1653	0/0:16,0:16:24.97:0,25,1063	1/1:6,9:15:18.06:537,18,0	0/0:13,0:13:33.10:0,33,1066	0/0:28,0:28:48.16:0,48,1931	0/0:19,0:19:39.10:0,39,1381	1/1:8,3:11:1.16:172,1,0	1/1:10,7:16:15.05:448,15,0	1/1:43,0:43:4.10:46,4,0	0/0:20,0:20:21.07:0,21,793	0/0:13,0:13:24.08:0,24,1027	0/0:25,0:25:39.13:0,39,1556	1/1:11,4:15:9.03:269,9,0	1/1:10,5:15:12.01:237,12,0	1/1:7,2:10:9.03:249,9,0	1/1:3,6:9:12.04:358,12,0
chr10	56965723	.	T	TGTGA	785.19	PASS	AB=0.804;AC=2;AF=0.036;AN=56;BaseQRankSum=-7.988;DP=633;FS=20.782;HRun=0;HaplotypeScore=173.5219;InbreedingCoeff=0.2301;MQ=56.21;MQ0=16;MQRankSum=-1.027;QD=16.36;ReadPosRankSum=-1.791;VQSLOD=1.7642;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:36:80.91:0,81,836	0/1:5,8:14:8.93:231,0,9	0/0:42,0:16:32.65:0,33,322	0/0:32,0:12:32.77:0,33,308	0/0:22,0:20:38.90:0,39,411	0/0:19,0:19:53.90:0,54,531	0/0:28,0:28:63.59:0,64,744	0/1:34,0:34:6.06:643,0,6	0/0:16,0:16:38.95:0,39,360	0/0:17,0:17:44.99:0,45,416	0/0:16,0:16:17.92:0,18,153	0/0:32,0:32:92.33:0,92,1261	0/0:17,0:17:50.88:0,51,628	0/0:20,0:20:50.88:0,51,570	0/0:16,0:16:24.04:0,24,240	0/0:17,0:17:48.01:0,48,548	0/0:26,0:26:74.76:0,75,911	0/0:20,0:20:51.46:0,51,615	0/0:12,0:11:24:0,24,195	0/0:19,0:18:35.95:0,36,334	0/0:49,0:49:41.94:0,42,492	0/0:23,0:23:53.87:0,54,547	0/0:17,0:17:42.03:0,42,517	0/0:26,0:25:53.90:0,54,754	0/0:20,0:20:47.92:0,48,412	0/0:25,0:25:65.89:0,66,564	0/0:9,0:9:26.94:0,27,233	0/0:8,0:8:14.29:0,14,144
chr10	56966153	.	GAAA	G	8285.50	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=3.066;DP=652;FS=16.090;HRun=13;HaplotypeScore=125.9820;InbreedingCoeff=0.9996;MQ=66.68;MQ0=3;MQRankSum=-1.769;QD=27.44;ReadPosRankSum=4.121;VQSLOD=2.3779;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:35:93.25:0,93,1604	1/1:0,9:9:27.08:328,27,0	0/0:24,0:17:30.03:0,30,454	0/0:17,0:16:29.83:0,30,378	0/0:31,0:39:96.22:0,96,1551	0/0:7,0:25:56.87:0,57,553	0/0:3,0:17:39.61:0,40,306	1/1:11,15:26:42:510,42,0	1/1:4,15:19:39.07:474,39,0	1/1:9,34:44:99:1175,99,0	1/1:2,15:17:39.11:474,39,0	0/0:6,0:17:41.91:0,42,389	0/0:13,0:17:48.14:0,48,811	0/0:19,0:20:54.18:0,54,983	1/1:4,22:26:66.16:801,66,0	0/0:3,0:21:53.82:0,54,446	0/0:2,0:16:37.11:0,37,278	0/0:6,0:21:56.24:0,56,465	1/1:3,20:24:58.43:699,58,0	1/1:4,24:29:52.47:653,52,0	1/1:5,13:18:33.07:401,33,0	0/0:7,0:30:79.02:0,79,674	0/0:6,0:30:64.01:0,64,499	0/0:5,0:19:34.14:0,34,274	1/1:3,25:29:67.55:836,68,0	1/1:3,20:23:60.14:730,60,0	1/1:2,16:18:48.12:584,48,0	1/1:0,20:20:51.16:620,51,0
chr10	56966272	.	T	TG	10781.88	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=11.634;DP=620;FS=19.777;HRun=0;HaplotypeScore=70.4591;InbreedingCoeff=0.9987;MQ=76.36;MQ0=3;MQRankSum=-1.654;QD=43.13;ReadPosRankSum=2.454;VQSLOD=3.0417;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,141,1935	0/0:6,0:6:18.06:0,18,252	0/0:21,0:18:48.15:0,48,643	0/0:25,0:22:60.12:0,60,786	0/0:18,0:18:54.14:0,54,733	0/0:22,0:22:63.21:0,63,881	0/0:17,0:17:51.17:0,51,713	0/0:29,0:28:81.26:0,81,1119	1/1:0,24:24:72.25:1151,72,0	1/1:1,20:21:60.18:906,60,0	1/1:0,24:24:69.24:1103,69,0	0/0:19,0:19:54.14:0,54,733	0/0:11,0:11:33.11:0,33,462	0/0:14,0:14:42.14:0,42,586	1/1:2,21:23:60.20:959,60,0	0/0:10,0:10:30.09:0,30,403	0/0:28,0:28:84.28:0,84,1174	0/0:22,0:22:66.18:0,66,884	1/1:3,17:19:51.17:816,51,0	1/1:0,14:14:42.14:671,42,0	1/1:2,31:33:90.31:1439,90,0	0/0:22,0:22:62.87:0,63,881	0/0:23,0:23:69.21:0,69,931	0/0:34,0:34:99:0,102,1426	1/1:0,22:22:54.18:863,54,0	1/1:0,24:24:72.25:1148,72,0	1/1:0,19:19:50.93:815,51,0	1/1:0,26:26:57.19:911,57,0
chr10	56967192	.	TACACACAC	T	6236.88	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=10.631;DP=468;FS=9.077;HRun=0;HaplotypeScore=138.2093;InbreedingCoeff=0.9321;MQ=75.93;MQ0=3;MQRankSum=-11.007;QD=43.61;ReadPosRankSum=0.684;VQSLOD=4.0841;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:48:99:0,105,4156	1/1:6,0:6:3.01:46,3,0	0/0:40,0:32:48.16:0,48,1749	0/0:25,0:20:21.07:0,21,793	0/0:17,0:17:36.12:0,36,1515	0/0:16,0:16:36.12:0,36,1523	0/0:19,0:19:48.16:0,48,1712	0/0:14,0:14:9.03:0,9,316	1/1:3,6:9:18.06:473,18,0	1/1:2,12:14:36.11:864,36,0	1/1:4,9:13:21.03:493,21,0	0/0:11,0:11:30.10:0,30,1265	0/0:13,0:13:36.12:0,36,1470	0/0:9,0:10:24.06:0,24,849	1/1:5,13:18:36.09:888,36,0	0/0:12,0:12:24.05:0,24,909	0/0:20,0:20:42.14:0,42,1641	0/0:14,0:14:19.30:0,19,916	1/1:6,4:10:12.02:259,12,0	1/1:4,11:15:20.98:434,21,0	1/1:8,5:13:3.01:79,3,0	0/0:21,0:21:54.19:0,54,2124	0/0:16,0:16:29.76:0,30,1268	0/0:27,0:27:42.14:0,42,1771	1/1:2,11:13:27.09:709,27,0	1/1:5,12:17:42.08:989,42,0	1/1:0,7:7:21.07:552,21,0	1/1:1,5:8:18.06:450,18,0
chr10	56967243	.	C	CCACA	6603.07	PASS	AB=0.696;AC=41;AF=0.732;AN=56;BaseQRankSum=1.555;DP=618;FS=1.916;HRun=0;HaplotypeScore=177.5923;InbreedingCoeff=0.7188;MQ=63.15;MQ0=25;MQRankSum=-3.859;QD=16.55;ReadPosRankSum=0.060;VQSLOD=4.7923;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:48.70:0,49,904	0/0:6,0:5:3:0,3,26	0/0:62,0:24:6.02:0,6,85	0/0:57,0:28:2.96:0,3,77	0/0:17,0:17:14.94:0,15,395	1/1:11,7:20:12.01:239,12,0	1/1:13,4:20:16.83:249,17,0	1/1:4,0:4:11.94:111,12,0	1/1:8,0:16:2.89:52,3,0	1/1:21,0:20:38.75:415,39,0	1/1:17,0:17:9.01:105,9,0	1/1:7,5:12:14.79:291,15,0	0/0:14,0:14:30.07:0,30,426	0/0:10,0:10:24.08:0,24,370	1/1:24,0:25:15.03:205,15,0	1/1:3,13:16:30.10:723,30,0	1/1:2,14:17:30.10:686,30,0	0/1:9,6:16:13.98:402,0,14	1/1:16,0:15:8.88:58,9,0	1/1:18,0:20:9.03:130,9,0	1/1:21,0:18:6.47:63,6,0	1/1:6,11:22:10.62:396,11,0	1/1:9,10:22:9.62:422,10,0	1/1:10,14:29:40.21:764,40,0	1/1:21,0:21:18.05:272,18,0	1/1:29,0:25:35.90:493,36,0	1/1:16,0:18:29.76:294,30,0	1/1:12,0:12:26.81:233,27,0
chr10	56967626	.	AAACAACAACAACAAC	A	10768.55	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=2.942;DP=729;FS=9.193;HRun=0;HaplotypeScore=316.2258;InbreedingCoeff=0.9823;MQ=70.12;MQ0=2;MQRankSum=-6.454;QD=46.22;ReadPosRankSum=0.411;VQSLOD=3.1295;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,111,5956	1/1:0,10:10:21.07:706,21,0	0/0:27,0:21:18.06:0,18,751	0/0:39,0:34:60.14:0,60,1949	0/0:17,0:19:42.14:0,42,2057	1/1:2,26:28:33.11:1390,33,0	1/1:3,22:25:24.08:1014,24,0	1/1:15,12:27:33.11:619,33,0	0/0:40,0:40:30.67:0,31,592	0/0:33,0:33:75.16:0,75,1179	0/0:23,0:23:39.04:0,39,441	1/1:2,18:20:33.32:1395,33,0	0/0:21,0:21:57.20:0,57,3585	0/0:32,0:32:87.28:0,87,4679	0/0:50,0:50:78.06:0,78,904	1/1:1,20:21:24.08:1014,24,0	1/1:7,10:17:12.04:507,12,0	1/1:6,11:16:22.88:814,23,0	0/0:15,0:15:32.90:0,33,423	0/0:22,0:22:48.10:0,48,875	0/0:39,0:39:41.38:0,41,695	1/1:4,20:24:48.12:1726,48,0	1/1:5,14:19:16.76:724,17,0	1/1:7,18:25:24.08:859,24,0	0/0:18,0:17:27.02:0,27,359	0/0:28,0:28:50.84:0,51,720	0/0:37,0:37:62.96:0,63,617	0/0:10,0:10:9:0,9,79
chr10	56967652	.	ACAACAACAG	A	14931.64	PASS	AB=1.000;AC=34;AF=0.607;AN=56;BaseQRankSum=17.867;DP=794;FS=6.428;HRun=0;HaplotypeScore=254.5173;InbreedingCoeff=0.3561;MQ=55.83;MQ0=7;MQRankSum=-8.207;QD=26.29;ReadPosRankSum=9.160;VQSLOD=2.6216;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:49:99:0,144,4520	1/1:11,0:11:0.06:221,0,0	0/0:27,0:22:66.17:0,66,1209	0/0:38,0:32:90.01:0,90,1551	0/0:29,0:29:84.01:0,84,1696	0/1:34,0:34:99:439,0,119	0/1:32,0:32:99:311,0,164	0/0:20,0:20:44.63:0,45,329	1/1:2,38:40:51.17:1522,51,0	1/1:2,42:43:84.01:1643,84,0	1/1:2,27:29:40.77:910,41,0	1/1:19,0:19:11.04:479,11,0	0/0:30,0:30:89.47:0,89,2790	0/0:32,0:32:93.25:0,93,3369	1/1:1,42:43:65.22:1860,65,0	0/1:23,0:23:28.88:332,0,29	0/1:16,0:15:69.90:155,0,70	0/1:17,0:16:53.89:246,0,54	1/1:13,4:16:38.54:605,39,0	1/1:1,25:25:62.46:737,62,0	1/1:2,39:41:23.95:365,24,0	0/1:26,0:26:93.74:533,0,94	0/1:22,0:22:99:197,0,133	0/1:28,0:28:99:216,0,136	1/1:0,20:20:21.07:539,21,0	1/1:1,29:30:87:1619,87,0	1/1:1,34:35:57.11:1724,57,0	1/1:1,14:15:9.03:278,9,0
chr10	56968563	.	A	AT	698.30	PASS	AB=1.000;AC=6;AF=0.107;AN=56;BaseQRankSum=-2.804;DP=420;FS=0.694;HRun=9;HaplotypeScore=57.6062;InbreedingCoeff=0.6741;MQ=70.89;MQ0=2;MQRankSum=-0.846;QD=9.84;ReadPosRankSum=-2.751;VQSLOD=1.4889;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:22:56.02:0,56,475	1/1:0,1:8:19.89:99,20,0	0/1:20,0:16:0.59:1,0,116	0/1:11,0:8:6.51:7,0,42	0/0:15,0:15:38.99:0,39,339	0/0:24,0:24:65.78:0,66,559	0/0:14,0:15:38.03:0,38,319	1/1:12,20:31:66.14:716,66,0	0/0:13,0:13:29.98:0,30,260	0/0:15,0:15:35.98:0,36,313	0/0:5,0:5:15:0,15,130	0/0:8,0:8:20.99:0,21,182	0/0:13,0:13:26.96:0,27,230	0/0:7,0:7:17.99:0,18,156	0/0:20,0:20:41.98:0,42,365	0/0:12,0:12:17.98:0,18,156	0/0:18,0:19:43.98:0,44,365	0/0:3,0:3:6:0,6,52	0/0:25,0:25:23.53:0,24,347	0/0:12,0:13:35.02:0,35,293	0/0:12,0:12:32.99:0,33,286	0/0:15,0:15:26.98:0,27,234	0/0:15,0:15:37.55:0,38,317	0/0:11,0:11:26.99:0,27,234	0/0:14,0:14:23.96:0,24,208	0/0:16,0:16:44.99:0,45,391	0/0:24,0:24:65.98:0,66,570	0/0:12,0:12:29.99:0,30,260
chr10	56968701	.	CCCTTT	C	5357.76	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=5.463;DP=362;FS=16.210;HRun=0;HaplotypeScore=72.6096;InbreedingCoeff=0.7231;MQ=70.67;MQ0=16;MQRankSum=-5.759;QD=25.64;ReadPosRankSum=2.659;VQSLOD=3.0083;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:45.15:0,45,1283	1/1:3,5:8:9.03:167,9,0	0/0:47,0:28:36.08:0,36,807	0/0:41,0:17:8.27:0,8,444	0/0:19,0:18:46.40:0,46,1277	1/1:10,7:17:21.07:390,21,0	1/1:6,5:11:6.02:112,6,0	1/1:9,4:13:12:178,12,0	1/1:3,5:8:12.04:223,12,0	1/1:4,6:10:18.06:335,18,0	1/1:4,2:6:6.02:111,6,0	1/1:0,6:6:15.05:279,15,0	0/0:14,0:14:33.11:0,33,915	0/0:8,0:8:9.03:0,9,257	1/1:1,3:4:9.03:167,9,0	1/1:2,11:13:30.10:558,30,0	1/1:7,12:19:27.02:464,27,0	1/1:4,3:7:3.01:56,3,0	1/1:5,0:4:3.01:49,3,0	1/1:2,2:4:3.01:56,3,0	1/1:3,0:3:3.01:56,3,0	1/1:1,6:7:15.05:279,15,0	1/1:5,12:17:30.10:558,30,0	1/1:9,14:23:24.08:446,24,0	1/1:1,5:6:15.05:279,15,0	1/1:0,2:2:6.02:107,6,0	1/1:6,9:15:24.08:430,24,0	1/1:3,2:5:3.01:56,3,0
chr10	56968792	.	AGG	A	2873.46	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=5.410;DP=305;FS=0.699;HRun=4;HaplotypeScore=52.4617;InbreedingCoeff=0.8598;MQ=70.84;MQ0=12;MQRankSum=-1.704;QD=16.05;ReadPosRankSum=3.582;VQSLOD=0.3748;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:42.58:0,43,359	0/0:6,0:6:17.97:0,18,151	0/0:24,0:9:17.20:0,17,218	0/0:35,0:9:22.18:0,22,172	0/0:14,0:14:29.99:0,30,259	1/1:13,0:13:32.85:257,33,0	1/1:13,2:14:35.53:291,36,0	0/0:8,0:8:23.93:0,24,198	1/1:13,0:13:14.98:124,15,0	1/1:10,0:10:29.55:243,30,0	1/1:5,0:5:5.99:50,6,0	1/1:8,0:8:14.93:117,15,0	0/0:11,0:11:32.91:0,33,273	0/0:8,0:8:14.97:0,15,128	1/1:7,0:7:3:25,3,0	1/1:10,1:11:27.64:207,28,0	1/1:11,0:11:26.70:185,27,0	1/1:7,0:7:20.85:154,21,0	1/1:3,0:3:5.95:44,6,0	1/1:11,0:11:17.92:140,18,0	1/1:5,0:3:2.99:23,3,0	1/1:16,0:16:44.77:361,45,0	1/1:13,0:13:35.76:272,36,0	1/1:8,0:7:14.91:114,15,0	1/1:13,0:13:29.91:240,30,0	1/1:1,6:7:20.90:169,21,0	1/1:3,0:3:8.90:62,9,0	0/0:4,0:2:0.89:0,1,2
chr10	56968876	.	AATGTATGTATTGTATGTATGTATGT	A	1342.99	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=2.049;DP=290;FS=18.881;HRun=0;HaplotypeScore=177.1695;InbreedingCoeff=0.4787;MQ=56.00;MQ0=2;MQRankSum=-5.284;QD=12.32;ReadPosRankSum=0.000;VQSLOD=1.4935;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:48.16:0,48,2268	0/0:0,0:7:9.03:0,9,180	0/0:21,0:17:28.17:0,28,952	0/0:19,0:14:37.37:0,37,1045	0/0:26,0:26:66.23:0,66,5240	1/1:2,3:5:3.01:195,3,0	1/1:6,0:6:11.77:149,12,0	0/1:21,0:19:99:144,0,363	0/0:11,0:11:27.09:0,27,1215	0/1:6,0:6:56.25:56,0,317	0/0:4,0:4:6.02:0,6,308	1/1:6,1:7:8.99:162,9,0	0/0:23,0:23:60.21:0,60,5965	0/0:14,0:14:42.13:0,42,4087	0/0:8,0:7:18.06:0,18,859	1/1:2,5:7:12:261,12,0	1/1:4,16:19:7.75:45,8,0	1/1:1,7:8:3.01:199,3,0	0/1:7,0:7:99:101,0,265	0/0:11,0:11:21.54:0,22,1064	0/0:5,0:5:3.01:0,3,178	1/1:5,0:5:5.98:59,6,0	1/1:3,4:7:11.69:125,12,0	0/1:6,0:6:0:0,0,0	0/0:3,0:3:9.03:0,9,416	0/1:4,0:4:26.87:27,0,402	0/0:3,0:3:6.02:0,6,296	0/0:3,0:4:6.02:0,6,271
chr10	56968877	.	ATGTATGTAT	A	3764.81	PASS	AB=1.000;AC=43;AF=0.768;AN=56;BaseQRankSum=5.185;DP=289;FS=31.104;HRun=0;HaplotypeScore=98.5954;InbreedingCoeff=0.6733;MQ=56.06;MQ0=3;MQRankSum=-10.241;QD=23.24;ReadPosRankSum=-3.766;VQSLOD=-0.2230;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:48.63:0,49,715	1/1:7,0:7:9.03:206,9,0	0/0:21,0:17:30.10:0,30,509	0/0:18,0:14:34.73:0,35,549	0/0:26,0:26:66.22:0,66,994	1/1:5,0:5:3.01:63,3,0	1/1:6,0:6:11.71:128,12,0	1/1:21,0:19:45.15:586,45,0	1/1:1,10:11:25.83:612,26,0	1/1:1,4:5:15.05:286,15,0	1/1:1,3:4:5.93:40,6,0	1/1:7,0:7:6.02:77,6,0	0/0:23,0:23:60.21:0,60,2441	0/0:14,0:14:42.13:0,42,1710	1/1:1,7:7:17.78:320,18,0	1/1:7,0:7:0.47:1,0,0	1/1:19,0:19:3.01:37,3,0	1/1:8,0:8:3.01:67,3,0	1/1:2,5:7:15.05:292,15,0	1/1:1,10:11:20.47:273,20,0	1/1:0,5:5:2.92:17,3,0	1/1:5,0:5:3.01:39,3,0	1/1:7,0:7:2.74:12,3,0	0/1:5,0:5:0:0,0,0	1/1:0,3:3:8.99:191,9,0	1/1:0,4:4:12.04:302,12,0	1/1:0,3:3:5.94:41,6,0	1/1:1,3:4:6.02:175,6,0
chr10	56968885	.	AT	A	1635.58	PASS	AC=38;AF=0.731;AN=52;BaseQRankSum=8.045;DP=274;FS=36.212;HRun=2;HaplotypeScore=71.0105;InbreedingCoeff=0.7068;MQ=55.38;MQ0=7;MQRankSum=-9.876;QD=12.12;ReadPosRankSum=-4.660;VQSLOD=-0.5674;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,1:23:44.18:0,44,496	1/1:7,0:7:8.39:38,8,0	0/0:15,0:13:30.57:0,31,447	0/0:18,0:13:35.91:0,36,513	0/0:28,0:28:53.44:0,53,264	1/1:3,0:3:2.80:13,3,0	1/1:0,6:6:11.71:128,12,0	1/1:4,18:18:45.15:583,45,0	1/1:11,0:11:20.80:121,21,0	1/1:5,0:5:14.71:137,15,0	1/1:3,0:3:5.93:40,6,0	1/1:2,4:6:6.02:77,6,0	0/0:25,0:25:72.19:0,72,1033	0/0:15,0:15:45.14:0,45,653	1/1:7,1:7:17.40:106,17,0	./.	1/1:17,0:17:2.97:20,3,0	1/1:7,0:7:2.68:11,3,0	1/1:5,0:5:14.71:144,15,0	1/1:11,0:11:20.51:139,21,0	0/0:5,0:5:1.25:0,1,3	1/1:0,3:3:3.01:39,3,0	1/1:4,3:7:2.74:12,3,0	./.	1/1:3,0:3:8.83:56,9,0	1/1:4,0:4:11.53:79,12,0	1/1:3,0:3:5.94:41,6,0	1/1:4,0:4:5.64:26,6,0
chr10	56968886	.	TTGTA	T	1797.41	PASS	AB=1.000;AC=21;AF=0.457;AN=46;BaseQRankSum=5.608;DP=285;FS=4.090;HRun=0;HaplotypeScore=83.3299;InbreedingCoeff=0.1125;MQ=52.48;MQ0=7;MQRankSum=-1.777;QD=11.30;ReadPosRankSum=2.840;VQSLOD=2.7011;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:12,10:23:20.82:328,21,0	1/1:7,0:7:9.01:83,9,0	0/1:14,0:12:0:0,0,0	./.	1/1:2,26:28:66.22:1032,66,0	1/1:3,0:3:2.99:24,3,0	0/0:6,0:6:0.47:0,0,1	0/0:22,0:18:3:0,3,25	0/1:13,0:13:39.86:128,0,40	0/1:9,0:9:33.35:33,0,137	0/0:6,0:6:8.92:0,9,77	./.	0/0:24,0:24:60.21:0,60,1393	0/0:15,0:15:36.12:0,36,851	0/1:8,0:7:38.07:56,0,38	./.	0/1:16,0:17:0:0,0,0	1/1:7,0:7:3:28,3,0	0/1:6,0:6:29.89:42,0,30	0/1:11,0:11:28.79:29,0,74	0/0:6,0:6:3.01:0,3,40	./.	0/0:7,0:7:0.47:0,0,1	./.	0/1:4,0:4:10.02:38,0,10	0/1:5,0:5:26.78:65,0,27	0/0:5,0:5:5.90:0,6,37	1/1:4,0:4:6:51,6,0
chr10	56969973	.	GATC	G	9895.17	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=1.785;DP=537;FS=1.469;HRun=0;HaplotypeScore=106.6285;InbreedingCoeff=0.9839;MQ=79.93;MQ0=0;MQRankSum=-2.704;QD=44.77;ReadPosRankSum=2.104;VQSLOD=6.8201;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,114,2577	0/0:8,0:8:24.07:0,24,490	0/0:18,0:18:51.17:0,51,1112	0/0:11,0:11:29.89:0,30,616	0/0:34,0:34:96.29:0,96,2102	0/0:16,0:16:48.16:0,48,1101	0/0:19,0:19:51.18:0,51,1171	0/0:18,0:18:54.18:0,54,1204	1/1:0,16:16:45.15:767,45,0	1/1:1,23:24:63.20:1044,63,0	1/1:0,14:14:36.12:612,36,0	0/0:8,0:8:21.07:0,21,484	0/0:16,0:16:48.15:0,48,1060	0/0:10,0:10:30.10:0,30,670	1/1:2,20:22:54.18:917,54,0	0/0:12,0:12:36.12:0,36,828	0/0:27,0:27:72.19:0,72,1639	0/0:17,0:17:51.18:0,51,1173	1/1:4,22:26:66.19:1064,66,0	1/1:1,25:26:6.06:1156,6,0	1/1:1,18:19:54.18:920,54,0	0/0:22,0:22:66.21:0,66,1475	0/0:23,0:23:63.05:0,63,1440	0/0:18,0:18:51.18:0,51,1176	1/1:0,15:15:36.12:613,36,0	1/1:0,23:23:69.24:1176,69,0	1/1:0,23:23:66.23:1123,66,0	1/1:1,12:13:30.10:503,30,0
chr10	56969996	.	TA	T	5612.72	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=2.107;DP=556;FS=2.072;HRun=2;HaplotypeScore=101.9217;InbreedingCoeff=0.9978;MQ=87.56;MQ0=0;MQRankSum=-2.130;QD=34.65;ReadPosRankSum=2.941;VQSLOD=4.9927;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,114,1648	0/0:6,0:6:18.06:0,18,270	0/0:21,0:21:58.98:0,59,785	0/0:19,0:19:41.75:0,42,679	0/0:30,0:30:84.27:0,84,1229	1/1:1,16:17:48.16:623,48,0	1/1:1,18:19:45.15:584,45,0	0/0:25,0:25:75.25:0,75,1104	0/0:19,0:19:54.18:0,54,794	0/0:19,0:19:54.18:0,54,809	0/0:17,0:17:48.16:0,48,719	1/1:0,11:11:30.10:389,30,0	0/0:19,0:19:57.18:0,57,833	0/0:7,0:7:21.07:0,21,315	0/0:24,0:24:69.22:0,69,1013	1/1:0,9:9:27.09:351,27,0	1/1:0,26:26:69.20:896,69,0	1/1:1,17:18:51.17:660,51,0	0/0:31,0:31:90.30:0,90,1326	0/0:25,1:26:33.28:0,33,988	0/0:21,0:21:54.18:0,54,809	1/1:0,22:22:57.19:740,57,0	1/1:0,22:22:60.19:779,60,0	1/1:3,15:18:46.96:590,47,0	0/0:15,0:15:39.13:0,39,583	0/0:19,0:19:57.19:0,57,854	0/0:24,0:24:72.19:0,72,1021	0/0:14,0:14:36.09:0,36,498
chr10	56970109	.	GA	G	906.65	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.512;DP=521;FS=1.384;HRun=7;HaplotypeScore=50.7241;InbreedingCoeff=0.9968;MQ=80.58;MQ0=0;MQRankSum=-0.654;QD=23.25;ReadPosRankSum=-2.072;VQSLOD=2.7821;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:69.19:0,69,852	1/1:0,13:13:39.09:398,39,0	0/0:18,0:18:32.09:0,32,341	0/0:16,0:14:23.28:0,23,251	0/0:25,0:25:69.22:0,69,867	0/0:17,0:17:51.16:0,51,642	0/0:20,0:20:60.14:0,60,703	1/1:4,22:26:66.04:630,66,0	0/0:13,0:13:36.12:0,36,452	0/0:22,0:22:54.16:0,54,652	0/0:14,0:14:33.10:0,33,403	0/0:9,0:9:24.08:0,24,301	0/0:20,0:20:51.12:0,51,623	0/0:14,0:14:42.13:0,42,517	0/0:17,0:17:42.13:0,42,526	0/0:21,0:21:60.18:0,60,744	0/0:18,0:20:56.91:0,57,669	0/0:13,0:13:38.96:0,39,422	0/0:20,0:20:60.17:0,60,722	0/0:15,0:15:36.12:0,36,453	0/0:12,0:12:33.08:0,33,389	0/0:20,0:20:57.13:0,57,698	0/0:21,0:21:60.11:0,60,722	0/0:25,0:25:69.21:0,69,856	0/0:21,0:21:60.19:0,60,753	0/0:28,0:28:78.24:0,78,965	0/0:25,0:25:72.22:0,72,887	0/0:11,0:11:30.10:0,30,377
chr10	56970289	.	GTTTTC	G	2755.73	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=6.991;DP=423;FS=19.247;HRun=0;HaplotypeScore=83.0811;InbreedingCoeff=0.9083;MQ=66.74;MQ0=16;MQRankSum=-1.217;QD=25.75;ReadPosRankSum=0.976;VQSLOD=1.9195;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:33:63.15:0,63,1732	0/0:0,0:7:18.05:0,18,233	0/0:21,1:11:13.09:0,13,169	0/0:21,0:8:9.01:0,9,139	0/0:17,0:17:36.12:0,36,951	0/0:9,0:9:21.06:0,21,476	0/0:13,0:12:27.08:0,27,668	0/0:15,0:31:30.26:0,30,342	1/1:0,7:7:18.06:341,18,0	1/1:5,2:7:9.01:129,9,0	1/1:1,8:9:20.99:325,21,0	0/0:11,0:11:8.27:0,8,481	0/0:7,0:7:11.97:0,12,243	0/0:7,0:7:18.06:0,18,515	1/1:3,7:10:12.04:222,12,0	0/0:14,0:14:33.07:0,33,744	0/0:38,0:34:80.93:0,81,2060	0/0:29,0:27:50.40:0,50,1223	1/1:9,8:17:23.92:280,24,0	1/1:4,2:6:14.99:185,15,0	1/1:5,3:8:6.02:114,6,0	0/0:12,0:12:24.08:0,24,654	0/0:9,0:9:15.03:0,15,367	0/0:31,0:30:66.19:0,66,1699	1/1:2,7:9:18.06:341,18,0	1/1:3,13:16:36.04:634,36,0	1/1:5,9:14:18.06:342,18,0	1/1:3,1:4:3.01:57,3,0
chr10	56970398	.	GTT	G	2285.44	PASS	AB=0.706;AC=38;AF=0.704;AN=54;BaseQRankSum=0.927;DP=286;FS=6.136;HRun=14;HaplotypeScore=38.9147;InbreedingCoeff=0.7058;MQ=65.22;MQ0=18;MQRankSum=0.867;QD=13.21;ReadPosRankSum=4.152;VQSLOD=1.5565;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:21:53.58:0,54,652	0/0:1,0:6:12.48:0,12,43	0/0:29,0:9:11.20:0,11,84	0/0:19,0:4:5.54:0,6,50	0/0:11,0:13:29.50:0,29,316	1/1:1,5:6:12.01:111,12,0	1/1:1,2:4:8.75:67,9,0	0/0:7,0:13:19.96:0,20,70	1/1:0,4:4:9.01:83,9,0	1/1:1,5:6:15:139,15,0	1/1:6,7:11:2.82:173,3,0	0/1:5,3:8:4.93:71,0,5	0/0:7,0:6:9.01:0,9,94	./.	1/1:1,7:7:14.94:129,15,0	1/1:1,3:5:11.71:95,12,0	1/1:8,10:20:32.41:269,32,0	1/1:3,8:11:27.01:246,27,0	1/1:2,1:9:10.97:65,11,0	0/1:7,1:11:2.97:58,0,3	1/1:2,0:3:5.49:24,5,0	1/1:3,2:5:8.86:76,9,0	1/1:2,6:8:20.95:183,21,0	1/1:1,3:5:5.62:86,6,0	1/1:3,8:11:20.68:194,21,0	1/1:3,4:8:14.44:107,14,0	1/1:2,0:7:13.71:59,14,0	1/1:3,11:15:26.77:234,27,0
chr10	56970411	.	TTA	T	115.26	PASS	AB=0.974;AC=18;AF=0.333;AN=54;BaseQRankSum=4.473;DP=254;FS=6.959;HRun=0;HaplotypeScore=42.1590;InbreedingCoeff=0.1870;MQ=62.56;MQ0=9;MQRankSum=0.143;QD=1.07;ReadPosRankSum=5.208;VQSLOD=0.1481;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:23:63:0,63,829	0/0:8,0:8:23.49:0,23,153	0/0:24,0:6:11.44:0,11,81	0/0:15,1:4:0.60:0,1,21	0/0:13,0:13:35.98:0,36,456	1/1:5,1:6:5.60:13,6,0	0/1:4,0:4:2.96:5,0,3	0/0:14,0:8:21.49:0,21,109	1/1:4,0:4:5.66:17,6,0	0/0:6,0:6:3:0,3,29	0/1:8,0:8:8.23:8,0,24	0/1:6,0:6:4.62:5,0,35	0/0:4,0:4:12.01:0,12,149	./.	0/1:8,0:8:3.15:3,0,17	0/1:4,0:4:1.50:8,0,2	0/1:14,1:14:10.03:57,0,10	1/1:10,1:11:18.79:91,19,0	0/0:10,0:9:7.24:0,7,61	0/0:9,0:9:12.35:0,12,116	0/0:3,0:3:2.16:0,2,28	0/1:3,1:4:7.98:29,0,8	1/1:7,0:7:1.93:9,2,0	0/1:5,0:5:6.62:7,0,9	0/1:9,0:9:7.77:8,0,10	0/0:8,0:8:8.64:0,9,83	0/0:7,0:7:16.05:0,16,70	0/1:17,0:16:2.76:3,0,75
chr10	56973220	.	G	GT	5783.31	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-7.616;DP=681;FS=3.384;HRun=7;HaplotypeScore=83.6414;InbreedingCoeff=0.9979;MQ=56.62;MQ0=2;MQRankSum=2.342;QD=29.81;ReadPosRankSum=3.940;VQSLOD=5.2387;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:53.58:0,54,500	0/0:12,0:12:36.03:0,36,339	0/0:22,0:13:26.98:0,27,247	0/0:11,0:7:17.39:0,17,150	0/0:22,0:22:54.08:0,54,521	1/1:2,30:32:81.25:978,81,0	1/1:0,11:11:27.08:326,27,0	0/0:31,0:31:78.12:0,78,753	0/0:29,0:29:81.13:0,81,782	0/0:37,0:37:96.11:0,96,912	0/0:19,0:19:54.09:0,54,521	1/1:0,21:21:54.17:652,54,0	0/0:20,0:20:57.09:0,57,550	0/0:28,0:28:72.08:0,72,679	0/0:28,0:28:72.12:0,72,695	1/1:1,25:26:63.19:761,63,0	1/1:1,16:16:45.07:509,45,0	1/1:2,12:15:24.64:385,25,0	0/0:23,0:19:51.08:0,51,492	0/0:31,0:31:87.14:0,87,840	0/0:27,0:27:78.12:0,78,753	1/1:3,23:26:57.17:688,57,0	1/1:3,22:25:66.20:795,66,0	1/1:1,20:21:57.17:689,57,0	0/0:30,0:30:81.10:0,81,776	0/0:38,0:38:99:0,108,1038	0/0:33,0:32:90.14:0,90,869	0/0:24,0:24:72.12:0,72,695
chr10	56973784	.	AT	A	2983.64	PASS	AB=0.914;AC=20;AF=0.357;AN=56;BaseQRankSum=10.213;DP=561;FS=1.251;HRun=9;HaplotypeScore=54.0479;InbreedingCoeff=0.8480;MQ=57.03;MQ0=3;MQRankSum=2.361;QD=18.08;ReadPosRankSum=0.528;VQSLOD=3.6965;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:81.23:0,81,921	0/0:0,0:9:25.57:0,26,130	0/1:12,1:7:15.45:15,0,73	0/1:8,1:5:15.25:15,0,92	0/0:46,0:45:99:0,111,1264	1/1:1,14:15:36.02:330,36,0	1/1:2,12:14:39:352,39,0	0/0:6,0:25:60:0,60,323	0/0:13,0:13:39.11:0,39,442	0/0:27,0:27:75.22:0,75,866	0/0:24,0:24:57.12:0,57,634	1/1:1,15:16:42.02:384,42,0	0/0:11,0:11:33.09:0,33,371	0/0:11,0:11:30.08:0,30,336	0/0:22,0:22:60.18:0,60,692	1/1:3,11:15:27.01:247,27,0	1/1:3,10:14:34.64:291,35,0	1/1:0,19:19:45.02:412,45,0	0/0:22,0:20:54.11:0,54,589	0/0:37,0:38:99:0,108,1246	0/0:15,0:15:45.11:0,45,507	1/1:2,13:15:36.02:329,36,0	1/1:1,21:22:59.95:549,60,0	1/1:1,12:13:30.02:275,30,0	0/0:14,0:14:36.11:0,36,416	0/0:27,0:27:78.22:0,78,885	0/0:39,0:39:96.24:0,96,1077	0/0:16,0:16:39.10:0,39,440
chr10	56974507	.	T	TGTTTCTGTTTA	20164.06	PASS	AC=42;AF=0.840;AN=50;BaseQRankSum=-3.518;DP=608;FS=0.477;HRun=0;HaplotypeScore=106.5351;InbreedingCoeff=0.7977;MQ=38.93;MQ0=19;MQRankSum=-11.886;QD=48.12;ReadPosRankSum=-0.168;VQSLOD=4.2984;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:35:81.25:0,81,2567	1/1:7,6:15:9.03:455,9,0	./.	./.	0/0:39,0:38:99:0,108,3549	1/1:7,10:16:12.04:357,12,0	1/1:7,6:13:15.05:714,15,0	1/1:20,0:9:6.02:150,6,0	1/1:12,5:16:18.06:554,18,0	1/1:20,13:32:56.75:2426,57,0	1/1:11,20:31:30.10:1411,30,0	1/1:4,9:12:6.02:295,6,0	0/0:30,0:29:66.23:0,66,2217	0/0:26,0:26:39.13:0,39,1198	1/1:9,13:20:15.05:797,15,0	1/1:7,10:14:21.07:1020,21,0	1/1:7,6:11:9.03:460,9,0	1/1:3,3:6:6.02:334,6,0	1/1:14,6:7:12.04:667,12,0	1/1:10,20:33:24.08:1145,24,0	1/1:3,2:6:3.01:86,3,0	1/1:6,17:24:33.11:1574,33,0	1/1:7,21:28:42.14:2018,42,0	./.	1/1:8,15:24:30.10:1425,30,0	1/1:8,17:25:67.44:2822,67,0	1/1:13,11:23:30.10:1120,30,0	1/1:2,2:6:6.02:334,6,0
chr10	56977641	.	T	TA	17507.79	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-10.479;DP=571;FS=1.595;HRun=2;HaplotypeScore=63.0118;InbreedingCoeff=0.9987;MQ=90.98;MQ0=0;MQRankSum=-6.186;QD=41.10;ReadPosRankSum=0.959;VQSLOD=5.0635;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:75.21:0,75,955	1/1:0,8:8:21.07:315,21,0	0/0:23,0:23:66.18:0,66,823	0/0:22,0:23:55.40:0,55,668	0/0:40,0:40:99:0,120,1541	1/1:2,20:22:63.20:913,63,0	1/1:0,18:18:51.17:754,51,0	1/1:1,32:33:90.28:1300,90,0	1/1:1,15:16:42.14:630,42,0	1/1:1,27:27:81.25:1174,81,0	1/1:0,21:21:60.16:872,60,0	1/1:2,16:18:54.10:751,54,0	0/0:15,0:15:45.13:0,45,568	0/0:18,0:18:54.18:0,54,701	1/1:0,25:25:69.14:1034,69,0	1/1:1,8:9:24.08:353,24,0	1/1:1,13:14:35.78:537,36,0	1/1:0,12:12:36.12:539,36,0	1/1:0,20:20:60.20:898,60,0	1/1:2,26:28:75.09:1024,75,0	1/1:0,15:15:45.15:675,45,0	1/1:3,17:20:57.18:810,57,0	1/1:1,20:21:57.19:827,57,0	1/1:1,16:17:51.17:762,51,0	1/1:1,19:20:51.17:765,51,0	1/1:1,26:27:81.26:1184,81,0	1/1:1,21:22:57.19:854,57,0	1/1:0,12:12:36.12:539,36,0
chr10	56977694	.	TTTTG	T	7007.70	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=10.727;DP=647;FS=0.740;HRun=0;HaplotypeScore=142.7815;InbreedingCoeff=0.9965;MQ=70.11;MQ0=0;MQRankSum=-9.928;QD=38.29;ReadPosRankSum=2.779;VQSLOD=5.1114;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:87.27:0,87,2012	0/0:13,0:13:39.13:0,39,968	0/0:27,0:25:51.17:0,51,1149	0/0:34,0:30:37.32:0,37,1006	0/0:28,0:28:78.27:0,78,1861	1/1:2,22:24:66.22:1094,66,0	1/1:8,13:21:45.15:743,45,0	0/0:37,0:37:72.21:0,72,1551	0/0:17,0:17:42.14:0,42,1059	0/0:29,0:29:75.26:0,75,1880	0/0:20,0:20:54.18:0,54,1310	1/1:2,11:13:27.09:469,27,0	0/0:16,0:16:39.12:0,39,866	0/0:22,0:22:63.21:0,63,1472	0/0:32,0:32:93.28:0,93,2131	1/1:3,16:19:48.14:783,48,0	1/1:2,27:29:63.22:1095,63,0	1/1:3,12:15:30.10:522,30,0	0/0:29,0:29:69.23:0,69,1586	0/0:24,0:24:63.21:0,63,1445	0/0:17,0:17:39.11:0,39,835	1/1:1,17:18:45.15:736,45,0	1/1:7,16:23:54.17:892,54,0	1/1:3,18:21:38.91:674,39,0	0/0:17,0:16:48.16:0,48,1095	0/0:28,0:28:72.24:0,72,1714	0/0:23,1:24:13.94:0,14,1391	0/0:18,0:18:48.16:0,48,1185
chr10	56979236	.	TAGTA	T	11145.90	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=18.329;DP=636;FS=0.646;HRun=0;HaplotypeScore=144.1413;InbreedingCoeff=0.9989;MQ=83.26;MQ0=0;MQRankSum=-19.143;QD=53.33;ReadPosRankSum=-2.144;VQSLOD=5.1949;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,135,3855	0/0:7,0:7:21.07:0,21,604	0/0:28,0:28:84.29:0,84,2332	0/0:35,0:35:99:0,103,2564	0/0:14,0:14:42.13:0,42,1154	0/0:18,0:18:54.19:0,54,1527	0/0:26,0:27:78.26:0,78,2202	0/0:33,0:33:99:0,99,2806	1/1:4,27:31:90.31:1733,90,0	1/1:0,19:20:57.19:1116,57,0	1/1:0,10:10:27.09:496,27,0	0/0:22,0:22:66.23:0,66,1912	0/0:42,0:42:99:0,126,3543	0/0:23,0:23:69.24:0,69,1999	1/1:1,18:19:57.18:1056,57,0	0/0:22,0:22:34.67:0,35,1753	0/0:33,0:33:99:0,99,2866	0/0:26,0:26:78.27:0,78,2260	1/1:4,17:21:60.19:1110,60,0	1/1:1,11:12:33.10:592,33,0	1/1:5,18:23:54.18:1002,54,0	0/0:11,0:11:33.11:0,33,955	0/0:18,0:18:54.19:0,54,1554	0/0:23,0:23:69.24:0,69,1952	1/1:0,18:18:54.19:1047,54,0	1/1:0,25:26:78.27:1509,78,0	1/1:1,16:17:51.18:1005,51,0	1/1:4,8:12:24.08:478,24,0
chr10	56979240	.	AG	A	1159.86	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=19.796;DP=644;FS=0.659;HRun=1;HaplotypeScore=142.5839;InbreedingCoeff=0.9965;MQ=85.49;MQ0=0;MQRankSum=-19.222;QD=5.60;ReadPosRankSum=-0.934;VQSLOD=0.0329;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,141,2220	0/0:7,0:7:21.07:0,21,330	0/0:29,0:29:87.29:0,87,1347	0/0:32,0:32:91.34:0,91,1427	0/0:15,0:15:45.13:0,45,687	0/0:19,0:19:57.16:0,57,861	0/0:28,0:28:81.28:0,81,1287	0/0:34,0:34:99:0,102,1585	1/1:29,0:29:61.96:250,62,0	1/1:22,0:22:35.88:109,36,0	1/1:11,0:11:20.20:69,20,0	0/0:25,0:25:75.24:0,75,1170	0/0:40,0:40:99:0,120,1913	0/0:23,0:23:69.24:0,69,1099	1/1:18,0:18:39.94:126,40,0	0/0:22,0:22:44.29:0,44,962	0/0:35,0:35:99:0,105,1649	0/0:26,0:26:78.27:0,78,1247	1/1:17,0:17:26.52:99,27,0	1/1:12,0:12:22.47:70,22,0	1/1:24,0:24:36.03:115,36,0	0/0:12,0:12:36.12:0,36,568	0/0:18,0:18:54.18:0,54,863	0/0:25,0:25:75.21:0,75,1158	1/1:18,0:18:40.98:138,41,0	1/1:26,0:26:53.80:216,54,0	1/1:17,1:18:35.87:134,36,0	1/1:8,4:12:16.78:60,17,0
chr10	56979242	.	CT	C	6630.10	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=19.538;DP=660;FS=0.996;HRun=2;HaplotypeScore=125.3494;InbreedingCoeff=0.9984;MQ=85.03;MQ0=0;MQRankSum=-19.241;QD=31.42;ReadPosRankSum=-0.947;VQSLOD=4.2702;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,144,2155	0/0:7,0:7:18.06:0,18,270	0/0:29,0:29:84.27:0,84,1236	0/0:32,0:32:90.09:0,90,1310	0/0:15,0:15:45.15:0,45,674	0/0:19,0:19:54.17:0,54,789	0/0:26,0:26:78.22:0,78,1144	0/0:35,0:35:99:0,105,1556	1/1:2,28:30:90.26:1035,90,0	1/1:1,21:22:63.05:733,63,0	1/1:1,11:12:33.03:331,33,0	0/0:26,0:26:78.26:0,78,1168	0/0:42,0:42:99:0,120,1757	0/0:24,0:24:69.23:0,69,1016	1/1:0,18:18:54.15:605,54,0	0/0:25,0:25:75.19:0,75,1041	0/0:36,0:36:99:0,108,1598	0/0:26,0:26:78.24:0,78,1147	1/1:1,16:17:51.05:596,51,0	1/1:0,13:13:30.07:329,30,0	1/1:0,26:26:51.14:578,51,0	0/0:15,0:15:39.11:0,39,561	0/0:18,0:18:54.18:0,54,809	0/0:25,0:25:75.25:0,75,1124	1/1:2,17:19:57.06:618,57,0	1/1:0,26:26:78.13:889,78,0	1/1:2,17:19:54.16:630,54,0	1/1:1,8:9:24.07:286,24,0
chr10	56980268	.	TC	T	3973.12	PASS	AB=0.938;AC=27;AF=0.482;AN=56;BaseQRankSum=3.296;DP=467;FS=0.411;HRun=10;HaplotypeScore=55.3831;InbreedingCoeff=0.6530;MQ=70.92;MQ0=0;MQRankSum=-1.955;QD=13.89;ReadPosRankSum=5.111;VQSLOD=3.5335;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,1:30:55.05:0,55,570	1/1:3,7:10:17.98:156,18,0	0/1:13,0:12:1.19:1,0,135	0/0:16,0:14:15.43:0,15,130	0/1:8,0:8:10.98:11,0,118	1/1:7,18:25:25.42:368,25,0	1/1:5,14:19:32.98:286,33,0	1/1:12,12:24:32.97:284,33,0	0/0:20,0:20:42.09:0,42,448	0/0:11,0:11:21.06:0,21,232	0/0:4,0:4:3:0,3,26	1/1:7,17:24:56.93:483,57,0	0/0:18,0:17:33.03:0,33,329	0/0:13,1:14:9.93:0,10,309	0/0:10,0:10:21.06:0,21,232	1/1:3,21:24:26.84:461,27,0	1/1:3,25:28:68.97:599,69,0	1/1:1,12:13:29.99:260,30,0	0/0:16,0:16:23.93:0,24,228	0/1:11,1:12:1.98:2,0,200	0/1:18,2:20:12.99:13,0,301	1/1:6,12:18:5.82:278,6,0	1/1:2,7:10:20.02:162,20,0	1/1:2,23:26:68.02:579,68,0	0/1:10,2:12:27.98:28,0,167	0/0:15,0:15:21.04:0,21,217	0/0:14,2:16:13.01:0,13,356	0/0:11,0:11:18.02:0,18,180
chr10	56980693	.	A	AAAGG	4954.52	PASS	AB=0.981;AC=22;AF=0.393;AN=56;BaseQRankSum=3.490;DP=546;FS=10.232;HRun=0;HaplotypeScore=139.5878;InbreedingCoeff=-0.0407;MQ=56.84;MQ0=3;MQRankSum=-9.477;QD=14.44;ReadPosRankSum=4.138;VQSLOD=4.0569;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:81.25:0,81,1464	1/1:7,3:9:24.07:418,24,0	0/0:17,0:13:31.19:0,31,418	0/0:12,0:12:24.02:0,24,367	0/0:15,0:15:45.13:0,45,768	0/1:21,0:21:30.98:31,0,181	0/1:17,0:17:66.04:66,0,320	0/1:22,13:35:99:811,0,109	0/1:17,0:17:18.43:352,0,18	0/1:25,0:25:21.20:484,0,21	0/1:11,0:11:14.33:75,0,14	0/1:18,0:18:13.28:13,0,206	0/0:20,0:20:54.14:0,54,874	0/0:18,0:18:51.12:0,51,788	0/1:14,0:14:0.92:275,0,1	0/0:26,0:26:8.72:0,9,338	0/0:29,0:29:10.63:0,11,134	0/0:21,0:21:31.62:0,32,305	0/1:20,0:19:99:235,0,117	0/1:22,0:22:34.71:441,0,35	0/1:12,0:12:25.42:71,0,25	0/0:18,0:18:18.91:0,19,425	0/1:22,0:22:46.88:75,0,47	0/1:26,0:26:10.08:10,0,75	1/1:29,0:28:4.54:607,5,0	1/1:25,0:24:48.34:669,48,0	0/1:14,0:14:31.53:195,0,32	1/1:5,0:5:9.03:127,9,0
chr10	56980699	.	A	AGAAAAAAG	18680.19	PASS	AB=0.569;AC=38;AF=0.679;AN=56;BaseQRankSum=1.680;DP=579;FS=22.095;HRun=0;HaplotypeScore=137.8385;InbreedingCoeff=0.4711;MQ=59.00;MQ0=3;MQRankSum=-5.028;QD=39.66;ReadPosRankSum=3.685;VQSLOD=3.1036;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:90.26:0,90,2258	1/1:5,0:7:21.04:525,21,0	0/0:16,0:12:23.83:0,24,373	0/0:10,0:10:26.49:0,26,421	0/0:17,0:17:51.16:0,51,1221	0/1:3,0:20:95.18:198,0,95	0/1:7,0:22:99:237,0,240	1/1:40,0:40:99:1628,108,0	1/1:0,14:18:27.09:1223,27,0	1/1:1,20:26:75.21:2142,75,0	1/1:0,7:10:15.05:402,15,0	0/1:3,0:17:99:213,0,103	0/0:17,0:17:51.17:0,51,1367	0/0:16,0:16:44.73:0,45,942	1/1:1,13:16:21.07:951,21,0	0/1:5,0:27:99:318,0,166	1/1:2,0:29:15.43:408,15,0	0/1:5,0:20:99:234,0,146	1/1:1,13:20:59.06:1384,59,0	1/1:0,21:27:66.15:1856,66,0	1/1:11,0:11:26.98:449,27,0	0/1:8,0:23:99:266,0,250	1/1:1,0:24:24.48:337,24,0	1/1:1,0:26:3.06:336,3,0	1/1:1,29:30:48.16:2007,48,0	1/1:2,24:30:84.26:2480,84,0	1/1:0,13:16:14.86:679,15,0	1/1:2,5:8:9.03:408,9,0
chr10	56980885	.	TTTG	T	7869.09	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=11.986;DP=525;FS=0.000;HRun=0;HaplotypeScore=115.4896;InbreedingCoeff=0.9898;MQ=77.54;MQ0=0;MQRankSum=-6.185;QD=45.49;ReadPosRankSum=2.822;VQSLOD=6.3938;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:90.31:0,90,2044	0/0:4,0:4:9.03:0,9,207	0/0:22,0:23:51.05:0,51,1336	0/0:22,0:21:54.61:0,55,1087	0/0:16,0:16:45.15:0,45,1038	0/0:16,0:16:42.13:0,42,922	0/0:28,0:28:84.29:0,84,1903	0/0:29,0:29:87.30:0,87,1966	1/1:0,11:11:33.11:562,33,0	1/1:1,20:21:60.21:1022,60,0	1/1:0,14:14:39.13:665,39,0	0/0:21,0:21:57.20:0,57,1272	0/0:20,0:20:60.21:0,60,1353	0/0:21,0:21:63.22:0,63,1434	1/1:0,15:15:39.01:665,39,0	0/0:22,1:23:18.06:0,18,1459	0/0:26,0:26:72.72:0,73,1633	0/0:14,0:14:39.13:0,39,875	1/1:0,16:16:48.14:788,48,0	1/1:0,15:15:39.13:665,39,0	1/1:1,24:25:60.21:1023,60,0	0/0:17,0:17:48.16:0,48,1101	0/0:15,0:15:42.14:0,42,914	0/0:25,0:25:63.22:0,63,1445	1/1:0,12:12:33.11:563,33,0	1/1:1,14:15:39.12:638,39,0	1/1:1,21:22:54.18:921,54,0	1/1:0,7:7:21.07:358,21,0
chr10	56980945	.	GA	G	2697.46	PASS	AB=0.797;AC=23;AF=0.411;AN=56;BaseQRankSum=1.955;DP=537;FS=2.775;HRun=12;HaplotypeScore=95.0567;InbreedingCoeff=0.6509;MQ=69.05;MQ0=0;MQRankSum=0.829;QD=10.41;ReadPosRankSum=5.850;VQSLOD=3.2871;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:30:74.88:0,75,685	1/1:2,12:14:23.38:185,23,0	0/1:16,0:16:0.69:1,0,135	0/1:9,1:10:8.17:8,0,128	0/0:26,2:29:23.90:0,24,539	1/1:7,11:19:1.35:143,1,0	1/1:5,15:20:41.80:325,42,0	1/1:5,15:20:44.77:348,45,0	0/0:12,0:12:33.03:0,33,324	0/0:20,0:20:38.98:0,39,361	0/0:23,0:24:45.26:0,45,402	1/1:4,17:22:46.83:354,47,0	0/0:25,0:27:65.91:0,66,631	0/0:20,1:21:22.68:0,23,383	0/0:10,0:10:26.97:0,27,247	0/1:7,12:21:15:244,0,15	1/1:8,14:22:41.80:325,42,0	1/1:1,9:10:26.89:209,27,0	0/1:18,2:21:4.61:5,0,291	0/0:17,0:18:43.71:0,44,389	0/0:12,0:12:18.04:0,18,183	1/1:7,12:19:14.65:234,15,0	1/1:8,12:22:34.99:262,35,0	0/1:5,17:23:35.59:258,0,36	0/0:20,1:22:15.57:0,16,283	0/0:12,0:12:20.86:0,21,177	0/0:29,1:30:39.83:0,40,563	0/0:11,0:11:26.97:0,27,248
chr10	56981022	.	AAATC	A	8275.21	PASS	AB=0.957;AC=45;AF=0.804;AN=56;BaseQRankSum=10.068;DP=547;FS=16.638;HRun=0;HaplotypeScore=111.7489;InbreedingCoeff=0.8071;MQ=61.55;MQ0=3;MQRankSum=-2.160;QD=18.85;ReadPosRankSum=3.165;VQSLOD=3.4858;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:45.14:0,45,999	1/1:3,0:6:9.01:84,9,0	0/0:28,0:24:6.02:0,6,143	0/0:18,0:15:21.07:0,21,461	0/1:21,1:22:2.09:2,0,941	1/1:6,0:19:36.04:335,36,0	1/1:16,0:26:21.02:195,21,0	1/1:31,0:37:6:53,6,0	1/1:9,12:21:27.09:425,27,0	1/1:6,18:24:57.03:814,57,0	1/1:10,11:21:39.13:614,39,0	1/1:8,0:18:33.03:312,33,0	0/0:21,0:21:42.14:0,42,965	0/0:16,0:16:39.13:0,39,921	1/1:2,12:14:24.08:378,24,0	1/1:8,0:16:27.04:260,27,0	1/1:10,0:14:10.26:87,10,0	1/1:1,0:3:3:28,3,0	1/1:18,7:24:21.07:331,21,0	1/1:9,20:29:57.19:898,57,0	1/1:7,14:21:33.11:520,33,0	1/1:2,0:10:24.03:223,24,0	1/1:3,0:12:27.03:251,27,0	1/1:15,0:19:5.51:55,6,0	1/1:10,9:19:36.12:566,36,0	1/1:5,12:17:36.11:544,36,0	1/1:13,17:30:69.22:1064,69,0	1/1:7,9:15:15.05:236,15,0
chr10	56981296	.	C	CCATGGTATA	45804.67	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-11.372;DP=713;FS=1.526;HRun=0;HaplotypeScore=149.1602;InbreedingCoeff=0.9584;MQ=77.29;MQ0=0;MQRankSum=-15.909;QD=85.30;ReadPosRankSum=0.094;VQSLOD=5.0447;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,123,3375	1/1:2,9:12:18.06:755,18,0	0/0:23,0:23:60.10:0,60,1522	0/0:25,0:25:62.61:0,63,1699	0/0:41,0:41:99:0,114,3280	1/1:5,16:26:54.19:2425,54,0	1/1:3,22:26:48.16:2141,48,0	1/1:17,17:41:99:3616,102,0	1/1:8,21:30:63.22:2792,63,0	1/1:5,25:34:99:4212,99,0	1/1:5,20:27:48.16:2194,48,0	1/1:3,18:22:48.16:2191,48,0	0/0:22,0:22:60.21:0,60,1693	0/0:21,0:21:57.18:0,57,1589	1/1:5,14:22:45.15:1981,45,0	1/1:1,19:22:48.16:2311,48,0	1/1:2,11:15:18.06:866,18,0	1/1:7,13:21:36.12:1663,36,0	1/1:12,11:26:69.17:2459,69,0	1/1:9,21:32:51.13:1991,51,0	1/1:3,13:17:12:453,12,0	1/1:6,20:29:51.18:2316,51,0	1/1:3,25:29:48.16:1998,48,0	1/1:6,6:16:9.03:410,9,0	1/1:5,13:18:33.11:1465,33,0	1/1:7,21:33:84.22:3413,84,0	1/1:9,26:37:84.29:3864,84,0	1/1:0,2:2:6.02:289,6,0
chr10	56984584	.	ACT	A	915.18	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=8.067;DP=440;FS=0.754;HRun=0;HaplotypeScore=53.3220;InbreedingCoeff=0.6698;MQ=69.36;MQ0=0;MQRankSum=-4.025;QD=27.73;ReadPosRankSum=-2.462;VQSLOD=3.8902;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:72.25:0,72,1328	1/1:0,3:3:3.01:43,3,0	0/0:7,0:7:21.03:0,21,306	0/1:5,0:5:12.06:12,0,149	0/0:22,0:22:66.21:0,66,1185	0/0:22,0:22:66.21:0,66,1181	0/0:20,0:20:60.21:0,60,1097	1/1:1,24:25:72.20:976,72,0	0/0:8,0:8:24.08:0,24,423	0/0:16,0:16:42.14:0,42,772	0/0:21,0:21:60.21:0,60,1112	0/0:8,0:8:24.08:0,24,449	0/0:5,0:5:15.05:0,15,281	0/0:16,0:16:45.15:0,45,832	0/0:19,0:19:57.20:0,57,1033	0/0:11,0:11:30.10:0,30,562	0/0:28,0:27:84.27:0,84,1504	0/0:34,0:34:99:0,99,1838	0/0:17,0:17:51.17:0,51,940	0/0:16,0:16:48.16:0,48,892	0/0:8,0:8:21.07:0,21,393	0/0:11,0:11:33.11:0,33,613	0/0:19,0:19:51.17:0,51,937	0/0:11,0:11:30.10:0,30,562	0/0:19,0:19:57.20:0,57,1068	0/0:26,0:26:78.27:0,78,1458	0/0:16,0:16:48.16:0,48,898	0/0:3,0:3:9.03:0,9,158
chr10	56984878	.	TACAC	T	5368.06	PASS	AB=0.891;AC=42;AF=0.750;AN=56;BaseQRankSum=9.870;DP=578;FS=3.600;HRun=0;HaplotypeScore=135.5559;InbreedingCoeff=0.5757;MQ=61.15;MQ0=13;MQRankSum=-3.067;QD=11.96;ReadPosRankSum=-1.151;VQSLOD=4.0398;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:41,0:41:37.60:38,0,1269	1/1:0,0:3:3:28,3,0	0/0:25,0:14:2.98:0,3,21	0/0:32,0:19:5.99:0,6,48	0/0:23,0:23:45.15:0,45,1025	1/1:5,0:23:5.40:127,5,0	1/1:10,0:20:15.01:138,15,0	0/0:25,0:23:8.97:0,9,82	1/1:4,8:12:18.06:288,18,0	1/1:6,16:22:51.17:764,51,0	1/1:12,12:23:15.05:240,15,0	1/1:4,0:26:32.58:302,33,0	0/0:10,0:10:18.06:0,18,426	0/0:14,0:14:20.06:0,20,637	1/1:6,18:25:32.57:507,33,0	1/1:5,0:19:0.22:169,0,0	1/1:13,0:26:15.02:140,15,0	1/1:7,0:17:3:28,3,0	0/1:13,4:16:4.37:121,0,4	1/1:4,10:14:5.99:96,6,0	1/1:17,14:31:12.45:193,12,0	1/1:2,0:15:5.84:55,6,0	1/1:4,0:20:5.74:56,6,0	1/1:2,0:11:9.01:83,9,0	1/1:3,24:28:51.17:813,51,0	1/1:9,12:21:36.92:463,37,0	1/1:9,17:26:33.11:528,33,0	1/1:0,4:4:12.04:192,12,0
chr10	56986953	.	AG	A	1382.64	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.305;DP=723;FS=1.275;HRun=2;HaplotypeScore=68.7624;InbreedingCoeff=0.9989;MQ=75.82;MQ0=0;MQRankSum=-2.279;QD=33.72;ReadPosRankSum=-3.440;VQSLOD=2.5176;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,102,1529	1/1:0,9:9:24.08:312,24,0	0/0:22,0:22:63.21:0,63,914	0/0:25,0:25:51.06:0,51,926	0/0:24,0:24:72.24:0,72,1076	0/0:28,0:28:84.28:0,84,1259	0/0:21,0:21:63.20:0,63,924	1/1:0,32:32:93.29:1192,93,0	0/0:33,0:33:96.31:0,96,1417	0/0:29,0:29:87.29:0,87,1292	0/0:30,0:30:87.29:0,87,1291	0/0:24,0:24:72.22:0,72,1054	0/0:20,0:20:60.19:0,60,878	0/0:23,0:23:69.23:0,69,1034	0/0:32,0:32:96.31:0,96,1418	0/0:23,0:23:69.23:0,69,1032	0/0:27,0:27:78.25:0,78,1150	0/0:12,0:12:36.12:0,36,540	0/0:21,0:21:63.21:0,63,944	0/0:38,0:38:99:0,114,1706	0/0:47,0:47:99:0,141,2067	0/0:27,0:27:72.22:0,72,1038	0/0:16,0:16:48.16:0,48,719	0/0:38,0:38:99:0,111,1664	0/0:23,0:23:66.21:0,66,969	0/0:17,0:17:51.17:0,51,764	0/0:33,0:33:93.30:0,93,1375	0/0:15,0:15:45.15:0,45,672
chr10	56988059	.	TAAAAA	T	880.93	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.078;DP=443;FS=6.053;HRun=10;HaplotypeScore=82.0217;InbreedingCoeff=0.9869;MQ=72.31;MQ0=0;MQRankSum=-4.266;QD=41.95;ReadPosRankSum=-1.671;VQSLOD=2.0878;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:57.20:0,57,1737	1/1:0,7:7:18.06:337,18,0	0/0:17,0:14:41.75:0,42,830	0/0:17,0:14:23.51:0,24,559	0/0:24,0:24:69.24:0,69,2022	0/0:11,0:11:30.10:0,30,847	0/0:15,0:15:33.10:0,33,804	1/1:1,13:14:39.12:664,39,0	0/0:9,0:9:21.07:0,21,548	0/0:28,0:28:75.24:0,75,2024	0/0:12,0:12:33.11:0,33,1006	0/0:14,0:14:42.14:0,42,1267	0/0:8,0:8:24.07:0,24,615	0/0:9,0:9:27.09:0,27,823	0/0:6,0:7:21.07:0,21,572	0/0:16,0:17:45.15:0,45,1284	0/0:20,0:21:60.20:0,60,1754	0/0:14,0:14:36.12:0,36,1050	0/0:22,0:24:66.20:0,66,1803	0/0:25,0:26:66.21:0,66,1857	0/0:13,0:13:33.11:0,33,954	0/0:16,0:17:48.16:0,48,1407	0/0:25,0:25:69.23:0,69,2000	0/0:14,0:14:39.12:0,39,1123	0/0:13,0:13:33.11:0,33,995	0/0:20,0:20:57.20:0,57,1719	0/0:15,0:16:36.12:0,36,1058	0/0:8,0:8:24.08:0,24,716
chr10	56988427	.	GTA	G	1795.97	PASS	AB=0.934;AC=23;AF=0.442;AN=52;BaseQRankSum=6.686;DP=239;FS=1.225;HRun=0;HaplotypeScore=39.5614;InbreedingCoeff=0.6297;MQ=77.87;MQ0=1;MQRankSum=-2.064;QD=14.72;ReadPosRankSum=0.083;VQSLOD=3.2749;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:57.19:0,57,921	1/1:0,0:3:4.56:26,5,0	0/1:7,0:6:16.67:18,0,17	0/0:6,0:6:1.82:0,2,5	0/0:5,0:5:9.03:0,9,148	1/1:2,9:11:27.08:335,27,0	1/1:4,2:6:9.03:111,9,0	1/1:9,0:27:47.90:228,48,0	0/0:3,0:3:6.02:0,6,98	0/1:5,1:6:22.10:22,0,182	0/0:3,0:3:9.03:0,9,135	1/1:0,6:6:18.06:223,18,0	0/0:4,0:4:6.02:0,6,98	0/0:6,0:6:12.04:0,12,197	0/0:5,0:5:12.04:0,12,197	1/1:1,7:7:15.05:186,15,0	1/1:2,9:11:27.08:335,27,0	1/1:4,11:16:35.94:423,36,0	0/0:9,0:9:21.07:0,21,335	0/0:8,0:8:12.04:0,12,197	./.	./.	1/1:1,1:2:3.01:37,3,0	1/1:1,1:2:3.01:37,3,0	0/0:11,0:10:30.10:0,30,491	0/1:16,1:17:1.05:1,0,495	0/0:17,0:17:42.13:0,42,663	0/0:12,0:12:33.11:0,33,534
chr10	56988480	.	TA	T	3141.15	PASS	AB=0.781;AC=45;AF=0.804;AN=56;BaseQRankSum=1.966;DP=311;FS=1.275;HRun=13;HaplotypeScore=43.3525;InbreedingCoeff=0.5311;MQ=89.53;MQ0=0;MQRankSum=-2.304;QD=12.72;ReadPosRankSum=3.716;VQSLOD=3.4957;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,1:30:48.04:0,48,599	1/1:0,2:3:5.02:28,5,0	0/0:20,0:13:23.96:0,24,212	0/1:19,1:20:4.63:5,0,97	0/0:7,0:7:15.02:0,15,146	1/1:3,12:16:6.62:211,7,0	1/1:2,4:8:16:99,16,0	1/1:3,23:26:68.07:487,68,0	1/1:1,6:7:17.87:131,18,0	1/1:3,9:12:26.82:195,27,0	1/1:0,3:3:8.95:66,9,0	1/1:3,7:10:0.64:165,1,0	0/0:6,0:7:20.81:0,21,178	0/1:4,1:5:9.89:10,0,76	1/1:2,7:9:20.86:153,21,0	1/1:3,1:4:8.90:61,9,0	1/1:3,17:21:20.59:305,21,0	1/1:2,11:14:31.86:225,32,0	1/1:1,8:9:1.35:148,1,0	1/1:2,7:10:16.90:115,17,0	0/1:1,4:5:15.90:16,0,23	1/1:1,2:3:2.97:22,3,0	1/1:0,5:5:8.94:66,9,0	1/1:0,8:9:22.92:159,23,0	1/1:3,10:14:28.84:203,29,0	1/1:5,8:14:25.86:179,26,0	1/1:4,6:10:11.91:88,12,0	1/1:1,8:9:23.86:175,24,0
chr10	56989534	.	A	AGTGTGTGTGT	13342.86	PASS	AB=0.767;AC=41;AF=0.759;AN=54;BaseQRankSum=0.595;DP=659;FS=0.000;HRun=0;HaplotypeScore=219.4466;InbreedingCoeff=0.8285;MQ=60.57;MQ0=10;MQRankSum=-9.496;QD=28.88;ReadPosRankSum=-4.393;VQSLOD=3.4622;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:39:69.21:0,69,1731	1/1:7,0:6:3.01:120,3,0	0/0:34,0:21:3.01:0,3,86	0/0:28,0:16:5.93:0,6,107	0/0:36,0:42:56.97:0,57,1561	1/1:18,6:29:24.08:896,24,0	1/1:23,3:31:26.56:937,27,0	1/1:30,0:27:30.96:796,31,0	1/1:12,3:16:10.39:434,10,0	1/1:15,0:23:38.38:1187,38,0	./.	1/1:9,8:20:27.09:1282,27,0	0/0:15,0:19:42.14:0,42,1115	0/0:20,0:24:57.20:0,57,1621	1/1:10,3:16:12.93:503,13,0	1/1:8,4:13:15.52:691,16,0	1/1:16,4:22:14.92:475,15,0	1/1:10,4:17:14.72:509,15,0	1/1:14,0:13:15.57:216,16,0	1/1:24,0:34:9.50:331,10,0	0/1:16,0:23:0.16:0,0,0	1/1:15,9:27:24.55:1169,25,0	1/1:14,6:22:15.52:615,16,0	1/1:26,3:34:12.51:481,13,0	1/1:18,1:22:18.06:682,18,0	1/1:18,1:22:19.86:576,20,0	1/1:18,1:22:22.84:878,23,0	1/1:9,0:10:15.05:564,15,0
chr10	56993175	.	C	CCCTT	1160.89	PASS	AB=1.000;AC=8;AF=0.143;AN=56;BaseQRankSum=3.258;DP=660;FS=21.190;HRun=0;HaplotypeScore=167.7241;InbreedingCoeff=0.4154;MQ=68.01;MQ0=2;MQRankSum=-5.571;QD=10.75;ReadPosRankSum=-1.970;VQSLOD=1.5399;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:93.29:0,93,1901	1/1:5,7:12:30.45:633,30,0	0/0:38,0:30:90.27:0,90,1655	0/0:22,0:21:36.41:0,36,854	0/0:20,0:20:51.17:0,51,1067	0/0:17,0:17:28.70:0,29,446	0/0:28,0:28:26.12:0,26,536	1/1:0,16:19:56.86:621,57,0	0/0:10,0:10:20.81:0,21,273	0/0:30,0:30:49.36:0,49,761	0/1:17,0:17:18.40:18,0,203	0/0:21,0:21:8.54:0,9,490	0/0:23,0:23:69.22:0,69,1387	0/0:16,0:16:48.16:0,48,1005	0/0:33,0:33:24.57:0,25,739	0/1:19,0:19:11.30:11,0,362	0/0:38,0:38:43.88:0,44,622	0/0:21,0:21:13.64:0,14,331	0/0:24,0:24:60.32:0,60,1051	0/0:22,0:22:19.28:0,19,385	0/0:23,0:23:29.53:0,30,386	0/0:30,0:29:40.71:0,41,372	0/0:20,0:20:19.10:0,19,274	0/0:19,0:19:13.09:0,13,319	0/0:30,0:30:53.07:0,53,680	0/0:36,0:36:98.81:0,99,902	0/1:32,0:31:13.30:13,0,524	0/1:9,0:9:9.02:9,0,58
chr10	56993178	.	T	TTTTG	21933.50	PASS	AB=0.647;AC=43;AF=0.768;AN=56;BaseQRankSum=-11.438;DP=688;FS=8.778;HRun=0;HaplotypeScore=99.4623;InbreedingCoeff=0.8833;MQ=64.66;MQ0=5;MQRankSum=-1.326;QD=40.47;ReadPosRankSum=0.453;VQSLOD=4.5657;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:87.30:0,87,1425	1/1:13,0:13:24.08:448,24,0	0/0:36,0:28:33.09:0,33,508	0/0:22,0:19:20.08:0,20,284	0/0:19,0:19:45.15:0,45,732	1/1:9,10:19:24.08:546,24,0	1/1:12,19:31:51.17:1226,51,0	1/1:21,0:21:23.96:382,24,0	0/1:5,6:11:28.08:417,0,28	1/1:11,19:30:54.18:1285,54,0	1/1:6,13:19:37.37:856,37,0	1/1:11,12:23:36.12:866,36,0	0/0:22,0:22:60.20:0,60,983	0/0:16,0:16:36.11:0,36,563	1/1:12,19:32:11.05:1322,11,0	1/1:6,13:21:33.11:801,33,0	1/1:10,27:38:32.13:1850,32,0	1/1:7,15:22:36.12:875,36,0	1/1:19,7:25:27.06:500,27,0	1/1:10,14:24:42.12:964,42,0	1/1:6,15:21:39.60:951,40,0	1/1:6,24:30:72.14:1695,72,0	1/1:9,15:24:39.13:949,39,0	1/1:7,12:19:36.12:876,36,0	1/1:14,21:35:11.05:1338,11,0	1/1:10,25:36:75.24:1760,75,0	1/1:12,22:33:60.10:1441,60,0	1/1:1,8:9:24.08:584,24,0
chr10	56993663	.	A	AT	1703.23	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-9.690;DP=736;FS=4.592;HRun=1;HaplotypeScore=88.3104;InbreedingCoeff=0.9897;MQ=65.48;MQ0=0;MQRankSum=0.644;QD=39.61;ReadPosRankSum=-5.090;VQSLOD=1.8897;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,123,1535	1/1:0,6:6:15.05:225,15,0	0/0:25,0:25:69.15:0,69,842	0/0:23,0:23:60.13:0,60,716	0/0:25,0:25:72.23:0,72,934	0/0:21,0:21:63.20:0,63,816	0/0:20,0:20:60.17:0,60,751	1/1:1,36:37:99:1597,108,0	0/0:22,0:22:60.19:0,60,778	0/0:33,0:33:96.31:0,96,1246	0/0:26,0:26:63.20:0,63,817	0/0:30,0:30:87.28:0,87,1127	0/0:33,0:33:96.30:0,96,1225	0/0:25,0:25:75.23:0,75,959	0/0:27,0:26:78.25:0,78,997	0/0:42,0:42:99:0,126,1575	0/0:23,0:23:63.20:0,63,818	0/0:26,0:26:75.20:0,75,941	0/0:20,0:20:45.99:0,46,653	0/0:34,0:34:99:0,99,1243	0/0:32,0:32:93.30:0,93,1205	0/0:29,0:29:84.26:0,84,1076	0/0:23,0:23:69.22:0,69,883	0/0:39,0:39:99:0,111,1425	0/0:14,0:14:42.14:0,42,545	0/0:22,0:22:60.19:0,60,779	0/0:31,0:31:93.27:0,93,1174	0/0:7,0:7:21.07:0,21,272
chr10	56993836	.	C	CTT	11172.16	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=2.577;DP=582;FS=7.173;HRun=11;HaplotypeScore=109.7337;InbreedingCoeff=0.9466;MQ=53.25;MQ0=5;MQRankSum=-7.376;QD=25.86;ReadPosRankSum=-3.295;VQSLOD=3.5207;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:39:90.46:0,90,803	1/1:1,10:11:29.59:400,30,0	0/0:19,0:8:5.82:0,6,83	0/0:26,0:13:20.39:0,20,168	0/0:21,0:25:20.57:0,21,436	1/1:9,8:21:49.48:542,49,0	1/1:5,8:17:35.08:416,35,0	1/1:14,14:25:47.62:626,48,0	1/1:3,3:6:14.98:171,15,0	1/1:12,6:20:29.04:314,29,0	1/1:6,8:18:41.58:490,42,0	1/1:11,13:24:48.13:646,48,0	0/0:22,0:22:45:0,45,425	0/0:17,0:17:42.51:0,43,403	1/1:14,8:21:15.40:433,15,0	1/1:8,9:19:32.85:535,33,0	1/1:8,10:20:44.08:553,44,0	1/1:10,5:15:21.03:269,21,0	1/1:17,12:29:59.58:735,60,0	1/1:14,12:27:59.63:785,60,0	1/1:6,6:12:27.42:296,27,0	1/1:12,9:22:32.60:442,33,0	1/1:10,14:24:33.61:715,34,0	1/1:9,10:20:42.11:558,42,0	1/1:6,12:20:54.12:703,54,0	1/1:8,11:20:21.52:608,22,0	1/1:7,15:24:68.60:846,69,0	1/1:1,1:2:6.02:87,6,0
chr10	56993868	.	CAG	C	14457.70	PASS	AC=40;AF=0.741;AN=54;BaseQRankSum=8.865;DP=479;FS=0.396;HRun=0;HaplotypeScore=86.0282;InbreedingCoeff=0.9657;MQ=48.07;MQ0=5;MQRankSum=-4.781;QD=41.43;ReadPosRankSum=0.310;VQSLOD=6.4722;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,111,2243	0/0:8,0:8:24.06:0,24,448	./.	0/0:5,0:3:3.01:0,3,38	0/0:19,0:19:54.17:0,54,1060	1/1:1,20:21:60.20:953,60,0	1/1:0,15:15:33.11:535,33,0	0/0:23,0:20:57.15:0,57,1114	1/1:0,9:9:27.09:437,27,0	1/1:1,20:21:63.20:1001,63,0	1/1:2,19:21:54.18:875,54,0	1/1:0,19:19:48.16:775,48,0	0/0:19,0:19:57.20:0,57,1157	0/0:14,0:14:42.14:0,42,838	1/1:0,17:16:45.15:729,45,0	1/1:2,13:15:39.13:634,39,0	1/1:1,17:18:42.14:682,42,0	1/1:2,11:13:27.09:439,27,0	1/1:2,17:17:48.16:779,48,0	1/1:2,14:15:42.13:653,42,0	1/1:0,9:9:24.08:390,24,0	1/1:1,19:20:48.12:750,48,0	1/1:3,22:25:54.12:824,54,0	1/1:0,25:25:69.24:1109,69,0	1/1:1,18:19:51.17:826,51,0	1/1:1,17:18:54.17:832,54,0	1/1:1,20:20:54.17:844,54,0	1/1:0,8:8:24.08:391,24,0
chr10	56995361	.	C	CA	15077.86	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-15.373;DP=704;FS=1.469;HRun=8;HaplotypeScore=66.8218;InbreedingCoeff=0.9946;MQ=77.06;MQ0=0;MQRankSum=-2.800;QD=29.68;ReadPosRankSum=3.953;VQSLOD=4.7446;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,114,1043	0/0:12,0:12:27.01:0,27,247	0/0:21,0:21:54:0,54,485	0/0:17,0:16:36.59:0,37,319	0/0:29,0:29:78.03:0,78,714	1/1:2,26:28:75.22:866,75,0	1/1:2,29:32:78.20:931,78,0	0/0:29,0:29:66.01:0,66,601	1/1:1,14:15:30.09:346,30,0	1/1:4,28:32:78.23:893,78,0	1/1:3,22:25:66.19:758,66,0	1/1:2,22:24:63.19:727,63,0	0/0:28,0:28:72:0,72,654	0/0:16,0:16:45.01:0,45,407	1/1:2,25:27:72.21:831,72,0	1/1:3,25:28:66.20:762,66,0	1/1:0,20:20:57.17:658,57,0	1/1:2,18:20:48.14:554,48,0	1/1:1,21:23:66.03:741,66,0	1/1:4,31:35:90.23:1022,90,0	1/1:2,19:21:57.17:658,57,0	1/1:1,22:23:63.19:727,63,0	1/1:1,26:27:67.08:764,67,0	1/1:4,29:33:87.26:1004,87,0	1/1:0,24:25:69.04:776,69,0	1/1:3,26:29:78.22:890,78,0	1/1:2,35:37:90.26:1032,90,0	1/1:0,4:4:12.04:138,12,0
chr10	56999522	.	A	ATCTCTCTC	9149.27	PASS	AB=0.651;AC=44;AF=0.786;AN=56;BaseQRankSum=-0.300;DP=609;FS=15.256;HRun=0;HaplotypeScore=191.3711;InbreedingCoeff=0.5091;MQ=61.19;MQ0=10;MQRankSum=-2.669;QD=18.15;ReadPosRankSum=-2.625;VQSLOD=2.9635;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:18,0:53:92.07:433,0,92	1/1:12,0:12:3.48:94,3,0	0/0:23,0:14:9.03:0,9,202	0/0:31,0:16:4.70:0,5,63	0/1:12,0:21:15.38:83,0,15	1/1:25,0:25:6:116,6,0	1/1:23,0:22:6.49:127,6,0	1/1:37,0:34:10.06:174,10,0	1/1:14,1:24:18.06:551,18,0	1/1:9,1:15:30.09:680,30,0	1/1:14,0:22:2.77:64,3,0	1/1:30,0:30:30.10:693,30,0	0/0:19,0:20:30.09:0,30,644	0/0:12,0:13:14.88:0,15,230	1/1:19,0:19:18.04:399,18,0	1/1:18,0:18:21.07:566,21,0	1/1:14,1:16:15.05:462,15,0	1/1:20,0:20:24.03:618,24,0	1/1:20,0:22:33.02:583,33,0	1/1:9,9:20:15.05:469,15,0	1/1:17,0:17:21.91:353,22,0	1/1:23,0:23:6.02:86,6,0	0/0:17,0:16:0.94:0,1,1	1/1:22,0:22:3.01:45,3,0	1/1:11,6:18:11.86:424,12,0	1/1:13,6:20:50.35:1261,50,0	1/1:8,7:18:21.07:745,21,0	1/1:5,1:7:3.01:124,3,0
chr10	57003190	.	CCA	C	924.40	PASS	AB=0.981;AC=21;AF=0.420;AN=50;BaseQRankSum=7.079;DP=414;FS=6.518;HRun=0;HaplotypeScore=59.0237;InbreedingCoeff=-0.0601;MQ=30.35;MQ0=55;MQRankSum=-3.787;QD=3.64;ReadPosRankSum=6.316;VQSLOD=0.4326;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:32:54.04:0,54,1027	0/0:8,0:7:17.50:0,18,165	./.	./.	0/0:12,0:9:5.69:0,6,155	0/1:20,0:17:57.23:57,0,73	1/1:14,0:9:16.45:74,16,0	0/0:16,0:15:39.02:0,39,203	0/1:20,1:20:25.63:97,0,26	0/1:18,0:18:9.16:109,0,9	1/1:20,0:18:39.03:189,39,0	0/1:13,0:11:22.66:23,0,57	0/0:12,0:8:14.93:0,15,163	0/0:12,0:12:26.94:0,27,438	0/0:22,0:21:10.55:0,11,147	0/1:13,0:13:27.01:32,0,27	0/1:19,2:14:51.23:51,0,78	0/1:8,0:5:7.54:24,0,8	0/1:14,1:14:75.24:75,0,110	0/1:10,0:10:36.32:36,0,55	1/1:3,0:2:2.74:12,3,0	1/1:12,0:10:16.17:74,16,0	0/1:15,0:15:1.23:71,0,1	0/1:15,0:8:0.75:1,0,51	./.	0/1:18,0:16:45.86:74,0,46	0/1:17,1:16:47.21:84,0,47	0/0:7,0:4:1.18:0,1,36
chr10	57003191	.	CAA	C	3720.83	PASS	AB=0.904;AC=38;AF=0.760;AN=50;BaseQRankSum=0.247;DP=417;FS=3.281;HRun=11;HaplotypeScore=50.3316;InbreedingCoeff=0.5822;MQ=30.16;MQ0=55;MQRankSum=-1.792;QD=12.44;ReadPosRankSum=2.839;VQSLOD=1.1669;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:32:52.12:0,52,646	0/0:7,0:6:4.45:0,4,80	./.	./.	0/0:12,0:8:8.25:0,8,97	1/1:9,11:17:24.04:251,24,0	1/1:5,8:9:18.04:188,18,0	1/1:17,0:16:0.40:50,0,0	1/1:6,15:20:33.01:333,33,0	1/1:5,14:19:51.01:510,51,0	1/1:4,16:18:45.02:454,45,0	1/1:7,6:11:11.99:120,12,0	0/0:13,0:10:14.16:0,14,110	0/0:14,0:12:23.99:0,24,290	0/1:22,0:21:16.74:40,0,17	1/1:3,10:13:14.89:144,15,0	0/1:16,5:14:2.08:110,0,2	1/1:8,1:6:4.66:59,5,0	1/1:8,6:13:8.10:215,8,0	1/1:3,7:10:14.99:157,15,0	1/1:3,0:2:3.01:31,3,0	1/1:2,10:10:20.79:200,21,0	1/1:2,13:15:24.02:239,24,0	1/1:9,5:7:2.99:31,3,0	./.	1/1:5,13:16:32.69:331,33,0	1/1:8,10:16:23.80:230,24,0	1/1:5,2:4:2.98:27,3,0
chr10	57003200	.	A	AG	3509.17	PASS	AB=0.941;AC=29;AF=0.580;AN=50;BaseQRankSum=-1.745;DP=417;FS=1.821;HRun=0;HaplotypeScore=50.7457;InbreedingCoeff=-0.1800;MQ=32.53;MQ0=48;MQRankSum=-4.705;QD=10.97;ReadPosRankSum=7.017;VQSLOD=3.5604;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:32:60.96:0,61,741	0/0:8,0:7:6.43:0,6,99	./.	./.	0/0:14,0:11:17.69:0,18,162	0/1:17,0:13:11.95:198,0,12	1/1:13,0:10:14.08:182,14,0	0/1:14,0:13:15.62:47,0,16	0/1:22,1:23:67.88:261,0,68	0/1:20,2:22:7.09:433,0,7	0/1:23,1:22:33.42:397,0,33	0/1:13,0:10:15.02:102,0,15	0/1:13,0:10:32.24:32,0,68	0/1:17,0:15:73.34:73,0,238	0/1:2,18:20:3.42:143,0,3	1/1:10,1:11:15.04:165,15,0	0/1:13,0:8:1.85:110,0,2	1/1:7,1:6:11.32:80,11,0	0/1:18,0:17:10.07:181,0,10	0/1:9,0:9:21.92:136,0,22	0/1:2,1:2:14.64:25,0,15	1/1:10,0:10:21.04:215,21,0	1/1:14,0:14:20.33:218,20,0	0/1:14,0:7:0.17:26,0,0	./.	1/1:19,0:17:8.62:263,9,0	0/1:17,0:16:17.07:201,0,17	1/1:7,0:4:4.83:20,5,0
chr10	57003201	.	AAG	A	1555.64	PASS	AB=0.982;AC=31;AF=0.596;AN=52;BaseQRankSum=3.390;DP=419;FS=5.460;HRun=0;HaplotypeScore=61.6495;InbreedingCoeff=-0.0499;MQ=32.54;MQ0=48;MQRankSum=-5.300;QD=4.69;ReadPosRankSum=5.773;VQSLOD=0.9655;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:36,0:32:19.14:19,0,273	0/1:7,1:7:18.06:18,0,63	./.	./.	0/1:13,1:11:8.24:8,0,91	0/1:17,0:13:14.93:74,0,15	1/1:13,0:10:16.79:79,17,0	1/1:5,9:13:30.41:278,30,0	0/1:23,0:23:34.08:106,0,34	0/1:24,0:23:0.95:107,0,1	0/1:24,0:22:23.74:157,0,24	1/1:12,1:10:17.35:121,17,0	0/0:13,0:10:7.37:0,7,92	0/0:17,0:15:32.85:0,33,290	0/0:20,0:20:0.10:0,0,93	1/1:11,0:11:11.77:58,12,0	0/1:12,0:8:5.57:36,0,6	0/1:8,0:6:19.10:19,0,19	1/1:21,0:20:5.64:67,6,0	0/1:9,0:9:29.68:45,0,30	0/1:3,0:2:6.73:7,0,19	1/1:10,0:10:19.01:86,19,0	1/1:14,0:14:25.68:136,26,0	1/1:14,1:8:5.80:40,6,0	0/0:23,0:22:2.99:0,3,24	1/1:20,0:17:9.73:135,10,0	0/1:15,1:15:0.35:110,0,0	0/1:7,0:4:7.08:7,0,34
chr10	57003271	.	AGAAGAC	A	7408.54	PASS	AB=0.986;AC=30;AF=0.536;AN=56;BaseQRankSum=-7.045;DP=617;FS=0.709;HRun=0;HaplotypeScore=120.9207;InbreedingCoeff=0.2650;MQ=62.04;MQ0=32;MQRankSum=3.321;QD=17.31;ReadPosRankSum=6.943;VQSLOD=3.8637;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:51:99:0,133,1009	0/0:7,0:7:20.98:0,21,369	0/0:19,0:13:9.57:0,10,238	0/0:9,0:7:20.88:0,21,166	0/0:22,0:22:65.39:0,65,669	0/1:19,0:18:31.77:247,0,32	1/1:26,0:22:48.21:494,48,0	0/0:39,0:27:74.27:0,74,556	0/1:27,0:26:99:298,0,182	0/1:35,0:35:99:480,0,144	0/1:25,0:24:90:278,0,90	1/1:16,0:15:42.03:461,42,0	0/0:12,0:11:23.88:0,24,263	0/0:28,0:26:73.45:0,73,685	0/1:24,0:24:99:262,0,150	1/1:16,0:16:20.77:318,21,0	1/1:37,0:37:89.09:841,89,0	1/1:15,0:15:1.67:260,2,0	0/1:18,0:14:8.17:259,0,8	0/1:20,0:19:26.56:332,0,27	1/1:13,0:12:13.05:241,13,0	1/1:18,0:18:50.39:436,50,0	1/1:11,2:12:29.96:356,30,0	1/1:25,0:25:59.82:572,60,0	1/1:20,0:20:9.94:225,10,0	0/1:23,1:22:4.94:464,0,5	0/1:28,0:28:12.29:474,0,12	0/1:8,1:8:26.32:110,0,26
chr10	57003732	.	TACACACAC	T	2974.27	PASS	AB=0.773;AC=33;AF=0.660;AN=50;BaseQRankSum=6.562;DP=585;FS=23.877;HRun=0;HaplotypeScore=159.4710;InbreedingCoeff=0.1882;MQ=57.91;MQ0=8;MQRankSum=-7.959;QD=6.88;ReadPosRankSum=1.936;VQSLOD=1.2744;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:46:50.98:0,51,1308	1/1:5,4:9:6.02:126,6,0	./.	./.	0/0:11,0:13:18.03:0,18,380	1/1:16,0:14:6.62:47,7,0	1/1:10,11:21:5.83:148,6,0	1/1:28,0:27:8.13:94,8,0	0/1:13,1:21:46.77:162,0,47	0/1:19,0:26:65.18:131,0,65	1/1:5,3:14:2.41:160,2,0	1/1:13,11:24:13.71:362,14,0	0/0:14,0:18:24.08:0,24,878	0/0:18,0:18:24.05:0,24,759	0/1:15,5:26:10.77:188,0,11	1/1:9,12:23:27.09:654,27,0	0/1:13,7:21:2.05:140,0,2	1/1:8,8:17:4.79:91,5,0	0/1:13,0:11:19.98:39,0,20	1/1:8,5:14:0.73:24,1,0	0/1:35,0:51:46.26:68,0,46	1/1:12,15:27:2.99:75,3,0	1/1:7,7:14:12.02:259,12,0	1/1:21,12:35:6.02:128,6,0	0/0:12,0:14:0:0,0,0	0/1:12,1:19:76.06:98,0,76	1/1:5,1:11:14.62:139,15,0	./.
chr10	57003961	.	AG	A	5682.54	PASS	AB=0.533;AC=17;AF=0.304;AN=56;BaseQRankSum=12.029;DP=702;FS=0.000;HRun=5;HaplotypeScore=61.4506;InbreedingCoeff=0.9314;MQ=57.26;MQ0=15;MQRankSum=5.559;QD=25.95;ReadPosRankSum=3.416;VQSLOD=4.1244;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,117,1548	0/0:13,0:13:39.13:0,39,532	0/0:17,0:6:18.02:0,18,222	0/0:26,0:8:23.77:0,24,253	0/0:27,0:27:72.21:0,72,930	1/1:1,25:26:66.15:734,66,0	1/1:2,21:21:45.13:510,45,0	0/0:30,0:25:72.22:0,72,954	0/0:26,0:26:69.23:0,69,943	0/0:29,0:28:78.24:0,78,1037	0/0:14,0:13:36.08:0,36,458	1/1:2,19:21:45.13:510,45,0	0/0:26,0:25:66.22:0,66,901	0/0:31,0:31:90.27:0,90,1192	0/0:29,0:29:75.10:0,75,963	1/1:1,18:18:51.15:578,51,0	1/1:4,30:33:75.21:851,75,0	1/1:4,16:20:45.13:510,45,0	0/0:24,0:22:54.18:0,54,735	0/0:22,0:22:48.12:0,48,610	0/0:40,0:40:99:0,120,1593	0/1:3,21:24:5.97:569,0,6	1/1:2,14:15:36.10:400,36,0	1/1:4,32:36:90.25:1021,90,0	0/0:18,0:18:48.13:0,48,624	0/0:27,0:27:81.27:0,81,1105	0/0:23,0:23:57.16:0,57,743	0/0:18,0:18:51.13:0,51,648
chr10	57005404	.	AG	A	1590.98	PASS	AB=0.980;AC=34;AF=0.607;AN=56;BaseQRankSum=4.536;DP=446;FS=2.607;HRun=1;HaplotypeScore=97.5732;InbreedingCoeff=0.1096;MQ=41.99;MQ0=13;MQRankSum=-2.690;QD=4.35;ReadPosRankSum=2.164;VQSLOD=0.7222;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:71.10:0,71,677	1/1:6,0:6:11.60:77,12,0	0/1:27,0:4:10.32:10,0,21	0/1:18,0:5:4.39:9,0,4	0/0:16,0:16:37.98:0,38,374	0/1:14,1:15:10.42:73,0,10	1/1:11,0:9:9.59:82,10,0	1/1:24,0:22:7.20:177,7,0	1/1:10,0:9:18.60:104,19,0	0/1:12,1:13:2.68:57,0,3	0/1:15,1:14:26.27:70,0,26	1/1:10,0:9:1.39:33,1,0	0/0:17,0:17:39.62:0,40,313	0/0:14,0:14:38.76:0,39,323	0/1:8,0:7:16.99:33,0,17	1/1:14,0:11:13.80:98,14,0	0/1:23,0:20:1.11:79,0,1	1/1:12,1:12:11.01:74,11,0	0/1:17,0:16:32.35:32,0,72	0/1:17,0:15:40.34:40,0,46	0/0:2,1:3:1.19:0,1,3	0/1:19,0:19:3.78:89,0,4	0/1:18,0:18:5.36:93,0,5	1/1:9,0:7:4.37:24,4,0	1/1:19,2:20:18.19:120,18,0	0/1:18,1:17:39.67:57,0,40	1/1:22,2:23:24.45:179,24,0	1/1:11,2:12:27.71:151,28,0
chr10	57005407	.	A	AC	1869.66	PASS	AB=0.968;AC=28;AF=0.500;AN=56;BaseQRankSum=5.459;DP=458;FS=12.113;HRun=1;HaplotypeScore=99.7144;InbreedingCoeff=0.0058;MQ=41.93;MQ0=13;MQRankSum=-8.191;QD=5.31;ReadPosRankSum=0.651;VQSLOD=-0.6464;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:81.06:0,81,936	0/0:5,1:6:11.28:0,11,65	0/1:27,0:4:3.44:3,0,54	0/0:17,0:5:6.67:0,7,49	0/0:16,0:16:36.88:0,37,466	1/1:13,2:15:24.73:198,25,0	0/1:10,1:9:13.71:61,0,14	0/1:26,0:24:28.62:29,0,213	0/1:10,0:9:43.23:43,0,48	0/1:15,0:15:13.39:89,0,13	0/1:17,1:16:7.63:97,0,8	1/1:9,0:9:6.72:51,7,0	0/0:17,0:17:45.41:0,45,465	0/0:15,0:15:38.70:0,39,410	0/1:12,0:11:18.34:18,0,43	0/1:13,1:11:17.40:73,0,17	1/1:19,2:18:6.24:98,6,0	1/1:12,0:11:1.19:72,1,0	0/1:18,1:18:66.44:108,0,66	1/1:17,1:17:9.07:138,9,0	0/0:3,0:4:3.26:0,3,10	1/1:14,4:18:36.96:268,37,0	0/1:15,2:17:4.54:139,0,5	0/1:10,0:8:19.95:30,0,20	1/1:21,1:20:21.28:164,21,0	0/1:18,1:17:0.70:108,0,1	0/1:22,1:22:20.62:138,0,21	0/1:14,0:13:4.95:118,0,5
chr10	57005408	.	C	CCAAAA	6938.37	PASS	AB=0.966;AC=39;AF=0.696;AN=56;BaseQRankSum=7.225;DP=477;FS=0.439;HRun=0;HaplotypeScore=117.8818;InbreedingCoeff=0.3446;MQ=42.24;MQ0=12;MQRankSum=-7.329;QD=17.48;ReadPosRankSum=-0.620;VQSLOD=4.1147;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:80.14:0,80,1464	0/1:6,0:6:16.11:21,0,16	0/1:27,0:4:2.19:2,0,99	0/1:17,0:5:1.44:1,0,55	0/0:17,0:18:41.72:0,42,761	1/1:16,0:16:42.87:540,43,0	1/1:11,0:10:12.31:197,12,0	0/1:27,0:25:70.45:154,0,70	0/1:11,1:11:32.87:241,0,33	1/1:16,0:16:5.43:393,5,0	1/1:18,0:16:25.62:359,26,0	1/1:8,0:9:20.93:269,21,0	0/0:17,0:17:45.18:0,45,585	0/0:15,0:15:37.50:0,37,583	0/1:11,1:11:9.98:383,0,10	0/1:14,0:11:2.62:235,0,3	1/1:21,0:19:26.85:341,27,0	0/1:11,0:11:0.21:174,0,0	1/1:19,0:19:15.09:358,15,0	1/1:17,0:17:34.09:416,34,0	1/1:4,0:4:6.21:31,6,0	1/1:18,0:18:33.08:587,33,0	1/1:17,0:17:23.95:344,24,0	1/1:11,0:10:8.50:101,9,0	1/1:13,7:25:36.60:422,37,0	1/1:21,0:18:29.82:509,30,0	0/1:22,1:23:23.37:552,0,23	1/1:13,1:13:29.42:309,29,0
chr10	57005419	.	AG	A	3826.75	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=9.573;DP=473;FS=2.941;HRun=1;HaplotypeScore=93.8750;InbreedingCoeff=0.9024;MQ=52.45;MQ0=5;MQRankSum=-8.611;QD=11.39;ReadPosRankSum=-1.731;VQSLOD=1.3435;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:71.04:0,71,763	1/1:6,0:6:14.50:95,14,0	0/0:37,0:10:11.98:0,12,120	0/0:20,0:7:2.08:0,2,92	0/0:22,0:22:55.47:0,55,552	1/1:16,0:16:43.51:253,44,0	1/1:11,1:10:22.73:177,23,0	1/1:26,0:24:35.56:217,36,0	1/1:11,0:10:10.55:56,11,0	1/1:16,0:16:38.57:230,39,0	1/1:15,1:16:34.81:229,35,0	1/1:9,0:8:18.99:79,19,0	0/0:16,1:17:21.25:0,21,330	0/0:12,0:12:28.63:0,29,315	1/1:14,0:13:12.84:133,13,0	1/1:9,2:9:23.57:176,24,0	1/1:19,0:18:19.17:99,19,0	1/1:8,0:8:10.15:67,10,0	1/1:16,1:17:40.85:232,41,0	1/1:18,1:18:32.49:217,32,0	1/1:5,1:6:15.09:85,15,0	1/1:11,5:16:42.57:337,43,0	1/1:12,3:15:27.85:204,28,0	1/1:7,2:9:7.62:36,8,0	1/1:29,0:27:39.57:221,40,0	1/1:20,1:18:49.14:317,49,0	1/1:27,0:27:33.24:212,33,0	1/1:13,0:12:26.43:153,26,0
chr10	57005420	.	GAA	G	2213.75	PASS	AB=0.964;AC=28;AF=0.500;AN=56;BaseQRankSum=3.357;DP=475;FS=33.566;HRun=11;HaplotypeScore=104.1218;InbreedingCoeff=-0.0800;MQ=53.80;MQ0=5;MQRankSum=0.100;QD=7.07;ReadPosRankSum=1.617;VQSLOD=-0.4610;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:27:75.08:0,75,1253	1/1:6,0:6:14.87:151,15,0	0/0:38,0:11:27.03:0,27,322	0/0:20,0:7:6.44:0,6,152	0/0:21,0:21:57.18:0,57,958	1/1:15,1:16:9.37:209,9,0	0/1:12,0:10:17.35:103,0,17	0/1:14,12:24:72.32:302,0,72	0/1:11,0:10:28.03:28,0,41	0/1:16,0:16:65.37:65,0,152	0/1:16,0:16:51.66:80,0,52	0/1:9,0:8:24.09:69,0,24	0/0:16,0:16:42.13:0,42,643	0/0:12,0:12:36.11:0,36,593	1/1:14,0:13:5.24:150,5,0	1/1:11,0:9:8.83:110,9,0	0/1:19,0:18:1.28:11,0,1	1/1:8,0:8:0.98:23,1,0	0/1:18,0:18:84.07:261,0,84	0/1:19,0:18:33.13:145,0,33	0/1:5,1:6:30.27:66,0,30	1/1:17,0:17:18.88:170,19,0	0/1:15,0:15:7.18:114,0,7	1/1:8,1:9:0.62:26,1,0	0/1:30,0:28:75.05:86,0,75	0/1:21,1:19:6.21:180,0,6	0/0:27,0:27:2.44:0,2,147	0/1:13,0:12:33.29:33,0,62
chr10	57005422	.	A	AG	2612.11	PASS	AB=0.788;AC=26;AF=0.464;AN=56;BaseQRankSum=3.756;DP=488;FS=24.114;HRun=0;HaplotypeScore=96.2437;InbreedingCoeff=-0.3347;MQ=56.76;MQ0=4;MQRankSum=0.859;QD=7.46;ReadPosRankSum=4.710;VQSLOD=1.4447;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:27:75.24:0,75,1022	1/1:6,0:6:14.71:107,15,0	0/0:40,0:13:30.02:0,30,338	0/0:20,0:7:4.93:0,5,147	0/0:21,0:21:57.18:0,57,771	0/1:13,1:17:33.36:230,0,33	0/1:10,0:10:34.80:64,0,35	0/1:25,0:23:44.17:144,0,44	0/1:6,5:10:42.95:43,0,51	0/1:10,7:17:99:153,0,185	0/1:10,6:18:81.89:113,0,82	1/1:7,1:8:15.60:125,16,0	0/0:16,0:16:40.35:0,40,501	0/0:13,0:13:39.04:0,39,489	0/1:12,0:13:11.54:156,0,12	0/1:8,0:9:33.68:87,0,34	1/1:5,0:19:16.19:107,16,0	1/1:3,0:8:1.27:49,1,0	0/1:6,0:20:99:248,0,102	0/1:9,10:20:59.58:152,0,60	0/1:7,0:7:43.05:43,0,54	0/1:11,0:18:14.73:230,0,15	0/1:13,0:15:39.33:108,0,39	0/1:4,1:11:11.51:20,0,12	0/1:27,0:26:86.23:86,0,95	0/1:11,10:19:86.75:304,0,87	0/1:13,1:29:99:165,0,116	0/1:12,0:11:50.26:50,0,79
chr10	57005425	.	AAG	A	416.22	PASS	AB=0.986;AC=20;AF=0.357;AN=56;BaseQRankSum=1.221;DP=479;FS=26.475;HRun=0;HaplotypeScore=105.9157;InbreedingCoeff=-0.3738;MQ=61.24;MQ0=4;MQRankSum=1.557;QD=1.44;ReadPosRankSum=-2.933;VQSLOD=-0.0832;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:70.43:0,70,1202	1/1:6,0:6:6.17:33,6,0	0/0:38,0:16:29:0,29,446	0/1:19,0:6:7.56:8,0,161	0/0:23,0:23:60.04:0,60,963	0/1:14,0:14:25.09:68,0,25	0/1:10,0:9:12.45:12,0,14	0/1:24,1:23:82.80:83,0,170	0/1:11,0:10:7.85:8,0,37	0/0:18,0:18:2.13:0,2,234	0/1:16,0:16:4.44:4,0,136	0/1:8,1:8:13.06:13,0,48	0/0:16,0:16:43.72:0,44,565	0/0:13,0:13:37.95:0,38,576	0/1:12,1:12:18.72:39,0,19	0/1:12,0:10:20.42:20,0,55	0/0:17,0:16:11.10:0,11,56	0/0:7,0:7:9.21:0,9,34	0/1:21,0:21:60.70:61,0,149	0/1:21,1:21:63.63:64,0,84	0/1:7,0:7:18.26:18,0,40	0/1:17,0:17:24.14:24,0,82	0/1:15,0:15:14.11:32,0,14	0/1:11,0:11:6.68:17,0,7	0/1:24,0:22:6.28:6,0,57	0/1:24,0:21:52.08:52,0,125	0/0:29,0:29:30.55:0,31,269	0/1:12,0:11:10.79:11,0,38
chr10	57005635	.	ATT	A	5433.40	PASS	AB=0.685;AC=27;AF=0.482;AN=56;BaseQRankSum=-3.955;DP=582;FS=20.514;HRun=13;HaplotypeScore=92.9550;InbreedingCoeff=0.8085;MQ=68.53;MQ0=1;MQRankSum=-2.401;QD=17.76;ReadPosRankSum=2.120;VQSLOD=2.2449;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:40:89.63:0,90,1100	1/1:1,0:8:13.71:60,14,0	0/0:17,0:14:27.91:0,28,259	0/1:8,1:7:8.92:9,0,56	0/0:28,0:29:55.71:0,56,1062	0/0:2,1:20:16.82:0,17,131	0/0:5,0:22:45.42:0,45,171	1/1:5,0:29:62.72:270,63,0	1/1:2,18:23:50.70:575,51,0	1/1:9,11:21:35.71:332,36,0	1/1:4,11:17:4.03:268,4,0	0/0:9,0:13:23.27:0,23,102	0/0:10,0:21:50.75:0,51,463	0/0:18,0:18:40.91:0,41,499	1/1:2,24:26:63.09:611,63,0	0/0:6,1:17:4.88:0,5,144	0/0:7,1:27:25.34:0,25,228	0/1:3,1:15:1.14:1,0,58	1/1:5,17:23:56.39:487,56,0	0/1:6,11:18:1.91:286,0,2	1/1:1,19:22:41.71:440,42,0	0/0:3,0:9:17.86:0,18,94	0/0:3,0:19:45.48:0,45,224	0/0:5,0:23:48.02:0,48,181	1/1:4,14:18:33.01:320,33,0	1/1:3,25:29:77.50:708,78,0	1/1:4,24:28:63.06:610,63,0	1/1:0,18:19:42.02:457,42,0
chr10	57006090	.	CTCTGCAGG	C	13395.17	PASS	AB=0.944;AC=23;AF=0.411;AN=56;BaseQRankSum=16.665;DP=573;FS=2.475;HRun=0;HaplotypeScore=154.2923;InbreedingCoeff=0.9022;MQ=77.11;MQ0=0;MQRankSum=-16.845;QD=58.75;ReadPosRankSum=2.327;VQSLOD=4.9828;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:75.26:0,75,3084	0/0:7,0:7:21.07:0,21,892	0/0:16,0:16:33.05:0,33,919	0/0:17,0:17:45.11:0,45,1271	0/0:27,0:27:78.25:0,78,3251	0/0:23,0:23:66.23:0,66,2838	0/0:27,0:27:78.27:0,78,3347	0/0:28,0:28:75.26:0,75,3182	1/1:3,16:19:39.13:1025,39,0	1/1:1,18:19:54.19:1483,54,0	1/1:4,14:18:36.12:985,36,0	0/0:19,0:19:54.19:0,54,2318	0/0:25,0:25:75.26:0,75,3250	0/0:18,0:18:51.18:0,51,2222	1/1:4,15:19:45.15:1148,45,0	0/1:16,1:17:34.94:35,0,1896	0/0:25,0:25:69.24:0,69,2994	0/0:18,0:18:48.16:0,48,2077	1/1:4,21:25:63.22:1709,63,0	1/1:2,31:33:84.29:2279,84,0	1/1:2,10:12:9.03:249,9,0	0/0:28,0:28:84.29:0,84,3545	0/0:21,0:21:57.20:0,57,2422	0/0:19,0:19:54.19:0,54,2257	1/1:1,19:20:45.15:1246,45,0	1/1:0,19:19:57.20:1573,57,0	1/1:2,21:23:54.19:1496,54,0	1/1:2,2:4:6.02:166,6,0
chr10	57006398	.	C	CAAA	6257.87	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-3.323;DP=450;FS=3.067;HRun=12;HaplotypeScore=83.7441;InbreedingCoeff=0.8813;MQ=55.73;MQ0=9;MQRankSum=-5.372;QD=20.72;ReadPosRankSum=-3.592;VQSLOD=3.1689;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:50:99:0,112,1239	0/0:4,0:4:6:0,6,67	0/0:10,0:7:7.34:0,7,113	0/0:12,0:10:3.55:0,4,137	0/0:16,0:17:28.08:0,28,312	1/1:6,7:13:24.05:387,24,0	1/1:4,11:21:21.01:317,21,0	0/0:24,0:24:62.97:0,63,657	1/1:6,3:9:6.02:110,6,0	1/1:3,9:14:27.06:422,27,0	1/1:3,3:10:14.01:141,14,0	1/1:8,3:12:28.79:343,29,0	0/0:12,0:12:23.95:0,24,269	0/0:16,0:17:26.74:0,27,286	1/1:7,7:16:21.03:303,21,0	1/1:4,5:9:15.05:274,15,0	1/1:16,10:31:57.14:756,57,0	1/1:9,15:25:33.07:534,33,0	1/1:8,6:15:25.31:365,25,0	1/1:3,6:12:14.81:99,15,0	1/1:6,5:9:6:78,6,0	1/1:7,2:9:14.99:179,15,0	1/1:3,9:11:11.79:220,12,0	1/1:6,8:16:24.04:358,24,0	1/1:3,10:14:26.98:348,27,0	1/1:2,11:17:32.49:494,32,0	1/1:13,7:22:18.06:318,18,0	1/1:0,3:5:13.29:211,13,0
chr10	57007905	.	T	TCTC	1507.46	PASS	AB=0.944;AC=39;AF=0.722;AN=54;BaseQRankSum=-0.010;DP=252;FS=3.837;HRun=0;HaplotypeScore=64.0274;InbreedingCoeff=0.6430;MQ=80.17;MQ0=1;MQRankSum=-2.640;QD=9.79;ReadPosRankSum=0.991;VQSLOD=2.7206;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:25:59.66:0,60,495	0/0:2,0:2:6:0,6,52	0/0:13,0:11:22.64:0,23,234	0/1:15,0:17:29.30:29,0,263	0/0:19,0:19:29.70:0,30,245	1/1:9,0:9:14.87:111,15,0	1/1:9,0:9:20.80:156,21,0	0/0:15,0:16:41.91:0,42,383	1/1:8,0:8:17.83:126,18,0	1/1:5,0:5:9.43:72,9,0	1/1:4,0:4:2.99:24,3,0	1/1:3,0:3:8.88:61,9,0	0/0:11,0:11:27.29:0,27,215	0/0:10,0:11:4.01:0,4,207	1/1:8,0:8:14.87:109,15,0	1/1:8,0:8:2.91:23,3,0	1/1:6,0:6:14.79:131,15,0	1/1:5,0:5:14.91:113,15,0	1/1:8,0:7:12.42:102,12,0	1/1:6,0:6:8.92:76,9,0	1/1:12,0:12:23.49:191,23,0	1/1:0,4:5:3.01:64,3,0	1/1:1,0:1:2.90:16,3,0	1/1:6,0:6:8.72:55,9,0	1/1:10,0:10:3.01:53,3,0	1/1:11,0:11:15.01:139,15,0	1/1:13,0:13:2.89:40,3,0	./.
chr10	57007906	.	C	CT	1204.99	PASS	AB=1.000;AC=34;AF=0.630;AN=54;BaseQRankSum=-1.560;DP=244;FS=11.621;HRun=1;HaplotypeScore=52.0792;InbreedingCoeff=0.6201;MQ=80.85;MQ0=1;MQRankSum=-2.135;QD=9.56;ReadPosRankSum=1.876;VQSLOD=0.0083;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:59.64:0,60,482	0/0:2,0:2:6:0,6,52	0/0:14,0:11:28.40:0,28,227	0/0:17,0:17:15.84:0,16,282	0/0:18,0:18:25.92:0,26,213	1/1:9,0:9:14.87:111,15,0	1/1:9,0:9:20.80:156,21,0	0/0:16,0:16:41.82:0,42,343	1/1:8,0:8:17.83:126,18,0	1/1:4,0:4:8.15:69,8,0	1/1:3,0:3:2.99:24,3,0	0/1:3,0:3:8.83:12,0,9	0/0:11,0:11:26.73:0,27,201	0/0:9,0:9:4:0,4,169	1/1:8,0:8:14.87:108,15,0	0/0:2,6:8:2.04:0,2,6	1/1:5,0:5:11.78:74,12,0	1/1:6,0:6:14.91:112,15,0	0/1:8,0:7:12.36:58,0,12	1/1:0,6:6:8.92:76,9,0	1/1:14,0:14:23.92:191,24,0	1/1:4,0:4:2.98:21,3,0	1/1:1,0:1:2.90:16,3,0	1/1:6,0:6:8.72:54,9,0	1/1:1,1:10:3:28,3,0	1/1:9,0:10:15.01:139,15,0	1/1:1,0:12:2.90:16,3,0	./.
chr10	57007916	.	CCG	C	301.25	PASS	AB=1.000;AC=6;AF=0.111;AN=54;BaseQRankSum=4.251;DP=282;FS=2.067;HRun=0;HaplotypeScore=45.0703;InbreedingCoeff=0.5134;MQ=79.94;MQ0=1;MQRankSum=1.988;QD=6.15;ReadPosRankSum=3.829;VQSLOD=2.1050;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:62.94:0,63,590	1/1:1,0:1:3:26,3,0	0/1:14,0:12:46.20:46,0,133	0/1:15,0:16:3.69:4,0,180	0/0:17,0:17:25.63:0,26,210	0/0:9,0:9:17.87:0,18,135	0/0:10,0:10:17.83:0,18,131	1/1:3,14:17:32.98:345,33,0	0/0:7,0:7:17.81:0,18,133	0/0:10,0:10:21.84:0,22,180	0/0:5,0:5:12.85:0,13,97	0/0:14,0:14:34.91:0,35,320	0/0:15,0:15:26.63:0,27,213	0/0:13,0:13:38.84:0,39,374	0/0:12,0:12:26.85:0,27,211	0/0:9,0:9:20.87:0,21,195	0/0:12,0:12:29.70:0,30,213	0/0:10,0:10:19.68:0,20,159	0/0:12,0:11:29.89:0,30,289	0/0:4,0:4:11.61:0,12,79	0/0:7,0:7:15.45:0,15,124	0/0:9,0:9:20.98:0,21,175	0/0:5,0:5:11.99:0,12,100	0/0:7,0:7:8.96:0,9,70	0/0:7,0:7:14.94:0,15,117	0/0:9,0:9:17.91:0,18,143	0/0:5,0:5:11.73:0,12,86	./.
chr10	57009467	.	A	AT	7844.30	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=0.878;DP=390;FS=76.347;HRun=4;HaplotypeScore=54.2834;InbreedingCoeff=0.9515;MQ=68.23;MQ0=0;MQRankSum=-12.566;QD=31.89;ReadPosRankSum=0.748;VQSLOD=-0.3874;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:87.23:0,87,977	1/1:1,8:9:18.06:246,18,0	0/0:20,0:20:46.23:0,46,582	0/0:20,0:20:58.71:0,59,638	0/0:33,0:33:90.24:0,90,1011	1/1:1,13:14:30.10:410,30,0	1/1:2,9:11:24.08:328,24,0	1/1:3,18:21:54.16:714,54,0	1/1:1,10:11:30.10:409,30,0	1/1:2,11:13:32.98:451,33,0	1/1:2,8:10:17.57:245,18,0	1/1:1,11:12:30.10:410,30,0	0/0:22,0:22:63.16:0,63,705	0/0:19,0:19:57.15:0,57,637	1/1:1,7:8:23.44:294,23,0	1/1:0,8:8:24.08:328,24,0	1/1:1,6:7:18.02:225,18,0	1/1:3,6:9:15.05:205,15,0	1/1:4,10:14:32.59:416,33,0	1/1:2,7:9:23.75:298,24,0	1/1:0,8:8:24.08:328,24,0	1/1:0,9:9:27.09:368,27,0	1/1:0,10:10:15.02:185,15,0	1/1:1,3:4:6.02:82,6,0	1/1:0,11:11:21.07:284,21,0	1/1:2,17:19:51.17:697,51,0	1/1:2,21:23:62.94:832,63,0	1/1:1,5:6:8.39:90,8,0
chr10	57010536	.	AACACACACACACACACACAC	A	6656.71	PASS	AC=40;AF=0.741;AN=54;BaseQRankSum=5.827;DP=381;FS=36.688;HRun=0;HaplotypeScore=205.0285;InbreedingCoeff=0.7722;MQ=50.24;MQ0=8;MQRankSum=-4.536;QD=27.39;ReadPosRankSum=2.740;VQSLOD=2.3595;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:33.05:0,33,1869	1/1:0,0:1:3.01:68,3,0	0/0:20,0:7:6.02:0,6,103	0/0:22,0:15:11.89:0,12,332	0/0:18,0:19:39.13:0,39,3271	1/1:9,3:12:15.05:580,15,0	1/1:9,0:7:3:25,3,0	0/0:22,0:21:23.94:0,24,265	1/1:14,2:16:8.96:320,9,0	1/1:10,1:11:11.90:220,12,0	1/1:6,2:8:6.02:281,6,0	1/1:15,6:21:21.06:967,21,0	0/0:16,0:17:32.70:0,33,2758	0/0:18,0:18:39.09:0,39,2772	1/1:13,0:13:6.01:102,6,0	1/1:15,5:21:27.07:1048,27,0	1/1:11,3:14:14.93:346,15,0	1/1:10,0:10:14.88:107,15,0	1/1:20,1:21:23.90:323,24,0	1/1:5,2:7:6.02:286,6,0	1/1:10,0:10:8.87:65,9,0	1/1:8,2:8:6.02:293,6,0	1/1:6,2:8:12.01:333,12,0	1/1:11,4:15:15.03:636,15,0	1/1:7,0:7:3:26,3,0	1/1:12,1:13:29.36:326,29,0	1/1:15,1:16:17.93:304,18,0	./.
chr10	57010584	.	T	TA	2300.78	PASS	AB=0.613;AC=42;AF=0.750;AN=56;BaseQRankSum=12.888;DP=361;FS=62.368;HRun=0;HaplotypeScore=132.6792;InbreedingCoeff=0.7193;MQ=51.17;MQ0=9;MQRankSum=-12.242;QD=11.22;ReadPosRankSum=0.927;VQSLOD=1.7409;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:27:47.65:0,48,729	1/1:1,1:1:3.01:30,3,0	0/0:25,0:9:18.91:0,19,198	0/0:26,0:9:23.39:0,23,245	0/0:26,0:26:67.24:0,67,807	1/1:13,0:13:36.14:182,36,0	1/1:13,0:12:30.67:157,31,0	1/1:7,0:17:20.01:92,20,0	1/1:3,7:10:22.54:157,23,0	0/1:2,2:5:8.49:62,0,8	1/1:1,5:6:10.87:54,11,0	1/1:19,0:19:50.60:282,51,0	0/0:23,0:23:63.75:0,64,833	0/0:28,0:28:77.74:0,78,962	1/1:2,6:8:17.33:128,17,0	1/1:12,0:12:29.74:156,30,0	1/1:13,0:13:19.85:113,20,0	1/1:7,0:7:17.84:123,18,0	1/1:5,9:15:5.07:244,5,0	0/1:2,4:6:1.69:54,0,2	1/1:3,6:9:11.68:74,12,0	1/1:6,0:5:13.08:55,13,0	1/1:11,0:11:29.06:131,29,0	1/1:16,0:16:3.36:65,3,0	1/1:0,4:4:8.91:63,9,0	1/1:0,6:6:15.03:150,15,0	1/1:1,4:5:8.64:54,9,0	1/1:0,2:2:6.01:60,6,0
chr10	57010588	.	A	AG	2884.89	PASS	AB=0.990;AC=25;AF=0.446;AN=56;BaseQRankSum=12.350;DP=436;FS=22.250;HRun=0;HaplotypeScore=151.8516;InbreedingCoeff=0.6104;MQ=50.24;MQ0=7;MQRankSum=-9.871;QD=14.28;ReadPosRankSum=5.457;VQSLOD=3.0738;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:30:67.66:0,68,814	0/1:4,0:3:1.51:2,0,32	0/1:24,0:9:9.05:9,0,139	0/0:25,0:10:22.98:0,23,185	0/0:25,0:25:69.16:0,69,852	1/1:0,14:14:39.08:416,39,0	1/1:3,14:16:33.05:365,33,0	0/0:26,0:26:70.98:0,71,430	0/1:18,1:19:14.14:14,0,147	0/0:9,0:9:8.48:0,8,133	0/0:9,0:9:11.08:0,11,66	1/1:2,19:21:57.10:646,57,0	0/0:22,0:22:66.17:0,66,841	0/0:28,0:28:84.13:0,84,1050	0/0:15,0:15:15.11:0,15,140	1/1:0,12:12:36.07:392,36,0	1/1:2,13:15:20.82:253,21,0	1/1:0,8:8:21.07:279,21,0	0/1:18,0:18:35.59:36,0,131	0/0:12,0:12:14.79:0,15,113	0/0:13,0:13:6.28:0,6,43	1/1:0,6:6:15.01:139,15,0	1/1:2,11:13:32.97:313,33,0	1/1:3,15:19:19.05:184,19,0	0/0:9,0:9:9.83:0,10,76	0/1:10,0:10:27.47:27,0,45	0/0:9,0:9:10.08:0,10,85	1/1:2,0:2:4.74:17,5,0
chr10	57011391	.	CGACT	C	6780.76	PASS	AB=0.997;AC=29;AF=0.518;AN=56;BaseQRankSum=0.810;DP=745;FS=2.015;HRun=0;HaplotypeScore=144.1493;InbreedingCoeff=0.0746;MQ=69.47;MQ0=5;MQRankSum=0.836;QD=12.82;ReadPosRankSum=2.665;VQSLOD=4.3751;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,150,2941	0/1:12,0:12:29.24:29,0,31	0/0:23,0:15:32.22:0,32,371	0/0:29,0:22:62.82:0,63,672	0/0:25,0:25:72.07:0,72,1118	1/1:0,21:21:21.07:397,21,0	1/1:1,23:24:18.06:321,18,0	0/0:30,0:30:71.93:0,72,637	0/1:14,0:35:19.26:80,0,19	0/1:42,0:41:99:546,0,307	0/1:9,0:24:18.05:19,0,18	1/1:0,30:30:54.18:1023,54,0	0/0:29,0:29:83.89:0,84,1597	0/0:26,0:26:72.10:0,72,1320	0/1:9,0:23:15.98:16,0,51	1/1:0,19:19:24.08:455,24,0	1/1:2,38:40:63.22:1193,63,0	0/1:25,1:26:99:261,0,347	0/1:30,0:29:99:425,0,127	0/1:17,0:17:14.31:195,0,14	0/1:33,0:33:14.39:251,0,14	1/1:0,19:19:30.10:566,30,0	1/1:0,16:16:9.03:170,9,0	1/1:1,27:28:23.82:454,24,0	0/1:12,0:28:14.50:44,0,14	0/1:11,0:32:99:294,0,315	0/1:5,0:19:14.97:15,0,65	0/1:2,0:10:29.96:30,0,55
chr10	57011421	.	ACAGACAGACAGATAGACAGG	A	1626.34	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.609;DP=739;FS=13.668;HRun=0;HaplotypeScore=361.5840;InbreedingCoeff=0.9659;MQ=55.62;MQ0=3;MQRankSum=2.501;QD=42.80;ReadPosRankSum=-2.242;VQSLOD=1.1547;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,152,11233	1/1:0,11:11:18.06:987,18,0	0/0:19,0:12:35.71:0,36,1546	0/0:28,0:18:52.42:0,52,1931	0/0:25,0:25:75.24:0,75,4820	0/0:22,0:22:45.15:0,45,2438	0/0:28,0:28:48.12:0,48,2538	1/1:8,19:27:57.05:759,57,0	0/0:32,0:32:53.83:0,54,1730	0/0:36,0:35:99:0,102,4871	0/0:21,0:21:10.75:0,11,462	0/0:35,0:35:81.23:0,81,5027	0/0:34,0:34:99:0,102,7837	0/0:21,0:21:60.68:0,61,4728	0/0:21,0:21:32.92:0,33,1530	0/0:23,0:23:51.18:0,51,2857	0/0:39,0:39:93.28:0,93,5102	0/0:26,0:26:75.23:0,75,4428	0/0:25,0:25:64.08:0,64,2495	0/0:17,0:17:33.11:0,33,1587	0/0:39,0:38:60.15:0,60,3051	0/0:18,0:18:35.48:0,35,2092	0/0:17,0:17:27.09:0,27,1891	0/0:33,0:33:63.21:0,63,3530	0/0:25,0:25:25.87:0,26,1156	0/0:33,0:33:96.33:0,96,6279	0/0:22,0:22:39.13:0,39,2023	0/0:8,0:8:15.05:0,15,717
chr10	57011967	.	ACCCACCC	A	24359.84	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=13.307;DP=435;FS=9.977;HRun=0;HaplotypeScore=131.8546;InbreedingCoeff=0.9898;MQ=68.76;MQ0=0;MQRankSum=-14.844;QD=77.09;ReadPosRankSum=2.521;VQSLOD=5.3802;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:84.27:0,84,3180	1/1:0,11:11:33.11:920,33,0	0/0:17,0:17:51.18:0,51,1869	0/0:10,0:10:27.98:0,28,1135	0/0:18,0:18:54.19:0,54,2225	1/1:0,16:16:48.16:1338,48,0	1/1:0,13:13:30.10:835,30,0	1/1:0,32:32:96.22:2436,96,0	1/1:0,19:18:54.19:1505,54,0	1/1:0,19:19:57.20:1591,57,0	1/1:0,11:11:24.08:669,24,0	1/1:0,14:14:42.14:1171,42,0	0/0:29,0:29:87.28:0,87,3441	0/0:16,0:16:48.15:0,48,1869	1/1:1,16:17:51.18:1410,51,0	1/1:0,14:14:39.13:1087,39,0	1/1:1,7:8:21.07:585,21,0	1/1:1,8:9:24.08:670,24,0	1/1:0,18:18:54.19:1500,54,0	1/1:2,8:10:27.09:719,27,0	1/1:1,6:7:21.06:515,21,0	1/1:1,16:17:42.14:1137,42,0	1/1:2,14:16:48.15:1242,48,0	1/1:0,7:7:15.05:418,15,0	1/1:0,8:8:21.07:585,21,0	1/1:3,16:19:57.18:1432,57,0	1/1:0,26:26:78.27:2175,78,0	1/1:0,5:5:15.05:419,15,0
chr10	57012016	.	A	AT	7137.07	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=5.208;DP=469;FS=17.055;HRun=7;HaplotypeScore=108.7264;InbreedingCoeff=0.9888;MQ=72.23;MQ0=1;MQRankSum=-7.297;QD=22.80;ReadPosRankSum=2.902;VQSLOD=3.5475;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:60.10:0,60,579	0/0:12,0:12:27.04:0,27,261	0/0:15,0:15:16.62:0,17,263	0/0:6,0:6:15.02:0,15,143	0/0:25,0:25:72.10:0,72,690	1/1:4,0:19:43.13:219,43,0	1/1:3,0:10:20.13:102,20,0	0/0:26,0:26:66.10:0,66,637	1/1:2,23:25:66.16:780,66,0	1/1:5,14:19:45.14:541,45,0	1/1:1,6:7:18.06:217,18,0	1/1:1,0:11:28.75:146,29,0	0/0:30,0:30:87.11:0,87,832	0/0:21,0:21:60.08:0,60,574	1/1:2,21:23:63.19:761,63,0	1/1:6,0:13:25.80:130,26,0	1/1:0,0:12:34.50:175,35,0	1/1:0,0:10:28.75:146,29,0	1/1:6,19:25:57.17:688,57,0	1/1:2,8:10:21.06:254,21,0	1/1:1,10:11:27.08:326,27,0	1/1:1,0:16:37.60:208,38,0	1/1:3,1:17:37.38:190,37,0	1/1:1,0:12:28.72:146,29,0	1/1:1,9:10:27.07:314,27,0	1/1:4,15:19:45.14:543,45,0	1/1:4,33:37:90.28:1087,90,0	1/1:1,5:6:14.99:164,15,0
chr10	57012339	.	ATTT	A	8952.35	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=6.835;DP=408;FS=21.685;HRun=12;HaplotypeScore=67.0187;InbreedingCoeff=0.9707;MQ=74.18;MQ0=0;MQRankSum=-5.261;QD=31.52;ReadPosRankSum=3.055;VQSLOD=2.3828;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:28:78.25:0,78,1487	1/1:1,10:11:30.10:379,30,0	0/0:16,0:16:29.55:0,30,407	0/0:12,0:10:9.67:0,10,160	0/0:30,0:33:84.25:0,84,1518	1/1:1,16:17:39.12:493,39,0	1/1:0,8:8:24.08:303,24,0	1/1:3,25:28:57.06:707,57,0	1/1:2,11:13:33.10:417,33,0	1/1:4,14:18:42.10:530,42,0	1/1:2,6:8:18.03:227,18,0	1/1:1,12:13:36.10:455,36,0	0/0:19,0:19:51.16:0,51,971	0/0:14,0:15:39.11:0,39,663	1/1:0,6:6:15.05:190,15,0	1/1:1,6:7:15.03:190,15,0	1/1:1,23:24:69.20:871,69,0	1/1:2,20:22:60.17:758,60,0	1/1:2,11:13:33.06:400,33,0	1/1:3,18:21:48.10:606,48,0	1/1:0,9:9:21.06:265,21,0	1/1:0,7:7:21.07:265,21,0	1/1:0,11:11:27.09:341,27,0	1/1:0,4:4:12.04:152,12,0	1/1:1,11:12:30.10:379,30,0	1/1:1,6:7:18.05:227,18,0	1/1:3,14:17:39.09:493,39,0	1/1:0,8:8:24.08:303,24,0
chr10	57012832	.	A	AACACACAC	6969.09	PASS	AC=40;AF=0.769;AN=52;BaseQRankSum=1.205;DP=536;FS=0.000;HRun=0;HaplotypeScore=152.5297;InbreedingCoeff=0.6870;MQ=57.07;MQ0=17;MQRankSum=-5.031;QD=18.05;ReadPosRankSum=-2.316;VQSLOD=3.8929;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:36:50.97:0,51,1052	0/0:2,0:5:2.81:0,3,16	./.	./.	0/0:13,0:15:27.56:0,28,634	1/1:24,1:24:24.07:531,24,0	1/1:15,1:20:5.90:147,6,0	0/0:18,0:16:3:0,3,30	1/1:6,3:20:12.04:392,12,0	1/1:25,0:24:35.24:728,35,0	1/1:9,0:8:5.96:84,6,0	1/1:12,4:21:12.04:372,12,0	0/0:5,0:7:9.03:0,9,168	0/0:18,0:17:27.09:0,27,570	1/1:12,1:17:14.26:401,14,0	1/1:13,5:19:12.04:460,12,0	1/1:20,5:30:14.95:491,15,0	1/1:9,0:12:6.02:85,6,0	1/1:14,0:16:9.50:236,10,0	1/1:10,0:17:12.04:381,12,0	1/1:31,4:37:6:131,6,0	1/1:6,6:15:9.03:366,9,0	1/1:6,0:10:3.01:50,3,0	1/1:9,0:22:2.26:193,2,0	1/1:7,1:10:6.02:186,6,0	1/1:24,0:23:29.89:604,30,0	1/1:13,6:22:27.09:910,27,0	1/1:7,0:7:9.03:218,9,0
chr10	57013606	.	G	GA	18603.04	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-4.798;DP=730;FS=1.431;HRun=4;HaplotypeScore=78.0275;InbreedingCoeff=1.0000;MQ=94.91;MQ0=0;MQRankSum=-6.191;QD=34.45;ReadPosRankSum=2.838;VQSLOD=5.4870;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,102,1156	1/1:0,21:21:57.18:780,57,0	0/0:38,0:38:84.23:0,84,1013	0/0:27,0:27:63.08:0,63,677	0/0:35,0:35:99:0,99,1113	1/1:0,28:28:69.23:944,69,0	1/1:3,21:24:60.20:821,60,0	1/1:2,35:37:99:1318,102,0	1/1:0,24:24:57.19:780,57,0	1/1:2,22:24:66.21:888,66,0	1/1:3,23:26:63.21:862,63,0	1/1:3,17:20:45.15:616,45,0	0/0:29,0:29:84.21:0,84,933	0/0:22,0:22:66.19:0,66,748	1/1:2,27:29:72.24:985,72,0	1/1:0,17:17:48.16:657,48,0	1/1:4,31:35:84.28:1149,84,0	1/1:0,25:25:63.21:862,63,0	1/1:0,21:21:63.21:861,63,0	1/1:4,21:25:60.08:758,60,0	1/1:2,21:23:54.18:739,54,0	1/1:1,18:19:48.16:657,48,0	1/1:1,16:17:37.78:530,38,0	1/1:1,34:35:81.27:1108,81,0	1/1:1,18:19:51.17:698,51,0	1/1:1,22:23:66.21:886,66,0	1/1:3,29:32:78.25:1052,78,0	1/1:0,16:16:48.16:656,48,0
chr10	57015908	.	TG	T	5364.12	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=9.359;DP=604;FS=15.843;HRun=9;HaplotypeScore=71.7623;InbreedingCoeff=0.9989;MQ=80.60;MQ0=0;MQRankSum=-1.688;QD=20.47;ReadPosRankSum=2.716;VQSLOD=4.1021;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:84.18:0,84,932	1/1:0,10:10:27.01:247,27,0	0/0:16,0:16:28.85:0,29,310	0/0:23,0:21:41.99:0,42,422	0/0:17,0:17:42.11:0,42,475	0/0:19,0:19:54.16:0,54,623	0/0:27,1:28:50.74:0,51,826	1/1:8,20:28:51:467,51,0	1/1:4,17:21:42.01:383,42,0	1/1:5,9:14:27.01:247,27,0	1/1:3,11:14:30.01:274,30,0	0/0:23,0:23:51.12:0,51,568	0/0:22,0:22:54.98:0,55,589	0/0:18,0:18:48.10:0,48,521	1/1:5,25:30:69.02:631,69,0	0/0:25,0:25:60.16:0,60,672	0/0:33,0:34:84.06:0,84,937	0/0:17,1:19:23.52:0,24,505	1/1:5,12:17:26.98:242,27,0	1/1:1,14:15:42.02:384,42,0	1/1:7,26:33:72.03:659,72,0	0/0:19,1:20:26.65:0,27,537	0/0:16,0:16:42.10:0,42,465	0/0:28,0:28:75.19:0,75,838	1/1:2,22:24:54.03:494,54,0	1/1:1,13:14:39.02:357,39,0	1/1:1,23:24:63.01:576,63,0	1/1:5,13:18:44.96:403,45,0
chr10	57017742	.	CATGG	C	188.64	PASS	AC=4;AF=0.077;AN=52;BaseQRankSum=0.832;DP=435;FS=10.191;HRun=0;HaplotypeScore=64.2596;InbreedingCoeff=0.8086;MQ=38.49;MQ0=87;MQRankSum=-2.855;QD=20.96;ReadPosRankSum=-1.861;VQSLOD=1.9635;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:21:48.09:0,48,1069	1/1:0,1:1:3.01:54,3,0	./.	./.	0/0:4,0:4:9.03:0,9,235	0/0:15,0:8:24.08:0,24,627	0/0:24,0:20:42.13:0,42,1038	1/1:3,5:8:15.01:238,15,0	0/0:19,0:15:33.11:0,33,821	0/0:11,0:8:18.06:0,18,451	0/0:10,0:9:12.04:0,12,286	0/0:23,0:18:44.96:0,45,1014	0/0:13,0:13:36.12:0,36,940	0/0:15,0:14:27.08:0,27,651	0/0:14,0:8:21.07:0,21,549	0/0:18,0:18:48.12:0,48,1190	0/0:26,0:18:39.13:0,39,974	0/0:19,0:17:36.08:0,36,839	0/0:9,0:6:18.06:0,18,428	0/0:14,0:14:36.08:0,36,817	0/0:40,0:31:54.13:0,54,1266	0/0:13,0:12:24.08:0,24,586	0/0:9,0:9:12.04:0,12,281	0/0:25,0:21:51.17:0,51,1251	0/0:9,0:9:15.48:0,15,258	0/0:14,0:11:27.09:0,27,678	0/0:20,0:16:18.06:0,18,423	0/0:10,0:10:18.06:0,18,447
chr10	57017843	.	G	GA	927.57	PASS	AB=0.841;AC=8;AF=0.143;AN=56;BaseQRankSum=9.297;DP=527;FS=7.907;HRun=8;HaplotypeScore=85.3878;InbreedingCoeff=-0.1785;MQ=56.26;MQ0=59;MQRankSum=-7.353;QD=4.20;ReadPosRankSum=-0.374;VQSLOD=-0.0110;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,1:29:69.03:0,69,631	0/0:3,0:3:9:0,9,81	0/0:23,0:9:5.59:0,6,54	0/1:16,2:9:45.28:45,0,74	0/0:11,0:9:20.99:0,21,187	0/1:17,4:20:99:99,0,110	0/1:22,7:26:99:150,0,232	0/0:12,0:11:30.01:0,30,274	0/0:8,0:8:17.99:0,18,160	0/0:16,0:13:30.01:0,30,274	0/0:9,0:9:11.99:0,12,109	0/1:13,4:14:30.89:160,0,31	0/0:15,0:14:26.99:0,27,242	0/0:11,0:11:18.01:0,18,165	0/0:12,0:10:20.99:0,21,187	0/1:18,9:26:99:358,0,114	0/1:44,6:45:99:126,0,631	0/1:31,3:33:90.65:91,0,402	0/0:10,0:9:18.44:0,18,158	0/0:17,0:15:29.82:0,30,252	0/0:23,0:21:35.99:0,36,329	0/1:17,4:17:32.94:33,0,219	0/0:16,1:16:31.78:0,32,299	0/0:28,0:23:39.84:0,40,433	0/0:22,0:18:41.95:0,42,370	0/0:10,0:10:24.01:0,24,219	0/0:17,0:17:38.92:0,39,337	0/0:10,0:10:14.98:0,15,137
chr10	57017852	.	G	GA	579.94	PASS	AB=0.857;AC=7;AF=0.125;AN=56;BaseQRankSum=8.520;DP=537;FS=0.611;HRun=10;HaplotypeScore=81.8212;InbreedingCoeff=-0.1573;MQ=59.98;MQ0=37;MQRankSum=-6.945;QD=3.02;ReadPosRankSum=2.326;VQSLOD=-0.6199;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:31:76.94:0,77,621	0/0:4,0:4:5.98:0,6,49	0/0:25,0:11:19.86:0,20,129	0/1:16,0:11:29.45:29,0,49	0/0:13,0:13:35.94:0,36,294	0/1:14,4:16:33.10:33,0,166	0/1:19,7:24:99:165,0,217	0/0:14,0:14:41.91:0,42,337	0/0:11,0:11:32.94:0,33,269	0/0:15,0:14:38.95:0,39,318	0/0:12,0:12:23.94:0,24,194	0/1:12,4:13:99:129,0,110	0/0:13,0:12:32.95:0,33,269	0/0:12,0:12:32.93:0,33,264	0/0:12,0:12:29.86:0,30,236	0/1:18,10:27:99:241,0,165	0/1:45,5:45:74.07:74,0,585	0/1:36,2:36:38.09:38,0,377	0/0:10,0:9:23.90:0,24,197	0/0:19,0:16:35.86:0,36,288	0/0:22,1:22:47.89:0,48,389	0/0:17,1:17:3.79:0,4,237	0/0:15,1:15:10.22:0,10,288	0/0:24,1:21:21.13:0,21,369	0/0:26,0:21:53.64:0,54,424	0/0:11,0:11:29.92:0,30,240	0/0:19,0:18:50.67:0,51,405	0/0:14,0:14:38.52:0,39,302
chr10	57019001	.	GGAGAAGAGAAGAGAA	G	854.56	PASS	AB=0.985;AC=22;AF=0.550;AN=40;BaseQRankSum=0.890;DP=532;FS=0.000;HRun=0;HaplotypeScore=199.8718;InbreedingCoeff=0.5125;MQ=88.34;MQ0=6;MQRankSum=-1.023;QD=4.11;ReadPosRankSum=2.380;VQSLOD=2.7149;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:32:36.12:0,36,2098	./.	./.	./.	0/0:18,0:20:14.54:0,15,273	0/1:16,0:16:0:0,0,0	./.	0/0:25,0:25:0:0,0,0	1/1:16,0:16:3.01:66,3,0	1/1:26,0:25:6.01:135,6,0	1/1:8,4:12:2.86:20,3,0	./.	0/0:26,0:26:12.04:0,12,706	0/0:10,0:10:15.01:0,15,825	1/1:14,8:22:6.02:181,6,0	1/1:11,0:17:3.01:41,3,0	./.	0/0:16,0:16:2.60:0,3,10	./.	1/1:17,0:17:6.01:116,6,0	1/1:8,0:8:3:26,3,0	0/1:15,0:16:0:0,0,0	0/1:11,0:11:0.02:0,0,0	0/1:17,0:17:0.37:63,0,0	0/0:14,0:25:13.08:0,13,141	./.	1/1:10,8:18:3.01:90,3,0	1/1:7,4:10:6.02:244,6,0
chr10	57019279	.	TTA	T	6484.54	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=11.882;DP=670;FS=5.937;HRun=0;HaplotypeScore=81.9805;InbreedingCoeff=0.9957;MQ=88.71;MQ0=0;MQRankSum=0.747;QD=32.75;ReadPosRankSum=3.093;VQSLOD=7.2147;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,120,2222	0/0:10,0:10:30.10:0,30,579	0/0:22,0:22:66.17:0,66,1220	0/0:29,0:29:74.41:0,74,1415	0/0:25,0:25:69.22:0,69,1296	1/1:5,21:26:69.22:1030,69,0	1/1:1,19:20:42.14:643,42,0	0/0:30,0:30:87.29:0,87,1631	0/0:27,0:27:75.23:0,75,1377	0/0:34,0:34:93.17:0,93,1683	0/0:27,0:27:81.23:0,81,1492	1/1:0,19:19:54.18:826,54,0	0/0:27,0:27:81.25:0,81,1497	0/0:20,0:20:60.17:0,60,1061	0/0:30,0:30:90.31:0,90,1703	1/1:1,27:28:14.31:998,14,0	1/1:0,21:21:42.14:642,42,0	1/1:1,13:14:22.31:364,22,0	0/0:14,0:14:42.12:0,42,717	0/0:29,0:29:87.27:0,87,1598	0/0:23,0:23:66.23:0,66,1274	1/1:9,10:19:20.75:321,21,0	1/1:14,15:29:57.12:789,57,0	1/1:1,21:22:57.19:872,57,0	0/0:25,0:25:75.24:0,75,1408	0/0:26,0:26:75.24:0,75,1385	0/0:25,0:25:72.23:0,72,1350	0/0:9,0:9:27.09:0,27,521
chr10	57019411	.	C	CTGTGTG	12307.17	PASS	AB=1.000;AC=30;AF=0.536;AN=56;BaseQRankSum=-7.629;DP=905;FS=5.805;HRun=0;HaplotypeScore=225.5795;InbreedingCoeff=0.6782;MQ=58.90;MQ0=16;MQRankSum=-6.450;QD=23.85;ReadPosRankSum=-4.441;VQSLOD=3.4720;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,114,2213	1/1:8,0:8:8.37:171,8,0	0/0:68,0:33:35.30:0,35,511	0/0:59,0:31:40.04:0,40,519	0/0:27,0:27:60.15:0,60,979	0/0:15,0:14:24.06:0,24,223	0/0:30,0:30:2.18:0,2,392	1/1:46,0:46:47.20:712,47,0	1/1:13,20:41:43.33:1004,43,0	1/1:19,19:40:90.08:2040,90,0	1/1:3,9:14:18.06:352,18,0	0/1:26,0:26:12.09:12,0,523	0/0:31,0:31:75.13:0,75,1396	0/0:23,0:23:63.16:0,63,1138	1/1:7,27:39:48.16:1457,48,0	0/0:23,0:23:27.37:0,27,517	0/0:29,0:29:29.77:0,30,696	0/1:20,0:20:19.86:20,0,246	1/1:5,14:19:45.03:963,45,0	1/1:13,20:34:51.08:1125,51,0	1/1:31,0:57:53.33:929,53,0	0/0:31,0:31:67.03:0,67,736	0/1:19,0:19:13.17:13,0,217	0/1:47,0:47:12.63:13,0,916	1/1:5,13:20:8.95:240,9,0	1/1:18,16:36:67.78:1600,68,0	1/1:6,20:26:38.76:1039,39,0	1/1:5,13:19:20.04:617,20,0
chr10	57019427	.	TTG	T	2048.46	PASS	AB=0.993;AC=17;AF=0.304;AN=56;BaseQRankSum=0.140;DP=905;FS=0.775;HRun=0;HaplotypeScore=190.4859;InbreedingCoeff=0.7408;MQ=57.01;MQ0=26;MQRankSum=8.296;QD=6.72;ReadPosRankSum=1.817;VQSLOD=3.4429;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,117,1750	0/0:10,0:10:9.93:0,10,38	0/0:69,1:23:11.91:0,12,159	0/0:60,0:25:16.59:0,17,123	0/0:28,0:28:48.11:0,48,706	0/1:12,0:11:3.94:33,0,4	1/1:25,1:26:4.47:227,4,0	0/1:48,1:49:99:301,0,298	0/0:39,0:39:45.83:0,46,788	0/0:38,0:38:50.61:0,51,892	0/0:15,0:15:20.62:0,21,246	1/1:27,3:30:27.56:302,28,0	0/0:30,0:30:69.14:0,69,1035	0/0:29,0:28:60.17:0,60,918	0/0:39,0:39:68.03:0,68,944	1/1:27,0:27:41.94:300,42,0	1/1:34,1:35:25.60:303,26,0	0/1:21,0:21:9.50:100,0,9	0/0:22,0:20:41.71:0,42,553	0/0:24,0:24:44.86:0,45,545	0/0:55,0:53:30.95:0,31,639	1/1:31,2:33:38.15:259,38,0	1/1:21,0:21:15.41:115,15,0	1/1:51,0:51:49.04:306,49,0	0/0:18,0:18:24.04:0,24,320	0/0:27,0:26:47.29:0,47,725	0/0:24,0:23:30.92:0,31,468	0/0:18,0:16:26.99:0,27,348
chr10	57019429	.	G	GTGTGTGTGTT	2760.55	PASS	AB=0.985;AC=21;AF=0.375;AN=56;BaseQRankSum=4.099;DP=902;FS=22.040;HRun=0;HaplotypeScore=300.2057;InbreedingCoeff=-0.3350;MQ=55.63;MQ0=27;MQRankSum=-6.119;QD=4.78;ReadPosRankSum=-3.134;VQSLOD=0.8714;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:53:99:0,121,3048	1/1:3,8:11:11.63:343,12,0	0/0:74,0:28:32.09:0,32,308	0/0:58,0:23:18.93:0,19,180	0/0:28,0:28:45.27:0,45,1160	0/0:12,0:11:13.96:0,14,302	0/1:27,0:27:99:153,0,568	1/1:47,0:47:82.14:1005,82,0	0/1:39,0:39:76.04:76,0,487	0/1:36,0:36:72.61:73,0,673	0/1:14,0:15:32.34:32,0,181	0/1:30,0:30:99:121,0,713	0/0:31,0:31:75.18:0,75,1883	0/0:28,0:28:69.04:0,69,1607	0/1:36,0:36:99:126,0,416	0/1:26,0:26:99:141,0,606	0/1:36,0:36:99:116,0,827	0/1:23,0:23:43.15:43,0,331	0/0:21,0:19:4.51:0,5,327	0/1:23,0:23:99:100,0,250	0/1:52,0:51:68.86:69,0,643	0/1:31,0:31:55.89:56,0,874	0/1:22,0:22:41.65:42,0,362	0/1:51,0:51:99:199,0,1256	0/0:17,0:17:2.99:0,3,269	0/1:26,0:26:63.82:64,0,417	0/1:20,0:22:99:146,0,144	0/1:20,0:18:24.05:24,0,114
chr10	57020693	.	C	CT	2093.25	PASS	AB=0.810;AC=19;AF=0.339;AN=56;BaseQRankSum=-4.922;DP=566;FS=8.782;HRun=13;HaplotypeScore=85.2811;InbreedingCoeff=0.2173;MQ=58.13;MQ0=7;MQRankSum=2.174;QD=7.87;ReadPosRankSum=1.034;VQSLOD=2.3358;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,1:30:52.81:0,53,344	0/0:5,0:12:12.04:0,12,36	0/0:18,0:7:14.69:0,15,87	0/0:20,0:7:4.13:0,4,35	0/0:24,1:28:12.65:0,13,263	0/1:7,5:12:14.22:154,0,14	1/1:7,14:20:15.46:286,15,0	0/0:11,0:25:25.83:0,26,75	0/0:17,1:18:7.83:0,8,198	0/0:23,3:28:14.30:0,14,229	0/1:14,1:14:2.75:3,0,122	1/1:3,9:11:0.45:147,0,0	0/0:17,0:17:9.50:0,9,149	0/1:13,0:12:1.51:2,0,85	0/0:18,1:19:16.74:0,17,259	1/1:6,7:13:27.03:251,27,0	0/1:5,17:22:37.65:244,0,38	1/1:10,20:30:10.05:373,10,0	0/0:17,1:18:12.81:0,13,222	0/1:23,1:25:30.25:30,0,218	0/1:9,2:12:5.04:5,0,106	0/1:7,10:18:35.01:165,0,35	0/1:17,10:28:49.09:278,0,49	1/1:2,18:21:35.88:321,36,0	0/0:11,3:15:0.55:0,1,132	0/0:31,0:33:58.43:0,58,422	0/1:18,2:23:4.99:5,0,231	0/0:12,2:14:6.93:0,7,184
chr10	57020847	.	GT	G	12782.97	PASS	AC=52;AF=0.963;AN=54;BaseQRankSum=-0.003;DP=494;FS=7.246;HRun=3;HaplotypeScore=114.0077;InbreedingCoeff=0.6940;MQ=34.03;MQ0=1;MQRankSum=-2.394;QD=26.36;ReadPosRankSum=1.835;VQSLOD=3.6931;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,44:46:93.23:1116,93,0	1/1:0,8:8:21.02:242,21,0	0/0:5,0:3:6.02:0,6,65	./.	1/1:0,22:22:42.13:517,42,0	1/1:0,26:26:72.06:821,72,0	1/1:1,11:8:18.06:221,18,0	1/1:2,13:13:30.05:354,30,0	1/1:0,19:19:48.15:593,48,0	1/1:2,25:27:68.88:835,69,0	1/1:0,13:13:12.03:148,12,0	1/1:1,15:16:42.13:519,42,0	1/1:0,18:18:39.12:479,39,0	1/1:1,23:21:54.13:650,54,0	1/1:0,23:23:66.17:799,66,0	1/1:1,17:18:39.11:471,39,0	1/1:3,21:24:39.08:465,39,0	1/1:0,13:13:24.07:297,24,0	1/1:2,8:9:24.03:280,24,0	1/1:1,18:19:35.94:444,36,0	1/1:4,8:10:15.05:185,15,0	1/1:1,25:26:69.22:852,69,0	1/1:2,14:16:39.12:476,39,0	1/1:2,13:14:21.07:259,21,0	1/1:0,13:13:35.94:390,36,0	1/1:4,21:25:57.18:703,57,0	1/1:4,19:23:51.16:630,51,0	1/1:0,2:2:3.01:37,3,0
chr10	57022059	.	AACAGACACAC	A	563.32	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=-1.667;DP=395;FS=6.529;HRun=0;HaplotypeScore=131.0510;InbreedingCoeff=0.1495;MQ=77.54;MQ0=11;MQRankSum=-2.056;QD=8.05;ReadPosRankSum=-1.917;VQSLOD=1.3402;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:41.79:0,42,502	0/0:0,10:9:2.88:0,3,15	0/0:33,0:24:62.81:0,63,540	0/0:33,0:25:49.68:0,50,436	0/0:9,0:9:18:0,18,281	0/1:16,0:16:99:103,0,113	0/0:21,0:21:31.66:0,32,240	1/1:19,0:19:48.37:413,48,0	0/0:10,0:10:11.75:0,12,101	0/0:14,0:14:7.44:0,7,357	0/0:9,0:9:11.65:0,12,82	0/1:7,0:7:30.96:55,0,31	0/0:8,0:8:18.06:0,18,473	0/0:10,0:10:27.06:0,27,867	0/0:11,0:10:23.90:0,24,352	0/1:11,0:11:39.16:39,0,106	0/0:15,0:15:17.93:0,18,142	0/1:10,0:10:78.33:78,0,181	0/1:7,0:6:8.56:9,0,70	0/0:7,0:7:18.01:0,18,194	0/0:29,0:27:38.57:0,39,429	0/0:16,0:15:17.56:0,18,146	0/0:15,0:14:17.98:0,18,149	0/0:18,0:17:20.94:0,21,167	0/0:10,0:10:26.84:0,27,322	0/0:12,0:12:29.36:0,29,333	0/0:10,0:10:29.68:0,30,251	0/0:6,0:5:14.97:0,15,207
chr10	57022063	.	GACACACACACAC	G	501.81	PASS	AB=0.777;AC=14;AF=0.304;AN=46;BaseQRankSum=0.841;DP=393;FS=2.351;HRun=0;HaplotypeScore=138.9314;InbreedingCoeff=0.4256;MQ=70.57;MQ0=18;MQRankSum=-1.727;QD=4.29;ReadPosRankSum=1.111;VQSLOD=2.4571;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:21:10.98:0,11,237	0/0:10,0:9:3.01:0,3,48	./.	./.	0/0:4,0:9:9.01:0,9,205	1/1:7,7:16:6.02:202,6,0	0/1:14,7:21:0.40:14,0,0	0/0:19,0:19:9.02:0,9,105	0/0:3,0:8:5.85:0,6,69	0/1:7,0:14:13.56:14,0,259	./.	1/1:2,1:6:3.01:101,3,0	0/0:8,0:8:18.53:0,19,473	0/0:11,0:11:21.07:0,21,820	0/0:10,0:9:14.86:0,15,278	1/1:6,4:11:3.01:93,3,0	./.	0/1:10,0:10:63.55:155,0,64	1/1:6,0:5:2.99:24,3,0	0/0:7,0:7:6.02:0,6,95	0/0:29,0:27:8.24:0,8,196	0/1:10,7:15:0:0,0,0	1/1:8,1:13:5.79:37,6,0	./.	0/0:9,0:9:17.89:0,18,253	0/0:6,0:13:18.37:0,18,234	0/0:9,0:9:8.70:0,9,106	0/0:6,0:5:9.01:0,9,163
chr10	57022272	.	CT	C	9223.87	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=11.047;DP=624;FS=3.513;HRun=3;HaplotypeScore=66.9880;InbreedingCoeff=0.9992;MQ=76.70;MQ0=0;MQRankSum=-1.435;QD=34.16;ReadPosRankSum=2.275;VQSLOD=5.6295;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,111,1573	1/1:0,10:10:27.08:333,27,0	0/0:25,0:25:64.80:0,65,783	0/0:20,0:20:45.25:0,45,592	0/0:22,0:22:63.20:0,63,889	0/0:23,0:23:66.21:0,66,933	0/0:24,0:24:72.23:0,72,1017	1/1:2,26:28:78.23:954,78,0	1/1:0,25:25:69.20:854,69,0	1/1:0,22:22:63.18:766,63,0	1/1:0,10:10:27.08:334,27,0	0/0:21,0:21:57.18:0,57,802	0/0:21,0:21:60.19:0,60,844	0/0:24,0:24:72.23:0,72,1013	1/1:0,21:21:51.16:632,51,0	0/0:21,0:21:60.20:0,60,854	0/0:37,0:37:99:0,99,1357	0/0:16,0:16:48.16:0,48,691	1/1:1,14:15:45.12:537,45,0	1/1:0,17:17:48.15:591,48,0	1/1:0,43:43:99:1487,120,0	0/0:17,0:17:51.16:0,51,716	0/0:17,0:17:51.17:0,51,734	0/0:26,0:26:66.17:0,66,908	1/1:0,7:7:21.07:260,21,0	1/1:0,16:16:45.12:541,45,0	1/1:0,31:31:81.25:1004,81,0	1/1:0,25:25:75.24:929,75,0
chr10	57022656	.	CT	C	7110.82	PASS	AB=0.725;AC=32;AF=0.571;AN=56;BaseQRankSum=3.503;DP=574;FS=110.859;HRun=7;HaplotypeScore=75.3036;InbreedingCoeff=-0.0048;MQ=62.07;MQ0=0;MQRankSum=2.157;QD=15.39;ReadPosRankSum=0.301;VQSLOD=-0.2520;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:87.23:0,87,1066	0/1:9,9:18:99:158,0,111	0/0:14,0:11:12.12:0,12,199	0/1:12,0:12:4.83:5,0,130	0/0:32,0:32:72.21:0,72,949	1/1:0,22:22:57.13:582,57,0	1/1:1,11:12:33.08:337,33,0	0/1:14,8:23:99:179,0,221	0/1:10,3:13:61.89:62,0,107	0/1:16,16:31:99:395,0,168	0/1:10,13:23:45.56:332,0,46	1/1:0,23:23:54.12:551,54,0	0/0:17,0:17:51.16:0,51,630	0/0:17,0:17:51.16:0,51,641	0/1:11,9:20:99:191,0,150	1/1:2,19:21:51.11:520,51,0	1/1:3,27:30:66.14:673,66,0	1/1:1,18:19:48.11:490,48,0	0/1:9,7:15:43.67:154,0,44	0/1:12,10:22:99:201,0,177	0/1:4,6:10:22.71:132,0,23	1/1:1,18:20:48.03:468,48,0	1/1:1,28:29:72.04:734,72,0	1/1:1,13:14:33.07:337,33,0	0/1:18,13:31:99:270,0,235	0/1:15,10:25:99:179,0,213	0/1:14,7:21:99:127,0,198	0/1:4,2:6:36.23:36,0,49
chr10	57022810	.	GGAAA	G	5775.37	PASS	AB=0.708;AC=35;AF=0.625;AN=56;BaseQRankSum=6.727;DP=586;FS=1.567;HRun=0;HaplotypeScore=131.7795;InbreedingCoeff=0.5345;MQ=59.38;MQ0=4;MQRankSum=-1.216;QD=14.30;ReadPosRankSum=5.356;VQSLOD=4.5575;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:90.31:0,90,2025	0/0:7,0:7:9.03:0,9,135	0/0:16,0:8:1.25:0,1,3	0/0:11,0:8:2.50:0,2,9	0/0:33,1:34:18.59:0,19,1384	1/1:7,16:22:42.14:667,42,0	1/1:10,11:21:12.04:190,12,0	0/0:32,0:32:44.94:0,45,451	1/1:6,0:21:18.02:167,18,0	0/1:3,0:17:20.39:166,0,20	0/1:9,0:16:11.10:69,0,11	1/1:6,13:18:21.07:333,21,0	0/0:20,0:20:36.12:0,36,790	0/0:7,0:18:15.05:0,15,261	1/1:13,0:27:24.03:222,24,0	1/1:6,19:25:38.71:619,39,0	0/1:15,16:31:46.67:440,0,47	1/1:7,15:22:16.13:504,16,0	1/1:19,0:25:23.96:203,24,0	1/1:5,0:12:12.01:111,12,0	0/1:12,0:12:21.07:34,0,21	1/1:7,16:23:39.13:614,39,0	1/1:5,17:21:29.09:449,29,0	1/1:6,17:23:27.09:429,27,0	1/1:6,0:18:18.02:166,18,0	0/1:9,0:21:13.41:128,0,13	1/1:6,0:13:14.98:131,15,0	1/1:9,0:9:14.96:131,15,0
chr10	57023252	.	TACACACACACACACATAC	T	2611.44	PASS	AB=0.998;AC=30;AF=0.536;AN=56;BaseQRankSum=-4.559;DP=511;FS=51.137;HRun=0;HaplotypeScore=201.7589;InbreedingCoeff=0.0296;MQ=53.09;MQ0=21;MQRankSum=-1.181;QD=6.78;ReadPosRankSum=3.696;VQSLOD=0.8291;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:33:45.46:0,45,1114	1/1:5,0:4:8.93:66,9,0	0/1:23,0:16:8.85:9,0,56	0/1:20,0:13:6.50:7,0,25	0/0:29,0:28:54.01:0,54,2245	0/1:17,0:15:3.09:87,0,3	1/1:18,0:15:14.90:144,15,0	1/1:17,0:16:14.79:107,15,0	0/1:21,0:20:99:220,0,177	0/1:17,0:17:99:178,0,296	1/1:18,0:18:20.27:168,20,0	1/1:13,0:12:23.65:246,24,0	0/0:9,0:8:12.51:0,13,799	0/0:19,0:16:26.15:0,26,853	0/1:17,0:16:0:0,0,0	0/1:13,0:12:30.92:31,0,106	1/1:21,0:21:28.57:256,29,0	1/1:23,0:22:22.03:286,22,0	0/1:7,0:7:31.59:32,0,46	0/0:12,0:12:3.46:0,3,25	0/1:34,0:32:99:211,0,164	1/1:13,0:13:11.48:96,11,0	0/0:11,12:20:6.02:0,6,155	0/1:30,1:31:36.47:294,0,36	0/1:13,0:12:34.20:117,0,34	0/1:23,0:21:99:146,0,259	0/1:16,0:16:27.43:70,0,27	0/1:5,0:5:14.34:20,0,14
chr10	57023266	.	CAT	C	4616.93	PASS	AB=1.000;AC=44;AF=0.786;AN=56;BaseQRankSum=2.002;DP=498;FS=1.133;HRun=0;HaplotypeScore=80.5408;InbreedingCoeff=0.2879;MQ=48.47;MQ0=25;MQRankSum=0.370;QD=10.47;ReadPosRankSum=-0.572;VQSLOD=4.4618;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:37,0:35:23.17:23,0,291	1/1:7,0:6:13.95:95,14,0	0/1:10,0:7:8.85:9,0,56	0/1:7,0:4:6.97:7,0,24	0/0:27,0:26:43.91:0,44,556	1/1:17,0:15:20.89:169,21,0	1/1:20,0:17:29:203,29,0	0/1:14,0:13:42.15:75,0,42	1/1:23,0:21:44.42:344,44,0	1/1:21,0:21:59.81:495,60,0	1/1:18,0:18:29.18:219,29,0	1/1:14,0:13:26.32:194,26,0	0/0:11,0:10:10.18:0,10,129	0/1:22,0:19:20.91:21,0,202	1/1:3,13:15:2.94:18,3,0	1/1:10,0:9:10.38:89,10,0	1/1:25,0:25:55.14:393,55,0	1/1:23,0:22:31.51:293,32,0	0/1:9,0:8:14.27:87,0,14	1/1:12,0:12:2.91:17,3,0	1/1:37,0:35:62.51:485,63,0	1/1:12,0:11:20.52:169,21,0	0/0:19,0:16:2.34:0,2,18	1/1:39,0:39:47.33:353,47,0	1/1:12,0:11:23.81:186,24,0	1/1:18,0:16:47.64:371,48,0	1/1:12,0:12:28.70:209,29,0	1/1:4,0:4:11.96:93,12,0
chr10	57023268	.	T	TAC	495.99	PASS	AB=0.949;AC=30;AF=0.577;AN=52;BaseQRankSum=0.489;DP=503;FS=9.458;HRun=0;HaplotypeScore=103.0616;InbreedingCoeff=0.3177;MQ=48.37;MQ0=25;MQRankSum=-0.636;QD=1.49;ReadPosRankSum=-1.267;VQSLOD=1.1671;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:37:3.32:0,3,27	0/0:7,0:6:1.19:0,1,16	./.	./.	0/1:20,7:26:49.86:50,0,82	1/1:17,0:14:4.54:27,5,0	0/0:20,0:17:0.26:0,0,14	1/1:14,0:13:2.68:11,3,0	1/1:25,0:23:3.83:106,4,0	0/1:24,0:24:1.97:15,0,2	0/1:18,0:18:4.22:20,0,4	0/0:14,0:13:3.19:0,3,12	0/0:12,0:11:5.75:0,6,53	0/0:21,0:18:10.16:0,10,74	1/1:17,0:16:2.90:43,3,0	1/1:10,0:9:9.15:48,9,0	1/1:26,0:26:7.13:78,7,0	0/0:21,0:21:2.03:0,2,13	0/0:9,0:8:2.98:0,3,32	0/1:14,0:14:0:0,0,0	1/1:39,0:37:3.06:9,3,0	1/1:11,0:10:0.41:1,0,0	1/1:19,0:16:0.47:1,0,0	1/1:37,0:37:16.73:141,17,0	0/0:12,0:11:2.15:0,2,10	1/1:19,0:17:8.49:61,8,0	1/1:12,0:12:3.88:20,4,0	1/1:5,0:5:0.47:1,0,0
chr10	57025037	.	CATGT	C	3028.55	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=3.955;DP=584;FS=0.971;HRun=0;HaplotypeScore=115.2763;InbreedingCoeff=0.9310;MQ=68.26;MQ0=15;MQRankSum=0.721;QD=18.03;ReadPosRankSum=2.150;VQSLOD=3.5824;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:71.84:0,72,693	0/0:9,0:9:23.74:0,24,165	0/0:26,0:14:13:0,13,328	0/0:35,0:23:68.77:0,69,738	0/0:17,0:17:12.58:0,13,370	1/1:10,1:12:32.98:388,33,0	1/1:19,3:22:43.05:370,43,0	0/0:26,0:23:63.87:0,64,575	0/0:28,0:28:77.42:0,77,831	0/0:21,0:19:56.51:0,57,602	0/0:9,0:9:8.96:0,9,187	1/1:13,2:17:35.43:307,35,0	0/0:20,0:20:41.81:0,42,484	0/0:30,0:29:68.52:0,69,795	0/0:23,0:22:30:0,30,369	1/1:0,13:13:18.06:362,18,0	1/1:2,30:31:36.09:708,36,0	1/1:0,18:18:6.02:118,6,0	0/0:12,0:11:26.85:0,27,258	0/0:14,0:15:31.50:0,32,418	0/0:43,0:43:98.60:0,99,1170	1/1:0,1:11:3.01:62,3,0	1/1:1,12:12:11.81:240,12,0	1/1:2,26:29:35.58:678,36,0	0/0:18,0:18:41.91:0,42,601	0/0:18,0:19:53.91:0,54,635	0/0:23,0:23:49.65:0,50,575	0/0:14,0:14:38.95:0,39,481
chr10	57025038	.	A	ATG	1164.59	PASS	AB=0.908;AC=19;AF=0.380;AN=50;BaseQRankSum=-4.404;DP=600;FS=2.562;HRun=0;HaplotypeScore=114.0873;InbreedingCoeff=0.0849;MQ=65.86;MQ0=16;MQRankSum=-0.398;QD=3.56;ReadPosRankSum=-0.116;VQSLOD=2.1309;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:28:14.18:14,0,41	./.	./.	./.	0/0:16,0:16:12.03:0,12,124	1/1:12,0:12:10.82:89,11,0	1/1:22,0:23:5.65:32,6,0	0/0:26,0:23:0.47:0,0,1	1/1:26,3:29:2.06:176,2,0	0/1:19,2:19:23.03:79,0,23	0/0:9,0:9:6.02:0,6,65	0/0:17,0:17:4.63:0,5,19	0/0:20,0:20:9.02:0,9,96	0/0:29,0:28:17.86:0,18,173	0/1:19,4:23:22.84:79,0,23	0/0:13,0:13:16.88:0,17,81	0/1:33,0:31:2.18:2,0,110	0/0:19,0:18:5.68:0,6,28	1/1:15,0:14:3.01:44,3,0	0/1:14,1:15:4.99:72,0,5	0/1:44,3:46:56.70:170,0,57	0/0:12,0:12:2.84:0,3,14	0/0:13,0:12:9.64:0,10,45	0/0:32,0:30:27.77:0,28,133	0/1:15,4:22:34.06:141,0,34	0/1:21,0:21:21.25:75,0,21	0/1:17,6:23:20.36:121,0,20	1/1:8,6:14:15.05:222,15,0
chr10	57025348	.	CT	C	3652.46	PASS	AB=1.000;AC=55;AF=0.982;AN=56;BaseQRankSum=2.389;DP=291;FS=0.000;HRun=1;HaplotypeScore=220.7443;InbreedingCoeff=-0.0337;MQ=26.47;MQ0=3;MQRankSum=-2.404;QD=12.55;ReadPosRankSum=2.419;VQSLOD=2.6223;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,21:19:35.89:282,36,0	1/1:2,6:7:11.96:93,12,0	1/1:5,0:2:5.93:40,6,0	0/1:9,0:3:15.67:16,0,37	1/1:2,19:16:17.84:135,18,0	1/1:2,8:9:20.93:162,21,0	1/1:1,8:9:14.96:119,15,0	1/1:1,12:11:28.42:201,28,0	1/1:0,12:11:23.94:189,24,0	1/1:2,13:14:29.71:205,30,0	1/1:0,8:8:5.99:50,6,0	1/1:1,9:9:23.95:195,24,0	1/1:0,9:9:11.97:96,12,0	1/1:0,15:15:23.95:195,24,0	1/1:0,13:12:17.96:143,18,0	1/1:0,12:11:32.89:256,33,0	1/1:0,2:2:5.98:46,6,0	1/1:1,4:5:11.94:89,12,0	1/1:0,9:4:11.90:84,12,0	1/1:0,14:14:23.93:187,24,0	1/1:0,7:7:2.99:24,3,0	1/1:1,9:7:8.98:73,9,0	1/1:0,8:7:11.98:98,12,0	1/1:0,5:5:5.95:47,6,0	1/1:0,8:8:8.98:72,9,0	1/1:0,20:18:47.60:334,48,0	1/1:0,10:9:20.90:157,21,0	1/1:0,3:3:8.95:66,9,0
chr10	57025382	.	CA	C	5307.01	PASS	AB=0.571;AC=51;AF=0.981;AN=52;BaseQRankSum=1.717;DP=304;FS=0.000;HRun=1;HaplotypeScore=300.6795;InbreedingCoeff=-0.0243;MQ=27.89;MQ0=0;MQRankSum=1.228;QD=17.46;ReadPosRankSum=1.686;VQSLOD=4.0888;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,27:25:47.90:396,48,0	1/1:1,5:6:17.91:137,18,0	./.	./.	1/1:0,16:15:23.76:198,24,0	1/1:0,6:6:17.96:144,18,0	1/1:0,14:14:38.91:310,39,0	1/1:0,11:7:19.91:135,20,0	1/1:1,12:13:32.92:262,33,0	1/1:1,11:12:32.75:234,33,0	1/1:1,12:13:17.98:155,18,0	1/1:0,10:10:26.93:213,27,0	1/1:1,11:12:32.94:267,33,0	1/1:2,16:18:41.93:342,42,0	1/1:0,16:15:38.93:319,39,0	1/1:0,10:10:29.93:238,30,0	1/1:0,5:5:11.97:96,12,0	1/1:0,6:6:17.92:136,18,0	0/1:2,6:7:3.57:91,0,4	1/1:0,12:12:29.91:235,30,0	1/1:0,12:12:23.94:191,24,0	1/1:1,8:8:11.98:98,12,0	1/1:0,13:12:14.98:123,15,0	1/1:1,5:6:3:25,3,0	1/1:0,12:12:26.94:217,27,0	1/1:1,20:19:53.70:399,54,0	1/1:2,11:13:35.88:280,36,0	1/1:0,3:3:8.95:67,9,0
chr10	57026132	.	C	CA	5034.68	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-7.056;DP=597;FS=4.309;HRun=9;HaplotypeScore=74.1814;InbreedingCoeff=0.9840;MQ=62.38;MQ0=4;MQRankSum=0.133;QD=21.70;ReadPosRankSum=-0.067;VQSLOD=5.4974;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:65.95:0,66,567	1/1:1,8:10:26.90:278,27,0	0/0:27,0:13:22.13:0,22,228	0/0:22,0:14:11.73:0,12,114	0/0:28,0:28:34.32:0,34,493	1/1:2,16:18:45.12:498,45,0	1/1:7,17:26:21.37:420,21,0	1/1:9,23:32:66.57:698,67,0	0/0:16,0:16:41.98:0,42,365	0/0:27,0:26:62.98:0,63,545	0/0:24,1:25:29.80:0,30,488	1/1:2,8:12:20.72:194,21,0	0/0:10,0:10:23.99:0,24,208	0/0:17,0:17:47.94:0,48,408	0/0:27,0:27:62.95:0,63,547	1/1:2,11:13:30.08:332,30,0	1/1:3,34:37:81.22:896,81,0	1/1:6,14:20:33.05:352,33,0	0/0:16,0:13:35.99:0,36,312	0/0:33,0:32:83.97:0,84,729	0/0:12,0:12:32.98:0,33,286	1/1:6,18:24:22.07:472,22,0	1/1:5,17:22:48.13:531,48,0	1/1:5,13:18:33.09:365,33,0	0/0:15,0:15:29.98:0,30,260	0/0:25,0:25:50.97:0,51,443	0/0:36,0:36:77.96:0,78,677	0/0:3,0:3:9:0,9,78
chr10	57028872	.	G	GT	11433.53	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=18.274;DP=663;FS=7.184;HRun=0;HaplotypeScore=106.8357;InbreedingCoeff=0.9988;MQ=68.12;MQ0=0;MQRankSum=-3.556;QD=42.19;ReadPosRankSum=2.635;VQSLOD=4.7296;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,135,1812	1/1:0,7:7:17.99:258,18,0	0/0:27,0:27:78.22:0,78,1024	0/0:30,0:30:77.70:0,78,964	0/0:25,0:25:75.24:0,75,1027	0/0:21,0:21:60.20:0,60,835	0/0:31,0:31:87.72:0,88,1168	1/1:3,18:21:60.19:918,60,0	1/1:0,28:28:75.12:1137,75,0	1/1:1,12:13:36.12:573,36,0	1/1:1,16:17:48.13:736,48,0	0/0:26,0:26:78.26:0,78,1090	0/0:24,0:24:72.24:0,72,1003	0/0:19,0:19:57.19:0,57,795	1/1:2,27:30:78.20:1196,78,0	0/0:28,0:28:84.27:0,84,1158	0/0:24,0:24:72.23:0,72,991	0/0:19,0:19:57.18:0,57,780	1/1:4,17:21:60.19:919,60,0	1/1:3,20:23:63.14:948,63,0	1/1:1,35:36:84.29:1337,84,0	0/0:24,0:24:66.21:0,66,901	0/0:16,0:16:48.16:0,48,667	0/0:32,0:32:96.31:0,96,1327	1/1:0,12:12:33.11:527,33,0	1/1:1,29:30:87.30:1382,87,0	1/1:0,21:21:63.21:1006,63,0	1/1:0,12:12:33.06:497,33,0
chr10	57029578	.	TTGTGTGTG	T	3913.21	PASS	AB=0.946;AC=14;AF=0.259;AN=54;BaseQRankSum=2.974;DP=599;FS=35.387;HRun=0;HaplotypeScore=172.7123;InbreedingCoeff=0.7294;MQ=67.08;MQ0=8;MQRankSum=-0.301;QD=22.23;ReadPosRankSum=0.599;VQSLOD=1.0874;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:32:78.25:0,78,2710	0/0:8,0:8:18.06:0,18,601	0/0:30,0:22:8.29:0,8,935	0/0:26,0:21:26.78:0,27,516	0/0:30,0:30:60.16:0,60,1842	0/0:21,0:20:33.10:0,33,974	0/0:20,0:17:18.01:0,18,524	0/0:32,0:32:63.21:0,63,1899	1/1:20,1:21:20.55:748,21,0	1/1:16,1:16:26.54:405,27,0	0/0:6,10:16:0.47:0,0,1	0/0:19,0:19:17.81:0,18,486	0/0:22,0:22:48.14:0,48,1657	0/0:19,0:19:42.62:0,43,1337	0/0:22,2:24:1.41:0,1,3	0/0:21,0:21:24.08:0,24,750	0/0:19,0:18:27.09:0,27,766	0/0:14,0:14:24.08:0,24,582	0/1:19,1:16:69.04:234,0,69	1/1:19,7:26:17.66:248,18,0	./.	0/0:23,0:23:37.07:0,37,1254	0/0:21,0:20:39.12:0,39,1209	0/0:11,0:11:18.06:0,18,612	1/1:14,3:16:18.06:388,18,0	1/1:7,20:26:20.54:1137,21,0	0/1:29,2:31:31:636,0,31	1/1:5,11:16:8.97:118,9,0
chr10	57029591	.	T	TGAGAGAGAGAGA	2976.13	PASS	AB=0.869;AC=19;AF=0.352;AN=54;BaseQRankSum=5.637;DP=552;FS=17.190;HRun=0;HaplotypeScore=193.6108;InbreedingCoeff=0.6349;MQ=57.18;MQ0=17;MQRankSum=-2.670;QD=15.50;ReadPosRankSum=-2.123;VQSLOD=0.9083;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,102,3440	0/0:7,0:6:18.04:0,18,488	0/0:36,0:17:11.30:0,11,986	0/0:40,0:14:26.53:0,27,513	0/0:27,0:27:66.18:0,66,2105	0/0:17,0:16:33.10:0,33,972	0/0:17,0:12:14.92:0,15,577	0/0:28,0:28:56.63:0,57,1991	1/1:21,0:21:8.10:539,8,0	1/1:17,0:14:19.20:462,19,0	./.	0/0:18,0:18:17.44:0,17,499	0/0:19,0:19:52.99:0,53,1862	0/0:17,0:17:48.14:0,48,1546	0/1:7,9:18:0:0,0,0	0/0:18,0:18:24.06:0,24,734	0/0:21,0:20:20.09:0,20,824	0/1:14,0:14:99:125,0,511	0/1:15,0:10:86.51:159,0,87	1/1:21,0:20:2.95:113,3,0	1/1:11,0:11:3.01:60,3,0	0/0:18,0:18:36.12:0,36,1271	0/0:17,0:16:39.12:0,39,1306	0/0:10,0:10:18.06:0,18,633	1/1:13,0:12:2.19:131,2,0	1/1:24,0:22:36.80:810,37,0	1/1:20,0:24:3.39:693,3,0	1/1:12,0:12:3.78:57,4,0
chr10	57029599	.	T	TGAGAGAGAGAGAGAGA	6718.22	PASS	AB=1.000;AC=43;AF=0.768;AN=56;BaseQRankSum=3.008;DP=627;FS=41.820;HRun=0;HaplotypeScore=234.2675;InbreedingCoeff=0.6803;MQ=49.54;MQ0=21;MQRankSum=-5.052;QD=15.92;ReadPosRankSum=-1.211;VQSLOD=2.5761;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:45.09:0,45,1941	1/1:6,0:6:9.03:236,9,0	0/0:40,0:13:8.77:0,9,203	0/0:57,0:13:4.99:0,5,177	0/0:25,0:26:30.10:0,30,1011	1/1:16,0:15:12.03:426,12,0	1/1:17,0:12:0.15:1,0,0	1/1:37,0:36:22.01:843,22,0	1/1:24,0:24:18.52:534,19,0	1/1:16,0:13:25.94:619,26,0	1/1:14,0:14:0.47:1,0,0	1/1:10,8:20:3.20:77,3,0	0/0:20,0:20:23.90:0,24,932	0/0:18,0:18:24.07:0,24,782	1/1:18,0:16:3.01:128,3,0	1/1:13,0:22:5.58:225,6,0	1/1:14,9:26:10.58:409,11,0	1/1:10,2:15:15.05:758,15,0	1/1:16,0:11:17.24:219,17,0	0/1:14,0:13:0.21:0,0,0	1/1:17,0:16:5.04:32,5,0	1/1:20,0:20:0.26:0,0,0	1/1:19,0:18:9.03:158,9,0	1/1:20,0:20:15.99:415,16,0	1/1:15,0:14:2.96:19,3,0	1/1:29,0:27:22.88:647,23,0	1/1:26,0:26:43.12:883,43,0	1/1:14,0:13:4.83:85,5,0
chr10	57029984	.	TTGCTGCTGTTGCTGCTGCTGCTGCTGC	T	3573.03	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=2.360;DP=532;FS=6.095;HRun=0;HaplotypeScore=305.1007;InbreedingCoeff=0.8495;MQ=69.14;MQ0=3;MQRankSum=-1.760;QD=21.52;ReadPosRankSum=1.201;VQSLOD=1.3144;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:53.88:0,54,921	0/0:1,0:1:3:0,3,27	0/0:28,0:22:36.80:0,37,1162	0/0:23,0:20:38.26:0,38,823	0/0:6,0:6:8.97:0,9,70	1/1:15,0:14:11.59:93,12,0	1/1:27,0:27:23.99:278,24,0	0/0:25,0:22:48.08:0,48,777	0/0:32,0:32:87.21:0,87,6890	0/0:13,0:13:23.97:0,24,210	0/0:7,0:7:5.60:0,6,40	1/1:3,24:27:24.08:1697,24,0	0/0:21,0:21:57.16:0,57,4669	0/0:23,0:23:60.17:0,60,4481	0/0:24,0:24:72.09:0,72,5193	1/1:1,0:16:9.03:401,9,0	1/1:1,22:23:3.01:214,3,0	1/1:1,20:21:3.01:214,3,0	0/0:16,0:16:41.76:0,42,433	0/0:7,0:7:11.95:0,12,95	0/0:49,0:48:99:0,111,3475	1/1:11,0:11:17.93:141,18,0	1/1:7,0:7:8.86:63,9,0	1/1:17,2:19:12.46:473,12,0	0/0:8,0:8:11.89:0,12,89	0/0:19,0:19:36.02:0,36,444	0/0:20,0:20:54.10:0,54,3242	0/0:12,0:12:26.99:0,27,1784
chr10	57030192	.	AT	A	2428.59	PASS	AB=0.769;AC=39;AF=0.696;AN=56;BaseQRankSum=-1.962;DP=492;FS=8.607;HRun=16;HaplotypeScore=60.0800;InbreedingCoeff=0.2888;MQ=63.57;MQ0=17;MQRankSum=0.564;QD=6.07;ReadPosRankSum=4.121;VQSLOD=2.2078;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:27,3:31:20.65:21,0,274	0/0:2,0:8:20.16:0,20,115	0/0:24,0:14:5.27:0,5,24	0/0:7,0:4:2.97:0,3,20	0/1:7,3:11:15.24:15,0,88	1/1:8,8:15:20.23:120,20,0	0/1:12,10:25:34.97:124,0,35	0/0:24,0:36:58.72:0,59,304	1/1:8,6:15:13.53:161,14,0	0/1:9,2:14:9.34:50,0,9	1/1:7,10:19:29.33:157,29,0	1/1:9,5:14:4.26:82,4,0	0/1:12,1:13:14.21:14,0,91	0/0:13,1:14:20.71:0,21,146	1/1:4,12:15:31.35:185,31,0	1/1:5,7:13:9:153,9,0	1/1:10,17:30:21.42:227,21,0	1/1:11,10:19:21.73:128,22,0	1/1:10,3:14:24.16:126,24,0	1/1:2,6:10:1.46:87,1,0	1/1:10,8:19:25.21:147,25,0	1/1:5,10:19:25.40:126,25,0	1/1:5,9:16:3.04:124,3,0	1/1:6,11:16:31.41:185,31,0	0/1:4,2:7:5.09:42,0,5	1/1:7,10:20:7.86:140,8,0	0/1:9,11:21:18.92:118,0,19	1/1:3,5:7:11.75:72,12,0
chr10	57030758	.	A	AATTTATATATGTAT	913.25	PASS	AB=1.000;AC=11;AF=0.275;AN=40;BaseQRankSum=1.839;DP=140;FS=14.168;HRun=0;HaplotypeScore=61.3259;InbreedingCoeff=0.4710;MQ=87.83;MQ0=1;MQRankSum=-2.472;QD=19.85;ReadPosRankSum=0.803;VQSLOD=0.4645;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:2,0:2:6.02:0,6,162	./.	0/1:18,0:12:1.85:2,0,27	0/0:4,0:4:9.03:0,9,229	1/1:4,0:4:6.02:142,6,0	./.	0/0:36,0:36:21:0,21,272	0/0:2,0:2:3.01:0,3,105	0/0:1,0:1:3.01:0,3,117	./.	1/1:1,0:1:3.01:71,3,0	0/0:8,0:8:15.05:0,15,540	0/0:2,0:2:3.01:0,3,76	0/0:3,0:3:6.02:0,6,235	1/1:2,0:2:6.01:97,6,0	1/1:4,0:9:12.04:495,12,0	1/1:7,4:11:6.02:233,6,0	0/0:5,0:5:3.01:0,3,117	0/0:2,0:2:3.01:0,3,117	./.	./.	./.	./.	0/0:2,0:2:3.01:0,3,102	0/0:5,0:5:6.02:0,6,177	0/0:7,0:7:6.02:0,6,235	0/0:7,0:7:18.06:0,18,512
chr10	57030791	.	ATG	A	61.31	PASS	AB=1.000;AC=7;AF=0.159;AN=44;BaseQRankSum=3.651;DP=120;FS=3.618;HRun=0;HaplotypeScore=28.7810;InbreedingCoeff=0.3250;MQ=108.93;MQ0=1;MQRankSum=-0.035;QD=1.98;ReadPosRankSum=-1.609;VQSLOD=1.0246;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:1,0:1:3.01:0,3,53	0/0:2,0:2:6.02:0,6,116	0/0:6,0:4:2.68:0,3,11	0/1:26,0:16:25.09:25,0,180	0/0:4,0:4:12.04:0,12,222	1/1:0,2:2:6.02:72,6,0	./.	0/0:27,0:27:75.18:0,75,1309	0/0:1,0:1:3.01:0,3,58	0/0:1,0:1:3.01:0,3,58	./.	1/1:0,1:1:3.01:37,3,0	0/0:5,0:5:15.05:0,15,290	0/0:1,0:1:3.01:0,3,58	0/0:2,0:2:6.02:0,6,116	1/1:1,1:2:3.01:37,3,0	0/0:9,0:9:15.05:0,15,284	0/0:10,0:9:21.07:0,21,377	0/0:4,0:4:12.04:0,12,232	0/0:1,0:1:3.01:0,3,58	./.	./.	./.	./.	0/0:2,0:2:6.02:0,6,116	0/0:2,0:2:6.02:0,6,116	0/0:3,0:3:9.03:0,9,174	0/0:8,0:8:24.08:0,24,463
chr10	57031299	.	CTGTGTGTGTG	C	3674.67	PASS	AB=0.905;AC=32;AF=0.615;AN=52;BaseQRankSum=6.481;DP=409;FS=1.523;HRun=0;HaplotypeScore=116.6475;InbreedingCoeff=0.4629;MQ=57.23;MQ0=9;MQRankSum=-2.628;QD=15.77;ReadPosRankSum=-1.001;VQSLOD=2.5128;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:31:66.56:0,67,2205	1/1:6,0:6:5.72:28,6,0	0/0:17,0:9:7.12:0,7,117	0/0:26,0:12:7.35:0,7,65	0/0:29,0:29:61.07:0,61,2112	0/1:12,0:12:0.27:0,0,19	./.	1/1:4,11:15:32.82:334,33,0	1/1:5,13:19:9.03:234,9,0	1/1:2,14:14:32.61:543,33,0	0/0:1,12:13:0.47:0,0,1	0/0:13,0:13:1.03:0,1,3	0/0:16,0:16:36.10:0,36,1197	0/0:11,0:11:27.08:0,27,960	0/1:5,8:13:39.60:246,0,40	1/1:16,0:16:6.37:136,6,0	0/1:15,0:14:28.47:59,0,28	0/1:19,0:19:42.44:120,0,42	1/1:6,0:6:2.02:92,2,0	1/1:4,7:10:6.02:142,6,0	1/1:12,0:12:12.02:160,12,0	./.	1/1:10,0:10:0.47:1,0,0	1/1:9,0:9:3.01:67,3,0	1/1:0,16:16:12.04:332,12,0	1/1:5,14:19:43.74:633,44,0	1/1:1,13:13:14.68:454,15,0	1/1:0,5:5:3.01:93,3,0
chr10	57031305	.	GTGTGTGTGTGTGTGTGTGTA	G	1759.94	PASS	AB=1.000;AC=23;AF=0.426;AN=54;BaseQRankSum=-0.388;DP=408;FS=8.286;HRun=0;HaplotypeScore=175.2311;InbreedingCoeff=0.5551;MQ=53.62;MQ0=11;MQRankSum=-2.520;QD=9.26;ReadPosRankSum=0.506;VQSLOD=2.1355;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:31:60.67:0,61,4240	0/0:6,0:6:6.02:0,6,237	1/1:14,0:6:1.55:4,2,0	0/1:25,0:10:13.36:21,0,13	0/0:26,0:26:60.18:0,60,3863	1/1:12,0:12:15:178,15,0	./.	1/1:14,0:14:8.99:76,9,0	0/0:19,0:19:9.02:0,9,165	0/0:16,0:14:7.58:0,8,594	0/0:12,0:12:0.47:0,0,1	1/1:11,0:11:8.96:117,9,0	0/0:17,0:17:38.15:0,38,2087	0/0:13,0:13:33.11:0,33,2288	0/0:13,0:13:18.06:0,18,554	1/1:12,2:14:20.93:448,21,0	1/1:15,0:13:11.93:208,12,0	1/1:5,14:19:9.03:413,9,0	0/0:10,0:10:9.44:0,9,365	0/0:11,0:10:5.05:0,5,86	0/0:13,0:13:7.74:0,8,260	1/1:9,0:9:8.98:73,9,0	1/1:1,11:12:6.02:121,6,0	1/1:1,11:12:6.02:215,6,0	0/0:16,0:16:12.01:0,12,224	0/1:19,0:19:20.77:21,0,794	0/1:14,0:13:49.32:49,0,170	0/0:5,0:5:3.01:0,3,61
chr10	57031319	.	GTGTGTA	G	2060.03	PASS	AB=1.000;AC=35;AF=0.648;AN=54;BaseQRankSum=7.897;DP=457;FS=4.344;HRun=0;HaplotypeScore=112.4600;InbreedingCoeff=0.1487;MQ=47.68;MQ0=14;MQRankSum=-4.538;QD=6.01;ReadPosRankSum=0.351;VQSLOD=1.7049;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:33:39.15:0,39,1307	1/1:2,5:7:6.02:137,6,0	./.	0/1:23,0:6:13.36:21,0,13	0/0:24,0:24:24.50:0,24,1058	1/1:15,0:15:20.92:167,21,0	1/1:14,0:14:3:25,3,0	0/1:20,0:19:51.18:121,0,51	0/1:18,0:18:26.08:78,0,26	0/1:21,0:19:32.16:185,0,32	0/0:14,0:14:2.98:0,3,22	1/1:13,0:13:8.63:56,9,0	0/0:16,0:16:38.49:0,38,656	0/0:14,0:14:35.33:0,35,617	0/1:15,0:15:72.01:73,0,72	1/1:17,0:17:20.63:194,21,0	1/1:18,0:16:14.92:136,15,0	1/1:16,0:16:8.96:107,9,0	0/1:11,0:9:21.11:21,0,61	1/1:11,0:10:6.02:94,6,0	0/1:20,0:20:44.11:44,0,106	1/1:11,0:11:8.48:66,8,0	1/1:11,0:11:5.83:33,6,0	1/1:12,0:12:5.93:62,6,0	1/1:18,0:18:5.60:103,6,0	0/1:25,0:25:30.50:239,0,30	0/1:20,0:19:1.11:217,0,1	1/1:7,0:7:8.01:54,8,0
chr10	57031323	.	GTA	G	1408.17	PASS	AB=1.000;AC=34;AF=0.630;AN=54;BaseQRankSum=8.175;DP=476;FS=0.540;HRun=0;HaplotypeScore=97.9958;InbreedingCoeff=0.0586;MQ=46.51;MQ0=12;MQRankSum=-5.377;QD=3.87;ReadPosRankSum=1.609;VQSLOD=2.1316;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:33:20.14:0,20,634	1/1:6,0:6:5.98:46,6,0	./.	0/1:23,0:5:13.36:21,0,13	0/0:24,0:24:20.05:0,20,546	1/1:20,0:20:26.90:215,27,0	1/1:0,15:15:3:25,3,0	0/1:20,0:19:51.18:121,0,51	0/1:19,0:19:38.04:38,0,51	0/1:23,0:21:85.98:130,0,86	0/0:15,0:15:5.98:0,6,46	1/1:14,0:15:11.56:81,12,0	0/0:16,0:16:5.70:0,6,307	0/0:14,0:14:17.84:0,18,197	0/1:17,0:17:41.14:41,0,97	1/1:19,0:19:20.67:138,21,0	1/1:17,0:15:14.82:108,15,0	1/1:16,0:16:8.79:52,9,0	0/1:12,0:10:14.59:15,0,81	1/1:12,0:11:8.40:48,8,0	0/1:22,0:22:40.19:40,0,128	1/1:12,0:12:8.34:66,8,0	1/1:11,0:11:5.83:33,6,0	1/1:11,0:11:5.85:34,6,0	1/1:18,0:18:1.78:38,2,0	0/1:27,0:27:90.23:188,0,90	0/1:21,0:20:31.95:85,0,32	0/1:8,0:8:17.21:18,0,17
chr10	57031325	.	ATG	A	349.79	PASS	AB=0.957;AC=25;AF=0.481;AN=52;BaseQRankSum=3.867;DP=476;FS=2.700;HRun=0;HaplotypeScore=106.4160;InbreedingCoeff=-0.0016;MQ=46.51;MQ0=12;MQRankSum=-1.493;QD=1.08;ReadPosRankSum=2.405;VQSLOD=2.0928;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:34,1:33:55.73:56,0,426	1/1:5,0:5:5.60:25,6,0	./.	0/0:26,0:6:2.90:0,3,16	0/0:24,0:24:12.70:0,13,257	0/1:20,0:20:0:0,0,0	0/0:17,0:17:2.99:0,3,23	0/0:21,0:20:15.83:0,16,154	0/1:19,0:19:17.12:17,0,129	0/1:23,0:21:12.88:13,0,211	0/0:15,0:15:6.02:0,6,87	0/1:14,0:15:0.20:0,0,0	0/1:13,3:16:50.32:50,0,149	0/1:14,0:14:33.77:34,0,148	0/1:16,1:17:11.66:12,0,214	1/1:19,0:19:5.68:27,6,0	1/1:15,0:13:2.84:14,3,0	1/1:14,0:14:5.68:27,6,0	0/1:11,1:10:22.12:22,0,113	1/1:11,1:11:8.81:77,9,0	0/0:22,0:22:21:0,21,303	0/1:11,0:11:0:0,0,1	./.	1/1:11,0:11:2.80:13,3,0	0/1:18,1:19:38.95:39,0,57	0/1:27,0:27:1.35:1,0,280	0/1:18,1:20:68.49:68,0,83	0/0:8,0:8:9.53:0,10,66
chr10	57031640	.	CTGTCCATCCTTCAACTA	C	6021.78	PASS	AC=16;AF=0.296;AN=54;BaseQRankSum=10.795;DP=585;FS=4.648;HRun=0;HaplotypeScore=251.5369;InbreedingCoeff=0.9391;MQ=93.74;MQ0=0;MQRankSum=-10.228;QD=46.32;ReadPosRankSum=2.182;VQSLOD=4.0470;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:81.26:0,81,5724	0/0:8,0:8:18.06:0,18,1277	0/0:26,0:26:36.12:0,36,1913	0/0:31,0:31:48.14:0,48,2702	0/0:20,0:20:39.10:0,39,2302	1/1:4,16:20:33.11:1497,33,0	1/1:14,7:21:9.03:375,9,0	0/0:29,0:29:42.13:0,42,2643	0/0:22,0:22:51.17:0,51,3696	0/0:30,0:30:72.25:0,72,4927	0/0:9,0:9:18.06:0,18,1313	1/1:11,12:23:27.09:1217,27,0	0/0:27,0:27:75.24:0,75,5406	0/0:25,0:25:69.22:0,69,4690	0/0:32,0:32:84.27:0,84,6048	1/1:11,10:21:27.09:1261,27,0	./.	1/1:6,8:14:15.05:659,15,0	0/0:15,0:15:27.09:0,27,1763	0/0:19,0:19:45.15:0,45,2710	0/0:27,0:27:51.17:0,51,4011	1/1:5,6:11:15.05:529,15,0	1/1:5,2:7:3.01:112,3,0	1/1:9,4:13:9.03:372,9,0	0/0:13,0:13:27.09:0,27,1851	0/0:29,0:29:78.27:0,78,5839	0/0:31,0:31:75.24:0,75,5233	0/0:7,0:7:18.06:0,18,1193
chr10	57031976	.	C	CA	2543.80	PASS	AC=42;AF=0.955;AN=44;DP=118;FS=0.000;HRun=2;HaplotypeScore=31.9874;InbreedingCoeff=0.1695;MQ=35.69;MQ0=9;QD=24.70;VQSLOD=3.1141;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,2:3:6.02:85,6,0	./.	./.	0/0:10,0:2:0:0,0,0	1/1:0,3:3:2.97:20,3,0	1/1:0,2:2:2.98:22,3,0	1/1:1,3:4:10.28:123,10,0	1/1:2,5:6:15.05:216,15,0	./.	1/1:0,4:4:12.04:172,12,0	1/1:0,1:1:2.97:20,3,0	1/1:3,5:8:18.02:220,18,0	1/1:1,6:7:17.96:206,18,0	1/1:1,5:6:14.96:164,15,0	1/1:2,3:4:11.99:133,12,0	1/1:0,3:3:9.03:125,9,0	1/1:2,7:9:24.08:333,24,0	1/1:2,3:5:15.05:206,15,0	1/1:4,2:6:3.01:43,3,0	1/1:0,3:3:6.73:36,7,0	1/1:1,4:5:3.85:22,4,0	./.	./.	1/1:2,3:4:2.68:41,3,0	1/1:2,1:3:1.36:2,1,0	1/1:0,6:6:15.05:215,15,0	1/1:1,6:7:14.93:215,15,0	./.
chr10	57031978	.	A	AC	1455.21	PASS	AB=1.000;AC=39;AF=0.975;AN=40;BaseQRankSum=0.326;DP=114;FS=0.000;HRun=3;HaplotypeScore=33.7756;InbreedingCoeff=0.2686;MQ=35.86;MQ0=9;MQRankSum=-1.481;QD=15.00;ReadPosRankSum=1.682;VQSLOD=2.6133;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,0:2:6:53,6,0	./.	./.	./.	1/1:3,0:3:1.55:4,2,0	1/1:2,0:2:1.55:4,2,0	1/1:3,0:3:8.94:68,9,0	1/1:7,0:6:14.93:113,15,0	./.	1/1:4,0:4:11.94:91,12,0	1/1:1,0:1:1.25:3,1,0	1/1:5,2:7:15.84:147,16,0	1/1:6,1:7:14.79:117,15,0	1/1:5,1:6:10.80:105,11,0	1/1:5,0:4:9.25:62,9,0	1/1:3,0:3:8.97:71,9,0	1/1:7,2:9:23.96:223,24,0	1/1:3,2:5:15:153,15,0	0/1:6,0:6:13.90:15,0,14	1/1:3,0:3:0.44:2,0,0	1/1:5,0:5:0.89:2,1,0	./.	./.	1/1:3,2:4:2.67:25,3,0	./.	1/1:6,0:6:14.96:119,15,0	1/1:7,0:7:17.98:164,18,0	./.
chr10	57032022	.	TC	T	2166.93	PASS	AB=0.500;AC=36;AF=0.900;AN=40;BaseQRankSum=0.560;DP=109;FS=0.000;HRun=1;HaplotypeScore=105.2480;InbreedingCoeff=0.3266;MQ=29.28;MQ0=0;MQRankSum=0.102;QD=21.89;ReadPosRankSum=1.630;VQSLOD=3.7365;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,6:6:8.86:103,9,0	./.	./.	./.	0/1:0,4:4:0.46:0,0,0	1/1:0,8:8:15.05:179,15,0	1/1:0,6:6:8.95:108,9,0	1/1:0,2:2:5.88:51,6,0	1/1:0,2:2:6.02:70,6,0	1/1:0,3:3:9.03:107,9,0	./.	1/1:0,5:5:14.99:151,15,0	1/1:0,5:5:12.04:144,12,0	1/1:1,8:9:18.06:215,18,0	1/1:0,2:2:3.01:35,3,0	1/1:0,3:3:9.03:106,9,0	1/1:0,11:11:29.58:331,30,0	1/1:0,4:4:9.03:108,9,0	./.	0/1:0,3:3:0.01:0,0,0	0/0:0,4:4:0.89:0,1,2	./.	./.	1/1:0,3:2:3.01:36,3,0	1/1:0,4:3:6.49:73,6,0	1/1:1,4:5:15.04:172,15,0	1/1:0,14:14:22.31:254,22,0	./.
chr10	57032048	.	TC	T	1129.17	PASS	AB=0.750;AC=43;AF=0.977;AN=44;DP=109;FS=0.000;HRun=1;HaplotypeScore=145.8197;InbreedingCoeff=0.1749;MQ=29.95;MQ0=0;QD=10.36;VQSLOD=1.5838;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,5:5:7.96:35,8,0	./.	./.	./.	1/1:1,2:3:2.49:9,2,0	1/1:1,5:6:13.94:63,14,0	1/1:1,2:3:5.49:23,5,0	1/1:1,1:2:5.69:30,6,0	1/1:0,2:2:2.71:13,3,0	1/1:0,4:4:11.73:70,12,0	1/1:0,2:2:5.27:21,5,0	1/1:0,6:6:17.22:103,17,0	1/1:0,6:6:13.34:55,13,0	1/1:0,9:9:16.68:106,17,0	1/1:0,4:4:8.19:36,8,0	1/1:0,7:7:16.75:79,17,0	1/1:1,8:9:17.21:80,17,0	1/1:0,3:3:8.90:68,9,0	./.	1/1:0,4:4:11.02:48,11,0	0/1:2,1:3:0:0,0,0	1/1:0,3:3:8.23:40,8,0	./.	1/1:0,2:2:2.60:10,3,0	1/1:0,3:3:8.07:34,8,0	1/1:0,6:6:16.94:85,17,0	1/1:3,14:17:35.05:196,35,0	./.
chr10	57032054	.	G	GT	1414.67	PASS	AC=44;AF=1.000;AN=44;DP=87;FS=0.000;HRun=0;HaplotypeScore=126.5166;InbreedingCoeff=-0.0097;MQ=29.00;MQ0=0;QD=16.26;VQSLOD=5.7014;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,5:5:9.91:52,10,0	./.	./.	./.	1/1:0,2:2:2.88:15,3,0	1/1:0,5:5:14.60:84,15,0	1/1:0,2:2:5.81:32,6,0	1/1:0,1:1:2.99:23,3,0	1/1:0,1:1:2.90:16,3,0	1/1:0,4:4:11.96:93,12,0	1/1:0,2:2:5.74:30,6,0	1/1:0,3:3:8.78:52,9,0	1/1:0,6:6:14.96:82,15,0	1/1:0,5:5:11.52:62,12,0	1/1:0,5:5:11.75:93,12,0	1/1:0,6:6:17.63:109,18,0	1/1:0,7:7:17.56:105,18,0	1/1:0,1:1:2.98:22,3,0	./.	1/1:0,5:5:14.79:128,15,0	1/1:0,1:1:2.50:9,2,0	1/1:0,2:2:5.78:31,6,0	./.	1/1:0,2:2:5.85:51,6,0	1/1:0,3:3:8.76:51,9,0	1/1:0,6:6:17.76:133,18,0	1/1:0,12:13:32.50:217,33,0	./.
chr10	57033019	.	A	ATCAG	2057.91	PASS	AB=1.000;AC=40;AF=0.952;AN=42;BaseQRankSum=-0.460;DP=198;FS=39.964;HRun=0;HaplotypeScore=27.3192;InbreedingCoeff=-0.0253;MQ=50.62;MQ0=75;MQRankSum=-0.225;QD=12.18;ReadPosRankSum=3.369;VQSLOD=1.3735;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/1:42,0:5:0.40:0,0,95	0/1:31,0:8:22.43:22,0,112	1/1:2,0:1:3.01:51,3,0	1/1:6,0:2:0.28:49,0,0	./.	1/1:10,0:7:6.01:78,6,0	1/1:6,0:4:12.04:177,12,0	1/1:1,5:5:8.98:168,9,0	1/1:1,0:1:3.01:36,3,0	1/1:3,0:2:3.01:64,3,0	1/1:3,0:1:3:29,3,0	1/1:2,0:1:3.01:37,3,0	1/1:4,0:1:3.01:37,3,0	1/1:2,0:1:3.01:52,3,0	./.	1/1:6,0:2:3.01:51,3,0	1/1:7,0:6:15.05:289,15,0	1/1:7,0:5:12.04:194,12,0	./.	1/1:3,0:3:9.03:125,9,0	1/1:3,0:2:3.01:53,3,0	./.	1/1:4,0:3:5.31:97,5,0	1/1:7,0:4:12.04:209,12,0	./.	1/1:14,0:7:21.07:333,21,0
chr10	57033787	.	A	ATG	24666.06	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-14.396;DP=877;FS=10.799;HRun=0;HaplotypeScore=96.6968;InbreedingCoeff=0.9703;MQ=64.26;MQ0=3;MQRankSum=-2.696;QD=35.85;ReadPosRankSum=0.937;VQSLOD=6.6349;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:84.25:0,84,1036	1/1:2,12:14:30.10:494,30,0	0/0:32,0:28:41.42:0,41,454	0/0:28,0:24:45.47:0,45,496	0/0:37,0:37:90.29:0,90,1125	1/1:4,25:29:63.22:1040,63,0	1/1:6,25:31:57.19:940,57,0	1/1:12,29:42:90.27:1413,90,0	1/1:4,38:42:99:1780,107,0	1/1:7,23:30:69.24:1136,69,0	1/1:7,19:25:48.16:771,48,0	1/1:5,27:32:9.29:1212,9,0	0/0:27,0:27:51.14:0,51,638	0/0:24,0:24:66.21:0,66,826	1/1:6,21:27:54.18:888,54,0	1/1:4,33:35:93.32:1535,93,0	1/1:3,37:40:93.32:1521,93,0	1/1:4,21:24:6.73:808,7,0	1/1:9,10:19:33.11:544,33,0	1/1:8,27:35:49.76:1330,50,0	1/1:10,62:73:99:2525,154,0	1/1:5,21:27:54.10:859,54,0	1/1:5,20:25:51.17:842,51,0	1/1:2,27:29:78.27:1287,78,0	1/1:3,16:19:42.14:693,42,0	1/1:8,24:32:37.72:1151,38,0	1/1:8,33:41:90.31:1484,90,0	1/1:1,11:12:26.96:411,27,0
chr10	57033885	.	CA	C	8730.31	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=4.029;DP=534;FS=8.651;HRun=1;HaplotypeScore=74.2566;InbreedingCoeff=0.9496;MQ=52.29;MQ0=35;MQRankSum=-5.237;QD=22.16;ReadPosRankSum=-0.598;VQSLOD=3.9637;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:41:66.16:0,66,895	1/1:2,3:5:14.98:142,15,0	0/0:19,0:7:10.73:0,11,76	0/0:24,1:5:3.15:0,3,89	0/0:13,0:13:30.08:0,30,386	1/1:6,6:12:19.90:219,20,0	1/1:8,13:21:49.57:470,50,0	1/1:7,12:14:38.74:404,39,0	1/1:8,7:15:35.94:355,36,0	1/1:5,10:15:36.04:407,36,0	1/1:10,7:16:36.07:409,36,0	1/1:8,3:11:30.06:335,30,0	0/0:25,0:25:48.13:0,48,644	0/0:16,0:16:39.09:0,39,565	1/1:14,12:26:56.72:628,57,0	1/1:15,8:22:58.79:577,59,0	1/1:14,10:24:61.68:626,62,0	1/1:13,7:18:20.83:339,21,0	1/1:6,11:16:40.74:393,41,0	1/1:11,12:23:41.69:412,42,0	1/1:10,13:22:38.74:346,39,0	1/1:8,10:18:44.68:461,45,0	1/1:14,8:22:34.52:372,35,0	1/1:13,6:19:47.72:480,48,0	1/1:5,11:16:23.99:253,24,0	1/1:11,6:17:38.96:432,39,0	1/1:8,10:18:38.99:398,39,0	1/1:7,6:13:24.06:271,24,0
chr10	57038020	.	GA	G	6634.11	PASS	AB=0.599;AC=49;AF=0.875;AN=56;BaseQRankSum=8.808;DP=487;FS=2.033;HRun=3;HaplotypeScore=269.2530;InbreedingCoeff=0.3129;MQ=36.04;MQ0=1;MQRankSum=-4.389;QD=13.74;ReadPosRankSum=7.673;VQSLOD=3.8171;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:4,17:21:29.79:223,30,0	0/1:5,5:10:7.08:95,0,7	0/0:3,0:2:4.07:0,4,13	0/0:1,0:1:2.04:0,2,6	1/1:3,28:31:59.10:431,59,0	1/1:3,11:14:32.85:252,33,0	1/1:6,13:18:34.75:246,35,0	0/1:7,21:23:30.25:300,0,30	1/1:0,10:10:23.68:169,24,0	1/1:3,21:24:49.32:309,49,0	1/1:2,24:26:37.69:300,38,0	1/1:4,11:15:32.25:254,32,0	1/1:3,15:18:23.83:323,24,0	1/1:0,13:13:29.87:229,30,0	1/1:4,8:12:26.82:205,27,0	1/1:3,21:24:62.62:479,63,0	1/1:4,14:18:29.81:222,30,0	1/1:3,9:13:5.84:152,6,0	1/1:5,11:16:26.71:205,27,0	1/1:2,26:28:55.92:428,56,0	1/1:5,8:13:9.26:55,9,0	1/1:0,11:11:20.91:161,21,0	1/1:4,19:23:31.58:371,32,0	1/1:2,12:14:16.72:134,17,0	1/1:0,18:18:38.66:293,39,0	0/1:7,26:33:35.62:386,0,36	1/1:0,22:22:44.33:302,44,0	1/1:0,9:9:14.91:111,15,0
chr10	57038064	.	AAAAG	A	4740.90	PASS	AB=0.722;AC=17;AF=0.304;AN=56;BaseQRankSum=3.847;DP=521;FS=1.877;HRun=0;HaplotypeScore=202.5149;InbreedingCoeff=0.9006;MQ=48.11;MQ0=10;MQRankSum=-4.397;QD=31.40;ReadPosRankSum=0.003;VQSLOD=4.4982;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:39.06:0,39,854	0/0:4,0:4:11.99:0,12,245	0/0:11,0:3:8.79:0,9,91	0/0:15,0:10:18.97:0,19,214	0/0:31,0:31:72.24:0,72,1666	1/1:6,14:20:42.08:687,42,0	1/1:7,7:12:30.04:442,30,0	0/0:32,0:27:78.07:0,78,1243	0/0:11,0:11:27.09:0,27,641	0/0:23,0:23:60.21:0,60,1454	0/0:29,0:29:60.07:0,60,1350	0/1:8,5:13:10.31:309,0,10	0/0:15,0:15:36.09:0,36,831	0/0:15,0:15:27.09:0,27,679	0/0:15,0:15:45.10:0,45,1046	1/1:9,15:24:56.97:830,57,0	1/1:7,18:25:42.03:636,42,0	1/1:3,14:17:30.10:501,30,0	0/0:15,0:13:33.11:0,33,772	0/0:29,0:28:65.98:0,66,1431	0/0:7,0:7:12.04:0,12,301	1/1:0,6:6:18.06:308,18,0	1/1:11,12:23:50.79:633,51,0	1/1:2,7:9:24.08:395,24,0	0/0:24,0:24:63.15:0,63,1482	0/0:27,0:27:75.26:0,75,1789	0/0:32,0:32:75.18:0,75,1616	0/0:18,0:18:42.09:0,42,955
chr10	57038177	.	GAAGA	G	756.14	PASS	AB=0.962;AC=12;AF=0.222;AN=54;BaseQRankSum=-2.533;DP=584;FS=6.756;HRun=0;HaplotypeScore=168.6825;InbreedingCoeff=-0.3174;MQ=48.13;MQ0=12;MQRankSum=-1.010;QD=3.14;ReadPosRankSum=-6.735;VQSLOD=-0.3186;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:57.96:0,58,770	0/1:7,4:11:27.76:187,0,28	0/0:8,0:2:6.02:0,6,97	./.	0/0:24,0:23:66.17:0,66,1273	0/0:20,0:19:9.01:0,9,439	0/0:18,0:14:26.78:0,27,221	0/1:42,13:47:99:403,0,352	0/0:22,0:22:41.68:0,42,506	0/0:31,0:27:10.29:0,10,562	0/0:30,0:30:27.52:0,28,664	0/1:18,0:18:29.97:30,0,350	0/0:23,0:23:66.04:0,66,1124	0/0:15,0:14:36.03:0,36,592	0/1:9,0:9:30.57:31,0,97	0/1:11,0:11:17:17,0,205	0/0:19,0:19:0.73:0,1,378	0/1:24,0:24:8.64:9,0,395	0/1:23,0:17:25.49:25,0,271	0/1:22,0:20:2.47:2,0,479	0/0:13,0:13:5.34:0,5,185	0/1:14,0:14:21.20:21,0,229	0/1:20,0:20:57.39:61,0,57	0/1:16,0:16:78.16:78,0,191	0/0:24,0:23:8.87:0,9,614	0/0:38,0:36:67.83:0,68,1014	0/0:32,0:32:3.01:0,3,653	0/1:17,0:18:31.83:32,0,501
chr10	57038201	.	G	GAAGA	1001.93	PASS	AB=1.000;AC=13;AF=0.260;AN=50;BaseQRankSum=-2.864;DP=589;FS=1.564;HRun=0;HaplotypeScore=169.1891;InbreedingCoeff=0.5216;MQ=47.39;MQ0=12;MQRankSum=1.865;QD=5.39;ReadPosRankSum=-2.181;VQSLOD=2.6296;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:35.86:0,36,516	1/1:13,0:13:9.02:113,9,0	./.	./.	0/0:24,0:23:4.57:0,5,288	0/0:19,0:18:21.03:0,21,258	0/0:19,0:15:6.01:0,6,73	./.	1/1:15,11:28:3.01:70,3,0	0/0:33,0:30:17.53:0,18,456	0/0:28,0:28:25.69:0,26,448	0/0:18,0:18:21.07:0,21,319	0/0:23,0:23:33.04:0,33,443	0/0:13,0:12:21.02:0,21,293	1/1:3,14:16:2.96:70,3,0	0/0:13,0:13:12.04:0,12,175	0/1:14,0:14:0.89:1,0,243	0/0:21,0:21:27.02:0,27,346	0/0:25,0:21:17.53:0,18,135	0/0:21,0:18:0.57:0,1,38	0/0:15,0:15:11.26:0,11,95	0/0:14,0:14:15.04:0,15,192	0/0:15,0:15:18.06:0,18,268	0/0:20,0:20:16.01:0,16,373	1/1:23,1:22:12.04:262,12,0	1/1:27,12:37:27.09:571,27,0	0/1:34,0:34:39.42:39,0,389	0/1:17,0:17:28.17:28,0,87
chr10	57038205	.	A	AAAGG	2460.16	PASS	AB=1.000;AC=16;AF=0.308;AN=52;BaseQRankSum=7.516;DP=582;FS=1.691;HRun=0;HaplotypeScore=159.1932;InbreedingCoeff=0.0922;MQ=47.78;MQ0=13;MQRankSum=-4.140;QD=7.09;ReadPosRankSum=1.298;VQSLOD=3.0384;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:66.84:0,67,842	1/1:4,9:13:23.82:278,24,0	./.	./.	0/0:24,0:23:16.89:0,17,674	0/0:20,0:19:56.62:0,57,428	0/0:17,0:13:23.76:0,24,178	0/1:50,0:38:68.45:133,0,68	1/1:29,0:29:38.89:338,39,0	0/1:34,0:30:99:301,0,502	0/1:28,0:28:99:150,0,427	0/0:17,0:17:50.74:0,51,397	0/0:23,0:23:65.62:0,66,834	0/0:15,0:14:41.92:0,42,525	0/1:18,0:17:40.94:56,0,41	0/0:12,0:12:32.80:0,33,250	0/0:14,0:14:16.32:0,16,198	0/0:21,0:21:37.75:0,38,395	0/1:24,0:21:81:81,0,304	0/1:21,0:18:99:124,0,156	0/1:15,0:15:54.60:55,0,220	0/0:14,0:14:38.39:0,38,249	0/0:14,0:14:23.68:0,24,176	0/0:20,0:20:48.90:0,49,339	0/1:23,0:21:18.96:336,0,19	1/1:37,0:35:16.09:674,16,0	0/1:35,0:35:53.74:54,0,872	0/1:20,0:20:53.10:53,0,235
chr10	57039376	.	G	GAGA	574.80	PASS	AB=0.992;AC=9;AF=0.161;AN=56;BaseQRankSum=6.316;DP=644;FS=8.355;HRun=0;HaplotypeScore=187.7555;InbreedingCoeff=0.1066;MQ=55.57;MQ0=24;MQRankSum=-8.307;QD=3.28;ReadPosRankSum=2.409;VQSLOD=1.5083;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:26:58.69:0,59,1119	1/1:15,3:17:23.62:353,24,0	0/0:45,0:19:27.59:0,28,450	0/0:56,0:21:16.35:0,16,263	0/0:26,0:26:78.18:0,78,1140	0/1:34,0:34:18.97:19,0,203	0/1:19,0:19:4.22:4,0,103	0/1:30,2:30:99:282,0,126	0/0:22,0:22:25.01:0,25,256	0/0:32,0:32:74.13:0,74,654	0/0:20,0:20:8.62:0,9,130	0/0:14,0:13:19.73:0,20,192	0/0:16,0:16:45.12:0,45,702	0/0:19,0:18:51.07:0,51,799	0/0:17,0:17:27.42:0,27,226	0/1:29,0:26:28.55:29,0,57	0/1:14,0:14:16.62:17,0,54	0/0:13,0:11:12.28:0,12,143	0/0:21,0:15:39.82:0,40,353	0/0:16,0:16:19.56:0,20,159	0/0:23,0:23:11.45:0,11,108	0/0:18,0:18:11.91:0,12,179	0/1:19,0:18:1.20:1,0,112	0/1:10,0:7:1.06:1,0,19	0/0:25,0:24:13.45:0,13,92	0/0:23,0:23:40.30:0,40,439	0/0:26,0:26:33.98:0,34,221	0/0:7,0:7:8.04:0,8,58
chr10	57039381	.	G	GAGA	13757.86	PASS	AB=0.807;AC=37;AF=0.661;AN=56;BaseQRankSum=9.530;DP=637;FS=4.389;HRun=0;HaplotypeScore=144.6446;InbreedingCoeff=0.4097;MQ=60.61;MQ0=22;MQRankSum=-7.798;QD=30.78;ReadPosRankSum=6.711;VQSLOD=4.8594;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:27:80.32:0,80,1267	0/1:15,2:17:85.47:313,0,85	0/0:40,0:17:34.59:0,35,524	0/0:58,0:25:20.17:0,20,431	0/0:28,0:28:81.26:0,81,1299	0/1:30,0:35:76.55:413,0,77	0/1:8,0:18:14.92:339,0,15	0/1:22,5:27:99:476,0,508	1/1:2,17:21:27.06:1043,27,0	1/1:4,30:34:87.30:1970,87,0	1/1:0,14:16:33.11:805,33,0	0/1:6,0:10:49.02:117,0,49	0/0:14,0:14:42.14:0,42,782	0/0:21,0:20:60.17:0,60,1008	1/1:0,16:16:33.11:787,33,0	1/1:17,0:24:59.92:515,60,0	1/1:11,0:13:5.50:222,6,0	0/1:10,0:10:21.60:116,0,22	1/1:10,13:18:54.18:1069,54,0	1/1:2,13:17:42.10:942,42,0	1/1:4,21:24:11.97:296,12,0	1/1:13,0:17:27.83:287,28,0	0/1:18,0:19:12.59:148,0,13	1/1:9,0:7:6.49:53,6,0	1/1:1,20:25:39.06:936,39,0	1/1:0,22:23:66.23:1526,66,0	1/1:3,26:29:48.16:1164,48,0	1/1:0,7:7:9.03:222,9,0
chr10	57039386	.	G	GAGA	7603.82	PASS	AB=0.950;AC=35;AF=0.625;AN=56;BaseQRankSum=10.241;DP=611;FS=9.074;HRun=0;HaplotypeScore=168.4883;InbreedingCoeff=0.3538;MQ=64.06;MQ0=22;MQRankSum=-8.673;QD=17.85;ReadPosRankSum=7.707;VQSLOD=3.4959;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:25:69.18:0,69,1130	0/1:10,0:14:19.15:249,0,19	0/0:42,0:19:43.30:0,43,496	0/0:55,0:27:28.06:0,28,522	0/0:24,0:24:54.17:0,54,914	1/1:10,15:31:45.62:1095,46,0	1/1:13,4:17:10.82:471,11,0	0/1:13,0:14:27.97:248,0,28	1/1:16,0:18:3.48:186,3,0	0/1:35,0:35:1.68:404,0,2	1/1:14,0:14:16.18:186,16,0	1/1:12,0:11:23.95:270,24,0	0/0:16,0:16:45.13:0,45,796	0/0:22,0:21:57.18:0,57,987	0/1:18,0:18:14.59:163,0,15	1/1:13,13:23:53.75:998,54,0	1/1:7,8:15:28.76:479,29,0	1/1:8,3:9:20.79:316,21,0	0/1:19,0:14:64.93:103,0,65	0/1:20,0:22:55.80:156,0,56	0/1:21,0:20:1.03:51,0,1	1/1:13,8:21:48.16:787,48,0	1/1:11,7:18:33.10:547,33,0	1/1:8,4:8:7.96:156,8,0	1/1:24,0:25:25.58:266,26,0	1/1:23,0:23:35.21:263,35,0	0/1:26,0:26:3.83:187,0,4	0/1:11,0:11:23.49:23,0,52
chr10	57039394	.	G	GGA	7886.33	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=6.875;DP=565;FS=2.381;HRun=0;HaplotypeScore=149.7680;InbreedingCoeff=0.9367;MQ=69.70;MQ0=8;MQRankSum=-7.856;QD=20.22;ReadPosRankSum=0.244;VQSLOD=5.2073;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:69.10:0,69,893	1/1:10,0:10:24.63:146,25,0	0/0:39,0:21:27.98:0,28,349	0/0:52,0:29:1.12:0,1,362	0/0:22,0:22:51.05:0,51,623	1/1:10,13:29:71.70:816,72,0	1/1:5,4:17:33.17:395,33,0	1/1:20,0:19:45.28:390,45,0	1/1:18,0:18:45.96:373,46,0	1/1:29,0:28:53.53:518,54,0	1/1:13,0:14:37.95:317,38,0	1/1:3,0:10:17.79:132,18,0	0/0:18,0:18:53.83:0,54,656	0/0:19,0:18:54.14:0,54,716	1/1:21,0:21:47.44:394,47,0	1/1:5,13:22:63.84:742,64,0	1/1:2,8:17:38.22:396,38,0	1/1:1,3:9:12.95:190,13,0	1/1:17,0:17:33.43:238,33,0	1/1:21,0:21:53.26:408,53,0	1/1:13,0:14:23.87:202,24,0	1/1:1,7:18:38.90:424,39,0	1/1:1,6:15:21.68:293,22,0	1/1:5,3:7:11.98:133,12,0	1/1:23,0:23:47.90:406,48,0	1/1:24,0:25:58.96:444,59,0	1/1:21,0:21:39.24:372,39,0	1/1:9,0:9:20.48:158,20,0
chr10	57039817	.	GTT	G	1750.21	PASS	AB=0.806;AC=18;AF=0.321;AN=56;BaseQRankSum=0.709;DP=502;FS=0.463;HRun=16;HaplotypeScore=70.1378;InbreedingCoeff=0.7235;MQ=71.22;MQ0=2;MQRankSum=2.284;QD=9.72;ReadPosRankSum=8.946;VQSLOD=1.4002;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:31:66.56:0,67,678	0/0:3,0:3:3.01:0,3,39	0/0:28,0:18:1.35:0,1,81	0/1:26,1:18:21.39:21,0,77	0/0:16,0:19:46.21:0,46,459	1/1:5,9:15:26.56:212,27,0	1/1:4,13:21:26.38:282,26,0	0/0:18,0:23:40.97:0,41,378	0/0:5,0:12:3.01:0,3,30	0/0:25,0:29:60.42:0,60,572	0/0:12,0:24:50.76:0,51,457	1/1:4,4:9:8.51:62,9,0	0/0:16,0:21:50.87:0,51,468	0/0:8,0:9:20.99:0,21,222	0/0:7,0:17:17.98:0,18,166	1/1:6,16:22:44.80:373,45,0	1/1:6,13:26:9.07:300,9,0	1/1:7,11:22:20.17:190,20,0	0/0:10,0:20:41.90:0,42,379	0/0:5,0:15:23.93:0,24,219	0/0:3,0:11:6.01:0,6,68	1/1:7,6:14:23.58:186,24,0	0/1:5,6:11:1.64:107,0,2	1/1:2,10:13:26.62:212,27,0	0/0:6,0:15:17.97:0,18,170	0/0:5,0:20:45.02:0,45,442	0/0:5,0:12:6.48:0,6,58	0/0:4,0:11:6.44:0,6,48
chr10	57040054	.	T	TG	649.12	PASS	AB=0.754;AC=32;AF=0.593;AN=54;BaseQRankSum=0.041;DP=189;FS=20.300;HRun=0;HaplotypeScore=165.1479;InbreedingCoeff=0.3210;MQ=34.40;MQ0=0;MQRankSum=-0.945;QD=4.60;ReadPosRankSum=-2.875;VQSLOD=1.1599;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/0:0,4:4:4.21:0,4,10	1/1:1,0:1:2.04:6,2,0	0/1:2,0:2:7.52:15,0,8	1/1:5,0:5:14.47:79,14,0	0/1:0,6:6:1.38:57,0,1	0/0:0,11:11:11.44:0,11,28	1/1:0,7:7:2.83:8,3,0	0/0:0,4:4:4.16:0,4,10	1/1:0,25:25:4.56:19,5,0	1/1:0,13:13:14.94:150,15,0	0/0:2,3:5:4.90:0,5,20	0/1:8,0:8:4.51:53,0,5	0/1:3,0:3:0.83:27,0,1	0/0:0,13:13:15.87:0,16,41	0/0:0,4:4:3.07:0,3,7	0/0:2,2:4:2.03:0,2,5	1/1:0,1:1:2.04:6,2,0	1/1:0,3:3:0.23:1,0,0	1/1:0,13:13:18.47:182,18,0	1/1:0,2:2:2.37:33,2,0	1/1:0,5:5:0.74:41,1,0	1/1:2,7:9:5.50:59,6,0	0/0:0,3:3:4.26:0,4,11	0/1:0,11:11:3.62:23,0,4	1/1:0,9:9:4.57:13,5,0	0/1:1,9:10:0.71:13,0,1	1/1:0,8:8:3.14:8,3,0
chr10	57040070	.	GCTCC	G	40.55	PASS	AB=0.933;AC=7;AF=0.140;AN=50;BaseQRankSum=0.108;DP=196;FS=0.000;HRun=0;HaplotypeScore=191.6424;InbreedingCoeff=0.0219;MQ=28.87;MQ0=0;MQRankSum=0.643;QD=1.23;ReadPosRankSum=0.852;VQSLOD=2.1053;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/0:6,0:6:17.65:0,18,108	./.	./.	0/0:7,0:7:1.55:0,2,4	0/1:7,0:7:28.45:28,0,41	0/1:10,1:11:3.04:3,0,102	0/0:9,0:9:17.82:0,18,124	0/0:4,0:4:11.33:0,11,59	0/0:25,0:25:68.21:0,68,442	0/0:13,0:13:3.82:0,4,20	0/1:6,0:6:16.79:17,0,31	0/0:7,0:7:17.41:0,17,132	0/0:2,0:2:5.97:0,6,72	0/0:13,0:13:37.07:0,37,210	0/1:5,0:5:25.50:27,0,25	0/0:2,3:5:5.80:0,6,32	1/1:0,1:1:3.01:37,3,0	0/0:3,0:3:5.95:0,6,42	0/0:13,0:13:3.43:0,3,20	0/0:2,0:2:2.94:0,3,18	0/0:6,0:6:8:0,8,54	0/0:10,0:10:0.82:0,1,36	0/1:2,1:3:8.96:43,0,9	0/0:11,0:11:26.12:0,26,164	0/0:9,0:9:26.44:0,26,170	0/0:10,0:10:13.48:0,13,65	0/0:8,0:8:23.74:0,24,160
chr10	57040072	.	TCCCC	T	240.19	PASS	AB=1.000;AC=17;AF=0.354;AN=48;BaseQRankSum=0.495;DP=195;FS=11.553;HRun=16;HaplotypeScore=188.8924;InbreedingCoeff=0.3452;MQ=28.87;MQ0=0;MQRankSum=-0.919;QD=3.87;ReadPosRankSum=1.485;VQSLOD=-0.2704;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:6,0:6:0:0,0,0	./.	./.	0/0:7,0:7:1.55:0,2,4	1/1:6,1:7:2.92:39,3,0	1/1:11,0:11:2.75:39,3,0	0/0:9,0:9:0:0,0,0	0/0:4,0:4:0:0,0,0	0/0:25,0:25:0:0,0,1	0/1:13,0:13:0.01:0,0,0	1/1:3,3:6:2.93:39,3,0	0/0:6,0:6:5.91:0,6,39	0/0:2,0:2:3.01:0,3,39	0/0:13,0:13:0:0,0,0	1/1:3,1:5:5.97:63,6,0	0/0:5,0:5:0:0,0,0	1/1:1,0:1:3.01:39,3,0	0/0:3,0:3:0:0,0,0	./.	0/0:2,0:2:0:0,0,0	1/1:5,0:6:2.42:9,2,0	1/1:7,3:10:2.91:29,3,0	1/1:2,1:3:5.99:74,6,0	0/0:11,0:11:0:0,0,0	0/0:9,0:9:0:0,0,0	0/0:10,0:10:0:0,0,0	0/0:8,0:8:0:0,0,0
chr10	57043937	.	C	CAGAGAGAGAGAG	1683.25	PASS	AC=18;AF=0.360;AN=50;BaseQRankSum=2.176;DP=336;FS=21.176;HRun=0;HaplotypeScore=126.3118;InbreedingCoeff=0.7229;MQ=39.21;MQ0=45;MQRankSum=-5.581;QD=17.72;ReadPosRankSum=-2.670;VQSLOD=-0.0411;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:25:42.04:0,42,1085	0/0:12,0:11:9.01:0,9,137	./.	./.	0/0:20,0:17:18.04:0,18,419	0/0:17,0:16:24.07:0,24,665	0/0:20,0:19:23.76:0,24,495	1/1:24,0:9:12.89:170,13,0	1/1:10,0:10:12.04:421,12,0	1/1:14,0:11:19.27:388,19,0	0/0:6,4:12:2.68:0,3,11	0/0:15,0:12:15.05:0,15,401	0/0:17,0:15:24.07:0,24,767	0/0:12,0:9:15.05:0,15,466	1/1:5,0:5:3.01:128,3,0	0/0:7,0:7:15.05:0,15,414	0/0:14,0:14:24.08:0,24,533	0/0:7,0:6:9.47:0,9,166	./.	1/1:6,0:5:3.01:100,3,0	0/0:4,0:2:3.01:0,3,71	0/0:21,0:21:11.82:0,12,332	0/0:10,0:10:12.04:0,12,340	0/0:13,0:13:6.33:0,6,194	1/1:10,0:8:1.55:4,2,0	1/1:13,0:8:3.01:157,3,0	1/1:11,0:10:15:445,15,0	1/1:2,0:1:3.01:38,3,0
chr10	57044691	.	CTTATA	C	674.24	PASS	AB=1.000;AC=9;AF=0.188;AN=48;BaseQRankSum=3.434;DP=348;FS=0.000;HRun=0;HaplotypeScore=73.2957;InbreedingCoeff=0.5676;MQ=87.55;MQ0=8;MQRankSum=0.149;QD=6.68;ReadPosRankSum=0.074;VQSLOD=1.7240;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:21.07:0,21,592	1/1:3,0:8:6.02:70,6,0	0/1:23,0:16:0:0,0,0	0/0:58,0:20:3.97:0,4,9	0/0:9,0:9:12.04:0,12,338	0/0:10,0:10:21.07:0,21,587	./.	1/1:33,0:44:13.23:33,13,0	0/0:9,0:14:12.04:0,12,246	0/0:8,0:8:9.03:0,9,113	0/0:7,0:7:3.01:0,3,61	0/0:11,0:11:9.03:0,9,254	./.	./.	0/0:6,0:8:3.01:0,3,57	0/0:9,0:9:15.05:0,15,354	1/1:5,10:15:21.07:381,21,0	1/1:4,7:11:18.06:327,18,0	0/0:6,0:10:18.06:0,18,320	0/0:10,0:10:6.02:0,6,102	0/0:5,0:5:3.01:0,3,52	./.	0/0:8,0:8:3.01:0,3,84	0/0:6,0:6:6.02:0,6,169	0/0:8,0:13:12.04:0,12,231	0/0:3,0:5:6.02:0,6,152	0/0:9,0:9:3.01:0,3,50	0/0:7,0:9:3.01:0,3,65
chr10	57045311	.	AAAC	A	10505.76	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=12.900;DP=758;FS=3.430;HRun=0;HaplotypeScore=144.3548;InbreedingCoeff=0.9646;MQ=91.80;MQ0=0;MQRankSum=-3.330;QD=44.52;ReadPosRankSum=4.905;VQSLOD=6.7012;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:66.20:0,66,1510	0/0:15,0:15:39.12:0,39,877	0/0:36,0:36:99:0,105,2293	0/0:27,0:27:78.27:0,78,1717	0/0:29,0:29:84.29:0,84,1986	1/1:2,21:23:54.18:951,54,0	1/1:0,34:34:92.90:1598,93,0	0/0:43,0:43:99:0,123,2894	0/0:26,0:26:78.26:0,78,1800	0/0:33,0:33:99:0,99,2329	0/0:19,0:19:51.18:0,51,1193	1/1:0,38:38:96.33:1693,96,0	0/0:23,0:23:69.24:0,69,1631	0/0:26,0:26:75.26:0,75,1771	0/0:34,0:34:99:0,99,2341	1/1:1,23:24:1.27:1146,1,0	1/1:0,26:26:66.23:1164,66,0	1/1:3,27:30:75.26:1323,75,0	0/0:23,0:23:69.23:0,69,1542	0/0:27,0:27:78.27:0,78,1845	0/0:33,0:33:99:0,99,2307	1/1:2,18:20:51.17:885,51,0	1/1:0,18:18:42.01:740,42,0	1/1:0,23:23:57.20:1004,57,0	0/0:22,0:22:66.23:0,66,1537	0/0:31,0:31:93.32:0,93,2196	0/0:29,0:29:84.29:0,84,1963	0/0:22,0:22:63.22:0,63,1490
chr10	57046078	.	TG	T	13061.23	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=7.367;DP=698;FS=0.724;HRun=8;HaplotypeScore=90.9992;InbreedingCoeff=0.9987;MQ=88.65;MQ0=0;MQRankSum=-5.692;QD=24.51;ReadPosRankSum=3.597;VQSLOD=5.2583;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,1:36:67.28:0,67,1056	1/1:2,10:12:30.05:290,30,0	0/0:22,0:22:54.13:0,54,617	0/0:27,0:28:37.74:0,38,600	0/0:30,0:30:75.18:0,75,865	1/1:0,19:19:57.09:550,57,0	1/1:3,30:33:81.12:782,81,0	1/1:2,26:28:78.10:742,78,0	1/1:2,20:22:54.09:521,54,0	1/1:1,21:22:63.10:608,63,0	1/1:2,14:16:35.59:347,36,0	1/1:1,29:30:84.13:811,84,0	0/0:26,0:26:72.22:0,72,869	0/0:23,0:23:60.17:0,60,712	1/1:1,38:39:99:985,102,0	1/1:1,23:24:63.10:608,63,0	1/1:7,26:33:69.10:666,69,0	1/1:2,28:30:84.13:811,84,0	1/1:1,24:25:66.09:632,66,0	1/1:6,18:24:48.07:463,48,0	1/1:6,40:46:99:1072,111,0	1/1:5,20:25:60.09:579,60,0	1/1:1,12:13:33.02:310,33,0	1/1:3,20:23:60.10:579,60,0	1/1:3,15:18:45.07:435,45,0	1/1:3,18:21:20.85:485,21,0	1/1:1,19:20:54.09:521,54,0	1/1:1,9:10:27.04:261,27,0
chr10	57047176	.	T	TC	9295.44	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-15.299;DP=806;FS=10.640;HRun=6;HaplotypeScore=77.8379;InbreedingCoeff=0.9988;MQ=82.58;MQ0=0;MQRankSum=-1.082;QD=29.99;ReadPosRankSum=2.507;VQSLOD=5.0534;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,99,995	1/1:1,13:14:33.10:410,33,0	0/0:22,0:22:33.41:0,33,450	0/0:29,0:28:53.77:0,54,487	0/0:30,0:30:84.19:0,84,857	1/1:1,23:24:66.21:830,66,0	1/1:1,31:32:78.25:981,78,0	1/1:6,28:35:78.16:897,78,0	0/0:32,0:32:75.15:0,75,764	0/0:20,0:20:57.13:0,57,582	0/0:16,0:16:39.07:0,39,392	1/1:2,20:22:54.17:676,54,0	0/0:31,0:31:81.16:0,81,819	0/0:23,0:23:63.14:0,63,641	0/0:52,0:52:99:0,144,1454	1/1:2,37:39:96.31:1208,96,0	1/1:1,16:17:45.14:566,45,0	1/1:3,22:25:54.17:678,54,0	0/0:23,0:23:57.11:0,57,575	0/0:36,0:35:93.18:0,93,935	0/0:41,0:41:99:0,111,1125	1/1:1,29:30:75.24:942,75,0	1/1:4,26:30:78.25:974,78,0	1/1:3,39:42:90.29:1132,90,0	0/0:23,0:23:56.61:0,57,559	0/0:42,0:42:99:0,110,1101	0/0:34,0:34:87.19:0,87,886	0/0:6,0:6:18.04:0,18,183
chr10	57048025	.	A	AG	915.29	PASS	AB=0.863;AC=11;AF=0.196;AN=56;BaseQRankSum=7.226;DP=615;FS=39.862;HRun=0;HaplotypeScore=99.9257;InbreedingCoeff=-0.2423;MQ=45.63;MQ0=16;MQRankSum=-0.683;QD=3.62;ReadPosRankSum=5.507;VQSLOD=1.2381;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:42:90.04:0,90,630	0/1:14,0:13:54.89:55,0,103	0/0:19,0:4:11.64:0,12,73	0/0:18,0:10:26.74:0,27,218	0/0:30,0:29:60.10:0,60,415	0/1:16,7:21:58.13:88,0,58	0/1:17,5:21:26.68:118,0,27	0/1:32,0:31:99:246,0,136	0/0:14,0:13:28.98:0,29,185	0/0:18,0:16:17.31:0,17,259	0/0:13,0:13:29.37:0,29,164	0/1:13,13:25:60.81:64,0,61	0/0:17,0:16:44.71:0,45,363	0/0:22,0:22:52.55:0,53,369	0/0:18,0:18:43.67:0,44,287	0/1:33,0:33:99:135,0,180	0/1:21,0:17:79.24:101,0,79	0/1:12,0:15:45.86:46,0,88	0/0:21,0:21:18.20:0,18,332	0/0:32,0:32:33.13:0,33,430	0/0:19,0:16:22.41:0,22,141	0/1:13,0:22:52.20:116,0,52	0/1:20,0:19:32.62:33,0,70	0/1:16,0:21:15.87:61,0,16	0/0:13,0:14:29.16:0,29,186	0/0:19,0:19:27.90:0,28,307	0/0:31,0:28:62.17:0,62,385	0/0:13,0:12:23.37:0,23,148
chr10	57048029	.	A	AAG	2549.45	PASS	AB=0.861;AC=17;AF=0.304;AN=56;BaseQRankSum=4.478;DP=568;FS=9.759;HRun=0;HaplotypeScore=108.1143;InbreedingCoeff=0.6071;MQ=50.77;MQ0=10;MQRankSum=-0.227;QD=10.49;ReadPosRankSum=2.065;VQSLOD=3.0566;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:45:34.09:0,34,428	0/1:12,0:13:53.34:109,0,53	0/0:19,0:4:5.23:0,5,55	0/0:20,0:12:28.55:0,29,206	0/0:28,0:27:40.41:0,40,283	0/1:14,2:19:4.66:257,0,5	1/1:11,4:19:24.85:338,25,0	0/1:36,0:35:42.53:312,0,43	0/0:12,0:11:20.65:0,21,169	0/0:17,0:15:38.55:0,39,323	0/0:10,0:10:13.06:0,13,98	0/1:23,3:25:0.44:192,0,0	0/0:17,0:16:37.91:0,38,285	0/0:21,0:21:38.76:0,39,282	0/0:16,0:16:9.21:0,9,183	1/1:27,2:31:10.56:331,11,0	1/1:15,2:17:16.70:238,17,0	0/1:13,1:17:29.48:149,0,29	0/0:20,0:20:34.54:0,35,315	0/0:18,0:18:47.90:0,48,367	0/0:18,0:16:23.24:0,23,155	1/1:10,3:16:38.19:324,38,0	1/1:4,15:19:23.47:250,23,0	1/1:15,6:21:25.03:242,25,0	0/0:15,0:15:27.93:0,28,219	0/0:15,0:15:35.47:0,35,259	0/0:22,0:20:36.16:0,36,234	0/0:11,0:11:17.08:0,17,114
chr10	57049350	.	A	AGTAAACCCTTTAC	6179.27	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-2.496;DP=698;FS=6.075;HRun=0;HaplotypeScore=258.9570;InbreedingCoeff=0.9957;MQ=82.65;MQ0=0;MQRankSum=-9.792;QD=147.13;ReadPosRankSum=-3.570;VQSLOD=3.2086;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,108,4356	1/1:2,5:7:18.06:970,18,0	0/0:24,0:24:72.25:0,72,2579	0/0:16,0:16:48.16:0,48,1528	0/0:19,0:19:57.20:0,57,2242	0/0:20,0:20:60.18:0,60,2296	0/0:31,0:31:90.31:0,90,3729	1/1:27,4:33:96.32:5210,96,0	0/0:31,0:31:90.31:0,90,3584	0/0:16,0:16:48.16:0,48,1935	0/0:15,0:15:45.15:0,45,1738	0/0:31,0:31:93.29:0,93,3592	0/0:40,0:40:99:0,120,4843	0/0:25,0:25:75.26:0,75,2919	0/0:51,0:51:99:0,154,5656	0/0:49,0:49:99:0,141,5474	0/0:31,0:31:90.31:0,90,3712	0/0:15,0:15:45.15:0,45,1701	0/0:20,0:20:54.16:0,54,1962	0/0:17,0:17:51.18:0,51,2087	0/0:37,0:37:99:0,108,4176	0/0:19,0:19:54.19:0,54,2175	0/0:14,0:14:39.12:0,39,1400	0/0:35,0:34:99:0,105,4203	0/0:16,0:16:48.16:0,48,1839	0/0:23,0:23:69.24:0,69,2815	0/0:12,0:12:36.12:0,36,1329	0/0:13,0:13:39.13:0,39,1500
chr10	57049652	.	G	GTTT	5966.97	PASS	AB=0.625;AC=39;AF=0.696;AN=56;BaseQRankSum=-0.078;DP=669;FS=7.974;HRun=16;HaplotypeScore=119.4570;InbreedingCoeff=0.6518;MQ=68.86;MQ0=2;MQRankSum=-1.756;QD=11.82;ReadPosRankSum=-2.697;VQSLOD=1.3080;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:30:32.14:0,32,345	0/0:7,0:11:14.62:0,15,139	0/0:42,0:28:27.41:0,27,213	0/0:22,0:13:2.04:0,2,8	0/0:15,0:20:7.07:0,7,202	1/1:8,17:29:45.12:689,45,0	1/1:5,4:19:31.53:382,32,0	0/1:21,0:44:73.22:111,0,73	1/1:8,0:25:9.32:182,9,0	1/1:16,0:23:25.15:199,25,0	0/1:10,0:23:17.74:157,0,18	1/1:12,2:22:33.01:389,33,0	0/0:15,0:16:29.22:0,29,268	0/0:19,0:22:27.07:0,27,230	0/1:9,1:33:6.17:221,0,6	1/1:7,8:21:33.08:498,33,0	1/1:7,10:22:34.61:481,35,0	1/1:7,12:22:8.98:118,9,0	1/1:21,0:25:26.97:231,27,0	1/1:9,1:32:5.87:381,6,0	1/1:2,1:12:14.95:140,15,0	1/1:8,10:21:32.65:404,33,0	1/1:14,10:28:6.33:278,6,0	1/1:8,7:21:22.50:342,23,0	1/1:6,1:20:20.82:163,21,0	1/1:19,1:28:31.14:242,31,0	1/1:7,3:24:29.73:289,30,0	1/1:2,0:9:10.21:71,10,0
chr10	57050807	.	AGAACC	A	522.69	PASS	AB=0.957;AC=11;AF=0.196;AN=56;BaseQRankSum=5.295;DP=419;FS=23.562;HRun=0;HaplotypeScore=96.1205;InbreedingCoeff=-0.1478;MQ=34.78;MQ0=47;MQRankSum=-4.949;QD=4.22;ReadPosRankSum=-2.507;VQSLOD=0.0060;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:23:54.62:0,55,1107	0/0:11,0:10:17.96:0,18,294	0/0:23,0:2:2.92:0,3,30	0/0:21,0:2:2.63:0,3,14	0/0:23,0:23:45.21:0,45,931	0/1:10,0:10:99:106,0,226	0/1:11,0:9:99:133,0,129	0/0:24,0:22:53.83:0,54,1135	0/0:5,0:5:15.05:0,15,286	0/0:17,0:13:6.82:0,7,605	0/0:9,0:8:21.06:0,21,349	0/1:12,1:12:85.31:85,0,291	0/0:21,0:19:45.71:0,46,687	0/0:12,0:11:24.03:0,24,372	0/0:15,0:12:30.10:0,30,577	0/1:13,0:10:39.31:39,0,307	0/1:20,1:16:11.86:12,0,284	0/1:12,1:10:40.27:40,0,292	0/0:13,0:11:1.21:0,1,510	0/0:11,0:9:20.99:0,21,389	1/1:7,0:4:2.13:5,2,0	0/1:16,0:13:22.48:22,0,426	0/1:6,2:8:60.27:160,0,60	0/1:12,0:7:58.49:58,0,179	0/0:14,0:12:28.68:0,29,405	0/0:17,0:14:36.73:0,37,537	0/0:19,0:16:41.90:0,42,811	0/0:7,0:5:12.04:0,12,287
chr10	57050828	.	AACCC	A	2124.70	PASS	AB=0.954;AC=25;AF=0.463;AN=54;BaseQRankSum=4.325;DP=503;FS=3.131;HRun=0;HaplotypeScore=114.4115;InbreedingCoeff=-0.1194;MQ=37.23;MQ0=52;MQRankSum=-5.507;QD=8.53;ReadPosRankSum=-1.592;VQSLOD=2.4149;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:30:65.88:0,66,1280	0/1:8,0:8:4.73:5,0,126	0/0:85,0:8:13.39:0,13,112	0/0:68,0:9:14.82:0,15,138	0/0:19,0:19:51.16:0,51,919	0/1:14,1:13:99:109,0,180	0/1:10,0:8:1.85:2,0,179	0/0:25,0:22:39.76:0,40,675	./.	0/1:20,0:14:63.88:95,0,64	1/1:7,0:5:9.03:145,9,0	0/1:12,0:10:90.42:90,0,259	0/0:15,0:14:36.12:0,36,663	0/0:10,0:9:21.07:0,21,387	1/1:8,6:10:19.87:263,20,0	0/1:8,2:9:99:125,0,121	0/1:18,1:15:61.63:62,0,193	0/1:8,0:8:16.78:17,0,289	0/1:19,0:13:99:155,0,103	0/1:14,0:12:14.82:171,0,15	1/1:3,0:3:2.94:18,3,0	0/1:7,1:6:56.71:57,0,115	0/1:15,2:17:99:150,0,247	0/1:8,0:4:39.90:40,0,50	1/1:16,1:15:21.62:330,22,0	0/1:9,3:10:23.74:309,0,24	1/1:18,1:14:11.14:99,11,0	0/1:9,0:9:54.71:55,0,170
chr10	57050829	.	ACCC	A	1843.32	PASS	AB=0.866;AC=23;AF=0.426;AN=54;BaseQRankSum=4.588;DP=489;FS=1.066;HRun=3;HaplotypeScore=108.1847;InbreedingCoeff=-0.1910;MQ=37.46;MQ0=52;MQRankSum=-5.745;QD=7.88;ReadPosRankSum=-1.737;VQSLOD=-0.6282;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:29:65.94:0,66,1173	0/1:8,0:8:4.75:5,0,113	0/0:84,0:8:13.21:0,13,102	0/0:69,0:9:14.84:0,15,131	0/0:18,0:18:51.09:0,51,839	0/1:13,2:13:96.89:97,0,162	0/1:8,0:8:2.40:2,0,163	0/0:23,0:20:40.04:0,40,659	./.	0/1:10,5:14:83.27:89,0,83	1/1:2,3:3:9.03:134,9,0	0/1:8,3:10:78.62:79,0,201	0/0:15,0:14:36.12:0,36,598	0/0:10,0:9:21.07:0,21,343	1/1:10,2:10:14.51:206,15,0	0/1:8,2:9:99:119,0,121	0/1:15,0:16:33.70:34,0,170	0/1:7,1:8:31.06:31,0,266	0/1:12,2:11:99:137,0,112	0/1:5,3:10:25.82:157,0,26	0/0:2,0:4:3.02:0,3,8	0/1:6,1:5:44.72:45,0,97	0/1:17,1:18:99:110,0,214	0/1:8,0:4:37.67:38,0,47	1/1:8,5:14:3.42:288,3,0	0/1:7,5:10:23.02:285,0,23	1/1:6,3:12:2.75:102,3,0	0/1:5,1:7:50.34:50,0,151
chr10	57050832	.	C	CCA	1287.39	PASS	AB=0.972;AC=24;AF=0.444;AN=54;BaseQRankSum=3.833;DP=512;FS=3.145;HRun=0;HaplotypeScore=119.2606;InbreedingCoeff=0.1034;MQ=39.37;MQ0=49;MQRankSum=-5.400;QD=5.43;ReadPosRankSum=-0.081;VQSLOD=2.8190;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:30:66.07:0,66,940	0/0:8,0:8:13.27:0,13,77	0/0:86,0:9:4.78:0,5,44	0/0:70,0:10:7.15:0,7,86	0/0:18,0:19:49.66:0,50,609	0/1:13,2:13:8.25:207,0,8	1/1:12,0:10:11.35:207,11,0	0/0:27,0:24:18.90:0,19,341	./.	0/1:22,0:14:20.27:20,0,65	0/0:5,0:3:4.35:0,4,16	0/1:13,1:12:1.30:102,0,1	0/0:18,0:17:38.97:0,39,487	0/0:10,0:9:21.01:0,21,250	0/1:13,0:10:3.49:52,0,3	0/1:10,0:9:10.46:49,0,10	1/1:18,2:17:15.67:191,16,0	0/1:9,0:10:38.32:69,0,38	0/1:15,0:10:22.03:22,0,88	0/1:12,0:12:16.79:17,0,83	1/1:3,0:3:2.61:14,3,0	1/1:7,0:6:7.46:104,7,0	1/1:16,2:19:16.48:249,16,0	1/1:8,0:5:11.70:86,12,0	0/1:15,0:14:28.38:28,0,60	0/1:12,0:10:1.54:2,0,51	0/1:19,0:14:20.49:20,0,36	0/1:8,0:7:20.40:20,0,132
chr10	57050840	.	ACAAC	A	1512.43	PASS	AB=0.906;AC=18;AF=0.321;AN=56;BaseQRankSum=4.696;DP=471;FS=0.000;HRun=0;HaplotypeScore=119.4000;InbreedingCoeff=0.0340;MQ=41.61;MQ0=30;MQRankSum=-2.861;QD=5.86;ReadPosRankSum=-5.097;VQSLOD=0.3895;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:53.87:0,54,1333	0/1:8,0:8:2.08:72,0,2	0/1:80,2:12:30.77:31,0,148	0/0:66,0:10:7.21:0,7,116	0/0:18,0:18:49.85:0,50,763	0/0:15,0:13:17.82:0,18,186	0/0:12,0:11:1.93:0,2,201	1/1:23,0:22:24.89:223,25,0	0/0:1,0:1:3.01:0,3,31	0/1:13,2:11:47.91:184,0,48	0/1:4,0:3:8.44:9,0,8	0/0:13,0:12:25.76:0,26,238	0/0:17,0:17:44.95:0,45,711	0/0:11,0:10:20.55:0,21,360	1/1:10,1:9:13.59:154,14,0	0/0:9,0:8:2.77:0,3,75	0/1:21,0:19:31.96:32,0,127	0/0:10,0:9:13.80:0,14,119	0/1:13,2:11:85.23:174,0,85	0/1:5,1:9:29.13:136,0,29	0/0:2,0:2:0.47:0,0,1	0/0:8,0:7:5.25:0,5,70	0/1:17,0:17:12.47:12,0,178	0/1:5,0:5:8.48:8,0,56	1/1:9,2:12:14.90:260,15,0	0/1:9,1:11:24.41:127,0,24	0/1:9,1:11:0.58:142,0,1	0/1:6,1:7:77.86:112,0,78
chr10	57050841	.	CAACAAAAAAAAAAAAACA	C	1168.40	PASS	AB=1.000;AC=12;AF=0.214;AN=56;BaseQRankSum=0.007;DP=468;FS=1.254;HRun=0;HaplotypeScore=200.5302;InbreedingCoeff=0.1241;MQ=41.71;MQ0=28;MQRankSum=0.840;QD=9.82;ReadPosRankSum=-5.172;VQSLOD=0.8318;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:63.47:0,63,4471	1/1:8,0:8:14.97:377,15,0	0/0:81,0:12:0.10:0,0,206	0/0:67,0:10:13.23:0,13,205	0/0:17,0:17:48.15:0,48,2881	0/0:11,0:13:33.11:0,33,1376	0/0:11,0:12:36.12:0,36,1257	1/1:2,21:22:62.87:815,63,0	0/1:2,0:2:18.02:18,0,39	0/0:16,0:11:1.18:0,1,78	0/0:5,0:4:4.51:0,5,46	0/0:13,0:14:39.13:0,39,1559	0/0:17,0:17:45.09:0,45,2554	0/0:10,0:10:24.01:0,24,1285	0/1:10,0:9:11.30:11,0,28	0/0:8,0:8:18.06:0,18,762	0/0:23,0:20:16.65:0,17,944	0/0:9,0:9:27.05:0,27,920	0/1:15,0:11:47.30:47,0,249	0/1:9,0:9:8.80:9,0,121	0/0:2,0:2:0.47:0,0,1	0/0:7,0:7:17.89:0,18,520	0/1:16,0:16:1.88:2,0,981	0/0:5,0:5:12.51:0,13,437	0/1:12,0:12:14.82:15,0,68	0/1:11,0:11:11.13:11,0,84	0/1:13,0:11:12.71:13,0,53	0/0:7,0:6:12.07:0,12,286
chr10	57050855	.	A	ACCCCCCC	3178.08	PASS	AB=0.952;AC=14;AF=0.259;AN=54;BaseQRankSum=3.090;DP=408;FS=8.325;HRun=0;HaplotypeScore=140.7316;InbreedingCoeff=0.4047;MQ=49.40;MQ0=12;MQRankSum=-6.445;QD=43.54;ReadPosRankSum=-1.047;VQSLOD=2.5242;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:78.27:0,78,2015	0/0:7,0:7:11.97:0,12,202	0/0:55,0:13:30.09:0,30,530	0/0:49,0:9:11.95:0,12,144	0/0:24,0:24:63.20:0,63,1531	0/0:12,0:12:33.01:0,33,636	0/0:13,0:13:33.11:0,33,672	0/0:22,0:21:32.54:0,33,656	0/1:2,0:2:33.78:62,0,34	1/1:8,0:6:15.05:436,15,0	1/1:5,0:5:10.37:209,10,0	0/0:16,0:16:42.09:0,42,769	0/0:17,0:17:45.15:0,45,1139	0/0:9,0:9:21.07:0,21,566	0/1:6,0:5:8.77:94,0,9	0/0:8,0:7:15.05:0,15,319	0/0:29,0:27:30.01:0,30,623	0/0:10,0:9:27.09:0,27,585	0/1:11,1:10:99:439,0,157	0/1:7,1:8:63.58:455,0,64	./.	0/0:9,0:9:24.08:0,24,428	0/0:15,0:15:33.56:0,34,556	0/0:9,0:8:12.04:0,12,267	1/1:7,1:8:21.06:496,21,0	1/1:8,1:9:23.37:487,23,0	0/1:8,0:8:40.84:421,0,41	0/1:6,0:5:99:255,0,128
chr10	57050858	.	C	CCCCCCCAA	6290.26	PASS	AB=0.728;AC=17;AF=0.304;AN=56;BaseQRankSum=-3.375;DP=395;FS=0.535;HRun=0;HaplotypeScore=138.7249;InbreedingCoeff=0.5050;MQ=51.26;MQ0=8;MQRankSum=-6.808;QD=73.14;ReadPosRankSum=-2.156;VQSLOD=4.7019;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:78.27:0,78,1985	0/0:1,0:7:11.84:0,12,135	0/0:44,0:14:29.71:0,30,468	0/0:38,0:8:8.95:0,9,133	0/0:23,0:23:63.15:0,63,1424	0/0:7,0:13:32.16:0,32,314	0/0:6,0:14:27.38:0,27,274	0/0:22,0:21:31:0,31,517	0/1:1,1:2:19.48:120,0,19	1/1:8,4:10:27.56:1022,28,0	1/1:4,1:8:20.94:487,21,0	0/0:10,0:17:37.40:0,37,505	0/0:17,0:17:45.15:0,45,1143	0/0:9,0:9:24.07:0,24,577	1/1:3,1:4:12.02:392,12,0	0/0:4,0:7:11.84:0,12,150	0/0:9,0:27:24.29:0,24,335	0/0:3,0:10:25.63:0,26,204	0/1:11,4:14:99:917,0,99	0/1:7,4:11:43.41:746,0,43	1/1:1,0:1:0.47:1,0,0	0/0:2,0:9:23.92:0,24,211	0/0:4,0:12:26.36:0,26,299	0/0:3,0:8:11.92:0,12,154	1/1:2,4:7:15.52:610,16,0	1/1:6,3:9:24.03:798,24,0	0/1:8,2:11:18.59:816,0,19	0/1:3,3:5:99:382,0,100
chr10	57052028	.	C	CAAA	828.68	PASS	AB=0.974;AC=10;AF=0.179;AN=56;BaseQRankSum=12.090;DP=586;FS=0.000;HRun=2;HaplotypeScore=137.1058;InbreedingCoeff=0.0249;MQ=80.21;MQ0=1;MQRankSum=-7.401;QD=4.90;ReadPosRankSum=1.822;VQSLOD=-0.7001;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:75.22:0,75,1170	0/0:13,0:13:33:0,33,373	0/0:18,0:18:37.64:0,38,477	0/0:18,0:17:31.53:0,32,460	0/0:31,0:32:84.20:0,84,1401	0/1:21,0:21:99:143,0,193	0/1:21,0:21:62.33:62,0,282	0/0:40,0:41:99:0,102,1353	0/0:21,0:21:41.75:0,42,491	0/0:24,0:24:63.13:0,63,782	0/0:27,0:27:77.83:0,78,926	0/1:15,2:17:99:116,0,104	0/0:15,0:15:42.14:0,42,698	0/0:13,0:13:33.05:0,33,540	0/0:22,0:22:60.15:0,60,768	0/1:30,0:30:99:184,0,171	0/1:19,0:19:30.12:130,0,30	1/1:10,0:10:21.97:120,22,0	0/0:16,0:16:38.67:0,39,429	0/0:29,0:29:75.10:0,75,902	0/0:13,0:13:30.09:0,30,382	0/1:14,0:14:54.83:55,0,81	0/1:20,0:20:71.33:71,0,121	0/1:15,2:17:48.04:99,0,48	0/0:12,0:12:33.08:0,33,389	0/0:28,0:28:81.03:0,81,960	0/0:32,0:32:78.83:0,79,1002	0/0:15,0:15:36.10:0,36,460
chr10	57052031	.	G	GA	8181.99	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-2.241;DP=596;FS=7.474;HRun=10;HaplotypeScore=85.5770;InbreedingCoeff=0.9487;MQ=79.99;MQ0=1;MQRankSum=-3.857;QD=17.45;ReadPosRankSum=-0.727;VQSLOD=4.7642;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,1:28:36.90:0,37,507	1/1:2,7:11:26.73:252,27,0	0/0:17,0:19:2.82:0,3,152	0/0:18,0:17:13.27:0,13,111	0/0:31,1:32:24.98:0,25,479	1/1:9,0:21:41.70:214,42,0	1/1:10,0:20:32.29:165,32,0	1/1:16,25:41:83.93:867,84,0	1/1:4,16:20:37.34:387,37,0	1/1:3,18:24:29.11:465,29,0	1/1:3,25:29:59.98:622,60,0	1/1:12,0:18:30.27:173,30,0	0/0:16,0:16:41.92:0,42,341	0/0:13,0:13:19.50:0,20,151	1/1:8,14:22:36.09:384,36,0	1/1:11,1:28:57.40:333,57,0	1/1:6,0:19:43.07:238,43,0	1/1:2,0:8:17.04:86,17,0	1/1:5,15:20:40.75:427,41,0	1/1:4,23:29:60.97:610,61,0	1/1:2,12:14:30.07:318,30,0	1/1:9,0:16:38.14:239,38,0	1/1:12,1:20:35.56:204,36,0	1/1:8,0:16:23.94:123,24,0	1/1:1,14:15:33.08:352,33,0	1/1:4,26:31:72.02:733,72,0	1/1:7,24:32:22.47:636,22,0	1/1:1,14:15:14.45:353,14,0
chr10	57052073	.	TA	T	2461.99	PASS	AB=0.538;AC=17;AF=0.304;AN=56;BaseQRankSum=5.789;DP=518;FS=1.309;HRun=10;HaplotypeScore=78.4534;InbreedingCoeff=0.9184;MQ=74.97;MQ0=1;MQRankSum=-4.250;QD=17.46;ReadPosRankSum=3.511;VQSLOD=4.3919;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:81.18:0,81,876	0/0:2,0:3:8.65:0,9,48	0/0:18,0:17:29.43:0,29,291	0/0:12,0:12:14.34:0,14,187	0/0:21,1:22:34.19:0,34,583	1/1:2,15:17:44.99:390,45,0	1/1:5,7:12:17.97:156,18,0	0/0:9,0:31:71.84:0,72,412	0/0:16,0:16:36.10:0,36,398	0/0:22,0:22:57.14:0,57,612	0/0:25,0:25:54.12:0,54,581	0/1:2,12:14:0.19:227,0,0	0/0:16,0:17:50.97:0,51,545	0/0:16,1:17:26.23:0,26,460	0/0:19,1:20:34.12:0,34,604	1/1:3,18:21:50.98:442,51,0	1/1:6,13:19:11.40:315,11,0	1/1:4,5:9:11.99:104,12,0	0/0:21,0:21:51.13:0,51,557	0/0:28,0:28:69.13:0,69,724	0/0:11,0:11:21.04:0,21,223	1/1:3,16:19:47.85:406,48,0	1/1:1,12:13:32.99:286,33,0	1/1:1,16:17:38.98:338,39,0	0/0:21,0:21:45.12:0,45,498	0/0:25,1:26:60.12:0,60,634	0/0:26,0:26:66.16:0,66,717	0/0:11,1:11:7.04:0,7,305
chr10	57053126	.	TGA	T	4023.78	PASS	AC=42;AF=0.778;AN=54;BaseQRankSum=1.197;DP=345;FS=1.881;HRun=0;HaplotypeScore=52.3829;InbreedingCoeff=0.7507;MQ=78.65;MQ0=1;MQRankSum=-0.603;QD=15.24;ReadPosRankSum=0.915;VQSLOD=3.3434;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:51.08:0,51,764	./.	0/0:11,0:10:26.92:0,27,306	0/0:12,0:12:7.11:0,7,190	0/0:11,0:11:29.87:0,30,380	1/1:9,2:11:25.81:224,26,0	1/1:16,2:18:34.40:271,34,0	1/1:10,0:10:23.55:185,24,0	1/1:0,10:11:21.06:301,21,0	1/1:0,3:8:14.95:137,15,0	1/1:3,0:3:2.72:26,3,0	1/1:17,2:20:27.67:186,28,0	0/0:14,0:14:32.70:0,33,473	0/0:13,0:13:32.83:0,33,509	1/1:1,7:13:26.80:320,27,0	1/1:10,1:11:15.85:93,16,0	1/1:24,4:28:16.81:147,17,0	1/1:22,3:25:19.42:176,19,0	1/1:0,10:11:30.02:347,30,0	1/1:1,0:2:3:27,3,0	1/1:6,27:36:42.13:620,42,0	1/1:7,0:7:2.48:10,2,0	1/1:3,0:3:2.60:10,3,0	1/1:13,0:13:2.71:89,3,0	1/1:1,6:7:3.01:45,3,0	1/1:1,13:15:42.03:529,42,0	1/1:3,6:9:18.06:257,18,0	1/1:2,0:2:2.99:24,3,0
chr10	57053127	.	GA	G	3641.42	PASS	AB=0.923;AC=43;AF=0.796;AN=54;BaseQRankSum=2.375;DP=309;FS=1.228;HRun=1;HaplotypeScore=47.6580;InbreedingCoeff=0.7221;MQ=80.62;MQ0=0;MQRankSum=-2.757;QD=15.30;ReadPosRankSum=1.784;VQSLOD=3.4181;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:50.05:0,50,594	./.	0/0:12,0:11:29.74:0,30,293	0/1:11,1:11:0.41:0,0,123	0/0:11,0:11:16.61:0,17,287	1/1:6,3:9:26.97:271,27,0	1/1:13,6:19:36.91:376,37,0	1/1:8,2:10:23.96:216,24,0	1/1:11,0:11:20.83:148,21,0	1/1:8,0:8:14.92:113,15,0	1/1:1,1:2:2.91:26,3,0	1/1:3,11:14:30:354,30,0	0/0:14,0:14:7.92:0,8,301	0/0:13,0:13:22.92:0,23,359	1/1:12,0:12:26.02:174,26,0	1/1:1,9:10:18.03:226,18,0	1/1:5,13:18:17.96:188,18,0	1/1:3,15:18:21.44:230,21,0	1/1:11,0:11:29.82:221,30,0	1/1:1,0:1:2.98:21,3,0	1/1:30,0:30:41.65:294,42,0	1/1:0,7:7:2.96:42,3,0	1/1:0,2:2:3.01:42,3,0	1/1:7,6:13:21.90:230,22,0	1/1:6,0:6:2.97:20,3,0	1/1:15,0:15:41.57:294,42,0	1/1:6,2:8:17.88:132,18,0	1/1:2,0:2:2.99:24,3,0
chr10	57054048	.	C	CTGTGTGTGTG	3417.40	PASS	AB=0.936;AC=25;AF=0.481;AN=52;BaseQRankSum=1.649;DP=437;FS=17.364;HRun=0;HaplotypeScore=108.1349;InbreedingCoeff=0.4163;MQ=52.33;MQ0=9;MQRankSum=-5.049;QD=17.09;ReadPosRankSum=2.422;VQSLOD=0.9387;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:40:57.12:0,57,1628	1/1:9,0:9:5.98:64,6,0	0/0:19,0:16:40.79:0,41,1029	0/0:22,0:16:45.10:0,45,1095	0/0:8,0:8:20.84:0,21,545	1/1:19,0:18:5.69:63,6,0	0/0:23,0:20:0.94:0,1,2	0/0:14,0:12:25.63:0,26,133	0/1:10,5:17:11.67:218,0,12	1/1:6,0:6:9.93:270,10,0	0/0:6,0:6:0.67:0,1,2	1/1:23,0:23:8.95:118,9,0	0/0:30,0:30:47.25:0,47,1760	0/0:23,0:23:54.15:0,54,1443	1/1:14,0:14:4.96:14,5,0	0/1:16,0:15:12.47:29,0,12	0/1:19,0:16:58.06:59,0,58	0/1:19,0:18:49.30:49,0,71	1/1:13,0:11:21.76:750,22,0	0/0:12,0:10:0.07:0,0,0	./.	1/1:9,0:9:3.01:39,3,0	0/1:8,0:7:24.53:41,0,25	0/0:18,0:17:2.99:0,3,24	./.	1/1:13,0:12:13.06:1024,13,0	1/1:8,0:8:12.04:348,12,0	1/1:5,0:4:12.04:332,12,0
chr10	57054050	.	C	CTGTGTGTG	5214.78	PASS	AB=0.714;AC=39;AF=0.696;AN=56;BaseQRankSum=4.105;DP=490;FS=9.584;HRun=0;HaplotypeScore=119.9838;InbreedingCoeff=0.6994;MQ=52.05;MQ0=7;MQRankSum=-8.064;QD=16.00;ReadPosRankSum=-1.529;VQSLOD=3.2563;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:41:41.23:0,41,1322	1/1:13,0:13:6.22:70,6,0	0/0:19,0:16:42.13:0,42,956	0/0:23,0:17:48:0,48,980	0/0:8,0:8:20.83:0,21,433	1/1:9,11:19:5.54:151,6,0	1/1:4,15:20:0.08:0,0,0	1/1:19,0:18:15.04:334,15,0	1/1:17,0:17:6.49:173,6,0	1/1:5,0:11:21.47:462,21,0	0/0:4,0:8:0.82:0,1,1	1/1:9,17:27:12.03:293,12,0	0/0:30,0:30:55.12:0,55,1300	0/0:21,0:21:23.74:0,24,1044	1/1:5,0:16:9.10:42,9,0	1/1:5,10:15:2.69:85,3,0	1/1:14,8:20:18.10:373,18,0	1/1:5,11:20:6.02:172,6,0	1/1:10,1:18:43.39:1173,43,0	0/1:9,1:13:0.02:1,0,0	1/1:3,0:12:8.15:24,8,0	1/1:10,1:11:3.01:96,3,0	1/1:7,0:6:6.87:165,7,0	1/1:11,9:20:0.47:1,0,0	0/0:6,0:12:0:0,0,0	1/1:7,0:16:38.08:976,38,0	1/1:9,0:9:14.41:326,14,0	1/1:5,0:4:12.04:299,12,0
chr10	57055785	.	CGT	C	1107.13	PASS	AB=0.892;AC=31;AF=0.705;AN=44;BaseQRankSum=5.917;DP=487;FS=1.993;HRun=0;HaplotypeScore=119.6027;InbreedingCoeff=0.0358;MQ=51.59;MQ0=16;MQRankSum=-6.486;QD=3.25;ReadPosRankSum=1.761;VQSLOD=2.3581;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:46,0:47:61.08:61,0,373	./.	./.	./.	0/0:17,0:17:2.30:0,2,195	1/1:17,3:20:6.02:65,6,0	1/1:18,6:24:8.10:70,8,0	./.	1/1:7,0:10:2.84:14,3,0	1/1:11,0:13:5.68:28,6,0	0/0:6,0:7:0:0,0,0	1/1:15,8:23:21.06:229,21,0	0/1:12,3:16:44.44:44,0,141	0/1:20,0:21:10.98:11,0,220	1/1:8,0:16:8.52:42,9,0	1/1:9,5:14:11.63:130,12,0	1/1:12,5:18:9.02:96,9,0	0/1:17,6:23:11.95:174,0,12	0/1:22,0:24:16.45:16,0,21	0/0:10,0:11:0:0,0,0	0/0:22,0:22:0:0,0,0	1/1:4,4:9:2.81:14,3,0	1/1:9,6:15:3.01:33,3,0	1/1:9,3:13:5.85:47,6,0	./.	1/1:15,0:23:22.38:107,22,0	1/1:7,0:10:8.52:42,9,0	./.
chr10	57055823	.	T	TGCGCGCGC	3924.62	PASS	AB=0.898;AC=32;AF=0.615;AN=52;BaseQRankSum=4.777;DP=376;FS=28.127;HRun=0;HaplotypeScore=134.3183;InbreedingCoeff=0.5569;MQ=54.68;MQ0=14;MQRankSum=-6.564;QD=18.96;ReadPosRankSum=-0.784;VQSLOD=0.9150;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:86.02:0,86,2096	./.	0/0:16,0:3:6:0,6,93	0/0:18,0:9:13.11:0,13,290	0/0:20,0:20:42.03:0,42,1116	0/1:7,0:7:0.83:85,0,1	1/1:18,0:18:16.49:419,16,0	1/1:18,0:13:11.71:185,12,0	1/1:6,0:6:6.02:101,6,0	1/1:10,0:10:20.34:462,20,0	1/1:4,0:4:5.75:163,6,0	1/1:17,0:17:2.14:79,2,0	0/0:15,0:15:36.11:0,36,801	0/0:22,0:22:51.06:0,51,1220	1/1:13,0:13:1.80:51,2,0	0/1:8,0:8:6.94:7,0,8	1/1:15,0:15:11.91:235,12,0	1/1:19,2:21:43.18:707,43,0	1/1:15,0:14:19.12:422,19,0	1/1:6,0:5:6.01:134,6,0	0/0:11,12:24:0:0,0,1	1/1:7,0:7:5.87:49,6,0	0/0:7,0:7:2.04:0,2,6	0/1:5,10:16:0.55:1,0,2	./.	1/1:18,0:18:11.73:723,12,0	0/1:6,0:6:2.89:52,0,3	1/1:2,0:2:3.01:51,3,0
chr10	57055979	.	C	CT	1751.18	PASS	AB=0.935;AC=44;AF=0.786;AN=56;BaseQRankSum=-1.406;DP=344;FS=0.971;HRun=11;HaplotypeScore=190.9341;InbreedingCoeff=0.0779;MQ=54.78;MQ0=0;MQRankSum=0.532;QD=5.27;ReadPosRankSum=1.153;VQSLOD=0.1479;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:12,1:13:12.16:76,0,12	1/1:8,0:8:15.96:76,16,0	0/0:7,0:7:3.58:0,4,10	0/0:5,0:5:2.59:0,3,10	0/1:16,2:18:31.12:31,0,67	1/1:3,0:3:2.37:8,2,0	1/1:10,0:10:8.60:39,9,0	1/1:26,0:26:38.51:178,39,0	0/1:11,0:11:4.94:23,0,5	1/1:15,4:20:16.07:112,16,0	1/1:11,4:16:13.29:97,13,0	1/1:13,0:13:9.03:30,9,0	0/1:12,0:12:16.18:16,0,17	0/1:14,1:15:9.57:40,0,10	1/1:3,4:7:3.48:32,3,0	1/1:7,1:8:10.96:67,11,0	1/1:13,0:13:19.60:79,20,0	1/1:5,0:5:5.19:20,5,0	1/1:6,3:9:9.02:88,9,0	0/1:12,7:20:10.06:98,0,10	0/1:12,0:12:5.78:41,0,6	1/1:20,0:20:39.99:183,40,0	1/1:13,0:13:11.83:43,12,0	1/1:16,0:15:12.16:44,12,0	1/1:14,5:19:20.93:179,21,0	1/1:8,7:15:23.46:189,23,0	0/1:4,0:4:0:0,0,0	1/1:3,3:6:11.51:98,12,0
chr10	57056234	.	ATC	A	2284.84	PASS	AB=0.679;AC=39;AF=0.750;AN=52;BaseQRankSum=3.183;DP=162;FS=0.000;HRun=0;HaplotypeScore=23.5453;InbreedingCoeff=0.5116;MQ=51.11;MQ0=0;MQRankSum=0.864;QD=20.58;ReadPosRankSum=1.770;VQSLOD=3.4399;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:11,0:11:4.01:4,0,82	1/1:1,0:1:3:29,3,0	0/0:5,0:2:3.01:0,3,58	./.	0/0:10,0:10:14.96:0,15,161	1/1:0,5:5:12.04:175,12,0	1/1:2,12:14:30.86:327,31,0	1/1:2,1:3:7.19:42,7,0	1/1:0,4:4:8.77:51,9,0	1/1:0,2:3:6.02:89,6,0	1/1:0,0:5:7.43:52,7,0	1/1:0,3:4:2.73:13,3,0	0/0:9,0:9:20.92:0,21,285	0/0:6,0:6:15.08:0,15,111	1/1:0,8:8:21.07:309,21,0	1/1:1,2:5:15.04:188,15,0	1/1:0,0:8:14.94:130,15,0	1/1:0,0:5:15.03:145,15,0	1/1:0,6:9:25.32:352,25,0	1/1:0,5:5:11.93:147,12,0	./.	1/1:0,5:5:11.87:119,12,0	0/1:0,3:3:0.01:0,0,0	0/0:0,8:8:0.29:0,0,1	0/1:1,6:7:6.18:122,0,6	1/1:0,1:2:5.95:54,6,0	1/1:1,2:3:3.01:44,3,0	1/1:0,1:1:3.01:45,3,0
chr10	57056367	.	C	CT	8766.95	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-4.165;DP=708;FS=2.604;HRun=1;HaplotypeScore=122.8136;InbreedingCoeff=1.0000;MQ=81.86;MQ0=0;MQRankSum=-4.804;QD=39.31;ReadPosRankSum=3.109;VQSLOD=4.5882;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:58:99:0,171,2168	0/0:13,0:13:39.13:0,39,506	0/0:29,0:29:84.24:0,84,1031	0/0:18,0:18:53.69:0,54,618	0/0:36,0:36:99:0,99,1282	1/1:3,14:17:39.13:583,39,0	1/1:1,28:29:63.21:944,63,0	0/0:26,0:26:78.21:0,78,994	0/0:17,0:17:42.14:0,42,544	0/0:26,0:26:78.25:0,78,999	0/0:26,0:26:66.19:0,66,836	1/1:1,22:23:69.23:1032,69,0	0/0:26,0:26:78.18:0,78,959	0/0:18,0:18:51.17:0,51,659	0/0:31,0:31:75.24:0,75,973	1/1:2,38:40:99:1682,114,0	1/1:3,23:26:66.22:975,66,0	1/1:0,18:18:54.18:809,54,0	0/0:13,0:13:39.13:0,39,506	0/0:28,0:28:75.24:0,75,973	0/0:34,0:34:96.31:0,96,1241	1/1:2,20:22:60.20:889,60,0	1/1:0,26:26:69.23:1012,69,0	1/1:4,18:22:60.12:840,60,0	0/0:18,0:18:51.15:0,51,646	0/0:22,0:21:66.21:0,66,857	0/0:32,0:32:72.23:0,72,932	0/0:14,0:14:39.13:0,39,506
chr10	57056436	.	C	CAT	25559.95	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-13.367;DP=682;FS=4.143;HRun=0;HaplotypeScore=71.5173;InbreedingCoeff=0.9964;MQ=82.64;MQ0=2;MQRankSum=-4.162;QD=48.50;ReadPosRankSum=2.005;VQSLOD=6.1511;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,132,1962	1/1:0,8:8:24.08:459,24,0	0/0:22,0:22:57.08:0,57,766	0/0:21,0:21:50.33:0,50,764	0/0:29,0:29:81.26:0,81,1185	1/1:2,20:22:60.14:1088,60,0	1/1:7,20:27:69.20:1234,69,0	1/1:0,31:32:96.17:1549,96,0	1/1:0,24:25:66.23:1262,66,0	1/1:2,30:32:93.04:1689,93,0	1/1:2,23:25:60.21:1146,60,0	1/1:2,26:29:78.21:1388,78,0	0/0:23,0:23:69.21:0,69,1020	0/0:15,0:15:45.14:0,45,668	1/1:1,41:42:99:1989,105,0	1/1:3,26:29:84.27:1573,84,0	1/1:2,26:28:63.22:1177,63,0	1/1:5,12:17:42.14:796,42,0	1/1:1,18:21:60.15:1038,60,0	1/1:0,31:32:84.28:1506,84,0	1/1:0,20:20:51.17:976,51,0	1/1:1,15:17:48.08:859,48,0	1/1:6,14:20:54.11:907,54,0	1/1:1,18:19:51.16:922,51,0	1/1:0,20:20:60.20:1081,60,0	1/1:0,26:26:78.27:1487,78,0	1/1:2,26:28:63.21:1165,63,0	1/1:0,6:6:15.05:269,15,0
chr10	57056437	.	A	AT	7609.96	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=15.760;DP=677;FS=6.439;HRun=0;HaplotypeScore=120.4045;InbreedingCoeff=0.9579;MQ=81.69;MQ0=2;MQRankSum=-5.059;QD=14.50;ReadPosRankSum=3.686;VQSLOD=6.6809;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,132,1819	1/1:8,0:8:23.22:131,23,0	0/0:21,0:21:60.18:0,60,807	0/0:20,0:20:57.15:0,57,730	0/0:29,0:29:81.25:0,81,1093	1/1:21,1:22:34.41:302,34,0	1/1:27,0:27:29.14:348,29,0	1/1:30,0:30:72.19:532,72,0	1/1:25,0:25:63.86:360,64,0	1/1:33,0:32:73.92:459,74,0	1/1:25,1:26:58.16:335,58,0	1/1:28,1:29:72.03:406,72,0	0/0:23,0:23:69.23:0,69,960	0/0:15,0:15:45.14:0,45,614	1/1:42,0:42:77.05:566,77,0	1/1:29,0:29:81.38:466,81,0	1/1:29,0:28:42.18:330,42,0	1/1:16,0:16:3.02:182,3,0	1/1:20,1:21:21.68:265,22,0	1/1:32,0:32:81.72:542,82,0	1/1:21,0:21:49.34:278,49,0	1/1:16,1:17:46.57:284,47,0	1/1:19,0:19:34.60:293,35,0	1/1:21,0:21:49.54:306,50,0	1/1:20,0:20:57.86:363,58,0	1/1:26,0:26:75.32:423,75,0	1/1:26,0:26:15.62:334,16,0	1/1:6,0:6:14.62:104,15,0
chr10	57057422	.	T	TC	4422.45	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-11.619;DP=545;FS=0.842;HRun=0;HaplotypeScore=57.0461;InbreedingCoeff=0.9681;MQ=55.15;MQ0=12;MQRankSum=6.145;QD=22.22;ReadPosRankSum=5.235;VQSLOD=6.4562;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:39:84.88:0,85,775	0/0:6,0:6:10.82:0,11,58	0/0:21,0:10:17.46:0,17,129	0/0:8,0:4:6.07:0,6,29	0/0:16,0:16:35.89:0,36,320	0/0:22,0:22:20.80:0,21,150	0/0:22,0:19:24.49:0,24,154	0/0:38,0:35:76.81:0,77,539	1/1:0,11:11:15.04:174,15,0	1/1:0,13:13:27.08:320,27,0	1/1:7,2:7:17.68:150,18,0	0/0:16,0:16:38.48:0,38,267	0/0:16,0:16:47.99:0,48,560	0/0:15,0:14:33.85:0,34,352	1/1:2,24:26:41.79:456,42,0	0/0:24,0:24:29.80:0,30,227	0/0:37,0:36:30.98:0,31,193	0/0:23,0:21:45.25:0,45,302	1/1:4,23:26:34.80:631,35,0	1/1:1,17:18:42.33:426,42,0	1/1:3,10:13:17.01:237,17,0	0/0:10,0:10:20.10:0,20,127	0/0:14,0:14:28.60:0,29,209	0/0:18,0:18:13.73:0,14,95	1/1:1,20:21:40.36:463,40,0	1/1:1,22:23:68.70:728,69,0	1/1:2,23:24:48.04:550,48,0	1/1:5,7:11:29.14:288,29,0
chr10	57058644	.	T	TG	8858.35	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-17.720;DP=818;FS=5.858;HRun=4;HaplotypeScore=75.7544;InbreedingCoeff=0.9999;MQ=81.37;MQ0=0;MQRankSum=-5.108;QD=33.94;ReadPosRankSum=3.433;VQSLOD=5.5179;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,156,1740	0/0:11,0:11:33.08:0,33,364	0/0:22,0:22:45:0,45,467	0/0:22,0:22:42.16:0,42,548	0/0:15,0:15:42.12:0,42,476	1/1:1,24:25:69.23:943,69,0	1/1:3,13:16:33.11:451,33,0	0/0:40,0:40:99:0,117,1303	0/0:24,0:24:69.20:0,69,783	0/0:32,0:32:87.25:0,87,986	0/0:23,0:23:69.19:0,69,774	1/1:2,37:39:99:1353,99,0	0/0:37,0:37:99:0,102,1156	0/0:27,0:27:72.20:0,72,816	0/0:47,0:47:99:0,138,1523	1/1:4,43:47:80.60:1484,81,0	1/1:2,27:29:75.08:1026,75,0	1/1:6,23:29:63.21:862,63,0	0/0:26,0:26:55.44:0,55,675	0/0:23,0:23:69.17:0,69,763	0/0:43,0:43:99:0,123,1374	1/1:1,22:23:54.18:732,54,0	1/1:0,19:19:57.19:776,57,0	1/1:2,32:34:90.30:1231,90,0	0/0:26,0:26:69.19:0,69,782	0/0:35,0:35:93.21:0,93,1033	0/0:32,0:32:92.42:0,92,993	0/0:17,0:17:51.12:0,51,566
chr10	57060670	.	TAG	T	2736.69	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=14.553;DP=351;FS=6.994;HRun=0;HaplotypeScore=77.8864;InbreedingCoeff=0.9877;MQ=76.64;MQ0=0;MQRankSum=-13.995;QD=25.11;ReadPosRankSum=0.629;VQSLOD=4.4103;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:90.28:0,90,1777	0/0:7,0:7:18.06:0,18,343	0/0:9,0:9:27.08:0,27,495	0/0:10,0:10:23.47:0,23,531	0/0:16,0:16:48.16:0,48,951	0/0:16,0:16:48.16:0,48,975	0/0:13,0:13:39.12:0,39,744	0/0:23,0:23:66.23:0,66,1312	1/1:0,7:7:21.04:206,21,0	1/1:0,7:9:25.28:234,25,0	1/1:1,7:8:21.02:196,21,0	0/0:13,0:13:39.13:0,39,792	0/0:14,0:14:42.14:0,42,851	0/0:10,0:10:30.10:0,30,609	1/1:0,15:15:45.03:417,45,0	0/0:14,0:14:42.14:0,42,853	0/0:9,0:9:27.09:0,27,549	0/0:15,0:15:45.15:0,45,912	1/1:2,9:11:32.98:331,33,0	1/1:1,11:12:33.01:301,33,0	1/1:1,9:10:25.06:211,25,0	0/0:15,0:15:45.15:0,45,914	0/0:14,0:14:42.14:0,42,852	0/0:14,0:14:42.14:0,42,853	1/1:0,14:14:42.04:393,42,0	1/1:0,8:8:24.04:235,24,0	1/1:0,12:12:36.05:350,36,0	1/1:0,3:3:9.01:87,9,0
chr10	57060673	.	TAGGTC	T	5064.03	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=14.226;DP=352;FS=7.025;HRun=0;HaplotypeScore=92.3020;InbreedingCoeff=0.9871;MQ=76.65;MQ0=0;MQRankSum=-14.123;QD=47.33;ReadPosRankSum=1.019;VQSLOD=4.2503;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:90.30:0,90,2834	0/0:6,0:6:15.05:0,15,483	0/0:9,0:9:27.09:0,27,810	0/0:10,0:10:29.46:0,29,819	0/0:15,0:15:45.14:0,45,1424	0/0:17,0:17:51.18:0,51,1698	0/0:13,0:13:39.13:0,39,1244	0/0:24,0:24:69.23:0,69,2145	1/1:1,7:8:24.08:389,24,0	1/1:2,7:9:23.36:357,23,0	1/1:0,7:7:21.07:343,21,0	0/0:13,0:13:39.12:0,39,1204	0/0:15,0:15:45.15:0,45,1473	0/0:10,0:10:30.10:0,30,998	1/1:0,15:15:45.15:731,45,0	0/0:14,0:14:42.14:0,42,1391	0/0:9,0:9:27.09:0,27,889	0/0:15,0:15:45.15:0,45,1474	1/1:2,9:11:32.78:522,33,0	1/1:0,11:11:30.10:484,30,0	1/1:0,9:9:27.07:397,27,0	0/0:16,0:16:48.16:0,48,1543	0/0:14,0:14:42.13:0,42,1324	0/0:15,0:15:45.15:0,45,1481	1/1:0,14:14:42.14:686,42,0	1/1:0,8:8:24.08:403,24,0	1/1:0,12:12:36.12:602,36,0	1/1:0,3:3:9.03:150,9,0
chr10	57060803	.	A	AT	6176.21	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-13.956;DP=469;FS=13.922;HRun=8;HaplotypeScore=45.5762;InbreedingCoeff=0.9820;MQ=72.49;MQ0=0;MQRankSum=0.588;QD=29.55;ReadPosRankSum=0.960;VQSLOD=3.8547;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:77.52:0,78,695	1/1:0,5:5:15.04:173,15,0	0/0:10,0:9:18.01:0,18,163	0/0:7,0:7:14.87:0,15,124	0/0:14,0:14:35.91:0,36,314	1/1:1,13:14:8.64:353,9,0	1/1:1,21:22:63.19:727,63,0	1/1:0,31:31:93.18:1004,93,0	0/0:20,0:20:57.03:0,57,522	0/0:14,0:14:30.01:0,30,273	0/0:12,0:12:17.99:0,18,165	1/1:1,24:25:57.17:658,57,0	0/0:11,0:11:27.01:0,27,246	0/0:21,0:21:57.02:0,57,517	0/0:25,0:25:68.95:0,69,616	1/1:2,22:24:63.18:718,63,0	1/1:1,29:30:78.23:900,78,0	1/1:1,17:18:45.13:519,45,0	0/0:12,0:12:27:0,27,243	0/0:13,0:13:35.24:0,35,308	0/0:24,2:26:28.06:0,28,506	1/1:3,10:13:30.05:330,30,0	1/1:2,7:9:24.07:274,24,0	1/1:1,17:18:45.13:519,45,0	0/0:7,0:7:21.01:0,21,192	0/0:15,0:15:36.01:0,36,327	0/0:12,0:12:26.93:0,27,236	0/0:8,0:8:24.01:0,24,220
chr10	57063922	.	G	GA	4524.92	PASS	AB=0.835;AC=20;AF=0.357;AN=56;BaseQRankSum=-10.628;DP=739;FS=5.710;HRun=11;HaplotypeScore=81.2691;InbreedingCoeff=0.6211;MQ=69.90;MQ0=0;MQRankSum=-0.513;QD=14.79;ReadPosRankSum=1.459;VQSLOD=5.4379;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,1:34:55.19:0,55,602	0/0:7,0:7:8.89:0,9,70	0/0:29,0:25:32.88:0,33,312	0/0:20,0:18:13.30:0,13,132	0/0:31,1:34:42.32:0,42,492	0/1:6,7:13:5.20:134,0,5	1/1:4,15:19:18.85:373,19,0	0/0:37,0:41:78.89:0,79,579	0/0:17,0:18:40.86:0,41,308	0/0:23,0:23:6.08:0,6,226	0/0:18,1:20:22.39:0,22,346	1/1:8,39:47:84.17:853,84,0	0/0:27,0:28:64.77:0,65,493	0/0:24,0:24:58.29:0,58,443	0/0:48,0:49:99:0,109,841	1/1:4,33:38:81:807,81,0	1/1:11,25:36:45.90:647,46,0	1/1:8,19:27:6.02:562,6,0	0/1:16,2:19:51.39:51,0,155	0/0:30,2:32:19.74:0,20,514	0/1:16,3:21:12.04:12,0,258	1/1:4,17:21:42.07:421,42,0	1/1:7,9:17:0.80:164,1,0	1/1:11,14:27:11.45:484,11,0	0/1:16,2:20:17.99:18,0,224	0/0:22,1:24:19.36:0,19,324	0/0:29,0:31:13.60:0,14,379	0/0:17,0:19:40.88:0,41,308
chr10	57068003	.	GT	G	15276.19	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=10.830;DP=649;FS=4.051;HRun=4;HaplotypeScore=84.9629;InbreedingCoeff=0.9980;MQ=77.87;MQ0=0;MQRankSum=-6.030;QD=31.18;ReadPosRankSum=3.109;VQSLOD=5.4394;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,144,1972	1/1:1,12:13:33.06:377,33,0	0/0:25,0:25:56.97:0,57,731	0/0:20,0:20:53.54:0,54,703	0/0:16,0:16:48.13:0,48,652	1/1:0,14:14:33.10:393,33,0	1/1:2,20:22:57.17:684,57,0	1/1:3,34:37:99:1176,99,0	1/1:0,24:24:69.21:827,69,0	1/1:2,25:27:72.17:846,72,0	1/1:0,14:14:33.10:396,33,0	1/1:2,43:45:99:1546,129,0	0/0:17,0:17:51.17:0,51,709	0/0:31,0:31:93.30:0,93,1286	1/1:2,30:32:84.25:1005,84,0	1/1:1,35:36:99:1259,105,0	1/1:0,21:21:54.16:646,54,0	1/1:2,13:15:33.10:395,33,0	1/1:3,20:23:60.13:681,60,0	1/1:1,12:13:33.10:395,33,0	1/1:1,28:29:66.20:792,66,0	1/1:1,8:9:21.06:252,21,0	1/1:0,9:9:21.06:252,21,0	1/1:3,24:27:66.20:788,66,0	1/1:0,30:30:81.25:977,81,0	1/1:1,17:18:51.09:583,51,0	1/1:1,20:21:51.16:612,51,0	1/1:0,11:11:33.10:396,33,0
chr10	57068070	.	GTTCTT	G	4131.24	PASS	AB=0.770;AC=22;AF=0.393;AN=56;BaseQRankSum=14.375;DP=536;FS=11.795;HRun=0;HaplotypeScore=200.4410;InbreedingCoeff=-0.5303;MQ=63.83;MQ0=0;MQRankSum=-13.497;QD=11.64;ReadPosRankSum=9.401;VQSLOD=0.6473;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,138,4281	0/1:6,4:10:99:147,0,253	0/0:27,0:27:81.26:0,81,2120	0/0:25,0:25:68.45:0,68,1985	0/0:20,0:20:57.20:0,57,1763	0/1:10,7:17:99:255,0,516	0/1:14,4:18:99:119,0,1065	0/1:17,0:17:43.28:43,0,890	0/1:13,7:20:99:254,0,524	0/1:8,3:11:99:135,0,169	0/1:4,2:6:26.57:27,0,314	0/1:22,15:37:99:545,0,1062	0/0:21,0:21:63.22:0,63,1929	0/0:24,0:24:69.24:0,69,2118	0/1:20,10:30:99:414,0,962	0/1:16,14:30:99:572,0,455	0/1:16,3:19:63.37:63,0,528	0/1:6,4:9:99:147,0,341	0/1:6,3:9:99:120,0,249	0/1:9,3:12:99:99,0,515	0/0:17,1:18:33.11:0,33,913	0/1:6,4:10:99:142,0,323	0/1:8,1:9:22.08:22,0,451	0/1:22,5:27:99:178,0,799	0/1:15,8:23:99:304,0,507	0/1:7,5:12:99:183,0,600	0/1:14,10:24:99:320,0,1048	1/1:3,1:4:3.01:43,3,0
chr10	57068081	.	AGTTAGTTCCCG	A	8517.70	PASS	AB=0.721;AC=21;AF=0.375;AN=56;BaseQRankSum=15.861;DP=467;FS=2.888;HRun=0;HaplotypeScore=223.7131;InbreedingCoeff=-0.4827;MQ=69.68;MQ0=0;MQRankSum=-13.217;QD=30.64;ReadPosRankSum=7.696;VQSLOD=3.4311;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,138,7097	0/1:4,4:8:99:322,0,155	0/0:23,0:23:66.22:0,66,2244	0/0:20,0:20:57.16:0,57,1902	0/0:22,0:22:66.23:0,66,3148	0/1:9,7:16:99:558,0,385	0/1:14,4:18:99:293,0,464	0/0:15,0:15:45.10:0,45,641	0/1:7,7:14:99:563,0,282	0/1:4,3:7:99:235,0,125	0/1:6,2:8:88.39:88,0,156	0/1:19,15:34:99:1236,0,707	0/0:21,0:21:63.22:0,63,2940	0/0:21,0:21:63.20:0,63,2811	0/1:15,10:25:99:785,0,604	0/1:6,14:20:99:1181,0,170	0/1:10,3:13:99:183,0,392	0/1:4,4:7:99:159,0,130	0/1:5,3:8:99:243,0,129	0/1:8,3:11:99:226,0,309	0/0:19,1:20:45.62:0,46,755	0/1:4,4:8:86.16:316,0,86	0/1:6,1:8:63.08:63,0,268	0/1:12,5:17:99:391,0,286	0/1:9,8:17:99:460,0,369	0/1:10,5:15:99:405,0,343	0/1:12,10:22:99:721,0,398	1/1:0,1:1:3.01:87,3,0
chr10	57070365	.	T	TTGTG	5884.58	PASS	AB=0.758;AC=41;AF=0.788;AN=52;BaseQRankSum=1.412;DP=734;FS=3.149;HRun=0;HaplotypeScore=156.9574;InbreedingCoeff=0.3885;MQ=64.35;MQ0=19;MQRankSum=-1.422;QD=9.74;ReadPosRankSum=-2.214;VQSLOD=3.9184;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:34,0:44:3.71:4,0,75	1/1:7,1:13:12.48:187,12,0	./.	./.	0/1:13,1:17:73.35:97,0,73	1/1:11,9:24:12.04:282,12,0	1/1:22,8:33:11.67:224,12,0	1/1:45,0:44:19.72:253,20,0	1/1:12,0:16:5.21:66,5,0	1/1:16,0:16:10.84:112,11,0	1/1:9,0:15:6.02:103,6,0	0/1:23,0:36:62.94:68,0,63	0/0:22,0:22:23.71:0,24,347	0/0:28,0:30:45.14:0,45,659	0/0:30,0:30:33.09:0,33,472	1/1:17,14:34:32.44:718,32,0	1/1:13,7:23:18.06:423,18,0	1/1:16,4:25:3.32:218,3,0	1/1:20,0:19:21.05:334,21,0	0/1:13,2:21:4.81:262,0,5	1/1:33,0:36:8.38:126,8,0	1/1:24,7:37:11.95:282,12,0	0/1:16,0:21:29.47:36,0,29	1/1:18,14:31:26.65:586,27,0	1/1:18,2:28:20.72:343,21,0	1/1:21,0:21:30:522,30,0	1/1:15,1:20:21.07:388,21,0	1/1:5,2:12:12.04:253,12,0
chr10	57070964	.	TG	T	11869.70	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=10.173;DP=739;FS=6.902;HRun=9;HaplotypeScore=76.7047;InbreedingCoeff=0.9904;MQ=81.85;MQ0=0;MQRankSum=-1.093;QD=22.96;ReadPosRankSum=3.313;VQSLOD=5.7284;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:42:99:0,111,1233	0/0:8,0:8:24.07:0,24,277	0/0:26,1:26:9.65:0,10,395	0/0:21,0:21:30:0,30,310	0/0:34,0:35:90.10:0,90,1016	1/1:1,15:16:36.02:329,36,0	1/1:0,25:25:69.04:632,69,0	0/0:33,0:33:87.25:0,87,994	1/1:3,24:27:66.04:604,66,0	1/1:3,26:29:75.04:686,75,0	1/1:3,20:23:45.02:411,45,0	1/1:0,35:35:96.05:878,96,0	0/0:31,0:31:90.26:0,90,1034	0/0:25,0:25:60.13:0,60,669	1/1:2,34:36:90.04:823,90,0	1/1:4,40:44:99:961,105,0	1/1:4,29:33:81.03:741,81,0	1/1:2,16:18:48.02:439,48,0	1/1:2,22:24:63:570,63,0	1/1:5,25:30:69.42:622,69,0	1/1:5,28:33:55.19:639,55,0	1/1:0,24:24:71.99:650,72,0	1/1:3,23:26:63.02:576,63,0	1/1:1,26:27:75.04:686,75,0	1/1:1,9:10:27.01:247,27,0	1/1:3,19:22:54.01:494,54,0	1/1:1,24:25:72.04:659,72,0	1/1:0,10:10:24.01:220,24,0
chr10	57071076	.	AC	A	4803.68	PASS	AB=0.909;AC=19;AF=0.339;AN=56;BaseQRankSum=-3.668;DP=613;FS=10.056;HRun=9;HaplotypeScore=89.1262;InbreedingCoeff=0.9417;MQ=91.12;MQ0=0;MQRankSum=-2.199;QD=21.16;ReadPosRankSum=5.212;VQSLOD=4.8210;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:69.17:0,69,782	0/1:9,1:10:3.39:3,0,218	0/0:41,1:41:42.68:0,43,568	0/0:32,0:31:33.56:0,34,491	0/0:19,0:19:54.15:0,54,614	1/1:4,19:23:51.03:467,51,0	1/1:1,18:19:54.03:494,54,0	0/0:34,1:35:44.67:0,45,732	0/0:7,0:22:22.85:0,23,121	0/0:5,0:16:28.83:0,29,168	0/0:7,0:16:25.84:0,26,153	1/1:2,16:18:48.03:439,48,0	0/0:14,0:14:42.12:0,42,485	0/0:22,0:22:54.16:0,54,623	0/0:7,0:23:34.25:0,34,178	1/1:4,39:43:99:1015,111,0	1/1:2,25:27:63.03:576,63,0	1/1:1,19:20:51.03:467,51,0	0/0:7,0:24:52.06:0,52,301	0/0:2,0:17:31.36:0,31,164	0/0:1,0:15:25.57:0,26,130	1/1:2,18:20:44.11:410,44,0	1/1:3,16:19:38.90:357,39,0	1/1:3,25:28:63.02:576,63,0	0/0:3,0:15:31.41:0,31,171	0/0:8,0:15:23.43:0,23,155	0/0:4,0:16:16.95:0,17,84	0/0:4,0:16:28.62:0,29,153
chr10	57071257	.	T	TA	13061.15	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-7.653;DP=603;FS=0.000;HRun=8;HaplotypeScore=62.5468;InbreedingCoeff=0.9958;MQ=84.04;MQ0=0;MQRankSum=-3.460;QD=27.97;ReadPosRankSum=2.341;VQSLOD=5.3739;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:51.03:0,51,467	1/1:0,6:6:18.05:208,18,0	0/0:22,0:22:33.23:0,33,342	0/0:16,0:15:17.31:0,17,131	0/0:39,0:39:99:0,102,929	1/1:3,17:21:47.97:534,48,0	1/1:4,23:27:63.19:727,63,0	1/1:10,16:26:23.67:515,24,0	1/1:2,17:19:54.16:622,54,0	1/1:4,22:26:63.19:726,63,0	1/1:5,25:30:72.21:831,72,0	1/1:2,18:20:48.14:548,48,0	0/0:22,0:22:57.02:0,57,522	0/0:19,0:19:57.03:0,57,522	1/1:2,15:17:45.13:519,45,0	1/1:2,26:29:75.06:845,75,0	1/1:2,23:25:57.17:658,57,0	1/1:0,15:15:45.13:519,45,0	1/1:7,18:25:57.12:642,57,0	1/1:4,23:27:69.21:796,69,0	1/1:2,15:17:39.12:450,39,0	1/1:4,19:23:54.16:623,54,0	1/1:1,22:23:66.20:762,66,0	1/1:1,20:21:50.88:573,51,0	1/1:2,13:15:33.10:381,33,0	1/1:3,20:23:57.15:647,57,0	1/1:1,19:20:48.14:554,48,0	1/1:1,11:12:33.10:381,33,0
chr10	57072714	.	ATTT	A	4289.63	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=6.027;DP=518;FS=0.000;HRun=14;HaplotypeScore=96.8715;InbreedingCoeff=0.9907;MQ=70.65;MQ0=0;MQRankSum=-1.896;QD=24.24;ReadPosRankSum=3.978;VQSLOD=4.1694;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:36:91.79:0,92,1533	0/0:8,0:11:18.06:0,18,296	0/0:18,0:16:19.30:0,19,268	0/0:14,0:11:26.95:0,27,347	0/0:23,0:24:57.19:0,57,1017	0/0:15,0:15:39.13:0,39,681	0/0:20,0:22:63.17:0,63,1059	0/0:13,0:25:63.15:0,63,834	1/1:2,12:15:41.91:454,42,0	1/1:3,7:10:21.01:235,21,0	1/1:2,9:11:24.02:280,24,0	0/0:19,0:20:48.13:0,48,838	0/0:17,0:17:48.16:0,48,850	0/0:9,0:9:21.07:0,21,382	1/1:5,23:30:65.98:735,66,0	0/0:13,0:14:39.11:0,39,636	0/0:35,0:41:99:0,107,1779	0/0:16,0:20:45.12:0,45,698	1/1:1,16:18:51.08:577,51,0	1/1:4,14:18:38.98:456,39,0	1/1:4,10:14:21:245,21,0	0/0:13,0:15:31.34:0,31,512	0/0:11,0:11:27.08:0,27,478	0/0:26,0:28:72.20:0,72,1273	1/1:0,12:15:30.14:363,30,0	1/1:4,16:20:48.06:547,48,0	1/1:6,10:17:23.65:256,24,0	1/1:5,4:9:11.98:140,12,0
chr10	57073991	.	A	AT	166.77	PASS	AB=0.873;AC=7;AF=0.125;AN=56;BaseQRankSum=7.343;DP=576;FS=6.524;HRun=0;HaplotypeScore=111.3730;InbreedingCoeff=0.1980;MQ=42.76;MQ0=9;MQRankSum=-6.225;QD=1.76;ReadPosRankSum=-2.368;VQSLOD=1.7354;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,121,1597	0/0:10,0:10:5.57:0,6,111	0/0:11,0:9:24.02:0,24,291	0/0:20,0:11:31.92:0,32,420	0/0:16,0:15:27.02:0,27,351	0/0:21,0:20:6:0,6,65	0/0:46,0:43:17.07:0,17,183	0/1:22,0:20:99:103,0,565	1/1:16,0:16:1.85:5,2,0	0/1:15,3:18:49.15:49,0,445	0/0:8,4:12:10.68:0,11,86	0/0:40,0:40:11.55:0,12,150	0/0:23,0:23:56.12:0,56,683	0/0:25,0:25:66.04:0,66,863	1/1:23,0:21:8.39:35,8,0	0/0:31,0:30:9.90:0,10,93	0/0:22,0:22:23.05:0,23,233	0/0:13,0:13:17.53:0,18,212	0/0:13,1:14:10.17:0,10,379	0/0:9,4:13:7.44:0,7,89	0/0:18,0:18:6.02:0,6,84	0/0:21,0:20:6:0,6,64	0/0:10,0:10:8.98:0,9,71	0/0:24,0:24:12.04:0,12,160	0/0:11,2:12:3.38:0,3,46	0/0:17,2:17:2.80:0,3,481	0/1:11,5:15:51.65:92,0,52	0/0:12,0:10:5.63:0,6,119
chr10	57073993	.	A	AT	197.76	PASS	AB=0.913;AC=14;AF=0.250;AN=56;BaseQRankSum=8.543;DP=573;FS=1.477;HRun=0;HaplotypeScore=111.6093;InbreedingCoeff=0.0285;MQ=43.05;MQ0=8;MQRankSum=-7.277;QD=0.92;ReadPosRankSum=0.769;VQSLOD=2.3449;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,124,1627	0/0:10,0:10:5.98:0,6,109	0/0:11,0:9:27.04:0,27,334	0/0:20,0:12:32.90:0,33,424	0/0:16,0:15:30.03:0,30,392	0/0:21,0:20:1.63:0,2,37	0/1:43,0:40:4.20:4,0,123	0/1:18,4:20:57.21:57,0,545	1/1:16,0:16:1.85:5,2,0	0/1:15,4:19:71.05:71,0,406	0/0:8,4:12:10.67:0,11,77	0/0:39,0:39:11.54:0,12,149	0/0:23,0:23:55.35:0,55,680	0/0:25,0:25:45.72:0,46,853	1/1:23,0:21:8.43:50,8,0	0/0:30,0:29:9.49:0,9,92	0/1:23,0:23:12.76:13,0,167	0/1:13,0:13:2.54:3,0,160	0/0:14,1:15:7.35:0,7,333	0/0:9,4:13:7.42:0,7,73	0/0:18,0:18:6.02:0,6,82	0/0:21,0:20:1.46:0,1,37	1/1:9,0:9:0.85:2,1,0	0/0:24,0:24:12:0,12,140	0/0:10,2:12:2.41:0,2,43	0/1:17,2:17:30.58:31,0,458	0/1:10,6:15:25.45:92,0,25	0/1:12,0:10:3.57:4,0,100
chr10	57073995	.	A	AT	603.49	PASS	AB=0.899;AC=21;AF=0.375;AN=56;BaseQRankSum=8.556;DP=560;FS=4.019;HRun=0;HaplotypeScore=108.3612;InbreedingCoeff=-0.0265;MQ=44.26;MQ0=8;MQRankSum=-7.462;QD=2.01;ReadPosRankSum=1.440;VQSLOD=2.6460;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,115,1559	0/1:10,0:10:32.31:32,0,71	0/0:11,0:9:27.09:0,27,369	0/0:18,0:11:33.08:0,33,431	0/0:17,0:16:33.03:0,33,417	1/1:20,0:19:2.99:23,3,0	0/1:31,12:40:21.69:22,0,78	0/1:18,4:20:99:115,0,494	1/1:16,0:16:1.85:5,2,0	0/1:14,5:19:99:115,0,337	0/0:8,4:12:9.49:0,9,56	0/0:39,1:40:11.49:0,11,120	0/0:22,0:22:54.46:0,54,673	0/0:25,0:25:48.90:0,49,839	1/1:23,0:21:8.64:51,9,0	0/0:30,0:29:9.44:0,9,71	0/1:23,0:23:42.24:42,0,134	0/1:11,0:11:15.80:16,0,104	0/1:13,1:14:47.09:47,0,220	0/0:7,4:12:4.43:0,4,46	0/0:17,0:17:3.01:0,3,42	1/1:22,0:21:2.83:24,3,0	1/1:9,0:9:5.96:45,6,0	0/1:23,0:23:7.22:7,0,102	0/0:10,3:12:2.05:0,2,41	0/1:15,3:16:52.53:53,0,370	0/1:8,7:14:18.59:158,0,19	0/1:12,0:10:10.22:10,0,40
chr10	57073997	.	A	ATCAT	4994.91	PASS	AB=0.803;AC=28;AF=0.500;AN=56;BaseQRankSum=6.589;DP=618;FS=3.805;HRun=0;HaplotypeScore=186.8963;InbreedingCoeff=-0.0377;MQ=44.37;MQ0=8;MQRankSum=-8.885;QD=11.12;ReadPosRankSum=0.201;VQSLOD=4.4332;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,107,2215	0/1:6,0:11:57.89:128,0,58	0/0:12,0:10:27.09:0,27,532	0/0:19,0:11:33.08:0,33,551	0/0:17,0:16:23.31:0,23,576	1/1:20,0:19:3.01:72,3,0	0/1:25,7:41:99:167,0,109	0/1:23,0:25:99:628,0,319	1/1:11,0:21:11.39:237,11,0	0/1:17,1:22:99:716,0,227	0/0:9,0:13:0.88:0,1,2	0/1:39,1:40:36.43:43,0,36	0/0:22,0:22:48.16:0,48,905	0/0:24,0:24:63.01:0,63,1202	1/1:19,0:27:6.45:113,6,0	0/1:30,0:29:15.37:137,0,15	0/1:15,10:26:99:344,0,159	0/1:3,9:13:70.06:152,0,70	0/1:17,0:18:98.42:342,0,98	1/1:9,0:14:2.94:18,3,0	0/0:16,0:20:3.01:0,3,60	1/1:21,0:20:2.55:72,3,0	1/1:10,0:10:6.02:139,6,0	0/1:7,14:22:36.31:80,0,36	0/1:18,0:20:16.37:16,0,38	0/1:24,0:25:99:778,0,243	1/1:12,1:18:3.52:621,4,0	1/1:7,0:11:8.82:191,9,0
chr10	57074000	.	C	CACACACACATCATCAT	10543.44	PASS	AB=0.929;AC=43;AF=0.768;AN=56;BaseQRankSum=3.426;DP=534;FS=3.038;HRun=0;HaplotypeScore=178.1915;InbreedingCoeff=0.7268;MQ=52.48;MQ0=7;MQRankSum=-8.578;QD=25.59;ReadPosRankSum=-3.405;VQSLOD=3.0126;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:60.23:0,60,2865	1/1:10,0:10:9.47:215,9,0	0/0:14,0:13:29.92:0,30,616	0/0:14,0:9:24.01:0,24,537	0/0:16,0:15:30.10:0,30,885	1/1:1,0:18:3.01:215,3,0	1/1:30,0:30:21.98:350,22,0	1/1:17,0:19:52.02:1395,52,0	1/1:15,0:15:9.03:277,9,0	1/1:13,0:15:41.17:1245,41,0	1/1:8,0:8:2.90:16,3,0	1/1:1,0:43:6.02:281,6,0	0/0:18,0:18:51.14:0,51,1483	0/0:21,0:21:52.80:0,53,1741	1/1:23,0:21:5.05:111,5,0	1/1:0,26:38:8.75:665,9,0	1/1:17,0:22:39.50:1226,40,0	1/1:11,0:13:12.04:333,12,0	1/1:15,0:16:34.50:642,35,0	0/1:12,0:13:0:0,0,0	1/1:13,0:14:2.80:25,3,0	1/1:2,0:19:2.98:215,3,0	1/1:1,0:14:6.02:403,6,0	1/1:17,0:18:6.02:204,6,0	1/1:14,0:14:12.44:115,12,0	1/1:17,0:18:48.13:1411,48,0	1/1:13,0:12:30.10:912,30,0	1/1:11,0:10:9.03:288,9,0
chr10	57074628	.	AT	A	7665.24	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=13.112;DP=635;FS=1.327;HRun=7;HaplotypeScore=64.7146;InbreedingCoeff=0.9992;MQ=77.89;MQ0=0;MQRankSum=-2.169;QD=27.67;ReadPosRankSum=-0.187;VQSLOD=5.3734;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,126,1571	1/1:0,8:8:21.05:214,21,0	0/0:18,0:18:35.30:0,35,385	0/0:15,0:15:29.80:0,30,317	0/0:18,0:18:45.14:0,45,559	0/0:27,0:27:81.24:0,81,994	0/0:33,0:33:99:0,99,1220	1/1:2,34:36:99:1009,99,0	1/1:2,16:18:45.10:459,45,0	1/1:1,19:20:57.13:581,57,0	1/1:0,11:11:33.07:336,33,0	0/0:35,0:35:99:0,102,1269	0/0:21,0:21:60.19:0,60,754	0/0:28,0:28:78.24:0,78,970	1/1:1,36:37:99:1010,99,0	0/0:25,0:25:69.20:0,69,837	0/0:14,0:14:39.11:0,39,472	0/0:25,0:25:69.20:0,69,854	1/1:2,12:14:36.07:361,36,0	1/1:1,12:13:36.08:367,36,0	1/1:2,26:28:75.17:765,75,0	0/0:12,0:12:36.12:0,36,453	0/0:13,0:13:33.10:0,33,403	0/0:29,0:29:81.26:0,81,1019	1/1:2,20:22:57.13:581,57,0	1/1:1,23:24:69.13:695,69,0	1/1:0,31:31:84.19:857,84,0	1/1:0,15:15:42.10:428,42,0
chr10	57078219	.	ACACTTG	A	13033.82	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=17.500;DP=665;FS=14.532;HRun=0;HaplotypeScore=149.4428;InbreedingCoeff=0.9807;MQ=76.41;MQ0=0;MQRankSum=-17.303;QD=54.76;ReadPosRankSum=0.392;VQSLOD=4.4286;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,135,4809	1/1:3,4:7:6.02:142,6,0	0/0:16,0:16:48.16:0,48,1313	0/0:24,0:24:47.87:0,48,1350	0/0:25,0:25:75.26:0,75,2665	0/0:17,0:17:51.18:0,51,1768	0/0:30,0:30:87.30:0,87,2940	1/1:1,27:28:81.25:1818,81,0	1/1:1,20:21:48.16:1134,48,0	1/1:0,10:11:33.11:779,33,0	1/1:6,11:17:33.11:780,33,0	0/0:40,0:40:99:0,120,4088	0/0:32,0:32:96.32:0,96,3339	0/0:19,0:19:48.16:0,48,1653	1/1:0,22:22:51.01:1205,51,0	0/0:44,0:44:99:0,129,4452	0/0:47,0:47:99:0,138,4735	0/0:20,0:20:60.21:0,60,2065	1/1:1,8:9:24.08:542,24,0	1/1:1,23:24:63.22:1489,63,0	1/1:8,14:22:30.10:709,30,0	0/0:13,0:13:39.13:0,39,1388	0/0:27,0:27:75.26:0,75,2673	0/0:28,0:28:81.28:0,81,2821	1/1:1,11:12:24.08:567,24,0	1/1:2,23:25:69.19:1459,69,0	1/1:3,31:34:90.31:2127,90,0	1/1:0,6:6:12.04:284,12,0
chr10	57082347	.	T	TA	7446.75	PASS	AB=0.625;AC=34;AF=0.607;AN=56;BaseQRankSum=6.630;DP=513;FS=2.786;HRun=10;HaplotypeScore=86.5515;InbreedingCoeff=0.6942;MQ=69.24;MQ0=1;MQRankSum=-9.719;QD=23.42;ReadPosRankSum=0.428;VQSLOD=5.3258;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,105,862	0/0:6,0:6:17.98:0,18,148	0/0:18,1:16:2.71:0,3,166	0/0:18,0:16:2.93:0,3,86	0/0:17,0:17:38.89:0,39,311	1/1:6,19:25:44.59:575,45,0	1/1:3,10:13:14.81:323,15,0	0/0:25,0:25:59.90:0,60,489	1/1:2,9:11:30.06:312,30,0	1/1:5,27:32:78.20:829,78,0	1/1:7,10:17:14.43:344,14,0	1/1:7,17:24:63.08:643,63,0	0/0:23,0:23:52.93:0,53,418	0/0:20,0:20:47.93:0,48,391	1/1:5,10:15:36.08:376,36,0	1/1:3,10:13:35.67:352,36,0	1/1:10,13:23:29.38:392,29,0	1/1:2,9:11:27.07:285,27,0	1/1:5,14:19:45.11:476,45,0	0/1:7,6:13:0.64:180,0,1	0/1:2,7:9:18.83:197,0,19	1/1:6,11:17:45.08:455,45,0	1/1:7,14:21:26.35:462,26,0	0/1:4,3:7:25.92:81,0,26	0/1:3,13:16:1.25:340,0,1	1/1:5,23:28:50.69:729,51,0	0/0:20,0:20:38.75:0,39,308	1/1:1,3:4:9.02:96,9,0
chr10	57082369	.	AT	A	9498.82	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=11.573;DP=489;FS=2.790;HRun=4;HaplotypeScore=79.9091;InbreedingCoeff=0.9519;MQ=68.72;MQ0=1;MQRankSum=-9.639;QD=28.35;ReadPosRankSum=0.739;VQSLOD=4.4678;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:96.28:0,96,1284	0/0:8,0:8:24.04:0,24,297	0/0:16,0:13:31.49:0,31,348	0/0:14,0:12:0.96:0,1,137	0/0:14,0:14:42.14:0,42,583	1/1:5,21:26:62.90:654,63,0	1/1:1,13:14:32.93:343,33,0	0/0:26,0:26:72.24:0,72,1001	1/1:1,9:10:27.08:321,27,0	1/1:3,24:27:72.11:811,72,0	1/1:1,13:14:42:467,42,0	1/1:5,21:26:75.06:812,75,0	0/0:19,0:19:57.18:0,57,775	0/0:22,0:22:63.20:0,63,861	1/1:1,12:13:33.06:370,33,0	1/1:1,14:15:42.13:501,42,0	1/1:2,24:26:45.10:520,45,0	1/1:2,8:10:24.04:271,24,0	1/1:2,11:13:33.07:372,33,0	1/1:1,11:12:36.03:389,36,0	1/1:2,5:7:15:163,15,0	1/1:2,12:14:38.92:403,39,0	1/1:2,19:21:63.03:681,63,0	1/1:0,9:9:12.51:144,13,0	1/1:0,20:20:45.10:519,45,0	1/1:2,29:31:87.19:998,87,0	1/1:1,14:15:33.10:395,33,0	1/1:2,10:12:33.03:364,33,0
chr10	57090214	.	CTTTTTTT	C	9775.65	PASS	AB=0.630;AC=39;AF=0.696;AN=56;BaseQRankSum=11.172;DP=616;FS=0.396;HRun=18;HaplotypeScore=153.6105;InbreedingCoeff=0.8648;MQ=76.50;MQ0=3;MQRankSum=-12.145;QD=24.62;ReadPosRankSum=10.874;VQSLOD=0.0423;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:38:83.50:0,83,2461	0/0:11,0:12:27.96:0,28,701	0/0:34,0:25:38.24:0,38,749	0/0:22,0:16:7.40:0,7,253	0/0:34,0:36:90.30:0,90,2748	1/1:5,8:14:11.60:194,12,0	1/1:3,14:17:29.78:541,30,0	0/0:22,0:31:70.47:0,70,1755	1/1:3,15:19:35.82:637,36,0	1/1:8,15:24:47.55:813,48,0	1/1:8,14:23:13.57:324,14,0	1/1:8,15:24:35.48:677,35,0	0/0:19,0:19:54.18:0,54,1634	0/0:24,0:24:42.14:0,42,1191	1/1:8,19:28:53.68:1004,54,0	1/1:8,12:22:38.54:638,39,0	1/1:7,10:17:17.26:399,17,0	1/1:6,11:17:20.66:380,21,0	1/1:7,4:11:7.62:171,8,0	1/1:9,17:27:4.64:548,5,0	0/1:7,8:17:6.83:49,0,7	1/1:7,13:22:19.07:429,19,0	1/1:6,8:15:17.50:304,18,0	1/1:8,11:20:17.53:303,18,0	1/1:2,13:17:17.85:392,18,0	1/1:10,14:24:38.28:738,38,0	1/1:11,20:32:50.48:944,50,0	1/1:0,7:7:15.05:290,15,0
chr10	57090226	.	TTTTTTTG	T	6209.02	PASS	AB=0.989;AC=26;AF=0.464;AN=56;BaseQRankSum=15.187;DP=573;FS=18.050;HRun=0;HaplotypeScore=153.7748;InbreedingCoeff=-0.0747;MQ=72.11;MQ0=3;MQRankSum=-12.670;QD=17.39;ReadPosRankSum=14.360;VQSLOD=1.0393;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:91.86:0,92,2527	0/0:11,0:11:33.11:0,33,786	0/0:34,0:20:43.11:0,43,746	0/0:23,0:17:15.76:0,16,296	0/0:34,0:34:99:0,99,2664	0/1:13,0:13:53.19:108,0,53	0/1:18,0:18:42.08:325,0,42	0/0:32,0:32:84.18:0,84,1720	1/1:17,0:17:9.03:433,9,0	0/1:25,0:25:99:454,0,130	0/1:23,0:23:99:175,0,164	1/1:18,1:19:5.99:483,6,0	0/0:20,0:19:54.17:0,54,1463	0/0:23,0:23:48.15:0,48,1106	1/1:21,1:22:18.24:684,18,0	1/1:17,0:17:9.48:410,9,0	0/1:15,0:15:57:258,0,57	0/1:15,1:16:87.24:243,0,87	0/1:10,0:10:89.96:90,0,94	0/1:23,0:23:92.70:352,0,93	0/1:17,0:17:10.75:11,0,125	0/1:19,1:20:88.91:277,0,89	0/1:12,0:12:30.06:186,0,30	0/1:18,1:19:84.96:183,0,85	0/1:19,0:19:99:229,0,132	0/1:21,0:20:80.44:438,0,80	1/1:22,1:23:30.01:691,30,0	1/1:8,0:8:0.03:178,0,0
chr10	57091677	.	CGTGT	C	488.87	PASS	AB=0.907;AC=19;AF=0.413;AN=46;BaseQRankSum=1.935;DP=543;FS=0.000;HRun=0;HaplotypeScore=92.7326;InbreedingCoeff=0.3649;MQ=65.66;MQ0=18;MQRankSum=-2.130;QD=2.17;ReadPosRankSum=2.119;VQSLOD=1.3511;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:32,1:32:24.53:25,0,331	0/0:7,0:7:3.01:0,3,53	./.	./.	0/0:11,0:11:3.01:0,3,43	0/0:29,0:29:27.08:0,27,492	0/1:34,0:33:12.38:12,0,244	./.	0/0:13,0:13:0:0,0,0	1/1:14,0:14:1.06:42,1,0	1/1:8,0:8:2.97:25,3,0	0/0:23,0:22:18.06:0,18,374	0/0:9,0:9:5.75:0,6,82	0/0:16,0:18:12.02:0,12,207	1/1:9,2:11:6.02:92,6,0	0/0:27,0:27:18.06:0,18,346	0/1:25,8:35:62.92:172,0,63	1/1:19,0:19:3.01:44,3,0	./.	1/1:13,1:15:6.01:74,6,0	0/0:30,0:29:0.47:0,0,1	0/0:15,0:14:12.04:0,12,222	0/0:10,0:9:9.03:0,9,181	0/0:36,0:39:35.93:0,36,634	1/1:13,0:16:9:77,9,0	1/1:21,0:21:1.03:24,1,0	1/1:13,3:16:3.01:46,3,0	./.
chr10	57091943	.	CA	C	1846.93	PASS	AB=0.943;AC=37;AF=0.661;AN=56;BaseQRankSum=10.682;DP=293;FS=3.071;HRun=1;HaplotypeScore=44.1899;InbreedingCoeff=0.6215;MQ=73.46;MQ0=0;MQRankSum=-2.148;QD=9.10;ReadPosRankSum=2.629;VQSLOD=1.4117;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:57.46:0,57,976	0/0:4,0:4:11.40:0,11,129	0/0:8,0:7:18.04:0,18,218	0/0:9,2:10:2.58:0,3,289	0/0:8,0:8:0.12:0,0,224	1/1:11,0:11:19.83:105,20,0	1/1:14,0:14:30.59:149,31,0	0/0:7,0:7:21.01:0,21,249	1/1:8,2:10:7.53:138,8,0	0/1:9,0:9:5.87:86,0,6	1/1:3,0:3:5.69:45,6,0	1/1:6,0:6:16.41:73,16,0	0/0:15,0:15:42.06:0,42,540	0/0:8,0:8:12.46:0,12,229	1/1:12,0:12:27.37:124,27,0	1/1:8,0:8:22.23:107,22,0	1/1:21,0:21:44.62:218,45,0	1/1:13,0:13:19.06:83,19,0	1/1:4,1:5:5.32:73,5,0	1/1:6,0:6:11.07:54,11,0	1/1:36,0:36:76.24:332,76,0	1/1:5,0:5:13.39:55,13,0	0/1:7,1:8:5.29:60,0,5	0/1:15,1:16:65.09:73,0,65	1/1:1,1:2:5.60:40,6,0	1/1:5,0:5:14.74:95,15,0	1/1:10,0:10:16.88:92,17,0	1/1:3,0:3:8.23:36,8,0
chr10	57091944	.	AC	A	5333.71	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=3.269;DP=289;FS=5.090;HRun=7;HaplotypeScore=32.7004;InbreedingCoeff=0.9199;MQ=73.63;MQ0=0;MQRankSum=-0.610;QD=26.80;ReadPosRankSum=1.900;VQSLOD=4.9623;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:75.63:0,76,977	0/0:4,0:4:11.71:0,12,137	0/0:8,0:7:15.05:0,15,210	0/0:11,0:10:15.97:0,16,321	0/0:7,0:7:16.96:0,17,250	1/1:0,11:11:21.06:249,21,0	1/1:0,14:14:33.10:387,33,0	0/0:7,0:7:18.05:0,18,234	1/1:5,4:9:23.22:233,23,0	1/1:1,8:9:21.06:251,21,0	1/1:0,3:3:6.02:71,6,0	1/1:0,6:6:18.06:216,18,0	0/0:15,0:15:42.14:0,42,584	0/0:9,0:9:26.56:0,27,324	1/1:0,12:12:30.09:360,30,0	1/1:0,8:8:24.07:288,24,0	1/1:0,21:21:48.15:576,48,0	1/1:0,13:13:21.06:252,21,0	1/1:2,3:5:11.86:106,12,0	1/1:0,6:6:12.04:144,12,0	1/1:0,35:35:84.26:1008,84,0	1/1:0,5:5:15.05:180,15,0	1/1:1,6:7:18.06:216,18,0	1/1:4,11:15:21.04:252,21,0	1/1:1,1:2:6.02:72,6,0	1/1:1,4:5:14.95:150,15,0	1/1:0,10:10:18.05:215,18,0	1/1:0,3:3:9.03:108,9,0
chr10	57093212	.	C	CT	6644.83	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=9.140;DP=430;FS=3.856;HRun=6;HaplotypeScore=147.1516;InbreedingCoeff=0.9764;MQ=76.00;MQ0=0;MQRankSum=-12.857;QD=23.15;ReadPosRankSum=1.542;VQSLOD=3.0778;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:84.16:0,84,845	0/0:9,0:9:21.04:0,21,213	0/0:13,0:12:26.09:0,26,247	0/0:20,0:19:36.90:0,37,311	0/0:12,0:12:33.07:0,33,336	1/1:2,15:17:33.11:413,33,0	1/1:4,9:13:18.01:206,18,0	0/0:20,0:20:42.07:0,42,418	1/1:3,15:18:44.81:540,45,0	1/1:1,4:5:15.05:186,15,0	1/1:2,5:7:9.03:107,9,0	1/1:5,19:24:33.11:414,33,0	0/0:14,0:14:39.05:0,39,387	0/0:25,0:25:75.16:0,75,758	1/1:4,12:16:27.06:314,27,0	1/1:1,11:12:27.09:339,27,0	1/1:5,19:24:29.06:323,29,0	1/1:4,14:18:33.11:414,33,0	1/1:7,17:24:54.11:632,54,0	1/1:0,9:9:27.01:309,27,0	1/1:2,9:11:21.03:236,21,0	1/1:0,6:6:12.04:150,12,0	1/1:2,8:10:19.53:191,20,0	1/1:3,14:17:31.91:382,32,0	1/1:1,15:16:39.96:461,40,0	1/1:8,10:18:36.11:440,36,0	1/1:4,11:15:30.08:359,30,0	1/1:1,6:7:18.06:228,18,0
chr10	57093222	.	C	CGGAGAGGAATGCTTGTAGCA	72229.45	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=4.031;DP=492;FS=3.996;HRun=0;HaplotypeScore=264.2585;InbreedingCoeff=0.9947;MQ=67.87;MQ0=0;MQRankSum=-14.573;QD=202.32;ReadPosRankSum=2.166;VQSLOD=4.4190;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:81.25:0,81,4422	0/0:9,0:9:27.08:0,27,1163	0/0:9,0:9:17.82:0,18,620	0/0:19,0:19:37.96:0,38,1240	0/0:14,0:14:42.14:0,42,2148	1/1:16,5:21:57.17:3799,57,0	1/1:19,1:20:57.18:4700,57,0	0/0:17,0:17:45.12:0,45,1595	1/1:10,9:19:57.20:4338,57,0	1/1:7,4:11:30.10:2126,30,0	1/1:6,2:8:21.07:1372,21,0	1/1:23,7:30:84.28:6645,84,0	0/0:16,0:16:48.15:0,48,2165	0/0:24,0:24:72.23:0,72,3658	1/1:14,5:19:57.20:4531,57,0	1/1:15,5:20:57.20:4830,57,0	1/1:23,2:25:57.18:4095,57,0	1/1:10,6:16:42.14:3237,42,0	1/1:17,4:21:63.17:4233,63,0	1/1:7,5:13:33.11:2766,33,0	1/1:11,3:14:30.09:1647,30,0	1/1:5,3:8:15.04:1174,15,0	1/1:8,5:13:36.12:2782,36,0	1/1:21,5:26:57.16:3762,57,0	1/1:15,9:24:69.24:5536,69,0	1/1:12,4:16:48.16:3412,48,0	1/1:17,6:23:69.24:5192,69,0	1/1:7,3:10:30.10:2052,30,0
chr10	57094259	.	G	GGTGTGTGT	3406.63	PASS	AB=0.948;AC=38;AF=0.704;AN=54;BaseQRankSum=2.760;DP=658;FS=0.752;HRun=0;HaplotypeScore=200.7355;InbreedingCoeff=0.5019;MQ=60.91;MQ0=42;MQRankSum=-5.105;QD=7.20;ReadPosRankSum=-1.983;VQSLOD=1.8994;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:44:45.02:0,45,946	1/1:3,0:3:3.01:37,3,0	./.	0/1:63,0:20:0:0,0,0	0/0:19,0:20:15.05:0,15,327	1/1:16,0:18:17.97:464,18,0	1/1:24,0:23:6.02:147,6,0	0/1:23,0:22:0:0,0,0	1/1:17,1:23:17.59:436,18,0	1/1:17,0:16:18.03:379,18,0	0/1:14,0:14:0:0,0,0	0/1:21,1:23:7.15:140,0,7	0/0:25,0:25:27.01:0,27,498	0/0:21,0:23:36.01:0,36,806	1/1:24,0:25:11.45:316,11,0	1/1:19,3:22:2.46:261,2,0	1/1:19,0:19:1.55:4,2,0	0/1:18,0:23:1.14:86,0,1	1/1:18,0:17:9.03:167,9,0	1/1:8,0:7:2.81:106,3,0	1/1:26,0:22:0.27:0,0,0	0/1:14,0:13:0.07:0,0,0	0/0:16,0:16:0:0,0,1	1/1:24,0:24:6.17:88,6,0	1/1:15,0:15:0.26:1,0,0	1/1:22,0:20:23.26:377,23,0	1/1:23,8:31:9.72:239,10,0	1/1:12,0:12:6.02:156,6,0
chr10	57094302	.	A	AAGAGAGAGAG	9742.79	PASS	AB=1.000;AC=43;AF=0.768;AN=56;BaseQRankSum=1.201;DP=493;FS=0.644;HRun=0;HaplotypeScore=161.1902;InbreedingCoeff=0.6229;MQ=56.39;MQ0=12;MQRankSum=-6.908;QD=27.84;ReadPosRankSum=-4.316;VQSLOD=3.3760;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:37:51.14:0,51,1430	1/1:6,0:5:5.98:70,6,0	0/1:15,0:11:9.20:9,0,234	0/0:24,0:17:18.63:0,19,555	0/0:20,0:21:30.05:0,30,723	1/1:10,1:19:2.08:93,2,0	1/1:14,0:13:11.78:331,12,0	1/1:27,0:22:51.12:1425,51,0	1/1:14,8:25:8.77:315,9,0	1/1:6,4:16:33.05:856,33,0	1/1:4,8:16:6.02:247,6,0	1/1:19,0:21:22.61:475,23,0	0/0:20,0:20:32.89:0,33,939	0/0:22,0:22:26.84:0,27,664	0/0:11,3:15:1.65:0,2,5	1/1:10,2:17:5.06:210,5,0	1/1:5,0:16:12.04:420,12,0	1/1:17,0:17:18.01:562,18,0	1/1:3,1:9:18.95:724,19,0	1/1:5,1:11:8.84:257,9,0	1/1:7,2:14:1.43:120,1,0	1/1:6,0:10:4.62:159,5,0	1/1:7,0:12:5.76:130,6,0	1/1:10,0:21:5.82:177,6,0	1/1:2,2:7:3.01:130,3,0	1/1:6,10:17:38.49:1497,38,0	1/1:20,0:21:44.84:1297,45,0	1/1:5,1:8:8.62:236,9,0
chr10	57094454	.	C	CTT	4899.01	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-8.139;DP=487;FS=6.927;HRun=10;HaplotypeScore=65.6192;InbreedingCoeff=0.9873;MQ=62.87;MQ0=4;MQRankSum=1.273;QD=27.52;ReadPosRankSum=-0.536;VQSLOD=4.5404;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:92.42:0,92,895	0/0:6,0:6:12:0,12,115	0/0:19,0:18:24.52:0,25,249	0/0:15,0:10:20.81:0,21,178	0/0:21,0:21:45.06:0,45,458	0/0:13,0:13:27.04:0,27,275	0/0:7,0:7:17.98:0,18,172	0/0:37,0:36:72.02:0,72,716	1/1:7,13:21:36.12:527,36,0	1/1:2,15:16:36.10:516,36,0	1/1:1,13:16:39.04:515,39,0	0/0:11,0:9:15.02:0,15,153	0/0:9,0:9:21.03:0,21,213	0/0:14,0:14:39.06:0,39,396	1/1:5,12:17:36.12:528,36,0	0/0:15,0:16:32.79:0,33,316	0/0:21,0:19:38.60:0,39,385	0/0:31,0:31:72.15:0,72,731	1/1:2,8:11:24.07:333,24,0	1/1:5,15:21:41.63:575,42,0	1/1:5,8:13:17.97:219,18,0	0/0:13,0:12:33.07:0,33,336	0/0:16,0:16:36.02:0,36,366	0/0:10,0:11:26.49:0,26,226	1/1:4,13:17:27.09:403,27,0	1/1:6,15:21:39.11:558,39,0	1/1:2,10:13:32.90:457,33,0	1/1:3,6:9:18.06:268,18,0
chr10	57094991	.	C	CA	367.82	PASS	AB=0.850;AC=21;AF=0.875;AN=24;BaseQRankSum=0.375;DP=56;FS=2.269;HRun=0;HaplotypeScore=59.2044;InbreedingCoeff=-0.0594;MQ=147.14;MQ0=1;MQRankSum=-0.853;QD=7.66;ReadPosRankSum=0.239;VQSLOD=3.4157;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,1:2:2.52:24,3,0	1/1:0,1:1:2.22:7,2,0	0/1:7,0:5:9.53:19,0,10	0/1:18,1:15:6.63:63,0,7	1/1:2,2:4:5.99:49,6,0	./.	./.	./.	1/1:0,1:2:5.97:50,6,0	1/1:1,1:2:6.01:60,6,0	./.	0/1:1,1:3:0:0,0,0	1/1:0,4:4:8.76:75,9,0	./.	./.	./.	./.	./.	1/1:1,0:1:3:27,3,0	./.	./.	./.	./.	./.	./.	./.	1/1:1,1:2:5.85:47,6,0	1/1:0,1:1:3:27,3,0
chr10	57095009	.	CAGAGAGAGAGAG	C	1362.72	PASS	AB=0.861;AC=18;AF=0.391;AN=46;BaseQRankSum=2.745;DP=319;FS=9.605;HRun=0;HaplotypeScore=115.5472;InbreedingCoeff=0.4415;MQ=61.98;MQ0=6;MQRankSum=-0.744;QD=13.23;ReadPosRankSum=0.012;VQSLOD=1.6339;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:11.99:0,12,468	./.	./.	0/0:27,0:14:2.03:0,2,5	0/0:9,0:10:9.03:0,9,414	0/0:8,0:9:2.71:0,3,63	./.	./.	1/1:6,0:7:3.01:75,3,0	1/1:9,3:12:9.03:254,9,0	./.	0/0:11,0:13:9.50:0,9,116	0/0:10,0:12:15.52:0,16,712	0/0:6,0:6:4.26:0,4,166	1/1:10,9:20:9.03:304,9,0	0/1:8,1:13:45.40:97,0,45	0/0:7,0:7:3.01:0,3,32	0/0:7,0:10:6.02:0,6,163	1/1:11,1:13:9.03:289,9,0	0/0:8,2:11:3.83:0,4,20	0/1:5,0:5:0:0,0,0	0/0:11,0:12:3.01:0,3,35	0/0:8,0:13:3.01:0,3,71	0/0:11,0:13:3.01:0,3,71	1/1:4,2:7:3.01:77,3,0	1/1:6,2:8:3.01:103,3,0	1/1:11,2:13:6.02:205,6,0	1/1:3,2:5:3.01:103,3,0
chr10	57095840	.	AG	A	7555.23	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=14.714;DP=772;FS=1.666;HRun=5;HaplotypeScore=76.2253;InbreedingCoeff=0.9999;MQ=88.02;MQ0=0;MQRankSum=-2.974;QD=29.86;ReadPosRankSum=4.212;VQSLOD=5.4208;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:93.28:0,93,1239	0/0:13,0:13:33.08:0,33,432	0/0:29,0:29:72.15:0,72,952	0/0:25,0:25:61.08:0,61,822	0/0:33,0:33:87.27:0,87,1169	1/1:3,28:31:78.22:885,78,0	1/1:2,28:30:81.23:919,81,0	0/0:33,0:33:84.25:0,84,1116	0/0:30,0:30:81.27:0,81,1107	0/0:33,0:33:96.31:0,96,1299	0/0:23,0:23:60.20:0,60,815	1/1:2,19:21:51.14:579,51,0	0/0:21,0:21:63.18:0,63,831	0/0:31,0:31:84.27:0,84,1133	0/0:31,0:31:93.31:0,93,1272	1/1:2,22:24:63.18:715,63,0	1/1:2,30:32:87.25:987,87,0	1/1:0,25:25:75.21:851,75,0	0/0:15,0:15:36.12:0,36,486	0/0:32,0:32:90.25:0,90,1168	0/0:34,0:34:96.29:0,96,1274	1/1:0,27:27:72.21:817,72,0	1/1:0,31:31:78.17:885,78,0	1/1:3,29:32:81.23:919,81,0	0/0:31,0:31:93.30:0,93,1256	0/0:32,0:32:87.28:0,87,1175	0/0:29,0:29:81.26:0,81,1092	0/0:11,0:11:33.11:0,33,451
chr10	57096390	.	T	TTCTCTCTC	4735.57	PASS	AC=34;AF=0.773;AN=44;BaseQRankSum=2.105;DP=545;FS=23.620;HRun=0;HaplotypeScore=144.6692;InbreedingCoeff=0.7844;MQ=60.63;MQ0=13;MQRankSum=-4.088;QD=14.05;ReadPosRankSum=-1.511;VQSLOD=2.3385;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:38.84:0,39,538	1/1:8,0:8:12.50:174,12,0	./.	0/0:24,0:14:6.02:0,6,129	0/0:22,0:22:14.89:0,15,197	1/1:23,0:22:18.06:536,18,0	1/1:27,0:22:16.47:342,16,0	1/1:35,0:32:18.04:230,18,0	1/1:14,0:13:9.03:259,9,0	1/1:17,0:16:12.51:230,13,0	./.	1/1:14,0:19:3.01:72,3,0	0/0:15,0:15:21:0,21,515	0/0:13,0:13:15.04:0,15,325	1/1:21,0:19:6.49:119,6,0	1/1:13,0:12:9.03:191,9,0	1/1:15,0:14:14.10:412,14,0	1/1:12,0:14:16.30:439,16,0	1/1:25,0:23:17.25:279,17,0	./.	./.	./.	1/1:14,0:14:9.03:210,9,0	./.	1/1:25,0:25:18.06:508,18,0	1/1:25,0:24:30.95:581,31,0	1/1:23,0:23:7.38:146,7,0	1/1:14,0:10:3.06:8,3,0
chr10	57096426	.	CTG	C	507.93	PASS	AB=0.893;AC=25;AF=0.481;AN=52;BaseQRankSum=5.235;DP=472;FS=29.068;HRun=0;HaplotypeScore=98.2262;InbreedingCoeff=0.7187;MQ=42.08;MQ0=26;MQRankSum=0.595;QD=2.53;ReadPosRankSum=-1.440;VQSLOD=0.3634;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:36:10.28:0,10,199	1/1:5,0:7:2.84:14,3,0	./.	./.	0/0:18,0:17:8.90:0,9,65	0/0:20,0:19:8.36:0,8,56	0/0:30,0:24:23.41:0,23,157	1/1:25,0:22:2.68:11,3,0	1/1:10,1:9:8.69:48,9,0	1/1:15,0:12:17.48:100,17,0	1/1:14,0:13:11.77:70,12,0	0/0:20,0:19:11.91:0,12,91	0/0:14,0:14:11.90:0,12,106	0/0:20,0:19:23.65:0,24,192	0/1:22,3:21:0.63:65,0,1	0/0:14,0:13:11.97:0,12,97	0/0:23,0:20:26.85:0,27,213	0/0:18,0:13:8.47:0,8,98	1/1:7,0:6:8.80:53,9,0	1/1:10,1:8:5.80:32,6,0	1/1:10,0:7:2.49:17,2,0	0/0:20,0:20:11.98:0,12,97	0/0:14,0:13:5.99:0,6,50	0/0:17,0:15:5.95:0,6,43	1/1:20,0:20:5.70:35,6,0	1/1:27,0:25:15.06:85,15,0	1/1:19,1:20:20.16:123,20,0	1/1:8,0:5:5.94:41,6,0
chr10	57096849	.	GT	G	5995.19	PASS	AB=0.943;AC=23;AF=0.411;AN=56;BaseQRankSum=-1.977;DP=713;FS=5.310;HRun=9;HaplotypeScore=148.0287;InbreedingCoeff=0.9217;MQ=67.41;MQ0=6;MQRankSum=0.548;QD=20.39;ReadPosRankSum=0.608;VQSLOD=3.4658;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,112,1224	0/0:6,0:6:12.04:0,12,138	0/1:30,2:21:36.94:37,0,235	0/0:34,0:19:39.07:0,39,418	0/0:24,0:24:62.89:0,63,678	0/0:3,0:23:42.77:0,43,222	0/0:8,0:23:27.58:0,28,156	0/0:31,0:30:81.18:0,81,904	1/1:1,22:23:57.03:521,57,0	1/1:2,26:28:78.01:707,78,0	1/1:1,20:21:57.02:522,57,0	0/0:4,0:22:34.15:0,34,204	0/0:22,0:22:59.89:0,60,636	0/0:15,0:15:42.12:0,42,485	1/1:5,27:31:69.04:631,69,0	0/0:6,0:26:45.46:0,45,232	0/0:5,0:37:76.68:0,77,394	0/0:5,0:39:71.42:0,71,382	1/1:2,15:17:44.96:396,45,0	1/1:1,27:28:74.98:676,75,0	1/1:2,16:18:44.94:401,45,0	0/0:5,0:22:28.93:0,29,219	0/0:1,0:29:62.45:0,62,316	0/0:5,0:22:56.89:0,57,292	1/1:0,15:15:45.02:412,45,0	1/1:4,33:36:67.44:871,67,0	1/1:2,20:22:41.85:384,42,0	1/1:2,18:19:48.01:439,48,0
chr10	57096881	.	T	TG	2085.18	PASS	AB=1.000;AC=37;AF=0.661;AN=56;BaseQRankSum=3.631;DP=694;FS=22.172;HRun=0;HaplotypeScore=168.4731;InbreedingCoeff=0.3203;MQ=58.54;MQ0=14;MQRankSum=3.722;QD=4.04;ReadPosRankSum=-2.964;VQSLOD=1.6048;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:46:99:0,105,1132	1/1:0,3:3:3.01:37,3,0	0/0:36,0:10:12.45:0,12,126	0/0:24,0:6:13.56:0,14,110	0/0:29,0:28:74.22:0,74,761	1/1:21,0:21:0.79:75,1,0	1/1:16,0:16:5.43:43,5,0	1/1:2,28:30:81.18:857,81,0	1/1:28,0:28:4.65:45,5,0	1/1:30,0:30:31.65:170,32,0	0/1:23,0:23:0.45:61,0,0	1/1:17,0:17:15.10:114,15,0	0/0:28,0:28:76.82:0,77,756	0/0:14,0:14:35.04:0,35,337	1/1:32,0:31:9.80:93,10,0	0/1:23,0:23:15.70:34,0,16	0/1:40,0:39:3.21:3,0,53	0/1:35,0:35:21.53:76,0,22	1/1:15,0:14:16.46:78,16,0	0/1:27,0:27:19:31,0,19	1/1:17,0:15:1.15:41,1,0	1/1:22,0:22:1.99:91,2,0	0/1:33,0:33:8.33:110,0,8	0/1:21,0:21:4.34:40,0,4	1/1:19,0:19:2.53:32,3,0	1/1:34,0:33:24.21:145,24,0	1/1:18,0:17:3.21:37,3,0	1/1:12,0:12:5.49:46,5,0
chr10	57097362	.	TCATTATAATGC	T	17174.67	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=13.130;DP=464;FS=2.009;HRun=0;HaplotypeScore=159.7374;InbreedingCoeff=0.9192;MQ=70.29;MQ0=0;MQRankSum=-12.630;QD=55.40;ReadPosRankSum=1.710;VQSLOD=4.7766;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,99,5263	0/0:9,0:9:27.09:0,27,1350	0/0:11,0:12:8.82:0,9,155	0/0:8,0:9:6.02:0,6,100	0/0:27,0:27:54.19:0,54,2648	1/1:8,16:24:33.11:1104,33,0	1/1:7,12:19:24.08:741,24,0	0/0:29,0:29:54.19:0,54,2757	1/1:5,11:16:24.08:801,24,0	1/1:6,10:16:33.11:1104,33,0	1/1:4,9:13:21.03:621,21,0	1/1:7,10:17:27.09:903,27,0	0/0:17,0:17:45.14:0,45,2223	0/0:15,0:15:42.14:0,42,2331	1/1:6,16:22:39.13:1305,39,0	1/1:7,20:27:57.20:1907,57,0	1/1:6,13:19:30.10:1004,30,0	1/1:5,4:9:9.03:301,9,0	1/1:8,8:16:24.05:707,24,0	1/1:6,10:16:33.08:837,33,0	1/1:7,7:14:11.94:390,12,0	1/1:1,3:4:9.03:301,9,0	1/1:3,8:12:24.08:801,24,0	1/1:4,5:9:4.88:199,5,0	1/1:3,17:20:42.14:1403,42,0	1/1:4,13:17:39.13:1239,39,0	1/1:3,11:14:33.11:1104,33,0	1/1:2,4:6:12.04:402,12,0
chr10	57099130	.	CA	C	14686.73	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=8.922;DP=689;FS=0.314;HRun=3;HaplotypeScore=74.4483;InbreedingCoeff=0.9989;MQ=70.52;MQ0=0;MQRankSum=-2.545;QD=32.00;ReadPosRankSum=4.375;VQSLOD=4.9285;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,124,1769	0/0:13,0:13:36.12:0,36,518	0/0:34,0:28:63.15:0,63,886	0/0:28,0:24:59.89:0,60,786	0/0:24,0:24:72.24:0,72,1029	1/1:1,26:27:66.21:818,66,0	1/1:1,23:24:54.17:665,54,0	0/0:36,0:36:99:0,102,1443	1/1:0,16:16:45.14:558,45,0	1/1:1,30:31:90.28:1113,90,0	1/1:0,13:13:30.09:372,30,0	1/1:0,23:23:60.19:744,60,0	0/0:27,0:27:78.23:0,78,1079	0/0:24,0:24:71.26:0,71,977	1/1:2,24:26:63.20:781,63,0	1/1:3,25:28:63.20:781,63,0	1/1:0,28:28:60.19:744,60,0	1/1:1,22:23:26.87:742,27,0	1/1:1,14:15:42.13:519,42,0	1/1:0,22:22:60.19:741,60,0	1/1:1,34:35:96.30:1190,96,0	1/1:0,26:26:72.23:889,72,0	1/1:1,23:24:60.19:742,60,0	1/1:2,25:27:29.15:812,29,0	1/1:0,16:16:48.15:595,48,0	1/1:0,24:24:72.21:878,72,0	1/1:1,21:22:60.19:744,60,0	1/1:0,9:9:21.07:260,21,0
chr10	57099392	.	T	TTGTG	2898.48	PASS	AB=0.907;AC=41;AF=0.820;AN=50;BaseQRankSum=1.108;DP=717;FS=17.373;HRun=0;HaplotypeScore=136.9555;InbreedingCoeff=0.1846;MQ=57.22;MQ0=11;MQRankSum=-2.618;QD=4.89;ReadPosRankSum=-3.010;VQSLOD=0.6479;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:14.26:0,14,194	1/1:5,6:13:12.04:268,12,0	./.	./.	./.	0/1:21,0:22:9.96:100,0,10	1/1:21,0:25:10.98:49,11,0	1/1:30,0:30:11.13:85,11,0	1/1:11,1:26:5.60:104,6,0	1/1:22,0:21:13.85:155,14,0	1/1:10,0:10:3.01:68,3,0	0/1:20,0:29:25.39:25,0,35	0/0:23,0:23:9.85:0,10,113	0/1:15,0:15:7.62:8,0,141	1/1:19,12:37:11.77:224,12,0	1/1:10,15:28:11.97:281,12,0	0/1:36,0:39:99:213,0,112	1/1:25,0:36:26.13:135,26,0	1/1:26,0:24:8.97:72,9,0	1/1:17,8:30:8.77:153,9,0	1/1:41,16:61:5.67:82,6,0	1/1:13,0:17:2.74:12,3,0	1/1:13,0:20:5.27:24,5,0	0/1:30,0:37:99:115,0,102	1/1:20,0:20:24.02:294,24,0	1/1:21,0:21:10.85:136,11,0	1/1:13,0:13:24.04:300,24,0	1/1:7,4:11:6.02:141,6,0
chr10	57100429	.	CATTTATTTATTTATTTATTTATTT	C	5927.76	PASS	AC=36;AF=0.692;AN=52;BaseQRankSum=7.141;DP=256;FS=16.344;HRun=0;HaplotypeScore=146.7072;InbreedingCoeff=0.5846;MQ=75.28;MQ0=1;MQRankSum=-4.651;QD=37.05;ReadPosRankSum=3.291;VQSLOD=2.9235;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:24.07:0,24,1431	0/0:4,0:6:12.04:0,12,695	0/0:9,0:9:3.01:0,3,42	0/0:7,0:5:2.37:0,2,8	0/0:10,0:10:15.05:0,15,1372	1/1:4,5:9:9.03:562,9,0	1/1:6,0:6:3.01:33,3,0	0/0:22,0:20:42.14:0,42,2476	1/1:5,5:10:6.02:378,6,0	1/1:6,8:14:21.06:699,21,0	1/1:6,4:10:6.02:372,6,0	1/1:4,3:6:3.01:169,3,0	0/0:9,0:9:9.03:0,9,915	0/0:7,0:7:3.01:0,3,333	1/1:3,4:7:6.02:378,6,0	1/1:1,2:3:3.01:189,3,0	1/1:6,0:6:3.01:32,3,0	1/1:9,4:13:3.01:189,3,0	1/1:10,4:14:12.04:602,12,0	1/1:4,4:8:9.03:253,9,0	1/1:5,0:5:3.01:37,3,0	./.	1/1:5,2:7:3.01:189,3,0	./.	1/1:6,4:10:6.02:378,6,0	1/1:10,7:17:15.03:341,15,0	1/1:4,3:7:5.60:377,6,0	1/1:3,4:7:12.04:752,12,0
chr10	57101287	.	TC	T	6974.39	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=1.913;DP=476;FS=4.502;HRun=10;HaplotypeScore=56.9968;InbreedingCoeff=0.9750;MQ=79.28;MQ0=0;MQRankSum=-3.224;QD=19.76;ReadPosRankSum=3.776;VQSLOD=5.8410;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,1:26:25.05:0,25,504	0/0:7,0:7:12.03:0,12,133	0/0:15,0:13:23.54:0,24,215	0/0:21,0:21:14.17:0,14,193	0/0:16,0:16:36.10:0,36,398	1/1:4,21:25:59.98:521,60,0	1/1:8,16:24:35.96:313,36,0	0/0:23,0:23:36.10:0,36,398	1/1:2,17:19:44.99:391,45,0	1/1:2,15:18:47.03:396,47,0	1/1:0,14:14:38.99:338,39,0	1/1:1,9:10:26.99:234,27,0	0/0:8,0:8:16.99:0,17,226	0/0:7,0:7:21.04:0,21,223	1/1:1,23:24:43.42:524,43,0	1/1:0,17:17:47.99:417,48,0	1/1:3,23:26:53.98:469,54,0	1/1:5,15:20:44.98:391,45,0	1/1:7,10:17:29.98:260,30,0	1/1:0,17:17:38.97:335,39,0	1/1:2,5:7:15:130,15,0	1/1:2,18:20:47.98:417,48,0	1/1:3,13:16:8.99:306,9,0	1/1:3,11:14:26.99:234,27,0	1/1:2,10:12:23.99:208,24,0	1/1:7,17:24:53.97:466,54,0	1/1:0,17:17:44.99:391,45,0	1/1:2,10:12:26.99:234,27,0
chr10	57101539	.	A	AG	12199.39	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=9.301;DP=543;FS=3.119;HRun=6;HaplotypeScore=82.5411;InbreedingCoeff=0.9452;MQ=71.59;MQ0=0;MQRankSum=-2.535;QD=29.05;ReadPosRankSum=2.055;VQSLOD=5.5908;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:96.17:0,96,967	1/1:2,3:5:9.03:113,9,0	0/0:24,0:21:34.53:0,35,343	0/0:12,0:12:3.54:0,4,132	0/0:16,0:16:48.09:0,48,482	1/1:1,20:21:51.16:641,51,0	1/1:3,19:22:48.15:604,48,0	1/1:3,24:27:63.20:787,63,0	1/1:3,16:19:45.14:565,45,0	1/1:1,14:15:42.12:514,42,0	1/1:1,7:8:15.05:189,15,0	1/1:1,17:18:42.13:528,42,0	0/0:19,0:19:51.11:0,51,519	0/0:16,0:16:42.09:0,42,427	1/1:0,22:22:60.19:755,60,0	1/1:3,25:28:66.21:830,66,0	1/1:2,19:21:51.16:642,51,0	1/1:1,22:23:54.17:679,54,0	1/1:2,11:13:30.10:377,30,0	1/1:2,14:16:30.10:377,30,0	1/1:5,39:44:99:1283,102,0	1/1:8,15:23:42.13:528,42,0	1/1:1,20:21:48.15:603,48,0	1/1:1,18:19:39.12:491,39,0	1/1:0,15:15:42.13:528,42,0	1/1:5,19:24:57.18:715,57,0	1/1:2,8:10:24.08:302,24,0	1/1:1,5:6:12.04:151,12,0
chr10	57102919	.	G	GA	123.87	PASS	AB=1.000;AC=21;AF=0.955;AN=22;DP=28;FS=0.000;HRun=0;HaplotypeScore=22.5992;InbreedingCoeff=0.1161;MQ=29.71;MQ0=0;QD=5.90;VQSLOD=2.8522;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	./.	1/1:1,0:1:2.94:18,3,0	./.	./.	1/1:0,3:3:3:28,3,0	1/1:3,1:4:7.21:47,7,0	./.	1/1:3,0:3:3.84:21,4,0	./.	1/1:1,0:1:2.80:13,3,0	./.	1/1:1,0:1:1.55:4,2,0	./.	1/1:3,0:3:2.44:6,2,0	./.	./.	./.	1/1:1,0:1:2.84:14,3,0	1/1:1,0:1:2.92:17,3,0	0/1:1,0:1:0:0,0,0	./.	1/1:2,0:2:5.01:27,5,0	./.	./.
chr10	57104395	.	C	CGGA	2833.72	PASS	AB=0.750;AC=40;AF=0.741;AN=54;BaseQRankSum=-5.471;DP=179;FS=4.864;HRun=0;HaplotypeScore=23.0538;InbreedingCoeff=0.6371;MQ=80.33;MQ0=1;MQRankSum=-4.686;QD=22.85;ReadPosRankSum=3.556;VQSLOD=2.4825;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:16:41.64:0,42,524	0/1:6,0:6:6.22:7,0,6	0/0:9,0:8:17.98:0,18,240	0/0:6,0:6:14.62:0,15,170	0/0:4,0:4:6.49:0,6,84	1/1:0,6:6:12.04:200,12,0	1/1:0,6:6:9.03:108,9,0	1/1:8,0:7:3:27,3,0	1/1:0,3:3:3.01:55,3,0	1/1:0,4:4:12.04:271,12,0	1/1:1,4:5:9.49:115,9,0	1/1:0,7:7:15.05:218,15,0	0/0:5,0:5:12.04:0,12,151	0/0:8,0:8:17.99:0,18,220	1/1:0,8:8:9.03:125,9,0	1/1:0,8:8:5.98:75,6,0	1/1:0,9:10:9.03:165,9,0	1/1:0,3:4:3.01:40,3,0	1/1:1,6:8:21.06:387,21,0	1/1:1,4:6:11.98:129,12,0	1/1:7,0:7:15.01:189,15,0	./.	1/1:3,0:3:6.02:100,6,0	0/1:0,5:4:0:0,0,0	1/1:0,4:6:6.02:108,6,0	1/1:0,8:8:24.08:545,24,0	1/1:0,3:4:3.01:58,3,0	1/1:0,2:2:6.01:86,6,0
chr10	57106668	.	CTT	C	4737.22	PASS	AB=0.730;AC=42;AF=0.750;AN=56;BaseQRankSum=-1.359;DP=467;FS=0.529;HRun=15;HaplotypeScore=69.7899;InbreedingCoeff=0.5594;MQ=65.85;MQ0=5;MQRankSum=0.896;QD=12.12;ReadPosRankSum=3.429;VQSLOD=3.8836;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,2:32:12.19:0,12,614	1/1:3,4:7:8.97:79,9,0	0/1:15,1:13:33.15:33,0,87	0/0:12,0:10:12.26:0,12,65	0/0:13,0:14:28.82:0,29,306	1/1:9,7:19:4.45:165,4,0	1/1:3,13:16:35.95:317,36,0	1/1:11,9:21:26.48:213,26,0	1/1:5,10:16:20.80:229,21,0	1/1:6,13:21:41.23:320,41,0	0/1:7,5:15:3.61:109,0,4	1/1:5,12:17:29.66:250,30,0	0/0:4,0:4:3.48:0,3,42	0/0:12,0:12:22.77:0,23,216	1/1:3,6:10:14.64:117,15,0	1/1:4,6:11:17.64:144,18,0	1/1:10,14:24:5.26:281,5,0	1/1:8,15:25:20.72:329,21,0	0/1:13,12:26:5.28:285,0,5	1/1:10,9:19:17.74:158,18,0	1/1:2,5:8:11.96:106,12,0	1/1:1,8:10:26.73:223,27,0	0/1:8,5:16:8.24:127,0,8	1/1:9,9:17:17.38:202,17,0	1/1:4,9:13:20.93:185,21,0	1/1:9,14:22:35.73:316,36,0	1/1:4,16:18:19.61:321,20,0	1/1:3,10:15:28.28:228,28,0
chr10	57107169	.	TCACACACACACACACA	T	3091.48	PASS	AB=0.806;AC=12;AF=0.240;AN=50;BaseQRankSum=5.986;DP=504;FS=13.246;HRun=0;HaplotypeScore=194.6516;InbreedingCoeff=0.4651;MQ=57.71;MQ0=18;MQRankSum=-5.526;QD=19.82;ReadPosRankSum=0.293;VQSLOD=1.8686;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:26.26:0,26,852	./.	./.	0/0:42,0:27:9.03:0,9,170	0/0:8,0:13:24.08:0,24,735	0/1:11,15:26:16.79:837,0,17	0/1:20,5:25:90:454,0,90	0/0:24,0:24:25.63:0,26,1035	0/0:11,0:13:27.09:0,27,1237	0/0:19,0:19:33.11:0,33,1753	0/0:17,0:17:18.02:0,18,778	1/1:3,10:13:14.13:528,14,0	0/0:14,0:14:21.05:0,21,1248	0/0:6,0:6:9.03:0,9,539	0/0:17,0:18:15.03:0,15,915	1/1:7,2:9:3.01:132,3,0	0/1:21,3:24:11.48:11,0,98	0/1:11,2:13:99:297,0,290	0/0:9,0:9:9.03:0,9,598	0/0:8,0:8:18.05:0,18,867	0/0:25,0:25:39.13:0,39,1974	./.	1/1:15,3:18:12.73:481,13,0	1/1:21,7:27:12.51:508,13,0	0/0:10,0:10:12.04:0,12,803	0/0:14,0:14:31.35:0,31,1735	0/0:15,0:15:27.09:0,27,1794	0/0:11,0:10:24.06:0,24,1309
chr10	57107480	.	C	CT	2684.97	PASS	AB=0.676;AC=23;AF=0.411;AN=56;BaseQRankSum=-6.700;DP=593;FS=14.072;HRun=13;HaplotypeScore=71.2824;InbreedingCoeff=0.5229;MQ=56.55;MQ0=13;MQRankSum=-4.217;QD=9.10;ReadPosRankSum=-0.830;VQSLOD=0.9315;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,2:38:66.03:0,66,586	1/1:2,3:5:6.01:56,6,0	0/0:20,0:8:5.87:0,6,40	0/0:14,0:5:1.97:0,2,27	0/1:20,2:25:1.69:2,0,247	0/0:18,0:21:24.28:0,24,254	0/0:20,0:19:29.89:0,30,251	0/1:13,12:25:29.31:195,0,29	1/1:4,12:16:27.03:249,27,0	1/1:13,10:23:18.39:298,18,0	0/1:7,9:16:9.25:131,0,9	0/0:16,0:17:45.69:0,46,299	0/0:18,0:18:36.07:0,36,247	0/0:8,0:10:18.88:0,19,114	0/1:8,15:22:25.67:215,0,26	0/0:23,1:25:39.60:0,40,408	0/0:30,1:32:37.70:0,38,380	0/0:15,1:16:7.85:0,8,197	1/1:16,16:31:33.94:398,34,0	1/1:6,12:21:3.07:139,3,0	1/1:11,20:30:6.89:347,7,0	0/0:15,0:16:13.08:0,13,225	0/0:22,0:22:44.53:0,45,306	0/0:24,1:27:23.57:0,24,308	1/1:4,11:15:5.40:152,5,0	1/1:10,15:26:10.72:283,11,0	1/1:8,16:24:0.72:285,1,0	0/1:1,8:9:2.56:121,0,3
chr10	57108148	.	A	AATGT	9192.20	PASS	AB=1.000;AC=31;AF=0.574;AN=54;BaseQRankSum=-10.325;DP=704;FS=1.677;HRun=0;HaplotypeScore=126.7242;InbreedingCoeff=0.8295;MQ=67.39;MQ0=2;MQRankSum=7.886;QD=20.99;ReadPosRankSum=-3.381;VQSLOD=3.7696;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:20,10:31:24.08:533,24,0	1/1:12,0:12:26.83:278,27,0	./.	0/0:19,0:13:3:0,3,25	1/1:13,19:34:48.16:966,48,0	0/0:8,0:26:33.01:0,33,300	0/0:14,0:22:5.92:0,6,39	1/1:34,0:34:26.77:218,27,0	1/1:7,11:18:18.06:423,18,0	1/1:25,18:44:61.14:1106,61,0	1/1:4,5:10:15.05:286,15,0	0/0:7,0:21:29.97:0,30,270	0/0:27,0:27:48.15:0,48,716	0/0:23,0:23:33.09:0,33,483	1/1:12,13:26:21.07:494,21,0	0/0:7,0:23:29.95:0,30,263	0/0:15,0:16:2.98:0,3,21	0/0:12,0:24:15.02:0,15,140	1/1:15,6:20:21.07:388,21,0	1/1:12,20:33:59.99:1062,60,0	1/1:16,13:29:9.03:212,9,0	0/0:8,0:26:22.22:0,22,190	0/0:8,0:17:12.01:0,12,112	0/1:4,0:6:21.94:37,0,22	1/1:16,24:44:15.19:864,15,0	1/1:8,19:28:57.20:1251,57,0	1/1:24,29:53:36.12:847,36,0	1/1:10,1:15:12.04:227,12,0
chr10	57109114	.	GT	G	2906.33	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=6.124;DP=504;FS=31.237;HRun=9;HaplotypeScore=95.9588;InbreedingCoeff=0.9877;MQ=72.55;MQ0=0;MQRankSum=-0.267;QD=20.47;ReadPosRankSum=4.047;VQSLOD=2.2335;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:72.20:0,72,819	0/0:6,0:6:18.05:0,18,208	0/0:15,0:14:26.54:0,27,262	0/0:18,1:17:23.40:0,23,270	0/0:24,0:24:63.18:0,63,719	1/1:0,21:21:60.02:547,60,0	1/1:1,9:10:26.15:245,26,0	0/0:31,1:32:56.77:0,57,898	0/0:23,0:23:51.11:0,51,573	0/0:22,0:22:63.19:0,63,726	0/0:31,0:31:87.25:0,87,996	1/1:2,10:12:27.01:247,27,0	0/0:12,0:12:30.09:0,30,346	0/0:11,0:12:33.09:0,33,373	0/0:21,0:21:60.14:0,60,673	1/1:2,15:17:9.84:325,10,0	1/1:1,18:19:42:384,42,0	1/1:2,15:17:39.02:356,39,0	0/0:22,0:22:51.14:0,51,575	0/0:26,0:27:78.06:0,78,880	0/0:9,0:9:21.06:0,21,241	1/1:3,13:16:39.02:357,39,0	1/1:1,18:19:48.02:439,48,0	1/1:1,10:11:24.01:220,24,0	0/0:15,0:15:45.12:0,45,504	0/0:23,0:23:69.20:0,69,795	0/0:18,0:17:39.12:0,39,449	0/0:6,0:6:18.05:0,18,207
chr10	57109136	.	ATATCTATCTATC	A	9086.76	PASS	AB=0.789;AC=31;AF=0.574;AN=54;BaseQRankSum=9.961;DP=506;FS=9.399;HRun=0;HaplotypeScore=201.7911;InbreedingCoeff=0.4085;MQ=58.45;MQ0=5;MQRankSum=-7.404;QD=25.52;ReadPosRankSum=-2.095;VQSLOD=3.0380;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:48.14:0,48,2310	0/1:3,0:8:7.59:8,0,53	./.	0/1:15,0:11:0:0,0,0	0/0:31,0:30:72.23:0,72,3788	0/1:16,0:21:8.39:8,0,65	0/0:8,0:9:2.94:0,3,18	1/1:29,9:37:27.09:532,27,0	1/1:12,6:18:21.07:720,21,0	1/1:9,15:24:45.13:1266,45,0	1/1:18,14:32:30.06:755,30,0	0/1:5,0:13:12.60:13,0,76	0/0:17,0:17:33.10:0,33,1500	0/0:15,0:15:27.09:0,27,1357	1/1:6,14:20:36.12:1234,36,0	0/1:9,0:20:20.04:20,0,45	0/1:16,2:18:41.17:196,0,41	0/1:14,1:14:9.75:97,0,10	1/1:9,5:13:15.04:414,15,0	1/1:11,14:25:36.12:1178,36,0	1/1:7,3:10:3.01:103,3,0	0/0:9,0:10:4.89:0,5,140	0/0:12,0:15:1.39:0,1,52	0/0:10,0:13:3.77:0,4,49	1/1:5,11:16:21.07:720,21,0	1/1:15,15:30:39.13:1103,39,0	1/1:7,6:13:9.03:309,9,0	1/1:2,4:6:12.04:411,12,0
chr10	57109499	.	T	TTATTATTA	2455.62	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-1.284;DP=248;FS=1.690;HRun=0;HaplotypeScore=55.4167;InbreedingCoeff=0.7750;MQ=55.35;MQ0=0;MQRankSum=-5.763;QD=42.34;ReadPosRankSum=1.075;VQSLOD=3.1349;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:15:30.65:0,31,855	0/0:4,0:4:6.02:0,6,80	0/0:4,0:3:3.64:0,4,65	0/0:4,0:3:9.03:0,9,157	0/0:18,0:18:51.17:0,51,1201	1/1:0,0:3:6.02:231,6,0	1/1:2,0:5:6.49:109,6,0	0/0:22,0:22:66.22:0,66,1390	0/0:4,0:4:12.04:0,12,304	0/0:14,0:14:39.13:0,39,763	0/0:11,0:11:30.09:0,30,551	1/1:2,0:3:9.03:145,9,0	0/0:2,0:2:6.02:0,6,81	0/0:4,0:4:12.04:0,12,209	0/0:4,0:4:12.04:0,12,304	1/1:0,5:9:6.02:271,6,0	1/1:1,6:10:18.06:809,18,0	1/1:2,15:18:18.06:731,18,0	0/0:15,0:15:21.15:0,21,871	0/0:9,0:9:24.07:0,24,450	0/0:3,0:3:9.03:0,9,169	1/1:2,0:2:3.01:36,3,0	1/1:0,5:5:3.01:135,3,0	1/1:0,1:3:6.02:171,6,0	0/0:11,0:11:30.10:0,30,608	0/0:14,0:14:39.13:0,39,972	0/0:9,0:9:27.08:0,27,566	0/0:23,0:23:66.22:0,66,1731
chr10	57110117	.	CAT	C	7139.51	PASS	AB=0.663;AC=42;AF=0.750;AN=56;BaseQRankSum=7.964;DP=513;FS=16.092;HRun=0;HaplotypeScore=123.2499;InbreedingCoeff=0.7732;MQ=55.10;MQ0=25;MQRankSum=1.249;QD=19.04;ReadPosRankSum=0.366;VQSLOD=4.3519;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:63.11:0,63,1118	1/1:2,5:7:11.36:121,11,0	0/0:34,0:14:32.73:0,33,528	0/0:37,0:17:45.10:0,45,786	0/0:17,0:17:45.59:0,46,832	1/1:8,23:31:41.54:616,42,0	1/1:12,13:25:44.37:607,44,0	1/1:3,23:25:64.98:718,65,0	1/1:9,1:10:20.03:117,20,0	1/1:6,6:12:30.43:294,30,0	1/1:3,8:10:22.09:281,22,0	1/1:4,12:15:11.37:151,11,0	0/0:9,0:9:24.04:0,24,410	0/0:19,0:19:57.14:0,57,1041	1/1:7,8:15:28.81:324,29,0	1/1:4,4:8:11.16:150,11,0	1/1:17,14:32:41.96:582,42,0	1/1:12,11:22:42.66:585,43,0	1/1:1,20:21:58.40:663,58,0	1/1:4,8:12:15.45:167,15,0	1/1:24,6:28:37.93:321,38,0	1/1:3,6:9:9.01:121,9,0	0/1:3,4:7:2.08:87,0,2	0/1:17,14:31:9.08:356,0,9	1/1:6,6:12:21.66:228,22,0	1/1:8,12:20:44.39:422,44,0	1/1:10,4:13:2.79:130,3,0	1/1:1,2:2:6.02:97,6,0
chr10	57110119	.	T	TGC	8233.63	PASS	AB=0.971;AC=43;AF=0.768;AN=56;BaseQRankSum=8.655;DP=521;FS=14.658;HRun=0;HaplotypeScore=123.5342;InbreedingCoeff=0.8401;MQ=53.95;MQ0=24;MQRankSum=-1.397;QD=21.55;ReadPosRankSum=1.327;VQSLOD=4.6956;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:62.55:0,63,897	1/1:5,2:7:12.03:166,12,0	0/0:34,0:15:33.47:0,33,428	0/0:38,0:18:47.59:0,48,601	0/0:16,0:16:45.06:0,45,618	1/1:24,1:31:60.07:703,60,0	1/1:23,0:26:33.31:427,33,0	1/1:25,1:25:59.46:492,59,0	1/1:1,8:10:21.07:375,21,0	1/1:6,6:12:36:472,36,0	1/1:9,3:11:24.01:331,24,0	1/1:12,1:15:18.02:191,18,0	0/0:9,0:9:24.07:0,24,343	0/0:19,0:19:54.15:0,54,781	1/1:8,7:15:33.07:490,33,0	1/1:6,0:8:15.03:159,15,0	1/1:29,0:31:53.85:560,54,0	1/1:18,1:22:56.08:543,56,0	1/1:20,1:21:53.46:487,53,0	1/1:8,4:12:18.04:259,18,0	1/1:9,22:29:44.98:710,45,0	1/1:10,0:10:5.98:55,6,0	1/1:6,0:7:9.02:117,9,0	0/1:32,0:33:14.56:225,0,15	1/1:8,6:14:15.32:302,15,0	1/1:12,8:20:59.69:736,60,0	1/1:4,10:13:23.89:380,24,0	1/1:2,1:2:6:53,6,0
chr10	57110207	.	G	GC	3978.31	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=-0.144;DP=476;FS=13.143;HRun=8;HaplotypeScore=63.1136;InbreedingCoeff=0.9341;MQ=81.23;MQ0=2;MQRankSum=-1.452;QD=23.13;ReadPosRankSum=0.860;VQSLOD=3.2607;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:48.02:0,48,439	0/0:8,0:8:21.01:0,21,192	0/0:20,0:20:35.58:0,36,324	0/1:15,0:14:4.36:4,0,109	0/0:16,0:16:36.01:0,36,326	1/1:11,9:20:39.12:450,39,0	1/1:3,10:13:27.08:312,27,0	0/0:26,0:25:59.42:0,59,504	0/0:14,0:14:39.01:0,39,352	0/0:27,0:27:69.03:0,69,628	0/0:11,0:10:21.01:0,21,192	1/1:0,9:9:24.07:275,24,0	0/0:12,0:12:36.02:0,36,329	0/0:13,0:13:36.01:0,36,325	0/0:13,0:13:36.01:0,36,329	1/1:1,8:9:24.07:277,24,0	1/1:3,26:30:77.97:835,78,0	1/1:2,26:28:72.21:830,72,0	0/0:15,0:15:29.99:0,30,266	0/0:17,0:17:47.34:0,47,404	0/0:8,0:8:15.01:0,15,137	1/1:1,11:12:33.10:377,33,0	1/1:2,6:8:15.04:173,15,0	1/1:15,13:28:41.95:445,42,0	0/0:23,0:23:60.03:0,60,549	0/0:18,0:18:54.01:0,54,484	0/0:21,0:20:57.03:0,57,521	0/0:21,0:21:63.02:0,63,572
chr10	57110765	.	ATG	A	7087.08	PASS	AB=0.522;AC=17;AF=0.304;AN=56;BaseQRankSum=16.453;DP=630;FS=8.734;HRun=0;HaplotypeScore=99.3642;InbreedingCoeff=0.9137;MQ=81.25;MQ0=1;MQRankSum=-3.829;QD=35.08;ReadPosRankSum=3.339;VQSLOD=7.0636;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,132,2469	0/0:10,0:10:24.08:0,24,449	0/0:22,0:22:63.18:0,63,1112	0/0:28,0:28:76.78:0,77,1336	0/0:11,0:11:33.11:0,33,618	1/1:1,17:17:48.12:683,48,0	1/1:0,21:21:57.06:765,57,0	0/0:26,0:26:78.27:0,78,1442	0/0:25,0:25:75.26:0,75,1396	0/0:28,0:28:84.29:0,84,1574	0/0:23,0:23:69.24:0,69,1292	1/1:1,21:22:54.14:770,54,0	0/0:21,0:21:57.20:0,57,1059	0/0:8,0:8:24.08:0,24,443	0/0:21,0:21:63.22:0,63,1180	0/1:1,11:12:23.09:408,0,23	1/1:0,45:45:99:1590,108,0	1/1:0,23:23:66.22:971,66,0	0/0:20,0:20:60.21:0,60,1110	0/0:21,0:21:63.22:0,63,1180	0/0:40,0:40:99:0,114,2135	1/1:0,21:21:51.17:751,51,0	1/1:1,13:14:24.07:353,24,0	1/1:5,21:26:54.18:795,54,0	0/0:29,0:29:87.28:0,87,1595	0/0:26,0:26:78.27:0,78,1462	0/0:16,0:16:45.15:0,45,843	0/0:8,0:8:18.06:0,18,326
chr10	57110839	.	ATG	A	2028.15	PASS	AB=0.852;AC=27;AF=0.519;AN=52;BaseQRankSum=-0.236;DP=509;FS=37.218;HRun=0;HaplotypeScore=110.1721;InbreedingCoeff=0.4673;MQ=62.04;MQ0=5;MQRankSum=1.596;QD=6.92;ReadPosRankSum=-0.640;VQSLOD=1.4572;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:33,1:35:33.77:34,0,499	1/1:5,3:8:12.03:131,12,0	./.	./.	0/1:7,1:8:18.74:19,0,163	0/0:16,0:15:5.99:0,6,50	0/0:19,0:20:8.50:0,9,74	1/1:24,9:33:20.23:173,20,0	1/1:10,0:12:1.73:22,2,0	1/1:15,7:23:26.86:276,27,0	1/1:5,1:6:6:56,6,0	0/0:10,0:12:11.53:0,12,117	0/0:7,0:9:10.02:0,10,265	0/1:9,1:11:62.09:62,0,185	1/1:3,7:12:17.72:162,18,0	0/0:13,0:15:6.25:0,6,35	0/0:21,0:22:17.24:0,17,165	0/0:15,0:18:32.69:0,33,295	0/1:15,3:19:23.71:153,0,24	1/1:8,2:11:11.69:131,12,0	0/1:23,18:43:36.64:258,0,37	0/0:23,0:23:11.96:0,12,98	0/0:13,0:14:5.99:0,6,48	0/0:22,0:25:20.95:0,21,168	1/1:13,2:16:6.31:63,6,0	1/1:18,5:22:29.25:269,29,0	1/1:8,10:20:16.37:172,16,0	1/1:3,10:13:21.06:235,21,0
chr10	57111884	.	C	CTGGTATT	17654.23	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-7.877;DP=638;FS=3.985;HRun=0;HaplotypeScore=138.5838;InbreedingCoeff=0.9984;MQ=84.17;MQ0=0;MQRankSum=-18.377;QD=85.70;ReadPosRankSum=0.806;VQSLOD=5.5364;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,123,3162	0/0:10,0:10:27.09:0,27,712	0/0:17,0:17:48.13:0,48,994	0/0:29,0:29:80.48:0,80,1831	0/0:22,0:22:63.19:0,63,1514	1/1:5,14:23:57.11:1967,57,0	1/1:9,11:23:48.16:1844,48,0	0/0:32,0:32:87.26:0,87,2046	0/0:16,0:16:39.13:0,39,966	0/0:18,0:18:51.18:0,51,1319	0/0:8,0:8:18.06:0,18,475	1/1:6,22:32:72.25:2770,72,0	0/0:16,0:16:48.15:0,48,1183	0/0:18,0:18:51.18:0,51,1345	0/0:32,0:32:93.32:0,93,2437	1/1:5,26:32:84.29:3224,84,0	1/1:7,14:23:51.18:1967,51,0	1/1:3,14:16:48.16:1933,48,0	0/0:25,0:25:75.22:0,75,1867	0/0:22,0:22:63.20:0,63,1515	0/0:49,0:49:99:0,144,3728	1/1:10,13:24:63:1893,63,0	1/1:4,8:16:29.62:1006,30,0	1/1:6,9:16:30.10:1050,30,0	0/0:22,0:22:63.20:0,63,1587	0/0:17,0:17:42.14:0,42,1083	0/0:21,0:21:63.22:0,63,1599	0/0:16,0:16:48.16:0,48,1266
chr10	57112557	.	CT	C	3207.14	PASS	AB=0.681;AC=43;AF=0.768;AN=56;BaseQRankSum=4.836;DP=549;FS=10.914;HRun=15;HaplotypeScore=87.6728;InbreedingCoeff=0.7998;MQ=69.11;MQ0=5;MQRankSum=-1.008;QD=7.75;ReadPosRankSum=3.344;VQSLOD=1.9742;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,2:27:46.51:0,47,508	1/1:5,6:11:15.97:99,16,0	0/0:36,0:15:9.39:0,9,101	0/0:17,0:12:8.93:0,9,65	0/0:19,2:23:2.50:0,3,279	1/1:0,0:9:18.33:53,18,0	1/1:8,0:16:18.29:53,18,0	1/1:9,18:27:52.15:332,52,0	1/1:2,12:15:34.49:214,34,0	1/1:14,14:28:41.20:269,41,0	1/1:8,11:21:6.86:157,7,0	1/1:8,0:17:26.07:78,26,0	0/0:15,0:16:29.75:0,30,238	0/0:14,0:14:32.82:0,33,272	1/1:5,14:20:20.03:248,20,0	1/1:0,0:7:14.26:41,14,0	1/1:2,0:25:46.84:135,47,0	1/1:7,1:22:29.39:95,29,0	1/1:7,11:20:25.34:223,25,0	1/1:7,11:18:9.08:185,9,0	1/1:2,7:11:21.75:127,22,0	1/1:3,0:24:36.83:107,37,0	1/1:5,1:21:31.03:101,31,0	1/1:1,1:12:21.28:72,21,0	1/1:9,12:23:39.32:238,39,0	1/1:10,9:21:30.55:183,31,0	0/1:17,13:32:21.36:226,0,21	1/1:4,9:13:23.62:154,24,0
chr10	57113708	.	GTTTTTTTA	G	4502.03	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=1.625;DP=269;FS=32.991;HRun=0;HaplotypeScore=60.7447;InbreedingCoeff=0.7305;MQ=73.69;MQ0=2;MQRankSum=-1.385;QD=21.34;ReadPosRankSum=-0.626;VQSLOD=2.2430;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:60.10:0,60,1553	1/1:0,0:7:10.99:138,11,0	0/0:9,0:8:8.91:0,9,115	0/0:5,0:5:9.01:0,9,93	0/0:14,0:14:42.09:0,42,1138	1/1:0,7:7:8.55:237,9,0	1/1:10,0:10:29.83:232,30,0	1/1:25,0:24:66.39:568,66,0	1/1:3,0:3:6:70,6,0	1/1:5,0:5:15.02:187,15,0	1/1:2,0:8:17.65:166,18,0	1/1:1,0:4:3.01:48,3,0	0/0:1,0:1:3:0,3,28	0/0:9,0:9:12.02:0,12,147	1/1:3,0:5:15.01:236,15,0	1/1:4,0:4:11.99:101,12,0	1/1:1,25:27:12.04:326,12,0	1/1:1,21:22:3.01:82,3,0	1/1:15,0:17:16.59:337,17,0	1/1:11,0:11:23.97:199,24,0	1/1:5,0:5:8.97:70,9,0	1/1:2,0:2:5.96:43,6,0	1/1:3,0:3:5.99:50,6,0	1/1:1,5:6:3.01:77,3,0	1/1:9,0:11:26.97:363,27,0	1/1:0,0:10:29.77:290,30,0	1/1:5,0:7:20.99:281,21,0	1/1:11,0:11:32.96:402,33,0
chr10	57113756	.	ATTTT	A	995.39	PASS	AB=0.955;AC=22;AF=0.440;AN=50;BaseQRankSum=3.066;DP=179;FS=4.352;HRun=4;HaplotypeScore=40.1596;InbreedingCoeff=0.5921;MQ=55.29;MQ0=5;MQRankSum=-0.614;QD=17.46;ReadPosRankSum=0.730;VQSLOD=-0.2534;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:53.98:0,54,950	0/0:6,0:6:3.49:0,3,53	0/0:10,0:5:11.93:0,12,93	0/0:1,0:1:2.92:0,3,17	0/0:9,0:9:27.08:0,27,623	0/1:6,0:6:13.09:13,0,17	0/0:3,0:3:8.84:0,9,67	0/0:15,0:14:35.91:0,36,307	1/1:2,0:2:5.90:40,6,0	1/1:2,4:5:15:148,15,0	1/1:5,1:6:15:145,15,0	0/0:3,0:3:7.56:0,8,60	./.	0/0:1,0:1:3.01:0,3,50	1/1:3,2:5:11.56:141,12,0	0/0:1,0:1:3:0,3,28	0/0:31,0:31:17.70:0,18,317	0/0:22,0:21:27.51:0,28,237	1/1:5,0:4:11.85:90,12,0	1/1:2,0:2:5.99:50,6,0	./.	./.	0/0:2,0:2:6.01:0,6,55	1/1:4,0:4:1.26:5,1,0	1/1:3,2:5:14.92:160,15,0	1/1:1,1:2:6.01:74,6,0	1/1:2,2:4:12.01:141,12,0	0/1:9,1:10:29.77:165,0,30
chr10	57114820	.	GA	G	3089.01	PASS	AB=0.712;AC=18;AF=0.321;AN=56;BaseQRankSum=8.736;DP=576;FS=4.224;HRun=11;HaplotypeScore=63.7308;InbreedingCoeff=0.7995;MQ=80.23;MQ0=1;MQRankSum=-0.522;QD=15.60;ReadPosRankSum=2.892;VQSLOD=4.6283;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:69.13:0,69,711	0/0:6,0:6:18.05:0,18,192	0/0:25,2:25:2.25:0,2,274	0/0:15,0:14:13.22:0,13,110	0/0:29,0:29:50.70:0,51,742	1/1:5,12:18:9.29:270,9,0	0/1:2,13:15:0.64:212,0,1	0/0:22,1:23:29.48:0,29,513	0/0:14,0:14:39.09:0,39,409	0/0:22,2:25:7.70:0,8,461	0/0:19,2:21:4.96:0,5,463	1/1:0,9:9:23.97:197,24,0	0/0:11,1:12:11.44:0,11,325	0/1:14,2:16:13.20:13,0,284	0/0:22,0:23:59.98:0,60,622	1/1:3,18:21:21.95:387,22,0	1/1:4,16:20:16.29:338,16,0	1/1:3,20:23:24.96:411,25,0	0/0:6,0:23:51.14:0,51,279	0/0:30,1:31:59.57:0,60,839	0/0:11,0:11:33.08:0,33,352	1/1:3,19:22:56.93:468,57,0	1/1:5,31:36:25.90:626,26,0	1/1:0,18:18:44.81:369,45,0	0/0:16,0:16:39.09:0,39,410	0/0:23,1:24:29.46:0,29,505	0/0:34,1:37:71.44:0,71,949	0/0:15,0:15:45.11:0,45,478
chr10	57116304	.	A	AAC	5322.01	PASS	AB=0.706;AC=32;AF=0.571;AN=56;BaseQRankSum=-4.787;DP=757;FS=6.299;HRun=0;HaplotypeScore=141.5203;InbreedingCoeff=0.3712;MQ=66.51;MQ0=4;MQRankSum=0.102;QD=9.71;ReadPosRankSum=0.687;VQSLOD=4.3857;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:34:55.60:0,56,621	0/0:13,0:13:18.05:0,18,203	0/0:28,0:20:6.01:0,6,66	0/0:37,0:26:5.84:0,6,67	0/0:23,0:23:29.26:0,29,278	1/1:22,1:25:4.09:30,4,0	1/1:33,0:30:23.15:199,23,0	0/0:13,0:24:27.43:0,27,127	0/1:15,12:27:31.71:423,0,32	1/1:15,15:31:39.07:545,39,0	0/1:10,15:25:3.82:373,0,4	1/1:33,0:32:8.77:62,9,0	0/0:24,0:25:42.10:0,42,465	0/0:23,0:23:42.03:0,42,457	1/1:12,18:30:35.95:519,36,0	1/1:21,0:23:14.90:130,15,0	1/1:14,0:26:23.48:199,23,0	1/1:12,0:19:12:105,12,0	0/1:15,5:20:67.77:150,0,68	0/1:13,5:19:22.95:147,0,23	0/1:32,56:90:54.60:1258,0,55	1/1:16,0:16:1.95:22,2,0	1/1:19,0:16:4.97:47,5,0	0/1:21,0:27:0.15:0,0,1	1/1:11,12:23:26.19:411,26,0	0/1:10,9:19:31.77:356,0,32	1/1:13,4:16:12.04:184,12,0	0/1:12,11:23:80.14:162,0,80
chr10	57117530	.	C	CA	23858.88	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-8.518;DP=740;FS=5.261;HRun=0;HaplotypeScore=81.8743;InbreedingCoeff=0.9995;MQ=93.11;MQ0=0;MQRankSum=-9.230;QD=43.14;ReadPosRankSum=1.994;VQSLOD=5.4857;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,114,1575	1/1:0,11:11:30.10:479,30,0	0/0:34,0:34:93.30:0,93,1281	0/0:33,0:33:90.73:0,91,1168	0/0:30,0:30:90.30:0,90,1256	1/1:0,26:26:63.18:980,63,0	1/1:1,25:27:52.74:1073,53,0	1/1:0,33:33:96.25:1398,96,0	1/1:1,24:25:72.25:1151,72,0	1/1:1,26:27:75.23:1173,75,0	1/1:1,28:29:78.27:1242,78,0	1/1:0,18:18:51.17:815,51,0	0/0:22,0:22:66.22:0,66,921	0/0:28,0:28:84.28:0,84,1171	1/1:0,21:22:60.14:929,60,0	1/1:1,25:26:72.25:1151,72,0	1/1:0,23:23:69.24:1102,69,0	1/1:1,18:19:54.18:863,54,0	1/1:1,29:30:87.24:1319,87,0	1/1:0,30:30:75.26:1198,75,0	1/1:2,31:33:93.32:1487,93,0	1/1:1,29:30:78.27:1245,78,0	1/1:0,21:21:60.20:954,60,0	1/1:1,23:24:60.20:959,60,0	1/1:0,25:25:57.19:910,57,0	1/1:0,39:39:99:1753,114,0	1/1:0,27:27:81.28:1294,81,0	1/1:0,8:8:24.08:383,24,0
chr10	57117805	.	A	AAAAACAAAACAAAAC	11079.27	PASS	AB=0.634;AC=33;AF=0.589;AN=56;BaseQRankSum=-3.221;DP=575;FS=9.790;HRun=0;HaplotypeScore=188.7498;InbreedingCoeff=0.6602;MQ=58.60;MQ0=2;MQRankSum=-5.218;QD=29.39;ReadPosRankSum=-1.689;VQSLOD=2.9638;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:51.12:0,51,1766	1/1:6,0:20:21.07:665,21,0	0/0:21,0:13:3.01:0,3,38	0/0:27,0:14:2.12:0,2,24	0/0:28,0:28:57.17:0,57,1672	0/0:7,0:22:13.46:0,13,38	1/1:5,0:12:2.51:8,3,0	1/1:21,0:26:24.08:733,24,0	1/1:26,0:26:51.02:1680,51,0	1/1:8,5:23:29.70:1480,30,0	1/1:10,9:27:18.06:1078,18,0	0/0:6,0:12:2.89:0,3,9	0/0:12,0:12:27.08:0,27,1015	0/0:24,0:24:45.15:0,45,1590	1/1:10,7:22:6.02:426,6,0	0/1:6,0:16:1.90:4,0,2	0/0:10,0:16:8.46:0,8,139	0/0:1,0:5:3.27:0,3,10	1/1:15,0:14:25.25:493,25,0	1/1:12,12:32:21.01:982,21,0	1/1:11,0:11:12:376,12,0	0/1:4,0:18:5.28:106,0,5	0/1:13,0:20:1.53:2,0,2	1/1:11,0:16:1.45:56,1,0	1/1:7,10:22:6.02:426,6,0	1/1:12,11:28:37.41:1109,37,0	1/1:0,0:36:15.26:977,15,0	1/1:5,0:5:9.03:479,9,0
chr10	57117922	.	CTGTGTGTGTGTGTGTGTG	C	839.97	PASS	AB=0.913;AC=14;AF=0.318;AN=44;BaseQRankSum=5.025;DP=431;FS=25.544;HRun=0;HaplotypeScore=168.3777;InbreedingCoeff=0.2649;MQ=36.86;MQ0=30;MQRankSum=-4.825;QD=5.96;ReadPosRankSum=-0.589;VQSLOD=1.1335;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:26:15.05:0,15,588	0/0:2,0:2:0:0,0,0	./.	./.	0/0:20,0:20:18.06:0,18,585	1/1:13,0:14:3.01:128,3,0	./.	0/0:18,0:16:0:0,0,0	0/0:14,0:13:3.01:0,3,53	0/1:21,0:23:91:357,0,91	./.	1/1:12,0:12:3.01:56,3,0	0/0:16,0:14:24.08:0,24,1523	0/0:16,0:15:18.06:0,18,1222	./.	1/1:12,0:13:3.01:86,3,0	0/0:16,0:12:1.25:0,1,4	1/1:10,0:8:3.01:134,3,0	0/0:14,0:11:0.47:0,0,1	0/0:5,2:8:0.47:0,0,1	0/0:15,0:13:3.01:0,3,180	0/0:20,0:19:0:0,0,0	0/1:11,0:10:0:0,0,0	0/0:11,0:9:0:0,0,0	./.	1/1:21,0:21:5.38:44,5,0	0/1:15,0:15:51.82:67,0,52	0/1:11,0:12:83.12:83,0,195
chr10	57120044	.	C	CA	4150.99	PASS	AB=0.792;AC=18;AF=0.321;AN=56;BaseQRankSum=-9.880;DP=443;FS=0.000;HRun=8;HaplotypeScore=43.0941;InbreedingCoeff=0.8373;MQ=76.55;MQ0=0;MQRankSum=0.061;QD=24.56;ReadPosRankSum=2.450;VQSLOD=4.0295;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:84.02:0,84,763	0/0:8,0:8:18.01:0,18,165	0/0:16,0:15:14.93:0,15,193	0/1:20,0:16:15.03:15,0,92	0/0:24,0:24:54.01:0,54,489	1/1:1,17:18:48.14:554,48,0	1/1:6,7:12:18.05:208,18,0	0/0:24,0:24:63.03:0,63,577	0/0:7,0:7:18.01:0,18,165	0/0:20,0:20:51.01:0,51,467	0/0:19,0:20:53.06:0,53,473	1/1:1,16:17:42.12:485,42,0	0/0:6,0:6:14.99:0,15,133	0/0:9,0:9:27.01:0,27,247	0/0:12,0:12:26.99:0,27,241	0/1:2,5:7:9.41:155,0,9	1/1:4,23:27:63.19:727,63,0	1/1:1,23:24:63.19:727,63,0	0/0:9,0:9:21:0,21,192	0/0:24,0:24:66.03:0,66,604	0/0:11,0:11:27.01:0,27,247	1/1:2,13:15:36.11:415,36,0	1/1:1,9:10:24.07:277,24,0	1/1:0,18:18:51.15:588,51,0	0/0:12,0:12:32.99:0,33,297	0/0:17,0:16:39:0,39,351	0/0:17,0:17:44.99:0,45,403	0/0:9,0:9:27.01:0,27,247
chr10	57120159	.	GA	G	2439.80	PASS	AB=0.825;AC=29;AF=0.518;AN=56;BaseQRankSum=3.485;DP=520;FS=4.186;HRun=10;HaplotypeScore=76.3849;InbreedingCoeff=0.0305;MQ=38.09;MQ0=39;MQRankSum=-4.960;QD=6.83;ReadPosRankSum=-0.758;VQSLOD=1.8632;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:20.68:0,21,432	0/1:2,1:2:18.84:19,0,26	0/0:42,0:5:4.52:0,5,17	0/0:48,1:3:2.60:0,3,10	0/0:25,0:24:54.11:0,54,572	1/1:6,8:13:26.35:214,26,0	1/1:4,10:12:26.79:220,27,0	0/1:22,7:27:99:128,0,195	0/1:8,3:10:60.24:60,0,109	0/1:16,8:19:99:118,0,150	0/1:22,2:23:20.25:20,0,53	1/1:1,8:9:17.93:150,18,0	0/0:7,0:7:18:0,18,179	0/0:7,0:7:17.94:0,18,180	0/0:13,1:13:0.47:0,0,197	1/1:6,7:13:26.96:227,27,0	1/1:15,11:23:32.96:282,33,0	0/1:13,12:20:0.08:226,0,0	0/1:15,3:16:54.68:55,0,185	0/1:17,5:21:70.19:70,0,106	0/1:7,0:5:7.22:7,0,115	1/1:2,7:8:20.49:164,20,0	1/1:3,10:13:25.22:206,25,0	1/1:4,10:12:23.81:208,24,0	0/1:18,4:21:79.85:80,0,138	0/1:15,5:18:55.80:56,0,232	0/1:22,5:26:81.42:81,0,209	0/1:11,2:10:28.07:28,0,145
chr10	57120170	.	GA	G	1243.98	PASS	AB=0.816;AC=15;AF=0.268;AN=56;BaseQRankSum=-2.720;DP=531;FS=7.247;HRun=10;HaplotypeScore=86.5435;InbreedingCoeff=-0.2883;MQ=40.36;MQ0=37;MQRankSum=-1.610;QD=4.35;ReadPosRankSum=-1.486;VQSLOD=0.6850;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:45.56:0,46,502	0/1:2,2:3:20.77:45,0,21	0/1:62,0:11:6.09:6,0,71	0/0:66,0:8:9.62:0,10,99	0/0:20,1:21:56.95:0,57,594	0/0:13,0:13:28.07:0,28,155	0/0:18,0:17:25.19:0,25,133	0/1:17,9:25:99:272,0,103	0/1:5,6:10:62.50:83,0,62	0/1:12,9:16:99:170,0,111	0/1:20,1:20:0.63:39,0,1	0/1:11,0:11:3.68:4,0,93	0/0:8,0:8:21.01:0,21,214	0/0:8,0:8:10.12:0,10,166	0/1:12,1:12:78.41:78,0,117	0/0:10,0:10:24.58:0,25,122	0/0:22,0:21:42.99:0,43,294	0/0:25,0:20:37.31:0,37,226	0/1:17,7:22:99:203,0,103	0/1:11,5:15:41.64:108,0,42	0/1:5,1:5:18.31:18,0,43	0/0:9,0:8:18.26:0,18,86	0/0:11,0:11:15.12:0,15,80	0/0:16,0:15:16.94:0,17,101	0/1:13,5:17:38.85:128,0,39	0/1:11,5:14:63.39:63,0,178	0/1:18,6:23:99:142,0,138	0/1:11,2:9:38.77:39,0,85
chr10	57120171	.	A	AAAAAAAAAG	5880.64	PASS	AB=1.000;AC=26;AF=0.464;AN=56;BaseQRankSum=-6.512;DP=536;FS=9.834;HRun=0;HaplotypeScore=131.8616;InbreedingCoeff=0.8380;MQ=40.51;MQ0=37;MQRankSum=-2.975;QD=25.79;ReadPosRankSum=-2.023;VQSLOD=3.6525;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:42.14:0,42,922	1/1:4,0:3:9.02:177,9,0	0/0:61,0:11:12.05:0,12,94	0/0:65,0:8:11.65:0,12,87	0/0:21,0:21:50.90:0,51,896	0/0:13,0:13:19.48:0,19,478	0/0:19,0:18:18.94:0,19,389	1/1:26,0:25:67.91:1070,68,0	1/1:11,0:10:21.07:430,21,0	1/1:21,0:16:44.97:730,45,0	1/1:8,12:22:17.64:385,18,0	0/1:11,0:11:3.26:3,0,208	0/0:8,0:8:15.04:0,15,210	0/0:8,0:8:18:0,18,241	1/1:13,0:12:19.51:431,20,0	0/0:10,0:10:9.60:0,10,309	0/0:22,0:21:41.32:0,41,599	0/0:25,0:21:29.86:0,30,445	1/1:26,0:24:49.85:569,50,0	1/1:16,0:15:8.21:260,8,0	1/1:6,0:5:6.02:156,6,0	0/0:9,0:8:10.21:0,10,269	0/0:11,0:11:12.01:0,12,353	0/0:15,0:14:18.69:0,19,315	1/1:18,0:17:10.01:297,10,0	1/1:17,0:15:18.91:518,19,0	1/1:23,0:22:15.83:574,16,0	0/1:13,0:9:0.30:281,0,0
chr10	57120180	.	GAAAGAAAAAA	G	580	PASS	AB=0.970;AC=9;AF=0.161;AN=56;BaseQRankSum=-4.632;DP=545;FS=0.641;HRun=0;HaplotypeScore=153.4849;InbreedingCoeff=-0.2009;MQ=44.31;MQ0=31;MQRankSum=-1.928;QD=3.39;ReadPosRankSum=-3.707;VQSLOD=1.0414;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:48.11:0,48,1983	0/0:4,0:3:9.03:0,9,173	0/0:69,0:12:23.90:0,24,238	0/0:69,0:9:15.87:0,16,171	0/0:22,0:22:58.75:0,59,1869	0/0:14,0:14:26.92:0,27,503	0/0:21,0:20:27.09:0,27,515	0/1:30,0:30:99:265,0,712	0/0:11,0:10:7.94:0,8,521	0/1:19,0:15:44.44:44,0,927	0/0:23,0:23:31.19:0,31,654	0/0:12,0:12:29.68:0,30,422	0/0:7,0:7:18.06:0,18,437	0/0:7,0:7:18.03:0,18,491	0/1:12,0:12:61.62:62,0,475	0/0:10,0:10:27.09:0,27,520	0/0:22,0:22:47.14:0,47,797	0/0:24,0:22:36.08:0,36,605	0/1:26,0:25:99:100,0,888	0/1:11,5:15:14.74:15,0,615	0/0:6,0:5:8.99:0,9,131	0/0:10,0:9:27.09:0,27,505	0/0:9,0:9:24.08:0,24,445	0/0:14,0:14:39.06:0,39,615	0/1:17,0:17:14.33:14,0,899	0/1:18,0:16:75.37:75,0,675	0/1:20,0:19:76.66:77,0,915	0/1:12,0:8:67.25:67,0,317
chr10	57120184	.	GAAAA	G	2824.15	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-2.515;DP=539;FS=5.259;HRun=14;HaplotypeScore=104.9823;InbreedingCoeff=0.9614;MQ=46.53;MQ0=28;MQRankSum=-1.429;QD=20.32;ReadPosRankSum=2.111;VQSLOD=2.7228;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:54.07:0,54,883	0/0:3,0:3:9.03:0,9,106	0/0:69,0:12:16.23:0,16,163	0/0:66,0:10:10.17:0,10,124	0/0:21,0:22:57.07:0,57,907	1/1:3,11:14:20.96:295,21,0	1/1:4,14:17:26.95:345,27,0	0/0:24,0:33:73.32:0,73,673	0/0:11,0:10:24.06:0,24,335	0/0:18,0:16:41.95:0,42,531	0/0:18,0:20:31.42:0,31,447	1/1:13,2:15:23.91:278,24,0	0/0:7,0:7:20.93:0,21,234	0/0:7,0:7:12.03:0,12,206	0/0:10,0:10:21.95:0,22,334	1/1:2,9:11:21.02:289,21,0	1/1:6,17:23:15.69:438,16,0	1/1:9,14:21:26.80:330,27,0	0/0:22,0:24:53.32:0,53,801	0/0:15,0:14:24.03:0,24,384	0/0:5,0:5:8.98:0,9,110	1/1:6,6:11:33.04:377,33,0	1/1:3,6:9:23.98:295,24,0	1/1:9,5:14:29.90:388,30,0	0/0:14,0:15:33.02:0,33,529	0/0:19,0:18:38.98:0,39,495	0/0:15,0:16:41.91:0,42,538	0/0:12,0:8:23.94:0,24,305
chr10	57121575	.	TC	T	337.31	PASS	AB=1.000;AC=21;AF=0.389;AN=54;BaseQRankSum=6.047;DP=616;FS=5.761;HRun=5;HaplotypeScore=127.0643;InbreedingCoeff=0.3778;MQ=55.72;MQ0=25;MQRankSum=-5.981;QD=1.15;ReadPosRankSum=2.364;VQSLOD=-0.5257;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:47:99:0,129,1584	0/1:9,0:9:11.16:33,0,11	0/0:27,0:12:23.50:0,24,232	0/1:34,0:15:18.60:19,0,196	0/0:31,0:31:72.07:0,72,890	1/1:31,1:26:9.41:38,9,0	1/1:21,1:19:6.90:66,7,0	0/0:41,0:37:21.92:0,22,109	0/1:21,0:21:3.54:4,0,31	0/0:32,0:27:11.70:0,12,130	0/0:11,0:9:4.77:0,5,24	1/1:16,1:14:10.02:57,10,0	0/0:25,0:25:61.87:0,62,728	0/0:12,0:12:32.89:0,33,390	0/0:12,0:12:3.43:0,3,20	1/1:25,1:21:5.42:35,5,0	1/1:10,0:9:11.94:60,12,0	1/1:4,0:3:5.05:39,5,0	0/1:17,0:17:21.54:22,0,22	0/0:20,0:20:15.36:0,15,68	0/0:25,0:24:6.34:0,6,22	1/1:25,6:24:4.76:95,5,0	0/1:21,0:17:0:0,0,0	./.	0/0:16,0:16:17.35:0,17,63	0/1:23,0:23:23.39:23,0,71	0/1:23,0:22:12.94:20,0,13	0/0:10,0:10:12.37:0,12,50
chr10	57121576	.	C	CT	1105.62	PASS	AB=0.994;AC=29;AF=0.518;AN=56;BaseQRankSum=4.862;DP=555;FS=5.381;HRun=1;HaplotypeScore=119.4133;InbreedingCoeff=0.2522;MQ=58.21;MQ0=25;MQRankSum=-8.218;QD=3.19;ReadPosRankSum=4.284;VQSLOD=0.3617;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:47:99:0,132,1651	0/1:9,0:9:11.07:37,0,11	0/0:27,0:12:23.50:0,24,234	0/0:34,0:15:0.31:0,0,216	0/0:31,0:31:78.06:0,78,950	1/1:2,22:19:15.03:205,15,0	1/1:5,13:15:9:88,9,0	0/1:33,0:31:32.46:32,0,33	0/1:16,0:18:15.65:51,0,16	0/1:24,0:23:15.38:66,0,15	0/0:9,0:7:4.77:0,5,24	1/1:9,6:13:12.01:119,12,0	0/0:25,0:25:69.10:0,69,832	0/0:12,0:12:35.88:0,36,430	0/0:10,0:11:3.43:0,3,20	1/1:8,13:16:5.32:37,5,0	1/1:6,6:11:14.94:169,15,0	1/1:3,3:3:5.05:39,5,0	0/1:14,0:15:9.15:9,0,42	0/1:15,0:15:10.04:10,0,40	0/1:18,0:18:2.53:4,0,3	1/1:12,12:20:14.34:169,14,0	1/1:3,15:16:0.47:1,0,0	0/0:4,7:9:0:0,0,0	0/1:15,0:15:5.09:17,0,5	0/1:18,1:19:2.70:159,0,3	1/1:20,0:19:13.34:51,13,0	1/1:8,0:8:2.25:13,2,0
chr10	57121578	.	CCCA	C	366.38	PASS	AB=0.979;AC=11;AF=0.196;AN=56;BaseQRankSum=6.297;DP=550;FS=46.883;HRun=0;HaplotypeScore=130.3411;InbreedingCoeff=0.0220;MQ=59.90;MQ0=24;MQRankSum=-3.024;QD=2.58;ReadPosRankSum=0.747;VQSLOD=0.8974;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:46:99:0,131,2848	0/1:10,0:10:80.95:81,0,131	0/0:30,0:15:41.38:0,41,625	0/0:34,0:15:9.74:0,10,443	0/0:29,0:29:74.97:0,75,1653	0/0:25,0:19:32.85:0,33,333	1/1:19,0:15:4.12:53,4,0	0/0:32,0:29:76.63:0,77,695	0/1:15,0:16:34.47:34,0,240	0/0:28,0:23:23.59:0,24,653	0/0:9,0:7:12.04:0,12,156	0/1:15,1:13:45.04:95,0,45	0/0:24,0:24:63.22:0,63,1385	0/0:12,0:12:35.90:0,36,733	0/0:10,1:11:6.49:0,6,86	0/1:18,1:14:22.10:22,0,176	0/1:12,0:11:45.47:45,0,140	1/1:5,0:3:1.96:38,2,0	0/0:16,0:16:1.15:0,1,371	0/0:17,1:18:10.17:0,10,373	0/0:17,0:16:14.56:0,15,181	0/1:25,1:19:14.48:14,0,87	0/0:17,1:14:2.64:0,3,34	0/0:12,0:10:6.40:0,6,60	0/0:16,0:16:30.55:0,31,357	0/1:19,0:19:99:125,0,493	0/0:22,0:21:35.82:0,36,380	0/0:8,0:8:21.07:0,21,259
chr10	57121580	.	C	CT	7241.18	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-2.672;DP=555;FS=13.174;HRun=0;HaplotypeScore=99.5186;InbreedingCoeff=0.8457;MQ=62.08;MQ0=24;MQRankSum=-4.821;QD=19.06;ReadPosRankSum=-1.775;VQSLOD=5.3862;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,129,1675	1/1:0,8:11:17.88:198,18,0	0/0:33,0:18:44.34:0,44,430	0/0:33,0:15:4.87:0,5,223	0/0:29,0:29:72.06:0,72,943	1/1:26,0:21:32.73:313,33,0	1/1:20,0:18:17.95:165,18,0	1/1:7,24:28:69.17:1004,69,0	1/1:3,12:16:26.81:296,27,0	1/1:4,23:22:63.21:976,63,0	1/1:0,8:7:11.96:157,12,0	1/1:11,0:14:14.98:139,15,0	0/0:23,0:23:63.12:0,63,811	0/0:11,0:11:32.90:0,33,429	1/1:2,7:11:5.97:56,6,0	1/1:15,1:15:23.71:184,24,0	1/1:9,0:11:23.99:228,24,0	1/1:6,0:4:2.33:29,2,0	1/1:1,15:16:41.91:571,42,0	1/1:1,16:17:32.81:365,33,0	1/1:2,16:17:15.05:224,15,0	1/1:24,0:19:17.22:179,17,0	1/1:15,0:13:2.92:17,3,0	1/1:8,0:9:5.91:42,6,0	1/1:0,15:15:30.10:459,30,0	1/1:1,16:19:57.08:780,57,0	1/1:1,23:23:36.05:530,36,0	1/1:0,8:8:21.07:327,21,0
chr10	57123945	.	CTCCT	C	4458.46	PASS	AB=0.661;AC=14;AF=0.259;AN=54;BaseQRankSum=5.725;DP=767;FS=5.714;HRun=0;HaplotypeScore=151.1886;InbreedingCoeff=0.5279;MQ=51.75;MQ0=21;MQRankSum=0.450;QD=18.27;ReadPosRankSum=3.259;VQSLOD=4.2985;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,108,2320	0/0:18,0:18:40.26:0,40,592	./.	0/0:14,0:4:11.78:0,12,184	0/0:20,0:20:57.11:0,57,1122	1/1:17,8:25:25.10:689,25,0	1/1:28,6:32:1.65:591,2,0	0/0:46,0:41:66.26:0,66,1023	0/0:27,0:27:57.18:0,57,1302	0/0:36,0:34:92.67:0,93,2022	0/0:20,0:20:36.12:0,36,839	0/1:7,24:31:5.50:558,0,5	0/0:30,0:29:60.18:0,60,1275	0/0:30,0:30:75.26:0,75,1727	0/0:40,0:39:98.53:0,99,2178	0/1:6,22:28:54.22:486,0,54	0/1:16,6:20:19.22:269,0,19	1/1:5,16:21:2.65:254,3,0	0/0:25,0:14:27.07:0,27,540	0/0:28,0:26:72.21:0,72,1603	0/0:47,0:44:99:0,99,2059	1/1:17,11:26:11.37:745,11,0	1/1:12,7:18:10.11:425,10,0	0/1:23,13:36:67.98:441,0,68	0/0:24,0:24:54.17:0,54,1278	0/0:29,0:28:72.23:0,72,1601	0/0:23,0:22:48.10:0,48,947	0/0:19,0:19:51.16:0,51,1132
chr10	57125147	.	A	AT	4575.13	PASS	AB=1.000;AC=30;AF=0.536;AN=56;BaseQRankSum=-1.261;DP=457;FS=28.477;HRun=3;HaplotypeScore=69.5418;InbreedingCoeff=0.4410;MQ=75.67;MQ0=1;MQRankSum=0.990;QD=14.62;ReadPosRankSum=-1.521;VQSLOD=2.6076;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:66.16:0,66,762	0/1:14,0:14:7.79:38,0,8	0/0:10,0:10:13.13:0,13,157	0/0:11,0:10:11.28:0,11,135	0/0:26,0:26:75.23:0,75,896	1/1:0,27:27:63.21:880,63,0	1/1:0,10:10:27.09:377,27,0	1/1:25,0:25:12.63:95,13,0	0/1:11,0:11:10.26:17,0,10	0/1:25,0:25:20.28:20,0,25	0/1:14,0:14:5.19:39,0,5	1/1:1,9:10:24.08:335,24,0	0/0:12,0:12:36.08:0,36,409	0/0:6,0:6:18.05:0,18,206	0/0:16,0:16:9.25:0,9,24	1/1:0,14:14:33.11:461,33,0	1/1:0,14:14:33.11:461,33,0	1/1:2,14:16:36.12:502,36,0	1/1:20,0:20:8.38:64,8,0	0/1:19,0:19:14.27:14,0,17	0/1:14,0:14:7.88:58,0,8	1/1:0,8:9:24.06:307,24,0	1/1:0,11:11:30.01:394,30,0	1/1:2,13:15:33.04:437,33,0	0/1:22,0:22:26.98:37,0,27	0/1:23,0:23:12.74:39,0,13	0/0:20,0:20:13.32:0,13,50	0/0:19,0:19:18.47:0,18,64
chr10	57127792	.	CT	C	5550.35	PASS	AB=0.875;AC=27;AF=0.482;AN=56;BaseQRankSum=-0.417;DP=520;FS=3.692;HRun=11;HaplotypeScore=78.1435;InbreedingCoeff=0.9262;MQ=71.19;MQ0=0;MQRankSum=0.654;QD=19.68;ReadPosRankSum=-0.769;VQSLOD=5.5665;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,1:23:29.57:0,30,519	1/1:2,5:7:14.98:123,15,0	0/0:12,0:12:18.04:0,18,186	0/1:6,1:7:12.63:13,0,68	0/0:25,0:25:69.16:0,69,723	0/0:3,0:16:28.57:0,29,160	0/0:6,0:14:37.92:0,38,285	1/1:9,19:28:53.85:433,54,0	1/1:2,19:21:56.91:468,57,0	1/1:1,33:34:98.87:810,99,0	1/1:2,21:23:56.89:468,57,0	0/0:1,0:17:37.10:0,37,187	0/0:16,0:16:36.09:0,36,384	0/0:18,0:18:45.11:0,45,479	1/1:3,19:22:56.93:468,57,0	0/0:2,0:15:37.17:0,37,203	0/0:8,0:25:51.77:0,52,311	0/0:1,0:17:40.02:0,40,208	1/1:2,12:14:35.94:293,36,0	1/1:3,19:22:53.89:443,54,0	1/1:2,12:15:34.98:277,35,0	0/0:1,0:12:31.50:0,32,167	0/0:2,1:16:18.37:0,18,193	0/0:1,0:12:25.57:0,26,128	1/1:6,25:33:75.95:603,76,0	1/1:4,20:24:59.88:487,60,0	1/1:3,22:25:62.82:517,63,0	1/1:0,7:7:17.98:148,18,0
chr10	57128403	.	TTGTAC	T	10039	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=15.087;DP=631;FS=5.888;HRun=0;HaplotypeScore=123.2374;InbreedingCoeff=0.9836;MQ=87.06;MQ0=0;MQRankSum=-8.015;QD=53.97;ReadPosRankSum=4.986;VQSLOD=5.3120;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,123,3694	0/0:13,0:13:39.13:0,39,1233	0/0:21,0:21:60.20:0,60,1656	0/0:28,0:28:80.92:0,81,2182	0/0:29,0:29:84.29:0,84,2642	1/1:0,27:27:78.27:1716,78,0	1/1:1,16:17:39.13:862,39,0	0/0:36,0:36:99:0,105,3126	0/0:12,0:12:36.12:0,36,1124	0/0:24,0:24:72.25:0,72,2253	0/0:20,0:20:60.21:0,60,1898	1/1:0,18:18:39.13:862,39,0	0/0:22,0:22:66.17:0,66,1905	0/0:24,0:24:72.25:0,72,2262	0/0:26,0:26:78.27:0,78,2417	1/1:0,13:13:39.13:862,39,0	1/1:0,27:27:72.25:1593,72,0	1/1:2,18:20:39.13:863,39,0	0/0:27,0:27:78.27:0,78,2414	0/0:17,0:17:51.18:0,51,1599	0/0:25,0:25:75.24:0,75,2188	1/1:0,20:20:48.16:1062,48,0	1/1:0,25:25:63.06:1357,63,0	1/1:0,19:19:39.61:863,40,0	0/0:28,0:28:84.29:0,84,2603	0/0:18,0:18:54.19:0,54,1646	0/0:32,0:32:96.31:0,96,2880	0/0:2,0:2:6:0,6,116
chr10	57129756	.	C	CATAT	3116.45	PASS	AB=0.624;AC=24;AF=0.444;AN=54;BaseQRankSum=-1.079;DP=306;FS=0.553;HRun=0;HaplotypeScore=53.5661;InbreedingCoeff=0.6040;MQ=70.10;MQ0=3;MQRankSum=1.338;QD=20.92;ReadPosRankSum=-2.415;VQSLOD=2.6698;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:2.43:0,2,368	1/1:0,0:2:2.80:13,3,0	./.	0/0:15,0:9:3.36:0,3,15	0/0:25,0:25:58.60:0,59,970	0/0:15,0:16:42.11:0,42,628	0/0:6,0:6:15.03:0,15,204	0/1:23,0:43:75.07:242,0,75	1/1:1,8:10:15.05:374,15,0	1/1:2,4:8:18.05:347,18,0	1/1:1,2:4:3.01:75,3,0	0/0:8,0:8:18.06:0,18,293	0/0:8,0:8:15.03:0,15,204	0/0:4,0:4:9.03:0,9,149	1/1:1,2:5:5.81:87,6,0	0/0:7,0:7:15.05:0,15,251	0/0:20,0:20:44.34:0,44,686	0/0:18,0:18:42.09:0,42,630	1/1:5,8:13:29.86:542,30,0	1/1:2,4:6:6.02:150,6,0	1/1:3,4:7:6.02:150,6,0	0/0:4,0:4:3.01:0,3,51	0/0:4,0:4:6.01:0,6,76	0/0:3,0:3:3.01:0,3,51	1/1:7,0:7:6:51,6,0	1/1:2,8:12:20.65:377,21,0	0/1:2,5:8:39:213,0,39	1/1:8,12:21:29.89:684,30,0
chr10	57129992	.	CAT	C	5029.27	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=9.029;DP=421;FS=13.568;HRun=0;HaplotypeScore=68.0731;InbreedingCoeff=0.9667;MQ=76.27;MQ0=2;MQRankSum=-0.317;QD=30.85;ReadPosRankSum=2.908;VQSLOD=5.7882;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:78.27:0,78,1330	0/0:6,0:6:12.04:0,12,206	0/0:15,0:14:16.26:0,16,301	0/0:21,0:16:23.98:0,24,304	0/0:28,0:28:81.28:0,81,1383	0/0:13,0:13:33.11:0,33,561	0/0:20,0:20:51.17:0,51,870	0/0:28,0:28:75.24:0,75,1234	1/1:2,12:14:27.09:355,27,0	1/1:1,14:15:42.14:550,42,0	1/1:1,6:7:12.04:158,12,0	0/0:10,0:10:18.06:0,18,305	0/0:13,0:13:36.12:0,36,612	0/0:7,0:7:18.06:0,18,308	1/1:0,17:17:48.16:631,48,0	0/0:16,0:16:42.14:0,42,720	0/0:20,0:20:57.15:0,57,912	0/0:11,0:11:33.11:0,33,565	1/1:0,10:9:27.09:355,27,0	1/1:1,8:9:15.05:189,15,0	1/1:2,15:16:42.14:552,42,0	0/0:6,0:6:15.05:0,15,257	0/0:4,0:3:6.02:0,6,102	0/0:9,0:9:24.07:0,24,385	1/1:0,16:16:33.11:428,33,0	1/1:6,15:21:45.15:591,45,0	1/1:1,17:18:48.16:631,48,0	1/1:2,17:19:45.15:591,45,0
chr10	57130132	.	C	CTGTG	4270.80	PASS	AB=0.735;AC=38;AF=0.731;AN=52;BaseQRankSum=1.914;DP=622;FS=3.811;HRun=0;HaplotypeScore=124.3116;InbreedingCoeff=0.1511;MQ=61.64;MQ0=13;MQRankSum=-0.703;QD=8.73;ReadPosRankSum=-1.381;VQSLOD=3.5756;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:39:57.16:0,57,848	1/1:7,0:11:11.81:208,12,0	./.	./.	0/1:22,1:23:47.31:47,0,286	1/1:16,12:28:18.06:428,18,0	1/1:14,7:24:25.90:575,26,0	0/1:25,0:30:30.31:71,0,30	1/1:14,0:26:1.82:87,2,0	1/1:12,0:22:13.70:81,14,0	1/1:5,0:16:19.21:85,19,0	1/1:12,2:15:6.02:139,6,0	0/0:15,0:17:27.08:0,27,402	0/0:13,0:16:21.05:0,21,271	0/1:10,0:17:25.20:62,0,25	1/1:8,9:19:14.41:239,14,0	1/1:15,0:22:9.03:133,9,0	1/1:13,0:17:12.04:205,12,0	1/1:13,0:14:11.73:85,12,0	0/1:11,0:22:28.71:47,0,29	1/1:21,10:34:18.06:428,18,0	1/1:11,4:16:3.01:71,3,0	1/1:9,8:18:15.05:356,15,0	1/1:9,13:24:29.84:655,30,0	0/1:10,0:20:43.11:60,0,43	0/1:11,0:24:3.71:102,0,4	0/1:16,0:30:45.79:54,0,46	0/1:7,0:12:50.90:51,0,72
chr10	57131886	.	AT	A	4770.98	PASS	AB=0.889;AC=27;AF=0.482;AN=56;BaseQRankSum=9.842;DP=460;FS=1.219;HRun=10;HaplotypeScore=48.1785;InbreedingCoeff=0.9565;MQ=71.63;MQ0=0;MQRankSum=-1.061;QD=19.71;ReadPosRankSum=2.065;VQSLOD=5.6796;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:33.09:0,33,365	1/1:0,9:9:26.99:234,27,0	0/0:15,0:14:23.83:0,24,186	0/1:7,1:7:1.22:1,0,54	0/0:23,0:23:60.16:0,60,664	0/0:18,0:18:45.11:0,45,489	0/0:8,0:8:21.06:0,21,232	1/1:6,21:27:32.80:514,33,0	1/1:1,9:10:24:208,24,0	1/1:7,26:33:47.60:621,48,0	1/1:2,13:15:38.95:331,39,0	0/0:14,0:14:39.07:0,39,412	0/0:10,0:10:27.07:0,27,299	0/0:16,0:16:39.09:0,39,423	1/1:3,9:12:26.99:234,27,0	0/0:9,0:9:27.06:0,27,291	0/0:31,0:31:81.22:0,81,896	0/0:14,0:14:39.11:0,39,431	1/1:7,17:24:50.97:443,51,0	1/1:3,24:27:65.97:573,66,0	1/1:3,10:13:26.98:234,27,0	0/0:15,0:15:39.09:0,39,423	0/0:19,0:19:39.10:0,39,429	0/0:11,0:11:27.07:0,27,298	1/1:2,15:17:41.99:365,42,0	1/1:0,20:20:59.97:517,60,0	1/1:3,9:12:20.99:182,21,0	1/1:1,14:15:35.99:313,36,0
chr10	57133493	.	G	GA	4928.14	PASS	AB=0.800;AC=22;AF=0.393;AN=56;BaseQRankSum=-5.646;DP=521;FS=0.000;HRun=10;HaplotypeScore=63.7253;InbreedingCoeff=0.8826;MQ=60.44;MQ0=16;MQRankSum=0.113;QD=20.71;ReadPosRankSum=2.509;VQSLOD=5.7791;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:89.86:0,90,736	0/1:3,4:9:6.81:112,0,7	0/0:14,0:5:13.99:0,14,100	0/1:15,0:5:2.97:3,0,36	0/0:22,0:22:52.94:0,53,421	1/1:2,18:20:45.11:480,45,0	1/1:3,18:20:45.11:480,45,0	1/1:18,16:33:56.80:568,57,0	0/0:11,0:11:26.95:0,27,221	0/0:23,0:23:59.92:0,60,492	0/0:13,0:14:25.98:0,26,203	1/1:7,11:18:39.02:401,39,0	0/0:14,0:14:32.94:0,33,270	0/0:22,0:22:59.72:0,60,492	0/0:12,0:12:29.24:0,29,245	1/1:2,8:10:24.06:256,24,0	1/1:3,29:32:59.57:839,60,0	1/1:5,16:21:45.11:480,45,0	0/0:28,0:27:61.93:0,62,495	0/0:10,0:9:20.89:0,21,165	0/0:18,0:18:47.94:0,48,394	1/1:1,10:12:26.94:271,27,0	1/1:3,8:13:20.31:188,20,0	1/1:6,25:33:60.22:851,60,0	0/0:11,0:11:26.95:0,27,221	0/0:20,0:20:47.92:0,48,394	0/0:13,0:13:26.93:0,27,216	0/0:12,0:12:31.67:0,32,231
chr10	57135437	.	GAAAAAA	G	5283.29	PASS	AB=0.667;AC=25;AF=0.446;AN=56;BaseQRankSum=-2.885;DP=511;FS=8.845;HRun=17;HaplotypeScore=120.7651;InbreedingCoeff=0.8584;MQ=59.26;MQ0=7;MQRankSum=-7.937;QD=21.92;ReadPosRankSum=3.046;VQSLOD=1.4218;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:32.99:0,33,629	1/1:0,5:6:11.98:192,12,0	0/0:12,0:5:1.18:0,1,21	0/0:21,0:10:8.86:0,9,131	0/0:22,0:27:57.97:0,58,974	0/0:20,0:22:57.18:0,57,1244	0/0:21,0:22:57.17:0,57,1221	1/1:10,13:23:33.13:403,33,0	1/1:5,16:21:23.81:419,24,0	1/1:11,18:28:50.64:755,51,0	1/1:7,18:27:40.34:650,40,0	0/0:14,0:15:30.09:0,30,641	0/0:14,0:14:33.10:0,33,741	0/0:7,0:9:21.07:0,21,529	1/1:2,16:19:26.56:448,27,0	0/0:15,0:16:41.88:0,42,1004	0/0:25,0:25:57.14:0,57,1177	0/0:25,0:25:57.13:0,57,1242	1/1:5,8:12:1.54:243,2,0	1/1:8,14:24:28.32:445,28,0	1/1:3,5:8:11.96:209,12,0	0/0:19,0:17:47.96:0,48,816	0/0:12,0:13:30.09:0,30,553	0/0:9,0:11:23.44:0,23,536	1/1:2,17:21:29.79:452,30,0	1/1:9,17:26:34.66:632,35,0	1/1:1,12:13:12.03:209,12,0	0/1:5,4:10:6.05:226,0,6
chr10	57135451	.	A	AG	3038.87	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=-9.395;DP=549;FS=0.821;HRun=0;HaplotypeScore=95.5031;InbreedingCoeff=0.8637;MQ=64.53;MQ0=14;MQRankSum=6.666;QD=14.54;ReadPosRankSum=4.958;VQSLOD=5.2548;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:51.98:0,52,467	0/0:7,0:7:17.43:0,17,98	0/0:30,0:10:10.51:0,11,85	0/1:36,0:16:13:13,0,120	0/0:28,0:28:65.44:0,65,555	1/1:12,9:22:42.92:424,43,0	1/1:4,20:25:36.78:481,37,0	0/0:23,0:21:50.56:0,51,337	0/0:19,0:19:31.97:0,32,189	0/0:30,0:29:77.37:0,77,504	0/0:25,0:25:70.03:0,70,461	1/1:5,8:13:2.52:183,3,0	0/0:15,0:15:38.54:0,39,413	0/0:11,0:11:29.96:0,30,279	0/0:18,0:18:31.98:0,32,186	1/1:8,9:17:32.62:419,33,0	1/1:1,18:20:46.37:512,46,0	1/1:6,24:30:6.48:473,6,0	0/0:17,0:17:44.42:0,44,335	0/0:22,0:22:52.50:0,53,321	0/0:7,0:7:11.50:0,12,59	1/1:5,12:15:25.48:272,25,0	1/1:3,10:14:29.36:291,29,0	1/1:4,10:13:19.90:177,20,0	0/0:23,0:23:37.77:0,38,227	0/0:23,0:23:55.39:0,55,368	0/0:16,0:16:23.45:0,23,153	0/0:7,0:7:20.39:0,20,120
chr10	57136162	.	GTGCC	G	212.25	PASS	AB=0.972;AC=10;AF=0.179;AN=56;BaseQRankSum=-0.664;DP=869;FS=4.547;HRun=0;HaplotypeScore=337.1382;InbreedingCoeff=-0.0577;MQ=47.73;MQ0=18;MQRankSum=-1.713;QD=0.76;ReadPosRankSum=-7.983;VQSLOD=-0.2761;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:41:8.14:0,8,152	0/0:15,0:15:1.15:0,1,34	0/0:23,0:9:2.48:0,2,117	0/1:47,0:21:12.51:13,0,208	0/0:31,0:31:20.86:0,21,356	0/0:27,0:26:8.87:0,9,173	0/0:27,0:26:4.80:0,5,62	0/0:36,0:28:44.76:0,45,719	0/1:41,1:38:34.65:35,0,365	0/1:44,2:41:73.40:73,0,1742	1/1:28,0:25:2.71:20,3,0	0/0:42,0:42:44.50:0,45,913	0/0:30,0:29:28.60:0,29,971	0/0:37,0:35:38.48:0,38,717	0/0:43,1:41:2.53:0,3,47	0/0:29,0:28:25.86:0,26,474	0/0:31,0:31:5.27:0,5,672	0/1:20,0:20:25.20:25,0,422	0/1:16,0:14:59.23:59,0,254	0/0:25,0:23:2.24:0,2,11	0/0:50,0:47:0:0,0,1	0/0:38,0:36:17.70:0,18,308	0/0:24,0:22:8.55:0,9,176	0/0:32,0:32:2.25:0,2,47	0/1:18,2:18:0:0,0,0	0/1:39,1:34:51.20:51,0,1259	0/1:20,1:15:63.73:64,0,354	0/0:4,0:4:9.03:0,9,164
chr10	57136178	.	C	CTCTG	3496.15	PASS	AB=0.879;AC=16;AF=0.286;AN=56;BaseQRankSum=-4.366;DP=951;FS=11.710;HRun=0;HaplotypeScore=289.4082;InbreedingCoeff=0.1930;MQ=44.32;MQ0=26;MQRankSum=1.176;QD=8.55;ReadPosRankSum=-5.446;VQSLOD=0.7678;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:44:26.78:0,27,498	0/0:9,5:14:0.22:0,0,10	0/1:24,0:6:9.41:9,0,48	0/0:51,0:23:37.59:0,38,412	0/0:27,0:27:30.10:0,30,596	0/0:30,0:29:42.11:0,42,720	0/0:26,0:26:22.43:0,22,463	0/0:38,0:26:15.54:0,16,897	0/1:34,10:41:99:353,0,178	0/1:39,8:41:99:751,0,1099	1/1:22,5:25:8.90:151,9,0	0/0:44,0:44:53.70:0,54,1246	0/0:30,0:29:60.45:0,60,1033	0/0:39,0:37:60.66:0,61,1131	1/1:39,5:43:14.71:329,15,0	0/0:32,0:32:51.16:0,51,958	0/0:35,0:35:68.85:0,69,1162	0/0:29,0:29:68.39:0,68,1119	0/1:25,3:19:99:379,0,277	0/1:27,2:28:50.59:221,0,51	1/1:54,7:60:2.22:46,2,0	0/0:40,0:39:29.96:0,30,551	0/0:28,0:26:39.12:0,39,728	0/0:33,0:33:15.03:0,15,263	1/1:14,6:18:6.02:114,6,0	0/1:39,10:43:99:762,0,1105	0/1:16,6:18:99:323,0,295	0/1:5,0:5:31.83:57,0,32
chr10	57136548	.	CTG	C	11360.57	PASS	AB=0.661;AC=21;AF=0.375;AN=56;BaseQRankSum=10.139;DP=1332;FS=1.700;HRun=0;HaplotypeScore=186.5180;InbreedingCoeff=0.4286;MQ=55.77;MQ0=69;MQRankSum=1.326;QD=16.63;ReadPosRankSum=0.714;VQSLOD=5.0531;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:56,3:58:24.32:24,0,1546	0/1:6,5:11:32.15:99,0,32	0/0:45,0:11:24.39:0,24,239	0/0:63,0:13:18.50:0,19,269	0/0:29,2:31:1.12:0,1,933	0/0:36,0:36:68:0,68,1045	0/0:43,1:42:56.33:0,56,1278	1/1:24,26:42:68.83:783,69,0	1/1:13,28:41:46.04:630,46,0	1/1:16,65:78:14.39:2038,14,0	0/1:12,11:23:99:253,0,166	0/0:44,1:45:45.03:0,45,1131	0/0:47,3:51:80.45:0,80,1711	0/0:51,0:52:99:0,116,1960	1/1:9,46:53:74.88:922,75,0	0/0:41,1:42:59.31:0,59,1360	0/0:53,0:52:92.47:0,92,1719	0/0:48,0:47:61.86:0,62,1465	1/1:19,15:22:50.99:604,51,0	0/1:11,32:44:99:513,0,133	1/1:72,62:131:99:2938,121,0	0/0:40,0:40:82.42:0,82,1241	0/0:33,2:35:10.40:0,10,1081	0/0:60,1:61:58.83:0,59,1883	0/1:8,25:32:74.63:363,0,75	0/1:16,45:62:36.33:1361,0,36	0/1:8,16:24:37.35:299,0,37	1/1:12,7:17:45.13:534,45,0
chr10	57136698	.	C	CTG	8458.51	PASS	AB=0.938;AC=19;AF=0.339;AN=56;BaseQRankSum=-7.777;DP=1190;FS=2.509;HRun=0;HaplotypeScore=161.3912;InbreedingCoeff=0.9158;MQ=58.67;MQ0=33;MQRankSum=5.039;QD=24.81;ReadPosRankSum=3.170;VQSLOD=5.8834;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:59,0:59:99:0,129,1463	0/0:16,0:17:44.90:0,45,484	0/0:50,0:26:23.92:0,24,232	0/0:62,0:27:22.79:0,23,276	0/0:34,0:36:71.94:0,72,830	1/1:10,17:27:11.60:597,12,0	1/1:28,15:43:30.76:1101,31,0	0/0:48,0:45:80.97:0,81,822	0/0:40,0:38:72.20:0,72,860	0/0:59,0:60:99:0,132,1497	0/0:29,0:29:54.15:0,54,643	1/1:23,21:43:66.21:1011,66,0	0/0:50,0:53:99:0,120,1357	0/0:48,0:50:99:0,120,1320	0/0:46,0:44:93.22:0,93,1078	1/1:17,25:41:32.79:975,33,0	1/1:23,20:40:50.81:1101,51,0	1/1:14,14:27:22.09:766,22,0	0/0:38,0:27:57.13:0,57,654	0/0:35,0:33:68.78:0,69,736	0/0:120,0:118:99:0,246,2775	1/1:14,17:30:69.03:1020,69,0	1/1:11,10:21:42.09:605,42,0	1/1:19,27:45:36.15:1266,36,0	0/0:26,0:24:54.14:0,54,632	0/0:52,0:51:99:0,107,1374	0/0:23,0:23:33.07:0,33,375	0/1:13,1:15:15.46:15,0,308
chr10	57136756	.	G	GTC	11427.15	PASS	AB=1.000;AC=35;AF=0.625;AN=56;BaseQRankSum=16.165;DP=1013;FS=2.038;HRun=0;HaplotypeScore=182.6478;InbreedingCoeff=0.3498;MQ=58.15;MQ0=32;MQRankSum=2.490;QD=15.65;ReadPosRankSum=3.420;VQSLOD=4.9628;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:65,0:65:99:0,169,2183	1/1:10,0:9:21.03:202,21,0	0/0:39,0:20:51.34:0,51,601	0/0:57,0:24:31.46:0,31,404	0/0:34,0:34:95.93:0,96,1275	0/1:16,0:16:11.85:247,0,12	0/1:20,0:18:28.93:250,0,29	0/1:28,0:23:33.24:443,0,33	0/1:41,0:35:10.71:465,0,11	1/1:36,0:35:27.64:642,28,0	0/1:19,0:18:2.91:150,0,3	1/1:37,0:33:49.93:489,50,0	0/0:32,0:32:93.27:0,93,1285	0/0:56,0:56:99:0,153,2063	1/1:43,0:38:35.15:529,35,0	0/1:40,0:37:20.74:488,0,21	1/1:43,0:38:55.33:694,55,0	1/1:18,2:20:29.36:499,29,0	0/1:27,0:21:38.96:340,0,39	1/1:29,0:26:57.05:542,57,0	1/1:102,2:97:99:1778,141,0	0/1:30,0:29:2.20:355,0,2	1/1:22,0:21:42.06:405,42,0	1/1:53,1:52:99:1115,120,0	1/1:24,0:22:13.09:286,13,0	1/1:42,0:39:4.90:787,5,0	1/1:26,0:25:44.96:421,45,0	0/1:19,0:19:99:299,0,104
chr10	57136758	.	C	CTG	23311.16	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=0.618;DP=1037;FS=0.000;HRun=0;HaplotypeScore=149.0072;InbreedingCoeff=0.9965;MQ=58.60;MQ0=27;MQRankSum=3.219;QD=30.79;ReadPosRankSum=-1.047;VQSLOD=6.0614;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:63,0:63:99:0,157,2087	1/1:0,12:11:21.07:373,21,0	0/0:38,0:21:51.02:0,51,586	0/0:56,0:24:28.13:0,28,355	0/0:34,0:34:87.27:0,87,1189	1/1:5,11:16:30.10:526,30,0	1/1:3,17:19:22.38:522,22,0	1/1:9,23:30:75.12:1076,75,0	1/1:5,38:38:53.93:957,54,0	1/1:5,32:36:99:1536,99,0	1/1:1,18:18:18.06:319,18,0	1/1:6,30:32:57.16:946,57,0	0/0:32,0:32:93.26:0,93,1223	0/0:56,1:57:99:0,150,2031	1/1:2,43:40:56.70:1010,57,0	1/1:8,33:40:59.96:1041,60,0	1/1:14,29:38:77.33:1307,77,0	1/1:9,13:22:34.20:805,34,0	1/1:8,19:21:51.16:812,51,0	1/1:2,27:27:56.95:1010,57,0	1/1:41,61:95:99:3690,227,0	1/1:9,21:30:51.12:809,51,0	1/1:2,22:23:42.14:745,42,0	1/1:21,35:54:99:2091,123,0	1/1:2,23:24:33.11:585,33,0	1/1:4,39:40:99:1792,108,0	1/1:1,25:25:45.15:778,45,0	1/1:7,12:19:33.11:581,33,0
chr10	57137201	.	GT	G	15848.98	PASS	AB=0.897;AC=53;AF=0.946;AN=56;BaseQRankSum=-4.552;DP=479;FS=1.123;HRun=1;HaplotypeScore=85.8726;InbreedingCoeff=0.6228;MQ=60.24;MQ0=11;MQRankSum=-1.774;QD=34.53;ReadPosRankSum=2.794;VQSLOD=4.9552;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,31:31:90.30:1258,90,0	1/1:0,8:8:21.07:292,21,0	0/0:20,0:8:21:0,21,195	0/1:23,3:12:99:103,0,138	1/1:0,25:24:64.84:917,65,0	1/1:0,17:17:46.45:663,46,0	1/1:1,24:24:63.12:876,63,0	1/1:0,23:22:66.21:906,66,0	1/1:0,16:16:48.16:670,48,0	1/1:1,23:23:66.21:910,66,0	1/1:0,14:14:32.35:459,32,0	1/1:0,19:19:57.19:788,57,0	1/1:0,11:12:30.07:398,30,0	1/1:1,17:19:54.18:749,54,0	1/1:0,10:10:30.10:419,30,0	1/1:0,24:23:61.51:877,62,0	1/1:0,15:14:39.13:545,39,0	1/1:0,13:13:29.86:417,30,0	1/1:0,17:17:51.14:673,51,0	1/1:0,15:14:39.13:540,39,0	1/1:1,12:11:24.08:335,24,0	1/1:1,16:17:39.04:544,39,0	1/1:0,11:11:20.90:292,21,0	1/1:0,12:12:20.97:293,21,0	1/1:0,14:13:33.11:460,33,0	1/1:0,19:18:54.18:755,54,0	1/1:1,15:15:39.13:542,39,0	1/1:0,4:4:12.04:168,12,0
chr10	57137207	.	T	TACAC	5815.13	PASS	AB=1.000;AC=40;AF=0.800;AN=50;BaseQRankSum=-0.218;DP=583;FS=10.684;HRun=0;HaplotypeScore=205.0152;InbreedingCoeff=0.6047;MQ=54.74;MQ0=12;MQRankSum=-4.527;QD=13.91;ReadPosRankSum=-1.465;VQSLOD=3.4726;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:36.57:0,37,547	1/1:10,0:11:6.02:97,6,0	./.	./.	0/0:26,0:26:1.31:0,1,306	1/1:16,6:23:32.71:640,33,0	1/1:27,1:27:29.47:437,29,0	1/1:24,0:24:6.64:80,7,0	1/1:21,0:22:6.88:171,7,0	1/1:30,0:29:17.89:223,18,0	0/1:16,0:16:0.02:0,0,0	1/1:21,4:26:38.75:613,39,0	0/0:13,0:13:18.06:0,18,282	0/0:20,0:22:17.50:0,17,359	1/1:13,0:14:12.04:203,12,0	1/1:20,6:25:39.12:757,39,0	1/1:15,3:17:18.02:338,18,0	1/1:13,1:15:11.78:216,12,0	1/1:23,0:23:18.51:260,19,0	1/1:17,0:15:9.02:148,9,0	./.	1/1:16,1:17:6.01:96,6,0	1/1:9,1:10:9.01:164,9,0	1/1:15,0:15:2.82:42,3,0	1/1:17,0:18:6.02:101,6,0	1/1:32,0:32:40.47:689,40,0	1/1:23,0:22:22.43:361,22,0	0/1:6,0:6:11.92:178,0,12
chr10	57137640	.	C	CG	3487.12	PASS	AB=1.000;AC=19;AF=0.352;AN=54;BaseQRankSum=1.077;DP=425;FS=3.512;HRun=1;HaplotypeScore=73.2110;InbreedingCoeff=0.9339;MQ=40.16;MQ0=26;MQRankSum=-4.474;QD=24.05;ReadPosRankSum=-0.690;VQSLOD=3.4351;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:25:57.15:0,57,694	0/0:9,0:8:17.96:0,18,174	0/1:4,0:2:3.36:4,0,3	./.	0/0:17,0:16:42.12:0,42,526	1/1:5,8:13:30.04:383,30,0	1/1:8,12:18:42.02:570,42,0	0/0:20,0:20:36.57:0,37,526	0/0:21,0:19:36.07:0,36,444	0/0:14,0:11:32.97:0,33,376	0/0:15,0:15:30:0,30,323	1/1:4,4:8:12.03:159,12,0	0/0:16,0:16:42.13:0,42,537	0/0:16,0:16:42.11:0,42,504	0/0:19,0:19:36.03:0,36,426	1/1:8,13:20:47.90:601,48,0	1/1:8,9:15:30.07:421,30,0	1/1:6,3:6:12:153,12,0	0/0:22,0:20:47.87:0,48,523	0/0:19,0:17:36.05:0,36,429	0/0:13,0:10:18.39:0,18,162	1/1:5,12:17:33.07:423,33,0	1/1:8,7:15:17.97:237,18,0	1/1:6,15:18:38.84:537,39,0	0/0:10,0:10:27.09:0,27,346	0/0:17,0:16:48.14:0,48,591	0/0:15,0:15:42.04:0,42,467	0/0:8,0:4:8.92:0,9,93
chr10	57137653	.	C	CAAA	6059.07	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=3.345;DP=488;FS=2.216;HRun=14;HaplotypeScore=85.6667;InbreedingCoeff=0.8314;MQ=43.72;MQ0=21;MQRankSum=-4.638;QD=15.54;ReadPosRankSum=-2.673;VQSLOD=3.2015;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:17.31:0,17,361	1/1:4,1:8:2.49:5,2,0	0/0:12,0:5:5.69:0,6,51	0/0:7,0:5:2.74:0,3,18	0/0:11,0:15:23.83:0,24,232	1/1:5,2:15:29.99:344,30,0	1/1:14,6:19:24.06:347,24,0	1/1:13,0:24:14.21:48,14,0	1/1:17,5:22:21.05:325,21,0	1/1:9,6:17:25.28:337,25,0	1/1:12,1:14:8.51:91,9,0	1/1:9,1:11:10.28:141,10,0	0/0:18,0:19:27.54:0,28,305	0/0:14,0:14:14.40:0,14,153	1/1:14,9:26:24.04:346,24,0	1/1:10,8:20:25.30:375,25,0	1/1:12,9:22:24.53:378,25,0	1/1:5,2:5:4.26:55,4,0	1/1:19,3:22:19.28:253,19,0	1/1:12,5:20:25.30:337,25,0	1/1:9,2:8:15.51:206,16,0	1/1:6,10:19:39.11:576,39,0	1/1:4,4:13:26.94:336,27,0	1/1:10,7:15:21.05:323,21,0	1/1:6,7:14:15.05:260,15,0	1/1:13,8:26:36.27:396,36,0	1/1:10,3:19:38.93:452,39,0	1/1:6,2:5:9.01:127,9,0
chr10	57139999	.	AACAC	A	6255.05	PASS	AB=0.676;AC=30;AF=0.536;AN=56;BaseQRankSum=-0.436;DP=842;FS=1.324;HRun=0;HaplotypeScore=151.7503;InbreedingCoeff=0.4078;MQ=58.91;MQ0=23;MQRankSum=2.227;QD=11.44;ReadPosRankSum=0.849;VQSLOD=4.2073;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:33:55.13:0,55,1044	0/1:9,0:14:58.22:58,0,90	0/0:38,0:15:5.91:0,6,48	0/0:40,0:13:2.88:0,3,15	0/0:31,0:31:56.57:0,57,1103	0/1:10,1:26:49.81:60,0,50	0/1:11,1:20:24.32:125,0,24	0/1:25,0:30:11.23:11,0,95	1/1:7,19:26:30.10:467,30,0	1/1:10,19:30:54.01:724,54,0	1/1:2,12:15:23.90:274,24,0	0/1:9,1:26:52.04:62,0,52	0/0:29,0:29:28.44:0,28,1212	0/0:29,0:31:58.93:0,59,1046	1/1:9,23:34:39.09:566,39,0	0/1:11,1:27:68.35:68,0,71	0/1:12,1:35:32.05:32,0,44	0/0:8,0:24:28.13:0,28,190	1/1:12,12:23:8.37:354,8,0	1/1:13,16:29:41.53:558,42,0	1/1:33,1:33:13.97:225,14,0	0/0:18,0:42:27.75:0,28,132	0/0:4,0:24:16.54:0,17,79	0/1:26,0:42:1.53:2,0,106	1/1:9,29:38:30.10:473,30,0	1/1:12,32:45:90.60:1263,91,0	1/1:7,19:27:29.82:468,30,0	1/1:4,16:20:30.10:466,30,0
chr10	57142519	.	TTCTTCTTCCTCTTCTTCC	T	14438.09	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=9.702;DP=702;FS=1.751;HRun=0;HaplotypeScore=318.2272;InbreedingCoeff=0.8123;MQ=64.42;MQ0=5;MQRankSum=-6.505;QD=27.55;ReadPosRankSum=-0.751;VQSLOD=2.5285;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:70.37:0,70,4260	1/1:5,9:14:4.33:287,4,0	0/0:28,0:19:5.84:0,6,43	0/0:33,0:25:6.16:0,6,33	0/0:31,0:31:51.16:0,51,3579	1/1:8,12:19:6.02:290,6,0	1/1:13,0:13:8.99:122,9,0	1/1:26,0:24:12.04:216,12,0	1/1:5,12:17:9.03:390,9,0	1/1:12,17:29:50.84:1405,51,0	1/1:8,17:25:23.16:875,23,0	1/1:7,12:19:24.08:1140,24,0	0/0:26,0:26:54.19:0,54,4065	0/0:15,0:15:36.07:0,36,1930	1/1:14,11:25:14.68:725,15,0	1/1:10,15:25:15.05:726,15,0	1/1:22,0:22:14.59:142,15,0	1/1:15,7:22:2.80:145,3,0	1/1:18,6:22:17.96:380,18,0	1/1:17,19:35:32.91:971,33,0	1/1:16,0:16:17.76:128,18,0	1/1:12,20:32:20.37:629,20,0	1/1:15,20:35:25.77:1209,26,0	1/1:12,7:19:6.02:199,6,0	1/1:13,22:35:33.11:1593,33,0	1/1:11,10:21:26.93:691,27,0	1/1:10,28:38:30.06:1449,30,0	1/1:6,5:11:15.05:726,15,0
chr10	57143312	.	AAAAG	A	2555.29	PASS	AB=1.000;AC=33;AF=0.589;AN=56;BaseQRankSum=2.072;DP=409;FS=57.621;HRun=0;HaplotypeScore=79.3731;InbreedingCoeff=0.0394;MQ=46.80;MQ0=12;MQRankSum=-2.526;QD=8.16;ReadPosRankSum=-2.319;VQSLOD=-0.6842;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:38:84.06:0,84,1584	0/1:5,0:5:8.86:9,0,85	0/1:26,0:2:4.76:5,0,14	0/1:20,0:3:7.37:7,0,52	0/0:32,0:32:85.37:0,85,1670	1/1:1,19:20:23.91:397,24,0	1/1:3,12:13:18.06:298,18,0	0/1:22,0:21:43.40:43,0,133	0/1:7,0:6:28.88:29,0,95	0/1:14,0:14:64.55:65,0,94	0/1:11,0:10:49.88:50,0,85	1/1:1,8:9:6.02:99,6,0	0/0:6,0:6:14.84:0,15,249	0/0:9,0:9:20.99:0,21,329	0/1:9,0:8:19.61:34,0,20	1/1:4,9:13:13.11:270,13,0	1/1:4,20:23:27.09:445,27,0	1/1:1,8:8:9.03:149,9,0	0/1:17,0:16:22.01:46,0,22	0/1:21,0:20:22.08:22,0,39	1/1:3,0:3:2.82:20,3,0	1/1:4,4:7:15:199,15,0	1/1:10,5:13:29.87:359,30,0	1/1:3,0:3:5.97:53,6,0	0/1:10,0:8:9.61:10,0,146	0/1:16,0:15:7.32:100,0,7	0/1:16,0:11:30.56:31,0,199	0/0:10,0:9:13.47:0,13,208
chr10	57143313	.	AAAG	A	2034.06	PASS	AB=1.000;AC=36;AF=0.643;AN=56;BaseQRankSum=3.928;DP=410;FS=48.272;HRun=0;HaplotypeScore=76.2663;InbreedingCoeff=0.0855;MQ=47.25;MQ0=11;MQRankSum=-3.271;QD=6.34;ReadPosRankSum=-2.580;VQSLOD=-0.1018;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:39:88.31:0,88,1336	0/1:5,0:5:8.52:9,0,45	0/1:27,0:3:1.36:1,0,41	0/1:20,0:3:15.65:16,0,42	0/0:33,0:33:91.09:0,91,1465	1/1:20,0:20:24.04:233,24,0	1/1:14,1:13:18.03:175,18,0	0/1:22,0:21:56.14:56,0,65	0/1:7,0:6:28.33:28,0,50	0/1:13,0:13:37.10:95,0,37	0/1:11,0:10:44.08:53,0,44	1/1:9,0:9:6.01:57,6,0	0/0:6,0:6:14.26:0,14,194	0/0:10,0:10:23.99:0,24,326	0/1:8,0:7:5.25:33,0,5	1/1:11,2:13:12.97:218,13,0	1/1:23,1:23:27.04:261,27,0	1/1:9,0:8:9.01:87,9,0	0/1:17,0:16:3.42:154,0,3	1/1:21,0:20:3.19:65,3,0	1/1:3,0:3:2.63:20,3,0	1/1:8,0:7:14.97:131,15,0	1/1:15,0:13:29.32:263,29,0	1/1:3,0:3:3.47:27,3,0	0/1:10,0:8:13.04:13,0,77	1/1:17,0:16:25.60:179,26,0	0/1:16,0:11:26.83:27,0,114	0/1:8,0:8:7.85:8,0,122
chr10	57144474	.	AGATT	A	1682.20	PASS	AB=0.988;AC=25;AF=0.446;AN=56;BaseQRankSum=9.941;DP=594;FS=0.000;HRun=0;HaplotypeScore=158.2441;InbreedingCoeff=-0.5180;MQ=68.14;MQ0=8;MQRankSum=-6.160;QD=3.47;ReadPosRankSum=4.869;VQSLOD=2.3746;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:74.93:0,75,1656	0/1:9,0:9:27.50:85,0,27	0/1:52,0:24:11.28:11,0,568	0/1:68,0:30:17.88:18,0,460	0/0:25,0:24:63.13:0,63,1670	0/1:25,1:26:99:111,0,269	0/1:13,0:13:23.42:23,0,57	0/1:26,0:25:99:101,0,249	0/1:17,2:19:99:103,0,192	0/1:13,0:13:14.76:15,0,40	0/1:12,0:12:43.37:43,0,64	0/1:10,0:10:41.65:42,0,53	0/0:14,0:14:36.12:0,36,882	0/0:23,0:23:48.15:0,48,1185	0/1:19,1:20:30.85:78,0,31	0/1:15,0:15:67.69:111,0,68	0/1:29,0:28:51.01:51,0,179	0/1:15,0:15:47.39:47,0,71	0/1:13,0:13:17.51:18,0,144	0/1:26,0:26:71.99:208,0,72	0/1:10,0:10:4.61:5,0,142	0/1:19,1:20:83.78:84,0,208	0/1:22,0:21:80.90:81,0,141	0/0:21,0:21:2.39:0,2,101	0/1:16,0:16:25.17:25,0,89	0/1:17,0:17:99:151,0,134	1/1:21,1:22:17.34:344,17,0	1/1:9,0:9:18.08:91,18,0
chr10	57144478	.	TGAGA	T	9950.22	PASS	AB=0.652;AC=36;AF=0.643;AN=56;BaseQRankSum=1.650;DP=587;FS=16.550;HRun=0;HaplotypeScore=129.3389;InbreedingCoeff=0.3925;MQ=66.45;MQ0=11;MQRankSum=-5.192;QD=27.26;ReadPosRankSum=1.961;VQSLOD=3.5981;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:68.69:0,69,1482	1/1:2,7:9:1.85:301,2,0	0/0:56,0:22:15.19:0,15,527	0/0:74,0:30:22.22:0,22,439	0/0:26,0:25:69.15:0,69,1621	0/1:9,14:23:3.35:437,0,3	1/1:4,8:12:20.92:260,21,0	1/1:6,18:23:60.14:992,60,0	0/1:15,2:17:23.68:420,0,24	1/1:1,12:13:30.05:529,30,0	1/1:4,6:10:24.03:380,24,0	0/1:4,5:9:20.17:98,0,20	0/0:14,0:14:27.09:0,27,694	0/0:23,0:23:45.15:0,45,1109	1/1:3,15:18:27.05:442,27,0	1/1:6,9:15:39.13:693,39,0	1/1:6,22:27:24.55:428,25,0	0/1:4,12:16:5.28:248,0,5	1/1:2,10:12:27.06:460,27,0	1/1:3,24:27:61.05:1092,61,0	1/1:7,2:9:12.47:179,12,0	0/1:9,11:20:5.55:494,0,6	1/1:6,15:20:24.08:422,24,0	0/1:7,14:21:38.06:182,0,38	0/1:3,12:15:30.34:147,0,30	0/1:8,7:15:74.82:439,0,75	1/1:13,9:22:36.11:980,36,0	1/1:4,5:9:16.53:329,17,0
chr10	57144487	.	GAGAT	G	6040.69	PASS	AB=0.978;AC=35;AF=0.625;AN=56;BaseQRankSum=4.053;DP=597;FS=17.573;HRun=0;HaplotypeScore=150.3126;InbreedingCoeff=0.3479;MQ=64.18;MQ0=17;MQRankSum=-4.404;QD=16.64;ReadPosRankSum=2.160;VQSLOD=3.6015;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:65.09:0,65,1596	1/1:9,0:10:19.61:223,20,0	0/0:64,0:23:22.26:0,22,530	0/0:80,0:27:7.61:0,8,451	0/0:28,0:27:55.71:0,56,1711	0/1:19,1:20:8.56:268,0,9	1/1:13,0:13:18.87:169,19,0	0/1:24,0:23:7.90:509,0,8	0/1:16,0:16:2.35:254,0,2	1/1:13,0:13:26.03:285,26,0	0/1:9,1:10:7.74:181,0,8	0/1:8,0:8:0.62:67,0,1	0/0:12,0:12:27.09:0,27,748	0/0:22,0:22:48.03:0,48,1196	1/1:17,1:18:25.30:300,25,0	1/1:16,0:16:39.97:415,40,0	1/1:25,0:24:26.73:271,27,0	0/1:15,0:15:4.68:153,0,5	1/1:14,0:13:11.89:239,12,0	1/1:25,1:26:65.91:693,66,0	1/1:7,0:7:10.73:95,11,0	1/1:19,0:19:4.06:314,4,0	1/1:21,0:20:3.94:247,4,0	0/1:21,0:21:47.89:89,0,48	0/1:16,0:16:16.11:99,0,16	0/1:14,1:15:55.64:302,0,56	1/1:24,0:24:43.52:649,44,0	1/1:12,0:12:16.56:219,17,0
chr10	57145060	.	C	CA	688.04	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-4.199;DP=656;FS=13.635;HRun=10;HaplotypeScore=83.0992;InbreedingCoeff=0.9861;MQ=63.44;MQ0=4;MQRankSum=0.137;QD=16.38;ReadPosRankSum=-2.858;VQSLOD=2.0815;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:92.88:0,93,763	1/1:2,10:13:23.89:237,24,0	0/0:20,0:13:16.96:0,17,123	0/0:24,0:17:25.74:0,26,184	0/0:30,2:32:51.89:0,52,633	0/0:17,0:17:50.94:0,51,418	0/0:20,0:20:44.93:0,45,369	1/1:10,17:29:58.69:572,59,0	0/0:30,0:30:80.89:0,81,665	0/0:22,1:23:15.91:0,16,334	0/0:25,0:25:62.91:0,63,516	0/0:18,0:17:47.94:0,48,394	0/0:19,0:19:41.41:0,41,316	0/0:18,0:18:41.90:0,42,338	0/0:18,0:19:43.58:0,44,336	0/0:22,0:23:58.95:0,59,474	0/0:29,0:30:79.89:0,80,642	0/0:23,0:24:44.29:0,44,416	0/0:21,0:21:61.97:0,62,498	0/0:25,0:25:65.90:0,66,539	0/0:21,0:23:46.97:0,47,375	0/0:27,0:27:62.89:0,63,514	0/0:16,0:16:38.92:0,39,316	0/0:23,0:23:43.39:0,43,431	0/0:14,0:14:38.96:0,39,320	0/0:29,0:29:59.89:0,60,492	0/0:30,0:30:74.87:0,75,614	0/0:24,0:24:65.89:0,66,538
chr10	57146880	.	GTCTCTCTC	G	1864.67	PASS	AB=0.992;AC=22;AF=0.407;AN=54;BaseQRankSum=6.861;DP=667;FS=6.533;HRun=0;HaplotypeScore=179.4014;InbreedingCoeff=0.2487;MQ=60.27;MQ0=16;MQRankSum=-7.225;QD=4.78;ReadPosRankSum=-2.326;VQSLOD=1.9536;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:35:78:0,78,2397	./.	0/0:32,0:13:20.86:0,21,453	0/0:36,0:22:32.63:0,33,806	0/0:20,0:20:33.09:0,33,1175	0/1:20,0:21:0:0,0,0	1/1:27,0:26:3.01:67,3,0	1/1:8,9:17:27.09:683,27,0	0/1:32,0:32:14.06:67,0,14	0/1:36,0:36:69.77:70,0,306	0/0:14,0:14:2.70:0,3,50	0/0:15,0:15:0:0,0,0	0/0:15,0:15:33.11:0,33,1150	0/0:25,0:25:57.18:0,57,1863	0/1:28,0:28:8.71:151,0,9	1/1:21,1:22:12.04:242,12,0	1/1:15,0:15:3.01:57,3,0	0/1:24,0:24:60.72:258,0,61	0/0:23,0:22:25.92:0,26,201	1/1:19,0:19:3.01:30,3,0	0/0:41,0:39:6:0,6,74	0/1:20,0:20:0.15:0,0,0	0/1:18,0:17:0:1,0,0	1/1:30,0:30:12:214,12,0	0/1:25,0:25:10.73:11,0,118	0/1:31,0:31:47.81:48,0,132	0/1:24,0:25:64.71:126,0,65	0/0:20,0:20:13.36:0,13,202
chr10	57146893	.	TCTCTCTCTCTCA	T	2702.91	PASS	AB=0.882;AC=26;AF=0.464;AN=56;BaseQRankSum=9.043;DP=687;FS=16.851;HRun=0;HaplotypeScore=189.7196;InbreedingCoeff=0.0431;MQ=54.28;MQ0=20;MQRankSum=-7.911;QD=5.94;ReadPosRankSum=1.711;VQSLOD=1.8901;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:38:87.30:0,87,3555	1/1:1,0:1:2.90:16,3,0	0/0:27,0:8:21.07:0,21,634	0/0:27,0:13:32.56:0,33,1067	0/0:21,0:21:45.15:0,45,2052	0/1:4,16:19:0:0,0,0	1/1:5,22:27:3.48:86,3,0	0/1:20,0:19:99:440,0,138	0/1:36,0:35:48.39:227,0,48	0/1:35,0:35:99:103,0,767	0/0:14,0:14:2.54:0,3,74	0/1:0,19:19:0.29:0,0,0	0/0:19,0:19:51.16:0,51,1887	0/0:29,0:29:75.22:0,75,2954	0/1:31,0:31:32.93:256,0,33	1/1:3,22:26:9.47:435,9,0	1/1:2,15:17:3.48:116,3,0	0/1:3,21:24:93.42:350,0,93	0/0:15,0:14:2.22:0,2,401	0/1:22,0:22:5.68:6,0,19	0/0:41,0:38:6.02:0,6,123	1/1:2,21:24:3.65:48,4,0	1/1:22,0:21:0.47:1,0,0	1/1:3,34:37:11.90:335,12,0	0/1:23,0:23:38.95:39,0,196	0/1:33,0:33:99:101,0,404	0/1:20,0:20:88.57:273,0,89	0/1:17,0:17:29.15:29,0,464
chr10	57146895	.	TCTCTCTCTCACA	T	3957.71	PASS	AB=0.960;AC=28;AF=0.500;AN=56;BaseQRankSum=8.626;DP=681;FS=21.126;HRun=0;HaplotypeScore=184.2523;InbreedingCoeff=0.1565;MQ=53.28;MQ0=20;MQRankSum=-6.805;QD=8.51;ReadPosRankSum=1.993;VQSLOD=1.1863;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:38:87.29:0,87,3157	1/1:2,0:2:3.01:34,3,0	0/0:26,0:7:20.86:0,21,453	0/0:25,0:12:32.73:0,33,806	0/0:20,0:20:45.13:0,45,1872	0/1:18,0:17:0:0,0,0	1/1:26,0:25:3.48:68,3,0	1/1:20,0:19:26.96:683,27,0	0/1:37,0:36:0.91:360,0,1	0/1:33,0:33:99:342,0,251	0/0:14,0:14:2.65:0,3,50	0/1:19,0:19:0.18:0,0,0	0/0:20,0:20:51.17:0,51,1728	0/0:30,0:30:75.24:0,75,2566	0/1:31,0:31:8:347,0,8	1/1:26,0:26:8.29:371,8,0	1/1:17,0:17:3.48:98,3,0	0/1:24,0:24:95.16:304,0,95	0/1:18,0:17:70.26:70,0,134	1/1:21,0:21:3.01:30,3,0	0/0:42,0:39:6:0,6,74	1/1:23,1:24:3.64:29,4,0	0/1:2,18:20:0:1,0,0	1/1:36,0:36:11.47:254,11,0	0/1:24,0:24:57.91:58,0,118	0/1:31,0:31:82.21:416,0,82	0/1:21,0:21:43.75:393,0,44	0/1:16,0:16:98.32:98,0,195
chr10	57146899	.	TCTCTCACACACA	T	6670.66	PASS	AB=0.940;AC=33;AF=0.611;AN=54;BaseQRankSum=9.367;DP=671;FS=0.492;HRun=0;HaplotypeScore=169.5666;InbreedingCoeff=0.4949;MQ=52.87;MQ0=22;MQRankSum=-2.497;QD=14.89;ReadPosRankSum=2.880;VQSLOD=3.7208;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:40:65.73:0,66,2692	1/1:2,0:2:3.01:72,3,0	0/0:22,0:4:9.85:0,10,120	0/0:22,0:10:23.98:0,24,381	0/0:21,0:21:42.14:0,42,1656	0/1:18,0:17:0:0,0,0	0/1:27,0:26:27.31:27,0,93	1/1:19,0:17:12.51:296,13,0	1/1:3,33:36:21.07:641,21,0	1/1:4,29:33:82.53:1445,83,0	0/1:4,10:14:0:0,0,0	0/1:19,0:19:0.06:0,0,0	0/0:20,0:20:54.12:0,54,1696	0/0:28,0:28:72.22:0,72,2128	1/1:4,26:31:14.88:489,15,0	0/1:26,0:26:38.54:194,0,39	1/1:17,0:17:3.48:62,3,0	0/1:24,0:24:83.45:112,0,83	1/1:4,11:14:30.04:475,30,0	1/1:1,19:20:3.01:33,3,0	./.	0/0:25,0:25:1.61:0,2,8	0/1:21,0:20:0:0,0,0	1/1:37,0:37:2.73:104,3,0	1/1:7,16:23:3.01:108,3,0	1/1:2,29:31:71.82:1442,72,0	1/1:2,19:21:20.68:671,21,0	1/1:11,2:13:35.53:498,36,0
chr10	57146903	.	TCACACACACA	T	2293.98	PASS	AB=0.983;AC=21;AF=0.438;AN=48;BaseQRankSum=7.452;DP=680;FS=2.137;HRun=0;HaplotypeScore=173.1387;InbreedingCoeff=0.2323;MQ=50.58;MQ0=24;MQRankSum=-3.619;QD=6.69;ReadPosRankSum=-0.091;VQSLOD=2.6067;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:40:63.50:0,64,1934	1/1:1,0:2:3.01:52,3,0	./.	./.	0/0:22,0:22:36.05:0,36,1132	0/1:18,0:17:0:0,0,0	0/0:28,0:27:2.52:0,3,124	0/0:22,0:19:9.34:0,9,60	1/1:36,1:36:21.07:445,21,0	0/1:32,1:33:5.27:367,0,5	0/1:14,0:15:0.05:0,0,0	0/0:21,0:21:2.85:0,3,82	0/0:22,0:22:39.13:0,39,1365	0/0:27,0:27:39.11:0,39,1540	1/1:30,1:31:14.84:300,15,0	0/1:27,0:27:22.29:22,0,174	1/1:18,0:18:2.21:7,2,0	0/0:24,0:24:17.31:0,17,156	0/1:16,0:14:16.08:105,0,16	./.	./.	0/0:27,0:26:2.57:0,3,53	0/1:21,0:20:0:0,0,0	0/1:38,0:37:3.34:3,0,32	1/1:21,0:21:3.01:55,3,0	0/1:29,1:31:11.09:619,0,11	1/1:21,1:22:1.33:368,1,0	0/1:13,0:13:85.93:92,0,86
chr10	57148225	.	CTGGT	C	14090.15	PASS	AB=0.766;AC=26;AF=0.464;AN=56;BaseQRankSum=24.204;DP=1115;FS=0.253;HRun=0;HaplotypeScore=215.2276;InbreedingCoeff=-0.8667;MQ=57.47;MQ0=15;MQRankSum=-15.302;QD=13.26;ReadPosRankSum=1.448;VQSLOD=4.4676;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:28,19:47:99:922,0,1755	0/0:10,1:10:30.10:0,30,822	0/1:37,5:25:99:281,0,960	0/1:26,9:24:99:337,0,1073	0/1:30,11:41:99:235,0,1907	0/1:15,17:32:99:622,0,954	0/1:24,6:30:99:209,0,1701	0/1:44,22:63:99:758,0,2963	0/1:21,23:44:99:1206,0,1435	0/1:27,9:35:99:192,0,1804	0/1:24,6:28:40.76:41,0,1758	0/1:29,17:46:99:699,0,1851	0/1:22,18:40:99:921,0,1649	0/1:29,18:47:99:739,0,2167	0/1:34,24:58:99:1110,0,2580	0/1:28,19:47:99:867,0,1690	0/1:42,20:62:99:721,0,3118	0/1:26,14:40:99:587,0,1783	0/1:24,16:38:99:715,0,1457	0/1:29,6:33:31.93:32,0,2052	0/1:30,7:37:99:303,0,2035	0/0:37,4:40:47.63:0,48,2703	0/1:20,4:23:52.95:53,0,1490	0/1:21,10:31:99:326,0,1499	0/1:23,8:28:99:154,0,1678	0/1:35,16:52:99:751,0,2304	0/1:29,26:55:99:1237,0,1969	0/1:13,2:15:71.08:71,0,1023
chr10	57148852	.	GCC	G	11746.79	PASS	AB=0.743;AC=27;AF=0.482;AN=56;BaseQRankSum=23.998;DP=1036;FS=33.939;HRun=3;HaplotypeScore=188.7140;InbreedingCoeff=-0.9310;MQ=76.98;MQ0=0;MQRankSum=-11.867;QD=11.82;ReadPosRankSum=1.914;VQSLOD=-0.2374;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:42,27:69:99:741,0,2064	0/1:10,5:15:99:184,0,534	0/1:17,12:29:99:372,0,856	0/1:21,7:28:99:270,0,754	0/1:31,16:46:99:421,0,1646	0/1:19,13:32:99:457,0,1000	0/1:24,13:37:99:486,0,1280	0/1:23,32:55:99:1286,0,1053	0/1:18,21:39:99:760,0,928	0/1:29,16:45:99:599,0,1513	0/1:22,10:31:99:280,0,1127	0/1:24,16:40:99:400,0,1254	0/1:25,9:34:99:256,0,1287	0/1:18,12:30:99:374,0,951	0/1:32,16:48:99:546,0,1713	0/1:26,12:38:99:353,0,1344	0/1:26,18:44:99:525,0,1297	0/1:18,9:27:99:338,0,852	0/1:22,10:32:99:243,0,1018	0/1:24,5:29:56.31:56,0,1310	0/0:39,3:42:99:0,117,2218	0/1:30,16:46:99:553,0,1571	0/1:24,16:40:99:510,0,1184	0/1:34,8:42:99:241,0,1844	0/1:16,9:25:99:338,0,847	0/1:22,20:42:99:792,0,1149	0/1:30,7:35:99:212,0,1514	0/1:8,4:12:99:150,0,373
chr10	57149457	.	TA	T	8403.33	PASS	AB=0.668;AC=29;AF=0.518;AN=56;BaseQRankSum=-7.382;DP=885;FS=8.693;HRun=9;HaplotypeScore=206.2868;InbreedingCoeff=-0.1274;MQ=63.89;MQ0=0;MQRankSum=8.267;QD=12.27;ReadPosRankSum=5.651;VQSLOD=2.4034;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:55:99:0,128,1395	1/1:1,8:10:6.48:197,6,0	0/0:20,0:20:53.30:0,53,510	0/0:16,0:13:28.11:0,28,273	0/0:34,1:47:66.89:0,67,999	0/1:7,18:33:42.73:372,0,43	1/1:8,16:27:7.84:389,8,0	1/1:7,32:44:25.47:788,25,0	0/1:5,19:31:23.07:432,0,23	0/1:10,23:48:99:516,0,108	0/1:9,23:39:35.03:489,0,35	0/1:10,9:21:28.55:257,0,29	0/0:23,0:27:65.83:0,66,670	0/0:24,0:32:72.45:0,72,738	0/1:13,15:35:49.14:323,0,49	1/1:7,16:24:6.66:319,7,0	0/1:7,27:38:14.26:568,0,14	0/1:8,9:18:9.46:190,0,9	1/1:13,13:26:1.46:306,1,0	0/1:13,18:33:98.69:480,0,99	1/1:6,25:31:55.10:639,55,0	0/1:7,10:28:99:190,0,104	0/1:10,19:32:54.97:276,0,55	1/1:6,17:24:25.39:388,25,0	0/1:10,13:31:73.86:266,0,74	0/1:15,19:43:96.93:405,0,97	0/1:19,24:49:99:448,0,137	0/1:6,8:20:98.16:167,0,98
chr10	57150398	.	C	CG	7812.61	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=9.545;DP=458;FS=2.863;HRun=1;HaplotypeScore=78.5570;InbreedingCoeff=0.9797;MQ=62.35;MQ0=5;MQRankSum=-3.837;QD=20.67;ReadPosRankSum=1.483;VQSLOD=5.1529;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:77.74:0,78,1007	1/1:6,0:6:12.17:81,12,0	0/0:11,0:11:30.01:0,30,331	0/0:5,0:4:12.01:0,12,136	0/0:12,0:12:36.12:0,36,461	1/1:21,0:21:50.86:445,51,0	1/1:16,1:17:27.02:263,27,0	1/1:23,0:22:59.61:474,60,0	1/1:13,0:13:33.02:300,33,0	1/1:18,1:19:34.90:393,35,0	1/1:14,0:14:33:294,33,0	1/1:20,0:21:36.02:329,36,0	0/0:11,0:11:30.06:0,30,358	0/0:11,0:11:29.41:0,29,325	1/1:20,0:20:42.02:384,42,0	1/1:13,0:12:35.79:302,36,0	1/1:32,1:31:88.10:764,88,0	1/1:25,0:25:56.83:504,57,0	1/1:16,0:15:41.98:381,42,0	1/1:23,0:23:53.83:462,54,0	1/1:19,0:19:45.02:408,45,0	1/1:8,0:8:20.99:183,21,0	1/1:16,0:16:39.01:350,39,0	1/1:15,0:15:32.11:265,32,0	1/1:16,0:14:30.84:259,31,0	1/1:17,1:18:50.95:456,51,0	1/1:17,0:17:45.02:408,45,0	1/1:4,0:4:12.01:110,12,0
chr10	57150399	.	G	GGA	16860.78	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-7.132;DP=478;FS=1.551;HRun=0;HaplotypeScore=58.4076;InbreedingCoeff=0.9839;MQ=63.40;MQ0=5;MQRankSum=-3.022;QD=42.69;ReadPosRankSum=0.026;VQSLOD=6.2147;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:30:85.42:0,85,1279	1/1:0,1:6:15:155,15,0	0/0:12,0:12:29.86:0,30,378	0/0:5,0:4:12.03:0,12,173	0/0:13,0:13:36.12:0,36,577	1/1:7,14:21:57.02:943,57,0	1/1:2,13:15:30.05:549,30,0	1/1:8,1:29:74.63:796,75,0	1/1:1,11:14:33.11:665,33,0	1/1:2,16:21:51.03:815,51,0	1/1:0,13:14:41.99:717,42,0	1/1:1,19:20:36.12:728,36,0	0/0:12,0:12:30.04:0,30,434	0/0:11,0:11:29.41:0,29,414	1/1:0,19:20:41.88:829,42,0	1/1:3,10:12:36.05:652,36,0	1/1:9,23:31:87.58:1540,88,0	1/1:0,25:28:57.18:1114,57,0	1/1:3,13:15:42.14:813,42,0	1/1:8,16:24:60.07:1028,60,0	1/1:5,13:19:45.14:853,45,0	1/1:1,8:9:21.07:416,21,0	1/1:1,19:20:45.11:860,45,0	1/1:6,8:14:39.10:661,39,0	1/1:4,9:13:36.05:614,36,0	1/1:6,14:20:54.12:984,54,0	1/1:1,17:18:45.15:905,45,0	1/1:1,3:6:12.93:225,13,0
chr10	57150495	.	CT	C	11057.05	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=7.574;DP=566;FS=6.818;HRun=8;HaplotypeScore=59.5697;InbreedingCoeff=0.9561;MQ=71.16;MQ0=0;MQRankSum=-2.105;QD=24.46;ReadPosRankSum=0.460;VQSLOD=5.5653;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:39:99:0,108,1252	1/1:0,13:13:36.06:348,36,0	0/0:7,0:7:12.03:0,12,139	0/0:9,1:10:17.68:0,18,165	0/0:23,0:23:63.18:0,63,747	1/1:2,17:19:39.06:377,39,0	1/1:2,19:21:57.09:550,57,0	1/1:7,20:27:57.04:542,57,0	1/1:0,13:13:36.06:348,36,0	1/1:3,19:22:57.08:550,57,0	1/1:0,21:21:57.08:549,57,0	1/1:0,19:19:51.08:492,51,0	0/0:17,1:18:22.17:0,22,538	0/0:17,0:17:39.12:0,39,471	1/1:4,10:14:24.03:232,24,0	1/1:1,18:19:45.07:435,45,0	1/1:2,25:27:69.11:666,69,0	1/1:4,13:17:48.03:454,48,0	1/1:1,22:23:66.08:630,66,0	1/1:1,22:23:60.09:578,60,0	1/1:2,25:27:69.11:666,69,0	1/1:0,26:26:78.13:753,78,0	1/1:4,12:16:39.06:376,39,0	1/1:3,29:32:72.11:695,72,0	1/1:1,16:17:45.07:434,45,0	1/1:6,21:27:63.05:599,63,0	1/1:0,27:27:78.13:753,78,0	1/1:1,1:2:3:29,3,0
chr10	57150690	.	TAA	T	21318.47	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=15.415;DP=624;FS=0.713;HRun=2;HaplotypeScore=120.1902;InbreedingCoeff=0.9995;MQ=75.20;MQ0=0;MQRankSum=-5.867;QD=44.69;ReadPosRankSum=2.843;VQSLOD=4.8377;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,108,2182	1/1:0,10:10:27.09:440,27,0	0/0:17,0:16:48.16:0,48,901	0/0:27,0:27:81.28:0,81,1579	0/0:26,0:26:78.27:0,78,1556	1/1:0,20:20:54.18:880,54,0	1/1:0,16:16:45.15:734,45,0	1/1:0,23:23:66.20:1029,66,0	1/1:0,31:31:87.30:1415,87,0	1/1:0,23:23:66.20:1027,66,0	1/1:0,24:24:69.24:1122,69,0	1/1:0,20:20:60.20:978,60,0	0/0:15,0:15:45.14:0,45,876	0/0:25,0:25:75.26:0,75,1505	1/1:0,29:29:78.27:1272,78,0	1/1:0,26:26:66.23:1076,66,0	1/1:0,30:30:81.28:1320,81,0	1/1:0,10:10:27.09:440,27,0	1/1:0,18:18:54.13:787,54,0	1/1:0,25:25:57.19:929,57,0	1/1:0,25:24:63.22:1027,63,0	1/1:0,20:20:54.18:880,54,0	1/1:0,23:23:66.23:1076,66,0	1/1:0,21:21:60.20:978,60,0	1/1:0,20:20:54.18:880,54,0	1/1:0,33:33:99:1611,99,0	1/1:0,20:20:57.19:928,57,0	1/1:0,10:10:30.10:489,30,0
chr10	57151134	.	C	CCTGGGGCA	25633.93	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-9.821;DP=448;FS=1.488;HRun=0;HaplotypeScore=103.5496;InbreedingCoeff=0.9738;MQ=88.08;MQ0=0;MQRankSum=-13.160;QD=76.98;ReadPosRankSum=2.992;VQSLOD=4.7634;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:51.16:0,51,1302	1/1:3,9:12:30.10:1207,30,0	0/0:18,0:18:36.08:0,36,757	0/0:26,0:26:56.93:0,57,1194	0/0:22,0:22:60.20:0,60,1557	1/1:6,9:15:27.09:1096,27,0	1/1:8,12:22:41.40:1583,41,0	1/1:16,8:25:54.18:2015,54,0	1/1:4,13:17:39.13:1664,39,0	1/1:7,10:17:36.11:1393,36,0	1/1:6,6:12:18.06:712,18,0	1/1:5,7:12:27.09:1149,27,0	0/0:19,0:19:51.16:0,51,1282	0/0:10,0:10:30.09:0,30,749	1/1:3,12:15:39.13:1499,39,0	1/1:3,10:13:33.11:1403,33,0	1/1:5,8:13:27.09:1154,27,0	1/1:4,6:10:21.07:877,21,0	1/1:10,7:17:27.08:1049,27,0	1/1:8,8:17:33.11:1133,33,0	1/1:4,4:9:9.03:307,9,0	1/1:7,6:15:21.07:830,21,0	1/1:8,8:17:21.07:882,21,0	1/1:7,8:16:18.06:695,18,0	1/1:6,5:11:18.06:767,18,0	1/1:7,12:20:42.14:1691,42,0	1/1:7,15:22:48.16:2050,48,0	1/1:3,3:6:12.04:478,12,0
chr10	57151142	.	A	ACTGGGGCC	24856.59	PASS	AB=0.981;AC=40;AF=0.714;AN=56;BaseQRankSum=-4.823;DP=402;FS=1.852;HRun=0;HaplotypeScore=113.8082;InbreedingCoeff=0.6322;MQ=85.30;MQ0=0;MQRankSum=-14.657;QD=83.69;ReadPosRankSum=4.916;VQSLOD=5.4396;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:51.16:0,51,1385	1/1:12,0:12:36.12:1251,36,0	0/0:15,0:15:41.99:0,42,893	0/0:23,0:23:59.51:0,60,1341	0/0:21,0:21:60.20:0,60,1649	1/1:10,0:10:30.10:1038,30,0	1/1:19,0:19:30.07:1540,30,0	0/1:23,0:23:15.79:1733,0,16	1/1:15,1:16:39.13:1453,39,0	1/1:14,0:14:39.13:1371,39,0	1/1:11,0:11:18.06:608,18,0	1/1:9,1:10:30.10:1118,30,0	0/0:19,0:19:57.07:0,57,1450	0/0:10,0:10:30.10:0,30,821	1/1:14,0:14:39.13:1287,39,0	1/1:11,1:12:36.12:1339,36,0	1/1:13,0:13:9.11:973,9,0	1/1:10,0:10:24.08:854,24,0	0/1:20,0:20:40.73:1441,0,41	1/1:14,0:14:11.12:1187,11,0	0/1:6,0:6:27.95:290,0,28	1/1:14,0:14:30.10:1032,30,0	1/1:17,0:17:19.12:1078,19,0	0/1:11,1:12:0.93:578,0,1	1/1:8,1:9:1.08:762,1,0	1/1:16,0:16:45.11:1535,45,0	1/1:21,0:21:39.20:1969,39,0	1/1:4,0:4:12.04:421,12,0
chr10	57151181	.	C	CT	411.57	PASS	AB=0.915;AC=18;AF=0.321;AN=56;BaseQRankSum=-4.582;DP=442;FS=0.644;HRun=16;HaplotypeScore=95.7742;InbreedingCoeff=-0.1124;MQ=69.01;MQ0=2;MQRankSum=1.494;QD=1.63;ReadPosRankSum=-2.295;VQSLOD=-0.6933;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:13:18.48:0,18,95	1/1:3,2:6:5.21:64,5,0	0/1:21,0:14:6.53:22,0,7	0/0:18,0:9:3.63:0,4,11	0/1:17,5:23:69.72:70,0,98	0/1:13,2:16:16.54:17,0,108	0/0:16,0:19:15.39:0,15,78	1/1:20,6:27:12.72:179,13,0	0/0:9,0:10:10.68:0,11,56	0/0:14,1:16:11.99:0,12,136	0/1:21,1:24:15.38:15,0,97	0/1:10,1:11:12.42:12,0,38	0/0:17,1:18:2.08:0,2,105	0/1:12,0:13:0.79:15,0,1	0/1:11,1:12:6.57:7,0,66	0/1:13,0:13:10.71:11,0,38	0/1:14,1:16:4.38:4,0,70	0/0:11,1:13:16.28:0,16,85	0/0:16,0:16:11.40:0,11,66	0/1:13,1:14:1.60:2,0,83	0/0:6,0:6:3.73:0,4,18	0/1:11,1:12:7.88:8,0,55	0/1:14,4:22:54.78:60,0,55	0/0:12,0:13:13.17:0,13,72	0/1:12,1:14:23.30:23,0,67	0/0:22,0:23:24.47:0,24,138	0/0:24,0:25:7.80:0,8,119	0/1:4,3:8:19.04:56,0,19
chr10	57151409	.	TGG	T	11228.26	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=11.615;DP=415;FS=8.830;HRun=6;HaplotypeScore=135.9015;InbreedingCoeff=0.9869;MQ=68.36;MQ0=2;MQRankSum=-7.147;QD=35.42;ReadPosRankSum=0.353;VQSLOD=3.3843;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:66.18:0,66,1131	1/1:0,7:7:21.07:273,21,0	0/0:22,0:17:38.56:0,39,605	0/0:10,0:6:11.40:0,11,138	0/0:25,0:25:69.24:0,69,1223	1/1:1,15:17:48.07:614,48,0	1/1:1,12:13:39.09:485,39,0	1/1:3,18:24:59.84:705,60,0	1/1:0,8:8:24.08:314,24,0	1/1:3,14:17:45.12:569,45,0	1/1:0,22:22:63.20:802,63,0	1/1:1,7:9:24.02:277,24,0	0/0:11,0:11:30.57:0,31,533	0/0:8,0:8:24.07:0,24,396	1/1:0,16:16:48.16:633,48,0	1/1:2,8:10:24.08:314,24,0	1/1:4,13:17:39.13:512,39,0	1/1:0,25:26:75.16:968,75,0	1/1:1,12:14:38.99:487,39,0	1/1:0,21:21:63.20:816,63,0	1/1:1,9:10:27.09:349,27,0	1/1:2,6:8:18.01:231,18,0	1/1:3,15:18:48.11:616,48,0	1/1:0,7:7:21.07:274,21,0	1/1:0,7:8:24.04:292,24,0	1/1:2,17:19:54.12:692,54,0	1/1:1,16:17:51.16:651,51,0	1/1:0,9:9:27.09:353,27,0
chr10	57151417	.	C	CT	7984.77	PASS	AB=0.575;AC=41;AF=0.732;AN=56;BaseQRankSum=10.470;DP=434;FS=15.951;HRun=9;HaplotypeScore=143.9342;InbreedingCoeff=0.7265;MQ=71.43;MQ0=2;MQRankSum=-5.288;QD=23.98;ReadPosRankSum=0.964;VQSLOD=3.5079;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:53.99:0,54,468	1/1:0,8:8:24.06:259,24,0	0/0:25,0:20:18.33:0,18,166	0/0:10,0:7:4.04:0,4,49	0/0:24,0:24:59.95:0,60,517	1/1:2,15:17:45.12:495,45,0	1/1:3,11:14:30.07:316,30,0	1/1:11,11:22:10.13:334,10,0	1/1:0,9:9:27.07:295,27,0	1/1:7,9:16:29.97:302,30,0	1/1:6,19:25:41.27:547,41,0	1/1:0,9:9:27.03:277,27,0	0/0:12,0:12:26.99:0,27,234	0/0:10,0:10:29.99:0,30,260	1/1:4,14:18:19.09:434,19,0	0/1:3,5:8:7.98:143,0,8	1/1:2,12:14:35.99:378,36,0	1/1:4,23:27:69.18:756,69,0	1/1:3,12:15:36.10:396,36,0	1/1:1,25:26:69.14:734,69,0	1/1:3,7:10:24.05:253,24,0	1/1:1,8:9:24.02:244,24,0	1/1:5,13:18:39.10:419,39,0	0/1:1,6:7:7.48:146,0,7	0/1:2,6:8:4.89:173,0,5	1/1:5,13:18:18.86:407,19,0	1/1:7,16:23:19.16:416,19,0	1/1:4,8:12:24.06:260,24,0
chr10	57151498	.	C	CT	12762.73	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-7.346;DP=487;FS=4.521;HRun=6;HaplotypeScore=54.3846;InbreedingCoeff=0.9951;MQ=78.11;MQ0=0;MQRankSum=-3.570;QD=33.06;ReadPosRankSum=0.970;VQSLOD=5.0833;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:63.10:0,63,626	1/1:1,7:8:21.07:264,21,0	0/0:15,0:15:31.59:0,32,301	0/0:11,0:11:23.98:0,24,222	0/0:28,0:28:84.15:0,84,842	1/1:3,17:20:51.16:641,51,0	1/1:2,15:17:42.09:510,42,0	1/1:4,30:34:93.27:1143,93,0	1/1:2,11:13:33.11:415,33,0	1/1:2,20:22:66.21:824,66,0	1/1:3,24:27:72.19:887,72,0	1/1:1,8:9:24.08:302,24,0	0/0:13,0:13:36.08:0,36,367	0/0:13,0:13:39.09:0,39,397	1/1:1,12:13:30.10:377,30,0	1/1:0,11:11:33.11:415,33,0	1/1:1,13:14:36.12:453,36,0	1/1:1,20:21:57.18:717,57,0	1/1:3,17:20:51.16:630,51,0	1/1:2,18:20:57.17:702,57,0	1/1:0,14:14:39.12:491,39,0	1/1:1,19:20:57.18:717,57,0	1/1:0,15:15:42.13:525,42,0	1/1:1,6:7:18.06:226,18,0	1/1:2,8:10:21.07:264,21,0	1/1:3,21:24:38.59:778,39,0	1/1:2,35:37:69.92:1178,70,0	1/1:2,8:10:24.08:302,24,0
chr10	57152692	.	ATGG	A	1471.19	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=4.649;DP=529;FS=5.075;HRun=0;HaplotypeScore=145.9716;InbreedingCoeff=0.9967;MQ=70.30;MQ0=1;MQRankSum=-6.483;QD=36.78;ReadPosRankSum=-4.235;VQSLOD=3.2557;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:90.31:0,90,2071	1/1:1,6:7:20.92:230,21,0	0/0:10,0:10:30.06:0,30,572	0/0:18,0:16:45.15:0,45,935	0/0:27,0:27:81.28:0,81,1887	0/0:21,0:21:60.21:0,60,1399	0/0:14,0:14:42.13:0,42,939	1/1:6,27:33:95.56:1362,96,0	0/0:21,0:20:60.21:0,60,1399	0/0:30,0:30:90.31:0,90,2101	0/0:27,0:27:81.26:0,81,1845	0/0:16,0:16:48.16:0,48,1115	0/0:17,0:17:51.18:0,51,1178	0/0:17,0:17:51.18:0,51,1206	0/0:14,0:14:39.13:0,39,922	0/0:12,0:11:33.11:0,33,774	0/0:20,0:20:60.19:0,60,1356	0/0:11,0:11:33.11:0,33,752	0/0:20,0:20:57.20:0,57,1335	0/0:26,0:26:78.27:0,78,1843	0/0:14,0:14:39.13:0,39,913	0/0:12,0:12:33.11:0,33,774	0/0:17,0:17:48.16:0,48,1122	0/0:11,0:11:33.11:0,33,746	0/0:19,0:19:54.19:0,54,1255	0/0:22,0:22:66.23:0,66,1499	0/0:32,0:32:96.29:0,96,2186	0/0:10,0:10:30.10:0,30,681
chr10	57152693	.	TG	T	729.52	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.646;DP=534;FS=6.505;HRun=2;HaplotypeScore=128.1315;InbreedingCoeff=0.9943;MQ=70.21;MQ0=1;MQRankSum=-7.292;QD=18.24;ReadPosRankSum=-3.609;VQSLOD=2.3614;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:90.26:0,90,1319	1/1:7,0:7:17.62:130,18,0	0/0:10,0:10:29.72:0,30,357	0/0:18,0:16:45.11:0,45,624	0/0:27,0:27:81.26:0,81,1193	0/0:21,0:21:60.20:0,60,898	0/0:14,0:14:39.13:0,39,584	1/1:27,6:33:88.68:719,89,0	0/0:21,0:20:60.20:0,60,893	0/0:30,0:30:90.30:0,90,1344	0/0:27,0:27:78.25:0,78,1149	0/0:16,0:16:48.16:0,48,717	0/0:18,0:18:54.17:0,54,784	0/0:17,0:17:51.17:0,51,764	0/0:15,0:15:42.13:0,42,609	0/0:12,0:11:33.11:0,33,493	0/0:20,0:20:57.19:0,57,852	0/0:11,0:11:33.07:0,33,470	0/0:21,0:21:63.19:0,63,906	0/0:26,0:26:78.26:0,78,1169	0/0:14,0:14:39.13:0,39,584	0/0:12,0:12:33.11:0,33,494	0/0:17,0:17:48.16:0,48,719	0/0:12,0:12:36.06:0,36,489	0/0:19,0:19:54.18:0,54,806	0/0:23,0:23:66.21:0,66,958	0/0:32,0:32:93.30:0,93,1371	0/0:10,0:10:30.10:0,30,448
chr10	57152700	.	TATTTCTAAA	T	1794.37	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.110;DP=515;FS=4.027;HRun=0;HaplotypeScore=211.6485;InbreedingCoeff=0.9914;MQ=69.57;MQ0=1;MQRankSum=-8.112;QD=52.78;ReadPosRankSum=-2.224;VQSLOD=3.0377;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:96.33:0,96,4637	1/1:0,6:6:18.06:459,18,0	0/0:8,0:8:21.06:0,21,786	0/0:18,0:16:48.16:0,48,2022	0/0:28,0:28:84.26:0,84,3874	0/0:21,0:21:63.22:0,63,2362	0/0:14,0:14:39.10:0,39,1313	1/1:15,13:28:54.16:1455,54,0	0/0:20,0:19:57.17:0,57,1337	0/0:32,0:32:96.33:0,96,2386	0/0:24,0:24:72.25:0,72,1770	0/0:17,0:17:51.17:0,51,1961	0/0:17,0:17:48.16:0,48,2252	0/0:17,0:17:48.16:0,48,2344	0/0:16,0:16:45.15:0,45,1109	0/0:10,0:9:27.07:0,27,838	0/0:17,0:17:51.13:0,51,1912	0/0:12,0:12:36.09:0,36,1367	0/0:21,0:21:63.21:0,63,1496	0/0:28,0:28:84.01:0,84,2012	0/0:14,0:14:39.13:0,39,975	0/0:12,0:12:33.11:0,33,1363	0/0:17,0:17:48.16:0,48,1790	0/0:9,0:9:27.09:0,27,1117	0/0:20,0:20:54.19:0,54,1361	0/0:18,0:18:54.18:0,54,1225	0/0:31,0:31:90.04:0,90,2165	0/0:8,0:8:24.08:0,24,632
chr10	57152702	.	TTTCTAAA	T	1749.61	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.879;DP=504;FS=6.368;HRun=0;HaplotypeScore=186.9245;InbreedingCoeff=0.9913;MQ=70.02;MQ0=1;MQRankSum=-7.310;QD=69.98;ReadPosRankSum=-3.245;VQSLOD=2.4692;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:99:0,99,4070	1/1:6,0:6:18.06:451,18,0	0/0:8,0:8:21.07:0,21,667	0/0:18,0:16:48.16:0,48,1730	0/0:28,0:28:84.28:0,84,3316	0/0:21,0:21:63.22:0,63,1958	0/0:12,0:12:36.11:0,36,1067	1/1:13,6:19:54.19:1418,54,0	0/0:21,0:20:56.27:0,56,961	0/0:32,0:32:96.33:0,96,1694	0/0:24,0:24:72.25:0,72,1286	0/0:17,0:17:51.17:0,51,1614	0/0:16,0:16:48.16:0,48,1924	0/0:16,0:16:48.16:0,48,1988	0/0:16,0:16:45.15:0,45,801	0/0:10,0:9:27.08:0,27,706	0/0:16,0:16:48.15:0,48,1547	0/0:12,0:12:36.09:0,36,1114	0/0:21,0:21:63.18:0,63,1099	0/0:28,0:28:75.08:0,75,1415	0/0:14,0:14:39.13:0,39,694	0/0:12,0:12:33.11:0,33,1111	0/0:18,0:18:51.17:0,51,1553	0/0:9,0:9:27.09:0,27,911	0/0:20,0:20:52.01:0,52,958	0/0:19,0:19:48.89:0,49,899	0/0:30,0:30:88.85:0,89,1581	0/0:8,0:8:24.08:0,24,458
chr10	57152706	.	TA	T	7633.48	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=12.973;DP=505;FS=0.337;HRun=5;HaplotypeScore=105.4621;InbreedingCoeff=0.9960;MQ=70.01;MQ0=2;MQRankSum=-2.978;QD=28.59;ReadPosRankSum=-0.686;VQSLOD=3.9554;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:99:0,99,1353	1/1:6,0:6:15.77:81,16,0	0/0:7,0:7:18:0,18,217	0/0:17,0:15:24.39:0,24,545	0/0:27,0:27:78.26:0,78,1066	0/0:21,0:21:57.19:0,57,779	0/0:10,0:10:30.10:0,30,410	1/1:22,0:22:52.97:266,53,0	1/1:0,19:19:54.15:612,54,0	1/1:2,32:34:96.20:1064,96,0	1/1:3,24:27:60.17:680,60,0	0/0:16,0:16:48.16:0,48,655	0/0:16,0:16:48.16:0,48,656	0/0:16,0:16:45.15:0,45,615	1/1:1,15:16:42.12:476,42,0	0/0:9,0:8:24.07:0,24,308	0/0:16,0:16:48.14:0,48,639	0/0:11,0:11:33.09:0,33,433	1/1:2,20:21:60.12:657,60,0	1/1:0,30:30:81.23:916,81,0	1/1:0,15:15:39.11:442,39,0	0/0:13,0:13:36.12:0,36,490	0/0:16,0:16:45.15:0,45,615	0/0:10,0:10:30.10:0,30,408	1/1:0,20:20:57.16:645,57,0	1/1:1,17:18:51.13:569,51,0	1/1:1,27:29:84.24:952,84,0	1/1:0,9:9:24.07:272,24,0
chr10	57153273	.	G	GAA	19947.65	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=14.553;DP=719;FS=8.943;HRun=1;HaplotypeScore=172.7518;InbreedingCoeff=0.9997;MQ=87.87;MQ0=0;MQRankSum=-9.174;QD=37.01;ReadPosRankSum=1.048;VQSLOD=4.2239;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,135,2173	1/1:1,9:10:29.89:435,30,0	0/0:28,0:28:75.50:0,76,1048	0/0:32,0:32:65.10:0,65,1013	0/0:22,0:22:63.16:0,63,1023	1/1:4,26:29:86.35:1117,86,0	1/1:6,10:16:48:576,48,0	1/1:11,14:25:51.12:711,51,0	1/1:6,28:34:95.65:1343,96,0	1/1:11,15:26:73.90:949,74,0	1/1:4,8:12:27.05:410,27,0	1/1:4,21:26:74.91:1028,75,0	0/0:31,0:31:93.26:0,93,1439	0/0:21,0:21:63.20:0,63,998	1/1:7,21:28:77.31:1107,77,0	1/1:5,22:26:74.96:1114,75,0	1/1:4,26:30:88.22:1259,88,0	1/1:3,18:21:59.87:872,60,0	1/1:5,17:22:65.56:916,66,0	1/1:4,19:22:62.24:794,62,0	1/1:8,19:27:65.05:751,65,0	1/1:6,24:30:81:1070,81,0	1/1:13,14:27:59.60:674,60,0	1/1:3,29:32:83.96:1331,84,0	1/1:4,20:23:65.67:919,66,0	1/1:10,16:24:63.11:869,63,0	1/1:5,17:22:59.98:785,60,0	1/1:2,19:21:63.17:919,63,0
chr10	57153274	.	GAGA	G	677.04	PASS	AB=0.967;AC=13;AF=0.232;AN=56;BaseQRankSum=-6.412;DP=719;FS=1.036;HRun=0;HaplotypeScore=243.8091;InbreedingCoeff=-0.3089;MQ=88.08;MQ0=0;MQRankSum=-1.959;QD=2.14;ReadPosRankSum=-10.968;VQSLOD=-0.1201;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,135,3323	0/1:10,0:10:5.05:5,0,82	0/0:28,0:28:72.91:0,73,1665	0/0:31,0:32:83.47:0,83,1687	0/0:22,0:22:63.22:0,63,1536	0/1:29,0:28:88.78:89,0,255	0/1:15,0:15:90.93:91,0,166	0/1:16,9:25:99:124,0,194	0/1:35,0:35:21.43:21,0,310	0/1:27,0:27:99:153,0,289	0/0:10,2:12:22.35:0,22,132	0/1:25,0:25:7.37:7,0,300	0/0:31,0:31:93.31:0,93,2208	0/0:21,0:21:63.20:0,63,1495	0/0:28,0:28:9:0,9,257	0/1:28,0:27:36.17:36,0,260	0/0:31,0:31:0.19:0,0,255	0/0:21,0:21:13.20:0,13,248	0/1:23,0:23:66.77:67,0,298	0/1:23,0:22:89.90:90,0,181	0/1:27,0:27:99:123,0,108	0/0:27,3:30:66.78:0,67,357	0/1:21,5:26:1.30:1,0,206	0/0:33,0:33:61.69:0,62,297	0/1:24,0:23:12.03:12,0,199	0/0:23,2:23:0.87:0,1,328	0/0:23,0:23:44.22:0,44,208	0/0:19,0:19:52.82:0,53,253
chr10	57153277	.	A	AGG	19371.93	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=13.553;DP=696;FS=10.657;HRun=1;HaplotypeScore=165.0331;InbreedingCoeff=0.9994;MQ=88.51;MQ0=0;MQRankSum=-11.186;QD=37.62;ReadPosRankSum=3.827;VQSLOD=4.0488;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,141,2247	1/1:1,9:10:30.10:480,30,0	0/0:27,0:27:78.41:0,78,1140	0/0:31,0:32:77.52:0,78,1058	0/0:23,0:23:62.95:0,63,989	1/1:0,29:28:72.24:1117,72,0	1/1:4,10:14:35.37:432,35,0	1/1:9,14:23:66.07:797,66,0	1/1:6,28:34:92.95:1372,93,0	1/1:2,22:25:68.97:1073,69,0	1/1:4,8:12:24.05:330,24,0	1/1:2,22:25:63.19:957,63,0	0/0:30,0:30:90.29:0,90,1435	0/0:20,0:20:60.18:0,60,928	1/1:5,21:26:72.18:1083,72,0	1/1:5,22:26:81.19:1178,81,0	1/1:5,25:31:87.25:1320,87,0	1/1:1,17:19:51.11:812,51,0	1/1:10,9:19:53.33:622,53,0	1/1:2,18:20:57.18:849,57,0	1/1:7,19:26:59.78:889,60,0	1/1:5,23:29:63.21:942,63,0	1/1:7,13:21:32.99:520,33,0	1/1:1,33:36:83.40:1329,83,0	1/1:2,19:21:60.16:905,60,0	1/1:4,16:18:54.06:734,54,0	1/1:1,16:23:45.15:683,45,0	1/1:4,19:23:66.20:947,66,0
chr10	57153525	.	T	TCATACATACATA	15809.78	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=2.390;DP=742;FS=0.536;HRun=0;HaplotypeScore=237.8261;InbreedingCoeff=0.7865;MQ=49.58;MQ0=5;MQRankSum=-6.597;QD=26.09;ReadPosRankSum=-1.354;VQSLOD=3.6171;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:35:39.10:0,39,1078	1/1:6,0:11:1.05:32,1,0	0/0:23,0:11:6.01:0,6,99	0/0:20,0:15:6.46:0,6,57	0/0:20,0:20:42.12:0,42,1180	1/1:12,0:25:24.08:660,24,0	1/1:12,0:28:12.04:260,12,0	1/1:48,0:48:34.42:303,34,0	1/1:17,14:37:21.07:1014,21,0	1/1:6,23:32:59.62:1877,60,0	1/1:14,4:24:3.97:347,4,0	1/1:19,0:25:32.98:706,33,0	0/0:19,0:19:42.14:0,42,1162	0/0:18,0:18:36.07:0,36,926	1/1:13,11:28:9.99:697,10,0	1/1:13,0:39:54.14:1391,54,0	1/1:12,0:15:12.04:285,12,0	1/1:4,0:9:3.01:77,3,0	1/1:17,6:27:42.02:1274,42,0	1/1:11,9:27:10.96:772,11,0	1/1:28,0:28:12.96:421,13,0	1/1:23,0:30:27.64:587,28,0	1/1:9,0:20:9.03:196,9,0	1/1:18,0:27:6.49:146,6,0	1/1:15,22:45:14.60:1046,15,0	1/1:9,15:28:41.12:1265,41,0	1/1:13,12:29:12.04:701,12,0	1/1:5,15:20:30.10:1754,30,0
chr10	57153554	.	C	CAT	1859.76	PASS	AB=0.978;AC=27;AF=0.482;AN=56;BaseQRankSum=6.334;DP=697;FS=1.924;HRun=0;HaplotypeScore=236.0517;InbreedingCoeff=-0.1018;MQ=38.58;MQ0=16;MQRankSum=-5.831;QD=3.92;ReadPosRankSum=0.581;VQSLOD=2.6694;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:32:51.14:0,51,725	1/1:8,0:8:3.48:25,3,0	0/0:52,0:9:6.86:0,7,186	0/0:57,0:7:15.01:0,15,184	0/0:20,0:20:45.08:0,45,582	1/1:17,0:16:20.90:122,21,0	0/1:16,0:16:4.21:4,0,80	0/1:25,14:38:99:276,0,768	0/1:28,0:28:76.39:88,0,76	0/1:29,0:30:99:187,0,449	0/1:13,0:13:34.02:36,0,34	0/1:25,0:26:45.97:192,0,46	0/0:19,0:18:45.15:0,45,683	0/0:21,0:20:42.04:0,42,525	0/1:22,0:22:29.53:66,0,30	0/1:37,0:37:99:154,0,145	0/0:20,0:20:7.71:0,8,402	0/1:5,0:5:11.26:11,0,29	0/1:24,0:21:80.79:81,0,267	1/1:21,0:21:13.82:92,14,0	0/1:25,0:25:51.04:51,0,105	1/1:26,0:26:6.21:191,6,0	0/1:17,0:17:7.51:8,0,125	0/1:18,0:18:11.55:12,0,36	1/1:31,0:30:15.33:110,15,0	0/1:30,0:27:99:106,0,248	0/1:26,0:26:48.55:49,0,243	1/1:16,0:16:29.39:177,29,0
chr10	57153567	.	ACGTGTGTGTG	A	2928.92	PASS	AB=0.877;AC=38;AF=0.679;AN=56;BaseQRankSum=8.180;DP=580;FS=6.233;HRun=0;HaplotypeScore=237.9041;InbreedingCoeff=0.5675;MQ=36.72;MQ0=19;MQRankSum=-4.296;QD=7.41;ReadPosRankSum=-1.995;VQSLOD=1.5544;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:35.82:0,36,668	0/0:4,0:4:5.68:0,6,217	0/0:48,0:5:12.90:0,13,63	0/0:51,0:3:4.66:0,5,19	0/0:16,0:16:29.56:0,30,326	1/1:12,0:13:3.35:16,3,0	1/1:12,0:14:3.62:11,4,0	0/1:27,0:26:13.01:13,0,14	1/1:14,7:22:18.89:316,19,0	1/1:22,6:29:32.32:655,32,0	0/1:11,2:13:0.22:0,0,7	1/1:10,0:18:18.01:324,18,0	0/0:20,0:19:39.16:0,39,1024	0/0:19,0:18:29.21:0,29,651	1/1:12,7:19:9.79:56,10,0	1/1:22,0:30:4.78:75,5,0	1/1:13,0:17:6.02:221,6,0	1/1:3,0:4:2.20:69,2,0	1/1:14,1:14:7.54:114,8,0	1/1:16,3:19:2.02:6,2,0	1/1:19,2:21:7.76:37,8,0	0/1:8,0:18:2.62:3,0,9	1/1:13,0:14:1.41:3,1,0	1/1:17,0:19:1.72:4,2,0	1/1:16,5:22:15.14:88,15,0	1/1:20,4:22:11.53:537,12,0	1/1:13,7:22:21.97:554,22,0	0/1:11,0:11:0:1,0,0
chr10	57154118	.	GT	G	1431.84	PASS	AB=0.918;AC=30;AF=0.536;AN=56;BaseQRankSum=8.536;DP=576;FS=0.786;HRun=3;HaplotypeScore=229.5564;InbreedingCoeff=0.1562;MQ=42.74;MQ0=17;MQRankSum=-7.234;QD=3.83;ReadPosRankSum=8.933;VQSLOD=-0.6926;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,99,1342	1/1:7,0:7:4.55:24,5,0	0/0:52,0:12:29.96:0,30,329	0/0:43,0:14:15.33:0,15,159	0/0:27,0:26:69:0,69,936	1/1:7,8:15:8.24:125,8,0	1/1:12,6:17:7.97:91,8,0	0/1:24,0:22:10.69:11,0,104	1/1:13,0:12:9.78:77,10,0	0/1:17,0:20:38.36:47,0,38	0/1:11,0:11:13.73:29,0,14	0/1:15,7:22:10.70:104,0,11	0/0:16,0:16:30.08:0,30,389	0/0:14,0:14:42.07:0,42,558	1/1:15,0:20:13.96:110,14,0	1/1:11,11:21:33.56:185,34,0	0/1:19,11:27:5.98:159,0,6	1/1:11,8:19:20.24:213,20,0	0/1:20,0:18:15.72:77,0,16	0/1:9,0:14:0.65:1,0,36	0/0:5,0:12:6.55:0,7,24	0/1:11,9:20:24.33:105,0,24	1/1:8,8:16:9.92:81,10,0	0/1:12,3:15:17.65:18,0,36	0/1:9,0:15:4.66:5,0,66	0/1:13,0:21:12.54:51,0,13	0/1:26,0:26:48.42:48,0,87	1/1:6,0:6:13.59:57,14,0
chr10	57154120	.	TTGGG	T	9190.99	PASS	AB=0.818;AC=39;AF=0.696;AN=56;BaseQRankSum=10.564;DP=545;FS=4.151;HRun=0;HaplotypeScore=216.5335;InbreedingCoeff=0.6440;MQ=44.02;MQ0=18;MQRankSum=-11.279;QD=26.19;ReadPosRankSum=4.616;VQSLOD=4.1324;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,106,2843	1/1:1,0:7:18.82:128,19,0	0/0:55,0:13:32.44:0,32,714	0/0:41,0:13:19.65:0,20,351	0/0:28,0:27:76.51:0,77,1972	0/1:10,0:11:1.59:72,0,2	1/1:9,0:16:36.71:374,37,0	0/1:15,3:21:1.92:446,0,2	1/1:1,11:11:30.10:572,30,0	1/1:7,10:17:47.29:755,47,0	1/1:1,9:11:30.09:512,30,0	1/1:12,0:20:21.57:326,22,0	0/0:18,0:18:36.12:0,36,902	0/0:15,0:15:42.14:0,42,1166	1/1:5,13:18:51.16:930,51,0	1/1:13,0:19:29.49:227,29,0	1/1:16,0:25:43.65:408,44,0	1/1:8,1:17:41.79:249,42,0	0/1:4,12:16:16.63:610,0,17	1/1:9,5:14:27.07:360,27,0	0/1:8,0:8:6.30:30,0,6	1/1:13,0:19:33.06:244,33,0	1/1:9,1:14:31.28:327,31,0	1/1:7,2:13:13.60:254,14,0	0/1:11,1:13:16.84:127,0,17	1/1:11,9:20:42.12:691,42,0	1/1:7,18:26:78.21:1238,78,0	1/1:0,5:5:15.05:312,15,0
chr10	57154121	.	T	TTGG	8169.09	PASS	AB=0.873;AC=35;AF=0.625;AN=56;BaseQRankSum=5.425;DP=530;FS=1.231;HRun=0;HaplotypeScore=214.2893;InbreedingCoeff=0.2608;MQ=44.31;MQ0=18;MQRankSum=-10.945;QD=24.39;ReadPosRankSum=2.853;VQSLOD=4.5665;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,105,1774	0/1:6,1:7:95.85:96,0,99	0/0:56,0:13:27.04:0,27,412	0/0:39,0:13:1.74:0,2,184	0/0:28,0:27:72.24:0,72,1291	0/1:9,2:11:15.60:102,0,16	1/1:14,2:15:11.28:375,11,0	0/1:12,9:20:36.48:757,0,36	1/1:11,1:11:19.36:264,19,0	1/1:11,4:15:45.09:637,45,0	1/1:9,1:11:30.06:398,30,0	0/1:16,4:20:60.33:297,0,60	0/0:17,0:18:35.96:0,36,527	0/0:15,0:15:42.14:0,42,764	1/1:15,2:17:51.06:588,51,0	0/1:18,2:19:30.93:31,0,147	0/1:26,2:25:27.46:327,0,27	0/1:17,0:17:65.83:85,0,66	1/1:16,2:16:12.95:421,13,0	1/1:8,3:11:27.08:405,27,0	1/1:4,2:6:12.04:255,12,0	0/1:16,4:20:62.33:249,0,62	0/1:14,1:15:15.71:250,0,16	1/1:9,4:13:25.09:407,25,0	1/1:4,5:9:14.58:406,15,0	1/1:14,2:16:39.08:545,39,0	1/1:19,7:26:78.18:1162,78,0	1/1:5,0:5:9.42:114,9,0
chr10	57154123	.	G	GTT	2420.88	PASS	AB=0.826;AC=16;AF=0.286;AN=56;BaseQRankSum=2.369;DP=528;FS=1.403;HRun=0;HaplotypeScore=227.1225;InbreedingCoeff=0.4722;MQ=44.48;MQ0=18;MQRankSum=-6.970;QD=14.07;ReadPosRankSum=0.193;VQSLOD=3.0320;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,105,1670	0/1:7,0:7:1.05:9,0,1	0/0:54,0:13:32.64:0,33,450	0/0:39,0:12:19.84:0,20,238	0/0:29,0:28:72.94:0,73,1171	1/1:3,8:11:9.67:308,10,0	1/1:10,6:15:12.80:224,13,0	0/0:22,0:20:2.51:0,3,106	0/0:12,0:11:6.93:0,7,81	0/0:15,0:15:19.24:0,19,189	0/0:11,0:11:13:0,13,93	0/1:13,7:20:19.84:253,0,20	0/0:19,0:19:32.87:0,33,490	0/0:15,0:15:42.14:0,42,684	0/0:17,0:17:14.14:0,14,144	1/1:9,11:19:28.76:427,29,0	0/1:16,11:24:21.17:319,0,21	1/1:9,8:17:32.29:401,32,0	0/0:18,0:16:26.94:0,27,168	0/0:11,0:11:11.03:0,11,66	0/1:6,0:6:1.24:1,0,4	0/1:11,9:20:33.29:323,0,33	1/1:7,8:15:17.58:267,18,0	0/1:10,3:13:22.32:66,0,22	0/0:9,0:9:4.07:0,4,73	0/0:16,0:16:19.53:0,20,104	0/0:26,0:26:60.74:0,61,305	0/0:5,0:5:7.69:0,8,49
chr10	57154125	.	GTTTTTTT	G	5260.63	PASS	AB=0.895;AC=30;AF=0.536;AN=56;BaseQRankSum=5.958;DP=530;FS=1.770;HRun=15;HaplotypeScore=251.8662;InbreedingCoeff=0.0944;MQ=45.74;MQ0=20;MQRankSum=-9.853;QD=16.24;ReadPosRankSum=6.991;VQSLOD=0.4003;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:41:99:0,116,3765	0/1:6,1:7:64.48:64,0,86	0/0:54,0:13:36.10:0,36,730	0/0:41,0:13:21.24:0,21,282	0/0:27,0:28:78.54:0,79,2322	0/1:10,1:11:14.77:15,0,182	0/1:14,2:15:44.78:219,0,45	0/1:16,5:19:48.40:334,0,48	1/1:10,1:10:24.03:271,24,0	1/1:11,4:15:41.26:502,41,0	1/1:10,1:11:15.13:306,15,0	0/1:16,3:19:99:185,0,186	0/0:12,0:19:39.60:0,40,1270	0/0:13,0:15:36.12:0,36,1149	1/1:15,2:17:35.43:479,35,0	0/1:16,2:17:32.40:32,0,199	0/1:24,2:24:99:165,0,112	0/1:17,0:17:19.16:19,0,158	0/1:18,0:16:54.86:261,0,55	1/1:8,3:11:5.99:198,6,0	0/0:6,0:6:4.50:0,5,13	0/1:15,6:21:99:148,0,208	0/1:13,2:15:74.28:186,0,74	0/1:12,1:13:50.89:206,0,51	1/1:4,5:9:10.52:235,11,0	1/1:14,2:16:15.30:309,15,0	1/1:19,7:26:78.22:993,78,0	1/1:5,0:5:12.02:131,12,0
chr10	57154127	.	T	TG	1528.39	PASS	AB=0.983;AC=30;AF=0.536;AN=56;BaseQRankSum=8.254;DP=522;FS=8.241;HRun=0;HaplotypeScore=221.6915;InbreedingCoeff=0.5486;MQ=48.55;MQ0=17;MQRankSum=-10.999;QD=5.54;ReadPosRankSum=3.796;VQSLOD=2.3516;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,109,1122	1/1:2,5:7:11.20:37,11,0	0/0:50,0:14:32.24:0,32,377	0/0:42,0:14:14.20:0,14,109	0/0:29,0:28:77.27:0,77,775	1/1:3,7:10:27.46:167,27,0	1/1:7,8:15:30.33:121,30,0	1/1:20,0:18:10.70:92,11,0	0/0:11,0:10:6.75:0,7,56	0/1:15,0:15:16.84:29,0,17	0/1:11,0:11:13.92:14,0,18	1/1:8,11:19:42.30:172,42,0	0/0:19,0:19:38.96:0,39,413	0/0:16,0:16:39.48:0,39,396	0/0:17,0:17:15.44:0,15,88	1/1:9,9:17:39.84:180,40,0	1/1:14,11:22:43.99:193,44,0	1/1:6,10:16:40.50:252,41,0	0/1:16,2:16:11.66:12,0,55	0/1:11,0:11:8.34:8,0,19	1/1:6,0:6:2.99:27,3,0	1/1:10,11:21:22.73:165,23,0	1/1:9,6:15:22.27:95,22,0	1/1:7,6:13:17.90:91,18,0	0/1:9,0:9:0.27:21,0,0	0/0:16,0:16:5.68:0,6,57	0/1:26,0:26:25.17:54,0,25	0/0:5,0:5:10.91:0,11,37
chr10	57154130	.	T	TGGGG	14248.95	PASS	AB=0.798;AC=42;AF=0.750;AN=56;BaseQRankSum=13.123;DP=519;FS=4.678;HRun=0;HaplotypeScore=215.9518;InbreedingCoeff=0.7521;MQ=52.77;MQ0=15;MQRankSum=-11.841;QD=43.98;ReadPosRankSum=9.748;VQSLOD=4.4580;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,121,2297	1/1:7,0:7:21.07:441,21,0	0/0:49,0:16:38.12:0,38,733	0/0:39,0:14:26.35:0,26,341	0/0:30,0:29:80.28:0,80,1543	1/1:10,0:10:25.70:503,26,0	1/1:16,0:15:0.91:573,1,0	0/1:17,3:18:10.59:513,0,11	1/1:1,8:8:24.08:518,24,0	1/1:6,10:16:35.67:833,36,0	1/1:3,8:11:33.10:603,33,0	1/1:19,0:19:40.59:985,41,0	0/0:19,0:19:39.13:0,39,790	0/0:17,0:17:45.15:0,45,893	1/1:4,13:17:50.97:1020,51,0	1/1:18,0:17:29.70:862,30,0	1/1:25,0:22:35.43:869,35,0	1/1:17,1:18:35.57:810,36,0	0/1:10,6:14:16.81:510,0,17	1/1:6,5:11:27.08:418,27,0	1/1:6,0:6:11.87:109,12,0	1/1:21,0:21:23.74:910,24,0	1/1:14,1:15:6.51:628,7,0	1/1:13,2:15:38.87:612,39,0	1/1:7,1:8:20.11:149,20,0	1/1:7,8:16:38.59:605,39,0	1/1:8,17:26:78.27:1500,78,0	1/1:0,4:4:12.04:279,12,0
chr10	57154132	.	T	TGGGGGG	23186.91	PASS	AB=0.947;AC=42;AF=0.750;AN=56;BaseQRankSum=12.137;DP=573;FS=2.193;HRun=0;HaplotypeScore=234.5465;InbreedingCoeff=0.8050;MQ=51.52;MQ0=13;MQRankSum=-11.578;QD=60.54;ReadPosRankSum=7.845;VQSLOD=4.6642;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:91.50:0,91,2702	1/1:5,5:10:30.10:801,30,0	0/0:46,0:16:45.13:0,45,929	0/0:38,0:13:29.43:0,29,452	0/0:29,0:28:80.51:0,81,1853	1/1:5,7:12:19.85:902,20,0	1/1:8,8:15:31.98:939,32,0	0/1:25,0:23:10.40:1115,0,10	1/1:11,0:10:30.09:717,30,0	1/1:21,0:21:63.21:1494,63,0	1/1:13,0:13:39.12:921,39,0	1/1:10,11:21:53.72:1384,54,0	0/0:20,0:20:42.13:0,42,945	0/0:17,0:17:48.14:0,48,1040	1/1:18,0:18:54.16:1325,54,0	1/1:13,9:21:53.97:1581,54,0	1/1:18,11:27:53.66:1589,54,0	1/1:7,10:17:51.13:1303,51,0	0/1:15,2:16:54.86:718,0,55	1/1:14,0:14:30.04:596,30,0	1/1:8,0:8:11.96:237,12,0	1/1:13,11:24:51.31:1524,51,0	1/1:8,6:14:31.24:829,31,0	1/1:18,6:24:40.13:1253,40,0	1/1:12,0:12:32.88:402,33,0	1/1:20,0:20:48.07:1003,48,0	1/1:31,0:31:93.32:2220,93,0	1/1:4,0:4:12.04:333,12,0
chr10	57154822	.	G	GTAAAGAC	29476.11	PASS	AC=40;AF=0.769;AN=52;BaseQRankSum=14.531;DP=452;FS=0.752;HRun=0;HaplotypeScore=169.6804;InbreedingCoeff=0.9485;MQ=96.30;MQ0=0;MQRankSum=-16.503;QD=104.90;ReadPosRankSum=4.007;VQSLOD=6.4187;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,117,3158	1/1:1,3:4:9.03:376,9,0	0/0:22,0:22:65.59:0,66,1662	0/0:31,0:31:87.18:0,87,2103	0/0:14,0:14:39.02:0,39,942	1/1:0,12:13:36.12:1474,36,0	1/1:1,12:16:33.11:1286,33,0	1/1:0,11:16:48.16:1686,48,0	1/1:0,17:20:57.20:2349,57,0	1/1:0,14:15:42.14:1751,42,0	./.	1/1:0,21:22:57.20:2356,57,0	0/0:32,0:32:93.32:0,93,2457	0/0:32,0:32:96.33:0,96,2659	1/1:0,23:23:66.23:2754,66,0	1/1:0,14:15:42.14:1753,42,0	1/1:0,19:20:51.18:2063,51,0	1/1:0,10:9:30.10:1255,30,0	1/1:0,8:9:24.08:1001,24,0	1/1:0,15:17:51.18:1892,51,0	1/1:0,8:13:18.06:589,18,0	1/1:1,6:7:18.06:746,18,0	1/1:0,1:2:3.01:125,3,0	1/1:0,8:10:21.33:705,21,0	1/1:0,13:15:42.14:1582,42,0	1/1:0,12:12:36.12:1497,36,0	1/1:0,18:22:53.70:2237,54,0	./.
chr10	57155270	.	GA	G	17131.77	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=13.968;DP=694;FS=1.834;HRun=3;HaplotypeScore=98.8529;InbreedingCoeff=0.9997;MQ=69.74;MQ0=0;MQRankSum=-3.644;QD=33.07;ReadPosRankSum=6.221;VQSLOD=4.5370;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,166,2345	1/1:0,11:11:27.08:335,27,0	0/0:28,0:27:81.22:0,81,1095	0/0:24,0:24:59.28:0,59,806	0/0:20,0:20:60.19:0,60,844	1/1:0,18:18:45.14:558,45,0	1/1:3,27:30:81.25:1004,81,0	1/1:1,26:27:78.23:953,78,0	1/1:1,20:21:57.18:706,57,0	1/1:3,26:29:78.23:954,78,0	1/1:0,16:16:48.15:594,48,0	1/1:0,17:17:51.16:632,51,0	0/0:25,0:25:75.23:0,75,1056	0/0:24,0:24:72.23:0,72,1014	1/1:0,28:28:78.25:966,78,0	1/1:0,21:21:57.18:706,57,0	1/1:2,35:37:96.25:1171,96,0	1/1:0,33:33:90.25:1098,90,0	1/1:1,26:27:78.24:964,78,0	1/1:1,21:22:54.17:669,54,0	1/1:3,32:35:81.25:1004,81,0	1/1:0,26:26:63.20:781,63,0	1/1:1,20:21:60.19:743,60,0	1/1:0,16:16:39.12:483,39,0	1/1:1,19:20:51.16:632,51,0	1/1:1,31:32:93.28:1140,93,0	1/1:1,20:21:54.17:668,54,0	1/1:0,10:10:30.09:371,30,0
chr10	57155923	.	C	CT	5298.20	PASS	AB=0.987;AC=43;AF=0.768;AN=56;BaseQRankSum=-4.039;DP=677;FS=14.874;HRun=6;HaplotypeScore=184.0103;InbreedingCoeff=0.0747;MQ=70.86;MQ0=1;MQRankSum=-0.600;QD=8.77;ReadPosRankSum=4.666;VQSLOD=1.3879;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:30:11.91:12,0,118	1/1:0,4:6:15.05:182,15,0	0/0:40,0:32:21.12:0,21,383	0/0:31,0:24:4.72:0,5,148	0/1:17,0:17:41.40:41,0,88	1/1:18,0:18:48.76:286,49,0	1/1:29,0:29:72.40:462,72,0	1/1:5,26:33:80.74:799,81,0	0/1:17,0:18:4.22:16,0,4	1/1:37,0:37:24.95:213,25,0	1/1:14,0:14:11.55:119,12,0	1/1:34,0:34:92.37:606,92,0	0/1:17,0:17:24:24,0,33	0/1:19,0:19:36.44:36,0,79	1/1:26,0:26:2.58:83,3,0	1/1:16,0:16:43.29:270,43,0	1/1:33,0:33:79.36:436,79,0	1/1:14,0:14:31.86:186,32,0	1/1:24,0:24:22.12:132,22,0	1/1:27,1:28:0.04:149,0,0	0/1:34,0:34:12.45:75,0,12	1/1:21,0:21:51.29:306,51,0	1/1:22,0:22:54.07:322,54,0	1/1:26,0:26:61.56:337,62,0	1/1:19,0:19:5.92:106,6,0	0/1:35,0:35:3.95:31,0,4	0/1:19,0:19:5.42:18,0,5	0/1:14,1:15:2.64:49,0,3
chr10	57155929	.	TG	T	4488.10	PASS	AB=0.968;AC=25;AF=0.446;AN=56;BaseQRankSum=-3.545;DP=658;FS=4.175;HRun=10;HaplotypeScore=189.3189;InbreedingCoeff=0.7315;MQ=72.20;MQ0=1;MQRankSum=-4.886;QD=12.75;ReadPosRankSum=0.635;VQSLOD=2.8234;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:36:32.20:0,32,218	1/1:9,0:9:18.20:82,18,0	0/1:43,2:35:55.90:56,0,274	0/1:33,0:27:15.28:15,0,104	0/0:13,0:18:14.15:0,14,87	1/1:2,15:17:44.99:390,45,0	1/1:6,21:28:62.56:514,63,0	1/1:29,0:29:12.14:191,12,0	0/0:14,0:16:1.34:0,1,76	0/1:33,0:35:2.01:2,0,137	0/0:13,0:13:18:0,18,78	1/1:9,23:32:74.90:638,75,0	0/0:12,0:21:25.97:0,26,151	0/0:8,0:18:26.32:0,26,188	0/0:23,0:25:12.02:0,12,109	1/1:3,13:17:38.78:325,39,0	1/1:3,26:29:75.41:644,75,0	1/1:2,9:11:26.99:234,27,0	0/0:22,0:22:36.63:0,37,140	0/0:26,0:26:23.94:0,24,180	0/0:33,0:34:5.09:0,5,201	1/1:2,17:20:50.86:430,51,0	1/1:3,16:19:47.99:415,48,0	1/1:2,24:27:65.26:552,65,0	0/0:15,0:15:4.88:0,5,62	0/0:31,0:32:30.92:0,31,238	0/0:17,0:17:16.46:0,16,73	0/0:13,0:13:16.54:0,17,101
chr10	57155963	.	TTGTGTGTGTATG	T	12856.53	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=10.152;DP=558;FS=23.054;HRun=0;HaplotypeScore=250.8239;InbreedingCoeff=0.9375;MQ=59.77;MQ0=5;MQRankSum=-5.391;QD=31.36;ReadPosRankSum=4.797;VQSLOD=2.8791;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:62.39:0,62,3047	1/1:2,0:7:17.41:395,17,0	0/0:33,0:20:12.19:0,12,533	0/0:34,0:21:36.37:0,36,695	0/0:14,0:14:33.53:0,34,1385	1/1:12,0:16:30.01:498,30,0	1/1:19,0:23:41.94:491,42,0	1/1:21,0:21:44.89:379,45,0	1/1:2,12:15:24.05:760,24,0	1/1:4,21:26:54.50:1178,55,0	1/1:2,5:8:6.02:217,6,0	1/1:13,0:22:45.03:801,45,0	0/0:13,0:13:30.07:0,30,1336	0/0:20,0:20:48.15:0,48,2571	1/1:4,20:26:35.79:1103,36,0	1/1:5,0:13:30.06:751,30,0	1/1:19,0:23:41.90:581,42,0	1/1:5,0:8:20.92:346,21,0	1/1:8,15:23:41.90:614,42,0	1/1:5,13:18:15.94:505,16,0	1/1:33,0:32:35.90:288,36,0	1/1:9,0:13:15.02:313,15,0	1/1:10,0:14:21.01:311,21,0	1/1:20,0:24:14.77:109,15,0	1/1:2,12:15:24.08:748,24,0	1/1:4,26:32:75.06:1651,75,0	1/1:1,20:21:17.80:651,18,0	1/1:3,6:9:6.02:168,6,0
chr10	57156637	.	T	TC	17050.60	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=10.405;DP=565;FS=12.845;HRun=1;HaplotypeScore=83.3479;InbreedingCoeff=0.9966;MQ=83.87;MQ0=0;MQRankSum=-4.886;QD=39.84;ReadPosRankSum=1.643;VQSLOD=4.3778;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:93.28:0,93,1189	1/1:1,10:11:27.03:405,27,0	0/0:16,0:16:39.10:0,39,485	0/0:21,0:21:57.17:0,57,712	0/0:31,0:30:93.30:0,93,1207	1/1:2,11:13:33.11:495,33,0	1/1:3,15:18:42.14:630,42,0	1/1:4,28:32:93.28:1330,93,0	1/1:1,17:18:45.11:649,45,0	1/1:4,16:20:51.17:753,51,0	1/1:0,19:19:51.17:764,51,0	1/1:3,16:19:39.13:584,39,0	0/0:16,0:16:48.14:0,48,608	0/0:22,0:22:63.20:0,63,816	1/1:3,13:16:30.10:450,30,0	1/1:0,7:7:18.06:270,18,0	1/1:0,23:23:66.22:989,66,0	1/1:0,26:26:69.23:1034,69,0	1/1:3,17:20:60.20:876,60,0	1/1:1,20:21:48.16:719,48,0	1/1:1,32:33:90.30:1349,90,0	1/1:1,7:8:21.07:314,21,0	1/1:0,8:8:24.08:360,24,0	1/1:0,32:32:96.33:1439,96,0	1/1:1,18:19:51.17:764,51,0	1/1:1,23:24:69.23:1034,69,0	1/1:0,31:31:93.32:1394,93,0	1/1:0,10:10:30.10:449,30,0
chr10	57156770	.	T	TA	12660.01	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=11.586;DP=516;FS=1.774;HRun=6;HaplotypeScore=94.2337;InbreedingCoeff=0.9956;MQ=70.98;MQ0=0;MQRankSum=-2.202;QD=32.21;ReadPosRankSum=1.627;VQSLOD=4.7247;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:90.13:0,90,892	1/1:0,7:7:18.06:226,18,0	0/0:10,0:10:27.05:0,27,272	0/0:13,0:13:35.49:0,35,322	0/0:30,0:30:78.18:0,78,796	1/1:0,19:19:54.17:678,54,0	1/1:0,15:15:42.13:528,42,0	1/1:1,15:16:42.12:515,42,0	1/1:0,15:15:42.13:528,42,0	1/1:3,15:18:42.13:529,42,0	1/1:2,9:11:24.08:302,24,0	1/1:3,12:15:33.11:415,33,0	0/0:18,0:18:54.12:0,54,551	0/0:22,0:22:63.12:0,63,633	1/1:1,15:16:39.12:490,39,0	1/1:2,11:13:27.09:340,27,0	1/1:2,24:26:63.20:792,63,0	1/1:0,16:16:45.14:566,45,0	1/1:2,23:25:72.20:873,72,0	1/1:1,20:21:60.15:737,60,0	1/1:1,16:17:45.14:566,45,0	1/1:0,7:7:17.99:207,18,0	1/1:3,18:21:50.99:600,51,0	1/1:3,16:19:45.14:566,45,0	1/1:1,21:22:60.19:755,60,0	1/1:5,28:33:84.21:1012,84,0	1/1:3,29:32:87.28:1093,87,0	1/1:0,9:9:27.09:340,27,0
chr10	57157141	.	GCACACACACTCA	G	3853.61	PASS	AB=0.788;AC=31;AF=0.674;AN=46;BaseQRankSum=5.303;DP=708;FS=9.223;HRun=0;HaplotypeScore=265.4203;InbreedingCoeff=0.6221;MQ=61.26;MQ0=5;MQRankSum=-5.318;QD=9.98;ReadPosRankSum=0.899;VQSLOD=0.7269;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,108,5230	./.	0/0:39,0:27:8.78:0,9,310	0/0:41,0:29:19.30:0,19,553	0/0:28,0:28:57.20:0,57,3184	./.	1/1:12,5:17:6.02:193,6,0	0/1:24,0:19:2.41:201,0,2	1/1:22,7:29:6.02:179,6,0	1/1:36,5:40:30.06:849,30,0	1/1:13,3:16:3.01:93,3,0	0/1:14,13:27:0:0,0,0	0/0:25,0:25:63.22:0,63,3294	0/0:34,0:34:87.28:0,87,4346	./.	1/1:12,16:28:6.02:176,6,0	1/1:21,6:27:2.70:103,3,0	1/1:16,1:17:6.02:161,6,0	1/1:17,3:20:12.04:372,12,0	./.	1/1:23,1:24:3.01:49,3,0	0/1:16,13:29:0:0,0,1	1/1:19,2:21:9.02:169,9,0	1/1:14,5:18:0.43:1,0,0	./.	1/1:22,5:26:21.07:678,21,0	1/1:8,7:15:18.06:608,18,0	1/1:4,1:5:2.98:22,3,0
chr10	57157230	.	TAC	T	778.61	PASS	AB=0.818;AC=21;AF=0.457;AN=46;BaseQRankSum=11.553;DP=576;FS=31.067;HRun=0;HaplotypeScore=156.3844;InbreedingCoeff=0.3722;MQ=55.85;MQ0=5;MQRankSum=-11.171;QD=3.40;ReadPosRankSum=1.031;VQSLOD=1.2949;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,108,1770	0/0:5,3:8:2.80:0,3,13	0/0:51,0:43:80.97:0,81,1427	0/0:51,0:39:67.32:0,67,950	0/0:32,0:32:93.32:0,93,1578	0/0:6,3:9:2.74:0,3,12	0/1:11,3:14:0.10:0,0,1	0/1:20,4:16:5:68,0,5	1/1:16,0:18:3.36:42,3,0	0/1:23,1:25:5.64:148,0,6	./.	1/1:6,11:17:2.83:34,3,0	0/0:37,0:37:99:0,108,1777	0/0:39,0:39:99:0,111,1848	0/1:13,0:14:0:1,0,0	1/1:11,15:26:5.91:80,6,0	0/1:6,5:11:2.93:44,0,3	0/1:1,1:2:5.50:25,0,5	1/1:16,0:16:1.53:80,2,0	1/1:18,0:18:0.47:1,0,0	./.	./.	0/0:8,4:12:0.47:0,0,1	./.	./.	1/1:21,0:23:30.63:228,31,0	0/1:12,0:15:6.84:95,0,7	1/1:6,0:6:11.17:73,11,0
chr10	57157236	.	C	CAT	1854.48	PASS	AB=0.779;AC=17;AF=0.370;AN=46;BaseQRankSum=8.165;DP=546;FS=9.342;HRun=0;HaplotypeScore=141.4738;InbreedingCoeff=0.0333;MQ=56.52;MQ0=4;MQRankSum=-9.095;QD=10.36;ReadPosRankSum=-2.378;VQSLOD=2.5512;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,108,1612	1/1:4,3:7:2.69:44,3,0	0/0:48,0:41:99:0,104,1372	0/0:48,0:33:72.67:0,73,950	0/0:33,0:33:93.32:0,93,1416	1/1:6,3:9:3.01:44,3,0	0/0:9,1:10:0.44:0,0,1	0/1:16,4:12:26.79:95,0,27	0/0:14,4:18:9.27:0,9,54	0/1:10,15:26:48.35:773,0,48	./.	1/1:14,2:16:2.85:34,3,0	0/0:37,0:37:91.01:0,91,1578	0/0:39,0:39:99:0,117,1718	1/1:11,5:16:0.11:0,0,0	0/0:19,7:26:0.31:0,0,8	0/1:9,2:11:1.39:53,0,1	0/1:2,0:2:13.24:30,0,13	0/1:8,5:13:61.92:197,0,62	0/1:11,5:16:0.08:0,0,0	./.	./.	0/0:5,6:11:3:0,3,26	./.	./.	0/1:13,10:23:99:466,0,111	0/1:10,4:14:61.31:207,0,61	0/1:4,2:6:36.81:40,0,37
chr10	57157238	.	CAT	C	1042.97	PASS	AB=0.952;AC=22;AF=0.478;AN=46;BaseQRankSum=8.226;DP=535;FS=24.949;HRun=0;HaplotypeScore=139.6026;InbreedingCoeff=0.4629;MQ=56.93;MQ0=3;MQRankSum=-7.770;QD=5.06;ReadPosRankSum=-0.985;VQSLOD=1.0616;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,108,1891	0/0:7,0:7:2.87:0,3,17	0/0:42,0:37:94.30:0,94,1549	0/0:49,0:35:44.33:0,44,1037	0/0:32,0:32:93.32:0,93,1772	0/0:8,0:8:2.50:0,2,9	0/0:8,0:8:2.40:0,2,21	0/1:18,0:8:23.82:24,0,39	1/1:9,9:18:6.91:84,7,0	1/1:21,4:25:0.18:159,0,0	./.	1/1:16,0:16:3.36:17,3,0	0/0:37,0:37:99:0,110,2022	0/0:38,0:38:99:0,114,2115	0/1:13,4:17:0:1,0,0	1/1:26,0:26:5.86:44,6,0	0/1:12,0:12:2.15:60,0,2	0/1:2,0:2:6.32:6,0,25	1/1:9,4:13:12.47:193,12,0	1/1:7,10:17:0.47:1,0,0	./.	./.	0/0:11,0:11:3:0,3,26	./.	./.	1/1:15,8:23:14.29:352,14,0	1/1:11,3:14:4.26:131,4,0	1/1:2,3:5:8.26:121,8,0
chr10	57157244	.	CAGAG	C	167.64	PASS	AB=0.958;AC=11;AF=0.239;AN=46;BaseQRankSum=8.885;DP=534;FS=9.002;HRun=0;HaplotypeScore=154.6283;InbreedingCoeff=-0.0422;MQ=56.85;MQ0=2;MQRankSum=-8.472;QD=0.97;ReadPosRankSum=2.104;VQSLOD=1.8768;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,99,2607	0/0:6,0:6:3:0,3,27	0/0:41,0:34:65.53:0,66,1851	0/0:50,0:35:47.29:0,47,1449	0/0:35,0:35:96.33:0,96,2555	0/0:8,0:8:2.94:0,3,18	0/0:7,0:7:0.47:0,0,1	0/1:18,0:8:1.44:1,0,46	0/1:19,0:19:4.50:5,0,6	0/1:23,0:23:25.62:117,0,26	./.	0/1:15,0:15:0:0,0,0	0/0:38,0:38:99:0,111,2845	0/0:40,0:40:99:0,117,3077	0/1:18,0:18:0.08:1,0,0	0/0:25,0:25:2.79:0,3,13	0/1:11,0:12:13.77:14,0,20	0/0:3,0:3:0.62:0,1,77	0/1:13,0:13:17.60:18,0,37	0/0:17,0:17:0.45:0,0,2	0/1:5,8:13:0:0,0,0	./.	./.	./.	./.	0/1:24,0:24:77.82:78,0,90	0/1:13,0:13:31.26:38,0,31	0/1:5,0:5:2.16:2,0,29
chr10	57157249	.	A	AGAGT	919.18	PASS	AB=0.954;AC=14;AF=0.304;AN=46;BaseQRankSum=5.862;DP=534;FS=20.514;HRun=0;HaplotypeScore=156.5327;InbreedingCoeff=0.1105;MQ=55.83;MQ0=2;MQRankSum=-6.245;QD=5.00;ReadPosRankSum=-2.970;VQSLOD=0.9142;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,105,1930	0/0:4,2:6:3.01:0,3,32	0/0:38,0:31:48.38:0,48,1331	0/0:47,0:33:54.07:0,54,1008	0/0:34,0:34:99:0,99,1831	0/0:7,0:7:3:0,3,27	0/1:5,0:5:0.10:0,0,0	0/0:15,0:6:9.01:0,9,86	1/1:20,0:20:7.75:64,8,0	0/1:24,0:24:99:134,0,332	./.	0/0:8,7:15:0:0,0,1	0/0:37,0:37:99:0,105,1982	0/0:42,0:42:99:0,120,2243	0/1:19,0:19:0.10:0,0,0	0/1:17,6:23:0.02:0,0,0	0/0:8,4:12:12.50:0,13,152	0/1:2,1:3:43.66:64,0,44	0/1:13,0:13:99:183,0,108	1/1:18,0:18:0.17:0,0,0	0/1:13,0:13:0:0,0,0	./.	./.	./.	./.	0/1:26,0:26:99:341,0,191	0/1:15,0:15:91.74:131,0,92	0/1:5,0:5:10.44:118,0,10
chr10	57157254	.	CACACAG	C	3431.42	PASS	AB=0.755;AC=14;AF=0.304;AN=46;BaseQRankSum=8.745;DP=518;FS=14.490;HRun=0;HaplotypeScore=147.9723;InbreedingCoeff=0.0277;MQ=56.27;MQ0=2;MQRankSum=-9.659;QD=20.07;ReadPosRankSum=2.675;VQSLOD=2.2269;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,105,3378	0/0:6,0:6:3.01:0,3,48	0/0:40,0:30:67.10:0,67,1949	0/0:47,0:32:69.07:0,69,2070	0/0:34,0:34:99:0,99,3473	0/0:6,0:6:3.01:0,3,43	1/1:4,0:4:0.47:1,0,0	0/1:16,0:8:3.01:3,0,93	0/0:9,9:18:5.99:0,6,66	0/1:4,19:23:99:1291,0,102	./.	0/1:16,0:16:0:0,0,0	0/0:34,0:34:99:0,99,3521	0/0:45,0:45:99:0,132,4309	0/1:4,14:18:0.08:1,0,0	0/1:18,1:19:0.03:0,0,0	0/0:12,0:12:3.48:0,3,67	0/1:3,0:3:5.66:6,0,21	0/1:4,9:13:97.41:483,0,97	1/1:10,8:18:3.40:71,3,0	0/0:11,1:12:0:0,0,0	./.	./.	./.	./.	0/1:9,15:24:99:962,0,105	0/1:3,9:12:47.60:480,0,48	0/1:3,2:5:53.91:133,0,54
chr10	57157258	.	CAG	C	1725.05	PASS	AB=0.626;AC=29;AF=0.659;AN=44;BaseQRankSum=12.628;DP=509;FS=44.272;HRun=0;HaplotypeScore=128.7587;InbreedingCoeff=0.7245;MQ=57.39;MQ0=2;MQRankSum=-11.824;QD=8.14;ReadPosRankSum=0.049;VQSLOD=0.9699;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,1:40:95.98:0,96,1776	1/1:2,4:6:3.01:32,3,0	0/0:38,0:28:71.67:0,72,1056	0/0:45,0:32:35.94:0,36,1051	0/0:34,0:34:99:0,99,1848	1/1:1,5:6:3.01:36,3,0	0/1:1,4:5:0:0,0,0	1/1:3,13:8:14.95:173,15,0	1/1:14,2:16:5.95:51,6,0	1/1:22,1:23:60.34:402,60,0	./.	0/1:10,7:17:0.02:0,0,0	0/0:34,0:34:99:0,102,1876	0/0:44,0:44:99:0,129,2282	1/1:18,0:18:0.47:1,0,0	0/1:7,12:19:0.02:0,0,0	1/1:5,7:12:10.68:136,11,0	1/1:0,2:2:6.01:74,6,0	1/1:13,1:14:32.52:234,33,0	1/1:15,3:18:3.41:19,3,0	./.	./.	./.	./.	./.	1/1:19,5:24:58.10:456,58,0	1/1:10,1:11:26.67:191,27,0	1/1:4,1:5:11.78:74,12,0
chr10	57157286	.	T	TAC	4393.23	PASS	AB=0.675;AC=24;AF=0.600;AN=40;BaseQRankSum=9.013;DP=536;FS=33.510;HRun=0;HaplotypeScore=113.0903;InbreedingCoeff=0.5992;MQ=49.45;MQ0=8;MQRankSum=-11.117;QD=20.92;ReadPosRankSum=0.599;VQSLOD=3.2765;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:37:94.55:0,95,1210	./.	0/0:34,0:20:42.21:0,42,481	0/0:40,0:26:55.28:0,55,745	0/0:34,0:34:84.20:0,84,1082	1/1:3,8:11:3.01:53,3,0	0/0:2,9:11:0.47:0,0,1	0/1:21,18:28:4.97:738,0,5	1/1:2,16:18:8.96:123,9,0	1/1:4,23:27:78.11:1276,78,0	./.	1/1:1,16:17:2.86:53,3,0	0/0:31,0:31:86.96:0,87,1096	0/0:45,0:45:99:0,126,1617	1/1:4,16:20:2.65:53,3,0	./.	1/1:2,6:8:6.02:102,6,0	0/1:1,1:2:14.92:47,0,15	1/1:9,8:15:33.04:482,33,0	1/1:1,13:14:2.75:18,3,0	./.	./.	./.	./.	./.	1/1:3,19:22:13.13:845,13,0	1/1:2,10:12:27.03:446,27,0	1/1:0,3:3:9.03:156,9,0
chr10	57157316	.	T	TAC	4064.33	PASS	AB=0.625;AC=23;AF=0.548;AN=42;BaseQRankSum=3.640;DP=587;FS=26.507;HRun=0;HaplotypeScore=122.4832;InbreedingCoeff=0.7083;MQ=45.75;MQ0=4;MQRankSum=-8.735;QD=19.73;ReadPosRankSum=0.627;VQSLOD=2.0479;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:66.13:0,66,1198	1/1:1,7:8:3.01:49,3,0	0/0:44,0:30:66.15:0,66,832	0/0:50,0:37:90.16:0,90,1116	0/0:34,0:34:66.19:0,66,829	0/1:4,6:10:0:0,0,0	0/0:2,8:10:0.42:0,0,0	1/1:25,34:48:73.69:1514,74,0	1/1:3,13:16:6.02:101,6,0	1/1:11,19:30:62.24:999,62,0	./.	1/1:4,15:19:2.91:51,3,0	0/0:32,0:32:78.23:0,78,1007	0/0:44,0:44:99:0,111,1441	./.	./.	1/1:4,2:6:0.47:1,0,0	1/1:0,1:1:3.01:40,3,0	1/1:8,5:10:15.05:251,15,0	0/0:3,14:17:0:0,0,0	0/0:5,4:10:0:0,0,0	./.	./.	./.	./.	1/1:12,9:23:32.91:539,33,0	1/1:4,12:16:23.93:384,24,0	1/1:1,3:4:9.03:137,9,0
chr10	57157339	.	ACACACACACATG	A	3679.88	PASS	AB=0.723;AC=21;AF=0.457;AN=46;BaseQRankSum=9.154;DP=577;FS=8.788;HRun=0;HaplotypeScore=170.0883;InbreedingCoeff=0.5060;MQ=42.98;MQ0=14;MQRankSum=-8.669;QD=17.36;ReadPosRankSum=-0.080;VQSLOD=2.0906;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:45:97.88:0,98,4767	1/1:4,5:9:3.28:97,3,0	0/0:59,0:28:32.30:0,32,1264	0/0:65,0:40:77.88:0,78,2199	0/0:35,0:35:57.20:0,57,2685	0/1:3,3:6:0.07:0,0,0	0/1:5,3:8:0.13:0,0,0	0/1:47,0:37:85.76:144,0,86	1/1:9,7:16:6.02:166,6,0	1/1:15,13:28:63.21:1804,63,0	./.	0/1:8,9:17:0:0,0,0	0/0:30,0:30:84.29:0,84,4390	0/0:45,0:45:99:0,117,5671	0/1:5,8:13:0:0,0,0	0/1:4,3:7:0:0,0,0	0/0:4,0:4:1.25:0,1,3	0/0:2,0:3:1.55:0,2,4	1/1:10,1:6:2.08:173,2,0	0/1:9,7:16:0:1,0,0	0/0:8,2:9:0.47:0,0,1	./.	./.	./.	./.	1/1:14,6:20:3.27:803,3,0	1/1:5,7:12:12.04:382,12,0	1/1:1,1:2:3.01:108,3,0
chr10	57157349	.	ATG	A	190.97	PASS	AB=1.000;AC=20;AF=0.476;AN=42;BaseQRankSum=9.095;DP=515;FS=3.647;HRun=0;HaplotypeScore=99.7852;InbreedingCoeff=0.3102;MQ=41.94;MQ0=20;MQRankSum=-7.675;QD=1.38;ReadPosRankSum=2.554;VQSLOD=1.3222;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,2:42:99:0,102,1906	1/1:8,0:8:2.69:9,3,0	0/0:58,1:18:45.97:0,46,799	0/0:69,0:37:86.14:0,86,1619	0/0:33,0:33:63.22:0,63,1196	0/1:6,0:6:0.22:0,0,0	0/1:7,0:7:0:1,0,0	0/1:18,0:13:25.04:25,0,37	1/1:11,0:12:2.01:17,2,0	0/1:23,0:23:30.80:114,0,31	./.	./.	0/0:34,0:34:76.05:0,76,1863	0/0:51,0:51:99:0,144,2687	0/1:9,0:9:0:0,0,0	./.	1/1:1,1:2:3.01:36,3,0	1/1:2,0:2:2.96:19,3,0	0/1:10,0:6:2.72:3,0,10	0/1:14,0:14:0:0,0,0	0/0:9,0:8:0:0,0,0	./.	./.	./.	./.	0/1:16,0:16:43.80:44,0,75	1/1:9,0:9:7.81:33,8,0	1/1:2,0:2:2.88:15,3,0
chr10	57157366	.	TAC	T	2635.01	PASS	AB=0.667;AC=25;AF=0.595;AN=42;BaseQRankSum=11.676;DP=571;FS=8.690;HRun=0;HaplotypeScore=102.4375;InbreedingCoeff=0.5890;MQ=43.97;MQ0=22;MQRankSum=-8.866;QD=14.56;ReadPosRankSum=-1.176;VQSLOD=2.9769;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:49:97.55:0,98,1501	1/1:0,7:7:2.09:34,2,0	0/0:66,0:21:51.09:0,51,784	0/0:73,0:34:68.97:0,69,1009	0/0:31,0:31:51.16:0,51,846	./.	0/0:2,7:9:0:0,0,0	1/1:7,7:10:1.20:200,1,0	1/1:2,13:15:3.01:39,3,0	1/1:5,27:31:90.28:1151,90,0	1/1:1,20:21:2.98:22,3,0	./.	0/0:44,0:44:99:0,126,2100	0/0:49,0:49:99:0,129,2125	./.	./.	0/0:3,0:3:2.84:0,3,14	1/1:1,1:2:2.86:28,3,0	0/1:6,6:9:12.61:227,0,13	1/1:3,16:19:9.03:111,9,0	1/1:5,6:10:5.98:78,6,0	./.	./.	./.	1/1:4,12:16:9.01:102,9,0	1/1:3,16:19:48.15:622,48,0	1/1:1,9:10:13.77:135,14,0	1/1:0,3:3:3.01:39,3,0
chr10	57157383	.	T	TCA	292.79	PASS	AB=0.802;AC=7;AF=0.159;AN=44;BaseQRankSum=2.963;DP=682;FS=31.963;HRun=0;HaplotypeScore=142.1696;InbreedingCoeff=0.5033;MQ=49.86;MQ0=15;MQRankSum=-2.986;QD=6.23;ReadPosRankSum=-1.953;VQSLOD=1.1078;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:67.18:0,67,1152	1/1:4,4:8:3.01:34,3,0	0/0:63,0:29:21.22:0,21,509	0/0:72,0:41:61.80:0,62,771	0/0:37,0:37:54.17:0,54,687	./.	0/1:6,5:11:0:0,0,0	0/1:14,9:17:45.10:317,0,45	0/0:19,0:19:8.99:0,9,97	0/0:52,0:51:99:0,138,1624	0/0:27,0:27:15:0,15,158	./.	0/0:45,0:45:99:0,114,1415	0/0:50,0:50:99:0,126,1589	0/0:16,0:16:2.92:0,3,36	./.	0/1:2,0:2:0:0,0,0	1/1:2,1:3:3.48:43,3,0	0/0:24,0:20:44.97:0,45,532	0/0:25,0:25:33.57:0,34,423	0/0:23,0:23:11.88:0,12,153	./.	./.	./.	0/0:20,0:20:18.06:0,18,231	0/0:26,0:25:63.17:0,63,792	0/0:14,0:14:24.08:0,24,300	0/0:8,0:8:15:0,15,171
chr10	57157392	.	C	CAG	77.76	PASS	AB=1.000;AC=4;AF=0.091;AN=44;BaseQRankSum=3.076;DP=680;FS=23.616;HRun=0;HaplotypeScore=146.9866;InbreedingCoeff=0.3488;MQ=49.91;MQ0=16;MQRankSum=-2.552;QD=2.16;ReadPosRankSum=-1.387;VQSLOD=1.1214;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:46,1:47:94.21:0,94,1341	1/1:8,0:8:2.88:15,3,0	0/0:54,0:26:50.35:0,50,635	0/0:69,0:38:62.20:0,62,1001	0/0:32,0:32:54.18:0,54,771	0/0:5,0:5:0:0,0,0	0/0:9,1:10:0:0,0,0	0/1:24,0:17:99:142,0,130	0/0:17,0:17:11.99:0,12,141	0/0:57,0:56:99:0,156,2032	0/0:27,0:27:24.04:0,24,286	./.	0/0:48,0:47:99:0,114,1556	0/0:49,0:49:99:0,138,1872	0/0:17,0:17:3.01:0,3,43	./.	./.	0/1:4,0:4:16.10:16,0,17	0/0:24,0:19:48.07:0,48,605	0/0:27,0:27:33.57:0,34,470	0/0:29,0:29:18.50:0,18,220	./.	./.	./.	0/0:21,1:22:18.06:0,18,257	0/0:26,0:25:66.19:0,66,908	0/0:13,0:13:24.08:0,24,326	0/0:8,0:8:18.02:0,18,227
chr10	57157424	.	C	CAG	6467.29	PASS	AB=0.654;AC=23;AF=0.575;AN=40;BaseQRankSum=11.215;DP=623;FS=2.684;HRun=0;HaplotypeScore=106.4629;InbreedingCoeff=0.7863;MQ=45.39;MQ0=11;MQRankSum=-7.250;QD=23.43;ReadPosRankSum=4.155;VQSLOD=5.1892;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:69.15:0,69,834	./.	0/0:46,0:25:35.82:0,36,462	0/0:50,0:33:57.98:0,58,676	0/0:31,0:30:45.09:0,45,554	0/0:1,0:2:0:0,0,0	0/0:4,0:11:0:0,0,0	1/1:22,0:28:53.87:458,54,0	1/1:5,8:13:6.02:98,6,0	1/1:15,39:53:97.24:2180,97,0	1/1:6,19:25:24.08:408,24,0	./.	0/0:49,0:48:99:0,102,1251	0/0:52,0:52:99:0,123,1550	./.	./.	./.	1/1:1,0:3:6:54,6,0	0/1:8,9:13:8.76:428,0,9	1/1:9,20:30:21.91:543,22,0	1/1:16,24:41:26.55:388,27,0	./.	./.	./.	1/1:5,14:19:27.09:459,27,0	1/1:7,17:24:54.18:903,54,0	1/1:0,7:7:18.06:305,18,0	1/1:0,7:7:15.05:243,15,0
chr10	57157468	.	CAG	C	2310.44	PASS	AB=0.901;AC=25;AF=0.595;AN=42;BaseQRankSum=7.596;DP=559;FS=4.895;HRun=0;HaplotypeScore=109.7031;InbreedingCoeff=0.6180;MQ=44.58;MQ0=11;MQRankSum=-2.582;QD=8.53;ReadPosRankSum=-5.123;VQSLOD=1.9159;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,2:32:50.40:0,50,838	./.	0/0:51,0:29:75.80:0,76,944	0/0:70,0:51:99:0,114,1667	0/0:33,0:34:51.12:0,51,822	./.	1/1:3,8:11:2.96:39,3,0	0/1:44,13:50:99:556,0,112	./.	1/1:21,6:26:42.04:480,42,0	1/1:10,7:17:15.02:165,15,0	0/0:2,0:2:0.47:0,0,1	0/0:35,0:35:72.22:0,72,1163	0/0:40,0:39:78.25:0,78,1291	0/1:7,1:8:0:0,0,0	./.	./.	1/1:2,1:3:9.03:115,9,0	0/1:15,0:10:79.56:80,0,132	1/1:8,14:22:17.96:161,18,0	1/1:26,8:34:18.04:218,18,0	1/1:6,8:14:3.01:38,3,0	1/1:5,12:17:5.98:47,6,0	./.	1/1:9,6:15:9:86,9,0	1/1:11,4:15:26.98:304,27,0	./.	1/1:14,2:16:11.44:181,11,0
chr10	57157496	.	TAC	T	3544.29	PASS	AB=0.595;AC=32;AF=0.615;AN=52;BaseQRankSum=9.714;DP=554;FS=16.137;HRun=0;HaplotypeScore=96.6141;InbreedingCoeff=0.6533;MQ=39.00;MQ0=18;MQRankSum=-7.631;QD=12.84;ReadPosRankSum=-0.017;VQSLOD=2.0561;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:47.58:0,48,815	0/1:1,2:3:0:0,0,0	0/0:57,0:25:56.31:0,56,758	0/0:66,0:38:56.31:0,56,932	0/0:37,0:37:47.84:0,48,815	0/1:0,3:3:0:0,0,0	0/1:5,11:16:0.01:0,0,0	0/1:30,9:32:99:204,0,629	0/1:1,13:13:0:0,0,0	1/1:8,17:25:59.49:728,59,0	1/1:2,8:10:6.02:78,6,0	0/0:0,8:8:0.47:0,0,1	0/0:34,0:34:66.63:0,67,1012	0/0:39,0:39:66.18:0,66,1066	0/1:1,5:6:0:0,0,0	./.	1/1:0,2:2:6.02:78,6,0	1/1:0,4:4:9.03:117,9,0	1/1:8,7:8:21.07:273,21,0	1/1:4,19:23:18.04:234,18,0	1/1:4,26:30:8.96:117,9,0	1/1:2,10:12:3.01:39,3,0	1/1:2,14:16:9.03:117,9,0	./.	1/1:0,13:13:14.99:175,15,0	1/1:6,19:24:12.27:723,12,0	1/1:0,6:6:9.03:117,9,0	1/1:0,14:14:42.14:546,42,0
chr10	57157562	.	TAC	T	1713.23	PASS	AB=0.969;AC=26;AF=0.591;AN=44;BaseQRankSum=6.071;DP=488;FS=16.589;HRun=0;HaplotypeScore=94.8296;InbreedingCoeff=0.6454;MQ=47.51;MQ0=7;MQRankSum=-6.878;QD=7.23;ReadPosRankSum=-2.465;VQSLOD=1.6494;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:27:4.89:5,0,463	./.	0/0:37,0:20:39.13:0,39,582	0/0:44,0:34:37.52:0,38,682	0/0:41,0:41:49.36:0,49,798	0/0:3,1:4:0:0,0,0	1/1:14,4:18:2.99:38,3,0	1/1:29,7:32:20.23:421,20,0	0/1:14,1:14:0.04:0,0,0	1/1:17,4:21:20.61:214,21,0	1/1:7,1:8:3:25,3,0	0/0:9,0:9:0:0,0,0	0/0:37,0:37:64.72:0,65,1130	0/0:46,0:46:60.66:0,61,964	0/0:7,1:8:2.99:0,3,24	./.	./.	./.	1/1:14,2:11:15.05:188,15,0	1/1:7,8:15:5.97:57,6,0	1/1:20,3:23:12.04:150,12,0	./.	1/1:7,2:9:3.01:38,3,0	./.	1/1:6,7:13:8.96:82,9,0	1/1:13,3:16:18.06:220,18,0	1/1:6,1:7:6.02:73,6,0	1/1:13,0:13:30.06:357,30,0
chr10	57157586	.	CAG	C	586.87	PASS	AB=0.789;AC=15;AF=0.469;AN=32;BaseQRankSum=5.726;DP=314;FS=0.945;HRun=0;HaplotypeScore=64.9585;InbreedingCoeff=0.5282;MQ=54.35;MQ0=6;MQRankSum=-6.847;QD=9.78;ReadPosRankSum=-1.922;VQSLOD=2.6559;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:27.04:0,27,407	./.	0/0:43,0:31:32.34:0,32,724	0/0:38,0:28:39.16:0,39,676	0/0:22,1:23:2.24:0,2,544	./.	1/1:0,4:4:3.01:37,3,0	0/1:11,3:14:4.56:114,0,5	0/0:2,2:3:0.47:0,0,1	1/1:7,8:15:23.74:269,24,0	./.	0/0:1,0:1:0:0,0,0	0/0:40,0:40:1.96:0,2,835	0/0:43,0:43:32.18:0,32,806	1/1:4,1:5:2.68:11,3,0	./.	1/1:0,1:1:2.97:20,3,0	./.	./.	./.	1/1:7,3:10:3.01:37,3,0	./.	./.	./.	./.	1/1:3,4:7:12.04:148,12,0	1/1:0,2:2:6.02:74,6,0	./.
chr10	57159599	.	ACCTTT	A	22561.84	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=16.670;DP=586;FS=0.351;HRun=0;HaplotypeScore=197.3752;InbreedingCoeff=0.9964;MQ=78.12;MQ0=0;MQRankSum=-16.901;QD=52.47;ReadPosRankSum=3.531;VQSLOD=5.1676;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,120,3819	1/1:0,9:9:27.09:601,27,0	0/0:26,0:26:67.68:0,68,1808	0/0:19,0:20:23.20:0,23,1311	0/0:22,0:22:66.23:0,66,2027	1/1:2,25:27:72.25:1572,72,0	1/1:4,18:22:45.15:938,45,0	1/1:6,14:20:39.11:785,39,0	1/1:0,25:25:75.26:1668,75,0	1/1:1,21:22:63.18:1316,63,0	1/1:1,21:22:45.07:843,45,0	1/1:1,22:23:63.15:1349,63,0	0/0:20,0:20:60.19:0,60,1849	0/0:27,0:27:81.28:0,81,2481	1/1:4,25:29:75.26:1655,75,0	1/1:2,23:25:63.22:1394,63,0	1/1:2,11:13:27.01:551,27,0	1/1:1,12:13:33.11:734,33,0	1/1:3,16:19:45.11:916,45,0	1/1:3,14:17:42.07:857,42,0	1/1:3,13:16:24.42:424,24,0	1/1:0,19:19:51.02:951,51,0	1/1:3,20:23:54.18:1055,54,0	1/1:0,11:11:22.32:520,22,0	1/1:1,21:22:57.06:1160,57,0	1/1:2,17:19:51.17:1136,51,0	1/1:1,27:28:78.27:1736,78,0	1/1:0,6:6:18.06:401,18,0
chr10	57161096	.	ACT	A	1533.73	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-0.206;DP=662;FS=7.425;HRun=0;HaplotypeScore=120.1230;InbreedingCoeff=0.9937;MQ=93.13;MQ0=0;MQRankSum=-2.600;QD=39.33;ReadPosRankSum=-2.768;VQSLOD=4.6340;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:81.24:0,81,1494	1/1:0,9:9:21.07:321,21,0	0/0:24,0:24:66.18:0,66,1178	0/0:35,0:35:95.26:0,95,1644	0/0:24,0:24:72.25:0,72,1340	0/0:19,0:19:57.20:0,57,1083	0/0:18,0:17:54.19:0,54,1043	1/1:0,30:30:90.27:1334,90,0	0/0:20,0:20:60.21:0,60,1150	0/0:26,0:26:75.25:0,75,1389	0/0:15,0:15:45.12:0,45,771	0/0:27,0:27:78.25:0,78,1446	0/0:21,0:21:63.20:0,63,1174	0/0:27,0:27:78.27:0,78,1506	0/0:33,0:33:96.30:0,96,1760	0/0:25,0:25:75.24:0,75,1415	0/0:32,0:32:96.32:0,96,1785	0/0:28,0:28:81.23:0,81,1517	0/0:17,0:17:51.16:0,51,952	0/0:20,0:20:60.21:0,60,1147	0/0:48,0:48:99:0,144,2621	0/0:13,0:13:39.12:0,39,720	0/0:19,0:19:57.20:0,57,1083	0/0:35,0:35:99:0,105,1972	0/0:21,0:21:60.18:0,60,1121	0/0:27,0:27:75.24:0,75,1375	0/0:16,0:16:48.15:0,48,874	0/0:6,0:6:18.06:0,18,321
chr10	57161668	.	GA	G	5310.81	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=6.056;DP=590;FS=4.188;HRun=7;HaplotypeScore=134.1092;InbreedingCoeff=0.9979;MQ=80.46;MQ0=2;MQRankSum=0.314;QD=25.29;ReadPosRankSum=0.611;VQSLOD=3.2432;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:61.97:0,62,976	1/1:3,7:10:21.05:214,21,0	0/0:40,2:23:36.07:0,36,484	0/0:39,0:31:46.53:0,47,457	0/0:28,0:28:78.24:0,78,969	1/1:0,22:22:45.10:459,45,0	1/1:1,10:11:30.07:306,30,0	1/1:0,36:36:99:1095,108,0	0/0:12,0:12:36.12:0,36,453	0/0:25,0:25:72.22:0,72,879	0/0:16,0:16:45.14:0,45,566	1/1:3,14:17:42.10:428,42,0	0/0:19,0:19:51.16:0,51,642	0/0:10,0:10:27.09:0,27,339	0/0:17,0:17:48.14:0,48,591	1/1:2,16:18:42.10:428,42,0	1/1:4,29:33:37.45:697,37,0	1/1:0,21:21:60.14:612,60,0	0/0:14,0:14:42.10:0,42,493	0/0:28,0:28:78.24:0,78,965	0/0:16,0:16:39.11:0,39,479	1/1:0,12:12:36.08:367,36,0	1/1:3,18:21:51.12:520,51,0	1/1:2,7:9:18.04:184,18,0	0/0:23,0:23:63.19:0,63,770	0/0:20,0:20:51.16:0,51,639	0/0:30,0:30:81.26:0,81,1018	0/0:11,0:11:33.11:0,33,415
chr10	57162476	.	A	AG	8562.07	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=12.415;DP=632;FS=6.575;HRun=3;HaplotypeScore=102.4426;InbreedingCoeff=0.9997;MQ=90.75;MQ0=0;MQRankSum=-2.037;QD=36.13;ReadPosRankSum=2.306;VQSLOD=4.8701;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,159,1905	0/0:9,0:9:24.07:0,24,288	0/0:27,0:27:75.17:0,75,860	0/0:25,0:25:63.15:0,63,719	0/0:21,0:21:57.17:0,57,684	0/0:27,0:27:78.24:0,78,936	0/0:23,0:23:62.39:0,62,714	0/0:14,0:14:39.10:0,39,447	1/1:0,17:17:45.15:630,45,0	1/1:2,28:30:81.27:1131,81,0	1/1:1,14:15:39.13:546,39,0	0/0:25,0:25:75.22:0,75,889	0/0:20,0:20:57.17:0,57,684	0/0:24,0:24:72.22:0,72,863	1/1:0,26:26:57.66:798,58,0	0/0:23,0:23:69.20:0,69,819	0/0:29,0:29:87.23:0,87,1019	0/0:14,0:14:40.37:0,40,470	1/1:1,12:13:36.09:484,36,0	1/1:4,16:20:45.08:593,45,0	1/1:1,26:27:72.24:1008,72,0	0/0:24,0:24:69.12:0,69,790	0/0:18,0:18:51.14:0,51,600	0/0:18,0:18:54.16:0,54,638	1/1:0,24:24:69.23:956,69,0	1/1:3,19:22:57.17:778,57,0	1/1:1,26:27:75.25:1050,75,0	1/1:0,16:16:42.14:588,42,0
chr10	57162887	.	G	GTAC	19099.66	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-8.518;DP=558;FS=2.554;HRun=0;HaplotypeScore=114.0225;InbreedingCoeff=0.9863;MQ=78.42;MQ0=2;MQRankSum=-7.168;QD=46.36;ReadPosRankSum=3.698;VQSLOD=6.5146;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:35:84.26:0,84,1366	1/1:1,5:6:12.04:267,12,0	0/0:33,0:23:60.03:0,60,878	0/0:36,0:26:58.04:0,58,815	0/0:13,0:13:29.99:0,30,465	1/1:2,25:27:69.10:1538,69,0	1/1:5,18:23:48.07:1067,48,0	1/1:4,18:24:63.02:1243,63,0	1/1:1,19:20:42.14:934,42,0	1/1:4,14:18:51.15:1069,51,0	1/1:3,5:8:11.92:267,12,0	1/1:2,14:16:30.09:669,30,0	0/0:11,0:11:30.10:0,30,490	0/0:17,0:17:51.17:0,51,832	1/1:1,20:21:57.16:1269,57,0	1/1:6,14:21:39.13:868,39,0	1/1:3,18:21:51.18:1130,51,0	1/1:3,11:14:33.11:736,33,0	1/1:15,9:22:33.11:699,33,0	1/1:1,21:22:54.19:1203,54,0	1/1:8,17:25:45.15:974,45,0	1/1:8,9:15:27.09:602,27,0	1/1:1,14:16:39.13:869,39,0	1/1:3,15:18:26.68:601,27,0	1/1:8,18:26:39.10:870,39,0	1/1:3,12:15:33.09:692,33,0	1/1:4,15:19:42.14:930,42,0	1/1:0,10:10:27.09:602,27,0
chr10	57162896	.	TTC	T	436.19	PASS	AB=1.000;AC=18;AF=0.375;AN=48;BaseQRankSum=-0.860;DP=570;FS=19.056;HRun=0;HaplotypeScore=176.6195;InbreedingCoeff=0.3767;MQ=62.66;MQ0=4;MQRankSum=2.979;QD=2.46;ReadPosRankSum=2.291;VQSLOD=1.5673;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:31,3:33:17.24:139,17,0	0/0:5,0:5:2.98:0,3,22	./.	0/0:27,0:17:0.10:0,0,0	1/1:12,1:17:5.85:46,6,0	0/0:26,0:26:0.47:0,0,1	0/0:24,0:24:2.94:0,3,18	0/0:36,0:35:4.78:0,5,39	0/0:19,0:19:5.88:0,6,27	0/1:24,0:23:19.90:20,0,84	1/1:9,0:9:0.30:1,0,0	0/0:12,0:11:1.70:0,2,36	1/1:11,1:12:13.88:105,14,0	1/1:14,3:17:20.23:193,20,0	0/0:23,0:23:0:0,0,0	0/1:15,0:15:7.76:8,0,19	0/0:20,0:20:2.35:0,2,21	1/1:14,0:14:6.01:25,6,0	0/0:29,0:27:3.61:0,4,20	0/0:23,0:23:0.22:0,0,1	1/1:19,0:19:0.47:1,0,0	./.	./.	./.	0/0:28,0:28:11.73:0,12,66	1/1:16,0:16:5.02:30,5,0	0/0:18,0:18:3.01:0,3,34	0/0:17,0:17:4.24:0,4,28
chr10	57162943	.	TCATC	T	9514.91	PASS	AB=0.988;AC=48;AF=0.857;AN=56;BaseQRankSum=2.188;DP=560;FS=9.509;HRun=0;HaplotypeScore=144.8473;InbreedingCoeff=0.3259;MQ=53.93;MQ0=28;MQRankSum=-3.635;QD=19.74;ReadPosRankSum=0.284;VQSLOD=4.1368;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:31,0:30:76.42:76,0,909	1/1:7,0:7:20.68:164,21,0	0/0:66,0:16:29.36:0,29,489	0/1:82,0:21:15.29:15,0,358	0/0:11,1:12:6.78:0,7,202	1/1:7,5:12:15.33:289,15,0	1/1:16,2:18:23.61:381,24,0	1/1:15,0:15:43.83:330,44,0	1/1:17,1:19:40.97:538,41,0	1/1:15,4:21:62.20:963,62,0	1/1:1,6:7:10.59:151,11,0	1/1:11,3:13:24.08:467,24,0	0/1:18,1:19:99:112,0,587	0/1:29,0:29:31.07:31,0,1187	1/1:13,4:18:36.09:652,36,0	1/1:10,3:13:33.11:599,33,0	1/1:8,1:9:15.94:274,16,0	1/1:10,2:12:33.09:577,33,0	1/1:6,3:7:18.95:308,19,0	1/1:10,3:15:30.57:469,31,0	1/1:17,2:17:14.84:288,15,0	1/1:12,4:14:21.07:405,21,0	1/1:4,5:9:6.02:117,6,0	1/1:13,3:15:13.29:239,13,0	1/1:11,6:21:32.92:400,33,0	1/1:13,3:17:51.10:832,51,0	1/1:15,3:20:49.67:813,50,0	1/1:1,0:10:2.98:22,3,0
chr10	57162947	.	C	CT	3842.73	PASS	AB=0.989;AC=39;AF=0.696;AN=56;BaseQRankSum=3.808;DP=591;FS=22.245;HRun=1;HaplotypeScore=154.9501;InbreedingCoeff=0.7856;MQ=59.90;MQ0=28;MQRankSum=0.428;QD=9.73;ReadPosRankSum=1.041;VQSLOD=0.0739;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,1:30:23.97:0,24,640	0/0:6,1:7:3.06:0,3,66	0/0:75,0:22:20.04:0,20,376	0/1:87,1:26:11.80:12,0,304	0/0:12,0:12:17.69:0,18,195	1/1:10,1:11:17.15:116,17,0	1/1:16,0:16:23.06:143,23,0	0/0:15,0:15:6.12:0,6,163	1/1:17,2:18:24.17:205,24,0	1/1:22,5:25:43.56:438,44,0	1/1:10,0:10:11.62:150,12,0	1/1:16,0:15:28.68:158,29,0	0/0:17,0:17:4.07:0,4,439	0/0:30,0:30:55.61:0,56,944	1/1:21,0:21:26.73:346,27,0	1/1:12,0:12:26.47:149,26,0	1/1:8,3:11:20.19:114,20,0	1/1:13,1:14:21.20:158,21,0	1/1:10,0:8:20.23:156,20,0	1/1:15,1:16:28.10:259,28,0	1/1:17,3:18:16.18:112,16,0	1/1:13,0:12:20.01:113,20,0	1/1:8,0:8:8.72:89,9,0	1/1:15,0:14:10.75:56,11,0	1/1:24,3:26:26.61:342,27,0	1/1:20,0:20:39.38:330,39,0	1/1:20,1:21:49.98:396,50,0	0/0:7,3:10:2.84:0,3,14
chr10	57163870	.	C	CTGTGTG	12807.31	PASS	AB=0.778;AC=28;AF=0.500;AN=56;BaseQRankSum=-5.317;DP=778;FS=2.993;HRun=0;HaplotypeScore=177.7013;InbreedingCoeff=0.8093;MQ=71.10;MQ0=0;MQRankSum=-10.139;QD=33.97;ReadPosRankSum=-4.513;VQSLOD=3.8961;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:57:27.65:0,28,252	1/1:10,0:10:21.34:95,21,0	0/0:18,0:16:2.91:0,3,191	0/1:29,0:27:66.51:67,0,212	0/1:5,0:25:24.14:24,0,74	0/0:25,0:25:60.20:0,60,1239	0/0:25,0:25:63.22:0,63,1325	1/1:31,0:31:35.18:316,35,0	1/1:10,20:31:51.18:1659,51,0	1/1:9,19:30:75.23:2155,75,0	1/1:11,8:21:9.03:274,9,0	0/0:32,0:32:84.29:0,84,1781	0/0:27,0:27:69.22:0,69,1437	0/0:34,0:36:87.28:0,87,1766	1/1:17,21:41:47.95:1494,48,0	0/0:24,0:25:57.18:0,57,1159	0/0:33,0:34:99:0,99,1977	0/0:34,0:34:87.30:0,87,1844	1/1:15,5:20:24.08:667,24,0	1/1:6,13:19:24.08:806,24,0	1/1:11,3:24:21.54:432,22,0	0/0:24,0:25:54.18:0,54,1083	0/0:22,0:23:45.14:0,45,937	0/0:39,0:40:99:0,105,2220	1/1:7,21:31:33.11:966,33,0	1/1:10,24:36:90.28:2421,90,0	1/1:11,14:26:42.14:1229,42,0	1/1:1,2:3:6.02:202,6,0
chr10	57163884	.	G	GT	782.35	PASS	AB=0.938;AC=14;AF=0.250;AN=56;BaseQRankSum=17.856;DP=677;FS=0.318;HRun=1;HaplotypeScore=130.1263;InbreedingCoeff=-0.1100;MQ=62.68;MQ0=1;MQRankSum=-7.681;QD=2.42;ReadPosRankSum=3.131;VQSLOD=-0.4261;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:62,0:62:78.73:79,0,383	0/1:3,7:10:2.81:168,0,3	0/0:9,0:7:18.03:0,18,205	0/1:18,0:17:0.08:0,0,314	0/1:21,0:21:65.69:66,0,66	0/0:20,0:20:60.19:0,60,822	0/0:26,0:26:75.21:0,75,1021	0/1:17,16:33:46:463,0,46	0/1:24,0:24:25.55:26,0,141	0/1:29,0:29:18.44:18,0,336	0/1:13,0:13:7.46:7,0,66	0/0:29,0:29:87.29:0,87,1214	0/0:28,0:28:78.26:0,78,1083	0/0:33,0:33:96.18:0,96,1285	0/1:33,0:33:13.95:14,0,198	0/0:26,0:26:75.17:0,75,997	0/0:36,0:36:99:0,105,1423	0/0:30,0:30:90.30:0,90,1255	0/0:8,0:8:3.07:0,3,146	1/1:13,0:13:12.96:35,13,0	0/0:22,0:22:0.56:0,1,158	0/0:19,0:19:57.11:0,57,756	0/0:21,0:21:57.18:0,57,775	0/0:41,0:41:99:0,120,1633	0/1:24,0:24:16.13:16,0,95	0/1:24,0:24:20.97:21,0,226	0/1:17,0:17:20.43:20,0,94	0/0:6,0:6:6.71:0,7,152
chr10	57163885	.	G	GT	503.11	PASS	AB=0.667;AC=3;AF=0.054;AN=56;BaseQRankSum=3.428;DP=675;FS=2.405;HRun=0;HaplotypeScore=130.7889;InbreedingCoeff=0.6663;MQ=63.33;MQ0=1;MQRankSum=1.001;QD=12.27;ReadPosRankSum=-2.660;VQSLOD=4.0169;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:63,0:63:99:0,165,1518	1/1:2,7:9:13.51:186,14,0	0/0:9,0:7:18.03:0,18,207	0/0:20,0:18:32.80:0,33,380	0/0:20,0:20:53.51:0,54,440	0/0:20,0:20:60.18:0,60,816	0/0:27,0:27:78.17:0,78,1045	0/1:16,16:32:7.38:418,0,7	0/0:25,0:25:60.71:0,61,448	0/0:28,0:28:69.22:0,69,730	0/0:13,0:13:10.45:0,10,142	0/0:29,0:29:87.27:0,87,1197	0/0:28,0:28:81.22:0,81,1092	0/0:33,0:33:96.30:0,96,1304	0/0:33,0:33:64.73:0,65,509	0/0:24,0:24:72.24:0,72,999	0/0:36,0:36:99:0,105,1442	0/0:30,0:30:90.27:0,90,1232	0/0:10,0:10:19.96:0,20,209	0/0:13,0:13:22.14:0,22,116	0/0:21,0:21:33.29:0,33,318	0/0:18,0:18:54.18:0,54,747	0/0:21,0:21:57.18:0,57,782	0/0:40,0:40:99:0,120,1658	0/0:24,0:24:41.41:0,41,332	0/0:24,0:24:68.78:0,69,593	0/0:18,0:18:46.85:0,47,353	0/0:6,0:6:17.89:0,18,203
chr10	57164762	.	C	CA	2963.66	PASS	AB=0.797;AC=26;AF=0.464;AN=56;BaseQRankSum=-2.003;DP=655;FS=0.000;HRun=14;HaplotypeScore=99.2610;InbreedingCoeff=0.2913;MQ=78.68;MQ0=3;MQRankSum=-2.085;QD=7.04;ReadPosRankSum=-1.356;VQSLOD=2.4510;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:13,5:41:51.24:372,51,0	0/0:3,0:13:16.93:0,17,56	0/0:28,0:21:18.54:0,19,91	0/0:27,0:19:1.54:0,2,8	1/1:12,3:27:46.37:275,46,0	0/0:18,0:20:41.95:0,42,260	0/0:19,1:21:17:0,17,229	0/0:10,0:35:51.37:0,51,147	0/1:16,6:25:29.06:208,0,29	0/1:16,12:29:6.93:288,0,7	0/1:11,13:24:2.58:220,0,3	0/0:25,0:25:28.35:0,28,185	0/1:20,1:23:18.10:18,0,143	0/1:19,1:22:5.82:6,0,127	0/1:8,7:15:3.77:91,0,4	0/0:22,0:22:47.15:0,47,305	0/1:16,1:19:16.57:17,0,129	0/0:21,0:21:39.15:0,39,252	1/1:6,13:19:41.53:327,42,0	1/1:11,9:23:27.68:189,28,0	1/1:6,8:15:2.59:128,3,0	0/1:17,3:21:5.14:5,0,206	0/1:15,2:18:27.91:28,0,91	0/0:19,1:21:13.94:0,14,206	0/1:5,13:20:32.81:174,0,33	1/1:23,8:31:22.78:364,23,0	1/1:10,16:28:10.37:299,10,0	1/1:10,7:19:4.41:141,4,0
chr10	57165232	.	G	GC	2653.61	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-9.813;DP=762;FS=0.960;HRun=5;HaplotypeScore=73.6712;InbreedingCoeff=0.9936;MQ=82.74;MQ0=0;MQRankSum=-4.322;QD=34.46;ReadPosRankSum=2.714;VQSLOD=3.8514;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,50:53:99:1929,147,0	0/0:8,0:8:21.05:0,21,226	0/0:24,0:24:57.08:0,57,575	0/0:19,0:19:18.44:0,18,359	1/1:1,23:24:66.15:846,66,0	0/0:25,0:25:69.17:0,69,741	0/0:27,0:27:75.15:0,75,787	0/0:28,0:28:78.18:0,78,827	0/0:36,0:36:99:0,105,1122	0/0:28,0:28:75.09:0,75,799	0/0:29,0:29:84.20:0,84,894	0/0:30,0:30:90.21:0,90,959	0/0:26,0:26:75.17:0,75,797	0/0:29,0:29:84.19:0,84,893	0/0:31,0:30:90.16:0,90,953	0/0:21,0:21:63.16:0,63,677	0/0:35,0:35:99:0,102,1096	0/0:24,0:24:66.14:0,66,698	0/0:28,0:28:78.16:0,78,816	0/0:19,0:19:54.14:0,54,580	0/0:44,0:44:99:0,126,1354	0/0:28,0:28:66.16:0,66,709	0/0:20,0:20:51.12:0,51,541	0/0:32,0:32:93.13:0,93,966	0/0:20,0:20:57.14:0,57,613	0/0:34,0:34:99:0,99,1064	0/0:31,0:31:93.23:0,93,999	0/0:9,0:9:27.07:0,27,290
chr10	57165635	.	CCCTG	C	1075.91	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.282;DP=608;FS=7.684;HRun=0;HaplotypeScore=97.6065;InbreedingCoeff=0.9501;MQ=76.84;MQ0=0;MQRankSum=-3.168;QD=31.64;ReadPosRankSum=-0.018;VQSLOD=3.2656;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,28:28:48.16:1002,48,0	0/0:5,0:5:15.05:0,15,424	0/0:16,0:16:13.92:0,14,1101	0/0:15,0:15:39.13:0,39,993	1/1:0,6:6:9.03:188,9,0	0/0:11,0:11:33.11:0,33,955	0/0:26,0:26:78.27:0,78,2244	0/0:27,0:27:78.25:0,78,2164	0/0:29,0:29:87.30:0,87,2437	0/0:14,0:14:42.14:0,42,1123	0/0:10,0:10:27.08:0,27,721	0/0:25,0:25:75.26:0,75,2062	0/0:32,0:32:96.33:0,96,2770	0/0:22,0:22:66.23:0,66,1912	0/0:18,0:18:54.19:0,54,1513	0/0:20,0:20:60.21:0,60,1675	0/0:32,0:32:96.33:0,96,2629	0/0:31,0:31:93.32:0,93,2636	0/0:24,0:24:72.23:0,72,1904	0/0:17,0:17:51.16:0,51,1416	0/0:61,0:61:99:0,184,5053	0/0:11,0:11:33.11:0,33,956	0/0:17,0:17:48.16:0,48,1316	0/0:41,0:41:99:0,120,3423	0/0:25,0:25:72.24:0,72,1974	0/0:15,0:15:45.15:0,45,1276	0/0:18,0:18:54.19:0,54,1522	0/0:12,0:12:36.12:0,36,1027
chr10	57166484	.	TC	T	5073.88	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=9.014;DP=574;FS=10.873;HRun=7;HaplotypeScore=65.2087;InbreedingCoeff=0.9930;MQ=75.35;MQ0=2;MQRankSum=3.316;QD=24.63;ReadPosRankSum=2.849;VQSLOD=5.0182;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:75.20:0,75,911	0/0:8,0:8:18.04:0,18,213	0/0:17,0:14:12.10:0,12,209	0/0:33,0:28:52.57:0,53,517	0/0:23,0:23:69.21:0,69,855	1/1:1,14:15:35.92:366,36,0	1/1:2,26:28:66.15:673,66,0	0/0:26,0:27:59.17:0,59,694	0/0:14,0:14:39.11:0,39,476	0/0:15,0:15:30.09:0,30,363	0/0:11,0:11:21.05:0,21,250	1/1:1,22:23:60.08:612,60,0	0/0:10,0:10:27.08:0,27,334	0/0:19,0:19:54.17:0,54,679	0/0:16,0:16:42.11:0,42,514	1/1:0,19:19:48.11:490,48,0	1/1:5,30:35:84.18:854,84,0	1/1:3,24:27:60.13:610,60,0	0/0:18,0:18:54.17:0,54,679	0/0:15,0:15:40.66:0,41,471	0/0:33,0:33:84.26:0,84,1043	1/1:1,16:17:48.11:489,48,0	1/1:1,10:11:30.07:306,30,0	1/1:6,25:31:66.14:673,66,0	0/0:21,0:21:63.19:0,63,781	0/0:23,0:23:66.18:0,66,792	0/0:21,0:20:63.19:0,63,779	0/0:15,0:15:35.98:0,36,424
chr10	57168944	.	T	TTG	4842.77	PASS	AB=0.774;AC=25;AF=0.446;AN=56;BaseQRankSum=-6.372;DP=726;FS=3.081;HRun=0;HaplotypeScore=131.2336;InbreedingCoeff=0.3009;MQ=67.47;MQ0=10;MQRankSum=1.557;QD=9.90;ReadPosRankSum=-0.910;VQSLOD=4.7056;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:32,1:34:1.73:7,2,0	0/0:7,0:7:10.71:0,11,44	0/1:36,0:22:4.97:5,0,108	0/0:32,0:15:5.97:0,6,53	0/1:3,0:26:0.01:0,0,0	0/0:23,0:23:17.95:0,18,241	0/0:24,0:24:28:0,28,177	1/1:24,0:23:15.86:185,16,0	0/1:9,14:22:11.21:339,0,11	1/1:12,14:26:25.95:484,26,0	1/1:8,3:10:15:184,15,0	0/1:21,0:21:42.17:42,0,165	0/0:24,0:23:52.59:0,53,572	0/0:13,0:16:41.57:0,42,420	0/1:20,18:39:3.87:685,0,4	0/0:15,0:15:21.01:0,21,137	0/0:38,0:38:76.11:0,76,563	0/0:22,0:22:48.90:0,49,352	1/1:18,9:27:15.35:401,15,0	0/1:7,11:18:0.50:246,0,0	1/1:20,35:55:61.73:968,62,0	0/1:24,0:23:29.88:30,0,218	0/1:25,0:25:3.72:4,0,205	0/0:36,0:36:50.41:0,50,367	0/1:15,12:27:13.74:297,0,14	1/1:11,20:31:24.25:523,24,0	0/1:12,9:20:33.10:233,0,33	0/1:10,8:19:24.78:208,0,25
chr10	57168966	.	GTC	G	4073.14	PASS	AB=0.964;AC=34;AF=0.607;AN=56;BaseQRankSum=-9.071;DP=710;FS=2.108;HRun=0;HaplotypeScore=133.6388;InbreedingCoeff=-0.2287;MQ=55.94;MQ0=19;MQRankSum=0.802;QD=6.44;ReadPosRankSum=-12.245;VQSLOD=-0.1780;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:29,3:32:25.35:214,25,0	1/1:1,6:7:12.04:183,12,0	0/1:19,0:10:29.99:30,0,101	0/0:31,0:14:9.49:0,9,181	1/1:28,0:28:15.38:117,15,0	0/1:21,2:23:99:123,0,203	0/1:22,2:24:99:226,0,112	1/1:20,3:18:46.17:402,46,0	0/1:27,0:25:27.77:118,0,28	1/1:25,0:24:24.80:299,25,0	1/1:10,0:9:11.97:114,12,0	0/1:20,1:21:99:180,0,130	0/0:27,0:26:44.42:0,44,974	0/0:19,0:19:15.33:0,15,641	0/1:35,0:35:53.26:114,0,53	0/1:12,2:14:97.09:122,0,97	0/1:37,1:38:98.72:99,0,472	0/1:23,0:23:53.08:53,0,259	1/1:24,0:20:6.66:128,7,0	0/1:13,0:12:14.42:52,0,14	1/1:52,2:53:13.53:199,14,0	0/1:25,1:25:99:125,0,207	0/1:28,2:30:99:307,0,154	0/1:41,2:43:99:194,0,268	0/1:20,0:20:31.15:76,0,31	1/1:28,0:28:17.30:253,17,0	0/1:24,2:26:17.88:252,0,18	0/1:19,0:19:31.56:93,0,32
chr10	57169058	.	CTGTGTGTGTGTGTGTG	C	185.95	PASS	AB=0.871;AC=9;AF=0.161;AN=56;BaseQRankSum=5.139;DP=689;FS=9.812;HRun=0;HaplotypeScore=322.6154;InbreedingCoeff=0.2688;MQ=53.91;MQ0=20;MQRankSum=-3.049;QD=1.22;ReadPosRankSum=-3.226;VQSLOD=0.4487;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:24,14:37:0.40:0,0,10	1/1:5,0:6:2.99:23,3,0	0/0:35,0:20:3.01:0,3,45	0/0:39,0:28:12.02:0,12,266	0/0:6,1:7:3.48:0,3,70	0/0:28,0:27:34.05:0,34,1180	0/0:27,0:28:29.10:0,29,818	1/1:23,0:29:17.67:219,18,0	0/0:17,0:17:20.96:0,21,268	0/1:24,0:26:8.06:8,0,540	0/0:23,0:24:9.66:0,10,111	0/0:19,0:18:21.54:0,22,659	0/0:25,0:23:43.39:0,43,1955	0/0:17,0:17:33.58:0,34,1919	0/0:24,0:27:15.07:0,15,309	0/0:18,0:18:24.08:0,24,1122	0/0:34,0:34:53.21:0,53,1764	0/0:17,0:17:39.05:0,39,986	0/0:26,0:25:33.04:0,33,361	0/0:22,0:21:20.76:0,21,319	0/0:33,0:29:33.05:0,33,757	0/0:19,0:18:27.08:0,27,931	0/0:18,0:18:18.04:0,18,505	0/0:48,0:45:70.91:0,71,2692	0/1:15,0:19:29.98:30,0,308	0/0:30,0:30:53.96:0,54,743	0/1:17,0:19:15.80:16,0,319	0/1:10,0:7:14.30:22,0,14
chr10	57169089	.	TGTGTGTGTGTGAGAGAGA	T	2661.54	PASS	AB=0.972;AC=16;AF=0.296;AN=54;BaseQRankSum=0.107;DP=586;FS=24.801;HRun=0;HaplotypeScore=296.4240;InbreedingCoeff=-0.0755;MQ=45.55;MQ0=26;MQRankSum=-0.257;QD=8.34;ReadPosRankSum=1.159;VQSLOD=0.4977;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:26:8.26:0,8,135	0/1:8,0:6:0:0,0,0	./.	0/0:5,0:1:3.01:0,3,91	0/0:7,0:7:9.03:0,9,265	0/1:26,0:23:4.31:4,0,889	0/1:21,0:19:24.78:25,0,586	0/0:16,0:12:2.11:0,2,83	1/1:16,0:14:7.24:215,7,0	0/1:26,0:25:83.12:633,0,83	0/1:27,0:27:26.49:29,0,26	0/0:15,0:14:25.41:0,25,615	0/0:22,0:21:55.53:0,56,1972	0/0:21,0:19:43.07:0,43,1729	0/1:31,0:31:24.65:316,0,25	0/0:17,0:17:37.46:0,37,1166	0/0:27,0:26:66.86:0,67,1848	0/0:17,0:17:37.94:0,38,907	0/1:21,0:18:99:263,0,174	0/1:18,18:34:44.33:44,0,169	0/1:27,0:21:71.39:71,0,131	0/0:30,0:28:38.95:0,39,1323	0/0:15,0:15:23.27:0,23,384	0/0:45,0:41:80.44:0,80,2358	0/1:24,0:23:41.81:339,0,42	0/1:24,0:24:99:262,0,357	0/1:22,0:22:99:437,0,117	1/1:10,0:4:9.03:176,9,0
chr10	57169091	.	TGTGTGTGTGAGAGA	T	5535.45	PASS	AB=0.940;AC=20;AF=0.385;AN=52;BaseQRankSum=-6.010;DP=584;FS=8.540;HRun=0;HaplotypeScore=255.3869;InbreedingCoeff=0.3082;MQ=45.39;MQ0=27;MQRankSum=0.546;QD=17.30;ReadPosRankSum=1.446;VQSLOD=2.4604;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:27:10.66:0,11,153	./.	./.	0/0:4,0:1:3.01:0,3,67	0/0:8,0:8:8.99:0,9,188	0/1:26,0:23:33.21:33,0,510	0/1:20,0:18:20.38:20,0,344	0/0:18,0:14:15.73:0,16,222	1/1:16,0:14:23.68:435,24,0	1/1:26,0:25:23.77:1049,24,0	0/1:6,20:26:9.19:73,0,9	0/0:14,0:13:19.78:0,20,393	0/0:26,0:25:62.92:0,63,1683	0/0:22,0:20:43.09:0,43,1315	1/1:29,1:30:38.34:868,38,0	0/0:17,0:17:34.06:0,34,840	0/0:27,0:26:22.69:0,23,1074	0/0:15,0:15:38.79:0,39,626	0/1:23,0:20:80.29:566,0,80	0/1:35,0:33:38.46:170,0,38	1/1:26,0:20:16.21:238,16,0	0/0:29,0:27:37.26:0,37,901	0/1:16,0:16:27.68:28,0,158	0/0:45,0:41:66.97:0,67,1489	1/1:22,0:22:26.23:520,26,0	0/1:21,0:21:62.12:578,0,62	0/1:21,0:22:41.06:756,0,41	1/1:10,0:3:9.03:202,9,0
chr10	57169099	.	TGA	T	920.38	PASS	AB=0.992;AC=24;AF=0.462;AN=52;BaseQRankSum=3.286;DP=591;FS=9.424;HRun=0;HaplotypeScore=195.0459;InbreedingCoeff=0.5567;MQ=45.08;MQ0=29;MQRankSum=1.513;QD=3.12;ReadPosRankSum=1.848;VQSLOD=2.0645;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:35:17.45:0,17,135	0/0:12,0:10:8.99:0,9,76	./.	./.	0/1:10,0:10:16.31:16,0,37	0/0:26,0:23:14.71:0,15,125	0/0:19,0:17:17.98:0,18,152	0/0:27,0:22:30.91:0,31,206	1/1:14,0:14:20.58:123,21,0	1/1:24,1:24:34.93:206,35,0	1/1:23,0:24:2.92:17,3,0	0/0:17,0:16:9.32:0,9,61	0/0:26,0:26:16.47:0,16,196	0/1:21,0:19:4.23:4,0,88	1/1:27,1:28:20.51:121,21,0	0/0:17,0:17:14.95:0,15,123	0/0:25,0:24:27.44:0,27,228	0/0:12,0:12:1.78:0,2,105	1/1:21,2:20:7.32:97,7,0	0/1:31,0:30:8.11:26,0,8	1/1:20,1:15:17.41:113,17,0	0/0:29,0:27:5.44:0,5,159	0/1:20,0:20:8.44:8,0,43	0/0:44,0:40:42.79:0,43,375	1/1:21,1:21:14.68:88,15,0	1/1:21,1:22:28.06:180,28,0	1/1:20,0:21:1.62:88,2,0	1/1:8,0:2:2.94:18,3,0
chr10	57170769	.	C	CTCTCTCTCTCTT	2809.64	PASS	AB=1.000;AC=22;AF=0.393;AN=56;BaseQRankSum=5.522;DP=466;FS=1.636;HRun=0;HaplotypeScore=157.6504;InbreedingCoeff=-0.3332;MQ=58.28;MQ0=18;MQRankSum=-2.165;QD=8.59;ReadPosRankSum=1.728;VQSLOD=2.5377;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:17:29.79:266,30,0	0/0:2,0:2:0.47:0,0,1	0/0:26,0:13:4.48:0,4,142	0/0:41,0:17:8.92:0,9,160	1/1:7,16:23:32.61:219,33,0	0/1:16,0:14:20.74:283,0,21	0/1:15,0:15:74.13:322,0,74	0/1:26,0:21:49.82:50,0,299	0/0:20,0:20:12.09:0,12,87	0/0:14,0:12:26.83:0,27,209	0/1:13,0:13:54.71:55,0,62	0/1:10,0:10:13.86:60,0,14	0/0:6,0:6:8.99:0,9,74	0/0:12,0:12:30.03:0,30,690	0/1:19,0:17:81.79:100,0,82	0/1:16,0:15:59.84:138,0,60	0/1:14,0:13:84.77:137,0,85	0/1:16,0:16:99:422,0,114	0/1:15,0:12:99:210,0,153	0/1:19,0:17:91.80:159,0,92	0/1:11,0:11:0.25:0,0,0	0/1:16,0:16:83.67:164,0,84	0/1:15,0:15:39.91:79,0,40	0/1:18,0:18:55.16:55,0,89	0/0:18,0:17:20.11:0,20,156	0/1:17,0:15:99:137,0,216	0/1:16,0:16:61.73:62,0,128	0/1:14,0:13:51.98:52,0,69
chr10	57170855	.	AATT	A	1377.02	PASS	AC=4;AF=0.074;AN=54;BaseQRankSum=7.351;DP=256;FS=0.734;HRun=0;HaplotypeScore=41.1019;InbreedingCoeff=0.6877;MQ=77.79;MQ0=1;MQRankSum=-2.693;QD=33.59;ReadPosRankSum=-1.911;VQSLOD=3.2413;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:9:18.06:0,18,334	1/1:0,9:9:18.06:265,18,0	0/0:8,0:6:10.23:0,10,215	0/0:14,0:11:5.76:0,6,174	0/0:17,0:17:51.18:0,51,1100	0/0:17,0:17:51.18:0,51,1114	0/0:2,0:2:6.02:0,6,131	1/1:4,28:32:78.27:1230,78,0	0/0:6,0:6:15.05:0,15,314	0/0:4,0:4:9.03:0,9,161	0/0:5,0:5:15.05:0,15,292	0/0:3,0:3:9.03:0,9,197	0/0:4,0:4:9.02:0,9,156	0/0:5,0:5:9.03:0,9,197	0/0:5,0:5:15.05:0,15,326	0/0:6,0:6:18.06:0,18,367	0/0:20,0:20:60.20:0,60,1244	0/0:17,0:17:51.18:0,51,1113	0/0:12,0:12:30.10:0,30,628	0/0:7,0:7:21.07:0,21,459	./.	0/0:1,0:1:3.01:0,3,65	0/0:4,0:4:12.04:0,12,242	0/0:4,0:4:12.04:0,12,262	0/0:11,0:11:30.10:0,30,623	0/0:10,0:10:24.07:0,24,486	0/0:13,0:13:27.09:0,27,589	0/0:10,0:10:27.09:0,27,543
chr10	57171622	.	TGTAAA	T	1816.98	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.913;DP=682;FS=0.000;HRun=0;HaplotypeScore=127.9324;InbreedingCoeff=0.9992;MQ=81.89;MQ0=0;MQRankSum=-8.888;QD=46.59;ReadPosRankSum=-0.251;VQSLOD=3.2941;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,120,3548	1/1:1,11:12:33.11:669,33,0	0/0:20,0:20:51.17:0,51,1418	0/0:23,0:23:60.20:0,60,1534	0/0:23,0:23:66.23:0,66,2000	0/0:16,0:16:48.14:0,48,1323	0/0:26,0:26:78.22:0,78,2164	1/1:7,20:26:63.22:1269,63,0	0/0:15,0:15:42.14:0,42,1273	0/0:32,0:32:87.28:0,87,2414	0/0:10,0:10:27.09:0,27,819	0/0:26,0:26:75.25:0,75,2185	0/0:18,0:18:45.15:0,45,1363	0/0:17,0:17:48.16:0,48,1437	0/0:25,0:25:75.26:0,75,2201	0/0:23,0:23:63.22:0,63,1900	0/0:33,0:33:87.30:0,87,2585	0/0:44,0:43:99:0,120,3541	0/0:29,0:29:75.24:0,75,2141	0/0:21,0:21:63.22:0,63,1869	0/0:40,0:40:99:0,99,2864	0/0:24,0:24:57.18:0,57,1650	0/0:20,0:20:51.13:0,51,1376	0/0:34,0:34:99:0,99,3002	0/0:22,0:22:63.19:0,63,1726	0/0:27,0:27:78.27:0,78,2355	0/0:23,0:23:63.20:0,63,1813	0/0:11,0:11:33.11:0,33,983
chr10	57174054	.	T	TAC	1184.19	PASS	AB=0.810;AC=24;AF=0.480;AN=50;BaseQRankSum=-1.380;DP=609;FS=2.509;HRun=0;HaplotypeScore=106.4537;InbreedingCoeff=0.5307;MQ=62.77;MQ0=9;MQRankSum=-1.404;QD=4.45;ReadPosRankSum=-2.335;VQSLOD=2.4409;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:15.79:0,16,285	1/1:7,3:10:8.98:89,9,0	./.	./.	0/0:20,0:23:17.54:0,18,132	0/1:12,0:12:27.43:27,0,56	0/0:28,0:27:17.71:0,18,175	1/1:20,0:20:3.46:26,3,0	1/1:9,5:16:9.03:133,9,0	1/1:9,3:11:6.02:89,6,0	1/1:17,0:17:6.02:88,6,0	0/0:13,0:13:20.26:0,20,201	0/0:20,0:18:33.08:0,33,355	0/0:23,0:22:24.06:0,24,257	1/1:14,10:25:9.03:133,9,0	1/1:12,2:16:3.01:44,3,0	0/0:35,0:37:29.26:0,29,364	0/0:22,0:25:11.42:0,11,101	1/1:16,5:20:14.56:123,15,0	1/1:10,4:15:3.01:44,3,0	1/1:33,2:34:16.52:208,17,0	0/0:18,0:18:4.08:0,4,27	0/0:16,0:16:11.62:0,12,107	0/0:32,0:32:18.34:0,18,177	0/1:15,6:21:22.26:120,0,22	0/1:16,7:23:1.37:183,0,1	0/1:13,5:23:23.34:56,0,23	./.
chr10	57175602	.	TTC	T	19481.90	PASS	AB=0.987;AC=29;AF=0.518;AN=56;BaseQRankSum=-9.201;DP=1016;FS=0.483;HRun=0;HaplotypeScore=205.0782;InbreedingCoeff=0.7818;MQ=57.96;MQ0=10;MQRankSum=-1.515;QD=32.52;ReadPosRankSum=0.040;VQSLOD=5.4332;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,30:37:99:1463,105,0	0/0:13,0:13:12.43:0,12,255	0/0:39,0:23:34.19:0,34,909	0/0:32,0:27:61.72:0,62,1028	1/1:5,22:27:75.23:1095,75,0	0/0:24,0:24:68.23:0,68,617	0/1:31,0:31:25.50:26,0,456	0/1:59,0:59:32.72:33,0,949	1/1:13,33:45:99:1830,126,0	1/1:15,29:44:99:1900,129,0	1/1:4,24:28:84.24:1252,84,0	0/0:50,0:50:99:0,105,1127	0/0:34,0:34:96.13:0,96,1692	0/0:32,0:32:95.11:0,95,1720	1/1:12,43:54:99:2183,147,0	0/0:46,1:47:92.01:0,92,1137	0/0:44,0:44:56.14:0,56,969	0/1:24,1:25:33.42:33,0,472	1/1:13,26:35:99:1369,99,0	1/1:11,26:37:99:1480,102,0	1/1:21,45:66:99:2585,183,0	0/0:30,0:30:60.50:0,60,700	0/0:22,0:22:41.01:0,41,506	0/0:50,0:50:90.20:0,90,1070	1/1:4,20:24:66.21:987,66,0	1/1:14,31:44:99:1848,129,0	1/1:11,12:23:57.14:816,57,0	1/1:3,10:13:39.13:583,39,0
chr10	57175847	.	A	ATG	4004.17	PASS	AB=0.860;AC=21;AF=0.404;AN=52;BaseQRankSum=-4.008;DP=799;FS=4.332;HRun=0;HaplotypeScore=246.0006;InbreedingCoeff=0.0273;MQ=47.32;MQ0=15;MQRankSum=-1.463;QD=8.61;ReadPosRankSum=-3.483;VQSLOD=2.7897;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:30,10:42:25.48:386,0,25	1/1:9,0:9:5.96:45,6,0	./.	./.	0/1:17,4:21:34.65:164,0,35	0/0:15,0:24:12.40:0,12,58	0/1:22,0:34:12.37:21,0,12	1/1:30,0:28:2.31:176,2,0	0/1:23,4:27:98.46:235,0,98	0/1:31,9:39:22.11:684,0,22	0/1:25,5:30:14.11:169,0,14	0/0:14,0:25:15.50:0,15,71	0/0:12,0:11:12.03:0,12,134	0/0:28,0:30:33:0,33,332	0/1:14,7:21:36.65:308,0,37	0/0:7,0:16:18.91:0,19,90	0/0:18,0:27:14.09:0,14,134	0/0:19,0:25:20.80:0,21,97	0/1:26,3:20:54.61:119,0,55	1/1:21,11:33:39.12:515,39,0	0/1:59,3:58:99:173,0,176	0/0:17,0:29:6.05:0,6,28	0/0:16,0:27:12.37:0,12,57	0/0:31,0:37:10.66:0,11,52	0/1:18,4:23:12.63:250,0,13	0/1:31,8:40:97.21:407,0,97	1/1:11,4:16:21.06:294,21,0	1/1:7,1:8:5.89:60,6,0
chr10	57175898	.	C	CA	21840.26	PASS	AB=0.823;AC=54;AF=0.964;AN=56;BaseQRankSum=-3.615;DP=580;FS=9.949;HRun=0;HaplotypeScore=119.9424;InbreedingCoeff=-0.0385;MQ=67.89;MQ0=1;MQRankSum=-3.452;QD=37.66;ReadPosRankSum=2.443;VQSLOD=3.6918;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,31:31:75.26:1198,75,0	1/1:0,6:6:18.06:288,18,0	0/1:10,2:12:7.94:105,0,8	0/1:12,3:11:32.13:105,0,32	1/1:1,16:17:36.02:575,36,0	1/1:0,20:20:54.18:863,54,0	1/1:3,30:33:72.25:1150,72,0	1/1:1,21:22:66.22:1052,66,0	1/1:1,18:19:54.18:862,54,0	1/1:4,21:24:66.22:1054,66,0	1/1:0,16:16:39.13:623,39,0	1/1:0,19:19:48.16:765,48,0	1/1:1,17:18:45.15:719,45,0	1/1:0,16:16:39.13:623,39,0	1/1:0,16:16:36.12:575,36,0	1/1:2,14:16:39.12:600,39,0	1/1:0,27:26:72.25:1149,72,0	1/1:1,18:19:51.17:814,51,0	1/1:2,22:24:72.25:1150,72,0	1/1:0,21:21:36.12:575,36,0	1/1:1,37:37:93.29:1451,93,0	1/1:1,24:25:53.92:863,54,0	1/1:2,19:22:48.15:729,48,0	1/1:0,34:33:68.60:1101,69,0	1/1:3,18:21:51.15:790,51,0	1/1:0,30:30:90.31:1439,90,0	1/1:0,15:15:33.11:527,33,0	1/1:0,2:2:6.02:96,6,0
chr10	57176897	.	CTGTTGTTGTTGT	C	8440.48	PASS	AB=1.000;AC=27;AF=0.482;AN=56;BaseQRankSum=7.458;DP=463;FS=0.987;HRun=0;HaplotypeScore=169.4428;InbreedingCoeff=0.8454;MQ=73.24;MQ0=4;MQRankSum=-7.919;QD=40.58;ReadPosRankSum=2.084;VQSLOD=4.6557;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:19,9:28:51.16:1670,51,0	0/0:2,0:3:6.02:0,6,109	0/1:41,0:27:49.43:49,0,1261	0/0:41,0:31:10.57:0,11,1498	1/1:5,4:9:12.04:422,12,0	0/0:21,0:21:42.14:0,42,2200	0/0:14,0:14:30.09:0,30,1481	0/0:11,0:15:30.10:0,30,457	1/1:7,3:10:15.05:531,15,0	1/1:5,2:7:9.03:317,9,0	1/1:6,1:7:6.02:128,6,0	0/0:14,0:14:33.11:0,33,1612	0/0:15,0:15:30.10:0,30,1678	0/0:16,0:16:39.12:0,39,2138	1/1:9,6:15:21.07:740,21,0	0/0:17,0:17:35.69:0,36,1833	0/0:32,0:32:66.23:0,66,3407	0/0:25,0:25:66.23:0,66,3336	1/1:9,4:13:15.05:531,15,0	1/1:10,6:16:24.06:653,24,0	1/1:13,3:16:18.01:317,18,0	0/0:9,0:9:21.07:0,21,939	0/0:6,0:6:12.03:0,12,560	0/0:27,0:27:64.77:0,65,3377	1/1:4,5:9:18.06:633,18,0	1/1:10,10:20:39.13:1327,39,0	1/1:4,9:13:30.10:1016,30,0	1/1:3,1:4:3.01:106,3,0
chr10	57176930	.	G	GT	6861.55	PASS	AB=0.590;AC=44;AF=0.786;AN=56;BaseQRankSum=-3.101;DP=437;FS=3.662;HRun=10;HaplotypeScore=88.8996;InbreedingCoeff=0.4920;MQ=71.23;MQ0=10;MQRankSum=-2.462;QD=20.30;ReadPosRankSum=3.140;VQSLOD=5.6719;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,22:23:51.04:520,51,0	1/1:1,1:2:6.01:63,6,0	0/0:45,0:28:41.11:0,41,313	0/0:24,0:11:2.66:0,3,39	1/1:2,13:15:18.62:278,19,0	1/1:6,12:19:29.90:295,30,0	1/1:4,6:10:12.03:127,12,0	1/1:5,14:19:20.41:389,20,0	1/1:2,7:9:18.04:190,18,0	1/1:2,7:9:24.06:252,24,0	1/1:1,4:6:17.73:135,18,0	1/1:1,7:8:15.04:160,15,0	0/0:13,0:13:32.91:0,33,262	0/0:17,0:17:35.88:0,36,289	1/1:1,15:16:42.10:441,42,0	1/1:4,9:13:18.05:192,18,0	1/1:5,26:31:24.73:627,25,0	0/1:6,19:25:35.71:423,0,36	1/1:2,10:12:8.45:291,8,0	1/1:1,12:13:38.76:390,39,0	0/1:4,6:11:14.12:53,0,14	1/1:2,9:11:2.58:175,3,0	0/1:2,7:9:0.20:171,0,0	1/1:3,20:23:7.88:494,8,0	0/1:2,5:7:28.03:118,0,28	1/1:5,12:17:41.96:406,42,0	1/1:6,15:21:26.60:458,27,0	1/1:1,8:8:21.02:212,21,0
chr10	57177097	.	AGG	A	2082.03	PASS	AC=22;AF=0.407;AN=54;BaseQRankSum=-8.632;DP=246;FS=3.858;HRun=9;HaplotypeScore=47.2699;InbreedingCoeff=0.8310;MQ=99.29;MQ0=3;MQRankSum=-1.901;QD=25.39;ReadPosRankSum=1.493;VQSLOD=2.9303;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:15:26.33:0,26,91	0/0:2,0:2:2.14:0,2,8	0/0:38,0:20:34.32:0,34,401	0/0:33,0:20:30.77:0,31,355	0/0:3,0:15:28.46:0,28,101	0/0:8,0:8:20.71:0,21,186	0/0:5,0:5:9.08:0,9,75	0/0:9,0:10:9.91:0,10,121	1/1:0,6:6:15.04:175,15,0	1/1:0,8:8:24.07:279,24,0	1/1:1,5:6:15.04:173,15,0	0/0:2,0:2:3:0,3,26	0/0:2,0:2:6.02:0,6,98	0/0:1,0:1:3.01:0,3,49	1/1:1,5:6:12.04:139,12,0	0/0:8,0:8:21.04:0,21,210	0/0:13,0:13:39.09:0,39,399	0/0:7,0:7:15.04:0,15,157	1/1:2,7:9:24.03:265,24,0	1/1:2,7:9:21.06:243,21,0	1/1:0,5:5:12.04:140,12,0	./.	0/0:3,0:3:6.01:0,6,62	0/0:1,0:1:3.01:0,3,32	1/1:2,9:11:18.05:210,18,0	1/1:1,7:8:21.06:244,21,0	1/1:0,7:7:18.05:210,18,0	1/1:1,6:7:18.05:210,18,0
chr10	57177465	.	A	AGTG	347.89	PASS	AB=0.707;AC=16;AF=0.286;AN=56;BaseQRankSum=10.448;DP=554;FS=7.151;HRun=0;HaplotypeScore=115.6107;InbreedingCoeff=-0.1353;MQ=68.23;MQ0=20;MQRankSum=-1.739;QD=1.34;ReadPosRankSum=3.447;VQSLOD=0.9962;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,102,1538	1/1:0,0:3:2.99:24,3,0	0/0:31,0:17:40.21:0,40,438	0/0:33,0:14:30.08:0,30,385	0/0:14,0:14:33.58:0,34,549	0/0:17,0:24:34.18:0,34,653	0/0:17,0:27:34.55:0,35,529	0/1:22,0:26:12.12:12,0,561	0/1:5,0:17:89.82:90,0,138	0/1:7,2:11:70.65:121,0,71	0/0:1,0:5:6.02:0,6,75	0/1:11,0:25:15.26:15,0,389	0/0:14,0:13:39.12:0,39,619	0/0:16,0:20:51.17:0,51,846	0/1:4,0:9:9.23:9,0,123	0/0:9,0:18:11.21:0,11,401	0/1:17,0:48:3.20:3,0,618	0/1:11,0:26:7.89:8,0,287	0/1:12,0:14:24.75:25,0,338	0/1:6,0:11:8.81:9,0,132	0/1:30,0:26:8.68:9,0,336	0/0:5,0:9:7.82:0,8,201	0/0:3,0:5:4.47:0,4,130	0/0:23,0:42:15.05:0,15,573	0/0:5,0:10:9.02:0,9,103	0/1:5,0:15:77.54:78,0,209	0/1:10,0:19:77.53:78,0,323	1/1:1,0:1:2.96:19,3,0
chr10	57178999	.	CCAAAAAAAAAA	C	302.29	PASS	AB=0.933;AC=11;AF=0.196;AN=56;BaseQRankSum=-0.497;DP=215;FS=0.983;HRun=0;HaplotypeScore=64.8998;InbreedingCoeff=0.2965;MQ=51.85;MQ0=7;MQRankSum=0.182;QD=3.69;ReadPosRankSum=-0.566;VQSLOD=1.3181;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,9:9:6.02:199,6,0	0/1:2,0:2:14.71:15,0,91	1/1:15,0:1:2.68:11,3,0	0/1:26,0:7:3.62:4,0,162	1/1:1,8:9:10.99:164,11,0	0/0:5,0:5:15.05:0,15,498	0/0:5,0:5:9.03:0,9,337	0/1:10,0:11:33.06:33,0,366	0/0:5,0:5:12.04:0,12,344	0/0:5,0:7:15.05:0,15,397	0/0:6,0:7:18.06:0,18,624	0/0:8,0:7:17.95:0,18,537	0/0:3,0:3:9.03:0,9,310	0/0:10,0:10:24.01:0,24,792	0/0:8,0:8:18.06:0,18,568	0/0:5,0:5:12.04:0,12,448	0/0:4,0:4:9.03:0,9,337	0/0:4,0:4:12.04:0,12,533	0/1:6,0:6:5.51:6,0,345	0/0:1,0:9:15.05:0,15,438	0/0:3,0:4:9:0,9,147	0/0:8,0:7:20.94:0,21,610	0/0:6,0:7:20.92:0,21,489	0/1:2,0:3:10.23:10,0,56	0/0:2,0:7:12.04:0,12,323	0/0:5,0:5:9.03:0,9,275	0/0:4,0:6:18.06:0,18,492	0/0:10,0:10:5.47:0,5,434
chr10	57180009	.	T	TA	1541.51	PASS	AB=0.957;AC=5;AF=0.089;AN=56;BaseQRankSum=-2.082;DP=463;FS=14.663;HRun=0;HaplotypeScore=95.1860;InbreedingCoeff=0.7184;MQ=68.30;MQ0=4;MQRankSum=-1.737;QD=22.34;ReadPosRankSum=0.647;VQSLOD=4.1079;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,26:32:58.32:1136,58,0	0/0:3,0:3:6.02:0,6,82	0/1:21,1:15:0.88:1,0,366	0/0:21,0:20:49.45:0,49,568	1/1:2,13:15:33.11:525,33,0	0/0:17,0:17:39.12:0,39,522	0/0:23,0:23:54.16:0,54,726	0/0:8,0:7:21.07:0,21,294	0/0:19,0:19:29.73:0,30,417	0/0:14,0:14:36.12:0,36,489	0/0:5,0:5:9.03:0,9,120	0/0:15,0:15:17.67:0,18,234	0/0:21,0:21:51.16:0,51,691	0/0:27,0:27:64.74:0,65,846	0/0:19,0:18:33.05:0,33,457	0/0:20,0:20:32.84:0,33,445	0/0:29,0:28:60.17:0,60,813	0/0:19,0:19:44.71:0,45,623	0/0:17,0:15:18.04:0,18,232	0/0:13,0:13:20.93:0,21,212	0/0:28,0:28:44.80:0,45,558	0/0:8,0:8:18.06:0,18,251	0/0:3,0:3:5.98:0,6,62	0/0:19,0:19:38.80:0,39,523	0/0:10,0:10:15.04:0,15,191	0/0:13,0:13:24.07:0,24,321	0/0:14,0:13:26.80:0,27,358	0/0:7,0:7:6.02:0,6,84
chr10	57180028	.	T	TCC	5541.82	PASS	AB=0.759;AC=45;AF=0.804;AN=56;BaseQRankSum=-4.584;DP=415;FS=1.235;HRun=9;HaplotypeScore=80.3531;InbreedingCoeff=0.6280;MQ=70.20;MQ0=0;MQRankSum=-1.813;QD=17.16;ReadPosRankSum=1.676;VQSLOD=3.1895;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:13,0:28:2.06:161,0,2	1/1:1,5:6:9.03:138,9,0	0/0:23,0:17:22.98:0,23,207	0/0:22,0:21:19.71:0,20,236	0/1:6,0:15:11.91:49,0,12	1/1:7,2:13:17.01:163,17,0	1/1:9,7:21:29.59:411,30,0	1/1:4,2:9:11.50:123,12,0	1/1:1,18:20:26.43:373,26,0	1/1:5,6:12:12.02:163,12,0	0/1:2,0:2:0:0,0,0	1/1:1,8:9:6.02:92,6,0	0/0:19,0:19:32.54:0,33,463	0/0:26,0:26:59.93:0,60,599	1/1:5,10:17:21.54:303,22,0	1/1:1,12:16:29.53:416,30,0	1/1:3,23:25:42.14:646,42,0	1/1:3,8:12:20.54:286,21,0	1/1:5,2:8:9.40:102,9,0	1/1:5,3:8:8.94:102,9,0	1/1:6,12:21:16.87:352,17,0	1/1:2,5:7:6.02:92,6,0	1/1:4,5:10:14.76:227,15,0	1/1:2,20:25:47.24:685,47,0	1/1:2,3:5:3.01:42,3,0	1/1:5,7:12:18.02:251,18,0	1/1:2,9:12:21.07:319,21,0	1/1:0,7:8:3.01:45,3,0
chr10	57180746	.	C	CTTTTTT	11072.91	PASS	AB=0.958;AC=51;AF=0.911;AN=56;BaseQRankSum=1.828;DP=557;FS=8.677;HRun=15;HaplotypeScore=177.5890;InbreedingCoeff=0.5116;MQ=55.84;MQ0=10;MQRankSum=-5.043;QD=20.58;ReadPosRankSum=-3.325;VQSLOD=0.8648;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:21:25.53:138,26,0	1/1:12,0:10:13.79:206,14,0	0/1:14,0:10:3.06:3,0,14	0/1:6,0:7:0:0,0,0	1/1:19,0:13:20.59:135,21,0	1/1:18,0:16:35.67:583,36,0	1/1:16,0:12:19.76:295,20,0	1/1:18,0:13:23.95:384,24,0	1/1:18,0:17:26.98:435,27,0	1/1:13,11:33:61.92:1023,62,0	1/1:19,0:18:32.94:487,33,0	1/1:20,0:15:21.18:229,21,0	0/0:19,0:19:34.94:0,35,481	0/1:28,0:28:24.43:24,0,299	1/1:22,0:21:39.03:786,39,0	1/1:16,0:13:21.63:292,22,0	1/1:24,0:23:28.75:218,29,0	1/1:11,0:8:2.98:22,3,0	1/1:34,0:33:63.90:1101,64,0	1/1:35,0:31:65.75:1001,66,0	1/1:11,0:11:23.98:334,24,0	1/1:19,0:16:17.85:143,18,0	1/1:23,0:20:23.96:346,24,0	1/1:9,0:9:9.85:45,10,0	1/1:15,0:14:27.04:508,27,0	1/1:34,0:31:74.16:1291,74,0	1/1:26,0:21:39.98:753,40,0	1/1:13,0:12:15.02:290,15,0
chr10	57181988	.	TG	T	1295.69	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-0.728;DP=351;FS=11.521;HRun=9;HaplotypeScore=57.2539;InbreedingCoeff=0.8871;MQ=83.11;MQ0=0;MQRankSum=0.848;QD=16.83;ReadPosRankSum=1.278;VQSLOD=2.6557;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,34:36:81.04:741,81,0	1/1:1,5:6:12.01:110,12,0	0/0:25,0:21:21.85:0,22,281	0/0:23,0:18:30.44:0,30,253	1/1:4,12:16:23.41:314,23,0	0/0:1,0:8:22.56:0,23,112	0/0:2,0:11:22.73:0,23,115	1/1:6,13:19:32.80:287,33,0	0/0:25,0:25:66.17:0,66,741	0/0:16,0:16:21.05:0,21,234	0/0:5,0:5:12.04:0,12,138	0/0:2,0:8:20.05:0,20,121	0/0:12,0:12:27.02:0,27,285	0/0:8,0:8:21.06:0,21,242	0/0:15,0:15:39.07:0,39,420	0/0:2,0:6:8.63:0,9,63	0/0:4,0:12:27.12:0,27,133	0/0:4,0:7:14.41:0,14,81	0/0:6,0:6:14.99:0,15,157	0/0:9,0:9:21.06:0,21,242	0/0:17,1:18:17.65:0,18,447	0/0:3,0:13:25.60:0,26,130	0/0:3,0:7:11.36:0,11,58	0/0:2,0:10:19.89:0,20,101	0/0:8,0:8:24.03:0,24,247	0/0:6,0:6:15.03:0,15,164	0/0:14,0:14:39.10:0,39,440	0/0:2,0:2:2.99:0,3,24
chr10	57182216	.	GTT	G	4377.33	PASS	AB=0.541;AC=25;AF=0.446;AN=56;BaseQRankSum=-4.304;DP=476;FS=15.738;HRun=14;HaplotypeScore=72.2623;InbreedingCoeff=0.9132;MQ=71.43;MQ0=2;MQRankSum=1.732;QD=16.27;ReadPosRankSum=6.722;VQSLOD=1.9431;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,29:37:67.14:660,67,0	1/1:1,0:7:16.46:71,16,0	0/0:18,0:13:18.04:0,18,215	0/0:28,0:21:27.55:0,28,270	1/1:6,25:32:31.07:409,31,0	1/1:2,10:12:30.01:278,30,0	1/1:0,15:18:29.49:356,29,0	1/1:11,1:27:41.30:193,41,0	0/0:3,0:11:21.04:0,21,213	0/0:5,0:13:30.05:0,30,302	0/0:3,0:7:14.98:0,15,143	1/1:2,16:18:39.01:361,39,0	0/0:17,0:17:45.15:0,45,629	0/0:7,0:8:23.54:0,24,268	0/0:4,0:12:18.03:0,18,182	1/1:3,8:12:23.73:206,24,0	1/1:9,24:33:65.69:594,66,0	0/1:3,16:20:9.89:350,0,10	0/0:14,0:21:39.01:0,39,371	0/0:5,0:11:20.95:0,21,206	0/0:5,0:9:11.97:0,12,106	1/1:0,12:12:23.96:222,24,0	1/1:4,11:16:26.67:234,27,0	1/1:4,18:22:47.94:444,48,0	0/0:3,0:10:23.98:0,24,216	0/0:6,0:17:39.08:0,39,425	0/0:4,0:16:30.05:0,30,297	0/0:1,0:6:9.02:0,9,91
chr10	57182478	.	C	CTGTG	22011.38	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-10.008;DP=573;FS=11.834;HRun=0;HaplotypeScore=110.2597;InbreedingCoeff=0.9584;MQ=78.93;MQ0=3;MQRankSum=-8.921;QD=48.27;ReadPosRankSum=6.694;VQSLOD=5.0130;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,30:31:54.14:1467,54,0	1/1:0,5:5:9.03:246,9,0	0/0:38,0:37:82.12:0,82,1528	0/0:45,0:38:66.28:0,66,1312	1/1:3,10:13:21.07:546,21,0	1/1:0,14:15:18.06:493,18,0	1/1:6,16:22:45.15:1161,45,0	1/1:6,14:23:54.06:1162,54,0	1/1:5,24:29:57.19:1491,57,0	1/1:1,12:13:36.12:941,36,0	1/1:1,11:13:11.63:314,12,0	1/1:3,18:21:39.13:1021,39,0	0/0:16,0:16:45.15:0,45,853	0/0:16,0:15:42.12:0,42,737	1/1:2,16:20:36.59:986,37,0	1/1:0,28:28:51.02:1395,51,0	1/1:3,15:19:39.13:1039,39,0	1/1:2,18:21:48.16:1304,48,0	1/1:3,11:14:42.14:1052,42,0	1/1:1,12:16:24.08:657,24,0	1/1:9,26:35:45.15:1195,45,0	1/1:2,8:11:18.06:469,18,0	1/1:1,10:12:21.07:567,21,0	1/1:7,23:30:51.18:1396,51,0	1/1:2,13:15:21.07:574,21,0	1/1:3,17:19:54.19:1399,54,0	1/1:0,21:21:30.10:809,30,0	1/1:0,4:6:12.04:328,12,0
chr10	57182556	.	CTG	C	74.58	PASS	AC=2;AF=0.037;AN=54;BaseQRankSum=4.101;DP=663;FS=0.000;HRun=0;HaplotypeScore=171.4226;InbreedingCoeff=0.5051;MQ=43.04;MQ0=21;MQRankSum=-3.239;QD=2.76;ReadPosRankSum=-2.796;VQSLOD=1.9267;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:21,6:23:24.67:167,25,0	0/0:11,0:11:4:0,4,146	0/0:2,0:2:6.02:0,6,116	0/0:3,0:1:3.01:0,3,58	./.	0/0:28,0:26:50.98:0,51,652	0/0:20,0:15:11.54:0,12,175	0/0:42,0:35:94.67:0,95,713	0/0:22,0:22:10.47:0,10,141	0/0:30,1:27:19.58:0,20,510	0/0:21,0:19:8.59:0,9,120	0/0:31,0:31:44.67:0,45,575	0/0:22,0:22:57.96:0,58,963	0/0:21,0:20:57.18:0,57,1021	0/0:27,0:27:10.13:0,10,237	0/0:35,0:33:43.89:0,44,635	0/0:21,0:20:41.91:0,42,590	0/0:12,0:11:20.76:0,21,246	0/0:27,0:25:33.27:0,33,547	0/0:48,0:44:22.39:0,22,205	0/0:17,0:14:7.11:0,7,89	0/0:21,0:21:24.47:0,24,256	0/0:22,0:21:35.89:0,36,416	0/0:26,0:25:26.79:0,27,388	0/0:17,0:17:17.69:0,18,171	0/0:22,0:18:9.57:0,10,271	0/0:36,0:34:10.73:0,11,265	0/0:12,0:8:8:0,8,56
chr10	57182564	.	CTG	C	2765.72	PASS	AB=0.986;AC=34;AF=0.630;AN=54;BaseQRankSum=-2.658;DP=644;FS=16.380;HRun=0;HaplotypeScore=164.7058;InbreedingCoeff=0.2461;MQ=42.78;MQ0=23;MQRankSum=-3.382;QD=5.46;ReadPosRankSum=-1.030;VQSLOD=1.6653;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:20:10.41:62,10,0	1/1:11,0:11:16:137,16,0	0/0:2,0:2:6.01:0,6,63	0/0:3,0:1:3.01:0,3,43	./.	0/1:27,0:25:34.91:103,0,35	0/1:16,1:11:2.16:37,0,2	1/1:8,24:28:76.67:515,77,0	1/1:22,0:22:8.34:153,8,0	1/1:35,0:30:4.40:353,4,0	1/1:18,2:18:4.19:27,4,0	0/1:28,0:28:46.88:73,0,47	0/0:21,0:21:50.93:0,51,713	0/0:22,0:21:54.03:0,54,665	1/1:27,0:27:4.88:168,5,0	0/0:29,0:27:29.17:0,29,147	0/0:22,0:21:12.19:0,12,87	0/1:13,0:11:9.55:68,0,10	1/1:20,0:19:14.24:177,14,0	1/1:45,1:43:27.54:215,28,0	0/1:19,0:16:7.74:37,0,8	1/1:22,0:22:3.76:111,4,0	0/1:22,0:21:19.78:68,0,20	0/1:29,0:28:18.33:46,0,18	0/1:17,1:18:2.52:87,0,3	1/1:24,0:21:29.71:244,30,0	1/1:34,1:33:1.38:213,1,0	1/1:14,0:8:5.95:43,6,0
chr10	57182566	.	GTGTC	G	2618.54	PASS	AB=1.000;AC=30;AF=0.556;AN=54;BaseQRankSum=-2.215;DP=635;FS=11.508;HRun=0;HaplotypeScore=179.4712;InbreedingCoeff=0.0412;MQ=42.83;MQ0=24;MQRankSum=-4.039;QD=5.25;ReadPosRankSum=-2.554;VQSLOD=1.0783;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:16,7:20:11.51:105,12,0	1/1:10,0:10:7.47:116,7,0	0/0:2,0:2:6.01:0,6,63	0/0:3,0:1:3.01:0,3,43	./.	0/1:26,0:24:78.67:79,0,134	0/1:17,0:11:5.72:6,0,15	1/1:31,0:26:76.80:535,77,0	1/1:21,0:22:17.39:143,17,0	0/1:34,0:30:29.71:301,0,30	1/1:18,0:18:4.41:27,4,0	0/1:28,0:28:71.46:71,0,117	0/0:21,0:21:59.95:0,60,1020	0/0:21,0:20:57.05:0,57,968	1/1:25,0:26:7.36:196,7,0	0/0:28,0:26:35.47:0,35,305	0/0:23,0:22:18.19:0,18,208	0/1:14,0:12:8.46:69,0,8	0/1:19,0:18:8.92:147,0,9	1/1:48,0:45:27.16:215,27,0	0/1:16,0:13:14.99:35,0,15	0/1:22,0:23:16.18:108,0,16	0/1:22,0:21:63.07:63,0,102	0/1:29,0:28:22.89:23,0,76	0/1:17,0:16:11.46:65,0,11	1/1:24,0:20:31.83:251,32,0	0/1:32,0:31:71.70:198,0,72	1/1:15,0:9:6.41:41,6,0
chr10	57183221	.	T	TATTA	8457.65	PASS	AC=42;AF=0.875;AN=48;BaseQRankSum=-6.498;DP=328;FS=0.704;HRun=0;HaplotypeScore=48.0839;InbreedingCoeff=0.7556;MQ=64.37;MQ0=0;MQRankSum=0.761;QD=31.92;ReadPosRankSum=-0.314;VQSLOD=4.5078;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:60.20:0,60,965	./.	./.	./.	0/0:15,0:15:27.08:0,27,414	1/1:4,11:15:27.09:648,27,0	1/1:6,4:12:12.04:289,12,0	1/1:16,7:24:24.07:438,24,0	1/1:5,2:9:12.04:275,12,0	1/1:5,7:14:25.18:439,25,0	1/1:5,4:11:14.92:248,15,0	1/1:1,4:5:9.03:217,9,0	0/0:10,0:10:21.06:0,21,315	./.	1/1:3,5:9:9.03:217,9,0	1/1:3,5:8:12.04:290,12,0	1/1:6,34:40:72.25:1722,72,0	1/1:8,13:21:24.08:579,24,0	1/1:8,8:16:27.09:618,27,0	1/1:2,3:6:9.03:183,9,0	1/1:3,2:5:6.02:145,6,0	1/1:3,2:5:3.01:72,3,0	1/1:3,4:7:9.03:217,9,0	1/1:6,3:9:9.03:217,9,0	1/1:9,3:12:9.03:217,9,0	1/1:7,10:17:30.10:702,30,0	1/1:6,4:10:9.03:217,9,0	1/1:4,6:10:21.07:507,21,0
chr10	57185152	.	TTC	T	308.57	PASS	AB=0.801;AC=5;AF=0.089;AN=56;BaseQRankSum=3.085;DP=620;FS=0.000;HRun=0;HaplotypeScore=85.5060;InbreedingCoeff=-0.1275;MQ=62.91;MQ0=11;MQRankSum=-5.073;QD=3.18;ReadPosRankSum=-3.580;VQSLOD=0.7606;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:28:14.28:0,14,250	0/0:3,0:2:6:0,6,51	0/0:35,0:11:23.98:0,24,224	0/0:29,0:16:23.55:0,24,316	0/0:30,0:28:68.02:0,68,683	0/1:18,3:20:69.10:69,0,507	0/1:11,6:16:70.24:70,0,255	0/0:34,0:29:53.54:0,54,692	0/0:22,0:20:45.09:0,45,636	0/0:36,0:34:96.30:0,96,1490	0/0:21,0:20:51.60:0,52,732	0/1:15,3:16:52.63:53,0,322	0/0:18,0:18:46.41:0,46,599	0/0:16,0:16:48.12:0,48,690	0/0:16,0:15:24.07:0,24,359	0/0:19,1:19:4.45:0,4,497	0/1:16,11:25:99:160,0,505	0/0:7,3:9:0.20:0,0,51	0/0:33,0:31:84.10:0,84,1154	0/0:26,0:25:56.81:0,57,789	0/0:14,0:14:26.90:0,27,311	0/0:15,0:15:3.23:0,3,354	0/1:11,3:13:73.04:73,0,379	0/0:14,1:15:32.45:0,32,461	0/0:31,0:29:68.88:0,69,994	0/0:34,0:34:99:0,102,1590	0/0:26,0:24:42.80:0,43,573	0/0:8,0:8:24:0,24,269
chr10	57185165	.	CT	C	2205.96	PASS	AB=0.728;AC=23;AF=0.411;AN=56;BaseQRankSum=-8.515;DP=571;FS=1.518;HRun=11;HaplotypeScore=65.4673;InbreedingCoeff=0.7364;MQ=52.72;MQ0=18;MQRankSum=6.788;QD=7.99;ReadPosRankSum=3.196;VQSLOD=2.2187;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:25:32.12:0,32,259	0/0:4,0:3:2.84:0,3,14	1/1:29,0:7:2.34:11,2,0	0/0:23,1:10:7.84:0,8,69	0/0:24,0:30:49.83:0,50,451	0/0:16,0:19:37:0,37,262	0/0:17,0:17:12.77:0,13,154	0/0:29,0:24:24.85:0,25,179	0/1:6,12:16:32.79:124,0,33	1/1:13,20:30:15.90:335,16,0	1/1:3,14:18:25.70:198,26,0	0/0:12,0:14:31.43:0,31,207	0/0:19,1:20:16.50:0,16,352	0/0:19,0:19:42.54:0,43,401	1/1:2,11:12:11.97:99,12,0	0/0:15,0:16:28.88:0,29,219	0/0:28,0:26:29.20:0,29,221	0/0:9,0:9:11.62:0,12,83	1/1:9,18:23:35.29:367,35,0	1/1:7,21:27:35.85:288,36,0	1/1:1,7:7:11.99:98,12,0	0/0:7,0:13:17.52:0,18,112	0/0:10,0:14:28.02:0,28,181	0/1:13,0:14:3.98:4,0,80	1/1:10,16:24:25.98:203,26,0	1/1:14,20:33:53.88:441,54,0	0/1:6,15:19:2.96:144,0,3	1/1:0,6:6:11.98:98,12,0
chr10	57188984	.	CTGTGTG	C	1211.99	PASS	AB=1.000;AC=30;AF=0.652;AN=46;BaseQRankSum=2.065;DP=672;FS=9.092;HRun=0;HaplotypeScore=115.6667;InbreedingCoeff=0.4320;MQ=52.00;MQ0=38;MQRankSum=-0.965;QD=3.32;ReadPosRankSum=0.609;VQSLOD=1.3138;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:37:11.97:0,12,97	0/0:4,0:4:3.01:0,3,76	./.	./.	0/0:16,0:19:1.76:0,2,24	./.	0/0:29,0:28:3.01:0,3,57	./.	1/1:22,8:24:0.47:1,0,0	1/1:21,0:20:2.67:27,3,0	0/1:8,0:7:0:0,0,0	./.	0/0:22,0:22:15.04:0,15,335	0/0:16,0:16:16.73:0,17,364	1/1:26,2:29:27.02:366,27,0	1/1:14,5:18:9.03:149,9,0	1/1:29,0:25:8.36:83,8,0	1/1:25,2:23:9.03:162,9,0	0/0:16,0:14:0.47:0,0,1	1/1:12,0:13:3.01:42,3,0	0/1:36,0:34:37.41:37,0,60	1/1:24,0:23:12.02:143,12,0	1/1:13,1:17:3.01:60,3,0	1/1:32,3:34:6.48:91,6,0	1/1:15,5:18:3.01:60,3,0	1/1:19,0:18:2.88:40,3,0	1/1:16,8:23:1.75:40,2,0	1/1:7,0:7:3.01:50,3,0
chr10	57191474	.	GTAC	G	2964.62	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=11.194;DP=755;FS=1.586;HRun=0;HaplotypeScore=125.8357;InbreedingCoeff=0.9918;MQ=93.63;MQ0=0;MQRankSum=-4.642;QD=42.97;ReadPosRankSum=1.622;VQSLOD=5.0033;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,51:53:99:2452,150,0	0/0:13,0:13:36.12:0,36,815	0/0:35,0:35:96.29:0,96,2024	0/0:32,0:32:86.23:0,86,1731	1/1:0,16:16:38.80:634,39,0	0/0:24,0:24:66.23:0,66,1459	0/0:23,0:23:57.20:0,57,1292	0/0:33,0:33:93.31:0,93,2069	0/0:24,0:24:69.24:0,69,1539	0/0:29,0:28:84.29:0,84,1882	0/0:16,0:16:44.95:0,45,1018	0/0:32,0:32:90.31:0,90,2035	0/0:23,0:23:66.23:0,66,1491	0/0:24,0:24:72.25:0,72,1627	0/0:35,0:35:99:0,102,2311	0/0:28,0:28:81.27:0,81,1792	0/0:36,0:36:99:0,108,2351	0/0:24,0:24:69.24:0,69,1559	0/0:21,0:21:57.20:0,57,1287	0/0:29,0:29:87.30:0,87,1953	0/0:41,0:41:99:0,111,2515	0/0:21,0:21:60.21:0,60,1360	0/0:19,0:19:57.20:0,57,1285	0/0:37,0:37:99:0,102,2312	0/0:26,0:26:72.25:0,72,1630	0/0:24,0:24:66.23:0,66,1466	0/0:31,0:31:87.30:0,87,1968	0/0:6,0:6:15.05:0,15,340
chr10	57192374	.	TG	T	8455.06	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=13.756;DP=652;FS=2.989;HRun=3;HaplotypeScore=63.7510;InbreedingCoeff=0.9995;MQ=81.84;MQ0=0;MQRankSum=-1.636;QD=33.16;ReadPosRankSum=1.445;VQSLOD=5.2901;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:75.24:0,75,1061	0/0:10,0:10:30.10:0,30,432	0/0:19,0:19:57.15:0,57,784	0/0:21,0:21:46.42:0,46,708	0/0:11,0:11:33.11:0,33,470	0/0:20,0:20:57.19:0,57,821	0/0:40,0:40:99:0,111,1555	0/0:22,0:22:66.21:0,66,933	1/1:1,22:23:63.20:781,63,0	1/1:0,20:20:60.19:744,60,0	1/1:0,8:8:24.08:297,24,0	0/0:29,0:29:84.27:0,84,1190	0/0:19,0:19:57.19:0,57,819	0/0:25,0:25:69.23:0,69,994	1/1:2,28:30:69.22:856,69,0	0/0:21,0:21:60.15:0,60,823	0/0:33,0:33:93.31:0,93,1338	0/0:20,0:20:57.19:0,57,818	1/1:2,18:20:51.14:608,51,0	1/1:2,12:14:36.07:427,36,0	1/1:1,80:81:99:2752,223,0	0/0:16,0:16:39.11:0,39,526	0/0:15,0:15:39.13:0,39,561	0/0:51,0:51:99:0,138,1969	1/1:4,14:18:39.12:481,39,0	1/1:0,15:15:45.12:543,45,0	1/1:0,16:16:48.15:595,48,0	1/1:0,10:10:30.09:372,30,0
chr10	57193244	.	AG	A	7983.34	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=14.199;DP=673;FS=10.345;HRun=3;HaplotypeScore=69.5394;InbreedingCoeff=0.9999;MQ=85.41;MQ0=0;MQRankSum=-1.579;QD=32.59;ReadPosRankSum=2.033;VQSLOD=4.6983;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,126,1811	0/0:11,0:11:33.10:0,33,458	0/0:29,0:29:40.14:0,40,824	0/0:23,0:23:65.80:0,66,924	0/0:26,0:25:72.22:0,72,1016	0/0:25,0:25:72.24:0,72,1033	0/0:24,0:24:72.24:0,72,1035	0/0:35,0:35:99:0,102,1436	1/1:1,19:20:51.16:632,51,0	1/1:1,22:23:63.19:770,63,0	1/1:1,18:19:42.09:503,42,0	0/0:26,0:26:72.24:0,72,1035	0/0:26,0:26:75.25:0,75,1079	0/0:36,0:36:99:0,105,1487	1/1:0,20:20:57.18:707,57,0	0/0:24,1:25:38.05:0,38,997	0/0:28,0:28:78.25:0,78,1103	0/0:14,0:14:39.13:0,39,557	1/1:1,24:25:72.18:858,72,0	1/1:1,20:21:54.10:647,54,0	1/1:4,32:36:87.27:1078,87,0	0/0:23,0:23:69.22:0,69,975	0/0:12,0:12:33.11:0,33,475	0/0:23,0:23:66.22:0,66,950	1/1:2,22:24:60.19:743,60,0	1/1:0,22:22:66.21:818,66,0	1/1:0,21:21:57.16:706,57,0	1/1:0,14:14:42.13:520,42,0
chr10	57193950	.	A	AAAAACAAAAC	26981.99	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=3.176;DP=594;FS=15.677;HRun=0;HaplotypeScore=193.9626;InbreedingCoeff=0.9753;MQ=59.94;MQ0=0;MQRankSum=-12.992;QD=61.60;ReadPosRankSum=-1.705;VQSLOD=3.0889;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:69.15:0,69,1746	0/0:10,0:10:30.10:0,30,884	0/0:8,0:7:12.04:0,12,303	0/0:18,0:18:21.07:0,21,542	0/0:20,0:20:45.61:0,46,1308	1/1:6,0:15:9.03:392,9,0	1/1:10,0:15:12.03:452,12,0	0/0:24,0:24:48.15:0,48,1301	1/1:7,11:22:39.13:1842,39,0	1/1:13,15:28:54.06:2361,54,0	1/1:9,6:15:21.07:739,21,0	1/1:15,0:24:51.17:1762,51,0	0/0:20,0:20:48.14:0,48,1339	0/0:28,0:28:69.24:0,69,2079	1/1:9,13:23:39.13:1878,39,0	1/1:12,0:19:21.07:787,21,0	1/1:16,0:24:21.06:844,21,0	1/1:13,0:19:27.08:1079,27,0	1/1:19,7:28:57.15:2069,57,0	1/1:18,12:34:48.15:1751,48,0	1/1:8,6:15:27.09:1210,27,0	1/1:13,0:21:30.09:1175,30,0	1/1:9,0:19:33.11:1203,33,0	1/1:20,0:37:40.37:1413,40,0	1/1:8,13:24:48.16:2144,48,0	1/1:12,8:23:42.12:1840,42,0	1/1:14,8:23:27.09:1273,27,0	1/1:5,5:10:18.06:767,18,0
chr10	57194531	.	A	AG	15145.05	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-11.231;DP=546;FS=2.350;HRun=3;HaplotypeScore=55.0032;InbreedingCoeff=0.9619;MQ=82.77;MQ0=0;MQRankSum=-4.471;QD=35.06;ReadPosRankSum=2.615;VQSLOD=5.4793;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:84.24:0,84,995	1/1:0,6:6:14.96:185,15,0	0/0:13,0:13:38.64:0,39,397	0/0:18,0:18:23.74:0,24,420	0/0:12,0:12:33.10:0,33,393	1/1:0,15:15:39.13:546,39,0	1/1:1,26:27:66.22:924,66,0	1/1:3,16:19:48.12:621,48,0	1/1:0,12:13:30.10:417,30,0	1/1:3,16:19:51.17:707,51,0	1/1:0,7:7:18.06:251,18,0	1/1:1,12:13:33.11:460,33,0	0/0:18,0:18:54.17:0,54,646	0/0:23,0:23:66.20:0,66,791	1/1:2,15:17:48.16:661,48,0	1/1:1,13:14:33.11:462,33,0	1/1:0,50:50:99:1803,129,0	1/1:0,41:41:99:1470,105,0	1/1:0,21:21:63.13:814,63,0	1/1:1,8:9:27.09:372,27,0	1/1:4,27:31:72.24:1006,72,0	1/1:2,18:20:6.14:506,6,0	1/1:0,12:12:30.10:420,30,0	1/1:2,35:37:99:1469,105,0	1/1:2,23:25:57.19:798,57,0	1/1:0,21:21:60.08:792,60,0	1/1:0,10:10:24.08:336,24,0	1/1:0,5:5:9.03:126,9,0
chr10	57194701	.	A	ACG	1498.86	PASS	AB=1.000;AC=25;AF=0.446;AN=56;BaseQRankSum=6.685;DP=395;FS=14.994;HRun=0;HaplotypeScore=124.3375;InbreedingCoeff=0.5504;MQ=62.51;MQ0=3;MQRankSum=-4.667;QD=6.94;ReadPosRankSum=-2.683;VQSLOD=2.1062;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:73.83:0,74,773	0/1:9,0:9:4.01:4,0,83	1/1:9,0:6:0.34:3,0,0	0/0:12,0:8:2.84:0,3,14	0/0:14,0:14:24.02:0,24,261	1/1:13,3:16:34.72:291,35,0	1/1:27,1:28:50.62:325,51,0	0/0:15,0:15:20.48:0,20,167	0/1:15,0:13:4.34:4,0,50	0/1:9,0:9:2.55:3,0,93	0/0:4,0:4:2.99:0,3,23	1/1:12,5:17:20.62:194,21,0	0/0:21,0:21:31.72:0,32,486	0/0:16,0:15:32.68:0,33,343	0/0:7,0:7:3:0,3,25	1/1:9,5:14:20.89:213,21,0	1/1:23,1:23:27.08:170,27,0	1/1:17,2:19:30:191,30,0	0/0:6,0:6:7.30:0,7,60	0/0:4,0:4:3:0,3,25	0/0:25,0:25:12.59:0,13,95	1/1:5,0:5:2.88:15,3,0	1/1:10,1:11:14.69:121,15,0	1/1:26,5:31:17.42:141,17,0	0/1:6,0:6:8.45:8,0,18	0/0:13,0:13:17.74:0,18,110	0/0:3,0:3:3:0,3,25	0/1:3,0:3:1.29:1,0,11
chr10	57194711	.	G	GCACACACACA	4458.63	PASS	AB=0.950;AC=32;AF=0.640;AN=50;BaseQRankSum=1.998;DP=411;FS=5.672;HRun=0;HaplotypeScore=168.0887;InbreedingCoeff=0.3160;MQ=50.79;MQ0=6;MQRankSum=-5.785;QD=14.86;ReadPosRankSum=-3.443;VQSLOD=2.2642;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:37:48.06:0,48,1120	0/0:4,0:8:6.02:0,6,107	./.	./.	0/0:11,0:12:13.75:0,14,277	1/1:17,0:19:3.95:354,4,0	0/1:28,0:31:6.32:89,0,6	0/1:7,0:13:3.22:3,0,16	1/1:10,4:14:6.02:256,6,0	1/1:15,0:14:21.07:570,21,0	0/1:4,0:5:0:0,0,0	1/1:15,0:16:11.67:332,12,0	0/0:19,0:21:42.14:0,42,1000	0/0:14,0:16:27.05:0,27,749	0/1:9,4:13:0.33:0,0,1	0/1:9,0:13:55.52:444,0,56	0/1:17,0:21:46.30:221,0,46	0/1:8,0:13:99:233,0,103	1/1:8,0:8:18.92:313,19,0	./.	1/1:21,4:32:2.31:105,2,0	1/1:3,0:6:2.55:20,3,0	1/1:8,0:10:2.43:99,2,0	0/1:23,0:26:0.72:97,0,1	1/1:4,1:10:2.66:11,3,0	1/1:20,0:20:42.12:874,42,0	1/1:5,0:5:9.03:209,9,0	1/1:4,0:5:9.03:227,9,0
chr10	57194734	.	C	CACACACTCTT	3081.50	PASS	AB=0.839;AC=20;AF=0.357;AN=56;BaseQRankSum=6.036;DP=538;FS=11.797;HRun=0;HaplotypeScore=163.4259;InbreedingCoeff=0.1007;MQ=45.38;MQ0=12;MQRankSum=-8.844;QD=8.98;ReadPosRankSum=-0.313;VQSLOD=1.5630;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:37:75.12:0,75,1934	0/1:8,0:8:12.24:12,0,78	0/0:7,0:4:8.31:0,8,156	0/0:15,0:9:24.08:0,24,483	0/0:13,0:12:27.09:0,27,687	1/1:6,12:24:22.35:468,22,0	1/1:14,21:36:25.73:432,26,0	0/1:23,0:21:15.88:16,0,752	0/1:21,0:20:99:117,0,400	0/1:21,0:18:37.27:37,0,533	0/0:6,0:6:5.82:0,6,123	1/1:7,5:24:18.45:568,18,0	0/0:19,0:19:48.15:0,48,1331	0/0:24,0:22:51.15:0,51,1303	0/0:18,0:17:18.07:0,18,315	0/1:6,0:23:41.33:675,0,41	0/1:9,1:25:69.85:70,0,175	0/1:6,0:16:63.11:331,0,63	0/0:19,0:18:29.74:0,30,382	0/0:5,0:5:9.03:0,9,185	0/1:41,0:40:26.24:26,0,574	1/1:3,0:9:6.96:125,7,0	0/1:6,4:12:16.55:143,0,17	0/1:13,19:35:6.51:225,0,7	0/1:10,0:10:0.20:0,0,0	0/0:23,0:23:28.44:0,28,646	0/0:7,0:7:21.02:0,21,375	0/1:11,0:11:9.77:10,0,402
chr10	57195677	.	T	TA	9968.88	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-13.539;DP=701;FS=6.924;HRun=1;HaplotypeScore=65.4461;InbreedingCoeff=0.9991;MQ=85.00;MQ0=0;MQRankSum=0.126;QD=40.52;ReadPosRankSum=1.302;VQSLOD=5.4126;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:59,0:59:99:0,175,2212	0/0:7,0:7:21.06:0,21,258	0/0:23,0:22:54.14:0,54,668	0/0:27,0:27:69.15:0,69,828	0/0:20,0:20:60.16:0,60,747	0/0:17,0:17:51.17:0,51,661	0/0:26,0:23:63.17:0,63,787	0/0:31,0:31:93.28:0,93,1170	1/1:0,14:14:39.13:584,39,0	1/1:1,18:19:54.18:808,54,0	1/1:0,20:20:54.18:809,54,0	0/0:35,0:34:99:0,99,1242	0/0:25,0:25:75.24:0,75,973	0/0:27,0:27:81.23:0,81,1021	1/1:0,24:23:69.23:1033,69,0	0/0:22,0:22:54.15:0,54,684	0/0:33,0:33:96.25:0,96,1211	0/0:26,0:26:78.25:0,78,1011	1/1:1,22:21:60.15:853,60,0	1/1:0,16:16:48.16:719,48,0	1/1:0,48:48:99:1994,135,0	0/0:18,0:18:54.15:0,54,670	0/0:12,0:12:36.12:0,36,465	0/0:47,0:45:99:0,123,1534	1/1:0,23:23:60.20:899,60,0	1/1:0,22:21:63.18:902,63,0	1/1:0,27:26:69.20:1009,69,0	1/1:0,10:10:24.08:358,24,0
chr10	57195772	.	C	CT	8117.24	PASS	AB=0.741;AC=36;AF=0.643;AN=56;BaseQRankSum=4.783;DP=651;FS=4.497;HRun=9;HaplotypeScore=146.8762;InbreedingCoeff=0.5416;MQ=58.07;MQ0=12;MQRankSum=-7.232;QD=17.27;ReadPosRankSum=2.188;VQSLOD=3.6185;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,1:37:66.65:0,67,701	0/0:11,0:11:26.99:0,27,234	0/0:37,0:14:17.52:0,18,153	0/1:36,0:13:19.35:19,0,38	0/0:26,0:26:26.86:0,27,517	1/1:2,16:18:25.30:471,25,0	1/1:13,17:25:28.45:559,28,0	0/0:35,0:35:65.82:0,66,556	1/1:5,6:10:24.06:261,24,0	1/1:13,19:28:45.83:694,46,0	0/1:10,11:21:31.43:336,0,31	0/1:12,6:18:8.37:249,0,8	0/0:17,0:17:38.99:0,39,338	0/0:17,0:17:29.93:0,30,260	1/1:10,15:25:27.52:489,28,0	1/1:7,14:21:19.33:446,19,0	1/1:4,15:19:25.34:346,25,0	0/1:8,5:13:34.04:133,0,34	1/1:14,19:31:33.45:627,33,0	1/1:11,14:24:0.61:443,1,0	1/1:5,6:11:19.56:184,20,0	0/1:9,10:19:7.95:290,0,8	1/1:7,9:16:38.66:381,39,0	1/1:11,6:15:20.89:211,21,0	0/1:14,12:25:2.10:359,0,2	1/1:17,18:33:38.70:768,39,0	1/1:10,19:25:46.41:581,46,0	1/1:7,6:12:26.97:270,27,0
chr10	57195777	.	T	TTTTTTC	18310.40	PASS	AB=1.000;AC=41;AF=0.732;AN=56;BaseQRankSum=1.845;DP=666;FS=3.187;HRun=0;HaplotypeScore=178.2856;InbreedingCoeff=0.8693;MQ=54.46;MQ0=16;MQRankSum=-10.371;QD=38.96;ReadPosRankSum=1.697;VQSLOD=4.7266;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,114,1798	0/0:11,0:11:32.67:0,33,480	0/0:44,0:14:18.18:0,18,250	0/1:43,0:14:17.36:17,0,56	0/0:30,0:30:83.61:0,84,1359	1/1:18,0:18:48.58:893,49,0	1/1:29,0:24:59.68:1052,60,0	0/0:36,0:35:71.29:0,71,1000	1/1:12,0:11:29.98:632,30,0	1/1:32,0:28:73.70:1531,74,0	1/1:21,0:21:31.63:976,32,0	1/1:17,0:16:33.37:520,33,0	0/0:17,0:17:38.25:0,38,713	0/0:17,0:16:42.06:0,42,656	1/1:27,0:27:58.79:1140,59,0	1/1:19,0:19:49.10:964,49,0	1/1:19,0:19:39.92:647,40,0	1/1:10,0:10:0.80:404,1,0	1/1:28,0:26:60.25:1246,60,0	1/1:27,0:26:59.98:1025,60,0	1/1:11,0:11:21.03:366,21,0	1/1:19,0:19:44.61:761,45,0	1/1:17,0:16:42.05:691,42,0	1/1:21,0:19:32.03:560,32,0	1/1:22,2:23:56.23:1203,56,0	1/1:35,0:32:82.82:1629,83,0	1/1:28,0:24:51.84:1330,52,0	1/1:11,2:12:30.10:722,30,0
chr10	57195787	.	CT	C	220.80	PASS	AB=0.957;AC=14;AF=0.250;AN=56;BaseQRankSum=5.591;DP=678;FS=1.336;HRun=13;HaplotypeScore=178.0528;InbreedingCoeff=-0.0597;MQ=50.92;MQ0=17;MQRankSum=-7.631;QD=0.70;ReadPosRankSum=3.436;VQSLOD=0.0153;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,2:40:48.47:0,48,814	0/0:13,0:14:32.48:0,32,261	0/1:53,0:14:8.77:9,0,49	0/0:46,1:13:6.91:0,7,25	0/0:32,5:37:8.33:0,8,646	0/0:18,0:18:31.47:0,31,143	0/0:29,0:24:20.78:0,21,156	0/0:32,1:32:44.56:0,45,369	1/1:12,1:12:8.95:52,9,0	0/1:31,2:29:34.60:35,0,97	0/1:19,2:21:32.82:33,0,36	0/0:15,0:14:27.77:0,28,128	0/0:16,0:16:34.84:0,35,310	0/0:18,0:17:35.40:0,35,306	0/1:24,1:25:36.20:45,0,36	0/0:17,0:18:26.36:0,26,141	0/1:16,1:19:1.90:2,0,34	0/0:9,0:10:8.02:0,8,40	0/1:26,3:26:4.52:86,0,5	0/1:23,1:24:24:24,0,46	0/1:7,0:7:7.43:30,0,7	0/0:20,0:20:16.21:0,16,98	0/0:18,0:16:24.61:0,25,112	0/1:21,0:19:11.35:11,0,31	0/0:30,0:30:12.60:0,13,172	0/1:28,1:27:0.40:0,0,129	0/1:26,1:23:17.37:37,0,17	0/1:12,0:11:3.99:4,0,44
chr10	57195788	.	T	TTTTC	11470.47	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=6.264;DP=680;FS=8.421;HRun=0;HaplotypeScore=172.2915;InbreedingCoeff=0.9568;MQ=49.76;MQ0=17;MQRankSum=-10.172;QD=26.99;ReadPosRankSum=6.186;VQSLOD=3.3996;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,113,1757	0/0:14,0:14:37.70:0,38,403	0/0:52,0:13:19.14:0,19,155	0/0:46,0:12:4.19:0,4,55	0/0:38,0:37:70.17:0,70,1332	1/1:18,0:18:42.39:467,42,0	1/1:28,1:24:40.27:505,40,0	0/0:30,0:29:68.87:0,69,760	1/1:9,6:14:9.84:459,10,0	1/1:18,15:29:52.38:1109,52,0	1/1:16,7:23:16.84:687,17,0	1/1:15,0:14:15.48:259,15,0	0/0:16,0:16:38.78:0,39,581	0/0:19,0:18:45.12:0,45,676	1/1:15,10:25:22.76:763,23,0	1/1:16,1:17:45.83:494,46,0	1/1:18,0:18:41.81:384,42,0	1/1:10,0:10:17.60:242,18,0	1/1:21,8:26:52.67:848,53,0	1/1:21,5:25:51.10:673,51,0	1/1:5,3:8:19.17:323,19,0	1/1:20,0:20:38.87:387,39,0	1/1:18,0:16:28.37:319,28,0	1/1:19,2:19:29.79:365,30,0	1/1:23,8:30:32.67:803,33,0	1/1:20,10:27:61.03:928,61,0	1/1:15,12:23:28.73:971,29,0	1/1:7,5:11:16.32:484,16,0
chr10	57195789	.	T	TTTC	9527.91	PASS	AB=0.955;AC=32;AF=0.571;AN=56;BaseQRankSum=3.948;DP=683;FS=7.570;HRun=0;HaplotypeScore=168.7304;InbreedingCoeff=0.4366;MQ=48.75;MQ0=17;MQRankSum=-8.333;QD=22.26;ReadPosRankSum=7.247;VQSLOD=3.7043;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,114,1680	0/0:13,0:13:36.42:0,36,424	0/0:51,0:12:17.10:0,17,196	0/0:46,0:12:12.54:0,13,77	0/0:37,0:36:99:0,102,1394	1/1:8,11:19:27.31:729,27,0	1/1:15,14:24:20.04:662,20,0	0/0:30,0:29:72.42:0,72,817	1/1:15,0:14:1.37:241,1,0	0/1:33,0:29:5.46:595,0,5	0/1:23,0:23:43.14:375,0,43	0/1:9,6:14:3.10:359,0,3	0/0:17,0:17:38.62:0,39,565	0/0:21,0:20:48.10:0,48,702	0/1:25,0:25:74.73:449,0,75	1/1:12,5:17:49.40:610,49,0	1/1:12,6:18:41.13:570,41,0	1/1:8,4:12:23.11:343,23,0	1/1:26,2:25:9.68:588,10,0	0/1:24,0:24:8.53:362,0,9	1/1:8,0:8:18.76:200,19,0	1/1:11,9:20:41.92:577,42,0	1/1:10,8:16:27.44:492,27,0	1/1:11,11:20:22.86:450,23,0	0/1:32,0:31:67.92:400,0,68	1/1:28,3:28:15.43:689,15,0	0/1:26,1:23:27.82:584,0,28	0/1:11,0:10:3.82:256,0,4
chr10	57195794	.	T	TGG	3440.81	PASS	AB=0.859;AC=18;AF=0.321;AN=56;BaseQRankSum=4.763;DP=676;FS=1.244;HRun=0;HaplotypeScore=177.0700;InbreedingCoeff=-0.4779;MQ=45.72;MQ0=17;MQRankSum=-7.408;QD=8.76;ReadPosRankSum=-1.196;VQSLOD=3.0868;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,114,1747	0/0:12,0:12:35.91:0,36,523	0/0:51,0:11:11.38:0,11,198	0/0:46,0:12:16.60:0,17,118	0/0:35,0:34:99:0,102,1518	0/1:17,2:19:70.11:70,0,314	0/1:25,4:24:99:127,0,373	0/0:26,0:25:70.08:0,70,999	0/1:13,3:15:99:217,0,170	0/1:29,4:29:99:165,0,621	0/1:19,7:26:99:475,0,307	0/1:11,5:15:99:153,0,139	0/0:17,0:17:44.70:0,45,698	0/0:21,0:20:54.17:0,54,832	0/1:16,6:22:99:246,0,344	0/1:16,2:18:46.50:47,0,403	0/1:17,0:17:38.95:39,0,193	0/1:10,1:11:83.26:83,0,84	0/0:25,1:22:24.10:0,24,566	0/1:20,6:25:99:288,0,313	0/0:10,0:10:18.46:0,18,180	0/1:16,6:22:99:300,0,156	0/1:15,1:14:88.50:89,0,208	0/1:17,4:19:60.01:60,0,204	0/1:25,8:32:99:597,0,403	0/1:28,3:28:99:141,0,629	0/1:19,7:22:99:272,0,304	0/1:10,1:10:72.31:72,0,126
chr10	57195802	.	G	GTTTTTTGT	8847.33	PASS	AB=0.984;AC=22;AF=0.393;AN=56;BaseQRankSum=0.154;DP=621;FS=20.174;HRun=0;HaplotypeScore=212.7404;InbreedingCoeff=-0.3684;MQ=43.03;MQ0=16;MQRankSum=-2.562;QD=22.34;ReadPosRankSum=-4.373;VQSLOD=2.2849;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:79.21:0,79,1967	0/0:12,0:12:33.04:0,33,579	0/0:40,0:11:10.37:0,10,80	0/0:39,0:9:2.63:0,3,13	0/0:37,0:36:64.94:0,65,1269	0/1:18,0:18:99:217,0,127	0/1:27,0:22:35.09:373,0,35	0/0:19,0:18:9.06:0,9,210	0/1:17,0:16:9.64:451,0,10	0/1:27,0:23:99:549,0,99	1/1:23,0:23:0.52:855,1,0	1/1:15,0:14:13.20:511,13,0	0/0:17,0:17:23.73:0,24,344	0/0:23,0:22:40.77:0,41,719	0/1:20,0:20:48.49:421,0,48	0/1:13,0:13:46.45:255,0,46	0/1:15,0:15:65.09:171,0,65	0/1:7,4:12:14.55:316,0,15	0/1:25,0:21:96.22:155,0,96	0/1:20,0:19:6.20:540,0,6	0/1:8,0:8:14.02:14,0,30	0/1:23,0:23:20.08:846,0,20	0/1:19,0:17:69.93:337,0,70	0/1:22,0:20:59.08:234,0,59	0/1:34,0:33:28.40:1232,0,28	0/1:23,0:20:99:287,0,111	0/1:23,0:20:34.88:642,0,35	0/1:12,0:11:5.21:442,0,5
chr10	57195805	.	T	TTTTGTTTG	12466.07	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=1.929;DP=616;FS=0.493;HRun=0;HaplotypeScore=201.8319;InbreedingCoeff=0.8718;MQ=42.31;MQ0=13;MQRankSum=-7.902;QD=31.09;ReadPosRankSum=-0.472;VQSLOD=4.0654;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:81.22:0,81,1852	0/0:12,0:12:30.10:0,30,666	0/0:35,0:10:9.03:0,9,120	0/0:40,0:10:5.91:0,6,40	0/0:35,0:34:57.19:0,57,1281	1/1:18,0:18:15.05:362,15,0	1/1:25,0:20:27.02:514,27,0	0/0:17,0:16:3:0,3,26	1/1:17,0:16:24.06:638,24,0	1/1:25,2:23:24.08:692,24,0	1/1:21,1:22:2.26:1002,2,0	1/1:17,0:16:33.08:712,33,0	0/0:17,0:17:23.77:0,24,451	0/0:23,0:22:36.07:0,36,731	1/1:20,0:20:21.07:590,21,0	1/1:11,1:12:15.05:385,15,0	1/1:16,0:16:15.03:203,15,0	1/1:11,2:13:18.04:538,18,0	1/1:27,0:23:12.03:214,12,0	1/1:21,0:20:30.09:772,30,0	1/1:8,0:8:6.02:141,6,0	1/1:23,2:25:48.15:1140,48,0	1/1:19,0:17:21.07:533,21,0	1/1:23,0:21:20.83:453,21,0	1/1:31,3:33:60.19:1652,60,0	1/1:23,0:20:15.05:410,15,0	1/1:22,1:20:27.09:940,27,0	1/1:9,2:10:18.06:575,18,0
chr10	57200194	.	T	TATGTA	6762.11	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-2.603;DP=681;FS=29.233;HRun=0;HaplotypeScore=161.4813;InbreedingCoeff=0.9731;MQ=66.90;MQ0=25;MQRankSum=-3.097;QD=30.05;ReadPosRankSum=-2.203;VQSLOD=2.5900;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:54.17:0,54,1071	0/0:12,0:12:36.12:0,36,738	0/0:19,0:15:33.08:0,33,602	0/0:18,0:14:23.43:0,23,445	0/0:42,0:41:99:0,117,2309	1/1:27,0:21:42.07:925,42,0	1/1:23,0:23:51.09:1084,51,0	0/0:32,0:27:57.20:0,57,1162	0/0:27,0:27:73.49:0,73,1467	0/0:36,0:36:99:0,108,2186	0/0:24,0:24:60.21:0,60,1230	1/1:34,0:26:57.13:1259,57,0	0/0:25,0:25:72.23:0,72,1440	0/0:21,0:20:60.19:0,60,1194	0/0:29,0:29:81.25:0,81,1546	1/1:23,0:19:30.03:656,30,0	1/1:20,5:19:26.78:530,27,0	1/1:3,28:25:6.02:133,6,0	0/0:23,0:23:58.75:0,59,1173	0/0:25,0:25:63.22:0,63,1292	0/0:13,0:13:22.32:0,22,434	1/1:14,0:13:26.41:600,26,0	1/1:17,0:16:39.10:869,39,0	1/1:27,3:19:32.86:706,33,0	0/0:23,0:23:63.22:0,63,1292	0/0:27,0:27:75.25:0,75,1503	0/0:32,0:32:93.28:0,93,1860	0/0:4,0:4:9.03:0,9,185
chr10	57200199	.	AAAGAT	A	6490.33	PASS	AB=0.625;AC=15;AF=0.268;AN=56;BaseQRankSum=-2.553;DP=662;FS=40.009;HRun=0;HaplotypeScore=154.5046;InbreedingCoeff=0.8690;MQ=63.23;MQ0=31;MQRankSum=-3.408;QD=33.28;ReadPosRankSum=-0.124;VQSLOD=2.7316;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:66.21:0,66,1343	0/0:12,0:12:36.12:0,36,738	0/0:19,0:12:33.08:0,33,602	0/0:17,0:12:23.43:0,23,445	0/0:42,0:40:99:0,120,2405	1/1:1,27:21:42.08:925,42,0	1/1:1,22:22:51.09:1084,51,0	0/0:29,0:22:57.20:0,57,1162	0/0:25,0:25:73.49:0,73,1467	0/0:36,0:36:99:0,108,2186	0/0:22,0:22:60.21:0,60,1230	1/1:2,34:28:57.13:1259,57,0	0/0:26,0:26:78.25:0,78,1598	0/0:21,0:20:60.19:0,60,1194	0/0:28,0:28:81.25:0,81,1546	1/1:1,20:17:30.03:656,30,0	0/1:10,15:19:68.82:392,0,69	0/0:31,0:24:3.01:0,3,48	0/0:20,0:20:58.75:0,59,1173	0/0:22,0:22:63.22:0,63,1292	0/0:11,0:11:19.31:0,19,372	1/1:2,13:14:25.89:600,26,0	1/1:0,16:15:39.10:869,39,0	1/1:5,26:20:33.11:706,33,0	0/0:22,0:22:63.22:0,63,1292	0/0:26,0:26:75.25:0,75,1503	0/0:32,0:32:93.28:0,93,1860	0/0:3,0:3:9.03:0,9,185
chr10	57200208	.	T	TA	8478.26	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=0.581;DP=622;FS=3.577;HRun=3;HaplotypeScore=101.5524;InbreedingCoeff=0.9714;MQ=54.71;MQ0=39;MQRankSum=-10.966;QD=37.85;ReadPosRankSum=2.515;VQSLOD=4.8039;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:63.19:0,63,756	0/0:11,0:11:33.10:0,33,396	0/0:15,0:5:15.04:0,15,172	0/0:18,0:9:16.60:0,17,184	0/0:41,0:37:99:0,111,1319	0/0:25,0:18:45.11:0,45,512	0/0:21,0:20:48.08:0,48,518	0/0:23,0:16:48.14:0,48,566	1/1:4,18:22:63.18:844,63,0	1/1:6,29:35:99:1419,105,0	1/1:5,17:22:51.17:713,51,0	0/0:32,0:24:60.13:0,60,678	0/0:27,0:25:75.22:0,75,886	0/0:21,0:20:57.17:0,57,684	1/1:1,21:22:66.22:923,66,0	0/0:19,0:15:30.07:0,30,345	0/0:25,0:19:27.06:0,27,307	0/0:31,0:24:6.02:0,6,72	1/1:0,19:18:54.15:718,54,0	1/1:5,14:19:51.16:695,51,0	1/1:1,6:7:18.01:223,18,0	0/0:16,0:15:34.80:0,35,423	0/0:18,0:17:45.49:0,45,493	0/0:33,0:22:32.68:0,33,360	1/1:6,16:22:54.16:721,54,0	1/1:3,20:23:63.21:881,63,0	1/1:2,28:30:87.29:1216,87,0	1/1:0,3:3:9.03:126,9,0
chr10	57200218	.	T	TA	6184.90	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=6.048;DP=590;FS=7.674;HRun=3;HaplotypeScore=103.2441;InbreedingCoeff=0.9455;MQ=46.55;MQ0=46;MQRankSum=-14.084;QD=33.98;ReadPosRankSum=2.480;VQSLOD=4.7751;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:78.23:0,78,924	0/0:12,0:12:30.09:0,30,360	0/0:16,0:2:3:0,3,26	0/0:15,0:5:12:0,12,129	0/0:42,0:38:99:0,105,1236	0/0:26,0:20:42.11:0,42,492	0/0:22,0:18:36.04:0,36,384	0/0:24,0:11:27.08:0,27,324	1/1:0,17:17:45.15:628,45,0	1/1:7,21:28:65.25:887,65,0	1/1:2,13:15:33.11:461,33,0	0/0:31,0:24:54.15:0,54,636	0/0:27,0:25:72.20:0,72,851	0/0:22,0:21:63.18:0,63,744	1/1:2,19:21:57.11:737,57,0	0/0:21,0:17:39.11:0,39,456	0/0:25,0:20:31.34:0,31,363	0/0:33,0:27:9.03:0,9,108	1/1:4,10:12:30.09:403,30,0	1/1:1,13:14:33.11:461,33,0	1/1:1,7:8:16.82:190,17,0	0/0:16,0:15:39.54:0,40,451	0/0:18,0:17:38.95:0,39,445	0/0:30,0:21:35.75:0,36,420	1/1:1,15:16:39.13:545,39,0	1/1:1,18:19:54.18:755,54,0	1/1:4,24:28:77.43:1033,77,0	1/1:0,2:2:6.02:84,6,0
chr10	57200248	.	T	TA	2216.51	PASS	AB=0.729;AC=12;AF=0.231;AN=52;BaseQRankSum=5.021;DP=577;FS=4.638;HRun=3;HaplotypeScore=107.2410;InbreedingCoeff=-0.0887;MQ=43.87;MQ0=60;MQRankSum=-9.602;QD=14.30;ReadPosRankSum=-5.836;VQSLOD=1.2523;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:76.48:0,76,903	0/0:9,0:9:27.08:0,27,322	./.	./.	0/0:39,0:35:99:0,102,1213	0/0:26,0:21:60.17:0,60,708	0/0:23,0:16:20.99:0,21,234	0/0:46,0:3:9.02:0,9,96	0/1:9,11:20:99:413,0,128	0/1:12,7:19:99:246,0,275	0/1:5,4:9:17.88:191,0,18	0/0:24,0:22:54.12:0,54,613	0/0:25,0:23:66.19:0,66,779	0/0:22,0:21:60.17:0,60,708	0/1:10,6:16:99:221,0,114	0/0:25,0:24:63.19:0,63,755	0/0:26,0:26:48.11:0,48,548	0/0:26,0:25:30.09:0,30,360	0/1:4,4:7:72.01:108,0,72	0/1:8,13:21:99:391,0,131	0/1:5,1:6:59.41:65,0,59	0/0:20,0:20:48.11:0,48,552	0/0:24,0:23:69.15:0,69,781	0/0:26,0:23:48.15:0,48,576	0/1:8,6:14:50.80:188,0,51	0/1:11,2:13:78.73:79,0,222	0/1:16,6:22:99:218,0,272	1/1:1,6:7:18.06:249,18,0
chr10	57200258	.	T	TA	4043.65	PASS	AB=0.625;AC=21;AF=0.389;AN=54;BaseQRankSum=3.020;DP=579;FS=7.029;HRun=3;HaplotypeScore=89.1142;InbreedingCoeff=0.8886;MQ=45.90;MQ0=60;MQRankSum=-7.223;QD=26.09;ReadPosRankSum=-4.512;VQSLOD=1.3409;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:90.23:0,90,1052	0/0:10,0:10:30.09:0,30,360	./.	0/0:15,0:1:3.01:0,3,36	0/0:36,0:32:96.28:0,96,1139	0/0:25,0:22:63.16:0,63,733	0/0:19,0:12:27.08:0,27,324	0/0:55,0:8:21.04:0,21,233	1/1:5,14:19:40.38:584,40,0	1/1:9,12:21:36.12:503,36,0	1/1:2,7:9:21.07:293,21,0	0/0:25,0:23:54.10:0,54,601	0/0:25,0:23:69.21:0,69,828	0/0:20,0:19:54.16:0,54,648	1/1:5,10:15:27.09:378,27,0	0/0:27,0:26:63.16:0,63,733	0/0:26,0:26:55.38:0,55,627	0/0:22,0:21:30.09:0,30,360	1/1:4,3:5:9.03:126,9,0	1/1:8,17:25:51.13:691,51,0	1/1:3,2:5:7.06:74,7,0	0/0:19,0:19:48.15:0,48,576	0/0:24,0:23:57.17:0,57,684	0/0:27,0:25:54.15:0,54,636	1/1:2,9:11:27.09:378,27,0	1/1:7,5:12:15.05:209,15,0	0/1:8,12:20:5.29:347,0,5	1/1:0,11:11:33.11:462,33,0
chr10	57200726	.	G	GA	2447.22	PASS	AB=0.893;AC=25;AF=0.446;AN=56;BaseQRankSum=-2.559;DP=595;FS=11.272;HRun=13;HaplotypeScore=78.8808;InbreedingCoeff=0.4153;MQ=53.48;MQ0=18;MQRankSum=1.012;QD=7.42;ReadPosRankSum=-2.403;VQSLOD=0.9806;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,2:38:15.99:0,16,374	0/0:9,0:9:0.67:0,1,103	0/1:6,0:4:11.83:12,0,25	0/0:9,0:4:4.59:0,5,16	0/0:24,0:25:32.27:0,32,252	0/1:22,1:23:7.28:7,0,227	0/0:33,0:34:82.28:0,82,557	0/1:28,2:30:3.89:4,0,264	1/1:3,14:17:0.48:147,0,0	1/1:5,16:21:41.84:375,42,0	0/1:10,5:16:5.89:64,0,6	0/0:19,0:18:33.12:0,33,206	0/0:16,0:16:29.39:0,29,196	0/0:16,0:15:25.80:0,26,160	1/1:11,5:16:33.49:270,33,0	0/0:12,0:11:20.64:0,21,144	0/0:27,0:28:49.10:0,49,344	0/0:29,0:30:50.67:0,51,313	1/1:6,19:26:36.20:440,36,0	1/1:10,21:31:7.26:323,7,0	1/1:5,2:7:3.89:29,4,0	0/1:22,1:22:15.66:16,0,182	0/1:26,0:26:36.37:36,0,163	0/0:21,0:21:32.50:0,33,202	1/1:14,9:23:36.11:318,36,0	1/1:15,9:23:25.68:304,26,0	0/1:14,12:27:22.92:188,0,23	1/1:5,4:6:8.53:106,9,0
chr10	57205454	.	AC	A	4325.95	PASS	AB=0.998;AC=44;AF=0.786;AN=56;BaseQRankSum=-0.245;DP=510;FS=47.298;HRun=1;HaplotypeScore=53.1393;InbreedingCoeff=0.1040;MQ=71.91;MQ0=20;MQRankSum=-3.749;QD=10.15;ReadPosRankSum=-3.431;VQSLOD=-0.1577;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:19,0:19:48.27:48,0,126	0/1:10,0:10:16.95:17,0,123	0/1:49,1:16:23.93:24,0,81	0/0:56,0:25:27.20:0,27,229	0/0:28,0:28:8.54:0,9,382	0/1:16,0:16:4.78:148,0,5	1/1:8,1:9:18.35:136,18,0	0/1:31,0:30:25.76:26,0,429	1/1:15,0:15:41.89:354,42,0	1/1:20,0:20:51.30:435,51,0	1/1:2,17:19:30.40:192,30,0	0/1:8,0:7:4.62:83,0,5	0/1:23,0:23:43.09:43,0,268	0/1:12,0:12:21.89:22,0,135	1/1:12,0:12:27.87:199,28,0	1/1:5,0:5:12.33:78,12,0	1/1:7,0:5:12.11:76,12,0	1/1:14,0:14:4.06:132,4,0	1/1:24,0:23:59.88:533,60,0	1/1:19,0:17:50.76:411,51,0	1/1:4,0:4:11.88:94,12,0	1/1:3,0:3:5.67:28,6,0	1/1:8,1:9:18.59:131,19,0	1/1:9,0:8:8.77:64,9,0	1/1:19,0:18:51.53:391,52,0	1/1:19,0:16:41.80:347,42,0	1/1:0,16:16:2.94:19,3,0	1/1:32,0:33:39.31:297,39,0
chr10	57206449	.	GA	G	10627.82	PASS	AB=0.586;AC=36;AF=0.692;AN=52;BaseQRankSum=4.085;DP=824;FS=24.274;HRun=2;HaplotypeScore=78.5929;InbreedingCoeff=0.7752;MQ=53.21;MQ0=33;MQRankSum=1.887;QD=18.74;ReadPosRankSum=5.191;VQSLOD=3.5541;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:52:99:0,135,1890	0/1:5,6:10:95.20:95,0,117	0/0:36,0:12:30.14:0,30,346	0/0:41,0:16:32.93:0,33,423	0/0:23,0:23:51.17:0,51,751	1/1:1,12:12:30.10:389,30,0	1/1:1,27:27:39.60:499,40,0	0/0:22,0:17:48.16:0,48,719	1/1:2,39:35:42.14:545,42,0	1/1:2,24:23:63.18:789,63,0	1/1:0,12:12:21.07:273,21,0	1/1:1,34:32:69.22:896,69,0	0/0:36,0:36:99:0,102,1489	0/0:43,0:43:99:0,120,1772	1/1:2,42:41:54.17:696,54,0	1/1:2,30:30:54.18:701,54,0	1/1:3,35:35:21.88:773,22,0	0/1:2,19:18:28.12:295,0,28	1/1:0,10:10:27.09:351,27,0	1/1:0,9:9:11.99:136,12,0	1/1:4,104:88:98.75:1284,99,0	1/1:0,2:2:1.29:36,1,0	./.	1/1:3,68:67:99:1326,103,0	1/1:1,15:14:15.05:195,15,0	1/1:1,31:28:81.23:1022,81,0	1/1:2,16:16:26.85:329,27,0	./.
chr10	57207567	.	T	TG	90.76	PASS	AB=0.811;AC=5;AF=0.089;AN=56;BaseQRankSum=5.928;DP=573;FS=46.284;HRun=0;HaplotypeScore=81.4189;InbreedingCoeff=-0.1028;MQ=82.93;MQ0=1;MQRankSum=-5.735;QD=1.82;ReadPosRankSum=3.088;VQSLOD=0.1723;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,111,1508	0/0:7,0:7:21.07:0,21,293	0/0:27,0:27:78.09:0,78,981	0/0:18,0:18:51.17:0,51,703	0/0:29,0:29:84.26:0,84,1156	0/1:3,2:5:71.86:75,0,72	0/0:8,1:9:1.08:0,1,270	0/0:56,0:56:99:0,163,2251	0/0:22,0:22:66.22:0,66,912	0/0:31,0:31:87.28:0,87,1188	0/0:20,0:20:57.18:0,57,796	0/1:12,2:14:7.62:8,0,421	0/0:26,0:26:78.26:0,78,1090	0/0:17,0:17:48.16:0,48,671	0/0:25,0:25:75.25:0,75,1048	0/1:6,2:8:61.66:62,0,211	0/0:9,0:9:18.05:0,18,235	0/0:9,0:9:27.09:0,27,377	0/0:23,0:23:66.22:0,66,923	0/0:24,0:24:72.22:0,72,987	0/0:25,0:24:69.20:0,69,930	0/1:10,1:11:8.93:9,0,325	0/1:8,4:12:48.18:48,0,301	0/0:12,1:13:33.11:0,33,461	0/0:39,0:39:99:0,117,1618	0/0:26,0:26:78.25:0,78,1076	0/0:25,0:25:75.25:0,75,1049	0/0:6,0:6:18.06:0,18,252
chr10	57207572	.	GATA	G	36.76	PASS	AB=0.822;AC=5;AF=0.089;AN=56;BaseQRankSum=5.931;DP=601;FS=53.912;HRun=0;HaplotypeScore=110.3523;InbreedingCoeff=-0.0829;MQ=82.17;MQ0=1;MQRankSum=-5.867;QD=0.68;ReadPosRankSum=4.071;VQSLOD=-0.5187;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,120,2733	0/0:7,0:7:21.07:0,21,464	0/0:27,0:27:78.26:0,78,1670	0/0:20,0:20:54.18:0,54,1189	0/0:29,0:29:87.28:0,87,1931	0/1:3,2:5:61.41:61,0,193	0/0:10,1:11:5.68:0,6,589	0/0:59,0:59:99:0,172,3887	0/0:23,0:23:57.20:0,57,1306	0/0:30,0:30:87.29:0,87,1943	0/0:20,0:20:57.20:0,57,1315	0/1:12,2:14:0.65:1,0,786	0/0:24,0:24:72.25:0,72,1649	0/0:16,0:16:48.16:0,48,1089	0/0:27,0:27:81.28:0,81,1853	0/1:8,2:10:45.72:46,0,507	0/0:14,0:14:36.12:0,36,796	0/0:11,0:11:33.11:0,33,758	0/0:26,0:26:72.25:0,72,1650	0/0:26,0:26:75.26:0,75,1666	0/0:25,0:24:69.24:0,69,1588	0/1:11,1:12:0.29:0,0,658	0/1:9,4:13:28.48:28,0,577	0/0:11,1:12:33.11:0,33,760	0/0:40,0:40:99:0,117,2693	0/0:28,0:28:84.29:0,84,1931	0/0:25,0:25:75.26:0,75,1710	0/0:6,0:6:18.06:0,18,413
chr10	57207583	.	TGGGGTAG	T	449.17	PASS	AB=0.854;AC=6;AF=0.107;AN=56;BaseQRankSum=5.933;DP=603;FS=56.734;HRun=0;HaplotypeScore=163.5853;InbreedingCoeff=-0.1216;MQ=78.43;MQ0=1;MQRankSum=-5.894;QD=5.91;ReadPosRankSum=4.139;VQSLOD=1.1225;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,120,4850	0/0:6,0:6:18.06:0,18,756	0/0:24,0:24:72.25:0,72,2670	0/0:17,0:17:51.17:0,51,1869	0/0:27,0:27:78.27:0,78,3109	0/1:4,2:6:99:139,0,384	0/1:13,1:14:25.25:25,0,1472	0/0:57,0:57:99:0,172,6191	0/0:23,0:23:69.24:0,69,2860	0/0:28,0:28:84.29:0,84,3319	0/0:22,0:22:66.23:0,66,2673	0/1:15,2:17:77.29:77,0,1760	0/0:26,0:26:78.27:0,78,3037	0/0:17,0:17:51.18:0,51,1904	0/0:27,0:27:81.26:0,81,3218	0/1:9,2:11:99:122,0,1100	0/0:15,0:15:39.13:0,39,1637	0/0:11,0:11:33.11:0,33,1337	0/0:21,0:21:63.22:0,63,2608	0/0:23,0:23:69.24:0,69,2752	0/0:33,0:32:93.32:0,93,3809	0/1:14,1:15:34.62:35,0,1496	0/1:9,4:13:99:175,0,1088	0/0:15,1:16:45.15:0,45,1854	0/0:32,0:32:96.33:0,96,3813	0/0:30,0:30:90.31:0,90,3650	0/0:28,0:28:84.29:0,84,3425	0/0:4,0:4:12.04:0,12,497
chr10	57207695	.	CA	C	16813.81	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=9.464;DP=755;FS=10.781;HRun=2;HaplotypeScore=106.7140;InbreedingCoeff=0.9940;MQ=88.87;MQ0=0;MQRankSum=-6.829;QD=34.67;ReadPosRankSum=6.757;VQSLOD=3.5582;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:61,0:61:99:0,181,2642	0/0:12,0:12:36.12:0,36,538	0/0:35,0:35:99:0,99,1382	0/0:38,1:37:89.90:0,90,1389	0/0:27,0:27:81.27:0,81,1201	1/1:0,15:15:42.14:545,42,0	1/1:1,30:30:84.27:1090,84,0	0/0:44,0:44:99:0,129,1866	1/1:0,35:35:90.29:1168,90,0	1/1:1,36:37:99:1388,108,0	1/1:1,20:20:48.16:623,48,0	1/1:0,26:26:69.22:894,69,0	0/0:30,0:30:87.28:0,87,1273	0/0:21,0:21:63.19:0,63,904	1/1:1,24:25:57.19:740,57,0	1/1:1,12:13:33.11:428,33,0	1/1:0,33:33:93.30:1207,93,0	1/1:1,22:23:63.20:818,63,0	1/1:0,26:26:78.21:980,78,0	1/1:0,25:25:66.15:835,66,0	1/1:1,50:51:99:1830,141,0	1/1:0,8:8:21.07:273,21,0	1/1:0,6:6:15.05:194,15,0	1/1:0,40:40:99:1324,102,0	1/1:0,18:18:45.15:583,45,0	1/1:0,26:26:78.24:997,78,0	1/1:0,21:21:54.04:700,54,0	1/1:0,5:5:15.05:195,15,0
chr10	57208088	.	G	GAA	2527.75	PASS	AB=0.801;AC=33;AF=0.611;AN=54;BaseQRankSum=2.354;DP=474;FS=3.306;HRun=13;HaplotypeScore=84.0206;InbreedingCoeff=0.1955;MQ=51.18;MQ0=24;MQRankSum=-2.492;QD=6.98;ReadPosRankSum=-3.443;VQSLOD=0.1903;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:20:33.17:0,33,320	0/0:8,0:10:4.98:0,5,81	./.	0/1:8,0:4:6.97:7,0,14	0/0:26,0:29:13.35:0,13,263	1/1:9,7:17:23.76:330,24,0	0/1:7,1:9:12.09:72,0,12	0/0:16,0:17:18.20:0,18,138	0/1:11,1:19:11.83:136,0,12	0/1:16,0:20:41.90:89,0,42	1/1:13,0:19:1.56:93,2,0	1/1:7,8:11:9.03:122,9,0	0/0:13,0:15:29.44:0,29,234	0/0:16,0:13:17.76:0,18,146	1/1:10,0:14:14.10:97,14,0	1/1:6,11:16:1.27:265,1,0	1/1:13,19:32:10.05:392,10,0	1/1:12,3:20:13.61:171,14,0	0/1:16,0:20:42.68:50,0,43	0/1:22,0:29:25.44:153,0,25	1/1:9,2:11:8.84:79,9,0	1/1:7,4:10:10.28:125,10,0	1/1:12,4:11:16.02:137,16,0	1/1:5,10:15:17.54:200,18,0	0/1:7,1:12:16.94:47,0,17	0/1:19,0:17:22.12:97,0,22	0/1:9,0:12:14.10:23,0,14	1/1:7,0:7:5.39:23,5,0
chr10	57208102	.	G	GA	3133.09	PASS	AB=1.000;AC=24;AF=0.429;AN=56;BaseQRankSum=0.482;DP=486;FS=2.020;HRun=13;HaplotypeScore=63.3998;InbreedingCoeff=0.8489;MQ=56.50;MQ0=15;MQRankSum=-0.111;QD=14.44;ReadPosRankSum=0.046;VQSLOD=4.3561;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:43.29:0,43,500	0/0:9,0:9:20.95:0,21,184	0/1:7,0:1:0:0,0,0	0/1:13,0:7:3.65:4,0,100	0/0:29,0:28:66.02:0,66,598	0/0:20,0:20:20.97:0,21,281	0/0:8,0:7:14.87:0,15,122	0/0:27,0:27:65.93:0,66,602	1/1:6,9:15:23.09:241,23,0	1/1:9,18:26:51.62:583,52,0	1/1:12,8:18:42.08:468,42,0	0/0:13,0:10:9.11:0,9,101	0/0:16,0:16:39.01:0,39,353	0/0:16,0:13:32.98:0,33,298	1/1:2,12:13:11.77:137,12,0	0/0:16,0:16:21.76:0,22,237	0/0:29,0:27:50.44:0,50,400	0/0:19,0:19:22.11:0,22,184	1/1:17,5:21:48.14:546,48,0	1/1:13,19:32:32.83:503,33,0	1/1:3,3:5:9.03:104,9,0	0/0:9,0:8:17.98:0,18,152	0/0:18,0:13:3.48:0,3,146	0/0:17,0:16:26.91:0,27,219	1/1:7,8:15:16.45:168,16,0	1/1:13,14:24:23.79:441,24,0	1/1:5,8:13:8.29:79,8,0	1/1:4,1:4:6.02:69,6,0
chr10	57208430	.	A	AG	17722.32	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-15.614;DP=594;FS=0.695;HRun=0;HaplotypeScore=57.7587;InbreedingCoeff=0.9880;MQ=82.51;MQ0=0;MQRankSum=-5.747;QD=43.23;ReadPosRankSum=3.329;VQSLOD=5.2754;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:78.25:0,78,1074	0/0:11,0:11:30.09:0,30,404	0/0:21,0:21:57.17:0,57,748	0/0:14,0:14:16.34:0,16,421	0/0:33,0:33:90.28:0,90,1226	1/1:1,19:20:54.18:863,54,0	1/1:0,27:27:75.26:1199,75,0	0/0:26,0:26:72.23:0,72,989	1/1:0,20:20:57.19:911,57,0	1/1:2,33:35:99:1603,102,0	1/1:1,19:20:54.18:863,54,0	1/1:0,17:17:42.14:671,42,0	0/0:32,0:32:96.32:0,96,1343	0/0:21,0:21:60.19:0,60,822	1/1:0,32:31:93.32:1486,93,0	1/1:0,24:24:69.24:1103,69,0	1/1:0,21:21:54.18:863,54,0	1/1:0,24:24:66.23:1055,66,0	1/1:0,14:14:42.14:661,42,0	1/1:0,30:30:69.23:1097,69,0	1/1:0,19:19:51.17:815,51,0	1/1:0,14:14:36.12:575,36,0	1/1:1,14:15:36.12:566,36,0	1/1:0,24:24:69.24:1101,69,0	1/1:0,10:10:27.09:431,27,0	1/1:1,18:19:57.19:902,57,0	1/1:0,21:21:51.17:815,51,0	1/1:0,4:4:9.03:144,9,0
chr10	57209165	.	TGTCA	T	7363.62	PASS	AB=0.917;AC=23;AF=0.411;AN=56;BaseQRankSum=11.609;DP=524;FS=2.155;HRun=0;HaplotypeScore=105.8283;InbreedingCoeff=0.9162;MQ=78.03;MQ0=2;MQRankSum=-13.366;QD=39.80;ReadPosRankSum=0.791;VQSLOD=5.2702;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,105,2641	0/0:8,0:8:24.08:0,24,621	0/0:9,0:9:24.03:0,24,423	0/0:23,0:23:44.89:0,45,982	0/0:22,0:22:57.17:0,57,1420	0/0:18,0:18:48.13:0,48,1125	0/0:15,0:15:36.11:0,36,897	0/0:32,0:32:93.31:0,93,2305	1/1:3,12:15:45.09:790,45,0	1/1:7,9:16:33.10:554,33,0	1/1:3,19:22:57.20:1047,57,0	0/0:18,0:18:51.18:0,51,1306	0/0:19,0:19:54.19:0,54,1415	0/0:20,0:20:45.15:0,45,1186	1/1:2,16:18:47.91:725,48,0	0/1:10,1:11:22.03:22,0,723	0/0:30,0:30:81.28:0,81,2123	0/0:22,0:22:63.21:0,63,1580	1/1:2,10:12:36.12:660,36,0	1/1:1,8:9:24.07:412,24,0	1/1:4,15:18:18.06:331,18,0	0/0:23,0:23:66.20:0,66,1626	0/0:18,0:18:54.19:0,54,1315	0/0:26,0:26:66.23:0,66,1740	1/1:0,15:15:42.14:772,42,0	1/1:6,14:20:48.15:853,48,0	1/1:6,18:23:57.20:1032,57,0	1/1:1,3:4:9.03:166,9,0
chr10	57209182	.	CT	C	2340.76	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=12.247;DP=527;FS=9.281;HRun=12;HaplotypeScore=97.0704;InbreedingCoeff=0.9273;MQ=62.76;MQ0=4;MQRankSum=-11.993;QD=12.65;ReadPosRankSum=-0.786;VQSLOD=2.6239;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,2:36:55.56:0,56,912	0/0:8,0:8:20.97:0,21,195	0/0:4,0:4:4.12:0,4,18	0/0:12,0:13:16.54:0,17,100	0/0:19,0:21:44.72:0,45,423	0/0:13,0:14:29.89:0,30,288	0/0:11,0:11:8.95:0,9,198	0/0:32,1:33:60.89:0,61,779	1/1:2,14:16:35.85:278,36,0	1/1:6,11:18:31.90:238,32,0	1/1:6,21:27:40.80:307,41,0	0/0:20,1:21:27.63:0,28,427	0/0:20,0:20:42.07:0,42,419	0/0:19,0:19:44.93:0,45,413	1/1:3,14:18:34.89:261,35,0	0/0:12,1:14:4.87:0,5,191	0/0:32,1:32:46.95:0,47,640	0/0:21,1:23:20.55:0,21,347	1/1:3,11:14:34.59:249,35,0	1/1:4,8:11:14.93:116,15,0	1/1:8,7:14:8.74:69,9,0	0/0:24,0:24:39.03:0,39,384	0/0:16,1:19:18.62:0,19,334	0/0:25,0:27:41.63:0,42,522	1/1:4,11:15:32.86:255,33,0	1/1:5,12:19:40.25:292,40,0	1/1:2,22:22:56.78:441,57,0	1/1:1,3:5:8.01:52,8,0
chr10	57210203	.	ATAGG	A	6501.97	PASS	AC=36;AF=0.692;AN=52;BaseQRankSum=7.395;DP=612;FS=0.000;HRun=0;HaplotypeScore=156.9005;InbreedingCoeff=0.8460;MQ=48.95;MQ0=7;MQRankSum=-2.384;QD=17.34;ReadPosRankSum=4.390;VQSLOD=4.5515;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,147,2626	0/0:8,0:8:12.51:0,13,172	0/0:26,0:17:5.67:0,6,399	0/0:29,0:20:48.10:0,48,786	0/0:27,0:27:68.50:0,69,972	1/1:16,3:19:33.10:501,33,0	1/1:19,0:19:26.55:389,27,0	0/0:32,0:30:87.21:0,87,1407	1/1:18,0:17:12.02:119,12,0	1/1:21,0:20:36.11:484,36,0	1/1:21,0:21:6.01:63,6,0	1/1:21,2:22:51.03:703,51,0	0/0:17,0:17:45.11:0,45,936	0/0:29,0:29:84.14:0,84,1422	1/1:17,0:16:3.01:30,3,0	1/1:10,3:12:24.07:373,24,0	1/1:27,0:26:60.16:871,60,0	1/1:17,0:18:39.12:538,39,0	1/1:18,0:17:36.06:451,36,0	1/1:14,0:13:3.01:31,3,0	1/1:18,1:19:0.73:45,1,0	1/1:22,0:21:39.09:528,39,0	./.	1/1:28,1:29:30.06:485,30,0	1/1:18,0:18:9.02:90,9,0	1/1:30,0:30:47.60:563,48,0	1/1:29,0:28:24.05:238,24,0	./.
chr10	57210204	.	TAGGTAGATAGACAGACAGACAGAC	T	11420.26	PASS	AB=1.000;AC=36;AF=0.667;AN=54;BaseQRankSum=13.969;DP=608;FS=3.992;HRun=0;HaplotypeScore=310.8137;InbreedingCoeff=0.7129;MQ=48.94;MQ0=7;MQRankSum=-2.996;QD=29.82;ReadPosRankSum=1.540;VQSLOD=3.2462;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,150,9220	0/0:8,0:8:21.07:0,21,837	0/0:25,0:17:5.72:0,6,640	0/0:29,0:20:48.16:0,48,1194	0/0:27,0:27:68.79:0,69,2908	1/1:19,0:19:21.23:602,21,0	1/1:18,0:18:22.88:218,23,0	0/0:32,0:30:90.31:0,90,2372	1/1:0,18:17:12.04:790,12,0	1/1:1,20:20:48.16:1445,48,0	1/1:1,20:21:6.02:393,6,0	1/1:23,0:22:25.85:586,26,0	0/0:16,0:16:45.15:0,45,3860	0/0:30,0:30:87.27:0,87,5502	1/1:0,17:16:3.01:197,3,0	1/1:13,0:12:24.47:357,24,0	1/1:27,0:26:35.36:387,35,0	0/1:18,0:18:34.69:183,0,35	1/1:2,15:16:45.13:1020,45,0	1/1:0,14:13:3.01:197,3,0	1/1:19,0:19:4.49:161,4,0	1/1:22,0:21:41.71:399,42,0	1/1:12,0:12:3.01:51,3,0	0/1:28,0:28:3.08:223,0,3	1/1:0,18:18:9.03:592,9,0	1/1:2,28:30:65.61:2040,66,0	1/1:0,28:27:24.08:1579,24,0	./.
chr10	57210212	.	TAGACAGACAGACAGAC	T	6115.53	PASS	AC=38;AF=0.731;AN=52;BaseQRankSum=10.958;DP=585;FS=18.227;HRun=0;HaplotypeScore=254.0479;InbreedingCoeff=0.7434;MQ=48.47;MQ0=8;MQRankSum=-6.074;QD=16.62;ReadPosRankSum=-1.596;VQSLOD=2.2024;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:92.99:0,93,5694	0/0:4,0:6:6.02:0,6,258	./.	0/0:23,0:18:0:0,0,0	0/0:28,0:28:32.40:0,32,1717	1/1:13,3:16:24.08:562,24,0	1/1:16,0:16:8.79:121,9,0	0/0:30,0:27:8.82:0,9,158	1/1:18,0:17:12.04:463,12,0	1/1:22,0:21:18.62:486,19,0	1/1:20,0:20:6.02:230,6,0	1/1:18,2:19:18.06:417,18,0	0/0:14,0:14:36.11:0,36,2468	0/0:34,0:34:69.24:0,69,4025	1/1:17,0:16:3.01:116,3,0	1/1:10,3:12:15:329,15,0	1/1:24,0:23:9.92:135,10,0	1/1:18,0:18:9.02:147,9,0	1/1:17,0:17:11.83:231,12,0	1/1:14,0:13:3.01:115,3,0	1/1:15,0:16:3.01:57,3,0	1/1:20,0:18:9.03:157,9,0	1/1:12,1:13:9.03:138,9,0	1/1:29,1:30:17.79:345,18,0	1/1:18,0:18:9.03:347,9,0	1/1:28,0:28:32.74:795,33,0	1/1:28,0:27:24.08:925,24,0	./.
chr10	57210550	.	GA	G	1351.14	PASS	AB=0.750;AC=18;AF=0.333;AN=54;BaseQRankSum=-0.938;DP=403;FS=20.485;HRun=9;HaplotypeScore=54.3257;InbreedingCoeff=0.7114;MQ=40.12;MQ0=44;MQRankSum=-0.686;QD=8.89;ReadPosRankSum=2.868;VQSLOD=0.4820;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:15:11.99:0,12,124	0/0:8,0:8:9.03:0,9,104	0/0:34,0:7:8.82:0,9,56	0/1:38,2:6:7.73:8,0,24	0/0:23,0:23:18:0,18,184	1/1:5,14:18:39.02:356,39,0	1/1:3,6:7:12:109,12,0	0/0:14,0:6:18.05:0,18,208	0/0:14,0:12:8.77:0,9,104	0/0:9,0:7:12.04:0,12,138	0/0:9,0:9:15.04:0,15,173	1/1:0,11:10:24.01:219,24,0	0/0:9,0:8:6.02:0,6,69	0/0:12,0:12:9.03:0,9,104	0/0:10,0:7:6.02:0,6,69	1/1:2,9:9:20.99:192,21,0	0/1:4,13:11:10.24:168,0,10	1/1:0,8:6:15.01:136,15,0	0/0:8,0:5:8.99:0,9,90	0/0:18,0:17:23.99:0,24,247	0/0:8,0:4:2.97:0,3,20	1/1:2,7:7:12:110,12,0	1/1:1,13:14:17.99:164,18,0	1/1:5,7:7:9:82,9,0	0/0:12,0:10:18.44:0,18,179	0/0:23,0:18:36.11:0,36,414	0/0:14,0:12:17.98:0,18,174	./.
chr10	57210734	.	TA	T	745.79	PASS	AB=0.851;AC=20;AF=0.357;AN=56;BaseQRankSum=0.482;DP=432;FS=2.772;HRun=16;HaplotypeScore=52.2904;InbreedingCoeff=0.5147;MQ=64.16;MQ0=2;MQRankSum=-0.105;QD=3.93;ReadPosRankSum=4.673;VQSLOD=0.0809;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,4:31:6.36:0,6,257	0/0:5,0:7:14.82:0,15,112	0/0:25,0:7:8.39:0,8,71	0/1:11,1:9:5.31:5,0,14	0/1:14,2:18:21.92:22,0,73	1/1:14,12:27:1.38:106,1,0	1/1:5,10:14:17.61:108,18,0	0/0:26,2:27:2.91:0,3,123	0/0:7,0:13:11.52:0,12,68	0/0:5,0:7:8.68:0,9,54	0/0:5,0:10:12.13:0,12,70	1/1:7,10:18:17.44:108,17,0	0/0:13,1:14:5.83:0,6,134	0/0:8,2:10:5.95:0,6,44	0/1:7,0:12:0.06:0,0,40	1/1:9,8:18:3.23:124,3,0	1/1:4,16:23:29.05:161,29,0	1/1:3,12:15:19.51:137,20,0	0/0:9,0:16:26.97:0,27,176	0/0:10,0:17:24.76:0,25,159	0/0:4,0:8:8.83:0,9,65	1/1:4,2:6:2.85:18,3,0	1/1:5,5:10:14.56:90,15,0	0/1:8,7:15:9.31:46,0,9	0/0:4,0:9:8.68:0,9,50	0/0:8,1:16:6.80:0,7,122	0/0:7,0:17:9.71:0,10,64	0/0:9,0:11:8.79:0,9,58
chr10	57210962	.	CAT	C	2105.61	PASS	AB=0.947;AC=16;AF=0.286;AN=56;BaseQRankSum=-2.841;DP=597;FS=29.117;HRun=0;HaplotypeScore=100.7496;InbreedingCoeff=-0.2416;MQ=48.39;MQ0=22;MQRankSum=3.491;QD=7.36;ReadPosRankSum=-5.553;VQSLOD=-0.0504;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,4:24:47.02:0,47,789	0/1:6,0:6:17:17,0,33	0/0:33,0:6:11.07:0,11,124	0/0:44,0:14:10.62:0,11,228	0/0:25,0:25:51.86:0,52,888	0/0:21,0:21:12.18:0,12,73	0/0:20,0:20:34.20:0,34,259	0/1:36,0:35:99:99,0,303	0/1:19,0:19:92.65:93,0,153	1/1:14,1:15:10.87:321,11,0	0/1:17,2:19:49.85:162,0,50	0/1:15,0:15:5.96:6,0,142	0/0:18,0:18:38.25:0,38,626	0/0:20,0:20:51.49:0,51,685	0/1:14,1:15:99:125,0,124	0/0:16,0:16:26.54:0,27,187	0/0:25,0:25:8.14:0,8,37	0/0:30,0:30:19.56:0,20,194	0/1:5,1:5:21.64:80,0,22	0/1:23,2:24:41.65:263,0,42	0/1:33,1:32:99:296,0,172	0/1:6,0:5:17.09:19,0,17	0/0:17,0:14:20.58:0,21,149	0/0:15,0:15:8.98:0,9,72	0/1:20,2:22:99:135,0,200	0/1:40,2:38:99:475,0,133	0/1:14,1:13:82.15:106,0,82	0/1:9,2:11:63.28:71,0,63
chr10	57210964	.	TACACAC	T	2173.47	PASS	AB=0.702;AC=14;AF=0.250;AN=56;BaseQRankSum=-0.314;DP=591;FS=6.426;HRun=0;HaplotypeScore=135.9816;InbreedingCoeff=0.6163;MQ=48.37;MQ0=22;MQRankSum=-8.140;QD=13.58;ReadPosRankSum=3.361;VQSLOD=2.4062;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:25:46.95:0,47,1291	0/0:3,0:6:14.57:0,15,211	0/0:34,0:7:12.04:0,12,206	0/0:46,0:12:5.05:0,5,58	0/0:21,0:24:48.15:0,48,1366	1/1:4,14:21:34:654,34,0	0/1:15,6:21:13.25:177,0,13	0/0:19,0:36:74.45:0,74,801	0/0:18,0:18:33.11:0,33,1006	0/0:14,0:14:24.05:0,24,381	0/0:19,0:19:24.01:0,24,491	1/1:6,7:13:12.04:240,12,0	0/0:17,0:18:30.10:0,30,900	0/0:19,0:19:33.11:0,33,1026	0/0:15,0:15:33.11:0,33,952	0/1:8,7:16:3.91:333,0,4	1/1:8,16:24:11.89:252,12,0	0/1:16,12:30:11.35:211,0,11	0/0:8,0:7:17.88:0,18,289	0/0:24,0:23:34.80:0,35,600	0/0:33,0:31:60.05:0,60,1523	1/1:2,3:5:11.07:195,11,0	0/1:8,6:12:0.93:276,0,1	1/1:7,7:14:0.88:2,1,0	0/0:22,0:22:42.14:0,42,1177	0/0:43,0:39:80.50:0,80,1869	0/0:14,0:12:30.06:0,30,712	0/0:11,0:11:14.77:0,15,403
chr10	57212535	.	GAGA	G	1337.19	PASS	AB=0.952;AC=14;AF=0.250;AN=56;BaseQRankSum=7.676;DP=532;FS=24.671;HRun=0;HaplotypeScore=107.3398;InbreedingCoeff=-0.1739;MQ=73.98;MQ0=4;MQRankSum=-3.590;QD=5.39;ReadPosRankSum=5.578;VQSLOD=0.4201;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:87.94:0,88,1342	0/0:9,0:9:11.80:0,12,139	0/0:24,0:16:25.37:0,25,391	0/0:16,0:10:11.97:0,12,102	0/0:27,0:28:81.06:0,81,1396	0/0:18,0:18:14.23:0,14,173	0/0:26,0:26:47.71:0,48,245	0/0:15,0:15:3.11:0,3,166	0/1:16,1:17:60.25:197,0,60	0/1:16,2:19:52.59:162,0,53	0/1:13,1:14:69.52:70,0,89	0/0:17,0:17:22.85:0,23,230	0/0:14,0:14:38.40:0,38,509	0/0:11,0:11:33.05:0,33,457	0/1:23,0:23:29.29:160,0,29	0/0:19,0:19:44.11:0,44,250	0/1:37,1:39:53.30:53,0,325	0/0:16,0:16:20.93:0,21,196	0/1:15,1:15:65.87:66,0,70	0/1:18,3:21:96.23:227,0,96	0/1:17,0:17:43.89:44,0,103	0/0:15,0:16:42.91:0,43,325	0/0:17,0:17:31.74:0,32,206	0/1:13,0:12:22.99:23,0,79	0/1:15,0:15:38.37:106,0,38	0/1:27,1:28:38.13:236,0,38	0/1:20,1:21:99:104,0,108	1/1:5,0:5:10.92:49,11,0
chr10	57212537	.	GAAA	G	4297.32	PASS	AB=0.698;AC=27;AF=0.482;AN=56;BaseQRankSum=-5.422;DP=541;FS=1.522;HRun=15;HaplotypeScore=99.7111;InbreedingCoeff=0.6189;MQ=72.28;MQ0=4;MQRankSum=-2.529;QD=14.87;ReadPosRankSum=3.022;VQSLOD=3.8202;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:42:76.14:0,76,1313	0/1:8,0:9:3.51:27,0,4	0/0:24,0:15:21.41:0,21,271	0/0:16,0:9:3.34:0,3,45	0/0:26,0:31:84.19:0,84,1307	0/0:5,0:18:21.53:0,22,66	0/0:8,0:27:28.37:0,28,93	0/1:8,2:16:43.95:44,0,66	1/1:6,11:17:17.78:412,18,0	1/1:6,13:19:44.99:476,45,0	1/1:6,8:14:20.90:235,21,0	0/0:10,0:17:13.74:0,14,63	0/0:16,0:16:42.11:0,42,689	0/0:10,0:10:24.08:0,24,415	1/1:3,20:24:46.41:535,46,0	0/0:7,0:19:17.94:0,18,56	0/1:10,3:39:74.73:115,0,75	0/1:7,1:17:14.70:15,0,49	1/1:3,9:14:31.01:304,31,0	1/1:4,13:18:37.41:420,37,0	1/1:5,10:17:8.55:142,9,0	0/0:8,0:15:13.47:0,13,88	0/0:6,0:17:11.21:0,11,26	0/1:8,1:12:19.10:19,0,50	1/1:3,11:16:26.93:315,27,0	1/1:5,23:29:67.49:752,67,0	1/1:6,14:21:28.68:334,29,0	1/1:0,4:5:14.98:152,15,0
chr10	57213708	.	A	AACACAC	2702.05	PASS	AB=0.946;AC=36;AF=0.720;AN=50;BaseQRankSum=-0.972;DP=481;FS=0.000;HRun=0;HaplotypeScore=125.8427;InbreedingCoeff=0.4132;MQ=59.87;MQ0=13;MQRankSum=-0.362;QD=7.79;ReadPosRankSum=-1.063;VQSLOD=2.1438;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:36,0:34:24.03:508,24,0	1/1:4,0:4:6.02:121,6,0	./.	./.	1/1:17,0:16:6.02:118,6,0	0/1:13,0:18:99:100,0,105	0/1:14,0:14:16.76:35,0,17	1/1:17,0:17:3.86:23,4,0	1/1:24,0:22:6.02:172,6,0	1/1:20,0:20:15.52:459,16,0	0/1:11,0:11:0:0,0,0	1/1:10,2:13:3.48:97,3,0	0/0:11,0:11:5.99:0,6,120	0/0:17,0:17:15.01:0,15,241	0/1:18,0:17:0:1,0,0	0/0:7,0:12:4.35:0,4,28	0/0:13,0:23:7.43:0,7,68	0/0:16,0:22:8.66:0,9,90	1/1:14,0:14:5.93:98,6,0	1/1:13,0:13:6.01:68,6,0	./.	1/1:7,0:10:3.01:38,3,0	1/1:18,0:18:5.99:60,6,0	1/1:18,0:28:5.77:76,6,0	1/1:23,0:21:5.66:154,6,0	1/1:16,0:16:15.14:280,15,0	1/1:23,0:23:15.45:366,15,0	1/1:8,0:5:3.01:75,3,0
chr10	57213959	.	T	TGA	1090.75	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=-1.462;DP=593;FS=0.000;HRun=0;HaplotypeScore=97.1898;InbreedingCoeff=0.5400;MQ=70.46;MQ0=3;MQRankSum=0.476;QD=8.87;ReadPosRankSum=-1.675;VQSLOD=2.8192;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:33:81.07:0,81,948	1/1:1,10:12:27.09:437,27,0	0/0:30,0:18:28.84:0,29,298	0/0:33,0:22:22.30:0,22,209	0/0:25,0:25:45.14:0,45,548	0/0:28,0:28:63.20:0,63,768	0/0:9,0:9:21.05:0,21,244	1/1:9,16:25:48.15:732,48,0	0/1:17,0:17:2.43:2,0,85	0/0:24,0:24:43.49:0,43,360	0/1:13,0:13:14.70:22,0,15	0/0:12,0:12:27.08:0,27,329	0/0:14,0:14:33.09:0,33,391	0/0:22,0:22:57.15:0,57,668	0/0:16,0:16:5.95:0,6,73	0/0:19,0:19:51.16:0,51,622	0/0:18,0:18:45.14:0,45,549	0/0:18,0:18:19.96:0,20,433	0/0:31,0:31:64.10:0,64,651	1/1:18,0:18:3.90:24,4,0	0/0:20,0:20:14.75:0,15,151	0/0:18,0:18:8.65:0,9,442	0/0:26,0:26:57.16:0,57,677	0/0:27,0:27:57.16:0,57,679	0/0:25,0:25:6.28:0,6,76	0/0:22,0:22:44.90:0,45,316	0/1:37,0:37:17.82:18,0,219	1/1:1,0:1:0.47:1,0,0
chr10	57213976	.	C	CAG	6619.29	PASS	AB=0.786;AC=22;AF=0.393;AN=56;BaseQRankSum=-11.820;DP=626;FS=10.578;HRun=0;HaplotypeScore=82.7029;InbreedingCoeff=0.7963;MQ=62.96;MQ0=4;MQRankSum=0.455;QD=25.07;ReadPosRankSum=2.462;VQSLOD=4.9825;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:81.23:0,81,981	0/1:13,0:13:2.51:3,0,63	0/0:35,0:17:23.68:0,24,247	0/0:31,0:20:4.54:0,5,194	0/0:24,0:24:54.17:0,54,662	0/0:26,0:28:63.03:0,63,751	0/0:10,0:10:24.08:0,24,295	0/0:21,0:21:25.77:0,26,191	1/1:3,14:17:33.11:538,33,0	1/1:10,21:31:29.32:957,29,0	1/1:0,12:12:24.08:391,24,0	0/0:14,0:14:33.05:0,33,376	0/0:18,0:18:48.15:0,48,588	0/0:23,0:23:35.22:0,35,668	1/1:3,16:23:33.11:538,33,0	0/0:20,0:20:42.13:0,42,517	0/0:18,0:18:39.12:0,39,479	0/0:20,0:20:38.12:0,38,461	1/1:20,14:34:8.20:592,8,0	1/1:0,19:19:48.16:782,48,0	1/1:6,17:23:39.13:636,39,0	0/0:16,0:16:36.09:0,36,443	0/0:22,0:23:57:0,57,665	0/0:26,0:26:54.15:0,54,651	1/1:3,22:25:45.15:734,45,0	1/1:9,15:24:2.86:625,3,0	0/1:9,27:36:13.40:774,0,13	1/1:1,4:7:3.01:49,3,0
chr10	57214293	.	AG	A	1329.85	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.631;DP=712;FS=0.631;HRun=2;HaplotypeScore=68.1648;InbreedingCoeff=0.9978;MQ=84.62;MQ0=0;MQRankSum=-1.664;QD=38.00;ReadPosRankSum=-2.438;VQSLOD=3.2672;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,126,1957	1/1:0,13:13:39.13:545,39,0	0/0:24,0:24:60.82:0,61,994	0/0:21,0:21:62.57:0,63,903	0/0:30,0:30:90.27:0,90,1388	0/0:24,0:24:72.23:0,72,1128	0/0:26,0:26:78.25:0,78,1223	1/1:0,22:22:66.21:906,66,0	0/0:33,0:33:96.25:0,96,1434	0/0:29,0:29:87.29:0,87,1370	0/0:20,0:20:57.19:0,57,896	0/0:33,0:33:99:0,99,1582	0/0:31,0:31:90.26:0,90,1371	0/0:25,0:25:75.24:0,75,1173	0/0:22,0:22:66.20:0,66,1007	0/0:22,0:22:66.18:0,66,985	0/0:37,0:37:99:0,111,1749	0/0:17,0:17:48.12:0,48,739	0/0:21,0:20:63.20:0,63,953	0/0:13,0:13:36.10:0,36,529	0/0:47,0:47:99:0,138,2195	0/0:25,0:25:75.26:0,75,1198	0/0:19,0:19:57.18:0,57,882	0/0:34,0:34:99:0,102,1630	0/0:19,0:19:48.16:0,48,755	0/0:29,0:29:84.22:0,84,1262	0/0:27,0:26:81.22:0,81,1216	0/0:7,0:7:21.07:0,21,332
chr10	57214662	.	TAC	T	728.52	PASS	AB=0.954;AC=18;AF=0.321;AN=56;BaseQRankSum=7.828;DP=635;FS=26.423;HRun=0;HaplotypeScore=130.6479;InbreedingCoeff=-0.4545;MQ=54.44;MQ0=7;MQRankSum=-2.915;QD=2.20;ReadPosRankSum=-1.026;VQSLOD=0.9055;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,150,2731	0/1:6,0:6:18.88:19,0,39	0/0:29,1:18:37.86:0,38,694	0/0:33,0:18:45.57:0,46,799	0/0:29,0:29:83.53:0,84,1470	0/1:16,1:17:28.25:28,0,228	0/1:25,0:25:20.42:20,0,319	0/1:27,0:23:18.62:19,0,857	0/1:13,10:23:17.69:18,0,205	0/1:13,11:24:99:169,0,517	0/0:17,8:25:30.10:0,30,482	0/1:10,0:9:36.88:37,0,86	0/0:36,0:36:99:0,108,2011	0/0:33,0:33:99:0,99,1893	0/1:30,0:29:48.97:49,0,248	0/1:20,0:20:8.91:9,0,218	0/0:10,9:19:24.14:0,24,314	0/1:6,0:6:4.92:5,0,216	0/1:16,2:16:78.93:79,0,498	0/0:24,0:24:12.37:0,12,458	0/0:17,7:24:20.63:0,21,347	0/1:19,1:20:9.20:9,0,160	0/1:14,0:14:27.59:28,0,141	0/1:19,0:19:52.31:52,0,410	0/1:26,0:26:75.49:118,0,75	0/1:30,0:30:99:174,0,733	0/1:11,0:11:41.58:42,0,182	0/1:5,0:5:12.98:13,0,86
chr10	57217180	.	A	AACACAC	7397.04	PASS	AC=44;AF=0.846;AN=52;BaseQRankSum=0.731;DP=529;FS=5.382;HRun=0;HaplotypeScore=132.7533;InbreedingCoeff=0.7846;MQ=55.97;MQ0=7;MQRankSum=-2.733;QD=18.35;ReadPosRankSum=-2.359;VQSLOD=3.5161;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:24.80:0,25,844	1/1:6,0:6:9:89,9,0	./.	./.	0/0:19,0:19:5.61:0,6,301	1/1:12,0:21:5.23:116,5,0	1/1:6,0:14:10.49:167,10,0	1/1:27,0:24:15.04:194,15,0	1/1:9,5:18:18.03:393,18,0	1/1:8,0:17:35.21:588,35,0	1/1:10,10:20:9.03:239,9,0	1/1:9,0:17:5.89:76,6,0	0/0:8,0:11:15.05:0,15,285	0/0:19,0:18:29.77:0,30,440	1/1:13,3:19:15.05:403,15,0	1/1:10,0:20:21.07:274,21,0	1/1:12,0:22:20.19:249,20,0	1/1:10,0:21:21.07:278,21,0	1/1:14,0:13:12.92:251,13,0	1/1:5,11:18:24.08:637,24,0	1/1:19,0:18:17.41:328,17,0	1/1:15,0:16:14.14:220,14,0	1/1:5,0:16:9.49:156,9,0	1/1:15,0:25:21.04:269,21,0	1/1:11,5:17:9.02:248,9,0	1/1:23,0:23:42.02:884,42,0	1/1:14,7:25:45.62:1151,46,0	1/1:1,1:3:6.02:189,6,0
chr10	57217725	.	A	AT	3139.88	PASS	AB=0.777;AC=41;AF=0.732;AN=56;BaseQRankSum=2.322;DP=522;FS=2.886;HRun=15;HaplotypeScore=88.6564;InbreedingCoeff=0.2458;MQ=76.86;MQ0=17;MQRankSum=-2.919;QD=6.92;ReadPosRankSum=-1.491;VQSLOD=2.6146;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,1:40:32.11:0,32,343	1/1:4,1:11:23.25:140,23,0	0/1:36,0:21:16.15:16,0,44	0/1:25,0:17:5.58:6,0,24	0/1:16,2:23:1.94:2,0,176	0/1:10,6:15:27.07:124,0,27	0/1:7,9:16:23.93:147,0,24	1/1:15,2:30:40.46:236,40,0	1/1:4,0:9:14.76:74,15,0	1/1:11,0:12:14.89:80,15,0	1/1:13,0:17:23.07:129,23,0	0/1:8,3:11:27.22:109,0,27	0/0:11,0:13:21.58:0,22,119	0/0:15,0:15:26.11:0,26,154	1/1:10,1:13:13.23:86,13,0	1/1:2,0:9:14.20:71,14,0	1/1:13,2:25:37.11:211,37,0	1/1:8,4:11:12.57:135,13,0	1/1:11,5:29:55.19:334,55,0	1/1:9,0:20:37.36:200,37,0	1/1:3,1:5:5.84:39,6,0	0/1:6,10:18:25.05:156,0,25	0/1:7,8:16:7.01:143,0,7	0/1:7,8:15:7.34:206,0,7	1/1:6,0:17:32.25:163,32,0	1/1:14,0:26:47.43:263,47,0	1/1:15,1:16:9.99:100,10,0	1/1:6,1:18:28.53:148,29,0
chr10	57218395	.	ACCCTCCT	A	4648.27	PASS	AB=0.579;AC=21;AF=0.375;AN=56;BaseQRankSum=11.038;DP=415;FS=5.497;HRun=0;HaplotypeScore=102.5177;InbreedingCoeff=0.9529;MQ=72.87;MQ0=0;MQRankSum=-7.852;QD=43.44;ReadPosRankSum=1.077;VQSLOD=4.0840;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:93.25:0,93,3443	0/0:10,0:10:29.60:0,30,947	0/0:17,0:17:20.21:0,20,1206	0/0:21,0:20:45.15:0,45,1499	0/0:11,0:11:30.10:0,30,1102	0/0:15,0:15:44.94:0,45,1596	0/0:25,0:25:66.23:0,66,2281	0/0:19,0:19:48.15:0,48,1458	1/1:1,4:5:12.04:312,12,0	1/1:0,6:6:15.03:333,15,0	1/1:1,13:14:24.01:562,24,0	0/0:11,0:11:30.10:0,30,1166	0/0:14,0:14:39.13:0,39,1482	0/0:16,0:16:42.11:0,42,1419	1/1:1,6:7:9.03:233,9,0	0/0:11,0:11:30.10:0,30,1199	0/0:29,0:28:81.75:0,82,3130	0/0:15,0:15:42.14:0,42,1532	1/1:4,6:10:18.02:263,18,0	1/1:0,11:11:26.93:578,27,0	0/1:3,8:11:0:0,0,0	0/0:13,0:13:39.13:0,39,1509	0/0:16,0:16:48.12:0,48,1769	0/0:29,0:29:86.40:0,86,2727	1/1:2,9:11:24.01:536,24,0	1/1:1,12:13:30.08:672,30,0	1/1:1,13:14:30.10:770,30,0	1/1:0,5:5:15.05:388,15,0
chr10	57220002	.	A	AG	5252.02	PASS	AC=38;AF=0.704;AN=54;BaseQRankSum=-2.634;DP=283;FS=5.233;HRun=0;HaplotypeScore=32.3358;InbreedingCoeff=0.8727;MQ=42.04;MQ0=4;MQRankSum=-5.517;QD=31.64;ReadPosRankSum=4.595;VQSLOD=4.5150;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:69.20:0,69,929	0/0:5,0:5:15.05:0,15,210	0/0:10,0:2:6.02:0,6,84	0/0:15,0:2:6.02:0,6,84	0/0:19,0:19:48.16:0,48,669	1/1:1,6:7:12.04:191,12,0	1/1:1,6:7:9.03:143,9,0	0/0:25,0:22:63.21:0,63,881	1/1:0,4:4:12.04:191,12,0	1/1:0,8:7:21.07:327,21,0	1/1:0,5:5:12.04:190,12,0	1/1:0,5:5:12.04:177,12,0	0/0:5,0:5:12.04:0,12,162	0/0:10,0:10:24.08:0,24,334	1/1:1,9:10:27.09:428,27,0	1/1:0,9:9:15.05:239,15,0	1/1:1,10:10:15.05:237,15,0	1/1:0,5:5:9.03:144,9,0	1/1:2,8:8:18.06:287,18,0	1/1:1,13:14:27.09:429,27,0	./.	1/1:0,4:4:9.03:143,9,0	1/1:0,6:6:9.03:143,9,0	1/1:2,8:9:6.32:121,6,0	1/1:0,14:14:27.09:430,27,0	1/1:0,11:11:30.10:476,30,0	1/1:0,11:10:24.08:383,24,0	1/1:1,14:13:36.12:573,36,0
chr10	57220135	.	T	TA	4528.91	PASS	AB=0.728;AC=22;AF=0.393;AN=56;BaseQRankSum=-9.053;DP=525;FS=11.023;HRun=10;HaplotypeScore=53.9674;InbreedingCoeff=0.8548;MQ=60.37;MQ0=2;MQRankSum=1.257;QD=21.46;ReadPosRankSum=1.685;VQSLOD=5.3233;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:47:60.83:0,61,773	1/1:3,10:13:27.07:288,27,0	0/0:16,0:16:38.94:0,39,272	0/0:18,0:10:11.37:0,11,137	0/0:21,0:22:58.96:0,59,471	0/1:3,12:15:8.68:255,0,9	1/1:0,18:18:45.11:480,45,0	1/1:8,25:32:65.90:642,66,0	0/0:10,0:10:17.88:0,18,139	0/0:16,0:16:38.90:0,39,313	0/0:13,0:13:29.95:0,30,246	1/1:1,19:20:48.12:511,48,0	0/0:10,0:10:23.96:0,24,197	0/0:14,0:13:32.95:0,33,271	0/0:23,0:23:62.93:0,63,517	1/1:1,14:16:26.23:313,26,0	1/1:2,21:23:54.14:576,54,0	1/1:2,19:23:50.79:508,51,0	0/0:26,0:25:50.86:0,51,409	0/0:23,0:22:53.85:0,54,435	0/0:13,0:13:20.95:0,21,172	1/1:4,4:8:12.03:128,12,0	1/1:0,9:9:24.06:256,24,0	1/1:9,14:23:54.11:562,54,0	0/0:17,0:17:22.55:0,23,321	0/0:31,0:31:74.83:0,75,609	0/0:12,0:12:32.96:0,33,271	0/1:7,1:9:9.05:9,0,119
chr10	57226330	.	C	CCACA	13090.45	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-12.308;DP=603;FS=1.529;HRun=0;HaplotypeScore=105.9494;InbreedingCoeff=0.9974;MQ=81.20;MQ0=0;MQRankSum=-7.158;QD=55.47;ReadPosRankSum=-1.279;VQSLOD=5.9383;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:78.25:0,78,1413	0/0:10,0:10:27.08:0,27,473	0/0:14,0:14:36.10:0,36,619	0/0:20,0:20:44.48:0,44,769	0/0:16,0:16:48.16:0,48,896	0/0:16,0:16:45.15:0,45,840	0/0:30,0:30:78.27:0,78,1443	0/0:29,0:29:69.19:0,69,1140	1/1:4,20:24:51.17:1357,51,0	1/1:8,7:16:36.12:839,36,0	1/1:4,9:14:18.06:480,18,0	0/0:15,0:15:45.15:0,45,840	0/0:23,0:23:66.19:0,66,1138	0/0:25,0:25:66.23:0,66,1231	1/1:3,17:20:42.14:1120,42,0	0/0:23,0:23:69.24:0,69,1272	0/0:28,0:28:78.24:0,78,1381	0/0:29,0:29:78.27:0,78,1455	1/1:3,16:21:57.20:1477,57,0	1/1:6,15:21:42.14:1119,42,0	1/1:8,37:46:87.22:2257,87,0	0/0:11,0:11:27.07:0,27,445	0/0:10,0:10:27.08:0,27,451	0/0:38,0:38:99:0,108,2008	1/1:6,8:14:23.73:595,24,0	1/1:8,26:37:99:2339,99,0	1/1:2,12:14:39.13:1007,39,0	1/1:2,7:9:21.07:501,21,0
chr10	57229612	.	C	CGTTT	14163.80	PASS	AB=0.962;AC=23;AF=0.411;AN=56;BaseQRankSum=-16.071;DP=748;FS=0.653;HRun=0;HaplotypeScore=107.7180;InbreedingCoeff=0.9267;MQ=71.76;MQ0=1;MQRankSum=-1.014;QD=44.40;ReadPosRankSum=1.333;VQSLOD=5.4191;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,111,1779	0/0:8,0:8:14.99:0,15,197	0/0:36,0:34:62:0,62,969	0/0:24,0:23:32.18:0,32,509	0/0:28,0:28:63.17:0,63,977	0/0:20,0:20:57.06:0,57,844	0/0:23,0:23:57.18:0,57,936	0/0:23,0:23:41.99:0,42,584	1/1:5,27:32:63.22:1563,63,0	1/1:7,21:30:66.04:1441,66,0	1/1:2,21:23:63.16:1503,63,0	0/0:24,0:24:63.14:0,63,981	0/0:29,0:29:84.23:0,84,1307	0/0:26,0:26:60.19:0,60,987	1/1:10,29:39:72.25:1789,72,0	0/1:24,1:25:8.47:8,0,941	0/0:39,0:39:99:0,99,1663	0/0:14,0:14:39.12:0,39,632	1/1:8,8:17:27.05:569,27,0	1/1:5,21:26:59.96:1262,60,0	1/1:4,24:28:12.63:1443,13,0	0/0:31,0:31:68.03:0,68,1093	0/0:23,0:23:54.12:0,54,851	0/0:31,0:31:84.17:0,84,1327	1/1:4,15:20:33.11:821,33,0	1/1:8,16:27:54.15:1172,54,0	1/1:10,33:43:91.12:2240,91,0	1/1:1,7:8:15.05:352,15,0
chr10	57231038	.	A	AT	5811.89	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-8.857;DP=552;FS=0.000;HRun=8;HaplotypeScore=53.1681;InbreedingCoeff=0.9939;MQ=66.66;MQ0=0;MQRankSum=-0.008;QD=26.30;ReadPosRankSum=2.316;VQSLOD=5.4254;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,105,953	0/0:15,0:15:39.01:0,39,357	0/0:18,0:16:32.92:0,33,289	0/0:9,0:7:11.99:0,12,107	0/0:33,0:33:93.01:0,93,839	0/0:26,0:26:77.96:0,78,699	0/0:13,0:13:26.98:0,27,242	0/0:25,0:25:50.50:0,51,458	1/1:4,13:17:33.10:380,33,0	1/1:6,15:22:20.51:472,21,0	1/1:2,21:22:60.05:660,60,0	0/0:13,0:13:36.01:0,36,325	0/0:10,0:10:27.01:0,27,247	0/0:23,0:23:57:0,57,517	1/1:3,17:20:51.15:588,51,0	0/0:17,0:17:33.01:0,33,302	0/0:23,0:23:59.92:0,60,532	0/0:25,0:25:68.25:0,68,611	1/1:6,17:23:51.10:562,51,0	1/1:3,17:20:36.11:415,36,0	1/1:1,13:14:30.09:346,30,0	0/0:8,0:8:24.01:0,24,220	0/0:18,0:18:51.01:0,51,460	0/0:15,0:15:35.99:0,36,324	1/1:1,20:21:57.17:658,57,0	1/1:4,21:25:63.19:727,63,0	1/1:2,24:25:60.18:692,60,0	1/1:0,10:10:27.08:312,27,0
chr10	57231494	.	CT	C	193.74	PASS	AB=0.875;AC=13;AF=0.271;AN=48;BaseQRankSum=2.501;DP=239;FS=2.186;HRun=2;HaplotypeScore=31.2324;InbreedingCoeff=0.5090;MQ=23.60;MQ0=94;MQRankSum=-1.093;QD=3.80;ReadPosRankSum=0.752;VQSLOD=0.4522;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:7:5.43:0,5,31	0/0:4,0:4:5.98:0,6,35	./.	./.	0/0:11,0:10:9.82:0,10,68	0/1:6,1:6:0:0,0,0	1/1:9,2:6:14.92:130,15,0	0/0:8,0:5:14.91:0,15,112	0/0:5,0:4:2.37:0,2,8	0/0:7,0:7:6.32:0,6,85	0/0:8,0:6:5.27:0,5,22	1/1:5,0:2:2.99:23,3,0	0/0:5,0:3:6.02:0,6,78	0/0:2,0:2:6.02:0,6,86	0/0:7,0:7:5.16:0,5,45	1/1:3,1:1:3.01:30,3,0	1/1:8,3:8:9.49:98,9,0	1/1:1,1:1:3:26,3,0	0/0:6,0:4:7.85:0,8,54	0/0:10,0:10:20.69:0,21,138	0/0:11,0:3:4.97:0,5,17	1/1:8,1:9:2.90:22,3,0	./.	./.	0/0:7,0:5:0:0,0,0	0/0:12,0:5:9.53:0,10,61	0/0:9,0:7:4.50:0,4,23	0/0:5,0:5:2.26:0,2,19
chr10	57231495	.	TTC	T	354.05	PASS	AB=1.000;AC=23;AF=0.479;AN=48;BaseQRankSum=1.743;DP=243;FS=1.908;HRun=0;HaplotypeScore=30.4536;InbreedingCoeff=0.4337;MQ=23.19;MQ0=99;MQRankSum=-1.357;QD=3.37;ReadPosRankSum=2.624;VQSLOD=1.3846;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:7:5.93:0,6,59	0/0:4,0:4:2.53:0,3,22	./.	./.	0/0:11,0:10:9.42:0,9,90	0/0:5,2:6:0.47:0,0,1	1/1:9,2:6:14.97:165,15,0	0/0:9,0:5:14.91:0,15,112	1/1:4,0:3:2.60:10,3,0	0/0:7,0:7:12.30:0,12,89	1/1:8,0:6:3.07:12,3,0	1/1:7,0:2:3.01:32,3,0	0/0:5,0:3:6.02:0,6,108	0/0:2,0:2:6.02:0,6,117	0/1:8,0:7:0.86:1,0,35	1/1:4,0:1:3.01:43,3,0	1/1:4,7:8:8.52:80,9,0	1/1:3,0:1:3.01:44,3,0	0/0:5,0:4:7.99:0,8,48	0/0:10,0:10:5.72:0,6,134	0/1:11,0:3:3.66:17,0,4	1/1:3,6:8:2.93:40,3,0	./.	./.	1/1:7,0:5:5.67:28,6,0	0/1:12,0:5:6.98:7,0,14	1/1:10,0:7:3.68:23,4,0	0/0:5,0:5:4.78:0,5,24
chr10	57231797	.	TGGCTCTTCTACAGTCATCTCCGATACCCC	T	7550.19	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=10.239;DP=527;FS=0.000;HRun=0;HaplotypeScore=361.5130;InbreedingCoeff=0.9117;MQ=88.09;MQ0=1;MQRankSum=-6.789;QD=45.76;ReadPosRankSum=2.854;VQSLOD=2.5065;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:96.26:0,96,8832	0/0:11,0:11:27.09:0,27,3391	0/0:21,0:21:29.77:0,30,863	0/0:19,0:19:24.04:0,24,710	0/0:18,0:18:48.16:0,48,5174	0/0:22,0:22:48.15:0,48,5267	0/0:26,0:26:57.17:0,57,5739	0/0:28,0:28:45.10:0,45,1730	1/1:6,6:12:11.69:896,12,0	1/1:6,7:13:17.01:531,17,0	1/1:3,5:8:6.02:448,6,0	0/0:18,0:17:39.12:0,39,3431	0/0:11,0:11:21.06:0,21,1481	0/0:25,0:25:51.13:0,51,4690	1/1:3,13:16:15.05:1120,15,0	0/0:20,0:20:42.13:0,42,4995	0/0:36,0:36:87.28:0,87,9299	0/0:23,0:23:54.12:0,54,5534	1/1:7,10:17:26.87:603,27,0	1/1:7,9:16:3.01:224,3,0	1/1:18,0:18:11.94:139,12,0	0/0:20,0:20:42.03:0,42,3407	0/0:8,0:8:21.02:0,21,1376	0/0:13,0:12:27.09:0,27,2015	1/1:5,6:11:15.05:1118,15,0	1/1:8,17:25:34.11:1351,34,0	1/1:6,13:18:12.04:896,12,0	1/1:3,7:10:3.01:224,3,0
chr10	57232376	.	AT	A	851.04	PASS	AB=0.907;AC=13;AF=0.232;AN=56;BaseQRankSum=4.759;DP=493;FS=0.555;HRun=10;HaplotypeScore=64.4562;InbreedingCoeff=0.7862;MQ=73.28;MQ0=0;MQRankSum=0.246;QD=8.87;ReadPosRankSum=0.569;VQSLOD=2.0378;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:66.16:0,66,718	0/0:12,0:12:24.06:0,24,266	0/0:32,0:24:50.33:0,50,443	0/0:29,1:19:2.81:0,3,279	0/0:20,0:20:48.12:0,48,524	1/1:1,10:11:29.99:260,30,0	1/1:0,15:15:41.99:365,42,0	0/1:35,4:39:11.04:11,0,751	0/0:9,0:9:24.06:0,24,265	0/0:14,0:14:42.10:0,42,456	0/0:15,0:15:42.11:0,42,465	1/1:8,7:15:14.98:130,15,0	0/0:12,1:13:9.85:0,10,316	0/0:18,0:19:56.99:0,57,609	0/0:14,0:14:42.07:0,42,451	0/0:16,0:15:36.98:0,37,457	0/0:32,0:32:81.22:0,81,895	0/0:28,0:28:74.21:0,74,792	0/0:24,2:26:7.62:0,8,521	0/0:24,1:25:43.09:0,43,691	0/0:12,0:12:33.09:0,33,365	1/1:1,1:2:3:26,3,0	1/1:2,7:9:20.99:182,21,0	1/1:1,4:5:6:52,6,0	0/0:15,1:16:22.06:0,22,464	0/0:18,0:18:45.11:0,45,490	0/0:17,0:17:48.13:0,48,531	0/0:6,0:6:15.04:0,15,166
chr10	57235368	.	AAAAAC	A	16572.21	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=11.556;DP=654;FS=5.436;HRun=0;HaplotypeScore=130.1421;InbreedingCoeff=0.9925;MQ=66.88;MQ0=1;MQRankSum=-3.067;QD=36.91;ReadPosRankSum=7.998;VQSLOD=4.1022;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:75.25:0,75,1937	0/0:15,0:15:39.10:0,39,1006	0/0:24,0:19:44.60:0,45,889	0/0:36,0:30:33.28:0,33,1139	0/0:27,0:27:72.21:0,72,1812	1/1:3,32:35:68.93:1360,69,0	1/1:4,16:20:27.05:493,27,0	0/0:33,0:33:76.49:0,76,1751	1/1:2,20:22:45.15:877,45,0	1/1:5,28:33:81.28:1542,81,0	1/1:4,17:21:51.16:923,51,0	1/1:3,16:19:33.11:650,33,0	0/0:19,0:19:51.11:0,51,1168	0/0:23,0:23:66.22:0,66,1833	1/1:2,16:18:33.11:650,33,0	1/1:0,23:23:45.15:882,45,0	1/1:5,25:30:48.13:946,48,0	1/1:1,15:16:24.08:473,24,0	1/1:6,14:20:11.73:630,12,0	1/1:2,21:23:51.17:896,51,0	1/1:3,10:13:21.07:396,21,0	1/1:3,17:20:45.15:841,45,0	1/1:0,26:26:41.22:826,41,0	1/1:6,19:25:42.14:828,42,0	1/1:7,23:30:57.20:1123,57,0	1/1:6,18:24:54.16:943,54,0	1/1:2,20:22:45.15:883,45,0	1/1:0,9:9:21.07:410,21,0
chr10	57236808	.	A	AG	839.89	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=-1.739;DP=497;FS=18.954;HRun=3;HaplotypeScore=56.3666;InbreedingCoeff=0.7801;MQ=88.17;MQ0=1;MQRankSum=1.943;QD=15.00;ReadPosRankSum=-2.850;VQSLOD=1.3845;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:69.21:0,69,823	1/1:0,15:15:33.11:461,33,0	0/0:26,1:26:24.28:0,24,423	0/1:18,0:18:15.20:15,0,172	0/0:17,0:17:51.15:0,51,600	0/0:21,0:21:63.16:0,63,723	0/0:25,0:25:72.19:0,72,832	1/1:9,14:23:41.92:492,42,0	0/0:16,0:16:42.12:0,42,493	0/0:26,0:26:72.21:0,72,853	0/0:17,0:17:45.14:0,45,539	0/0:13,0:13:36.08:0,36,401	0/0:7,0:7:18.05:0,18,216	0/0:14,0:14:39.10:0,39,447	0/0:21,0:21:60.15:0,60,689	0/0:13,0:13:36.05:0,36,379	0/0:25,0:25:75.23:0,75,896	0/0:20,0:20:51.13:0,51,589	0/0:18,0:18:45.13:0,45,529	0/0:13,0:13:36.11:0,36,430	0/0:14,0:13:33.09:0,33,384	0/0:11,0:11:30.08:0,30,351	0/0:12,0:12:30.07:0,30,344	0/0:24,0:24:72.13:0,72,810	0/0:17,0:17:47.94:0,48,551	0/0:20,0:20:60.17:0,60,710	0/0:19,0:19:54.11:0,54,616	0/0:7,0:7:21.06:0,21,251
chr10	57238805	.	TC	T	908.43	PASS	AB=0.795;AC=13;AF=0.232;AN=56;BaseQRankSum=9.419;DP=676;FS=2.051;HRun=2;HaplotypeScore=123.4677;InbreedingCoeff=-0.3207;MQ=44.53;MQ0=64;MQRankSum=-0.246;QD=3.35;ReadPosRankSum=0.810;VQSLOD=0.4144;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:53,2:49:13.09:0,13,1480	0/0:7,0:5:15.05:0,15,201	0/0:68,0:14:28.50:0,29,406	0/0:74,0:22:18.42:0,18,415	0/0:21,0:20:54.17:0,54,789	0/0:19,0:15:26.55:0,27,247	0/0:28,1:28:39.98:0,40,604	0/0:19,0:13:26.78:0,27,339	0/1:23,0:22:27.42:27,0,200	0/1:11,4:15:85.19:85,0,406	0/1:11,4:14:32.77:33,0,282	0/0:14,0:10:15.62:0,16,204	0/0:26,0:25:61.51:0,62,972	0/0:20,0:19:33.47:0,33,616	0/1:11,12:22:99:132,0,343	0/0:12,0:11:26.61:0,27,242	0/1:19,2:18:35.39:35,0,282	0/0:14,0:12:16.34:0,16,293	0/1:19,5:13:65.38:65,0,218	0/1:13,7:14:82.03:82,0,183	0/1:20,17:34:99:184,0,227	0/0:15,0:10:23.71:0,24,226	0/0:12,0:6:0.90:0,1,56	0/1:19,1:18:52.72:53,0,148	0/1:18,2:17:82.12:82,0,156	0/1:20,9:25:99:147,0,457	0/1:13,7:18:96.33:96,0,395	0/1:1,3:4:36.24:39,0,36
chr10	57238826	.	T	TCTCCT	5330.59	PASS	AB=0.950;AC=25;AF=0.446;AN=56;BaseQRankSum=4.266;DP=721;FS=2.828;HRun=0;HaplotypeScore=172.3707;InbreedingCoeff=0.4265;MQ=65.67;MQ0=30;MQRankSum=-2.312;QD=12.09;ReadPosRankSum=-2.617;VQSLOD=4.2149;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:61,0:59:99:142,0,1110	0/0:7,0:5:9.03:0,9,167	0/0:69,0:31:0.36:0,0,112	0/1:86,0:50:1.50:1,0,222	0/0:27,0:26:42.13:0,42,739	0/0:17,0:15:9.39:0,9,64	0/0:33,0:33:47.80:0,48,513	0/0:21,0:19:21.03:0,21,287	0/1:12,12:24:0.95:81,0,1	1/1:19,0:19:23.98:347,24,0	0/1:15,0:15:40.58:315,0,41	0/0:15,0:13:4.22:0,4,92	0/0:25,0:24:45.20:0,45,891	0/0:21,0:20:8.29:0,8,548	1/1:22,0:21:9.27:806,9,0	0/0:13,0:13:14.67:0,15,123	0/1:33,0:31:99:106,0,229	0/0:16,0:15:3.40:0,3,185	1/1:21,0:16:20.24:392,20,0	1/1:19,0:17:18.06:476,18,0	1/1:40,0:39:36.03:695,36,0	0/0:16,0:15:17.89:0,18,149	0/1:8,0:7:19.88:20,0,32	0/1:20,0:19:71.61:72,0,120	1/1:15,0:13:12.04:337,12,0	1/1:29,0:25:39:813,39,0	1/1:24,0:24:27.06:562,27,0	1/1:3,0:3:6.02:164,6,0
chr10	57239513	.	C	CCA	237.25	PASS	AB=0.900;AC=13;AF=0.542;AN=24;BaseQRankSum=-2.730;DP=183;FS=6.557;HRun=0;HaplotypeScore=16.8598;InbreedingCoeff=0.4395;MQ=34.12;MQ0=104;MQRankSum=1.080;QD=6.98;ReadPosRankSum=1.120;VQSLOD=1.1310;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:19:23.85:0,24,232	./.	./.	./.	0/0:5,0:4:8.84:0,9,71	./.	0/0:7,0:6:14.66:0,15,113	./.	./.	./.	1/1:6,1:4:3.01:45,3,0	./.	0/1:8,1:5:32.87:33,0,73	0/0:12,0:9:21.06:0,21,231	1/1:2,1:2:6.02:89,6,0	./.	./.	./.	./.	0/0:4,0:4:3.01:0,3,32	1/1:5,1:2:3.01:45,3,0	./.	./.	./.	1/1:3,1:3:3.01:45,3,0	./.	1/1:2,1:1:3.01:45,3,0	1/1:1,1:2:3.01:45,3,0
chr10	57240709	.	GC	G	830.14	PASS	AB=0.962;AC=27;AF=0.794;AN=34;BaseQRankSum=-3.734;DP=226;FS=4.163;HRun=1;HaplotypeScore=39.7820;InbreedingCoeff=0.2373;MQ=94.99;MQ0=10;MQRankSum=-2.946;QD=5.97;ReadPosRankSum=-3.064;VQSLOD=-0.4630;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,5:6:3.01:36,3,0	./.	0/0:36,0:14:2.03:0,2,181	0/1:49,2:26:15.78:16,0,278	./.	1/1:4,7:10:5.29:53,5,0	./.	1/1:3,5:8:20.92:182,21,0	0/0:1,2:3:0.89:0,1,2	1/1:4,2:5:14.97:151,15,0	./.	0/0:0,3:3:0.89:0,1,2	1/1:0,4:4:2.43:29,2,0	1/1:5,11:16:1.83:4,2,0	./.	1/1:3,3:6:0.47:1,0,0	1/1:1,2:3:6.36:36,6,0	1/1:1,2:2:3.01:36,3,0	1/1:8,6:11:23.87:215,24,0	./.	./.	./.	./.	./.	./.	1/1:1,3:3:9.01:92,9,0	1/1:1,2:3:1.34:32,1,0	1/1:2,1:2:3.01:40,3,0
chr10	57241033	.	C	CA	1801.97	PASS	AB=0.831;AC=42;AF=0.778;AN=54;BaseQRankSum=-1.828;DP=440;FS=3.326;HRun=17;HaplotypeScore=65.5058;InbreedingCoeff=0.0344;MQ=77.54;MQ0=2;MQRankSum=0.401;QD=4.53;ReadPosRankSum=-3.018;VQSLOD=0.5262;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:22,1:23:49.98:61,0,50	./.	0/1:29,0:17:5.68:6,0,40	0/0:26,1:17:11.91:0,12,55	0/1:14,0:14:12.65:14,0,13	0/1:11,7:20:32.38:58,0,32	0/1:11,5:17:2.88:161,0,3	1/1:18,12:30:30.80:200,31,0	1/1:6,0:20:10.02:54,10,0	1/1:5,0:12:19.41:108,19,0	1/1:9,0:9:3.59:10,4,0	1/1:7,1:8:8.47:51,8,0	0/0:9,0:14:0.38:0,0,20	0/1:17,1:18:18.92:65,0,19	1/1:3,0:12:5.68:28,6,0	1/1:7,6:14:1.64:58,2,0	1/1:14,3:17:29.56:219,30,0	1/1:14,1:16:19.52:194,20,0	1/1:9,1:15:13.43:80,13,0	1/1:3,0:9:5.68:29,6,0	1/1:5,0:12:3.73:16,4,0	1/1:13,1:13:7.99:120,8,0	0/1:4,2:12:3.73:48,0,4	0/1:6,9:15:9.17:17,0,9	1/1:6,0:6:4.50:22,4,0	1/1:18,0:20:25.53:139,26,0	1/1:20,0:20:8.99:61,9,0	1/1:13,1:14:19.65:126,20,0
chr10	57241232	.	A	ACCA	629.09	PASS	AB=1.000;AC=17;AF=0.447;AN=38;BaseQRankSum=-3.811;DP=217;FS=4.854;HRun=0;HaplotypeScore=39.9204;InbreedingCoeff=0.3100;MQ=54.84;MQ0=15;MQRankSum=0.134;QD=6.99;ReadPosRankSum=-1.863;VQSLOD=1.4130;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:5.85:0,6,78	./.	./.	./.	./.	1/1:5,0:5:3.01:57,3,0	1/1:14,0:13:3.01:57,3,0	./.	0/0:7,0:6:8.86:0,9,62	./.	./.	1/1:9,0:8:9:135,9,0	0/0:3,0:3:6.01:0,6,65	0/0:8,0:8:9:0,9,100	1/1:5,0:5:2.98:21,3,0	./.	0/1:8,0:7:14.62:15,0,15	1/1:4,0:4:2.99:23,3,0	0/0:12,0:8:5.78:0,6,33	0/0:5,0:5:5.91:0,6,38	0/1:17,0:16:14.06:14,0,31	./.	1/1:2,0:2:6.02:112,6,0	1/1:12,6:18:15.52:281,16,0	0/0:10,0:9:2.65:0,3,18	0/0:7,0:7:2.98:0,3,21	0/0:3,0:3:5.94:0,6,42	0/1:7,0:6:24.08:48,0,24
chr10	57241258	.	C	CA	93.06	PASS	AB=0.907;AC=8;AF=0.148;AN=54;BaseQRankSum=2.253;DP=241;FS=2.060;HRun=0;HaplotypeScore=42.9135;InbreedingCoeff=-0.0971;MQ=69.35;MQ0=9;MQRankSum=0.123;QD=1.26;ReadPosRankSum=-2.423;VQSLOD=1.2182;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:55.40:0,55,677	./.	0/1:12,0:7:0.35:0,0,212	0/0:9,0:7:17.19:0,17,193	0/0:7,0:7:14.05:0,14,204	0/1:2,1:3:2.09:10,0,2	0/0:16,1:16:18.69:0,19,112	0/0:5,0:5:5.14:0,5,14	0/0:8,0:7:15.02:0,15,62	0/0:8,0:6:11.35:0,11,42	0/0:5,0:5:11.63:0,12,41	0/1:9,1:9:27.14:30,0,27	0/0:5,0:5:12.03:0,12,150	0/0:8,0:8:24.06:0,24,287	0/1:5,0:5:8.63:9,0,20	0/0:5,0:4:8.88:0,9,28	0/0:13,0:12:5.79:0,6,73	0/1:4,0:4:12.94:13,0,15	0/0:10,0:8:11.57:0,12,33	0/0:5,0:5:12.18:0,12,47	0/0:17,0:17:5.85:0,6,73	0/0:4,0:4:7.66:0,8,31	0/1:4,2:6:18.83:35,0,19	0/1:18,4:21:31.84:84,0,32	0/0:9,0:9:17.35:0,17,62	0/0:7,0:7:6.43:0,6,19	0/0:2,0:2:4.90:0,5,19	0/1:12,0:11:34.65:35,0,41
chr10	57241259	.	C	CCA	204.89	PASS	AB=0.932;AC=12;AF=0.222;AN=54;BaseQRankSum=1.128;DP=244;FS=3.206;HRun=0;HaplotypeScore=48.7885;InbreedingCoeff=-0.2603;MQ=74.78;MQ0=8;MQRankSum=0.197;QD=2.03;ReadPosRankSum=-3.762;VQSLOD=0.3350;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:57.99:0,58,765	./.	0/0:14,0:9:10.49:0,10,219	0/0:10,0:8:15.50:0,15,214	0/0:6,0:6:15.05:0,15,228	0/1:2,1:3:11.83:17,0,12	0/1:16,1:16:7.92:8,0,197	0/1:5,0:5:17.10:17,0,21	0/1:8,0:7:6.05:6,0,87	0/1:9,0:7:3.21:3,0,77	0/0:5,0:5:14.76:0,15,94	0/1:9,1:9:50.29:59,0,50	0/0:4,0:4:12.03:0,12,164	0/0:8,0:8:23.80:0,24,290	0/1:6,0:6:10.52:11,0,52	0/1:5,0:4:10.09:10,0,58	0/0:12,0:12:34.29:0,34,243	0/0:4,0:4:11.80:0,12,74	0/0:11,0:9:20.25:0,20,109	0/1:5,0:5:9.99:10,0,70	0/0:18,0:18:17.39:0,17,192	0/0:4,0:4:8.91:0,9,63	0/1:4,2:6:34.24:66,0,34	0/1:16,4:19:60.59:127,0,61	0/0:10,0:10:25.14:0,25,153	0/1:7,0:7:9.70:10,0,55	0/0:2,0:2:5.94:0,6,42	0/0:12,0:11:26.62:0,27,175
chr10	57241956	.	TG	T	1862.96	PASS	AB=0.827;AC=30;AF=0.577;AN=52;BaseQRankSum=0.521;DP=284;FS=1.006;HRun=2;HaplotypeScore=55.3049;InbreedingCoeff=0.2971;MQ=35.78;MQ0=28;MQRankSum=-4.405;QD=9.27;ReadPosRankSum=-0.502;VQSLOD=0.9979;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:12:19.61:0,20,240	0/0:2,1:2:6.02:0,6,80	./.	./.	0/0:6,0:5:6.02:0,6,89	0/1:10,3:11:24.50:24,0,25	0/1:19,4:15:11.18:11,0,70	0/1:7,8:14:99:166,0,120	1/1:5,5:6:8.15:84,8,0	1/1:3,8:11:33.09:395,33,0	1/1:2,2:4:3.01:39,3,0	0/0:17,2:14:13.94:0,14,76	0/0:13,0:11:22.32:0,22,310	0/0:13,0:12:15.04:0,15,204	1/1:2,5:7:15.05:185,15,0	0/1:13,0:10:18.44:18,0,55	0/1:8,1:4:11.97:33,0,12	0/1:3,2:5:20.66:23,0,21	1/1:4,6:7:15.66:153,16,0	1/1:1,4:5:6.02:77,6,0	1/1:15,9:22:12.75:169,13,0	0/1:6,2:7:8.68:9,0,35	0/0:6,2:8:7.49:0,7,26	0/1:13,2:9:0.10:18,0,0	1/1:4,6:10:12.04:149,12,0	1/1:1,7:8:18.06:225,18,0	1/1:0,2:2:6.02:73,6,0	1/1:3,6:7:15.05:190,15,0
chr10	57241964	.	T	TG	2407.11	PASS	AB=0.858;AC=46;AF=0.920;AN=50;BaseQRankSum=3.228;DP=295;FS=6.526;HRun=1;HaplotypeScore=62.4722;InbreedingCoeff=0.1517;MQ=31.25;MQ0=39;MQRankSum=-0.413;QD=8.60;ReadPosRankSum=2.669;VQSLOD=1.1510;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:13:12.04:160,12,0	./.	./.	./.	1/1:6,1:6:6.02:80,6,0	1/1:13,1:12:1.52:32,2,0	1/1:24,1:15:5.44:57,5,0	1/1:11,0:9:8.39:133,8,0	1/1:16,1:11:8.64:85,9,0	1/1:9,1:10:29.52:294,30,0	0/1:3,1:4:0:0,0,0	1/1:19,0:13:17.78:144,18,0	1/1:12,0:10:20.75:261,21,0	1/1:12,0:11:12.04:160,12,0	1/1:7,1:8:7.22:62,7,0	1/1:8,2:7:7.08:103,7,0	0/1:10,1:6:14.36:27,0,14	1/1:6,0:6:11.97:108,12,0	1/1:9,0:6:9.74:109,10,0	1/1:6,0:5:3.01:39,3,0	1/1:23,2:23:8.75:100,9,0	0/0:9,1:8:2.04:0,2,6	1/1:8,0:8:5.19:20,5,0	1/1:15,0:9:6.01:75,6,0	1/1:12,0:10:6:73,6,0	1/1:10,0:10:13.44:219,13,0	1/1:3,1:2:3.01:39,3,0	1/1:11,0:7:11.88:116,12,0
chr10	57241965	.	GT	G	2285.50	PASS	AB=0.876;AC=44;AF=0.880;AN=50;BaseQRankSum=1.295;DP=291;FS=4.829;HRun=1;HaplotypeScore=57.8213;InbreedingCoeff=0.0823;MQ=31.04;MQ0=39;MQRankSum=2.299;QD=8.31;ReadPosRankSum=3.744;VQSLOD=1.2828;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,11:12:12.04:160,12,0	./.	./.	./.	1/1:3,4:6:6.02:80,6,0	1/1:10,2:10:1.52:32,2,0	1/1:22,2:14:3.72:53,4,0	1/1:10,0:8:8.39:133,8,0	1/1:6,2:11:10.82:97,11,0	1/1:2,4:10:29.39:306,29,0	0/1:3,1:4:0:0,0,0	1/1:18,1:13:17.28:127,17,0	1/1:3,9:10:16.85:239,17,0	1/1:0,11:11:12.04:160,12,0	1/1:3,4:8:7.22:62,7,0	0/1:8,3:8:4.51:27,0,5	0/1:10,1:6:23.95:26,0,24	0/1:7,0:7:23.57:58,0,24	1/1:5,3:5:9.80:143,10,0	1/1:2,2:4:3.01:39,3,0	1/1:6,11:21:8.58:100,9,0	0/0:8,2:8:2.99:0,3,24	1/1:9,0:9:5.19:20,5,0	1/1:12,3:10:5.90:50,6,0	1/1:5,5:10:6.02:73,6,0	1/1:3,6:10:13.56:235,14,0	1/1:1,1:2:3.01:39,3,0	1/1:5,4:7:12.02:135,12,0
chr10	57241967	.	GT	G	758.70	PASS	AB=0.898;AC=32;AF=0.640;AN=50;BaseQRankSum=2.052;DP=292;FS=3.652;HRun=1;HaplotypeScore=62.1316;InbreedingCoeff=0.1773;MQ=30.33;MQ0=40;MQRankSum=-0.041;QD=3.01;ReadPosRankSum=1.177;VQSLOD=-0.1147;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:14,0:13:0:0,0,1	./.	./.	./.	0/0:7,0:6:0:0,0,1	1/1:11,1:10:0.89:2,1,0	1/1:20,4:14:5.25:76,5,0	0/1:9,1:8:21.35:49,0,21	1/1:16,1:11:10.45:82,10,0	1/1:10,0:10:21.44:162,21,0	0/1:3,1:4:0:0,0,0	1/1:12,6:12:8.92:169,9,0	0/1:13,0:11:0.73:1,0,7	0/1:11,0:10:0.07:0,0,1	1/1:8,1:9:1.60:6,2,0	0/0:11,1:9:5.61:0,6,50	0/1:9,3:7:27.94:28,0,37	0/1:6,1:7:46.18:46,0,61	1/1:7,0:4:4.52:75,5,0	0/0:5,0:4:0.47:0,0,1	1/1:22,1:21:5.07:46,5,0	0/0:8,3:9:3.01:0,3,37	0/1:7,1:7:0:0,0,0	0/1:11,4:9:0.59:1,0,1	1/1:12,0:10:0.86:2,1,0	0/1:10,1:11:18.66:89,0,19	1/1:4,0:2:1.82:5,2,0	1/1:11,0:7:8.87:35,9,0
chr10	57242027	.	GAGATATATATAGAT	G	1394.45	PASS	AB=1.000;AC=20;AF=0.625;AN=32;BaseQRankSum=-0.532;DP=327;FS=0.000;HRun=0;HaplotypeScore=77.8308;InbreedingCoeff=0.5132;MQ=68.90;MQ0=27;MQRankSum=0.917;QD=16.21;ReadPosRankSum=2.765;VQSLOD=1.3874;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:67,0:24:9.35:0,9,370	0/0:87,0:31:26.62:0,27,666	./.	0/0:6,1:7:0.47:0,0,1	1/1:13,0:11:6.75:152,7,0	0/0:5,0:5:2.88:0,3,63	./.	1/1:9,0:7:11.63:303,12,0	./.	./.	1/1:5,0:5:2.56:89,3,0	1/1:7,0:6:3.48:61,3,0	./.	1/1:8,1:8:4.62:158,5,0	0/1:5,0:2:0:0,0,0	1/1:3,0:3:2.04:6,2,0	1/1:7,0:4:5.42:26,5,0	0/0:3,0:2:0.89:0,1,2	./.	./.	./.	0/1:9,0:7:0.06:0,0,0	./.	1/1:10,0:10:20.75:498,21,0	1/1:9,0:6:8.60:210,9,0	./.
chr10	57242029	.	GATATATAT	G	1351.60	PASS	AB=0.939;AC=21;AF=0.618;AN=34;BaseQRankSum=-0.779;DP=329;FS=1.047;HRun=0;HaplotypeScore=68.5244;InbreedingCoeff=0.3808;MQ=70.11;MQ0=25;MQRankSum=1.527;QD=8.95;ReadPosRankSum=2.974;VQSLOD=1.5431;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/1:70,0:26:36.94:37,0,266	0/0:95,0:34:30.25:0,30,606	./.	0/0:3,2:7:0.47:0,0,1	1/1:3,5:11:6.86:102,7,0	0/0:5,0:5:2.88:0,3,47	./.	1/1:4,2:6:10.59:239,11,0	0/1:7,2:9:0:0,0,0	./.	1/1:0,4:4:2.83:71,3,0	1/1:4,2:5:3.48:71,3,0	./.	1/1:2,4:8:4.95:122,5,0	0/1:4,0:2:0:0,0,0	1/1:3,0:3:1.25:3,1,0	1/1:6,0:3:5.42:26,5,0	0/0:1,0:2:0.89:0,1,2	./.	./.	./.	0/0:7,1:7:0.12:0,0,0	./.	1/1:1,6:10:20.86:534,21,0	1/1:0,1:7:8.75:251,9,0	./.
chr10	57242051	.	CAG	C	74.92	PASS	AB=0.895;AC=12;AF=0.286;AN=42;BaseQRankSum=2.238;DP=367;FS=8.169;HRun=0;HaplotypeScore=67.3412;InbreedingCoeff=0.1651;MQ=66.54;MQ0=21;MQRankSum=-0.271;QD=0.45;ReadPosRankSum=2.353;VQSLOD=0.1979;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:7:2.71:0,3,13	./.	0/0:58,0:20:10.30:0,10,85	0/1:88,1:34:10.15:10,0,38	./.	0/0:10,0:10:0.89:0,1,2	0/0:15,0:15:0:0,0,0	0/0:6,0:5:4.14:0,4,23	0/1:9,1:6:0:0,0,0	0/1:8,2:8:20.91:21,0,69	0/1:7,2:7:0:0,0,0	1/1:9,0:8:0.37:1,0,0	0/0:6,0:6:3.01:0,3,36	0/0:12,0:10:8.24:0,8,89	./.	0/0:15,0:14:8.79:0,9,70	0/0:4,0:3:6.01:0,6,71	0/1:3,0:3:2.01:2,0,40	0/0:10,2:8:20.91:0,21,146	1/1:7,1:7:1.41:4,1,0	./.	./.	./.	0/0:10,0:10:0.46:0,0,1	./.	0/1:12,3:14:76.46:76,0,81	1/1:10,3:9:3.67:58,4,0	0/0:2,0:2:0.47:0,0,1
chr10	57242067	.	GAC	G	766.42	PASS	AB=0.954;AC=29;AF=0.630;AN=46;BaseQRankSum=-0.328;DP=370;FS=23.044;HRun=0;HaplotypeScore=62.2859;InbreedingCoeff=-0.0290;MQ=50.32;MQ0=22;MQRankSum=4.328;QD=2.75;ReadPosRankSum=-1.173;VQSLOD=-0.5713;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:11:2.60:11,3,0	./.	0/0:23,0:9:3.58:0,4,35	0/1:49,0:16:19.31:31,0,19	./.	1/1:10,0:10:5.57:41,6,0	1/1:13,0:12:2.83:20,3,0	0/1:14,8:19:91.20:112,0,91	1/1:10,0:8:3:25,3,0	0/1:13,0:10:44.27:61,0,44	1/1:13,0:11:9.81:67,10,0	1/1:12,0:12:5.85:44,6,0	0/1:13,0:13:34.37:34,0,70	0/1:16,0:15:10.60:11,0,83	./.	0/1:22,0:21:17.96:99,0,18	0/1:5,1:5:14.08:14,0,40	0/0:5,0:5:2.98:0,3,33	0/0:21,0:16:27.86:0,28,135	0/0:11,0:11:3.38:0,3,10	./.	./.	0/1:10,0:9:0:0,0,0	1/1:16,0:15:5.75:48,6,0	1/1:5,0:5:3:25,3,0	0/1:14,0:13:49.13:78,0,49	1/1:16,0:13:10.18:97,10,0	1/1:7,0:6:10.95:90,11,0
chr10	57242305	.	GTTTCTTTC	G	194.14	PASS	AB=0.955;AC=5;AF=0.093;AN=54;BaseQRankSum=-0.060;DP=601;FS=2.551;HRun=0;HaplotypeScore=171.6960;InbreedingCoeff=0.6154;MQ=65.17;MQ0=5;MQRankSum=-3.401;QD=2.81;ReadPosRankSum=-2.779;VQSLOD=1.8368;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:49.89:0,50,1274	1/1:5,6:11:6.02:108,6,0	0/0:20,0:15:2.60:0,3,10	./.	0/0:23,0:23:36.11:0,36,944	0/0:14,0:14:27.07:0,27,710	0/0:25,0:23:33.09:0,33,533	1/1:37,0:36:17.92:194,18,0	0/1:20,0:21:3.05:3,0,351	0/0:26,0:26:21.71:0,22,310	0/0:8,0:8:12.04:0,12,164	0/0:22,0:22:24.08:0,24,459	0/0:37,0:37:57.20:0,57,2140	0/0:25,0:25:45.15:0,45,1157	0/0:24,0:24:18.77:0,19,422	0/0:26,0:26:3.58:0,4,213	0/0:23,0:23:32.58:0,33,544	0/0:26,0:26:24.08:0,24,497	0/0:11,0:11:6.93:0,7,56	0/0:24,0:24:35.98:0,36,495	0/0:10,0:10:15.04:0,15,217	0/0:17,0:17:24.07:0,24,628	0/0:24,0:24:45.15:0,45,1366	0/0:28,0:28:42.06:0,42,1034	0/0:16,0:15:19.79:0,20,268	0/0:39,0:39:59.95:0,60,751	0/0:23,0:21:33.24:0,33,403	0/0:8,0:7:8.62:0,9,108
chr10	57242362	.	TTCCTTCCTTCCTTCCCTTC	T	3414.98	PASS	AB=1.000;AC=21;AF=0.404;AN=52;BaseQRankSum=9.204;DP=529;FS=0.462;HRun=0;HaplotypeScore=212.2573;InbreedingCoeff=-0.2271;MQ=43.35;MQ0=48;MQRankSum=-1.570;QD=9.90;ReadPosRankSum=2.088;VQSLOD=2.6808;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:23:33.05:0,33,1642	0/0:6,0:5:3.01:0,3,37	./.	./.	0/0:18,0:14:29.64:0,30,1030	0/1:28,0:27:86.08:86,0,645	0/1:15,0:13:50.24:50,0,179	0/0:27,0:26:71.74:0,72,1806	1/1:14,0:14:17.77:282,18,0	0/1:17,0:14:55.40:264,0,55	1/1:0,13:13:14.96:227,15,0	0/1:15,0:13:70.86:71,0,104	0/0:35,0:33:66.70:0,67,3017	0/0:22,0:22:44.39:0,44,1552	0/1:29,0:28:99:101,0,144	0/1:22,0:20:41.61:42,0,162	0/1:19,0:17:54.18:54,0,358	0/1:23,0:22:25.02:25,0,246	1/1:17,0:16:26.46:540,26,0	0/1:14,0:14:37.89:112,0,38	0/1:6,0:5:43.88:44,0,53	0/0:19,0:18:12.04:0,12,512	0/0:19,0:18:33.10:0,33,1201	0/1:33,0:26:56.03:56,0,839	0/1:19,0:17:99:151,0,105	0/1:30,0:29:83.28:705,0,83	0/1:21,0:18:72.26:329,0,72	0/1:10,0:7:49.88:277,0,50
chr10	57242366	.	TTCCTTCCTTCCCTTCTTC	T	7086.47	PASS	AB=0.965;AC=25;AF=0.481;AN=52;BaseQRankSum=6.181;DP=529;FS=2.066;HRun=0;HaplotypeScore=190.3936;InbreedingCoeff=0.0047;MQ=43.08;MQ0=48;MQRankSum=-1.267;QD=19.52;ReadPosRankSum=1.430;VQSLOD=4.0117;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:23:51.06:0,51,1305	0/0:6,0:5:2.99:0,3,24	./.	./.	0/0:18,0:14:33.09:0,33,710	0/1:29,0:28:99:130,0,460	0/1:15,0:13:77.68:147,0,78	0/0:28,0:27:71.75:0,72,1356	1/1:15,0:15:18.06:575,18,0	0/1:3,0:14:38.04:614,0,38	0/1:13,0:13:21.86:22,0,39	0/1:13,0:11:42.79:185,0,43	0/0:34,0:32:67.10:0,67,2246	0/0:21,0:21:41.14:0,41,1138	0/1:28,0:27:0.63:303,0,1	0/1:23,0:21:68.11:68,0,68	0/1:19,0:17:99:145,0,138	0/1:21,0:20:40.47:40,0,122	1/1:3,14:16:42.02:941,42,0	1/1:0,12:12:15.02:348,15,0	1/1:7,0:6:13.58:147,14,0	0/1:22,0:21:41.14:41,0,359	0/0:21,0:20:30.08:0,30,836	0/1:33,0:26:99:179,0,529	0/1:19,0:17:18:264,0,18	1/1:4,25:28:77.10:1825,77,0	1/1:21,0:18:27.08:849,27,0	0/1:10,0:7:29.31:262,0,29
chr10	57242370	.	TTCCTTCCCTTCTTCTTC	T	5950.77	PASS	AB=0.963;AC=27;AF=0.519;AN=52;BaseQRankSum=7.035;DP=549;FS=0.449;HRun=0;HaplotypeScore=195.7544;InbreedingCoeff=0.1073;MQ=43.15;MQ0=49;MQRankSum=-3.505;QD=16.04;ReadPosRankSum=3.603;VQSLOD=3.4420;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:25:36.97:0,37,978	1/1:4,0:3:2.92:17,3,0	./.	./.	0/0:19,0:15:31.46:0,31,518	0/1:29,0:28:99:281,0,177	0/1:14,0:12:9.21:344,0,9	0/0:29,0:28:64.52:0,65,1004	1/1:16,0:16:18.06:435,18,0	0/1:17,0:14:86.85:324,0,87	0/0:13,0:13:3.22:0,3,80	0/1:14,0:11:17.88:109,0,18	0/0:37,0:35:63.69:0,64,1554	0/0:20,0:20:38.50:0,39,857	1/1:33,0:31:27.09:621,27,0	0/1:24,0:22:16.90:185,0,17	0/1:19,0:17:15.09:356,0,15	0/1:22,0:21:59.32:69,0,59	1/1:14,0:14:41.25:545,41,0	1/1:12,0:12:12.04:160,12,0	0/1:8,0:7:39.60:40,0,83	0/1:7,16:22:60.74:61,0,182	0/0:20,0:19:27.04:0,27,402	0/1:33,0:25:99:408,0,215	1/1:20,0:18:21.02:530,21,0	1/1:31,0:30:22.77:946,23,0	1/1:22,0:19:18.92:408,19,0	0/1:16,0:13:30.76:112,0,31
chr10	57242371	.	TC	T	636.53	PASS	AB=0.981;AC=12;AF=0.231;AN=52;BaseQRankSum=6.430;DP=543;FS=1.273;HRun=2;HaplotypeScore=110.2066;InbreedingCoeff=0.2358;MQ=43.01;MQ0=49;MQRankSum=2.812;QD=4.22;ReadPosRankSum=3.312;VQSLOD=0.7796;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:25:53.81:0,54,710	0/0:4,0:3:3.01:0,3,35	./.	./.	0/0:20,0:16:22.74:0,23,348	0/0:29,0:28:22.32:0,22,262	0/0:14,0:12:24.94:0,25,219	0/0:26,0:25:65.20:0,65,889	1/1:13,3:16:10.79:86,11,0	0/1:17,0:14:83.98:100,0,84	0/1:13,0:13:7.39:7,0,35	0/0:14,0:11:5.80:0,6,31	0/0:37,0:35:60.01:0,60,934	0/0:19,0:19:36.05:0,36,523	0/0:32,0:30:20.87:0,21,99	0/0:23,0:21:8.29:0,8,47	0/0:19,0:17:28.55:0,29,189	0/0:21,0:20:9.02:0,9,109	0/1:14,0:14:90.68:91,0,121	1/1:12,0:12:3.35:64,3,0	0/1:7,1:7:8.07:8,0,65	0/0:23,0:22:14.84:0,15,192	0/0:19,0:18:27.01:0,27,374	0/0:32,0:24:39.41:0,39,334	0/0:20,0:18:16.08:0,16,74	0/1:31,0:30:77.91:291,0,78	1/1:20,2:20:4.39:128,4,0	0/1:18,0:15:2.31:2,0,223
chr10	57242374	.	TTCCCTTCTTCTTC	T	4363.15	PASS	AB=0.924;AC=29;AF=0.558;AN=52;BaseQRankSum=7.981;DP=540;FS=5.014;HRun=0;HaplotypeScore=170.9587;InbreedingCoeff=0.3242;MQ=43.04;MQ0=49;MQRankSum=-3.664;QD=12.19;ReadPosRankSum=4.392;VQSLOD=3.3033;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:26:30.53:0,31,769	0/0:4,0:3:2.68:0,3,11	./.	./.	0/0:20,0:16:5.85:0,6,427	0/1:7,22:28:69.55:243,0,70	1/1:14,0:13:14.22:331,14,0	0/0:26,0:26:70.28:0,70,756	1/1:4,0:16:17.99:304,18,0	0/1:17,0:14:67.77:191,0,68	0/0:13,0:13:8.46:0,8,88	1/1:3,0:10:6.02:118,6,0	0/0:39,0:37:69.68:0,70,1325	0/0:18,0:18:35.92:0,36,612	1/1:11,0:30:26.85:374,27,0	1/1:3,19:20:5.91:126,6,0	1/1:17,0:15:18.76:401,19,0	1/1:4,0:20:0.55:74,1,0	1/1:14,0:14:41.17:380,41,0	1/1:12,0:12:11.89:84,12,0	0/1:8,0:7:23.55:24,0,67	0/1:23,0:22:60.92:61,0,81	0/0:11,9:19:23.68:0,24,171	0/1:30,0:22:42.29:379,0,42	1/1:6,13:18:15.02:348,15,0	0/1:32,0:31:25.30:541,0,25	1/1:6,0:18:21.01:266,21,0	0/1:16,0:15:19:118,0,19
chr10	57242375	.	TC	T	1436.48	PASS	AB=0.972;AC=33;AF=0.635;AN=52;BaseQRankSum=10.172;DP=537;FS=11.797;HRun=3;HaplotypeScore=105.3884;InbreedingCoeff=0.5164;MQ=42.87;MQ0=49;MQRankSum=-2.404;QD=3.91;ReadPosRankSum=2.089;VQSLOD=-0.5013;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:25:11.69:0,12,494	0/0:3,0:2:2.98:0,3,22	./.	./.	0/0:19,1:16:18.55:0,19,237	0/1:28,1:28:13.80:14,0,43	1/1:12,1:13:17.13:95,17,0	0/0:29,0:28:69.42:0,69,861	1/1:12,0:16:15.42:61,15,0	0/1:17,0:14:16.68:40,0,17	1/1:13,0:13:5.19:21,5,0	1/1:13,0:10:5.54:28,6,0	0/0:40,0:38:57.66:0,58,782	0/0:18,0:18:27.23:0,27,378	1/1:25,2:30:22.02:115,22,0	1/1:21,0:20:4.41:13,4,0	1/1:9,4:15:27.89:195,28,0	0/1:20,0:19:9.45:9,0,14	1/1:14,0:14:22.37:132,22,0	1/1:12,0:12:5.63:20,6,0	1/1:3,4:7:11.08:66,11,0	0/1:22,1:22:2.51:3,0,58	0/0:20,0:19:23.12:0,23,127	0/1:26,2:20:27.98:158,0,28	1/1:17,1:17:13.22:67,13,0	1/1:27,5:31:53.39:299,53,0	1/1:19,0:19:18.17:79,18,0	1/1:9,9:15:38.44:209,38,0
chr10	57242376	.	C	CT	545.81	PASS	AB=0.972;AC=14;AF=0.269;AN=52;BaseQRankSum=7.826;DP=538;FS=0.000;HRun=2;HaplotypeScore=108.1475;InbreedingCoeff=0.1245;MQ=42.85;MQ0=49;MQRankSum=1.204;QD=2.54;ReadPosRankSum=5.288;VQSLOD=-0.3988;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:25:51.46:0,51,644	0/0:3,0:2:2.99:0,3,24	./.	./.	0/0:20,0:16:26.34:0,26,304	0/0:29,0:28:20.26:0,20,226	0/1:14,1:13:7.82:8,0,134	0/0:30,0:29:73.29:0,73,937	0/1:16,0:16:3.53:63,0,4	0/1:17,0:14:37.10:37,0,96	0/0:13,0:13:4.82:0,5,33	0/0:13,0:10:5.42:0,5,23	0/0:39,1:38:21.67:0,22,815	0/0:18,0:18:36.02:0,36,471	0/1:30,2:30:24.49:120,0,24	1/1:22,0:20:4.56:31,5,0	0/1:17,0:15:39.82:42,0,40	0/0:20,0:19:5.99:0,6,49	0/1:14,0:14:75.98:76,0,96	1/1:12,0:12:6.87:32,7,0	0/0:8,0:7:6.98:0,7,42	0/0:23,0:22:15.04:0,15,192	0/0:19,0:19:24.08:0,24,333	0/0:28,0:20:25.27:0,25,219	0/1:15,2:16:13.96:42,0,14	0/1:32,0:31:62.80:165,0,63	1/1:21,0:18:8.15:83,8,0	0/0:18,0:15:21.96:0,22,269
chr10	57242377	.	CCTT	C	1371.24	PASS	AB=0.915;AC=39;AF=0.886;AN=44;BaseQRankSum=-0.134;DP=537;FS=0.000;HRun=0;HaplotypeScore=117.1484;InbreedingCoeff=0.0494;MQ=42.80;MQ0=49;MQRankSum=-0.829;QD=3.07;ReadPosRankSum=1.658;VQSLOD=2.2239;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:24,7:25:9.03:112,9,0	./.	./.	./.	1/1:16,4:16:6.02:76,6,0	1/1:29,0:27:5.91:38,6,0	0/1:14,0:12:2.80:11,0,3	./.	1/1:16,0:16:5.95:42,6,0	0/0:17,0:14:6.02:0,6,71	1/1:13,0:13:6.02:76,6,0	1/1:13,0:10:5.94:41,6,0	0/1:25,13:36:32.11:32,0,38	1/1:18,0:18:5.98:65,6,0	1/1:32,0:30:8.91:60,9,0	1/1:23,0:21:2.88:15,3,0	1/1:17,0:16:2.74:12,3,0	1/1:20,0:19:2.98:21,3,0	1/1:14,0:14:4.78:25,5,0	./.	1/1:8,0:7:8.99:109,9,0	1/1:23,0:22:2.97:20,3,0	./.	1/1:28,0:20:6.23:33,6,0	1/1:17,0:16:8.83:55,9,0	0/1:32,0:31:14.20:169,0,14	1/1:21,0:18:8.79:54,9,0	1/1:18,0:15:33.10:413,33,0
chr10	57242379	.	TTC	T	407.82	PASS	AB=0.990;AC=14;AF=0.269;AN=52;BaseQRankSum=3.258;DP=540;FS=9.876;HRun=0;HaplotypeScore=114.6764;InbreedingCoeff=0.2485;MQ=42.71;MQ0=50;MQRankSum=-2.246;QD=2.14;ReadPosRankSum=-2.680;VQSLOD=0.4362;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:24:34.97:0,35,421	0/0:3,0:2:3.01:0,3,36	./.	./.	0/0:19,0:15:20.46:0,20,231	0/0:29,0:27:2.28:0,2,43	0/0:15,0:12:24.56:0,25,134	0/0:30,0:28:63.49:0,63,788	0/1:16,0:16:7.13:7,0,20	0/0:20,0:16:29.54:0,30,267	1/1:13,0:13:5.91:38,6,0	1/1:13,0:10:5.19:20,5,0	0/0:37,0:35:56.39:0,56,707	0/0:16,0:16:7.92:0,8,276	0/1:32,0:30:14.48:14,0,29	0/0:23,0:21:2.33:0,2,11	0/0:18,0:16:12.29:0,12,98	0/1:20,0:19:0.03:0,0,13	0/0:14,0:14:25.36:0,25,130	0/0:12,0:12:11.35:0,11,57	1/1:7,2:8:1.80:130,2,0	0/0:23,0:22:9.81:0,10,53	0/0:21,0:19:22.14:0,22,102	0/0:30,0:21:18.67:0,19,154	0/1:16,0:16:5.24:5,0,9	0/1:31,2:32:92.49:92,0,186	0/1:21,0:18:4.29:4,0,36	1/1:18,0:15:1.46:231,1,0
chr10	57242381	.	C	CCT	526.84	PASS	AB=0.931;AC=10;AF=0.192;AN=52;BaseQRankSum=0.820;DP=541;FS=15.561;HRun=0;HaplotypeScore=115.2361;InbreedingCoeff=-0.1057;MQ=42.48;MQ0=51;MQRankSum=-0.375;QD=2.76;ReadPosRankSum=-5.270;VQSLOD=-0.7051;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:22:38.56:0,39,553	0/0:3,0:2:3.01:0,3,41	./.	./.	0/0:19,0:15:9.50:0,10,245	0/0:27,0:26:7.53:0,8,104	0/0:16,0:14:7.14:0,7,232	0/0:28,0:26:66.79:0,67,955	0/0:16,0:16:16.66:0,17,177	0/0:21,0:16:10.04:0,10,378	1/1:14,0:14:5.96:55,6,0	0/0:13,0:10:1.44:0,1,13	0/0:37,0:35:48.25:0,48,910	0/0:17,0:17:33.04:0,33,472	0/1:29,0:29:20.92:21,0,221	0/1:23,0:21:12.70:13,0,27	0/0:16,0:16:1.54:0,2,348	0/0:20,0:19:1.20:0,1,15	0/1:14,0:14:14.69:15,0,241	0/0:12,0:12:11.97:0,12,125	0/1:7,2:8:22.11:142,0,22	0/0:22,0:22:8.61:0,9,164	0/0:20,0:18:21.03:0,21,269	0/1:31,0:22:3.37:3,0,412	0/1:15,0:16:27.23:27,0,117	0/1:30,2:32:99:144,0,568	0/0:21,0:18:20.81:0,21,263	0/1:11,9:16:62.16:239,0,62
chr10	57250099	.	C	CT	1090.33	PASS	AB=0.906;AC=15;AF=0.268;AN=56;BaseQRankSum=8.150;DP=551;FS=19.528;HRun=10;HaplotypeScore=91.8984;InbreedingCoeff=-0.2574;MQ=48.69;MQ0=39;MQRankSum=0.369;QD=3.41;ReadPosRankSum=2.649;VQSLOD=-0.0116;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:30:55.68:0,56,436	0/0:12,0:9:17.55:0,18,117	0/1:22,0:5:5.60:6,0,53	0/0:31,0:14:12.97:0,13,131	0/0:17,0:17:25.88:0,26,264	0/1:32,7:38:99:156,0,156	0/1:6,0:5:4.89:32,0,5	0/0:26,0:18:45.77:0,46,371	0/0:7,0:7:9.72:0,10,50	0/0:28,0:25:15.06:0,15,272	0/1:14,2:16:27.59:48,0,28	0/1:8,0:8:30.96:64,0,31	0/0:10,0:10:15.96:0,16,112	0/0:6,0:6:8.97:0,9,74	0/0:12,0:12:15.11:0,15,77	0/1:15,1:15:3.70:103,0,4	0/1:41,8:48:82.06:283,0,82	0/1:27,0:26:56.47:176,0,56	0/1:36,3:19:79.94:80,0,157	0/1:17,4:13:4.01:30,0,4	0/1:7,4:9:13.61:53,0,14	0/1:11,0:9:10.78:11,0,50	0/1:11,0:9:28.84:29,0,29	0/0:6,0:6:2.99:0,3,24	0/1:10,4:13:22.86:86,0,23	0/0:26,0:24:49.65:0,50,314	0/1:19,4:19:87.26:88,0,87	0/0:17,0:17:39.55:0,40,217
chr10	57250108	.	T	TC	1287.35	PASS	AB=0.782;AC=11;AF=0.196;AN=56;BaseQRankSum=7.157;DP=472;FS=19.394;HRun=0;HaplotypeScore=89.1806;InbreedingCoeff=-0.1860;MQ=52.41;MQ0=19;MQRankSum=1.072;QD=7.27;ReadPosRankSum=4.276;VQSLOD=1.5241;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:42.05:0,42,692	0/0:11,0:8:16.14:0,16,147	0/0:28,0:7:13.72:0,14,170	0/0:33,0:15:38.02:0,38,343	0/0:16,0:16:38.35:0,38,464	0/1:27,8:35:99:116,0,132	0/1:3,2:4:2.24:73,0,2	0/0:27,0:19:48.90:0,49,622	0/0:6,0:6:12:0,12,123	0/0:22,0:19:50.77:0,51,584	0/1:12,0:11:4.38:4,0,77	0/1:2,5:7:55.54:143,0,56	0/0:8,0:8:20.02:0,20,201	0/0:6,0:6:12:0,12,142	0/0:10,0:10:16.24:0,16,162	0/1:6,8:12:19.64:213,0,20	0/1:26,18:45:61.41:382,0,61	0/1:9,12:21:44.39:388,0,44	0/0:26,0:19:0.46:0,0,378	0/0:15,0:7:10.71:0,11,115	0/1:7,0:7:0.42:0,0,54	0/1:5,2:6:29.29:29,0,64	0/1:5,2:6:64.09:65,0,64	0/0:6,0:6:3.01:0,3,41	0/1:12,0:11:9.51:10,0,136	0/0:20,0:18:49.26:0,49,458	0/0:18,0:15:5.89:0,6,289	0/0:15,0:14:42.12:0,42,491
chr10	57250110	.	C	CT	4527.43	PASS	AB=0.788;AC=40;AF=0.741;AN=54;BaseQRankSum=5.038;DP=473;FS=28.267;HRun=10;HaplotypeScore=80.9411;InbreedingCoeff=0.7311;MQ=52.29;MQ0=21;MQRankSum=-0.496;QD=13.76;ReadPosRankSum=4.112;VQSLOD=3.0639;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:27:9.68:0,10,295	0/1:6,0:8:25.58:26,0,42	0/0:29,0:7:17.81:0,18,150	0/0:33,0:15:9.87:0,10,229	0/0:16,0:16:29.99:0,30,268	1/1:19,5:34:61.34:418,61,0	1/1:4,0:4:8.81:58,9,0	0/0:27,0:19:36.17:0,36,190	1/1:1,5:6:9.03:103,9,0	1/1:10,9:17:12.22:342,12,0	1/1:4,7:10:14.87:149,15,0	1/1:7,0:7:11.92:93,12,0	0/1:7,0:8:4.20:4,0,48	0/0:6,0:6:6:0,6,55	1/1:3,6:10:17.10:158,17,0	1/1:17,0:14:18.36:132,18,0	1/1:36,5:47:78.64:587,79,0	1/1:15,0:21:52.80:349,53,0	1/1:20,7:21:22.32:322,22,0	1/1:6,7:6:18.05:204,18,0	1/1:4,2:6:11.98:114,12,0	1/1:5,0:6:5.84:39,6,0	1/1:4,1:6:14.81:119,15,0	./.	1/1:6,4:10:23.80:215,24,0	1/1:5,11:18:38.34:327,38,0	1/1:6,11:15:36.54:393,37,0	1/1:3,12:14:33.09:376,33,0
chr10	57250330	.	CTT	C	1931.25	PASS	AB=0.752;AC=33;AF=0.589;AN=56;BaseQRankSum=2.086;DP=728;FS=3.352;HRun=15;HaplotypeScore=84.5890;InbreedingCoeff=-0.1434;MQ=44.67;MQ0=28;MQRankSum=-0.176;QD=2.92;ReadPosRankSum=9.117;VQSLOD=-0.6814;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:53,11:58:55.51:56,0,591	1/1:3,5:8:5.87:53,6,0	0/0:11,0:6:5.04:0,5,46	0/0:14,0:8:5.96:0,6,53	0/0:17,0:13:24.38:0,24,241	0/1:20,7:28:42.59:48,0,43	0/1:11,5:17:61.24:82,0,61	0/1:12,0:5:13.97:14,0,73	1/1:3,8:8:5.97:53,6,0	0/1:22,3:21:67.30:67,0,104	0/1:17,7:24:32.06:153,0,32	0/1:7,2:12:0.24:0,0,0	0/0:22,3:18:14.97:0,15,154	0/1:12,9:19:14.50:21,0,15	1/1:8,7:14:5.90:53,6,0	1/1:11,5:28:15.98:70,16,0	1/1:25,8:49:44.52:233,45,0	1/1:17,8:25:5.01:145,5,0	1/1:21,9:25:22.78:170,23,0	0/1:22,11:35:99:184,0,118	0/1:20,4:33:53.87:113,0,54	1/1:16,1:14:2.43:11,2,0	0/1:7,2:18:24.47:72,0,24	1/1:15,7:28:31.72:221,32,0	0/1:9,5:15:10.65:88,0,11	0/1:22,10:25:93.70:94,0,99	0/1:18,4:27:54.28:92,0,54	0/1:12,0:10:5.72:6,0,129
chr10	57250806	.	C	CAAAA	10398.35	PASS	AB=0.714;AC=42;AF=0.750;AN=56;BaseQRankSum=-4.721;DP=607;FS=6.944;HRun=11;HaplotypeScore=73.0674;InbreedingCoeff=0.4992;MQ=45.96;MQ0=61;MQRankSum=-2.426;QD=20.67;ReadPosRankSum=4.634;VQSLOD=2.5289;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:25,7:30:99:388,0,304	0/1:5,3:5:2.92:62,0,3	0/0:15,0:6:11.49:0,11,109	0/0:16,0:12:20.53:0,21,240	0/0:13,0:8:21.07:0,21,281	1/1:15,16:23:42.14:904,42,0	1/1:5,9:15:33.02:581,33,0	0/0:10,0:20:5.52:0,6,37	1/1:5,0:6:9.03:112,9,0	1/1:15,4:16:39.09:602,39,0	1/1:4,8:12:23.99:361,24,0	1/1:6,3:4:9.03:176,9,0	0/0:28,0:24:0.24:0,0,490	0/1:14,6:19:99:312,0,214	1/1:5,6:17:33.02:549,33,0	1/1:4,8:10:21.07:485,21,0	1/1:15,31:45:81.19:1758,81,0	1/1:10,10:18:29.82:552,30,0	1/1:10,5:14:10.94:400,11,0	0/1:15,10:20:19.02:331,0,19	1/1:7,4:14:27.09:490,27,0	1/1:3,3:7:8.94:123,9,0	1/1:5,5:10:9.03:176,9,0	1/1:8,14:27:48.08:960,48,0	1/1:13,1:10:12.04:149,12,0	1/1:17,2:15:36.02:452,36,0	1/1:16,3:18:23.83:361,24,0	1/1:2,0:4:9.03:112,9,0
chr10	57253582	.	A	ATG	6823.06	PASS	AB=0.556;AC=20;AF=0.357;AN=56;BaseQRankSum=-13.590;DP=572;FS=5.661;HRun=0;HaplotypeScore=70.2561;InbreedingCoeff=0.7904;MQ=59.31;MQ0=11;MQRankSum=1.035;QD=28.91;ReadPosRankSum=1.165;VQSLOD=5.7830;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:69.13:0,69,820	0/0:2,0:2:2.97:0,3,20	0/0:22,0:13:24.03:0,24,266	0/0:24,0:17:29.96:0,30,330	0/0:28,0:28:72.23:0,72,885	0/0:15,0:15:39.09:0,39,454	0/0:16,0:16:26.33:0,26,389	0/0:35,0:35:63.18:0,63,748	1/1:1,18:18:36.12:587,36,0	0/1:6,15:20:7.40:658,0,7	1/1:0,13:14:30.10:488,30,0	0/0:18,0:18:29.14:0,29,467	0/0:15,0:17:44.78:0,45,483	0/0:10,0:10:30.09:0,30,369	1/1:2,19:21:14.29:746,14,0	0/0:19,1:21:5.09:0,5,555	0/0:31,0:32:66.59:0,67,843	0/0:28,0:28:65.56:0,66,771	1/1:4,19:20:24.12:668,24,0	1/1:5,16:19:5.25:598,5,0	1/1:2,16:15:21.07:342,21,0	0/0:13,0:12:33.08:0,33,381	0/0:15,0:15:42.12:0,42,504	0/0:10,0:10:23.94:0,24,274	1/1:3,10:12:21.54:344,22,0	1/1:10,25:32:38.32:1088,38,0	0/1:4,32:34:35.61:1001,0,36	1/1:2,12:15:21.65:303,22,0
chr10	57253896	.	GA	G	5235.16	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=8.490;DP=560;FS=2.105;HRun=4;HaplotypeScore=60.0774;InbreedingCoeff=0.9567;MQ=85.57;MQ0=0;MQRankSum=0.690;QD=31.16;ReadPosRankSum=2.562;VQSLOD=5.4554;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,156,2127	0/0:1,0:1:3.01:0,3,42	0/0:21,0:21:54.18:0,54,738	0/0:27,1:25:48.22:0,48,657	0/0:14,0:14:42.14:0,42,588	1/1:0,19:19:39.07:452,39,0	1/1:0,20:20:60.18:717,60,0	0/0:25,0:25:69.19:0,69,915	0/0:22,0:22:63.21:0,63,881	0/0:14,0:14:33.11:0,33,449	0/0:11,0:11:30.10:0,30,417	1/1:0,16:16:48.15:575,48,0	0/0:24,0:24:66.16:0,66,884	0/0:19,0:19:48.16:0,48,660	0/0:25,0:25:72.20:0,72,985	1/1:1,17:18:33.10:396,33,0	1/1:1,28:29:81.25:971,81,0	1/1:0,19:19:48.15:576,48,0	0/0:18,0:18:48.16:0,48,669	0/0:14,1:15:6.08:0,6,469	0/0:41,0:41:99:0,123,1693	1/1:0,11:11:30.09:360,30,0	1/1:0,9:9:27.08:324,27,0	1/1:1,26:27:72.22:864,72,0	0/0:13,0:13:36.10:0,36,482	0/0:21,0:21:57.17:0,57,780	0/0:16,0:16:48.08:0,48,629	0/0:11,0:11:33.11:0,33,462
chr10	57254089	.	TAATA	T	313.41	PASS	AB=0.833;AC=12;AF=0.375;AN=32;BaseQRankSum=0.603;DP=194;FS=0.000;HRun=0;HaplotypeScore=28.3498;InbreedingCoeff=0.3486;MQ=26.77;MQ0=66;MQRankSum=-2.692;QD=6.53;ReadPosRankSum=-1.339;VQSLOD=1.0640;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:5:9.49:0,9,117	0/0:4,0:4:9.03:0,9,210	./.	./.	0/0:7,0:7:6.02:0,6,81	0/0:9,0:7:18.06:0,18,293	./.	./.	1/1:6,2:7:6.02:92,6,0	1/1:7,1:6:3.01:46,3,0	./.	./.	0/0:7,0:4:3.01:0,3,64	./.	1/1:4,1:5:3:25,3,0	0/0:3,0:2:3.01:0,3,70	0/0:25,0:10:18.53:0,19,349	0/0:22,0:10:12.04:0,12,217	./.	./.	./.	./.	0/0:6,0:5:3.01:0,3,48	./.	1/1:4,2:6:3:26,3,0	0/1:4,1:3:40.10:40,0,63	1/1:5,1:6:6.02:91,6,0	0/1:8,2:8:99:113,0,125
chr10	57254128	.	T	TA	1241.64	PASS	AB=0.644;AC=9;AF=0.188;AN=48;BaseQRankSum=-1.322;DP=191;FS=4.502;HRun=3;HaplotypeScore=36.5089;InbreedingCoeff=0.4138;MQ=41.07;MQ0=28;MQRankSum=-4.288;QD=20.69;ReadPosRankSum=1.829;VQSLOD=3.0848;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:5:9.78:0,10,109	0/0:4,0:4:12.04:0,12,144	0/0:2,0:1:1.25:0,1,3	./.	0/0:6,0:6:8.87:0,9,101	1/1:3,9:11:27.09:374,27,0	./.	0/0:31,0:19:51.16:0,51,609	0/0:7,0:7:17.65:0,18,169	0/0:4,0:4:8.89:0,9,87	0/0:2,0:2:3.01:0,3,36	1/1:2,4:5:12.04:163,12,0	0/0:3,0:2:6.02:0,6,72	0/0:4,0:3:9.01:0,9,94	0/0:4,0:4:9.03:0,9,105	0/1:1,2:3:26.92:66,0,27	0/1:9,9:15:71.73:328,0,72	0/1:8,8:12:11.90:265,0,12	0/0:6,0:3:6.02:0,6,70	0/0:5,0:5:15.04:0,15,177	0/0:2,0:2:3.48:0,3,37	./.	1/1:0,5:5:15.05:190,15,0	./.	0/0:6,0:6:14.26:0,14,146	0/0:8,0:6:17.92:0,18,194	0/0:10,0:10:26.75:0,27,266	0/0:13,0:11:25.74:0,26,260
chr10	57254144	.	TAA	T	1883.54	PASS	AB=0.944;AC=24;AF=0.429;AN=56;BaseQRankSum=-1.787;DP=257;FS=8.176;HRun=11;HaplotypeScore=47.0437;InbreedingCoeff=0.7657;MQ=64.17;MQ0=14;MQRankSum=-2.476;QD=14.27;ReadPosRankSum=1.307;VQSLOD=0.9881;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:8:24.08:0,24,345	1/1:1,4:5:12.02:127,12,0	0/1:14,1:9:13.55:14,0,129	0/1:14,0:5:3.07:3,0,7	0/0:10,0:9:27.09:0,27,413	1/1:3,8:11:24.05:255,24,0	1/1:0,3:2:6.02:64,6,0	1/1:9,18:21:51.10:543,51,0	0/0:3,0:8:21.88:0,22,194	0/0:2,0:9:23.97:0,24,222	0/0:0,0:2:6.01:0,6,68	1/1:0,10:10:27.07:287,27,0	0/0:3,0:3:8.52:0,9,101	0/0:7,0:7:18.06:0,18,275	0/0:0,0:7:18.03:0,18,172	1/1:1,5:6:11.99:128,12,0	1/1:7,7:14:21.03:222,21,0	1/1:8,2:9:5.96:64,6,0	0/0:4,0:8:17.98:0,18,162	0/0:2,0:11:27.05:0,27,276	0/0:2,0:4:3.48:0,3,30	1/1:0,2:2:6.02:64,6,0	1/1:0,9:9:24.06:255,24,0	1/1:2,2:3:6.02:64,6,0	0/0:1,0:10:21.03:0,21,201	0/0:5,0:9:24:0,24,221	0/0:2,0:11:32.93:0,33,318	0/0:5,0:12:24.04:0,24,245
chr10	57254289	.	AGTATGTAT	A	9173.78	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-0.426;DP=521;FS=20.853;HRun=0;HaplotypeScore=149.3610;InbreedingCoeff=0.9554;MQ=65.68;MQ0=2;MQRankSum=-7.614;QD=38.71;ReadPosRankSum=-1.542;VQSLOD=3.0945;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:44:90.31:0,90,3269	1/1:1,1:2:3.01:78,3,0	0/0:13,0:10:12.04:0,12,284	0/0:16,0:13:14.80:0,15,391	0/0:13,0:13:33.11:0,33,1167	0/0:10,0:24:42.14:0,42,1372	0/0:15,0:26:30.10:0,30,920	1/1:16,23:39:69.22:1456,69,0	1/1:1,16:17:39.13:1009,39,0	1/1:5,10:15:21.07:457,21,0	1/1:2,6:8:15.01:294,15,0	0/0:5,0:21:48.16:0,48,1507	0/0:15,0:15:42.14:0,42,1476	0/0:17,0:17:48.16:0,48,1879	1/1:2,21:23:45.15:1165,45,0	0/0:4,0:19:42.14:0,42,1433	0/0:7,0:22:36.12:0,36,1150	0/0:4,0:15:36.06:0,36,1028	1/1:8,9:17:27.09:577,27,0	1/1:3,14:17:41.95:730,42,0	1/1:9,16:25:15.05:385,15,0	0/0:1,0:9:27.09:0,27,859	0/0:5,0:11:12.04:0,12,421	0/0:8,0:19:29.99:0,30,846	1/1:4,9:13:15.05:388,15,0	1/1:4,18:22:54.19:1334,54,0	1/1:5,17:22:36.12:913,36,0	1/1:5,12:17:15.05:388,15,0
chr10	57255001	.	GGAGGCA	G	12809.25	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=9.952;DP=586;FS=8.282;HRun=0;HaplotypeScore=132.1936;InbreedingCoeff=0.9651;MQ=54.83;MQ0=1;MQRankSum=-11.927;QD=30.79;ReadPosRankSum=1.082;VQSLOD=3.7574;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:96.25:0,96,2964	0/0:7,0:7:21.07:0,21,671	0/0:17,0:15:33.11:0,33,994	0/0:26,0:24:51.01:0,51,1154	0/0:26,0:26:69.24:0,69,2161	1/1:4,13:17:18.06:393,18,0	1/1:9,14:23:33.07:673,33,0	0/0:25,0:25:54.19:0,54,1701	1/1:5,8:13:24.04:478,24,0	1/1:14,8:21:39.02:648,39,0	1/1:10,9:19:11.83:262,12,0	1/1:4,22:26:45.15:982,45,0	0/0:13,0:13:27.09:0,27,908	0/0:15,0:15:42.14:0,42,1352	1/1:3,18:21:39.09:805,39,0	1/1:3,20:23:53.84:1177,54,0	1/1:6,20:26:45.15:982,45,0	1/1:4,8:12:15.05:327,15,0	1/1:3,20:22:54.07:1007,54,0	1/1:7,19:26:39.95:706,40,0	1/1:4,14:18:8.85:196,9,0	1/1:5,15:20:20.89:457,21,0	1/1:5,16:21:8.99:151,9,0	1/1:7,10:17:15.05:327,15,0	1/1:4,22:26:33.11:720,33,0	1/1:6,17:23:46.96:767,47,0	1/1:8,19:26:66.20:1358,66,0	1/1:2,11:13:18.06:393,18,0
chr10	57255017	.	GCAGGT	G	738.48	PASS	AB=0.979;AC=19;AF=0.339;AN=56;BaseQRankSum=16.922;DP=583;FS=3.098;HRun=0;HaplotypeScore=158.8614;InbreedingCoeff=-0.2175;MQ=52.11;MQ0=1;MQRankSum=-13.902;QD=2.14;ReadPosRankSum=11.902;VQSLOD=0.8238;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,111,2857	0/0:10,0:10:30.10:0,30,790	0/0:18,0:16:36.16:0,36,1194	0/0:20,0:18:42.19:0,42,1397	0/0:33,0:33:78.25:0,78,2071	0/1:16,1:17:42.40:42,0,114	0/1:17,0:17:50.54:51,0,117	0/0:28,0:28:81.28:0,81,2045	0/1:11,1:12:36.87:37,0,141	0/1:14,1:14:26.93:27,0,179	1/1:10,0:10:8.51:27,9,0	0/1:29,1:30:55.23:55,0,430	0/0:12,0:12:36.12:0,36,1057	0/0:17,0:17:51.18:0,51,1487	0/1:24,0:24:31.56:32,0,400	0/1:22,1:23:52.35:52,0,87	0/1:29,0:29:38.05:38,0,441	0/0:12,0:12:4.27:0,4,272	0/1:24,0:22:99:174,0,138	0/1:22,1:23:83.98:84,0,106	0/0:24,0:24:2.91:0,3,302	1/1:15,1:16:14.22:45,14,0	0/0:21,0:21:9.75:0,10,337	0/1:17,0:17:7.27:7,0,324	0/1:25,0:25:36.17:36,0,125	0/1:21,0:21:99:130,0,233	0/1:26,0:25:64.05:64,0,330	0/1:16,0:16:0.93:1,0,256
chr10	57255328	.	C	CTCTA	11370.33	PASS	AB=0.653;AC=35;AF=0.673;AN=52;BaseQRankSum=-8.189;DP=685;FS=8.746;HRun=0;HaplotypeScore=122.7324;InbreedingCoeff=0.7269;MQ=67.93;MQ0=4;MQRankSum=0.615;QD=23.30;ReadPosRankSum=-1.350;VQSLOD=3.8513;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:22,17:38:42.14:980,42,0	1/1:13,0:13:3.01:51,3,0	./.	./.	0/1:16,14:30:3.81:863,0,4	0/0:17,0:17:11.79:0,12,184	0/0:30,0:30:36.08:0,36,506	1/1:45,0:45:28.17:266,28,0	1/1:8,8:18:21.07:490,21,0	1/1:20,12:31:36.12:831,36,0	1/1:8,7:15:18.06:416,18,0	0/0:27,0:28:51.14:0,51,722	0/0:15,0:15:24.08:0,24,362	0/0:30,0:30:41.16:0,41,584	1/1:23,0:28:15.05:260,15,0	0/0:26,0:26:45.14:0,45,664	1/1:6,10:18:27.09:618,27,0	1/1:6,5:12:12.04:280,12,0	1/1:13,5:18:15.03:303,15,0	1/1:17,6:25:24.08:523,24,0	1/1:18,11:30:24.08:560,24,0	0/0:14,0:14:15.04:0,15,209	1/1:5,12:18:26.60:625,27,0	0/1:6,8:14:24.89:399,0,25	0/1:14,17:32:6.83:800,0,7	1/1:18,16:36:48.12:1010,48,0	1/1:16,20:37:51.18:1187,51,0	1/1:15,12:27:39.13:909,39,0
chr10	57255330	.	C	CTATCTATCTATCTATT	1634.67	PASS	AB=1.000;AC=10;AF=0.179;AN=56;BaseQRankSum=-1.992;DP=690;FS=1.899;HRun=0;HaplotypeScore=318.5283;InbreedingCoeff=0.2505;MQ=65.64;MQ0=7;MQRankSum=-4.193;QD=7.67;ReadPosRankSum=-6.219;VQSLOD=0.4068;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:37:79.89:0,80,837	1/1:3,10:13:8.99:480,9,0	0/0:22,0:18:35.85:0,36,325	0/0:13,0:12:24.04:0,24,263	0/1:30,0:30:29.11:29,0,636	0/0:17,0:17:29.64:0,30,686	0/0:28,0:28:69.08:0,69,1635	1/1:49,0:48:84.02:1030,84,0	0/0:18,0:18:39.04:0,39,412	0/0:31,0:30:33.93:0,34,712	0/1:14,0:14:22.20:22,0,228	0/0:30,0:30:65.38:0,65,2149	0/0:15,0:15:42.06:0,42,1085	0/0:29,0:29:69.10:0,69,1869	0/1:28,0:28:99:149,0,247	0/0:27,0:27:66.13:0,66,1947	0/0:19,0:19:42.01:0,42,454	0/0:13,0:13:23.89:0,24,214	0/0:19,0:18:24.52:0,25,262	0/1:25,0:25:26.31:26,0,423	0/0:32,0:32:61.77:0,62,559	0/0:14,0:14:24.04:0,24,653	0/1:18,0:18:15.39:15,0,311	0/0:15,0:15:30.05:0,30,436	0/0:32,0:32:61.34:0,61,756	0/1:36,0:36:35.57:36,0,714	0/0:38,0:37:84.03:0,84,890	0/0:27,0:27:74.95:0,75,739
chr10	57255626	.	C	CT	3718.30	PASS	AB=0.794;AC=45;AF=0.833;AN=54;BaseQRankSum=-1.422;DP=451;FS=4.457;HRun=13;HaplotypeScore=58.1211;InbreedingCoeff=0.3349;MQ=68.22;MQ0=8;MQRankSum=0.109;QD=8.61;ReadPosRankSum=0.903;VQSLOD=2.6537;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:10,20:31:0.96:401,0,1	1/1:1,2:10:7.68:65,8,0	0/1:27,0:10:3.44:3,0,14	0/1:33,0:13:9.64:10,0,20	1/1:5,10:15:19.65:249,20,0	1/1:5,14:20:22.98:291,23,0	0/1:6,3:9:33.41:33,0,35	1/1:17,2:30:23.09:238,23,0	1/1:4,0:10:14.42:80,14,0	1/1:5,4:11:14.83:117,15,0	1/1:5,3:19:32.17:230,32,0	1/1:2,8:10:3:28,3,0	0/0:10,0:13:15.91:0,16,94	0/0:6,0:6:11.89:0,12,82	1/1:2,1:10:25.98:156,26,0	1/1:3,7:11:14.18:161,14,0	1/1:5,25:30:21.95:488,22,0	0/1:7,11:20:47.24:196,0,47	1/1:10,1:18:25.73:143,26,0	1/1:7,0:14:13.32:85,13,0	1/1:4,0:7:2.84:14,3,0	./.	1/1:0,2:4:11.79:88,12,0	1/1:4,10:16:19.94:239,20,0	1/1:4,0:14:8.52:43,9,0	1/1:9,1:19:23.19:148,23,0	1/1:7,0:14:11.36:58,11,0	1/1:10,1:23:16.51:152,17,0
chr10	57255884	.	CA	C	5517.91	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=10.139;DP=506;FS=10.814;HRun=2;HaplotypeScore=54.5753;InbreedingCoeff=0.9698;MQ=71.98;MQ0=0;MQRankSum=-0.716;QD=30.66;ReadPosRankSum=1.844;VQSLOD=3.2785;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:87.23:0,87,1265	0/0:4,0:4:12.04:0,12,180	0/0:19,0:19:53.37:0,53,742	0/0:11,0:10:30.06:0,30,405	0/0:11,0:11:33.11:0,33,495	1/1:0,21:21:48.16:623,48,0	1/1:0,20:20:51.16:657,51,0	0/0:19,0:19:57.19:0,57,851	0/0:22,0:22:54.18:0,54,806	0/0:17,0:17:51.17:0,51,748	0/0:7,0:7:21.07:0,21,315	1/1:1,18:19:39.13:506,39,0	0/0:13,0:13:30.09:0,30,427	0/0:15,0:15:33.07:0,33,466	0/0:23,0:22:57.18:0,57,835	1/1:1,21:22:7.39:579,7,0	1/1:2,34:36:90.29:1168,90,0	1/1:0,22:21:57.19:740,57,0	0/0:13,0:13:39.05:0,39,537	0/0:18,0:18:51.17:0,51,763	0/0:20,0:20:57.18:0,57,829	1/1:0,3:3:9.03:117,9,0	1/1:0,5:5:15.05:195,15,0	1/1:0,32:31:72.23:934,72,0	0/0:12,0:12:36.12:0,36,540	0/0:26,0:25:75.24:0,75,1103	0/0:29,0:29:66.20:0,66,947	0/0:14,0:14:42.14:0,42,629
chr10	57257753	.	G	GA	3726.60	PASS	AB=0.727;AC=41;AF=0.732;AN=56;BaseQRankSum=-3.499;DP=526;FS=0.966;HRun=14;HaplotypeScore=73.1296;InbreedingCoeff=0.3208;MQ=76.40;MQ0=5;MQRankSum=-1.149;QD=8.89;ReadPosRankSum=-0.362;VQSLOD=2.8329;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,2:34:12.30:0,12,309	1/1:4,0:7:8.61:46,9,0	0/0:25,0:18:11.56:0,12,103	0/1:21,0:16:6.84:12,0,7	0/0:27,2:30:40.45:0,40,377	0/1:9,12:21:28.12:131,0,28	1/1:5,11:17:26.21:206,26,0	1/1:18,1:30:42.56:234,43,0	1/1:5,6:12:17.92:149,18,0	1/1:3,14:19:29.06:277,29,0	1/1:4,9:14:26.71:203,27,0	0/1:8,8:16:11.98:23,0,12	0/1:13,2:15:2.77:3,0,109	0/0:14,0:16:25.49:0,25,157	1/1:3,20:23:35.95:309,36,0	1/1:4,11:19:19.19:251,19,0	0/1:10,14:26:42.11:178,0,42	1/1:8,19:31:26.83:440,27,0	1/1:9,1:10:5.99:50,6,0	1/1:8,11:21:14.81:128,15,0	0/1:9,6:17:41.84:59,0,42	1/1:7,9:17:13.35:211,13,0	1/1:6,9:16:4.35:183,4,0	0/1:3,6:9:7.27:67,0,7	1/1:3,10:14:14.84:119,15,0	1/1:10,14:26:22.34:287,22,0	1/1:3,8:14:0.58:135,1,0	1/1:1,2:3:3:26,3,0
chr10	57257930	.	AACCCAGGGCC	A	10792.54	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=14.231;DP=537;FS=13.041;HRun=0;HaplotypeScore=155.7697;InbreedingCoeff=0.9877;MQ=52.87;MQ0=10;MQRankSum=-13.806;QD=72.43;ReadPosRankSum=3.326;VQSLOD=4.1218;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:31:87.28:0,87,4345	0/0:10,0:10:27.09:0,27,1336	0/0:30,0:12:36.12:0,36,1477	0/0:51,0:29:80.72:0,81,3231	0/0:18,0:18:51.18:0,51,2604	0/0:18,0:18:51.16:0,51,2377	0/0:30,0:30:87.30:0,87,4352	0/0:33,0:33:96.32:0,96,4314	1/1:2,15:17:39.61:1261,40,0	1/1:1,10:9:27.09:882,27,0	1/1:1,5:5:15.05:494,15,0	0/0:13,0:13:36.12:0,36,1858	0/0:18,0:18:48.15:0,48,2313	0/0:21,0:21:63.22:0,63,3280	1/1:3,20:23:51.17:1648,51,0	0/0:24,0:24:72.25:0,72,3717	0/0:22,0:22:63.22:0,63,3188	0/0:19,0:18:54.19:0,54,2767	1/1:2,12:13:36.08:1035,36,0	1/1:3,10:12:33.11:1048,33,0	1/1:1,17:18:21.07:604,21,0	0/0:15,0:15:42.14:0,42,2212	0/0:8,0:8:24.08:0,24,1253	0/0:25,0:25:72.25:0,72,3750	1/1:0,9:9:24.08:791,24,0	1/1:1,19:20:57.17:1746,57,0	1/1:4,11:15:30.10:987,30,0	1/1:0,3:3:9.03:297,9,0
chr10	57259453	.	ATT	A	4269.59	PASS	AB=0.692;AC=30;AF=0.536;AN=56;BaseQRankSum=-4.386;DP=562;FS=48.232;HRun=14;HaplotypeScore=79.2077;InbreedingCoeff=0.6493;MQ=68.20;MQ0=1;MQRankSum=1.313;QD=12.86;ReadPosRankSum=3.814;VQSLOD=0.0896;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:57.99:0,58,737	1/1:1,10:11:26.83:249,27,0	0/0:16,0:13:6.34:0,6,156	0/1:8,0:5:18.35:18,0,25	0/0:23,0:26:68.70:0,69,891	0/0:8,0:21:34.44:0,34,177	0/1:5,2:22:24.05:24,0,88	1/1:13,17:30:47.77:442,48,0	1/1:1,20:22:41.75:373,42,0	1/1:7,9:18:9.38:247,9,0	1/1:5,15:20:3.35:347,3,0	0/0:1,0:15:25.33:0,25,102	0/0:18,0:21:59.15:0,59,747	0/0:15,0:15:11.32:0,11,430	1/1:2,15:17:36.01:333,36,0	0/1:8,2:23:18.08:18,0,114	0/0:7,0:24:30.13:0,30,168	0/0:8,1:20:9.70:0,10,197	1/1:8,7:16:17.48:197,17,0	1/1:6,16:23:53.58:474,54,0	1/1:11,14:28:23.39:314,23,0	0/0:8,0:17:12.68:0,13,190	0/0:16,0:27:64.58:0,65,410	0/1:6,3:18:21.93:62,0,22	1/1:8,9:17:13.45:160,13,0	1/1:8,11:20:26.64:343,27,0	1/1:6,17:24:41.79:435,42,0	1/1:3,10:15:14.70:233,15,0
chr10	57259831	.	GAGATAGAT	G	2520.08	PASS	AB=0.909;AC=19;AF=0.380;AN=50;BaseQRankSum=-3.961;DP=740;FS=1.353;HRun=0;HaplotypeScore=214.8084;InbreedingCoeff=0.7688;MQ=54.26;MQ0=20;MQRankSum=-0.094;QD=10.37;ReadPosRankSum=-0.062;VQSLOD=2.7789;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:39.09:0,39,1115	0/0:11,0:11:21.04:0,21,583	./.	./.	0/0:14,0:30:14.97:0,15,122	0/0:32,0:30:23.90:0,24,234	0/0:14,0:12:0:0,0,0	./.	1/1:18,7:25:14.65:328,15,0	1/1:20,0:29:6.35:75,6,0	1/1:24,0:24:9.93:107,10,0	0/0:28,0:25:18:0,18,202	0/0:19,0:18:15.05:0,15,418	0/0:23,0:23:36.12:0,36,1175	1/1:23,3:26:17.89:322,18,0	0/0:38,0:35:26.34:0,26,252	0/0:17,0:17:6.02:0,6,87	0/0:19,0:18:13.68:0,14,125	0/1:18,0:18:12.21:155,0,12	1/1:26,4:29:18.04:364,18,0	1/1:17,2:19:3:26,3,0	0/0:38,0:37:15.50:0,15,167	0/0:47,0:44:12.04:0,12,192	0/0:25,0:25:3.01:0,3,48	1/1:14,5:19:15.05:277,15,0	1/1:14,2:16:15.57:372,16,0	1/1:27,7:34:36.09:681,36,0	0/0:10,0:13:21.42:0,21,170
chr10	57259879	.	TA	T	291.99	PASS	AB=0.883;AC=2;AF=0.036;AN=56;BaseQRankSum=0.770;DP=680;FS=3.806;HRun=1;HaplotypeScore=164.0821;InbreedingCoeff=-0.0426;MQ=49.44;MQ0=13;MQRankSum=1.413;QD=6.64;ReadPosRankSum=-2.160;VQSLOD=-0.0192;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:73.04:0,73,1045	0/0:12,0:12:26.96:0,27,425	0/0:10,0:6:18.06:0,18,251	0/0:8,0:3:9.03:0,9,132	0/0:30,0:28:33.17:0,33,375	0/0:32,0:30:69.12:0,69,1001	0/0:13,0:11:11.99:0,12,176	0/0:34,0:31:90.30:0,90,1316	0/0:30,1:31:57.80:0,58,695	0/1:21,0:20:99:151,0,435	0/1:16,7:22:99:230,0,307	0/0:30,0:27:53.77:0,54,749	0/0:13,0:13:39.13:0,39,589	0/0:24,0:24:65.62:0,66,994	0/0:29,0:29:62.84:0,63,847	0/0:46,0:43:71.21:0,71,1001	0/0:11,0:11:19:0,19,253	0/0:23,0:22:55.72:0,56,802	0/0:21,0:16:23.31:0,23,568	0/0:29,0:27:55.92:0,56,758	0/0:23,1:24:45.12:0,45,617	0/0:28,0:27:39.13:0,39,557	0/0:37,0:33:44:0,44,602	0/0:14,0:14:27.09:0,27,377	0/0:23,0:23:47.93:0,48,621	0/0:22,1:23:10.53:0,11,616	0/0:34,0:32:58.20:0,58,745	0/0:23,0:23:41.23:0,41,510
chr10	57259914	.	C	CACAT	10279.67	PASS	AB=0.838;AC=44;AF=0.846;AN=52;BaseQRankSum=-6.146;DP=712;FS=0.681;HRun=0;HaplotypeScore=149.5889;InbreedingCoeff=0.4064;MQ=53.75;MQ0=4;MQRankSum=0.996;QD=16.29;ReadPosRankSum=0.481;VQSLOD=4.2580;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:28:6.04:49,0,6	1/1:6,1:11:1.25:3,1,0	./.	./.	1/1:23,0:24:16.41:159,16,0	1/1:11,10:20:24.08:563,24,0	1/1:7,3:10:3.01:70,3,0	1/1:43,0:41:20.95:232,21,0	1/1:16,17:35:33.11:762,33,0	0/1:27,0:27:21.29:265,0,21	1/1:13,10:23:14.91:351,15,0	1/1:17,10:26:21.07:480,21,0	0/0:18,0:19:45.15:0,45,669	0/0:20,0:22:36.12:0,36,537	0/1:10,24:37:4.17:872,0,4	1/1:21,1:33:17.45:155,17,0	0/1:13,0:17:6.14:105,0,6	1/1:12,14:27:24.55:563,25,0	1/1:17,8:25:27.04:535,27,0	1/1:14,23:36:36.12:844,36,0	1/1:17,8:27:18.06:422,18,0	1/1:10,8:18:8.81:211,9,0	1/1:12,10:20:18.06:422,18,0	1/1:7,8:15:8.86:211,9,0	1/1:10,17:28:33:774,33,0	1/1:10,15:28:45.15:967,45,0	1/1:17,19:37:36.12:844,36,0	1/1:10,14:24:18.06:422,18,0
chr10	57264195	.	T	TA	5283.11	PASS	AB=0.962;AC=24;AF=0.429;AN=56;BaseQRankSum=-10.528;DP=464;FS=3.427;HRun=9;HaplotypeScore=46.0606;InbreedingCoeff=0.7842;MQ=75.98;MQ0=4;MQRankSum=-1.499;QD=21.39;ReadPosRankSum=2.384;VQSLOD=5.5137;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:74.97:0,75,651	0/0:4,0:4:9:0,9,78	0/1:36,0:21:18.21:18,0,103	0/0:14,0:7:0.05:0,0,10	0/0:25,0:25:65.95:0,66,568	0/1:11,1:12:12.19:12,0,135	0/0:6,0:6:14.95:0,15,122	0/0:20,0:20:53.02:0,53,446	1/1:2,10:12:30.08:332,30,0	1/1:4,11:15:36.10:398,36,0	1/1:4,20:24:37.12:635,37,0	0/0:15,0:15:35.97:0,36,310	0/0:15,0:15:32.98:0,33,286	0/0:11,0:11:29.98:0,30,259	1/1:1,11:12:30.08:332,30,0	0/0:14,0:14:32.97:0,33,283	0/0:20,0:20:50.97:0,51,439	0/0:14,0:14:35.97:0,36,306	1/1:4,10:14:4.02:266,4,0	1/1:4,21:25:51.06:539,51,0	1/1:1,4:5:12.03:133,12,0	0/0:5,0:6:11.04:0,11,84	0/0:13,0:13:32.94:0,33,277	0/0:9,0:9:26.98:0,27,232	1/1:1,10:11:27.07:299,27,0	1/1:3,27:30:64.59:896,65,0	1/1:3,33:36:93.25:1027,93,0	1/1:1,14:15:36.10:398,36,0
chr10	57265379	.	CTTCCACATGCAGAATGCTGTCTCCATGGAGA	C	62.32	PASS	AB=1.000;AC=11;AF=0.423;AN=26;BaseQRankSum=5.099;DP=486;FS=26.426;HRun=0;HaplotypeScore=110.2460;InbreedingCoeff=0.6559;MQ=31.00;MQ0=186;MQRankSum=-4.806;QD=0.64;ReadPosRankSum=-1.537;VQSLOD=0.4703;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:62.99:0,63,929	0/0:23,0:5:0:0,0,0	./.	./.	0/0:34,0:30:33.09:0,33,479	./.	0/1:17,0:6:0:0,0,0	0/0:34,0:4:11.05:0,11,101	./.	1/1:9,0:2:5.90:37,6,0	./.	1/1:19,0:8:10.30:54,10,0	0/0:34,0:34:57.19:0,57,997	0/0:37,0:35:39.10:0,39,617	./.	1/1:18,0:5:7.14:40,7,0	./.	1/1:13,0:1:2.98:21,3,0	./.	./.	./.	./.	1/1:5,17:16:2.98:21,3,0	./.	./.	0/0:8,0:2:2.99:0,3,24	./.	./.
chr10	57265925	.	GTCTCCATGGAGATTCCACGTGCAGAATGCCA	G	188.19	PASS	AB=1.000;AC=8;AF=0.286;AN=28;BaseQRankSum=5.317;DP=225;FS=22.783;HRun=0;HaplotypeScore=189.1457;InbreedingCoeff=0.4069;MQ=54.97;MQ0=26;MQRankSum=-4.810;QD=4.18;ReadPosRankSum=-0.823;VQSLOD=1.0438;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,114,3450	./.	0/0:7,0:1:3.01:0,3,84	0/1:10,0:2:11.70:12,0,65	0/0:30,0:30:69.22:0,69,1906	./.	./.	0/0:12,0:4:5.67:0,6,16	0/0:4,0:3:4.07:0,4,12	1/1:8,0:5:9.03:118,9,0	./.	./.	0/0:26,0:26:69.24:0,69,2221	0/0:34,0:34:78.22:0,78,2365	0/1:16,0:13:13.43:24,0,13	./.	./.	./.	0/0:5,0:1:1.55:0,2,4	./.	1/1:6,0:3:3.99:14,4,0	./.	./.	./.	./.	1/1:1,4:5:14.78:132,15,0	0/0:3,0:3:3.78:0,4,11	./.
chr10	57267103	.	TC	T	9936.85	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=20.223;DP=664;FS=9.932;HRun=2;HaplotypeScore=122.2669;InbreedingCoeff=0.9995;MQ=87.23;MQ0=0;MQRankSum=-6.935;QD=34.74;ReadPosRankSum=1.356;VQSLOD=3.4997;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,123,1775	1/1:1,11:12:33.11:426,33,0	0/0:22,0:22:60.18:0,60,846	0/0:30,0:29:84.28:0,84,1238	0/0:17,0:17:51.17:0,51,764	0/0:23,0:23:66.22:0,66,988	0/0:24,0:24:69.23:0,69,1034	1/1:1,27:28:81.25:1037,81,0	1/1:2,25:27:72.23:934,72,0	1/1:3,22:25:63.20:816,63,0	1/1:0,10:10:24.08:312,24,0	0/0:28,0:28:84.27:0,84,1239	0/0:26,0:26:75.25:0,75,1123	0/0:22,0:22:63.21:0,63,942	1/1:3,41:44:99:1480,114,0	0/0:23,0:23:69.22:0,69,1012	0/0:29,0:29:81.25:0,81,1191	0/0:29,0:29:81.27:0,81,1214	1/1:1,13:14:39.13:505,39,0	1/1:1,20:21:57.19:739,57,0	1/1:5,35:40:99:1400,108,0	0/0:18,0:18:54.18:0,54,808	0/0:12,0:12:33.11:0,33,495	0/0:29,0:29:87.29:0,87,1304	1/1:0,9:9:27.09:350,27,0	1/1:1,12:13:39.13:501,39,0	1/1:1,29:30:78.25:1008,78,0	1/1:2,11:13:33.11:428,33,0
chr10	57267364	.	A	AG	5072.15	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-10.770;DP=490;FS=0.788;HRun=6;HaplotypeScore=53.1823;InbreedingCoeff=0.9986;MQ=75.22;MQ0=0;MQRankSum=0.294;QD=30.74;ReadPosRankSum=1.123;VQSLOD=5.3467;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:54.12:0,54,551	0/0:12,0:12:26.87:0,27,275	0/0:12,0:12:30.50:0,30,296	0/0:18,0:18:44.96:0,45,432	0/0:17,0:17:39.09:0,39,398	1/1:0,14:14:33.11:415,33,0	1/1:4,25:29:63.20:792,63,0	0/0:20,0:20:54.03:0,54,516	0/0:20,0:20:54.12:0,54,551	0/0:21,0:21:54.11:0,54,545	0/0:20,0:20:57.13:0,57,581	1/1:3,21:24:60.19:754,60,0	0/0:13,0:13:36.08:0,36,367	0/0:9,0:9:27.06:0,27,275	0/0:20,0:20:51.11:0,51,520	1/1:1,18:19:54.17:679,54,0	1/1:3,18:21:54.17:677,54,0	1/1:2,10:12:30.10:377,30,0	0/0:13,0:13:33.04:0,33,324	0/0:13,0:13:33.07:0,33,337	0/0:27,0:27:69.14:0,69,697	1/1:2,8:10:21.07:264,21,0	1/1:2,11:13:30.04:358,30,0	1/1:1,22:23:60.19:755,60,0	0/0:15,0:15:36.08:0,36,367	0/0:16,0:16:39.08:0,39,398	0/0:24,0:24:54.11:0,54,550	0/0:14,0:14:39.09:0,39,398
chr10	57267395	.	G	GA	341.93	PASS	AB=0.903;AC=7;AF=0.125;AN=56;BaseQRankSum=-2.378;DP=495;FS=5.136;HRun=12;HaplotypeScore=76.0668;InbreedingCoeff=0.4626;MQ=67.84;MQ0=0;MQRankSum=0.596;QD=4.17;ReadPosRankSum=-2.230;VQSLOD=0.9191;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:27:19.56:0,20,289	1/1:1,5:6:12.02:117,12,0	0/0:15,0:15:7.37:0,7,103	0/0:22,0:17:18.57:0,19,117	0/1:13,1:14:5.34:5,0,129	0/0:13,0:13:26.84:0,27,197	0/0:22,0:23:38.71:0,39,284	1/1:9,12:23:19.79:313,20,0	0/0:20,0:23:56.78:0,57,390	0/0:21,0:21:43.74:0,44,312	0/0:16,0:18:30.89:0,31,209	0/0:28,0:28:53.60:0,54,394	0/0:16,0:16:34.80:0,35,245	0/0:10,0:10:14.86:0,15,109	0/0:21,0:21:47.67:0,48,350	0/0:17,0:18:22.80:0,23,159	0/0:19,0:20:43.75:0,44,312	0/0:17,0:19:41.89:0,42,280	0/1:14,2:17:29.51:30,0,130	0/0:12,0:12:19.12:0,19,150	0/0:17,0:18:25.86:0,26,181	0/0:7,0:7:17.89:0,18,131	0/0:8,0:9:11.89:0,12,87	0/0:25,1:26:18.35:0,18,299	0/0:14,0:15:19.84:0,20,135	0/0:15,1:16:3.61:0,4,190	0/1:19,3:22:9.92:10,0,202	0/0:15,0:15:23.73:0,24,175
chr10	57267868	.	CA	C	527.08	PASS	AC=24;AF=0.923;AN=26;BaseQRankSum=1.519;DP=18;FS=12.041;HRun=1;HaplotypeScore=37.2838;InbreedingCoeff=0.0496;MQ=65.60;MQ0=1;MQRankSum=-1.735;QD=35.14;ReadPosRankSum=1.302;VQSLOD=2.0802;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,1:1:3.01:41,3,0	./.	./.	0/0:2,1:2:2.99:0,3,23	./.	./.	1/1:0,1:1:3.01:41,3,0	./.	./.	1/1:0,1:1:3.01:41,3,0	./.	1/1:0,1:1:3.01:41,3,0	./.	./.	1/1:0,1:1:3.01:41,3,0	1/1:0,1:1:3.01:41,3,0	1/1:0,1:1:3.01:35,3,0	./.	1/1:0,1:1:3.01:41,3,0	1/1:0,1:1:3.01:41,3,0	./.	./.	./.	./.	1/1:0,1:1:3.01:41,3,0	1/1:0,4:4:12.04:164,12,0	./.	1/1:0,1:1:3.01:41,3,0
chr10	57267882	.	T	TCACA	1491.97	PASS	AC=26;AF=0.929;AN=28;BaseQRankSum=-1.018;DP=37;FS=10.212;HRun=0;HaplotypeScore=42.6906;InbreedingCoeff=0.0538;MQ=48.99;MQ0=1;MQRankSum=-0.899;QD=62.17;ReadPosRankSum=1.617;VQSLOD=4.8676;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,1:1:3.01:86,3,0	./.	./.	0/0:6,0:3:3.01:0,3,38	./.	./.	1/1:0,1:1:3.01:86,3,0	./.	./.	1/1:0,1:1:3.01:86,3,0	./.	1/1:0,3:3:3.01:86,3,0	./.	./.	1/1:0,2:2:3.01:86,3,0	1/1:0,3:3:2.41:112,2,0	1/1:0,1:1:3.01:86,3,0	./.	1/1:1,0:1:3.01:86,3,0	1/1:0,1:1:3.01:86,3,0	./.	./.	./.	./.	1/1:0,1:1:3.01:86,3,0	1/1:0,4:4:12.04:345,12,0	1/1:0,4:4:9.02:259,9,0	1/1:0,1:1:3.01:86,3,0
chr10	57267920	.	AAAG	A	352.27	PASS	AC=12;AF=1.000;AN=12;DP=28;FS=0.000;HRun=0;HaplotypeScore=74.9289;MQ=20.10;MQ0=8;QD=27.10;VQSLOD=3.4533;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	./.	./.	./.	./.	1/1:0,2:2:6.02:78,6,0	./.	./.	./.	./.	./.	1/1:0,1:1:3.01:40,3,0	1/1:0,3:3:5.55:59,6,0	./.	./.	1/1:0,1:1:3.01:41,3,0	./.	./.	./.	./.	./.	./.	1/1:0,2:2:6.02:82,6,0	1/1:1,3:3:9.03:120,9,0	./.
chr10	57267929	.	G	GAAAT	783.29	PASS	AB=1.000;AC=13;AF=0.813;AN=16;BaseQRankSum=1.470;DP=22;FS=0.000;HRun=0;HaplotypeScore=65.8611;MQ=80.54;MQ0=5;MQRankSum=-1.737;QD=48.96;ReadPosRankSum=1.470;VQSLOD=3.8920;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:6,0:2:2.88:0,3,47	0/1:2,0:1:0:0,0,0	./.	./.	./.	./.	1/1:0,2:2:6.02:157,6,0	./.	./.	./.	./.	./.	1/1:0,1:1:3.01:77,3,0	1/1:0,3:3:9.01:159,9,0	./.	./.	1/1:0,1:1:3.01:79,3,0	./.	./.	./.	./.	./.	./.	1/1:0,2:2:6.02:156,6,0	1/1:1,3:3:9.03:235,9,0	./.
chr10	57267944	.	A	AAG	476.84	PASS	AB=1.000;AC=16;AF=0.727;AN=22;BaseQRankSum=1.826;DP=27;FS=6.990;HRun=0;HaplotypeScore=57.7166;InbreedingCoeff=0.1455;MQ=95.93;MQ0=1;MQRankSum=-2.143;QD=19.87;ReadPosRankSum=1.191;VQSLOD=3.2830;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	./.	1/1:5,0:4:2.49:40,2,0	0/1:3,0:2:16.09:16,0,24	./.	./.	./.	0/0:2,0:2:0.47:0,0,1	1/1:0,2:2:6.02:92,6,0	0/1:3,0:3:0:0,0,0	./.	./.	0/0:1,0:1:0:0,0,0	./.	1/1:0,1:1:3.01:45,3,0	1/1:0,3:3:8.80:85,9,0	./.	./.	1/1:0,1:1:3.01:47,3,0	./.	./.	./.	./.	./.	./.	1/1:0,2:2:6.02:92,6,0	1/1:1,3:4:9.03:138,9,0	./.
chr10	57267945	.	T	TTCC	4611.66	PASS	AB=0.792;AC=42;AF=0.955;AN=44;BaseQRankSum=1.481;DP=100;FS=6.712;HRun=0;HaplotypeScore=119.0945;InbreedingCoeff=-0.1017;MQ=55.62;MQ0=1;MQRankSum=-2.284;QD=46.12;ReadPosRankSum=0.955;VQSLOD=6.9620;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:10,0:10:30.10:540,30,0	1/1:1,0:1:3.01:55,3,0	0/1:4,1:4:6.87:130,0,7	0/1:2,0:2:18.57:41,0,19	./.	1/1:5,0:5:9.03:154,9,0	1/1:4,0:4:12.04:222,12,0	1/1:8,0:7:18.05:320,18,0	1/1:1,2:3:9.03:167,9,0	1/1:4,0:4:6.01:82,6,0	1/1:1,0:1:3.01:55,3,0	1/1:3,0:3:9.03:166,9,0	1/1:1,0:1:3:25,3,0	1/1:5,0:5:15.05:274,15,0	1/1:3,1:4:12.04:220,12,0	1/1:8,3:11:32.60:546,33,0	1/1:4,0:4:12.04:224,12,0	1/1:3,0:3:5.80:114,6,0	1/1:4,1:5:15.05:282,15,0	./.	./.	./.	./.	1/1:3,0:3:6.02:110,6,0	1/1:6,0:6:18.06:322,18,0	1/1:2,2:4:12.04:224,12,0	1/1:4,3:7:18.06:336,18,0	./.
chr10	57268005	.	TTTC	T	140.66	PASS	AB=0.906;AC=8;AF=0.154;AN=52;BaseQRankSum=0.626;DP=297;FS=0.729;HRun=0;HaplotypeScore=66.3688;InbreedingCoeff=0.2681;MQ=66.09;MQ0=23;MQRankSum=-1.794;QD=2.87;ReadPosRankSum=0.176;VQSLOD=1.5708;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:45.07:0,45,683	0/0:5,0:5:11.90:0,12,84	0/0:48,0:13:16.83:0,17,185	0/0:37,0:13:24.56:0,25,197	0/0:5,0:4:11.82:0,12,144	0/1:11,0:11:20.17:39,0,20	0/1:9,0:9:4.28:28,0,4	0/0:23,0:23:49.07:0,49,445	0/0:2,0:2:5.98:0,6,48	0/0:13,0:12:31.78:0,32,239	0/0:5,0:4:11.91:0,12,88	0/1:4,2:6:21.01:49,0,21	0/0:3,0:3:9.01:0,9,129	0/0:11,0:10:27.06:0,27,287	0/0:6,0:6:17.85:0,18,136	0/0:8,0:8:1.40:0,1,59	0/1:12,2:13:41.89:75,0,42	1/1:4,1:5:8.57:60,9,0	0/0:18,0:17:26.33:0,26,286	0/0:7,0:7:20.64:0,21,148	0/0:9,0:7:20.07:0,20,137	./.	./.	1/1:4,0:4:2.93:19,3,0	0/0:3,0:3:8.95:0,9,79	0/0:6,0:6:17.91:0,18,136	0/0:7,0:7:14.87:0,15,108	0/0:12,0:8:5.30:0,5,62
chr10	57268008	.	CT	C	898.36	PASS	AB=0.717;AC=37;AF=0.712;AN=52;BaseQRankSum=2.881;DP=302;FS=20.921;HRun=18;HaplotypeScore=55.2355;InbreedingCoeff=0.5488;MQ=65.65;MQ0=23;MQRankSum=0.040;QD=5.19;ReadPosRankSum=2.047;VQSLOD=0.8103;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:38.47:0,38,268	1/1:1,4:5:8.58:46,9,0	0/0:51,0:13:11.68:0,12,55	0/0:39,0:13:10.72:0,11,42	0/0:5,0:4:9.56:0,10,53	0/1:3,0:10:4.92:15,0,5	1/1:5,0:9:14.48:44,14,0	1/1:14,10:24:24.31:151,24,0	1/1:0,2:2:5.75:31,6,0	1/1:2,10:11:15.64:137,16,0	1/1:1,4:4:11.50:62,12,0	1/1:5,0:6:6.04:17,6,0	0/0:3,0:3:5.98:0,6,45	0/0:11,0:10:3.32:0,3,66	1/1:4,2:6:8.43:46,8,0	1/1:4,0:8:3.78:10,4,0	0/1:10,0:12:3.99:25,0,4	1/1:3,0:6:4.22:13,4,0	1/1:8,7:16:18.43:110,18,0	1/1:1,6:7:17.15:92,17,0	1/1:2,6:7:19.29:98,19,0	./.	./.	1/1:5,0:5:1.19:4,1,0	0/1:2,1:3:8.59:10,0,9	1/1:2,4:6:11.30:61,11,0	1/1:2,5:7:8.56:46,9,0	1/1:6,7:9:8.46:46,8,0
chr10	57269118	.	ATT	A	3056.26	PASS	AB=0.980;AC=39;AF=0.696;AN=56;BaseQRankSum=6.133;DP=404;FS=0.000;HRun=12;HaplotypeScore=63.8879;InbreedingCoeff=0.7810;MQ=57.34;MQ0=25;MQRankSum=0.409;QD=11.40;ReadPosRankSum=6.678;VQSLOD=1.3008;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:21:54.07:0,54,703	0/0:6,0:6:18.06:0,18,267	0/1:48,0:7:0.56:1,0,35	0/0:34,0:10:5.52:0,6,39	0/0:20,0:20:42.11:0,42,586	1/1:0,11:11:17.93:183,18,0	1/1:3,3:6:9:91,9,0	0/0:25,0:26:56.48:0,56,736	1/1:2,8:10:12.02:121,12,0	1/1:8,8:14:23.89:231,24,0	1/1:0,9:8:12.02:121,12,0	1/1:3,5:7:9.01:91,9,0	0/0:8,0:8:12.04:0,12,179	0/0:11,0:12:24.07:0,24,342	1/1:6,10:16:4.86:163,5,0	1/1:1,0:9:13.48:59,13,0	1/1:6,11:16:32.75:335,33,0	1/1:5,12:16:24.02:244,24,0	1/1:5,8:12:17.85:153,18,0	1/1:1,15:15:36.71:337,37,0	1/1:1,4:5:9.02:91,9,0	0/0:2,6:5:0:0,0,0	1/1:3,9:10:21.04:214,21,0	1/1:3,10:13:13.95:212,14,0	1/1:3,10:14:0.41:203,0,0	1/1:4,9:9:20.96:190,21,0	1/1:0,4:4:9.01:87,9,0	1/1:3,6:8:12.02:119,12,0
chr10	57271283	.	CACACACACACACACAT	C	3719.48	PASS	AB=1.000;AC=31;AF=0.554;AN=56;BaseQRankSum=-3.767;DP=589;FS=10.405;HRun=0;HaplotypeScore=188.4386;InbreedingCoeff=-0.0162;MQ=48.57;MQ0=45;MQRankSum=0.890;QD=8.98;ReadPosRankSum=-4.484;VQSLOD=0.2863;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:29:44.88:0,45,860	0/1:6,0:5:12.92:13,0,282	0/0:29,0:13:32.02:0,32,293	0/0:41,0:9:20.04:0,20,216	0/0:20,0:19:29.74:0,30,771	1/1:12,8:16:3.01:139,3,0	1/1:22,0:22:21.87:409,22,0	0/1:17,0:16:13.53:260,0,14	0/1:10,0:9:99:124,0,123	0/1:19,0:19:99:144,0,1145	0/1:9,0:9:76.33:76,0,320	1/1:10,0:9:14.83:115,15,0	0/0:26,0:25:59.82:0,60,2272	0/0:26,0:24:53.90:0,54,2123	0/1:17,0:15:60.85:61,0,705	1/1:8,21:29:5.08:277,5,0	1/1:22,0:20:5.13:455,5,0	1/1:22,0:21:27.55:269,28,0	0/1:13,0:11:99:117,0,547	0/1:21,0:21:99:176,0,848	0/1:49,0:42:99:343,0,873	1/1:12,0:12:16.22:126,16,0	1/1:14,0:13:14.98:123,15,0	1/1:7,19:26:2.61:139,3,0	0/1:17,0:16:26.16:26,0,566	0/1:25,0:24:99:121,0,1657	0/1:18,0:16:44.30:44,0,1408	0/1:16,0:15:99:164,0,481
chr10	57271297	.	CAT	C	6486.90	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-1.311;DP=591;FS=16.918;HRun=0;HaplotypeScore=78.9367;InbreedingCoeff=0.8936;MQ=63.68;MQ0=29;MQRankSum=-2.438;QD=16.06;ReadPosRankSum=2.302;VQSLOD=3.6481;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:31:56.69:0,57,432	1/1:4,0:4:11.98:99,12,0	0/0:40,0:23:62.06:0,62,593	0/0:51,0:19:49.98:0,50,497	0/0:21,0:20:38.88:0,39,309	1/1:10,0:8:2.99:23,3,0	1/1:23,0:23:53.11:423,53,0	1/1:21,0:21:59.93:512,60,0	1/1:10,0:10:26.92:213,27,0	1/1:17,5:22:62.83:529,63,0	1/1:13,0:13:30.40:240,30,0	1/1:10,0:10:26.46:196,26,0	0/0:18,2:20:10.53:0,11,376	0/0:22,0:22:31.99:0,32,355	1/1:16,0:15:38.89:330,39,0	1/1:21,0:21:5.98:46,6,0	1/1:25,0:24:65.63:504,66,0	1/1:21,0:21:45.14:332,45,0	1/1:18,0:16:38.74:326,39,0	1/1:24,1:25:36.43:413,36,0	1/1:48,0:44:81.14:631,81,0	1/1:9,0:9:22.21:174,22,0	1/1:9,0:9:17.97:147,18,0	1/1:20,0:20:2.65:22,3,0	1/1:20,0:19:26.38:219,26,0	1/1:24,0:23:40.51:459,41,0	1/1:19,0:18:37.75:296,38,0	1/1:16,0:16:44.83:353,45,0
chr10	57271781	.	CTCTT	C	938.29	PASS	AB=1.000;AC=7;AF=0.140;AN=50;BaseQRankSum=-3.495;DP=573;FS=17.985;HRun=0;HaplotypeScore=140.7533;InbreedingCoeff=0.3400;MQ=55.73;MQ0=1;MQRankSum=4.768;QD=7.22;ReadPosRankSum=1.364;VQSLOD=1.6257;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:13,13:26:8.47:350,8,0	0/0:7,0:7:2.50:0,3,38	./.	./.	1/1:13,14:27:36.12:534,36,0	0/0:22,0:22:12.28:0,12,77	0/0:19,0:19:6.38:0,6,39	./.	0/0:26,0:25:48.14:0,48,753	0/1:37,0:35:2.70:3,0,900	0/0:24,0:23:18.18:0,18,532	0/0:16,0:16:14.85:0,15,102	0/0:19,0:19:24.07:0,24,499	0/0:28,0:28:44.81:0,45,904	0/0:29,0:29:25.39:0,25,310	0/0:15,0:15:17.19:0,17,112	0/0:14,0:14:4.25:0,4,38	0/0:6,0:6:7.55:0,8,54	0/1:20,0:20:53.63:54,0,164	0/0:25,0:24:27.07:0,27,413	0/0:18,0:18:21.07:0,21,354	0/0:17,0:17:9.33:0,9,57	0/0:19,0:19:6.40:0,6,27	0/0:23,0:23:2.84:0,3,10	0/1:20,0:19:99:125,0,152	0/0:24,0:23:39.13:0,39,697	0/0:30,0:28:48.09:0,48,805	0/0:16,0:16:6.02:0,6,81
chr10	57271844	.	TTTTG	T	928.70	PASS	AB=0.981;AC=14;AF=0.250;AN=56;BaseQRankSum=7.268;DP=625;FS=1.039;HRun=0;HaplotypeScore=181.5018;InbreedingCoeff=-0.1624;MQ=50.47;MQ0=2;MQRankSum=-4.232;QD=3.25;ReadPosRankSum=-3.451;VQSLOD=2.1076;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:78.17:0,78,1662	0/1:8,0:8:15.77:16,0,432	0/0:14,0:5:14.20:0,14,215	0/0:21,0:14:39.25:0,39,739	0/0:29,0:29:78.16:0,78,1639	0/1:12,0:12:4.82:5,0,268	0/0:18,0:18:29.50:0,30,836	0/0:34,0:34:93.09:0,93,1892	0/1:30,0:29:99:129,0,1240	0/1:39,0:37:99:291,0,1302	0/1:25,0:28:99:163,0,1069	0/0:16,0:16:21.06:0,21,309	0/0:18,0:18:51.17:0,51,1143	0/0:28,0:28:81.28:0,81,1998	0/0:34,0:34:27.81:0,28,1845	0/0:32,0:32:12.54:0,13,803	0/1:10,0:11:10.59:11,0,152	0/0:9,0:9:15.05:0,15,269	0/0:17,0:17:45.10:0,45,799	0/0:20,9:28:11.89:0,12,1225	0/1:22,0:21:83.48:83,0,980	0/0:12,0:12:27.08:0,27,411	0/1:21,0:20:11.62:12,0,517	0/1:21,0:21:15.29:15,0,544	0/1:30,0:29:16.36:16,0,1482	0/1:23,0:25:99:152,0,1111	0/1:35,0:33:99:117,0,1444	1/1:2,0:2:6.02:74,6,0
chr10	57271851	.	CGTT	C	194.57	PASS	AB=0.882;AC=7;AF=0.125;AN=56;BaseQRankSum=8.031;DP=612;FS=0.638;HRun=0;HaplotypeScore=164.2744;InbreedingCoeff=0.0950;MQ=53.06;MQ0=0;MQRankSum=-5.765;QD=1.35;ReadPosRankSum=-1.982;VQSLOD=2.4711;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:81.22:0,81,1858	0/0:7,1:8:4.22:0,4,475	0/0:15,0:7:20.23:0,20,318	0/0:19,0:15:23.45:0,23,840	0/0:30,0:30:84.03:0,84,1868	0/0:9,0:9:21.07:0,21,448	0/0:18,0:18:51.17:0,51,1159	0/0:29,0:29:87.16:0,87,1865	0/1:24,5:28:32.08:32,0,974	0/1:28,7:33:99:166,0,956	0/1:25,5:29:36.67:37,0,810	0/0:13,0:13:24.01:0,24,528	0/0:18,0:18:54.15:0,54,1194	0/0:29,0:29:87.30:0,87,2084	0/0:36,1:37:88.03:0,88,1596	0/0:30,0:30:66.16:0,66,1370	0/0:10,0:10:2.56:0,3,226	0/0:7,0:7:15.05:0,15,347	0/0:15,0:15:45.15:0,45,688	0/0:31,0:30:52.68:0,53,1014	0/1:22,0:21:4.84:5,0,824	0/0:13,0:13:35.12:0,35,692	0/0:18,0:18:46.98:0,47,1037	0/0:21,0:21:37.44:0,37,772	0/0:27,0:26:78.25:0,78,1234	0/1:22,4:25:34.11:34,0,806	0/0:35,5:38:6.32:0,6,1474	1/1:1,1:2:5.98:46,6,0
chr10	57271864	.	T	TTTCCTTCC	9533.59	PASS	AB=0.521;AC=17;AF=0.304;AN=56;BaseQRankSum=-10.859;DP=659;FS=0.450;HRun=0;HaplotypeScore=190.6041;InbreedingCoeff=0.8764;MQ=54.88;MQ0=1;MQRankSum=-13.056;QD=50.98;ReadPosRankSum=2.055;VQSLOD=4.2969;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:60.20:0,60,1387	0/0:9,0:9:24.07:0,24,549	0/0:19,0:10:14.99:0,15,230	0/0:21,0:17:20.82:0,21,422	0/0:26,0:26:66.17:0,66,1560	1/1:1,12:15:15.05:626,15,0	1/1:12,10:25:15.05:627,15,0	0/0:26,0:26:45.12:0,45,784	0/0:29,0:28:57.18:0,57,1372	0/0:34,0:34:69.21:0,69,1506	0/0:31,0:30:66.22:0,66,1467	1/1:1,16:18:24.08:962,24,0	0/0:18,0:18:48.15:0,48,1075	0/0:30,0:30:60.21:0,60,1475	0/0:37,0:37:90.30:0,90,2166	0/1:3,33:38:17.89:2310,0,18	1/1:1,9:13:12.04:414,12,0	1/1:2,7:11:9.03:376,9,0	0/0:14,0:14:30.10:0,30,693	0/0:30,0:29:60.10:0,60,1317	0/0:21,0:21:51.16:0,51,1222	1/1:1,16:19:36.12:1336,36,0	1/1:2,20:24:51.17:1998,51,0	1/1:10,14:24:27.08:884,27,0	0/0:28,0:27:75.21:0,75,1749	0/0:26,0:26:63.22:0,63,1482	0/0:43,0:41:93.26:0,93,1964	0/0:4,0:4:6.02:0,6,103
chr10	57273503	.	C	CCAACAA	10586.57	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-2.422;DP=766;FS=0.000;HRun=0;HaplotypeScore=175.3600;InbreedingCoeff=0.9977;MQ=60.13;MQ0=1;MQRankSum=-14.267;QD=43.75;ReadPosRankSum=-2.932;VQSLOD=4.0781;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:42:87.21:0,87,1583	0/0:14,0:15:32.95:0,33,582	0/0:24,0:21:31.54:0,32,589	0/0:44,0:41:35.10:0,35,721	0/0:23,0:23:48.15:0,48,952	1/1:9,19:31:63.22:2006,63,0	1/1:7,10:18:24.08:761,24,0	0/0:33,0:34:50.25:0,50,841	0/0:31,0:31:72.25:0,72,1507	0/0:23,0:23:36.11:0,36,678	0/0:23,0:25:54.12:0,54,927	1/1:14,14:32:53.95:1359,54,0	0/0:23,0:23:54.13:0,54,1002	0/0:25,0:26:69.24:0,69,1416	0/0:31,0:31:78.25:0,78,1586	1/1:14,17:34:54.13:1632,54,0	1/1:11,9:22:30.10:924,30,0	1/1:10,9:20:21.07:622,21,0	0/0:18,0:19:29.46:0,29,545	0/0:22,0:22:39.15:0,39,794	0/0:52,0:52:99:0,129,2413	1/1:10,18:30:54.13:1377,54,0	1/1:8,15:25:45.85:1304,46,0	1/1:13,14:30:26.95:601,27,0	0/0:20,0:20:57.09:0,57,1016	0/0:33,0:33:26.43:0,26,1188	0/0:23,0:24:60.21:0,60,1232	0/0:13,0:13:21.02:0,21,323
chr10	57274063	.	A	ACC	13700.13	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-2.738;DP=615;FS=0.970;HRun=7;HaplotypeScore=90.1095;InbreedingCoeff=0.9854;MQ=72.56;MQ0=2;MQRankSum=-4.153;QD=26.00;ReadPosRankSum=1.095;VQSLOD=4.2777;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,0:30:67.37:237,67,0	1/1:2,13:15:42.14:661,42,0	0/0:15,0:18:41.91:0,42,439	0/0:13,0:13:26.08:0,26,270	1/1:1,0:30:62.05:227,62,0	1/1:4,0:22:33.05:319,33,0	1/1:5,0:20:18.03:179,18,0	1/1:9,17:26:48.16:788,48,0	1/1:4,16:22:47.65:734,48,0	1/1:5,28:32:75.23:1203,75,0	1/1:2,15:17:33.11:541,33,0	1/1:5,0:26:36.06:349,36,0	0/0:25,0:25:75.22:0,75,874	0/0:32,0:32:84.21:0,84,958	1/1:5,23:28:60.20:985,60,0	1/1:6,0:29:57.10:563,57,0	1/1:5,0:17:33.05:319,33,0	1/1:2,0:6:18.03:174,18,0	1/1:5,16:21:48.03:750,48,0	1/1:5,27:34:81.11:1191,81,0	1/1:3,21:25:54.18:886,54,0	1/1:5,1:24:30.01:283,30,0	1/1:3,0:14:24:223,24,0	1/1:2,0:10:15.02:145,15,0	1/1:0,20:21:51.17:837,51,0	1/1:0,22:23:59.69:935,60,0	1/1:2,23:27:56.93:928,57,0	1/1:0,6:6:15.05:245,15,0
chr10	57278293	.	GC	G	243.66	PASS	AC=16;AF=0.296;AN=54;BaseQRankSum=1.492;DP=527;FS=6.543;HRun=1;HaplotypeScore=53.2806;InbreedingCoeff=0.7734;MQ=105.05;MQ0=0;MQRankSum=-3.502;QD=16.24;ReadPosRankSum=-4.318;VQSLOD=1.9303;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,144,2266	0/0:9,0:9:27.07:0,27,408	0/0:33,0:33:99:0,99,1481	0/0:32,0:32:90.24:0,90,1354	0/0:27,0:27:78.27:0,78,1234	1/1:1,0:1:3.01:42,3,0	1/1:0,2:2:6.02:79,6,0	0/0:26,0:26:75.23:0,75,1136	0/0:24,0:24:72.25:0,72,1151	0/0:21,0:21:63.21:0,63,995	0/0:15,0:15:39.13:0,39,623	1/1:1,0:1:3.01:42,3,0	0/0:34,0:34:99:0,99,1532	0/0:30,0:30:87.27:0,87,1343	0/0:36,0:36:99:0,105,1648	1/1:1,0:1:3.01:42,3,0	1/1:0,5:5:3.01:41,3,0	1/1:0,1:1:3.01:42,3,0	0/0:19,0:19:57.19:0,57,911	0/0:22,0:22:66.20:0,66,1006	0/0:41,0:40:99:0,120,1887	1/1:3,0:3:9.02:97,9,0	1/1:1,0:1:2.97:20,3,0	./.	0/0:17,0:17:48.16:0,48,764	0/0:28,0:28:78.25:0,78,1219	0/0:33,0:33:96.33:0,96,1528	0/0:11,0:11:33.11:0,33,523
chr10	57278731	.	G	GC	71.42	PASS	AB=1.000;AC=9;AF=0.173;AN=52;BaseQRankSum=3.617;DP=526;FS=1.429;HRun=0;HaplotypeScore=58.2701;InbreedingCoeff=0.6210;MQ=107.46;MQ0=0;MQRankSum=-2.856;QD=3.76;ReadPosRankSum=-4.426;VQSLOD=1.9550;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,157,2181	0/0:8,0:8:24.08:0,24,335	0/0:35,0:35:99:0,102,1376	0/0:37,0:37:99:0,105,1403	0/0:25,0:25:72.24:0,72,1005	1/1:3,0:3:2.91:24,3,0	1/1:1,4:5:5.93:68,6,0	0/0:29,0:29:84.26:0,84,1144	0/0:24,0:24:72.24:0,72,1006	0/0:22,0:22:63.21:0,63,880	0/0:15,0:15:45.15:0,45,629	1/1:4,0:4:2.75:32,3,0	0/0:32,0:32:93.24:0,93,1268	0/0:26,0:26:75.25:0,75,1047	0/0:39,0:39:99:0,117,1635	0/1:6,0:6:33.03:48,0,33	0/0:3,0:3:0:0,0,0	0/0:2,0:2:0:0,0,0	0/0:25,0:25:75.25:0,75,1049	0/0:18,0:18:54.17:0,54,734	0/0:52,0:52:99:0,153,2106	./.	0/0:1,0:1:0:0,0,0	1/1:1,0:1:3:25,3,0	0/0:21,0:21:63.21:0,63,881	0/0:24,0:24:72.23:0,72,990	0/0:17,0:17:51.17:0,51,712	./.
chr10	57278899	.	T	TC	24858.21	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-13.597;DP=783;FS=1.832;HRun=1;HaplotypeScore=71.0972;InbreedingCoeff=0.9996;MQ=87.61;MQ0=0;MQRankSum=-8.112;QD=40.95;ReadPosRankSum=1.991;VQSLOD=5.5013;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,135,1753	1/1:0,9:9:24.08:360,24,0	0/0:33,0:33:96.28:0,96,1202	0/0:28,0:28:56.19:0,56,858	0/0:18,0:18:54.18:0,54,701	1/1:0,28:28:78.26:1168,78,0	1/1:2,31:33:90.30:1349,90,0	1/1:3,32:35:96.30:1415,96,0	1/1:1,33:34:99:1482,99,0	1/1:1,23:24:69.20:1011,69,0	1/1:1,16:17:45.15:674,45,0	1/1:2,49:51:99:2022,135,0	0/0:28,0:28:84.26:0,84,1075	0/0:23,0:23:60.19:0,60,779	1/1:0,39:39:99:1709,114,0	1/1:0,36:36:99:1572,105,0	1/1:1,31:32:84.28:1259,84,0	1/1:1,19:20:51.17:764,51,0	1/1:0,23:23:69.23:1034,69,0	1/1:0,21:21:60.19:878,60,0	1/1:2,54:56:99:2114,141,0	1/1:0,20:20:51.17:763,51,0	1/1:0,19:19:51.17:763,51,0	1/1:0,33:33:87.29:1304,87,0	1/1:1,15:16:48.15:701,48,0	1/1:0,20:20:60.20:900,60,0	1/1:0,22:22:63.21:944,63,0	1/1:0,19:19:45.15:674,45,0
chr10	57280720	.	C	CGT	1990.07	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-8.530;DP=820;FS=3.702;HRun=0;HaplotypeScore=96.3818;InbreedingCoeff=0.9954;MQ=87.02;MQ0=0;MQRankSum=-2.210;QD=38.27;ReadPosRankSum=-4.415;VQSLOD=4.2060;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,111,1461	1/1:2,10:12:30.10:518,30,0	0/0:25,0:25:66.22:0,66,872	0/0:35,0:35:75.15:0,75,945	0/0:18,0:18:42.12:0,42,544	0/0:23,0:23:66.22:0,66,878	0/0:34,0:34:93.29:0,93,1222	1/1:8,31:40:96.31:1594,96,0	0/0:29,0:29:78.26:0,78,1037	0/0:30,0:31:84.23:0,84,1073	0/0:9,0:9:18.06:0,18,240	0/0:60,0:60:99:0,163,2140	0/0:35,0:35:84.28:0,84,1116	0/0:28,0:28:72.24:0,72,959	0/0:45,0:45:99:0,135,1781	0/0:32,0:32:87.27:0,87,1143	0/0:35,0:35:96.27:0,96,1256	0/0:21,0:21:54.18:0,54,719	0/0:22,0:22:54.18:0,54,719	0/0:12,0:12:33.11:0,33,439	0/0:77,0:77:99:0,208,2739	0/0:18,0:18:51.16:0,51,664	0/0:14,0:14:39.11:0,39,503	0/0:34,0:34:90.30:0,90,1197	0/0:18,0:18:45.15:0,45,599	0/0:29,0:29:69.20:0,69,889	0/0:26,0:26:72.24:0,72,958	0/0:18,0:18:54.18:0,54,719
chr10	57284287	.	T	TA	12882.40	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-14.810;DP=771;FS=3.902;HRun=3;HaplotypeScore=73.4945;InbreedingCoeff=0.9978;MQ=81.25;MQ0=0;MQRankSum=0.533;QD=38.00;ReadPosRankSum=0.743;VQSLOD=5.2556;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,99,1173	1/1:0,5:5:15.05:210,15,0	0/0:19,0:19:48.07:0,48,523	0/0:28,0:27:61.99:0,62,723	0/0:32,0:32:84.13:0,84,960	0/0:25,0:25:69.07:0,69,749	0/0:19,0:19:51.15:0,51,609	1/1:1,21:22:63.18:833,63,0	1/1:0,35:35:93.26:1277,93,0	1/1:1,34:35:99:1392,102,0	1/1:3,12:15:39.10:524,39,0	0/0:46,0:46:99:0,135,1570	0/0:22,0:22:63.16:0,63,731	0/0:24,0:24:66.16:0,66,775	1/1:1,45:46:99:1835,132,0	0/0:43,0:43:99:0,129,1446	0/0:32,0:32:90.12:0,90,1028	0/0:20,0:20:60.13:0,60,691	1/1:1,12:13:36.10:472,36,0	1/1:2,24:26:72.20:980,72,0	1/1:1,26:27:72.24:1007,72,0	0/0:35,0:35:99:0,99,1139	0/0:22,0:22:60.17:0,60,707	0/0:30,0:30:87.07:0,87,966	1/1:0,25:25:60.20:840,60,0	1/1:1,41:42:99:1666,123,0	1/1:2,32:34:98.84:1260,99,0	1/1:0,14:14:42.14:588,42,0
chr10	57286094	.	C	CT	4709.49	PASS	AB=1.000;AC=27;AF=0.482;AN=56;BaseQRankSum=-1.352;DP=597;FS=14.586;HRun=11;HaplotypeScore=86.7816;InbreedingCoeff=0.8943;MQ=63.29;MQ0=2;MQRankSum=-2.555;QD=17.06;ReadPosRankSum=-1.752;VQSLOD=3.8775;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,1:29:40.30:0,40,486	1/1:3,4:7:9.48:118,9,0	0/0:11,0:9:13.99:0,14,98	0/1:16,0:11:14.05:14,0,55	0/0:33,0:34:46.91:0,47,430	0/0:15,0:14:32.84:0,33,255	0/0:18,1:22:11.48:0,11,240	1/1:10,16:26:27.82:448,28,0	1/1:1,10:11:24.05:244,24,0	1/1:6,22:28:63.09:629,63,0	1/1:4,15:20:15.79:330,16,0	0/0:22,0:23:25.19:0,25,327	0/0:23,0:24:61.74:0,62,465	0/0:16,0:18:39.92:0,40,290	1/1:7,17:25:27.70:448,28,0	0/0:30,2:32:7.76:0,8,422	0/0:25,0:25:59.38:0,59,451	0/0:15,0:15:31.31:0,31,253	1/1:11,16:27:21.84:396,22,0	1/1:6,28:35:36.68:528,37,0	1/1:9,9:18:24.05:244,24,0	0/0:23,0:23:14.02:0,14,254	0/0:26,0:26:62.72:0,63,487	0/0:23,0:22:41.71:0,42,309	1/1:5,13:18:12.84:312,13,0	1/1:5,13:18:45.05:447,45,0	1/1:5,12:17:15.81:331,16,0	1/1:2,7:9:23.41:222,23,0
chr10	57286106	.	AC	A	1055.51	PASS	AB=0.813;AC=10;AF=0.179;AN=56;BaseQRankSum=11.909;DP=634;FS=153.698;HRun=1;HaplotypeScore=129.9367;InbreedingCoeff=-0.2232;MQ=55.39;MQ0=2;MQRankSum=-10.020;QD=4.38;ReadPosRankSum=2.008;VQSLOD=0.3099;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:86.96:0,87,1290	0/1:4,1:5:19.91:20,0,128	0/0:11,0:8:14.14:0,14,279	0/0:15,0:9:18.33:0,18,235	0/0:28,1:29:44.86:0,45,1107	0/0:14,0:13:42.13:0,42,641	0/0:22,0:22:59.51:0,60,834	0/0:23,0:22:66.14:0,66,899	0/1:12,9:21:99:275,0,375	0/1:26,5:31:95.01:95,0,953	0/1:19,5:24:99:102,0,732	0/0:23,0:23:65.80:0,66,967	0/0:24,0:24:72.23:0,72,1116	0/0:17,0:17:51.10:0,51,754	0/1:22,5:27:99:105,0,791	0/0:38,0:38:99:0,108,1614	0/0:25,1:26:49.65:0,50,991	0/0:15,2:17:7.51:0,8,615	0/0:17,2:18:12.03:0,12,630	0/1:33,4:37:14.47:14,0,1120	0/0:12,0:12:33.11:0,33,482	0/0:22,0:22:53.20:0,53,800	0/0:26,0:26:78.20:0,78,1165	0/0:26,0:25:71.98:0,72,984	0/1:18,11:29:99:215,0,627	0/1:21,4:25:75.87:76,0,729	0/1:20,4:24:88.05:88,0,620	0/1:11,7:18:99:210,0,368
chr10	57287770	.	A	AAG	731.28	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-2.079;DP=441;FS=2.518;HRun=0;HaplotypeScore=58.9922;InbreedingCoeff=0.7783;MQ=52.39;MQ0=30;MQRankSum=1.292;QD=14.63;ReadPosRankSum=1.600;VQSLOD=3.3264;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,9:14:11.24:297,11,0	0/0:5,0:5:11.98:0,12,103	0/0:29,0:9:6.23:0,6,33	0/0:43,0:8:6.21:0,6,45	1/1:4,25:32:41.76:549,42,0	0/0:15,0:15:30.05:0,30,313	0/0:8,0:8:17.97:0,18,173	0/0:16,0:12:33.34:0,33,265	0/0:14,0:14:29.90:0,30,244	0/0:18,0:16:44.90:0,45,382	0/0:24,0:24:50.69:0,51,411	0/0:5,0:5:8.68:0,9,58	0/0:12,0:11:27.02:0,27,243	0/0:9,0:8:17.14:0,17,145	0/0:12,0:10:27:0,27,239	0/0:6,0:3:8.91:0,9,62	0/0:24,0:22:43.21:0,43,286	0/0:21,0:17:42.63:0,43,310	0/0:15,0:14:32.92:0,33,274	0/0:14,0:13:38.89:0,39,317	0/0:4,0:4:10.56:0,11,84	0/0:9,0:8:15:0,15,133	0/0:11,0:10:26.88:0,27,225	0/0:10,0:8:11.38:0,11,117	0/0:23,0:23:55.95:0,56,472	0/0:20,0:18:53.87:0,54,453	0/0:13,0:13:30.89:0,31,265	0/0:11,0:10:21:0,21,187
chr10	57288730	.	G	GA	9069.50	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=10.102;DP=673;FS=9.025;HRun=8;HaplotypeScore=87.5588;InbreedingCoeff=0.9565;MQ=72.23;MQ0=1;MQRankSum=0.908;QD=27.99;ReadPosRankSum=0.676;VQSLOD=4.7619;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:57.02:0,57,520	1/1:0,4:4:12.04:138,12,0	0/0:34,0:28:59.92:0,60,516	0/0:24,0:20:4.15:0,4,124	0/0:33,0:33:87.05:0,87,795	0/0:20,0:20:51.03:0,51,467	0/0:18,0:18:48.03:0,48,439	1/1:8,22:30:57.12:626,57,0	1/1:5,23:28:51.15:589,51,0	1/1:3,28:31:87.23:984,87,0	1/1:2,23:25:66.20:762,66,0	0/0:20,0:20:54.03:0,54,494	0/0:12,1:13:4.36:0,4,282	0/0:19,0:19:54.02:0,54,494	1/1:3,26:29:75.22:866,75,0	0/0:23,0:23:63.03:0,63,576	0/0:43,0:43:99:0,105,960	0/0:24,0:24:65.98:0,66,595	1/1:5,26:30:75.22:861,75,0	1/1:6,31:37:66.11:1009,66,0	1/1:3,13:16:36.11:415,36,0	0/0:16,0:16:39.01:0,39,357	0/0:24,0:24:66.03:0,66,604	0/0:16,0:16:45.02:0,45,412	1/1:3,33:36:90.07:1039,90,0	1/1:1,22:23:69.20:794,69,0	1/1:1,21:23:60.16:675,60,0	1/1:0,11:11:27.08:312,27,0
chr10	57289090	.	TA	T	11535.82	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=19.808;DP=767;FS=1.168;HRun=2;HaplotypeScore=92.9340;InbreedingCoeff=0.9998;MQ=93.45;MQ0=0;MQRankSum=-2.430;QD=36.39;ReadPosRankSum=2.781;VQSLOD=5.2996;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:57:99:0,169,2473	1/1:0,11:11:33.11:426,33,0	0/0:32,0:32:85.13:0,85,1221	0/0:36,0:36:99:0,99,1296	0/0:26,0:26:78.26:0,78,1168	0/0:21,0:21:63.21:0,63,944	0/0:28,0:28:75.24:0,75,1103	1/1:1,31:32:90.28:1156,90,0	1/1:0,20:20:50.95:662,51,0	1/1:0,29:29:87.24:1096,87,0	1/1:1,18:19:51.17:662,51,0	0/0:40,0:40:99:0,120,1777	0/0:28,0:28:84.27:0,84,1238	0/0:20,0:20:60.20:0,60,898	1/1:0,41:41:99:1480,114,0	0/0:33,0:33:99:0,99,1443	0/0:30,0:30:90.29:0,90,1328	0/0:23,0:23:66.19:0,66,947	1/1:0,24:24:72.21:918,72,0	1/1:0,31:31:93.20:1168,93,0	1/1:0,31:31:84.27:1090,84,0	0/0:28,0:28:84.27:0,84,1238	0/0:23,0:23:69.22:0,69,1014	0/0:25,0:25:75.23:0,75,1086	1/1:1,17:18:45.15:584,45,0	1/1:0,23:23:69.22:895,69,0	1/1:1,28:29:81.03:1048,81,0	1/1:0,9:9:27.09:350,27,0
chr10	57289553	.	TACAAGTC	T	2790.46	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=1.543;DP=610;FS=0.620;HRun=0;HaplotypeScore=171.7560;InbreedingCoeff=0.9491;MQ=91.91;MQ0=0;MQRankSum=-10.079;QD=56.95;ReadPosRankSum=2.463;VQSLOD=3.5650;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:60,0:60:99:0,163,6456	0/0:7,0:7:21.07:0,21,660	0/0:26,0:26:69.22:0,69,2412	0/0:31,0:31:86.33:0,86,3106	0/0:17,0:17:48.16:0,48,1783	0/0:14,0:14:42.14:0,42,1684	0/0:23,0:23:66.21:0,66,2444	0/0:23,0:23:66.23:0,66,1975	0/0:21,0:21:60.21:0,60,1872	0/0:12,0:12:36.12:0,36,1055	0/0:15,0:15:42.13:0,42,1232	0/0:41,0:41:99:0,120,4677	0/0:29,0:29:84.29:0,84,3298	0/0:26,0:26:78.23:0,78,2952	0/0:34,0:34:96.33:0,96,2934	1/1:0,26:26:63.22:1660,63,0	1/1:2,17:19:42.14:1107,42,0	1/1:1,3:4:6.02:158,6,0	0/0:21,0:21:51.17:0,51,1527	0/0:15,0:15:45.15:0,45,1345	0/0:24,0:24:72.22:0,72,2077	0/0:13,0:13:39.13:0,39,1531	0/0:15,0:15:42.14:0,42,1585	0/0:26,0:26:72.23:0,72,2805	0/0:13,0:13:36.12:0,36,1067	0/0:28,0:28:84.29:0,84,2444	0/0:23,0:23:69.24:0,69,2103	0/0:4,0:4:12.04:0,12,384
chr10	57290035	.	CTTCCTTCCTTCCT	C	959.05	PASS	AB=0.969;AC=8;AF=0.143;AN=56;BaseQRankSum=4.844;DP=335;FS=0.948;HRun=0;HaplotypeScore=142.3568;InbreedingCoeff=0.0697;MQ=42.62;MQ0=20;MQRankSum=-5.374;QD=10.54;ReadPosRankSum=2.663;VQSLOD=2.0905;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:12:31.05:0,31,687	0/0:1,0:1:3.01:0,3,105	0/0:24,0:6:14.81:0,15,205	0/0:20,0:5:4.21:0,4,154	0/0:9,0:9:26.76:0,27,817	0/0:16,0:16:48.16:0,48,2537	0/0:19,0:19:54.17:0,54,2179	0/0:15,0:13:38.73:0,39,509	0/0:8,0:8:17.62:0,18,184	0/1:10,0:8:18.46:18,0,235	0/0:5,0:5:14.14:0,14,82	0/0:11,0:11:33.07:0,33,1577	0/0:12,0:11:33.11:0,33,1830	0/0:13,0:13:33.11:0,33,1498	0/0:12,0:12:26.06:0,26,268	0/1:9,0:9:25.78:114,0,26	0/1:10,3:6:35.10:345,0,35	1/1:8,4:8:15.03:498,15,0	0/0:7,0:6:9.68:0,10,105	0/0:7,0:6:17.53:0,18,209	0/0:3,0:3:4.99:0,5,25	0/0:11,0:11:30.10:0,30,1649	0/0:8,0:7:18.06:0,18,804	0/0:20,0:19:19.11:0,19,2334	0/1:12,0:12:6.38:6,0,331	0/1:14,0:10:37.21:37,0,262	0/1:21,0:19:76.49:76,0,537	0/0:6,0:5:10.84:0,11,143
chr10	57290039	.	CTTCCTTCCT	C	1403.39	PASS	AB=0.995;AC=14;AF=0.250;AN=56;BaseQRankSum=8.607;DP=347;FS=12.473;HRun=0;HaplotypeScore=121.3438;InbreedingCoeff=0.0517;MQ=42.02;MQ0=20;MQRankSum=-5.764;QD=10.55;ReadPosRankSum=5.378;VQSLOD=1.3829;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:12:30.68:0,31,363	0/0:1,0:1:3.01:0,3,63	0/0:23,0:7:14.81:0,15,205	0/0:25,0:6:7.16:0,7,173	0/0:9,0:9:26.71:0,27,435	0/0:17,0:17:48.16:0,48,1849	0/0:22,0:22:57.18:0,57,1593	0/0:15,0:13:20.09:0,20,225	0/1:9,0:8:42.33:42,0,45	0/1:11,0:8:65.20:101,0,65	0/1:5,0:5:0.92:47,0,1	0/0:12,0:12:33.11:0,33,1195	0/0:12,0:11:33.11:0,33,1374	0/0:13,0:13:33.11:0,33,1141	0/1:12,0:12:27.72:103,0,28	1/1:6,4:10:12.04:280,12,0	0/1:14,0:7:34.46:202,0,34	1/1:12,0:8:15.03:307,15,0	0/1:8,0:7:10.09:15,0,10	0/1:7,0:6:24.29:24,0,51	0/0:3,0:3:2.96:0,3,19	0/0:11,0:11:30.10:0,30,1208	0/0:8,0:7:18.03:0,18,555	0/0:21,0:20:20.34:0,20,1669	0/1:10,0:10:83.05:105,0,83	0/1:14,0:10:81.72:82,0,101	0/1:20,0:19:99:257,0,166	0/0:6,0:5:5.03:0,5,31
chr10	57290046	.	CCTTCCT	C	2051.76	PASS	AB=0.892;AC=24;AF=0.429;AN=56;BaseQRankSum=9.380;DP=348;FS=0.666;HRun=0;HaplotypeScore=101.8997;InbreedingCoeff=0.3344;MQ=42.87;MQ0=22;MQRankSum=-4.088;QD=12.14;ReadPosRankSum=4.530;VQSLOD=2.3264;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:12:6.73:87,7,0	0/0:1,0:1:0.47:0,0,1	0/0:32,0:11:17.10:0,17,255	0/0:29,0:7:19.04:0,19,250	1/1:9,0:9:9.40:125,9,0	0/0:16,0:16:48.16:0,48,1270	0/0:22,0:22:53.90:0,54,1037	0/1:15,0:13:8.37:8,0,122	0/1:6,2:7:4.76:105,0,5	0/1:7,3:7:16.22:152,0,16	1/1:1,3:4:5.48:164,5,0	0/0:11,0:11:33.10:0,33,813	0/0:12,0:11:33.11:0,33,905	0/0:12,0:12:30.10:0,30,748	1/1:7,5:12:2.82:313,3,0	1/1:9,0:9:5.26:116,5,0	0/1:14,0:7:9.53:110,0,10	1/1:13,0:9:8.52:163,9,0	0/1:7,1:7:16.63:62,0,17	0/1:4,2:5:12.85:104,0,13	0/0:2,1:3:4.98:0,5,24	0/0:11,0:11:30.10:0,30,802	0/0:7,0:6:14.92:0,15,376	0/0:22,0:21:57.60:0,58,1283	1/1:4,4:8:11.44:244,11,0	0/1:12,1:9:22.06:96,0,22	1/1:14,6:18:0.80:375,1,0	0/1:4,0:3:0:0,0,0
chr10	57290047	.	CT	C	413.09	PASS	AB=0.973;AC=20;AF=0.370;AN=54;BaseQRankSum=8.358;DP=336;FS=4.334;HRun=2;HaplotypeScore=79.2823;InbreedingCoeff=0.1556;MQ=43.11;MQ0=23;MQRankSum=-3.058;QD=2.89;ReadPosRankSum=3.286;VQSLOD=0.1333;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:10,6:12:41.72:97,0,42	1/1:1,0:1:2.96:19,3,0	0/0:33,0:11:17.82:0,18,232	0/0:30,0:7:1.52:0,2,165	1/1:6,3:9:6.33:119,6,0	0/0:16,0:16:48.16:0,48,698	0/0:21,0:21:49.92:0,50,644	0/0:13,0:11:8.83:0,9,138	0/1:6,0:5:10.48:10,0,10	0/1:9,0:6:13.79:14,0,20	1/1:4,0:4:0.90:20,1,0	0/0:11,0:11:30.10:0,30,434	0/0:12,0:11:33.11:0,33,486	0/0:12,0:12:30.10:0,30,430	0/1:12,0:12:14.73:21,0,15	1/1:9,0:9:4.89:64,5,0	0/1:14,0:7:33.97:35,0,34	1/1:13,0:9:17.43:112,17,0	0/1:9,0:8:3.65:4,0,9	0/1:5,0:4:6.49:6,0,14	0/0:3,0:3:5.55:0,6,28	0/0:11,0:11:30.10:0,30,431	0/0:7,0:6:14.26:0,14,183	0/0:22,0:21:22.41:0,22,681	0/1:7,0:7:1.27:24,0,1	0/1:11,0:7:2.84:3,0,37	0/1:18,0:16:25.16:25,0,47	./.
chr10	57290051	.	CT	C	721.96	PASS	AB=0.970;AC=19;AF=0.365;AN=52;BaseQRankSum=9.446;DP=328;FS=11.764;HRun=1;HaplotypeScore=79.3809;InbreedingCoeff=0.2102;MQ=42.57;MQ0=21;MQRankSum=-4.710;QD=5.23;ReadPosRankSum=3.572;VQSLOD=-0.5896;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:10,6:12:27.33:99,0,27	./.	0/0:35,1:12:10.76:0,11,217	0/0:30,0:7:20.78:0,21,241	1/1:5,3:8:12.14:116,12,0	0/0:15,0:15:45.11:0,45,573	0/0:18,0:18:44.87:0,45,574	0/0:13,0:11:1.24:0,1,91	0/1:6,0:5:0.64:29,0,1	0/1:9,0:6:17.83:37,0,18	1/1:4,0:4:1.36:45,1,0	0/0:10,0:10:30.09:0,30,395	0/0:13,0:12:35.99:0,36,376	0/0:12,0:12:30.05:0,30,366	0/1:10,0:10:14.92:71,0,15	1/1:9,0:9:10.61:71,11,0	0/1:14,0:7:8.24:42,0,8	1/1:13,0:9:17.82:129,18,0	0/1:9,0:8:8.50:9,0,33	0/1:5,0:4:11.94:28,0,12	0/0:3,0:3:5.62:0,6,28	0/0:11,0:11:27.07:0,27,355	0/0:5,0:5:14.78:0,15,179	0/0:21,0:20:27.84:0,28,626	1/1:7,0:7:7.47:88,7,0	0/1:10,0:6:19.70:20,0,24	0/1:18,0:16:24.17:105,0,24	./.
chr10	57290059	.	C	CCCT	523.72	PASS	AB=1.000;AC=12;AF=0.231;AN=52;BaseQRankSum=4.660;DP=314;FS=3.990;HRun=0;HaplotypeScore=92.2071;InbreedingCoeff=0.4996;MQ=41.19;MQ0=23;MQRankSum=-1.506;QD=6.89;ReadPosRankSum=-0.535;VQSLOD=2.1794;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:10:23.35:138,23,0	./.	0/0:40,0:13:28.02:0,28,348	0/0:32,0:7:21.06:0,21,299	1/1:7,0:7:8.36:39,8,0	0/0:12,0:12:36.12:0,36,573	0/0:17,0:17:42.14:0,42,667	0/0:11,0:9:5.11:0,5,50	0/1:6,0:5:10.55:12,0,11	0/1:10,0:7:8.86:9,0,31	0/1:4,0:4:7.66:8,0,24	0/0:10,0:10:30.03:0,30,383	0/0:9,0:8:21.06:0,21,301	0/0:10,0:10:27.04:0,27,380	0/0:10,0:10:19.06:0,19,87	1/1:7,1:8:13.55:145,14,0	0/1:14,0:7:32.41:93,0,32	1/1:8,5:9:18.04:241,18,0	0/0:7,0:6:9.65:0,10,34	0/0:5,0:4:7.88:0,8,39	0/0:4,0:4:1.99:0,2,6	0/0:9,0:9:24.04:0,24,331	0/0:5,0:5:15.04:0,15,217	0/0:20,0:19:22.91:0,23,656	0/0:7,0:7:13.41:0,13,68	0/0:11,0:7:8.37:0,8,33	0/0:18,0:16:16.69:0,17,130	./.
chr10	57290060	.	CTCT	C	2419.61	PASS	AB=0.884;AC=25;AF=0.481;AN=52;BaseQRankSum=6.779;DP=308;FS=24.088;HRun=0;HaplotypeScore=81.5739;InbreedingCoeff=0.6137;MQ=41.34;MQ0=22;MQRankSum=-5.459;QD=14.75;ReadPosRankSum=0.681;VQSLOD=1.6629;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:9:23.70:0,24,164	./.	0/1:40,0:13:5.72:6,0,462	0/0:32,0:7:21.07:0,21,448	0/0:7,0:7:17.78:0,18,151	0/0:12,0:12:36.12:0,36,800	0/0:17,0:17:42.14:0,42,941	1/1:10,0:9:11.80:75,12,0	1/1:2,2:5:12.04:161,12,0	1/1:5,4:6:16.92:211,17,0	1/1:3,1:4:12.04:167,12,0	0/0:10,0:10:30.04:0,30,517	0/0:8,0:7:21.07:0,21,443	0/0:10,0:10:27.03:0,27,502	1/1:5,4:10:29.97:408,30,0	0/1:4,0:6:26.45:40,0,26	0/1:13,0:7:26.52:27,0,99	0/1:14,0:11:10.46:10,0,38	1/1:3,2:6:15.04:216,15,0	1/1:3,1:3:9.03:133,9,0	0/1:3,1:4:7.35:53,0,7	0/0:9,0:9:24.04:0,24,458	0/0:5,0:5:15.04:0,15,283	0/0:20,0:19:51.04:0,51,1001	1/1:5,1:6:15.05:217,15,0	1/1:2,7:7:18.53:282,19,0	1/1:11,6:16:39.71:612,40,0	./.
chr10	57290062	.	CTCTCTTTCCTTCTTTCTTTCTT	C	2565.03	PASS	AB=1.000;AC=28;AF=0.538;AN=52;BaseQRankSum=9.343;DP=302;FS=4.119;HRun=0;HaplotypeScore=164.3049;InbreedingCoeff=0.6963;MQ=41.14;MQ0=21;MQRankSum=-6.300;QD=17.94;ReadPosRankSum=1.146;VQSLOD=2.1367;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:9:24.08:338,24,0	./.	0/0:40,0:13:20.35:0,20,379	0/0:31,0:7:21.07:0,21,429	1/1:7,0:7:12.58:171,13,0	0/0:12,0:12:36.12:0,36,1143	0/0:17,0:17:42.14:0,42,1228	1/1:9,0:8:10.46:65,10,0	1/1:4,2:5:9.90:357,10,0	1/1:9,0:6:12.48:118,12,0	1/1:4,0:4:10.20:74,10,0	0/0:9,0:9:24.07:0,24,847	0/0:8,0:7:18.06:0,18,649	0/0:10,0:10:24.08:0,24,753	1/1:9,1:10:28.48:342,28,0	0/1:6,0:6:8.80:9,0,50	0/1:14,0:7:3.64:4,0,283	0/1:15,0:11:3.28:84,0,3	1/1:6,0:6:14.90:168,15,0	1/1:4,0:3:8.98:77,9,0	0/1:4,0:4:24.98:25,0,162	0/0:8,0:8:18.06:0,18,471	0/0:5,0:5:12.04:0,12,281	0/0:18,0:17:48.16:0,48,1946	1/1:6,0:6:14.96:124,15,0	1/1:9,2:7:18.51:460,19,0	1/1:18,0:16:42.28:350,42,0	./.
chr10	57290071	.	CTTCTTTCT	C	879.86	PASS	AB=0.970;AC=19;AF=0.792;AN=24;BaseQRankSum=-0.433;DP=275;FS=7.166;HRun=0;HaplotypeScore=99.7646;InbreedingCoeff=-0.1047;MQ=42.92;MQ0=15;MQRankSum=-0.100;QD=6.67;ReadPosRankSum=-0.433;VQSLOD=0.9705;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	./.	1/1:11,4:15:3.01:74,3,0	0/1:18,0:18:32.84:83,0,33	./.	1/1:4,0:3:6.02:105,6,0	./.	./.	1/1:4,6:10:5.96:147,6,0	./.	1/1:6,5:11:6.02:147,6,0	1/1:9,0:9:3:28,3,0	1/1:4,0:4:3.01:52,3,0	0/1:14,0:7:12.01:16,0,12	1/1:15,0:12:2.88:15,3,0	./.	./.	0/0:4,0:4:3.01:0,3,40	./.	./.	0/1:18,2:19:99:197,0,190	./.	1/1:12,0:7:6.02:111,6,0	./.	./.
chr10	57290676	.	GA	G	1218.43	PASS	AB=1.000;AC=27;AF=0.500;AN=54;BaseQRankSum=11.169;DP=463;FS=23.816;HRun=10;HaplotypeScore=91.4106;InbreedingCoeff=0.4388;MQ=47.56;MQ0=18;MQRankSum=-6.688;QD=4.82;ReadPosRankSum=1.720;VQSLOD=0.2473;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,32:34:50.80:670,51,0	1/1:2,0:2:0.47:1,0,0	./.	0/0:14,0:2:6.01:0,6,59	1/1:8,22:29:56.95:493,57,0	0/0:19,0:19:47.96:0,48,512	0/0:21,1:22:22.04:0,22,458	0/1:17,0:16:8.37:8,0,24	1/1:9,0:8:6.22:15,6,0	0/1:16,0:15:10.05:15,0,10	0/0:6,0:6:0.84:0,1,13	0/0:18,0:18:42.07:0,42,439	0/0:23,0:23:66.06:0,66,675	0/0:15,0:15:36.09:0,36,391	1/1:9,0:8:10.88:26,11,0	0/1:16,0:16:3.49:13,0,3	0/1:13,0:12:4.78:15,0,5	1/1:14,0:12:4.54:30,5,0	0/1:25,0:22:2.45:31,0,2	1/1:10,0:10:1.84:8,2,0	1/1:8,0:5:4.66:11,5,0	0/0:17,0:17:36.07:0,36,386	0/0:30,0:29:75.20:0,75,824	0/0:33,1:34:64.17:0,64,921	0/1:7,0:8:1.88:2,0,34	0/1:14,0:12:6.10:6,0,24	1/1:21,0:20:12.42:32,12,0	1/1:4,0:4:6.22:15,6,0
chr10	57290683	.	AAAAC	A	2103.97	PASS	AB=1.000;AC=28;AF=0.500;AN=56;BaseQRankSum=14.020;DP=479;FS=57.259;HRun=0;HaplotypeScore=121.1630;InbreedingCoeff=0.6717;MQ=47.66;MQ0=10;MQRankSum=-12.709;QD=9.79;ReadPosRankSum=-2.137;VQSLOD=0.3329;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:93.10:0,93,1151	1/1:4,0:4:7.58:48,8,0	0/0:13,0:1:3.01:0,3,50	0/0:15,0:4:2.82:0,3,103	0/0:30,0:30:81.04:0,81,957	0/0:17,0:16:48.16:0,48,1114	0/0:18,0:18:48.12:0,48,1019	1/1:24,1:23:28.67:221,29,0	1/1:7,0:6:14.35:75,14,0	1/1:13,2:14:34.86:261,35,0	1/1:6,0:6:9.30:55,9,0	0/0:19,0:19:54.13:0,54,1120	0/0:23,0:23:66.20:0,66,1505	0/0:13,0:13:36.10:0,36,792	1/1:14,1:14:32.26:224,32,0	0/1:14,0:13:1.80:130,0,2	1/1:14,0:13:2.87:77,3,0	0/1:13,0:10:15.38:44,0,15	1/1:27,4:27:67.87:512,68,0	0/1:8,0:8:2.61:75,0,3	1/1:10,0:6:14.07:79,14,0	0/0:15,0:15:42.10:0,42,895	0/0:30,0:29:84.06:0,84,1675	0/0:36,0:36:90.11:0,90,2199	1/1:10,0:10:17.32:94,17,0	0/1:17,0:14:12.20:103,0,12	1/1:21,1:22:33.80:247,34,0	1/1:4,0:4:11.61:63,12,0
chr10	57290684	.	AAAC	A	4872.15	PASS	AB=0.808;AC=32;AF=0.571;AN=56;BaseQRankSum=13.526;DP=493;FS=45.087;HRun=0;HaplotypeScore=106.4461;InbreedingCoeff=0.8485;MQ=47.48;MQ0=9;MQRankSum=-13.767;QD=20.22;ReadPosRankSum=-3.249;VQSLOD=2.1669;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:95.58:0,96,806	1/1:4,0:4:11.28:62,11,0	0/0:13,0:1:3.01:0,3,39	0/1:17,0:5:3.88:4,0,103	0/0:30,0:30:80.67:0,81,682	0/0:17,0:16:48.16:0,48,951	0/0:19,0:19:51.10:0,51,888	1/1:21,8:27:52.30:494,52,0	1/1:1,6:6:14.79:196,15,0	1/1:8,7:14:38.99:478,39,0	1/1:2,4:6:11.92:108,12,0	0/0:19,0:19:54.12:0,54,956	0/0:23,0:23:66.19:0,66,1292	0/0:14,0:14:39.09:0,39,709	1/1:8,7:14:38.84:424,39,0	1/1:15,0:14:20.11:215,20,0	1/1:15,0:14:23.65:145,24,0	1/1:13,0:10:15.30:120,15,0	1/1:16,15:28:77.35:907,77,0	0/1:3,5:8:1.43:225,0,1	1/1:5,4:6:14.47:165,14,0	0/0:15,0:15:42.09:0,42,756	0/0:31,0:30:87.23:0,87,1490	0/0:35,0:35:86.90:0,87,1849	1/1:7,4:11:20.98:266,21,0	1/1:9,8:14:7.65:348,8,0	1/1:17,8:25:41.05:531,41,0	1/1:1,3:4:12.04:185,12,0
chr10	57290686	.	AC	A	2961.65	PASS	AB=1.000;AC=34;AF=0.607;AN=56;BaseQRankSum=15.663;DP=482;FS=30.363;HRun=1;HaplotypeScore=95.3484;InbreedingCoeff=0.7866;MQ=47.61;MQ0=8;MQRankSum=-10.634;QD=10.47;ReadPosRankSum=-0.712;VQSLOD=-0.0690;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:36,0:36:20.10:20,0,86	1/1:4,0:4:11.83:77,12,0	0/0:12,0:1:2.99:0,3,23	0/0:16,1:5:6.18:0,6,70	0/1:29,0:29:51.27:51,0,116	0/0:19,0:18:54.01:0,54,632	0/0:17,0:17:47.54:0,48,575	1/1:24,0:22:52.41:339,52,0	1/1:7,0:6:14.51:86,15,0	1/1:14,0:13:38.13:232,38,0	1/1:6,0:6:9.75:59,10,0	0/0:19,0:19:54.07:0,54,600	0/0:22,0:22:66.20:0,66,806	0/0:13,0:13:39.10:0,39,463	1/1:15,0:14:38.36:246,38,0	1/1:10,6:15:38.16:288,38,0	1/1:11,4:14:28.05:197,28,0	1/1:7,6:10:24.89:214,25,0	1/1:30,0:27:75.82:472,76,0	1/1:7,1:8:18.10:110,18,0	1/1:9,0:6:13.86:81,14,0	0/0:15,0:15:41.09:0,41,470	0/0:30,0:30:86.99:0,87,969	0/0:34,0:34:79.33:0,79,1129	1/1:10,0:10:20.61:128,21,0	1/1:17,0:14:30.03:218,30,0	1/1:25,1:26:43.81:284,44,0	1/1:3,1:4:11.78:74,12,0
chr10	57290690	.	AAC	A	581.09	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=6.789;DP=509;FS=3.472;HRun=0;HaplotypeScore=121.6975;InbreedingCoeff=0.5223;MQ=49.63;MQ0=7;MQRankSum=-6.757;QD=7.09;ReadPosRankSum=-3.246;VQSLOD=2.9053;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,99,1709	0/1:4,0:4:5.16:5,0,39	0/0:17,0:6:2.52:0,3,131	0/1:17,0:5:2.69:3,0,154	0/0:32,0:32:92.89:0,93,1487	0/0:19,0:18:54.18:0,54,952	0/0:17,0:17:48.14:0,48,831	0/0:23,0:21:15.66:0,16,160	0/0:10,0:9:2.46:0,2,28	0/0:15,0:14:28.39:0,28,161	0/0:9,0:9:12.82:0,13,60	0/0:21,0:21:62.98:0,63,1017	0/0:22,0:22:66.23:0,66,1162	0/0:13,0:13:36.12:0,36,630	0/0:15,0:14:36.14:0,36,179	1/1:14,1:16:39.63:311,40,0	1/1:20,1:19:28.77:212,29,0	1/1:12,1:10:25.92:189,26,0	0/0:31,0:28:71.48:0,71,361	0/0:10,1:11:7.40:0,7,61	0/1:10,0:7:6.66:7,0,37	0/0:15,0:15:42.12:0,42,704	0/0:28,0:28:78.21:0,78,1305	0/0:34,0:34:85.11:0,85,1672	0/0:9,0:9:12.30:0,12,74	0/0:17,0:14:31.07:0,31,210	0/0:27,0:27:7.08:0,7,143	0/0:5,0:5:0.33:0,0,19
chr10	57290697	.	AC	A	288.47	PASS	AB=0.902;AC=9;AF=0.161;AN=56;BaseQRankSum=6.894;DP=514;FS=2.021;HRun=1;HaplotypeScore=117.5007;InbreedingCoeff=0.5717;MQ=54.36;MQ0=6;MQRankSum=-5.732;QD=3.70;ReadPosRankSum=-2.724;VQSLOD=-0.7409;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,109,1427	0/0:5,0:5:14.69:0,15,114	0/0:19,1:11:22.35:0,22,251	0/0:22,0:10:1.52:0,2,120	0/0:32,0:32:93.28:0,93,1253	0/0:18,0:17:51.16:0,51,694	0/0:17,0:17:48.16:0,48,670	0/0:26,0:24:29.25:0,29,601	0/1:8,1:9:8.33:8,0,140	0/0:13,0:12:35.47:0,35,431	0/0:7,0:7:9.61:0,10,83	0/0:21,0:21:63.18:0,63,841	0/0:22,0:22:66.19:0,66,866	0/0:11,0:11:33.10:0,33,443	0/0:17,0:16:16.33:0,16,411	1/1:16,0:15:22.55:201,23,0	1/1:21,0:19:10.52:104,11,0	1/1:12,1:11:13.95:101,14,0	0/0:34,0:30:77.82:0,78,831	0/1:10,1:11:17.52:18,0,139	0/1:7,1:7:1.49:1,0,111	0/0:14,0:14:41.71:0,42,536	0/0:27,0:27:75.19:0,75,985	0/0:35,0:35:96.25:0,96,1354	0/0:9,0:9:17.85:0,18,188	0/0:17,0:14:39.56:0,40,359	0/0:23,1:23:23.69:0,24,414	0/0:4,1:5:11.40:0,11,127
chr10	57290701	.	A	AC	1760.89	PASS	AB=0.855;AC=17;AF=0.304;AN=56;BaseQRankSum=11.338;DP=540;FS=6.754;HRun=0;HaplotypeScore=122.3629;InbreedingCoeff=0.0353;MQ=56.00;MQ0=6;MQRankSum=-9.434;QD=7.97;ReadPosRankSum=-1.799;VQSLOD=3.1445;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,109,1459	0/1:1,4:5:25.31:139,0,25	0/0:22,0:15:32.54:0,33,394	0/0:23,0:11:14.42:0,14,169	0/0:31,0:31:89.51:0,90,1221	0/0:17,0:16:48.16:0,48,671	0/0:18,0:18:54.13:0,54,718	0/0:29,1:28:8.07:0,8,589	0/1:10,0:10:4.46:4,0,142	0/1:13,2:14:32.44:32,0,321	0/1:5,3:8:26.08:110,0,26	0/0:22,0:22:66.21:0,66,907	0/0:20,0:20:60.19:0,60,824	0/0:11,0:11:33.10:0,33,446	0/1:15,3:18:87.84:88,0,294	1/1:7,9:17:24.89:377,25,0	1/1:11,8:20:34.51:466,35,0	1/1:8,7:12:2.90:217,3,0	0/1:33,3:32:99:138,0,602	0/1:9,3:12:99:156,0,126	0/1:6,1:6:29.39:29,0,119	0/0:16,0:16:32.60:0,33,560	0/0:25,0:25:69.23:0,69,965	0/0:35,0:35:99:0,102,1409	0/1:9,1:10:19.65:20,0,97	0/1:17,2:16:99:127,0,205	0/1:24,1:24:27.62:28,0,280	0/0:6,0:6:14.78:0,15,178
chr10	57290718	.	A	AC	647.91	PASS	AB=0.892;AC=8;AF=0.143;AN=56;BaseQRankSum=8.609;DP=545;FS=4.619;HRun=0;HaplotypeScore=127.4607;InbreedingCoeff=-0.1806;MQ=61.88;MQ0=2;MQRankSum=-7.393;QD=6.11;ReadPosRankSum=1.247;VQSLOD=3.2486;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:90.30:0,90,1257	0/0:5,0:5:10.63:0,11,120	0/0:28,0:22:53.88:0,54,624	0/0:21,0:13:22.81:0,23,251	0/0:34,0:34:99:0,99,1350	0/0:17,0:17:48.14:0,48,626	0/0:20,0:20:60.20:0,60,838	0/0:33,0:30:76.20:0,76,836	0/1:11,0:11:7.05:7,0,109	0/1:11,3:14:99:132,0,222	0/1:5,4:9:43.27:131,0,43	0/0:24,0:24:69.01:0,69,918	0/0:17,0:17:51.16:0,51,694	0/0:10,0:10:30.10:0,30,419	0/1:15,3:18:99:152,0,190	0/0:19,0:18:45.11:0,45,571	0/0:22,0:20:51.03:0,51,623	0/0:18,0:16:36.11:0,36,476	0/0:24,1:24:12.73:0,13,467	0/1:12,3:15:87.87:236,0,88	0/0:6,0:6:7.82:0,8,72	0/0:20,0:20:57.18:0,57,781	0/0:25,0:25:72.23:0,72,987	0/0:34,0:34:96.32:0,96,1342	0/1:12,1:13:26.22:26,0,48	0/1:20,0:18:80.67:81,0,158	0/0:27,0:26:0.40:0,0,233	0/1:6,0:6:16.54:17,0,141
chr10	57290721	.	ACAG	A	1631.55	PASS	AB=0.924;AC=16;AF=0.286;AN=56;BaseQRankSum=7.971;DP=550;FS=0.000;HRun=0;HaplotypeScore=139.6196;InbreedingCoeff=-0.0295;MQ=65.56;MQ0=2;MQRankSum=-6.908;QD=7.28;ReadPosRankSum=-1.991;VQSLOD=2.4419;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:90.29:0,90,1860	0/1:4,0:5:3.57:16,0,4	0/0:32,0:26:52.15:0,52,1003	0/1:19,0:13:16.33:16,0,290	0/0:34,0:34:99:0,99,1987	0/0:15,0:15:45.15:0,45,932	0/0:20,0:20:60.21:0,60,1228	0/1:27,1:28:99:103,0,349	0/1:10,1:11:49.99:50,0,62	0/1:13,2:15:99:249,0,150	1/1:10,1:11:17.70:281,18,0	0/0:23,0:23:69.24:0,69,1419	0/0:17,0:17:51.16:0,51,1016	0/0:11,0:11:33.11:0,33,684	0/1:19,1:20:72.53:353,0,73	0/1:23,0:22:8.53:9,0,832	0/0:19,0:17:34.84:0,35,726	0/0:16,1:16:41.81:0,42,742	0/0:24,0:23:11.72:0,12,284	1/1:7,7:15:6.23:362,6,0	0/1:5,0:4:15.43:19,0,15	0/0:21,0:21:60.21:0,60,1214	0/0:26,0:26:75.24:0,75,1473	0/0:35,0:35:99:0,102,2112	0/1:11,1:13:28.01:31,0,28	0/1:21,1:20:61.19:145,0,61	0/1:26,2:27:99:120,0,161	0/1:5,1:6:42.31:42,0,49
chr10	57290722	.	C	CAAACAAAA	7842.94	PASS	AB=0.944;AC=25;AF=0.446;AN=56;BaseQRankSum=11.228;DP=561;FS=17.600;HRun=0;HaplotypeScore=175.7438;InbreedingCoeff=0.7642;MQ=66.36;MQ0=2;MQRankSum=-12.319;QD=32.95;ReadPosRankSum=-0.536;VQSLOD=3.0313;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:87.30:0,87,2484	1/1:5,0:5:12.93:288,13,0	0/0:33,0:27:65.77:0,66,1068	0/0:19,0:13:14.14:0,14,393	0/0:36,0:36:96.33:0,96,2523	0/0:15,0:15:45.13:0,45,1119	0/0:20,0:20:60.18:0,60,1495	0/1:33,0:30:28.93:29,0,198	1/1:4,5:12:14.12:258,14,0	1/1:14,0:15:44.33:871,44,0	1/1:12,0:12:27.94:704,28,0	0/0:23,0:23:69.22:0,69,1818	0/0:17,0:17:48.16:0,48,1234	0/0:11,0:11:33.10:0,33,856	1/1:18,2:20:56.20:1135,56,0	0/1:23,0:22:9.95:10,0,390	0/0:19,0:17:12.88:0,13,233	0/0:18,0:17:30.15:0,30,452	1/1:20,0:22:54.51:1039,55,0	1/1:15,0:15:33.87:856,34,0	0/1:4,1:4:41.58:75,0,42	0/0:21,0:21:60.19:0,60,1490	0/0:25,0:25:72.20:0,72,1702	0/0:35,0:35:99:0,102,2696	1/1:4,8:12:14.98:455,15,0	1/1:11,10:23:57.15:1253,57,0	1/1:12,7:30:39.52:715,40,0	1/1:7,0:7:7.76:155,8,0
chr10	57291373	.	CTTTT	C	7972.07	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=9.798;DP=572;FS=15.271;HRun=14;HaplotypeScore=126.3522;InbreedingCoeff=0.9517;MQ=60.62;MQ0=6;MQRankSum=-2.850;QD=23.45;ReadPosRankSum=4.334;VQSLOD=2.0889;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:42:87.07:0,87,992	1/1:0,7:7:15.03:212,15,0	0/0:24,0:14:21.01:0,21,290	0/0:14,0:11:6.02:0,6,128	0/0:9,0:29:72.23:0,72,1006	0/0:27,0:27:66.19:0,66,1308	0/0:6,0:6:12.04:0,12,282	1/1:7,20:28:36.33:652,36,0	1/1:4,14:18:36.08:509,36,0	1/1:6,20:26:57.09:745,57,0	1/1:3,17:20:48.09:669,48,0	0/0:20,0:20:51.14:0,51,1069	0/0:19,0:20:54.12:0,54,1085	0/0:13,0:13:33.07:0,33,686	1/1:3,15:17:36.05:509,36,0	1/1:0,1:30:18.97:99,19,0	1/1:5,0:21:4.18:25,4,0	1/1:0,0:17:16.20:40,16,0	1/1:4,10:12:20.92:296,21,0	1/1:7,17:24:26.22:548,26,0	1/1:3,7:10:15.87:290,16,0	0/0:10,0:10:18.06:0,18,424	0/0:10,0:12:30.03:0,30,582	0/0:11,0:13:33.10:0,33,659	1/1:4,23:29:69.10:938,69,0	1/1:3,21:23:57.12:780,57,0	1/1:5,33:39:83.82:1148,84,0	1/1:2,12:14:36.11:510,36,0
chr10	57291681	.	TTGTGTG	T	905.28	PASS	AB=0.882;AC=9;AF=0.161;AN=56;BaseQRankSum=5.319;DP=654;FS=13.383;HRun=0;HaplotypeScore=138.6104;InbreedingCoeff=0.6891;MQ=64.78;MQ0=13;MQRankSum=-1.081;QD=7.24;ReadPosRankSum=1.245;VQSLOD=1.9530;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:22,1:28:1.77:3,2,0	0/0:6,0:6:6.02:0,6,127	0/0:26,0:17:0:0,0,0	0/0:30,0:25:0.47:0,0,1	0/1:26,4:29:61.11:61,0,144	0/0:23,0:22:30.08:0,30,538	0/0:24,0:25:14.67:0,15,373	0/0:21,0:20:15.52:0,16,283	0/0:18,0:18:27.08:0,27,661	0/0:16,0:14:17.21:0,17,438	0/0:17,0:16:17.03:0,17,321	0/0:18,0:19:24.05:0,24,389	0/0:10,0:11:9.03:0,9,124	0/0:18,0:17:12.04:0,12,264	0/0:26,0:27:39.13:0,39,867	1/1:15,10:28:26.86:394,27,0	1/1:21,4:26:24.02:384,24,0	1/1:12,1:12:12.04:207,12,0	0/0:20,0:17:9.03:0,9,211	0/0:20,0:20:15.05:0,15,323	0/0:44,0:50:77.83:0,78,1654	0/0:22,0:24:32.24:0,32,771	0/0:18,0:18:27.07:0,27,587	0/0:36,0:36:45.15:0,45,1088	0/0:27,0:27:33.10:0,33,696	0/0:25,0:24:18.06:0,18,452	0/0:27,0:27:24.08:0,24,600	0/0:16,0:18:41.28:0,41,855
chr10	57291829	.	A	AG	1523.37	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-4.828;DP=679;FS=30.805;HRun=2;HaplotypeScore=89.6707;InbreedingCoeff=0.9735;MQ=69.74;MQ0=0;MQRankSum=0.682;QD=39.06;ReadPosRankSum=-5.275;VQSLOD=0.1841;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,138,1710	1/1:1,4:5:12.04:173,12,0	0/0:23,0:22:61.93:0,62,668	0/0:20,0:20:45.12:0,45,578	0/0:17,0:17:42.12:0,42,508	0/0:28,0:28:81.25:0,81,1004	0/0:23,0:23:63.20:0,63,781	1/1:0,34:34:99:1467,102,0	0/0:16,0:16:45.14:0,45,558	0/0:20,0:20:60.18:0,60,731	0/0:21,0:21:54.16:0,54,657	0/0:31,0:31:93.29:0,93,1153	0/0:22,0:22:66.19:0,66,805	0/0:29,0:29:87.23:0,87,1048	0/0:33,0:33:90.27:0,90,1103	0/0:37,0:37:99:0,108,1339	0/0:44,0:44:99:0,120,1471	0/0:21,0:21:57.18:0,57,707	0/0:22,0:22:66.21:0,66,818	0/0:24,0:24:63.20:0,63,781	0/0:41,0:41:99:0,114,1399	0/0:8,0:8:15.05:0,15,186	0/0:17,0:17:51.13:0,51,607	0/0:36,0:36:99:0,102,1252	0/0:10,0:10:30.09:0,30,372	0/0:23,0:23:69.21:0,69,845	0/0:18,0:18:54.14:0,54,654	0/0:7,0:7:21.03:0,21,233
chr10	57292318	.	A	AAAAT	11697.33	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-3.958;DP=623;FS=14.096;HRun=0;HaplotypeScore=99.4341;InbreedingCoeff=0.9909;MQ=75.59;MQ0=0;MQRankSum=-6.408;QD=49.78;ReadPosRankSum=-1.924;VQSLOD=4.7008;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:60.21:0,60,1025	1/1:3,3:6:9.03:227,9,0	0/0:27,0:27:48.16:0,48,778	0/0:19,0:19:33.11:0,33,498	0/0:26,0:26:63.22:0,63,1084	0/0:13,0:13:33.11:0,33,565	0/0:22,0:22:54.18:0,54,918	1/1:16,18:38:81.22:1671,81,0	1/1:4,15:21:45.15:1138,45,0	1/1:5,16:22:51.16:1201,51,0	1/1:4,12:16:36.12:887,36,0	0/0:39,0:39:90.31:0,90,1548	0/0:25,0:25:60.19:0,60,1010	0/0:30,0:30:81.28:0,81,1396	1/1:6,10:18:30.10:759,30,0	0/0:32,0:32:72.25:0,72,1244	0/0:26,0:26:72.23:0,72,1206	0/0:29,0:29:78.27:0,78,1348	1/1:6,11:17:39.07:819,39,0	1/1:2,10:15:33.11:809,33,0	1/1:4,17:22:52.42:1211,52,0	0/0:23,0:23:57.20:0,57,985	0/0:21,0:21:54.18:0,54,908	0/0:32,0:32:72.20:0,72,1201	1/1:1,17:18:45.15:1137,45,0	1/1:7,11:18:33.09:702,33,0	1/1:4,10:15:21.07:531,21,0	1/1:0,8:9:24.08:606,24,0
chr10	57292471	.	GA	G	2240.61	PASS	AB=0.687;AC=24;AF=0.429;AN=56;BaseQRankSum=1.843;DP=482;FS=17.115;HRun=13;HaplotypeScore=104.9203;InbreedingCoeff=0.3784;MQ=69.98;MQ0=3;MQRankSum=0.041;QD=8.79;ReadPosRankSum=4.467;VQSLOD=1.1034;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,3:22:20.16:0,20,358	0/1:4,2:6:1.48:38,0,1	0/0:33,0:19:31:0,31,241	0/0:34,0:18:15.35:0,15,137	0/0:28,0:30:59.07:0,59,581	0/0:13,0:13:5.12:0,5,207	0/0:12,0:12:24.04:0,24,233	0/1:14,14:28:37.68:219,0,38	1/1:4,4:9:10.90:71,11,0	1/1:8,6:14:17.73:131,18,0	1/1:6,8:15:0.16:147,0,0	0/0:15,3:18:33.05:0,33,321	0/0:17,1:18:17.14:0,17,320	0/0:14,1:15:14.15:0,14,299	1/1:5,6:11:10:121,10,0	0/1:6,19:26:3.57:285,0,4	0/1:5,22:28:13.88:392,0,14	1/1:5,20:28:53.82:368,54,0	1/1:10,4:14:3.78:96,4,0	0/1:8,4:12:6.72:89,0,7	1/1:2,5:7:11.93:87,12,0	0/0:7,0:7:18.03:0,18,175	0/0:19,0:19:48.07:0,48,463	0/0:5,0:5:12.02:0,12,117	0/1:13,5:19:62.79:97,0,63	0/1:11,5:16:28.82:96,0,29	1/1:4,7:11:12.64:142,13,0	0/1:5,4:9:23.92:49,0,24
chr10	57293380	.	A	ATT	9082.45	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=6.657;DP=586;FS=2.117;HRun=9;HaplotypeScore=93.9266;InbreedingCoeff=0.9640;MQ=58.11;MQ0=5;MQRankSum=-6.544;QD=23.05;ReadPosRankSum=-1.676;VQSLOD=4.1647;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,0:28:42.89:157,43,0	1/1:2,3:7:18.01:216,18,0	0/0:16,0:11:23.84:0,24,217	0/0:9,0:5:5.28:0,5,49	1/1:2,0:27:53.71:183,54,0	0/0:26,0:26:60.12:0,60,635	0/0:20,0:20:21:0,21,472	1/1:17,4:21:32.89:400,33,0	1/1:6,10:15:27.09:407,27,0	1/1:14,6:21:45.07:621,45,0	1/1:10,6:16:36.08:507,36,0	0/0:24,0:24:57.10:0,57,607	0/0:18,0:18:48.07:0,48,498	0/0:17,0:17:39.04:0,39,405	1/1:13,16:28:69.23:1041,69,0	1/1:2,0:17:32.44:111,32,0	1/1:7,0:24:40.43:154,40,0	1/1:6,0:16:29.67:102,30,0	1/1:12,14:27:60.01:745,60,0	1/1:8,18:24:54.16:782,54,0	1/1:5,2:7:5.99:92,6,0	0/0:19,0:19:51.10:0,51,543	0/0:13,0:13:35.82:0,36,363	0/0:30,0:30:84.21:0,84,893	1/1:17,16:33:75.24:1107,75,0	1/1:15,12:27:69.17:997,69,0	1/1:12,7:19:42.10:594,42,0	1/1:22,8:29:62.52:866,63,0
chr10	57294647	.	G	GT	12494.68	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-16.886;DP=698;FS=4.161;HRun=3;HaplotypeScore=63.7822;InbreedingCoeff=0.9988;MQ=86.26;MQ0=0;MQRankSum=-2.746;QD=38.68;ReadPosRankSum=1.488;VQSLOD=5.2962;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,108,1281	1/1:4,6:10:18.06:252,18,0	0/0:26,0:26:55.61:0,56,787	0/0:27,0:27:72.04:0,72,830	0/0:18,0:18:51.16:0,51,611	0/0:20,0:20:57.17:0,57,684	0/0:20,0:20:42.13:0,42,504	1/1:4,31:35:93.31:1300,93,0	1/1:1,25:26:72.24:1008,72,0	1/1:0,16:16:48.15:656,48,0	1/1:1,23:24:66.22:924,66,0	0/0:33,0:33:96.28:0,96,1140	0/0:24,0:24:66.20:0,66,791	0/0:28,0:28:81.25:0,81,972	1/1:0,40:41:99:1721,123,0	0/0:35,0:35:96.28:0,96,1140	0/0:21,0:21:60.18:0,60,720	0/0:16,0:16:45.12:0,45,527	1/1:2,17:19:48.16:672,48,0	1/1:0,21:21:60.20:840,60,0	1/1:2,48:50:99:1974,141,0	0/0:25,0:25:66.17:0,66,768	0/0:14,0:14:33.10:0,33,396	0/0:30,0:30:84.26:0,84,1008	1/1:0,19:19:51.17:714,51,0	1/1:0,23:23:69.23:966,69,0	1/1:4,19:23:60.20:836,60,0	1/1:0,16:16:45.15:630,45,0
chr10	57295607	.	G	GTCTCTC	4018.42	PASS	AB=0.770;AC=22;AF=0.393;AN=56;BaseQRankSum=6.743;DP=747;FS=7.244;HRun=0;HaplotypeScore=175.5857;InbreedingCoeff=0.7231;MQ=59.72;MQ0=7;MQRankSum=-2.305;QD=13.67;ReadPosRankSum=-2.261;VQSLOD=2.0942;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:93.19:0,93,1838	0/0:8,0:9:11.26:0,11,311	0/0:37,0:16:10.05:0,10,369	0/0:72,0:24:24.16:0,24,303	0/0:31,0:31:84.11:0,84,1730	0/0:22,0:22:66.14:0,66,1293	0/0:25,0:25:66.02:0,66,1153	0/1:43,0:42:59.14:59,0,665	0/1:3,14:20:23.04:385,0,23	1/1:6,13:25:47.86:861,48,0	1/1:5,15:24:8.96:124,9,0	0/0:30,0:30:87.24:0,87,1914	0/0:20,0:20:57.12:0,57,1204	0/0:17,0:17:51.15:0,51,1042	1/1:2,14:17:5.76:139,6,0	0/0:25,0:25:39.12:0,39,681	0/0:31,0:31:20.95:0,21,292	0/0:17,0:17:35.87:0,36,691	1/1:10,7:22:38.89:613,39,0	1/1:6,18:31:2.12:256,2,0	1/1:4,25:30:0.46:1,0,0	0/0:26,0:26:72.08:0,72,1377	0/0:26,0:26:62.67:0,63,1214	0/0:24,0:24:63.11:0,63,1303	1/1:0,9:15:3.01:53,3,0	1/1:5,14:25:62.69:921,63,0	1/1:3,25:32:20.96:478,21,0	1/1:9,0:9:15.43:127,15,0
chr10	57295611	.	GTCTCTC	G	1180.18	PASS	AB=0.842;AC=5;AF=0.089;AN=56;BaseQRankSum=1.402;DP=723;FS=2.600;HRun=0;HaplotypeScore=167.8724;InbreedingCoeff=0.6259;MQ=58.06;MQ0=8;MQRankSum=-4.853;QD=16.62;ReadPosRankSum=1.695;VQSLOD=2.9339;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:40:86.96:0,87,2446	0/0:9,0:9:27.09:0,27,798	0/0:37,0:14:6.40:0,6,68	0/0:69,0:20:11.30:0,11,77	0/0:30,0:30:72.15:0,72,1703	0/0:23,0:23:63.09:0,63,1531	0/0:23,0:25:51.13:0,51,1111	0/0:46,0:45:99:0,108,1557	0/0:20,0:20:21.04:0,21,463	0/0:23,0:23:63.01:0,63,951	0/0:21,0:21:9.07:0,9,178	0/0:30,0:31:75.08:0,75,2164	0/0:21,0:22:51.06:0,51,1676	0/0:17,0:17:45.14:0,45,1328	0/0:15,0:15:17.55:0,18,134	1/1:4,22:26:27.09:583,27,0	1/1:5,24:29:8.56:185,9,0	0/1:13,3:16:11.91:533,0,12	0/0:17,0:17:47.22:0,47,662	0/0:26,0:26:29.30:0,29,343	0/0:30,0:30:0.47:0,0,1	0/0:25,0:26:57.14:0,57,1540	0/0:23,0:24:53.28:0,53,1345	0/0:25,0:25:51.62:0,52,1538	0/0:13,0:13:5.95:0,6,98	0/0:24,0:23:61.13:0,61,803	0/0:30,0:30:32.10:0,32,467	0/0:9,0:9:5.29:0,5,93
chr10	57298629	.	T	TA	325.50	PASS	AB=0.917;AC=5;AF=0.089;AN=56;BaseQRankSum=-1.038;DP=611;FS=16.894;HRun=10;HaplotypeScore=61.4353;InbreedingCoeff=0.6405;MQ=59.81;MQ0=2;MQRankSum=-1.258;QD=8.57;ReadPosRankSum=-3.156;VQSLOD=-0.0452;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,135,1094	1/1:1,4:5:15.04:158,15,0	0/1:9,1:10:16.39:52,0,16	0/0:9,0:5:2.97:0,3,21	0/0:16,1:17:9.94:0,10,288	0/0:15,1:16:0.98:0,1,214	0/0:23,0:26:60.03:0,60,461	1/1:8,14:16:24.04:242,24,0	0/0:22,0:22:56.92:0,57,468	0/0:22,1:23:29.98:0,30,442	0/0:21,0:21:50.91:0,51,419	0/0:24,0:25:58.94:0,59,474	0/0:10,0:10:20.95:0,21,172	0/0:17,0:17:41.92:0,42,345	0/0:32,0:33:82.91:0,83,667	0/0:25,0:25:62.87:0,63,511	0/0:35,0:35:83.85:0,84,689	0/0:21,0:21:59.93:0,60,493	0/0:16,0:16:38.83:0,39,304	0/0:16,0:17:43.97:0,44,348	0/0:31,0:33:69.92:0,70,549	0/0:20,0:19:47.94:0,48,394	0/0:15,0:16:34.98:0,35,277	0/0:35,0:35:98.88:0,99,813	0/0:22,0:22:49.96:0,50,400	0/0:23,0:23:53.93:0,54,443	0/0:19,0:19:30.28:0,30,373	0/0:17,0:17:47.94:0,48,394
chr10	57298856	.	T	TG	6446.93	PASS	AC=34;AF=0.630;AN=54;BaseQRankSum=-8.057;DP=423;FS=4.205;HRun=6;HaplotypeScore=64.4894;InbreedingCoeff=0.9533;MQ=73.12;MQ0=3;MQRankSum=-4.312;QD=31.14;ReadPosRankSum=1.428;VQSLOD=5.5821;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,22:28:69.18:845,69,0	1/1:0,2:2:6.02:75,6,0	0/0:22,0:17:35.25:0,35,328	0/0:40,0:32:69.51:0,70,640	1/1:0,12:12:33.10:413,33,0	0/0:17,0:17:45.10:0,45,459	0/0:22,0:22:57.11:0,57,575	1/1:4,17:21:48.15:600,48,0	1/1:0,7:7:18.06:226,18,0	1/1:1,5:6:15.05:189,15,0	1/1:0,10:10:27.09:338,27,0	0/0:21,0:21:51.10:0,51,513	0/0:12,0:12:30.06:0,30,306	0/0:9,0:9:24.05:0,24,245	./.	1/1:1,23:24:72.22:894,72,0	1/1:5,18:23:57.11:682,57,0	1/1:4,6:10:21.07:264,21,0	1/1:2,2:4:9.03:111,9,0	1/1:3,10:13:30.10:377,30,0	1/1:1,9:10:18.53:227,19,0	0/0:21,0:21:51.10:0,51,514	0/0:19,0:19:48.11:0,48,490	0/0:32,0:32:68.59:0,69,703	1/1:2,8:9:24.08:302,24,0	1/1:1,15:16:42.13:526,42,0	1/1:1,8:9:24.08:302,24,0	1/1:0,2:2:6.02:75,6,0
chr10	57299048	.	A	AC	309.19	PASS	AB=0.967;AC=11;AF=0.196;AN=56;BaseQRankSum=7.021;DP=477;FS=6.286;HRun=0;HaplotypeScore=62.8980;InbreedingCoeff=-0.2418;MQ=65.70;MQ0=7;MQRankSum=0.269;QD=2.01;ReadPosRankSum=-0.485;VQSLOD=1.0030;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:46.41:0,46,364	0/0:4,0:4:11.88:0,12,85	0/0:46,0:17:41.19:0,41,292	0/0:24,0:11:11.69:0,12,88	0/0:20,0:19:50.16:0,50,393	0/0:17,0:17:50.30:0,50,431	0/0:19,0:19:56.84:0,57,468	0/0:28,0:26:46.16:0,46,338	0/1:19,0:19:76.94:77,0,140	0/1:21,0:20:53.89:54,0,203	0/1:7,0:7:49.07:49,0,51	0/0:23,0:23:53.73:0,54,438	0/0:14,0:14:38.81:0,39,309	0/0:13,0:13:35.87:0,36,295	0/1:5,7:12:12.09:12,0,73	0/0:18,0:17:32.55:0,33,225	0/0:18,0:18:47.66:0,48,359	0/0:11,0:11:29.79:0,30,229	0/1:22,0:22:92.44:92,0,182	0/1:13,0:13:33.11:33,0,129	0/1:5,0:5:12.65:13,0,26	0/0:4,0:4:12.02:0,12,122	0/0:13,0:13:35.08:0,35,276	0/0:25,0:23:53.86:0,54,475	0/1:10,0:9:53.96:54,0,55	0/1:24,0:24:44.16:44,0,292	0/1:17,0:16:19.05:19,0,143	0/1:4,0:4:7.74:8,0,42
chr10	57299054	.	A	AC	1317.79	PASS	AB=0.970;AC=15;AF=0.268;AN=56;BaseQRankSum=5.952;DP=488;FS=0.000;HRun=0;HaplotypeScore=66.5563;InbreedingCoeff=-0.1981;MQ=63.04;MQ0=7;MQRankSum=3.380;QD=5.11;ReadPosRankSum=0.306;VQSLOD=2.8846;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:55.11:0,55,403	1/1:5,0:5:8.93:63,9,0	0/1:38,0:14:56.18:56,0,170	0/0:21,0:11:23.28:0,23,174	0/0:19,0:18:28.12:0,28,193	0/0:14,0:14:39.11:0,39,311	0/0:18,0:18:48.27:0,48,366	0/1:11,18:29:27.05:309,0,27	0/1:21,0:21:99:104,0,118	0/1:21,0:20:86.10:86,0,147	0/1:13,0:13:17.98:144,0,18	0/0:25,0:25:43.97:0,44,344	0/0:14,0:14:26.70:0,27,193	0/0:12,0:12:25.25:0,25,201	0/1:14,0:14:53.06:53,0,56	0/0:15,0:14:26.78:0,27,173	0/0:13,0:13:30.03:0,30,211	0/0:8,0:8:20.47:0,20,143	0/1:25,0:24:99:148,0,118	0/1:16,0:16:60.65:108,0,61	0/1:8,0:8:15.38:54,0,15	0/0:4,0:4:9.01:0,9,91	0/0:14,0:14:26.48:0,26,182	0/0:26,0:24:56.69:0,57,465	0/1:11,0:10:42.01:50,0,42	0/1:28,0:28:99:133,0,222	0/1:23,0:22:99:140,0,121	0/1:5,0:5:22.81:31,0,23
chr10	57299973	.	C	CCGACTTGGA	18797.17	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-9.747;DP=641;FS=1.185;HRun=0;HaplotypeScore=177.4336;InbreedingCoeff=0.9973;MQ=88.05;MQ0=0;MQRankSum=-16.281;QD=71.74;ReadPosRankSum=-2.962;VQSLOD=4.1569;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:87.26:0,87,2371	1/1:5,6:11:21.07:938,21,0	0/0:24,0:24:51.13:0,51,1277	0/0:31,0:31:66.21:0,66,1759	0/0:25,0:25:63.16:0,63,1457	0/0:16,0:16:39.11:0,39,967	0/0:22,0:22:60.18:0,60,1608	1/1:13,6:20:39.11:1336,39,0	1/1:8,12:21:33.11:1550,33,0	1/1:13,7:21:36.12:1607,36,0	1/1:8,13:22:48.16:1954,48,0	0/0:32,0:32:84.27:0,84,2370	0/0:29,0:29:78.24:0,78,2088	0/0:30,0:30:69.19:0,69,1773	1/1:19,18:42:69.24:3222,69,0	0/0:21,0:21:51.18:0,51,1398	0/0:39,0:39:99:0,108,2993	0/0:32,0:32:78.22:0,78,2169	1/1:16,4:20:30.10:1071,30,0	1/1:9,7:17:39.13:1543,39,0	1/1:16,7:23:21.07:487,21,0	0/0:10,0:10:24.08:0,24,700	0/0:10,0:10:30.10:0,30,875	0/0:18,0:18:54.19:0,54,1505	1/1:9,3:13:21.07:679,21,0	1/1:7,8:17:36.12:1508,36,0	1/1:9,11:22:42.14:1927,42,0	1/1:7,6:13:21.07:976,21,0
chr10	57300350	.	G	GC	3829.99	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-3.921;DP=487;FS=31.774;HRun=7;HaplotypeScore=55.4215;InbreedingCoeff=0.9755;MQ=80.64;MQ0=0;MQRankSum=-2.424;QD=22.93;ReadPosRankSum=0.802;VQSLOD=1.7306;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:93.15:0,93,897	1/1:2,5:7:15.05:181,15,0	0/0:13,0:13:32.69:0,33,288	0/0:14,0:14:23.67:0,24,237	0/0:14,0:14:42.07:0,42,405	0/0:23,0:23:54.07:0,54,521	0/0:36,0:36:96.58:0,97,919	1/1:10,7:17:18.04:206,18,0	1/1:4,7:11:21.06:254,21,0	1/1:4,13:17:33.09:387,33,0	1/1:1,9:10:21.06:254,21,0	0/0:29,0:29:78.11:0,78,751	0/0:17,0:17:42.06:0,42,404	0/0:23,0:23:63.10:0,63,608	1/1:2,8:10:24.07:290,24,0	0/0:20,0:20:48.07:0,48,463	0/0:37,0:37:99:0,105,1006	0/0:23,0:23:66:0,66,618	1/1:3,6:9:18.02:202,18,0	1/1:0,6:6:18.06:217,18,0	1/1:5,30:35:75.23:906,75,0	0/0:8,0:8:21.03:0,21,202	0/0:7,0:7:21.03:0,21,201	0/0:25,0:25:63.09:0,63,608	1/1:0,10:10:18.05:217,18,0	1/1:3,13:16:36.07:398,36,0	1/1:0,13:13:21.06:247,21,0	1/1:2,4:6:6.02:72,6,0
chr10	57302398	.	A	AT	10068.21	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-17.510;DP=682;FS=8.479;HRun=3;HaplotypeScore=61.3493;InbreedingCoeff=1.0000;MQ=86.25;MQ0=0;MQRankSum=-1.638;QD=38.72;ReadPosRankSum=2.216;VQSLOD=4.8263;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,111,1330	0/0:11,0:11:33.10:0,33,396	0/0:24,0:24:66.20:0,66,786	0/0:25,0:25:66.15:0,66,739	0/0:25,0:25:69.18:0,69,804	0/0:30,0:30:86.63:0,87,1016	0/0:25,0:25:75.22:0,75,888	0/0:30,0:30:81.23:0,81,953	1/1:0,27:27:78.26:1092,78,0	1/1:3,22:25:69.21:942,69,0	1/1:1,21:22:60.20:840,60,0	0/0:15,0:15:45.14:0,45,539	0/0:21,0:21:63.19:0,63,756	0/0:31,0:31:93.28:0,93,1106	1/1:0,17:17:45.15:630,45,0	0/0:27,0:27:78.24:0,78,936	0/0:28,0:28:78.24:0,78,936	0/0:25,0:25:72.22:0,72,864	1/1:1,20:21:57.19:795,57,0	1/1:1,23:24:72.19:973,72,0	1/1:0,23:23:63.21:882,63,0	0/0:21,0:21:57.11:0,57,665	0/0:20,0:20:60.18:0,60,720	0/0:26,0:26:75.22:0,75,888	1/1:1,20:20:57.19:798,57,0	1/1:0,32:32:96.29:1310,96,0	1/1:4,27:30:81.27:1134,81,0	1/1:1,16:17:48.16:672,48,0
chr10	57303450	.	T	TG	5697.04	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=0.643;DP=623;FS=6.787;HRun=6;HaplotypeScore=88.7751;InbreedingCoeff=0.9974;MQ=91.48;MQ0=0;MQRankSum=-8.530;QD=29.83;ReadPosRankSum=0.427;VQSLOD=5.0895;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,117,1178	0/0:6,0:6:18.04:0,18,183	0/0:26,0:26:63.11:0,63,633	0/0:27,0:27:62.89:0,63,680	0/0:20,0:20:45.10:0,45,459	0/0:19,0:19:51.11:0,51,520	0/0:25,0:25:69.10:0,69,676	0/0:27,0:26:66.14:0,66,674	1/1:2,14:16:36.12:453,36,0	1/1:4,11:15:36.11:450,36,0	1/1:3,10:13:21.07:264,21,0	0/0:33,0:33:87.19:0,87,887	0/0:25,0:25:72.16:0,72,734	0/0:16,0:16:45.10:0,45,459	1/1:2,19:21:57.06:675,57,0	0/0:29,0:29:81.17:0,81,820	0/0:44,0:44:99:0,120,1216	0/0:31,0:31:90.15:0,90,900	1/1:3,25:28:75.22:929,75,0	1/1:1,12:13:33.11:415,33,0	1/1:7,27:34:69.18:850,69,0	0/0:15,0:15:33.07:0,33,336	0/0:15,0:15:36.05:0,36,358	0/0:30,0:30:84.17:0,84,849	1/1:1,9:10:27.09:339,27,0	1/1:5,13:18:42.13:527,42,0	1/1:2,14:16:43.38:530,43,0	1/1:0,7:7:21.07:264,21,0
chr10	57303499	.	CAAA	C	7950.92	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=18.179;DP=581;FS=6.601;HRun=3;HaplotypeScore=135.7363;InbreedingCoeff=0.9970;MQ=86.13;MQ0=0;MQRankSum=-17.595;QD=51.63;ReadPosRankSum=0.380;VQSLOD=4.2128;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,117,2826	0/0:13,0:13:39.13:0,39,962	0/0:22,0:22:63.21:0,63,1289	0/0:22,0:22:63.04:0,63,1265	0/0:22,0:22:66.23:0,66,1570	0/0:26,0:26:78.27:0,78,1882	0/0:19,0:19:57.20:0,57,1396	0/0:26,0:26:78.27:0,78,1832	1/1:0,19:19:57.20:992,57,0	1/1:0,23:23:69.24:1227,69,0	1/1:0,9:9:27.09:464,27,0	0/0:38,0:38:99:0,114,2701	0/0:23,0:23:66.23:0,66,1546	0/0:22,0:22:63.22:0,63,1531	1/1:1,14:15:45.15:772,45,0	0/0:20,0:20:60.21:0,60,1440	0/0:34,0:34:99:0,102,2444	0/0:30,0:30:90.29:0,90,2126	1/1:0,12:13:39.13:703,39,0	1/1:1,13:14:42.14:725,42,0	1/1:0,8:8:20.99:302,21,0	0/0:14,0:14:42.14:0,42,1036	0/0:21,0:21:63.22:0,63,1503	0/0:35,0:35:99:0,105,2546	1/1:0,14:15:45.15:780,45,0	1/1:0,17:17:51.17:878,51,0	1/1:0,16:16:48.16:840,48,0	1/1:0,5:5:15.05:268,15,0
chr10	57303505	.	AT	A	5761.59	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=18.270;DP=599;FS=8.902;HRun=2;HaplotypeScore=122.1997;InbreedingCoeff=0.9961;MQ=84.89;MQ0=0;MQRankSum=-17.737;QD=37.41;ReadPosRankSum=1.548;VQSLOD=3.6932;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,123,1953	0/0:13,0:13:39.13:0,39,623	0/0:19,0:19:24.92:0,25,702	0/0:24,0:24:60.04:0,60,801	0/0:23,0:23:69.20:0,69,1053	0/0:25,0:25:75.26:0,75,1199	0/0:22,0:22:66.19:0,66,1008	0/0:28,0:28:84.27:0,84,1294	1/1:0,19:19:57.18:725,57,0	1/1:0,23:23:69.22:906,69,0	1/1:0,9:9:27.09:339,27,0	0/0:39,0:39:99:0,117,1817	0/0:23,0:23:66.23:0,66,1055	0/0:26,0:26:78.27:0,78,1232	1/1:0,14:14:39.13:500,39,0	0/0:21,0:21:63.21:0,63,1007	0/0:37,0:37:99:0,111,1697	0/0:30,0:30:87.30:0,87,1391	1/1:1,12:13:36.12:484,36,0	1/1:0,13:13:39.13:496,39,0	1/1:1,8:9:18.05:217,18,0	0/0:18,0:18:54.17:0,54,837	0/0:20,0:20:60.20:0,60,959	0/0:36,0:36:99:0,108,1708	1/1:2,14:16:48.15:615,48,0	1/1:1,16:17:51.16:666,51,0	1/1:0,16:16:48.15:616,48,0	1/1:0,5:5:15.05:198,15,0
chr10	57303601	.	G	GC	7315.18	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-6.063;DP=653;FS=17.551;HRun=6;HaplotypeScore=79.5331;InbreedingCoeff=0.9979;MQ=78.53;MQ0=0;MQRankSum=-3.507;QD=30.74;ReadPosRankSum=-1.447;VQSLOD=2.9374;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,102,1041	0/0:7,0:7:21.05:0,21,214	0/0:11,0:11:27.05:0,27,268	0/0:18,0:19:45.02:0,45,434	0/0:20,0:20:48.09:0,48,482	0/0:26,0:26:75.17:0,75,765	0/0:29,0:29:81.18:0,81,826	0/0:25,0:25:57.10:0,57,572	1/1:3,22:25:63.20:793,63,0	1/1:3,22:25:66.21:830,66,0	1/1:3,7:10:21.02:246,21,0	0/0:25,0:25:66.13:0,66,667	0/0:24,0:24:66.14:0,66,673	0/0:28,0:28:69.14:0,69,697	1/1:0,17:17:42.13:528,42,0	0/0:15,0:16:44.13:0,44,435	0/0:34,0:34:90.20:0,90,918	0/0:43,0:43:99:0,117,1175	1/1:2,8:10:24.08:302,24,0	1/1:3,28:31:75.71:944,76,0	1/1:1,56:57:99:1838,147,0	0/0:22,0:22:60.11:0,60,599	0/0:13,0:13:29.59:0,30,304	0/0:31,0:31:81.18:0,81,826	1/1:3,12:15:24.08:302,24,0	1/1:4,19:23:54.15:664,54,0	1/1:0,10:10:30.10:377,30,0	1/1:2,13:15:39.12:491,39,0
chr10	57304119	.	C	CAT	18097.89	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-3.943;DP=816;FS=0.265;HRun=0;HaplotypeScore=106.1304;InbreedingCoeff=0.9987;MQ=81.08;MQ0=0;MQRankSum=-3.992;QD=54.51;ReadPosRankSum=1.899;VQSLOD=5.2954;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,111,1747	0/0:10,0:10:27.09:0,27,423	0/0:32,0:31:91.52:0,92,1357	0/0:37,0:38:96.37:0,96,1495	0/0:23,0:23:57.01:0,57,865	0/0:23,0:23:69.24:0,69,1123	0/0:34,0:34:96.31:0,96,1526	0/0:27,0:27:75.17:0,75,1162	1/1:2,31:33:38.42:1652,38,0	1/1:1,30:31:90.31:1812,90,0	1/1:0,16:17:42.14:849,42,0	0/0:42,0:42:99:0,114,1815	0/0:34,0:34:99:0,99,1542	0/0:34,0:34:96.31:0,96,1534	1/1:2,41:43:99:2314,114,0	0/0:35,0:35:99:0,102,1634	0/0:23,0:23:63.13:0,63,945	0/0:18,0:18:54.18:0,54,875	1/1:0,25:26:78.27:1549,78,0	1/1:0,24:24:63.22:1279,63,0	1/1:0,68:69:99:3753,187,0	0/0:21,0:21:60.05:0,60,915	0/0:20,0:20:51.17:0,51,819	0/0:30,0:30:87.25:0,87,1345	1/1:0,19:20:51.18:1035,51,0	1/1:0,28:30:87.26:1665,87,0	1/1:1,32:32:90.31:1826,90,0	1/1:0,6:6:18.06:365,18,0
chr10	57304213	.	CAG	C	12505.22	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=17.433;DP=690;FS=1.256;HRun=0;HaplotypeScore=102.0430;InbreedingCoeff=0.9994;MQ=84.20;MQ0=0;MQRankSum=-2.562;QD=45.98;ReadPosRankSum=3.329;VQSLOD=6.3290;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:90.30:0,90,1755	0/0:11,0:11:33.11:0,33,670	0/0:21,0:21:54.01:0,54,988	0/0:22,0:22:56.18:0,56,1009	0/0:23,0:23:63.15:0,63,1114	0/0:23,0:23:69.19:0,69,1292	0/0:26,0:26:78.27:0,78,1547	0/0:33,0:33:99:0,99,1964	1/1:2,26:28:84.29:1362,84,0	1/1:0,30:30:81.27:1296,81,0	1/1:1,7:9:24.08:380,24,0	0/0:29,0:29:87.28:0,87,1663	0/0:25,0:25:75.22:0,75,1397	0/0:35,0:35:99:0,105,2084	1/1:4,34:38:99:1826,114,0	0/0:32,0:32:96.33:0,96,1925	0/0:29,0:29:87.26:0,87,1650	0/0:14,0:13:42.14:0,42,853	1/1:0,19:19:57.05:858,57,0	1/1:2,22:24:66.01:1037,66,0	1/1:5,48:53:99:2482,156,0	0/0:22,0:22:63.11:0,63,1136	0/0:21,0:21:60.09:0,60,1086	0/0:22,0:22:66.23:0,66,1325	1/1:0,22:22:60.20:975,60,0	1/1:2,16:18:54.17:846,54,0	1/1:5,18:23:69.23:1082,69,0	1/1:0,8:8:24.04:362,24,0
chr10	57304412	.	GA	G	9216.77	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=19.399;DP=653;FS=5.985;HRun=3;HaplotypeScore=110.2308;InbreedingCoeff=0.9992;MQ=74.83;MQ0=0;MQRankSum=-2.666;QD=33.89;ReadPosRankSum=0.950;VQSLOD=4.4523;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:96.29:0,96,1343	0/0:13,0:13:39.13:0,39,562	0/0:15,0:15:42.14:0,42,592	0/0:11,0:11:22.70:0,23,360	0/0:29,0:29:87.28:0,87,1235	0/0:16,0:16:48.15:0,48,672	0/0:23,0:23:66.22:0,66,950	0/0:18,0:18:51.17:0,51,734	1/1:2,26:28:23:738,23,0	1/1:2,23:25:69.17:837,69,0	1/1:0,15:15:42.13:516,42,0	0/0:28,0:28:81.26:0,81,1147	0/0:20,0:20:60.18:0,60,845	0/0:25,0:25:72.24:0,72,1037	1/1:0,28:28:78.25:967,78,0	0/0:24,0:24:72.24:0,72,1037	0/0:31,0:31:87.27:0,87,1232	0/0:23,0:23:69.23:0,69,992	1/1:0,29:29:87.27:1079,87,0	1/1:0,19:19:57.18:706,57,0	1/1:0,31:31:84.26:1041,84,0	0/0:28,0:28:84.26:0,84,1174	0/0:21,0:21:60.17:0,60,810	0/0:24,0:24:72.20:0,72,1014	1/1:1,33:34:93.29:1150,93,0	1/1:0,26:26:78.24:956,78,0	1/1:2,24:26:65.61:818,66,0	1/1:0,11:11:33.10:409,33,0
chr10	57304521	.	T	TC	11550.74	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=19.078;DP=659;FS=2.426;HRun=5;HaplotypeScore=96.6717;InbreedingCoeff=0.9996;MQ=84.48;MQ0=0;MQRankSum=-4.684;QD=41.40;ReadPosRankSum=3.699;VQSLOD=2.5013;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:75.24:0,75,969	0/0:10,0:10:30.10:0,30,389	0/0:28,0:28:78.68:0,79,985	0/0:21,0:21:63.20:0,63,811	0/0:25,0:25:75.23:0,75,956	0/0:18,0:18:51.15:0,51,647	0/0:23,0:23:69.22:0,69,892	0/0:21,0:21:57.17:0,57,715	1/1:0,33:33:90.30:1338,90,0	1/1:1,16:17:48.16:715,48,0	1/1:1,9:10:24.08:359,24,0	0/0:32,0:32:96.31:0,96,1240	0/0:23,0:23:69.21:0,69,881	0/0:24,0:24:69.22:0,69,894	1/1:1,24:25:75.25:1109,75,0	0/0:19,0:19:57.19:0,57,738	0/0:30,0:30:90.24:0,90,1135	0/0:20,0:20:57.19:0,57,738	1/1:3,21:24:69.23:1015,69,0	1/1:2,25:27:78.26:1152,78,0	1/1:0,52:53:99:2159,147,0	0/0:19,0:19:54.18:0,54,701	0/0:17,0:17:51.17:0,51,662	0/0:23,0:23:69.21:0,69,878	1/1:0,26:26:69.23:1033,69,0	1/1:3,20:23:63.21:923,63,0	1/1:1,24:24:69.23:1032,69,0	1/1:0,16:16:48.16:716,48,0
chr10	57304952	.	T	TG	9199.06	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=19.315;DP=613;FS=6.146;HRun=0;HaplotypeScore=106.8090;InbreedingCoeff=0.9900;MQ=89.90;MQ0=0;MQRankSum=-6.581;QD=43.19;ReadPosRankSum=4.030;VQSLOD=4.5828;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,129,1735	0/0:4,0:4:12.04:0,12,168	0/0:27,0:27:81.25:0,81,1097	0/0:23,0:23:66.15:0,66,843	0/0:19,0:19:57.18:0,57,779	0/0:14,0:14:39.13:0,39,545	0/0:34,0:34:99:0,102,1413	0/0:35,0:35:99:0,102,1424	1/1:0,28:28:81.28:1281,81,0	1/1:0,25:25:72.25:1144,72,0	1/1:1,9:10:18.06:287,18,0	0/0:19,0:19:57.19:0,57,797	0/0:20,0:20:60.20:0,60,837	0/0:26,0:26:78.25:0,78,1071	1/1:0,26:26:75.26:1197,75,0	0/0:21,0:21:63.18:0,63,846	0/0:30,0:30:84.28:0,84,1175	0/0:23,0:23:66.20:0,66,904	1/1:1,12:13:36.12:575,36,0	1/1:0,14:14:42.14:669,42,0	1/1:0,30:30:65.96:1037,66,0	0/0:19,0:19:57.19:0,57,795	0/0:16,0:16:48.16:0,48,667	0/0:26,0:26:71.98:0,72,967	1/1:0,18:18:45.15:718,45,0	1/1:0,14:14:42.14:671,42,0	1/1:0,31:31:90.31:1428,90,0	1/1:0,4:4:12.04:191,12,0
chr10	57306053	.	G	GT	2626.20	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=7.841;DP=510;FS=7.572;HRun=3;HaplotypeScore=88.6043;InbreedingCoeff=0.9576;MQ=83.22;MQ0=6;MQRankSum=-8.966;QD=14.75;ReadPosRankSum=-3.930;VQSLOD=1.7173;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:81.16:0,81,916	1/1:6,0:6:14.64:86,15,0	0/0:57,0:33:66.47:0,66,666	0/0:52,0:23:21.76:0,22,247	0/0:20,0:20:51.11:0,51,583	0/0:21,0:21:48.13:0,48,558	0/0:27,0:27:74.62:0,75,842	1/1:25,0:24:54.22:433,54,0	1/1:10,0:10:9:84,9,0	1/1:15,0:15:24.78:204,25,0	1/1:6,1:7:17.83:138,18,0	0/0:19,0:19:57.14:0,57,659	0/0:9,0:9:27.07:0,27,308	0/0:10,0:10:27.07:0,27,308	1/1:3,11:14:6.02:70,6,0	0/0:18,0:18:33.09:0,33,387	1/1:14,0:14:33.69:248,34,0	0/0:16,0:16:45.06:0,45,509	1/1:19,1:20:34.65:272,35,0	1/1:4,5:9:20.77:156,21,0	1/1:5,0:4:5.97:46,6,0	0/0:13,0:13:36.08:0,36,403	0/0:11,0:11:29.99:0,30,322	0/0:15,0:15:39.12:0,39,467	1/1:15,0:15:35.56:291,36,0	1/1:13,2:15:38.69:349,39,0	1/1:14,1:15:39.58:307,40,0	1/1:5,3:8:23.20:169,23,0
chr10	57306065	.	GAA	G	1712.20	PASS	AB=0.920;AC=21;AF=0.375;AN=56;BaseQRankSum=7.612;DP=558;FS=0.888;HRun=2;HaplotypeScore=103.7702;InbreedingCoeff=0.3348;MQ=75.85;MQ0=13;MQRankSum=-7.358;QD=8.78;ReadPosRankSum=-2.097;VQSLOD=-0.2405;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:81.24:0,81,1392	1/1:1,2:3:8.86:84,9,0	0/0:72,0:31:59.65:0,60,940	0/0:63,1:29:40.39:0,40,547	0/0:18,0:18:49.71:0,50,830	0/0:22,0:22:56.56:0,57,1071	0/0:24,0:24:72.19:0,72,1226	0/1:28,0:23:20.98:315,0,21	0/1:3,0:9:17.86:18,0,20	0/1:10,2:12:45.46:95,0,45	1/1:7,1:9:18.11:148,18,0	0/0:19,0:19:54.17:0,54,1039	0/0:12,0:12:36.12:0,36,707	0/0:13,0:13:36.12:0,36,695	0/1:9,0:9:27.09:27,0,39	0/0:17,0:18:36.12:0,36,641	1/1:12,1:12:14.04:89,14,0	0/0:15,0:15:45.12:0,45,813	0/1:19,4:23:87.53:166,0,88	1/1:15,1:16:0.31:147,0,0	1/1:6,1:6:2.96:19,3,0	0/0:12,0:12:36.12:0,36,682	0/0:10,0:10:27.08:0,27,498	0/0:18,0:18:54.18:0,54,1053	1/1:16,1:18:1.83:216,2,0	0/1:15,4:19:29.16:277,0,29	0/1:17,2:19:42.23:181,0,42	1/1:9,0:10:9.15:112,9,0
chr10	57306068	.	G	GA	1606.96	PASS	AB=0.899;AC=37;AF=0.661;AN=56;BaseQRankSum=5.808;DP=572;FS=11.803;HRun=12;HaplotypeScore=107.2283;InbreedingCoeff=0.5157;MQ=75.26;MQ0=13;MQRankSum=-4.891;QD=4.55;ReadPosRankSum=-3.878;VQSLOD=-0.1623;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,37:47:31.35:497,31,0	1/1:4,0:4:0.89:2,1,0	0/0:71,0:30:23.86:0,24,165	0/0:65,0:31:8.93:0,9,129	0/1:7,10:17:23.16:106,0,23	0/0:20,5:25:15.46:0,15,277	0/1:21,0:22:21.86:22,0,199	1/1:33,0:28:9.65:26,10,0	1/1:9,0:9:7.68:33,8,0	1/1:13,0:13:22.60:115,23,0	1/1:10,0:10:13.68:71,14,0	0/0:16,2:18:18.53:0,19,298	0/1:11,2:13:8.37:8,0,110	0/1:14,0:14:18.61:19,0,141	1/1:9,0:9:16.07:84,16,0	1/1:6,15:21:20.87:189,21,0	1/1:14,0:13:3.52:10,4,0	0/1:15,0:16:14.51:15,0,79	1/1:22,0:22:17.78:86,18,0	1/1:15,0:15:23.97:119,24,0	1/1:7,0:6:2.22:7,2,0	0/0:13,0:13:23.80:0,24,175	0/0:9,0:9:17.87:0,18,131	0/0:18,0:18:44.20:0,44,314	1/1:16,0:16:21.02:101,21,0	1/1:19,0:19:24.94:126,25,0	1/1:20,0:20:12.58:88,13,0	1/1:12,0:12:15.79:75,16,0
chr10	57306079	.	A	AAAAAG	4166.66	PASS	AB=0.917;AC=26;AF=0.464;AN=56;BaseQRankSum=5.914;DP=579;FS=9.062;HRun=0;HaplotypeScore=151.9914;InbreedingCoeff=0.7170;MQ=66.94;MQ0=17;MQRankSum=-5.786;QD=18.27;ReadPosRankSum=-8.730;VQSLOD=-0.3660;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:56.79:0,57,503	0/1:3,0:3:6.98:14,0,7	0/0:64,0:23:17.32:0,17,304	0/0:63,0:26:43.36:0,43,444	0/0:14,0:14:20.64:0,21,197	0/0:27,0:27:59.96:0,60,869	0/0:21,0:21:43.18:0,43,668	0/1:31,0:26:3.84:242,0,4	1/1:8,0:9:14.96:153,15,0	1/1:4,9:18:40.40:574,40,0	1/1:6,0:10:24.04:209,24,0	0/0:20,0:20:51.03:0,51,793	0/0:12,0:12:23.79:0,24,337	0/0:17,0:17:33.69:0,34,511	1/1:12,0:14:37.52:360,38,0	0/0:21,0:21:26.35:0,26,185	0/1:14,0:13:10.14:76,0,10	0/1:8,0:16:99:115,0,132	1/1:18,0:20:45.18:446,45,0	1/1:15,0:16:32.57:282,33,0	1/1:2,0:6:2.97:20,3,0	0/0:16,0:16:35.96:0,36,545	0/0:9,0:9:15.96:0,16,262	0/0:19,0:19:48.02:0,48,766	1/1:17,0:17:39.94:467,40,0	1/1:8,8:22:12.22:583,12,0	1/1:10,0:19:15.11:250,15,0	1/1:9,1:12:21.53:376,22,0
chr10	57306080	.	AGAGAGAG	A	837.30	PASS	AB=1.000;AC=10;AF=0.179;AN=56;BaseQRankSum=5.848;DP=531;FS=2.728;HRun=0;HaplotypeScore=134.5108;InbreedingCoeff=0.3832;MQ=68.05;MQ0=17;MQRankSum=-6.892;QD=11.02;ReadPosRankSum=-6.894;VQSLOD=-0.0615;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:17.42:0,17,2200	1/1:0,0:2:6.02:108,6,0	0/0:61,0:22:36.08:0,36,550	0/0:64,0:28:42.84:0,43,1040	0/0:12,0:12:27.06:0,27,921	0/0:27,0:27:60.12:0,60,2177	0/0:19,0:20:16.42:0,16,1651	1/1:10,2:16:24.50:456,24,0	0/0:7,0:7:5.27:0,5,289	0/0:17,0:17:9.30:0,9,1225	0/1:8,0:8:34.22:34,0,267	0/0:20,0:20:54.10:0,54,1821	0/0:12,0:12:23.99:0,24,792	0/0:15,0:17:7.51:0,8,1028	0/0:14,0:14:2.98:0,3,871	0/0:18,0:18:30.10:0,30,965	1/1:2,5:10:15.99:301,16,0	0/0:16,0:16:27.31:0,27,865	0/0:15,0:15:2.47:0,2,731	0/1:15,0:15:72.68:73,0,272	0/1:8,0:7:2.02:2,0,93	0/0:15,0:15:39.10:0,39,1461	0/0:9,0:9:23.94:0,24,510	0/0:18,0:18:48.08:0,48,1655	0/1:14,0:14:11.87:12,0,647	0/0:20,0:20:29.36:0,29,1470	0/0:16,0:16:12.59:0,13,577	0/0:10,0:10:2.12:0,2,541
chr10	57306757	.	A	AT	6204.36	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=2.680;DP=660;FS=4.440;HRun=7;HaplotypeScore=89.8428;InbreedingCoeff=0.9896;MQ=83.45;MQ0=0;MQRankSum=-1.826;QD=29.40;ReadPosRankSum=0.047;VQSLOD=4.9683;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,120,1152	0/0:10,0:10:30.02:0,30,277	0/0:21,0:22:42.01:0,42,392	0/0:18,0:19:20.17:0,20,197	0/0:18,1:19:8.81:0,9,363	0/0:28,0:28:69.10:0,69,666	0/0:30,0:30:78.10:0,78,747	0/0:33,0:33:78.10:0,78,750	1/1:4,23:27:75.21:882,75,0	1/1:4,21:25:63.19:761,63,0	1/1:4,7:11:23.66:290,24,0	0/0:25,0:26:71.14:0,71,672	0/0:19,0:19:48.06:0,48,458	0/0:25,0:25:63.07:0,63,601	1/1:5,20:25:69.17:817,69,0	0/0:30,0:30:81.08:0,81,767	0/0:39,0:39:99:0,102,973	0/0:23,0:23:54.05:0,54,514	1/1:6,12:18:42.08:484,42,0	1/1:0,8:8:24.04:274,24,0	1/1:5,12:17:30.09:362,30,0	0/0:14,0:14:33.04:0,33,313	0/0:14,0:14:39.06:0,39,377	0/0:53,0:53:99:0,129,1225	1/1:5,14:19:50.88:574,51,0	1/1:5,21:26:66.18:782,66,0	1/1:0,17:17:54.17:652,54,0	1/1:8,9:17:27.08:326,27,0
chr10	57306822	.	GCC	G	6391.08	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=16.811;DP=508;FS=9.335;HRun=5;HaplotypeScore=99.8372;InbreedingCoeff=0.9797;MQ=82.57;MQ0=0;MQRankSum=-7.290;QD=35.90;ReadPosRankSum=2.758;VQSLOD=3.7316;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,105,1888	0/0:11,0:11:33.11:0,33,600	0/0:17,0:17:42.14:0,42,770	0/0:15,0:15:33.11:0,33,560	0/0:9,0:9:27.09:0,27,494	0/0:22,0:22:66.23:0,66,1209	0/0:37,0:37:99:0,111,1964	0/0:22,0:22:63.22:0,63,1150	1/1:1,20:21:57.19:791,57,0	1/1:3,11:14:33.11:452,33,0	1/1:1,6:7:15.05:197,15,0	0/0:17,0:17:51.17:0,51,926	0/0:19,0:19:57.20:0,57,1045	0/0:22,0:22:66.23:0,66,1210	1/1:0,20:20:57.18:775,57,0	1/1:0,13:13:39.13:546,39,0	0/0:38,0:37:99:0,108,1934	1/1:1,14:15:36.12:504,36,0	1/1:1,9:10:27.09:372,27,0	1/1:0,3:3:8.99:104,9,0	1/1:1,29:30:66.10:892,66,0	0/0:5,0:5:12.04:0,12,214	0/0:6,0:6:18.06:0,18,317	0/0:55,0:55:99:0,157,2822	1/1:0,11:11:33.11:461,33,0	1/1:3,15:18:45.15:625,45,0	1/1:0,12:12:36.12:504,36,0	1/1:1,3:4:12.04:167,12,0
chr10	57308682	.	G	GT	12841.85	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-12.315;DP=685;FS=2.816;HRun=6;HaplotypeScore=70.9698;InbreedingCoeff=0.9975;MQ=91.72;MQ0=0;MQRankSum=-2.749;QD=41.97;ReadPosRankSum=3.730;VQSLOD=2.4815;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:84.28:0,84,1171	0/0:9,0:9:24.04:0,24,295	0/0:34,0:34:87.28:0,87,1285	0/0:22,0:22:51.17:0,51,759	0/0:32,0:32:93.31:0,93,1291	0/0:28,0:28:78.22:0,78,1036	0/0:22,0:22:66.20:0,66,899	0/0:36,0:36:99:0,105,1435	1/1:1,21:22:53.93:863,54,0	1/1:0,36:37:99:1722,111,0	1/1:0,18:18:48.16:765,48,0	0/0:21,0:21:60.20:0,60,837	0/0:34,0:34:99:0,99,1360	0/0:29,0:29:87.28:0,87,1197	1/1:0,26:26:72.25:1151,72,0	1/1:1,18:19:48.16:767,48,0	0/0:24,0:24:72.24:0,72,1004	1/1:2,8:10:15.50:326,15,0	1/1:1,20:21:60.19:918,60,0	1/1:2,37:39:93.31:1432,93,0	1/1:0,29:29:78.27:1246,78,0	0/0:20,0:20:60.18:0,60,797	0/0:21,0:21:63.21:0,63,873	0/0:18,0:17:54.18:0,54,752	1/1:0,19:19:48.16:766,48,0	1/1:0,25:25:75.24:1163,75,0	1/1:0,31:31:84.29:1339,84,0	1/1:0,10:10:24.08:383,24,0
chr10	57309380	.	A	AC	2143.99	PASS	AC=22;AF=1.000;AN=22;BaseQRankSum=-1.079;DP=286;FS=0.000;HRun=0;HaplotypeScore=45.4128;InbreedingCoeff=-0.0449;MQ=14.21;MQ0=216;MQRankSum=-0.703;QD=15.76;ReadPosRankSum=2.486;VQSLOD=4.7116;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	1/1:1,3:3:9.03:140,9,0	./.	./.	1/1:8,8:9:20.41:246,20,0	./.	./.	./.	./.	1/1:6,4:4:12.04:186,12,0	1/1:6,9:10:19.02:325,19,0	./.	./.	./.	./.	./.	./.	./.	./.	1/1:3,9:10:19.73:332,20,0	./.	1/1:7,9:9:26.29:178,26,0	1/1:6,9:9:25.18:190,25,0	./.	1/1:5,9:9:27.09:414,27,0	1/1:4,1:2:5.93:65,6,0	1/1:7,3:3:6.02:93,6,0	1/1:15,1:1:3.01:48,3,0
chr10	57309882	.	G	GA	71	PASS	AB=0.966;AC=8;AF=0.143;AN=56;BaseQRankSum=5.659;DP=324;FS=0.000;HRun=0;HaplotypeScore=86.4305;InbreedingCoeff=0.0090;MQ=42.24;MQ0=28;MQRankSum=-2.994;QD=0.80;ReadPosRankSum=1.331;VQSLOD=1.4378;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:12:33.11:0,33,459	0/0:2,0:2:5.98:0,6,62	1/1:8,0:2:2.04:6,2,0	0/1:15,0:3:4.17:4,0,10	0/0:6,1:7:11.07:0,11,131	0/0:9,1:10:2.88:0,3,293	0/1:19,0:16:95.60:96,0,316	0/0:20,1:15:13.15:0,13,352	0/0:8,0:7:7.05:0,7,215	0/0:15,0:14:31.49:0,31,369	0/0:13,0:13:20.86:0,21,203	0/0:11,0:9:19.11:0,19,299	0/0:11,0:10:23.80:0,24,245	0/0:8,0:7:17.53:0,18,199	0/0:12,1:13:4.30:0,4,211	0/0:14,0:13:32.46:0,32,221	0/0:16,0:14:38.64:0,39,445	0/1:6,0:4:23.40:29,0,23	0/0:12,0:8:21.03:0,21,271	0/0:7,0:7:14.16:0,14,208	0/0:7,0:5:13.86:0,14,173	0/1:14,1:14:33.30:33,0,250	0/0:11,1:12:28.68:0,29,290	0/0:13,0:12:21.51:0,22,155	0/0:15,0:15:25.05:0,25,367	0/1:11,1:11:16.89:17,0,269	0/0:6,0:5:13.21:0,13,132	0/1:13,1:13:0.42:0,0,313
chr10	57309884	.	G	GGAGGAA	2028.78	PASS	AB=0.965;AC=22;AF=0.393;AN=56;BaseQRankSum=9.180;DP=338;FS=14.752;HRun=0;HaplotypeScore=109.7338;InbreedingCoeff=-0.4761;MQ=42.75;MQ0=28;MQRankSum=-7.047;QD=7.51;ReadPosRankSum=-1.462;VQSLOD=1.3125;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:13:34.31:0,34,605	0/0:2,0:2:6.02:0,6,137	0/0:8,0:2:2.97:0,3,20	0/1:14,0:3:2.31:2,0,29	0/1:7,0:7:13.15:13,0,144	0/1:10,0:10:72.92:73,0,506	0/1:20,0:17:99:235,0,430	0/1:21,0:15:99:102,0,237	0/1:10,0:9:0.64:1,0,310	0/1:16,0:15:9.53:10,0,489	0/1:10,3:13:99:231,0,252	0/1:14,0:12:61.77:62,0,438	0/1:12,0:11:70.27:70,0,264	0/0:7,0:7:15.05:0,15,286	0/1:11,2:13:99:239,0,298	1/1:16,0:15:18.33:317,18,0	0/0:17,0:15:2.65:0,3,601	0/1:6,0:4:1.46:1,0,31	0/0:12,0:8:0.10:0,0,377	0/0:7,0:7:9.46:0,9,350	0/1:7,0:5:0.19:0,0,252	0/1:15,0:14:99:133,0,309	0/1:12,0:12:85.01:85,0,315	0/1:13,0:12:49.36:49,0,372	0/1:14,1:15:99:125,0,456	0/1:12,1:12:99:269,0,358	0/1:6,1:6:99:146,0,135	0/1:14,0:13:11.34:11,0,551
chr10	57309904	.	A	AGGT	372.83	PASS	AB=0.851;AC=3;AF=0.054;AN=56;BaseQRankSum=4.964;DP=411;FS=4.862;HRun=0;HaplotypeScore=112.4037;InbreedingCoeff=0.1373;MQ=54.34;MQ0=25;MQRankSum=-4.867;QD=9.32;ReadPosRankSum=0.709;VQSLOD=3.1424;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:15:33.11:0,33,543	0/0:4,0:4:8.99:0,9,122	0/0:20,0:12:26.15:0,26,280	0/0:19,0:9:20.45:0,20,253	0/0:12,0:12:28.58:0,29,372	0/0:12,0:12:31.18:0,31,511	0/0:25,0:22:44.57:0,45,566	0/0:23,0:18:43.71:0,44,537	0/0:11,0:10:27.06:0,27,394	0/0:17,0:16:15.66:0,16,486	0/0:15,0:16:29.36:0,29,327	0/0:16,0:15:43.01:0,43,670	0/0:12,0:12:21:0,21,324	0/0:8,0:7:21.02:0,21,319	0/0:14,0:14:27.04:0,27,408	0/1:7,11:17:4.54:408,0,5	0/0:22,0:21:58.70:0,59,880	0/1:8,0:6:11.75:53,0,12	0/0:13,0:9:21.07:0,21,358	0/0:10,0:10:25.64:0,26,411	0/0:10,0:8:21.06:0,21,331	0/0:21,0:19:50.48:0,50,566	0/0:14,0:14:27.44:0,27,327	0/0:15,0:14:32.82:0,33,532	0/0:16,0:15:18.88:0,19,428	0/1:13,0:13:1.58:2,0,437	0/0:8,0:8:4.02:0,4,216	0/0:14,0:13:34.89:0,35,467
chr10	57310832	.	T	TTTAA	6824.64	PASS	AC=22;AF=0.423;AN=52;BaseQRankSum=-9.402;DP=444;FS=6.720;HRun=0;HaplotypeScore=64.9915;InbreedingCoeff=0.9815;MQ=62.11;MQ0=1;MQRankSum=-0.273;QD=39.00;ReadPosRankSum=-0.195;VQSLOD=4.1715;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:84.27:0,84,1346	0/0:6,0:6:15.05:0,15,245	./.	./.	0/0:28,0:28:48.16:0,48,774	0/0:17,0:17:33.11:0,33,535	0/0:17,0:17:36.11:0,36,557	0/0:22,0:22:36.12:0,36,582	1/1:3,8:11:21.07:509,21,0	1/1:3,8:11:24.08:562,24,0	1/1:6,15:21:42.14:1008,42,0	0/0:17,0:17:36.09:0,36,533	0/0:19,0:19:45.15:0,45,734	0/0:21,0:21:42.14:0,42,685	1/1:11,7:19:18.05:393,18,0	0/0:17,0:17:36.12:0,36,582	0/0:18,0:18:24.08:0,24,391	0/0:11,0:11:24.06:0,24,367	1/1:6,12:19:42.11:806,42,0	1/1:10,3:13:15.05:316,15,0	1/1:3,3:6:9.03:219,9,0	0/0:9,0:9:18.06:0,18,294	0/0:16,0:16:24.08:0,24,391	0/0:15,0:15:33.11:0,33,524	1/1:10,8:18:24.08:569,24,0	1/1:5,17:22:51.15:1129,51,0	1/1:7,10:18:30.02:668,30,0	1/1:8,9:16:27.09:647,27,0
chr10	57311013	.	C	CTT	2849.12	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=12.916;DP=567;FS=4.512;HRun=8;HaplotypeScore=90.3208;InbreedingCoeff=0.9892;MQ=72.30;MQ0=0;MQRankSum=-1.016;QD=10.83;ReadPosRankSum=2.244;VQSLOD=0.5870;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:78.18:0,78,859	0/0:9,0:9:27.07:0,27,301	0/0:12,0:12:23.59:0,24,242	0/0:14,0:15:18.01:0,18,202	0/0:36,0:36:99:0,102,1137	0/0:21,0:21:54.14:0,54,602	0/0:14,0:14:36.09:0,36,401	0/0:27,0:27:69.13:0,69,750	1/1:1,0:15:34.93:120,35,0	1/1:2,0:20:9.62:117,10,0	1/1:2,0:23:42.42:146,42,0	0/0:19,0:19:57.12:0,57,617	0/0:24,0:24:63.16:0,63,702	0/0:19,0:19:54.12:0,54,592	1/1:1,0:16:27.45:94,27,0	1/1:2,22:24:54.18:857,54,0	0/0:32,0:32:90.24:0,90,1003	1/1:2,17:20:45.11:714,45,0	1/1:5,0:24:46.42:202,46,0	1/1:3,0:28:54.90:189,55,0	1/1:2,0:12:17.47:60,17,0	0/0:19,0:19:54.15:0,54,602	0/0:13,0:13:39.11:0,39,435	0/0:16,0:16:42.08:0,42,457	1/1:3,0:23:44.92:154,45,0	1/1:0,0:27:63.10:229,63,0	1/1:1,0:18:37.43:129,37,0	1/1:4,0:13:19.96:69,20,0
chr10	57311308	.	A	AAGCAGTGACCTG	46947.85	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=-7.278;DP=695;FS=1.285;HRun=0;HaplotypeScore=214.2350;InbreedingCoeff=0.9961;MQ=84.28;MQ0=0;MQRankSum=-19.571;QD=129.69;ReadPosRankSum=-1.552;VQSLOD=4.5169;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,141,5072	1/1:3,6:12:27.09:1369,27,0	0/0:31,0:31:81.21:0,81,2630	0/0:25,0:25:72.21:0,72,2094	0/0:23,0:23:69.20:0,69,2334	0/0:24,0:23:69.24:0,69,2451	0/0:25,0:25:70.09:0,70,2109	1/1:27,6:42:99:4747,114,0	1/1:11,18:33:84.29:4563,84,0	1/1:16,10:28:81.28:4270,81,0	1/1:8,6:14:21.07:1081,21,0	0/0:33,0:33:93.29:0,93,3249	0/0:18,0:18:51.18:0,51,1834	0/0:30,0:30:84.29:0,84,3147	1/1:9,16:27:72.25:4130,72,0	1/1:15,19:36:96.33:5373,96,0	1/1:10,10:24:42.14:2275,42,0	1/1:4,3:8:21.07:1199,21,0	1/1:10,4:18:45.08:1912,45,0	1/1:4,6:10:24.08:1315,24,0	1/1:9,8:21:36.12:2017,36,0	0/0:27,0:27:78.26:0,78,2806	0/0:16,0:16:45.15:0,45,1555	0/0:31,0:31:90.30:0,90,3221	1/1:7,6:12:30.10:1688,30,0	1/1:10,21:35:99:5407,102,0	1/1:10,20:32:87.30:4672,87,0	1/1:2,3:6:15.05:928,15,0
chr10	57311630	.	TG	T	6198.80	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=7.715;DP=547;FS=4.657;HRun=1;HaplotypeScore=56.8367;InbreedingCoeff=0.9422;MQ=62.25;MQ0=3;MQRankSum=-3.483;QD=28.70;ReadPosRankSum=-1.989;VQSLOD=3.9815;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,120,1655	0/0:10,0:10:30.09:0,30,398	0/0:12,0:8:23.07:0,23,260	0/0:13,0:8:17.26:0,17,262	0/0:12,0:12:36.09:0,36,475	0/0:19,0:19:54.12:0,54,710	0/0:22,0:22:60.18:0,60,836	0/0:26,0:26:75.20:0,75,953	1/1:0,17:17:30.10:417,30,0	1/1:2,14:16:40.72:515,41,0	1/1:0,11:11:33.02:416,33,0	0/0:18,0:18:48.15:0,48,652	0/0:21,0:21:60.12:0,60,778	0/0:19,0:19:54.15:0,54,731	1/1:0,19:19:36.12:501,36,0	0/1:15,0:15:4.12:4,0,40	0/0:30,0:31:87.27:0,87,1192	0/0:23,0:23:14.97:0,15,87	1/1:2,22:23:69.07:776,69,0	1/1:5,7:12:26.82:346,27,0	1/1:1,20:21:44.56:577,45,0	0/0:14,0:14:42.14:0,42,586	0/0:12,0:12:36.10:0,36,472	0/0:37,0:36:99:0,102,1372	1/1:4,19:22:59.51:735,60,0	1/1:5,17:22:46.12:772,46,0	1/1:1,19:20:39.84:575,40,0	1/1:4,12:16:41.22:564,41,0
chr10	57311724	.	C	CT	857.66	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=-4.851;DP=421;FS=3.511;HRun=9;HaplotypeScore=41.2876;InbreedingCoeff=0.7177;MQ=67.70;MQ0=7;MQRankSum=0.084;QD=17.15;ReadPosRankSum=-0.093;VQSLOD=3.3289;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:35:95.95:0,96,827	0/0:6,0:6:18:0,18,156	0/0:24,0:16:41.96:0,42,357	0/1:14,0:7:13.62:14,0,84	0/0:24,0:24:63.45:0,63,548	0/0:15,0:15:41.96:0,42,357	0/0:15,0:15:35.97:0,36,312	0/0:22,0:21:59.96:0,60,514	0/0:12,0:11:32.98:0,33,283	0/0:14,0:14:41.99:0,42,364	0/0:15,0:12:35.99:0,36,313	0/0:12,0:12:35.99:0,36,312	0/0:11,0:11:23.96:0,24,207	0/0:9,0:9:26.99:0,27,234	0/0:12,0:12:29.96:0,30,260	1/1:1,12:14:38.93:408,39,0	0/0:24,0:24:65.98:0,66,572	1/1:0,22:22:51.14:564,51,0	0/0:18,0:18:44.97:0,45,390	0/0:13,0:13:35.98:0,36,312	0/0:12,0:11:29.99:0,30,260	0/0:6,0:6:15:0,15,130	0/0:6,0:6:18:0,18,156	0/0:11,0:11:20.98:0,21,182	0/0:18,0:15:38.97:0,39,339	0/0:19,0:18:47.99:0,48,417	0/0:17,0:17:44.97:0,45,385	0/0:1,0:1:3:0,3,26
chr10	57313615	.	CTG	C	412.10	PASS	AB=0.969;AC=8;AF=0.143;AN=56;BaseQRankSum=12.287;DP=885;FS=8.022;HRun=0;HaplotypeScore=219.2658;InbreedingCoeff=0.0787;MQ=60.36;MQ0=7;MQRankSum=-9.764;QD=1.95;ReadPosRankSum=-4.069;VQSLOD=0.8335;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:87.22:0,87,1485	0/0:10,0:10:6.02:0,6,77	0/0:36,0:21:30.33:0,30,420	0/0:52,0:35:7.29:0,7,611	0/0:29,0:29:81.24:0,81,1378	0/0:21,0:21:50.61:0,51,798	0/0:27,0:27:71.69:0,72,1184	0/1:39,0:37:99:273,0,908	0/0:29,1:30:55.67:0,56,523	0/1:41,1:42:83.51:84,0,392	0/0:26,0:26:8.11:0,8,258	0/0:28,0:28:84.26:0,84,1449	0/0:32,0:32:93.28:0,93,1619	0/0:26,0:26:69.19:0,69,1170	0/0:44,5:49:18.29:0,18,371	1/1:23,1:24:12.30:45,12,0	0/0:32,0:32:8.26:0,8,174	0/1:14,0:15:28.81:29,0,36	0/1:20,0:19:26.25:26,0,253	0/0:32,1:33:22.43:0,22,378	0/0:35,0:35:38.91:0,39,549	0/0:27,0:27:75.23:0,75,1301	0/0:20,0:20:54.15:0,54,916	0/0:42,0:42:99:0,117,2001	0/0:36,0:35:57.30:0,57,528	0/1:40,2:42:25.25:25,0,561	0/0:39,1:40:21.36:0,21,564	0/1:27,1:28:69.63:70,0,412
chr10	57313617	.	G	GTGTCTC	1546.74	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=5.609;DP=882;FS=3.695;HRun=0;HaplotypeScore=280.5325;InbreedingCoeff=0.7435;MQ=60.17;MQ0=5;MQRankSum=-6.095;QD=15.47;ReadPosRankSum=-4.113;VQSLOD=2.3169;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:63.20:0,63,1281	1/1:2,7:10:3.01:100,3,0	0/0:36,0:19:20.12:0,20,438	0/0:46,0:35:18.56:0,19,626	0/0:29,0:29:45.15:0,45,919	0/0:20,0:20:44.81:0,45,830	0/0:27,0:27:57.20:0,57,1181	1/1:39,0:38:25.05:1030,25,0	0/0:30,0:30:31.95:0,32,783	0/0:40,0:40:52.54:0,53,1052	0/0:25,0:25:21.07:0,21,426	0/0:28,0:28:69.21:0,69,1391	0/0:33,0:33:72.19:0,72,1375	0/0:25,0:25:60.17:0,60,1161	0/0:50,0:49:35.77:0,36,703	0/0:24,0:24:6.01:0,6,77	1/1:12,20:35:17.94:542,18,0	0/1:16,0:16:12.10:12,0,36	0/0:20,0:20:31.10:0,31,557	0/0:31,0:31:28.53:0,29,657	0/0:34,0:35:60.66:0,61,1210	0/0:26,0:26:56.96:0,57,1115	0/0:19,0:19:36.12:0,36,727	0/0:41,0:41:82.38:0,82,2009	0/0:37,0:35:48.16:0,48,1015	0/0:43,0:42:84.69:0,85,1627	0/0:41,0:41:61.01:0,61,1175	0/0:29,0:29:19.92:0,20,849
chr10	57313623	.	CTG	C	1676.58	PASS	AB=0.761;AC=6;AF=0.107;AN=56;BaseQRankSum=11.551;DP=882;FS=0.475;HRun=0;HaplotypeScore=214.6987;InbreedingCoeff=-0.1244;MQ=60.91;MQ0=7;MQRankSum=-10.552;QD=9.58;ReadPosRankSum=0.237;VQSLOD=3.2516;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:93.24:0,93,1653	0/0:11,0:11:6:0,6,60	0/0:42,0:24:43.07:0,43,734	0/0:52,0:33:41.55:0,42,813	0/0:27,0:27:72.12:0,72,1203	0/0:22,0:22:57.63:0,58,1018	0/0:24,0:24:33.81:0,34,1195	0/0:40,0:39:96.86:0,97,1432	0/0:26,4:30:56.21:0,56,936	0/1:27,12:38:99:433,0,980	0/0:18,8:26:30.10:0,30,574	0/0:28,0:28:84.19:0,84,1526	0/0:31,0:31:93.27:0,93,1673	0/0:24,0:24:69.22:0,69,1285	0/0:33,15:47:37.08:0,37,746	0/1:17,7:24:27.84:121,0,28	0/0:34,0:34:20.89:0,21,232	0/1:8,7:15:82.19:293,0,82	0/1:17,6:22:99:209,0,689	0/0:25,8:33:47.46:0,47,862	0/0:36,0:35:59.97:0,60,1157	0/0:25,0:25:72.21:0,72,1312	0/0:20,0:20:57.08:0,57,966	0/0:42,0:42:99:0,123,2204	0/0:26,10:34:56.91:0,57,1042	0/1:33,12:42:99:395,0,1360	0/0:32,4:36:19.45:0,19,1121	0/1:20,9:29:99:351,0,829
chr10	57313641	.	GTATC	G	344.31	PASS	AB=0.789;AC=3;AF=0.054;AN=56;BaseQRankSum=9.161;DP=878;FS=42.724;HRun=0;HaplotypeScore=243.9542;InbreedingCoeff=-0.0457;MQ=64.33;MQ0=8;MQRankSum=-5.101;QD=4.78;ReadPosRankSum=-0.137;VQSLOD=0.9860;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,100,2604	0/0:10,0:10:11.95:0,12,263	0/0:58,0:38:89.84:0,90,1684	0/0:75,0:44:18.99:0,19,1443	0/0:20,0:20:57.16:0,57,1412	0/0:24,0:24:66.20:0,66,1751	0/0:23,0:23:63.19:0,63,1517	0/0:33,0:32:88.25:0,88,2037	0/0:26,0:26:20.07:0,20,781	0/1:33,2:34:2.77:3,0,1908	0/0:23,0:24:14.33:0,14,298	0/0:32,0:32:96.31:0,96,2555	0/0:29,0:29:87.25:0,87,2181	0/0:22,0:22:63.22:0,63,1749	0/0:44,0:43:24.51:0,25,567	0/1:13,7:21:20.56:142,0,21	0/0:37,0:37:51.26:0,51,1444	0/1:9,2:16:78.59:290,0,79	0/0:27,0:27:74.86:0,75,1713	0/0:25,0:26:38.37:0,38,750	0/0:34,0:33:48.21:0,48,1142	0/0:23,0:23:66.23:0,66,1720	0/0:20,0:20:51.16:0,51,1234	0/0:45,0:45:99:0,132,3522	0/0:30,0:28:44.98:0,45,1022	0/0:38,0:35:95.13:0,95,2429	0/0:33,0:33:49.29:0,49,1433	0/0:23,0:24:67.66:0,68,1618
chr10	57313657	.	C	CTG	537.41	PASS	AB=0.870;AC=4;AF=0.071;AN=56;BaseQRankSum=6.742;DP=905;FS=1.506;HRun=0;HaplotypeScore=214.7356;InbreedingCoeff=0.4313;MQ=63.11;MQ0=13;MQRankSum=-5.431;QD=7.07;ReadPosRankSum=-1.095;VQSLOD=3.3550;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,105,1492	0/0:7,0:7:11.97:0,12,156	0/0:67,0:42:76.16:0,76,967	0/0:94,0:50:68.66:0,69,1045	0/0:21,0:21:57.16:0,57,825	0/0:22,0:22:60.16:0,60,876	0/0:23,0:23:66.10:0,66,952	0/0:30,0:29:81.12:0,81,1090	0/0:28,0:28:40.89:0,41,466	0/0:34,2:34:24.20:0,24,1024	0/0:25,1:26:14.96:0,15,188	0/0:29,0:29:87.28:0,87,1310	0/0:29,0:29:87.22:0,87,1261	0/0:24,0:24:66.16:0,66,921	0/0:41,0:40:18.04:0,18,259	1/1:24,0:25:21.91:279,22,0	0/0:40,0:41:72.91:0,73,1054	0/1:15,0:19:10.35:270,0,10	0/1:29,3:31:99:102,0,959	0/0:24,0:24:3.15:0,3,310	0/0:32,0:31:41.89:0,42,530	0/0:21,0:21:57.07:0,57,850	0/0:17,0:17:45.13:0,45,667	0/0:43,0:43:99:0,126,1903	0/0:25,0:23:23.69:0,24,281	0/0:42,0:38:99:0,109,1260	0/0:39,0:39:77.74:0,78,905	0/0:20,0:20:42.36:0,42,766
chr10	57313661	.	CTG	C	734.55	PASS	AB=0.983;AC=11;AF=0.196;AN=56;BaseQRankSum=9.069;DP=884;FS=9.935;HRun=0;HaplotypeScore=203.7619;InbreedingCoeff=0.0421;MQ=62.72;MQ0=12;MQRankSum=-5.020;QD=2.57;ReadPosRankSum=-3.859;VQSLOD=0.8008;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,99,1817	0/0:7,0:7:8.78:0,9,171	0/0:64,0:42:46.61:0,47,1123	0/0:91,0:48:52.60:0,53,1137	0/0:24,0:24:71.14:0,71,1072	0/0:20,0:20:57.17:0,57,1033	0/0:24,0:24:66.12:0,66,1107	0/0:29,0:28:78.15:0,78,1293	0/1:27,0:27:92.61:93,0,168	0/1:32,0:30:99:104,0,423	0/1:25,0:25:72.88:73,0,77	0/0:29,0:29:87.25:0,87,1572	0/0:30,0:30:90.24:0,90,1599	0/0:23,0:23:66.14:0,66,1103	0/0:40,0:39:17.91:0,18,138	1/1:17,8:25:21.13:198,21,0	0/0:40,0:40:78.05:0,78,1362	0/1:18,3:21:1.19:131,0,1	0/1:30,0:29:59.87:60,0,540	0/1:24,0:24:52.32:52,0,141	0/0:30,0:29:5.09:0,5,254	0/0:22,0:22:60.17:0,60,1074	0/0:17,0:17:48.14:0,48,862	0/0:43,0:43:99:0,126,2337	0/1:22,0:20:10.11:10,0,79	0/1:40,0:36:99:114,0,485	0/1:39,0:40:52.82:53,0,238	0/0:19,0:19:15.33:0,15,463
chr10	57313667	.	CTG	C	2815.27	PASS	AB=0.938;AC=24;AF=0.429;AN=56;BaseQRankSum=13.819;DP=867;FS=18.155;HRun=0;HaplotypeScore=185.6680;InbreedingCoeff=0.8785;MQ=61.24;MQ0=12;MQRankSum=-8.193;QD=8.18;ReadPosRankSum=-5.531;VQSLOD=0.9278;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:96.31:0,96,1792	0/0:6,0:6:8.77:0,9,173	0/0:68,0:48:82.96:0,83,1409	0/0:84,1:44:68.85:0,69,1344	0/0:26,0:26:74.97:0,75,1235	0/0:20,0:20:57.15:0,57,999	0/0:23,0:23:61.44:0,61,1061	0/0:32,0:31:87.19:0,87,1296	1/1:25,0:25:32.80:264,33,0	1/1:27,0:25:17.82:352,18,0	1/1:25,0:25:21.33:164,21,0	0/0:30,0:30:90.26:0,90,1591	0/0:32,0:32:96.21:0,96,1580	0/0:26,0:26:78.18:0,78,1281	1/1:37,0:36:13.85:101,14,0	1/1:19,7:26:16.96:190,17,0	0/0:41,0:41:81.16:0,81,1474	0/1:18,3:21:2.80:130,0,3	0/1:28,0:27:4.45:312,0,4	1/1:21,0:21:23.18:184,23,0	1/1:26,0:26:20.08:167,20,0	0/0:25,0:25:66.11:0,66,1097	0/0:17,0:17:28.53:0,29,804	0/0:45,0:45:99:0,129,2228	1/1:19,0:18:11.62:99,12,0	1/1:34,0:33:54.14:444,54,0	1/1:39,0:39:56.16:429,56,0	1/1:16,0:16:25.35:200,25,0
chr10	57313763	.	GGCGTGCCCCACCAT	G	3860.94	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.086;DP=700;FS=3.260;HRun=0;HaplotypeScore=266.0740;InbreedingCoeff=0.9999;MQ=73.30;MQ0=1;MQRankSum=-8.586;QD=63.29;ReadPosRankSum=0.420;VQSLOD=3.2691;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,23:36:39.13:1663,39,0	0/0:13,0:13:39.13:0,39,2685	0/0:31,0:29:84.29:0,84,4289	0/0:32,0:32:87.30:0,87,4533	1/1:5,20:25:57.19:2198,57,0	0/0:22,0:22:66.23:0,66,3997	0/0:18,0:18:51.18:0,51,2940	0/0:25,0:25:69.24:0,69,4147	0/0:22,0:22:66.23:0,66,4524	0/0:29,0:29:84.29:0,84,5468	0/0:20,0:20:60.21:0,60,4003	0/0:23,0:23:66.23:0,66,4224	0/0:27,0:27:81.26:0,81,4943	0/0:26,0:26:72.25:0,72,4619	0/0:19,0:19:57.20:0,57,3751	0/0:21,0:21:60.21:0,60,3968	0/0:33,0:33:90.31:0,90,5910	0/0:21,0:21:57.20:0,57,3880	0/0:20,0:20:54.18:0,54,3320	0/0:21,0:21:63.22:0,63,4105	0/0:47,0:47:99:0,129,8554	0/0:29,0:29:81.28:0,81,5258	0/0:17,0:17:48.16:0,48,3075	0/0:31,0:31:90.30:0,90,5704	0/0:24,0:24:72.25:0,72,5078	0/0:22,0:22:66.23:0,66,4359	0/0:28,0:28:72.25:0,72,4918	0/0:18,0:18:54.19:0,54,3722
chr10	57313963	.	G	GT	1152.23	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.742;DP=666;FS=0.579;HRun=7;HaplotypeScore=72.9741;InbreedingCoeff=0.9761;MQ=71.94;MQ0=1;MQRankSum=-0.021;QD=19.53;ReadPosRankSum=-0.731;VQSLOD=3.0618;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,114,1100	1/1:3,5:8:9.86:137,10,0	0/0:29,0:26:57.27:0,57,597	0/0:21,0:19:38.53:0,39,393	0/0:26,0:26:57.05:0,57,540	0/0:25,0:24:54.08:0,54,521	0/0:31,0:30:78.12:0,78,753	1/1:17,9:27:40.25:482,40,0	0/0:20,0:20:54.08:0,54,521	0/0:22,0:22:60.04:0,60,567	0/0:13,0:13:27.04:0,27,260	0/0:22,0:22:63.10:0,63,608	0/0:21,0:21:54.07:0,54,516	0/0:21,0:21:63.09:0,63,603	0/0:18,0:18:51.08:0,51,492	0/0:21,0:21:54.08:0,54,521	1/1:7,17:24:59.67:672,60,0	0/0:32,0:32:90.14:0,90,869	0/0:26,0:25:50.26:0,50,466	0/0:19,0:19:39.04:0,39,371	0/0:39,0:39:96.15:0,96,926	0/0:22,0:22:45.06:0,45,434	0/0:15,0:16:44.09:0,44,406	0/0:48,0:47:99:0,129,1245	0/0:14,0:14:36.05:0,36,347	0/0:24,0:24:63.10:0,63,608	0/0:29,0:29:84.14:0,84,811	0/0:9,0:9:15.02:0,15,145
chr10	57314266	.	C	CA	4815.36	PASS	AC=50;AF=0.962;AN=52;BaseQRankSum=2.376;DP=196;FS=19.750;HRun=1;HaplotypeScore=67.1796;InbreedingCoeff=0.4741;MQ=39.89;MQ0=1;MQRankSum=-1.173;QD=26.75;ReadPosRankSum=1.760;VQSLOD=3.4747;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,8:10:21.06:247,21,0	1/1:0,3:3:9.03:108,9,0	0/0:9,0:3:8.29:0,8,48	./.	1/1:4,8:12:21.06:260,21,0	1/1:1,7:8:21.06:258,21,0	1/1:3,9:12:21.05:235,21,0	1/1:1,9:10:30.07:430,30,0	1/1:0,3:3:5.93:51,6,0	1/1:0,7:6:15.05:218,15,0	1/1:0,5:5:9.02:96,9,0	1/1:1,6:7:21.06:254,21,0	1/1:0,8:8:12.04:144,12,0	1/1:0,10:10:24.07:274,24,0	1/1:1,7:7:18.05:217,18,0	1/1:0,5:4:12.04:140,12,0	1/1:0,6:6:6.02:82,6,0	1/1:0,4:4:9.03:129,9,0	1/1:0,4:4:12.04:171,12,0	1/1:1,4:5:9.03:104,9,0	./.	1/1:1,13:13:27.07:302,27,0	1/1:0,10:10:22.30:232,22,0	1/1:0,5:4:9.03:112,9,0	1/1:0,4:4:12.04:139,12,0	1/1:2,8:10:27.09:389,27,0	1/1:0,5:5:12.04:146,12,0	1/1:0,4:4:6.02:77,6,0
chr10	57314269	.	TTGG	T	5029.23	PASS	AC=50;AF=0.962;AN=52;BaseQRankSum=2.253;DP=184;FS=13.774;HRun=0;HaplotypeScore=68.9788;InbreedingCoeff=0.4018;MQ=38.94;MQ0=0;MQRankSum=-0.285;QD=29.58;ReadPosRankSum=1.859;VQSLOD=4.1982;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,8:9:18.06:239,18,0	1/1:1,2:4:9.03:122,9,0	0/0:8,0:3:6:0,6,65	./.	1/1:2,7:10:18.03:211,18,0	1/1:1,7:8:18.04:242,18,0	1/1:2,9:11:18.06:245,18,0	1/1:0,9:9:27.09:474,27,0	1/1:0,3:3:5.99:62,6,0	1/1:1,6:6:15:214,15,0	1/1:0,5:5:9.01:98,9,0	1/1:1,5:7:21.06:276,21,0	1/1:0,8:8:12.04:168,12,0	1/1:0,10:10:24.08:319,24,0	1/1:2,5:7:18.04:222,18,0	1/1:1,4:4:12.04:163,12,0	1/1:1,1:2:3.01:39,3,0	1/1:0,4:4:9.03:150,9,0	1/1:0,4:4:12.04:198,12,0	1/1:0,4:4:9.03:121,9,0	./.	1/1:2,12:13:27.08:351,27,0	1/1:1,10:10:22.88:270,23,0	1/1:0,4:3:6.02:75,6,0	1/1:0,4:4:12.03:146,12,0	1/1:2,8:10:24.08:396,24,0	1/1:0,4:5:12.01:139,12,0	1/1:0,4:4:6.02:90,6,0
chr10	57314276	.	TG	T	4209.59	PASS	AC=52;AF=1.000;AN=52;DP=209;FS=0.000;HRun=2;HaplotypeScore=70.7503;InbreedingCoeff=-0.0259;MQ=35.50;MQ0=1;QD=20.84;VQSLOD=3.4567;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,12:12:20.98:198,21,0	1/1:1,5:6:9.02:88,9,0	./.	./.	1/1:0,8:8:12.01:113,12,0	1/1:1,7:8:21.04:208,21,0	1/1:0,12:12:23.97:226,24,0	1/1:0,14:14:42.05:479,42,0	1/1:0,5:5:8.81:78,9,0	1/1:1,7:7:14.56:147,15,0	1/1:0,10:10:15.03:153,15,0	1/1:3,5:8:21.01:200,21,0	1/1:0,9:9:12.03:124,12,0	1/1:1,10:10:24.04:239,24,0	1/1:0,6:6:17.98:168,18,0	1/1:2,4:6:18.01:177,18,0	1/1:0,1:1:3.01:30,3,0	1/1:1,4:5:12:126,12,0	1/1:0,4:4:12.03:138,12,0	1/1:1,4:5:11.96:107,12,0	1/1:0,4:4:2.94:18,3,0	1/1:0,15:13:27.04:263,27,0	1/1:0,12:11:26.89:234,27,0	1/1:0,4:3:6.01:59,6,0	1/1:0,7:7:9.02:89,9,0	1/1:0,11:11:33.07:360,33,0	1/1:0,6:6:12.02:123,12,0	1/1:1,4:4:6.01:64,6,0
chr10	57317045	.	CT	C	3125.32	PASS	AB=0.642;AC=29;AF=0.518;AN=56;BaseQRankSum=8.087;DP=505;FS=9.449;HRun=12;HaplotypeScore=57.8547;InbreedingCoeff=0.6513;MQ=73.01;MQ0=0;MQRankSum=-1.083;QD=9.99;ReadPosRankSum=2.565;VQSLOD=2.1233;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,1:32:36.63:106,37,0	1/1:0,7:7:14.93:116,15,0	0/0:11,0:11:8.75:0,9,71	0/0:10,0:10:10.90:0,11,65	1/1:3,0:22:13.47:68,13,0	0/0:16,0:17:38.86:0,39,363	0/0:10,1:11:0.81:0,1,190	1/1:6,5:11:11.89:93,12,0	1/1:2,17:21:45.91:337,46,0	0/1:13,15:28:8.10:301,0,8	1/1:3,10:14:31.90:238,32,0	0/0:21,1:22:28.72:0,29,450	0/0:12,0:12:24.03:0,24,234	0/0:14,0:14:33.04:0,33,319	1/1:2,10:13:19.96:145,20,0	0/0:12,1:14:3.63:0,4,197	1/1:6,23:29:20.36:341,20,0	0/0:17,1:19:24.63:0,25,395	1/1:2,10:13:1.47:184,1,0	0/1:12,10:22:14.02:176,0,14	1/1:8,15:25:39.59:290,40,0	0/0:17,1:18:15.75:0,16,307	0/0:8,1:10:0.74:0,1,165	0/0:33,0:34:83.92:0,84,815	0/1:5,12:17:47.99:153,0,48	1/1:5,15:22:39.88:290,40,0	1/1:8,19:28:46.67:354,47,0	1/1:2,7:9:17.93:139,18,0
chr10	57317478	.	C	CA	17930.43	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-4.187;DP=640;FS=0.624;HRun=1;HaplotypeScore=75.4275;InbreedingCoeff=0.9994;MQ=79.47;MQ0=0;MQRankSum=-0.283;QD=43.73;ReadPosRankSum=2.803;VQSLOD=4.9634;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,44:45:99:1916,120,0	1/1:0,8:8:21.07:336,21,0	0/0:20,0:20:54.17:0,54,730	0/0:19,0:19:55.78:0,56,669	1/1:0,17:17:48.16:767,48,0	0/0:22,0:22:66.21:0,66,905	0/0:28,0:28:81.27:0,81,1132	1/1:0,20:20:60.20:959,60,0	1/1:0,21:21:57.19:908,57,0	1/1:1,28:29:87.25:1344,87,0	1/1:0,15:15:45.15:719,45,0	0/0:25,0:25:75.24:0,75,1031	0/0:23,0:23:66.22:0,66,922	0/0:21,0:21:57.19:0,57,789	1/1:0,22:22:60.20:958,60,0	1/1:0,19:19:51.17:814,51,0	1/1:0,24:24:69.24:1102,69,0	1/1:1,31:32:87.30:1389,87,0	1/1:0,16:16:48.15:716,48,0	1/1:0,16:16:45.15:718,45,0	1/1:0,45:45:99:1869,117,0	0/0:16,0:16:48.14:0,48,652	0/0:20,0:20:60.19:0,60,820	0/0:36,0:36:99:0,105,1466	1/1:1,21:22:57.19:911,57,0	1/1:1,22:23:63.19:971,63,0	1/1:0,22:22:54.18:863,54,0	1/1:0,14:14:42.14:671,42,0
chr10	57318174	.	G	GA	390.34	PASS	AB=0.885;AC=5;AF=0.089;AN=56;BaseQRankSum=1.656;DP=565;FS=7.326;HRun=1;HaplotypeScore=86.0274;InbreedingCoeff=0.2858;MQ=61.22;MQ0=3;MQRankSum=2.042;QD=4.70;ReadPosRankSum=-1.967;VQSLOD=-0.5040;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:69.19:0,69,862	0/0:10,0:10:25.60:0,26,101	0/0:22,0:14:38.89:0,39,446	0/0:20,0:16:43.32:0,43,488	0/0:30,0:30:84.26:0,84,1073	0/0:13,0:13:33.11:0,33,427	0/0:10,0:10:30.08:0,30,375	0/1:32,0:32:19.02:19,0,137	0/0:12,0:12:30.55:0,31,115	0/1:18,0:18:13.47:13,0,108	0/0:22,0:22:24.86:0,25,178	0/0:19,0:19:57.13:0,57,695	0/0:21,0:21:60.16:0,60,747	0/0:19,0:19:54.16:0,54,687	0/0:19,0:19:48.20:0,48,181	0/1:9,10:19:19.63:263,0,20	0/0:27,0:27:40.49:0,40,233	1/1:6,8:14:7.18:209,7,0	0/0:21,0:21:17.05:0,17,138	0/0:21,0:21:53.39:0,53,199	0/0:18,0:18:21.38:0,21,157	0/0:10,0:10:27.07:0,27,325	0/0:14,0:14:42.12:0,42,530	0/0:27,0:27:81.17:0,81,986	0/0:16,0:16:34.91:0,35,129	0/0:27,0:27:12.61:0,13,172	0/0:30,0:30:78.73:0,79,338	0/0:29,0:29:70.26:0,70,302
chr10	57318176	.	G	GGAA	845.70	PASS	AB=0.855;AC=5;AF=0.089;AN=56;BaseQRankSum=1.938;DP=558;FS=0.615;HRun=0;HaplotypeScore=106.4346;InbreedingCoeff=-0.1036;MQ=61.67;MQ0=3;MQRankSum=-1.225;QD=7.42;ReadPosRankSum=-3.732;VQSLOD=1.9607;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:69.14:0,69,1125	0/0:10,0:10:29.74:0,30,220	0/0:21,0:15:44.63:0,45,632	0/0:20,0:16:39.05:0,39,552	0/0:30,0:30:87.27:0,87,1469	0/0:13,0:13:36.07:0,36,547	0/0:11,0:11:30.09:0,30,502	0/1:33,0:33:21.19:21,0,422	0/0:12,0:12:8.78:0,9,216	0/1:18,0:18:11.70:12,0,229	0/0:22,0:22:34.73:0,35,445	0/0:19,0:19:57.16:0,57,923	0/0:20,0:20:60.18:0,60,990	0/0:18,0:18:54.17:0,54,923	0/0:20,0:20:29.63:0,30,369	0/1:9,9:19:49.54:542,0,50	0/0:26,0:26:73.81:0,74,564	0/1:5,8:13:24.81:359,0,25	0/0:20,0:20:7.23:0,7,305	0/0:21,0:21:62.58:0,63,461	0/0:19,0:19:9.27:0,9,318	0/0:9,0:9:27.08:0,27,441	0/0:14,0:14:42.13:0,42,706	0/0:26,0:26:75.23:0,75,1267	0/0:14,0:14:41.64:0,42,300	0/0:25,0:25:47.32:0,47,491	0/0:30,0:30:89.45:0,89,707	0/1:31,0:31:27.17:27,0,500
chr10	57319720	.	G	GA	7061.32	PASS	AB=0.743;AC=35;AF=0.625;AN=56;BaseQRankSum=-6.996;DP=565;FS=4.182;HRun=11;HaplotypeScore=64.2740;InbreedingCoeff=0.5233;MQ=65.98;MQ0=1;MQRankSum=-0.557;QD=15.38;ReadPosRankSum=-1.764;VQSLOD=4.9884;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:5,23:27:24.86:433,25,0	1/1:2,8:12:26.72:241,27,0	0/1:21,1:16:4.55:5,0,58	0/0:8,0:8:5.95:0,6,46	1/1:8,24:33:48.25:646,48,0	0/0:10,0:11:25.94:0,26,192	0/1:15,1:16:3.59:4,0,159	0/1:11,15:24:7.35:322,0,7	0/1:4,13:18:5.32:349,0,5	1/1:5,18:24:53.94:532,54,0	1/1:6,13:20:18.60:335,19,0	0/0:20,1:27:38.40:0,38,398	0/1:12,3:15:0.56:1,0,179	0/0:10,0:10:14.64:0,15,132	1/1:4,17:23:11.16:361,11,0	0/1:7,8:16:23.41:159,0,23	1/1:9,30:44:4.87:755,5,0	1/1:4,21:26:56.01:584,56,0	1/1:8,21:30:60.06:591,60,0	1/1:2,13:16:5.93:275,6,0	1/1:6,11:19:38.72:354,39,0	0/0:13,0:13:29.86:0,30,232	0/0:16,0:17:37.77:0,38,284	0/0:20,0:20:41.73:0,42,317	0/1:3,11:15:15.06:78,0,15	1/1:7,12:19:36.07:366,36,0	1/1:8,21:30:30.04:519,30,0	1/1:1,5:6:15.03:152,15,0
chr10	57319939	.	A	AAG	8404.18	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-15.142;DP=551;FS=13.109;HRun=0;HaplotypeScore=89.8764;InbreedingCoeff=0.9727;MQ=72.14;MQ0=9;MQRankSum=3.821;QD=38.91;ReadPosRankSum=4.980;VQSLOD=6.4663;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:76.53:0,77,702	0/0:5,0:5:14.99:0,15,129	0/0:55,0:20:25.17:0,25,232	0/0:57,0:25:36.67:0,37,342	0/0:24,0:23:62.85:0,63,547	0/0:15,0:15:38.79:0,39,411	0/0:10,0:10:29.87:0,30,370	0/0:27,0:27:72.02:0,72,645	1/1:0,7:7:21.07:342,21,0	1/1:3,22:27:71.32:931,71,0	1/1:0,18:18:51.09:784,51,0	0/0:15,0:14:39.02:0,39,483	0/0:12,0:11:33.05:0,33,426	0/0:7,0:6:17.97:0,18,204	1/1:1,13:14:30.08:487,30,0	0/0:6,0:6:18.04:0,18,215	0/0:27,0:26:71.31:0,71,609	0/0:20,0:20:37.43:0,37,216	1/1:2,31:33:97.77:1371,98,0	1/1:2,25:27:71.99:1064,72,0	1/1:0,3:3:6.02:98,6,0	0/0:6,0:6:17.84:0,18,212	0/0:9,0:9:24.04:0,24,331	0/0:11,0:11:30.07:0,30,378	1/1:1,28:29:75.23:1217,75,0	1/1:0,14:15:45.07:615,45,0	1/1:0,21:22:57.19:921,57,0	1/1:3,13:19:11.46:575,11,0
chr10	57319975	.	C	CT	2067.82	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-4.547;DP=516;FS=3.746;HRun=9;HaplotypeScore=81.7796;InbreedingCoeff=0.9613;MQ=69.83;MQ0=6;MQRankSum=-0.120;QD=19.69;ReadPosRankSum=-1.939;VQSLOD=3.4676;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:10,16:27:24.88:473,25,0	1/1:0,9:9:24.06:265,24,0	0/0:35,0:18:16.53:0,17,134	0/0:34,0:15:10.82:0,11,119	1/1:6,12:18:36.05:373,36,0	0/0:20,0:20:47.96:0,48,412	0/0:11,0:12:26.02:0,26,214	1/1:9,19:28:51.14:564,51,0	0/0:10,0:10:23.99:0,24,208	0/0:19,0:19:44.98:0,45,388	0/0:15,0:15:38.99:0,39,338	0/0:13,0:11:23.99:0,24,208	0/0:10,0:10:17.97:0,18,156	0/0:8,0:8:20.99:0,21,182	0/0:16,0:16:32.99:0,33,286	0/0:8,0:8:20.99:0,21,182	1/1:8,14:23:53.96:567,54,0	0/0:22,0:22:16.36:0,16,290	0/0:24,1:23:20.79:0,21,405	0/0:28,0:28:44.74:0,45,548	0/0:4,0:4:8.99:0,9,78	0/0:10,0:10:29.99:0,30,258	0/0:11,0:11:29.98:0,30,260	0/0:12,0:12:35.98:0,36,308	0/0:31,1:31:71.96:0,72,625	0/0:12,0:12:29.99:0,30,260	0/0:36,0:35:83:0,83,709	0/0:17,0:17:14.98:0,15,130
chr10	57320347	.	CCA	C	2225.92	PASS	AB=0.841;AC=11;AF=0.196;AN=56;BaseQRankSum=6.060;DP=1000;FS=22.562;HRun=0;HaplotypeScore=233.1594;InbreedingCoeff=0.6701;MQ=57.67;MQ0=18;MQRankSum=-6.282;QD=9.43;ReadPosRankSum=-3.701;VQSLOD=1.5858;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:11,25:36:56.92:639,57,0	1/1:2,14:16:38.88:452,39,0	0/1:54,0:25:4.53:5,0,432	0/0:56,0:24:29.01:0,29,385	1/1:10,24:32:27.08:329,27,0	0/0:24,0:24:66.23:0,66,1071	0/1:31,4:36:0.20:0,0,1176	1/1:21,16:34:56.60:647,57,0	0/0:51,0:51:97.71:0,98,1767	0/0:52,0:50:99:0,126,2021	0/0:26,2:28:5.15:0,5,571	0/0:36,1:37:53.61:0,54,1325	0/0:36,0:36:88.18:0,88,1414	0/0:33,1:34:47.59:0,48,1243	0/0:38,0:38:84.27:0,84,1300	0/0:35,1:36:53.64:0,54,1354	0/1:9,11:20:14.44:318,0,14	0/0:12,0:12:33.11:0,33,527	0/0:28,1:29:2.35:0,2,678	0/0:37,0:37:84.24:0,84,1363	0/0:90,3:92:13.17:0,13,1832	0/0:38,0:38:87.16:0,87,1392	0/0:30,0:30:66.21:0,66,1043	0/0:41,0:40:99:0,105,1677	0/0:21,0:22:48.16:0,48,739	0/0:35,2:36:13.83:0,14,1123	0/0:21,0:21:48.16:0,48,759	0/0:10,0:10:24.08:0,24,349
chr10	57320368	.	CAT	C	3525.03	PASS	AB=0.991;AC=22;AF=0.393;AN=56;BaseQRankSum=17.081;DP=1107;FS=3.019;HRun=0;HaplotypeScore=316.3528;InbreedingCoeff=-0.0126;MQ=48.86;MQ0=32;MQRankSum=-2.776;QD=5.07;ReadPosRankSum=9.152;VQSLOD=1.4268;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:38,0:36:3.71:4,0,189	0/1:18,0:18:21.21:56,0,21	0/0:64,0:21:33.60:0,34,684	0/0:63,0:15:33.73:0,34,436	0/1:43,0:41:21.10:21,0,82	0/0:30,0:30:84.21:0,84,1508	0/0:40,0:40:91.49:0,91,1871	0/1:54,0:40:20.07:20,0,689	1/1:60,0:59:13.44:444,13,0	0/1:61,1:57:44.90:436,0,45	0/1:30,1:31:34.83:104,0,35	0/0:37,0:37:87.22:0,87,1782	0/0:34,0:34:98.85:0,99,1713	0/0:35,0:35:99:0,105,1897	1/1:49,0:47:5.62:322,6,0	0/1:32,0:32:52.76:351,0,53	0/1:18,1:19:2.62:48,0,3	1/1:11,0:11:4.04:124,4,0	0/1:24,0:20:56.43:112,0,56	1/1:44,0:44:7.39:244,7,0	0/1:104,0:99:59.71:420,0,60	0/0:38,0:38:93.93:0,94,1854	0/0:29,0:29:78.21:0,78,1421	0/0:42,0:41:99:0,114,2096	0/1:24,0:23:56.87:145,0,57	0/1:38,1:37:54.52:355,0,55	0/1:26,0:24:0.46:228,0,0	0/1:17,0:17:12.88:91,0,13
chr10	57320370	.	TAC	T	10589.38	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=9.720;DP=1099;FS=2.416;HRun=0;HaplotypeScore=299.5641;InbreedingCoeff=0.9753;MQ=48.11;MQ0=32;MQRankSum=-3.613;QD=20.64;ReadPosRankSum=4.470;VQSLOD=4.8906;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,1:37:30.12:0,30,191	0/0:3,0:17:6.59:0,7,72	0/0:59,1:19:23.89:0,24,539	0/0:63,0:15:21.07:0,21,335	0/0:24,0:46:17.14:0,17,112	0/0:29,0:29:75.24:0,75,1255	0/0:41,0:41:99:0,99,1626	0/0:29,0:40:79.88:0,80,634	1/1:17,42:58:99:1296,105,0	1/1:17,44:56:99:1588,120,0	1/1:11,20:31:30.10:382,30,0	0/0:37,0:37:96.31:0,96,1568	0/0:34,0:34:84.29:0,84,1398	0/0:34,0:34:96.33:0,96,1594	1/1:17,31:46:75.23:955,75,0	1/1:5,25:30:72.23:912,72,0	0/0:7,0:18:13.36:0,13,110	1/1:2,8:10:27.09:343,27,0	1/1:12,12:20:39.34:470,39,0	1/1:9,34:43:72.20:903,72,0	1/1:47,53:97:98.39:1244,98,0	0/0:37,1:38:56.42:0,56,1448	0/0:30,0:30:81.22:0,81,1296	0/0:44,0:43:99:0,111,1822	1/1:6,17:22:38.41:467,38,0	1/1:12,27:37:92.32:1096,92,0	1/1:5,21:25:55.71:676,56,0	1/1:8,9:17:10.26:258,10,0
chr10	57320400	.	TGC	T	107.54	PASS	AB=0.995;AC=6;AF=0.107;AN=56;BaseQRankSum=6.888;DP=1254;FS=10.816;HRun=0;HaplotypeScore=490.4980;InbreedingCoeff=0.4385;MQ=44.62;MQ0=24;MQRankSum=-3.318;QD=0.72;ReadPosRankSum=-2.900;VQSLOD=-0.2115;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:23,1:23:0.46:2,0,0	0/0:14,0:14:14.82:0,15,304	0/0:61,0:25:62.30:0,62,1246	0/0:47,0:17:48.15:0,48,869	0/0:55,0:55:1.32:0,1,60	0/0:30,0:30:85.08:0,85,1712	0/0:40,0:40:99:0,101,1968	0/0:64,0:53:99:0,155,2975	0/0:80,0:75:99:0,101,1962	0/0:81,0:74:99:0,186,3575	0/0:43,0:43:34.83:0,35,727	0/0:49,0:49:99:0,138,2735	0/0:26,0:26:78.25:0,78,1522	0/0:30,0:30:90.31:0,90,1791	0/0:88,0:79:83.68:0,84,1612	1/1:12,12:24:18.78:174,19,0	0/0:25,0:25:20.44:0,20,718	0/1:6,0:5:22.68:23,0,34	0/0:41,0:30:90.29:0,90,1641	0/0:59,0:59:61.23:0,61,1202	0/1:94,1:89:23.16:23,0,1207	0/0:33,0:33:89.61:0,90,1879	0/0:28,0:28:81.18:0,81,1636	0/0:43,0:42:99:0,108,2174	0/0:42,1:42:50.76:0,51,968	0/0:58,0:55:99:0,143,2906	0/0:42,0:40:96.10:0,96,1745	0/0:25,0:25:58.42:0,58,1016
chr10	57320416	.	TAC	T	727.17	PASS	AB=0.935;AC=7;AF=0.125;AN=56;BaseQRankSum=12.131;DP=1253;FS=30.159;HRun=0;HaplotypeScore=493.0127;InbreedingCoeff=-0.0640;MQ=44.04;MQ0=20;MQRankSum=-9.786;QD=1.93;ReadPosRankSum=3.962;VQSLOD=-0.4279;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:18:2.06:0,2,10	0/0:9,0:9:15.05:0,15,249	0/0:53,0:22:36.11:0,36,553	0/0:48,0:17:36.02:0,36,520	0/1:54,0:54:0.30:0,0,1	0/0:32,0:32:82.16:0,82,1307	0/0:37,0:37:84.28:0,84,1419	0/0:56,0:47:99:0,114,1873	0/0:78,0:73:16.98:0,17,829	0/1:82,0:74:99:389,0,1205	0/0:43,0:43:23.90:0,24,381	0/0:50,0:50:99:0,138,2297	0/0:25,0:25:63.20:0,63,1029	0/0:40,0:40:99:0,111,1861	0/0:89,0:80:25.85:0,26,686	0/0:19,1:20:1.41:0,1,66	0/0:27,1:28:15.17:0,15,824	0/1:2,3:4:12.63:84,0,13	0/0:41,0:33:2.06:0,2,718	0/0:60,0:60:15.51:0,16,459	0/1:95,8:99:99:141,0,986	0/0:32,0:32:78.16:0,78,1312	0/0:29,1:30:42.30:0,42,1273	0/0:45,0:45:99:0,111,1803	0/0:42,0:41:24.97:0,25,500	0/1:61,0:59:99:106,0,1361	0/1:46,0:44:99:114,0,510	0/1:24,0:24:14.22:14,0,571
chr10	57320424	.	CACAT	C	4753.93	PASS	AB=0.795;AC=12;AF=0.214;AN=56;BaseQRankSum=7.001;DP=1234;FS=20.736;HRun=0;HaplotypeScore=500.1122;InbreedingCoeff=-0.2139;MQ=42.75;MQ0=25;MQRankSum=-10.074;QD=7.03;ReadPosRankSum=0.260;VQSLOD=1.3883;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:14:2.02:0,2,10	0/0:8,0:8:14.94:0,15,206	0/0:55,0:18:43.54:0,44,767	0/0:49,0:17:45.13:0,45,976	0/1:48,5:53:0.20:0,0,1	0/0:29,0:29:77.92:0,78,1939	0/0:36,0:36:99:0,99,2514	0/0:57,0:42:99:0,113,2215	0/1:47,27:69:99:253,0,642	0/1:50,32:75:99:1611,0,1061	0/0:28,16:44:29.78:0,30,427	0/0:54,0:54:99:0,156,3903	0/0:25,0:25:75.11:0,75,1676	0/0:41,0:41:99:0,123,3106	0/1:58,31:80:99:158,0,620	0/1:15,2:17:22.93:23,0,50	0/0:31,0:31:51.11:0,51,826	0/0:6,0:6:14.69:0,15,102	0/1:31,4:28:99:388,0,586	0/1:31,26:57:99:155,0,369	0/1:93,8:95:99:124,0,886	0/0:31,0:31:89.06:0,89,2120	0/0:32,0:32:93.23:0,93,2230	0/0:45,0:45:99:0,117,2985	0/1:25,13:38:19.45:19,0,424	0/1:43,17:58:99:898,0,1294	0/1:23,22:43:99:828,0,513	0/1:20,5:25:99:296,0,511
chr10	57320432	.	TAC	T	10292.34	PASS	AB=0.722;AC=30;AF=0.536;AN=56;BaseQRankSum=14.556;DP=1221;FS=0.561;HRun=0;HaplotypeScore=448.2772;InbreedingCoeff=0.5910;MQ=42.71;MQ0=26;MQRankSum=-5.121;QD=12.43;ReadPosRankSum=-3.195;VQSLOD=3.4258;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:11,2:14:1.27:32,0,1	1/1:0,8:8:17.92:193,18,0	0/0:53,0:15:26.97:0,27,344	0/0:49,0:17:42.07:0,42,609	1/1:34,20:54:13.39:91,13,0	0/0:26,0:26:70.27:0,70,1196	0/0:36,0:36:93.28:0,93,1532	1/1:36,19:40:31.07:514,31,0	1/1:41,32:68:71.38:915,71,0	0/1:54,29:76:99:1210,0,134	1/1:22,23:45:50.50:521,50,0	0/0:53,0:53:99:0,147,2413	0/0:25,0:25:62.56:0,63,1004	0/0:42,0:42:99:0,117,1904	1/1:49,38:78:77.97:875,78,0	1/1:3,17:20:44.27:337,44,0	1/1:5,25:30:16.80:731,17,0	1/1:3,5:8:14.31:179,14,0	0/1:19,11:26:35.97:416,0,36	1/1:34,19:53:38.27:424,38,0	1/1:47,49:88:75.87:1142,76,0	0/0:31,0:31:82.03:0,82,1335	0/0:34,0:34:99:0,99,1597	0/0:44,0:44:99:0,111,1792	1/1:18,18:36:47.41:501,47,0	0/1:30,31:59:99:1047,0,103	0/1:23,22:44:28.04:612,0,28	0/1:12,15:27:26.29:552,0,26
chr10	57320460	.	TAC	T	1746.29	PASS	AB=0.898;AC=10;AF=0.179;AN=56;BaseQRankSum=7.409;DP=1284;FS=4.234;HRun=0;HaplotypeScore=446.5162;InbreedingCoeff=0.6930;MQ=47.21;MQ0=18;MQRankSum=-5.326;QD=8.05;ReadPosRankSum=-0.903;VQSLOD=2.5459;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,11:17:9.03:118,9,0	0/0:8,0:8:12.04:0,12,205	0/0:49,0:23:54.18:0,54,920	0/0:62,0:29:42.44:0,42,942	1/1:26,21:47:25.98:353,26,0	0/0:29,0:29:69.38:0,69,1227	0/0:38,0:38:99:0,99,1651	0/0:59,0:45:99:0,105,1626	0/0:74,10:79:94:0,94,2282	0/1:64,5:67:74.64:75,0,1753	0/0:41,4:45:71.53:0,72,1101	0/0:54,0:54:99:0,144,2357	0/0:30,0:30:87.30:0,87,1490	0/0:41,0:41:99:0,108,1851	0/0:75,12:78:99:0,102,1721	1/1:0,23:23:60.05:788,60,0	0/0:38,0:38:81.67:0,82,1491	1/1:4,12:16:4.11:434,4,0	0/0:27,1:24:24.44:0,24,989	0/0:38,10:48:63.09:0,63,1052	0/0:128,0:122:99:0,218,3247	0/0:30,0:30:84.17:0,84,1410	0/0:35,0:35:90.27:0,90,1473	0/0:50,0:50:99:0,132,2213	0/0:39,6:45:86.87:0,87,1325	0/0:49,1:49:67.76:0,68,1577	0/1:37,7:43:99:137,0,1235	0/0:27,1:28:41.69:0,42,809
chr10	57320514	.	TAC	T	12400.64	PASS	AB=0.561;AC=21;AF=0.375;AN=56;BaseQRankSum=12.800;DP=1137;FS=16.746;HRun=0;HaplotypeScore=224.8723;InbreedingCoeff=0.9198;MQ=51.45;MQ0=30;MQRankSum=3.647;QD=23.76;ReadPosRankSum=4.979;VQSLOD=3.8623;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:25:25.52:0,26,314	0/0:10,0:10:21.07:0,21,363	0/0:47,0:12:21.07:0,21,327	0/0:49,0:11:17.62:0,18,270	0/0:35,0:32:17.84:0,18,267	0/0:35,0:35:96.77:0,97,1608	0/0:24,0:24:66.21:0,66,1116	0/0:75,0:66:99:0,150,2354	1/1:11,48:60:99:1394,105,0	0/1:5,50:61:36.96:1582,0,37	1/1:6,22:29:69.01:889,69,0	0/0:41,0:41:99:0,108,1831	0/0:37,0:37:99:0,108,1858	0/0:42,0:42:99:0,117,2002	1/1:26,31:46:53.83:718,54,0	0/0:23,0:23:42.14:0,42,727	0/0:32,0:33:58.26:0,58,1216	0/0:27,0:26:75.26:0,75,1293	1/1:9,17:21:45.14:589,45,0	1/1:5,25:32:63.13:839,63,0	1/1:11,117:135:99:2984,181,0	0/0:30,0:30:78.25:0,78,1298	0/0:30,0:30:69.23:0,69,1187	0/0:52,0:52:99:0,135,2330	1/1:2,29:34:75.25:998,75,0	1/1:7,34:41:69.43:1210,69,0	1/1:3,26:29:63.21:838,63,0	1/1:3,10:12:27.09:359,27,0
chr10	57320528	.	TACACACATGCATAC	T	431.55	PASS	AB=0.889;AC=3;AF=0.054;AN=56;BaseQRankSum=3.390;DP=1112;FS=4.398;HRun=0;HaplotypeScore=461.2661;InbreedingCoeff=0.5262;MQ=51.98;MQ0=33;MQRankSum=-4.522;QD=7.19;ReadPosRankSum=-1.687;VQSLOD=0.4877;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:20,3:24:9.17:312,0,9	0/0:9,0:9:18.06:0,18,940	0/0:34,0:8:6.02:0,6,153	0/0:44,0:10:9.75:0,10,290	1/1:9,27:33:5.41:213,5,0	0/0:34,0:35:78.32:0,78,3805	0/0:23,0:23:51.18:0,51,1981	0/0:58,0:53:81.26:0,81,2280	0/0:55,0:55:81.24:0,81,3168	0/0:71,0:68:76.77:0,77,4303	0/0:30,0:30:57.09:0,57,2587	0/0:36,0:36:72.25:0,72,3884	0/0:39,0:39:75.26:0,75,3214	0/0:38,0:38:81.26:0,81,3987	0/0:57,0:46:45.04:0,45,1830	0/0:20,0:20:33.11:0,33,1439	0/0:29,0:29:61.81:0,62,2563	0/0:29,0:28:69.24:0,69,2960	0/0:25,0:20:29.19:0,29,1166	0/0:33,0:33:66.03:0,66,3013	0/0:139,0:138:99:0,161,8232	0/0:26,0:26:54.17:0,54,2486	0/0:34,0:34:72.14:0,72,2851	0/0:61,0:61:99:0,114,5070	0/0:34,0:34:51.17:0,51,2082	0/0:43,0:42:99:0,99,4330	0/0:32,0:32:72.65:0,73,2832	0/0:17,0:16:39.13:0,39,1382
chr10	57320602	.	AATAG	A	3575.60	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.394;DP=891;FS=0.475;HRun=0;HaplotypeScore=170.7321;InbreedingCoeff=0.9985;MQ=64.56;MQ0=1;MQRankSum=-4.246;QD=43.60;ReadPosRankSum=-0.891;VQSLOD=3.7475;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:19:45.15:0,45,1161	1/1:0,9:9:21.07:386,21,0	0/0:33,0:32:75.23:0,75,1466	0/0:43,0:41:99:0,99,2136	0/0:33,0:33:57.11:0,57,1326	0/0:23,0:23:66.23:0,66,1690	0/0:15,0:15:42.12:0,42,928	1/1:5,34:39:99:1748,102,0	0/0:36,0:36:93.32:0,93,2293	0/0:56,0:52:99:0,138,3315	0/0:26,0:26:69.19:0,69,1593	0/0:47,0:47:99:0,123,2914	0/0:26,0:26:75.23:0,75,1728	0/0:34,0:34:87.22:0,87,1973	0/0:50,0:43:99:0,114,2695	0/0:27,0:27:75.26:0,75,1947	1/1:11,23:34:90.17:1441,90,0	0/0:18,0:18:51.15:0,51,1264	0/0:23,0:23:60.17:0,60,1349	0/0:31,0:31:90.27:0,90,2108	0/0:55,0:55:99:0,138,3294	0/0:29,0:29:84.22:0,84,1972	0/0:35,0:35:96.27:0,96,2183	0/0:37,0:37:93.31:0,93,2277	0/0:19,0:19:45.15:0,45,1109	0/0:38,0:38:99:0,108,2430	0/0:36,0:35:90.29:0,90,2156	0/0:19,0:18:54.19:0,54,1379
chr10	57321847	.	G	GTA	4651.99	PASS	AB=0.588;AC=13;AF=0.232;AN=56;BaseQRankSum=-5.106;DP=608;FS=6.953;HRun=0;HaplotypeScore=74.5709;InbreedingCoeff=0.8557;MQ=69.04;MQ0=1;MQRankSum=1.324;QD=28.89;ReadPosRankSum=-1.949;VQSLOD=5.5645;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:29:57.43:402,57,0	1/1:1,9:10:24.08:396,24,0	0/0:14,0:14:15.05:0,15,185	0/0:9,0:8:15.01:0,15,158	1/1:26,0:26:47.47:314,47,0	0/0:22,0:22:51.16:0,51,638	0/0:15,0:15:30.09:0,30,375	1/1:8,26:35:81.25:1262,81,0	0/0:18,0:18:42.12:0,42,512	0/0:25,0:25:63.17:0,63,762	0/0:26,0:26:63.19:0,63,775	0/0:16,0:16:45.13:0,45,548	0/0:25,0:25:66.19:0,66,813	0/0:24,0:24:63.20:0,63,788	0/0:23,0:23:63.18:0,63,773	0/1:6,14:20:98.97:593,0,99	1/1:1,25:27:66.23:1090,66,0	1/1:2,12:13:36.12:594,36,0	0/0:15,0:15:39.12:0,39,478	0/0:40,0:41:99:0,102,1251	0/0:28,0:28:75.21:0,75,911	0/0:23,0:23:63.20:0,63,787	0/0:19,0:19:45.14:0,45,562	0/0:15,0:15:33.11:0,33,413	0/0:22,0:22:51.16:0,51,638	0/0:36,0:36:75.23:0,75,927	0/0:20,1:21:1.61:0,2,538	0/0:10,0:10:30.10:0,30,375
chr10	57321857	.	A	ATATG	2872.79	PASS	AB=1.000;AC=10;AF=0.179;AN=56;BaseQRankSum=6.807;DP=603;FS=4.681;HRun=0;HaplotypeScore=103.4895;InbreedingCoeff=0.5844;MQ=67.88;MQ0=1;MQRankSum=-0.556;QD=17.31;ReadPosRankSum=0.203;VQSLOD=3.1655;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,29:34:63.17:1544,63,0	1/1:9,0:9:12.44:30,12,0	0/0:13,0:13:29.94:0,30,357	0/0:8,0:7:17.98:0,18,228	1/1:2,25:27:48.16:1238,48,0	0/0:26,0:26:69.14:0,69,1054	0/0:16,0:16:36.08:0,36,554	0/1:35,0:35:73.66:139,0,74	0/0:16,0:16:42.13:0,42,708	0/0:28,0:28:66.18:0,66,1040	0/0:23,0:23:63.20:0,63,1082	0/0:16,0:16:39.13:0,39,694	0/0:25,0:25:66.21:0,66,1143	0/0:23,0:23:60.19:0,60,1035	0/0:23,0:23:57.17:0,57,949	0/1:19,0:19:16.63:17,0,176	0/1:28,0:28:7.71:43,0,8	0/1:14,0:13:2.30:23,0,2	0/0:16,0:16:39.08:0,39,531	0/0:38,0:38:96.30:0,96,1620	0/0:25,0:25:72.25:0,72,1275	0/0:25,0:25:63.17:0,63,1018	0/0:17,0:17:45.12:0,45,743	0/0:18,0:18:54.07:0,54,757	0/0:20,0:20:57.16:0,57,926	0/0:28,0:28:69.22:0,69,1172	0/0:19,0:19:51.91:0,52,874	0/0:14,0:14:36.05:0,36,523
chr10	57323557	.	CGTGTGT	C	524.18	PASS	AC=18;AF=0.375;AN=48;BaseQRankSum=3.619;DP=584;FS=14.466;HRun=0;HaplotypeScore=120.7100;InbreedingCoeff=0.6564;MQ=67.58;MQ0=12;MQRankSum=-2.110;QD=2.61;ReadPosRankSum=0.004;VQSLOD=1.7280;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:23,1:31:1.35:2,1,0	0/0:10,0:10:9.03:0,9,232	./.	0/0:27,0:19:1.25:0,1,3	0/0:17,1:19:0.03:0,0,0	0/0:18,0:18:33.02:0,33,921	0/0:32,0:32:30.57:0,31,859	0/0:22,0:20:9:0,9,123	1/1:17,4:21:3.01:61,3,0	1/1:23,3:26:5.34:120,5,0	1/1:6,2:8:3.01:37,3,0	0/0:15,0:15:21.07:0,21,522	0/0:22,0:23:24.04:0,24,481	0/0:16,0:17:27.09:0,27,698	1/1:17,7:25:15.05:285,15,0	0/0:18,0:19:27.09:0,27,660	0/0:24,0:23:21.07:0,21,523	0/0:7,0:10:12.04:0,12,243	1/1:19,0:18:0.99:49,1,0	1/1:17,0:17:3.01:51,3,0	1/1:39,1:40:3:36,3,0	0/0:19,0:19:27.09:0,27,743	0/0:11,0:11:9.03:0,9,290	0/0:37,0:37:75.24:0,75,2009	./.	./.	1/1:14,0:14:3.01:31,3,0	./.
chr10	57323602	.	GT	G	316.14	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=3.926;DP=527;FS=0.000;HRun=1;HaplotypeScore=70.6042;InbreedingCoeff=0.8970;MQ=58.61;MQ0=17;MQRankSum=-1.128;QD=5.85;ReadPosRankSum=0.112;VQSLOD=0.1738;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:53.29:0,53,681	1/1:10,0:8:11.96:100,12,0	0/0:28,0:12:33.10:0,33,429	0/0:41,0:22:63.01:0,63,760	0/0:15,0:15:32.26:0,32,386	0/0:22,0:22:63.18:0,63,877	0/0:24,0:24:63.17:0,63,868	1/1:2,16:10:24.08:325,24,0	0/0:14,0:14:32.58:0,33,399	0/0:16,0:16:47.13:0,47,583	0/0:5,0:5:9.03:0,9,122	0/0:15,0:15:42.14:0,42,576	0/0:15,0:14:35.69:0,36,447	0/0:18,0:18:47.63:0,48,624	0/0:22,0:21:45.57:0,46,474	0/0:17,0:17:48.14:0,48,645	1/1:24,2:21:8.49:21,8,0	0/0:11,0:10:26.75:0,27,314	0/0:12,0:12:36.12:0,36,487	0/0:15,0:15:29.83:0,30,402	0/0:37,0:37:59.90:0,60,789	0/0:22,0:22:63.20:0,63,859	0/0:14,0:14:42.14:0,42,590	0/0:43,0:42:99:0,104,1462	0/0:14,0:14:24.08:0,24,324	0/0:14,0:14:42.14:0,42,567	0/0:4,0:4:12.04:0,12,161	0/0:5,0:5:6.02:0,6,82
chr10	57323603	.	T	TGTG	738.80	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=0.962;DP=522;FS=0.000;HRun=0;HaplotypeScore=88.9452;InbreedingCoeff=0.9178;MQ=59.09;MQ0=16;MQRankSum=-1.344;QD=14.78;ReadPosRankSum=-0.309;VQSLOD=3.0151;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:54.16:0,54,713	1/1:0,0:7:15.05:252,15,0	0/0:29,0:13:33.58:0,34,433	0/0:41,0:22:63.18:0,63,794	0/0:16,0:16:33.11:0,33,444	0/0:22,0:22:63.11:0,63,891	0/0:23,0:23:63.17:0,63,918	1/1:16,0:10:24.08:325,24,0	0/0:14,0:14:33.10:0,33,428	0/0:17,0:17:48.16:0,48,641	0/0:5,0:5:9.03:0,9,122	0/0:15,0:15:42.14:0,42,598	0/0:15,0:14:33.11:0,33,459	0/0:17,0:17:48.15:0,48,677	0/0:22,0:21:48.14:0,48,616	0/0:18,0:18:40.17:0,40,552	1/1:3,14:19:17.85:300,18,0	0/0:9,0:9:15.17:0,15,240	0/0:12,0:12:36.12:0,36,490	0/0:15,0:15:30.10:0,30,408	0/0:38,0:38:60.10:0,60,795	0/0:21,0:21:63.19:0,63,846	0/0:14,0:14:42.14:0,42,616	0/0:39,0:39:99:0,104,1575	0/0:14,0:14:24.08:0,24,326	0/0:14,0:14:42.14:0,42,571	0/0:4,0:4:12.04:0,12,162	0/0:8,0:8:5.86:0,6,82
chr10	57323700	.	AAACAACAAAACAC	A	20473.04	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=16.183;DP=664;FS=8.375;HRun=0;HaplotypeScore=263.3076;InbreedingCoeff=0.9914;MQ=82.70;MQ0=0;MQRankSum=-14.975;QD=58.83;ReadPosRankSum=0.163;VQSLOD=2.6753;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,25:34:36.12:1344,36,0	1/1:2,11:13:21.02:825,21,0	0/0:43,0:42:99:0,111,5103	0/0:40,0:39:94.48:0,94,4315	1/1:3,29:32:71.47:1726,71,0	0/0:21,0:21:60.21:0,60,3832	0/0:26,0:26:72.25:0,72,4293	1/1:7,13:20:32.95:784,33,0	1/1:7,19:26:45.15:1711,45,0	1/1:7,15:22:42.02:1358,42,0	1/1:0,19:19:36.08:1256,36,0	0/0:21,0:21:60.21:0,60,3453	0/0:20,0:20:57.20:0,57,3190	0/0:27,0:27:75.24:0,75,4330	1/1:3,16:19:36.12:1414,36,0	0/0:23,0:23:66.23:0,66,3387	1/1:4,4:8:15.05:584,15,0	0/0:20,0:19:29.18:0,29,2381	1/1:10,12:22:36.09:1180,36,0	1/1:1,23:24:56.90:1399,57,0	1/1:6,12:18:11.91:345,12,0	0/0:31,0:31:87.28:0,87,4764	0/0:14,0:14:42.14:0,42,2618	0/0:30,0:30:87.30:0,87,5393	1/1:2,16:18:30.10:1111,30,0	1/1:8,33:41:72.91:2974,73,0	1/1:2,19:21:45.15:1768,45,0	1/1:1,10:11:18.06:694,18,0
chr10	57324402	.	C	CT	1526.19	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=1.642;DP=476;FS=17.987;HRun=9;HaplotypeScore=51.5731;InbreedingCoeff=0.8209;MQ=69.24;MQ0=2;MQRankSum=-0.153;QD=17.15;ReadPosRankSum=2.169;VQSLOD=2.3880;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,26:29:60.16:664,60,0	0/0:5,0:6:11.03:0,11,84	0/1:11,0:10:0.65:1,0,134	0/0:12,0:8:11.99:0,12,104	1/1:8,11:19:24.06:261,24,0	0/0:13,0:13:29.97:0,30,256	0/0:17,0:17:38.98:0,39,339	0/0:30,0:29:74.97:0,75,647	0/0:11,0:10:23.99:0,24,208	0/0:23,2:25:26.80:0,27,462	0/0:15,1:16:5.89:0,6,279	0/0:17,0:17:35.98:0,36,312	0/0:11,0:11:26.98:0,27,234	0/0:14,0:14:32.99:0,33,286	0/0:17,0:17:29.96:0,30,260	1/1:1,11:13:3.87:254,4,0	0/0:47,1:48:95.77:0,96,1059	1/1:0,17:17:45.12:498,45,0	0/0:34,0:32:79.93:0,80,671	0/0:8,0:9:11.97:0,12,104	0/0:13,0:13:26.98:0,27,231	0/0:12,0:12:22.80:0,23,188	0/0:9,0:9:23.99:0,24,208	0/0:9,0:8:11.99:0,12,104	0/0:21,0:21:47.98:0,48,417	0/0:12,0:11:29.99:0,30,260	0/0:19,0:19:50.99:0,51,442	0/0:11,0:11:20.90:0,21,182
chr10	57324775	.	A	ACACT	4039.95	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.431;DP=676;FS=2.566;HRun=0;HaplotypeScore=112.4307;InbreedingCoeff=0.9985;MQ=85.10;MQ0=0;MQRankSum=-5.663;QD=56.11;ReadPosRankSum=2.934;VQSLOD=4.9742;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,48:54:99:2910,108,0	0/0:10,0:10:30.10:0,30,569	0/0:24,0:24:63.18:0,63,1068	0/0:22,0:22:50.34:0,50,959	1/1:3,15:18:42.14:1130,42,0	0/0:31,0:30:93.28:0,93,1687	0/0:20,0:20:57.20:0,57,1073	0/0:32,0:32:90.26:0,90,1536	0/0:30,0:30:81.25:0,81,1464	0/0:22,0:22:66.22:0,66,1224	0/0:12,0:12:27.08:0,27,480	0/0:22,0:22:63.19:0,63,1130	0/0:24,0:24:69.22:0,69,1275	0/0:22,0:22:66.23:0,66,1251	0/0:26,0:26:66.14:0,66,1076	0/0:26,0:26:72.23:0,72,1332	0/0:34,0:34:81.23:0,81,1468	0/0:27,0:27:81.26:0,81,1503	0/0:23,0:23:57.16:0,57,976	0/0:13,0:13:39.13:0,39,740	0/0:47,0:47:99:0,135,2473	0/0:17,0:17:48.15:0,48,879	0/0:10,0:10:27.09:0,27,512	0/0:31,0:31:90.31:0,90,1679	0/0:21,0:21:63.20:0,63,1162	0/0:19,0:19:54.19:0,54,1025	0/0:23,0:23:63.18:0,63,1128	0/0:16,0:16:33.11:0,33,606
chr10	57326823	.	C	CAAAAT	1161.29	PASS	AB=0.667;AC=7;AF=0.125;AN=56;BaseQRankSum=-2.143;DP=238;FS=16.422;HRun=0;HaplotypeScore=57.6300;InbreedingCoeff=0.7081;MQ=52.80;MQ0=0;MQRankSum=-2.776;QD=36.29;ReadPosRankSum=0.444;VQSLOD=1.9811;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,8:12:18.06:518,18,0	0/0:10,0:10:21.07:0,21,397	0/0:4,0:3:6.02:0,6,110	0/0:11,0:7:16.15:0,16,196	1/1:5,5:10:13.20:251,13,0	0/0:7,0:7:18.06:0,18,340	0/0:9,0:9:24.08:0,24,454	0/0:15,0:15:39.12:0,39,691	0/0:5,0:5:6.02:0,6,113	0/0:10,0:10:24.08:0,24,408	0/0:11,0:11:15.05:0,15,260	0/0:10,0:10:24.01:0,24,411	0/0:1,0:1:3.01:0,3,57	0/0:5,0:5:12.04:0,12,208	0/0:9,0:9:18.06:0,18,340	1/1:1,3:4:9.03:260,9,0	0/0:14,0:14:30.10:0,30,567	0/1:3,3:6:0.27:271,0,0	0/0:15,0:15:24.08:0,24,436	0/0:16,0:16:30.10:0,30,545	0/0:5,0:5:9.03:0,9,162	0/0:9,0:9:15.05:0,15,263	0/0:7,0:7:9.03:0,9,170	0/0:5,0:5:12.04:0,12,227	0/0:10,0:10:15.05:0,15,283	0/0:8,0:7:18.06:0,18,338	0/0:8,0:8:18.06:0,18,304	0/0:2,0:2:6.02:0,6,113
chr10	57327318	.	T	TTGG	5316.33	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-6.010;DP=584;FS=5.622;HRun=0;HaplotypeScore=99.8530;InbreedingCoeff=0.9910;MQ=71.97;MQ0=0;MQRankSum=-3.615;QD=54.81;ReadPosRankSum=1.321;VQSLOD=6.6926;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,38:41:99:2610,117,0	0/0:4,0:4:12.04:0,12,205	0/0:14,0:14:39.13:0,39,650	0/0:15,0:15:39.11:0,39,597	1/1:7,20:28:51.16:1159,51,0	0/0:20,0:19:48.16:0,48,818	0/0:22,0:22:63.17:0,63,1004	0/0:39,0:39:99:0,111,1811	0/0:21,0:21:57.19:0,57,933	0/0:21,0:21:57.20:0,57,971	0/0:17,0:17:48.12:0,48,787	0/0:18,0:18:54.15:0,54,841	0/0:22,0:22:57.18:0,57,934	0/0:19,0:19:57.19:0,57,960	0/0:22,0:22:63.21:0,63,1027	1/1:2,11:13:39.09:836,39,0	0/0:29,0:28:81.25:0,81,1326	1/1:3,12:15:33.08:710,33,0	0/0:23,0:23:69.24:0,69,1170	0/0:12,0:12:33.11:0,33,537	0/0:31,0:31:81.25:0,81,1351	0/0:16,0:16:42.14:0,42,715	0/0:15,0:15:30.10:0,30,506	0/0:22,0:22:48.08:0,48,756	0/0:13,0:12:33.11:0,33,563	0/0:23,0:23:66.22:0,66,1101	0/0:15,0:14:33.11:0,33,562	0/0:34,0:34:96.33:0,96,1626
chr10	57328078	.	CA	C	9523.58	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=9.619;DP=572;FS=6.110;HRun=8;HaplotypeScore=60.6896;InbreedingCoeff=0.9794;MQ=80.41;MQ0=1;MQRankSum=-2.713;QD=24.80;ReadPosRankSum=2.028;VQSLOD=5.7909;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,41:47:99:1159,120,0	1/1:0,12:12:30.05:290,30,0	0/0:27,0:25:26.85:0,27,459	0/0:12,0:12:6.08:0,6,181	1/1:1,21:22:51.07:493,51,0	0/0:13,0:13:39.12:0,39,471	0/0:22,0:22:57.17:0,57,688	1/1:3,15:18:45.07:435,45,0	1/1:2,24:26:72.11:695,72,0	1/1:1,19:20:57.09:550,57,0	1/1:1,18:19:11.83:398,12,0	0/0:19,0:19:45.13:0,45,532	0/0:16,0:16:48.14:0,48,568	0/0:16,0:16:45.14:0,45,544	1/1:1,20:21:48.08:464,48,0	1/1:0,20:20:60.10:579,60,0	1/1:3,21:24:57.09:550,57,0	1/1:2,17:19:42.07:406,42,0	1/1:3,20:23:60.09:579,60,0	1/1:1,33:34:90.14:869,90,0	1/1:1,18:19:51.08:493,51,0	0/0:17,0:17:45.13:0,45,534	0/0:24,0:24:63.18:0,63,750	0/0:21,0:21:60.14:0,60,708	1/1:1,11:12:30.05:290,30,0	1/1:0,19:19:57.09:551,57,0	1/1:1,15:16:42.07:406,42,0	1/1:1,12:13:33.05:319,33,0
chr10	57328274	.	T	TG	12492.93	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-13.633;DP=645;FS=5.659;HRun=5;HaplotypeScore=66.0748;InbreedingCoeff=0.9887;MQ=72.24;MQ0=0;MQRankSum=-2.762;QD=30.25;ReadPosRankSum=1.718;VQSLOD=5.6062;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,30:32:71.94:947,72,0	1/1:1,8:9:27.08:341,27,0	0/0:25,0:24:30.03:0,30,505	0/0:23,0:22:48:0,48,487	1/1:0,19:19:51.17:670,51,0	0/0:13,0:13:39.10:0,39,419	0/0:23,0:23:63.12:0,63,662	1/1:3,22:25:57.12:699,57,0	1/1:2,29:31:75.72:988,76,0	1/1:5,20:25:60.20:789,60,0	1/1:2,8:10:15.05:197,15,0	0/0:27,0:27:52.69:0,53,692	0/0:34,0:34:87.21:0,87,932	0/0:26,0:26:69.17:0,69,741	1/1:3,32:35:78.25:1026,78,0	1/1:0,28:28:63.20:827,63,0	1/1:5,15:20:42.12:536,42,0	1/1:0,20:20:41.99:552,42,0	1/1:1,23:24:72.19:924,72,0	1/1:2,21:23:51.04:671,51,0	1/1:6,33:39:81.26:1059,81,0	0/0:18,0:18:48.11:0,48,509	0/0:26,0:26:69.16:0,69,732	0/0:16,0:16:36.04:0,36,373	1/1:1,13:14:36.12:473,36,0	1/1:2,21:23:63.19:810,63,0	1/1:6,25:31:69.21:891,69,0	1/1:3,1:4:9:92,9,0
chr10	57329816	.	C	CTTTT	2435.40	PASS	AB=0.796;AC=8;AF=0.143;AN=56;BaseQRankSum=-1.721;DP=480;FS=0.000;HRun=9;HaplotypeScore=84.7605;InbreedingCoeff=0.8070;MQ=54.70;MQ0=9;MQRankSum=-5.338;QD=29.34;ReadPosRankSum=-1.577;VQSLOD=1.2503;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,12:18:36.08:714,36,0	0/0:10,0:10:27.08:0,27,375	0/1:5,0:2:0:0,0,0	0/0:7,0:3:9.03:0,9,123	1/1:12,12:25:33.58:689,34,0	0/0:14,0:14:39.12:0,39,570	0/0:19,0:19:42.03:0,42,563	0/0:34,0:31:51.07:0,51,741	0/0:16,0:16:39.11:0,39,555	0/0:21,0:21:60.19:0,60,863	0/0:13,0:13:29.97:0,30,410	0/0:16,0:16:42.10:0,42,607	0/0:8,0:8:18.04:0,18,244	0/0:13,0:13:33.11:0,33,472	0/0:12,0:12:30.06:0,30,419	0/1:5,11:15:7.76:708,0,8	0/0:31,0:29:44.44:0,44,981	1/1:5,8:12:21.07:471,21,0	0/0:20,0:19:42.11:0,42,614	0/0:27,0:27:60.10:0,60,852	0/0:21,0:20:51.14:0,51,745	0/0:9,0:9:14.98:0,15,219	0/0:15,0:14:30.03:0,30,417	0/0:12,0:11:27.06:0,27,392	0/0:25,0:26:70.46:0,70,1010	0/0:22,0:22:61.43:0,61,863	0/0:17,0:18:42.08:0,42,594	0/0:12,0:12:33.07:0,33,459
chr10	57329830	.	C	CT	1274.18	PASS	AC=6;AF=0.111;AN=54;BaseQRankSum=-5.317;DP=463;FS=3.004;HRun=7;HaplotypeScore=58.5433;InbreedingCoeff=0.9438;MQ=53.44;MQ0=13;MQRankSum=0.137;QD=20.23;ReadPosRankSum=0.510;VQSLOD=3.1718;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:20:42.37:0,42,427	1/1:0,10:10:24.07:290,24,0	./.	0/0:2,0:3:4.61:0,5,18	0/0:21,0:21:45.05:0,45,428	0/0:14,0:14:39.03:0,39,369	0/0:16,0:16:36.05:0,36,347	1/1:13,9:18:24.07:290,24,0	0/0:11,0:11:30.02:0,30,282	0/0:25,0:25:66.10:0,66,637	0/0:15,0:15:30.04:0,30,290	0/0:17,0:17:45.07:0,45,434	0/0:9,0:9:21.03:0,21,203	0/0:13,0:13:30.01:0,30,277	0/0:13,0:13:33.04:0,33,313	0/0:18,0:17:23.25:0,23,225	1/1:7,24:29:46.26:835,46,0	0/0:16,0:13:17.91:0,18,163	0/0:22,0:18:36.04:0,36,342	0/0:22,0:22:57.08:0,57,545	0/0:19,0:18:51.07:0,51,487	0/0:8,0:8:18.03:0,18,174	0/0:16,0:14:33.05:0,33,318	0/0:13,0:12:27.04:0,27,261	0/0:24,0:24:54.08:0,54,521	0/0:21,0:19:45.07:0,45,434	0/0:24,0:24:63.09:0,63,606	0/0:12,0:12:30.05:0,30,290
chr10	57331069	.	T	TG	828.71	PASS	AB=0.938;AC=7;AF=0.125;AN=56;BaseQRankSum=-0.174;DP=682;FS=27.419;HRun=0;HaplotypeScore=76.1354;InbreedingCoeff=-0.1288;MQ=38.68;MQ0=186;MQRankSum=3.013;QD=4.04;ReadPosRankSum=2.397;VQSLOD=1.4006;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:37,0:23:14.92:121,0,15	0/1:8,0:7:16.47:28,0,16	0/0:38,0:10:16.50:0,16,153	0/0:34,0:4:7.60:0,8,31	0/1:7,15:19:14.96:162,0,15	0/0:16,0:10:28.36:0,28,220	0/0:18,0:9:22.93:0,23,164	0/1:35,0:27:52.07:251,0,52	0/0:18,0:16:44.27:0,44,334	0/0:32,0:18:48.45:0,48,380	0/0:19,0:17:47.45:0,47,378	0/0:10,0:7:17.04:0,17,98	0/0:10,0:9:25.16:0,25,157	0/0:18,0:11:24.47:0,24,182	0/0:12,0:10:28.46:0,28,209	0/1:24,0:19:55.53:135,0,56	0/1:34,1:19:72.93:107,0,73	0/1:44,0:25:58.31:155,0,58	0/0:62,0:35:97.92:0,98,804	0/0:27,0:20:44.34:0,44,339	0/0:20,0:10:22.34:0,22,170	0/0:8,0:3:7.16:0,7,41	0/0:10,0:7:20.79:0,21,156	0/0:17,0:7:14.91:0,15,121	0/0:24,0:20:44.43:0,44,393	0/0:36,0:24:64.07:0,64,493	0/0:28,0:19:58.52:0,59,423	0/0:20,0:7:17.71:0,18,137
chr10	57331805	.	TGG	T	1736.71	PASS	AB=0.863;AC=28;AF=0.500;AN=56;BaseQRankSum=0.207;DP=572;FS=0.544;HRun=13;HaplotypeScore=95.1456;InbreedingCoeff=0.1632;MQ=84.50;MQ0=3;MQRankSum=-1.277;QD=4.15;ReadPosRankSum=3.363;VQSLOD=-0.4824;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:23,15:40:26.10:229,26,0	1/1:2,2:5:8.74:70,9,0	0/0:41,0:29:21.93:0,22,499	0/1:20,0:16:16.43:16,0,125	1/1:10,10:21:29.66:257,30,0	0/1:7,0:7:1.78:2,0,18	0/0:25,0:27:38.95:0,39,473	1/1:10,7:20:24.92:207,25,0	0/1:15,1:28:14.67:41,0,15	0/1:15,3:21:1.19:55,0,1	0/0:4,0:7:3.26:0,3,10	0/1:13,0:13:19.49:19,0,59	0/0:21,0:21:15.03:0,15,186	0/0:12,0:14:9.73:0,10,156	0/1:15,3:21:2.23:65,0,2	1/1:11,13:26:23.48:196,23,0	1/1:17,19:40:41.20:344,41,0	1/1:4,0:19:32.84:142,33,0	0/1:13,4:19:53.53:60,0,54	0/1:9,2:11:33.57:45,0,34	0/1:29,1:33:35.52:36,0,96	0/1:14,1:15:16.74:17,0,77	0/0:7,0:8:6.02:0,6,86	0/0:20,1:21:2.95:0,3,266	0/0:11,0:15:2.29:0,2,5	1/1:15,1:20:11.81:101,12,0	0/1:18,1:21:7.11:7,0,99	0/1:12,0:13:3.29:3,0,15
chr10	57332879	.	A	ATGATGG	10662.07	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-10.285;DP=696;FS=1.354;HRun=0;HaplotypeScore=129.7355;InbreedingCoeff=0.9124;MQ=69.96;MQ0=7;MQRankSum=-10.781;QD=33.01;ReadPosRankSum=-3.733;VQSLOD=4.1161;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:66.19:0,66,1281	1/1:8,5:14:15.01:381,15,0	0/0:35,0:30:3.67:0,4,92	0/0:24,0:22:9.87:0,10,184	0/0:38,0:38:54.12:0,54,996	0/0:20,0:20:33.10:0,33,641	0/0:25,0:25:51.13:0,51,925	1/1:23,0:22:12.02:214,12,0	1/1:10,25:35:42.14:1363,42,0	1/1:9,12:21:36.06:922,36,0	1/1:16,9:25:30.05:853,30,0	0/0:14,0:14:30.09:0,30,581	0/0:19,0:19:27.09:0,27,555	0/0:23,0:23:45.14:0,45,888	1/1:14,18:34:36.12:1144,36,0	0/0:24,0:24:57.16:0,57,1065	1/1:10,6:17:6.02:195,6,0	0/0:30,0:30:60.04:0,60,1091	1/1:14,10:23:28.13:728,28,0	1/1:12,14:27:42.14:1191,42,0	1/1:7,8:17:3.01:97,3,0	0/0:26,0:25:48.14:0,48,914	0/0:20,0:20:42.12:0,42,791	0/0:36,0:36:78.22:0,78,1487	1/1:6,14:20:30.10:921,30,0	1/1:13,19:32:54.17:1533,54,0	1/1:13,11:24:30.10:926,30,0	1/1:7,2:9:6.02:195,6,0
chr10	57333428	.	T	TG	2316.93	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-10.584;DP=767;FS=7.299;HRun=5;HaplotypeScore=72.2677;InbreedingCoeff=0.9999;MQ=85.56;MQ0=0;MQRankSum=-1.676;QD=31.74;ReadPosRankSum=1.099;VQSLOD=4.2607;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,50:54:99:1890,144,0	0/0:14,0:14:42.11:0,42,451	0/0:40,0:40:99:0,108,1119	0/0:29,0:29:62.59:0,63,582	1/1:3,16:19:45.01:549,45,0	0/0:19,0:19:57.14:0,57,612	0/0:30,0:30:84.19:0,84,894	0/0:40,0:40:99:0,114,1190	0/0:25,0:25:69.17:0,69,741	0/0:36,0:36:84.20:0,84,903	0/0:22,0:22:60.15:0,60,645	0/0:25,0:25:66.16:0,66,709	0/0:30,0:30:78.18:0,78,829	0/0:16,0:16:45.11:0,45,484	0/0:31,0:31:90.22:0,90,960	0/0:17,0:17:51.13:0,51,548	0/0:36,0:36:99:0,102,1096	0/0:23,0:23:69.14:0,69,730	0/0:15,0:15:42.10:0,42,451	0/0:22,0:22:66.17:0,66,709	0/0:48,0:48:99:0,138,1483	0/0:34,0:34:90.20:0,90,952	0/0:24,0:24:66.13:0,66,693	0/0:28,0:28:84.21:0,84,902	0/0:23,0:23:69.16:0,69,729	0/0:25,0:25:63.15:0,63,671	0/0:27,0:26:78.20:0,78,838	0/0:15,0:15:45.11:0,45,484
chr10	57333878	.	G	GCACACACACA	3530.28	PASS	AB=0.897;AC=28;AF=0.560;AN=50;BaseQRankSum=2.931;DP=585;FS=52.333;HRun=0;HaplotypeScore=179.5061;InbreedingCoeff=0.3564;MQ=53.24;MQ0=13;MQRankSum=-5.482;QD=8.74;ReadPosRankSum=-3.440;VQSLOD=-0.2319;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:44,0:41:32.57:33,0,414	0/1:5,0:12:0:0,0,0	./.	./.	0/1:22,0:22:40.91:41,0,122	0/0:21,0:22:28.61:0,29,566	0/0:29,0:29:37.26:0,37,894	0/1:17,0:15:7.27:91,0,7	1/1:23,0:23:9.10:126,9,0	1/1:29,0:28:52.87:1126,53,0	./.	0/0:22,0:22:32.48:0,32,848	0/0:12,0:11:14.91:0,15,307	0/1:27,0:27:7.58:8,0,344	1/1:7,4:15:6.02:285,6,0	0/1:8,0:12:97.45:97,0,215	0/1:6,0:34:99:143,0,146	0/0:9,0:25:12.04:0,12,245	1/1:26,0:23:17.75:242,18,0	1/1:13,0:13:9.48:94,9,0	1/1:18,14:37:0.47:2,0,0	0/1:20,0:21:2.95:3,0,382	0/0:11,0:12:17.71:0,18,341	0/0:39,0:38:34.93:0,35,1244	1/1:11,6:21:3.48:74,3,0	1/1:25,0:25:36.45:795,36,0	1/1:18,0:14:10.60:173,11,0	1/1:6,0:5:12.04:198,12,0
chr10	57334516	.	T	TTCTCTCTCTCTC	2934.20	PASS	AC=26;AF=0.565;AN=46;BaseQRankSum=1.595;DP=496;FS=38.519;HRun=0;HaplotypeScore=166.8382;InbreedingCoeff=0.7689;MQ=69.76;MQ0=21;MQRankSum=-6.631;QD=13.52;ReadPosRankSum=-3.804;VQSLOD=0.1387;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:6.92:0,7,53	1/1:9,0:9:0.94:2,1,0	./.	./.	0/0:27,0:28:5.52:0,6,69	0/0:15,0:14:9.03:0,9,307	0/0:24,0:24:30.08:0,30,921	1/1:30,0:30:26.79:425,27,0	1/1:13,2:16:9.03:252,9,0	1/1:20,2:23:20.86:769,21,0	1/1:12,0:12:0.47:1,0,0	0/0:14,0:13:24.04:0,24,668	0/0:13,0:14:11.66:0,12,347	0/0:14,0:14:18.06:0,18,531	1/1:11,1:13:6.02:175,6,0	./.	./.	1/1:7,0:7:8.39:117,8,0	1/1:17,0:19:8.10:104,8,0	1/1:15,0:19:3.01:73,3,0	./.	0/0:26,0:26:28.46:0,28,898	0/0:20,0:17:18.06:0,18,580	0/0:9,0:9:24.04:0,24,695	1/1:12,1:13:0.47:1,0,0	1/1:23,0:21:24.95:630,25,0	1/1:18,0:18:9.03:270,9,0	1/1:12,0:10:13.60:287,14,0
chr10	57334573	.	T	TGAGAGAGAGCGA	3165.16	PASS	AB=0.911;AC=25;AF=0.481;AN=52;BaseQRankSum=0.340;DP=371;FS=4.169;HRun=0;HaplotypeScore=148.2008;InbreedingCoeff=0.5187;MQ=42.27;MQ0=42;MQRankSum=-6.499;QD=16.40;ReadPosRankSum=-4.225;VQSLOD=1.0068;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:14,0:10:14.21:14,0,42	1/1:5,0:5:12.04:408,12,0	./.	./.	0/0:15,0:22:2.99:0,3,24	0/0:14,0:12:27.08:0,27,790	0/0:27,0:22:33.08:0,33,886	0/1:29,0:26:84.56:646,0,85	1/1:13,1:15:12.04:249,12,0	0/1:11,0:11:7.29:178,0,7	0/1:5,5:10:0:0,0,0	0/0:12,0:12:30.07:0,30,853	0/0:18,0:17:29.03:0,29,574	0/0:13,0:13:30.06:0,30,743	1/1:4,0:8:3.48:51,3,0	0/0:9,0:8:18.53:0,19,462	0/1:9,0:6:4.81:271,0,5	0/0:7,0:7:7.81:0,8,186	1/1:4,3:8:14.46:580,14,0	1/1:15,0:17:0.89:2,1,0	1/1:13,0:5:2.85:24,3,0	0/0:15,0:19:32.37:0,32,589	0/0:19,0:17:35.13:0,35,762	0/0:12,0:11:24.05:0,24,670	1/1:9,1:13:0.47:1,0,0	1/1:8,0:8:17.93:298,18,0	1/1:7,2:9:6.49:346,6,0	1/1:7,1:5:9.01:269,9,0
chr10	57334575	.	A	AGAGAGAGC	2159.33	PASS	AB=0.989;AC=17;AF=0.327;AN=52;BaseQRankSum=2.766;DP=344;FS=4.378;HRun=0;HaplotypeScore=107.1762;InbreedingCoeff=0.3802;MQ=43.94;MQ0=41;MQRankSum=-6.848;QD=17.27;ReadPosRankSum=-1.365;VQSLOD=2.4978;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:10:7.20:0,7,51	1/1:4,0:4:12.04:294,12,0	./.	./.	0/0:22,0:19:2.99:0,3,24	0/0:14,0:12:27.08:0,27,623	0/0:26,0:21:33.10:0,33,749	0/1:25,0:22:99:355,0,146	0/1:11,1:11:9.40:225,0,9	0/1:9,0:8:10.07:158,0,10	0/0:14,0:12:5.99:0,6,50	0/0:12,0:12:30.07:0,30,681	0/0:19,0:17:29.40:0,29,466	0/0:13,0:13:33.05:0,33,650	0/1:7,0:7:0.14:0,0,0	0/0:9,0:8:17.98:0,18,289	0/1:9,0:6:8.41:172,0,8	0/0:5,0:5:9:0,9,164	1/1:9,0:8:20.35:395,20,0	1/1:13,1:12:0.47:2,0,0	0/1:11,0:4:0.61:1,0,1	0/0:21,0:20:32.39:0,32,453	0/0:20,0:17:35.26:0,35,625	0/0:13,0:12:27.01:0,27,527	0/0:13,1:13:2.71:0,3,20	1/1:2,4:6:17.90:367,18,0	0/1:10,0:7:10.77:195,0,11	1/1:7,0:3:4.91:153,5,0
chr10	57335358	.	CT	C	2964.24	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=10.684;DP=628;FS=0.767;HRun=10;HaplotypeScore=64.0912;InbreedingCoeff=0.9842;MQ=70.17;MQ0=0;MQRankSum=-0.925;QD=19.37;ReadPosRankSum=1.874;VQSLOD=4.5702;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,29:29:74.99:651,75,0	1/1:1,11:12:32.99:286,33,0	0/0:19,1:19:12.96:0,13,349	0/0:13,0:10:11.06:0,11,117	1/1:3,19:22:47.98:416,48,0	0/0:24,0:24:60.16:0,60,664	0/0:22,0:22:60.09:0,60,638	1/1:5,20:25:59.90:507,60,0	0/0:26,0:26:72.18:0,72,787	0/0:24,0:24:57.15:0,57,631	0/0:21,0:20:51.14:0,51,564	0/0:32,0:32:87.19:0,87,936	0/0:29,0:29:78.15:0,78,846	0/0:22,1:23:37.11:0,37,637	0/0:41,0:41:99:0,120,1306	1/1:6,17:23:47.97:417,48,0	1/1:2,24:26:62.99:547,63,0	1/1:2,14:16:38.99:338,39,0	0/0:30,0:31:71.48:0,71,734	0/0:16,0:17:49.78:0,50,516	0/0:17,0:17:45.12:0,45,497	0/0:8,0:8:18.04:0,18,192	0/0:17,0:17:45.12:0,45,498	0/0:15,0:15:42.11:0,42,465	0/0:22,0:23:60:0,60,644	0/0:29,0:29:72.18:0,72,779	0/0:37,1:38:73.50:0,73,1036	0/0:5,0:5:15.04:0,15,166
chr10	57335726	.	AT	A	3224.03	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=11.278;DP=521;FS=6.656;HRun=9;HaplotypeScore=53.8253;InbreedingCoeff=0.9832;MQ=80.65;MQ0=0;MQRankSum=-1.031;QD=21.07;ReadPosRankSum=1.657;VQSLOD=4.4655;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,20:23:19.41:432,19,0	1/1:0,9:9:27.01:247,27,0	0/0:20,0:19:49.57:0,50,467	0/0:18,0:18:15.99:0,16,253	1/1:2,28:30:80.96:730,81,0	0/0:22,0:22:57.16:0,57,647	0/0:18,0:18:51.15:0,51,589	1/1:6,19:25:56.96:503,57,0	0/0:11,1:12:8.61:0,9,341	0/0:27,0:27:54.05:0,54,832	0/0:17,0:17:48.14:0,48,549	0/0:10,0:10:27.08:0,27,312	0/0:7,0:7:21.06:0,21,242	0/0:15,0:15:39.12:0,39,450	0/0:17,0:17:48.14:0,48,554	1/1:1,8:9:24.01:220,24,0	1/1:4,32:36:87.04:796,87,0	1/1:1,20:21:54.03:494,54,0	0/0:15,0:15:36.10:0,36,408	0/0:26,0:26:78.22:0,78,892	0/0:13,0:13:33.09:0,33,374	0/0:20,0:20:57.17:0,57,658	0/0:20,0:20:57.14:0,57,630	0/0:19,0:19:51.15:0,51,589	0/0:27,0:27:75.21:0,75,851	0/0:16,0:16:39.12:0,39,450	0/0:19,0:20:57:0,57,637	0/0:8,0:8:24.07:0,24,277
chr10	57337137	.	A	ATT	813.77	PASS	AB=0.953;AC=38;AF=0.679;AN=56;BaseQRankSum=3.624;DP=307;FS=3.232;HRun=0;HaplotypeScore=148.6338;InbreedingCoeff=0.2725;MQ=66.36;MQ0=10;MQRankSum=-2.518;QD=3.82;ReadPosRankSum=-1.688;VQSLOD=2.6852;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,0:7:13.15:97,13,0	1/1:1,0:1:2.90:16,3,0	0/1:25,0:9:6.88:7,0,58	0/0:54,0:24:16.07:0,16,197	1/1:13,3:16:15.20:103,15,0	1/1:11,5:16:0.08:226,0,0	0/1:10,0:10:1.08:14,0,1	1/1:2,0:2:2.04:6,2,0	1/1:4,0:4:0.59:1,1,0	0/1:11,0:11:36.77:37,0,89	1/1:9,0:9:3.53:21,4,0	1/1:7,2:9:4.30:68,4,0	0/0:5,0:5:6.62:0,7,42	1/1:10,5:15:6.91:81,7,0	1/1:4,1:5:1.39:3,1,0	0/1:4,1:5:21.03:83,0,21	0/0:4,0:4:9.51:0,10,65	0/0:2,0:2:3.01:0,3,48	1/1:5,0:3:7.20:56,7,0	1/1:10,1:11:4.79:21,5,0	1/1:9,0:9:8.56:63,9,0	0/0:20,0:20:3.88:0,4,13	1/1:17,0:17:4.85:45,5,0	0/1:13,0:13:0.23:0,0,0	1/1:6,0:6:1.59:3,2,0	0/1:11,1:12:5.28:5,0,19	0/0:8,1:9:1.78:0,2,43	1/1:3,0:3:2.60:5,3,0
chr10	57337172	.	G	GTT	3707.65	PASS	AB=0.961;AC=46;AF=0.852;AN=54;BaseQRankSum=-0.463;DP=386;FS=20.511;HRun=0;HaplotypeScore=219.2197;InbreedingCoeff=-0.2045;MQ=55.69;MQ0=6;MQRankSum=-2.598;QD=9.61;ReadPosRankSum=-3.702;VQSLOD=1.5394;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:10:18.75:143,19,0	0/1:5,3:8:20.57:67,0,21	0/1:29,0:17:56.90:57,0,151	0/1:47,2:19:99:126,0,110	1/1:8,4:20:29.66:257,30,0	1/1:13,0:13:10.19:52,10,0	1/1:9,0:9:16.81:144,17,0	1/1:6,1:6:18.03:241,18,0	1/1:6,0:6:10.67:64,11,0	1/1:18,2:21:14.47:314,14,0	1/1:11,2:13:22.97:160,23,0	0/1:11,0:11:15.63:45,0,16	0/1:10,0:10:56.96:65,0,57	0/1:9,0:9:4.42:62,0,4	1/1:12,0:12:26.69:181,27,0	1/1:4,0:9:20.92:198,21,0	1/1:1,2:3:0.84:31,1,0	./.	0/1:5,0:3:13.25:38,0,13	1/1:12,2:14:24.22:201,24,0	1/1:12,0:12:11.31:73,11,0	1/1:20,2:22:14.04:239,14,0	1/1:19,0:20:12.38:104,12,0	1/1:14,0:15:14.91:138,15,0	0/1:17,0:17:27.10:132,0,27	1/1:12,2:14:6.68:241,7,0	1/1:17,0:17:3.10:176,3,0	1/1:9,1:10:9.51:159,10,0
chr10	57337189	.	A	ATT	7066.20	PASS	AB=0.882;AC=45;AF=0.833;AN=54;BaseQRankSum=5.585;DP=460;FS=130.199;HRun=0;HaplotypeScore=228.8560;InbreedingCoeff=-0.1927;MQ=47.91;MQ0=11;MQRankSum=-4.668;QD=15.36;ReadPosRankSum=-3.909;VQSLOD=1.5634;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,0:6:9.03:110,9,0	1/1:6,4:10:27.38:289,27,0	0/1:26,9:14:48.37:239,0,48	0/1:39,9:16:47.41:129,0,47	1/1:14,5:19:23.86:288,24,0	0/1:15,2:17:3.08:313,0,3	1/1:11,0:11:26.95:288,27,0	1/1:12,0:9:23.59:176,24,0	1/1:9,0:9:20.66:200,21,0	1/1:17,8:25:26.88:596,27,0	1/1:9,8:17:27.08:330,27,0	1/1:11,0:11:11.79:195,12,0	0/1:10,1:11:42.01:96,0,42	0/1:12,0:11:27.91:100,0,28	1/1:14,0:14:25.97:224,26,0	1/1:9,2:10:20.93:222,21,0	1/1:4,0:4:2.98:21,3,0	./.	1/1:7,0:6:13.63:83,14,0	1/1:17,8:25:4.58:411,5,0	1/1:10,0:10:14.92:185,15,0	1/1:18,8:26:31.28:499,31,0	0/1:23,3:25:1.37:309,0,1	1/1:17,1:18:20.79:174,21,0	0/1:26,3:28:32.20:637,0,32	0/1:14,4:17:48.52:266,0,49	0/1:16,3:19:2.46:361,0,2	1/1:4,6:9:24.55:324,25,0
chr10	57337223	.	AGT	A	1392.83	PASS	AB=0.986;AC=25;AF=0.446;AN=56;BaseQRankSum=-0.638;DP=547;FS=5.377;HRun=0;HaplotypeScore=225.6871;InbreedingCoeff=-0.1255;MQ=48.95;MQ0=24;MQRankSum=0.564;QD=3.46;ReadPosRankSum=-7.844;VQSLOD=-0.7092;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:16:5.45:25,5,0	1/1:16,1:17:17.79:168,18,0	0/1:29,1:10:13.45:13,0,52	0/1:47,0:19:18.39:74,0,18	0/0:17,0:15:0.11:0,0,0	0/0:18,0:18:5.17:0,5,318	0/1:23,0:23:22.83:23,0,245	1/1:23,0:20:37.90:215,38,0	0/1:10,0:10:0.99:1,0,24	0/1:22,3:25:92.65:197,0,93	1/1:14,0:13:11.09:99,11,0	0/1:16,0:16:2.79:3,0,198	0/1:17,0:17:29.99:30,0,357	0/0:14,0:13:14.08:0,14,217	0/1:21,0:20:55.62:56,0,65	0/1:13,0:12:6.98:7,0,72	1/1:6,0:6:8.68:51,9,0	0/0:2,0:2:3.01:0,3,44	0/0:15,0:14:8.65:0,9,205	0/1:20,0:20:43.11:88,0,43	0/1:22,0:22:28.46:61,0,28	0/0:27,0:27:16.02:0,16,253	0/0:26,0:24:8.69:0,9,263	0/0:26,0:26:17.63:0,18,175	0/1:25,1:25:48.68:49,0,135	0/1:22,0:22:42.69:192,0,43	0/1:19,0:18:86.54:87,0,127	0/1:12,0:11:24.99:122,0,25
chr10	57337225	.	T	TGAGA	3443.23	PASS	AB=0.943;AC=26;AF=0.464;AN=56;BaseQRankSum=-1.803;DP=553;FS=10.033;HRun=0;HaplotypeScore=231.0513;InbreedingCoeff=0.3902;MQ=50.42;MQ0=22;MQRankSum=-1.285;QD=10.01;ReadPosRankSum=-1.946;VQSLOD=1.5333;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:17,0:16:3.22:28,0,3	0/0:16,0:17:1.56:0,2,53	0/1:31,0:11:6.89:7,0,133	0/1:51,0:21:25.53:26,0,65	0/1:17,0:15:0.05:0,0,1	0/0:19,0:19:12.01:0,12,327	0/0:22,0:23:22.57:0,23,333	0/0:8,0:19:18.49:0,18,89	1/1:9,2:11:2.95:73,3,0	0/1:20,5:25:38.84:493,0,39	0/1:14,0:13:2.30:60,0,2	0/0:14,0:14:15.05:0,15,242	0/0:17,0:17:17.38:0,17,482	0/0:14,0:13:12.04:0,12,198	1/1:17,1:19:17.37:310,17,0	0/1:12,0:12:38.04:45,0,38	1/1:7,0:7:3.21:13,3,0	0/0:2,0:2:1.55:0,2,4	1/1:8,7:14:18.53:408,19,0	1/1:17,4:21:18.52:267,19,0	1/1:21,0:22:10.08:116,10,0	0/0:27,0:27:18.53:0,19,282	0/0:23,0:23:21.23:0,21,308	0/0:29,0:29:4.05:0,4,272	1/1:20,7:26:20.38:465,20,0	1/1:22,1:23:29.23:446,29,0	1/1:16,4:19:27.52:514,28,0	0/1:7,4:11:37.91:174,0,38
chr10	57337282	.	GACACACACACAC	G	3024.28	PASS	AB=0.944;AC=21;AF=0.389;AN=54;BaseQRankSum=4.604;DP=540;FS=8.771;HRun=0;HaplotypeScore=209.7435;InbreedingCoeff=0.5737;MQ=52.08;MQ0=14;MQRankSum=-6.040;QD=13.04;ReadPosRankSum=-3.161;VQSLOD=0.6875;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:29:45.15:0,45,1532	0/0:4,0:5:9.03:0,9,205	./.	0/1:44,0:32:0:0,0,0	0/0:14,0:16:32.29:0,32,1392	0/0:25,0:25:36.12:0,36,1788	0/0:22,0:24:13.03:0,13,507	0/0:36,0:33:18.06:0,18,388	1/1:4,8:13:15.05:466,15,0	0/1:18,0:18:11.67:59,0,12	1/1:8,2:10:6.02:201,6,0	0/0:16,0:16:17.78:0,18,786	0/0:13,0:13:18.06:0,18,785	0/0:18,0:18:23.73:0,24,1014	1/1:11,7:17:16.04:512,16,0	1/1:8,2:10:6.02:205,6,0	0/0:11,0:20:33.11:0,33,912	0/1:8,0:7:37.19:70,0,37	0/0:13,0:13:3.59:0,4,10	1/1:13,1:14:5.51:128,6,0	0/1:36,0:34:14.98:17,0,15	0/0:15,0:14:11.23:0,11,546	0/0:14,0:14:4.95:0,5,337	0/0:30,0:31:33.24:0,33,1460	0/1:8,2:13:2.92:316,0,3	1/1:18,4:23:23.99:621,24,0	1/1:14,2:17:15.03:303,15,0	1/1:4,3:7:9.03:309,9,0
chr10	57339106	.	C	CAAA	4698.11	PASS	AB=0.813;AC=36;AF=0.667;AN=54;BaseQRankSum=2.466;DP=487;FS=0.593;HRun=14;HaplotypeScore=106.8358;InbreedingCoeff=0.6961;MQ=50.29;MQ0=8;MQRankSum=-3.982;QD=12.70;ReadPosRankSum=-5.419;VQSLOD=1.3739;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,1:32:21.69:157,22,0	1/1:3,0:8:6.02:88,6,0	0/0:12,0:7:13.92:0,14,103	./.	1/1:6,0:22:29.68:204,30,0	0/0:11,0:13:22.12:0,22,208	0/0:15,0:12:23.80:0,24,246	1/1:24,6:29:45.42:547,45,0	1/1:7,6:14:12.02:176,12,0	1/1:10,5:17:20.51:251,21,0	1/1:13,0:13:23.78:195,24,0	0/1:20,0:19:18.39:18,0,90	0/0:9,0:9:10.37:0,10,81	0/0:19,0:18:9.77:0,10,108	1/1:6,13:22:18.01:267,18,0	1/1:8,0:8:11.95:105,12,0	1/1:19,4:26:29.78:435,30,0	0/1:5,0:15:6.62:91,0,7	1/1:15,0:23:35.85:355,36,0	1/1:12,15:27:39.02:530,39,0	1/1:7,5:12:1.14:33,1,0	0/0:14,0:15:0.91:0,1,113	0/0:9,0:11:12.91:0,13,144	0/0:16,0:16:21.24:0,21,210	1/1:10,6:18:24.44:317,24,0	1/1:10,10:26:53.79:561,54,0	1/1:11,8:25:26.98:315,27,0	1/1:2,1:4:3.01:52,3,0
chr10	57342268	.	CCA	C	377.14	PASS	AB=0.950;AC=14;AF=0.269;AN=52;BaseQRankSum=6.189;DP=473;FS=17.717;HRun=0;HaplotypeScore=54.8688;InbreedingCoeff=0.3047;MQ=48.78;MQ0=54;MQRankSum=-1.913;QD=1.95;ReadPosRankSum=1.783;VQSLOD=0.0199;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:13,9:19:24.02:261,24,0	./.	0/0:80,0:14:27.03:0,27,316	0/1:68,0:14:11.62:12,0,41	1/1:5,1:4:6.02:73,6,0	0/0:16,0:15:39.13:0,39,592	0/1:17,2:19:0.28:0,0,445	./.	0/1:11,1:10:12.32:12,0,300	0/0:12,0:10:11.96:0,12,137	0/1:16,0:15:6.20:6,0,372	0/0:13,0:9:15.05:0,15,239	0/0:5,0:4:3.01:0,3,48	0/1:19,0:15:1.15:1,0,387	0/0:3,0:3:6.02:0,6,97	1/1:2,0:2:5.83:34,6,0	0/0:12,0:9:0.24:0,0,3	1/1:12,0:19:20.74:102,21,0	0/0:14,0:10:6.02:0,6,95	0/0:5,0:5:3.01:0,3,46	0/0:50,1:45:38.82:0,39,1055	0/0:4,0:4:6.02:0,6,93	0/1:6,1:6:24.35:24,0,129	0/0:27,0:22:27.04:0,27,352	0/0:3,0:2:6.02:0,6,97	0/0:10,0:8:18.05:0,18,246	0/0:8,0:7:12.04:0,12,192	0/0:5,0:3:5.99:0,6,49
chr10	57342298	.	CG	C	758.12	PASS	AC=6;AF=0.111;AN=54;BaseQRankSum=7.159;DP=507;FS=7.366;HRun=1;HaplotypeScore=62.7395;InbreedingCoeff=0.6095;MQ=36.58;MQ0=66;MQRankSum=-4.763;QD=13.54;ReadPosRankSum=-1.132;VQSLOD=1.8488;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,5:20:14.76:127,15,0	0/0:8,0:6:1.07:0,1,17	0/0:49,1:3:2.84:0,3,40	0/0:56,0:2:6.02:0,6,94	1/1:11,0:6:6.02:96,6,0	0/0:20,0:19:39.96:0,40,624	0/0:23,0:20:36.02:0,36,564	0/0:11,0:6:5.89:0,6,63	0/0:12,0:12:24.02:0,24,363	0/0:14,0:7:15.04:0,15,211	0/0:9,1:9:25.32:0,25,367	0/0:20,0:13:20.46:0,20,270	0/0:6,0:3:6.02:0,6,93	0/0:16,0:16:36.03:0,36,513	0/0:4,1:4:9.02:0,9,117	./.	0/0:18,0:15:11.27:0,11,79	1/1:6,15:19:39.40:664,39,0	0/0:12,0:9:16.28:0,16,190	0/0:7,0:6:9.03:0,9,143	0/0:76,0:61:94.90:0,95,1363	0/0:4,0:2:3.01:0,3,45	0/0:8,0:6:8.99:0,9,141	0/0:27,0:22:9.54:0,10,214	0/0:10,0:8:18.02:0,18,248	0/0:14,0:11:30.09:0,30,432	0/0:9,0:8:22.32:0,22,336	0/0:9,0:3:6.02:0,6,96
chr10	57342313	.	ACG	A	554.13	PASS	AB=1.000;AC=20;AF=0.385;AN=52;BaseQRankSum=4.376;DP=490;FS=2.100;HRun=0;HaplotypeScore=77.4046;InbreedingCoeff=-0.0378;MQ=38.05;MQ0=47;MQRankSum=-0.691;QD=1.64;ReadPosRankSum=-1.409;VQSLOD=1.6743;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:22:10.39:58,10,0	0/1:11,0:8:8.38:8,0,14	0/0:31,0:2:0.86:0,1,17	0/1:36,0:2:1.24:1,0,5	./.	0/0:19,0:18:3:0,3,177	0/0:25,0:20:19.63:0,20,188	0/0:12,0:9:14.84:0,15,82	0/0:12,0:12:17.72:0,18,135	0/1:16,0:9:17.28:17,0,39	0/0:8,0:8:14.93:0,15,116	0/1:18,0:14:12.81:13,0,82	0/1:10,0:7:8.20:8,0,36	0/0:13,0:13:3.80:0,4,112	0/0:4,0:3:4.17:0,4,20	./.	0/1:18,0:16:43.77:44,0,49	0/1:20,0:19:2.03:2,0,140	0/1:14,0:12:28.49:28,0,37	0/0:7,0:6:9.02:0,9,119	0/1:78,0:68:54.44:54,0,421	1/1:5,0:3:5.99:49,6,0	1/1:6,0:3:0.89:2,1,0	1/1:30,4:30:41.79:388,42,0	0/1:12,0:10:14.37:14,0,147	0/1:19,0:15:8.98:9,0,173	0/0:7,0:7:16.21:0,16,214	0/1:16,0:8:5.94:6,0,117
chr10	57342684	.	CTT	C	785.21	PASS	AB=0.744;AC=15;AF=0.268;AN=56;BaseQRankSum=4.558;DP=411;FS=8.258;HRun=16;HaplotypeScore=57.2557;InbreedingCoeff=0.6980;MQ=77.55;MQ0=1;MQRankSum=-0.469;QD=6.95;ReadPosRankSum=4.630;VQSLOD=-0.5321;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:23:16.89:78,17,0	1/1:2,2:6:6.11:36,6,0	0/0:17,0:12:13.92:0,14,127	0/0:18,0:15:10.61:0,11,120	1/1:3,0:10:19.14:82,19,0	0/0:8,0:10:23.43:0,23,271	0/0:14,0:15:35.38:0,35,387	0/1:8,14:24:14.23:255,0,14	0/0:14,0:14:39.12:0,39,497	0/0:25,0:30:45.54:0,46,434	0/1:4,1:5:10.08:10,0,117	0/0:20,0:24:47.47:0,47,542	0/0:8,0:9:17.37:0,17,184	0/0:13,0:13:36.08:0,36,438	0/0:11,0:14:30.06:0,30,350	1/1:2,6:8:11.94:100,12,0	1/1:2,12:15:29.69:237,30,0	1/1:6,7:14:20.58:162,21,0	0/0:16,0:17:38.47:0,38,457	0/0:9,0:9:15.57:0,16,129	0/0:14,0:15:18.64:0,19,191	0/1:6,1:8:10.09:10,0,112	0/0:8,0:8:19.26:0,19,205	0/0:18,0:21:49.82:0,50,544	0/0:12,0:12:27.97:0,28,344	0/0:18,0:20:34.49:0,34,341	0/0:10,0:13:29.39:0,29,301	0/0:15,0:18:50.34:0,50,528
chr10	57343765	.	TG	T	2187.09	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.497;DP=637;FS=3.874;HRun=1;HaplotypeScore=63.3158;InbreedingCoeff=0.9971;MQ=68.87;MQ0=0;MQRankSum=1.027;QD=33.14;ReadPosRankSum=-2.052;VQSLOD=2.7826;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,114,1521	1/1:0,10:10:21.07:293,21,0	0/0:12,0:11:26.42:0,26,394	0/0:13,0:13:38.74:0,39,470	0/0:34,0:34:99:0,99,1372	0/0:20,0:20:57.15:0,57,794	0/0:15,0:15:45.10:0,45,600	1/1:0,35:35:99:1368,105,0	0/0:20,0:20:60.19:0,60,859	0/0:39,0:39:99:0,117,1664	0/0:41,0:41:99:0,111,1572	0/0:14,0:14:42.10:0,42,572	0/0:24,0:24:72.24:0,72,1047	0/0:10,0:10:30.07:0,30,401	0/0:25,0:25:75.24:0,75,1076	0/0:12,0:12:36.10:0,36,507	1/1:0,21:21:48.16:668,48,0	0/0:23,0:23:69.22:0,69,987	0/0:24,0:24:72.17:0,72,940	0/0:34,0:34:99:0,102,1449	0/0:22,0:22:66.21:0,66,941	0/0:17,0:17:51.16:0,51,726	0/0:27,0:27:81.26:0,81,1162	0/0:8,0:8:24.07:0,24,332	0/0:24,0:24:69.16:0,69,943	0/0:30,0:30:90.26:0,90,1256	0/0:30,0:30:90.25:0,90,1255	0/0:15,0:15:45.15:0,45,657
chr10	57344077	.	A	ACACACG	1968.41	PASS	AB=0.989;AC=12;AF=0.222;AN=54;BaseQRankSum=-1.431;DP=684;FS=23.412;HRun=0;HaplotypeScore=181.0555;InbreedingCoeff=0.4739;MQ=44.45;MQ0=28;MQRankSum=-2.050;QD=7.40;ReadPosRankSum=-0.932;VQSLOD=0.8117;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:45,0:39:99:101,0,112	./.	0/1:21,0:4:7.08:7,0,83	0/0:29,0:8:9.90:0,10,137	0/1:31,0:30:15.96:16,0,134	0/0:13,0:13:18:0,18,238	0/0:36,0:35:54.21:0,54,903	1/1:24,0:20:21.58:349,22,0	0/0:21,0:20:15.65:0,16,112	0/0:21,0:21:9.41:0,9,245	0/0:14,0:14:6.46:0,6,51	0/0:25,0:23:47.72:0,48,663	0/0:23,0:23:59.43:0,59,854	0/0:20,0:20:36.06:0,36,596	0/0:17,0:15:5.71:0,6,41	1/1:25,3:24:33.29:466,33,0	1/1:31,3:34:4.85:758,5,0	1/1:20,0:20:41.23:418,41,0	0/0:15,0:11:23.83:0,24,182	0/0:21,0:20:15.35:0,15,108	0/1:56,0:49:17:17,0,258	0/0:35,0:34:65.76:0,66,1011	0/0:24,0:23:41.91:0,42,551	0/0:44,0:43:99:0,99,1441	0/0:14,0:13:5.95:0,6,55	0/0:14,0:13:34.48:0,34,258	0/0:16,0:14:17.06:0,17,105	0/0:9,0:8:7.94:0,8,50
chr10	57344079	.	ACG	A	1997.03	PASS	AB=0.946;AC=30;AF=0.536;AN=56;BaseQRankSum=6.219;DP=671;FS=19.400;HRun=0;HaplotypeScore=138.2364;InbreedingCoeff=0.3145;MQ=43.52;MQ0=29;MQRankSum=-3.718;QD=4.54;ReadPosRankSum=-5.182;VQSLOD=-0.0996;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:45,0:39:70.17:70,0,162	0/0:8,0:8:0.89:0,1,2	0/1:21,0:4:10.67:11,0,40	0/0:26,0:5:9.49:0,9,75	0/0:26,1:26:1.78:0,2,177	0/0:12,1:13:17.58:0,18,207	0/0:38,0:36:52.67:0,53,724	0/1:18,6:20:63.67:64,0,198	1/1:21,0:20:24.63:181,25,0	1/1:20,0:20:41.51:310,42,0	1/1:14,0:14:6.42:45,6,0	0/1:26,0:24:34.84:35,0,406	0/1:24,0:24:19.02:19,0,479	0/0:20,0:20:35.92:0,36,413	1/1:18,0:16:6.01:49,6,0	0/1:27,3:25:69.37:69,0,156	0/1:35,1:34:58.62:59,0,434	0/1:20,3:20:37.87:38,0,291	1/1:13,0:9:19.35:138,19,0	1/1:21,1:20:25.15:207,25,0	1/1:51,0:45:52.94:456,53,0	0/0:33,0:32:21.01:0,21,662	0/0:23,0:22:14.66:0,15,341	0/0:43,0:42:62.32:0,62,1011	1/1:13,0:13:5.77:34,6,0	1/1:15,0:14:28.31:189,28,0	1/1:14,0:12:21.27:156,21,0	1/1:7,1:7:9.76:60,10,0
chr10	57344118	.	GAC	G	499.23	PASS	AB=0.909;AC=5;AF=0.089;AN=56;BaseQRankSum=4.149;DP=789;FS=7.448;HRun=0;HaplotypeScore=120.9807;InbreedingCoeff=0.6998;MQ=46.08;MQ0=37;MQRankSum=2.034;QD=7.45;ReadPosRankSum=1.841;VQSLOD=3.0343;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,1:30:20.76:0,21,343	0/0:12,0:11:7.27:0,7,103	0/0:28,0:8:14.73:0,15,148	0/0:33,0:6:8.37:0,8,73	0/0:24,0:18:21.07:0,21,344	0/0:14,0:14:26.79:0,27,447	0/0:38,1:37:77.21:0,77,1198	0/0:37,0:32:81.26:0,81,1271	0/0:19,2:19:33.09:0,33,524	0/0:39,0:34:97.19:0,97,1510	0/0:18,0:17:21.07:0,21,351	0/0:33,0:30:60.15:0,60,964	0/0:22,0:22:56:0,56,836	0/0:29,0:29:63.18:0,63,994	0/0:27,0:24:24.06:0,24,374	1/1:12,18:23:18.04:229,18,0	0/0:33,0:32:69.69:0,70,1124	1/1:13,14:22:12.65:379,13,0	0/1:9,1:8:14.11:14,0,325	0/0:24,0:21:49.72:0,50,805	0/0:73,0:64:99:0,131,2108	0/0:34,2:34:27.91:0,28,913	0/0:21,0:20:41.93:0,42,625	0/0:65,0:62:99:0,142,2119	0/0:10,0:9:15.04:0,15,208	0/0:24,1:24:28.01:0,28,952	0/0:14,0:14:29.86:0,30,423	0/0:7,0:7:15.02:0,15,203
chr10	57344194	.	CACAG	C	843.26	PASS	AB=0.886;AC=11;AF=0.212;AN=52;BaseQRankSum=6.517;DP=790;FS=1.773;HRun=0;HaplotypeScore=100.6860;InbreedingCoeff=0.6629;MQ=34.46;MQ0=115;MQRankSum=-3.049;QD=6.54;ReadPosRankSum=0.627;VQSLOD=2.0512;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:16,3:13:3.01:33,3,0	1/1:1,8:8:6.02:113,6,0	./.	./.	0/0:18,2:13:0:0,0,0	0/0:16,0:12:21.04:0,21,524	0/0:43,1:25:8.90:0,9,208	1/1:6,8:6:15.02:215,15,0	0/0:31,0:25:30.10:0,30,748	0/1:34,5:33:99:185,0,959	0/0:19,2:18:9.03:0,9,178	0/0:45,0:35:44.49:0,44,955	0/0:53,0:40:35.73:0,36,688	0/0:32,0:30:36.49:0,36,782	0/0:35,0:29:15.05:0,15,331	1/1:23,2:9:0.89:2,1,0	1/1:4,18:17:10.78:436,11,0	0/0:18,0:8:18.01:0,18,219	0/0:26,0:16:39.09:0,39,807	0/0:25,2:22:17.82:0,18,284	0/0:85,0:61:62.05:0,62,1308	0/0:37,0:31:30.82:0,31,586	0/0:27,0:18:18.04:0,18,302	0/0:61,0:54:45.07:0,45,1008	0/0:12,2:13:12.04:0,12,310	0/0:26,0:20:5.88:0,6,766	0/0:21,0:19:27.09:0,27,531	0/0:11,0:8:11.79:0,12,405
chr10	57344198	.	G	GACAC	269.06	PASS	AB=0.909;AC=10;AF=0.192;AN=52;BaseQRankSum=6.188;DP=758;FS=2.136;HRun=0;HaplotypeScore=95.8282;InbreedingCoeff=0.5745;MQ=32.98;MQ0=127;MQRankSum=-3.977;QD=2.17;ReadPosRankSum=-1.246;VQSLOD=1.9283;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:10,7:12:2.93:73,3,0	0/0:9,0:8:5.97:0,6,44	./.	./.	0/1:14,4:12:0.12:0,0,0	0/0:15,0:11:21.04:0,21,283	0/0:40,0:22:5.89:0,6,107	1/1:14,0:6:11.33:119,11,0	0/0:30,0:23:30.08:0,30,466	0/1:34,0:28:13.78:14,0,598	0/0:20,0:17:3.01:0,3,54	0/0:44,0:33:35.64:0,36,554	0/0:49,0:36:20.75:0,21,329	0/0:30,0:28:26.60:0,27,411	0/0:32,0:27:9.02:0,9,128	1/1:16,8:8:2.80:13,3,0	0/0:21,1:17:13.85:0,14,142	1/1:13,3:7:15.03:184,15,0	0/0:22,0:13:33.10:0,33,516	0/0:27,0:21:11.61:0,12,126	0/0:84,0:58:46.77:0,47,594	0/0:38,0:31:8.16:0,8,296	0/0:27,1:18:6.02:0,6,80	0/0:55,0:49:32.63:0,33,519	0/0:14,0:13:15.04:0,15,231	0/0:25,0:17:37.94:0,38,525	0/0:22,0:20:15.05:0,15,230	0/0:10,0:7:7.08:0,7,279
chr10	57344208	.	C	CAG	110.72	PASS	AC=4;AF=0.077;AN=52;BaseQRankSum=3.070;DP=759;FS=7.660;HRun=0;HaplotypeScore=84.1241;InbreedingCoeff=0.5218;MQ=30.01;MQ0=164;MQRankSum=-1.852;QD=3.57;ReadPosRankSum=1.625;VQSLOD=1.1129;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:16,2:12:0.64:2,1,0	0/0:9,0:7:6.02:0,6,87	./.	./.	0/0:20,4:14:0:0,0,0	0/0:18,0:14:2.02:0,2,127	0/0:47,0:28:6.01:0,6,91	0/0:15,0:6:14.81:0,15,156	0/0:31,0:24:33.01:0,33,380	0/0:35,0:29:65.44:0,65,820	0/0:16,0:13:3.01:0,3,44	0/0:44,0:30:35.61:0,36,352	0/0:50,0:34:20.83:0,21,245	0/0:30,0:24:24.47:0,24,279	0/0:32,0:22:8.79:0,9,107	0/0:21,1:7:0.47:0,0,1	0/0:23,0:18:29.90:0,30,393	1/1:10,3:6:12:195,12,0	0/0:18,0:12:36.02:0,36,447	0/0:25,0:19:5.97:0,6,65	0/0:78,0:47:29.79:0,30,294	0/0:40,0:31:17.57:0,18,249	0/0:25,0:15:5.98:0,6,47	0/0:49,0:41:30.01:0,30,350	0/0:18,0:15:14.92:0,15,187	0/0:21,0:13:29.94:0,30,373	0/0:20,0:17:20.97:0,21,256	0/0:10,0:7:18.01:0,18,246
chr10	57344238	.	AAC	A	54.91	PASS	AB=0.800;AC=5;AF=0.104;AN=48;BaseQRankSum=3.660;DP=694;FS=18.742;HRun=0;HaplotypeScore=81.0956;InbreedingCoeff=0.4122;MQ=25.88;MQ0=195;MQRankSum=-2.870;QD=0.92;ReadPosRankSum=-1.048;VQSLOD=-0.0029;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:18,4:10:7.18:43,7,0	./.	./.	./.	1/1:22,4:15:4.51:12,5,0	0/0:14,0:10:5.99:0,6,86	0/0:38,0:27:32.44:0,32,420	0/0:21,0:13:33.11:0,33,533	0/0:25,0:16:12.03:0,12,164	0/0:32,0:18:42.14:0,42,689	./.	0/0:36,0:22:25.87:0,26,344	0/0:42,0:29:25.52:0,26,401	0/0:30,0:22:24.07:0,24,335	0/0:23,0:12:6.01:0,6,77	0/0:20,1:9:3.36:0,3,98	0/0:12,0:8:5.85:0,6,66	0/1:9,3:7:13.10:102,0,13	0/0:12,0:6:12.04:0,12,186	0/0:32,0:23:9.03:0,9,127	0/0:54,0:21:0:0,0,0	0/0:35,0:27:6.02:0,6,85	0/0:25,0:15:9.01:0,9,100	0/0:57,0:48:54.18:0,54,828	0/0:27,0:21:8.68:0,9,100	0/0:15,0:5:9:0,9,117	0/0:20,0:17:15.05:0,15,239	0/0:4,0:1:3.01:0,3,51
chr10	57344250	.	GAC	G	45.57	PASS	AB=0.854;AC=4;AF=0.083;AN=48;BaseQRankSum=3.460;DP=701;FS=0.000;HRun=0;HaplotypeScore=85.8247;InbreedingCoeff=0.3197;MQ=26.93;MQ0=192;MQRankSum=-3.105;QD=0.42;ReadPosRankSum=-0.706;VQSLOD=1.4974;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:17,12:15:19.68:30,0,20	./.	./.	./.	1/1:13,13:15:8.98:109,9,0	0/0:14,0:11:5.97:0,6,90	0/0:40,0:30:41.23:0,41,633	0/0:23,0:14:30.03:0,30,330	0/0:22,0:13:12.04:0,12,186	0/0:32,0:18:42.14:0,42,669	./.	0/0:38,0:25:33.04:0,33,464	0/0:42,0:29:30.41:0,30,491	0/0:32,0:23:27.07:0,27,409	0/0:21,0:9:6.02:0,6,97	0/0:21,2:13:3.34:0,3,98	0/0:12,0:8:3.48:0,3,35	0/0:14,0:9:9.14:0,9,41	0/0:13,0:4:6.02:0,6,102	0/0:32,0:22:9.03:0,9,152	0/1:54,0:19:0:0,0,0	0/0:29,0:20:12.02:0,12,162	0/0:25,0:17:12.04:0,12,175	0/0:57,0:49:69.23:0,69,1141	0/0:30,0:23:7.57:0,8,150	0/0:17,0:6:15.01:0,15,192	0/0:19,0:17:15.02:0,15,247	0/0:4,0:1:3.01:0,3,51
chr10	57344296	.	G	GAC	479.51	PASS	AB=0.757;AC=20;AF=0.435;AN=46;BaseQRankSum=1.883;DP=768;FS=9.159;HRun=0;HaplotypeScore=99.6233;InbreedingCoeff=0.5311;MQ=31.76;MQ0=201;MQRankSum=-6.069;QD=1.64;ReadPosRankSum=-2.136;VQSLOD=0.7302;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:18:2.99:0,3,23	1/1:8,0:5:3.81:19,4,0	./.	./.	./.	0/0:16,0:14:11.48:0,11,146	0/0:61,0:42:56.94:0,57,639	1/1:23,0:2:2.98:21,3,0	1/1:16,1:9:3.01:36,3,0	1/1:32,1:10:1.44:107,1,0	./.	0/0:39,0:32:72.69:0,73,890	0/0:29,0:25:48.02:0,48,560	0/0:42,0:35:69.13:0,69,821	0/1:21,3:8:0:0,0,0	1/1:26,0:16:2.43:11,2,0	0/0:8,0:6:2.92:0,3,17	1/1:17,1:11:7.13:58,7,0	1/1:45,6:6:18.05:263,18,0	0/0:29,1:21:0:0,0,0	1/1:37,2:7:1.25:3,1,0	0/0:40,0:31:41.78:0,42,486	0/0:28,0:21:39.12:0,39,476	0/0:67,0:57:99:0,102,1211	1/1:19,13:21:3.31:15,3,0	0/0:23,0:10:3.44:0,3,39	0/1:8,11:12:14.92:91,0,15	./.
chr10	57344306	.	CAGACACACACACAT	C	598.67	PASS	AB=0.996;AC=20;AF=0.417;AN=48;BaseQRankSum=4.121;DP=760;FS=21.566;HRun=0;HaplotypeScore=160.7168;InbreedingCoeff=0.3129;MQ=33.46;MQ0=164;MQRankSum=-7.459;QD=1.81;ReadPosRankSum=-2.825;VQSLOD=0.9531;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:19:2.87:0,3,23	0/0:9,0:6:0.52:0,1,5	./.	./.	./.	0/1:15,0:13:11.77:12,0,330	0/0:63,0:45:77.16:0,77,1378	1/1:33,0:7:3.45:22,3,0	1/1:13,0:7:6.02:70,6,0	1/1:27,0:6:16.31:171,16,0	./.	0/0:42,0:38:86.58:0,87,2243	0/0:31,0:29:63.74:0,64,1240	0/0:45,0:40:83.27:0,83,1996	0/1:24,0:13:0:0,0,0	0/1:28,0:19:6.12:6,0,11	0/0:8,0:6:3.40:0,3,18	0/1:22,0:14:44.85:73,0,45	1/1:43,0:6:18.04:237,18,0	0/1:21,0:12:0:0,0,0	1/1:32,0:6:1.25:3,1,0	0/0:41,0:33:51.16:0,51,1336	0/0:29,0:21:42.07:0,42,900	0/0:71,0:61:99:0,121,2996	1/1:28,0:18:3.07:11,3,0	0/1:22,0:9:36.06:93,0,36	0/1:20,0:12:26.79:44,0,27	0/1:2,0:2:0:0,0,0
chr10	57344318	.	CAT	C	284.01	PASS	AB=0.945;AC=11;AF=0.250;AN=44;BaseQRankSum=5.841;DP=726;FS=0.921;HRun=0;HaplotypeScore=104.0275;InbreedingCoeff=0.0266;MQ=34.65;MQ0=138;MQRankSum=-6.567;QD=1.52;ReadPosRankSum=-4.081;VQSLOD=0.9843;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:21:2.54:0,3,25	0/0:10,0:7:1.11:0,1,7	./.	./.	./.	0/1:18,0:16:5.18:5,0,304	0/0:60,0:45:78.18:0,78,1317	0/0:31,0:9:2.96:0,3,19	1/1:9,3:5:5.60:44,6,0	0/1:19,3:9:38.56:179,0,39	./.	0/0:43,0:40:86.51:0,87,1444	0/0:30,0:28:57.62:0,58,888	0/0:47,0:42:79.58:0,80,1357	./.	0/0:27,0:17:0.21:0,0,12	0/0:6,0:4:3.48:0,3,30	0/1:22,1:14:47.27:47,0,164	0/1:21,1:5:4.77:5,0,74	0/1:16,2:9:0:0,0,0	1/1:29,1:5:0.47:1,0,0	0/0:47,0:41:57.09:0,57,954	0/0:29,3:23:45.10:0,45,734	0/0:70,0:61:99:0,121,1917	./.	0/1:20,2:7:43.81:93,0,44	0/1:20,0:13:21.97:22,0,90	0/0:3,0:3:1.44:0,1,4
chr10	57344368	.	GAC	G	154.81	PASS	AB=0.866;AC=9;AF=0.214;AN=42;BaseQRankSum=4.420;DP=677;FS=5.629;HRun=0;HaplotypeScore=78.1833;InbreedingCoeff=0.3418;MQ=29.89;MQ0=180;MQRankSum=-5.268;QD=1.39;ReadPosRankSum=1.244;VQSLOD=1.0787;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:19:2.88:0,3,32	0/0:6,0:5:2.88:0,3,29	./.	./.	./.	0/0:18,0:11:17.88:0,18,295	0/0:46,1:36:30:0,30,418	0/0:26,0:3:0:0,0,0	1/1:12,6:9:6.02:71,6,0	0/1:19,5:7:85.37:92,0,85	./.	0/0:48,0:35:60.08:0,60,1000	0/0:51,1:36:36.01:0,36,497	0/0:44,0:35:37.34:0,37,586	1/1:21,9:20:0.47:1,0,0	0/0:27,0:14:7.22:0,7,88	0/0:12,0:9:0.19:0,0,37	0/0:14,0:7:12.04:0,12,196	./.	0/1:15,2:13:0:0,0,0	0/0:35,1:9:0:0,0,0	0/0:44,0:33:27.08:0,27,463	0/0:19,0:9:12:0,12,171	0/0:69,0:55:48.08:0,48,730	./.	0/1:12,2:5:62.58:63,0,92	1/1:7,1:4:3.01:34,3,0	./.
chr10	57344374	.	C	CAG	182.78	PASS	AB=1.000;AC=8;AF=0.182;AN=44;BaseQRankSum=4.102;DP=674;FS=3.076;HRun=0;HaplotypeScore=74.7433;InbreedingCoeff=0.2610;MQ=29.22;MQ0=191;MQRankSum=-4.972;QD=1.38;ReadPosRankSum=0.585;VQSLOD=0.9283;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:19:3.01:0,3,44	0/0:6,0:5:3.01:0,3,33	./.	./.	./.	0/0:18,0:10:18.03:0,18,273	0/0:40,0:30:29.98:0,30,384	0/0:18,0:2:2.94:0,3,18	1/1:17,1:9:6.02:92,6,0	0/1:22,0:7:73.70:116,0,74	./.	0/0:49,0:37:60.18:0,60,889	0/0:54,0:35:36.03:0,36,488	0/0:47,0:37:40.24:0,40,545	0/0:28,0:19:2.89:0,3,16	0/1:28,0:15:3.59:4,0,78	0/0:13,0:10:1.29:0,1,68	0/0:11,0:7:12.04:0,12,183	./.	0/0:15,1:14:0:0,0,0	0/1:39,0:9:0:0,0,0	0/0:45,0:32:27.09:0,27,411	0/0:19,0:10:12:0,12,157	0/0:71,0:54:48.01:0,48,679	./.	0/1:16,0:5:26.54:27,0,86	1/1:7,1:4:3.01:53,3,0	0/0:3,2:4:0:0,0,0
chr10	57344382	.	CACAG	C	363.21	PASS	AB=0.910;AC=18;AF=0.409;AN=44;BaseQRankSum=5.593;DP=657;FS=2.589;HRun=0;HaplotypeScore=72.5708;InbreedingCoeff=0.4010;MQ=27.67;MQ0=192;MQRankSum=-5.191;QD=1.46;ReadPosRankSum=-1.016;VQSLOD=1.6041;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:31,0:18:0:0,0,0	./.	./.	./.	1/1:11,0:9:1.72:4,2,0	0/0:18,0:9:14.88:0,15,293	0/0:38,0:28:17.63:0,18,174	0/1:14,0:2:0:0,0,0	1/1:14,4:9:6.02:85,6,0	0/1:20,3:8:85.62:86,0,165	./.	0/0:48,0:37:56.87:0,57,1081	0/0:48,0:30:20.96:0,21,449	0/0:44,0:36:29.24:0,29,552	1/1:22,7:20:3.01:51,3,0	0/0:29,1:15:2.44:0,2,33	1/1:4,9:10:8.99:129,9,0	0/0:12,0:8:11.95:0,12,134	./.	0/1:13,3:13:0:0,0,0	0/1:41,1:11:0.03:0,0,0	0/0:40,0:31:24.02:0,24,476	0/1:18,0:10:3.94:4,0,36	0/0:65,0:47:27.09:0,27,637	./.	0/1:18,2:5:96.68:97,0,134	1/1:7,1:4:3.01:32,3,0	0/1:3,3:4:0:0,0,0
chr10	57344384	.	CAG	C	95.21	PASS	AB=1.000;AC=17;AF=0.405;AN=42;BaseQRankSum=5.811;DP=655;FS=4.149;HRun=0;HaplotypeScore=65.1665;InbreedingCoeff=0.4123;MQ=27.42;MQ0=198;MQRankSum=-5.355;QD=0.41;ReadPosRankSum=-0.636;VQSLOD=0.8562;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:17:0:0,0,0	./.	./.	./.	1/1:10,0:8:0.43:1,0,0	0/0:17,0:8:14.85:0,15,232	0/0:39,0:29:17.63:0,18,151	./.	1/1:19,0:10:5.89:39,6,0	0/1:24,0:9:54.22:54,0,142	./.	0/0:50,0:37:56.81:0,57,833	0/0:47,1:30:20.39:0,20,346	0/0:42,0:34:28.84:0,29,434	1/1:27,0:18:2.92:17,3,0	0/0:28,1:14:2.19:0,2,36	1/1:12,0:9:8.58:48,9,0	0/0:13,0:8:11.92:0,12,91	./.	0/1:15,0:12:0:0,0,0	0/1:44,0:11:0.02:0,0,0	0/0:42,0:33:27.03:0,27,392	0/1:19,0:12:4.32:4,0,4	0/0:59,1:43:29.85:0,30,487	./.	0/1:19,0:5:38.21:38,0,90	1/1:8,0:5:2.88:15,3,0	0/1:6,0:4:0:0,0,0
chr10	57344386	.	G	GACAC	95.78	PASS	AB=0.995;AC=13;AF=0.342;AN=38;BaseQRankSum=3.998;DP=651;FS=0.000;HRun=0;HaplotypeScore=71.2669;InbreedingCoeff=0.4541;MQ=27.06;MQ0=196;MQRankSum=-3.687;QD=0.52;ReadPosRankSum=0.123;VQSLOD=1.1081;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	0/0:10,0:8:0:0,0,0	0/0:16,0:8:4:0,4,149	0/0:35,0:26:4.83:0,5,59	./.	1/1:16,1:9:1.25:3,1,0	0/0:25,0:9:12.48:0,12,159	./.	0/0:49,0:36:36.36:0,36,583	0/0:49,0:31:20.43:0,20,297	0/0:44,0:36:17.34:0,17,263	1/1:27,0:18:3.01:58,3,0	1/1:30,1:15:3.48:38,3,0	0/1:13,0:10:1.39:5,0,1	1/1:11,2:8:6.02:92,6,0	./.	0/1:14,0:11:0:0,0,0	0/1:42,1:10:0:0,0,0	0/0:41,0:32:20.50:0,20,271	0/0:17,0:11:2.37:0,2,8	0/0:61,0:44:7.09:0,7,340	./.	0/1:20,0:5:2.07:2,0,98	./.	0/1:6,0:4:0:0,0,0
chr10	57344396	.	C	CAG	81.75	PASS	AB=0.906;AC=6;AF=0.143;AN=42;BaseQRankSum=3.113;DP=667;FS=0.000;HRun=0;HaplotypeScore=62.3438;InbreedingCoeff=0.5239;MQ=26.37;MQ0=215;MQRankSum=-3.659;QD=0.71;ReadPosRankSum=-1.553;VQSLOD=1.1993;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:20,6:13:0.01:0,0,0	0/0:5,0:4:9.03:0,9,134	./.	./.	0/0:8,5:11:1.24:0,1,3	0/0:15,0:7:9.02:0,9,115	0/0:36,0:22:5.81:0,6,58	0/0:15,0:2:3.01:0,3,46	0/0:17,0:8:2.99:0,3,28	0/0:22,0:7:17.98:0,18,225	./.	0/0:46,0:33:38.75:0,39,468	0/0:51,0:34:29.94:0,30,300	0/0:41,0:32:23.91:0,24,257	0/0:27,0:17:2.59:0,3,10	1/1:18,10:13:2.83:57,3,0	0/0:15,0:12:11.72:0,12,120	1/1:18,0:12:17.51:123,18,0	./.	0/0:15,0:11:0:0,0,0	0/1:43,0:12:0:0,0,0	0/0:47,0:38:26.93:0,27,302	0/0:15,0:11:5.95:0,6,64	0/0:59,0:42:29.97:0,30,389	./.	0/0:23,0:6:15.05:0,15,217	./.	./.
chr10	57344426	.	AAC	A	248.42	PASS	AB=0.832;AC=7;AF=0.167;AN=42;BaseQRankSum=4.797;DP=707;FS=5.773;HRun=0;HaplotypeScore=78.3341;InbreedingCoeff=0.4392;MQ=25.80;MQ0=231;MQRankSum=-4.509;QD=2.76;ReadPosRankSum=-2.105;VQSLOD=0.4023;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:15,5:8:11.84:80,12,0	0/0:5,0:3:9.03:0,9,153	./.	./.	0/1:11,6:11:39.11:46,0,39	0/0:15,0:10:9.03:0,9,122	0/0:41,0:21:23.11:0,23,341	0/0:29,0:5:12.04:0,12,198	0/0:15,0:8:3.01:0,3,51	0/0:26,0:7:21.07:0,21,355	./.	0/0:41,0:29:28.56:0,29,447	0/0:39,0:24:30.07:0,30,457	0/0:40,0:33:41.44:0,41,610	0/0:24,0:12:2.99:0,3,35	0/1:17,8:12:26.34:48,0,26	0/0:28,0:22:13.29:0,13,205	1/1:10,5:11:15.05:195,15,0	./.	0/1:13,0:10:0:0,0,0	0/0:69,0:27:24.01:0,24,347	0/0:45,0:37:32.82:0,33,494	0/0:24,0:16:12.04:0,12,171	0/0:55,0:36:39.12:0,39,610	./.	0/0:25,0:6:6.02:0,6,102	./.	./.
chr10	57344486	.	G	GAC	1068.61	PASS	AB=1.000;AC=26;AF=0.542;AN=48;BaseQRankSum=7.226;DP=849;FS=8.881;HRun=0;HaplotypeScore=134.1570;InbreedingCoeff=0.4903;MQ=31.69;MQ0=159;MQRankSum=-4.126;QD=2.52;ReadPosRankSum=0.895;VQSLOD=2.0549;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:40,2:17:2.77:45,3,0	1/1:9,1:6:3.01:50,3,0	./.	./.	0/0:20,2:16:0.47:0,0,1	0/0:24,0:18:14.63:0,15,224	0/0:52,0:41:72:0,72,816	1/1:34,0:5:2.90:16,3,0	1/1:19,0:10:2.59:11,3,0	0/1:21,0:10:21.19:94,0,21	./.	0/0:40,1:34:40.98:0,41,475	0/0:38,0:36:51.12:0,51,611	0/0:51,0:40:50.96:0,51,602	1/1:29,0:12:2.79:13,3,0	1/1:31,1:18:2.15:63,2,0	1/1:23,27:44:24.81:511,25,0	1/1:28,2:22:26.81:310,27,0	./.	0/1:17,0:17:6.18:6,0,10	1/1:81,1:32:10.68:35,11,0	0/0:38,0:32:23.93:0,24,296	0/0:25,0:18:17.78:0,18,198	0/0:61,0:52:84.18:0,84,1043	0/1:9,0:4:0:0,0,0	0/1:26,0:9:6.83:59,0,7	1/1:9,0:4:0.47:1,0,0	1/1:2,0:2:2.50:9,2,0
chr10	57344508	.	CAT	C	32.08	PASS	AB=0.969;AC=7;AF=0.146;AN=48;BaseQRankSum=5.586;DP=838;FS=2.669;HRun=0;HaplotypeScore=150.7400;InbreedingCoeff=0.1261;MQ=33.45;MQ0=140;MQRankSum=-4.416;QD=0.20;ReadPosRankSum=-3.738;VQSLOD=1.8815;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:52,2:23:0.58:0,1,106	0/0:10,1:6:8.18:0,8,79	./.	./.	0/0:32,0:23:8.96:0,9,133	0/0:23,3:21:18.89:0,19,451	0/0:52,0:48:72.10:0,72,1448	0/0:36,0:1:2.99:0,3,23	0/0:13,4:9:2.73:0,3,57	0/1:22,0:9:39.76:40,0,149	./.	0/0:45,1:41:41.89:0,42,1012	0/0:37,2:38:36.67:0,37,1128	0/0:49,3:41:21.62:0,22,850	1/1:23,0:11:1.55:4,2,0	0/0:30,1:17:2.88:0,3,110	0/0:45,9:44:6.50:0,6,670	0/1:33,1:26:46.44:46,0,619	0/0:23,0:2:2.98:0,3,21	0/0:18,2:18:4.23:0,4,61	0/1:67,5:29:3.17:3,0,332	0/0:36,0:27:5.19:0,5,257	0/0:23,0:18:26.97:0,27,402	0/0:60,3:51:95.97:0,96,1658	./.	0/0:34,1:15:18.06:0,18,303	1/1:10,1:7:6.05:44,6,0	0/0:2,0:2:3.01:0,3,47
chr10	57344518	.	CACACACACAG	C	709.26	PASS	AB=0.964;AC=13;AF=0.271;AN=48;BaseQRankSum=4.347;DP=889;FS=10.751;HRun=0;HaplotypeScore=201.7792;InbreedingCoeff=0.5771;MQ=33.64;MQ0=159;MQRankSum=-4.680;QD=3.58;ReadPosRankSum=-2.053;VQSLOD=1.4603;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:60,0:27:14.04:0,14,347	0/0:8,0:5:9.03:0,9,174	./.	./.	0/0:36,0:26:8.72:0,9,389	0/0:23,0:18:30.07:0,30,827	0/0:54,0:50:90.13:0,90,2507	0/0:62,0:1:3.01:0,3,93	0/1:18,1:10:0.09:0,0,0	0/1:22,1:11:31.71:313,0,32	./.	0/0:44,0:41:69.75:0,70,2578	0/0:47,0:45:93.17:0,93,2346	0/0:60,0:50:80.70:0,81,2386	1/1:22,2:12:5.78:36,6,0	0/0:35,0:19:11.89:0,12,389	0/0:56,0:47:53.07:0,53,1207	0/0:37,0:28:60.17:0,60,1642	1/1:32,0:2:3.01:37,3,0	0/0:17,2:15:2.82:0,3,102	0/1:55,1:24:1.76:2,0,6	0/0:36,0:27:23.79:0,24,636	0/0:24,0:20:27.08:0,27,832	0/0:62,0:53:90:0,90,2514	./.	1/1:20,11:13:10.01:177,10,0	1/1:9,2:9:9.03:247,9,0	1/1:1,1:2:3.01:38,3,0
chr10	57344618	.	CAA	C	208.50	PASS	AB=0.904;AC=5;AF=0.096;AN=52;BaseQRankSum=1.427;DP=831;FS=6.208;HRun=3;HaplotypeScore=135.1947;InbreedingCoeff=0.2735;MQ=34.57;MQ0=178;MQRankSum=-0.193;QD=2.19;ReadPosRankSum=0.106;VQSLOD=-0.6502;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:40,1:25:40.65:0,41,466	0/1:4,1:4:20.91:21,0,49	./.	./.	0/0:22,0:13:23.28:0,23,228	0/0:20,0:15:33.50:0,33,532	0/0:37,1:31:51.85:0,52,900	0/1:15,1:5:5.72:67,0,6	0/0:23,0:17:33.95:0,34,416	0/0:31,0:22:51.07:0,51,825	0/0:10,0:8:11.06:0,11,50	0/0:28,0:22:27.97:0,28,415	0/0:33,0:24:54:0,54,779	0/0:37,1:32:75.02:0,75,968	0/1:41,3:28:2.82:3,0,288	0/0:25,0:16:26.84:0,27,201	1/1:24,6:20:1.40:219,1,0	0/0:27,0:21:26.65:0,27,513	0/0:59,0:12:24.05:0,24,369	0/0:25,2:22:43.69:0,44,457	0/0:85,0:54:97.31:0,97,1520	0/0:25,0:19:30.08:0,30,343	0/0:22,0:13:17.23:0,17,226	0/0:69,0:57:89.38:0,89,1394	0/0:25,0:17:10.34:0,10,363	0/0:38,0:20:37.10:0,37,724	0/0:11,0:8:21.02:0,21,305	0/0:6,0:5:15.01:0,15,251
chr10	57344670	.	CAG	C	252.50	PASS	AB=0.998;AC=19;AF=0.365;AN=52;BaseQRankSum=6.162;DP=1113;FS=0.518;HRun=0;HaplotypeScore=164.1831;InbreedingCoeff=-0.1079;MQ=29.50;MQ0=280;MQRankSum=-3.634;QD=0.37;ReadPosRankSum=-0.630;VQSLOD=2.2870;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:59,0:33:13.56:14,0,19	0/1:19,0:11:3.15:3,0,37	./.	./.	1/1:21,0:13:7.07:36,7,0	0/0:35,0:22:30.08:0,30,594	0/0:59,0:33:35.43:0,35,413	0/1:80,0:28:4.99:5,0,475	1/1:34,0:19:11.54:61,12,0	0/1:62,0:27:99:131,0,255	1/1:16,0:10:0.47:1,0,0	0/0:41,0:27:8.14:0,8,249	0/0:39,0:30:15.63:0,16,376	0/1:56,0:37:12.35:12,0,516	0/0:40,0:19:1.95:0,2,6	0/1:46,1:22:27.08:27,0,110	0/0:48,0:37:14.37:0,14,370	0/1:46,0:32:11.73:12,0,636	0/1:28,0:4:6.71:7,0,20	0/1:32,0:20:6.59:7,0,19	0/1:95,1:44:12.08:12,0,201	0/0:39,0:26:2.79:0,3,224	0/0:23,3:15:15.01:0,15,207	0/0:80,0:61:83.74:0,84,1595	0/1:35,0:18:0.12:0,0,152	0/1:43,0:21:41.27:41,0,229	0/0:20,0:12:10.95:0,11,54	0/1:12,0:10:18.59:29,0,19
chr10	57344672	.	GAC	G	827.95	PASS	AB=0.974;AC=18;AF=0.346;AN=52;BaseQRankSum=0.376;DP=1111;FS=30.741;HRun=0;HaplotypeScore=165.2277;InbreedingCoeff=0.2391;MQ=29.26;MQ0=280;MQRankSum=-5.702;QD=1.61;ReadPosRankSum=0.541;VQSLOD=0.7586;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:62,0:36:1.34:0,1,3	0/0:19,0:11:6.49:0,6,85	./.	./.	0/1:22,0:13:0:0,0,0	0/0:34,0:22:30.09:0,30,457	0/0:60,0:34:21.02:0,21,250	0/1:72,7:27:99:172,0,298	1/1:35,0:20:12.08:136,12,0	0/1:55,5:26:99:270,0,110	1/1:14,2:10:0.47:1,0,0	0/1:42,0:28:4.23:4,0,258	0/0:41,0:32:35.36:0,35,382	0/0:54,0:34:11.07:0,11,519	0/0:39,1:19:2.04:0,2,6	0/0:47,0:22:17.16:0,17,184	0/0:48,0:37:28.20:0,28,357	0/0:46,0:32:48.58:0,49,607	1/1:28,0:4:8.98:81,9,0	1/1:30,1:19:2.89:36,3,0	0/1:91,0:40:62.47:62,0,87	0/0:41,0:28:22.54:0,23,256	0/0:26,0:15:15.02:0,15,210	0/0:80,0:61:92.84:0,93,1371	0/1:34,0:17:24.84:25,0,115	0/1:37,2:19:99:137,0,120	1/1:20,0:13:2.43:21,2,0	0/1:11,0:9:3.35:32,0,3
chr10	57344682	.	C	CACAG	1575.64	PASS	AB=0.977;AC=19;AF=0.365;AN=52;BaseQRankSum=2.722;DP=1106;FS=33.757;HRun=0;HaplotypeScore=187.4308;InbreedingCoeff=0.2004;MQ=29.63;MQ0=267;MQRankSum=-5.996;QD=2.68;ReadPosRankSum=-1.686;VQSLOD=1.3195;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:62,0:38:9.47:9,0,46	0/0:19,0:11:7.27:0,7,85	./.	./.	0/0:24,0:15:0.86:0,1,9	0/0:31,0:18:30.56:0,31,509	0/0:61,0:36:29.96:0,30,363	0/1:79,0:26:99:123,0,381	1/1:36,0:23:19.72:195,20,0	0/1:51,2:24:99:513,0,149	1/1:16,1:13:5.30:54,5,0	0/0:46,0:32:39.27:0,39,454	0/0:37,0:30:41.87:0,42,564	0/0:51,0:32:59.39:0,59,816	1/1:34,1:18:5.91:64,6,0	0/1:46,0:21:3.43:3,0,83	0/0:53,0:41:13.55:0,14,419	0/0:46,0:32:23.03:0,23,598	0/1:28,0:6:5.85:106,0,6	0/1:31,3:21:6.71:7,0,18	0/1:89,0:35:68.97:69,0,99	0/0:46,0:33:29.31:0,29,371	0/0:26,0:18:21.01:0,21,289	0/0:78,0:61:99:0,102,1646	0/1:33,1:17:24.86:25,0,158	0/1:36,1:19:99:299,0,154	1/1:21,1:13:6.02:120,6,0	1/1:9,1:8:9.65:154,10,0
chr10	57344684	.	C	CAG	625.51	PASS	AB=0.985;AC=16;AF=0.308;AN=52;BaseQRankSum=2.327;DP=1101;FS=19.454;HRun=0;HaplotypeScore=177.6822;InbreedingCoeff=-0.2949;MQ=29.48;MQ0=266;MQRankSum=-4.709;QD=0.95;ReadPosRankSum=0.018;VQSLOD=1.5063;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:63,0:37:28.87:29,0,51	0/0:20,0:12:7.22:0,7,47	./.	./.	0/1:24,0:15:13.02:19,0,13	0/0:32,0:19:33.52:0,34,454	0/0:59,0:34:32.93:0,33,342	0/1:79,0:25:99:110,0,303	0/1:37,1:23:7.44:58,0,7	0/1:52,1:25:99:230,0,226	0/0:17,0:13:3.63:0,4,14	0/0:48,0:34:41.89:0,42,436	0/0:36,0:29:44.84:0,45,532	0/0:50,0:31:59.49:0,59,742	0/0:34,0:17:2.23:0,2,14	0/1:43,2:21:18.08:18,0,45	0/1:50,3:41:23.05:23,0,215	0/1:43,2:31:15.28:15,0,484	0/1:30,0:7:23.70:83,0,24	0/1:33,0:21:6.83:7,0,19	0/1:87,0:34:35.38:35,0,85	0/0:45,0:32:32.97:0,33,366	0/0:26,0:18:21.01:0,21,253	0/0:79,0:62:99:0,108,1430	0/1:33,1:17:24.99:25,0,115	0/1:39,0:21:88.85:89,0,149	1/1:21,0:13:1.09:28,1,0	0/1:10,0:8:0.47:0,0,27
chr10	57344688	.	G	GAC	1059.23	PASS	AB=0.969;AC=25;AF=0.481;AN=52;BaseQRankSum=7.604;DP=1075;FS=10.567;HRun=0;HaplotypeScore=176.2687;InbreedingCoeff=0.2983;MQ=29.60;MQ0=259;MQRankSum=-5.150;QD=1.57;ReadPosRankSum=-1.784;VQSLOD=1.4974;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:63,0:37:3.03:50,0,3	1/1:16,4:13:6.49:101,6,0	./.	./.	1/1:23,0:14:3.63:10,4,0	0/0:28,0:16:17.84:0,18,215	0/0:55,0:30:23.36:0,23,240	0/1:71,0:20:26.50:26,0,33	1/1:38,0:23:12.55:83,13,0	0/1:50,0:23:99:160,0,100	1/1:17,0:13:5.64:52,6,0	0/0:51,0:37:44.43:0,44,487	0/0:37,0:30:44.29:0,44,445	0/0:54,0:35:54.76:0,55,523	1/1:34,0:16:5.80:40,6,0	0/1:43,0:23:1.21:27,0,1	0/1:36,12:40:99:431,0,138	0/1:42,0:30:37.41:37,0,321	1/1:31,0:7:9.03:44,9,0	0/1:32,0:22:0:0,0,0	0/1:81,2:30:16.37:16,0,67	0/0:41,0:31:28.65:0,29,317	0/0:23,0:16:21.01:0,21,247	0/0:78,0:61:82.57:0,83,977	0/0:34,0:17:8.92:0,9,114	0/1:38,0:21:53.18:53,0,105	1/1:19,0:11:3.87:25,4,0	1/1:10,0:8:12.89:75,13,0
chr10	57344704	.	C	CAG	539.43	PASS	AB=0.984;AC=13;AF=0.232;AN=56;BaseQRankSum=6.677;DP=1063;FS=7.701;HRun=0;HaplotypeScore=175.7388;InbreedingCoeff=0.0941;MQ=31.02;MQ0=218;MQRankSum=-4.347;QD=1.46;ReadPosRankSum=1.321;VQSLOD=2.2341;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:37:21.84:0,22,187	0/0:20,0:14:4.48:0,4,12	0/1:9,0:2:6.09:6,0,9	0/0:20,0:4:5.89:0,6,41	0/0:25,0:18:5.99:0,6,57	0/0:29,0:17:29.90:0,30,426	0/0:57,0:36:48.05:0,48,615	0/0:49,0:9:16.82:0,17,133	0/1:34,3:24:1.39:111,0,1	0/1:48,1:24:99:153,0,115	1/1:17,2:15:5.75:75,6,0	0/0:47,0:35:54.18:0,54,819	0/0:37,0:30:50.68:0,51,688	0/0:49,0:33:65.64:0,66,950	1/1:31,2:17:6.02:79,6,0	0/1:40,0:26:12.19:27,0,12	0/0:50,0:40:17.47:0,17,227	0/0:44,0:31:11.83:0,12,275	0/1:29,0:10:8.38:8,0,159	0/0:37,0:27:5.78:0,6,49	0/1:77,2:33:25.60:26,0,121	0/0:44,0:36:45.89:0,46,550	0/0:24,0:19:36.11:0,36,524	0/0:65,0:51:86.94:0,87,1208	0/0:36,0:18:8.86:0,9,112	0/1:41,0:29:52.07:52,0,299	0/1:21,0:13:9.47:9,0,22	0/1:10,0:8:16.08:144,0,16
chr10	57344714	.	GACAC	G	4261.18	PASS	AB=0.863;AC=25;AF=0.446;AN=56;BaseQRankSum=4.705;DP=1023;FS=0.467;HRun=0;HaplotypeScore=187.3242;InbreedingCoeff=0.4974;MQ=33.70;MQ0=160;MQRankSum=-4.414;QD=7.60;ReadPosRankSum=0.196;VQSLOD=3.4319;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:36:18.16:0,18,213	1/1:14,8:16:5.11:98,5,0	0/0:24,0:7:21.06:0,21,298	0/0:30,0:10:21.27:0,21,173	0/0:29,0:24:11.56:0,12,81	0/0:27,0:17:7.12:0,7,477	0/0:53,0:34:48.12:0,48,1068	0/1:38,0:10:0.04:159,0,0	1/1:30,4:23:24.55:379,25,0	0/1:40,6:26:22.82:546,0,23	1/1:12,5:14:6.49:91,6,0	0/0:39,0:33:59.86:0,60,1333	0/0:33,0:29:42.53:0,43,986	0/0:47,0:34:69.52:0,70,1424	1/1:31,5:20:6.02:98,6,0	1/1:35,3:25:17.94:224,18,0	0/1:36,11:40:12.71:529,0,13	0/1:39,1:31:25.68:231,0,26	1/1:17,9:14:17.42:325,17,0	1/1:35,3:29:20.70:294,21,0	0/1:70,2:35:95.70:196,0,96	0/0:41,0:36:47.90:0,48,920	0/0:25,0:22:45.15:0,45,993	0/0:54,0:47:65.66:0,66,1260	0/1:27,10:20:0:0,0,0	0/1:16,24:34:16.23:829,0,16	1/1:10,10:14:5.79:82,6,0	1/1:7,1:7:12.04:180,12,0
chr10	57346198	.	C	CT	999.82	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-2.991;DP=547;FS=5.168;HRun=9;HaplotypeScore=237.5474;InbreedingCoeff=0.9881;MQ=66.76;MQ0=0;MQRankSum=-3.198;QD=18.52;ReadPosRankSum=-3.614;VQSLOD=0.1178;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:50.66:0,51,410	1/1:1,7:8:18.05:199,18,0	0/0:11,0:12:15.48:0,15,176	0/0:11,0:11:29.93:0,30,248	0/0:31,0:31:56.91:0,57,488	0/0:15,0:14:26.95:0,27,230	0/0:16,0:16:35.89:0,36,301	1/1:14,13:27:50.73:540,51,0	0/0:15,0:15:44.92:0,45,382	0/0:24,0:24:53.96:0,54,466	0/0:22,0:22:38.91:0,39,331	0/0:25,0:25:38.90:0,39,334	0/0:20,0:20:56.99:0,57,495	0/0:26,0:26:50.94:0,51,440	0/0:19,0:19:47.96:0,48,414	0/0:22,0:22:50.96:0,51,443	1/1:9,10:19:41.95:403,42,0	0/0:13,0:13:29.97:0,30,260	0/0:13,0:13:29.96:0,30,253	0/0:19,0:19:29.94:0,30,260	0/0:16,0:16:23.73:0,24,176	0/0:27,0:27:53.86:0,54,455	0/0:26,0:26:53.70:0,54,451	0/0:22,0:22:47.78:0,48,397	0/0:14,0:14:32.71:0,33,268	0/0:26,0:26:62.91:0,63,539	0/0:21,0:21:56.97:0,57,494	0/0:7,0:7:20.03:0,20,162
chr10	57348935	.	C	CTT	1457.06	PASS	AB=0.911;AC=29;AF=0.518;AN=56;BaseQRankSum=5.724;DP=419;FS=6.329;HRun=14;HaplotypeScore=100.6126;InbreedingCoeff=0.6108;MQ=60.67;MQ0=0;MQRankSum=-5.108;QD=5.56;ReadPosRankSum=-2.535;VQSLOD=0.0692;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:20:20.24:0,20,174	1/1:5,9:14:13.47:140,13,0	0/0:9,0:6:8.07:0,8,45	0/0:9,0:10:5.33:0,5,23	0/0:12,0:14:12.45:0,12,96	0/1:11,0:11:3.22:3,0,129	0/1:16,0:18:3.66:4,0,116	1/1:8,11:21:33.04:388,33,0	1/1:11,0:11:2.98:22,3,0	1/1:12,0:10:6.01:60,6,0	1/1:13,0:13:18.01:166,18,0	0/0:13,0:13:7.28:0,7,73	0/0:10,0:11:8.36:0,8,62	0/0:9,0:9:5.76:0,6,50	1/1:9,0:8:9.43:71,9,0	0/0:12,0:12:8.37:0,8,74	0/1:12,16:30:10.22:112,0,10	0/0:20,0:24:28.94:0,29,291	1/1:14,0:14:6:54,6,0	1/1:14,0:13:18.72:138,19,0	0/1:8,0:8:0:0,0,0	0/0:14,0:15:23.62:0,24,194	0/0:18,0:18:35.72:0,36,300	0/1:27,0:33:3.39:3,0,196	1/1:16,0:16:17.61:118,18,0	1/1:14,0:13:14.58:134,15,0	1/1:12,0:11:18.25:156,18,0	1/1:12,0:11:9:80,9,0
chr10	57350049	.	G	GCCCTAGGGT	26001.57	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-5.714;DP=570;FS=4.998;HRun=0;HaplotypeScore=153.0997;InbreedingCoeff=0.9831;MQ=85.08;MQ0=0;MQRankSum=-16.865;QD=98.12;ReadPosRankSum=-4.026;VQSLOD=4.2676;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,105,3250	1/1:1,3:8:5.69:227,6,0	0/0:18,0:18:51.16:0,51,1215	0/0:34,0:33:78.59:0,79,1743	0/0:15,0:15:45.15:0,45,1295	0/0:23,0:23:46.22:0,46,1886	0/0:19,0:19:57.20:0,57,1765	1/1:5,4:17:48.15:1935,48,0	1/1:3,13:22:44.88:2041,45,0	1/1:20,9:29:78.26:3184,78,0	1/1:0,8:14:21.07:979,21,0	0/0:28,0:28:81.26:0,81,2424	0/0:19,0:19:57.20:0,57,1731	0/0:16,0:16:45.15:0,45,1309	1/1:8,9:17:48.15:2079,48,0	0/0:15,0:15:39.12:0,39,1141	1/1:15,10:26:66.14:2814,66,0	0/0:25,0:25:75.26:0,75,2182	1/1:18,3:21:51.06:1256,51,0	1/1:2,18:24:57.20:2769,57,0	1/1:13,3:16:33.04:1060,33,0	0/0:18,0:18:54.18:0,54,1558	0/0:14,0:14:33.10:0,33,910	0/0:24,0:24:72.25:0,72,2146	1/1:2,13:16:42.14:1930,42,0	1/1:2,15:23:69.20:2725,69,0	1/1:6,15:23:45.15:2122,45,0	1/1:3,4:9:18.06:880,18,0
chr10	57350139	.	GAAA	G	4733.39	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=5.690;DP=534;FS=2.823;HRun=14;HaplotypeScore=88.8299;InbreedingCoeff=0.9014;MQ=65.47;MQ0=10;MQRankSum=-3.215;QD=19.72;ReadPosRankSum=3.948;VQSLOD=4.2646;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:39:99:0,105,1752	1/1:4,2:6:5.94:70,6,0	0/1:29,0:9:12.34:12,0,181	0/0:34,0:22:27.44:0,27,336	0/0:21,0:23:46.37:0,46,750	0/0:16,0:18:33.10:0,33,575	0/0:21,0:21:54.14:0,54,912	1/1:7,12:19:32.96:375,33,0	1/1:4,6:12:29.89:298,30,0	1/1:4,17:21:54.07:604,54,0	1/1:4,5:10:10.29:137,10,0	0/0:11,0:13:30.10:0,30,530	0/0:11,0:11:27.09:0,27,445	0/0:20,0:24:64.35:0,64,955	1/1:2,19:21:48.13:561,48,0	0/0:15,0:20:53.64:0,54,877	1/1:4,17:22:44.96:483,45,0	0/0:39,0:40:99:0,108,1850	1/1:4,10:15:25.55:313,26,0	1/1:1,10:11:27.04:316,27,0	1/1:5,7:15:14.99:171,15,0	0/0:14,0:14:33.07:0,33,554	0/0:11,0:16:41.71:0,42,654	0/0:17,0:19:51.15:0,51,898	1/1:4,9:12:24:265,24,0	1/1:4,7:12:26.97:298,27,0	1/1:1,13:16:41.97:456,42,0	1/1:3,13:16:9.62:374,10,0
chr10	57351822	.	A	AAGACAGAC	22898.44	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-11.793;DP=774;FS=2.716;HRun=0;HaplotypeScore=171.0984;InbreedingCoeff=0.9820;MQ=62.97;MQ0=3;MQRankSum=-16.003;QD=60.26;ReadPosRankSum=-0.203;VQSLOD=4.5376;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,147,3644	1/1:5,7:12:9.03:376,9,0	0/0:30,0:28:23.63:0,24,997	0/0:32,0:31:62.86:0,63,1335	0/0:18,0:18:33.11:0,33,689	0/0:22,0:22:60.17:0,60,1357	0/0:33,0:33:93.26:0,93,2133	1/1:18,16:36:60.11:1499,60,0	1/1:5,23:30:54.19:2292,54,0	1/1:15,16:34:72.19:2558,72,0	1/1:4,16:20:24.08:1008,24,0	0/0:30,0:30:84.25:0,84,2028	0/0:22,0:22:57.20:0,57,1491	0/0:25,0:25:60.21:0,60,1503	1/1:6,33:42:87.30:3689,87,0	0/0:28,0:28:66.23:0,66,1737	1/1:6,12:18:24.08:1006,24,0	0/0:37,0:37:96.31:0,96,2389	1/1:11,21:28:62.21:1800,62,0	1/1:11,20:34:39.13:1626,39,0	1/1:12,11:26:9.03:357,9,0	0/0:19,0:19:42.12:0,42,947	0/0:21,0:21:57.15:0,57,1386	0/0:21,0:21:56.24:0,56,1395	1/1:2,13:16:27.09:1149,27,0	1/1:11,22:34:78.11:2547,78,0	1/1:6,29:36:56.73:2237,57,0	1/1:2,6:8:18.06:754,18,0
chr10	57352590	.	A	AAAAAG	1263.89	PASS	AB=0.963;AC=7;AF=0.125;AN=56;BaseQRankSum=-3.756;DP=613;FS=13.376;HRun=0;HaplotypeScore=140.4394;InbreedingCoeff=0.8062;MQ=71.82;MQ0=1;MQRankSum=-0.037;QD=18.06;ReadPosRankSum=-1.188;VQSLOD=2.2711;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:93.32:0,93,1700	1/1:4,4:8:15.05:380,15,0	0/0:34,0:21:12.04:0,12,208	0/1:25,0:23:28.84:29,0,205	0/0:17,0:17:39.11:0,39,651	0/0:20,0:20:46.37:0,46,769	0/0:24,0:24:54.19:0,54,997	1/1:12,4:18:21.06:381,21,0	0/0:24,0:24:42.13:0,42,735	0/0:36,0:36:78.26:0,78,1409	0/0:12,0:12:33.11:0,33,613	0/0:13,0:13:24.08:0,24,446	0/0:22,0:22:42.13:0,42,741	0/0:15,0:15:21:0,21,361	0/0:32,0:32:63.20:0,63,1094	0/0:24,0:24:54.18:0,54,962	1/1:11,7:18:23.39:620,23,0	0/0:31,0:31:69.21:0,69,1239	0/0:28,0:28:63.17:0,63,983	0/0:28,0:28:60.19:0,60,1084	0/0:22,0:22:42.14:0,42,749	0/0:12,0:12:21.07:0,21,355	0/0:18,0:18:12.04:0,12,223	0/0:33,0:33:84.24:0,84,1448	0/0:16,0:16:27.09:0,27,496	0/0:15,0:15:21.06:0,21,359	0/0:19,0:19:42.12:0,42,700	0/0:7,0:7:18.06:0,18,291
chr10	57352741	.	AAAG	A	1797.14	PASS	AB=0.986;AC=17;AF=0.304;AN=56;BaseQRankSum=10.405;DP=586;FS=2.936;HRun=0;HaplotypeScore=112.8418;InbreedingCoeff=0.0629;MQ=55.69;MQ0=7;MQRankSum=0.617;QD=6.42;ReadPosRankSum=2.878;VQSLOD=2.6731;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:97.04:0,97,713	0/1:10,1:11:17.05:113,0,17	0/0:19,0:10:7.96:0,8,195	0/0:13,0:8:1.54:0,2,113	0/0:18,0:18:29.15:0,29,290	0/0:22,0:22:59.92:0,60,805	0/0:27,0:26:71.07:0,71,865	0/1:29,1:30:65.80:230,0,66	1/1:23,0:23:13.99:228,14,0	0/1:22,0:21:67.61:99,0,68	0/1:18,0:17:15.46:107,0,15	0/0:12,0:12:29.71:0,30,294	0/0:15,0:15:23.72:0,24,359	0/0:11,0:11:22.33:0,22,260	0/1:27,0:26:2.15:157,0,2	0/0:17,0:17:34.31:0,34,256	1/1:26,1:27:6.95:224,7,0	0/0:25,0:25:41.39:0,41,307	0/1:23,0:21:40.80:137,0,41	0/1:21,0:21:10.98:159,0,11	0/1:15,0:15:51.77:52,0,87	0/0:24,0:24:67.98:0,68,793	0/0:10,0:10:26.89:0,27,288	0/0:50,0:50:99:0,119,1827	0/1:27,1:27:54.52:231,0,55	0/1:11,0:11:4.87:96,0,5	0/1:23,0:23:66.65:114,0,67	1/1:1,0:1:2.92:17,3,0
chr10	57352744	.	GAAA	G	5529.22	PASS	AB=0.654;AC=27;AF=0.482;AN=56;BaseQRankSum=0.876;DP=598;FS=13.708;HRun=14;HaplotypeScore=101.8673;InbreedingCoeff=0.8911;MQ=56.77;MQ0=6;MQRankSum=-1.117;QD=19.82;ReadPosRankSum=2.823;VQSLOD=2.3611;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:43:89.18:0,89,703	1/1:4,7:11:21.02:244,21,0	0/0:24,0:11:7.84:0,8,214	0/0:13,0:8:18.01:0,18,247	0/0:13,0:19:26.83:0,27,235	0/0:24,0:24:63.05:0,63,888	0/0:24,0:26:63.13:0,63,1030	1/1:11,16:30:27.94:441,28,0	1/1:4,12:20:46.23:473,46,0	1/1:5,15:20:42.05:488,42,0	1/1:4,13:16:29.70:311,30,0	0/0:14,0:14:33.01:0,33,462	0/0:15,0:17:36.58:0,37,571	0/0:11,0:12:30.07:0,30,446	1/1:3,21:25:47.94:525,48,0	0/0:9,0:18:37.09:0,37,276	1/1:5,22:27:52.12:627,52,0	0/0:9,0:26:44.37:0,44,347	1/1:5,19:24:48.16:560,48,0	1/1:3,16:20:41.67:463,42,0	0/1:8,9:17:43.82:143,0,44	0/0:21,0:25:60.08:0,60,919	0/0:9,0:9:21.07:0,21,348	0/0:47,0:48:99:0,120,2093	1/1:8,20:28:21.38:497,21,0	1/1:2,10:12:29.38:311,29,0	1/1:6,17:23:36.01:412,36,0	1/1:0,1:1:3.01:35,3,0
chr10	57353408	.	G	GC	12713.75	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-14.959;DP=681;FS=0.284;HRun=1;HaplotypeScore=63.9466;InbreedingCoeff=0.9986;MQ=93.56;MQ0=0;MQRankSum=-2.577;QD=40.36;ReadPosRankSum=2.665;VQSLOD=5.4670;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,144,1800	1/1:0,7:7:18.06:270,18,0	0/0:37,0:38:78.84:0,79,1251	0/0:27,0:27:74.35:0,74,928	0/0:21,0:21:60.19:0,60,776	0/0:22,0:22:66.21:0,66,857	0/0:29,0:29:87.27:0,87,1117	1/1:3,31:34:90.30:1349,90,0	1/1:0,16:16:42.14:623,42,0	1/1:1,14:15:42.14:624,42,0	1/1:0,17:17:48.16:719,48,0	0/0:23,0:22:66.21:0,66,856	0/0:16,0:16:48.16:0,48,623	0/0:23,0:23:69.21:0,69,882	1/1:0,26:26:75.25:1117,75,0	0/0:28,0:28:84.21:0,84,1056	1/1:2,30:31:84.28:1259,84,0	0/0:20,0:20:60.15:0,60,747	1/1:0,25:25:75.19:1045,75,0	1/1:0,11:11:33.11:494,33,0	1/1:1,61:62:99:2518,169,0	0/0:19,0:19:57.17:0,57,726	0/0:17,0:17:51.17:0,51,659	0/0:34,0:34:99:0,102,1324	1/1:0,17:18:36.12:539,36,0	1/1:1,24:25:72.24:1078,72,0	1/1:1,18:19:48.16:719,48,0	1/1:0,8:8:24.08:359,24,0
chr10	57353522	.	GCACACACACA	G	983.66	PASS	AB=0.923;AC=19;AF=0.500;AN=38;BaseQRankSum=3.007;DP=512;FS=0.000;HRun=0;HaplotypeScore=142.7861;InbreedingCoeff=0.5852;MQ=68.45;MQ0=12;MQRankSum=-3.969;QD=5.86;ReadPosRankSum=0.098;VQSLOD=2.1088;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	1/1:7,0:8:6.02:139,6,0	0/0:15,0:17:12.51:0,13,206	0/0:19,0:20:8.62:0,9,165	./.	./.	1/1:21,0:22:2.79:70,3,0	0/0:11,2:13:0:0,0,0	0/0:19,0:19:3.01:0,3,48	0/0:11,0:11:12.04:0,12,412	0/0:14,0:13:15.05:0,15,446	1/1:19,4:24:12.04:333,12,0	1/1:13,4:16:6.01:176,6,0	1/1:18,0:21:6.02:139,6,0	./.	./.	1/1:10,1:11:3.01:88,3,0	./.	0/0:18,0:21:8.62:0,9,93	0/0:15,0:15:3.48:0,3,75	0/0:32,0:39:26.64:0,27,374	0/1:11,0:12:0:0,0,0	1/1:26,0:26:3:27,3,0	1/1:18,0:19:5.23:77,5,0	1/1:4,0:4:3.01:70,3,0
chr10	57354298	.	C	CAGAGAGGGTGA	47501.50	PASS	AB=0.929;AC=29;AF=0.518;AN=56;BaseQRankSum=0.306;DP=717;FS=5.641;HRun=0;HaplotypeScore=229.0164;InbreedingCoeff=0.9270;MQ=79.48;MQ0=0;MQRankSum=-21.321;QD=128.04;ReadPosRankSum=-2.477;VQSLOD=3.9105;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,126,4263	1/1:2,9:12:33.11:1898,33,0	0/0:22,0:22:46.06:0,46,1670	0/0:30,0:30:78.23:0,78,2646	0/0:25,0:25:69.24:0,69,2355	0/0:23,0:23:66.21:0,66,2174	0/0:24,0:24:69.24:0,69,2357	1/1:36,10:47:99:6607,132,0	1/1:12,16:32:84.29:4323,84,0	1/1:11,13:26:78.27:4378,78,0	1/1:2,7:10:23.26:1351,23,0	0/0:32,0:32:90.31:0,90,3123	0/0:32,0:32:93.32:0,93,3280	0/0:25,0:25:75.26:0,75,2674	1/1:14,26:43:99:5701,112,0	0/1:24,2:26:99:276,0,2143	1/1:17,7:26:60.21:3095,60,0	0/0:29,0:29:87.28:0,87,2736	1/1:16,5:24:63.20:3069,63,0	1/1:11,9:20:57.15:2813,57,0	1/1:11,11:25:54.19:2933,54,0	0/0:12,0:12:33.11:0,33,1175	0/0:18,0:18:48.16:0,48,1711	0/0:31,0:31:90.27:0,90,3042	1/1:9,9:18:45.12:2030,45,0	1/1:14,14:29:84.25:4552,84,0	1/1:12,14:27:66.23:3567,66,0	1/1:3,3:6:18.06:907,18,0
chr10	57355392	.	G	GGGCC	6529.43	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-12.207;DP=601;FS=5.416;HRun=0;HaplotypeScore=94.4649;InbreedingCoeff=0.9990;MQ=85.79;MQ0=1;MQRankSum=-6.636;QD=56.29;ReadPosRankSum=1.862;VQSLOD=6.0362;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,111,1881	1/1:1,11:13:27.09:696,27,0	0/0:17,0:17:51.15:0,51,863	0/0:26,0:26:59:0,59,992	0/0:17,0:17:45.14:0,45,809	0/0:22,0:22:66.21:0,66,1201	0/0:21,0:21:60.14:0,60,967	1/1:0,20:21:60.11:1405,60,0	0/0:16,0:16:45.15:0,45,829	0/0:27,0:27:78.19:0,78,1383	0/0:12,0:12:36.12:0,36,644	0/0:23,0:23:60.21:0,60,1091	0/0:13,0:13:39.12:0,39,697	0/0:18,0:18:51.17:0,51,952	0/0:21,0:21:60.19:0,60,1088	1/1:5,6:15:24.03:555,24,0	1/1:2,30:33:81.28:2116,81,0	1/1:2,30:31:66.23:1758,66,0	0/0:21,0:21:54.17:0,54,925	0/0:17,0:17:42.12:0,42,716	0/0:43,0:43:99:0,126,2207	0/0:17,0:17:42.14:0,42,770	0/0:14,0:14:42.14:0,42,779	0/0:19,0:19:57.18:0,57,1033	0/0:21,0:21:60.21:0,60,1106	0/0:22,0:22:63.21:0,63,1131	0/0:25,0:25:72.25:0,72,1343	0/0:11,0:11:27.08:0,27,471
chr10	57355939	.	GC	G	999.73	PASS	AB=0.909;AC=7;AF=0.125;AN=56;BaseQRankSum=1.869;DP=385;FS=5.425;HRun=5;HaplotypeScore=68.4413;InbreedingCoeff=0.8714;MQ=78.46;MQ0=0;MQRankSum=-3.673;QD=17.85;ReadPosRankSum=-2.511;VQSLOD=2.8901;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:57.19:0,57,778	1/1:1,4:5:9.02:102,9,0	0/1:9,1:10:1.20:1,0,197	0/0:20,0:19:47.88:0,48,473	0/0:13,0:13:36.10:0,36,474	0/0:17,0:17:39.13:0,39,533	0/0:20,0:20:54.17:0,54,718	1/1:4,21:25:57.11:629,57,0	0/0:12,0:12:27.08:0,27,354	0/0:9,0:9:27.03:0,27,311	0/0:9,0:9:24.06:0,24,311	0/0:11,0:11:24.07:0,24,310	0/0:11,0:11:27.07:0,27,367	0/0:12,0:12:36.08:0,36,469	0/0:15,0:15:45.14:0,45,600	0/0:13,0:13:36.12:0,36,492	1/1:1,15:16:36.10:405,36,0	0/0:13,0:13:39.13:0,39,531	0/0:7,0:7:18.06:0,18,246	0/0:7,0:7:21.04:0,21,255	0/0:19,0:19:51.17:0,51,697	0/0:9,0:9:24.08:0,24,327	0/0:10,0:10:30.06:0,30,387	0/0:29,0:29:78.24:0,78,1028	0/0:10,0:10:27.09:0,27,368	0/0:20,0:20:53.84:0,54,693	0/0:12,0:12:36.12:0,36,490	0/0:7,0:7:18.06:0,18,245
chr10	57355965	.	TAAC	T	4577.46	PASS	AB=0.667;AC=27;AF=0.482;AN=56;BaseQRankSum=6.963;DP=403;FS=26.801;HRun=0;HaplotypeScore=78.2609;InbreedingCoeff=0.9352;MQ=71.27;MQ0=0;MQRankSum=-1.759;QD=25.72;ReadPosRankSum=1.641;VQSLOD=2.7423;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:31:48.16:0,48,628	0/1:2,0:4:0.01:0,0,0	0/0:11,0:9:9.03:0,9,161	0/0:18,0:20:19.32:0,19,336	0/0:5,0:17:42.14:0,42,621	0/0:21,0:21:33.11:0,33,658	0/0:17,0:17:45.10:0,45,824	1/1:14,0:17:8.93:63,9,0	1/1:4,7:11:15.05:209,15,0	1/1:3,12:15:36.12:502,36,0	1/1:2,9:11:27.09:376,27,0	0/0:8,0:8:12.01:0,12,200	0/0:11,0:11:15.04:0,15,261	0/0:14,0:14:24.07:0,24,443	1/1:5,11:16:27.09:376,27,0	0/0:15,0:15:36.12:0,36,718	1/1:4,0:11:20.83:147,21,0	0/0:15,0:15:30.10:0,30,595	1/1:2,4:6:12.04:167,12,0	1/1:2,9:11:24.08:335,24,0	1/1:4,12:16:30.10:418,30,0	0/0:10,0:10:18.06:0,18,358	0/0:12,0:12:33.11:0,33,653	0/0:23,0:23:42.14:0,42,831	1/1:2,12:14:30.06:396,30,0	1/1:3,22:25:63.21:877,63,0	1/1:1,16:17:42.14:585,42,0	1/1:0,4:4:9.03:125,9,0
chr10	57356091	.	T	TC	616.41	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=4.396;DP=516;FS=6.756;HRun=0;HaplotypeScore=60.7048;InbreedingCoeff=0.8840;MQ=48.86;MQ0=84;MQRankSum=-1.953;QD=12.84;ReadPosRankSum=2.551;VQSLOD=4.1674;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:27:34.18:0,34,258	1/1:7,2:8:20.80:148,21,0	0/0:52,0:10:21.34:0,21,142	0/0:71,0:11:6.02:0,6,65	0/0:16,0:14:35.51:0,36,270	0/0:15,0:13:17.81:0,18,156	0/0:19,0:16:37.40:0,37,309	1/1:22,4:20:56.39:421,56,0	0/0:5,0:4:6.67:0,7,34	0/0:26,0:22:65.02:0,65,434	0/0:16,0:14:41.26:0,41,263	0/0:13,0:8:14.96:0,15,127	0/0:9,0:7:14.40:0,14,99	0/0:12,0:10:24.52:0,25,186	0/0:10,0:9:24.82:0,25,155	0/0:11,0:9:17.94:0,18,153	1/1:6,7:10:26.70:188,27,0	0/0:23,0:19:34.04:0,34,364	0/0:14,0:9:23.90:0,24,190	0/0:11,0:11:28.25:0,28,190	0/0:5,0:3:8.94:0,9,68	0/0:9,0:6:14.61:0,15,117	0/0:13,0:11:29.45:0,29,233	0/0:20,0:16:23.12:0,23,188	0/0:11,0:10:23.70:0,24,161	0/0:21,0:20:55.63:0,56,374	0/0:7,0:6:17.79:0,18,119	0/0:30,0:16:31.14:0,31,204
chr10	57356096	.	T	TTC	206.06	PASS	AB=0.895;AC=5;AF=0.089;AN=56;BaseQRankSum=4.463;DP=503;FS=2.243;HRun=0;HaplotypeScore=64.9391;InbreedingCoeff=0.3278;MQ=45.41;MQ0=89;MQRankSum=-2.548;QD=1.79;ReadPosRankSum=2.821;VQSLOD=1.1906;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:25:38.19:0,38,281	0/1:6,2:7:6.85:45,0,7	0/0:46,0:7:19.27:0,19,106	0/1:70,0:9:15.01:30,0,15	0/0:17,0:15:35.80:0,36,287	0/0:14,0:12:14.96:0,15,138	0/0:19,0:16:37.90:0,38,312	0/1:20,3:17:38.33:58,0,38	0/0:5,0:4:6.45:0,6,31	0/0:26,0:22:35.60:0,36,335	0/0:17,0:15:43.40:0,43,276	0/0:12,0:7:11.97:0,12,104	0/0:9,0:7:14.25:0,14,93	0/0:13,0:11:28.83:0,29,213	0/0:9,0:8:18.88:0,19,107	0/0:9,0:7:11.63:0,12,114	1/1:7,7:11:14.51:194,15,0	0/0:22,0:18:47.61:0,48,367	0/0:13,0:9:20.94:0,21,172	0/0:13,0:12:22.98:0,23,189	0/0:4,0:2:5.91:0,6,40	0/0:10,0:7:13.55:0,14,122	0/0:12,0:10:25.80:0,26,194	0/0:19,0:15:20.81:0,21,171	0/0:10,0:9:20.17:0,20,121	0/0:19,0:18:50.01:0,50,324	0/0:7,0:6:17.50:0,17,112	0/0:36,0:20:41.03:0,41,246
chr10	57356205	.	TTGTG	T	881.03	PASS	AB=0.803;AC=22;AF=0.524;AN=42;BaseQRankSum=6.616;DP=355;FS=10.370;HRun=0;HaplotypeScore=73.1186;InbreedingCoeff=0.6579;MQ=54.43;MQ0=10;MQRankSum=-4.402;QD=5.34;ReadPosRankSum=1.665;VQSLOD=0.8504;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:26:26.69:0,27,474	./.	./.	./.	0/0:10,0:14:9.03:0,9,171	0/1:17,0:23:4.10:4,0,326	0/0:9,0:8:6.02:0,6,121	0/1:10,0:12:0:0,0,0	1/1:3,3:6:6.02:94,6,0	1/1:5,5:9:14.25:160,14,0	./.	0/0:12,0:14:26.51:0,27,410	0/0:6,0:11:14.39:0,14,185	0/0:13,0:12:9.03:0,9,177	./.	1/1:19,0:19:3.48:34,3,0	1/1:10,0:11:3.01:36,3,0	1/1:15,0:15:9.02:100,9,0	1/1:6,2:7:3.01:46,3,0	./.	1/1:21,0:18:3.01:37,3,0	0/0:5,0:5:12.04:0,12,284	0/0:8,0:8:12.04:0,12,283	0/0:17,0:21:14.52:0,15,238	1/1:5,3:8:6.02:94,6,0	1/1:11,5:16:14.72:197,15,0	1/1:10,4:14:15.05:235,15,0	./.
chr10	57356242	.	TGTGTGC	T	511.47	PASS	AB=1.000;AC=11;AF=0.204;AN=54;BaseQRankSum=-0.875;DP=356;FS=12.611;HRun=0;HaplotypeScore=96.1573;InbreedingCoeff=0.1149;MQ=47.69;MQ0=9;MQRankSum=0.008;QD=3.71;ReadPosRankSum=-2.151;VQSLOD=0.4547;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:33:99:238,0,455	./.	0/1:16,0:7:5.36:5,0,64	0/0:19,0:4:4.37:0,4,30	0/1:10,0:10:14.88:15,0,194	0/1:18,0:18:4.23:4,0,675	0/0:16,0:16:38.86:0,39,397	0/0:8,0:7:3.72:0,4,19	0/0:5,0:5:0.88:0,1,2	0/1:14,0:14:44.67:45,0,160	0/0:7,0:7:8.98:0,9,90	0/0:12,0:12:27.08:0,27,678	0/0:14,0:14:32.75:0,33,467	0/0:16,0:15:32.67:0,33,406	0/0:5,0:5:11.92:0,12,105	1/1:0,8:8:6.02:106,6,0	0/0:8,0:7:8.43:0,8,41	1/1:1,16:17:8.55:219,9,0	0/1:13,0:10:11.30:11,0,91	0/0:9,0:9:8.89:0,9,59	0/0:25,0:22:10.24:0,10,249	0/1:9,0:9:3.84:4,0,445	0/0:10,0:10:23.97:0,24,524	0/0:22,0:21:13.09:0,13,591	0/0:7,0:7:4.75:0,5,25	0/0:19,0:18:17.75:0,18,178	0/0:6,0:6:6.91:0,7,47	0/0:4,0:4:11.89:0,12,84
chr10	57356390	.	A	AGTCATGAG	2425.99	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-2.010;DP=484;FS=3.777;HRun=0;HaplotypeScore=120.7517;InbreedingCoeff=0.9127;MQ=77.22;MQ0=0;MQRankSum=-3.789;QD=38.51;ReadPosRankSum=-4.563;VQSLOD=2.7121;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:81.24:0,81,1924	1/1:2,0:3:6.02:227,6,0	0/0:20,0:20:24.08:0,24,501	0/0:20,0:19:26.12:0,26,601	0/0:11,0:11:27.09:0,27,666	0/0:13,0:13:18.06:0,18,455	0/0:23,0:23:48.15:0,48,1165	1/1:29,5:38:57.11:1587,57,0	0/0:17,0:17:42.13:0,42,1021	0/0:17,0:17:39.13:0,39,996	0/0:8,0:8:18.05:0,18,381	0/0:13,0:13:36.11:0,36,847	0/0:20,0:20:36.10:0,36,865	0/0:17,0:17:36.12:0,36,887	0/0:16,0:16:39.13:0,39,975	0/0:22,0:22:33.11:0,33,818	1/1:13,7:22:18.06:746,18,0	0/0:7,0:7:15.05:0,15,384	0/0:14,0:14:21.07:0,21,526	0/0:5,0:5:9.03:0,9,203	0/0:39,0:39:69.24:0,69,1742	0/0:11,0:11:24.08:0,24,576	0/0:8,0:8:18.06:0,18,457	0/0:28,0:28:54.19:0,54,1353	0/0:9,0:9:15.01:0,15,327	0/0:9,0:9:21.07:0,21,537	0/0:11,0:11:21.07:0,21,528	0/0:20,0:20:57.20:0,57,1440
chr10	57356943	.	CCCT	C	1924.37	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=3.676;DP=491;FS=2.669;HRun=0;HaplotypeScore=100.0086;InbreedingCoeff=0.9103;MQ=70.63;MQ0=1;MQRankSum=-5.102;QD=15.77;ReadPosRankSum=-4.953;VQSLOD=2.4802;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,128,971	0/0:5,0:5:15:0,15,225	0/0:27,0:21:43.03:0,43,641	0/0:11,0:10:19.62:0,20,254	0/0:27,0:27:74.69:0,75,612	0/0:20,0:20:57.19:0,57,1147	0/0:28,0:28:84.24:0,84,1647	0/0:25,0:25:66.10:0,66,851	1/1:13,0:13:22.72:148,23,0	1/1:10,1:11:26.83:222,27,0	1/1:11,0:11:25.94:194,26,0	0/0:18,0:18:54.11:0,54,979	0/0:13,0:13:30.09:0,30,626	0/0:26,0:26:69.20:0,69,1348	1/1:16,1:17:10.08:192,10,0	0/0:23,0:23:57.15:0,57,750	0/0:27,0:27:75.12:0,75,985	0/0:10,0:10:24.05:0,24,303	1/1:11,2:12:26.87:297,27,0	1/1:9,0:9:15.03:87,15,0	1/1:9,0:9:23.71:214,24,0	0/0:13,0:13:39.10:0,39,743	0/0:13,0:13:39.12:0,39,760	0/0:33,0:33:99:0,99,1898	1/1:5,4:9:21:249,21,0	1/1:8,0:8:18.49:136,18,0	1/1:14,3:17:42.10:385,42,0	0/1:5,0:5:17.87:18,0,19
chr10	57356944	.	CCT	C	2906.47	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=1.636;DP=488;FS=3.751;HRun=0;HaplotypeScore=87.3767;InbreedingCoeff=0.9268;MQ=71.68;MQ0=1;MQRankSum=-5.990;QD=24.63;ReadPosRankSum=-5.273;VQSLOD=2.9161;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,110,509	0/0:5,0:5:14.83:0,15,168	0/0:27,0:21:36.24:0,36,497	0/0:14,0:12:20.31:0,20,235	0/0:27,0:27:67.78:0,68,347	0/0:20,0:20:57.17:0,57,911	0/0:29,0:29:87.24:0,87,1364	0/0:25,0:25:66:0,66,628	1/1:5,7:12:29.46:348,29,0	1/1:5,6:11:30.06:377,30,0	1/1:9,2:11:29.98:275,30,0	0/0:18,0:18:52.93:0,53,784	0/0:12,0:12:29.85:0,30,502	0/0:25,0:25:69.20:0,69,1083	1/1:14,3:17:41.68:422,42,0	0/0:23,0:23:57.50:0,57,546	0/0:27,0:27:75.03:0,75,730	0/0:10,0:10:24:0,24,213	1/1:10,2:11:27.03:288,27,0	1/1:2,7:9:17.91:180,18,0	1/1:8,1:9:23.98:226,24,0	0/0:13,0:13:36.68:0,37,571	0/0:13,0:13:39.11:0,39,609	0/0:34,0:34:99:0,102,1566	1/1:7,2:9:21.01:203,21,0	1/1:4,4:8:21.04:258,21,0	1/1:12,6:18:44.96:532,45,0	0/1:2,0:2:8.95:18,0,9
chr10	57356945	.	CT	C	2382.31	PASS	AB=1.000;AC=24;AF=0.429;AN=56;BaseQRankSum=6.347;DP=487;FS=6.358;HRun=1;HaplotypeScore=81.6210;InbreedingCoeff=0.8164;MQ=72.58;MQ0=1;MQRankSum=-3.137;QD=12.47;ReadPosRankSum=-2.386;VQSLOD=1.2470;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:45,2:47:13.17:206,13,0	0/0:5,0:5:9.57:0,10,102	0/0:27,1:22:19.91:0,20,352	0/0:14,0:12:0.79:0,1,136	0/1:25,0:25:44.31:91,0,44	0/0:21,0:21:57.13:0,57,716	0/0:29,0:29:87.23:0,87,1087	0/0:26,0:26:41.80:0,42,442	1/1:13,0:13:34.67:258,35,0	1/1:10,1:11:29.84:229,30,0	1/1:11,0:11:29.96:252,30,0	0/0:19,0:19:34.13:0,34,579	0/0:11,0:11:29.83:0,30,388	0/0:23,0:23:69.18:0,69,847	1/1:13,3:16:42.35:331,42,0	0/0:24,0:24:55.33:0,55,359	0/0:26,0:26:73.44:0,73,489	0/0:10,0:10:23.07:0,23,127	1/1:8,4:11:26.79:212,27,0	1/1:7,2:9:17.87:140,18,0	1/1:7,2:9:23.94:198,24,0	0/0:13,0:13:32.08:0,32,435	0/0:13,0:13:39.10:0,39,487	0/0:34,0:34:99:0,102,1239	1/1:9,0:9:20.91:164,21,0	1/1:9,0:9:20.89:167,21,0	1/1:17,1:18:44.65:336,45,0	0/1:2,0:2:8.94:18,0,9
chr10	57356946	.	TC	T	1774.41	PASS	AB=1.000;AC=22;AF=0.393;AN=56;BaseQRankSum=6.979;DP=493;FS=3.090;HRun=8;HaplotypeScore=84.9508;InbreedingCoeff=0.7004;MQ=71.34;MQ0=1;MQRankSum=-2.586;QD=9.34;ReadPosRankSum=0.114;VQSLOD=1.9710;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,40:47:99:1153,120,0	0/0:3,0:5:14.67:0,15,99	0/0:27,1:21:9.55:0,10,272	0/0:14,0:12:6.39:0,6,157	1/1:5,20:25:63.09:608,63,0	0/0:22,0:22:60.15:0,60,689	0/0:29,0:29:81.19:0,81,949	0/0:22,0:30:35.80:0,36,202	1/1:13,0:13:6.80:20,7,0	1/1:11,0:11:12.81:34,13,0	1/1:10,0:10:1.40:4,1,0	0/0:19,0:19:36.14:0,36,466	0/0:11,0:11:29.83:0,30,360	0/0:23,0:23:63.16:0,63,728	0/1:18,0:18:14.91:15,0,17	0/0:7,0:25:43.38:0,43,251	0/0:18,0:24:61.04:0,61,380	0/0:1,0:10:20.13:0,20,102	1/1:12,0:11:9.69:27,10,0	1/1:9,0:9:6.02:25,6,0	1/1:9,0:9:3.04:9,3,0	0/0:12,1:13:10.14:0,10,397	0/0:13,0:13:33.10:0,33,398	0/0:34,0:34:90.24:0,90,1055	1/1:9,0:9:6.99:20,7,0	0/1:10,0:10:7.48:7,0,14	1/1:17,0:17:14.23:45,14,0	0/0:3,0:3:2.40:0,2,14
chr10	57356956	.	CT	C	2158.09	PASS	AB=0.632;AC=27;AF=0.482;AN=56;BaseQRankSum=7.984;DP=481;FS=5.527;HRun=9;HaplotypeScore=78.8000;InbreedingCoeff=0.8250;MQ=72.97;MQ0=1;MQRankSum=-4.711;QD=12.33;ReadPosRankSum=-5.357;VQSLOD=2.0946;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:50,1:51:99:0,103,1365	1/1:4,2:6:14.59:99,15,0	0/0:28,0:21:23.58:0,24,227	0/0:14,0:12:2.21:0,2,162	0/0:26,0:26:65.26:0,65,729	0/0:21,0:21:60.10:0,60,659	0/0:27,0:27:75.22:0,75,865	1/1:11,15:26:35.91:302,36,0	0/1:5,7:12:10.75:162,0,11	1/1:3,8:12:26.04:223,26,0	1/1:1,6:7:5.98:55,6,0	0/0:18,0:18:42.12:0,42,485	0/0:12,0:12:26.82:0,27,311	0/0:20,0:20:60.14:0,60,671	1/1:9,6:15:8.27:127,8,0	0/0:19,0:19:39.11:0,39,442	1/1:15,9:24:39.57:499,40,0	0/0:11,0:11:18.04:0,18,197	1/1:5,7:11:20.95:186,21,0	1/1:7,1:8:7.63:76,8,0	1/1:2,8:10:2.99:27,3,0	0/0:14,0:14:39.11:0,39,441	0/0:15,1:16:17.65:0,18,439	0/0:29,0:29:81.23:0,81,926	1/1:1,9:10:14.99:134,15,0	1/1:2,8:10:17.76:157,18,0	1/1:7,12:19:29.98:271,30,0	1/1:0,4:4:6:55,6,0
chr10	57357283	.	TAG	T	2139.99	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.143;DP=676;FS=1.110;HRun=0;HaplotypeScore=82.3852;InbreedingCoeff=0.9993;MQ=71.66;MQ0=0;MQRankSum=1.252;QD=37.54;ReadPosRankSum=-0.912;VQSLOD=5.2782;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,108,2011	1/1:1,9:10:27.09:397,27,0	0/0:34,0:31:93.28:0,93,1673	0/0:22,0:22:63.20:0,63,1102	0/0:29,0:29:84.27:0,84,1539	0/0:20,0:20:60.20:0,60,1095	0/0:21,0:21:63.20:0,63,1147	1/1:0,29:29:87.29:1267,87,0	0/0:25,0:25:69.24:0,69,1292	0/0:29,0:29:84.29:0,84,1560	0/0:12,0:12:33.11:0,33,618	0/0:28,0:28:81.28:0,81,1494	0/0:21,0:21:63.22:0,63,1164	0/0:19,0:19:57.20:0,57,1049	0/0:31,0:31:93.32:0,93,1734	0/0:25,0:25:75.26:0,75,1375	1/1:1,17:17:42.14:618,42,0	0/0:19,0:19:57.15:0,57,1026	0/0:24,0:24:72.24:0,72,1308	0/0:21,0:21:60.21:0,60,1119	0/0:39,0:39:99:0,117,2189	0/0:32,0:32:90.29:0,90,1636	0/0:28,0:28:81.28:0,81,1509	0/0:30,0:30:87.30:0,87,1629	0/0:12,0:12:33.11:0,33,618	0/0:29,0:29:87.25:0,87,1554	0/0:23,0:23:66.21:0,66,1201	0/0:10,0:10:30.10:0,30,562
chr10	57359589	.	GGGGGGAAAAAAAAA	G	6265.74	PASS	AB=1.000;AC=20;AF=0.357;AN=56;BaseQRankSum=12.679;DP=424;FS=0.000;HRun=0;HaplotypeScore=159.0181;InbreedingCoeff=0.3495;MQ=48.18;MQ0=30;MQRankSum=-8.388;QD=30.71;ReadPosRankSum=7.350;VQSLOD=3.4079;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:54.19:0,54,2695	1/1:2,0:4:9.03:238,9,0	0/0:16,0:5:9.03:0,9,299	0/0:19,0:11:20.15:0,20,526	0/0:21,0:20:60.19:0,60,2077	0/0:11,0:11:24.08:0,24,1073	0/0:25,0:23:59.94:0,60,2913	1/1:0,13:13:39.13:942,39,0	0/1:17,0:17:15.31:740,0,15	0/1:18,0:16:87.97:419,0,88	1/1:8,0:7:11.53:260,12,0	0/0:13,0:11:33.11:0,33,1580	0/0:10,0:9:24.08:0,24,1081	0/0:5,0:5:15.05:0,15,935	0/1:16,0:15:32.38:415,0,32	0/0:11,0:11:30.10:0,30,836	1/1:1,15:15:15.05:629,15,0	0/0:15,0:13:9.03:0,9,361	0/1:18,0:17:46.47:436,0,46	0/1:11,0:11:7.44:175,0,7	0/1:19,0:19:17.39:230,0,17	0/0:26,0:25:75.24:0,75,3284	0/0:12,0:12:33.11:0,33,1448	0/0:15,0:14:33.99:0,34,1708	0/1:10,0:10:40.52:167,0,41	0/1:20,0:18:99:522,0,104	1/1:21,0:21:30.48:838,30,0	1/1:13,0:7:9.03:255,9,0
chr10	57359591	.	GGGGAAAAAAAAAAA	G	8572.91	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=12.233;DP=423;FS=2.123;HRun=0;HaplotypeScore=145.6879;InbreedingCoeff=0.9151;MQ=49.70;MQ0=35;MQRankSum=-7.385;QD=45.36;ReadPosRankSum=7.514;VQSLOD=3.8395;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:54.17:0,54,2745	1/1:4,0:4:9.01:147,9,0	0/0:19,0:3:9.03:0,9,260	0/0:22,0:12:23.16:0,23,484	0/0:21,0:21:63.18:0,63,2007	0/0:12,0:12:27.09:0,27,1098	0/0:24,0:22:56.93:0,57,2644	1/1:13,0:13:37.99:418,38,0	1/1:2,13:16:21.24:1086,21,0	1/1:2,10:11:27.09:800,27,0	1/1:1,5:6:12.04:406,12,0	0/0:13,0:11:33.11:0,33,1591	0/0:11,0:10:27.09:0,27,1097	0/0:8,0:8:24.08:0,24,1362	1/1:2,11:12:15.52:626,16,0	0/0:12,0:12:33.02:0,33,744	1/1:17,0:15:15.05:435,15,0	0/0:16,0:14:11.25:0,11,356	1/1:3,15:18:12.25:1054,12,0	1/1:0,8:8:11.88:335,12,0	1/1:0,15:16:3.18:346,3,0	0/0:26,0:24:72.23:0,72,2907	0/0:14,0:14:36.59:0,37,1428	0/0:15,0:14:30.99:0,31,1621	1/1:0,9:9:6.02:250,6,0	1/1:2,17:17:39.13:1072,39,0	1/1:0,19:20:30.31:1223,30,0	1/1:7,7:8:9.03:375,9,0
chr10	57359593	.	GGAAA	G	1940.68	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=11.851;DP=431;FS=0.470;HRun=0;HaplotypeScore=110.8556;InbreedingCoeff=0.8602;MQ=49.63;MQ0=36;MQRankSum=-8.459;QD=8.82;ReadPosRankSum=7.584;VQSLOD=1.8002;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:42.49:0,42,589	1/1:4,0:4:7.07:38,7,0	0/0:22,0:5:11.85:0,12,124	0/0:21,0:11:0.27:0,0,98	0/0:21,0:20:42.38:0,42,383	0/0:13,0:13:29.96:0,30,344	0/0:24,0:22:28.16:0,28,671	1/1:13,0:13:26.84:113,27,0	1/1:17,0:16:26.99:235,27,0	1/1:13,0:11:22.79:160,23,0	1/1:7,0:6:11.68:90,12,0	0/0:13,0:11:29.37:0,29,308	0/0:12,0:11:3.72:0,4,319	0/0:8,0:8:11.70:0,12,218	1/1:13,0:12:15:130,15,0	1/1:11,1:13:29.26:252,29,0	1/1:17,0:15:15:129,15,0	1/1:3,13:15:8.05:85,8,0	1/1:19,0:18:35.42:203,35,0	1/1:8,0:8:8.68:63,9,0	1/1:16,0:16:8.28:71,8,0	0/0:25,0:23:65.85:0,66,669	0/0:15,0:15:20.70:0,21,353	0/0:17,0:16:33.09:0,33,474	1/1:9,0:9:6:52,6,0	1/1:19,0:17:33.21:211,33,0	1/1:21,0:21:27.34:245,27,0	1/1:14,0:8:9:78,9,0
chr10	57360029	.	AT	A	960.56	PASS	AB=1.000;AC=12;AF=0.231;AN=52;BaseQRankSum=7.213;DP=234;FS=4.477;HRun=9;HaplotypeScore=36.6616;InbreedingCoeff=0.5775;MQ=49.36;MQ0=19;MQRankSum=-0.824;QD=12.98;ReadPosRankSum=0.188;VQSLOD=2.4542;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,1:25:49.37:0,49,692	1/1:1,5:5:15.01:137,15,0	0/0:10,0:1:3:0,3,29	0/0:9,0:6:11.97:0,12,113	0/0:14,0:14:27.08:0,27,309	0/0:10,0:8:21.05:0,21,234	0/0:10,0:8:24.03:0,24,262	1/1:11,19:28:56.96:512,57,0	0/1:4,0:4:0.28:0,0,0	0/1:3,0:3:5.32:5,0,11	./.	0/0:6,0:6:18.04:0,18,196	0/0:6,0:6:14.98:0,15,145	0/0:7,0:6:9.03:0,9,101	0/0:1,0:1:2.98:0,3,22	0/0:10,0:9:21.06:0,21,242	1/1:4,20:22:47.50:438,47,0	0/0:15,0:14:36.07:0,36,401	0/0:3,0:1:2.97:0,3,20	1/1:1,0:1:0.47:1,0,0	./.	0/0:3,0:3:6.02:0,6,69	0/0:14,0:13:18.05:0,18,202	0/0:8,0:8:24.07:0,24,277	0/1:4,0:2:0:0,0,0	0/0:3,0:3:5.97:0,6,55	0/1:2,0:2:0.05:0,0,0	0/0:3,0:3:2.98:0,3,21
chr10	57360983	.	AG	A	1346.59	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=6.963;DP=546;FS=2.782;HRun=5;HaplotypeScore=52.5617;InbreedingCoeff=0.9919;MQ=84.24;MQ0=0;MQRankSum=-1.368;QD=27.48;ReadPosRankSum=-1.369;VQSLOD=2.7949;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:87.29:0,87,1189	1/1:0,5:5:15.04:170,15,0	0/0:21,0:21:51.11:0,51,637	0/0:17,0:17:30.02:0,30,355	0/0:27,0:27:75.25:0,75,1025	0/0:19,0:19:57.19:0,57,779	0/0:17,0:17:33.11:0,33,452	1/1:3,24:27:69.18:773,69,0	0/0:20,0:20:51.17:0,51,697	0/0:23,0:23:66.22:0,66,902	0/0:24,0:24:60.20:0,60,819	0/0:21,0:21:63.21:0,63,856	0/0:21,0:21:63.18:0,63,828	0/0:18,0:18:48.15:0,48,642	0/0:22,0:22:66.20:0,66,870	0/0:11,0:11:27.09:0,27,369	1/1:1,16:17:48.14:544,48,0	0/0:7,0:7:21.07:0,21,283	0/0:28,0:28:66.18:0,66,854	0/0:25,0:25:75.24:0,75,1009	0/0:19,0:19:54.18:0,54,738	0/0:11,0:11:30.10:0,30,410	0/0:16,0:16:45.15:0,45,615	0/0:14,0:14:42.14:0,42,575	0/0:18,0:18:51.16:0,51,681	0/0:24,0:24:69.23:0,69,943	0/0:32,0:31:90.30:0,90,1221	0/0:12,0:12:33.11:0,33,451
chr10	57361558	.	GTGAA	G	9313.75	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=6.505;DP=693;FS=2.084;HRun=0;HaplotypeScore=124.4500;InbreedingCoeff=0.9763;MQ=67.15;MQ0=2;MQRankSum=2.255;QD=25.45;ReadPosRankSum=0.351;VQSLOD=4.3826;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:34:57.16:0,57,952	1/1:4,5:9:18.06:289,18,0	0/0:25,0:21:15.05:0,15,275	0/0:12,0:11:6.01:0,6,75	0/0:6,0:27:66.05:0,66,1020	0/0:26,0:26:60.19:0,60,1367	0/0:15,0:15:36.11:0,36,791	1/1:22,10:32:30.06:401,30,0	1/1:13,13:27:51.15:775,51,0	1/1:12,26:38:78.24:1199,78,0	1/1:11,11:22:48.09:729,48,0	0/0:16,0:16:33.11:0,33,765	0/0:38,1:39:24.05:0,24,1448	0/0:21,0:21:45.12:0,45,1005	1/1:7,25:32:60.20:963,60,0	0/0:7,0:29:33.03:0,33,575	1/1:11,28:39:60.20:943,60,0	0/0:12,0:17:12.01:0,12,179	1/1:7,8:15:24.08:385,24,0	1/1:11,4:15:18.06:289,18,0	1/1:20,20:39:39.13:613,39,0	0/0:26,0:26:72.25:0,72,1677	0/0:18,0:18:54.19:0,54,1279	0/0:22,0:22:42.13:0,42,962	1/1:8,12:20:42.13:651,42,0	1/1:12,20:32:75.25:1181,75,0	1/1:23,7:30:33.09:475,33,0	1/1:8,7:15:30.06:420,30,0
chr10	57361626	.	TCAAA	T	9791.45	PASS	AB=0.944;AC=29;AF=0.518;AN=56;BaseQRankSum=10.075;DP=707;FS=3.000;HRun=0;HaplotypeScore=141.3031;InbreedingCoeff=0.9194;MQ=62.06;MQ0=3;MQRankSum=2.079;QD=25.97;ReadPosRankSum=3.851;VQSLOD=4.9002;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:35:71.31:0,71,1630	1/1:4,13:17:23.35:367,23,0	0/0:30,0:22:25.31:0,25,504	0/0:13,0:12:17.99:0,18,334	0/0:29,0:29:69.19:0,69,1509	0/0:23,0:23:48.15:0,48,1120	0/0:24,0:24:45.05:0,45,954	1/1:24,1:25:27.05:329,27,0	1/1:9,18:27:48.16:784,48,0	1/1:22,20:42:84.24:1276,84,0	1/1:6,18:24:51.09:800,51,0	0/0:22,0:22:45.13:0,45,998	0/0:32,1:33:20.21:0,20,1380	0/0:22,0:22:45.14:0,45,1009	1/1:16,16:32:54.18:865,54,0	0/1:16,1:17:12.86:13,0,761	1/1:13,13:26:42.12:658,42,0	0/0:20,0:20:8.21:0,8,835	1/1:13,7:19:22.89:348,23,0	1/1:7,18:24:54.12:839,54,0	1/1:13,15:28:42.14:686,42,0	0/0:31,0:31:60.16:0,60,1301	0/0:26,0:26:48.14:0,48,1098	0/0:20,0:20:51.15:0,51,1191	1/1:4,21:25:45.15:735,45,0	1/1:14,22:36:63.15:976,63,0	1/1:4,20:24:48.12:755,48,0	1/1:1,8:9:24.03:362,24,0
chr10	57361882	.	CCA	C	2188.87	PASS	AB=0.860;AC=12;AF=0.214;AN=56;BaseQRankSum=8.287;DP=1108;FS=19.169;HRun=0;HaplotypeScore=143.3522;InbreedingCoeff=0.5460;MQ=56.06;MQ0=46;MQRankSum=0.594;QD=8.83;ReadPosRankSum=1.772;VQSLOD=1.8033;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,2:51:19.83:0,20,1527	1/1:4,2:6:12.03:137,12,0	0/0:87,0:15:21.99:0,22,270	0/0:84,0:19:6.75:0,7,99	0/0:16,1:16:7.95:0,8,616	0/0:32,0:32:41.07:0,41,1129	0/0:46,0:45:83.47:0,83,1812	1/1:38,10:37:2.70:506,3,0	0/0:25,0:25:51:0,51,957	0/0:43,0:41:85.90:0,86,1320	0/0:15,0:15:27.09:0,27,432	0/0:38,0:35:74.20:0,74,1261	0/0:29,0:28:69.21:0,69,1076	0/0:19,0:18:28.81:0,29,579	0/0:37,2:37:24.88:0,25,1376	1/1:9,23:31:49.04:597,49,0	0/1:17,28:44:4.76:435,0,5	1/1:6,34:40:53.90:633,54,0	0/1:32,2:28:29.33:29,0,502	0/0:22,0:20:14.01:0,14,732	0/0:151,0:145:99:0,315,5397	0/1:15,1:15:4.12:4,0,400	0/0:22,1:22:13.97:0,14,740	0/0:66,0:65:99:0,114,2145	0/1:23,1:23:8.16:8,0,874	0/0:41,0:42:43.94:0,44,1176	0/0:8,0:7:9.03:0,9,147	0/0:20,0:20:44.15:0,44,662
chr10	57361997	.	ACACAC	A	1958.81	PASS	AB=0.737;AC=5;AF=0.089;AN=56;BaseQRankSum=6.450;DP=850;FS=1.943;HRun=0;HaplotypeScore=162.1787;InbreedingCoeff=0.6788;MQ=49.41;MQ0=54;MQRankSum=-10.040;QD=22.01;ReadPosRankSum=-0.008;VQSLOD=3.3573;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:42:99:0,117,3142	1/1:4,5:9:5.82:184,6,0	0/0:50,0:2:6.02:0,6,101	0/0:80,0:7:17.51:0,18,324	0/0:20,0:20:54.19:0,54,1504	0/0:25,0:24:51.17:0,51,1401	0/0:39,0:38:99:0,106,2884	0/1:36,20:44:99:1351,0,361	0/0:16,0:15:28.85:0,29,795	0/0:29,0:26:69.06:0,69,1549	0/0:10,0:9:23.81:0,24,625	0/0:21,0:19:33.58:0,34,977	0/0:18,0:17:48.16:0,48,1389	0/0:24,0:21:63.21:0,63,1586	0/0:24,0:23:57.20:0,57,1361	0/0:20,0:19:51.15:0,51,1345	1/1:19,5:23:16.73:543,17,0	0/0:29,0:29:46.56:0,47,1945	0/0:28,0:21:48.16:0,48,1224	0/0:17,0:15:33.39:0,33,617	0/0:126,1:117:99:0,235,5606	0/0:12,0:12:33.11:0,33,817	0/0:16,0:13:36.11:0,36,984	0/0:49,0:48:99:0,111,3001	0/0:13,0:12:21.06:0,21,443	0/0:20,0:18:50.84:0,51,1283	0/0:10,0:9:24.08:0,24,515	0/0:21,0:21:36.12:0,36,843
chr10	57362011	.	GAC	G	3915.05	PASS	AB=0.900;AC=30;AF=0.536;AN=56;BaseQRankSum=8.592;DP=811;FS=12.279;HRun=0;HaplotypeScore=116.7437;InbreedingCoeff=0.2359;MQ=52.90;MQ0=44;MQRankSum=0.338;QD=6.77;ReadPosRankSum=1.823;VQSLOD=2.8309;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:43,2:44:69.17:69,0,820	0/1:9,2:11:5.09:5,0,10	0/0:43,0:6:11.95:0,12,109	0/0:76,0:12:11.88:0,12,76	0/0:23,0:23:25.32:0,25,632	0/1:19,2:22:33.26:33,0,566	0/1:31,3:33:42.23:42,0,753	0/1:51,1:43:84:207,0,84	1/1:5,9:14:15.53:185,16,0	1/1:10,17:26:41.21:547,41,0	1/1:5,9:14:17.81:190,18,0	0/0:23,0:21:45.11:0,45,647	0/0:17,0:16:39.11:0,39,568	0/1:22,1:21:28.34:28,0,411	1/1:5,14:21:23.73:239,24,0	0/0:19,1:19:0.39:0,0,479	0/1:21,1:21:17.86:76,0,18	0/1:24,2:26:49.79:50,0,639	1/1:14,4:14:32.75:334,33,0	1/1:6,12:18:11.56:140,12,0	1/1:53,58:105:64.55:907,65,0	0/0:15,0:15:36.12:0,36,556	0/0:15,0:13:27.09:0,27,402	0/1:37,3:40:99:111,0,949	1/1:1,14:15:14.88:155,15,0	0/1:11,11:20:19.81:301,0,20	1/1:4,6:9:6.02:70,6,0	1/1:8,12:20:20.89:225,21,0
chr10	57362015	.	C	CAGAG	1312.54	PASS	AB=0.771;AC=3;AF=0.054;AN=56;BaseQRankSum=2.970;DP=838;FS=2.184;HRun=0;HaplotypeScore=163.7724;InbreedingCoeff=-0.0053;MQ=54.05;MQ0=42;MQRankSum=-4.290;QD=14.58;ReadPosRankSum=-3.213;VQSLOD=3.1581;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:42:99:0,105,1789	0/1:7,5:14:10.39:180,0,10	0/0:46,0:8:18.06:0,18,311	0/0:76,0:16:21.32:0,21,433	0/0:22,0:22:66.23:0,66,1226	0/0:24,0:23:63.18:0,63,1062	0/0:35,0:34:98.84:0,99,1651	0/1:33,16:44:99:870,0,350	0/0:17,0:15:26.35:0,26,285	0/0:34,0:30:68.95:0,69,869	0/0:16,0:15:23.91:0,24,307	0/0:23,0:21:50.90:0,51,966	0/0:19,0:18:54.15:0,54,971	0/0:23,0:21:57.19:0,57,998	0/0:21,0:21:39.12:0,39,519	0/0:20,0:19:48.15:0,48,863	0/1:21,2:22:99:362,0,171	0/0:27,0:27:68.34:0,68,1253	0/0:17,0:14:36.05:0,36,403	0/0:20,0:20:29.70:0,30,350	0/0:122,0:113:99:0,173,2272	0/0:15,0:15:42.14:0,42,814	0/0:14,0:12:36.11:0,36,648	0/0:41,0:41:99:0,99,1728	0/0:16,0:16:15.04:0,15,174	0/0:25,0:23:33.77:0,34,499	0/0:11,0:10:11.83:0,12,132	0/0:21,0:20:33.10:0,33,437
chr10	57362318	.	AT	A	2531.43	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.331;DP=535;FS=4.436;HRun=3;HaplotypeScore=50.9949;InbreedingCoeff=0.9966;MQ=73.18;MQ0=0;MQRankSum=-1.454;QD=31.64;ReadPosRankSum=-2.911;VQSLOD=2.2688;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:69.23:0,69,994	1/1:1,6:7:18.06:223,18,0	0/0:13,0:13:36.12:0,36,489	0/0:19,0:19:41.39:0,41,583	0/0:15,0:15:42.14:0,42,600	0/0:18,0:18:51.16:0,51,716	0/0:22,0:22:63.18:0,63,870	1/1:0,38:38:99:1372,114,0	0/0:21,0:21:57.19:0,57,820	0/0:26,0:26:78.25:0,78,1105	0/0:16,0:16:45.15:0,45,648	0/0:16,0:16:48.16:0,48,691	0/0:18,0:18:51.13:0,51,711	0/0:16,0:16:48.16:0,48,690	0/0:22,0:22:63.21:0,63,907	0/0:24,0:24:72.23:0,72,1019	1/1:0,35:35:87.27:1078,87,0	0/0:22,0:22:57.19:0,57,821	0/0:15,0:15:45.15:0,45,648	0/0:23,0:23:69.23:0,69,993	0/0:14,0:14:39.13:0,39,561	0/0:14,0:14:42.14:0,42,604	0/0:18,0:18:51.17:0,51,734	0/0:10,0:10:27.09:0,27,385	0/0:15,0:15:45.15:0,45,644	0/0:23,0:23:69.22:0,69,977	0/0:16,0:16:48.16:0,48,691	0/0:16,0:16:45.12:0,45,609
chr10	57362684	.	CG	C	515.19	PASS	AB=0.983;AC=18;AF=0.321;AN=56;BaseQRankSum=4.708;DP=413;FS=1.193;HRun=1;HaplotypeScore=62.9449;InbreedingCoeff=0.3493;MQ=54.12;MQ0=6;MQRankSum=0.050;QD=4.06;ReadPosRankSum=0.139;VQSLOD=0.2241;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:36:67.15:0,67,932	0/1:6,0:6:0.61:1,0,13	1/1:2,1:2:6.01:64,6,0	0/1:5,0:4:6.88:30,0,7	0/0:16,0:16:36.70:0,37,442	0/0:18,0:18:42.37:0,42,479	0/0:22,0:22:53.58:0,54,586	0/0:32,0:31:32.82:0,33,217	1/1:7,0:7:1.24:35,1,0	1/1:10,0:10:2.93:58,3,0	0/1:16,1:17:48.90:76,0,49	0/0:20,0:20:54.10:0,54,751	0/0:14,0:14:38.32:0,38,444	0/0:11,0:11:27.83:0,28,294	1/1:9,0:10:3.37:50,3,0	0/0:13,0:13:31.37:0,31,365	0/0:31,0:31:0.85:0,1,104	0/0:17,0:17:42.01:0,42,443	0/1:15,0:14:7.42:58,0,7	0/1:20,1:21:16.35:48,0,16	0/0:8,0:8:7.06:0,7,22	0/0:15,0:15:32.37:0,32,390	0/0:9,1:10:6.47:0,6,248	0/0:13,0:13:30.03:0,30,414	1/1:5,1:6:3.02:72,3,0	1/1:10,3:12:9.35:171,9,0	0/1:13,0:13:12.26:12,0,45	0/0:9,0:8:11.08:0,11,32
chr10	57362685	.	GA	G	655.37	PASS	AB=0.969;AC=13;AF=0.232;AN=56;BaseQRankSum=5.727;DP=424;FS=3.533;HRun=12;HaplotypeScore=64.6795;InbreedingCoeff=0.5210;MQ=54.12;MQ0=6;MQRankSum=1.524;QD=5.55;ReadPosRankSum=3.353;VQSLOD=1.8993;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,3:36:40.25:0,40,693	1/1:3,4:7:10.98:76,11,0	1/1:2,1:2:5.97:43,6,0	0/1:5,0:4:2.18:13,0,2	0/0:13,2:15:12.80:0,13,300	0/0:16,2:18:9.76:0,10,257	0/0:22,1:23:16.60:0,17,311	1/1:15,13:30:12.19:219,12,0	0/0:7,0:7:14.93:0,15,129	0/0:11,0:10:13.39:0,13,162	0/0:20,0:20:28.99:0,29,331	0/0:20,0:20:57.01:0,57,536	0/0:13,0:13:27.01:0,27,259	0/1:9,2:11:25.43:25,0,131	0/0:10,0:10:23.68:0,24,178	0/0:13,0:13:27.01:0,27,257	1/1:6,24:30:41.52:423,42,0	0/0:15,2:18:5.83:0,6,228	0/0:15,0:14:23.97:0,24,226	0/0:22,0:22:37.68:0,38,432	0/0:8,0:8:18.85:0,19,159	0/0:15,1:17:7.28:0,7,241	0/1:11,0:11:2.16:2,0,160	0/0:14,0:14:29.97:0,30,278	0/1:6,0:6:1.63:2,0,79	0/1:14,0:13:11.94:12,0,158	0/0:16,0:16:43.78:0,44,347	0/0:9,0:8:23.98:0,24,231
chr10	57362987	.	C	CA	1518	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-9.814;DP=567;FS=5.552;HRun=7;HaplotypeScore=54.1406;InbreedingCoeff=0.9969;MQ=86.31;MQ0=0;MQRankSum=-0.950;QD=27.60;ReadPosRankSum=0.069;VQSLOD=4.2631;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,111,1065	1/1:0,7:7:18.06:217,18,0	0/0:21,0:21:35.95:0,36,325	0/0:18,0:18:46.59:0,47,427	0/0:18,0:18:54.07:0,54,516	0/0:25,0:25:69.11:0,69,666	0/0:21,0:21:54.03:0,54,503	1/1:5,12:17:39.12:470,39,0	0/0:16,0:16:39.06:0,39,377	0/0:26,0:26:72.11:0,72,695	0/0:16,0:16:45.07:0,45,435	0/0:22,0:22:63.06:0,63,599	0/0:17,0:17:42.06:0,42,406	0/0:15,0:15:42.07:0,42,406	0/0:30,0:30:81.12:0,81,782	0/0:19,0:19:48.02:0,48,446	1/1:1,30:30:81.25:973,81,0	0/0:16,0:16:42.07:0,42,406	0/0:16,0:16:42.07:0,42,405	0/0:27,0:27:71.98:0,72,695	0/0:27,0:27:78.08:0,78,744	0/0:18,0:18:51.06:0,51,482	0/0:14,0:14:36.06:0,36,348	0/0:28,0:28:74.91:0,75,700	0/0:16,0:16:45.07:0,45,435	0/0:15,0:15:45.07:0,45,434	0/0:18,0:17:48.06:0,48,456	0/0:13,0:13:39.06:0,39,377
chr10	57365749	.	CTG	C	3559.29	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=10.473;DP=746;FS=0.000;HRun=0;HaplotypeScore=90.8269;InbreedingCoeff=1.0000;MQ=83.41;MQ0=0;MQRankSum=-0.339;QD=41.87;ReadPosRankSum=-1.764;VQSLOD=4.7750;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,120,2261	1/1:0,18:18:51.17:781,51,0	0/0:27,0:27:81.19:0,81,1442	0/0:19,0:19:56.98:0,57,1028	0/0:20,0:20:54.19:0,54,1042	0/0:28,0:28:84.26:0,84,1583	0/0:22,0:22:66.21:0,66,1231	1/1:0,33:33:96.26:1400,96,0	0/0:30,0:30:87.28:0,87,1648	0/0:36,0:36:99:0,105,1956	0/0:15,0:15:42.14:0,42,811	0/0:27,0:27:78.27:0,78,1485	0/0:19,0:19:57.20:0,57,1089	0/0:23,0:23:63.22:0,63,1217	0/0:29,0:29:81.28:0,81,1565	0/0:25,0:25:75.26:0,75,1415	1/1:0,34:34:90.31:1378,90,0	0/0:31,0:31:93.32:0,93,1779	0/0:25,0:25:75.15:0,75,1358	0/0:22,0:22:60.21:0,60,1158	0/0:30,0:30:87.30:0,87,1681	0/0:31,0:31:81.28:0,81,1564	0/0:29,0:29:81.28:0,81,1552	0/0:27,0:27:72.23:0,72,1353	0/0:28,0:28:81.28:0,81,1538	0/0:35,0:35:99:0,105,2011	0/0:24,0:23:63.22:0,63,1191	0/0:15,0:15:45.15:0,45,857
chr10	57366474	.	GT	G	5511.58	PASS	AB=0.578;AC=26;AF=0.464;AN=56;BaseQRankSum=2.859;DP=631;FS=3.947;HRun=11;HaplotypeScore=91.6299;InbreedingCoeff=0.8121;MQ=65.05;MQ0=7;MQRankSum=1.037;QD=17.28;ReadPosRankSum=0.593;VQSLOD=5.4850;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:69.64:0,70,734	0/1:1,4:5:17:83,0,17	0/0:37,0:14:15.56:0,16,244	0/0:35,0:21:11.04:0,11,165	0/0:20,0:23:65.70:0,66,651	0/0:22,0:22:62.82:0,63,645	0/0:15,1:16:17.39:0,17,363	1/1:9,18:26:53.89:442,54,0	1/1:1,17:18:32.47:270,32,0	1/1:8,23:31:68.86:562,69,0	1/1:3,19:23:43.92:351,44,0	0/0:14,1:15:4.27:0,4,346	0/0:16,0:16:24.38:0,24,427	0/0:16,2:18:11.46:0,11,325	1/1:6,20:26:53.91:443,54,0	0/0:18,0:18:45.11:0,45,476	1/1:11,15:24:19.13:297,19,0	0/0:25,0:25:57.10:0,57,588	1/1:9,18:25:49.43:448,49,0	1/1:3,29:32:80.86:664,81,0	1/1:2,10:12:26.56:221,27,0	0/0:18,0:18:39.10:0,39,416	0/0:14,1:17:20.12:0,20,379	0/0:23,2:25:10.83:0,11,514	1/1:7,14:21:9.50:266,10,0	1/1:4,24:28:71.88:587,72,0	1/1:4,33:37:83.61:794,84,0	0/1:2,4:6:17:83,0,17
chr10	57366501	.	G	GTT	810.12	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=1.945;DP=582;FS=6.757;HRun=10;HaplotypeScore=109.8291;InbreedingCoeff=0.7773;MQ=70.78;MQ0=2;MQRankSum=-4.616;QD=11.91;ReadPosRankSum=-3.376;VQSLOD=1.1625;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:50.61:0,51,484	1/1:3,2:5:3.01:45,3,0	0/1:23,0:17:4.24:4,0,146	0/0:31,0:21:15.53:0,16,276	0/0:24,0:25:30.62:0,31,459	0/0:26,0:26:38.56:0,39,532	0/0:15,0:16:35.78:0,36,408	1/1:11,5:17:32.53:371,33,0	0/0:13,0:13:23.68:0,24,220	0/0:22,0:23:53.83:0,54,530	0/0:21,0:21:54.01:0,54,537	0/0:16,0:16:32.95:0,33,323	0/0:14,0:14:23.95:0,24,232	0/0:8,0:9:10.45:0,10,172	0/0:27,0:27:66.12:0,66,662	0/0:16,0:16:42.05:0,42,412	1/1:11,11:22:43.58:524,44,0	0/0:22,0:24:24.03:0,24,362	0/0:29,0:29:47.71:0,48,565	0/0:31,0:33:58.92:0,59,673	0/0:10,0:10:14.99:0,15,145	0/0:14,0:14:29.80:0,30,344	0/0:16,0:17:15.53:0,16,324	0/0:27,0:27:63.83:0,64,599	0/0:25,0:27:48.87:0,49,582	0/0:31,0:31:63.04:0,63,634	0/0:32,0:31:78.07:0,78,772	0/0:5,0:5:11.99:0,12,114
chr10	57366647	.	C	CT	1912.33	PASS	AB=0.559;AC=9;AF=0.161;AN=56;BaseQRankSum=-5.886;DP=554;FS=0.957;HRun=12;HaplotypeScore=61.3145;InbreedingCoeff=0.8426;MQ=68.45;MQ0=1;MQRankSum=-2.614;QD=16.07;ReadPosRankSum=-1.659;VQSLOD=4.1407;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:7,26:33:4.98:435,0,5	1/1:1,5:6:12.02:117,12,0	0/0:15,0:13:5.06:0,5,60	0/0:14,0:12:11.63:0,12,74	1/1:4,20:24:51.08:495,51,0	0/0:24,1:25:41:0,41,431	0/0:14,0:14:23.85:0,24,175	1/1:6,20:25:47.97:444,48,0	0/0:13,0:14:12.40:0,12,183	0/0:30,0:30:71.56:0,72,525	0/0:17,0:17:32.78:0,33,241	0/0:18,0:18:40.58:0,41,314	0/0:17,0:17:38.74:0,39,284	0/0:9,0:9:23.83:0,24,172	0/0:14,0:15:31.82:0,32,221	0/0:15,0:15:41.72:0,42,304	1/1:4,25:29:60.10:584,60,0	0/0:20,1:21:18.41:0,18,296	0/0:20,1:21:40.59:0,41,303	0/0:33,0:33:70.85:0,71,511	0/0:12,0:12:29.77:0,30,217	0/0:13,0:14:20.78:0,21,153	0/0:20,0:20:50.67:0,51,372	0/0:9,0:10:25.87:0,26,178	0/0:20,2:22:13.68:0,14,268	0/0:31,0:32:77.86:0,78,546	0/0:32,0:32:77.45:0,77,565	0/0:14,0:14:26.78:0,27,197
chr10	57367396	.	T	TA	869.96	PASS	AB=0.960;AC=7;AF=0.130;AN=54;BaseQRankSum=-3.920;DP=381;FS=0.000;HRun=8;HaplotypeScore=47.0020;InbreedingCoeff=0.7134;MQ=77.36;MQ0=8;MQRankSum=1.128;QD=9.06;ReadPosRankSum=2.085;VQSLOD=0.6248;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:84.03:0,84,762	0/0:3,0:3:3:0,3,27	0/0:41,0:20:18.81:0,19,179	0/1:46,1:21:3.53:4,0,131	0/0:15,0:15:45.02:0,45,411	0/0:17,0:17:51.03:0,51,467	0/0:8,0:9:23.05:0,23,198	0/0:23,0:23:41.25:0,41,327	0/0:7,0:7:14.99:0,15,133	0/0:10,0:10:21:0,21,192	0/0:4,0:4:12.01:0,12,110	0/0:7,0:7:18.01:0,18,165	0/0:7,0:7:17.38:0,17,164	0/0:4,0:4:12.01:0,12,110	0/0:12,0:12:30:0,30,270	1/1:1,10:11:24.07:277,24,0	1/1:14,0:14:8.04:33,8,0	1/1:2,21:23:60.18:692,60,0	0/0:24,0:22:60.02:0,60,549	0/0:1,0:1:3:0,3,27	0/0:11,0:11:21:0,21,192	./.	0/0:4,0:4:9:0,9,82	0/0:7,0:7:21.01:0,21,192	0/0:9,0:9:27.01:0,27,247	0/0:21,0:21:51.01:0,51,463	0/0:11,0:11:27.01:0,27,247	0/0:5,0:5:15.01:0,15,137
chr10	57367398	.	A	AATTAAATTTT	2752.96	PASS	AB=0.979;AC=7;AF=0.130;AN=54;BaseQRankSum=-0.492;DP=377;FS=15.524;HRun=0;HaplotypeScore=107.1394;InbreedingCoeff=0.7263;MQ=77.70;MQ0=8;MQRankSum=-5.331;QD=31.28;ReadPosRankSum=-3.273;VQSLOD=1.4001;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:84.29:0,84,2549	1/1:3,0:3:9.03:302,9,0	0/0:40,0:19:39.32:0,39,473	0/1:46,0:21:25.33:25,0,320	0/0:15,0:15:45.15:0,45,1368	0/0:18,0:18:54.18:0,54,1707	0/0:9,0:9:27.07:0,27,613	1/1:22,0:22:66.22:1686,66,0	0/0:7,0:7:21.07:0,21,404	0/0:10,0:10:24.08:0,24,672	0/0:4,0:4:12.04:0,12,311	0/0:6,0:6:18.06:0,18,448	0/0:7,0:7:21.07:0,21,638	0/0:5,0:5:12.04:0,12,396	0/0:11,0:11:33.11:0,33,939	0/0:11,0:11:27.09:0,27,537	1/1:4,9:16:18.06:881,18,0	0/0:24,0:24:66.21:0,66,1237	0/0:24,0:22:66.23:0,66,1671	0/0:1,0:1:3.01:0,3,85	0/0:9,0:9:24.08:0,24,525	./.	0/0:3,0:3:9.03:0,9,192	0/0:8,0:8:21.07:0,21,395	0/0:9,0:9:27.09:0,27,916	0/0:21,0:21:60.20:0,60,1733	0/0:10,0:10:27.09:0,27,902	0/0:5,0:5:15.05:0,15,509
chr10	57368748	.	CA	C	1487.70	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=6.266;DP=368;FS=17.975;HRun=5;HaplotypeScore=38.1359;InbreedingCoeff=0.9571;MQ=74.24;MQ0=0;MQRankSum=-2.974;QD=27.05;ReadPosRankSum=1.078;VQSLOD=1.6982;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:66.21:0,66,885	1/1:0,8:8:21.06:238,21,0	0/0:17,0:16:35.83:0,36,432	0/0:10,0:10:24.08:0,24,316	0/0:10,0:10:27.08:0,27,354	0/0:12,0:12:36.11:0,36,476	0/0:16,0:16:45.15:0,45,611	1/1:0,18:18:54.15:609,54,0	0/0:11,0:11:33.11:0,33,449	0/0:11,0:11:30.09:0,30,398	0/0:4,0:4:12.04:0,12,164	0/0:4,0:4:9.03:0,9,123	0/0:12,0:12:30.08:0,30,392	0/0:10,0:10:24.08:0,24,328	0/0:10,0:10:24.08:0,24,328	0/0:9,0:9:21.06:0,21,272	1/1:0,29:29:69.20:782,69,0	0/0:22,0:22:63.16:0,63,817	0/0:15,0:15:42.13:0,42,558	0/0:7,0:7:18.05:0,18,231	0/0:19,0:19:57.19:0,57,779	0/0:7,0:7:21.07:0,21,287	0/0:9,0:9:24.08:0,24,328	0/0:17,0:17:42.14:0,42,569	0/0:7,0:7:21.07:0,21,287	0/0:21,0:21:51.14:0,51,643	0/0:14,0:14:39.12:0,39,516	0/0:15,0:15:45.15:0,45,605
chr10	57368868	.	GTT	G	1406.36	PASS	AB=0.760;AC=20;AF=0.357;AN=56;BaseQRankSum=-1.521;DP=491;FS=4.369;HRun=17;HaplotypeScore=75.0743;InbreedingCoeff=0.5646;MQ=60.10;MQ0=3;MQRankSum=-0.169;QD=7.44;ReadPosRankSum=3.893;VQSLOD=0.4905;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:65.11:0,65,526	0/0:5,0:5:2.60:0,3,10	0/0:43,0:11:5.71:0,6,105	0/0:37,0:17:28.93:0,29,243	0/0:16,0:16:30.29:0,30,223	0/0:13,0:13:33.37:0,33,355	0/0:14,1:14:8.81:0,9,308	0/0:29,0:29:46.09:0,46,392	1/1:8,7:16:19.50:180,19,0	1/1:3,6:12:8.25:134,8,0	0/1:4,3:11:38:83,0,38	0/0:14,0:17:26.70:0,27,236	0/0:16,0:16:32.99:0,33,354	0/0:6,0:7:17.15:0,17,172	0/1:9,10:22:5.72:257,0,6	0/0:10,0:21:32.40:0,32,312	0/0:24,0:24:17.42:0,17,156	0/0:18,0:19:44.04:0,44,423	0/1:15,5:24:9.34:144,0,9	1/1:7,7:14:17.58:133,18,0	0/1:9,4:13:2.53:107,0,3	0/1:7,0:8:0.19:0,0,177	0/1:13,1:15:0.27:0,0,164	0/0:12,0:12:20.60:0,21,203	1/1:3,0:4:2.63:11,3,0	1/1:9,12:24:20.01:259,20,0	1/1:3,11:16:20.42:142,20,0	1/1:4,4:10:20.24:141,20,0
chr10	57369224	.	T	TAA	2239.74	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-8.507;DP=425;FS=1.122;HRun=10;HaplotypeScore=51.9968;InbreedingCoeff=0.8662;MQ=63.71;MQ0=2;MQRankSum=1.478;QD=31.55;ReadPosRankSum=-0.097;VQSLOD=3.6030;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:54.07:0,54,541	1/1:0,9:10:23.57:322,24,0	0/0:9,0:8:5.93:0,6,49	0/0:5,0:4:5.83:0,6,59	0/0:29,0:29:69.10:0,69,695	0/0:22,0:23:59.85:0,60,584	0/0:8,0:8:14.74:0,15,152	1/1:7,24:30:72.24:1066,72,0	0/0:13,0:13:30.04:0,30,305	0/0:15,0:15:42.09:0,42,427	0/0:18,0:19:41.81:0,42,469	0/0:13,0:13:36.05:0,36,359	0/0:9,0:9:24.04:0,24,244	0/0:8,0:8:24.05:0,24,244	0/0:9,0:9:24.05:0,24,244	0/0:13,0:13:36.08:0,36,366	1/1:4,24:30:68.72:993,69,0	0/0:18,0:18:41.59:0,42,426	0/0:18,0:16:39.03:0,39,381	0/0:25,0:25:75.16:0,75,756	0/0:8,0:8:21.04:0,21,214	0/0:3,0:4:8.76:0,9,73	0/0:14,0:14:33.07:0,33,336	0/0:3,0:5:5.72:0,6,42	0/0:17,0:19:35.78:0,36,418	0/0:16,0:16:42.09:0,42,427	0/0:17,0:18:47.80:0,48,470	0/0:14,0:14:36.05:0,36,366
chr10	57370047	.	CCACACACACACACACACA	C	1598.94	PASS	AB=1.000;AC=5;AF=0.093;AN=54;BaseQRankSum=4.704;DP=641;FS=2.157;HRun=0;HaplotypeScore=234.3336;InbreedingCoeff=0.8447;MQ=66.30;MQ0=74;MQRankSum=-5.531;QD=27.57;ReadPosRankSum=0.167;VQSLOD=2.8072;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:13,9:21:21.07:924,21,0	./.	0/0:69,0:21:27.43:0,27,1375	0/0:81,0:35:42:0,42,1459	1/1:5,13:16:18.06:792,18,0	0/0:14,0:17:24.55:0,25,1747	0/0:25,0:24:30.57:0,31,2027	0/0:28,0:24:17.76:0,18,272	0/0:20,0:15:33.11:0,33,2559	0/0:19,0:10:24.08:0,24,1676	0/0:15,0:13:30.10:0,30,2299	0/0:21,0:20:39.13:0,39,2776	0/0:17,0:20:49.05:0,49,3478	0/0:12,0:14:33.11:0,33,2410	0/0:20,0:16:33.11:0,33,2383	0/0:17,0:17:36.12:0,36,2840	0/1:18,0:13:0.28:0,0,36	0/0:17,0:18:45.15:0,45,2561	0/0:19,0:16:40.02:0,40,2568	0/0:11,0:9:18.06:0,18,1382	0/0:32,0:29:27.05:0,27,2058	0/0:20,0:20:24.07:0,24,1686	0/0:18,0:20:27.56:0,28,2223	0/0:28,0:29:72.68:0,73,5366	0/0:10,0:7:12.04:0,12,796	0/0:16,0:11:27.09:0,27,1991	0/0:23,0:21:45.15:0,45,3405	0/0:16,0:13:27.09:0,27,2129
chr10	57370049	.	A	AC	1030.71	PASS	AB=0.846;AC=13;AF=0.241;AN=54;BaseQRankSum=5.198;DP=671;FS=9.432;HRun=2;HaplotypeScore=113.9939;InbreedingCoeff=0.0619;MQ=64.95;MQ0=75;MQRankSum=-0.142;QD=4.91;ReadPosRankSum=0.409;VQSLOD=-0.1693;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:30.14:0,30,260	./.	0/0:69,0:21:55.96:0,56,628	0/0:82,0:35:63.53:0,64,895	0/0:18,0:16:20.22:0,20,145	0/0:22,0:21:35.71:0,36,389	0/0:25,0:24:51.15:0,51,636	1/1:27,3:26:35.14:408,35,0	0/1:15,5:15:61.50:62,0,63	0/1:14,7:12:59.86:141,0,60	0/0:15,1:14:12.99:0,13,104	0/0:24,0:23:54.17:0,54,692	0/0:21,0:21:53.83:0,54,626	0/0:14,0:14:38.81:0,39,439	0/1:17,4:17:35.68:136,0,36	0/0:18,0:18:38.92:0,39,459	1/1:16,2:13:7.08:54,7,0	0/0:21,0:20:56.09:0,56,620	0/1:14,5:16:99:145,0,165	0/1:13,1:12:9.47:9,0,34	0/0:36,1:34:9.70:0,10,166	0/0:19,0:19:36.07:0,36,430	0/0:19,0:19:30.09:0,30,387	0/0:32,0:32:76.38:0,76,945	0/1:8,2:7:22.19:22,0,74	0/1:17,3:15:74.10:74,0,121	0/1:20,2:20:69.01:69,0,113	0/1:13,2:12:22.06:69,0,22
chr10	57370050	.	CACACACACACA	C	1596.91	PASS	AB=0.911;AC=7;AF=0.130;AN=54;BaseQRankSum=6.288;DP=673;FS=0.615;HRun=0;HaplotypeScore=184.2345;InbreedingCoeff=0.4164;MQ=64.04;MQ0=76;MQRankSum=-1.310;QD=16.46;ReadPosRankSum=-2.150;VQSLOD=2.5111;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:21,0:20:99:371,0,142	./.	0/0:68,0:20:56.75:0,57,1150	0/0:81,0:35:82.75:0,83,1506	0/1:18,0:16:40.84:328,0,41	0/0:22,0:21:42.61:0,43,1567	0/0:25,0:24:54.18:0,54,1882	1/1:3,25:25:59.91:753,60,0	0/0:19,0:15:33.09:0,33,1693	0/0:21,0:13:2.99:0,3,1617	0/0:15,0:14:36.12:0,36,1849	0/0:25,0:24:63.19:0,63,2656	0/0:22,0:22:61.09:0,61,2682	0/0:14,0:14:39.12:0,39,1720	0/0:20,0:17:36.01:0,36,1650	0/0:18,0:18:42.14:0,42,2092	1/1:5,11:13:9.03:261,9,0	0/0:21,0:20:58.97:0,59,1920	0/0:19,0:16:8.57:0,9,1824	0/0:14,0:12:27.09:0,27,1347	0/0:37,0:34:41.85:0,42,2162	0/0:19,0:19:36.07:0,36,1335	0/0:19,0:19:30.10:0,30,1576	0/0:32,0:32:88.18:0,88,4241	0/1:7,0:7:19.23:19,0,551	0/0:19,0:15:4.97:0,5,1933	0/0:19,0:20:48.16:0,48,2402	0/0:14,0:13:30.10:0,30,1524
chr10	57370203	.	T	TC	1897.12	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-4.194;DP=343;FS=10.797;HRun=1;HaplotypeScore=50.5941;InbreedingCoeff=0.9670;MQ=66.40;MQ0=7;MQRankSum=2.163;QD=15.81;ReadPosRankSum=-0.926;VQSLOD=2.0594;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:3,0:3:5.91:0,6,38	0/0:6,0:6:14.95:0,15,117	0/0:19,0:9:17.25:0,17,189	0/0:22,0:18:20.54:0,21,235	0/0:8,0:8:14.92:0,15,114	0/0:13,0:14:35.66:0,36,275	0/0:16,0:16:39.93:0,40,282	0/0:16,0:16:41.77:0,42,348	1/1:10,0:10:29.63:203,30,0	1/1:1,17:18:47.95:404,48,0	1/1:9,0:9:17.91:142,18,0	0/0:16,0:16:38.57:0,39,271	0/0:13,0:13:23.75:0,24,166	0/0:12,0:11:23.54:0,24,150	1/1:13,0:12:29.36:192,29,0	0/0:12,0:12:22.55:0,23,151	0/0:14,0:14:23.87:0,24,191	0/0:10,0:10:22.41:0,22,156	1/1:7,0:7:17.32:125,17,0	1/1:14,0:14:35.83:283,36,0	1/1:12,0:11:32.79:245,33,0	0/0:13,0:13:23.69:0,24,173	0/0:9,0:9:20.84:0,21,160	0/0:20,0:19:41.44:0,41,274	1/1:12,0:12:17.76:138,18,0	1/1:10,0:10:17.81:141,18,0	1/1:6,0:6:14.85:108,15,0	1/1:9,0:9:20.16:139,20,0
chr10	57371439	.	CG	C	675.50	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=5.942;DP=635;FS=1.665;HRun=5;HaplotypeScore=93.6993;InbreedingCoeff=0.9913;MQ=72.72;MQ0=0;MQRankSum=-6.052;QD=16.48;ReadPosRankSum=-1.355;VQSLOD=3.1304;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:84.26:0,84,1125	1/1:1,8:9:21.05:225,21,0	0/0:17,0:17:47.36:0,47,591	0/0:16,0:16:43.32:0,43,521	0/0:18,0:18:45.13:0,45,597	0/0:24,0:24:66.19:0,66,866	0/0:31,0:31:90.26:0,90,1209	1/1:5,5:9:15.03:161,15,0	0/0:23,0:23:60.20:0,60,820	0/0:21,0:21:57.19:0,57,772	0/0:14,0:14:42.13:0,42,558	0/0:36,0:36:99:0,105,1431	0/0:24,0:24:69.23:0,69,942	0/0:23,0:23:60.16:0,60,798	0/0:36,0:36:99:0,99,1331	0/0:23,0:23:66.22:0,66,898	1/1:7,15:20:38.78:429,39,0	0/0:23,0:23:63.19:0,63,843	0/0:24,0:24:66.21:0,66,887	0/0:19,0:18:48.11:0,48,617	0/0:46,0:46:99:0,135,1845	0/0:21,0:21:63.20:0,63,842	0/0:25,0:25:66.22:0,66,902	0/0:24,0:24:63.21:0,63,860	0/0:20,0:20:60.20:0,60,818	0/0:24,0:24:72.24:0,72,979	0/0:23,0:23:57.19:0,57,779	0/0:8,0:8:21.06:0,21,271
chr10	57371446	.	AGGG	A	978.49	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.160;DP=641;FS=0.000;HRun=5;HaplotypeScore=120.7649;InbreedingCoeff=0.9884;MQ=79.59;MQ0=0;MQRankSum=-7.831;QD=26.45;ReadPosRankSum=-1.245;VQSLOD=0.2091;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:86.31:0,86,1838	1/1:1,9:10:26.83:409,27,0	0/0:19,0:19:54.18:0,54,1125	0/0:23,0:24:59.82:0,60,1171	0/0:19,0:19:54.17:0,54,1185	0/0:26,0:26:78.22:0,78,1711	0/0:32,0:32:90.29:0,90,1965	1/1:1,5:5:12.04:199,12,0	0/0:24,0:24:66.18:0,66,1453	0/0:19,0:19:57.20:0,57,1308	0/0:15,0:15:39.13:0,39,899	0/0:35,0:35:99:0,102,2288	0/0:24,0:24:72.23:0,72,1613	0/0:23,0:23:69.17:0,69,1421	0/0:35,0:35:99:0,102,2309	0/0:22,0:22:66.17:0,66,1425	1/1:11,10:19:35.75:509,36,0	0/0:23,0:23:66.19:0,66,1351	0/0:25,0:25:69.19:0,69,1452	0/0:17,0:16:45.15:0,45,1035	0/0:49,0:49:99:0,138,2953	0/0:19,0:19:51.18:0,51,1167	0/0:23,0:23:69.22:0,69,1519	0/0:24,0:24:72.25:0,72,1634	0/0:20,0:20:60.15:0,60,1266	0/0:25,0:25:75.20:0,75,1562	0/0:22,0:22:63.22:0,63,1434	0/0:11,0:11:33.11:0,33,723
chr10	57371448	.	G	GA	169.99	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.206;DP=644;FS=0.757;HRun=0;HaplotypeScore=101.2083;InbreedingCoeff=0.9826;MQ=80.16;MQ0=0;MQRankSum=-7.846;QD=5.00;ReadPosRankSum=-1.372;VQSLOD=2.7256;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:86.26:0,86,1123	1/1:10,0:10:21.72:79,22,0	0/0:18,0:18:53.49:0,53,668	0/0:26,0:26:56.65:0,57,710	0/0:20,0:20:54.17:0,54,734	0/0:26,0:26:78.17:0,78,1039	0/0:30,0:30:90.24:0,90,1212	1/1:5,1:5:10.39:41,10,0	0/0:23,0:23:63.21:0,63,880	0/0:19,0:19:57.19:0,57,791	0/0:15,0:15:39.13:0,39,545	0/0:38,0:38:99:0,105,1431	0/0:24,0:24:72.23:0,72,988	0/0:23,0:23:69.16:0,69,886	0/0:34,0:34:99:0,102,1410	0/0:23,0:23:69.13:0,69,902	1/1:15,3:18:32.10:188,32,0	0/0:23,0:23:66.15:0,66,850	0/0:26,0:26:75.15:0,75,956	0/0:17,0:16:45.15:0,45,625	0/0:47,0:47:99:0,141,1864	0/0:20,0:20:57.16:0,57,761	0/0:23,0:23:69.18:0,69,926	0/0:24,0:24:72.24:0,72,1003	0/0:22,0:22:63.13:0,63,808	0/0:25,0:25:75.16:0,75,971	0/0:23,0:23:63.21:0,63,866	0/0:11,0:11:33.08:0,33,438
chr10	57371770	.	GTC	G	1340.91	PASS	AB=0.895;AC=24;AF=0.429;AN=56;BaseQRankSum=10.546;DP=623;FS=18.335;HRun=0;HaplotypeScore=151.1354;InbreedingCoeff=0.4521;MQ=46.63;MQ0=17;MQRankSum=-6.894;QD=4.31;ReadPosRankSum=-2.786;VQSLOD=1.4816;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:36,2:36:49.45:113,0,49	0/0:6,0:6:12.03:0,12,138	0/1:23,0:6:9.28:9,0,60	0/0:25,0:6:9.50:0,9,106	1/1:16,0:16:14.94:116,15,0	0/0:24,4:27:50.77:0,51,663	0/0:40,0:40:96.45:0,96,1152	0/0:17,0:12:27:0,27,263	1/1:13,2:15:1.01:82,1,0	0/1:21,3:23:22.62:214,0,23	0/1:4,0:3:0:0,0,0	0/0:29,0:27:46.53:0,47,730	0/0:24,0:23:54.07:0,54,733	0/0:33,0:33:83.81:0,84,928	0/1:15,2:18:7.71:54,0,8	1/1:11,6:17:18.07:175,18,0	0/0:14,0:14:11.48:0,11,205	0/1:11,5:16:5.58:181,0,6	1/1:14,0:10:19.04:122,19,0	0/1:11,5:15:9.64:31,0,10	1/1:52,2:52:6.78:43,7,0	0/0:28,0:26:69.11:0,69,1037	0/0:10,0:9:13.39:0,13,186	0/0:57,0:55:99:0,143,2041	1/1:13,3:15:5.82:38,6,0	0/1:20,0:16:0.10:160,0,0	1/1:5,3:7:10.52:87,11,0	1/1:9,0:9:17.20:102,17,0
chr10	57371774	.	GTC	G	1256.69	PASS	AB=0.962;AC=22;AF=0.393;AN=56;BaseQRankSum=10.845;DP=603;FS=10.723;HRun=0;HaplotypeScore=154.2376;InbreedingCoeff=0.4296;MQ=45.27;MQ0=18;MQRankSum=-6.710;QD=4.50;ReadPosRankSum=-3.050;VQSLOD=1.8887;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:37,0:35:50.97:111,0,51	0/0:5,0:5:8.96:0,9,97	0/0:17,0:4:5.89:0,6,57	0/0:23,0:5:5.20:0,5,46	1/1:16,0:16:10.62:64,11,0	0/0:24,0:23:47.94:0,48,762	0/0:37,0:37:99:0,102,1691	0/0:14,0:9:27.07:0,27,344	1/1:15,2:16:1.92:80,2,0	0/1:23,1:23:29.83:236,0,30	0/1:4,0:4:0:0,0,0	0/0:29,0:27:60.20:0,60,973	0/0:27,0:26:63.13:0,63,1016	0/0:32,0:32:81.24:0,81,1330	0/1:17,2:17:7.66:55,0,8	1/1:13,2:15:17.59:174,18,0	0/0:14,0:14:13.72:0,14,216	0/1:13,1:14:8.71:159,0,9	1/1:14,0:11:19.45:120,19,0	0/1:16,2:17:5.87:47,0,6	0/1:51,0:49:10.16:33,0,10	0/0:31,0:29:69.23:0,69,1252	0/0:12,0:11:24.07:0,24,370	0/0:59,0:57:99:0,162,2761	1/1:13,2:14:6.27:39,6,0	0/1:19,0:16:0.46:155,0,0	1/1:7,0:6:10.46:79,10,0	1/1:9,0:9:13.75:86,14,0
chr10	57371780	.	CT	C	184.43	PASS	AB=0.903;AC=5;AF=0.089;AN=56;BaseQRankSum=3.014;DP=593;FS=5.105;HRun=1;HaplotypeScore=157.9969;InbreedingCoeff=0.3183;MQ=44.27;MQ0=20;MQRankSum=-2.735;QD=4.73;ReadPosRankSum=0.037;VQSLOD=0.1591;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:32:42.60:0,43,443	1/1:1,4:5:6.02:83,6,0	0/0:15,0:1:3.01:0,3,44	0/0:26,0:6:11.93:0,12,92	0/0:17,0:17:20.67:0,21,192	0/0:24,0:23:42.01:0,42,628	0/0:38,0:38:99:0,108,1650	0/1:10,1:6:23.66:24,0,215	0/0:14,0:13:10.06:0,10,98	0/0:23,0:22:59.46:0,59,547	0/1:4,0:4:0:0,0,0	0/0:30,0:26:60.20:0,60,929	0/0:25,0:24:60.20:0,60,932	0/0:31,0:31:81.24:0,81,1224	0/0:18,0:16:6.40:0,6,64	0/0:15,0:15:13.22:0,13,62	0/1:14,5:18:41.69:182,0,42	0/0:14,0:14:30.04:0,30,286	0/0:13,0:10:29.80:0,30,284	0/0:19,0:18:17.94:0,18,170	0/0:50,0:47:7.81:0,8,41	0/0:27,0:25:69.23:0,69,1087	0/0:11,0:10:27.09:0,27,414	0/0:57,0:55:99:0,160,2497	0/0:17,0:16:8.48:0,8,79	0/0:19,0:17:44.66:0,45,412	0/0:10,0:9:19.90:0,20,171	0/0:6,0:6:17.93:0,18,174
chr10	57371792	.	CT	C	81.90	PASS	AB=0.896;AC=4;AF=0.071;AN=56;BaseQRankSum=1.116;DP=590;FS=1.660;HRun=1;HaplotypeScore=151.1787;InbreedingCoeff=0.2122;MQ=46.50;MQ0=21;MQRankSum=-3.581;QD=2.48;ReadPosRankSum=0.083;VQSLOD=-0.5615;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:36:67.47:0,67,888	0/1:4,0:4:0:0,0,0	0/0:12,1:1:3.01:0,3,44	0/0:24,0:8:17.62:0,18,263	0/0:25,0:25:39.04:0,39,490	0/0:25,0:24:45.15:0,45,699	0/0:41,0:41:99:0,117,1798	0/1:12,6:11:99:140,0,101	0/0:16,0:15:12.99:0,13,117	0/0:19,0:17:44.76:0,45,354	0/1:6,0:5:0:0,0,0	0/0:28,0:25:54.14:0,54,790	0/0:23,0:22:54.18:0,54,839	0/0:30,0:30:78.24:0,78,1173	0/0:14,0:12:8.47:0,8,72	0/0:13,0:13:22.25:0,22,279	0/0:20,2:21:9.86:0,10,521	0/0:13,0:13:26.83:0,27,314	0/0:9,0:6:17.97:0,18,170	0/0:16,0:15:11.97:0,12,115	0/0:41,0:38:15.48:0,15,176	0/0:33,0:32:87.30:0,87,1349	0/0:13,0:12:33.11:0,33,503	0/0:55,0:54:99:0,156,2399	0/0:16,0:15:11.41:0,11,97	0/0:19,0:17:49.61:0,50,479	0/0:11,0:10:19.93:0,20,196	0/1:4,1:5:29.75:30,0,55
chr10	57371808	.	CT	C	459.21	PASS	AB=0.559;AC=5;AF=0.089;AN=56;BaseQRankSum=7.827;DP=638;FS=7.351;HRun=1;HaplotypeScore=149.2540;InbreedingCoeff=0.6455;MQ=55.35;MQ0=18;MQRankSum=-7.456;QD=10.93;ReadPosRankSum=0.161;VQSLOD=1.4723;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:41:81.58:0,82,1038	1/1:0,3:3:2.92:17,3,0	0/0:27,0:14:42.12:0,42,558	0/0:28,0:15:39.08:0,39,501	0/0:34,0:34:66.08:0,66,850	0/0:22,0:22:42.12:0,42,621	0/0:42,0:42:99:0,117,1747	1/1:6,14:16:7.15:296,7,0	0/0:20,0:19:29.93:0,30,390	0/0:15,0:14:38.17:0,38,517	0/0:9,0:8:5.83:0,6,84	0/0:31,0:29:60.20:0,60,894	0/0:25,0:24:57.19:0,57,845	0/0:26,0:26:75.24:0,75,1128	0/0:16,0:15:24.50:0,24,299	0/0:16,0:16:31:0,31,410	0/1:4,15:19:5.72:254,0,6	0/0:12,0:12:23.85:0,24,290	0/0:12,0:10:30.01:0,30,320	0/0:16,0:15:21.44:0,21,332	0/0:38,0:36:30.57:0,31,424	0/0:39,0:39:99:0,108,1627	0/0:16,0:15:39.13:0,39,578	0/0:50,0:49:99:0,144,2187	0/0:23,0:23:38.67:0,39,535	0/0:20,0:19:54.10:0,54,644	0/0:14,0:12:30.10:0,30,417	0/0:3,0:3:9:0,9,80
chr10	57371812	.	C	CT	958.75	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=7.927;DP=645;FS=2.110;HRun=1;HaplotypeScore=150.6414;InbreedingCoeff=0.8634;MQ=57.23;MQ0=18;MQRankSum=-7.612;QD=19.97;ReadPosRankSum=-1.152;VQSLOD=3.4516;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,1:40:81.69:0,82,1102	1/1:0,3:3:3.01:45,3,0	0/0:28,0:15:42.12:0,42,541	0/0:31,0:18:44.86:0,45,546	0/0:34,0:34:66.22:0,66,911	0/0:21,0:21:42.03:0,42,582	0/0:43,0:43:99:0,120,1652	1/1:10,14:21:48.31:620,48,0	0/0:19,0:18:31.75:0,32,397	0/0:18,0:17:38.77:0,39,563	0/0:11,0:10:11.97:0,12,145	0/0:29,0:27:57.08:0,57,781	0/0:21,0:21:49.41:0,49,664	0/0:26,0:26:78.26:0,78,1087	0/0:15,0:15:26.92:0,27,339	0/0:16,0:16:29.56:0,30,452	1/1:6,15:20:6.67:417,7,0	0/0:12,0:12:21.02:0,21,321	0/0:12,0:10:30.10:0,30,409	0/0:16,0:16:29.84:0,30,386	0/0:42,0:40:33.11:0,33,459	0/0:37,0:37:99:0,102,1416	0/0:16,0:15:45.15:0,45,612	0/0:45,0:45:99:0,132,1841	0/0:24,0:24:38.97:0,39,543	0/0:21,0:20:57.14:0,57,767	0/0:15,0:13:30.10:0,30,416	0/0:3,0:3:9.03:0,9,122
chr10	57371839	.	TA	T	1925.48	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=6.960;DP=729;FS=6.993;HRun=2;HaplotypeScore=142.2062;InbreedingCoeff=0.9974;MQ=76.89;MQ0=0;MQRankSum=-5.683;QD=30.09;ReadPosRankSum=-1.266;VQSLOD=2.3280;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,117,1678	1/1:0,8:8:21.07:272,21,0	0/0:24,0:23:62.70:0,63,899	0/0:29,0:29:78.26:0,78,1145	0/0:37,0:37:99:0,99,1470	0/0:21,0:21:60.20:0,60,899	0/0:39,0:39:99:0,117,1683	1/1:4,22:26:66.20:842,66,0	0/0:27,0:27:78.21:0,78,1122	0/0:27,0:27:78.26:0,78,1169	0/0:16,0:16:41.85:0,42,559	0/0:28,0:28:81.27:0,81,1214	0/0:24,0:24:66.17:0,66,926	0/0:28,0:28:75.25:0,75,1123	0/0:16,0:16:42.10:0,42,604	0/0:14,0:14:35.92:0,36,539	1/1:0,30:30:75.20:953,75,0	0/0:12,0:12:27.09:0,27,404	0/0:21,0:21:60.19:0,60,880	0/0:24,0:24:69.23:0,69,1033	0/0:55,0:55:99:0,129,1783	0/0:34,0:34:90.26:0,90,1307	0/0:21,0:21:60.20:0,60,899	0/0:39,0:39:99:0,117,1708	0/0:28,0:28:74.76:0,75,1098	0/0:30,0:30:87.29:0,87,1303	0/0:19,0:18:54.13:0,54,764	0/0:9,0:9:24.08:0,24,360
chr10	57372865	.	TTC	T	3192.65	PASS	AB=0.986;AC=21;AF=0.375;AN=56;BaseQRankSum=1.540;DP=528;FS=11.094;HRun=0;HaplotypeScore=85.7224;InbreedingCoeff=0.4597;MQ=78.57;MQ0=2;MQRankSum=-2.328;QD=11.28;ReadPosRankSum=-0.031;VQSLOD=2.6568;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:62.95:0,63,798	1/1:15,1:16:42.05:429,42,0	0/0:27,0:23:13.88:0,14,304	0/0:20,0:17:21.88:0,22,229	0/0:27,0:27:72.03:0,72,858	0/0:16,0:16:41.94:0,42,467	0/0:9,0:9:27.07:0,27,358	1/1:18,1:18:42.05:404,42,0	0/1:14,1:15:5.45:161,0,5	1/1:22,1:23:10.44:324,10,0	1/1:16,1:17:2.13:192,2,0	0/0:13,0:13:29.83:0,30,305	0/0:15,0:15:38.21:0,38,428	0/0:14,0:14:29.96:0,30,401	0/1:19,0:19:35.08:57,0,35	0/0:24,0:24:65.98:0,66,863	1/1:24,1:25:63.06:638,63,0	0/0:16,0:16:39.43:0,39,483	0/1:25,0:25:5.21:196,0,5	0/1:25,1:26:26.75:187,0,27	0/1:8,0:8:15.17:39,0,15	0/0:19,0:19:51.01:0,51,596	0/0:11,0:11:29.97:0,30,349	0/0:10,0:10:27.03:0,27,373	0/1:34,0:34:23.26:251,0,23	1/1:21,0:21:17.07:245,17,0	1/1:18,0:18:12.94:201,13,0	0/1:17,0:17:48.08:65,0,48
chr10	57372869	.	CTCT	C	2526.71	PASS	AB=0.995;AC=16;AF=0.286;AN=56;BaseQRankSum=-0.257;DP=569;FS=0.843;HRun=0;HaplotypeScore=107.2880;InbreedingCoeff=0.1247;MQ=72.08;MQ0=4;MQRankSum=-2.892;QD=8.65;ReadPosRankSum=1.550;VQSLOD=3.0068;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:71.78:0,72,1091	1/1:5,10:15:42.06:576,42,0	0/0:26,0:19:30.42:0,30,438	0/0:18,0:14:32.02:0,32,313	0/0:26,0:27:73:0,73,1100	0/0:18,0:18:48.07:0,48,656	0/0:12,0:12:34.60:0,35,509	1/1:13,6:18:41.82:461,42,0	0/1:20,0:20:99:113,0,147	0/1:26,0:26:99:123,0,135	0/1:17,0:19:85.29:85,0,132	0/0:13,0:13:33.51:0,34,426	0/0:15,0:15:41.18:0,41,555	0/0:14,0:14:38.75:0,39,556	0/0:22,0:23:5.92:0,6,271	0/0:24,0:24:69.18:0,69,1176	1/1:9,12:24:62.87:846,63,0	0/0:18,0:18:46.62:0,47,683	0/1:23,0:23:99:113,0,140	0/1:28,0:29:18.58:19,0,284	0/1:8,0:8:28.51:29,0,111	0/0:20,0:20:51.02:0,51,760	0/0:14,0:14:39.03:0,39,533	0/0:10,0:10:27.03:0,27,475	0/1:40,0:40:84.46:84,0,331	0/1:29,0:29:99:153,0,152	0/1:19,0:20:93.12:93,0,122	0/1:19,1:20:6.37:6,0,267
chr10	57372870	.	TC	T	5836.24	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=3.736;DP=579;FS=13.592;HRun=1;HaplotypeScore=82.2393;InbreedingCoeff=0.9908;MQ=71.95;MQ0=4;MQRankSum=-2.577;QD=18.30;ReadPosRankSum=-2.442;VQSLOD=3.5093;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:43.19:0,43,591	1/1:15,0:15:41.96:360,42,0	0/0:26,0:19:16.38:0,16,219	0/0:17,0:14:25.18:0,25,206	0/0:26,0:26:54.63:0,55,629	0/0:17,0:17:46.27:0,46,379	0/0:15,0:15:11.31:0,11,264	1/1:18,1:18:41.99:367,42,0	1/1:19,2:21:45.99:342,46,0	1/1:23,4:27:66.93:544,67,0	1/1:18,1:19:48.52:319,49,0	0/0:15,1:16:28.81:0,29,231	0/0:15,0:15:31:0,31,322	0/0:15,0:15:32.70:0,33,328	1/1:21,2:23:54.20:346,54,0	0/0:25,0:25:67.41:0,67,657	1/1:25,0:25:64.47:540,64,0	0/0:18,0:18:21.94:0,22,342	1/1:18,5:23:59.40:490,59,0	1/1:24,5:29:62.20:460,62,0	1/1:8,0:8:16.34:81,16,0	0/0:20,0:20:50.79:0,51,444	0/0:14,0:14:35:0,35,325	0/0:10,0:10:26.98:0,27,284	1/1:35,4:39:91.41:688,91,0	1/1:29,0:29:74.48:553,74,0	1/1:17,4:21:48.87:410,49,0	1/1:19,2:21:45.74:336,46,0
chr10	57372871	.	CT	C	261.58	PASS	AB=0.937;AC=14;AF=0.250;AN=56;BaseQRankSum=7.798;DP=605;FS=7.003;HRun=16;HaplotypeScore=108.5300;InbreedingCoeff=0.2346;MQ=70.05;MQ0=6;MQRankSum=-1.703;QD=1.10;ReadPosRankSum=6.236;VQSLOD=-0.5272;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,2:27:17.41:0,17,347	1/1:14,0:14:23.83:89,24,0	0/1:29,3:18:16.52:41,0,17	0/1:18,1:14:5.38:5,0,61	0/0:25,1:27:27.61:0,28,315	0/1:17,2:21:6.22:6,0,159	0/0:13,0:14:34.52:0,35,251	1/1:18,0:17:9.74:35,10,0	0/0:22,1:23:8.10:0,8,189	0/0:26,0:26:7.09:0,7,207	0/0:19,0:19:14.62:0,15,167	0/1:14,3:18:19.90:20,0,151	0/0:15,1:16:2.84:0,3,117	0/0:14,0:15:23.36:0,23,201	0/0:23,0:23:26.06:0,26,277	0/0:20,3:24:20.77:0,21,381	1/1:24,1:26:45.91:183,46,0	0/1:15,2:19:5.28:5,0,176	0/1:23,0:23:15.94:16,0,161	0/0:33,0:33:12.86:0,13,278	0/0:8,0:8:17.92:0,18,136	0/0:16,0:20:17.87:0,18,138	0/0:14,1:15:11.89:0,12,196	0/0:10,0:10:20.97:0,21,174	0/0:39,0:40:27.39:0,27,338	0/0:28,0:28:34.29:0,34,192	0/1:22,0:22:18.47:18,0,135	0/1:25,0:25:4.06:4,0,268
chr10	57372938	.	TA	T	2214.35	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=10.512;DP=537;FS=0.000;HRun=2;HaplotypeScore=63.6053;InbreedingCoeff=0.9938;MQ=75.49;MQ0=0;MQRankSum=-3.873;QD=35.15;ReadPosRankSum=-0.644;VQSLOD=3.6234;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:90.29:0,90,1325	1/1:0,5:5:15.05:195,15,0	0/0:23,0:23:65.84:0,66,912	0/0:22,0:22:60.18:0,60,814	0/0:14,0:14:42.07:0,42,600	0/0:19,0:19:54.16:0,54,769	0/0:15,0:15:45.15:0,45,673	1/1:1,28:29:81.26:1051,81,0	0/0:16,0:16:48.16:0,48,719	0/0:20,0:20:57.19:0,57,854	0/0:18,0:18:54.15:0,54,785	0/0:24,0:24:72.23:0,72,1059	0/0:18,0:18:54.18:0,54,808	0/0:11,0:11:30.10:0,30,433	0/0:25,0:25:75.24:0,75,1102	0/0:16,0:16:39.13:0,39,584	1/1:0,29:29:87.24:1110,87,0	0/0:17,0:17:51.16:0,51,744	0/0:32,0:32:93.29:0,93,1354	0/0:20,0:20:60.18:0,60,860	0/0:22,0:22:66.19:0,66,948	0/0:19,0:19:54.18:0,54,806	0/0:13,0:13:36.07:0,36,513	0/0:15,0:15:45.15:0,45,674	0/0:14,0:14:39.13:0,39,583	0/0:25,0:25:75.24:0,75,1087	0/0:15,0:14:45.15:0,45,674	0/0:10,0:10:30.10:0,30,449
chr10	57374422	.	ACC	A	4066.21	PASS	AB=1.000;AC=31;AF=0.554;AN=56;BaseQRankSum=1.777;DP=417;FS=33.351;HRun=12;HaplotypeScore=68.5477;InbreedingCoeff=0.7770;MQ=80.17;MQ0=0;MQRankSum=-1.242;QD=15.82;ReadPosRankSum=4.939;VQSLOD=0.0956;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:16,16:32:26.74:256,27,0	0/0:6,0:6:5.99:0,6,57	0/0:29,0:23:17.74:0,18,310	0/0:20,0:19:10.72:0,11,236	1/1:6,5:11:24.04:241,24,0	0/0:7,0:8:6.02:0,6,84	0/0:20,0:24:36.58:0,37,411	0/0:15,0:15:12.04:0,12,171	1/1:4,7:11:5.97:61,6,0	1/1:8,17:26:41.70:470,42,0	1/1:4,8:13:17.75:235,18,0	0/1:6,0:6:21.43:21,0,80	0/0:7,0:7:6.01:0,6,70	0/0:6,0:6:3.01:0,3,45	1/1:5,11:16:36.04:366,36,0	1/1:2,16:18:42.09:427,42,0	0/0:19,0:19:38.48:0,38,449	1/1:3,15:19:47.83:468,48,0	1/1:5,10:15:27.03:273,27,0	1/1:0,7:7:21.05:213,21,0	1/1:14,21:35:45.01:456,45,0	0/0:5,0:5:11.71:0,12,179	0/0:4,0:4:3.01:0,3,45	0/0:16,0:16:18.06:0,18,258	1/1:9,3:12:5.98:61,6,0	1/1:5,8:12:18.02:183,18,0	1/1:9,8:17:24:242,24,0	1/1:2,4:6:9.02:92,9,0
chr10	57374487	.	ACTG	A	48.43	PASS	AB=0.979;AC=6;AF=0.111;AN=54;BaseQRankSum=0.942;DP=417;FS=1.284;HRun=0;HaplotypeScore=105.3253;InbreedingCoeff=0.0637;MQ=58.67;MQ0=11;MQRankSum=-1.950;QD=0.53;ReadPosRankSum=-4.814;VQSLOD=-0.1158;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:17:12.02:0,12,199	0/0:7,0:7:14.57:0,15,195	0/1:15,0:13:3.63:4,0,515	0/0:21,0:18:44.33:0,44,952	0/0:14,0:14:9.02:0,9,161	0/0:9,0:7:12.04:0,12,262	0/0:24,0:24:38.25:0,38,789	0/0:24,0:20:57.16:0,57,852	1/1:9,1:9:2.60:13,3,0	0/1:27,1:26:48.98:49,0,453	0/1:19,0:18:11.51:12,0,123	0/0:13,0:13:25.64:0,26,528	0/0:10,0:10:23.81:0,24,471	0/0:6,0:6:12.04:0,12,272	0/0:21,3:22:3.53:0,4,168	0/0:12,0:12:18.05:0,18,368	0/0:19,0:18:43.25:0,43,570	0/0:9,0:9:24.08:0,24,500	0/0:16,0:13:4.09:0,4,405	0/0:8,1:8:3.01:0,3,41	0/0:17,1:14:6.02:0,6,78	0/0:7,0:7:12.04:0,12,244	0/0:6,0:6:15.05:0,15,308	0/0:16,0:15:24.08:0,24,506	./.	0/1:19,1:18:78.99:79,0,216	0/0:20,0:20:37.17:0,37,352	0/0:9,0:9:11.43:0,11,150
chr10	57374502	.	G	GCTA	1509.92	PASS	AB=0.936;AC=28;AF=0.538;AN=52;BaseQRankSum=4.326;DP=396;FS=3.820;HRun=0;HaplotypeScore=94.4454;InbreedingCoeff=0.6067;MQ=40.91;MQ0=17;MQRankSum=-4.347;QD=6.02;ReadPosRankSum=-1.510;VQSLOD=2.2494;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:15:5.94:43,6,0	1/1:7,0:7:12.39:91,12,0	0/0:7,0:5:12.02:0,12,114	0/0:16,0:13:32.16:0,32,321	1/1:13,0:13:3:25,3,0	0/0:12,0:10:8.73:0,9,57	0/0:27,0:27:39.86:0,40,438	1/1:19,0:12:20.12:198,20,0	0/1:8,2:9:0.37:0,0,2	1/1:27,0:23:37.46:249,37,0	1/1:15,0:13:2.99:25,3,0	0/0:14,0:14:21.48:0,21,227	0/0:11,0:11:13.17:0,13,200	0/0:8,0:8:11.79:0,12,125	1/1:19,2:19:6.01:80,6,0	1/1:10,2:12:14.97:122,15,0	1/1:21,0:20:43.08:302,43,0	1/1:6,0:6:11.32:90,11,0	1/1:15,0:11:20.29:156,20,0	./.	1/1:20,0:14:2.99:24,3,0	0/0:8,0:7:5.95:0,6,44	0/0:4,0:4:11.81:0,12,85	0/0:13,1:13:21:0,21,239	./.	0/1:21,0:16:1.71:97,0,2	0/1:18,1:20:49.15:131,0,49	0/1:8,0:8:15.53:63,0,16
chr10	57375260	.	A	AC	147.83	PASS	AB=0.775;AC=7;AF=0.125;AN=56;BaseQRankSum=6.591;DP=392;FS=18.431;HRun=0;HaplotypeScore=86.8956;InbreedingCoeff=-0.1259;MQ=74.83;MQ0=0;MQRankSum=-5.509;QD=1.49;ReadPosRankSum=5.382;VQSLOD=0.3244;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:18,2:20:6:0,6,76	0/0:5,0:5:6.02:0,6,83	0/0:14,0:10:42.12:0,42,532	0/0:16,0:13:44.60:0,45,546	0/0:19,1:20:17.56:0,18,250	0/0:13,0:13:12:0,12,144	0/0:15,0:15:18.06:0,18,251	0/0:11,0:11:33.11:0,33,450	0/0:13,3:16:9.03:0,9,126	0/1:10,5:15:78.85:79,0,374	0/1:8,5:13:0.07:0,0,0	0/0:13,0:13:5.90:0,6,83	0/0:11,1:12:6.02:0,6,81	0/0:8,0:8:6:0,6,84	0/0:13,3:16:8.93:0,9,125	0/0:12,0:12:2.56:0,3,41	0/0:16,0:16:24.07:0,24,310	0/1:6,1:6:7.37:7,0,152	0/0:15,1:16:23.43:0,23,577	0/0:15,2:17:2.08:0,2,41	0/0:23,0:23:27.54:0,28,366	0/0:7,0:7:3.01:0,3,42	0/0:10,0:10:3.01:0,3,42	0/0:13,0:13:5.71:0,6,61	0/1:9,7:16:22.16:22,0,75	0/1:13,5:18:62.37:62,0,490	0/1:12,9:21:23.87:82,0,24	0/1:8,1:9:10.63:11,0,255
chr10	57375263	.	C	CTA	295.18	PASS	AB=0.790;AC=6;AF=0.107;AN=56;BaseQRankSum=6.645;DP=417;FS=23.488;HRun=0;HaplotypeScore=99.6232;InbreedingCoeff=-0.1778;MQ=74.79;MQ0=0;MQRankSum=-6.408;QD=3.32;ReadPosRankSum=3.966;VQSLOD=0.2634;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,2:22:20.82:0,21,225	0/0:5,0:5:9:0,9,119	0/0:15,0:11:45.15:0,45,730	0/0:16,0:13:45.10:0,45,704	0/0:19,1:20:17.79:0,18,294	0/0:14,0:14:18.06:0,18,293	0/0:17,0:17:23.49:0,23,338	0/0:12,0:12:33.11:0,33,538	0/0:13,3:16:11.93:0,12,167	0/1:11,5:16:99:169,0,427	0/0:9,5:14:2.79:0,3,47	0/0:14,0:14:5.95:0,6,98	0/0:11,1:12:6.02:0,6,98	0/0:8,0:8:6.02:0,6,98	0/0:14,3:17:8.89:0,9,147	0/0:13,0:13:3.48:0,3,50	0/0:17,0:17:38.50:0,38,510	0/1:7,1:7:11.33:11,0,202	0/0:21,1:22:28.19:0,28,810	0/0:18,2:20:6.13:0,6,75	0/0:23,0:23:26.11:0,26,439	0/0:7,0:7:3.01:0,3,49	0/0:11,0:11:6.02:0,6,93	0/0:13,0:13:5.82:0,6,98	0/1:10,7:17:29.80:30,0,127	0/1:13,5:18:96.71:97,0,571	0/1:12,9:21:50.03:85,0,50	0/1:8,1:9:22.98:23,0,306
chr10	57376149	.	TTTGATTGATTGATTGA	T	12837.79	PASS	AB=0.964;AC=31;AF=0.574;AN=54;BaseQRankSum=12.383;DP=528;FS=4.774;HRun=0;HaplotypeScore=246.1311;InbreedingCoeff=0.8386;MQ=63.57;MQ0=3;MQRankSum=-11.312;QD=43.37;ReadPosRankSum=1.392;VQSLOD=3.7051;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:12,17:29:27.09:1098,27,0	1/1:2,1:3:3.01:133,3,0	0/0:16,0:14:24.55:0,25,1022	0/0:13,0:10:9.03:0,9,384	1/1:9,9:17:21.07:792,21,0	0/0:32,0:32:87.30:0,87,5794	0/0:16,0:16:42.14:0,42,3108	1/1:20,0:19:6:52,6,0	1/1:7,10:17:18.06:797,18,0	1/1:11,7:18:24.06:953,24,0	1/1:10,5:15:15.05:511,15,0	0/0:20,0:20:42.14:0,42,2960	0/0:11,0:11:27.09:0,27,1991	0/0:24,0:24:57.20:0,57,3950	1/1:9,15:24:36.12:1593,36,0	0/1:13,1:27:74.64:75,0,3394	1/1:5,7:12:15.05:664,15,0	0/0:31,0:30:66.18:0,66,4531	1/1:11,10:19:27.05:993,27,0	1/1:6,8:14:18.06:797,18,0	1/1:7,3:10:3.01:133,3,0	0/0:28,0:28:63.21:0,63,3971	0/0:20,0:20:51.16:0,51,3538	0/0:17,0:17:42.14:0,42,3146	1/1:5,5:10:12.04:451,12,0	1/1:17,15:32:45.13:1672,45,0	1/1:9,17:26:48.64:2125,49,0	./.
chr10	57376495	.	TACACACACACACACACACAC	T	2435.10	PASS	AB=0.904;AC=23;AF=0.479;AN=48;BaseQRankSum=2.914;DP=391;FS=12.605;HRun=0;HaplotypeScore=176.6191;InbreedingCoeff=0.5220;MQ=59.74;MQ0=19;MQRankSum=-2.038;QD=16.02;ReadPosRankSum=0.917;VQSLOD=2.1328;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:33:36.12:0,36,1667	1/1:2,0:3:3.01:153,3,0	./.	0/0:28,0:20:9.01:0,9,110	0/0:15,0:15:21.07:0,21,921	0/0:12,0:12:18.06:0,18,1392	0/0:18,0:18:21.07:0,21,1268	1/1:15,0:20:12.48:132,12,0	1/1:10,3:11:3.01:150,3,0	0/1:6,1:7:57.52:207,0,58	1/1:8,0:7:6.02:98,6,0	0/0:5,0:5:6.02:0,6,470	0/0:8,0:6:3.48:0,3,237	0/0:8,0:8:3.01:0,3,245	./.	./.	0/1:14,0:11:99:128,0,108	1/1:8,0:8:3.01:144,3,0	0/1:8,0:9:1.90:174,0,2	1/1:11,5:16:2.96:19,3,0	1/1:20,2:20:11.99:138,12,0	0/0:15,0:14:15.05:0,15,822	0/0:15,0:15:18.03:0,18,955	0/0:33,0:29:36.11:0,36,2120	./.	1/1:9,3:12:15.05:690,15,0	1/1:7,1:9:12.04:411,12,0	1/1:7,2:8:3.01:158,3,0
chr10	57376579	.	GAGAGAGAGAGAGAGAGAT	G	2938.48	PASS	AB=0.891;AC=17;AF=0.315;AN=54;BaseQRankSum=5.564;DP=595;FS=1.904;HRun=0;HaplotypeScore=161.4237;InbreedingCoeff=0.5011;MQ=57.78;MQ0=56;MQRankSum=1.771;QD=15.23;ReadPosRankSum=-0.059;VQSLOD=2.3848;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:43:6.02:0,6,105	0/1:8,0:7:34.84:35,0,331	0/0:45,0:16:13.01:0,13,151	0/0:54,0:19:7.44:0,7,218	0/0:11,0:11:3.01:0,3,76	0/0:12,0:12:19.27:0,19,602	0/0:18,0:16:32.50:0,32,846	0/1:24,0:23:99:148,0,458	0/0:23,0:22:3.31:0,3,9	1/1:5,14:18:19.97:348,20,0	1/1:5,9:13:0.47:1,0,0	0/0:16,0:15:25.75:0,26,795	0/0:15,0:13:22.85:0,23,897	0/0:15,0:15:27.51:0,28,823	0/0:13,0:13:0:0,0,0	0/0:22,0:20:39.52:0,40,1129	0/1:21,1:15:46.31:46,0,917	0/0:17,0:16:47.97:0,48,1513	1/1:3,14:16:44.66:882,45,0	0/1:0,15:15:0:1,0,0	./.	0/0:18,0:17:8.96:0,9,70	0/0:11,0:10:5.99:0,6,50	0/0:29,0:24:50.53:0,51,2044	0/1:22,0:21:0:0,0,0	1/1:10,11:17:28.89:1090,29,0	1/1:3,14:17:9.03:437,9,0	1/1:5,9:10:5.98:113,6,0
chr10	57376587	.	GAGAGAGAGAT	G	2235	PASS	AB=0.933;AC=22;AF=0.407;AN=54;BaseQRankSum=4.668;DP=589;FS=1.118;HRun=0;HaplotypeScore=123.7011;InbreedingCoeff=0.6307;MQ=67.50;MQ0=51;MQRankSum=0.701;QD=9.43;ReadPosRankSum=-0.657;VQSLOD=2.4482;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/1:7,0:6:36.06:36,0,75	0/0:56,0:25:26.54:0,27,302	0/0:63,0:26:23.67:0,24,270	0/1:12,0:12:0:0,0,0	0/0:10,0:10:15.45:0,15,243	0/0:16,0:14:33:0,33,586	1/1:23,0:22:22.92:407,23,0	1/1:22,0:21:2.69:64,3,0	1/1:17,0:16:18.85:274,19,0	0/1:11,0:11:0.14:0,0,0	0/0:16,0:15:30.89:0,31,543	0/0:16,0:14:25.28:0,25,418	0/0:15,0:15:30:0,30,371	0/0:4,9:13:0:0,0,0	0/0:23,0:21:39.43:0,39,610	0/1:20,0:13:72:72,0,368	0/0:18,0:17:44.94:0,45,560	1/1:16,0:15:44.70:593,45,0	0/1:15,0:15:0:0,0,0	1/1:34,0:31:2.96:19,3,0	0/0:18,0:17:14.95:0,15,120	0/0:14,0:13:17.98:0,18,149	0/0:29,0:25:50.52:0,51,1196	0/1:7,14:20:0:0,0,0	1/1:13,0:12:36.04:641,36,0	1/1:14,0:14:9.03:259,9,0	1/1:12,0:9:5.96:43,6,0
chr10	57376589	.	GAGAGAGAT	G	2133.04	PASS	AB=0.909;AC=21;AF=0.389;AN=54;BaseQRankSum=4.792;DP=569;FS=1.100;HRun=0;HaplotypeScore=110.3239;InbreedingCoeff=0.6345;MQ=71.14;MQ0=48;MQRankSum=-0.384;QD=10.30;ReadPosRankSum=-0.120;VQSLOD=2.2057;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/1:6,0:5:29.46:56,0,29	0/0:57,0:26:30.04:0,30,330	0/0:66,0:28:29.39:0,29,320	0/1:2,10:12:0:0,0,0	0/0:10,0:10:17.98:0,18,240	0/0:15,0:13:33:0,33,517	1/1:23,0:22:49.89:463,50,0	1/1:2,14:15:3.01:83,3,0	1/1:17,0:16:19.59:261,20,0	0/1:11,0:11:0:0,0,0	0/0:16,0:15:33:0,33,499	0/0:15,0:14:24.78:0,25,297	0/0:15,0:15:29.95:0,30,310	0/0:11,1:12:0:0,0,0	0/0:25,0:23:45.40:0,45,561	0/1:18,0:13:82.78:83,0,239	0/0:16,0:15:43.08:0,43,389	1/1:16,0:15:44.70:536,45,0	0/1:15,0:15:0:0,0,0	1/1:34,0:31:2.96:19,3,0	0/0:17,0:16:14.95:0,15,120	0/0:12,0:12:17.98:0,18,149	0/0:29,0:25:50.24:0,50,1010	0/0:18,0:17:0:0,0,0	1/1:13,0:12:36.04:554,36,0	1/1:14,0:14:9.03:211,9,0	1/1:12,0:9:5.93:40,6,0
chr10	57376591	.	GAGAGAT	G	2139.58	PASS	AB=1.000;AC=21;AF=0.389;AN=54;BaseQRankSum=4.264;DP=566;FS=0.000;HRun=0;HaplotypeScore=101.9266;InbreedingCoeff=0.6284;MQ=72.59;MQ0=45;MQRankSum=-1.069;QD=10.19;ReadPosRankSum=0.521;VQSLOD=1.9907;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/1:6,0:5:7.95:102,0,8	0/0:58,0:27:28.50:0,29,329	0/0:66,0:28:28.88:0,29,319	0/1:12,0:12:0:0,0,0	0/0:10,0:10:17.98:0,18,216	0/0:16,0:14:36:0,36,473	1/1:28,0:27:69.95:624,70,0	1/1:16,0:15:3.01:65,3,0	1/1:17,0:16:20.35:248,20,0	0/1:11,0:11:0:0,0,0	0/0:17,0:16:36:0,36,456	0/0:15,0:14:5.18:0,5,183	0/0:15,0:15:30.86:0,31,275	0/0:11,0:11:0:0,0,0	0/0:25,0:23:50.92:0,51,537	0/1:17,0:13:98.80:99,0,137	0/0:16,0:15:17:0,17,237	1/1:16,0:15:44.70:480,45,0	0/1:15,0:15:0:0,0,0	1/1:34,0:31:2.96:19,3,0	0/0:16,0:15:17.95:0,18,144	0/0:12,0:12:17.98:0,18,149	0/0:28,0:25:50.12:0,50,828	0/0:16,0:15:0:0,0,0	1/1:13,0:12:36.04:470,36,0	1/1:14,0:14:9.03:166,9,0	1/1:11,0:9:5.93:40,6,0
chr10	57376919	.	C	CTG	2591.45	PASS	AB=0.907;AC=34;AF=0.630;AN=54;BaseQRankSum=7.784;DP=744;FS=9.971;HRun=0;HaplotypeScore=163.5138;InbreedingCoeff=0.5725;MQ=58.48;MQ0=25;MQRankSum=0.145;QD=4.85;ReadPosRankSum=-0.123;VQSLOD=2.5910;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:53,0:53:32.63:352,33,0	1/1:6,0:6:2.98:21,3,0	./.	0/1:60,0:17:0:0,0,0	1/1:17,0:17:17.79:133,18,0	0/0:18,0:20:18.33:0,18,170	0/0:31,0:31:31.08:0,31,300	1/1:27,0:26:9.44:82,9,0	1/1:23,0:23:14.99:135,15,0	1/1:22,0:22:14.97:132,15,0	1/1:16,0:15:5.98:48,6,0	0/0:26,0:26:32.92:0,33,342	0/0:11,0:11:12.03:0,12,131	0/0:20,0:20:27.06:0,27,288	1/1:24,0:24:23.92:192,24,0	0/1:17,10:28:90.07:239,0,90	1/1:20,0:20:11.99:111,12,0	0/1:23,12:36:99:340,0,131	1/1:21,0:21:11.96:101,12,0	0/1:17,0:17:0:0,0,1	0/1:50,0:48:0.61:165,0,1	0/0:18,0:19:11.86:0,12,112	0/1:13,0:14:29.74:30,0,68	0/0:33,0:34:50.91:0,51,529	1/1:20,0:19:6:51,6,0	1/1:34,0:33:32.92:291,33,0	1/1:24,0:24:26.66:219,27,0	1/1:21,0:20:14.97:133,15,0
chr10	57376921	.	G	GTC	6959.38	PASS	AB=0.862;AC=33;AF=0.589;AN=56;BaseQRankSum=9.265;DP=765;FS=1.081;HRun=0;HaplotypeScore=142.9062;InbreedingCoeff=0.7377;MQ=57.86;MQ0=30;MQRankSum=-5.274;QD=14.84;ReadPosRankSum=2.447;VQSLOD=5.0142;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:12,41:53:15.79:662,16,0	1/1:7,0:7:11.97:114,12,0	0/0:53,0:19:39.97:0,40,421	0/0:64,0:17:31.14:0,31,332	0/1:5,12:17:5.27:197,0,5	0/0:22,0:21:41.99:0,42,442	0/0:29,0:29:70.01:0,70,733	1/1:31,0:30:54.50:674,54,0	1/1:19,3:22:27.43:405,27,0	1/1:20,4:24:8.95:488,9,0	1/1:2,13:15:6.02:89,6,0	0/0:28,0:28:68.95:0,69,764	0/0:11,0:11:33:0,33,352	0/0:21,0:21:59.87:0,60,649	1/1:17,8:25:33.12:551,33,0	0/1:29,0:28:64.39:64,0,342	1/1:5,17:21:13.84:110,14,0	0/1:37,0:37:82.82:83,0,539	1/1:20,1:21:55.48:515,55,0	1/1:16,2:18:17.11:148,17,0	1/1:43,6:47:38.51:631,39,0	0/0:18,0:18:38.18:0,38,360	0/0:16,0:16:3.31:0,3,170	0/0:34,0:34:84.04:0,84,1012	1/1:17,2:18:35.88:316,36,0	1/1:30,5:33:61.08:880,61,0	1/1:15,8:23:57.46:593,57,0	1/1:16,5:20:47.84:440,48,0
chr10	57376929	.	G	GTC	1250.10	PASS	AB=0.859;AC=15;AF=0.268;AN=56;BaseQRankSum=4.211;DP=778;FS=7.789;HRun=0;HaplotypeScore=149.6688;InbreedingCoeff=-0.2176;MQ=52.21;MQ0=36;MQRankSum=-3.142;QD=3.19;ReadPosRankSum=4.650;VQSLOD=1.3867;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:53,0:52:3.64:4,0,58	0/0:7,0:7:9.85:0,10,70	0/0:61,0:16:41.83:0,42,355	0/0:76,0:17:38.41:0,38,331	0/0:16,0:16:8.58:0,9,34	0/0:24,0:23:47.99:0,48,493	0/0:30,0:30:70.95:0,71,747	0/0:29,0:28:44.99:0,45,503	0/1:13,7:23:99:136,0,155	0/1:15,4:21:99:175,0,148	1/1:12,0:12:4.32:31,4,0	0/0:28,0:28:71.78:0,72,790	0/0:9,0:8:21.02:0,21,255	0/0:19,0:19:57.04:0,57,645	0/1:17,7:29:99:146,0,154	0/1:23,0:22:71.40:71,0,278	0/1:18,0:17:10.71:11,0,46	0/1:37,0:37:74.41:74,0,576	0/1:19,0:19:41.37:41,0,261	0/0:8,7:17:17.96:0,18,143	0/1:49,2:51:68.48:68,0,348	0/0:17,0:17:32.97:0,33,328	0/0:17,0:17:18.24:0,18,284	0/0:36,0:36:88.25:0,88,1055	0/1:13,6:20:50.65:51,0,169	0/1:26,7:33:99:291,0,263	0/1:18,0:25:99:200,0,169	0/1:15,4:21:99:106,0,147
chr10	57376931	.	G	GTC	1873.11	PASS	AB=0.960;AC=18;AF=0.321;AN=56;BaseQRankSum=8.732;DP=785;FS=10.415;HRun=0;HaplotypeScore=147.1227;InbreedingCoeff=-0.1243;MQ=50.89;MQ0=38;MQRankSum=-1.876;QD=4.48;ReadPosRankSum=9.839;VQSLOD=0.6050;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:42,12:53:19.95:610,20,0	0/1:7,0:7:0.90:1,0,23	0/0:63,0:15:28.99:0,29,279	0/0:77,0:16:32.72:0,33,272	1/1:9,6:15:17.52:223,18,0	0/0:26,0:25:50.98:0,51,516	0/0:30,0:30:71.12:0,71,749	0/0:28,0:26:40.89:0,41,318	0/1:20,1:21:59.30:64,0,59	0/1:18,2:20:85.20:124,0,85	0/1:14,1:14:32.44:86,0,32	0/0:27,0:27:65.81:0,66,745	0/0:11,0:10:20.94:0,21,246	0/0:19,0:19:57.04:0,57,643	0/1:27,3:30:82.33:180,0,82	0/1:24,0:23:68.55:69,0,290	0/1:20,0:19:31.99:32,0,48	0/1:36,0:36:88.11:88,0,485	0/1:17,1:18:62.16:62,0,76	0/0:17,0:17:14.60:0,15,52	0/1:51,2:51:99:101,0,180	0/0:16,0:16:32.97:0,33,329	0/0:17,0:17:21.27:0,21,313	0/0:36,0:36:94.21:0,94,1099	0/1:22,0:21:8.83:9,0,60	0/1:33,2:33:88.16:163,0,88	0/1:25,1:26:96.36:129,0,96	0/1:20,2:21:85.68:101,0,86
chr10	57377178	.	CTG	C	2565.62	PASS	AC=30;AF=0.556;AN=54;BaseQRankSum=6.597;DP=406;FS=41.889;HRun=0;HaplotypeScore=62.0208;InbreedingCoeff=0.8642;MQ=71.08;MQ0=0;MQRankSum=-4.415;QD=15.46;ReadPosRankSum=-7.538;VQSLOD=0.5378;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:15,2:17:16.79:232,17,0	1/1:4,0:4:4.23:25,4,0	0/0:17,0:16:46.01:0,46,598	0/0:21,0:17:25.08:0,25,492	1/1:3,2:5:3:29,3,0	0/0:21,0:21:63.22:0,63,1101	0/0:24,0:24:69.24:0,69,1205	1/1:12,0:10:12.03:155,12,0	1/1:3,0:10:8.69:79,9,0	1/1:6,1:12:15.10:163,15,0	./.	0/0:13,0:13:39.13:0,39,683	0/0:15,0:15:42.12:0,42,711	0/0:15,0:15:45.14:0,45,760	1/1:13,0:15:37.28:408,37,0	0/0:15,0:15:45.14:0,45,759	1/1:19,0:19:42.05:270,42,0	0/0:30,0:30:90.20:0,90,1481	1/1:2,18:19:38.82:508,39,0	1/1:2,1:4:3.01:46,3,0	1/1:10,2:14:24.08:369,24,0	0/0:22,0:22:63.20:0,63,1059	0/0:20,0:19:48.14:0,48,796	0/0:25,0:25:75.26:0,75,1304	1/1:2,0:2:3.01:46,3,0	1/1:2,10:13:20.96:267,21,0	1/1:0,0:14:9.02:91,9,0	1/1:2,1:4:6.02:88,6,0
chr10	57378182	.	TCCCCAGC	T	6582.72	PASS	AB=0.980;AC=52;AF=0.963;AN=54;BaseQRankSum=0.629;DP=168;FS=21.503;HRun=0;HaplotypeScore=105.5870;InbreedingCoeff=-0.1153;MQ=85.70;MQ0=6;MQRankSum=-4.402;QD=39.18;ReadPosRankSum=3.907;VQSLOD=2.9806;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,7:7:18.06:448,18,0	1/1:0,6:6:18.06:448,18,0	0/1:23,0:15:66.89:67,0,115	0/1:23,0:9:50.47:50,0,148	1/1:1,3:4:9.03:224,9,0	1/1:0,6:6:15.05:373,15,0	1/1:0,6:6:9.03:224,9,0	1/1:0,1:1:3.01:75,3,0	1/1:0,2:2:6.02:149,6,0	1/1:0,4:4:12.04:299,12,0	1/1:2,2:4:6.02:149,6,0	1/1:1,5:6:12.04:298,12,0	1/1:2,1:3:3.01:75,3,0	1/1:1,1:2:3.01:74,3,0	1/1:0,4:4:12.04:298,12,0	1/1:3,2:5:9.03:224,9,0	1/1:2,9:11:27.09:671,27,0	./.	1/1:3,1:3:3.01:75,3,0	1/1:2,4:6:9.03:224,9,0	1/1:0,1:1:3.01:75,3,0	1/1:2,2:4:3.01:75,3,0	1/1:1,6:7:18.06:422,18,0	1/1:4,5:9:12.04:298,12,0	1/1:1,7:8:21.07:522,21,0	1/1:1,2:3:6.02:149,6,0	1/1:0,6:6:18.06:448,18,0	1/1:0,2:2:6.02:149,6,0
chr10	57378224	.	GGA	G	672.23	PASS	AB=0.692;AC=16;AF=0.286;AN=56;BaseQRankSum=9.937;DP=341;FS=44.004;HRun=0;HaplotypeScore=126.8296;InbreedingCoeff=-0.2572;MQ=75.23;MQ0=5;MQRankSum=-5.989;QD=4.77;ReadPosRankSum=5.357;VQSLOD=1.2450;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:6,6:12:48.46:48,0,65	1/1:1,5:6:0.33:80,0,0	0/0:46,0:23:28.49:0,28,639	0/0:45,0:23:29.30:0,29,351	0/1:4,6:10:40.32:40,0,56	0/0:11,0:11:29.98:0,30,439	0/0:10,0:10:20.99:0,21,318	0/0:14,1:15:12.50:0,13,171	0/1:6,2:8:33.50:34,0,61	0/1:9,8:17:48.50:114,0,49	0/1:4,2:6:24.55:25,0,40	0/0:10,0:10:27.05:0,27,498	0/0:7,0:7:21.07:0,21,417	0/0:6,0:6:17.09:0,17,279	0/1:6,5:11:40.20:56,0,40	0/0:11,0:11:33.10:0,33,478	0/1:10,7:17:68.36:107,0,68	0/0:4,0:4:12.04:0,12,241	0/1:10,2:11:17.13:17,0,65	0/1:3,4:7:20.01:20,0,40	0/1:1,1:2:5.98:14,0,6	0/0:5,0:5:14.92:0,15,256	0/0:15,0:15:43.96:0,44,814	0/0:15,0:14:44.99:0,45,753	0/1:3,9:12:26.94:120,0,27	0/1:5,3:8:31.49:41,0,31	0/1:2,8:10:21.67:101,0,22	0/1:2,1:3:11.63:12,0,12
chr10	57378316	.	AT	A	9443.04	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=9.514;DP=510;FS=2.091;HRun=4;HaplotypeScore=55.9054;InbreedingCoeff=0.9932;MQ=82.83;MQ0=0;MQRankSum=-3.489;QD=33.25;ReadPosRankSum=2.555;VQSLOD=5.5145;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,33:34:96.29:1151,96,0	1/1:1,6:7:18.05:214,18,0	0/0:16,0:16:42.14:0,42,582	0/0:18,0:18:53.99:0,54,684	1/1:1,16:17:42.13:504,42,0	0/0:17,0:17:48.13:0,48,651	0/0:26,0:26:75.25:0,75,1049	1/1:1,14:15:42.09:488,42,0	1/1:0,15:15:45.14:540,45,0	1/1:0,17:17:51.16:611,51,0	1/1:0,5:5:15.05:180,15,0	0/0:19,0:19:57.19:0,57,796	0/0:19,0:19:57.19:0,57,793	0/0:11,0:11:33.11:0,33,461	1/1:2,24:26:66.20:792,66,0	0/0:30,0:30:87.26:0,87,1184	1/1:0,44:44:99:1511,126,0	0/0:19,0:19:54.16:0,54,737	1/1:1,18:19:54.14:625,54,0	1/1:1,8:9:24.07:288,24,0	1/1:0,31:31:87.27:1043,87,0	0/0:8,0:8:24.08:0,24,336	0/0:11,0:11:33.11:0,33,461	0/0:32,0:32:84.28:0,84,1176	1/1:1,8:9:21.06:252,21,0	1/1:0,16:16:48.15:576,48,0	1/1:0,14:14:42.13:503,42,0	1/1:0,6:6:15:164,15,0
chr10	57379149	.	A	AC	5350.36	PASS	AB=1.000;AC=33;AF=0.589;AN=56;BaseQRankSum=10.711;DP=393;FS=13.545;HRun=6;HaplotypeScore=67.2259;InbreedingCoeff=0.8835;MQ=82.62;MQ0=0;MQRankSum=-2.030;QD=22.48;ReadPosRankSum=2.166;VQSLOD=3.3688;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:14,13:27:49.09:594,49,0	1/1:0,2:2:6.02:75,6,0	0/0:16,0:17:11.10:0,11,249	0/1:8,0:8:15.05:15,0,116	1/1:3,10:13:12.04:144,12,0	0/0:14,0:14:30.06:0,30,306	0/0:24,0:24:63.14:0,63,641	1/1:8,12:20:30.10:377,30,0	1/1:2,12:14:21.07:260,21,0	1/1:3,4:7:12.04:151,12,0	1/1:1,6:7:15.05:189,15,0	0/0:12,0:12:20.59:0,21,203	0/0:8,0:8:21.04:0,21,214	0/0:8,0:8:11.74:0,12,107	1/1:2,22:24:51.16:642,51,0	0/0:13,0:13:36.08:0,36,367	1/1:1,10:11:24.08:302,24,0	0/0:12,0:12:30.04:0,30,297	1/1:4,14:18:39.12:479,39,0	1/1:3,10:13:21.07:262,21,0	1/1:6,21:27:48.14:592,48,0	0/0:15,0:15:42.07:0,42,416	0/0:11,0:11:27.04:0,27,267	0/0:21,0:21:60.12:0,60,605	1/1:6,7:13:27.07:325,27,0	1/1:4,7:11:12.04:151,12,0	1/1:0,18:18:48.15:604,48,0	1/1:0,5:5:15.05:189,15,0
chr10	57379718	.	CGCCATTT	C	9678.51	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=11.423;DP=443;FS=2.703;HRun=0;HaplotypeScore=108.3629;InbreedingCoeff=0.9514;MQ=80.53;MQ0=0;MQRankSum=-11.581;QD=38.56;ReadPosRankSum=2.793;VQSLOD=4.4911;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,17:23:27.09:673,27,0	1/1:0,4:4:6.02:150,6,0	0/0:19,0:18:42.60:0,43,1115	0/0:16,0:18:30.90:0,31,690	1/1:3,10:13:18.06:431,18,0	0/0:15,0:15:39.09:0,39,1289	0/0:16,0:16:42.11:0,42,1323	1/1:7,15:22:42.12:883,42,0	1/1:5,12:17:24.08:597,24,0	1/1:3,14:17:40.38:1043,40,0	1/1:3,10:13:15.01:319,15,0	0/0:23,0:23:57.19:0,57,1934	0/0:10,0:10:30.08:0,30,973	0/0:13,0:13:39.13:0,39,1450	1/1:2,15:17:36.12:896,36,0	0/0:18,0:18:45.14:0,45,1479	1/1:4,18:22:27.09:636,27,0	0/0:24,0:24:60.20:0,60,2100	1/1:5,11:16:30.10:704,30,0	1/1:2,13:15:30.10:749,30,0	1/1:7,6:13:2.75:65,3,0	0/0:12,0:12:33.11:0,33,1174	0/0:8,0:8:24.08:0,24,862	0/0:16,0:16:39.13:0,39,1375	1/1:5,15:20:33.11:822,33,0	1/1:3,16:19:42.12:965,42,0	1/1:1,10:11:15.05:373,15,0	1/1:2,7:9:15.05:374,15,0
chr10	57381765	.	A	AG	774.68	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=4.134;DP=884;FS=2.514;HRun=4;HaplotypeScore=134.8724;InbreedingCoeff=0.9993;MQ=70.16;MQ0=2;MQRankSum=-4.893;QD=16.48;ReadPosRankSum=-2.904;VQSLOD=2.0078;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:5,21:25:41.80:405,42,0	0/0:12,0:12:27.06:0,27,296	0/0:36,0:31:50.05:0,50,845	0/0:39,0:34:60.09:0,60,786	1/1:4,17:21:35.95:491,36,0	0/0:28,0:28:78.21:0,78,874	0/0:24,0:24:69.18:0,69,772	0/0:36,0:36:81.22:0,81,919	0/0:33,0:33:81.19:0,81,903	0/0:58,0:58:99:0,153,1728	0/0:24,0:24:42.12:0,42,476	0/0:30,0:30:84.22:0,84,943	0/0:29,0:29:81.19:0,81,904	0/0:42,0:42:99:0,120,1347	0/0:46,0:46:72.19:0,72,812	0/0:39,0:38:99:0,102,1152	0/0:25,0:25:66.19:0,66,748	0/0:24,0:24:69.20:0,69,783	0/0:25,0:25:66.17:0,66,738	0/0:22,0:22:54.14:0,54,612	0/0:35,0:34:65.90:0,66,748	0/0:47,0:47:99:0,135,1531	0/0:35,0:35:99:0,99,1113	0/0:40,0:40:99:0,105,1191	0/0:22,0:22:54.15:0,54,612	0/0:41,0:39:99:0,105,1177	0/0:26,0:26:66.19:0,66,747	0/0:18,0:18:36.10:0,36,407
chr10	57381780	.	C	CGT	423.12	PASS	AB=0.676;AC=3;AF=0.054;AN=56;BaseQRankSum=4.191;DP=883;FS=5.867;HRun=0;HaplotypeScore=168.4614;InbreedingCoeff=0.6367;MQ=58.87;MQ0=8;MQRankSum=-4.134;QD=9.40;ReadPosRankSum=0.578;VQSLOD=3.2026;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:13,12:24:22.41:182,0,22	0/0:7,0:7:15.05:0,15,188	0/0:48,0:23:38.67:0,39,494	0/0:37,0:26:38.48:0,38,453	1/1:7,13:19:21.07:345,21,0	0/0:26,0:26:66.21:0,66,825	0/0:33,0:31:70.07:0,70,831	0/0:45,0:44:70.34:0,70,1041	0/0:34,0:33:57.18:0,57,707	0/0:57,0:58:99:0,144,1808	0/0:18,0:18:27.07:0,27,321	0/0:43,0:42:87.19:0,87,1042	0/0:25,0:26:72.06:0,72,876	0/0:44,0:44:99:0,123,1513	0/0:38,0:36:60.19:0,60,750	0/0:37,0:37:78.08:0,78,951	0/0:22,0:22:45.14:0,45,562	0/0:28,0:27:65.64:0,66,764	0/0:23,0:21:30.06:0,30,356	0/0:18,0:18:33.10:0,33,432	0/0:34,0:33:32.91:0,33,389	0/0:41,0:43:99:0,114,1401	0/0:35,0:35:93.28:0,93,1141	0/0:37,0:40:99:0,102,1188	0/0:21,0:21:39.12:0,39,487	0/0:40,0:40:98.88:0,99,1157	0/0:23,0:24:66.04:0,66,800	0/0:11,0:12:20.90:0,21,239
chr10	57381807	.	TTGTG	T	5358.08	PASS	AB=0.612;AC=31;AF=0.574;AN=54;BaseQRankSum=6.480;DP=740;FS=7.511;HRun=0;HaplotypeScore=165.9851;InbreedingCoeff=0.7237;MQ=45.67;MQ0=15;MQRankSum=-10.309;QD=15.44;ReadPosRankSum=-2.538;VQSLOD=3.6716;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:8,6:13:5.72:37,6,0	1/1:1,0:5:6:54,6,0	0/0:47,0:10:12.04:0,12,232	./.	0/1:4,10:13:0.90:48,0,1	0/0:20,0:20:51.18:0,51,1250	0/0:32,0:29:64.56:0,65,1415	0/1:20,0:39:94.72:260,0,95	1/1:10,10:19:29.84:298,30,0	1/1:30,23:53:91.68:1534,92,0	1/1:2,5:7:2.97:20,3,0	0/0:44,0:44:99:0,105,2259	0/0:32,0:31:84.24:0,84,1894	0/0:42,0:42:99:0,102,2477	1/1:15,13:26:39.23:469,39,0	0/1:10,1:30:10.36:10,0,218	1/1:9,0:15:17.89:153,18,0	0/0:9,0:18:10.57:0,11,135	1/1:5,4:7:11.55:179,12,0	1/1:7,4:11:18.03:277,18,0	1/1:19,7:22:9.51:136,10,0	0/0:41,0:41:99:0,102,2470	0/0:35,0:36:75.02:0,75,1654	0/0:43,0:43:99:0,99,2273	1/1:7,9:16:23.95:317,24,0	1/1:13,19:32:66.13:1075,66,0	1/1:11,8:19:24.17:334,24,0	1/1:2,3:5:9.03:155,9,0
chr10	57381835	.	GCA	G	605.76	PASS	AB=0.969;AC=15;AF=0.278;AN=54;BaseQRankSum=9.932;DP=582;FS=11.637;HRun=0;HaplotypeScore=159.4087;InbreedingCoeff=-0.2508;MQ=46.28;MQ0=20;MQRankSum=-9.077;QD=3.22;ReadPosRankSum=-5.069;VQSLOD=0.0071;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:10,1:9:3.89:33,4,0	0/1:7,0:7:46.46:49,0,46	0/0:44,0:7:18.06:0,18,329	0/0:44,1:6:12.01:0,12,203	0/1:13,0:12:30.88:31,0,32	0/0:17,0:17:51.17:0,51,962	0/0:33,2:31:76.67:0,77,1502	0/0:14,0:14:39.13:0,39,726	0/1:14,0:12:51.18:51,0,124	0/1:24,0:24:99:102,0,380	./.	0/0:46,0:46:99:0,132,2586	0/0:33,0:32:96.33:0,96,1866	0/0:43,0:43:99:0,126,2397	0/1:15,0:14:14.23:14,0,232	0/1:19,11:30:99:255,0,762	0/1:10,0:10:18.84:19,0,93	0/1:11,2:12:60.10:60,0,244	0/1:8,0:5:20.74:21,0,65	0/1:5,0:5:19.04:19,0,106	0/1:11,0:10:61.80:62,0,98	0/0:31,0:31:90.31:0,90,1729	0/0:27,0:27:76.17:0,76,1437	0/0:41,0:41:99:0,108,2096	0/0:9,0:9:14.93:0,15,207	0/1:18,0:18:25.02:25,0,329	0/1:8,0:8:20.55:21,0,134	0/0:3,0:3:5.96:0,6,85
chr10	57381837	.	ATG	A	633.41	PASS	AB=0.808;AC=14;AF=0.259;AN=54;BaseQRankSum=7.695;DP=611;FS=16.554;HRun=0;HaplotypeScore=181.7434;InbreedingCoeff=0.2728;MQ=45.50;MQ0=22;MQRankSum=-7.120;QD=4.40;ReadPosRankSum=1.751;VQSLOD=1.4744;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:12:4.83:0,5,38	0/0:6,0:6:11.60:0,12,79	0/0:48,0:9:8.72:0,9,142	0/0:42,1:5:12.04:0,12,202	0/0:18,0:17:21.28:0,21,231	0/0:17,0:17:36.11:0,36,585	0/0:35,0:31:69.23:0,69,1151	0/0:15,0:15:27.06:0,27,416	1/1:12,6:16:0.88:2,1,0	0/1:15,9:24:34.88:355,0,35	./.	0/0:46,0:46:99:0,132,2242	0/0:33,0:32:87.30:0,87,1456	0/0:41,0:41:99:0,105,1746	1/1:10,5:14:0.47:1,0,0	0/0:28,0:28:44.51:0,45,707	0/0:10,0:10:11.95:0,12,112	0/0:12,0:11:18.08:0,18,230	0/1:9,2:8:60.63:61,0,134	0/1:4,2:6:0:0,0,0	0/0:18,2:18:0.72:0,1,1	0/0:31,0:31:72.25:0,72,1211	0/1:26,2:28:2.79:3,0,1061	0/0:43,0:43:99:0,105,1732	1/1:4,6:10:5.93:40,6,0	0/1:13,6:19:48.93:212,0,49	0/1:8,2:10:29.28:50,0,29	1/1:1,2:3:3.01:38,3,0
chr10	57381851	.	A	ATG	902.94	PASS	AB=0.791;AC=9;AF=0.161;AN=56;BaseQRankSum=5.410;DP=591;FS=8.977;HRun=0;HaplotypeScore=198.5989;InbreedingCoeff=0.0711;MQ=48.67;MQ0=12;MQRankSum=-4.964;QD=9.21;ReadPosRankSum=0.670;VQSLOD=2.6687;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,1:17:28.20:0,28,368	0/0:6,0:6:12.04:0,12,172	0/0:40,0:10:13.52:0,14,200	0/0:45,1:7:14.88:0,15,215	0/0:17,5:21:25.30:0,25,345	0/0:16,0:16:48.16:0,48,687	0/0:28,0:25:63.19:0,63,881	0/1:13,0:13:1:1,0,197	0/0:18,4:20:27.42:0,27,364	0/1:11,6:17:99:272,0,195	0/0:1,0:1:3.01:0,3,43	0/0:48,0:48:99:0,132,1861	0/0:34,0:34:99:0,102,1386	0/0:42,0:42:99:0,117,1628	0/0:18,2:18:23.67:0,24,311	0/1:21,8:29:99:258,0,212	0/0:15,0:15:39.13:0,39,552	0/1:11,2:13:56.95:140,0,57	0/0:9,0:8:12.50:0,13,173	0/0:5,2:7:4.26:0,4,45	0/0:15,1:16:18.58:0,19,222	0/0:28,0:28:78.25:0,78,1095	0/0:29,0:29:78.26:0,78,1117	0/0:41,0:41:99:0,105,1479	0/1:5,3:8:0.01:0,0,0	0/1:5,5:10:99:271,0,102	0/1:4,2:6:35.06:35,0,123	1/1:0,2:2:3.01:50,3,0
chr10	57381910	.	TGTGTGTGC	T	109.88	PASS	AB=0.987;AC=8;AF=0.143;AN=56;BaseQRankSum=5.808;DP=946;FS=16.595;HRun=0;HaplotypeScore=355.6210;InbreedingCoeff=0.0675;MQ=41.36;MQ0=44;MQRankSum=-5.766;QD=0.52;ReadPosRankSum=-3.736;VQSLOD=0.4224;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:32,2:28:40.72:53,0,41	0/0:12,0:11:11.99:0,12,191	0/0:25,0:4:2.17:0,2,46	0/0:53,0:9:14.16:0,14,154	0/0:30,0:30:14.28:0,14,294	0/0:28,0:28:75.21:0,75,2714	0/0:55,0:47:84.67:0,85,3044	0/1:35,0:32:32.71:33,0,483	0/0:39,3:39:14.54:0,15,599	0/0:59,1:54:99:0,108,3275	0/1:15,0:13:0.02:0,0,0	0/0:54,0:53:99:0,138,4478	0/0:44,0:44:99:0,129,4386	0/0:70,0:68:99:0,189,6364	0/0:45,3:43:5.89:0,6,111	0/0:40,0:40:90.14:0,90,3379	0/1:22,0:22:40.15:40,0,367	0/0:22,0:21:32.43:0,32,1547	0/0:17,0:11:32.67:0,33,331	1/1:20,1:21:0.85:3,1,0	0/1:42,0:25:21.73:27,0,22	0/0:27,0:25:75.23:0,75,2535	0/0:24,0:24:60.15:0,60,2046	0/0:48,0:48:99:0,121,4680	0/0:17,0:17:1.35:0,1,4	0/1:41,1:35:70.86:71,0,1734	0/0:17,0:17:25.93:0,26,534	0/0:2,0:2:5.97:0,6,104
chr10	57381967	.	ATG	A	139.43	PASS	AB=0.922;AC=14;AF=0.250;AN=56;BaseQRankSum=8.265;DP=763;FS=13.188;HRun=0;HaplotypeScore=243.2668;InbreedingCoeff=0.3022;MQ=46.89;MQ0=32;MQRankSum=-7.564;QD=0.66;ReadPosRankSum=-2.699;VQSLOD=0.9229;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:15:8.69:86,9,0	0/1:7,2:9:2.54:3,0,71	0/0:9,0:1:3.01:0,3,49	0/0:31,0:4:10.23:0,10,128	0/1:14,0:14:0:0,0,0	0/0:28,0:28:81.26:0,81,1392	0/0:31,0:29:66.23:0,66,1149	0/0:16,0:9:6.01:0,6,73	0/1:23,2:22:16.21:16,0,39	0/1:22,3:24:15.40:15,0,538	0/1:10,0:9:0:0,0,0	0/0:56,0:56:99:0,141,2459	0/0:51,0:51:99:0,141,2451	0/0:62,0:62:99:0,172,2987	0/0:30,3:32:2.85:0,3,16	0/0:54,0:54:99:0,141,2454	0/1:8,2:11:43.01:62,0,43	0/0:29,0:29:48.81:0,49,1209	0/0:9,0:5:8.94:0,9,70	0/1:16,1:17:0.02:0,0,0	1/1:24,3:17:13.07:75,13,0	0/0:39,0:39:99:0,114,1975	0/0:25,0:25:69.24:0,69,1209	0/0:60,0:60:99:0,156,2727	1/1:17,2:19:2.65:11,3,0	0/1:30,2:29:9.37:9,0,529	0/0:14,1:15:23.84:0,24,235	0/0:2,0:2:3.01:0,3,41
chr10	57381972	.	TGTGC	T	195.84	PASS	AB=0.982;AC=9;AF=0.161;AN=56;BaseQRankSum=8.144;DP=784;FS=27.052;HRun=0;HaplotypeScore=282.7916;InbreedingCoeff=0.4704;MQ=46.46;MQ0=28;MQRankSum=-7.554;QD=1.46;ReadPosRankSum=-3.430;VQSLOD=0.7538;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:18,2:17:12.74:120,13,0	0/0:10,0:10:17.56:0,18,136	0/0:12,0:1:3.01:0,3,84	0/0:30,0:5:14.92:0,15,230	0/1:17,0:17:0.04:0,0,0	0/0:28,0:28:84.26:0,84,2160	0/0:32,0:31:74.96:0,75,1892	0/0:13,0:7:4.81:0,5,30	0/1:31,0:28:25.93:26,0,39	0/0:25,0:24:36.42:0,36,790	0/1:8,0:8:0.03:0,0,0	0/0:57,0:56:99:0,156,4077	0/0:50,0:50:99:0,148,3912	0/0:62,0:62:99:0,181,4775	0/0:38,1:38:5.18:0,5,64	0/0:53,0:53:99:0,144,3800	0/1:9,1:10:67.42:67,0,87	0/0:30,0:30:43.43:0,43,2031	0/0:10,0:5:12.40:0,12,95	0/1:20,0:20:0.01:0,0,0	1/1:28,0:17:16.69:110,17,0	0/0:42,0:42:99:0,123,3167	0/0:26,0:25:72.23:0,72,1966	0/0:57,0:57:99:0,158,4234	0/0:25,0:25:2.12:0,2,8	0/0:32,0:29:35.32:0,35,817	0/0:15,0:15:23.62:0,24,268	0/0:2,0:2:6.02:0,6,87
chr10	57381974	.	TGC	T	284.77	PASS	AB=0.953;AC=15;AF=0.268;AN=56;BaseQRankSum=9.313;DP=755;FS=4.659;HRun=0;HaplotypeScore=258.3712;InbreedingCoeff=0.3957;MQ=47.15;MQ0=22;MQRankSum=-9.034;QD=1.41;ReadPosRankSum=-4.241;VQSLOD=1.8094;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:15,3:17:8.69:140,9,0	0/0:9,0:9:5.36:0,5,34	0/0:11,0:1:3.01:0,3,61	0/1:26,2:5:9.85:10,0,141	1/1:15,0:15:1.14:3,1,0	0/0:27,0:27:81.26:0,81,1589	0/0:33,0:32:77.95:0,78,1457	0/0:12,0:7:6.01:0,6,61	1/1:30,1:28:4.99:52,5,0	0/0:23,0:22:9.37:0,9,511	0/1:8,0:8:0.03:0,0,0	0/0:58,0:57:99:0,159,2955	0/0:51,0:51:99:0,150,2907	0/0:63,0:63:99:0,184,3560	0/0:37,0:36:2.14:0,2,19	0/0:53,0:53:99:0,144,2812	0/1:8,2:10:28.02:86,0,28	0/0:30,0:30:5.42:0,5,1390	0/0:6,0:1:2.97:0,3,20	0/1:16,0:16:0.02:0,0,0	1/1:19,6:17:15.24:110,15,0	0/0:42,0:42:99:0,123,2300	0/0:26,0:25:72.22:0,72,1388	0/0:56,0:56:99:0,158,3134	1/1:22,0:22:1.55:4,2,0	0/1:29,0:27:20.06:20,0,498	0/0:14,0:14:14.54:0,15,158	0/0:2,0:2:5.98:0,6,62
chr10	57381975	.	GCA	G	342.07	PASS	AB=0.952;AC=15;AF=0.268;AN=56;BaseQRankSum=9.575;DP=750;FS=11.558;HRun=0;HaplotypeScore=255.1543;InbreedingCoeff=0.3570;MQ=47.27;MQ0=22;MQRankSum=-9.405;QD=1.50;ReadPosRankSum=-3.514;VQSLOD=0.7369;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:12,5:16:8.68:100,9,0	0/0:9,0:9:1.61:0,2,5	0/0:10,1:1:3.01:0,3,61	0/1:26,1:5:32.79:33,0,159	0/1:13,1:14:0.11:0,0,0	0/0:27,0:27:81.26:0,81,1554	0/0:33,0:32:78:0,78,1505	0/0:11,0:6:3:0,3,26	1/1:28,3:28:4.67:41,5,0	0/1:21,1:21:18.04:18,0,612	0/1:8,0:8:0.03:0,0,0	0/0:59,0:58:99:0,160,3087	0/0:52,0:52:99:0,154,2950	0/0:64,0:64:99:0,187,3595	0/0:34,1:35:0.42:0,0,2	0/0:52,0:52:99:0,141,2767	1/1:10,0:10:10.48:97,10,0	0/1:30,1:31:6.73:7,0,1414	0/0:7,0:1:2.68:0,3,11	0/1:15,1:16:0.02:0,0,0	1/1:23,1:17:15.37:116,15,0	0/0:42,0:42:99:0,119,2281	0/0:26,0:25:72.24:0,72,1406	0/0:55,0:55:99:0,155,3119	0/0:22,0:22:1.19:0,1,4	0/1:22,3:26:76.58:77,0,491	0/0:12,0:14:2.86:0,3,155	0/0:2,0:2:5.89:0,6,69
chr10	57381979	.	GTGTGTGCA	G	2000.02	PASS	AB=0.938;AC=26;AF=0.464;AN=56;BaseQRankSum=10.574;DP=773;FS=11.520;HRun=0;HaplotypeScore=328.8484;InbreedingCoeff=0.4628;MQ=47.00;MQ0=21;MQRankSum=-10.614;QD=6.17;ReadPosRankSum=-6.366;VQSLOD=0.1593;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:16:9.81:84,10,0	1/1:6,2:8:7.27:119,7,0	0/0:11,0:1:3.01:0,3,86	0/0:28,0:8:17.76:0,18,354	0/1:13,0:13:0.10:0,0,0	0/0:25,0:25:66.23:0,66,2509	0/0:32,0:31:66.22:0,66,2074	1/1:17,0:12:18.06:308,18,0	1/1:29,2:28:8.92:79,9,0	0/1:22,3:25:99:534,0,308	0/1:10,0:10:0.10:0,0,0	0/0:62,0:61:99:0,165,5593	0/0:53,0:53:99:0,144,4797	0/0:63,0:63:99:0,163,5523	1/1:35,3:37:6:93,6,0	0/0:53,0:53:99:0,126,4766	0/1:8,2:10:7.24:195,0,7	0/1:34,0:34:3.39:3,0,2306	1/1:7,0:1:3.01:40,3,0	0/1:17,1:18:0.01:0,0,0	1/1:26,0:20:11.20:64,11,0	0/0:40,0:40:99:0,108,4126	0/0:26,0:25:72.25:0,72,2783	0/0:56,0:56:99:0,150,5437	1/1:22,1:23:2.96:21,3,0	0/1:25,3:27:99:518,0,239	0/1:11,1:13:31.22:31,0,104	1/1:3,0:3:6.02:87,6,0
chr10	57381982	.	TGTGC	T	104.11	PASS	AB=0.939;AC=9;AF=0.161;AN=56;BaseQRankSum=7.686;DP=778;FS=15.563;HRun=0;HaplotypeScore=296.9195;InbreedingCoeff=0.5324;MQ=47.09;MQ0=22;MQRankSum=-7.136;QD=0.90;ReadPosRankSum=-3.139;VQSLOD=0.4674;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:14:9.58:64,10,0	0/0:8,0:8:7.44:0,7,59	0/0:11,0:1:3.01:0,3,86	0/0:26,0:7:21.03:0,21,438	0/1:12,0:12:0:0,0,0	0/0:26,0:26:78.21:0,78,2001	0/0:32,0:30:78.20:0,78,1953	0/0:19,0:14:21.61:0,22,132	1/1:29,1:27:3.20:15,3,0	0/0:28,0:28:36.89:0,37,758	0/0:11,0:11:1.72:0,2,5	0/0:66,0:65:99:0,180,4652	0/0:52,0:52:99:0,153,4040	0/0:59,0:59:99:0,172,4555	0/0:38,0:37:4.25:0,4,25	0/0:52,0:52:99:0,135,3598	0/1:7,2:9:88.32:88,0,91	0/0:32,0:32:59.69:0,60,2125	0/0:8,0:1:2.98:0,3,21	0/1:19,0:19:0:0,0,0	1/1:24,7:23:14.40:62,14,0	0/0:41,0:41:99:0,120,3203	0/0:28,0:27:78.27:0,78,2155	0/0:59,0:59:99:0,170,4417	0/0:23,0:23:2.80:0,3,31	0/0:26,0:25:30.01:0,30,591	0/0:14,0:14:14.05:0,14,200	0/0:3,0:3:8.92:0,9,65
chr10	57381983	.	G	GCA	436.64	PASS	AB=0.820;AC=17;AF=0.304;AN=56;BaseQRankSum=10.479;DP=776;FS=0.000;HRun=0;HaplotypeScore=274.3620;InbreedingCoeff=0.2032;MQ=47.12;MQ0=21;MQRankSum=-7.784;QD=1.98;ReadPosRankSum=-4.930;VQSLOD=1.3501;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:12,3:14:6.71:0,7,52	1/1:6,2:8:8.02:54,8,0	0/0:14,0:1:3.01:0,3,49	0/0:26,0:7:18.93:0,19,259	0/1:7,5:12:0:0,0,0	0/0:26,0:26:78.23:0,78,1216	0/0:31,0:29:75.23:0,75,1187	0/1:20,0:15:7.28:14,0,7	0/1:20,8:26:2.84:3,0,10	0/1:23,4:27:99:154,0,380	1/1:8,3:11:1.21:4,1,0	0/0:66,0:65:99:0,178,2797	0/0:51,0:51:99:0,150,2391	0/0:59,0:59:99:0,166,2680	1/1:22,16:37:3.70:23,4,0	0/0:52,0:52:99:0,135,2142	0/1:8,1:9:40.12:64,0,40	0/0:31,0:31:72.96:0,73,1265	1/1:7,1:1:3.01:32,3,0	0/1:11,8:19:0:0,0,0	0/0:30,1:23:2.18:0,2,7	0/0:42,0:42:99:0,117,1876	0/0:29,0:28:78.27:0,78,1265	0/0:59,0:59:99:0,168,2645	0/0:11,12:23:2.99:0,3,30	0/1:18,6:23:99:183,0,304	0/1:12,2:14:26.38:26,0,118	0/1:2,1:3:13.05:23,0,13
chr10	57381985	.	GCA	G	545.34	PASS	AB=0.773;AC=22;AF=0.393;AN=56;BaseQRankSum=10.930;DP=760;FS=8.815;HRun=0;HaplotypeScore=264.1707;InbreedingCoeff=0.3754;MQ=47.43;MQ0=22;MQRankSum=-9.758;QD=2.15;ReadPosRankSum=-3.858;VQSLOD=0.5976;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:7,8:14:8.68:125,9,0	1/1:6,2:8:2.08:19,2,0	0/0:15,0:1:3.01:0,3,61	0/0:24,0:8:19.87:0,20,342	0/1:6,5:11:0.10:0,0,0	0/0:26,0:26:78.27:0,78,1505	0/0:30,0:28:72.25:0,72,1412	0/1:13,5:13:14.45:16,0,14	1/1:18,8:24:7.17:46,7,0	0/1:21,5:26:99:167,0,338	1/1:5,4:9:0.72:1,1,0	0/0:66,0:65:99:0,178,3408	0/0:51,0:51:99:0,151,2917	0/0:58,0:58:99:0,169,3252	1/1:18,17:34:3.45:11,3,0	0/0:54,0:54:99:0,132,2573	0/1:7,2:9:10.10:79,0,10	0/0:30,0:30:30.96:0,31,1460	1/1:7,2:2:2.97:20,3,0	0/1:10,9:19:0:0,0,0	1/1:22,6:23:15.32:97,15,0	0/0:43,0:43:99:0,126,2451	0/0:29,0:28:81.28:0,81,1593	0/0:58,0:59:99:0,163,3200	0/0:9,12:21:2.60:0,3,13	0/1:17,7:22:99:112,0,344	0/1:10,2:12:1.61:2,0,124	0/1:2,1:3:3.17:11,0,3
chr10	57381987	.	A	ATG	2606.41	PASS	AB=0.903;AC=29;AF=0.537;AN=54;BaseQRankSum=10.704;DP=793;FS=4.376;HRun=0;HaplotypeScore=280.6242;InbreedingCoeff=0.6711;MQ=47.13;MQ0=22;MQRankSum=-11.086;QD=8.43;ReadPosRankSum=-6.594;VQSLOD=1.4609;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:15:4.93:20,5,0	1/1:8,1:9:12.04:180,12,0	0/0:16,0:1:3.01:0,3,39	0/0:24,0:8:22.23:0,22,255	0/1:11,1:12:0:0,0,0	0/0:27,0:27:75.24:0,75,974	0/0:31,0:29:66.21:0,66,868	1/1:15,5:16:33.11:541,33,0	1/1:26,2:26:5.83:65,6,0	1/1:22,8:30:52.76:819,53,0	1/1:8,2:10:2.98:51,3,0	0/0:66,0:65:99:0,166,2168	0/0:52,0:52:99:0,138,1798	0/0:58,0:58:99:0,156,2024	1/1:35,2:36:6.01:94,6,0	0/0:53,0:53:99:0,120,1553	1/1:9,0:9:5.03:105,5,0	0/1:28,1:29:60.36:60,0,826	1/1:10,0:2:3.01:40,3,0	./.	0/1:25,7:25:0.05:1,0,0	0/0:45,0:45:99:0,129,1679	0/0:30,0:29:75.24:0,75,986	0/0:61,0:61:99:0,144,1957	1/1:21,2:23:2.83:45,3,0	1/1:25,2:25:31.98:593,32,0	1/1:12,2:14:5:90,5,0	1/1:2,1:3:6.02:87,6,0
chr10	57381995	.	GCA	G	158.13	PASS	AB=0.864;AC=6;AF=0.107;AN=56;BaseQRankSum=8.035;DP=815;FS=0.000;HRun=0;HaplotypeScore=290.5601;InbreedingCoeff=0.1740;MQ=47.44;MQ0=14;MQRankSum=-7.111;QD=1.51;ReadPosRankSum=-4.225;VQSLOD=1.3673;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:20:14.80:112,15,0	0/0:11,0:12:12.04:0,12,150	0/0:16,0:2:6.02:0,6,109	0/0:25,1:8:13.26:0,13,401	0/0:12,0:13:3.01:0,3,50	0/0:28,0:28:81.28:0,81,1614	0/0:33,0:31:84.29:0,84,1596	0/0:22,1:20:51.14:0,51,681	0/0:19,0:19:10.80:0,11,125	0/0:31,0:32:79.21:0,79,1049	0/1:10,0:10:0.59:1,0,26	0/0:68,0:67:99:0,187,3671	0/0:50,0:50:99:0,147,2868	0/0:62,0:62:99:0,181,3459	0/0:31,0:32:8.89:0,9,131	0/0:54,0:54:99:0,132,2525	0/1:4,4:9:99:107,0,114	0/0:27,1:29:64.02:0,64,1457	0/0:9,0:2:6.02:0,6,102	0/0:21,3:24:2.86:0,3,49	0/1:33,10:37:47.27:47,0,69	0/0:46,0:46:99:0,135,2704	0/0:30,0:29:66.70:0,67,1586	0/0:58,0:58:99:0,148,3175	0/1:22,0:23:6.55:7,0,95	0/0:27,1:26:19.89:0,20,811	0/0:13,0:14:9.96:0,10,127	0/0:2,0:2:6.02:0,6,76
chr10	57382060	.	TG	T	6909.06	PASS	AB=0.673;AC=15;AF=0.268;AN=56;BaseQRankSum=13.135;DP=1185;FS=0.892;HRun=1;HaplotypeScore=458.8991;InbreedingCoeff=-0.3701;MQ=43.60;MQ0=27;MQRankSum=-14.511;QD=11.87;ReadPosRankSum=-8.022;VQSLOD=1.4106;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:20,9:29:49.44:222,0,49	0/1:8,14:22:99:262,0,177	0/0:46,0:6:18.06:0,18,255	0/0:48,0:3:9.03:0,9,132	0/1:14,24:38:34.67:253,0,35	0/0:27,0:27:75.23:0,75,1152	0/0:45,0:43:99:0,105,1653	0/1:20,24:43:99:884,0,398	0/1:16,18:33:99:472,0,168	0/1:44,33:71:99:1005,0,1245	0/1:15,19:34:99:193,0,134	0/0:68,0:68:99:0,199,3148	0/0:64,0:64:99:0,190,2946	0/0:61,0:61:99:0,172,2676	0/1:28,18:45:99:595,0,369	0/0:54,0:54:99:0,152,2374	0/0:15,0:15:25.74:0,26,364	0/0:36,0:36:99:0,99,1562	0/1:5,4:7:99:145,0,122	0/1:20,21:41:99:414,0,123	0/1:42,16:49:99:388,0,222	0/0:44,0:44:99:0,129,2037	0/0:36,0:36:99:0,101,1561	0/0:59,0:59:99:0,151,2363	0/1:21,16:37:99:265,0,442	0/1:32,30:60:99:915,0,1109	0/1:10,18:28:99:491,0,266	0/1:9,13:22:90.28:405,0,90
chr10	57382064	.	TGCTC	T	1769.50	PASS	AB=0.944;AC=10;AF=0.179;AN=56;BaseQRankSum=9.771;DP=1165;FS=0.000;HRun=0;HaplotypeScore=513.7344;InbreedingCoeff=-0.2335;MQ=43.68;MQ0=27;MQRankSum=-11.027;QD=4.82;ReadPosRankSum=-8.041;VQSLOD=-0.7557;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:23,6:29:99:285,0,108	0/1:22,0:22:67.25:67,0,245	0/0:44,0:5:15.05:0,15,275	0/0:44,0:2:6.02:0,6,129	0/1:33,5:38:33.30:241,0,33	0/0:26,0:26:74.99:0,75,1413	0/0:46,0:44:99:0,106,1918	0/1:29,13:41:99:528,0,801	0/1:34,0:33:32.31:32,0,242	0/1:69,3:66:99:122,0,2062	0/1:31,0:31:99:194,0,102	0/0:73,0:73:99:0,207,3954	0/0:68,0:68:99:0,197,3641	0/0:60,0:60:99:0,161,3012	0/0:42,0:41:62.30:0,62,521	0/0:51,0:51:99:0,123,2575	0/0:15,0:15:11.40:0,11,341	0/0:36,0:36:94.49:0,94,1775	0/0:10,0:7:21.06:0,21,309	0/1:40,0:40:99:166,0,160	0/0:59,1:51:5.28:0,5,325	0/0:41,0:41:99:0,117,2339	0/0:34,0:34:87.27:0,87,1805	0/0:60,0:60:99:0,150,2902	0/1:37,0:37:49.13:49,0,387	0/0:59,0:57:36.26:0,36,1772	0/0:27,0:27:11.13:0,11,643	0/1:22,0:22:99:228,0,265
chr10	57382087	.	G	GTA	6244.03	PASS	AB=0.866;AC=25;AF=0.446;AN=56;BaseQRankSum=7.698;DP=1203;FS=0.296;HRun=0;HaplotypeScore=437.7235;InbreedingCoeff=0.6430;MQ=44.21;MQ0=33;MQRankSum=-12.222;QD=10.84;ReadPosRankSum=-1.760;VQSLOD=3.7001;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:14,10:24:8.92:145,0,9	0/1:26,3:29:5.49:205,0,5	0/0:41,0:7:17.89:0,18,184	0/0:48,0:5:9.03:0,9,120	0/0:32,6:38:13.29:0,13,79	0/0:28,0:28:73.44:0,73,1051	0/0:50,0:48:99:0,102,1387	0/1:37,0:30:99:186,0,291	1/1:30,8:38:12.52:141,13,0	1/1:59,13:64:54.87:1491,55,0	1/1:33,2:35:35.43:360,35,0	0/0:71,0:71:99:0,195,2635	0/0:63,0:63:99:0,181,2459	0/0:68,0:68:99:0,180,2326	0/1:33,12:43:37.34:67,0,37	0/0:60,0:60:99:0,165,2226	1/1:10,11:20:24.07:351,24,0	0/0:34,0:34:93.26:0,93,1259	0/1:12,0:4:28.28:28,0,36	1/1:38,3:41:12.61:351,13,0	1/1:61,16:69:27.69:311,28,0	0/0:36,0:36:99:0,105,1458	0/0:33,0:33:89.30:0,89,1142	0/0:56,0:57:99:0,134,1868	1/1:24,10:34:21.62:301,22,0	1/1:48,11:57:36.65:1324,37,0	1/1:21,5:25:34.97:448,35,0	1/1:20,3:23:48.07:535,48,0
chr10	57382089	.	A	ATG	8901.34	PASS	AB=0.851;AC=30;AF=0.536;AN=56;BaseQRankSum=9.175;DP=1203;FS=2.057;HRun=0;HaplotypeScore=424.4399;InbreedingCoeff=0.8310;MQ=44.25;MQ0=34;MQRankSum=-15.484;QD=14.38;ReadPosRankSum=-7.371;VQSLOD=2.7938;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:26:19.82:157,20,0	1/1:15,13:28:24.78:326,25,0	0/0:40,0:7:12.04:0,12,156	0/0:46,1:4:9.03:0,9,118	0/1:29,8:37:11.03:44,0,11	0/0:29,0:29:58.26:0,58,965	0/0:47,2:48:99:0,99,1270	0/1:38,6:36:43.05:379,0,43	1/1:18,23:42:17.18:253,17,0	1/1:40,33:65:99:2073,144,0	1/1:18,15:33:40.63:580,41,0	0/0:70,1:71:99:0,190,2465	0/0:63,0:63:99:0,178,2274	0/0:64,1:65:99:0,159,2053	1/1:35,10:44:16.85:129,17,0	0/0:59,0:59:99:0,151,2130	1/1:20,2:21:29.13:341,29,0	0/0:34,0:34:87.22:0,87,1107	1/1:14,0:4:6.02:80,6,0	1/1:19,21:41:41.53:613,42,0	1/1:56,19:66:26.07:411,26,0	0/0:37,0:37:99:0,105,1343	0/0:32,0:32:61.09:0,61,929	0/0:57,0:57:99:0,117,1698	1/1:23,10:33:31.30:372,31,0	1/1:41,17:56:99:1943,133,0	1/1:12,9:21:36.99:475,37,0	1/1:9,14:25:48.16:725,48,0
chr10	57382091	.	G	GTA	4601.27	PASS	AB=1.000;AC=27;AF=0.482;AN=56;BaseQRankSum=10.813;DP=1206;FS=2.073;HRun=0;HaplotypeScore=435.8052;InbreedingCoeff=0.5798;MQ=44.34;MQ0=29;MQRankSum=-13.373;QD=7.39;ReadPosRankSum=-2.065;VQSLOD=3.2608;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:23,2:25:24.92:174,25,0	0/1:28,0:28:18.61:141,0,19	0/0:40,0:9:23.88:0,24,262	0/0:48,0:5:12.01:0,12,152	0/1:39,0:39:45.92:82,0,46	0/0:28,0:28:77.67:0,78,1171	0/0:48,0:47:99:0,111,1609	0/1:46,0:38:99:161,0,310	1/1:41,1:42:15.91:148,16,0	1/1:72,1:66:42.91:958,43,0	1/1:30,2:32:38.09:376,38,0	0/0:73,0:73:99:0,207,3034	0/0:63,0:63:99:0,184,2741	0/0:66,0:66:99:0,180,2587	0/1:48,0:46:20.61:21,0,34	0/0:58,0:58:99:0,168,2540	1/1:20,2:21:2.32:149,2,0	0/0:34,0:34:96.24:0,96,1386	0/1:13,0:4:12.02:32,0,12	1/1:40,1:41:39.30:339,39,0	1/1:68,6:64:11.33:163,11,0	0/0:37,0:37:99:0,111,1643	0/0:32,0:32:86.36:0,86,1234	0/0:56,0:56:99:0,137,2060	1/1:32,0:32:1.56:148,2,0	1/1:55,4:57:62.36:1070,62,0	1/1:24,0:23:34.78:244,35,0	1/1:25,0:25:30.73:396,31,0
chr10	57382096	.	TGC	T	1096.93	PASS	AB=0.851;AC=13;AF=0.232;AN=56;BaseQRankSum=12.129;DP=1185;FS=17.741;HRun=0;HaplotypeScore=418.1707;InbreedingCoeff=-0.3027;MQ=45.21;MQ0=21;MQRankSum=-11.559;QD=2.23;ReadPosRankSum=-3.483;VQSLOD=-0.2225;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:21,4:25:99:117,0,147	0/1:17,8:25:99:178,0,123	0/0:36,0:11:30.04:0,30,446	0/0:44,1:4:12.04:0,12,225	0/1:23,11:34:36.61:78,0,37	0/0:28,0:28:62.69:0,63,1552	0/0:48,0:47:99:0,114,2135	0/1:36,5:31:99:173,0,563	0/1:44,2:46:45.12:45,0,128	0/1:63,7:65:91.18:91,0,1492	0/1:23,5:28:66.67:67,0,229	0/0:72,0:72:99:0,211,4070	0/0:64,0:64:99:0,190,3654	0/0:66,0:66:99:0,189,3461	0/1:42,6:46:21.03:21,0,152	0/0:63,0:63:99:0,183,3489	0/0:22,0:21:29.15:0,29,351	0/0:38,0:38:99:0,108,1910	0/0:12,0:3:8.90:0,9,65	0/1:29,7:36:73.08:73,0,276	0/0:74,3:68:26.93:0,27,415	0/0:38,0:38:99:0,114,2204	0/0:28,0:28:76.66:0,77,1524	0/0:56,1:57:99:0,140,2745	0/1:25,6:31:51.34:51,0,265	0/1:47,12:57:99:317,0,1146	0/1:20,3:22:7.32:7,0,352	0/1:19,6:25:32.09:32,0,384
chr10	57382125	.	T	TTGTG	933.61	PASS	AB=0.795;AC=3;AF=0.054;AN=56;BaseQRankSum=4.646;DP=1233;FS=5.385;HRun=0;HaplotypeScore=369.5792;InbreedingCoeff=0.7038;MQ=48.44;MQ0=16;MQRankSum=-3.205;QD=15.82;ReadPosRankSum=-5.972;VQSLOD=1.4077;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:26,9:33:6.93:661,0,7	0/0:23,0:23:31.07:0,31,415	0/0:51,0:21:20.14:0,20,619	0/0:56,0:17:12.11:0,12,470	1/1:14,9:23:26.87:378,27,0	0/0:26,0:26:69.12:0,69,1130	0/0:40,0:39:99:0,99,1602	0/0:50,0:43:59.37:0,59,1305	0/0:59,0:58:99:0,114,975	0/0:72,0:69:99:0,135,2451	0/0:26,0:26:45.15:0,45,610	0/0:80,0:80:99:0,217,3560	0/0:57,0:57:99:0,144,2387	0/0:65,0:65:99:0,171,2824	0/0:54,0:52:99:0,140,1278	0/0:57,0:57:99:0,154,2587	0/0:29,0:28:60:0,60,803	0/0:34,0:34:87.30:0,87,1497	0/0:16,0:12:33.06:0,33,504	0/0:39,0:39:84.19:0,84,1139	0/0:93,0:88:99:0,143,1731	0/0:30,0:30:84.24:0,84,1398	0/0:28,0:28:69.21:0,69,1124	0/0:57,0:57:99:0,129,2076	0/0:24,0:24:54.96:0,55,697	0/0:59,0:58:99:0,132,2123	0/0:27,0:26:65.84:0,66,770	0/0:21,0:21:33.11:0,33,545
chr10	57382203	.	A	ATG	1144.83	PASS	AB=0.874;AC=13;AF=0.232;AN=56;BaseQRankSum=12.620;DP=1162;FS=11.118;HRun=0;HaplotypeScore=318.9822;InbreedingCoeff=-0.3011;MQ=48.39;MQ0=28;MQRankSum=-10.255;QD=2.64;ReadPosRankSum=-8.847;VQSLOD=-0.5580;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:27,4:30:64.06:64,0,229	0/1:7,1:8:25.28:25,0,218	0/0:56,0:24:54.77:0,55,712	0/0:49,0:21:50.82:0,51,649	0/1:27,4:31:47.91:48,0,535	0/0:29,0:29:81.27:0,81,1158	0/0:42,0:42:99:0,108,1545	0/0:56,1:48:99:0,102,1372	0/1:40,15:53:99:379,0,876	0/1:58,2:59:59.56:60,0,1696	0/1:12,4:13:52.13:52,0,253	0/0:59,0:59:99:0,162,2264	0/0:48,0:48:99:0,135,1913	0/0:47,0:47:99:0,132,1872	0/1:63,16:78:99:205,0,1284	0/0:61,0:60:99:0,181,2507	0/0:30,2:30:30.10:0,30,428	0/0:32,2:34:76.03:0,76,1250	0/1:18,2:18:99:160,0,464	0/1:24,3:25:45.99:46,0,785	0/0:89,4:85:99:0,108,1622	0/0:30,0:30:84.28:0,84,1204	0/0:25,0:25:60.17:0,60,822	0/0:67,0:67:99:0,178,2497	0/1:16,2:17:20.63:21,0,452	0/1:52,5:53:99:176,0,1350	0/1:21,1:22:15.04:15,0,604	0/1:5,3:8:47.54:48,0,190
chr10	57382213	.	ATG	A	7761.04	PASS	AB=0.750;AC=31;AF=0.554;AN=56;BaseQRankSum=17.018;DP=1126;FS=55.434;HRun=0;HaplotypeScore=298.2719;InbreedingCoeff=0.8921;MQ=48.03;MQ0=32;MQRankSum=-12.676;QD=13.64;ReadPosRankSum=-1.424;VQSLOD=2.9715;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:16,8:23:34.28:86,0,34	1/1:6,2:8:11.11:98,11,0	0/0:57,0:20:43.83:0,44,634	0/0:53,0:20:41.02:0,41,611	1/1:13,17:30:26.13:327,26,0	0/0:27,0:27:78.27:0,78,1327	0/0:45,0:45:99:0,105,1744	1/1:29,27:45:58.23:699,58,0	1/1:33,20:50:26.03:536,26,0	1/1:25,26:50:92.87:1199,93,0	1/1:13,4:14:15.55:146,16,0	0/0:59,0:59:99:0,157,2613	0/0:52,0:52:99:0,147,2450	0/0:49,0:49:99:0,132,2230	1/1:43,31:73:55.13:807,55,0	0/0:60,0:59:99:0,172,2859	1/1:13,14:25:26.72:304,27,0	0/0:33,1:34:86.66:0,87,1426	1/1:15,7:19:41.28:441,41,0	1/1:9,16:23:45.64:556,46,0	1/1:43,39:74:63.92:697,64,0	0/0:30,0:30:84.29:0,84,1422	0/0:20,0:20:45.15:0,45,758	0/0:69,1:70:99:0,181,3000	1/1:10,7:16:7.22:227,7,0	1/1:25,29:50:98.09:1189,98,0	1/1:13,10:23:6.01:276,6,0	1/1:3,3:6:14.78:173,15,0
chr10	57382220	.	TGTGTTC	T	3182.19	PASS	AB=0.811;AC=15;AF=0.268;AN=56;BaseQRankSum=11.776;DP=1121;FS=20.754;HRun=0;HaplotypeScore=378.6584;InbreedingCoeff=-0.3652;MQ=47.81;MQ0=40;MQRankSum=-12.500;QD=6.59;ReadPosRankSum=-1.476;VQSLOD=0.7768;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:19,5:23:86.20:179,0,86	0/1:4,3:7:99:123,0,105	0/0:63,0:21:43.73:0,44,1309	0/0:53,0:22:47.03:0,47,1320	0/1:20,9:29:63.51:64,0,351	0/0:26,0:26:78.27:0,78,2797	0/0:45,0:44:99:0,114,3790	0/1:65,0:52:17.17:17,0,1442	0/1:37,16:50:99:728,0,660	0/1:39,5:43:99:253,0,1229	0/1:8,7:12:99:100,0,145	0/0:62,0:62:99:0,184,6085	0/0:51,0:51:99:0,153,5349	0/0:49,0:49:99:0,144,4870	0/1:39,34:72:99:367,0,1069	0/0:60,0:59:99:0,177,6081	0/1:25,3:26:68.50:68,0,364	0/0:33,1:34:94.56:0,95,3226	0/1:20,1:17:33.60:34,0,634	0/1:19,5:22:99:123,0,631	0/0:71,5:67:70.54:0,71,1085	0/0:34,0:34:99:0,102,3345	0/0:19,0:19:54.15:0,54,1657	0/0:66,0:66:99:0,180,6161	0/1:9,4:12:97.05:97,0,262	0/1:46,10:52:99:807,0,1211	0/1:18,5:22:99:268,0,355	0/1:5,3:8:99:112,0,128
chr10	57382224	.	TTC	T	1437.94	PASS	AB=0.967;AC=16;AF=0.286;AN=56;BaseQRankSum=14.910;DP=1121;FS=9.128;HRun=0;HaplotypeScore=323.9405;InbreedingCoeff=-0.1789;MQ=47.06;MQ0=42;MQRankSum=-14.475;QD=2.97;ReadPosRankSum=-0.663;VQSLOD=0.7760;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:25,2:26:7.26:70,7,0	0/1:5,1:6:3.67:64,0,4	0/0:60,0:19:44.32:0,44,719	0/0:48,2:21:45.71:0,46,831	0/1:28,0:28:30.78:31,0,37	0/0:28,0:28:84.29:0,84,1666	0/0:44,3:46:99:0,117,2295	0/1:64,3:52:34.16:34,0,724	0/1:49,4:50:96.85:407,0,97	0/1:42,1:42:93.39:93,0,216	0/1:14,0:11:11.61:53,0,12	0/0:61,0:61:99:0,181,3457	0/0:51,0:51:99:0,154,3040	0/0:52,0:52:99:0,153,2914	0/1:70,1:70:99:174,0,132	0/0:59,0:58:99:0,169,3377	0/1:27,1:26:59.60:60,0,60	0/0:34,0:34:99:0,99,1870	0/1:23,0:17:22.17:22,0,263	0/1:26,0:24:59.19:59,0,95	0/0:73,3:66:36.73:0,37,375	0/0:34,0:34:99:0,99,1906	0/0:19,0:19:51.17:0,51,983	0/0:65,0:65:99:0,178,3476	0/1:13,0:12:13.96:39,0,14	0/1:52,1:49:99:322,0,162	0/1:20,3:22:26.41:139,0,26	0/1:9,0:9:9.48:33,0,9
chr10	57383284	.	T	TG	15482.22	PASS	AB=0.933;AC=33;AF=0.589;AN=56;BaseQRankSum=-13.678;DP=627;FS=2.740;HRun=0;HaplotypeScore=61.0909;InbreedingCoeff=0.9542;MQ=75.63;MQ0=1;MQRankSum=-1.941;QD=36.26;ReadPosRankSum=3.168;VQSLOD=4.7381;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,34:37:99:1389,100,0	1/1:0,7:7:17.95:234,18,0	0/0:28,0:24:55.99:0,56,736	0/0:25,0:21:28.76:0,29,568	1/1:0,28:28:78.11:1077,78,0	0/0:23,0:23:69.19:0,69,927	0/0:10,0:10:30.09:0,30,404	1/1:0,27:27:81.14:1039,81,0	1/1:0,22:22:54.18:789,54,0	1/1:1,16:17:40.36:650,40,0	1/1:1,30:31:90.22:1279,90,0	0/0:12,0:12:36.09:0,36,456	0/0:8,0:8:24.06:0,24,304	0/0:12,0:12:36.11:0,36,486	1/1:1,26:27:63.21:919,63,0	0/1:13,1:14:1.77:2,0,457	1/1:3,32:35:72.24:1053,72,0	0/0:26,0:26:72.14:0,72,940	1/1:1,24:25:72.21:1000,72,0	1/1:0,40:40:99:1543,111,0	1/1:1,24:25:66.22:950,66,0	0/0:17,0:17:51.13:0,51,651	0/0:25,0:25:72.22:0,72,972	0/0:13,0:13:39.12:0,39,528	1/1:0,13:13:33.11:482,33,0	1/1:0,33:33:99:1373,99,0	1/1:0,33:33:81.13:1182,81,0	1/1:0,13:13:36.12:523,36,0
chr10	57383540	.	AC	A	2150.52	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=4.562;DP=641;FS=13.251;HRun=1;HaplotypeScore=72.9075;InbreedingCoeff=0.9992;MQ=74.85;MQ0=0;MQRankSum=-1.950;QD=37.73;ReadPosRankSum=-4.040;VQSLOD=1.2711;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,132,2082	1/1:0,9:9:27.09:377,27,0	0/0:19,0:19:54.14:0,54,813	0/0:23,0:23:69.14:0,69,967	0/0:34,0:34:99:0,102,1628	0/0:14,0:14:42.13:0,42,645	0/0:23,0:23:69.24:0,69,1103	1/1:0,32:32:96.28:1287,96,0	0/0:22,0:22:66.22:0,66,1049	0/0:26,0:26:78.27:0,78,1246	0/0:27,0:27:81.26:0,81,1264	0/0:18,0:18:54.18:0,54,863	0/0:16,0:16:48.15:0,48,743	0/0:15,0:15:45.15:0,45,714	0/0:29,0:29:87.30:0,87,1390	0/0:28,0:28:84.27:0,84,1319	1/1:0,16:16:45.15:629,45,0	0/0:18,0:18:51.17:0,51,811	0/0:18,0:18:54.17:0,54,840	0/0:34,0:33:99:0,99,1557	0/0:23,0:23:69.22:0,69,1076	0/0:27,0:27:81.28:0,81,1289	0/0:18,0:18:54.17:0,54,839	0/0:23,0:23:63.19:0,63,979	0/0:9,0:9:27.09:0,27,429	0/0:35,0:35:99:0,105,1613	0/0:27,0:27:81.26:0,81,1267	0/0:14,0:14:42.14:0,42,670
chr10	57384084	.	ACAG	A	353.92	PASS	AB=1.000;AC=5;AF=0.109;AN=46;BaseQRankSum=0.868;DP=520;FS=9.009;HRun=0;HaplotypeScore=101.5195;InbreedingCoeff=0.4942;MQ=68.81;MQ0=3;MQRankSum=0.192;QD=5.28;ReadPosRankSum=-1.141;VQSLOD=1.6991;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:4,0:4:8.98:0,9,103	0/0:23,0:19:2.99:0,3,24	0/1:24,0:17:4.78:5,0,8	./.	0/0:12,0:12:14.90:0,15,148	0/0:30,0:29:44.99:0,45,616	0/0:11,0:11:12.42:0,12,98	0/0:26,0:25:38.78:0,39,414	0/0:9,0:9:2.90:0,3,16	./.	0/0:30,0:30:29.56:0,30,713	0/0:23,0:23:19.35:0,19,502	0/0:19,0:19:36.05:0,36,534	0/0:40,0:40:53.92:0,54,564	1/1:7,20:27:11.10:334,11,0	0/0:19,0:19:39.02:0,39,609	1/1:6,10:16:9.03:122,9,0	0/0:14,0:13:3.69:0,4,14	./.	0/0:36,0:35:14.80:0,15,118	0/0:11,0:11:2.98:0,3,21	./.	0/0:47,0:47:99:0,99,1475	0/0:7,0:7:5.99:0,6,50	0/0:11,0:11:0.94:0,1,2	0/0:26,0:26:53.78:0,54,586	0/0:3,0:3:3.01:0,3,35
chr10	57384117	.	GCAACAACAA	G	3852.95	PASS	AB=0.957;AC=20;AF=0.370;AN=54;BaseQRankSum=2.599;DP=530;FS=5.707;HRun=0;HaplotypeScore=158.9560;InbreedingCoeff=0.4369;MQ=51.52;MQ0=11;MQRankSum=3.192;QD=15.35;ReadPosRankSum=-5.464;VQSLOD=0.4571;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:15,0:15:0.94:66,0,1	0/1:7,0:7:60.11:60,0,104	0/0:8,0:5:9.03:0,9,180	0/0:18,0:10:18.06:0,18,483	./.	0/0:21,0:20:47.19:0,47,1268	0/0:30,0:28:75.24:0,75,2313	1/1:10,0:15:23.24:336,23,0	0/1:25,0:29:99:584,0,460	1/1:8,9:16:18.03:369,18,0	0/0:2,7:9:0.47:0,0,1	0/0:25,0:26:60.21:0,60,2173	0/0:19,0:21:45.14:0,45,1506	0/0:20,0:20:48.16:0,48,1734	0/1:29,0:32:99:295,0,640	0/0:30,0:30:53.39:0,53,1410	0/1:21,0:21:99:261,0,535	0/0:17,0:17:24.07:0,24,551	1/1:5,0:5:5.98:48,6,0	1/1:5,7:11:1.92:52,2,0	1/1:31,0:32:19.38:625,19,0	0/0:10,0:10:8.79:0,9,157	0/0:8,0:8:17.65:0,18,340	0/0:50,0:49:99:0,111,4059	1/1:8,0:9:5.05:214,5,0	1/1:8,12:20:16.96:460,17,0	0/1:30,0:31:99:483,0,782	0/0:2,0:2:5.98:0,6,49
chr10	57384119	.	A	AGC	160.38	PASS	AB=0.859;AC=5;AF=0.093;AN=54;BaseQRankSum=5.885;DP=515;FS=1.891;HRun=0;HaplotypeScore=119.4370;InbreedingCoeff=-0.0279;MQ=51.81;MQ0=12;MQRankSum=-0.909;QD=1.42;ReadPosRankSum=1.810;VQSLOD=1.6321;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:5.24:0,5,18	0/0:7,0:7:4.48:0,4,30	0/0:9,0:5:9.01:0,9,110	0/0:18,0:9:26.99:0,27,349	./.	0/0:18,0:17:48.60:0,49,642	0/0:30,0:28:84.22:0,84,1269	0/1:19,0:15:21.77:22,0,213	0/1:26,4:29:80.28:80,0,113	0/0:14,0:13:22.48:0,22,133	0/0:8,0:8:0.47:0,0,1	0/0:25,0:25:69.21:0,69,1051	0/0:21,0:21:60.17:0,60,900	0/0:20,0:20:57.18:0,57,861	0/1:26,5:31:70.66:102,0,71	0/0:30,0:30:53.99:0,54,623	0/0:21,0:21:42.29:0,42,279	0/0:17,0:17:20.97:0,21,233	0/0:5,0:5:14.37:0,14,138	0/0:11,0:10:6.81:0,7,42	0/0:29,0:27:30.23:0,30,149	0/0:10,0:10:11.63:0,12,142	0/0:9,0:9:15.47:0,15,181	0/0:50,0:49:99:0,141,2169	0/0:11,0:11:9.19:0,9,37	0/0:18,0:18:27.56:0,28,221	0/1:27,4:31:47.24:47,0,201	0/1:1,1:2:11.84:23,0,12
chr10	57384120	.	A	AGCAG	773.05	PASS	AB=0.930;AC=10;AF=0.185;AN=54;BaseQRankSum=7.830;DP=514;FS=5.602;HRun=0;HaplotypeScore=136.1482;InbreedingCoeff=-0.1236;MQ=51.66;MQ0=12;MQRankSum=-2.073;QD=4.27;ReadPosRankSum=-0.608;VQSLOD=1.8768;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:12,0:12:7.92:17,0,8	0/1:6,0:6:7.07:7,0,40	0/0:10,0:5:14.50:0,15,188	0/0:17,0:8:24.04:0,24,379	./.	0/0:18,0:17:45.54:0,46,733	0/0:31,0:29:84.09:0,84,1585	0/1:18,0:14:29.57:30,0,172	0/1:26,4:29:99:200,0,127	0/1:14,0:13:21.84:22,0,78	0/0:8,0:8:0.47:0,0,1	0/0:26,0:26:72.20:0,72,1405	0/0:21,0:21:60.19:0,60,1156	0/0:19,0:19:54.16:0,54,1072	0/1:26,5:31:13.34:335,0,13	0/0:29,0:29:54.09:0,54,976	0/0:21,0:21:16.65:0,17,351	0/0:17,0:17:23.81:0,24,347	0/0:7,0:7:13.34:0,13,142	0/0:11,0:10:3.79:0,4,23	0/1:26,0:24:6.08:6,0,113	0/0:11,0:11:12.55:0,13,176	0/0:10,0:10:17.67:0,18,173	0/0:50,0:49:99:0,144,2770	0/1:10,0:10:6.77:41,0,7	0/0:18,0:18:2.83:0,3,157	0/1:28,4:32:99:202,0,159	0/1:1,1:2:12.71:49,0,13
chr10	57384213	.	G	GGTTTGTTT	1472.14	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-4.508;DP=657;FS=0.000;HRun=0;HaplotypeScore=191.3623;InbreedingCoeff=0.9764;MQ=74.52;MQ0=1;MQRankSum=-6.185;QD=30.04;ReadPosRankSum=0.591;VQSLOD=3.1979;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:96.31:0,96,2301	0/0:7,0:7:15.05:0,15,378	0/0:30,0:29:26.87:0,27,641	0/0:24,0:23:24.55:0,25,572	0/0:18,0:18:45.15:0,45,1147	0/0:22,0:22:42.14:0,42,1000	0/0:21,0:21:45.15:0,45,1114	0/0:17,0:17:27.05:0,27,574	0/0:23,0:23:48.14:0,48,1093	0/0:27,0:27:54.17:0,54,1278	0/0:18,0:18:36.11:0,36,862	0/0:25,0:25:54.17:0,54,1321	0/0:17,0:17:39.13:0,39,994	0/0:18,0:18:39.03:0,39,934	0/0:33,0:33:72.23:0,72,1711	1/1:16,14:33:21.07:872,21,0	0/0:32,0:32:17.17:0,17,1705	1/1:11,3:16:18.06:719,18,0	0/0:24,0:24:42.09:0,42,941	0/0:29,0:29:66.23:0,66,1634	0/0:32,0:32:66.23:0,66,1686	0/0:19,0:19:45.15:0,45,1122	0/0:30,0:30:60.15:0,60,1277	0/0:26,0:27:45.15:0,45,1124	0/0:20,0:20:45.15:0,45,1147	0/0:24,0:24:48.14:0,48,1047	0/0:21,0:21:48.16:0,48,1220	0/0:9,0:9:21.05:0,21,485
chr10	57386011	.	T	TAAACAAAGAA	23190.61	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=-0.399;DP=584;FS=0.000;HRun=0;HaplotypeScore=147.2941;InbreedingCoeff=0.9699;MQ=54.08;MQ0=0;MQRankSum=-10.908;QD=64.24;ReadPosRankSum=-3.393;VQSLOD=3.7144;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,24:36:48.16:2455,48,0	1/1:1,5:8:12.04:605,12,0	0/0:9,0:9:3.70:0,4,410	0/0:14,0:14:32.73:0,33,641	1/1:2,18:30:65.94:2333,66,0	0/0:22,0:22:60.14:0,60,1645	0/0:16,0:16:45.12:0,45,1273	1/1:3,17:29:66.37:2814,66,0	1/1:2,12:18:27.06:1200,27,0	1/1:2,14:26:68.79:1654,69,0	1/1:1,17:25:33.02:1167,33,0	0/0:25,0:25:72.13:0,72,1996	0/0:17,0:17:42.13:0,42,1194	0/0:15,0:15:41.16:0,41,1106	1/1:1,17:27:24.08:1244,24,0	0/0:17,0:18:54.14:0,54,1431	1/1:5,10:18:24.08:1239,24,0	0/0:14,0:14:42.12:0,42,1296	1/1:5,7:15:42.12:1089,42,0	1/1:1,12:20:33.02:1435,33,0	1/1:3,12:22:15.05:746,15,0	0/0:18,0:18:47.81:0,48,1065	0/0:24,0:24:61.41:0,61,1563	0/0:30,0:30:84.22:0,84,2468	1/1:3,15:31:24.08:1213,24,0	1/1:0,7:11:30.02:900,30,0	1/1:4,21:31:39.61:2020,40,0	1/1:0,10:11:21.07:1076,21,0
chr10	57386157	.	T	TGCGCGCGCGC	1542.47	PASS	AB=1.000;AC=5;AF=0.093;AN=54;BaseQRankSum=-2.636;DP=505;FS=10.375;HRun=0;HaplotypeScore=186.5640;InbreedingCoeff=0.7307;MQ=48.25;MQ0=19;MQRankSum=-5.602;QD=31.48;ReadPosRankSum=-3.490;VQSLOD=1.6309;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:33:26.29:0,26,719	1/1:4,0:4:9.03:268,9,0	./.	0/0:4,0:3:6.01:0,6,77	0/0:16,0:15:9.67:0,10,515	0/0:20,0:20:40.01:0,40,1136	0/0:25,0:26:40.74:0,41,984	0/1:23,0:20:0.83:826,0,1	0/0:19,0:19:24.30:0,24,411	0/0:24,0:23:52.25:0,52,959	0/0:14,0:13:21.07:0,21,401	0/0:20,0:20:32.09:0,32,1059	0/0:15,0:14:24.55:0,25,623	0/0:19,0:18:33.11:0,33,1016	0/0:13,0:12:30.05:0,30,490	0/0:15,0:15:33.10:0,33,913	1/1:10,9:22:10.36:565,10,0	0/0:21,0:21:51.18:0,51,1558	0/0:12,0:8:7.09:0,7,357	0/0:18,0:18:8.91:0,9,500	0/0:40,0:34:51.28:0,51,1012	0/0:9,0:8:12.51:0,13,389	0/0:14,0:13:18.06:0,18,551	0/0:34,0:33:87.28:0,87,2624	0/0:22,0:22:32.19:0,32,982	0/0:21,0:20:51.17:0,51,931	0/0:16,0:15:33.47:0,33,610	0/0:7,0:7:18.06:0,18,365
chr10	57386159	.	CGT	C	1304.86	PASS	AB=0.885;AC=27;AF=0.540;AN=50;BaseQRankSum=4.967;DP=507;FS=0.735;HRun=0;HaplotypeScore=116.2108;InbreedingCoeff=0.3492;MQ=47.85;MQ0=20;MQRankSum=-0.027;QD=4.31;ReadPosRankSum=1.049;VQSLOD=2.4909;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:16.47:0,16,139	./.	./.	./.	0/1:16,1:16:20.91:21,0,52	0/0:21,0:21:17:0,17,189	0/1:26,2:26:59.66:60,0,84	0/0:23,0:19:1.25:0,1,3	1/1:15,2:17:3:33,3,0	0/1:18,4:21:15.60:93,0,16	1/1:12,1:14:3:33,3,0	0/0:20,0:20:15.52:0,16,222	0/0:14,0:13:6.89:0,7,71	0/1:20,0:19:7.25:7,0,17	1/1:10,3:12:12.03:131,12,0	1/1:11,3:16:14.87:143,15,0	0/0:20,0:20:0:0,0,1	0/1:12,9:21:26.79:145,0,27	1/1:12,1:8:3.01:33,3,0	1/1:14,4:18:18.93:198,19,0	1/1:37,4:35:14.56:173,15,0	0/0:10,0:9:5.98:0,6,47	0/0:12,0:12:0.76:0,1,114	0/0:37,0:36:31.35:0,31,542	1/1:15,6:22:17.87:178,18,0	1/1:17,4:20:12.03:129,12,0	1/1:9,3:13:8.86:79,9,0	1/1:6,0:6:2.84:14,3,0
chr10	57387573	.	C	CA	15870.70	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=-12.754;DP=655;FS=8.117;HRun=0;HaplotypeScore=62.0248;InbreedingCoeff=0.9996;MQ=74.58;MQ0=0;MQRankSum=-3.880;QD=39.88;ReadPosRankSum=-0.472;VQSLOD=4.8230;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,46:46:99:1698,108,0	1/1:0,9:9:24.08:376,24,0	0/0:20,0:20:44.58:0,45,602	0/0:28,0:28:71.18:0,71,881	1/1:1,20:21:45.09:688,45,0	0/0:14,0:14:42.14:0,42,583	0/0:27,0:27:78.24:0,78,1054	1/1:1,24:25:69.17:1015,69,0	1/1:1,23:24:60.68:957,61,0	1/1:0,23:23:69.21:1074,69,0	1/1:0,18:18:45.15:718,45,0	0/0:27,0:27:81.24:0,81,1095	0/0:16,0:16:48.07:0,48,598	0/0:20,0:20:59.72:0,60,776	1/1:1,19:20:45.15:717,45,0	0/0:20,0:20:60.14:0,60,792	1/1:1,32:33:78.26:1226,78,0	0/0:20,0:20:60.18:0,60,814	1/1:2,22:24:69.04:1018,69,0	1/1:0,21:21:60.20:948,60,0	1/1:0,48:48:99:1964,123,0	0/0:17,0:17:47.98:0,48,625	0/0:17,0:17:42.04:0,42,542	0/0:31,0:31:93.27:0,93,1263	1/1:1,14:15:36.12:575,36,0	1/1:0,27:27:81.27:1268,81,0	1/1:4,28:32:72.25:1148,72,0	1/1:0,12:12:30.10:479,30,0
chr10	57392845	.	AAATTTTCT	A	1266.07	PASS	AB=0.520;AC=3;AF=0.054;AN=56;BaseQRankSum=6.525;DP=520;FS=5.469;HRun=0;HaplotypeScore=132.9942;InbreedingCoeff=0.6161;MQ=86.11;MQ0=0;MQRankSum=-6.294;QD=60.29;ReadPosRankSum=2.126;VQSLOD=3.6650;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,102,4497	0/0:6,0:6:18.06:0,18,815	0/0:17,0:17:48.11:0,48,1749	0/0:25,0:25:69.20:0,69,2755	0/0:22,0:22:63.20:0,63,2583	0/0:20,0:20:60.21:0,60,2669	0/0:15,0:15:42.14:0,42,1841	0/0:27,0:27:78.26:0,78,3150	0/0:17,0:17:48.16:0,48,2073	0/0:18,0:18:54.19:0,54,2414	0/0:27,0:27:81.28:0,81,3414	0/0:14,0:14:42.14:0,42,1770	0/0:17,0:17:51.18:0,51,2310	0/0:18,0:18:48.16:0,48,2113	0/0:11,0:11:30.10:0,30,1335	0/1:1,12:13:96.79:1015,0,97	0/0:27,0:27:81.21:0,81,3343	1/1:3,5:8:12.04:351,12,0	0/0:24,0:24:69.24:0,69,2955	0/0:19,0:19:54.19:0,54,2419	0/0:16,0:16:48.16:0,48,2146	0/0:18,0:18:54.19:0,54,2393	0/0:17,0:17:45.15:0,45,1808	0/0:23,0:23:66.21:0,66,2834	0/0:13,0:13:39.13:0,39,1765	0/0:23,0:23:63.21:0,63,2629	0/0:16,0:16:48.15:0,48,2055	0/0:15,0:15:45.15:0,45,2038
chr10	57396954	.	AG	A	2136.35	PASS	AB=0.966;AC=30;AF=0.536;AN=56;BaseQRankSum=11.941;DP=617;FS=9.491;HRun=1;HaplotypeScore=96.2135;InbreedingCoeff=0.3100;MQ=62.83;MQ0=9;MQRankSum=-0.986;QD=4.32;ReadPosRankSum=4.851;VQSLOD=-0.0209;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:37,0:37:51.83:310,52,0	1/1:3,0:3:6.19:30,6,0	0/1:36,4:12:3.46:3,0,102	0/1:30,4:11:1.78:2,0,98	1/1:30,0:30:74.73:396,75,0	0/0:26,0:25:73.06:0,73,727	0/0:10,0:10:30.03:0,30,319	1/1:18,0:18:12.38:146,12,0	1/1:18,1:18:25.46:116,25,0	0/1:21,1:22:17.85:78,0,18	0/1:28,0:28:11.89:89,0,12	0/0:16,0:16:44.86:0,45,412	0/0:14,0:14:24.55:0,25,233	0/0:16,0:16:44.92:0,45,455	1/1:18,0:18:3.25:57,3,0	0/1:20,0:20:6.10:97,0,6	1/1:28,0:28:55.34:254,55,0	0/1:25,0:25:58.54:88,0,59	0/1:28,1:29:9.48:119,0,9	0/1:29,0:28:26.62:110,0,27	1/1:13,0:13:18.13:64,18,0	0/0:8,0:8:23.26:0,23,228	0/0:16,0:16:44.07:0,44,426	0/0:17,0:17:38.35:0,38,346	1/1:20,0:20:9.61:73,10,0	0/1:31,1:32:27.26:125,0,27	0/1:23,1:24:16.07:81,0,16	1/1:23,1:24:11.48:91,11,0
chr10	57396955	.	GA	G	7420.11	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=4.481;DP=610;FS=4.078;HRun=10;HaplotypeScore=78.8872;InbreedingCoeff=0.9686;MQ=63.95;MQ0=8;MQRankSum=1.291;QD=17.88;ReadPosRankSum=1.984;VQSLOD=5.7241;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:37,0:37:38.42:381,38,0	1/1:3,0:3:6.68:34,7,0	0/0:37,0:12:6.07:0,6,165	0/0:33,1:12:20.30:0,20,183	1/1:28,1:29:69.73:424,70,0	0/0:26,0:25:69.19:0,69,817	0/0:10,0:10:27.08:0,27,326	1/1:16,2:18:37.90:284,38,0	1/1:3,15:18:33.04:317,33,0	1/1:5,17:22:51.07:491,51,0	1/1:4,23:27:63.09:604,63,0	0/0:16,0:16:44.66:0,45,470	0/0:14,0:14:35.79:0,36,374	0/0:16,0:16:42.12:0,42,493	1/1:2,16:18:39.06:376,39,0	1/1:6,15:21:54.08:521,54,0	1/1:29,0:29:39.25:247,39,0	1/1:8,18:25:23.98:357,24,0	1/1:8,21:29:65.58:600,66,0	1/1:6,22:27:59.99:564,60,0	1/1:2,10:12:27.01:251,27,0	0/0:8,0:8:21.05:0,21,244	0/0:17,0:17:45.10:0,45,517	0/0:17,0:17:30:0,30,329	1/1:3,17:20:45.01:424,45,0	1/1:7,25:32:72.11:693,72,0	1/1:5,17:22:32.96:314,33,0	1/1:7,17:24:57.01:538,57,0
chr10	57398458	.	GCGA	G	7317.64	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=18.976;DP=622;FS=1.006;HRun=0;HaplotypeScore=126.1723;InbreedingCoeff=0.9909;MQ=95.41;MQ0=0;MQRankSum=-5.879;QD=36.77;ReadPosRankSum=1.627;VQSLOD=5.7782;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,123,2956	0/0:3,0:3:9.03:0,9,222	0/0:32,0:32:93.32:0,93,2187	0/0:28,0:28:77.81:0,78,1614	0/0:14,0:14:42.14:0,42,1000	0/0:25,0:25:75.24:0,75,1799	0/0:36,0:36:99:0,105,2534	0/0:29,0:29:87.30:0,87,2134	1/1:2,14:16:48:564,48,0	1/1:2,14:16:42.99:600,43,0	1/1:1,8:9:21.07:289,21,0	0/0:27,0:27:81.26:0,81,1932	0/0:22,0:22:66.23:0,66,1575	0/0:23,0:23:69.24:0,69,1700	1/1:2,30:33:99:1322,99,0	0/0:26,0:26:78.27:0,78,1922	0/0:30,0:30:90.31:0,90,2185	0/0:24,0:24:72.25:0,72,1752	1/1:1,13:14:39.12:536,39,0	1/1:0,12:12:36.08:415,36,0	1/1:2,30:32:85.30:1085,85,0	0/0:17,0:17:48.16:0,48,1141	0/0:16,0:16:48.16:0,48,1181	0/0:28,0:28:84.29:0,84,2057	1/1:1,20:21:63.14:744,63,0	1/1:2,14:16:48.10:636,48,0	1/1:2,19:21:63.14:812,63,0	1/1:0,9:9:27.08:315,27,0
chr10	57398462	.	T	TA	6183.50	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=19.170;DP=636;FS=2.621;HRun=1;HaplotypeScore=107.9573;InbreedingCoeff=0.9910;MQ=91.70;MQ0=0;MQRankSum=-7.275;QD=29.45;ReadPosRankSum=0.624;VQSLOD=4.6676;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,129,1764	0/0:3,0:3:9.03:0,9,126	0/0:28,0:28:84.25:0,84,1132	0/0:25,0:26:69.22:0,69,947	0/0:15,0:15:45.13:0,45,611	0/0:25,0:25:75.24:0,75,1032	0/0:34,0:34:96.32:0,96,1342	0/0:31,0:31:93.31:0,93,1299	1/1:2,14:16:47.89:453,48,0	1/1:3,14:17:50.81:563,51,0	1/1:3,8:11:21.04:233,21,0	0/0:26,0:26:78.26:0,78,1090	0/0:23,0:23:69.21:0,69,946	0/0:24,0:24:72.23:0,72,989	1/1:3,30:33:95.47:1065,95,0	0/0:27,0:27:78.26:0,78,1091	0/0:30,0:30:90.25:0,90,1216	0/0:24,0:24:69.23:0,69,963	1/1:1,13:14:42.06:476,42,0	1/1:0,12:12:35.94:335,36,0	1/1:2,30:32:84.62:905,85,0	0/0:16,0:16:45.15:0,45,629	0/0:18,0:18:51.17:0,51,712	0/0:30,0:30:90.26:0,90,1235	1/1:3,20:23:65.96:639,66,0	1/1:6,14:20:56.79:581,57,0	1/1:2,19:22:65.30:667,65,0	1/1:1,9:10:29.98:269,30,0
chr10	57398730	.	A	AG	19022.59	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-16.265;DP=739;FS=6.965;HRun=1;HaplotypeScore=68.4992;InbreedingCoeff=0.9998;MQ=79.75;MQ0=0;MQRankSum=-2.196;QD=39.30;ReadPosRankSum=1.666;VQSLOD=5.4942;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,40:40:99:1753,117,0	1/1:0,10:10:30.10:449,30,0	0/0:21,0:21:58.59:0,59,674	0/0:20,0:20:46.49:0,46,510	1/1:0,25:25:69.17:1006,69,0	0/0:25,0:25:75.23:0,75,960	0/0:43,0:43:99:0,123,1552	1/1:1,26:27:75.13:991,75,0	1/1:2,27:29:78.26:1169,78,0	1/1:1,21:22:57.18:832,57,0	1/1:0,18:18:48.16:719,48,0	0/0:31,0:31:93.30:0,93,1207	0/0:26,0:26:78.24:0,78,997	0/0:27,0:27:81.26:0,81,1051	1/1:1,27:28:72.24:1079,72,0	1/1:0,29:29:72.24:1079,72,0	1/1:0,46:46:99:1798,120,0	1/1:0,30:30:81.27:1214,81,0	1/1:0,16:16:48.16:718,48,0	1/1:0,19:19:48.16:718,48,0	1/1:2,71:73:99:2742,184,0	0/0:15,0:15:45.09:0,45,545	0/0:18,0:18:54.16:0,54,678	0/0:29,0:29:81.21:0,81,1018	1/1:0,15:15:39.13:584,39,0	1/1:2,25:27:78.16:1080,78,0	1/1:1,19:20:48.12:687,48,0	1/1:0,10:10:27.09:404,27,0
chr10	57399132	.	GT	G	4154.97	PASS	AB=0.810;AC=22;AF=0.393;AN=56;BaseQRankSum=10.598;DP=555;FS=12.880;HRun=9;HaplotypeScore=57.1544;InbreedingCoeff=0.8254;MQ=70.93;MQ0=2;MQRankSum=2.164;QD=20.37;ReadPosRankSum=3.584;VQSLOD=3.2861;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:38:93.12:0,93,1031	0/0:9,0:9:27.08:0,27,312	0/0:14,0:14:30.04:0,30,324	0/1:9,0:8:21.38:21,0,27	0/0:30,1:31:65.79:0,66,993	0/0:27,0:27:72.21:0,72,829	0/0:14,0:14:36.11:0,36,414	0/0:44,0:44:99:0,111,1245	1/1:3,17:19:36.08:424,36,0	1/1:1,13:14:39.01:352,39,0	1/1:2,18:20:51.01:467,51,0	0/0:21,0:21:42.07:0,42,469	0/0:25,0:24:69.15:0,69,771	0/0:12,0:12:30.08:0,30,336	1/1:0,13:13:33.02:302,33,0	0/0:29,0:29:75.18:0,75,846	0/0:24,0:25:56.83:0,57,614	0/0:20,0:20:54.14:0,54,612	0/1:7,11:18:19.02:258,0,19	1/1:2,17:19:51.02:467,51,0	1/1:5,11:16:24.01:220,24,0	0/0:15,0:15:39.12:0,39,450	0/0:11,0:13:38.77:0,39,399	0/0:12,1:13:2.62:0,3,284	1/1:1,18:19:45.02:412,45,0	1/1:1,23:24:63.01:573,63,0	1/1:3,17:20:48.03:439,48,0	1/1:4,8:12:24:220,24,0
chr10	57435945	.	A	AACAC	1317.94	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=4.260;DP=736;FS=16.821;HRun=0;HaplotypeScore=164.9632;InbreedingCoeff=0.9940;MQ=68.50;MQ0=9;MQRankSum=-0.637;QD=22.72;ReadPosRankSum=-1.742;VQSLOD=2.1692;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:34,8:43:42.78:1022,43,0	0/0:9,0:9:27.09:0,27,503	0/0:32,0:24:67.71:0,68,1102	0/0:36,0:25:66.86:0,67,1060	1/1:7,6:14:23.33:417,23,0	0/0:22,0:21:54.17:0,54,955	0/0:30,0:30:86.99:0,87,1525	0/0:33,0:32:96.24:0,96,1608	0/0:28,0:28:53.93:0,54,1085	0/0:32,0:30:76.51:0,77,1313	0/0:17,0:17:45.13:0,45,778	0/0:36,0:36:99:0,105,1878	0/0:27,0:27:72.24:0,72,1342	0/0:27,0:27:75.23:0,75,1312	0/0:29,0:29:81.28:0,81,1511	0/0:41,0:41:99:0,118,2185	0/0:23,0:23:61.67:0,62,971	0/0:24,0:24:62.80:0,63,1123	0/0:22,0:21:57.12:0,57,996	0/0:20,0:20:57.20:0,57,1071	0/0:37,0:37:99:0,102,1859	0/0:25,0:25:72.23:0,72,1270	0/0:18,0:18:54.19:0,54,1040	0/0:35,0:35:96.25:0,96,1728	0/0:13,0:13:39.13:0,39,759	0/0:28,0:28:75.26:0,75,1376	0/0:26,0:26:66.21:0,66,1145	0/0:8,0:8:18.06:0,18,355
chr10	57435972	.	ACT	A	2710.82	PASS	AB=0.984;AC=23;AF=0.411;AN=56;BaseQRankSum=16.289;DP=817;FS=1.293;HRun=0;HaplotypeScore=149.1268;InbreedingCoeff=0.6160;MQ=55.12;MQ0=11;MQRankSum=-1.290;QD=6.71;ReadPosRankSum=4.409;VQSLOD=3.4785;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:48,0:47:3.66:4,0,639	0/0:7,0:7:21:0,21,248	0/0:34,0:18:0.10:0,0,338	0/1:33,0:16:26.01:26,0,205	0/0:25,0:24:37.27:0,37,432	0/0:21,0:20:33.27:0,33,633	0/0:31,0:29:63:0,63,905	0/0:40,0:36:13.85:0,14,1048	1/1:32,0:32:18.42:209,18,0	1/1:36,0:34:7.87:326,8,0	1/1:17,1:18:47.74:253,48,0	0/0:36,0:36:83.32:0,83,1345	0/0:28,1:29:60.01:0,60,1126	0/0:26,0:26:44.81:0,45,942	1/1:30,0:30:52.53:390,53,0	0/0:41,0:41:97.28:0,97,1625	0/0:34,0:32:52.77:0,53,807	0/0:25,0:25:61.95:0,62,968	0/1:28,0:25:80.59:130,0,81	1/1:22,0:22:15.23:231,15,0	1/1:49,0:49:63.57:554,64,0	0/0:23,0:23:52.69:0,53,923	0/1:21,1:22:10.07:10,0,789	0/0:41,0:41:97.79:0,98,1662	1/1:17,0:17:20.92:191,21,0	0/1:26,1:27:0.64:261,0,1	1/1:28,2:30:16.19:260,16,0	1/1:12,0:12:3.49:67,3,0
chr10	57435974	.	TCA	T	8072.60	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=6.278;DP=817;FS=2.154;HRun=0;HaplotypeScore=133.6448;InbreedingCoeff=0.9710;MQ=55.80;MQ0=12;MQRankSum=-0.824;QD=26.91;ReadPosRankSum=2.901;VQSLOD=6.3309;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:45:77.22:0,77,1165	0/0:8,0:8:15.04:0,15,223	0/0:37,0:20:36.01:0,36,483	0/0:31,0:15:30.08:0,30,354	0/0:24,0:23:35.90:0,36,711	0/0:20,0:19:43.55:0,44,649	0/0:31,0:29:63.97:0,64,977	0/0:39,0:35:50.50:0,51,1176	1/1:1,30:32:41.34:516,41,0	1/1:5,31:34:79.18:1042,79,0	1/1:10,8:18:45.58:572,46,0	0/0:37,0:37:98.63:0,99,1452	0/0:30,0:30:61.23:0,61,1065	0/0:26,0:26:62.54:0,63,1032	1/1:14,17:31:78.25:1022,78,0	0/0:41,0:41:99:0,102,1576	0/0:33,0:31:50.47:0,50,983	0/0:25,0:25:69.07:0,69,1037	1/1:11,16:24:40.80:489,41,0	1/1:12,11:23:60.19:771,60,0	1/1:27,21:48:99:1472,121,0	0/0:24,0:24:66.07:0,66,1040	0/0:24,1:25:3.14:0,3,827	0/0:39,0:39:89.43:0,89,1696	1/1:10,7:17:48.15:612,48,0	1/1:17,10:27:69.20:884,69,0	1/1:5,24:29:39.12:496,39,0	1/1:1,11:12:15.05:196,15,0
chr10	57436082	.	T	TAC	1919.28	PASS	AB=0.972;AC=16;AF=0.286;AN=56;BaseQRankSum=14.380;DP=767;FS=6.923;HRun=0;HaplotypeScore=144.3933;InbreedingCoeff=0.0651;MQ=61.39;MQ0=22;MQRankSum=-2.253;QD=5.38;ReadPosRankSum=2.181;VQSLOD=2.8875;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:39,0:38:39.48:39,0,174	1/1:1,8:9:14.51:247,15,0	0/0:48,0:21:47.36:0,47,554	0/0:31,0:11:15.05:0,15,216	0/1:25,0:24:0.78:43,0,1	0/0:29,0:29:84.27:0,84,1257	0/0:26,0:25:72.24:0,72,1085	0/1:27,26:46:0.61:999,0,1	0/1:24,0:24:91.34:91,0,112	0/1:28,0:28:12.41:12,0,364	0/1:14,0:14:9.24:9,0,118	0/0:31,0:31:93.22:0,93,1298	0/0:31,0:31:93.27:0,93,1385	0/0:22,0:22:66.18:0,66,955	0/1:18,0:16:14.17:14,0,38	0/0:36,0:36:99:0,102,1533	1/1:8,9:16:13.55:446,14,0	0/0:31,0:31:90.28:0,90,1341	0/0:25,0:22:6.93:0,7,266	0/1:28,0:26:74.91:75,0,93	0/1:51,0:49:28.29:28,0,216	0/0:23,0:23:69.22:0,69,1033	0/0:21,0:21:57.19:0,57,872	0/0:30,0:30:87.28:0,87,1295	0/1:23,0:23:11.24:11,0,120	0/0:24,0:23:5.68:0,6,115	0/1:22,0:21:63.40:63,0,88	0/1:5,0:5:2.18:2,0,37
chr10	57436084	.	T	TAC	12345.96	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=-1.984;DP=766;FS=4.872;HRun=0;HaplotypeScore=112.8328;InbreedingCoeff=0.9720;MQ=60.55;MQ0=21;MQRankSum=-0.572;QD=30.19;ReadPosRankSum=1.255;VQSLOD=6.8666;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,31:38:69.24:1140,69,0	1/1:9,0:9:15.05:247,15,0	0/0:46,0:19:31.23:0,31,330	0/0:27,0:10:14.22:0,14,132	1/1:0,23:23:51.17:838,51,0	0/0:29,0:29:75.18:0,75,921	0/0:26,0:25:66.10:0,66,789	1/1:57,0:49:51.60:1158,52,0	1/1:6,18:24:56.16:947,56,0	1/1:10,18:28:51.17:852,51,0	1/1:3,11:14:30.10:483,30,0	0/0:29,0:29:69.20:0,69,850	0/0:32,0:32:87.26:0,87,1087	0/0:22,0:22:54.16:0,54,672	1/1:6,13:17:36.01:734,36,0	0/0:34,0:34:93.25:0,93,1131	1/1:17,0:16:4.59:417,5,0	0/0:34,0:34:84.17:0,84,1003	1/1:7,17:21:38.94:557,39,0	1/1:4,25:27:63.21:1029,63,0	1/1:12,38:48:65.56:1110,66,0	0/0:23,0:23:69.19:0,69,849	0/0:20,0:20:60.18:0,60,749	0/0:30,0:30:69.19:0,69,861	1/1:3,20:23:42.14:700,42,0	1/1:4,21:24:63.17:1023,63,0	1/1:7,15:21:57.18:910,57,0	1/1:1,4:5:12.04:201,12,0
chr10	57436118	.	TATAC	T	1166.85	PASS	AB=0.761;AC=10;AF=0.179;AN=56;BaseQRankSum=12.839;DP=743;FS=8.793;HRun=0;HaplotypeScore=215.2730;InbreedingCoeff=-0.2136;MQ=52.60;MQ0=6;MQRankSum=-11.296;QD=5.64;ReadPosRankSum=-5.337;VQSLOD=0.0234;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:36:83.80:0,84,2110	0/0:12,0:12:30.05:0,30,764	0/0:43,0:22:45.05:0,45,1210	0/0:29,0:12:33.11:0,33,792	0/0:33,0:32:93.28:0,93,2349	0/0:19,0:19:54.15:0,54,1315	0/0:19,0:18:52.05:0,52,1302	0/0:41,0:39:53.70:0,54,2446	0/1:15,9:24:99:159,0,759	0/1:21,3:24:36.60:37,0,1319	0/1:9,7:16:99:124,0,544	0/0:29,0:29:87.27:0,87,2263	0/0:37,0:37:99:0,111,2688	0/0:25,0:25:75.24:0,75,1988	0/1:9,9:18:99:165,0,563	0/0:38,0:38:99:0,111,2989	0/0:22,0:22:47.72:0,48,1287	0/0:32,0:32:90.28:0,90,2346	0/1:20,3:17:94.97:95,0,807	0/1:22,5:27:7.77:8,0,1095	0/0:33,0:32:52.82:0,53,1187	0/0:30,0:30:90.28:0,90,2411	0/0:26,0:26:78.10:0,78,2041	0/0:29,0:29:74.82:0,75,1928	0/1:11,7:18:83.11:83,0,571	0/1:17,5:22:99:225,0,1072	0/1:16,10:26:99:282,0,927	0/1:4,5:9:99:134,0,178
chr10	57436142	.	TATACACACACAA	T	6834.58	PASS	AB=0.823;AC=18;AF=0.321;AN=56;BaseQRankSum=12.499;DP=695;FS=21.228;HRun=0;HaplotypeScore=275.5146;InbreedingCoeff=0.5083;MQ=53.58;MQ0=6;MQRankSum=-12.538;QD=32.86;ReadPosRankSum=1.973;VQSLOD=2.9093;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:34:78.63:0,79,3659	0/0:17,0:17:45.63:0,46,2090	0/0:45,0:19:34.85:0,35,772	0/0:38,0:20:50.49:0,50,1328	0/0:31,0:30:75.20:0,75,3556	0/0:20,0:20:60.21:0,60,2934	0/0:16,0:16:33.11:0,33,1597	0/0:41,0:39:93.32:0,93,4083	1/1:7,9:16:27.09:715,27,0	0/1:16,4:20:96.72:434,0,97	0/1:8,8:16:15.56:703,0,16	0/0:35,0:35:93.31:0,93,5001	0/0:28,0:28:78.27:0,78,3952	0/0:27,0:27:72.25:0,72,3646	1/1:3,17:20:33.11:841,33,0	0/0:41,0:41:99:0,114,5889	0/1:19,0:20:51.41:51,0,1631	0/0:30,0:30:78.24:0,78,3801	0/1:10,4:10:50.37:469,0,50	1/1:12,6:18:2.97:429,3,0	0/1:24,0:23:2.78:340,0,3	0/0:28,0:28:72.25:0,72,3715	0/0:30,0:30:81.28:0,81,4167	0/0:25,0:25:63.22:0,63,3048	1/1:3,8:11:21.07:517,21,0	0/1:7,5:12:32.11:620,0,32	1/1:9,22:31:28.40:1292,28,0	1/1:1,5:6:15.05:424,15,0
chr10	57436154	.	A	AAT	4801.58	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=10.747;DP=644;FS=17.262;HRun=0;HaplotypeScore=138.8196;InbreedingCoeff=0.9969;MQ=58.27;MQ0=8;MQRankSum=-10.239;QD=33.58;ReadPosRankSum=-1.004;VQSLOD=5.3955;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:34:75.14:0,75,1027	0/0:19,0:19:42.08:0,42,563	0/0:38,0:13:24.45:0,24,315	0/0:42,0:27:49.54:0,50,631	0/0:28,0:27:72.14:0,72,954	0/0:24,0:24:66.17:0,66,902	0/0:12,0:12:36.11:0,36,499	0/0:39,0:37:99:0,108,1436	1/1:11,3:14:39.13:634,39,0	1/1:12,2:13:20.58:402,21,0	1/1:12,1:13:30.09:419,30,0	0/0:30,0:30:90.30:0,90,1287	0/0:29,0:29:87.22:0,87,1146	0/0:28,0:28:78.24:0,78,1089	1/1:17,0:17:33.10:463,33,0	0/0:41,0:41:99:0,108,1493	0/0:24,0:24:43.97:0,44,551	0/0:29,0:30:86.52:0,87,1076	1/1:9,0:8:21.06:316,21,0	1/1:9,1:10:24.08:364,24,0	1/1:4,6:10:21.06:279,21,0	0/0:24,0:24:66.21:0,66,924	0/0:28,0:28:81.24:0,81,1119	0/0:29,0:29:75.60:0,76,940	1/1:10,0:10:24.08:330,24,0	1/1:12,2:14:36.12:566,36,0	1/1:22,2:24:45.14:659,45,0	1/1:8,0:8:24.08:370,24,0
chr10	57436536	.	T	TTG	2894.17	PASS	AB=0.895;AC=20;AF=0.357;AN=56;BaseQRankSum=-4.136;DP=431;FS=3.290;HRun=0;HaplotypeScore=60.6519;InbreedingCoeff=0.7665;MQ=56.79;MQ0=39;MQRankSum=2.055;QD=17.13;ReadPosRankSum=3.930;VQSLOD=3.4116;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:28:50.82:0,51,435	0/0:5,0:4:9.86:0,10,90	0/1:22,0:8:4.16:4,0,39	0/0:14,0:7:2.51:0,3,45	0/0:18,0:18:50.62:0,51,406	0/0:19,0:16:37.22:0,37,359	0/0:17,0:15:37.03:0,37,289	0/0:25,0:23:48.35:0,48,385	1/1:6,6:12:22.23:299,22,0	1/1:13,5:15:41.69:419,42,0	0/1:11,4:12:13.11:179,0,13	0/0:10,0:9:23.95:0,24,244	0/0:9,0:9:26.84:0,27,244	0/0:10,0:9:17.96:0,18,177	1/1:9,7:14:29.40:397,29,0	0/0:16,0:14:30.02:0,30,189	0/0:30,0:27:71.58:0,72,620	0/0:9,0:7:17.96:0,18,173	1/1:16,7:18:26.99:420,27,0	1/1:5,2:5:12:141,12,0	1/1:8,4:12:10.93:246,11,0	0/0:7,0:7:14.24:0,14,118	0/0:11,0:11:32.82:0,33,273	0/0:25,0:22:39.32:0,39,379	1/1:5,1:4:1.83:73,2,0	1/1:15,8:21:33.14:531,33,0	1/1:7,7:15:32.86:388,33,0	0/0:6,0:4:4.41:0,4,16
chr10	57436537	.	T	TG	989.44	PASS	AB=0.983;AC=14;AF=0.250;AN=56;BaseQRankSum=1.471;DP=427;FS=7.789;HRun=0;HaplotypeScore=59.9935;InbreedingCoeff=0.3677;MQ=55.36;MQ0=39;MQRankSum=3.277;QD=6.78;ReadPosRankSum=4.277;VQSLOD=2.5600;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:28:50.76:0,51,401	0/0:5,0:4:11.95:0,12,108	0/0:22,0:8:1.64:0,2,42	0/0:13,0:6:3.49:0,3,54	0/0:18,0:18:50.63:0,51,392	0/0:18,0:15:37.18:0,37,334	0/0:17,0:15:37.01:0,37,274	0/0:26,0:24:50.73:0,51,389	0/1:13,0:13:10.20:88,0,10	1/1:17,0:14:0.69:133,1,0	0/1:14,1:12:5.55:94,0,6	0/0:10,0:9:23.93:0,24,214	0/0:9,0:9:26.78:0,27,234	0/0:9,0:8:17.89:0,18,168	0/1:16,0:14:3.04:133,0,3	0/0:16,0:14:27.33:0,27,138	0/0:30,0:27:70.39:0,70,556	0/0:9,0:7:17.96:0,18,169	1/1:20,3:18:27.53:239,28,0	1/1:7,0:5:1.26:29,1,0	1/1:11,0:11:9.88:102,10,0	0/0:7,0:7:14.28:0,14,113	0/0:11,0:11:29.87:0,30,254	0/0:24,0:21:38.26:0,38,354	0/1:6,0:4:1.91:2,0,21	0/1:22,1:21:11.14:202,0,11	0/1:15,0:15:7.30:122,0,7	0/0:6,0:4:4.79:0,5,26
chr10	57436551	.	TTC	T	422.62	PASS	AB=0.986;AC=18;AF=0.321;AN=56;BaseQRankSum=4.637;DP=370;FS=10.009;HRun=0;HaplotypeScore=59.9664;InbreedingCoeff=-0.2569;MQ=43.11;MQ0=38;MQRankSum=-1.575;QD=1.75;ReadPosRankSum=1.427;VQSLOD=0.4573;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:24:7.35:7,0,294	0/0:4,0:3:3.27:0,3,17	0/1:5,0:3:0.13:0,0,0	0/0:4,0:2:2.65:0,3,30	0/0:17,0:17:22.76:0,23,352	0/0:17,0:14:18.64:0,19,271	0/0:14,0:11:29.73:0,30,274	0/1:23,0:21:3.78:4,0,266	0/1:11,1:12:38.67:46,0,39	0/1:17,0:13:45.17:45,0,51	0/1:12,0:9:17.98:18,0,44	0/0:9,0:8:19.63:0,20,190	0/1:6,0:6:1:1,0,27	0/0:9,0:8:17.33:0,17,153	0/1:16,2:16:38.35:98,0,38	0/0:17,0:15:22.96:0,23,464	0/1:25,0:22:70.74:71,0,74	0/1:11,0:9:20.97:21,0,136	0/1:25,0:20:23.57:24,0,104	0/1:8,0:5:14.88:15,0,16	0/0:8,0:8:11.21:0,11,78	0/1:5,0:5:7.96:8,0,61	0/0:5,0:5:13.27:0,13,143	0/0:25,0:22:24.90:0,25,365	0/1:7,0:5:6.60:7,0,54	0/1:19,1:18:99:101,0,113	0/1:14,0:14:17.09:65,0,17	1/1:5,1:4:5.50:41,6,0
chr10	57436635	.	CG	C	14924.85	PASS	AB=0.750;AC=53;AF=0.946;AN=56;BaseQRankSum=-4.042;DP=427;FS=2.020;HRun=1;HaplotypeScore=48.1948;InbreedingCoeff=0.5158;MQ=59.77;MQ0=6;MQRankSum=0.861;QD=36.31;ReadPosRankSum=2.250;VQSLOD=5.0101;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,35:35:99:1425,102,0	1/1:0,3:3:5.60:83,6,0	0/1:8,4:6:19.22:111,0,19	0/0:16,0:5:7.99:0,8,57	1/1:0,10:10:18.06:251,18,0	1/1:0,15:15:42.14:586,42,0	1/1:0,15:14:42.14:586,42,0	1/1:2,11:13:39.09:507,39,0	1/1:0,16:16:42.14:586,42,0	1/1:0,20:20:60.16:802,60,0	1/1:0,6:6:15.05:209,15,0	1/1:0,18:18:51.17:712,51,0	1/1:0,16:16:42.14:586,42,0	1/1:1,14:15:42.14:586,42,0	1/1:0,17:17:48.16:670,48,0	1/1:0,20:20:60.20:837,60,0	1/1:1,26:27:68.64:940,69,0	1/1:0,16:16:39.13:545,39,0	1/1:0,12:12:33.11:460,33,0	1/1:0,9:8:18.06:251,18,0	1/1:0,23:23:60.20:838,60,0	1/1:0,7:7:21.02:270,21,0	1/1:0,8:8:21.07:293,21,0	1/1:0,22:22:54.11:731,54,0	1/1:0,7:7:15.05:210,15,0	1/1:0,23:23:69.21:945,69,0	1/1:0,16:16:36.12:501,36,0	1/1:0,10:10:30.09:404,30,0
chr10	57437250	.	A	AC	7946.09	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-13.301;DP=658;FS=10.323;HRun=3;HaplotypeScore=61.2164;InbreedingCoeff=0.9990;MQ=82.33;MQ0=0;MQRankSum=-2.179;QD=36.12;ReadPosRankSum=1.338;VQSLOD=4.9792;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,102,1192	0/0:8,0:8:23.77:0,24,247	0/0:20,0:20:54.11:0,54,610	0/0:26,0:26:51.63:0,52,615	0/0:21,0:21:54.12:0,54,624	0/0:25,0:25:69.21:0,69,827	0/0:40,0:40:99:0,108,1282	0/0:27,0:27:72.06:0,72,776	1/1:2,24:26:66.22:923,66,0	1/1:2,17:19:48.11:632,48,0	1/1:0,10:10:27.09:374,27,0	0/0:36,0:36:93.27:0,93,1105	0/0:25,0:25:69.20:0,69,816	0/0:11,0:11:30.09:0,30,360	1/1:3,26:29:69.23:964,69,0	0/0:27,0:27:72.14:0,72,809	0/0:38,0:38:99:0,108,1283	0/0:23,0:23:63.16:0,63,739	1/1:1,19:20:57.16:761,57,0	1/1:0,12:12:27.05:348,27,0	1/1:0,32:32:90.30:1257,90,0	0/0:34,0:34:90.16:0,90,1047	0/0:9,0:9:27.08:0,27,323	0/0:30,0:29:81.09:0,81,910	1/1:0,17:17:45.15:628,45,0	1/1:1,27:28:81.25:1110,81,0	1/1:1,17:18:42.14:587,42,0	1/1:1,8:9:27.08:363,27,0
chr10	57438048	.	TG	T	3922.54	PASS	AB=0.881;AC=31;AF=0.554;AN=56;BaseQRankSum=4.479;DP=566;FS=4.764;HRun=11;HaplotypeScore=70.1236;InbreedingCoeff=0.4527;MQ=71.34;MQ0=0;MQRankSum=-0.742;QD=10.11;ReadPosRankSum=2.922;VQSLOD=3.0737;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:37:11.64:0,12,80	0/0:4,0:4:7.25:0,7,60	0/0:13,0:13:2.44:0,2,84	0/1:11,2:12:25.71:26,0,103	0/0:13,0:14:8.63:0,9,76	0/1:20,3:23:13.26:13,0,257	0/1:29,3:32:34.07:34,0,437	0/0:23,0:23:8.98:0,9,84	1/1:6,19:25:59.91:493,60,0	1/1:12,9:21:17.94:148,18,0	1/1:3,2:5:5.99:49,6,0	0/0:24,0:24:33.04:0,33,323	0/0:17,0:17:24.05:0,24,249	0/0:22,0:22:21.02:0,21,207	1/1:5,23:28:65.92:542,66,0	1/1:3,11:14:26.96:222,27,0	0/1:38,2:40:4.74:5,0,556	1/1:6,20:26:59.91:492,60,0	1/1:7,7:14:20.95:172,21,0	1/1:4,12:18:37.01:283,37,0	1/1:15,24:42:72.01:559,72,0	0/1:11,1:12:18.63:19,0,26	0/1:12,0:12:7.19:7,0,98	0/0:24,0:24:30.06:0,30,312	1/1:7,12:19:19.28:276,19,0	1/1:8,9:17:29.95:245,30,0	1/1:4,8:12:20.97:172,21,0	0/1:6,9:15:13.91:167,0,14
chr10	57438352	.	CCCTT	C	5049.98	PASS	AB=1.000;AC=35;AF=0.700;AN=50;BaseQRankSum=10.907;DP=621;FS=1.760;HRun=0;HaplotypeScore=99.4727;InbreedingCoeff=0.7633;MQ=54.29;MQ0=11;MQRankSum=0.292;QD=13.02;ReadPosRankSum=0.554;VQSLOD=4.3502;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:40:6.01:56,6,0	1/1:6,0:5:3.01:40,3,0	./.	./.	1/1:8,0:13:3:28,3,0	0/0:16,0:16:24.04:0,24,512	0/0:30,0:29:30.10:0,30,703	./.	1/1:12,14:26:36.12:555,36,0	1/1:15,13:28:36.12:552,36,0	1/1:6,8:13:15.01:205,15,0	0/0:20,0:20:30.10:0,30,702	0/1:20,0:20:24.98:25,0,387	0/0:17,0:17:27.09:0,27,613	1/1:13,14:27:23.98:370,24,0	1/1:18,1:33:42.05:409,42,0	1/1:13,0:19:9.01:84,9,0	1/1:17,0:21:2.61:27,3,0	1/1:14,6:18:15.05:231,15,0	1/1:8,6:14:18.06:276,18,0	1/1:16,22:37:48.16:739,48,0	0/0:17,0:17:27.09:0,27,577	0/0:15,0:15:30.10:0,30,699	0/0:40,0:40:60.21:0,60,1393	1/1:5,15:19:33.11:508,33,0	1/1:13,8:21:24.06:345,24,0	1/1:8,13:21:33.11:508,33,0	1/1:5,2:7:6.02:92,6,0
chr10	57438617	.	CTG	C	808.56	PASS	AB=0.849;AC=23;AF=0.442;AN=52;BaseQRankSum=6.052;DP=589;FS=29.520;HRun=0;HaplotypeScore=84.9817;InbreedingCoeff=0.1924;MQ=68.65;MQ0=6;MQRankSum=-0.559;QD=2.28;ReadPosRankSum=1.016;VQSLOD=-0.0845;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:40:5.68:28,6,0	0/0:4,0:4:7.56:0,8,61	0/0:28,0:17:0:0,0,0	./.	1/1:9,0:23:11.36:56,11,0	1/1:15,0:21:17.20:95,17,0	0/1:30,3:34:37.66:38,0,238	0/0:23,0:23:2.97:0,3,20	0/1:9,0:10:2.08:2,0,121	1/1:20,1:21:7.91:71,8,0	1/1:9,1:14:8.69:60,9,0	0/0:17,0:17:20.96:0,21,239	0/1:13,3:17:5.27:5,0,218	0/0:19,0:21:1.65:0,2,321	1/1:13,6:19:12.03:129,12,0	0/1:22,1:23:40.32:40,0,180	0/0:25,0:33:18.49:0,18,193	0/1:18,0:19:6.92:7,0,17	./.	0/1:15,6:22:10.54:37,0,11	0/1:29,11:40:4.95:85,0,5	0/1:16,3:19:14.49:14,0,199	0/0:15,0:15:6.77:0,7,93	0/0:26,0:27:15.91:0,16,313	0/0:13,0:13:21.04:0,21,251	0/0:12,0:12:2.37:0,2,8	0/1:15,11:27:55.23:239,0,55	1/1:1,3:4:6.02:64,6,0
chr10	57438876	.	AGG	A	4978.46	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=13.249;DP=735;FS=1.675;HRun=3;HaplotypeScore=88.9960;InbreedingCoeff=0.9955;MQ=86.01;MQ0=0;MQRankSum=-2.041;QD=41.14;ReadPosRankSum=2.627;VQSLOD=4.5096;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,40:40:99:1562,102,0	0/0:5,0:5:15.05:0,15,290	0/0:26,0:26:78.27:0,78,1435	0/0:33,0:33:87.28:0,87,1580	1/1:0,15:15:45.08:639,45,0	0/0:26,0:26:72.25:0,72,1390	0/0:28,0:28:84.29:0,84,1623	0/0:22,0:22:66.22:0,66,1245	0/0:25,0:25:72.25:0,72,1381	0/0:28,0:28:84.28:0,84,1576	0/0:12,0:12:36.12:0,36,693	0/0:24,0:24:72.25:0,72,1391	0/0:29,0:29:87.28:0,87,1636	0/0:29,0:29:84.29:0,84,1623	0/0:38,0:38:99:0,111,2121	1/1:0,45:45:99:1884,123,0	0/0:30,0:30:84.29:0,84,1623	1/1:0,21:21:60.16:893,60,0	0/0:33,0:32:99:0,99,1874	0/0:13,0:13:39.13:0,39,748	0/0:45,0:45:99:0,135,2568	0/0:21,0:21:63.22:0,63,1211	0/0:19,0:19:54.19:0,54,1037	0/0:29,0:29:84.24:0,84,1561	0/0:19,0:19:57.20:0,57,1101	0/0:31,0:31:87.30:0,87,1666	0/0:36,0:36:99:0,105,1997	0/0:13,0:13:39.13:0,39,753
chr10	57439077	.	T	TTTTGTTTG	2629.47	PASS	AB=0.589;AC=4;AF=0.071;AN=56;BaseQRankSum=4.809;DP=731;FS=2.078;HRun=0;HaplotypeScore=181.9168;InbreedingCoeff=0.3868;MQ=61.84;MQ0=2;MQRankSum=-4.674;QD=29.88;ReadPosRankSum=-1.698;VQSLOD=2.7990;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:93.24:0,93,2059	0/0:8,0:8:15.04:0,15,330	0/0:20,0:15:3.88:0,4,117	0/0:23,0:17:7.44:0,7,55	0/0:25,0:25:57.20:0,57,1315	0/0:19,0:19:45.14:0,45,1070	0/0:22,0:22:36.12:0,36,879	0/0:40,0:40:59.19:0,59,1028	0/0:18,0:18:39.09:0,39,929	0/0:37,0:37:54.18:0,54,1287	0/0:25,0:25:40.45:0,40,1057	0/0:18,0:18:39.13:0,39,975	0/0:26,0:26:54.18:0,54,1283	0/0:26,0:26:51.15:0,51,1141	0/0:28,0:28:45.13:0,45,1005	0/1:11,0:33:15.90:396,0,16	0/0:30,0:30:69.17:0,69,1525	1/1:9,10:22:12.04:486,12,0	0/0:26,0:26:23.52:0,24,436	0/0:31,0:31:57.16:0,57,1241	0/0:24,0:24:45.12:0,45,955	0/0:18,0:18:42.14:0,42,976	0/0:33,0:33:75.26:0,75,1893	0/1:9,19:33:24.56:1858,0,25	0/0:25,0:25:51.17:0,51,1179	0/0:33,0:33:54.17:0,54,1259	0/0:37,0:37:75.25:0,75,1812	0/0:11,0:11:24.07:0,24,555
chr10	57439516	.	AAAAG	A	585.10	PASS	AB=0.972;AC=9;AF=0.161;AN=56;BaseQRankSum=5.845;DP=543;FS=16.854;HRun=0;HaplotypeScore=100.6167;InbreedingCoeff=0.0196;MQ=60.21;MQ0=2;MQRankSum=-2.540;QD=3.77;ReadPosRankSum=-1.137;VQSLOD=0.7794;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:49.03:0,49,382	1/1:4,0:4:3:25,3,0	0/0:22,0:13:17.47:0,17,180	0/1:16,0:13:25.23:25,0,56	0/0:18,0:18:22.78:0,23,211	0/0:15,0:15:33.93:0,34,291	0/0:24,0:24:56.61:0,57,843	0/1:24,2:24:67.22:277,0,67	0/0:17,0:17:25.11:0,25,272	0/1:18,0:18:9.66:10,0,316	0/0:18,0:18:19.75:0,20,164	0/0:25,0:25:65.37:0,65,792	0/0:15,0:15:38.96:0,39,519	0/0:14,0:14:32.15:0,32,408	0/0:16,0:16:26.84:0,27,234	0/0:24,0:24:55.66:0,56,735	0/1:37,6:43:99:352,0,253	0/0:20,0:20:31.86:0,32,258	0/0:19,0:18:16.59:0,17,316	0/0:23,0:23:4.44:0,4,303	0/0:17,0:17:24.76:0,25,223	0/0:17,0:17:41.20:0,41,364	0/0:8,0:8:11.88:0,12,139	0/0:27,0:26:64.11:0,64,922	0/1:15,0:15:2.31:2,0,204	0/1:27,0:27:17.20:17,0,264	0/0:22,0:22:53.42:0,53,480	0/1:6,0:5:1.91:2,0,96
chr10	57439520	.	GAA	G	1714.41	PASS	AB=0.697;AC=26;AF=0.464;AN=56;BaseQRankSum=2.996;DP=533;FS=0.956;HRun=17;HaplotypeScore=76.5234;InbreedingCoeff=0.4696;MQ=59.32;MQ0=2;MQRankSum=3.396;QD=5.20;ReadPosRankSum=5.131;VQSLOD=-0.7255;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:11,17:28:1.62:141,0,2	1/1:0,0:4:2.74:12,3,0	0/0:21,0:11:19.42:0,19,160	0/0:16,0:13:7.67:0,8,64	1/1:11,7:18:0.63:53,1,0	0/0:14,0:15:31.60:0,32,227	0/0:19,1:21:16.25:0,16,382	1/1:11,0:24:43.26:178,43,0	0/1:13,3:18:5.88:161,0,6	1/1:14,2:17:12.65:127,13,0	1/1:7,8:16:20.35:171,20,0	0/0:26,0:26:51.52:0,52,454	0/0:14,0:14:35.54:0,36,360	0/0:12,0:12:23.09:0,23,194	1/1:8,7:15:17.55:132,18,0	0/0:21,0:21:33.85:0,34,404	0/1:23,0:44:8.78:149,0,9	1/1:17,5:22:14.23:188,14,0	0/1:13,7:19:52.58:75,0,53	1/1:16,3:22:10.09:131,10,0	1/1:11,5:17:8.95:141,9,0	0/0:16,0:16:26.11:0,26,224	0/0:8,0:9:11.24:0,11,81	0/0:25,0:25:33.26:0,33,545	0/1:3,8:16:22.38:61,0,22	1/1:13,10:26:1.30:150,1,0	0/1:16,4:21:33.24:33,0,41	0/0:6,0:5:0:0,0,0
chr10	57440806	.	A	AT	1500.56	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-6.942;DP=586;FS=8.007;HRun=9;HaplotypeScore=56.5291;InbreedingCoeff=0.9013;MQ=63.03;MQ0=0;MQRankSum=-0.506;QD=21.75;ReadPosRankSum=1.291;VQSLOD=4.3033;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,28:33:52.16:804,52,0	0/0:6,0:6:18:0,18,156	0/0:9,0:5:4.59:0,5,51	0/0:8,0:6:8.95:0,9,71	1/1:2,20:23:33.93:573,34,0	0/0:18,0:18:47.99:0,48,417	0/0:15,0:15:32.95:0,33,283	0/0:32,0:32:71.33:0,71,606	0/0:16,0:16:11.81:0,12,331	0/0:21,0:21:50.98:0,51,442	0/0:14,0:14:32.99:0,33,286	0/0:17,0:17:29.96:0,30,256	0/0:19,0:20:50.01:0,50,423	0/0:28,0:28:80.98:0,81,703	0/0:21,0:21:62.99:0,63,547	1/1:2,11:13:24.06:266,24,0	0/0:55,0:56:99:0,143,1218	0/0:25,0:25:68.92:0,69,587	0/0:23,0:23:62.99:0,63,547	0/0:11,0:11:9.03:0,9,190	0/0:34,0:33:80.96:0,81,703	0/0:13,0:13:26.98:0,27,233	0/0:21,0:21:59.97:0,60,517	0/0:26,0:26:74.96:0,75,646	0/0:19,0:19:47.95:0,48,412	0/0:28,1:29:41.78:0,42,589	0/0:27,0:26:71.98:0,72,625	0/0:8,0:8:23.97:0,24,203
chr10	57442123	.	G	GA	347.82	PASS	AB=0.944;AC=3;AF=0.054;AN=56;BaseQRankSum=-4.746;DP=580;FS=13.606;HRun=9;HaplotypeScore=55.5232;InbreedingCoeff=0.7134;MQ=75.18;MQ0=0;MQRankSum=0.350;QD=10.23;ReadPosRankSum=-0.170;VQSLOD=0.7538;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:62.97:0,63,543	0/0:13,0:13:35.99:0,36,312	0/1:16,1:17:1.82:2,0,198	0/0:13,0:13:23.93:0,24,205	0/0:32,0:32:89.98:0,90,781	0/0:30,0:30:89.96:0,90,776	0/0:13,0:13:32.99:0,33,287	0/0:20,0:20:56.99:0,57,495	0/0:23,0:23:65.95:0,66,565	0/0:26,1:27:65.91:0,66,565	0/0:27,0:27:68.97:0,69,599	0/0:19,0:19:44.97:0,45,387	0/0:9,0:9:26.99:0,27,234	0/0:14,0:14:35.99:0,36,313	0/0:27,0:27:68.97:0,69,599	1/1:1,16:17:19.07:439,19,0	0/0:44,0:44:99:0,123,1052	0/0:18,0:18:44.90:0,45,377	0/0:25,0:25:56.97:0,57,495	0/0:20,0:20:53.96:0,54,465	0/0:18,0:18:50.99:0,51,443	0/0:15,0:15:32.97:0,33,286	0/0:19,0:19:44.99:0,45,391	0/0:16,0:16:47.97:0,48,412	0/0:29,0:29:80.96:0,81,698	0/0:23,0:23:59.98:0,60,521	0/0:17,1:18:8.77:0,9,298	0/0:12,0:12:35.99:0,36,312
chr10	57443149	.	GC	G	168.60	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.733;DP=360;FS=3.661;HRun=3;HaplotypeScore=37.1528;InbreedingCoeff=0.5665;MQ=67.49;MQ0=0;MQRankSum=-0.904;QD=21.07;ReadPosRankSum=1.378;VQSLOD=3.0714;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:63.20:0,63,884	0/0:3,0:3:9.03:0,9,130	0/0:5,0:5:12.04:0,12,161	0/0:1,0:1:3.01:0,3,43	0/0:5,0:5:15.05:0,15,216	0/0:3,0:3:9.03:0,9,129	0/0:44,0:44:99:0,132,1878	0/0:11,0:11:33.09:0,33,442	0/0:5,0:5:15.05:0,15,216	0/0:10,0:10:30.09:0,30,417	0/0:3,0:3:9.03:0,9,129	0/0:12,0:12:36.12:0,36,518	0/0:4,0:4:12.04:0,12,173	0/0:8,0:8:24.08:0,24,346	0/0:10,0:10:30.08:0,30,413	1/1:0,8:8:21.07:260,21,0	0/0:23,0:23:69.23:0,69,993	0/0:29,0:29:87.29:0,87,1249	0/0:13,0:13:30.08:0,30,412	0/0:5,0:5:15.05:0,15,216	0/0:65,0:65:99:0,183,2594	0/0:6,0:6:12.04:0,12,173	0/0:3,0:3:6.02:0,6,86	0/0:24,0:24:72.23:0,72,1019	0/0:12,0:12:36.12:0,36,518	0/0:17,0:17:51.17:0,51,735	0/0:6,0:6:18.05:0,18,241	0/0:2,0:2:6.02:0,6,86
chr10	57444681	.	G	GT	1198.81	PASS	AB=0.926;AC=11;AF=0.196;AN=56;BaseQRankSum=-5.035;DP=789;FS=0.434;HRun=12;HaplotypeScore=89.0499;InbreedingCoeff=0.4119;MQ=71.67;MQ0=6;MQRankSum=0.225;QD=5.65;ReadPosRankSum=-2.509;VQSLOD=1.8102;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:35:53.88:0,54,473	1/1:2,8:13:10.65:225,11,0	0/0:49,0:33:8.07:0,8,150	0/1:27,0:18:5.78:25,0,6	0/0:32,3:37:1.97:0,2,448	0/0:20,1:25:21.65:0,22,340	0/0:29,1:33:43.43:0,43,461	1/1:14,24:38:66:607,66,0	0/0:24,0:25:67.60:0,68,482	0/0:34,0:35:84.58:0,85,602	0/1:23,2:26:50.61:51,0,231	0/0:19,0:20:46.10:0,46,318	0/0:16,1:19:16.62:0,17,240	0/0:23,0:24:55.64:0,56,396	0/0:37,1:39:60.53:0,61,592	0/0:31,1:31:23.12:0,23,429	1/1:10,18:29:29.21:416,29,0	0/0:20,0:21:54.76:0,55,382	0/0:26,2:28:8.18:0,8,353	0/0:24,0:24:28.61:0,29,336	0/0:13,0:14:34.80:0,35,244	0/1:20,1:23:3.40:3,0,256	0/0:24,3:27:20.01:0,20,301	0/0:29,0:29:68.49:0,68,497	0/1:24,4:31:8.99:9,0,395	0/0:27,0:28:29.56:0,30,363	0/0:28,2:30:3.50:0,3,337	0/1:21,2:23:19.93:20,0,309
chr10	57444771	.	A	ATC	2087.02	PASS	AB=0.854;AC=20;AF=0.370;AN=54;BaseQRankSum=-4.287;DP=708;FS=1.893;HRun=0;HaplotypeScore=144.8316;InbreedingCoeff=0.3192;MQ=70.71;MQ0=11;MQRankSum=-1.282;QD=6.14;ReadPosRankSum=-0.931;VQSLOD=3.2545;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:43:36.85:0,37,303	0/0:9,0:9:14.82:0,15,147	./.	0/0:48,0:24:1.16:0,1,3	0/0:25,0:25:24.18:0,24,121	0/1:15,12:27:44.38:203,0,44	0/1:28,11:41:69.12:69,0,123	0/0:40,0:39:14.13:0,14,107	1/1:11,7:20:18.03:268,18,0	0/0:16,0:26:23.85:0,24,116	0/1:11,3:16:23.63:81,0,24	0/0:22,0:24:26.88:0,27,266	0/0:15,0:16:17.46:0,17,139	0/0:17,0:17:18.01:0,18,194	0/1:33,3:36:75.41:232,0,75	1/1:28,0:34:4.27:131,4,0	0/0:31,0:31:29.44:0,29,288	0/1:12,0:16:11.09:11,0,39	1/1:15,3:18:6.37:215,6,0	1/1:11,3:14:6.02:89,6,0	0/1:26,1:26:0.84:269,0,1	0/0:19,0:19:14.98:0,15,143	0/0:11,0:11:17.72:0,18,166	0/0:19,0:20:35.74:0,36,343	1/1:6,2:16:12.01:124,12,0	1/1:26,1:27:26.82:268,27,0	0/1:18,1:19:14.70:174,0,15	0/1:19,6:26:99:132,0,141
chr10	57444788	.	TC	T	313.61	PASS	AB=0.732;AC=2;AF=0.036;AN=56;BaseQRankSum=8.135;DP=743;FS=4.685;HRun=1;HaplotypeScore=123.0046;InbreedingCoeff=-0.0405;MQ=61.41;MQ0=16;MQRankSum=-0.340;QD=4.18;ReadPosRankSum=3.685;VQSLOD=0.8191;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:32,17:47:99:301,0,233	0/0:10,0:10:17.87:0,18,258	0/0:37,0:14:24.50:0,24,315	0/0:57,0:17:32.56:0,33,366	0/1:16,10:26:99:101,0,224	0/0:27,0:27:57.16:0,57,695	0/0:32,0:32:47.58:0,48,620	0/0:41,0:40:7.37:0,7,628	0/0:20,0:20:35.90:0,36,403	0/0:27,0:27:68.11:0,68,670	0/0:16,0:16:26.97:0,27,333	0/0:29,0:29:74.27:0,74,1005	0/0:20,0:20:52.19:0,52,653	0/0:20,0:20:54.14:0,54,723	0/0:34,0:33:77.86:0,78,1036	0/0:37,0:36:69.20:0,69,881	0/0:29,1:30:59.15:0,59,767	0/0:19,0:18:47.12:0,47,540	0/0:19,0:19:56.18:0,56,659	0/0:10,0:10:27.05:0,27,308	0/0:32,0:31:72.32:0,72,933	0/0:19,0:19:51.15:0,51,693	0/0:14,0:14:32.47:0,32,457	0/0:24,0:23:52.23:0,52,711	0/0:21,0:21:36.10:0,36,420	0/0:26,0:26:78.23:0,78,1016	0/0:20,0:20:54.14:0,54,696	0/0:26,0:25:57.17:0,57,765
chr10	57444790	.	TCTC	T	1044.43	PASS	AB=0.886;AC=5;AF=0.089;AN=56;BaseQRankSum=6.680;DP=733;FS=0.983;HRun=0;HaplotypeScore=140.7353;InbreedingCoeff=-0.0985;MQ=58.40;MQ0=16;MQRankSum=2.506;QD=6.78;ReadPosRankSum=1.476;VQSLOD=2.9335;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:31,17:46:99:606,0,161	0/1:10,0:10:27.23:27,0,71	0/0:38,0:13:27.56:0,28,362	0/0:55,0:16:27.78:0,28,328	0/1:16,10:26:99:224,0,176	0/0:26,0:26:51.17:0,51,812	0/0:32,0:32:38.27:0,38,793	0/1:40,0:39:99:230,0,350	0/0:20,0:20:35.17:0,35,554	0/0:26,0:26:59.67:0,60,710	0/0:18,0:18:32.55:0,33,482	0/0:28,0:28:72.10:0,72,1214	0/0:19,0:19:53.91:0,54,834	0/0:18,0:18:48.15:0,48,851	0/0:34,0:33:78.55:0,79,1422	0/0:36,0:35:66.20:0,66,974	0/1:29,0:30:74.63:75,0,263	0/0:19,0:18:19.06:0,19,471	0/0:22,0:22:66.08:0,66,970	0/0:8,0:8:21.06:0,21,329	0/0:30,0:29:67.94:0,68,1150	0/0:18,0:18:47.68:0,48,810	0/0:14,0:14:33.03:0,33,624	0/0:24,0:23:56.92:0,57,1018	0/0:22,0:22:36:0,36,534	0/0:26,0:26:78.24:0,78,1204	0/0:19,0:19:51.16:0,51,909	0/0:26,0:25:54.18:0,54,1017
chr10	57446741	.	CATAT	C	5716.77	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=1.411;DP=282;FS=5.992;HRun=0;HaplotypeScore=48.9752;InbreedingCoeff=0.7159;MQ=69.77;MQ0=4;MQRankSum=-2.315;QD=29.17;ReadPosRankSum=1.441;VQSLOD=3.9079;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,7:10:18.06:308,18,0	1/1:1,4:5:12.04:203,12,0	0/0:7,0:4:2.77:0,3,41	0/0:20,0:9:3.79:0,4,87	1/1:2,11:13:24.08:384,24,0	0/0:10,0:10:24.08:0,24,572	0/0:2,0:2:3.01:0,3,75	1/1:16,34:50:99:1469,102,0	1/1:1,4:5:9.03:154,9,0	1/1:5,6:11:18.04:280,18,0	1/1:0,4:4:12.04:206,12,0	0/0:5,0:5:9.03:0,9,226	0/0:7,0:7:12.04:0,12,279	0/0:4,0:4:3.01:0,3,71	1/1:0,8:8:6.02:103,6,0	1/1:2,1:3:3.01:51,3,0	1/1:4,22:26:60.20:1010,60,0	0/0:6,0:16:30.10:0,30,553	1/1:4,7:11:21.04:307,21,0	1/1:3,4:7:9.03:141,9,0	1/1:2,0:2:3:25,3,0	0/0:3,0:3:3.48:0,3,76	0/0:4,0:4:3.01:0,3,75	0/0:5,0:5:6.02:0,6,151	1/1:0,10:10:18.06:281,18,0	1/1:5,5:9:15.03:230,15,0	1/1:4,6:9:9.03:154,9,0	1/1:0,11:11:24.08:411,24,0
chr10	57451300	.	A	ACGCGCGCGCGCG	1096.61	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=7.165;DP=675;FS=21.396;HRun=0;HaplotypeScore=237.3953;InbreedingCoeff=0.2204;MQ=65.13;MQ0=20;MQRankSum=-7.233;QD=9.06;ReadPosRankSum=-1.096;VQSLOD=0.7362;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:25:45.15:0,45,1419	0/0:11,0:11:24.54:0,25,804	0/0:33,0:20:46.39:0,46,1478	0/0:39,0:25:65.67:0,66,1934	0/0:21,0:21:34.32:0,34,985	0/0:11,0:11:18.06:0,18,674	0/0:34,0:34:78.68:0,79,2521	0/0:25,0:24:47.46:0,47,1496	0/0:21,0:18:21.49:0,21,431	0/1:25,0:24:3.96:4,0,1295	0/0:16,0:15:15.79:0,16,288	0/0:29,0:28:64.43:0,64,2035	0/0:27,0:27:72.72:0,73,2612	0/0:22,0:22:54.19:0,54,1962	0/0:24,0:21:34.93:0,35,1156	0/0:36,0:35:58.46:0,58,1695	0/0:28,0:26:49.05:0,49,1603	1/1:10,5:16:24.05:1115,24,0	0/1:27,0:25:37.16:37,0,1244	0/0:21,0:21:16.28:0,16,451	0/0:40,0:38:60.92:0,61,1924	0/0:19,0:18:42.13:0,42,1296	0/0:12,0:12:11.44:0,11,829	0/0:31,0:31:75.24:0,75,2632	0/1:20,0:18:1.38:1,0,918	0/0:25,0:24:47.46:0,47,1633	0/1:18,0:18:37.26:37,0,488	0/1:14,0:14:27.13:27,0,834
chr10	57459156	.	G	GGT	1192.47	PASS	AB=0.877;AC=27;AF=0.563;AN=48;BaseQRankSum=-0.016;DP=722;FS=9.055;HRun=0;HaplotypeScore=108.9953;InbreedingCoeff=0.5000;MQ=65.63;MQ0=12;MQRankSum=0.867;QD=2.88;ReadPosRankSum=-2.444;VQSLOD=0.9799;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:38,4:41:3.01:43,3,0	1/1:12,0:12:3.01:44,3,0	./.	./.	0/1:16,1:18:18.77:99,0,19	0/0:20,0:20:1.38:0,1,57	0/0:23,0:24:10.10:0,10,81	./.	0/1:16,1:22:0:0,0,0	1/1:21,7:29:24.33:215,24,0	1/1:18,0:18:12:127,12,0	0/0:29,0:29:11.92:0,12,122	0/0:24,0:24:2.78:0,3,32	0/0:20,0:22:8.75:0,9,77	1/1:31,2:38:3:26,3,0	0/0:14,0:27:19.84:0,20,96	1/1:31,0:33:11.94:135,12,0	0/0:15,0:19:2.50:0,2,9	1/1:31,0:30:12.39:94,12,0	./.	1/1:43,15:58:6.01:70,6,0	0/0:19,0:21:6.01:0,6,64	0/0:16,0:15:6.01:0,6,63	0/1:29,0:29:14.94:15,0,55	1/1:20,0:20:12:114,12,0	1/1:28,1:27:24.33:197,24,0	1/1:13,2:15:3.01:44,3,0	1/1:16,0:16:12.02:131,12,0
chr10	57459939	.	AGTGT	A	5899.12	PASS	AB=0.650;AC=25;AF=0.446;AN=56;BaseQRankSum=8.453;DP=745;FS=4.453;HRun=0;HaplotypeScore=142.2388;InbreedingCoeff=0.8762;MQ=62.22;MQ0=14;MQRankSum=-0.756;QD=18.55;ReadPosRankSum=4.048;VQSLOD=4.1292;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:48:42.92:0,43,240	0/0:4,0:8:9.01:0,9,108	0/0:40,0:19:15.93:0,16,246	0/0:46,0:19:12.03:0,12,226	0/1:12,3:23:60.88:121,0,61	0/0:22,0:25:62.65:0,63,1215	0/0:26,0:33:62.09:0,62,1208	0/0:30,0:30:51.04:0,51,773	1/1:15,17:32:45.15:730,45,0	1/1:6,15:21:39.48:499,39,0	1/1:5,10:15:18.06:291,18,0	0/0:18,0:21:41.86:0,42,905	0/0:28,0:30:65.36:0,65,1252	0/0:28,0:29:56.66:0,57,1214	1/1:11,18:29:36.12:583,36,0	1/1:13,22:36:63.21:1021,63,0	0/0:18,0:32:12.04:0,12,191	0/0:12,0:23:36.11:0,36,589	1/1:10,5:12:11.36:186,11,0	1/1:3,15:18:27.09:427,27,0	1/1:13,28:43:33.11:534,33,0	0/0:18,0:18:42.12:0,42,840	0/0:8,0:8:14.79:0,15,262	0/0:31,0:34:53.91:0,54,1121	1/1:14,9:23:23.97:355,24,0	1/1:13,9:25:42.12:590,42,0	1/1:10,16:26:33.06:514,33,0	1/1:1,7:8:3.01:49,3,0
chr10	57460491	.	T	TC	22748.68	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-17.297;DP=772;FS=14.412;HRun=0;HaplotypeScore=66.0120;InbreedingCoeff=0.9998;MQ=83.08;MQ0=1;MQRankSum=-6.382;QD=42.92;ReadPosRankSum=3.515;VQSLOD=4.0473;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,52:53:99:2157,135,0	1/1:0,9:9:27.09:431,27,0	0/0:28,0:28:75.13:0,75,986	0/0:23,0:24:51.12:0,51,803	1/1:1,34:35:93.32:1476,93,0	0/0:17,0:17:51.17:0,51,713	0/0:23,0:23:69.21:0,69,947	1/1:2,31:33:93.28:1418,93,0	1/1:0,22:22:57.19:911,57,0	1/1:0,25:25:72.19:1081,72,0	1/1:0,21:21:54.18:863,54,0	0/0:23,0:23:63.21:0,63,881	0/0:21,0:21:63.19:0,63,849	0/0:20,0:20:60.18:0,60,806	1/1:0,29:29:75.26:1199,75,0	1/1:1,35:36:90.78:1439,91,0	1/1:0,31:31:87.25:1363,87,0	1/1:0,37:37:99:1582,99,0	1/1:1,26:27:78.24:1201,78,0	1/1:0,24:24:69.23:1091,69,0	1/1:0,38:38:99:1678,105,0	0/0:33,0:33:96.20:0,96,1282	0/0:19,0:19:54.18:0,54,755	0/0:34,0:31:96.32:0,96,1341	1/1:0,29:29:69.24:1103,69,0	1/1:0,29:29:87.30:1390,87,0	1/1:0,31:31:87.21:1360,87,0	1/1:0,21:21:63.21:1007,63,0
chr10	57460860	.	AGT	A	383.98	PASS	AB=0.934;AC=16;AF=0.333;AN=48;BaseQRankSum=2.003;DP=744;FS=20.190;HRun=0;HaplotypeScore=120.1026;InbreedingCoeff=0.1954;MQ=69.66;MQ0=7;MQRankSum=0.542;QD=1.17;ReadPosRankSum=3.375;VQSLOD=0.9706;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:25,11:36:15.86:111,0,16	1/1:5,0:9:11.36:56,11,0	./.	./.	1/1:18,7:25:11.95:105,12,0	0/0:18,0:18:0.86:0,1,368	0/1:27,0:29:10.61:11,0,174	./.	0/0:22,0:32:11.97:0,12,97	0/0:28,0:28:27.05:0,27,316	./.	0/1:39,0:39:5.57:6,0,288	0/1:18,4:22:17.58:18,0,144	0/1:35,0:35:1.73:2,0,182	0/0:25,0:32:5.83:0,6,52	0/1:22,3:25:79.39:79,0,96	1/1:22,0:33:11.36:56,11,0	1/1:15,0:21:11.20:55,11,0	0/0:20,0:20:12.03:0,12,140	0/0:16,0:28:8.75:0,9,70	0/0:59,0:58:23.99:0,24,234	0/1:25,1:26:11.57:12,0,226	0/0:14,0:14:9.03:0,9,131	0/1:26,0:26:31.86:32,0,284	0/0:18,0:18:15:0,15,144	0/0:27,0:27:39.05:0,39,446	0/0:23,0:23:17.65:0,18,156	0/0:10,0:10:9.50:0,9,114
chr10	57461101	.	TA	T	6953.48	PASS	AB=0.909;AC=37;AF=0.661;AN=56;BaseQRankSum=8.858;DP=592;FS=1.200;HRun=12;HaplotypeScore=61.8182;InbreedingCoeff=0.8905;MQ=73.48;MQ0=0;MQRankSum=-0.391;QD=16.40;ReadPosRankSum=3.968;VQSLOD=5.9159;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,27:29:75.75:563,76,0	1/1:1,8:9:26.89:207,27,0	0/1:18,2:15:14.05:14,0,112	0/0:12,0:11:16.11:0,16,95	1/1:1,18:19:53.48:398,53,0	0/0:24,0:24:51.08:0,51,507	0/0:11,1:12:9.74:0,10,260	1/1:5,23:29:67.66:498,68,0	1/1:5,16:21:38.82:302,39,0	1/1:5,10:16:31.87:235,32,0	1/1:0,22:22:62.66:480,63,0	0/0:24,0:24:66.08:0,66,643	0/0:13,0:14:18.34:0,18,323	0/0:19,0:19:48.07:0,48,472	1/1:6,19:25:47.80:371,48,0	1/1:4,15:19:38.84:302,39,0	1/1:5,22:27:56.76:441,57,0	1/1:6,16:22:27.30:287,27,0	1/1:3,12:15:35.77:269,36,0	1/1:2,25:27:68.70:534,69,0	1/1:5,19:24:41.12:324,41,0	0/0:18,0:18:51.10:0,51,516	0/0:20,0:20:39.03:0,39,380	0/0:22,2:24:4.64:0,5,410	1/1:6,20:27:53.75:418,54,0	1/1:3,25:30:78.77:590,79,0	1/1:4,27:31:68.72:534,69,0	1/1:0,12:12:23.90:186,24,0
chr10	57462660	.	AT	A	9002.27	PASS	AB=1.000;AC=37;AF=0.661;AN=56;BaseQRankSum=8.280;DP=513;FS=3.926;HRun=8;HaplotypeScore=51.6528;InbreedingCoeff=0.9106;MQ=73.19;MQ0=0;MQRankSum=-0.249;QD=24.01;ReadPosRankSum=0.030;VQSLOD=5.3685;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,31:31:84.14:811,84,0	1/1:2,11:13:33.05:318,33,0	0/0:11,0:11:27.08:0,27,322	0/1:13,0:12:39.23:39,0,89	1/1:0,21:21:60.09:579,60,0	0/0:15,0:15:45.13:0,45,532	0/0:4,0:4:9.01:0,9,96	1/1:3,32:35:93.13:891,93,0	1/1:2,15:17:35.91:348,36,0	1/1:2,16:18:48.08:463,48,0	1/1:2,15:18:44.10:412,44,0	0/0:15,0:15:39.12:0,39,471	0/0:16,0:16:42.11:0,42,487	0/0:17,0:17:48.15:0,48,580	1/1:2,16:18:48.07:464,48,0	1/1:0,12:12:33.05:319,33,0	1/1:1,26:27:75.12:724,75,0	1/1:1,9:10:27.04:261,27,0	1/1:1,10:11:29.41:269,29,0	1/1:1,19:20:57.09:550,57,0	1/1:1,24:25:60.10:579,60,0	0/0:21,0:21:54.17:0,54,652	0/0:22,0:22:66.18:0,66,783	0/0:17,0:17:51.10:0,51,588	1/1:0,12:12:30.05:288,30,0	1/1:2,26:28:78.12:753,78,0	1/1:3,23:26:60.09:579,60,0	1/1:5,14:20:38.09:354,38,0
chr10	57463084	.	C	CGTGT	1912.09	PASS	AB=0.883;AC=33;AF=0.717;AN=46;BaseQRankSum=1.537;DP=639;FS=10.205;HRun=0;HaplotypeScore=120.6495;InbreedingCoeff=0.0570;MQ=62.80;MQ0=10;MQRankSum=-2.070;QD=3.95;ReadPosRankSum=-2.525;VQSLOD=1.1170;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:47,0:48:4.66:5,0,341	1/1:6,1:8:3.01:70,3,0	./.	./.	0/1:27,0:28:33.85:34,0,101	1/1:20,4:26:8.86:154,9,0	0/1:11,5:21:41.73:106,0,42	1/1:25,0:25:8.87:58,9,0	0/1:26,0:26:0:0,0,0	1/1:17,0:17:13.11:127,13,0	1/1:7,0:12:3.01:44,3,0	1/1:15,4:19:8.62:147,9,0	0/0:16,0:16:14.64:0,15,186	0/0:31,0:31:18.06:0,18,268	1/1:17,0:23:3.01:52,3,0	0/1:21,0:27:2.96:3,0,84	1/1:10,9:25:13.27:289,13,0	0/1:23,0:25:67.63:84,0,68	1/1:22,0:21:13.26:132,13,0	./.	./.	0/1:21,0:21:9.18:152,0,9	0/1:14,2:18:15.92:185,0,16	0/1:18,11:35:57.51:58,0,83	1/1:13,0:12:6.02:97,6,0	1/1:24,0:24:25.73:233,26,0	1/1:17,0:17:3.46:25,3,0	./.
chr10	57463131	.	G	GTATA	3875.64	PASS	AB=1.000;AC=27;AF=0.482;AN=56;BaseQRankSum=10.871;DP=521;FS=13.872;HRun=0;HaplotypeScore=129.8096;InbreedingCoeff=0.5619;MQ=60.04;MQ0=11;MQRankSum=-3.949;QD=16.71;ReadPosRankSum=-0.553;VQSLOD=2.3724;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:46:93.04:0,93,1378	0/1:4,0:4:13.05:13,0,71	0/0:23,0:14:41.96:0,42,629	0/0:19,0:17:45.15:0,45,734	0/0:23,0:23:39.11:0,39,585	0/1:17,0:17:18.13:18,0,254	0/0:28,0:28:2.96:0,3,516	0/0:30,0:30:64.44:0,64,1168	1/1:29,0:29:14.27:214,14,0	1/1:8,0:8:23.82:378,24,0	1/1:14,0:14:8.60:147,9,0	0/1:11,0:10:26.60:27,0,213	0/0:16,0:16:42.07:0,42,565	0/0:20,0:20:54.06:0,54,681	1/1:12,0:13:12.02:214,12,0	0/0:19,0:19:33.06:0,33,497	0/1:27,0:26:64.82:65,0,403	0/0:19,0:19:45.66:0,46,521	1/1:5,12:18:48.56:712,49,0	1/1:11,0:11:9.47:123,9,0	1/1:21,0:21:18.53:295,19,0	0/0:14,0:14:1.99:0,2,280	0/1:10,0:10:28.85:29,0,209	0/0:31,0:30:18.33:0,18,609	1/1:13,0:13:20.94:345,21,0	1/1:15,0:15:36.26:610,36,0	1/1:15,0:15:36.07:555,36,0	1/1:6,0:5:9.03:130,9,0
chr10	57463479	.	A	ATACTGAGT	35428.71	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-10.176;DP=610;FS=4.227;HRun=0;HaplotypeScore=132.1035;InbreedingCoeff=0.9843;MQ=90.46;MQ0=0;MQRankSum=-17.602;QD=95.24;ReadPosRankSum=0.985;VQSLOD=5.3444;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,16:25:51.09:2044,51,0	1/1:1,7:9:18.06:776,18,0	0/0:37,0:37:99:0,105,2644	0/0:24,0:24:63.08:0,63,1612	1/1:7,22:35:72.07:2576,72,0	0/0:29,0:29:87.28:0,87,2443	0/0:18,0:18:54.19:0,54,1537	1/1:16,11:30:84.27:3344,84,0	1/1:2,11:15:33.11:1466,33,0	1/1:8,22:35:93.32:3844,93,0	1/1:5,13:20:39.09:1615,39,0	0/0:23,0:23:69.24:0,69,1990	0/0:24,0:24:69.24:0,69,2015	0/0:23,0:23:66.23:0,66,1855	1/1:5,27:33:84.29:3745,84,0	1/1:8,13:21:60.21:2492,60,0	1/1:0,6:13:12.04:542,12,0	1/1:5,2:9:12.04:508,12,0	1/1:8,7:22:60.19:2098,60,0	1/1:4,11:19:48.12:1838,48,0	1/1:6,4:11:21.03:832,21,0	0/0:28,0:28:81.28:0,81,2158	0/0:22,0:22:63.20:0,63,1733	0/0:10,0:10:30.10:0,30,839	1/1:3,6:16:27.09:1041,27,0	1/1:4,14:20:57.20:2455,57,0	1/1:8,23:33:84.29:3670,84,0	1/1:2,4:6:12.04:542,12,0
chr10	57463664	.	A	AAT	5172.79	PASS	AB=1.000;AC=35;AF=0.625;AN=56;BaseQRankSum=19.689;DP=641;FS=5.517;HRun=0;HaplotypeScore=197.0389;InbreedingCoeff=0.9245;MQ=84.89;MQ0=0;MQRankSum=-7.836;QD=13.13;ReadPosRankSum=2.798;VQSLOD=4.3513;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:39,4:43:99:446,101,0	1/1:9,0:9:22.15:148,22,0	0/0:27,0:27:75.24:0,75,1109	0/0:24,0:24:64.55:0,65,960	1/1:19,0:19:36.03:191,36,0	0/0:22,0:22:63.20:0,63,944	0/0:27,0:27:78.26:0,78,1195	1/1:24,0:24:61.63:375,62,0	1/1:18,0:18:47.85:250,48,0	1/1:30,1:31:78.88:411,79,0	1/1:23,0:22:46.62:238,47,0	0/0:25,0:25:75.24:0,75,1128	0/0:23,0:23:66.22:0,66,1010	0/0:27,0:27:75.23:0,75,1107	1/1:33,0:33:83.53:433,84,0	1/1:21,0:21:53.53:285,54,0	1/1:37,1:37:93.08:431,93,0	0/1:12,0:12:15.70:95,0,16	1/1:17,0:17:43.57:226,44,0	1/1:21,2:23:53.80:394,54,0	1/1:16,0:16:38.38:170,38,0	0/0:22,0:22:66.22:0,66,1008	0/0:19,0:19:57.17:0,57,820	0/0:31,0:31:93.32:0,93,1418	1/1:16,1:17:48.43:361,48,0	1/1:28,1:29:77.04:422,77,0	1/1:14,0:14:33.69:156,34,0	1/1:7,0:7:19.78:141,20,0
chr10	57463665	.	AGG	A	11624.72	PASS	AB=0.524;AC=35;AF=0.625;AN=56;BaseQRankSum=20.334;DP=624;FS=6.673;HRun=2;HaplotypeScore=167.0346;InbreedingCoeff=0.9227;MQ=85.78;MQ0=0;MQRankSum=-9.051;QD=30.92;ReadPosRankSum=3.524;VQSLOD=4.8482;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,37:39:99:1258,114,0	1/1:1,6:7:21.06:233,21,0	0/0:27,0:27:78.27:0,78,1570	0/0:24,0:24:68.99:0,69,1360	1/1:0,17:17:44.68:460,45,0	0/0:22,0:22:63.20:0,63,1244	0/0:27,0:27:81.28:0,81,1646	1/1:0,21:23:67.93:669,68,0	1/1:2,17:19:55.38:616,55,0	1/1:3,28:31:90.13:1004,90,0	1/1:3,19:21:56.77:562,57,0	0/0:25,0:25:75.26:0,75,1524	0/0:23,0:23:69.24:0,69,1386	0/0:27,0:27:78.24:0,78,1512	1/1:5,28:33:94.47:1023,94,0	1/1:3,18:21:63.14:678,63,0	1/1:3,34:36:99:1117,103,0	0/1:1,10:11:27.82:312,0,28	1/1:0,14:14:42.11:463,42,0	1/1:1,18:19:56.54:575,57,0	1/1:0,15:15:45.11:498,45,0	0/0:22,0:22:66.23:0,66,1341	0/0:19,0:19:54.19:0,54,1095	0/0:32,0:32:96.33:0,96,1938	1/1:5,12:17:49.12:518,49,0	1/1:3,27:30:90.22:1005,90,0	1/1:1,13:14:42.08:425,42,0	1/1:1,6:7:20.84:210,21,0
chr10	57463668	.	TC	T	9164.38	PASS	AB=0.524;AC=35;AF=0.625;AN=56;BaseQRankSum=20.412;DP=616;FS=4.977;HRun=1;HaplotypeScore=162.0107;InbreedingCoeff=0.9244;MQ=85.66;MQ0=0;MQRankSum=-9.540;QD=24.64;ReadPosRankSum=3.667;VQSLOD=4.8752;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,37:38:99:992,114,0	1/1:1,6:7:20.99:185,21,0	0/0:25,0:25:75.26:0,75,1191	0/0:25,0:25:69.12:0,69,946	1/1:1,17:18:47.78:394,48,0	0/0:21,0:21:63.21:0,63,995	0/0:27,0:27:81.24:0,81,1244	1/1:3,21:24:65.75:503,66,0	1/1:3,17:20:58.76:517,59,0	1/1:4,28:32:89.93:812,90,0	1/1:1,19:19:53.75:426,54,0	0/0:25,0:25:75.26:0,75,1199	0/0:23,0:23:69.17:0,69,1051	0/0:25,0:25:72.22:0,72,1122	1/1:5,28:33:94.89:808,95,0	1/1:2,18:20:59.88:513,60,0	1/1:2,34:35:98.95:876,99,0	0/1:1,10:11:14.90:242,0,15	1/1:0,14:14:41.98:366,42,0	1/1:1,18:19:56.77:470,57,0	1/1:0,15:15:44.94:394,45,0	0/0:23,0:23:69.22:0,69,1074	0/0:18,0:18:54.18:0,54,863	0/0:32,0:32:96.33:0,96,1532	1/1:4,12:16:44.03:400,44,0	1/1:3,27:30:89.92:802,90,0	1/1:0,13:13:38.88:310,39,0	1/1:0,6:6:17.96:155,18,0
chr10	57463672	.	A	ATG	11834.65	PASS	AB=1.000;AC=35;AF=0.625;AN=56;BaseQRankSum=18.741;DP=645;FS=6.173;HRun=0;HaplotypeScore=172.8460;InbreedingCoeff=0.9360;MQ=85.10;MQ0=0;MQRankSum=-7.178;QD=28.72;ReadPosRankSum=1.120;VQSLOD=5.9428;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:42,0:42:99:1254,120,0	1/1:9,1:10:30.02:353,30,0	0/0:25,0:25:69.23:0,69,1036	0/0:25,0:25:66.12:0,66,901	1/1:19,0:19:46.11:461,46,0	0/0:20,0:20:60.20:0,60,918	0/0:24,0:24:72.24:0,72,1079	1/1:30,0:30:82.94:711,83,0	1/1:21,0:21:63.01:695,63,0	1/1:31,0:31:89.95:966,90,0	1/1:22,0:21:56.72:495,57,0	0/0:23,0:23:69.23:0,69,1056	0/0:20,0:20:57.19:0,57,872	0/0:24,0:24:69.23:0,69,1037	1/1:32,0:32:95.95:984,96,0	1/1:20,0:20:59.90:579,60,0	1/1:35,3:40:99:1099,102,0	0/1:13,0:13:6.80:375,0,7	1/1:14,5:19:57.05:600,57,0	1/1:22,0:22:60.27:538,60,0	1/1:18,0:18:54.02:580,54,0	0/0:22,0:22:63.21:0,63,955	0/0:19,0:19:57.18:0,57,851	0/0:31,0:31:93.29:0,93,1400	1/1:17,0:17:40.90:457,41,0	1/1:30,0:30:90.07:976,90,0	1/1:18,0:18:50.85:479,51,0	1/1:6,2:8:20.27:232,20,0
chr10	57466189	.	A	ACAG	24480.95	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-2.401;DP=628;FS=3.257;HRun=0;HaplotypeScore=90.7106;InbreedingCoeff=0.9993;MQ=66.00;MQ0=0;MQRankSum=-7.210;QD=57.33;ReadPosRankSum=4.566;VQSLOD=7.2030;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,42:45:99:2618,111,0	1/1:1,12:13:30.10:708,30,0	0/0:26,0:26:78.26:0,78,1315	0/0:22,0:22:55.68:0,56,976	1/1:1,19:20:48.16:1131,48,0	0/0:20,0:20:57.20:0,57,1005	0/0:15,0:15:45.15:0,45,793	1/1:2,18:23:66.21:1447,66,0	1/1:2,30:33:69.24:1628,69,0	1/1:1,12:15:45.13:939,45,0	1/1:3,18:21:51.18:1202,51,0	0/0:22,0:22:66.23:0,66,1157	0/0:23,0:23:63.22:0,63,1098	0/0:16,0:16:48.16:0,48,845	1/1:1,29:30:60.07:1416,60,0	1/1:2,33:34:93.32:2197,93,0	1/1:2,22:26:59.74:1366,60,0	1/1:0,17:17:48.16:1133,48,0	1/1:3,18:22:63.22:1476,63,0	1/1:2,22:24:63.22:1487,63,0	1/1:0,33:34:87.28:2057,87,0	0/0:14,0:14:36.12:0,36,635	0/0:22,0:22:63.20:0,63,1071	0/0:21,0:21:63.22:0,63,1106	1/1:2,14:16:24.08:567,24,0	1/1:0,23:25:72.23:1621,72,0	1/1:0,16:19:39.13:920,39,0	1/1:0,8:8:24.08:567,24,0
chr10	57466331	.	C	CT	222.62	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.285;DP=735;FS=3.328;HRun=1;HaplotypeScore=78.4198;InbreedingCoeff=0.9251;MQ=52.11;MQ0=50;MQRankSum=3.224;QD=17.12;ReadPosRankSum=0.494;VQSLOD=3.9282;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:36:84.27:0,84,1087	0/0:11,0:10:27.08:0,27,338	0/0:10,0:4:8.98:0,9,97	0/0:24,0:9:15.01:0,15,161	0/0:23,0:22:63.20:0,63,818	0/0:20,0:20:50.93:0,51,596	0/0:34,0:34:99:0,99,1250	0/0:28,0:18:54.12:0,54,663	0/0:32,0:28:71.86:0,72,852	0/0:29,0:27:78.23:0,78,985	0/0:23,0:23:66.21:0,66,838	0/0:25,0:25:72.17:0,72,898	0/0:17,0:17:51.16:0,51,651	0/0:20,0:20:54.18:0,54,699	0/0:30,0:28:72.22:0,72,918	1/1:0,13:11:21.07:315,21,0	0/0:58,0:50:99:0,144,1800	0/0:37,0:34:99:0,102,1292	0/0:28,0:20:60.14:0,60,721	0/0:17,0:16:42.10:0,42,514	0/0:77,0:68:99:0,178,2233	0/0:11,0:11:33.10:0,33,416	0/0:14,0:13:36.12:0,36,467	0/0:19,0:19:57.19:0,57,739	0/0:19,0:17:51.16:0,51,648	0/0:31,0:29:87.20:0,87,1057	0/0:31,0:30:90.28:0,90,1153	0/0:13,0:11:33.09:0,33,412
chr10	57466370	.	CCT	C	347.91	PASS	AB=0.787;AC=3;AF=0.060;AN=50;BaseQRankSum=4.651;DP=679;FS=2.253;HRun=0;HaplotypeScore=57.2536;InbreedingCoeff=-0.0705;MQ=38.22;MQ0=164;MQRankSum=-0.853;QD=3.31;ReadPosRankSum=-0.303;VQSLOD=1.6744;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:27,15:26:99:346,0,449	0/0:8,0:6:12.04:0,12,220	./.	./.	0/1:17,9:17:86.80:87,0,552	0/0:14,0:8:18.06:0,18,327	0/0:28,0:20:57.19:0,57,1013	0/0:36,0:9:21.05:0,21,352	0/0:23,0:14:28.34:0,28,480	0/0:30,0:20:57.18:0,57,1013	0/0:18,0:13:33.11:0,33,604	0/0:27,0:23:39.01:0,39,708	0/0:23,0:13:33.11:0,33,602	0/0:15,0:15:27.09:0,27,494	0/0:22,0:20:45.15:0,45,807	./.	0/0:53,0:34:96.29:0,96,1685	0/1:32,5:27:10.66:11,0,1182	0/0:38,0:12:36.07:0,36,623	0/0:8,0:6:18.06:0,18,321	0/0:87,0:49:92.54:0,93,1701	0/0:5,0:3:6.02:0,6,110	0/0:8,0:4:12.04:0,12,210	0/0:16,0:11:30.09:0,30,519	0/0:20,0:11:33.11:0,33,587	0/0:27,0:16:48.16:0,48,872	0/0:32,0:25:69.24:0,69,1263	0/0:9,0:7:21.07:0,21,384
chr10	57468629	.	G	GA	1747.92	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-8.011;DP=485;FS=12.241;HRun=10;HaplotypeScore=51.9500;InbreedingCoeff=0.8978;MQ=60.95;MQ0=2;MQRankSum=2.051;QD=23.62;ReadPosRankSum=0.532;VQSLOD=3.5794;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:50.89:0,51,417	1/1:0,7:7:21.05:224,21,0	0/0:16,0:11:5.64:0,6,120	0/0:9,0:4:11.98:0,12,97	0/0:22,1:22:33.92:0,34,481	0/0:15,0:15:41.93:0,42,344	0/0:18,0:18:47.93:0,48,391	1/1:2,22:25:56.98:589,57,0	0/0:12,0:12:35.94:0,36,292	0/0:26,0:27:73.93:0,74,593	0/0:13,0:12:32:0,32,252	0/0:9,0:9:23.95:0,24,194	0/0:16,0:15:44.95:0,45,369	0/0:21,0:21:56.86:0,57,466	0/0:17,0:17:50.94:0,51,418	1/1:2,9:11:2.46:231,2,0	1/1:1,30:31:81.19:854,81,0	0/0:16,0:16:20.13:0,20,320	0/0:14,0:14:32.94:0,33,269	0/0:22,0:22:58.94:0,59,472	0/0:13,0:13:14.31:0,14,206	0/0:21,0:20:53.86:0,54,435	0/0:14,0:15:34.99:0,35,277	0/0:22,0:22:62.92:0,63,516	0/0:21,0:21:62.91:0,63,515	0/0:22,0:22:62.92:0,63,517	0/0:13,0:13:35.94:0,36,295	0/0:12,0:12:26.95:0,27,221
chr10	57470225	.	G	GT	2062.32	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-11.318;DP=696;FS=1.459;HRun=9;HaplotypeScore=62.9151;InbreedingCoeff=0.9555;MQ=68.05;MQ0=4;MQRankSum=-0.566;QD=22.42;ReadPosRankSum=-0.964;VQSLOD=4.1607;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:95.06:0,95,830	1/1:0,4:4:12.03:133,12,0	0/0:18,0:15:19.96:0,20,213	0/0:14,0:8:11.97:0,12,100	0/0:33,0:36:94.02:0,94,787	0/0:23,0:23:62.99:0,63,547	0/0:21,0:21:47.93:0,48,409	1/1:8,28:36:81.19:879,81,0	0/0:16,0:16:44.99:0,45,391	0/0:35,0:35:89.96:0,90,779	0/0:28,1:28:44.79:0,45,618	0/0:21,0:21:50.96:0,51,440	0/0:31,1:32:50.67:0,51,654	0/0:28,0:28:74.94:0,75,646	0/0:17,0:17:26.59:0,27,387	1/1:1,21:22:48.13:531,48,0	1/1:3,14:17:16.07:405,16,0	1/1:0,13:13:27.04:286,27,0	0/0:24,0:24:56.93:0,57,485	0/0:30,0:30:68.93:0,69,590	0/0:30,0:30:83.87:0,84,707	0/0:34,0:34:95.97:0,96,833	0/0:25,2:27:5.66:0,6,502	0/0:14,0:14:41.98:0,42,362	0/0:29,1:30:44.57:0,45,594	0/0:35,0:35:89.97:0,90,778	0/0:38,0:38:99:0,100,858	0/0:13,0:13:38.99:0,39,338
chr10	57471218	.	G	GTTCT	4965.45	PASS	AB=0.941;AC=35;AF=0.625;AN=56;BaseQRankSum=10.062;DP=537;FS=23.241;HRun=0;HaplotypeScore=146.0192;InbreedingCoeff=0.8699;MQ=60.37;MQ0=6;MQRankSum=-5.418;QD=13.75;ReadPosRankSum=-4.429;VQSLOD=2.0143;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,14:25:20.64:387,21,0	1/1:8,0:9:8.90:213,9,0	0/0:26,0:11:11.18:0,11,201	0/0:18,0:6:14.97:0,15,159	1/1:6,20:32:56.36:750,56,0	0/0:16,0:16:42.03:0,42,660	0/0:24,0:27:49.86:0,50,936	1/1:41,0:34:64.86:611,65,0	1/1:12,0:13:11.98:106,12,0	1/1:15,0:16:32.80:254,33,0	1/1:25,0:25:27.12:227,27,0	0/0:18,0:18:15.34:0,15,511	0/0:21,0:21:54.07:0,54,805	0/0:15,0:15:32.95:0,33,537	1/1:13,0:15:28.35:208,28,0	1/1:4,0:18:32.12:453,32,0	1/1:23,0:22:51.40:406,51,0	1/1:3,0:11:5.85:62,6,0	1/1:27,0:28:23.09:298,23,0	1/1:14,0:14:18.64:133,19,0	1/1:18,0:18:28.11:213,28,0	0/0:9,0:9:23.91:0,24,291	0/0:15,0:16:36.67:0,37,671	0/0:10,0:10:21.03:0,21,317	1/1:18,0:18:7.09:38,7,0	1/1:25,0:25:44.09:382,44,0	0/1:15,0:16:22.29:60,0,22	1/1:13,0:14:20.94:167,21,0
chr10	57471220	.	T	TC	2642.33	PASS	AB=0.892;AC=24;AF=0.429;AN=56;BaseQRankSum=6.484;DP=550;FS=4.179;HRun=0;HaplotypeScore=132.5604;InbreedingCoeff=0.1740;MQ=58.43;MQ0=7;MQRankSum=-2.697;QD=7.05;ReadPosRankSum=1.555;VQSLOD=3.6662;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:24:25.90:60,0,26	0/1:9,0:9:24.30:60,0,24	0/0:26,0:11:11.15:0,11,170	0/0:17,0:5:14.96:0,15,137	0/1:29,0:29:7.67:199,0,8	0/0:17,0:17:50.42:0,50,555	0/0:26,0:26:66.61:0,67,769	0/1:40,1:33:1.68:374,0,2	0/1:5,10:15:4.96:106,0,5	1/1:17,1:18:22.17:220,22,0	0/1:22,3:25:36.55:196,0,37	0/0:18,0:18:46.63:0,47,505	0/0:20,0:20:60.13:0,60,706	0/0:16,0:16:39:0,39,457	0/1:17,0:17:7.72:194,0,8	0/1:20,0:20:7.67:81,0,8	0/1:22,0:21:47.75:99,0,48	1/1:11,0:11:2.67:17,3,0	0/1:29,1:30:13.65:266,0,14	1/1:16,1:17:20.48:129,20,0	1/1:17,0:17:24.78:210,25,0	0/0:8,0:8:16.45:0,16,198	0/0:16,0:16:47.12:0,47,541	0/0:11,0:10:27.05:0,27,322	0/1:8,12:20:41.32:42,0,41	1/1:26,0:26:7.67:311,8,0	0/1:9,11:20:9.43:108,0,9	1/1:14,0:14:20.19:154,20,0
chr10	57471231	.	TC	T	3726.88	PASS	AB=0.996;AC=29;AF=0.518;AN=56;BaseQRankSum=1.854;DP=535;FS=6.072;HRun=1;HaplotypeScore=74.9163;InbreedingCoeff=0.4523;MQ=54.25;MQ0=12;MQRankSum=-6.264;QD=10.44;ReadPosRankSum=-4.761;VQSLOD=-0.4333;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:13.98:0,14,136	0/1:9,0:9:63.54:72,0,64	0/1:27,0:11:3.93:4,0,66	0/0:18,0:4:5.53:0,6,22	0/1:28,0:28:95.45:95,0,165	0/0:19,0:19:26.87:0,27,401	0/0:24,0:24:37.19:0,37,454	0/1:35,1:28:99:275,0,116	1/1:14,0:14:29.54:206,30,0	1/1:23,1:23:66.56:465,67,0	1/1:26,0:26:59.86:411,60,0	0/0:18,0:18:2.76:0,3,288	0/0:18,0:18:42.39:0,42,390	0/0:15,0:15:19.88:0,20,255	1/1:13,0:13:32.60:219,33,0	0/0:26,0:26:8.57:0,9,263	0/1:24,0:23:99:110,0,172	0/1:12,0:11:1.99:2,0,88	1/1:23,2:25:66.35:440,66,0	1/1:5,15:20:31.83:228,32,0	1/1:11,0:11:24.66:171,25,0	0/0:6,0:6:2.06:0,2,82	0/1:14,0:14:30.01:30,0,151	0/0:11,0:10:26.55:0,27,227	1/1:15,0:15:34.33:240,34,0	1/1:25,0:25:66.97:446,67,0	1/1:20,0:20:38.17:263,38,0	1/1:1,13:14:5.97:50,6,0
chr10	57471583	.	C	CTT	3049.20	PASS	AB=0.703;AC=31;AF=0.554;AN=56;BaseQRankSum=2.418;DP=528;FS=2.559;HRun=13;HaplotypeScore=84.7930;InbreedingCoeff=0.5017;MQ=76.33;MQ0=1;MQRankSum=-0.199;QD=8.20;ReadPosRankSum=-0.885;VQSLOD=1.4215;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,9:30:34.85:302,35,0	1/1:1,7:10:17.52:208,18,0	0/0:24,0:18:19.61:0,20,167	0/0:11,0:8:9.41:0,9,63	1/1:5,1:17:28.15:179,28,0	0/0:13,0:14:32.63:0,33,276	0/1:22,0:23:5.24:5,0,227	1/1:11,17:31:56.49:652,56,0	1/1:5,0:22:29.95:111,30,0	1/1:16,0:25:30.12:168,30,0	1/1:6,0:13:12.94:54,13,0	0/0:19,0:23:35.10:0,35,331	0/0:18,0:18:11.91:0,12,243	0/0:12,0:12:20.86:0,21,175	1/1:5,1:21:27.96:127,28,0	0/0:19,0:19:53.89:0,54,463	1/1:7,21:30:50.65:642,51,0	1/1:5,0:9:2.13:26,2,0	0/1:10,2:21:93.46:133,0,93	0/1:15,1:24:46.78:116,0,47	1/1:5,2:15:26.33:150,26,0	0/0:12,0:13:23.46:0,23,218	0/0:19,0:21:13.94:0,14,263	0/1:6,0:8:0.29:0,0,89	0/1:4,2:17:17.83:141,0,18	1/1:10,2:23:9.81:139,10,0	0/1:9,0:19:13.45:22,0,13	0/1:2,1:14:12.24:74,0,12
chr10	57474585	.	A	AGGTGT	12434.41	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=0.475;DP=816;FS=5.509;HRun=0;HaplotypeScore=160.4480;InbreedingCoeff=0.9076;MQ=73.58;MQ0=15;MQRankSum=-11.254;QD=34.83;ReadPosRankSum=-3.270;VQSLOD=3.8819;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:54:76.46:0,76,1279	1/1:3,6:9:12.04:334,12,0	0/0:77,0:49:0.25:0,0,19	0/0:79,0:34:6.75:0,7,89	0/0:24,0:24:45.14:0,45,766	0/0:24,0:24:45.14:0,45,770	0/0:29,0:29:42.11:0,42,673	1/1:24,0:24:27.04:358,27,0	1/1:13,13:26:45.15:1241,45,0	1/1:21,21:43:69.14:1696,69,0	1/1:6,11:17:27.01:735,27,0	0/0:25,0:25:48.14:0,48,800	0/0:19,0:19:33.11:0,33,590	0/0:26,0:26:66.15:0,66,1032	1/1:17,15:35:51.18:1386,51,0	1/1:16,16:32:60.21:1668,60,0	1/1:13,8:24:18.06:484,18,0	0/0:18,0:18:30.08:0,30,505	1/1:19,2:20:6.02:167,6,0	1/1:8,12:21:36.12:980,36,0	1/1:17,10:28:21.03:509,21,0	0/0:27,0:27:60.14:0,60,1000	0/0:17,0:17:21.05:0,21,345	0/0:39,0:39:78.24:0,78,1320	1/1:17,9:26:36.59:990,37,0	1/1:12,8:21:36.09:895,36,0	1/1:16,8:26:33.58:906,34,0	1/1:1,2:3:3.01:83,3,0
chr10	57476534	.	A	AGACCTGTT	31221.70	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-3.624;DP=598;FS=1.149;HRun=0;HaplotypeScore=139.2094;InbreedingCoeff=0.9813;MQ=69.21;MQ0=1;MQRankSum=-17.162;QD=79.65;ReadPosRankSum=-2.203;VQSLOD=4.6358;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,11:22:32.97:1072,33,0	1/1:3,8:11:24.08:912,24,0	0/0:21,0:20:39.11:0,39,942	0/0:12,0:12:36.09:0,36,811	1/1:7,26:34:81.21:3275,81,0	0/0:19,0:19:54.19:0,54,1451	0/0:20,0:20:57.12:0,57,1342	1/1:11,5:17:36.09:1358,36,0	1/1:6,13:21:42.14:1802,42,0	1/1:9,13:23:63.22:2591,63,0	1/1:9,18:28:57.20:2322,57,0	0/0:24,0:24:57.17:0,57,1425	0/0:13,0:13:36.12:0,36,976	0/0:23,0:23:57.11:0,57,1535	1/1:8,7:17:27.05:1034,27,0	1/1:7,15:25:47.97:1959,48,0	1/1:6,7:15:24.04:910,24,0	1/1:6,5:14:18.06:774,18,0	1/1:14,6:21:45.15:1572,45,0	1/1:14,16:34:81.28:3364,81,0	1/1:7,9:12:18.02:665,18,0	0/0:26,0:26:72.22:0,72,1781	0/0:25,0:25:72.16:0,72,1831	0/0:23,0:23:66.23:0,66,1754	1/1:16,25:42:99:4282,105,0	1/1:12,8:23:51.13:1581,51,0	1/1:9,9:24:39.13:1491,39,0	1/1:3,1:4:6.02:258,6,0
chr10	57477833	.	CT	C	2150.65	PASS	AB=0.693;AC=17;AF=0.304;AN=56;BaseQRankSum=3.324;DP=603;FS=17.598;HRun=1;HaplotypeScore=116.5350;InbreedingCoeff=-0.4397;MQ=69.04;MQ0=0;MQRankSum=-9.322;QD=6.20;ReadPosRankSum=0.251;VQSLOD=-0.6844;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:12,12:24:80.20:80,0,118	0/1:13,4:17:38.47:38,0,119	0/0:18,0:16:37.96:0,38,509	0/0:13,1:15:3.17:0,3,332	0/1:20,13:33:3.03:3,0,258	0/0:22,0:22:66.21:0,66,1027	0/0:30,0:30:90.31:0,90,1432	0/1:19,10:29:99:400,0,140	0/1:9,10:19:48.65:49,0,112	0/1:11,8:19:81.95:330,0,82	0/0:10,15:25:8.70:0,9,152	0/0:32,0:32:93.30:0,93,1453	0/0:26,0:26:78.20:0,78,1149	0/0:22,0:22:66.15:0,66,936	0/1:10,15:25:61.12:61,0,98	0/1:12,14:26:99:267,0,119	0/1:8,10:17:64.55:65,0,108	0/1:6,4:10:48.25:132,0,48	0/1:16,5:21:99:207,0,130	0/1:17,12:29:42.87:43,0,202	0/1:6,5:11:20.78:21,0,52	0/0:24,0:24:72.21:0,72,1081	0/0:24,0:24:72.22:0,72,1097	0/0:18,0:18:54.18:0,54,862	0/1:9,12:21:77.50:90,0,78	0/1:12,8:20:99:256,0,143	0/1:6,12:18:76.67:208,0,77	0/1:4,3:7:52.83:58,0,53
chr10	57477887	.	T	TC	15045.13	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-6.561;DP=618;FS=27.955;HRun=0;HaplotypeScore=68.4197;InbreedingCoeff=0.9902;MQ=82.31;MQ0=0;MQRankSum=-8.384;QD=43.11;ReadPosRankSum=1.483;VQSLOD=2.8213;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,30:31:75.26:1198,75,0	1/1:1,3:4:9.03:144,9,0	0/0:35,0:33:96.31:0,96,1319	0/0:16,0:17:50.88:0,51,663	1/1:0,20:20:51.17:815,51,0	0/0:28,0:28:78.26:0,78,1090	0/0:32,0:32:96.31:0,96,1324	1/1:1,24:25:75.26:1196,75,0	1/1:0,24:24:66.23:1054,66,0	1/1:0,21:21:63.21:1005,63,0	1/1:0,13:13:39.13:622,39,0	0/0:37,0:37:99:0,111,1535	0/0:27,0:27:75.24:0,75,1033	0/0:19,0:19:54.17:0,54,734	1/1:1,22:23:63.21:1006,63,0	1/1:0,17:17:48.16:766,48,0	1/1:0,23:22:63.21:995,63,0	1/1:0,23:23:60.20:959,60,0	1/1:0,13:14:42.13:636,42,0	1/1:1,19:20:54.18:863,54,0	1/1:1,24:25:57.19:911,57,0	0/0:24,0:24:69.20:0,69,945	0/0:27,0:27:81.27:0,81,1129	0/0:23,0:23:69.23:0,69,965	1/1:1,18:19:48.16:767,48,0	1/1:0,20:20:60.20:959,60,0	1/1:1,20:21:54.18:863,54,0	1/1:0,6:6:18.06:287,18,0
chr10	57479035	.	CCCA	C	1884.30	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=6.607;DP=510;FS=11.974;HRun=0;HaplotypeScore=83.6111;InbreedingCoeff=0.9241;MQ=73.29;MQ0=0;MQRankSum=-0.812;QD=9.28;ReadPosRankSum=-4.439;VQSLOD=0.3563;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,2:17:8.82:84,9,0	0/0:12,0:12:30.10:0,30,377	0/0:11,0:11:26.49:0,26,293	0/0:13,0:12:24.78:0,25,530	1/1:12,0:11:19.03:133,19,0	0/0:16,0:16:45.14:0,45,919	0/0:35,0:35:99:0,102,1769	0/0:19,0:19:37.90:0,38,677	1/1:19,1:20:31.53:197,32,0	1/1:11,2:13:29.21:225,29,0	1/1:5,0:5:2.97:20,3,0	0/0:25,0:25:72.18:0,72,1299	0/0:20,0:20:52.99:0,53,1014	0/0:30,0:30:87.28:0,87,1685	1/1:18,1:19:29.35:292,29,0	1/1:25,1:26:39.84:247,40,0	0/0:22,0:22:54.12:0,54,634	0/0:26,0:26:63.15:0,63,768	1/1:6,1:7:11.25:76,11,0	1/1:8,1:9:12.46:123,12,0	1/1:22,0:22:11.34:57,11,0	0/0:21,0:21:63.19:0,63,1201	0/0:16,0:16:42.09:0,42,780	0/0:39,0:39:99:0,108,1957	1/1:18,2:20:36.94:282,37,0	1/1:15,0:15:37.14:268,37,0	1/1:16,2:17:13.99:100,14,0	0/0:2,0:2:1.48:0,1,5
chr10	57479036	.	CCA	C	3903.26	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=1.756;DP=513;FS=12.342;HRun=0;HaplotypeScore=69.4300;InbreedingCoeff=0.9423;MQ=73.22;MQ0=0;MQRankSum=-1.225;QD=18.77;ReadPosRankSum=-5.422;VQSLOD=1.3437;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:2,15:17:8.98:91,9,0	0/0:12,0:12:29.96:0,30,248	0/0:11,0:11:23.71:0,24,238	0/0:13,0:12:29.57:0,30,417	1/1:7,5:11:21.49:218,21,0	0/0:16,0:16:45.14:0,45,733	0/0:35,0:35:99:0,102,1400	0/0:19,0:19:37.74:0,38,501	1/1:2,18:20:33.06:448,33,0	1/1:11,6:17:41.94:447,42,0	1/1:5,0:5:2.97:20,3,0	0/0:25,0:25:72.12:0,72,1029	0/0:20,0:20:54.12:0,54,816	0/0:30,0:30:86.22:0,86,1318	1/1:12,8:20:52.34:615,52,0	1/1:3,23:26:41.86:590,42,0	0/0:22,0:22:53.92:0,54,441	0/0:26,0:26:62.89:0,63,524	1/1:6,1:7:14.90:131,15,0	1/1:8,1:9:14.97:125,15,0	1/1:0,20:20:11.56:178,12,0	0/0:21,0:21:63.15:0,63,961	0/0:16,0:16:42.08:0,42,631	0/0:39,0:39:99:0,106,1559	1/1:18,2:20:43.38:424,43,0	1/1:2,13:15:38.92:349,39,0	1/1:3,15:18:17.67:223,18,0	1/1:2,0:2:5.94:44,6,0
chr10	57479037	.	CA	C	2591.76	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=3.452;DP=508;FS=11.063;HRun=1;HaplotypeScore=65.5532;InbreedingCoeff=0.9443;MQ=72.53;MQ0=0;MQRankSum=-1.612;QD=12.28;ReadPosRankSum=-5.439;VQSLOD=-0.3564;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:17:8.93:63,9,0	0/0:12,0:12:27.93:0,28,126	0/0:11,0:11:25.87:0,26,212	0/0:12,0:11:28.86:0,29,307	1/1:11,0:10:21.44:174,21,0	0/0:15,0:15:45.13:0,45,562	0/0:36,0:36:99:0,105,1130	0/0:18,0:18:35.88:0,36,333	1/1:19,1:20:32.85:249,33,0	1/1:19,0:19:44.74:353,45,0	1/1:0,5:5:2.97:20,3,0	0/0:24,0:24:72.08:0,72,810	0/0:19,0:19:54.12:0,54,649	0/0:30,0:30:86.21:0,86,1038	1/1:19,2:21:53.86:434,54,0	1/1:25,0:25:41.61:321,42,0	0/0:22,0:22:50.46:0,50,257	0/0:26,0:26:58.50:0,58,288	1/1:9,0:9:20.81:154,21,0	1/1:9,1:10:14.95:119,15,0	1/1:20,0:20:11.95:91,12,0	0/0:21,0:21:63.14:0,63,758	0/0:14,0:14:42.09:0,42,494	0/0:37,0:37:99:0,106,1229	1/1:17,3:20:43.73:359,44,0	1/1:13,2:15:38.87:306,39,0	1/1:17,0:16:17.78:130,18,0	1/1:2,0:2:5.94:44,6,0
chr10	57479038	.	A	AC	1905.18	PASS	AB=1.000;AC=12;AF=0.222;AN=54;BaseQRankSum=-8.157;DP=514;FS=19.594;HRun=7;HaplotypeScore=72.1369;InbreedingCoeff=0.5949;MQ=72.41;MQ0=0;MQRankSum=-2.157;QD=14.77;ReadPosRankSum=-0.885;VQSLOD=1.8668;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:3.84:0,4,11	1/1:1,10:11:30.09:362,30,0	0/0:10,1:11:16.93:0,17,160	0/0:12,0:11:21.34:0,21,220	0/0:11,0:10:4.09:0,4,10	0/0:15,0:15:42.06:0,42,404	0/0:34,0:34:93.13:0,93,886	1/1:6,12:18:36:389,36,0	0/0:20,0:20:18.39:0,18,50	0/1:21,0:21:15.76:81,0,16	./.	0/0:27,0:27:57.07:0,57,549	0/0:19,0:19:45.06:0,45,434	0/0:30,0:30:75.11:0,75,722	0/1:21,0:21:3.27:3,0,30	0/0:26,0:26:23.81:0,24,65	1/1:4,20:24:45.14:544,45,0	1/1:2,23:25:54.17:652,54,0	0/1:7,0:7:2.03:35,0,2	0/0:10,0:10:3.83:0,4,10	0/0:23,0:23:6.79:0,7,19	0/0:19,0:19:48.06:0,48,458	0/0:13,0:13:36.06:0,36,347	0/0:39,0:39:95.95:0,96,904	0/0:20,0:20:5.06:0,5,13	0/0:16,0:16:3.07:0,3,9	0/0:18,0:17:9.15:0,9,26	0/1:2,0:2:0:0,0,0
chr10	57479364	.	A	AG	13270.74	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=10.010;DP=582;FS=3.504;HRun=3;HaplotypeScore=83.8400;InbreedingCoeff=0.9968;MQ=90.51;MQ0=0;MQRankSum=-4.589;QD=37.07;ReadPosRankSum=2.920;VQSLOD=5.4492;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:71.89:0,72,861	1/1:1,12:13:33.11:462,33,0	0/0:33,0:33:90.22:0,90,1045	0/0:19,0:19:54.06:0,54,607	0/0:9,0:8:21.06:0,21,250	0/0:17,0:17:48.14:0,48,572	0/0:17,0:17:48.15:0,48,576	1/1:3,21:24:63.21:882,63,0	1/1:2,20:22:57.19:798,57,0	1/1:0,28:27:78.26:1091,78,0	1/1:0,14:14:27.09:378,27,0	0/0:19,0:19:54.17:0,54,648	0/0:25,0:25:66.20:0,66,788	0/0:15,0:15:45.14:0,45,540	1/1:1,20:21:57.19:798,57,0	1/1:1,17:18:51.17:714,51,0	1/1:0,43:43:99:1722,123,0	1/1:0,25:25:69.23:966,69,0	1/1:3,25:28:75.21:1012,75,0	1/1:0,10:10:27.05:356,27,0	1/1:2,44:46:99:1638,117,0	0/0:12,0:12:30.09:0,30,360	0/0:9,0:9:18.04:0,18,205	0/0:24,0:24:72.22:0,72,864	1/1:1,19:21:51.13:692,51,0	1/1:0,14:15:45.15:626,45,0	1/1:0,23:23:63.21:882,63,0	1/1:0,7:7:18.06:252,18,0
chr10	57483717	.	T	TC	2429.08	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-0.547;DP=824;FS=14.446;HRun=4;HaplotypeScore=109.2241;InbreedingCoeff=0.9977;MQ=87.85;MQ0=1;MQRankSum=-4.957;QD=30.36;ReadPosRankSum=2.052;VQSLOD=2.1865;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,54:62:99:2059,153,0	0/0:11,0:11:33.06:0,33,360	0/0:27,0:26:62.24:0,62,702	0/0:33,0:33:87:0,87,906	1/1:2,16:18:36.12:492,36,0	0/0:24,0:24:66.14:0,66,734	0/0:45,0:45:99:0,132,1452	0/0:34,0:34:96.25:0,96,1061	0/0:27,0:27:75.19:0,75,833	0/0:35,0:35:99:0,99,1082	0/0:18,0:18:49:0,49,530	0/0:29,0:29:81.20:0,81,899	0/0:42,0:42:99:0,126,1397	0/0:24,0:24:72.19:0,72,804	0/0:40,0:40:99:0,120,1321	0/0:37,0:37:99:0,105,1170	0/0:43,0:43:99:0,129,1441	0/0:20,0:20:60.16:0,60,670	0/0:22,0:22:60.15:0,60,664	0/0:23,0:23:62.75:0,63,674	0/0:51,0:51:99:0,135,1528	0/0:21,0:21:54.11:0,54,590	0/0:21,0:21:56.88:0,57,613	0/0:28,0:28:81.21:0,81,907	0/0:19,0:19:54.13:0,54,600	0/0:29,0:29:81.19:0,81,886	0/0:31,0:31:90.26:0,90,1018	0/0:10,0:10:21.06:0,21,238
chr10	57487040	.	C	CA	2477.94	PASS	AB=0.910;AC=36;AF=0.643;AN=56;BaseQRankSum=1.086;DP=607;FS=3.279;HRun=16;HaplotypeScore=90.8128;InbreedingCoeff=0.5613;MQ=64.19;MQ0=14;MQRankSum=-0.032;QD=5.17;ReadPosRankSum=-0.611;VQSLOD=2.3656;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:23:11.31:0,11,32	1/1:8,0:8:13.55:57,14,0	0/1:49,0:17:0.38:0,0,5	0/1:52,1:24:5.13:5,0,39	0/0:14,0:19:20.91:0,21,75	0/0:22,0:23:30.02:0,30,197	0/0:14,0:16:7.82:0,8,106	1/1:33,1:34:45.75:248,46,0	1/1:18,2:19:28.93:162,29,0	1/1:9,0:21:21.74:153,22,0	0/1:9,6:16:10.85:104,0,11	0/0:16,0:17:12.23:0,12,80	0/1:20,0:21:55.74:56,0,125	0/1:14,1:15:2.15:2,0,80	1/1:16,2:19:34.29:212,34,0	1/1:22,2:24:24.75:165,25,0	1/1:24,0:24:58.59:274,59,0	1/1:16,0:17:29.91:134,30,0	1/1:21,0:20:14.62:89,15,0	1/1:20,0:21:22.86:132,23,0	1/1:10,3:14:25.93:162,26,0	0/1:15,2:17:42.39:42,0,77	0/0:11,1:13:0.57:0,1,85	0/0:16,0:16:23.40:0,23,132	1/1:10,1:14:31.03:159,31,0	1/1:12,16:26:37.32:240,37,0	1/1:14,4:20:35.74:215,36,0	1/1:2,0:14:11.40:57,11,0
chr10	57487043	.	A	AAC	584.85	PASS	AB=1.000;AC=10;AF=0.179;AN=56;BaseQRankSum=2.184;DP=622;FS=4.403;HRun=0;HaplotypeScore=109.1734;InbreedingCoeff=0.2516;MQ=65.88;MQ0=16;MQRankSum=-2.054;QD=4.18;ReadPosRankSum=4.764;VQSLOD=1.9848;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:3.23:0,3,309	0/0:8,0:8:23.95:0,24,213	0/0:61,0:21:25.27:0,25,219	0/0:61,0:24:29.19:0,29,213	0/0:20,0:20:56.99:0,57,567	0/0:23,0:22:53.01:0,53,752	0/0:16,0:16:48.02:0,48,550	0/0:35,0:35:78.61:0,79,703	0/0:19,0:18:18.66:0,19,162	0/1:19,0:18:18.68:19,0,65	0/0:17,0:17:9.27:0,9,273	0/0:17,0:17:39.22:0,39,427	0/0:20,0:20:35.59:0,36,556	0/0:17,0:17:50.94:0,51,537	0/1:16,0:16:19.75:20,0,81	1/1:23,0:23:22.73:150,23,0	0/0:26,0:26:68.84:0,69,628	1/1:4,13:19:32.91:424,33,0	0/0:22,0:21:34.60:0,35,290	0/0:21,0:21:12.02:0,12,191	0/1:14,0:14:3.67:4,0,131	0/0:17,0:17:40.74:0,41,453	0/0:14,0:14:39:0,39,434	0/0:17,0:17:36.01:0,36,458	0/1:14,0:14:51.41:53,0,51	0/0:27,0:25:9.08:0,9,205	0/1:20,0:20:51.64:52,0,161	0/1:14,0:14:15.69:16,0,28
chr10	57487044	.	A	AC	526.17	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-0.886;DP=611;FS=6.211;HRun=0;HaplotypeScore=97.2600;InbreedingCoeff=0.9903;MQ=65.20;MQ0=16;MQRankSum=-1.266;QD=12.53;ReadPosRankSum=3.172;VQSLOD=4.1477;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:31.68:0,32,324	0/0:8,0:8:23.41:0,23,145	0/0:60,0:20:26.47:0,26,217	0/0:60,0:23:28.48:0,28,227	0/0:20,0:20:56.97:0,57,530	0/0:23,0:22:63.06:0,63,720	0/0:16,0:16:46.33:0,46,494	0/0:35,0:35:72.82:0,73,436	0/0:19,0:18:25.25:0,25,216	0/0:18,0:17:33.93:0,34,222	0/0:17,0:17:33.42:0,33,291	0/0:17,0:17:41.46:0,41,419	0/0:19,0:19:41.14:0,41,483	0/0:17,0:17:49.52:0,50,487	0/0:16,0:16:28.95:0,29,132	1/1:3,16:23:42.56:461,43,0	0/0:26,0:26:55.66:0,56,313	1/1:18,1:18:30.12:186,30,0	0/0:22,0:21:50.31:0,50,398	0/0:21,0:21:53.63:0,54,399	0/0:13,0:13:24.50:0,25,182	0/0:15,0:15:40.68:0,41,417	0/0:14,0:14:37.31:0,37,391	0/0:14,0:14:36.01:0,36,418	0/0:14,0:14:35.62:0,36,221	0/0:26,0:24:45.69:0,46,299	0/0:20,0:20:36.34:0,36,245	0/0:14,0:14:17.73:0,18,114
chr10	57487046	.	A	AC	1714.09	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-7.126;DP=613;FS=0.473;HRun=0;HaplotypeScore=93.0184;InbreedingCoeff=0.9840;MQ=65.38;MQ0=16;MQRankSum=-0.135;QD=24.14;ReadPosRankSum=0.933;VQSLOD=4.5052;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:38.84:0,39,334	1/1:0,7:7:20.87:211,21,0	0/0:62,0:21:24.32:0,24,213	0/0:63,0:24:13.32:0,13,255	0/0:21,0:21:56.96:0,57,525	0/0:22,0:21:60.08:0,60,698	0/0:16,0:16:45.95:0,46,491	1/1:8,31:39:64.12:902,64,0	0/0:19,0:18:24.01:0,24,203	0/0:19,0:18:33.16:0,33,229	0/0:15,0:15:28:0,28,247	0/0:18,0:18:41.95:0,42,431	0/0:19,0:19:37.66:0,38,479	0/0:17,0:17:49.23:0,49,488	0/0:15,0:15:27.03:0,27,114	0/0:21,0:21:40.71:0,41,246	1/1:0,25:25:63.19:743,63,0	0/0:19,0:18:30.55:0,31,236	0/0:21,0:20:47.40:0,47,382	0/0:21,0:21:53.80:0,54,413	0/0:14,0:14:24.71:0,25,189	0/0:16,0:16:40.98:0,41,420	0/0:13,0:13:34.31:0,34,366	0/0:15,0:15:36:0,36,418	0/0:14,0:14:34.63:0,35,235	0/0:26,0:24:42.59:0,43,306	0/0:19,0:19:41.33:0,41,258	0/0:14,0:14:17.80:0,18,120
chr10	57487468	.	TAC	T	972.68	PASS	AB=0.907;AC=29;AF=0.558;AN=52;BaseQRankSum=5.559;DP=520;FS=3.639;HRun=0;HaplotypeScore=65.1747;InbreedingCoeff=0.4364;MQ=70.99;MQ0=9;MQRankSum=1.523;QD=3.14;ReadPosRankSum=2.375;VQSLOD=1.3731;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:32:19.89:98,20,0	./.	./.	0/0:31,0:24:0.89:0,1,2	1/1:11,0:17:11.32:55,11,0	0/0:14,0:14:3.91:0,4,205	0/1:26,0:26:2.39:2,0,320	0/0:26,0:26:27.02:0,27,298	1/1:5,9:14:18.05:197,18,0	1/1:11,7:18:12:120,12,0	1/1:10,3:11:3.01:33,3,0	0/0:9,0:9:18.06:0,18,268	0/0:16,1:16:24.07:0,24,339	0/1:17,3:20:14.81:15,0,184	1/1:15,7:24:20.72:192,21,0	0/1:15,2:17:14.79:15,0,183	0/0:26,0:25:8.98:0,9,90	0/0:7,0:15:11.94:0,12,97	0/1:12,3:15:26.83:27,0,39	1/1:10,5:15:9.02:99,9,0	1/1:24,11:35:10.84:104,11,0	0/1:14,1:15:14.79:15,0,200	0/0:13,0:13:9.03:0,9,127	0/0:27,7:34:12.29:0,12,574	1/1:3,8:11:6.02:66,6,0	1/1:15,3:18:3:33,3,0	1/1:4,5:9:3.01:33,3,0	1/1:8,2:11:5.85:47,6,0
chr10	57489699	.	ACAACAG	A	967.69	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=5.757;DP=480;FS=5.883;HRun=0;HaplotypeScore=97.9633;InbreedingCoeff=0.5683;MQ=55.40;MQ0=5;MQRankSum=-6.280;QD=14.23;ReadPosRankSum=1.210;VQSLOD=2.3615;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:20.97:0,21,175	0/0:6,0:6:8.96:0,9,70	0/1:19,0:9:3.40:3,0,43	0/0:22,0:11:22.31:0,22,204	0/0:3,0:3:8.99:0,9,76	0/0:9,0:9:26.97:0,27,231	0/0:48,0:48:99:0,135,2525	0/0:10,0:10:30:0,30,270	0/0:31,0:31:83.03:0,83,1095	0/0:7,0:7:20.99:0,21,192	0/0:3,0:3:5.99:0,6,50	0/0:24,0:24:69.12:0,69,1615	0/0:24,0:24:69.11:0,69,1579	0/0:34,0:34:98.76:0,99,1679	0/0:28,0:28:73.90:0,74,919	1/1:1,21:22:26.96:637,27,0	0/0:20,0:20:60.03:0,60,1528	1/1:0,27:27:21.03:448,21,0	0/0:15,0:15:41.75:0,42,340	0/0:3,0:3:6:0,6,52	0/0:39,0:39:92.86:0,93,840	0/0:3,0:3:8.86:0,9,60	0/0:1,0:1:3:0,3,27	0/0:45,0:45:99:0,126,3342	0/0:2,0:2:3:0,3,27	0/0:4,0:4:5.46:0,5,53	0/0:15,0:15:31.24:0,31,375	0/0:5,0:4:9.01:0,9,161
chr10	57489702	.	A	ACAGCAG	2312.86	PASS	AB=1.000;AC=13;AF=0.433;AN=30;BaseQRankSum=-1.516;DP=488;FS=8.956;HRun=0;HaplotypeScore=107.0724;InbreedingCoeff=0.7700;MQ=55.14;MQ0=6;MQRankSum=-6.640;QD=16.88;ReadPosRankSum=-5.148;VQSLOD=0.4328;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	./.	0/1:6,0:6:0:0,0,0	./.	./.	./.	./.	0/0:43,0:46:50.95:0,51,887	./.	1/1:17,15:33:41.98:1340,42,0	./.	./.	0/0:22,0:23:36.10:0,36,659	0/0:23,0:23:36.11:0,36,686	0/0:34,0:35:30.10:0,30,559	1/1:19,8:27:24.08:723,24,0	0/0:21,0:21:3.89:0,4,236	0/0:21,0:21:39.11:0,39,718	0/0:27,0:27:18.06:0,18,246	./.	./.	1/1:40,0:40:3.01:55,3,0	./.	./.	0/0:44,0:44:69.23:0,69,1382	./.	1/1:5,0:5:0.89:2,1,0	1/1:10,7:20:7.27:195,7,0	1/1:6,0:5:6.91:126,7,0
chr10	57489893	.	GA	G	761.83	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.594;DP=738;FS=2.828;HRun=2;HaplotypeScore=75.8652;InbreedingCoeff=0.9837;MQ=83.75;MQ0=0;MQRankSum=-2.219;QD=31.74;ReadPosRankSum=-0.078;VQSLOD=3.2913;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,129,1908	0/0:6,0:6:18.05:0,18,249	0/0:25,0:25:72.23:0,72,1044	0/0:21,0:21:55.86:0,56,799	0/0:17,0:17:42.14:0,42,624	0/0:17,0:17:45.15:0,45,674	0/0:38,0:38:99:0,114,1704	0/0:33,0:33:99:0,99,1484	0/0:25,0:25:75.24:0,75,1103	0/0:24,0:24:72.22:0,72,1056	0/0:14,0:14:42.14:0,42,629	0/0:36,0:36:99:0,105,1568	0/0:33,0:33:99:0,99,1476	0/0:39,0:39:99:0,114,1689	0/0:30,0:30:90.30:0,90,1348	1/1:0,24:24:66.21:857,66,0	0/0:44,0:44:99:0,129,1932	0/0:26,0:26:75.21:0,75,1097	0/0:23,0:23:69.21:0,69,1010	0/0:13,0:13:33.09:0,33,468	0/0:66,0:65:99:0,193,2845	0/0:12,0:12:33.11:0,33,494	0/0:19,0:19:54.17:0,54,791	0/0:39,0:39:99:0,114,1681	0/0:17,0:17:48.15:0,48,701	0/0:28,0:28:84.27:0,84,1223	0/0:20,0:20:60.19:0,60,881	0/0:6,0:6:18.06:0,18,270
chr10	57490009	.	C	CTGA	2120.14	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-9.337;DP=654;FS=7.937;HRun=0;HaplotypeScore=97.1776;InbreedingCoeff=0.9821;MQ=90.36;MQ0=0;MQRankSum=-2.993;QD=50.48;ReadPosRankSum=4.045;VQSLOD=6.1136;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,129,2043	0/0:6,0:6:15.02:0,15,194	0/0:22,0:23:56.81:0,57,766	0/0:28,0:28:62.42:0,62,896	0/0:15,0:15:45.15:0,45,721	0/0:19,0:19:48.15:0,48,743	0/0:25,0:25:72.19:0,72,1102	0/0:34,0:33:78.22:0,78,1164	0/0:28,0:28:81.22:0,81,1208	0/0:23,0:23:60.14:0,60,894	0/0:8,0:8:24.07:0,24,357	0/0:31,0:31:87.27:0,87,1347	0/0:30,0:30:87.23:0,87,1344	0/0:22,0:22:66.20:0,66,1006	0/0:39,0:39:99:0,108,1688	1/1:1,21:22:63.22:1389,63,0	0/0:30,0:30:81.18:0,81,1199	1/1:1,19:20:39.13:852,39,0	0/0:11,0:11:27.07:0,27,391	0/0:12,0:12:33.08:0,33,503	0/0:48,0:48:99:0,135,2081	0/0:18,0:18:45.14:0,45,697	0/0:6,0:6:15.05:0,15,241	0/0:29,0:29:84.22:0,84,1244	0/0:17,0:17:51.15:0,51,770	0/0:27,0:27:78.25:0,78,1211	0/0:26,0:26:75.24:0,75,1180	0/0:14,0:14:42.14:0,42,674
chr10	57490541	.	TGCCTTCCCA	T	454.30	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.955;DP=589;FS=1.570;HRun=0;HaplotypeScore=157.0331;InbreedingCoeff=0.9751;MQ=81.21;MQ0=0;MQRankSum=-4.178;QD=56.79;ReadPosRankSum=0.964;VQSLOD=3.4942;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:75.26:0,75,3609	1/1:1,7:8:18.06:545,18,0	0/0:17,0:17:45.13:0,45,1650	0/0:17,0:17:39.09:0,39,1129	0/0:12,0:12:36.11:0,36,1528	0/0:24,0:24:69.24:0,69,3138	0/0:34,0:34:99:0,102,4817	0/0:25,0:25:66.20:0,66,2593	0/0:18,0:18:51.18:0,51,2363	0/0:18,0:18:54.15:0,54,2302	0/0:8,0:8:24.08:0,24,1045	0/0:36,0:36:99:0,99,4438	0/0:11,0:11:30.09:0,30,1253	0/0:30,0:30:87.28:0,87,3897	0/0:22,0:22:63.16:0,63,2647	0/0:14,0:14:39.13:0,39,1885	0/0:21,0:21:57.18:0,57,2496	0/0:35,0:35:99:0,102,4529	0/0:23,0:23:66.17:0,66,2452	0/0:7,0:7:21.07:0,21,778	0/0:68,0:68:99:0,184,8081	0/0:19,0:19:51.09:0,51,2105	0/0:10,0:10:24.08:0,24,1074	0/0:38,0:38:99:0,111,4794	0/0:15,0:15:42.14:0,42,1825	0/0:15,0:15:42.14:0,42,1889	0/0:11,0:11:33.09:0,33,1355	0/0:6,0:6:18.06:0,18,712
chr10	57494434	.	T	TGAGAGAGAGA	5372.32	PASS	AB=1.000;AC=32;AF=0.571;AN=56;BaseQRankSum=4.316;DP=666;FS=14.202;HRun=0;HaplotypeScore=207.7041;InbreedingCoeff=0.6881;MQ=64.64;MQ0=10;MQRankSum=-8.935;QD=12.44;ReadPosRankSum=-6.390;VQSLOD=0.4389;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:38:27.04:0,27,632	1/1:8,0:9:7.23:26,7,0	0/1:32,0:22:0:0,0,0	0/1:51,0:25:0.02:1,0,0	0/1:11,0:11:7.75:8,0,222	0/0:17,0:17:30.45:0,30,762	0/0:24,0:25:21.07:0,21,542	0/1:34,0:34:34.48:167,0,34	1/1:27,0:28:7.73:118,8,0	1/1:20,1:20:16.30:454,16,0	1/1:18,0:17:2.87:87,3,0	0/0:30,0:32:48.14:0,48,1190	0/0:27,0:28:32.94:0,33,961	0/0:23,0:25:23.22:0,23,590	1/1:33,2:35:15.52:524,16,0	1/1:21,0:27:14.86:207,15,0	1/1:21,0:23:16.05:137,16,0	1/1:12,0:14:12.04:185,12,0	1/1:26,0:25:24.17:561,24,0	1/1:16,0:16:4.10:22,4,0	0/0:21,0:20:0.47:0,0,1	0/0:12,0:13:12.93:0,13,294	0/0:6,0:6:6.02:0,6,158	0/0:28,0:27:36.10:0,36,1004	1/1:23,1:24:14.99:362,15,0	1/1:30,0:29:38.46:1026,38,0	1/1:18,5:23:23.68:896,24,0	1/1:4,3:8:18.01:590,18,0
chr10	57494473	.	TTGTCTGTCTGTC	T	4587.47	PASS	AB=1.000;AC=37;AF=0.661;AN=56;BaseQRankSum=-1.898;DP=670;FS=51.044;HRun=0;HaplotypeScore=190.0032;InbreedingCoeff=0.7765;MQ=51.93;MQ0=35;MQRankSum=-6.930;QD=10.97;ReadPosRankSum=-4.624;VQSLOD=0.4113;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:13,18:29:14.84:100,15,0	1/1:5,0:9:6.74:248,7,0	0/0:54,0:10:0.47:0,0,1	0/1:59,0:11:0:0,0,0	1/1:9,25:33:37:256,37,0	0/0:14,0:23:23.34:0,23,350	0/0:12,0:25:18.04:0,18,354	1/1:24,0:21:3:26,3,0	1/1:7,9:16:20.83:224,21,0	1/1:13,9:22:30.07:689,30,0	1/1:5,10:14:12.44:81,12,0	0/0:17,0:34:20.78:0,21,433	0/0:16,0:27:33.08:0,33,691	0/0:7,0:25:20.67:0,21,484	1/1:9,8:17:8.64:59,9,0	1/1:13,0:13:19.24:330,19,0	1/1:9,0:24:3.01:84,3,0	1/1:5,0:17:3.01:84,3,0	1/1:22,6:25:17.90:288,18,0	1/1:7,9:16:14.67:258,15,0	1/1:14,8:21:5.19:27,5,0	0/0:7,0:15:4.99:0,5,134	0/0:5,0:12:9.03:0,9,231	0/0:13,0:35:27.03:0,27,531	1/1:6,13:19:17.89:239,18,0	1/1:10,15:24:34.95:825,35,0	1/1:6,11:17:18.46:534,18,0	1/1:6,2:8:11.47:234,11,0
chr10	57494511	.	GTCTGTCTGTC	G	1531.61	PASS	AB=0.977;AC=12;AF=0.214;AN=56;BaseQRankSum=10.127;DP=643;FS=7.150;HRun=0;HaplotypeScore=186.9296;InbreedingCoeff=-0.2729;MQ=54.86;MQ0=18;MQRankSum=-5.377;QD=7.03;ReadPosRankSum=6.326;VQSLOD=1.5766;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:53.96:0,54,618	0/1:7,0:7:64.73:168,0,65	0/0:35,0:18:54.16:0,54,703	0/0:25,0:13:39.13:0,39,519	0/0:31,0:30:54.98:0,55,462	0/0:20,0:20:39.02:0,39,572	0/0:33,0:33:66.20:0,66,1100	0/0:23,0:21:31.03:0,31,692	0/1:16,0:16:27.06:27,0,281	0/1:27,0:27:99:266,0,589	0/0:15,0:15:28.49:0,28,317	0/0:33,0:33:53.78:0,54,884	0/0:25,0:25:60.17:0,60,1034	0/0:33,0:33:59.79:0,60,1044	0/0:18,0:18:29.97:0,30,339	0/1:13,6:19:99:137,0,138	0/1:21,0:21:36.99:37,0,255	0/1:19,0:19:41.20:41,0,218	0/1:18,0:13:99:100,0,181	0/1:17,0:17:84.76:85,0,266	0/0:20,0:18:24.03:0,24,292	0/0:21,0:21:45.04:0,45,726	0/0:20,0:20:42.14:0,42,702	0/0:39,0:39:66.16:0,66,1004	0/1:24,1:25:34.36:34,0,384	0/1:22,0:22:99:388,0,263	0/1:20,0:20:99:276,0,258	0/1:7,0:7:64.77:124,0,65
chr10	57496409	.	T	TG	103.23	PASS	AC=2;AF=0.037;AN=54;BaseQRankSum=-1.690;DP=269;FS=3.644;HRun=8;HaplotypeScore=33.4715;InbreedingCoeff=0.4744;MQ=83.00;MQ0=0;MQRankSum=-0.335;QD=14.75;ReadPosRankSum=-0.173;VQSLOD=2.6408;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:47.99:0,48,433	0/0:2,0:2:6:0,6,55	0/0:8,0:8:21:0,21,189	0/0:10,0:9:20.69:0,21,177	0/0:2,0:2:5.99:0,6,50	0/0:6,0:6:12:0,12,110	0/0:20,0:20:48.02:0,48,439	0/0:11,0:11:26.98:0,27,247	0/0:5,0:5:8.99:0,9,82	0/0:3,0:3:9:0,9,80	0/0:5,0:5:8.99:0,9,82	0/0:9,0:9:14.99:0,15,133	0/0:7,0:7:21.01:0,21,192	0/0:12,0:12:23.98:0,24,215	0/0:9,0:9:21.01:0,21,192	1/1:1,6:7:18.01:193,18,0	0/0:23,0:23:47.96:0,48,432	0/0:26,0:26:63.01:0,63,577	0/0:12,0:13:35.04:0,35,302	0/0:4,0:4:9:0,9,82	0/0:19,0:19:45.01:0,45,412	0/0:5,0:5:2.98:0,3,27	0/0:2,0:2:3:0,3,27	0/0:17,0:17:39:0,39,353	0/0:9,0:9:23.98:0,24,210	0/0:4,0:4:6:0,6,55	0/0:10,0:10:17.98:0,18,163	./.
chr10	57502204	.	TG	T	8182.67	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=10.555;DP=784;FS=0.279;HRun=8;HaplotypeScore=81.8510;InbreedingCoeff=0.9951;MQ=72.70;MQ0=0;MQRankSum=-1.201;QD=24.95;ReadPosRankSum=2.353;VQSLOD=5.4928;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,100,1196	0/0:8,0:8:21.06:0,21,254	0/0:20,0:20:12.04:0,12,401	0/0:24,0:24:34.73:0,35,372	0/0:31,0:31:66.20:0,66,790	0/0:28,2:30:52.27:0,52,913	0/0:30,0:30:75.23:0,75,906	0/0:29,0:29:72.21:0,72,858	1/1:1,26:27:72.11:695,72,0	1/1:7,23:30:69.09:661,69,0	1/1:3,20:23:66.11:637,66,0	0/0:34,0:34:99:0,99,1184	0/0:34,0:34:87.23:0,87,1016	0/0:35,0:35:99:0,99,1150	1/1:2,28:30:80.78:782,81,0	0/0:6,1:39:69.01:0,69,472	0/0:30,0:30:81.24:0,81,967	1/1:2,24:26:66.10:637,66,0	1/1:3,18:21:54.08:521,54,0	1/1:1,23:24:66.11:637,66,0	1/1:3,36:39:99:956,99,0	0/0:25,0:25:66.19:0,66,780	0/0:19,0:19:54.17:0,54,652	0/0:31,0:31:84.25:0,84,1002	1/1:3,28:31:81.13:782,81,0	1/1:3,38:41:99:1093,114,0	1/1:0,21:21:51.08:492,51,0	1/1:1,14:15:30.05:290,30,0
chr10	57505022	.	CA	C	289.61	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.221;DP=564;FS=0.904;HRun=9;HaplotypeScore=54.6126;InbreedingCoeff=0.9642;MQ=76.14;MQ0=0;MQRankSum=-0.775;QD=17.04;ReadPosRankSum=1.466;VQSLOD=3.6824;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:63.76:0,64,914	0/0:8,0:8:21.06:0,21,242	0/0:24,0:22:25.72:0,26,416	0/0:18,0:17:13.42:0,13,251	0/0:22,0:22:51.14:0,51,580	0/0:16,0:16:45.13:0,45,518	0/0:13,0:13:39.12:0,39,449	0/0:32,0:32:75.16:0,75,848	0/0:14,0:14:42.09:0,42,464	0/0:19,0:20:53.92:0,54,572	0/0:17,0:17:42.12:0,42,483	0/0:17,0:17:48.14:0,48,554	0/0:18,0:18:48.10:0,48,530	0/0:17,0:17:40.36:0,40,453	0/0:27,0:27:69.18:0,69,777	1/1:3,14:17:42.02:384,42,0	0/0:24,0:24:63.19:0,63,726	0/0:22,0:22:54.63:0,55,624	0/0:21,0:21:48.06:0,48,527	0/0:19,0:19:42.12:0,42,485	0/0:17,0:17:42.11:0,42,475	0/0:20,0:21:57:0,57,638	0/0:23,0:23:60.17:0,60,683	0/0:18,0:18:51.14:0,51,576	0/0:23,0:23:60.18:0,60,692	0/0:31,0:31:81.22:0,81,917	0/0:20,0:20:60.17:0,60,685	0/0:14,1:15:17.67:0,18,457
chr10	57506677	.	CAG	C	1096.98	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.139;DP=708;FS=3.582;HRun=0;HaplotypeScore=85.2724;InbreedingCoeff=0.9968;MQ=72.14;MQ0=0;MQRankSum=-1.129;QD=36.57;ReadPosRankSum=1.195;VQSLOD=5.9373;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:87.28:0,87,1567	0/0:9,0:9:27.09:0,27,485	0/0:19,0:17:50.88:0,51,850	0/0:22,0:22:63.11:0,63,967	0/0:29,0:29:81.26:0,81,1468	0/0:23,0:23:63.13:0,63,1124	0/0:14,0:14:42.14:0,42,786	0/0:34,0:34:96.33:0,96,1788	0/0:25,0:25:69.21:0,69,1205	0/0:31,0:31:87.30:0,87,1595	0/0:23,0:23:66.21:0,66,1202	0/0:24,0:24:66.23:0,66,1219	0/0:19,0:19:48.16:0,48,895	0/0:28,0:28:84.27:0,84,1542	0/0:38,0:38:99:0,108,1988	1/1:1,29:30:81.27:1192,81,0	0/0:45,0:45:99:0,126,2304	0/0:24,0:24:72.25:0,72,1347	0/0:22,0:22:57.15:0,57,1031	0/0:30,0:30:90.31:0,90,1683	0/0:36,0:36:99:0,108,2013	0/0:17,0:17:51.17:0,51,954	0/0:21,0:21:60.21:0,60,1124	0/0:36,0:36:99:0,105,1950	0/0:12,0:12:36.12:0,36,674	0/0:23,0:23:63.21:0,63,1157	0/0:34,0:34:93.31:0,93,1709	0/0:8,0:8:24.08:0,24,449
chr10	57506808	.	A	AAAAT	20246.33	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=6.776;DP=592;FS=0.335;HRun=0;HaplotypeScore=146.0365;InbreedingCoeff=0.9969;MQ=66.73;MQ0=0;MQRankSum=-15.909;QD=59.20;ReadPosRankSum=-4.023;VQSLOD=5.2374;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:60.21:0,60,1051	1/1:3,8:11:27.09:675,27,0	0/0:21,0:20:48.01:0,48,742	0/0:16,0:15:41.14:0,41,654	0/0:17,0:17:45.15:0,45,806	0/0:24,0:24:63.20:0,63,1102	0/0:13,0:13:36.12:0,36,621	1/1:14,20:34:75.24:1730,75,0	1/1:2,15:17:45.15:1136,45,0	1/1:10,22:32:84.28:1999,84,0	1/1:5,24:29:81.28:1971,81,0	0/0:13,0:13:36.12:0,36,647	0/0:21,0:21:57.19:0,57,998	0/0:25,0:25:63.22:0,63,1107	1/1:3,24:26:66.23:1704,66,0	1/1:5,13:18:51.17:1254,51,0	1/1:5,16:21:45.15:1055,45,0	0/0:20,0:20:48.15:0,48,828	1/1:14,12:26:54.18:1274,54,0	1/1:9,23:32:78.27:1928,78,0	1/1:3,5:8:15.05:320,15,0	0/0:8,0:8:21.07:0,21,365	0/0:22,0:22:60.19:0,60,1049	0/0:23,0:23:63.20:0,63,1098	1/1:6,12:18:42.14:1062,42,0	1/1:7,19:26:66.22:1624,66,0	1/1:6,28:34:72.25:1864,72,0	1/1:2,7:9:27.09:651,27,0
chr10	57506820	.	AGAG	A	11925.62	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=15.531;DP=570;FS=2.161;HRun=0;HaplotypeScore=164.1828;InbreedingCoeff=0.9935;MQ=62.21;MQ0=0;MQRankSum=-14.349;QD=31.06;ReadPosRankSum=0.811;VQSLOD=5.0992;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,22:30:35.46:549,35,0	1/1:2,7:9:21.07:301,21,0	0/0:23,0:22:35.99:0,36,639	0/0:19,0:17:23.62:0,24,536	1/1:0,17:17:51.06:682,51,0	0/0:23,0:23:60.21:0,60,1228	0/0:12,0:12:36.12:0,36,741	1/1:17,13:30:40.38:615,40,0	1/1:5,10:15:30.10:438,30,0	1/1:8,24:32:81.26:1153,81,0	1/1:4,24:28:75.25:1089,75,0	0/0:13,0:13:36.12:0,36,746	0/0:21,0:21:57.20:0,57,1154	0/0:23,0:23:66.23:0,66,1339	1/1:6,17:23:54.18:789,54,0	1/1:2,16:18:45.15:661,45,0	1/1:8,12:20:33.11:485,33,0	1/1:2,20:22:42.07:618,42,0	1/1:7,16:23:48.15:689,48,0	1/1:7,26:33:81.17:1138,81,0	1/1:1,6:7:12.03:169,12,0	0/0:10,0:10:27.09:0,27,547	0/0:21,0:21:57.20:0,57,1167	0/0:20,0:20:48.16:0,48,995	1/1:2,16:18:39.13:565,39,0	1/1:4,20:24:60.20:883,60,0	1/1:8,18:26:54.18:792,54,0	1/1:2,7:9:21.07:309,21,0
chr10	57508573	.	C	CAT	563.45	PASS	AB=0.966;AC=21;AF=0.375;AN=56;BaseQRankSum=1.136;DP=438;FS=7.922;HRun=0;HaplotypeScore=95.9149;InbreedingCoeff=0.0626;MQ=36.13;MQ0=25;MQRankSum=4.226;QD=2.26;ReadPosRankSum=-1.030;VQSLOD=0.9587;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:18:4.18:0,4,27	0/0:5,0:5:5.92:0,6,39	0/0:15,0:1:3.01:0,3,33	0/0:19,0:2:3.01:0,3,40	0/1:24,0:23:9.14:41,0,9	0/0:15,0:14:5.74:0,6,48	0/1:11,0:9:1.48:1,0,69	0/0:20,0:19:48.96:0,49,321	1/1:11,0:10:5.94:43,6,0	0/1:24,0:24:99:126,0,159	1/1:14,0:12:8.93:70,9,0	0/0:22,0:22:16.54:0,17,130	0/0:15,0:15:18.42:0,18,115	0/1:17,0:16:0.68:1,0,61	0/1:12,0:12:6.82:34,0,7	0/0:16,0:15:13.05:0,13,72	0/0:15,0:15:20.03:0,20,133	0/1:8,0:8:36.75:37,0,62	0/1:13,1:13:10.16:10,0,115	1/1:5,11:17:2.93:32,3,0	0/1:9,6:15:9.03:22,0,9	1/1:8,0:8:1.55:4,2,0	0/0:9,0:9:2.97:0,3,20	0/0:18,0:17:17.40:0,17,119	1/1:26,0:26:5.89:83,6,0	0/1:29,0:29:95.67:96,0,226	0/1:13,0:13:32.23:65,0,32	0/1:5,0:5:3.10:55,0,3
chr10	57509412	.	ACTCTCTCTCTCTCTCTCT	A	635.65	PASS	AC=4;AF=0.083;AN=48;BaseQRankSum=2.434;DP=471;FS=0.000;HRun=0;HaplotypeScore=205.9652;InbreedingCoeff=0.6076;MQ=70.77;MQ0=12;MQRankSum=-3.191;QD=12.22;ReadPosRankSum=-2.904;VQSLOD=1.8580;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:20,8:28:12.04:562,12,0	0/0:9,0:7:2.97:0,3,44	0/0:26,0:18:3.48:0,3,99	0/0:29,0:17:3.48:0,3,47	1/1:17,7:23:6.02:176,6,0	0/0:22,0:22:24.08:0,24,1732	0/0:31,0:31:31.90:0,32,2225	0/0:24,0:23:11.63:0,12,461	0/0:15,0:17:18.06:0,18,650	0/0:13,0:12:17.64:0,18,427	./.	0/0:12,0:12:12.04:0,12,841	0/0:7,0:9:20.50:0,21,1122	0/0:12,0:12:17.42:0,17,1317	0/0:10,0:14:27.09:0,27,1089	0/0:15,0:19:30.09:0,30,905	0/0:18,0:27:27.04:0,27,1440	0/0:15,0:14:12:0,12,434	0/0:16,0:17:16.86:0,17,568	./.	0/0:26,0:26:36.12:0,36,1510	0/0:17,0:17:14.72:0,15,967	0/0:9,0:8:3.01:0,3,90	0/0:21,0:21:37.68:0,38,2621	./.	0/0:13,0:14:24.07:0,24,850	0/0:9,0:13:20.40:0,20,759	./.
chr10	57509468	.	C	CT	3233.06	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=-7.813;DP=527;FS=28.297;HRun=9;HaplotypeScore=78.3539;InbreedingCoeff=0.8491;MQ=61.28;MQ0=6;MQRankSum=0.583;QD=14.76;ReadPosRankSum=1.041;VQSLOD=1.9943;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:95.95:0,96,826	0/0:6,0:6:12:0,12,104	0/0:30,0:15:41.93:0,42,351	0/1:36,0:13:14.99:15,0,102	0/0:21,0:20:56.97:0,57,490	0/0:24,0:24:62.99:0,63,547	0/0:23,0:23:53.68:0,54,460	0/0:18,0:17:8.82:0,9,305	1/1:5,10:15:29.70:274,30,0	1/1:3,13:16:39.11:431,39,0	1/1:4,8:12:15:153,15,0	0/0:16,0:16:37.79:0,38,313	0/0:16,0:16:41.99:0,42,364	0/0:13,0:13:26.84:0,27,234	1/1:7,19:26:25.01:443,25,0	0/0:18,0:18:47.97:0,48,412	0/0:22,0:22:35.98:0,36,312	0/0:17,0:16:37.80:0,38,301	1/1:6,14:20:19.04:423,19,0	1/1:4,7:10:15:150,15,0	1/1:6,12:17:1.03:239,1,0	0/0:11,0:11:20.99:0,21,182	0/0:7,0:7:17.99:0,18,156	0/0:29,0:29:66.29:0,66,565	1/1:2,13:15:27.07:297,27,0	1/1:5,19:23:50.73:541,51,0	1/1:11,10:22:49.17:447,49,0	1/1:0,4:4:3.01:33,3,0
chr10	57510531	.	CTT	C	1011.13	PASS	AB=0.900;AC=8;AF=0.143;AN=56;BaseQRankSum=4.580;DP=535;FS=0.545;HRun=15;HaplotypeScore=66.5143;InbreedingCoeff=0.7118;MQ=68.33;MQ0=0;MQRankSum=2.089;QD=10.01;ReadPosRankSum=6.220;VQSLOD=1.7432;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,22:34:62.66:542,63,0	0/1:6,1:8:14.91:15,0,76	0/0:11,0:6:8.73:0,9,60	0/1:12,0:12:3.82:4,0,34	1/1:11,13:26:22.33:253,22,0	0/0:20,0:20:35.98:0,36,365	0/0:19,0:25:48.14:0,48,619	0/0:12,0:25:21.43:0,21,108	0/0:16,0:17:50.58:0,51,596	0/0:15,0:15:33:0,33,362	0/0:24,0:24:39:0,39,452	0/0:17,0:17:39.06:0,39,452	0/0:12,0:12:24.07:0,24,306	0/0:18,1:19:15.62:0,16,407	0/0:12,0:18:29.66:0,30,341	0/0:21,0:21:45.10:0,45,539	0/0:19,1:36:45.35:0,45,349	1/1:4,15:21:27.68:347,28,0	0/0:27,1:30:17.07:0,17,424	0/0:14,1:16:12.62:0,13,410	0/0:22,0:22:42.05:0,42,484	0/0:8,0:10:17.01:0,17,153	0/0:10,0:10:23.98:0,24,267	0/0:17,0:18:50.59:0,51,592	0/0:14,0:15:38.57:0,39,463	0/0:17,0:19:53.06:0,53,600	0/0:22,0:29:63.05:0,63,718	0/0:5,0:5:15.01:0,15,150
chr10	57510863	.	A	AC	898.97	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-7.643;DP=759;FS=6.777;HRun=2;HaplotypeScore=70.5920;InbreedingCoeff=0.9450;MQ=77.40;MQ0=0;MQRankSum=-2.286;QD=31.00;ReadPosRankSum=1.694;VQSLOD=3.1554;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:90.26:0,90,1101	0/0:12,0:12:36.11:0,36,446	0/0:40,0:37:99:0,108,1295	0/0:28,0:27:67.04:0,67,790	0/0:19,0:19:57.18:0,57,704	0/0:16,0:16:45.11:0,45,531	0/0:36,0:36:96.27:0,96,1164	0/0:37,0:37:99:0,111,1376	0/0:35,0:35:99:0,102,1265	0/0:20,0:20:57.18:0,57,707	0/0:22,0:22:63.18:0,63,781	0/0:36,0:36:99:0,105,1276	0/0:35,0:35:93.26:0,93,1136	0/0:23,0:23:63.20:0,63,780	0/0:40,0:40:99:0,117,1450	1/1:3,26:29:69.23:994,69,0	0/0:36,0:34:99:0,108,1339	0/0:16,0:16:45.14:0,45,557	0/0:28,0:28:81.20:0,81,957	0/0:18,0:18:51.16:0,51,632	0/0:66,0:66:99:0,190,2330	0/0:24,0:24:72.23:0,72,893	0/0:17,0:17:51.16:0,51,632	0/0:19,0:19:57.18:0,57,707	0/0:12,0:12:36.10:0,36,434	0/0:31,0:31:90.27:0,90,1104	0/0:27,0:26:78.21:0,78,940	0/0:3,0:3:9.03:0,9,112
chr10	57513246	.	T	TAA	6351.11	PASS	AB=0.988;AC=38;AF=0.679;AN=56;BaseQRankSum=1.747;DP=590;FS=1.499;HRun=14;HaplotypeScore=102.5698;InbreedingCoeff=0.8143;MQ=80.66;MQ0=4;MQRankSum=-2.453;QD=13.96;ReadPosRankSum=-2.776;VQSLOD=3.4560;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,27:34:59.92:715,60,0	1/1:3,9:13:24.06:290,24,0	0/1:39,0:26:39.49:39,0,48	0/1:37,0:23:23.62:24,0,54	1/1:9,7:19:38.42:423,38,0	0/0:16,0:20:29.55:0,30,318	0/0:10,0:10:26.93:0,27,226	1/1:25,3:27:28.34:279,28,0	1/1:2,6:9:9.02:107,9,0	1/1:10,7:20:20.40:216,20,0	1/1:9,13:25:38.52:400,39,0	0/0:16,0:18:34.96:0,35,265	0/0:8,0:8:17.97:0,18,151	0/0:23,0:23:44.61:0,45,407	1/1:4,11:16:22.80:253,23,0	1/1:13,0:24:60.02:575,60,0	1/1:20,8:31:38.89:652,39,0	1/1:2,9:15:22.29:222,22,0	1/1:16,2:20:39.76:343,40,0	1/1:8,12:21:40.46:382,40,0	1/1:1,7:12:17.41:194,17,0	0/0:17,0:16:21.18:0,21,174	0/0:18,0:22:32.08:0,32,285	0/0:15,0:17:11.32:0,11,170	1/1:4,15:22:17.41:183,17,0	1/1:13,9:25:42.56:490,43,0	1/1:6,14:21:21.53:254,22,0	1/1:5,5:16:27.06:310,27,0
chr10	57513276	.	A	AT	356.16	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=3.047;DP=558;FS=4.188;HRun=8;HaplotypeScore=89.8963;InbreedingCoeff=0.6328;MQ=79.04;MQ0=4;MQRankSum=0.532;QD=6.48;ReadPosRankSum=-0.945;VQSLOD=0.8514;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:51:0,51,467	0/0:10,0:10:24.01:0,24,219	0/0:35,0:25:16.95:0,17,212	0/1:32,0:23:21.27:21,0,292	0/0:22,0:22:57.02:0,57,521	0/0:26,0:26:66.01:0,66,604	0/0:15,0:15:39.01:0,39,357	0/0:21,0:21:51.02:0,51,467	0/0:11,0:11:24.01:0,24,219	0/0:20,0:20:51.03:0,51,467	0/0:21,0:21:47.90:0,48,439	0/0:13,0:13:32.99:0,33,295	0/0:8,0:8:24.01:0,24,219	0/0:16,0:16:39:0,39,353	0/0:18,0:18:36:0,36,329	1/1:11,11:22:39.11:441,39,0	0/0:30,0:30:68.93:0,69,618	0/0:28,0:28:65.99:0,66,596	0/0:22,0:21:47.99:0,48,433	0/0:21,0:21:45.01:0,45,412	0/0:14,0:14:30.01:0,30,271	0/0:16,0:16:42.02:0,42,384	0/0:18,0:18:39:0,39,357	0/0:15,0:15:33:0,33,302	0/0:18,0:18:14.98:0,15,137	0/0:20,0:20:24.16:0,24,359	0/0:17,0:16:32.94:0,33,288	0/0:16,0:16:30.01:0,30,274
chr10	57514492	.	TGTGCTGGC	T	12036.40	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=14.019;DP=399;FS=0.000;HRun=0;HaplotypeScore=133.3941;InbreedingCoeff=0.9626;MQ=82.35;MQ0=0;MQRankSum=-14.294;QD=70.39;ReadPosRankSum=-0.319;VQSLOD=4.4029;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:81.28:0,81,3632	1/1:0,5:5:9.03:271,9,0	0/0:12,0:10:14.80:0,15,357	0/0:19,0:19:32.09:0,32,1165	0/0:26,0:26:78.27:0,78,3473	0/0:8,0:8:24.08:0,24,1034	0/0:14,0:14:42.14:0,42,1825	1/1:0,15:15:45.07:1152,45,0	1/1:2,9:11:29.98:755,30,0	1/1:1,15:16:45.10:1221,45,0	1/1:1,7:8:18.06:540,18,0	0/0:14,0:14:42.14:0,42,1752	0/0:13,0:13:39.13:0,39,1780	0/0:13,0:13:33.08:0,33,1515	1/1:1,12:13:36.12:1083,36,0	0/0:12,0:12:36.12:0,36,1657	1/1:0,16:16:24.08:721,24,0	0/0:15,0:15:36.12:0,36,1553	1/1:0,14:14:39.02:777,39,0	1/1:0,15:15:36.12:1082,36,0	1/1:2,3:5:3.01:90,3,0	0/0:9,0:9:24.08:0,24,1110	0/0:18,0:18:54.19:0,54,2484	0/0:18,0:18:51.17:0,51,2132	1/1:2,11:13:36.11:997,36,0	1/1:0,20:20:54.19:1625,54,0	1/1:2,12:14:42.13:1182,42,0	1/1:0,6:6:18.06:543,18,0
chr10	57514533	.	T	TCC	1473.59	PASS	AB=0.978;AC=13;AF=0.232;AN=56;BaseQRankSum=5.930;DP=475;FS=0.479;HRun=0;HaplotypeScore=102.7553;InbreedingCoeff=0.0412;MQ=57.21;MQ0=16;MQRankSum=-6.524;QD=8.82;ReadPosRankSum=3.826;VQSLOD=3.3167;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:70.89:0,71,729	0/0:7,0:7:18.51:0,19,242	0/0:14,0:5:8.93:0,9,69	0/0:10,0:5:4.74:0,5,19	0/0:21,0:21:15.98:0,16,402	0/0:15,0:15:32.98:0,33,403	0/0:20,0:20:50.46:0,50,619	0/0:25,0:22:53.49:0,53,654	0/1:8,1:9:74.48:85,0,74	0/1:17,0:16:41.69:161,0,42	0/1:15,0:15:36.89:128,0,37	0/0:17,0:16:34.29:0,34,401	0/0:16,0:15:17.13:0,17,341	0/0:17,0:17:45.03:0,45,590	0/1:13,0:12:34.11:115,0,34	0/0:11,0:11:23.88:0,24,247	0/0:28,0:27:60.16:0,60,695	0/0:20,0:17:38.98:0,39,406	0/1:15,0:12:25.57:109,0,26	0/1:17,0:17:99:179,0,142	1/1:6,0:4:2.93:29,3,0	0/0:13,0:13:33.08:0,33,452	0/0:16,0:15:42:0,42,562	0/0:18,0:18:34.19:0,34,389	1/1:14,1:15:9.24:206,9,0	0/1:21,0:21:99:241,0,174	0/1:19,1:20:99:224,0,151	0/1:17,1:16:6.19:151,0,6
chr10	57514534	.	T	TCCC	5816.50	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=2.834;DP=492;FS=28.693;HRun=3;HaplotypeScore=115.6445;InbreedingCoeff=0.8875;MQ=55.60;MQ0=16;MQRankSum=-9.453;QD=29.68;ReadPosRankSum=-2.190;VQSLOD=0.9701;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:72.19:0,72,902	0/0:7,0:7:18.06:0,18,268	0/0:10,0:4:2.73:0,3,16	0/0:9,0:5:3.33:0,3,9	0/0:21,0:21:39.11:0,39,528	0/0:15,0:15:29.36:0,29,404	0/0:18,0:18:42.08:0,42,625	0/0:24,0:21:43.77:0,44,637	1/1:7,3:10:24.06:395,24,0	1/1:13,8:21:51.12:883,51,0	1/1:15,1:17:19.04:299,19,0	0/0:15,0:15:27.09:0,27,402	0/0:14,0:13:24.06:0,24,349	0/0:16,0:16:36.03:0,36,514	1/1:3,11:14:27.07:464,27,0	0/0:1,0:11:17.78:0,18,120	0/0:28,0:27:37.70:0,38,653	0/0:19,0:16:36.06:0,36,427	1/1:18,4:18:21.60:692,22,0	1/1:18,2:21:35.32:546,35,0	1/1:7,1:6:3.01:43,3,0	0/0:14,0:14:36.09:0,36,506	0/0:16,0:15:33.04:0,33,488	0/0:17,0:17:24.03:0,24,341	1/1:4,12:16:27.09:507,27,0	1/1:16,5:23:51.16:882,51,0	1/1:10,11:22:5.58:790,6,0	1/1:7,11:17:4.88:316,5,0
chr10	57515637	.	AGAGAGAGAGAGAGAGAGAGAGAGAG	A	680.29	PASS	AB=1.000;AC=3;AF=0.056;AN=54;BaseQRankSum=3.046;DP=501;FS=2.995;HRun=0;HaplotypeScore=203.2302;InbreedingCoeff=0.5221;MQ=45.52;MQ0=75;MQRankSum=-2.897;QD=14.47;ReadPosRankSum=-1.125;VQSLOD=2.0463;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:15:18.06:0,18,460	0/0:4,0:4:5.72:0,6,387	./.	0/0:10,0:3:6.02:0,6,89	0/0:22,0:18:30.08:0,30,1282	0/0:18,0:16:36.12:0,36,1999	0/0:16,0:11:17.47:0,17,259	0/0:14,0:12:26.56:0,27,715	0/0:24,0:19:37.37:0,37,1731	0/0:24,0:18:51.17:0,51,2998	0/0:14,0:14:38.83:0,39,1798	0/0:17,0:16:42.19:0,42,1978	0/0:13,0:13:26.55:0,27,1443	0/0:13,0:12:27.09:0,27,1389	0/1:19,0:16:48.16:48,0,853	1/1:5,23:27:14.96:733,15,0	0/0:12,0:8:19.30:0,19,662	0/0:24,0:12:33.08:0,33,1177	0/0:14,0:9:26.56:0,27,947	0/0:19,0:13:31.64:0,32,1198	0/0:23,0:16:32.32:0,32,1513	0/0:16,0:13:21.06:0,21,640	0/0:17,0:16:42.14:0,42,1579	0/0:24,0:21:39.13:0,39,1403	0/0:27,0:20:33.58:0,34,1842	0/0:25,0:19:42.12:0,42,2511	0/0:31,0:18:39.75:0,40,1564	0/0:5,0:4:12.04:0,12,531
chr10	57515666	.	GA	G	3170.46	PASS	AB=0.768;AC=31;AF=0.574;AN=54;BaseQRankSum=5.267;DP=627;FS=150.023;HRun=2;HaplotypeScore=55.5958;InbreedingCoeff=0.5937;MQ=38.27;MQ0=112;MQRankSum=-0.139;QD=8.48;ReadPosRankSum=-0.586;VQSLOD=0.0366;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,21:10:11.91:152,12,0	./.	0/0:51,1:6:5.16:0,5,94	0/0:67,0:7:15.05:0,15,196	1/1:7,12:12:14.79:190,15,0	0/0:21,0:19:51.57:0,52,639	0/0:16,0:13:35.86:0,36,427	1/1:11,19:17:16.19:273,16,0	1/1:12,11:12:12.92:154,13,0	0/1:12,16:19:1.27:477,0,1	1/1:4,7:9:18.02:213,18,0	0/0:16,0:16:41.76:0,42,562	0/0:19,0:19:45.12:0,45,580	0/0:12,0:11:33.11:0,33,438	1/1:6,15:15:7.03:144,7,0	0/1:27,0:26:4.82:5,0,29	1/1:2,8:6:15.05:190,15,0	1/1:7,10:5:9.03:114,9,0	0/1:6,14:11:28.05:126,0,28	1/1:6,12:11:19.62:264,20,0	0/1:9,15:15:24.26:206,0,24	0/1:14,0:13:8.39:8,0,308	0/0:19,0:18:50.70:0,51,623	0/0:28,0:25:51.53:0,52,619	1/1:8,22:21:31.92:417,32,0	1/1:22,1:16:20.95:216,21,0	1/1:9,15:9:12.51:148,13,0	1/1:1,6:4:2.09:70,2,0
chr10	57515667	.	A	AG	3098.04	PASS	AB=0.929;AC=30;AF=0.556;AN=54;BaseQRankSum=6.077;DP=619;FS=146.413;HRun=1;HaplotypeScore=55.1258;InbreedingCoeff=0.5313;MQ=38.33;MQ0=110;MQRankSum=1.132;QD=8.61;ReadPosRankSum=-1.420;VQSLOD=0.2475;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:25,3:10:11.91:152,12,0	./.	0/0:54,0:7:4.49:0,4,92	0/0:70,0:7:15.05:0,15,196	1/1:15,3:13:14.79:190,15,0	0/0:19,0:19:51.57:0,52,643	0/0:17,0:14:35.86:0,36,429	0/1:28,3:18:5.35:256,0,5	1/1:15,6:10:13.28:155,13,0	0/1:20,6:17:8.36:477,0,8	1/1:10,1:9:17.39:182,17,0	0/0:16,0:16:42.06:0,42,560	0/0:19,0:19:45.12:0,45,584	0/0:12,0:11:33.11:0,33,440	1/1:17,3:14:7.31:115,7,0	0/1:26,0:25:4.92:5,0,49	1/1:9,1:6:15.05:190,15,0	1/1:13,4:5:9.03:114,9,0	0/1:21,0:12:78.83:122,0,79	1/1:15,3:11:19.62:265,20,0	0/1:19,4:14:20.60:206,0,21	0/1:14,0:13:8.40:8,0,310	0/0:19,0:18:51.02:0,51,640	0/0:27,0:24:51.53:0,52,623	1/1:23,3:17:32.55:418,33,0	1/1:5,16:14:19.39:213,19,0	1/1:19,3:7:12.92:149,13,0	1/1:7,0:4:6.49:77,6,0
chr10	57515895	.	C	CAAAT	28254.08	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-14.182;DP=673;FS=3.974;HRun=0;HaplotypeScore=89.9985;InbreedingCoeff=0.9610;MQ=63.19;MQ0=1;MQRankSum=-5.934;QD=59.23;ReadPosRankSum=1.137;VQSLOD=6.5471;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,28:32:69.15:1735,69,0	1/1:2,3:5:9.03:239,9,0	0/0:16,0:14:2.19:0,2,498	0/0:17,0:15:25.12:0,25,408	1/1:9,44:54:99:3011,120,0	0/0:22,0:22:60.17:0,60,1056	0/0:19,0:19:51.17:0,51,944	1/1:7,25:33:84.24:1903,84,0	1/1:0,13:13:39.13:1017,39,0	1/1:4,26:32:87.25:2095,87,0	1/1:3,27:32:84.11:1955,84,0	0/0:19,0:19:48.15:0,48,829	0/0:16,0:16:39.10:0,39,650	0/0:29,0:29:81.28:0,81,1483	1/1:2,21:23:57.20:1454,57,0	1/1:1,21:23:42.14:1118,42,0	1/1:7,17:26:48.08:1204,48,0	1/1:1,16:17:36.12:938,36,0	1/1:2,25:27:69.22:1682,69,0	1/1:2,30:32:93.28:2286,93,0	1/1:2,10:13:24.08:616,24,0	0/0:17,0:17:45.12:0,45,767	0/0:25,0:25:72.23:0,72,1311	0/0:16,0:16:39.08:0,39,660	1/1:1,37:38:96.33:2554,96,0	1/1:1,24:26:78.24:1863,78,0	1/1:4,30:35:75.26:1964,75,0	1/1:3,8:11:24.08:620,24,0
chr10	57516946	.	GT	G	794.85	PASS	AB=0.833;AC=25;AF=0.446;AN=56;BaseQRankSum=-2.067;DP=423;FS=6.558;HRun=15;HaplotypeScore=83.8111;InbreedingCoeff=0.3764;MQ=77.21;MQ0=16;MQRankSum=2.243;QD=3.66;ReadPosRankSum=4.905;VQSLOD=0.6893;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:33.47:0,33,253	0/1:4,1:5:7.30:7,0,61	0/0:35,0:19:13.50:0,14,143	0/0:31,1:18:2.21:0,2,57	0/0:22,0:21:20.79:0,21,139	0/0:14,1:16:27.28:0,27,170	0/1:13,2:15:11.77:12,0,145	0/1:26,1:23:2.57:3,0,212	1/1:10,4:14:5.80:38,6,0	1/1:13,2:15:14.66:95,15,0	1/1:6,2:8:17.69:113,18,0	0/0:10,0:9:11.21:0,11,74	0/1:8,0:9:0.18:0,0,75	0/0:8,0:8:8.73:0,9,62	1/1:8,4:11:17.63:115,18,0	1/1:10,0:16:9.61:29,10,0	0/0:22,0:22:24.25:0,24,151	1/1:10,5:13:11.45:72,11,0	0/1:8,0:8:5.95:49,0,6	0/1:8,4:13:0.83:113,0,1	0/1:9,2:13:8.59:33,0,9	0/0:18,0:19:31.50:0,31,194	0/0:10,0:10:5.05:0,5,19	0/0:8,0:6:11.98:0,12,101	1/1:7,6:15:2.43:110,2,0	0/1:5,5:10:8.66:78,0,9	0/1:7,4:12:5.03:50,0,5	1/1:0,7:7:8.87:58,9,0
chr10	57516964	.	TTC	T	653.17	PASS	AB=0.944;AC=12;AF=0.214;AN=56;BaseQRankSum=3.405;DP=371;FS=23.087;HRun=0;HaplotypeScore=55.0063;InbreedingCoeff=-0.2863;MQ=51.22;MQ0=37;MQRankSum=-5.796;QD=3.46;ReadPosRankSum=1.415;VQSLOD=0.4744;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:24,1:21:69.28:69,0,195	0/0:4,0:4:0.74:0,1,46	0/0:26,0:8:11.60:0,12,91	0/0:23,0:6:2.21:0,2,28	0/1:21,2:22:24.95:117,0,25	0/1:13,0:13:7.32:61,0,7	0/0:14,0:12:15.57:0,16,133	0/1:21,0:17:81.35:98,0,81	0/0:10,0:10:10.75:0,11,87	0/0:12,0:11:17.27:0,17,135	0/0:8,0:7:4.36:0,4,92	0/1:11,1:10:9.41:56,0,9	0/1:7,1:8:33.19:33,0,39	0/1:9,0:9:10.10:33,0,10	0/0:10,0:9:6.68:0,7,90	0/1:15,0:14:56.86:57,0,74	0/1:23,0:19:17.15:120,0,17	0/1:15,0:11:31.73:75,0,32	0/0:8,0:5:5.80:0,6,72	0/0:13,0:12:28.55:0,29,173	0/0:8,0:8:11.58:0,12,72	0/1:13,0:11:35.83:41,0,36	0/1:5,7:11:19.38:35,0,19	0/0:8,0:5:4.47:0,4,16	0/0:16,0:15:35.42:0,35,239	0/0:6,0:6:16.16:0,16,112	0/0:7,0:7:5.70:0,6,73	0/0:9,0:8:6.80:0,7,29
chr10	57516980	.	T	TGGTTC	866.61	PASS	AB=0.786;AC=16;AF=0.308;AN=52;BaseQRankSum=-2.019;DP=352;FS=0.000;HRun=0;HaplotypeScore=71.9680;InbreedingCoeff=0.4408;MQ=30.89;MQ0=83;MQRankSum=-1.478;QD=10.70;ReadPosRankSum=-0.266;VQSLOD=1.7726;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:23:58.72:0,59,1056	0/0:7,0:6:15.02:0,15,260	./.	0/0:15,0:2:6:0,6,54	0/0:22,0:21:51.16:0,51,878	0/0:15,0:14:39.09:0,39,697	0/0:9,0:7:21.07:0,21,405	0/0:23,0:17:51.06:0,51,810	1/1:4,0:2:6.01:87,6,0	1/1:7,0:7:5.75:59,6,0	1/1:3,1:3:3.01:74,3,0	0/0:15,0:10:26.81:0,27,444	0/0:8,0:6:15.05:0,15,268	0/0:12,0:10:27.09:0,27,502	1/1:3,4:7:3.01:74,3,0	0/0:12,0:10:24.05:0,24,392	0/0:34,0:23:43.42:0,43,773	0/0:18,0:13:31.26:0,31,624	0/1:8,0:3:12.65:13,0,14	0/1:10,2:12:10.42:104,0,10	./.	0/0:9,0:7:21.07:0,21,387	0/0:12,0:11:18.06:0,18,322	0/0:16,0:8:15.01:0,15,296	0/1:10,4:10:15.92:222,0,16	0/1:3,5:6:21.31:269,0,21	1/1:5,0:3:2.75:79,3,0	1/1:7,0:3:2.89:43,3,0
chr10	57517066	.	C	CCCT	524.32	PASS	AB=0.806;AC=10;AF=0.227;AN=44;BaseQRankSum=2.999;DP=278;FS=1.052;HRun=0;HaplotypeScore=63.0559;InbreedingCoeff=0.2483;MQ=71.21;MQ0=29;MQRankSum=-3.894;QD=8.19;ReadPosRankSum=-3.124;VQSLOD=1.3295;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,1:19:1.36:0,1,541	0/0:2,0:2:3.01:0,3,51	0/1:21,0:11:25.97:26,0,252	0/1:21,0:9:10.84:11,0,111	0/0:20,0:20:31:0,31,668	0/0:9,0:8:24.08:0,24,409	0/0:22,0:21:52.06:0,52,864	0/0:16,0:14:38.60:0,39,596	./.	1/1:1,0:1:3.01:41,3,0	./.	0/0:13,0:12:36.08:0,36,583	0/0:8,0:7:18.06:0,18,307	0/0:7,0:7:21.06:0,21,332	0/0:2,1:3:3.01:0,3,47	./.	0/0:27,0:25:21.06:0,21,357	0/0:16,0:13:39.07:0,39,605	0/1:4,5:7:28.98:250,0,29	1/1:1,4:5:9.03:198,9,0	./.	0/0:3,0:2:6.02:0,6,102	0/0:15,0:14:36.12:0,36,603	0/0:17,0:15:42.10:0,42,685	./.	0/1:2,2:2:17.33:61,0,17	./.	1/1:0,1:1:3.01:67,3,0
chr10	57517068	.	C	CAT	106.20	PASS	AB=0.893;AC=6;AF=0.143;AN=42;BaseQRankSum=3.202;DP=262;FS=0.000;HRun=0;HaplotypeScore=64.7454;InbreedingCoeff=0.1036;MQ=73.13;MQ0=24;MQRankSum=-1.666;QD=1.97;ReadPosRankSum=-2.881;VQSLOD=0.7303;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:18:29.69:0,30,590	0/0:2,0:2:3.01:0,3,49	0/1:22,0:11:13.04:13,0,218	0/0:22,0:9:9.25:0,9,138	0/0:19,0:19:45.05:0,45,700	0/0:9,0:8:24.08:0,24,392	0/0:18,0:17:51.17:0,51,832	0/1:14,1:14:19.86:20,0,519	./.	./.	./.	0/0:12,0:12:36.12:0,36,578	0/0:8,0:7:18.06:0,18,294	0/0:7,0:7:21.07:0,21,340	0/0:3,0:3:3.01:0,3,46	./.	0/0:26,0:25:20.84:0,21,342	0/0:15,0:13:39.13:0,39,619	0/1:6,2:6:60.97:100,0,61	1/1:4,0:4:8.10:35,8,0	./.	0/0:3,0:2:6.02:0,6,98	0/0:15,0:14:39.13:0,39,631	0/0:16,0:15:42.10:0,42,656	./.	0/1:4,1:2:14.28:53,0,14	./.	0/0:1,0:1:2.74:0,3,12
chr10	57517085	.	TG	T	590.55	PASS	AB=0.960;AC=17;AF=0.447;AN=38;BaseQRankSum=7.222;DP=253;FS=3.163;HRun=1;HaplotypeScore=58.9164;InbreedingCoeff=0.3819;MQ=74.76;MQ0=8;MQRankSum=-5.612;QD=3.56;ReadPosRankSum=-1.989;VQSLOD=-0.4806;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:16,2:17:23.56:184,24,0	1/1:4,0:4:0.94:2,1,0	0/1:30,0:11:4.49:4,0,47	0/1:28,1:12:20.67:21,0,36	0/1:17,1:18:15.27:82,0,15	0/0:11,0:11:33.07:0,33,396	0/0:20,0:20:50.86:0,51,669	1/1:11,0:10:20.57:119,21,0	./.	./.	./.	0/0:14,0:14:26.63:0,27,314	0/0:6,0:6:12.03:0,12,150	0/0:12,0:12:26.94:0,27,268	0/0:2,0:2:2.74:0,3,12	./.	0/1:26,0:26:8.38:113,0,8	1/1:15,0:14:32.07:154,32,0	./.	./.	1/1:2,0:2:5.69:31,6,0	0/0:2,0:2:6:0,6,62	0/1:10,1:11:2.57:3,0,164	0/0:18,0:18:42.87:0,43,502	./.	./.	1/1:1,0:1:2.96:19,3,0	./.
chr10	57517100	.	T	TC	720.24	PASS	AB=0.954;AC=8;AF=0.222;AN=36;BaseQRankSum=2.294;DP=205;FS=5.915;HRun=5;HaplotypeScore=50.2151;InbreedingCoeff=0.5967;MQ=67.55;MQ0=9;MQRankSum=-2.475;QD=8.09;ReadPosRankSum=-0.491;VQSLOD=-0.3433;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,11:16:30.09:371,30,0	0/0:4,0:4:6.02:0,6,64	0/1:19,0:8:0:0,0,0	0/1:19,0:10:14.23:14,0,32	1/1:5,7:11:9.03:113,9,0	0/0:10,0:10:27.06:0,27,283	0/0:18,0:18:42.06:0,42,437	0/0:12,0:8:14.92:0,15,136	./.	./.	./.	0/0:7,0:7:18.04:0,18,186	0/0:1,0:1:3.01:0,3,32	0/0:9,0:9:24.05:0,24,248	0/0:1,0:1:2.04:0,2,6	./.	0/0:22,0:22:42:0,42,409	1/1:9,9:18:27.37:346,27,0	./.	./.	./.	0/0:2,0:2:6.02:0,6,64	0/0:9,0:9:18.04:0,18,193	0/0:17,0:17:39.09:0,39,416	0/0:0,0:1:2.04:0,2,6	./.	./.	./.
chr10	57517556	.	T	TA	1232.46	PASS	AB=0.909;AC=7;AF=0.125;AN=56;BaseQRankSum=-7.639;DP=512;FS=1.937;HRun=10;HaplotypeScore=50.5433;InbreedingCoeff=0.8407;MQ=76.78;MQ0=0;MQRankSum=-1.881;QD=18.67;ReadPosRankSum=2.443;VQSLOD=4.2852;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,17:20:50.79:508,51,0	0/0:10,0:10:26.93:0,27,218	0/0:14,0:15:15.54:0,16,107	0/0:13,0:13:12.95:0,13,76	1/1:2,19:21:48.12:512,48,0	0/0:25,0:24:62.89:0,63,511	0/0:21,0:21:56.91:0,57,465	0/0:39,1:40:72.88:0,73,803	0/0:15,0:15:32.93:0,33,271	0/0:18,0:18:38.93:0,39,320	0/0:18,0:18:35.94:0,36,296	0/0:15,0:16:37.99:0,38,301	0/0:17,0:17:41.93:0,42,345	0/0:20,0:20:32.92:0,33,271	0/0:24,0:24:53.89:0,54,440	0/0:17,0:18:49.95:0,50,397	0/0:19,0:20:52.98:0,53,425	1/1:1,14:15:33.08:351,33,0	0/0:15,0:15:32.95:0,33,271	0/0:18,0:18:47.94:0,48,394	0/1:9,1:10:8.03:8,0,146	0/0:12,0:12:26.96:0,27,222	0/0:13,0:14:34.99:0,35,277	0/0:12,0:12:29.95:0,30,246	0/0:20,0:20:59.91:0,60,489	0/0:21,1:22:15.92:0,16,335	0/0:29,0:29:64.90:0,65,523	0/0:13,0:13:34.99:0,35,277
chr10	57523260	.	CACCTAG	C	423.88	PASS	AB=0.972;AC=18;AF=0.346;AN=52;BaseQRankSum=4.128;DP=222;FS=27.977;HRun=0;HaplotypeScore=55.4980;InbreedingCoeff=0.2738;MQ=93.41;MQ0=0;MQRankSum=-2.049;QD=4.08;ReadPosRankSum=-0.497;VQSLOD=0.0478;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:49.43:0,49,715	./.	0/0:14,0:12:36.09:0,36,847	0/1:19,0:17:0.38:0,0,756	0/0:5,0:5:9.55:0,10,196	0/0:6,0:6:18.06:0,18,666	0/0:11,0:11:30.10:0,30,851	0/1:8,0:8:22.85:23,0,96	0/1:4,0:4:14.40:14,0,117	1/1:5,0:5:6.61:50,7,0	0/0:5,0:5:2.39:0,2,45	0/0:15,0:15:33.10:0,33,906	0/0:6,0:6:11.91:0,12,303	0/0:8,0:8:21.06:0,21,585	1/1:4,0:4:6.02:84,6,0	1/1:2,4:6:0.47:1,0,0	0/1:16,0:16:67.03:67,0,99	0/0:6,0:6:7.24:0,7,201	1/1:6,0:6:5.14:45,5,0	0/0:2,0:2:3:0,3,25	0/1:16,0:17:33.30:226,0,33	0/0:5,0:5:15.05:0,15,423	0/0:4,0:4:12.04:0,12,348	0/0:7,0:7:21.06:0,21,532	1/1:2,0:2:2.73:29,3,0	0/1:7,0:8:20.05:20,0,51	1/1:7,1:8:4.51:15,5,0	./.
chr10	57523261	.	ACCTAGC	A	1714.58	PASS	AB=1.000;AC=29;AF=0.558;AN=52;BaseQRankSum=-0.629;DP=217;FS=4.027;HRun=0;HaplotypeScore=51.0309;InbreedingCoeff=0.5198;MQ=93.92;MQ0=0;MQRankSum=-2.064;QD=12.07;ReadPosRankSum=-3.451;VQSLOD=1.0088;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:23:68.73:69,0,262	./.	0/0:14,0:12:36.08:0,36,711	0/1:20,0:17:0.96:1,0,532	0/1:4,0:4:13.02:13,0,88	0/0:8,0:8:18.06:0,18,608	0/0:11,0:11:30.09:0,30,655	1/1:7,0:7:11.98:132,12,0	0/1:3,0:3:41.39:41,0,53	1/1:1,4:5:11.98:130,12,0	1/1:5,0:5:8.97:71,9,0	0/0:14,0:14:30.06:0,30,701	0/0:5,0:5:9.03:0,9,226	0/0:8,0:8:21.04:0,21,472	1/1:5,0:5:8.96:144,9,0	1/1:6,0:6:6:51,6,0	1/1:16,0:16:14.98:324,15,0	0/1:6,0:6:11.06:11,0,118	1/1:1,5:6:15:161,15,0	1/1:2,0:2:3:25,3,0	1/1:16,0:16:33.04:494,33,0	0/0:5,0:5:15.02:0,15,328	0/0:4,0:4:12.03:0,12,261	0/0:6,0:6:18.04:0,18,383	1/1:2,0:2:6:79,6,0	1/1:2,6:8:2.62:55,3,0	1/1:8,0:8:11.99:101,12,0	./.
chr10	57523270	.	CAG	C	1018.38	PASS	AC=24;AF=0.480;AN=50;BaseQRankSum=3.810;DP=194;FS=16.678;HRun=0;HaplotypeScore=34.3910;InbreedingCoeff=0.7025;MQ=82.30;MQ0=0;MQRankSum=-2.093;QD=15.91;ReadPosRankSum=-0.381;VQSLOD=1.5047;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:56.85:0,57,654	./.	0/0:12,0:10:16.67:0,17,308	0/0:15,0:12:11.74:0,12,250	0/0:5,0:5:8.99:0,9,132	0/0:9,0:12:18.53:0,19,251	0/0:11,0:11:22.79:0,23,290	1/1:2,0:2:3:38,3,0	1/1:6,0:6:2.72:86,3,0	1/1:5,1:6:6.02:78,6,0	1/1:2,0:2:2.75:43,3,0	0/0:14,0:15:24.51:0,25,328	0/0:4,0:4:9.03:0,9,121	0/0:10,0:10:24.08:0,24,337	1/1:4,1:5:6.49:85,6,0	./.	1/1:9,3:12:32.32:424,32,0	0/0:5,0:5:12.03:0,12,145	1/1:7,0:7:3.01:38,3,0	1/1:1,0:1:0.47:1,0,0	1/1:10,1:11:18.52:252,19,0	0/0:4,0:4:8.99:0,9,135	0/0:4,0:4:9.03:0,9,132	0/0:6,0:6:15.01:0,15,198	1/1:3,0:3:6.01:74,6,0	1/1:6,0:6:2.63:35,3,0	1/1:3,0:3:3.01:36,3,0	./.
chr10	57523476	.	CCAAAA	C	1507.06	PASS	AB=0.889;AC=20;AF=0.357;AN=56;BaseQRankSum=0.145;DP=464;FS=34.248;HRun=0;HaplotypeScore=93.2860;InbreedingCoeff=-0.1268;MQ=34.41;MQ0=48;MQRankSum=-4.407;QD=5.64;ReadPosRankSum=-1.871;VQSLOD=-0.0426;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:32:65.95:0,66,719	0/1:4,0:4:7.25:7,0,22	0/1:40,0:3:4.08:4,0,88	0/0:34,0:6:8.38:0,8,70	0/0:27,0:28:1.40:0,1,380	0/0:12,0:11:24.79:0,25,201	0/0:17,0:17:39.39:0,39,652	0/1:24,0:26:80.35:216,0,80	0/1:11,0:11:40.40:49,0,40	0/1:8,3:12:37.79:139,0,38	0/1:6,0:7:18.12:20,0,18	0/0:16,0:15:25.85:0,26,432	0/1:7,0:7:0.50:1,0,126	0/0:7,0:7:17.78:0,18,232	0/1:15,1:17:45.23:175,0,45	1/1:11,0:12:6.06:127,6,0	0/1:25,0:24:57.91:170,0,58	0/0:21,0:19:43.75:0,44,425	0/1:15,0:16:52.48:52,0,65	0/1:14,0:14:68.24:73,0,68	1/1:5,0:5:6.42:42,6,0	0/0:8,0:7:8.10:0,8,109	0/0:12,0:12:20.51:0,21,225	0/0:6,0:6:17.21:0,17,175	1/1:10,1:12:9.70:243,10,0	0/1:10,6:17:34.75:209,0,35	0/1:12,6:19:45.02:113,0,45	0/1:12,0:6:30.14:30,0,76
chr10	57523641	.	TTTTG	T	839.20	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.327;DP=686;FS=3.285;HRun=0;HaplotypeScore=107.6196;InbreedingCoeff=0.9931;MQ=66.10;MQ0=1;MQRankSum=-3.629;QD=31.08;ReadPosRankSum=0.600;VQSLOD=3.7259;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:47:99:0,123,2967	0/0:12,0:12:27.09:0,27,638	0/0:11,0:9:20.99:0,21,376	0/0:30,0:27:54.18:0,54,1103	0/0:17,0:17:51.17:0,51,1240	0/0:19,0:19:48.15:0,48,1142	0/0:37,0:37:87.29:0,87,2045	0/0:39,0:39:99:0,108,2620	0/0:24,0:24:54.18:0,54,1320	0/0:22,0:22:54.18:0,54,1337	0/0:24,0:24:69.13:0,69,1632	0/0:26,0:26:63.22:0,63,1560	0/0:19,0:19:54.16:0,54,1307	0/0:11,0:11:30.10:0,30,758	0/0:27,0:27:72.22:0,72,1580	1/1:4,23:27:54.18:934,54,0	0/0:31,0:31:75.26:0,75,1828	0/0:29,0:29:75.26:0,75,1814	0/0:26,0:26:60.20:0,60,1415	0/0:14,0:14:36.11:0,36,762	0/0:34,0:34:96.30:0,96,2339	0/0:14,0:14:39.13:0,39,901	0/0:23,0:23:60.20:0,60,1395	0/0:43,0:43:99:0,129,3190	0/0:10,0:10:27.07:0,27,626	0/0:29,0:29:69.24:0,69,1671	0/0:25,0:25:69.24:0,69,1644	0/0:15,0:15:38.96:0,39,924
chr10	57531684	.	GA	G	5751.83	PASS	AB=0.757;AC=36;AF=0.643;AN=56;BaseQRankSum=5.382;DP=633;FS=8.065;HRun=12;HaplotypeScore=81.4352;InbreedingCoeff=0.7879;MQ=62.89;MQ0=3;MQRankSum=1.235;QD=14.10;ReadPosRankSum=1.069;VQSLOD=5.0905;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,19:29:30.39:399,30,0	1/1:1,6:8:16.84:122,17,0	0/0:30,0:17:6.01:0,6,152	0/0:24,0:14:3:0,3,35	1/1:7,17:26:51.87:383,52,0	0/1:15,3:18:24.79:25,0,304	0/0:15,2:17:15.67:0,16,320	1/1:15,17:31:25.14:353,25,0	1/1:3,13:16:8.41:248,8,0	1/1:2,17:20:46.80:354,47,0	1/1:5,14:19:43.87:331,44,0	0/0:27,0:32:37.04:0,37,562	0/0:20,0:22:35.04:0,35,358	0/0:25,0:31:27.36:0,27,566	1/1:5,27:33:53.23:596,53,0	1/1:6,11:18:10.47:253,10,0	1/1:5,25:30:38.30:481,38,0	1/1:1,0:23:34.63:100,35,0	1/1:5,15:20:41.78:325,42,0	1/1:6,13:18:35.81:278,36,0	1/1:0,6:6:17.93:139,18,0	0/0:25,0:28:65.08:0,65,661	0/0:16,1:17:15.90:0,16,337	0/0:17,0:18:38.08:0,38,404	1/1:5,16:26:33.53:393,34,0	1/1:5,19:23:53.79:418,54,0	1/1:4,19:23:31.36:417,31,0	0/1:6,7:13:7.97:137,0,8
chr10	57531705	.	CAAAA	C	293.71	PASS	AB=0.745;AC=2;AF=0.036;AN=56;BaseQRankSum=3.959;DP=672;FS=9.589;HRun=9;HaplotypeScore=137.8348;InbreedingCoeff=-0.0328;MQ=62.55;MQ0=6;MQRankSum=-4.247;QD=9.18;ReadPosRankSum=0.208;VQSLOD=0.0677;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:30:84.25:0,84,2064	0/0:7,0:7:18.06:0,18,470	0/0:42,0:21:26.82:0,27,545	0/0:31,0:13:28.31:0,28,350	0/0:27,0:27:75.25:0,75,1847	0/0:20,0:20:60.21:0,60,1525	0/0:21,0:21:57.20:0,57,1386	0/0:37,0:35:99:0,102,2455	0/1:13,1:15:4.97:5,0,1008	0/0:26,0:26:78.27:0,78,1991	0/0:19,0:19:54.19:0,54,1357	0/0:35,0:35:99:0,102,2387	0/0:22,0:22:63.22:0,63,1513	0/0:33,0:34:96.33:0,96,2414	0/0:34,0:33:93.28:0,93,2267	0/1:6,11:17:99:368,0,200	0/0:34,0:34:86.83:0,87,2182	0/0:24,0:24:60.21:0,60,1567	0/0:26,0:25:72.25:0,72,1782	0/0:22,0:21:60.20:0,60,1470	0/0:9,0:9:27.09:0,27,667	0/0:25,0:25:72.23:0,72,1720	0/0:13,0:13:39.13:0,39,950	0/0:17,0:16:51.17:0,51,1246	0/0:20,0:20:60.19:0,60,1462	0/0:20,0:20:60.21:0,60,1455	0/0:26,0:26:69.24:0,69,1782	0/0:12,0:12:36.12:0,36,942
chr10	57537019	.	G	GA	9249.29	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-16.158;DP=697;FS=14.220;HRun=5;HaplotypeScore=65.4391;InbreedingCoeff=0.9906;MQ=82.05;MQ0=0;MQRankSum=-0.777;QD=33.88;ReadPosRankSum=1.880;VQSLOD=4.0127;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,117,1245	0/0:3,0:3:9.02:0,9,97	0/0:20,0:20:41.68:0,42,404	0/0:21,0:21:51.11:0,51,534	0/0:24,0:24:72.18:0,72,772	0/0:17,0:17:48.12:0,48,515	0/0:37,0:37:99:0,102,1087	0/0:28,0:28:78.14:0,78,828	1/1:3,26:29:75.24:987,75,0	1/1:3,22:25:69.21:891,69,0	1/1:0,16:16:45.15:586,45,0	0/0:42,0:42:99:0,120,1258	0/0:28,0:28:78.20:0,78,837	0/0:40,0:40:99:0,120,1274	1/1:2,29:31:84.27:1105,84,0	1/1:4,28:32:81.26:1066,81,0	0/0:35,0:35:99:0,102,1063	0/0:16,0:16:36.08:0,36,386	1/1:2,16:18:48.11:611,48,0	1/1:2,16:18:45.15:592,45,0	1/1:3,33:36:99:1302,99,0	0/0:22,0:22:60.10:0,60,615	0/0:11,0:11:30.05:0,30,314	0/0:36,0:36:99:0,99,1045	1/1:3,17:20:42.14:553,42,0	1/1:3,21:25:66.20:848,66,0	1/1:3,12:15:36.12:472,36,0	1/1:0,8:8:18.06:236,18,0
chr10	57537448	.	T	TG	2897.70	PASS	AB=0.748;AC=20;AF=0.357;AN=56;BaseQRankSum=-2.376;DP=585;FS=39.936;HRun=9;HaplotypeScore=81.6017;InbreedingCoeff=0.6566;MQ=81.81;MQ0=0;MQRankSum=-0.795;QD=14.14;ReadPosRankSum=-0.269;VQSLOD=0.9813;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:31:45.79:0,46,544	0/0:7,0:7:14.99:0,15,130	0/0:18,0:18:38.89:0,39,338	0/0:22,0:22:44.35:0,44,373	0/0:21,0:21:53.02:0,53,448	0/0:30,0:30:65.61:0,66,550	0/0:20,0:20:47.97:0,48,416	0/0:28,0:28:38.93:0,39,338	1/1:4,18:22:13.32:373,13,0	0/1:8,4:12:17.44:117,0,17	1/1:2,10:12:9.02:99,9,0	0/0:30,2:32:38.78:0,39,565	0/0:31,0:31:77.92:0,78,671	1/1:4,28:32:54.15:597,54,0	1/1:6,22:27:36.10:398,36,0	0/0:36,0:36:92.95:0,93,804	0/0:30,1:32:43.81:0,44,598	0/0:18,0:18:50.98:0,51,442	0/1:7,13:20:8.27:336,0,8	0/1:9,1:10:8.08:110,0,8	1/1:10,5:15:1.46:216,1,0	0/0:19,0:19:41.91:0,42,353	0/0:10,0:10:23.59:0,24,192	0/0:24,0:25:55.99:0,56,475	1/1:0,14:14:24.06:265,24,0	1/1:3,7:10:21.04:216,21,0	0/1:10,6:15:18.54:236,0,19	1/1:3,11:14:12.03:133,12,0
chr10	57538087	.	G	GGA	13064.96	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-16.291;DP=758;FS=0.000;HRun=0;HaplotypeScore=94.1124;InbreedingCoeff=0.9953;MQ=82.92;MQ0=1;MQRankSum=-3.461;QD=43.99;ReadPosRankSum=1.282;VQSLOD=5.9323;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,117,1566	0/0:5,0:5:12.04:0,12,165	0/0:22,0:22:50.27:0,50,628	0/0:31,0:30:77.04:0,77,987	0/0:15,0:15:39.11:0,39,505	0/0:24,0:24:63.20:0,63,848	0/0:37,0:37:99:0,108,1466	0/0:33,0:33:87.24:0,87,1160	1/1:2,12:14:27.09:479,27,0	1/1:2,19:21:54.18:937,54,0	1/1:2,14:16:30.10:531,30,0	0/0:54,0:54:99:0,150,2008	0/0:22,0:22:57.15:0,57,762	0/0:40,0:40:99:0,102,1400	1/1:3,21:24:57.20:1010,57,0	1/1:0,28:29:78.17:1384,78,0	0/0:38,0:38:99:0,111,1520	0/0:33,0:33:93.31:0,93,1277	1/1:2,14:16:45.12:728,45,0	1/1:2,19:21:60.21:1047,60,0	1/1:10,63:72:99:3194,181,0	0/0:21,0:21:60.20:0,60,824	0/0:12,0:12:33.09:0,33,436	0/0:33,0:33:93.31:0,93,1277	1/1:0,17:17:48.16:850,48,0	1/1:2,35:38:99:1842,108,0	1/1:3,12:17:33.11:583,33,0	1/1:0,10:11:27.09:479,27,0
chr10	57543792	.	TTCTCTCTCTCTC	T	1344.90	PASS	AB=0.927;AC=24;AF=0.462;AN=52;BaseQRankSum=2.732;DP=556;FS=9.708;HRun=0;HaplotypeScore=187.2905;InbreedingCoeff=0.3195;MQ=56.66;MQ0=14;MQRankSum=0.360;QD=5.36;ReadPosRankSum=2.836;VQSLOD=1.9214;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:19:3.38:0,3,39	1/1:11,0:11:6:92,6,0	./.	./.	0/0:12,1:23:0.94:0,1,2	0/0:18,0:17:6.01:0,6,150	0/0:19,0:17:6.47:0,6,74	1/1:27,0:27:2.81:20,3,0	0/1:9,1:10:25.82:101,0,26	1/1:17,2:21:15.66:407,16,0	1/1:11,0:8:12:129,12,0	0/0:28,0:28:0.89:0,1,2	0/0:23,0:23:24.08:0,24,652	0/0:31,0:31:15.47:0,15,350	1/1:15,1:16:2.84:14,3,0	0/1:21,1:28:0:0,0,0	1/1:4,0:8:6.02:169,6,0	1/1:6,0:9:3.01:84,3,0	0/1:11,0:11:1.85:17,0,2	1/1:15,1:16:6.02:132,6,0	0/0:14,0:12:0.47:0,0,1	0/0:32,0:31:9.02:0,9,226	0/0:19,0:20:3.01:0,3,50	0/0:28,0:27:21.47:0,21,846	1/1:17,1:17:6.02:121,6,0	0/1:20,0:19:19.82:20,0,163	0/1:19,1:22:7.95:164,0,8	0/1:20,0:19:28.65:29,0,109
chr10	57544510	.	G	GCT	510.46	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-5.701;DP=840;FS=0.000;HRun=0;HaplotypeScore=95.8552;InbreedingCoeff=0.9700;MQ=77.88;MQ0=0;MQRankSum=-2.723;QD=31.90;ReadPosRankSum=0.759;VQSLOD=5.2543;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,144,1990	0/0:16,0:16:45.15:0,45,644	0/0:21,0:21:54.18:0,54,769	0/0:16,0:16:39.11:0,39,525	0/0:22,0:22:65.58:0,66,911	0/0:21,0:21:60.20:0,60,860	0/0:28,0:28:81.26:0,81,1142	0/0:29,0:29:81.23:0,81,1080	0/0:31,0:31:93.30:0,93,1314	0/0:24,0:24:66.21:0,66,929	0/0:16,0:16:42.14:0,42,602	0/0:61,0:61:99:0,175,2455	0/0:45,0:45:99:0,126,1805	0/0:47,0:47:99:0,135,1916	0/0:32,0:32:87.08:0,87,1228	0/0:54,0:54:99:0,159,2205	0/0:39,0:39:99:0,105,1465	1/1:4,12:15:33.11:605,33,0	0/0:24,0:24:66.20:0,66,912	0/0:24,0:24:63.20:0,63,884	0/0:48,0:48:99:0,135,1894	0/0:21,0:21:60.17:0,60,823	0/0:19,0:19:51.17:0,51,730	0/0:45,0:45:99:0,132,1854	0/0:29,0:29:87.29:0,87,1243	0/0:33,0:33:93.30:0,93,1316	0/0:25,0:25:66.22:0,66,946	0/0:5,0:5:12.04:0,12,171
chr10	57545820	.	A	ACACACACACACACACACACT	14839.28	PASS	AB=1.000;AC=31;AF=0.554;AN=56;BaseQRankSum=5.018;DP=667;FS=0.000;HRun=0;HaplotypeScore=298.1671;InbreedingCoeff=0.5739;MQ=51.17;MQ0=11;MQRankSum=-11.135;QD=37.66;ReadPosRankSum=-1.947;VQSLOD=2.4061;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:21:5.22:663,0,5	1/1:5,0:5:3.01:102,3,0	0/0:26,0:12:20.16:0,20,283	0/0:38,0:12:16.47:0,16,144	1/1:22,0:22:0.02:271,0,0	0/0:21,0:21:57.08:0,57,1894	0/0:15,0:15:42.02:0,42,1009	0/1:26,0:23:99:769,0,257	1/1:3,0:12:9.03:601,9,0	1/1:23,0:23:65.85:1485,66,0	1/1:14,0:32:24.47:1119,24,0	0/0:24,0:24:72.14:0,72,3159	0/0:44,0:44:99:0,120,5031	0/0:36,0:36:98.85:0,99,3189	1/1:5,14:24:10.44:720,10,0	0/0:37,0:37:99:0,111,4837	0/1:14,0:13:20.36:20,0,122	0/1:13,0:13:99:313,0,144	1/1:21,0:21:56.44:1342,56,0	1/1:14,15:31:15.43:804,15,0	1/1:16,0:16:18.92:217,19,0	0/0:9,0:9:27.09:0,27,1511	0/0:23,0:23:63.11:0,63,2604	0/1:29,0:28:34.32:34,0,2886	1/1:11,0:32:20.72:1651,21,0	1/1:30,0:28:83.03:2439,83,0	1/1:27,0:26:43.46:1496,43,0	1/1:1,8:13:12:792,12,0
chr10	57545841	.	CTTTTTCTTT	C	919.28	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.595;DP=662;FS=16.181;HRun=0;HaplotypeScore=169.5243;InbreedingCoeff=0.8049;MQ=55.51;MQ0=13;MQRankSum=-1.744;QD=19.15;ReadPosRankSum=-3.209;VQSLOD=1.5819;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:14,10:23:11.99:318,12,0	0/0:6,0:6:15.05:0,15,650	0/0:51,0:19:27.09:0,27,760	0/0:54,0:18:10.26:0,10,161	1/1:6,18:24:38.90:717,39,0	0/0:19,0:19:42.14:0,42,1869	0/0:19,0:19:42.14:0,42,1641	0/0:31,0:30:49.41:0,49,1876	0/0:12,0:12:9.03:0,9,255	0/0:20,0:20:25.26:0,25,759	0/0:24,0:24:42.14:0,42,1777	0/0:26,0:26:54.19:0,54,2142	0/0:40,0:40:81.28:0,81,3354	0/0:34,0:34:69.21:0,69,2768	0/0:23,0:23:15:0,15,633	0/0:38,0:38:78.26:0,78,3280	0/0:11,0:11:27.09:0,27,1139	0/0:12,0:12:30.10:0,30,1186	0/0:24,0:22:36.12:0,36,1230	0/0:27,0:27:40.38:0,40,1521	0/0:6,0:6:12.04:0,12,501	0/0:8,0:8:12.04:0,12,459	0/0:17,0:17:33.11:0,33,1296	0/0:24,0:24:42.62:0,43,1791	0/0:20,0:20:6.02:0,6,233	0/0:22,0:22:48.12:0,48,1936	0/0:31,0:31:66.18:0,66,2158	0/0:13,0:13:6.02:0,6,271
chr10	57552685	.	C	CA	6494.97	PASS	AB=0.765;AC=34;AF=0.607;AN=56;BaseQRankSum=18.479;DP=733;FS=0.995;HRun=2;HaplotypeScore=234.5843;InbreedingCoeff=0.8865;MQ=78.70;MQ0=1;MQRankSum=-17.706;QD=15.28;ReadPosRankSum=2.681;VQSLOD=4.7461;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:14,18:32:52.03:513,52,0	1/1:5,11:16:38.96:339,39,0	0/0:26,0:26:69.18:0,69,804	0/0:31,0:30:81.22:0,81,945	1/1:7,14:21:29.56:358,30,0	0/0:27,0:27:63.18:0,63,767	0/0:23,0:23:60.19:0,60,743	1/1:33,7:40:24.87:265,25,0	1/1:9,15:24:42.90:410,43,0	1/1:10,14:24:45.06:430,45,0	1/1:14,13:27:27.54:435,28,0	0/0:46,0:46:99:0,129,1583	0/0:35,0:35:96.29:0,96,1176	0/0:44,0:44:99:0,129,1573	1/1:17,27:44:89.95:810,90,0	1/1:13,34:47:74.14:894,74,0	1/1:6,9:15:29.99:269,30,0	1/1:5,14:19:33.01:320,33,0	1/1:9,10:19:25.67:303,26,0	1/1:7,15:22:44.77:399,45,0	0/1:9,4:13:1.84:47,0,2	0/0:24,0:24:72.21:0,72,877	0/0:15,0:15:42.13:0,42,521	0/0:37,0:37:99:0,102,1250	0/1:9,3:13:2.96:62,0,3	1/1:17,8:25:16.25:230,16,0	1/1:6,15:18:39.03:356,39,0	1/1:1,2:3:6.01:56,6,0
chr10	57552688	.	T	TACAAGATACGAA	55722.88	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=12.708;DP=716;FS=6.738;HRun=0;HaplotypeScore=254.1096;InbreedingCoeff=0.9964;MQ=79.12;MQ0=1;MQRankSum=-20.436;QD=135.58;ReadPosRankSum=-0.585;VQSLOD=4.1244;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,17:30:79.29:3996,79,0	1/1:5,9:16:48.12:2487,48,0	0/0:27,0:27:78.27:0,78,2517	0/0:30,0:29:84.24:0,84,2860	1/1:13,13:26:72.12:3273,72,0	0/0:26,0:26:78.10:0,78,2538	0/0:23,0:23:69.21:0,69,2265	1/1:27,7:33:95.22:4619,95,0	1/1:10,14:25:75.25:3752,75,0	1/1:13,14:24:69.02:3569,69,0	1/1:13,13:26:58.61:2789,59,0	0/0:47,0:47:99:0,132,4907	0/0:33,0:33:99:0,99,3503	0/0:44,0:44:99:0,132,4594	1/1:16,27:42:99:6268,116,0	1/1:11,34:45:99:7134,132,0	1/1:9,9:18:48.09:2367,48,0	1/1:5,9:14:36.12:1813,36,0	1/1:6,8:14:36.12:2031,36,0	1/1:9,13:22:63.17:3182,63,0	1/1:8,3:11:21.03:879,21,0	0/0:25,0:25:69.22:0,69,2509	0/0:16,0:16:42.14:0,42,1664	0/0:34,0:34:99:0,99,3909	1/1:6,2:8:21.07:894,21,0	1/1:9,8:18:54.14:2742,54,0	1/1:11,15:23:68.42:3426,68,0	1/1:5,2:7:15:502,15,0
chr10	57553645	.	C	CT	905.47	PASS	AB=0.938;AC=13;AF=0.232;AN=56;BaseQRankSum=-3.200;DP=502;FS=3.843;HRun=14;HaplotypeScore=69.7146;InbreedingCoeff=0.2379;MQ=72.50;MQ0=1;MQRankSum=-2.218;QD=4.57;ReadPosRankSum=-0.529;VQSLOD=1.6982;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,24:39:31.75:383,32,0	0/1:9,0:9:1.01:1,0,61	0/0:17,0:14:3.42:0,3,75	0/0:13,0:11:4.21:0,4,32	1/1:9,14:23:33.69:253,34,0	0/0:13,2:16:4.27:0,4,137	0/1:10,0:12:3.50:4,0,33	0/1:28,1:33:13.15:13,0,216	0/0:15,0:15:20.43:0,20,132	0/0:18,0:18:20.01:0,20,133	0/0:20,0:20:32.24:0,32,205	0/0:20,0:20:25.42:0,25,170	0/0:7,0:8:4.79:0,5,25	0/0:17,0:17:25.58:0,26,169	0/0:14,1:16:5.09:0,5,152	0/0:18,1:21:1.08:0,1,120	0/0:19,0:21:21.56:0,22,127	1/1:2,21:26:27.41:372,27,0	0/0:17,1:19:4.17:0,4,136	0/1:12,1:13:6.46:6,0,94	0/0:4,0:4:8.86:0,9,58	0/1:9,1:10:14.55:15,0,45	0/0:18,1:19:3.04:0,3,146	0/0:10,0:12:12.76:0,13,69	0/1:13,2:16:0.74:1,0,115	0/0:16,0:20:22.81:0,23,120	0/0:25,0:25:31.28:0,31,196	0/1:11,1:17:8.60:9,0,55
chr10	57556107	.	AGTGTGT	A	2241.96	PASS	AB=1.000;AC=18;AF=0.321;AN=56;BaseQRankSum=3.863;DP=826;FS=12.122;HRun=0;HaplotypeScore=176.5796;InbreedingCoeff=0.4402;MQ=66.70;MQ0=12;MQRankSum=-0.559;QD=7.12;ReadPosRankSum=-0.017;VQSLOD=2.0921;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:38,0:38:74.98:310,0,75	1/1:8,1:9:5.81:92,6,0	0/0:49,0:19:10.70:0,11,139	0/0:60,0:31:29.41:0,29,318	1/1:25,0:25:8.89:118,9,0	0/0:20,0:20:30.10:0,30,768	0/0:39,0:39:89.92:0,90,2233	1/1:16,19:34:42.30:786,42,0	0/0:28,0:29:17.75:0,18,289	0/1:20,0:19:99:152,0,308	1/1:17,0:17:17.75:236,18,0	0/0:38,0:39:81.71:0,82,2017	0/0:21,0:22:51.01:0,51,1172	0/0:32,0:33:57.14:0,57,1305	0/0:32,0:32:14.98:0,15,240	0/0:28,0:28:30.95:0,31,664	1/1:43,0:43:20.61:441,21,0	1/1:18,0:18:6.49:80,6,0	0/1:11,0:11:33.87:34,0,46	0/0:16,0:16:8.96:0,9,136	0/1:68,0:66:2.10:2,0,341	0/0:33,0:33:74.56:0,75,1590	0/0:19,0:19:24.55:0,25,604	0/0:43,0:48:90.76:0,91,2559	0/0:24,0:23:2.04:0,2,6	0/1:22,0:22:99:124,0,554	0/0:20,0:20:8.52:0,9,90	0/1:9,0:9:48.92:49,0,207
chr10	57556119	.	TGTGTGTGTGTGTGA	T	1972.87	PASS	AB=0.939;AC=11;AF=0.196;AN=56;BaseQRankSum=4.610;DP=839;FS=0.000;HRun=0;HaplotypeScore=254.0518;InbreedingCoeff=0.1969;MQ=54.65;MQ0=16;MQRankSum=-0.114;QD=7.74;ReadPosRankSum=-0.829;VQSLOD=2.0505;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:12,28:40:27.09:1086,27,0	0/0:9,0:9:11.55:0,12,300	0/0:50,0:12:17.74:0,18,286	0/1:65,0:22:1.32:1,0,460	1/1:3,20:23:9.03:363,9,0	0/0:17,0:17:32.75:0,33,1473	0/0:38,0:38:76.36:0,76,4507	0/1:33,0:32:99:221,0,764	0/0:31,0:31:22.42:0,22,1010	0/1:17,0:16:49.15:49,0,1079	0/1:16,0:16:99:103,0,130	0/0:41,0:41:94.16:0,94,4674	0/0:23,0:23:35.59:0,36,2496	0/0:36,0:36:66.12:0,66,3306	0/0:33,0:33:18.46:0,18,711	0/0:25,0:25:23.82:0,24,1263	0/0:46,0:45:33.99:0,34,1230	0/1:5,14:19:82.14:252,0,82	0/0:9,0:9:17.79:0,18,365	0/1:15,0:15:18.91:19,0,308	0/0:75,0:71:34.47:0,34,1276	0/0:30,0:30:66.75:0,67,2765	0/0:19,0:19:30.99:0,31,1498	0/0:52,0:52:99:0,112,6074	0/1:27,0:26:30.61:31,0,76	0/0:21,0:21:32.69:0,33,1793	0/0:21,0:21:8.79:0,9,314	0/0:8,0:8:12.04:0,12,628
chr10	57556121	.	T	TGTGTGA	2824.89	PASS	AB=0.854;AC=23;AF=0.411;AN=56;BaseQRankSum=5.401;DP=837;FS=1.377;HRun=0;HaplotypeScore=179.1626;InbreedingCoeff=0.5491;MQ=54.56;MQ0=16;MQRankSum=-3.125;QD=7.68;ReadPosRankSum=-1.590;VQSLOD=1.9186;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:11.35:0,11,280	0/1:8,0:8:8.06:8,0,69	0/0:49,0:11:10.19:0,10,205	0/0:64,0:21:35.86:0,36,418	0/0:23,0:23:3.13:0,3,8	0/0:15,0:15:30.03:0,30,598	0/0:37,0:37:99:0,102,1778	0/1:34,0:33:58.65:541,0,59	1/1:9,21:32:9.78:504,10,0	1/1:15,0:14:34.56:256,35,0	1/1:15,0:15:20.36:185,20,0	0/0:39,0:39:99:0,100,1680	0/0:23,0:23:56.91:0,57,888	0/0:33,0:33:68.44:0,68,1199	1/1:10,21:35:13.07:281,13,0	0/0:25,0:25:32.86:0,33,480	0/1:47,0:46:26.75:27,0,219	0/0:19,0:19:11.80:0,12,116	0/1:5,4:10:15.20:137,0,15	1/1:13,1:15:8.82:94,9,0	0/1:27,45:75:47.39:214,0,47	0/0:30,0:30:77.36:0,77,1346	0/0:20,0:20:29.55:0,30,555	0/0:54,0:54:99:0,117,2124	1/1:26,0:25:8.94:69,9,0	1/1:22,0:22:7.47:384,7,0	1/1:6,12:22:5.85:151,6,0	1/1:8,0:8:20.56:173,21,0
chr10	57556123	.	T	TGTGA	2060.06	PASS	AB=0.952;AC=18;AF=0.321;AN=56;BaseQRankSum=5.340;DP=808;FS=0.000;HRun=0;HaplotypeScore=153.7717;InbreedingCoeff=0.2813;MQ=53.50;MQ0=17;MQRankSum=-1.390;QD=6.36;ReadPosRankSum=0.899;VQSLOD=2.2259;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:32.46:0,32,279	0/1:8,0:8:7.98:8,0,43	0/0:49,0:10:16.37:0,16,217	0/0:62,0:21:35.94:0,36,379	0/0:22,0:22:8.48:0,8,43	0/0:13,0:14:29.98:0,30,533	0/0:36,0:36:99:0,102,1578	0/1:31,0:30:83.43:488,0,83	1/1:31,0:31:9.78:322,10,0	1/1:13,0:12:15.54:194,16,0	0/1:15,0:15:2.49:132,0,2	0/0:41,0:41:99:0,105,1526	0/0:23,0:23:59.12:0,59,797	0/0:31,0:31:71.78:0,72,1071	1/1:31,1:32:14.09:233,14,0	0/0:25,0:25:32.99:0,33,421	0/1:45,0:44:53.85:54,0,90	0/0:18,0:18:8.93:0,9,75	0/1:12,0:11:55.86:56,0,83	0/1:7,7:16:16.04:72,0,16	0/1:73,0:71:94.89:252,0,95	0/0:29,0:29:77.71:0,78,1216	0/0:17,0:17:29.62:0,30,496	0/0:53,0:53:99:0,120,1835	0/0:11,13:25:3.01:0,3,33	0/1:21,0:21:99:183,0,121	1/1:18,0:18:5.85:106,6,0	1/1:7,0:7:2.38:136,2,0
chr10	57556129	.	TGTGA	T	2699.55	PASS	AB=0.960;AC=23;AF=0.411;AN=56;BaseQRankSum=5.955;DP=803;FS=6.096;HRun=0;HaplotypeScore=143.4857;InbreedingCoeff=0.1134;MQ=53.10;MQ0=18;MQRankSum=-2.376;QD=5.35;ReadPosRankSum=-5.678;VQSLOD=0.0670;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:31,0:31:6.08:261,6,0	0/1:2,6:8:8.34:75,0,8	0/1:47,0:10:17.60:18,0,38	0/1:66,0:24:11.78:61,0,12	1/1:20,0:20:9.02:96,9,0	0/0:16,0:16:5.81:0,6,491	0/0:41,0:41:92.95:0,93,1634	1/1:33,0:32:40.47:499,40,0	0/1:30,0:30:24.59:25,0,156	0/1:15,0:14:99:133,0,160	1/1:15,0:15:20.97:173,21,0	0/0:40,0:40:99:0,104,1634	0/0:21,0:21:19.38:0,19,825	0/0:30,0:30:46.84:0,47,949	0/1:31,0:31:45.46:45,0,108	0/0:28,0:28:0.76:0,1,263	1/1:9,31:39:33.60:749,34,0	0/1:16,0:16:8.86:73,0,9	0/1:15,0:14:41.17:157,0,41	0/1:18,0:18:41.08:41,0,53	0/1:70,0:66:90.66:152,0,91	0/0:28,0:28:55.55:0,56,1022	0/0:15,0:15:29.42:0,29,419	0/0:55,0:55:99:0,122,2265	1/1:24,0:23:5.04:66,5,0	0/1:25,0:25:99:257,0,188	0/0:17,0:17:7.87:0,8,61	0/0:7,0:7:12.03:0,12,143
chr10	57556133	.	A	AGT	1755.13	PASS	AB=0.985;AC=31;AF=0.574;AN=54;BaseQRankSum=7.063;DP=804;FS=1.062;HRun=0;HaplotypeScore=139.9175;InbreedingCoeff=0.4946;MQ=52.45;MQ0=18;MQRankSum=-5.877;QD=3.59;ReadPosRankSum=0.163;VQSLOD=2.9256;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:31,0:31:13.16:90,0,13	0/1:8,0:8:2.83:3,0,58	0/0:43,0:10:11.49:0,11,83	0/1:63,0:21:7.85:8,0,95	1/1:20,0:20:8.54:44,9,0	0/1:16,0:17:33.86:34,0,154	0/0:43,0:44:74.66:0,75,787	1/1:37,0:36:24.07:335,24,0	1/1:29,0:29:21.44:178,21,0	1/1:14,0:13:0.47:1,0,0	./.	0/0:44,0:44:68.51:0,69,775	0/0:19,0:19:36.06:0,36,403	0/0:29,0:31:53.31:0,53,572	1/1:33,0:33:16.20:144,16,0	1/1:6,19:26:0.92:165,1,0	0/1:35,3:37:11.97:330,0,12	1/1:16,0:16:6.84:35,7,0	1/1:15,0:14:8.03:38,8,0	1/1:18,0:18:7.51:61,8,0	1/1:74,0:70:27.82:259,28,0	0/0:26,0:26:41.48:0,41,455	0/0:15,0:15:17.45:0,17,177	0/0:55,0:55:99:0,105,1193	0/0:23,0:22:0.47:0,0,1	1/1:29,0:29:19.06:134,19,0	1/1:17,0:17:5.99:48,6,0	1/1:4,0:4:3.01:33,3,0
chr10	57556737	.	C	CAAA	4109.75	PASS	AB=0.980;AC=36;AF=0.643;AN=56;BaseQRankSum=0.562;DP=562;FS=9.474;HRun=15;HaplotypeScore=98.8624;InbreedingCoeff=0.7762;MQ=55.01;MQ0=6;MQRankSum=-5.181;QD=10.27;ReadPosRankSum=-3.710;VQSLOD=-0.6627;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:15,8:29:23.81:263,24,0	1/1:3,0:10:16.21:144,16,0	0/1:14,0:7:25.11:39,0,25	0/0:7,0:5:5.24:0,5,41	1/1:16,5:24:33.95:356,34,0	0/0:18,0:21:18.94:0,19,191	0/0:13,0:14:25.08:0,25,219	1/1:13,0:22:31.91:247,32,0	1/1:11,1:15:19.18:200,19,0	1/1:16,8:28:35.96:435,36,0	1/1:14,1:23:19.94:166,20,0	0/0:23,0:26:49.89:0,50,433	0/0:19,0:20:20.30:0,20,229	0/0:17,0:18:13.59:0,14,168	1/1:12,2:23:14.03:147,14,0	0/0:22,0:24:37.73:0,38,336	1/1:12,1:26:25.25:209,25,0	1/1:9,0:11:4.23:26,4,0	1/1:25,2:26:28.71:401,29,0	1/1:13,2:19:39:456,39,0	1/1:10,3:12:9.41:92,9,0	0/1:18,0:23:1.78:2,0,120	0/0:10,0:11:13.63:0,14,110	0/0:18,0:19:20.97:0,21,234	1/1:10,4:16:7.21:74,7,0	1/1:14,10:24:3.64:425,4,0	1/1:17,13:30:22.89:269,23,0	1/1:6,3:9:12.02:161,12,0
chr10	57557524	.	AACACACACAC	A	3035.37	PASS	AB=0.894;AC=14;AF=0.269;AN=52;BaseQRankSum=5.387;DP=903;FS=1.980;HRun=0;HaplotypeScore=263.2471;InbreedingCoeff=-0.1770;MQ=55.97;MQ0=10;MQRankSum=-6.004;QD=6.16;ReadPosRankSum=1.698;VQSLOD=2.1978;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:42:33.11:0,33,1185	0/0:16,0:17:12.04:0,12,303	./.	./.	0/0:13,0:13:21.07:0,21,780	0/0:13,0:13:24.08:0,24,923	0/0:24,0:28:41.81:0,42,1037	0/0:47,0:46:36.51:0,37,823	0/1:31,4:35:99:146,0,174	0/1:55,1:55:99:176,0,1396	0/1:18,9:27:99:323,0,265	0/0:28,0:31:30.10:0,30,1177	0/0:20,0:19:27.09:0,27,992	0/0:23,0:23:23.08:0,23,872	0/1:49,14:64:99:575,0,925	1/1:10,0:34:36.04:829,36,0	0/0:33,0:41:34.67:0,35,964	0/1:22,0:23:99:122,0,150	0/1:39,2:38:99:191,0,356	0/1:30,0:30:28.13:67,0,28	0/1:59,0:55:31.47:31,0,346	0/0:8,0:11:21.07:0,21,788	0/0:14,0:14:20.94:0,21,770	0/0:49,0:49:81.28:0,81,3122	0/1:20,6:26:99:302,0,154	0/1:45,2:46:99:165,0,1209	0/1:19,5:24:99:201,0,701	0/1:20,6:25:65.17:65,0,600
chr10	57558024	.	CG	C	3185.88	PASS	AB=0.767;AC=34;AF=0.630;AN=54;BaseQRankSum=2.552;DP=253;FS=7.952;HRun=3;HaplotypeScore=40.4616;InbreedingCoeff=0.7487;MQ=42.26;MQ0=35;MQRankSum=-2.446;QD=20.29;ReadPosRankSum=0.132;VQSLOD=2.2913;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:4:5.99:49,6,0	1/1:2,8:8:15:166,15,0	./.	0/0:20,1:2:5.27:0,5,22	1/1:6,7:13:20.80:206,21,0	0/0:12,0:12:33.04:0,33,411	0/0:6,0:6:8.96:0,9,97	1/1:2,11:13:36.06:418,36,0	1/1:2,1:3:9.01:89,9,0	1/1:6,3:8:14.97:140,15,0	1/1:1,6:7:15.05:179,15,0	0/0:5,0:5:15.03:0,15,195	0/0:4,0:4:6.01:0,6,66	0/0:5,0:5:11.96:0,12,129	1/1:2,3:5:11.99:121,12,0	0/0:10,0:9:18.03:0,18,221	1/1:6,11:18:41.43:444,41,0	0/1:7,3:9:10.29:108,0,10	1/1:2,3:5:11.77:121,12,0	1/1:5,2:7:18.75:164,19,0	1/1:1,2:2:3.01:37,3,0	0/0:4,0:4:12.01:0,12,135	0/0:7,0:7:17.94:0,18,191	0/1:3,0:3:2.48:2,0,37	1/1:5,10:15:33.08:379,33,0	1/1:3,5:8:23.96:253,24,0	1/1:4,10:14:33.07:370,33,0	1/1:5,3:7:14.87:138,15,0
chr10	57558038	.	CCCAA	C	159.02	PASS	AB=0.979;AC=15;AF=0.268;AN=56;BaseQRankSum=1.452;DP=298;FS=33.781;HRun=0;HaplotypeScore=78.5539;InbreedingCoeff=-0.2115;MQ=49.05;MQ0=37;MQRankSum=-3.066;QD=0.95;ReadPosRankSum=1.406;VQSLOD=-0.3602;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:5:11.88:0,12,108	1/1:6,0:4:1.51:5,2,0	0/1:36,0:5:1.45:1,0,93	0/0:34,0:7:13.58:0,14,183	0/0:13,0:13:13.59:0,14,323	0/0:16,0:16:43.68:0,44,662	0/0:3,0:3:9.03:0,9,118	0/0:14,0:14:33.23:0,33,185	0/1:4,0:3:14.03:30,0,14	0/1:6,0:5:12.36:12,0,39	0/1:9,0:9:0.32:0,0,94	0/0:5,0:5:14.63:0,15,165	0/0:2,0:2:5.87:0,6,35	0/0:10,0:10:24.13:0,24,339	0/0:6,0:6:14.33:0,14,65	0/1:9,0:8:1.34:1,0,79	0/1:18,0:16:9.55:10,0,98	0/1:15,0:13:3.34:3,0,157	0/1:12,0:12:37.34:37,0,147	0/1:7,0:7:17.08:41,0,17	0/0:3,0:3:2.90:0,3,16	0/0:1,0:1:3.01:0,3,35	0/0:5,0:5:13.27:0,13,140	0/1:6,0:5:4.98:5,0,57	0/1:16,4:20:62.57:63,0,164	0/1:10,0:10:49.21:49,0,120	0/0:14,0:13:29.47:0,29,235	0/1:8,0:9:34.10:34,0,34
chr10	57558039	.	CCAAA	C	686.81	PASS	AB=0.902;AC=19;AF=0.339;AN=56;BaseQRankSum=2.160;DP=299;FS=0.000;HRun=0;HaplotypeScore=76.5706;InbreedingCoeff=0.1830;MQ=48.94;MQ0=37;MQRankSum=-4.513;QD=5.54;ReadPosRankSum=3.048;VQSLOD=1.3116;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:5:11.25:0,11,131	1/1:6,0:4:5.83:42,6,0	0/0:39,0:7:10.97:0,11,127	0/0:34,0:7:8.22:0,8,149	0/0:12,0:13:22.63:0,23,254	0/0:16,0:16:44.11:0,44,633	0/0:4,0:4:11.97:0,12,138	0/1:14,0:14:19.94:20,0,71	1/1:3,1:3:4.07:49,4,0	1/1:4,0:5:6.55:36,7,0	0/1:9,0:9:13.30:40,0,13	0/0:5,0:5:14.95:0,15,150	0/0:1,0:1:3.01:0,3,34	0/0:10,0:10:25.59:0,26,332	1/1:6,0:6:3.12:22,3,0	0/0:6,0:7:2.75:0,3,59	0/1:15,0:16:7.23:123,0,7	0/0:12,0:13:3.97:0,4,126	0/1:12,0:12:33.88:87,0,34	1/1:2,2:7:7.70:102,8,0	1/1:3,0:3:1.25:3,1,0	0/0:1,0:1:2.94:0,3,18	0/0:5,0:5:14.94:0,15,151	0/0:5,0:5:0.26:0,0,37	0/1:17,1:20:28.90:123,0,29	0/1:7,3:10:30.56:120,0,31	0/0:13,0:12:1.41:0,1,38	0/1:7,1:9:3.42:78,0,3
chr10	57558596	.	TATA	T	12133.07	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=18.562;DP=753;FS=27.086;HRun=0;HaplotypeScore=106.9346;InbreedingCoeff=1.0000;MQ=83.35;MQ0=0;MQRankSum=-4.960;QD=41.27;ReadPosRankSum=2.200;VQSLOD=3.7840;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,102,2246	0/0:18,0:18:54.19:0,54,1222	0/0:31,0:31:72.24:0,72,1504	0/0:14,0:14:42.14:0,42,926	0/0:25,0:25:72.19:0,72,1491	0/0:22,0:22:63.19:0,63,1364	0/0:22,0:22:66.18:0,66,1304	0/0:36,0:36:99:0,99,2178	1/1:2,21:23:54.18:883,54,0	1/1:3,35:38:99:1631,102,0	1/1:1,23:24:57.19:919,57,0	0/0:38,0:38:99:0,114,2472	0/0:24,0:24:72.25:0,72,1586	0/0:41,0:41:99:0,120,2664	1/1:0,44:44:99:2047,123,0	0/0:45,0:44:99:0,132,2952	0/0:28,0:28:78.27:0,78,1745	0/0:16,0:16:42.14:0,42,911	1/1:3,17:20:51.16:809,51,0	1/1:2,16:18:45.15:706,45,0	1/1:2,31:33:75.25:1218,75,0	0/0:23,0:23:66.23:0,66,1476	0/0:16,0:16:45.15:0,45,1020	0/0:25,0:25:75.26:0,75,1679	1/1:2,20:22:39.13:636,39,0	1/1:0,27:27:81.25:1302,81,0	1/1:1,31:32:81:1332,81,0	1/1:0,13:13:39.13:650,39,0
chr10	57559949	.	G	GT	1479.18	PASS	AB=0.929;AC=5;AF=0.089;AN=56;BaseQRankSum=-5.890;DP=700;FS=10.491;HRun=9;HaplotypeScore=72.4409;InbreedingCoeff=0.8719;MQ=69.74;MQ0=5;MQRankSum=-0.933;QD=19.46;ReadPosRankSum=1.382;VQSLOD=3.6295;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,33:38:72.32:928,72,0	0/1:12,1:13:0.20:0,0,227	0/0:32,0:27:29.73:0,30,331	0/0:27,0:14:25.43:0,25,212	1/1:2,23:25:43.02:672,43,0	0/0:27,0:27:77.97:0,78,673	0/0:22,0:22:62.95:0,63,540	0/0:35,0:34:65.53:0,66,568	0/0:11,0:11:26.99:0,27,234	0/0:34,0:34:89.96:0,90,779	0/0:29,0:29:80.98:0,81,701	0/0:23,0:23:59.95:0,60,512	0/0:22,0:22:62.98:0,63,547	0/0:25,0:25:65.97:0,66,573	0/0:30,0:30:74.97:0,75,648	0/0:28,0:28:83.97:0,84,725	0/0:39,0:39:95.95:0,96,833	0/0:25,0:25:68.90:0,69,586	0/0:22,0:21:50.97:0,51,443	0/0:20,0:19:50.98:0,51,442	0/0:17,0:17:32.97:0,33,283	0/0:21,0:21:56.96:0,57,488	0/0:18,0:18:50.98:0,51,442	0/0:27,0:27:77.94:0,78,670	0/0:26,0:27:71.02:0,71,605	0/0:25,0:25:59.96:0,60,521	0/0:31,0:30:83.97:0,84,729	0/0:7,0:7:18:0,18,156
chr10	57560354	.	ATC	A	2188.96	PASS	AB=0.967;AC=28;AF=0.500;AN=56;BaseQRankSum=2.162;DP=501;FS=14.319;HRun=0;HaplotypeScore=95.7916;InbreedingCoeff=0.7784;MQ=63.89;MQ0=9;MQRankSum=-1.417;QD=9.12;ReadPosRankSum=-2.819;VQSLOD=1.8330;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:41,0:39:2.99:24,3,0	1/1:5,0:5:2.75:25,3,0	0/0:25,0:10:10.14:0,10,119	0/0:24,0:13:21.51:0,22,142	0/1:14,0:14:0:0,0,0	0/0:21,0:21:20.75:0,21,197	0/0:29,0:29:44.22:0,44,339	1/1:26,0:26:47.76:542,48,0	1/1:15,0:15:5.98:48,6,0	1/1:17,0:17:47.80:385,48,0	0/0:13,0:13:0.47:0,0,1	0/0:20,0:20:40.59:0,41,290	0/0:18,0:18:31.89:0,32,504	0/0:17,0:17:27.20:0,27,397	0/0:17,0:17:0:0,0,0	0/0:20,0:20:22.91:0,23,365	1/1:11,1:12:5.99:49,6,0	1/1:15,2:17:38.80:297,39,0	1/1:9,0:9:20.90:166,21,0	1/1:12,0:11:27.40:216,27,0	1/1:31,0:30:41.73:312,42,0	0/0:11,0:11:29.52:0,30,221	0/0:10,0:10:17.96:0,18,145	0/0:34,0:33:50.14:0,50,319	0/1:13,1:14:0:0,0,0	1/1:16,0:16:32.90:261,33,0	1/1:9,0:9:2.83:25,3,0	1/1:2,0:2:5.82:33,6,0
chr10	57560356	.	CTCTGTGTG	C	2924.21	PASS	AB=0.756;AC=26;AF=0.481;AN=54;BaseQRankSum=1.810;DP=507;FS=8.207;HRun=0;HaplotypeScore=123.0457;InbreedingCoeff=0.6032;MQ=61.33;MQ0=10;MQRankSum=-0.387;QD=10.59;ReadPosRankSum=-1.582;VQSLOD=1.8065;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:3,0:34:3.01:65,3,0	0/0:0,0:5:0.89:0,1,3	0/0:23,0:8:10.14:0,10,119	0/0:25,0:13:21.55:0,22,175	./.	0/0:23,0:22:29.04:0,29,329	0/0:30,0:30:45.76:0,46,394	1/1:13,0:25:19.84:483,20,0	1/1:1,13:15:6.02:150,6,0	1/1:0,18:18:48:596,48,0	0/1:1,11:13:0:0,0,0	0/0:20,0:20:40.24:0,40,375	0/0:19,0:19:42.45:0,42,1016	0/0:19,0:19:45.01:0,45,697	0/0:1,1:18:0:0,0,0	0/1:22,1:23:36.90:37,0,612	0/1:2,0:12:4:4,0,20	1/1:16,0:17:38.87:447,39,0	1/1:10,0:9:20.46:165,20,0	1/1:13,0:12:27.40:216,27,0	1/1:30,2:31:41.73:312,42,0	0/0:11,0:11:29.88:0,30,299	0/0:11,0:11:17.97:0,18,169	0/1:34,0:33:48.61:49,0,525	0/0:2,1:14:0:0,0,0	1/1:2,13:16:32.96:465,33,0	1/1:3,7:10:1.78:84,2,0	1/1:2,0:2:5.82:33,6,0
chr10	57560358	.	CTGTG	C	1116.60	PASS	AB=0.990;AC=26;AF=0.650;AN=40;BaseQRankSum=2.048;DP=501;FS=1.025;HRun=0;HaplotypeScore=105.2752;InbreedingCoeff=0.2898;MQ=59.06;MQ0=12;MQRankSum=-1.741;QD=3.95;ReadPosRankSum=-0.683;VQSLOD=2.1664;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:36,0:34:3:25,3,0	1/1:5,0:5:3.01:41,3,0	./.	./.	./.	0/0:16,8:24:2.74:0,3,12	1/1:16,15:31:5.65:89,6,0	1/1:25,0:25:0.47:1,0,0	1/1:15,0:15:6:53,6,0	0/1:18,0:18:8.77:59,0,9	0/1:13,0:13:0:0,0,0	1/1:19,0:19:12.03:167,12,0	0/0:15,0:19:27.28:0,27,457	0/0:18,0:19:14.68:0,15,199	0/0:18,0:18:0:0,0,0	0/1:22,1:23:52.63:53,0,180	0/1:12,0:12:15.24:54,0,15	1/1:17,0:17:8.95:89,9,0	./.	./.	./.	1/1:12,0:11:5.70:55,6,0	./.	1/1:31,2:33:23.57:445,24,0	0/0:13,0:13:0:0,0,0	1/1:15,0:15:9:80,9,0	1/1:8,0:8:2.80:27,3,0	./.
chr10	57560401	.	T	TGC	489.33	PASS	AB=0.945;AC=21;AF=0.375;AN=56;BaseQRankSum=2.310;DP=491;FS=4.331;HRun=0;HaplotypeScore=111.4734;InbreedingCoeff=0.4852;MQ=39.22;MQ0=39;MQRankSum=-6.785;QD=2.45;ReadPosRankSum=-0.904;VQSLOD=2.2168;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:31,0:31:0.52:15,0,1	1/1:7,0:7:5.10:35,5,0	0/0:31,0:4:12.01:0,12,108	0/0:24,0:2:5.95:0,6,42	0/1:14,0:14:0.09:0,0,0	0/0:20,0:20:11.89:0,12,99	0/0:39,0:36:45.84:0,46,359	1/1:19,0:17:42.07:198,42,0	0/0:11,0:11:1.11:0,1,12	1/1:16,0:14:1.17:22,1,0	0/0:9,0:9:1.25:0,1,3	0/0:31,0:33:68.04:0,68,571	0/0:25,0:25:44.46:0,44,477	0/0:17,0:17:38.19:0,38,362	0/1:11,0:11:0:0,0,0	0/1:7,11:19:3.49:52,0,3	1/1:11,0:9:7.64:50,8,0	0/1:18,0:18:1.45:112,0,1	1/1:11,0:10:14.64:100,15,0	0/0:4,0:4:0:0,0,0	0/0:24,0:23:0.86:0,1,2	0/0:9,0:8:11.96:0,12,93	0/0:9,0:9:11.96:0,12,95	0/0:33,0:32:59.96:0,60,604	0/1:13,0:14:0:0,0,0	0/1:11,0:11:4.50:25,0,5	1/1:14,0:13:0.17:18,0,0	1/1:3,0:1:2.88:15,3,0
chr10	57560406	.	CTGTCT	C	607.15	PASS	AB=0.796;AC=14;AF=0.269;AN=52;BaseQRankSum=6.056;DP=462;FS=9.727;HRun=0;HaplotypeScore=115.6127;InbreedingCoeff=0.1658;MQ=38.76;MQ0=36;MQRankSum=-3.283;QD=3.94;ReadPosRankSum=2.073;VQSLOD=1.7784;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:20,6:26:17.95:187,18,0	0/0:7,0:7:9.90:0,10,184	0/0:31,0:4:12.04:0,12,182	0/0:27,0:3:9.03:0,9,185	0/1:4,9:13:0.09:0,0,0	0/0:19,0:19:12.04:0,12,326	0/0:40,0:37:58.55:0,59,1678	0/0:17,0:15:42.05:0,42,683	0/1:8,3:11:13.66:47,0,14	0/1:9,3:11:99:147,0,118	1/1:5,3:8:3:29,3,0	0/0:34,0:34:71.83:0,72,1956	0/0:24,0:24:48.16:0,48,1100	0/0:20,0:20:44.98:0,45,1149	./.	0/1:14,0:14:3.93:4,0,64	0/0:11,0:9:15.05:0,15,381	0/1:18,1:18:99:104,0,207	0/1:7,1:7:24.95:25,0,65	0/0:3,1:4:0:0,0,0	1/1:18,1:17:0.14:1,0,0	0/0:7,0:5:9.03:0,9,295	0/0:9,0:9:15.05:0,15,447	0/0:32,0:31:66.20:0,66,1480	./.	0/1:5,5:10:81.52:146,0,82	0/1:8,5:12:55.59:56,0,77	0/0:3,0:1:0:0,0,0
chr10	57560411	.	T	TGCGCGC	459.96	PASS	AB=0.986;AC=16;AF=0.286;AN=56;BaseQRankSum=5.976;DP=472;FS=2.050;HRun=0;HaplotypeScore=138.3429;InbreedingCoeff=0.2873;MQ=39.11;MQ0=36;MQRankSum=-5.014;QD=3.01;ReadPosRankSum=1.258;VQSLOD=2.7947;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:23:8.94:95,9,0	0/0:7,0:7:9.50:0,10,216	0/0:34,0:5:15.05:0,15,365	0/0:29,0:5:15.02:0,15,238	0/1:14,0:14:0.11:0,0,0	0/0:18,0:18:11.83:0,12,295	0/0:41,0:38:68.90:0,69,1460	0/0:17,0:15:36.12:0,36,779	0/1:11,1:12:15.53:22,0,16	0/1:13,1:12:99:209,0,203	1/1:8,0:8:2.27:59,2,0	0/0:34,0:34:71.25:0,71,1677	0/0:23,0:23:48:0,48,1117	0/0:21,0:21:48.10:0,48,1004	0/1:7,0:6:0.03:0,0,0	0/0:17,0:17:15.01:0,15,253	0/0:10,0:8:15.05:0,15,345	0/0:20,0:19:16.88:0,17,436	0/1:7,0:6:20.96:21,0,114	0/1:5,0:5:0:0,0,0	1/1:18,3:19:1.09:3,1,0	0/0:8,0:6:12.04:0,12,289	0/0:9,0:9:15.05:0,15,359	0/0:31,0:30:59.93:0,60,1437	0/1:14,0:14:0.01:0,0,0	0/1:12,0:12:99:129,0,169	0/1:13,0:12:54.01:54,0,135	0/1:3,0:1:0:0,0,0
chr10	57560777	.	CA	C	1571.17	PASS	AB=0.753;AC=31;AF=0.554;AN=56;BaseQRankSum=4.151;DP=484;FS=2.290;HRun=16;HaplotypeScore=66.4370;InbreedingCoeff=0.1440;MQ=47.78;MQ0=18;MQRankSum=4.100;QD=4.04;ReadPosRankSum=4.013;VQSLOD=0.7297;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,21:37:26.87:248,27,0	0/0:3,1:3:0:0,0,0	0/1:13,0:4:4.76:5,0,29	0/0:12,0:8:0.43:0,0,19	1/1:8,4:13:5.59:36,6,0	0/1:18,3:21:3.96:4,0,188	0/0:20,1:21:19.97:0,20,284	0/1:15,4:18:19.52:76,0,20	0/1:6,8:14:7.50:72,0,7	0/1:9,12:20:5.08:129,0,5	0/1:8,0:12:8.86:9,0,34	0/0:14,1:15:5.66:0,6,136	0/0:11,0:10:6.13:0,6,141	0/0:10,2:11:8.67:0,9,150	0/1:9,9:17:18.42:88,0,18	1/1:5,0:12:16.24:47,16,0	1/1:15,17:34:35.36:195,35,0	1/1:9,0:29:30.50:89,31,0	1/1:7,9:15:7.64:125,8,0	1/1:4,12:16:29.91:175,30,0	0/1:8,9:17:5.18:78,0,5	0/1:4,1:6:9.93:10,0,49	0/1:7,1:8:3.08:3,0,79	0/0:17,0:19:24.51:0,25,219	1/1:9,7:17:2.88:113,3,0	0/1:11,9:19:5.82:111,0,6	1/1:11,14:25:3.25:107,3,0	1/1:4,1:2:2.94:18,3,0
chr10	57562162	.	CCA	C	7144.53	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=13.333;DP=562;FS=31.642;HRun=0;HaplotypeScore=73.2379;InbreedingCoeff=0.9981;MQ=81.96;MQ0=2;MQRankSum=-2.761;QD=28.69;ReadPosRankSum=2.001;VQSLOD=3.2258;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:75.12:0,75,1134	1/1:1,10:11:23.82:298,24,0	0/0:21,0:20:54.06:0,54,712	0/0:19,0:19:47.60:0,48,624	0/0:27,0:27:69.15:0,69,1036	0/0:20,0:20:60.09:0,60,907	0/0:24,0:24:66.23:0,66,1110	1/1:5,18:23:48.10:562,48,0	1/1:1,13:13:30.10:396,30,0	1/1:2,15:17:45.10:548,45,0	1/1:1,7:8:24.03:296,24,0	0/0:29,0:29:78.22:0,78,1228	0/0:14,0:14:42.10:0,42,651	0/0:24,0:24:69.17:0,69,1054	1/1:1,23:24:57.19:753,57,0	0/0:33,0:33:96.25:0,96,1497	1/1:1,22:23:57.19:753,57,0	0/0:16,0:16:42.14:0,42,713	1/1:1,10:11:30.05:349,30,0	1/1:5,14:19:33.04:414,33,0	1/1:5,23:28:57.19:753,57,0	0/0:20,0:20:60.17:0,60,952	0/0:25,0:25:72.25:0,72,1222	0/0:15,0:15:45.10:0,45,683	1/1:2,17:19:42.09:534,42,0	1/1:3,16:19:47.61:535,48,0	1/1:2,21:23:54.18:715,54,0	1/1:1,9:9:18.06:238,18,0
chr10	57564618	.	AACCATC	A	3149.01	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=10.581;DP=734;FS=1.866;HRun=0;HaplotypeScore=150.8159;InbreedingCoeff=0.9882;MQ=89.00;MQ0=0;MQRankSum=-10.567;QD=47.00;ReadPosRankSum=-0.694;VQSLOD=3.4040;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,26:28:57.20:1383,57,0	0/0:16,0:16:48.14:0,48,1667	0/0:22,0:22:66.23:0,66,2117	0/0:34,0:34:99:0,99,3121	1/1:0,31:31:72.12:1610,72,0	0/0:39,0:39:99:0,117,4159	0/0:20,0:20:57.20:0,57,2078	0/0:45,0:45:99:0,132,4716	0/0:22,0:22:66.23:0,66,2418	0/0:23,0:23:69.23:0,69,2423	0/0:25,0:25:69.21:0,69,2391	0/0:27,0:27:81.28:0,81,2832	0/0:33,0:33:99:0,99,3532	0/0:19,0:19:54.19:0,54,1923	0/0:32,0:32:96.33:0,96,3413	0/0:25,0:25:75.24:0,75,2638	0/0:20,0:20:57.20:0,57,2040	1/1:0,8:8:12.04:295,12,0	0/0:29,0:29:87.29:0,87,2998	0/0:34,0:34:99:0,102,3714	0/0:31,0:31:93.32:0,93,3396	0/0:26,0:26:78.25:0,78,2724	0/0:26,0:26:75.26:0,75,2665	0/0:26,0:26:78.27:0,78,2760	0/0:27,0:27:81.28:0,81,2860	0/0:19,0:19:57.20:0,57,2090	0/0:39,0:39:99:0,114,4017	0/0:8,0:8:24.06:0,24,792
chr10	57568762	.	AC	A	775.35	PASS	AB=1.000;AC=31;AF=0.554;AN=56;BaseQRankSum=4.173;DP=210;FS=0.000;HRun=1;HaplotypeScore=39.4023;InbreedingCoeff=0.5811;MQ=57.08;MQ0=2;MQRankSum=-4.659;QD=5.92;ReadPosRankSum=-2.160;VQSLOD=-0.4920;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:27.62:0,28,132	1/1:2,0:2:5.92:39,6,0	0/1:11,0:7:11.15:11,0,31	0/1:10,0:2:10.68:11,0,21	0/0:11,0:11:29.86:0,30,175	0/0:7,0:7:20.98:0,21,246	0/0:4,0:4:12.04:0,12,149	1/1:18,0:18:24.14:130,24,0	1/1:8,1:9:4.16:42,4,0	1/1:4,1:5:10.80:52,11,0	1/1:3,1:4:4.78:45,5,0	0/0:11,0:11:30.10:0,30,384	0/0:3,0:3:8.94:0,9,80	0/0:3,0:3:6:0,6,74	1/1:10,2:12:21.98:163,22,0	0/0:5,0:5:14.96:0,15,165	1/1:7,0:7:6.86:29,7,0	0/0:9,0:9:11.64:0,12,69	1/1:8,1:9:1.54:46,2,0	1/1:7,2:9:12.55:138,13,0	1/1:5,0:5:1.88:9,2,0	0/0:5,0:5:12.01:0,12,139	0/0:7,0:7:18.06:0,18,229	0/1:5,0:5:3.63:4,0,33	1/1:4,2:6:16.57:140,17,0	1/1:9,1:9:2.83:32,3,0	1/1:6,0:6:1.10:34,1,0	1/1:3,0:3:7.46:42,7,0
chr10	57568770	.	CA	C	1016.92	PASS	AB=0.861;AC=28;AF=0.500;AN=56;BaseQRankSum=4.671;DP=237;FS=0.000;HRun=13;HaplotypeScore=44.4228;InbreedingCoeff=0.6559;MQ=59.04;MQ0=2;MQRankSum=-2.691;QD=7.65;ReadPosRankSum=-0.998;VQSLOD=1.4584;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:16:6.19:0,6,223	1/1:2,1:3:2.94:21,3,0	0/0:13,0:8:3.52:0,4,95	0/0:12,0:4:9.48:0,9,85	0/0:12,0:12:32.99:0,33,305	0/0:7,0:8:14.83:0,15,123	0/0:2,0:4:2.01:0,2,38	1/1:18,6:24:23.64:158,24,0	1/1:4,4:8:8.94:66,9,0	1/1:4,4:8:14.46:108,14,0	1/1:1,3:4:8.94:66,9,0	0/1:9,2:11:13.82:14,0,192	0/0:2,0:2:6.01:0,6,58	0/0:2,0:2:5.96:0,6,49	1/1:7,5:12:8.91:65,9,0	0/0:2,0:5:8.64:0,9,48	0/1:6,1:7:12.07:20,0,12	0/0:11,0:11:24.88:0,25,225	1/1:7,4:11:17.45:115,17,0	1/1:3,7:10:17.67:128,18,0	1/1:1,5:6:11.93:87,12,0	0/0:6,0:6:18.03:0,18,175	0/0:8,0:8:18.03:0,18,175	0/0:5,0:5:8.84:0,9,68	1/1:2,6:8:17.85:129,18,0	1/1:4,6:9:17.88:131,18,0	1/1:3,4:8:12.49:90,12,0	1/1:2,1:3:2.95:22,3,0
chr10	57569207	.	CTTT	C	1870.43	PASS	AB=0.664;AC=22;AF=0.393;AN=56;BaseQRankSum=3.416;DP=600;FS=4.511;HRun=18;HaplotypeScore=98.2695;InbreedingCoeff=0.6450;MQ=76.95;MQ0=7;MQRankSum=-1.429;QD=7.28;ReadPosRankSum=6.111;VQSLOD=-0.5227;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:34:79.06:0,79,1149	1/1:2,3:4:5.87:59,6,0	0/0:52,0:31:32.51:0,33,518	0/0:37,0:20:4.57:0,5,177	0/0:20,0:22:48.98:0,49,681	0/0:12,0:18:31.28:0,31,390	0/0:24,0:24:58.67:0,59,777	0/1:10,11:21:0.39:280,0,0	1/1:4,9:14:16.99:164,17,0	1/1:11,6:17:10.83:116,11,0	0/1:8,12:21:4.61:116,0,5	0/0:17,0:18:46.01:0,46,645	0/0:17,0:17:36.12:0,36,515	0/0:18,0:20:33.06:0,33,447	0/1:11,14:26:1.92:144,0,2	0/0:20,0:32:48.58:0,49,669	1/1:8,16:25:26.34:252,26,0	0/0:9,0:9:12.48:0,12,136	0/1:8,7:16:5.70:196,0,6	0/1:13,8:22:5.86:92,0,6	1/1:8,10:21:11.74:130,12,0	0/0:16,0:20:42.11:0,42,637	0/0:15,0:16:32.94:0,33,370	0/0:11,0:19:30.08:0,30,459	1/1:4,12:16:19.58:217,20,0	1/1:8,7:15:8.04:87,8,0	1/1:12,8:22:18.85:190,19,0	0/1:8,5:14:1.05:24,0,1
chr10	57570981	.	CCT	C	10033.91	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=15.662;DP=775;FS=0.000;HRun=0;HaplotypeScore=97.8603;InbreedingCoeff=0.9983;MQ=69.94;MQ0=6;MQRankSum=-0.416;QD=37.16;ReadPosRankSum=2.447;VQSLOD=6.9992;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,144,2497	0/0:8,0:8:24.08:0,24,431	0/0:31,0:22:51.61:0,52,886	0/0:39,0:29:75.62:0,76,1158	0/0:26,0:26:72.25:0,72,1285	0/0:26,0:26:40.71:0,41,1092	0/0:22,0:22:65.89:0,66,1119	0/0:39,0:39:99:0,108,1908	1/1:2,29:30:72.24:1008,72,0	1/1:1,19:20:57.19:799,57,0	1/1:1,7:8:18.06:252,18,0	0/0:28,0:28:78.27:0,78,1381	0/0:37,0:37:99:0,108,1894	0/0:28,0:28:81.28:0,81,1443	1/1:1,38:39:99:1555,111,0	0/0:52,0:52:99:0,144,2562	0/0:28,0:28:78.27:0,78,1396	0/0:20,0:19:57.19:0,57,1002	1/1:2,16:18:50.83:666,51,0	1/1:1,18:19:54.18:756,54,0	1/1:1,46:47:99:1680,120,0	0/0:17,0:17:51.17:0,51,875	0/0:20,0:20:57.19:0,57,975	0/0:29,0:29:72.25:0,72,1262	1/1:0,14:14:42.14:588,42,0	1/1:1,29:30:87.29:1216,87,0	1/1:3,29:32:84.28:1176,84,0	1/1:4,8:12:24.08:336,24,0
chr10	57571548	.	GT	G	1041.71	PASS	AC=8;AF=0.154;AN=52;BaseQRankSum=3.614;DP=273;FS=9.338;HRun=11;HaplotypeScore=31.4703;InbreedingCoeff=0.7683;MQ=69.06;MQ0=1;MQRankSum=-0.557;QD=14.88;ReadPosRankSum=-0.543;VQSLOD=2.6030;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:15,1:16:17.82:0,18,368	1/1:0,2:2:5.99:49,6,0	0/0:11,0:4:6.82:0,7,51	0/0:9,0:6:0.47:0,0,1	0/0:9,0:9:24.06:0,24,256	0/0:11,0:11:30.04:0,30,307	0/0:5,0:5:12.03:0,12,128	1/1:7,22:29:62.90:517,63,0	0/0:3,0:3:9.02:0,9,96	0/0:6,0:6:15.03:0,15,149	0/0:11,0:11:26.98:0,27,273	0/0:2,0:2:6.02:0,6,64	0/0:5,0:5:9.02:0,9,91	0/0:3,0:3:3.01:0,3,32	0/0:7,0:7:15.04:0,15,160	1/1:4,5:9:14.97:123,15,0	1/1:4,25:30:61.94:498,62,0	0/0:21,0:21:51.09:0,51,531	0/0:16,0:16:42.05:0,42,435	0/0:10,0:11:17.90:0,18,169	./.	./.	0/0:3,0:3:9.02:0,9,96	0/0:4,0:4:9.02:0,9,96	0/0:16,0:16:39.06:0,39,398	0/0:11,0:11:30.08:0,30,320	0/0:10,0:10:27.07:0,27,287	0/0:11,0:11:30.08:0,30,320
chr10	57572347	.	TC	T	3175.08	PASS	AB=0.778;AC=20;AF=0.357;AN=56;BaseQRankSum=0.168;DP=556;FS=15.433;HRun=10;HaplotypeScore=75.3525;InbreedingCoeff=0.7748;MQ=78.69;MQ0=1;MQRankSum=1.477;QD=13.63;ReadPosRankSum=2.559;VQSLOD=2.1376;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:26.86:0,27,249	0/0:5,0:5:14.95:0,15,116	0/0:51,0:27:23.24:0,23,263	0/0:44,0:25:2.33:0,2,59	0/0:11,0:11:14.64:0,15,142	0/0:27,0:27:59.72:0,60,538	0/0:12,0:12:20.94:0,21,197	0/0:21,0:21:29.56:0,30,250	0/1:14,0:14:17.27:41,0,17	1/1:5,16:21:53.75:438,54,0	1/1:4,14:18:21.82:278,22,0	0/0:22,0:22:23.78:0,24,338	0/0:15,0:15:33.07:0,33,353	0/0:17,0:17:4.23:0,4,334	1/1:5,22:27:28.19:346,28,0	0/0:14,0:15:8.30:0,8,43	0/0:13,0:13:8.96:0,9,68	0/0:8,0:8:17.32:0,17,96	1/1:5,11:16:32.88:274,33,0	1/1:7,17:24:11.73:286,12,0	1/1:3,20:23:41.99:364,42,0	0/0:12,0:12:29.15:0,29,260	0/0:19,0:19:30.84:0,31,362	0/0:6,0:6:14.93:0,15,137	1/1:4,15:19:23.99:208,24,0	1/1:8,30:38:83.53:684,84,0	1/1:6,17:23:35.95:306,36,0	0/1:2,8:10:8.76:158,0,9
chr10	57573534	.	TCTCTCTCTCTCC	T	1369.62	PASS	AB=0.941;AC=16;AF=0.308;AN=52;BaseQRankSum=2.915;DP=482;FS=10.721;HRun=0;HaplotypeScore=137.9877;InbreedingCoeff=0.2262;MQ=38.63;MQ0=130;MQRankSum=-0.633;QD=5.93;ReadPosRankSum=1.453;VQSLOD=2.1484;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:13:10:0,10,59	0/0:14,0:7:11.89:0,12,96	./.	./.	0/0:20,1:16:9.17:0,9,67	0/0:27,0:23:27.20:0,27,529	0/0:24,0:12:15.76:0,16,209	1/1:16,0:7:1.11:41,1,0	0/1:18,0:13:22.62:23,0,64	0/1:19,0:15:1.35:198,0,1	1/1:17,0:15:4.90:81,5,0	0/0:20,0:16:31.13:0,31,568	0/0:21,0:16:22.79:0,23,944	0/0:18,0:15:20.52:0,21,640	0/1:23,1:20:7.47:33,0,7	0/0:5,0:4:3.01:0,3,42	0/0:14,0:10:20.80:0,21,140	1/1:13,0:6:5.99:111,6,0	1/1:8,1:8:12.41:288,12,0	0/1:13,1:9:0:0,0,0	0/0:11,0:7:6.91:0,7,219	0/0:10,0:7:6.02:0,6,97	0/0:22,0:16:9:0,9,192	0/0:23,0:15:20.37:0,20,364	0/1:29,1:21:13.97:14,0,25	0/1:11,8:16:99:207,0,127	0/1:24,1:21:32.91:246,0,33	0/1:26,0:14:87.91:281,0,88
chr10	57573536	.	TCTCTCTCTCC	T	1868.81	PASS	AB=0.902;AC=21;AF=0.420;AN=50;BaseQRankSum=1.409;DP=476;FS=25.692;HRun=0;HaplotypeScore=126.0411;InbreedingCoeff=0.4161;MQ=38.50;MQ0=131;MQRankSum=-1.922;QD=7.57;ReadPosRankSum=0.234;VQSLOD=0.8982;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:18,1:13:27.82:28,0,29	0/0:14,0:7:6:0,6,65	./.	./.	0/0:10,9:14:5.67:0,6,43	0/0:28,0:24:6.39:0,6,336	0/0:24,0:12:15.76:0,16,155	1/1:17,0:7:2.90:44,3,0	1/1:15,2:12:11.20:79,11,0	1/1:17,2:15:8.29:345,8,0	0/1:15,2:15:0.16:38,0,0	0/0:20,0:16:28:0,28,409	0/0:21,0:16:22.44:0,22,812	0/0:18,0:15:20.52:0,21,560	1/1:11,12:19:4.45:40,4,0	0/0:5,0:4:0:0,0,0	0/1:14,0:10:5.21:5,0,85	1/1:13,0:6:5.99:97,6,0	1/1:10,1:9:25.09:338,25,0	./.	0/0:11,0:7:1.17:0,1,177	0/0:10,0:7:4.81:0,5,30	0/0:22,0:16:9:0,9,141	0/0:23,0:15:20.11:0,20,268	1/1:26,2:19:8.01:59,8,0	0/1:18,1:16:99:221,0,106	1/1:22,2:20:16.70:361,17,0	0/1:16,8:12:61.54:380,0,62
chr10	57573545	.	CCCCA	C	1693.01	PASS	AB=0.995;AC=33;AF=0.635;AN=52;BaseQRankSum=1.266;DP=484;FS=32.780;HRun=0;HaplotypeScore=103.7201;InbreedingCoeff=0.2985;MQ=38.18;MQ0=150;MQRankSum=-0.221;QD=4.44;ReadPosRankSum=1.381;VQSLOD=0.3865;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:13:11.97:0,12,158	0/0:17,0:9:17.61:0,18,216	./.	./.	0/0:22,0:16:11.50:0,11,196	0/1:23,0:19:2.67:3,0,79	0/1:22,0:11:21.57:68,0,22	1/1:20,0:10:5.67:117,6,0	1/1:16,0:12:10.10:164,10,0	1/1:11,10:15:17.30:312,17,0	1/1:7,2:17:2.06:16,2,0	0/1:18,0:13:5.28:134,0,5	0/0:22,0:17:24.68:0,25,381	0/0:18,0:15:12.34:0,12,400	1/1:24,0:19:0.25:51,0,0	0/0:4,0:3:0:0,0,0	0/1:15,0:10:7.93:8,0,246	1/1:8,0:6:5.97:55,6,0	1/1:5,6:8:20.70:206,21,0	1/1:10,0:10:2.97:20,3,0	0/1:11,0:5:16.24:47,0,16	1/1:11,0:6:2.92:19,3,0	0/1:21,0:14:2.16:5,0,2	1/1:22,0:13:13.96:90,14,0	1/1:29,0:21:5.19:111,5,0	1/1:17,0:13:19.23:238,19,0	1/1:10,13:18:12.92:109,13,0	0/1:26,1:12:17.55:83,0,18
chr10	57573547	.	CCACA	C	1297.95	PASS	AB=0.987;AC=27;AF=0.540;AN=50;BaseQRankSum=0.737;DP=498;FS=3.833;HRun=0;HaplotypeScore=108.9341;InbreedingCoeff=0.4861;MQ=38.28;MQ0=151;MQRankSum=2.389;QD=4.38;ReadPosRankSum=0.784;VQSLOD=2.1213;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:16:18.53:0,19,369	0/0:17,0:10:20.74:0,21,411	./.	./.	0/0:22,0:16:11.50:0,11,276	0/0:17,6:19:5.61:0,6,104	1/1:23,0:11:12:185,12,0	0/0:24,0:13:12.02:0,12,158	1/1:17,1:14:9.12:189,9,0	0/1:22,0:15:20.08:182,0,20	0/0:19,0:17:5.07:0,5,29	1/1:19,0:13:18.06:280,18,0	0/0:22,0:17:7.28:0,7,318	0/0:18,0:15:2.97:0,3,424	0/1:23,0:19:1.45:25,0,1	./.	0/0:16,0:11:18.06:0,18,381	1/1:13,0:6:3:28,3,0	1/1:11,0:8:9.02:120,9,0	1/1:14,0:9:0.47:1,0,0	1/1:11,0:5:3.01:35,3,0	0/0:6,6:7:0:0,0,0	1/1:14,0:14:2.55:20,3,0	1/1:23,0:14:8.90:141,9,0	1/1:19,0:21:5.48:60,5,0	1/1:18,0:13:12.02:148,12,0	1/1:23,0:18:2.04:34,2,0	0/1:27,0:12:14.42:14,0,50
chr10	57574601	.	GGAGAGAGAGAGAGA	G	493.98	PASS	AB=0.870;AC=7;AF=0.146;AN=48;BaseQRankSum=3.956;DP=585;FS=37.367;HRun=0;HaplotypeScore=198.9970;InbreedingCoeff=0.3017;MQ=67.51;MQ0=27;MQRankSum=-3.991;QD=5.31;ReadPosRankSum=-0.315;VQSLOD=1.4979;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	0/0:74,0:35:0:0,0,0	1/1:16,0:22:6.02:195,6,0	0/0:11,0:11:3.01:0,3,90	0/0:28,0:28:22.30:0,22,828	0/0:25,0:24:0:0,0,0	0/0:14,0:18:6.02:0,6,199	0/1:15,0:16:54.35:54,0,128	./.	0/0:18,0:17:12.02:0,12,487	0/0:19,0:19:15.05:0,15,645	0/0:18,0:18:9.02:0,9,185	0/0:27,0:27:15.05:0,15,337	0/1:16,1:22:25.76:141,0,26	1/1:11,5:18:6.02:212,6,0	0/0:13,0:13:2.22:0,2,7	0/1:13,0:13:8.16:8,0,141	0/0:10,0:10:6.02:0,6,117	0/0:28,0:26:19.23:0,19,383	0/0:14,0:14:12.04:0,12,559	0/0:15,0:14:9.03:0,9,488	0/0:22,0:25:39.12:0,39,2064	0/0:9,0:8:6.02:0,6,241	0/0:11,0:12:15.04:0,15,287	0/0:14,0:14:18.06:0,18,575	0/0:11,0:10:14.54:0,15,571
chr10	57575458	.	TAAATAAATAAATAAATAAATAAATA	T	939.27	PASS	AC=10;AF=0.278;AN=36;BaseQRankSum=2.759;DP=192;FS=0.000;HRun=0;HaplotypeScore=114.5721;InbreedingCoeff=0.6009;MQ=51.84;MQ0=6;MQRankSum=1.262;QD=14.91;ReadPosRankSum=-1.210;VQSLOD=2.0326;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:8:15.03:0,15,551	./.	./.	./.	0/0:10,0:10:15.05:0,15,773	0/0:7,0:7:18.06:0,18,1482	0/0:5,0:5:3.01:0,3,200	0/0:24,0:22:19.11:0,19,247	./.	./.	./.	0/0:3,0:3:6.02:0,6,654	0/0:4,0:4:6.02:0,6,577	0/0:2,0:2:6.02:0,6,634	./.	0/0:5,0:5:3.01:0,3,44	0/0:23,0:23:9.03:0,9,653	0/0:12,0:12:23.57:0,24,1441	1/1:14,6:15:18.91:361,19,0	1/1:1,4:5:5.95:213,6,0	./.	./.	0/0:1,0:1:3.01:0,3,334	0/0:3,0:3:3.01:0,3,165	1/1:8,7:15:3.01:193,3,0	1/1:3,5:8:11.99:107,12,0	./.	1/1:7,8:15:3.01:193,3,0
chr10	57575478	.	TAAATA	T	1864.81	PASS	AB=1.000;AC=32;AF=0.667;AN=48;BaseQRankSum=2.648;DP=172;FS=1.833;HRun=0;HaplotypeScore=42.1680;InbreedingCoeff=0.3076;MQ=49.77;MQ0=5;MQRankSum=-2.382;QD=12.77;ReadPosRankSum=-3.040;VQSLOD=1.3758;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,0:7:7.85:154,8,0	1/1:1,0:1:3.01:36,3,0	./.	./.	0/1:9,0:9:8.38:88,0,8	0/0:7,0:7:21.07:0,21,381	0/0:5,0:5:6.31:0,6,119	1/1:28,0:25:57.17:684,57,0	1/1:4,0:4:6.02:72,6,0	1/1:1,0:1:3.01:36,3,0	./.	0/0:3,0:3:6.02:0,6,158	0/0:4,0:4:9.03:0,9,173	0/0:3,0:3:9.03:0,9,174	1/1:3,0:3:3.01:36,3,0	0/1:3,0:3:26.96:27,0,72	1/1:1,23:24:9.03:183,9,0	0/1:13,0:13:67.45:67,0,135	1/1:12,0:9:18.91:203,19,0	1/1:4,0:4:1.23:34,1,0	1/1:3,0:3:6.02:72,6,0	./.	0/0:1,0:1:3.01:0,3,91	0/1:2,0:2:29.86:30,0,35	1/1:11,0:11:3.01:35,3,0	1/1:6,0:6:8.48:83,8,0	1/1:4,0:4:12.04:144,12,0	1/1:11,0:11:3.01:36,3,0
chr10	57575482	.	TA	T	1902.84	PASS	AB=0.822;AC=35;AF=0.729;AN=48;BaseQRankSum=5.256;DP=167;FS=1.913;HRun=4;HaplotypeScore=30.5923;InbreedingCoeff=0.3895;MQ=50.58;MQ0=4;MQRankSum=-2.552;QD=13.03;ReadPosRankSum=-1.837;VQSLOD=0.8575;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,4:7:18.52:213,19,0	1/1:0,1:1:3.01:36,3,0	./.	./.	1/1:6,3:9:15.02:156,15,0	0/0:7,0:7:21.07:0,21,282	0/1:5,0:5:11.92:12,0,111	1/1:5,22:24:63.18:748,63,0	1/1:1,2:3:6.02:72,6,0	1/1:0,1:1:3.01:36,3,0	./.	0/0:3,0:3:6.02:0,6,84	0/0:3,0:3:9.03:0,9,124	0/0:3,0:3:9.03:0,9,124	1/1:1,2:3:3.01:36,3,0	0/1:3,1:4:23.96:24,0,110	1/1:23,0:23:8.71:48,9,0	1/1:12,2:14:16.27:112,16,0	1/1:10,0:9:18.75:176,19,0	1/1:4,0:4:0.72:6,1,0	1/1:1,2:3:6.02:72,6,0	./.	0/0:2,0:2:6.01:0,6,69	0/1:1,1:2:29.83:30,0,35	1/1:9,0:9:3:28,3,0	1/1:6,0:6:8.48:83,8,0	1/1:0,4:4:12.04:144,12,0	1/1:11,0:11:3:27,3,0
chr10	57575483	.	AAAATAAAT	A	530.04	PASS	AB=0.929;AC=9;AF=0.196;AN=46;BaseQRankSum=1.608;DP=169;FS=2.879;HRun=0;HaplotypeScore=57.4892;InbreedingCoeff=0.1664;MQ=50.70;MQ0=4;MQRankSum=-0.553;QD=10.00;ReadPosRankSum=0.986;VQSLOD=1.6564;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:7,0:7:17.64:246,0,18	0/0:1,0:1:0:0,0,0	./.	./.	0/1:4,5:9:65.11:201,0,65	0/0:7,0:7:18.06:0,18,578	0/0:5,0:5:6.02:0,6,155	0/0:28,0:25:9.23:0,9,55	0/0:3,0:3:0:0,0,0	0/0:1,0:1:0:0,0,0	./.	0/0:3,0:3:6.02:0,6,232	0/0:3,0:3:9.03:0,9,273	0/0:3,0:3:9.03:0,9,313	./.	0/0:4,0:4:9.03:0,9,220	0/0:23,0:23:7.11:0,7,25	0/0:14,0:14:21.38:0,21,354	0/1:11,0:10:42.50:45,0,42	0/1:4,0:4:45.34:45,0,63	0/0:3,0:3:2.69:0,3,36	./.	0/0:2,0:2:6.02:0,6,168	0/1:2,0:2:0:0,0,0	1/1:9,0:9:3.01:52,3,0	0/0:6,0:6:2.67:0,3,11	0/0:4,0:4:0:0,0,0	1/1:11,0:11:3.01:53,3,0
chr10	57576824	.	C	CTTTTGTTTT	7490.28	PASS	AB=0.808;AC=19;AF=0.339;AN=56;BaseQRankSum=15.333;DP=632;FS=0.000;HRun=0;HaplotypeScore=184.2195;InbreedingCoeff=0.2615;MQ=59.83;MQ0=2;MQRankSum=-14.291;QD=22.29;ReadPosRankSum=-7.169;VQSLOD=1.0491;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:70.60:0,71,2390	0/1:10,0:9:31.74:183,0,32	0/0:18,0:16:32.43:0,32,774	0/0:17,0:12:23.14:0,23,593	0/0:23,0:23:69.23:0,69,1909	0/0:27,0:27:78.17:0,78,2072	0/0:27,0:27:72.10:0,72,1924	0/1:33,0:29:64.83:942,0,65	1/1:13,0:12:32.93:692,33,0	0/1:33,0:32:28.06:1032,0,28	0/1:3,0:29:30.06:154,0,30	0/0:8,0:8:21.07:0,21,614	0/0:9,0:9:24.08:0,24,565	0/0:22,0:23:60.20:0,60,1558	0/1:20,0:20:8.85:467,0,9	0/0:27,0:26:72.21:0,72,1828	0/1:6,0:24:25.89:206,0,26	0/0:12,0:12:36.12:0,36,1007	1/1:26,0:22:23.64:859,24,0	0/1:29,0:28:55.99:757,0,56	1/1:14,0:13:4.03:332,4,0	0/0:28,0:28:78.74:0,79,2244	0/0:17,0:19:53.74:0,54,1315	0/0:26,0:26:69.15:0,69,1803	1/1:19,0:19:15.73:666,16,0	1/1:29,0:29:18.16:863,18,0	0/1:5,1:33:62.40:123,0,62	0/1:9,0:18:80.37:215,0,80
chr10	57581879	.	TG	T	688.87	PASS	AB=0.929;AC=14;AF=0.250;AN=56;BaseQRankSum=0.148;DP=360;FS=4.377;HRun=11;HaplotypeScore=53.3591;InbreedingCoeff=0.1982;MQ=81.03;MQ0=2;MQRankSum=-0.194;QD=4.10;ReadPosRankSum=3.742;VQSLOD=-0.1042;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,9:15:31.03:233,31,0	0/0:5,0:5:2.98:0,3,21	0/1:12,0:13:2.16:2,0,82	0/1:14,1:14:17.15:17,0,132	1/1:1,4:5:8.99:74,9,0	0/1:15,1:16:6.60:7,0,142	0/1:20,3:23:10.22:10,0,291	0/0:5,0:8:5.81:0,6,34	0/0:15,0:18:23.64:0,24,175	0/0:2,0:5:2.88:0,3,15	0/0:1,0:2:0:0,0,0	0/0:19,0:19:30.03:0,30,290	0/1:14,1:15:0.55:1,0,192	0/0:12,0:12:18.05:0,18,192	0/0:10,0:18:20.50:0,21,152	0/1:11,2:13:9.61:10,0,112	0/0:11,0:22:8.64:0,9,46	1/1:6,20:26:56.93:468,57,0	0/1:11,1:14:9.78:10,0,95	0/0:5,0:5:5.92:0,6,39	0/0:8,0:15:5.88:0,6,47	0/0:13,0:13:15.51:0,16,161	0/0:2,0:2:3.01:0,3,32	0/1:12,1:13:9.62:10,0,99	0/0:9,1:13:11.78:0,12,86	0/0:8,0:16:23.57:0,24,157	0/0:6,0:13:14.37:0,14,88	0/0:5,0:5:11.79:0,12,92
chr10	57581968	.	CTTTTCCTTCCTT	C	11565.64	PASS	AB=1.000;AC=24;AF=0.429;AN=56;BaseQRankSum=3.904;DP=548;FS=8.763;HRun=0;HaplotypeScore=214.2275;InbreedingCoeff=0.6765;MQ=61.70;MQ0=6;MQRankSum=0.526;QD=42.84;ReadPosRankSum=3.727;VQSLOD=2.9154;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:27:75.68:0,76,2240	0/1:12,0:12:99:486,0,109	0/0:24,0:17:45.13:0,45,1031	0/0:15,0:9:9.36:0,9,283	0/0:25,0:27:66.21:0,66,1836	0/0:21,0:21:54.17:0,54,2088	0/0:16,0:16:48.04:0,48,1090	1/1:22,0:21:57.18:1198,57,0	1/1:0,18:18:9.03:347,9,0	1/1:29,0:29:79.98:1396,80,0	1/1:21,0:20:47.74:661,48,0	0/0:21,0:21:60.20:0,60,1852	0/0:16,0:16:45.15:0,45,1583	0/0:19,0:19:48.11:0,48,1814	1/1:12,6:18:51.18:1511,51,0	0/0:19,0:19:57.18:0,57,1592	0/1:14,0:14:13.18:520,0,13	0/0:26,0:26:34.60:0,35,1807	1/1:27,0:24:45.21:1060,45,0	1/1:14,0:14:38.79:726,39,0	0/1:8,0:8:10.51:223,0,11	0/0:19,0:19:46.11:0,46,1203	0/0:10,0:10:29.99:0,30,693	0/0:16,0:18:2.41:0,2,893	0/1:27,0:27:99:499,0,897	1/1:29,1:30:68.40:1281,68,0	1/1:20,1:21:59.17:1196,59,0	1/1:9,0:9:23.46:461,23,0
chr10	57581969	.	TTTTCCTTC	T	14705.13	PASS	AB=0.991;AC=28;AF=0.500;AN=56;BaseQRankSum=2.331;DP=547;FS=10.398;HRun=0;HaplotypeScore=161.6955;InbreedingCoeff=0.6990;MQ=61.65;MQ0=7;MQRankSum=-0.797;QD=49.18;ReadPosRankSum=2.509;VQSLOD=4.3330;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:71.48:0,71,1949	0/1:11,0:12:43.02:557,0,43	0/0:23,0:16:45.15:0,45,1047	0/0:15,0:9:13.01:0,13,295	0/0:27,0:27:66.21:0,66,1483	0/0:21,0:21:54.14:0,54,1675	0/0:16,0:16:45.51:0,46,1032	1/1:1,21:21:56.99:1205,57,0	1/1:18,0:18:9.03:211,9,0	1/1:0,29:29:81.28:1976,81,0	1/1:0,20:20:48.08:947,48,0	0/0:21,0:21:42.45:0,42,1509	0/0:16,0:16:48.16:0,48,1414	0/0:19,0:19:48.03:0,48,1511	1/1:15,0:17:51.18:1246,51,0	0/0:19,0:19:57.16:0,57,1257	1/1:13,0:14:19.52:568,20,0	0/0:26,0:26:31.38:0,31,1589	1/1:5,22:24:65.84:1392,66,0	1/1:10,4:14:42.14:1032,42,0	1/1:8,0:8:3.27:452,3,0	0/1:20,0:20:7.27:7,0,986	0/1:10,0:10:8.45:8,0,579	0/0:18,0:18:42.84:0,43,885	0/1:24,0:26:99:664,0,452	1/1:2,29:31:93.32:2363,93,0	1/1:17,4:21:63.22:1481,63,0	1/1:10,0:9:24.08:594,24,0
chr10	57581971	.	TTC	T	729.13	PASS	AB=0.980;AC=20;AF=0.357;AN=56;BaseQRankSum=11.872;DP=545;FS=20.654;HRun=0;HaplotypeScore=149.3998;InbreedingCoeff=0.2886;MQ=61.66;MQ0=7;MQRankSum=1.128;QD=2.56;ReadPosRankSum=4.585;VQSLOD=0.5213;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:71.06:0,71,1337	0/1:11,1:12:29.29:44,0,29	0/0:23,0:16:45.02:0,45,768	0/0:15,0:9:13.37:0,13,232	0/0:26,0:26:39.35:0,39,878	0/0:21,0:21:54.12:0,54,979	0/0:16,0:16:44.64:0,45,805	0/1:22,0:21:10.88:11,0,27	1/1:18,0:18:8.52:42,9,0	1/1:29,0:29:16.22:116,16,0	0/1:20,0:20:0.71:1,0,85	0/0:22,0:22:60.13:0,60,1007	0/0:16,0:16:48.16:0,48,887	0/0:18,0:18:45.13:0,45,870	1/1:17,0:17:31.33:124,31,0	0/0:19,0:19:54.05:0,54,742	0/1:12,2:14:27.43:81,0,27	0/0:24,1:25:22.66:0,23,1092	0/1:26,0:23:9.82:62,0,10	0/1:14,0:14:1.26:43,0,1	0/1:8,0:8:14.35:24,0,14	0/0:20,0:20:51.17:0,51,941	0/0:12,0:12:30.10:0,30,546	0/1:18,0:18:28.97:29,0,642	0/1:25,0:25:29.26:29,0,95	1/1:31,0:31:38.17:213,38,0	0/1:21,0:21:15.42:61,0,15	1/1:10,0:9:12.12:34,12,0
chr10	57581977	.	C	CCTTCCTTT	1708.29	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=-7.527;DP=553;FS=0.000;HRun=0;HaplotypeScore=208.3146;InbreedingCoeff=0.4911;MQ=59.48;MQ0=8;MQRankSum=1.329;QD=16.27;ReadPosRankSum=-3.282;VQSLOD=2.4253;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:30:80.48:799,80,0	0/1:12,0:12:0.11:0,0,198	0/0:20,0:14:22.36:0,22,180	0/0:13,0:7:5:0,5,67	1/1:3,23:32:63.86:882,64,0	0/0:15,0:21:48.07:0,48,769	0/0:14,0:15:40.18:0,40,338	0/0:23,0:22:44.66:0,45,329	0/0:18,0:18:9.03:0,9,167	0/0:29,0:29:63.37:0,63,563	0/0:20,0:20:41.44:0,41,317	0/0:15,0:23:63.03:0,63,752	0/0:16,0:16:47.25:0,47,681	0/0:13,0:18:8.59:0,9,398	0/0:15,0:15:44.86:0,45,493	0/1:18,0:18:99:151,0,230	0/1:13,0:13:9.40:9,0,175	0/0:24,0:24:66.39:0,66,811	0/0:27,0:23:18.07:0,18,371	0/0:15,0:17:38.54:0,39,418	0/0:6,0:7:16.23:0,16,150	0/0:14,0:20:50.74:0,51,498	0/0:8,0:14:29.85:0,30,274	0/0:17,0:18:27.05:0,27,322	0/0:26,0:26:4.54:0,5,604	0/0:31,0:31:72.30:0,72,889	0/0:21,0:21:35.04:0,35,533	0/0:12,0:11:23.98:0,24,203
chr10	57581982	.	CTTT	C	221.59	PASS	AB=0.881;AC=3;AF=0.054;AN=56;BaseQRankSum=1.062;DP=547;FS=4.330;HRun=3;HaplotypeScore=158.0902;InbreedingCoeff=-0.0691;MQ=58.10;MQ0=13;MQRankSum=-1.048;QD=4.71;ReadPosRankSum=1.025;VQSLOD=-0.1344;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:85:0,85,870	0/0:12,0:12:33.07:0,33,487	0/0:13,0:7:18:0,18,182	0/0:11,0:7:5.57:0,6,92	0/0:30,0:30:66.09:0,66,1108	0/0:20,0:20:33.44:0,33,742	0/0:14,0:14:31.20:0,31,473	0/0:28,0:22:39.43:0,39,428	0/0:18,0:18:10.45:0,10,47	0/0:29,0:29:78.70:0,79,946	0/0:21,0:21:42.42:0,42,458	0/0:21,0:21:7.52:0,8,461	0/0:15,0:15:45.15:0,45,862	0/0:16,0:16:39.05:0,39,687	0/0:16,0:16:45.26:0,45,440	0/1:8,10:18:40.85:286,0,41	0/0:15,0:15:39:0,39,470	0/0:24,0:24:12.12:0,12,447	0/0:28,0:23:57.64:0,58,697	0/0:21,0:21:57.15:0,57,733	0/0:7,0:7:21.04:0,21,256	0/0:19,0:19:2.75:0,3,461	0/1:13,0:13:4.71:5,0,245	0/1:16,0:16:22.47:22,0,315	0/0:26,0:26:75.11:0,75,1424	0/0:31,0:31:84.19:0,84,982	0/0:22,0:22:62.70:0,63,736	0/0:12,0:11:30.10:0,30,440
chr10	57583549	.	TG	T	7588.64	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=13.569;DP=660;FS=3.949;HRun=5;HaplotypeScore=66.2061;InbreedingCoeff=0.9998;MQ=89.92;MQ0=0;MQRankSum=-6.232;QD=30.60;ReadPosRankSum=3.293;VQSLOD=5.6264;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,123,1664	0/0:16,0:16:42.14:0,42,575	0/0:27,0:27:75.23:0,75,1000	0/0:24,0:24:52.05:0,52,839	0/0:14,0:14:36.11:0,36,477	0/0:23,0:23:69.22:0,69,928	0/0:15,0:15:45.15:0,45,614	0/0:34,0:34:99:0,99,1306	1/1:1,19:20:51.14:574,51,0	1/1:3,19:22:63.15:700,63,0	1/1:1,18:19:48.14:544,48,0	0/0:23,0:23:63.20:0,63,845	0/0:21,0:21:60.19:0,60,802	0/0:21,0:21:54.18:0,54,734	1/1:1,26:27:75.21:851,75,0	0/0:30,0:30:90.30:0,90,1231	0/0:39,0:39:99:0,111,1483	0/0:25,0:25:63.21:0,63,858	1/1:1,17:18:51.15:578,51,0	1/1:1,18:19:57.16:645,57,0	1/1:3,43:46:99:1395,123,0	0/0:19,0:19:51.17:0,51,697	0/0:17,0:17:51.17:0,51,693	0/0:19,0:19:57.18:0,57,762	1/1:1,17:18:48.14:543,48,0	1/1:1,21:22:57.14:636,57,0	1/1:1,27:28:71.77:816,72,0	1/1:0,9:9:27.08:306,27,0
chr10	57583554	.	GT	G	1949.97	PASS	AB=0.979;AC=20;AF=0.357;AN=56;BaseQRankSum=18.532;DP=664;FS=2.496;HRun=1;HaplotypeScore=84.1737;InbreedingCoeff=0.8155;MQ=90.30;MQ0=0;MQRankSum=-8.128;QD=7.83;ReadPosRankSum=5.268;VQSLOD=1.1980;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,138,1981	0/0:14,0:14:42.14:0,42,645	0/0:26,0:26:78.18:0,78,1146	0/0:26,0:26:34.66:0,35,943	0/0:12,0:12:36.12:0,36,553	0/0:23,0:23:69.23:0,69,1076	0/0:17,0:17:51.12:0,51,727	0/0:38,0:38:99:0,114,1654	0/1:22,1:23:17.83:160,0,18	1/1:20,2:22:21.24:186,21,0	1/1:19,0:19:26.96:164,27,0	0/0:21,0:21:60.20:0,60,927	0/0:21,0:21:63.16:0,63,895	0/0:20,0:20:60.17:0,60,892	1/1:26,0:26:64.69:253,65,0	0/0:32,0:32:96.30:0,96,1455	0/0:39,0:39:99:0,117,1733	0/0:23,0:23:69.17:0,69,1019	1/1:18,0:18:15.14:122,15,0	1/1:18,1:19:50.81:259,51,0	1/1:43,0:43:99:389,104,0	0/0:17,0:17:51.12:0,51,737	0/0:18,0:18:54.10:0,54,754	0/0:22,0:22:66.06:0,66,883	1/1:18,0:18:41.81:174,42,0	0/1:24,0:24:32.46:88,0,32	1/1:27,0:27:63.81:287,64,0	1/1:10,0:10:3.07:79,3,0
chr10	57584900	.	CGGCT	C	4041.96	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=11.518;DP=812;FS=5.725;HRun=0;HaplotypeScore=131.7054;InbreedingCoeff=0.9998;MQ=90.40;MQ0=0;MQRankSum=-4.730;QD=48.12;ReadPosRankSum=0.551;VQSLOD=4.4291;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:58:99:0,168,4406	1/1:1,11:12:30.10:581,30,0	0/0:28,0:28:66.44:0,66,1598	0/0:38,0:38:99:0,102,2539	0/0:33,0:33:96.31:0,96,2536	0/0:31,0:31:90.31:0,90,2444	0/0:28,0:28:72.25:0,72,1946	1/1:4,34:38:99:1898,102,0	0/0:24,0:24:72.25:0,72,1947	0/0:24,0:24:66.22:0,66,1709	0/0:15,0:15:39.13:0,39,1003	0/0:40,0:40:99:0,120,3208	0/0:27,0:27:78.22:0,78,2039	0/0:29,0:29:78.27:0,78,2115	0/0:31,0:31:93.32:0,93,2436	0/0:44,0:44:99:0,132,3454	1/1:0,34:34:81.28:1563,81,0	0/0:22,0:22:63.22:0,63,1679	0/0:21,0:21:63.22:0,63,1589	0/0:26,0:26:72.25:0,72,1935	0/0:42,0:42:99:0,123,3220	0/0:19,0:19:54.19:0,54,1452	0/0:20,0:20:57.18:0,57,1442	0/0:32,0:32:93.32:0,93,2497	0/0:26,0:26:78.27:0,78,2081	0/0:33,0:33:99:0,99,2619	0/0:21,0:20:63.22:0,63,1637	0/0:16,0:16:48.16:0,48,1270
chr10	57587829	.	G	GT	857.82	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=4.348;DP=608;FS=1.491;HRun=8;HaplotypeScore=95.7707;InbreedingCoeff=0.8934;MQ=63.58;MQ0=1;MQRankSum=-2.533;QD=20.42;ReadPosRankSum=-2.417;VQSLOD=2.4808;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:60.02:0,60,548	1/1:3,3:6:0.29:121,0,0	0/0:20,0:16:39:0,39,348	0/0:10,0:8:13.51:0,14,99	0/0:41,0:41:98.99:0,99,892	0/0:18,0:18:48:0,48,434	0/0:16,0:16:41.99:0,42,378	1/1:14,10:24:48.58:517,49,0	0/0:9,0:9:23.98:0,24,212	0/0:40,0:40:99:0,108,986	0/0:27,0:27:66.02:0,66,603	0/0:15,0:15:42.02:0,42,387	0/0:21,0:21:57.02:0,57,521	0/0:11,0:11:27.01:0,27,247	0/0:19,0:18:41.96:0,42,369	0/0:29,0:29:78.02:0,78,714	1/1:5,7:12:33.07:350,33,0	0/0:15,0:15:32.92:0,33,291	0/0:24,0:22:47.39:0,47,420	0/0:29,0:29:77.50:0,78,688	0/0:14,0:14:30.01:0,30,274	0/0:18,0:18:45.01:0,45,412	0/0:29,0:29:81.03:0,81,735	0/0:20,0:19:47.98:0,48,432	0/0:26,0:27:71.04:0,71,629	0/0:37,0:37:67.56:0,68,794	0/0:24,0:24:57.49:0,57,522	0/0:24,0:24:48.02:0,48,439
chr10	57587870	.	GT	G	5275.63	PASS	AC=24;AF=0.444;AN=54;BaseQRankSum=5.236;DP=588;FS=3.377;HRun=10;HaplotypeScore=97.3675;InbreedingCoeff=0.9649;MQ=51.39;MQ0=8;MQRankSum=-4.917;QD=18.58;ReadPosRankSum=2.239;VQSLOD=5.3232;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:2,0:27:58.14:0,58,286	0/0:1,0:7:19.57:0,20,95	./.	0/0:11,0:4:6.01:0,6,59	0/0:9,0:37:78.47:0,78,416	0/0:19,0:19:57.15:0,57,630	0/0:17,0:18:50.94:0,51,527	0/0:8,0:23:47.28:0,47,252	1/1:4,11:15:35.98:309,36,0	1/1:10,28:37:76.57:807,77,0	1/1:3,17:20:53.97:464,54,0	0/0:16,0:16:38.80:0,39,463	0/0:24,0:23:48.97:0,49,592	0/0:11,0:11:30.08:0,30,331	1/1:3,22:25:68.99:597,69,0	1/1:18,0:31:9.54:75,10,0	0/0:4,0:11:21.50:0,21,117	0/0:13,1:13:8.93:0,9,307	1/1:8,12:19:32:306,32,0	1/1:7,26:34:45.88:658,46,0	1/1:1,5:6:15:130,15,0	0/0:15,0:15:26.69:0,27,351	0/0:32,2:33:40.96:0,41,869	0/0:16,0:17:41.95:0,42,445	1/1:7,19:26:62.98:546,63,0	1/1:5,20:25:35.78:535,36,0	1/1:11,19:30:68.93:590,69,0	1/1:4,9:13:29.98:259,30,0
chr10	57587873	.	T	TG	429.11	PASS	AB=0.972;AC=8;AF=0.148;AN=54;BaseQRankSum=0.301;DP=593;FS=5.411;HRun=0;HaplotypeScore=119.3160;InbreedingCoeff=0.3894;MQ=50.07;MQ0=10;MQRankSum=0.638;QD=2.96;ReadPosRankSum=0.686;VQSLOD=3.0675;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:27:22.58:113,23,0	1/1:7,0:7:16.63:62,17,0	./.	0/0:13,0:2:6:0,6,65	0/1:39,0:39:62.17:62,0,165	0/0:19,0:19:57.19:0,57,795	0/0:18,0:18:47.17:0,47,648	0/1:28,0:21:77.07:77,0,87	0/0:14,0:14:38.60:0,39,260	0/0:40,0:39:95.29:0,95,711	0/0:22,0:21:56.12:0,56,373	0/0:17,0:17:47.27:0,47,631	0/0:23,0:22:66.15:0,66,831	0/0:11,0:11:33.10:0,33,440	0/0:26,0:25:68.24:0,68,454	0/1:28,4:32:99:238,0,114	0/1:12,0:11:22.35:22,0,65	0/0:15,0:14:30.63:0,31,437	0/0:20,0:19:54.80:0,55,398	0/0:34,0:34:76.16:0,76,624	0/0:6,0:6:17.83:0,18,126	0/0:14,0:13:27.03:0,27,450	0/0:36,0:35:97.45:0,97,1248	0/0:17,0:17:38.94:0,39,564	0/0:26,0:26:77.28:0,77,545	0/0:25,0:25:74.27:0,74,527	0/0:29,0:29:80.17:0,80,560	0/0:13,0:13:38.68:0,39,278
chr10	57587880	.	TG	T	785.07	PASS	AB=0.991;AC=15;AF=0.278;AN=54;BaseQRankSum=10.053;DP=588;FS=0.757;HRun=1;HaplotypeScore=113.5787;InbreedingCoeff=0.1703;MQ=49.56;MQ0=12;MQRankSum=-7.631;QD=2.81;ReadPosRankSum=3.831;VQSLOD=-0.1055;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:37.32:0,37,274	0/0:8,0:8:18.79:0,19,118	./.	0/0:13,0:3:8.96:0,9,81	0/0:36,0:36:56.19:0,56,502	0/0:20,0:20:60.16:0,60,739	0/0:17,0:17:47.99:0,48,560	0/0:30,0:22:12.59:0,13,224	0/1:16,0:16:32.83:45,0,33	0/1:40,0:39:37.81:38,0,101	0/1:23,0:22:4.04:94,0,4	0/0:18,0:18:31.91:0,32,475	0/0:22,0:22:31.30:0,31,594	0/0:10,0:10:30.10:0,30,377	0/1:29,0:28:15.39:112,0,15	0/1:27,0:27:12.62:13,0,116	0/0:8,1:8:7.45:0,7,99	0/0:16,0:15:31.39:0,31,430	0/1:18,0:17:17.23:37,0,17	0/1:36,0:36:80.60:138,0,81	1/1:6,0:6:5.92:32,6,0	0/0:16,0:15:30.88:0,31,378	0/0:35,0:35:84.89:0,85,1071	0/0:17,0:17:45.05:0,45,539	0/1:23,1:24:13.24:106,0,13	0/1:23,1:24:60.92:70,0,61	1/1:24,2:26:33.84:199,34,0	1/1:10,0:10:15.06:69,15,0
chr10	57587893	.	G	GT	4228.21	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=2.019;DP=609;FS=5.243;HRun=11;HaplotypeScore=102.6135;InbreedingCoeff=0.7840;MQ=49.58;MQ0=11;MQRankSum=-5.291;QD=15.15;ReadPosRankSum=-1.257;VQSLOD=4.6629;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,1:31:5.18:0,5,300	0/0:9,0:9:14.91:0,15,116	0/0:15,0:1:2.99:0,3,23	0/0:11,0:2:5.93:0,6,42	0/0:31,1:33:62.67:0,63,487	0/0:26,0:26:47.71:0,48,371	0/0:13,0:13:26.87:0,27,209	0/0:26,0:20:37.82:0,38,277	1/1:4,14:18:35.89:333,36,0	1/1:23,15:38:42.72:561,43,0	1/1:10,11:21:32.83:281,33,0	0/0:21,0:21:44.76:0,45,348	0/0:17,0:18:31.89:0,32,238	0/0:12,0:13:28.90:0,29,215	1/1:7,20:30:45.38:575,45,0	0/0:16,0:27:61.23:0,61,329	0/0:12,0:13:28.93:0,29,214	1/1:16,0:15:40.18:219,40,0	1/1:11,9:19:1.64:240,2,0	1/1:17,20:37:69.03:661,69,0	1/1:4,3:6:2.88:15,3,0	0/0:17,2:18:1.66:0,2,184	0/0:33,0:33:62.66:0,63,484	0/0:21,0:21:41.79:0,42,325	1/1:9,18:28:33.63:484,34,0	1/1:16,9:25:12.81:300,13,0	1/1:16,14:30:16.46:502,16,0	0/1:8,0:8:10.55:58,0,11
chr10	57587896	.	T	TG	697.18	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=4.266;DP=598;FS=8.074;HRun=0;HaplotypeScore=109.2977;InbreedingCoeff=-0.0409;MQ=49.62;MQ0=11;MQRankSum=-6.040;QD=2.67;ReadPosRankSum=7.782;VQSLOD=1.0427;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:68.63:0,69,793	0/0:10,0:10:29.82:0,30,308	0/0:14,0:1:3.01:0,3,41	0/0:11,0:2:6.02:0,6,75	0/0:32,0:32:89.85:0,90,1056	0/0:26,0:26:75.16:0,75,905	0/0:12,0:12:36.09:0,36,455	0/0:27,0:21:55.15:0,55,626	0/1:17,0:17:27.02:44,0,27	0/1:38,0:38:22.52:23,0,394	0/1:19,0:18:23.83:24,0,78	0/0:21,0:21:60.15:0,60,758	0/0:19,0:19:57.08:0,57,650	0/0:13,0:13:39.07:0,39,477	0/1:32,0:32:56.91:57,0,178	0/0:27,0:27:56.71:0,57,223	0/0:11,0:10:30.07:0,30,394	1/1:2,14:15:36.98:508,37,0	0/1:19,0:18:17.73:18,0,171	0/1:37,0:37:64.82:65,0,187	0/0:6,0:5:10.78:0,11,76	0/0:19,0:18:40.58:0,41,500	0/0:29,0:29:80.89:0,81,1029	0/0:21,0:21:54.14:0,54,689	0/1:27,0:27:44.68:45,0,196	0/1:24,0:24:11.87:12,0,284	0/1:32,0:32:56.06:56,0,195	0/0:9,0:9:18.74:0,19,151
chr10	57588306	.	CA	C	579.38	PASS	AB=0.850;AC=12;AF=0.214;AN=56;BaseQRankSum=5.923;DP=689;FS=4.792;HRun=15;HaplotypeScore=89.2964;InbreedingCoeff=0.5532;MQ=74.89;MQ0=3;MQRankSum=0.918;QD=3.15;ReadPosRankSum=3.288;VQSLOD=0.5403;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:31:31.54:0,32,171	1/1:2,8:10:26.48:169,26,0	0/0:39,0:23:22.18:0,22,127	0/0:27,0:18:10.22:0,10,80	0/0:7,0:21:33.79:0,34,265	0/0:24,2:30:5.44:0,5,306	0/0:19,1:20:22.67:0,23,310	1/1:11,15:29:15.30:181,15,0	0/0:22,0:24:31.55:0,32,251	0/0:24,1:29:32.58:0,33,326	0/1:22,6:28:26.10:26,0,284	0/0:26,0:26:68.89:0,69,574	0/0:22,0:22:35.75:0,36,267	0/0:21,0:21:35.82:0,36,285	0/0:21,0:21:50.55:0,51,405	1/1:5,1:22:39.38:145,39,0	1/1:8,11:22:34.69:196,35,0	0/1:16,6:22:16.53:17,0,259	0/1:22,3:23:12.88:13,0,255	0/0:23,0:23:13.66:0,14,242	0/0:20,2:22:6.42:0,6,294	0/0:23,0:23:41.94:0,42,352	0/0:25,0:27:44.80:0,45,371	0/0:21,1:21:22.64:0,23,302	0/0:20,2:22:9.39:0,9,315	0/0:27,0:27:58.17:0,58,487	0/1:23,2:26:2.51:3,0,195	0/0:23,3:27:22.63:0,23,455
chr10	57588821	.	TCTC	T	7562.42	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=13.057;DP=609;FS=3.520;HRun=0;HaplotypeScore=88.3842;InbreedingCoeff=0.9907;MQ=83.97;MQ0=0;MQRankSum=-3.807;QD=34.85;ReadPosRankSum=1.319;VQSLOD=5.4447;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,117,2373	0/0:13,0:13:33.11:0,33,668	0/0:22,0:22:45.15:0,45,888	0/0:18,0:18:42.07:0,42,733	0/0:15,0:15:45.15:0,45,972	0/0:16,0:16:45.15:0,45,958	0/0:28,0:27:78.25:0,78,1593	0/0:17,0:17:45.15:0,45,927	1/1:3,15:18:36.12:563,36,0	1/1:0,11:11:33.11:502,33,0	1/1:1,3:4:9.03:141,9,0	0/0:24,0:24:63.22:0,63,1342	0/0:16,0:16:42.14:0,42,895	0/0:27,0:27:78.25:0,78,1626	1/1:2,30:32:75.26:1173,75,0	0/0:25,0:25:75.26:0,75,1624	0/0:42,0:42:99:0,114,2354	0/0:28,0:28:78.24:0,78,1646	1/1:4,12:16:36.11:541,36,0	1/1:2,13:15:30.10:469,30,0	1/1:5,36:41:81.03:1267,81,0	0/0:14,0:14:30.08:0,30,585	0/0:9,0:9:21.07:0,21,447	0/0:34,0:34:96.30:0,96,1986	1/1:1,18:19:48.16:750,48,0	1/1:7,16:23:48.12:703,48,0	1/1:1,24:25:63.21:985,63,0	1/1:3,10:13:30.10:469,30,0
chr10	57591103	.	CT	C	1543.22	PASS	AB=0.764;AC=27;AF=0.482;AN=56;BaseQRankSum=3.806;DP=584;FS=6.635;HRun=16;HaplotypeScore=66.1961;InbreedingCoeff=0.4750;MQ=57.52;MQ0=5;MQRankSum=2.569;QD=4.47;ReadPosRankSum=3.955;VQSLOD=1.2336;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,3:38:14.30:0,14,395	1/1:4,7:13:24.62:137,25,0	0/0:30,0:11:11.59:0,12,73	0/0:17,0:4:1.55:0,2,4	0/0:25,0:25:32.95:0,33,275	0/0:16,1:19:17.61:0,18,232	0/0:15,0:19:20.49:0,20,244	1/1:16,11:28:6.99:154,7,0	1/1:8,11:22:9.73:150,10,0	1/1:7,12:20:4.55:122,5,0	0/1:9,10:19:0.74:93,0,1	0/1:19,1:21:2.66:3,0,183	0/0:15,0:15:29.39:0,29,210	0/1:17,1:19:10.67:11,0,90	0/1:10,9:19:4.63:87,0,5	1/1:13,0:21:22.06:64,22,0	0/1:14,7:22:20.18:101,0,20	0/0:20,1:21:17.94:0,18,258	0/1:15,9:26:11.81:136,0,12	1/1:11,11:22:0.18:116,0,0	1/1:12,2:18:12.20:63,12,0	0/0:13,2:16:14.77:0,15,217	0/0:16,0:16:23.74:0,24,179	0/0:23,0:23:34.76:0,35,387	1/1:7,11:20:24.52:137,25,0	1/1:15,7:21:19.38:113,19,0	0/1:14,13:27:10.34:158,0,10	1/1:1,5:6:14.68:90,15,0
chr10	57591328	.	GT	G	2244.43	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.312;DP=782;FS=3.059;HRun=1;HaplotypeScore=72.9451;InbreedingCoeff=0.9986;MQ=75.09;MQ0=0;MQRankSum=-3.740;QD=36.79;ReadPosRankSum=0.163;VQSLOD=3.9617;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,48:48:99:1886,135,0	0/0:9,0:9:27.09:0,27,432	0/0:20,0:20:57.19:0,57,902	0/0:42,0:42:99:0,118,1828	1/1:0,13:13:36.08:480,36,0	0/0:22,0:22:63.21:0,63,1007	0/0:48,0:48:99:0,141,2194	0/0:32,0:32:96.33:0,96,1527	0/0:26,0:26:78.25:0,78,1223	0/0:26,0:26:75.25:0,75,1177	0/0:11,0:11:33.11:0,33,525	0/0:43,0:43:99:0,126,1970	0/0:28,0:28:84.26:0,84,1308	0/0:36,0:36:99:0,105,1670	0/0:32,0:32:96.33:0,96,1535	0/0:28,0:28:84.26:0,84,1293	0/0:32,0:32:93.28:0,93,1452	0/0:27,0:27:78.24:0,78,1216	0/0:20,0:20:60.20:0,60,960	0/0:20,0:20:60.20:0,60,959	0/0:82,0:82:99:0,244,3845	0/0:12,0:12:36.12:0,36,575	0/0:16,0:16:48.15:0,48,740	0/0:40,0:40:99:0,120,1918	0/0:11,0:11:33.11:0,33,528	0/0:20,0:20:60.18:0,60,907	0/0:29,0:29:87.28:0,87,1364	0/0:9,0:9:27.09:0,27,432
chr10	57592151	.	A	AT	730.30	PASS	AB=0.912;AC=13;AF=0.232;AN=56;BaseQRankSum=1.477;DP=486;FS=25.826;HRun=11;HaplotypeScore=58.5751;InbreedingCoeff=0.2733;MQ=76.12;MQ0=0;MQRankSum=0.909;QD=3.76;ReadPosRankSum=-0.739;VQSLOD=-0.5576;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,21:27:25.76:435,26,0	0/0:6,0:6:11.90:0,12,89	0/0:11,0:11:10.67:0,11,93	0/0:13,0:13:10.23:0,10,52	1/1:11,11:22:17.77:230,18,0	0/1:17,1:19:50.87:51,0,107	0/1:8,6:14:9.54:10,0,118	0/1:29,0:30:3.24:3,0,259	0/0:14,0:14:17.82:0,18,139	0/0:25,3:29:34.26:0,34,440	0/0:8,0:8:14.90:0,15,116	0/1:17,0:17:7.04:7,0,232	0/0:17,0:17:17.79:0,18,139	0/0:19,0:19:32.74:0,33,255	0/0:15,0:15:4.27:0,4,183	1/1:1,0:18:20:105,20,0	0/0:15,0:15:29.82:0,30,232	0/0:17,0:18:9.28:0,9,209	0/1:11,0:11:28.45:28,0,95	0/1:12,7:19:11.17:11,0,214	0/1:17,0:17:12.80:13,0,196	0/0:13,0:13:2.11:0,2,138	0/0:14,0:14:34.89:0,35,262	0/0:17,0:17:38.78:0,39,300	0/0:18,0:18:35.78:0,36,276	0/0:28,0:28:44.66:0,45,348	0/0:20,0:20:35.24:0,35,265	0/0:15,0:15:23.82:0,24,186
chr10	57592599	.	CT	C	1228.53	PASS	AB=0.854;AC=10;AF=0.179;AN=56;BaseQRankSum=4.506;DP=482;FS=5.140;HRun=12;HaplotypeScore=58.2694;InbreedingCoeff=0.6610;MQ=64.35;MQ0=6;MQRankSum=0.776;QD=9.60;ReadPosRankSum=-0.419;VQSLOD=2.5255;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,2:35:57.39:0,57,704	1/1:1,4:5:8.96:70,9,0	0/0:23,0:14:10.36:0,10,105	0/0:15,0:10:5.59:0,6,34	0/0:11,1:14:9.56:0,10,251	0/0:22,0:23:28.01:0,28,445	0/0:16,2:18:18.73:0,19,332	1/1:10,17:28:46.74:346,47,0	0/0:15,1:16:21.83:0,22,391	0/0:13,1:14:12.42:0,12,283	0/0:9,0:9:18.04:0,18,183	0/0:14,0:14:30.01:0,30,290	0/0:8,0:8:21.03:0,21,206	0/1:14,3:17:30.60:31,0,254	0/0:21,0:20:24.83:0,25,422	1/1:2,15:17:14.43:294,14,0	1/1:3,34:37:80.67:626,81,0	0/0:15,0:16:42.39:0,42,407	0/1:20,3:23:25.40:25,0,338	0/0:15,0:15:33.06:0,33,329	0/0:13,1:13:12.83:0,13,312	0/0:3,0:3:6.01:0,6,61	0/0:10,0:12:29.75:0,30,266	0/0:16,1:17:17.94:0,18,326	0/0:12,0:12:27.04:0,27,266	0/0:23,0:23:35.52:0,36,424	0/0:19,0:18:48.03:0,48,464	0/0:12,0:13:28.90:0,29,297
chr10	57592752	.	G	GGAACCTATAACC	4839.46	PASS	AB=0.965;AC=22;AF=0.393;AN=56;BaseQRankSum=7.743;DP=514;FS=124.768;HRun=0;HaplotypeScore=223.6350;InbreedingCoeff=-0.5832;MQ=31.85;MQ0=36;MQRankSum=-5.722;QD=13.37;ReadPosRankSum=-1.697;VQSLOD=-0.6998;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:13:2.99:0,3,113	0/1:10,0:10:64.28:64,0,233	0/0:27,0:8:24.08:0,24,760	0/0:37,0:11:27.09:0,27,1010	1/1:17,0:17:0.33:25,0,0	0/1:20,1:21:99:526,0,103	0/1:25,1:27:99:553,0,762	0/1:21,0:17:60.02:60,0,1277	0/1:15,0:14:35.71:36,0,520	0/1:18,0:16:18.93:19,0,1360	0/1:16,0:15:44.71:45,0,155	0/1:25,0:24:99:344,0,1048	0/1:15,3:17:99:959,0,669	0/1:12,1:14:99:190,0,406	0/1:18,0:16:99:232,0,308	0/0:15,0:15:3.46:0,3,518	0/0:24,0:23:48.70:0,49,1457	0/0:13,0:13:29.62:0,30,1040	0/1:10,0:7:99:134,0,483	0/1:14,0:13:77.02:77,0,96	0/0:21,0:19:8.67:0,9,353	0/1:14,2:18:99:759,0,531	0/1:13,0:13:99:147,0,111	0/1:23,0:22:53.07:53,0,381	0/1:15,0:14:77.55:78,0,267	0/1:15,0:14:99:179,0,979	0/1:18,0:17:99:268,0,855	0/1:13,0:12:93.39:93,0,916
chr10	57606117	.	GTC	G	760.69	PASS	AB=0.981;AC=29;AF=0.604;AN=48;BaseQRankSum=-3.391;DP=419;FS=0.000;HRun=0;HaplotypeScore=106.5241;InbreedingCoeff=-0.2916;MQ=42.80;MQ0=34;MQRankSum=-0.665;QD=2.09;ReadPosRankSum=-5.172;VQSLOD=0.3850;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:13,0:8:0:1,0,0	1/1:3,0:2:2.94:18,3,0	./.	0/1:25,0:9:2.48:2,0,12	./.	0/1:7,0:6:9.83:10,0,21	0/1:21,1:18:63.09:78,0,63	0/1:12,2:5:8.30:69,0,8	0/1:19,0:15:8.60:9,0,14	1/1:15,0:12:19.87:143,20,0	1/1:7,0:5:0.89:2,1,0	0/1:17,0:12:32.11:32,0,51	0/1:15,0:13:48.83:49,0,49	0/1:11,0:11:19.54:35,0,20	0/1:20,3:16:26.99:27,0,35	0/1:8,0:7:32.80:33,0,33	0/1:14,0:9:9.99:10,0,41	0/1:16,0:13:42.95:94,0,43	1/1:10,0:7:4.22:25,4,0	./.	0/1:49,0:32:34.32:34,0,60	0/0:12,0:10:6.86:0,7,48	0/0:8,0:5:5.96:0,6,43	0/1:42,0:32:39.84:40,0,53	1/1:4,0:3:3:26,3,0	1/1:16,0:7:9.96:63,10,0	1/1:14,0:11:15.12:101,15,0	./.
chr10	57606137	.	AGGCC	A	310.99	PASS	AB=0.892;AC=13;AF=0.241;AN=54;BaseQRankSum=5.482;DP=489;FS=1.831;HRun=0;HaplotypeScore=124.0855;InbreedingCoeff=-0.2069;MQ=45.59;MQ0=41;MQRankSum=-3.803;QD=1.53;ReadPosRankSum=0.453;VQSLOD=2.3478;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:16,3:13:50:50,0,289	1/1:3,2:2:5.34:22,5,0	0/0:20,0:4:6.71:0,7,105	0/1:28,0:10:37.08:37,0,134	./.	0/0:6,0:5:9.02:0,9,201	0/1:25,8:30:53.76:54,0,1251	0/0:15,3:8:24.08:0,24,607	0/0:17,2:14:11.71:0,12,654	0/0:16,1:14:33.11:0,33,950	0/0:9,0:6:6.02:0,6,174	0/1:13,4:15:92.34:92,0,355	0/1:12,1:12:27.61:28,0,547	0/1:10,1:10:24.21:24,0,203	0/0:26,2:19:32.79:0,33,681	0/1:5,2:7:37.79:38,0,92	0/1:19,1:14:29.20:29,0,713	0/1:18,1:15:19.79:20,0,777	0/1:5,1:2:56.59:57,0,81	0/0:6,0:3:3.01:0,3,87	0/0:67,1:38:50.68:0,51,1235	0/0:7,0:7:8.65:0,9,204	0/0:8,1:7:9.03:0,9,235	0/0:35,5:30:16.09:0,16,576	0/0:7,1:5:15.05:0,15,400	0/1:23,0:8:8.36:8,0,555	0/0:25,0:17:23.84:0,24,825	0/0:2,0:1:3.01:0,3,87
chr10	57606252	.	CCT	C	1063.59	PASS	AB=0.967;AC=15;AF=0.278;AN=54;BaseQRankSum=-1.409;DP=731;FS=4.481;HRun=0;HaplotypeScore=121.8961;InbreedingCoeff=-0.2321;MQ=36.16;MQ0=115;MQRankSum=-1.522;QD=2.47;ReadPosRankSum=-1.266;VQSLOD=1.7334;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:18:24.64:0,25,169	1/1:4,0:4:3:25,3,0	0/0:30,0:3:5.78:0,6,35	0/0:39,0:5:5.78:0,6,31	0/0:17,0:13:18:0,18,188	0/0:15,0:11:16.13:0,16,125	0/0:29,0:22:47.50:0,48,505	0/1:33,18:27:99:319,0,102	0/1:34,1:25:51.49:127,0,51	0/1:28,0:17:99:115,0,161	0/1:12,0:8:14.98:15,0,36	0/0:20,0:13:17.96:0,18,233	0/0:11,0:10:20.61:0,21,126	0/0:18,0:18:15.65:0,16,157	0/1:25,1:18:8.45:78,0,8	./.	0/1:17,1:14:45.71:105,0,46	0/0:25,0:21:32.20:0,32,313	0/1:27,0:10:45.89:46,0,84	0/1:15,0:11:35.71:36,0,45	0/1:124,1:99:99:254,0,552	0/0:20,0:13:11.97:0,12,115	0/0:13,0:9:14.96:0,15,163	0/0:41,0:35:31.90:0,32,491	0/1:19,0:13:4.01:4,0,90	0/1:36,0:22:11.20:11,0,252	0/1:19,1:15:57.47:72,0,57	0/1:14,0:7:7.02:7,0,112
chr10	57606319	.	CTG	C	261.64	PASS	AB=0.994;AC=7;AF=0.135;AN=52;BaseQRankSum=1.672;DP=878;FS=4.650;HRun=0;HaplotypeScore=193.7798;InbreedingCoeff=0.0542;MQ=36.07;MQ0=109;MQRankSum=-2.086;QD=1.20;ReadPosRankSum=1.102;VQSLOD=2.6509;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:43:28.45:0,28,308	0/0:7,0:3:2.60:0,3,10	./.	./.	0/1:22,0:18:14.01:14,0,162	0/1:20,0:18:8.99:9,0,110	0/0:69,0:61:33.69:0,34,565	0/0:53,0:28:7.92:0,8,39	0/0:28,0:18:5.44:0,5,45	0/0:25,0:17:21:0,21,205	0/0:18,0:13:7.80:0,8,55	0/0:29,0:26:9.46:0,9,97	0/0:27,0:20:9.22:0,9,197	0/0:19,0:15:8.99:0,9,93	0/1:43,0:35:4.84:5,0,41	0/0:12,0:10:3.01:0,3,44	0/1:33,0:25:3.47:3,0,31	1/1:24,5:22:29.44:311,29,0	0/0:21,0:7:2.46:0,2,25	0/0:18,0:11:1.49:0,1,35	0/0:137,0:98:32.69:0,33,331	0/0:11,0:8:3.01:0,3,31	0/0:12,0:9:9.08:0,9,97	0/1:68,2:62:38.85:39,0,303	0/0:18,0:15:21.50:0,21,233	0/0:28,0:18:12.31:0,12,83	0/0:17,0:15:8.39:0,8,99	0/0:6,0:5:8.97:0,9,70
chr10	57606391	.	C	CTG	5501.07	PASS	AB=0.725;AC=19;AF=0.339;AN=56;BaseQRankSum=-3.794;DP=642;FS=10.194;HRun=0;HaplotypeScore=131.8781;InbreedingCoeff=0.7112;MQ=45.23;MQ0=36;MQRankSum=-0.923;QD=19.23;ReadPosRankSum=2.391;VQSLOD=4.7863;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:32:42.54:0,43,505	0/0:7,0:5:15.05:0,15,185	0/0:23,0:15:12.02:0,12,127	0/0:32,0:15:26.52:0,27,242	0/0:6,0:6:12.04:0,12,148	0/0:13,0:12:27.08:0,27,332	0/0:29,0:24:42.09:0,42,499	0/0:29,0:26:1.68:0,2,435	0/1:15,7:19:9.33:364,0,9	1/1:20,16:29:49.02:757,49,0	1/1:9,6:12:15.05:244,15,0	0/0:22,0:21:33.10:0,33,404	0/0:18,0:17:20.96:0,21,357	0/0:15,0:13:21.01:0,21,229	1/1:22,13:28:11:695,11,0	0/0:13,0:11:24.07:0,24,293	0/0:24,0:20:4.99:0,5,305	0/0:20,0:18:29.79:0,30,330	0/1:14,7:18:12.90:290,0,13	1/1:9,6:12:21.07:338,21,0	1/1:45,22:49:24.38:884,24,0	0/0:19,0:18:39.12:0,39,480	0/0:14,0:13:24.06:0,24,281	0/0:33,0:31:29.84:0,30,353	1/1:9,10:18:32.64:537,33,0	1/1:13,13:21:45.15:715,45,0	0/1:10,10:16:10.25:361,0,10	1/1:4,6:9:20.84:315,21,0
chr10	57609178	.	T	TGGGA	15400.46	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=16.596;DP=516;FS=0.702;HRun=0;HaplotypeScore=163.1593;InbreedingCoeff=0.9437;MQ=66.00;MQ0=0;MQRankSum=-16.674;QD=54.23;ReadPosRankSum=-1.806;VQSLOD=5.4748;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,22:30:66:1435,66,0	1/1:2,4:6:15.05:328,15,0	0/0:12,0:12:13.53:0,14,426	0/0:7,0:7:5.74:0,6,211	1/1:4,9:13:14.42:342,14,0	0/0:20,0:20:60.21:0,60,1183	0/0:32,0:32:90.31:0,90,1751	1/1:7,5:12:36.12:857,36,0	1/1:2,13:15:45.11:990,45,0	1/1:2,14:17:51.17:1139,51,0	1/1:4,3:7:2.25:85,2,0	0/0:30,0:30:87.30:0,87,1706	0/0:21,0:21:63.22:0,63,1242	0/0:31,0:31:93.28:0,93,1791	1/1:9,11:20:51.10:1115,51,0	1/1:0,14:14:42.14:954,42,0	1/1:6,11:17:39.13:778,39,0	1/1:8,12:19:51.18:1205,51,0	1/1:6,5:11:33.10:741,33,0	1/1:1,8:9:24.08:496,24,0	1/1:13,10:23:35.33:644,35,0	0/0:27,0:27:75.24:0,75,1445	0/0:18,0:18:48.14:0,48,922	0/0:34,0:34:96.33:0,96,1902	1/1:2,12:14:42.14:901,42,0	1/1:8,17:25:75.22:1681,75,0	1/1:7,18:26:66.18:1404,66,0	1/1:2,3:5:15.05:304,15,0
chr10	57609182	.	TC	T	4495.76	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=17.070;DP=470;FS=2.510;HRun=3;HaplotypeScore=141.5663;InbreedingCoeff=0.9577;MQ=72.15;MQ0=0;MQRankSum=-16.125;QD=19.89;ReadPosRankSum=0.621;VQSLOD=4.3288;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,22:25:60.78:467,61,0	1/1:0,4:5:14.52:99,15,0	0/0:13,0:13:32.25:0,32,378	0/0:9,0:9:11.54:0,12,275	1/1:4,9:13:19.33:149,19,0	0/0:20,0:20:60.20:0,60,864	0/0:33,0:33:99:0,99,1386	1/1:1,5:6:17.97:151,18,0	1/1:1,13:14:41.86:329,42,0	1/1:1,15:17:49.82:436,50,0	1/1:2,3:5:4.50:23,4,0	0/0:35,0:35:99:0,99,1405	0/0:23,0:23:69.22:0,69,975	0/0:32,0:32:93.31:0,93,1338	1/1:4,11:15:43.89:341,44,0	1/1:2,14:16:47.82:371,48,0	1/1:1,11:12:25.48:192,25,0	1/1:0,12:12:35.03:298,35,0	1/1:0,5:5:15:131,15,0	1/1:1,8:9:22.40:153,22,0	1/1:0,13:13:20.96:195,21,0	0/0:25,0:25:72.24:0,72,1035	0/0:17,0:17:45.15:0,45,647	0/0:37,0:37:99:0,102,1463	1/1:1,12:13:35.82:268,36,0	1/1:4,17:21:50.92:425,51,0	1/1:1,18:21:54.54:397,55,0	1/1:0,3:3:8.98:72,9,0
chr10	57609579	.	GT	G	591.40	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.526;DP=685;FS=6.280;HRun=9;HaplotypeScore=69.9602;InbreedingCoeff=0.9943;MQ=74.20;MQ0=0;MQRankSum=-2.666;QD=22.75;ReadPosRankSum=1.737;VQSLOD=4.6459;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,102,1175	0/0:12,0:12:33.09:0,33,371	0/0:31,1:27:35.47:0,35,565	0/0:18,0:18:41.21:0,41,396	0/0:19,0:19:51.14:0,51,580	0/0:23,0:23:57.17:0,57,658	0/0:22,0:22:57.15:0,57,645	0/0:30,0:30:72.21:0,72,831	0/0:18,0:18:51.12:0,51,569	0/0:36,0:37:99:0,105,1183	0/0:9,0:9:24.07:0,24,277	0/0:42,0:42:99:0,105,1211	0/0:20,0:20:57.17:0,57,658	0/0:25,0:25:60.16:0,60,682	0/0:20,0:20:51.14:0,51,580	1/1:0,26:26:75.04:686,75,0	0/0:30,0:31:81.07:0,81,914	0/0:28,0:27:78.19:0,78,885	0/0:27,0:27:72.19:0,72,811	0/0:17,0:17:48.13:0,48,544	0/0:27,0:28:69.04:0,69,775	0/0:16,0:16:42.12:0,42,484	0/0:20,0:21:56.99:0,57,629	0/0:31,0:31:78.23:0,78,895	0/0:17,1:19:26.35:0,26,490	0/0:33,0:33:90.25:0,90,1022	0/0:32,0:32:93.26:0,93,1063	0/0:11,0:11:24.07:0,24,277
chr10	57611958	.	CG	C	4155.80	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=10.903;DP=804;FS=0.809;HRun=1;HaplotypeScore=77.3724;InbreedingCoeff=0.9999;MQ=86.80;MQ0=0;MQRankSum=-0.989;QD=38.13;ReadPosRankSum=-0.460;VQSLOD=3.8759;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,138,2159	1/1:0,10:10:30.10:420,30,0	0/0:29,0:29:78.27:0,78,1246	0/0:25,0:25:69.09:0,69,993	0/0:21,0:21:63.15:0,63,972	0/0:21,0:21:60.18:0,60,909	0/0:22,0:22:66.22:0,66,1047	1/1:0,36:36:99:1429,105,0	0/0:23,0:23:66.23:0,66,1053	0/0:40,0:40:99:0,117,1814	0/0:28,0:28:84.25:0,84,1314	0/0:27,0:27:81.26:0,81,1271	0/0:35,0:35:99:0,105,1614	0/0:35,0:35:99:0,102,1520	0/0:39,0:39:99:0,114,1752	1/1:0,23:23:57.19:797,57,0	1/1:0,40:40:99:1510,108,0	0/0:24,0:23:72.21:0,72,1090	0/0:21,0:21:63.20:0,63,957	0/0:18,0:18:54.18:0,54,861	0/0:53,0:53:99:0,153,2332	0/0:18,0:18:54.18:0,54,859	0/0:18,0:18:51.12:0,51,764	0/0:44,0:44:99:0,132,2023	0/0:21,0:21:60.18:0,60,934	0/0:27,0:27:78.27:0,78,1245	0/0:33,0:33:96.33:0,96,1530	0/0:26,0:26:78.27:0,78,1244
chr10	57612520	.	C	CT	366.28	PASS	AB=0.971;AC=7;AF=0.125;AN=56;BaseQRankSum=0.537;DP=605;FS=1.370;HRun=11;HaplotypeScore=71.5513;InbreedingCoeff=0.5832;MQ=64.50;MQ0=1;MQRankSum=-0.395;QD=3.66;ReadPosRankSum=-0.771;VQSLOD=0.1881;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,2:42:20.40:0,20,519	0/0:7,0:7:14.79:0,15,115	0/1:14,0:6:6.10:6,0,9	0/1:15,0:11:4.07:4,0,82	0/0:15,0:16:36.14:0,36,263	0/0:14,0:14:32.85:0,33,255	0/0:28,0:28:62.06:0,62,472	0/0:30,0:30:50.56:0,51,393	0/0:16,0:17:34.55:0,35,245	0/0:19,0:19:18.07:0,18,293	0/0:19,0:20:49.69:0,50,368	0/0:21,0:21:51.67:0,52,397	0/0:19,0:19:22.36:0,22,327	0/0:17,0:17:35.44:0,35,256	0/0:20,0:20:53.76:0,54,412	1/1:13,0:13:30.92:150,31,0	0/0:27,1:30:29.31:0,29,456	1/1:7,19:26:33.52:329,34,0	0/0:28,0:28:41.74:0,42,324	0/0:27,0:29:61.68:0,62,453	0/0:18,0:18:35.80:0,36,278	0/0:20,0:20:47.81:0,48,371	0/0:24,1:25:29.09:0,29,394	0/1:29,3:32:10.94:11,0,461	0/0:17,0:17:38.84:0,39,301	0/0:24,0:24:61.30:0,61,468	0/0:33,0:33:52.85:0,53,569	0/0:11,0:11:26.46:0,26,188
chr10	57612530	.	T	TC	286.61	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=8.173;DP=604;FS=2.387;HRun=0;HaplotypeScore=66.8219;InbreedingCoeff=0.5303;MQ=61.09;MQ0=3;MQRankSum=2.216;QD=7.54;ReadPosRankSum=2.887;VQSLOD=3.4734;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,102,1262	0/0:7,0:7:18.02:0,18,228	0/0:10,0:2:5.97:0,6,59	0/0:13,0:9:1.90:0,2,153	0/0:15,0:15:41.94:0,42,515	0/0:15,0:14:39.04:0,39,497	0/0:28,0:28:80.97:0,81,967	0/0:30,0:29:86.90:0,87,958	0/0:14,0:14:38.99:0,39,478	0/0:18,0:18:47.26:0,47,612	0/0:19,0:19:54.07:0,54,705	0/0:20,0:20:51:0,51,739	0/0:20,0:20:52.55:0,53,709	0/0:15,0:15:41.98:0,42,502	0/0:22,0:22:66.18:0,66,847	1/1:1,13:14:30.97:377,31,0	0/0:31,0:31:84.57:0,85,1038	0/1:24,0:24:13.55:14,0,52	0/0:22,0:21:63.08:0,63,741	0/0:32,0:32:80.87:0,81,956	0/0:17,0:17:47.93:0,48,567	0/0:24,0:24:66.11:0,66,814	0/0:26,0:26:72.14:0,72,901	0/0:36,0:36:82.88:0,83,1113	0/0:15,0:15:39.13:0,39,542	0/0:28,0:28:84.19:0,84,1029	0/0:32,0:32:87.06:0,87,1119	0/0:14,0:13:39.04:0,39,452
chr10	57613697	.	AGACT	A	2980.33	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.383;DP=761;FS=1.675;HRun=0;HaplotypeScore=125.0889;InbreedingCoeff=0.9999;MQ=89.21;MQ0=0;MQRankSum=-4.751;QD=43.19;ReadPosRankSum=-0.945;VQSLOD=3.4727;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:87.30:0,87,2310	1/1:0,14:14:36.12:683,36,0	0/0:33,0:33:87.28:0,87,2132	0/0:27,0:27:70.29:0,70,1664	0/0:26,0:26:75.26:0,75,1988	0/0:36,0:36:99:0,105,2772	0/0:16,0:16:48.16:0,48,1287	1/1:6,31:37:93.28:1642,93,0	0/0:26,0:26:78.27:0,78,2101	0/0:26,0:26:78.26:0,78,1987	0/0:22,0:22:63.22:0,63,1682	0/0:33,0:33:96.33:0,96,2573	0/0:31,0:31:93.31:0,93,2444	0/0:34,0:34:99:0,99,2499	0/0:33,0:33:93.32:0,93,2501	0/0:32,0:32:96.32:0,96,2521	1/1:2,16:18:42.14:797,42,0	0/0:20,0:20:60.21:0,60,1581	0/0:22,0:21:60.18:0,60,1516	0/0:25,0:25:75.26:0,75,1996	0/0:40,0:40:99:0,117,3004	0/0:22,0:22:66.21:0,66,1724	0/0:26,0:26:72.25:0,72,1897	0/0:27,0:27:72.25:0,72,1907	0/0:17,0:17:48.15:0,48,1233	0/0:39,0:39:99:0,114,3010	0/0:28,0:28:78.27:0,78,2105	0/0:21,0:21:63.22:0,63,1701
chr10	57614037	.	T	TTC	972.84	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-7.434;DP=689;FS=3.121;HRun=0;HaplotypeScore=77.2518;InbreedingCoeff=0.9996;MQ=75.38;MQ0=0;MQRankSum=-3.017;QD=40.53;ReadPosRankSum=1.171;VQSLOD=5.5920;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,117,1723	0/0:14,0:14:36.11:0,36,511	0/0:30,0:28:78.23:0,78,1114	0/0:22,0:21:60.17:0,60,848	0/0:26,0:26:78.26:0,78,1146	0/0:22,0:22:66.18:0,66,930	0/0:27,0:27:75.25:0,75,1104	0/0:19,0:19:48.16:0,48,707	0/0:27,0:27:81.26:0,81,1173	0/0:30,0:30:90.30:0,90,1326	0/0:17,0:17:45.15:0,45,663	0/0:20,0:20:54.17:0,54,775	0/0:22,0:22:60.20:0,60,883	0/0:19,0:19:54.18:0,54,793	0/0:27,0:27:75.25:0,75,1105	1/1:1,23:24:57.20:1068,57,0	0/0:34,0:34:99:0,102,1458	0/0:24,0:24:72.23:0,72,1040	0/0:22,0:22:66.22:0,66,971	0/0:26,0:26:78.26:0,78,1147	0/0:59,0:59:99:0,166,2410	0/0:20,0:20:60.20:0,60,883	0/0:13,0:13:39.13:0,39,574	0/0:25,0:25:72.22:0,72,1038	0/0:17,0:17:48.16:0,48,707	0/0:35,0:35:99:0,105,1519	0/0:14,0:14:36.12:0,36,530	0/0:14,0:14:42.14:0,42,619
chr10	57615153	.	TAAAC	T	7261.59	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=9.144;DP=450;FS=0.000;HRun=0;HaplotypeScore=76.7382;InbreedingCoeff=0.9268;MQ=51.53;MQ0=9;MQRankSum=-1.918;QD=22.84;ReadPosRankSum=1.263;VQSLOD=4.2769;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,11:19:24.01:362,24,0	1/1:0,0:7:15.02:140,15,0	0/0:21,0:4:6:0,6,96	0/0:18,0:12:18.05:0,18,349	1/1:2,18:20:48.08:754,48,0	0/0:12,0:11:21.06:0,21,462	0/0:8,0:8:12.04:0,12,285	1/1:2,0:16:20.95:180,21,0	1/1:4,4:8:8.96:116,9,0	1/1:9,12:21:36.12:586,36,0	1/1:7,11:18:29.76:362,30,0	0/0:12,0:11:24.08:0,24,585	0/0:10,0:10:9.03:0,9,219	0/0:9,0:9:12.04:0,12,282	1/1:4,10:14:27.02:411,27,0	1/1:10,0:20:21.02:192,21,0	1/1:7,0:15:12.01:112,12,0	1/1:7,14:21:30.10:491,30,0	1/1:17,4:20:21.01:289,21,0	1/1:8,12:20:32.98:478,33,0	1/1:8,8:15:21.07:344,21,0	0/0:21,0:21:42.12:0,42,900	0/0:12,0:12:18.06:0,18,403	0/0:9,0:8:5.98:0,6,93	1/1:6,22:27:57.13:902,57,0	1/1:9,11:19:30.10:491,30,0	1/1:6,20:26:48.11:756,48,0	1/1:1,7:7:18.06:295,18,0
chr10	57615329	.	C	CG	623.29	PASS	AB=0.810;AC=12;AF=0.214;AN=56;BaseQRankSum=2.041;DP=292;FS=1.054;HRun=0;HaplotypeScore=67.4700;InbreedingCoeff=-0.2813;MQ=83.30;MQ0=0;MQRankSum=-5.886;QD=5.03;ReadPosRankSum=1.377;VQSLOD=3.2060;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:24.08:0,24,335	0/0:4,0:4:6.02:0,6,82	0/0:19,0:18:57.17:0,57,766	0/0:15,0:15:45.13:0,45,590	0/1:10,2:12:14.53:15,0,308	0/1:8,4:12:99:151,0,199	0/0:16,0:16:39.09:0,39,522	0/0:12,0:12:33.11:0,33,461	0/0:16,0:16:48.16:0,48,671	0/0:13,0:13:39.13:0,39,542	0/1:5,5:10:99:129,0,183	0/0:12,0:12:33.11:0,33,461	0/1:6,2:8:53.89:54,0,188	0/0:6,0:6:15.05:0,15,210	0/1:6,1:7:28.05:28,0,192	0/0:4,0:4:9.03:0,9,119	0/0:3,0:3:3.01:0,3,42	0/0:10,0:9:24.08:0,24,336	0/1:12,1:13:11.07:11,0,425	0/1:7,3:10:53.02:53,0,190	0/0:8,0:8:6.02:0,6,84	0/1:8,2:10:52.44:52,0,227	0/1:4,4:8:99:145,0,144	0/0:10,0:10:24.08:0,24,335	0/1:5,1:6:30.98:31,0,153	0/0:9,0:9:21.07:0,21,294	0/1:17,1:18:0.13:0,0,523	0/1:7,3:10:98.13:98,0,169
chr10	57615381	.	CTGTCTT	C	713.29	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=4.006;DP=447;FS=3.607;HRun=0;HaplotypeScore=123.8624;InbreedingCoeff=0.9292;MQ=54.84;MQ0=2;MQRankSum=-2.975;QD=25.47;ReadPosRankSum=-3.537;VQSLOD=2.9464;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:18:29.69:0,30,938	1/1:0,4:4:6.02:147,6,0	0/0:34,0:13:28.43:0,28,581	0/0:32,0:21:41.57:0,42,729	0/0:15,0:15:22.74:0,23,852	0/0:19,0:19:54.13:0,54,1339	0/0:22,0:22:66.04:0,66,1521	1/1:4,11:15:23.93:452,24,0	0/0:19,0:19:54.14:0,54,1356	0/0:18,0:18:54.12:0,54,1578	0/0:8,0:8:17.98:0,18,389	0/0:18,0:18:53.85:0,54,1619	0/0:14,0:14:39.13:0,39,969	0/0:9,0:9:27.09:0,27,655	0/0:17,0:17:39:0,39,932	0/0:10,0:10:27.05:0,27,505	1/1:4,5:9:12.04:245,12,0	0/0:17,0:16:45.15:0,45,1505	0/0:11,0:9:21.07:0,21,635	0/0:13,0:13:39.13:0,39,1155	0/0:18,0:17:42.01:0,42,1213	0/0:9,0:9:23.67:0,24,538	0/0:7,0:7:20.96:0,21,592	0/0:33,0:32:82.72:0,83,2609	0/0:10,0:10:30.10:0,30,765	0/0:13,0:13:39.13:0,39,1172	0/0:27,0:27:80.89:0,81,2232	0/0:4,0:4:12.04:0,12,380
chr10	57615387	.	T	TTC	909.68	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=0.709;DP=464;FS=4.253;HRun=0;HaplotypeScore=102.4088;InbreedingCoeff=0.8795;MQ=55.12;MQ0=3;MQRankSum=-0.347;QD=14.21;ReadPosRankSum=0.025;VQSLOD=3.1354;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,10:18:27.09:415,27,0	1/1:4,0:4:5.74:30,6,0	0/0:37,0:15:11.91:0,12,146	0/0:38,0:21:9.19:0,9,49	1/1:10,5:15:24.08:352,24,0	0/0:21,0:21:41.53:0,42,442	0/0:18,0:18:45:0,45,478	1/1:13,3:15:18.01:191,18,0	0/0:19,0:19:30.05:0,30,347	0/0:16,0:16:42.13:0,42,504	0/0:9,0:9:14.83:0,15,127	0/0:19,0:19:44.62:0,45,486	0/0:16,0:16:37.35:0,37,428	0/0:10,0:10:18.05:0,18,218	0/0:18,0:18:29.95:0,30,297	0/0:12,0:12:3.66:0,4,188	1/1:5,4:9:11.27:85,11,0	0/0:17,0:16:36.08:0,36,422	0/0:12,0:9:15.05:0,15,182	0/0:13,0:13:27.08:0,27,325	0/0:19,0:18:41.95:0,42,435	0/0:10,0:10:14.58:0,15,125	0/0:8,0:8:17.94:0,18,189	0/0:34,0:33:47.53:0,48,831	0/0:9,0:10:20.90:0,21,232	0/0:13,0:13:30.09:0,30,364	0/0:27,0:27:59.75:0,60,665	0/0:4,0:4:9.03:0,9,109
chr10	57615427	.	TACACAC	T	3123.66	PASS	AC=22;AF=0.407;AN=54;BaseQRankSum=6.782;DP=479;FS=54.209;HRun=0;HaplotypeScore=118.5794;InbreedingCoeff=0.8683;MQ=52.66;MQ0=6;MQRankSum=-6.393;QD=22.00;ReadPosRankSum=2.333;VQSLOD=0.7406;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:23:17.99:0,18,339	./.	0/0:29,0:10:12.51:0,13,398	0/0:38,0:15:18.42:0,18,386	0/0:10,0:12:17.89:0,18,395	0/0:16,0:18:35.49:0,35,1096	0/0:19,0:20:30.02:0,30,820	0/0:34,0:30:66.18:0,66,1253	1/1:1,14:15:27.09:575,27,0	1/1:9,3:12:6.01:90,6,0	1/1:3,7:10:9.03:192,9,0	0/0:15,0:15:26.30:0,26,699	0/0:21,0:21:48.10:0,48,1457	0/0:9,0:11:27.09:0,27,769	1/1:4,15:19:24.08:510,24,0	0/0:7,0:15:14.94:0,15,386	0/0:13,0:13:11.51:0,12,129	0/0:14,0:17:23.96:0,24,404	1/1:9,4:11:12.47:188,12,0	1/1:3,6:9:6.02:128,6,0	1/1:6,10:16:6.02:128,6,0	0/0:16,0:17:42.14:0,42,1332	0/0:8,0:8:18.06:0,18,537	0/0:40,0:41:71.32:0,71,2150	1/1:4,6:9:6.01:89,6,0	1/1:4,9:13:24.55:475,25,0	1/1:6,14:20:39.13:830,39,0	1/1:4,1:5:0.23:121,0,0
chr10	57615930	.	C	CT	3896.47	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=5.233;DP=448;FS=2.472;HRun=3;HaplotypeScore=90.8982;InbreedingCoeff=0.9171;MQ=51.01;MQ0=13;MQRankSum=0.461;QD=19.29;ReadPosRankSum=-0.116;VQSLOD=3.1382;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:23:18.59:0,19,224	0/0:7,0:6:16.37:0,16,92	0/0:3,0:1:3.01:0,3,36	0/0:5,0:4:2.91:0,3,35	0/0:22,0:20:34.66:0,35,223	0/0:28,0:28:81.24:0,81,957	0/0:4,0:4:11.97:0,12,125	0/0:23,0:13:29.09:0,29,293	1/1:5,4:9:21.35:184,21,0	1/1:2,14:16:41.16:483,41,0	1/1:5,17:20:52.12:582,52,0	0/0:15,0:15:36.11:0,36,431	0/0:13,0:13:21.06:0,21,251	0/0:22,0:21:57.13:0,57,666	1/1:14,7:21:9.32:222,9,0	0/0:12,0:12:24.14:0,24,95	0/0:11,0:10:19.16:0,19,129	0/0:29,0:27:64.60:0,65,456	1/1:9,9:17:13.98:262,14,0	1/1:6,16:21:46.20:543,46,0	1/1:3,6:9:16.96:192,17,0	0/0:6,0:5:12.02:0,12,132	0/0:13,0:12:24.06:0,24,275	0/0:9,0:9:24.07:0,24,287	1/1:12,8:20:11.66:258,12,0	1/1:10,17:27:49.42:574,49,0	1/1:13,13:25:16.81:316,17,0	1/1:3,9:11:25.34:280,25,0
chr10	57615938	.	A	AAAAAG	9401.90	PASS	AB=0.666;AC=27;AF=0.482;AN=56;BaseQRankSum=9.853;DP=478;FS=10.954;HRun=0;HaplotypeScore=103.9970;InbreedingCoeff=0.2021;MQ=54.86;MQ0=9;MQRankSum=1.443;QD=26.04;ReadPosRankSum=3.588;VQSLOD=3.9444;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,0:26:26.73:694,27,0	0/1:2,0:7:9.39:285,0,9	0/1:5,0:2:0.80:1,0,54	0/0:7,0:6:6.11:0,6,82	1/1:4,0:19:17.63:592,18,0	0/0:30,0:30:84.25:0,84,1540	0/0:5,0:5:12.04:0,12,224	0/1:15,0:18:99:354,0,152	1/1:4,0:11:24.06:296,24,0	1/1:2,0:19:26.70:685,27,0	1/1:3,0:19:29.73:753,30,0	0/0:14,0:14:39.13:0,39,732	0/0:11,0:11:26.94:0,27,371	0/0:22,0:21:57.13:0,57,896	0/1:8,0:16:76.66:275,0,77	1/1:1,13:16:27.09:808,27,0	0/1:7,0:14:36.82:225,0,37	0/1:6,0:28:46.59:707,0,47	0/1:6,0:21:76.80:486,0,77	1/1:3,0:23:36.29:815,36,0	0/1:6,0:12:54.36:313,0,54	0/0:7,0:6:12.04:0,12,235	0/0:9,0:9:27.08:0,27,497	0/0:12,0:12:30.09:0,30,555	0/1:13,0:22:99:383,0,114	0/1:7,0:31:49.96:915,0,50	0/1:12,0:28:89.08:442,0,89	1/1:1,0:12:2.65:374,3,0
chr10	57616258	.	C	CT	1032.61	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=8.148;DP=697;FS=1.622;HRun=0;HaplotypeScore=69.2535;InbreedingCoeff=0.9994;MQ=80.75;MQ0=0;MQRankSum=-0.677;QD=39.72;ReadPosRankSum=0.733;VQSLOD=4.1440;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,126,1726	0/0:10,0:10:30.10:0,30,416	0/0:23,0:23:47.69:0,48,708	0/0:21,0:21:60.06:0,60,722	0/0:18,0:18:54.15:0,54,733	0/0:21,0:21:63.21:0,63,879	0/0:33,0:33:99:0,99,1349	0/0:31,0:31:90.29:0,90,1242	0/0:25,0:25:75.24:0,75,1032	0/0:28,0:28:81.27:0,81,1119	0/0:26,0:26:72.13:0,72,960	0/0:34,0:34:99:0,102,1409	0/0:23,0:23:69.23:0,69,957	0/0:30,0:30:90.27:0,90,1215	0/0:30,0:30:87.27:0,87,1195	1/1:0,26:26:75.25:1127,75,0	0/0:34,0:34:99:0,102,1353	0/0:22,0:22:60.18:0,60,820	0/0:14,0:14:42.12:0,42,568	0/0:25,0:25:65.95:0,66,883	0/0:37,0:37:99:0,108,1493	0/0:22,0:22:66.21:0,66,905	0/0:16,0:16:44.97:0,45,585	0/0:19,0:19:54.18:0,54,755	0/0:20,0:20:57.16:0,57,776	0/0:27,0:27:81.25:0,81,1089	0/0:24,0:24:72.24:0,72,1005	0/0:15,0:15:42.14:0,42,585
chr10	57617117	.	AGTCTTG	A	2051.10	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.313;DP=702;FS=13.194;HRun=0;HaplotypeScore=146.7939;InbreedingCoeff=0.9941;MQ=74.25;MQ0=0;MQRankSum=-7.399;QD=41.02;ReadPosRankSum=-0.583;VQSLOD=2.5519;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,114,3948	1/1:3,8:9:14.89:360,15,0	0/0:29,0:29:79.15:0,79,2473	0/0:22,0:23:59.19:0,59,1786	0/0:28,0:28:81.28:0,81,2869	0/0:16,0:16:45.07:0,45,1465	0/0:19,0:19:54.19:0,54,1908	1/1:3,12:15:36.11:750,36,0	0/0:24,0:24:72.25:0,72,2572	0/0:31,0:31:93.32:0,93,3348	0/0:21,0:21:51.18:0,51,1805	0/0:29,0:29:84.29:0,84,3023	0/0:25,0:25:75.21:0,75,2558	0/0:24,0:24:66.23:0,66,2354	0/0:30,0:30:90.29:0,90,3018	0/0:20,0:20:60.21:0,60,2118	1/1:3,20:24:45.15:1081,45,0	0/0:26,0:25:72.25:0,72,2563	0/0:28,0:28:84.27:0,84,2684	0/0:19,0:19:57.20:0,57,2006	0/0:42,0:42:99:0,120,4239	0/0:26,0:26:75.26:0,75,2608	0/0:24,0:24:69.24:0,69,2382	0/0:26,0:26:78.27:0,78,2785	0/0:30,0:30:78.27:0,78,2739	0/0:31,0:31:93.32:0,93,3232	0/0:23,0:23:69.24:0,69,2477	0/0:19,0:19:54.19:0,54,1935
chr10	57617351	.	T	TC	136.79	PASS	AB=0.759;AC=1;AF=0.018;AN=56;BaseQRankSum=-4.211;DP=603;FS=0.000;HRun=2;HaplotypeScore=49.7697;InbreedingCoeff=-0.0256;MQ=51.51;MQ0=76;MQRankSum=0.534;QD=6.22;ReadPosRankSum=3.811;VQSLOD=0.8073;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:24:54.16:0,54,657	0/0:9,0:6:18.04:0,18,211	0/0:25,0:1:2.98:0,3,21	0/0:26,0:2:6.02:0,6,71	0/0:25,0:19:57.16:0,57,686	0/0:8,0:6:18.06:0,18,221	0/0:27,0:26:75.24:0,75,928	0/0:17,0:5:15.05:0,15,186	0/0:26,0:26:69.22:0,69,855	0/0:14,0:12:33.10:0,33,399	0/0:12,0:10:30.09:0,30,372	0/0:31,0:31:87.26:0,87,1065	0/0:23,0:22:63.20:0,63,781	0/0:32,0:32:87.27:0,87,1075	0/0:25,0:24:72.23:0,72,890	0/1:15,7:19:99:211,0,324	0/0:16,0:14:36.11:0,36,446	0/0:20,0:20:60.19:0,60,744	0/0:23,0:11:33.10:0,33,409	0/0:10,0:8:21.05:0,21,248	0/0:62,0:55:99:0,156,1918	0/0:13,0:10:24.08:0,24,297	0/0:13,0:11:27.07:0,27,321	0/0:38,0:37:99:0,105,1281	0/0:13,0:11:24.07:0,24,297	0/0:23,0:15:45.14:0,45,557	0/0:18,0:17:48.15:0,48,593	0/0:3,0:3:9.03:0,9,107
chr10	57617414	.	T	TC	210.67	PASS	AC=2;AF=0.037;AN=54;BaseQRankSum=3.053;DP=669;FS=3.460;HRun=2;HaplotypeScore=60.2580;InbreedingCoeff=0.7924;MQ=50.51;MQ0=81;MQRankSum=3.079;QD=14.04;ReadPosRankSum=1.718;VQSLOD=3.1373;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:28:57.14:0,57,687	0/0:12,0:10:24.07:0,24,295	0/0:22,0:1:3.01:0,3,37	./.	0/0:18,0:17:39.12:0,39,481	0/0:23,0:21:45.14:0,45,556	0/0:28,0:27:74.83:0,75,929	0/0:42,0:16:42.13:0,42,519	0/0:31,0:30:81.24:0,81,991	0/0:24,0:19:57.17:0,57,698	0/0:10,0:10:18.06:0,18,223	0/0:30,0:29:81.19:0,81,962	0/0:21,0:20:54.16:0,54,657	0/0:28,0:28:69.20:0,69,842	0/0:31,0:30:81.25:0,81,1004	1/1:2,13:11:21.07:302,21,0	0/0:24,0:22:54.14:0,54,652	0/0:28,0:28:78.21:0,78,949	0/0:19,0:7:18.06:0,18,223	0/0:15,0:15:33.09:0,33,397	0/0:69,0:63:99:0,159,1956	0/0:18,0:17:27.06:0,27,310	0/0:17,0:16:42.13:0,42,520	0/0:30,0:29:81.25:0,81,1003	0/0:19,0:18:42.12:0,42,521	0/0:18,0:14:42.13:0,42,520	0/0:22,0:22:60.18:0,60,730	0/0:5,0:4:9.01:0,9,98
chr10	57620894	.	GT	G	147.92	PASS	AB=0.625;AC=1;AF=0.018;AN=56;BaseQRankSum=4.957;DP=679;FS=6.959;HRun=8;HaplotypeScore=69.5727;InbreedingCoeff=-0.0123;MQ=61.83;MQ0=3;MQRankSum=-0.820;QD=7.40;ReadPosRankSum=-1.421;VQSLOD=0.7392;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,126,1442	0/0:18,0:18:51.12:0,51,599	0/0:14,0:12:26.81:0,27,281	0/0:22,1:17:36.62:0,37,393	0/0:26,0:26:63.19:0,63,761	0/0:32,0:32:90.22:0,90,1059	0/0:20,0:20:54.17:0,54,652	0/0:19,0:19:39.12:0,39,471	0/0:18,0:18:45.14:0,45,544	0/0:18,0:18:48.14:0,48,569	0/0:15,0:15:45.14:0,45,543	0/0:16,0:16:42.12:0,42,497	0/0:23,0:23:60.18:0,60,725	0/0:29,0:29:78.20:0,78,925	0/0:20,0:20:57.15:0,57,666	0/1:8,12:20:25.28:222,0,25	0/0:38,0:37:99:0,108,1274	0/0:36,0:36:92.27:0,92,1108	0/0:23,0:23:57.16:0,57,672	0/0:27,0:26:60.14:0,60,703	0/0:16,0:16:42.02:0,42,466	0/0:28,0:28:75.23:0,75,906	0/0:27,0:27:69.20:0,69,821	0/0:34,0:34:99:0,102,1231	0/0:21,0:21:54.15:0,54,633	0/0:28,0:28:84.24:0,84,993	0/0:25,0:25:66.20:0,66,797	0/0:17,0:17:45.11:0,45,518
chr10	57624271	.	C	CA	8631.55	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-7.893;DP=547;FS=0.000;HRun=2;HaplotypeScore=72.1889;InbreedingCoeff=0.9986;MQ=74.21;MQ0=0;MQRankSum=-3.698;QD=36.89;ReadPosRankSum=3.336;VQSLOD=5.4290;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,108,1302	0/0:15,0:15:45.08:0,45,522	0/0:14,0:14:33.10:0,33,394	0/0:11,0:10:30.04:0,30,347	0/0:15,0:15:39.12:0,39,483	0/0:13,0:13:30.09:0,30,372	0/0:25,0:25:72.21:0,72,879	0/0:23,0:23:63.18:0,63,758	1/1:2,15:17:42.14:605,42,0	1/1:1,24:25:72.23:1016,72,0	1/1:1,15:16:42.14:605,42,0	0/0:19,0:19:54.15:0,54,645	0/0:18,0:18:51.14:0,51,618	0/0:15,0:15:45.14:0,45,557	1/1:6,20:26:57.19:820,57,0	0/0:15,0:15:45.13:0,45,544	0/0:21,0:21:57.15:0,57,680	0/0:20,0:20:48.07:0,48,593	1/1:2,20:22:60.18:831,60,0	1/1:1,20:21:54.14:754,54,0	1/1:2,24:26:63.21:906,63,0	0/0:17,0:17:48.14:0,48,582	0/0:22,0:22:63.19:0,63,768	0/0:7,0:7:18.06:0,18,223	1/1:1,24:25:63.21:906,63,0	1/1:1,17:18:51.17:733,51,0	1/1:2,24:27:69.23:981,69,0	1/1:0,11:11:33.11:474,33,0
chr10	57624876	.	CTT	C	4411.92	PASS	AB=0.568;AC=23;AF=0.411;AN=56;BaseQRankSum=-4.987;DP=632;FS=3.311;HRun=13;HaplotypeScore=99.8844;InbreedingCoeff=0.9043;MQ=71.75;MQ0=9;MQRankSum=1.884;QD=18.85;ReadPosRankSum=3.502;VQSLOD=4.4952;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:22:39.95:0,40,405	0/0:5,0:15:24:0,24,239	0/0:66,0:23:12.07:0,12,216	0/0:70,0:24:17.61:0,18,237	0/0:16,0:28:57.06:0,57,570	0/0:18,1:21:30.68:0,31,713	0/0:11,0:12:23.56:0,24,290	0/0:16,0:32:63.43:0,63,591	1/1:5,12:17:30.01:291,30,0	1/1:3,20:22:48.51:466,49,0	1/1:4,19:26:41.32:413,41,0	0/0:15,0:15:43.34:0,43,586	0/0:8,0:9:20.56:0,21,269	0/0:11,0:13:26.87:0,27,341	1/1:5,17:24:41.71:440,42,0	1/1:0,0:6:16.92:86,17,0	0/0:11,0:35:75.12:0,75,806	0/0:11,0:12:24.07:0,24,296	1/1:7,13:20:39.01:368,39,0	1/1:5,18:24:59.44:525,59,0	1/1:1,4:5:7.10:84,7,0	0/0:9,0:9:24.08:0,24,335	0/0:21,0:26:64.89:0,65,781	0/0:8,0:8:21.07:0,21,292	1/1:3,17:20:39.04:378,39,0	1/1:2,24:26:72.07:688,72,0	1/1:6,15:22:38.94:358,39,0	0/1:5,14:21:40.11:314,0,40
chr10	57625371	.	AT	A	157.03	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.287;DP=370;FS=0.000;HRun=1;HaplotypeScore=37.1853;InbreedingCoeff=0.8991;MQ=78.56;MQ0=3;MQRankSum=-1.372;QD=22.43;ReadPosRankSum=-1.579;VQSLOD=3.0212;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:48.15:0,48,740	0/0:4,0:4:12.04:0,12,192	0/0:30,3:18:41.81:0,42,710	0/0:19,0:10:16.78:0,17,260	0/0:14,0:14:42.14:0,42,671	0/0:9,0:9:24.08:0,24,384	0/0:9,0:9:21.07:0,21,336	0/0:25,0:25:75.25:0,75,1175	0/0:8,0:8:24.08:0,24,383	0/0:17,0:17:51.17:0,51,810	0/0:13,0:13:39.12:0,39,597	0/0:10,0:10:27.09:0,27,427	0/0:7,0:7:21.06:0,21,313	0/0:6,0:6:18.04:0,18,263	0/0:14,0:14:42.14:0,42,669	1/1:0,7:7:18.06:248,18,0	0/0:7,0:7:21.07:0,21,327	0/0:9,0:9:24.04:0,24,356	0/0:16,0:16:48.15:0,48,738	0/0:11,0:11:33.11:0,33,528	0/0:8,0:8:24.08:0,24,381	0/0:4,0:4:12.04:0,12,192	0/0:11,0:11:33.11:0,33,528	0/0:12,0:12:36.12:0,36,573	0/0:16,0:16:48.15:0,48,745	0/0:19,0:19:57.19:0,57,910	0/0:22,0:22:60.17:0,60,909	0/0:21,0:21:57.19:0,57,907
chr10	57627269	.	C	CTT	334.67	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.093;DP=471;FS=2.515;HRun=8;HaplotypeScore=67.8323;InbreedingCoeff=0.8441;MQ=66.99;MQ0=6;MQRankSum=0.146;QD=27.89;ReadPosRankSum=0.531;VQSLOD=3.5667;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:60.13:0,60,651	0/0:13,0:13:30.03:0,30,321	0/0:27,0:13:16.24:0,16,165	0/0:28,0:13:6.34:0,6,140	0/0:21,0:21:48.10:0,48,526	0/0:14,0:14:36.07:0,36,392	0/0:23,0:23:57.14:0,57,635	0/0:29,0:27:57.11:0,57,628	0/0:11,0:11:21.04:0,21,234	0/0:30,0:30:81.20:0,81,902	0/0:14,0:14:39.10:0,39,434	0/0:11,0:11:21.03:0,21,225	0/0:18,0:18:45.10:0,45,501	0/0:13,0:13:36.10:0,36,401	0/0:10,0:10:27.07:0,27,301	1/1:3,9:12:27.09:429,27,0	0/0:21,0:21:54.13:0,54,602	0/0:11,0:11:27.04:0,27,288	0/0:22,0:22:48.10:0,48,527	0/0:15,0:15:18.75:0,19,442	0/0:9,0:9:17.91:0,18,201	0/0:7,0:7:21.06:0,21,234	0/0:8,0:8:18.05:0,18,201	0/0:10,0:10:21.05:0,21,234	0/0:17,0:17:42.11:0,42,468	0/0:20,0:20:54.10:0,54,580	0/0:11,0:11:29.59:0,30,292	0/0:18,0:17:12.42:0,12,374
chr10	57627335	.	A	AT	2351.54	PASS	AB=1.000;AC=18;AF=0.321;AN=56;BaseQRankSum=-5.727;DP=375;FS=2.154;HRun=10;HaplotypeScore=60.3925;InbreedingCoeff=0.4920;MQ=59.23;MQ0=6;MQRankSum=1.337;QD=11.04;ReadPosRankSum=-1.299;VQSLOD=2.6491;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:25:40.55:318,41,0	1/1:2,9:11:24.06:254,24,0	0/1:6,0:2:16.15:16,0,18	0/0:9,0:5:2.22:0,2,7	1/1:22,0:22:55.81:335,56,0	0/0:19,0:19:50.91:0,51,417	0/0:13,0:13:20.95:0,21,172	1/1:8,15:22:48.10:501,48,0	0/0:4,0:4:8.59:0,9,47	0/0:24,0:23:7.85:0,8,138	0/1:18,0:18:32.74:34,0,33	0/0:5,0:4:11.99:0,12,98	0/0:13,0:13:26.91:0,27,217	0/0:10,0:10:29.97:0,30,246	0/0:4,0:4:11.23:0,11,54	0/0:3,0:4:1.80:0,2,5	1/1:6,25:31:60.10:627,60,0	1/1:4,16:19:20.47:423,20,0	0/0:16,0:14:10.85:0,11,53	0/0:12,0:12:16.57:0,17,87	0/0:5,0:4:8.64:0,9,48	0/0:2,0:2:5.99:0,6,49	0/0:9,0:9:23.97:0,24,197	0/0:10,0:10:20.96:0,21,172	0/1:12,0:12:1.07:1,0,74	0/1:20,0:20:18.96:19,0,86	0/1:15,0:15:3.19:3,0,101	0/1:10,0:10:2.90:3,0,59
chr10	57627340	.	T	TA	1626.21	PASS	AB=1.000;AC=8;AF=0.143;AN=56;BaseQRankSum=-5.019;DP=379;FS=3.427;HRun=0;HaplotypeScore=60.7120;InbreedingCoeff=0.3865;MQ=58.99;MQ0=7;MQRankSum=1.053;QD=12.14;ReadPosRankSum=4.748;VQSLOD=3.8190;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,25:27:22.29:717,22,0	0/1:10,0:10:3.49:30,0,3	0/0:6,0:2:2.31:0,2,40	0/0:9,0:5:2.98:0,3,22	1/1:0,24:24:63.06:824,63,0	0/0:20,0:20:60.15:0,60,782	0/0:10,0:10:30.03:0,30,363	0/1:23,0:22:70.39:70,0,87	0/0:3,0:3:9.03:0,9,115	0/0:24,0:23:68.83:0,69,751	0/0:17,0:17:35.79:0,36,319	0/0:8,0:7:18.04:0,18,219	0/0:13,0:13:39.09:0,39,479	0/0:12,0:12:33.07:0,33,439	0/0:4,0:4:12.04:0,12,154	0/0:7,0:4:11.94:0,12,95	0/1:30,0:30:21.94:88,0,22	0/1:20,0:19:43.32:43,0,53	0/0:16,0:13:36.33:0,36,359	0/0:12,0:12:36.06:0,36,389	0/0:5,0:4:12.03:0,12,143	0/0:3,0:3:9.02:0,9,108	0/0:9,0:9:27.08:0,27,359	0/0:11,0:11:27.04:0,27,340	0/0:12,0:12:34.33:0,34,391	0/0:18,0:18:50.36:0,50,531	0/0:16,0:16:43.30:0,43,476	0/0:10,0:10:29.98:0,30,310
chr10	57628462	.	T	TA	1401.76	PASS	AB=0.688;AC=18;AF=0.333;AN=54;BaseQRankSum=-7.730;DP=288;FS=2.053;HRun=12;HaplotypeScore=42.4463;InbreedingCoeff=0.6802;MQ=65.95;MQ0=27;MQRankSum=1.370;QD=14.16;ReadPosRankSum=-1.340;VQSLOD=3.4089;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:26:38.70:0,39,113	0/0:1,0:2:2.04:0,2,6	0/0:9,0:10:13.56:0,14,104	0/0:7,0:5:0.62:0,1,29	0/0:5,0:16:22.39:0,22,66	0/0:24,0:24:53.56:0,54,388	0/0:7,0:8:22.92:0,23,159	0/0:6,0:11:16.78:0,17,53	./.	1/1:4,7:11:20.99:191,21,0	0/1:4,6:10:3.88:128,0,4	0/0:5,0:4:11.93:0,12,88	0/0:5,0:4:11.93:0,12,88	0/0:6,0:5:14.91:0,15,109	1/1:2,6:6:15.02:146,15,0	0/0:0,0:3:6.11:0,6,18	0/0:4,0:17:30.56:0,31,88	0/0:1,0:23:40.74:0,41,119	0/1:8,4:10:0.97:77,0,1	1/1:2,4:4:6.01:58,6,0	1/1:1,2:2:3:29,3,0	0/0:2,0:2:2.96:0,3,21	0/0:2,0:2:5.02:0,5,28	0/0:2,0:2:5.97:0,6,44	1/1:4,13:16:30.19:342,30,0	1/1:3,3:6:6.01:58,6,0	1/1:4,4:8:17.70:145,18,0	1/1:2,14:15:42.07:409,42,0
chr10	57628722	.	G	GAC	1684.27	PASS	AB=0.570;AC=5;AF=0.089;AN=56;BaseQRankSum=-5.639;DP=680;FS=3.785;HRun=0;HaplotypeScore=92.8621;InbreedingCoeff=0.8697;MQ=59.21;MQ0=8;MQRankSum=1.665;QD=16.84;ReadPosRankSum=1.184;VQSLOD=3.7627;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:13,40:53:0.86:919,0,1	0/0:6,0:6:12.04:0,12,144	0/0:42,0:19:22.10:0,22,205	0/0:50,0:24:19.94:0,20,242	1/1:8,16:24:31.90:455,32,0	0/0:25,0:25:45.09:0,45,533	0/0:31,0:31:63.16:0,63,736	0/0:23,0:25:47.71:0,48,525	0/0:12,0:13:31.91:0,32,378	0/0:23,0:23:41.60:0,42,463	0/0:19,0:20:35.77:0,36,392	0/0:16,0:16:24.07:0,24,290	0/0:15,0:15:21.06:0,21,254	0/0:18,0:19:44.97:0,45,516	0/0:22,0:22:41.72:0,42,482	0/0:23,0:23:32.50:0,32,324	0/0:40,0:41:90.08:0,90,1061	1/1:5,18:23:22.90:440,23,0	0/0:14,0:14:35.61:0,36,389	0/0:17,0:19:41.96:0,42,484	0/0:36,0:37:90.09:0,90,1055	0/0:16,0:16:24.04:0,24,290	0/0:13,0:13:29.47:0,29,309	0/0:34,0:36:72.01:0,72,822	0/0:12,0:12:30.08:0,30,349	0/0:24,0:23:48.14:0,48,572	0/0:20,0:20:54.12:0,54,616	0/0:17,0:17:40.94:0,41,476
chr10	57628752	.	C	CACAG	137.23	PASS	AB=0.588;AC=1;AF=0.018;AN=56;BaseQRankSum=2.572;DP=676;FS=0.000;HRun=0;HaplotypeScore=119.7867;InbreedingCoeff=0.0792;MQ=58.55;MQ0=9;MQRankSum=-0.504;QD=6.86;ReadPosRankSum=0.930;VQSLOD=2.6049;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:84.13:0,84,1067	0/0:4,0:4:9.03:0,9,149	0/0:22,0:10:14.03:0,14,162	0/0:41,0:14:26.04:0,26,295	0/0:30,0:30:57.89:0,58,718	0/0:21,0:21:45.10:0,45,683	0/0:24,0:24:54.06:0,54,778	0/0:30,0:30:57.12:0,57,731	0/0:16,0:16:42.08:0,42,601	0/0:25,0:25:66.06:0,66,830	0/0:26,0:26:59.42:0,59,713	0/0:13,0:13:36.07:0,36,496	0/0:13,0:13:33.10:0,33,518	0/0:20,0:20:32.87:0,33,396	0/0:23,0:23:51.10:0,51,731	0/1:6,14:20:11.92:212,0,12	0/0:41,0:41:80.99:0,81,1095	0/0:26,0:26:54.07:0,54,741	0/0:25,0:24:56.89:0,57,648	0/0:20,0:19:39.02:0,39,501	0/0:50,0:49:99:0,111,1524	0/0:13,0:13:29.81:0,30,364	0/0:16,0:16:33.02:0,33,424	0/0:33,0:33:78.15:0,78,1118	0/0:12,0:12:27.05:0,27,351	0/0:30,0:28:75.15:0,75,1131	0/0:21,0:21:51.03:0,51,649	0/0:16,0:16:45.03:0,45,672
chr10	57629945	.	AC	A	7509.72	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=13.017;DP=637;FS=2.735;HRun=4;HaplotypeScore=69.5545;InbreedingCoeff=0.9989;MQ=73.89;MQ0=0;MQRankSum=-0.927;QD=31.96;ReadPosRankSum=2.742;VQSLOD=5.6058;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,102,1338	0/0:8,0:8:24.07:0,24,316	0/0:30,0:26:72.06:0,72,880	0/0:34,0:28:19.79:0,20,506	0/0:38,0:38:99:0,105,1377	0/0:20,0:20:59.95:0,60,764	0/0:22,0:22:66.19:0,66,863	0/0:24,0:24:72.21:0,72,935	1/1:0,12:12:33.10:394,33,0	1/1:1,24:25:75.21:884,75,0	1/1:0,20:20:57.09:658,57,0	0/0:14,0:14:42.05:0,42,555	0/0:18,0:18:51.17:0,51,703	0/0:22,0:22:60.16:0,60,780	1/1:1,19:20:48.15:574,48,0	0/0:23,0:23:63.21:0,63,868	0/0:31,0:31:81.22:0,81,1079	0/0:20,0:20:54.13:0,54,722	1/1:1,17:18:48.13:563,48,0	1/1:1,25:26:75.06:846,75,0	1/1:1,21:22:60.18:718,60,0	0/0:21,0:21:63.21:0,63,869	0/0:21,0:21:54.15:0,54,698	0/0:19,0:19:48.16:0,48,661	1/1:1,24:25:60.05:697,60,0	1/1:0,27:27:81.23:956,81,0	1/1:0,24:24:57.17:681,57,0	1/1:0,16:16:45.14:538,45,0
chr10	57630325	.	A	ATC	2997.68	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-7.959;DP=725;FS=8.176;HRun=0;HaplotypeScore=102.7622;InbreedingCoeff=0.9846;MQ=65.25;MQ0=0;MQRankSum=1.748;QD=29.98;ReadPosRankSum=1.917;VQSLOD=5.6532;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:14,32:46:41.18:1147,41,0	0/0:8,0:8:12.03:0,12,148	0/0:26,0:25:40.02:0,40,515	0/0:32,0:27:28.91:0,29,451	1/1:5,21:26:60.20:966,60,0	0/0:22,0:22:54.17:0,54,665	0/0:34,0:34:54.23:0,54,883	0/0:49,0:48:93.26:0,93,1109	0/0:40,0:40:99:0,111,1340	0/0:22,0:22:45.13:0,45,536	0/0:15,0:15:42.13:0,42,513	0/0:25,0:25:60.16:0,60,713	0/0:16,0:16:17.14:0,17,443	0/0:24,0:24:54.17:0,54,665	0/0:31,0:31:69.17:0,69,832	0/0:25,0:27:47.81:0,48,537	0/0:28,0:27:57.10:0,57,666	1/1:5,22:27:63.22:1028,63,0	0/0:24,0:24:60.17:0,60,716	0/0:20,0:20:48.15:0,48,591	0/0:49,0:48:99:0,111,1330	0/0:15,0:15:24.02:0,24,278	0/0:15,0:15:42.08:0,42,488	0/0:26,0:26:66.16:0,66,795	0/0:15,0:15:38.94:0,39,445	0/0:23,0:23:63.19:0,63,764	0/0:23,0:23:45.12:0,45,540	0/0:14,0:14:39.12:0,39,480
chr10	57630373	.	C	CTCTGTG	1941.07	PASS	AB=0.581;AC=7;AF=0.125;AN=56;BaseQRankSum=6.712;DP=768;FS=2.718;HRun=0;HaplotypeScore=127.4979;InbreedingCoeff=0.8003;MQ=51.22;MQ0=88;MQRankSum=-7.860;QD=25.54;ReadPosRankSum=-0.778;VQSLOD=3.2139;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:32:63.22:0,63,1401	1/1:0,5:6:9.02:268,9,0	0/0:41,0:11:18.01:0,18,239	0/0:73,0:19:33.29:0,33,466	0/0:24,0:17:51.14:0,51,1030	0/0:25,0:20:50.88:0,51,1027	0/0:35,0:20:45.06:0,45,885	1/1:11,0:9:15.01:234,15,0	0/0:40,0:36:99:0,108,2327	0/0:26,0:18:54.19:0,54,1186	0/0:16,0:12:30.07:0,30,635	0/0:32,0:31:87.26:0,87,1790	0/0:19,0:16:42.13:0,42,860	0/0:18,0:17:48.13:0,48,1016	0/0:37,0:33:84.23:0,84,1663	0/1:10,26:30:99:992,0,254	1/1:13,10:17:14.04:587,14,0	0/0:20,0:19:45.15:0,45,999	0/0:27,0:21:57.17:0,57,1104	0/0:24,0:20:54.17:0,54,1173	0/0:53,0:42:90.27:0,90,1929	0/0:21,0:14:42.12:0,42,851	0/0:14,0:11:33.10:0,33,715	0/0:29,0:27:72.25:0,72,1621	0/0:13,0:10:30.10:0,30,687	0/0:24,0:16:42.13:0,42,849	0/0:15,0:13:36.12:0,36,808	0/0:24,0:24:58.75:0,59,1249
chr10	57630602	.	A	AC	2154.20	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-5.176;DP=535;FS=7.759;HRun=5;HaplotypeScore=63.4591;InbreedingCoeff=0.9932;MQ=76.82;MQ0=1;MQRankSum=-2.309;QD=29.11;ReadPosRankSum=0.813;VQSLOD=4.0300;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:96.24:0,96,1031	1/1:1,9:10:27.09:354,27,0	0/0:19,0:17:15.23:0,15,306	0/0:25,0:25:44.22:0,44,408	0/0:18,0:18:42.09:0,42,443	0/0:17,0:17:48.12:0,48,516	0/0:30,0:30:72.18:0,72,772	1/1:4,16:20:48.15:618,48,0	0/0:19,0:19:51.12:0,51,545	0/0:18,0:18:54.14:0,54,580	0/0:18,0:18:45.11:0,45,479	0/0:23,0:23:66.17:0,66,709	0/0:13,0:13:39.09:0,39,413	0/0:17,0:17:45.06:0,45,462	0/0:12,0:12:27.06:0,27,290	1/1:4,9:13:21.07:276,21,0	1/1:1,30:31:81.26:1066,81,0	0/0:16,0:16:42.10:0,42,451	0/0:13,0:13:33.08:0,33,353	0/0:15,0:15:39.08:0,39,411	0/0:33,0:32:81.20:0,81,870	0/0:11,0:11:30.07:0,30,322	0/0:16,0:16:45.08:0,45,466	0/0:24,0:24:51.08:0,51,535	0/0:17,0:17:42.10:0,42,450	0/0:23,0:23:66.15:0,66,700	0/0:17,0:17:45.07:0,45,463	0/0:9,0:9:24.06:0,24,257
chr10	57631096	.	TC	T	1331.96	PASS	AB=0.732;AC=5;AF=0.089;AN=56;BaseQRankSum=4.408;DP=396;FS=48.913;HRun=1;HaplotypeScore=77.8531;InbreedingCoeff=-0.0531;MQ=44.30;MQ0=12;MQRankSum=-4.920;QD=15.31;ReadPosRankSum=-0.494;VQSLOD=0.6650;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:8,18:26:12.73:558,0,13	0/0:7,0:6:6.44:0,6,60	0/0:10,0:1:3.01:0,3,34	0/0:9,1:2:6.02:0,6,82	0/1:15,13:28:99:483,0,138	0/0:8,0:8:21.07:0,21,318	0/0:16,0:16:45.14:0,45,646	0/0:27,0:22:35.54:0,36,439	0/0:12,0:12:28.39:0,28,392	0/0:21,0:21:60.66:0,61,861	0/0:8,0:8:21.07:0,21,322	0/0:15,0:15:42.14:0,42,627	0/0:5,0:5:15.02:0,15,182	0/0:4,0:4:12.04:0,12,177	0/1:9,0:9:3.24:3,0,247	0/1:3,3:6:8.52:112,0,9	0/0:18,0:18:14.64:0,15,265	0/1:11,7:17:99:287,0,137	0/0:21,0:15:38.87:0,39,479	0/0:20,0:18:47.47:0,47,692	0/0:11,0:11:18.06:0,18,265	0/0:10,0:10:27.08:0,27,383	0/0:12,0:10:27.07:0,27,381	0/0:16,0:16:20.09:0,20,316	0/0:20,0:20:57.11:0,57,820	0/0:22,0:20:60.19:0,60,882	0/0:14,0:14:39.09:0,39,517	0/0:2,0:2:6.02:0,6,86
chr10	57631116	.	T	TC	1113.30	PASS	AB=0.966;AC=24;AF=0.429;AN=56;BaseQRankSum=4.399;DP=457;FS=12.234;HRun=0;HaplotypeScore=80.8536;InbreedingCoeff=-0.2550;MQ=48.56;MQ0=10;MQRankSum=0.209;QD=3.07;ReadPosRankSum=3.276;VQSLOD=1.7953;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:8,0:8:3.62:12,0,4	0/1:8,0:7:1.96:2,0,54	0/1:27,0:7:0.38:0,0,45	0/0:19,0:3:0:0,0,0	1/1:10,5:14:20.47:131,20,0	0/0:14,1:15:18.24:0,18,244	0/1:16,1:17:99:113,0,127	0/1:18,0:16:10.36:10,0,91	0/1:9,0:9:35.94:36,0,50	0/1:30,0:30:79.39:79,0,270	0/1:19,0:19:14.61:15,0,207	0/1:20,0:20:95.90:120,0,96	0/0:8,0:8:22.97:0,23,187	0/0:10,0:10:26.73:0,27,192	0/1:21,0:21:26.51:27,0,203	1/1:4,0:4:10.08:37,10,0	0/0:15,0:15:32.53:0,33,177	1/1:8,2:9:9.40:74,9,0	0/1:18,0:17:50.39:50,0,78	0/1:26,0:24:99:134,0,100	0/1:3,5:8:14.41:14,0,28	0/1:9,1:9:44.85:50,0,45	0/1:19,2:19:99:105,0,138	0/0:11,6:18:25.96:0,26,232	0/1:23,0:23:99:112,0,185	0/1:31,0:29:99:112,0,181	0/1:20,0:19:42.97:43,0,146	0/0:9,0:9:22.06:0,22,154
chr10	57631133	.	T	TAA	1013.05	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=7.173;DP=382;FS=47.705;HRun=0;HaplotypeScore=69.4837;InbreedingCoeff=0.9611;MQ=73.17;MQ0=6;MQRankSum=-6.419;QD=24.71;ReadPosRankSum=3.626;VQSLOD=2.1364;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,0:9:18.03:208,18,0	0/0:7,0:7:17.99:0,18,177	0/0:40,0:18:29.98:0,30,424	0/0:27,0:10:24.06:0,24,288	1/1:15,5:19:49.01:585,49,0	0/0:13,0:13:36.11:0,36,459	0/0:14,0:14:38.95:0,39,487	0/0:10,0:10:24.06:0,24,287	0/0:8,0:8:21.05:0,21,241	0/0:16,0:16:42:0,42,500	0/0:17,0:17:45.13:0,45,565	0/0:11,0:11:27.08:0,27,337	0/0:10,0:10:24.07:0,24,308	0/0:12,0:12:21.04:0,21,246	0/0:15,0:15:41.97:0,42,484	1/1:6,0:6:18.03:185,18,0	0/0:6,0:6:15.05:0,15,190	1/1:4,2:6:15.05:192,15,0	0/0:7,0:7:12.02:0,12,126	0/0:17,0:17:38.97:0,39,427	0/0:6,0:6:12.01:0,12,128	0/0:10,0:9:23.97:0,24,271	0/0:26,0:25:69.16:0,69,832	0/0:15,0:15:30.09:0,30,403	0/0:9,0:9:21.02:0,21,233	0/0:19,0:19:39.12:0,39,487	0/0:11,0:10:30.03:0,30,356	0/0:14,0:14:39.08:0,39,490
chr10	57633165	.	ACTCTCTCT	A	321.05	PASS	AB=0.886;AC=14;AF=0.318;AN=44;BaseQRankSum=3.126;DP=551;FS=2.451;HRun=0;HaplotypeScore=131.9883;InbreedingCoeff=0.3417;MQ=79.49;MQ0=16;MQRankSum=-1.844;QD=2.38;ReadPosRankSum=1.340;VQSLOD=2.4276;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,0:13:3.01:52,3,0	1/1:8,0:10:3.01:58,3,0	0/0:44,0:34:0.47:0,0,1	./.	0/0:13,0:14:0:0,0,0	./.	0/0:25,0:24:9.03:0,9,328	0/0:26,0:25:1.72:0,2,4	0/0:13,0:12:2.99:0,3,24	0/1:17,1:21:62.15:81,0,62	0/0:12,0:11:3.01:0,3,32	0/0:18,0:18:21.07:0,21,739	0/0:14,0:13:9.02:0,9,228	0/0:13,0:13:6.02:0,6,123	0/0:19,0:18:6.01:0,6,81	1/1:14,0:15:0.47:1,0,0	1/1:21,4:25:1.81:71,2,0	1/1:8,0:8:2.80:13,3,0	1/1:18,2:19:6.02:147,6,0	0/0:14,0:14:0:0,0,0	0/0:22,0:22:5.99:0,6,48	./.	./.	0/0:23,0:21:24.05:0,24,596	./.	0/0:27,0:27:10.52:0,11,105	0/1:21,0:22:18.39:18,0,18	./.
chr10	57633222	.	CGT	C	1783.68	PASS	AB=0.986;AC=22;AF=0.393;AN=56;BaseQRankSum=2.151;DP=404;FS=3.835;HRun=0;HaplotypeScore=66.9374;InbreedingCoeff=0.3547;MQ=47.36;MQ0=31;MQRankSum=2.786;QD=7.93;ReadPosRankSum=1.540;VQSLOD=2.8706;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:17:3:0,3,29	0/0:2,0:6:0:0,0,0	0/0:16,0:5:11.97:0,12,120	0/0:14,0:7:18.02:0,18,248	0/1:9,0:9:0:0,0,0	1/1:18,0:16:41.54:457,42,0	1/1:23,0:20:42.13:494,42,0	1/1:7,0:14:14.10:75,14,0	0/0:9,0:8:12.02:0,12,173	0/1:19,0:18:6.87:7,0,320	0/1:13,0:10:23.52:24,0,121	1/1:10,0:11:8.56:62,9,0	0/1:9,0:7:9:9,0,139	0/0:11,0:11:21.07:0,21,299	0/0:12,0:10:18.06:0,18,266	0/0:9,0:6:2.97:0,3,20	1/1:19,0:19:25.70:130,26,0	0/0:7,0:6:11.93:0,12,104	0/0:20,0:18:30.02:0,30,431	0/1:13,0:12:11.24:11,0,272	0/0:37,0:34:36.72:0,37,949	1/1:2,8:10:3.01:30,3,0	0/0:0,6:6:0:0,0,0	1/1:26,0:25:51.87:579,52,0	0/1:15,0:16:5.23:5,0,339	0/1:16,0:16:28.84:29,0,206	0/0:10,3:13:15.03:0,15,203	0/1:8,0:7:49.14:49,0,186
chr10	57634372	.	ACACAGCTGTTAGGACCCTGCACG	A	2001.51	PASS	AB=0.905;AC=4;AF=0.071;AN=56;BaseQRankSum=10.971;DP=878;FS=12.214;HRun=0;HaplotypeScore=491.9862;InbreedingCoeff=-0.0879;MQ=61.93;MQ0=6;MQRankSum=-1.339;QD=10.65;ReadPosRankSum=-2.646;VQSLOD=0.0623;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:67,0:60:99:857,0,309	0/0:8,0:8:24.04:0,24,443	0/0:24,0:14:5.46:0,5,140	0/0:25,0:16:30.58:0,31,293	0/1:15,24:38:67.37:67,0,167	0/0:29,0:28:78.13:0,78,1629	0/0:35,0:35:94.64:0,95,1904	0/0:29,0:29:75.17:0,75,1060	0/0:37,0:37:99:0,99,2039	0/0:22,0:22:60.04:0,60,1170	0/0:18,0:18:48.16:0,48,946	0/0:38,0:38:99:0,99,2147	0/0:35,0:35:98.56:0,99,1714	0/0:34,0:34:93.16:0,93,1697	0/0:37,0:37:99:0,105,2095	0/1:45,0:44:99:644,0,623	0/0:40,0:40:99:0,111,2358	0/1:37,0:36:99:541,0,240	0/0:28,0:24:53.04:0,53,933	0/0:25,0:25:71.90:0,72,1384	0/0:81,0:80:99:0,211,4169	0/0:20,0:20:54.17:0,54,1108	0/0:19,0:19:45.06:0,45,918	0/0:32,0:32:96.29:0,96,2121	0/0:17,0:17:48.14:0,48,1014	0/0:29,0:29:84.22:0,84,1660	0/0:25,0:25:57.11:0,57,1218	0/0:3,0:3:3:0,3,26
chr10	57636206	.	GA	G	4999.43	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=17.203;DP=732;FS=7.410;HRun=3;HaplotypeScore=114.7502;InbreedingCoeff=0.9913;MQ=74.50;MQ0=0;MQRankSum=-13.532;QD=28.09;ReadPosRankSum=-3.127;VQSLOD=2.7927;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:9,36:45:99:1189,99,0	1/1:2,16:18:54.12:637,54,0	0/0:14,0:14:42.11:0,42,566	0/0:19,0:19:53.71:0,54,643	1/1:6,16:22:14.89:185,15,0	0/0:23,0:23:69.20:0,69,939	0/0:47,0:47:99:0,135,1922	1/1:3,23:26:72.21:871,72,0	0/0:32,0:32:96.32:0,96,1378	0/0:33,0:33:81.24:0,81,1103	0/0:18,0:18:39.12:0,39,546	0/0:22,0:22:66.22:0,66,950	0/0:27,0:27:78.25:0,78,1100	0/0:28,0:28:81.27:0,81,1165	0/0:20,0:20:60.19:0,60,845	1/1:1,23:24:28.97:791,29,0	1/1:1,20:21:53.40:618,53,0	1/1:5,17:22:60.10:709,60,0	0/0:20,0:20:57.17:0,57,778	0/0:30,0:30:72.21:0,72,985	0/0:51,0:51:99:0,147,2074	0/0:27,0:27:69.10:0,69,855	0/0:22,0:22:54.13:0,54,705	0/0:34,0:34:90.30:0,90,1293	0/0:17,0:17:48.15:0,48,673	0/0:30,0:30:84.23:0,84,1101	0/0:36,0:36:99:0,105,1509	0/0:4,0:4:12.04:0,12,173
chr10	57636225	.	A	AG	5389.19	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=15.189;DP=632;FS=9.250;HRun=0;HaplotypeScore=110.5549;InbreedingCoeff=0.9953;MQ=76.80;MQ0=0;MQRankSum=-11.785;QD=34.33;ReadPosRankSum=-0.094;VQSLOD=3.4139;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,37:42:69.22:1069,69,0	1/1:2,16:18:45.14:684,45,0	0/0:15,0:15:45.10:0,45,572	0/0:19,0:19:51.15:0,51,673	1/1:0,13:13:18.06:285,18,0	0/0:10,0:10:30.06:0,30,383	0/0:50,0:50:99:0,151,2096	1/1:1,17:18:54.18:863,54,0	0/0:30,0:30:90.27:0,90,1224	0/0:20,0:20:57.14:0,57,747	0/0:11,0:11:30.10:0,30,420	0/0:30,0:30:90.27:0,90,1239	0/0:24,0:24:69.23:0,69,958	0/0:22,0:22:63.21:0,63,881	0/0:17,0:17:51.17:0,51,713	1/1:4,22:26:30.24:1009,30,0	1/1:2,19:21:36.42:617,36,0	1/1:0,19:19:54.18:862,54,0	0/0:22,0:22:63.21:0,63,878	0/0:23,0:23:66.20:0,66,905	0/0:48,0:48:99:0,135,1842	0/0:16,0:16:45.13:0,45,610	0/0:15,0:15:45.15:0,45,629	0/0:38,0:38:99:0,105,1446	0/0:11,0:11:33.11:0,33,461	0/0:15,0:15:45.13:0,45,611	0/0:34,0:34:99:0,102,1426	0/0:5,0:5:15.05:0,15,210
chr10	57636721	.	AGGGCGG	A	1048.88	PASS	AB=1.000;AC=21;AF=0.404;AN=52;BaseQRankSum=-0.797;DP=242;FS=29.536;HRun=0;HaplotypeScore=49.9899;InbreedingCoeff=0.7013;MQ=92.93;MQ0=1;MQRankSum=-4.378;QD=12.06;ReadPosRankSum=2.386;VQSLOD=0.2453;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:20.87:0,21,198	./.	0/0:27,0:20:40.65:0,41,676	0/0:15,0:9:20.83:0,21,235	0/0:6,0:6:11.94:0,12,131	0/0:6,0:6:5.99:0,6,50	0/0:12,0:12:18.42:0,18,166	0/0:6,0:6:17.49:0,17,108	1/1:4,1:8:3.01:53,3,0	1/1:4,8:13:9.46:195,9,0	1/1:6,0:7:5.95:70,6,0	0/0:6,0:6:11.98:0,12,112	./.	0/0:9,0:9:15.41:0,15,161	1/1:4,7:11:6.02:135,6,0	0/0:8,0:8:8.97:0,9,75	0/0:13,0:13:20.96:0,21,277	0/0:10,0:10:14.86:0,15,121	1/1:13,0:15:24.01:303,24,0	1/1:2,1:3:3.01:56,3,0	0/0:4,8:12:0:0,0,0	0/0:5,0:5:5.96:0,6,45	0/1:2,0:2:0:0,0,0	0/0:7,0:7:8.88:0,9,59	1/1:4,1:6:2.79:26,3,0	1/1:16,1:18:29.99:330,30,0	1/1:3,0:3:3:25,3,0	1/1:1,0:1:3:26,3,0
chr10	57636994	.	CCCA	C	273.24	PASS	AB=0.960;AC=14;AF=0.250;AN=56;BaseQRankSum=2.757;DP=386;FS=4.470;HRun=0;HaplotypeScore=80.4005;InbreedingCoeff=0.1073;MQ=74.24;MQ0=2;MQRankSum=-3.261;QD=1.94;ReadPosRankSum=4.029;VQSLOD=0.9773;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:24,3:27:99:104,0,124	0/0:2,0:2:3:0,3,25	0/0:15,0:11:3.29:0,3,186	0/0:12,0:9:6.10:0,6,92	0/1:5,1:6:39.61:40,0,58	0/0:9,0:9:8.99:0,9,74	0/0:19,0:19:23.99:0,24,236	0/1:11,0:11:30.88:35,0,31	0/1:27,0:27:10.34:10,0,90	0/0:14,0:14:0.23:0,0,79	0/0:7,0:7:7.66:0,8,38	0/0:14,0:14:12.01:0,12,109	0/0:13,0:13:8.97:0,9,71	0/0:12,0:12:5.66:0,6,59	0/0:19,0:19:19.77:0,20,124	0/0:10,0:10:13.53:0,14,102	0/1:34,0:34:42.12:161,0,42	0/0:16,0:14:25.90:0,26,220	0/1:16,0:16:0.04:0,0,102	1/1:9,0:9:1.05:7,1,0	0/0:20,0:20:22.26:0,22,105	1/1:5,0:5:2.91:20,3,0	0/0:2,0:2:5.52:0,6,27	0/0:27,0:26:23.20:0,23,262	1/1:5,0:5:3.86:26,4,0	0/0:18,0:18:9.55:0,10,132	0/0:16,0:16:6.75:0,7,56	1/1:1,0:1:0.89:2,1,0
chr10	57637376	.	T	TA	3019.89	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-4.673;DP=666;FS=3.589;HRun=0;HaplotypeScore=71.6809;InbreedingCoeff=0.9952;MQ=87.44;MQ0=0;MQRankSum=-1.732;QD=40.81;ReadPosRankSum=-0.265;VQSLOD=4.1077;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,48:51:99:2088,132,0	0/0:9,0:9:24.07:0,24,315	0/0:27,0:27:78.23:0,78,1067	0/0:24,0:24:68.97:0,69,848	1/1:0,23:23:66.23:1054,66,0	0/0:26,0:26:78.26:0,78,1090	0/0:21,0:21:63.18:0,63,847	0/0:21,0:21:63.18:0,63,855	0/0:30,0:30:84.27:0,84,1157	0/0:32,0:32:96.31:0,96,1328	0/0:9,0:9:21.05:0,21,275	0/0:26,0:26:75.24:0,75,1031	0/0:18,0:18:54.15:0,54,719	0/0:32,0:32:90.29:0,90,1241	0/0:26,0:26:66.22:0,66,920	0/0:28,0:28:81.26:0,81,1113	0/0:28,0:28:66.20:0,66,901	0/0:24,0:24:63.20:0,63,861	0/0:21,0:21:63.15:0,63,825	0/0:9,0:9:27.09:0,27,377	0/0:43,0:43:99:0,120,1650	0/0:19,0:19:54.17:0,54,733	0/0:12,0:12:36.10:0,36,483	0/0:25,0:25:75.23:0,75,1015	0/0:16,0:16:42.13:0,42,571	0/0:33,0:33:99:0,99,1384	0/0:25,0:25:63.21:0,63,873	0/0:8,0:8:24.05:0,24,315
chr10	57637461	.	T	TC	7683.71	PASS	AC=32;AF=0.593;AN=54;BaseQRankSum=5.330;DP=522;FS=10.124;HRun=2;HaplotypeScore=129.5322;InbreedingCoeff=0.9768;MQ=83.84;MQ0=0;MQRankSum=-15.208;QD=28.89;ReadPosRankSum=-1.098;VQSLOD=3.0699;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,28:32:69.19:866,69,0	1/1:0,2:2:6.02:71,6,0	0/0:21,0:20:38.07:0,38,547	0/0:31,0:31:84.14:0,84,995	1/1:2,17:19:39.07:433,39,0	0/0:16,0:16:48.14:0,48,583	0/0:24,0:24:66.19:0,66,805	1/1:3,22:25:66.15:915,66,0	1/1:1,21:22:58.74:775,59,0	1/1:2,15:17:42.54:557,43,0	1/1:1,4:5:11.87:126,12,0	0/0:30,0:30:81.25:0,81,1004	0/0:23,0:23:63.20:0,63,780	0/0:26,0:26:69.22:0,69,854	1/1:2,24:26:60.18:785,60,0	0/0:24,0:24:55.23:0,55,804	1/1:1,17:18:27.09:379,27,0	1/1:0,13:13:21.07:299,21,0	1/1:0,17:17:45.15:633,45,0	1/1:0,7:7:21.05:241,21,0	1/1:9,11:20:20.86:221,21,0	0/0:19,0:19:54.17:0,54,659	0/0:12,0:12:33.09:0,33,397	0/0:30,0:30:84.25:0,84,1029	1/1:0,7:7:18.05:206,18,0	1/1:2,19:21:57.10:760,57,0	1/1:1,14:15:30.10:415,30,0	./.
chr10	57637467	.	A	AAGGGGAAGCTGGCAAT	46525.10	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=16.463;DP=604;FS=10.337;HRun=0;HaplotypeScore=303.2193;InbreedingCoeff=0.9579;MQ=76.21;MQ0=0;MQRankSum=-18.917;QD=134.86;ReadPosRankSum=-2.593;VQSLOD=3.4178;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:38,7:45:99:5177,105,0	1/1:2,1:3:6.02:421,6,0	0/0:20,0:19:53.18:0,53,1667	0/0:35,0:35:89.92:0,90,3231	1/1:21,2:23:51.17:1964,51,0	0/0:17,0:17:48.16:0,48,2048	0/0:25,0:25:75.26:0,75,3103	1/1:35,0:35:90.26:4009,90,0	1/1:16,11:27:78.27:5088,78,0	1/1:12,6:18:39.13:2639,39,0	1/1:6,1:7:15.05:834,15,0	0/0:30,0:30:84.29:0,84,3605	0/0:24,0:24:66.22:0,66,2862	0/0:24,0:24:72.23:0,72,3117	1/1:21,13:34:96.33:6098,96,0	0/0:22,0:22:60.21:0,60,2701	1/1:16,4:20:42.14:2567,42,0	1/1:13,2:15:30.09:1695,30,0	1/1:21,5:26:72.24:3536,72,0	1/1:10,2:12:33.11:1463,33,0	1/1:25,4:29:60.20:2880,60,0	0/0:21,0:21:54.18:0,54,2093	0/0:11,0:11:33.11:0,33,1403	0/0:30,0:30:84.29:0,84,3672	1/1:8,2:10:30.10:1565,30,0	1/1:11,9:20:60.16:3451,60,0	1/1:15,5:20:48.16:2905,48,0	1/1:1,0:1:3.01:235,3,0
chr10	57637715	.	GGGAGGGAGGGAGGGAGGGA	G	1087.33	PASS	AC=10;AF=0.333;AN=30;BaseQRankSum=1.793;DP=149;FS=28.879;HRun=0;HaplotypeScore=70.3624;InbreedingCoeff=0.6846;MQ=58.94;MQ0=18;MQRankSum=-2.506;QD=28.61;ReadPosRankSum=0.248;VQSLOD=0.1638;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:3,16:18:5.51:171,6,0	./.	0/0:29,0:10:22.44:0,22,326	0/0:44,0:14:28.64:0,29,376	1/1:4,0:7:15.05:404,15,0	0/0:3,0:4:8.39:0,8,104	0/0:5,0:5:12.04:0,12,339	./.	./.	./.	1/1:0,0:1:3.01:61,3,0	0/0:3,0:3:9.03:0,9,200	0/0:3,0:3:9.03:0,9,232	0/0:2,0:2:6.02:0,6,272	./.	1/1:2,8:9:9.03:459,9,0	./.	./.	./.	./.	./.	0/0:5,0:5:10.57:0,11,202	0/0:4,0:4:6.44:0,6,53	0/0:6,0:5:6.02:0,6,192	./.	./.	./.	1/1:0,0:1:3.01:115,3,0
chr10	57637733	.	GA	G	716.52	PASS	AC=28;AF=0.583;AN=48;BaseQRankSum=4.391;DP=127;FS=13.991;HRun=1;HaplotypeScore=23.9096;InbreedingCoeff=0.6271;MQ=55.85;MQ0=13;MQRankSum=-4.349;QD=13.27;ReadPosRankSum=3.302;VQSLOD=0.6108;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:17:2.84:14,3,0	1/1:1,2:3:6.02:83,6,0	0/0:11,0:5:7.40:0,7,89	0/0:24,0:10:11.22:0,11,95	1/1:1,3:3:9.03:125,9,0	0/0:5,0:4:12.03:0,12,154	0/0:5,0:5:12.01:0,12,141	1/1:4,2:2:6.02:84,6,0	1/1:1,0:1:3.01:34,3,0	1/1:0,2:2:6.02:83,6,0	1/1:0,3:3:6.02:83,6,0	./.	0/0:4,0:4:9.02:0,9,109	0/0:6,0:6:15.03:0,15,193	1/1:0,1:1:2.97:20,3,0	1/1:9,0:8:8.45:66,8,0	1/1:0,1:1:3.01:42,3,0	./.	./.	1/1:0,2:2:6.02:83,6,0	./.	0/0:6,0:6:18.04:0,18,221	0/0:4,0:4:11.99:0,12,139	0/0:5,0:4:9.01:0,9,111	0/0:1,0:1:0.47:0,0,1	1/1:0,1:1:3.01:42,3,0	1/1:0,2:2:6.02:83,6,0	1/1:0,1:1:3.01:40,3,0
chr10	57638616	.	T	TACACACACAC	2275.65	PASS	AB=1.000;AC=25;AF=0.595;AN=42;BaseQRankSum=0.566;DP=547;FS=9.698;HRun=0;HaplotypeScore=157.3678;InbreedingCoeff=0.7020;MQ=66.91;MQ0=11;MQRankSum=-3.617;QD=9.81;ReadPosRankSum=0.996;VQSLOD=2.2259;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:22:12.04:377,12,0	1/1:7,0:7:3.01:62,3,0	./.	0/1:41,0:23:21.48:21,0,77	1/1:10,0:10:6:141,6,0	0/0:19,0:17:27.04:0,27,539	0/0:35,0:36:64.10:0,64,1524	./.	./.	1/1:25,0:25:11.96:99,12,0	./.	0/0:18,0:18:21.07:0,21,616	0/0:25,0:26:33.52:0,34,829	0/0:22,0:22:37.32:0,37,859	1/1:17,0:19:6.02:261,6,0	1/1:10,7:17:9.03:447,9,0	1/1:9,0:8:6.02:180,6,0	./.	1/1:12,0:11:9.03:238,9,0	./.	1/1:27,0:22:5.97:149,6,0	0/0:34,0:34:20.87:0,21,559	0/0:18,0:20:34.92:0,35,908	0/0:51,0:50:99:0,99,2489	1/1:10,0:10:9.03:190,9,0	1/1:22,0:22:8.39:149,8,0	1/1:7,0:8:2.20:129,2,0	./.
chr10	57638693	.	CCACACACA	C	1709.68	PASS	AB=0.862;AC=15;AF=0.268;AN=56;BaseQRankSum=5.466;DP=597;FS=10.875;HRun=0;HaplotypeScore=143.1689;InbreedingCoeff=-0.1200;MQ=49.70;MQ0=17;MQRankSum=-2.882;QD=7.50;ReadPosRankSum=1.893;VQSLOD=2.1706;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:27:2.69:0,3,59	0/1:8,0:10:32.34:32,0,127	0/0:40,0:7:3.01:0,3,63	0/0:41,0:5:5.93:0,6,108	0/0:7,0:19:7.69:0,8,142	0/0:17,0:21:15.05:0,15,445	0/0:32,0:30:35.79:0,36,1370	0/1:12,0:11:17.64:18,0,116	1/1:9,2:10:5.98:152,6,0	0/1:14,3:15:99:231,0,234	0/1:16,4:20:99:218,0,186	0/0:15,0:15:21.05:0,21,468	0/0:20,0:21:30.10:0,30,1058	0/0:19,0:16:12.04:0,12,315	0/1:16,5:21:99:409,0,133	0/0:13,0:14:24.08:0,24,761	0/1:12,0:14:7.73:8,0,165	0/0:22,0:20:31.64:0,32,882	0/1:6,3:9:97.05:97,0,146	1/1:14,1:13:3.01:77,3,0	0/1:38,0:32:86.63:87,0,280	0/0:20,0:19:15.05:0,15,412	0/0:19,0:19:30.10:0,30,1028	0/0:38,0:38:45.10:0,45,1203	0/1:18,3:21:99:167,0,165	0/1:19,14:28:99:342,0,473	0/0:19,0:19:27.09:0,27,598	0/1:6,0:6:28.85:29,0,48
chr10	57638696	.	C	CAG	1100.91	PASS	AB=0.976;AC=19;AF=0.339;AN=56;BaseQRankSum=2.766;DP=660;FS=4.299;HRun=0;HaplotypeScore=171.8837;InbreedingCoeff=0.0242;MQ=49.61;MQ0=18;MQRankSum=-3.798;QD=3.77;ReadPosRankSum=4.021;VQSLOD=2.3825;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:0.53:0,1,20	0/1:12,0:11:6.54:77,0,7	0/0:37,0:6:4.09:0,4,66	0/0:44,0:8:14.84:0,15,139	0/0:24,0:24:1.13:0,1,35	0/0:22,0:22:32.55:0,33,313	0/0:34,0:32:55.88:0,56,613	1/1:14,0:12:5.38:174,5,0	0/1:14,0:12:1.65:42,0,2	0/1:17,0:15:33.03:124,0,33	0/1:22,0:22:17.44:82,0,17	0/0:19,0:19:41.82:0,42,365	0/0:26,0:26:62.77:0,63,619	0/0:17,0:14:28.21:0,28,242	0/1:25,0:25:18.71:72,0,19	0/0:20,0:20:9.99:0,10,164	0/1:14,0:14:5.44:5,0,42	0/1:14,8:20:99:170,0,100	0/1:9,0:9:18.75:19,0,32	1/1:17,0:15:3.56:24,4,0	0/1:41,0:35:15.52:145,0,16	0/0:25,0:24:35.87:0,36,322	0/0:19,0:19:47.89:0,48,385	0/0:52,0:49:92.77:0,93,939	1/1:23,0:23:5.72:41,6,0	0/1:36,0:31:31.14:210,0,31	0/1:20,0:20:5.60:6,0,49	1/1:6,0:6:1.59:69,2,0
chr10	57638780	.	C	CAG	818.31	PASS	AB=0.984;AC=20;AF=0.357;AN=56;BaseQRankSum=6.542;DP=438;FS=3.383;HRun=0;HaplotypeScore=61.5882;InbreedingCoeff=0.2271;MQ=42.93;MQ0=77;MQRankSum=-3.633;QD=4.84;ReadPosRankSum=0.975;VQSLOD=2.1338;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:6:2.49:0,2,23	0/0:4,0:3:2.88:0,3,15	0/0:43,0:1:3.01:0,3,46	0/1:48,0:2:0.87:1,0,15	0/0:4,0:3:5.92:0,6,48	0/0:20,0:16:30.06:0,30,392	0/0:40,0:28:51.13:0,51,713	0/1:11,0:7:26.81:27,0,51	0/1:7,0:5:17.60:54,0,18	0/1:10,0:6:20.52:21,0,54	0/1:8,0:7:13.08:13,0,53	0/0:21,0:21:22.19:0,22,530	0/0:30,0:29:65.88:0,66,813	0/0:22,0:17:45.10:0,45,620	1/1:6,0:4:8.94:68,9,0	0/0:4,0:4:11.98:0,12,98	1/1:10,0:8:3.01:32,3,0	0/0:3,0:2:5.94:0,6,41	1/1:9,0:4:11.96:103,12,0	1/1:14,1:14:15.03:181,15,0	0/1:23,4:18:35.53:249,0,36	0/0:21,0:15:33:0,33,353	0/0:9,0:6:11.39:0,11,123	0/0:40,0:36:99:0,102,1376	0/1:5,0:5:16.19:49,0,16	0/1:7,0:6:21.11:60,0,21	1/1:5,0:4:9.02:100,9,0	1/1:1,0:1:3.01:32,3,0
chr10	57638913	.	C	CCA	1636.27	PASS	AB=0.918;AC=30;AF=0.600;AN=50;BaseQRankSum=7.302;DP=483;FS=9.606;HRun=0;HaplotypeScore=87.6022;InbreedingCoeff=0.5358;MQ=41.46;MQ0=52;MQRankSum=-2.393;QD=6.39;ReadPosRankSum=-0.355;VQSLOD=2.2912;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:25,3:23:9.25:232,0,9	1/1:13,0:13:12.02:120,12,0	0/0:33,0:2:3.01:0,3,33	./.	0/1:15,2:16:21.27:92,0,21	0/0:21,0:21:14.87:0,15,146	0/1:32,1:31:0.04:0,0,386	1/1:20,0:14:3.01:37,3,0	1/1:1,0:1:3:26,3,0	1/1:13,0:12:15.80:109,16,0	./.	0/0:11,0:11:24.04:0,24,247	0/0:23,0:21:19.62:0,20,273	0/0:12,0:9:6.02:0,6,66	1/1:6,0:6:2.74:12,3,0	1/1:7,7:14:33.06:451,33,0	1/1:19,0:19:23.07:190,23,0	0/1:17,0:16:0.86:85,0,1	1/1:11,0:8:5.99:58,6,0	1/1:7,0:7:8.86:73,9,0	1/1:21,0:17:17.92:137,18,0	0/0:18,0:17:9.02:0,9,98	0/0:15,0:14:11.88:0,12,132	0/0:27,0:33:41.26:0,41,369	1/1:13,0:12:15.73:101,16,0	1/1:12,0:11:6.01:60,6,0	1/1:8,0:7:3:25,3,0	./.
chr10	57638950	.	C	CACACACACAT	6818.53	PASS	AB=0.773;AC=28;AF=0.500;AN=56;BaseQRankSum=-3.663;DP=721;FS=18.941;HRun=0;HaplotypeScore=227.5969;InbreedingCoeff=0.7871;MQ=65.09;MQ0=15;MQRankSum=-5.956;QD=20.17;ReadPosRankSum=-3.082;VQSLOD=1.9493;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:40:19.38:0,19,504	0/1:2,0:12:21.98:65,0,22	0/0:40,0:25:67.80:0,68,695	0/0:35,0:27:63.33:0,63,586	0/0:27,0:27:22.58:0,23,332	0/0:22,0:22:6.76:0,7,545	0/0:33,0:31:86.91:0,87,1330	1/1:31,0:31:86.79:729,87,0	1/1:1,11:12:3.01:160,3,0	1/1:29,0:28:73.72:1110,74,0	1/1:16,0:16:26.98:276,27,0	0/0:28,0:28:77.67:0,78,1009	0/0:28,0:26:70.65:0,71,1034	0/0:23,0:22:59.74:0,60,620	1/1:3,8:17:9.03:390,9,0	0/0:18,0:19:32.18:0,32,354	1/1:4,0:36:3.53:127,4,0	0/1:38,0:35:99:253,0,339	1/1:19,0:18:41.54:485,42,0	1/1:14,0:14:23.92:279,24,0	1/1:32,0:30:41.95:685,42,0	0/0:25,0:25:49.78:0,50,568	0/0:25,0:24:33.35:0,33,634	0/0:35,0:34:87.05:0,87,1405	1/1:20,0:18:35.97:570,36,0	1/1:8,25:39:71.88:1229,72,0	1/1:15,0:14:25.82:361,26,0	1/1:6,0:5:14.80:99,15,0
chr10	57638968	.	GCAC	G	3634.62	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=4.969;DP=621;FS=10.483;HRun=0;HaplotypeScore=113.4372;InbreedingCoeff=0.9843;MQ=83.22;MQ0=0;MQRankSum=-5.394;QD=39.94;ReadPosRankSum=4.127;VQSLOD=4.7328;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,31:30:84.29:1397,84,0	0/0:9,0:9:15.52:0,16,340	0/0:38,0:33:90.27:0,90,1800	0/0:36,0:35:89.61:0,90,1885	1/1:0,16:16:42.14:693,42,0	0/0:16,0:16:36.12:0,36,797	0/0:23,0:22:63.20:0,63,1350	0/0:28,0:28:81.27:0,81,1730	0/0:18,0:18:27.05:0,27,563	0/0:21,0:21:63.22:0,63,1418	0/0:14,0:14:42.14:0,42,944	0/0:27,0:27:69.17:0,69,1507	0/0:22,0:22:60.21:0,60,1356	0/0:23,0:23:60.21:0,60,1356	0/0:14,0:14:12.04:0,12,271	1/1:2,13:15:33.11:547,33,0	0/0:29,0:29:24.48:0,24,449	1/1:1,27:27:60.21:998,60,0	0/0:16,0:16:42.14:0,42,949	0/0:14,0:14:36.12:0,36,814	0/0:27,0:26:66.23:0,66,1493	0/0:23,0:23:60.21:0,60,1340	0/0:25,0:25:72.22:0,72,1544	0/0:33,0:33:93.32:0,93,2082	0/0:20,0:20:54.19:0,54,1179	0/0:36,0:36:99:0,99,2187	0/0:11,0:11:33.11:0,33,737	0/0:6,0:6:18.06:0,18,406
chr10	57639215	.	CTT	C	6699.21	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=7.865;DP=452;FS=8.441;HRun=13;HaplotypeScore=88.6918;InbreedingCoeff=0.9741;MQ=70.67;MQ0=3;MQRankSum=-3.906;QD=21.13;ReadPosRankSum=2.860;VQSLOD=4.1054;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,24:29:81.09:775,81,0	1/1:1,4:5:12.01:116,12,0	0/0:19,0:14:17.57:0,18,137	0/0:21,0:12:9.51:0,10,107	1/1:3,15:19:41.76:390,42,0	0/0:21,0:22:53.83:0,54,713	0/0:10,0:10:18.05:0,18,241	1/1:7,18:25:54.04:524,54,0	1/1:4,6:10:23.98:222,24,0	1/1:5,16:21:48.02:465,48,0	1/1:4,10:15:26.93:304,27,0	0/0:7,0:8:23.57:0,24,312	0/0:9,0:10:23.56:0,24,296	0/0:13,0:13:33.11:0,33,470	1/1:4,10:14:26.97:262,27,0	1/1:4,11:15:36.01:343,36,0	1/1:8,27:36:80.79:768,81,0	1/1:4,11:17:16.26:318,16,0	1/1:4,8:16:17.35:239,17,0	1/1:3,15:18:48.01:456,48,0	1/1:3,5:8:15:145,15,0	0/0:11,0:12:29.54:0,30,375	0/0:13,0:13:36.11:0,36,501	0/0:6,0:6:17.55:0,18,226	1/1:7,13:20:42.02:407,42,0	1/1:6,17:23:51.03:494,51,0	1/1:4,11:15:36.01:342,36,0	1/1:7,4:11:14.73:128,15,0
chr10	57639277	.	AGT	A	12692.89	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=16.133;DP=523;FS=7.609;HRun=0;HaplotypeScore=102.6563;InbreedingCoeff=0.9921;MQ=65.63;MQ0=0;MQRankSum=-7.290;QD=35.36;ReadPosRankSum=0.908;VQSLOD=6.8139;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,22:24:66.22:878,66,0	1/1:0,11:12:36.12:479,36,0	0/0:11,0:11:30.10:0,30,497	0/0:8,0:8:10.04:0,10,301	1/1:1,32:32:90.30:1197,90,0	0/0:14,0:14:39.12:0,39,644	0/0:22,0:22:66.23:0,66,1143	1/1:2,31:33:93.28:1206,93,0	1/1:1,10:11:33.10:424,33,0	1/1:2,18:20:51.15:664,51,0	1/1:3,18:21:51.17:679,51,0	0/0:19,0:19:57.20:0,57,977	0/0:18,0:18:51.17:0,51,882	0/0:17,0:17:51.17:0,51,879	1/1:2,26:28:75.25:998,75,0	1/1:1,18:19:54.18:719,54,0	1/1:4,20:24:54.13:699,54,0	1/1:1,11:12:30.10:399,30,0	1/1:2,16:17:45.15:598,45,0	1/1:1,22:23:63.21:838,63,0	1/1:0,8:8:21.07:280,21,0	0/0:19,0:19:54.18:0,54,934	0/0:15,0:15:45.15:0,45,758	0/0:21,0:21:63.22:0,63,1085	1/1:0,19:19:48.16:639,48,0	1/1:2,20:22:60.20:799,60,0	1/1:1,18:19:57.19:758,57,0	1/1:0,13:13:33.11:439,33,0
chr10	57640228	.	G	GCACAC	3135.01	PASS	AB=0.810;AC=18;AF=0.321;AN=56;BaseQRankSum=8.515;DP=653;FS=12.667;HRun=0;HaplotypeScore=171.8813;InbreedingCoeff=-0.3552;MQ=57.94;MQ0=10;MQRankSum=-7.201;QD=9.33;ReadPosRankSum=0.523;VQSLOD=2.1764;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:29:99:126,0,405	0/1:3,0:8:77.37:84,0,77	0/0:58,0:19:51.14:0,51,657	0/0:67,0:23:62.52:0,63,787	0/1:23,0:20:44.63:45,0,186	0/0:14,0:24:54.66:0,55,572	0/0:12,0:29:32.81:0,33,540	0/1:24,0:24:46.64:47,0,773	0/1:7,0:14:26.72:253,0,27	0/1:5,0:11:99:209,0,100	1/1:1,0:3:3.01:49,3,0	0/0:7,0:20:44.10:0,44,378	0/0:24,0:24:66.22:0,66,1356	0/0:21,0:21:63.20:0,63,1206	0/1:16,1:31:99:438,0,229	0/1:26,0:27:99:290,0,200	0/1:15,0:24:99:240,0,244	0/1:21,0:22:99:266,0,378	0/1:17,0:18:99:171,0,408	0/1:14,0:15:99:201,0,144	0/1:14,0:26:69.88:70,0,259	0/0:11,0:25:25.79:0,26,281	0/0:6,0:19:32.25:0,32,194	0/0:13,0:24:31.22:0,31,612	0/1:9,0:12:69.49:87,0,69	0/1:15,1:20:99:376,0,306	0/1:12,0:25:99:347,0,200	0/0:4,0:4:9.02:0,9,108
chr10	57640504	.	C	CCT	75.88	PASS	AB=1.000;AC=16;AF=0.320;AN=50;BaseQRankSum=2.476;DP=623;FS=9.187;HRun=0;HaplotypeScore=98.3059;InbreedingCoeff=0.4147;MQ=57.21;MQ0=38;MQRankSum=-3.057;QD=0.46;ReadPosRankSum=-1.444;VQSLOD=0.7732;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:26:9.49:0,9,50	1/1:6,0:6:0.89:2,1,0	0/0:71,0:20:0.39:0,0,16	0/0:84,0:22:4.98:0,5,34	./.	0/0:13,0:13:6:0,6,58	0/0:29,0:31:41.35:0,41,388	0/1:38,0:35:17.20:18,0,17	0/0:21,0:22:6.20:0,6,55	0/0:12,0:11:2.39:0,2,17	./.	0/0:16,0:18:23.89:0,24,244	0/0:11,0:11:12.03:0,12,131	1/1:12,4:18:2.93:46,3,0	0/0:18,0:17:5.36:0,5,22	0/0:20,0:20:8.39:0,8,39	0/0:16,0:16:2.63:0,3,13	1/1:19,0:19:5.11:95,5,0	1/1:19,0:18:4.16:22,4,0	./.	1/1:34,0:33:1.77:4,2,0	0/0:18,0:18:17.99:0,18,178	0/0:13,0:13:11.93:0,12,108	0/0:26,0:28:32.92:0,33,352	0/1:6,0:5:0:0,0,0	1/1:16,0:14:4.02:9,4,0	0/0:16,0:15:0.41:0,0,8	1/1:10,0:9:0.89:2,1,0
chr10	57640787	.	T	TA	9888.12	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=13.914;DP=524;FS=23.028;HRun=6;HaplotypeScore=88.6062;InbreedingCoeff=0.9981;MQ=72.61;MQ0=0;MQRankSum=-1.960;QD=31.19;ReadPosRankSum=-0.703;VQSLOD=2.8764;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,105,1069	1/1:2,9:11:27.09:340,27,0	0/0:20,0:19:36.03:0,36,345	0/0:9,0:9:21.04:0,21,205	0/0:18,0:18:51.11:0,51,520	0/0:21,0:21:54.12:0,54,550	0/0:12,0:12:30.04:0,30,298	1/1:6,31:37:90.24:1111,90,0	1/1:1,18:19:45.14:566,45,0	1/1:1,32:33:87.21:1037,87,0	1/1:1,10:11:27.09:335,27,0	0/0:16,0:16:48.11:0,48,490	0/0:11,0:11:24.05:0,24,245	0/0:18,0:18:51.10:0,51,513	1/1:1,15:16:39.12:491,39,0	1/1:2,16:18:45.14:566,45,0	1/1:0,21:21:63.20:792,63,0	1/1:3,15:18:42.13:528,42,0	1/1:8,18:26:54.17:679,54,0	1/1:4,16:20:45.14:566,45,0	1/1:0,24:24:69.22:868,69,0	0/0:15,0:15:45.10:0,45,459	0/0:12,0:12:36.07:0,36,359	0/0:16,0:16:36.08:0,36,367	1/1:0,16:16:45.14:566,45,0	1/1:3,19:22:57.15:687,57,0	1/1:5,13:18:39.12:491,39,0	1/1:0,7:7:21.07:264,21,0
chr10	57640881	.	ACC	A	4257.43	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=8.844;DP=438;FS=8.068;HRun=2;HaplotypeScore=94.0000;InbreedingCoeff=0.9802;MQ=66.13;MQ0=14;MQRankSum=-4.129;QD=18.59;ReadPosRankSum=1.732;VQSLOD=2.2191;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:38.78:0,39,387	1/1:11,0:11:29.32:212,29,0	0/0:36,0:14:34.72:0,35,309	0/0:51,0:20:11.71:0,12,196	0/0:12,0:11:20.96:0,21,171	0/0:15,0:15:23.96:0,24,289	0/0:16,0:16:25.58:0,26,389	1/1:23,0:23:59.79:494,60,0	1/1:10,1:11:23.89:188,24,0	1/1:13,1:13:37.91:296,38,0	1/1:11,0:11:26.88:211,27,0	0/0:7,0:7:18:0,18,164	0/0:8,0:8:20.65:0,21,146	0/0:13,0:12:26.96:0,27,288	1/1:23,5:27:70.06:516,70,0	1/1:11,0:11:29.81:230,30,0	1/1:15,0:14:22.81:249,23,0	1/1:6,0:7:14.90:110,15,0	1/1:22,0:22:64.98:495,65,0	1/1:8,0:8:17.83:135,18,0	1/1:17,0:16:20.93:165,21,0	0/0:9,0:9:14.94:0,15,118	0/0:8,0:7:17.90:0,18,166	0/0:17,0:17:32.97:0,33,328	1/1:7,3:10:17.24:129,17,0	1/1:20,0:20:54.91:396,55,0	1/1:12,2:13:38.85:317,39,0	1/1:4,3:6:14.92:115,15,0
chr10	57640917	.	C	CT	350.89	PASS	AB=0.963;AC=13;AF=0.232;AN=56;BaseQRankSum=4.395;DP=353;FS=5.910;HRun=1;HaplotypeScore=93.8480;InbreedingCoeff=0.2149;MQ=40.78;MQ0=68;MQRankSum=-3.128;QD=2.62;ReadPosRankSum=1.515;VQSLOD=-0.4040;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:12.02:0,12,137	1/1:3,0:2:2.04:6,2,0	0/0:10,0:3:8.04:0,8,60	0/0:25,0:5:9.02:0,9,101	0/0:9,0:7:2.99:0,3,23	0/0:13,0:11:12.04:0,12,154	0/0:14,0:13:23.18:0,23,248	0/0:22,0:18:37.49:0,37,397	0/1:7,0:5:0.55:40,0,1	0/1:10,0:8:21.45:21,0,105	0/0:11,0:9:6.89:0,7,64	0/0:12,0:9:11.47:0,11,121	0/0:4,0:3:6.01:0,6,66	0/0:10,0:7:11.88:0,12,153	1/1:22,2:19:12.40:198,12,0	0/0:11,0:7:6.49:0,6,75	0/1:9,0:6:7.88:8,0,135	0/0:10,0:5:9.03:0,9,112	0/1:13,0:10:19.01:19,0,229	0/0:9,1:9:1.06:0,1,3	0/1:20,0:17:0.30:0,0,0	0/0:4,0:4:8.37:0,8,70	0/0:10,0:7:5.88:0,6,76	0/0:17,0:12:11.66:0,12,154	1/1:15,0:13:5.60:27,6,0	0/1:19,4:20:99:160,0,367	0/1:7,1:6:12.94:13,0,30	0/0:13,0:2:6.02:0,6,76
chr10	57640922	.	TCTCTCTCCCTCC	T	2834.41	PASS	AB=1.000;AC=32;AF=0.571;AN=56;BaseQRankSum=6.565;DP=355;FS=30.163;HRun=0;HaplotypeScore=117.3584;InbreedingCoeff=0.6020;MQ=42.06;MQ0=68;MQRankSum=-4.740;QD=11.43;ReadPosRankSum=0.361;VQSLOD=0.3959;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:16.58:0,17,388	0/1:4,0:3:0.48:36,0,0	0/0:10,0:4:10.66:0,11,74	0/1:21,0:6:18.36:18,0,39	1/1:6,0:4:0.89:2,1,0	0/0:12,0:10:17.89:0,18,440	0/0:15,0:14:31:0,31,1016	1/1:29,0:25:53.40:495,53,0	1/1:7,0:5:14.84:174,15,0	1/1:7,0:6:14.96:139,15,0	1/1:9,0:7:10.64:76,11,0	0/0:11,0:8:16.06:0,16,251	0/0:3,0:2:6.02:0,6,219	0/0:11,0:8:15.60:0,16,353	1/1:22,2:18:9.82:517,10,0	0/1:14,0:9:38.09:38,0,73	0/1:12,0:7:42.72:84,0,43	1/1:10,0:5:5.91:47,6,0	1/1:14,0:10:16.73:138,17,0	1/1:11,0:10:23.51:145,24,0	1/1:19,0:16:10.95:63,11,0	0/0:3,0:3:3.01:0,3,58	0/0:11,0:8:10.37:0,10,151	0/0:16,0:11:12.39:0,12,298	1/1:12,1:11:19.24:227,19,0	1/1:25,0:22:63.74:535,64,0	1/1:7,2:6:14.96:251,15,0	1/1:13,0:2:5.98:47,6,0
chr10	57640932	.	TC	T	1482.20	PASS	AB=0.980;AC=36;AF=0.643;AN=56;BaseQRankSum=3.668;DP=362;FS=7.204;HRun=12;HaplotypeScore=93.6870;InbreedingCoeff=0.5459;MQ=46.17;MQ0=68;MQRankSum=-3.903;QD=5.61;ReadPosRankSum=2.609;VQSLOD=2.1265;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:3.47:0,3,29	1/1:1,3:3:3.46:24,3,0	0/0:15,0:5:14.77:0,15,103	0/0:24,0:7:3.49:0,3,46	0/0:5,0:4:0:0,0,0	0/0:11,0:9:4.24:0,4,28	0/1:23,0:24:1.49:1,0,122	1/1:7,16:19:44.80:338,45,0	1/1:3,7:5:9.47:52,9,0	1/1:4,4:7:11.95:90,12,0	1/1:4,6:8:4.86:26,5,0	0/0:10,0:6:3.64:0,4,21	0/1:5,0:4:0.06:0,0,1	1/1:11,0:8:1.27:17,1,0	1/1:20,6:19:20.35:99,20,0	1/1:9,4:9:13.32:73,13,0	1/1:10,1:7:8.93:69,9,0	1/1:8,3:5:5.97:45,6,0	1/1:4,9:7:11.89:85,12,0	1/1:4,8:11:18.57:114,19,0	1/1:8,11:15:6.63:38,7,0	0/0:4,0:4:0.47:0,0,1	0/0:8,1:6:0:0,0,1	0/0:10,0:6:4.24:0,4,27	1/1:5,9:12:9.72:46,10,0	1/1:9,17:23:55.95:406,56,0	1/1:5,5:6:11.60:63,12,0	1/1:11,2:2:5.98:46,6,0
chr10	57641434	.	G	GA	9957.58	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=17.268;DP=583;FS=9.835;HRun=6;HaplotypeScore=119.2664;InbreedingCoeff=0.9931;MQ=89.46;MQ0=0;MQRankSum=-4.371;QD=30.83;ReadPosRankSum=2.467;VQSLOD=3.5941;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:66.14:0,66,673	1/1:2,6:8:15.05:187,15,0	0/0:25,0:25:46.76:0,47,489	0/0:24,0:24:24.23:0,24,309	0/0:23,0:23:63.13:0,63,637	0/0:23,0:23:63.14:0,63,642	0/0:23,0:23:63.11:0,63,629	1/1:7,14:21:48.09:554,48,0	1/1:4,21:25:66.21:823,66,0	1/1:4,23:27:72.15:865,72,0	1/1:3,13:16:42.09:504,42,0	0/0:13,0:13:33.07:0,33,337	0/0:20,0:20:60.13:0,60,607	0/0:20,0:20:54.12:0,54,550	1/1:3,14:17:42.08:507,42,0	1/1:2,12:14:39.08:470,39,0	1/1:2,35:37:99:1224,99,0	1/1:1,19:20:51.16:638,51,0	1/1:5,20:25:66.14:789,66,0	1/1:0,19:19:45.14:563,45,0	1/1:3,21:24:60.15:732,60,0	0/0:18,0:18:45.08:0,45,451	0/0:19,0:19:48.11:0,48,489	0/0:28,0:28:78.17:0,78,795	1/1:2,14:16:39.12:488,39,0	1/1:6,11:17:39.08:467,39,0	1/1:3,28:31:81.22:996,81,0	1/1:1,5:6:12.04:150,12,0
chr10	57641909	.	GA	G	388.56	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-0.289;DP=640;FS=4.773;HRun=15;HaplotypeScore=87.0776;InbreedingCoeff=0.7801;MQ=52.73;MQ0=23;MQRankSum=5.332;QD=5.40;ReadPosRankSum=2.622;VQSLOD=2.9236;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:10,25:35:27.02:279,27,0	0/0:11,0:12:18.88:0,19,113	0/0:19,0:9:2.52:0,3,53	0/0:13,0:6:13.26:0,13,65	1/1:13,19:32:28.73:229,29,0	0/0:21,0:23:32.82:0,33,286	0/0:26,0:27:46.33:0,46,381	0/0:32,0:34:53.77:0,54,322	0/0:22,0:22:39.04:0,39,239	0/0:19,0:20:33.14:0,33,201	0/0:13,0:14:18.10:0,18,111	0/0:24,0:27:45.79:0,46,379	0/0:21,0:19:45.27:0,45,368	0/0:22,2:23:14.82:0,15,293	0/0:22,0:21:34.22:0,34,202	0/0:19,0:17:14.82:0,15,99	0/0:20,0:38:26.32:0,26,161	0/0:22,0:21:31.45:0,31,178	0/0:27,0:22:33.95:0,34,225	0/0:11,0:22:10.39:0,10,66	0/0:9,0:7:7.01:0,7,39	0/0:19,0:19:7.13:0,7,158	0/0:23,0:23:36.40:0,36,295	0/0:23,0:23:31.40:0,31,268	0/0:13,0:13:18.81:0,19,118	0/0:21,0:20:19.16:0,19,126	0/0:33,0:33:60.82:0,61,391	0/0:11,0:10:12.09:0,12,71
chr10	57642573	.	GCT	G	16585.51	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=16.758;DP=751;FS=1.491;HRun=0;HaplotypeScore=92.4611;InbreedingCoeff=0.9974;MQ=77.00;MQ0=1;MQRankSum=-0.807;QD=44.95;ReadPosRankSum=1.197;VQSLOD=5.8803;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,151,3010	1/1:0,10:10:30.10:489,30,0	0/0:26,0:26:61.20:0,61,1376	0/0:27,0:27:78.25:0,78,1481	0/0:24,0:24:72.23:0,72,1425	0/0:19,0:19:57.20:0,57,1158	0/0:27,0:27:81.28:0,81,1634	1/1:0,22:22:66.21:1050,66,0	1/1:0,24:24:63.22:1028,63,0	1/1:0,28:28:84.24:1296,84,0	1/1:0,19:19:54.10:847,54,0	0/0:24,0:24:72.25:0,72,1448	0/0:19,0:19:57.20:0,57,1147	0/0:26,0:26:78.25:0,78,1526	1/1:0,34:35:99:1659,102,0	0/0:23,1:24:23.30:0,23,1295	1/1:0,45:45:99:2047,126,0	0/0:22,0:22:66.19:0,66,1301	1/1:0,19:19:57.14:897,57,0	1/1:0,23:23:57.19:928,57,0	1/1:0,60:59:99:2642,163,0	0/0:26,0:26:78.27:0,78,1582	0/0:23,0:23:69.24:0,69,1401	0/0:45,0:45:99:0,132,2627	1/1:0,22:22:54.18:881,54,0	1/1:0,30:30:90.31:1451,90,0	1/1:0,26:26:69.19:1125,69,0	1/1:0,6:6:15.05:245,15,0
chr10	57643228	.	A	AAAAG	9781.26	PASS	AC=34;AF=0.630;AN=54;BaseQRankSum=12.194;DP=809;FS=8.807;HRun=0;HaplotypeScore=213.6211;InbreedingCoeff=0.9567;MQ=50.20;MQ0=14;MQRankSum=-10.239;QD=19.22;ReadPosRankSum=0.595;VQSLOD=3.6681;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,23:31:48.16:1168,48,0	1/1:20,0:20:50.27:398,50,0	0/0:48,0:15:2.03:0,2,160	0/0:54,0:12:9.02:0,9,115	1/1:14,28:39:63.08:1358,63,0	0/0:21,0:21:51.16:0,51,807	0/0:18,0:18:36.09:0,36,512	1/1:43,0:40:57.63:438,58,0	1/1:22,0:22:56.66:567,57,0	1/1:28,0:27:61.93:456,62,0	1/1:37,0:37:80.15:621,80,0	0/0:19,0:19:39.13:0,39,622	0/0:28,0:28:62.95:0,63,1028	0/0:19,0:19:41.61:0,42,652	1/1:33,0:33:65.03:403,65,0	1/1:9,0:20:21.07:367,21,0	1/1:29,0:29:45.13:381,45,0	1/1:9,15:23:24.08:578,24,0	1/1:31,0:29:40.21:272,40,0	1/1:41,0:41:88.87:640,89,0	./.	0/0:25,0:25:54.16:0,54,815	0/0:30,0:30:51.17:0,51,826	0/0:32,0:31:66.22:0,66,1069	1/1:33,0:33:76.76:742,77,0	1/1:38,0:37:85.94:626,86,0	1/1:30,0:30:82.59:651,83,0	1/1:6,0:6:14.94:114,15,0
chr10	57643247	.	A	AG	5432.29	PASS	AB=0.718;AC=14;AF=0.250;AN=56;BaseQRankSum=8.103;DP=755;FS=11.625;HRun=1;HaplotypeScore=192.9783;InbreedingCoeff=-0.3382;MQ=55.99;MQ0=12;MQRankSum=-4.267;QD=14.18;ReadPosRankSum=3.204;VQSLOD=3.3681;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:35:33.65:0,34,326	0/1:13,7:20:99:276,0,298	0/0:36,0:11:26.27:0,26,303	0/0:45,0:17:17.31:0,17,285	0/0:35,0:31:37.68:0,38,364	0/0:24,0:24:72.20:0,72,895	0/0:19,0:19:56.53:0,57,694	0/1:32,8:37:99:228,0,604	0/1:11,10:21:99:303,0,293	0/1:18,12:29:99:778,0,198	0/1:18,20:38:99:800,0,203	0/0:18,0:18:51.16:0,51,649	0/0:25,0:25:75.23:0,75,958	0/0:21,0:21:60.16:0,60,760	0/1:22,5:27:99:165,0,604	0/0:12,0:12:9.32:0,9,83	0/1:17,9:26:99:344,0,335	0/0:20,0:19:15.29:0,15,130	0/1:23,6:27:99:129,0,606	0/1:17,19:36:99:572,0,405	0/1:3,2:5:38.51:67,0,39	0/0:28,0:28:84.22:0,84,1025	0/0:24,0:24:72.17:0,72,865	0/0:29,0:28:84.23:0,84,1074	0/1:16,19:35:99:629,0,394	0/1:20,18:38:99:603,0,485	0/1:20,12:32:99:381,0,508	0/1:2,4:6:55.96:158,0,56
chr10	57643252	.	GGA	G	4682.05	PASS	AB=0.808;AC=13;AF=0.232;AN=56;BaseQRankSum=4.550;DP=746;FS=0.668;HRun=0;HaplotypeScore=207.6026;InbreedingCoeff=-0.3072;MQ=57.57;MQ0=11;MQRankSum=-9.759;QD=12.16;ReadPosRankSum=-0.033;VQSLOD=4.5978;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:87.24:0,87,1256	0/1:11,7:20:99:290,0,258	0/0:32,2:12:20.12:0,20,515	0/0:35,4:18:32.26:0,32,503	0/0:33,0:29:43.58:0,44,1035	0/0:23,0:23:69.22:0,69,1349	0/0:21,0:21:45.53:0,46,1093	0/1:31,6:34:99:379,0,583	0/1:19,3:22:99:295,0,302	0/1:15,6:33:99:222,0,733	0/1:26,7:37:99:232,0,826	0/0:18,0:18:54.19:0,54,1071	0/0:24,0:24:72.25:0,72,1449	0/0:21,0:21:63.17:0,63,1168	0/1:10,17:28:99:618,0,188	0/0:11,0:11:27.07:0,27,318	0/1:20,7:28:99:276,0,428	0/0:19,0:18:36.11:0,36,528	0/1:16,12:26:99:554,0,319	0/1:26,12:39:99:482,0,652	0/0:3,0:3:7.57:0,8,75	0/0:28,0:28:84.27:0,84,1602	0/0:19,0:19:57.20:0,57,1115	0/0:30,0:29:86.81:0,87,1755	0/1:31,2:33:99:312,0,575	0/1:26,11:39:99:484,0,578	0/1:19,13:34:99:511,0,396	0/1:6,0:6:26.73:27,0,123
chr10	57643752	.	C	CT	1690.02	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=-7.282;DP=563;FS=7.506;HRun=12;HaplotypeScore=59.5494;InbreedingCoeff=0.7996;MQ=66.44;MQ0=2;MQRankSum=0.052;QD=14.32;ReadPosRankSum=1.061;VQSLOD=4.0713;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,17:23:39.06:380,39,0	0/0:14,0:14:11.85:0,12,87	0/1:15,0:11:6.04:6,0,51	0/0:12,0:10:5.69:0,6,39	1/1:7,20:27:54.04:516,54,0	0/0:25,0:25:50.69:0,51,372	0/0:15,0:15:35.71:0,36,256	0/0:42,0:42:68.41:0,68,498	0/0:15,0:16:29.79:0,30,219	0/0:20,0:22:51.74:0,52,360	0/0:21,0:21:35.61:0,36,262	0/0:20,0:20:35.75:0,36,262	0/0:13,0:13:23.79:0,24,173	0/0:12,0:12:0.53:0,1,111	0/0:16,0:16:32.78:0,33,241	1/1:10,14:24:30.05:292,30,0	0/0:25,0:24:50.59:0,51,372	1/1:4,24:28:68.98:657,69,0	0/0:31,0:31:59.61:0,60,438	0/0:21,1:22:27.48:0,27,362	0/0:11,0:11:17.84:0,18,130	0/0:8,0:8:17.87:0,18,131	0/0:11,0:12:28.87:0,29,203	0/0:22,0:23:55.70:0,56,397	0/0:22,1:24:30.45:0,30,387	0/0:25,0:25:47.69:0,48,350	0/0:27,0:27:59.62:0,60,438	0/0:8,0:9:22.92:0,23,159
chr10	57645649	.	TCA	T	994.83	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.839;DP=960;FS=3.525;HRun=0;HaplotypeScore=173.3309;InbreedingCoeff=0.8445;MQ=57.91;MQ0=10;MQRankSum=-0.297;QD=23.69;ReadPosRankSum=1.711;VQSLOD=4.3237;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:50:77.87:0,78,1343	0/0:10,0:10:18.06:0,18,292	0/0:50,0:41:99:0,102,1656	0/0:45,0:38:94.48:0,94,1440	0/0:26,0:26:45.07:0,45,780	0/0:25,0:25:69.20:0,69,1129	0/0:36,0:36:99:0,102,1764	0/0:39,0:39:99:0,111,1791	0/0:42,0:42:90.20:0,90,1493	0/0:50,0:50:99:0,119,2232	0/0:17,0:17:39.06:0,39,675	0/0:43,0:43:96.66:0,97,1658	0/0:38,0:38:99:0,114,1909	0/0:30,0:30:84.26:0,84,1386	0/0:44,0:43:87.01:0,87,1474	1/1:5,37:42:80.37:1090,80,0	0/0:18,0:18:32.42:0,32,502	0/0:17,0:17:33:0,33,723	0/0:17,0:17:48.14:0,48,748	0/0:31,0:31:68.95:0,69,1163	0/0:68,0:68:99:0,150,2430	0/0:46,0:46:99:0,118,1974	0/0:32,0:32:78.27:0,78,1343	0/0:35,0:35:71.97:0,72,1209	0/0:27,0:27:43.92:0,44,805	0/0:37,0:37:99:0,99,1660	0/0:37,0:37:90.29:0,90,1500	0/0:7,0:3:3.01:0,3,48
chr10	57645703	.	A	AACACACACACACAC	22312.51	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-1.256;DP=844;FS=2.784;HRun=0;HaplotypeScore=335.2225;InbreedingCoeff=0.9509;MQ=51.43;MQ0=7;MQRankSum=-12.462;QD=42.10;ReadPosRankSum=-6.903;VQSLOD=2.0257;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:35,0:44:24.49:1037,24,0	1/1:12,0:18:11.03:511,11,0	0/0:50,0:38:29.59:0,30,551	0/0:48,0:37:30.29:0,30,886	1/1:17,0:26:17.49:536,17,0	0/0:23,0:26:54.18:0,54,1865	0/0:16,0:17:27.09:0,27,1043	1/1:36,0:32:39.05:881,39,0	1/1:24,10:41:41.43:1923,41,0	1/1:39,5:46:66.68:2623,67,0	1/1:10,4:15:13.23:549,13,0	0/0:26,0:29:69.20:0,69,2307	0/0:33,0:34:72.25:0,72,2677	0/0:18,0:20:54.14:0,54,1760	1/1:28,7:43:34.82:1586,35,0	1/1:27,4:33:45.03:2328,45,0	1/1:11,1:24:12.51:657,13,0	1/1:11,1:12:9.03:444,9,0	1/1:20,2:25:39.12:1342,39,0	1/1:17,4:24:26.89:1247,27,0	1/1:28,0:28:11.60:314,12,0	0/0:31,0:34:93.31:0,93,3156	0/0:20,0:22:57.19:0,57,1983	0/0:30,0:31:46.20:0,46,2380	1/1:17,3:22:11.63:625,12,0	1/1:24,8:36:69.21:2625,69,0	1/1:28,10:42:57.18:2811,57,0	1/1:8,1:5:6.02:274,6,0
chr10	57648079	.	GTTTC	G	2917.82	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=11.008;DP=648;FS=0.000;HRun=0;HaplotypeScore=102.1681;InbreedingCoeff=0.9993;MQ=73.57;MQ0=0;MQRankSum=-0.851;QD=36.93;ReadPosRankSum=3.120;VQSLOD=3.5302;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,47:49:99:1801,105,0	0/0:10,0:10:30.10:0,30,765	0/0:24,0:23:54.09:0,54,1183	0/0:15,0:15:29.30:0,29,639	1/1:2,27:29:75.15:1239,75,0	0/0:18,0:18:51.16:0,51,1188	0/0:24,0:24:57.14:0,57,1264	0/0:34,0:34:81.24:0,81,1860	0/0:22,0:22:60.21:0,60,1496	0/0:21,0:21:60.20:0,60,1417	0/0:12,0:12:33.07:0,33,773	0/0:23,0:23:66.23:0,66,1673	0/0:16,0:16:48.13:0,48,1169	0/0:18,0:18:51.18:0,51,1276	0/0:19,0:19:57.19:0,57,1393	0/0:20,0:20:57.20:0,57,1452	0/0:36,0:36:99:0,105,2611	0/0:24,0:24:69.24:0,69,1703	0/0:27,0:27:63.21:0,63,1543	0/0:26,0:26:75.26:0,75,1913	0/0:28,0:28:81.28:0,81,2023	0/0:21,0:21:57.18:0,57,1369	0/0:18,0:18:48.16:0,48,1200	0/0:20,0:20:51.17:0,51,1278	0/0:20,0:20:60.21:0,60,1497	0/0:26,0:26:78.27:0,78,1990	0/0:27,0:27:75.26:0,75,1874	0/0:20,0:20:60.10:0,60,1240
chr10	57648261	.	G	GAA	3000.57	PASS	AB=0.738;AC=28;AF=0.500;AN=56;BaseQRankSum=-1.005;DP=538;FS=1.516;HRun=13;HaplotypeScore=83.1123;InbreedingCoeff=0.6303;MQ=54.76;MQ0=12;MQRankSum=-2.546;QD=9.07;ReadPosRankSum=-4.227;VQSLOD=0.8993;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:6,2:30:0.84:82,0,1	0/0:2,0:11:5.92:0,6,49	0/1:26,0:7:1.62:2,0,8	0/0:23,0:10:16.32:0,16,120	1/1:19,1:26:26.80:199,27,0	0/0:13,0:16:20.48:0,20,158	0/0:13,0:15:14.79:0,15,176	0/0:12,0:19:13.03:0,13,58	0/1:6,10:17:46.85:104,0,47	1/1:10,12:22:35.04:364,35,0	1/1:10,2:12:24.05:264,24,0	0/0:17,0:19:41.71:0,42,353	0/0:21,0:21:9.44:0,9,236	0/0:16,0:18:34.85:0,35,264	1/1:0,15:15:9.03:123,9,0	1/1:7,3:27:29.69:274,30,0	0/0:4,0:31:74.25:0,74,331	1/1:4,12:21:36.56:369,37,0	1/1:9,8:17:20.76:258,21,0	1/1:15,3:19:21.02:349,21,0	1/1:6,11:18:16.30:156,16,0	0/0:13,0:14:14.68:0,15,175	0/1:9,0:9:2.17:2,0,67	0/0:16,0:17:35.79:0,36,361	0/1:7,8:15:13.85:110,0,14	1/1:11,8:19:23.94:246,24,0	0/1:8,14:22:5.58:203,0,6	1/1:7,0:7:9:101,9,0
chr10	57650779	.	A	AGCACGT	626.85	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-2.533;DP=602;FS=0.000;HRun=0;HaplotypeScore=122.1041;InbreedingCoeff=0.8974;MQ=77.19;MQ0=0;MQRankSum=-4.396;QD=36.87;ReadPosRankSum=0.333;VQSLOD=3.2764;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,123,2546	0/0:8,0:8:21.06:0,21,429	0/0:14,0:14:33.08:0,33,611	0/0:20,0:20:42.04:0,42,694	0/0:21,0:21:60.19:0,60,1292	0/0:31,0:31:84.27:0,84,1813	0/0:27,0:27:66.23:0,66,1471	0/0:19,0:19:51.17:0,51,1057	0/0:18,0:18:45.15:0,45,977	0/0:16,0:16:39.13:0,39,868	0/0:20,0:20:57.17:0,57,1150	0/0:21,0:21:51.18:0,51,1137	0/0:23,0:23:51.16:0,51,1079	0/0:23,0:23:63.19:0,63,1320	0/0:24,0:24:66.21:0,66,1402	0/0:22,0:22:54.19:0,54,1189	0/0:34,0:34:78.24:0,78,1694	1/1:5,9:17:21.07:719,21,0	0/0:17,0:17:45.12:0,45,907	0/0:19,0:19:36.11:0,36,741	0/0:36,0:36:87.26:0,87,1895	0/0:16,0:16:42.14:0,42,937	0/0:14,0:14:36.10:0,36,719	0/0:38,0:38:96.32:0,96,2096	0/0:16,0:16:42.14:0,42,938	0/0:21,0:21:48.16:0,48,1071	0/0:17,0:17:48.11:0,48,976	0/0:3,0:3:6.02:0,6,134
chr10	57651111	.	TG	T	16258.83	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=7.656;DP=648;FS=0.641;HRun=1;HaplotypeScore=66.9357;InbreedingCoeff=0.9998;MQ=83.46;MQ0=1;MQRankSum=-4.875;QD=37.38;ReadPosRankSum=2.289;VQSLOD=5.4237;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,41:41:99:1508,108,0	1/1:0,12:12:30.10:420,30,0	0/0:22,0:22:57.05:0,57,901	0/0:19,0:19:54.12:0,54,758	1/1:0,29:29:87.25:1195,87,0	0/0:23,0:23:69.24:0,69,1099	0/0:20,0:20:60.20:0,60,959	1/1:0,32:32:96.29:1293,96,0	1/1:0,25:25:63.21:881,63,0	1/1:0,18:18:54.16:737,54,0	1/1:0,20:20:54.18:755,54,0	0/0:20,0:19:54.18:0,54,861	0/0:18,0:18:51.17:0,51,812	0/0:27,0:27:75.26:0,75,1192	1/1:0,29:29:84.28:1175,84,0	1/1:0,16:16:39.13:545,39,0	1/1:0,34:34:84.28:1175,84,0	1/1:0,21:21:60.20:839,60,0	1/1:0,22:22:63.20:867,63,0	1/1:0,19:19:48.16:671,48,0	1/1:0,32:32:81.27:1133,81,0	0/0:14,0:14:42.14:0,42,657	0/0:19,0:19:57.13:0,57,834	0/0:31,0:31:84.29:0,84,1340	1/1:0,15:15:36.12:504,36,0	1/1:0,32:31:93.27:1263,93,0	1/1:0,25:25:60.20:839,60,0	1/1:0,13:13:33.11:460,33,0
chr10	57651600	.	T	TC	359.53	PASS	AB=0.938;AC=3;AF=0.054;AN=56;BaseQRankSum=-4.363;DP=565;FS=1.000;HRun=6;HaplotypeScore=80.3049;InbreedingCoeff=0.6817;MQ=78.62;MQ0=0;MQRankSum=-1.172;QD=11.60;ReadPosRankSum=-0.071;VQSLOD=2.0203;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:90.18:0,90,907	0/0:6,0:6:18.04:0,18,184	0/1:14,0:15:7.14:7,0,275	0/0:28,0:29:29.33:0,29,371	0/0:18,0:18:48.11:0,48,489	0/0:15,0:15:36.08:0,36,367	0/0:25,0:25:69.15:0,69,704	0/0:25,0:25:45.07:0,45,452	0/0:25,0:25:60.13:0,60,612	0/0:22,0:22:63.10:0,63,628	0/0:15,0:15:45.09:0,45,452	0/0:14,0:14:36.08:0,36,366	0/0:11,0:11:30.04:0,30,295	0/0:15,0:15:42.09:0,42,428	0/0:32,0:32:84.18:0,84,856	1/1:1,15:16:36.12:453,36,0	0/0:35,0:35:96.19:0,96,970	0/0:21,0:21:54.12:0,54,550	0/0:18,0:18:45.09:0,45,453	0/0:19,0:19:45.09:0,45,459	0/0:33,0:33:81.17:0,81,826	0/0:14,0:14:33.07:0,33,336	0/0:14,0:14:36.08:0,36,367	0/0:24,0:24:66.13:0,66,664	0/0:9,0:9:24.05:0,24,244	0/0:24,0:24:60.13:0,60,611	0/0:29,0:29:60.11:0,60,607	0/0:9,0:9:24.05:0,24,245
chr10	57652381	.	G	GGTGTGTGTGT	11618.16	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-0.582;DP=765;FS=26.467;HRun=0;HaplotypeScore=245.7725;InbreedingCoeff=0.8233;MQ=62.92;MQ0=8;MQRankSum=-10.353;QD=25.70;ReadPosRankSum=-7.659;VQSLOD=0.8778;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:43,0:45:11.93:364,12,0	1/1:5,0:10:8.88:231,9,0	0/0:44,0:25:3.01:0,3,86	0/0:34,0:23:3.01:0,3,89	1/1:20,0:20:3.48:71,3,0	0/0:25,0:29:51.17:0,51,1380	0/0:30,0:36:65.93:0,66,1669	1/1:36,0:34:38.24:968,38,0	1/1:13,9:27:27.09:1225,27,0	1/1:36,2:40:40.38:1264,40,0	1/1:10,4:14:5.45:297,5,0	0/0:25,0:26:57.19:0,57,1630	0/0:23,0:26:51.17:0,51,1444	0/0:26,0:27:48.15:0,48,1322	1/1:22,5:30:25.02:996,25,0	0/0:9,0:22:21.03:0,21,420	1/1:23,3:30:20.20:858,20,0	1/1:18,0:18:27.94:940,28,0	1/1:17,0:17:10.85:267,11,0	1/1:18,0:18:2.46:19,2,0	1/1:48,0:48:7.32:104,7,0	0/0:18,0:20:24.07:0,24,621	0/0:15,0:16:24.08:0,24,665	0/0:29,0:32:57.15:0,57,1602	1/1:21,4:26:6.02:240,6,0	1/1:32,4:37:54.19:1893,54,0	1/1:21,8:31:39.13:1680,39,0	1/1:3,0:3:6.02:202,6,0
chr10	57653305	.	T	TA	3712.62	PASS	AB=0.792;AC=30;AF=0.536;AN=56;BaseQRankSum=-7.845;DP=350;FS=1.763;HRun=11;HaplotypeScore=42.3340;InbreedingCoeff=0.5961;MQ=74.64;MQ0=9;MQRankSum=-1.828;QD=15.15;ReadPosRankSum=0.337;VQSLOD=3.6344;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:24:19.33:39,0,19	1/1:2,4:6:9.02:91,9,0	0/0:25,0:15:5.78:0,6,90	0/0:9,0:6:4.22:0,4,26	0/1:15,0:15:14.14:14,0,18	0/0:18,0:18:38.83:0,39,301	0/0:8,0:8:11.92:0,12,93	1/1:11,18:29:54.11:548,54,0	1/1:0,6:6:9.02:91,9,0	1/1:2,13:14:18.81:357,19,0	1/1:1,5:6:15.03:152,15,0	0/0:5,0:5:14.93:0,15,113	0/0:13,0:13:35.83:0,36,274	0/0:6,0:6:17.44:0,17,125	1/1:4,14:18:36.07:364,36,0	0/0:7,0:7:2.47:0,2,7	1/1:6,19:24:39.08:396,39,0	1/1:17,0:17:11.89:61,12,0	1/1:6,14:21:26.33:408,26,0	0/1:1,4:5:8.18:107,0,8	1/1:2,3:5:9.02:91,9,0	0/0:3,0:3:2.97:0,3,23	0/0:7,0:6:14.92:0,15,116	0/0:4,0:4:11.95:0,12,93	1/1:1,9:9:18.04:183,18,0	1/1:6,13:19:39.02:377,39,0	1/1:1,9:9:24.05:243,24,0	0/1:4,7:11:16.14:189,0,16
chr10	57653313	.	AAAAT	A	333.96	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=5.418;DP=344;FS=1.819;HRun=0;HaplotypeScore=70.2583;InbreedingCoeff=0.6104;MQ=74.26;MQ0=6;MQRankSum=-0.524;QD=6.42;ReadPosRankSum=0.806;VQSLOD=1.9850;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:23,2:25:22.35:188,22,0	0/0:4,0:4:6.02:0,6,112	0/0:24,0:14:16.87:0,17,242	0/1:11,0:7:32.37:32,0,91	1/1:14,2:16:31.94:241,32,0	0/0:15,0:15:36.12:0,36,833	0/0:6,0:6:15.05:0,15,322	0/0:24,0:24:66.19:0,66,1094	0/0:8,0:8:12.03:0,12,186	0/0:19,0:18:38.83:0,39,649	0/0:7,0:7:14.71:0,15,204	0/0:7,0:7:18.03:0,18,317	0/0:17,0:17:36.10:0,36,661	0/0:7,0:7:18.06:0,18,400	0/0:14,0:14:24.08:0,24,438	0/0:6,0:6:1.77:0,2,5	0/0:23,0:22:36.11:0,36,639	0/0:18,0:16:13.43:0,13,132	0/0:21,0:21:45.15:0,45,805	0/0:6,0:6:15.05:0,15,281	0/0:5,0:5:12.04:0,12,208	0/0:2,0:2:3.01:0,3,71	0/0:6,0:6:15.04:0,15,300	0/0:6,0:6:15.02:0,15,265	0/0:11,0:11:24.07:0,24,397	0/0:14,0:14:21.05:0,21,333	0/0:10,0:10:24.08:0,24,414	0/0:12,0:12:21.05:0,21,377
chr10	57653314	.	AAAT	A	1215.85	PASS	AB=1.000;AC=18;AF=0.321;AN=56;BaseQRankSum=-0.669;DP=343;FS=7.067;HRun=0;HaplotypeScore=59.4045;InbreedingCoeff=-0.0159;MQ=72.05;MQ0=3;MQRankSum=-0.029;QD=6.05;ReadPosRankSum=-2.235;VQSLOD=0.5757;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,19:25:37.12:417,37,0	0/1:4,0:4:21.29:21,0,73	0/0:22,0:12:11.67:0,12,259	0/1:11,0:7:31.68:32,0,93	1/1:3,13:16:36.01:439,36,0	0/0:15,0:15:42.09:0,42,755	0/0:8,0:8:24.03:0,24,343	0/0:26,0:26:44.73:0,45,843	0/1:8,0:8:15.29:15,0,131	0/1:18,0:18:63.24:63,0,416	0/1:7,0:7:39.92:40,0,138	0/0:7,0:7:21.02:0,21,294	0/0:17,0:17:48.04:0,48,717	0/0:7,0:7:20.54:0,21,337	0/1:14,0:14:84.11:84,0,266	1/1:6,0:6:5.49:24,5,0	0/1:22,0:22:18.52:19,0,429	0/1:17,0:16:4.94:5,0,49	0/1:21,0:21:47.30:47,0,563	0/1:6,0:6:12.28:12,0,186	0/0:5,0:5:12.02:0,12,146	0/0:2,0:2:2.99:0,3,61	0/0:6,0:6:18.04:0,18,288	0/0:6,0:6:18.01:0,18,254	0/0:11,0:11:23.65:0,24,281	0/1:14,0:14:99:136,0,169	0/0:10,0:10:24.06:0,24,298	0/1:12,0:12:33.50:33,0,275
chr10	57653315	.	AAT	A	513.74	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=4.737;DP=342;FS=7.496;HRun=0;HaplotypeScore=56.7784;InbreedingCoeff=0.5032;MQ=73.31;MQ0=3;MQRankSum=0.964;QD=5.19;ReadPosRankSum=-2.278;VQSLOD=0.6978;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:22,2:24:31.66:279,32,0	0/1:4,0:4:0.06:0,0,50	0/0:23,0:13:20.47:0,20,247	0/0:11,0:7:0.98:0,1,74	1/1:15,0:15:35.18:252,35,0	0/0:14,0:14:42.12:0,42,623	0/0:8,0:8:24.04:0,24,305	0/0:26,0:26:62.98:0,63,646	0/0:8,0:8:5.94:0,6,100	0/1:18,0:18:0.42:0,0,281	0/0:7,0:7:2.56:0,3,106	0/0:7,0:7:21.02:0,21,254	0/0:17,0:17:48.06:0,48,614	0/0:7,0:7:20.54:0,21,275	0/0:15,0:15:0.72:0,1,201	1/1:1,5:6:6.02:82,6,0	0/0:22,0:22:23.90:0,24,328	1/1:17,0:16:4.09:26,4,0	0/0:21,0:21:30.50:0,30,452	0/0:6,0:6:8.96:0,9,153	0/0:5,0:5:12:0,12,111	0/0:2,0:2:2.98:0,3,49	0/0:6,0:6:18.05:0,18,256	0/0:6,0:6:18.02:0,18,223	0/0:11,0:11:23.62:0,24,211	0/1:15,0:15:18.92:19,0,172	0/0:10,0:10:23.53:0,24,221	0/0:11,0:11:14.88:0,15,243
chr10	57654262	.	C	CTT	20042.05	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=8.530;DP=765;FS=0.851;HRun=1;HaplotypeScore=124.3801;InbreedingCoeff=0.9957;MQ=85.16;MQ0=0;MQRankSum=-10.131;QD=49.24;ReadPosRankSum=2.054;VQSLOD=4.9098;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,160,2411	1/1:1,11:12:36.08:653,36,0	0/0:36,0:36:99:0,108,1549	0/0:31,0:31:87.02:0,87,1247	0/0:21,0:21:63.20:0,63,940	0/0:18,0:18:54.18:0,54,825	0/0:27,0:27:75.22:0,75,1103	1/1:5,24:31:84.26:1554,84,0	1/1:4,25:29:69.15:1257,69,0	1/1:3,35:37:99:2006,108,0	1/1:2,14:17:45.11:831,45,0	0/0:25,0:25:75.25:0,75,1148	0/0:21,0:21:57.19:0,57,870	0/0:30,0:30:90.29:0,90,1350	1/1:7,31:38:99:1860,105,0	0/0:31,0:31:93.28:0,93,1361	1/1:5,31:36:84.29:1606,84,0	1/1:3,23:27:69.24:1308,69,0	1/1:4,25:30:87.27:1586,87,0	1/1:3,17:20:57.15:1063,57,0	1/1:5,34:39:96.29:1817,96,0	0/0:17,0:17:48.15:0,48,714	0/0:14,0:14:42.14:0,42,641	0/0:32,0:32:96.29:0,96,1425	1/1:2,14:16:42.06:735,42,0	1/1:2,27:31:93.24:1647,93,0	1/1:3,32:35:99:1894,102,0	1/1:0,7:8:12.04:225,12,0
chr10	57654462	.	TTC	T	473.61	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.630;DP=555;FS=3.431;HRun=0;HaplotypeScore=66.2676;InbreedingCoeff=0.9522;MQ=62.52;MQ0=4;MQRankSum=-0.932;QD=29.60;ReadPosRankSum=0.405;VQSLOD=4.9036;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:39:99:0,117,1894	0/0:9,0:9:27.08:0,27,412	0/0:15,0:10:22.20:0,22,276	0/0:6,0:6:10.18:0,10,179	0/0:18,0:18:51.17:0,51,759	0/0:16,0:16:45.15:0,45,792	0/0:18,0:18:51.17:0,51,896	0/0:36,0:34:96.21:0,96,1354	0/0:13,0:13:36.11:0,36,568	0/0:26,0:26:78.23:0,78,1199	0/0:22,0:22:66.18:0,66,1056	0/0:13,0:13:39.11:0,39,629	0/0:20,0:20:60.10:0,60,866	0/0:15,0:15:42.10:0,42,617	0/0:25,0:25:72.22:0,72,1101	0/0:29,0:29:87.27:0,87,1402	0/0:25,0:25:75.21:0,75,1213	1/1:2,14:15:39:568,39,0	0/0:13,0:13:36.08:0,36,520	0/0:17,0:17:51.16:0,51,852	0/0:22,0:22:66.18:0,66,1020	0/0:15,0:15:45.14:0,45,728	0/0:22,0:22:63.16:0,63,1006	0/0:23,0:23:54.94:0,55,1081	0/0:25,0:25:60.52:0,61,1134	0/0:16,0:16:48.14:0,48,756	0/0:25,0:25:75.09:0,75,1154	0/0:14,0:14:42.08:0,42,603
chr10	57654564	.	G	GT	341.23	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=0.818;DP=518;FS=7.247;HRun=7;HaplotypeScore=50.9079;InbreedingCoeff=0.6836;MQ=67.95;MQ0=5;MQRankSum=-0.369;QD=11.01;ReadPosRankSum=-1.263;VQSLOD=1.1536;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:81.11:0,81,776	0/0:13,0:13:27.03:0,27,261	0/1:15,0:9:6.20:6,0,115	0/0:26,0:14:21.86:0,22,183	0/0:23,0:23:63.09:0,63,604	0/0:14,0:14:42.03:0,42,393	0/0:14,0:14:36.04:0,36,342	0/0:24,0:23:56.61:0,57,542	0/0:19,0:19:54.07:0,54,513	0/0:25,0:25:63.09:0,63,608	0/0:17,0:17:39.05:0,39,376	0/0:9,0:9:24.04:0,24,232	0/0:12,0:12:30.03:0,30,283	0/0:15,0:15:39.04:0,39,370	0/0:15,0:15:30:0,30,281	0/0:11,0:11:30.03:0,30,283	0/0:40,0:40:99:0,99,922	1/1:2,14:16:36.11:435,36,0	0/0:24,0:22:48.04:0,48,454	0/0:30,0:30:84.05:0,84,798	0/0:14,0:14:39.03:0,39,364	0/0:14,0:14:32.07:0,32,291	0/0:17,0:17:45.06:0,45,434	0/0:9,0:9:23.97:0,24,217	0/0:19,0:19:48.06:0,48,460	0/0:23,0:23:69.09:0,69,659	0/0:22,0:22:60.06:0,60,566	0/0:5,0:5:15.02:0,15,145
chr10	57655321	.	TC	T	421.09	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.440;DP=653;FS=5.018;HRun=6;HaplotypeScore=67.6595;InbreedingCoeff=0.9826;MQ=70.59;MQ0=4;MQRankSum=-0.370;QD=24.77;ReadPosRankSum=1.057;VQSLOD=3.5664;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,120,1520	0/0:9,0:9:27.09:0,27,354	0/0:28,1:20:31.51:0,32,367	0/0:34,0:27:43.53:0,44,499	0/0:31,0:31:81.24:0,81,1048	0/0:23,0:23:66.21:0,66,868	0/0:21,0:21:57.19:0,57,750	0/0:29,0:29:81.23:0,81,1022	0/0:35,0:35:99:0,102,1316	0/0:25,0:25:72.23:0,72,945	0/0:13,0:13:30.10:0,30,394	0/0:16,0:16:45.15:0,45,592	0/0:17,0:17:48.16:0,48,630	0/0:15,0:15:45.15:0,45,592	0/0:31,0:31:90.27:0,90,1151	1/1:0,17:17:48.12:516,48,0	0/0:23,0:23:63.15:0,63,783	0/0:20,0:20:56.77:0,57,720	0/0:18,0:18:51.12:0,51,638	0/0:20,0:20:60.17:0,60,761	0/0:29,0:29:84.26:0,84,1087	0/0:19,0:19:51.14:0,51,642	0/0:23,0:23:62.79:0,63,795	0/0:33,0:33:90.24:0,90,1148	0/0:16,0:16:48.16:0,48,631	0/0:24,0:24:69.22:0,69,895	0/0:32,0:32:90.27:0,90,1166	0/0:5,0:5:15.05:0,15,197
chr10	57655491	.	TGA	T	64.43	PASS	AB=0.780;AC=2;AF=0.036;AN=56;BaseQRankSum=4.731;DP=618;FS=0.000;HRun=0;HaplotypeScore=75.7095;InbreedingCoeff=-0.0374;MQ=77.27;MQ0=4;MQRankSum=-3.583;QD=1.02;ReadPosRankSum=-1.650;VQSLOD=1.0293;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,120,2435	0/0:8,0:8:24.08:0,24,476	0/1:24,11:25:99:103,0,972	0/1:21,7:23:50.06:50,0,813	0/0:22,0:22:66.23:0,66,1339	0/0:22,0:22:66.20:0,66,1255	0/0:19,0:19:57.20:0,57,1158	0/0:26,0:26:78.26:0,78,1522	0/0:27,0:27:81.28:0,81,1609	0/0:18,0:18:54.19:0,54,1089	0/0:17,0:17:51.17:0,51,1011	0/0:25,0:25:75.26:0,75,1499	0/0:13,0:13:39.13:0,39,792	0/0:20,0:20:60.21:0,60,1175	0/0:29,0:29:87.28:0,87,1702	0/0:15,0:15:45.15:0,45,903	0/0:33,0:33:96.30:0,96,1893	0/0:15,0:15:45.12:0,45,869	0/0:24,0:24:72.24:0,72,1406	0/0:26,0:26:78.27:0,78,1584	0/0:26,0:26:78.24:0,78,1498	0/0:21,0:21:63.21:0,63,1245	0/0:23,0:23:69.24:0,69,1401	0/0:24,0:24:69.24:0,69,1346	0/0:18,0:17:54.19:0,54,1073	0/0:17,0:17:51.17:0,51,1002	0/0:16,0:16:48.16:0,48,948	0/0:6,0:6:18.06:0,18,366
chr10	57656100	.	C	CA	208.59	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-2.672;DP=600;FS=11.580;HRun=6;HaplotypeScore=76.2141;InbreedingCoeff=0.8625;MQ=69.55;MQ0=0;MQRankSum=-3.185;QD=18.96;ReadPosRankSum=-0.013;VQSLOD=2.2053;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,156,1573	0/0:3,0:3:9.02:0,9,92	0/0:5,0:5:12:0,12,112	0/0:9,0:9:8.37:0,8,67	0/0:29,0:29:84.19:0,84,857	0/0:27,0:25:81.16:0,81,814	0/0:18,0:18:51.10:0,51,513	0/0:35,0:35:90.20:0,90,914	0/0:25,0:25:69.15:0,69,704	0/0:21,0:21:54.11:0,54,545	0/0:19,0:19:48.08:0,48,481	0/0:23,0:23:66.15:0,66,673	0/0:15,0:15:33.07:0,33,336	0/0:16,0:16:45.08:0,45,447	0/0:16,0:16:48.09:0,48,483	0/0:24,0:24:63.13:0,63,636	0/0:29,0:29:75.17:0,75,765	1/1:1,10:11:24.08:302,24,0	0/0:24,0:24:61.46:0,61,640	0/0:32,0:32:87.19:0,87,887	0/0:33,0:33:93.19:0,93,941	0/0:16,0:16:45.10:0,45,459	0/0:15,0:15:36.07:0,36,361	0/0:17,0:17:48.11:0,48,490	0/0:17,0:17:42.09:0,42,428	0/0:28,0:28:81.18:0,81,826	0/0:22,0:21:56.80:0,57,562	0/0:17,0:17:51.12:0,51,520
chr10	57656400	.	A	AT	405.06	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.333;DP=563;FS=2.108;HRun=7;HaplotypeScore=55.4782;InbreedingCoeff=0.8376;MQ=70.53;MQ0=0;MQRankSum=-0.336;QD=28.93;ReadPosRankSum=0.401;VQSLOD=4.2218;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:78.10:0,78,746	0/0:11,0:11:33.04:0,33,313	0/0:10,0:9:5.66:0,6,127	0/0:9,0:9:8.97:0,9,86	0/0:27,0:27:75.10:0,75,719	0/0:31,0:31:84.10:0,84,798	0/0:12,0:12:33.05:0,33,319	0/0:34,0:34:81.12:0,81,782	0/0:8,0:8:15.02:0,15,145	0/0:29,0:29:72.10:0,72,690	0/0:25,0:25:72.12:0,72,695	0/0:14,0:14:42.07:0,42,405	0/0:25,0:25:69.11:0,69,666	0/0:17,0:17:51.08:0,51,493	0/0:19,0:19:31.42:0,31,438	0/0:17,0:17:48.08:0,48,463	0/0:17,0:17:45.07:0,45,434	1/1:0,14:14:42.13:500,42,0	0/0:32,0:32:81.12:0,81,782	0/0:25,0:25:63.09:0,63,608	0/0:23,0:23:63.09:0,63,608	0/0:24,0:24:66.09:0,66,632	0/0:18,0:18:54.09:0,54,520	0/0:11,0:11:27.04:0,27,261	0/0:18,0:18:51.08:0,51,492	0/0:30,0:30:81.09:0,81,767	0/0:25,0:24:72.08:0,72,682	0/0:9,0:9:21.03:0,21,203
chr10	57659208	.	TTCTCTCTCTCTCTCTC	T	3769.50	PASS	AB=0.643;AC=21;AF=0.404;AN=52;BaseQRankSum=6.641;DP=394;FS=2.814;HRun=0;HaplotypeScore=160.7845;InbreedingCoeff=0.7040;MQ=62.03;MQ0=14;MQRankSum=-6.866;QD=30.16;ReadPosRankSum=0.025;VQSLOD=2.6570;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:31.46:0,31,1532	1/1:5,0:5:3.01:105,3,0	0/0:18,0:7:18.32:0,18,576	0/0:29,0:17:33.11:0,33,1603	0/0:7,0:15:12.51:0,13,295	0/0:15,0:15:27.09:0,27,1590	0/0:20,0:18:27.09:0,27,1697	1/1:8,6:14:21.07:814,21,0	1/1:6,5:11:11.06:201,11,0	0/1:4,0:8:25.89:552,0,26	1/1:6,0:6:6.02:181,6,0	0/0:8,0:7:12.04:0,12,791	0/0:14,0:13:32.49:0,32,1758	0/0:11,0:11:21.07:0,21,958	./.	0/0:7,0:9:3:0,3,26	1/1:6,9:13:3.01:133,3,0	0/0:12,0:10:18.06:0,18,501	1/1:9,0:11:6.02:153,6,0	1/1:2,6:8:3.01:104,3,0	0/0:13,14:27:0.89:0,1,2	0/0:11,0:11:27.07:0,27,1200	0/0:12,0:12:27.08:0,27,1784	0/0:33,0:32:51.18:0,51,3153	1/1:18,0:17:3.01:109,3,0	1/1:7,5:12:15.05:672,15,0	1/1:11,3:12:18.06:745,18,0	./.
chr10	57659217	.	TCTCTCTCTCTCTCTCTCACACA	T	4101.42	PASS	AB=1.000;AC=21;AF=0.404;AN=52;BaseQRankSum=6.834;DP=386;FS=7.908;HRun=0;HaplotypeScore=176.9694;InbreedingCoeff=0.7083;MQ=52.97;MQ0=23;MQRankSum=-6.577;QD=38.69;ReadPosRankSum=1.804;VQSLOD=2.3371;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:22:31.46:0,31,1624	1/1:4,0:5:3.01:74,3,0	0/0:18,0:7:18.32:0,18,576	0/0:24,0:12:33.11:0,33,1604	0/0:14,0:14:12.51:0,13,295	0/0:18,0:18:33.63:0,34,2121	0/0:20,0:17:31.10:0,31,1755	1/1:10,0:9:21.07:814,21,0	1/1:9,0:8:11.05:201,11,0	0/1:9,0:8:25.89:541,0,26	1/1:7,0:6:6.02:300,6,0	0/0:15,0:13:27.09:0,27,1775	0/0:19,0:18:46.88:0,47,2468	0/0:10,0:10:22.31:0,22,1021	./.	0/0:6,0:6:3:0,3,26	1/1:13,0:11:3.01:133,3,0	0/0:13,0:10:21.07:0,21,633	1/1:4,0:4:6.02:153,6,0	1/1:8,1:8:3.01:162,3,0	0/0:19,0:19:0.89:0,1,2	0/0:13,0:13:30.97:0,31,1456	0/0:14,0:14:30.09:0,30,2518	0/0:41,0:37:55.07:0,55,3696	1/1:5,0:15:3.01:111,3,0	1/1:8,0:8:15.05:672,15,0	1/1:4,11:14:18.06:941,18,0	./.
chr10	57659219	.	TCTCTCTCTCTCTCTCACACACA	T	3811.96	PASS	AC=22;AF=0.423;AN=52;BaseQRankSum=7.540;DP=360;FS=6.827;HRun=0;HaplotypeScore=163.1365;InbreedingCoeff=0.7670;MQ=54.02;MQ0=24;MQRankSum=-7.176;QD=42.83;ReadPosRankSum=2.186;VQSLOD=2.3170;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:22:31.46:0,31,1378	1/1:1,0:1:3.01:56,3,0	0/0:18,0:7:18.43:0,18,430	0/0:24,0:12:33.07:0,33,1401	0/0:15,0:14:12.47:0,12,202	0/0:17,0:17:33.63:0,34,1950	0/0:20,0:17:31.52:0,32,1543	1/1:8,0:7:21.03:714,21,0	1/1:8,0:7:2.35:115,2,0	1/1:9,0:8:18.06:689,18,0	1/1:2,5:6:6.02:334,6,0	0/0:15,0:13:27.09:0,27,1639	0/0:19,0:18:41.38:0,41,2188	0/0:10,0:10:22.29:0,22,919	./.	0/0:7,0:7:3.01:0,3,50	1/1:11,0:9:3.01:113,3,0	0/0:13,0:10:24.06:0,24,631	1/1:3,0:3:6:145,6,0	1/1:9,0:8:3.01:145,3,0	0/0:15,0:15:0.89:0,1,2	0/0:12,0:12:27.88:0,28,1255	0/0:13,0:13:27.09:0,27,2444	0/0:41,0:37:55.07:0,55,3382	1/1:14,0:12:3.01:93,3,0	1/1:5,0:5:15.05:573,15,0	1/1:14,0:13:18.06:837,18,0	./.
chr10	57659300	.	TTCTCTCTC	T	920.46	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=2.012;DP=512;FS=2.127;HRun=0;HaplotypeScore=158.1450;InbreedingCoeff=0.6961;MQ=49.51;MQ0=20;MQRankSum=-5.267;QD=7.93;ReadPosRankSum=-3.313;VQSLOD=1.7429;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:19:15.50:0,16,424	0/0:8,0:8:1.17:0,1,113	0/0:18,0:9:2.50:0,2,9	0/0:19,0:10:0.47:0,0,1	0/0:14,0:14:12.04:0,12,290	1/1:15,6:23:18.01:375,18,0	1/1:21,2:23:9.03:183,9,0	0/0:39,0:36:6:0,6,66	0/0:18,0:21:43:0,43,1264	0/0:17,0:17:27.09:0,27,907	0/0:14,0:12:12.04:0,12,437	1/1:9,0:9:3.01:56,3,0	0/0:14,0:15:6.37:0,6,289	0/0:8,0:10:18.04:0,18,481	0/0:12,0:17:9.02:0,9,234	1/1:10,2:13:5.98:95,6,0	0/0:17,0:21:47.95:0,48,808	0/0:20,0:18:24.04:0,24,758	0/0:14,0:12:9.03:0,9,287	0/0:21,0:21:24.11:0,24,767	0/0:32,0:30:5.86:0,6,90	1/1:5,4:9:8.82:224,9,0	1/1:9,2:10:3.01:32,3,0	1/1:14,9:23:6.96:119,7,0	0/0:16,0:18:21.04:0,21,538	0/0:20,0:20:36.51:0,37,1049	0/0:15,0:17:30.10:0,30,967	0/0:10,0:10:12.04:0,12,331
chr10	57662499	.	G	GAA	4989.47	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-3.194;DP=461;FS=0.000;HRun=3;HaplotypeScore=80.4718;InbreedingCoeff=0.8750;MQ=77.83;MQ0=9;MQRankSum=0.102;QD=18.21;ReadPosRankSum=-1.388;VQSLOD=1.5863;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:31,1:32:64.88:673,65,0	1/1:6,0:6:10.83:130,11,0	0/0:31,0:22:36.86:0,37,386	0/0:35,0:18:14.68:0,15,179	1/1:14,0:14:35.95:312,36,0	0/0:15,0:15:41.90:0,42,344	0/0:14,0:14:29.98:0,30,263	1/1:24,0:24:63.45:571,63,0	1/1:9,0:9:15.89:202,16,0	1/1:3,17:19:51.75:489,52,0	1/1:2,6:8:8.60:110,9,0	0/0:17,0:17:44.85:0,45,364	0/0:18,0:17:42.70:0,43,344	0/0:17,0:17:41.94:0,42,421	1/1:18,0:18:45.03:433,45,0	1/1:6,15:21:16.94:144,17,0	1/1:17,0:17:0.10:216,0,0	1/1:10,0:10:28.77:214,29,0	1/1:19,0:19:38.97:337,39,0	1/1:8,0:7:4.70:68,5,0	1/1:1,10:12:6.49:109,6,0	0/0:11,0:12:29.97:0,30,253	0/0:9,0:9:20.96:0,21,173	0/0:19,0:19:14.40:0,14,310	1/1:12,0:12:29.95:286,30,0	1/1:22,0:22:62.89:542,63,0	1/1:4,15:19:6.02:106,6,0	1/1:3,0:2:5.98:49,6,0
chr10	57662501	.	AAG	A	489.84	PASS	AB=0.932;AC=17;AF=0.315;AN=54;BaseQRankSum=-1.439;DP=471;FS=15.551;HRun=0;HaplotypeScore=89.1643;InbreedingCoeff=0.2108;MQ=76.40;MQ0=10;MQRankSum=1.239;QD=2.85;ReadPosRankSum=0.148;VQSLOD=0.9210;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:35:23.82:0,24,187	0/0:6,0:6:3:0,3,26	./.	0/0:35,0:18:0.47:0,0,1	0/0:16,0:16:17.23:0,17,168	1/1:12,3:15:9.02:97,9,0	1/1:9,6:15:8.86:79,9,0	0/0:25,0:25:2.99:0,3,23	0/0:9,0:9:12.02:0,12,115	0/1:20,0:19:17.50:17,0,90	0/0:9,0:8:6:0,6,53	1/1:11,1:16:14.52:98,15,0	0/1:17,2:18:14.27:14,0,178	0/0:16,0:16:24.04:0,24,310	0/0:18,0:18:6.01:0,6,57	0/0:21,0:21:2.97:0,3,27	0/0:17,0:17:18.02:0,18,169	1/1:10,0:10:5.85:46,6,0	0/0:21,0:21:2.22:0,2,168	0/1:9,0:8:16.73:17,0,48	0/1:13,0:13:13.02:13,0,63	1/1:12,1:13:3.83:71,4,0	0/1:7,0:9:35.39:37,0,35	0/1:15,3:20:2.42:153,0,2	0/1:13,0:13:0.75:1,0,121	0/0:22,0:22:3.01:0,3,34	0/0:16,0:16:6:0,6,54	0/0:3,0:2:3:0,3,28
chr10	57662674	.	CT	C	192.68	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=-0.332;DP=400;FS=20.113;HRun=10;HaplotypeScore=52.9276;InbreedingCoeff=0.6499;MQ=69.87;MQ0=4;MQRankSum=0.698;QD=6.22;ReadPosRankSum=0.852;VQSLOD=0.2045;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:57.10:0,57,608	0/0:5,0:5:9.02:0,9,99	0/0:24,0:13:23.02:0,23,179	0/1:16,0:8:4.42:4,0,46	0/0:16,0:16:39.10:0,39,426	0/0:6,0:6:15.04:0,15,166	0/0:14,0:14:27.03:0,27,278	0/0:23,0:23:38.04:0,38,419	0/0:7,0:7:15.04:0,15,162	0/0:10,0:10:24.06:0,24,261	0/0:19,1:20:46:0,46,484	0/0:12,0:12:30.08:0,30,332	0/0:15,0:15:33.05:0,33,351	0/0:13,0:13:36.09:0,36,390	0/0:8,0:8:16.59:0,17,168	0/0:13,0:13:33.09:0,33,365	0/0:21,0:21:57.14:0,57,617	1/1:1,14:15:32.99:286,33,0	0/0:17,1:17:18.57:0,19,403	0/0:19,0:18:25.09:0,25,501	0/0:17,0:17:27.07:0,27,297	0/0:13,0:13:33.09:0,33,361	0/0:13,0:13:24.06:0,24,265	0/0:12,0:12:36.09:0,36,393	0/0:10,0:10:21.06:0,21,230	0/0:16,0:16:37.49:0,37,371	0/0:8,0:8:18.05:0,18,196	0/0:12,0:11:27.07:0,27,296
chr10	57662685	.	C	CT	3158.47	PASS	AB=0.918;AC=30;AF=0.536;AN=56;BaseQRankSum=-7.777;DP=381;FS=4.413;HRun=10;HaplotypeScore=38.0854;InbreedingCoeff=0.7457;MQ=62.13;MQ0=8;MQRankSum=-1.182;QD=13.91;ReadPosRankSum=1.394;VQSLOD=3.1308;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:53.85:0,54,434	1/1:1,2:3:3.01:32,3,0	0/1:20,1:8:31.97:35,0,32	0/0:15,0:7:2.09:0,2,48	0/0:14,0:15:31.99:0,32,252	0/0:6,0:6:8.98:0,9,74	0/0:9,0:9:20.94:0,21,169	1/1:11,11:21:33.54:340,34,0	1/1:0,6:6:15.04:160,15,0	1/1:4,8:12:18.04:188,18,0	1/1:6,17:23:14.45:356,14,0	0/0:11,0:11:26.96:0,27,221	0/0:14,0:14:29.09:0,29,218	0/0:12,0:12:32.96:0,33,271	1/1:1,7:8:15.03:155,15,0	0/0:12,0:12:32.94:0,33,271	1/1:4,16:20:2.24:431,2,0	0/0:15,0:15:35.92:0,36,291	1/1:6,11:16:33.04:327,33,0	1/1:9,10:18:11.45:323,11,0	1/1:3,10:13:18.05:192,18,0	0/0:11,0:11:29.96:0,30,246	0/0:10,0:10:17.48:0,17,133	0/1:13,2:15:25.07:25,0,227	1/1:1,12:12:21.05:224,21,0	1/1:4,11:15:33.03:326,33,0	1/1:2,7:9:12.03:128,12,0	1/1:6,5:9:12.03:128,12,0
chr10	57663170	.	GTTTT	G	1479.42	PASS	AB=0.752;AC=19;AF=0.352;AN=54;BaseQRankSum=10.371;DP=449;FS=27.610;HRun=8;HaplotypeScore=101.3446;InbreedingCoeff=0.0300;MQ=54.21;MQ0=3;MQRankSum=-5.558;QD=6.16;ReadPosRankSum=0.833;VQSLOD=-0.7303;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:2,34:36:48.16:827,48,0	0/1:1,0:3:9.21:9,0,14	0/0:13,0:11:17.22:0,17,226	0/0:11,0:8:11.19:0,11,151	1/1:0,21:21:32.66:427,33,0	0/0:20,0:21:60.15:0,60,1337	0/0:27,0:27:66.02:0,66,1141	0/0:15,0:14:27.36:0,27,220	0/1:4,0:8:7.15:24,0,7	0/1:3,0:5:5.07:5,0,13	1/1:1,0:2:2.50:9,2,0	0/0:19,0:19:48.08:0,48,1027	0/0:14,0:14:39.05:0,39,842	0/0:21,0:21:51.13:0,51,1021	0/1:8,0:11:8.95:9,0,65	0/1:11,0:11:1.44:1,0,91	0/1:21,0:22:17.30:17,0,186	0/1:24,0:24:99:177,0,106	0/1:8,0:12:2.28:2,0,140	0/1:5,0:13:17.79:18,0,89	0/1:9,0:14:0.51:1,0,66	0/0:19,0:19:51.06:0,51,1016	0/0:14,0:14:39.06:0,39,732	0/0:28,0:30:90.18:0,90,1854	0/1:7,0:15:57.89:58,0,64	0/1:7,0:10:6.25:6,0,84	0/1:18,0:23:45.91:46,0,73	./.
chr10	57663174	.	T	TTG	4267.16	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=6.046;DP=447;FS=23.159;HRun=0;HaplotypeScore=83.2472;InbreedingCoeff=0.9314;MQ=53.71;MQ0=3;MQRankSum=-7.139;QD=24.81;ReadPosRankSum=-0.290;VQSLOD=3.1271;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:34:46.49:0,46,257	1/1:3,0:3:8.50:77,8,0	0/0:12,0:10:21.06:0,21,298	0/0:13,0:7:15.05:0,15,211	0/0:23,0:23:32.15:0,32,256	0/0:22,0:22:59.32:0,59,815	0/0:25,0:25:66.20:0,66,958	1/1:5,11:12:33.98:536,34,0	1/1:7,0:7:13.74:98,14,0	1/1:3,2:4:11.66:135,12,0	1/1:3,0:3:3.01:32,3,0	0/0:16,0:16:45.15:0,45,679	0/0:13,0:13:39.13:0,39,589	0/0:19,0:18:50.36:0,50,676	1/1:4,8:11:20.14:249,20,0	0/0:10,0:10:23.95:0,24,239	1/1:16,12:24:56.33:793,56,0	0/0:24,0:24:51.08:0,51,569	1/1:6,7:12:35.40:470,35,0	1/1:12,3:15:29.02:349,29,0	1/1:7,8:15:21.26:277,21,0	0/0:19,0:19:51.14:0,51,746	0/0:14,0:14:39.09:0,39,547	0/0:30,0:30:88.68:0,89,1260	1/1:14,3:16:37.46:423,37,0	1/1:10,3:12:27.93:364,28,0	1/1:6,17:22:37.55:451,38,0	1/1:1,1:2:2.80:13,3,0
chr10	57663175	.	TTTTG	T	2797.48	PASS	AB=1.000;AC=33;AF=0.611;AN=54;BaseQRankSum=12.258;DP=448;FS=52.145;HRun=0;HaplotypeScore=98.3103;InbreedingCoeff=0.7885;MQ=53.63;MQ0=3;MQRankSum=-5.373;QD=10.64;ReadPosRankSum=-1.478;VQSLOD=0.6764;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:35,0:34:48.07:465,48,0	1/1:3,0:3:6:54,6,0	0/0:12,0:10:5.94:0,6,42	./.	0/1:24,0:24:29.83:197,0,30	0/0:22,0:22:51.17:0,51,1143	0/0:25,0:25:36.12:0,36,806	1/1:16,0:12:2.88:15,3,0	1/1:7,0:7:12.01:109,12,0	1/1:5,0:4:8.68:64,9,0	1/1:3,0:3:5.22:34,5,0	0/0:15,0:15:36.12:0,36,813	0/0:13,0:13:30.10:0,30,672	0/0:20,0:19:39:0,39,770	1/1:12,0:11:11.80:95,12,0	1/1:5,0:10:9.01:84,9,0	1/1:30,0:26:35:262,35,0	1/1:6,17:23:33.11:520,33,0	1/1:13,0:12:14.99:129,15,0	1/1:15,0:15:29.31:207,29,0	1/1:14,0:14:14.37:94,14,0	0/0:19,0:19:39.12:0,39,822	0/0:15,0:15:25.33:0,25,522	0/0:30,0:30:66.22:0,66,1430	1/1:16,0:15:32.78:287,33,0	1/1:13,0:12:17.40:129,17,0	1/1:24,0:23:29.31:257,29,0	0/0:2,0:2:2.99:0,3,24
chr10	57663177	.	TTG	T	3163.50	PASS	AB=1.000;AC=28;AF=0.500;AN=56;BaseQRankSum=12.735;DP=446;FS=49.977;HRun=0;HaplotypeScore=82.0006;InbreedingCoeff=0.7987;MQ=52.62;MQ0=3;MQRankSum=-6.257;QD=15.74;ReadPosRankSum=-0.762;VQSLOD=1.2014;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:35:26.70:0,27,86	1/1:2,1:3:8.99:81,9,0	0/0:12,0:10:29.63:0,30,256	0/0:10,0:5:15.04:0,15,163	0/0:24,0:24:18.15:0,18,166	0/0:22,0:22:63.07:0,63,927	0/0:22,0:22:66.10:0,66,916	1/1:14,0:10:29.41:266,29,0	1/1:4,2:6:14.97:128,15,0	1/1:5,0:4:11.97:98,12,0	1/1:3,0:3:5.17:31,5,0	0/0:15,0:15:45.15:0,45,720	0/0:14,0:14:42.05:0,42,632	0/0:19,0:18:51.01:0,51,728	1/1:12,0:11:20.99:187,21,0	0/1:10,0:10:19.27:19,0,53	1/1:24,5:25:59.62:565,60,0	0/1:23,0:23:99:106,0,120	1/1:13,0:12:35.94:311,36,0	1/1:13,2:15:44.30:351,44,0	1/1:14,0:14:26.43:196,26,0	0/0:19,0:19:53.99:0,54,774	0/0:16,0:16:39.93:0,40,555	0/0:33,0:33:90.15:0,90,1374	1/1:14,2:15:44.72:384,45,0	1/1:11,3:13:32.53:273,33,0	1/1:23,1:23:41.57:385,42,0	0/0:2,0:2:1.25:0,1,3
chr10	57663180	.	TTTG	T	4265.93	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=11.511;DP=439;FS=52.372;HRun=0;HaplotypeScore=85.3825;InbreedingCoeff=0.7646;MQ=51.08;MQ0=5;MQRankSum=-5.765;QD=20.81;ReadPosRankSum=-1.084;VQSLOD=2.1115;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:35:39.82:0,40,222	1/1:1,2:3:8.52:97,9,0	0/1:10,0:8:1.22:1,0,232	0/0:11,0:5:15.04:0,15,175	0/0:24,0:23:26.11:0,26,289	0/0:22,0:22:63.21:0,63,1326	0/0:22,0:22:62.93:0,63,1131	1/1:11,4:11:29.40:214,29,0	1/1:2,4:6:14.54:183,15,0	1/1:2,3:4:11.63:137,12,0	1/1:0,3:3:9.03:120,9,0	0/0:16,0:16:48.16:0,48,968	0/0:14,0:14:39.13:0,39,810	0/0:19,0:18:51.17:0,51,1034	1/1:11,4:14:28.86:308,29,0	0/1:7,0:7:37.87:38,0,57	1/1:17,12:25:56.58:594,57,0	0/1:23,0:23:79.90:80,0,121	1/1:6,5:9:25.34:265,25,0	1/1:5,10:15:41.84:510,42,0	1/1:7,6:13:26.16:304,26,0	0/0:19,0:19:54.17:0,54,1036	0/0:16,0:16:43.02:0,43,780	0/0:33,0:33:99:0,99,1940	1/1:6,10:15:43.40:569,43,0	1/1:6,7:12:31.05:343,31,0	1/1:15,6:20:39.82:502,40,0	0/0:2,0:2:0:0,0,0
chr10	57663380	.	TGTGTGA	T	2397.07	PASS	AB=0.964;AC=25;AF=0.463;AN=54;BaseQRankSum=-1.107;DP=636;FS=0.453;HRun=0;HaplotypeScore=127.5246;InbreedingCoeff=0.8408;MQ=67.63;MQ0=17;MQRankSum=-1.686;QD=9.70;ReadPosRankSum=-0.992;VQSLOD=2.2164;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:32:58.42:0,58,850	1/1:9,0:9:2.74:12,3,0	0/0:43,0:22:33.74:0,34,349	0/0:45,0:20:32.22:0,32,412	0/0:24,0:23:38.75:0,39,368	0/0:14,0:14:23.98:0,24,240	0/0:25,0:25:66.01:0,66,1090	1/1:21,0:18:10.53:337,11,0	1/1:6,1:7:11.99:100,12,0	1/1:27,0:27:61.70:457,62,0	1/1:16,0:16:20.93:168,21,0	0/0:17,0:16:42.07:0,42,579	0/0:23,0:23:56.55:0,57,1008	0/0:22,0:22:54.04:0,54,1310	1/1:26,2:28:16.73:129,17,0	0/0:24,0:24:45.04:0,45,828	0/1:26,1:27:53.55:54,0,85	1/1:21,0:21:13.72:61,14,0	1/1:17,1:16:42:469,42,0	1/1:13,0:12:32.89:261,33,0	./.	0/0:24,0:24:54.60:0,55,568	0/0:22,0:21:41.87:0,42,425	0/0:32,0:31:69.13:0,69,1475	1/1:10,1:11:5.75:81,6,0	1/1:22,0:21:37.07:405,37,0	1/1:27,0:27:14.26:75,14,0	0/0:9,0:9:3:0,3,25
chr10	57663382	.	TGTGA	T	3691.92	PASS	AB=1.000;AC=29;AF=0.537;AN=54;BaseQRankSum=-0.779;DP=636;FS=0.920;HRun=0;HaplotypeScore=106.5811;InbreedingCoeff=0.8326;MQ=65.46;MQ0=17;MQRankSum=-1.650;QD=13.05;ReadPosRankSum=-1.507;VQSLOD=3.0881;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:31:32.88:0,33,600	1/1:1,8:9:3.01:57,3,0	0/0:42,0:21:33.74:0,34,350	0/0:41,0:16:32.20:0,32,378	0/0:25,0:24:38.75:0,39,343	0/0:14,0:14:23.94:0,24,193	0/0:25,0:25:57.23:0,57,777	1/1:21,0:18:48.28:403,48,0	1/1:7,0:7:11.64:99,12,0	1/1:4,24:28:62.92:615,63,0	1/1:15,0:15:23.93:193,24,0	0/0:19,0:18:41.93:0,42,359	0/0:24,0:24:36.58:0,37,761	0/0:22,0:22:57.02:0,57,1014	1/1:2,26:28:18.06:319,18,0	0/0:24,0:24:45.03:0,45,641	1/1:27,0:27:4.89:41,5,0	1/1:0,21:21:15.05:283,15,0	1/1:19,0:17:48:445,48,0	1/1:13,0:12:32.89:261,33,0	./.	0/1:23,0:23:96.66:97,0,257	0/0:23,0:22:31.27:0,31,306	0/0:33,0:32:69.10:0,69,1076	1/1:2,9:11:6.02:93,6,0	1/1:24,0:22:59.87:535,60,0	1/1:0,27:27:16.11:251,16,0	1/1:10,0:9:0.47:1,0,0
chr10	57663384	.	TGA	T	3004.98	PASS	AB=1.000;AC=31;AF=0.574;AN=54;BaseQRankSum=1.828;DP=632;FS=9.873;HRun=0;HaplotypeScore=91.2008;InbreedingCoeff=0.7222;MQ=63.87;MQ0=17;MQRankSum=-1.736;QD=9.51;ReadPosRankSum=-1.921;VQSLOD=1.9017;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:30:29.75:0,30,424	1/1:8,0:8:2.99:24,3,0	0/0:41,0:19:34.01:0,34,352	0/0:42,0:15:32.20:0,32,378	0/0:24,0:23:38.19:0,38,302	0/1:15,0:15:3.17:3,0,123	0/0:23,0:24:25.29:0,25,506	1/1:21,0:18:41.28:414,41,0	1/1:9,0:9:12.21:100,12,0	1/1:26,0:26:62.82:504,63,0	1/1:16,0:16:26.85:210,27,0	0/1:20,0:19:23.32:23,0,127	0/0:24,0:24:58.91:0,59,562	0/0:21,0:21:27.24:0,27,648	1/1:28,0:28:17.95:144,18,0	0/0:24,0:24:37.07:0,37,425	1/1:2,22:24:15.02:204,15,0	1/1:21,0:21:14.97:122,15,0	1/1:19,0:17:50.90:428,51,0	1/1:13,0:12:32.89:261,33,0	./.	0/1:24,0:24:54.52:55,0,126	0/0:24,0:23:19.10:0,19,260	0/0:33,0:32:69.02:0,69,723	1/1:11,0:11:5.98:47,6,0	1/1:24,0:22:59.86:502,60,0	1/1:27,0:27:17.15:124,17,0	1/1:1,9:9:3.01:46,3,0
chr10	57663386	.	AGT	A	904.63	PASS	AB=0.907;AC=24;AF=0.480;AN=50;BaseQRankSum=3.091;DP=634;FS=3.110;HRun=0;HaplotypeScore=98.5069;InbreedingCoeff=0.2129;MQ=61.43;MQ0=18;MQRankSum=-1.380;QD=2.72;ReadPosRankSum=2.656;VQSLOD=1.3147;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:26.13:0,26,227	1/1:8,0:8:2.68:11,3,0	./.	0/0:43,0:15:2.96:0,3,19	0/0:14,0:23:8.30:0,8,46	1/1:8,6:14:6.02:66,6,0	0/1:22,3:25:96.44:96,0,280	0/0:24,0:21:3:0,3,27	0/0:8,0:8:2.98:0,3,23	0/1:24,0:24:17.17:18,0,17	0/0:15,0:15:0:0,0,0	0/1:10,11:20:0.84:208,0,1	0/0:21,0:23:10:0,10,293	0/0:19,2:21:5.51:0,6,443	1/1:29,0:29:15.34:67,15,0	0/1:11,1:25:9.19:9,0,152	1/1:23,0:23:14.72:98,15,0	0/1:22,0:22:6.55:39,0,7	1/1:21,0:19:6.14:30,6,0	./.	./.	0/1:15,5:23:1.05:267,0,1	1/1:18,6:23:6.49:67,6,0	0/0:11,0:33:39:0,39,358	1/1:11,0:11:5.48:24,5,0	0/1:25,0:23:5.83:6,0,22	0/1:28,0:28:12.63:29,0,13	1/1:10,0:9:2.98:22,3,0
chr10	57670414	.	AACAGACACAGCCCT	A	21603.59	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=18.399;DP=578;FS=8.464;HRun=0;HaplotypeScore=234.7521;InbreedingCoeff=0.9797;MQ=85.06;MQ0=0;MQRankSum=-16.794;QD=86.41;ReadPosRankSum=3.396;VQSLOD=3.5343;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,111,7271	1/1:0,9:9:15.05:649,15,0	0/0:22,0:22:63.17:0,63,3310	0/0:22,0:22:63.17:0,63,3637	0/0:27,0:27:78.24:0,78,4787	0/0:24,0:24:69.22:0,69,4563	0/0:26,0:26:78.27:0,78,5203	1/1:0,23:23:68.83:1844,69,0	1/1:0,23:23:39.13:1686,39,0	1/1:0,24:24:69.21:2750,69,0	1/1:0,11:11:15.05:648,15,0	0/0:29,0:29:87.28:0,87,5778	0/0:27,0:27:81.23:0,81,5328	0/0:27,0:27:81.24:0,81,5213	1/1:1,20:21:54.18:2242,54,0	0/0:17,0:17:51.18:0,51,3623	1/1:1,22:23:45.63:1855,46,0	0/0:14,0:14:42.10:0,42,2671	1/1:1,17:18:47.97:1264,48,0	1/1:0,18:18:36:1333,36,0	1/1:0,12:12:9.03:389,9,0	0/0:21,0:21:63.17:0,63,3982	0/0:14,0:14:42.12:0,42,2687	0/0:20,0:20:57.18:0,57,3618	1/1:0,12:12:33.05:1313,33,0	1/1:0,20:20:57.05:2000,57,0	1/1:0,32:32:75.26:3242,75,0	1/1:0,4:4:9.03:389,9,0
chr10	57672907	.	G	GAAA	4300.62	PASS	AB=0.948;AC=37;AF=0.661;AN=56;BaseQRankSum=4.171;DP=474;FS=7.621;HRun=15;HaplotypeScore=98.3959;InbreedingCoeff=0.4906;MQ=53.08;MQ0=12;MQRankSum=-3.580;QD=11.81;ReadPosRankSum=-4.247;VQSLOD=1.2070;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:13,18:30:21.96:327,22,0	1/1:6,0:6:15.01:177,15,0	0/1:10,0:4:9.17:9,0,12	0/0:10,0:3:2.46:0,2,15	1/1:11,5:17:12.87:127,13,0	0/1:13,0:18:4.14:4,0,120	0/0:15,0:15:14.31:0,14,171	1/1:17,0:12:12.76:177,13,0	1/1:18,0:17:12.04:162,12,0	1/1:15,0:15:23.48:231,23,0	1/1:15,0:15:30.56:354,31,0	0/1:19,0:23:29.68:30,0,110	0/0:12,0:13:0.83:0,1,134	0/1:15,0:15:14.30:14,0,19	1/1:21,0:20:24.42:314,24,0	0/0:17,0:17:21.06:0,21,192	1/1:26,0:26:9.69:418,10,0	0/0:18,0:18:10.73:0,11,157	1/1:15,0:12:18.20:214,18,0	1/1:17,0:17:34.91:359,35,0	1/1:10,0:10:15.04:168,15,0	0/1:22,0:23:52.68:65,0,53	0/0:11,0:13:14.64:0,15,140	0/0:17,0:18:6.09:0,6,212	1/1:13,1:14:29.96:321,30,0	1/1:27,0:26:47.31:504,47,0	1/1:18,0:20:18.56:294,19,0	1/1:1,0:1:3.01:34,3,0
chr10	57672918	.	A	AAAG	5743.89	PASS	AB=0.856;AC=30;AF=0.536;AN=56;BaseQRankSum=-9.017;DP=517;FS=7.681;HRun=0;HaplotypeScore=87.3807;InbreedingCoeff=0.4898;MQ=55.81;MQ0=9;MQRankSum=0.194;QD=17.46;ReadPosRankSum=2.843;VQSLOD=3.7582;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:27:53.72:109,0,54	1/1:1,6:7:17.52:238,18,0	0/1:17,0:6:9.36:9,0,30	0/1:16,0:5:0.40:0,0,33	0/1:14,0:14:17.67:18,0,37	0/0:19,0:19:38.71:0,39,365	0/0:20,0:18:43.49:0,43,437	1/1:2,18:21:54.92:597,55,0	1/1:2,13:17:0.04:215,0,0	1/1:3,9:13:1.26:362,1,0	1/1:1,13:14:26.67:511,27,0	0/0:26,0:26:55.87:0,56,470	0/0:15,0:15:38.43:0,38,376	0/0:13,0:13:37.21:0,37,280	1/1:5,18:23:2.52:319,3,0	0/0:20,0:18:44.90:0,45,480	1/1:3,21:28:23.46:674,23,0	0/0:18,0:16:38.25:0,38,372	1/1:5,17:22:3.58:448,4,0	1/1:4,14:20:2.04:429,2,0	1/1:2,8:11:20.99:314,21,0	0/0:23,0:23:43.06:0,43,350	0/0:13,0:13:23.97:0,24,269	0/0:21,0:21:52.31:0,52,576	1/1:4,13:17:20.13:437,20,0	1/1:3,22:25:50.50:856,51,0	0/1:7,14:24:32.08:155,0,32	0/1:1,4:5:4.12:52,0,4
chr10	57674039	.	GGT	G	565.96	PASS	AB=0.974;AC=28;AF=0.667;AN=42;BaseQRankSum=3.425;DP=482;FS=6.944;HRun=0;HaplotypeScore=75.6531;InbreedingCoeff=0.2290;MQ=72.76;MQ0=13;MQRankSum=0.138;QD=2.17;ReadPosRankSum=0.900;VQSLOD=0.6313;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	1/1:6,1:8:5.85:46,6,0	./.	./.	1/1:15,2:17:3.48:33,3,0	0/0:20,0:20:12.02:0,12,156	0/1:22,0:23:5.42:5,0,46	0/0:27,0:24:0:0,0,0	1/1:12,1:12:3:32,3,0	./.	1/1:13,0:13:0.47:1,0,0	0/0:16,0:16:15.02:0,15,181	0/0:11,0:11:3.01:0,3,44	0/1:14,0:14:41.10:41,0,77	1/1:16,0:16:2.99:24,3,0	0/1:14,1:15:61.77:62,0,103	1/1:22,5:29:9.90:117,10,0	0/0:21,0:22:17.54:0,18,145	1/1:13,1:13:3.01:32,3,0	1/1:5,3:8:3.01:32,3,0	1/1:27,3:30:2.90:32,3,0	./.	0/1:16,0:15:26.05:26,0,38	./.	./.	1/1:19,0:19:3:32,3,0	1/1:15,2:16:12.02:120,12,0	1/1:7,2:7:6.01:64,6,0
chr10	57674378	.	AAAG	A	661.77	PASS	AB=0.889;AC=17;AF=0.354;AN=48;BaseQRankSum=-2.972;DP=384;FS=1.067;HRun=0;HaplotypeScore=64.4846;InbreedingCoeff=0.6677;MQ=55.81;MQ0=15;MQRankSum=3.046;QD=5.61;ReadPosRankSum=3.656;VQSLOD=1.3784;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:17,4:22:20.53:219,21,0	0/0:4,0:6:5.98:0,6,58	./.	./.	0/0:17,0:16:3.01:0,3,55	1/1:7,2:9:3.01:37,3,0	./.	./.	0/0:15,0:14:16.30:0,16,264	0/0:13,0:13:11.11:0,11,117	0/0:11,0:11:8.90:0,9,70	1/1:5,0:5:2.98:37,3,0	0/0:11,0:11:15.05:0,15,262	1/1:7,0:14:2.99:23,3,0	0/0:16,0:16:18.06:0,18,262	1/1:7,5:13:11.98:132,12,0	0/0:17,0:18:14.88:0,15,131	1/1:17,0:16:8.95:69,9,0	0/0:13,0:14:11.92:0,12,115	0/0:14,0:15:19.62:0,20,221	0/0:10,0:11:4.83:0,5,51	1/1:12,1:13:4.83:92,5,0	0/1:7,1:8:10.81:32,0,11	1/1:7,10:15:15.05:187,15,0	0/0:11,0:17:23.67:0,24,203	0/0:12,0:11:18.06:0,18,235	0/0:17,0:18:11.91:0,12,96	0/0:10,0:9:15.02:0,15,195
chr10	57674449	.	AGCC	A	10051.15	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-0.963;DP=546;FS=1.223;HRun=0;HaplotypeScore=81.0877;InbreedingCoeff=0.9770;MQ=65.19;MQ0=13;MQRankSum=-0.891;QD=30.46;ReadPosRankSum=2.603;VQSLOD=5.2618;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:30:70.55:0,71,988	1/1:12,0:11:19.42:280,19,0	0/0:16,0:11:9.11:0,9,439	0/0:12,0:10:14.84:0,15,332	0/0:16,0:15:45.11:0,45,718	0/0:11,0:11:26.88:0,27,401	0/0:17,0:16:45.15:0,45,699	1/1:3,17:18:45.11:623,45,0	1/1:23,0:23:42.31:728,42,0	1/1:15,1:16:37.62:607,38,0	1/1:17,0:16:33.11:510,33,0	0/0:13,0:12:28.64:0,29,392	0/0:17,0:17:51:0,51,876	0/0:20,0:20:41.97:0,42,628	1/1:21,0:21:41.15:694,41,0	0/0:14,0:14:35.36:0,35,443	1/1:29,1:29:78.25:1136,78,0	1/1:2,25:27:8.99:103,9,0	1/1:16,2:17:36.08:508,36,0	1/1:23,0:23:50.42:771,50,0	1/1:21,0:21:57.19:862,57,0	0/0:9,0:9:23.86:0,24,345	0/0:14,0:14:16.79:0,17,355	0/0:26,0:26:61.21:0,61,823	1/1:25,1:26:66.08:866,66,0	1/1:26,0:26:54.18:804,54,0	1/1:31,1:30:84:1126,84,0	1/1:17,0:16:15.59:433,16,0
chr10	57676309	.	A	AAGAGAGAG	2360.61	PASS	AB=1.000;AC=33;AF=0.635;AN=52;BaseQRankSum=-0.821;DP=559;FS=8.040;HRun=0;HaplotypeScore=153.8608;InbreedingCoeff=0.8017;MQ=56.23;MQ0=16;MQRankSum=-3.554;QD=7.00;ReadPosRankSum=-4.491;VQSLOD=0.1230;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:24:10.26:180,10,0	1/1:10,0:10:5.02:47,5,0	./.	0/1:34,0:15:0:0,0,0	1/1:19,1:20:8.77:171,9,0	0/0:24,0:25:23.95:0,24,368	0/0:22,0:23:24.02:0,24,365	1/1:36,0:36:18.93:152,19,0	1/1:12,0:20:0.09:95,0,0	1/1:21,0:18:11.46:99,11,0	1/1:10,0:10:3.01:94,3,0	0/0:17,0:17:18.05:0,18,398	0/0:11,0:11:14.64:0,15,287	0/0:14,0:17:30.05:0,30,520	1/1:10,11:22:12.04:490,12,0	0/0:9,0:19:24.55:0,25,445	1/1:25,0:25:13.48:116,13,0	1/1:13,0:13:17.92:145,18,0	1/1:21,0:19:7.83:53,8,0	./.	1/1:12,0:12:8.54:82,9,0	0/0:20,0:20:24.47:0,24,519	0/0:15,0:16:20.63:0,21,376	0/0:23,0:24:36.05:0,36,805	1/1:18,0:18:12.01:180,12,0	1/1:22,0:22:24:420,24,0	1/1:19,0:19:16.78:201,17,0	1/1:10,0:8:4.76:29,5,0
chr10	57678049	.	GTGTA	G	6785.69	PASS	AB=0.929;AC=28;AF=0.538;AN=52;BaseQRankSum=12.522;DP=937;FS=2.852;HRun=0;HaplotypeScore=162.5387;InbreedingCoeff=0.8107;MQ=56.61;MQ0=12;MQRankSum=2.250;QD=13.10;ReadPosRankSum=1.132;VQSLOD=4.5036;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:22,27:50:47.90:740,48,0	0/0:11,0:11:21.07:0,21,427	./.	./.	1/1:21,16:37:33.11:510,33,0	0/0:26,0:27:36.12:0,36,794	0/1:23,3:26:50.45:50,0,675	0/0:40,0:39:17.76:0,18,116	1/1:19,7:33:36.12:530,36,0	1/1:11,19:30:56.81:856,57,0	1/1:14,5:19:9.03:139,9,0	0/0:37,1:38:7.82:0,8,981	0/0:23,0:40:30.10:0,30,519	0/0:33,1:34:10.09:0,10,1111	0/1:47,2:49:11.33:11,0,1605	1/1:14,1:36:10.45:123,10,0	0/0:30,0:30:54.17:0,54,1119	0/0:25,0:25:39.08:0,39,720	1/1:14,11:24:33.06:460,33,0	1/1:9,15:24:27.09:417,27,0	1/1:28,39:67:75.25:1157,75,0	0/0:26,0:26:51.15:0,51,1067	0/0:35,0:35:48.16:0,48,1104	0/0:39,0:39:66.21:0,66,1460	1/1:13,15:28:30.10:463,30,0	1/1:21,15:38:51.15:725,51,0	1/1:24,11:35:26.99:416,27,0	1/1:15,5:20:12.04:185,12,0
chr10	57678321	.	C	CT	142.18	PASS	AB=0.545;AC=1;AF=0.018;AN=56;BaseQRankSum=-0.900;DP=434;FS=2.822;HRun=9;HaplotypeScore=44.0615;InbreedingCoeff=-0.0119;MQ=72.15;MQ0=0;MQRankSum=-0.977;QD=11.85;ReadPosRankSum=-0.497;VQSLOD=2.2179;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:65.54:0,66,615	0/0:13,0:13:29.95:0,30,257	0/0:10,0:10:17.73:0,18,141	0/0:6,0:6:9:0,9,78	0/0:16,0:16:38.99:0,39,339	0/0:17,0:17:37.84:0,38,304	0/0:7,0:7:17.99:0,18,156	0/0:26,0:26:65.47:0,65,556	0/0:14,0:14:41.99:0,42,365	0/0:17,0:17:41.94:0,42,358	0/0:14,0:14:35.98:0,36,310	0/0:15,0:15:38.91:0,39,329	0/0:13,0:13:35.98:0,36,313	0/0:8,0:8:14.97:0,15,130	0/0:18,0:18:35.95:0,36,313	0/0:10,0:10:17.98:0,18,156	0/0:23,0:22:50.96:0,51,442	0/1:2,9:12:22.20:217,0,22	0/0:16,0:16:35.96:0,36,306	0/0:13,0:13:35.99:0,36,310	0/0:14,0:14:23.97:0,24,208	0/0:13,0:13:35.01:0,35,287	0/0:18,0:18:47.97:0,48,412	0/0:15,0:15:41.98:0,42,365	0/0:21,0:21:35.62:0,36,471	0/0:20,1:21:23.76:0,24,426	0/0:22,0:22:53.96:0,54,469	0/0:16,0:16:47.99:0,48,416
chr10	57679070	.	ATACC	A	12809.28	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=16.233;DP=695;FS=18.795;HRun=0;HaplotypeScore=117.8042;InbreedingCoeff=0.9693;MQ=85.13;MQ0=2;MQRankSum=-6.234;QD=39.17;ReadPosRankSum=2.268;VQSLOD=3.8034;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,111,2875	1/1:1,2:3:6.02:110,6,0	0/0:22,0:22:51.16:0,51,1204	0/0:25,0:25:66.23:0,66,1677	0/0:21,0:21:63.22:0,63,1662	0/0:19,0:19:54.19:0,54,1358	0/0:31,0:31:81.26:0,81,2083	1/1:5,12:17:33.10:563,33,0	1/1:1,28:28:75.26:1380,75,0	1/1:3,30:33:93.30:1672,93,0	1/1:0,8:8:21.07:366,21,0	0/0:42,0:42:99:0,120,3109	0/0:25,0:25:72.25:0,72,1853	0/0:43,0:43:99:0,126,3249	1/1:5,20:24:57.20:1048,57,0	0/0:33,0:32:90.30:0,90,2255	1/1:3,28:31:66.23:1212,66,0	1/1:2,24:25:57.15:1013,57,0	1/1:0,15:15:42.05:640,42,0	1/1:1,6:7:6.02:110,6,0	1/1:5,63:68:99:2083,120,0	0/0:15,0:15:39.09:0,39,951	0/0:17,0:17:51.17:0,51,1281	0/0:33,0:33:87.20:0,87,2072	1/1:2,15:17:24.04:406,24,0	1/1:0,20:20:60.16:1039,60,0	1/1:1,19:20:48.16:836,48,0	1/1:2,6:8:18.06:330,18,0
chr10	57679243	.	G	GA	2998.65	PASS	AB=0.751;AC=27;AF=0.482;AN=56;BaseQRankSum=0.794;DP=514;FS=10.873;HRun=13;HaplotypeScore=71.0036;InbreedingCoeff=0.6143;MQ=55.66;MQ0=5;MQRankSum=-1.580;QD=11.19;ReadPosRankSum=-3.976;VQSLOD=1.0700;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:70.98:0,71,474	0/1:3,7:10:2.62:108,0,3	0/1:19,0:5:11.19:11,0,37	0/0:14,0:5:5.89:0,6,37	0/0:13,0:13:23.41:0,23,155	0/0:17,1:19:9.81:0,10,203	0/0:15,1:18:6.21:0,6,157	1/1:18,12:29:53.47:446,53,0	1/1:6,7:14:5.19:78,5,0	1/1:7,7:15:24.02:217,24,0	0/1:9,5:14:11.21:176,0,11	0/0:24,0:25:29.97:0,30,285	0/0:15,0:16:20.05:0,20,213	0/0:25,0:25:25.08:0,25,265	1/1:8,9:15:29.99:269,30,0	0/0:12,0:12:27.18:0,27,185	1/1:12,12:24:48.54:407,49,0	1/1:1,0:13:17.65:94,18,0	0/1:15,9:24:27.34:165,0,27	1/1:9,3:12:22.57:194,23,0	1/1:3,6:9:10.37:86,10,0	0/0:15,0:16:23.96:0,24,230	0/0:17,0:17:26.79:0,27,193	0/0:26,0:27:37.80:0,38,268	1/1:4,18:22:30.92:281,31,0	1/1:15,5:20:22.96:327,23,0	0/1:6,4:10:25.79:61,0,26	1/1:2,10:12:15.46:286,15,0
chr10	57679401	.	C	CT	3504.93	PASS	AB=0.819;AC=27;AF=0.482;AN=56;BaseQRankSum=8.916;DP=505;FS=16.896;HRun=9;HaplotypeScore=92.1399;InbreedingCoeff=0.6022;MQ=64.63;MQ0=1;MQRankSum=-1.687;QD=12.75;ReadPosRankSum=-2.550;VQSLOD=1.2506;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:27,2:29:42.55:43,0,166	1/1:2,2:4:12.03:129,12,0	0/0:14,1:13:29.96:0,30,252	0/0:18,0:15:31.77:0,32,249	0/1:22,0:22:25.52:26,0,113	0/0:19,0:19:50.98:0,51,443	0/0:21,0:21:35.45:0,35,378	1/1:15,17:32:51.80:639,52,0	0/1:6,3:9:39.99:51,0,40	0/1:9,4:13:33.04:126,0,33	1/1:4,5:8:10.69:108,11,0	0/0:30,0:30:83.98:0,84,729	0/0:10,0:10:26.99:0,27,234	0/0:21,0:21:21.33:0,21,410	1/1:4,14:18:27.02:275,27,0	0/0:13,0:13:25.04:0,25,126	1/1:6,15:20:12.55:363,13,0	0/0:7,0:24:31.88:0,32,93	0/1:10,11:21:11.03:326,0,11	1/1:9,9:18:29.38:280,29,0	1/1:7,13:20:20.03:315,20,0	0/0:18,0:18:44.97:0,45,389	0/0:15,0:16:37.79:0,38,314	0/0:25,0:25:71.98:0,72,625	1/1:11,5:16:15.71:220,16,0	1/1:9,9:18:27.06:239,27,0	1/1:12,5:17:11.80:217,12,0	1/1:1,5:6:3.27:149,3,0
chr10	57679429	.	CT	C	217.89	PASS	AC=2;AF=0.037;AN=54;BaseQRankSum=2.114;DP=483;FS=20.652;HRun=8;HaplotypeScore=101.0737;InbreedingCoeff=0.8238;MQ=56.28;MQ0=6;MQRankSum=-1.624;QD=9.47;ReadPosRankSum=-1.915;VQSLOD=0.3759;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:96.28:0,96,1139	./.	0/0:12,0:6:11.62:0,12,113	0/0:25,1:14:9.69:0,10,283	0/0:15,0:15:39.11:0,39,456	0/0:22,0:22:60.18:0,60,725	0/0:19,0:19:45.14:0,45,544	0/0:36,0:33:75.15:0,75,838	0/0:9,0:9:23.99:0,24,243	0/0:17,0:17:33.06:0,33,366	0/0:10,0:9:23.85:0,24,229	0/0:27,0:27:66.20:0,66,797	0/0:9,0:9:24.07:0,24,290	0/0:20,0:20:48.15:0,48,580	0/0:26,0:26:63.14:0,63,714	0/0:15,0:15:33.10:0,33,399	0/0:25,0:24:51.07:0,51,565	1/1:11,12:23:33.03:312,33,0	0/0:19,0:17:36.08:0,36,412	0/0:9,0:9:18.01:0,18,199	0/0:19,0:19:42.12:0,42,490	0/0:15,0:15:33.10:0,33,399	0/0:9,0:9:21.06:0,21,254	0/0:24,0:24:56.66:0,57,818	0/0:10,0:10:24.03:0,24,269	0/0:15,0:15:42.13:0,42,498	0/0:14,0:14:38.93:0,39,389	0/0:4,0:4:5.99:0,6,57
chr10	57679831	.	G	GA	14307.52	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-13.847;DP=619;FS=4.552;HRun=0;HaplotypeScore=57.5879;InbreedingCoeff=0.9987;MQ=68.04;MQ0=0;MQRankSum=-1.075;QD=43.36;ReadPosRankSum=-1.124;VQSLOD=4.8682;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:78.23:0,78,1069	1/1:0,11:11:33.11:527,33,0	0/0:8,0:8:17.85:0,18,249	0/0:18,0:18:41.70:0,42,503	0/0:19,0:19:57.19:0,57,797	0/0:16,0:16:48.16:0,48,671	0/0:30,0:30:90.30:0,90,1258	1/1:2,22:24:66.22:1048,66,0	1/1:0,28:28:81.28:1292,81,0	1/1:0,19:19:54.16:837,54,0	1/1:0,14:15:42.14:672,42,0	0/0:28,0:28:81.24:0,81,1111	0/0:35,0:35:99:0,102,1422	0/0:28,0:28:81.27:0,81,1132	1/1:1,28:29:81.28:1295,81,0	0/0:16,0:16:48.16:0,48,671	1/1:0,30:30:90.31:1439,90,0	1/1:1,18:19:42.14:671,42,0	1/1:0,25:25:75.19:1145,75,0	1/1:0,18:18:54.18:862,54,0	1/1:2,43:45:99:1698,108,0	0/0:12,0:12:36.12:0,36,503	0/0:13,0:13:36.12:0,36,503	0/0:38,0:38:99:0,111,1529	1/1:2,15:17:42.14:671,42,0	1/1:0,19:19:54.09:856,54,0	1/1:1,18:19:51.17:814,51,0	1/1:0,12:12:30.10:480,30,0
chr10	57681394	.	T	TG	181.81	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.256;DP=497;FS=0.758;HRun=0;HaplotypeScore=113.3671;InbreedingCoeff=0.7040;MQ=56.15;MQ0=5;MQRankSum=-5.303;QD=9.57;ReadPosRankSum=3.416;VQSLOD=3.6481;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:18:39.63:0,40,234	0/0:4,0:4:9.64:0,10,59	0/0:22,0:11:2.39:0,2,135	0/0:11,0:4:11.45:0,11,75	0/0:20,0:20:43.14:0,43,305	0/0:9,0:9:21.04:0,21,243	0/0:16,0:16:41.93:0,42,352	0/0:31,0:28:75.83:0,76,550	0/0:19,0:19:37.41:0,37,253	0/0:22,0:22:55.19:0,55,487	0/0:16,0:16:36.89:0,37,267	0/0:16,0:16:30.16:0,30,321	0/0:13,0:13:32.34:0,32,342	0/0:8,0:8:23.97:0,24,260	0/0:15,0:15:30.21:0,30,169	0/0:12,0:12:35.93:0,36,355	0/0:22,0:20:38.12:0,38,251	1/1:13,6:18:39.49:276,39,0	0/0:24,0:23:58.29:0,58,412	0/0:28,0:28:74.36:0,74,458	0/0:11,0:11:16.18:0,16,105	0/0:16,0:16:46.22:0,46,457	0/0:20,0:20:53.06:0,53,607	0/0:16,0:16:5.73:0,6,246	0/0:29,0:29:79.60:0,80,495	0/0:22,0:22:53.36:0,53,373	0/0:26,0:26:49.53:0,50,292	0/0:11,0:11:26.64:0,27,173
chr10	57681398	.	T	TTG	279.36	PASS	AB=0.979;AC=4;AF=0.071;AN=56;BaseQRankSum=3.463;DP=498;FS=11.356;HRun=0;HaplotypeScore=122.6613;InbreedingCoeff=0.4376;MQ=52.57;MQ0=7;MQRankSum=-2.642;QD=4.58;ReadPosRankSum=4.895;VQSLOD=1.6323;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:19,0:18:65.44:77,0,65	0/0:4,0:4:8.91:0,9,72	0/0:23,0:9:23.15:0,23,166	0/0:12,0:3:8.15:0,8,55	0/0:20,0:20:7.04:0,7,227	0/0:9,0:9:18.03:0,18,201	0/0:15,0:15:38.83:0,39,315	0/0:35,0:32:81.72:0,82,703	0/0:19,0:19:43.07:0,43,320	0/0:23,0:23:53.68:0,54,380	0/0:16,0:16:36.69:0,37,265	0/0:16,0:16:47.61:0,48,405	0/0:12,0:12:34.62:0,35,327	0/0:9,0:9:23.23:0,23,243	0/0:16,0:16:36.87:0,37,252	0/0:12,0:12:32.90:0,33,331	0/1:22,0:21:1.46:1,0,291	1/1:12,6:18:12.82:302,13,0	0/0:24,0:23:57.45:0,57,388	0/0:26,0:26:67.71:0,68,604	0/0:10,0:10:22.32:0,22,161	0/0:15,0:15:44.90:0,45,449	0/0:21,0:21:55.25:0,55,604	0/0:15,0:15:28.66:0,29,286	0/0:28,0:28:79.61:0,80,639	0/0:21,0:21:53.65:0,54,423	0/0:24,0:24:57.22:0,57,407	0/0:11,0:11:29.95:0,30,262
chr10	57681400	.	T	TG	5593.39	PASS	AB=0.600;AC=29;AF=0.518;AN=56;BaseQRankSum=-4.781;DP=493;FS=21.191;HRun=0;HaplotypeScore=96.3748;InbreedingCoeff=0.8926;MQ=52.02;MQ0=7;MQRankSum=-1.583;QD=18.90;ReadPosRankSum=2.773;VQSLOD=4.8647;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:19:44.14:0,44,234	1/1:1,2:3:7.84:79,8,0	0/0:22,0:8:20.21:0,20,151	0/0:12,0:3:8.34:0,8,48	0/0:20,0:20:42.97:0,43,295	0/0:8,0:8:15.02:0,15,183	0/0:14,0:14:35.63:0,36,251	1/1:11,21:29:0.66:520,1,0	1/1:10,8:19:42.54:420,43,0	1/1:14,7:22:26.70:355,27,0	1/1:8,7:15:29.35:275,29,0	0/0:16,0:16:38.14:0,38,354	0/0:12,0:12:29.25:0,29,309	0/0:8,0:8:22.56:0,23,237	1/1:7,9:16:33.83:387,34,0	0/0:12,0:12:32.43:0,32,309	1/1:13,8:19:27.41:415,27,0	1/1:21,0:20:30.19:179,30,0	1/1:18,5:23:12.22:284,12,0	1/1:14,12:27:48.61:608,49,0	1/1:6,4:10:18.69:185,19,0	0/0:16,0:16:43.21:0,43,428	0/0:21,0:21:56.48:0,56,625	0/0:15,0:16:29.19:0,29,269	1/1:11,18:28:76.83:753,77,0	1/1:15,9:24:21.47:435,21,0	1/1:13,11:24:23.92:485,24,0	0/1:3,6:9:2.38:214,0,2
chr10	57681407	.	TG	T	268.59	PASS	AB=0.958;AC=6;AF=0.107;AN=56;BaseQRankSum=6.306;DP=490;FS=0.000;HRun=1;HaplotypeScore=112.6088;InbreedingCoeff=0.5426;MQ=47.92;MQ0=8;MQRankSum=-4.628;QD=4.26;ReadPosRankSum=0.842;VQSLOD=0.1744;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:21:1.63:0,2,475	0/0:6,0:6:17.94:0,18,211	1/1:17,1:5:3.16:18,3,0	0/1:10,1:3:12.64:22,0,13	0/0:23,0:23:22.94:0,23,462	0/0:8,0:8:16.87:0,17,232	0/0:14,0:14:33.06:0,33,418	0/0:34,0:31:90.12:0,90,1247	0/0:21,0:21:53.50:0,54,681	0/0:21,0:21:60.10:0,60,826	0/0:16,0:15:42.05:0,42,584	0/0:16,0:16:25.98:0,26,271	0/1:11,0:11:1.27:1,0,178	0/0:7,0:7:20.65:0,21,244	0/0:15,0:15:39.10:0,39,560	0/0:8,0:8:10.75:0,11,193	0/0:19,0:17:47.80:0,48,648	1/1:13,9:20:40.12:344,40,0	0/0:25,1:25:65.81:0,66,778	0/0:27,0:27:77.66:0,78,1060	0/0:11,0:11:23.67:0,24,312	0/0:15,0:15:33.01:0,33,422	0/0:21,0:21:51.41:0,51,760	0/0:17,0:17:27.26:0,27,316	0/0:28,1:28:71.45:0,71,1051	0/0:21,0:21:63.21:0,63,904	0/0:21,0:21:49.73:0,50,674	0/0:9,0:9:24.08:0,24,362
chr10	57681408	.	G	GT	121.50	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=7.083;DP=494;FS=0.778;HRun=3;HaplotypeScore=116.1150;InbreedingCoeff=0.6296;MQ=47.64;MQ0=8;MQRankSum=-4.085;QD=3.47;ReadPosRankSum=2.413;VQSLOD=0.3992;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:20:13.67:0,14,405	0/0:6,0:6:18.05:0,18,210	0/0:20,0:5:5.47:0,5,24	0/1:11,0:3:4.18:4,0,11	0/0:24,0:24:21.03:0,21,405	0/0:8,0:8:17.79:0,18,192	0/0:14,0:14:30.07:0,30,336	0/0:34,0:31:77.83:0,78,887	0/0:21,0:21:53.66:0,54,584	0/0:22,0:22:60.17:0,60,687	0/0:16,0:15:42.12:0,42,493	0/0:17,0:17:19.25:0,19,243	0/0:11,0:11:14.45:0,14,204	0/0:7,0:7:20.96:0,21,213	0/0:15,0:15:39.12:0,39,456	0/0:7,0:7:19.57:0,20,187	0/0:19,0:17:48.08:0,48,536	1/1:19,4:21:24.68:214,25,0	0/0:25,0:24:64.23:0,64,664	0/0:27,0:27:71.82:0,72,812	0/0:11,0:11:11.77:0,12,168	0/0:14,0:14:33.03:0,33,367	0/0:21,0:21:57.08:0,57,651	0/0:17,0:17:29.61:0,30,280	0/0:29,0:28:64.59:0,65,828	0/0:21,0:21:63.18:0,63,730	0/0:23,0:23:50.40:0,50,565	0/0:9,0:9:24.07:0,24,288
chr10	57681429	.	GTTTTT	G	4666.53	PASS	AB=0.755;AC=24;AF=0.429;AN=56;BaseQRankSum=-0.696;DP=515;FS=4.923;HRun=18;HaplotypeScore=131.3417;InbreedingCoeff=0.5498;MQ=48.04;MQ0=10;MQRankSum=-3.383;QD=15.61;ReadPosRankSum=3.836;VQSLOD=0.9155;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:38.82:0,39,506	1/1:4,3:7:11.73:159,12,0	0/0:18,0:2:3.01:0,3,35	0/0:16,0:3:6.02:0,6,71	0/0:19,0:32:43.45:0,43,581	0/0:11,0:12:28.91:0,29,488	0/0:10,0:11:21.07:0,21,452	0/1:14,7:20:4.26:363,0,4	1/1:10,9:20:23.46:332,23,0	1/1:13,10:24:25.40:335,25,0	1/1:7,6:15:23.70:318,24,0	0/0:17,0:19:33.11:0,33,603	0/0:10,0:10:27.09:0,27,487	0/0:10,0:10:24.04:0,24,344	1/1:4,12:16:26.83:372,27,0	0/0:9,0:9:24.07:0,24,389	1/1:12,8:19:13.99:180,14,0	0/1:20,0:18:18.64:19,0,82	0/1:13,7:17:41.95:239,0,42	0/1:16,12:30:52.36:539,0,52	0/1:8,6:14:58:100,0,58	0/0:16,0:17:27:0,27,440	0/0:17,0:20:40.59:0,41,639	0/0:17,0:18:21.02:0,21,355	0/1:15,11:27:6.78:449,0,7	1/1:10,15:26:42.53:567,43,0	1/1:17,8:25:34.29:440,34,0	1/1:5,3:10:22.93:255,23,0
chr10	57682704	.	GT	G	167.88	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.335;DP=724;FS=0.000;HRun=1;HaplotypeScore=95.2019;InbreedingCoeff=0.9901;MQ=84.17;MQ0=0;MQRankSum=0.381;QD=23.98;ReadPosRankSum=0.274;VQSLOD=3.4505;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,111,1768	0/0:13,0:13:36.12:0,36,575	0/0:17,0:18:24.74:0,25,570	0/0:26,0:26:66.80:0,67,1024	0/0:19,0:19:57.16:0,57,844	0/0:20,0:20:54.18:0,54,860	0/0:27,0:26:81.26:0,81,1271	0/0:28,0:28:84.29:0,84,1343	0/0:29,0:29:87.30:0,87,1390	0/0:38,0:38:99:0,114,1801	0/0:28,0:28:81.28:0,81,1295	0/0:39,0:39:99:0,117,1869	0/0:33,0:33:99:0,99,1533	0/0:19,0:19:57.19:0,57,911	0/0:45,0:45:99:0,135,2153	0/0:23,0:23:69.22:0,69,1080	0/0:20,0:20:60.20:0,60,959	1/1:0,7:7:21.07:260,21,0	0/0:22,0:22:63.10:0,63,951	0/0:29,0:29:87.27:0,87,1344	0/0:34,0:34:99:0,102,1606	0/0:28,0:28:81.28:0,81,1294	0/0:24,0:24:72.25:0,72,1146	0/0:21,0:21:63.21:0,63,1007	0/0:19,0:19:57.18:0,57,889	0/0:30,0:30:90.30:0,90,1416	0/0:40,0:40:99:0,120,1849	0/0:7,0:7:21.04:0,21,310
chr10	57683944	.	G	GA	4479.38	PASS	AB=0.571;AC=27;AF=0.482;AN=56;BaseQRankSum=-4.435;DP=420;FS=3.983;HRun=8;HaplotypeScore=50.9460;InbreedingCoeff=0.9374;MQ=58.88;MQ0=7;MQRankSum=-2.480;QD=22.97;ReadPosRankSum=-2.473;VQSLOD=4.2945;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:66.04:0,66,606	1/1:1,6:6:15.04:173,15,0	0/0:17,0:10:26.93:0,27,234	0/0:13,0:6:14.96:0,15,131	0/0:32,0:32:90.04:0,90,819	0/0:14,0:14:39.01:0,39,357	0/0:17,0:17:48.03:0,48,439	1/1:11,17:27:51.06:549,51,0	1/1:4,6:10:23.27:238,23,0	1/1:3,14:17:42.12:484,42,0	1/1:1,12:13:27.05:298,27,0	0/0:10,0:10:27.01:0,27,247	0/0:6,0:6:15.01:0,15,137	0/0:10,0:10:17.99:0,18,161	0/1:3,9:12:3.40:218,0,3	0/0:18,0:18:39.01:0,39,357	1/1:6,8:13:21.03:228,21,0	0/0:10,0:10:20.99:0,21,186	1/1:1,12:13:36:377,36,0	1/1:4,13:17:30.05:331,30,0	1/1:3,7:9:18.05:208,18,0	0/0:19,0:19:57.03:0,57,521	0/0:9,0:9:24.01:0,24,220	0/0:27,0:27:62.81:0,63,548	1/1:3,10:13:30.08:340,30,0	1/1:2,20:22:56.32:604,56,0	1/1:4,8:12:24.02:259,24,0	1/1:2,5:6:15.04:173,15,0
chr10	57685104	.	C	CT	6027.07	PASS	AB=0.662;AC=29;AF=0.518;AN=56;BaseQRankSum=-10.635;DP=594;FS=2.138;HRun=12;HaplotypeScore=65.5161;InbreedingCoeff=0.6405;MQ=78.64;MQ0=1;MQRankSum=0.205;QD=15.45;ReadPosRankSum=0.477;VQSLOD=5.7975;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,21:31:40.86:532,41,0	1/1:2,12:15:13.31:322,13,0	0/0:20,0:19:18.29:0,18,114	0/0:14,0:13:12.78:0,13,88	0/1:12,15:30:31.24:364,0,31	0/0:27,1:28:42.37:0,42,472	0/0:13,0:15:30.84:0,31,209	1/1:12,10:22:11.13:265,11,0	1/1:3,22:26:32.02:459,32,0	1/1:9,19:28:13.25:445,13,0	1/1:5,20:25:29.13:436,29,0	0/0:15,0:17:27.85:0,28,187	0/0:21,1:22:21.48:0,21,317	0/0:13,0:13:32.79:0,33,241	0/1:8,19:27:8.64:410,0,9	0/0:23,0:23:46.69:0,47,334	1/1:5,16:23:22.82:350,23,0	0/1:5,10:16:7.64:241,0,8	1/1:6,15:20:45.07:438,45,0	1/1:4,24:29:22.05:507,22,0	0/1:10,4:17:6.51:178,0,7	0/0:19,0:20:43.70:0,44,308	0/0:16,1:17:6.58:0,7,212	0/0:12,0:14:39.84:0,40,272	1/1:8,19:29:16.15:337,16,0	1/1:6,10:17:16.98:310,17,0	1/1:7,14:21:33.05:321,33,0	0/1:7,5:13:22.95:110,0,23
chr10	57685873	.	CCATTCATT	C	8609.25	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=7.518;DP=642;FS=8.694;HRun=0;HaplotypeScore=175.7017;InbreedingCoeff=0.9461;MQ=65.12;MQ0=4;MQRankSum=-9.654;QD=28.99;ReadPosRankSum=2.038;VQSLOD=3.8857;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:43:73.13:0,73,2222	1/1:5,6:11:15.05:380,15,0	0/0:15,0:9:9.01:0,9,225	0/0:25,0:22:15.05:0,15,502	0/0:10,0:12:24.08:0,24,717	0/0:25,0:25:51.18:0,51,1984	0/0:24,0:24:45.15:0,45,1761	1/1:17,7:24:21.07:337,21,0	1/1:7,22:29:48.16:1199,48,0	1/1:8,12:20:33.11:759,33,0	1/1:10,7:17:12.04:304,12,0	0/0:30,0:30:57.18:0,57,2066	0/0:17,0:17:33.11:0,33,1339	0/0:26,0:27:54.17:0,54,2052	1/1:10,17:27:48.16:1217,48,0	0/0:14,0:31:57.04:0,57,1703	1/1:9,17:27:45.15:1121,45,0	0/0:10,0:23:39.12:0,39,1136	1/1:11,5:15:15.03:327,15,0	1/1:14,14:28:33.11:837,33,0	1/1:19,0:19:3.01:76,3,0	0/0:17,0:18:33.10:0,33,1186	0/0:18,0:18:36.12:0,36,1365	0/0:36,0:37:84.23:0,84,2612	1/1:10,3:14:15.05:360,15,0	1/1:11,12:24:39.13:854,39,0	1/1:14,10:24:24.08:609,24,0	1/1:10,6:16:9.03:228,9,0
chr10	57686130	.	TG	T	8189.56	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=6.339;DP=519;FS=4.991;HRun=8;HaplotypeScore=54.9191;InbreedingCoeff=0.9677;MQ=80.57;MQ0=0;MQRankSum=-3.533;QD=24.37;ReadPosRankSum=2.227;VQSLOD=5.7489;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,39:40:99:985,102,0	1/1:1,11:12:30.05:290,30,0	0/0:12,0:12:30.07:0,30,336	0/0:19,0:19:33.27:0,33,323	1/1:1,9:10:30.05:289,30,0	0/0:14,0:14:39.12:0,39,469	0/0:23,0:23:63.19:0,63,761	1/1:1,20:21:57.07:545,57,0	1/1:1,20:21:48.08:463,48,0	1/1:3,15:18:42.06:406,42,0	1/1:1,9:10:24.03:231,24,0	0/0:28,0:28:78.24:0,78,936	0/0:10,0:10:1.98:0,2,298	0/0:18,0:18:51.09:0,51,568	1/1:0,25:25:69.06:657,69,0	1/1:1,18:19:48.08:464,48,0	1/1:3,22:25:54.08:521,54,0	1/1:0,7:7:21.03:203,21,0	1/1:5,18:23:51.04:480,51,0	1/1:1,16:17:48.04:454,48,0	1/1:2,16:18:48.08:463,48,0	0/0:10,0:10:24.06:0,24,280	0/0:22,0:22:45.14:0,45,542	0/0:27,0:27:72.22:0,72,869	1/1:1,14:15:42.07:406,42,0	1/1:2,21:23:63.10:608,63,0	1/1:1,22:23:51.08:492,51,0	1/1:1,8:9:24.04:232,24,0
chr10	57689557	.	C	CCTAT	10674.10	PASS	AB=0.711;AC=26;AF=0.500;AN=52;BaseQRankSum=-7.312;DP=694;FS=5.809;HRun=0;HaplotypeScore=122.6499;InbreedingCoeff=0.3275;MQ=63.36;MQ0=9;MQRankSum=-2.390;QD=23.77;ReadPosRankSum=-1.540;VQSLOD=4.2411;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:19,10:29:2.78:780,0,3	1/1:2,0:3:5.99:74,6,0	./.	./.	1/1:17,17:33:39.13:919,39,0	0/0:16,0:16:39.13:0,39,607	0/0:21,0:21:33.08:0,33,452	1/1:47,0:46:20.99:209,21,0	1/1:17,0:20:21.03:321,21,0	1/1:19,15:34:1.45:977,1,0	0/1:13,16:29:7.58:809,0,8	0/0:22,0:22:36.12:0,36,561	0/0:25,0:25:48.16:0,48,738	0/0:14,0:14:30.10:0,30,462	1/1:15,1:35:21.07:365,21,0	0/0:15,0:24:33.91:0,34,305	1/1:15,0:15:6:70,6,0	0/1:15,4:18:63.82:432,0,64	0/1:12,5:15:28.63:336,0,29	0/1:18,17:35:39.22:1073,0,39	0/1:12,10:22:19.62:539,0,20	0/0:14,0:25:33.44:0,33,290	0/0:22,0:22:30.07:0,30,439	0/0:12,0:13:9:0,9,121	0/1:9,13:22:12.82:672,0,13	1/1:11,14:27:1.44:956,1,0	1/1:19,15:33:60.21:1401,60,0	0/1:16,10:26:10.59:741,0,11
chr10	57689597	.	TCGC	T	445.60	PASS	AB=0.921;AC=8;AF=0.143;AN=56;BaseQRankSum=4.083;DP=820;FS=9.210;HRun=0;HaplotypeScore=158.7149;InbreedingCoeff=-0.1705;MQ=52.14;MQ0=45;MQRankSum=-3.761;QD=2.16;ReadPosRankSum=-5.406;VQSLOD=-0.2878;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:31,0:31:65.81:66,0,862	0/1:4,0:4:23.10:23,0,140	0/0:83,0:14:42.06:0,42,691	0/0:71,0:13:25.76:0,26,555	0/0:34,0:32:14.80:0,15,826	0/0:20,0:20:60.21:0,60,1415	0/0:17,0:16:45.14:0,45,987	0/1:45,8:45:99:269,0,2275	0/1:23,3:26:99:102,0,1064	0/1:42,0:42:60.80:61,0,2012	0/0:30,0:29:8.08:0,8,1012	0/0:25,0:25:72.25:0,72,1697	0/0:29,0:29:84.29:0,84,1939	0/0:15,0:15:45.15:0,45,1033	0/0:29,0:29:10.11:0,10,702	0/0:23,0:23:63.19:0,63,1107	0/1:9,4:13:33.73:34,0,348	0/1:13,2:15:11.45:11,0,695	0/0:23,0:17:48.16:0,48,988	0/0:35,0:34:72.07:0,72,1623	0/0:18,0:18:34.48:0,34,787	0/0:29,0:29:69.55:0,70,1183	0/0:28,0:27:74.93:0,75,1719	0/0:17,0:17:27.52:0,28,556	0/0:22,0:22:58.72:0,59,1094	0/0:31,0:31:29.32:0,29,1716	0/0:34,0:34:98.66:0,99,1777	0/1:21,1:21:14.75:15,0,733
chr10	57689656	.	CATCT	C	4697.41	PASS	AB=0.798;AC=23;AF=0.426;AN=54;BaseQRankSum=2.552;DP=633;FS=1.648;HRun=0;HaplotypeScore=139.0174;InbreedingCoeff=0.6641;MQ=54.44;MQ0=3;MQRankSum=1.552;QD=16.31;ReadPosRankSum=-0.365;VQSLOD=4.5096;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,1:31:36.12:0,36,842	1/1:2,0:11:12.01:112,12,0	./.	0/0:14,0:12:0.47:0,0,1	0/1:23,1:24:13.38:13,0,654	0/0:15,0:24:30.10:0,30,606	0/0:11,0:10:9.03:0,9,212	0/0:40,0:43:5.68:0,6,91	0/0:22,0:34:44.48:0,44,678	1/1:29,16:45:54.18:837,54,0	1/1:11,6:17:18.06:279,18,0	0/0:14,0:25:21.05:0,21,334	0/0:24,0:24:30.09:0,30,659	0/0:15,0:15:27.07:0,27,541	0/0:25,0:25:42.13:0,42,939	1/1:12,0:21:15.45:122,15,0	1/1:6,0:6:2.48:12,2,0	0/0:9,0:13:20.73:0,21,297	1/1:9,9:17:27.07:396,27,0	0/1:18,11:28:31.38:519,0,31	1/1:12,8:19:30.10:457,30,0	0/0:19,0:23:9.03:0,9,133	0/0:15,0:22:9.03:0,9,158	0/0:13,0:17:6.49:0,6,89	1/1:11,9:20:33.11:508,33,0	1/1:17,8:24:27.09:418,27,0	1/1:20,14:34:51.09:727,51,0	0/1:10,7:17:28:298,0,28
chr10	57689772	.	C	CATCT	4250.25	PASS	AB=0.901;AC=31;AF=0.646;AN=48;BaseQRankSum=-3.005;DP=694;FS=5.620;HRun=0;HaplotypeScore=170.5862;InbreedingCoeff=0.4820;MQ=52.35;MQ0=14;MQRankSum=-1.387;QD=9.36;ReadPosRankSum=-0.767;VQSLOD=3.9679;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:33:0.18:36,0,0	0/0:7,0:8:0.25:0,0,23	./.	./.	0/1:30,0:29:3.79:4,0,23	0/0:20,0:20:33.11:0,33,505	./.	./.	1/1:15,9:23:3.01:70,3,0	0/1:19,14:32:4.04:728,0,4	1/1:12,13:24:17.86:421,18,0	0/0:23,0:38:12.22:0,12,135	1/1:12,6:18:2.95:70,3,0	1/1:9,13:22:21.07:491,21,0	1/1:17,16:33:27.09:632,27,0	0/1:29,0:29:61.54:62,0,159	0/0:5,0:10:2.17:0,2,51	1/1:19,0:22:17.53:219,18,0	1/1:6,4:11:15.01:258,15,0	0/0:17,2:29:0.09:0,0,1	1/1:25,0:26:15.12:180,15,0	1/1:12,12:23:12:268,12,0	0/0:28,0:28:36.09:0,36,503	0/0:18,0:23:8.86:0,9,136	1/1:8,6:15:6.02:140,6,0	1/1:19,0:30:19.92:310,20,0	1/1:16,1:36:3.01:52,3,0	1/1:26,0:37:32.33:309,32,0
chr10	57689809	.	ATC	A	38.98	PASS	AB=0.970;AC=5;AF=0.096;AN=52;BaseQRankSum=4.455;DP=576;FS=9.103;HRun=0;HaplotypeScore=138.5280;InbreedingCoeff=0.3672;MQ=48.69;MQ0=39;MQRankSum=1.286;QD=0.70;ReadPosRankSum=1.284;VQSLOD=2.0561;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:18,2:15:54.42:54,0,95	0/1:3,0:3:1.05:1,0,37	./.	./.	1/1:9,13:22:17.51:86,18,0	0/0:24,0:24:48.16:0,48,852	0/0:14,0:8:6.02:0,6,85	0/0:37,0:17:51.09:0,51,721	0/0:23,0:21:30.10:0,30,480	0/0:32,0:30:90.25:0,90,1281	0/0:23,0:23:39.56:0,40,569	0/0:27,0:26:8.70:0,9,279	0/0:14,0:11:9.03:0,9,139	0/0:24,0:24:44.72:0,45,632	0/0:28,0:27:48.16:0,48,657	0/0:18,0:18:39.13:0,39,692	0/1:11,0:11:1.33:1,0,76	0/0:12,1:12:11.19:0,11,187	0/0:11,0:11:33.04:0,33,452	0/0:26,0:24:26.66:0,27,400	0/0:17,0:15:29.38:0,29,417	0/0:24,0:21:24.28:0,24,343	0/0:20,0:19:53.20:0,53,927	0/0:21,0:21:19.88:0,20,366	0/0:18,0:18:39.10:0,39,544	0/0:21,0:20:51.59:0,52,694	0/0:37,0:35:30.07:0,30,417	0/0:35,0:33:74.13:0,74,1221
chr10	57689815	.	CTA	C	342.02	PASS	AB=0.946;AC=8;AF=0.154;AN=52;BaseQRankSum=3.812;DP=553;FS=0.000;HRun=0;HaplotypeScore=128.8068;InbreedingCoeff=0.0951;MQ=47.12;MQ0=44;MQRankSum=-1.362;QD=2.25;ReadPosRankSum=-5.811;VQSLOD=-0.0113;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:17,2:15:7.38:88,0,7	0/0:3,0:3:2.68:0,3,44	./.	./.	1/1:9,11:20:10.15:28,10,0	0/0:23,0:23:48.16:0,48,823	0/0:10,1:5:3.01:0,3,46	0/0:32,1:19:48.15:0,48,699	0/0:22,0:20:21.07:0,21,317	0/1:29,0:26:1.25:1,0,812	0/0:22,0:22:33.52:0,34,430	0/0:29,0:28:19.89:0,20,315	0/0:14,0:10:9.03:0,9,124	0/0:24,0:23:38.69:0,39,517	0/0:24,0:23:48.15:0,48,622	0/0:18,0:18:33.10:0,33,476	0/0:11,0:11:8.30:0,8,97	0/1:13,1:12:24.01:24,0,33	0/0:11,0:11:11.97:0,12,378	0/0:26,0:24:23.65:0,24,364	0/1:14,2:14:99:139,0,221	0/0:24,0:20:24.28:0,24,325	0/0:20,0:19:47.16:0,47,740	0/0:21,0:21:17.03:0,17,308	0/0:14,0:14:30.10:0,30,451	0/1:18,0:16:51.59:52,0,373	0/0:31,1:31:24.08:0,24,369	0/1:31,2:33:99:138,0,974
chr10	57689817	.	A	ATC	851.78	PASS	AB=0.991;AC=16;AF=0.308;AN=52;BaseQRankSum=8.542;DP=539;FS=8.517;HRun=0;HaplotypeScore=121.7794;InbreedingCoeff=-0.2566;MQ=46.67;MQ0=46;MQRankSum=1.572;QD=2.89;ReadPosRankSum=-2.180;VQSLOD=1.5154;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:18,0:14:9.99:58,0,10	0/0:3,0:3:9.01:0,9,100	./.	./.	0/1:20,0:20:9.02:9,0,17	0/0:23,0:23:48.15:0,48,732	0/0:11,1:5:2.99:0,3,46	0/0:33,0:17:51.14:0,51,723	0/0:19,0:17:5.69:0,6,258	0/1:28,0:25:99:124,0,458	0/1:19,0:19:59.22:59,0,196	0/0:29,0:28:39.06:0,39,477	0/1:14,0:10:6.52:7,0,82	0/1:22,0:21:68.80:69,0,235	0/1:24,0:23:90.36:90,0,272	0/1:18,0:18:22.66:23,0,186	0/0:12,0:11:22.59:0,23,236	1/1:15,0:13:18.08:104,18,0	0/1:10,0:10:16.22:16,0,243	0/0:25,0:23:23.64:0,24,364	0/1:16,0:14:99:155,0,131	0/1:23,0:19:26.73:27,0,161	0/0:20,0:19:46.37:0,46,647	0/0:19,0:20:18.06:0,18,274	0/1:14,0:14:0.66:1,0,335	0/1:17,0:15:92.70:93,0,233	0/0:30,0:29:5.71:0,6,301	0/1:33,3:34:99:169,0,765
chr10	57689832	.	CT	C	87.37	PASS	AC=2;AF=0.038;AN=52;BaseQRankSum=4.119;DP=519;FS=8.608;HRun=1;HaplotypeScore=107.2748;InbreedingCoeff=0.6893;MQ=42.77;MQ0=63;MQRankSum=-0.913;QD=5.46;ReadPosRankSum=-1.972;VQSLOD=-0.6256;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:16:17.92:0,18,255	0/0:3,0:3:9.03:0,9,144	./.	./.	0/0:20,0:20:10.67:0,11,188	0/0:22,0:21:39.12:0,39,601	0/0:11,0:5:2.07:0,2,47	0/0:32,0:21:63.21:0,63,1006	0/0:17,0:16:21.07:0,21,336	0/0:27,0:24:72.23:0,72,1122	0/0:16,0:16:31.65:0,32,456	0/0:25,0:21:36.12:0,36,572	0/0:15,0:9:9.03:0,9,144	0/0:24,0:20:38.90:0,39,620	0/0:25,0:25:48.16:0,48,745	1/1:11,5:16:17.44:177,17,0	0/0:11,0:10:24.08:0,24,382	0/0:12,0:10:19.31:0,19,284	0/0:10,0:10:30.10:0,30,480	0/0:22,0:19:23.84:0,24,383	0/0:11,0:9:14.89:0,15,240	0/0:24,0:21:25.62:0,26,347	0/0:24,0:20:36.59:0,37,573	0/0:16,0:14:14.88:0,15,236	0/0:16,0:13:30.10:0,30,480	0/0:14,0:12:33.11:0,33,509	0/0:23,0:21:24.08:0,24,382	0/0:33,0:31:61.72:0,62,1005
chr10	57689867	.	C	CATCT	474.27	PASS	AC=6;AF=0.188;AN=32;BaseQRankSum=-0.121;DP=519;FS=2.741;HRun=0;HaplotypeScore=76.8575;InbreedingCoeff=0.5148;MQ=33.86;MQ0=110;MQRankSum=-2.514;QD=8.18;ReadPosRankSum=-0.515;VQSLOD=1.5625;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:15:3.90:0,4,51	./.	./.	./.	0/0:16,0:12:0.47:0,0,1	0/0:19,0:16:4.98:0,5,12	./.	1/1:17,0:14:12.04:236,12,0	./.	0/0:13,0:12:14.98:0,15,187	./.	0/0:27,0:22:1.25:0,1,3	0/0:21,0:8:1.25:0,1,3	./.	0/0:20,0:19:6.02:0,6,85	1/1:7,12:20:7.26:213,7,0	./.	1/1:5,0:13:11.11:134,11,0	0/0:11,0:9:9.02:0,9,122	0/0:21,0:18:4.24:0,4,28	./.	./.	0/0:26,0:20:3.01:0,3,48	./.	0/0:13,0:8:3:0,3,26	0/0:15,0:8:9.03:0,9,145	./.	0/0:28,0:23:6.02:0,6,96
chr10	57689893	.	TCGC	T	178.16	PASS	AB=0.909;AC=8;AF=0.182;AN=44;BaseQRankSum=4.010;DP=488;FS=9.958;HRun=0;HaplotypeScore=47.8855;InbreedingCoeff=0.2057;MQ=25.62;MQ0=150;MQRankSum=-2.249;QD=1.62;ReadPosRankSum=-0.545;VQSLOD=-0.0787;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:16,5:12:5.39:5,0,71	./.	./.	./.	0/1:13,1:8:0:0,0,0	0/0:18,0:14:15.05:0,15,354	0/0:16,0:5:3.01:0,3,46	0/1:22,0:11:24.41:24,0,376	./.	0/0:15,1:11:29.71:0,30,609	./.	0/0:30,0:25:24.08:0,24,545	0/0:20,0:7:3.01:0,3,71	0/0:22,0:16:6.02:0,6,123	0/0:15,0:14:6.02:0,6,107	0/1:13,0:13:15.31:61,0,15	./.	1/1:12,2:10:13.46:192,13,0	0/0:8,0:7:18.06:0,18,423	0/0:19,0:14:3:0,3,25	0/1:7,3:8:0:1,0,0	0/0:26,0:19:3.01:0,3,69	0/0:35,0:26:27.09:0,27,634	0/0:13,1:12:8.96:0,9,207	0/0:7,0:2:3:0,3,26	0/0:19,0:7:18.06:0,18,403	0/1:15,1:13:0:0,0,0	0/0:8,1:4:6.02:0,6,124
chr10	57689968	.	CTA	C	141.33	PASS	AB=1.000;AC=7;AF=0.206;AN=34;BaseQRankSum=4.599;DP=268;FS=1.551;HRun=0;HaplotypeScore=44.3960;InbreedingCoeff=0.6110;MQ=41.30;MQ0=39;MQRankSum=-4.450;QD=6.14;ReadPosRankSum=-0.377;VQSLOD=2.6963;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,3:5:8.45:69,8,0	./.	0/0:15,0:2:3.01:0,3,55	./.	./.	0/0:26,0:23:60.21:0,60,1099	0/0:7,0:3:6.02:0,6,110	0/0:16,0:11:30.10:0,30,436	./.	0/0:4,0:1:3:0,3,26	./.	0/0:27,0:27:66.23:0,66,1189	0/0:19,0:17:36.12:0,36,653	0/0:30,1:26:48.16:0,48,849	./.	0/0:1,0:1:2.98:0,3,21	./.	1/1:1,4:5:12.04:171,12,0	./.	./.	0/1:4,0:3:0:0,0,0	0/0:18,0:17:32.68:0,33,604	0/0:31,0:30:69.24:0,69,1224	0/0:12,0:11:18.04:0,18,280	./.	0/0:4,1:2:6.02:0,6,91	1/1:3,0:3:1.25:3,1,0	./.
chr10	57689982	.	C	CT	93.42	PASS	AB=0.822;AC=4;AF=0.111;AN=36;BaseQRankSum=3.276;DP=322;FS=0.000;HRun=1;HaplotypeScore=37.7338;InbreedingCoeff=0.1751;MQ=36.26;MQ0=63;MQRankSum=-2.959;QD=4.25;ReadPosRankSum=0.726;VQSLOD=0.2084;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:5:8.70:0,9,92	./.	0/0:17,0:1:2.98:0,3,22	./.	./.	0/0:29,0:24:54.18:0,54,753	0/0:10,0:6:6.02:0,6,84	0/0:24,0:15:42.08:0,42,546	./.	0/0:9,0:2:6.02:0,6,84	./.	0/0:25,0:22:54.18:0,54,755	0/0:21,1:17:36.12:0,36,503	0/0:29,0:23:45.15:0,45,629	./.	1/1:1,2:3:3:25,3,0	./.	0/1:5,3:7:61.89:128,0,62	0/0:1,0:1:3.01:0,3,42	./.	0/0:6,0:4:0:0,0,0	0/0:22,0:20:30.10:0,30,419	0/0:27,0:25:57.16:0,57,762	0/1:10,1:8:33.68:34,0,114	./.	0/0:5,0:3:8.99:0,9,104	0/0:6,0:6:2.88:0,3,15	./.
chr10	57690020	.	C	CATCT	364.46	PASS	AB=1.000;AC=8;AF=0.333;AN=24;BaseQRankSum=0.678;DP=402;FS=0.000;HRun=0;HaplotypeScore=39.6294;InbreedingCoeff=0.4661;MQ=25.97;MQ0=120;MQRankSum=-1.546;QD=5.61;ReadPosRankSum=-3.110;VQSLOD=0.5802;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	./.	./.	./.	1/1:20,3:18:20.02:283,20,0	0/1:9,0:9:0:0,0,0	0/0:21,0:8:24.08:0,24,388	./.	./.	0/0:28,0:14:1.25:0,1,3	0/0:26,0:17:4.26:0,4,51	./.	1/1:2,6:7:6.02:145,6,0	1/1:4,7:5:4.19:21,4,0	0/1:6,0:9:14.59:15,0,78	0/0:4,0:4:12.04:0,12,194	./.	0/0:10,0:5:0:0,0,0	./.	./.	0/0:11,0:6:0:0,0,0	./.	0/0:7,0:5:15.05:0,15,242	./.	./.
chr10	57690122	.	GTCTA	G	2280.38	PASS	AB=0.704;AC=7;AF=0.125;AN=56;BaseQRankSum=8.875;DP=666;FS=1.122;HRun=0;HaplotypeScore=130.3006;InbreedingCoeff=0.7707;MQ=53.76;MQ0=0;MQRankSum=-0.963;QD=26.83;ReadPosRankSum=1.114;VQSLOD=3.6574;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:12,10:19:12.72:481,13,0	0/0:14,0:14:33.11:0,33,808	0/0:14,0:9:9.43:0,9,146	0/0:9,0:3:6.02:0,6,111	1/1:8,13:21:36.92:523,37,0	0/0:29,0:29:75.26:0,75,1750	0/0:14,0:14:30.10:0,30,686	0/0:45,0:43:84.26:0,84,1796	0/0:26,0:26:63.22:0,63,1380	0/0:36,0:36:90.31:0,90,2195	0/0:34,0:34:63.20:0,63,1499	0/0:33,0:33:75.26:0,75,1752	0/0:19,0:19:39.13:0,39,907	0/0:15,0:14:32.85:0,33,779	0/0:27,0:27:75.26:0,75,1824	1/1:6,17:23:66.15:1011,66,0	0/0:20,0:20:54.17:0,54,1280	0/1:11,8:19:62.54:411,0,63	0/0:14,0:14:36.12:0,36,890	0/0:31,0:31:66.23:0,66,1603	0/0:19,0:19:36.12:0,36,861	0/0:30,0:30:69.24:0,69,1696	0/0:36,0:36:69.21:0,69,1578	0/0:10,0:10:9.03:0,9,223	0/0:20,0:20:54.19:0,54,1335	0/0:25,0:25:60.21:0,60,1450	0/0:33,0:33:81.28:0,81,1963	0/0:28,0:28:78.27:0,78,1897
chr10	57690218	.	A	ATATC	532.71	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=-0.870;DP=732;FS=5.722;HRun=0;HaplotypeScore=142.6732;InbreedingCoeff=0.7297;MQ=61.34;MQ0=4;MQRankSum=0.250;QD=6.34;ReadPosRankSum=-2.980;VQSLOD=1.6452;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:16,5:17:17.76:340,18,0	0/0:7,0:7:15.02:0,15,197	0/0:32,0:20:18.06:0,18,248	0/1:30,0:17:22.45:22,0,30	1/1:10,21:30:11.96:294,12,0	0/0:26,0:26:60.17:0,60,940	0/0:8,0:7:9.03:0,9,144	0/0:58,0:58:99:0,105,1545	0/0:36,0:36:72.23:0,72,1113	0/0:45,0:44:99:0,102,1573	0/0:18,0:17:33.08:0,33,492	0/0:28,0:28:66.20:0,66,1012	0/0:26,0:26:60.12:0,60,863	0/0:15,0:15:36.12:0,36,570	0/0:30,0:30:57.19:0,57,920	0/0:18,0:18:39.13:0,39,644	0/0:19,0:18:26.68:0,27,524	0/0:12,0:12:18.02:0,18,267	0/0:18,0:18:39.12:0,39,593	0/0:31,0:31:69.19:0,69,1056	0/0:26,0:26:57.19:0,57,936	0/0:20,0:20:33.03:0,33,461	0/0:28,0:29:75.20:0,75,1120	0/0:14,0:14:24.08:0,24,393	0/0:12,0:12:24.08:0,24,396	0/0:47,0:47:99:0,102,1439	0/0:35,0:35:78.27:0,78,1278	0/0:38,0:38:87.30:0,87,1414
chr10	57690395	.	ATCTG	A	1783.06	PASS	AB=0.984;AC=19;AF=0.339;AN=56;BaseQRankSum=1.564;DP=703;FS=33.044;HRun=0;HaplotypeScore=191.6123;InbreedingCoeff=0.0840;MQ=51.02;MQ0=36;MQRankSum=-0.042;QD=4.31;ReadPosRankSum=-5.251;VQSLOD=-0.4536;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:21:5.26:5,0,112	0/1:16,1:17:16.47:16,0,41	0/0:24,0:12:36.06:0,36,821	0/0:7,0:1:3.01:0,3,64	0/1:28,0:25:36.26:36,0,38	0/0:23,0:20:60.15:0,60,1380	0/0:22,0:15:36.12:0,36,929	1/1:29,3:24:59.13:537,59,0	0/1:34,0:33:28.54:29,0,47	1/1:35,1:34:32.05:361,32,0	0/0:26,1:26:3.62:0,4,79	0/0:25,0:24:66.21:0,66,1716	0/0:29,0:28:78.19:0,78,1798	0/0:18,0:18:51.13:0,51,1158	0/1:25,1:26:13.03:13,0,55	0/0:27,0:21:7.62:0,8,124	0/1:20,0:19:32.68:33,0,78	0/1:24,0:22:80.40:80,0,204	1/1:18,1:16:8.55:173,9,0	0/1:31,0:30:72.66:102,0,73	0/1:35,0:32:24.19:24,0,96	0/0:30,0:30:87.27:0,87,2153	0/0:24,0:19:56.92:0,57,1397	0/0:13,0:13:26.99:0,27,658	0/1:18,0:14:27.36:42,0,27	1/1:38,0:32:48.10:283,48,0	0/1:29,3:30:44.04:226,0,44	0/0:20,0:20:36.86:0,37,112
chr10	57690486	.	CTATCTAT	C	556.83	PASS	AB=0.704;AC=3;AF=0.054;AN=56;BaseQRankSum=4.929;DP=666;FS=3.845;HRun=0;HaplotypeScore=149.8499;InbreedingCoeff=0.5896;MQ=48.86;MQ0=38;MQRankSum=-5.035;QD=15.47;ReadPosRankSum=0.083;VQSLOD=2.8041;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:11,8:16:7.48:416,0,7	0/0:10,0:8:24.07:0,24,884	0/0:18,0:3:9.03:0,9,278	0/0:12,0:2:6.02:0,6,154	1/1:2,15:14:8.52:238,9,0	0/0:30,0:26:72.23:0,72,2374	0/0:23,0:17:48.15:0,48,1650	0/0:30,0:20:60.19:0,60,1858	0/0:20,0:16:45.14:0,45,1653	0/0:34,0:26:75.26:0,75,2685	0/0:20,0:17:45.15:0,45,1711	0/0:28,0:28:75.18:0,75,2637	0/0:26,0:26:75.18:0,75,2726	0/0:33,0:32:90.22:0,90,2940	0/0:25,0:22:63.22:0,63,2197	0/0:26,0:22:48.02:0,48,1133	0/0:24,0:22:59.90:0,60,2148	0/0:25,0:21:23.29:0,23,841	0/0:16,0:12:33.09:0,33,1063	0/0:24,0:21:54.14:0,54,1811	0/0:30,0:27:61.99:0,62,2467	0/0:29,0:24:66.19:0,66,2248	0/0:27,0:23:63.22:0,63,2345	0/0:21,0:21:45.13:0,45,1472	0/0:20,0:17:51.17:0,51,1839	0/0:34,0:24:69.22:0,69,2548	0/0:20,0:19:57.20:0,57,2090	0/0:25,0:25:52.96:0,53,2145
chr10	57690503	.	G	GTCTA	1639.92	PASS	AB=0.883;AC=5;AF=0.089;AN=56;BaseQRankSum=-0.662;DP=680;FS=0.000;HRun=0;HaplotypeScore=117.0657;InbreedingCoeff=0.4764;MQ=52.17;MQ0=21;MQRankSum=-3.491;QD=18.02;ReadPosRankSum=0.502;VQSLOD=2.8996;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:23:0.36:83,0,0	0/0:11,0:9:27.09:0,27,436	0/0:15,0:4:2.51:0,3,95	0/0:14,0:3:6.02:0,6,99	0/1:20,0:19:7.62:42,0,8	0/0:25,0:22:57.17:0,57,898	0/0:20,0:17:45.12:0,45,692	0/0:32,0:27:60.13:0,60,953	0/0:22,0:18:51.16:0,51,822	0/0:39,0:33:81.27:0,81,1317	0/0:17,0:16:45.15:0,45,733	0/0:30,0:30:69.20:0,69,1095	0/0:30,0:30:72.23:0,72,1171	0/0:31,0:30:72.23:0,72,1174	0/0:25,0:22:54.18:0,54,902	0/1:12,14:22:14.01:780,0,14	0/0:27,0:26:51.89:0,52,1026	1/1:8,11:17:39.57:858,40,0	0/0:14,0:11:30.07:0,30,463	0/0:23,0:22:57.19:0,57,936	0/0:33,0:30:72.16:0,72,1040	0/0:31,0:28:75.24:0,75,1228	0/0:31,0:29:72.22:0,72,1164	0/0:21,0:21:36.12:0,36,594	0/0:22,0:21:63.20:0,63,1019	0/0:34,0:28:69.21:0,69,1103	0/0:20,0:19:57.17:0,57,920	0/0:22,0:22:40.53:0,41,857
chr10	57690816	.	G	GCACACA	4173.92	PASS	AB=1.000;AC=31;AF=0.596;AN=52;BaseQRankSum=-0.370;DP=641;FS=10.590;HRun=0;HaplotypeScore=143.9018;InbreedingCoeff=0.8027;MQ=53.00;MQ0=13;MQRankSum=-3.523;QD=11.59;ReadPosRankSum=-1.622;VQSLOD=1.7855;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:24,1:24:14.34:152,14,0	0/0:9,0:10:19.61:0,20,323	./.	./.	1/1:14,0:24:2.97:78,3,0	0/0:13,0:18:24.97:0,25,404	0/0:26,0:27:33.10:0,33,602	0/1:26,0:23:18.40:18,0,181	1/1:6,14:27:27.09:758,27,0	1/1:20,5:28:30.01:534,30,0	1/1:7,0:11:12.03:141,12,0	0/0:28,0:33:30.14:0,30,721	0/0:28,0:30:36.81:0,37,944	0/0:20,0:21:21.22:0,21,439	1/1:13,1:23:11.69:198,12,0	1/1:12,0:22:6.02:107,6,0	0/0:27,0:31:55:0,55,935	1/1:17,1:19:23.16:353,23,0	1/1:18,3:19:16.30:363,16,0	1/1:12,9:23:9.03:232,9,0	1/1:29,0:41:8.97:84,9,0	0/0:24,0:25:22.26:0,22,609	0/0:18,0:18:4.12:0,4,429	0/0:25,0:28:51.15:0,51,989	1/1:6,2:9:12.03:226,12,0	1/1:14,1:14:23.95:307,24,0	1/1:11,7:22:7.42:216,7,0	1/1:8,8:19:13.40:406,13,0
chr10	57691185	.	G	GAC	1713.18	PASS	AB=0.719;AC=5;AF=0.089;AN=56;BaseQRankSum=-3.380;DP=711;FS=0.560;HRun=0;HaplotypeScore=95.2128;InbreedingCoeff=0.3315;MQ=59.64;MQ0=12;MQRankSum=0.448;QD=12.60;ReadPosRankSum=1.453;VQSLOD=3.2515;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:13,39:54:26.71:1220,0,27	0/0:5,0:7:14.68:0,15,120	0/0:33,0:18:20.87:0,21,205	0/1:36,1:17:29.20:29,0,72	0/1:8,11:23:76.06:298,0,76	0/0:25,0:27:59.49:0,59,607	0/0:27,0:27:50.97:0,51,564	0/0:22,0:19:34.97:0,35,339	0/0:18,0:19:50.97:0,51,565	0/0:27,0:28:49.03:0,49,701	0/0:10,0:10:27.06:0,27,305	0/0:29,0:29:72.07:0,72,764	0/0:16,0:16:30.04:0,30,326	0/0:24,0:26:59.65:0,60,618	0/0:16,0:16:35.94:0,36,369	0/0:22,0:23:50.81:0,51,553	0/0:32,0:35:77.52:0,78,803	1/1:5,0:20:32.99:289,33,0	0/0:21,0:23:41.61:0,42,401	0/0:22,0:21:42.11:0,42,481	0/0:53,0:59:99:0,113,1173	0/0:18,0:18:39.07:0,39,433	0/0:18,0:19:38.95:0,39,435	0/0:42,0:41:90.24:0,90,1037	0/0:16,0:17:32.92:0,33,355	0/0:22,0:24:56.80:0,57,604	0/0:15,0:19:41.81:0,42,439	0/0:9,0:9:12.04:0,12,141
chr10	57691261	.	CAGAG	C	999	PASS	AB=0.877;AC=26;AF=0.481;AN=54;BaseQRankSum=0.011;DP=621;FS=1.716;HRun=0;HaplotypeScore=112.7167;InbreedingCoeff=0.4801;MQ=56.09;MQ0=11;MQRankSum=-1.038;QD=2.99;ReadPosRankSum=2.057;VQSLOD=2.1605;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:31,3:36:11.78:150,12,0	0/0:4,0:7:0:0,0,0	./.	0/1:37,0:19:0:0,0,0	1/1:18,0:18:5.25:33,5,0	0/0:17,0:18:5.99:0,6,51	0/0:27,0:30:17.44:0,17,330	0/0:23,0:21:0:0,0,0	1/1:13,3:17:3:46,3,0	0/1:15,0:18:16.34:16,0,51	1/1:15,1:17:6.02:91,6,0	0/0:20,0:26:15.05:0,15,295	0/0:11,0:15:14.45:0,14,183	0/0:22,0:23:14.76:0,15,246	1/1:11,2:13:3:28,3,0	0/0:12,0:22:18.06:0,18,324	1/1:19,1:22:14.99:151,15,0	0/1:16,1:20:23.83:24,0,85	1/1:17,1:18:3.01:46,3,0	1/1:18,0:18:5.46:77,5,0	1/1:33,8:42:14.85:183,15,0	0/0:18,0:18:9.02:0,9,114	0/0:11,0:11:6.02:0,6,122	0/0:31,0:41:44.49:0,44,723	0/0:10,0:10:3.01:0,3,34	1/1:18,5:23:12.02:158,12,0	0/1:16,3:19:7.68:147,0,8	1/1:10,0:10:2.28:19,2,0
chr10	57692272	.	GA	G	2420.90	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=10.590;DP=695;FS=1.795;HRun=9;HaplotypeScore=67.0172;InbreedingCoeff=0.9775;MQ=77.74;MQ0=0;MQRankSum=-1.369;QD=20.87;ReadPosRankSum=1.607;VQSLOD=4.5370;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,48:48:99:1181,129,0	0/0:13,0:13:33.10:0,33,381	0/0:18,1:20:18.90:0,19,440	0/0:18,1:17:8.63:0,9,347	1/1:4,21:25:57.01:522,57,0	0/0:10,0:10:30.09:0,30,346	0/0:20,0:20:51.15:0,51,588	0/0:34,1:35:65.79:0,66,995	0/0:22,0:22:54.15:0,54,613	0/0:32,0:32:84.24:0,84,962	0/0:20,0:20:57.17:0,57,658	0/0:29,0:29:81.21:0,81,912	0/0:16,0:16:39.12:0,39,450	0/0:21,1:22:35.72:0,36,665	0/0:25,0:25:60.17:0,60,685	1/1:5,19:24:57.03:522,57,0	0/0:34,0:34:93.28:0,93,1073	1/1:3,16:19:39.02:357,39,0	0/0:15,1:17:17.50:0,17,437	0/0:24,0:25:63.02:0,63,705	0/0:30,0:30:78.21:0,78,881	0/0:28,0:28:72.21:0,72,831	0/0:33,0:33:87.25:0,87,994	0/0:22,0:22:66.20:0,66,762	0/0:23,0:23:63.19:0,63,727	0/0:38,0:38:87.73:0,88,1005	0/0:37,0:37:99:0,99,1118	0/0:8,0:8:24.07:0,24,277
chr10	57696267	.	C	CA	589.67	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=0.007;DP=494;FS=0.785;HRun=0;HaplotypeScore=88.4840;InbreedingCoeff=0.6767;MQ=73.65;MQ0=5;MQRankSum=-0.122;QD=20.33;ReadPosRankSum=3.686;VQSLOD=5.4282;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:17.60:0,18,143	0/0:7,0:6:6.89:0,7,63	0/0:28,0:22:36.62:0,37,502	0/0:26,0:18:38.32:0,38,409	0/0:8,0:8:15.92:0,16,135	0/0:23,0:23:62.48:0,62,735	0/0:28,0:28:68.79:0,69,817	0/0:22,0:22:25.08:0,25,209	0/0:13,0:13:24.91:0,25,246	0/0:7,0:7:9.95:0,10,90	0/0:6,0:6:12:0,12,119	0/0:34,0:34:84.77:0,85,1075	0/0:18,0:18:41.14:0,41,372	0/0:7,0:7:14.56:0,15,134	0/0:28,0:28:78.51:0,79,748	1/1:2,27:27:55.73:684,56,0	0/0:33,0:33:75.64:0,76,435	0/0:11,0:11:15.03:0,15,118	0/0:11,0:11:8.55:0,9,127	0/0:6,0:6:6:0,6,58	0/0:36,0:35:67.99:0,68,607	0/0:19,0:19:45.28:0,45,489	0/0:17,0:17:44.72:0,45,574	0/0:25,0:25:72.13:0,72,909	0/0:14,0:14:23.90:0,24,199	0/0:12,0:12:21.46:0,21,199	0/0:11,0:11:23.94:0,24,214	0/0:6,0:6:9:0,9,85
chr10	57696269	.	CCA	C	1774.27	PASS	AB=1.000;AC=33;AF=0.589;AN=56;BaseQRankSum=-4.884;DP=488;FS=10.024;HRun=0;HaplotypeScore=83.0742;InbreedingCoeff=0.7661;MQ=72.14;MQ0=5;MQRankSum=2.087;QD=7.52;ReadPosRankSum=-3.452;VQSLOD=1.3026;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,0:10:11.95:93,12,0	1/1:6,0:5:3.01:37,3,0	0/0:26,0:20:25.27:0,25,334	0/0:26,0:18:11.35:0,11,161	1/1:9,0:9:11.95:95,12,0	0/0:22,0:22:50.65:0,51,718	0/0:28,0:28:72.53:0,73,943	1/1:23,0:23:35.84:282,36,0	1/1:13,0:13:2.98:21,3,0	1/1:7,0:7:11.14:116,11,0	1/1:5,0:5:3.01:37,3,0	0/0:34,0:34:92.75:0,93,1216	0/0:18,0:18:12.01:0,12,144	0/0:5,0:5:6.01:0,6,73	1/1:24,3:27:26.97:293,27,0	0/0:29,0:27:59.79:0,60,507	0/1:35,0:35:6.79:127,0,7	1/1:12,0:12:11.97:95,12,0	1/1:13,0:13:19.67:145,20,0	1/1:1,5:6:8.94:76,9,0	1/1:31,1:31:15.50:232,16,0	0/0:22,0:22:42.22:0,42,461	0/0:17,0:17:42.13:0,42,622	0/0:25,0:25:67.14:0,67,954	1/1:12,1:13:8.97:71,9,0	1/1:12,0:12:18.01:177,18,0	1/1:9,0:9:5.99:47,6,0	1/1:1,3:4:3.01:37,3,0
chr10	57696965	.	TAGCA	T	5359.76	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=10.690;DP=625;FS=8.735;HRun=0;HaplotypeScore=109.0178;InbreedingCoeff=0.9922;MQ=84.42;MQ0=0;MQRankSum=-3.890;QD=48.29;ReadPosRankSum=4.939;VQSLOD=5.2558;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,48:48:99:2136,102,0	0/0:7,0:7:21.07:0,21,557	0/0:20,0:20:51.15:0,51,1241	0/0:22,0:22:18.15:0,18,1287	1/1:0,19:19:35.77:753,36,0	0/0:18,0:18:54.19:0,54,1516	0/0:21,0:21:63.21:0,63,1688	0/0:27,0:27:81.28:0,81,2229	0/0:23,0:23:69.22:0,69,1923	0/0:18,0:18:54.18:0,54,1422	0/0:20,0:20:57.20:0,57,1541	0/0:26,0:26:78.27:0,78,2172	0/0:18,0:18:54.19:0,54,1524	0/0:32,0:32:96.32:0,96,2707	0/0:29,0:29:81.26:0,81,2247	1/1:0,23:23:66.18:1339,66,0	0/0:38,0:38:99:0,114,3223	1/1:0,21:21:54.19:1131,54,0	0/0:21,0:21:63.22:0,63,1765	0/0:11,0:11:33.10:0,33,856	0/0:32,0:32:96.33:0,96,2729	0/0:25,0:25:69.24:0,69,1996	0/0:14,0:14:42.14:0,42,1216	0/0:24,0:24:72.25:0,72,2083	0/0:21,0:21:63.20:0,63,1755	0/0:19,0:19:57.19:0,57,1548	0/0:23,0:23:69.24:0,69,1944	0/0:5,0:5:15.05:0,15,434
chr10	57698142	.	G	GGACACTCTTTGATTAAATCA	13522.89	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=3.101;DP=548;FS=3.034;HRun=0;HaplotypeScore=284.4948;InbreedingCoeff=0.9906;MQ=91.66;MQ0=0;MQRankSum=-12.030;QD=169.04;ReadPosRankSum=-2.172;VQSLOD=3.7523;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:23,4:27:60.19:4114,60,0	0/0:6,0:6:18.03:0,18,757	0/0:25,0:25:66.20:0,66,2860	0/0:25,0:25:64.73:0,65,2530	1/1:20,6:26:75.26:4241,75,0	0/0:14,0:14:36.12:0,36,1870	0/0:9,0:9:27.09:0,27,1530	0/0:31,0:31:81.27:0,81,3629	0/0:13,0:13:39.13:0,39,2128	0/0:33,0:33:99:0,99,4923	0/0:20,0:20:57.20:0,57,3050	0/0:12,0:12:36.12:0,36,1808	0/0:12,0:12:36.09:0,36,1481	0/0:20,0:20:60.21:0,60,3272	0/0:24,0:24:57.20:0,57,3087	1/1:18,2:20:54.19:4063,54,0	0/0:19,0:19:42.14:0,42,2136	1/1:7,0:7:18.04:1105,18,0	0/0:17,0:17:48.16:0,48,2243	0/0:24,0:24:72.23:0,72,3521	0/0:17,0:17:42.14:0,42,2044	0/0:25,0:25:72.24:0,72,3602	0/0:23,0:23:64.45:0,64,2929	0/0:23,0:23:69.22:0,69,3432	0/0:11,0:11:33.11:0,33,1763	0/0:29,0:29:87.30:0,87,4638	0/0:27,0:27:75.26:0,75,3750	0/0:9,0:9:15.05:0,15,850
chr10	57698171	.	AT	A	5522.99	PASS	AB=0.875;AC=37;AF=0.661;AN=56;BaseQRankSum=9.587;DP=502;FS=0.803;HRun=10;HaplotypeScore=78.6603;InbreedingCoeff=0.9037;MQ=68.58;MQ0=4;MQRankSum=-0.550;QD=15.78;ReadPosRankSum=0.104;VQSLOD=5.1219;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,0:22:40.08:117,40,0	1/1:0,8:8:20.99:181,21,0	0/1:12,2:10:19.17:19,0,115	0/0:15,0:13:15.26:0,15,188	1/1:3,0:25:43.01:124,43,0	0/0:10,0:10:27.07:0,27,299	0/0:11,0:11:24.06:0,24,266	1/1:4,18:22:50.97:440,51,0	1/1:6,6:12:23.98:208,24,0	1/1:9,22:30:65.94:567,66,0	1/1:2,24:26:68.93:590,69,0	0/0:13,0:13:30.08:0,30,332	0/0:14,0:14:39.10:0,39,428	0/0:17,0:16:45.12:0,45,497	1/1:1,18:19:38.99:339,39,0	1/1:0,0:11:22.19:66,22,0	1/1:4,20:24:42.46:366,42,0	1/1:0,1:10:17.26:68,17,0	1/1:1,13:14:8.24:284,8,0	1/1:4,23:27:56.81:514,57,0	1/1:2,8:10:17.99:156,18,0	0/0:20,0:20:54.02:0,54,553	0/0:24,0:24:60.16:0,60,659	0/0:28,0:28:78.15:0,78,840	1/1:1,16:16:44.99:391,45,0	1/1:10,12:22:53.97:468,54,0	1/1:3,22:25:50.40:442,50,0	1/1:0,10:10:21:182,21,0
chr10	57698255	.	A	ATT	1011.67	PASS	AB=0.684;AC=5;AF=0.089;AN=56;BaseQRankSum=6.051;DP=585;FS=3.349;HRun=3;HaplotypeScore=121.5377;InbreedingCoeff=0.5001;MQ=70.65;MQ0=2;MQRankSum=-2.985;QD=12.04;ReadPosRankSum=-0.520;VQSLOD=0.3763;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,12:20:48.90:547,49,0	0/0:16,0:16:41.38:0,41,507	0/0:22,0:12:11.59:0,12,167	0/0:19,0:13:30.89:0,31,354	0/1:16,8:27:0.19:356,0,0	0/0:8,0:8:24.08:0,24,388	0/0:15,0:15:42.14:0,42,680	0/0:26,0:26:73.91:0,74,846	0/0:26,0:26:75.02:0,75,979	0/0:21,0:21:60.06:0,60,831	0/0:24,0:24:68.99:0,69,806	0/0:13,0:13:39.13:0,39,615	0/0:26,0:26:75.25:0,75,1172	0/0:22,0:22:66.22:0,66,1060	0/0:19,0:19:54.16:0,54,694	0/1:10,1:17:33.44:103,0,33	0/0:22,0:21:57.16:0,57,708	0/1:8,1:19:12:130,0,12	0/0:13,0:13:26.43:0,26,467	0/0:31,0:31:89.39:0,89,1103	0/0:10,0:10:24.07:0,24,306	0/0:17,0:17:51.09:0,51,771	0/0:22,0:22:63.20:0,63,972	0/0:35,0:35:99:0,105,1633	0/0:29,0:28:76.26:0,76,988	0/0:25,0:25:74.23:0,74,933	0/0:32,0:31:85.96:0,86,1051	0/0:8,0:8:24.07:0,24,288
chr10	57698256	.	A	AT	6421.87	PASS	AB=0.863;AC=36;AF=0.643;AN=56;BaseQRankSum=-0.520;DP=591;FS=10.150;HRun=13;HaplotypeScore=93.8264;InbreedingCoeff=0.7508;MQ=70.72;MQ0=2;MQRankSum=-1.289;QD=15.55;ReadPosRankSum=-0.994;VQSLOD=4.4696;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:21:54.09:297,54,0	1/1:9,5:16:12.12:227,12,0	0/1:24,1:12:3.21:18,0,3	0/0:20,0:13:16.41:0,16,93	1/1:28,0:28:19.02:191,19,0	0/0:7,0:8:19.89:0,20,129	0/0:15,0:15:35.67:0,36,245	1/1:5,20:26:60.29:516,60,0	1/1:8,17:26:0.50:401,1,0	1/1:9,11:21:15.29:268,15,0	1/1:8,13:22:50.88:455,51,0	0/0:13,1:14:4.87:0,5,177	0/0:23,1:25:27.65:0,28,326	0/0:22,0:22:53.49:0,53,370	1/1:6,13:19:42.05:390,42,0	1/1:18,0:18:4.85:245,5,0	1/1:9,13:21:30.48:423,30,0	1/1:20,0:20:6.76:282,7,0	0/1:9,3:13:17.43:118,0,17	1/1:13,18:32:48.33:579,48,0	1/1:1,9:10:3.45:174,3,0	0/0:14,0:17:43.35:0,43,284	0/0:18,1:21:20.87:0,21,272	0/0:35,0:36:60.43:0,60,553	1/1:16,12:28:24.59:474,25,0	1/1:4,21:25:62.99:569,63,0	1/1:12,19:30:44.66:580,45,0	1/1:3,5:8:24:213,24,0
chr10	57699249	.	T	TCAAA	1549.90	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=6.992;DP=763;FS=0.000;HRun=0;HaplotypeScore=133.5942;InbreedingCoeff=0.7630;MQ=63.45;MQ0=0;MQRankSum=-2.180;QD=29.81;ReadPosRankSum=-1.001;VQSLOD=3.0892;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:35.71:0,36,1062	0/1:14,0:14:12.30:12,0,313	0/0:27,0:24:18.05:0,18,265	0/0:25,0:24:23.91:0,24,344	0/0:31,0:31:60.18:0,60,707	0/0:40,0:40:84.29:0,84,1353	0/0:31,0:31:8.76:0,9,596	0/0:31,0:31:42.14:0,42,675	0/0:25,0:25:54.09:0,54,769	0/0:35,0:35:75.26:0,75,1208	0/0:23,0:23:57.18:0,57,894	0/0:17,0:17:39.12:0,39,602	0/0:22,0:23:45.13:0,45,676	0/0:26,0:26:54.17:0,54,846	0/0:45,0:45:84.29:0,84,1353	1/1:11,15:26:51.16:1164,51,0	0/0:26,0:26:51.17:0,51,815	1/1:6,6:12:21.07:501,21,0	0/0:18,0:18:30.08:0,30,458	0/0:26,0:27:60.20:0,60,944	0/0:38,0:38:75.22:0,75,1159	0/0:19,0:19:45.15:0,45,725	0/0:20,0:20:48.16:0,48,768	0/0:31,0:32:81.23:0,81,1234	0/0:24,0:24:51.17:0,51,819	0/0:32,0:32:69.23:0,69,1090	0/0:34,0:34:81.28:0,81,1296	0/0:11,0:12:24.07:0,24,366
chr10	57699753	.	T	TGC	804.41	PASS	AB=1.000;AC=6;AF=0.107;AN=56;BaseQRankSum=8.282;DP=298;FS=1.878;HRun=0;HaplotypeScore=39.8363;InbreedingCoeff=0.4547;MQ=64.20;MQ0=1;MQRankSum=0.344;QD=13.87;ReadPosRankSum=3.352;VQSLOD=3.3664;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,17:24:36.74:644,37,0	0/0:7,0:7:21.06:0,21,311	0/0:6,0:4:1.55:0,2,4	0/0:16,0:6:1.79:0,2,9	1/1:3,6:9:15.05:256,15,0	0/0:23,0:23:69.21:0,69,1089	0/0:2,0:2:6.02:0,6,98	0/0:48,0:48:99:0,141,2190	0/0:2,0:2:6.02:0,6,98	0/0:8,0:8:24.08:0,24,388	0/0:7,0:7:21.07:0,21,337	0/0:5,0:5:12.04:0,12,187	0/0:4,0:4:9.02:0,9,120	0/0:3,0:3:6.01:0,6,74	0/0:4,0:4:9:0,9,118	0/1:6,0:6:1.02:1,0,42	0/0:24,0:24:66.22:0,66,1058	0/1:19,0:19:27.91:28,0,72	0/0:18,0:18:54.18:0,54,867	0/0:5,0:5:15.05:0,15,242	0/0:7,0:7:21.07:0,21,335	0/0:2,0:2:6.02:0,6,95	0/0:2,0:2:6.02:0,6,93	0/0:4,0:4:5.99:0,6,66	0/0:9,0:9:27.07:0,27,406	0/0:7,0:7:21.05:0,21,295	0/0:14,0:14:39.10:0,39,562	0/0:13,0:13:39.05:0,39,550
chr10	57699861	.	T	TTTTGTTTTG	1932.87	PASS	AB=1.000;AC=8;AF=0.143;AN=56;BaseQRankSum=5.880;DP=391;FS=1.627;HRun=0;HaplotypeScore=124.4483;InbreedingCoeff=0.6435;MQ=59.78;MQ0=12;MQRankSum=-7.956;QD=24.78;ReadPosRankSum=1.799;VQSLOD=3.2562;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:15:6.90:415,7,0	0/0:6,0:6:9.03:0,9,201	0/0:18,0:6:12.04:0,12,213	0/1:13,0:6:3.63:4,0,169	1/1:23,0:22:7.82:550,8,0	0/0:12,0:12:24.07:0,24,498	0/0:15,0:14:39.11:0,39,920	0/0:21,0:21:48.04:0,48,1020	0/0:11,0:11:27.08:0,27,689	0/0:18,0:17:45.15:0,45,1110	0/0:12,0:12:29.42:0,29,670	0/0:11,0:11:27.06:0,27,631	0/0:8,0:7:15.01:0,15,228	0/0:12,0:12:29.57:0,30,663	0/0:5,0:4:9.03:0,9,267	1/1:4,5:11:17.42:662,17,0	0/0:30,0:29:43.48:0,43,1365	0/1:15,0:15:99:438,0,104	0/0:11,0:10:25.52:0,26,618	0/0:13,0:13:33.07:0,33,792	0/0:14,0:14:42.10:0,42,1002	0/0:7,0:7:18.06:0,18,492	0/0:13,0:13:39.04:0,39,866	0/0:18,0:18:26.61:0,27,694	0/0:17,0:16:48.10:0,48,1192	0/0:17,0:17:45.04:0,45,1025	0/0:13,0:13:36.03:0,36,694	0/0:11,0:11:30.10:0,30,893
chr10	57699867	.	T	TTTTGTTTTG	2852.01	PASS	AB=0.806;AC=8;AF=0.143;AN=56;BaseQRankSum=1.979;DP=393;FS=0.000;HRun=0;HaplotypeScore=119.5741;InbreedingCoeff=0.5946;MQ=55.98;MQ0=13;MQRankSum=-7.965;QD=35.65;ReadPosRankSum=2.950;VQSLOD=3.3713;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:16:23.99:610,24,0	0/0:5,0:5:13.27:0,13,223	0/0:16,0:4:11.96:0,12,161	0/1:14,0:6:23.45:23,0,115	1/1:21,0:20:45.14:1161,45,0	0/0:11,0:11:24.05:0,24,397	0/0:15,0:14:35.92:0,36,764	0/0:25,0:25:42.72:0,43,1017	0/0:10,0:9:24.07:0,24,520	0/0:17,0:16:45.13:0,45,918	0/0:11,0:11:27.09:0,27,592	0/0:9,0:9:24.08:0,24,467	0/0:8,0:7:14.98:0,15,172	0/0:13,0:13:24.96:0,25,456	0/0:5,0:4:9.03:0,9,253	1/1:8,0:9:0.97:455,1,0	0/0:32,0:31:58.12:0,58,1183	0/1:7,9:19:41.76:745,0,42	0/0:11,0:10:22.56:0,23,452	0/0:12,0:12:33.09:0,33,598	0/0:15,0:15:42.13:0,42,1078	0/0:7,0:7:18.05:0,18,384	0/0:13,0:13:33.58:0,34,766	0/0:23,0:23:29.40:0,29,625	0/0:17,0:16:48.11:0,48,991	0/0:16,0:16:46.97:0,47,805	0/0:12,0:12:33.10:0,33,545	0/0:10,0:10:30.10:0,30,871
chr10	57699869	.	T	TTGTTTTG	2872.61	PASS	AB=0.983;AC=7;AF=0.125;AN=56;BaseQRankSum=0.585;DP=396;FS=0.741;HRun=0;HaplotypeScore=96.4436;InbreedingCoeff=0.5489;MQ=55.56;MQ0=13;MQRankSum=-7.358;QD=35.03;ReadPosRankSum=3.913;VQSLOD=2.9444;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,12:18:24.06:794,24,0	0/0:5,0:5:15:0,15,253	0/0:17,0:4:11.96:0,12,150	0/1:15,0:6:4.47:4,0,101	1/1:7,13:19:45.15:1441,45,0	0/0:11,0:11:27.04:0,27,402	0/0:14,0:13:39.06:0,39,803	0/0:27,0:27:63.08:0,63,1117	0/0:10,0:9:24.07:0,24,509	0/0:17,0:16:48.13:0,48,892	0/0:11,0:11:27.09:0,27,568	0/0:9,0:9:24.08:0,24,466	0/0:8,0:7:18.03:0,18,244	0/0:11,0:11:27.01:0,27,487	0/0:5,0:4:9.03:0,9,229	0/1:9,0:9:6.74:237,0,7	0/0:34,0:33:66.30:0,66,1234	0/1:18,0:18:69:534,0,69	0/0:11,0:10:26.98:0,27,451	0/0:12,0:12:33.09:0,33,582	0/0:15,0:15:42.14:0,42,1044	0/0:7,0:7:18.05:0,18,366	0/0:12,0:12:36.12:0,36,750	0/0:24,0:24:35.67:0,36,665	0/0:17,0:16:48.12:0,48,944	0/0:16,0:16:47.92:0,48,798	0/0:11,0:11:33.11:0,33,606	0/0:10,0:10:30.10:0,30,791
chr10	57701216	.	C	CTCTT	32842.05	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-7.437;DP=735;FS=4.278;HRun=0;HaplotypeScore=117.7809;InbreedingCoeff=0.9999;MQ=86.23;MQ0=0;MQRankSum=-12.144;QD=68.71;ReadPosRankSum=1.932;VQSLOD=6.7347;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,41:49:99:3239,126,0	1/1:3,8:12:30.03:699,30,0	0/0:21,0:21:60.21:0,60,1150	0/0:36,0:36:96.27:0,96,1769	1/1:6,24:31:81.24:1968,81,0	0/0:18,0:18:54.19:0,54,1043	0/0:23,0:23:69.24:0,69,1329	1/1:11,15:28:75.25:1903,75,0	1/1:9,21:31:72.25:1902,72,0	1/1:2,33:36:99:2858,105,0	1/1:4,13:17:51.09:1145,51,0	0/0:31,0:31:84.28:0,84,1580	0/0:28,0:28:78.27:0,78,1504	0/0:29,0:29:84.29:0,84,1620	1/1:1,26:27:75.26:2013,75,0	1/1:4,16:21:60.21:1555,60,0	1/1:3,29:33:90.31:2418,90,0	1/1:5,16:24:51.18:1392,51,0	1/1:10,14:24:69.24:1815,69,0	1/1:2,17:21:57.19:1361,57,0	1/1:4,28:33:75.22:1950,75,0	0/0:19,0:19:54.19:0,54,1042	0/0:21,0:21:60.21:0,60,1154	0/0:31,0:31:81.21:0,81,1448	1/1:3,31:35:90.27:2402,90,0	1/1:3,20:24:72.23:1852,72,0	1/1:1,14:16:42.14:1138,42,0	1/1:0,15:16:45.15:1232,45,0
chr10	57702675	.	AAG	A	55.64	PASS	AB=0.950;AC=8;AF=0.167;AN=48;BaseQRankSum=-1.539;DP=548;FS=6.811;HRun=0;HaplotypeScore=103.2970;InbreedingCoeff=0.0769;MQ=68.34;MQ0=13;MQRankSum=1.654;QD=0.31;ReadPosRankSum=0.990;VQSLOD=1.5571;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:3.47:0,3,26	./.	./.	0/1:45,0:21:0:0,0,0	./.	0/1:12,2:13:20.33:55,0,20	0/1:24,0:24:8.33:8,0,141	0/0:23,0:22:17.28:0,17,92	0/0:16,0:15:2.71:0,3,24	0/0:12,0:11:9.90:0,10,49	0/0:7,0:5:3.01:0,3,40	0/1:21,2:23:14.86:15,0,326	0/0:22,0:21:7.72:0,8,72	0/0:14,0:14:18.03:0,18,231	0/0:17,0:16:0:0,0,0	0/0:19,0:19:5.68:0,6,48	0/0:24,0:22:6.45:0,6,61	0/1:21,0:21:2.03:2,0,103	0/0:19,0:18:14.69:0,15,100	0/0:12,0:12:0:0,0,0	0/0:18,0:18:2.99:0,3,24	0/0:13,0:13:0.89:0,1,2	1/1:16,0:16:6.22:42,6,0	0/1:33,4:37:42.01:42,0,545	0/0:21,0:20:2.99:0,3,23	0/0:18,0:17:9.75:0,10,76	0/0:18,0:18:5.93:0,6,41	./.
chr10	57702724	.	A	AGC	3502.92	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-0.700;DP=644;FS=13.022;HRun=0;HaplotypeScore=105.5465;InbreedingCoeff=0.9746;MQ=69.08;MQ0=12;MQRankSum=-0.594;QD=13.79;ReadPosRankSum=-0.488;VQSLOD=2.1878;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:44.14:0,44,444	0/0:7,0:7:11.05:0,11,83	0/0:35,0:23:38.44:0,38,440	0/0:50,0:23:32.92:0,33,393	0/0:28,0:28:56.88:0,57,462	0/0:11,0:11:26.95:0,27,233	0/0:27,0:27:62.93:0,63,571	0/0:29,0:28:53.98:0,54,485	1/1:15,0:15:23.76:166,24,0	1/1:26,0:26:56.52:458,57,0	1/1:22,0:19:28.87:208,29,0	0/0:21,0:21:54:0,54,563	0/0:20,0:20:49.08:0,49,381	0/0:19,0:19:44.69:0,45,451	1/1:19,0:19:12.49:228,12,0	0/0:23,0:23:35.90:0,36,297	0/0:18,0:17:32.87:0,33,260	1/1:24,0:24:54.80:380,55,0	1/1:4,18:22:56.18:408,56,0	1/1:15,0:15:29.68:214,30,0	1/1:29,0:28:49.76:387,50,0	0/0:19,0:19:31.66:0,32,249	0/0:17,0:17:27.27:0,27,220	0/0:33,0:33:87.09:0,87,921	1/1:29,0:28:56.45:400,56,0	1/1:31,0:30:60.40:451,60,0	1/1:15,0:15:23.61:166,24,0	1/1:6,0:5:5.91:38,6,0
chr10	57704955	.	CTATATATA	C	1046.99	PASS	AC=8;AF=0.182;AN=44;BaseQRankSum=2.412;DP=204;FS=1.051;HRun=0;HaplotypeScore=53.5213;InbreedingCoeff=0.5207;MQ=68.31;MQ0=2;MQRankSum=-4.645;QD=20.94;ReadPosRankSum=0.721;VQSLOD=2.4749;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,7:12:9.03:235,9,0	./.	0/0:5,0:4:3.01:0,3,62	0/0:16,0:6:7.27:0,7,132	1/1:6,9:17:21.03:447,21,0	0/0:9,0:11:24.08:0,24,938	0/0:2,0:3:3.01:0,3,105	0/0:13,0:11:12.04:0,12,420	./.	./.	0/0:5,0:5:3.01:0,3,118	0/0:5,0:6:9.03:0,9,318	0/0:4,0:4:3.01:0,3,100	0/0:10,0:10:15.05:0,15,631	0/0:9,0:10:12.03:0,12,252	1/1:7,0:9:5.81:31,6,0	0/0:7,0:9:3.01:0,3,36	1/1:4,8:12:18.06:465,18,0	0/0:10,0:9:9.03:0,9,294	0/0:5,0:5:3.48:0,3,45	./.	0/0:4,0:4:3.01:0,3,126	./.	./.	0/0:9,0:8:6:0,6,97	0/0:3,0:3:1.55:0,2,4	0/0:5,0:5:3.01:0,3,48	0/0:7,0:7:9.03:0,9,316
chr10	57705046	.	CTAGAGA	C	628.97	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=5.679;DP=323;FS=32.864;HRun=0;HaplotypeScore=67.7668;InbreedingCoeff=0.1976;MQ=76.09;MQ0=12;MQRankSum=-4.419;QD=6.69;ReadPosRankSum=0.455;VQSLOD=-0.3769;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:11:14.60:105,15,0	0/1:3,0:3:15.04:15,0,43	0/0:25,0:19:47.25:0,47,452	0/0:26,0:12:27.81:0,28,255	0/1:13,0:11:76.88:77,0,184	0/0:11,0:11:32.98:0,33,310	0/0:4,0:4:11.99:0,12,103	0/0:14,0:14:42.06:0,42,426	0/1:5,0:5:9.07:9,0,85	0/0:13,0:12:2.36:0,2,304	0/0:12,0:12:7.91:0,8,227	0/0:11,0:11:32.82:0,33,337	0/0:15,0:15:32.92:0,33,312	0/0:7,0:7:17.82:0,18,163	0/1:13,0:13:98.08:98,0,151	1/1:0,12:12:12.04:292,12,0	0/1:12,0:12:7.19:7,0,181	1/1:8,0:10:0.13:136,0,0	0/0:9,0:9:27.04:0,27,258	0/0:10,0:10:26.81:0,27,228	0/0:11,0:10:20.98:0,21,178	0/0:11,0:11:29.97:0,30,274	0/0:19,0:19:50.96:0,51,448	0/0:9,0:6:17.44:0,17,159	0/0:11,0:10:26.99:0,27,234	0/0:11,0:11:33.05:0,33,317	0/1:8,0:8:18.72:19,0,150	0/1:7,0:7:27.91:28,0,116
chr10	57705047	.	TAGAGAG	T	680.55	PASS	AB=0.928;AC=19;AF=0.432;AN=44;BaseQRankSum=3.462;DP=333;FS=0.000;HRun=0;HaplotypeScore=69.6848;InbreedingCoeff=0.2296;MQ=75.04;MQ0=12;MQRankSum=-2.515;QD=5.08;ReadPosRankSum=-0.158;VQSLOD=1.2085;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:13:0:0,0,0	1/1:2,0:3:3.01:42,3,0	./.	0/1:26,0:12:0:0,0,0	0/0:18,0:16:9.03:0,9,244	0/0:11,0:11:3.01:0,3,43	./.	0/0:14,0:14:6.01:0,6,69	1/1:4,0:5:3.01:42,3,0	1/1:12,1:12:3.01:61,3,0	1/1:11,0:12:3.01:42,3,0	0/0:10,0:11:7.98:0,8,79	0/0:12,0:15:2.37:0,2,41	0/0:5,0:7:2.06:0,2,19	1/1:7,6:13:9.03:182,9,0	1/1:12,0:12:12.51:231,13,0	0/1:11,0:12:36.53:54,0,37	0/1:11,0:12:39.87:40,0,105	./.	./.	0/1:10,1:10:0:0,0,0	0/0:10,0:10:3:0,3,25	0/0:19,0:19:2.99:0,3,24	0/0:8,0:7:1.32:0,1,39	./.	./.	1/1:7,1:8:3.01:61,3,0	0/1:6,1:7:17.95:55,0,18
chr10	57706083	.	G	GGAA	2395.87	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-1.805;DP=685;FS=1.691;HRun=0;HaplotypeScore=105.8583;InbreedingCoeff=0.9996;MQ=77.04;MQ0=0;MQRankSum=-0.008;QD=31.12;ReadPosRankSum=-2.107;VQSLOD=3.6679;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,36:47:85.59:1497,86,0	0/0:11,0:12:35.47:0,35,467	0/0:36,0:31:56.24:0,56,521	0/0:25,0:21:30.90:0,31,311	1/1:1,23:30:68.68:1021,69,0	0/0:19,0:20:60.11:0,60,849	0/0:21,0:23:63.10:0,63,903	0/0:29,0:30:79.87:0,80,1081	0/0:26,0:27:74.95:0,75,1022	0/0:28,0:30:84.67:0,85,1172	0/0:16,0:17:44.53:0,45,671	0/0:33,0:34:98.81:0,99,1418	0/0:16,0:16:48.08:0,48,708	0/0:21,0:21:60.10:0,60,874	0/0:23,0:23:68.73:0,69,962	0/0:19,0:21:62.98:0,63,962	0/0:28,0:30:87.17:0,87,1269	0/0:18,0:19:53.53:0,54,697	0/0:18,0:20:60.13:0,60,802	0/0:21,0:24:64.05:0,64,867	0/0:19,0:20:56.95:0,57,796	0/0:16,0:19:47.31:0,47,717	0/0:23,0:24:69.88:0,70,997	0/0:28,0:29:84.18:0,84,1219	0/0:29,0:29:83.86:0,84,1191	0/0:21,0:21:54.09:0,54,840	0/0:22,0:23:69.02:0,69,1025	0/0:13,0:13:39.03:0,39,539
chr10	57709782	.	C	CCTTATTACTTATTACTTATTA	4954.75	PASS	AB=0.846;AC=6;AF=0.107;AN=56;BaseQRankSum=2.978;DP=654;FS=9.565;HRun=0;HaplotypeScore=343.4023;InbreedingCoeff=0.6409;MQ=72.45;MQ0=0;MQRankSum=-5.477;QD=47.64;ReadPosRankSum=-5.222;VQSLOD=1.6983;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,10:26:21.07:1510,21,0	0/0:21,0:21:42.07:0,42,1765	0/0:19,0:19:11.22:0,11,306	0/0:14,0:14:12.03:0,12,177	1/1:17,19:38:12.37:2302,12,0	0/0:21,0:21:36.12:0,36,1883	0/0:22,0:22:54.15:0,54,2333	0/0:29,0:29:42.12:0,42,1336	0/0:24,0:24:24.08:0,24,1141	0/0:32,0:32:63.19:0,63,2507	0/0:28,0:28:72.22:0,72,3249	0/0:20,0:20:57.15:0,57,2191	0/0:19,0:19:45.14:0,45,1856	0/0:21,0:21:42.10:0,42,1726	0/0:24,0:24:44.18:0,44,1742	0/1:10,0:18:5.18:324,0,5	0/0:27,0:27:51.15:0,51,2551	0/1:22,0:22:99:819,0,138	0/0:23,0:23:27.04:0,27,925	0/0:30,0:30:57.15:0,57,2367	0/0:24,0:24:45.08:0,45,1651	0/0:25,0:25:51.12:0,51,2006	0/0:25,0:25:48.16:0,48,1937	0/0:29,0:29:63.20:0,63,3257	0/0:14,0:14:27.09:0,27,1440	0/0:30,0:30:69.22:0,69,2929	0/0:24,0:24:45.12:0,45,2011	0/0:5,0:5:12.04:0,12,609
chr10	57709861	.	GTGAGGGTTGACTTCATCAGT	G	26367.31	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=17.076;DP=522;FS=0.000;HRun=0;HaplotypeScore=293.9793;InbreedingCoeff=0.9649;MQ=89.57;MQ0=0;MQRankSum=-15.614;QD=147.30;ReadPosRankSum=3.758;VQSLOD=4.1019;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:90.31:0,90,8407	1/1:0,7:7:21.07:1223,21,0	0/0:25,0:25:72.22:0,72,3941	0/0:21,0:21:63.22:0,63,3778	0/0:26,0:26:75.26:0,75,6906	0/0:30,0:30:87.30:0,87,7421	0/0:22,0:22:66.23:0,66,6223	1/1:0,17:17:48.13:2115,48,0	1/1:0,25:25:69.24:4017,69,0	1/1:0,19:19:57.20:2941,57,0	1/1:0,9:9:15.05:873,15,0	0/0:26,0:26:75.26:0,75,6352	0/0:37,0:37:99:0,111,10105	0/0:16,0:16:48.16:0,48,4665	1/1:0,20:20:51.18:2969,51,0	0/0:16,0:16:45.15:0,45,3686	1/1:0,7:7:9.03:524,9,0	0/0:27,0:27:81.28:0,81,7640	1/1:0,5:5:15.05:872,15,0	1/1:0,14:14:39.13:2211,39,0	1/1:1,3:4:9.03:495,9,0	0/0:23,0:23:69.24:0,69,6259	0/0:16,0:16:48.16:0,48,4606	0/0:25,0:25:75.26:0,75,6596	1/1:0,14:14:36.12:2096,36,0	1/1:1,16:17:51.17:2714,51,0	1/1:0,19:19:51.18:2969,51,0	1/1:0,2:2:6.02:349,6,0
chr10	57710793	.	A	AT	7424.08	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-11.348;DP=654;FS=2.710;HRun=9;HaplotypeScore=72.8302;InbreedingCoeff=0.9723;MQ=78.50;MQ0=6;MQRankSum=-0.426;QD=23.87;ReadPosRankSum=0.970;VQSLOD=5.7596;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,130,1280	1/1:0,9:9:18.05:196,18,0	0/0:23,0:19:3.35:0,3,220	0/0:21,0:18:25.58:0,26,167	0/0:31,1:31:53.79:0,54,695	0/0:15,0:15:38.97:0,39,337	0/0:27,0:26:68.98:0,69,599	1/1:6,16:21:48.01:502,48,0	1/1:0,16:16:48.13:531,48,0	1/1:3,18:21:50.93:544,51,0	1/1:1,20:21:60.16:658,60,0	0/0:27,0:27:74.98:0,75,651	0/0:18,0:18:47.39:0,47,416	0/0:16,0:16:38.99:0,39,338	1/1:1,14:14:33.09:365,33,0	0/0:3,0:12:14.26:0,14,42	1/1:3,30:33:75.04:811,75,0	0/0:2,0:20:32.59:0,33,96	1/1:6,18:24:34.04:579,34,0	1/1:4,20:23:57.07:603,57,0	1/1:3,20:23:45.12:498,45,0	0/0:27,0:27:71.29:0,71,599	0/0:19,0:19:50.98:0,51,443	0/0:30,0:30:80.94:0,81,694	1/1:5,19:23:54.13:589,54,0	1/1:8,24:32:75.41:807,75,0	1/1:5,26:30:35.26:546,35,0	1/1:1,14:14:18.05:197,18,0
chr10	57711590	.	T	TA	11876.25	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-13.491;DP=560;FS=1.668;HRun=8;HaplotypeScore=49.2041;InbreedingCoeff=0.9889;MQ=71.37;MQ0=0;MQRankSum=-0.366;QD=28.76;ReadPosRankSum=0.571;VQSLOD=5.0024;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,27:32:50.73:823,51,0	1/1:1,3:4:12.03:136,12,0	0/0:10,0:11:22.78:0,23,177	0/0:7,0:7:13.56:0,14,113	1/1:3,30:33:87.26:1004,87,0	0/0:19,0:19:48.02:0,48,439	0/0:13,0:13:32.98:0,33,293	1/1:8,22:30:66.16:740,66,0	1/1:1,20:21:54.16:623,54,0	1/1:2,19:21:57.17:658,57,0	1/1:3,26:29:72.21:828,72,0	0/0:16,0:16:41.99:0,42,375	0/0:19,0:19:51.02:0,51,463	0/0:19,0:19:54.03:0,54,494	1/1:3,19:22:57.17:658,57,0	1/1:1,11:12:30.09:346,30,0	1/1:3,29:32:78.23:900,78,0	1/1:2,15:17:45.13:519,45,0	1/1:4,16:20:45.05:467,45,0	1/1:6,23:29:72.21:826,72,0	1/1:1,5:6:15.04:173,15,0	0/0:12,0:12:33.01:0,33,299	0/0:22,0:22:59.99:0,60,537	0/0:9,0:8:24:0,24,216	1/1:3,27:30:81.24:935,81,0	1/1:4,27:31:81.23:925,81,0	1/1:1,22:23:57.17:658,57,0	1/1:0,21:21:57.17:658,57,0
chr10	57712487	.	A	AG	4291.67	PASS	AB=0.738;AC=29;AF=0.537;AN=54;BaseQRankSum=-7.588;DP=604;FS=56.026;HRun=9;HaplotypeScore=86.7083;InbreedingCoeff=0.6060;MQ=85.58;MQ0=0;MQRankSum=-2.257;QD=11.66;ReadPosRankSum=0.287;VQSLOD=-0.1986;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:15,19:34:30.07:324,30,0	0/1:1,5:6:2.62:88,0,3	0/0:31,0:33:60.99:0,61,470	0/0:25,0:24:27.57:0,28,223	1/1:7,7:14:9.02:100,9,0	0/0:14,0:14:29.94:0,30,253	0/0:22,0:23:58.88:0,59,486	1/1:9,13:22:6.87:304,7,0	1/1:6,17:23:21.04:224,21,0	1/1:10,6:16:3.23:121,3,0	0/1:7,5:12:21.93:141,0,22	0/0:25,0:25:47.91:0,48,405	0/0:22,0:22:50.94:0,51,436	0/0:25,0:25:44.97:0,45,390	1/1:6,24:30:18.98:422,19,0	0/1:16,1:17:16.31:16,0,59	1/1:10,24:35:47.95:504,48,0	1/1:6,20:26:39.11:431,39,0	0/1:7,3:10:37.98:81,0,38	1/1:8,6:14:12.92:134,13,0	1/1:22,36:60:38.11:855,38,0	0/0:13,0:13:26.98:0,27,234	0/0:9,0:9:21:0,21,182	0/0:45,0:45:99:0,117,1010	0/1:5,3:8:14.03:80,0,14	1/1:8,7:15:14.97:135,15,0	1/1:11,15:26:30.08:332,30,0	./.
chr10	57715032	.	G	GA	2274.45	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-7.991;DP=642;FS=6.553;HRun=9;HaplotypeScore=61.4745;InbreedingCoeff=0.9810;MQ=75.56;MQ0=1;MQRankSum=-0.281;QD=22.74;ReadPosRankSum=1.350;VQSLOD=4.5944;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,35:39:70.20:1003,70,0	0/0:6,0:6:18:0,18,156	0/0:33,0:25:10.06:0,10,310	0/0:21,0:10:17.17:0,17,137	1/1:2,20:23:34.07:591,34,0	0/0:18,0:18:50.99:0,51,441	0/0:24,0:24:50.94:0,51,438	0/0:30,0:31:77.02:0,77,656	0/0:20,0:20:53.97:0,54,465	0/0:19,0:19:47.97:0,48,414	0/0:17,0:17:41.97:0,42,362	0/0:29,0:29:56.77:0,57,566	0/0:10,0:10:23.97:0,24,205	0/0:17,0:17:38.98:0,39,339	0/0:25,0:25:62.98:0,63,547	1/1:4,17:21:26.23:476,26,0	0/0:20,0:20:56.99:0,57,495	1/1:5,12:17:33.09:365,33,0	0/0:26,0:26:62.98:0,63,547	0/0:33,0:33:80.96:0,81,702	0/0:26,0:26:71.97:0,72,625	0/0:27,0:27:66.83:0,67,571	0/0:27,0:27:74.97:0,75,651	0/0:20,0:20:59.99:0,60,521	0/0:24,0:24:68.97:0,69,595	0/0:23,0:23:47.97:0,48,417	0/0:29,0:29:77.96:0,78,674	0/0:17,0:17:44.97:0,45,391
chr10	57715480	.	CG	C	4732.76	PASS	AB=0.986;AC=31;AF=0.554;AN=56;BaseQRankSum=-1.001;DP=551;FS=0.795;HRun=8;HaplotypeScore=68.8624;InbreedingCoeff=0.7383;MQ=64.11;MQ0=30;MQRankSum=0.500;QD=14.65;ReadPosRankSum=-1.485;VQSLOD=4.5350;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:31:31.45:31,0,80	1/1:0,5:5:9.01:87,9,0	0/0:35,0:13:19.39:0,19,151	0/0:37,0:11:16.37:0,16,142	0/1:22,1:22:29.97:77,0,30	0/0:13,1:14:7.13:0,7,345	0/0:25,0:23:39.74:0,40,395	1/1:5,16:20:47.48:354,47,0	1/1:3,16:18:39:365,39,0	1/1:3,16:17:47.75:418,48,0	1/1:7,15:18:39.01:366,39,0	0/0:11,0:11:21:0,21,214	0/0:17,0:17:45.07:0,45,484	0/0:18,0:18:36.09:0,36,408	1/1:1,11:12:33.05:318,33,0	0/1:14,0:14:20.74:67,0,21	1/1:6,13:19:50.99:466,51,0	0/0:18,0:18:22.85:0,23,202	1/1:13,4:15:5.91:167,6,0	1/1:12,24:33:56.81:531,57,0	1/1:5,6:9:12.01:116,12,0	0/0:20,0:21:51.01:0,51,582	0/0:15,0:15:38.98:0,39,401	0/0:16,1:17:14.44:0,14,411	1/1:2,19:22:44.10:411,44,0	1/1:5,14:19:44.96:404,45,0	1/1:1,19:21:41.10:381,41,0	1/1:3,6:6:18.03:174,18,0
chr10	57715488	.	GAA	G	361.34	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=0.862;DP=566;FS=3.453;HRun=10;HaplotypeScore=98.6926;InbreedingCoeff=0.8947;MQ=72.78;MQ0=26;MQRankSum=-0.134;QD=22.58;ReadPosRankSum=1.295;VQSLOD=3.3214;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:31:82.14:0,82,1182	0/0:5,0:5:9.02:0,9,94	0/0:42,0:21:55.07:0,55,592	0/0:41,0:17:38.38:0,38,399	0/0:21,0:22:57.13:0,57,763	0/0:16,0:16:47.73:0,48,678	0/0:19,0:18:36.08:0,36,540	0/0:27,0:26:48.49:0,48,595	0/0:18,0:17:13.26:0,13,323	0/0:19,0:18:42.08:0,42,448	0/0:19,0:15:38.94:0,39,377	0/0:7,0:7:15.04:0,15,217	0/0:15,0:15:36.12:0,36,569	0/0:16,0:16:39.12:0,39,594	0/0:12,0:12:36.07:0,36,380	0/0:19,0:19:48.16:0,48,687	0/0:21,0:21:54.05:0,54,581	1/1:2,14:16:42.09:456,42,0	0/0:18,0:17:23.52:0,24,480	0/0:34,0:31:72.09:0,72,788	0/0:10,0:8:17.87:0,18,164	0/0:18,0:18:51.17:0,51,774	0/0:16,0:16:39.09:0,39,584	0/0:17,0:18:44.51:0,45,648	0/0:29,0:28:67.77:0,68,780	0/0:21,0:21:32.12:0,32,487	0/0:21,0:21:44.93:0,45,427	0/0:10,0:6:18.04:0,18,188
chr10	57718328	.	AG	A	8533.75	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=6.012;DP=515;FS=17.395;HRun=2;HaplotypeScore=55.8466;InbreedingCoeff=0.9982;MQ=62.80;MQ0=0;MQRankSum=3.034;QD=36.01;ReadPosRankSum=1.547;VQSLOD=3.1604;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:75.25:0,75,1122	1/1:0,8:8:21.07:272,21,0	0/0:17,0:17:51.17:0,51,754	0/0:18,0:18:51.15:0,51,708	0/0:10,0:10:30.10:0,30,449	0/0:22,0:22:63.20:0,63,923	0/0:22,0:22:66.21:0,66,961	1/1:1,19:20:57.17:727,57,0	1/1:0,18:18:45.15:584,45,0	1/1:0,17:17:51.16:649,51,0	1/1:0,14:14:39.13:503,39,0	0/0:21,0:21:63.21:0,63,944	0/0:21,0:21:60.20:0,60,895	0/0:16,0:16:48.16:0,48,706	1/1:0,17:17:51.17:662,51,0	0/0:28,0:28:84.28:0,84,1238	1/1:0,22:22:60.20:779,60,0	0/0:13,0:13:36.12:0,36,540	1/1:0,15:15:45.15:583,45,0	1/1:1,7:8:18.06:230,18,0	1/1:0,26:26:66.21:857,66,0	0/0:15,0:15:42.14:0,42,622	0/0:14,0:14:39.12:0,39,564	0/0:33,0:33:93.32:0,93,1394	1/1:0,14:14:42.14:545,42,0	1/1:0,23:23:66.21:856,66,0	1/1:1,21:22:60.20:779,60,0	1/1:0,13:13:39.13:506,39,0
chr10	57718416	.	GGT	G	243.14	PASS	AB=0.890;AC=13;AF=0.283;AN=46;BaseQRankSum=4.241;DP=487;FS=0.000;HRun=0;HaplotypeScore=74.2199;InbreedingCoeff=0.3653;MQ=55.03;MQ0=27;MQRankSum=0.631;QD=1.90;ReadPosRankSum=0.622;VQSLOD=1.4293;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:38:21:0,21,206	1/1:1,0:2:2.84:14,3,0	./.	./.	0/0:20,0:18:2.75:0,3,20	0/0:21,0:21:24.05:0,24,307	0/0:19,0:18:3.01:0,3,44	./.	0/0:13,0:13:1.82:0,2,5	./.	1/1:13,0:13:2.94:18,3,0	0/0:17,0:17:12.04:0,12,169	0/0:8,0:9:9.02:0,9,114	0/1:5,1:6:25.95:26,0,37	0/0:11,0:11:18.03:0,18,224	1/1:10,0:12:8.39:42,8,0	1/1:29,5:34:1.07:169,1,0	0/0:12,0:12:19.24:0,19,218	0/0:21,0:20:6.01:0,6,69	0/0:11,0:10:9.02:0,9,113	0/1:33,0:34:10.19:10,0,153	0/0:14,0:14:9.47:0,9,95	./.	0/0:33,0:33:39.10:0,39,518	1/1:11,0:13:11.36:56,11,0	0/0:23,0:22:1.25:0,1,3	0/1:11,2:13:45.90:46,0,138	0/0:7,0:7:9.02:0,9,113
chr10	57719573	.	AACTC	A	1360.08	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.501;DP=713;FS=9.003;HRun=0;HaplotypeScore=111.7314;InbreedingCoeff=0.8200;MQ=59.02;MQ0=7;MQRankSum=-0.513;QD=46.90;ReadPosRankSum=0.123;VQSLOD=4.0875;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:59,0:59:99:0,166,4244	0/0:8,0:8:24.08:0,24,640	0/0:13,0:9:3.01:0,3,234	0/0:17,0:11:11.70:0,12,284	0/0:30,0:30:78.27:0,78,2057	0/0:21,0:21:63.22:0,63,1631	0/0:27,0:27:81.28:0,81,2095	0/0:26,0:23:60.21:0,60,1586	0/0:30,0:30:90.28:0,90,2289	0/0:29,0:29:87.29:0,87,2266	0/0:21,0:21:54.19:0,54,1408	0/0:26,0:26:75.26:0,75,1992	0/0:19,0:19:54.19:0,54,1438	0/0:19,0:19:54.19:0,54,1397	0/0:20,0:20:57.20:0,57,1513	1/1:1,28:29:78.27:1455,78,0	0/0:37,0:37:99:0,108,2813	0/0:33,0:33:93.32:0,93,2457	0/0:23,0:20:57.15:0,57,1452	0/0:27,0:27:75.07:0,75,1999	0/0:39,0:39:99:0,111,2953	0/0:27,0:27:72.25:0,72,1917	0/0:26,0:26:69.22:0,69,1753	0/0:29,0:29:81.28:0,81,2161	0/0:23,0:23:66.23:0,66,1752	0/0:23,0:23:63.21:0,63,1628	0/0:26,0:26:72.23:0,72,1856	0/0:6,0:6:18.06:0,18,473
chr10	57721075	.	GATTT	G	1138.44	PASS	AB=0.909;AC=23;AF=0.523;AN=44;BaseQRankSum=5.315;DP=267;FS=1.788;HRun=0;HaplotypeScore=54.4134;InbreedingCoeff=0.6079;MQ=64.62;MQ0=3;MQRankSum=0.570;QD=10.44;ReadPosRankSum=-0.298;VQSLOD=2.0987;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:19:15.05:0,15,248	0/0:7,0:7:12.04:0,12,285	./.	./.	0/0:5,0:9:15.03:0,15,234	0/1:9,1:10:38.13:38,0,74	./.	0/0:44,0:40:21.02:0,21,363	1/1:1,1:2:3.01:47,3,0	1/1:6,1:7:3.01:47,3,0	1/1:6,1:7:3.01:47,3,0	0/0:7,0:7:18.06:0,18,427	0/0:4,0:4:6.02:0,6,142	0/0:6,0:6:6.02:0,6,141	1/1:6,2:8:6.02:94,6,0	1/1:3,0:4:3:28,3,0	0/0:42,0:42:99:0,99,2321	1/1:10,0:15:6.89:58,7,0	1/1:10,6:15:18.03:238,18,0	./.	./.	0/0:2,0:2:3.01:0,3,71	0/0:5,0:5:3.01:0,3,71	./.	1/1:7,4:11:12.04:189,12,0	1/1:4,6:10:18.06:283,18,0	1/1:7,5:12:9.03:138,9,0	1/1:5,2:7:6.02:94,6,0
chr10	57721501	.	A	AAACCCATAT	17171.36	PASS	AB=1.000;AC=32;AF=0.571;AN=56;BaseQRankSum=-8.471;DP=531;FS=0.382;HRun=0;HaplotypeScore=123.1899;InbreedingCoeff=0.6870;MQ=68.52;MQ0=1;MQRankSum=-8.040;QD=49.49;ReadPosRankSum=-0.450;VQSLOD=4.4890;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:27:99:707,0,189	1/1:5,0:5:14.95:143,15,0	0/0:23,0:22:47.27:0,47,652	0/0:23,0:22:51.01:0,51,568	0/1:15,0:14:99:620,0,110	0/0:24,0:24:72.15:0,72,1755	0/0:15,0:15:33.06:0,33,717	1/1:34,0:39:96.01:1814,96,0	1/1:7,16:23:30.10:1369,30,0	1/1:1,17:19:45:1357,45,0	1/1:5,14:21:44.83:1573,45,0	0/0:14,0:14:36.07:0,36,840	0/0:7,0:7:21.05:0,21,549	0/0:17,0:17:48.15:0,48,1327	1/1:0,13:14:15.05:714,15,0	0/1:15,0:15:99:503,0,148	1/1:4,15:21:15.05:714,15,0	0/1:19,0:17:99:293,0,105	1/1:8,14:27:69.02:1552,69,0	1/1:2,13:16:26.89:859,27,0	1/1:5,13:19:9.03:428,9,0	0/0:19,0:19:51.01:0,51,1119	0/0:16,0:16:48.15:0,48,1315	0/0:26,0:26:72.08:0,72,1741	1/1:2,9:11:15.05:714,15,0	1/1:3,23:27:71.92:2091,72,0	1/1:4,10:15:27.09:1148,27,0	1/1:0,8:12:12.04:571,12,0
chr10	57721526	.	C	CATAACCCAT	12505.05	PASS	AB=0.996;AC=23;AF=0.411;AN=56;BaseQRankSum=7.397;DP=469;FS=1.307;HRun=0;HaplotypeScore=121.8626;InbreedingCoeff=0.0415;MQ=82.09;MQ0=1;MQRankSum=-11.429;QD=41.96;ReadPosRankSum=2.596;VQSLOD=4.4682;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,13:22:27.09:1296,27,0	0/1:9,0:9:9.99:10,0,84	0/0:19,0:19:53.45:0,53,659	0/0:18,0:18:35.78:0,36,346	1/1:4,16:22:41.67:1127,42,0	0/0:22,0:22:63.17:0,63,1720	0/0:9,0:9:27.03:0,27,684	0/1:49,0:48:99:582,0,609	0/1:16,1:17:99:851,0,115	0/1:13,0:13:73.87:840,0,74	0/1:16,0:16:76.83:1028,0,77	0/0:11,0:11:33.09:0,33,830	0/0:9,0:9:27.05:0,27,625	0/0:20,0:20:60.14:0,60,1475	1/1:8,0:8:15.05:537,15,0	1/1:5,9:14:30.06:1147,30,0	0/1:12,0:12:73.90:402,0,74	1/1:4,8:13:16.30:673,16,0	0/1:28,0:28:99:588,0,382	0/1:10,0:10:56.90:509,0,57	0/1:13,0:13:99:190,0,108	0/0:20,0:20:45.09:0,45,1072	0/0:18,0:18:54.13:0,54,1409	0/0:25,0:25:69.17:0,69,1788	0/1:10,0:10:45.92:511,0,46	0/1:16,0:16:26.69:1215,0,27	0/1:16,0:16:99:591,0,144	0/1:7,0:7:28.94:408,0,29
chr10	57722533	.	TCA	T	1671.16	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=10.064;DP=573;FS=11.270;HRun=0;HaplotypeScore=139.2775;InbreedingCoeff=0.9927;MQ=55.25;MQ0=2;MQRankSum=-5.111;QD=23.87;ReadPosRankSum=2.350;VQSLOD=4.2320;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,22:21:33.11:495,33,0	0/0:10,0:10:30.08:0,30,570	0/0:23,0:11:33.11:0,33,657	0/0:20,0:7:17.94:0,18,241	1/1:4,22:26:48.07:668,48,0	0/0:14,0:14:42.12:0,42,770	0/0:21,0:20:60.18:0,60,1141	0/0:26,0:24:69.21:0,69,1304	0/0:18,0:18:51.15:0,51,940	0/0:24,0:24:72.23:0,72,1365	0/0:26,0:26:78.25:0,78,1514	0/0:13,0:13:39.11:0,39,720	0/0:14,0:14:42.13:0,42,781	0/0:17,0:17:51.16:0,51,998	0/0:13,0:13:39.09:0,39,683	1/1:0,10:10:30.10:448,30,0	0/0:26,0:26:72.23:0,72,1426	1/1:0,12:11:15.05:220,15,0	0/0:28,0:26:78.24:0,78,1508	0/0:33,0:33:96.32:0,96,1890	0/0:17,0:17:44.76:0,45,912	0/0:24,0:24:69.21:0,69,1317	0/0:16,0:16:48.13:0,48,889	0/0:35,0:35:99:0,105,1950	0/0:21,0:21:60.17:0,60,1132	0/0:24,0:24:72.24:0,72,1416	0/0:29,0:29:84.26:0,84,1608	0/0:11,0:11:33.11:0,33,645
chr10	57723174	.	A	AACAC	1611.17	PASS	AB=0.892;AC=22;AF=0.440;AN=50;BaseQRankSum=-2.556;DP=481;FS=0.000;HRun=0;HaplotypeScore=103.7963;InbreedingCoeff=0.2757;MQ=59.70;MQ0=22;MQRankSum=1.448;QD=6.74;ReadPosRankSum=-0.261;VQSLOD=2.1913;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:21,0:21:59.01:124,0,59	1/1:3,0:3:3.01:52,3,0	./.	./.	0/0:13,0:13:9.50:0,10,137	0/0:19,0:16:17.05:0,17,188	0/0:28,0:26:17.99:0,18,173	./.	1/1:10,0:10:4.57:60,5,0	1/1:18,0:18:9.17:149,9,0	1/1:14,0:13:18.02:228,18,0	0/0:12,0:12:11.96:0,12,114	0/0:8,0:8:1.82:0,2,5	0/0:8,0:8:6.96:0,7,93	0/1:19,1:18:52.09:79,0,52	0/0:10,0:14:12:0,12,108	0/1:17,0:27:11.86:99,0,12	0/0:15,0:16:9.48:0,9,83	1/1:16,0:13:3:28,3,0	0/1:10,8:17:20.11:297,0,20	1/1:29,0:28:10.76:199,11,0	0/0:18,0:21:9.01:0,9,84	0/0:11,0:10:6.02:0,6,91	0/0:22,0:23:2.60:0,3,114	0/1:16,0:15:33.39:91,0,33	0/1:17,0:17:24.92:176,0,25	1/1:20,0:20:16.08:189,16,0	1/1:7,0:5:1.44:3,1,0
chr10	57723654	.	AT	A	7001.60	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=13.066;DP=523;FS=10.895;HRun=10;HaplotypeScore=77.9925;InbreedingCoeff=0.9747;MQ=64.18;MQ0=4;MQRankSum=0.241;QD=18.82;ReadPosRankSum=1.466;VQSLOD=5.0811;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,38:42:65.78:795,66,0	1/1:2,11:12:29.99:260,30,0	0/0:9,0:7:5.99:0,6,51	0/0:17,0:14:18.84:0,19,272	1/1:3,16:19:47.96:412,48,0	0/0:16,0:16:45.10:0,45,480	0/0:19,0:19:51.14:0,51,561	1/1:5,25:29:65.93:563,66,0	1/1:2,19:21:53.99:468,54,0	1/1:1,24:25:68.94:588,69,0	1/1:5,10:15:20.90:172,21,0	0/0:12,0:12:33.09:0,33,363	0/0:9,0:9:15.02:0,15,156	0/0:10,0:10:27.07:0,27,293	1/1:2,18:19:29.98:261,30,0	1/1:1,13:14:29.99:260,30,0	1/1:6,34:38:86.08:756,86,0	1/1:0,19:19:47.99:416,48,0	1/1:4,20:23:56.97:490,57,0	1/1:3,16:18:35.89:311,36,0	1/1:0,9:9:24:208,24,0	0/0:19,0:19:54.13:0,54,588	0/0:18,0:18:42.06:0,42,444	0/0:22,0:21:60.16:0,60,664	1/1:4,11:15:26.99:234,27,0	1/1:5,17:21:47.98:417,48,0	1/1:1,15:16:32.97:286,33,0	1/1:0,7:7:12:104,12,0
chr10	57723814	.	A	AT	13461.89	PASS	AB=1.000;AC=53;AF=0.946;AN=56;BaseQRankSum=-0.473;DP=365;FS=3.001;HRun=2;HaplotypeScore=166.8276;InbreedingCoeff=0.4211;MQ=41.75;MQ0=1;MQRankSum=-2.426;QD=37.09;ReadPosRankSum=2.207;VQSLOD=4.3004;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,23:25:66.22:956,66,0	1/1:1,5:6:18.06:241,18,0	0/0:2,0:1:2.22:0,2,7	0/1:6,0:4:11.01:11,0,23	1/1:1,24:25:60.20:859,60,0	1/1:2,9:11:30.10:437,30,0	1/1:3,11:14:33.07:468,33,0	1/1:5,20:23:48.12:690,48,0	1/1:2,14:15:45.15:654,45,0	1/1:2,22:24:69.23:1018,69,0	1/1:3,12:15:39.13:572,39,0	1/1:1,11:12:36.12:533,36,0	1/1:0,4:4:12.04:179,12,0	1/1:1,8:9:24.08:354,24,0	1/1:1,12:12:33.11:483,33,0	1/1:0,11:10:30.10:443,30,0	1/1:2,5:7:15.05:224,15,0	1/1:3,9:12:30.07:425,30,0	1/1:1,12:13:33.11:493,33,0	1/1:1,23:24:69.23:1021,69,0	1/1:2,3:5:8.99:105,9,0	1/1:0,8:8:24.08:347,24,0	1/1:1,14:15:39.13:569,39,0	1/1:0,8:8:19.30:259,19,0	1/1:3,17:20:57.14:799,57,0	1/1:2,12:14:39.10:541,39,0	1/1:2,13:14:39.10:556,39,0	1/1:0,5:5:15.05:224,15,0
chr10	57723833	.	G	GT	13853.62	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=0.306;DP=354;FS=8.174;HRun=1;HaplotypeScore=164.2457;InbreedingCoeff=0.7007;MQ=48.00;MQ0=1;MQRankSum=-3.415;QD=40.87;ReadPosRankSum=1.715;VQSLOD=3.4475;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,24:26:66.23:1050,66,0	1/1:1,7:7:18.06:287,18,0	0/0:4,0:3:4.98:0,5,50	0/0:11,0:7:5.20:0,5,46	1/1:1,22:23:66.22:1048,66,0	1/1:0,8:9:24.08:383,24,0	1/1:2,8:9:21.07:335,21,0	1/1:4,20:22:66.13:966,66,0	1/1:2,12:14:36.12:571,36,0	1/1:0,25:25:75.26:1194,75,0	1/1:1,16:17:42.14:669,42,0	1/1:1,11:12:33.11:526,33,0	1/1:0,3:3:9.03:143,9,0	1/1:0,8:8:24.08:382,24,0	1/1:0,12:12:33.11:525,33,0	1/1:4,13:15:36.12:574,36,0	1/1:2,5:6:12.04:191,12,0	1/1:0,10:10:30.06:451,30,0	1/1:1,8:8:24.08:383,24,0	1/1:2,17:19:48.14:739,48,0	1/1:0,3:3:9.03:143,9,0	1/1:1,8:9:14.10:238,14,0	1/1:1,13:14:39.13:619,39,0	1/1:1,9:9:22.32:337,22,0	1/1:0,16:16:45.15:717,45,0	1/1:0,17:17:51.17:811,51,0	1/1:1,13:13:33.11:523,33,0	1/1:2,1:3:3.01:48,3,0
chr10	57723838	.	C	CT	1216.07	PASS	AB=0.966;AC=23;AF=0.411;AN=56;BaseQRankSum=0.224;DP=367;FS=2.018;HRun=11;HaplotypeScore=210.2828;InbreedingCoeff=0.5661;MQ=49.04;MQ0=2;MQRankSum=-0.827;QD=8.05;ReadPosRankSum=-0.981;VQSLOD=0.0047;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:26:12.68:0,13,123	1/1:8,0:7:2.20:7,2,0	1/1:6,0:4:3.22:12,3,0	0/0:11,0:7:9.30:0,9,60	0/0:24,0:25:30.88:0,31,163	1/1:2,6:8:12.45:167,12,0	1/1:5,5:10:14.43:155,14,0	0/0:27,0:25:30.64:0,31,190	0/1:14,0:14:1.44:1,0,16	0/1:23,3:26:92.50:92,0,94	0/1:17,0:17:17.41:17,0,20	1/1:6,7:13:18.37:173,18,0	1/1:2,3:5:9.02:88,9,0	1/1:3,4:8:11.60:126,12,0	0/0:14,0:14:5.59:0,6,50	0/0:17,0:15:16.90:0,17,84	0/0:7,0:5:2.60:0,3,5	0/0:9,0:10:10.32:0,10,38	0/0:9,0:8:5.32:0,5,65	0/0:17,0:17:5.97:0,6,67	0/0:3,0:3:2.53:0,3,23	1/1:3,7:10:20.64:161,21,0	1/1:5,9:14:29.86:266,30,0	1/1:5,6:10:16.19:135,16,0	0/0:16,0:16:11.24:0,11,78	0/0:17,0:17:4.89:0,5,51	0/0:14,0:13:4.11:0,4,30	0/0:2,1:3:2.13:0,2,5
chr10	57723849	.	TC	T	1879.03	PASS	AB=1.000;AC=31;AF=0.554;AN=56;BaseQRankSum=-1.112;DP=354;FS=7.656;HRun=1;HaplotypeScore=182.4859;InbreedingCoeff=0.4314;MQ=47.77;MQ0=7;MQRankSum=-0.419;QD=7.73;ReadPosRankSum=-2.456;VQSLOD=-0.3534;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,19:23:65.18:567,65,0	0/0:8,0:7:10.41:0,10,38	1/1:9,0:3:0.84:4,1,0	0/0:15,0:8:9.47:0,9,89	1/1:2,20:22:55.73:437,56,0	1/1:7,0:7:3.42:38,3,0	1/1:11,0:10:2.36:44,2,0	0/1:23,0:21:1.78:2,0,178	0/0:14,0:13:4.25:0,4,43	0/1:24,0:24:18.35:18,0,153	0/1:18,0:18:18.77:19,0,82	1/1:11,0:11:10.24:67,10,0	1/1:6,0:6:5.93:30,6,0	1/1:8,0:8:5.65:38,6,0	0/0:14,0:13:3.77:0,4,82	1/1:2,13:13:29.32:292,29,0	0/0:7,0:5:7.85:0,8,32	1/1:3,6:9:22.76:218,23,0	0/1:9,0:8:15.18:15,0,45	0/0:15,0:15:12.74:0,13,84	0/0:2,0:2:5.50:0,6,41	1/1:11,0:11:13.51:62,14,0	1/1:11,0:11:17.82:85,18,0	1/1:9,0:8:15.88:69,16,0	0/0:16,0:16:3.92:0,4,134	0/0:17,0:17:15.24:0,15,149	0/1:17,0:16:56.18:56,0,67	0/0:3,0:3:4.87:0,5,17
chr10	57723850	.	C	CT	7126.58	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-1.348;DP=367;FS=1.739;HRun=11;HaplotypeScore=170.2097;InbreedingCoeff=0.6541;MQ=47.32;MQ0=9;MQRankSum=-0.287;QD=20.90;ReadPosRankSum=1.129;VQSLOD=3.5899;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:22,1:23:45.77:345,46,0	1/1:0,8:7:18.03:215,18,0	0/0:10,0:3:2.68:0,3,11	0/0:16,0:8:6.80:0,7,74	1/1:22,0:22:25.28:160,25,0	1/1:1,6:7:19.86:209,20,0	1/1:2,10:11:27.07:302,27,0	1/1:10,12:21:39.21:426,39,0	1/1:4,9:13:32.88:358,33,0	1/1:6,18:24:55.89:619,56,0	1/1:4,14:18:44.60:484,45,0	1/1:4,6:12:28.90:257,29,0	1/1:1,5:6:9.50:103,9,0	1/1:4,4:8:15.03:158,15,0	1/1:4,9:13:26.66:279,27,0	1/1:15,1:14:34.56:279,35,0	1/1:2,5:5:13.59:147,14,0	1/1:10,0:10:14.81:137,15,0	1/1:6,5:10:20.96:200,21,0	1/1:5,9:14:29.82:336,30,0	1/1:1,1:2:3.01:35,3,0	1/1:2,10:12:29.36:308,29,0	1/1:5,6:11:21.40:216,21,0	1/1:3,5:8:11.94:111,12,0	1/1:8,13:20:45.12:510,45,0	1/1:5,11:16:33.02:385,33,0	1/1:5,13:17:43.63:474,44,0	1/1:0,3:3:6.02:73,6,0
chr10	57723856	.	C	CT	6971.73	PASS	AC=52;AF=0.963;AN=54;BaseQRankSum=-0.632;DP=361;FS=0.000;HRun=6;HaplotypeScore=157.3953;InbreedingCoeff=0.4374;MQ=44.40;MQ0=12;MQRankSum=2.037;QD=20.69;ReadPosRankSum=0.566;VQSLOD=2.9144;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,17:22:47.16:346,47,0	1/1:2,7:8:20.51:215,21,0	./.	0/0:15,0:7:1.17:0,1,45	1/1:5,17:22:33.17:186,33,0	1/1:3,6:9:15.93:172,16,0	1/1:4,9:12:27.08:314,27,0	1/1:12,11:18:35.07:374,35,0	1/1:3,10:12:31.85:326,32,0	1/1:9,14:23:52.18:553,52,0	1/1:4,13:17:39.91:401,40,0	1/1:5,7:12:22.13:233,22,0	1/1:2,4:6:7.57:72,8,0	1/1:8,4:12:18.52:203,19,0	1/1:4,9:12:24.06:270,24,0	1/1:4,13:15:35.67:335,36,0	1/1:4,5:7:21.05:237,21,0	1/1:4,8:12:14.44:182,14,0	1/1:4,5:8:15.04:172,15,0	1/1:3,10:13:32.75:331,33,0	1/1:0,1:1:3.01:34,3,0	1/1:2,10:12:29.36:310,29,0	1/1:0,8:8:24.06:269,24,0	1/1:3,4:6:11.97:123,12,0	1/1:4,15:18:36.73:396,37,0	1/1:5,8:13:33.81:343,34,0	1/1:6,13:18:46.33:506,46,0	1/1:1,3:3:6.02:69,6,0
chr10	57725794	.	CAGAGAGACAG	C	2952.68	PASS	AB=0.893;AC=30;AF=0.577;AN=52;BaseQRankSum=6.201;DP=477;FS=51.985;HRun=0;HaplotypeScore=134.4038;InbreedingCoeff=0.6469;MQ=44.13;MQ0=30;MQRankSum=-4.871;QD=12.78;ReadPosRankSum=-1.505;VQSLOD=0.2018;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:15,0:15:0:0,0,0	0/0:5,0:4:0.47:0,0,1	./.	./.	0/0:15,0:14:0:0,0,0	0/0:21,0:20:19.29:0,19,610	0/0:34,0:32:45.14:0,45,940	1/1:27,0:23:39.09:470,39,0	1/1:4,8:12:3.01:39,3,0	1/1:5,8:11:17.75:288,18,0	1/1:11,1:10:3.01:45,3,0	0/0:24,0:23:46.33:0,46,1024	0/0:21,0:21:42.14:0,42,1354	0/0:18,0:18:30.57:0,31,914	1/1:8,11:19:3.01:40,3,0	1/1:7,2:9:8.97:140,9,0	1/1:17,1:16:14.78:178,15,0	1/1:9,0:7:2.19:60,2,0	0/1:8,3:7:62.71:229,0,63	1/1:11,0:9:6.02:104,6,0	1/1:26,0:22:12.04:277,12,0	0/0:14,0:13:14.78:0,15,396	0/0:18,0:18:42.12:0,42,958	0/0:41,0:40:80.69:0,81,2321	1/1:4,1:4:4.57:68,5,0	1/1:8,17:23:54.18:932,54,0	1/1:4,10:15:11.92:195,12,0	1/1:3,0:3:3.01:63,3,0
chr10	57725802	.	CAG	C	1047.77	PASS	AB=0.995;AC=18;AF=0.333;AN=54;BaseQRankSum=6.952;DP=478;FS=10.030;HRun=0;HaplotypeScore=99.6360;InbreedingCoeff=-0.0812;MQ=44.82;MQ0=29;MQRankSum=-5.709;QD=5.09;ReadPosRankSum=-1.987;VQSLOD=1.5888;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:16:0.93:0,1,2	1/1:5,0:4:2.85:35,3,0	./.	0/0:18,0:1:3.01:0,3,46	0/1:17,0:16:0:0,0,0	0/0:22,0:21:39.13:0,39,640	0/0:33,0:31:57.19:0,57,928	0/1:27,0:22:89.50:89,0,241	0/0:11,0:11:2.03:0,2,6	0/1:12,0:10:57.51:58,0,81	0/1:9,0:8:26.68:27,0,42	0/0:26,0:26:60.99:0,61,951	0/0:21,0:21:51.16:0,51,850	0/0:18,0:18:45.12:0,45,693	0/0:19,0:19:2.60:0,3,10	1/1:6,4:10:6.12:42,6,0	0/1:18,0:17:26.62:27,0,44	0/1:9,0:7:33.11:33,0,65	0/1:9,0:5:62.83:63,0,70	1/1:11,0:9:1.18:102,1,0	0/1:27,0:23:29.06:222,0,29	0/0:13,0:13:14.78:0,15,259	0/0:18,0:17:48.16:0,48,805	0/0:42,0:41:95.78:0,96,1486	0/1:6,0:5:67.28:67,0,84	0/1:26,0:23:44.91:323,0,45	0/1:14,0:15:2.10:2,0,54	0/1:5,0:5:23.59:105,0,24
chr10	57725812	.	CAG	C	1190.41	PASS	AB=0.889;AC=11;AF=0.212;AN=52;BaseQRankSum=6.383;DP=496;FS=23.691;HRun=0;HaplotypeScore=103.8241;InbreedingCoeff=-0.2883;MQ=46.60;MQ0=26;MQRankSum=-5.718;QD=6.33;ReadPosRankSum=3.479;VQSLOD=1.6453;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:14,6:18:9.02:0,9,143	0/0:4,1:4:5.04:0,5,42	./.	./.	0/0:16,2:17:12.02:0,12,164	0/0:22,0:21:36.10:0,36,564	0/0:32,0:30:55.22:0,55,974	0/1:14,14:25:99:445,0,179	0/1:16,0:16:17.85:18,0,263	0/1:16,0:13:96.72:149,0,97	0/0:8,1:8:11.93:0,12,134	0/0:27,0:27:60.20:0,60,989	0/0:21,0:21:54.18:0,54,898	0/0:21,0:21:54.15:0,54,860	0/1:18,1:18:24.49:24,0,153	0/1:7,4:11:39.79:70,0,40	0/1:10,2:11:97.09:97,0,99	0/1:9,2:9:51.24:51,0,122	0/1:11,0:6:39.62:40,0,73	0/1:14,2:13:16.38:16,0,219	0/0:22,7:26:26.91:0,27,279	0/0:15,0:15:17.79:0,18,306	0/0:19,0:18:45.12:0,45,702	0/0:41,0:41:95.93:0,96,1530	0/0:9,0:8:14.25:0,14,124	0/1:27,2:27:99:319,0,230	0/1:17,2:19:99:103,0,107	0/0:5,0:4:6.75:0,7,23
chr10	57725852	.	CAGAG	C	1122.96	PASS	AB=0.615;AC=7;AF=0.135;AN=52;BaseQRankSum=5.280;DP=524;FS=4.176;HRun=0;HaplotypeScore=104.3773;InbreedingCoeff=0.7824;MQ=42.62;MQ0=64;MQRankSum=0.317;QD=14.21;ReadPosRankSum=0.875;VQSLOD=2.8375;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:11,17:21:21.42:370,21,0	0/0:3,0:3:9.03:0,9,237	./.	./.	1/1:6,17:23:18.01:331,18,0	0/0:19,0:16:33.10:0,33,729	0/0:33,0:29:40.54:0,41,1112	0/0:17,0:10:29.96:0,30,350	0/0:19,0:18:33.03:0,33,869	0/0:13,0:9:27.06:0,27,609	0/0:12,0:10:15.02:0,15,395	0/0:26,0:22:36.10:0,36,894	0/0:23,0:20:42.12:0,42,944	0/0:27,0:24:57.09:0,57,1392	0/0:24,0:23:27.09:0,27,712	1/1:6,14:18:23.90:364,24,0	0/0:15,0:13:26.87:0,27,710	0/1:3,5:7:29.79:203,0,30	0/0:15,0:9:24.94:0,25,432	0/0:17,0:14:30.10:0,30,788	0/0:27,0:22:45.13:0,45,1109	0/0:14,0:10:24.08:0,24,599	0/0:12,0:6:12.02:0,12,316	0/0:42,0:37:84.25:0,84,2113	0/0:13,0:12:21.88:0,22,626	0/0:24,0:21:56.84:0,57,1192	0/0:19,0:18:21.06:0,21,498	0/0:4,0:3:9.03:0,9,235
chr10	57726156	.	GGAGAGAGAGA	G	722.18	PASS	AB=0.973;AC=21;AF=0.553;AN=38;BaseQRankSum=2.564;DP=312;FS=0.000;HRun=0;HaplotypeScore=76.7402;InbreedingCoeff=0.2765;MQ=33.18;MQ0=97;MQRankSum=-1.387;QD=4.69;ReadPosRankSum=0.893;VQSLOD=1.4117;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,1:8:6.01:114,6,0	./.	./.	./.	0/1:8,0:7:0:0,0,0	0/0:7,0:5:6.02:0,6,203	0/0:12,0:8:12.04:0,12,435	./.	./.	1/1:6,3:8:2.41:99,2,0	0/1:11,2:13:30.23:61,0,30	0/0:7,0:7:9.03:0,9,279	0/0:12,0:10:6.02:0,6,135	./.	1/1:17,0:13:3.01:30,3,0	0/0:11,0:11:2.60:0,3,10	./.	0/1:13,0:11:2.47:2,0,4	0/1:17,0:7:59.27:74,0,59	1/1:7,0:6:3.01:57,3,0	1/1:15,0:14:3.01:88,3,0	0/1:15,0:13:0:0,0,0	./.	0/0:10,0:10:3.01:0,3,121	1/1:5,1:5:3.01:89,3,0	1/1:10,1:8:3.01:89,3,0	1/1:12,0:10:6.02:140,6,0	./.
chr10	57728176	.	A	AGAG	2865.26	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=1.551;DP=600;FS=1.778;HRun=0;HaplotypeScore=96.3324;InbreedingCoeff=0.9707;MQ=58.51;MQ0=26;MQRankSum=2.480;QD=28.37;ReadPosRankSum=1.109;VQSLOD=4.0131;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:27,12:39:46.67:1005,47,0	0/0:11,0:11:24.08:0,24,346	0/0:35,0:17:22.43:0,22,303	0/0:26,0:13:12.54:0,13,178	1/1:11,9:19:36.07:658,36,0	0/0:22,0:21:45.15:0,45,649	0/0:26,0:23:51.15:0,51,697	0/0:22,0:21:36.02:0,36,446	0/0:21,0:20:22.10:0,22,484	0/0:19,0:17:45.57:0,46,600	0/0:4,0:3:9.03:0,9,117	0/0:18,0:17:42.11:0,42,554	0/0:22,0:21:42.10:0,42,551	0/0:16,0:16:33.07:0,33,421	0/0:15,0:13:33.10:0,33,453	1/1:11,6:17:27.06:470,27,0	0/0:32,0:30:72.20:0,72,971	1/1:14,11:24:48.13:892,48,0	0/0:23,0:17:39.06:0,39,520	0/0:25,0:23:54.07:0,54,665	0/0:31,0:31:66.18:0,66,912	0/0:18,0:17:39.04:0,39,496	0/0:24,0:22:48.08:0,48,647	0/0:32,0:31:78.16:0,78,1001	0/0:15,0:13:30.09:0,30,405	0/0:17,0:16:30.09:0,30,409	0/0:14,0:14:24.08:0,24,346	0/0:10,0:9:18.03:0,18,237
chr10	57728230	.	GGAGGAA	G	1103.52	PASS	AB=0.983;AC=23;AF=0.426;AN=54;BaseQRankSum=3.010;DP=477;FS=0.000;HRun=0;HaplotypeScore=111.1228;InbreedingCoeff=0.0293;MQ=49.64;MQ0=36;MQRankSum=-2.645;QD=3.93;ReadPosRankSum=-1.856;VQSLOD=1.9354;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:35,2:36:27.24:27,0,165	0/1:12,0:10:63.96:64,0,86	./.	0/0:12,0:5:6.01:0,6,64	0/1:18,2:20:61.43:61,0,137	0/0:23,0:21:48.11:0,48,1138	0/0:26,0:22:45.10:0,45,1001	0/1:17,0:12:20.72:81,0,21	1/1:12,0:9:13.45:94,13,0	0/1:10,0:7:24.93:25,0,72	0/1:5,0:4:0:0,0,0	0/0:20,0:20:51.15:0,51,1271	0/0:17,0:16:39.11:0,39,1030	0/0:14,0:13:36.11:0,36,972	1/1:6,0:5:6.89:56,7,0	1/1:17,2:19:41.95:258,42,0	0/1:29,0:27:42.03:42,0,689	0/1:23,2:23:44.56:45,0,48	0/1:18,0:12:31.22:95,0,31	0/1:12,0:10:30.44:61,0,30	0/1:28,0:27:99:143,0,243	0/0:22,0:22:57.09:0,57,1333	0/0:14,0:14:30.03:0,30,604	0/0:45,0:43:99:0,123,3323	1/1:9,0:8:8.89:63,9,0	0/1:7,0:5:19.76:20,0,68	0/1:6,0:6:9.64:62,0,10	1/1:9,0:5:11.88:82,12,0
chr10	57728239	.	GGAA	G	3758.47	PASS	AB=0.926;AC=25;AF=0.463;AN=54;BaseQRankSum=7.324;DP=458;FS=0.412;HRun=0;HaplotypeScore=76.8694;InbreedingCoeff=0.1990;MQ=49.68;MQ0=31;MQRankSum=-0.745;QD=14.35;ReadPosRankSum=-4.471;VQSLOD=2.5377;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:10,25:34:1.36:795,0,1	0/1:10,0:9:56.78:64,0,57	./.	0/0:11,0:5:9.01:0,9,117	0/1:7,14:21:17.55:552,0,18	0/0:22,0:20:51.10:0,51,999	0/0:26,0:22:54.14:0,54,1106	0/1:16,0:11:62.88:88,0,63	1/1:11,0:8:17.80:127,18,0	0/1:7,0:4:54.03:73,0,54	1/1:4,0:4:3.42:28,3,0	0/0:19,0:19:54.15:0,54,1081	0/0:16,0:15:39.11:0,39,804	0/0:16,0:15:42.12:0,42,871	1/1:3,0:3:9:81,9,0	1/1:3,16:19:51.01:680,51,0	0/1:27,0:26:54.88:55,0,430	1/1:10,16:24:39.01:500,39,0	0/1:12,0:10:0.99:136,0,1	0/1:9,0:7:55.26:83,0,55	0/1:31,0:28:75.45:223,0,75	0/0:23,0:23:60.14:0,60,1199	0/0:12,0:12:30.03:0,30,513	0/0:47,0:45:99:0,130,2703	1/1:9,0:7:11.83:81,12,0	0/1:6,0:4:25.40:43,0,25	0/1:6,0:6:19.17:70,0,19	1/1:10,0:6:11.88:82,12,0
chr10	57728352	.	A	AGT	1016.93	PASS	AB=0.854;AC=15;AF=0.288;AN=52;BaseQRankSum=-3.855;DP=510;FS=0.807;HRun=0;HaplotypeScore=88.9573;InbreedingCoeff=-0.0781;MQ=54.49;MQ0=23;MQRankSum=0.440;QD=4.04;ReadPosRankSum=0.305;VQSLOD=1.8409;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:26:9.02:0,9,97	0/0:5,0:9:8.18:0,8,37	./.	./.	0/1:29,0:29:26.61:27,0,281	0/0:17,0:16:8.05:0,8,70	0/0:18,0:17:20.85:0,21,196	0/1:17,0:14:5.93:6,0,9	0/0:7,1:8:3.01:0,3,32	0/1:18,6:23:14.36:199,0,14	0/1:17,2:18:26.39:38,0,26	0/0:23,0:24:20.95:0,21,207	0/0:17,0:17:12.03:0,12,124	0/0:13,0:14:9.02:0,9,97	1/1:8,3:11:3.01:33,3,0	0/0:5,0:9:5.44:0,5,24	0/0:11,0:26:28.41:0,28,139	0/0:11,0:17:17.04:0,17,84	0/1:18,2:19:5.20:51,0,5	0/1:11,5:16:20.37:80,0,20	0/1:12,2:16:23.39:62,0,23	0/1:17,6:23:46.25:116,0,46	0/0:11,0:10:15.04:0,15,162	0/0:26,0:25:35.91:0,36,362	1/1:13,8:21:18.06:267,18,0	0/1:20,0:19:22.61:23,0,25	0/1:12,3:16:87.25:151,0,87	0/1:7,7:15:48.32:118,0,48
chr10	57728939	.	TAAAC	T	2113.61	PASS	AB=0.767;AC=6;AF=0.107;AN=56;BaseQRankSum=9.677;DP=695;FS=0.557;HRun=0;HaplotypeScore=108.0623;InbreedingCoeff=0.6082;MQ=57.28;MQ0=3;MQRankSum=-0.644;QD=23.23;ReadPosRankSum=1.103;VQSLOD=3.5808;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,23:29:54.18:872,54,0	0/0:20,0:20:36.12:0,36,868	0/0:26,0:14:14.98:0,15,280	0/0:20,0:15:9.03:0,9,217	1/1:6,23:29:60.05:906,60,0	0/0:30,1:31:29.80:0,30,1681	0/1:15,1:16:21.35:21,0,549	0/0:29,0:29:45.13:0,45,928	0/0:31,0:31:66.22:0,66,1524	0/0:31,0:31:69.19:0,69,1611	0/0:25,0:25:51.17:0,51,1151	0/0:27,0:27:60.21:0,60,1398	0/0:14,0:14:27.09:0,27,624	0/0:25,0:25:60.20:0,60,1419	0/0:26,0:26:51.16:0,51,1121	0/1:5,11:16:39.25:451,0,39	0/0:30,0:30:57.11:0,57,1288	0/0:17,0:17:36.04:0,36,784	0/0:21,0:19:27.09:0,27,614	0/0:34,0:34:69.10:0,69,1497	0/0:31,0:31:69.13:0,69,1552	0/0:26,0:26:62.79:0,63,1310	0/0:22,0:22:57.16:0,57,1222	0/0:21,0:21:36.12:0,36,820	0/0:24,0:24:57.20:0,57,1373	0/0:34,0:34:84.12:0,84,1876	0/0:27,0:27:29.18:0,29,932	0/0:12,0:12:30.07:0,30,624
chr10	57729596	.	AACACACACACACAC	A	224.42	PASS	AB=0.896;AC=12;AF=0.261;AN=46;BaseQRankSum=-0.979;DP=462;FS=12.622;HRun=0;HaplotypeScore=158.6413;InbreedingCoeff=0.3677;MQ=67.50;MQ0=17;MQRankSum=1.411;QD=1.80;ReadPosRankSum=1.627;VQSLOD=2.4105;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:24.07:0,24,645	./.	./.	0/0:36,0:28:0.47:0,0,1	0/0:14,0:14:9:0,9,182	0/0:17,0:16:12.51:0,13,551	0/0:27,0:25:11.96:0,12,150	0/0:20,0:20:4.05:0,4,9	0/1:12,3:15:0:0,0,0	0/1:18,0:18:17.43:48,0,17	1/1:8,0:7:2.97:20,3,0	0/0:15,0:15:6.02:0,6,348	0/0:16,0:16:12.04:0,12,453	0/0:13,0:13:9.03:0,9,457	./.	0/0:12,0:12:5.99:0,6,48	0/0:12,0:11:8.96:0,9,70	1/1:12,5:17:0.81:112,1,0	0/0:13,0:13:0:0,0,0	1/1:12,0:12:5.98:79,6,0	0/1:34,0:30:10.42:59,0,10	0/0:13,0:13:12.04:0,12,482	0/0:13,0:12:3.01:0,3,97	0/0:27,0:26:45.14:0,45,1936	0/1:6,0:8:0:0,0,0	1/1:12,0:12:1.17:25,1,0	./.	./.
chr10	57730178	.	AT	A	5098.30	PASS	AB=0.529;AC=31;AF=0.554;AN=56;BaseQRankSum=10.120;DP=385;FS=0.882;HRun=10;HaplotypeScore=40.3466;InbreedingCoeff=0.8623;MQ=69.19;MQ0=0;MQRankSum=-0.849;QD=21.24;ReadPosRankSum=1.859;VQSLOD=5.4686;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:75.16:0,75,816	1/1:0,7:7:21:182,21,0	0/0:8,0:7:2.65:0,3,181	0/0:5,0:5:2.92:0,3,17	0/0:15,0:15:42.11:0,42,464	0/0:20,0:20:57.15:0,57,630	0/0:10,0:11:29.91:0,30,313	1/1:2,14:16:41.99:365,42,0	1/1:2,13:15:38.99:339,39,0	1/1:3,8:11:26.99:234,27,0	1/1:3,13:16:35.98:313,36,0	0/0:15,0:15:45.12:0,45,498	0/0:9,0:9:18.05:0,18,199	0/0:10,1:11:4.02:0,4,271	1/1:0,17:17:50.99:443,51,0	1/1:0,15:15:41.99:365,42,0	1/1:1,18:19:53.99:469,54,0	1/1:1,8:9:20.99:182,21,0	1/1:9,16:25:47.97:417,48,0	1/1:2,9:11:23.99:208,24,0	1/1:2,15:17:41.99:365,42,0	0/0:4,0:4:12.03:0,12,133	0/0:8,0:8:21.05:0,21,225	0/0:13,0:13:36.10:0,36,398	1/1:0,10:10:26.99:234,27,0	1/1:8,19:27:59.95:516,60,0	1/1:2,14:16:32.99:287,33,0	0/1:1,8:9:6.18:181,0,6
chr10	57730337	.	AAAAC	A	5720.59	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=8.005;DP=297;FS=18.621;HRun=0;HaplotypeScore=54.2476;InbreedingCoeff=0.9443;MQ=80.07;MQ0=1;MQRankSum=-4.203;QD=34.05;ReadPosRankSum=0.802;VQSLOD=2.7717;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:57.20:0,57,1399	1/1:0,4:4:9.03:157,9,0	0/0:13,0:13:24.08:0,24,534	0/0:13,0:13:24.08:0,24,528	0/0:9,0:9:24.07:0,24,556	0/0:11,0:11:21.04:0,21,477	0/0:7,0:7:18.06:0,18,456	1/1:4,18:22:54.12:815,54,0	1/1:2,9:10:24.08:417,24,0	1/1:1,8:9:24.08:405,24,0	1/1:2,7:9:20.99:301,21,0	0/0:7,0:7:21.07:0,21,532	0/0:5,0:5:12.04:0,12,304	0/0:3,0:3:9.03:0,9,228	1/1:0,8:8:23.99:335,24,0	0/0:10,0:10:24.08:0,24,577	1/1:9,25:34:27.73:919,28,0	0/0:7,0:7:18.06:0,18,439	1/1:3,10:13:27.07:392,27,0	1/1:2,4:6:12.04:209,12,0	1/1:0,6:6:6.02:104,6,0	0/0:6,0:6:18.06:0,18,456	0/0:7,0:7:12.04:0,12,273	0/0:6,0:6:12.04:0,12,304	1/1:1,9:10:27.09:451,27,0	1/1:4,9:13:27.09:434,27,0	1/1:3,14:16:27.09:469,27,0	1/1:0,6:6:18.06:313,18,0
chr10	57730396	.	T	TTA	435.02	PASS	AC=6;AF=0.125;AN=48;BaseQRankSum=-4.092;DP=186;FS=2.816;HRun=0;HaplotypeScore=31.5063;InbreedingCoeff=0.5591;MQ=77.44;MQ0=2;MQRankSum=-1.773;QD=19.77;ReadPosRankSum=2.453;VQSLOD=3.0953;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,7:11:15.05:253,15,0	0/0:1,0:1:3.01:0,3,39	0/0:8,0:4:2.92:0,3,17	0/0:17,0:10:6.80:0,7,70	./.	0/0:10,0:10:30.08:0,30,372	0/0:1,0:1:3:0,3,26	0/0:37,0:37:84.25:0,84,1045	0/0:5,0:4:9.03:0,9,116	0/0:3,0:3:9.03:0,9,116	0/0:2,0:2:3:0,3,27	0/0:5,0:5:15.04:0,15,178	0/0:3,0:3:9.03:0,9,116	0/0:5,0:5:15.05:0,15,193	0/0:4,0:4:12.04:0,12,154	1/1:1,2:3:3.01:51,3,0	0/0:22,0:21:51.13:0,51,625	1/1:2,6:8:15.05:253,15,0	0/0:4,0:4:6.02:0,6,77	0/0:3,0:3:9:0,9,99	0/0:3,0:3:6.02:0,6,77	./.	./.	./.	0/0:9,0:9:21.07:0,21,270	0/0:6,0:6:18.06:0,18,231	0/0:6,0:6:9.03:0,9,116	0/0:9,0:9:18.06:0,18,232
chr10	57730688	.	AATAT	A	1325.13	PASS	AB=0.667;AC=23;AF=0.479;AN=48;BaseQRankSum=1.724;DP=243;FS=0.000;HRun=0;HaplotypeScore=46.7645;InbreedingCoeff=0.6406;MQ=61.24;MQ0=6;MQRankSum=-2.198;QD=13.25;ReadPosRankSum=0.944;VQSLOD=2.6791;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:17:15.05:0,15,285	./.	1/1:14,0:4:0.47:1,0,0	0/0:23,0:8:1.36:0,1,4	./.	0/0:12,0:16:32.32:0,32,592	0/0:5,1:6:9.03:0,9,221	0/0:29,0:39:41.88:0,42,781	1/1:1,0:3:3:28,3,0	1/1:1,4:6:12.02:153,12,0	1/1:1,1:2:3.01:50,3,0	0/0:2,0:2:3.01:0,3,74	0/0:4,0:4:9.03:0,9,217	0/0:7,0:7:9.03:0,9,221	1/1:7,4:10:6.02:99,6,0	./.	0/0:10,0:16:36.12:0,36,757	0/0:5,0:5:9.03:0,9,210	1/1:5,5:10:12.04:199,12,0	1/1:2,2:4:5.71:32,6,0	0/1:2,1:4:6.69:44,0,7	./.	0/0:1,0:1:3.01:0,3,73	0/0:1,0:1:3.01:0,3,74	1/1:3,0:14:11.85:112,12,0	1/1:5,6:12:21.05:302,21,0	1/1:2,5:11:21.01:275,21,0	1/1:4,5:9:12.04:199,12,0
chr10	57730785	.	ATCTCTC	A	3130.61	PASS	AB=0.865;AC=37;AF=0.841;AN=44;BaseQRankSum=0.815;DP=404;FS=2.148;HRun=0;HaplotypeScore=95.9005;InbreedingCoeff=0.2370;MQ=72.34;MQ0=20;MQRankSum=3.207;QD=11.10;ReadPosRankSum=3.121;VQSLOD=2.3681;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:21:15.05:273,15,0	./.	0/1:58,0:28:23.83:24,0,84	0/0:66,0:23:12.03:0,12,240	1/1:5,0:9:3.01:53,3,0	1/1:16,0:16:4.89:207,5,0	1/1:7,0:11:0.89:2,1,0	0/1:14,0:22:65.84:80,0,66	./.	1/1:4,7:10:21.06:367,21,0	./.	1/1:8,0:8:14.87:118,15,0	1/1:11,0:11:10.76:139,11,0	1/1:6,0:6:7.79:126,8,0	./.	./.	1/1:3,0:8:6.02:89,6,0	0/1:9,0:9:53.60:103,0,54	1/1:12,0:13:18.06:331,18,0	./.	1/1:11,0:11:15.01:268,15,0	1/1:6,0:6:3.01:36,3,0	0/0:3,0:10:3.94:0,4,26	1/1:7,0:7:13.69:127,14,0	1/1:12,0:12:9.03:157,9,0	1/1:2,9:10:27.07:516,27,0	1/1:6,0:15:3.01:51,3,0	1/1:7,0:7:9.03:188,9,0
chr10	57730843	.	GACACACAC	G	957.59	PASS	AB=0.952;AC=23;AF=0.479;AN=48;BaseQRankSum=0.433;DP=422;FS=3.228;HRun=0;HaplotypeScore=114.6879;InbreedingCoeff=0.4483;MQ=39.77;MQ0=56;MQRankSum=0.576;QD=4.39;ReadPosRankSum=-0.036;VQSLOD=1.6992;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:32,0:30:4.73:23,5,0	0/0:3,0:3:2.35:0,2,90	./.	./.	./.	0/0:17,0:16:15.92:0,16,331	0/0:25,0:16:9.90:0,10,42	0/0:33,0:27:14.83:0,15,99	1/1:8,0:5:3.01:48,3,0	0/0:18,0:12:1.55:0,2,4	1/1:11,1:8:3.10:9,3,0	0/0:10,0:8:6:0,6,71	0/0:14,0:12:15.52:0,16,314	0/1:16,0:14:9.67:10,0,41	0/0:13,3:13:0.21:0,0,0	0/0:11,0:11:0.94:0,1,2	0/1:12,0:11:3.34:3,0,43	0/1:12,0:9:47.25:47,0,60	1/1:7,4:10:15.04:239,15,0	1/1:20,0:19:15.02:211,15,0	1/1:37,0:29:15.03:205,15,0	0/0:9,0:8:2.55:0,3,18	./.	0/0:21,0:18:11.92:0,12,400	1/1:11,2:10:2.63:17,3,0	1/1:16,1:13:5.26:127,5,0	1/1:10,0:10:5.58:72,6,0	1/1:12,0:11:9.33:102,9,0
chr10	57731913	.	CTGTCTGTCTGTT	C	3671.97	PASS	AB=0.824;AC=28;AF=0.500;AN=56;BaseQRankSum=-0.474;DP=639;FS=11.930;HRun=0;HaplotypeScore=213.2016;InbreedingCoeff=0.7442;MQ=56.90;MQ0=18;MQRankSum=-1.045;QD=11.85;ReadPosRankSum=1.157;VQSLOD=1.4395;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:36:75.28:0,75,1430	0/1:5,6:11:70.23:163,0,70	0/0:38,0:21:29.93:0,30,385	0/0:24,0:8:15.02:0,15,206	0/0:27,0:27:54.22:0,54,1067	0/0:21,0:21:53.80:0,54,1179	0/0:34,0:33:77.67:0,78,1704	1/1:41,0:40:32.07:373,32,0	1/1:5,15:20:12.04:430,12,0	1/1:7,18:25:44.87:651,45,0	1/1:3,17:20:5.89:216,6,0	0/0:15,0:15:35.75:0,36,572	0/0:17,0:17:44.69:0,45,969	0/0:21,0:21:50.84:0,51,1440	1/1:1,13:14:3.01:108,3,0	0/1:38,0:38:92.24:92,0,575	1/1:19,0:19:7.85:31,8,0	0/0:11,0:11:33.10:0,33,1006	1/1:12,0:12:14.92:131,15,0	1/1:5,19:24:9.03:249,9,0	1/1:21,0:21:35.57:407,36,0	0/0:22,0:22:55.77:0,56,1429	0/0:29,0:29:71.95:0,72,2216	0/0:33,0:33:63.38:0,63,2088	1/1:1,25:26:8.66:232,9,0	1/1:11,0:10:23.93:267,24,0	1/1:6,17:23:6.02:215,6,0	1/1:0,5:5:3.01:108,3,0
chr10	57731917	.	CTGTCTGTT	C	3145.14	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=0.770;DP=628;FS=27.342;HRun=0;HaplotypeScore=177.3282;InbreedingCoeff=0.8178;MQ=51.23;MQ0=22;MQRankSum=-1.570;QD=10.31;ReadPosRankSum=-0.550;VQSLOD=1.2053;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:34:75.15:0,75,993	1/1:10,0:10:17.96:181,18,0	0/0:36,0:16:29.89:0,30,327	0/0:24,0:7:15.02:0,15,189	0/0:27,0:27:50.58:0,51,700	0/0:22,0:22:56.76:0,57,884	0/0:35,0:34:83.94:0,84,1318	1/1:25,11:35:65.28:549,65,0	1/1:18,0:18:12.04:243,12,0	1/1:24,0:24:44.87:441,45,0	1/1:19,0:19:5.62:122,6,0	0/0:15,0:15:35.75:0,36,470	0/0:17,0:17:44.66:0,45,755	0/0:21,0:21:50.84:0,51,1129	1/1:14,0:14:3.01:61,3,0	0/1:38,0:38:99:303,0,141	1/1:2,17:19:8.52:172,9,0	0/0:11,0:11:33.07:0,33,683	1/1:13,0:13:23.86:185,24,0	1/1:22,0:22:8.96:138,9,0	1/1:25,0:25:35.86:322,36,0	0/0:21,0:21:55.75:0,56,1045	0/0:29,0:29:77.89:0,78,1583	0/0:30,0:30:63.36:0,63,1563	1/1:26,0:26:8.61:138,9,0	1/1:16,0:15:41.75:323,42,0	1/1:20,0:20:6.02:121,6,0	1/1:5,0:5:3.01:61,3,0
chr10	57731945	.	CTG	C	790.96	PASS	AB=0.996;AC=14;AF=0.250;AN=56;BaseQRankSum=5.120;DP=570;FS=0.000;HRun=0;HaplotypeScore=191.0508;InbreedingCoeff=0.1415;MQ=42.87;MQ0=27;MQRankSum=-2.249;QD=3.04;ReadPosRankSum=1.307;VQSLOD=2.6205;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:34,0:33:28.11:122,0,28	0/1:10,0:10:2.99:3,0,112	0/0:22,0:5:12.04:0,12,162	0/0:20,0:4:9.03:0,9,126	0/1:33,1:33:49.58:105,0,50	0/0:18,0:18:33.07:0,33,544	0/0:30,0:29:37.19:0,37,748	0/1:30,0:29:2.22:2,0,606	0/1:19,0:19:6.11:9,0,6	0/1:20,0:20:62.66:63,0,367	0/0:24,0:24:9.13:0,9,93	0/0:10,0:10:15.05:0,15,282	0/0:14,0:14:21.07:0,21,404	0/0:22,0:22:39.13:0,39,750	0/0:16,0:16:1.55:0,2,4	1/1:0,31:31:39.13:583,39,0	0/0:15,0:15:4.33:0,4,59	0/0:10,0:10:18.71:0,19,148	0/0:10,0:10:26.93:0,27,315	0/1:29,0:28:4.12:4,0,120	0/1:14,0:14:23.61:24,0,37	0/0:20,0:20:42.14:0,42,794	0/0:31,0:31:72.23:0,72,1324	0/0:28,0:28:44.86:0,45,867	1/1:27,0:27:0.01:11,0,0	0/0:16,0:15:12.30:0,12,493	1/1:12,0:12:0.37:7,0,0	0/0:4,0:4:1.82:0,2,5
chr10	57731947	.	G	GTC	2156.09	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=0.084;DP=570;FS=4.748;HRun=0;HaplotypeScore=201.6858;InbreedingCoeff=0.4749;MQ=42.67;MQ0=27;MQRankSum=-0.146;QD=12.18;ReadPosRankSum=2.104;VQSLOD=3.2698;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,27:33:57.14:1001,57,0	0/0:8,0:8:5.30:0,5,142	0/0:18,0:3:6.02:0,6,82	0/0:20,0:4:6.02:0,6,86	1/1:8,29:36:35.25:655,35,0	0/0:18,0:18:24.08:0,24,343	0/1:29,0:28:11.35:11,0,474	0/0:30,0:29:49.37:0,49,638	0/0:18,0:18:10.58:0,11,99	0/1:22,0:22:12.55:13,0,332	0/0:23,0:23:11.89:0,12,147	0/0:10,0:10:14.98:0,15,189	0/0:14,0:14:21.07:0,21,299	0/0:22,0:22:39.13:0,39,557	0/0:16,0:16:3.01:0,3,31	1/1:32,0:32:33.56:200,34,0	0/0:14,0:14:11.98:0,12,123	1/1:2,7:9:24.08:430,24,0	0/0:10,0:10:23.40:0,23,274	0/0:31,0:30:12.92:0,13,163	0/1:14,0:14:9.71:10,0,26	0/0:20,0:20:42.12:0,42,582	0/0:32,0:32:69.23:0,69,986	0/0:28,0:28:3.46:0,3,593	0/0:27,0:27:4.74:0,5,36	0/0:16,0:15:38.96:0,39,520	0/0:13,0:13:1.84:0,2,29	0/0:4,0:4:3.01:0,3,32
chr10	57737794	.	CAAAAA	C	5345.09	PASS	AB=1.000;AC=29;AF=0.537;AN=54;BaseQRankSum=1.955;DP=447;FS=1.746;HRun=16;HaplotypeScore=105.0722;InbreedingCoeff=0.6767;MQ=37.92;MQ0=32;MQRankSum=-5.986;QD=19.44;ReadPosRankSum=1.858;VQSLOD=2.5785;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:18,0:16:58.69:59,0,88	1/1:4,9:13:27.02:420,27,0	./.	0/0:19,0:1:3.01:0,3,31	0/1:22,0:22:19.76:82,0,20	0/0:14,0:13:30.06:0,30,628	0/0:13,0:13:18.57:0,19,351	1/1:9,7:12:17.93:260,18,0	1/1:8,7:13:20.86:297,21,0	1/1:11,12:23:54.12:663,54,0	1/1:4,6:12:23.48:278,23,0	0/0:16,0:16:15.05:0,15,365	0/0:9,0:9:15.05:0,15,270	0/0:11,0:13:27.09:0,27,579	1/1:7,7:12:17.87:278,18,0	0/1:11,0:11:30.62:31,0,116	1/1:16,9:26:44.97:591,45,0	0/0:12,0:9:8.64:0,9,155	1/1:11,2:11:16.71:144,17,0	1/1:7,13:18:44.93:626,45,0	1/1:5,2:5:2.88:47,3,0	0/0:16,0:16:30.04:0,30,600	0/0:12,0:12:15.05:0,15,256	0/0:18,0:19:36.52:0,37,764	1/1:5,9:13:30.02:425,30,0	1/1:19,11:30:64.44:812,64,0	1/1:6,8:13:26.39:333,26,0	0/0:7,0:3:0:0,0,0
chr10	57737805	.	AAAAAAC	A	2055.52	PASS	AB=0.997;AC=21;AF=0.375;AN=56;BaseQRankSum=6.550;DP=501;FS=0.417;HRun=0;HaplotypeScore=135.9188;InbreedingCoeff=-0.0783;MQ=36.06;MQ0=37;MQRankSum=-7.354;QD=6.17;ReadPosRankSum=4.604;VQSLOD=2.0089;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:22,1:21:42.22:191,0,42	1/1:12,0:13:20.86:137,21,0	0/0:27,0:2:6.01:0,6,81	0/0:34,0:2:2.98:0,3,22	1/1:22,3:25:49.57:431,50,0	0/0:15,0:14:29.94:0,30,615	0/1:14,0:13:4.27:4,0,321	0/1:18,0:14:44.02:44,0,143	1/1:14,0:12:18.28:105,18,0	0/1:29,0:27:13.43:228,0,13	0/1:12,0:12:9.08:94,0,9	0/0:9,0:8:15.05:0,15,343	0/0:5,0:5:14.97:0,15,208	0/0:14,0:14:33.10:0,33,655	0/1:16,0:13:61.61:62,0,70	0/1:10,0:10:32.61:87,0,33	0/1:26,0:26:99:177,0,110	0/1:9,0:7:1.44:1,0,90	0/1:23,0:19:53.98:54,0,112	0/1:26,0:24:46.42:150,0,46	0/1:9,0:7:4.21:4,0,41	0/0:21,0:18:35.82:0,36,646	0/0:17,0:16:21.63:0,22,301	0/0:19,0:18:38.19:0,38,737	0/1:16,0:15:1.07:141,0,1	0/1:30,0:29:58.77:221,0,59	0/1:18,0:17:21.05:92,0,21	0/0:7,0:2:5.91:0,6,38
chr10	57737806	.	AAAAAC	A	3819.87	PASS	AB=1.000;AC=24;AF=0.429;AN=56;BaseQRankSum=5.362;DP=508;FS=6.712;HRun=0;HaplotypeScore=124.1575;InbreedingCoeff=0.0009;MQ=37.93;MQ0=37;MQRankSum=-6.881;QD=11.33;ReadPosRankSum=4.368;VQSLOD=2.0176;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:22,2:22:0.62:263,1,0	1/1:14,0:14:7.64:246,8,0	0/0:27,0:2:6.01:0,6,65	0/0:36,0:3:2.98:0,3,22	1/1:23,2:25:58.97:512,59,0	0/0:15,0:14:29.88:0,30,520	0/1:14,0:13:4.98:5,0,275	0/1:18,0:14:88.23:102,0,88	1/1:14,0:12:29.42:237,29,0	0/1:30,0:28:23.09:358,0,23	1/1:12,0:12:2.70:157,3,0	0/0:9,0:8:15.05:0,15,279	0/0:5,0:5:14.94:0,15,170	0/0:15,0:15:36.07:0,36,571	0/1:15,0:12:55.25:146,0,55	0/1:12,0:11:30.11:90,0,30	0/1:28,0:27:68.64:289,0,69	0/1:10,0:8:7.02:7,0,89	0/1:22,0:18:69.17:126,0,69	0/1:26,0:24:25.10:340,0,25	0/1:8,0:6:19.12:19,0,41	0/0:22,0:19:33.28:0,33,552	0/0:16,0:15:23.25:0,23,269	0/0:19,0:18:38.19:0,38,658	1/1:16,0:15:2.58:266,3,0	0/1:31,0:30:54.92:413,0,55	0/1:18,0:17:8.73:243,0,9	0/0:7,0:2:5.91:0,6,37
chr10	57737807	.	AAAAC	A	2612.10	PASS	AB=0.996;AC=23;AF=0.411;AN=56;BaseQRankSum=6.782;DP=512;FS=6.698;HRun=0;HaplotypeScore=121.8373;InbreedingCoeff=-0.0466;MQ=37.94;MQ0=39;MQRankSum=-8.318;QD=7.12;ReadPosRankSum=4.816;VQSLOD=1.8362;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:22,2:22:41.12:352,41,0	0/1:14,0:14:2.57:118,0,3	0/1:28,0:3:6.06:6,0,51	0/0:37,0:3:2.97:0,3,20	1/1:21,4:25:59.47:552,59,0	0/0:15,0:13:29.60:0,30,419	0/1:14,0:13:5.42:5,0,229	0/1:20,0:16:45.06:45,0,133	1/1:13,1:12:24.52:150,25,0	0/1:29,0:27:38.76:209,0,39	1/1:12,0:12:2.98:109,3,0	0/0:9,0:8:15.05:0,15,222	0/0:5,0:5:14.56:0,15,127	0/0:15,0:15:35.06:0,35,441	0/1:14,0:11:55.32:90,0,55	0/1:12,0:11:16.89:83,0,17	0/1:28,0:27:82.70:176,0,83	0/1:10,0:8:5.92:6,0,78	0/1:24,0:20:94.71:95,0,107	0/1:26,0:24:46.23:165,0,46	0/1:8,0:6:6.11:6,0,41	0/0:21,0:18:29.02:0,29,454	0/0:15,0:14:13.36:0,13,213	0/0:18,0:17:37.94:0,38,558	0/1:15,1:15:4.18:152,0,4	0/1:31,0:30:65.72:259,0,66	0/1:18,0:17:8.12:205,0,8	0/0:10,0:5:14.87:0,15,106
chr10	57737810	.	AC	A	1041.66	PASS	AB=0.973;AC=20;AF=0.357;AN=56;BaseQRankSum=0.746;DP=517;FS=6.384;HRun=1;HaplotypeScore=109.0920;InbreedingCoeff=-0.1524;MQ=38.78;MQ0=39;MQRankSum=-3.845;QD=3.19;ReadPosRankSum=-1.905;VQSLOD=-0.7215;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:23,1:22:50.86:340,51,0	0/0:15,1:16:6.01:0,6,102	0/1:28,3:5:13.98:24,0,14	0/0:37,1:3:2.22:0,2,7	1/1:23,0:23:59.07:380,59,0	0/1:15,0:13:29.49:29,0,124	0/1:12,0:11:0.60:1,0,98	0/0:22,0:18:4.24:0,4,187	0/1:14,0:12:6.98:7,0,15	0/1:32,0:29:10.87:11,0,153	0/1:12,0:12:11.01:11,0,49	0/0:10,0:9:2.35:0,2,68	0/1:5,1:6:32.21:32,0,36	0/0:14,0:14:10.88:0,11,130	0/0:16,0:13:16.45:0,16,136	1/1:10,0:9:2.25:87,2,0	0/1:27,0:26:44.66:45,0,132	0/1:8,0:8:20.36:20,0,24	0/1:24,0:20:2.75:3,0,177	0/0:24,0:22:18.96:0,19,146	0/0:8,0:6:9.53:0,10,54	0/1:19,2:18:52.84:53,0,153	0/1:14,1:14:63.02:63,0,94	0/0:17,0:17:35.71:0,36,275	0/0:15,0:14:0.82:0,1,74	0/1:33,0:32:62.13:62,0,198	0/1:18,0:17:30.82:31,0,46	0/0:10,0:6:17.85:0,18,128
chr10	57737839	.	AAAC	A	966.25	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=4.829;DP=517;FS=5.834;HRun=0;HaplotypeScore=146.1619;InbreedingCoeff=0.8870;MQ=47.55;MQ0=16;MQRankSum=-5.389;QD=14.87;ReadPosRankSum=-0.972;VQSLOD=3.1205;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:23:42.92:307,43,0	0/0:14,0:14:38.73:0,39,291	0/0:21,0:6:1.75:0,2,8	0/0:32,0:5:3:0,3,27	1/1:22,0:22:59.23:426,59,0	0/0:10,0:9:15.02:0,15,215	0/0:17,0:17:36.11:0,36,600	0/0:25,0:24:38.89:0,39,319	0/0:13,0:13:23.10:0,23,166	0/0:33,0:32:68.44:0,68,538	0/0:16,0:16:41.80:0,42,322	0/0:8,0:7:20.74:0,21,325	0/0:7,0:7:18.06:0,18,300	0/0:13,0:13:23.82:0,24,493	0/0:14,0:14:35.84:0,36,279	1/1:9,0:9:19.13:134,19,0	0/0:29,0:29:74.46:0,74,568	1/1:2,9:11:17.97:256,18,0	0/0:27,0:25:44.83:0,45,358	0/0:33,0:33:77.56:0,78,596	0/0:8,0:8:11.96:0,12,94	0/0:17,0:17:39.11:0,39,666	0/0:14,0:14:38.70:0,39,616	0/0:18,0:17:30.09:0,30,511	0/0:20,0:19:50.37:0,50,411	0/0:33,0:32:86.62:0,87,668	0/0:18,0:18:38.80:0,39,294	0/0:12,0:11:32.88:0,33,256
chr10	57737855	.	AACAAC	A	1549.75	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=3.252;DP=517;FS=3.529;HRun=0;HaplotypeScore=172.1490;InbreedingCoeff=0.9208;MQ=59.36;MQ0=6;MQRankSum=-4.497;QD=28.18;ReadPosRankSum=-1.549;VQSLOD=2.8608;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:22,1:22:52.75:578,53,0	0/0:16,0:16:44.43:0,44,672	0/0:22,0:13:5.08:0,5,119	0/0:26,0:9:6.86:0,7,67	1/1:21,2:23:68.34:807,68,0	0/0:8,0:8:18.03:0,18,364	0/0:18,0:18:44.18:0,44,1016	0/0:25,0:25:67.85:0,68,884	0/0:10,0:9:24.08:0,24,381	0/0:33,0:33:93.96:0,94,1325	0/0:18,0:18:47:0,47,715	0/0:8,0:8:24.02:0,24,545	0/0:8,0:8:20.10:0,20,423	0/0:15,0:15:44.92:0,45,907	0/0:15,0:15:44.42:0,44,666	1/1:6,3:9:23.17:306,23,0	0/0:29,0:29:86.50:0,87,1340	0/0:14,0:14:27.16:0,27,172	0/0:22,0:21:58.50:0,59,814	0/0:33,0:33:91.34:0,91,1365	0/0:11,0:11:24.69:0,25,255	0/0:14,0:14:42.12:0,42,1056	0/0:15,0:14:42.11:0,42,970	0/0:19,0:18:39.05:0,39,853	0/0:20,0:20:59.45:0,59,924	0/0:36,0:35:96.92:0,97,1544	0/0:15,0:15:44.50:0,44,670	0/0:11,0:11:33.11:0,33,550
chr10	57737856	.	ACAAC	A	2255.95	PASS	AB=0.979;AC=8;AF=0.143;AN=56;BaseQRankSum=1.183;DP=520;FS=3.973;HRun=0;HaplotypeScore=159.2871;InbreedingCoeff=0.7405;MQ=59.44;MQ0=6;MQRankSum=-5.504;QD=24.52;ReadPosRankSum=-1.412;VQSLOD=3.1122;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,7:21:57.08:857,57,0	0/0:16,0:16:42.50:0,42,628	0/1:21,0:13:11.19:11,0,100	0/0:28,0:8:5.78:0,6,82	1/1:13,9:23:69.22:1183,69,0	0/0:8,0:8:21.05:0,21,365	0/0:17,0:17:42.61:0,43,927	0/0:24,0:24:50.11:0,50,790	0/0:10,0:9:23.75:0,24,350	0/0:33,0:33:90.23:0,90,1234	0/0:18,0:18:47.23:0,47,698	0/0:8,0:8:24.04:0,24,493	0/0:8,0:8:18.53:0,19,374	0/0:16,0:16:45.83:0,46,825	0/0:15,0:15:42.45:0,42,607	1/1:7,2:9:23.95:351,24,0	0/0:29,0:29:85.03:0,85,1239	0/1:15,0:15:0.80:1,0,146	0/0:21,0:20:43.02:0,43,765	0/0:33,0:33:85.21:0,85,1252	0/0:11,0:11:20.73:0,21,229	0/0:16,0:16:48.14:0,48,995	0/0:16,0:15:45.14:0,45,918	0/0:18,0:17:38.72:0,39,803	0/0:19,0:20:57.52:0,58,850	0/0:36,0:35:93.28:0,93,1481	0/0:16,0:16:43.66:0,44,628	0/0:11,0:11:33.11:0,33,524
chr10	57737859	.	AC	A	1107	PASS	AB=0.995;AC=17;AF=0.304;AN=56;BaseQRankSum=8.496;DP=542;FS=5.462;HRun=1;HaplotypeScore=138.2176;InbreedingCoeff=0.3481;MQ=63.01;MQ0=7;MQRankSum=-9.383;QD=4.67;ReadPosRankSum=1.814;VQSLOD=0.6406;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:20,3:22:55.03:437,55,0	0/1:16,0:16:15.21:15,0,39	0/1:25,1:13:9.11:9,0,91	0/0:36,1:13:6.69:0,7,76	1/1:18,6:24:70.27:496,70,0	0/0:9,0:9:20.94:0,21,197	0/0:16,0:16:38.29:0,38,420	0/0:22,0:22:21.75:0,22,154	0/0:11,0:10:7:0,7,49	0/0:33,0:33:20.93:0,21,149	0/0:20,0:20:5.88:0,6,30	0/0:9,0:9:23.69:0,24,252	0/0:10,0:10:18.10:0,18,140	0/0:17,0:17:21.23:0,21,388	0/1:16,0:16:7.14:7,0,15	1/1:8,1:9:22.67:147,23,0	0/1:28,0:28:1.67:2,0,76	0/1:16,0:15:54.48:54,0,129	0/0:19,0:18:12.91:0,13,84	0/1:33,0:33:30.70:32,0,31	0/0:11,0:11:13.10:0,13,52	0/0:16,0:16:45.41:0,45,487	0/0:17,0:16:45.45:0,45,449	0/0:20,0:19:38.91:0,39,433	0/1:20,0:20:22.32:22,0,55	0/0:38,0:37:4.75:0,5,89	1/1:15,0:15:4.86:33,5,0	1/1:11,0:11:5.88:26,6,0
chr10	57737860	.	CA	C	5610.76	PASS	AB=0.921;AC=34;AF=0.607;AN=56;BaseQRankSum=5.391;DP=555;FS=0.400;HRun=12;HaplotypeScore=127.4110;InbreedingCoeff=0.7529;MQ=62.57;MQ0=7;MQRankSum=-1.327;QD=15.29;ReadPosRankSum=3.758;VQSLOD=4.3520;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:22:7.33:54,0,7	1/1:3,13:16:35.78:270,36,0	0/0:28,0:14:22.45:0,22,179	0/0:39,0:14:9.42:0,9,112	1/1:24,0:24:1.12:39,1,0	0/0:9,0:9:18.03:0,18,177	0/1:12,3:16:24.68:25,0,304	1/1:6,16:22:50.52:364,51,0	1/1:3,8:10:14.93:116,15,0	1/1:4,28:33:83.24:609,83,0	1/1:1,18:20:47.72:359,48,0	0/0:9,0:9:23.96:0,24,221	0/0:8,1:10:0.70:0,1,152	0/0:18,0:18:45.40:0,45,412	1/1:2,14:16:41.76:317,42,0	1/1:9,0:9:1.96:22,2,0	1/1:5,23:28:68.63:525,69,0	0/0:17,0:16:28.31:0,28,214	1/1:7,10:19:41.75:316,42,0	1/1:2,31:33:92.38:689,92,0	1/1:1,10:11:23.72:165,24,0	0/0:16,1:17:24.82:0,25,418	0/0:14,1:16:18.67:0,19,349	0/0:21,0:22:32.54:0,33,423	1/1:4,16:20:50.71:385,51,0	1/1:3,33:37:99:781,104,0	1/1:0,15:15:41.71:320,42,0	1/1:0,11:11:32.87:255,33,0
chr10	57739657	.	CG	C	33.89	PASS	AC=2;AF=0.038;AN=52;BaseQRankSum=1.135;DP=448;FS=9.796;HRun=2;HaplotypeScore=54.5561;InbreedingCoeff=0.8900;MQ=49.34;MQ0=46;MQRankSum=0.643;QD=3.39;ReadPosRankSum=1.658;VQSLOD=-0.5548;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:23:45.03:0,45,624	0/0:6,0:5:12:0,12,152	./.	./.	0/0:17,0:17:39.11:0,39,536	0/0:12,0:12:33.10:0,33,471	0/0:21,0:16:39.08:0,39,513	0/0:21,0:20:57.14:0,57,781	0/0:16,0:15:36.11:0,36,513	0/0:14,0:13:39.13:0,39,580	0/0:18,0:16:39.12:0,39,554	0/0:11,0:10:24.07:0,24,339	0/0:11,0:11:30.10:0,30,423	0/0:8,0:6:15.52:0,16,219	0/0:16,0:15:39.13:0,39,564	0/0:21,0:21:57.19:0,57,853	0/0:27,0:23:60.20:0,60,883	1/1:4,6:7:9.03:117,9,0	0/0:14,0:13:39.10:0,39,547	0/0:16,0:16:45.14:0,45,639	0/0:19,0:18:44.98:0,45,604	0/0:11,0:11:27.09:0,27,396	0/0:17,0:16:42.13:0,42,601	0/0:17,0:16:39.09:0,39,548	0/0:10,0:8:24.08:0,24,357	0/0:23,0:21:63.21:0,63,932	0/0:24,0:24:60.18:0,60,842	0/0:17,0:17:45.10:0,45,628
chr10	57742731	.	T	TACAC	4069.23	PASS	AB=0.834;AC=30;AF=0.577;AN=52;BaseQRankSum=-1.056;DP=759;FS=10.527;HRun=0;HaplotypeScore=143.6044;InbreedingCoeff=0.6270;MQ=66.02;MQ0=17;MQRankSum=0.191;QD=8.94;ReadPosRankSum=-2.119;VQSLOD=2.2245;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:40,0:40:23.72:391,24,0	1/1:11,0:10:9.03:178,9,0	./.	./.	1/1:30,0:29:5.87:112,6,0	0/0:16,0:19:24.05:0,24,312	0/0:28,0:30:30.06:0,30,404	1/1:36,0:34:33.07:582,33,0	1/1:20,7:30:17.77:318,18,0	0/1:26,0:31:45.77:279,0,46	0/1:9,0:9:11.62:69,0,12	0/0:23,0:26:29.81:0,30,407	0/0:30,0:30:24.06:0,24,344	0/0:16,0:16:15.03:0,15,209	1/1:25,12:41:20.22:435,20,0	1/1:20,9:31:12.04:250,12,0	1/1:22,6:30:23.77:324,24,0	0/0:15,0:20:18.03:0,18,185	1/1:11,1:14:15.26:245,15,0	0/1:12,4:17:33.66:65,0,34	0/1:32,1:49:8.48:84,0,8	0/0:24,0:25:21.05:0,21,286	0/0:22,0:25:14.98:0,15,164	0/0:35,0:39:51.13:0,51,731	1/1:10,1:22:8.50:95,8,0	1/1:20,0:19:24.47:313,24,0	1/1:10,5:16:6.02:141,6,0	1/1:14,5:20:9.92:186,10,0
chr10	57744396	.	T	TA	1950.72	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=-5.898;DP=427;FS=1.001;HRun=10;HaplotypeScore=47.6345;InbreedingCoeff=0.7276;MQ=63.35;MQ0=10;MQRankSum=3.612;QD=21.20;ReadPosRankSum=0.123;VQSLOD=4.3277;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,24:31:80.55:832,81,0	0/0:5,0:6:17.02:0,17,129	0/0:9,0:7:2.85:0,3,74	0/1:8,0:4:14.38:14,0,22	1/1:6,18:25:65.78:658,66,0	0/0:20,0:20:47.91:0,48,387	0/0:14,0:14:14.88:0,15,271	0/0:32,0:22:59.93:0,60,493	0/0:18,0:19:46.98:0,47,375	0/0:12,0:12:32.95:0,33,271	0/0:11,0:11:32.96:0,33,271	0/0:12,0:12:26.93:0,27,222	0/0:13,0:13:35.95:0,36,294	0/0:9,0:9:23.92:0,24,192	0/0:15,0:15:38.95:0,39,320	1/1:0,9:9:21.05:224,21,0	0/0:22,0:22:53.92:0,54,440	1/1:4,14:18:36.09:384,36,0	0/0:17,0:17:41.94:0,42,342	0/0:12,1:13:0.98:0,1,214	0/0:15,1:16:9.95:0,10,286	0/0:4,0:4:11.99:0,12,99	0/0:9,0:9:20.96:0,21,172	0/0:12,0:12:5.96:0,6,189	0/0:21,0:21:54.80:0,55,441	0/0:21,0:21:56.91:0,57,468	0/0:23,0:23:62.90:0,63,514	0/0:5,0:5:8.90:0,9,62
chr10	57744495	.	GA	G	5696.70	PASS	AB=0.722;AC=36;AF=0.643;AN=56;BaseQRankSum=6.147;DP=490;FS=0.000;HRun=11;HaplotypeScore=52.3058;InbreedingCoeff=0.5189;MQ=63.23;MQ0=3;MQRankSum=0.232;QD=14.64;ReadPosRankSum=1.412;VQSLOD=4.9792;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,38:43:40.94:749,41,0	1/1:1,3:5:11.02:80,11,0	0/1:11,1:11:8.76:9,0,128	0/0:6,0:5:10.67:0,11,80	1/1:7,16:23:12.94:313,13,0	0/0:27,0:27:13.95:0,14,531	0/0:11,2:13:5.04:0,5,236	0/1:5,15:19:2.77:305,0,3	1/1:3,13:16:29.96:246,30,0	1/1:7,17:24:50.92:419,51,0	1/1:8,14:24:17.28:325,17,0	0/0:7,0:9:17.75:0,18,157	0/0:12,0:15:5.53:0,6,229	0/1:7,2:9:25.23:25,0,168	1/1:1,11:12:29.96:246,30,0	1/1:0,11:11:26.91:215,27,0	1/1:3,24:28:53.93:443,54,0	1/1:3,8:11:17.95:148,18,0	1/1:5,10:13:29.93:242,30,0	1/1:2,17:19:47.85:382,48,0	0/1:6,20:26:4.60:402,0,5	0/0:15,0:16:29.91:0,30,299	0/0:15,0:15:33.04:0,33,334	0/1:17,3:20:25.81:26,0,368	1/1:2,10:12:26.77:210,27,0	1/1:7,19:27:24.84:401,25,0	0/1:4,10:14:31:189,0,31	1/1:5,13:18:15.78:323,16,0
chr10	57748158	.	TGAG	T	19052.60	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=3.941;DP=748;FS=3.433;HRun=0;HaplotypeScore=128.6363;InbreedingCoeff=0.9999;MQ=78.46;MQ0=0;MQRankSum=-5.123;QD=49.88;ReadPosRankSum=2.705;VQSLOD=6.7162;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,108,2585	1/1:0,12:12:30.10:559,30,0	0/0:29,0:28:64.77:0,65,1642	0/0:29,0:28:61.91:0,62,1640	0/0:32,0:32:96.33:0,96,2336	0/0:27,0:27:81.26:0,81,1942	0/0:16,0:16:45.15:0,45,1106	1/1:0,25:25:75.26:1384,75,0	1/1:0,29:29:72.15:1237,72,0	1/1:0,34:34:96.30:1722,96,0	1/1:0,21:21:63.22:1141,63,0	0/0:26,0:26:78.27:0,78,1919	0/0:26,0:26:78.27:0,78,1903	0/0:15,0:15:45.15:0,45,1109	1/1:0,32:32:96.16:1638,96,0	0/0:26,0:26:78.27:0,78,1894	1/1:0,35:35:93.32:1731,93,0	0/0:25,0:25:69.22:0,69,1650	1/1:0,22:22:66.18:1147,66,0	1/1:0,32:32:90.21:1561,90,0	1/1:0,23:23:51.04:827,51,0	0/0:21,0:21:63.22:0,63,1543	0/0:23,0:23:69.22:0,69,1634	0/0:35,0:35:99:0,105,2543	1/1:0,22:22:60.16:1083,60,0	1/1:0,31:31:93.32:1734,93,0	1/1:0,35:35:99:1666,99,0	1/1:1,28:29:87.30:1622,87,0
chr10	57751010	.	A	AT	1810.01	PASS	AB=0.758;AC=7;AF=0.125;AN=56;BaseQRankSum=-6.931;DP=698;FS=3.147;HRun=11;HaplotypeScore=74.4403;InbreedingCoeff=0.3375;MQ=65.30;MQ0=0;MQRankSum=-1.391;QD=11.31;ReadPosRankSum=0.999;VQSLOD=3.4578;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:17,17:36:6.33:509,0,6	0/0:13,0:14:34.90:0,35,261	0/1:9,0:9:23.96:24,0,42	0/0:16,0:13:17.89:0,18,136	0/1:16,23:41:26.65:580,0,27	0/0:26,1:27:38.28:0,38,480	0/0:16,1:17:14.38:0,14,295	0/0:37,0:40:44.37:0,44,487	0/1:27,3:31:19.72:20,0,398	0/0:36,1:38:46.24:0,46,533	0/0:25,0:25:50.72:0,51,392	0/0:26,0:27:49.77:0,50,377	0/0:30,2:32:50.22:0,50,571	0/0:26,0:27:55.76:0,56,421	0/0:33,0:33:77.65:0,78,604	0/1:9,21:30:0.58:540,0,1	0/0:26,0:27:73.65:0,74,551	1/1:2,10:12:27.05:274,27,0	0/0:17,1:18:20.38:0,20,340	0/0:31,0:32:76.68:0,77,583	0/0:25,0:27:66.75:0,67,493	0/0:17,0:17:35.80:0,36,279	0/0:19,0:21:39.88:0,40,290	0/0:7,0:7:17.92:0,18,139	0/0:24,1:25:29.30:0,29,410	0/0:26,1:29:39.35:0,39,467	0/0:22,0:24:42.88:0,43,313	0/0:15,0:15:26.82:0,27,209
chr10	57752777	.	A	AT	6294.24	PASS	AB=0.556;AC=26;AF=0.464;AN=56;BaseQRankSum=-12.380;DP=477;FS=8.766;HRun=9;HaplotypeScore=54.6725;InbreedingCoeff=0.8564;MQ=68.91;MQ0=1;MQRankSum=-2.385;QD=23.40;ReadPosRankSum=1.268;VQSLOD=5.5606;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:98.47:0,98,841	1/1:2,9:11:1.96:241,2,0	0/0:18,0:16:23.84:0,24,197	0/0:8,0:6:14.80:0,15,110	0/0:30,0:30:80.31:0,80,663	0/0:21,0:21:56.96:0,57,491	0/0:7,0:8:23.03:0,23,188	1/1:6,16:21:18.92:381,19,0	1/1:0,7:7:21.06:232,21,0	1/1:7,17:24:27.92:505,28,0	1/1:5,24:30:70.89:772,71,0	0/0:12,0:12:17.93:0,18,149	0/0:8,0:8:20.99:0,21,182	0/0:7,0:7:14.98:0,15,127	1/1:2,14:17:32.14:392,32,0	0/0:13,0:13:35.99:0,36,313	1/1:5,18:23:17.13:524,17,0	0/0:19,0:19:41.93:0,42,357	0/1:6,16:22:1:418,0,1	1/1:6,27:33:54.90:789,55,0	1/1:4,6:9:18.05:199,18,0	0/0:10,0:10:20.94:0,21,182	0/0:12,0:12:29.99:0,30,260	0/0:7,0:7:14.96:0,15,120	1/1:3,20:23:57.15:630,57,0	1/1:1,13:14:39.11:431,39,0	1/1:5,20:25:57.15:630,57,0	0/1:1,7:8:8.01:148,0,8
chr10	57752914	.	CCTCTGGAAGAGCTTT	C	13885.11	PASS	AB=0.692;AC=27;AF=0.482;AN=56;BaseQRankSum=14.635;DP=480;FS=0.000;HRun=0;HaplotypeScore=239.0383;InbreedingCoeff=0.8657;MQ=46.78;MQ0=13;MQRankSum=-13.514;QD=72.70;ReadPosRankSum=6.469;VQSLOD=3.9180;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:36:99:0,102,6985	1/1:3,2:5:6.02:271,6,0	0/0:20,0:8:24.08:0,24,1691	0/0:36,0:8:21.96:0,22,1374	0/0:16,0:15:45.15:0,45,3064	0/0:29,0:29:87.28:0,87,5691	0/0:23,0:23:63.13:0,63,4199	1/1:11,1:11:3.01:136,3,0	1/1:2,8:10:24.08:1083,24,0	1/1:6,14:20:42.14:1898,42,0	1/1:3,9:12:24.08:1078,24,0	0/0:25,0:23:69.24:0,69,4543	0/0:14,0:14:42.14:0,42,2752	0/0:11,0:11:33.11:0,33,1916	1/1:13,13:25:39.13:1760,39,0	0/0:12,0:12:36.12:0,36,2264	1/1:7,4:11:11.63:542,12,0	0/0:21,0:21:60.12:0,60,3934	1/1:5,3:8:9.03:409,9,0	1/1:6,19:25:51.18:2256,51,0	1/1:5,6:8:9:407,9,0	0/0:14,0:13:39.13:0,39,2744	0/0:13,0:13:36.12:0,36,2406	0/0:14,0:14:42.14:0,42,3003	1/1:2,6:8:18.06:812,18,0	0/1:10,8:18:85.76:1062,0,86	1/1:8,10:18:30.10:1356,30,0	1/1:1,6:7:18.06:816,18,0
chr10	57752933	.	TGCTCTTAACC	T	10058.07	PASS	AB=0.529;AC=27;AF=0.482;AN=56;BaseQRankSum=14.679;DP=397;FS=1.950;HRun=0;HaplotypeScore=188.6164;InbreedingCoeff=0.8827;MQ=51.42;MQ0=11;MQRankSum=-13.255;QD=87.46;ReadPosRankSum=7.055;VQSLOD=4.7945;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:33:99:0,99,4935	1/1:0,2:2:6.02:196,6,0	0/0:26,0:10:30.10:0,30,1317	0/0:41,0:14:39.13:0,39,1894	0/0:16,0:16:48.15:0,48,2291	0/0:24,0:24:66.23:0,66,3357	0/0:24,0:24:66.19:0,66,3476	1/1:0,3:3:9.02:174,9,0	0/1:1,8:9:99:753,0,132	1/1:0,14:14:42.14:1369,42,0	1/1:1,8:9:24.08:770,24,0	0/0:23,0:23:69.24:0,69,3323	0/0:13,0:13:39.13:0,39,2012	0/0:10,0:10:30.10:0,30,1546	1/1:0,13:13:39.13:1267,39,0	0/0:9,0:9:27.09:0,27,1279	1/1:0,4:4:12.04:391,12,0	0/0:22,0:22:60.21:0,60,3013	1/1:2,3:3:9.03:295,9,0	1/1:0,19:19:51.18:1613,51,0	1/1:1,6:5:9.03:294,9,0	0/0:13,0:13:39.13:0,39,2065	0/0:12,0:12:36.12:0,36,1820	0/0:15,0:15:45.15:0,45,2382	1/1:0,6:6:18.06:585,18,0	1/1:0,8:8:24.08:786,24,0	1/1:0,10:10:30.10:977,30,0	1/1:1,5:6:18.06:589,18,0
chr10	57752943	.	C	CAGT	5237.27	PASS	AB=1.000;AC=27;AF=0.482;AN=56;BaseQRankSum=15.994;DP=472;FS=0.367;HRun=0;HaplotypeScore=207.6321;InbreedingCoeff=0.9200;MQ=53.29;MQ0=9;MQRankSum=-14.218;QD=28.31;ReadPosRankSum=3.690;VQSLOD=4.7966;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:36:99:0,108,1964	1/1:6,0:6:17.40:316,17,0	0/0:25,0:11:33.07:0,33,496	0/0:38,0:19:34.16:0,34,739	0/0:16,0:16:45.15:0,45,830	0/0:21,0:21:60.19:0,60,1087	0/0:24,0:24:69.24:0,69,1255	1/1:7,0:7:17.78:309,18,0	0/1:13,0:13:19.44:316,0,19	1/1:22,0:22:60.64:664,61,0	1/1:13,1:15:34.95:491,35,0	0/0:21,0:21:63.22:0,63,1162	0/0:15,0:15:45.15:0,45,838	0/0:10,0:10:30.10:0,30,559	1/1:15,0:15:40.66:286,41,0	0/0:12,0:12:33.10:0,33,584	1/1:9,0:9:22.01:202,22,0	0/0:24,0:24:57.19:0,57,1013	1/1:9,2:9:26.30:451,26,0	1/1:26,0:26:57.59:585,58,0	1/1:11,0:9:11.24:110,11,0	0/0:15,0:15:42.14:0,42,783	0/0:12,0:12:36.12:0,36,671	0/0:16,0:16:45.15:0,45,838	1/1:11,0:11:28.19:371,28,0	1/1:14,0:14:39.94:475,40,0	1/1:17,0:17:45.03:520,45,0	1/1:8,0:8:19.28:142,19,0
chr10	57753944	.	TA	T	274.16	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.700;DP=530;FS=1.106;HRun=4;HaplotypeScore=67.8039;InbreedingCoeff=0.9853;MQ=70.92;MQ0=0;MQRankSum=-2.972;QD=17.14;ReadPosRankSum=0.351;VQSLOD=3.0438;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:93.25:0,93,1244	0/0:8,0:8:24.04:0,24,314	0/0:10,0:10:30.10:0,30,407	0/0:6,1:7:20.47:0,20,214	0/0:24,0:24:69.23:0,69,962	0/0:28,0:28:81.25:0,81,1099	0/0:21,0:21:63.19:0,63,848	0/0:26,0:26:72.22:0,72,963	0/0:12,0:12:33.11:0,33,460	0/0:20,0:20:60.20:0,60,840	0/0:33,0:33:96.32:0,96,1341	0/0:19,1:20:27.12:0,27,764	0/0:15,0:15:42.11:0,42,554	0/0:17,0:17:45.13:0,45,596	0/0:22,0:22:66.22:0,66,922	1/1:1,15:16:33.09:369,33,0	0/0:24,0:24:69.22:0,69,945	0/0:10,0:10:27.08:0,27,360	0/0:22,0:22:57.16:0,57,753	0/0:24,0:24:72.21:0,72,960	0/0:12,0:12:36.11:0,36,486	0/0:8,0:8:21.07:0,21,293	0/0:15,0:15:45.15:0,45,629	0/0:15,0:15:45.15:0,45,629	0/0:24,0:24:69.22:0,69,946	0/0:30,0:30:87.26:0,87,1168	0/0:26,0:26:75.25:0,75,1049	0/0:9,0:9:27.09:0,27,378
chr10	57754127	.	CCCCAAAACAAA	C	1422.16	PASS	AB=0.952;AC=3;AF=0.054;AN=56;BaseQRankSum=6.830;DP=656;FS=0.860;HRun=0;HaplotypeScore=194.2702;InbreedingCoeff=0.6319;MQ=71.93;MQ0=11;MQRankSum=-6.491;QD=33.07;ReadPosRankSum=1.473;VQSLOD=2.9296;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:72.03:0,72,3031	0/0:9,0:9:27.09:0,27,1362	0/0:67,0:35:71.52:0,72,2248	0/0:69,0:34:53.15:0,53,1236	0/0:25,0:25:75.24:0,75,3662	0/0:17,0:17:48.15:0,48,2160	0/0:23,0:23:69.19:0,69,3061	0/0:28,0:28:72.70:0,73,3072	0/0:12,0:12:36.12:0,36,1809	0/0:25,0:25:68.20:0,68,3024	0/0:23,0:23:69.20:0,69,3250	0/0:22,0:22:66.23:0,66,3296	0/0:19,0:19:54.14:0,54,2407	0/0:23,0:23:69.19:0,69,3167	0/1:19,1:20:46.43:46,0,2477	1/1:0,23:23:42.14:1482,42,0	0/0:30,0:30:83.25:0,83,3456	0/0:11,0:11:33.06:0,33,1331	0/0:15,0:15:42.13:0,42,1743	0/0:24,0:24:69.15:0,69,3023	0/0:27,0:27:78.24:0,78,3764	0/0:12,0:12:36.11:0,36,1754	0/0:10,0:10:30:0,30,1355	0/0:19,0:19:49.16:0,49,2518	0/0:18,0:18:51.18:0,51,2374	0/0:23,0:23:63.69:0,64,3246	0/0:31,0:31:90.28:0,90,4350	0/0:5,0:5:11.71:0,12,692
chr10	57755762	.	C	CTG	1584.61	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=1.088;DP=462;FS=1.462;HRun=0;HaplotypeScore=82.6938;InbreedingCoeff=0.9192;MQ=69.67;MQ0=4;MQRankSum=-0.591;QD=18.86;ReadPosRankSum=2.642;VQSLOD=3.5163;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,20:24:30.01:464,30,0	0/0:8,0:8:21.07:0,21,296	0/0:15,0:7:14.07:0,14,166	0/0:16,0:13:32.67:0,33,356	1/1:3,27:30:57.58:862,58,0	0/0:15,0:15:36.12:0,36,524	0/0:8,0:8:18.06:0,18,263	0/0:25,0:24:51.10:0,51,656	0/0:14,0:14:26.81:0,27,345	0/0:22,0:22:56.21:0,56,786	0/0:22,0:22:51.03:0,51,619	0/0:13,0:13:27.09:0,27,408	0/0:5,0:5:9.02:0,9,115	0/0:12,0:12:24.07:0,24,325	0/0:12,0:11:24.07:0,24,330	1/1:1,17:18:21.07:357,21,0	0/0:17,0:17:35.91:0,36,490	1/1:2,5:10:3.01:53,3,0	0/0:16,0:16:45.08:0,45,592	0/0:17,0:17:38.99:0,39,508	0/0:20,0:20:48.13:0,48,633	0/0:14,0:13:30.06:0,30,392	0/0:14,0:14:36.11:0,36,501	0/0:25,0:25:63.64:0,64,900	0/0:15,0:15:33.11:0,33,470	0/0:22,0:22:51.15:0,51,702	0/0:24,0:24:39.32:0,39,588	0/0:7,0:6:17.73:0,18,220
chr10	57756327	.	A	AT	8237.33	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-13.400;DP=523;FS=3.171;HRun=8;HaplotypeScore=47.2335;InbreedingCoeff=0.9208;MQ=62.09;MQ0=4;MQRankSum=-0.361;QD=27.37;ReadPosRankSum=-0.677;VQSLOD=5.1750;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:87.04:0,87,796	1/1:1,4:5:12.04:138,12,0	0/0:19,0:7:2.70:0,3,21	0/0:6,0:5:4.06:0,4,52	0/0:20,0:20:42.01:0,42,384	0/0:22,0:22:57.03:0,57,522	0/0:18,0:18:51.02:0,51,467	1/1:8,31:39:90.17:997,90,0	1/1:2,13:15:33.10:381,33,0	1/1:4,17:21:51.15:588,51,0	1/1:4,15:19:42.12:482,42,0	0/0:12,0:12:36.02:0,36,330	0/0:12,0:12:24.98:0,25,243	0/0:18,0:18:45.01:0,45,411	1/1:2,22:24:54.16:623,54,0	0/0:18,0:18:45:0,45,407	1/1:5,28:33:76.92:898,77,0	0/0:14,0:14:14.51:0,15,280	1/1:6,21:26:60.16:677,60,0	1/1:2,22:24:63.19:727,63,0	1/1:1,6:7:18.05:208,18,0	0/0:1,0:1:3:0,3,27	0/0:12,0:12:27:0,27,247	0/0:19,0:19:47.99:0,48,431	1/1:1,17:18:48.14:554,48,0	1/1:1,23:24:69.20:796,69,0	1/1:3,32:35:87.25:996,87,0	1/1:5,5:10:15.04:173,15,0
chr10	57756507	.	A	ATTACAGTGG	5100.77	PASS	AB=0.611;AC=7;AF=0.125;AN=56;BaseQRankSum=-3.237;DP=386;FS=1.350;HRun=0;HaplotypeScore=101.0827;InbreedingCoeff=0.7978;MQ=62.38;MQ0=0;MQRankSum=-9.529;QD=87.94;ReadPosRankSum=-1.773;VQSLOD=4.7664;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,9:16:27.05:1090,27,0	0/0:5,0:5:15.05:0,15,465	0/0:8,0:8:24.08:0,24,648	0/0:16,0:16:48.14:0,48,1372	1/1:8,14:25:54.14:2297,54,0	0/0:20,0:20:54.19:0,54,1633	0/0:8,0:8:24.08:0,24,745	0/0:28,0:28:72.22:0,72,1973	0/0:4,0:4:9.03:0,9,279	0/0:15,0:15:45.15:0,45,1358	0/0:12,0:12:36.12:0,36,1117	0/0:8,0:8:21.07:0,21,617	0/0:9,0:9:24.08:0,24,741	0/0:11,0:11:30.10:0,30,886	0/0:20,0:20:60.21:0,60,1821	0/1:4,6:10:66.05:980,0,66	0/0:24,0:24:69.22:0,69,2025	1/1:1,4:5:15.05:734,15,0	0/0:15,0:15:39.13:0,39,1208	0/0:16,0:16:45.15:0,45,1356	0/0:23,0:23:66.23:0,66,2027	0/0:6,0:6:18.06:0,18,559	0/0:4,0:4:12.04:0,12,372	0/0:15,0:15:45.15:0,45,1392	0/0:15,0:15:45.15:0,45,1392	0/0:16,0:16:48.16:0,48,1441	0/0:16,0:16:48.16:0,48,1440	0/0:14,0:14:36.12:0,36,1042
chr10	57757094	.	G	GA	1317.96	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-6.867;DP=513;FS=5.580;HRun=8;HaplotypeScore=48.2281;InbreedingCoeff=0.8592;MQ=76.83;MQ0=1;MQRankSum=1.013;QD=26.36;ReadPosRankSum=1.861;VQSLOD=4.4143;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,12:14:36.11:415,36,0	0/0:10,0:10:18:0,18,165	0/0:7,0:7:12:0,12,109	0/0:15,0:15:21.64:0,22,209	1/1:3,32:36:93.02:1024,93,0	0/0:32,0:32:87.04:0,87,796	0/0:11,0:11:27.01:0,27,247	0/0:31,0:31:72:0,72,653	0/0:19,0:19:54.01:0,54,489	0/0:22,0:22:60.02:0,60,546	0/0:27,0:27:66.01:0,66,604	0/0:16,0:16:32.98:0,33,292	0/0:12,1:13:1.42:0,1,267	0/0:7,0:7:21.01:0,21,192	0/0:20,0:20:60.01:0,60,540	0/0:20,0:19:51.01:0,51,462	0/0:14,0:14:39.02:0,39,357	0/0:9,0:9:21.01:0,21,192	0/0:10,0:10:30.02:0,30,275	0/0:27,0:27:69.03:0,69,631	0/0:17,0:18:50.06:0,50,445	0/0:19,0:19:57.01:0,57,516	0/0:14,0:14:35.04:0,35,308	0/0:12,0:12:36.02:0,36,329	0/0:29,0:29:84.04:0,84,769	0/0:16,0:16:42.02:0,42,384	0/0:37,0:37:96.02:0,96,873	0/0:8,0:8:11.07:0,11,179
chr10	57758055	.	G	GA	1782.39	PASS	AB=0.867;AC=32;AF=0.571;AN=56;BaseQRankSum=1.976;DP=485;FS=15.234;HRun=13;HaplotypeScore=80.7872;InbreedingCoeff=0.0579;MQ=42.41;MQ0=60;MQRankSum=-3.798;QD=4.55;ReadPosRankSum=-2.832;VQSLOD=-0.2470;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:23:23.27:112,23,0	0/1:11,1:8:29.10:43,0,29	0/1:27,0:2:0:0,0,0	0/0:32,0:3:1.81:0,2,5	1/1:15,0:13:12.40:65,12,0	0/1:16,0:14:6.92:7,0,84	0/0:10,0:11:7.46:0,7,82	0/1:15,3:18:0.62:134,0,1	0/1:9,6:13:12.85:21,0,13	0/1:11,7:17:3.13:105,0,3	0/1:17,2:17:9.66:139,0,10	0/0:16,0:15:3.46:0,3,41	1/1:6,0:6:0.89:2,1,0	0/0:14,0:12:2.44:0,2,10	1/1:8,7:13:21.02:192,21,0	1/1:22,0:21:29.36:139,29,0	0/1:21,2:21:37.83:93,0,38	1/1:11,0:6:7.82:45,8,0	1/1:15,5:15:5.07:56,5,0	1/1:14,3:16:29.72:234,30,0	0/0:3,0:5:4.53:0,5,13	0/1:13,0:11:10.16:10,0,29	0/1:11,1:12:11.66:12,0,65	0/0:13,0:7:5.95:0,6,41	0/1:7,8:14:27.24:44,0,27	1/1:13,15:25:24.02:310,24,0	0/1:23,5:23:24.67:148,0,25	1/1:5,2:4:3.47:29,3,0
chr10	57760229	.	GAC	G	1283.83	PASS	AB=0.863;AC=37;AF=0.740;AN=50;BaseQRankSum=3.805;DP=401;FS=6.648;HRun=0;HaplotypeScore=70.6908;InbreedingCoeff=-0.0001;MQ=75.12;MQ0=13;MQRankSum=-1.796;QD=4.17;ReadPosRankSum=2.282;VQSLOD=1.0363;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:22:5.68:28,6,0	0/1:6,1:9:17.46:17,0,122	./.	./.	1/1:10,0:16:1.36:3,1,0	0/1:15,1:17:28.39:28,0,137	0/1:18,0:16:22.51:23,0,126	./.	0/1:5,5:10:13.33:26,0,13	1/1:11,4:15:12.01:119,12,0	1/1:5,1:10:9.16:61,9,0	0/1:9,3:11:48.29:53,0,48	0/1:4,0:4:11.82:12,0,38	0/0:9,0:9:18.06:0,18,260	1/1:5,7:13:17.88:176,18,0	1/1:8,0:13:11.32:55,11,0	0/1:11,1:16:17.32:17,0,107	1/1:4,0:6:8.52:42,9,0	1/1:9,4:12:8.99:79,9,0	1/1:9,5:13:9.02:97,9,0	1/1:15,7:22:3.01:32,3,0	0/1:5,2:7:46.63:47,0,123	0/1:8,3:11:20.31:20,0,96	0/0:26,0:27:12.96:0,13,340	1/1:8,9:16:15.04:162,15,0	1/1:17,0:18:11.83:96,12,0	1/1:6,6:12:12.03:129,12,0	1/1:2,2:7:14.69:116,15,0
chr10	57760323	.	TTTTTTTC	T	190.70	PASS	AB=0.907;AC=4;AF=0.071;AN=56;BaseQRankSum=5.402;DP=392;FS=2.322;HRun=0;HaplotypeScore=78.3526;InbreedingCoeff=0.1020;MQ=43.01;MQ0=41;MQRankSum=-2.264;QD=3.47;ReadPosRankSum=1.463;VQSLOD=1.4037;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:8,5:10:29.21:87,0,29	0/0:10,0:10:27:0,27,549	0/0:16,0:4:12.03:0,12,222	0/0:9,0:3:5.74:0,6,52	0/1:17,2:16:37.75:38,0,66	0/0:20,0:18:50.93:0,51,909	0/0:18,0:15:33.03:0,33,622	0/0:22,0:19:51.37:0,51,802	0/0:9,0:9:19.59:0,20,359	0/0:13,0:12:34.23:0,34,548	0/0:12,0:12:31.91:0,32,627	0/0:10,0:8:22.97:0,23,348	0/0:6,0:3:6.02:0,6,115	0/0:5,0:5:14.07:0,14,244	0/0:17,0:16:35.47:0,35,751	0/1:12,0:12:0.72:135,0,1	0/0:26,0:23:57.63:0,58,1180	0/1:11,0:7:39.75:40,0,50	0/0:17,0:16:48.07:0,48,907	0/0:9,0:8:18.06:0,18,321	0/0:10,0:8:23.96:0,24,285	0/0:8,0:8:16.30:0,16,293	0/0:11,0:11:26.70:0,27,535	0/0:21,0:18:34.19:0,34,629	0/0:16,0:16:48.08:0,48,972	0/0:19,0:17:49.31:0,49,922	0/0:19,0:18:48.15:0,48,1064	0/0:14,0:11:27.30:0,27,152
chr10	57760324	.	TTTTTTC	T	356.58	PASS	AB=0.958;AC=6;AF=0.107;AN=56;BaseQRankSum=5.389;DP=379;FS=3.587;HRun=0;HaplotypeScore=68.1700;InbreedingCoeff=0.5656;MQ=41.17;MQ0=42;MQRankSum=-3.087;QD=6.99;ReadPosRankSum=1.947;VQSLOD=0.7619;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:10,2:9:4.60:105,5,0	0/0:10,0:10:27:0,27,467	0/0:16,0:4:11.97:0,12,175	0/0:7,0:2:3:0,3,41	0/1:17,0:14:18.78:42,0,19	0/0:18,0:16:44.92:0,45,710	0/0:18,0:14:33.01:0,33,522	0/0:21,0:18:48.31:0,48,633	0/0:8,0:8:18.92:0,19,307	0/0:13,0:12:33.82:0,34,470	0/0:11,0:11:31.24:0,31,520	0/0:10,0:8:22.46:0,22,289	0/0:6,0:3:5.98:0,6,96	0/0:5,0:5:13.59:0,14,205	0/0:15,0:14:33.10:0,33,637	1/1:10,1:11:21.60:266,22,0	0/0:25,0:22:57.62:0,58,965	0/1:10,1:7:2.51:69,0,3	0/0:17,0:16:41.49:0,41,733	0/0:9,0:8:18.03:0,18,257	0/0:10,0:8:23.50:0,23,210	0/0:8,0:8:15.92:0,16,233	0/0:12,0:12:29.58:0,30,479	0/0:21,0:18:33.22:0,33,492	0/0:16,0:16:48.04:0,48,832	0/0:19,0:17:48.90:0,49,792	0/0:19,0:18:48.12:0,48,877	0/0:14,0:11:25.62:0,26,143
chr10	57760693	.	TC	T	1148.98	PASS	AB=0.750;AC=14;AF=0.250;AN=56;BaseQRankSum=-2.371;DP=369;FS=0.000;HRun=3;HaplotypeScore=131.2203;InbreedingCoeff=-0.2166;MQ=47.98;MQ0=10;MQRankSum=0.294;QD=6.53;ReadPosRankSum=0.528;VQSLOD=0.4001;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:21,2:22:62.62:63,0,88	0/0:7,0:6:8.43:0,8,96	0/0:5,0:3:5.27:0,5,28	0/0:18,0:8:2.73:0,3,52	0/0:7,0:6:2.84:0,3,75	0/0:15,0:15:37.65:0,38,446	0/0:20,0:19:39.66:0,40,478	0/0:31,0:28:64.76:0,65,582	0/1:8,7:15:99:212,0,181	0/1:22,5:24:74.32:74,0,396	0/1:4,3:7:26.09:26,0,93	0/1:11,0:11:4.04:4,0,109	0/0:8,0:8:16.45:0,16,211	0/0:11,0:11:30.11:0,30,363	0/1:4,4:8:85.31:85,0,99	0/0:8,0:8:17.83:0,18,154	0/0:15,1:16:7.43:0,7,431	1/1:1,5:5:8.92:143,9,0	0/0:15,0:15:6.92:0,7,160	0/1:2,3:5:64.37:92,0,64	0/1:6,11:16:69.16:69,0,73	0/0:8,0:8:18.06:0,18,262	0/0:3,0:3:3.01:0,3,43	0/0:21,0:20:40.77:0,41,509	0/1:12,2:12:44.37:44,0,118	0/1:15,4:18:99:102,0,280	0/1:5,9:14:19.07:285,0,19	0/1:4,5:8:27.45:101,0,27
chr10	57760708	.	TA	T	1474.59	PASS	AB=0.918;AC=26;AF=0.464;AN=56;BaseQRankSum=2.503;DP=317;FS=13.341;HRun=1;HaplotypeScore=123.1350;InbreedingCoeff=-0.5459;MQ=52.13;MQ0=3;MQRankSum=-2.707;QD=5.42;ReadPosRankSum=2.247;VQSLOD=-0.6492;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:14,4:17:99:194,0,117	0/1:2,1:3:0.81:20,0,1	1/1:8,0:4:2.70:28,3,0	0/0:16,0:9:9.54:0,10,157	0/1:5,1:6:1.87:2,0,80	0/1:13,0:13:26.23:26,0,121	0/0:17,0:17:8.98:0,9,169	0/1:23,0:21:57:198,0,57	0/1:12,2:14:17.13:94,0,17	0/1:19,1:18:99:108,0,143	0/1:7,0:7:37.86:38,0,42	0/1:7,1:8:25.93:60,0,26	0/1:7,0:7:15.60:62,0,16	0/1:11,0:11:17.99:18,0,99	0/1:6,2:8:19.82:65,0,20	0/0:7,0:7:10.40:0,10,75	0/1:13,1:14:23.58:148,0,24	0/1:5,0:4:4.27:4,0,29	0/1:14,0:14:59.28:59,0,127	0/1:3,1:4:23.18:29,0,23	0/1:14,2:14:27.47:81,0,27	0/1:6,0:6:6.37:6,0,57	0/0:4,0:4:2.90:0,3,16	0/1:19,1:19:14.84:15,0,125	0/1:10,0:10:8.76:99,0,9	0/1:15,2:16:99:145,0,160	0/1:8,3:11:53.94:72,0,54	1/1:9,0:8:9.75:56,10,0
chr10	57760713	.	TA	T	2202.40	PASS	AB=0.802;AC=24;AF=0.429;AN=56;BaseQRankSum=1.416;DP=292;FS=17.902;HRun=1;HaplotypeScore=115.0951;InbreedingCoeff=-0.4901;MQ=50.79;MQ0=3;MQRankSum=-3.308;QD=9.22;ReadPosRankSum=3.977;VQSLOD=-0.0078;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,1:16:0.97:0,1,145	0/1:2,1:3:13.10:49,0,13	0/0:6,0:2:5.75:0,6,41	0/0:14,0:9:18.07:0,18,152	0/0:6,0:6:10.05:0,10,77	0/1:11,2:13:60.68:61,0,117	0/1:16,1:17:18.66:19,0,151	0/1:6,14:18:10.54:423,0,11	0/1:8,5:13:25.26:202,0,25	0/1:15,4:17:99:155,0,124	0/1:5,2:7:30.47:69,0,30	0/1:5,3:8:34.03:36,0,34	0/1:2,2:4:10.75:31,0,11	0/1:8,0:8:18.34:18,0,79	1/1:6,2:8:4.84:103,5,0	0/0:6,0:6:11.80:0,12,79	0/1:8,5:13:4.37:256,0,4	0/1:5,0:4:16.55:29,0,17	0/1:12,4:16:96.16:160,0,96	0/1:3,1:4:15.43:52,0,15	0/1:10,4:12:20.54:148,0,21	0/1:4,2:6:23.40:23,0,44	0/0:4,0:4:2.90:0,3,16	0/1:15,2:16:72:72,0,112	0/1:6,3:9:4.57:142,0,5	0/1:12,6:17:99:150,0,137	0/1:10,1:11:15.56:74,0,16	1/1:4,2:5:7.27:85,7,0
chr10	57760723	.	T	TC	1720.68	PASS	AB=0.820;AC=25;AF=0.446;AN=56;BaseQRankSum=-1.993;DP=263;FS=7.378;HRun=2;HaplotypeScore=106.0973;InbreedingCoeff=-0.3288;MQ=48.69;MQ0=3;MQRankSum=-1.964;QD=7.97;ReadPosRankSum=-3.222;VQSLOD=-0.3651;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:7,11:17:5.44:291,0,5	1/1:1,1:2:2.99:24,3,0	0/0:6,0:2:2.96:0,3,19	0/1:11,0:7:18.12:18,0,55	1/1:3,3:6:11.83:141,12,0	0/0:10,1:11:9.64:0,10,241	0/1:8,5:13:25.28:25,0,138	0/1:15,5:18:99:135,0,146	0/1:10,4:14:17.41:138,0,17	0/1:11,6:15:99:250,0,111	0/1:5,3:7:24.71:89,0,25	0/1:9,0:9:26.65:27,0,110	0/0:5,0:5:10.77:0,11,101	0/0:5,0:5:7.54:0,8,92	0/1:5,1:6:33.91:34,0,67	1/1:2,2:4:6.02:73,6,0	0/1:9,3:12:95.84:171,0,96	1/1:4,0:3:3.01:43,3,0	0/1:13,1:13:5.58:6,0,197	0/1:2,1:3:9.16:35,0,9	0/1:10,5:13:72.71:73,0,121	0/1:5,0:5:10.60:11,0,51	0/0:4,0:4:2.37:0,2,36	0/1:12,1:12:27.67:28,0,223	0/0:8,1:9:16.26:0,16,137	0/1:11,4:14:41.13:210,0,41	0/0:6,1:7:8.53:0,9,67	0/1:4,2:5:32.28:59,0,32
chr10	57760732	.	T	TC	724.94	PASS	AB=0.822;AC=18;AF=0.333;AN=54;BaseQRankSum=-0.712;DP=187;FS=0.000;HRun=2;HaplotypeScore=89.7453;InbreedingCoeff=-0.0215;MQ=39.47;MQ0=1;MQRankSum=0.252;QD=5.85;ReadPosRankSum=-1.308;VQSLOD=0.0195;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,8:14:12.36:129,12,0	0/0:0,1:1:2.50:0,2,9	0/0:1,0:1:3:0,3,26	0/0:6,0:3:6:0,6,52	1/1:2,2:4:5.22:32,5,0	0/0:8,0:8:22.71:0,23,193	0/0:8,0:8:11.98:0,12,113	0/0:8,2:8:9.75:0,10,78	0/1:5,5:10:16.77:166,0,17	0/1:11,2:13:51.89:52,0,130	0/1:7,1:7:27.99:39,0,28	0/1:4,1:5:18.29:18,0,81	0/0:4,0:4:8.93:0,9,69	0/0:3,0:3:5.96:0,6,56	0/1:4,1:5:25.28:25,0,62	0/0:4,0:4:0.56:0,1,2	0/1:6,6:12:99:174,0,112	1/1:0,1:1:2.98:22,3,0	0/1:8,2:9:17.87:18,0,173	0/0:1,0:1:2.99:0,3,24	0/1:14,1:13:2.66:3,0,110	0/0:2,0:2:6.01:0,6,60	./.	0/1:9,1:9:10.81:11,0,43	0/0:9,0:9:15.41:0,15,144	0/1:8,3:10:78.83:134,0,79	0/0:4,0:4:2.96:0,3,19	1/1:2,3:4:7.50:54,8,0
chr10	57761527	.	CT	C	909.12	PASS	AB=0.842;AC=30;AF=0.882;AN=34;BaseQRankSum=-3.486;DP=92;FS=0.000;HRun=2;HaplotypeScore=20.7014;InbreedingCoeff=-0.0912;MQ=40.77;MQ0=7;MQRankSum=3.058;QD=10.95;ReadPosRankSum=0.398;VQSLOD=1.4461;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,1:1:3.01:39,3,0	./.	./.	./.	./.	1/1:1,2:3:3.43:73,3,0	1/1:0,12:10:12.91:144,13,0	1/1:2,2:2:5.98:58,6,0	./.	0/1:4,1:5:23.83:24,0,112	0/1:4,1:4:2.22:34,0,2	./.	1/1:2,0:2:5.83:33,6,0	0/1:3,0:3:0.01:0,0,0	1/1:0,5:5:11.94:116,12,0	1/1:0,2:2:3.01:36,3,0	1/1:10,0:8:14.11:66,14,0	./.	1/1:0,1:1:3.01:39,3,0	./.	1/1:0,8:8:6.90:80,7,0	./.	./.	1/1:9,0:8:5.19:20,5,0	0/1:4,3:6:24.55:72,0,25	1/1:2,1:2:6.01:66,6,0	1/1:0,3:3:9.02:102,9,0	./.
chr10	57761529	.	TC	T	530.24	PASS	AB=0.929;AC=32;AF=0.762;AN=42;BaseQRankSum=-0.107;DP=104;FS=0.000;HRun=3;HaplotypeScore=21.3726;InbreedingCoeff=0.0671;MQ=41.29;MQ0=7;MQRankSum=0.000;QD=5.70;ReadPosRankSum=2.191;VQSLOD=0.4989;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,0:2:2.98:21,3,0	./.	./.	./.	./.	1/1:3,0:3:7.90:34,8,0	1/1:13,0:11:14.12:62,14,0	1/1:4,0:2:4.76:22,5,0	./.	0/1:5,0:5:4.08:4,0,86	0/1:5,0:4:0.82:9,0,1	0/0:1,0:1:3:0,3,25	1/1:0,2:2:6.02:74,6,0	0/1:1,3:4:14.12:14,0,19	1/1:6,0:6:7.31:44,7,0	1/1:3,0:3:2.94:18,3,0	1/1:1,9:9:15.41:148,15,0	./.	0/1:2,0:2:1.09:7,0,1	1/1:1,0:1:0.47:1,0,0	0/1:9,0:9:13.10:24,0,13	./.	0/0:1,0:1:3:0,3,25	1/1:2,7:8:6.02:74,6,0	0/1:7,0:6:19.53:22,0,20	1/1:4,0:3:2.42:11,2,0	1/1:3,0:3:5.55:33,6,0	1/1:1,0:1:2.98:22,3,0
chr10	57761677	.	AGCCCT	A	752.56	PASS	AC=2;AF=0.037;AN=54;BaseQRankSum=5.232;DP=561;FS=11.518;HRun=0;HaplotypeScore=104.6659;InbreedingCoeff=0.9917;MQ=76.87;MQ0=0;MQRankSum=-0.664;QD=39.61;ReadPosRankSum=1.967;VQSLOD=3.2698;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,151,4743	0/0:8,0:8:24.05:0,24,621	0/0:22,0:21:63.22:0,63,1869	0/0:27,0:25:72.20:0,72,2062	0/0:11,0:11:30.10:0,30,924	0/0:17,0:17:51.18:0,51,1614	0/0:41,0:40:99:0,117,3640	0/0:19,0:19:51.18:0,51,1617	0/0:17,0:17:51.18:0,51,1615	0/0:16,0:16:48.16:0,48,1426	0/0:9,0:9:27.09:0,27,855	0/0:17,0:17:51.18:0,51,1576	0/0:12,0:12:36.12:0,36,1095	0/0:17,0:17:51.18:0,51,1617	0/0:22,0:22:66.20:0,66,1889	1/1:0,19:19:39.13:847,39,0	0/0:31,0:31:93.28:0,93,2789	0/0:11,0:11:30.07:0,30,874	0/0:7,0:7:21.07:0,21,664	0/0:19,0:19:57.18:0,57,1715	0/0:47,0:47:99:0,132,4122	0/0:18,0:18:51.16:0,51,1525	0/0:15,0:15:45.15:0,45,1402	0/0:41,0:41:99:0,120,3737	0/0:15,0:15:42.14:0,42,1331	0/0:16,0:16:42.14:0,42,1332	0/0:17,0:16:48.15:0,48,1450	./.
chr10	57762665	.	ATG	A	15261.07	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=11.226;DP=1072;FS=3.809;HRun=0;HaplotypeScore=160.4639;InbreedingCoeff=0.9953;MQ=56.84;MQ0=25;MQRankSum=-0.445;QD=22.34;ReadPosRankSum=5.845;VQSLOD=5.2120;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,27:35:51.16:643,51,0	1/1:4,18:22:45.14:568,45,0	0/0:31,0:16:39.72:0,40,573	0/0:28,0:17:39.01:0,39,562	1/1:6,27:31:63.20:795,63,0	0/0:39,0:38:84.09:0,84,1291	0/0:39,1:38:55.44:0,55,1385	1/1:24,38:50:99:1374,114,0	1/1:4,39:43:87.28:1097,87,0	1/1:11,45:54:99:1743,141,0	1/1:3,15:18:30.10:379,30,0	0/0:41,1:41:49.41:0,49,1294	0/0:56,0:56:99:0,126,2054	0/0:43,1:44:69.02:0,69,1107	1/1:9,46:55:81.21:1022,81,0	1/1:8,37:44:69.22:870,69,0	1/1:6,32:38:67.98:815,68,0	1/1:8,34:40:66.21:829,66,0	1/1:11,16:23:45.13:550,45,0	1/1:5,26:31:53.76:681,54,0	1/1:20,42:57:84.27:1059,84,0	0/0:33,0:33:96.29:0,96,1526	0/0:32,0:32:69.16:0,69,1032	0/0:44,0:43:99:0,99,1568	1/1:3,21:24:39.12:492,39,0	1/1:5,32:36:93.26:1152,93,0	1/1:6,37:43:70.01:1042,70,0	1/1:3,7:10:12.04:151,12,0
chr10	57763106	.	A	ATT	3871.86	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=11.777;DP=535;FS=29.324;HRun=9;HaplotypeScore=86.9398;InbreedingCoeff=0.9738;MQ=72.09;MQ0=1;MQRankSum=-0.541;QD=10.70;ReadPosRankSum=-1.398;VQSLOD=-0.3956;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:9,0:21:45.04:470,45,0	1/1:0,0:3:4.99:17,5,0	0/0:13,0:11:16.54:0,17,151	0/0:13,0:12:14.70:0,15,139	1/1:6,2:25:68.98:677,69,0	0/0:21,0:22:51.30:0,51,570	0/0:20,0:21:52.35:0,52,551	1/1:14,0:48:52.33:281,52,0	1/1:2,0:15:25.33:92,25,0	1/1:2,0:23:55.39:204,55,0	1/1:1,0:16:30.42:114,30,0	0/0:16,0:17:35.93:0,36,438	0/0:12,0:12:30.07:0,30,319	0/0:16,0:16:26.58:0,27,331	1/1:2,0:16:32.44:111,32,0	1/1:0,17:17:39.13:600,39,0	1/1:2,0:14:22.46:77,22,0	1/1:4,0:22:39.93:137,40,0	1/1:8,1:32:56.89:268,57,0	1/1:0,0:16:41.35:172,41,0	1/1:1,0:14:24.83:86,25,0	0/0:20,0:20:57.14:0,57,607	0/0:19,0:19:45.08:0,45,471	0/0:18,0:20:32.96:0,33,462	1/1:1,0:14:32.74:116,33,0	1/1:1,0:29:67.99:242,68,0	1/1:4,0:25:15.87:122,16,0	1/1:1,0:11:24.95:86,25,0
chr10	57763360	.	CTT	C	867.19	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=2.822;DP=425;FS=2.895;HRun=16;HaplotypeScore=57.1722;InbreedingCoeff=0.8326;MQ=76.00;MQ0=3;MQRankSum=1.032;QD=11.72;ReadPosRankSum=3.695;VQSLOD=2.6468;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:13,27:42:42.05:474,42,0	0/0:8,0:8:11.99:0,12,113	0/0:20,0:12:7.59:0,8,55	0/0:17,0:13:9.11:0,9,73	1/1:2,12:14:29.84:251,30,0	0/0:3,0:12:12.91:0,13,73	0/0:10,0:14:19.04:0,19,143	0/0:24,1:24:10.92:0,11,334	0/0:10,0:9:14.94:0,15,132	0/0:19,0:19:33.03:0,33,336	0/0:13,0:13:27.03:0,27,281	0/0:14,0:17:31.05:0,31,228	0/0:8,0:8:17.97:0,18,152	0/0:13,0:14:27:0,27,271	0/0:10,0:14:26.95:0,27,271	0/0:1,0:4:4.74:0,5,17	0/0:26,0:26:35.10:0,35,512	1/1:8,9:18:29.78:284,30,0	0/0:6,0:6:5.99:0,6,50	0/0:8,0:9:20.35:0,20,181	0/0:10,0:10:22.85:0,23,194	0/0:4,0:11:18.33:0,18,97	0/0:8,0:8:17.47:0,17,143	0/0:12,0:13:17.60:0,18,78	0/0:14,0:14:32.94:0,33,317	0/0:22,0:21:42.88:0,43,411	0/0:25,0:25:59.36:0,59,575	0/0:5,0:8:19.74:0,20,157
chr10	57764776	.	C	CT	721.71	PASS	AB=0.950;AC=8;AF=0.143;AN=56;BaseQRankSum=0.668;DP=535;FS=4.322;HRun=11;HaplotypeScore=68.1056;InbreedingCoeff=0.3514;MQ=72.50;MQ0=1;MQRankSum=-3.141;QD=5.39;ReadPosRankSum=-1.560;VQSLOD=1.4442;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:21,14:35:21.26:497,21,0	0/0:5,0:6:13.95:0,14,95	0/0:21,0:18:21.10:0,21,140	0/1:13,0:10:14.33:14,0,43	1/1:9,12:21:13.76:318,14,0	0/0:18,0:18:38.79:0,39,302	0/0:7,0:7:20.90:0,21,159	0/0:21,0:21:35.29:0,35,260	0/0:22,0:23:52.78:0,53,396	0/1:28,0:28:6.72:7,0,314	0/0:23,0:23:47.74:0,48,366	0/0:17,0:17:37.09:0,37,281	0/1:13,2:15:16.08:16,0,251	0/0:9,0:9:23.90:0,24,186	0/0:15,0:15:44.06:0,44,332	0/0:30,0:31:71.44:0,71,549	0/0:20,1:21:26.34:0,26,387	0/0:18,0:18:35.68:0,36,278	0/0:23,0:24:3.45:0,3,230	0/1:20,2:22:8.06:8,0,301	0/0:11,0:11:14.90:0,15,116	0/0:12,1:13:5.40:0,5,222	0/0:20,0:20:23.52:0,24,350	0/0:13,0:13:29.79:0,30,221	0/0:20,0:21:16.95:0,17,299	0/0:27,2:29:1.58:0,2,369	0/0:25,0:27:73.76:0,74,563	0/0:12,0:13:28.91:0,29,215
chr10	57764814	.	G	GGGCCTT	1768.90	PASS	AB=0.830;AC=4;AF=0.071;AN=56;BaseQRankSum=7.435;DP=515;FS=25.639;HRun=0;HaplotypeScore=118.0264;InbreedingCoeff=-0.0782;MQ=56.83;MQ0=4;MQRankSum=-7.014;QD=18.43;ReadPosRankSum=-1.597;VQSLOD=1.3049;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:21,10:31:99:1015,0,843	0/0:5,0:5:15.05:0,15,352	0/0:30,0:11:30.10:0,30,730	0/0:18,0:12:27.02:0,27,639	0/1:25,7:32:99:542,0,964	0/0:22,0:22:63.20:0,63,1474	0/0:14,0:14:42.11:0,42,926	0/0:29,0:29:81.22:0,81,1678	0/0:21,0:21:57.18:0,57,1325	0/0:15,0:15:45.15:0,45,1048	0/0:23,0:23:69.24:0,69,1695	0/0:18,0:18:54.15:0,54,1125	0/0:16,0:16:48.08:0,48,1049	0/0:6,0:6:18.06:0,18,443	0/0:20,0:20:60.21:0,60,1474	0/1:21,1:22:42.83:43,0,1144	0/0:20,0:20:57.12:0,57,1271	0/1:8,3:11:99:279,0,436	0/0:14,0:14:39.08:0,39,859	0/0:21,0:21:63.22:0,63,1522	0/0:7,0:7:21.04:0,21,419	0/0:16,0:16:48.12:0,48,1006	0/0:18,0:18:54.19:0,54,1314	0/0:9,0:9:24.08:0,24,591	0/0:17,0:17:51.16:0,51,1208	0/0:24,0:24:69.23:0,69,1650	0/0:26,0:26:78.25:0,78,1785	0/0:10,0:9:27.09:0,27,664
chr10	57766278	.	G	GC	984.65	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-7.958;DP=753;FS=0.742;HRun=2;HaplotypeScore=71.0050;InbreedingCoeff=0.9833;MQ=69.03;MQ0=0;MQRankSum=-2.857;QD=33.95;ReadPosRankSum=-0.676;VQSLOD=3.4116;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,99,1184	0/0:9,0:9:27.08:0,27,335	0/0:23,0:23:69.19:0,69,824	0/0:30,0:29:65.37:0,65,822	0/0:37,0:37:99:0,108,1288	0/0:28,0:28:84.23:0,84,1004	0/0:16,0:16:48.13:0,48,582	0/0:38,0:38:99:0,108,1314	0/0:27,0:27:81.24:0,81,991	0/0:32,0:32:93.28:0,93,1143	0/0:23,0:23:69.22:0,69,853	0/0:17,0:17:51.15:0,51,620	0/0:40,0:40:99:0,105,1301	0/0:23,0:23:66.19:0,66,805	0/0:40,0:40:99:0,108,1338	1/1:0,29:29:75.25:1080,75,0	0/0:21,0:21:63.20:0,63,780	0/0:6,0:6:15.05:0,15,186	0/0:15,0:15:42.13:0,42,520	0/0:32,0:32:84.25:0,84,1028	0/0:45,0:45:99:0,129,1571	0/0:14,0:14:42.13:0,42,520	0/0:24,0:24:69.19:0,69,831	0/0:26,0:26:69.22:0,69,854	0/0:42,0:42:99:0,126,1547	0/0:40,0:40:99:0,120,1466	0/0:29,0:29:87.26:0,87,1067	0/0:12,0:12:36.08:0,36,419
chr10	57768812	.	GT	G	1059.77	PASS	AB=0.901;AC=11;AF=0.196;AN=56;BaseQRankSum=7.404;DP=611;FS=13.121;HRun=13;HaplotypeScore=64.0227;InbreedingCoeff=0.5912;MQ=64.22;MQ0=1;MQRankSum=0.523;QD=7.02;ReadPosRankSum=1.706;VQSLOD=0.9265;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,25:36:49.67:356,50,0	0/1:9,2:11:19.78:20,0,150	0/0:17,0:9:11.97:0,12,100	0/1:23,0:14:0.09:0,0,87	1/1:7,16:24:20.52:305,21,0	0/0:24,3:27:28.18:0,28,570	0/0:14,0:16:35.81:0,36,318	0/0:31,1:33:50.03:0,50,615	0/0:19,0:19:25.24:0,25,389	0/0:23,1:25:22.94:0,23,358	0/0:22,0:23:25.66:0,26,419	0/1:19,3:24:11.56:12,0,390	0/0:11,1:13:4.98:0,5,197	0/0:20,0:20:30.50:0,30,422	0/0:24,0:27:52.18:0,52,533	1/1:2,14:17:43.79:312,44,0	0/0:21,1:24:31.18:0,31,482	1/1:1,15:16:29.82:219,30,0	0/0:13,1:12:5.08:0,5,193	0/0:25,1:26:32.15:0,32,463	0/0:14,1:15:16.64:0,17,304	0/0:22,3:25:23.40:0,23,510	0/0:21,1:23:35.20:0,35,512	0/0:15,2:18:0.50:0,0,359	0/0:28,4:32:18.39:0,18,658	0/0:24,3:26:6.98:0,7,359	0/0:24,1:25:37.79:0,38,495	0/0:9,1:10:8.14:0,8,240
chr10	57775618	.	C	CA	1905.43	PASS	AB=0.782;AC=26;AF=0.464;AN=56;BaseQRankSum=4.524;DP=491;FS=0.000;HRun=14;HaplotypeScore=67.2370;InbreedingCoeff=0.5436;MQ=57.49;MQ0=22;MQRankSum=-1.105;QD=6.62;ReadPosRankSum=-1.225;VQSLOD=2.1553;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:41:83.85:0,84,508	0/0:8,0:9:17.70:0,18,115	0/0:11,0:4:5.78:0,6,35	0/0:6,0:5:5.01:0,5,16	0/0:28,1:29:38.31:0,38,249	0/1:19,2:20:6.45:6,0,208	0/0:14,0:15:34.50:0,34,217	0/1:20,1:20:22.92:23,0,98	1/1:4,4:8:6.31:42,6,0	1/1:6,1:24:32.87:277,33,0	1/1:7,5:16:37.94:257,38,0	0/0:6,0:7:14.77:0,15,68	0/0:17,0:16:35.39:0,35,226	0/0:8,1:9:11.14:0,11,66	1/1:8,1:19:19.86:99,20,0	0/1:5,8:14:1.43:100,0,1	0/0:23,0:21:43.20:0,43,263	0/1:10,0:18:28.84:71,0,29	0/1:7,5:12:30.96:119,0,31	1/1:14,13:27:35.84:304,36,0	1/1:4,5:9:12.39:97,12,0	0/0:12,0:10:20.64:0,21,133	0/0:16,1:19:13.13:0,13,196	0/1:11,2:13:29.88:30,0,79	1/1:5,1:14:17.20:97,17,0	1/1:13,6:26:28.01:259,28,0	1/1:8,12:22:16.57:259,17,0	1/1:3,1:6:11.52:69,12,0
chr10	57776835	.	TGA	T	657.99	PASS	AB=0.952;AC=26;AF=0.565;AN=46;BaseQRankSum=0.138;DP=231;FS=6.123;HRun=0;HaplotypeScore=26.3775;InbreedingCoeff=0.2133;MQ=37.87;MQ0=19;MQRankSum=1.888;QD=6.04;ReadPosRankSum=1.421;VQSLOD=1.4361;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:4:6.01:0,6,74	./.	0/0:38,0:5:5.05:0,5,90	0/0:45,0:9:4.27:0,4,82	0/0:6,0:6:3.01:0,3,50	0/1:8,0:7:9.03:9,0,30	0/0:5,0:5:2.35:0,2,40	0/0:5,0:3:5.96:0,6,43	1/1:5,0:5:5.97:46,6,0	1/1:4,0:3:5.88:42,6,0	1/1:4,0:3:3:25,3,0	0/1:7,0:7:11.03:28,0,11	0/0:6,0:6:6.72:0,7,114	./.	1/1:4,2:6:18.03:197,18,0	0/1:7,0:6:2.31:2,0,14	./.	./.	1/1:4,0:3:5.97:45,6,0	0/1:6,4:10:7.29:29,0,7	1/1:14,0:11:14.91:111,15,0	1/1:4,0:2:3:25,3,0	1/1:4,0:4:3.47:26,3,0	0/1:12,0:12:33.81:34,0,74	1/1:6,0:5:5.99:48,6,0	1/1:5,4:8:11.98:108,12,0	0/1:5,0:5:15.50:32,0,16	./.
chr10	57777666	.	A	ATTTATTTGTTTG	1086.45	PASS	AB=1.000;AC=8;AF=0.148;AN=54;BaseQRankSum=-1.457;DP=383;FS=5.189;HRun=0;HaplotypeScore=137.7069;InbreedingCoeff=0.4751;MQ=57.03;MQ0=7;MQRankSum=-1.241;QD=18.41;ReadPosRankSum=-4.758;VQSLOD=0.6721;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:1,11:19:4.83:365,5,0	0/0:11,0:11:30.05:0,30,596	./.	0/0:5,0:2:3.01:0,3,61	1/1:0,10:14:26.95:662,27,0	0/0:17,0:17:51.07:0,51,1003	0/1:6,0:6:7.97:8,0,169	0/0:36,0:34:25.05:0,25,373	0/0:9,0:9:0.04:0,0,446	0/0:21,0:21:39.06:0,39,1028	0/0:19,0:19:14.96:0,15,710	0/0:10,0:10:29.42:0,29,461	0/0:6,0:6:18.06:0,18,479	0/0:9,0:9:27.06:0,27,636	0/1:12,0:12:4.02:4,0,300	1/1:2,0:8:6.02:176,6,0	0/0:16,0:16:10.34:0,10,563	0/0:6,0:17:25.33:0,25,172	0/0:22,0:20:2.11:0,2,372	0/0:20,0:20:21.95:0,22,796	0/0:11,0:11:21.35:0,21,410	0/0:2,0:2:3:0,3,25	0/0:3,0:3:9.03:0,9,295	0/0:5,0:5:15.03:0,15,348	0/0:33,0:33:53.47:0,53,1371	0/0:24,0:24:54.34:0,54,1160	0/0:16,0:16:10.48:0,10,721	0/0:7,0:7:21.02:0,21,426
chr10	57778742	.	T	TACAC	1498.51	PASS	AB=0.880;AC=29;AF=0.659;AN=44;BaseQRankSum=-1.416;DP=518;FS=1.335;HRun=0;HaplotypeScore=96.3734;InbreedingCoeff=0.5015;MQ=67.66;MQ0=9;MQRankSum=-0.187;QD=4.90;ReadPosRankSum=0.490;VQSLOD=1.6883;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:19,2:22:39.47:64,0,39	./.	./.	./.	1/1:16,0:14:8.98:87,9,0	0/0:15,0:16:8.97:0,9,91	0/0:13,0:13:3.01:0,3,46	1/1:28,0:27:0.47:1,0,0	1/1:11,0:14:3.18:13,3,0	1/1:15,0:15:11.95:145,12,0	1/1:20,0:20:6.02:117,6,0	0/0:14,0:14:0.47:0,0,1	./.	0/0:20,0:20:6.02:0,6,91	1/1:15,7:23:3.01:70,3,0	1/1:27,0:26:17.77:138,18,0	0/0:22,0:22:5.04:0,5,51	0/0:16,0:16:2.64:0,3,11	1/1:19,0:17:17.93:163,18,0	1/1:15,0:15:2.37:8,2,0	1/1:40,0:40:33.31:370,33,0	./.	./.	0/0:25,0:25:5.78:0,6,91	1/1:13,0:12:9.03:200,9,0	1/1:21,0:21:14.75:167,15,0	1/1:19,0:19:5.99:48,6,0	1/1:5,0:13:6.22:48,6,0
chr10	57780975	.	TTTAAA	T	3872.21	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=1.268;DP=470;FS=0.491;HRun=0;HaplotypeScore=103.3006;InbreedingCoeff=0.7901;MQ=71.69;MQ0=0;MQRankSum=-5.385;QD=39.51;ReadPosRankSum=1.150;VQSLOD=3.7262;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,22:24:57.20:1181,57,0	0/0:6,0:6:18.06:0,18,510	0/0:5,0:5:12.03:0,12,306	0/1:13,0:12:3.18:3,0,405	1/1:3,35:38:96.24:1880,96,0	0/0:25,0:25:75.26:0,75,2240	0/0:11,0:11:33.11:0,33,946	0/0:26,0:26:57.17:0,57,1553	0/0:15,0:15:42.14:0,42,1268	0/0:25,0:25:69.24:0,69,2117	0/0:34,0:34:99:0,99,2921	0/0:8,0:8:21.07:0,21,636	0/0:13,0:13:39.13:0,39,1155	0/0:11,0:11:33.11:0,33,971	0/0:20,0:20:60.21:0,60,1812	0/0:14,0:14:42.14:0,42,1287	0/0:17,0:17:45.15:0,45,1383	1/1:5,18:23:39.13:808,39,0	0/0:15,0:15:39.13:0,39,1182	0/0:19,0:19:48.15:0,48,1314	0/0:6,0:6:15.05:0,15,456	0/0:2,0:2:6.02:0,6,181	0/0:14,0:14:36.12:0,36,1037	0/0:5,0:5:3.01:0,3,92	0/0:22,0:22:66.23:0,66,1949	0/0:23,0:23:69.23:0,69,1971	0/0:30,0:30:90.29:0,90,2607	0/0:6,0:6:18.06:0,18,510
chr10	57782467	.	GTGTC	G	6184.81	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=4.866;DP=659;FS=7.340;HRun=0;HaplotypeScore=152.7377;InbreedingCoeff=0.9396;MQ=64.02;MQ0=2;MQRankSum=-3.227;QD=17.47;ReadPosRankSum=0.469;VQSLOD=3.6702;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:29:19.28:163,19,0	1/1:10,0:10:21.05:306,21,0	0/0:28,0:21:15.86:0,16,300	0/0:32,0:26:47.92:0,48,772	1/1:16,0:16:4.90:50,5,0	0/0:20,0:20:48.16:0,48,998	0/0:31,0:31:75.23:0,75,1451	1/1:37,0:37:48.16:743,48,0	1/1:9,1:10:21.05:278,21,0	1/1:19,0:19:36.12:562,36,0	1/1:23,1:24:29.95:402,30,0	0/0:25,0:25:66.20:0,66,1419	0/0:25,0:25:11.24:0,11,1195	0/0:31,1:32:16.93:0,17,1259	1/1:19,2:21:21.07:317,21,0	1/1:19,0:19:6.02:77,6,0	1/1:17,2:19:35.65:399,36,0	0/0:34,0:34:84.20:0,84,1105	1/1:16,2:18:21.06:308,21,0	1/1:23,2:25:38.65:542,39,0	1/1:7,23:30:6.02:97,6,0	0/0:17,0:17:27.09:0,27,618	0/0:21,0:21:45.14:0,45,834	0/0:40,0:40:96.30:0,96,2101	1/1:19,3:22:23.96:271,24,0	1/1:21,0:20:39.12:584,39,0	1/1:24,2:26:54:772,54,0	1/1:7,1:8:24:316,24,0
chr10	57782491	.	CTGCCTGT	C	2248.40	PASS	AB=0.857;AC=25;AF=0.446;AN=56;BaseQRankSum=10.792;DP=660;FS=0.000;HRun=0;HaplotypeScore=207.8366;InbreedingCoeff=0.5863;MQ=51.21;MQ0=10;MQRankSum=-2.553;QD=7.75;ReadPosRankSum=1.860;VQSLOD=2.3329;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:39.67:0,40,494	1/1:7,3:10:13.47:129,13,0	0/0:23,0:11:24.03:0,24,427	0/0:42,0:25:62:0,62,1117	0/0:16,0:16:19.69:0,20,206	0/0:23,0:22:66.23:0,66,2029	0/0:37,0:37:99:0,108,3048	1/1:25,0:23:15.92:72,16,0	1/1:10,3:13:17.33:128,17,0	1/1:14,7:21:7.17:375,7,0	1/1:17,7:24:0.94:44,1,0	0/0:28,0:28:80.08:0,80,2588	0/0:28,0:28:75.81:0,76,2518	0/0:27,0:27:81.28:0,81,2507	1/1:14,4:18:16.09:163,16,0	0/1:21,0:21:30.97:31,0,73	0/1:19,3:22:22.48:52,0,22	0/0:32,0:31:87.27:0,87,1770	0/1:17,1:18:99:100,0,196	1/1:16,7:23:9.06:164,9,0	1/1:24,0:24:6.01:63,6,0	0/0:15,0:15:42.14:0,42,1247	0/0:23,0:23:63.22:0,63,1753	0/0:45,0:45:99:0,132,4277	0/1:8,7:15:2.01:101,0,2	0/1:17,7:23:30.57:375,0,31	1/1:16,8:24:29.68:483,30,0	1/1:4,4:8:13.55:172,14,0
chr10	57782494	.	CCTGTCTGT	C	2293.74	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=9.316;DP=683;FS=15.248;HRun=0;HaplotypeScore=220.3612;InbreedingCoeff=0.5336;MQ=50.17;MQ0=14;MQRankSum=-6.364;QD=6.53;ReadPosRankSum=3.715;VQSLOD=1.4248;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:32,0:32:10.14:109,10,0	1/1:9,0:9:2.76:115,3,0	0/0:25,0:11:11.89:0,12,119	0/0:41,0:24:24.27:0,24,325	1/1:21,0:21:1.57:23,2,0	0/0:24,0:23:54.16:0,54,1551	0/0:37,0:37:93.24:0,93,2293	0/1:24,0:22:2.87:3,0,4	1/1:13,0:13:9.87:127,10,0	0/1:21,0:21:7.73:368,0,8	1/1:22,0:22:2.83:22,3,0	0/0:30,0:30:73.08:0,73,2310	0/0:27,0:27:69.24:0,69,2180	0/0:28,0:28:66.20:0,66,2066	1/1:19,0:19:10.47:146,10,0	1/1:5,16:21:5.95:96,6,0	0/1:25,0:25:13.50:68,0,13	0/0:31,0:30:33.51:0,34,781	0/1:18,0:17:16.60:106,0,17	1/1:23,0:23:11.52:123,12,0	1/1:25,0:25:5.96:43,6,0	0/0:16,0:16:42.13:0,42,1025	0/0:27,0:27:59.69:0,60,1261	0/0:45,0:45:99:0,114,3701	1/1:17,0:17:5.79:113,6,0	0/1:26,0:25:35.96:370,0,36	1/1:27,0:27:25.73:476,26,0	1/1:8,0:8:9.03:179,9,0
chr10	57782511	.	CTGTCTG	C	1160.38	PASS	AB=0.976;AC=19;AF=0.339;AN=56;BaseQRankSum=8.451;DP=731;FS=25.335;HRun=0;HaplotypeScore=226.3870;InbreedingCoeff=-0.2346;MQ=50.47;MQ0=17;MQRankSum=-5.607;QD=3.09;ReadPosRankSum=2.652;VQSLOD=1.2423;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:27,8:35:23.85:203,0,24	1/1:7,0:7:6.01:58,6,0	0/0:35,0:15:38.16:0,38,452	0/0:54,0:25:62.98:0,63,983	0/1:21,4:25:60.18:60,0,66	0/0:26,0:25:69.22:0,69,1885	0/0:43,0:43:99:0,123,3016	0/0:19,0:17:42.47:0,42,381	0/1:13,0:13:17.04:54,0,17	0/1:22,0:22:99:108,0,226	0/1:23,0:23:10.28:10,0,53	0/0:31,0:31:88.18:0,88,2601	0/0:26,0:26:78.27:0,78,2320	0/0:29,0:29:87.28:0,87,2426	0/1:21,0:21:61.40:61,0,89	0/1:20,0:20:14.67:33,0,15	0/1:24,0:24:25.72:26,0,90	0/1:23,0:23:54.33:54,0,118	0/1:21,0:20:52:52,0,245	0/1:22,0:22:41.29:75,0,41	1/1:31,0:31:0.78:33,1,0	0/0:20,0:20:57.19:0,57,1419	0/0:24,0:24:69.18:0,69,1630	0/0:49,0:49:99:0,141,4153	0/1:26,0:27:49.52:50,0,185	0/1:33,0:32:99:111,0,240	0/1:21,0:21:5.84:268,0,6	0/1:7,0:7:29.92:66,0,30
chr10	57782515	.	CTG	C	1893.32	PASS	AB=0.979;AC=22;AF=0.393;AN=56;BaseQRankSum=10.515;DP=746;FS=44.799;HRun=0;HaplotypeScore=196.6607;InbreedingCoeff=-0.0307;MQ=50.68;MQ0=17;MQRankSum=-8.987;QD=4.69;ReadPosRankSum=3.561;VQSLOD=1.0916;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:27,9:36:2.40:130,2,0	1/1:8,0:8:5.75:31,6,0	0/0:38,0:16:37.69:0,38,423	0/0:57,0:25:65.19:0,65,858	0/1:14,10:24:17.23:22,0,17	0/0:26,0:25:69.18:0,69,1147	0/0:39,0:39:99:0,108,1820	0/1:22,0:20:18.79:19,0,201	0/1:15,0:15:17.62:24,0,18	0/1:25,0:25:35.79:199,0,36	0/1:24,0:24:11.65:12,0,24	0/0:32,0:32:90.72:0,91,1496	0/0:27,0:27:81.21:0,81,1345	0/0:31,0:31:93.23:0,93,1518	0/1:21,0:21:19.17:52,0,19	0/1:19,0:19:2.13:2,0,33	0/1:24,0:24:12.17:12,0,50	1/1:16,7:23:53.84:787,54,0	0/1:21,0:20:99:147,0,184	0/1:23,0:23:23.08:74,0,23	0/1:30,0:30:3.57:40,0,4	0/0:21,0:21:60.11:0,60,907	0/0:22,0:22:60.13:0,60,1006	0/0:49,0:49:99:0,141,2459	0/1:29,0:29:35.85:36,0,68	0/1:33,0:32:36.79:258,0,37	1/1:20,0:20:18.04:199,18,0	0/1:7,0:7:10:25,0,10
chr10	57782523	.	C	CGTGTG	2959.31	PASS	AB=0.933;AC=18;AF=0.321;AN=56;BaseQRankSum=10.439;DP=737;FS=3.865;HRun=0;HaplotypeScore=221.4171;InbreedingCoeff=0.0135;MQ=50.11;MQ0=16;MQRankSum=-9.797;QD=9.08;ReadPosRankSum=0.964;VQSLOD=2.8266;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:35,0:34:27.94:70,0,28	1/1:8,0:8:2.37:70,2,0	0/0:46,0:19:43.64:0,44,701	0/0:60,0:29:78.17:0,78,1462	1/1:25,0:25:5.31:24,5,0	0/0:24,0:24:63.22:0,63,1467	0/0:39,0:39:99:0,111,2577	0/1:24,0:23:49.37:49,0,398	0/1:13,2:15:12.93:13,0,25	0/1:22,4:26:99:567,0,248	0/0:20,2:23:7.57:0,8,20	0/0:32,0:32:75.61:0,76,1902	0/0:25,0:25:75.24:0,75,1698	0/0:29,0:29:87.30:0,87,2024	0/1:17,3:20:2.92:80,0,3	0/0:17,0:17:6.02:0,6,131	1/1:22,1:23:12.16:311,12,0	0/1:23,0:22:74.72:75,0,500	0/1:16,1:17:99:420,0,353	0/1:21,1:22:9.41:13,0,9	0/0:23,0:23:1.60:0,2,5	0/0:18,0:18:54.19:0,54,1215	0/0:21,0:21:57.18:0,57,1283	0/0:53,0:53:99:0,156,3444	0/1:27,3:30:14.71:94,0,15	0/1:27,4:32:69:1059,0,69	0/1:18,1:19:13.11:153,0,13	0/1:6,0:6:3.50:126,0,4
chr10	57782527	.	C	CTCGTGTGTGT	9245.89	PASS	AB=0.675;AC=25;AF=0.446;AN=56;BaseQRankSum=6.929;DP=803;FS=3.925;HRun=0;HaplotypeScore=294.2620;InbreedingCoeff=0.3820;MQ=49.90;MQ0=16;MQRankSum=-12.426;QD=22.12;ReadPosRankSum=-0.348;VQSLOD=3.7605;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:24,12:40:15.48:410,15,0	0/1:4,0:9:18.78:116,0,19	0/0:46,0:19:44.05:0,44,839	0/0:59,0:28:59.85:0,60,1347	0/1:13,10:27:0.43:0,0,1	0/0:25,0:25:66.01:0,66,1738	0/0:40,0:40:99:0,114,3065	0/1:20,0:39:96.77:1880,0,97	0/1:7,0:18:14.18:53,0,14	0/1:20,0:33:99:1508,0,160	0/0:14,0:26:1.84:0,2,5	0/0:29,0:29:62.84:0,63,1929	0/0:23,0:23:69.23:0,69,1857	0/0:30,0:30:90.31:0,90,2680	1/1:11,0:26:12.03:206,12,0	0/0:14,0:14:6.02:0,6,160	1/1:7,0:28:23.97:658,24,0	1/1:17,3:24:5.63:945,6,0	0/1:13,0:20:99:768,0,179	1/1:11,0:26:2.92:37,3,0	1/1:9,0:27:0.28:1,0,0	0/0:18,0:18:54.15:0,54,1625	0/0:20,0:21:63.21:0,63,1919	0/0:54,0:54:99:0,137,4570	1/1:15,0:34:5.10:124,5,0	0/1:19,0:37:74.01:2030,0,74	1/1:13,0:21:4.14:230,4,0	1/1:5,0:7:9.74:281,10,0
chr10	57788865	.	T	TTG	3509.49	PASS	AB=0.844;AC=35;AF=0.648;AN=54;BaseQRankSum=-4.526;DP=344;FS=4.517;HRun=0;HaplotypeScore=60.7590;InbreedingCoeff=0.4771;MQ=58.57;MQ0=11;MQRankSum=0.016;QD=12.58;ReadPosRankSum=-0.007;VQSLOD=2.4864;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:16:3.47:27,3,0	1/1:2,7:9:15.05:230,15,0	1/1:10,0:3:0.89:2,1,0	0/1:19,0:7:14.62:15,0,28	1/1:14,0:14:2.77:14,3,0	0/0:11,0:13:23.64:0,24,229	0/0:10,0:9:14.98:0,15,136	1/1:19,3:22:6.01:71,6,0	1/1:1,5:6:12.04:181,12,0	1/1:5,8:14:17.92:247,18,0	0/1:8,4:12:36.90:37,0,52	0/0:9,0:9:15:0,15,158	0/0:6,0:6:18.05:0,18,204	0/0:6,0:6:9.01:0,9,92	0/1:7,2:9:14.40:83,0,14	0/1:9,0:9:24.81:42,0,25	1/1:7,15:20:45.13:651,45,0	1/1:16,0:15:19.57:139,20,0	1/1:13,7:19:25.22:294,25,0	1/1:4,5:9:11.20:118,11,0	1/1:3,3:5:6.02:92,6,0	./.	0/0:10,0:10:15.01:0,15,151	0/0:10,0:10:18.05:0,18,203	0/1:6,6:13:12.84:255,0,13	1/1:9,10:18:30.05:386,30,0	1/1:4,13:17:20.81:321,21,0	1/1:5,8:13:21.07:306,21,0
chr10	57789529	.	AG	A	17718.08	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=17.957;DP=780;FS=1.890;HRun=2;HaplotypeScore=114.1808;InbreedingCoeff=0.9996;MQ=72.92;MQ0=1;MQRankSum=-4.557;QD=36.46;ReadPosRankSum=1.142;VQSLOD=4.6383;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,35:35:99:1286,99,0	1/1:0,10:10:30.10:390,30,0	0/0:34,0:33:61.51:0,62,1332	0/0:25,0:24:57.19:0,57,826	1/1:1,26:27:72.23:935,72,0	0/0:25,0:25:72.24:0,72,1077	0/0:31,0:31:90.29:0,90,1321	1/1:1,36:37:99:1389,108,0	1/1:4,24:28:84.27:1090,84,0	1/1:4,25:29:78.25:1010,78,0	1/1:0,15:15:42.14:545,42,0	0/0:43,0:43:99:0,129,1933	0/0:33,0:33:96.33:0,96,1436	0/0:32,0:32:96.32:0,96,1427	1/1:2,32:34:99:1295,102,0	1/1:0,38:38:99:1402,108,0	1/1:2,29:31:90.28:1153,90,0	1/1:0,16:16:45.15:584,45,0	1/1:1,22:23:60.18:764,60,0	1/1:2,17:19:54.18:701,54,0	1/1:4,45:49:99:1753,135,0	0/0:20,0:20:60.19:0,60,879	0/0:26,0:26:78.25:0,78,1147	0/0:25,0:25:75.25:0,75,1124	1/1:1,23:24:66.21:857,66,0	1/1:0,35:35:99:1363,105,0	1/1:4,20:24:72.19:890,72,0	1/1:3,9:12:24.08:312,24,0
chr10	57789606	.	TA	T	12680.36	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=18.409;DP=788;FS=1.460;HRun=2;HaplotypeScore=110.2089;InbreedingCoeff=0.9973;MQ=88.26;MQ0=0;MQRankSum=-3.894;QD=36.54;ReadPosRankSum=2.295;VQSLOD=4.8197;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:78.26:0,78,1167	1/1:2,5:7:21.05:254,21,0	0/0:30,0:30:87.26:0,87,1238	0/0:29,0:29:84.27:0,84,1224	0/0:29,0:29:84.25:0,84,1218	0/0:29,0:29:81.25:0,81,1176	0/0:30,0:30:90.30:0,90,1328	1/1:0,28:28:84.25:1074,84,0	1/1:1,26:27:72.23:934,72,0	1/1:4,24:28:78.24:998,78,0	1/1:1,16:17:44.69:582,45,0	0/0:38,0:38:99:0,111,1605	0/0:38,0:38:99:0,108,1596	0/0:38,0:38:99:0,114,1673	1/1:1,37:38:99:1427,111,0	0/0:54,1:55:99:0,121,2258	1/1:1,19:20:57.16:722,57,0	0/0:17,0:17:45.13:0,45,645	1/1:2,12:14:36.10:452,36,0	1/1:0,24:24:69.22:895,69,0	1/1:2,48:50:99:1911,150,0	0/0:25,0:25:75.24:0,75,1099	0/0:23,0:23:66.22:0,66,971	0/0:33,0:33:99:0,99,1482	1/1:0,23:23:63.20:818,63,0	1/1:2,20:22:66.20:843,66,0	1/1:2,42:44:99:1577,123,0	1/1:1,4:5:15.05:193,15,0
chr10	57790062	.	A	ACTGTT	2562.95	PASS	AB=1.000;AC=8;AF=0.143;AN=56;BaseQRankSum=-0.566;DP=748;FS=2.683;HRun=0;HaplotypeScore=160.7644;InbreedingCoeff=0.7027;MQ=84.84;MQ0=4;MQRankSum=-0.682;QD=13.85;ReadPosRankSum=-3.649;VQSLOD=2.3546;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,26:43:48.16:1319,48,0	0/0:13,0:13:18.05:0,18,304	0/0:49,0:38:17.59:0,18,307	0/1:77,0:60:11.20:11,0,440	1/1:4,12:17:39.13:787,39,0	0/0:17,0:17:42.13:0,42,732	0/0:20,0:20:36.12:0,36,652	0/0:25,0:25:33.09:0,33,509	0/0:26,0:26:69.21:0,69,1202	0/0:30,0:30:57.20:0,57,1054	0/0:10,0:10:24.07:0,24,401	0/0:25,0:25:51.17:0,51,920	0/0:26,0:26:48.13:0,48,853	0/0:31,0:31:75.25:0,75,1319	0/0:30,0:30:81.28:0,81,1473	0/0:35,0:35:66.19:0,66,1129	0/0:35,0:35:72.23:0,72,1276	1/1:14,0:14:33.09:586,33,0	0/0:14,0:14:21.05:0,21,344	0/0:14,0:14:36.04:0,36,594	0/0:42,0:42:99:0,102,1783	0/0:13,0:13:12.03:0,12,192	0/0:16,0:16:42.14:0,42,764	0/0:27,0:27:60.16:0,60,1074	0/0:30,0:30:69.20:0,69,1214	0/1:34,0:34:13.29:13,0,1199	0/0:29,0:28:60.15:0,60,1006	0/0:4,0:4:12.04:0,12,222
chr10	57790089	.	TTGTC	T	276.50	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=7.359;DP=820;FS=14.168;HRun=0;HaplotypeScore=164.8009;InbreedingCoeff=0.6502;MQ=83.39;MQ0=4;MQRankSum=1.552;QD=8.92;ReadPosRankSum=-1.498;VQSLOD=2.1146;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:73.40:0,73,1823	0/0:8,0:8:15.01:0,15,224	0/0:57,0:36:33.22:0,33,561	0/0:88,0:71:29.13:0,29,885	0/0:24,0:24:63.22:0,63,1491	0/0:20,0:20:54.17:0,54,1299	0/0:21,0:21:60.14:0,60,1248	0/0:28,0:28:63.14:0,63,1095	0/0:35,0:35:87.23:0,87,2058	0/0:30,0:30:69.22:0,69,1566	0/0:17,0:17:45.14:0,45,1052	0/0:23,0:23:63.15:0,63,1322	0/0:24,0:24:63.17:0,63,1402	0/0:34,0:34:69.20:0,69,1562	0/0:39,0:39:99:0,105,2444	0/0:31,0:31:78.23:0,78,1786	0/0:36,0:36:90.15:0,90,1974	1/1:11,5:16:32.90:368,33,0	0/0:19,0:19:39.06:0,39,623	0/0:22,0:22:54.19:0,54,1318	0/0:47,0:47:99:0,117,2550	0/1:15,0:15:12.03:12,0,862	0/0:21,0:21:51.13:0,51,1111	0/0:30,0:30:81.25:0,81,1892	0/0:29,0:29:81.20:0,81,1771	0/0:30,0:30:81.22:0,81,1685	0/0:29,0:27:75.24:0,75,1783	0/0:6,0:6:18.06:0,18,449
chr10	57790093	.	C	CT	366.16	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=9.192;DP=809;FS=10.398;HRun=1;HaplotypeScore=116.5697;InbreedingCoeff=0.9480;MQ=81.86;MQ0=4;MQRankSum=2.786;QD=21.54;ReadPosRankSum=-1.762;VQSLOD=2.3507;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,1:41:11.07:0,11,875	0/0:8,0:8:21.07:0,21,272	0/0:51,0:34:35.15:0,35,742	0/0:82,1:71:33.65:0,34,1053	0/0:26,0:26:49.26:0,49,811	0/0:22,0:22:57.18:0,57,739	0/0:21,0:21:60.19:0,60,779	0/0:25,0:25:69.20:0,69,870	0/0:34,0:34:99:0,99,1283	0/0:33,0:33:96.30:0,96,1221	0/0:16,0:16:45.15:0,45,584	0/0:23,0:23:66.21:0,66,857	0/0:24,0:24:69.22:0,69,894	0/0:32,0:32:93.30:0,93,1207	0/0:39,0:39:99:0,111,1434	0/0:30,0:30:90.29:0,90,1166	0/0:35,0:35:99:0,105,1363	1/1:5,12:17:39.58:461,40,0	0/0:16,0:16:48.16:0,48,622	0/0:21,0:21:60.20:0,60,779	0/0:43,0:43:99:0,129,1655	0/0:14,1:15:20.47:0,20,471	0/0:20,0:20:60.18:0,60,764	0/0:31,0:31:89.92:0,90,1153	0/0:30,0:30:90.28:0,90,1155	0/0:31,1:32:88.97:0,89,1165	0/0:29,0:28:84.27:0,84,1089	0/0:6,0:6:18.06:0,18,234
chr10	57790996	.	AT	A	12771.39	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=13.770;DP=555;FS=30.322;HRun=4;HaplotypeScore=91.1272;InbreedingCoeff=0.9993;MQ=67.63;MQ0=0;MQRankSum=-5.027;QD=33.09;ReadPosRankSum=1.887;VQSLOD=2.7606;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,37:38:99:1260,105,0	1/1:0,10:10:30.05:344,30,0	0/0:14,0:14:39.80:0,40,490	0/0:12,0:12:30.06:0,30,380	1/1:0,33:33:96.29:1152,96,0	0/0:22,0:22:66.21:0,66,907	0/0:30,0:30:90.28:0,90,1240	1/1:3,39:42:99:1330,111,0	1/1:2,21:23:63.19:755,63,0	1/1:2,11:13:36.08:417,36,0	1/1:2,16:18:54.14:624,54,0	0/0:15,0:15:45.15:0,45,630	0/0:13,0:13:39.13:0,39,546	0/0:21,0:21:63.20:0,63,865	1/1:1,23:24:72.21:851,72,0	1/1:1,9:10:27.08:324,27,0	1/1:6,26:32:84.21:973,84,0	1/1:1,14:15:42.13:504,42,0	1/1:2,15:17:48.14:565,48,0	1/1:2,22:24:69.18:803,69,0	1/1:3,8:11:24.06:275,24,0	0/0:14,0:14:39.13:0,39,546	0/0:16,0:16:42.14:0,42,588	0/0:12,0:12:36.09:0,36,468	1/1:3,19:22:63.19:755,63,0	1/1:4,14:18:48.13:557,48,0	1/1:3,20:23:69.20:815,69,0	1/1:0,13:13:39.12:467,39,0
chr10	57791042	.	C	CT	12612.56	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=13.784;DP=601;FS=6.272;HRun=0;HaplotypeScore=107.5477;InbreedingCoeff=0.9987;MQ=62.82;MQ0=1;MQRankSum=-9.280;QD=42.90;ReadPosRankSum=-0.376;VQSLOD=4.1978;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:96.28:0,96,1290	1/1:1,5:6:18.05:251,18,0	0/0:23,0:18:47.75:0,48,639	0/0:9,0:9:27.08:0,27,348	0/0:37,0:37:99:0,111,1536	0/0:25,0:25:72.24:0,72,1007	0/0:26,0:26:78.26:0,78,1090	1/1:2,21:23:69.19:998,69,0	1/1:0,21:21:63.21:944,63,0	1/1:0,24:24:72.23:1063,72,0	1/1:0,20:20:60.20:896,60,0	0/0:26,0:26:78.26:0,78,1090	0/0:17,0:17:48.16:0,48,671	0/0:23,0:23:69.22:0,69,949	1/1:2,24:26:72.24:1077,72,0	0/0:15,0:15:45.15:0,45,629	1/1:1,31:32:90.29:1329,90,0	0/0:17,0:17:51.17:0,51,713	1/1:0,18:18:54.18:812,54,0	1/1:2,24:26:75.24:1108,75,0	1/1:1,19:20:48.16:719,48,0	0/0:15,0:15:45.15:0,45,629	0/0:24,0:24:72.23:0,72,989	0/0:16,0:16:48.15:0,48,655	1/1:0,16:16:48.16:720,48,0	1/1:1,19:20:60.19:879,60,0	1/1:1,26:28:81.27:1205,81,0	1/1:0,14:14:42.14:612,42,0
chr10	57793464	.	CT	C	1709.01	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=10.239;DP=419;FS=0.000;HRun=8;HaplotypeScore=37.1462;InbreedingCoeff=0.8637;MQ=60.31;MQ0=19;MQRankSum=0.724;QD=20.11;ReadPosRankSum=2.634;VQSLOD=2.9895;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,31:31:57.09:550,57,0	0/0:12,0:12:33.10:0,33,398	0/0:13,0:5:8.84:0,9,72	0/0:6,0:1:2.74:0,3,12	1/1:3,26:29:75.03:706,75,0	0/0:19,0:19:48.03:0,48,533	0/0:5,0:4:6.02:0,6,72	0/0:31,0:23:69.13:0,69,795	0/0:9,0:7:18.03:0,18,194	0/0:21,0:21:57.14:0,57,657	0/0:14,0:13:33.09:0,33,387	0/0:13,0:12:27.05:0,27,291	0/0:4,0:4:9.03:0,9,109	0/0:13,0:12:33.10:0,33,397	0/0:9,0:8:24.07:0,24,290	1/1:2,4:6:9.01:87,9,0	0/0:24,0:24:63.13:0,63,711	1/1:1,18:19:54.09:521,54,0	0/0:23,0:20:48.13:0,48,566	0/0:17,0:17:48.15:0,48,579	0/0:9,0:9:24.06:0,24,279	0/0:5,0:5:12.04:0,12,145	0/0:11,0:11:30.07:0,30,342	0/0:4,0:4:12.04:0,12,145	0/0:14,0:14:37.35:0,37,427	0/0:14,0:13:39.11:0,39,462	0/0:25,0:24:72.16:0,72,819	0/0:19,0:17:51.16:0,51,616
chr10	57794679	.	GGT	G	1237.25	PASS	AB=0.944;AC=29;AF=0.580;AN=50;BaseQRankSum=6.556;DP=569;FS=3.746;HRun=0;HaplotypeScore=107.9908;InbreedingCoeff=0.4741;MQ=62.94;MQ0=10;MQRankSum=-1.472;QD=3.61;ReadPosRankSum=1.415;VQSLOD=2.2292;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:14.98:0,15,126	1/1:3,2:5:3.01:32,3,0	./.	./.	0/0:32,0:31:17.93:0,18,155	0/1:20,0:20:34.34:34,0,67	0/1:26,0:25:0.63:1,0,161	./.	1/1:16,4:23:29.80:265,30,0	1/1:24,1:27:14.34:113,14,0	1/1:14,4:19:17.74:150,18,0	0/0:21,0:21:26.98:0,27,312	0/1:22,0:21:0.31:0,0,234	0/0:22,0:23:12.93:0,13,173	1/1:17,5:24:25.56:232,26,0	0/1:24,0:23:33.02:33,0,70	1/1:12,2:13:17.93:151,18,0	0/0:14,0:14:15.39:0,15,138	1/1:13,0:13:8.96:68,9,0	1/1:9,3:14:8.98:75,9,0	0/1:19,1:17:0:0,0,0	0/0:11,0:11:15.02:0,15,182	0/1:15,0:14:0.91:1,0,72	0/0:30,0:31:5.65:0,6,275	0/1:10,10:21:21.07:62,0,21	1/1:23,0:24:17.20:112,17,0	1/1:14,0:26:4.56:55,5,0	1/1:6,0:4:2.99:24,3,0
chr10	57794734	.	G	GAC	2002.93	PASS	AB=0.930;AC=29;AF=0.558;AN=52;BaseQRankSum=3.368;DP=618;FS=36.456;HRun=0;HaplotypeScore=157.5798;InbreedingCoeff=0.1242;MQ=43.10;MQ0=26;MQRankSum=0.541;QD=4.48;ReadPosRankSum=2.021;VQSLOD=1.3738;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:29:4.21:0,4,13	1/1:8,0:8:2.17:12,2,0	./.	./.	0/0:29,0:27:6.84:0,7,61	1/1:27,0:27:35.18:448,35,0	0/1:22,0:18:60.21:60,0,85	0/1:44,0:38:97.36:106,0,97	1/1:23,0:23:16.94:87,17,0	1/1:36,0:35:5.32:389,5,0	1/1:27,0:24:3.30:10,3,0	0/1:10,8:19:21.19:21,0,199	0/1:23,0:21:99:135,0,136	0/0:12,7:18:5.85:0,6,59	1/1:29,0:27:13.58:73,14,0	0/0:17,0:16:11.80:0,12,99	0/1:15,0:14:4.67:5,0,18	0/0:13,0:11:2.29:0,2,98	0/1:13,0:12:19.83:73,0,20	1/1:29,0:24:9.80:73,10,0	1/1:25,0:19:10.66:95,11,0	0/1:12,8:20:35.01:35,0,73	0/0:9,15:22:5.21:0,5,30	0/0:13,1:33:12.04:0,12,174	0/1:31,0:30:32.65:160,0,33	0/1:19,0:19:4.91:149,0,5	1/1:30,0:29:27.28:232,27,0	1/1:5,0:5:0.47:1,0,0
chr10	57794736	.	GAC	G	441.66	PASS	AB=0.991;AC=17;AF=0.327;AN=52;BaseQRankSum=-0.136;DP=608;FS=22.893;HRun=0;HaplotypeScore=156.0292;InbreedingCoeff=-0.0993;MQ=43.34;MQ0=25;MQRankSum=-4.744;QD=1.31;ReadPosRankSum=3.097;VQSLOD=1.1053;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:34,0:28:12.12:61,0,12	0/1:8,0:8:4.66:5,0,5	./.	./.	0/1:29,0:27:12.31:12,0,20	0/0:25,0:25:39.90:0,40,461	0/0:23,0:19:20.69:0,21,198	0/1:42,0:36:53.52:172,0,54	0/1:24,0:24:12.61:27,0,13	0/1:36,0:35:51.01:51,0,357	0/1:28,0:25:1.61:2,0,18	0/0:18,0:18:17.77:0,18,215	0/0:23,0:22:16.37:0,16,186	0/0:18,0:17:5.97:0,6,79	0/1:29,0:27:11.66:25,0,12	1/1:13,4:16:12.95:103,13,0	0/1:14,1:14:27.79:45,0,28	0/1:12,0:10:25.67:26,0,57	0/1:13,0:12:3.73:4,0,94	0/0:30,0:25:4.70:0,5,83	0/0:24,1:19:21.02:0,21,248	0/0:22,0:20:12:0,12,115	0/0:25,0:23:8.53:0,9,98	0/0:32,0:31:9.50:0,10,143	0/0:31,0:30:22.53:0,23,244	0/1:16,1:17:27.28:27,0,208	0/1:27,0:26:4.73:5,0,304	1/1:5,0:5:5.67:28,6,0
chr10	57794744	.	G	GACAG	2727.08	PASS	AB=1.000;AC=37;AF=0.712;AN=52;BaseQRankSum=-2.461;DP=592;FS=1.836;HRun=0;HaplotypeScore=157.4110;InbreedingCoeff=0.2800;MQ=44.42;MQ0=26;MQRankSum=4.735;QD=5.67;ReadPosRankSum=-3.818;VQSLOD=1.4373;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:24:5.69:0,6,43	0/1:7,0:7:0:0,0,0	./.	./.	0/0:30,0:28:2.73:0,3,28	1/1:26,0:26:33.07:616,33,0	1/1:21,0:17:6:53,6,0	0/1:43,0:36:19.71:198,0,20	1/1:24,0:24:3.01:53,3,0	1/1:39,0:38:28.74:597,29,0	0/0:27,0:23:0.35:0,0,0	1/1:19,0:19:5.85:81,6,0	1/1:11,7:20:17.91:168,18,0	1/1:16,0:15:2.68:12,3,0	1/1:24,0:22:2.84:54,3,0	0/1:17,0:16:8.37:8,0,10	0/0:16,0:15:5.19:0,5,37	0/0:10,0:9:10.93:0,11,85	0/1:18,0:17:8.36:163,0,8	1/1:28,0:23:8.97:70,9,0	0/1:24,0:18:21.72:79,0,22	1/1:19,0:17:9:80,9,0	1/1:27,0:25:3.01:42,3,0	1/1:29,0:28:3.01:36,3,0	1/1:30,0:29:20.97:173,21,0	1/1:16,0:16:7.50:175,8,0	1/1:26,0:25:11.12:206,11,0	1/1:7,0:7:2.44:6,2,0
chr10	57794752	.	GAC	G	150.68	PASS	AB=0.811;AC=7;AF=0.130;AN=54;BaseQRankSum=0.592;DP=594;FS=2.992;HRun=0;HaplotypeScore=146.0661;InbreedingCoeff=0.1370;MQ=45.80;MQ0=21;MQRankSum=-1.718;QD=1.44;ReadPosRankSum=0.297;VQSLOD=2.5748;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:17,15:28:42.65:43,0,51	0/1:7,0:7:1.18:1,0,6	0/0:2,0:1:2.80:0,3,13	./.	0/1:8,23:29:6.02:52,0,6	0/0:26,0:26:51.17:0,51,784	0/0:25,0:20:33.09:0,33,526	0/0:40,0:34:51.23:0,51,654	0/0:24,0:24:9.41:0,9,76	0/0:39,0:38:96.80:0,97,1065	0/0:27,0:23:17.86:0,18,70	0/0:19,0:19:24.08:0,24,365	0/0:21,0:20:33:0,33,495	0/0:15,0:14:5.99:0,6,104	0/0:28,0:26:7.83:0,8,64	1/1:11,1:11:4.37:30,4,0	0/1:15,0:14:5.36:5,0,109	0/1:6,2:8:59.89:134,0,60	0/0:21,0:20:45.62:0,46,520	0/0:26,0:22:17.04:0,17,175	0/0:25,0:21:32.91:0,33,337	0/0:19,0:17:7.83:0,8,121	0/0:25,0:24:17.59:0,18,273	0/0:29,0:28:11.40:0,11,150	0/0:28,2:29:1.10:0,1,367	0/0:15,0:15:41.95:0,42,479	0/0:25,0:25:53.61:0,54,541	0/0:7,0:7:5.99:0,6,69
chr10	57794754	.	C	CAGAG	5038.25	PASS	AB=0.904;AC=31;AF=0.574;AN=54;BaseQRankSum=1.181;DP=600;FS=10.438;HRun=0;HaplotypeScore=136.5776;InbreedingCoeff=0.1402;MQ=46.22;MQ0=21;MQRankSum=-0.757;QD=10.77;ReadPosRankSum=4.392;VQSLOD=3.4038;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:26:23.53:0,24,193	0/1:1,5:6:0:0,0,0	0/0:3,0:2:2.80:0,3,13	./.	0/0:31,0:29:14.68:0,15,118	0/1:26,0:26:93.85:302,0,94	0/0:25,0:20:22.56:0,23,208	0/1:39,0:33:38.19:578,0,38	1/1:4,21:26:2.98:71,3,0	1/1:8,31:38:45.82:1284,46,0	0/0:7,19:22:0.33:0,0,0	0/1:20,0:20:20.51:21,0,110	0/1:22,0:21:17.90:18,0,85	0/0:15,0:14:5.61:0,6,36	1/1:7,21:27:2.84:72,3,0	0/1:8,0:11:20.38:20,0,59	0/1:8,9:16:9.74:10,0,32	0/1:8,0:8:5:5,0,89	1/1:4,17:21:12.16:519,12,0	1/1:27,0:23:17.20:217,17,0	0/1:26,0:22:44.26:289,0,44	1/1:18,0:16:2.87:15,3,0	0/1:24,0:23:0.04:0,0,101	0/1:29,0:28:5.01:5,0,58	1/1:30,0:29:43.75:552,44,0	1/1:16,0:16:21.90:435,22,0	1/1:24,1:25:37.14:594,37,0	1/1:1,6:7:5.80:32,6,0
chr10	57794764	.	CAG	C	468.75	PASS	AB=0.740;AC=5;AF=0.089;AN=56;BaseQRankSum=1.804;DP=625;FS=15.084;HRun=0;HaplotypeScore=144.9533;InbreedingCoeff=0.2253;MQ=50.72;MQ0=17;MQRankSum=-1.052;QD=5.65;ReadPosRankSum=-0.509;VQSLOD=2.5273;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:16,11:24:79.61:224,0,80	0/0:8,0:8:9.97:0,10,118	0/0:10,0:7:18.36:0,18,277	0/0:7,0:5:12.03:0,12,159	0/1:26,6:30:34.85:188,0,35	0/0:27,3:30:60.19:0,60,1008	0/0:24,1:22:45.15:0,45,786	0/0:39,0:33:68.72:0,69,1020	0/0:30,0:30:26.58:0,27,391	0/0:37,0:36:79.31:0,79,1298	0/0:26,0:23:23.61:0,24,132	0/0:18,1:19:27.08:0,27,436	0/0:18,1:18:22.87:0,23,508	0/0:10,4:14:6.02:0,6,106	0/0:27,0:25:7.84:0,8,111	1/1:6,6:11:12.91:150,13,0	0/0:15,0:14:4.38:0,4,207	0/1:6,6:12:26.42:26,0,135	0/0:22,0:21:52.51:0,53,667	0/0:26,0:22:20.76:0,21,344	0/0:28,0:25:51.17:0,51,866	0/0:19,0:17:5.85:0,6,106	0/0:25,0:25:20.59:0,21,339	0/0:28,0:27:12.04:0,12,213	0/0:30,1:30:57.18:0,57,977	0/0:20,0:20:52.73:0,53,741	0/0:28,0:28:74.92:0,75,1194	0/0:9,0:9:8.76:0,9,84
chr10	57794780	.	CAGACAGAG	C	4033.71	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=-4.575;DP=651;FS=1.334;HRun=0;HaplotypeScore=193.3463;InbreedingCoeff=0.0317;MQ=58.47;MQ0=8;MQRankSum=-0.499;QD=9.81;ReadPosRankSum=-7.209;VQSLOD=0.2720;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:24,8:31:42.55:609,43,0	0/1:8,0:8:37.88:38,0,40	0/0:32,0:24:38.32:0,38,1385	0/0:20,0:18:42.12:0,42,925	1/1:22,6:28:29.68:465,30,0	0/0:29,0:29:69.24:0,69,2354	0/0:25,0:22:51.65:0,52,1790	0/1:31,0:27:99:405,0,226	0/1:28,0:28:85.42:85,0,125	0/1:31,0:31:99:147,0,1194	0/1:24,0:22:28.41:173,0,28	0/0:21,0:21:39.13:0,39,1241	0/0:24,0:23:45.15:0,45,1416	0/0:14,0:14:18.06:0,18,460	0/1:26,0:25:92.93:226,0,93	1/1:13,1:14:21.04:319,21,0	0/1:17,0:17:84.59:131,0,85	1/1:11,0:11:12.02:146,12,0	0/1:15,0:14:69.75:70,0,276	0/1:20,0:17:99:139,0,300	0/1:26,0:25:99:151,0,555	0/0:16,0:16:15.05:0,15,405	0/0:26,0:26:35.76:0,36,1044	0/0:33,0:33:30.10:0,30,779	0/1:31,0:30:99:199,0,897	0/1:24,0:24:99:304,0,471	0/1:29,0:29:99:120,0,796	1/1:16,0:16:21.92:308,22,0
chr10	57795378	.	G	GAA	1242.45	PASS	AB=0.727;AC=7;AF=0.125;AN=56;BaseQRankSum=6.749;DP=522;FS=6.802;HRun=10;HaplotypeScore=72.4357;InbreedingCoeff=0.7118;MQ=54.08;MQ0=16;MQRankSum=-6.162;QD=13.81;ReadPosRankSum=-1.727;VQSLOD=1.3938;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:20,10:30:3.70:511,0,4	0/0:9,0:8:24.01:0,24,233	0/0:3,0:1:1.82:0,2,5	0/0:2,0:2:2.99:0,3,27	1/1:18,11:32:72.60:796,73,0	0/0:22,0:20:30.56:0,31,465	0/0:15,0:15:36.05:0,36,358	0/0:19,0:15:30.03:0,30,304	0/0:17,0:17:42.06:0,42,420	0/0:23,0:24:53.78:0,54,516	0/0:20,0:19:38.79:0,39,378	0/0:20,0:20:40.30:0,40,417	0/0:11,0:12:26.77:0,27,255	0/0:18,0:18:29.99:0,30,298	0/0:10,0:11:32.80:0,33,310	1/1:17,0:17:5.68:38,6,0	0/0:27,0:27:66.99:0,67,671	1/1:9,0:9:3:27,3,0	0/0:22,0:21:38.96:0,39,380	0/0:21,0:22:38.74:0,39,378	0/0:18,0:18:42.08:0,42,427	0/0:16,0:15:33.03:0,33,336	0/0:16,0:18:44.29:0,44,395	0/0:14,0:16:32.25:0,32,342	0/0:21,0:24:41.53:0,42,532	0/0:26,0:25:50.48:0,50,481	0/0:32,0:32:62.24:0,62,588	0/0:12,0:14:32.52:0,33,298
chr10	57795383	.	A	AAAAAAAGAAAAAG	3080.01	PASS	AB=1.000;AC=12;AF=0.214;AN=56;BaseQRankSum=6.775;DP=539;FS=6.277;HRun=0;HaplotypeScore=178.5109;InbreedingCoeff=0.6763;MQ=55.32;MQ0=16;MQRankSum=-7.251;QD=18.78;ReadPosRankSum=-0.922;VQSLOD=2.1259;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:32:25.49:617,25,0	0/0:9,0:8:23.92:0,24,524	1/1:5,0:2:0.94:2,1,0	0/0:3,0:3:5.93:0,6,41	1/1:21,1:34:83.58:1976,84,0	0/1:27,0:25:3.90:4,0,1318	0/0:14,0:14:36.04:0,36,766	0/0:23,0:19:44.04:0,44,561	0/0:15,0:15:45.06:0,45,991	0/0:24,0:24:63.10:0,63,1284	0/0:20,0:19:44.10:0,44,953	0/0:19,0:19:28.68:0,29,1081	0/0:13,0:13:36.06:0,36,843	0/0:14,0:14:36.04:0,36,817	0/0:15,0:15:45.06:0,45,963	1/1:4,0:19:3.01:53,3,0	0/1:31,0:31:39.08:39,0,1430	1/1:3,5:13:9.03:542,9,0	0/0:20,0:19:38.90:0,39,669	0/0:23,0:23:59.09:0,59,1013	0/0:15,0:15:42.10:0,42,1291	0/0:18,0:17:45.03:0,45,749	0/0:17,0:16:42.15:0,42,861	0/0:15,0:14:9.15:0,9,1044	0/0:24,0:24:59.11:0,59,1604	0/0:31,0:29:78.11:0,78,1655	0/0:28,0:27:71.81:0,72,1176	0/0:15,0:15:36.07:0,36,1103
chr10	57797663	.	T	TA	5843.81	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-14.407;DP=505;FS=1.589;HRun=8;HaplotypeScore=48.0364;InbreedingCoeff=0.9984;MQ=80.32;MQ0=0;MQRankSum=-1.727;QD=28.37;ReadPosRankSum=0.472;VQSLOD=5.1152;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:78.03:0,78,714	0/0:10,0:10:30.02:0,30,275	0/0:15,0:14:27:0,27,242	0/0:16,0:17:30.26:0,30,231	0/0:18,0:18:51.03:0,51,466	0/0:26,0:26:61.43:0,61,567	0/0:9,0:9:27:0,27,243	0/0:27,0:27:63.02:0,63,573	1/1:1,15:16:39.12:450,39,0	1/1:3,25:28:75.22:866,75,0	1/1:1,15:16:45.13:519,45,0	0/0:17,0:17:38.98:0,39,346	0/0:15,0:15:35.96:0,36,312	0/0:15,0:15:39.02:0,39,357	1/1:2,12:14:36.11:416,36,0	0/0:23,1:24:34.41:0,34,565	0/0:14,0:14:35.98:0,36,323	0/0:14,0:14:35.98:0,36,320	1/1:3,11:14:33.09:372,33,0	1/1:4,14:18:41.97:437,42,0	1/1:2,9:11:24.07:277,24,0	0/0:15,0:15:42.01:0,42,380	0/0:19,0:19:54:0,54,487	0/0:13,0:13:32.96:0,33,294	1/1:2,15:17:38.98:450,39,0	1/1:5,28:33:84.25:969,84,0	1/1:2,30:32:78.16:875,78,0	1/1:1,6:7:20.98:213,21,0
chr10	57797975	.	C	CT	3056.51	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-12.032;DP=585;FS=2.111;HRun=1;HaplotypeScore=56.4461;InbreedingCoeff=0.9985;MQ=79.97;MQ0=0;MQRankSum=-0.058;QD=36.39;ReadPosRankSum=1.078;VQSLOD=3.7626;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,20:20:48.16:719,48,0	0/0:8,0:7:24.08:0,24,311	0/0:11,0:11:27.03:0,27,314	0/0:16,0:17:44.93:0,45,494	1/1:1,26:27:75.21:1099,75,0	0/0:21,0:21:60.19:0,60,778	0/0:10,0:10:27.09:0,27,351	0/0:28,0:28:81.24:0,81,1014	0/0:20,0:20:60.20:0,60,779	0/0:31,0:31:93.28:0,93,1175	0/0:16,0:16:42.12:0,42,530	0/0:27,0:27:81.26:0,81,1052	0/0:30,0:30:90.28:0,90,1153	0/0:26,0:26:78.24:0,78,997	0/0:20,0:20:60.18:0,60,765	1/1:1,18:19:45.15:675,45,0	0/0:27,0:27:75.20:0,75,972	1/1:1,17:18:49.98:725,50,0	0/0:16,0:16:48.14:0,48,598	0/0:18,0:18:54.18:0,54,697	0/0:27,0:27:81.25:0,81,1036	0/0:9,0:9:27.07:0,27,336	0/0:11,0:11:33.11:0,33,428	0/0:21,0:21:57.10:0,57,701	0/0:19,0:19:51.16:0,51,650	0/0:35,0:35:96.29:0,96,1210	0/0:37,0:37:99:0,99,1284	0/0:16,0:16:48.16:0,48,623
chr10	57798456	.	TA	T	2038.73	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=8.609;DP=469;FS=4.544;HRun=6;HaplotypeScore=46.1774;InbreedingCoeff=0.9692;MQ=68.98;MQ0=0;MQRankSum=0.774;QD=21.02;ReadPosRankSum=3.253;VQSLOD=2.8991;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,38:41:72.18:773,72,0	0/0:7,0:7:21.06:0,21,261	0/0:9,0:9:16.82:0,17,194	0/0:4,0:4:8.19:0,8,65	1/1:1,19:20:57.08:589,57,0	0/0:14,0:13:33.11:0,33,434	0/0:10,0:10:27.09:0,27,354	0/0:33,0:33:99:0,99,1288	0/0:19,0:19:42.12:0,42,535	0/0:22,0:22:63.17:0,63,770	0/0:20,0:20:57.17:0,57,735	0/0:8,0:8:15.04:0,15,182	0/0:12,0:12:24.08:0,24,316	0/0:12,0:12:24.08:0,24,315	0/0:18,0:18:48.16:0,48,630	1/1:2,9:11:24.06:257,24,0	0/0:28,0:28:69.20:0,69,887	1/1:2,23:25:54.13:580,54,0	0/0:21,0:21:57.18:0,57,748	0/0:15,0:15:45.13:0,45,567	0/0:14,0:14:42.14:0,42,552	0/0:7,0:7:21.07:0,21,276	0/0:11,0:11:30.10:0,30,395	0/0:14,0:14:39.12:0,39,499	0/0:12,0:12:30.10:0,30,395	0/0:25,0:25:75.24:0,75,986	0/0:27,0:27:81.23:0,81,1033	0/0:10,0:10:30.10:0,30,395
chr10	57799620	.	AAAGAG	A	1076.53	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=3.827;DP=458;FS=2.825;HRun=0;HaplotypeScore=83.0688;InbreedingCoeff=0.8678;MQ=63.30;MQ0=22;MQRankSum=-5.998;QD=22.90;ReadPosRankSum=1.206;VQSLOD=3.4740;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,15:19:32.91:575,33,0	0/0:7,0:7:15.05:0,15,373	0/0:53,0:15:34.63:0,35,531	0/0:49,0:19:39.97:0,40,562	1/1:2,8:9:24.05:396,24,0	0/0:21,0:21:52.03:0,52,1099	0/0:7,0:6:9.02:0,9,200	0/0:21,0:21:48.63:0,49,1131	0/0:8,0:8:15.05:0,15,406	0/0:20,0:20:48.16:0,48,1242	0/0:18,0:18:42.14:0,42,1143	0/0:6,0:6:18.06:0,18,486	0/0:9,0:9:18.06:0,18,434	0/0:5,0:5:3.01:0,3,78	0/0:13,0:13:30.05:0,30,648	1/1:4,2:6:5.98:104,6,0	0/0:24,0:24:60.21:0,60,1494	1/1:4,5:8:9:151,9,0	0/0:19,0:18:36.07:0,36,830	0/0:11,0:11:33.11:0,33,808	0/0:11,0:11:27.09:0,27,719	0/0:6,0:6:15.04:0,15,372	0/0:9,0:9:21.07:0,21,491	0/0:7,0:7:21.07:0,21,554	0/0:17,0:17:48.16:0,48,1188	0/0:25,0:23:63.18:0,63,1425	0/0:30,0:29:57.88:0,58,1514	0/0:14,0:13:14.99:0,15,307
chr10	57801089	.	G	GTGGT	5308.04	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-10.414;DP=641;FS=3.543;HRun=0;HaplotypeScore=96.5442;InbreedingCoeff=0.9888;MQ=87.34;MQ0=2;MQRankSum=-5.396;QD=59.64;ReadPosRankSum=2.457;VQSLOD=6.7825;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,26:30:78.27:2074,78,0	0/0:4,0:4:12.04:0,12,224	0/0:20,0:20:57.20:0,57,1026	0/0:25,0:25:68.58:0,69,1193	1/1:4,18:22:39.09:979,39,0	0/0:27,0:27:69.24:0,69,1288	0/0:25,0:25:75.24:0,75,1346	0/0:36,0:36:99:0,105,1889	0/0:25,0:25:69.24:0,69,1271	0/0:29,0:29:78.26:0,78,1423	0/0:10,0:10:27.09:0,27,493	0/0:29,0:29:78.27:0,78,1456	0/0:30,0:30:84.27:0,84,1522	0/0:22,0:22:63.22:0,63,1176	0/0:23,0:23:63.22:0,63,1176	1/1:3,25:28:69.24:1775,69,0	0/0:29,0:29:87.26:0,87,1579	1/1:1,6:7:18.06:480,18,0	0/0:20,0:20:51.17:0,51,952	0/0:13,0:13:33.11:0,33,616	0/0:36,0:36:99:0,102,1872	0/0:14,0:14:36.12:0,36,658	0/0:14,0:14:39.12:0,39,696	0/0:26,0:26:69.24:0,69,1287	0/0:12,0:12:36.11:0,36,642	0/0:32,0:32:87.30:0,87,1614	0/0:34,0:34:93.32:0,93,1735	0/0:17,0:17:51.17:0,51,949
chr10	57801343	.	TA	T	158.59	PASS	AC=2;AF=0.038;AN=52;BaseQRankSum=2.477;DP=219;FS=14.388;HRun=4;HaplotypeScore=53.4957;InbreedingCoeff=0.4576;MQ=64.62;MQ0=1;MQRankSum=-3.481;QD=14.42;ReadPosRankSum=-0.073;VQSLOD=1.6179;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:6:2.77:0,3,15	./.	0/0:6,0:3:8.79:0,9,64	0/0:4,0:3:2.58:0,3,40	0/0:7,0:7:18.54:0,19,82	0/0:17,0:17:48.14:0,48,619	0/0:2,0:2:3.01:0,3,41	0/0:23,0:22:60.82:0,61,698	0/0:4,0:4:9.03:0,9,116	0/0:12,0:12:32.92:0,33,367	0/0:5,0:5:13.28:0,13,156	0/0:9,0:9:27.09:0,27,364	0/0:5,0:5:15.04:0,15,182	0/0:5,0:5:15.01:0,15,182	0/0:7,0:6:9.50:0,10,118	0/0:11,0:10:18.28:0,18,70	0/0:17,0:18:34.31:0,34,458	1/1:3,8:11:23.65:250,24,0	0/0:10,0:10:29.92:0,30,311	0/0:6,0:6:15.03:0,15,178	./.	0/0:7,0:7:21.07:0,21,284	0/0:7,0:7:15.03:0,15,185	0/0:2,0:2:6:0,6,64	0/0:8,0:8:5.16:0,5,36	0/0:7,0:7:21.07:0,21,271	0/0:9,0:9:21.03:0,21,253	0/0:9,0:8:16.99:0,17,195
chr10	57804194	.	TGAGAAGAGAA	T	4406.05	PASS	AB=1.000;AC=20;AF=0.385;AN=52;BaseQRankSum=5.658;DP=789;FS=0.549;HRun=0;HaplotypeScore=232.5936;InbreedingCoeff=0.7850;MQ=73.10;MQ0=11;MQRankSum=-6.461;QD=15.46;ReadPosRankSum=1.388;VQSLOD=3.8642;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:36.12:0,36,1478	1/1:6,0:6:3.01:63,3,0	0/1:63,0:33:0:0,0,0	./.	0/0:37,0:37:60.21:0,60,2518	0/0:19,0:18:30.10:0,30,1258	0/0:34,0:34:18.06:0,18,888	1/1:22,0:22:2.74:12,3,0	0/0:16,0:24:33.06:0,33,394	1/1:19,3:22:18.06:484,18,0	1/1:21,5:26:21.06:507,21,0	0/0:34,0:34:72.25:0,72,3413	0/0:26,0:27:48.16:0,48,1961	0/0:26,0:26:42.14:0,42,1974	0/0:18,0:19:18.06:0,18,544	0/0:14,0:23:33.06:0,33,345	1/1:22,5:27:6.15:294,6,0	0/0:17,0:18:18.02:0,18,591	./.	1/1:20,10:30:39.12:1011,39,0	0/1:27,0:25:5.80:49,0,6	0/0:31,0:31:51.17:0,51,2338	0/0:18,0:18:6.02:0,6,296	0/0:34,0:34:39.13:0,39,1715	0/0:17,0:26:33.07:0,33,334	1/1:19,10:29:42.14:1071,42,0	1/1:21,8:29:30.10:828,30,0	1/1:3,1:4:3.01:88,3,0
chr10	57804270	.	C	CAGT	28211.31	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-12.057;DP=745;FS=2.450;HRun=0;HaplotypeScore=127.1607;InbreedingCoeff=0.9986;MQ=77.22;MQ0=1;MQRankSum=-8.906;QD=58.17;ReadPosRankSum=2.203;VQSLOD=6.5039;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,33:38:96.32:2168,96,0	1/1:0,9:9:27.09:638,27,0	0/0:27,0:27:55.43:0,55,985	0/0:33,0:26:52.83:0,53,858	1/1:2,21:23:57.20:1343,57,0	0/0:22,0:22:63.20:0,63,1083	0/0:22,0:22:66.16:0,66,1100	1/1:2,40:46:99:2769,135,0	1/1:1,25:26:72.25:1699,72,0	1/1:3,24:28:84.27:1856,84,0	1/1:0,17:17:51.17:1136,51,0	0/0:34,0:34:99:0,102,1762	0/0:38,0:38:99:0,114,1978	0/0:20,0:20:54.15:0,54,891	1/1:0,21:22:51.18:1204,51,0	1/1:4,33:37:93.32:2192,93,0	1/1:2,25:29:63.22:1478,63,0	1/1:1,21:21:63.22:1489,63,0	1/1:1,16:18:53.50:1006,53,0	1/1:4,29:33:84.29:1942,84,0	1/1:4,35:40:87.30:2032,87,0	0/0:16,0:16:45.14:0,45,750	0/0:14,0:14:42.12:0,42,705	0/0:32,0:32:93.32:0,93,1607	1/1:1,28:29:78.27:1781,78,0	1/1:4,28:32:87.27:1882,87,0	1/1:5,18:27:57:1204,57,0	1/1:2,7:9:18.06:392,18,0
chr10	57808613	.	TTG	T	4399.40	PASS	AB=1.000;AC=32;AF=0.593;AN=54;BaseQRankSum=-3.244;DP=616;FS=2.194;HRun=0;HaplotypeScore=82.8656;InbreedingCoeff=0.4220;MQ=53.10;MQ0=11;MQRankSum=-5.817;QD=9.84;ReadPosRankSum=-5.042;VQSLOD=3.7604;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:34,0:34:17.55:18,0,84	1/1:13,0:13:27.30:185,27,0	0/0:55,0:13:11.29:0,11,124	0/1:45,0:12:20.86:21,0,109	0/1:38,0:38:41.92:138,0,42	0/0:12,0:12:35.66:0,36,329	0/0:25,0:25:67.56:0,68,576	1/1:28,1:29:65.41:401,65,0	./.	1/1:34,1:34:85.07:611,85,0	1/1:22,1:23:50.90:382,51,0	0/0:17,0:17:18.19:0,18,295	0/1:9,0:9:15.80:16,0,75	0/0:22,0:22:51.18:0,51,338	1/1:14,0:14:27.76:188,28,0	0/1:21,0:21:33.41:114,0,33	1/1:25,2:27:56.15:429,56,0	0/1:18,0:18:14.09:19,0,14	1/1:13,0:13:35.56:276,36,0	1/1:0,20:20:38.63:278,39,0	1/1:13,0:12:25.27:159,25,0	0/0:16,0:15:31.97:0,32,291	0/0:14,0:14:24.79:0,25,241	0/1:21,0:20:2.56:3,0,172	1/1:9,2:11:22.37:145,22,0	1/1:26,0:26:56.67:417,57,0	1/1:32,1:32:65.31:550,65,0	0/1:4,0:4:10.34:53,0,10
chr10	57808614	.	TG	T	5229	PASS	AB=0.958;AC=39;AF=0.722;AN=54;BaseQRankSum=-0.351;DP=607;FS=13.911;HRun=1;HaplotypeScore=70.0008;InbreedingCoeff=0.3289;MQ=52.40;MQ0=11;MQRankSum=-3.663;QD=9.56;ReadPosRankSum=-1.666;VQSLOD=0.8509;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:34,0:34:19.76:137,20,0	1/1:13,0:13:31.13:200,31,0	0/1:52,1:11:30.40:30,0,95	0/1:45,0:12:19.63:20,0,80	1/1:38,0:38:39.92:274,40,0	0/0:12,0:12:33.24:0,33,247	0/0:25,0:25:49.94:0,50,417	1/1:25,2:27:68.01:456,68,0	./.	1/1:32,1:32:87.54:654,88,0	1/1:24,0:24:61.09:463,61,0	0/1:17,0:17:4.59:5,0,230	0/1:9,0:9:55.42:55,0,57	0/1:22,0:22:0.08:0,0,133	1/1:12,0:12:31.18:215,31,0	0/1:9,12:21:9.47:57,0,9	1/1:25,1:26:57.40:416,57,0	1/1:17,1:18:2.64:73,3,0	1/1:13,0:13:35.55:274,36,0	1/1:20,0:20:38.62:267,39,0	1/1:13,0:12:29.83:230,30,0	0/1:16,0:15:0.79:1,0,206	0/0:15,0:15:22.48:0,22,174	0/1:21,0:20:7.31:7,0,103	1/1:9,1:10:25.28:167,25,0	1/1:22,2:24:67.18:470,67,0	1/1:33,1:33:92.53:705,93,0	0/1:4,0:4:5.18:53,0,5
chr10	57808615	.	GT	G	907.28	PASS	AB=0.997;AC=14;AF=0.259;AN=54;BaseQRankSum=3.842;DP=604;FS=10.954;HRun=16;HaplotypeScore=85.1757;InbreedingCoeff=0.3657;MQ=52.02;MQ0=11;MQRankSum=-1.445;QD=3.22;ReadPosRankSum=1.822;VQSLOD=-0.4711;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:26,8:34:11.71:278,12,0	0/0:13,0:13:3.24:0,3,24	0/1:50,1:9:9.50:10,0,95	0/0:45,0:12:4.87:0,5,143	1/1:30,5:35:7.96:397,8,0	0/0:12,0:12:30.08:0,30,342	0/0:25,0:25:59.75:0,60,609	0/1:29,0:29:7.07:7,0,33	./.	0/1:32,0:31:12.99:13,0,31	0/1:24,0:24:0.42:0,0,19	0/0:16,0:16:38.97:0,39,408	0/0:8,0:8:11.83:0,12,121	0/0:22,0:22:44.19:0,44,426	0/0:12,0:12:5.09:0,5,23	1/1:14,7:21:20.75:198,21,0	0/0:26,0:26:5.16:0,5,14	1/1:6,12:18:14.94:143,15,0	0/0:16,0:16:7.01:0,7,48	0/0:20,0:20:1.22:0,1,3	0/0:13,0:12:0.43:0,0,2	0/0:16,0:15:33.55:0,34,376	0/0:15,0:15:24.04:0,24,262	0/0:21,0:20:15.02:0,15,162	0/0:10,0:10:2.99:0,3,20	0/0:24,0:24:6.37:0,6,44	0/1:33,0:33:12.79:13,0,58	0/1:4,0:4:0.04:0,0,1
chr10	57809818	.	A	AT	475.17	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-4.383;DP=548;FS=3.871;HRun=11;HaplotypeScore=56.2864;InbreedingCoeff=0.6798;MQ=68.28;MQ0=0;MQRankSum=-2.199;QD=16.39;ReadPosRankSum=-0.793;VQSLOD=4.1149;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:65.64:0,66,508	0/0:7,0:7:17.89:0,18,135	0/0:7,0:8:13.43:0,13,79	0/0:11,0:10:4.84:0,5,59	0/0:27,0:28:66.88:0,67,515	0/0:17,0:18:49.85:0,50,377	0/0:12,0:12:26.84:0,27,207	0/0:36,0:36:83.60:0,84,646	0/0:19,0:20:52.83:0,53,401	0/0:24,0:24:59.74:0,60,464	0/0:23,1:24:29.31:0,29,411	0/0:12,0:12:29.86:0,30,232	0/0:18,1:19:8.40:0,8,248	0/0:13,0:13:23.89:0,24,186	0/0:16,0:17:40.86:0,41,308	0/0:1,0:22:36.66:0,37,106	0/0:30,0:30:77.66:0,78,601	1/1:5,23:29:39.81:570,40,0	0/0:19,0:19:38.79:0,39,300	0/0:31,0:31:71.64:0,72,554	0/0:12,0:12:23.89:0,24,186	0/0:11,0:11:32.87:0,33,255	0/0:13,0:14:31.90:0,32,238	0/0:15,0:15:38.81:0,39,299	0/0:26,0:26:62.72:0,63,486	0/0:23,2:25:1.87:0,2,380	0/0:28,1:29:35.26:0,35,457	0/0:6,0:6:14.94:0,15,116
chr10	57809968	.	TAC	T	2393.12	PASS	AB=0.838;AC=36;AF=0.692;AN=52;BaseQRankSum=5.456;DP=474;FS=14.721;HRun=0;HaplotypeScore=73.1761;InbreedingCoeff=0.4860;MQ=57.69;MQ0=16;MQRankSum=0.666;QD=6.33;ReadPosRankSum=0.475;VQSLOD=1.7785;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:16,8:23:15.04:163,15,0	1/1:10,4:16:20.72:191,21,0	./.	./.	1/1:11,10:22:29.74:286,30,0	0/1:14,3:17:23.58:24,0,80	0/0:10,0:10:12.04:0,12,169	1/1:27,0:25:4.96:23,5,0	1/1:9,4:13:9.02:98,9,0	1/1:17,7:23:17.97:186,18,0	1/1:11,12:23:23.82:239,24,0	0/0:10,0:10:3.01:0,3,45	0/0:16,0:17:24.51:0,25,315	0/0:10,0:9:9.01:0,9,113	1/1:6,7:13:12.03:131,12,0	1/1:10,0:18:17.04:84,17,0	1/1:10,3:14:8.79:79,9,0	0/1:12,8:20:18.67:145,0,19	0/1:15,3:18:32.37:67,0,32	1/1:14,4:20:12.20:95,12,0	1/1:14,0:13:6.01:65,6,0	0/0:8,0:9:9.02:0,9,115	0/0:12,0:11:17.55:0,18,202	0/1:12,1:13:32.28:32,0,327	1/1:15,12:29:25.65:243,26,0	1/1:13,5:16:8.98:80,9,0	1/1:12,12:24:26.88:275,27,0	1/1:5,3:8:6.02:65,6,0
chr10	57810964	.	TTTG	T	2824.17	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=8.732;DP=634;FS=2.764;HRun=0;HaplotypeScore=96.0999;InbreedingCoeff=0.9801;MQ=62.79;MQ0=3;MQRankSum=-0.678;QD=27.42;ReadPosRankSum=2.664;VQSLOD=3.9342;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,28:33:56.65:826,57,0	0/0:18,0:18:8.32:0,8,572	0/0:16,0:13:23.80:0,24,366	0/0:19,0:14:32.29:0,32,430	1/1:6,29:35:90.18:1206,90,0	0/0:18,0:18:48.12:0,48,847	0/0:20,0:20:48.13:0,48,858	0/0:29,0:29:63.19:0,63,1142	0/0:19,0:19:48.14:0,48,890	0/0:21,0:21:54.16:0,54,1028	0/0:26,0:26:72.20:0,72,1324	0/0:15,0:15:39.08:0,39,673	0/0:21,0:21:57.16:0,57,1057	0/0:25,0:25:63.14:0,63,1122	0/0:22,0:22:51.15:0,51,1133	1/1:2,18:20:36.12:523,36,0	0/0:32,0:32:87.77:0,88,1734	1/1:0,15:15:30.10:430,30,0	0/0:17,0:16:42.13:0,42,782	0/0:34,0:34:84.26:0,84,1578	0/0:18,0:18:54.15:0,54,933	0/0:25,0:25:57.17:0,57,1065	0/0:19,0:19:51.17:0,51,952	0/0:22,0:22:54.19:0,54,1104	0/0:32,0:32:83.06:0,83,1484	0/0:34,0:34:90.26:0,90,1695	0/0:18,0:18:48.11:0,48,844	0/0:11,0:11:24.08:0,24,491
chr10	57812117	.	AT	A	3434.64	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=14.203;DP=727;FS=6.564;HRun=1;HaplotypeScore=97.7057;InbreedingCoeff=0.9977;MQ=81.64;MQ0=0;MQRankSum=-13.628;QD=37.33;ReadPosRankSum=1.462;VQSLOD=3.7544;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,31:30:81.27:1107,81,0	0/0:6,0:6:18.06:0,18,288	0/0:19,0:19:57.18:0,57,847	0/0:25,0:25:68.91:0,69,920	1/1:0,21:21:51.17:699,51,0	0/0:27,0:27:78.27:0,78,1246	0/0:20,0:20:60.19:0,60,931	0/0:32,0:32:90.31:0,90,1419	0/0:35,0:35:99:0,102,1630	0/0:38,0:38:99:0,114,1782	0/0:30,0:30:87.30:0,87,1385	0/0:20,0:20:60.20:0,60,952	0/0:17,0:17:51.16:0,51,788	0/0:24,0:23:66.18:0,66,985	0/0:44,0:44:99:0,132,2084	1/1:0,26:26:78.26:1082,78,0	0/0:26,0:26:78.24:0,78,1198	1/1:0,14:14:40.02:546,40,0	0/0:20,0:20:60.15:0,60,869	0/0:38,0:38:99:0,114,1817	0/0:26,0:26:75.24:0,75,1166	0/0:31,0:31:93.32:0,93,1483	0/0:29,0:29:87.29:0,87,1368	0/0:19,0:19:57.18:0,57,887	0/0:27,0:27:75.26:0,75,1194	0/0:36,0:36:99:0,105,1633	0/0:35,0:35:99:0,105,1672	0/0:11,0:11:33.11:0,33,527
chr10	57812122	.	GGCTTTCT	G	5372.92	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=13.581;DP=725;FS=6.236;HRun=0;HaplotypeScore=180.1220;InbreedingCoeff=0.9974;MQ=83.25;MQ0=0;MQRankSum=-13.013;QD=59.70;ReadPosRankSum=2.115;VQSLOD=4.4446;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,24:28:66.23:1666,66,0	0/0:6,0:6:18.06:0,18,717	0/0:20,0:20:57.20:0,57,2023	0/0:27,0:27:72.25:0,72,2703	1/1:5,16:21:42.14:1087,42,0	0/0:26,0:26:78.27:0,78,3106	0/0:20,0:20:60.21:0,60,2362	0/0:35,0:35:99:0,102,3794	0/0:37,0:37:99:0,111,4275	0/0:36,0:36:99:0,105,4115	0/0:28,0:28:78.22:0,78,2874	0/0:20,0:20:60.21:0,60,2330	0/0:17,0:17:51.18:0,51,1925	0/0:23,0:22:66.23:0,66,2518	0/0:46,0:46:99:0,135,5365	1/1:1,25:26:75.26:1942,75,0	0/0:25,0:25:69.24:0,69,2644	1/1:5,9:14:27.09:678,27,0	0/0:20,0:20:57.20:0,57,2230	0/0:38,0:38:99:0,111,4028	0/0:28,0:28:78.25:0,78,3022	0/0:34,0:34:99:0,102,3979	0/0:30,0:30:84.29:0,84,3276	0/0:18,0:18:54.14:0,54,2060	0/0:23,0:23:69.24:0,69,2598	0/0:32,0:32:93.28:0,93,3515	0/0:35,0:35:99:0,99,3885	0/0:11,0:11:33.04:0,33,889
chr10	57812413	.	AGTGTGT	A	8784.29	PASS	AB=0.655;AC=34;AF=0.607;AN=56;BaseQRankSum=12.783;DP=949;FS=2.265;HRun=0;HaplotypeScore=248.7306;InbreedingCoeff=0.7905;MQ=50.56;MQ0=16;MQRankSum=-12.150;QD=14.91;ReadPosRankSum=3.603;VQSLOD=4.1438;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:41,0:40:10.73:122,11,0	1/1:1,9:10:9.03:193,9,0	0/0:43,0:17:14.17:0,14,386	0/0:39,0:8:8.60:0,9,77	1/1:28,0:28:14.93:219,15,0	0/0:34,0:36:81.26:0,81,2324	0/0:38,0:42:68.90:0,69,1781	1/1:19,19:36:46.33:869,46,0	1/1:8,33:41:33.37:697,33,0	1/1:8,20:28:53.22:1119,53,0	1/1:5,29:34:27.45:579,27,0	0/0:28,0:29:69.24:0,69,1965	0/0:25,0:25:63.22:0,63,1799	0/0:33,0:33:81.28:0,81,2412	1/1:12,34:47:14.84:313,15,0	1/1:10,38:48:39.13:835,39,0	1/1:9,16:24:8.90:193,9,0	0/1:11,16:26:71.19:313,0,71	1/1:12,10:19:27.04:455,27,0	1/1:4,21:26:30.05:598,30,0	1/1:34,41:74:4.35:13,4,0	0/0:38,0:38:90.29:0,90,2536	0/0:28,0:30:71.28:0,71,1924	0/0:41,0:43:88:0,88,2421	1/1:2,22:24:15.05:321,15,0	1/1:10,27:37:46.81:1261,47,0	1/1:7,15:22:26.24:554,26,0	0/1:8,7:14:99:130,0,125
chr10	57812429	.	TGTGTGTGA	T	1304.56	PASS	AB=1.000;AC=20;AF=0.357;AN=56;BaseQRankSum=16.002;DP=881;FS=1.223;HRun=0;HaplotypeScore=272.4825;InbreedingCoeff=-0.1363;MQ=50.49;MQ0=16;MQRankSum=-14.852;QD=2.78;ReadPosRankSum=9.253;VQSLOD=1.4774;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,31:40:0.55:260,1,0	1/1:9,0:9:7.79:30,8,0	0/0:42,0:15:36.43:0,36,629	0/0:41,0:19:44.59:0,45,494	1/1:2,27:29:15.02:412,15,0	0/0:31,0:31:87.25:0,87,3035	0/0:39,0:39:98.69:0,99,2500	0/1:29,0:27:53.89:54,0,255	0/1:41,0:41:52.37:52,0,108	0/1:28,0:28:99:138,0,241	0/1:32,0:32:20.15:60,0,20	0/0:31,0:31:90.25:0,90,2880	0/0:26,0:26:75.21:0,75,2424	0/0:34,0:33:93.26:0,93,3254	0/1:36,0:36:23.11:23,0,26	0/1:43,0:43:35.20:82,0,35	0/1:21,0:21:15.13:15,0,55	0/1:26,0:25:11.94:12,0,166	0/1:15,0:12:47.37:47,0,96	0/1:26,0:26:50.16:50,0,90	0/0:61,0:60:5.12:0,5,111	0/0:33,0:33:96.27:0,96,3229	0/0:33,0:33:99:0,99,2748	0/0:41,0:41:99:0,106,3314	0/1:25,0:25:29.02:29,0,31	0/1:36,0:36:99:104,0,297	0/1:21,0:20:39.20:102,0,39	0/1:12,0:11:0.01:0,0,105
chr10	57812832	.	G	GT	383.98	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-1.252;DP=663;FS=2.395;HRun=10;HaplotypeScore=72.2484;InbreedingCoeff=0.7230;MQ=71.46;MQ0=0;MQRankSum=1.349;QD=15.36;ReadPosRankSum=-0.281;VQSLOD=3.9810;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:80.11:0,80,671	0/0:13,0:13:35.96:0,36,296	0/0:27,0:23:18.84:0,19,183	0/0:19,0:17:2.75:0,3,121	0/0:30,0:30:77.86:0,78,635	0/0:19,0:19:50.93:0,51,419	0/0:17,0:19:48.99:0,49,378	0/0:32,2:34:22.90:0,23,596	0/0:20,0:20:47.48:0,47,393	0/0:32,0:32:83.87:0,84,689	0/0:31,1:32:51.89:0,52,630	0/0:24,0:25:64.96:0,65,523	0/0:23,0:23:56.91:0,57,468	0/0:21,0:21:59.89:0,60,487	0/0:28,0:28:74.88:0,75,612	1/1:4,21:25:7.74:466,8,0	0/0:21,0:21:29.72:0,30,362	0/0:17,0:17:41.93:0,42,345	0/0:21,0:22:18.01:0,18,343	0/0:19,0:20:43.98:0,44,351	0/0:21,0:21:53.89:0,54,439	0/0:23,0:23:50.88:0,51,409	0/0:16,1:17:9.96:0,10,288	0/0:21,0:22:55.94:0,56,446	0/0:27,0:27:65.91:0,66,542	0/0:26,0:26:42.35:0,42,510	0/0:35,0:35:86.88:0,87,714	0/0:11,0:11:29.90:0,30,234
chr10	57814082	.	T	TCCTC	986.21	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-2.692;DP=562;FS=5.333;HRun=0;HaplotypeScore=95.7481;InbreedingCoeff=0.8386;MQ=61.05;MQ0=8;MQRankSum=-0.449;QD=29.89;ReadPosRankSum=0.210;VQSLOD=2.8160;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,9:19:18.06:444,18,0	0/0:5,0:5:15.02:0,15,201	0/0:27,0:12:15.74:0,16,194	0/0:30,0:9:6.76:0,7,103	1/1:1,11:14:27.09:661,27,0	0/0:24,0:24:47.77:0,48,895	0/0:22,0:22:45.15:0,45,755	0/0:33,0:33:23.87:0,24,537	0/0:32,0:32:60.18:0,60,956	0/0:19,0:19:42.13:0,42,676	0/0:10,0:10:21.06:0,21,328	0/0:21,0:21:42.14:0,42,688	0/0:32,0:32:63.21:0,63,1051	0/0:23,0:23:57.15:0,57,925	0/0:25,0:25:54.18:0,54,894	0/0:37,0:37:90.26:0,90,1457	0/0:26,0:26:57.14:0,57,877	0/0:12,0:12:18.06:0,18,292	0/0:12,0:11:24.08:0,24,403	0/0:7,0:7:21.07:0,21,352	0/0:35,0:34:81.25:0,81,1306	0/0:5,0:5:12.03:0,12,176	0/0:1,0:1:3.01:0,3,50	0/0:19,0:19:33.50:0,33,590	0/0:12,0:12:21.07:0,21,353	0/0:24,0:24:51.17:0,51,856	0/0:20,0:20:42.13:0,42,677	0/0:14,0:14:30.10:0,30,487
chr10	57815445	.	C	CT	2328.27	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=-6.905;DP=544;FS=13.082;HRun=9;HaplotypeScore=54.7139;InbreedingCoeff=0.8273;MQ=69.00;MQ0=1;MQRankSum=0.243;QD=20.98;ReadPosRankSum=0.096;VQSLOD=3.1533;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,29:38:85.88:914,86,0	0/0:7,0:7:14.99:0,15,130	0/1:12,0:12:24.34:24,0,59	0/0:8,0:6:5.96:0,6,47	1/1:1,22:24:39.90:626,40,0	0/0:16,0:16:38.98:0,39,339	0/0:14,0:14:32.96:0,33,282	0/0:43,0:43:80.89:0,81,693	0/0:17,0:17:41.95:0,42,360	0/0:26,0:26:71.98:0,72,625	0/0:19,0:19:44.97:0,45,387	0/0:18,0:18:47.99:0,48,417	0/0:16,0:16:47.99:0,48,417	0/0:24,0:24:62.98:0,63,547	0/0:16,0:17:44.02:0,44,370	1/1:3,14:17:36.10:398,36,0	0/0:27,0:27:80.96:0,81,697	1/1:4,15:19:48.13:530,48,0	0/0:23,0:23:53.58:0,54,453	0/0:17,0:17:47.99:0,48,417	0/0:4,0:4:8.99:0,9,78	0/0:17,0:17:47.98:0,48,414	0/0:17,0:17:50.95:0,51,436	0/0:12,0:12:26.96:0,27,230	0/0:25,0:25:59.96:0,60,516	0/0:22,0:22:56.98:0,57,495	0/0:24,0:23:71.99:0,72,624	0/0:20,0:20:50.98:0,51,443
chr10	57816932	.	G	GGA	4540.14	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=7.580;DP=460;FS=4.107;HRun=0;HaplotypeScore=106.9968;InbreedingCoeff=0.8541;MQ=69.67;MQ0=2;MQRankSum=-0.360;QD=12.61;ReadPosRankSum=0.022;VQSLOD=4.4303;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:9,0:9:7.57:76,8,0	1/1:4,0:4:5.56:49,6,0	0/0:6,0:6:8.78:0,9,71	0/0:6,0:5:5.89:0,6,38	1/1:17,0:17:8.98:118,9,0	0/0:14,0:14:13.23:0,13,358	0/0:2,0:2:3.01:0,3,44	1/1:35,0:35:87.89:598,88,0	1/1:17,0:17:41:209,41,0	1/1:34,0:34:85:452,85,0	1/1:18,0:18:2.22:53,2,0	0/0:18,0:18:31.27:0,31,606	0/0:16,0:16:35.55:0,36,412	0/0:15,0:15:36.06:0,36,448	1/1:28,0:28:61.91:319,62,0	1/1:9,0:9:18.05:215,18,0	1/1:22,0:22:53.06:252,53,0	1/1:1,12:14:9.70:378,10,0	1/1:18,0:18:50.95:308,51,0	1/1:43,0:43:98.30:461,98,0	1/1:7,0:7:11.26:70,11,0	0/0:8,0:8:20.96:0,21,187	0/0:12,0:12:36.07:0,36,465	0/0:3,0:3:8.99:0,9,74	1/1:25,0:25:59.34:297,59,0	1/1:25,0:25:64.79:331,65,0	1/1:26,0:26:58.10:286,58,0	1/1:8,0:8:15.40:69,15,0
chr10	57820455	.	C	CA	2120.12	PASS	AB=0.974;AC=10;AF=0.179;AN=56;BaseQRankSum=-3.705;DP=519;FS=9.268;HRun=8;HaplotypeScore=54.2247;InbreedingCoeff=0.7897;MQ=80.17;MQ0=0;MQRankSum=-0.871;QD=16.18;ReadPosRankSum=1.031;VQSLOD=2.8349;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,29:34:66.20:762,66,0	0/0:8,0:8:21.01:0,21,192	0/1:19,0:18:16.26:16,0,103	0/1:16,1:15:3.16:3,0,59	1/1:5,19:24:51.11:569,51,0	0/0:23,0:23:63.02:0,63,572	0/0:7,0:7:21.01:0,21,192	0/0:27,0:27:75.02:0,75,680	0/0:19,0:19:44.99:0,45,407	0/0:16,0:16:33.01:0,33,299	0/0:16,0:16:42.88:0,43,377	0/0:7,0:7:20.98:0,21,184	0/0:18,0:18:38.98:0,39,347	0/0:18,0:18:47.99:0,48,432	0/0:17,0:17:42.02:0,42,384	1/1:3,15:18:51.05:557,51,0	0/0:16,0:16:48.03:0,48,439	1/1:4,14:18:33.10:379,33,0	0/0:21,0:21:45.01:0,45,412	0/0:27,0:27:59.97:0,60,535	0/0:12,0:12:33.02:0,33,302	0/0:20,0:21:56.06:0,56,500	0/0:20,0:20:43.83:0,44,447	0/0:19,0:19:48.02:0,48,439	0/0:20,0:20:51.01:0,51,463	0/0:18,0:18:51.02:0,51,463	0/0:31,0:31:78.02:0,78,705	0/0:7,0:7:21.01:0,21,192
chr10	57820471	.	A	AT	375.25	PASS	AB=1.000;AC=4;AF=0.071;AN=56;BaseQRankSum=1.078;DP=517;FS=7.071;HRun=11;HaplotypeScore=62.6062;InbreedingCoeff=0.6232;MQ=78.31;MQ0=0;MQRankSum=-2.014;QD=7.22;ReadPosRankSum=-1.804;VQSLOD=1.4843;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:62.74:0,63,487	0/0:9,0:9:23.90:0,24,186	0/0:18,0:16:22.01:0,22,152	0/1:15,0:13:1.24:1,0,8	0/0:26,0:26:56.75:0,57,441	0/0:28,0:28:71.69:0,72,554	0/1:11,0:12:0.15:0,0,122	0/0:29,0:29:59.70:0,60,462	0/0:16,0:16:38.84:0,39,300	0/0:11,1:13:26.85:0,27,209	0/0:20,1:21:26.30:0,26,381	0/0:8,0:8:17.92:0,18,137	0/0:14,0:14:38.81:0,39,298	0/0:17,0:17:44.82:0,45,348	0/0:18,0:18:38.81:0,39,296	1/1:5,19:25:30.67:469,31,0	0/0:17,0:18:37.86:0,38,281	0/0:13,0:13:26.82:0,27,202	0/0:15,0:15:23.88:0,24,184	0/0:20,1:21:23.34:0,23,364	0/0:13,0:13:26.87:0,27,209	0/0:21,0:21:53.77:0,54,415	0/0:21,0:21:50.28:0,50,394	0/0:17,1:18:11.39:0,11,271	0/0:18,1:19:23.36:0,23,364	0/0:18,0:18:44.68:0,45,339	0/0:35,0:35:85.87:0,86,663	0/0:7,0:7:14.92:0,15,116
chr10	57820887	.	AT	A	416.06	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.098;DP=631;FS=0.882;HRun=8;HaplotypeScore=62.0807;InbreedingCoeff=0.9933;MQ=71.87;MQ0=0;MQRankSum=0.413;QD=20.80;ReadPosRankSum=1.283;VQSLOD=3.7675;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:68.45:0,68,823	0/0:7,0:7:21.06:0,21,253	0/0:17,0:16:31.85:0,32,379	0/0:21,0:20:34.62:0,35,421	0/0:38,0:37:96.27:0,96,1134	0/0:23,0:23:69.21:0,69,827	0/0:16,0:16:48.14:0,48,569	0/0:30,0:30:78.22:0,78,921	0/0:26,0:26:75.20:0,75,882	0/0:44,0:44:99:0,120,1428	0/0:20,0:20:60.14:0,60,689	0/0:15,0:15:45.09:0,45,503	0/0:23,0:23:60.15:0,60,698	0/0:23,0:23:63.19:0,63,759	0/0:24,0:24:69.20:0,69,822	1/1:2,18:20:46.18:511,46,0	0/0:20,0:20:51.16:0,51,615	0/0:12,0:12:27.08:0,27,326	0/0:25,0:25:69.21:0,69,832	0/0:26,0:26:75.21:0,75,886	0/0:11,0:11:30.09:0,30,362	0/0:26,0:26:75.22:0,75,896	0/0:21,0:20:54.17:0,54,652	0/0:13,0:13:30.08:0,30,352	0/0:25,0:25:66.18:0,66,770	0/0:24,0:24:66.18:0,66,767	0/0:40,0:40:99:0,111,1337	0/0:12,0:12:36.11:0,36,435
chr10	57821576	.	CTT	C	421.10	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=2.292;DP=556;FS=1.672;HRun=16;HaplotypeScore=77.3581;InbreedingCoeff=0.9184;MQ=60.91;MQ0=9;MQRankSum=5.603;QD=10.27;ReadPosRankSum=3.018;VQSLOD=2.4668;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,16:25:32.77:325,33,0	0/0:9,0:8:15.03:0,15,162	0/0:51,0:16:11.13:0,11,83	0/0:32,1:16:13.56:0,14,98	1/1:7,9:16:26.61:217,27,0	0/0:15,0:16:33.17:0,33,486	0/0:16,0:16:32.55:0,33,369	0/0:30,0:28:48.85:0,49,389	0/0:12,0:12:20.87:0,21,189	0/0:19,0:19:25.27:0,25,217	0/0:23,0:17:24.83:0,25,223	0/0:12,0:12:23.95:0,24,274	0/0:17,0:18:38.45:0,38,443	0/0:17,0:17:38.98:0,39,430	0/0:15,0:15:27.92:0,28,297	0/0:14,0:10:17.91:0,18,161	0/0:17,0:16:19.18:0,19,204	0/0:10,0:10:21.86:0,22,220	0/0:18,0:18:41.08:0,41,369	0/0:26,0:23:29.94:0,30,299	0/0:5,0:5:8.96:0,9,78	0/0:13,0:15:30:0,30,292	0/0:24,0:25:48.62:0,49,529	0/0:20,0:22:55.82:0,56,593	0/0:24,0:19:40.05:0,40,394	0/0:26,0:24:52.96:0,53,562	0/0:30,0:30:52.01:0,52,557	0/0:9,0:9:20.90:0,21,181
chr10	57821741	.	AT	A	6325.90	PASS	AB=0.917;AC=29;AF=0.518;AN=56;BaseQRankSum=10.597;DP=573;FS=4.427;HRun=10;HaplotypeScore=59.5032;InbreedingCoeff=0.9244;MQ=66.50;MQ0=0;MQRankSum=-0.556;QD=20.15;ReadPosRankSum=1.794;VQSLOD=5.9795;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,114,1250	1/1:0,6:6:18:156,18,0	0/1:10,1:11:6.23:6,0,205	0/0:13,0:13:28.97:0,29,274	0/0:27,0:27:63.59:0,64,677	0/0:23,0:23:60.16:0,60,664	0/0:18,0:19:41.95:0,42,446	1/1:4,36:41:99:935,110,0	1/1:1,11:12:26.99:234,27,0	1/1:6,22:28:62.95:547,63,0	1/1:2,22:24:62.98:547,63,0	0/0:15,0:15:33.09:0,33,365	0/0:23,0:23:63.16:0,63,688	0/0:14,0:14:36.08:0,36,389	1/1:1,10:11:23.98:208,24,0	0/0:17,0:16:48.10:0,48,518	1/1:7,32:39:62.74:769,63,0	0/0:12,0:12:30.08:0,30,332	1/1:3,13:18:43.05:347,43,0	1/1:3,16:19:17.58:314,18,0	1/1:2,13:15:6.22:257,6,0	0/0:15,0:15:33.06:0,33,348	0/0:19,0:19:54.12:0,54,580	0/0:21,0:21:51.13:0,51,556	1/1:2,21:23:62.67:547,63,0	1/1:3,23:26:65.97:573,66,0	1/1:3,30:33:83.96:729,84,0	1/1:2,6:8:17.99:156,18,0
chr10	57822286	.	G	GT	587.08	PASS	AB=0.955;AC=8;AF=0.143;AN=56;BaseQRankSum=-3.840;DP=479;FS=3.050;HRun=14;HaplotypeScore=64.5110;InbreedingCoeff=0.3958;MQ=63.35;MQ0=5;MQRankSum=2.275;QD=4.73;ReadPosRankSum=-1.384;VQSLOD=1.5621;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:21,16:35:26.80:449,27,0	0/0:5,0:5:11.81:0,12,76	0/0:15,0:6:5.82:0,6,37	0/1:13,0:10:13.99:16,0,14	1/1:7,9:15:13.88:221,14,0	0/0:20,2:22:20.90:0,21,262	0/0:14,0:15:28.61:0,29,178	0/0:33,1:36:24.79:0,25,272	0/0:19,0:19:47.24:0,47,303	0/0:21,0:21:56.13:0,56,362	0/0:18,0:19:18.32:0,18,195	0/0:13,1:13:5.26:0,5,152	0/1:13,1:14:3.25:3,0,102	0/0:10,0:10:17.68:0,18,115	0/0:14,0:14:29.48:0,29,188	0/0:7,0:7:14.77:0,15,96	0/1:25,4:31:30.06:30,0,321	0/0:14,0:14:32.51:0,33,211	0/0:20,0:19:29.20:0,29,188	0/0:13,0:13:32.48:0,32,209	0/0:4,0:4:5.91:0,6,38	0/0:10,0:10:16.80:0,17,102	0/1:11,0:11:5.19:5,0,62	0/0:8,0:8:20.69:0,21,135	0/0:16,0:16:37.44:0,37,233	0/0:23,0:24:61.10:0,61,386	0/0:33,0:34:63.93:0,64,408	0/0:13,0:12:20.49:0,20,131
chr10	57823563	.	AT	A	857.98	PASS	AB=0.833;AC=9;AF=0.161;AN=56;BaseQRankSum=8.680;DP=498;FS=0.000;HRun=10;HaplotypeScore=50.7515;InbreedingCoeff=0.8543;MQ=65.11;MQ0=1;MQRankSum=0.413;QD=11.59;ReadPosRankSum=-0.132;VQSLOD=2.5247;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,16:17:22.12:311,22,0	0/1:3,1:5:11.18:11,0,99	0/0:9,0:9:19.86:0,20,197	0/0:8,0:8:9.02:0,9,100	1/1:4,19:23:53.86:453,54,0	0/0:25,0:24:66.16:0,66,721	0/0:17,0:17:39.11:0,39,431	0/0:30,0:30:78.19:0,78,847	0/0:20,1:21:16.06:0,16,403	0/0:21,0:21:48.12:0,48,524	0/0:25,1:26:40.14:0,40,671	0/0:16,0:16:48.13:0,48,530	0/0:19,0:19:51.14:0,51,564	0/0:11,0:11:27.07:0,27,299	0/0:19,1:20:25.03:0,25,476	1/1:3,0:19:30.55:90,31,0	0/0:17,0:17:42.11:0,42,465	1/1:3,6:9:17.98:156,18,0	0/0:22,0:22:54.13:0,54,589	0/0:22,0:22:57.15:0,57,630	0/0:13,0:13:39.08:0,39,420	0/0:15,0:15:42.10:0,42,456	0/0:14,0:14:33.98:0,34,367	0/0:12,0:12:30.08:0,30,332	0/0:11,0:11:27.07:0,27,292	0/0:29,0:29:75.20:0,75,823	0/0:32,0:32:81.22:0,81,892	0/0:12,0:13:33.09:0,33,365
chr10	57823762	.	AGTGTGTGTGT	A	3152.76	PASS	AB=0.910;AC=24;AF=0.480;AN=50;BaseQRankSum=5.196;DP=476;FS=4.434;HRun=0;HaplotypeScore=132.7277;InbreedingCoeff=0.6278;MQ=51.76;MQ0=16;MQRankSum=-7.886;QD=13.77;ReadPosRankSum=-0.528;VQSLOD=2.5391;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:16:18.06:0,18,557	./.	./.	./.	0/0:11,0:21:15.05:0,15,252	0/0:22,0:22:24.08:0,24,1072	0/0:14,0:14:18.06:0,18,705	1/1:22,0:18:2.98:22,3,0	1/1:8,14:22:23.99:637,24,0	0/1:13,0:11:0.52:44,0,1	0/1:7,9:14:8.56:164,0,9	0/0:15,0:15:24.08:0,24,848	0/0:21,0:23:36.12:0,36,1399	0/0:16,0:18:30.10:0,30,1168	1/1:9,12:22:24.08:674,24,0	1/1:5,0:14:12.04:275,12,0	1/1:7,5:12:3.01:89,3,0	0/1:10,0:9:1.02:1,0,116	1/1:9,5:13:8.99:126,9,0	1/1:11,1:14:9.03:203,9,0	0/1:26,0:25:41.29:41,0,113	0/0:6,0:7:12.04:0,12,498	0/0:15,0:14:21.06:0,21,806	0/0:18,0:19:27.08:0,27,1010	1/1:11,3:13:3.01:85,3,0	1/1:7,5:11:9.03:266,9,0	1/1:7,9:15:24.08:707,24,0	0/0:10,0:10:8.96:0,9,74
chr10	57824388	.	TTAGTGTTG	T	892.96	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.855;DP=565;FS=1.053;HRun=0;HaplotypeScore=135.2811;InbreedingCoeff=0.9867;MQ=52.61;MQ0=11;MQRankSum=-5.709;QD=55.81;ReadPosRankSum=-0.208;VQSLOD=3.2270;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:48.16:0,48,2021	0/0:8,0:8:24.08:0,24,1004	0/0:23,0:16:42.14:0,42,1462	0/0:14,0:10:18.02:0,18,574	0/0:27,0:27:81.21:0,81,3208	0/0:28,0:28:78.27:0,78,3408	0/0:15,0:15:39.13:0,39,1666	0/0:36,0:35:96.33:0,96,3968	0/0:16,0:16:45.15:0,45,1888	0/0:29,0:29:84.29:0,84,3665	0/0:30,0:30:87.22:0,87,3567	0/0:9,0:9:27.09:0,27,1181	0/0:19,0:19:57.20:0,57,2465	0/0:18,0:18:54.19:0,54,2316	0/0:16,0:16:45.15:0,45,1967	1/1:2,14:14:36.12:988,36,0	0/0:20,0:21:56.69:0,57,2222	0/0:27,0:26:57.20:0,57,2478	0/0:20,0:18:51.18:0,51,2224	0/0:32,0:32:93.32:0,93,4008	0/0:13,0:13:39.13:0,39,1703	0/0:17,0:17:48.16:0,48,2095	0/0:20,0:20:57.20:0,57,2413	0/0:10,0:10:24.08:0,24,1050	0/0:22,0:22:63.17:0,63,2532	0/0:21,0:21:60.21:0,60,2423	0/0:28,0:28:84.25:0,84,3468	0/0:13,0:13:39.10:0,39,1595
chr10	57827103	.	GA	G	5119.67	PASS	AB=0.720;AC=36;AF=0.643;AN=56;BaseQRankSum=5.041;DP=493;FS=0.000;HRun=12;HaplotypeScore=62.7713;InbreedingCoeff=0.8680;MQ=60.38;MQ0=4;MQRankSum=-2.045;QD=14.10;ReadPosRankSum=2.483;VQSLOD=5.3893;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:14,18:32:32.97:374,33,0	1/1:1,9:10:29.58:220,30,0	0/0:12,1:7:20.75:0,21,171	0/0:18,0:8:10.77:0,11,80	1/1:9,26:35:51.43:597,51,0	0/0:21,0:21:16.40:0,16,315	0/0:9,0:9:24.05:0,24,243	1/1:6,10:15:13.93:227,14,0	1/1:3,10:13:29.87:232,30,0	1/1:3,11:13:32.87:255,33,0	1/1:4,24:29:43.32:508,43,0	0/0:9,0:9:14.86:0,15,136	0/0:17,0:17:32.86:0,33,317	0/0:15,0:15:34.23:0,34,311	1/1:4,11:15:29.87:232,30,0	1/1:4,0:14:16.29:47,16,0	1/1:6,19:26:15.48:283,15,0	1/1:6,13:19:38.80:302,39,0	1/1:4,14:20:15.43:280,15,0	1/1:4,15:19:41.81:325,42,0	0/1:1,10:11:6.42:139,0,6	0/1:10,1:11:1.99:2,0,162	0/0:15,0:15:30.06:0,30,302	0/0:13,0:13:33.06:0,33,334	1/1:6,13:21:37.82:284,38,0	1/1:7,19:26:53.75:418,54,0	1/1:4,11:15:29.88:232,30,0	1/1:4,10:14:20.88:163,21,0
chr10	57827788	.	A	ACTTTTCTTTTT	5815.70	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-3.063;DP=638;FS=2.616;HRun=0;HaplotypeScore=179.2749;InbreedingCoeff=0.9960;MQ=65.93;MQ0=0;MQRankSum=-8.280;QD=57.58;ReadPosRankSum=0.042;VQSLOD=4.6918;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,18:30:36.12:1826,36,0	0/0:12,0:12:30.08:0,30,764	0/0:22,0:21:44.94:0,45,883	0/0:8,0:7:21.03:0,21,431	1/1:5,17:34:57:1985,57,0	0/0:29,0:29:84.23:0,84,2410	0/0:13,0:13:21.37:0,21,1047	0/0:34,0:34:96.25:0,96,2194	0/0:21,0:21:54.13:0,54,1509	0/0:34,0:34:93.27:0,93,2481	0/0:19,0:19:45.14:0,45,1420	0/0:19,0:19:48.14:0,48,1386	0/0:22,0:22:63.16:0,63,1825	0/0:21,0:21:60.18:0,60,1750	0/0:26,0:26:66.20:0,66,1997	1/1:4,15:25:30.10:1674,30,0	0/0:17,0:17:45.14:0,45,1328	1/1:2,0:12:21.07:331,21,0	0/0:15,0:15:45.10:0,45,1057	0/0:28,0:28:75.20:0,75,2147	0/0:13,0:13:36.11:0,36,1053	0/0:24,0:24:69.15:0,69,2067	0/0:31,0:31:84.26:0,84,2495	0/0:20,0:20:51.17:0,51,1717	0/0:33,0:33:84.25:0,84,2536	0/0:36,0:36:93.28:0,93,2663	0/0:23,0:23:60.19:0,60,1888	0/0:17,0:17:27.05:0,27,757
chr10	57829794	.	CT	C	1770.76	PASS	AB=0.769;AC=38;AF=0.679;AN=56;BaseQRankSum=6.692;DP=503;FS=5.215;HRun=16;HaplotypeScore=82.8131;InbreedingCoeff=0.1929;MQ=58.84;MQ0=6;MQRankSum=2.565;QD=4.12;ReadPosRankSum=4.394;VQSLOD=1.2546;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:20,1:41:4.25:59,4,0	0/1:5,2:10:1.85:48,0,2	0/0:7,0:7:0.06:0,0,19	0/0:9,0:6:2.74:0,3,12	1/1:5,0:19:16.35:49,16,0	0/0:14,0:15:23.99:0,24,217	0/1:11,2:13:5.60:6,0,146	1/1:15,11:27:33.57:191,34,0	1/1:5,12:18:0.23:106,0,0	1/1:5,7:15:23.70:125,24,0	0/1:2,4:8:1.17:31,0,1	0/1:18,2:22:15.31:15,0,93	0/1:9,0:10:9.71:10,0,58	0/0:18,1:18:23.80:0,24,282	1/1:10,9:21:8.36:133,8,0	1/1:7,11:18:22.44:131,22,0	1/1:22,17:44:16.91:284,17,0	1/1:12,7:18:17.32:107,17,0	1/1:11,2:14:9.39:54,9,0	0/1:7,5:12:16.41:40,0,16	1/1:12,5:21:22.20:113,22,0	0/1:6,3:9:13.21:42,0,13	0/1:9,1:11:18.94:19,0,52	0/0:20,1:22:1.58:0,2,143	1/1:5,7:13:22.45:131,22,0	1/1:17,6:25:6.70:101,7,0	1/1:12,10:24:4.17:118,4,0	1/1:5,2:5:2.84:18,3,0
chr10	57830124	.	C	CAAA	5370.57	PASS	AB=1.000;AC=37;AF=0.661;AN=56;BaseQRankSum=7.265;DP=478;FS=4.460;HRun=14;HaplotypeScore=105.8525;InbreedingCoeff=0.8209;MQ=72.32;MQ0=1;MQRankSum=-2.519;QD=15.94;ReadPosRankSum=-7.452;VQSLOD=1.5463;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:2,1:16:25.65:215,26,0	1/1:6,0:9:18.03:226,18,0	0/0:17,0:14:8.52:0,9,63	0/0:17,0:17:10.79:0,11,94	1/1:4,0:24:50.32:394,50,0	0/0:18,0:22:31.26:0,31,481	0/0:16,0:17:27.61:0,28,357	1/1:19,1:27:39.08:504,39,0	1/1:8,0:8:9.02:108,9,0	1/1:11,2:23:40.61:439,41,0	1/1:6,1:17:33:369,33,0	0/0:15,0:15:23.55:0,24,246	0/1:14,0:16:7.54:8,0,278	0/0:12,0:13:28.55:0,29,289	1/1:12,0:18:16.73:190,17,0	1/1:8,0:24:30.20:218,30,0	1/1:17,0:21:8.70:224,9,0	1/1:3,13:21:20.84:290,21,0	1/1:5,1:10:15.05:218,15,0	1/1:9,0:17:31.54:295,32,0	1/1:14,0:14:12.95:147,13,0	0/0:11,0:11:0.10:0,0,183	0/0:9,0:12:25.45:0,25,246	0/0:13,0:16:28.31:0,28,292	1/1:10,0:10:24.07:295,24,0	1/1:11,13:30:70.70:861,71,0	1/1:14,0:27:25.32:328,25,0	1/1:0,0:4:3.01:43,3,0
chr10	57830519	.	TGGA	T	4577.60	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=15.141;DP=743;FS=2.424;HRun=0;HaplotypeScore=122.5854;InbreedingCoeff=0.9980;MQ=90.32;MQ0=0;MQRankSum=-5.879;QD=44.02;ReadPosRankSum=5.102;VQSLOD=6.2917;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,41:42:99:1905,108,0	0/0:7,0:7:21.06:0,21,452	0/0:28,0:28:68.04:0,68,1618	0/0:30,0:30:90.31:0,90,2092	1/1:0,15:15:26.95:377,27,0	0/0:19,0:19:54.17:0,54,1232	0/0:36,0:36:99:0,105,2483	0/0:33,0:33:96.32:0,96,2231	0/0:33,0:33:93.32:0,93,2179	0/0:26,0:26:78.27:0,78,1832	0/0:13,0:13:36.12:0,36,852	0/0:31,0:31:90.30:0,90,2039	0/0:31,0:31:87.28:0,87,1991	0/0:24,0:24:69.24:0,69,1589	0/0:37,0:37:99:0,108,2510	1/1:0,28:28:75.26:1323,75,0	0/0:25,0:25:75.26:0,75,1747	1/1:0,19:19:57.15:972,57,0	0/0:26,0:26:78.27:0,78,1816	0/0:20,0:20:60.21:0,60,1388	0/0:66,0:66:99:0,196,4560	0/0:25,0:25:72.25:0,72,1671	0/0:21,0:21:63.20:0,63,1414	0/0:29,0:29:87.28:0,87,2006	0/0:21,0:21:63.22:0,63,1477	0/0:26,0:26:78.27:0,78,1838	0/0:24,0:24:72.24:0,72,1614	0/0:8,0:8:24.08:0,24,566
chr10	57832721	.	C	CT	1094.94	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-2.663;DP=671;FS=10.320;HRun=9;HaplotypeScore=69.5967;InbreedingCoeff=0.9153;MQ=81.18;MQ0=0;MQRankSum=-0.597;QD=16.59;ReadPosRankSum=0.136;VQSLOD=2.9159;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,24:30:28.89:427,29,0	0/0:11,0:11:29.98:0,30,260	0/0:18,0:17:22.99:0,23,237	0/0:22,0:20:5.82:0,6,216	1/1:5,29:36:54.82:790,55,0	0/0:32,2:34:47.68:0,48,634	0/0:23,0:23:68.95:0,69,590	0/0:33,0:33:74.97:0,75,651	0/0:22,0:22:50.95:0,51,443	0/0:35,0:35:80.94:0,81,701	0/0:18,0:18:41.93:0,42,356	0/0:19,0:19:50.99:0,51,442	0/0:23,0:23:62.91:0,63,539	0/0:26,0:26:67.52:0,68,576	0/0:27,0:28:79.55:0,80,654	0/0:20,0:20:56.98:0,57,495	0/0:27,0:27:68.96:0,69,599	0/0:16,0:16:47.95:0,48,410	0/0:22,0:23:28.77:0,29,418	0/0:28,2:30:8.57:0,9,527	0/0:16,0:16:41.97:0,42,360	0/0:29,0:29:74.90:0,75,643	0/0:18,0:18:41.98:0,42,365	0/0:15,0:15:41.99:0,42,365	0/0:22,0:22:62.98:0,63,547	0/0:28,0:28:74.96:0,75,648	0/0:35,1:36:71.75:0,72,843	0/0:13,0:13:38.99:0,39,337
chr10	57833229	.	G	GT	5492.69	PASS	AB=0.830;AC=29;AF=0.518;AN=56;BaseQRankSum=0.133;DP=582;FS=12.056;HRun=12;HaplotypeScore=84.9609;InbreedingCoeff=0.7745;MQ=68.11;MQ0=1;MQRankSum=-1.528;QD=16.30;ReadPosRankSum=-2.201;VQSLOD=4.1267;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:32:48.87:0,49,141	1/1:5,5:11:1.96:163,2,0	0/1:21,1:18:5.86:6,0,101	0/1:11,0:12:27.69:32,0,28	0/0:8,0:32:46.58:0,47,134	0/0:24,1:26:16.60:0,17,355	0/0:16,0:16:35.74:0,36,262	0/1:10,18:28:2.78:442,0,3	1/1:5,8:13:33:310,33,0	1/1:5,13:19:26:401,26,0	1/1:8,13:21:10.57:345,11,0	0/0:14,0:15:34.81:0,35,245	0/0:18,0:20:43.75:0,44,310	0/0:17,0:17:12.53:0,13,255	1/1:11,12:23:22.89:364,23,0	0/0:18,0:19:49.76:0,50,356	1/1:11,12:24:47.86:434,48,0	0/0:21,0:21:48.11:0,48,344	1/1:9,13:22:29.17:444,29,0	1/1:8,14:22:45.02:428,45,0	1/1:6,8:14:8.38:235,8,0	0/0:20,0:20:38.70:0,39,284	0/0:14,0:15:28.87:0,29,203	0/0:11,0:12:25.88:0,26,181	1/1:9,19:27:60.20:562,60,0	1/1:22,16:38:44.60:575,45,0	1/1:13,14:27:16.19:459,16,0	1/1:1,11:12:30.05:292,30,0
chr10	57833296	.	A	AT	8543.72	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=8.914;DP=568;FS=10.002;HRun=8;HaplotypeScore=83.6510;InbreedingCoeff=0.9954;MQ=77.54;MQ0=0;MQRankSum=-1.748;QD=28.01;ReadPosRankSum=-0.198;VQSLOD=4.5193;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:57.79:0,58,505	1/1:0,5:5:14.98:156,15,0	0/0:17,0:17:32.99:0,33,295	0/0:19,0:18:15.93:0,16,219	0/0:28,0:28:81.02:0,81,736	0/0:21,0:22:59.05:0,59,524	0/0:15,0:15:32.99:0,33,298	1/1:5,16:21:51.10:564,51,0	1/1:2,9:11:27.08:312,27,0	1/1:6,29:35:90.72:1023,91,0	1/1:5,21:26:66.19:753,66,0	0/0:27,0:27:72.01:0,72,651	0/0:23,0:23:60.01:0,60,544	0/0:22,0:22:57.01:0,57,519	1/1:3,27:31:78:863,78,0	0/0:17,0:17:40.81:0,41,356	1/1:7,14:21:48.10:528,48,0	0/0:15,0:15:44.94:0,45,395	1/1:4,11:15:33.10:380,33,0	1/1:4,23:27:66.19:751,66,0	1/1:3,9:12:29.96:306,30,0	0/0:14,0:14:42:0,42,379	0/0:15,0:15:45:0,45,404	0/0:8,0:8:24.01:0,24,220	1/1:7,18:25:57.16:645,57,0	1/1:8,32:40:99:1150,102,0	1/1:1,16:17:45.07:502,45,0	1/1:4,15:19:54.13:609,54,0
chr10	57835764	.	G	GTCCTTCCT	8675.71	PASS	AB=1.000;AC=37;AF=0.661;AN=56;BaseQRankSum=2.811;DP=436;FS=3.568;HRun=0;HaplotypeScore=135.1805;InbreedingCoeff=0.1944;MQ=62.34;MQ0=3;MQRankSum=-5.661;QD=23.58;ReadPosRankSum=-4.670;VQSLOD=3.1308;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:21,0:21:79.33:79,0,501	1/1:9,0:9:21.07:758,21,0	0/0:19,0:13:7.55:0,8,182	0/0:20,0:9:12.75:0,13,105	0/1:21,0:21:99:106,0,570	0/1:22,0:22:30.47:30,0,648	0/1:17,0:17:51.87:52,0,354	1/1:23,0:22:23.79:312,24,0	1/1:6,0:7:0.21:237,0,0	1/1:16,0:16:27.02:752,27,0	1/1:15,0:15:21.05:514,21,0	0/1:18,0:18:99:174,0,433	0/0:10,0:10:30.07:0,30,637	0/0:7,0:7:15.05:0,15,290	1/1:10,0:10:9.03:291,9,0	0/1:10,0:10:99:137,0,219	1/1:19,0:19:24.87:663,25,0	0/1:15,0:15:29.69:30,0,279	1/1:18,0:18:20.20:400,20,0	1/1:18,0:18:25.49:690,25,0	1/1:7,0:7:10.21:164,10,0	0/1:5,0:5:65.73:70,0,66	0/1:16,0:16:92.26:92,0,379	0/0:12,0:12:18.95:0,19,280	1/1:22,0:22:38.58:1126,39,0	1/1:21,0:21:33.57:885,34,0	1/1:19,3:26:9.83:912,10,0	1/1:12,0:12:4.53:201,5,0
chr10	57835773	.	T	TCC	700.45	PASS	AB=0.848;AC=13;AF=0.232;AN=56;BaseQRankSum=9.252;DP=432;FS=3.244;HRun=0;HaplotypeScore=101.2200;InbreedingCoeff=-0.3105;MQ=56.82;MQ0=4;MQRankSum=-2.768;QD=3.37;ReadPosRankSum=1.911;VQSLOD=2.4040;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:53.95:0,54,788	0/1:2,7:9:40.78:103,0,41	0/0:18,0:10:21.56:0,22,231	0/0:19,0:7:5.70:0,6,168	0/0:26,0:26:54.12:0,54,833	0/0:20,0:20:48.03:0,48,748	0/0:16,0:16:48.08:0,48,674	0/1:25,0:23:63.48:63,0,266	0/1:6,1:7:34.27:34,0,98	0/1:17,1:18:15.87:16,0,211	0/1:11,3:14:67.29:67,0,103	0/0:17,0:17:17.39:0,17,628	0/0:11,0:11:33.10:0,33,514	0/0:6,0:6:14.94:0,15,245	0/1:9,1:10:18:18,0,97	0/0:9,0:10:12.90:0,13,290	0/1:13,3:16:57.02:57,0,198	0/0:17,0:17:47.55:0,48,529	0/1:17,2:19:34.12:34,0,226	0/1:13,4:17:87.65:88,0,159	0/1:7,1:8:8.30:8,0,83	0/0:6,0:6:14.85:0,15,156	0/0:13,0:13:39.10:0,39,575	0/0:12,0:12:29.88:0,30,404	0/1:12,7:19:99:144,0,115	0/1:17,4:21:99:123,0,208	0/1:22,3:25:97.74:98,0,261	0/0:10,1:11:10.19:0,10,172
chr10	57835774	.	T	TTCCTTC	4226.18	PASS	AB=0.862;AC=24;AF=0.429;AN=56;BaseQRankSum=7.582;DP=458;FS=9.144;HRun=0;HaplotypeScore=119.0960;InbreedingCoeff=-0.7343;MQ=56.46;MQ0=4;MQRankSum=-4.386;QD=10.73;ReadPosRankSum=1.708;VQSLOD=3.3474;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:17,0:27:8.88:9,0,620	0/1:2,7:9:16.21:443,0,16	0/1:18,0:10:15.74:16,0,156	0/0:20,0:7:8.99:0,9,142	0/1:13,0:26:74.85:75,0,676	0/1:17,0:30:16.50:16,0,677	0/1:16,0:16:63.11:63,0,470	0/0:27,0:25:13.88:0,14,305	0/1:6,1:7:97.56:138,0,98	0/1:17,1:18:99:269,0,143	0/1:11,3:14:99:239,0,119	0/1:17,0:17:16.55:17,0,606	0/0:11,0:11:33.10:0,33,703	0/0:6,0:6:14.63:0,15,298	0/1:9,1:10:56.47:193,0,56	0/1:6,0:11:86.05:86,0,266	0/1:16,3:19:99:310,0,155	0/1:17,0:17:95.89:96,0,320	0/1:20,2:21:99:255,0,133	0/1:13,4:17:99:355,0,171	0/1:7,1:8:55.42:55,0,84	0/1:6,0:6:29.21:29,0,94	0/1:13,0:13:15.11:15,0,444	0/1:12,0:12:5.50:6,0,303	0/1:12,6:19:64.75:578,0,65	0/1:17,0:21:99:442,0,192	0/1:21,3:25:99:456,0,216	0/1:10,0:11:66.16:66,0,143
chr10	57836736	.	TTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	T	650.89	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=4.376;DP=549;FS=0.000;HRun=0;HaplotypeScore=310.4064;InbreedingCoeff=0.6985;MQ=50.48;MQ0=47;MQRankSum=0.938;QD=9.30;ReadPosRankSum=1.242;VQSLOD=1.8827;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:14,19:31:3.01:206,3,0	0/0:6,0:5:9.03:0,9,460	0/0:18,0:3:2.84:0,3,14	0/0:17,0:6:0:0,0,0	1/1:10,9:20:14.04:331,14,0	0/0:19,0:17:20.44:0,20,1816	0/0:23,0:19:24.98:0,25,1486	0/0:19,0:16:12.04:0,12,408	0/0:17,0:15:32.14:0,32,2218	0/0:23,0:21:30.10:0,30,2039	0/0:12,0:12:14.44:0,14,1357	0/0:22,0:21:36.72:0,37,2639	0/0:19,0:19:35.75:0,36,2799	0/0:17,0:15:17.81:0,18,1463	0/0:22,0:22:33.28:0,33,2165	0/0:12,0:11:18.06:0,18,950	0/0:29,0:27:57.16:0,57,3402	1/1:10,7:14:3.01:230,3,0	0/0:22,0:20:22.83:0,23,1429	0/0:8,0:8:12.04:0,12,737	0/0:30,0:28:38.65:0,39,3301	0/0:11,0:10:9.19:0,9,674	0/0:18,0:18:12.36:0,12,932	0/0:36,0:30:56:0,56,4967	0/0:14,0:14:20.99:0,21,1184	0/0:27,0:26:54.16:0,54,3237	0/0:22,0:22:53.98:0,54,4289	0/0:9,0:11:14.31:0,14,855
chr10	57837813	.	G	GAT	2237.51	PASS	AB=0.795;AC=25;AF=0.463;AN=54;BaseQRankSum=-5.477;DP=263;FS=10.811;HRun=0;HaplotypeScore=43.7321;InbreedingCoeff=0.0276;MQ=81.45;MQ0=0;MQRankSum=1.478;QD=11.42;ReadPosRankSum=-0.514;VQSLOD=1.7169;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:8,0:7:0:0,0,0	1/1:1,4:5:6.02:95,6,0	1/1:6,0:6:1.25:3,1,0	0/0:10,0:8:2.90:0,3,16	./.	0/1:9,1:16:21.14:21,0,149	0/0:4,0:4:3.01:0,3,35	0/1:20,10:30:99:429,0,104	0/1:3,4:7:23.18:130,0,23	1/1:5,4:10:11.97:159,12,0	0/1:6,1:8:5.13:63,0,5	0/0:4,0:5:14.84:0,15,132	0/0:10,0:11:20.87:0,21,213	0/0:3,0:3:9.03:0,9,106	1/1:2,2:4:6.02:95,6,0	0/0:4,0:17:25.57:0,26,126	0/1:8,15:27:58.59:520,0,59	1/1:7,0:7:3.01:38,3,0	0/1:8,3:12:34.93:121,0,35	0/1:5,0:5:17:17,0,29	1/1:3,1:4:3.01:47,3,0	0/0:6,0:6:3.01:0,3,35	0/0:3,0:5:5.68:0,6,28	0/0:4,0:4:8.97:0,9,80	1/1:8,6:14:15.05:237,15,0	0/1:7,4:11:99:140,0,114	0/1:8,6:14:81.85:212,0,82	0/1:4,4:8:46.51:69,0,47
chr10	57838887	.	G	GA	3847.12	PASS	AB=0.763;AC=24;AF=0.429;AN=56;BaseQRankSum=-7.022;DP=490;FS=0.395;HRun=12;HaplotypeScore=61.4085;InbreedingCoeff=0.6072;MQ=76.69;MQ0=1;MQRankSum=0.914;QD=15.64;ReadPosRankSum=-0.124;VQSLOD=4.4418;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:23:55.67:0,56,400	0/1:10,1:11:5.38:5,0,125	0/0:16,0:11:8.49:0,8,54	0/0:15,0:14:6.86:0,7,40	0/0:24,0:26:34.29:0,34,356	0/0:27,0:29:23.95:0,24,356	0/0:18,0:18:44.73:0,45,328	0/0:24,4:29:12.64:0,13,369	1/1:3,8:11:23.98:222,24,0	1/1:5,9:14:7.91:210,8,0	0/1:7,17:24:11.62:376,0,12	0/0:14,0:14:32.73:0,33,235	0/0:18,1:19:15.49:0,15,273	0/1:9,1:10:11.28:11,0,91	1/1:5,16:21:39.06:380,39,0	0/0:13,0:13:32.78:0,33,238	0/0:14,1:16:11.64:0,12,239	0/1:6,9:16:15.71:202,0,16	1/1:1,21:23:43.98:564,44,0	1/1:9,14:23:3.49:336,3,0	1/1:4,3:7:6.01:58,6,0	0/0:3,0:3:8.95:0,9,66	0/0:13,0:13:18.33:0,18,132	0/0:10,0:10:26.83:0,27,197	1/1:7,22:29:0.37:489,0,0	1/1:7,15:24:28.75:374,29,0	1/1:5,19:25:31.80:459,32,0	1/1:2,5:8:17.86:160,18,0
chr10	57839627	.	TTGTGTGTGTGTG	T	125.95	PASS	AB=0.656;AC=1;AF=0.018;AN=56;BaseQRankSum=1.452;DP=544;FS=3.021;HRun=0;HaplotypeScore=182.9210;InbreedingCoeff=0.2168;MQ=60.03;MQ0=9;MQRankSum=-2.167;QD=6.00;ReadPosRankSum=-0.940;VQSLOD=2.7429;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:21.03:0,21,303	0/0:5,0:5:9.03:0,9,195	0/0:21,0:13:8.98:0,9,89	0/0:13,0:8:9.03:0,9,166	0/0:15,0:14:18.03:0,18,548	0/0:20,0:24:42.13:0,42,1494	0/0:25,0:25:51.16:0,51,1758	0/0:44,0:42:63.68:0,64,1337	0/0:17,0:17:21.04:0,21,423	0/0:18,0:18:37.01:0,37,916	0/0:14,0:14:12.02:0,12,249	0/0:14,0:14:31.66:0,32,1244	0/0:11,0:11:24.07:0,24,874	0/0:14,0:14:27.08:0,27,984	0/0:22,0:22:38.81:0,39,1038	0/0:19,0:19:39.13:0,39,1246	0/0:26,0:26:49.37:0,49,1096	0/1:10,11:21:6.08:200,0,6	0/0:22,0:19:39.04:0,39,953	0/0:14,0:14:30.10:0,30,790	0/0:28,0:28:36.02:0,36,879	0/0:14,0:14:27.09:0,27,1152	0/0:17,0:17:33.11:0,33,1410	0/0:25,0:26:51.14:0,51,1928	0/0:12,0:12:21.07:0,21,543	0/0:18,0:17:24.08:0,24,701	0/0:13,0:13:27.08:0,27,618	0/0:13,0:13:27.07:0,27,658
chr10	57839659	.	GTCTGTC	G	4937.08	PASS	AB=0.870;AC=19;AF=0.339;AN=56;BaseQRankSum=1.700;DP=526;FS=11.346;HRun=0;HaplotypeScore=122.9606;InbreedingCoeff=-0.0041;MQ=54.24;MQ0=14;MQRankSum=1.094;QD=16.79;ReadPosRankSum=-0.141;VQSLOD=3.8213;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:37:9.03:0,9,144	1/1:5,0:5:15.02:161,15,0	0/1:7,0:4:2.50:3,0,68	0/0:11,0:7:19.99:0,20,239	0/0:15,0:14:17.95:0,18,265	0/0:23,0:23:29.26:0,29,858	0/0:19,0:19:45.14:0,45,927	0/1:32,0:28:28.29:435,0,28	0/1:7,0:8:3.87:134,0,4	0/1:9,12:22:9.07:540,0,9	0/1:2,9:12:20.62:21,0,28	0/0:15,0:15:34.35:0,34,859	0/0:12,0:12:30.10:0,30,712	0/0:20,0:19:2.35:0,2,985	1/1:16,1:20:13.74:536,14,0	0/1:23,0:23:61.63:62,0,218	0/1:20,0:23:48.04:488,0,48	0/0:20,0:20:15.21:0,15,309	0/1:12,8:16:53.73:125,0,54	0/1:18,0:20:4.72:381,0,5	0/1:29,0:30:56.92:295,0,57	0/0:15,0:15:36.06:0,36,887	0/0:16,0:16:42.14:0,42,981	0/0:25,0:24:51.18:0,51,1216	1/1:14,0:15:0.61:280,1,0	0/1:22,0:21:7.04:690,0,7	0/1:15,0:17:9.37:435,0,9	0/1:15,0:16:46.81:352,0,47
chr10	57839663	.	GTC	G	2365.95	PASS	AB=0.949;AC=17;AF=0.304;AN=56;BaseQRankSum=10.304;DP=526;FS=19.603;HRun=0;HaplotypeScore=101.3492;InbreedingCoeff=-0.1043;MQ=55.50;MQ0=13;MQRankSum=3.262;QD=8.27;ReadPosRankSum=3.923;VQSLOD=1.4372;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:39:9.03:0,9,172	1/1:6,1:7:16.24:154,16,0	0/0:7,0:5:12.77:0,13,140	0/0:11,0:7:18.95:0,19,302	0/0:19,0:16:23.68:0,24,251	0/0:22,0:22:51.10:0,51,782	0/0:18,0:18:48.14:0,48,782	0/1:31,0:27:99:183,0,220	0/1:9,1:10:6.57:86,0,7	0/1:20,1:21:52.48:215,0,52	0/1:10,1:11:20.13:20,0,37	0/0:15,0:15:33.58:0,34,590	0/0:11,0:11:30.10:0,30,543	0/0:20,0:18:41.65:0,42,761	1/1:16,2:19:0.51:258,1,0	0/1:21,0:21:10.55:11,0,206	0/1:19,3:22:33:295,0,33	0/0:21,0:21:36:0,36,538	0/1:19,0:15:35.73:36,0,156	0/1:19,1:20:27.77:222,0,28	0/1:30,2:31:74.31:194,0,74	0/0:17,0:17:38.92:0,39,670	0/0:16,0:16:42.14:0,42,760	0/0:23,0:22:60.12:0,60,946	0/1:15,1:16:4.03:165,0,4	0/1:22,1:21:22.46:350,0,22	0/1:17,1:18:22.33:187,0,22	0/1:15,1:16:67.38:156,0,67
chr10	57844175	.	T	TA	815.54	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=-0.360;DP=372;FS=0.000;HRun=9;HaplotypeScore=53.7054;InbreedingCoeff=0.7493;MQ=76.24;MQ0=1;MQRankSum=-1.530;QD=10.07;ReadPosRankSum=-2.212;VQSLOD=1.4254;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,10:15:18.01:186,18,0	0/0:5,0:5:12:0,12,104	0/0:22,0:15:18.75:0,19,133	0/1:31,0:24:11.78:12,0,34	1/1:6,17:23:48.06:515,48,0	0/0:4,0:4:8.99:0,9,78	0/0:5,0:5:15:0,15,130	0/0:22,0:22:50.96:0,51,440	0/0:14,0:14:38.97:0,39,336	0/0:14,0:14:32.99:0,33,286	0/0:16,0:16:41.98:0,42,363	0/0:8,0:8:20.99:0,21,182	0/0:7,0:7:20.87:0,21,171	0/0:9,0:9:23.36:0,23,190	0/0:12,0:12:32.98:0,33,286	0/0:15,0:15:41.98:0,42,362	0/0:12,0:11:15.85:0,16,131	1/1:2,8:10:24:249,24,0	0/0:13,0:13:26.97:0,27,234	0/0:24,0:24:68.98:0,69,598	0/0:5,0:5:6:0,6,52	0/0:10,0:10:29.94:0,30,252	0/0:10,0:10:29.99:0,30,260	0/0:3,0:3:8.98:0,9,74	0/0:19,0:19:47.96:0,48,411	0/0:19,0:19:47.97:0,48,417	0/0:19,0:19:53.99:0,54,468	0/0:3,0:3:9:0,9,78
chr10	57844689	.	C	CAAAAT	24518.51	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-1.290;DP=628;FS=1.875;HRun=0;HaplotypeScore=115.6868;InbreedingCoeff=0.9820;MQ=65.39;MQ0=0;MQRankSum=-14.915;QD=65.38;ReadPosRankSum=0.450;VQSLOD=5.8114;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,25:29:66.22:1874,66,0	1/1:0,5:6:6.02:184,6,0	0/0:17,0:16:36.09:0,36,664	0/0:20,0:20:36.09:0,36,590	1/1:3,19:22:48.16:1265,48,0	0/0:23,0:23:60.21:0,60,1259	0/0:36,0:36:99:0,102,2099	1/1:9,22:34:90.26:2386,90,0	1/1:3,19:23:54.19:1610,54,0	1/1:5,14:20:39.13:1147,39,0	1/1:5,16:21:57.19:1613,57,0	0/0:25,0:25:63.22:0,63,1318	0/0:28,0:28:75.24:0,75,1528	0/0:35,0:35:93.30:0,93,1902	1/1:9,20:29:60.20:1774,60,0	1/1:4,22:26:60.20:1841,60,0	1/1:4,29:33:75.26:2249,75,0	1/1:5,8:14:34.67:927,35,0	1/1:6,9:15:36.12:1031,36,0	1/1:5,13:18:39.13:1102,39,0	1/1:4,8:12:15.05:417,15,0	0/0:23,0:23:63.19:0,63,1268	0/0:17,0:17:45.15:0,45,936	0/0:28,0:28:84.29:0,84,1737	1/1:3,10:15:30.10:901,30,0	1/1:2,18:20:57.19:1616,57,0	1/1:5,20:26:51.17:1566,51,0	1/1:0,12:12:33.11:1013,33,0
chr10	57845029	.	T	TGTGTTAATGAG	31792.32	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=8.598;DP=497;FS=44.817;HRun=0;HaplotypeScore=177.3416;InbreedingCoeff=0.9948;MQ=71.04;MQ0=0;MQRankSum=-15.778;QD=105.27;ReadPosRankSum=-1.873;VQSLOD=3.0693;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:16,7:23:39.13:1916,39,0	1/1:9,5:14:33.11:1590,33,0	0/0:9,0:9:18.04:0,18,449	0/0:18,0:18:39.13:0,39,1263	1/1:7,6:13:21.07:815,21,0	0/0:16,0:16:36.12:0,36,1191	0/0:19,0:19:51.11:0,51,1510	1/1:22,2:25:63.22:3178,63,0	1/1:13,6:20:54.14:2642,54,0	1/1:14,6:23:69.17:2862,69,0	1/1:7,6:13:15.05:693,15,0	0/0:26,0:26:75.26:0,75,2451	0/0:20,0:20:51.18:0,51,1699	0/0:26,0:26:63.20:0,63,1988	1/1:8,8:17:39.13:1859,39,0	0/0:22,0:22:57.20:0,57,1856	1/1:12,1:14:33.11:1765,33,0	1/1:7,5:13:24.08:1284,24,0	1/1:9,2:13:33.02:1500,33,0	1/1:11,4:15:27.09:1157,27,0	1/1:12,8:21:33.10:1548,33,0	0/0:8,0:8:24.08:0,24,815	0/0:11,0:11:33.11:0,33,934	0/0:20,0:20:54.19:0,54,1762	1/1:13,4:18:30.10:1469,30,0	1/1:12,8:21:57.17:2791,57,0	1/1:13,13:26:60.21:3280,60,0	1/1:5,5:11:27.09:1444,27,0
chr10	57847671	.	TCCCCCCCCCCC	T	13144.68	PASS	AB=0.634;AC=35;AF=0.625;AN=56;BaseQRankSum=4.758;DP=479;FS=29.879;HRun=19;HaplotypeScore=161.1605;InbreedingCoeff=0.7418;MQ=61.95;MQ0=11;MQRankSum=-7.064;QD=40.82;ReadPosRankSum=8.046;VQSLOD=0.0215;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,0:22:1.72:234,2,0	1/1:5,5:9:8.87:256,9,0	0/0:58,0:17:9.38:0,9,690	0/0:49,0:16:27.69:0,28,513	0/1:11,0:26:8.83:227,0,9	0/0:8,0:8:15.04:0,15,436	0/0:10,0:11:15.02:0,15,456	1/1:22,7:29:19.65:581,20,0	1/1:3,16:19:44.98:1285,45,0	1/1:4,7:11:23.88:685,24,0	1/1:5,7:12:17.95:463,18,0	0/0:6,0:6:7.61:0,8,339	0/0:6,0:6:15.05:0,15,475	0/0:4,0:4:9.03:0,9,374	1/1:2,23:25:63.09:1753,63,0	1/1:4,0:30:41.27:892,41,0	1/1:4,8:12:14.88:382,15,0	1/1:2,0:4:2.98:23,3,0	1/1:8,0:8:2.49:70,2,0	1/1:3,17:20:47.91:1282,48,0	1/1:8,7:15:15.19:318,15,0	0/0:4,0:4:5.99:0,6,139	0/0:3,0:3:3.01:0,3,126	0/0:6,0:6:7.27:0,7,153	1/1:6,9:15:26.71:771,27,0	1/1:7,20:27:59.65:1525,60,0	1/1:4,29:33:72.37:2057,72,0	1/1:0,4:4:12.04:341,12,0
chr10	57849057	.	T	TC	20425.41	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-15.884;DP=743;FS=1.256;HRun=1;HaplotypeScore=69.7596;InbreedingCoeff=0.9912;MQ=78.81;MQ0=0;MQRankSum=-2.723;QD=41.10;ReadPosRankSum=2.176;VQSLOD=5.5301;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,41:43:99:1662,111,0	1/1:0,10:10:27.09:404,27,0	0/0:15,0:15:45.11:0,45,548	0/0:18,0:18:38.55:0,39,509	1/1:0,28:28:78.26:1162,78,0	0/0:28,0:28:84.27:0,84,1090	0/0:31,0:31:93.30:0,93,1207	1/1:2,25:27:75.24:1103,75,0	1/1:2,24:26:72.24:1073,72,0	1/1:0,24:24:72.24:1078,72,0	1/1:0,19:19:45.15:673,45,0	0/0:20,0:20:60.20:0,60,779	0/0:25,0:25:69.21:0,69,880	0/0:46,0:46:99:0,138,1791	1/1:0,37:37:99:1663,111,0	1/1:0,32:32:93.31:1390,93,0	1/1:0,29:29:75.25:1124,75,0	1/1:0,25:25:66.22:989,66,0	1/1:1,21:22:60.14:875,60,0	1/1:0,17:17:51.17:764,51,0	1/1:3,73:76:99:3145,211,0	0/0:14,0:14:42.14:0,42,545	0/0:14,0:14:42.14:0,42,545	0/0:35,0:35:99:0,105,1348	1/1:1,12:13:36.12:539,36,0	1/1:0,29:29:87.25:1258,87,0	1/1:2,32:35:93.31:1389,93,0	1/1:0,5:5:9.03:135,9,0
chr10	57849361	.	C	CA	1570.25	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=0.031;DP=518;FS=3.284;HRun=9;HaplotypeScore=80.9999;InbreedingCoeff=0.9754;MQ=60.79;MQ0=11;MQRankSum=-4.845;QD=20.66;ReadPosRankSum=-0.380;VQSLOD=4.0316;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,18:20:48:500,48,0	0/0:5,0:5:15:0,15,130	0/0:20,0:11:12.05:0,12,157	0/0:22,0:15:19.72:0,20,141	1/1:10,22:31:39.97:631,40,0	0/0:18,0:18:47.99:0,48,417	0/0:20,0:20:53.97:0,54,469	0/0:24,0:22:56.93:0,57,487	0/0:17,0:17:41.98:0,42,364	0/0:23,0:23:52.76:0,53,444	0/0:24,0:24:59.97:0,60,519	0/0:14,0:14:32.97:0,33,283	0/0:12,0:12:32.98:0,33,286	0/0:18,1:19:20.89:0,21,409	0/0:17,0:17:35.97:0,36,312	0/0:14,0:15:38.03:0,38,319	0/0:34,0:34:80.95:0,81,702	1/1:6,16:22:54.10:582,54,0	0/0:22,0:20:50.99:0,51,442	0/0:11,0:11:29.98:0,30,258	0/0:17,0:17:44.99:0,45,391	0/0:7,0:7:20.97:0,21,177	0/0:15,0:15:41.93:0,42,354	0/0:13,0:13:35.97:0,36,306	0/0:21,0:22:65.02:0,65,550	0/0:21,0:21:59.96:0,60,516	0/0:23,0:23:56.95:0,57,489	0/0:6,0:6:18:0,18,155
chr10	57849380	.	A	AAACCAACC	4684.72	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=-0.408;DP=529;FS=0.578;HRun=0;HaplotypeScore=151.1248;InbreedingCoeff=0.8486;MQ=62.90;MQ0=0;MQRankSum=-8.776;QD=49.31;ReadPosRankSum=-2.840;VQSLOD=4.2406;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:15,8:23:40.62:1338,41,0	0/0:6,0:6:12.04:0,12,311	0/0:19,0:16:24.54:0,25,515	0/1:17,0:14:1.46:1,0,205	1/1:17,16:34:60.14:2087,60,0	0/0:18,0:18:48.15:0,48,1191	0/0:21,0:21:51.13:0,51,1162	0/0:34,0:34:69.22:0,69,1641	0/0:13,0:13:33.11:0,33,855	0/0:26,0:26:66.23:0,66,1686	0/0:26,0:26:69.21:0,69,1614	0/0:16,0:16:45.15:0,45,1114	0/0:14,0:14:39.10:0,39,953	0/0:18,0:18:48.16:0,48,1236	0/0:10,0:10:12.04:0,12,276	0/0:11,0:11:27.08:0,27,619	0/0:33,0:33:87.30:0,87,2211	1/1:11,8:21:33.11:1258,33,0	0/0:21,0:21:29.45:0,29,656	0/0:11,0:11:24.07:0,24,569	0/0:19,0:19:33.11:0,33,816	0/0:5,0:5:6.01:0,6,103	0/0:16,0:16:33.10:0,33,802	0/0:12,0:12:27.06:0,27,593	0/0:26,0:26:45.13:0,45,1087	0/0:26,0:26:66.23:0,66,1675	0/0:24,0:24:51.16:0,51,1205	0/0:9,0:9:27.09:0,27,699
chr10	57852341	.	TA	T	7700.84	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=11.629;DP=483;FS=16.422;HRun=9;HaplotypeScore=48.4524;InbreedingCoeff=0.9766;MQ=70.54;MQ0=0;MQRankSum=-1.770;QD=22.26;ReadPosRankSum=0.025;VQSLOD=3.6433;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,16:18:42.02:384,42,0	1/1:2,5:7:12:110,12,0	0/0:9,0:9:12.09:0,12,138	0/0:4,0:4:11.39:0,11,100	1/1:4,24:28:66.02:604,66,0	0/0:21,0:21:48.14:0,48,553	0/0:11,0:11:33.06:0,33,358	1/1:5,27:32:77.99:707,78,0	1/1:2,10:12:30.01:275,30,0	1/1:4,20:24:60.03:549,60,0	1/1:5,16:21:42.01:384,42,0	0/0:13,0:13:33.10:0,33,381	0/0:23,0:23:66.18:0,66,752	0/0:21,0:21:54.15:0,54,614	1/1:2,19:21:51.03:467,51,0	1/1:2,20:22:22.41:460,22,0	1/1:0,21:21:63.03:577,63,0	1/1:4,9:13:27.01:247,27,0	1/1:4,11:15:33.01:302,33,0	1/1:3,30:33:87.04:796,87,0	1/1:0,6:6:15.01:137,15,0	0/0:13,0:13:39.12:0,39,449	0/0:16,0:16:45.08:0,45,504	0/0:6,0:6:18.05:0,18,208	1/1:1,20:21:54.03:494,54,0	1/1:0,19:19:57.03:521,57,0	1/1:3,26:29:63.03:577,63,0	1/1:0,4:4:12.01:110,12,0
chr10	57852545	.	CCCG	C	14529.89	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=13.685;DP=625;FS=2.115;HRun=0;HaplotypeScore=98.1327;InbreedingCoeff=0.9987;MQ=82.64;MQ0=0;MQRankSum=-5.641;QD=45.84;ReadPosRankSum=1.193;VQSLOD=6.8196;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,99,2259	1/1:0,9:9:27.09:463,27,0	0/0:16,0:16:48.15:0,48,1087	0/0:23,0:22:62.45:0,62,1331	0/0:27,0:27:81.28:0,81,1902	0/0:22,0:22:63.22:0,63,1428	0/0:26,0:26:78.27:0,78,1820	1/1:1,36:37:99:1846,108,0	1/1:0,16:16:45.12:762,45,0	1/1:1,26:27:78.25:1339,78,0	1/1:0,19:19:51.17:886,51,0	0/0:17,0:17:51.18:0,51,1205	0/0:21,0:21:63.22:0,63,1457	0/0:25,0:25:75.26:0,75,1764	1/1:1,16:17:42.14:716,42,0	0/0:23,0:23:66.23:0,66,1560	1/1:4,27:31:81.24:1364,81,0	0/0:18,0:18:51.18:0,51,1191	1/1:2,20:22:57.19:981,57,0	1/1:1,31:32:90.27:1554,90,0	1/1:3,14:17:36.12:621,36,0	0/0:13,0:13:39.13:0,39,893	0/0:22,0:22:66.23:0,66,1535	0/0:21,0:21:60.21:0,60,1415	1/1:1,28:29:78.27:1376,78,0	1/1:1,19:20:60.21:1035,60,0	1/1:1,32:33:72.25:1270,72,0	1/1:0,8:8:18.06:318,18,0
chr10	57852992	.	A	AT	436.01	PASS	AB=0.783;AC=2;AF=0.036;AN=56;BaseQRankSum=7.972;DP=814;FS=1.835;HRun=0;HaplotypeScore=91.0139;InbreedingCoeff=-0.0376;MQ=89.83;MQ0=0;MQRankSum=7.064;QD=7.03;ReadPosRankSum=-4.658;VQSLOD=2.7539;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,150,2081	0/0:11,0:11:33.11:0,33,460	0/1:18,8:28:99:326,0,428	0/1:25,7:34:99:199,0,631	0/0:57,0:57:99:0,172,2374	0/0:25,0:25:69.23:0,69,964	0/0:38,0:38:99:0,111,1531	0/0:36,0:36:99:0,105,1453	0/0:24,0:24:72.24:0,72,1005	0/0:30,0:30:87.24:0,87,1194	0/0:26,0:26:75.24:0,75,1032	0/0:18,0:18:51.17:0,51,713	0/0:28,0:28:78.26:0,78,1088	0/0:22,0:22:66.22:0,66,923	0/0:35,0:35:99:0,105,1451	0/0:36,0:36:99:0,108,1494	0/0:26,0:26:78.26:0,78,1091	0/0:26,0:26:72.24:0,72,1005	0/0:25,0:25:72.23:0,72,978	0/0:32,0:32:93.31:0,93,1299	0/0:31,0:31:90.29:0,90,1241	0/0:26,0:26:78.26:0,78,1091	0/0:32,0:32:96.29:0,96,1306	0/0:28,0:28:84.28:0,84,1171	0/0:21,0:21:60.20:0,60,839	0/0:33,0:33:96.30:0,96,1311	0/0:31,0:31:93.31:0,93,1299	0/0:5,0:5:15.05:0,15,210
chr10	57855969	.	CA	C	7394.90	PASS	AB=1.000;AC=35;AF=0.625;AN=56;BaseQRankSum=17.442;DP=754;FS=2.302;HRun=2;HaplotypeScore=121.2376;InbreedingCoeff=0.9425;MQ=87.15;MQ0=0;MQRankSum=-2.266;QD=15.28;ReadPosRankSum=3.082;VQSLOD=5.0954;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,49:49:99:1830,141,0	1/1:15,0:15:32.35:104,32,0	0/0:26,0:26:72.24:0,72,1054	0/0:24,0:24:63.17:0,63,887	1/1:0,28:28:75.20:955,75,0	0/0:26,0:26:75.24:0,75,1104	0/0:28,0:28:81.26:0,81,1192	1/1:42,0:42:63.80:364,64,0	1/1:28,0:28:52.36:246,52,0	0/1:22,0:22:4.15:172,0,4	1/1:20,0:20:32.51:142,33,0	0/0:32,0:32:93.31:0,93,1390	0/0:35,0:35:99:0,102,1525	0/0:31,0:31:93.27:0,93,1332	1/1:40,0:40:89.50:330,89,0	1/1:1,34:35:93.26:1188,93,0	1/1:24,0:24:40.14:132,40,0	1/1:0,20:20:48.16:623,48,0	1/1:23,0:23:51.58:222,52,0	1/1:22,1:23:38.58:122,39,0	1/1:22,0:22:50.17:208,50,0	0/0:13,0:13:36.11:0,36,521	0/0:24,0:24:72.23:0,72,1057	0/0:31,0:31:93.29:0,93,1352	1/1:24,0:24:54.23:217,54,0	1/1:29,0:29:58.26:382,58,0	1/1:26,0:26:26.63:106,27,0	1/1:14,0:14:15.99:52,16,0
chr10	57856197	.	AAAC	A	6925.18	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=16.371;DP=651;FS=3.272;HRun=0;HaplotypeScore=152.3447;InbreedingCoeff=0.9681;MQ=80.02;MQ0=0;MQRankSum=-3.691;QD=16.77;ReadPosRankSum=1.642;VQSLOD=4.5240;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,30:35:78.23:1165,78,0	1/1:7,0:7:11.36:58,11,0	0/0:24,0:23:50.46:0,50,818	0/0:21,0:21:2.99:0,3,550	1/1:4,21:25:57.04:777,57,0	0/0:23,0:23:60.15:0,60,1134	0/0:20,0:20:57.16:0,57,1113	1/1:27,0:27:53.37:297,53,0	1/1:17,1:18:30.87:171,31,0	1/1:16,0:16:30.62:138,31,0	1/1:20,0:20:45.39:267,45,0	0/0:35,0:35:99:0,99,2025	0/0:30,0:30:75.23:0,75,1487	0/0:29,0:29:72.23:0,72,1454	1/1:38,1:39:78.55:388,79,0	1/1:3,26:29:66.11:1020,66,0	1/1:28,0:28:61.55:278,62,0	1/1:3,18:21:45.15:679,45,0	1/1:19,1:20:42.73:270,43,0	1/1:19,1:20:39.77:218,40,0	1/1:30,2:32:64.81:347,65,0	0/0:13,0:13:30.09:0,30,583	0/0:19,0:19:45.13:0,45,864	0/0:24,0:24:66.65:0,67,1242	1/1:16,1:17:32.55:190,33,0	1/1:18,0:18:39.66:205,40,0	1/1:28,1:29:64.39:332,64,0	1/1:12,0:12:27.86:125,28,0
chr10	57856204	.	AAC	A	11817.84	PASS	AB=0.853;AC=33;AF=0.589;AN=56;BaseQRankSum=16.536;DP=627;FS=4.645;HRun=0;HaplotypeScore=118.6195;InbreedingCoeff=0.7713;MQ=76.76;MQ0=0;MQRankSum=-3.107;QD=29.32;ReadPosRankSum=2.974;VQSLOD=6.6482;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:33,0:33:31.54:482,32,0	1/1:0,6:6:15:187,15,0	0/0:20,0:19:45.55:0,46,672	0/0:22,0:21:4.53:0,5,514	0/1:24,0:24:12.25:321,0,12	0/0:23,0:23:69.15:0,69,1025	0/0:20,0:20:60.16:0,60,957	1/1:1,24:25:74.53:932,75,0	1/1:2,13:15:33.07:476,33,0	1/1:1,13:14:39.11:559,39,0	1/1:8,13:21:57.21:747,57,0	0/0:35,0:35:99:0,102,1691	0/0:26,0:26:78.24:0,78,1284	0/0:26,0:26:78.24:0,78,1285	1/1:1,35:36:84.24:1258,84,0	0/1:33,0:33:71.69:364,0,72	1/1:0,30:30:69.23:1041,69,0	1/1:21,0:21:21.61:283,22,0	1/1:2,19:21:62.71:789,63,0	1/1:2,17:19:51.02:663,51,0	1/1:3,28:31:74.61:1032,75,0	0/0:12,0:12:33.09:0,33,507	0/0:17,0:17:51.12:0,51,776	0/0:23,0:23:66.16:0,66,1031	1/1:4,10:14:39.55:522,40,0	1/1:0,15:15:45.08:593,45,0	1/1:3,28:31:77.75:1102,78,0	0/1:3,11:14:7.11:466,0,7
chr10	57856205	.	AC	A	6247.45	PASS	AB=1.000;AC=33;AF=0.589;AN=56;BaseQRankSum=17.918;DP=621;FS=5.760;HRun=1;HaplotypeScore=126.2712;InbreedingCoeff=0.7878;MQ=76.29;MQ0=0;MQRankSum=-4.473;QD=15.70;ReadPosRankSum=3.437;VQSLOD=5.1437;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:33,0:33:26.27:333,26,0	1/1:6,0:6:13.93:89,14,0	0/0:19,0:18:45.89:0,46,564	0/0:22,0:21:29.74:0,30,455	0/1:24,0:24:43.39:232,0,43	0/0:23,0:23:69.15:0,69,851	0/0:20,0:20:60.17:0,60,775	1/1:24,1:25:71.48:534,71,0	1/1:14,0:14:32.58:224,33,0	1/1:13,0:13:38.22:264,38,0	1/1:19,1:20:59.20:460,59,0	0/0:36,0:36:99:0,105,1366	0/0:26,0:26:78.23:0,78,1026	0/0:26,0:26:78.24:0,78,1034	1/1:36,0:36:83.19:587,83,0	0/1:32,0:32:84.82:237,0,85	1/1:30,0:30:67.97:475,68,0	1/1:21,0:21:14.37:189,14,0	1/1:20,1:21:60.54:425,61,0	1/1:18,0:18:49.96:337,50,0	1/1:30,1:31:74.28:541,74,0	0/0:11,0:11:33.07:0,33,406	0/0:17,0:17:51.03:0,51,628	0/0:22,1:23:66.15:0,66,831	1/1:14,0:14:38.60:270,39,0	1/1:15,0:15:44.57:322,45,0	1/1:30,1:31:70.80:538,71,0	0/1:14,0:14:5.80:191,0,6
chr10	57856459	.	G	GTT	3767.98	PASS	AB=0.847;AC=37;AF=0.661;AN=56;BaseQRankSum=-2.083;DP=406;FS=5.711;HRun=12;HaplotypeScore=48.2162;InbreedingCoeff=0.4863;MQ=66.15;MQ0=7;MQRankSum=0.372;QD=11.85;ReadPosRankSum=-0.746;VQSLOD=1.1864;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:8,13:21:9.71:193,0,10	1/1:3,2:6:9.02:113,9,0	0/0:25,0:6:3.06:0,3,9	0/1:17,0:7:2.26:8,0,2	1/1:12,9:25:36.72:346,37,0	0/0:21,0:21:32.44:0,32,276	0/0:9,0:9:23.15:0,23,186	1/1:18,6:26:38.22:423,38,0	1/1:3,10:12:8.59:97,9,0	1/1:15,0:15:24.74:263,25,0	1/1:1,8:13:32.41:330,32,0	0/1:12,0:12:5.50:6,0,42	0/0:13,0:12:5.07:0,5,196	0/1:11,0:11:12.60:13,0,105	1/1:3,4:7:3.01:42,3,0	1/1:6,1:18:10.57:104,11,0	1/1:7,15:22:17.52:185,18,0	1/1:3,9:14:18.05:239,18,0	1/1:12,9:20:6.34:310,6,0	1/1:1,11:13:26.91:273,27,0	1/1:1,6:8:8.52:93,9,0	0/0:9,0:9:20.66:0,21,169	0/0:3,0:3:8.04:0,8,60	0/0:8,0:8:17.93:0,18,166	1/1:1,4:5:6.02:84,6,0	1/1:5,12:19:35.01:341,35,0	1/1:7,13:23:0.59:231,1,0	0/1:3,4:8:19.80:77,0,20
chr10	57856601	.	G	GA	4705.25	PASS	AB=0.563;AC=25;AF=0.463;AN=54;BaseQRankSum=-1.287;DP=298;FS=0.000;HRun=9;HaplotypeScore=51.0239;InbreedingCoeff=0.8779;MQ=65.66;MQ0=1;MQRankSum=-0.150;QD=27.84;ReadPosRankSum=-1.158;VQSLOD=4.3034;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:44.98:0,45,391	1/1:0,5:5:15.04:166,15,0	0/0:4,0:3:5.99:0,6,50	0/0:5,0:4:3.79:0,4,35	0/0:18,0:18:44.97:0,45,390	0/0:17,0:17:44.97:0,45,387	0/0:13,0:13:29.97:0,30,260	1/1:1,21:22:63.17:697,63,0	1/1:1,8:9:21.06:232,21,0	1/1:2,8:10:24.06:265,24,0	1/1:1,12:13:33.08:357,33,0	0/0:9,0:9:14.99:0,15,130	0/0:7,0:7:14.96:0,15,125	0/0:7,0:7:11.98:0,12,104	1/1:1,11:13:35.89:366,36,0	0/0:7,0:7:15:0,15,130	1/1:2,8:10:25.31:269,25,0	0/0:5,0:5:11.94:0,12,93	1/1:2,15:16:42.11:457,42,0	1/1:1,13:14:42.11:464,42,0	./.	0/0:3,0:3:5.99:0,6,52	0/0:6,0:6:18:0,18,156	0/0:5,0:5:12:0,12,104	1/1:4,11:15:30.08:332,30,0	1/1:0,14:14:39.10:430,39,0	1/1:2,15:18:45.07:476,45,0	0/1:2,7:9:2.03:195,0,2
chr10	57856633	.	A	AT	2368.63	PASS	AB=0.934;AC=33;AF=0.611;AN=54;BaseQRankSum=5.083;DP=362;FS=0.558;HRun=10;HaplotypeScore=92.7702;InbreedingCoeff=0.6908;MQ=64.35;MQ0=14;MQRankSum=-5.190;QD=8.81;ReadPosRankSum=-1.083;VQSLOD=2.2880;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:19,1:19:17.01:309,17,0	1/1:3,0:2:5.80:32,6,0	0/0:20,0:8:1.64:0,2,62	0/1:15,0:9:15.18:15,0,50	1/1:17,1:18:16.64:310,17,0	0/0:12,0:12:14.95:0,15,123	0/0:10,0:10:23.87:0,24,187	1/1:24,0:26:32.35:181,32,0	1/1:9,1:10:19.41:113,19,0	1/1:19,1:20:19.17:151,19,0	1/1:13,0:14:22.26:127,22,0	0/0:11,0:11:26.45:0,26,203	0/0:9,0:8:20.95:0,21,170	0/0:8,0:8:20.97:0,21,172	1/1:13,1:14:15.91:124,16,0	1/1:5,0:4:8.69:72,9,0	1/1:12,0:10:24.03:132,24,0	1/1:9,1:9:22.93:178,23,0	0/1:20,0:23:14.61:121,0,15	1/1:12,2:13:24.70:159,25,0	./.	0/0:5,0:5:8.98:0,9,73	0/0:8,0:8:20.47:0,20,157	0/0:9,0:9:11.94:0,12,94	1/1:11,3:14:26.61:232,27,0	1/1:20,0:18:17.63:110,18,0	1/1:16,0:16:13.37:100,13,0	0/1:10,0:11:8.33:104,0,8
chr10	57856642	.	TTC	T	654.84	PASS	AB=0.985;AC=24;AF=0.429;AN=56;BaseQRankSum=4.496;DP=376;FS=0.000;HRun=0;HaplotypeScore=83.9181;InbreedingCoeff=0.1860;MQ=58.68;MQ0=24;MQRankSum=-0.509;QD=2.40;ReadPosRankSum=-0.358;VQSLOD=1.0655;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:19,0:19:17.33:60,0,17	1/1:3,0:2:3.38:11,3,0	0/0:19,0:7:12.48:0,12,68	0/0:14,0:8:6.81:0,7,45	0/1:18,0:18:20.35:20,0,30	0/0:10,0:9:6.62:0,7,209	0/0:14,0:14:22.50:0,23,194	0/1:24,1:24:24.72:93,0,25	1/1:11,0:10:6.79:52,7,0	1/1:24,2:24:4.82:110,5,0	0/1:11,1:12:8.16:8,0,60	0/1:15,0:14:0.42:0,0,249	0/0:9,0:7:21.07:0,21,290	0/0:8,0:8:23.76:0,24,254	0/1:14,1:15:0.37:92,0,0	0/0:5,0:4:0.15:0,0,12	0/1:14,0:11:4.09:4,0,35	0/1:13,0:11:3.16:16,0,3	0/1:21,0:20:38.33:38,0,74	1/1:14,0:13:12.06:57,12,0	0/1:3,0:2:0:0,0,0	0/0:4,0:4:8.94:0,9,96	0/0:10,0:10:17.97:0,18,288	0/0:10,0:9:17.77:0,18,202	1/1:15,0:15:4.99:77,5,0	0/1:20,0:17:1.21:73,0,1	1/1:16,1:15:12.39:94,12,0	0/1:11,0:11:11.26:11,0,15
chr10	57856644	.	CT	C	981.74	PASS	AB=0.907;AC=23;AF=0.426;AN=54;BaseQRankSum=0.797;DP=369;FS=2.468;HRun=14;HaplotypeScore=75.7738;InbreedingCoeff=-0.0118;MQ=57.02;MQ0=27;MQRankSum=-3.470;QD=3.68;ReadPosRankSum=0.519;VQSLOD=0.8570;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:16,4:19:8.71:124,9,0	1/1:3,0:2:5.84:34,6,0	0/0:18,0:6:7.71:0,8,34	0/0:14,0:8:7.15:0,7,42	0/1:14,2:17:0.27:102,0,0	0/0:9,0:8:16.80:0,17,134	0/1:10,1:12:18.49:18,0,79	0/1:22,2:23:29.56:87,0,30	0/1:10,1:10:8.06:35,0,8	1/1:21,4:24:4.62:142,5,0	0/1:10,2:12:42.19:42,0,69	0/0:15,0:14:11.20:0,11,147	0/0:9,0:7:21.01:0,21,188	0/0:8,0:8:17.92:0,18,153	0/1:15,1:16:22.58:23,0,44	1/1:3,2:4:5.70:38,6,0	0/1:10,3:10:24.92:42,0,25	0/1:13,1:12:8.86:25,0,9	0/1:18,3:20:48.61:81,0,49	0/1:12,0:11:3.65:56,0,4	./.	0/0:4,0:4:5.84:0,6,42	0/0:12,0:10:23.37:0,23,205	0/0:9,0:8:17.85:0,18,150	0/1:14,1:15:14.77:91,0,15	0/1:15,4:16:7.73:104,0,8	1/1:13,3:14:4.46:73,4,0	0/1:11,0:11:30.99:31,0,51
chr10	57863122	.	TACACACACACAC	T	5660.99	PASS	AB=0.679;AC=28;AF=0.500;AN=56;BaseQRankSum=1.992;DP=759;FS=31.033;HRun=0;HaplotypeScore=266.2068;InbreedingCoeff=0.8027;MQ=54.35;MQ0=5;MQRankSum=-7.074;QD=18.09;ReadPosRankSum=1.749;VQSLOD=2.7374;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:54:71.81:0,72,1884	1/1:4,7:11:11.06:231,11,0	0/0:25,0:11:5.91:0,6,52	0/0:37,0:21:20.97:0,21,233	0/0:32,0:36:57.17:0,57,1814	0/0:18,0:19:39.13:0,39,1614	0/0:38,0:39:60.08:0,60,1878	1/1:33,0:32:18.42:154,18,0	1/1:9,5:16:20.62:314,21,0	1/1:21,5:26:5.91:882,6,0	1/1:9,6:17:24.39:355,24,0	0/0:24,0:28:33.11:0,33,1545	0/0:26,0:27:51.16:0,51,2012	0/0:24,0:26:26.85:0,27,1256	1/1:25,12:40:29.04:588,29,0	0/0:24,0:34:72.20:0,72,1464	1/1:21,2:23:15:348,15,0	0/1:5,0:9:4.49:159,0,4	1/1:11,0:10:3.01:33,3,0	1/1:11,8:20:41.46:531,41,0	1/1:39,0:39:16.36:159,16,0	0/0:29,0:31:42.13:0,42,1485	0/0:24,0:27:38.47:0,38,1526	0/0:54,0:60:99:0,132,5945	1/1:12,5:18:9.18:342,9,0	1/1:19,4:23:32.77:745,33,0	1/1:11,5:16:20.12:640,20,0	0/1:5,5:10:80.31:180,0,80
chr10	57863190	.	TAGACAGACAGACAGAC	T	14670.13	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=13.515;DP=801;FS=8.124;HRun=0;HaplotypeScore=313.8243;InbreedingCoeff=0.9061;MQ=49.99;MQ0=11;MQRankSum=-9.938;QD=33.49;ReadPosRankSum=-2.190;VQSLOD=2.3436;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,28:41:9.53:247,10,0	1/1:3,10:13:11.93:513,12,0	0/0:46,0:18:12.51:0,13,251	0/0:38,0:15:3.45:0,3,22	1/1:8,17:25:14.98:418,15,0	0/0:23,0:23:45.15:0,45,2930	0/0:34,0:33:78.23:0,78,3483	1/1:23,18:41:51.11:720,51,0	1/1:8,5:14:35.97:888,36,0	1/1:22,2:24:35.82:1097,36,0	1/1:7,2:9:12.03:312,12,0	0/0:44,0:44:90.31:0,90,4973	0/0:37,0:37:96.33:0,96,5364	0/0:35,0:35:81.26:0,81,4946	1/1:29,16:45:71.95:2398,72,0	1/1:6,37:43:47.76:2019,48,0	1/1:8,11:18:12.04:486,12,0	1/1:7,15:22:2.94:18,3,0	1/1:10,4:14:21.07:727,21,0	1/1:20,3:23:23.95:605,24,0	1/1:22,4:26:33.04:800,33,0	0/0:22,0:22:51.63:0,52,2925	0/0:24,0:24:51.17:0,51,2863	0/0:60,0:60:99:0,123,6992	1/1:14,8:22:35.94:1159,36,0	1/1:17,2:19:30.09:716,30,0	1/1:7,28:35:29.91:1293,30,0	1/1:1,2:3:6.02:253,6,0
chr10	57863283	.	CGTTTTCCTGGTACTAGT	C	22109.66	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=17.594;DP=736;FS=30.651;HRun=0;HaplotypeScore=333.8414;InbreedingCoeff=0.9815;MQ=85.62;MQ0=0;MQRankSum=-16.673;QD=86.70;ReadPosRankSum=1.977;VQSLOD=3.3803;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:78.27:0,78,6192	1/1:3,5:8:15.05:738,15,0	0/0:34,0:35:99:0,99,5441	0/0:25,0:25:37.05:0,37,4765	0/0:28,0:28:78.23:0,78,5872	0/0:28,0:28:78.22:0,78,5574	0/0:35,0:35:99:0,99,7431	1/1:15,11:26:33.09:1415,33,0	1/1:4,14:18:27.09:1330,27,0	1/1:3,16:20:51.07:2276,51,0	1/1:1,11:12:29.84:1368,30,0	0/0:36,0:36:99:0,105,7943	0/0:49,0:49:99:0,135,9974	0/0:33,0:33:93.32:0,93,7034	1/1:11,26:37:66.23:3237,66,0	0/0:57,0:57:99:0,132,10957	1/1:7,8:15:21.07:1034,21,0	0/0:23,0:23:42.14:0,42,3491	1/1:6,7:13:18.06:887,18,0	1/1:5,18:23:48.16:2305,48,0	1/1:6,12:18:33.11:1605,33,0	0/0:24,0:24:66.22:0,66,5018	0/0:25,0:25:75.26:0,75,5588	0/0:46,0:46:99:0,132,9240	1/1:4,14:18:36.12:1756,36,0	1/1:7,17:24:51.15:2387,51,0	1/1:11,9:20:30.10:1475,30,0	1/1:1,2:3:6.02:296,6,0
chr10	57864089	.	CATAT	C	303.30	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=2.864;DP=412;FS=2.117;HRun=0;HaplotypeScore=88.0694;InbreedingCoeff=0.7475;MQ=70.64;MQ0=4;MQRankSum=1.231;QD=8.43;ReadPosRankSum=1.269;VQSLOD=2.5149;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,13:18:5.98:103,6,0	0/0:8,0:8:11.88:0,12,302	0/0:22,0:12:11.20:0,11,95	0/0:19,0:9:11.74:0,12,117	1/1:1,17:18:17.93:309,18,0	0/0:11,0:13:35.91:0,36,797	0/0:12,0:12:21.07:0,21,512	0/0:20,0:20:42.13:0,42,993	0/0:12,0:12:15.05:0,15,346	0/0:9,0:9:21.07:0,21,524	0/0:15,0:15:21.07:0,21,499	0/0:13,0:13:33.11:0,33,823	0/0:15,0:15:30.10:0,30,718	0/0:13,0:13:33.11:0,33,792	0/0:13,0:13:8.93:0,9,176	0/0:1,0:8:16.73:0,17,75	0/0:20,0:22:50.72:0,51,1055	0/0:27,0:27:75.21:0,75,1823	0/0:11,0:11:22.58:0,23,598	0/0:14,0:16:35.91:0,36,843	0/0:5,0:5:9.03:0,9,219	0/0:3,0:3:3:0,3,25	0/0:17,0:18:50.96:0,51,1183	0/0:10,0:10:21.05:0,21,436	0/0:14,0:14:21.07:0,21,499	0/0:20,0:21:38.92:0,39,852	0/0:13,0:13:21.07:0,21,528	0/0:21,0:21:45.15:0,45,1073
chr10	57864137	.	TACA	T	128.76	PASS	AB=0.950;AC=10;AF=0.185;AN=54;BaseQRankSum=7.203;DP=283;FS=0.787;HRun=0;HaplotypeScore=81.5150;InbreedingCoeff=-0.0768;MQ=60.05;MQ0=6;MQRankSum=-0.748;QD=1.43;ReadPosRankSum=3.466;VQSLOD=1.3357;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:0:0,0,0	0/1:3,0:3:2.61:3,0,20	0/0:16,0:8:18.01:0,18,227	0/0:15,0:5:4.31:0,4,21	./.	0/0:14,0:14:42.14:0,42,918	0/0:8,0:8:24.07:0,24,507	0/1:28,0:27:57.77:58,0,246	0/0:8,0:8:0.77:0,1,70	0/1:5,0:5:13.50:13,0,30	0/0:12,0:12:5.93:0,6,64	0/0:11,0:11:33.11:0,33,742	0/0:9,0:9:27.09:0,27,619	0/0:6,0:6:18.06:0,18,408	1/1:11,0:11:2.14:8,2,0	0/0:7,0:7:15.05:0,15,244	0/1:11,1:12:49.35:49,0,119	0/0:18,0:18:46.69:0,47,742	0/1:5,0:4:4.57:5,0,42	0/0:7,1:8:3.83:0,4,165	0/1:3,1:4:2.59:3,0,34	0/0:2,0:2:3.01:0,3,74	0/0:15,0:15:45.14:0,45,999	0/0:10,0:9:21.06:0,21,383	0/0:11,0:11:0.88:0,1,72	0/1:12,2:13:98.24:98,0,185	0/1:8,0:8:11.42:11,0,55	0/0:11,1:12:6.89:0,7,155
chr10	57864163	.	TAC	T	411.46	PASS	AB=0.972;AC=19;AF=0.396;AN=48;BaseQRankSum=7.570;DP=199;FS=19.244;HRun=0;HaplotypeScore=79.6161;InbreedingCoeff=0.4522;MQ=47.99;MQ0=7;MQRankSum=-6.761;QD=4.33;ReadPosRankSum=-0.452;VQSLOD=0.5433;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	1/1:5,0:5:1.15:15,1,0	./.	./.	./.	0/0:14,0:14:39.06:0,39,665	0/0:5,0:5:15.05:0,15,258	0/1:21,4:23:99:161,0,113	0/0:5,0:5:1.25:0,1,3	1/1:3,0:3:8.14:41,8,0	0/1:12,0:12:0:0,0,0	0/0:12,0:12:33.01:0,33,484	0/0:9,0:9:27.09:0,27,488	0/0:5,0:4:12.04:0,12,200	0/0:7,0:7:0.62:0,1,2	0/1:4,0:4:5.61:6,0,24	1/1:10,0:9:3.05:21,3,0	0/0:11,0:10:14.72:0,15,184	1/1:1,0:1:1.55:4,2,0	0/0:3,0:3:1.16:0,1,3	0/1:2,0:2:0:0,0,0	0/0:2,0:2:3.01:0,3,58	0/0:11,0:11:30.09:0,30,514	0/0:7,0:6:15.05:0,15,274	1/1:10,0:10:8.89:59,9,0	0/1:8,0:8:7.92:76,0,8	1/1:4,0:4:5.65:28,6,0	1/1:11,0:11:25.63:144,26,0
chr10	57864167	.	TAC	T	718.11	PASS	AB=1.000;AC=22;AF=0.500;AN=44;BaseQRankSum=7.924;DP=181;FS=8.319;HRun=0;HaplotypeScore=77.5892;InbreedingCoeff=0.6327;MQ=42.87;MQ0=7;MQRankSum=-7.541;QD=8.07;ReadPosRankSum=-0.202;VQSLOD=2.3502;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	1/1:4,0:4:2.94:18,3,0	./.	./.	./.	0/0:13,0:13:39.05:0,39,647	0/0:5,0:5:12.04:0,12,216	1/1:20,4:21:18.77:372,19,0	0/1:4,0:4:0:0,0,0	1/1:3,0:3:8.98:86,9,0	./.	0/0:9,0:9:20.99:0,21,332	0/0:9,0:9:27.08:0,27,470	0/0:5,0:4:12.04:0,12,199	0/1:6,0:6:0:0,0,0	0/1:4,0:4:5.65:6,0,18	1/1:8,0:7:0.22:0,0,0	0/0:7,3:9:4.58:0,5,95	1/1:1,0:1:1.55:4,2,0	0/1:4,0:4:0:0,0,0	./.	0/0:2,0:2:3.01:0,3,58	0/0:11,0:11:27.09:0,27,489	0/0:7,0:6:15.05:0,15,274	1/1:8,0:8:8.90:62,9,0	1/1:8,0:8:17.72:128,18,0	1/1:4,0:4:5.62:27,6,0	1/1:11,0:11:26.27:163,26,0
chr10	57864169	.	C	CAT	852.60	PASS	AB=1.000;AC=20;AF=0.455;AN=44;BaseQRankSum=6.944;DP=172;FS=8.842;HRun=0;HaplotypeScore=74.6413;InbreedingCoeff=0.5883;MQ=41.90;MQ0=7;MQRankSum=-7.186;QD=10.03;ReadPosRankSum=-0.699;VQSLOD=2.3831;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	1/1:4,0:4:2.92:18,3,0	./.	./.	./.	0/0:12,0:12:36.10:0,36,491	0/0:4,0:4:12.04:0,12,172	1/1:16,7:20:31.43:553,31,0	0/1:3,0:3:0:0,0,0	1/1:2,1:3:7.79:78,8,0	./.	0/0:7,0:7:18.05:0,18,236	0/0:9,0:9:24.08:0,24,343	0/0:5,0:4:9.03:0,9,129	0/1:6,0:6:0:0,0,0	1/1:4,0:4:2.87:30,3,0	0/0:6,2:7:1.36:0,1,3	0/1:9,0:8:16.15:16,0,48	0/0:1,0:1:0:0,0,0	0/1:4,0:4:0:0,0,0	./.	0/0:2,0:2:3.01:0,3,43	0/0:13,0:13:27.09:0,27,385	0/0:7,0:6:15.05:0,15,215	1/1:7,0:7:5.16:24,5,0	1/1:7,0:7:13.64:66,14,0	1/1:4,0:4:5.80:32,6,0	1/1:11,0:11:19.49:181,19,0
chr10	57864172	.	AC	A	241.79	PASS	AB=0.839;AC=9;AF=0.214;AN=42;BaseQRankSum=4.296;DP=158;FS=1.094;HRun=1;HaplotypeScore=75.5554;InbreedingCoeff=0.1315;MQ=41.04;MQ0=7;MQRankSum=-4.132;QD=4.40;ReadPosRankSum=0.991;VQSLOD=0.4329;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/0:3,1:4:2.97:0,3,20	./.	./.	./.	0/0:12,0:12:36.09:0,36,525	0/0:4,0:4:12.04:0,12,190	0/1:21,1:20:22.34:22,0,178	./.	0/1:2,1:3:13.45:29,0,13	./.	0/0:6,0:6:18.04:0,18,260	0/0:9,0:9:27.09:0,27,423	0/0:4,0:3:9.03:0,9,142	0/1:1,1:3:0.02:0,0,0	0/0:4,0:4:2.98:0,3,21	0/0:8,0:7:5.84:0,6,57	0/0:9,0:8:11.48:0,11,101	0/1:1,0:1:0:0,0,0	0/1:3,0:3:0:0,0,0	./.	0/0:2,0:2:3.01:0,3,48	0/0:13,0:13:33.11:0,33,515	0/0:7,0:6:15.05:0,15,236	0/0:2,1:5:2.95:0,3,19	1/1:3,3:7:1.83:128,2,0	0/1:1,3:4:5.27:32,0,5	0/1:9,2:11:58.98:134,0,59
chr10	57864174	.	A	ATG	290.11	PASS	AB=0.842;AC=16;AF=0.381;AN=42;BaseQRankSum=3.873;DP=168;FS=40.607;HRun=0;HaplotypeScore=80.9625;InbreedingCoeff=0.2216;MQ=40.32;MQ0=6;MQRankSum=-5.234;QD=3.30;ReadPosRankSum=-1.750;VQSLOD=-0.2049;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	1/1:3,1:4:3:36,3,0	./.	./.	./.	0/0:12,0:12:33.11:0,33,502	0/0:4,0:4:12.04:0,12,182	0/1:29,0:26:57.74:58,0,224	./.	0/1:3,1:4:8.30:41,0,8	./.	0/0:5,0:5:15.05:0,15,225	0/0:9,0:9:27.09:0,27,408	0/0:4,0:3:9.03:0,9,135	0/1:4,0:4:0:0,0,0	1/1:4,0:4:2.61:12,3,0	0/1:9,1:9:1.82:12,0,2	0/0:9,0:8:8.67:0,9,67	1/1:2,0:2:2.34:19,2,0	0/1:1,2:3:0:0,0,0	./.	0/0:2,0:2:3.01:0,3,46	0/0:13,0:13:30.10:0,30,457	0/0:7,0:6:15.05:0,15,228	1/1:5,1:6:3.01:37,3,0	0/1:5,2:7:33.29:72,0,33	0/1:3,1:4:1.73:41,0,2	0/1:9,2:11:13.43:91,0,13
chr10	57867542	.	G	GT	3498.70	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-6.869;DP=753;FS=2.007;HRun=1;HaplotypeScore=76.1013;InbreedingCoeff=0.9970;MQ=85.79;MQ0=0;MQRankSum=-5.356;QD=41.65;ReadPosRankSum=2.252;VQSLOD=4.2470;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,43:43:99:1798,120,0	0/0:6,0:6:18.06:0,18,234	0/0:26,0:26:62.18:0,62,807	0/0:24,0:23:60.09:0,60,724	1/1:1,28:29:81.27:1206,81,0	0/0:20,0:20:60.19:0,60,778	0/0:40,0:40:99:0,114,1435	0/0:34,0:34:93.22:0,93,1096	0/0:32,0:32:84.26:0,84,1075	0/0:29,0:29:80.85:0,81,1040	0/0:19,0:19:57.18:0,57,737	0/0:26,0:26:78.24:0,78,993	0/0:29,0:29:84.26:0,84,1073	0/0:26,0:26:75.24:0,75,974	0/0:34,0:34:99:0,99,1285	0/0:34,0:34:99:0,102,1310	0/0:27,0:27:81.26:0,81,1051	1/1:0,12:12:33.11:494,33,0	0/0:17,0:17:51.16:0,51,649	0/0:28,0:28:81.24:0,81,1023	0/0:47,0:47:99:0,141,1801	0/0:17,0:17:51.17:0,51,662	0/0:21,0:21:63.20:0,63,815	0/0:37,0:37:99:0,111,1440	0/0:21,0:21:63.20:0,63,816	0/0:23,0:23:69.21:0,69,881	0/0:32,0:31:93.29:0,93,1192	0/0:20,0:20:54.17:0,54,696
chr10	57869228	.	C	CAGATGTGTGAGGC	24339.31	PASS	AB=0.696;AC=35;AF=0.625;AN=56;BaseQRankSum=15.820;DP=590;FS=8.409;HRun=0;HaplotypeScore=337.8444;InbreedingCoeff=0.9167;MQ=60.56;MQ0=1;MQRankSum=-16.484;QD=74.43;ReadPosRankSum=0.297;VQSLOD=3.4914;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:9,2:16:2.17:703,0,2	1/1:5,0:5:12.04:451,12,0	0/0:19,0:16:44.33:0,44,1188	0/0:19,0:17:45:0,45,1281	1/1:31,0:31:56.86:1549,57,0	0/0:32,0:32:93.32:0,93,3544	0/0:19,0:18:51.12:0,51,1591	1/1:25,0:25:55.67:1484,56,0	1/1:25,0:25:66.23:2717,66,0	1/1:20,0:20:47.78:1259,48,0	1/1:21,0:21:42.14:1479,42,0	0/0:38,0:38:99:0,108,3843	0/0:32,0:32:90.29:0,90,3346	0/0:26,0:26:69.24:0,69,2654	1/1:22,0:22:63.22:2487,63,0	1/1:21,0:21:54.19:2271,54,0	1/1:14,0:14:30.02:928,30,0	1/1:5,0:5:10.46:431,10,0	1/1:13,0:12:25.41:852,25,0	1/1:20,0:20:27.53:877,28,0	1/1:10,0:10:3.78:231,4,0	0/0:28,0:28:78.25:0,78,2673	0/0:26,0:26:69.21:0,69,2202	0/0:24,0:24:69.22:0,69,2466	1/1:23,0:23:48.16:1383,48,0	1/1:27,0:27:75.22:2145,75,0	1/1:24,0:24:63.22:2474,63,0	1/1:5,0:5:15.05:617,15,0
chr10	57869229	.	A	AGATGTGTGAGGCAGGAAGGCAGAGGCAGGTG	101737.71	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=8.919;DP=761;FS=15.330;HRun=0;HaplotypeScore=537.8503;InbreedingCoeff=0.9957;MQ=57.03;MQ0=1;MQRankSum=-19.767;QD=203.88;ReadPosRankSum=0.240;VQSLOD=4.1833;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:16,1:17:48.16:3675,48,0	1/1:7,1:9:21.07:1977,21,0	0/0:20,0:17:47.35:0,47,1660	0/0:21,0:19:44.96:0,45,1678	1/1:39,0:39:75.10:3697,75,0	0/0:33,0:33:96.32:0,96,7132	0/0:17,0:17:51.14:0,51,3077	1/1:38,0:38:99:5023,99,0	1/1:23,4:32:87.23:9269,87,0	1/1:33,0:33:87.30:7718,87,0	1/1:23,0:23:48.16:3060,48,0	0/0:38,0:38:99:0,111,7396	0/0:31,0:31:93.31:0,93,6425	0/0:25,0:25:69.24:0,69,5043	1/1:40,4:45:99:12409,126,0	1/1:33,2:41:99:11328,105,0	1/1:15,1:19:36.04:2882,36,0	1/1:9,0:9:14.98:2146,15,0	1/1:17,0:16:45.11:3369,45,0	1/1:27,1:33:64.57:5484,65,0	1/1:15,0:15:18:1613,18,0	0/0:28,0:28:84.29:0,84,5054	0/0:26,0:26:75.23:0,75,4080	0/0:23,0:23:69.24:0,69,4714	1/1:23,1:29:63.22:5329,63,0	1/1:26,1:34:46.68:6299,47,0	1/1:40,5:50:99:13206,126,0	1/1:9,2:16:33.11:3254,33,0
chr10	57869231	.	ATC	A	62.50	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=4.278;DP=735;FS=13.380;HRun=0;HaplotypeScore=147.3223;InbreedingCoeff=0.5139;MQ=57.52;MQ0=1;MQRankSum=0.345;QD=0.63;ReadPosRankSum=-3.759;VQSLOD=0.8585;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:6.01:0,6,69	0/0:9,0:9:8.98:0,9,100	0/0:19,0:17:43.63:0,44,711	0/0:21,0:19:54.11:0,54,839	1/1:36,1:37:9.09:90,9,0	0/0:33,0:33:99:0,99,1815	0/0:17,0:17:45.15:0,45,818	0/1:40,0:40:19.16:19,0,856	0/0:28,0:28:27.06:0,27,326	0/0:29,0:29:0.15:0,0,606	1/1:22,0:22:5.94:66,6,0	0/0:39,0:39:99:0,111,2010	0/0:32,0:32:96.33:0,96,1721	0/0:24,0:24:69.24:0,69,1265	0/0:44,0:44:33.09:0,33,472	0/0:39,0:39:33.10:0,33,525	0/0:17,0:17:15.05:0,15,227	0/0:9,0:9:12.03:0,12,184	0/0:16,0:15:18.01:0,18,318	0/0:30,0:30:11.98:0,12,133	0/0:14,3:17:9.02:0,9,128	0/0:29,0:29:87.28:0,87,1556	0/0:25,0:25:72.23:0,72,1290	0/0:23,0:23:69.21:0,69,1204	0/0:25,0:25:6.01:0,6,80	0/0:27,0:27:24.07:0,24,361	0/0:50,0:50:63.14:0,63,866	0/0:16,0:16:24.07:0,24,364
chr10	57870923	.	GCACACACA	G	2749.01	PASS	AB=0.695;AC=22;AF=0.423;AN=52;BaseQRankSum=7.968;DP=571;FS=6.058;HRun=0;HaplotypeScore=177.4308;InbreedingCoeff=0.7214;MQ=52.55;MQ0=19;MQRankSum=-5.794;QD=12.33;ReadPosRankSum=0.893;VQSLOD=2.1241;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:35:21.89:0,22,567	0/1:5,0:9:14.31:14,0,62	./.	./.	0/0:13,0:22:10.67:0,11,61	0/0:19,0:18:36.12:0,36,1102	0/0:22,0:22:36.12:0,36,1255	0/0:21,0:20:20.86:0,21,216	1/1:8,9:18:11.62:299,12,0	1/1:9,16:27:50.67:972,51,0	1/1:14,7:22:3.01:76,3,0	0/0:32,0:32:54.18:0,54,1835	0/0:15,0:15:36.12:0,36,1322	0/0:18,0:21:48.16:0,48,1634	1/1:8,8:16:15.05:382,15,0	0/0:7,0:17:17.57:0,18,532	0/1:17,0:30:0.76:1,0,191	0/0:14,0:20:21.92:0,22,495	1/1:14,2:13:7.95:211,8,0	1/1:8,16:25:3.01:76,3,0	0/0:21,11:28:2.20:0,2,7	0/0:24,0:24:45.14:0,45,1598	0/0:14,0:16:30.10:0,30,1058	0/0:28,0:29:54.19:0,54,2074	1/1:14,5:22:12.04:293,12,0	1/1:8,6:14:11.90:236,12,0	1/1:6,10:15:7.36:298,7,0	1/1:3,2:5:3.01:76,3,0
chr10	57872668	.	GT	G	8023.77	PASS	AB=0.926;AC=35;AF=0.625;AN=56;BaseQRankSum=6.857;DP=628;FS=4.250;HRun=10;HaplotypeScore=91.7699;InbreedingCoeff=0.9015;MQ=73.80;MQ0=1;MQRankSum=-3.511;QD=18.66;ReadPosRankSum=2.577;VQSLOD=5.5338;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,26:31:77.97:671,78,0	1/1:2,6:8:14.99:130,15,0	0/0:29,1:19:20.67:0,21,233	0/0:26,0:16:21.49:0,21,211	1/1:5,14:19:44.94:384,45,0	0/0:31,0:31:37.67:0,38,651	0/0:12,1:13:13.04:0,13,362	1/1:2,35:37:99:868,102,0	1/1:2,23:25:62.97:547,63,0	1/1:4,23:27:65.96:572,66,0	1/1:2,11:13:20.97:182,21,0	0/0:25,0:25:54.61:0,55,690	0/1:23,2:25:6.28:6,0,533	0/0:14,0:14:33.07:0,33,356	1/1:1,32:33:65.46:572,65,0	1/1:4,22:26:71.98:623,72,0	1/1:6,17:23:29.76:480,30,0	1/1:3,6:9:17.98:155,18,0	1/1:6,18:24:53.94:461,54,0	1/1:4,23:28:65.96:570,66,0	1/1:3,9:12:20.98:182,21,0	0/0:19,0:19:47.12:0,47,529	0/0:18,1:19:31.09:0,31,552	0/0:15,0:15:39.08:0,39,415	1/1:4,19:23:47.98:416,48,0	1/1:8,26:35:52.07:643,52,0	1/1:6,26:32:65.84:561,66,0	0/0:5,0:5:0:0,0,0
chr10	57872705	.	CCCT	C	2244.54	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=8.329;DP=635;FS=3.408;HRun=0;HaplotypeScore=132.5297;InbreedingCoeff=0.9900;MQ=76.41;MQ0=4;MQRankSum=-5.623;QD=25.51;ReadPosRankSum=-1.245;VQSLOD=3.6829;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:28,8:36:74.58:1026,75,0	0/0:9,0:9:24.08:0,24,566	0/0:51,0:32:58.46:0,58,980	0/0:37,0:20:38.41:0,38,587	1/1:15,4:19:43.03:491,43,0	0/0:31,0:31:87.30:0,87,1940	0/0:12,0:12:27.56:0,28,611	0/0:40,0:40:99:0,111,2098	0/0:21,0:21:54.06:0,54,1044	0/0:23,0:23:69.24:0,69,1568	0/0:13,0:13:33.07:0,33,725	0/0:20,0:20:60.18:0,60,1261	0/0:20,0:20:47.90:0,48,1065	0/0:17,0:17:48.15:0,48,1023	0/0:38,0:38:81.25:0,81,1719	1/1:23,3:26:57.78:713,58,0	0/0:21,0:21:51.17:0,51,1130	1/1:6,1:7:17.98:175,18,0	0/0:14,0:14:39.11:0,39,669	0/0:26,0:26:69.15:0,69,1465	0/0:10,0:10:18.06:0,18,366	0/0:20,0:20:57.18:0,57,1214	0/0:17,0:17:45.13:0,45,959	0/0:15,0:15:42.14:0,42,975	0/0:15,0:15:30.10:0,30,652	0/0:33,0:33:99:0,99,2124	0/0:39,0:39:78.73:0,79,1660	0/0:5,0:5:15.05:0,15,350
chr10	57872706	.	CCT	C	2081.91	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=10.076;DP=634;FS=5.796;HRun=0;HaplotypeScore=122.1922;InbreedingCoeff=0.9653;MQ=77.15;MQ0=4;MQRankSum=-6.568;QD=24.49;ReadPosRankSum=-2.774;VQSLOD=3.5925;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,14:33:86.72:902,87,0	0/0:9,0:9:24.08:0,24,416	0/0:51,0:32:52.39:0,52,672	0/0:38,0:21:6.81:0,7,315	1/1:14,5:19:47.69:452,48,0	0/0:30,0:30:81.28:0,81,1384	0/0:12,0:12:30.08:0,30,466	0/0:42,0:42:90.17:0,90,1298	0/0:21,0:21:45.08:0,45,714	0/0:23,0:23:66.20:0,66,1043	0/0:13,0:13:30.10:0,30,519	0/0:20,0:20:57.13:0,57,884	0/0:20,0:20:45.15:0,45,777	0/0:17,0:17:45.15:0,45,744	0/0:38,0:38:75.20:0,75,1170	1/1:14,12:26:68.85:706,69,0	0/0:21,0:21:48.13:0,48,783	1/1:4,3:7:17.95:182,18,0	0/0:14,0:14:27.07:0,27,389	0/0:26,0:26:63.18:0,63,1031	0/0:10,0:10:18.06:0,18,289	0/0:20,0:20:51.16:0,51,850	0/0:16,0:16:39.12:0,39,642	0/0:15,0:15:42.13:0,42,678	0/0:15,0:15:30.10:0,30,476	0/0:33,0:33:99:0,99,1531	0/0:40,0:40:75.19:0,75,1171	0/0:5,0:5:15.05:0,15,259
chr10	57872707	.	CT	C	465.55	PASS	AB=0.956;AC=6;AF=0.107;AN=56;BaseQRankSum=9.838;DP=604;FS=5.445;HRun=1;HaplotypeScore=112.4518;InbreedingCoeff=0.5937;MQ=77.43;MQ0=3;MQRankSum=-5.419;QD=5.61;ReadPosRankSum=-1.156;VQSLOD=0.0323;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:30,2:32:11.04:279,11,0	0/0:9,0:9:24.08:0,24,366	0/0:48,0:32:57.02:0,57,654	0/0:36,0:20:30.25:0,30,333	0/1:18,1:19:30.64:89,0,31	0/0:29,0:29:87.28:0,87,1257	0/0:12,0:12:28.84:0,29,411	0/0:39,0:39:99:0,105,1400	0/0:22,0:22:50.69:0,51,691	0/0:23,0:23:69.23:0,69,1034	0/0:13,0:13:30.09:0,30,454	0/0:19,0:19:54.63:0,55,761	0/0:16,0:16:45.15:0,45,674	0/0:16,0:16:44.98:0,45,600	0/0:35,0:35:78.17:0,78,1089	0/1:25,1:26:54.80:158,0,55	0/0:19,0:19:50.98:0,51,719	1/1:6,0:6:14.62:71,15,0	0/0:13,0:13:38.75:0,39,453	0/0:25,0:25:60.78:0,61,889	0/0:9,0:9:17.78:0,18,219	0/0:18,0:18:54.16:0,54,752	0/0:16,0:16:39.13:0,39,589	0/0:14,0:14:42.14:0,42,633	0/0:14,0:14:30.06:0,30,386	0/0:33,0:33:99:0,99,1381	0/0:37,0:37:81.10:0,81,1101	0/0:5,0:5:15.05:0,15,214
chr10	57872798	.	C	CGG	21095.26	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-16.235;DP=662;FS=2.100;HRun=1;HaplotypeScore=79.3974;InbreedingCoeff=0.9997;MQ=69.43;MQ0=0;MQRankSum=-3.113;QD=50.23;ReadPosRankSum=0.694;VQSLOD=4.8143;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,40:43:99:2027,105,0	1/1:0,9:9:27.09:521,27,0	0/0:24,0:24:69.22:0,69,1031	0/0:20,0:20:53.64:0,54,710	1/1:1,28:31:72.20:1351,72,0	0/0:24,0:24:72.20:0,72,1072	0/0:26,0:26:78.26:0,78,1194	1/1:5,18:24:66.21:1221,66,0	1/1:1,24:25:66.23:1275,66,0	1/1:3,20:24:69.14:1193,69,0	1/1:0,14:14:36.08:656,36,0	0/0:20,0:20:60.19:0,60,895	0/0:25,0:25:72.24:0,72,1100	0/0:23,0:23:66.17:0,66,964	1/1:1,34:35:99:1987,105,0	1/1:3,33:36:99:2024,108,0	1/1:2,16:18:42.14:807,42,0	1/1:1,21:22:60.99:1213,61,0	1/1:2,14:16:41.76:778,42,0	1/1:2,12:14:30.10:577,30,0	1/1:2,22:24:63.22:1217,63,0	0/0:28,0:28:78.23:0,78,1167	0/0:27,0:27:78.25:0,78,1164	0/0:25,0:24:69.23:0,69,1054	1/1:2,18:20:51.13:946,51,0	1/1:0,21:21:63.22:1216,63,0	1/1:0,30:29:75.26:1448,75,0	1/1:2,12:14:33.11:637,33,0
chr10	57873058	.	T	TGC	1354.36	PASS	AB=0.967;AC=21;AF=0.375;AN=56;BaseQRankSum=7.642;DP=615;FS=2.030;HRun=0;HaplotypeScore=123.2610;InbreedingCoeff=0.0433;MQ=55.94;MQ0=7;MQRankSum=-1.021;QD=4.53;ReadPosRankSum=-2.547;VQSLOD=2.4008;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:29:2.43:46,2,0	1/1:8,0:8:0.55:37,1,0	0/0:34,0:20:51.53:0,52,561	0/0:23,0:18:33.03:0,33,449	0/1:15,0:15:5.54:6,0,7	0/0:11,0:11:30.07:0,30,403	0/0:24,0:24:59.99:0,60,753	0/1:11,14:25:99:281,0,100	0/1:18,0:18:9.57:81,0,10	0/1:25,0:25:15.75:237,0,16	1/1:11,0:10:5.99:50,6,0	0/0:33,0:32:80.81:0,81,1001	0/0:33,0:33:71.74:0,72,1070	0/0:34,0:34:59.62:0,60,958	1/1:26,0:26:4.29:215,4,0	0/1:13,0:13:9.16:37,0,9	0/1:27,0:27:35.57:36,0,106	0/1:18,0:18:59.12:59,0,67	0/1:9,0:7:39.70:42,0,40	1/1:17,0:16:6.90:60,7,0	0/0:23,0:22:0.94:0,1,2	0/0:22,0:22:44.95:0,45,475	0/0:21,0:21:47.98:0,48,533	0/0:41,0:40:99:0,105,1283	0/0:17,0:16:2.97:0,3,20	0/1:18,0:18:72.28:116,0,72	0/1:28,0:26:99:132,0,121	0/1:10,0:10:15.06:84,0,15
chr10	57873060	.	T	TGCGC	4068.93	PASS	AB=0.807;AC=23;AF=0.411;AN=56;BaseQRankSum=0.625;DP=623;FS=4.607;HRun=0;HaplotypeScore=144.5943;InbreedingCoeff=0.2221;MQ=59.35;MQ0=6;MQRankSum=-2.366;QD=13.13;ReadPosRankSum=-4.353;VQSLOD=2.4434;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:36:15.25:131,15,0	1/1:8,0:8:6.02:90,6,0	0/0:34,0:20:46.99:0,47,777	0/0:24,0:20:48.13:0,48,774	0/1:11,0:19:29.10:29,0,32	0/0:11,0:11:30.06:0,30,502	0/0:24,0:24:57.19:0,57,990	0/1:28,0:27:74.71:659,0,75	0/1:7,9:18:9.30:204,0,9	1/1:24,0:24:3.78:575,4,0	1/1:10,0:9:6.02:99,6,0	0/0:31,0:30:78.27:0,78,1346	0/0:33,0:33:81.22:0,81,1346	0/0:32,0:32:78.20:0,78,1271	1/1:25,0:25:7.07:442,7,0	1/1:13,0:14:14.97:161,15,0	0/1:12,13:27:99:131,0,133	0/1:10,0:20:97.94:421,0,98	0/1:10,0:8:73.05:146,0,73	1/1:15,0:14:9.03:123,9,0	0/0:9,14:24:0:0,0,0	0/0:19,0:19:42.14:0,42,692	0/0:19,0:19:48.15:0,48,787	0/0:41,0:40:99:0,105,1830	0/0:5,13:19:2.99:0,3,24	0/1:7,8:17:77.49:343,0,77	0/1:28,0:26:99:327,0,130	0/1:10,0:10:51.32:189,0,51
chr10	57874090	.	CG	C	202.46	PASS	AB=0.982;AC=6;AF=0.107;AN=56;BaseQRankSum=-4.508;DP=449;FS=2.568;HRun=10;HaplotypeScore=99.8054;InbreedingCoeff=0.2863;MQ=86.23;MQ0=0;MQRankSum=-1.175;QD=5.33;ReadPosRankSum=-1.532;VQSLOD=1.5136;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:13.26:0,13,137	0/0:5,0:5:13.82:0,14,63	0/0:16,0:15:2.44:0,2,91	0/0:20,0:19:2.50:0,2,65	0/1:4,0:4:13.45:13,0,42	0/0:7,0:7:11.03:0,11,87	0/0:17,0:24:41.89:0,42,291	0/0:12,0:12:21.13:0,21,89	0/0:13,0:13:12.04:0,12,126	0/0:17,0:17:31.32:0,31,130	0/0:8,0:8:17.60:0,18,88	0/0:18,0:18:17.38:0,17,157	0/0:12,0:12:16.57:0,17,189	0/1:12,1:13:10.56:11,0,105	0/0:16,0:16:14.07:0,14,136	1/1:1,11:12:32.99:286,33,0	0/0:30,0:30:76.58:0,77,399	0/0:27,0:27:4.90:0,5,242	0/0:11,0:11:28.37:0,28,170	0/1:6,0:6:6.20:6,0,70	0/0:47,0:46:85.65:0,86,507	0/1:3,0:3:0:0,0,0	0/0:5,0:5:8.96:0,9,78	0/0:32,0:32:51.08:0,51,616	0/0:18,0:18:47.51:0,48,234	0/0:21,0:21:30.17:0,30,238	0/0:20,0:20:50.93:0,51,257	0/0:11,0:11:28.49:0,28,145
chr10	57876172	.	A	ATTT	5770.57	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=7.173;DP=518;FS=3.625;HRun=12;HaplotypeScore=112.1790;InbreedingCoeff=0.9429;MQ=76.47;MQ0=2;MQRankSum=-5.259;QD=18.20;ReadPosRankSum=-0.488;VQSLOD=3.5600;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:28:44.34:254,44,0	1/1:7,0:7:17.91:144,18,0	0/0:47,0:25:35.15:0,35,320	0/0:24,0:14:0.31:0,0,68	1/1:21,0:21:27.41:288,27,0	0/0:16,0:16:39.04:0,39,437	0/0:9,0:9:20.96:0,21,224	1/1:25,0:24:57.82:492,58,0	1/1:12,0:12:20.97:206,21,0	1/1:20,0:20:47.60:433,48,0	1/1:14,2:16:35.92:362,36,0	0/0:19,0:19:45.04:0,45,505	0/0:13,0:13:36.01:0,36,387	0/0:14,0:14:36.02:0,36,403	1/1:19,0:19:35.75:279,36,0	0/0:16,0:16:34.86:0,35,218	1/1:20,0:21:47.92:391,48,0	0/0:9,0:9:14.89:0,15,74	1/1:21,0:20:53.81:546,54,0	1/1:32,0:32:25.64:588,26,0	1/1:7,0:7:5.96:44,6,0	0/0:11,0:11:20.94:0,21,228	0/0:14,0:14:42.12:0,42,471	0/0:8,0:8:18:0,18,202	1/1:20,1:20:44.64:372,45,0	1/1:30,2:33:63.54:730,64,0	1/1:17,1:19:44.52:379,45,0	1/1:14,0:15:26.98:262,27,0
chr10	57876184	.	T	TTTAA	17149.69	PASS	AB=0.548;AC=35;AF=0.625;AN=56;BaseQRankSum=-4.010;DP=532;FS=0.396;HRun=0;HaplotypeScore=82.0157;InbreedingCoeff=0.8796;MQ=72.01;MQ0=2;MQRankSum=-3.064;QD=45.85;ReadPosRankSum=0.403;VQSLOD=5.1769;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,0:27:47.91:719,48,0	1/1:0,7:8:21.07:510,21,0	0/0:38,0:18:37.23:0,37,365	0/0:19,0:10:1.69:0,2,64	1/1:0,1:29:77.87:1068,78,0	0/0:16,0:16:48.15:0,48,779	0/0:8,0:8:24.08:0,24,404	1/1:1,25:34:98.26:1747,98,0	1/1:0,7:12:21.07:523,21,0	1/1:0,16:21:60.13:1125,60,0	1/1:2,13:17:39.13:765,39,0	0/0:18,0:18:51.12:0,51,832	0/0:15,0:15:45.12:0,45,680	0/0:13,0:13:39.13:0,39,643	1/1:0,15:21:36.12:876,36,0	0/1:3,0:17:11.09:162,0,11	1/1:0,14:20:48.11:1084,48,0	1/1:0,0:10:26.64:196,27,0	1/1:2,16:24:60.20:1295,60,0	1/1:2,30:34:66.84:1964,67,0	1/1:0,7:7:6.02:157,6,0	0/0:7,0:7:21.02:0,21,310	0/0:16,0:16:48.14:0,48,772	0/0:7,0:7:21.06:0,21,327	1/1:1,18:21:45.15:1115,45,0	1/1:3,22:32:96.28:2071,96,0	1/1:1,17:19:44.78:1091,45,0	1/1:1,11:17:27.09:679,27,0
chr10	57877386	.	GT	G	2625.27	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=0.449;DP=790;FS=11.768;HRun=6;HaplotypeScore=115.0877;InbreedingCoeff=0.9999;MQ=63.92;MQ0=2;MQRankSum=0.808;QD=25.00;ReadPosRankSum=3.040;VQSLOD=2.3599;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,50:53:99:1386,129,0	0/0:17,0:17:48.16:0,48,631	0/0:24,0:21:50.38:0,50,570	0/0:20,0:15:38.40:0,38,417	1/1:3,26:29:75.18:802,75,0	0/0:18,0:18:45.15:0,45,592	0/0:17,0:17:42.14:0,42,546	0/0:34,0:34:87.27:0,87,1116	0/0:31,0:31:78.25:0,78,1011	0/0:33,0:33:90.29:0,90,1182	0/0:21,0:21:63.19:0,63,811	0/0:24,0:24:72.23:0,72,947	0/0:25,0:25:69.22:0,69,907	0/0:35,0:35:90.27:0,90,1182	0/0:39,0:39:96.30:0,96,1244	0/0:39,0:39:99:0,108,1402	0/0:33,0:31:81.26:0,81,1057	1/1:0,23:23:54.14:580,54,0	0/0:41,0:41:99:0,120,1528	0/0:20,0:20:57.17:0,57,724	0/0:23,0:23:51.15:0,51,656	0/0:23,0:23:63.20:0,63,827	0/0:27,0:27:75.24:0,75,974	0/0:27,0:27:75.18:0,75,938	0/0:31,0:31:84.27:0,84,1104	0/0:34,0:34:96.29:0,96,1235	0/0:36,0:36:99:0,99,1247	0/0:13,0:13:39.11:0,39,496
chr10	57877405	.	G	GT	9418.36	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-13.765;DP=799;FS=1.691;HRun=8;HaplotypeScore=91.8561;InbreedingCoeff=0.9987;MQ=60.75;MQ0=11;MQRankSum=0.029;QD=24.79;ReadPosRankSum=1.907;VQSLOD=5.3622;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:53:99:0,114,1117	1/1:2,12:14:33.10:381,33,0	0/0:27,0:16:33.02:0,33,300	0/0:26,0:20:18.03:0,18,267	0/0:31,0:31:81.04:0,81,741	0/0:19,0:19:54.01:0,54,487	0/0:23,0:23:60.02:0,60,549	1/1:6,26:32:54.58:842,55,0	1/1:6,21:27:54.16:620,54,0	1/1:1,24:25:72.19:819,72,0	1/1:5,15:20:39.07:435,39,0	0/0:27,0:27:75.04:0,75,686	0/0:27,0:27:81.04:0,81,741	0/0:35,0:35:81:0,81,736	1/1:6,31:37:78.23:900,78,0	0/0:35,0:35:96.03:0,96,874	1/1:8,23:30:55.60:633,56,0	0/0:31,0:31:61.27:0,61,595	1/1:17,21:36:63.10:699,63,0	1/1:3,18:21:51.15:585,51,0	1/1:4,15:19:33.10:381,33,0	0/0:28,0:28:72.04:0,72,658	0/0:30,0:30:77.99:0,78,706	0/0:27,0:27:40.21:0,40,502	1/1:5,25:30:72.21:831,72,0	1/1:7,24:31:72.20:820,72,0	1/1:3,38:41:96.27:1091,96,0	1/1:1,12:13:33.10:381,33,0
chr10	57877914	.	GA	G	13049.34	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=13.717;DP=741;FS=12.421;HRun=7;HaplotypeScore=81.6178;InbreedingCoeff=0.9998;MQ=81.93;MQ0=0;MQRankSum=-2.849;QD=26.58;ReadPosRankSum=2.390;VQSLOD=4.7499;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,42:43:99:1193,117,0	1/1:1,10:11:27.06:275,27,0	0/0:26,0:26:63.18:0,63,760	0/0:21,0:21:36.79:0,37,591	1/1:3,25:28:75.13:753,75,0	0/0:23,0:23:66.21:0,66,830	0/0:34,0:34:84.25:0,84,1042	1/1:5,47:52:99:1394,141,0	1/1:3,25:28:66.15:673,66,0	1/1:0,21:21:60.08:594,60,0	1/1:2,18:20:51.11:518,51,0	0/0:30,0:30:84.25:0,84,1032	0/0:26,0:26:69.22:0,69,868	0/0:22,0:22:63.16:0,63,752	1/1:3,32:35:90.20:918,90,0	1/1:1,37:38:99:1071,105,0	1/1:3,24:27:72.16:735,72,0	1/1:0,12:12:33.08:337,33,0	1/1:3,25:28:75.13:744,75,0	1/1:1,27:28:75.16:762,75,0	1/1:4,23:27:63.14:643,63,0	0/0:17,0:17:48.15:0,48,603	0/0:27,0:27:72.21:0,72,881	0/0:24,0:24:69.20:0,69,845	1/1:1,23:24:66.15:673,66,0	1/1:1,21:22:57.09:573,57,0	1/1:2,30:32:75.17:765,75,0	1/1:1,14:15:42.10:428,42,0
chr10	57878380	.	TTTA	T	17332.64	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=17.276;DP=872;FS=5.066;HRun=0;HaplotypeScore=140.8718;InbreedingCoeff=0.9977;MQ=84.77;MQ0=0;MQRankSum=-6.014;QD=43.33;ReadPosRankSum=3.383;VQSLOD=6.4424;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,144,3275	1/1:0,12:12:30.10:512,30,0	0/0:23,0:23:60.18:0,60,1263	0/0:35,0:35:90.12:0,90,1927	0/0:41,0:41:99:0,120,2755	0/0:28,0:28:81.28:0,81,1868	0/0:28,0:28:84.29:0,84,1937	1/1:3,22:25:60.16:966,60,0	1/1:1,35:36:93.32:1585,93,0	1/1:0,33:33:96.80:1629,97,0	1/1:1,26:27:72.25:1228,72,0	0/0:47,0:47:99:0,141,3205	0/0:30,0:30:90.31:0,90,2064	0/0:32,0:32:96.33:0,96,2182	1/1:0,58:58:99:2762,163,0	0/0:54,0:54:99:0,157,3598	1/1:1,28:29:60.21:1020,60,0	0/0:19,0:19:57.20:0,57,1313	1/1:2,20:22:60.21:1023,60,0	1/1:0,21:21:57.15:941,57,0	1/1:1,35:36:77.37:1329,77,0	0/0:20,0:20:57.20:0,57,1302	0/0:36,0:36:99:0,108,2478	0/0:31,0:31:84.29:0,84,1924	1/1:1,19:20:36.12:614,36,0	1/1:0,29:29:87.30:1475,87,0	1/1:1,45:45:99:1993,117,0	1/1:0,6:6:15.05:256,15,0
chr10	57883292	.	G	GA	4439.19	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-12.752;DP=730;FS=0.370;HRun=5;HaplotypeScore=68.5357;InbreedingCoeff=0.9948;MQ=86.92;MQ0=0;MQRankSum=-2.693;QD=35.80;ReadPosRankSum=2.714;VQSLOD=4.6540;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,34:38:99:1300,99,0	0/0:6,0:6:15.04:0,15,161	0/0:30,0:30:73.86:0,74,863	0/0:20,0:20:39.14:0,39,495	1/1:2,19:21:57.18:744,57,0	0/0:19,0:19:54.07:0,54,566	0/0:32,0:32:84.21:0,84,901	0/0:38,0:38:99:0,102,1082	0/0:27,0:27:78.17:0,78,823	0/0:25,0:25:66.15:0,66,702	0/0:10,0:10:30.08:0,30,322	0/0:24,0:24:69.17:0,69,741	0/0:26,0:26:66.15:0,66,700	0/0:35,0:35:90.22:0,90,965	0/0:34,0:34:96.23:0,96,1024	1/1:2,37:39:99:1448,111,0	0/0:33,0:33:90.16:0,90,938	1/1:1,25:26:72.23:947,72,0	0/0:21,0:21:63.16:0,63,676	0/0:23,0:23:63.16:0,63,674	0/0:25,0:25:69.17:0,69,741	0/0:14,0:14:42.09:0,42,443	0/0:23,0:23:63.15:0,63,677	0/0:46,0:46:99:0,129,1377	0/0:25,0:25:72.12:0,72,752	0/0:27,0:27:81.20:0,81,871	0/0:35,0:35:93.21:0,93,990	0/0:8,0:8:24.06:0,24,257
chr10	57884791	.	TAC	T	4028.71	PASS	AB=0.951;AC=9;AF=0.161;AN=56;BaseQRankSum=11.132;DP=761;FS=1.693;HRun=0;HaplotypeScore=95.1849;InbreedingCoeff=0.8622;MQ=82.25;MQ0=0;MQRankSum=-0.791;QD=24.12;ReadPosRankSum=1.422;VQSLOD=4.4755;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,39:45:99:1351,105,0	0/0:19,0:19:57.19:0,57,948	0/1:37,2:39:31.37:31,0,1094	0/0:26,0:27:13.41:0,13,818	1/1:4,23:27:66.18:832,66,0	0/0:19,0:19:54.18:0,54,906	0/0:30,0:30:72.23:0,72,1184	0/0:32,0:32:78.27:0,78,1310	0/0:15,0:15:33.11:0,33,556	0/0:31,0:31:66.23:0,66,1109	0/0:16,0:16:39.13:0,39,653	0/0:23,1:24:46.31:0,46,1037	0/0:32,0:32:84.29:0,84,1399	0/0:30,0:30:84.29:0,84,1406	0/0:28,0:28:75.26:0,75,1256	1/1:0,29:29:78.25:1004,78,0	0/0:37,0:37:99:0,99,1637	1/1:6,21:27:63.20:810,63,0	0/0:27,0:27:75.23:0,75,1213	0/0:13,0:13:33.11:0,33,553	0/0:32,0:31:84.25:0,84,1364	0/0:20,0:20:57.18:0,57,936	0/0:21,0:21:57.20:0,57,962	0/0:40,0:40:99:0,108,1783	0/0:26,0:26:63.20:0,63,1027	0/0:30,0:30:81.28:0,81,1347	0/0:35,0:35:90.31:0,90,1507	0/0:10,0:10:30.10:0,30,501
chr10	57887275	.	TCACACACACACACACA	T	160.92	PASS	AB=0.826;AC=3;AF=0.058;AN=52;BaseQRankSum=2.425;DP=530;FS=2.623;HRun=0;HaplotypeScore=212.3785;InbreedingCoeff=0.3533;MQ=70.57;MQ0=7;MQRankSum=-2.163;QD=2.77;ReadPosRankSum=-0.181;VQSLOD=2.1255;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:30,9:39:6.02:204,6,0	0/0:4,0:4:9.03:0,9,162	./.	0/0:44,0:37:1.25:0,1,3	./.	0/0:13,0:13:6.02:0,6,280	0/0:32,0:32:41.13:0,41,2052	0/0:18,0:18:9.02:0,9,170	0/0:11,0:11:6.02:0,6,132	0/0:17,0:17:21.53:0,22,492	0/0:15,0:15:30.09:0,30,755	0/0:8,0:8:6.02:0,6,277	0/0:14,0:13:10.59:0,11,640	0/0:8,0:8:9.02:0,9,324	0/0:15,0:15:18.52:0,19,385	0/1:15,0:19:49.86:50,0,58	0/0:34,0:34:29.95:0,30,302	0/0:16,0:24:30.10:0,30,1610	0/0:12,0:12:9.03:0,9,175	0/0:13,0:13:18.06:0,18,439	0/0:20,0:18:12.03:0,12,276	0/0:11,0:15:18.06:0,18,920	0/0:11,0:11:18.53:0,19,873	0/0:34,0:34:39.10:0,39,1731	0/0:16,0:15:12.04:0,12,273	0/0:20,0:20:30:0,30,704	0/0:11,0:11:15.05:0,15,391	0/0:14,0:13:33.09:0,33,689
chr10	57887320	.	CACACACACA	C	2341.32	PASS	AB=0.959;AC=23;AF=0.411;AN=56;BaseQRankSum=10.193;DP=617;FS=75.151;HRun=0;HaplotypeScore=135.7295;InbreedingCoeff=0.4012;MQ=48.39;MQ0=71;MQRankSum=-1.490;QD=7.83;ReadPosRankSum=-1.799;VQSLOD=-0.6375;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:31:3.92:0,4,519	1/1:9,0:5:11.88:121,12,0	0/0:30,0:10:28.89:0,29,306	0/0:33,0:13:39.09:0,39,423	0/0:13,0:12:18.02:0,18,202	0/0:15,0:15:36.01:0,36,657	0/0:37,0:34:81.47:0,81,1953	0/1:18,0:15:41.50:177,0,42	1/1:16,0:14:6.48:67,6,0	0/1:22,0:18:21.80:219,0,22	0/1:17,0:15:4.79:172,0,5	0/0:23,0:22:48.15:0,48,944	0/0:19,0:18:46.02:0,46,1032	0/0:18,0:17:39.12:0,39,694	1/1:28,1:24:14.86:217,15,0	0/1:14,0:12:72.26:72,0,195	1/1:17,24:27:9.18:294,9,0	0/0:28,0:27:55.34:0,55,1304	1/1:15,0:10:6.79:120,7,0	0/1:14,0:12:19.65:157,0,20	0/1:22,15:24:26.04:107,0,26	0/0:16,0:16:27.09:0,27,645	0/0:16,0:16:24.13:0,24,603	0/0:38,0:38:93.29:0,93,2023	1/1:10,0:8:2.61:32,3,0	0/1:25,0:25:70.79:249,0,71	1/1:19,0:14:24.55:242,25,0	1/1:11,2:12:9.15:287,9,0
chr10	57888473	.	TA	T	16088.06	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=10.723;DP=665;FS=1.744;HRun=2;HaplotypeScore=65.9378;InbreedingCoeff=0.9988;MQ=80.71;MQ0=0;MQRankSum=-4.031;QD=35.36;ReadPosRankSum=3.193;VQSLOD=5.3839;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,29:30:72.23:930,72,0	1/1:0,7:7:21.07:273,21,0	0/0:23,0:23:68.44:0,68,977	0/0:17,0:17:42.02:0,42,558	1/1:1,28:29:78.25:1013,78,0	0/0:27,0:27:81.22:0,81,1161	0/0:23,0:23:69.23:0,69,1015	1/1:0,24:24:72.14:883,72,0	1/1:0,18:18:48.16:623,48,0	1/1:0,33:33:99:1270,99,0	1/1:1,13:14:36.12:467,36,0	0/0:18,0:18:54.18:0,54,807	0/0:24,0:24:72.22:0,72,1036	0/0:16,0:16:48.16:0,48,715	1/1:0,35:35:93.30:1207,93,0	1/1:0,27:27:72.23:933,72,0	1/1:0,24:24:63.20:818,63,0	1/1:0,26:26:69.22:896,69,0	1/1:3,21:24:62.29:816,62,0	1/1:0,28:28:81.19:1016,81,0	1/1:1,27:28:78.25:1013,78,0	0/0:13,0:13:39.13:0,39,582	0/0:22,0:22:60.19:0,60,873	0/0:27,0:27:81.26:0,81,1190	1/1:0,32:32:90.29:1169,90,0	1/1:0,25:25:75.24:972,75,0	1/1:1,39:40:99:1519,117,0	1/1:0,11:11:21.07:273,21,0
chr10	57891660	.	G	GT	667	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-5.540;DP=587;FS=6.421;HRun=8;HaplotypeScore=59.2738;InbreedingCoeff=0.8195;MQ=68.76;MQ0=1;MQRankSum=-1.877;QD=25.65;ReadPosRankSum=2.049;VQSLOD=4.5700;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:90.03:0,90,823	0/0:6,0:6:12:0,12,110	0/0:16,0:15:29.97:0,30,264	0/0:22,0:22:23.10:0,23,296	0/0:19,0:19:51.03:0,51,466	0/0:22,0:22:59.86:0,60,532	0/0:19,0:19:54:0,54,485	0/0:33,0:33:63:0,63,576	0/0:18,0:18:42.01:0,42,380	0/0:23,0:23:66.03:0,66,604	0/0:9,0:11:26.05:0,26,226	0/0:21,0:21:57.03:0,57,521	0/0:26,0:26:69.02:0,69,627	0/0:16,0:16:45.02:0,45,412	0/0:21,0:21:63:0,63,565	1/1:4,22:26:66.20:762,66,0	0/0:29,0:29:78.04:0,78,714	0/0:14,0:14:32.97:0,33,293	0/0:19,0:20:50.02:0,50,436	0/0:25,0:25:60.01:0,60,549	0/0:24,2:26:2.70:0,3,523	0/0:19,0:19:48.02:0,48,439	0/0:16,0:16:46.84:0,47,416	0/0:22,0:22:48.01:0,48,439	0/0:20,0:20:41.98:0,42,379	0/0:25,0:25:63.50:0,64,577	0/0:23,0:23:53.99:0,54,489	0/0:14,0:14:42.02:0,42,384
chr10	57892008	.	G	GAAAAC	3637.80	PASS	AB=0.618;AC=7;AF=0.125;AN=56;BaseQRankSum=-9.615;DP=634;FS=12.528;HRun=0;HaplotypeScore=112.0875;InbreedingCoeff=0.7672;MQ=72.03;MQ0=1;MQRankSum=0.288;QD=36.02;ReadPosRankSum=1.999;VQSLOD=3.1506;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,15:29:23.07:862,23,0	0/0:8,0:8:9.03:0,9,165	0/0:30,0:24:8.99:0,9,124	0/0:26,0:17:11.25:0,11,98	1/1:9,19:28:51.17:1286,51,0	0/0:26,0:26:57.19:0,57,1030	0/0:19,0:19:42.14:0,42,765	0/0:32,0:32:42.10:0,42,639	0/0:20,0:20:39.13:0,39,710	0/0:27,0:27:42.13:0,42,716	0/0:17,0:17:33.07:0,33,538	0/0:20,0:20:36.11:0,36,630	0/0:24,0:24:42.13:0,42,729	0/0:26,0:26:45.15:0,45,792	0/0:27,0:27:60.17:0,60,1033	0/1:8,11:21:22.03:813,0,22	0/0:22,0:22:36.09:0,36,600	1/1:11,11:23:24.08:677,24,0	0/0:23,0:23:30.08:0,30,487	0/0:27,0:27:39.12:0,39,678	0/0:19,0:19:42.14:0,42,764	0/0:12,0:12:18.06:0,18,325	0/0:17,0:17:42.13:0,42,742	0/0:23,0:23:51.16:0,51,899	0/0:24,0:24:51.13:0,51,806	0/0:31,0:30:60.19:0,60,1030	0/0:28,0:28:60.17:0,60,1037	0/0:5,0:5:6.02:0,6,110
chr10	57893290	.	TG	T	4478.68	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=11.883;DP=740;FS=6.010;HRun=1;HaplotypeScore=72.0702;InbreedingCoeff=0.9988;MQ=79.33;MQ0=0;MQRankSum=-2.022;QD=37.95;ReadPosRankSum=2.317;VQSLOD=5.5307;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,41:42:66.72:1504,67,0	0/0:8,0:8:24.06:0,24,360	0/0:27,0:27:78.19:0,78,1127	0/0:17,0:17:36.11:0,36,554	1/1:0,27:27:81.27:1132,81,0	0/0:25,0:25:75.24:0,75,1171	0/0:24,0:24:72.23:0,72,1127	0/0:30,0:30:90.31:0,90,1438	0/0:26,0:26:78.27:0,78,1244	0/0:26,0:26:72.24:0,72,1132	0/0:23,0:23:69.22:0,69,1076	0/0:33,0:33:99:0,99,1583	0/0:28,0:28:84.27:0,84,1319	0/0:21,0:21:63.21:0,63,1005	0/0:53,0:53:99:0,157,2472	1/1:0,34:34:90.30:1259,90,0	0/0:27,0:27:81.26:0,81,1265	1/1:0,15:15:42.14:584,42,0	0/0:16,0:16:48.16:0,48,765	0/0:34,0:34:99:0,102,1608	0/0:24,0:24:72.25:0,72,1151	0/0:24,0:24:72.25:0,72,1151	0/0:18,0:18:54.18:0,54,863	0/0:34,0:34:99:0,99,1583	0/0:28,0:28:84.29:0,84,1341	0/0:33,0:33:99:0,99,1580	0/0:35,0:34:99:0,105,1601	0/0:8,0:8:24.08:0,24,384
chr10	57894489	.	CGTGTGTGTGTGTGTGTGTGTGT	C	2546.79	PASS	AB=0.842;AC=19;AF=0.365;AN=52;BaseQRankSum=4.891;DP=548;FS=1.869;HRun=0;HaplotypeScore=265.9358;InbreedingCoeff=0.5711;MQ=60.24;MQ0=22;MQRankSum=-0.005;QD=12.80;ReadPosRankSum=1.786;VQSLOD=2.4345;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:16:12.03:0,12,369	0/1:7,0:11:3.23:44,0,3	0/0:31,0:16:6.02:0,6,74	0/0:39,0:21:16.85:0,17,262	0/0:11,0:13:24.97:0,25,1251	0/0:18,0:16:18.06:0,18,1197	0/0:21,0:21:21.05:0,21,1042	0/1:24,0:23:20.93:26,0,21	1/1:7,0:8:3.01:91,3,0	1/1:17,4:23:7.73:521,8,0	./.	0/0:23,0:22:26.94:0,27,1885	0/0:19,0:19:21.07:0,21,1678	0/0:30,0:29:40.83:0,41,2271	1/1:11,2:18:1.37:114,1,0	0/0:24,0:24:30.57:0,31,2520	0/1:17,1:22:48.88:334,0,49	0/0:8,0:8:8.99:0,9,183	1/1:16,0:17:3.01:118,3,0	./.	1/1:26,0:26:11.08:147,11,0	0/0:13,0:13:18.06:0,18,1519	0/0:20,0:19:15.01:0,15,471	0/0:29,0:28:51.16:0,51,3079	0/0:16,3:20:1.60:0,2,3	1/1:17,8:27:30.08:1037,30,0	1/1:6,3:10:6.02:175,6,0	1/1:11,0:9:6.02:111,6,0
chr10	57894537	.	T	TGAGAGAGAGA	3068.12	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=8.089;DP=533;FS=12.924;HRun=0;HaplotypeScore=170.8949;InbreedingCoeff=0.2525;MQ=43.72;MQ0=30;MQRankSum=-0.251;QD=11.53;ReadPosRankSum=-3.442;VQSLOD=1.0734;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:8,2:16:0.83:77,1,0	1/1:11,0:11:11.97:165,12,0	0/1:3,0:1:0:0,0,0	0/0:4,0:2:6.02:0,6,173	1/1:28,0:27:15:214,15,0	0/0:22,0:20:8.91:0,9,362	0/0:25,0:23:21.11:0,21,967	0/1:16,0:16:99:176,0,183	1/1:9,0:8:3.94:26,4,0	0/1:16,0:15:99:280,0,114	1/1:15,0:13:5.64:92,6,0	0/0:32,0:30:56.49:0,56,1554	0/0:19,0:18:23.52:0,24,493	0/0:37,0:36:47.70:0,48,798	0/1:28,0:26:53.64:334,0,54	0/0:34,0:34:61.58:0,62,1477	0/1:24,0:22:12.47:92,0,12	0/0:5,0:5:11.73:0,12,73	0/1:18,0:15:99:290,0,120	1/1:10,0:9:9.02:156,9,0	0/0:18,0:13:3.44:0,3,99	0/0:18,0:18:28.98:0,29,615	0/0:17,0:15:18.53:0,19,573	0/0:36,0:33:27.88:0,28,1615	1/1:15,0:15:6.02:167,6,0	0/1:29,0:27:49.36:636,0,49	0/1:18,0:15:16.20:329,0,16	0/1:8,0:5:4.92:211,0,5
chr10	57895301	.	AAGACAG	A	11900.67	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=16.767;DP=608;FS=14.251;HRun=0;HaplotypeScore=142.2580;InbreedingCoeff=0.9976;MQ=84.95;MQ0=0;MQRankSum=-16.484;QD=46.13;ReadPosRankSum=0.248;VQSLOD=4.2002;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,144,4840	1/1:1,8:9:24.08:552,24,0	0/0:17,0:17:45.15:0,45,1487	0/0:28,0:28:51.42:0,51,1992	0/0:18,0:18:54.17:0,54,1783	0/0:20,0:20:54.17:0,54,1698	0/0:32,0:32:96.28:0,96,3041	1/1:3,32:35:93.21:1917,93,0	1/1:2,14:16:39.13:889,39,0	1/1:5,16:21:45.13:985,45,0	1/1:4,7:11:21.07:470,21,0	0/0:37,0:37:93.28:0,93,2932	0/0:22,0:22:57.20:0,57,1857	0/0:27,0:27:75.23:0,75,2462	1/1:6,21:27:48.13:1056,48,0	0/0:27,0:27:78.27:0,78,2642	1/1:2,25:27:42.11:908,42,0	0/0:10,0:10:27.09:0,27,875	1/1:3,11:14:36.10:719,36,0	1/1:1,11:12:30.07:631,30,0	1/1:4,17:21:27.01:510,27,0	0/0:12,0:12:36.09:0,36,930	0/0:10,0:10:30.09:0,30,961	0/0:40,0:40:99:0,114,3847	1/1:1,16:17:42.14:931,42,0	1/1:3,14:17:42.14:954,42,0	1/1:4,18:22:45.11:963,45,0	1/1:0,9:9:18.06:414,18,0
chr10	57896544	.	GTGCT	G	15670.69	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=13.989;DP=585;FS=3.324;HRun=0;HaplotypeScore=104.3123;InbreedingCoeff=0.9825;MQ=73.73;MQ0=2;MQRankSum=-4.999;QD=42.58;ReadPosRankSum=3.106;VQSLOD=5.1927;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,41:41:99:1904,102,0	1/1:1,11:12:27.09:495,27,0	0/0:7,0:7:17.74:0,18,326	0/0:16,0:16:42.26:0,42,820	1/1:1,16:17:30.10:560,30,0	0/0:11,0:11:33.11:0,33,802	0/0:40,0:40:99:0,117,3114	1/1:1,15:16:42.12:695,42,0	1/1:1,13:14:24.08:448,24,0	1/1:1,12:13:39.13:720,39,0	1/1:1,4:5:9.03:168,9,0	0/0:33,0:33:99:0,99,2602	0/0:20,0:20:54.18:0,54,1364	0/0:19,0:19:54.19:0,54,1393	1/1:0,26:26:69.24:1288,69,0	1/1:2,21:23:57.20:1064,57,0	1/1:4,25:29:66.23:1232,66,0	1/1:0,24:24:60.21:1102,60,0	1/1:2,16:18:48.16:849,48,0	1/1:2,7:9:15.05:280,15,0	1/1:3,57:59:99:2070,110,0	0/0:19,0:19:57.20:0,57,1514	0/0:15,0:15:39.13:0,39,1040	0/0:37,0:37:99:0,111,2908	1/1:0,14:14:30.10:560,30,0	1/1:0,20:20:60.21:1120,60,0	1/1:2,18:20:48:895,48,0	1/1:0,6:6:12.04:224,12,0
chr10	57900289	.	TG	T	1599.98	PASS	AB=1.000;AC=37;AF=0.661;AN=56;BaseQRankSum=2.911;DP=286;FS=16.480;HRun=13;HaplotypeScore=60.3151;InbreedingCoeff=0.7168;MQ=77.99;MQ0=0;MQRankSum=-1.706;QD=7.31;ReadPosRankSum=3.150;VQSLOD=0.7877;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,1:14:16.40:66,16,0	1/1:0,2:2:0.94:2,1,0	0/0:28,0:17:11.64:0,12,107	0/1:14,0:9:3.37:3,0,29	1/1:5,0:17:18.39:59,18,0	0/0:3,0:3:5.80:0,6,41	0/0:6,0:5:8.50:0,8,45	1/1:9,0:9:9.75:54,10,0	1/1:5,5:10:20.79:131,21,0	1/1:8,5:13:14.89:109,15,0	1/1:5,6:13:23.39:136,23,0	0/0:4,0:4:2.74:0,3,12	0/0:8,0:8:8.84:0,9,60	0/0:1,0:1:2.99:0,3,24	1/1:9,10:19:38.67:252,39,0	1/1:9,0:17:30.88:108,31,0	1/1:4,7:11:23.55:164,24,0	1/1:3,0:9:13.07:46,13,0	1/1:6,1:8:10.13:64,10,0	1/1:4,5:10:13.55:84,14,0	1/1:4,8:12:15.54:98,16,0	0/0:8,0:8:5.99:0,6,51	0/0:1,0:1:3:0,3,28	0/0:8,0:8:5.97:0,6,45	1/1:6,7:13:12.38:88,12,0	1/1:3,4:7:11.93:87,12,0	1/1:8,5:14:25.84:162,26,0	1/1:3,3:6:10.19:68,10,0
chr10	57901579	.	TTGTGTGTGTGTG	T	3129.77	PASS	AC=32;AF=0.667;AN=48;BaseQRankSum=8.415;DP=575;FS=0.000;HRun=0;HaplotypeScore=202.9908;InbreedingCoeff=0.7440;MQ=53.11;MQ0=24;MQRankSum=-6.049;QD=8.84;ReadPosRankSum=0.603;VQSLOD=2.4993;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:19,2:22:4.26:76,4,0	./.	./.	./.	1/1:18,1:26:0.08:1,0,0	0/0:24,0:24:24.08:0,24,1064	0/0:32,0:32:19.42:0,19,859	1/1:27,0:27:2.98:21,3,0	1/1:13,8:23:12.51:404,13,0	./.	1/1:15,2:17:4.50:78,4,0	0/0:21,0:20:33.08:0,33,1393	0/0:17,0:15:18.06:0,18,939	0/0:25,0:25:30.57:0,31,1560	1/1:22,5:30:7.77:81,8,0	1/1:14,11:27:23.91:601,24,0	1/1:17,1:16:6.02:199,6,0	1/1:21,0:21:3.01:55,3,0	1/1:10,1:13:9.03:281,9,0	1/1:22,5:27:9.03:269,9,0	1/1:20,1:17:0.89:2,1,0	0/0:22,0:22:18.06:0,18,829	0/0:11,0:14:15.51:0,16,385	0/0:22,0:21:27.56:0,28,564	1/1:15,3:19:9.03:253,9,0	1/1:15,3:18:15.02:421,15,0	1/1:18,6:26:12.51:371,13,0	1/1:8,4:9:6.02:190,6,0
chr10	57901643	.	G	GACAGAC	4497.53	PASS	AB=0.748;AC=19;AF=0.352;AN=54;BaseQRankSum=2.387;DP=725;FS=1.595;HRun=0;HaplotypeScore=202.1392;InbreedingCoeff=0.2532;MQ=45.78;MQ0=56;MQRankSum=-3.946;QD=11.62;ReadPosRankSum=-0.436;VQSLOD=4.1332;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:26:0:0,0,0	0/1:2,6:6:0:0,0,0	0/0:16,0:11:30.95:0,31,537	0/0:22,0:16:36.06:0,36,596	1/1:27,0:24:17.09:366,17,0	0/0:30,0:28:66.20:0,66,1416	0/0:27,0:25:28.62:0,29,852	0/1:42,0:39:99:543,0,169	0/1:16,10:26:2.89:160,0,3	1/1:6,12:17:26.20:1085,26,0	0/0:14,10:25:0.21:0,0,1	0/0:29,0:29:54.86:0,55,994	0/0:21,0:16:33.09:0,33,691	0/0:20,0:19:48:0,48,855	0/1:17,18:35:0:0,0,0	0/1:37,0:35:3.41:73,0,3	0/1:10,5:16:41.42:74,0,41	0/1:13,3:16:99:144,0,143	0/1:13,7:22:44.86:554,0,45	0/1:18,10:28:2.65:69,0,3	./.	0/0:25,0:24:51.17:0,51,1115	0/0:20,0:19:33.25:0,33,702	0/0:38,0:35:83.28:0,83,1655	1/1:10,5:17:0.46:34,0,0	0/1:19,8:26:4.95:897,0,5	0/1:20,9:28:73.36:236,0,73	1/1:13,0:12:12.29:261,12,0
chr10	57903979	.	TGGACATGG	T	1899.34	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=5.634;DP=664;FS=0.000;HRun=0;HaplotypeScore=181.7977;InbreedingCoeff=0.9907;MQ=82.66;MQ0=0;MQRankSum=-7.168;QD=46.33;ReadPosRankSum=-0.284;VQSLOD=3.0461;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,135,5290	1/1:0,7:7:18.06:491,18,0	0/0:19,0:19:45.13:0,45,1511	0/0:23,0:23:63.19:0,63,2299	0/0:26,0:26:63.19:0,63,2540	0/0:23,0:23:57.15:0,57,2150	0/0:17,0:17:45.13:0,45,1674	1/1:4,15:19:45.14:1139,45,0	0/0:23,0:23:63.22:0,63,2681	0/0:41,0:41:99:0,114,4663	0/0:15,0:15:36.12:0,36,1516	0/0:29,0:29:78.26:0,78,3162	0/0:23,0:23:66.23:0,66,2723	0/0:31,0:31:90.29:0,90,3768	0/0:26,0:26:78.26:0,78,3178	0/0:26,0:26:72.25:0,72,3013	1/1:5,10:15:14.89:409,15,0	0/0:17,0:17:45.15:0,45,1765	0/0:24,0:24:51.18:0,51,2110	0/0:24,0:24:66.23:0,66,2846	0/0:25,0:25:69.24:0,69,2923	0/0:12,0:12:36.12:0,36,1503	0/0:32,0:32:81.26:0,81,3378	0/0:35,0:35:99:0,105,4225	0/0:22,0:22:63.19:0,63,2520	0/0:21,0:21:63.22:0,63,2637	0/0:29,0:29:84.29:0,84,3607	0/0:9,0:9:27.09:0,27,1124
chr10	57904243	.	A	AAAAAAC	8903.97	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-0.927;DP=674;FS=3.317;HRun=0;HaplotypeScore=153.2150;InbreedingCoeff=0.9233;MQ=72.76;MQ0=6;MQRankSum=-3.302;QD=19.57;ReadPosRankSum=0.172;VQSLOD=4.5985;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:3,0:29:33.06:430,33,0	1/1:1,0:6:9.03:145,9,0	0/0:38,0:20:11.91:0,12,226	0/0:25,0:20:28.78:0,29,244	1/1:8,0:35:55.40:815,55,0	0/0:26,0:25:50.25:0,50,768	0/0:12,0:12:35.83:0,36,542	1/1:10,0:40:93.24:1047,93,0	1/1:2,0:16:24.01:342,24,0	1/1:4,0:33:78.80:896,79,0	1/1:4,0:25:47.27:507,47,0	0/0:15,0:15:37.52:0,38,436	0/0:17,0:17:28.06:0,28,410	0/0:26,0:26:32.49:0,32,618	1/1:3,0:26:36.82:523,37,0	1/1:11,17:40:45.15:904,45,0	1/1:8,0:24:1.22:225,1,0	1/1:2,0:12:7.35:85,7,0	1/1:18,0:19:41.68:497,42,0	1/1:3,0:30:62.72:761,63,0	1/1:3,0:8:6.01:76,6,0	0/0:18,0:18:41.05:0,41,593	0/0:29,0:29:42.36:0,42,678	0/0:11,0:11:29.70:0,30,438	1/1:7,0:25:23.89:313,24,0	1/1:10,0:25:53.88:599,54,0	1/1:9,0:43:17.41:562,17,0	1/1:7,0:17:17.98:177,18,0
chr10	57905466	.	G	GA	2875.11	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-13.169;DP=663;FS=2.510;HRun=7;HaplotypeScore=63.9344;InbreedingCoeff=0.9988;MQ=79.48;MQ0=0;MQRankSum=-6.061;QD=29.95;ReadPosRankSum=3.573;VQSLOD=4.2550;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,29:30:78.24:942,78,0	0/0:9,0:9:23.97:0,24,216	0/0:25,0:25:53.56:0,54,609	0/0:17,0:17:26.97:0,27,303	1/1:3,19:22:60.18:716,60,0	0/0:25,0:25:75.10:0,75,718	0/0:25,0:25:69.04:0,69,648	0/0:48,0:48:99:0,129,1227	0/0:18,0:18:48.07:0,48,463	0/0:28,0:28:75.12:0,75,724	0/0:28,0:28:75.11:0,75,719	0/0:30,0:30:84.12:0,84,805	0/0:12,0:12:30.05:0,30,290	0/0:26,0:26:72.08:0,72,684	0/0:27,0:27:66.08:0,66,632	1/1:2,26:28:75.23:906,75,0	0/0:21,0:21:54.03:0,54,507	1/1:1,15:15:39.12:471,39,0	0/0:19,0:19:45.06:0,45,434	0/0:35,0:35:96.15:0,96,925	0/0:36,0:36:99:0,99,952	0/0:18,0:18:42.05:0,42,400	0/0:23,0:23:69.10:0,69,662	0/0:17,0:17:51.08:0,51,493	0/0:14,0:14:39.05:0,39,371	0/0:25,0:25:72.11:0,72,694	0/0:31,0:31:84.10:0,84,799	0/0:10,0:10:30:0,30,275
chr10	57906961	.	A	AAAAG	1362.95	PASS	AB=0.936;AC=27;AF=0.482;AN=56;BaseQRankSum=6.594;DP=522;FS=37.492;HRun=0;HaplotypeScore=82.3081;InbreedingCoeff=0.0148;MQ=51.80;MQ0=25;MQRankSum=-2.352;QD=3.25;ReadPosRankSum=6.718;VQSLOD=-0.4247;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:10,1:18:10.12:254,10,0	0/1:9,0:9:3.65:51,0,4	1/1:36,0:7:5.17:18,5,0	0/1:26,0:6:17.83:22,0,18	0/1:7,18:25:4.76:149,0,5	0/0:11,0:11:20.68:0,21,159	0/0:11,0:11:29.86:0,30,306	0/1:27,0:28:45.87:46,0,192	1/1:9,0:7:1.32:17,1,0	0/1:33,0:30:93.65:94,0,165	0/1:26,0:26:64.89:65,0,73	0/0:20,0:19:8.32:0,8,324	0/0:14,0:13:27.13:0,27,233	0/0:13,0:13:11.90:0,12,185	0/1:23,0:22:25.27:25,0,35	0/1:20,0:18:54.23:195,0,54	1/1:18,0:17:11.75:106,12,0	0/1:5,4:11:23.24:126,0,23	0/1:21,0:20:47.29:47,0,93	0/1:27,0:26:41.32:41,0,118	1/1:3,0:3:2.97:20,3,0	0/0:13,0:13:31.17:0,31,312	0/0:10,0:10:15.48:0,15,165	0/0:10,0:10:17.93:0,18,141	0/1:21,0:21:36.26:49,0,36	0/1:25,0:25:3.43:3,0,108	1/1:29,0:26:20.29:182,20,0	1/1:8,0:7:5.20:28,5,0
chr10	57906962	.	A	AAAAG	4822.57	PASS	AB=0.927;AC=32;AF=0.571;AN=56;BaseQRankSum=-6.201;DP=540;FS=14.734;HRun=0;HaplotypeScore=75.3951;InbreedingCoeff=0.5124;MQ=52.36;MQ0=24;MQRankSum=3.073;QD=11.94;ReadPosRankSum=0.514;VQSLOD=2.9290;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:18,0:18:76.04:107,0,76	1/1:0,7:10:14.96:248,15,0	0/0:34,0:5:8.83:0,9,58	0/1:25,0:6:9.51:10,0,25	0/1:28,0:25:13.48:13,0,73	0/0:11,0:11:19.81:0,20,161	0/0:11,0:11:30.05:0,30,337	1/1:12,0:33:68.78:667,69,0	1/1:4,0:8:5.99:74,6,0	1/1:14,18:30:39.17:684,39,0	1/1:10,1:26:28.54:330,29,0	0/0:20,0:19:24.54:0,25,353	0/0:14,0:13:25.81:0,26,244	0/0:13,0:13:17.98:0,18,177	0/1:5,15:22:1.74:160,0,2	0/1:20,0:18:33.58:34,0,193	1/1:4,11:17:12:193,12,0	0/1:12,0:11:13.79:23,0,14	1/1:9,13:27:46.77:540,47,0	1/1:8,1:27:14.55:393,15,0	1/1:0,0:3:3.01:39,3,0	0/0:13,0:13:38.76:0,39,379	0/0:10,0:10:17.99:0,18,197	0/0:10,0:10:14.63:0,15,123	1/1:6,1:21:4.31:242,4,0	1/1:7,18:26:53.48:553,53,0	1/1:8,19:26:22.95:386,23,0	1/1:6,4:12:6.40:125,6,0
chr10	57907187	.	GA	G	1490.86	PASS	AB=0.895;AC=7;AF=0.125;AN=56;BaseQRankSum=9.116;DP=569;FS=4.314;HRun=10;HaplotypeScore=59.1242;InbreedingCoeff=0.8236;MQ=75.97;MQ0=0;MQRankSum=-4.212;QD=15.69;ReadPosRankSum=0.565;VQSLOD=4.0091;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,37:43:99:865,101,0	0/0:7,0:8:23.90:0,24,246	0/0:16,1:17:12.97:0,13,331	0/1:15,2:16:33.70:34,0,148	1/1:1,11:13:35.03:292,35,0	0/0:33,0:34:87.07:0,87,943	0/0:23,0:23:58.04:0,58,632	0/0:31,1:32:46.14:0,46,736	0/0:10,0:10:30.08:0,30,332	0/0:26,0:26:69.18:0,69,754	0/0:20,0:20:54.14:0,54,590	0/0:17,0:17:22.69:0,23,442	0/0:24,0:25:66.01:0,66,708	0/0:23,1:25:33.93:0,34,578	0/0:21,0:21:60.11:0,60,641	0/0:27,0:28:72.01:0,72,761	0/0:16,0:16:42.11:0,42,457	1/1:3,18:22:53.02:449,53,0	0/0:14,0:14:39.11:0,39,430	0/0:18,1:19:28.09:0,28,538	0/0:16,0:16:39.09:0,39,423	0/0:12,0:12:33.06:0,33,342	0/0:16,0:16:29.99:0,30,307	0/0:19,0:19:51.14:0,51,564	0/0:13,0:15:38.94:0,39,412	0/0:22,0:22:51.60:0,52,552	0/0:34,0:34:93.14:0,93,978	0/0:5,0:5:15.04:0,15,166
chr10	57907936	.	TAA	T	6855.89	PASS	AB=0.601;AC=33;AF=0.589;AN=56;BaseQRankSum=2.418;DP=483;FS=2.006;HRun=13;HaplotypeScore=60.3316;InbreedingCoeff=0.7255;MQ=57.62;MQ0=28;MQRankSum=1.126;QD=18.99;ReadPosRankSum=4.618;VQSLOD=4.1545;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,18:23:42:407,42,0	1/1:2,8:10:5.44:185,5,0	0/0:21,0:6:14.40:0,14,150	0/0:12,0:3:6.16:0,6,46	1/1:6,19:25:53.75:507,54,0	0/0:12,0:12:36.09:0,36,483	0/0:11,0:10:27.05:0,27,353	1/1:6,21:27:65.77:623,66,0	1/1:2,7:9:18.01:175,18,0	1/1:7,17:22:51.04:493,51,0	1/1:3,14:17:42.03:407,42,0	0/0:15,0:13:36.07:0,36,479	0/0:10,2:12:1.16:0,1,360	0/0:12,0:11:32.70:0,33,441	1/1:2,20:20:57.09:553,57,0	0/1:3,1:14:0.64:1,0,73	1/1:7,26:33:75.06:727,75,0	1/1:3,13:15:33.05:320,33,0	0/1:5,7:11:9.96:180,0,10	1/1:3,20:21:53.94:506,54,0	1/1:1,3:5:2.93:79,3,0	0/0:4,0:5:14.53:0,15,164	0/0:12,0:12:33.08:0,33,439	0/0:10,0:10:18.04:0,18,241	1/1:8,21:27:53.28:502,53,0	1/1:12,21:32:46.32:591,46,0	1/1:5,17:20:47.81:448,48,0	0/1:4,7:11:22.03:154,0,22
chr10	57913474	.	A	ATG	10549.29	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=18.674;DP=582;FS=23.895;HRun=0;HaplotypeScore=136.5441;InbreedingCoeff=0.9832;MQ=68.07;MQ0=0;MQRankSum=-18.401;QD=47.52;ReadPosRankSum=4.730;VQSLOD=3.5828;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,126,2045	1/1:0,11:11:30.10:542,30,0	0/0:19,0:19:51.16:0,51,777	0/0:18,0:17:45.15:0,45,691	0/0:31,0:31:87.27:0,87,1363	0/0:18,0:18:51.17:0,51,832	0/0:33,0:33:93.27:0,93,1485	1/1:2,16:18:48.16:880,48,0	1/1:0,10:10:27.09:490,27,0	1/1:0,18:18:54.19:987,54,0	1/1:0,12:12:33.03:523,33,0	0/0:24,0:24:72.23:0,72,1151	0/0:23,0:23:69.18:0,69,1044	0/0:24,0:24:72.25:0,72,1172	1/1:2,30:32:93.32:1653,93,0	0/0:26,0:26:78.25:0,78,1220	1/1:0,12:12:21.07:376,21,0	0/0:35,0:35:99:0,99,1573	1/1:0,6:6:18.06:328,18,0	1/1:0,17:17:42.10:717,42,0	1/1:0,11:12:20.80:363,21,0	0/0:26,0:26:75.21:0,75,1174	0/0:16,0:16:45.14:0,45,709	0/0:23,0:23:69.24:0,69,1120	1/1:0,17:17:45.15:814,45,0	1/1:0,24:25:72.25:1300,72,0	1/1:0,28:28:81.28:1468,81,0	1/1:0,2:4:6.02:108,6,0
chr10	57914509	.	AG	A	12651.74	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=14.415;DP=698;FS=0.000;HRun=1;HaplotypeScore=69.6891;InbreedingCoeff=0.9992;MQ=88.27;MQ0=0;MQRankSum=-2.279;QD=38.93;ReadPosRankSum=1.076;VQSLOD=5.3744;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:96.28:0,96,1481	1/1:0,8:8:24.08:336,24,0	0/0:20,0:20:60.16:0,60,913	0/0:28,0:28:73.77:0,74,1055	0/0:24,0:24:72.22:0,72,1090	0/0:16,0:16:48.16:0,48,767	0/0:20,0:20:60.20:0,60,959	1/1:0,31:31:93.31:1299,93,0	1/1:0,16:16:45.15:629,45,0	1/1:0,19:19:57.19:797,57,0	1/1:0,18:18:54.18:755,54,0	0/0:40,0:40:99:0,120,1864	0/0:34,0:34:93.28:0,93,1456	0/0:24,0:24:72.25:0,72,1151	1/1:0,34:34:90.24:1258,90,0	0/0:43,0:43:99:0,129,2013	1/1:0,27:27:72.24:1007,72,0	0/0:28,0:28:84.27:0,84,1318	1/1:0,16:16:48.14:652,48,0	1/1:0,24:24:69.11:900,69,0	1/1:0,37:37:96.32:1342,96,0	0/0:32,0:32:96.28:0,96,1464	0/0:25,0:25:75.20:0,75,1126	0/0:7,0:7:21.07:0,21,336	1/1:0,24:24:66.22:923,66,0	1/1:0,21:21:63.20:865,63,0	1/1:0,34:34:89.82:1258,90,0	1/1:0,16:16:45.15:629,45,0
chr10	57916606	.	AT	A	12062.92	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=18.227;DP=741;FS=3.971;HRun=9;HaplotypeScore=107.3093;InbreedingCoeff=0.9963;MQ=72.30;MQ0=0;MQRankSum=-0.229;QD=24.32;ReadPosRankSum=1.162;VQSLOD=4.7027;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,23:24:69.04:631,69,0	1/1:2,9:11:27:247,27,0	0/0:13,0:13:24.05:0,24,256	0/0:15,0:15:16.76:0,17,227	1/1:1,28:29:81.04:741,81,0	0/0:32,0:32:96.26:0,96,1090	0/0:22,0:22:57.17:0,57,658	1/1:6,24:30:71.99:647,72,0	1/1:2,25:27:75.03:686,75,0	1/1:1,38:39:99:1039,114,0	1/1:1,25:26:75.04:686,75,0	0/0:45,0:45:99:0,120,1362	0/0:25,0:25:63.19:0,63,727	0/0:32,0:32:84.25:0,84,969	1/1:4,28:32:81.04:741,81,0	1/1:3,50:53:99:1290,141,0	1/1:6,12:18:36.01:329,36,0	1/1:1,6:7:17.96:157,18,0	1/1:3,16:19:41.99:375,42,0	1/1:1,33:34:90.03:823,90,0	1/1:0,15:15:45.02:412,45,0	0/0:27,0:27:72.21:0,72,831	0/0:25,0:25:63.19:0,63,727	0/0:9,0:9:24.07:0,24,277	1/1:0,32:32:84.05:769,84,0	1/1:1,41:42:99:1115,123,0	1/1:2,41:43:99:1071,117,0	1/1:0,15:15:33.02:302,33,0
chr10	57918626	.	AAC	A	945.22	PASS	AB=0.955;AC=34;AF=0.773;AN=44;BaseQRankSum=4.346;DP=577;FS=2.218;HRun=0;HaplotypeScore=142.7295;InbreedingCoeff=-0.1558;MQ=58.95;MQ0=21;MQRankSum=-3.320;QD=2.20;ReadPosRankSum=2.471;VQSLOD=2.7983;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	1/1:2,0:2:2.84:14,3,0	./.	./.	1/1:16,0:16:7.37:48,7,0	0/1:19,1:17:21.81:22,0,24	0/1:29,2:31:37.12:51,0,37	./.	0/1:16,0:16:17.05:17,0,21	1/1:20,0:20:12.92:60,13,0	1/1:17,0:17:11.32:55,11,0	0/1:20,4:24:34.79:55,0,35	0/1:19,0:20:8.20:8,0,63	0/1:19,0:18:16.34:16,0,122	1/1:24,0:23:2.84:14,3,0	1/1:23,0:35:19.76:98,20,0	1/1:22,0:22:4.56:17,5,0	0/0:17,0:15:1.69:0,2,9	./.	1/1:19,0:17:11.36:56,11,0	1/1:18,0:16:2.77:14,3,0	0/1:22,3:25:16.96:138,0,17	0/1:18,0:17:2.89:43,0,3	1/1:25,9:34:17.87:173,18,0	./.	1/1:26,0:26:11.32:55,11,0	1/1:15,0:15:22.44:107,22,0	1/1:6,0:6:2.84:14,3,0
chr10	57918652	.	CACACACACACACACACACACACACA	C	6394.93	PASS	AB=0.817;AC=16;AF=0.286;AN=56;BaseQRankSum=5.815;DP=496;FS=7.007;HRun=0;HaplotypeScore=289.0554;InbreedingCoeff=-0.1297;MQ=44.95;MQ0=45;MQRankSum=-6.931;QD=38.99;ReadPosRankSum=2.104;VQSLOD=2.7205;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:14:12.04:0,12,666	1/1:1,0:2:4.83:188,5,0	0/0:15,0:2:6.02:0,6,103	0/0:23,0:2:3.01:0,3,38	0/0:17,0:17:25.60:0,26,1554	0/0:21,0:18:42.85:0,43,3251	0/0:34,0:34:76.80:0,77,3683	1/1:9,0:7:1.69:78,2,0	0/1:7,2:9:99:480,0,322	0/1:5,4:8:7:994,0,7	0/1:6,5:10:99:853,0,100	0/0:19,0:19:42.13:0,42,2907	0/0:22,0:21:38.39:0,38,2926	0/0:23,0:21:57.20:0,57,4388	0/1:19,0:18:99:135,0,374	0/0:39,0:37:75.68:0,76,3942	0/1:15,0:16:99:131,0,254	0/0:17,0:14:18.02:0,18,1140	0/1:10,0:9:49.78:50,0,138	0/1:5,3:6:10.65:744,0,11	0/1:16,0:13:21.43:170,0,21	0/0:29,0:29:66.83:0,67,4572	0/0:21,0:19:21.55:0,22,1979	0/0:34,0:33:54.19:0,54,3742	0/1:12,0:10:99:107,0,178	0/1:10,2:13:99:813,0,121	0/1:12,7:18:99:1464,0,210	0/1:2,1:3:40.07:190,0,40
chr10	57918658	.	CA	C	178.91	PASS	AB=0.920;AC=9;AF=0.173;AN=52;BaseQRankSum=9.172;DP=544;FS=2.271;HRun=1;HaplotypeScore=162.6580;InbreedingCoeff=-0.1897;MQ=42.06;MQ0=56;MQRankSum=-6.675;QD=1.69;ReadPosRankSum=6.542;VQSLOD=-0.7495;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:15:12.03:0,12,153	0/1:1,1:2:21.49:21,0,30	./.	./.	0/0:18,0:18:26.59:0,27,254	0/0:21,0:18:43.38:0,43,527	0/0:34,0:34:69.66:0,70,808	0/0:14,0:12:30.02:0,30,340	0/1:12,0:11:2.02:2,0,262	0/1:7,1:6:21.01:78,0,21	0/1:11,0:10:32.45:32,0,196	0/0:18,0:18:34.54:0,35,404	0/0:24,0:23:45.25:0,45,558	0/0:24,0:22:56.55:0,57,727	0/0:19,1:18:41.93:0,42,608	0/0:41,0:39:67.71:0,68,777	0/0:18,1:19:17.35:0,17,484	0/0:17,0:14:15.01:0,15,159	0/0:13,0:12:31.31:0,31,360	0/1:14,1:11:45.03:45,0,128	0/1:17,1:14:7.85:8,0,169	0/0:27,1:28:55.32:0,55,632	0/0:20,0:18:22.26:0,22,249	0/0:35,0:34:51.78:0,52,533	0/0:11,0:9:24.08:0,24,303	0/1:14,2:15:40.28:40,0,334	0/1:19,1:19:75.44:75,0,357	0/1:4,0:4:5.72:6,0,101
chr10	57918671	.	AC	A	71.13	PASS	AB=0.929;AC=8;AF=0.143;AN=56;BaseQRankSum=8.984;DP=628;FS=4.338;HRun=1;HaplotypeScore=179.4594;InbreedingCoeff=-0.1656;MQ=43.63;MQ0=61;MQRankSum=-5.127;QD=0.61;ReadPosRankSum=2.953;VQSLOD=-0.6257;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:10:8.52:0,9,43	0/1:2,1:3:18.08:18,0,60	0/0:52,0:8:5.99:0,6,108	0/0:62,0:14:9.43:0,9,313	0/0:17,1:18:17.22:0,17,114	0/0:20,0:18:39.22:0,39,484	0/0:31,0:31:74.23:0,74,829	0/0:20,0:18:51.16:0,51,637	0/0:15,0:14:8.57:0,9,351	0/1:9,1:8:61.34:61,0,91	0/1:15,0:14:14.69:15,0,337	0/0:25,0:25:52.39:0,52,625	0/0:23,0:22:47.78:0,48,582	0/0:20,0:19:53.51:0,54,673	0/0:22,1:20:35.12:0,35,656	0/0:41,0:39:64.24:0,64,752	0/0:22,1:23:48.11:0,48,578	0/0:15,0:13:18.02:0,18,193	0/0:15,0:13:17.10:0,17,430	0/1:17,1:15:30.76:31,0,224	0/1:19,1:16:7.11:7,0,151	0/0:29,0:29:57.07:0,57,637	0/0:19,0:17:18.57:0,19,208	0/0:31,0:30:51.77:0,52,519	0/0:15,0:13:33.11:0,33,414	0/1:19,2:20:14.22:14,0,505	0/1:23,1:23:49.70:50,0,458	0/1:5,0:5:1.54:2,0,136
chr10	57918683	.	CA	C	7001.15	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=12.232;DP=680;FS=0.000;HRun=5;HaplotypeScore=176.1671;InbreedingCoeff=0.9362;MQ=48.92;MQ0=59;MQRankSum=-9.450;QD=23.73;ReadPosRankSum=2.551;VQSLOD=2.7858;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:12:1.04:11,1,0	1/1:1,5:6:15.04:170,15,0	0/0:72,0:17:32.94:0,33,436	0/0:93,0:25:44.03:0,44,697	1/1:18,0:18:3.32:13,3,0	0/0:11,0:9:24.06:0,24,300	0/0:33,0:33:87.04:0,87,1088	1/1:2,22:23:63.18:710,63,0	1/1:1,12:14:42.12:472,42,0	1/1:3,11:16:28.78:475,29,0	1/1:1,12:17:45.31:528,45,0	0/0:21,0:21:51.17:0,51,688	0/0:22,0:21:48.97:0,49,645	0/0:15,0:14:39.12:0,39,513	1/1:3,20:20:57.12:644,57,0	0/0:39,0:38:86.64:0,87,1087	1/1:3,22:25:60.17:681,60,0	0/0:10,0:10:10.88:0,11,99	1/1:9,7:13:21.06:238,21,0	1/1:4,13:18:48.03:532,48,0	1/1:9,13:19:34.55:376,35,0	0/0:24,0:24:59.19:0,59,744	0/0:16,0:14:26.04:0,26,319	0/0:27,0:26:54.18:0,54,720	1/1:2,16:16:39.11:434,39,0	1/1:3,20:24:66.12:746,66,0	1/1:2,17:25:71.71:805,72,0	1/1:0,4:5:15.04:169,15,0
chr10	57918688	.	AC	A	2652.82	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=15.927;DP=720;FS=1.884;HRun=1;HaplotypeScore=194.2333;InbreedingCoeff=0.5770;MQ=49.19;MQ0=57;MQRankSum=-9.749;QD=8.09;ReadPosRankSum=4.181;VQSLOD=1.2812;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,9:14:26.49:195,26,0	1/1:5,0:5:13.01:54,13,0	0/0:78,1:20:18.41:0,18,444	0/0:108,0:30:64.43:0,64,828	1/1:10,9:19:27.81:261,28,0	0/0:11,0:10:26.64:0,27,364	0/0:34,0:34:87.76:0,88,1193	1/1:26,0:25:12.36:224,12,0	1/1:16,0:15:16.20:169,16,0	1/1:20,0:18:1.77:115,2,0	1/1:17,1:17:41.51:215,42,0	0/0:20,0:20:50.85:0,51,665	0/0:21,0:21:37.46:0,37,638	0/0:16,0:16:48.10:0,48,617	0/1:27,0:26:63.69:198,0,64	0/0:40,0:39:86:0,86,1211	1/1:25,0:25:35.07:252,35,0	1/1:15,1:15:2.77:122,3,0	0/1:16,0:13:46.81:47,0,93	0/1:25,0:23:35.66:159,0,36	0/1:19,0:17:24.11:114,0,24	0/0:24,0:24:37.04:0,37,701	0/0:12,0:11:26.81:0,27,336	0/0:26,0:25:57.10:0,57,757	0/1:21,0:19:19.42:137,0,19	1/1:24,0:23:39.59:234,40,0	1/1:28,0:27:32.50:308,32,0	1/1:5,0:5:13.53:59,14,0
chr10	57918697	.	AAC	A	595.80	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=1.136;DP=739;FS=0.000;HRun=0;HaplotypeScore=211.0354;InbreedingCoeff=0.9851;MQ=52.00;MQ0=32;MQRankSum=-2.598;QD=10.83;ReadPosRankSum=-5.274;VQSLOD=2.1680;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,8:19:39.58:315,40,0	0/0:5,0:5:14.92:0,15,232	0/0:83,0:23:22.43:0,22,679	0/0:115,1:35:69.38:0,69,1094	1/1:17,4:21:20.40:289,20,0	0/0:11,0:10:30.09:0,30,504	0/0:31,0:32:90.29:0,90,1579	0/0:33,0:33:86.71:0,87,1287	0/0:15,0:15:43.69:0,44,710	0/0:20,0:19:53.17:0,53,836	0/0:22,0:22:62.35:0,62,877	0/0:20,0:20:57.19:0,57,964	0/0:18,0:18:51.16:0,51,898	0/0:18,0:18:54.03:0,54,855	0/0:32,0:31:93.30:0,93,1573	0/0:40,0:40:99:0,103,1679	0/0:25,0:25:63.03:0,63,1052	1/1:14,0:14:16.63:132,17,0	0/0:19,0:15:38.80:0,39,689	0/0:22,0:22:64.28:0,64,999	0/0:18,0:18:28.36:0,28,738	0/0:16,0:16:48.15:0,48,833	0/0:9,0:9:27.09:0,27,447	0/0:28,0:27:60.08:0,60,928	0/0:19,0:19:51.16:0,51,876	0/0:27,0:27:78.02:0,78,1282	0/0:27,0:27:78.40:0,78,1177	0/0:8,0:8:20.78:0,21,285
chr10	57918698	.	AC	A	584.18	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=1.464;DP=742;FS=0.000;HRun=1;HaplotypeScore=203.3075;InbreedingCoeff=0.9869;MQ=52.34;MQ0=32;MQRankSum=-2.427;QD=11.68;ReadPosRankSum=-5.593;VQSLOD=-0.2162;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:19:41.26:303,41,0	0/0:5,0:5:14.88:0,15,189	0/0:80,5:23:25.96:0,26,534	0/0:115,1:36:60.80:0,61,831	1/1:16,3:19:28.14:296,28,0	0/0:11,0:10:30.08:0,30,418	0/0:32,0:32:90.22:0,90,1265	0/0:36,0:36:92.56:0,93,1141	0/0:15,0:15:43.69:0,44,580	0/0:21,0:20:53.19:0,53,716	0/0:22,0:22:62.22:0,62,729	0/0:20,0:20:57.16:0,57,794	0/0:18,0:18:51.15:0,51,719	0/0:18,0:18:53.96:0,54,706	0/0:32,0:31:93.30:0,93,1317	0/0:40,0:40:99:0,104,1413	0/0:25,0:25:62.86:0,63,853	1/1:11,1:12:16.49:126,16,0	0/0:18,0:14:39.09:0,39,543	0/0:23,0:23:67.28:0,67,848	0/0:18,0:18:28.43:0,28,617	0/0:16,0:16:48.15:0,48,680	0/0:9,0:9:27.07:0,27,362	0/0:28,0:27:60.08:0,60,790	0/0:19,0:19:51.15:0,51,707	0/0:28,0:28:81.03:0,81,1063	0/0:29,0:29:84.37:0,84,1011	0/0:8,0:8:20.76:0,21,220
chr10	57919041	.	AGCACCCGTACTCCTCC	A	26074.36	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=19.356;DP=682;FS=14.572;HRun=0;HaplotypeScore=310.3991;InbreedingCoeff=0.9906;MQ=85.45;MQ0=0;MQRankSum=-17.059;QD=91.17;ReadPosRankSum=2.333;VQSLOD=2.9583;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,150,10714	1/1:2,11:13:24.08:1126,24,0	0/0:31,0:31:90.31:0,90,5811	0/0:22,0:22:53.75:0,54,3447	0/0:24,0:24:69.24:0,69,5223	0/0:23,0:23:69.24:0,69,4798	0/0:24,0:24:69.21:0,69,4736	1/1:8,14:22:42.14:1728,42,0	1/1:2,22:24:57.20:2675,57,0	1/1:1,23:24:69.16:2707,69,0	1/1:1,8:9:24.04:992,24,0	0/0:34,0:34:99:0,99,7561	0/0:31,0:31:93.31:0,93,6558	0/0:37,0:37:99:0,102,7874	1/1:8,33:41:96.33:4505,96,0	0/0:42,0:42:99:0,126,8784	1/1:9,8:17:12.04:563,12,0	0/0:14,0:14:42.14:0,42,3293	1/1:5,12:17:36.11:1574,36,0	1/1:5,18:23:51.18:2300,51,0	1/1:5,12:17:27.09:1071,27,0	0/0:20,0:20:54.18:0,54,4050	0/0:9,0:9:24.08:0,24,1576	0/0:32,0:32:93.31:0,93,6969	1/1:3,19:22:45.15:2112,45,0	1/1:6,18:24:54.17:2187,54,0	1/1:10,18:28:42.14:1971,42,0	1/1:0,5:5:12.04:563,12,0
chr10	57921520	.	G	GC	13761.92	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-14.534;DP=666;FS=6.244;HRun=4;HaplotypeScore=66.2225;InbreedingCoeff=0.9812;MQ=83.63;MQ0=0;MQRankSum=-3.423;QD=35.29;ReadPosRankSum=1.718;VQSLOD=5.4364;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,37:43:99:1435,105,0	1/1:1,8:9:15.05:205,15,0	0/0:25,0:25:40.74:0,41,665	0/0:20,0:19:47.22:0,47,482	1/1:0,6:6:18.06:246,18,0	0/0:16,0:16:45.10:0,45,490	0/0:41,0:41:99:0,114,1272	1/1:2,12:14:33.11:450,33,0	1/1:0,22:22:60.15:798,60,0	1/1:2,19:21:57.19:778,57,0	1/1:0,8:8:18.06:246,18,0	0/0:36,0:36:99:0,108,1207	0/0:35,0:35:96.23:0,96,1067	0/0:30,0:30:84.21:0,84,933	1/1:2,23:25:60.20:820,60,0	0/0:19,0:19:48.12:0,48,537	1/1:4,46:50:99:1764,129,0	1/1:1,39:40:99:1477,108,0	1/1:1,22:22:66.15:835,66,0	1/1:0,4:4:12.04:164,12,0	1/1:2,60:62:99:2379,175,0	0/0:8,0:8:24.05:0,24,263	0/0:6,0:6:18.05:0,18,204	0/0:40,0:40:99:0,111,1237	1/1:0,14:14:30.10:409,30,0	1/1:0,27:27:81.19:1064,81,0	1/1:1,14:15:42.14:567,42,0	1/1:2,5:7:9.03:122,9,0
chr10	57922047	.	TG	T	327.74	PASS	AB=0.882;AC=3;AF=0.054;AN=56;BaseQRankSum=3.830;DP=523;FS=0.000;HRun=10;HaplotypeScore=60.1087;InbreedingCoeff=0.5026;MQ=78.15;MQ0=0;MQRankSum=0.425;QD=9.64;ReadPosRankSum=2.289;VQSLOD=2.1882;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,1:33:55.09:0,55,798	0/0:6,0:6:15.03:0,15,158	0/0:14,1:15:10.89:0,11,139	0/0:17,0:16:17.21:0,17,176	0/0:13,0:13:12.03:0,12,132	0/0:15,0:15:24:0,24,250	0/0:28,0:28:57.11:0,57,609	0/0:23,1:24:4:0,4,253	0/0:10,0:10:24.05:0,24,258	0/0:16,0:17:11.73:0,12,125	0/0:18,0:18:26.95:0,27,269	0/0:22,1:23:31.02:0,31,515	0/0:23,0:23:48.03:0,48,482	0/0:15,0:15:22.37:0,22,228	0/0:16,0:16:24.05:0,24,252	1/1:1,18:19:47.99:417,48,0	0/0:27,1:28:40.12:0,40,664	0/0:25,0:25:57.10:0,57,596	0/1:12,2:15:15.40:15,0,296	0/0:23,0:23:17.93:0,18,164	0/0:19,1:20:16.11:0,16,398	0/0:13,0:13:21.04:0,21,223	0/0:14,0:14:30.06:0,30,320	0/0:26,1:27:46.08:0,46,699	0/0:23,0:23:35.10:0,35,373	0/0:17,0:17:18.05:0,18,199	0/0:22,1:23:14.60:0,15,363	0/0:3,0:3:9.02:0,9,100
chr10	57922695	.	C	CAA	4971.38	PASS	AB=0.842;AC=27;AF=0.482;AN=56;BaseQRankSum=-3.600;DP=573;FS=0.000;HRun=12;HaplotypeScore=81.5097;InbreedingCoeff=0.9036;MQ=53.33;MQ0=17;MQRankSum=-2.281;QD=18.55;ReadPosRankSum=-2.218;VQSLOD=3.6062;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:38:68.70:0,69,685	1/1:2,4:9:11.53:135,12,0	0/0:9,0:7:20.77:0,21,163	0/0:9,0:4:2.96:0,3,26	0/0:28,0:28:29.22:0,29,308	0/0:21,0:24:47.91:0,48,400	0/0:22,0:21:23.71:0,24,221	1/1:9,13:22:38.49:513,38,0	1/1:9,5:14:28.89:265,29,0	1/1:11,9:22:6.86:223,7,0	1/1:9,8:19:23.51:276,24,0	0/0:19,0:21:21.27:0,21,241	0/0:13,0:11:17.89:0,18,166	0/0:21,0:21:38.41:0,38,329	1/1:6,13:20:10.68:422,11,0	0/0:28,0:26:59.81:0,60,555	1/1:5,19:23:32.54:406,33,0	0/0:18,0:19:23.34:0,23,206	1/1:5,9:14:30.07:386,30,0	1/1:9,9:22:24.69:420,25,0	1/1:2,7:11:21.07:294,21,0	0/0:21,0:23:50.66:0,51,456	0/0:22,0:23:35.74:0,36,375	0/0:20,0:20:29.71:0,30,262	1/1:5,21:26:47.48:557,47,0	0/1:13,2:15:1.22:198,0,1	1/1:7,20:26:56.67:742,57,0	1/1:5,4:8:11.53:135,12,0
chr10	57924697	.	T	TTTG	17282.85	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-10.227;DP=825;FS=5.411;HRun=0;HaplotypeScore=119.4790;InbreedingCoeff=0.9876;MQ=65.94;MQ0=0;MQRankSum=-0.301;QD=33.56;ReadPosRankSum=0.928;VQSLOD=4.9294;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:41:48.35:563,48,0	1/1:1,7:8:18.06:352,18,0	0/0:26,0:23:36.07:0,36,450	0/0:28,0:23:9.94:0,10,325	1/1:11,1:26:45.03:554,45,0	0/0:28,0:28:66.22:0,66,927	0/0:21,0:21:42.14:0,42,589	1/1:23,10:36:45.13:807,45,0	1/1:11,21:32:57.20:1143,57,0	1/1:14,26:41:84.29:1653,84,0	1/1:5,21:26:63.21:1207,63,0	0/0:30,0:30:75.25:0,75,1052	0/0:41,0:41:99:0,99,1338	0/0:39,0:39:81.26:0,81,1120	1/1:12,34:48:58.06:1710,58,0	0/0:35,0:35:84.28:0,84,1181	1/1:8,20:29:66.23:1300,66,0	1/1:11,0:20:15.52:195,16,0	1/1:13,21:36:72.21:1275,72,0	1/1:7,15:22:42.14:768,42,0	1/1:8,23:31:54.19:1083,54,0	0/0:10,0:10:15.05:0,15,211	0/0:19,0:19:36.12:0,36,504	0/0:33,0:33:90.25:0,90,1225	1/1:5,13:19:36.12:722,36,0	1/1:8,28:37:87.28:1676,87,0	1/1:5,29:35:69.08:1383,69,0	1/1:9,19:28:45.15:890,45,0
chr10	57925303	.	C	CACTGTTA	29969.61	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-5.790;DP=613;FS=4.440;HRun=0;HaplotypeScore=146.3250;InbreedingCoeff=0.9953;MQ=77.55;MQ0=14;MQRankSum=-15.912;QD=84.90;ReadPosRankSum=-1.798;VQSLOD=5.3301;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:12,15:24:66.20:2290,66,0	1/1:3,8:9:24.07:801,24,0	0/0:39,0:36:91.74:0,92,2035	0/0:65,0:55:99:0,107,2446	1/1:13,15:27:69.18:2356,69,0	0/0:14,0:14:36.11:0,36,914	0/0:17,0:17:45.12:0,45,1080	1/1:16,22:26:63.12:2201,63,0	1/1:6,8:11:33.11:1347,33,0	1/1:13,13:22:57.19:2106,57,0	1/1:10,14:23:66.14:2032,66,0	0/0:21,0:21:63.22:0,63,1692	0/0:17,0:17:51.18:0,51,1375	0/0:20,0:20:57.20:0,57,1527	1/1:6,25:30:90.30:3500,90,0	0/0:25,0:25:75.26:0,75,2022	1/1:0,9:9:24.08:979,24,0	1/1:3,6:8:21.05:760,21,0	1/1:9,7:12:24.08:904,24,0	1/1:8,10:16:48.16:1650,48,0	1/1:8,5:9:14.61:611,15,0	0/0:17,0:17:51.15:0,51,1302	0/0:12,0:12:33.11:0,33,881	0/0:12,0:12:36.12:0,36,968	1/1:7,14:21:60.15:2185,60,0	1/1:6,15:21:57.19:2163,57,0	1/1:10,22:31:87.28:3271,87,0	1/1:1,6:7:21.07:813,21,0
chr10	57925358	.	GAA	G	8278.65	PASS	AB=1.000;AC=35;AF=0.625;AN=56;BaseQRankSum=7.210;DP=595;FS=3.180;HRun=13;HaplotypeScore=101.0804;InbreedingCoeff=0.9031;MQ=58.99;MQ0=3;MQRankSum=-5.259;QD=20.34;ReadPosRankSum=3.032;VQSLOD=4.5800;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,27:29:65.98:680,66,0	1/1:0,10:10:30.05:290,30,0	0/0:25,1:18:3.25:0,3,214	0/1:15,0:8:4.73:5,0,37	1/1:4,31:37:71.40:711,71,0	0/0:12,0:15:32.55:0,33,404	0/0:14,0:14:30.08:0,30,416	1/1:9,17:24:41.95:453,42,0	1/1:3,11:14:35.78:332,36,0	1/1:3,19:22:47.98:515,48,0	1/1:4,23:29:56.71:585,57,0	0/0:21,0:24:55.20:0,55,702	0/0:20,0:20:54.11:0,54,733	0/0:12,0:13:35.99:0,36,424	1/1:5,33:38:90.09:873,90,0	0/0:23,0:22:60.18:0,60,831	1/1:1,15:18:50.56:460,51,0	1/1:2,6:10:23.46:198,23,0	1/1:10,22:32:66.03:640,66,0	1/1:5,19:24:54:523,54,0	1/1:1,7:8:14.97:145,15,0	0/0:19,0:22:44.44:0,44,622	0/0:15,0:15:37.92:0,38,493	0/0:15,1:16:12.61:0,13,484	1/1:6,21:28:59.77:565,60,0	1/1:8,11:21:43.86:380,44,0	1/1:6,28:34:81:785,81,0	1/1:2,5:7:8.95:137,9,0
chr10	57926212	.	TTTTTG	T	9722.92	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=9.423;DP=629;FS=7.575;HRun=0;HaplotypeScore=143.9685;InbreedingCoeff=0.9910;MQ=62.77;MQ0=3;MQRankSum=-6.779;QD=26.93;ReadPosRankSum=-0.295;VQSLOD=4.0256;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:21:24.22:227,24,0	1/1:6,5:11:27.09:478,27,0	0/0:21,0:20:18.15:0,18,319	0/0:28,0:17:11.87:0,12,142	1/1:15,0:26:24.36:238,24,0	0/0:26,0:26:60.20:0,60,1481	0/0:24,0:24:51.13:0,51,1203	1/1:30,5:35:36.65:580,37,0	1/1:12,8:20:30.10:540,30,0	1/1:13,5:18:27.09:486,27,0	1/1:11,7:18:30.09:509,30,0	0/0:25,0:25:45.15:0,45,1101	0/0:15,0:15:36.12:0,36,947	0/0:23,0:23:57.19:0,57,1428	1/1:17,11:28:54.18:945,54,0	0/0:31,0:31:66.23:0,66,1849	1/1:13,6:19:27.06:430,27,0	1/1:12,0:13:16.50:172,16,0	1/1:10,5:13:24.08:439,24,0	1/1:9,13:22:57.10:961,57,0	1/1:21,1:22:29.50:366,29,0	0/0:22,0:22:54.18:0,54,1241	0/0:25,0:25:54.19:0,54,1383	0/0:28,0:28:63.20:0,63,1547	1/1:9,11:20:45.15:804,45,0	1/1:24,10:34:72.23:1228,72,0	1/1:18,10:27:54.17:923,54,0	1/1:5,5:10:27.07:397,27,0
chr10	57926229	.	T	TTTG	1190.73	PASS	AB=0.825;AC=3;AF=0.054;AN=56;BaseQRankSum=5.482;DP=655;FS=9.280;HRun=0;HaplotypeScore=163.0941;InbreedingCoeff=-0.0587;MQ=59.30;MQ0=7;MQRankSum=-4.003;QD=19.52;ReadPosRankSum=-0.778;VQSLOD=2.4107;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:20,5:25:99:476,0,211	0/0:11,0:11:30.91:0,31,322	0/0:23,0:18:26.88:0,27,509	0/0:33,0:16:10.20:0,10,305	0/1:21,1:22:74.64:576,0,75	0/0:26,0:26:78.25:0,78,1204	0/0:25,0:25:69.24:0,69,1096	0/0:35,0:34:86.14:0,86,944	0/0:20,0:20:48:0,48,495	0/0:17,0:17:40.61:0,41,434	0/0:19,0:19:45.91:0,46,473	0/0:19,0:19:57.19:0,57,887	0/0:17,0:17:48.15:0,48,727	0/0:25,0:25:72.23:0,72,1126	0/0:26,0:26:74.19:0,74,754	0/0:35,0:35:96.30:0,96,1482	0/0:20,0:20:45.90:0,46,460	0/1:8,5:12:99:238,0,108	0/0:21,0:17:44.86:0,45,399	0/0:31,0:31:84.99:0,85,934	0/0:23,0:23:19.10:0,19,496	0/0:25,0:25:72.23:0,72,1124	0/0:27,0:27:75.22:0,75,1131	0/0:27,0:27:81.23:0,81,1252	0/0:26,0:26:66.07:0,66,702	0/0:29,0:29:82.67:0,83,800	0/0:23,0:22:62.09:0,62,544	0/0:9,0:9:25.99:0,26,227
chr10	57926263	.	G	GT	9680.41	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=1.705;DP=627;FS=7.581;HRun=7;HaplotypeScore=96.6877;InbreedingCoeff=0.9569;MQ=57.21;MQ0=3;MQRankSum=-2.378;QD=25.95;ReadPosRankSum=0.596;VQSLOD=4.8639;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,0:24:54.58:282,55,0	1/1:2,13:15:36.08:419,36,0	0/0:13,0:8:7.02:0,7,128	0/0:16,0:6:1.98:0,2,27	1/1:2,2:22:47.93:252,48,0	0/0:25,0:25:72.10:0,72,689	0/0:22,0:22:63.10:0,63,608	1/1:8,22:29:63.19:757,63,0	1/1:0,22:22:60.18:724,60,0	1/1:0,12:12:36.11:435,36,0	1/1:1,20:21:57.17:688,57,0	0/0:20,0:20:60.08:0,60,574	0/0:23,0:23:60.08:0,60,579	0/0:19,0:19:51.06:0,51,486	1/1:1,31:32:69.14:799,69,0	0/0:38,0:38:96.15:0,96,927	1/1:4,16:21:51.11:590,51,0	1/1:1,0:17:43.06:219,43,0	1/1:2,19:21:54.12:634,54,0	1/1:3,30:33:87.27:1047,87,0	1/1:3,11:14:30.07:362,30,0	0/0:20,0:20:54.07:0,54,516	0/0:29,0:29:81.13:0,81,782	0/0:28,0:28:72.11:0,72,695	1/1:4,21:26:60.05:703,60,0	1/1:5,23:28:66.20:796,66,0	1/1:4,24:28:63.19:755,63,0	1/1:0,6:6:18.06:217,18,0
chr10	57928841	.	GTACTCATTT	G	21123.42	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=20.079;DP=735;FS=4.794;HRun=0;HaplotypeScore=216.5143;InbreedingCoeff=0.9339;MQ=78.17;MQ0=0;MQRankSum=-17.444;QD=64.60;ReadPosRankSum=1.383;VQSLOD=4.5902;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,120,5466	1/1:2,8:10:24.08:727,24,0	0/0:23,0:23:43.62:0,44,2337	0/1:20,0:20:1.51:2,0,1169	0/0:33,0:33:96.31:0,96,4085	0/0:27,0:27:72.25:0,72,3266	0/0:31,0:31:90.31:0,90,3953	1/1:5,15:20:45.10:976,45,0	1/1:4,23:27:60.21:1816,60,0	1/1:6,31:37:93.32:2694,93,0	1/1:2,19:21:54.18:1524,54,0	0/0:36,0:36:99:0,105,4977	0/0:45,0:45:99:0,132,6025	0/0:21,0:21:60.21:0,60,2845	1/1:2,30:32:72.25:2174,72,0	0/0:37,0:37:99:0,108,5039	1/1:0,15:15:36.12:1035,36,0	0/0:13,0:13:36.12:0,36,1733	1/1:5,11:16:30.08:754,30,0	1/1:3,21:24:60.20:1750,60,0	1/1:2,2:4:3.01:91,3,0	0/0:35,0:35:99:0,102,4677	0/0:34,0:34:99:0,99,4413	0/0:33,0:33:84.29:0,84,3923	1/1:3,21:24:48.16:1450,48,0	1/1:1,28:29:84.29:2501,84,0	1/1:4,33:36:89.81:2723,90,0	1/1:1,10:11:30.10:908,30,0
chr10	57929729	.	C	CAAAACAAAAAAAA	16976.34	PASS	AB=1.000;AC=35;AF=0.625;AN=56;BaseQRankSum=6.142;DP=565;FS=6.382;HRun=0;HaplotypeScore=203.7908;InbreedingCoeff=0.7672;MQ=52.49;MQ0=8;MQRankSum=-9.564;QD=43.53;ReadPosRankSum=-5.372;VQSLOD=3.0057;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:31,0:31:21.07:933,21,0	1/1:8,0:8:21.03:633,21,0	0/1:31,0:13:7.26:7,0,138	0/0:40,0:13:13.63:0,14,176	1/1:33,0:33:44.67:1111,45,0	0/0:18,0:19:44.85:0,45,1171	0/0:9,0:10:23.94:0,24,687	1/1:36,0:33:77.38:1357,77,0	0/1:9,0:8:4.76:451,0,5	1/1:9,3:24:42.71:870,43,0	1/1:20,0:17:36.54:617,37,0	0/0:17,0:19:41.75:0,42,1234	0/0:16,0:16:45.14:0,45,1375	0/0:24,0:23:57.02:0,57,1712	1/1:12,1:13:33.05:689,33,0	0/1:15,0:15:22.49:22,0,155	1/1:16,0:16:32.13:664,32,0	1/1:15,0:15:6.02:302,6,0	1/1:26,0:24:60.03:1864,60,0	1/1:20,0:19:56.43:963,56,0	1/1:3,0:3:9.02:264,9,0	0/0:12,0:13:39.11:0,39,1112	0/0:10,0:10:30.07:0,30,874	0/0:21,0:21:63.14:0,63,1667	1/1:16,0:16:48.12:1118,48,0	1/1:31,0:29:77.40:2601,77,0	1/1:27,0:26:29.74:2188,30,0	1/1:2,3:16:9.03:322,9,0
chr10	57929730	.	A	AAAACAAACAAACAAAC	10204.67	PASS	AB=1.000;AC=20;AF=0.357;AN=56;BaseQRankSum=0.294;DP=559;FS=15.075;HRun=0;HaplotypeScore=250.7171;InbreedingCoeff=-0.0836;MQ=52.37;MQ0=6;MQRankSum=-6.688;QD=29.66;ReadPosRankSum=0.501;VQSLOD=2.4100;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:4,17:38:21.07:1443,21,0	0/1:8,0:8:33.65:379,0,34	0/0:29,0:13:21.91:0,22,368	0/0:41,0:13:18.89:0,19,425	1/1:3,16:36:50.89:1752,51,0	0/0:19,0:19:51.14:0,51,1714	0/0:10,0:10:27.08:0,27,1010	0/1:36,0:33:99:501,0,190	0/1:9,0:8:47.16:190,0,47	0/1:21,0:21:99:226,0,230	0/1:20,0:17:76.08:76,0,128	0/0:18,0:18:48.15:0,48,1675	0/0:16,0:16:45.15:0,45,1787	0/0:24,0:23:60.15:0,60,2251	0/1:14,0:14:79.95:223,0,80	0/0:13,0:13:17.95:0,18,445	0/1:15,0:15:66.25:330,0,66	1/1:1,0:19:6.02:421,6,0	0/1:25,0:23:99:940,0,150	0/1:20,0:19:29.92:382,0,30	0/1:3,0:3:7:136,0,7	0/0:13,0:13:39.13:0,39,1527	0/0:10,0:10:30.10:0,30,1169	0/0:22,0:21:63.21:0,63,2303	0/1:16,0:16:63.03:442,0,63	0/1:31,0:29:78.62:1425,0,79	0/1:27,0:26:99:1190,0,159	0/1:6,0:6:8.97:150,0,9
chr10	57929921	.	T	TA	1873.49	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-6.642;DP=552;FS=5.442;HRun=9;HaplotypeScore=58.7971;InbreedingCoeff=0.9637;MQ=63.03;MQ0=4;MQRankSum=-1.172;QD=22.30;ReadPosRankSum=0.252;VQSLOD=4.4013;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,28:36:57.69:869,58,0	0/0:11,0:11:20.99:0,21,182	0/0:20,0:12:19:0,19,158	0/0:14,0:8:11.93:0,12,95	1/1:5,23:27:41.04:583,41,0	0/0:22,0:21:53.97:0,54,467	0/0:19,0:19:47.95:0,48,412	0/0:25,0:24:44.96:0,45,388	0/0:19,0:19:50.97:0,51,440	0/0:18,0:18:53.97:0,54,465	0/0:8,0:7:20.95:0,21,175	0/0:22,0:22:62.99:0,63,547	0/0:14,0:14:38.99:0,39,338	0/0:21,0:20:53.98:0,54,469	0/0:20,0:21:53.02:0,53,449	0/0:21,0:21:30.93:0,31,443	0/0:40,0:40:88.22:0,88,832	1/1:2,18:20:51.14:564,51,0	0/0:22,0:21:38.86:0,39,332	0/0:12,0:12:13.29:0,13,258	0/0:17,0:17:38.18:0,38,319	0/0:7,0:7:11.99:0,12,104	0/0:10,0:10:23.99:0,24,208	0/0:26,0:26:71.96:0,72,620	0/0:10,0:10:26.99:0,27,233	0/0:28,0:28:74.98:0,75,650	0/0:24,0:24:65.96:0,66,570	0/0:17,0:17:44.99:0,45,391
chr10	57930028	.	C	CA	1848.44	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-8.901;DP=509;FS=4.734;HRun=9;HaplotypeScore=60.5348;InbreedingCoeff=0.8687;MQ=69.66;MQ0=0;MQRankSum=0.731;QD=19.06;ReadPosRankSum=1.432;VQSLOD=4.0397;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,40:48:99:1095,99,0	0/0:9,0:8:17.68:0,18,155	0/0:27,0:17:6.74:0,7,191	0/0:32,0:17:8.60:0,9,129	1/1:6,24:30:36.10:398,36,0	0/0:11,0:11:29.98:0,30,256	0/0:20,0:20:56.99:0,57,495	0/0:25,0:25:59.95:0,60,521	0/0:10,0:10:26.99:0,27,234	0/0:14,0:15:32.02:0,32,266	0/0:12,0:11:20.98:0,21,182	0/0:20,0:20:56.97:0,57,491	0/0:13,0:13:26.96:0,27,230	0/0:7,0:7:5.99:0,6,52	0/0:14,0:14:29.99:0,30,260	0/0:18,0:18:50.99:0,51,443	0/0:32,0:31:74.98:0,75,651	1/1:5,14:19:45.12:497,45,0	0/0:12,0:13:35.03:0,35,292	0/0:12,0:12:16.20:0,16,263	0/0:29,0:29:80.97:0,81,703	0/0:9,0:9:20.02:0,20,162	0/0:5,0:5:5.99:0,6,52	0/0:18,1:19:19.94:0,20,408	0/0:13,0:13:29.98:0,30,260	0/0:17,0:16:44.97:0,45,387	0/0:18,0:17:35.95:0,36,308	0/0:12,0:12:20.98:0,21,182
chr10	57930225	.	T	TA	3191.36	PASS	AB=0.815;AC=30;AF=0.556;AN=54;BaseQRankSum=0.510;DP=451;FS=2.767;HRun=15;HaplotypeScore=83.8743;InbreedingCoeff=0.5066;MQ=54.97;MQ0=13;MQRankSum=-2.125;QD=10.04;ReadPosRankSum=-0.592;VQSLOD=3.0143;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:26:54.81:319,55,0	0/1:6,2:8:3.19:75,0,3	0/0:33,0:8:11.28:0,11,62	0/0:29,0:5:4.73:0,5,23	1/1:18,3:29:64.54:381,65,0	0/0:10,0:10:20.38:0,20,122	0/0:8,0:8:8.63:0,9,54	0/1:13,3:16:6.36:150,0,6	1/1:5,1:6:0.03:61,0,0	1/1:15,11:25:19.14:359,19,0	0/1:12,4:16:27.44:149,0,27	0/0:8,0:7:11.33:0,11,63	0/0:16,0:15:26.28:0,26,160	0/0:9,0:9:13.97:0,14,88	1/1:4,7:13:32.65:254,33,0	1/1:7,1:20:31.15:157,31,0	0/1:18,1:18:7.41:122,0,7	1/1:14,1:20:30.80:181,31,0	0/1:8,1:10:17.01:66,0,17	1/1:5,3:8:17.84:135,18,0	1/1:6,1:7:5.99:50,6,0	./.	0/0:9,0:9:22.80:0,23,131	0/0:7,0:8:13.56:0,14,74	1/1:12,9:20:5.28:245,5,0	1/1:17,6:23:23.42:355,23,0	0/1:16,3:19:2.76:86,0,3	1/1:13,7:18:32.26:239,32,0
chr10	57930248	.	AAC	A	622.64	PASS	AB=0.969;AC=21;AF=0.389;AN=54;BaseQRankSum=2.811;DP=494;FS=22.004;HRun=0;HaplotypeScore=89.3218;InbreedingCoeff=-0.5564;MQ=53.03;MQ0=20;MQRankSum=0.310;QD=1.59;ReadPosRankSum=0.166;VQSLOD=-0.0206;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:29:72.88:85,0,73	0/1:8,0:7:32.72:33,0,40	0/1:32,0:6:0.88:1,0,69	0/0:32,0:6:7.37:0,7,65	0/1:28,2:28:63.06:63,0,128	0/0:18,0:16:8.01:0,8,289	0/0:9,0:10:17.41:0,17,215	0/1:25,2:24:56.91:90,0,57	0/1:9,0:9:19.53:20,0,34	0/1:28,0:27:48.79:49,0,171	0/1:18,0:18:2.16:2,0,133	0/0:8,0:7:6.49:0,6,47	0/1:18,0:17:11.48:11,0,216	0/0:14,0:13:16.95:0,17,150	0/1:19,0:19:2.36:2,0,85	0/0:20,0:19:41.82:0,42,362	0/1:21,0:17:31.58:93,0,32	0/1:23,0:21:42.17:42,0,93	0/1:10,0:8:44.99:45,0,48	0/1:10,0:10:39.70:56,0,40	0/1:6,1:6:7.77:11,0,8	./.	0/1:9,0:9:12.86:13,0,124	0/1:9,0:9:0.32:0,0,102	0/1:23,1:22:54.03:54,0,176	0/1:22,0:22:42.35:42,0,69	0/1:10,13:23:26.72:27,0,36	0/1:15,0:13:27.61:28,0,76
chr10	57930768	.	TA	T	11584.56	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=15.334;DP=692;FS=3.668;HRun=4;HaplotypeScore=67.5833;InbreedingCoeff=0.9996;MQ=82.94;MQ0=0;MQRankSum=-3.946;QD=32.54;ReadPosRankSum=2.164;VQSLOD=5.6754;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:57.15:0,57,776	1/1:0,8:8:24.07:288,24,0	0/0:18,0:18:41.52:0,42,567	0/0:23,0:23:65.94:0,66,838	0/0:37,0:37:99:0,108,1476	0/0:31,0:31:90.27:0,90,1225	0/0:13,0:13:39.10:0,39,512	1/1:4,33:37:99:1164,99,0	1/1:0,19:20:51.04:611,51,0	1/1:0,30:30:90.26:1066,90,0	1/1:1,29:30:84.26:1008,84,0	0/0:24,0:24:69.23:0,69,966	0/0:32,0:32:96.31:0,96,1324	0/0:25,0:25:66.21:0,66,908	1/1:2,38:40:99:1188,99,0	0/0:29,0:29:87.27:0,87,1188	1/1:1,16:17:48.15:576,48,0	0/0:15,0:15:42.14:0,42,583	1/1:1,15:16:45.14:540,45,0	1/1:0,38:38:99:1255,105,0	1/1:0,16:16:45.14:540,45,0	0/0:22,0:22:57.19:0,57,797	0/0:22,0:22:60.20:0,60,839	0/0:24,0:24:69.23:0,69,965	1/1:0,27:27:75.23:900,75,0	1/1:1,26:27:78.24:936,78,0	1/1:2,37:39:99:1188,99,0	1/1:1,10:11:27.08:324,27,0
chr10	57931678	.	C	CG	20828.05	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-12.000;DP=774;FS=2.240;HRun=0;HaplotypeScore=76.0768;InbreedingCoeff=0.9977;MQ=77.89;MQ0=0;MQRankSum=-2.359;QD=43.85;ReadPosRankSum=1.542;VQSLOD=5.4139;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,51:51:99:2301,144,0	1/1:0,16:16:45.14:719,45,0	0/0:17,0:17:48.12:0,48,620	0/0:17,0:17:48.03:0,48,640	1/1:0,27:27:75.26:1198,75,0	0/0:21,0:21:60.20:0,60,839	0/0:32,0:32:96.32:0,96,1341	1/1:0,30:29:87.22:1308,87,0	1/1:0,25:25:69.24:1102,69,0	1/1:0,34:34:99:1613,102,0	1/1:0,21:21:57.19:906,57,0	0/0:43,0:43:99:0,126,1762	0/0:35,0:35:99:0,102,1385	0/0:36,0:36:99:0,108,1505	1/1:3,31:34:81.28:1293,81,0	0/0:26,0:26:75.25:0,75,1047	1/1:0,31:31:90.31:1437,90,0	1/1:0,20:20:51.17:815,51,0	1/1:0,19:19:57.17:848,57,0	1/1:1,22:23:63.21:1004,63,0	1/1:0,49:49:99:2108,132,0	0/0:20,0:20:60.20:0,60,838	0/0:21,0:21:63.21:0,63,879	0/0:31,0:31:93.31:0,93,1300	1/1:0,22:22:63.21:1007,63,0	1/1:1,29:30:84.27:1303,84,0	1/1:1,36:36:99:1627,102,0	1/1:0,6:6:15.05:240,15,0
chr10	57932089	.	C	CT	5407.75	PASS	AB=0.566;AC=25;AF=0.446;AN=56;BaseQRankSum=-12.402;DP=598;FS=15.805;HRun=11;HaplotypeScore=73.8856;InbreedingCoeff=0.7651;MQ=68.98;MQ0=4;MQRankSum=1.201;QD=18.91;ReadPosRankSum=-1.371;VQSLOD=3.9532;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:26:40.51:0,41,119	1/1:1,7:8:15.03:152,15,0	0/0:31,0:19:18.07:0,18,165	0/0:23,0:12:5.12:0,5,62	0/0:2,0:26:42.29:0,42,124	0/0:32,0:34:82.21:0,82,619	0/0:16,0:17:46.76:0,47,347	1/1:10,23:33:42.95:557,43,0	1/1:0,14:14:36.07:365,36,0	1/1:6,22:28:63.12:634,63,0	1/1:2,19:21:24.73:408,25,0	0/0:18,1:21:21.43:0,21,329	0/0:15,0:14:32.82:0,33,250	0/0:18,1:19:43.88:0,44,405	0/1:4,10:14:19.42:186,0,19	0/0:19,0:20:49.66:0,50,375	1/1:4,21:25:16.66:532,17,0	0/0:2,0:19:30.55:0,31,90	1/1:6,13:20:19.98:388,20,0	1/1:5,13:18:12.80:301,13,0	1/1:2,8:10:15.03:151,15,0	0/0:22,0:22:56.76:0,57,439	0/0:18,0:18:35.79:0,36,274	0/0:19,1:20:17.32:0,17,313	0/1:3,15:18:7.40:296,0,7	1/1:5,24:29:72.08:714,72,0	0/1:8,25:33:30.69:418,0,31	1/1:2,12:14:30.06:305,30,0
chr10	57932114	.	ACT	A	788.57	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=0.668;DP=594;FS=3.030;HRun=0;HaplotypeScore=89.3672;InbreedingCoeff=0.8353;MQ=59.49;MQ0=4;MQRankSum=3.207;QD=31.54;ReadPosRankSum=0.840;VQSLOD=5.2000;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:69.20:0,69,1208	0/0:7,0:7:21.07:0,21,380	0/0:20,0:9:17.61:0,18,231	0/0:9,0:1:3.01:0,3,33	0/0:29,0:29:78.25:0,78,1416	0/0:34,0:34:99:0,99,1831	0/0:21,0:21:57.19:0,57,1042	0/0:32,0:32:78.21:0,78,1407	0/0:18,0:18:51.17:0,51,946	0/0:24,0:24:66.22:0,66,1174	0/0:24,0:24:69.23:0,69,1253	0/0:22,0:22:63.22:0,63,1154	0/0:21,0:20:57.15:0,57,1016	0/0:21,0:21:57.20:0,57,1067	0/0:16,0:16:42.14:0,42,778	1/1:1,24:25:59.83:883,60,0	0/0:23,0:23:69.24:0,69,1292	0/0:26,0:26:75.26:0,75,1387	0/0:15,0:14:42.14:0,42,757	0/0:24,0:24:60.21:0,60,1116	0/0:8,0:8:18.06:0,18,337	0/0:24,0:24:72.20:0,72,1232	0/0:18,0:18:51.16:0,51,922	0/0:17,0:17:51.15:0,51,915	0/0:20,0:20:48.13:0,48,828	0/0:28,0:28:75.22:0,75,1356	0/0:30,0:30:72.23:0,72,1339	0/0:13,0:13:30.10:0,30,562
chr10	57932961	.	T	TAAACAA	16578.62	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=0.282;DP=606;FS=19.018;HRun=0;HaplotypeScore=113.7185;InbreedingCoeff=0.9590;MQ=56.67;MQ0=3;MQRankSum=-12.334;QD=57.56;ReadPosRankSum=-1.803;VQSLOD=3.4582;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:63.21:0,63,1311	1/1:0,6:7:18.06:596,18,0	0/0:14,0:12:20.92:0,21,357	0/0:13,0:12:20.86:0,21,396	0/0:32,0:32:75.26:0,75,1632	0/0:27,0:27:78.24:0,78,1576	0/0:19,0:19:45.14:0,45,902	1/1:11,19:36:90.23:2092,90,0	1/1:3,19:22:39.13:1278,39,0	1/1:5,26:31:87.30:2436,87,0	1/1:2,26:29:63:1699,63,0	0/0:23,0:23:66.21:0,66,1413	0/0:24,0:24:66.23:0,66,1372	0/0:27,0:27:72.21:0,72,1483	1/1:5,23:29:63.22:1831,63,0	0/0:25,0:25:69.22:0,69,1464	1/1:9,15:24:31.66:904,32,0	0/0:16,0:16:36.10:0,36,746	1/1:5,13:19:42.09:1064,42,0	1/1:3,16:19:42.11:1221,42,0	1/1:2,4:7:3.01:58,3,0	0/0:23,0:23:63.22:0,63,1352	0/0:25,0:25:66.17:0,66,1307	0/0:23,0:23:59.23:0,59,1139	1/1:2,18:20:39.13:1230,39,0	1/1:4,12:17:39.12:1237,39,0	1/1:3,14:19:21.07:725,21,0	1/1:1,2:4:6.02:207,6,0
chr10	57933301	.	TACAC	T	929.02	PASS	AB=0.952;AC=29;AF=0.580;AN=50;BaseQRankSum=6.563;DP=571;FS=10.610;HRun=0;HaplotypeScore=120.0738;InbreedingCoeff=0.5861;MQ=58.44;MQ0=8;MQRankSum=-5.698;QD=3.35;ReadPosRankSum=0.326;VQSLOD=1.8213;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:22:3:47,3,0	1/1:5,1:6:3.48:47,3,0	./.	0/0:40,0:31:0.47:0,0,1	0/0:15,0:21:0.35:0,0,1	0/0:16,0:17:11.63:0,12,196	0/1:19,1:18:31.27:31,0,239	./.	1/1:14,6:20:6.02:93,6,0	1/1:21,1:20:2.21:28,2,0	1/1:10,6:16:2.50:46,3,0	0/0:21,0:21:33.89:0,34,639	0/0:20,0:20:15.52:0,16,315	0/0:17,0:16:18.06:0,18,358	1/1:20,6:26:19.95:281,20,0	1/1:11,0:17:9.01:84,9,0	1/1:17,0:16:0.47:1,0,0	0/0:16,0:16:18.06:0,18,337	1/1:22,2:23:6:69,6,0	./.	1/1:19,0:19:0.70:1,1,0	0/0:19,0:20:12.02:0,12,207	0/0:18,0:20:12.25:0,12,224	0/0:23,0:28:17.80:0,18,353	1/1:14,2:14:3.48:47,3,0	1/1:20,4:22:6.49:94,6,0	1/1:13,2:17:9.02:102,9,0	1/1:5,2:8:9.97:122,10,0
chr10	57933347	.	C	CAT	4765.72	PASS	AC=32;AF=0.593;AN=54;BaseQRankSum=-0.026;DP=625;FS=3.203;HRun=0;HaplotypeScore=101.3967;InbreedingCoeff=0.9928;MQ=62.11;MQ0=17;MQRankSum=-3.929;QD=15.94;ReadPosRankSum=-1.289;VQSLOD=4.6242;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:23:46.13:316,46,0	1/1:9,0:9:16.75:122,17,0	0/0:47,0:17:27.39:0,27,321	0/0:56,0:30:54.46:0,54,587	1/1:25,0:24:53.05:399,53,0	0/0:24,0:24:56.93:0,57,504	0/0:19,0:19:53.73:0,54,481	1/1:25,0:23:62.97:552,63,0	1/1:12,0:12:18.98:133,19,0	1/1:27,0:24:65.88:572,66,0	1/1:16,0:15:19.20:153,19,0	0/0:25,0:25:62.68:0,63,625	0/0:17,0:17:41.41:0,41,384	0/0:20,0:20:44.59:0,45,400	1/1:21,0:21:44.98:321,45,0	0/0:24,0:23:51.29:0,51,430	1/1:15,0:14:20.78:234,21,0	1/1:21,0:20:31.76:307,32,0	1/1:17,0:16:47.18:392,47,0	1/1:17,0:15:20.79:153,21,0	./.	0/0:14,0:14:23.75:0,24,236	0/0:22,0:22:38.74:0,39,377	0/0:31,0:31:65.87:0,66,628	1/1:11,0:11:16.40:115,16,0	1/1:20,0:19:45.51:360,46,0	1/1:29,0:27:62.05:464,62,0	1/1:11,0:11:26.09:173,26,0
chr10	57935133	.	A	AT	11887.07	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-16.187;DP=616;FS=4.949;HRun=8;HaplotypeScore=54.8691;InbreedingCoeff=0.9954;MQ=74.00;MQ0=0;MQRankSum=-0.934;QD=29.13;ReadPosRankSum=0.769;VQSLOD=5.0506;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,22:27:62.99:694,63,0	1/1:1,5:6:15.04:173,15,0	0/0:12,0:12:27.01:0,27,243	0/0:12,0:12:20.33:0,20,166	1/1:3,22:25:63.19:726,63,0	0/0:21,0:21:60.02:0,60,544	0/0:15,0:15:39.02:0,39,357	1/1:7,43:50:99:1379,123,0	1/1:1,21:22:60.18:692,60,0	1/1:2,22:24:69.20:794,69,0	1/1:0,28:28:75.22:866,75,0	0/0:27,0:27:75.03:0,75,686	0/0:18,0:18:54.03:0,54,494	0/0:20,0:20:57.01:0,57,514	1/1:4,25:29:69.21:796,69,0	0/0:21,0:21:60.02:0,60,544	1/1:1,21:22:57.17:658,57,0	1/1:3,20:23:51.15:589,51,0	1/1:2,19:21:35.69:642,36,0	1/1:0,25:25:69.21:796,69,0	1/1:1,8:9:18.05:208,18,0	0/0:24,0:24:63.02:0,63,572	0/0:22,0:22:57.02:0,57,522	0/0:16,0:16:48:0,48,432	1/1:2,19:21:48.14:554,48,0	1/1:4,31:35:93.28:1073,93,0	1/1:3,30:33:84.25:969,84,0	1/1:0,8:8:24.07:277,24,0
chr10	57936184	.	TACACAC	T	1326.06	PASS	AB=1.000;AC=10;AF=0.179;AN=56;BaseQRankSum=-1.232;DP=534;FS=0.819;HRun=0;HaplotypeScore=165.5171;InbreedingCoeff=0.6316;MQ=62.21;MQ0=6;MQRankSum=1.478;QD=12.39;ReadPosRankSum=1.686;VQSLOD=2.8893;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,6:16:0.07:272,0,0	0/1:18,0:17:11.02:11,0,346	0/0:29,0:20:45.05:0,45,974	0/0:29,0:17:27.52:0,28,617	1/1:17,5:23:30.02:536,30,0	0/0:19,0:19:32.66:0,33,833	0/0:17,0:17:33.09:0,33,833	0/1:31,0:31:2.73:3,0,133	0/0:13,0:13:16.76:0,17,217	0/0:25,0:25:36.07:0,36,616	0/0:18,0:19:18.76:0,19,118	0/0:17,0:17:27.07:0,27,707	0/0:16,0:15:42.11:0,42,1035	0/0:16,0:16:45.14:0,45,1208	0/0:23,0:24:19.90:0,20,290	1/1:8,5:13:21.07:404,21,0	0/0:11,0:11:17.83:0,18,212	1/1:0,6:6:12.04:250,12,0	0/0:12,0:12:4.42:0,4,13	0/0:19,0:19:2.50:0,2,345	0/0:16,0:15:15.66:0,16,188	0/0:17,0:17:33.10:0,33,906	0/0:20,0:20:48.16:0,48,1364	0/0:26,0:26:63.19:0,63,1607	0/0:24,0:22:20.25:0,20,214	0/0:22,0:22:23.65:0,24,320	0/0:20,0:20:7.53:0,8,65	0/0:16,0:16:22.59:0,23,196
chr10	57936207	.	ACT	A	138.16	PASS	AB=0.959;AC=11;AF=0.220;AN=50;BaseQRankSum=-0.355;DP=560;FS=4.171;HRun=0;HaplotypeScore=119.8170;InbreedingCoeff=-0.1754;MQ=50.63;MQ0=18;MQRankSum=3.529;QD=0.63;ReadPosRankSum=0.995;VQSLOD=2.2814;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/0:16,0:15:20.82:0,21,155	./.	./.	0/1:11,0:11:0:0,0,0	0/1:23,0:23:48.85:49,0,263	0/0:24,0:19:11.55:0,12,89	0/0:31,0:29:32.34:0,32,205	0/0:16,0:14:11.95:0,12,111	0/0:24,0:24:44.86:0,45,409	0/1:14,0:14:12.51:13,0,19	0/1:22,0:22:0.94:1,0,239	0/1:22,5:25:14.41:14,0,198	0/1:22,0:22:53.71:54,0,164	0/0:21,0:20:14.48:0,14,128	0/1:20,0:17:6.69:19,0,7	0/0:9,0:9:12.37:0,12,87	0/1:9,0:8:29.72:30,0,55	0/0:11,0:10:12.81:0,13,101	0/0:14,0:13:19.21:0,19,166	0/0:19,0:14:8.94:0,9,68	0/1:12,6:17:16.59:17,0,117	0/1:19,1:20:32.06:32,0,174	0/1:33,0:33:40.78:41,0,292	0/0:23,0:20:16.97:0,17,128	0/0:20,0:20:25.39:0,25,207	0/0:20,0:17:5.22:0,5,32	0/0:8,0:8:9.75:0,10,59
chr10	57936235	.	T	TCACACACACACA	3886.73	PASS	AB=1.000;AC=33;AF=0.635;AN=52;BaseQRankSum=2.357;DP=517;FS=18.283;HRun=0;HaplotypeScore=190.5881;InbreedingCoeff=0.4951;MQ=42.70;MQ0=15;MQRankSum=-6.299;QD=12.62;ReadPosRankSum=-3.469;VQSLOD=0.7934;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:19:6.02:154,6,0	./.	0/0:11,0:1:3.01:0,3,31	./.	1/1:7,0:7:3.01:44,3,0	0/0:23,0:23:42.07:0,42,1190	0/0:30,0:25:14.47:0,14,641	0/1:32,0:29:59.11:443,0,59	1/1:7,8:18:6.02:282,6,0	1/1:21,0:21:33.07:439,33,0	1/1:12,0:12:3.01:50,3,0	0/0:24,0:25:36.07:0,36,797	0/0:19,0:18:26.62:0,27,859	0/0:22,0:22:27.09:0,27,852	1/1:24,0:22:6.02:156,6,0	1/1:24,0:20:17.89:436,18,0	1/1:12,0:11:6.02:157,6,0	0/1:10,0:9:12.38:13,0,12	1/1:4,2:5:5.98:195,6,0	1/1:14,0:13:3.01:48,3,0	1/1:24,0:20:0.94:1,1,0	0/1:18,0:18:56.10:56,0,404	0/0:19,0:19:16.75:0,17,458	0/0:36,0:36:51.17:0,51,1627	1/1:16,0:14:3.01:125,3,0	1/1:19,0:17:28.34:909,28,0	1/1:6,0:14:4.37:176,4,0	1/1:6,0:6:6.02:200,6,0
chr10	57936804	.	CG	C	2676.58	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.741;DP=782;FS=0.000;HRun=3;HaplotypeScore=74.6037;InbreedingCoeff=0.9998;MQ=88.93;MQ0=0;MQRankSum=-2.838;QD=31.12;ReadPosRankSum=3.984;VQSLOD=3.5028;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,40:44:99:1445,117,0	0/0:14,0:14:42.13:0,42,588	0/0:27,0:27:78.25:0,78,1081	0/0:29,0:29:84.06:0,84,1096	1/1:0,18:18:51.16:632,51,0	0/0:26,0:26:78.26:0,78,1122	0/0:33,0:33:96.31:0,96,1361	0/0:41,0:41:99:0,111,1548	0/0:40,0:40:99:0,120,1705	0/0:22,0:22:66.21:0,66,933	0/0:11,0:11:33.11:0,33,475	0/0:28,0:28:84.28:0,84,1208	0/0:25,0:25:72.18:0,72,992	0/0:21,0:21:63.21:0,63,906	0/0:37,0:37:99:0,105,1511	0/0:30,0:30:87.28:0,87,1235	0/0:36,0:36:99:0,108,1536	1/1:1,23:24:60.19:743,60,0	0/0:22,0:22:66.22:0,66,948	0/0:22,0:22:60.17:0,60,823	0/0:57,0:57:99:0,163,2304	0/0:17,0:17:51.13:0,51,694	0/0:12,0:12:33.11:0,33,469	0/0:32,0:32:93.30:0,93,1313	0/0:26,0:26:78.24:0,78,1087	0/0:27,0:27:69.19:0,69,968	0/0:36,0:36:99:0,108,1494	0/0:25,0:25:63.21:0,63,900
chr10	57937060	.	AG	A	5303.47	PASS	AB=0.919;AC=30;AF=0.536;AN=56;BaseQRankSum=2.461;DP=648;FS=3.272;HRun=10;HaplotypeScore=81.8785;InbreedingCoeff=0.4885;MQ=76.34;MQ0=0;MQRankSum=-2.378;QD=12.11;ReadPosRankSum=4.897;VQSLOD=4.7376;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:73.59:0,74,452	0/1:10,0:10:4.50:5,0,169	0/0:24,1:25:12.75:0,13,329	0/1:17,1:18:0.72:1,0,230	0/0:24,0:24:49.96:0,50,309	0/0:23,0:23:57.11:0,57,603	0/1:25,4:29:31.58:32,0,574	0/1:15,1:17:4.35:4,0,131	1/1:4,14:18:41.98:365,42,0	1/1:3,16:19:50.99:442,51,0	1/1:3,11:14:4.86:209,5,0	0/0:23,0:23:19.07:0,19,422	0/0:22,1:23:25.02:0,25,464	0/1:24,4:28:32.06:32,0,564	1/1:3,24:27:62.98:547,63,0	0/1:26,2:28:7.81:8,0,565	0/0:21,1:22:28.04:0,28,509	0/0:16,0:16:35.18:0,35,208	1/1:8,20:28:67.99:574,68,0	1/1:8,13:22:40.55:343,41,0	1/1:5,21:29:67.03:559,67,0	0/1:16,1:17:15.99:16,0,276	0/0:24,0:24:54.10:0,54,568	0/1:27,5:32:35.08:35,0,540	1/1:1,17:18:41.99:365,42,0	1/1:6,27:33:86.63:735,87,0	1/1:3,27:32:79.05:663,79,0	1/1:1,14:16:44.02:371,44,0
chr10	57938733	.	GC	G	9782.76	PASS	AB=1.000;AC=51;AF=0.944;AN=54;BaseQRankSum=-3.418;DP=334;FS=0.000;HRun=4;HaplotypeScore=34.8491;InbreedingCoeff=0.4428;MQ=72.42;MQ0=0;MQRankSum=-3.405;QD=30.01;ReadPosRankSum=2.296;VQSLOD=4.0136;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,12:14:36.11:431,36,0	1/1:1,2:3:3.01:36,3,0	0/1:2,0:2:0.47:0,0,35	0/0:5,1:7:4.77:0,5,26	1/1:1,2:3:6.02:72,6,0	1/1:0,4:4:12.04:144,12,0	1/1:1,26:27:75.23:899,75,0	1/1:2,5:7:14.96:161,15,0	1/1:1,6:7:18.05:215,18,0	1/1:0,10:10:27.02:283,27,0	1/1:1,2:3:6.02:72,6,0	1/1:0,15:15:39.12:468,39,0	1/1:0,9:9:24.07:288,24,0	1/1:2,12:14:27.08:324,27,0	1/1:0,8:8:24.07:287,24,0	1/1:1,7:8:18.05:216,18,0	1/1:2,32:34:84.26:1007,84,0	1/1:1,40:41:99:1404,117,0	1/1:1,14:15:39.11:456,39,0	1/1:1,1:2:3.01:36,3,0	1/1:2,37:39:99:1183,99,0	1/1:1,2:3:6.02:72,6,0	./.	1/1:0,26:26:72.22:864,72,0	1/1:0,7:7:18.06:216,18,0	1/1:1,9:10:21.05:239,21,0	1/1:0,13:13:33.10:396,33,0	1/1:2,0:2:2.90:16,3,0
chr10	57940568	.	GA	G	9760.40	PASS	AB=1.000;AC=35;AF=0.625;AN=56;BaseQRankSum=14.468;DP=595;FS=4.170;HRun=9;HaplotypeScore=76.9880;InbreedingCoeff=0.9236;MQ=72.93;MQ0=0;MQRankSum=-1.323;QD=22.97;ReadPosRankSum=0.957;VQSLOD=5.7795;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,35:35:99:906,99,0	1/1:0,10:10:27.01:247,27,0	0/0:16,0:16:33.04:0,33,337	0/1:11,0:9:13.51:14,0,29	1/1:3,37:40:99:961,105,0	0/0:24,0:25:63.02:0,63,706	0/0:13,0:13:39.12:0,39,450	1/1:6,18:24:51.02:467,51,0	1/1:2,14:16:36.02:330,36,0	1/1:4,24:28:72.03:659,72,0	1/1:0,26:26:75.03:686,75,0	0/0:8,0:8:21.06:0,21,242	0/0:16,0:16:45.13:0,45,519	0/0:15,0:15:39.11:0,39,441	1/1:3,24:27:66.03:604,66,0	0/0:24,0:24:69.21:0,69,796	1/1:2,31:33:75.04:686,75,0	1/1:3,12:15:30.01:275,30,0	1/1:1,21:22:63.03:577,63,0	1/1:2,30:32:87.04:796,87,0	1/1:0,10:10:24.01:220,24,0	0/0:19,0:19:45.12:0,45,510	0/0:28,0:28:81.24:0,81,935	0/0:6,0:6:15.04:0,15,173	1/1:2,32:34:87.05:796,87,0	1/1:1,19:20:57.02:521,57,0	1/1:2,27:29:75.04:686,75,0	1/1:0,13:13:36.02:330,36,0
chr10	57941785	.	AGTTACTG	A	2797.29	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.426;DP=684;FS=2.900;HRun=0;HaplotypeScore=161.0032;InbreedingCoeff=0.9938;MQ=74.38;MQ0=0;MQRankSum=-9.489;QD=32.91;ReadPosRankSum=-0.011;VQSLOD=3.4848;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,36:41:72.72:1822,73,0	0/0:7,0:7:21.07:0,21,860	0/0:27,0:25:72.23:0,72,2514	0/0:33,0:32:90.29:0,90,3170	1/1:1,26:27:20.76:433,21,0	0/0:20,0:20:60.21:0,60,2409	0/0:22,0:22:66.23:0,66,2704	0/0:36,0:36:99:0,105,3785	0/0:25,0:25:75.26:0,75,3056	0/0:22,0:22:63.22:0,63,2508	0/0:16,0:16:42.14:0,42,1665	0/0:25,0:25:75.25:0,75,2879	0/0:22,0:22:66.23:0,66,2636	0/0:23,0:23:69.24:0,69,2785	0/0:25,0:25:75.26:0,75,3042	0/0:23,0:23:69.24:0,69,2778	0/0:33,0:33:93.32:0,93,3691	1/1:1,15:16:27.09:684,27,0	0/0:23,0:23:66.21:0,66,2483	0/0:26,0:26:78.27:0,78,3059	0/0:54,0:54:99:0,160,6244	0/0:27,0:27:81.28:0,81,3284	0/0:17,0:17:48.16:0,48,1940	0/0:22,0:22:63.22:0,63,2521	0/0:22,0:22:66.23:0,66,2683	0/0:25,0:25:75.26:0,75,2997	0/0:18,0:18:54.17:0,54,2037	0/0:6,0:6:18.06:0,18,723
chr10	57943225	.	TGTGGGAA	T	18677.90	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=17.264;DP=624;FS=10.560;HRun=0;HaplotypeScore=180.6776;InbreedingCoeff=0.9935;MQ=87.62;MQ0=0;MQRankSum=-18.579;QD=54.61;ReadPosRankSum=-0.334;VQSLOD=4.1730;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,20:27:42.62:1091,43,0	1/1:3,8:11:21.07:545,21,0	0/0:26,0:26:63.19:0,63,2210	0/0:31,0:31:56.86:0,57,2436	1/1:3,24:27:51.16:1281,51,0	0/0:21,0:21:63.22:0,63,2520	0/0:29,0:29:78.27:0,78,3006	1/1:8,12:20:35.21:934,35,0	1/1:3,17:21:48.16:1224,48,0	1/1:6,23:29:66.22:1675,66,0	1/1:1,22:24:60.16:1348,60,0	0/0:21,0:21:63.19:0,63,2277	0/0:23,0:23:69.24:0,69,2709	0/0:21,0:21:57.20:0,57,2230	1/1:3,31:34:87.30:2234,87,0	0/0:24,0:24:72.25:0,72,2880	1/1:1,14:15:27.09:679,27,0	1/1:1,4:5:12.04:309,12,0	1/1:2,9:11:18.06:467,18,0	1/1:3,15:18:42.14:1090,42,0	1/1:8,13:21:27.09:610,27,0	0/0:30,0:30:90.30:0,90,3458	0/0:23,0:23:60.20:0,60,2281	0/0:33,0:33:93.31:0,93,3472	1/1:3,21:24:63.22:1595,63,0	1/1:1,20:21:54.16:1346,54,0	1/1:5,16:21:47.96:1237,48,0	1/1:0,13:13:39.13:1012,39,0
chr10	57943338	.	C	CG	2618.17	PASS	AB=1.000;AC=33;AF=0.589;AN=56;BaseQRankSum=9.805;DP=495;FS=96.133;HRun=0;HaplotypeScore=85.4001;InbreedingCoeff=0.8750;MQ=85.17;MQ0=0;MQRankSum=-4.200;QD=11.19;ReadPosRankSum=-10.299;VQSLOD=-0.3383;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,18:19:5.26:77,5,0	1/1:9,0:9:9.21:90,9,0	0/0:24,0:24:68.39:0,68,864	0/0:21,0:20:20.34:0,20,571	1/1:8,0:8:14.93:115,15,0	0/0:29,0:29:84.27:0,84,1145	0/0:25,0:25:69.22:0,69,946	1/1:5,12:17:32.45:244,32,0	1/1:14,1:15:17.63:159,18,0	1/1:23,0:23:47.54:430,48,0	1/1:9,0:9:17.95:144,18,0	0/0:19,0:19:54.18:0,54,754	0/0:22,0:22:63.20:0,63,863	0/0:22,0:22:66.19:0,66,885	1/1:17,0:17:21:149,21,0	0/0:22,0:22:63.17:0,63,827	1/1:6,16:22:6.01:93,6,0	1/1:13,0:13:11.84:89,12,0	1/1:9,1:10:14.89:146,15,0	1/1:10,0:10:25.15:193,25,0	1/1:18,0:18:38.60:307,39,0	0/0:24,0:24:63.20:0,63,861	0/0:20,0:20:54.17:0,54,738	0/0:33,0:33:99:0,99,1362	1/1:15,0:15:24.83:228,25,0	1/1:15,0:15:27.24:243,27,0	0/1:8,0:8:13.14:38,0,13	1/1:6,0:6:14.32:95,14,0
chr10	57943569	.	T	TGTAA	27562.74	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-3.032;DP=664;FS=15.286;HRun=0;HaplotypeScore=109.5666;InbreedingCoeff=0.9988;MQ=79.05;MQ0=0;MQRankSum=-9.317;QD=66.10;ReadPosRankSum=0.974;VQSLOD=6.2353;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,45:51:99:3306,126,0	1/1:1,9:11:27.09:738,27,0	0/0:19,0:19:21.26:0,21,887	0/0:19,0:19:48.16:0,48,869	1/1:0,16:16:39.05:942,39,0	0/0:36,0:35:99:0,108,2011	0/0:26,0:26:75.22:0,75,1377	1/1:10,21:35:96.29:2432,96,0	1/1:0,16:17:42.14:1150,42,0	1/1:4,23:28:75.21:1890,75,0	1/1:1,17:20:54.05:1201,54,0	0/0:24,0:24:66.19:0,66,1162	0/0:17,0:17:48.16:0,48,930	0/0:34,0:34:99:0,102,1935	1/1:0,19:19:42.14:1150,42,0	0/0:23,0:23:66.21:0,66,1236	1/1:3,37:41:99:2757,102,0	1/1:0,21:22:51.13:1335,51,0	1/1:3,23:28:78.22:1892,78,0	1/1:1,11:13:35.72:791,36,0	1/1:3,31:34:90.27:2401,90,0	0/0:10,0:10:27.09:0,27,515	0/0:18,0:18:54.19:0,54,1046	0/0:21,0:21:60.19:0,60,1128	1/1:6,18:25:69.02:1579,69,0	1/1:3,15:21:60.19:1493,60,0	1/1:0,21:22:69.24:1881,69,0	1/1:2,9:11:24.08:625,24,0
chr10	57943655	.	GT	G	8193.73	PASS	AB=1.000;AC=35;AF=0.625;AN=56;BaseQRankSum=13.653;DP=574;FS=0.707;HRun=8;HaplotypeScore=96.7152;InbreedingCoeff=0.9310;MQ=80.77;MQ0=0;MQRankSum=-3.217;QD=22.76;ReadPosRankSum=2.620;VQSLOD=5.0227;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,32:36:93.10:887,93,0	1/1:3,8:11:24.04:232,24,0	0/0:31,0:27:54.46:0,54,557	0/1:22,0:17:9.12:9,0,229	1/1:2,22:24:62.19:603,62,0	0/0:27,0:27:81.21:0,81,952	0/0:24,0:24:66.19:0,66,785	1/1:5,24:29:69:643,69,0	1/1:2,13:15:42.07:406,42,0	1/1:1,21:22:63.10:606,63,0	1/1:5,16:21:53.39:488,53,0	0/0:21,0:21:63.17:0,63,740	0/0:16,0:16:45.14:0,45,542	0/0:19,0:19:54.13:0,54,615	1/1:5,16:21:59.99:561,60,0	0/0:27,1:28:46.24:0,46,828	1/1:7,29:35:93.15:898,93,0	1/1:4,8:12:24.03:232,24,0	1/1:5,9:14:32.54:299,33,0	1/1:1,19:20:50.87:468,51,0	1/1:0,14:14:33.05:319,33,0	0/0:20,0:20:60.06:0,60,675	0/0:15,0:15:42.13:0,42,506	0/0:13,0:13:36.11:0,36,434	1/1:2,21:23:51.08:490,51,0	1/1:6,11:17:41.96:388,42,0	1/1:0,16:16:48.08:463,48,0	1/1:0,7:7:21.03:203,21,0
chr10	57944008	.	TC	T	9624.71	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=10.245;DP=535;FS=0.373;HRun=7;HaplotypeScore=73.0876;InbreedingCoeff=0.9970;MQ=77.78;MQ0=0;MQRankSum=-4.421;QD=25.46;ReadPosRankSum=3.306;VQSLOD=5.5071;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,32:37:81.17:825,81,0	1/1:0,7:7:18.04:183,18,0	0/0:18,0:18:39.05:0,39,454	0/0:20,0:20:52.94:0,53,585	1/1:3,25:28:69.15:704,69,0	0/0:20,0:20:54.17:0,54,678	0/0:20,0:20:48.15:0,48,600	1/1:2,32:34:93.17:933,93,0	1/1:1,19:20:54.12:551,54,0	1/1:5,18:23:54.09:543,54,0	1/1:3,19:22:48.11:490,48,0	0/0:8,0:8:21.06:0,21,253	0/0:13,0:13:36.11:0,36,451	0/0:17,0:17:45.14:0,45,564	1/1:0,15:15:39.09:398,39,0	0/0:13,0:13:36.11:0,36,452	1/1:0,27:27:78.18:796,78,0	1/1:0,13:12:30.03:295,30,0	1/1:1,11:12:33.07:336,33,0	1/1:3,12:15:30.06:306,30,0	1/1:2,42:44:99:1193,117,0	0/0:11,0:11:33.11:0,33,415	0/0:8,0:8:21.06:0,21,253	0/0:9,0:9:24.08:0,24,301	1/1:2,11:13:30.07:306,30,0	1/1:3,28:31:78.16:789,78,0	1/1:2,24:26:66.14:673,66,0	1/1:1,10:11:30.07:306,30,0
chr10	57945204	.	GC	G	10415.54	PASS	AC=32;AF=0.593;AN=54;BaseQRankSum=14.331;DP=567;FS=8.221;HRun=1;HaplotypeScore=83.8130;InbreedingCoeff=0.9833;MQ=60.03;MQ0=4;MQRankSum=-2.282;QD=31.95;ReadPosRankSum=2.722;VQSLOD=3.9618;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	1/1:0,9:9:24.08:297,24,0	0/0:34,0:23:63.20:0,63,944	0/0:27,0:22:60.06:0,60,848	1/1:0,23:23:54.17:672,54,0	0/0:12,0:12:36.12:0,36,572	0/0:20,0:20:57.18:0,57,883	1/1:1,29:29:87.26:1058,87,0	1/1:0,8:8:24.08:297,24,0	1/1:0,11:11:33.01:362,33,0	1/1:2,8:10:27.06:319,27,0	0/0:8,0:8:24.08:0,24,383	0/0:21,0:21:63.21:0,63,1004	0/0:28,0:28:81.26:0,81,1263	1/1:1,17:18:48.11:577,48,0	0/0:11,0:11:33.10:0,33,502	1/1:2,30:32:81.25:1003,81,0	1/1:2,28:30:77.58:965,78,0	1/1:1,21:21:63.13:728,63,0	1/1:1,22:24:60.15:725,60,0	1/1:4,37:41:99:1300,105,0	0/0:18,0:18:42.14:0,42,666	0/0:10,0:10:24.08:0,24,372	0/0:20,0:20:57.19:0,57,903	1/1:0,18:18:47.98:571,48,0	1/1:0,16:16:48.06:542,48,0	1/1:0,29:29:75.24:927,75,0	1/1:0,5:5:6.02:74,6,0
chr10	57945205	.	CA	C	10402.67	PASS	AC=32;AF=0.593;AN=54;BaseQRankSum=14.224;DP=564;FS=6.717;HRun=2;HaplotypeScore=83.2333;InbreedingCoeff=0.9834;MQ=60.96;MQ0=4;MQRankSum=-1.056;QD=32.31;ReadPosRankSum=2.738;VQSLOD=4.6784;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	1/1:9,0:9:24.08:297,24,0	0/0:33,1:23:60.18:0,60,818	0/0:28,0:23:60.10:0,60,821	1/1:23,0:23:54.16:659,54,0	0/0:13,0:13:39.12:0,39,566	0/0:20,0:20:57.19:0,57,853	1/1:31,0:30:87.26:1058,87,0	1/1:8,0:8:24.08:297,24,0	1/1:11,0:11:33.01:362,33,0	1/1:9,0:9:27.06:319,27,0	0/0:8,0:8:24.08:0,24,360	0/0:22,0:22:66.21:0,66,969	0/0:27,0:27:81.24:0,81,1167	1/1:17,0:17:48.03:577,48,0	0/0:10,0:10:30.10:0,30,450	1/1:31,0:31:81.25:1003,81,0	1/1:30,0:30:77.58:965,78,0	1/1:22,0:21:63.13:728,63,0	1/1:23,0:24:60.15:725,60,0	1/1:39,0:39:99:1300,105,0	0/0:18,0:18:42.13:0,42,611	0/0:10,0:10:27.07:0,27,376	0/0:20,0:20:57.19:0,57,851	1/1:18,0:18:47.98:571,48,0	1/1:16,0:16:48.06:542,48,0	1/1:29,0:29:75.24:927,75,0	1/1:5,0:5:6.02:74,6,0
chr10	57945789	.	CTTTGTGTGTGTGTGTGTGTGTGTG	C	502.59	PASS	AB=1.000;AC=12;AF=0.222;AN=54;BaseQRankSum=3.185;DP=523;FS=6.481;HRun=0;HaplotypeScore=309.8205;InbreedingCoeff=0.5657;MQ=70.58;MQ0=10;MQRankSum=-1.888;QD=3.18;ReadPosRankSum=-0.732;VQSLOD=1.5431;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:26:8.78:0,9,316	0/0:4,0:4:6.01:0,6,122	0/0:33,0:24:24.73:0,25,488	0/0:25,0:18:40.94:0,41,432	0/0:13,0:13:6:0,6,189	0/0:18,0:18:48.10:0,48,1971	0/0:16,0:16:48.03:0,48,1413	0/1:27,0:27:3.07:3,0,29	1/1:13,1:14:3.01:186,3,0	1/1:18,0:18:5.50:38,6,0	./.	0/0:29,0:28:69.22:0,69,3168	0/0:17,0:17:48.06:0,48,1611	0/0:21,0:21:57.05:0,57,2556	0/1:18,0:18:0.01:0,0,0	0/0:19,0:18:48.08:0,48,975	0/0:17,0:17:17.06:0,17,263	0/0:18,0:16:19.28:0,19,325	0/0:16,0:16:0.82:0,1,2	0/1:5,0:5:0:0,0,0	1/1:44,0:44:3:25,3,0	0/0:13,0:13:32.33:0,32,1002	0/0:14,0:13:30.01:0,30,451	0/0:31,0:31:85.23:0,85,2583	0/1:12,0:11:0:0,0,0	0/0:14,0:14:2.94:0,3,81	1/1:17,3:18:6:371,6,0	0/0:12,0:12:1.23:0,1,3
chr10	57947600	.	A	ACAAGGTCGACC	38743.99	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=7.618;DP=589;FS=35.717;HRun=0;HaplotypeScore=200.0748;InbreedingCoeff=0.9903;MQ=71.36;MQ0=0;MQRankSum=-18.298;QD=113.62;ReadPosRankSum=-0.805;VQSLOD=3.2043;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:16,15:31:66.23:3597,66,0	1/1:1,5:6:15.05:848,15,0	0/0:11,0:11:24.08:0,24,812	0/0:23,0:23:48.16:0,48,1407	1/1:9,7:17:30.10:1534,30,0	0/0:23,0:23:69.21:0,69,1955	0/0:27,0:27:72.25:0,72,2406	1/1:27,1:32:78.26:3013,78,0	1/1:10,14:28:66.61:3139,67,0	1/1:10,9:22:54.19:2734,54,0	1/1:4,2:6:12.04:598,12,0	0/0:19,0:19:57.20:0,57,1898	0/0:18,0:18:54.17:0,54,1793	0/0:33,0:33:96.31:0,96,3082	1/1:12,11:25:51.15:2469,51,0	0/0:29,0:29:84.29:0,84,2756	1/1:12,13:28:69.24:3251,69,0	1/1:6,7:15:30.10:1595,30,0	1/1:9,10:19:51.13:2491,51,0	1/1:7,3:10:15.05:704,15,0	1/1:13,12:27:60.21:3040,60,0	0/0:24,0:24:57.20:0,57,1910	0/0:27,0:27:75.24:0,75,2516	0/0:14,0:14:39.13:0,39,1292	1/1:7,8:15:39.13:2101,39,0	1/1:13,6:21:54.12:2492,54,0	1/1:10,15:30:72.25:3908,72,0	1/1:4,4:8:24.08:1230,24,0
chr10	57947935	.	CCTTGGTCATGGTGT	C	19942.90	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=16.130;DP=482;FS=15.914;HRun=0;HaplotypeScore=199.8382;InbreedingCoeff=0.9315;MQ=50.40;MQ0=2;MQRankSum=-14.895;QD=73.32;ReadPosRankSum=1.872;VQSLOD=3.6009;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,24:28:36.04:1332,36,0	1/1:1,5:6:15.05:639,15,0	0/0:10,0:5:15.05:0,15,752	0/0:11,0:8:19.78:0,20,960	1/1:2,16:18:39.13:1661,39,0	0/0:23,0:23:66.23:0,66,4377	0/0:21,0:21:60.20:0,60,3783	1/1:5,14:17:35.89:735,36,0	1/1:1,18:19:30.10:1279,30,0	1/1:1,21:22:51.05:1875,51,0	1/1:3,13:16:24.08:1023,24,0	0/0:20,0:20:60.21:0,60,3701	0/0:24,0:24:72.22:0,72,4338	0/0:22,0:22:66.23:0,66,4341	1/1:3,15:18:42.13:1790,42,0	0/0:20,0:20:60.21:0,60,4067	1/1:4,7:11:6.02:256,6,0	1/1:2,15:17:10.15:1131,10,0	1/1:4,13:17:36.02:1131,36,0	1/1:2,8:10:12.04:511,12,0	1/1:3,3:6:9.03:361,9,0	0/0:17,0:17:48.16:0,48,3090	0/0:22,0:22:66.20:0,66,4221	0/0:20,0:20:60.21:0,60,4136	1/1:0,5:5:12.04:511,12,0	1/1:1,23:25:69.13:2638,69,0	1/1:4,28:32:69.24:2941,69,0	1/1:0,3:3:3.01:128,3,0
chr10	57948084	.	T	TAA	13221.85	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-9.249;DP=479;FS=23.426;HRun=8;HaplotypeScore=49.9594;InbreedingCoeff=0.9806;MQ=66.15;MQ0=1;MQRankSum=-2.653;QD=36.52;ReadPosRankSum=0.825;VQSLOD=3.2884;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,21:22:54.18:857,54,0	1/1:1,7:9:24.04:353,24,0	0/0:9,0:9:20.67:0,21,187	0/0:4,0:4:11.49:0,11,92	1/1:5,28:33:84.11:1222,84,0	0/0:10,0:10:30.08:0,30,334	0/0:12,0:12:27.05:0,27,301	1/1:2,19:22:57.18:882,57,0	1/1:3,13:16:36.08:540,36,0	1/1:2,29:31:84.25:1286,84,0	1/1:4,19:23:54.14:820,54,0	0/0:12,0:12:36.08:0,36,392	0/0:8,0:8:24.06:0,24,266	0/0:12,0:12:33.07:0,33,357	1/1:2,12:15:29.59:437,30,0	0/0:18,0:18:54.15:0,54,602	1/1:6,16:22:39.13:619,39,0	1/1:0,16:16:42.14:667,42,0	1/1:5,15:21:48.15:715,48,0	1/1:2,24:26:38.73:981,39,0	1/1:2,3:5:9.03:143,9,0	0/0:14,0:14:39.10:0,39,435	0/0:13,0:13:36.10:0,36,401	0/0:5,0:5:12.02:0,12,134	1/1:1,27:29:75.21:1153,75,0	1/1:5,20:26:63.20:958,63,0	1/1:4,20:25:56.68:865,57,0	1/1:0,19:20:47.65:723,48,0
chr10	57949486	.	GA	G	1144.26	PASS	AB=0.917;AC=7;AF=0.125;AN=56;BaseQRankSum=9.354;DP=612;FS=1.757;HRun=10;HaplotypeScore=67.7476;InbreedingCoeff=0.8372;MQ=53.27;MQ0=12;MQRankSum=-0.231;QD=13.31;ReadPosRankSum=3.112;VQSLOD=3.8284;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,22:24:35.28:424,35,0	0/0:6,0:6:15.04:0,15,166	0/0:12,0:11:29.85:0,30,297	0/1:10,1:8:8.87:9,0,173	1/1:4,30:34:59.89:616,60,0	0/0:17,0:18:47.89:0,48,486	0/0:24,0:23:63.08:0,63,669	0/0:30,0:27:72.19:0,72,796	0/0:18,0:17:45.12:0,45,498	0/0:28,0:28:80.95:0,81,836	0/0:19,0:19:45.12:0,45,496	0/0:12,0:10:21.02:0,21,219	0/0:18,0:17:48.13:0,48,531	0/0:15,0:16:47.96:0,48,509	0/0:31,0:31:87.23:0,87,959	0/0:25,0:24:63.64:0,64,696	0/0:24,0:23:54.15:0,54,595	1/1:4,13:15:12.27:240,12,0	0/0:22,0:18:47.90:0,48,479	0/0:26,0:26:49.31:0,49,737	0/0:18,0:18:53.99:0,54,565	0/0:24,0:22:54.15:0,54,595	0/0:18,0:17:45.06:0,45,473	0/0:31,0:31:75.20:0,75,822	0/0:19,0:19:44.60:0,45,495	0/0:35,0:33:87.20:0,87,944	0/0:24,0:24:53.80:0,54,549	0/0:26,0:26:63.12:0,63,673
chr10	57951434	.	A	AG	4844.44	PASS	AB=0.933;AC=9;AF=0.161;AN=56;BaseQRankSum=-10.361;DP=829;FS=0.758;HRun=1;HaplotypeScore=81.4473;InbreedingCoeff=0.8723;MQ=57.46;MQ0=0;MQRankSum=4.861;QD=27.06;ReadPosRankSum=2.379;VQSLOD=4.7892;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,42:43:99:1519,102,0	0/0:11,0:11:33.11:0,33,429	0/0:29,0:23:69.21:0,69,870	0/0:18,0:15:42.14:0,42,544	1/1:1,28:29:63.21:944,63,0	0/0:32,0:32:93.29:0,93,1192	0/0:28,0:28:84.26:0,84,1076	0/1:39,3:40:13.84:14,0,1249	0/0:34,1:35:64.14:0,64,1268	0/0:22,0:22:66.20:0,66,825	0/0:19,0:19:57.17:0,57,726	0/0:42,0:42:99:0,126,1622	0/0:27,0:27:78.25:0,78,1013	0/0:39,0:39:99:0,117,1491	0/0:42,0:42:99:0,126,1622	1/1:2,33:35:45.72:1175,46,0	0/0:18,0:18:54.18:0,54,701	1/1:1,29:30:81.27:1193,81,0	0/0:23,0:23:63.20:0,63,804	0/0:35,0:35:99:0,105,1347	0/0:64,1:65:99:0,142,2281	0/0:20,0:20:57.19:0,57,739	0/0:21,0:21:60.20:0,60,779	0/0:31,1:32:48.33:0,48,1124	0/0:22,0:22:66.21:0,66,857	0/0:24,0:24:72.22:0,72,910	0/0:35,0:34:99:0,99,1271	0/0:11,0:11:33.11:0,33,429
chr10	57952636	.	T	TG	2629.79	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=4.384;DP=587;FS=9.860;HRun=6;HaplotypeScore=64.0806;InbreedingCoeff=0.9965;MQ=85.44;MQ0=0;MQRankSum=-0.586;QD=30.94;ReadPosRankSum=1.922;VQSLOD=3.9521;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,36:38:99:1281,102,0	0/0:10,0:10:24.05:0,24,242	0/0:21,0:21:42.06:0,42,417	0/0:22,0:22:36.62:0,37,341	1/1:4,16:20:42.13:528,42,0	0/0:33,0:33:93.09:0,93,912	0/0:21,0:21:63.14:0,63,642	0/0:28,0:28:57.11:0,57,572	0/0:20,0:20:60.12:0,60,605	0/0:35,0:35:93.17:0,93,938	0/0:24,0:24:63.13:0,63,637	0/0:15,0:15:45.10:0,45,459	0/0:18,0:18:54.10:0,54,541	0/0:23,0:23:63.14:0,63,643	0/0:22,0:22:60.12:0,60,605	1/1:1,18:19:54.17:679,54,0	0/0:20,0:20:60.10:0,60,600	1/1:0,8:8:24.08:301,24,0	0/0:24,0:24:60.08:0,60,599	0/0:25,0:25:72.14:0,72,727	0/0:18,0:18:51.11:0,51,520	0/0:22,0:22:60.13:0,60,607	0/0:19,0:19:51.12:0,51,520	0/0:15,0:15:42.09:0,42,429	0/0:15,0:15:45.10:0,45,459	0/0:21,0:21:57.12:0,57,581	0/0:25,0:25:63.14:0,63,643	0/0:6,0:6:18.04:0,18,183
chr10	57953376	.	A	AC	2607.68	PASS	AB=0.531;AC=7;AF=0.125;AN=56;BaseQRankSum=-8.823;DP=549;FS=0.986;HRun=2;HaplotypeScore=51.2116;InbreedingCoeff=0.8781;MQ=86.80;MQ0=0;MQRankSum=-2.200;QD=30.68;ReadPosRankSum=0.627;VQSLOD=3.0838;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,18:18:48.16:691,48,0	0/0:16,0:16:45.14:0,45,556	0/0:20,0:20:50.88:0,51,540	0/0:16,0:16:38.22:0,38,473	1/1:0,24:25:59.92:754,60,0	0/0:36,0:36:96.26:0,96,1152	0/0:17,0:17:48.12:0,48,578	0/0:22,0:22:66.19:0,66,799	0/0:21,0:20:57.15:0,57,681	0/0:23,0:23:69.22:0,69,849	0/0:23,0:23:66.11:0,66,739	0/0:18,0:18:51.16:0,51,632	0/0:17,0:17:51.15:0,51,619	0/0:24,0:24:69.21:0,69,843	0/0:20,0:20:60.19:0,60,743	0/1:3,23:26:5.11:837,0,5	0/0:15,0:15:45.11:0,45,531	1/1:3,13:16:33.11:475,33,0	0/0:11,0:11:33.09:0,33,398	0/0:34,0:34:90.19:0,90,1058	0/0:21,0:21:63.20:0,63,781	0/0:21,0:21:63.19:0,63,768	0/0:14,0:14:42.11:0,42,505	0/0:10,0:10:30.09:0,30,372	0/0:14,0:14:42.11:0,42,505	0/0:19,0:19:51.14:0,51,612	0/0:23,0:23:69.22:0,69,854	0/0:9,0:9:27.08:0,27,334
chr10	57953669	.	A	ACTGT	22655.57	PASS	AB=1.000;AC=37;AF=0.661;AN=56;BaseQRankSum=-6.735;DP=623;FS=0.000;HRun=0;HaplotypeScore=110.1036;InbreedingCoeff=0.9221;MQ=80.59;MQ0=0;MQRankSum=-6.718;QD=56.08;ReadPosRankSum=0.446;VQSLOD=6.2123;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:36,0:36:93.03:1634,93,0	1/1:4,9:14:27.09:711,27,0	0/0:21,0:22:54.11:0,54,845	0/1:16,0:16:14.81:15,0,419	1/1:21,0:21:47.90:739,48,0	0/0:18,0:18:45.13:0,45,806	0/0:20,0:20:48.16:0,48,883	1/1:7,17:27:75.21:1775,75,0	1/1:1,20:21:51.18:1376,51,0	1/1:5,17:23:66.22:1682,66,0	1/1:2,21:23:39.13:1051,39,0	0/0:32,0:32:93.30:0,93,1713	0/0:30,0:30:75.26:0,75,1412	0/0:29,0:29:87.30:0,87,1652	1/1:2,16:18:42.14:1133,42,0	1/1:19,0:19:57.20:1114,57,0	1/1:0,15:16:39.13:1053,39,0	1/1:8,0:8:21.07:402,21,0	1/1:7,17:24:66.23:1602,66,0	1/1:1,21:23:39.13:1051,39,0	1/1:2,23:27:54.19:1456,54,0	0/0:20,0:20:60.18:0,60,1102	0/0:26,0:26:72.18:0,72,1232	0/0:22,0:22:66.23:0,66,1244	1/1:4,17:21:42.14:1132,42,0	1/1:3,19:23:66.22:1671,66,0	1/1:3,27:31:78.11:2088,78,0	1/1:0,12:12:36.12:972,36,0
chr10	57953670	.	C	CTGTT	18898.78	PASS	AB=1.000;AC=36;AF=0.643;AN=56;BaseQRankSum=14.672;DP=622;FS=0.655;HRun=0;HaplotypeScore=124.2094;InbreedingCoeff=0.8447;MQ=80.34;MQ0=0;MQRankSum=-4.573;QD=47.01;ReadPosRankSum=1.997;VQSLOD=5.3797;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,33:39:99:2550,105,0	1/1:14,0:14:5.11:495,5,0	0/0:22,0:22:54.13:0,54,907	0/1:16,0:16:5.24:5,0,452	1/1:4,20:25:54.10:1138,54,0	0/0:16,0:16:45.13:0,45,827	0/0:20,0:20:51.16:0,51,926	1/1:25,0:25:65.09:1248,65,0	1/1:21,0:21:51.17:976,51,0	1/1:22,0:22:63.22:1150,63,0	1/1:22,0:22:39.13:759,39,0	0/0:34,0:34:93.32:0,93,1770	0/0:29,0:29:78.25:0,78,1468	0/0:30,0:30:87.30:0,87,1687	1/1:18,0:18:20.16:790,20,0	1/1:2,19:21:63.18:1662,63,0	1/1:15,0:15:39.13:728,39,0	1/1:0,7:7:21.07:575,21,0	1/1:22,0:22:60.08:996,60,0	1/1:22,0:22:39.13:760,39,0	1/1:25,0:25:54.19:1032,54,0	0/0:21,0:21:60.21:0,60,1152	0/0:26,0:26:75.21:0,75,1328	0/0:22,0:22:66.23:0,66,1279	0/1:21,0:21:21.82:760,0,22	1/1:23,0:23:63.16:1105,63,0	1/1:32,0:31:78.11:1491,78,0	1/1:12,0:12:36.12:679,36,0
chr10	57954395	.	CA	C	1475.26	PASS	AB=0.587;AC=3;AF=0.054;AN=56;BaseQRankSum=10.252;DP=553;FS=5.645;HRun=1;HaplotypeScore=72.2237;InbreedingCoeff=0.0603;MQ=71.91;MQ0=5;MQRankSum=-6.856;QD=20.78;ReadPosRankSum=0.261;VQSLOD=3.5702;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:3,21:24:20.73:644,0,21	0/0:6,0:6:15.05:0,15,240	0/0:24,0:19:47.34:0,47,790	0/0:22,0:16:41.28:0,41,653	0/1:13,15:27:99:434,0,158	0/0:23,0:23:69.24:0,69,1102	0/0:21,0:21:57.19:0,57,909	0/0:23,0:23:69.22:0,69,1060	0/0:17,0:16:45.15:0,45,715	0/0:28,0:27:72.20:0,72,1105	0/0:18,0:18:48.16:0,48,767	0/0:23,0:23:66.20:0,66,1003	0/0:16,0:16:48.16:0,48,767	0/0:19,0:19:54.18:0,54,863	0/0:17,0:15:45.15:0,45,717	0/0:18,0:18:26.65:0,27,273	0/0:35,0:35:87.25:0,87,1331	0/1:5,14:16:6.71:497,0,7	0/0:13,0:12:36.12:0,36,555	0/0:18,0:18:48.15:0,48,744	0/0:14,0:14:33.10:0,33,503	0/0:25,0:25:72.23:0,72,1128	0/0:23,0:23:60.19:0,60,934	0/0:22,0:22:66.23:0,66,1054	0/0:16,0:15:42.14:0,42,671	0/0:18,0:17:48.16:0,48,747	0/0:14,0:14:42.13:0,42,632	0/0:9,0:9:27.09:0,27,422
chr10	57954471	.	G	GA	3530.69	PASS	AB=0.735;AC=30;AF=0.536;AN=56;BaseQRankSum=9.455;DP=533;FS=0.000;HRun=9;HaplotypeScore=117.9335;InbreedingCoeff=0.5110;MQ=55.09;MQ0=19;MQRankSum=-7.678;QD=9.97;ReadPosRankSum=-2.848;VQSLOD=1.7996;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:18:0.26:87,0,0	1/1:2,7:8:12.03:133,12,0	0/0:8,0:2:1.54:0,2,4	0/1:10,0:8:3.14:3,0,61	1/1:27,0:35:26.23:223,26,0	0/0:27,0:25:43.41:0,43,388	0/0:18,0:18:38.98:0,39,338	1/1:12,9:21:40.70:360,41,0	1/1:14,7:20:17.83:171,18,0	1/1:18,11:28:51.35:487,51,0	1/1:11,14:25:22.36:316,22,0	0/0:15,0:15:32.94:0,33,278	0/0:15,0:14:30.40:0,30,247	0/0:23,0:23:44.96:0,45,387	1/1:10,9:15:17.94:166,18,0	0/0:6,0:12:1.19:0,1,32	0/1:10,16:25:7.32:147,0,7	0/1:19,0:16:32.44:41,0,32	1/1:11,7:17:7.32:258,7,0	0/1:14,13:25:22.45:185,0,22	0/1:5,5:10:20.03:27,0,20	0/0:18,0:18:20.95:0,21,179	0/0:20,0:20:35.88:0,36,312	0/0:21,0:21:53.98:0,54,469	1/1:10,6:15:21.05:224,21,0	1/1:6,12:18:30.02:305,30,0	1/1:15,4:19:26.94:255,27,0	0/1:1,6:7:5.27:143,0,5
chr10	57954494	.	A	AAAAG	853.70	PASS	AB=0.941;AC=5;AF=0.089;AN=56;BaseQRankSum=7.724;DP=548;FS=1.891;HRun=0;HaplotypeScore=138.2675;InbreedingCoeff=0.3968;MQ=61.82;MQ0=10;MQRankSum=-7.269;QD=10.54;ReadPosRankSum=-2.385;VQSLOD=3.1016;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:12,2:14:31:94,0,31	0/0:8,0:8:4.28:0,4,156	0/0:14,0:8:12.59:0,13,200	0/0:23,0:17:38.09:0,38,440	1/1:34,2:35:12.02:525,12,0	0/0:27,0:25:72.25:0,72,1210	0/0:24,0:24:63.15:0,63,928	0/0:29,0:29:22.13:0,22,473	0/0:18,0:17:38.80:0,39,379	0/0:24,0:24:8.17:0,8,266	0/0:28,0:27:33.92:0,34,628	0/0:17,0:17:42.11:0,42,661	0/0:14,0:14:39.13:0,39,662	0/0:21,0:21:63.22:0,63,1061	0/0:16,0:16:19.23:0,19,270	0/1:13,0:12:28.98:88,0,29	0/0:18,0:18:17.18:0,17,189	0/1:17,1:14:1.51:266,0,2	0/0:27,0:24:23.76:0,24,454	0/0:26,0:26:25.36:0,25,367	0/0:8,0:8:14.34:0,14,215	0/0:15,0:15:39.04:0,39,509	0/0:20,0:19:47.81:0,48,744	0/0:19,0:19:57.13:0,57,859	0/0:19,0:19:34.67:0,35,300	0/0:22,0:22:40.69:0,41,454	0/0:21,0:21:51.23:0,51,575	0/0:9,0:9:26.90:0,27,300
chr10	57955200	.	GA	G	1741.11	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=12.464;DP=487;FS=1.982;HRun=8;HaplotypeScore=129.7282;InbreedingCoeff=0.8298;MQ=48.22;MQ0=15;MQRankSum=-11.778;QD=6.00;ReadPosRankSum=1.543;VQSLOD=0.5774;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:19,3:21:33.89:289,34,0	1/1:7,0:7:10.78:59,11,0	0/0:13,0:9:10.27:0,10,92	0/0:9,0:6:6.64:0,7,43	1/1:18,5:21:29.08:221,29,0	0/0:18,0:18:48.15:0,48,577	0/0:15,0:14:39.06:0,39,440	1/1:16,3:12:7.47:77,7,0	1/1:17,0:17:17.10:79,17,0	1/1:15,2:14:22.11:102,22,0	1/1:22,3:22:19.69:103,20,0	0/0:19,0:18:39.05:0,39,431	0/0:14,0:13:26.91:0,27,288	0/0:18,2:20:23.04:0,23,517	1/1:19,1:19:30.14:136,30,0	0/0:21,0:20:30.96:0,31,350	1/1:18,0:18:1.83:99,2,0	1/1:8,0:7:11.99:105,12,0	1/1:11,1:10:8.36:39,8,0	1/1:23,0:23:6.82:112,7,0	1/1:10,0:10:7.61:54,8,0	0/0:26,0:26:57.17:0,57,682	0/0:26,0:26:69.20:0,69,812	0/0:16,0:15:41.19:0,41,505	1/1:16,1:17:0.55:65,1,0	1/1:17,4:18:2.07:119,2,0	1/1:20,1:20:40.04:197,40,0	1/1:7,2:6:14.49:95,14,0
chr10	57955207	.	A	AGAACC	16864.63	PASS	AB=0.952;AC=35;AF=0.625;AN=56;BaseQRankSum=12.377;DP=498;FS=0.766;HRun=0;HaplotypeScore=121.7309;InbreedingCoeff=0.9154;MQ=51.32;MQ0=13;MQRankSum=-13.452;QD=54.58;ReadPosRankSum=-0.820;VQSLOD=5.2256;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,14:21:57.19:1220,57,0	1/1:1,4:5:15.05:440,15,0	0/0:17,0:11:24.20:0,24,419	0/0:14,0:8:17.20:0,17,281	1/1:16,11:25:68.38:1169,68,0	0/0:18,0:18:54.17:0,54,1164	0/0:20,0:19:48.08:0,48,967	1/1:8,5:12:28.92:620,29,0	1/1:2,10:16:35.59:1021,36,0	1/1:6,9:13:29.96:846,30,0	1/1:5,17:22:54.05:1416,54,0	0/0:21,0:20:60.12:0,60,1145	0/0:13,0:12:33.11:0,33,714	0/0:19,0:19:54.18:0,54,1189	1/1:2,17:18:35.84:1128,36,0	0/1:19,1:19:54.63:55,0,199	1/1:9,12:20:57.13:1467,57,0	1/1:4,3:6:15.05:302,15,0	1/1:4,4:8:16.81:366,17,0	1/1:4,13:19:41.85:1069,42,0	1/1:2,6:9:24.08:632,24,0	0/0:22,0:22:66.22:0,66,1392	0/0:26,0:26:75.26:0,75,1673	0/0:18,0:18:51.17:0,51,1147	1/1:4,10:18:45.02:1217,45,0	1/1:7,10:17:42.06:1057,42,0	1/1:6,20:25:69.24:2071,69,0	1/1:8,5:10:30.10:770,30,0
chr10	57955208	.	AG	A	4346.31	PASS	AB=0.933;AC=35;AF=0.625;AN=56;BaseQRankSum=14.540;DP=497;FS=1.189;HRun=1;HaplotypeScore=126.7442;InbreedingCoeff=0.9350;MQ=51.28;MQ0=13;MQRankSum=-12.926;QD=14.34;ReadPosRankSum=-0.554;VQSLOD=4.1155;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,14:21:52.46:377,52,0	1/1:4,1:5:14.28:97,14,0	0/0:17,0:11:20.06:0,20,193	0/1:13,1:8:3.36:3,0,88	1/1:17,11:26:41.90:323,42,0	0/0:18,0:18:54.02:0,54,551	0/0:20,0:19:42.53:0,43,445	1/1:19,0:13:38.78:296,39,0	1/1:15,0:15:34.69:214,35,0	1/1:17,0:14:35.77:269,36,0	1/1:23,1:21:53.98:331,54,0	0/0:20,0:19:50.55:0,51,493	0/0:12,0:11:29.92:0,30,297	0/0:20,0:20:48.96:0,49,539	1/1:20,0:19:41.13:285,41,0	0/0:19,0:18:11.33:0,11,164	1/1:20,0:20:47.79:334,48,0	1/1:4,3:6:13.55:105,14,0	1/1:9,0:8:19.93:138,20,0	1/1:16,0:17:36.30:216,36,0	1/1:8,1:9:26.12:179,26,0	0/0:22,0:22:62.35:0,62,620	0/0:26,0:26:74.02:0,74,765	0/0:20,0:19:28.81:0,29,511	1/1:17,0:17:46.49:296,46,0	1/1:19,1:18:45.92:302,46,0	1/1:25,1:25:62.52:392,63,0	1/1:11,2:10:29.09:189,29,0
chr10	57955209	.	G	GAACCAA	20228.37	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=8.370;DP=546;FS=2.588;HRun=0;HaplotypeScore=133.5563;InbreedingCoeff=0.9719;MQ=51.53;MQ0=13;MQRankSum=-13.983;QD=57.30;ReadPosRankSum=-0.981;VQSLOD=5.0229;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:27:61.09:1186,61,0	1/1:5,1:6:18.06:498,18,0	0/0:18,0:12:28.55:0,29,458	0/0:14,0:8:4.09:0,4,252	1/1:20,0:32:78.20:1391,78,0	0/0:19,0:19:51.15:0,51,1103	0/0:20,0:19:48.13:0,48,972	1/1:23,0:17:51.10:1136,51,0	1/1:13,2:15:35.79:1036,36,0	1/1:22,0:19:51.15:1281,51,0	1/1:25,2:24:69.15:1835,69,0	0/0:21,0:20:54.16:0,54,1146	0/0:12,0:11:33.11:0,33,710	0/0:21,0:21:60.15:0,60,1192	1/1:22,0:21:48.14:1244,48,0	1/1:19,0:18:38.84:412,39,0	1/1:20,2:21:57.19:1489,57,0	1/1:5,0:7:12.04:257,12,0	1/1:15,0:15:39.04:837,39,0	1/1:18,1:19:42.14:1193,42,0	1/1:9,1:10:27.08:731,27,0	0/0:21,0:21:60.17:0,60,1305	0/0:26,0:26:71.83:0,72,1630	0/0:20,0:20:57.12:0,57,1194	1/1:17,2:19:54.17:1460,54,0	1/1:20,1:20:54.14:1290,54,0	1/1:22,5:26:72.25:2131,72,0	1/1:9,4:11:30.10:822,30,0
chr10	57955210	.	A	AACC	7912.37	PASS	AB=1.000;AC=30;AF=0.536;AN=56;BaseQRankSum=14.477;DP=550;FS=1.525;HRun=0;HaplotypeScore=152.0333;InbreedingCoeff=0.6176;MQ=51.85;MQ0=12;MQRankSum=-15.232;QD=22.04;ReadPosRankSum=4.808;VQSLOD=4.6489;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:27:37.74:742,38,0	1/1:6,0:6:17.90:179,18,0	0/0:18,0:12:29.90:0,30,430	0/0:14,0:8:7.35:0,7,149	0/1:35,0:33:0.69:805,0,1	0/0:19,0:19:54.17:0,54,892	0/0:18,0:17:51.13:0,51,812	0/1:25,0:19:36.29:315,0,36	1/1:15,0:15:34.38:341,34,0	0/1:22,0:19:1.73:326,0,2	1/1:27,0:24:18.27:543,18,0	0/0:21,0:20:60.13:0,60,978	0/0:12,0:11:33.11:0,33,546	0/0:21,0:21:63.20:0,63,1020	0/1:22,0:21:11.48:340,0,11	1/1:3,17:21:39.13:767,39,0	1/1:21,0:21:56.59:507,57,0	1/1:8,0:7:12.03:165,12,0	0/1:16,0:16:69.99:185,0,70	0/1:18,0:18:5.31:402,0,5	1/1:10,0:10:7.54:280,8,0	0/0:21,0:21:60.16:0,60,982	0/0:26,0:26:75.23:0,75,1263	0/0:21,0:20:60.07:0,60,951	1/1:19,0:19:25.75:425,26,0	1/1:22,0:20:13.05:435,13,0	1/1:28,0:27:71.44:758,71,0	1/1:13,0:11:30.08:398,30,0
chr10	57955211	.	A	ACC	4088.92	PASS	AB=0.948;AC=27;AF=0.482;AN=56;BaseQRankSum=15.789;DP=554;FS=1.093;HRun=0;HaplotypeScore=154.3056;InbreedingCoeff=0.2141;MQ=54.20;MQ0=11;MQRankSum=-15.537;QD=10.87;ReadPosRankSum=5.992;VQSLOD=3.0806;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:26,2:27:15.07:441,15,0	1/1:6,0:6:14.46:93,14,0	0/0:19,0:13:32.70:0,33,460	0/1:15,0:9:13.48:13,0,177	0/1:33,2:33:99:514,0,110	0/0:18,0:18:54.18:0,54,861	0/0:17,0:17:51.16:0,51,791	0/1:23,3:20:99:142,0,167	1/1:15,0:15:31.31:183,31,0	0/1:21,2:20:53.68:143,0,54	0/1:24,3:24:21.09:271,0,21	0/0:21,0:20:60.20:0,60,958	0/0:13,0:12:33.11:0,33,524	0/0:22,0:22:63.21:0,63,999	0/1:20,1:20:27.32:168,0,27	1/1:21,0:20:35.97:336,36,0	1/1:22,0:21:8.71:186,9,0	0/1:9,0:8:5.82:93,0,6	0/1:15,1:16:52.73:53,0,142	0/1:17,0:17:32.22:207,0,32	0/1:10,0:10:40.13:140,0,40	0/0:21,0:21:60.16:0,60,930	0/0:26,0:26:75.23:0,75,1176	0/0:21,0:20:60.20:0,60,948	1/1:19,1:20:2.83:208,3,0	0/1:18,3:19:4.05:231,0,4	1/1:29,1:29:41.86:400,42,0	1/1:13,1:11:29.62:268,30,0
chr10	57955928	.	TGTAC	T	994.77	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=3.213;DP=695;FS=3.228;HRun=0;HaplotypeScore=192.2481;InbreedingCoeff=0.9275;MQ=71.03;MQ0=2;MQRankSum=-1.859;QD=19.13;ReadPosRankSum=-1.492;VQSLOD=3.3918;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,7:16:27.05:324,27,0	0/0:6,0:6:18:0,18,284	0/0:29,0:25:56.28:0,56,1199	0/0:29,0:27:65.26:0,65,1161	1/1:12,19:31:51.03:709,51,0	0/0:30,0:30:84.05:0,84,1754	0/0:27,0:27:74.99:0,75,1609	0/0:27,0:27:68.21:0,68,1128	0/0:21,0:21:48.05:0,48,875	0/0:42,0:42:58.09:0,58,1399	0/0:24,0:24:64.47:0,64,1306	0/0:23,0:23:44.76:0,45,841	0/0:18,0:18:54.15:0,54,1275	0/0:36,0:36:96.17:0,96,2201	0/0:26,0:26:62.99:0,63,1300	0/0:31,0:31:78.12:0,78,1768	0/0:6,0:6:10.21:0,10,123	1/1:3,2:5:6.02:97,6,0	0/0:18,0:17:34.31:0,34,581	0/0:41,0:41:99:0,111,2153	0/0:22,0:22:11.74:0,12,245	0/0:25,0:25:48.04:0,48,1180	0/0:29,0:29:72.10:0,72,1698	0/0:23,0:23:57.07:0,57,1248	0/0:34,0:34:85.25:0,85,1521	0/0:34,0:34:75.24:0,75,1651	0/0:34,0:34:53.03:0,53,796	0/0:8,0:8:16.94:0,17,196
chr10	57955950	.	AACGTATGTATGT	A	10631.71	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-2.381;DP=661;FS=7.540;HRun=0;HaplotypeScore=248.5384;InbreedingCoeff=0.9015;MQ=52.82;MQ0=16;MQRankSum=-5.714;QD=32.92;ReadPosRankSum=-1.704;VQSLOD=3.1093;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:17:2.97:0,3,20	1/1:6,1:6:9.02:254,9,0	0/0:34,0:14:31.05:0,31,330	0/0:28,0:15:40.04:0,40,356	0/0:30,0:30:22.89:0,23,295	0/0:25,0:25:57.03:0,57,1671	0/0:24,0:23:47.69:0,48,588	1/1:0,21:21:62.46:775,62,0	1/1:11,6:17:20.97:451,21,0	1/1:23,17:40:99:3004,120,0	1/1:16,5:22:38.99:576,39,0	0/0:16,0:16:23.89:0,24,291	0/0:22,0:22:50.70:0,51,1926	0/0:31,0:31:81.14:0,81,3508	1/1:14,9:23:31.88:643,32,0	0/0:23,0:23:54.04:0,54,1518	1/1:8,1:7:5.98:134,6,0	0/0:5,0:5:2.72:0,3,17	1/1:1,12:13:35.85:537,36,0	1/1:24,12:36:57.01:892,57,0	1/1:4,22:26:2.98:22,3,0	0/0:27,0:27:38.84:0,39,988	0/0:34,0:34:60.13:0,60,1830	0/0:21,0:21:35.84:0,36,936	1/1:23,9:32:42.03:725,42,0	1/1:26,7:33:92.92:1736,93,0	1/1:1,33:35:22.96:516,23,0	1/1:0,8:8:15.05:366,15,0
chr10	57955952	.	C	CGTAT	2976.37	PASS	AB=0.939;AC=21;AF=0.438;AN=48;BaseQRankSum=-4.148;DP=673;FS=6.554;HRun=0;HaplotypeScore=213.6979;InbreedingCoeff=0.2757;MQ=52.19;MQ0=17;MQRankSum=3.205;QD=7.87;ReadPosRankSum=-5.388;VQSLOD=0.8177;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:35,0:14:3:0,3,26	0/0:29,0:16:3.01:0,3,43	0/1:16,0:30:0.20:0,0,0	1/1:21,5:26:33.11:755,33,0	1/1:18,4:21:6.91:143,7,0	1/1:24,0:24:20.91:190,21,0	1/1:17,0:16:3.81:19,4,0	0/1:45,0:45:99:130,0,295	0/0:20,0:20:2.52:0,3,23	./.	0/0:20,0:22:33.06:0,33,432	0/0:31,0:31:48.15:0,48,724	0/0:24,0:23:4.73:0,5,43	1/1:15,7:21:27.09:619,27,0	0/0:9,0:7:2.60:0,3,10	1/1:5,0:5:3.01:31,3,0	0/0:14,0:13:5.41:0,5,58	0/1:36,0:36:0.04:0,0,3	./.	1/1:9,17:27:8.68:212,9,0	0/1:31,4:35:56.61:673,0,57	0/1:11,10:21:1.96:268,0,2	0/0:33,0:33:4.31:0,4,26	0/1:33,0:33:65.40:65,0,149	0/1:35,0:35:19.21:19,0,45	0/0:9,0:8:2.84:0,3,9
chr10	57955982	.	T	TC	730.34	PASS	AB=0.960;AC=13;AF=0.232;AN=56;BaseQRankSum=5.000;DP=715;FS=30.835;HRun=0;HaplotypeScore=246.8194;InbreedingCoeff=-0.0340;MQ=47.42;MQ0=16;MQRankSum=-0.519;QD=2.57;ReadPosRankSum=-2.702;VQSLOD=1.6069;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:15:0.91:3,1,0	1/1:9,2:10:5.88:96,6,0	0/0:34,0:10:29.83:0,30,384	0/0:35,0:13:34.63:0,35,428	0/0:29,2:31:9.02:0,9,132	0/0:30,0:30:52.57:0,53,543	0/0:12,0:11:14.98:0,15,160	0/0:42,0:40:47.89:0,48,1061	0/1:23,1:23:72.29:81,0,72	0/1:37,2:39:99:185,0,726	0/1:21,2:22:72.42:84,0,72	0/0:22,0:22:33.11:0,33,459	0/0:27,0:27:41.93:0,42,535	0/0:35,0:35:63.21:0,63,881	0/1:22,2:23:70.29:123,0,70	0/0:27,0:26:41.66:0,42,454	0/0:12,0:10:1.31:0,1,4	0/0:5,0:5:6.02:0,6,77	0/0:12,0:11:24.98:0,25,250	0/1:35,1:35:17.80:18,0,308	0/0:20,0:20:3.01:0,3,46	0/0:32,0:32:51.05:0,51,644	0/0:28,0:28:54.01:0,54,580	0/0:27,0:27:48.11:0,48,601	0/1:34,2:35:76.97:77,0,150	0/1:24,1:24:94.16:94,0,482	0/1:40,0:40:9.72:10,0,261	0/1:10,0:9:99:106,0,107
chr10	57955995	.	CATCTATCT	C	1577.98	PASS	AB=0.997;AC=18;AF=0.375;AN=48;BaseQRankSum=4.149;DP=716;FS=7.599;HRun=0;HaplotypeScore=289.8250;InbreedingCoeff=0.1192;MQ=48.60;MQ0=8;MQRankSum=-0.933;QD=4.36;ReadPosRankSum=-2.379;VQSLOD=1.0890;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:6,0:18:0:0,0,0	1/1:12,0:11:3.01:40,3,0	./.	./.	0/1:30,0:33:0.17:0,0,0	0/0:15,0:29:14.08:0,14,396	0/0:13,0:14:12.03:0,12,194	./.	0/1:22,0:21:38.78:39,0,40	0/1:41,0:41:99:371,0,124	0/0:29,0:28:2.73:0,3,17	0/0:26,0:26:51.18:0,51,1977	1/1:10,15:25:2.94:74,3,0	./.	0/0:24,0:23:5.37:0,5,49	0/1:29,0:28:11.90:47,0,12	0/1:15,0:14:0:0,0,0	0/0:2,0:7:7.88:0,8,92	0/1:9,0:9:17:73,0,17	0/1:39,0:38:36.81:37,0,38	1/1:17,0:17:2.62:55,3,0	0/0:33,0:33:47.84:0,48,1926	0/0:20,0:31:15.48:0,15,270	0/0:24,0:24:36.12:0,36,1452	0/1:38,0:37:19.98:59,0,20	0/1:26,0:25:51.81:592,0,52	1/1:37,0:37:18.53:331,19,0	0/0:10,0:9:9.03:0,9,123
chr10	57956031	.	TATCTATCTATCTATCA	T	1536.58	PASS	AB=1.000;AC=14;AF=0.250;AN=56;BaseQRankSum=-1.063;DP=673;FS=0.000;HRun=0;HaplotypeScore=286.2360;InbreedingCoeff=0.0223;MQ=52.05;MQ0=12;MQRankSum=2.071;QD=5.12;ReadPosRankSum=-4.368;VQSLOD=1.5364;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:25:78.66:135,0,79	1/1:2,12:13:8.88:158,9,0	0/0:17,0:11:32.99:0,33,325	0/0:14,0:5:12.49:0,12,127	0/1:38,0:38:3.26:231,0,3	0/0:25,0:25:29.27:0,29,961	0/0:19,0:18:38.85:0,39,918	1/1:26,0:22:35.94:306,36,0	0/0:27,0:26:8.52:0,9,147	0/1:33,0:32:99:458,0,172	0/0:33,0:31:3.01:0,3,54	0/0:27,0:27:74.56:0,75,3613	0/0:25,0:25:41.85:0,42,534	0/0:24,0:24:32.09:0,32,392	0/0:24,0:23:2.48:0,2,55	0/1:28,0:27:31.98:32,0,42	0/0:5,18:22:0.55:0,1,2	0/0:7,0:7:9.03:0,9,192	0/1:9,0:6:30.94:31,0,135	0/1:44,0:43:18.27:18,0,191	0/1:8,0:8:15.50:15,0,81	0/0:29,0:29:75.19:0,75,3846	0/0:23,0:23:21.52:0,22,729	0/0:20,0:20:45.13:0,45,2602	0/0:36,0:35:7.84:0,8,125	0/1:27,0:26:81.15:81,0,641	0/1:39,0:38:99:201,0,430	0/1:8,0:7:30.04:30,0,291
chr10	57956035	.	TATCTATCTATCA	T	2964.73	PASS	AB=0.900;AC=23;AF=0.411;AN=56;BaseQRankSum=2.901;DP=670;FS=0.444;HRun=0;HaplotypeScore=246.7784;InbreedingCoeff=0.3484;MQ=54.01;MQ0=10;MQRankSum=1.403;QD=7.47;ReadPosRankSum=-0.759;VQSLOD=1.8994;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:27:34.85:182,0,35	1/1:14,0:13:8.88:111,9,0	0/0:18,0:13:39:0,39,388	0/0:13,0:7:15.50:0,16,166	1/1:35,0:35:20.64:252,21,0	0/0:24,0:24:35.27:0,35,835	0/0:19,0:18:41.93:0,42,758	1/1:23,0:19:41.95:362,42,0	0/0:26,0:25:1.22:0,1,4	1/1:11,23:33:66.08:1307,66,0	0/1:4,28:30:0:0,0,1	0/0:27,0:27:74.56:0,75,2968	0/0:26,0:26:43.65:0,44,442	0/0:26,0:26:37.91:0,38,307	0/1:7,17:23:0.17:0,0,0	1/1:4,22:25:5.93:129,6,0	0/0:20,0:20:0.89:0,1,2	0/1:8,0:8:9.23:9,0,105	0/1:10,0:7:18.64:70,0,19	0/1:45,1:45:33.32:33,0,81	1/1:10,0:10:9.57:64,10,0	0/0:31,0:31:84.18:0,84,3174	0/0:22,0:22:21.51:0,22,569	0/0:20,0:21:48.12:0,48,2163	0/1:35,0:34:6.86:7,0,30	1/1:27,0:26:0.38:274,0,0	0/1:37,0:36:7.55:282,0,8	0/1:8,0:7:55.93:56,0,174
chr10	57956039	.	TATCTATCA	T	4842.10	PASS	AB=1.000;AC=29;AF=0.537;AN=54;BaseQRankSum=4.144;DP=658;FS=0.887;HRun=0;HaplotypeScore=203.1799;InbreedingCoeff=0.5860;MQ=55.43;MQ0=10;MQRankSum=1.415;QD=11.64;ReadPosRankSum=0.302;VQSLOD=3.3882;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:25:12.93:174,0,13	1/1:14,0:13:8.88:83,9,0	0/0:18,0:13:39:0,39,388	0/0:12,0:8:12.14:0,12,161	1/1:35,0:35:41.50:315,41,0	0/0:24,0:24:35.09:0,35,630	0/0:16,0:15:41.81:0,42,581	1/1:19,0:15:41.95:362,42,0	1/1:4,21:24:2.77:65,3,0	1/1:30,0:29:63.53:819,64,0	0/1:31,0:29:0.19:0,0,1	0/0:29,0:29:80.55:0,81,2312	0/1:27,0:27:5.63:6,0,333	0/0:26,0:26:40.72:0,41,310	./.	1/1:24,0:23:2.71:62,3,0	0/0:20,0:20:0.89:0,1,2	0/1:8,0:8:28.86:29,0,40	1/1:12,1:10:27:312,27,0	1/1:5,40:44:14.82:140,15,0	1/1:11,0:11:14.87:229,15,0	0/0:34,0:34:96.14:0,96,2447	0/0:19,0:19:21.50:0,22,410	0/0:21,0:21:51.12:0,51,1650	1/1:11,24:34:5.95:100,6,0	1/1:5,23:27:66.09:1172,66,0	1/1:30,7:36:68.97:918,69,0	0/1:8,0:7:43.71:56,0,44
chr10	57956673	.	GA	G	486.74	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.490;DP=487;FS=6.025;HRun=7;HaplotypeScore=44.6859;InbreedingCoeff=0.9908;MQ=79.85;MQ0=0;MQRankSum=-1.073;QD=24.34;ReadPosRankSum=1.303;VQSLOD=3.9030;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:39.11:0,39,478	0/0:7,0:7:21.07:0,21,264	0/0:12,0:12:30.07:0,30,350	0/0:12,0:12:33.04:0,33,368	0/0:31,0:31:84.27:0,84,1057	0/0:20,0:20:57.18:0,57,717	0/0:11,0:11:30.10:0,30,377	0/0:24,0:24:63.20:0,63,793	0/0:18,0:18:51.16:0,51,641	0/0:20,0:20:57.17:0,57,706	0/0:16,0:16:48.14:0,48,589	0/0:11,0:11:30.10:0,30,377	0/0:17,0:17:42.13:0,42,512	0/0:21,0:21:57.16:0,57,692	0/0:14,0:14:42.11:0,42,502	1/1:1,19:20:57.13:582,57,0	0/0:18,0:18:48.15:0,48,604	0/0:9,0:9:24.08:0,24,302	0/0:16,0:16:30.10:0,30,377	0/0:30,0:30:87.27:0,87,1081	0/0:15,0:15:45.13:0,45,552	0/0:11,0:11:30.10:0,30,377	0/0:22,0:22:63.20:0,63,786	0/0:14,0:14:36.12:0,36,453	0/0:15,0:15:39.10:0,39,476	0/0:25,0:25:75.23:0,75,932	0/0:28,0:28:60.19:0,60,755	0/0:13,0:13:36.12:0,36,453
chr10	57956870	.	TG	T	1928.46	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=12.274;DP=703;FS=1.709;HRun=1;HaplotypeScore=86.5035;InbreedingCoeff=0.9985;MQ=86.22;MQ0=0;MQRankSum=-5.881;QD=33.25;ReadPosRankSum=1.952;VQSLOD=3.6097;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,13:13:39.13:503,39,0	0/0:9,0:9:27.09:0,27,432	0/0:29,0:29:84.28:0,84,1317	0/0:18,0:18:54.18:0,54,807	1/1:2,34:36:96.26:1220,96,0	0/0:29,0:29:87.30:0,87,1383	0/0:20,0:20:60.20:0,60,959	0/0:29,0:29:87.29:0,87,1363	0/0:32,0:32:96.31:0,96,1510	0/0:35,0:35:99:0,102,1611	0/0:21,0:21:63.21:0,63,1004	0/0:18,0:18:51.16:0,51,789	0/0:38,0:38:99:0,114,1814	0/0:32,0:32:96.33:0,96,1532	0/0:32,0:32:96.33:0,96,1533	0/0:30,0:30:90.29:0,90,1408	0/0:13,0:13:39.13:0,39,607	1/1:0,9:9:27.09:348,27,0	0/0:25,0:25:75.26:0,75,1189	0/0:23,0:23:69.20:0,69,1053	0/0:40,0:40:99:0,120,1892	0/0:25,0:25:69.24:0,69,1103	0/0:23,0:23:69.23:0,69,1092	0/0:15,0:15:42.08:0,42,619	0/0:36,0:36:99:0,108,1717	0/0:34,1:35:66.59:0,67,1591	0/0:30,0:29:90.28:0,90,1406	0/0:8,0:8:24.08:0,24,384
chr10	57959099	.	TGAGA	T	101.24	PASS	AB=1.000;AC=11;AF=0.289;AN=38;BaseQRankSum=2.760;DP=492;FS=11.256;HRun=0;HaplotypeScore=86.1265;InbreedingCoeff=0.3752;MQ=64.98;MQ0=11;MQRankSum=-0.866;QD=0.97;ReadPosRankSum=-0.064;VQSLOD=0.9418;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	0/0:42,0:29:0:0,0,0	1/1:10,0:10:0.47:1,0,0	0/0:10,0:10:3.01:0,3,67	0/0:22,0:22:12.04:0,12,175	0/0:26,0:25:6.47:0,6,65	1/1:11,3:13:6.02:92,6,0	./.	./.	0/0:12,0:12:9.92:0,10,177	0/0:22,0:20:9.50:0,10,160	0/0:18,0:17:6.49:0,6,105	1/1:20,7:26:3.48:47,3,0	0/0:18,0:17:5.85:0,6,126	0/1:12,0:12:17.48:38,0,17	0/0:9,0:9:1.25:0,1,3	./.	./.	1/1:21,0:20:0.47:1,0,0	0/0:17,0:17:3.01:0,3,42	0/0:14,0:14:6.02:0,6,105	0/0:24,0:23:32.83:0,33,561	./.	0/0:21,0:20:2.37:0,2,8	1/1:20,0:20:3:28,3,0	./.
chr10	57959907	.	C	CTCTCTG	8890.93	PASS	AB=0.600;AC=29;AF=0.518;AN=56;BaseQRankSum=-7.776;DP=769;FS=2.904;HRun=0;HaplotypeScore=150.6696;InbreedingCoeff=0.8759;MQ=71.80;MQ0=9;MQRankSum=-6.258;QD=23.09;ReadPosRankSum=-3.701;VQSLOD=4.2566;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,107,1899	1/1:3,7:10:2.91:98,3,0	0/0:31,0:22:3.01:0,3,63	0/0:50,0:35:11.50:0,12,163	0/0:30,0:30:57.17:0,57,1010	0/0:20,0:20:39.13:0,39,720	0/0:27,0:27:48.12:0,48,747	1/1:28,0:28:51:575,51,0	1/1:8,17:25:15.05:491,15,0	1/1:7,17:30:63.13:1152,63,0	1/1:9,14:24:18.06:344,18,0	0/0:24,0:24:57.20:0,57,1119	0/0:19,0:20:54.16:0,54,1026	0/0:24,0:24:66.14:0,66,1169	1/1:5,23:30:18.06:591,18,0	1/1:4,17:21:24.08:668,24,0	0/1:14,26:42:5.99:188,0,6	0/0:23,0:22:38.31:0,38,626	1/1:9,8:18:24:395,24,0	1/1:9,22:32:44.74:973,45,0	1/1:26,0:26:27.02:334,27,0	0/0:28,0:27:66.21:0,66,1213	0/0:24,0:24:36.09:0,36,637	0/0:29,0:29:47.98:0,48,801	1/1:7,15:25:21.07:507,21,0	1/1:6,26:33:78.22:1597,78,0	1/1:5,18:25:21.07:682,21,0	1/1:6,10:16:9.03:296,9,0
chr10	57960502	.	AT	A	7937.52	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=8.753;DP=459;FS=0.440;HRun=9;HaplotypeScore=52.7598;InbreedingCoeff=0.9550;MQ=67.52;MQ0=1;MQRankSum=0.559;QD=22.94;ReadPosRankSum=0.078;VQSLOD=5.4153;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,12:16:35.94:319,36,0	1/1:2,12:14:36.02:329,36,0	0/0:9,0:7:11.44:0,11,99	0/0:6,0:6:2.03:0,2,10	1/1:3,29:32:83.96:759,84,0	0/0:18,0:18:51.15:0,51,589	0/0:8,0:8:15.04:0,15,173	1/1:6,19:25:53.96:480,54,0	1/1:2,7:9:18.01:165,18,0	1/1:1,17:18:51.03:467,51,0	1/1:1,17:18:48.02:439,48,0	0/0:19,0:19:23.82:0,24,527	0/0:11,0:11:30.09:0,30,341	0/0:8,0:8:21.06:0,21,242	1/1:3,13:16:36.01:329,36,0	1/1:4,12:16:33.01:302,33,0	1/1:1,22:22:57.03:522,57,0	1/1:0,10:10:27.01:247,27,0	1/1:0,19:19:54.02:488,54,0	1/1:3,32:35:89.95:814,90,0	1/1:1,6:7:15.01:137,15,0	0/0:7,0:7:18.05:0,18,208	0/0:20,1:21:29.71:0,30,596	0/0:6,0:6:15.04:0,15,173	1/1:4,27:31:81.04:741,81,0	1/1:0,17:17:51.03:467,51,0	1/1:2,25:27:72.03:659,72,0	1/1:1,12:13:30.02:275,30,0
chr10	57960853	.	T	TA	7977.95	PASS	AB=0.600;AC=29;AF=0.518;AN=56;BaseQRankSum=-15.756;DP=579;FS=3.940;HRun=9;HaplotypeScore=55.0768;InbreedingCoeff=0.9238;MQ=76.64;MQ0=0;MQRankSum=-1.770;QD=24.40;ReadPosRankSum=0.559;VQSLOD=5.7098;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:77.92:0,78,664	0/1:2,4:6:8.15:103,0,8	0/0:14,0:13:26.75:0,27,218	0/0:15,0:15:20.52:0,21,171	0/0:36,0:37:97.92:0,98,822	0/0:23,0:24:65.02:0,65,553	0/0:14,1:15:8.80:0,9,302	1/1:10,19:29:57.14:622,57,0	1/1:1,20:21:45.12:498,45,0	1/1:4,26:30:81.05:853,81,0	1/1:2,24:26:69.12:748,69,0	0/0:16,0:16:44.99:0,45,391	0/0:25,0:25:65.98:0,66,573	0/0:22,0:23:62.01:0,62,523	1/1:2,27:29:63.56:815,64,0	1/1:7,19:26:19.07:439,19,0	1/1:4,23:27:54.15:597,54,0	0/0:14,0:14:32.96:0,33,281	1/1:3,13:16:39.08:413,39,0	1/1:4,17:21:27.99:509,28,0	1/1:1,20:21:38.28:609,38,0	0/0:14,0:14:38.99:0,39,339	0/0:15,0:15:38.98:0,39,336	0/0:11,0:11:32.99:0,33,286	1/1:6,15:21:39.11:431,39,0	1/1:2,23:25:69.14:736,69,0	1/1:7,15:22:13.06:372,13,0	1/1:0,7:7:21.06:232,21,0
chr10	57963030	.	G	GA	10873.28	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=12.561;DP=518;FS=0.727;HRun=0;HaplotypeScore=66.2502;InbreedingCoeff=0.9884;MQ=59.05;MQ0=9;MQRankSum=0.337;QD=43.49;ReadPosRankSum=0.354;VQSLOD=5.2159;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:40:99:0,108,1479	1/1:0,10:10:27.09:431,27,0	0/0:11,0:5:9.03:0,9,126	0/0:21,0:9:27.09:0,27,377	0/0:15,0:15:45.15:0,45,629	0/0:17,0:17:48.13:0,48,636	0/0:26,0:26:72.24:0,72,1005	1/1:1,28:29:84.28:1318,84,0	1/1:0,20:20:51.17:815,51,0	1/1:2,20:22:66.22:1047,66,0	1/1:0,11:11:30.10:479,30,0	0/0:15,0:15:45.15:0,45,629	0/0:12,0:12:36.12:0,36,500	0/0:15,0:15:45.14:0,45,613	1/1:0,19:18:48.16:768,48,0	0/0:18,0:18:51.16:0,51,698	1/1:0,20:20:54.18:863,54,0	0/0:25,0:25:75.25:0,75,1049	1/1:1,17:16:48.14:742,48,0	1/1:0,14:14:39.13:623,39,0	1/1:2,36:38:99:1679,105,0	0/0:11,0:11:33.10:0,33,443	0/0:16,0:16:48.15:0,48,654	0/0:24,0:24:69.23:0,69,965	1/1:0,7:7:18.06:288,18,0	1/1:0,14:14:39.01:624,39,0	1/1:0,23:23:60.20:959,60,0	1/1:0,5:5:15.05:240,15,0
chr10	57963284	.	AT	A	4386.45	PASS	AB=0.976;AC=33;AF=0.589;AN=56;BaseQRankSum=4.109;DP=355;FS=1.212;HRun=9;HaplotypeScore=78.0713;InbreedingCoeff=0.8537;MQ=72.70;MQ0=2;MQRankSum=-6.241;QD=19.67;ReadPosRankSum=-0.120;VQSLOD=5.1045;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,12:13:38.88:333,39,0	1/1:0,6:6:17.98:157,18,0	0/1:39,0:20:8.09:8,0,123	0/0:52,1:25:5.14:0,5,110	1/1:6,22:28:34.42:568,34,0	0/0:9,0:9:27.07:0,27,302	0/0:6,0:6:15.04:0,15,173	1/1:11,19:30:77.86:673,78,0	1/1:1,2:3:8.99:77,9,0	1/1:2,14:16:48.02:434,48,0	1/1:1,14:15:42.02:384,42,0	0/0:7,0:7:21.06:0,21,242	0/0:7,0:7:18.05:0,18,208	0/0:6,0:6:18.05:0,18,208	1/1:0,3:3:9:82,9,0	0/0:9,0:9:24.07:0,24,277	1/1:2,3:5:9:82,9,0	0/0:12,0:10:33.05:0,33,357	1/1:1,8:9:24.01:220,24,0	1/1:1,9:10:29.97:266,30,0	1/1:0,3:3:8.96:74,9,0	0/0:3,0:3:9.03:0,9,104	0/0:12,0:12:36.11:0,36,415	0/0:3,0:3:9.03:0,9,104	1/1:0,18:18:53.94:477,54,0	1/1:2,6:8:20.96:184,21,0	1/1:5,7:12:32.97:286,33,0	1/1:1,3:4:9:82,9,0
chr10	57963304	.	TA	T	473.58	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=0.654;DP=461;FS=6.131;HRun=4;HaplotypeScore=109.3851;InbreedingCoeff=0.7599;MQ=66.95;MQ0=9;MQRankSum=1.163;QD=19.73;ReadPosRankSum=1.032;VQSLOD=2.6101;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:28.40:0,28,159	0/0:8,0:8:21.52:0,22,105	0/0:77,0:21:13.76:0,14,222	0/0:81,0:30:8.11:0,8,205	0/0:25,0:25:60.45:0,60,314	0/0:8,0:8:22.62:0,23,291	0/0:7,0:7:21.05:0,21,257	0/0:28,0:28:72.02:0,72,463	0/0:3,0:3:8.61:0,9,47	0/0:22,0:21:55.36:0,55,302	0/0:17,0:17:47.21:0,47,248	0/0:9,0:9:23.43:0,23,279	0/0:7,0:7:21.07:0,21,287	0/0:9,0:9:26.62:0,27,303	0/0:4,0:4:8.41:0,8,45	1/1:0,9:9:27.05:264,27,0	0/0:9,0:9:17.13:0,17,97	1/1:5,10:14:38.86:330,39,0	0/0:13,0:13:28.90:0,29,165	0/0:13,0:13:33.13:0,33,155	0/0:5,0:5:5.92:0,6,41	0/0:3,0:3:9.03:0,9,124	0/0:21,0:21:61.74:0,62,811	0/0:2,0:2:6.02:0,6,82	0/0:20,0:20:51.25:0,51,300	0/0:10,0:10:29.18:0,29,190	0/0:20,0:20:57.85:0,58,334	0/0:3,0:3:8.70:0,9,52
chr10	57963318	.	TTTA	T	7889.02	PASS	AB=1.000;AC=33;AF=0.589;AN=56;BaseQRankSum=6.254;DP=497;FS=1.684;HRun=0;HaplotypeScore=95.5969;InbreedingCoeff=0.8781;MQ=69.19;MQ0=12;MQRankSum=-6.025;QD=31.18;ReadPosRankSum=2.368;VQSLOD=5.1257;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:11:13.81:100,14,0	1/1:2,7:9:24.06:338,24,0	0/0:79,0:22:20.40:0,20,505	0/0:82,0:28:36.68:0,37,356	0/1:25,0:25:3.90:74,0,4	0/0:10,0:10:30.07:0,30,554	0/0:9,0:9:27.06:0,27,484	1/1:3,23:26:75.06:960,75,0	1/1:0,7:7:12.04:190,12,0	1/1:2,18:20:60.17:884,60,0	1/1:1,16:17:47.60:672,48,0	0/0:10,0:10:30.08:0,30,544	0/0:9,0:9:27.07:0,27,494	0/0:8,0:8:24.08:0,24,541	1/1:1,8:9:9.02:123,9,0	1/1:3,9:12:36.12:511,36,0	1/1:1,10:11:21.07:321,21,0	1/1:1,14:15:33.56:454,34,0	1/1:3,11:14:40.84:488,41,0	1/1:0,18:18:53.93:670,54,0	0/0:0,4:4:0:0,0,0	0/0:4,0:4:9.03:0,9,203	0/0:24,0:24:72.20:0,72,1454	0/0:5,0:5:15.02:0,15,222	1/1:1,17:18:42.14:661,42,0	1/1:2,11:13:39.03:464,39,0	1/1:1,24:25:57.19:885,57,0	1/1:0,2:2:6.02:95,6,0
chr10	57963319	.	TTA	T	5274.15	PASS	AC=34;AF=0.630;AN=54;BaseQRankSum=8.789;DP=494;FS=4.032;HRun=0;HaplotypeScore=97.6442;InbreedingCoeff=0.9426;MQ=68.59;MQ0=12;MQRankSum=-6.640;QD=20.93;ReadPosRankSum=1.972;VQSLOD=5.3195;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,6:12:35.80:376,36,0	1/1:8,0:8:20.30:145,20,0	0/0:76,0:22:6.08:0,6,350	0/0:80,0:26:12.83:0,13,190	1/1:3,21:24:61.08:689,61,0	0/0:11,0:11:32.94:0,33,465	0/0:9,0:9:27.06:0,27,400	1/1:26,0:26:73.14:532,73,0	1/1:7,0:7:11.97:97,12,0	1/1:21,0:20:59.13:441,59,0	1/1:16,1:17:47.56:368,48,0	0/0:10,0:10:30.06:0,30,427	0/0:9,0:9:27.05:0,27,392	0/0:8,0:8:24.08:0,24,430	1/1:9,0:9:8.96:68,9,0	1/1:12,0:12:36.02:335,36,0	1/1:11,0:11:20.92:165,21,0	1/1:15,0:14:35.97:321,36,0	1/1:14,0:14:40.04:288,40,0	1/1:18,0:18:53.43:383,53,0	./.	0/0:5,0:5:12.03:0,12,186	0/0:24,0:24:72.07:0,72,1158	0/0:6,0:6:17.99:0,18,202	1/1:18,0:18:41.86:329,42,0	1/1:13,0:13:37.63:272,38,0	1/1:25,0:25:56.29:421,56,0	1/1:2,0:2:5.98:46,6,0
chr10	57966002	.	C	CGTAA	28127.82	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-13.596;DP=665;FS=5.318;HRun=0;HaplotypeScore=86.6016;InbreedingCoeff=0.9952;MQ=90.49;MQ0=8;MQRankSum=-12.193;QD=64.37;ReadPosRankSum=2.240;VQSLOD=6.5847;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,26:28:66.18:1743,66,0	1/1:0,10:11:27.09:739,27,0	0/0:28,0:28:78.19:0,78,1410	0/0:30,0:30:71.34:0,71,1308	1/1:3,24:28:78.19:1998,78,0	0/0:21,0:21:60.21:0,60,1150	0/0:19,0:19:54.17:0,54,1013	1/1:5,23:29:81.25:1995,81,0	1/1:2,20:21:48.16:1302,48,0	1/1:3,28:31:87.29:2324,87,0	1/1:2,27:27:78.16:2003,78,0	0/0:29,0:29:81.26:0,81,1533	0/0:30,0:30:87.14:0,87,1591	0/0:17,0:17:51.16:0,51,953	1/1:1,25:26:57.15:1497,57,0	1/1:0,21:21:57.20:1561,57,0	1/1:1,20:19:48.16:1311,48,0	1/1:0,5:5:12.04:328,12,0	1/1:3,22:25:69.20:1778,69,0	1/1:3,30:33:84.14:2099,84,0	1/1:1,24:25:51.18:1395,51,0	0/0:21,0:21:63.17:0,63,1182	0/0:19,0:19:54.19:0,54,1039	0/0:14,0:14:39.13:0,39,755	1/1:0,27:28:66.23:1805,66,0	1/1:4,20:25:69.23:1805,69,0	1/1:2,25:28:60.12:1550,60,0	1/1:2,12:14:33.11:896,33,0
chr10	57967314	.	GA	G	212.16	PASS	AC=4;AF=0.074;AN=54;BaseQRankSum=-2.543;DP=255;FS=4.571;HRun=1;HaplotypeScore=36.8462;InbreedingCoeff=0.5426;MQ=53.66;MQ0=22;MQRankSum=1.487;QD=19.29;ReadPosRankSum=-0.450;VQSLOD=3.5295;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,6:6:13.44:200,13,0	0/0:3,0:2:6.02:0,6,76	0/0:32,0:5:8.88:0,9,70	0/0:51,0:12:26.95:0,27,284	1/1:0,4:4:9.03:120,9,0	0/0:12,0:12:29.78:0,30,393	0/0:8,0:8:15.05:0,15,209	0/0:19,0:16:48.09:0,48,638	0/0:9,0:9:12.01:0,12,125	0/0:8,0:6:15.02:0,15,186	0/0:5,0:5:9.03:0,9,134	0/0:2,0:2:6.02:0,6,75	0/0:7,0:7:11.98:0,12,127	0/0:4,0:4:8.98:0,9,121	0/0:7,0:7:12.02:0,12,151	0/0:7,0:7:15.66:0,16,149	0/0:3,0:4:6.49:0,6,68	0/0:2,0:2:6.02:0,6,77	0/0:12,0:12:30.98:0,31,405	0/0:8,0:7:8.21:0,8,84	0/0:5,0:4:6.02:0,6,75	0/0:7,0:7:11.77:0,12,150	0/0:4,0:4:6.02:0,6,75	0/0:4,0:4:9.03:0,9,124	./.	0/0:10,0:10:27.52:0,28,329	0/0:3,0:3:6.02:0,6,76	0/0:6,0:4:12.04:0,12,152
chr10	57967324	.	GAA	G	1620.99	PASS	AB=1.000;AC=27;AF=0.500;AN=54;BaseQRankSum=-3.618;DP=289;FS=0.725;HRun=3;HaplotypeScore=41.9882;InbreedingCoeff=0.7001;MQ=64.41;MQ0=18;MQRankSum=-2.411;QD=13.07;ReadPosRankSum=-2.796;VQSLOD=-0.4706;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:7:17.39:0,17,160	1/1:4,0:3:8.90:66,9,0	0/0:37,0:9:8.41:0,8,87	0/0:53,0:17:6.20:0,6,194	0/0:6,0:6:17.97:0,18,153	0/0:13,0:13:32.57:0,33,318	0/0:9,0:9:15.60:0,16,133	1/1:16,0:14:32.30:228,32,0	1/1:11,0:11:17.82:139,18,0	1/1:9,0:7:19.18:168,19,0	0/1:9,0:9:14.70:103,0,15	0/0:2,0:2:5.96:0,6,45	0/1:9,0:9:2.86:3,0,94	0/0:5,0:5:12.03:0,12,170	1/1:8,0:8:14.98:125,15,0	0/0:10,0:10:11.70:0,12,156	1/1:5,0:5:5.98:47,6,0	0/1:2,0:2:14:14,0,15	1/1:12,0:12:29.19:195,29,0	1/1:11,0:11:21.86:177,22,0	1/1:9,0:8:17.98:150,18,0	0/0:7,0:7:12.01:0,12,108	0/0:4,0:4:6:0,6,54	0/0:6,0:6:14.99:0,15,156	./.	1/1:6,4:10:27.27:226,27,0	1/1:5,0:5:14.80:105,15,0	1/1:4,0:4:11.86:80,12,0
chr10	57970161	.	G	GT	709.02	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=-5.350;DP=502;FS=0.706;HRun=10;HaplotypeScore=49.9139;InbreedingCoeff=0.8281;MQ=73.82;MQ0=0;MQRankSum=-1.158;QD=14.47;ReadPosRankSum=-2.531;VQSLOD=2.9211;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:38.92:0,39,320	1/1:0,4:4:12.03:128,12,0	0/0:15,0:12:17.58:0,18,128	0/0:12,0:11:7.73:0,8,74	0/0:34,0:34:89.85:0,90,732	0/0:26,0:26:62.83:0,63,508	0/1:10,0:10:4.97:5,0,170	1/1:7,17:24:45.07:462,45,0	0/0:16,0:16:47.92:0,48,390	0/0:30,0:31:82.93:0,83,671	0/0:21,0:21:50.87:0,51,410	0/0:9,0:9:20.96:0,21,172	0/0:17,0:17:44.92:0,45,366	0/0:21,0:21:53.93:0,54,443	0/0:17,0:17:41.91:0,42,340	0/0:14,0:14:35.93:0,36,292	1/1:1,10:11:24.06:256,24,0	0/0:6,0:6:17.98:0,18,148	0/0:23,0:23:59.66:0,60,478	0/0:20,0:20:56.88:0,57,459	0/0:9,0:9:23.97:0,24,197	0/0:23,0:23:62.91:0,63,515	0/0:24,0:24:53.92:0,54,443	0/0:6,0:6:14.98:0,15,123	0/0:20,0:20:53.91:0,54,438	0/0:25,0:25:39.90:0,40,476	0/0:34,0:34:83.85:0,84,683	0/0:13,0:13:38.96:0,39,320
chr10	57970882	.	G	GT	1505.65	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-9.504;DP=607;FS=8.990;HRun=7;HaplotypeScore=57.5626;InbreedingCoeff=0.9883;MQ=78.11;MQ0=0;MQRankSum=0.384;QD=28.41;ReadPosRankSum=-2.939;VQSLOD=2.9148;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:87.06:0,87,818	1/1:2,10:12:30.09:355,30,0	0/0:11,0:11:20.77:0,21,186	0/0:16,0:16:25.75:0,26,217	0/0:36,0:36:99:0,99,956	0/0:23,0:23:63.07:0,63,596	0/0:17,0:17:42.06:0,42,405	1/1:4,29:33:87.25:1040,87,0	0/0:23,0:23:66.11:0,66,637	0/0:19,0:19:51.08:0,51,492	0/0:18,0:18:45.07:0,45,434	0/0:20,0:20:54.08:0,54,521	0/0:16,0:16:13.46:0,13,322	0/0:21,0:21:63.04:0,63,593	0/0:20,0:20:51.08:0,51,492	0/0:27,0:27:66.08:0,66,632	1/1:1,7:8:21.06:254,21,0	0/0:19,0:19:48.08:0,48,463	0/0:17,0:17:51.07:0,51,489	0/0:36,0:36:96.15:0,96,927	0/0:21,0:21:60.08:0,60,574	0/0:24,0:24:72.12:0,72,695	0/0:18,0:18:48.06:0,48,457	0/0:19,0:19:51.07:0,51,493	0/0:22,0:22:57.09:0,57,550	0/0:28,0:28:72.11:0,72,695	0/0:33,0:33:87.14:0,87,840	0/0:19,0:19:51.08:0,51,491
chr10	57971125	.	C	CA	1368.43	PASS	AB=0.874;AC=33;AF=0.589;AN=56;BaseQRankSum=6.215;DP=558;FS=2.733;HRun=15;HaplotypeScore=89.7433;InbreedingCoeff=0.6293;MQ=53.33;MQ0=3;MQRankSum=-3.074;QD=3.93;ReadPosRankSum=-3.950;VQSLOD=0.3287;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:36:47.78:0,48,260	1/1:1,7:9:20.82:165,21,0	1/1:5,0:2:2.04:6,2,0	0/1:8,0:7:8.85:9,0,18	0/0:29,0:29:2.88:0,3,123	0/1:13,1:13:13.64:14,0,42	0/0:15,0:16:28.31:0,28,166	0/1:10,8:20:10.01:150,0,10	1/1:14,0:14:8.43:48,8,0	1/1:13,0:27:28.04:162,28,0	1/1:17,0:29:29.97:147,30,0	0/0:17,3:20:26.21:0,26,160	0/0:16,0:16:13.57:0,14,78	0/0:11,0:11:13.84:0,14,75	1/1:8,0:25:12.77:64,13,0	1/1:12,13:25:1.06:172,1,0	1/1:8,14:23:17.15:170,17,0	0/0:16,0:18:10.88:0,11,117	1/1:7,1:20:18.98:100,19,0	1/1:6,0:29:24.37:126,24,0	1/1:9,0:9:7.47:36,7,0	0/0:17,0:20:18.53:0,19,101	0/0:25,0:26:36.20:0,36,217	0/0:15,0:17:23.26:0,23,127	1/1:5,0:19:8.64:47,9,0	1/1:6,0:25:18.37:84,18,0	1/1:26,0:26:2.05:38,2,0	1/1:2,0:15:6.19:31,6,0
chr10	57971670	.	AAT	A	1541.01	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=7.173;DP=424;FS=3.273;HRun=0;HaplotypeScore=51.0270;InbreedingCoeff=0.9568;MQ=70.67;MQ0=0;MQRankSum=-1.973;QD=35.84;ReadPosRankSum=-1.795;VQSLOD=4.9992;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:75.22:0,75,1337	1/1:0,6:6:18.06:265,18,0	0/0:16,0:16:44.83:0,45,668	0/0:12,0:12:33.11:0,33,618	0/0:13,0:13:33.10:0,33,585	0/0:8,0:8:24.07:0,24,417	0/0:15,0:15:45.15:0,45,831	1/1:1,24:25:69.20:976,69,0	0/0:14,0:14:39.13:0,39,702	0/0:18,0:18:45.15:0,45,824	0/0:6,0:6:18.06:0,18,334	0/0:22,0:22:66.20:0,66,1200	0/0:13,0:13:39.12:0,39,686	0/0:17,0:17:42.14:0,42,779	0/0:13,0:13:39.13:0,39,677	0/0:15,0:15:42.14:0,42,786	1/1:1,11:12:30.10:442,30,0	0/0:15,0:15:45.14:0,45,809	0/0:20,0:20:60.16:0,60,1000	0/0:13,0:13:33.10:0,33,586	0/0:19,0:19:57.20:0,57,1061	0/0:13,0:13:39.13:0,39,729	0/0:18,0:18:51.17:0,51,954	0/0:19,0:19:48.16:0,48,897	0/0:15,0:15:36.12:0,36,674	0/0:19,0:19:51.17:0,51,951	0/0:19,0:19:51.17:0,51,937	0/0:2,0:2:6.02:0,6,112
chr10	57972334	.	G	GGCTCCTGA	786.25	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-3.931;DP=672;FS=0.000;HRun=0;HaplotypeScore=184.0371;InbreedingCoeff=0.9617;MQ=63.89;MQ0=0;MQRankSum=-4.527;QD=49.14;ReadPosRankSum=1.925;VQSLOD=3.2004;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,117,2827	0/0:11,0:11:30.10:0,30,774	0/0:27,0:25:12.02:0,12,235	0/0:27,0:22:30.09:0,30,630	0/0:27,0:27:63.17:0,63,1404	0/0:26,0:26:60.20:0,60,1503	0/0:25,0:25:63.22:0,63,1631	0/0:26,0:26:27.07:0,27,562	0/0:27,0:27:72.25:0,72,1849	0/0:20,0:20:36.12:0,36,842	0/0:28,0:28:48.16:0,48,1242	0/0:17,0:17:36.11:0,36,876	0/0:16,0:16:42.13:0,42,1003	0/0:19,0:19:42.14:0,42,1002	0/0:24,0:24:51.16:0,51,1266	0/0:24,0:24:54.15:0,54,1221	0/0:33,0:33:75.24:0,75,1861	1/1:8,8:16:21.07:878,21,0	0/0:26,0:26:57.20:0,57,1342	0/0:28,0:28:60.21:0,60,1489	0/0:37,0:36:66.20:0,66,1529	0/0:17,0:17:33.11:0,33,855	0/0:21,0:21:51.16:0,51,1151	0/0:21,0:21:42.13:0,42,1034	0/0:15,0:15:36.12:0,36,899	0/0:27,0:27:54.19:0,54,1292	0/0:29,0:29:78.24:0,78,1898	0/0:11,0:11:24.05:0,24,514
chr10	57977341	.	GT	G	401.78	PASS	AC=16;AF=0.889;AN=18;BaseQRankSum=-1.737;DP=33;FS=11.139;HRun=1;HaplotypeScore=5.1449;MQ=33.03;MQ0=4;MQRankSum=1.470;QD=22.32;ReadPosRankSum=1.470;VQSLOD=1.9477;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	0/0:1,0:1:2.92:0,3,17	./.	1/1:0,2:2:3.01:42,3,0	./.	./.	./.	1/1:0,2:2:6.02:83,6,0	./.	1/1:0,1:1:3.01:42,3,0	./.	./.	./.	1/1:0,2:2:2.98:21,3,0	./.	./.	1/1:0,3:1:3.01:42,3,0	./.	./.	./.	./.	./.	./.	1/1:0,1:1:3.01:42,3,0	1/1:0,3:1:3.01:42,3,0	1/1:0,4:4:12.04:168,12,0
chr10	57983140	.	T	TAA	1075.89	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=2.283;DP=377;FS=8.553;HRun=10;HaplotypeScore=45.7023;InbreedingCoeff=0.9700;MQ=57.30;MQ0=4;MQRankSum=1.856;QD=22.89;ReadPosRankSum=-1.759;VQSLOD=1.6052;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:7:21.01:0,21,204	1/1:1,6:8:17.55:232,18,0	0/0:9,0:8:23.85:0,24,215	0/0:7,0:6:13.51:0,14,112	0/0:28,0:29:68.85:0,69,675	0/0:13,0:13:30.03:0,30,305	0/0:9,0:9:21.04:0,21,213	1/1:10,8:15:24.08:358,24,0	0/0:12,0:12:30.04:0,30,305	0/0:17,0:16:45.10:0,45,457	0/0:17,0:17:45.06:0,45,451	0/0:9,0:9:24.04:0,24,244	0/0:8,0:9:14.44:0,14,115	0/0:12,0:12:27.03:0,27,274	0/0:8,0:8:21.04:0,21,214	0/0:11,0:11:24.02:0,24,244	1/1:2,19:21:42.14:627,42,0	0/0:11,0:11:27.03:0,27,274	0/0:12,0:10:21.02:0,21,213	0/0:15,0:15:33.07:0,33,336	0/0:9,0:10:20.73:0,21,187	0/0:10,0:10:24.04:0,24,237	0/0:15,0:15:42.04:0,42,410	0/0:12,0:12:36.06:0,36,359	0/0:14,0:14:35.88:0,36,359	0/0:22,0:22:38.99:0,39,383	0/0:16,0:16:39.05:0,39,389	0/0:22,0:23:26.70:0,27,424
chr10	57984218	.	A	AGTGGGCAGCC	31981.14	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-11.047;DP=591;FS=0.321;HRun=0;HaplotypeScore=148.7135;InbreedingCoeff=0.9936;MQ=63.01;MQ0=3;MQRankSum=-16.680;QD=117.58;ReadPosRankSum=-0.607;VQSLOD=5.3603;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:67.32:0,67,2977	1/1:1,6:7:18.06:986,18,0	0/0:22,0:22:38.86:0,39,1713	0/0:23,0:22:63.17:0,63,1896	0/0:40,0:40:99:0,108,3598	0/0:26,0:26:78.27:0,78,2646	0/0:16,0:16:48.16:0,48,1552	1/1:7,6:16:48.13:1791,48,0	1/1:8,14:24:66.23:3342,66,0	1/1:7,20:33:90.29:4326,90,0	1/1:7,19:25:54.19:2951,54,0	0/0:14,0:14:42.13:0,42,1386	0/0:18,0:18:48.16:0,48,1676	0/0:21,0:21:63.20:0,63,2065	1/1:4,18:25:66.23:3448,66,0	0/0:14,0:14:42.14:0,42,1448	1/1:5,6:10:24.08:1233,24,0	0/0:22,0:22:60.18:0,60,1814	1/1:1,5:8:24.07:995,24,0	1/1:5,18:22:48.12:2183,48,0	1/1:5,5:10:21.07:894,21,0	0/0:22,0:22:57.18:0,57,1722	0/0:29,0:29:78.27:0,78,2533	0/0:19,0:19:51.18:0,51,1736	1/1:5,16:21:54.19:2871,54,0	1/1:8,13:23:69.22:3344,69,0	1/1:2,14:21:57.20:2984,57,0	1/1:1,3:4:12.04:633,12,0
chr10	57989268	.	GGA	G	458.13	PASS	AB=0.922;AC=16;AF=0.400;AN=40;BaseQRankSum=0.024;DP=499;FS=6.570;HRun=0;HaplotypeScore=66.9481;InbreedingCoeff=-0.0892;MQ=57.81;MQ0=26;MQRankSum=0.822;QD=2.19;ReadPosRankSum=0.104;VQSLOD=0.5708;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:28:3:0,3,26	./.	./.	./.	1/1:20,0:20:2.88:32,3,0	0/0:15,0:15:5.99:0,6,49	0/0:12,3:15:2.99:0,3,23	./.	0/1:14,0:14:8.36:8,0,24	0/0:14,0:13:1.76:0,2,54	0/0:11,0:11:0.47:0,0,1	0/1:10,1:11:24.18:24,0,66	0/0:9,0:9:3.25:0,3,26	0/1:14,2:16:10.93:28,0,11	0/0:10,0:10:8.97:0,9,72	0/1:15,1:16:27.96:28,0,55	1/1:14,0:27:2.84:14,3,0	./.	0/1:18,1:18:19.89:20,0,49	./.	1/1:22,0:21:3.01:32,3,0	0/0:21,0:21:4.24:0,4,27	0/1:10,0:10:9.37:9,0,20	1/1:22,5:27:27:264,27,0	./.	0/1:14,5:19:20.89:117,0,21	0/1:6,0:6:4.62:5,0,18	./.
chr10	57989982	.	CCTATCTATCTAACTATCTATCTATCTAT	C	2671.48	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=0.778;DP=544;FS=2.712;HRun=0;HaplotypeScore=333.0934;InbreedingCoeff=0.9248;MQ=65.22;MQ0=5;MQRankSum=-2.184;QD=14.44;ReadPosRankSum=2.727;VQSLOD=1.4344;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:46.35:0,46,3023	0/0:14,0:14:39.09:0,39,1770	0/0:28,0:18:29.79:0,30,312	0/0:11,0:10:20.97:0,21,196	0/0:21,0:21:45.07:0,45,2601	0/0:22,0:22:57.13:0,57,3852	0/0:19,0:17:38.93:0,39,472	0/0:40,0:40:96.15:0,96,1164	1/1:3,20:23:3.01:187,3,0	1/1:16,0:16:39.04:504,39,0	1/1:12,0:12:14.98:125,15,0	0/0:18,0:18:51.10:0,51,2817	0/0:26,0:26:72.12:0,72,4399	0/0:19,0:19:39.10:0,39,2948	1/1:11,0:11:6:51,6,0	0/0:18,0:18:48.13:0,48,3967	0/0:18,0:18:41.80:0,42,2202	0/0:22,0:22:66.10:0,66,2899	1/1:17,0:17:38.88:318,39,0	1/1:7,25:32:20.85:154,21,0	1/1:12,0:12:11.72:93,12,0	0/0:25,0:25:69.13:0,69,4179	0/0:19,0:19:45.05:0,45,3229	0/0:12,0:11:23.92:0,24,1316	1/1:12,0:12:23.97:245,24,0	1/1:20,0:20:50.85:617,51,0	1/1:19,0:19:44.85:403,45,0	1/1:0,11:11:3.01:188,3,0
chr10	57989994	.	ACTAT	A	972	PASS	AB=0.970;AC=30;AF=0.652;AN=46;BaseQRankSum=9.142;DP=534;FS=5.181;HRun=0;HaplotypeScore=111.6484;InbreedingCoeff=0.4499;MQ=56.43;MQ0=7;MQRankSum=-5.030;QD=3.16;ReadPosRankSum=-2.175;VQSLOD=1.7187;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:12,10:22:15.05:219,15,0	1/1:5,0:14:23.99:217,24,0	./.	./.	0/1:15,0:22:7.97:8,0,228	0/1:20,1:21:15.42:15,0,572	0/0:22,0:20:11.33:0,11,202	./.	1/1:20,0:20:0.47:1,0,0	1/1:18,0:18:13.23:53,13,0	1/1:12,0:12:7.79:30,8,0	0/1:18,0:18:29.16:29,0,257	0/0:26,0:26:33.08:0,33,627	0/0:14,0:14:21.07:0,21,480	./.	0/0:20,0:20:39.13:0,39,821	1/1:10,6:16:15.05:228,15,0	0/1:23,2:24:18.44:18,0,495	1/1:20,0:21:15.91:63,16,0	./.	1/1:13,0:13:2.60:10,3,0	0/0:24,0:24:27.09:0,27,605	0/0:16,0:16:30.10:0,30,660	1/1:7,6:12:6.02:91,6,0	1/1:9,0:8:2.60:10,3,0	1/1:27,0:27:23.45:94,23,0	1/1:26,0:25:0.43:44,0,0	1/1:11,0:11:0.89:2,1,0
chr10	57990007	.	CTAT	C	1790.26	PASS	AB=0.746;AC=11;AF=0.196;AN=56;BaseQRankSum=11.248;DP=536;FS=0.998;HRun=0;HaplotypeScore=101.6161;InbreedingCoeff=-0.1343;MQ=53.54;MQ0=7;MQRankSum=-5.877;QD=9.28;ReadPosRankSum=1.254;VQSLOD=3.1398;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:29:33.07:0,33,588	0/1:14,0:14:50.58:51,0,158	0/0:17,0:7:21.06:0,21,261	0/0:3,0:2:3.01:0,3,39	0/0:21,0:21:57.18:0,57,858	0/0:21,0:21:55.82:0,56,1068	0/0:20,0:18:41.37:0,41,683	0/0:34,0:29:85.52:0,86,1094	0/0:20,0:20:2.68:0,3,11	0/1:10,8:18:99:355,0,335	0/1:5,8:13:98.75:146,0,99	0/0:15,0:15:38.71:0,39,679	0/0:22,0:22:66.22:0,66,1219	0/0:17,0:17:51.17:0,51,955	0/1:21,0:21:9.64:10,0,91	0/0:20,0:20:60.20:0,60,1257	0/0:15,0:15:2.31:0,2,276	0/0:26,0:26:64.87:0,65,1189	0/1:11,6:17:99:362,0,263	1/1:28,0:27:0.98:66,1,0	0/1:7,8:15:46.15:46,0,55	0/0:23,0:23:69.19:0,69,1168	0/0:15,0:15:45.15:0,45,934	0/0:14,0:13:12.34:0,12,245	0/1:6,6:11:39.93:40,0,141	0/1:16,11:27:99:509,0,494	0/1:12,16:27:99:346,0,298	0/0:11,0:11:2.60:0,3,10
chr10	57990014	.	T	TC	423.03	PASS	AB=0.779;AC=2;AF=0.037;AN=54;BaseQRankSum=3.327;DP=538;FS=7.643;HRun=1;HaplotypeScore=93.9754;InbreedingCoeff=-0.0508;MQ=53.53;MQ0=9;MQRankSum=-2.687;QD=8.14;ReadPosRankSum=-1.299;VQSLOD=0.1079;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:33:68.11:0,68,795	0/0:13,0:13:34.94:0,35,274	0/0:10,0:3:2.98:0,3,21	./.	0/0:23,0:23:55.99:0,56,696	0/0:19,0:19:57.10:0,57,718	0/0:17,0:15:33.36:0,33,403	0/0:32,0:27:81.19:0,81,995	0/0:23,0:23:9.03:0,9,115	0/0:22,0:22:57.10:0,57,645	0/0:13,0:13:15.03:0,15,161	0/0:15,0:15:42.05:0,42,513	0/0:21,0:21:63.20:0,63,818	0/0:20,0:20:57.19:0,57,739	0/1:9,14:23:21.47:487,0,21	0/0:22,0:22:66.21:0,66,857	0/0:15,0:15:38.70:0,39,394	0/0:27,0:27:63.06:0,63,760	0/0:17,0:16:46.60:0,47,505	0/1:27,2:28:23.18:23,0,209	0/0:13,0:13:6.02:0,6,70	0/0:20,0:20:60.20:0,60,779	0/0:17,0:17:51.17:0,51,662	0/0:12,0:11:20.90:0,21,228	0/0:15,0:14:21.06:0,21,263	0/0:23,0:23:69.16:0,69,791	0/0:29,0:28:48.12:0,48,557	0/0:11,0:11:3.01:0,3,36
chr10	57992024	.	A	AGTGT	3671.83	PASS	AB=0.821;AC=37;AF=0.712;AN=52;BaseQRankSum=-0.322;DP=570;FS=1.784;HRun=0;HaplotypeScore=130.6025;InbreedingCoeff=-0.4236;MQ=73.70;MQ0=14;MQRankSum=1.308;QD=7.17;ReadPosRankSum=0.028;VQSLOD=2.7769;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:31:68.29:68,0,80	0/1:10,1:12:19.41:74,0,19	./.	./.	0/1:16,0:24:25.53:26,0,38	0/1:14,0:21:36.83:37,0,42	0/1:16,0:17:47.62:48,0,57	1/1:21,0:20:8.17:49,8,0	0/1:25,0:28:97.97:149,0,98	1/1:19,2:20:18.84:285,19,0	1/1:10,7:20:2.80:70,3,0	1/1:14,0:14:17.11:282,17,0	1/1:12,0:14:5.30:66,5,0	0/1:13,0:14:31.38:52,0,31	0/1:6,6:15:14.07:318,0,14	1/1:9,8:16:8.77:151,9,0	1/1:13,2:27:18.16:310,18,0	0/1:13,0:15:31.87:32,0,101	1/1:21,0:21:11.97:132,12,0	1/1:8,9:19:9.42:160,9,0	0/1:28,10:40:30.19:200,0,30	0/1:10,0:20:49.95:50,0,62	0/1:13,0:13:16.36:16,0,82	0/1:9,0:15:35.10:40,0,35	0/1:10,0:16:0.74:47,0,1	1/1:17,7:26:40.90:706,41,0	1/1:8,0:13:11.73:173,12,0	0/1:12,0:12:18.11:132,0,18
chr10	57992295	.	C	CT	889.33	PASS	AB=0.891;AC=14;AF=0.250;AN=56;BaseQRankSum=-2.885;DP=517;FS=4.866;HRun=13;HaplotypeScore=62.1531;InbreedingCoeff=0.0993;MQ=76.75;MQ0=5;MQRankSum=-0.383;QD=3.83;ReadPosRankSum=-1.865;VQSLOD=0.3423;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:34,6:40:12.27:12,0,360	0/1:5,5:10:23.15:93,0,23	0/1:36,0:19:12.15:12,0,64	0/0:20,0:13:0.04:0,0,18	0/1:22,1:26:13.40:13,0,191	0/0:11,0:11:1.79:0,2,109	0/0:16,0:17:10.87:0,11,187	1/1:10,15:24:18.25:289,18,0	0/0:14,3:17:1.85:0,2,157	0/1:12,1:12:10.05:10,0,85	0/0:19,0:19:18.12:0,18,240	0/0:14,1:15:7.82:0,8,198	0/0:7,0:7:11.82:0,12,80	0/0:15,0:14:22.54:0,23,148	0/0:16,0:16:29.66:0,30,204	1/1:5,8:14:1.51:133,2,0	1/1:6,19:27:50.47:431,50,0	0/0:18,1:23:28.79:0,29,315	0/0:22,1:22:10.68:0,11,215	0/0:13,0:13:20.74:0,21,144	0/1:14,2:16:31.92:32,0,99	0/0:7,0:7:20.78:0,21,141	0/0:9,0:11:14.36:0,14,103	0/0:26,1:27:38.31:0,38,403	0/1:8,2:10:13.10:13,0,67	0/0:19,0:19:4.76:0,5,177	0/0:24,0:25:28.58:0,29,310	0/1:11,0:11:6.93:7,0,67
chr10	57992950	.	GGAA	G	460.65	PASS	AB=0.973;AC=19;AF=0.339;AN=56;BaseQRankSum=7.390;DP=419;FS=4.421;HRun=0;HaplotypeScore=58.9513;InbreedingCoeff=0.2404;MQ=42.94;MQ0=30;MQRankSum=-2.171;QD=2.23;ReadPosRankSum=-3.112;VQSLOD=0.2704;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:17.59:0,18,124	1/1:4,0:4:1.93:20,2,0	0/0:36,0:2:2.84:0,3,32	0/0:44,0:8:7.34:0,7,51	1/1:12,0:10:11.56:65,12,0	0/0:15,0:15:21.07:0,21,404	0/0:17,0:16:30.80:0,31,491	0/1:17,0:13:2.68:3,0,179	0/1:16,1:6:13.16:62,0,13	0/1:22,4:18:99:117,0,212	1/1:17,0:12:7.98:41,8,0	0/0:8,0:8:6.02:0,6,124	0/0:6,0:6:10.85:0,11,206	0/0:8,0:8:12.02:0,12,238	1/1:17,0:10:8.58:44,9,0	0/0:4,0:2:4.51:0,5,23	0/0:13,0:13:11.69:0,12,87	0/0:13,0:9:4.54:0,5,99	0/1:15,0:12:45.27:45,0,97	0/1:12,0:11:30.27:30,0,47	1/1:14,0:10:2.49:17,2,0	0/0:6,0:5:8.96:0,9,155	0/0:10,0:9:23.94:0,24,361	0/0:9,0:8:7.84:0,8,102	0/0:10,0:4:2.97:0,3,20	0/1:25,0:16:48.64:49,0,154	1/1:25,0:19:5.79:124,6,0	0/1:5,0:5:6.63:9,0,7
chr10	57992953	.	AGAG	A	1790.82	PASS	AB=1.000;AC=27;AF=0.540;AN=50;BaseQRankSum=5.321;DP=412;FS=32.581;HRun=0;HaplotypeScore=53.0731;InbreedingCoeff=0.6565;MQ=43.40;MQ0=30;MQRankSum=-3.364;QD=8.91;ReadPosRankSum=-1.473;VQSLOD=1.0491;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:9,5:14:2.99:0,3,23	0/1:2,0:2:20.49:35,0,20	./.	0/0:43,0:8:0:0,0,0	1/1:5,7:10:12.03:152,12,0	0/0:15,0:15:21.05:0,21,341	0/0:17,0:16:27.75:0,28,395	1/1:13,2:11:8.99:95,9,0	1/1:17,0:6:9.02:110,9,0	1/1:27,0:18:27.08:355,27,0	1/1:15,0:10:8.98:123,9,0	0/0:8,0:8:6.02:0,6,118	0/0:6,0:6:9.03:0,9,167	0/0:9,0:9:14.87:0,15,234	1/1:16,0:9:9.02:123,9,0	1/1:4,0:2:2.90:16,3,0	1/1:14,0:14:2.03:5,2,0	0/0:12,0:9:5.93:0,6,62	1/1:15,0:12:11.34:153,11,0	1/1:9,0:8:12:143,12,0	./.	0/0:7,0:6:6.02:0,6,101	0/0:10,0:10:18.06:0,18,338	0/0:11,0:9:3.41:0,3,61	./.	1/1:25,0:15:24.07:311,24,0	1/1:18,6:18:21.07:287,21,0	1/1:6,0:6:5.85:62,6,0
chr10	57992979	.	AGG	A	700.97	PASS	AB=0.713;AC=10;AF=0.192;AN=52;BaseQRankSum=8.710;DP=437;FS=3.783;HRun=2;HaplotypeScore=62.0728;InbreedingCoeff=-0.2429;MQ=45.20;MQ0=29;MQRankSum=-0.960;QD=3.98;ReadPosRankSum=5.989;VQSLOD=-0.7606;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:56.72:0,57,709	0/0:7,0:7:10.29:0,10,91	./.	./.	0/0:18,0:17:16.97:0,17,226	0/0:20,0:19:51.15:0,51,789	0/0:27,0:23:53.67:0,54,890	0/0:18,0:16:40.33:0,40,440	0/1:6,12:8:33.72:34,0,41	0/1:14,11:16:31.67:198,0,32	0/1:10,8:14:53.50:78,0,53	0/0:12,0:11:27.56:0,28,395	0/0:12,0:12:32.97:0,33,481	0/0:15,0:14:36.11:0,36,553	0/1:12,8:13:22.62:99,0,23	0/0:6,1:5:15.03:0,15,176	0/0:17,0:14:8.94:0,9,79	0/0:13,0:10:18.06:0,18,271	0/1:5,4:8:70.96:71,0,76	0/1:11,4:14:45.63:46,0,62	0/1:12,1:7:5.80:6,0,45	0/0:17,0:16:17.84:0,18,238	0/0:21,0:20:50.35:0,50,737	0/0:18,0:14:27.08:0,27,383	0/0:6,6:6:7.71:0,8,59	0/1:17,10:17:61.25:173,0,61	0/1:13,13:20:39.41:117,0,39	0/1:2,3:5:18.73:19,0,64
chr10	57992981	.	G	GAGA	2286.41	PASS	AB=1.000;AC=30;AF=0.577;AN=52;BaseQRankSum=3.460;DP=439;FS=10.027;HRun=0;HaplotypeScore=69.0444;InbreedingCoeff=0.7686;MQ=45.38;MQ0=30;MQRankSum=1.048;QD=8.73;ReadPosRankSum=1.254;VQSLOD=1.1652;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:42.40:0,42,368	1/1:7,0:7:9.12:126,9,0	./.	./.	0/1:18,0:17:66.13:66,0,116	0/0:18,0:17:48.02:0,48,534	0/0:25,0:22:54.86:0,55,621	1/1:19,0:17:8.38:95,8,0	1/1:20,0:9:22.23:184,22,0	1/1:26,0:16:42.10:379,42,0	1/1:17,0:13:25.49:187,25,0	0/0:13,0:12:22.29:0,22,246	0/0:12,0:12:29.85:0,30,309	0/0:15,0:14:29.91:0,30,338	1/1:19,0:12:25:185,25,0	0/1:7,0:5:7.24:7,0,45	1/1:5,12:15:3.14:79,3,0	0/0:14,0:11:20.89:0,21,183	1/1:9,0:8:10.55:65,11,0	1/1:15,0:14:24.45:190,24,0	1/1:13,0:7:15.40:116,15,0	0/0:18,0:17:8.42:0,8,128	0/0:20,0:19:37.91:0,38,477	0/0:17,0:13:24.14:0,24,209	1/1:13,0:7:17.94:146,18,0	1/1:27,0:17:37.25:298,37,0	1/1:29,0:23:32.50:343,33,0	1/1:5,0:5:4.13:24,4,0
chr10	57994666	.	C	CCTATCTAT	10068.60	PASS	AB=1.000;AC=43;AF=0.827;AN=52;BaseQRankSum=0.181;DP=724;FS=2.196;HRun=0;HaplotypeScore=195.9339;InbreedingCoeff=0.6685;MQ=71.40;MQ0=3;MQRankSum=-6.118;QD=18.11;ReadPosRankSum=-3.055;VQSLOD=3.5318;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:26:8.98:73,9,0	1/1:11,0:14:11.98:98,12,0	./.	./.	1/1:21,11:36:12.04:464,12,0	1/1:16,8:24:18.06:714,18,0	1/1:10,0:10:6.02:152,6,0	1/1:33,0:33:5.45:14,5,0	1/1:19,0:33:15.05:506,15,0	1/1:31,8:41:37.36:1224,37,0	1/1:10,6:18:6.02:215,6,0	1/1:18,10:31:21.07:817,21,0	0/0:24,0:24:30.09:0,30,664	0/0:35,0:35:39.13:0,39,919	1/1:23,0:22:11.69:252,12,0	0/0:27,0:27:45.13:0,45,1045	0/0:29,0:29:21.06:0,21,425	1/1:16,0:16:18.06:336,18,0	1/1:16,5:23:30.08:956,30,0	0/1:31,0:31:11.29:401,0,11	1/1:23,0:23:13.07:195,13,0	1/1:14,11:26:23.89:902,24,0	1/1:19,2:22:6:230,6,0	1/1:10,4:16:3.01:111,3,0	1/1:14,0:33:21.07:588,21,0	1/1:20,1:31:36.12:962,36,0	1/1:21,8:33:21.05:737,21,0	1/1:7,5:12:3.01:121,3,0
chr10	57996173	.	C	CAT	15332.38	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-16.283;DP=697;FS=5.304;HRun=0;HaplotypeScore=82.4013;InbreedingCoeff=0.9993;MQ=82.46;MQ0=0;MQRankSum=-4.647;QD=49.62;ReadPosRankSum=3.472;VQSLOD=6.0432;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,135,2029	0/0:13,0:13:30.05:0,30,405	0/0:20,0:20:48.22:0,48,681	0/0:26,0:26:69.14:0,69,944	0/0:22,0:22:63.21:0,63,960	0/0:20,0:20:60.20:0,60,888	0/0:26,0:26:78.23:0,78,1149	0/0:24,0:24:72.23:0,72,1061	1/1:0,22:22:60.21:1153,60,0	1/1:0,23:23:69.16:1242,69,0	1/1:1,21:22:39.13:731,39,0	0/0:19,0:19:57.19:0,57,863	0/0:15,0:15:42.07:0,42,614	0/0:24,0:24:66.22:0,66,972	1/1:1,32:33:87.30:1638,87,0	0/0:17,0:17:51.15:0,51,739	0/0:26,0:26:75.24:0,75,1119	0/0:16,0:16:48.15:0,48,713	1/1:1,16:17:51.17:962,51,0	1/1:1,30:31:84.29:1620,84,0	1/1:3,62:65:99:2994,143,0	0/0:23,0:23:69.23:0,69,1041	0/0:24,0:24:69.22:0,69,1022	0/0:24,0:24:69.23:0,69,1049	1/1:0,23:23:63.22:1210,63,0	1/1:2,30:33:99:1855,99,0	1/1:0,32:33:81.28:1521,81,0	1/1:0,7:7:21.07:405,21,0
chr10	57996690	.	AACACAC	A	248.90	PASS	AB=0.909;AC=11;AF=0.550;AN=20;BaseQRankSum=0.529;DP=282;FS=0.000;HRun=0;HaplotypeScore=25.3417;InbreedingCoeff=0.2538;MQ=36.48;MQ0=202;MQRankSum=0.135;QD=4.15;ReadPosRankSum=0.135;VQSLOD=0.4947;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	1/1:7,0:4:2.84:14,3,0	./.	0/0:27,0:6:3:0,3,26	0/0:5,0:1:3.01:0,3,31	./.	./.	./.	1/1:7,0:1:2.97:20,3,0	0/1:9,1:2:7.02:58,0,7	./.	./.	./.	./.	./.	./.	./.	./.	1/1:8,1:1:3.01:64,3,0	1/1:17,0:16:6.02:127,6,0	./.	0/0:20,0:1:3:0,3,25	./.	0/0:12,0:1:3.01:0,3,74	1/1:4,2:3:3.01:57,3,0	./.	./.	./.
chr10	57996700	.	C	CACACACAA	332.80	PASS	AB=1.000;AC=15;AF=0.625;AN=24;BaseQRankSum=1.676;DP=278;FS=0.000;HRun=0;HaplotypeScore=28.1587;InbreedingCoeff=0.2523;MQ=25.52;MQ0=199;MQRankSum=1.183;QD=4.38;ReadPosRankSum=-1.183;VQSLOD=0.8038;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	1/1:12,0:4:2.97:20,3,0	./.	0/0:18,0:3:3:0,3,26	0/0:11,0:3:0.03:0,0,26	./.	./.	./.	1/1:7,0:1:2.97:20,3,0	0/1:11,0:2:7.05:58,0,7	1/1:2,3:3:2.97:20,3,0	./.	./.	./.	./.	./.	./.	./.	1/1:8,0:1:3.01:64,3,0	1/1:3,14:16:7.27:170,7,0	./.	0/0:16,0:1:3:0,3,25	1/1:9,0:3:0.89:2,1,0	0/0:12,0:1:3.01:0,3,73	1/1:7,0:4:5.93:74,6,0	./.	./.	./.
chr10	57996965	.	CAAGCAAGT	C	1700.69	PASS	AC=18;AF=0.391;AN=46;BaseQRankSum=7.861;DP=293;FS=0.000;HRun=0;HaplotypeScore=45.2357;InbreedingCoeff=0.7122;MQ=22.42;MQ0=131;MQRankSum=-0.845;QD=27.88;ReadPosRankSum=2.298;VQSLOD=2.6568;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:7:3.01:0,3,72	0/0:15,0:5:12.04:0,12,446	./.	./.	0/0:13,0:6:3.01:0,3,126	0/0:20,0:10:15.05:0,15,532	0/0:11,0:6:15.05:0,15,566	0/0:12,0:9:21.07:0,21,831	1/1:10,2:10:17.99:279,18,0	1/1:2,0:2:6.02:79,6,0	1/1:5,0:5:15.04:170,15,0	0/0:10,0:5:5.62:0,6,252	0/0:7,0:4:6.02:0,6,251	./.	./.	0/0:8,0:5:9.03:0,9,325	0/0:19,0:9:15.05:0,15,483	0/0:10,0:4:3.01:0,3,82	1/1:6,0:6:12.04:155,12,0	1/1:6,1:7:21.07:288,21,0	./.	0/0:20,0:4:12.04:0,12,444	0/0:13,0:4:3.01:0,3,126	0/0:17,0:3:3.01:0,3,69	1/1:7,1:5:12.04:201,12,0	1/1:12,2:13:39.12:586,39,0	1/1:6,0:5:9.03:108,9,0	1/1:1,0:1:1.55:4,2,0
chr10	57996969	.	CAAGT	C	2093.43	PASS	AC=16;AF=0.333;AN=48;BaseQRankSum=8.169;DP=301;FS=0.000;HRun=0;HaplotypeScore=35.9653;InbreedingCoeff=0.7214;MQ=23.35;MQ0=131;MQRankSum=-1.353;QD=33.76;ReadPosRankSum=3.728;VQSLOD=3.3747;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:7:5.95:0,6,71	0/0:14,0:4:12.04:0,12,296	./.	./.	0/0:15,0:6:3.01:0,3,80	0/0:22,0:12:23.88:0,24,422	0/0:10,0:6:15.05:0,15,364	0/0:14,0:10:30.02:0,30,614	1/1:7,6:11:18.03:259,18,0	1/1:0,3:3:6.02:114,6,0	1/1:0,5:5:15.05:283,15,0	0/0:9,0:5:5.72:0,6,160	0/0:7,0:4:6.02:0,6,160	0/0:8,0:3:3.01:0,3,39	./.	0/0:8,0:5:9.03:0,9,214	0/0:19,0:9:18.01:0,18,343	0/0:10,0:4:3.01:0,3,59	1/1:0,5:5:12.04:226,12,0	1/1:1,6:7:21.04:362,21,0	./.	0/0:21,0:5:12.04:0,12,280	0/0:14,0:6:9:0,9,130	0/0:17,0:3:3.01:0,3,52	1/1:2,6:5:12.03:178,12,0	1/1:4,12:14:42.11:675,42,0	1/1:1,4:4:9.03:170,9,0	0/0:1,0:1:2.68:0,3,11
chr10	57997147	.	CT	C	2872.73	PASS	AB=0.811;AC=34;AF=0.607;AN=56;BaseQRankSum=4.094;DP=463;FS=8.568;HRun=13;HaplotypeScore=74.7918;InbreedingCoeff=0.4976;MQ=79.62;MQ0=4;MQRankSum=-5.326;QD=8.68;ReadPosRankSum=0.551;VQSLOD=2.3661;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,14:20:42.97:284,43,0	1/1:4,0:8:10.89:36,11,0	0/0:50,0:22:16.06:0,16,239	0/1:29,1:21:5.28:5,0,61	1/1:3,17:20:44.54:319,45,0	0/0:20,1:23:21.89:0,22,354	0/1:7,1:9:4.04:4,0,113	1/1:12,0:22:25.61:81,26,0	1/1:5,5:11:19.90:135,20,0	0/1:6,6:12:5.32:129,0,5	1/1:5,10:16:11.65:237,12,0	0/1:8,1:9:1.06:1,0,137	0/0:8,0:8:24.04:0,24,233	0/0:6,0:6:14.93:0,15,128	0/1:3,4:7:13.15:54,0,13	0/1:7,2:10:17.02:17,0,150	1/1:3,0:19:34.62:101,35,0	0/0:12,0:12:32.99:0,33,301	1/1:15,10:26:33.78:245,34,0	0/1:7,5:12:31.97:111,0,32	1/1:3,8:10:23.82:173,24,0	0/1:9,0:10:6.48:6,0,126	0/0:20,0:20:22.19:0,22,338	0/0:12,0:13:35.89:0,36,335	1/1:10,15:24:35.61:398,36,0	1/1:12,14:26:44.67:327,45,0	1/1:6,9:15:32.69:233,33,0	1/1:1,8:9:23.86:175,24,0
chr10	57997178	.	A	AT	5417.82	PASS	AB=0.920;AC=29;AF=0.518;AN=56;BaseQRankSum=-0.381;DP=424;FS=3.202;HRun=8;HaplotypeScore=66.2642;InbreedingCoeff=0.9415;MQ=77.86;MQ0=1;MQRankSum=-6.336;QD=23.05;ReadPosRankSum=-0.364;VQSLOD=5.2011;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:60:0,60,543	1/1:1,8:9:21.06:242,21,0	0/0:28,0:19:25.50:0,26,285	0/1:21,0:18:1.74:2,0,105	0/0:16,0:16:39.02:0,39,357	0/0:17,0:17:45.02:0,45,412	0/0:12,0:12:33.01:0,33,302	1/1:5,18:23:51.15:589,51,0	1/1:1,13:14:42.11:475,42,0	1/1:5,11:16:36.08:400,36,0	1/1:6,5:11:15.04:173,15,0	0/0:6,0:6:18.01:0,18,165	0/0:8,0:8:15:0,15,137	0/0:9,0:9:23.98:0,24,211	1/1:0,11:11:30.09:346,30,0	0/0:10,0:10:20.98:0,21,188	1/1:7,14:21:39.12:450,39,0	0/0:17,0:17:38.94:0,39,342	1/1:5,17:21:51.14:581,51,0	1/1:0,11:11:33.10:381,33,0	1/1:2,10:12:30.07:329,30,0	0/0:10,0:10:24:0,24,220	0/0:18,0:18:51.03:0,51,467	0/0:15,0:15:35.99:0,36,329	1/1:4,18:22:54.11:600,54,0	1/1:6,12:18:39.07:435,39,0	1/1:3,12:15:27.05:312,27,0	1/1:2,5:7:9.03:104,9,0
chr10	57998117	.	T	TCTTG	22073.32	PASS	AB=0.962;AC=23;AF=0.411;AN=56;BaseQRankSum=-10.721;DP=760;FS=4.052;HRun=0;HaplotypeScore=112.0775;InbreedingCoeff=0.9312;MQ=90.21;MQ0=1;MQRankSum=-6.367;QD=61.14;ReadPosRankSum=1.319;VQSLOD=6.9737;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:81.26:0,81,1536	0/0:7,0:7:21.07:0,21,396	0/0:31,0:31:78.18:0,78,1309	0/0:31,0:31:90.25:0,90,1703	0/0:31,0:31:87.28:0,87,1634	0/0:32,0:31:96.28:0,96,1737	0/0:15,0:15:42.14:0,42,795	0/0:40,0:40:99:0,105,1851	1/1:4,29:35:84.29:2293,84,0	1/1:1,36:42:99:3044,117,0	1/1:2,27:31:81.15:2000,81,0	0/0:13,0:13:39.13:0,39,747	0/0:32,0:32:96.32:0,96,1808	0/0:23,0:23:69.21:0,69,1259	1/1:4,30:37:78.27:2112,78,0	0/1:24,1:25:9.97:10,0,1220	0/0:17,0:17:48.14:0,48,892	0/0:22,0:22:66.20:0,66,1208	1/1:7,10:20:57.18:1310,57,0	1/1:6,30:37:84.23:2191,84,0	1/1:1,29:32:81.28:2159,81,0	0/0:29,0:29:87.29:0,87,1656	0/0:25,0:25:75.24:0,75,1418	0/0:22,0:22:57.16:0,57,1024	1/1:5,16:21:57.06:1393,57,0	1/1:3,32:38:99:2806,111,0	1/1:2,29:32:84.29:2264,84,0	1/1:0,8:9:18.06:492,18,0
chr10	57999886	.	CGTAT	C	6177.53	PASS	AB=0.939;AC=29;AF=0.558;AN=52;BaseQRankSum=6.438;DP=799;FS=0.000;HRun=0;HaplotypeScore=152.1889;InbreedingCoeff=0.7260;MQ=72.00;MQ0=8;MQRankSum=1.763;QD=13.94;ReadPosRankSum=-0.042;VQSLOD=4.1922;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:36,11:47:21.07:321,21,0	1/1:3,3:6:9.03:136,9,0	./.	./.	1/1:20,16:36:36.12:551,36,0	0/0:27,0:26:27.09:0,27,610	0/1:27,1:28:18.78:19,0,518	0/0:37,0:36:5.42:0,5,23	1/1:16,12:28:36.12:551,36,0	1/1:17,13:32:48.11:672,48,0	1/1:16,8:24:18.06:275,18,0	0/0:27,0:28:15.05:0,15,332	0/0:25,0:37:39.12:0,39,681	0/0:12,0:26:36.11:0,36,599	0/0:42,0:42:69.21:0,69,1485	0/0:21,0:21:42.13:0,42,903	0/0:16,0:23:21.07:0,21,384	0/1:14,0:15:12.25:22,0,12	1/1:11,6:17:18.06:275,18,0	1/1:26,11:38:33.10:486,33,0	1/1:19,24:43:35.18:804,35,0	0/0:29,0:29:33.10:0,33,717	0/1:24,1:25:15.77:16,0,586	0/0:26,0:26:30.10:0,30,699	1/1:16,11:29:27.08:377,27,0	1/1:13,20:33:57.19:848,57,0	1/1:10,19:29:48.16:734,48,0	1/1:11,0:11:6.02:92,6,0
chr10	58002004	.	AT	A	370.40	PASS	AB=0.846;AC=2;AF=0.036;AN=56;BaseQRankSum=5.730;DP=656;FS=11.719;HRun=2;HaplotypeScore=69.0684;InbreedingCoeff=-0.0349;MQ=80.97;MQ0=0;MQRankSum=-1.736;QD=8.05;ReadPosRankSum=1.216;VQSLOD=-0.2133;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:63.21:0,63,942	0/0:18,0:18:54.10:0,54,781	0/0:23,0:23:67.68:0,68,869	0/1:10,0:10:8.31:8,0,220	0/0:26,0:26:72.24:0,72,1077	0/0:33,0:33:99:0,99,1469	0/0:11,0:11:33.10:0,33,477	0/0:63,0:63:99:0,181,2629	0/0:21,0:21:63.21:0,63,944	0/0:30,0:31:93.31:0,93,1367	0/0:25,0:25:66.19:0,66,965	0/0:20,0:20:57.18:0,57,834	0/0:27,0:27:78.23:0,78,1126	0/0:16,0:16:48.16:0,48,719	0/0:18,0:18:51.17:0,51,764	0/0:15,0:15:45.15:0,45,675	0/0:25,0:25:75.24:0,75,1099	0/1:20,16:36:99:444,0,734	0/0:34,0:34:99:0,99,1464	0/0:28,0:28:84.26:0,84,1214	0/0:13,0:13:39.10:0,39,562	0/0:25,0:25:72.22:0,72,1041	0/0:20,0:20:60.18:0,60,859	0/0:19,0:19:57.18:0,57,835	0/0:23,0:23:69.23:0,69,1033	0/0:22,0:22:66.22:0,66,989	0/0:27,0:27:81.23:0,81,1135	0/0:6,0:6:18.06:0,18,270
chr10	58002056	.	T	TCCTC	4320.92	PASS	AB=0.705;AC=4;AF=0.071;AN=56;BaseQRankSum=5.105;DP=738;FS=28.941;HRun=0;HaplotypeScore=156.9737;InbreedingCoeff=-0.0769;MQ=64.55;MQ0=0;MQRankSum=-9.630;QD=28.24;ReadPosRankSum=-4.401;VQSLOD=2.3248;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:66.20:0,66,1204	0/1:9,9:18:99:592,0,461	0/0:30,0:22:60.18:0,60,975	0/0:29,0:22:42.53:0,43,700	0/0:24,0:24:66.23:0,66,1224	0/0:26,0:26:72.23:0,72,1299	0/0:23,0:23:66.21:0,66,1189	0/1:45,34:83:99:2374,0,1503	0/0:30,0:30:87.30:0,87,1608	0/0:33,0:33:96.31:0,96,1726	0/0:17,0:17:48.16:0,48,882	0/0:27,0:27:78.25:0,78,1404	0/0:25,0:25:72.21:0,72,1262	0/0:18,0:18:48.15:0,48,866	0/0:14,0:14:36.10:0,36,608	0/0:21,0:21:60.19:0,60,1082	0/1:16,11:27:99:441,0,699	0/1:17,7:25:99:914,0,453	0/0:27,0:27:67.06:0,67,1320	0/0:41,0:41:99:0,117,2026	0/0:14,0:14:42.14:0,42,797	0/0:21,0:21:57.18:0,57,1040	0/0:15,0:15:45.13:0,45,785	0/0:29,0:29:84.22:0,84,1478	0/0:26,0:26:75.25:0,75,1375	0/0:35,0:35:99:0,99,1869	0/0:25,0:25:75.24:0,75,1377	0/0:11,0:11:33.11:0,33,626
chr10	58003005	.	T	TA	1936.54	PASS	AB=0.693;AC=4;AF=0.071;AN=56;BaseQRankSum=-8.562;DP=691;FS=8.562;HRun=7;HaplotypeScore=77.1472;InbreedingCoeff=-0.0771;MQ=76.83;MQ0=0;MQRankSum=0.821;QD=10.82;ReadPosRankSum=0.015;VQSLOD=1.6333;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,117,1110	0/1:17,9:26:99:246,0,382	0/0:10,0:10:23.90:0,24,202	0/0:19,0:19:42.01:0,42,389	0/0:32,0:32:84.08:0,84,793	0/0:18,0:18:36.05:0,36,348	0/0:21,0:21:63.04:0,63,592	0/1:27,25:52:99:728,0,412	0/0:14,0:14:39.05:0,39,371	0/0:26,0:26:66.10:0,66,637	0/0:21,0:21:54.05:0,54,513	0/0:27,0:27:75.11:0,75,718	0/0:15,0:15:39.06:0,39,377	0/0:20,0:20:57.06:0,57,539	0/0:20,0:20:57.08:0,57,546	0/0:15,0:15:39.04:0,39,367	0/1:36,20:56:99:469,0,773	0/1:17,18:45:99:604,0,108	0/0:15,0:15:39.06:0,39,377	0/0:28,0:28:75.10:0,75,717	0/0:24,0:24:63.06:0,63,595	0/0:21,0:21:57.09:0,57,550	0/0:23,0:23:63.06:0,63,591	0/0:13,0:13:33.03:0,33,312	0/0:21,0:21:60.05:0,60,565	0/0:24,0:24:57.07:0,57,547	0/0:27,0:27:81.10:0,81,767	0/0:11,0:11:30.05:0,30,289
chr10	58003127	.	TAATC	T	13310.10	PASS	AB=0.941;AC=45;AF=0.804;AN=56;BaseQRankSum=5.759;DP=725;FS=0.000;HRun=0;HaplotypeScore=139.0382;InbreedingCoeff=0.8787;MQ=72.67;MQ0=4;MQRankSum=-0.085;QD=24.83;ReadPosRankSum=3.962;VQSLOD=4.6747;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,19:27:54.18:862,54,0	0/0:20,0:20:39.13:0,39,900	0/0:25,0:24:15.05:0,15,315	0/0:29,0:26:27.09:0,27,602	1/1:8,18:25:45.15:718,45,0	1/1:5,15:19:39.13:622,39,0	1/1:6,12:19:30.10:479,30,0	0/0:61,0:61:78.24:0,78,1712	1/1:15,11:26:30.10:479,30,0	1/1:13,15:28:45.13:680,45,0	1/1:6,18:23:42.14:669,42,0	1/1:8,15:23:39.13:623,39,0	1/1:5,18:23:42.14:671,42,0	1/1:5,8:13:24.08:383,24,0	1/1:10,18:28:51.17:814,51,0	1/1:4,9:13:27.09:431,27,0	0/0:54,0:54:99:0,102,2416	0/1:30,2:32:32.58:33,0,1282	1/1:18,11:29:33.09:493,33,0	1/1:11,20:31:51.17:814,51,0	1/1:9,10:19:30.10:479,30,0	1/1:13,8:21:18.06:287,18,0	1/1:8,13:21:39.13:623,39,0	1/1:6,18:24:42.14:671,42,0	1/1:11,18:29:48.16:766,48,0	1/1:10,15:25:45.15:709,45,0	1/1:7,16:23:45.15:718,45,0	1/1:5,7:12:18.06:287,18,0
chr10	58003781	.	A	ACAGGGCCTTCCC	39914.47	PASS	AB=0.847;AC=26;AF=0.464;AN=56;BaseQRankSum=-4.972;DP=709;FS=4.820;HRun=0;HaplotypeScore=225.2612;InbreedingCoeff=0.6882;MQ=84.27;MQ0=0;MQRankSum=-19.337;QD=103.14;ReadPosRankSum=-1.688;VQSLOD=3.8623;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,114,4113	0/1:22,2:24:99:604,0,2042	0/0:25,0:25:66.08:0,66,1848	0/0:28,0:28:67.78:0,68,2037	0/0:23,0:23:66.21:0,66,2354	0/0:21,0:21:57.17:0,57,1940	0/0:28,0:28:84.29:0,84,2981	0/1:58,11:72:99:5287,0,2566	1/1:10,12:23:57.20:3299,57,0	1/1:9,6:17:48.16:2300,48,0	1/1:0,16:18:51.18:3082,51,0	0/0:14,0:14:36.12:0,36,1269	0/0:23,0:23:63.22:0,63,2243	0/0:30,0:30:81.28:0,81,2847	1/1:10,10:22:57.20:3187,57,0	0/0:22,0:22:60.21:0,60,2145	0/1:36,6:43:99:2431,0,2393	0/1:21,7:30:99:1956,0,1293	1/1:15,4:20:57.20:2484,57,0	1/1:12,18:34:90.31:4843,90,0	1/1:12,5:19:30.10:1663,30,0	0/0:23,0:23:69.18:0,69,2314	0/0:27,0:27:75.26:0,75,2726	0/0:17,0:17:51.18:0,51,1833	1/1:6,16:24:60.21:3485,60,0	1/1:9,9:20:46.02:2325,46,0	1/1:8,12:20:51.18:2908,51,0	1/1:1,0:1:3.01:60,3,0
chr10	58003974	.	C	CCACACACACACA	4159.60	PASS	AB=1.000;AC=23;AF=0.426;AN=54;BaseQRankSum=3.386;DP=522;FS=0.000;HRun=0;HaplotypeScore=185.6237;InbreedingCoeff=0.6091;MQ=68.95;MQ0=10;MQRankSum=-6.124;QD=20.69;ReadPosRankSum=-5.085;VQSLOD=1.1119;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:45.15:0,45,1561	0/1:8,0:8:71.07:71,0,307	0/0:47,0:26:63.25:0,63,2152	0/0:49,0:27:68.40:0,68,1550	0/0:19,0:19:54.19:0,54,1704	0/0:23,0:23:60.21:0,60,2122	0/0:27,0:27:78.05:0,78,2585	0/1:39,0:40:99:194,0,1395	1/1:14,0:15:23.95:336,24,0	1/1:10,0:12:29.18:593,29,0	1/1:10,0:10:12:149,12,0	0/0:19,0:19:51.18:0,51,1869	0/0:12,0:12:36.12:0,36,1200	0/0:21,0:20:60.18:0,60,1754	1/1:14,0:14:19.17:217,19,0	0/0:13,0:13:39.13:0,39,1241	0/1:22,0:22:99:293,0,172	0/1:24,0:24:99:148,0,1001	1/1:10,0:11:24.80:420,25,0	1/1:10,0:10:18.53:341,19,0	1/1:8,0:8:18.02:243,18,0	0/0:15,0:15:42.14:0,42,1236	0/0:23,0:22:66.23:0,66,2311	0/0:21,0:21:46.91:0,47,1640	./.	0/1:8,0:8:15.96:625,0,16	1/1:13,0:13:20.67:264,21,0	1/1:4,0:4:12.02:265,12,0
chr10	58003995	.	CAG	C	852.78	PASS	AB=0.895;AC=30;AF=0.600;AN=50;BaseQRankSum=-0.494;DP=537;FS=13.802;HRun=0;HaplotypeScore=119.2660;InbreedingCoeff=0.1140;MQ=45.37;MQ0=13;MQRankSum=2.978;QD=2.49;ReadPosRankSum=-2.556;VQSLOD=1.1598;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:23:8.95:69,9,0	0/1:8,0:9:0:0,0,0	./.	./.	1/1:27,0:29:32.66:226,33,0	1/1:17,7:24:6.01:65,6,0	0/1:25,0:25:10.35:67,0,10	0/0:51,0:47:8.49:0,8,42	1/1:14,0:14:4.09:32,4,0	0/1:9,0:12:25.73:26,0,37	1/1:8,0:9:0.47:1,0,0	1/1:23,0:22:14.92:113,15,0	0/0:13,0:13:1.04:0,1,111	0/0:17,0:15:21.02:0,21,242	0/0:8,0:9:2.01:0,2,18	1/1:8,1:15:5.84:47,6,0	0/0:28,0:28:2.77:0,3,18	0/1:21,0:22:16.74:17,0,57	0/1:19,0:18:7.68:8,0,20	1/1:9,0:10:5.90:41,6,0	./.	0/1:13,5:18:16.53:26,0,17	1/1:22,0:21:11.96:94,12,0	0/1:16,9:26:19.39:94,0,19	1/1:17,0:14:2.92:17,3,0	0/1:16,0:16:39.72:40,0,80	1/1:10,0:10:2.78:18,3,0	0/0:2,0:1:2.37:0,2,8
chr10	58004438	.	TTCTC	T	661.61	PASS	AB=0.964;AC=17;AF=0.340;AN=50;BaseQRankSum=3.927;DP=698;FS=0.889;HRun=0;HaplotypeScore=146.8228;InbreedingCoeff=0.0995;MQ=62.18;MQ0=12;MQRankSum=-0.793;QD=2.08;ReadPosRankSum=1.186;VQSLOD=2.5078;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:19:2.72:28,3,0	1/1:13,0:16:9.01:84,9,0	./.	./.	0/1:27,0:31:0.50:41,0,0	0/0:16,0:17:8.77:0,9,112	0/0:24,0:24:9.03:0,9,167	0/0:66,0:66:25.86:0,26,335	0/0:22,0:22:4.68:0,5,45	0/0:20,0:20:15.81:0,16,107	0/1:13,0:13:34.66:35,0,37	0/0:16,0:16:8.98:0,9,153	0/0:10,0:10:9:0,9,114	0/0:12,0:12:6:0,6,94	0/1:22,0:22:10.02:39,0,10	1/1:10,8:18:12.03:168,12,0	0/1:47,0:48:7.49:7,0,513	0/1:45,6:52:43.69:188,0,44	0/1:11,0:11:16.84:20,0,17	0/1:18,0:18:34.26:97,0,34	1/1:20,0:20:2.78:19,3,0	0/0:12,0:13:8.75:0,9,86	./.	0/0:24,0:27:23.82:0,24,497	0/0:16,0:15:9.07:0,9,56	0/1:19,0:20:38.91:53,0,39	0/1:28,0:25:21.91:37,0,22	0/0:19,0:19:15.14:0,15,71
chr10	58004954	.	GT	G	1595.86	PASS	AB=0.736;AC=4;AF=0.071;AN=56;BaseQRankSum=12.000;DP=710;FS=0.000;HRun=3;HaplotypeScore=78.8813;InbreedingCoeff=-0.0782;MQ=81.96;MQ0=1;MQRankSum=-4.299;QD=10.43;ReadPosRankSum=-2.828;VQSLOD=0.3826;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,129,1856	0/1:10,13:23:99:420,0,282	0/0:26,0:26:68.59:0,69,940	0/0:26,0:26:75.08:0,75,986	0/0:27,0:27:81.27:0,81,1166	0/0:25,0:25:75.25:0,75,1080	0/0:19,0:19:57.13:0,57,779	0/1:38,25:63:99:825,0,1012	0/0:22,0:22:66.22:0,66,949	0/0:24,0:24:69.19:0,69,922	0/0:21,0:21:60.20:0,60,863	0/0:18,0:18:51.17:0,51,735	0/0:21,0:21:63.21:0,63,907	0/0:20,0:20:57.18:0,57,803	0/0:23,0:23:69.22:0,69,977	0/0:26,0:26:78.25:0,78,1104	0/1:26,12:38:99:322,0,866	0/1:23,6:29:99:139,0,842	0/0:21,0:21:60.20:0,60,864	0/0:30,0:30:87.29:0,87,1251	0/0:25,0:24:69.23:0,69,993	0/0:8,0:8:24.08:0,24,346	0/0:20,0:20:60.20:0,60,864	0/0:23,0:23:69.22:0,69,976	0/0:28,0:28:84.28:0,84,1208	0/0:30,0:30:87.29:0,87,1253	0/0:24,0:24:72.24:0,72,1037	0/0:4,0:4:12.04:0,12,173
chr10	58005000	.	TAA	T	2536.27	PASS	AB=0.670;AC=4;AF=0.071;AN=56;BaseQRankSum=12.827;DP=694;FS=2.851;HRun=3;HaplotypeScore=92.1863;InbreedingCoeff=-0.0773;MQ=83.95;MQ0=0;MQRankSum=-7.421;QD=17.14;ReadPosRankSum=-1.575;VQSLOD=0.5277;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,144,2752	0/1:9,11:20:99:434,0,461	0/0:29,0:29:80.75:0,81,1463	0/0:14,0:14:36.12:0,36,651	0/0:27,0:27:81.28:0,81,1564	0/0:23,0:23:69.22:0,69,1300	0/0:31,0:31:93.29:0,93,1691	0/1:37,30:67:99:1191,0,1628	0/0:26,0:26:78.26:0,78,1469	0/0:25,0:25:75.24:0,75,1389	0/0:17,0:17:51.17:0,51,985	0/0:19,0:19:57.20:0,57,1101	0/0:16,0:16:48.16:0,48,928	0/0:21,0:21:63.20:0,63,1166	0/0:25,0:25:75.26:0,75,1449	0/0:20,0:20:60.20:0,60,1121	0/1:22,16:38:99:620,0,1148	0/1:10,13:23:99:402,0,464	0/0:24,0:24:72.24:0,72,1351	0/0:20,0:20:60.21:0,60,1144	0/0:27,0:27:81.26:0,81,1524	0/0:12,0:12:36.12:0,36,695	0/0:17,0:17:51.16:0,51,951	0/0:18,0:18:54.17:0,54,1011	0/0:25,0:25:75.26:0,75,1442	0/0:28,0:28:84.28:0,84,1587	0/0:28,0:28:84.29:0,84,1612	0/0:6,0:6:18.06:0,18,348
chr10	58006074	.	TAAA	T	2987.94	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-5.885;DP=548;FS=8.038;HRun=8;HaplotypeScore=127.1912;InbreedingCoeff=0.9645;MQ=77.63;MQ0=3;MQRankSum=-5.898;QD=36.00;ReadPosRankSum=-1.263;VQSLOD=1.8702;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:58.02:0,58,348	1/1:2,12:14:36.12:531,36,0	0/0:29,0:18:37.84:0,38,523	0/0:21,0:16:17.03:0,17,192	0/0:33,0:33:94.21:0,94,634	0/0:17,0:16:51.17:0,51,1073	0/0:10,0:10:30.10:0,30,637	1/1:2,33:35:99:1415,99,0	0/0:17,0:16:37.62:0,38,258	0/0:22,0:22:62.05:0,62,444	0/0:34,0:33:83.77:0,84,549	0/0:18,0:18:54.17:0,54,1122	0/0:15,0:15:39.10:0,39,767	0/0:8,0:8:24.08:0,24,523	0/0:12,0:12:20.74:0,21,139	1/1:0,14:14:33.11:486,33,0	1/1:3,17:20:51.12:716,51,0	0/0:29,0:29:75.25:0,75,1252	0/0:18,0:18:49.69:0,50,339	0/0:31,0:31:88.21:0,88,571	0/0:9,0:9:20.25:0,20,118	0/0:10,0:10:30.09:0,30,616	0/0:12,0:12:36.12:0,36,785	0/0:14,0:14:42.14:0,42,915	0/0:24,0:24:49.53:0,50,324	0/0:32,0:32:84.65:0,85,552	0/0:27,0:27:52.95:0,53,338	0/0:2,0:2:5.88:0,6,35
chr10	58006081	.	AAT	A	9872.07	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-1.381;DP=547;FS=1.930;HRun=0;HaplotypeScore=89.0831;InbreedingCoeff=0.9807;MQ=76.38;MQ0=5;MQRankSum=0.848;QD=35.26;ReadPosRankSum=3.585;VQSLOD=6.9262;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,20:21:57.19:834,57,0	0/0:12,0:12:25.02:0,25,87	0/0:31,0:18:26.01:0,26,319	0/0:15,0:10:14.32:0,14,118	1/1:0,33:33:95.85:1235,96,0	0/0:17,0:16:51.16:0,51,893	0/0:11,0:11:32.63:0,33,449	0/0:37,0:37:42.44:0,42,299	1/1:0,16:15:36.04:504,36,0	1/1:0,23:23:69.08:925,69,0	1/1:1,32:32:89.93:1196,90,0	0/0:18,0:18:54.17:0,54,963	0/0:13,0:13:39.09:0,39,637	0/0:10,0:10:30.07:0,30,477	1/1:0,12:12:21.07:310,21,0	0/0:14,0:14:28.85:0,29,125	0/0:21,0:21:34.39:0,34,238	0/0:31,1:32:21.86:0,22,216	1/1:0,17:17:51.06:664,51,0	1/1:0,34:34:92.82:1182,93,0	1/1:0,10:10:21.07:310,21,0	0/0:9,0:9:27.08:0,27,481	0/0:12,0:12:36.11:0,36,630	0/0:15,0:15:45.11:0,45,754	1/1:0,24:24:50.84:715,51,0	1/1:0,30:30:90.03:1199,90,0	1/1:0,25:25:48.16:709,48,0	1/1:0,2:2:6.02:89,6,0
chr10	58006082	.	AT	A	3848.10	PASS	AB=0.909;AC=29;AF=0.518;AN=56;BaseQRankSum=3.925;DP=545;FS=2.582;HRun=10;HaplotypeScore=100.4237;InbreedingCoeff=0.9266;MQ=74.96;MQ0=5;MQRankSum=1.260;QD=11.95;ReadPosRankSum=5.136;VQSLOD=3.3665;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:20,1:21:54.74:295,55,0	0/0:12,0:12:33.04:0,33,160	0/0:29,0:16:15.36:0,15,146	0/0:15,0:10:8.88:0,9,72	1/1:33,0:33:74.82:403,75,0	0/0:17,0:16:45.10:0,45,487	0/1:9,1:10:1.94:2,0,199	0/0:38,0:38:88.91:0,89,533	1/1:16,0:15:31.62:169,32,0	1/1:23,0:23:60.67:337,61,0	1/1:33,0:32:71.85:383,72,0	0/0:18,0:18:54.13:0,54,581	0/0:13,0:13:36.05:0,36,367	0/0:10,0:10:27.04:0,27,281	1/1:12,0:12:20.13:108,20,0	0/0:14,0:14:31.99:0,32,191	0/0:21,0:21:44.33:0,44,334	1/1:5,27:32:14.23:526,14,0	1/1:17,0:17:37.37:199,37,0	1/1:34,0:34:74.94:408,75,0	1/1:10,0:10:20.13:107,20,0	0/0:9,0:9:24.06:0,24,259	0/0:12,0:12:33.08:0,33,356	0/0:15,0:15:39.08:0,39,414	1/1:24,0:24:45.92:242,46,0	1/1:30,0:30:74.05:393,74,0	1/1:25,0:25:46:246,46,0	1/1:2,0:2:5.75:31,6,0
chr10	58006230	.	AT	A	101.32	PASS	AB=0.710;AC=1;AF=0.018;AN=56;BaseQRankSum=5.360;DP=607;FS=6.804;HRun=1;HaplotypeScore=79.2102;InbreedingCoeff=-0.0185;MQ=82.24;MQ0=0;MQRankSum=-5.317;QD=4.61;ReadPosRankSum=0.526;VQSLOD=0.2658;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,114,1763	0/0:10,0:10:30.02:0,30,445	0/0:24,0:24:72.18:0,72,1060	0/0:30,0:30:74.46:0,74,1135	0/0:12,0:12:30.09:0,30,456	0/0:24,0:24:69.22:0,69,1075	0/0:24,0:24:72.25:0,72,1148	0/0:27,0:27:81.26:0,81,1248	0/0:24,0:24:72.23:0,72,1124	0/0:13,0:13:39.13:0,39,602	0/0:14,0:14:39.12:0,39,599	0/0:20,0:20:60.20:0,60,958	0/0:13,0:13:39.13:0,39,623	0/0:28,0:28:84.29:0,84,1336	0/0:23,0:23:69.24:0,69,1103	0/0:18,0:18:54.17:0,54,838	0/0:22,0:22:60.20:0,60,955	0/1:12,9:22:99:176,0,438	0/0:17,0:17:51.17:0,51,809	0/0:26,0:26:69.22:0,69,1071	0/0:43,0:43:99:0,126,2005	0/0:14,0:14:42.13:0,42,648	0/0:7,0:7:18.06:0,18,288	0/0:33,0:33:99:0,99,1582	0/0:25,0:25:69.22:0,69,1069	0/0:26,0:26:75.25:0,75,1189	0/0:20,0:20:57.19:0,57,906	0/0:10,0:10:27.09:0,27,431
chr10	58006232	.	GGA	G	109.35	PASS	AB=0.727;AC=1;AF=0.018;AN=56;BaseQRankSum=5.266;DP=619;FS=4.346;HRun=0;HaplotypeScore=93.7455;InbreedingCoeff=-0.0184;MQ=82.15;MQ0=0;MQRankSum=-4.187;QD=4.56;ReadPosRankSum=-0.288;VQSLOD=2.1427;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:84.38:0,84,1811	0/0:10,0:10:27.09:0,27,504	0/0:26,0:26:75.19:0,75,1309	0/0:29,0:30:65.27:0,65,1281	0/0:11,0:11:27.09:0,27,512	0/0:23,0:23:66.14:0,66,1118	0/0:25,0:25:75.20:0,75,1304	0/0:27,0:27:75.22:0,75,1379	0/0:24,0:24:72.25:0,72,1366	0/0:16,0:16:48.12:0,48,843	0/0:13,0:13:36.12:0,36,664	0/0:20,0:20:60.21:0,60,1125	0/0:13,0:13:39.11:0,39,705	0/0:28,0:28:81.26:0,81,1499	0/0:23,0:23:69.24:0,69,1290	0/0:18,0:18:54.14:0,54,978	0/0:23,0:23:60.19:0,60,1092	0/1:15,9:24:99:184,0,593	0/0:18,0:18:48.16:0,48,869	0/0:26,0:26:72.25:0,72,1327	0/0:44,0:44:99:0,126,2299	0/0:16,0:16:48.16:0,48,877	0/0:8,0:8:24.08:0,24,433	0/0:33,0:33:99:0,99,1846	0/0:24,0:24:63.12:0,63,1105	0/0:26,0:26:78.27:0,78,1467	0/0:22,0:22:60.20:0,60,1096	0/0:10,0:10:27.05:0,27,475
chr10	58006459	.	ACCCT	A	16019.96	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=19.672;DP=673;FS=4.241;HRun=0;HaplotypeScore=141.2998;InbreedingCoeff=0.9845;MQ=76.51;MQ0=1;MQRankSum=-10.858;QD=49.75;ReadPosRankSum=1.271;VQSLOD=5.9281;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,123,3159	1/1:3,6:9:18.06:359,18,0	0/0:17,0:17:45.15:0,45,1149	0/0:19,0:19:48.16:0,48,1215	0/0:27,0:27:78.27:0,78,2121	0/0:22,0:21:63.22:0,63,1760	0/0:26,0:26:78.23:0,78,2030	1/1:3,28:31:81.25:1546,81,0	1/1:2,18:20:48.16:958,48,0	1/1:1,23:24:69.24:1371,69,0	1/1:2,17:19:45.11:770,45,0	0/0:17,0:17:51.18:0,51,1427	0/0:29,0:29:87.30:0,87,2399	0/0:33,0:33:96.29:0,96,2579	1/1:1,33:34:93.32:1834,93,0	1/1:0,20:20:60.21:1198,60,0	1/1:0,20:20:48.64:959,49,0	0/0:40,0:40:99:0,117,3237	1/1:1,18:19:51.12:946,51,0	1/1:1,26:27:78.14:1374,78,0	1/1:2,29:31:72.01:1115,72,0	0/0:28,0:28:84.29:0,84,2307	0/0:22,0:22:63.22:0,63,1730	0/0:28,0:28:84.29:0,84,2351	1/1:0,19:18:51.09:937,51,0	1/1:1,24:25:72.21:1355,72,0	1/1:0,21:21:60.21:1178,60,0	1/1:0,2:2:6.02:120,6,0
chr10	58006725	.	T	TCC	11324.32	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=18.929;DP=650;FS=60.371;HRun=1;HaplotypeScore=142.1205;InbreedingCoeff=0.9970;MQ=82.30;MQ0=0;MQRankSum=-15.872;QD=41.94;ReadPosRankSum=1.505;VQSLOD=0.9825;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,138,2106	1/1:4,5:9:18.06:345,18,0	0/0:23,0:23:68.26:0,68,991	0/0:28,0:28:75.14:0,75,1054	0/0:28,0:28:81.28:0,81,1239	0/0:20,0:20:60.20:0,60,916	0/0:25,0:25:75.24:0,75,1126	1/1:3,7:10:30.10:541,30,0	1/1:5,16:21:57.19:1044,57,0	1/1:4,14:18:48.16:921,48,0	1/1:7,10:17:27.09:515,27,0	0/0:26,0:26:75.25:0,75,1149	0/0:33,0:33:99:0,99,1418	0/0:26,0:26:78.23:0,78,1150	1/1:2,8:10:18.06:346,18,0	1/1:8,7:15:33.07:581,33,0	1/1:4,19:23:42.14:809,42,0	0/0:48,1:49:99:0,138,2081	1/1:7,16:24:41.85:772,42,0	1/1:5,25:30:66.23:1270,66,0	1/1:2,11:13:24.08:463,24,0	0/0:28,0:28:84.29:0,84,1283	0/0:25,0:25:75.24:0,75,1123	0/0:23,0:23:69.22:0,69,1032	1/1:8,19:27:63.09:1099,63,0	1/1:6,17:23:57.20:1072,57,0	1/1:6,15:22:60.16:1084,60,0	1/1:0,8:8:24.08:462,24,0
chr10	58007244	.	ACAG	A	7253.62	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=16.998;DP=577;FS=6.562;HRun=0;HaplotypeScore=168.3078;InbreedingCoeff=0.9662;MQ=74.67;MQ0=0;MQRankSum=-16.823;QD=25.45;ReadPosRankSum=-1.580;VQSLOD=4.3667;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:84.27:0,84,1704	1/1:1,6:7:18.02:246,18,0	0/0:24,0:23:38.47:0,38,666	0/0:19,0:20:27.35:0,27,565	0/0:20,0:20:48.16:0,48,1010	0/0:17,0:17:45.14:0,45,895	0/0:29,0:29:87.27:0,87,1713	1/1:8,9:17:30.07:421,30,0	1/1:5,17:22:45.15:676,45,0	1/1:11,19:30:48.12:697,48,0	1/1:1,14:15:24.08:361,24,0	0/0:26,0:26:63.20:0,63,1288	0/0:19,0:19:51.18:0,51,1058	0/0:16,0:16:45.15:0,45,943	1/1:8,19:27:45.15:670,45,0	1/1:7,25:32:69.23:1029,69,0	1/1:5,16:21:27.09:406,27,0	0/0:37,0:37:99:0,99,1962	1/1:7,11:18:30.01:382,30,0	1/1:8,10:18:21.03:283,21,0	1/1:3,3:6:8.99:110,9,0	0/0:24,0:24:57.20:0,57,1172	0/0:8,0:8:18.06:0,18,379	0/0:20,0:20:42.13:0,42,841	1/1:6,6:11:9.03:135,9,0	1/1:9,15:24:54.01:710,54,0	1/1:7,24:31:69.23:1037,69,0	1/1:3,2:5:6.02:90,6,0
chr10	58007499	.	A	AC	10857.86	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=18.395;DP=609;FS=3.094;HRun=1;HaplotypeScore=115.4422;InbreedingCoeff=0.9756;MQ=89.70;MQ0=0;MQRankSum=-10.239;QD=38.23;ReadPosRankSum=2.158;VQSLOD=4.7636;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,132,1694	1/1:0,10:10:26.95:392,27,0	0/0:25,0:25:72.18:0,72,893	0/0:29,0:29:68.96:0,69,810	0/0:20,0:20:60.19:0,60,777	0/0:27,0:27:75.24:0,75,974	0/0:17,0:17:51.17:0,51,662	1/1:3,22:24:57.19:839,57,0	1/1:2,22:24:66.22:982,66,0	1/1:4,9:13:30.10:440,30,0	1/1:1,8:9:24.08:347,24,0	0/0:18,0:18:54.18:0,54,700	0/0:18,0:18:42.12:0,42,530	0/0:26,0:26:78.23:0,78,984	1/1:2,23:25:57.15:826,57,0	1/1:0,20:20:54.18:804,54,0	1/1:0,17:17:51.17:764,51,0	0/0:37,0:37:99:0,99,1267	1/1:0,19:19:57.19:853,57,0	1/1:0,13:13:36.12:538,36,0	1/1:2,25:27:66.22:978,66,0	0/0:16,0:16:48.15:0,48,607	0/0:22,0:22:60.19:0,60,778	0/0:25,0:25:75.24:0,75,973	1/1:5,23:28:60.20:883,60,0	1/1:2,21:23:66.22:976,66,0	1/1:1,29:30:81.27:1190,81,0	1/1:0,1:1:3.01:45,3,0
chr10	58007793	.	G	GA	681.28	PASS	AB=0.667;AC=27;AF=0.500;AN=54;BaseQRankSum=11.076;DP=352;FS=23.324;HRun=2;HaplotypeScore=95.3143;InbreedingCoeff=0.8077;MQ=108.95;MQ0=0;MQRankSum=-10.614;QD=13.36;ReadPosRankSum=5.482;VQSLOD=1.3509;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,135,1850	0/1:1,1:2:11.05:11,0,11	0/0:29,0:29:82.03:0,82,1005	0/0:23,0:23:49.68:0,50,770	0/0:26,0:26:78.21:0,78,1052	0/0:18,0:18:54.18:0,54,753	0/0:19,0:19:57.18:0,57,778	./.	1/1:0,5:5:14.66:88,15,0	1/1:0,4:4:11.86:86,12,0	1/1:0,5:5:14.45:79,14,0	0/0:17,0:17:48.16:0,48,666	0/0:18,0:18:48.14:0,48,645	0/0:10,0:10:30.10:0,30,420	1/1:0,2:2:5.83:33,6,0	1/1:0,3:3:8.88:58,9,0	1/1:0,4:4:11.73:70,12,0	0/0:35,0:35:99:0,105,1430	1/1:0,1:1:2.99:23,3,0	1/1:0,3:3:8.73:49,9,0	1/1:0,1:1:3.01:37,3,0	0/0:21,0:21:63.20:0,63,864	0/0:22,0:22:60.18:0,60,815	0/0:18,0:18:54.18:0,54,751	1/1:0,4:4:11.74:71,12,0	1/1:0,9:9:20.80:146,21,0	1/1:0,6:6:17.75:116,18,0	1/1:0,1:1:2.98:22,3,0
chr10	58007958	.	G	GC	277.89	PASS	AB=0.696;AC=20;AF=0.357;AN=56;BaseQRankSum=8.534;DP=380;FS=20.630;HRun=0;HaplotypeScore=86.1161;InbreedingCoeff=0.3946;MQ=111.78;MQ0=0;MQRankSum=-6.282;QD=5.05;ReadPosRankSum=3.871;VQSLOD=1.7791;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,99,1381	0/1:2,4:6:50.18:50,0,55	0/0:30,0:30:42.37:0,42,943	0/0:30,0:30:72.17:0,72,961	0/0:16,0:16:45.15:0,45,628	0/0:21,0:21:63.21:0,63,881	0/0:16,0:16:48.14:0,48,653	0/0:6,0:6:12:0,12,138	1/1:1,3:4:8.89:59,9,0	0/1:2,7:9:15:155,0,15	0/1:3,2:5:0:0,0,0	0/0:25,0:25:72.24:0,72,1005	0/0:21,0:21:63.21:0,63,881	0/0:19,0:19:57.19:0,57,786	1/1:3,0:3:3:25,3,0	1/1:1,1:2:5.95:44,6,0	0/0:5,0:5:2.60:0,3,10	0/0:39,0:39:99:0,111,1522	0/1:3,1:4:12.35:12,0,92	1/1:0,2:2:2.92:17,3,0	1/1:9,1:10:2.90:16,3,0	0/0:19,0:19:51.17:0,51,713	0/0:16,0:16:42.14:0,42,583	0/0:27,0:27:81.27:0,81,1132	1/1:2,1:3:2.90:16,3,0	0/1:2,1:3:16.30:16,0,36	0/1:2,1:3:7.14:7,0,75	1/1:0,1:1:2.99:23,3,0
chr10	58007959	.	ATATG	A	207.08	PASS	AB=0.754;AC=15;AF=0.268;AN=56;BaseQRankSum=8.045;DP=377;FS=12.602;HRun=0;HaplotypeScore=104.4989;InbreedingCoeff=0.1072;MQ=109.92;MQ0=0;MQRankSum=-6.990;QD=4.60;ReadPosRankSum=4.270;VQSLOD=0.7386;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,99,2704	0/1:2,4:6:40.05:40,0,156	0/0:29,0:29:84.25:0,84,2047	0/0:28,0:28:65.73:0,66,1762	0/0:16,0:16:48.15:0,48,1325	0/0:21,0:21:63.22:0,63,1825	0/0:15,0:15:45.15:0,45,1289	0/0:6,0:6:15.05:0,15,379	0/1:1,3:4:8.10:46,0,8	0/1:2,7:9:62.96:124,0,63	0/0:2,2:4:0:0,0,0	0/0:25,0:25:75.24:0,75,2106	0/0:21,0:21:63.22:0,63,1809	0/0:21,0:21:63.18:0,63,1747	0/1:3,0:3:13.97:17,0,14	1/1:1,1:2:5.94:42,6,0	0/1:5,0:5:13.95:20,0,14	0/0:39,0:39:99:0,111,3155	0/1:3,1:4:11.32:11,0,248	1/1:0,2:2:2.90:16,3,0	0/0:9,1:10:2.97:0,3,20	0/0:19,0:19:54.19:0,54,1467	0/0:16,0:16:48.16:0,48,1287	0/0:27,0:27:81.28:0,81,2286	0/1:2,1:3:8.41:8,0,14	0/1:2,1:3:10.18:10,0,138	0/1:2,1:3:7.95:8,0,165	1/1:0,1:1:2.92:17,3,0
chr10	58007967	.	T	TGTA	658.94	PASS	AB=0.691;AC=14;AF=0.250;AN=56;BaseQRankSum=8.117;DP=370;FS=28.718;HRun=0;HaplotypeScore=100.8233;InbreedingCoeff=0.1166;MQ=109.00;MQ0=0;MQRankSum=-6.826;QD=15.69;ReadPosRankSum=3.918;VQSLOD=1.7277;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:74.71:0,75,1316	0/1:2,4:6:93.37:138,0,93	0/0:29,0:29:75.35:0,75,1451	0/0:28,0:28:72.14:0,72,1180	0/0:14,0:14:39.12:0,39,687	0/0:22,0:22:60.21:0,60,1102	0/0:16,0:16:42.13:0,42,752	0/0:7,0:7:18.06:0,18,318	0/1:1,3:4:43.64:115,0,44	0/1:3,7:10:82.47:297,0,82	0/1:2,2:4:0.23:0,0,67	0/0:24,0:24:72.23:0,72,1294	0/0:22,0:22:63.19:0,63,1113	0/0:22,0:22:63.20:0,63,1142	0/0:4,0:4:12:0,12,151	1/1:0,1:1:3.01:42,3,0	0/0:6,0:6:11.70:0,12,203	0/0:36,0:36:99:0,108,1962	0/1:3,1:4:37.50:38,0,155	1/1:0,2:2:3.01:38,3,0	0/0:12,1:13:28.50:0,29,325	0/0:17,0:17:42.14:0,42,768	0/0:13,0:13:35.86:0,36,623	0/0:27,0:27:78.25:0,78,1419	0/1:3,1:4:34.64:35,0,81	0/1:2,1:3:35.54:36,0,103	0/1:2,1:3:30.44:30,0,103	1/1:0,1:1:3.01:41,3,0
chr10	58007970	.	CTGAGAAG	C	1566.68	PASS	AB=0.754;AC=15;AF=0.268;AN=56;BaseQRankSum=7.969;DP=365;FS=14.313;HRun=0;HaplotypeScore=124.1598;InbreedingCoeff=0.0378;MQ=108.79;MQ0=0;MQRankSum=-7.696;QD=27.49;ReadPosRankSum=1.836;VQSLOD=2.2614;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:75.26:0,75,2974	0/1:2,4:6:91.43:292,0,91	0/0:28,0:28:80.78:0,81,2800	0/0:28,0:28:74.96:0,75,2497	0/0:13,0:13:36.12:0,36,1459	0/0:22,0:22:63.22:0,63,2429	0/0:17,0:17:51.18:0,51,2084	0/0:7,0:7:18.06:0,18,437	0/1:1,3:4:46.04:224,0,46	0/1:3,7:10:99:514,0,102	0/0:2,2:4:8.55:0,9,86	0/0:24,0:24:72.25:0,72,2942	0/0:24,0:24:72.25:0,72,2913	0/0:21,0:21:63.20:0,63,2407	0/0:4,0:4:12.04:0,12,196	1/1:0,1:1:3.01:79,3,0	0/1:6,0:6:52.72:53,0,178	0/0:36,0:36:99:0,105,4130	0/1:3,1:4:65.76:66,0,228	1/1:0,2:2:3.01:78,3,0	0/1:12,1:13:99:105,0,413	0/0:15,0:15:42.14:0,42,1642	0/0:11,0:11:33.11:0,33,1286	0/0:27,0:27:81.26:0,81,3169	0/1:3,1:4:86.22:102,0,86	0/1:2,1:3:68.79:69,0,106	0/1:2,1:3:68.67:69,0,117	1/1:0,1:1:3.01:74,3,0
chr10	58007981	.	G	GTACTCTTAC	10346.16	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=11.637;DP=403;FS=43.610;HRun=0;HaplotypeScore=136.2708;InbreedingCoeff=0.9157;MQ=105.84;MQ0=0;MQRankSum=-12.510;QD=96.69;ReadPosRankSum=-1.273;VQSLOD=2.7027;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:84.29:0,84,2436	1/1:6,2:8:24.08:1008,24,0	0/0:32,0:32:72.14:0,72,2090	0/0:26,0:26:65.84:0,66,1847	0/0:12,0:12:36.12:0,36,1095	0/0:18,0:18:54.19:0,54,1632	0/0:19,0:19:57.20:0,57,1756	1/1:11,5:19:48.16:1845,48,0	1/1:4,1:6:12.04:475,12,0	1/1:7,2:9:27.09:1156,27,0	1/1:3,1:4:9.03:318,9,0	0/0:26,0:26:78.25:0,78,2301	0/0:24,0:24:72.23:0,72,2159	0/0:23,0:23:69.22:0,69,2043	1/1:1,4:5:15.05:716,15,0	1/1:3,0:3:3.01:109,3,0	1/1:1,5:6:15.05:732,15,0	0/0:34,0:34:99:0,99,3057	1/1:3,2:7:18.05:626,18,0	1/1:5,0:7:12.04:322,12,0	1/1:7,8:16:33.11:1377,33,0	0/0:17,0:17:51.16:0,51,1428	0/0:10,0:10:30.10:0,30,863	0/0:26,0:26:75.22:0,75,2114	1/1:1,2:5:12.04:547,12,0	1/1:2,2:6:15:603,15,0	1/1:3,2:5:9.03:403,9,0	1/1:1,0:1:3.01:110,3,0
chr10	58008150	.	C	CCAGACCGAT	6842.28	PASS	AC=26;AF=0.500;AN=52;BaseQRankSum=10.403;DP=418;FS=119.717;HRun=0;HaplotypeScore=123.4898;InbreedingCoeff=0.8846;MQ=99.77;MQ0=0;MQRankSum=-11.003;QD=100.62;ReadPosRankSum=-0.516;VQSLOD=1.5963;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:93.32:0,93,2857	1/1:0,1:1:3.01:148,3,0	0/0:33,0:33:96.27:0,96,2594	0/0:29,0:29:81.27:0,81,2403	0/0:25,0:25:72.23:0,72,2059	0/0:23,0:23:66.21:0,66,2017	0/0:23,0:23:69.24:0,69,2040	1/1:6,2:9:18.03:750,18,0	1/1:1,3:4:9.03:445,9,0	1/1:4,5:11:33.09:1388,33,0	1/1:1,2:4:6.02:296,6,0	0/0:33,0:33:96.31:0,96,2885	0/0:30,0:30:90.30:0,90,2649	0/0:30,0:30:90.30:0,90,2659	1/1:1,1:2:6.02:286,6,0	1/1:1,3:4:9.03:445,9,0	1/1:1,1:2:6.02:274,6,0	0/0:27,0:27:43.52:0,44,1984	1/1:4,2:6:15.05:699,15,0	1/1:1,3:5:12.04:587,12,0	1/1:3,2:7:12.04:509,12,0	0/0:24,0:24:69.22:0,69,2011	0/0:17,0:17:51.18:0,51,1565	0/0:22,0:22:66.21:0,66,1966	1/1:3,2:5:9.03:438,9,0	1/1:2,3:8:11.61:577,12,0	./.	./.
chr10	58009224	.	C	CA	10139.45	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=18.914;DP=628;FS=39.498;HRun=4;HaplotypeScore=138.5309;InbreedingCoeff=0.9935;MQ=62.49;MQ0=1;MQRankSum=-11.836;QD=34.96;ReadPosRankSum=-1.020;VQSLOD=1.3162;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:63.13:0,63,697	1/1:0,4:4:12.04:164,12,0	0/0:32,0:29:69.18:0,69,761	0/0:36,1:35:38.60:0,39,793	0/0:26,0:26:78.22:0,78,885	0/0:20,0:20:60.17:0,60,681	0/0:18,0:18:51.13:0,51,569	1/1:2,24:24:63.21:858,63,0	1/1:1,12:13:36.08:471,36,0	1/1:2,30:32:90.28:1198,90,0	1/1:3,22:25:63.21:860,63,0	0/0:26,0:26:72.20:0,72,817	0/0:26,0:26:66.17:0,66,738	0/0:30,0:30:78.22:0,78,884	1/1:0,24:24:66.17:867,66,0	1/1:1,19:20:54.18:735,54,0	1/1:1,17:18:48.16:647,48,0	0/0:32,0:32:60.67:0,61,946	1/1:3,14:17:45.12:595,45,0	1/1:3,24:27:63.21:860,63,0	1/1:1,8:9:15.05:205,15,0	0/0:33,0:33:93.26:0,93,1054	0/0:19,0:19:57.14:0,57,629	0/0:17,0:17:45.13:0,45,510	1/1:2,11:13:33.11:451,33,0	1/1:3,25:28:75.23:999,75,0	1/1:2,20:22:60.20:819,60,0	1/1:2,10:12:30.10:410,30,0
chr10	58009258	.	A	AG	2496.21	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=18.423;DP=618;FS=14.227;HRun=0;HaplotypeScore=139.5532;InbreedingCoeff=0.9765;MQ=65.04;MQ0=3;MQRankSum=-11.162;QD=9.04;ReadPosRankSum=1.726;VQSLOD=3.1745;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:72.17:0,72,953	1/1:2,1:3:5.91:61,6,0	0/0:33,0:31:90.17:0,90,1132	0/0:31,0:28:57.47:0,57,780	0/0:30,0:30:84.22:0,84,1116	0/0:24,0:24:72.21:0,72,956	0/0:15,0:15:45.13:0,45,595	1/1:19,3:21:39.58:229,40,0	1/1:9,2:11:25.38:155,25,0	1/1:31,1:32:57.99:355,58,0	1/1:20,1:21:18.78:85,19,0	0/0:31,0:31:93.26:0,93,1233	0/0:24,0:24:72.23:0,72,988	0/0:27,0:27:81.27:0,81,1130	1/1:24,0:24:34.71:177,35,0	1/1:23,1:24:43.01:242,43,0	1/1:14,0:14:37.79:214,38,0	0/0:36,0:36:99:0,102,1292	1/1:13,3:16:36.95:280,37,0	1/1:24,1:25:28.90:152,29,0	1/1:9,0:9:20.82:166,21,0	0/0:29,0:29:87.25:0,87,1162	0/0:16,0:16:48.13:0,48,651	0/0:17,0:17:44.82:0,45,626	1/1:13,2:15:20.68:116,21,0	1/1:30,0:30:62.28:331,62,0	1/1:22,0:22:26.31:96,26,0	1/1:7,1:8:10.21:67,10,0
chr10	58009551	.	AG	A	10284.40	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=19.191;DP=643;FS=3.942;HRun=1;HaplotypeScore=118.8670;InbreedingCoeff=0.9914;MQ=78.71;MQ0=0;MQRankSum=-11.387;QD=37.53;ReadPosRankSum=2.121;VQSLOD=4.6514;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,99,1559	1/1:0,3:3:9.03:126,9,0	0/0:24,0:24:69.21:0,69,1035	0/0:25,0:25:67.78:0,68,1024	0/0:34,0:34:81.28:0,81,1290	0/0:31,0:31:93.32:0,93,1487	0/0:15,0:15:45.15:0,45,719	1/1:0,23:23:69.20:943,69,0	1/1:0,17:17:51.14:692,51,0	1/1:0,25:25:69.23:964,69,0	1/1:0,27:27:72.15:961,72,0	0/0:18,0:18:54.18:0,54,863	0/0:27,0:27:81.26:0,81,1268	0/0:32,0:32:96.31:0,96,1510	1/1:0,17:17:51.17:713,51,0	1/1:0,17:17:48.16:671,48,0	1/1:0,14:14:33.11:461,33,0	0/0:31,0:31:87.30:0,87,1387	1/1:0,19:18:54.18:752,54,0	1/1:0,23:23:63.21:880,63,0	1/1:0,16:16:45.11:607,45,0	0/0:40,0:40:99:0,99,1527	0/0:33,0:33:84.29:0,84,1343	0/0:22,0:22:63.21:0,63,1007	1/1:0,18:18:39.13:545,39,0	1/1:0,23:23:63.21:880,63,0	1/1:0,21:21:60.16:816,60,0	1/1:0,11:11:21.04:273,21,0
chr10	58009908	.	A	AC	1294.67	PASS	AB=0.938;AC=17;AF=0.405;AN=42;BaseQRankSum=8.254;DP=381;FS=68.888;HRun=0;HaplotypeScore=42.7539;InbreedingCoeff=0.7575;MQ=49.67;MQ0=16;MQRankSum=-8.301;QD=21.58;ReadPosRankSum=-0.791;VQSLOD=-0.1645;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:39:87.29:0,87,1214	./.	0/0:17,0:3:9.03:0,9,112	0/0:12,0:1:0:0,0,0	0/0:37,0:37:90.23:0,90,1213	0/0:26,0:26:45.13:0,45,611	0/0:18,0:17:39.13:0,39,542	./.	./.	1/1:0,9:9:24.08:377,24,0	1/1:0,8:8:15.01:210,15,0	0/0:31,0:31:72.20:0,72,952	0/0:26,0:26:60.16:0,60,788	0/0:20,0:20:45.15:0,45,628	1/1:0,3:3:6.02:95,6,0	./.	1/1:1,1:1:3.01:48,3,0	0/0:26,0:25:66.15:0,66,878	./.	1/1:0,7:7:18.06:286,18,0	./.	0/0:26,0:23:60.20:0,60,837	0/0:31,0:31:84.28:0,84,1167	0/1:14,1:15:14.80:15,0,386	1/1:0,6:5:12.04:190,12,0	1/1:0,5:5:12.04:191,12,0	1/1:1,4:4:3.01:48,3,0	./.
chr10	58013111	.	AT	A	45.56	PASS	AC=2;AF=0.071;AN=28;BaseQRankSum=4.012;DP=352;FS=18.862;HRun=1;HaplotypeScore=64.4538;InbreedingCoeff=0.7903;MQ=56.53;MQ0=15;MQRankSum=-4.037;QD=11.39;ReadPosRankSum=2.761;VQSLOD=0.4290;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,120,1878	./.	0/0:16,0:3:8.99:0,9,98	0/0:16,0:2:5.97:0,6,62	0/0:34,3:36:39.65:0,40,1156	0/0:33,0:33:93.30:0,93,1463	0/0:23,0:23:60.07:0,60,845	./.	./.	./.	./.	0/0:18,0:18:51.16:0,51,789	0/0:16,0:16:48.16:0,48,767	0/0:26,0:26:72.24:0,72,1139	./.	./.	./.	0/0:41,2:42:75.42:0,75,1646	./.	./.	./.	0/0:25,0:25:69.17:0,69,1058	0/0:31,0:29:66.22:0,66,1032	0/0:16,1:17:34.20:0,34,750	./.	./.	1/1:1,3:3:9.03:125,9,0	./.
chr10	58013940	.	A	AAACT	8063.46	PASS	AC=28;AF=0.519;AN=54;BaseQRankSum=14.718;DP=387;FS=252.803;HRun=0;HaplotypeScore=123.3967;InbreedingCoeff=0.9598;MQ=72.95;MQ0=5;MQRankSum=-14.422;QD=61.09;ReadPosRankSum=1.196;VQSLOD=0.0912;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:63.22:0,63,1146	1/1:1,5:6:15.05:381,15,0	0/0:27,0:17:47.72:0,48,786	0/0:17,0:10:14.17:0,14,289	0/0:24,0:24:66.10:0,66,1026	0/0:16,0:16:48.07:0,48,824	0/0:20,0:20:57.20:0,57,1052	1/1:3,7:11:32.96:678,33,0	1/1:1,5:6:15.05:381,15,0	1/1:4,11:15:45.04:996,45,0	1/1:6,11:14:42.03:877,42,0	0/0:21,0:21:57.15:0,57,1026	0/0:15,0:15:45.15:0,45,839	0/0:12,0:12:35.86:0,36,627	1/1:1,8:9:27.02:627,27,0	1/1:1,4:5:14.98:301,15,0	1/1:0,1:1:3.01:77,3,0	0/0:32,0:32:90.31:0,90,1640	1/1:0,4:4:12.04:301,12,0	1/1:2,12:14:36.12:913,36,0	./.	0/0:11,0:11:33.10:0,33,546	0/0:26,0:26:66.16:0,66,1110	0/0:12,0:12:36.04:0,36,632	1/1:4,6:8:20.99:474,21,0	1/1:3,11:13:30.10:759,30,0	1/1:2,9:10:30.10:764,30,0	1/1:1,7:8:21.07:534,21,0
chr10	58014952	.	CTG	C	2999.65	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=12.134;DP=382;FS=2.643;HRun=0;HaplotypeScore=68.3078;InbreedingCoeff=0.9272;MQ=78.38;MQ0=0;MQRankSum=-11.463;QD=27.27;ReadPosRankSum=-0.064;VQSLOD=4.5610;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:99:0,99,1718	0/0:5,0:5:15.05:0,15,255	0/0:23,0:23:52:0,52,901	0/0:24,0:23:63.05:0,63,1061	0/0:14,0:14:42.03:0,42,660	0/0:12,0:12:36.12:0,36,631	0/0:16,0:16:48.16:0,48,864	0/0:14,0:14:39.12:0,39,658	1/1:2,10:12:33.10:445,33,0	1/1:3,5:8:18.06:249,18,0	1/1:1,3:4:3.01:42,3,0	0/0:16,0:16:48.16:0,48,854	0/0:13,0:13:39.13:0,39,695	0/0:16,0:16:45.15:0,45,806	1/1:2,13:15:42.11:555,42,0	1/1:3,10:13:30.10:419,30,0	0/0:16,0:16:48.15:0,48,835	0/0:26,0:26:69.11:0,69,1124	1/1:2,6:8:12.04:162,12,0	1/1:0,4:4:3.48:43,3,0	1/1:5,11:16:20.27:230,20,0	0/0:9,0:9:27.09:0,27,481	0/0:10,0:10:27.09:0,27,484	0/0:25,0:25:69.24:0,69,1243	1/1:1,4:5:9.03:126,9,0	1/1:1,9:10:30.09:401,30,0	1/1:1,10:11:30.10:419,30,0	1/1:0,4:4:9.03:126,9,0
chr10	58014969	.	T	TGG	2628.64	PASS	AC=22;AF=0.407;AN=54;BaseQRankSum=9.066;DP=377;FS=11.139;HRun=7;HaplotypeScore=72.8426;InbreedingCoeff=0.9338;MQ=74.55;MQ0=0;MQRankSum=-9.981;QD=24.57;ReadPosRankSum=0.364;VQSLOD=1.5548;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:20:48.59:0,49,549	0/0:7,0:7:18.05:0,18,210	0/0:22,0:20:21.68:0,22,349	0/0:29,0:26:57.09:0,57,624	0/0:12,0:12:33.09:0,33,384	0/0:14,0:14:39.11:0,39,454	0/0:18,0:18:48.11:0,48,547	0/0:16,0:16:39.11:0,39,454	1/1:4,11:16:30.10:472,30,0	1/1:1,6:7:18.06:295,18,0	1/1:1,1:2:3.01:49,3,0	0/0:17,0:17:45.13:0,45,524	0/0:14,0:14:33.09:0,33,382	0/0:18,0:18:54.16:0,54,629	1/1:4,11:15:36.12:590,36,0	1/1:0,0:12:27.45:96,27,0	0/0:16,0:16:42.10:0,42,476	0/0:21,0:21:60.15:0,60,686	1/1:5,3:8:15.05:244,15,0	1/1:1,2:3:3.48:48,3,0	1/1:4,10:17:11.85:172,12,0	0/0:9,0:9:27.08:0,27,314	0/0:9,0:9:24.07:0,24,279	0/0:25,0:25:60.15:0,60,699	1/1:3,3:6:12.02:150,12,0	1/1:3,7:10:21.07:344,21,0	1/1:4,7:11:24.08:381,24,0	./.
chr10	58016774	.	TGG	T	5987.56	PASS	AB=0.957;AC=31;AF=0.554;AN=56;BaseQRankSum=16.431;DP=554;FS=2.561;HRun=3;HaplotypeScore=135.3047;InbreedingCoeff=0.9470;MQ=73.11;MQ0=3;MQRankSum=-12.454;QD=20.16;ReadPosRankSum=4.486;VQSLOD=2.7601;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:35.98:0,36,541	1/1:5,1:6:11.95:150,12,0	0/0:35,0:27:47.70:0,48,940	0/1:21,1:15:2.33:2,0,411	0/0:22,0:22:53.24:0,53,808	0/0:18,0:18:54.14:0,54,947	0/0:12,0:12:29.87:0,30,403	1/1:11,9:20:38.21:436,38,0	1/1:17,2:19:56.40:488,56,0	1/1:26,3:29:66.96:641,67,0	1/1:21,1:21:50.53:501,51,0	0/0:15,0:15:36.10:0,36,557	0/0:8,0:8:24.06:0,24,424	0/0:17,0:17:51:0,51,744	1/1:12,2:14:34.79:302,35,0	1/1:18,1:19:54.98:476,55,0	1/1:17,4:21:53.53:526,54,0	0/0:34,0:33:89.89:0,90,1397	1/1:15,2:17:40.08:316,40,0	1/1:23,2:25:60.92:468,61,0	1/1:15,1:15:23.14:226,23,0	0/0:17,0:17:50.96:0,51,773	0/0:22,0:22:63.14:0,63,1102	0/0:20,0:20:45.60:0,46,758	1/1:18,1:19:47.50:414,48,0	1/1:20,3:23:59.40:557,59,0	1/1:20,0:20:48.77:369,49,0	1/1:5,0:5:14.55:116,15,0
chr10	58016775	.	G	GT	1418.22	PASS	AB=0.917;AC=28;AF=0.500;AN=56;BaseQRankSum=13.029;DP=545;FS=0.419;HRun=1;HaplotypeScore=148.4226;InbreedingCoeff=0.8398;MQ=72.91;MQ0=3;MQRankSum=-9.091;QD=5.43;ReadPosRankSum=6.502;VQSLOD=0.4226;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:32.92:0,33,410	0/1:5,0:5:0.09:7,0,0	0/0:35,0:26:63.50:0,63,766	0/0:22,0:15:25.24:0,25,326	0/0:23,0:23:41.19:0,41,524	0/0:18,0:18:54.06:0,54,708	0/0:12,0:12:25.07:0,25,273	1/1:16,0:18:2.77:53,3,0	1/1:18,1:19:21.84:144,22,0	1/1:30,0:30:19.07:138,19,0	1/1:20,0:19:22.01:125,22,0	0/0:15,0:15:33.09:0,33,420	0/0:9,0:9:24.04:0,24,312	0/0:17,0:17:45.09:0,45,531	1/1:12,1:13:3.29:71,3,0	1/1:19,0:19:35.48:187,35,0	1/1:16,0:18:13.43:73,13,0	0/0:35,0:33:86.83:0,87,1092	1/1:15,0:15:15.84:137,16,0	1/1:22,0:23:11.07:130,11,0	1/1:15,0:14:8.46:52,8,0	0/0:17,0:17:44.60:0,45,523	0/0:22,0:22:60.17:0,60,776	0/0:21,0:21:42.09:0,42,565	1/1:17,1:19:24.29:141,24,0	1/1:21,0:21:30.39:185,30,0	1/1:19,0:20:15.52:145,16,0	0/1:4,1:5:5.52:45,0,6
chr10	58016788	.	T	TC	5394.54	PASS	AB=0.756;AC=26;AF=0.464;AN=56;BaseQRankSum=12.901;DP=628;FS=8.462;HRun=0;HaplotypeScore=138.8697;InbreedingCoeff=0.6685;MQ=66.36;MQ0=4;MQRankSum=-6.589;QD=17.02;ReadPosRankSum=7.143;VQSLOD=6.7135;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:42.54:0,43,319	0/1:2,0:3:17.89:23,0,18	0/0:29,0:19:11.63:0,12,234	0/0:28,0:19:30.49:0,30,228	0/0:24,0:24:54.65:0,55,346	0/0:22,0:22:66:0,66,699	0/0:11,0:11:29.87:0,30,253	0/1:30,0:32:58.85:299,0,59	1/1:16,9:25:42.39:497,42,0	1/1:22,16:38:67.37:827,67,0	1/1:1,20:21:49.66:445,50,0	0/0:15,0:15:34.05:0,34,320	0/0:15,0:15:44.26:0,44,411	0/0:15,0:15:40.86:0,41,353	1/1:4,14:18:29.95:270,30,0	1/1:9,13:22:60.20:590,60,0	0/1:11,0:17:44.15:104,0,44	0/0:34,0:33:89.86:0,90,749	1/1:3,16:19:25.97:435,26,0	1/1:5,19:24:24.15:441,24,0	1/1:3,13:15:8.80:176,9,0	0/0:20,0:20:57.26:0,57,545	0/0:27,0:27:74.90:0,75,724	0/0:21,0:21:44.59:0,45,511	1/1:4,16:20:6.18:285,6,0	1/1:5,24:29:60.19:621,60,0	0/1:8,17:25:22.13:309,0,22	1/1:3,2:5:4.83:72,5,0
chr10	58016827	.	GCA	G	2558.91	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=4.001;DP=594;FS=0.000;HRun=0;HaplotypeScore=146.4299;InbreedingCoeff=0.9812;MQ=70.84;MQ0=1;MQRankSum=-5.722;QD=35.54;ReadPosRankSum=-2.816;VQSLOD=4.3112;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:90.31:0,90,1639	1/1:0,6:5:12.04:176,12,0	0/0:18,0:17:36.12:0,36,622	0/0:23,0:20:25.68:0,26,617	0/0:20,0:20:60.21:0,60,1123	0/0:21,0:21:60.19:0,60,1071	0/0:18,0:18:54.19:0,54,1003	1/1:0,36:36:99:1500,105,0	0/0:24,0:24:66.23:0,66,1235	0/0:39,0:38:99:0,105,1962	0/0:20,0:19:51.17:0,51,949	0/0:14,0:14:42.14:0,42,786	0/0:22,0:22:66.23:0,66,1236	0/0:18,0:18:54.19:0,54,1002	0/0:17,0:17:36.12:0,36,667	1/1:2,18:20:51.16:731,51,0	1/1:1,9:10:21.07:309,21,0	0/0:26,0:26:78.27:0,78,1453	0/0:18,0:18:51.17:0,51,953	0/0:30,0:30:75.26:0,75,1368	0/0:26,0:25:51.17:0,51,944	0/0:20,0:20:60.21:0,60,1108	0/0:19,0:19:57.20:0,57,1067	0/0:15,0:15:42.02:0,42,779	0/0:20,0:20:45.15:0,45,835	0/0:28,0:28:78.27:0,78,1452	0/0:19,0:19:41.96:0,42,768	0/0:4,0:4:12.04:0,12,224
chr10	58016900	.	C	CA	14490.61	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=17.711;DP=657;FS=4.327;HRun=1;HaplotypeScore=114.8490;InbreedingCoeff=0.9918;MQ=85.12;MQ0=0;MQRankSum=-7.382;QD=42.37;ReadPosRankSum=1.535;VQSLOD=4.4236;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,138,1927	1/1:1,11:12:33.09:503,33,0	0/0:21,0:21:49.84:0,50,760	0/0:25,0:25:66.13:0,66,880	0/0:22,0:22:60.20:0,60,835	0/0:21,0:21:60.16:0,60,816	0/0:21,0:21:57.19:0,57,797	1/1:4,26:30:90.19:1333,90,0	1/1:0,32:32:84.29:1342,84,0	1/1:0,32:32:87.28:1368,87,0	1/1:1,13:14:27.09:432,27,0	0/0:23,0:23:66.21:0,66,904	0/0:16,0:16:42.14:0,42,585	0/0:21,0:21:60.20:0,60,838	1/1:0,22:22:60.20:959,60,0	1/1:4,22:26:63.21:1006,63,0	1/1:1,22:23:57.19:909,57,0	0/0:25,0:25:72.24:0,72,1006	1/1:0,20:20:57.19:910,57,0	1/1:2,26:28:75.26:1199,75,0	1/1:1,33:34:90.31:1439,90,0	0/0:20,0:20:57.19:0,57,797	0/0:21,0:21:57.19:0,57,792	0/0:30,0:30:84.28:0,84,1172	1/1:0,27:27:75.26:1196,75,0	1/1:1,23:24:66.21:1032,66,0	1/1:0,15:15:45.15:719,45,0	1/1:0,3:3:9.03:144,9,0
chr10	58017113	.	G	GC	12565.51	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=19.239;DP=683;FS=4.743;HRun=1;HaplotypeScore=132.1263;InbreedingCoeff=0.9934;MQ=85.94;MQ0=0;MQRankSum=-14.337;QD=38.78;ReadPosRankSum=-1.356;VQSLOD=3.9923;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,147,1894	1/1:0,5:5:15.05:224,15,0	0/0:24,0:24:60.19:0,60,756	0/0:30,0:30:79.42:0,79,1006	0/0:26,0:26:78.21:0,78,980	0/0:19,0:19:57.16:0,57,723	0/0:22,0:22:63.20:0,63,815	1/1:3,29:32:84.28:1252,84,0	1/1:2,29:31:93.30:1360,93,0	1/1:6,23:29:66.22:980,66,0	1/1:0,19:19:48.16:706,48,0	0/0:21,0:21:63.19:0,63,804	0/0:15,0:15:45.15:0,45,584	0/0:18,0:18:54.13:0,54,658	1/1:3,26:29:84.28:1247,84,0	1/1:4,25:29:75.25:1122,75,0	1/1:0,12:12:33.11:483,33,0	0/0:42,0:42:99:0,126,1633	1/1:2,14:17:48.12:688,48,0	1/1:2,24:26:72.24:1066,72,0	1/1:2,15:17:27.09:404,27,0	0/0:26,0:26:75.23:0,75,946	0/0:30,0:30:78.17:0,78,985	0/0:37,0:37:99:0,105,1363	1/1:7,25:32:72.24:1059,72,0	1/1:1,18:19:57.15:828,57,0	1/1:2,21:23:66.22:967,66,0	1/1:0,4:4:12.04:180,12,0
chr10	58017140	.	AG	A	11191.46	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=17.193;DP=670;FS=4.224;HRun=1;HaplotypeScore=109.9668;InbreedingCoeff=0.9755;MQ=81.73;MQ0=0;MQRankSum=-13.120;QD=37.94;ReadPosRankSum=-1.328;VQSLOD=4.2475;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,166,2609	1/1:0,8:8:21.07:293,21,0	0/0:25,0:25:60.43:0,60,946	0/0:22,0:22:60.85:0,61,807	0/0:26,0:26:75.23:0,75,1147	0/0:24,0:24:72.25:0,72,1151	0/0:25,0:25:75.22:0,75,1150	1/1:0,32:32:87.28:1199,87,0	1/1:0,26:26:75.25:1047,75,0	1/1:0,21:21:57.19:797,57,0	1/1:0,17:17:45.15:628,45,0	0/0:29,0:29:84.24:0,84,1284	0/0:15,0:15:45.15:0,45,712	0/0:21,0:21:63.21:0,63,1007	1/1:0,20:20:60.20:837,60,0	1/1:0,20:20:57.19:796,57,0	1/1:0,14:14:30.10:419,30,0	0/0:43,0:43:99:0,129,2016	1/1:3,14:17:48.11:632,48,0	1/1:2,30:32:84.27:1155,84,0	1/1:0,15:15:42.14:586,42,0	0/0:32,0:32:96.27:0,96,1483	0/0:21,0:21:60.20:0,60,952	0/0:37,0:37:99:0,108,1698	1/1:0,29:29:81.27:1129,81,0	1/1:0,19:19:57.19:795,57,0	1/1:1,22:23:60.20:838,60,0	1/1:0,2:2:3.01:42,3,0
chr10	58017743	.	TTG	T	4245.03	PASS	AB=0.890;AC=33;AF=0.589;AN=56;BaseQRankSum=8.400;DP=1043;FS=45.072;HRun=0;HaplotypeScore=358.9313;InbreedingCoeff=-0.1048;MQ=41.35;MQ0=18;MQRankSum=-3.069;QD=4.94;ReadPosRankSum=1.988;VQSLOD=2.9230;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:35,5:40:61.83:62,0,986	0/1:18,0:27:24.01:55,0,24	0/0:59,0:24:15:0,15,170	0/0:54,0:36:52.99:0,53,785	0/1:44,4:63:99:131,0,491	0/0:32,0:36:41.16:0,41,671	0/1:21,2:23:32.57:33,0,432	0/1:30,0:41:29.07:75,0,29	1/1:16,15:34:28.08:449,28,0	0/1:36,11:53:23.61:327,0,24	0/1:31,5:41:26.08:126,0,26	0/1:37,2:41:5.69:6,0,996	0/0:33,0:35:64.58:0,65,1003	0/1:17,2:20:46.48:46,0,250	1/1:8,11:24:19.79:351,20,0	1/1:19,0:34:40.11:194,40,0	1/1:12,0:15:8.48:42,8,0	0/1:28,3:31:26.10:26,0,1009	0/1:17,1:13:1.79:29,0,2	1/1:49,11:63:32.52:396,33,0	1/1:7,11:18:21.06:250,21,0	0/1:45,3:60:91.56:92,0,465	0/1:34,2:46:61.38:61,0,370	0/1:27,3:31:35.05:35,0,917	1/1:40,16:58:12.38:453,12,0	0/1:21,15:40:71.94:499,0,72	1/1:13,12:28:37.74:472,38,0	1/1:5,1:7:0.84:35,1,0
chr10	58018049	.	A	AC	15201.60	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-2.638;DP=767;FS=9.166;HRun=3;HaplotypeScore=99.9555;InbreedingCoeff=0.9981;MQ=65.64;MQ0=0;MQRankSum=-2.171;QD=35.85;ReadPosRankSum=0.858;VQSLOD=4.4826;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,114,1365	1/1:0,7:7:18.06:252,18,0	0/0:22,0:20:48.13:0,48,562	0/0:16,0:13:26.15:0,26,385	0/0:18,0:18:48.13:0,48,559	0/0:19,0:19:57.17:0,57,684	0/0:20,0:20:57.14:0,57,659	1/1:3,42:45:99:1684,123,0	1/1:0,26:26:78.26:1092,78,0	1/1:4,26:30:81.25:1107,81,0	1/1:1,18:19:39.13:543,39,0	0/0:31,0:31:87.27:0,87,1043	0/0:19,0:19:51.16:0,51,612	0/0:25,0:25:75.23:0,75,899	1/1:2,27:29:81.27:1134,81,0	1/1:0,30:30:81.27:1134,81,0	1/1:3,33:36:90.30:1260,90,0	0/0:73,0:73:99:0,199,2345	1/1:2,28:29:75.23:1030,75,0	1/1:0,26:26:54.18:754,54,0	1/1:3,67:70:99:2640,190,0	0/0:15,0:15:33.10:0,33,394	0/0:16,0:16:33.10:0,33,394	0/0:28,0:28:75.23:0,75,899	1/1:3,27:29:75.16:993,75,0	1/1:2,14:16:39.11:527,39,0	1/1:0,21:21:54.18:755,54,0	1/1:2,7:9:21.07:294,21,0
chr10	58020118	.	A	ACTG	4470.30	PASS	AB=0.667;AC=5;AF=0.089;AN=56;BaseQRankSum=6.940;DP=633;FS=2.114;HRun=0;HaplotypeScore=97.8777;InbreedingCoeff=0.7794;MQ=84.87;MQ0=0;MQRankSum=-4.818;QD=42.98;ReadPosRankSum=-0.727;VQSLOD=6.2218;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,22:26:72.24:1544,72,0	0/0:16,0:16:48.16:0,48,818	0/0:19,0:19:28.33:0,28,701	0/0:22,0:22:53.31:0,53,920	1/1:4,31:36:93.32:2066,93,0	0/0:23,0:23:63.19:0,63,1019	0/0:16,0:16:48.16:0,48,786	0/0:33,0:33:90.28:0,90,1434	0/0:18,0:18:51.16:0,51,842	0/0:23,0:23:69.24:0,69,1152	0/0:24,0:24:63.21:0,63,1052	0/0:18,0:18:51.17:0,51,861	0/0:23,0:23:69.24:0,69,1176	0/0:23,0:23:66.21:0,66,1098	0/0:18,0:18:54.18:0,54,898	0/0:15,0:15:45.15:0,45,743	0/0:33,0:33:96.27:0,96,1543	0/1:21,21:42:99:860,0,960	0/0:15,0:15:45.15:0,45,766	0/0:28,0:28:81.26:0,81,1344	0/0:22,0:22:66.23:0,66,1121	0/0:20,0:20:60.21:0,60,1023	0/0:29,0:29:81.26:0,81,1380	0/0:13,0:13:39.13:0,39,665	0/0:20,0:20:57.17:0,57,944	0/0:26,0:26:78.26:0,78,1303	0/0:24,0:24:72.20:0,72,1124	0/0:8,0:8:24.08:0,24,409
chr10	58020804	.	T	TC	4230.24	PASS	AB=0.627;AC=26;AF=0.464;AN=56;BaseQRankSum=19.261;DP=626;FS=4.787;HRun=2;HaplotypeScore=181.4019;InbreedingCoeff=0.7285;MQ=83.86;MQ0=0;MQRankSum=-18.582;QD=16.99;ReadPosRankSum=3.490;VQSLOD=5.1207;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,150,2074	1/1:2,6:8:20.91:160,21,0	0/0:19,0:19:57.14:0,57,760	0/0:32,0:32:84.33:0,84,1226	0/0:26,0:26:72.23:0,72,990	0/0:23,0:23:69.21:0,69,932	0/0:27,0:27:81.26:0,81,1111	0/1:7,13:20:23.64:287,0,24	1/1:7,17:24:39.48:402,39,0	1/1:2,21:23:36.91:498,37,0	1/1:3,14:18:41.78:309,42,0	0/0:26,0:26:75.23:0,75,1028	0/0:19,0:19:57.17:0,57,765	0/0:22,0:22:66.21:0,66,903	1/1:3,27:30:39.62:556,40,0	1/1:3,15:18:27.31:328,27,0	0/1:7,9:16:6.60:113,0,7	0/0:56,0:56:99:0,166,2307	0/1:3,4:7:7.59:104,0,8	1/1:4,8:12:23.90:184,24,0	1/1:1,7:8:9.11:88,9,0	0/0:18,0:18:51.17:0,51,713	0/0:31,0:31:90.28:0,90,1220	0/0:27,0:27:81.27:0,81,1132	1/1:5,18:23:53.78:414,54,0	1/1:2,15:17:32.53:374,33,0	1/1:3,17:20:36.71:376,37,0	0/1:2,3:5:21.55:36,0,22
chr10	58020805	.	T	TGTG	11567.26	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=20.210;DP=672;FS=0.613;HRun=0;HaplotypeScore=207.0621;InbreedingCoeff=0.9909;MQ=81.26;MQ0=0;MQRankSum=-19.842;QD=38.82;ReadPosRankSum=-0.226;VQSLOD=4.8971;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,151,2751	1/1:4,6:10:24.08:389,24,0	0/0:20,0:20:57.15:0,57,981	0/0:31,0:31:93.28:0,93,1644	0/0:24,0:24:72.24:0,72,1313	0/0:23,0:23:69.18:0,69,1218	0/0:27,0:27:81.27:0,81,1457	1/1:11,13:24:17.13:1007,17,0	1/1:11,17:28:65.88:1012,66,0	1/1:5,21:26:78.27:1327,78,0	1/1:11,14:26:45.15:718,45,0	0/0:25,0:25:75.25:0,75,1346	0/0:19,0:19:57.16:0,57,981	0/0:23,0:23:65.08:0,65,1178	1/1:5,27:32:84.27:1345,84,0	1/1:6,15:21:63.18:965,63,0	1/1:8,9:17:27.07:414,27,0	0/0:57,0:57:99:0,166,3076	1/1:5,4:9:27.09:447,27,0	1/1:7,8:15:24.08:391,24,0	1/1:5,7:12:14.71:226,15,0	0/0:17,0:17:51.17:0,51,951	0/0:30,0:30:87.29:0,87,1580	0/0:27,0:27:81.28:0,81,1510	1/1:7,18:25:60.20:977,60,0	1/1:6,15:21:43.79:1003,44,0	1/1:10,17:27:50.29:1203,50,0	1/1:2,3:5:11.71:144,12,0
chr10	58022149	.	A	AG	6125.48	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=6.192;DP=450;FS=5.538;HRun=6;HaplotypeScore=58.4138;InbreedingCoeff=0.9695;MQ=68.09;MQ0=0;MQRankSum=-1.675;QD=29.17;ReadPosRankSum=-2.461;VQSLOD=4.5746;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:78.15:0,78,787	1/1:2,6:7:15.05:185,15,0	0/0:16,0:12:18:0,18,168	0/0:12,0:10:17.39:0,17,152	0/0:21,0:21:54.12:0,54,550	0/0:24,0:24:63.11:0,63,633	0/0:10,0:10:24.05:0,24,245	1/1:6,17:22:48.13:586,48,0	1/1:1,10:11:30.10:377,30,0	1/1:1,14:15:42.13:528,42,0	1/1:1,11:12:30.10:377,30,0	0/0:22,0:22:60.14:0,60,612	0/0:11,0:11:33.07:0,33,336	0/0:17,0:17:48.11:0,48,489	1/1:2,13:15:30.10:377,30,0	1/1:4,11:15:27.05:326,27,0	1/1:6,20:26:63.20:789,63,0	0/0:38,0:38:99:0,108,1091	1/1:2,8:10:24.08:302,24,0	1/1:2,8:10:24.08:302,24,0	1/1:1,17:18:42.13:528,42,0	0/0:12,0:12:36.08:0,36,367	0/0:12,0:12:27.06:0,27,275	0/0:16,0:16:39.09:0,39,398	1/1:2,18:20:60.19:740,60,0	1/1:5,12:17:33.10:408,33,0	1/1:0,8:8:21.07:264,21,0	1/1:1,1:2:3.01:38,3,0
chr10	58024070	.	CAA	C	2855.38	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=5.578;DP=695;FS=4.342;HRun=3;HaplotypeScore=168.1819;InbreedingCoeff=0.9523;MQ=56.89;MQ0=0;MQRankSum=-6.225;QD=37.57;ReadPosRankSum=0.935;VQSLOD=2.9496;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,132,2386	1/1:0,9:9:27.09:412,27,0	0/0:14,0:13:26.15:0,26,667	0/0:19,0:18:54.17:0,54,968	0/0:28,0:28:84.08:0,84,1467	0/0:28,0:28:78.14:0,78,1392	0/0:31,0:31:93.26:0,93,1716	1/1:1,29:30:84.23:1283,84,0	0/0:17,0:17:51.06:0,51,843	0/0:29,0:29:71.98:0,72,1331	0/0:18,0:18:51.06:0,51,842	0/0:27,0:27:75.19:0,75,1373	0/0:24,0:24:72.11:0,72,1229	0/0:31,0:31:90.14:0,90,1577	0/0:28,0:28:84.10:0,84,1428	1/1:1,15:16:42.14:642,42,0	1/1:0,21:21:45.15:678,45,0	0/0:56,0:56:99:0,166,3113	0/0:18,0:18:48.59:0,49,830	0/0:24,0:24:63.22:0,63,1203	0/0:43,0:43:99:0,114,2119	0/0:26,0:26:75.22:0,75,1411	0/0:25,0:25:72.01:0,72,1132	0/0:24,0:24:66.22:0,66,1243	0/0:15,0:15:35.99:0,36,573	0/0:27,0:27:69.19:0,69,1295	0/0:18,0:18:48.16:0,48,910	0/0:1,0:1:3.01:0,3,58
chr10	58024555	.	CTAA	C	3596.75	PASS	AB=0.674;AC=5;AF=0.089;AN=56;BaseQRankSum=5.727;DP=604;FS=0.466;HRun=0;HaplotypeScore=97.1764;InbreedingCoeff=0.7779;MQ=70.92;MQ0=0;MQRankSum=-0.212;QD=38.67;ReadPosRankSum=3.173;VQSLOD=4.6932;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,28:28:72.25:1270,72,0	0/0:14,0:14:42.10:0,42,939	0/0:19,0:19:28.11:0,28,969	0/0:14,0:13:39.13:0,39,839	1/1:0,34:34:96.33:1678,96,0	0/0:28,0:28:84.29:0,84,1963	0/0:7,0:7:21.05:0,21,428	0/0:29,0:29:87.29:0,87,2012	0/0:22,0:22:66.23:0,66,1518	0/0:22,0:22:66.23:0,66,1537	0/0:21,0:21:63.22:0,63,1489	0/0:13,0:13:39.13:0,39,923	0/0:24,0:24:72.23:0,72,1654	0/0:11,0:11:33.11:0,33,769	0/0:17,0:17:51.18:0,51,1186	0/0:18,0:18:51.17:0,51,1174	0/0:35,0:35:99:0,99,2291	0/1:16,15:31:99:648,0,1045	0/0:23,0:23:69.19:0,69,1527	0/0:25,0:25:75.26:0,75,1731	0/0:26,0:26:75.25:0,75,1700	0/0:24,0:24:72.25:0,72,1677	0/0:24,0:24:72.19:0,72,1649	0/0:16,0:16:45.15:0,45,1056	0/0:21,0:21:63.22:0,63,1489	0/0:29,0:29:87.30:0,87,2038	0/0:21,0:21:63.22:0,63,1487	0/0:8,0:8:24.08:0,24,505
chr10	58024717	.	CATGG	C	16231.56	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=17.405;DP=625;FS=10.971;HRun=0;HaplotypeScore=151.1496;InbreedingCoeff=0.9987;MQ=77.61;MQ0=0;MQRankSum=-15.913;QD=50.57;ReadPosRankSum=2.127;VQSLOD=5.3218;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:90.31:0,90,2378	1/1:0,12:12:36.12:679,36,0	0/0:20,0:20:57.19:0,57,1354	0/0:17,0:17:42.08:0,42,1066	0/0:23,0:23:69.24:0,69,1845	0/0:26,0:26:78.25:0,78,2032	0/0:18,0:18:54.19:0,54,1479	1/1:2,23:25:69.23:1306,69,0	1/1:4,19:23:66.23:1263,66,0	1/1:4,21:25:69.21:1266,69,0	1/1:0,22:22:57.20:1085,57,0	0/0:20,0:20:60.18:0,60,1526	0/0:24,0:24:72.25:0,72,1940	0/0:18,0:18:48.16:0,48,1307	1/1:1,18:19:54.19:1046,54,0	1/1:3,14:17:45.14:834,45,0	1/1:4,23:27:69.23:1309,69,0	0/0:27,0:27:72.21:0,72,1855	1/1:4,17:21:51.17:988,51,0	1/1:1,32:32:87.30:1678,87,0	1/1:2,13:15:27.09:486,27,0	0/0:27,0:27:78.25:0,78,1973	0/0:26,0:26:75.24:0,75,1960	0/0:28,0:28:75.26:0,75,2047	1/1:3,20:23:66.23:1268,66,0	1/1:3,20:23:63.22:1215,63,0	1/1:6,23:29:78.27:1478,78,0	1/1:0,7:7:18.06:330,18,0
chr10	58024761	.	C	CTT	18064.96	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=10.954;DP=637;FS=5.376;HRun=0;HaplotypeScore=119.3115;InbreedingCoeff=0.9988;MQ=86.01;MQ0=0;MQRankSum=-12.892;QD=56.10;ReadPosRankSum=0.477;VQSLOD=4.5209;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,102,1648	1/1:0,10:10:30.10:587,30,0	0/0:24,0:24:72.24:0,72,1141	0/0:26,0:26:72.19:0,72,1101	0/0:21,0:21:63.17:0,63,995	0/0:32,0:32:93.32:0,93,1510	0/0:24,0:24:72.23:0,72,1143	1/1:3,33:38:99:2174,111,0	1/1:0,15:15:42.14:852,42,0	1/1:1,25:27:81.26:1607,81,0	1/1:1,20:22:63.22:1270,63,0	0/0:20,0:20:60.20:0,60,970	0/0:20,0:20:54.17:0,54,856	0/0:17,0:17:51.17:0,51,830	1/1:1,16:17:51.13:972,51,0	1/1:0,20:20:60.21:1217,60,0	1/1:0,27:27:69.24:1400,69,0	0/0:32,0:32:87.30:0,87,1414	1/1:1,16:17:48.16:974,48,0	1/1:0,31:31:93.24:1806,93,0	1/1:0,22:23:60.21:1218,60,0	0/0:22,0:22:66.23:0,66,1076	0/0:18,0:18:54.18:0,54,873	0/0:24,0:24:72.25:0,72,1168	1/1:0,19:19:57.15:1094,57,0	1/1:1,20:22:63.22:1251,63,0	1/1:0,24:28:63.22:1278,63,0	1/1:0,6:6:18.06:365,18,0
chr10	58025740	.	CTCAGTGTG	C	18960.41	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=16.616;DP=550;FS=2.359;HRun=0;HaplotypeScore=151.1823;InbreedingCoeff=0.9886;MQ=63.30;MQ0=0;MQRankSum=-16.030;QD=66.53;ReadPosRankSum=1.306;VQSLOD=5.0275;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:66.23:0,66,2877	1/1:0,11:11:30.10:848,30,0	0/0:15,0:15:42.14:0,42,1530	0/0:16,0:15:32.20:0,32,1563	0/0:31,0:31:87.30:0,87,3698	0/0:20,0:20:60.21:0,60,2647	0/0:8,0:8:21.07:0,21,832	1/1:9,24:33:72.22:1873,72,0	1/1:0,25:25:69.24:1952,69,0	1/1:0,29:29:87.30:2454,87,0	1/1:2,20:22:48.16:1357,48,0	0/0:11,0:11:33.11:0,33,1223	0/0:16,0:16:48.16:0,48,2127	0/0:15,0:15:42.14:0,42,1858	1/1:0,10:10:21.07:594,21,0	1/1:0,11:11:24.08:679,24,0	1/1:3,11:14:21.07:594,21,0	0/0:48,0:48:99:0,132,5501	1/1:0,15:15:45.15:1232,45,0	1/1:2,35:37:93.32:2630,93,0	1/1:1,10:11:9.03:255,9,0	0/0:24,0:24:66.23:0,66,2744	0/0:27,0:27:78.27:0,78,3391	0/0:9,0:9:27.09:0,27,1110	1/1:3,10:13:30.10:848,30,0	1/1:3,17:20:51.18:1438,51,0	1/1:4,23:27:60.21:1697,60,0	1/1:0,7:7:18.06:509,18,0
chr10	58025869	.	TA	T	609.11	PASS	AB=0.652;AC=1;AF=0.018;AN=56;BaseQRankSum=5.996;DP=580;FS=2.383;HRun=8;HaplotypeScore=57.2243;InbreedingCoeff=-0.0187;MQ=77.52;MQ0=0;MQRankSum=-1.655;QD=10.50;ReadPosRankSum=2.263;VQSLOD=1.9946;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:81.20:0,81,942	0/0:8,0:8:24.07:0,24,290	0/0:16,0:14:16.91:0,17,283	0/0:21,0:21:35.85:0,36,382	0/0:23,0:23:69.19:0,69,810	0/0:17,0:17:48.12:0,48,565	0/0:19,0:19:51.09:0,51,598	0/0:27,0:27:66.20:0,66,797	0/0:18,0:18:51.11:0,51,599	0/0:22,0:22:60.18:0,60,725	0/0:18,0:18:48.15:0,48,579	0/0:10,0:10:30.09:0,30,362	0/0:14,0:14:42.12:0,42,496	0/0:13,0:13:39.12:0,39,471	0/0:11,0:11:33.10:0,33,399	0/0:16,0:16:48.15:0,48,580	0/0:25,0:25:72.18:0,72,850	0/1:27,31:58:99:684,0,677	0/0:26,0:26:72.19:0,72,837	0/0:28,0:28:72.22:0,72,869	0/0:19,0:19:45.11:0,45,518	0/0:21,0:21:51.16:0,51,616	0/0:25,0:25:66.19:0,66,786	0/0:10,0:10:30.09:0,30,362	0/0:27,0:27:78.24:0,78,942	0/0:18,0:18:45.12:0,45,527	0/0:33,0:33:90.28:0,90,1085	0/0:9,0:9:27.08:0,27,326
chr10	58026819	.	TG	T	2888.66	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=12.918;DP=681;FS=1.426;HRun=2;HaplotypeScore=114.0048;InbreedingCoeff=0.9955;MQ=83.44;MQ0=0;MQRankSum=-2.075;QD=35.23;ReadPosRankSum=1.914;VQSLOD=3.4611;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,138,2021	1/1:0,12:12:36.12:467,36,0	0/0:22,0:22:44.15:0,44,557	0/0:18,0:18:33.10:0,33,353	0/0:29,0:29:78.26:0,78,1168	0/0:24,0:24:66.21:0,66,966	0/0:24,0:24:72.23:0,72,1059	1/1:0,21:21:63.18:790,63,0	0/0:29,0:29:87.22:0,87,1256	0/0:33,0:33:93.27:0,93,1350	0/0:19,0:19:48.11:0,48,640	0/0:20,0:20:60.20:0,60,891	0/0:29,0:29:84.28:0,84,1259	0/0:33,0:33:99:0,99,1463	0/0:26,0:26:75.25:0,75,1123	1/1:1,20:21:60.20:779,60,0	1/1:0,28:28:78.25:1013,78,0	0/0:40,0:40:99:0,120,1747	0/0:15,0:15:45.14:0,45,655	0/0:24,0:24:69.20:0,69,990	0/0:37,0:37:99:0,108,1573	0/0:16,0:16:48.14:0,48,679	0/0:19,0:19:45.15:0,45,672	0/0:21,0:21:63.20:0,63,925	0/0:20,0:20:60.18:0,60,857	0/0:23,0:23:66.21:0,66,953	0/0:25,0:25:72.24:0,72,1079	0/0:5,0:5:15.05:0,15,225
chr10	58028587	.	TCTTTCTTTCTTC	T	5244.75	PASS	AB=0.996;AC=24;AF=0.429;AN=56;BaseQRankSum=-5.653;DP=701;FS=31.156;HRun=0;HaplotypeScore=242.0197;InbreedingCoeff=-0.3408;MQ=65.09;MQ0=1;MQRankSum=-1.046;QD=9.45;ReadPosRankSum=2.626;VQSLOD=2.2187;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:30:99:185,0,1042	1/1:1,14:15:17.65:251,18,0	0/0:20,0:15:16.84:0,17,173	0/0:13,0:11:18.04:0,18,194	0/1:26,0:26:99:222,0,286	0/0:28,0:28:57.83:0,58,402	0/1:15,0:15:48.32:48,0,240	1/1:39,0:39:92.98:838,93,0	0/0:21,0:21:18.06:0,18,385	0/1:26,0:26:99:140,0,563	0/1:25,0:25:99:110,0,409	0/1:14,0:14:57.83:58,0,169	0/0:28,0:28:72.16:0,72,2585	0/0:19,0:19:51.09:0,51,1627	1/1:27,0:27:7.94:32,8,0	0/0:17,0:17:6.02:0,6,129	0/1:24,2:26:46.28:593,0,46	0/1:45,0:45:99:525,0,1076	0/1:16,0:16:98.12:98,0,481	0/1:38,0:38:99:321,0,1622	0/1:10,0:10:47.90:48,0,696	0/1:33,0:33:99:413,0,323	0/1:27,0:27:99:118,0,311	0/1:22,0:22:38.09:38,0,183	0/1:18,0:18:99:239,0,738	0/1:35,0:35:99:254,0,1673	0/1:31,0:31:99:374,0,1162	0/1:37,0:37:99:340,0,969
chr10	58028591	.	T	TCTTC	1222.64	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=-0.187;DP=690;FS=9.119;HRun=0;HaplotypeScore=161.5903;InbreedingCoeff=0.3727;MQ=63.14;MQ0=4;MQRankSum=2.178;QD=8.86;ReadPosRankSum=-0.571;VQSLOD=2.4719;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:29:5.41:327,0,5	0/0:15,0:15:11.45:0,11,83	0/0:19,0:14:20.66:0,21,374	0/0:10,0:8:20.85:0,21,380	1/1:1,28:30:75.74:571,76,0	0/0:30,0:30:69.22:0,69,1183	0/0:14,0:14:41.88:0,42,716	0/0:37,0:36:76.44:0,76,676	0/0:24,0:24:18.06:0,18,280	0/0:25,0:25:65.70:0,66,722	0/0:24,0:25:53.42:0,53,443	0/0:13,0:13:27.09:0,27,485	0/0:25,0:25:75.23:0,75,1321	0/0:19,0:19:57.19:0,57,1039	0/0:2,0:27:11.98:0,12,102	0/0:16,0:16:6.02:0,6,95	0/0:28,0:27:68.42:0,68,537	0/1:41,0:41:99:315,0,264	0/0:16,0:16:38.60:0,39,424	0/0:36,0:36:41.13:0,41,917	0/0:10,0:10:30.01:0,30,364	0/0:30,0:30:66.20:0,66,1088	0/0:28,0:28:48.11:0,48,900	0/0:22,0:22:14.96:0,15,545	0/0:19,0:19:57.06:0,57,647	0/0:33,0:33:87.16:0,87,1068	0/0:31,0:31:88.24:0,88,946	0/1:38,0:37:99:134,0,554
chr10	58028595	.	TCTTC	T	7091.26	PASS	AB=0.998;AC=30;AF=0.536;AN=56;BaseQRankSum=-1.210;DP=683;FS=27.803;HRun=0;HaplotypeScore=136.2548;InbreedingCoeff=0.0288;MQ=60.17;MQ0=4;MQRankSum=0.116;QD=12.40;ReadPosRankSum=-1.441;VQSLOD=2.1400;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:29:99:266,0,157	1/1:14,0:14:17.48:125,17,0	0/0:14,0:9:16.76:0,17,172	0/0:10,0:8:18.04:0,18,194	0/1:28,0:28:2.41:323,0,2	0/1:31,0:31:26.30:26,0,293	0/1:15,0:15:4.67:5,0,240	1/1:33,0:32:92.98:838,93,0	1/1:0,24:24:18.06:340,18,0	1/1:2,23:25:66.76:807,67,0	1/1:1,24:25:56.43:559,56,0	0/0:13,0:13:15.02:0,15,184	0/0:26,0:26:78.10:0,78,1306	0/0:19,0:19:51.06:0,51,797	1/1:25,0:25:9.03:105,9,0	1/1:0,17:17:5.95:113,6,0	1/1:28,0:27:37.90:566,38,0	0/1:41,0:41:99:578,0,107	0/1:14,0:14:89.39:153,0,89	0/1:36,0:36:99:452,0,305	0/1:10,0:10:74.95:75,0,165	0/1:31,0:31:5.01:5,0,341	0/0:29,0:29:29.78:0,30,350	0/1:26,0:26:43.71:44,0,211	0/1:20,0:20:99:311,0,150	0/1:30,1:31:99:451,0,285	0/1:33,0:33:99:493,0,244	0/1:36,0:35:99:459,0,136
chr10	58028599	.	CCTTTCTTTCTTT	C	2124.67	PASS	AB=1.000;AC=16;AF=0.308;AN=52;BaseQRankSum=1.224;DP=682;FS=0.000;HRun=0;HaplotypeScore=249.7741;InbreedingCoeff=0.6541;MQ=59.80;MQ0=6;MQRankSum=-4.102;QD=9.16;ReadPosRankSum=-3.560;VQSLOD=1.6819;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:3.46:0,3,1423	1/1:14,0:14:5.81:140,6,0	./.	./.	0/0:27,0:27:30.55:0,31,797	1/1:13,0:31:12.44:29,12,0	1/1:16,0:16:4.72:224,5,0	0/0:32,0:30:5.92:0,6,39	0/0:24,0:24:18.06:0,18,539	0/0:23,0:23:42.51:0,43,990	0/0:25,0:25:35.18:0,35,689	1/1:8,6:14:3.01:103,3,0	0/0:26,0:26:54.16:0,54,2403	0/0:21,0:20:36.12:0,36,1410	0/0:25,0:25:7.23:0,7,26	0/0:18,0:18:9.02:0,9,209	0/1:29,0:28:64.54:398,0,65	0/1:42,0:42:30.03:30,0,1543	0/0:12,0:12:18.05:0,18,741	0/0:34,0:35:51.15:0,51,2149	0/0:9,0:9:18.06:0,18,876	1/1:13,18:31:35.69:695,36,0	1/1:15,14:29:8.62:222,9,0	1/1:26,0:26:22.33:459,22,0	0/0:22,0:22:21.07:0,21,1027	0/0:32,0:32:54.18:0,54,2303	0/0:33,0:33:42.13:0,42,1614	0/0:28,0:32:36.11:0,36,1344
chr10	58028748	.	CTGT	C	3179.79	PASS	AB=0.707;AC=5;AF=0.089;AN=56;BaseQRankSum=-1.720;DP=687;FS=0.993;HRun=0;HaplotypeScore=139.1660;InbreedingCoeff=0.7786;MQ=76.08;MQ0=0;MQRankSum=-2.732;QD=35.33;ReadPosRankSum=2.740;VQSLOD=4.2787;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,29:31:78.27:1375,78,0	0/0:10,0:10:30.10:0,30,709	0/0:11,0:11:30.10:0,30,705	0/0:18,0:18:36.28:0,36,1139	1/1:0,30:30:87.25:1486,87,0	0/0:40,0:38:99:0,114,2596	0/0:19,0:19:57.18:0,57,1258	0/0:21,0:21:63.22:0,63,1490	0/0:27,0:27:78.25:0,78,1799	0/0:29,0:29:84.28:0,84,1929	0/0:26,0:26:78.27:0,78,1823	0/0:18,0:18:48.16:0,48,1115	0/0:31,0:31:90.31:0,90,2109	0/0:19,0:19:54.19:0,54,1277	0/0:30,0:30:90.29:0,90,2081	0/0:20,0:20:60.19:0,60,1369	0/0:19,0:19:57.20:0,57,1346	0/1:17,12:29:99:448,0,1094	0/0:14,0:14:42.14:0,42,979	0/0:36,0:36:99:0,108,2507	0/0:20,0:20:60.21:0,60,1416	0/0:31,0:31:87.30:0,87,2037	0/0:33,0:33:90.29:0,90,2076	0/0:26,0:26:75.21:0,75,1720	0/0:33,0:33:99:0,99,2297	0/0:25,0:25:75.26:0,75,1754	0/0:34,0:34:99:0,99,2294	0/0:7,0:7:21.07:0,21,497
chr10	58029419	.	TG	T	10583.89	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=12.103;DP=618;FS=2.517;HRun=3;HaplotypeScore=59.9511;InbreedingCoeff=0.9998;MQ=83.99;MQ0=0;MQRankSum=-3.646;QD=33.71;ReadPosRankSum=2.238;VQSLOD=5.5110;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,105,1491	1/1:1,15:16:45.14:558,45,0	0/0:16,0:16:45.15:0,45,626	0/0:21,0:21:53.86:0,54,627	0/0:21,0:21:63.21:0,63,893	0/0:17,0:17:51.17:0,51,734	0/0:19,0:19:57.17:0,57,784	1/1:5,23:28:69.22:856,69,0	1/1:0,24:24:72.23:892,72,0	1/1:2,25:27:75.22:917,75,0	1/1:1,15:16:45.14:558,45,0	0/0:21,0:21:63.19:0,63,872	0/0:22,0:22:63.21:0,63,907	0/0:22,0:22:66.20:0,66,930	1/1:0,24:24:60.19:744,60,0	1/1:1,25:26:60.19:744,60,0	1/1:0,23:23:63.20:781,63,0	0/0:50,0:50:99:0,147,2082	1/1:0,12:12:36.11:444,36,0	1/1:0,15:15:45.14:558,45,0	1/1:1,32:33:90.28:1116,90,0	0/0:20,0:20:54.18:0,54,776	0/0:23,0:23:66.20:0,66,920	0/0:16,0:16:48.16:0,48,688	1/1:0,17:17:45.14:558,45,0	1/1:0,15:15:45.14:557,45,0	1/1:0,29:29:78.25:967,78,0	1/1:0,9:9:27.08:335,27,0
chr10	58030039	.	A	AGGTGGGGC	12905.40	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-5.617;DP=672;FS=0.395;HRun=0;HaplotypeScore=162.7375;InbreedingCoeff=0.9891;MQ=92.89;MQ0=0;MQRankSum=-15.364;QD=81.17;ReadPosRankSum=-1.724;VQSLOD=4.5697;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,25:36:78.20:3130,78,0	1/1:4,2:10:9.03:397,9,0	0/0:33,0:33:89.82:0,90,2145	0/0:32,0:32:87.24:0,87,2147	1/1:0,16:22:39.02:1701,39,0	0/0:19,0:19:51.14:0,51,1322	0/0:34,0:34:90.24:0,90,2287	1/1:9,14:29:78.27:3150,78,0	0/0:23,0:23:63.20:0,63,1723	0/0:27,0:27:75.25:0,75,2036	0/0:24,0:24:69.20:0,69,1772	0/0:16,0:16:48.15:0,48,1293	0/0:20,0:20:60.19:0,60,1638	0/0:19,0:19:51.16:0,51,1347	0/0:23,0:23:69.24:0,69,1917	1/1:5,11:20:39.13:1591,39,0	1/1:3,11:18:27.09:1191,27,0	1/1:8,11:24:42.13:1747,42,0	0/0:24,0:24:66.12:0,66,1679	0/0:30,0:30:90.30:0,90,2474	0/0:34,0:34:90.31:0,90,2546	0/0:14,0:14:42.12:0,42,1069	0/0:23,0:23:60.21:0,60,1697	0/0:23,0:23:69.21:0,69,1778	0/0:26,0:26:75.19:0,75,1912	0/0:25,0:25:75.24:0,75,2001	0/0:30,0:29:84.25:0,84,2179	0/0:14,0:14:39.10:0,39,994
chr10	58030200	.	GAGT	G	1838.85	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.612;DP=574;FS=11.881;HRun=0;HaplotypeScore=86.4504;InbreedingCoeff=0.9993;MQ=78.95;MQ0=0;MQRankSum=-1.288;QD=34.05;ReadPosRankSum=-1.823;VQSLOD=2.9336;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:66.20:0,66,1422	1/1:1,14:15:36.12:613,36,0	0/0:26,0:25:59.77:0,60,1109	0/0:26,0:21:29.41:0,29,563	0/0:24,0:24:60.21:0,60,1380	0/0:18,0:18:54.17:0,54,1199	0/0:13,0:13:36.10:0,36,757	1/1:0,21:21:57.15:858,57,0	0/0:19,0:19:57.20:0,57,1301	0/0:24,0:24:69.24:0,69,1574	0/0:24,0:24:63.22:0,63,1445	0/0:17,0:17:51.16:0,51,1131	0/0:19,0:19:57.20:0,57,1265	0/0:16,0:16:48.15:0,48,1060	0/0:14,0:14:42.14:0,42,945	0/0:14,0:14:39.13:0,39,889	1/1:2,16:18:30.10:510,30,0	0/0:37,0:37:99:0,108,2318	0/0:20,0:19:60.18:0,60,1266	0/0:33,0:33:84.26:0,84,1846	0/0:10,0:10:30.10:0,30,691	0/0:16,0:16:48.16:0,48,1105	0/0:22,0:22:63.22:0,63,1434	0/0:16,0:16:48.12:0,48,1057	0/0:22,0:21:66.22:0,66,1484	0/0:22,0:22:66.23:0,66,1496	0/0:28,0:28:84.27:0,84,1867	0/0:16,0:16:48.16:0,48,987
chr10	58030529	.	A	AG	4569.90	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=18.349;DP=636;FS=19.814;HRun=1;HaplotypeScore=204.4940;InbreedingCoeff=0.9943;MQ=87.85;MQ0=0;MQRankSum=-18.258;QD=11.87;ReadPosRankSum=5.261;VQSLOD=1.6928;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:35,0:35:57.74:336,58,0	1/1:17,0:17:38.82:175,39,0	0/0:29,0:29:78.19:0,78,947	0/0:30,0:30:77.80:0,78,952	1/1:20,1:21:19.08:134,19,0	0/0:13,0:13:39.11:0,39,492	0/0:25,0:25:72.23:0,72,935	1/1:25,0:25:62.19:412,62,0	1/1:21,2:23:54.80:295,55,0	1/1:25,1:26:67.87:412,68,0	1/1:13,0:13:16.11:78,16,0	0/0:32,0:32:96.30:0,96,1233	0/0:34,0:34:99:0,102,1310	0/0:38,0:38:99:0,108,1388	1/1:24,2:26:53.34:307,53,0	1/1:22,1:23:56.47:312,56,0	1/1:18,0:18:17.26:94,17,0	1/1:31,2:33:72.88:439,73,0	1/1:10,0:10:22.54:129,23,0	1/1:17,0:17:32.40:158,32,0	1/1:27,0:27:36.62:307,37,0	0/0:14,0:14:42.14:0,42,545	0/0:17,0:17:48.13:0,48,595	0/0:19,0:19:57.16:0,57,723	1/1:15,0:15:38.15:164,38,0	1/1:25,3:28:75.89:526,76,0	1/1:19,0:19:41.08:207,41,0	1/1:9,0:9:19.21:85,19,0
chr10	58030530	.	GTCACA	G	14222.64	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=18.667;DP=619;FS=17.062;HRun=0;HaplotypeScore=204.3544;InbreedingCoeff=0.9981;MQ=87.63;MQ0=0;MQRankSum=-17.936;QD=38.44;ReadPosRankSum=3.329;VQSLOD=3.4035;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,28:36:70.52:1027,71,0	1/1:2,16:18:50.67:804,51,0	0/0:28,0:28:78.21:0,78,2360	0/0:29,0:29:69.23:0,69,2305	1/1:5,16:21:24.10:350,24,0	0/0:13,0:13:39.12:0,39,1187	0/0:25,0:25:75.26:0,75,2394	1/1:4,13:17:50.94:807,51,0	1/1:3,19:22:59.78:983,60,0	1/1:4,19:23:67.78:1177,68,0	1/1:3,9:12:20.97:332,21,0	0/0:32,0:32:96.33:0,96,3133	0/0:34,0:34:99:0,102,3360	0/0:38,0:38:99:0,111,3518	1/1:5,22:27:74.95:1145,75,0	1/1:4,19:23:68.98:1122,69,0	1/1:4,15:19:38.61:429,39,0	1/1:9,21:30:88.91:1251,89,0	1/1:1,7:8:20.86:340,21,0	1/1:0,17:17:41.67:657,42,0	1/1:11,20:31:46.92:548,47,0	0/0:14,0:14:42.14:0,42,1345	0/0:16,0:16:48.13:0,48,1447	0/0:20,0:20:60.18:0,60,1808	1/1:2,14:16:45.36:763,45,0	1/1:7,19:26:78.05:1333,78,0	1/1:0,15:15:44.89:762,45,0	1/1:0,9:9:23.87:391,24,0
chr10	58030536	.	GTA	G	7848.07	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=19.578;DP=608;FS=8.603;HRun=0;HaplotypeScore=193.4640;InbreedingCoeff=0.9965;MQ=87.47;MQ0=0;MQRankSum=-17.827;QD=21.74;ReadPosRankSum=3.778;VQSLOD=4.6272;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,28:39:85.31:687,85,0	1/1:0,16:18:53.66:490,54,0	0/0:25,0:25:72.24:0,72,1321	0/0:31,0:31:75.26:0,75,1391	1/1:0,15:20:17.92:146,18,0	0/0:13,0:13:36.12:0,36,695	0/0:24,0:24:72.25:0,72,1391	1/1:0,13:17:50.82:474,51,0	1/1:1,19:22:59.74:546,60,0	1/1:0,19:23:67.81:646,68,0	1/1:0,9:11:17.81:155,18,0	0/0:32,0:32:96.33:0,96,1845	0/0:35,0:35:99:0,102,1930	0/0:37,0:37:99:0,105,1963	1/1:0,22:25:70.72:589,71,0	1/1:1,19:22:65.52:618,66,0	1/1:0,15:21:46.59:317,47,0	1/1:1,21:27:79.57:663,80,0	1/1:0,7:8:20.88:198,21,0	1/1:0,17:18:44.66:391,45,0	1/1:0,20:29:34.21:233,34,0	0/0:14,0:14:36.12:0,36,686	0/0:15,0:15:45.14:0,45,831	0/0:21,0:21:63.22:0,63,1216	1/1:0,14:16:47.82:446,48,0	1/1:0,19:21:62.92:598,63,0	1/1:0,15:15:44.88:427,45,0	1/1:0,9:9:23.88:225,24,0
chr10	58030923	.	C	CT	9144.63	PASS	AB=1.000;AC=27;AF=0.482;AN=56;BaseQRankSum=-12.148;DP=602;FS=8.130;HRun=7;HaplotypeScore=55.2106;InbreedingCoeff=0.9165;MQ=70.23;MQ0=0;MQRankSum=-0.213;QD=27.80;ReadPosRankSum=0.655;VQSLOD=5.3676;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,99,948	0/0:18,0:18:45.07:0,45,433	0/0:9,0:7:3.99:0,4,15	0/1:17,0:17:8.56:9,0,212	0/0:21,0:21:54.08:0,54,520	0/0:20,0:20:60.10:0,60,579	0/0:9,0:9:27.04:0,27,261	0/0:31,0:31:84.12:0,84,806	1/1:0,19:19:48.15:580,48,0	1/1:1,28:29:84.23:990,84,0	1/1:2,23:25:66.12:764,66,0	0/0:15,0:15:36.06:0,36,347	0/0:17,0:17:45.07:0,45,434	0/0:20,0:20:60.10:0,60,579	1/1:1,26:27:69.21:834,69,0	1/1:2,13:15:30.98:365,31,0	0/0:24,0:24:60.09:0,60,579	1/1:6,24:30:66.17:782,66,0	1/1:2,17:19:51.12:583,51,0	1/1:4,25:28:72.22:869,72,0	1/1:4,25:29:63.19:761,63,0	0/0:15,0:15:39.06:0,39,376	0/0:22,0:22:60.10:0,60,579	0/0:16,0:16:36.05:0,36,348	1/1:3,29:31:75.23:905,75,0	1/1:2,19:21:57.17:688,57,0	1/1:4,25:29:63.19:761,63,0	1/1:0,8:8:21.06:254,21,0
chr10	58031309	.	G	GA	1176.67	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=2.015;DP=592;FS=9.254;HRun=1;HaplotypeScore=171.2494;InbreedingCoeff=0.9338;MQ=77.26;MQ0=1;MQRankSum=-3.058;QD=16.12;ReadPosRankSum=-1.512;VQSLOD=2.5026;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:85.78:0,86,1121	1/1:18,0:18:41.21:269,41,0	0/0:36,0:32:69.65:0,70,887	0/0:27,0:24:52.07:0,52,553	0/0:38,0:38:99:0,99,1329	0/0:23,0:23:66.12:0,66,836	0/0:6,0:6:15.04:0,15,193	1/1:19,0:19:49.97:384,50,0	0/0:15,0:15:41.99:0,42,382	0/0:22,0:22:56.96:0,57,458	0/0:17,0:17:47.47:0,47,415	0/0:20,0:20:60.20:0,60,837	0/0:16,0:16:48.15:0,48,651	0/0:17,0:17:48.15:0,48,645	0/0:19,0:19:48.33:0,48,405	0/0:22,0:21:54.91:0,55,502	1/1:18,0:18:35.06:242,35,0	1/1:9,9:17:5.47:434,5,0	0/0:22,0:22:43.83:0,44,389	0/0:22,0:22:30.81:0,31,256	0/0:20,0:20:35.30:0,35,316	0/0:24,0:24:72.23:0,72,991	0/0:28,0:28:74.85:0,75,999	0/0:22,0:22:57.19:0,57,792	0/0:21,0:21:31.44:0,31,273	0/0:19,0:19:47.97:0,48,419	0/0:28,0:28:69.07:0,69,587	0/0:3,0:3:5.99:0,6,52
chr10	58031311	.	GGGA	G	2679.07	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=13.364;DP=599;FS=14.339;HRun=0;HaplotypeScore=190.6202;InbreedingCoeff=0.9692;MQ=76.48;MQ0=1;MQRankSum=-5.342;QD=9.11;ReadPosRankSum=-0.796;VQSLOD=2.1920;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:77.28:0,77,1565	1/1:18,0:18:34.55:194,35,0	0/0:38,0:32:9.51:0,10,1163	0/0:29,0:24:52.33:0,52,791	0/0:35,0:35:90.29:0,90,1883	0/0:23,0:23:57.17:0,57,1181	0/0:5,0:5:12.04:0,12,261	1/1:14,4:18:32.88:337,33,0	1/1:16,0:16:35.02:148,35,0	1/1:22,0:22:53.28:231,53,0	1/1:19,0:19:36.46:183,36,0	0/0:20,0:20:60.20:0,60,1260	0/0:16,0:16:45.15:0,45,946	0/0:18,0:18:54.19:0,54,1114	1/1:19,0:19:36.13:182,36,0	1/1:22,0:21:51.29:217,51,0	1/1:17,2:19:40.37:275,40,0	0/0:18,0:17:13.74:0,14,155	1/1:22,0:22:42.16:194,42,0	1/1:25,0:25:34:161,34,0	1/1:20,0:20:30.31:148,30,0	0/0:23,0:23:69.24:0,69,1494	0/0:27,0:27:75.67:0,76,1430	0/0:22,0:22:57.03:0,57,1187	1/1:21,0:21:30.32:166,30,0	1/1:21,0:21:44.89:198,45,0	1/1:28,0:28:61.21:253,61,0	1/1:4,0:4:5.36:21,5,0
chr10	58031312	.	GGA	G	8048.07	PASS	AB=1.000;AC=31;AF=0.554;AN=56;BaseQRankSum=12.250;DP=597;FS=19.403;HRun=0;HaplotypeScore=162.7779;InbreedingCoeff=0.9293;MQ=76.48;MQ0=1;MQRankSum=-2.880;QD=26.13;ReadPosRankSum=-0.863;VQSLOD=4.3745;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:32:77.82:0,78,1268	1/1:18,0:18:38.71:285,39,0	0/0:37,1:31:8.33:0,8,879	0/0:31,0:25:21.92:0,22,606	0/0:35,0:35:90.27:0,90,1519	0/0:23,0:23:60.17:0,60,976	0/0:5,0:5:12.04:0,12,212	1/1:16,0:16:42.46:294,42,0	1/1:3,13:16:44.87:571,45,0	1/1:2,21:23:66.16:906,66,0	1/1:6,12:18:41.97:518,42,0	0/0:20,0:20:60.19:0,60,1026	0/0:15,0:15:45.09:0,45,751	0/0:18,0:18:54.17:0,54,879	1/1:3,14:17:38.83:461,39,0	1/1:0,22:21:57.06:807,57,0	1/1:19,0:19:41.68:306,42,0	0/1:18,0:17:1.41:62,0,1	1/1:4,18:22:56.99:704,57,0	1/1:3,22:25:36.93:440,37,0	1/1:6,14:20:39.06:503,39,0	0/0:23,0:23:69.24:0,69,1208	0/0:27,0:27:75.20:0,75,1177	0/0:22,0:22:56.99:0,57,939	1/1:4,17:21:32.96:378,33,0	1/1:5,16:21:54.12:741,54,0	1/1:1,27:28:69.06:982,69,0	1/1:0,4:4:6.02:91,6,0
chr10	58031313	.	GA	G	5229.04	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=13.850;DP=592;FS=15.852;HRun=1;HaplotypeScore=165.3170;InbreedingCoeff=0.9807;MQ=77.19;MQ0=1;MQRankSum=-6.954;QD=17.43;ReadPosRankSum=-0.801;VQSLOD=3.4453;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:76.47:0,76,1008	1/1:0,17:17:38.98:475,39,0	0/0:38,0:31:31.20:0,31,765	0/0:32,0:26:52.60:0,53,554	0/0:35,0:35:90.26:0,90,1207	0/0:23,0:23:60.08:0,60,778	0/0:5,0:5:12.04:0,12,168	1/1:11,5:16:47.72:435,48,0	1/1:15,0:15:44.32:290,44,0	1/1:22,0:22:65.07:442,65,0	1/1:17,1:18:41.48:284,41,0	0/0:20,0:20:60.19:0,60,813	0/0:15,0:15:45.08:0,45,602	0/0:19,0:19:57.13:0,57,720	1/1:16,0:16:38.48:257,38,0	1/1:22,0:21:56.16:366,56,0	1/1:8,11:19:41.99:474,42,0	1/1:18,0:17:36.51:279,37,0	1/1:19,2:21:56.04:366,56,0	1/1:25,0:25:36.74:237,37,0	1/1:20,0:20:38.57:273,39,0	0/0:23,0:23:69.23:0,69,952	0/0:27,0:27:75.14:0,75,944	0/0:24,0:24:56.98:0,57,753	1/1:20,0:20:32.71:224,33,0	1/1:19,0:19:52.94:350,53,0	1/1:28,0:28:67.90:438,68,0	1/1:4,0:4:5.91:39,6,0
chr10	58031332	.	CTCTA	C	698.41	PASS	AC=12;AF=0.261;AN=46;BaseQRankSum=-0.907;DP=536;FS=8.299;HRun=0;HaplotypeScore=180.7605;InbreedingCoeff=0.6795;MQ=60.31;MQ0=17;MQRankSum=3.458;QD=6.85;ReadPosRankSum=0.130;VQSLOD=1.8213;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:26:5.99:0,6,49	./.	./.	./.	0/0:32,0:31:20.98:0,21,177	1/1:8,12:20:27.09:413,27,0	1/1:3,4:6:3.01:46,3,0	0/0:32,0:28:17.18:0,17,110	0/0:14,0:14:2.98:0,3,21	0/0:24,0:21:19.80:0,20,232	./.	0/0:16,0:16:15.05:0,15,346	0/0:16,0:16:24.05:0,24,458	0/0:23,0:23:45.14:0,45,951	0/0:16,0:16:3.88:0,4,26	0/0:19,0:18:6.02:0,6,91	1/1:15,0:14:6.02:92,6,0	0/0:20,0:16:6.91:0,7,115	0/0:16,0:16:9.03:0,9,132	0/0:24,0:23:5.98:0,6,64	0/0:16,0:15:6.02:0,6,88	1/1:13,4:17:12.04:183,12,0	1/1:21,0:22:6.32:35,6,0	1/1:18,1:18:8.85:80,9,0	0/0:19,0:18:3:0,3,45	0/0:19,0:19:21.04:0,21,287	0/0:25,0:25:23.99:0,24,306	./.
chr10	58031374	.	CT	C	432.24	PASS	AB=0.699;AC=2;AF=0.038;AN=52;BaseQRankSum=-1.972;DP=585;FS=0.000;HRun=1;HaplotypeScore=140.2452;InbreedingCoeff=-0.0043;MQ=34.83;MQ0=173;MQRankSum=3.801;QD=6.17;ReadPosRankSum=-0.623;VQSLOD=0.1268;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:23,11:24:67.96:142,0,68	0/0:7,0:7:6.02:0,6,92	./.	./.	0/1:16,20:28:99:377,0,133	0/0:30,0:27:25.98:0,26,213	0/0:15,0:10:1.39:0,1,4	0/0:39,0:31:91.62:0,92,1239	0/0:20,0:10:9.39:0,9,103	0/0:28,0:17:48.13:0,48,699	0/0:11,0:7:3.01:0,3,46	0/0:22,0:17:24.08:0,24,373	0/0:17,0:15:39.13:0,39,606	0/0:31,0:24:57.19:0,57,899	0/0:18,0:14:6.68:0,7,96	0/0:9,0:6:12.04:0,12,188	0/0:17,1:12:11.81:0,12,128	0/0:20,0:11:21.01:0,21,244	0/0:15,0:6:17.58:0,18,214	0/0:37,0:16:14.41:0,14,193	0/0:20,0:13:18.03:0,18,254	0/0:26,0:19:12.71:0,13,146	0/0:32,0:25:24.32:0,24,264	0/0:24,1:18:10.86:0,11,99	0/0:16,0:12:3.01:0,3,48	0/0:23,0:10:24.08:0,24,381	0/0:29,0:21:45.80:0,46,539	0/0:7,0:1:3.01:0,3,46
chr10	58031385	.	TC	T	648.63	PASS	AB=0.815;AC=8;AF=0.160;AN=50;BaseQRankSum=6.726;DP=563;FS=0.000;HRun=1;HaplotypeScore=132.3679;InbreedingCoeff=0.0802;MQ=32.08;MQ0=183;MQRankSum=-6.471;QD=4.44;ReadPosRankSum=-1.252;VQSLOD=-0.2712;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:28:24.30:0,24,332	0/0:5,0:5:0:0,0,0	./.	./.	0/0:32,0:24:27.03:0,27,373	0/0:31,0:28:38.28:0,38,323	0/0:18,0:11:2.49:0,2,10	0/0:25,0:16:41.94:0,42,405	0/0:15,4:9:0:0,0,1	0/1:22,6:15:29.46:219,0,29	0/1:9,3:7:0:0,0,0	0/0:21,0:16:24.07:0,24,358	0/0:14,0:12:30.10:0,30,472	0/0:29,0:22:51.16:0,51,783	1/1:14,5:14:0.03:1,0,0	0/0:6,0:3:3:0,3,25	0/0:16,0:10:4.43:0,4,16	0/1:19,2:12:32.12:32,0,126	0/1:9,3:6:22.59:102,0,23	0/0:29,10:18:2.48:0,2,9	0/0:13,2:7:2.60:0,3,10	0/0:26,0:19:15.06:0,15,126	0/0:30,0:22:14.91:0,15,206	0/0:25,0:18:10.32:0,10,148	0/0:14,6:15:0:0,0,0	0/1:20,4:10:48.22:135,0,48	0/1:17,13:22:36.65:267,0,37	./.
chr10	58031386	.	C	CT	1200.12	PASS	AB=0.818;AC=27;AF=0.540;AN=50;BaseQRankSum=6.916;DP=550;FS=2.247;HRun=1;HaplotypeScore=127.4768;InbreedingCoeff=0.4989;MQ=31.65;MQ0=183;MQRankSum=-6.625;QD=3.81;ReadPosRankSum=-2.347;VQSLOD=-0.5252;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,2:27:12.82:0,13,254	0/1:1,4:5:0:0,0,0	./.	./.	0/0:31,0:23:21.07:0,21,291	0/0:32,0:29:41.55:0,42,425	1/1:18,0:11:1.36:4,1,0	0/0:17,0:8:22.58:0,23,218	1/1:16,3:9:2.26:24,2,0	1/1:19,8:14:27.70:392,28,0	0/1:9,4:8:0:0,0,0	0/0:21,0:16:24.07:0,24,319	0/0:14,0:12:30:0,30,419	0/0:28,0:21:48.16:0,48,669	1/1:12,7:14:2.36:45,2,0	1/1:8,0:5:2.80:13,3,0	1/1:11,5:10:6.73:56,7,0	0/1:15,5:12:99:128,0,104	1/1:9,2:5:13.43:127,13,0	1/1:31,7:17:3.01:48,3,0	1/1:11,4:7:3.01:48,3,0	0/0:27,0:20:6.75:0,7,140	0/1:29,0:21:7.38:7,0,153	0/1:23,1:17:7.40:7,0,132	0/0:12,8:15:0:0,0,0	1/1:18,5:9:17.71:244,18,0	1/1:24,5:21:29.73:218,30,0	./.
chr10	58031390	.	TATCTATC	T	914.25	PASS	AB=0.952;AC=19;AF=0.432;AN=44;BaseQRankSum=7.933;DP=559;FS=2.756;HRun=0;HaplotypeScore=150.5668;InbreedingCoeff=0.3864;MQ=31.34;MQ0=183;MQRankSum=-8.578;QD=2.92;ReadPosRankSum=-3.165;VQSLOD=2.0801;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:30,8:27:52.63:53,0,53	0/0:5,0:5:0.45:0,0,1	./.	./.	0/1:25,6:23:23.07:23,0,30	0/0:32,0:29:45.04:0,45,1148	0/1:19,0:12:0:0,0,0	./.	0/1:21,0:11:0:0,0,1	1/1:30,0:17:18.83:93,19,0	0/1:15,0:10:0:0,0,0	0/0:20,0:15:21.06:0,21,548	0/0:14,0:12:27.09:0,27,862	0/0:29,0:22:51.17:0,51,1378	0/0:19,0:14:0.85:0,1,2	./.	0/1:17,0:11:22.82:80,0,23	0/1:21,0:12:99:115,0,182	1/1:11,0:5:10.80:154,11,0	1/1:38,0:17:0.88:2,1,0	1/1:17,0:9:0.89:2,1,0	0/0:27,0:20:15.04:0,15,260	0/0:29,0:21:12.04:0,12,287	0/0:22,0:15:10.95:0,11,282	./.	1/1:25,0:11:16.74:52,17,0	1/1:30,0:22:35.80:479,36,0	./.
chr10	58031394	.	TATC	T	1544.13	PASS	AB=1.000;AC=19;AF=0.432;AN=44;BaseQRankSum=7.892;DP=567;FS=0.708;HRun=0;HaplotypeScore=132.6582;InbreedingCoeff=0.5091;MQ=31.59;MQ0=181;MQRankSum=-8.316;QD=5.31;ReadPosRankSum=-2.640;VQSLOD=1.8522;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:39,0:28:3.06:3,0,307	0/0:5,0:5:1.25:0,1,3	./.	./.	0/0:31,0:23:15.05:0,15,289	0/0:32,0:29:45.03:0,45,933	0/1:21,0:14:0.02:0,0,0	./.	0/1:21,0:11:0:0,0,0	1/1:26,1:14:31.51:383,32,0	1/1:17,0:12:3.01:44,3,0	0/0:20,0:15:21.07:0,21,460	0/0:14,0:12:30.10:0,30,628	0/0:31,0:24:57.19:0,57,1108	0/0:12,5:12:0.35:0,0,1	./.	0/1:19,0:13:27.60:101,0,28	0/1:20,0:12:99:163,0,132	1/1:8,3:6:13.81:193,14,0	1/1:31,10:20:0.84:2,1,0	1/1:15,2:9:0.89:2,1,0	0/0:26,0:19:15.04:0,15,269	0/0:29,0:21:12.04:0,12,256	0/0:24,0:17:12.23:0,12,271	./.	1/1:27,0:13:28.42:327,28,0	1/1:18,13:23:38.68:470,39,0	./.
chr10	58031401	.	TATCTATC	T	1569.42	PASS	AB=0.949;AC=31;AF=0.596;AN=52;BaseQRankSum=5.111;DP=578;FS=2.216;HRun=0;HaplotypeScore=131.1617;InbreedingCoeff=0.4123;MQ=34.63;MQ0=179;MQRankSum=-3.757;QD=3.96;ReadPosRankSum=1.933;VQSLOD=2.6160;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:30:22.92:0,23,186	0/0:6,0:6:0.42:0,0,1	./.	./.	0/0:32,0:24:16.88:0,17,127	0/0:30,0:27:32.99:0,33,740	0/1:17,9:19:0:0,0,0	0/0:19,0:13:21.24:0,21,64	1/1:21,0:11:0.74:1,1,0	1/1:24,0:10:14.88:83,15,0	1/1:16,0:11:2.06:42,2,0	0/1:22,0:17:99:136,0,144	0/0:14,0:12:27.09:0,27,677	0/0:31,0:24:51.16:0,51,950	1/1:16,0:11:3.57:42,4,0	1/1:9,0:6:1.82:5,2,0	0/1:18,0:12:11.18:80,0,11	0/1:20,0:12:85.40:96,0,85	1/1:9,0:4:12.04:193,12,0	1/1:37,0:17:0.47:1,0,0	1/1:15,0:8:3.94:26,4,0	1/1:25,0:18:8.66:96,9,0	1/1:33,0:25:17.63:193,18,0	0/1:26,0:19:22.94:23,0,36	1/1:21,0:16:2.06:41,2,0	1/1:25,0:11:18.49:66,18,0	1/1:33,0:25:46.03:606,46,0	0/0:9,0:2:0.94:0,1,3
chr10	58031405	.	TATC	T	2759.79	PASS	AB=0.984;AC=33;AF=0.635;AN=52;BaseQRankSum=5.094;DP=576;FS=4.522;HRun=0;HaplotypeScore=107.7161;InbreedingCoeff=0.6524;MQ=35.36;MQ0=178;MQRankSum=-1.839;QD=7.36;ReadPosRankSum=-0.134;VQSLOD=2.8488;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:41,0:30:1.95:89,0,2	1/1:3,3:6:1.21:43,1,0	./.	./.	1/1:31,0:23:17.86:127,18,0	0/0:30,0:27:39.05:0,39,728	0/1:22,0:16:0:0,0,0	0/0:23,0:17:34.93:0,35,332	1/1:18,4:12:7.24:72,7,0	1/1:18,6:10:30.07:397,30,0	1/1:15,2:12:9.02:135,9,0	0/0:22,0:17:22.13:0,22,270	0/0:14,0:12:30.10:0,30,576	0/0:29,0:22:51.16:0,51,925	1/1:10,6:11:6.14:66,6,0	1/1:4,5:6:3.01:49,3,0	1/1:15,3:12:7.95:139,8,0	0/1:19,1:12:99:148,0,105	1/1:6,3:4:12.04:188,12,0	1/1:27,10:17:0.47:1,0,0	1/1:14,2:9:10.25:99,10,0	0/0:27,0:20:8.06:0,8,97	0/0:32,0:24:11.48:0,11,144	0/0:24,0:17:9.22:0,9,136	1/1:19,0:14:15.05:227,15,0	1/1:22,4:12:30.40:395,30,0	1/1:20,13:25:55.75:672,56,0	1/1:9,0:2:6.02:92,6,0
chr10	58031408	.	C	CTCT	1508.28	PASS	AB=0.805;AC=37;AF=0.712;AN=52;BaseQRankSum=7.710;DP=586;FS=6.798;HRun=0;HaplotypeScore=112.1344;InbreedingCoeff=0.3094;MQ=36.42;MQ0=178;MQRankSum=1.149;QD=3.03;ReadPosRankSum=1.380;VQSLOD=1.5808;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:27:7.69:8,0,43	0/1:3,0:6:0.21:1,0,0	./.	./.	1/1:21,0:21:9.33:26,9,0	0/0:30,0:27:41.87:0,42,731	0/1:22,0:16:0.11:0,0,0	0/1:24,0:18:95.48:95,0,490	1/1:15,0:12:7.01:19,7,0	1/1:20,0:10:15.38:69,15,0	1/1:7,0:13:7.23:59,7,0	0/1:14,0:17:64.81:65,0,165	0/0:14,0:12:29.89:0,30,533	0/0:29,0:22:51.16:0,51,858	1/1:13,0:12:8.44:48,8,0	1/1:8,0:6:2.94:18,3,0	0/0:8,0:10:1.39:0,1,16	0/1:14,0:12:88.22:122,0,88	1/1:8,0:4:11.98:114,12,0	1/1:33,0:18:4.81:30,5,0	1/1:10,0:9:9.49:46,9,0	1/1:17,1:21:8.45:66,8,0	1/1:18,0:25:17.90:133,18,0	0/1:12,3:23:35.89:36,0,38	1/1:5,0:14:11.75:80,12,0	1/1:18,0:12:16.85:85,17,0	1/1:23,0:27:57.62:539,58,0	1/1:7,0:4:2.80:7,3,0
chr10	58031411	.	CT	C	391.77	PASS	AB=1.000;AC=6;AF=0.111;AN=54;BaseQRankSum=1.334;DP=606;FS=2.348;HRun=1;HaplotypeScore=107.1146;InbreedingCoeff=0.6230;MQ=38.32;MQ0=183;MQRankSum=2.852;QD=3.66;ReadPosRankSum=2.243;VQSLOD=0.4842;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:30,8:27:20.92:259,21,0	0/0:6,0:6:4.72:0,5,29	./.	0/0:3,0:1:0.89:0,1,2	1/1:21,8:21:18.06:248,18,0	0/0:31,0:28:45.15:0,45,706	0/1:22,0:16:0:0,0,0	0/0:24,0:19:55.63:0,56,679	0/0:24,0:14:18.02:0,18,232	0/0:25,0:11:32.81:0,33,307	0/1:18,0:13:2.78:3,0,39	0/0:22,0:17:24.06:0,24,297	0/0:14,0:12:30.10:0,30,470	0/0:27,0:20:45.15:0,45,698	0/0:19,0:14:21.73:0,22,311	0/0:10,0:7:5.99:0,6,70	0/0:16,0:10:9.52:0,10,50	0/0:20,0:12:23.52:0,24,263	0/0:11,0:5:14.74:0,15,125	0/0:41,0:20:12.02:0,12,164	0/0:17,0:10:15.03:0,15,200	0/0:28,0:21:8.97:0,9,89	0/0:34,0:26:21.04:0,21,221	0/0:30,0:23:13.74:0,14,194	0/0:19,0:14:14.97:0,15,121	0/0:27,0:13:38.83:0,39,372	0/0:37,0:29:74.20:0,74,765	0/0:11,0:4:5.97:0,6,44
chr10	58043547	.	T	TG	1746.52	PASS	AC=32;AF=1.000;AN=32;DP=97;FS=0.000;HRun=0;HaplotypeScore=12.2307;InbreedingCoeff=-0.1091;MQ=21.13;MQ0=43;QD=21.56;VQSLOD=4.6319;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,4:4:9.03:143,9,0	1/1:1,0:1:3:25,3,0	./.	./.	1/1:4,3:4:3.01:48,3,0	1/1:4,2:2:6.02:95,6,0	1/1:6,3:3:9.03:143,9,0	1/1:4,7:10:27.09:414,27,0	1/1:4,2:2:6.02:95,6,0	./.	./.	./.	1/1:1,1:1:3.01:48,3,0	./.	1/1:0,4:4:8.92:143,9,0	1/1:0,3:3:6.02:94,6,0	1/1:6,3:3:9.03:143,9,0	./.	1/1:1,2:2:6.02:96,6,0	1/1:0,2:2:6.02:95,6,0	./.	./.	1/1:1,3:3:6.02:95,6,0	./.	1/1:0,1:1:3.01:48,3,0	./.	1/1:1,3:3:6.02:95,6,0	./.
chr10	58043617	.	AT	A	5458.04	PASS	AC=50;AF=1.000;AN=50;DP=159;FS=0.000;HRun=1;HaplotypeScore=53.6556;InbreedingCoeff=-0.0490;MQ=36.60;MQ0=1;QD=34.54;VQSLOD=4.4835;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,6:7:17.83:157,18,0	1/1:1,3:4:11.99:143,12,0	./.	./.	1/1:1,12:12:33.04:430,33,0	1/1:0,6:5:15.05:206,15,0	1/1:4,8:11:29.93:345,30,0	1/1:3,11:14:41.88:506,42,0	1/1:0,1:1:3.01:41,3,0	1/1:0,7:7:18.06:243,18,0	1/1:0,10:10:24.08:329,24,0	1/1:0,4:4:9.03:125,9,0	1/1:0,1:1:3.01:42,3,0	1/1:0,4:4:12.04:166,12,0	1/1:0,6:6:15.02:207,15,0	1/1:0,6:6:15.05:206,15,0	1/1:2,4:6:17.89:180,18,0	1/1:3,4:7:20.84:218,21,0	1/1:0,19:19:57.19:781,57,0	1/1:0,1:1:3.01:42,3,0	./.	1/1:0,1:1:3.01:41,3,0	1/1:0,3:3:6.02:82,6,0	1/1:0,2:2:3.01:41,3,0	1/1:0,4:4:12.04:165,12,0	1/1:0,6:6:18.06:247,18,0	1/1:1,7:8:21.02:268,21,0	1/1:0,6:6:18.06:248,18,0
chr10	58043618	.	TAA	T	3677.68	PASS	AC=52;AF=1.000;AN=52;BaseQRankSum=1.993;DP=160;FS=12.399;HRun=7;HaplotypeScore=61.5604;InbreedingCoeff=-0.0427;MQ=36.80;MQ0=1;MQRankSum=-1.078;QD=23.13;ReadPosRankSum=0.345;VQSLOD=1.0357;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,1:7:18.01:187,18,0	1/1:3,1:4:12.01:120,12,0	1/1:1,0:1:2.99:23,3,0	./.	1/1:12,1:12:32.89:272,33,0	1/1:6,0:5:14.94:114,15,0	1/1:12,0:11:24.76:221,25,0	1/1:12,2:14:38.50:368,38,0	1/1:1,0:1:2.99:24,3,0	1/1:7,0:7:17.95:141,18,0	1/1:10,0:10:23.92:193,24,0	1/1:4,0:4:9.01:86,9,0	1/1:1,0:1:3.01:30,3,0	1/1:4,0:4:12:110,12,0	1/1:6,0:6:14.97:127,15,0	1/1:6,0:6:14.97:124,15,0	1/1:6,0:6:13.56:146,14,0	1/1:7,0:7:17.02:188,17,0	1/1:19,0:19:56.98:504,57,0	1/1:1,0:1:3.01:30,3,0	./.	1/1:1,0:1:2.98:22,3,0	1/1:3,0:3:5.98:48,6,0	1/1:2,0:2:2.98:21,3,0	1/1:4,0:4:11.95:92,12,0	1/1:6,0:6:17.99:160,18,0	1/1:7,1:8:20.97:185,21,0	1/1:6,0:6:17.95:142,18,0
chr10	58043647	.	AT	A	4470.97	PASS	AB=1.000;AC=51;AF=0.911;AN=56;BaseQRankSum=-0.803;DP=226;FS=6.294;HRun=2;HaplotypeScore=68.2888;InbreedingCoeff=0.3921;MQ=48.20;MQ0=0;MQRankSum=-0.012;QD=20.14;ReadPosRankSum=0.577;VQSLOD=4.5987;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:6,6:12:20.22:271,20,0	1/1:2,2:4:9.02:99,9,0	0/1:2,0:2:24.28:24,0,26	0/0:2,0:1:2.90:0,3,16	1/1:4,9:13:38.87:396,39,0	1/1:0,9:9:27.02:318,27,0	1/1:1,13:14:35.94:391,36,0	1/1:4,17:21:57.09:673,57,0	1/1:3,0:3:6.01:18,6,0	1/1:11,0:11:19.87:97,20,0	1/1:12,1:13:19.04:105,19,0	1/1:4,2:6:15.01:150,15,0	0/0:2,0:2:4.15:0,4,14	1/1:6,0:6:10.23:83,10,0	1/1:7,0:7:14.81:79,15,0	1/1:1,9:10:27.07:325,27,0	1/1:2,7:9:23.97:264,24,0	1/1:2,7:9:27.06:314,27,0	1/1:19,0:18:26.83:173,27,0	1/1:2,0:2:3:25,3,0	1/1:2,0:2:4.30:16,4,0	1/1:0,4:4:8.96:95,9,0	1/1:1,3:4:11.95:127,12,0	1/1:1,2:3:8.94:90,9,0	1/1:5,0:5:3.45:12,3,0	1/1:10,0:10:18.65:114,19,0	1/1:18,0:18:36.04:177,36,0	1/1:6,0:6:11.78:34,12,0
chr10	58043648	.	T	TA	1113.63	PASS	AB=0.760;AC=19;AF=0.339;AN=56;BaseQRankSum=-2.600;DP=225;FS=17.517;HRun=1;HaplotypeScore=78.3873;InbreedingCoeff=0.6386;MQ=48.30;MQ0=0;MQRankSum=1.171;QD=11.85;ReadPosRankSum=2.103;VQSLOD=0.7758;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:11:18.36:0,18,63	0/0:3,0:3:4.88:0,5,13	0/0:2,0:2:3.01:0,3,33	0/0:2,0:1:2.22:0,2,7	0/0:13,0:13:20.79:0,21,55	0/0:9,0:9:14.64:0,15,42	0/0:14,0:14:18.75:0,19,51	0/0:20,0:21:28.13:0,28,75	1/1:0,3:3:9.01:83,9,0	1/1:6,5:11:5.77:128,6,0	1/1:7,6:13:11.81:147,12,0	0/0:6,0:6:3.83:0,4,11	0/0:2,0:2:5.88:0,6,37	0/0:6,0:6:6.11:0,6,28	1/1:4,3:7:3.34:70,3,0	0/0:10,0:10:14.64:0,15,42	0/0:9,0:9:13.47:0,13,35	0/0:10,0:10:13.80:0,14,38	0/1:13,6:18:7.94:142,0,8	0/0:2,0:2:0.89:0,1,2	1/1:0,2:2:6:53,6,0	0/0:4,0:4:4:0,4,11	0/0:3,0:4:7.14:0,7,20	0/0:3,0:3:4.96:0,5,13	1/1:2,3:5:6.81:77,7,0	1/1:7,3:10:9.30:92,9,0	1/1:5,13:18:38.60:343,39,0	1/1:0,6:6:18:159,18,0
chr10	58043793	.	C	CT	2426.50	PASS	AB=0.820;AC=33;AF=0.786;AN=42;BaseQRankSum=-2.479;DP=306;FS=3.736;HRun=15;HaplotypeScore=65.0069;InbreedingCoeff=0.2314;MQ=72.02;MQ0=11;MQRankSum=-0.361;QD=8.86;ReadPosRankSum=-0.132;VQSLOD=2.8975;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,18:32:55.33:397,55,0	./.	0/0:14,0:12:13.55:0,14,66	0/0:13,0:13:5.18:0,5,26	./.	0/1:3,4:7:3.01:86,0,3	1/1:8,8:15:23.93:195,24,0	1/1:28,1:37:48.75:284,49,0	1/1:5,7:12:14.94:120,15,0	1/1:1,3:3:8.99:74,9,0	./.	0/1:6,0:6:6.02:55,0,6	0/1:8,1:8:16.45:16,0,27	0/1:13,1:13:8.94:35,0,9	1/1:8,10:18:35.80:283,36,0	1/1:6,5:11:14.91:118,15,0	1/1:15,3:27:30.65:239,31,0	1/1:9,3:12:17.03:149,17,0	1/1:11,10:20:10.14:164,10,0	./.	1/1:4,6:10:12.52:137,13,0	./.	./.	1/1:9,5:13:9.46:77,9,0	./.	1/1:1,3:4:8.97:72,9,0	0/1:5,6:12:9.13:31,0,9	1/1:0,2:2:3:25,3,0
chr10	58044403	.	TA	T	177.24	PASS	AB=0.802;AC=5;AF=0.208;AN=24;BaseQRankSum=-0.482;DP=106;FS=8.018;HRun=15;HaplotypeScore=38.5343;InbreedingCoeff=0.1899;MQ=61.60;MQ0=5;MQRankSum=-1.380;QD=6.11;ReadPosRankSum=-0.229;VQSLOD=1.3459;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,3:5:12.94:69,13,0	./.	0/0:16,0:6:11.83:0,12,100	0/0:18,0:4:2.37:0,2,8	0/1:4,12:14:11.25:189,0,11	0/0:6,0:8:20.68:0,21,160	0/0:5,0:4:11.84:0,12,93	./.	./.	./.	./.	0/0:4,0:3:6:0,6,53	0/1:4,1:5:4.27:4,0,90	0/1:3,0:3:10.19:10,0,44	./.	./.	./.	./.	./.	./.	./.	0/0:6,0:7:17.79:0,18,138	0/0:7,0:6:11.68:0,12,81	0/0:3,0:3:6:0,6,53	./.	./.	./.	./.
chr10	58044521	.	CAGTG	C	13864.96	PASS	AB=0.568;AC=31;AF=0.554;AN=56;BaseQRankSum=11.239;DP=437;FS=24.968;HRun=0;HaplotypeScore=85.8920;InbreedingCoeff=0.9193;MQ=55.93;MQ0=9;MQRankSum=-6.589;QD=51.35;ReadPosRankSum=3.684;VQSLOD=3.4832;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:57.20:0,57,1565	1/1:0,12:12:36.12:718,36,0	0/0:35,0:24:69.19:0,69,1720	0/0:21,0:17:48.13:0,48,1231	0/0:6,0:5:15.05:0,15,420	0/0:10,0:10:30.10:0,30,838	0/0:12,0:12:33.11:0,33,923	0/1:5,16:19:35.79:713,0,36	1/1:1,14:15:42.14:838,42,0	1/1:1,13:14:39.05:736,39,0	1/1:1,10:11:23.79:478,24,0	0/0:10,0:9:27.09:0,27,755	0/0:6,0:6:18.06:0,18,503	0/0:11,0:11:33.11:0,33,896	1/1:1,15:16:45.15:897,45,0	1/1:0,20:20:54:1077,54,0	1/1:0,28:28:78.27:1551,78,0	1/1:0,38:38:99:2176,111,0	1/1:3,10:10:30.09:551,30,0	1/1:0,5:5:15.05:299,15,0	1/1:0,19:19:39.13:778,39,0	0/0:6,0:6:18.06:0,18,505	0/0:8,0:8:21.07:0,21,588	0/0:18,0:18:48.16:0,48,1338	1/1:0,7:7:21.07:419,21,0	1/1:0,14:14:42.14:838,42,0	1/1:3,19:22:48.16:957,48,0	1/1:1,14:15:42.14:838,42,0
chr10	58044825	.	TGTTA	T	2375.50	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.437;DP=654;FS=7.602;HRun=0;HaplotypeScore=105.6938;InbreedingCoeff=0.9990;MQ=90.11;MQ0=0;MQRankSum=-4.974;QD=39.59;ReadPosRankSum=-0.720;VQSLOD=3.6265;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:66.20:0,66,1613	1/1:2,11:13:33.11:593,33,0	0/0:32,0:32:87.30:0,87,2088	0/0:22,0:22:54.18:0,54,1236	0/0:25,0:25:66.23:0,66,1688	0/0:23,0:22:57.20:0,57,1481	0/0:25,0:25:69.24:0,69,1793	1/1:6,25:31:75.24:1278,75,0	0/0:24,0:24:69.24:0,69,1755	0/0:30,0:30:84.29:0,84,2179	0/0:32,0:32:90.29:0,90,2205	0/0:14,0:14:39.13:0,39,1013	0/0:10,0:10:24.08:0,24,593	0/0:17,0:17:45.15:0,45,1167	0/0:21,0:21:60.19:0,60,1458	0/0:19,0:19:48.15:0,48,1159	1/1:2,14:16:36.12:647,36,0	0/0:37,0:37:99:0,108,2695	0/0:23,0:23:66.14:0,66,1500	0/0:37,0:37:99:0,108,2718	0/0:17,0:17:51.17:0,51,1265	0/0:23,0:23:63.19:0,63,1473	0/0:25,0:25:66.23:0,66,1664	0/0:21,0:21:57.18:0,57,1427	0/0:20,0:20:51.18:0,51,1301	0/0:25,0:25:66.22:0,66,1641	0/0:34,0:34:99:0,99,2546	0/0:14,0:14:33.11:0,33,857
chr10	58046326	.	GA	G	12910.14	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=11.126;DP=611;FS=1.042;HRun=5;HaplotypeScore=75.4458;InbreedingCoeff=0.9971;MQ=88.84;MQ0=0;MQRankSum=-5.247;QD=30.96;ReadPosRankSum=3.481;VQSLOD=5.5033;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,32:33:87.25:987,87,0	1/1:0,6:6:15.04:170,15,0	0/0:29,0:29:75.23:0,75,954	0/0:20,0:20:48.76:0,49,569	1/1:1,19:20:60.17:678,60,0	0/0:26,0:26:78.23:0,78,1034	0/0:14,0:14:42.13:0,42,558	1/1:4,27:31:81.22:910,81,0	1/1:1,29:30:81.23:918,81,0	1/1:0,37:37:99:1249,111,0	1/1:1,9:10:24.07:272,24,0	0/0:12,0:12:36.10:0,36,461	0/0:18,0:18:54.17:0,54,722	0/0:20,0:20:60.20:0,60,820	1/1:1,18:19:51.14:579,51,0	1/1:0,22:22:60.17:681,60,0	1/1:1,16:17:42.12:476,42,0	1/1:0,28:28:75.21:851,75,0	1/1:4,16:20:48.14:545,48,0	1/1:1,19:20:54.15:613,54,0	1/1:1,31:32:84.24:953,84,0	0/0:24,0:24:72.23:0,72,968	0/0:21,0:21:54.18:0,54,738	0/0:9,0:9:27.09:0,27,369	1/1:0,25:25:72.21:817,72,0	1/1:0,27:27:81.23:919,81,0	1/1:0,28:28:84.24:953,84,0	1/1:2,10:12:30.08:340,30,0
chr10	58046903	.	C	CTGCAAA	2627.46	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-4.458;DP=719;FS=4.504;HRun=0;HaplotypeScore=141.7553;InbreedingCoeff=0.9876;MQ=87.51;MQ0=0;MQRankSum=-7.578;QD=37.01;ReadPosRankSum=-3.572;VQSLOD=2.8512;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,114,2426	1/1:3,11:15:30.10:946,30,0	0/0:28,0:28:48.15:0,48,982	0/0:24,0:24:45.13:0,45,903	0/0:27,0:27:69.20:0,69,1393	0/0:19,0:19:57.18:0,57,1193	0/0:20,0:20:54.19:0,54,1152	1/1:20,9:31:42.13:1183,42,0	0/0:35,0:35:87.30:0,87,1871	0/0:29,0:29:72.25:0,72,1523	0/0:22,0:22:48.16:0,48,1007	0/0:22,0:22:51.18:0,51,1103	0/0:18,0:18:42.14:0,42,893	0/0:25,0:25:60.15:0,60,1213	0/0:28,0:28:66.23:0,66,1409	0/0:24,0:24:57.20:0,57,1218	1/1:18,7:25:21.54:640,22,0	0/0:25,0:25:60.21:0,60,1272	0/0:30,0:30:66.23:0,66,1412	0/0:30,0:30:81.26:0,81,1696	0/0:44,0:44:99:0,111,2331	0/0:37,0:37:87.28:0,87,1809	0/0:24,0:24:54.19:0,54,1167	0/0:28,0:28:54.13:0,54,1037	0/0:17,0:17:51.18:0,51,1103	0/0:21,0:21:54.18:0,54,1105	0/0:23,0:23:66.17:0,66,1326	0/0:4,0:4:12.04:0,12,260
chr10	58048181	.	GAT	G	8797.17	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=19.241;DP=625;FS=12.284;HRun=0;HaplotypeScore=169.6881;InbreedingCoeff=0.9692;MQ=61.27;MQ0=0;MQRankSum=-18.929;QD=25.65;ReadPosRankSum=0.388;VQSLOD=5.2136;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,118,2119	1/1:1,8:9:24.06:259,24,0	0/0:40,0:38:88.02:0,88,1621	0/0:20,0:20:54.17:0,54,931	0/0:25,0:25:72.25:0,72,1318	0/0:14,0:14:42.14:0,42,770	0/0:26,0:26:75.24:0,75,1344	1/1:4,21:23:60.17:679,60,0	1/1:4,26:30:75.20:823,75,0	1/1:6,32:38:93.18:1038,93,0	1/1:3,20:23:60.11:643,60,0	0/0:17,0:17:51.17:0,51,935	0/0:14,0:14:42.12:0,42,737	0/0:24,0:24:72.25:0,72,1319	1/1:5,21:26:65.95:684,66,0	1/1:2,19:21:57.15:615,57,0	1/1:6,14:19:2.06:350,2,0	1/1:12,14:25:26.50:492,26,0	1/1:6,10:14:27.07:307,27,0	1/1:2,22:24:66.16:712,66,0	1/1:9,11:20:27.07:307,27,0	0/0:22,0:22:66.21:0,66,1179	0/0:18,0:18:54.19:0,54,984	0/0:22,0:22:63.22:0,63,1155	1/1:0,14:14:42.11:452,42,0	1/1:4,16:20:51.13:570,51,0	1/1:3,21:24:63.15:679,63,0	1/1:2,5:7:15.05:188,15,0
chr10	58048187	.	GTTGTT	G	14122.15	PASS	AB=0.561;AC=30;AF=0.536;AN=56;BaseQRankSum=18.504;DP=576;FS=16.949;HRun=0;HaplotypeScore=176.0779;InbreedingCoeff=0.8479;MQ=60.14;MQ0=0;MQRankSum=-19.778;QD=49.55;ReadPosRankSum=1.017;VQSLOD=4.1252;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,126,3821	1/1:0,8:8:24.08:427,24,0	0/0:39,0:37:96.17:0,96,2642	0/0:21,0:21:54.18:0,54,1626	0/0:27,0:27:78.27:0,78,2429	0/0:16,0:16:48.16:0,48,1516	0/0:25,0:25:72.25:0,72,2184	1/1:0,21:20:60.21:1121,60,0	1/1:2,24:26:72.24:1311,72,0	1/1:2,32:34:42.58:1692,43,0	1/1:0,20:20:54.18:957,54,0	0/0:17,0:17:51.15:0,51,1475	0/0:14,0:14:42.13:0,42,1186	0/0:24,0:24:72.25:0,72,2250	1/1:0,21:21:63.21:1124,63,0	1/1:0,19:19:57.20:1036,57,0	0/1:2,14:16:33:613,0,33	0/1:6,14:20:27.87:740,0,28	1/1:0,10:9:27.09:506,27,0	1/1:0,22:22:66.23:1199,66,0	1/1:1,11:12:24.08:422,24,0	0/0:25,0:25:75.26:0,75,2378	0/0:18,0:18:54.19:0,54,1708	0/0:22,0:22:66.23:0,66,2076	1/1:0,14:14:42.14:763,42,0	1/1:0,16:16:48.16:900,48,0	1/1:0,21:21:63.22:1144,63,0	1/1:2,3:5:9.02:168,9,0
chr10	58048192	.	T	TAG	3036.24	PASS	AB=0.898;AC=30;AF=0.536;AN=56;BaseQRankSum=19.542;DP=624;FS=15.178;HRun=0;HaplotypeScore=195.1384;InbreedingCoeff=0.8624;MQ=58.94;MQ0=0;MQRankSum=-18.824;QD=9.37;ReadPosRankSum=0.276;VQSLOD=2.4575;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,132,2145	1/1:10,0:10:15.44:81,15,0	0/0:36,0:34:54.81:0,55,1342	0/0:25,0:25:69.16:0,69,1064	0/0:26,0:26:78.25:0,78,1249	0/0:17,0:17:48.16:0,48,783	0/0:23,0:23:69.22:0,69,1099	1/1:26,0:25:57.16:346,57,0	1/1:26,0:26:42.01:150,42,0	1/1:36,3:40:33.21:544,33,0	1/1:23,0:23:28.15:183,28,0	0/0:17,0:17:51.15:0,51,786	0/0:14,0:14:42.14:0,42,681	0/0:26,0:26:78.24:0,78,1224	1/1:23,0:23:44.43:328,44,0	1/1:20,0:20:38.08:189,38,0	0/1:19,3:21:13.41:145,0,13	0/1:20,2:21:7.89:126,0,8	1/1:14,0:13:32.50:294,32,0	1/1:22,0:22:41.27:172,41,0	1/1:15,1:16:18.63:151,19,0	0/0:29,0:29:78.27:0,78,1272	0/0:18,0:18:54.18:0,54,875	0/0:23,0:23:69.24:0,69,1122	1/1:15,0:15:26.51:128,27,0	1/1:17,0:17:33.14:101,33,0	1/1:23,0:23:40.46:182,40,0	1/1:5,0:5:12.62:142,13,0
chr10	58048573	.	A	AT	11462.43	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=15.121;DP=574;FS=0.333;HRun=5;HaplotypeScore=90.7504;InbreedingCoeff=0.9915;MQ=60.28;MQ0=7;MQRankSum=-0.620;QD=32.94;ReadPosRankSum=1.318;VQSLOD=4.9978;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:57.14:0,57,612	1/1:0,5:5:12.04:158,12,0	0/0:14,0:8:15.03:0,15,157	0/0:16,0:10:17.76:0,18,163	0/0:28,0:28:84.13:0,84,874	0/0:28,0:28:81.20:0,81,870	0/0:13,0:13:33.07:0,33,347	1/1:4,13:15:33.10:420,33,0	1/1:0,28:28:72.23:947,72,0	1/1:2,27:29:81.26:1066,81,0	1/1:2,25:27:72.17:920,72,0	0/0:14,0:14:39.07:0,39,398	0/0:14,0:14:42.08:0,42,440	0/0:18,0:18:51.13:0,51,548	1/1:3,12:15:30.10:395,30,0	1/1:1,17:18:45.15:592,45,0	1/1:1,20:20:51.17:671,51,0	1/1:4,31:35:87.28:1145,87,0	1/1:3,23:24:66.17:835,66,0	1/1:5,28:33:81.22:1035,81,0	1/1:0,10:10:30.10:395,30,0	0/0:26,0:26:69.17:0,69,741	0/0:24,0:24:66.16:0,66,709	0/0:7,0:7:21.05:0,21,226	1/1:3,17:20:48.09:600,48,0	1/1:1,31:32:93.28:1207,93,0	1/1:2,17:19:48.16:632,48,0	1/1:2,11:13:36.09:446,36,0
chr10	58049278	.	C	CTCTA	21220.66	PASS	AB=1.000;AC=33;AF=0.589;AN=56;BaseQRankSum=1.298;DP=585;FS=1.045;HRun=0;HaplotypeScore=104.2152;InbreedingCoeff=0.9238;MQ=64.46;MQ0=7;MQRankSum=-8.156;QD=57.20;ReadPosRankSum=3.107;VQSLOD=6.5765;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:27:32.49:32,0,1302	1/1:0,7:9:18.06:485,18,0	0/0:24,0:23:63.21:0,63,1115	0/0:20,0:18:48.13:0,48,790	0/0:22,0:22:60.19:0,60,1090	0/0:26,0:26:75.26:0,75,1415	0/0:17,0:17:45.63:0,46,844	1/1:9,18:28:66.23:1625,66,0	1/1:1,19:21:48.16:1295,48,0	1/1:4,19:23:63.22:1623,63,0	1/1:1,23:24:57.20:1535,57,0	0/0:15,0:15:45.15:0,45,854	0/0:11,0:11:33.11:0,33,614	0/0:15,0:15:45.15:0,45,845	1/1:2,15:16:45.15:1207,45,0	1/1:3,23:23:57.20:1533,57,0	1/1:1,21:25:54.19:1423,54,0	1/1:4,26:30:78.27:2014,78,0	1/1:2,11:13:36.08:830,36,0	1/1:3,24:28:57.20:1537,57,0	1/1:1,19:20:36.06:972,36,0	0/0:27,0:27:75.23:0,75,1354	0/0:28,0:28:78.27:0,78,1422	0/0:9,0:9:27.09:0,27,505	1/1:0,16:17:45.15:1214,45,0	1/1:2,19:21:63.22:1642,63,0	1/1:4,25:29:66.23:1769,66,0	1/1:0,5:6:18.06:485,18,0
chr10	58049478	.	T	TTTC	11869.45	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=-7.411;DP=533;FS=1.205;HRun=0;HaplotypeScore=76.7948;InbreedingCoeff=0.9751;MQ=54.40;MQ0=5;MQRankSum=-5.880;QD=38.04;ReadPosRankSum=0.179;VQSLOD=4.9610;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:35.81:0,36,485	1/1:4,10:14:27.09:544,27,0	0/0:19,0:9:7.44:0,7,190	0/0:19,0:13:15.68:0,16,268	0/0:32,0:32:81.18:0,81,1099	0/0:26,0:26:78.21:0,78,1132	0/0:16,0:16:36.12:0,36,551	1/1:7,20:27:60.10:909,60,0	1/1:6,9:14:36.09:657,36,0	1/1:3,16:18:41.98:587,42,0	1/1:11,11:23:47.97:835,48,0	0/0:14,0:14:33.06:0,33,464	0/0:15,0:15:42.13:0,42,624	0/0:20,0:20:54.17:0,54,793	1/1:5,11:16:30.10:623,30,0	1/1:2,18:21:54.19:1121,54,0	1/1:5,14:18:9.62:541,10,0	1/1:11,6:17:35.92:518,36,0	1/1:10,6:15:33.07:586,33,0	1/1:12,19:30:81.13:1490,81,0	1/1:6,4:9:12.03:212,12,0	0/0:14,0:14:36.12:0,36,553	0/0:18,0:18:48.11:0,48,674	0/0:16,0:16:48.16:0,48,737	1/1:8,8:16:38.98:619,39,0	1/1:9,10:19:42.07:735,42,0	1/1:7,21:27:57.19:1151,57,0	1/1:11,9:20:45.07:742,45,0
chr10	58049527	.	C	CAA	6405.55	PASS	AB=1.000;AC=32;AF=0.571;AN=56;BaseQRankSum=-0.592;DP=407;FS=6.925;HRun=9;HaplotypeScore=69.8211;InbreedingCoeff=0.8833;MQ=68.53;MQ0=0;MQRankSum=-4.696;QD=26.36;ReadPosRankSum=-1.351;VQSLOD=4.2010;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:2,0:12:19.96:69,20,0	0/0:11,0:11:24.04:0,24,255	0/1:14,0:13:3.97:4,0,167	0/1:7,0:5:1.30:1,0,21	1/1:4,0:23:44.79:154,45,0	0/0:24,0:24:63.13:0,63,670	0/0:15,0:15:42.05:0,42,434	0/0:16,0:17:36.04:0,36,438	1/1:3,10:13:30.10:462,30,0	1/1:6,4:10:21.07:322,21,0	1/1:3,20:24:54.02:726,54,0	0/0:6,0:6:15.03:0,15,160	0/0:10,0:10:18.01:0,18,192	0/0:20,0:20:51.10:0,51,543	1/1:2,7:9:24.08:368,24,0	1/1:2,8:11:24.08:352,24,0	0/0:7,0:8:5.54:0,6,118	1/1:1,3:9:21.51:181,22,0	1/1:1,14:16:44.64:655,45,0	1/1:4,19:24:56.93:705,57,0	1/1:2,6:8:18.06:276,18,0	0/0:16,0:16:32.78:0,33,331	0/0:22,0:22:57.12:0,57,607	0/0:15,0:15:42.11:0,42,447	1/1:1,14:15:36.04:501,36,0	1/1:2,16:22:55.65:760,56,0	1/1:7,8:15:33.11:499,33,0	1/1:2,8:10:24.08:369,24,0
chr10	58049707	.	CT	C	1465.40	PASS	AB=0.753;AC=24;AF=0.429;AN=56;BaseQRankSum=3.616;DP=392;FS=1.189;HRun=15;HaplotypeScore=45.0803;InbreedingCoeff=0.4981;MQ=48.18;MQ0=11;MQRankSum=-0.771;QD=6.69;ReadPosRankSum=2.081;VQSLOD=2.1339;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:7:11.94:0,12,95	0/0:7,0:8:5.80:0,6,33	0/0:15,1:6:5.98:0,6,47	0/0:9,0:1:2.68:0,3,11	0/0:30,1:30:35.98:0,36,416	0/0:14,0:14:32.91:0,33,275	0/1:9,1:8:13.27:13,0,20	0/0:16,0:12:2.98:0,3,22	1/1:1,4:5:2.95:19,3,0	1/1:6,12:18:19.42:179,19,0	1/1:10,12:25:7.55:147,8,0	0/0:9,0:8:5.99:0,6,50	0/0:7,0:7:2.96:0,3,19	0/0:16,0:14:14.70:0,15,101	1/1:5,9:16:24.65:146,25,0	1/1:10,12:22:5.70:120,6,0	0/0:3,0:11:8.52:0,9,43	0/1:11,3:15:25.64:73,0,26	1/1:8,7:11:23.23:145,23,0	1/1:8,12:22:12.25:183,12,0	1/1:1,9:9:17.68:115,18,0	0/0:8,0:8:15:0,15,132	0/0:13,0:15:4.79:0,5,118	0/0:4,0:4:3:0,3,26	0/1:6,6:13:6.60:82,0,7	1/1:6,9:15:26.53:173,27,0	1/1:4,13:19:27.37:164,27,0	0/1:4,6:10:20.42:95,0,20
chr10	58060163	.	G	GTTTTTTGTTTTTTTGTTT	20480.11	PASS	AB=0.868;AC=30;AF=0.536;AN=56;BaseQRankSum=1.718;DP=438;FS=0.000;HRun=0;HaplotypeScore=164.3918;InbreedingCoeff=0.6631;MQ=49.77;MQ0=7;MQRankSum=-10.864;QD=75.57;ReadPosRankSum=-2.194;VQSLOD=3.7335;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:28:81.25:0,81,3286	1/1:8,0:6:6.01:175,6,0	0/1:13,0:5:8.59:9,0,74	0/0:12,0:4:2.98:0,3,21	0/0:28,0:28:69.24:0,69,3268	0/0:23,0:23:63.21:0,63,2903	0/0:4,0:5:15.03:0,15,422	0/1:24,0:18:57.21:295,0,57	1/1:5,0:10:21.07:1339,21,0	1/1:13,8:22:48.10:2732,48,0	1/1:5,3:11:21.07:1093,21,0	0/0:9,0:11:27.09:0,27,1293	0/0:12,0:12:36.11:0,36,1392	0/0:7,0:7:21.04:0,21,779	1/1:8,7:18:27.04:1784,27,0	1/1:5,0:18:24.08:1140,24,0	0/1:5,0:6:99:145,0,199	0/1:4,0:13:40.82:41,0,152	1/1:5,3:12:27.04:1072,27,0	1/1:9,8:20:30.08:1189,30,0	1/1:7,0:7:6.01:377,6,0	0/0:17,0:16:45.10:0,45,1903	0/0:14,0:14:39.13:0,39,1450	0/0:10,0:10:27.09:0,27,1121	1/1:6,5:13:27.05:1535,27,0	1/1:8,10:22:54:3009,54,0	1/1:18,11:36:54.17:3213,54,0	1/1:2,8:11:18.06:1333,18,0
chr10	58060166	.	T	TTTTG	3088.02	PASS	AB=0.995;AC=24;AF=0.429;AN=56;BaseQRankSum=13.407;DP=369;FS=2.788;HRun=0;HaplotypeScore=118.8722;InbreedingCoeff=0.4196;MQ=50.13;MQ0=5;MQRankSum=-11.853;QD=15.92;ReadPosRankSum=2.973;VQSLOD=3.6077;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:87.10:0,87,1425	1/1:7,0:5:5.95:44,6,0	0/1:14,0:5:8.50:8,0,98	0/0:10,0:3:3.01:0,3,45	0/0:27,0:27:69.24:0,69,1252	0/0:22,0:22:63.21:0,63,1133	0/0:6,0:6:15.03:0,15,197	0/1:21,0:15:32.88:33,0,110	1/1:7,1:8:21.05:320,21,0	0/1:19,0:19:12.95:336,0,13	0/1:8,0:8:7.14:170,0,7	0/0:9,0:9:27.02:0,27,440	0/0:12,0:12:36.11:0,36,632	0/0:7,0:7:21.06:0,21,351	0/1:13,0:12:24.06:294,0,24	0/1:15,0:15:19.64:197,0,20	0/0:7,0:5:4.73:0,5,38	0/1:12,0:11:0.08:134,0,0	1/1:7,0:6:8.89:116,9,0	1/1:8,0:8:17.35:157,17,0	1/1:5,3:8:5.92:66,6,0	0/0:18,0:17:48.10:0,48,792	0/0:16,0:16:45.13:0,45,771	0/0:11,0:11:30.09:0,30,522	1/1:9,0:9:23.86:320,24,0	1/1:13,0:12:9.96:379,10,0	0/1:25,1:24:1.56:472,0,2	1/1:6,0:6:17.52:231,18,0
chr10	58060997	.	A	AAT	1820.98	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.336;DP=585;FS=14.873;HRun=0;HaplotypeScore=95.4765;InbreedingCoeff=0.9931;MQ=66.22;MQ0=1;MQRankSum=-8.035;QD=49.22;ReadPosRankSum=-1.710;VQSLOD=2.9059;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:36.12:0,36,567	1/1:2,9:11:27.09:538,27,0	0/0:21,0:19:54.06:0,54,795	0/0:20,0:18:45.07:0,45,599	0/0:26,0:26:72.20:0,72,1092	0/0:29,0:29:87.26:0,87,1363	0/0:9,0:9:24.08:0,24,391	1/1:8,12:21:59.33:1123,59,0	0/0:21,0:21:63.22:0,63,1021	0/0:32,0:32:90.27:0,90,1422	0/0:19,0:19:54.17:0,54,857	0/0:16,0:16:48.16:0,48,778	0/0:24,0:24:72.23:0,72,1141	0/0:13,0:13:39.13:0,39,628	0/0:19,0:19:57.19:0,57,915	0/0:27,0:27:78.27:0,78,1270	1/1:0,5:5:15.05:301,15,0	0/0:40,0:40:99:0,114,1805	0/0:18,0:18:54.16:0,54,838	0/0:24,0:24:72.25:0,72,1166	0/0:24,0:24:72.22:0,72,1147	0/0:32,0:32:96.30:0,96,1510	0/0:15,0:15:39.13:0,39,636	0/0:14,0:14:42.13:0,42,653	0/0:22,0:22:63.20:0,63,999	0/0:25,0:25:69.23:0,69,1099	0/0:28,0:28:81.26:0,81,1292	0/0:16,0:16:42.09:0,42,609
chr10	58061478	.	A	AT	10255.21	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=2.635;DP=547;FS=4.738;HRun=8;HaplotypeScore=62.3281;InbreedingCoeff=0.9949;MQ=60.48;MQ0=0;MQRankSum=-2.005;QD=28.49;ReadPosRankSum=0.008;VQSLOD=5.2759;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:69.03:0,69,628	1/1:0,6:6:18.05:208,18,0	0/0:10,0:9:17.98:0,18,160	0/0:9,0:9:14.90:0,15,118	0/0:22,0:22:60.02:0,60,545	0/0:22,0:22:57.01:0,57,517	0/0:18,0:18:51:0,51,460	1/1:6,19:25:32.67:615,33,0	1/1:1,14:15:39.12:450,39,0	1/1:3,27:30:56.79:885,57,0	1/1:2,21:23:66.19:756,66,0	0/0:11,0:11:30:0,30,270	0/0:11,0:11:27:0,27,242	0/0:15,0:15:36.01:0,36,329	1/1:2,19:21:51.15:589,51,0	1/1:2,10:12:27.08:312,27,0	1/1:4,29:34:62.54:847,63,0	1/1:4,25:29:75.06:845,75,0	1/1:4,17:21:29.80:567,30,0	1/1:5,29:35:87.09:982,87,0	1/1:2,18:20:54.16:623,54,0	0/0:11,0:11:30.01:0,30,275	0/0:18,0:18:48.03:0,48,439	0/0:16,0:16:44.96:0,45,398	1/1:5,19:24:48.14:554,48,0	1/1:1,27:28:81.21:914,81,0	1/1:0,21:21:57.17:658,57,0	1/1:1,15:16:39.12:450,39,0
chr10	58063070	.	CTTTTG	C	16092.57	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=15.113;DP=570;FS=2.979;HRun=0;HaplotypeScore=106.8282;InbreedingCoeff=0.9759;MQ=54.14;MQ0=11;MQRankSum=-5.235;QD=45.72;ReadPosRankSum=2.203;VQSLOD=5.1113;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:78.20:0,78,2214	1/1:0,9:9:24.08:490,24,0	0/0:21,0:8:9.73:0,10,441	0/0:18,0:10:27.09:0,27,667	0/0:31,0:31:90.31:0,90,2684	0/0:27,0:27:72.25:0,72,2125	0/0:10,0:10:27.08:0,27,758	1/1:8,19:17:33.10:575,33,0	1/1:2,11:13:33.11:676,33,0	1/1:1,25:26:75.25:1490,75,0	1/1:1,20:21:60.21:1212,60,0	0/0:12,0:12:36.12:0,36,1049	0/0:10,0:10:30.10:0,30,873	0/0:12,0:12:33.11:0,33,1006	1/1:2,12:14:33.11:676,33,0	1/1:2,11:13:33.11:677,33,0	1/1:5,11:16:17.85:609,18,0	1/1:8,37:46:45.80:1721,46,0	1/1:3,21:21:57.10:1013,57,0	1/1:1,28:29:69.17:1369,69,0	1/1:2,20:23:6.31:938,6,0	0/0:17,0:17:51.18:0,51,1491	0/0:18,0:18:51.17:0,51,1518	0/0:11,0:11:27.09:0,27,823	1/1:1,26:27:63.22:1290,63,0	1/1:1,28:28:81.25:1588,81,0	1/1:2,26:28:69.24:1402,69,0	1/1:1,6:7:18.06:369,18,0
chr10	58063315	.	A	AT	1184.98	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.604;DP=554;FS=0.630;HRun=8;HaplotypeScore=75.9689;InbreedingCoeff=0.9644;MQ=61.03;MQ0=1;MQRankSum=-0.303;QD=26.33;ReadPosRankSum=0.409;VQSLOD=4.1777;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:53.24:0,53,473	0/0:4,0:5:14.04:0,14,116	0/0:19,0:11:30:0,30,267	0/0:15,0:8:16.75:0,17,145	0/0:27,0:27:72.04:0,72,659	0/0:30,0:30:75.02:0,75,682	0/0:12,0:12:30.01:0,30,275	0/0:28,0:27:62.98:0,63,573	0/0:18,0:18:51.03:0,51,467	0/0:25,0:24:66:0,66,597	0/0:19,0:19:54.03:0,54,494	0/0:12,0:12:30:0,30,275	0/0:14,0:14:42:0,42,379	0/0:15,0:15:39.02:0,39,357	0/0:16,0:16:42.02:0,42,384	0/0:8,0:8:21.01:0,21,192	0/0:25,0:25:60.02:0,60,545	1/1:3,41:45:99:1280,111,0	0/0:18,0:18:44.98:0,45,399	0/0:31,0:32:89.03:0,89,790	0/0:22,0:21:60:0,60,540	0/0:16,0:16:45.01:0,45,408	0/0:18,0:18:39.01:0,39,357	0/0:16,0:17:47.06:0,47,418	0/0:16,0:16:42.02:0,42,384	0/0:26,0:26:72.04:0,72,659	0/0:25,0:25:75.04:0,75,685	0/0:10,0:10:30.02:0,30,275
chr10	58063508	.	AT	A	1302.81	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=8.137;DP=559;FS=0.572;HRun=6;HaplotypeScore=61.4671;InbreedingCoeff=0.9792;MQ=61.00;MQ0=2;MQRankSum=-0.293;QD=23.69;ReadPosRankSum=3.180;VQSLOD=3.1287;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:69.12:0,69,852	0/0:11,0:11:30.06:0,30,376	0/0:17,0:14:41.68:0,42,465	0/0:12,0:8:14.42:0,14,171	0/0:27,0:27:78.24:0,78,1011	0/0:17,0:17:48.16:0,48,632	0/0:9,0:9:27.09:0,27,355	0/0:29,0:27:72.23:0,72,932	0/0:16,0:16:39.13:0,39,513	0/0:28,0:28:78.25:0,78,1014	0/0:27,0:27:81.26:0,81,1063	0/0:11,0:11:33.11:0,33,434	0/0:11,0:11:33.11:0,33,434	0/0:11,0:11:30.08:0,30,378	0/0:15,0:14:45.15:0,45,592	0/0:15,0:15:45.14:0,45,578	0/0:28,0:28:66.85:0,67,824	1/1:7,48:55:99:1398,113,0	0/0:19,0:18:45.15:0,45,592	0/0:27,0:27:78.25:0,78,1025	0/0:12,0:12:36.11:0,36,459	0/0:12,0:12:36.10:0,36,446	0/0:16,0:16:45.14:0,45,578	0/0:19,0:19:48.16:0,48,632	0/0:17,0:17:45.11:0,45,561	0/0:28,0:27:81.26:0,81,1065	0/0:31,0:31:87.27:0,87,1128	0/0:13,0:13:36.12:0,36,474
chr10	58065589	.	GGT	G	827.83	PASS	AB=0.920;AC=12;AF=0.214;AN=56;BaseQRankSum=-0.438;DP=659;FS=0.000;HRun=0;HaplotypeScore=111.0617;InbreedingCoeff=0.3368;MQ=71.57;MQ0=11;MQRankSum=1.898;QD=3.76;ReadPosRankSum=1.402;VQSLOD=2.5618;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:15,15:30:20.82:445,21,0	0/0:14,0:14:11.20:0,11,66	0/0:28,0:17:1.82:0,2,5	0/0:37,0:25:4.26:0,4,48	1/1:13,14:27:35.42:363,35,0	0/1:28,4:33:37.39:37,0,668	0/1:26,3:29:45.26:45,0,262	0/0:41,0:39:36.62:0,37,294	0/0:16,0:16:39.02:0,39,413	0/0:13,0:19:39.02:0,39,411	0/0:15,0:15:14.71:0,15,145	0/0:23,0:23:33.10:0,33,478	0/1:18,2:20:9.68:10,0,235	0/0:24,0:24:45.07:0,45,646	0/0:16,0:16:15.01:0,15,150	1/1:17,0:17:12.13:55,12,0	0/0:18,0:18:5.92:0,6,45	0/0:31,0:31:41.73:0,42,327	0/1:14,0:14:7.65:8,0,102	0/0:26,0:26:35.97:0,36,344	0/0:39,0:39:38.60:0,39,420	0/1:18,1:19:0.62:1,0,415	0/0:19,0:19:5.76:0,6,488	0/1:26,5:31:21.89:22,0,519	0/0:19,0:19:27.04:0,27,303	0/0:22,0:22:23.99:0,24,195	0/0:16,0:16:29.88:0,30,289	0/0:14,0:13:18.49:0,18,219
chr10	58065614	.	G	GTA	868.93	PASS	AB=0.960;AC=11;AF=0.196;AN=56;BaseQRankSum=9.674;DP=664;FS=2.899;HRun=0;HaplotypeScore=110.7563;InbreedingCoeff=-0.2593;MQ=57.04;MQ0=17;MQRankSum=-1.791;QD=3.33;ReadPosRankSum=5.561;VQSLOD=1.9433;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:79.91:0,80,594	0/1:10,0:10:7.44:7,0,23	0/0:46,0:21:53.15:0,53,553	0/0:33,0:14:38.90:0,39,384	0/0:23,0:23:62.49:0,62,462	0/0:30,0:30:56.70:0,57,833	0/0:20,0:20:0.78:0,1,446	0/1:35,0:33:41.29:41,0,226	0/1:18,0:18:30.48:30,0,261	0/1:27,0:26:15.75:16,0,384	0/0:13,0:13:3.63:0,4,170	0/0:20,0:20:57.03:0,57,667	0/0:20,0:20:53.82:0,54,525	0/0:24,0:25:67.42:0,67,844	0/1:14,0:14:50.34:50,0,132	0/0:20,0:20:26.91:0,27,270	0/0:20,0:20:3.51:0,4,64	0/1:7,28:35:20.59:680,0,21	0/0:12,0:11:5.17:0,5,165	0/1:28,0:26:85.96:86,0,253	0/1:36,0:34:51.95:52,0,346	0/0:27,0:26:74.48:0,74,768	0/0:19,0:19:56.92:0,57,676	0/0:29,0:29:67.24:0,67,744	0/1:20,0:20:36.47:36,0,260	0/1:21,0:21:1.44:1,0,286	0/1:17,0:17:2.73:3,0,277	0/0:14,0:12:4.65:0,5,185
chr10	58065616	.	G	GTGTGTGTA	903.40	PASS	AB=0.917;AC=7;AF=0.125;AN=56;BaseQRankSum=3.661;DP=674;FS=11.589;HRun=0;HaplotypeScore=184.5542;InbreedingCoeff=0.1742;MQ=59.93;MQ0=16;MQRankSum=-1.631;QD=6.27;ReadPosRankSum=-1.172;VQSLOD=1.4865;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:68.84:0,69,976	1/1:9,1:10:15.02:306,15,0	0/0:46,0:23:49.60:0,50,508	0/0:31,0:14:34.26:0,34,376	0/0:23,0:23:48.06:0,48,751	0/0:31,0:31:75.09:0,75,1361	0/0:20,0:20:38.56:0,39,695	0/1:38,0:36:82.63:379,0,83	0/0:18,0:18:38.22:0,38,354	0/0:28,0:27:56.06:0,56,437	0/0:13,0:13:13.67:0,14,138	0/0:21,0:21:54.04:0,54,952	0/0:21,0:21:53.68:0,54,730	0/0:24,0:24:62.99:0,63,1194	0/0:13,0:13:29.86:0,30,280	0/0:21,0:21:22.60:0,23,360	0/1:7,13:24:12.93:249,0,13	0/1:33,0:33:48.08:48,0,322	0/0:15,0:14:20.81:0,21,252	0/0:28,0:26:44.48:0,44,389	0/0:36,0:34:21.26:0,21,375	0/0:28,0:27:71.49:0,71,1072	0/0:19,0:19:54.04:0,54,1030	0/0:29,0:29:64.62:0,65,1202	0/0:19,0:19:38.13:0,38,458	0/1:22,0:22:46.78:47,0,330	0/1:17,0:17:5.25:5,0,274	0/0:13,0:11:1.91:0,2,251
chr10	58065622	.	GTGTT	G	2171.05	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=-5.746;DP=678;FS=4.420;HRun=0;HaplotypeScore=130.1787;InbreedingCoeff=-0.2671;MQ=65.37;MQ0=12;MQRankSum=0.112;QD=6.12;ReadPosRankSum=-7.217;VQSLOD=-0.3859;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:67.63:0,68,684	0/1:11,0:11:55.36:55,0,56	0/0:47,0:27:77.96:0,78,804	0/0:32,0:16:35.19:0,35,432	0/0:20,0:20:47.76:0,48,379	0/0:30,0:30:75.13:0,75,1484	0/0:19,0:19:39.26:0,39,654	0/1:38,0:37:99:401,0,128	0/1:19,0:19:89.75:90,0,337	0/1:32,0:31:99:333,0,316	0/1:15,0:15:74.93:87,0,75	0/0:21,0:21:57.13:0,57,1084	0/0:23,0:23:54.07:0,54,784	0/0:25,0:25:69.12:0,69,1272	0/1:13,0:13:99:114,0,125	1/1:3,18:21:18.01:333,18,0	0/1:20,0:20:13.97:14,0,27	0/1:36,0:36:49.71:50,0,289	0/1:16,0:15:99:135,0,100	0/1:27,0:25:65.49:65,0,320	0/1:35,0:33:99:116,0,375	0/0:27,0:26:78.13:0,78,1287	0/0:20,0:20:54.11:0,54,1051	0/0:27,0:27:66.14:0,66,1291	0/1:19,0:19:99:106,0,238	0/1:22,0:22:99:214,0,113	0/1:17,0:17:99:124,0,188	0/1:14,0:13:99:101,0,210
chr10	58066874	.	ATG	A	3555.56	PASS	AB=0.834;AC=45;AF=0.865;AN=52;BaseQRankSum=2.927;DP=692;FS=4.087;HRun=0;HaplotypeScore=112.0561;InbreedingCoeff=0.2017;MQ=67.69;MQ0=14;MQRankSum=-0.985;QD=5.93;ReadPosRankSum=-1.826;VQSLOD=2.8376;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:28,8:38:26.91:276,27,0	1/1:5,0:9:11.36:56,11,0	./.	./.	1/1:11,4:18:17.88:178,18,0	1/1:14,1:28:22.89:131,23,0	1/1:11,0:23:31.25:154,31,0	1/1:21,0:21:2.04:6,2,0	1/1:17,11:29:35.76:355,36,0	0/1:21,5:26:6.03:156,0,6	1/1:5,8:13:24.02:249,24,0	1/1:7,0:15:19.89:98,20,0	0/1:18,3:21:13.74:14,0,369	0/1:16,3:18:20.70:21,0,122	1/1:9,8:19:29.88:253,30,0	0/0:6,0:15:9:0,9,79	1/1:22,0:36:31.25:172,31,0	0/1:25,0:33:4.24:4,0,205	1/1:19,2:21:8.86:79,9,0	1/1:17,8:25:21.05:229,21,0	1/1:34,12:47:23.41:242,23,0	1/1:11,1:25:31.42:172,31,0	1/1:8,0:16:13.88:70,14,0	1/1:18,0:32:28.21:147,28,0	1/1:8,6:14:11.87:112,12,0	1/1:25,4:29:6.01:65,6,0	0/1:21,7:29:20.63:205,0,21	1/1:9,0:9:14.66:113,15,0
chr10	58067817	.	TAGATATATTCTTCC	T	26946.92	PASS	AB=0.516;AC=23;AF=0.411;AN=56;BaseQRankSum=19.351;DP=652;FS=12.409;HRun=0;HaplotypeScore=269.7399;InbreedingCoeff=0.9382;MQ=79.48;MQ0=0;MQRankSum=-17.929;QD=97.28;ReadPosRankSum=3.816;VQSLOD=3.5054;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,120,7506	0/0:12,0:12:36.12:0,36,2529	0/0:24,0:24:69.19:0,69,3795	0/0:18,0:18:51.17:0,51,3017	0/0:30,0:30:90.31:0,90,6253	0/0:22,0:22:66.23:0,66,4236	0/0:20,0:20:60.21:0,60,3540	0/0:36,0:36:99:0,106,5643	1/1:0,31:31:69.24:3052,69,0	1/1:0,22:22:66.23:2731,66,0	1/1:1,23:24:33.11:1430,33,0	0/0:27,0:27:81.27:0,81,5123	0/0:19,0:19:57.20:0,57,3995	0/0:11,0:11:33.11:0,33,2379	1/1:0,20:20:42.14:1858,42,0	1/1:0,33:33:96.33:4230,96,0	0/0:16,0:16:48.16:0,48,2909	0/0:17,0:17:51.18:0,51,3525	1/1:0,9:9:27.07:814,27,0	1/1:0,45:45:96.29:3920,96,0	0/1:1,15:16:6.94:645,0,7	0/0:28,0:28:84.29:0,84,5602	0/0:28,0:28:84.29:0,84,5051	0/0:27,0:27:81.23:0,81,5240	1/1:0,25:25:57.20:2520,57,0	1/1:0,21:21:63.20:2431,63,0	1/1:0,22:22:51.09:2253,51,0	1/1:0,9:9:24.08:1062,24,0
chr10	58068096	.	AAG	A	2028.77	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.959;DP=572;FS=22.893;HRun=0;HaplotypeScore=93.3300;InbreedingCoeff=0.9780;MQ=81.67;MQ0=0;MQRankSum=-4.556;QD=32.20;ReadPosRankSum=-1.553;VQSLOD=3.0008;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,138,2473	1/1:2,5:7:9.03:126,9,0	0/0:21,0:21:54.09:0,54,864	0/0:14,0:14:26.55:0,27,469	0/0:21,0:21:60.19:0,60,1063	0/0:21,0:21:60.21:0,60,1090	0/0:23,0:23:69.24:0,69,1255	1/1:2,27:29:78.25:1074,78,0	0/0:23,0:23:69.24:0,69,1237	0/0:20,0:20:54.19:0,54,964	0/0:22,0:22:63.22:0,63,1111	0/0:17,0:17:48.16:0,48,873	0/0:17,0:17:51.17:0,51,934	0/0:13,0:13:39.13:0,39,714	0/0:19,0:19:57.19:0,57,1001	0/0:9,0:9:27.05:0,27,436	1/1:1,26:27:69.23:966,69,0	0/0:22,0:22:54.12:0,54,877	0/0:21,0:21:57.19:0,57,1003	0/0:18,0:18:48.16:0,48,858	0/0:37,0:37:99:0,105,1873	0/0:15,0:15:45.15:0,45,825	0/0:19,0:19:54.17:0,54,955	0/0:19,0:19:57.20:0,57,1033	0/0:11,0:11:33.11:0,33,591	0/0:29,0:29:81.28:0,81,1460	0/0:16,0:16:45.12:0,45,749	0/0:15,0:15:45.13:0,45,779
chr10	58068252	.	TA	T	7726.43	PASS	AB=0.938;AC=34;AF=0.607;AN=56;BaseQRankSum=14.219;DP=467;FS=3.570;HRun=7;HaplotypeScore=79.4780;InbreedingCoeff=0.8535;MQ=68.71;MQ0=0;MQRankSum=-1.109;QD=23.13;ReadPosRankSum=0.960;VQSLOD=4.9377;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:60.15:0,60,708	1/1:1,7:8:18.04:183,18,0	0/1:6,1:6:10.18:10,0,29	0/1:8,0:6:11.26:11,0,54	0/0:22,0:22:57.14:0,57,671	0/0:16,0:16:48.14:0,48,587	0/0:10,0:10:27.02:0,27,302	1/1:6,27:33:81.07:785,81,0	1/1:0,10:10:27.06:275,27,0	1/1:3,18:21:53.38:494,53,0	1/1:6,17:23:53.79:530,54,0	0/0:9,0:9:24.07:0,24,299	0/0:8,0:8:18.03:0,18,198	0/0:13,0:13:30.09:0,30,373	1/1:0,14:14:30.07:305,30,0	1/1:0,8:8:21.05:214,21,0	1/1:4,16:20:57.09:561,57,0	1/1:1,23:24:62.94:630,63,0	1/1:6,17:23:50.86:487,51,0	1/1:7,32:39:98.45:951,98,0	1/1:0,4:4:12.03:122,12,0	0/0:8,0:8:24.08:0,24,299	0/0:18,0:18:48.15:0,48,597	0/0:8,0:8:21.05:0,21,248	1/1:4,26:30:54.01:535,54,0	1/1:7,20:27:68.81:672,69,0	1/1:4,22:26:68.89:684,69,0	1/1:0,9:9:27.06:275,27,0
chr10	58068757	.	G	GA	2058.45	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=0.040;DP=610;FS=0.454;HRun=9;HaplotypeScore=80.4487;InbreedingCoeff=0.8517;MQ=64.97;MQ0=8;MQRankSum=0.817;QD=18.06;ReadPosRankSum=0.619;VQSLOD=3.6968;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,135,1168	1/1:1,5:6:9.02:100,9,0	0/0:18,0:15:18.18:0,18,282	0/1:14,0:13:4.97:5,0,172	0/0:22,0:21:50.95:0,51,435	0/0:16,0:16:11.56:0,12,315	0/0:28,0:26:56.95:0,57,494	1/1:7,12:18:39.08:419,39,0	0/0:25,1:26:20.77:0,21,406	0/0:32,0:32:82.97:0,83,702	0/0:19,0:19:35.98:0,36,312	0/0:11,0:11:32.99:0,33,286	0/0:15,0:15:38.99:0,39,338	0/0:11,0:11:26.99:0,27,234	0/0:17,0:17:44.96:0,45,386	0/0:14,0:14:38.96:0,39,333	1/1:2,32:33:75.20:829,75,0	1/1:5,35:39:80.93:864,81,0	0/0:20,0:19:53.96:0,54,464	0/0:20,0:19:50.98:0,51,441	0/0:20,0:20:56.98:0,57,494	0/0:24,0:25:70.82:0,71,591	0/0:17,0:17:44.98:0,45,391	0/0:35,0:34:89.98:0,90,781	0/0:27,0:27:68.97:0,69,599	0/0:22,0:21:53.97:0,54,466	0/0:23,0:22:62.99:0,63,547	0/0:8,0:7:7.64:0,8,97
chr10	58069173	.	A	AT	18090.49	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=-10.362;DP=815;FS=5.574;HRun=1;HaplotypeScore=81.3885;InbreedingCoeff=0.9986;MQ=88.77;MQ0=0;MQRankSum=-3.178;QD=40.74;ReadPosRankSum=4.122;VQSLOD=5.3596;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,135,1719	1/1:2,7:9:18.06:270,18,0	0/0:30,0:30:87.24:0,87,1079	0/0:31,0:31:78.21:0,78,1016	0/0:32,0:32:96.31:0,96,1245	0/0:27,0:27:78.25:0,78,1011	0/0:41,0:41:99:0,120,1558	1/1:5,27:32:84.27:1229,84,0	1/1:2,35:37:99:1520,102,0	1/1:2,31:33:93.30:1372,93,0	1/1:0,20:20:60.20:899,60,0	0/0:26,0:26:78.25:0,78,1013	0/0:22,0:22:63.16:0,63,784	0/0:34,0:34:99:0,102,1323	1/1:1,37:38:99:1619,108,0	1/1:3,25:28:36.30:1039,36,0	1/1:0,33:33:93.32:1394,93,0	1/1:0,33:33:99:1484,99,0	1/1:1,21:22:63.21:938,63,0	1/1:0,26:26:72.24:1078,72,0	1/1:0,35:35:87.29:1304,87,0	0/0:24,0:24:72.23:0,72,935	0/0:21,0:21:63.17:0,63,788	0/0:36,0:36:99:0,105,1343	1/1:0,22:22:57.19:854,57,0	1/1:1,26:27:81.27:1202,81,0	1/1:4,37:41:99:1528,102,0	1/1:0,8:8:24.08:360,24,0
chr10	58077459	.	A	AG	3989.42	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=11.132;DP=469;FS=90.695;HRun=0;HaplotypeScore=258.2836;InbreedingCoeff=0.9050;MQ=63.11;MQ0=15;MQRankSum=-11.906;QD=19.95;ReadPosRankSum=0.867;VQSLOD=-0.3540;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:30:75.25:0,75,1047	1/1:7,0:7:17.24:184,17,0	0/0:30,0:22:63.20:0,63,843	0/0:18,0:13:33.05:0,33,395	0/0:17,0:15:44.94:0,45,536	0/0:23,0:23:48.09:0,48,646	0/0:42,0:42:99:0,123,1687	1/1:11,5:15:44.94:552,45,0	1/1:14,0:14:22.52:243,23,0	1/1:19,0:18:13.97:369,14,0	1/1:13,0:13:20.53:215,21,0	0/0:10,0:10:27.09:0,27,376	0/0:23,0:22:48:0,48,669	0/0:12,0:12:33.11:0,33,460	1/1:18,1:18:17.88:304,18,0	1/1:8,0:8:11.80:126,12,0	1/1:5,0:5:7.12:100,7,0	1/1:9,3:11:9.56:143,10,0	1/1:7,0:6:15.04:178,15,0	1/1:17,3:20:25.87:388,26,0	1/1:3,2:4:3.01:44,3,0	0/0:18,0:18:45.15:0,45,627	0/0:17,0:17:35.96:0,36,435	0/0:26,0:24:57.15:0,57,774	1/1:14,3:17:11.91:316,12,0	1/1:8,0:7:5.07:98,5,0	1/1:24,1:25:45.98:643,46,0	1/1:5,0:5:5.03:87,5,0
chr10	58079667	.	AACACACACACAC	A	2725.56	PASS	AC=20;AF=0.455;AN=44;BaseQRankSum=7.493;DP=547;FS=5.703;HRun=0;HaplotypeScore=177.9742;InbreedingCoeff=0.7804;MQ=61.03;MQ0=37;MQRankSum=-6.258;QD=15.57;ReadPosRankSum=0.898;VQSLOD=2.0517;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:30:33.09:0,33,1269	1/1:6,0:8:3.01:90,3,0	./.	./.	0/0:20,0:20:42.08:0,42,1186	0/0:11,0:11:15.03:0,15,506	0/0:18,0:16:24.06:0,24,855	0/0:17,0:15:2.65:0,3,91	1/1:6,6:11:6.02:196,6,0	1/1:4,3:7:12.04:408,12,0	./.	0/0:18,0:18:9.01:0,9,342	0/0:13,0:13:12:0,12,261	0/0:20,0:19:18.06:0,18,777	./.	1/1:11,13:24:6.02:155,6,0	1/1:20,0:24:6.02:151,6,0	0/0:21,0:18:24.95:0,25,599	1/1:9,4:13:9.03:272,9,0	./.	1/1:32,0:32:3.01:57,3,0	0/0:15,0:13:15.05:0,15,618	0/0:13,0:12:6.02:0,6,225	0/0:37,0:33:51.18:0,51,2198	./.	1/1:7,6:14:21.07:678,21,0	1/1:11,6:19:18.06:591,18,0	1/1:7,0:4:9.03:299,9,0
chr10	58079713	.	CAGAGAGAGAGAGAGAG	C	144.89	PASS	AC=2;AF=0.038;AN=52;BaseQRankSum=1.884;DP=512;FS=2.578;HRun=0;HaplotypeScore=188.6076;InbreedingCoeff=0.3040;MQ=41.13;MQ0=52;MQRankSum=-2.061;QD=7.24;ReadPosRankSum=0.539;VQSLOD=2.4717;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:24:18.06:0,18,1056	0/0:6,0:4:5.89:0,6,157	./.	./.	0/0:21,0:20:6.02:0,6,358	0/0:13,0:12:6.02:0,6,341	0/0:25,0:20:12.51:0,13,753	0/0:19,0:18:14.96:0,15,333	0/0:26,0:25:28.91:0,29,1234	0/0:16,0:16:21.07:0,21,1099	0/0:19,0:19:3.01:0,3,178	0/0:20,0:19:6.02:0,6,185	0/0:15,0:14:29.31:0,29,1637	0/0:17,0:15:21.07:0,21,1092	0/0:20,0:20:9.03:0,9,583	0/0:28,0:26:19:0,19,1088	0/0:28,0:23:30.10:0,30,1267	1/1:14,5:16:5.67:224,6,0	0/0:21,0:20:22.63:0,23,1165	0/0:14,0:13:3.48:0,3,52	0/0:34,0:28:17.77:0,18,1052	0/0:12,0:11:6.02:0,6,403	0/0:11,0:9:6.02:0,6,246	0/0:35,0:29:36.12:0,36,2175	0/0:10,0:9:3.01:0,3,198	0/0:20,0:20:41.89:0,42,1641	0/0:21,0:21:29.84:0,30,1660	0/0:12,0:5:9:0,9,161
chr10	58080768	.	A	AACAC	4615.82	PASS	AB=0.729;AC=43;AF=0.827;AN=52;BaseQRankSum=0.788;DP=530;FS=3.445;HRun=0;HaplotypeScore=120.4833;InbreedingCoeff=0.1514;MQ=53.43;MQ0=21;MQRankSum=-1.844;QD=10.33;ReadPosRankSum=-2.668;VQSLOD=3.4085;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:22:11.78:369,12,0	1/1:4,0:6:5.75:66,6,0	./.	./.	1/1:4,0:8:6.02:104,6,0	0/1:14,0:20:39.41:39,0,56	0/1:9,0:13:15.96:16,0,39	1/1:24,0:23:10.83:131,11,0	1/1:13,1:23:15.05:250,15,0	1/1:15,0:15:23.77:372,24,0	1/1:8,0:13:2.99:52,3,0	0/1:10,0:17:15.48:15,0,39	0/0:12,0:16:20.87:0,21,306	0/0:6,0:8:6.01:0,6,75	1/1:17,0:24:12.04:207,12,0	1/1:6,7:17:12.03:284,12,0	1/1:15,5:22:5.81:128,6,0	1/1:20,7:29:0.69:466,1,0	1/1:13,0:13:17.24:245,17,0	1/1:11,3:15:8.92:194,9,0	1/1:19,1:19:15.05:325,15,0	0/1:15,0:24:15.96:16,0,39	0/1:11,0:19:27.44:75,0,27	1/1:10,0:22:13.72:61,14,0	1/1:15,1:17:3.01:53,3,0	1/1:25,0:25:36.29:658,36,0	1/1:19,2:28:16.40:242,16,0	1/1:3,3:7:11.95:246,12,0
chr10	58081666	.	A	AT	12243.78	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=12.432;DP=551;FS=0.000;HRun=0;HaplotypeScore=88.9675;InbreedingCoeff=0.9352;MQ=54.32;MQ0=1;MQRankSum=-0.383;QD=38.62;ReadPosRankSum=3.163;VQSLOD=5.0935;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:22:9.55:10,0,694	1/1:0,9:9:27.09:431,27,0	0/0:21,0:15:39.12:0,39,519	0/0:22,0:18:54.17:0,54,740	0/0:24,0:24:66.13:0,66,879	0/0:19,0:19:57.19:0,57,797	0/0:11,0:11:30.10:0,30,419	1/1:2,15:16:48.12:713,48,0	1/1:0,18:18:48.16:767,48,0	1/1:0,22:21:60.20:940,60,0	1/1:0,24:23:54.09:862,54,0	0/0:16,0:16:45.15:0,45,629	0/0:11,0:11:33.11:0,33,461	0/0:9,0:9:27.09:0,27,378	1/1:0,26:26:69.24:1102,69,0	0/0:18,0:18:54.18:0,54,755	1/1:1,24:24:54.18:862,54,0	0/0:41,1:42:75.51:0,76,1628	1/1:1,15:15:45.13:675,45,0	1/1:0,28:28:75.26:1197,75,0	1/1:0,15:15:38.97:623,39,0	0/0:11,0:11:33.11:0,33,460	0/0:13,0:13:36.12:0,36,502	0/0:16,0:16:42.12:0,42,569	1/1:0,19:19:48.16:767,48,0	1/1:0,27:27:78.27:1243,78,0	1/1:2,29:30:81.28:1285,81,0	1/1:0,18:18:48.16:767,48,0
chr10	58082184	.	C	CA	12459.46	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-2.949;DP=421;FS=0.000;HRun=1;HaplotypeScore=70.2243;InbreedingCoeff=0.6644;MQ=41.10;MQ0=16;MQRankSum=-2.983;QD=30.92;ReadPosRankSum=0.854;VQSLOD=4.4546;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,12:9:24.04:327,24,0	1/1:0,5:5:9.03:135,9,0	0/0:10,0:2:6.01:0,6,62	0/0:8,0:1:3.01:0,3,32	1/1:2,33:35:71.90:935,72,0	1/1:0,22:21:45.15:666,45,0	1/1:1,4:5:12.04:179,12,0	1/1:5,9:7:18.06:269,18,0	1/1:1,10:11:18.06:269,18,0	1/1:2,26:27:81.25:1179,81,0	1/1:2,22:24:59.93:762,60,0	1/1:3,12:15:24.05:334,24,0	1/1:0,10:10:24.08:358,24,0	1/1:1,17:16:39.13:576,39,0	1/1:1,13:14:30.10:448,30,0	1/1:2,15:16:42.10:597,42,0	1/1:0,7:5:12.04:174,12,0	1/1:3,12:13:24.05:336,24,0	1/1:2,3:3:9.03:127,9,0	1/1:1,29:30:65.94:935,66,0	1/1:0,1:1:3.01:45,3,0	1/1:2,22:24:57.19:851,57,0	1/1:0,15:15:36.04:503,36,0	1/1:0,9:9:15:198,15,0	1/1:0,10:10:27.09:404,27,0	1/1:7,24:28:72.16:1009,72,0	1/1:1,18:19:45.07:644,45,0	1/1:1,4:5:15.01:200,15,0
chr10	58083820	.	A	AC	1813.33	PASS	AB=0.688;AC=7;AF=0.125;AN=56;BaseQRankSum=8.774;DP=619;FS=0.000;HRun=6;HaplotypeScore=107.9511;InbreedingCoeff=0.8237;MQ=56.36;MQ0=3;MQRankSum=-1.343;QD=19.93;ReadPosRankSum=-1.029;VQSLOD=2.2832;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:56:99:0,147,1498	1/1:0,7:7:21.07:264,21,0	0/0:14,0:10:18.03:0,18,178	0/0:26,0:23:50.70:0,51,504	0/0:22,0:22:57.13:0,57,581	0/0:17,0:17:36.08:0,36,367	0/0:16,0:16:48.11:0,48,489	1/1:8,10:17:27.07:323,27,0	0/0:29,0:29:75.16:0,75,763	0/0:25,0:24:69.15:0,69,703	0/0:12,0:12:30.07:0,30,306	0/0:28,0:28:75.16:0,75,765	0/0:16,0:16:45.10:0,45,459	0/0:18,0:18:54.12:0,54,550	0/0:26,0:26:75.16:0,75,758	0/0:13,0:13:27.06:0,27,275	1/1:8,25:33:75.20:924,75,0	0/1:18,15:33:99:450,0,289	0/0:16,0:15:33.07:0,33,337	0/0:22,0:22:57.13:0,57,580	0/0:48,0:48:99:0,135,1376	0/0:14,0:15:44.13:0,44,434	0/0:17,0:17:48.09:0,48,482	0/0:28,0:28:78.14:0,78,781	0/0:10,0:10:30.07:0,30,306	0/0:25,0:25:63.12:0,63,633	0/0:25,0:24:60.13:0,60,611	0/0:4,0:4:12.03:0,12,122
chr10	58084295	.	C	CAG	18854.49	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=9.752;DP=612;FS=2.631;HRun=0;HaplotypeScore=100.8755;InbreedingCoeff=0.9991;MQ=70.59;MQ0=0;MQRankSum=-3.488;QD=50.68;ReadPosRankSum=0.655;VQSLOD=5.4801;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:76.45:0,76,1113	1/1:0,15:15:45.15:869,45,0	0/0:17,0:17:45.15:0,45,682	0/0:23,0:23:69.23:0,69,1057	0/0:28,0:27:72.23:0,72,1080	0/0:25,0:25:72.23:0,72,1080	0/0:16,0:16:48.13:0,48,678	1/1:4,33:37:99:1870,102,0	1/1:0,19:19:57.20:1101,57,0	1/1:4,26:29:81.28:1524,81,0	1/1:1,21:22:57.20:1098,57,0	0/0:8,0:8:24.08:0,24,367	0/0:16,0:16:48.16:0,48,735	0/0:15,0:15:45.15:0,45,688	1/1:0,23:23:63.22:1217,63,0	1/1:0,15:15:42.14:811,42,0	1/1:0,18:18:54.18:1021,54,0	1/1:5,24:29:69.24:1314,69,0	1/1:5,15:18:45.12:823,45,0	1/1:2,35:38:99:2022,105,0	1/1:0,15:15:30.10:579,30,0	0/0:28,0:28:81.23:0,81,1176	0/0:26,0:26:78.22:0,78,1129	0/0:9,0:9:21.05:0,21,299	1/1:0,20:20:54.19:1041,54,0	1/1:0,21:21:63.22:1202,63,0	1/1:2,28:30:75.26:1438,75,0	1/1:0,17:20:48.16:925,48,0
chr10	58084636	.	C	CAGA	7902.78	PASS	AB=0.915;AC=33;AF=0.589;AN=56;BaseQRankSum=15.124;DP=588;FS=16.230;HRun=0;HaplotypeScore=288.6340;InbreedingCoeff=0.7848;MQ=50.30;MQ0=3;MQRankSum=-12.460;QD=18.91;ReadPosRankSum=-1.567;VQSLOD=2.9159;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:9,0:10:30.82:31,0,110	1/1:15,0:15:35.88:211,36,0	0/0:29,0:21:53.25:0,53,601	0/0:16,0:15:38.51:0,39,363	0/1:29,0:34:99:143,0,246	0/0:22,0:22:66.17:0,66,1058	0/0:9,0:9:27.05:0,27,390	1/1:47,0:38:72.53:578,73,0	1/1:25,2:27:62.06:528,62,0	1/1:28,5:33:65.07:822,65,0	1/1:18,0:17:45.67:310,46,0	0/0:14,0:15:45.04:0,45,597	0/0:10,0:10:30.02:0,30,385	0/0:12,0:12:36.06:0,36,516	1/1:21,7:28:73.82:777,74,0	1/1:16,2:18:47.53:526,48,0	0/1:9,0:10:6.67:120,0,7	1/1:17,0:17:20.63:251,21,0	1/1:23,0:22:52.05:453,52,0	1/1:38,5:43:97.42:974,97,0	1/1:9,0:9:16.98:104,17,0	0/0:13,0:13:36.03:0,36,463	0/0:32,0:32:96.14:0,96,1345	0/0:12,0:12:13.92:0,14,384	1/1:18,0:17:46.92:366,47,0	1/1:25,2:27:69.60:572,70,0	1/1:27,6:33:95.35:1021,95,0	1/1:6,0:6:17.69:115,18,0
chr10	58084641	.	C	CAAG	2046.03	PASS	AB=0.927;AC=12;AF=0.214;AN=56;BaseQRankSum=10.867;DP=665;FS=82.662;HRun=0;HaplotypeScore=223.8719;InbreedingCoeff=-0.2813;MQ=47.60;MQ0=5;MQRankSum=-9.977;QD=5.97;ReadPosRankSum=-0.814;VQSLOD=-0.2333;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:10,0:10:33.39:33,0,77	0/0:17,0:17:36.35:0,36,296	0/0:33,0:21:56.61:0,57,603	0/0:18,0:15:35.57:0,36,344	0/0:36,0:34:26.23:0,26,422	0/0:22,0:22:63.18:0,63,1015	0/0:10,0:10:27.05:0,27,381	0/0:53,0:44:78.82:0,79,650	0/1:29,0:29:99:140,0,165	0/1:36,0:36:92.53:398,0,93	0/1:20,13:32:99:111,0,153	0/0:14,0:14:42.07:0,42,561	0/0:9,0:9:27:0,27,346	0/0:14,0:14:22.68:0,23,487	0/1:33,0:33:99:225,0,164	0/1:21,0:21:99:121,0,129	0/0:10,0:10:25.88:0,26,172	0/0:18,0:18:19.17:0,19,216	0/1:38,0:34:99:213,0,181	0/1:42,0:42:99:359,0,157	0/0:9,0:9:3.86:0,4,79	0/0:14,0:14:39.02:0,39,477	0/0:34,0:34:93.11:0,93,1280	0/0:11,0:11:24.06:0,24,374	0/1:19,0:18:99:105,0,103	0/1:28,0:28:99:156,0,270	0/1:34,9:43:99:156,0,287	0/1:3,5:10:23.47:179,0,23
chr10	58084671	.	CTGG	C	1152.30	PASS	AB=0.821;AC=11;AF=0.196;AN=56;BaseQRankSum=14.075;DP=597;FS=10.517;HRun=0;HaplotypeScore=169.1172;InbreedingCoeff=-0.2336;MQ=63.66;MQ0=3;MQRankSum=-10.248;QD=4.52;ReadPosRankSum=8.194;VQSLOD=0.9704;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:8:24.08:0,24,466	0/1:10,2:12:75.48:75,0,570	0/0:32,0:24:72.23:0,72,1649	0/0:26,0:22:36.32:0,36,923	0/0:31,0:30:75.29:0,75,1714	0/0:28,0:28:84.29:0,84,2049	0/0:13,0:13:39.13:0,39,939	0/0:31,0:31:74.54:0,75,1700	0/1:18,7:25:82.12:82,0,822	0/1:31,5:36:99:191,0,1625	0/1:24,2:26:52.17:52,0,590	0/0:12,0:12:36.12:0,36,845	0/0:9,0:9:27.09:0,27,636	0/0:16,0:16:48.16:0,48,1158	0/1:20,7:28:99:236,0,563	0/1:14,4:18:92.90:93,0,555	0/1:6,2:9:1.04:1,0,278	0/0:24,1:25:64.35:0,64,1365	0/0:21,1:20:40.89:0,41,1256	0/1:34,4:38:99:191,0,1832	0/1:4,4:8:69.11:69,0,152	0/0:14,0:14:39.13:0,39,939	0/0:32,0:32:96.33:0,96,2299	0/0:12,0:12:36.08:0,36,790	0/1:15,3:18:39.41:39,0,840	0/0:22,1:23:16.43:0,16,1174	0/1:24,13:37:99:266,0,533	0/0:8,0:8:17.91:0,18,400
chr10	58084688	.	A	AC	663.11	PASS	AB=0.766;AC=8;AF=0.143;AN=56;BaseQRankSum=13.527;DP=621;FS=45.260;HRun=0;HaplotypeScore=158.6079;InbreedingCoeff=-0.1610;MQ=73.58;MQ0=0;MQRankSum=-9.999;QD=2.96;ReadPosRankSum=4.478;VQSLOD=1.1069;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:27.13:0,27,333	0/0:13,0:13:12.19:0,12,433	0/0:26,0:25:69.13:0,69,897	0/0:28,0:26:60.03:0,60,718	0/0:30,0:30:87.17:0,87,1123	0/0:26,0:26:78.24:0,78,1058	0/0:14,0:14:42.14:0,42,587	0/0:28,0:28:84.19:0,84,1089	0/1:16,9:25:40.35:40,0,448	0/1:25,9:34:99:222,0,809	0/0:29,2:31:16.80:0,17,624	0/0:12,0:12:36.11:0,36,488	0/0:8,0:8:21.07:0,21,294	0/0:18,0:18:54.17:0,54,740	0/1:17,13:30:99:170,0,516	0/1:12,6:18:32.87:33,0,382	0/0:13,1:14:7.43:0,7,411	0/0:30,0:30:78.22:0,78,1066	0/0:18,1:19:44.79:0,45,720	0/1:35,7:42:79.48:79,0,1131	0/1:6,4:10:0.70:1,0,225	0/0:16,0:16:45.15:0,45,629	0/0:31,0:31:93.29:0,93,1268	0/0:11,0:11:33.11:0,33,461	0/0:19,2:21:32.53:0,33,691	0/1:21,3:24:14.91:15,0,770	0/1:23,18:41:99:232,0,565	0/0:8,0:8:18.06:0,18,252
chr10	58084692	.	A	AAC	1385.22	PASS	AB=0.771;AC=8;AF=0.143;AN=56;BaseQRankSum=14.355;DP=629;FS=18.416;HRun=0;HaplotypeScore=169.1477;InbreedingCoeff=-0.1685;MQ=73.74;MQ0=0;MQRankSum=-11.150;QD=6.00;ReadPosRankSum=3.507;VQSLOD=2.1157;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:25.53:0,26,329	0/0:13,0:13:7.78:0,8,346	0/0:23,0:23:53.78:0,54,795	0/0:30,0:28:69.19:0,69,956	0/0:31,0:31:78.25:0,78,1193	0/0:24,0:24:72.24:0,72,1103	0/0:16,0:16:48.16:0,48,733	0/0:28,0:28:78.26:0,78,1192	0/1:17,9:26:99:131,0,535	0/1:24,9:33:99:306,0,914	0/0:28,2:30:19.92:0,20,699	0/0:13,0:13:39.13:0,39,595	0/0:8,0:8:24.08:0,24,368	0/0:17,0:17:51.17:0,51,779	0/1:17,13:30:99:320,0,562	0/1:13,6:19:99:101,0,386	0/0:12,1:13:31.44:0,31,502	0/0:32,0:32:84.26:0,84,1243	0/0:18,1:19:22.67:0,23,650	0/1:36,7:43:99:181,0,1302	0/1:6,4:10:8.06:8,0,249	0/0:16,0:16:45.13:0,45,650	0/0:29,0:29:84.29:0,84,1286	0/0:12,0:12:34.92:0,35,489	0/0:19,2:21:15.60:0,16,779	0/1:22,3:25:48.45:48,0,849	0/1:27,18:45:99:424,0,703	0/0:10,0:10:18.06:0,18,276
chr10	58084885	.	C	CT	6071.08	PASS	AC=30;AF=0.556;AN=54;BaseQRankSum=15.287;DP=396;FS=22.103;HRun=1;HaplotypeScore=113.5970;InbreedingCoeff=0.9478;MQ=79.59;MQ0=0;MQRankSum=-15.286;QD=34.89;ReadPosRankSum=-0.233;VQSLOD=2.9204;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:60.19:0,60,779	1/1:0,4:4:12.04:179,12,0	0/0:20,0:20:60.16:0,60,747	0/0:11,0:11:26.57:0,27,319	0/0:34,0:34:99:0,102,1309	0/0:18,0:17:51.16:0,51,652	0/0:18,0:18:54.16:0,54,686	1/1:6,12:18:48.12:688,48,0	1/1:1,13:14:33.11:494,33,0	1/1:1,7:8:21.07:314,21,0	1/1:1,17:18:42.10:603,42,0	0/0:8,0:8:21.05:0,21,259	0/0:16,0:16:48.16:0,48,623	0/0:18,0:18:54.18:0,54,701	1/1:0,8:8:15.05:223,15,0	1/1:0,9:9:24.08:358,24,0	1/1:0,4:4:3.01:45,3,0	1/1:1,7:8:14.69:264,15,0	1/1:2,11:11:30.10:449,30,0	1/1:3,23:26:60.03:798,60,0	./.	0/0:15,0:15:42.14:0,42,545	0/0:29,0:29:87.25:0,87,1100	0/0:10,0:10:24.08:0,24,312	1/1:0,8:8:18.06:269,18,0	1/1:1,14:15:39.13:583,39,0	1/1:2,17:19:51.14:739,51,0	1/1:1,1:2:5.99:66,6,0
chr10	58084916	.	G	GA	4378.59	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=14.161;DP=399;FS=6.096;HRun=5;HaplotypeScore=135.1051;InbreedingCoeff=0.9097;MQ=67.89;MQ0=0;MQRankSum=-14.042;QD=25.91;ReadPosRankSum=0.870;VQSLOD=3.0967;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:87.16:0,87,908	1/1:0,4:4:12.04:158,12,0	0/0:21,0:21:56.25:0,56,610	0/0:15,0:15:33.02:0,33,327	0/0:32,0:32:84.21:0,84,902	0/0:30,0:29:87.19:0,87,919	0/0:12,0:12:27.07:0,27,290	1/1:3,13:16:33.11:434,33,0	1/1:5,10:15:18.06:231,18,0	1/1:2,7:9:21.07:273,21,0	1/1:3,13:16:36.07:454,36,0	0/0:11,0:11:33.08:0,33,354	0/0:16,0:16:48.12:0,48,516	0/0:13,0:13:39.08:0,39,411	1/1:0,10:10:18.06:237,18,0	1/1:1,10:11:24.08:315,24,0	1/1:0,4:4:2.98:21,3,0	1/1:1,8:9:20.86:250,21,0	1/1:5,3:7:5.85:54,6,0	1/1:2,20:22:48.16:631,48,0	1/1:0,1:1:3.01:39,3,0	0/0:15,0:15:45.11:0,45,484	0/0:29,0:29:84.17:0,84,883	0/0:5,0:5:15.04:0,15,161	1/1:0,6:6:15.01:178,15,0	1/1:2,11:13:24.08:315,24,0	1/1:0,22:22:53.93:710,54,0	1/1:1,2:3:6.02:79,6,0
chr10	58084929	.	T	TA	3810.35	PASS	AB=0.600;AC=31;AF=0.554;AN=56;BaseQRankSum=13.187;DP=380;FS=10.615;HRun=4;HaplotypeScore=119.0679;InbreedingCoeff=0.8627;MQ=67.27;MQ0=0;MQRankSum=-13.035;QD=27.61;ReadPosRankSum=1.870;VQSLOD=2.1507;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:93.26:0,93,1049	1/1:1,3:4:9.03:120,9,0	0/0:17,0:17:37.23:0,37,499	0/0:17,0:17:38.47:0,38,415	0/0:38,0:38:96.24:0,96,1065	0/0:32,0:31:90.26:0,90,1020	0/0:14,0:14:33.09:0,33,374	1/1:2,9:11:21.07:287,21,0	1/1:0,11:11:21.07:276,21,0	1/1:2,5:7:15.05:199,15,0	1/1:1,11:12:27.09:364,27,0	0/0:9,0:9:27.08:0,27,306	0/0:14,0:14:42.12:0,42,476	0/0:16,0:16:45.13:0,45,510	1/1:0,9:9:15.05:202,15,0	1/1:1,9:10:21.07:283,21,0	1/1:1,2:3:3.01:40,3,0	1/1:0,9:9:21.07:286,21,0	1/1:1,3:4:3.01:41,3,0	1/1:2,17:19:42.14:565,42,0	1/1:0,1:1:3.01:41,3,0	0/0:15,0:15:39.10:0,39,432	0/0:32,0:32:93.25:0,93,1041	0/0:6,0:6:18.05:0,18,203	1/1:0,5:5:12.04:161,12,0	1/1:2,8:10:18.06:244,18,0	1/1:4,16:20:48.15:630,48,0	0/1:1,2:3:2.01:72,0,2
chr10	58084937	.	A	AATATTT	3610.37	PASS	AB=0.611;AC=22;AF=0.458;AN=48;BaseQRankSum=9.922;DP=294;FS=3.084;HRun=0;HaplotypeScore=107.0317;InbreedingCoeff=0.7183;MQ=72.30;MQ0=0;MQRankSum=-9.304;QD=66.86;ReadPosRankSum=5.289;VQSLOD=4.3334;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:91.86:0,92,2297	1/1:0,2:2:6.02:187,6,0	0/0:17,0:17:46.80:0,47,1064	0/0:19,0:19:53.68:0,54,1196	0/0:35,0:35:99:0,102,2521	0/0:33,0:32:99:0,99,2504	0/0:13,0:13:36.12:0,36,918	./.	1/1:0,6:6:9.03:280,9,0	1/1:0,5:5:15.05:472,15,0	1/1:0,3:3:9.03:277,9,0	0/0:10,0:10:30.10:0,30,769	0/0:16,0:16:48.16:0,48,1230	0/0:14,0:14:42.14:0,42,1044	1/1:0,5:5:6.02:186,6,0	1/1:0,4:4:9.03:280,9,0	1/1:0,1:1:3.01:95,3,0	./.	./.	1/1:0,8:8:18.06:561,18,0	./.	0/0:13,0:13:39.13:0,39,999	0/0:29,0:29:87.30:0,87,2200	0/0:8,0:8:21.07:0,21,520	1/1:0,3:3:6.02:186,6,0	0/1:1,4:5:67.74:180,0,68	1/1:1,9:10:27.09:819,27,0	0/1:0,1:2:21.67:87,0,22
chr10	58084938	.	G	GTAAACCAGA	8526.56	PASS	AB=0.710;AC=25;AF=0.481;AN=52;BaseQRankSum=12.856;DP=354;FS=13.178;HRun=0;HaplotypeScore=150.7196;InbreedingCoeff=0.7159;MQ=67.11;MQ0=0;MQRankSum=-12.034;QD=77.51;ReadPosRankSum=1.795;VQSLOD=4.6311;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:77.68:0,78,2735	1/1:6,2:8:15.05:567,15,0	0/0:16,0:17:44.82:0,45,1231	0/0:19,0:19:35.57:0,36,1308	0/0:34,0:34:99:0,99,3039	0/0:33,0:32:99:0,99,2959	0/0:14,0:14:39.11:0,39,1139	1/1:4,0:4:6.02:155,6,0	1/1:3,6:9:15.05:539,15,0	1/1:10,5:15:33.11:1339,33,0	1/1:4,3:7:18.06:655,18,0	0/0:11,0:11:30.10:0,30,908	0/0:17,0:17:48.16:0,48,1516	0/0:14,0:14:42.14:0,42,1155	1/1:2,5:7:12.04:401,12,0	1/1:4,4:8:18.06:699,18,0	1/1:2,1:3:9.03:326,9,0	./.	1/1:5,0:4:5.90:205,6,0	1/1:2,8:10:18.06:779,18,0	./.	0/0:13,0:13:39.13:0,39,1231	0/0:29,0:29:87.28:0,87,2655	0/0:8,0:8:24.06:0,24,600	0/1:3,3:6:26.77:321,0,27	0/1:6,4:10:68.03:667,0,68	1/1:5,9:15:42.14:1716,42,0	0/1:2,1:3:21.54:158,0,22
chr10	58084982	.	CT	C	4311.52	PASS	AB=0.520;AC=31;AF=0.554;AN=56;BaseQRankSum=15.234;DP=416;FS=6.631;HRun=3;HaplotypeScore=94.9969;InbreedingCoeff=0.8675;MQ=60.49;MQ0=0;MQRankSum=-14.125;QD=28.18;ReadPosRankSum=0.726;VQSLOD=3.7582;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,3:40:3.77:0,4,1342	1/1:0,6:6:18.06:223,18,0	0/0:28,1:28:44.06:0,44,1068	0/0:17,0:17:39.09:0,39,538	0/0:30,0:30:84.28:0,84,1209	0/0:29,0:29:84.27:0,84,1191	0/0:15,1:16:11.04:0,11,611	1/1:1,13:14:30.08:359,30,0	1/1:0,8:8:21.07:260,21,0	1/1:0,16:15:42.09:503,42,0	1/1:0,11:11:15.05:186,15,0	0/0:11,0:11:33.11:0,33,475	0/0:17,0:17:51.17:0,51,734	0/0:16,0:16:48.16:0,48,691	1/1:2,8:10:21.07:260,21,0	1/1:0,12:12:33.10:404,33,0	1/1:0,5:5:9.03:111,9,0	1/1:1,7:8:12.04:149,12,0	1/1:0,6:6:15.05:186,15,0	1/1:3,8:11:18.05:223,18,0	1/1:0,2:2:3.01:37,3,0	0/0:13,0:13:39.10:0,39,524	0/0:32,0:32:90.30:0,90,1294	0/0:13,0:13:39.13:0,39,559	1/1:0,14:14:36.11:445,36,0	0/1:1,12:13:7.11:372,0,7	1/1:0,11:11:30.09:371,30,0	1/1:0,6:6:18.06:223,18,0
chr10	58085398	.	CTCAAAAGT	C	6172.85	PASS	AC=28;AF=0.538;AN=52;BaseQRankSum=12.218;DP=307;FS=58.616;HRun=0;HaplotypeScore=98.7608;InbreedingCoeff=0.9316;MQ=64.88;MQ0=0;MQRankSum=-11.352;QD=58.23;ReadPosRankSum=0.453;VQSLOD=2.6160;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:66.20:0,66,2790	./.	0/0:9,0:9:27.05:0,27,784	0/0:8,0:8:18.95:0,19,797	0/0:19,0:19:57.18:0,57,2299	0/0:23,0:23:69.24:0,69,3052	0/0:9,0:9:27.09:0,27,1076	1/1:3,9:12:24.06:567,24,0	1/1:1,10:11:18.06:516,18,0	1/1:1,10:11:27.09:769,27,0	1/1:1,13:14:30.10:803,30,0	0/0:21,0:21:60.21:0,60,2684	0/0:19,0:19:57.20:0,57,2469	0/0:12,0:12:36.12:0,36,1609	1/1:1,4:5:12.04:248,12,0	1/1:3,7:10:18.06:516,18,0	1/1:0,2:2:6.02:172,6,0	1/1:1,3:4:6.02:172,6,0	1/1:0,4:4:12.04:344,12,0	1/1:0,9:9:12.04:344,12,0	./.	0/0:14,0:14:36.11:0,36,1500	0/0:31,0:31:90.31:0,90,4025	0/0:9,0:9:27.09:0,27,1208	1/1:1,5:6:9.03:258,9,0	1/1:0,5:5:15.05:430,15,0	1/1:1,9:10:27.09:774,27,0	1/1:0,3:3:9.03:258,9,0
chr10	58085539	.	AG	A	1769.80	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=11.049;DP=327;FS=15.958;HRun=1;HaplotypeScore=64.4910;InbreedingCoeff=0.8693;MQ=77.24;MQ0=2;MQRankSum=-10.581;QD=19.03;ReadPosRankSum=-4.689;VQSLOD=1.7166;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:57.12:0,57,841	1/1:1,3:4:9:80,9,0	0/0:27,2:28:9.46:0,9,737	0/0:23,1:20:19.19:0,19,558	0/0:34,0:34:96.33:0,96,1495	0/0:15,0:15:45.14:0,45,681	0/0:15,0:15:42.08:0,42,566	1/1:2,4:6:14.92:116,15,0	1/1:4,0:4:5.94:41,6,0	1/1:0,8:8:24.01:235,24,0	1/1:0,8:8:21.01:196,21,0	0/0:18,0:18:54.18:0,54,843	0/0:19,0:19:57.19:0,57,892	0/0:11,0:11:33.03:0,33,463	1/1:4,0:4:5.95:42,6,0	1/1:0,3:3:2.98:21,3,0	1/1:0,2:1:3:26,3,0	1/1:0,4:3:9.02:99,9,0	1/1:0,5:5:12.01:133,12,0	1/1:8,8:16:41.83:383,42,0	1/1:2,1:3:8.93:65,9,0	0/0:12,0:12:30.10:0,30,461	0/0:19,0:19:50.85:0,51,740	0/0:14,0:14:39.13:0,39,607	1/1:2,10:12:26.99:235,27,0	1/1:5,1:6:17.88:132,18,0	1/1:2,1:3:8.97:78,9,0	1/1:2,3:5:12:105,12,0
chr10	58085544	.	A	ACC	1518.93	PASS	AC=26;AF=0.520;AN=50;BaseQRankSum=9.639;DP=298;FS=42.082;HRun=3;HaplotypeScore=72.0258;InbreedingCoeff=0.8378;MQ=82.83;MQ0=2;MQRankSum=-9.488;QD=24.11;ReadPosRankSum=-1.064;VQSLOD=-0.1581;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:51.17:0,51,707	1/1:1,3:4:9.03:118,9,0	0/0:32,0:30:63.07:0,63,778	0/0:27,0:23:31.28:0,31,595	0/0:33,0:33:93.26:0,93,1261	0/0:14,0:14:42.14:0,42,588	0/0:11,0:11:33.11:0,33,457	1/1:1,3:4:6.02:80,6,0	./.	1/1:3,3:6:12.03:146,12,0	1/1:0,8:8:21.02:240,21,0	0/0:18,0:18:51.17:0,51,713	0/0:22,0:22:60.18:0,60,821	0/0:9,0:9:24.08:0,24,333	./.	./.	1/1:0,2:1:3.01:39,3,0	1/1:0,4:3:9.03:127,9,0	1/1:3,1:4:3.01:44,3,0	1/1:4,4:10:18.06:232,18,0	1/1:1,1:2:6.02:75,6,0	0/0:14,0:14:30.07:0,30,400	0/0:18,0:18:42.14:0,42,588	0/0:13,0:13:39.13:0,39,540	1/1:2,10:12:30.10:401,30,0	1/1:2,0:2:5.98:60,6,0	1/1:0,1:1:3.01:33,3,0	1/1:0,3:4:9.03:120,9,0
chr10	58085551	.	C	CA	912.76	PASS	AB=1.000;AC=18;AF=0.375;AN=48;BaseQRankSum=7.862;DP=284;FS=75.668;HRun=2;HaplotypeScore=69.9150;InbreedingCoeff=0.6689;MQ=85.69;MQ0=0;MQRankSum=-7.952;QD=19.42;ReadPosRankSum=0.078;VQSLOD=-0.2442;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:48.06:0,48,570	0/1:4,0:4:10.43:10,0,16	0/0:33,0:31:71.12:0,71,723	0/0:24,0:22:18.26:0,18,453	0/0:30,0:30:84.07:0,84,983	0/0:16,0:16:48.10:0,48,544	0/0:11,0:11:30.07:0,30,345	0/0:4,0:4:6.60:0,7,24	./.	1/1:0,4:4:12.04:166,12,0	1/1:3,4:7:9.03:119,9,0	0/0:19,0:19:54.16:0,54,657	0/0:21,0:21:63.18:0,63,757	0/0:8,0:8:21.07:0,21,260	./.	./.	0/0:1,0:1:2.68:0,3,11	1/1:2,1:3:3.48:44,3,0	1/1:2,1:3:3.01:43,3,0	1/1:1,5:6:18.04:238,18,0	1/1:1,2:3:2.96:43,3,0	0/0:13,0:13:30.09:0,30,371	0/0:21,0:21:47.71:0,48,542	0/0:15,0:15:45.10:0,45,536	1/1:2,10:12:27.05:363,27,0	1/1:0,1:1:3.01:43,3,0	./.	0/1:4,0:4:4.95:13,0,5
chr10	58085607	.	A	AAAGCAACAGCAACAAC	6434.90	PASS	AC=28;AF=0.538;AN=52;BaseQRankSum=7.330;DP=306;FS=126.170;HRun=0;HaplotypeScore=151.2175;InbreedingCoeff=0.8422;MQ=91.58;MQ0=2;MQRankSum=-9.424;QD=99.00;ReadPosRankSum=-2.660;VQSLOD=1.7852;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:16:14.08:0,14,460	1/1:2,0:3:6.02:256,6,0	0/0:29,0:27:78.16:0,78,2889	0/0:27,0:26:56.21:0,56,2211	0/0:25,0:25:30.10:0,30,1209	0/0:14,0:14:32.66:0,33,1357	0/0:13,0:13:27.09:0,27,1218	1/1:14,0:13:39.12:1495,39,0	1/1:2,2:4:12.04:616,12,0	1/1:1,0:1:3.01:203,3,0	./.	0/0:15,0:15:42.14:0,42,1775	0/0:24,0:24:63.21:0,63,2681	0/0:15,0:15:42.14:0,42,1732	1/1:4,1:5:15.05:787,15,0	1/1:2,1:3:9.03:381,9,0	./.	1/1:3,0:3:9.03:372,9,0	1/1:3,0:3:9.03:269,9,0	1/1:10,2:12:17.93:732,18,0	1/1:1,0:1:3.01:119,3,0	0/0:14,0:14:27.56:0,28,1265	0/0:22,0:22:57.15:0,57,2129	0/0:23,0:23:63.22:0,63,2762	1/1:6,0:6:9.03:248,9,0	1/1:5,0:5:12.04:516,12,0	1/1:2,0:2:6.02:320,6,0	1/1:3,0:2:3.01:120,3,0
chr10	58085609	.	A	AG	1111.03	PASS	AB=0.667;AC=27;AF=0.519;AN=52;BaseQRankSum=8.952;DP=311;FS=103.584;HRun=0;HaplotypeScore=87.1222;InbreedingCoeff=0.7092;MQ=90.92;MQ0=4;MQRankSum=-8.696;QD=19.16;ReadPosRankSum=0.008;VQSLOD=-0.1649;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:26:14.07:0,14,156	1/1:1,2:3:6.02:91,6,0	0/0:28,0:26:78.25:0,78,1074	0/0:30,0:26:72.65:0,73,878	0/0:24,0:24:30.10:0,30,407	0/0:14,0:14:33.11:0,33,460	0/0:14,0:14:32.25:0,32,421	1/1:4,6:9:21.87:293,22,0	1/1:2,2:4:12.01:150,12,0	1/1:1,0:1:1.55:4,2,0	./.	0/0:15,0:15:45.12:0,45,592	0/0:24,0:24:63.18:0,63,862	0/0:15,0:15:42.14:0,42,587	1/1:3,2:5:15.04:211,15,0	1/1:2,1:3:1.63:72,2,0	./.	1/1:0,1:1:3.01:47,3,0	1/1:1,1:2:1.78:22,2,0	1/1:11,2:13:4.36:98,4,0	1/1:1,1:1:3.01:47,3,0	0/0:15,0:15:27.07:0,27,375	0/0:22,0:22:60.13:0,60,764	0/0:24,0:24:62.91:0,63,866	1/1:0,2:2:3.01:47,3,0	1/1:4,1:5:9.81:76,10,0	0/1:2,2:4:1.60:86,0,2	1/1:1,2:2:3.01:47,3,0
chr10	58085628	.	CATCATCATCATCATCATCAA	C	1164.98	PASS	AB=1.000;AC=10;AF=0.227;AN=44;BaseQRankSum=5.467;DP=327;FS=7.042;HRun=0;HaplotypeScore=164.7649;InbreedingCoeff=0.1606;MQ=52.81;MQ0=15;MQRankSum=-5.265;QD=13.24;ReadPosRankSum=-0.047;VQSLOD=2.1854;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:1,25:26:12.04:577,12,0	0/0:2,0:2:3.01:0,3,49	0/0:22,0:10:30.10:0,30,1011	0/0:29,0:14:39.08:0,39,1278	1/1:2,21:22:9.03:435,9,0	0/0:14,0:14:32.79:0,33,2194	0/0:17,0:17:48.16:0,48,3021	0/0:8,0:7:17.72:0,18,375	0/0:5,0:5:8.96:0,9,165	0/1:2,0:2:16.76:17,0,97	./.	0/0:13,0:13:39.12:0,39,2533	0/0:28,0:28:72.20:0,72,5175	0/0:16,0:16:42.09:0,42,3060	0/0:6,0:6:15.05:0,15,334	0/1:4,0:4:75.89:76,0,98	./.	./.	0/1:7,0:5:25.48:25,0,293	0/1:13,0:13:35.95:36,0,212	./.	0/0:16,0:16:33.54:0,34,1868	0/0:23,0:23:63.22:0,63,4023	0/0:26,0:26:72.20:0,72,4750	./.	0/1:7,0:7:14.48:14,0,334	0/1:6,0:6:87.02:124,0,87	./.
chr10	58085666	.	CAAT	C	587.31	PASS	AB=1.000;AC=19;AF=0.452;AN=42;BaseQRankSum=8.065;DP=299;FS=7.817;HRun=0;HaplotypeScore=77.5983;InbreedingCoeff=0.6186;MQ=53.50;MQ0=5;MQRankSum=-7.085;QD=7.16;ReadPosRankSum=-0.082;VQSLOD=1.6210;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:27:5.45:108,0,5	./.	0/0:21,0:11:29.58:0,30,411	0/0:31,0:15:35.70:0,36,450	0/1:24,0:24:31.41:80,0,31	0/0:17,0:17:45.06:0,45,871	0/0:18,0:18:51.10:0,51,921	./.	1/1:1,2:3:6.02:71,6,0	1/1:1,0:1:3:29,3,0	1/1:5,0:5:0.47:1,0,0	0/0:11,0:11:33.07:0,33,625	0/0:29,0:29:72.08:0,72,1307	0/0:22,0:22:54.12:0,54,1014	1/1:1,2:3:6.02:75,6,0	1/1:2,1:3:9.03:103,9,0	./.	./.	0/1:1,0:1:0:0,0,0	1/1:7,0:7:3.01:35,3,0	./.	0/0:10,0:10:24.07:0,24,503	0/0:29,0:29:77.63:0,78,1488	0/0:26,0:26:75.13:0,75,1405	./.	1/1:1,1:2:6.02:69,6,0	1/1:4,2:6:15.04:168,15,0	./.
chr10	58093467	.	CG	C	1138.65	PASS	AB=1.000;AC=21;AF=0.875;AN=24;BaseQRankSum=-2.639;DP=196;FS=7.428;HRun=1;HaplotypeScore=30.8557;InbreedingCoeff=0.2545;MQ=69.45;MQ0=43;MQRankSum=-1.213;QD=11.05;ReadPosRankSum=3.765;VQSLOD=1.5912;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	1/1:0,2:2:6.02:84,6,0	0/1:56,0:14:46.90:47,0,275	0/0:59,0:6:12:0,12,146	1/1:0,2:2:3.01:42,3,0	1/1:1,1:2:3.01:42,3,0	./.	./.	./.	1/1:3,8:7:21.07:293,21,0	1/1:1,8:8:11.96:167,12,0	./.	./.	./.	./.	./.	./.	./.	./.	1/1:1,6:5:15.05:209,15,0	./.	1/1:0,2:2:6.02:84,6,0	1/1:0,3:3:6.02:84,6,0	./.	1/1:0,7:6:11.97:143,12,0	./.	./.	1/1:0,2:2:3.01:42,3,0
chr10	58093912	.	T	TTAA	862.42	PASS	AB=1.000;AC=15;AF=0.417;AN=36;BaseQRankSum=0.138;DP=109;FS=1.184;HRun=0;HaplotypeScore=25.3029;InbreedingCoeff=0.6214;MQ=52.41;MQ0=27;MQRankSum=-0.952;QD=26.13;ReadPosRankSum=1.592;VQSLOD=3.2934;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,0:4:12.04:163,12,0	./.	0/0:4,0:3:9.03:0,9,142	0/1:2,0:2:5.10:5,0,10	./.	0/0:6,0:4:9.03:0,9,160	0/0:6,0:4:8.95:0,9,109	1/1:5,2:4:6.02:99,6,0	1/1:0,0:1:3.01:40,3,0	./.	./.	0/0:4,0:4:9:0,9,161	0/0:5,0:5:2.75:0,3,53	0/0:7,0:5:5.95:0,6,71	./.	./.	0/0:1,0:1:3.01:0,3,34	1/1:1,3:3:9.03:219,9,0	1/1:2,1:1:3.01:73,3,0	./.	1/1:0,4:4:12.04:293,12,0	0/0:14,0:13:27.06:0,27,442	0/0:11,0:11:21.07:0,21,381	0/0:7,0:7:12.04:0,12,221	./.	./.	./.	1/1:2,0:3:9.03:110,9,0
chr10	58094852	.	T	TC	5340.91	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=13.434;DP=339;FS=7.138;HRun=3;HaplotypeScore=69.0172;InbreedingCoeff=0.9703;MQ=68.74;MQ0=0;MQRankSum=-12.180;QD=32.17;ReadPosRankSum=-1.084;VQSLOD=4.5496;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:57.97:0,58,662	1/1:0,6:6:17.99:220,18,0	0/0:14,0:14:18.75:0,19,396	0/0:8,0:6:18.06:0,18,216	0/0:22,0:22:60.18:0,60,720	0/0:17,0:17:42.13:0,42,504	0/0:12,0:12:36.09:0,36,411	1/1:5,10:14:33.11:457,33,0	1/1:1,5:6:15.05:209,15,0	1/1:0,14:14:42.14:583,42,0	1/1:2,9:11:24.08:335,24,0	0/0:10,0:10:30.09:0,30,360	0/0:17,0:17:48.15:0,48,575	0/0:15,0:15:45.14:0,45,540	1/1:1,10:10:27.09:377,27,0	1/1:3,9:12:18.06:251,18,0	1/1:1,13:14:39.13:533,39,0	1/1:0,13:13:30.10:419,30,0	1/1:3,11:14:32.70:456,33,0	1/1:1,5:6:11.97:144,12,0	1/1:2,5:7:15.05:209,15,0	0/0:10,0:10:30.09:0,30,359	0/0:13,0:13:36.11:0,36,431	0/0:13,0:13:33.10:0,33,395	1/1:3,8:11:18.06:243,18,0	1/1:1,10:11:27.09:371,27,0	1/1:1,11:12:33.11:451,33,0	1/1:1,2:3:6.02:84,6,0
chr10	58094977	.	CACCA	C	3124.01	PASS	AB=0.611;AC=19;AF=0.352;AN=54;BaseQRankSum=13.224;DP=363;FS=21.828;HRun=0;HaplotypeScore=107.9408;InbreedingCoeff=0.2507;MQ=85.56;MQ0=0;MQRankSum=-11.760;QD=22.47;ReadPosRankSum=2.314;VQSLOD=1.7736;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:51.18:0,51,1477	0/0:1,0:1:2.99:0,3,23	0/0:19,0:19:57.19:0,57,1567	0/0:14,0:14:38.70:0,39,1037	0/0:34,0:34:99:0,102,2929	0/0:27,0:27:81.28:0,81,2346	0/0:10,0:10:30.09:0,30,787	0/1:6,6:12:22.18:229,0,22	0/1:3,5:8:61.31:131,0,61	1/1:4,5:9:4.92:219,5,0	1/1:2,0:2:3.01:38,3,0	0/0:11,0:11:33.11:0,33,918	0/0:16,0:16:48.16:0,48,1365	0/0:20,0:20:60.21:0,60,1738	0/1:1,10:11:23.09:329,0,23	0/1:3,14:17:36.63:444,0,37	1/1:2,7:9:6.47:213,6,0	0/1:6,6:12:32.48:164,0,32	0/1:8,5:13:61.30:242,0,61	./.	0/1:1,7:8:30.49:30,0,48	0/0:22,0:22:66.23:0,66,1896	0/0:21,0:21:60.21:0,60,1721	0/0:9,0:9:27.09:0,27,783	1/1:2,1:3:6.49:83,6,0	1/1:5,12:17:17:576,17,0	1/1:5,13:18:1.05:593,1,0	0/0:1,0:1:3.01:0,3,40
chr10	58094983	.	TCC	T	1625.34	PASS	AB=0.574;AC=15;AF=0.288;AN=52;BaseQRankSum=13.008;DP=360;FS=18.238;HRun=3;HaplotypeScore=97.0213;InbreedingCoeff=-0.0877;MQ=90.47;MQ0=0;MQRankSum=-12.521;QD=13.32;ReadPosRankSum=4.512;VQSLOD=-0.4034;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:51.17:0,51,982	0/0:1,0:1:2.97:0,3,20	0/0:22,0:22:57.18:0,57,1047	0/0:17,0:17:45.11:0,45,799	0/0:36,0:36:99:0,108,2085	0/0:30,0:30:87.29:0,87,1622	0/0:10,0:10:30.08:0,30,538	0/1:4,6:10:55.63:126,0,56	0/1:2,5:7:62.49:62,0,106	0/1:2,5:7:18.71:108,0,19	./.	0/0:11,0:11:33.11:0,33,634	0/0:16,0:16:45.15:0,45,868	0/0:23,0:23:69.24:0,69,1307	0/1:1,10:11:67.98:192,0,68	0/1:2,14:16:99:251,0,101	0/1:1,7:8:1.90:140,0,2	0/1:2,6:8:48.44:97,0,48	0/1:6,5:11:84.03:122,0,84	./.	0/1:1,7:8:13.84:14,0,99	0/0:21,0:21:63.22:0,63,1216	0/0:20,0:20:57.20:0,57,1101	0/0:11,0:11:33.11:0,33,638	1/1:1,1:2:3:28,3,0	0/1:4,12:16:16.71:304,0,17	0/1:4,13:17:43.75:322,0,44	1/1:1,0:1:2.22:7,2,0
chr10	58095212	.	ATCTATC	A	8837.53	PASS	AB=0.619;AC=29;AF=0.537;AN=54;BaseQRankSum=15.408;DP=453;FS=17.165;HRun=0;HaplotypeScore=147.3263;InbreedingCoeff=0.9042;MQ=78.14;MQ0=0;MQRankSum=-15.365;QD=49.65;ReadPosRankSum=0.878;VQSLOD=3.7117;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:69.24:0,69,2390	1/1:0,5:5:15.05:352,15,0	0/0:18,0:18:54.19:0,54,1587	0/0:19,0:19:47.75:0,48,1576	0/0:24,0:24:69.22:0,69,2371	0/0:29,0:29:87.30:0,87,3028	0/0:22,0:22:63.22:0,63,2239	1/1:4,13:17:42.14:944,42,0	1/1:1,11:12:30.10:659,30,0	1/1:5,16:21:38.87:920,39,0	1/1:3,10:13:30.09:644,30,0	0/0:14,0:14:42.14:0,42,1393	0/0:25,0:25:69.24:0,69,2417	0/0:26,0:26:72.23:0,72,2457	1/1:3,6:9:21.07:462,21,0	1/1:1,4:5:12.01:233,12,0	1/1:1,2:3:6.02:126,6,0	1/1:3,7:10:21.07:482,21,0	0/1:5,8:12:13.68:424,0,14	1/1:1,15:16:42.14:972,42,0	1/1:1,9:10:18.53:407,19,0	0/0:25,0:25:75.26:0,75,2601	0/0:27,0:27:81.26:0,81,2787	0/0:21,0:21:60.21:0,60,2129	1/1:3,17:20:42.14:990,42,0	1/1:5,11:16:33.07:728,33,0	1/1:1,7:8:21.07:495,21,0	./.
chr10	58095257	.	TCAACATGA	T	10931.55	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=15.700;DP=405;FS=9.731;HRun=0;HaplotypeScore=154.7536;InbreedingCoeff=0.9547;MQ=79.93;MQ0=0;MQRankSum=-15.476;QD=72.88;ReadPosRankSum=2.216;VQSLOD=4.8579;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:72.25:0,72,3164	1/1:0,5:5:15.01:383,15,0	0/0:21,0:21:60.15:0,60,2368	0/0:16,0:17:51.17:0,51,2086	0/0:25,0:25:75.26:0,75,3356	0/0:25,0:25:75.26:0,75,3318	0/0:24,0:24:72.21:0,72,2950	1/1:0,19:19:45.14:1296,45,0	1/1:0,15:15:39.09:1109,39,0	1/1:0,14:14:33.11:997,33,0	1/1:0,10:10:14.92:309,15,0	0/0:9,0:9:27.09:0,27,1250	0/0:22,0:22:66.23:0,66,2959	0/0:22,0:22:66.21:0,66,2817	1/1:0,13:13:36.12:1089,36,0	1/1:0,9:9:27.09:817,27,0	1/1:0,2:2:6.02:181,6,0	1/1:0,7:7:20.94:422,21,0	1/1:0,5:5:15.05:454,15,0	1/1:0,8:8:24.08:726,24,0	1/1:0,3:3:8.90:60,9,0	0/0:24,0:24:72.25:0,72,3014	0/0:18,0:18:54.19:0,54,2321	0/0:24,0:24:72.25:0,72,3211	1/1:0,9:9:27.02:744,27,0	1/1:0,17:17:39.13:1180,39,0	1/1:0,12:12:33.11:998,33,0	1/1:0,2:2:6.02:167,6,0
chr10	58095336	.	G	GA	5337.91	PASS	AC=30;AF=0.556;AN=54;BaseQRankSum=15.586;DP=419;FS=9.877;HRun=1;HaplotypeScore=83.0248;InbreedingCoeff=0.9363;MQ=84.15;MQ0=0;MQRankSum=-15.207;QD=40.75;ReadPosRankSum=-0.851;VQSLOD=4.4127;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:69.23:0,69,958	1/1:0,1:1:3.01:42,3,0	0/0:22,0:21:63.20:0,63,856	0/0:24,0:23:60.11:0,60,810	0/0:41,0:41:99:0,123,1697	0/0:26,0:26:72.23:0,72,987	0/0:21,0:21:63.21:0,63,879	1/1:0,16:16:42.12:591,42,0	1/1:0,14:14:39.13:579,39,0	1/1:0,16:16:48.16:716,48,0	1/1:0,7:7:18.06:268,18,0	0/0:16,0:16:48.15:0,48,656	0/0:17,0:17:51.16:0,51,696	0/0:26,0:26:78.26:0,78,1091	1/1:0,12:12:33.11:490,33,0	1/1:0,10:10:30.10:447,30,0	1/1:0,6:6:12.04:177,12,0	1/1:0,7:7:21.07:313,21,0	1/1:0,9:7:18.06:268,18,0	1/1:0,2:2:6.02:88,6,0	./.	0/0:18,0:18:54.17:0,54,735	0/0:26,0:26:78.26:0,78,1091	0/0:24,0:23:72.24:0,72,1006	1/1:0,3:3:9.03:131,9,0	1/1:0,13:13:39.13:581,39,0	1/1:0,12:12:36.09:511,36,0	1/1:0,3:3:9.03:136,9,0
chr10	58095556	.	A	AG	11262.51	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=11.745;DP=722;FS=5.699;HRun=3;HaplotypeScore=124.6424;InbreedingCoeff=0.9988;MQ=79.00;MQ0=0;MQRankSum=-9.392;QD=36.21;ReadPosRankSum=2.765;VQSLOD=3.7644;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,123,1415	0/0:7,0:7:18.05:0,18,214	0/0:27,0:27:74.99:0,75,825	0/0:30,0:30:76.20:0,76,899	0/0:39,0:39:99:0,111,1319	0/0:39,0:39:99:0,114,1358	0/0:13,0:13:36.11:0,36,432	0/0:42,0:42:99:0,108,1220	1/1:1,25:26:75.25:1048,75,0	1/1:2,29:31:78.26:1085,78,0	1/1:0,16:16:36.03:478,36,0	0/0:11,0:11:33.10:0,33,396	0/0:27,0:27:75.22:0,75,889	0/0:24,0:24:69.20:0,69,818	1/1:1,23:24:57.19:797,57,0	1/1:1,21:21:63.10:848,63,0	0/0:27,0:27:72.21:0,72,852	1/1:1,26:27:66.22:923,66,0	1/1:0,19:19:57.19:794,57,0	1/1:4,23:27:69.14:897,69,0	1/1:3,17:20:48.05:626,48,0	0/0:31,0:31:93.20:0,93,1084	0/0:22,0:22:66.20:0,66,791	0/0:27,0:27:78.16:0,78,888	1/1:0,26:26:75.25:1042,75,0	1/1:0,23:23:63.15:842,63,0	1/1:4,28:32:81.27:1128,81,0	1/1:0,18:18:54.18:755,54,0
chr10	58095685	.	C	CTA	11206.85	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=17.960;DP=545;FS=2.910;HRun=0;HaplotypeScore=132.7701;InbreedingCoeff=0.9849;MQ=85.57;MQ0=0;MQRankSum=-18.033;QD=46.31;ReadPosRankSum=0.460;VQSLOD=5.5877;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,108,1735	1/1:3,5:8:21.07:418,21,0	0/0:27,0:27:75.23:0,75,1132	0/0:28,0:28:75.17:0,75,1177	0/0:24,0:24:66.23:0,66,1072	0/0:24,0:24:72.25:0,72,1172	0/0:17,0:17:51.17:0,51,819	1/1:14,25:40:99:2118,108,0	1/1:1,18:21:54.18:1092,54,0	1/1:8,12:21:54.17:1046,54,0	1/1:2,8:10:15.05:302,15,0	0/0:17,0:17:51.17:0,51,832	0/0:31,0:31:93.25:0,93,1417	0/0:18,0:18:54.18:0,54,881	1/1:3,10:14:36.12:726,36,0	1/1:4,14:18:48.16:969,48,0	1/1:2,8:10:27.09:545,27,0	1/1:2,5:9:18.06:357,18,0	1/1:5,8:13:30.10:600,30,0	1/1:3,15:18:39.13:789,39,0	1/1:2,14:16:21.07:425,21,0	0/0:31,0:31:93.29:0,93,1470	0/0:26,0:26:78.27:0,78,1263	0/0:23,0:23:63.20:0,63,1004	1/1:3,6:9:15.05:303,15,0	1/1:2,13:16:33.11:667,33,0	1/1:2,12:16:33.11:668,33,0	1/1:0,3:3:9.03:182,9,0
chr10	58095880	.	CAG	C	8374.10	PASS	AB=0.514;AC=31;AF=0.554;AN=56;BaseQRankSum=18.080;DP=566;FS=4.503;HRun=0;HaplotypeScore=136.4114;InbreedingCoeff=0.9184;MQ=59.60;MQ0=0;MQRankSum=-15.279;QD=32.33;ReadPosRankSum=-3.469;VQSLOD=5.7004;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:41:99:0,123,2336	1/1:0,5:5:12.04:183,12,0	0/0:29,0:24:66.09:0,66,1171	0/0:27,0:24:51.17:0,51,1068	0/0:33,0:33:99:0,99,1872	0/0:21,0:21:60.21:0,60,1149	0/0:22,0:22:59.04:0,59,1148	1/1:1,32:33:80.81:1196,81,0	1/1:0,12:12:30.10:458,30,0	1/1:2,14:16:33.09:483,33,0	1/1:0,12:11:26.81:315,27,0	0/0:12,0:12:33.10:0,33,604	0/0:26,0:26:78.24:0,78,1439	0/0:32,0:32:96.30:0,96,1787	1/1:0,19:19:51.09:749,51,0	1/1:1,19:20:51:721,51,0	1/1:3,11:14:24:338,24,0	0/1:1,17:18:11.45:554,0,11	1/1:1,14:14:36.08:497,36,0	1/1:2,25:27:62.89:815,63,0	1/1:0,17:17:23.99:314,24,0	0/0:23,0:23:69.22:0,69,1288	0/0:23,0:23:66.21:0,66,1240	0/0:17,0:17:48.16:0,48,927	1/1:2,22:24:59.78:771,60,0	1/1:0,13:13:39.06:568,39,0	1/1:0,10:10:18.06:275,18,0	1/1:0,4:4:9.03:138,9,0
chr10	58096115	.	GGAGGATAGAAAT	G	16164.79	PASS	AC=30;AF=0.556;AN=54;BaseQRankSum=16.526;DP=505;FS=6.745;HRun=0;HaplotypeScore=224.7610;InbreedingCoeff=0.9876;MQ=86.39;MQ0=0;MQRankSum=-15.805;QD=78.85;ReadPosRankSum=5.789;VQSLOD=3.8485;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:87.30:0,87,4995	1/1:0,7:7:12.04:463,12,0	0/0:33,0:33:92.46:0,92,4480	0/0:22,0:22:57.14:0,57,2775	0/0:32,0:32:91.19:0,91,5270	0/0:29,0:29:87.28:0,87,5048	0/0:23,0:23:69.20:0,69,3641	1/1:4,9:13:24.07:835,24,0	1/1:4,17:21:45.15:1736,45,0	1/1:3,11:14:27.02:773,27,0	1/1:2,12:14:27.09:1026,27,0	0/0:15,0:15:42.14:0,42,2190	0/0:23,0:23:69.24:0,69,4011	0/0:14,0:14:39.13:0,39,2428	1/1:4,18:22:45.15:1736,45,0	1/1:5,11:16:27.09:1042,27,0	1/1:1,8:9:21.07:808,21,0	1/1:5,7:12:19:919,19,0	1/1:4,6:10:18.06:695,18,0	1/1:1,15:16:30.10:1157,30,0	./.	0/0:19,0:19:57.20:0,57,3430	0/0:28,0:28:84.26:0,84,4520	0/0:23,0:23:66.23:0,66,3842	1/1:2,10:12:30.10:1158,30,0	1/1:2,14:16:42.14:1618,42,0	1/1:2,15:17:45.15:1736,45,0	1/1:1,5:6:12.04:463,12,0
chr10	58096740	.	AG	A	2581.68	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=1.680;DP=692;FS=5.138;HRun=1;HaplotypeScore=122.1580;InbreedingCoeff=0.9985;MQ=67.78;MQ0=1;MQRankSum=-0.157;QD=36.36;ReadPosRankSum=1.158;VQSLOD=3.2162;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,23:23:63.21:880,63,0	0/0:14,0:14:39.10:0,39,576	0/0:37,0:35:66.22:0,66,1362	0/0:26,0:25:71.37:0,71,1061	1/1:2,23:25:71.05:969,71,0	0/0:25,0:25:75.22:0,75,1138	0/0:17,0:17:51.15:0,51,765	0/0:25,0:25:75.22:0,75,1133	0/0:19,0:19:57.18:0,57,888	0/0:28,0:28:84.28:0,84,1310	0/0:16,0:16:48.14:0,48,739	0/0:28,0:28:84.27:0,84,1314	0/0:23,0:23:69.22:0,69,1079	0/0:17,0:17:51.12:0,51,784	0/0:24,0:24:72.20:0,72,1097	1/1:1,22:23:21.29:875,21,0	0/0:13,0:13:39.13:0,39,615	0/0:47,0:47:99:0,132,2012	0/0:29,0:28:84.27:0,84,1298	0/0:27,0:27:81.25:0,81,1268	0/0:25,0:25:75.26:0,75,1192	0/0:31,0:31:93.32:0,93,1479	0/0:32,0:32:90.28:0,90,1391	0/0:24,0:24:69.24:0,69,1100	0/0:20,0:20:57.19:0,57,906	0/0:30,0:30:90.30:0,90,1417	0/0:31,0:31:93.29:0,93,1439	0/0:13,0:13:39.13:0,39,623
chr10	58096931	.	G	GA	15942.85	PASS	AB=0.711;AC=31;AF=0.554;AN=56;BaseQRankSum=13.334;DP=716;FS=5.518;HRun=1;HaplotypeScore=123.1334;InbreedingCoeff=0.9275;MQ=90.54;MQ0=0;MQRankSum=-3.297;QD=39.46;ReadPosRankSum=2.127;VQSLOD=4.3583;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,156,2005	1/1:0,8:8:24.08:359,24,0	0/0:34,0:34:92.78:0,93,1066	0/0:27,0:26:61.18:0,61,796	0/0:39,0:39:99:0,108,1400	0/0:24,0:24:72.22:0,72,919	0/0:14,0:14:42.14:0,42,543	1/1:0,25:25:75.21:1044,75,0	1/1:0,24:24:66.22:986,66,0	1/1:0,36:36:99:1552,105,0	1/1:1,25:26:69.23:1033,69,0	0/0:22,0:22:66.21:0,66,856	0/0:17,0:17:48.16:0,48,621	0/0:16,0:16:48.13:0,48,595	1/1:1,22:23:57.19:853,57,0	1/1:0,24:24:66.22:988,66,0	1/1:1,21:22:63.17:918,63,0	0/1:16,11:27:99:463,0,462	1/1:1,28:29:87.26:1251,87,0	1/1:0,29:29:81.18:1162,81,0	1/1:3,29:32:84.09:1201,84,0	0/0:20,0:20:60.16:0,60,748	0/0:26,0:26:78.25:0,78,1011	0/0:20,0:20:60.15:0,60,759	1/1:0,24:24:69.23:1034,69,0	1/1:0,24:24:72.24:1076,72,0	1/1:0,25:25:66.22:988,66,0	1/1:0,26:25:69.23:1033,69,0
chr10	58097162	.	A	AAC	3872.23	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-0.244;DP=686;FS=2.098;HRun=0;HaplotypeScore=88.3163;InbreedingCoeff=0.9985;MQ=82.75;MQ0=0;MQRankSum=-2.749;QD=43.02;ReadPosRankSum=-1.049;VQSLOD=4.4392;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,141,1999	1/1:2,8:10:21.07:366,21,0	0/0:26,0:26:69.06:0,69,906	0/0:33,0:33:90.22:0,90,1189	0/0:25,0:25:75.25:0,75,1063	0/0:14,0:14:33.09:0,33,454	0/0:25,0:25:72.21:0,72,993	1/1:6,31:38:99:1748,99,0	0/0:28,0:28:81.27:0,81,1159	0/0:24,0:24:69.23:0,69,970	0/0:15,0:15:39.13:0,39,556	0/0:19,0:19:48.16:0,48,687	0/0:12,0:12:36.12:0,36,516	0/0:23,0:23:69.23:0,69,988	0/0:29,0:29:87.29:0,87,1245	0/0:32,0:32:93.31:0,93,1330	1/1:1,27:28:63.22:1154,63,0	1/1:1,13:14:33.11:603,33,0	0/0:28,0:28:72.24:0,72,1030	0/0:22,0:22:66.22:0,66,944	0/0:41,0:41:99:0,117,1638	0/0:24,0:24:72.24:0,72,1032	0/0:21,0:21:60.20:0,60,857	0/0:17,0:17:51.16:0,51,706	0/0:19,0:19:54.17:0,54,759	0/0:31,0:31:87.29:0,87,1230	0/0:26,0:25:78.26:0,78,1115	0/0:11,0:11:30.09:0,30,413
chr10	58097631	.	A	ACT	2577.46	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-1.369;DP=704;FS=4.093;HRun=0;HaplotypeScore=106.4830;InbreedingCoeff=0.9878;MQ=88.80;MQ0=1;MQRankSum=-1.881;QD=41.57;ReadPosRankSum=2.899;VQSLOD=5.3345;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,21:21:51.17:869,51,0	0/0:5,0:5:15.05:0,15,200	0/0:27,0:27:66.20:0,66,856	0/0:34,0:34:63.19:0,63,811	1/1:2,37:40:99:1830,108,0	0/0:22,0:22:63.21:0,63,839	0/0:15,0:15:45.11:0,45,567	0/0:37,0:37:90.24:0,90,1129	0/0:24,0:24:69.19:0,69,874	0/0:32,0:32:78.25:0,78,1025	0/0:22,0:22:66.18:0,66,841	0/0:18,0:18:45.15:0,45,599	0/0:25,0:25:63.20:0,63,825	0/0:22,0:22:66.14:0,66,842	0/0:24,0:23:72.20:0,72,915	0/0:26,0:26:72.22:0,72,941	0/0:24,0:24:69.20:0,69,901	0/0:35,0:35:99:0,102,1338	0/0:26,0:26:75.23:0,75,972	0/0:34,0:34:96.30:0,96,1262	0/0:26,0:26:75.19:0,75,961	0/0:25,0:25:66.22:0,66,878	0/0:22,0:22:63.19:0,63,810	0/0:19,0:19:51.17:0,51,679	0/0:20,0:20:60.20:0,60,799	0/0:35,0:35:99:0,105,1340	0/0:33,0:33:99:0,99,1286	0/0:10,0:10:18.06:0,18,239
chr10	58105293	.	T	TC	17665.63	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=6.387;DP=708;FS=6.183;HRun=1;HaplotypeScore=86.3091;InbreedingCoeff=0.9991;MQ=82.67;MQ0=0;MQRankSum=-4.780;QD=41.96;ReadPosRankSum=0.893;VQSLOD=5.0198;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,120,1541	1/1:0,8:8:24.08:360,24,0	0/0:21,0:21:57.95:0,58,760	0/0:25,0:25:63.14:0,63,762	0/0:24,0:24:69.22:0,69,895	0/0:20,0:20:60.19:0,60,779	0/0:16,0:16:48.16:0,48,622	1/1:3,28:31:87.28:1277,87,0	1/1:0,26:26:78.26:1169,78,0	1/1:0,35:35:99:1523,102,0	1/1:0,30:30:87.29:1303,87,0	0/0:17,0:17:48.14:0,48,608	0/0:17,0:17:51.15:0,51,648	0/0:20,0:20:60.19:0,60,779	1/1:1,28:29:81.27:1214,81,0	1/1:0,25:25:69.23:1034,69,0	1/1:1,36:37:99:1529,102,0	1/1:0,12:12:33.11:494,33,0	1/1:1,16:17:48.12:689,48,0	1/1:0,29:29:81.27:1213,81,0	1/1:2,33:35:93.32:1394,93,0	0/0:24,0:24:66.21:0,66,855	0/0:27,0:27:81.26:0,81,1049	0/0:36,0:36:99:0,105,1363	1/1:0,19:19:54.18:808,54,0	1/1:2,35:37:99:1549,105,0	1/1:2,41:44:99:1795,120,0	1/1:0,7:7:21.07:315,21,0
chr10	58106968	.	C	CA	17624.16	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-14.626;DP=669;FS=9.021;HRun=0;HaplotypeScore=64.7803;InbreedingCoeff=0.9994;MQ=64.47;MQ0=1;MQRankSum=1.037;QD=40.42;ReadPosRankSum=1.843;VQSLOD=5.2248;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,36:36:93.32:1453,93,0	1/1:0,15:15:39.13:608,39,0	0/0:34,0:29:52.90:0,53,955	0/0:28,0:27:74.97:0,75,960	1/1:0,32:32:84.22:1269,84,0	0/0:18,0:18:54.09:0,54,728	0/0:22,0:22:60.20:0,60,838	1/1:3,28:31:81.12:1136,81,0	1/1:1,22:23:63.21:985,63,0	1/1:0,25:25:75.16:1102,75,0	1/1:0,20:20:48.16:749,48,0	0/0:18,0:18:54.16:0,54,721	0/0:22,0:22:63.21:0,63,879	0/0:28,0:28:84.27:0,84,1156	1/1:0,21:21:57.19:891,57,0	1/1:1,20:21:54.18:844,54,0	1/1:1,27:28:66.22:1032,66,0	1/1:0,15:15:39.13:609,39,0	1/1:0,18:17:54.11:792,54,0	1/1:0,31:31:87.24:1311,87,0	1/1:0,39:39:99:1548,99,0	0/0:20,0:20:60.19:0,60,820	0/0:25,0:25:75.18:0,75,1021	0/0:17,0:17:51.16:0,51,695	1/1:0,21:21:60.20:928,60,0	1/1:1,19:20:54.17:821,54,0	1/1:0,29:29:78.27:1218,78,0	1/1:0,11:11:21.07:328,21,0
chr10	58107312	.	C	CA	2460.11	PASS	AB=1.000;AC=35;AF=0.625;AN=56;BaseQRankSum=10.096;DP=484;FS=2.322;HRun=0;HaplotypeScore=108.0378;InbreedingCoeff=0.8614;MQ=42.08;MQ0=143;MQRankSum=-3.887;QD=9.15;ReadPosRankSum=2.693;VQSLOD=3.5876;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:10:20.86:107,21,0	1/1:6,2:8:22.74:177,23,0	0/0:35,0:4:9.01:0,9,104	0/0:62,0:17:10.76:0,11,228	1/1:7,0:6:13.80:52,14,0	0/0:19,0:18:51.07:0,51,612	0/0:21,0:10:21.04:0,21,272	1/1:15,5:16:30.88:306,31,0	1/1:10,0:10:27.05:198,27,0	1/1:13,0:11:28.42:176,28,0	1/1:5,0:5:13.26:76,13,0	0/0:11,0:9:27.08:0,27,354	0/0:9,0:7:18.06:0,18,250	0/0:10,0:8:24.08:0,24,333	1/1:22,1:23:54.50:356,55,0	1/1:10,1:10:26.06:189,26,0	1/1:25,2:9:23.36:190,23,0	1/1:20,0:4:2.94:53,3,0	0/1:15,0:6:15.39:74,0,15	1/1:11,0:9:19.47:104,19,0	1/1:41,0:9:15.34:95,15,0	0/0:12,0:11:24.06:0,24,305	0/0:10,0:10:26.56:0,27,320	0/0:26,0:8:21.07:0,21,294	1/1:11,0:10:25.85:162,26,0	1/1:12,1:12:22.15:202,22,0	1/1:14,0:12:25.95:122,26,0	1/1:4,0:3:8.24:40,8,0
chr10	58107325	.	TC	T	2739.41	PASS	AC=36;AF=0.667;AN=54;BaseQRankSum=8.828;DP=366;FS=5.037;HRun=3;HaplotypeScore=83.5039;InbreedingCoeff=0.8268;MQ=29.79;MQ0=128;MQRankSum=-5.000;QD=12.74;ReadPosRankSum=3.999;VQSLOD=2.3449;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,8:9:18.05:210,18,0	1/1:0,5:5:15.05:184,15,0	./.	0/0:43,0:8:6.93:0,7,51	1/1:2,5:6:17.96:183,18,0	0/0:11,0:11:15.50:0,15,166	0/0:20,0:9:21.01:0,21,239	1/1:12,1:9:5.54:53,6,0	1/1:0,6:6:18.05:209,18,0	1/1:3,7:8:21.06:250,21,0	1/1:1,2:3:6.02:72,6,0	0/0:8,0:6:9:0,9,109	0/0:7,0:5:12.04:0,12,171	0/0:8,0:6:18.05:0,18,231	1/1:5,10:15:30.08:346,30,0	1/1:1,6:6:18.05:206,18,0	1/1:17,3:4:9.02:102,9,0	1/1:18,1:3:2.04:6,2,0	1/1:7,3:2:6.02:70,6,0	1/1:5,6:9:14.97:150,15,0	1/1:34,6:7:8.97:91,9,0	0/0:7,0:6:13.29:0,13,175	0/0:5,0:5:15.03:0,15,195	0/0:26,0:8:18.03:0,18,220	1/1:1,6:6:15.04:178,15,0	1/1:2,10:11:30.09:357,30,0	1/1:6,7:11:21.02:234,21,0	1/1:2,1:3:3.01:37,3,0
chr10	58107331	.	C	CTT	2618.25	PASS	AC=34;AF=0.654;AN=52;BaseQRankSum=7.504;DP=293;FS=3.018;HRun=2;HaplotypeScore=78.4857;InbreedingCoeff=0.7255;MQ=23.55;MQ0=117;MQRankSum=-3.435;QD=15.58;ReadPosRankSum=4.237;VQSLOD=1.3646;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:8:17.92:217,18,0	1/1:5,0:5:11.62:140,12,0	./.	0/0:30,0:2:0:0,0,0	1/1:7,0:6:15.02:198,15,0	0/0:6,0:6:14.40:0,14,163	0/0:16,0:6:12.02:0,12,166	1/1:5,6:7:17.63:252,18,0	1/1:6,0:6:17.85:212,18,0	1/1:8,0:7:6.80:182,7,0	1/1:2,0:2:6.02:88,6,0	0/0:4,0:3:8.96:0,9,116	0/0:6,0:4:6.02:0,6,97	0/0:5,0:4:12.02:0,12,161	1/1:10,0:10:26.44:317,26,0	1/1:7,0:6:11.96:168,12,0	1/1:18,0:3:9.03:146,9,0	./.	1/1:9,0:2:0.82:39,1,0	1/1:7,0:5:0.46:71,0,0	1/1:39,0:6:5.88:43,6,0	0/0:6,0:5:13.60:0,14,199	0/0:4,0:4:9.50:0,10,135	0/0:21,0:3:9.03:0,9,147	1/1:6,0:5:14.98:202,15,0	1/1:10,0:10:21.58:300,22,0	1/1:9,0:7:17.66:192,18,0	1/1:1,0:1:3:29,3,0
chr10	58107332	.	C	CTTT	3938.39	PASS	AB=1.000;AC=35;AF=0.673;AN=52;BaseQRankSum=7.658;DP=270;FS=6.566;HRun=0;HaplotypeScore=66.7438;InbreedingCoeff=0.7649;MQ=23.08;MQ0=115;MQRankSum=-4.551;QD=21.88;ReadPosRankSum=3.090;VQSLOD=2.7897;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,3:8:18.01:317,18,0	1/1:4,1:5:14.95:227,15,0	./.	0/1:27,0:2:0.13:0,0,0	1/1:3,3:5:15.04:279,15,0	0/0:5,0:5:10.78:0,11,113	0/0:16,0:6:12:0,12,139	1/1:10,0:6:18.05:245,18,0	1/1:3,3:6:17.96:301,18,0	1/1:4,3:6:18.03:313,18,0	1/1:0,2:2:6.02:126,6,0	0/0:4,0:3:8.95:0,9,129	0/0:4,0:3:6.02:0,6,104	0/0:5,0:4:11.25:0,11,153	1/1:6,4:10:29.89:466,30,0	1/1:2,3:4:12:213,12,0	1/1:15,3:3:9.03:187,9,0	./.	1/1:7,1:2:5.98:86,6,0	1/1:2,1:2:5.93:86,6,0	1/1:36,1:4:3.01:43,3,0	0/0:6,0:5:13.60:0,14,216	0/0:4,0:4:10.25:0,10,97	0/0:21,0:3:9.03:0,9,167	1/1:3,3:5:14.98:280,15,0	1/1:5,5:10:29.96:498,30,0	1/1:3,3:4:11.99:224,12,0	1/1:1,0:1:3.01:46,3,0
chr10	58107335	.	TCC	T	1204.02	PASS	AC=34;AF=0.680;AN=50;BaseQRankSum=6.702;DP=246;FS=11.455;HRun=3;HaplotypeScore=69.7577;InbreedingCoeff=0.7045;MQ=23.08;MQ0=108;MQRankSum=-4.285;QD=8.30;ReadPosRankSum=3.913;VQSLOD=-0.6285;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:8:14.88:120,15,0	1/1:4,0:4:8.99:100,9,0	./.	./.	1/1:6,0:5:14.75:132,15,0	0/0:4,0:4:9.03:0,9,157	0/0:16,0:6:8.99:0,9,84	1/1:6,4:6:10.51:99,11,0	1/1:5,0:5:11.92:99,12,0	1/1:6,0:6:14.71:91,15,0	1/1:2,0:2:5.98:57,6,0	0/0:4,0:3:9.03:0,9,129	0/0:4,0:3:6:0,6,82	0/0:5,0:4:10.52:0,11,118	1/1:10,0:10:17.90:159,18,0	1/1:5,0:4:8.84:56,9,0	1/1:18,0:3:8.94:79,9,0	./.	1/1:7,0:2:2.90:16,3,0	1/1:2,0:1:2.97:20,3,0	1/1:37,0:4:2.96:19,3,0	0/0:5,0:4:12.04:0,12,196	0/0:3,0:3:4.83:0,5,40	0/0:21,0:3:9.03:0,9,151	1/1:4,0:4:11.90:100,12,0	1/1:9,0:9:20.64:148,21,0	1/1:6,0:4:8.91:61,9,0	1/1:1,0:1:2.98:21,3,0
chr10	58107336	.	C	CTT	2988.27	PASS	AC=34;AF=0.680;AN=50;BaseQRankSum=7.124;DP=222;FS=9.363;HRun=2;HaplotypeScore=53.8515;InbreedingCoeff=0.7105;MQ=22.60;MQ0=106;MQRankSum=-3.659;QD=23.53;ReadPosRankSum=3.768;VQSLOD=1.3542;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,3:6:15.01:247,15,0	1/1:1,2:3:9.03:174,9,0	./.	./.	1/1:5,1:5:15.05:259,15,0	0/0:4,0:4:8.94:0,9,111	0/0:15,0:5:8.94:0,9,79	1/1:10,0:6:18.01:186,18,0	1/1:3,1:4:12.04:227,12,0	1/1:3,2:5:15.05:284,15,0	1/1:2,0:2:6.02:119,6,0	0/0:4,0:3:8.94:0,9,89	0/0:4,0:3:6:0,6,73	0/0:5,0:4:10.52:0,11,109	1/1:4,2:6:18.06:344,18,0	1/1:4,0:3:9.03:155,9,0	1/1:18,0:3:9.03:156,9,0	./.	1/1:5,0:1:3.01:53,3,0	1/1:1,0:1:3.01:55,3,0	1/1:34,1:2:3.01:61,3,0	0/0:5,0:4:12.04:0,12,184	0/0:3,0:3:4.83:0,5,40	0/0:21,0:3:9.03:0,9,145	1/1:3,1:4:12.04:224,12,0	1/1:5,2:7:21.07:389,21,0	1/1:5,0:3:9.03:169,9,0	1/1:0,1:1:3.01:61,3,0
chr10	58107337	.	C	CTT	2499.59	PASS	AC=34;AF=0.680;AN=50;BaseQRankSum=6.789;DP=211;FS=12.415;HRun=0;HaplotypeScore=56.7259;InbreedingCoeff=0.6548;MQ=22.80;MQ0=98;MQRankSum=-4.292;QD=20.83;ReadPosRankSum=2.613;VQSLOD=2.7832;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,3:6:12.49:194,12,0	1/1:2,1:3:8.99:107,9,0	./.	./.	1/1:3,3:5:14.87:203,15,0	0/0:4,0:4:9.37:0,9,110	0/0:15,0:5:8.19:0,8,53	1/1:10,0:6:17.08:197,17,0	1/1:1,3:4:12.01:193,12,0	1/1:2,3:5:14.97:205,15,0	1/1:0,2:2:6.02:105,6,0	0/0:4,0:3:0.20:0,0,74	0/0:3,0:2:3.01:0,3,49	0/0:5,0:4:9.43:0,9,105	1/1:2,4:6:18:274,18,0	1/1:1,3:3:9.03:175,9,0	1/1:13,3:3:9.03:168,9,0	./.	1/1:4,1:1:3.01:54,3,0	1/1:0,1:1:3.01:58,3,0	1/1:29,1:2:3:28,3,0	0/0:5,0:4:11.97:0,12,155	0/0:3,0:3:4.76:0,5,23	0/0:21,0:3:9:0,9,90	1/1:1,3:4:12.01:194,12,0	1/1:2,5:7:20.96:314,21,0	1/1:2,3:3:9.03:174,9,0	1/1:1,0:1:2.98:22,3,0
chr10	58107453	.	C	CCTTCCTTT	16760.56	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=0.438;DP=438;FS=22.956;HRun=0;HaplotypeScore=108.7801;InbreedingCoeff=0.9516;MQ=60.99;MQ0=4;MQRankSum=-10.422;QD=64.22;ReadPosRankSum=1.793;VQSLOD=3.1620;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,33:38:57.20:2408,57,0	1/1:0,9:9:18.06:776,18,0	0/0:28,0:25:15.85:0,16,787	0/0:45,0:25:25.50:0,26,603	1/1:1,8:10:20.99:633,21,0	0/0:13,0:13:36.09:0,36,837	0/0:18,0:18:54.17:0,54,1278	1/1:19,0:19:47.48:866,47,0	1/1:0,16:17:39.13:1683,39,0	1/1:2,15:17:45:1404,45,0	1/1:1,6:8:12:405,12,0	0/0:13,0:13:30.10:0,30,774	0/0:11,0:11:33.10:0,33,720	0/0:8,0:8:21.06:0,21,508	1/1:0,12:13:18.06:775,18,0	1/1:0,7:10:15.52:647,16,0	1/1:1,14:18:15.05:553,15,0	1/1:2,12:15:26.69:1146,27,0	1/1:5,15:20:51.17:1150,51,0	1/1:6,7:13:36.11:1268,36,0	1/1:6,19:27:17.75:579,18,0	0/0:9,0:9:27.08:0,27,634	0/0:7,0:7:21.06:0,21,471	0/0:20,0:20:57.16:0,57,1376	1/1:0,6:6:12.04:518,12,0	1/1:0,12:12:36.07:1147,36,0	1/1:1,5:7:18.06:764,18,0	1/1:1,0:1:3.01:38,3,0
chr10	58110228	.	ATTTTTT	A	8292.80	PASS	AB=0.679;AC=34;AF=0.607;AN=56;BaseQRankSum=11.613;DP=429;FS=5.460;HRun=15;HaplotypeScore=141.6601;InbreedingCoeff=0.7640;MQ=69.79;MQ0=2;MQRankSum=-13.506;QD=30.83;ReadPosRankSum=7.483;VQSLOD=2.5851;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,10:19:21.55:441,22,0	1/1:0,0:4:11.50:60,12,0	0/0:16,0:15:27.13:0,27,468	0/0:16,0:11:19.86:0,20,296	1/1:5,16:22:38.82:703,39,0	0/0:14,0:15:42.13:0,42,1099	0/0:7,0:9:24.05:0,24,548	0/1:10,0:18:23.41:65,0,23	1/1:2,8:10:18.02:334,18,0	1/1:6,19:23:51:939,51,0	1/1:4,11:13:17.92:334,18,0	0/0:22,0:23:60.19:0,60,1604	0/0:13,0:16:33.11:0,33,890	0/0:8,0:9:27.09:0,27,808	1/1:3,12:15:32.98:612,33,0	1/1:2,13:15:36.53:669,37,0	0/1:6,0:12:27.58:30,0,28	1/1:7,8:15:17.83:334,18,0	1/1:4,5:9:12:221,12,0	1/1:5,15:18:39.05:716,39,0	1/1:3,1:4:2.96:56,3,0	0/0:13,0:16:45.15:0,45,1313	0/0:11,0:19:30.57:0,31,803	0/0:16,0:18:54.19:0,54,1586	1/1:5,4:7:2.82:55,3,0	1/1:3,20:24:62.95:1067,63,0	1/1:4,28:32:87.20:1602,87,0	1/1:0,1:1:3.01:56,3,0
chr10	58110276	.	G	GTTT	9573.45	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=4.508;DP=472;FS=7.599;HRun=8;HaplotypeScore=106.3193;InbreedingCoeff=0.9742;MQ=79.73;MQ0=1;MQRankSum=-8.844;QD=29.55;ReadPosRankSum=0.335;VQSLOD=2.9476;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,0:25:53.79:414,54,0	1/1:0,0:6:7.48:16,7,0	0/0:23,0:23:48.08:0,48,600	0/0:11,0:11:24.05:0,24,300	1/1:8,0:19:38.83:299,39,0	0/0:15,0:15:42.11:0,42,536	0/0:10,0:10:21.04:0,21,276	1/1:0,0:29:39.63:121,40,0	1/1:2,5:8:15.05:303,15,0	1/1:8,13:20:45.15:893,45,0	1/1:1,14:13:38.12:670,38,0	0/0:8,0:8:21.06:0,21,276	0/0:16,0:16:22.27:0,22,477	0/0:13,0:13:36.11:0,36,473	1/1:5,14:19:48.12:923,48,0	1/1:3,0:20:44.41:344,44,0	1/1:2,0:16:14.18:30,14,0	1/1:3,0:22:56.78:437,57,0	1/1:4,12:16:27.07:488,27,0	1/1:4,16:19:53.21:1010,53,0	1/1:2,2:5:15.03:251,15,0	0/0:22,0:22:66.21:0,66,865	0/0:17,0:17:48.12:0,48,592	0/0:13,0:13:36.11:0,36,471	1/1:1,12:15:33.93:591,34,0	1/1:10,16:25:48.16:965,48,0	1/1:7,25:34:81.23:1593,81,0	1/1:1,4:5:12.04:225,12,0
chr10	58113369	.	GCT	G	1107.73	PASS	AB=1.000;AC=15;AF=0.536;AN=28;BaseQRankSum=1.335;DP=260;FS=7.883;HRun=0;HaplotypeScore=21.8368;InbreedingCoeff=0.6124;MQ=37.07;MQ0=128;MQRankSum=0.113;QD=17.58;ReadPosRankSum=-0.788;VQSLOD=1.4001;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	1/1:0,3:3:6.01:70,6,0	0/0:13,0:2:6.02:0,6,95	0/1:11,0:2:0:0,0,0	1/1:0,5:5:6.02:85,6,0	./.	0/0:9,0:1:3.01:0,3,55	1/1:4,8:1:3.01:43,3,0	./.	1/1:1,7:8:18.06:257,18,0	./.	0/0:16,0:8:3.01:0,3,55	0/0:8,0:3:3.01:0,3,39	./.	./.	./.	./.	./.	./.	1/1:0,6:5:12.04:171,12,0	./.	0/0:11,0:8:9.03:0,9,160	0/0:10,0:7:6.02:0,6,110	./.	1/1:0,9:9:24.08:343,24,0	1/1:1,8:6:18.06:258,18,0	./.	./.
chr10	58113631	.	C	CG	709.16	PASS	AB=0.500;AC=15;AF=0.577;AN=26;BaseQRankSum=-0.308;DP=200;FS=0.000;HRun=2;HaplotypeScore=21.8288;InbreedingCoeff=0.6578;MQ=38.20;MQ0=87;MQRankSum=-0.568;QD=10.74;ReadPosRankSum=-1.898;VQSLOD=0.8221;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:3,0:1:3.01:0,3,35	./.	./.	0/0:5,0:5:12.04:0,12,148	0/0:20,0:11:11.73:0,12,148	./.	1/1:3,4:5:6.02:81,6,0	1/1:4,6:8:5.98:59,6,0	./.	0/0:1,0:1:3.01:0,3,37	./.	./.	1/1:0,8:8:6.02:73,6,0	0/1:0,1:1:0:0,0,0	./.	1/1:0,12:3:6.02:86,6,0	1/1:0,7:6:11.99:132,12,0	./.	./.	0/0:7,0:5:11.50:0,11,97	./.	./.	./.	1/1:1,11:10:21.06:281,21,0	1/1:0,9:8:8.64:115,9,0	./.
chr10	58113720	.	T	TGC	1582.55	PASS	AB=0.809;AC=30;AF=0.577;AN=52;BaseQRankSum=4.309;DP=387;FS=13.410;HRun=0;HaplotypeScore=102.2470;InbreedingCoeff=0.4498;MQ=29.24;MQ0=90;MQRankSum=-4.744;QD=8.03;ReadPosRankSum=3.236;VQSLOD=2.1970;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:22,1:22:15.13:15,0,33	0/1:3,3:5:18.24:18,0,24	./.	./.	1/1:5,1:4:2.97:20,3,0	0/0:12,0:11:14.98:0,15,195	0/0:19,0:14:17.91:0,18,195	1/1:17,0:10:6.66:134,7,0	0/1:8,2:8:25.54:79,0,26	1/1:12,1:8:17.42:133,17,0	1/1:9,2:7:4.59:14,5,0	0/0:9,0:8:18:0,18,223	0/0:8,0:8:17.90:0,18,179	0/0:12,0:10:19.14:0,19,197	1/1:3,2:6:9.03:109,9,0	1/1:5,3:8:0.66:112,1,0	1/1:9,2:5:0.41:105,0,0	0/1:5,1:5:20.24:20,0,35	1/1:17,0:14:29.32:188,29,0	1/1:5,0:5:2.96:19,3,0	0/0:25,1:17:2.23:0,2,20	0/0:16,0:15:17.89:0,18,242	0/0:15,0:14:8.99:0,9,112	0/0:30,0:19:17.77:0,18,192	1/1:6,4:10:12.04:152,12,0	1/1:24,2:23:36:459,36,0	1/1:10,4:11:17.83:173,18,0	1/1:6,0:1:2.74:12,3,0
chr10	58113724	.	T	TGCGTGTGC	2662.81	PASS	AB=0.905;AC=24;AF=0.462;AN=52;BaseQRankSum=4.327;DP=389;FS=1.124;HRun=0;HaplotypeScore=122.3961;InbreedingCoeff=0.3338;MQ=29.93;MQ0=85;MQRankSum=-5.538;QD=12.39;ReadPosRankSum=1.201;VQSLOD=2.5483;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:22:9.18:130,0,9	0/1:4,0:5:0.21:114,0,0	./.	./.	1/1:6,0:5:3.01:47,3,0	0/0:13,0:12:17.98:0,18,339	0/0:19,0:14:21.02:0,21,385	0/1:18,0:11:18.05:58,0,18	1/1:8,1:8:13.02:246,13,0	0/1:13,1:9:4.23:267,0,4	1/1:9,2:7:6.02:69,6,0	0/0:9,0:8:15.05:0,15,412	0/0:8,0:8:17.99:0,18,302	0/0:12,0:10:20.99:0,21,350	1/1:5,1:6:9.03:271,9,0	1/1:6,0:8:0.08:137,0,0	0/1:9,0:5:0.60:55,0,1	0/1:6,0:5:25.12:79,0,25	0/1:17,0:13:7.16:90,0,7	0/0:6,0:6:1.25:0,1,3	1/1:26,1:19:8.62:44,9,0	0/0:16,0:15:17.64:0,18,448	0/0:14,0:13:9.03:0,9,210	0/0:32,0:21:20.97:0,21,362	1/1:6,3:10:12.04:375,12,0	1/1:24,2:22:19.88:572,20,0	0/1:12,2:13:10.91:277,0,11	0/0:6,0:2:2.74:0,3,12
chr10	58113728	.	T	TGC	151.86	PASS	AB=0.951;AC=14;AF=0.269;AN=52;BaseQRankSum=6.171;DP=393;FS=11.112;HRun=0;HaplotypeScore=105.4484;InbreedingCoeff=-0.1156;MQ=31.01;MQ0=81;MQRankSum=-3.400;QD=0.97;ReadPosRankSum=4.203;VQSLOD=0.7790;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:22:14.36:0,14,100	0/1:5,1:5:10.78:24,0,11	./.	./.	1/1:6,0:5:2.96:19,3,0	0/0:14,0:13:20.97:0,21,244	0/0:17,0:14:20.86:0,21,214	0/1:19,0:12:40.03:40,0,69	0/1:8,1:8:31.15:31,0,61	0/1:14,0:9:2.28:2,0,82	0/0:9,0:7:5.64:0,6,27	0/0:8,0:7:15.03:0,15,204	0/0:9,0:9:20.91:0,21,205	0/0:12,0:10:20.83:0,21,211	0/1:7,0:7:11.59:12,0,28	0/1:8,0:8:0.27:0,0,16	0/1:8,2:5:17.76:83,0,18	0/1:8,1:7:6.29:12,0,6	0/1:16,0:12:0.38:0,0,158	0/0:6,0:6:2.90:0,3,16	0/0:28,0:20:17.60:0,18,130	0/0:15,0:14:17.89:0,18,242	0/0:17,0:16:9.01:0,9,115	0/0:33,0:22:23.78:0,24,242	0/1:10,1:11:11.71:52,0,12	0/1:27,0:23:0.04:0,0,219	0/1:15,0:13:6.35:6,0,71	0/0:8,0:3:7.69:0,8,41
chr10	58113782	.	CATGTGTGAGATCTTTTG	C	1642.70	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=5.371;DP=435;FS=23.243;HRun=0;HaplotypeScore=209.4453;InbreedingCoeff=0.9241;MQ=78.21;MQ0=6;MQRankSum=-4.945;QD=78.22;ReadPosRankSum=1.194;VQSLOD=1.7053;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:34:99:0,99,7508	1/1:3,5:8:12.04:591,12,0	0/0:21,0:19:57.13:0,57,3230	0/0:23,0:22:61.56:0,62,4205	0/0:9,0:9:27.09:0,27,1824	0/0:16,0:16:48.16:0,48,3743	0/0:20,0:20:51.16:0,51,3852	1/1:0,6:6:15.05:739,15,0	0/0:14,0:14:42.14:0,42,2552	0/0:20,0:20:57.20:0,57,4424	0/0:3,0:3:9.03:0,9,750	0/0:13,0:13:33.11:0,33,2286	0/0:12,0:12:36.12:0,36,2913	0/0:14,0:14:42.14:0,42,3407	0/0:11,0:11:30.10:0,30,2324	0/0:9,0:9:27.09:0,27,1676	1/1:3,4:7:8.53:443,9,0	0/0:10,0:10:27.09:0,27,2142	0/0:14,0:14:42.14:0,42,3098	0/0:8,0:8:18.06:0,18,1482	0/0:34,0:32:93.32:0,93,6845	0/0:20,0:20:60.21:0,60,4585	0/0:13,0:13:36.12:0,36,2722	0/0:33,0:32:90.31:0,90,6864	0/0:17,0:17:51.18:0,51,4144	0/0:20,0:20:60.21:0,60,4540	0/0:20,0:20:57.17:0,57,4085	0/0:5,0:4:12.04:0,12,999
chr10	58114529	.	A	AG	12210.93	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=10.415;DP=587;FS=18.838;HRun=2;HaplotypeScore=91.1103;InbreedingCoeff=0.9945;MQ=99.18;MQ0=0;MQRankSum=-6.910;QD=34.20;ReadPosRankSum=3.483;VQSLOD=3.1571;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:10,26:36:81.27:1165,81,0	1/1:0,16:16:39.10:539,39,0	0/0:32,0:32:90.15:0,90,1065	0/0:35,0:35:95.26:0,95,1105	1/1:5,11:16:33.11:467,33,0	0/0:17,0:17:39.12:0,39,483	0/0:26,0:26:67.93:0,68,860	1/1:4,12:16:33.11:475,33,0	1/1:0,14:14:36.12:518,36,0	1/1:6,15:21:45.14:639,45,0	1/1:4,13:17:45.08:621,45,0	0/0:17,0:17:41.99:0,42,488	0/0:21,0:21:63.18:0,63,766	0/0:20,0:20:60.09:0,60,706	1/1:1,31:32:78.26:1122,78,0	1/1:0,22:22:60.20:862,60,0	1/1:1,24:25:69.23:993,69,0	1/1:1,25:26:69.23:993,69,0	1/1:3,16:19:51.16:713,51,0	1/1:1,11:12:30.10:432,30,0	1/1:3,19:22:45.15:648,45,0	0/0:11,0:11:24.08:0,24,297	0/0:20,0:20:24.07:0,24,298	0/0:31,0:31:87.27:0,87,1065	1/1:4,12:16:29.70:432,30,0	1/1:5,19:24:60.16:825,60,0	1/1:0,17:17:42.14:594,42,0	1/1:0,6:6:12.04:173,12,0
chr10	58115363	.	G	GT	13659.29	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-8.912;DP=604;FS=10.841;HRun=8;HaplotypeScore=58.3550;InbreedingCoeff=0.9919;MQ=72.01;MQ0=0;MQRankSum=-0.322;QD=29.76;ReadPosRankSum=0.591;VQSLOD=4.2851;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,40:42:99:1278,111,0	1/1:1,11:12:36.10:407,36,0	0/0:11,0:10:22.51:0,23,184	0/0:13,0:11:21.01:0,21,192	1/1:11,24:36:95.46:1050,95,0	0/0:28,0:28:75.04:0,75,686	0/0:6,0:6:18.01:0,18,165	1/1:2,32:35:96.12:1087,96,0	1/1:5,22:27:72.20:821,72,0	1/1:1,28:29:84.25:969,84,0	1/1:1,26:27:72.21:831,72,0	0/0:9,0:9:27.01:0,27,247	0/0:9,0:9:24.01:0,24,220	0/0:6,0:6:12:0,12,110	1/1:0,17:17:51.15:589,51,0	1/1:0,12:12:36.11:416,36,0	1/1:1,19:20:54.16:623,54,0	1/1:5,10:15:30.09:346,30,0	1/1:9,13:24:44.96:496,45,0	1/1:2,25:27:75.18:848,75,0	1/1:1,5:7:20.88:210,21,0	0/0:23,0:23:66.03:0,66,603	0/0:25,0:25:69.04:0,69,631	0/0:15,0:15:42.02:0,42,384	1/1:2,23:25:60.18:693,60,0	1/1:11,21:32:81.24:933,81,0	1/1:8,33:41:99:1287,114,0	1/1:8,22:31:69.04:776,69,0
chr10	58115455	.	TA	T	11901.77	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=14.978;DP=594;FS=3.964;HRun=6;HaplotypeScore=91.9633;InbreedingCoeff=0.9996;MQ=84.12;MQ0=0;MQRankSum=-1.388;QD=28.96;ReadPosRankSum=2.152;VQSLOD=5.3804;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,21:25:60.15:645,60,0	1/1:0,13:13:39.10:419,39,0	0/0:20,0:20:42.21:0,42,648	0/0:15,0:16:44:0,44,480	1/1:3,34:37:99:1096,102,0	0/0:28,0:28:75.24:0,75,985	0/0:15,0:15:45.15:0,45,592	1/1:6,28:34:81.19:862,81,0	1/1:2,30:32:87.22:935,87,0	1/1:5,18:23:60.15:643,60,0	1/1:2,18:20:54.13:580,54,0	0/0:11,0:11:33.11:0,33,434	0/0:22,0:22:63.20:0,63,828	0/0:14,0:14:42.14:0,42,553	1/1:0,24:24:69.17:742,69,0	1/1:0,14:14:39.10:419,39,0	1/1:4,18:22:57.14:613,57,0	1/1:1,19:20:57.14:613,57,0	1/1:0,22:22:66.11:678,66,0	1/1:4,23:27:75.19:806,75,0	1/1:0,11:11:33.08:354,33,0	0/0:24,0:24:69.22:0,69,907	0/0:25,0:25:66.21:0,66,864	0/0:8,0:8:24.08:0,24,314	1/1:3,11:14:36.07:376,36,0	1/1:3,24:27:72.17:766,72,0	1/1:1,30:31:81.16:871,81,0	1/1:0,15:15:45.11:484,45,0
chr10	58115890	.	G	GTCC	24077.27	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=14.651;DP=645;FS=3.099;HRun=0;HaplotypeScore=119.6983;InbreedingCoeff=0.9995;MQ=90.48;MQ0=0;MQRankSum=-8.366;QD=57.19;ReadPosRankSum=3.459;VQSLOD=6.9336;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,53:58:99:3237,144,0	1/1:1,12:13:36.12:829,36,0	0/0:30,0:30:84.20:0,84,1278	0/0:29,0:28:69.24:0,69,1170	1/1:2,24:26:63.22:1452,63,0	0/0:22,0:22:63.17:0,63,973	0/0:28,0:28:84.22:0,84,1322	1/1:5,12:19:54.17:1151,54,0	1/1:1,26:29:63.22:1437,63,0	1/1:3,26:29:84.26:1880,84,0	1/1:1,14:15:39.13:898,39,0	0/0:25,0:25:75.24:0,75,1253	0/0:21,0:21:60.18:0,60,991	0/0:22,0:22:66.23:0,66,1125	1/1:2,20:22:57.20:1313,57,0	1/1:2,14:16:42.14:967,42,0	1/1:0,22:23:54.19:1244,54,0	1/1:1,7:8:24.08:553,24,0	1/1:3,18:23:63.08:1251,63,0	1/1:3,20:23:54.19:1232,54,0	1/1:2,27:30:57.20:1302,57,0	0/0:9,0:9:27.09:0,27,460	0/0:17,0:17:51.16:0,51,844	0/0:21,0:21:63.22:0,63,1073	1/1:1,13:14:33.11:761,33,0	1/1:1,26:27:81.28:1816,81,0	1/1:2,26:28:75.26:1716,75,0	1/1:0,17:18:45.15:1037,45,0
chr10	58116043	.	T	TG	10544.37	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=19.241;DP=624;FS=1.403;HRun=1;HaplotypeScore=144.9873;InbreedingCoeff=0.9885;MQ=84.10;MQ0=0;MQRankSum=-6.748;QD=26.97;ReadPosRankSum=0.603;VQSLOD=4.6989;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:37,9:46:99:1203,114,0	1/1:8,2:10:29.94:319,30,0	0/0:23,0:23:60.17:0,60,726	0/0:25,0:25:62.54:0,63,738	1/1:21,5:26:73.80:718,74,0	0/0:28,0:28:84.27:0,84,1090	0/0:25,0:25:72.20:0,72,906	1/1:0,24:24:68.54:499,69,0	1/1:17,4:21:30.99:479,31,0	1/1:19,12:31:88.95:1037,89,0	1/1:12,3:15:41.39:420,41,0	0/0:24,0:24:69.22:0,69,895	0/0:24,0:24:72.23:0,72,935	0/0:16,0:16:48.16:0,48,621	1/1:16,6:22:61.30:559,61,0	1/1:13,2:15:41.72:429,42,0	1/1:11,8:19:44.18:403,44,0	1/1:3,2:5:14.84:145,15,0	1/1:8,3:11:8.88:288,9,0	1/1:19,6:25:68.25:658,68,0	1/1:19,6:25:56.35:592,56,0	0/0:15,0:15:42.12:0,42,531	0/0:25,0:25:75.23:0,75,959	0/0:28,0:28:84.27:0,84,1090	1/1:17,6:23:68.29:667,68,0	1/1:23,7:30:83.95:988,84,0	1/1:21,6:27:71.14:715,71,0	1/1:11,5:16:44.69:426,45,0
chr10	58116046	.	AG	A	8474.44	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=19.662;DP=613;FS=3.704;HRun=2;HaplotypeScore=150.8316;InbreedingCoeff=0.9801;MQ=83.61;MQ0=0;MQRankSum=-8.338;QD=22.30;ReadPosRankSum=1.310;VQSLOD=4.8246;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:36,6:42:99:888,106,0	1/1:8,2:10:29.46:260,29,0	0/0:21,0:21:54.15:0,54,747	0/0:25,0:25:69.04:0,69,917	1/1:21,5:26:70.57:587,71,0	0/0:29,0:29:81.26:0,81,1193	0/0:26,0:26:78.25:0,78,1150	1/1:0,24:24:66.58:368,67,0	1/1:18,4:22:33.92:426,34,0	1/1:20,10:30:85.19:827,85,0	1/1:10,3:13:36.23:298,36,0	0/0:23,0:23:66.22:0,66,989	0/0:25,0:25:75.24:0,75,1102	0/0:16,0:16:48.16:0,48,719	1/1:14,6:20:53.19:412,53,0	1/1:12,2:14:40.71:369,41,0	1/1:11,8:19:44.49:338,44,0	1/1:3,2:5:14.23:115,14,0	1/1:7,4:11:5.54:268,6,0	1/1:19,6:25:68.49:561,68,0	1/1:19,5:24:58.04:545,58,0	0/0:15,0:15:42.14:0,42,629	0/0:25,0:25:75.24:0,75,1103	0/0:28,0:28:84.24:0,84,1234	1/1:16,6:22:63.12:537,63,0	1/1:22,6:28:76.92:738,77,0	1/1:24,4:28:68.53:568,69,0	1/1:12,5:17:46.13:371,46,0
chr10	58117523	.	T	TTA	13528.64	PASS	AB=0.591;AC=35;AF=0.625;AN=56;BaseQRankSum=13.964;DP=519;FS=0.000;HRun=0;HaplotypeScore=98.5668;InbreedingCoeff=0.8884;MQ=54.56;MQ0=1;MQRankSum=-1.497;QD=36.76;ReadPosRankSum=2.425;VQSLOD=7.1623;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,21:26:22.38:868,22,0	1/1:1,3:4:9.03:153,9,0	0/0:13,0:8:15.05:0,15,192	0/0:6,0:4:9.03:0,9,114	1/1:6,12:18:33.11:547,33,0	0/0:27,0:26:66.21:0,66,845	0/0:13,0:13:36.12:0,36,468	1/1:6,11:11:21.07:354,21,0	1/1:5,11:16:3.12:611,3,0	1/1:8,22:31:72.22:1169,72,0	1/1:6,21:27:27.21:1018,27,0	0/0:11,0:11:30.09:0,30,377	0/0:15,0:15:39.13:0,39,506	0/0:15,0:15:39.10:0,39,478	1/1:0,15:16:42.14:713,42,0	1/1:4,19:23:54.18:904,54,0	1/1:3,13:16:35.03:664,35,0	0/1:4,9:13:5.93:381,0,6	1/1:1,9:8:24.08:408,24,0	1/1:9,38:47:99:1771,105,0	1/1:3,10:12:21.07:357,21,0	0/0:19,0:19:51.14:0,51,634	0/0:22,0:22:60.19:0,60,780	0/0:10,0:10:24.08:0,24,310	1/1:4,20:24:54.18:917,54,0	1/1:3,21:24:66.13:1026,66,0	1/1:9,27:36:54.31:1465,54,0	1/1:1,6:7:12.04:204,12,0
chr10	58118126	.	GT	G	7102.08	PASS	AB=0.820;AC=36;AF=0.643;AN=56;BaseQRankSum=12.677;DP=500;FS=1.866;HRun=6;HaplotypeScore=63.3084;InbreedingCoeff=0.8781;MQ=50.00;MQ0=9;MQRankSum=-2.659;QD=19.89;ReadPosRankSum=1.088;VQSLOD=4.3804;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,16:18:8.65:444,9,0	1/1:0,11:10:15.04:161,15,0	0/0:20,0:8:21.05:0,21,256	0/1:12,0:4:0:0,0,0	1/1:1,30:31:84.17:890,84,0	0/0:25,0:25:69.22:0,69,908	0/0:8,0:8:24.06:0,24,300	1/1:7,16:21:51.11:539,51,0	1/1:4,18:19:30.06:313,30,0	1/1:6,24:30:54.12:573,54,0	1/1:3,20:20:45.10:474,45,0	0/0:20,0:20:57.19:0,57,750	0/0:12,0:12:36.11:0,36,460	0/0:18,0:18:45.14:0,45,579	1/1:3,9:11:24.04:249,24,0	1/1:3,14:14:27.05:281,27,0	1/1:2,15:17:31.39:456,31,0	0/1:7,9:16:67.50:225,0,67	1/1:1,6:7:21.04:218,21,0	1/1:5,23:23:54.12:571,54,0	1/1:2,6:8:18.04:187,18,0	0/0:16,0:16:48.14:0,48,617	0/0:18,0:18:51.17:0,51,671	0/0:6,0:6:15.05:0,15,197	1/1:2,13:12:27.07:290,27,0	1/1:3,19:18:36.08:374,36,0	1/1:4,28:29:57.12:600,57,0	1/1:2,11:11:24.06:258,24,0
chr10	58118159	.	CT	C	5101.04	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=9.446;DP=476;FS=3.543;HRun=8;HaplotypeScore=79.4762;InbreedingCoeff=0.9476;MQ=51.37;MQ0=1;MQRankSum=-4.929;QD=17.00;ReadPosRankSum=-3.815;VQSLOD=4.2329;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:28.40:0,28,555	1/1:3,11:13:24.02:225,24,0	0/0:10,0:9:18.99:0,19,155	0/0:7,0:7:16.59:0,17,174	0/0:32,0:32:93.29:0,93,1123	0/0:24,0:24:63.19:0,63,760	0/0:12,0:12:33.09:0,33,388	1/1:2,14:13:33.05:319,33,0	1/1:0,21:18:33.05:317,33,0	1/1:4,25:29:54.03:509,54,0	1/1:3,22:22:39.01:367,39,0	0/0:13,0:13:30.09:0,30,362	0/0:5,0:5:15.05:0,15,181	0/0:14,0:14:36.09:0,36,421	1/1:3,17:19:45:429,45,0	1/1:1,15:13:24.04:232,24,0	1/1:3,11:14:33.03:310,33,0	1/1:2,8:10:3.18:182,3,0	1/1:9,7:14:24.03:229,24,0	1/1:3,26:24:42.05:405,42,0	1/1:0,4:4:6.01:58,6,0	0/0:18,0:18:51.16:0,51,616	0/0:18,0:18:51.15:0,51,610	0/0:3,0:3:9.03:0,9,108	1/1:2,15:14:36.05:342,36,0	1/1:3,25:24:48.05:456,48,0	1/1:2,28:27:51.08:492,51,0	1/1:1,10:9:24.04:231,24,0
chr10	58119447	.	GTCCTGCGGT	G	164.65	PASS	AB=0.887;AC=5;AF=0.109;AN=46;BaseQRankSum=3.481;DP=240;FS=0.000;HRun=0;HaplotypeScore=60.4975;InbreedingCoeff=-0.0615;MQ=29.54;MQ0=46;MQRankSum=-1.198;QD=4.02;ReadPosRankSum=1.595;VQSLOD=1.1671;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:6:3.46:0,3,25	0/0:4,0:4:2.60:0,3,11	./.	./.	./.	0/0:12,0:8:21:0,21,397	0/0:14,0:12:24.05:0,24,747	0/0:6,0:5:8.58:0,9,59	0/1:7,1:8:49.45:49,0,137	0/0:7,0:5:3.89:0,4,28	0/0:2,0:2:0.47:0,0,1	0/0:18,0:14:21.07:0,21,772	0/0:15,0:14:21.07:0,21,635	0/0:10,0:9:12.04:0,12,354	0/1:4,1:5:32.66:33,0,58	0/0:6,0:6:14.97:0,15,201	0/1:15,0:13:24.91:25,0,133	0/1:8,0:8:7.68:8,0,227	0/0:4,0:2:0.89:0,1,2	./.	0/0:15,0:14:8.96:0,9,113	0/0:16,0:11:3.01:0,3,37	0/0:14,0:10:3.01:0,3,39	0/0:25,0:15:18.06:0,18,574	./.	0/0:3,0:2:2.74:0,3,12	0/0:8,1:8:9.50:0,9,153	0/1:3,2:5:13.44:155,0,13
chr10	58119477	.	AGAGT	A	1222.72	PASS	AC=16;AF=0.421;AN=38;BaseQRankSum=2.167;DP=210;FS=0.000;HRun=0;HaplotypeScore=34.7402;InbreedingCoeff=0.6566;MQ=23.68;MQ0=84;MQRankSum=0.691;QD=29.82;ReadPosRankSum=-0.989;VQSLOD=2.4972;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:3:3.01:0,3,81	0/0:2,0:2:6.02:0,6,161	./.	./.	0/0:4,0:4:3.01:0,3,81	0/0:13,0:5:6.02:0,6,161	0/0:13,0:8:9.03:0,9,201	./.	./.	1/1:0,10:9:24.08:454,24,0	1/1:0,5:5:6.02:96,6,0	0/0:18,0:12:21.07:0,21,564	0/0:14,0:10:18.02:0,18,375	0/0:11,0:10:6.02:0,6,161	./.	./.	./.	1/1:0,2:2:3.01:57,3,0	1/1:0,1:1:3.01:57,3,0	1/1:1,5:6:8.98:171,9,0	./.	0/0:18,0:13:18.06:0,18,484	0/0:15,0:8:3.01:0,3,80	0/0:20,0:9:6.02:0,6,161	1/1:1,3:4:9.03:170,9,0	1/1:1,6:7:9.01:138,9,0	./.	1/1:0,6:5:12.04:227,12,0
chr10	58121259	.	G	GA	154.39	PASS	AB=0.920;AC=7;AF=0.318;AN=22;BaseQRankSum=3.801;DP=277;FS=4.955;HRun=0;HaplotypeScore=25.4776;InbreedingCoeff=0.5630;MQ=20.99;MQ0=120;MQRankSum=-3.351;QD=3.09;ReadPosRankSum=0.013;VQSLOD=1.9474;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	./.	0/0:30,0:18:33.02:0,33,406	0/0:17,0:5:9.03:0,9,125	./.	./.	1/1:7,1:1:3.01:48,3,0	1/1:1,6:2:3.01:37,3,0	0/0:14,0:10:20.98:0,21,248	0/0:16,0:8:15.05:0,15,205	0/0:26,0:12:27.03:0,27,333	./.	./.	./.	./.	./.	1/1:6,6:3:9.03:143,9,0	./.	0/0:26,0:8:15.01:0,15,180	0/1:21,2:8:29.30:29,0,191	0/0:15,0:11:15.05:0,15,209	./.	./.	./.	./.
chr10	58121460	.	AC	A	1361.12	PASS	AB=0.790;AC=14;AF=0.467;AN=30;BaseQRankSum=8.922;DP=388;FS=116.866;HRun=1;HaplotypeScore=82.4280;InbreedingCoeff=0.2533;MQ=20.63;MQ0=147;MQRankSum=-1.355;QD=6.33;ReadPosRankSum=1.275;VQSLOD=0.2540;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:27,3:5:5.97:58,6,0	./.	./.	./.	./.	0/1:27,9:22:99:188,0,385	0/0:23,1:3:3.01:0,3,48	./.	0/0:3,0:1:3.01:0,3,48	0/0:2,1:1:3.01:0,3,30	./.	0/1:26,9:24:99:251,0,485	0/1:24,9:20:99:146,0,477	0/1:23,9:21:99:224,0,336	./.	./.	1/1:14,6:5:9.03:117,9,0	1/1:6,5:5:15.05:194,15,0	./.	./.	./.	0/0:30,0:25:39.13:0,39,620	0/0:25,0:21:36.12:0,36,573	0/0:30,0:10:9.03:0,9,143	./.	1/1:4,5:5:15.05:194,15,0	1/1:2,7:4:9.03:117,9,0	./.
chr10	58122551	.	T	TA	30.11	PASS	AC=4;AF=0.167;AN=24;BaseQRankSum=3.262;DP=106;FS=9.133;HRun=0;HaplotypeScore=40.2522;InbreedingCoeff=0.7233;MQ=86.75;MQ0=0;MQRankSum=-1.488;QD=4.30;ReadPosRankSum=2.006;VQSLOD=1.6898;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:16,0:12:26.56:0,27,336	0/0:16,0:9:17.93:0,18,223	1/1:0,4:3:6.02:79,6,0	0/0:4,0:4:12.03:0,12,151	0/0:4,0:4:12.04:0,12,168	./.	./.	./.	./.	0/0:8,0:7:15.02:0,15,175	0/0:4,0:4:12.04:0,12,168	0/0:11,0:11:30.08:0,30,386	./.	./.	./.	./.	./.	./.	./.	0/0:13,0:13:27.03:0,27,301	0/0:9,0:9:18.03:0,18,217	0/0:5,0:5:8.99:0,9,89	./.	./.	./.	1/1:0,3:1:3.01:40,3,0
chr10	58122580	.	TC	T	62.67	PASS	AC=6;AF=0.231;AN=26;BaseQRankSum=3.649;DP=102;FS=5.131;HRun=4;HaplotypeScore=39.4478;InbreedingCoeff=0.7136;MQ=74.00;MQ0=8;MQRankSum=-3.534;QD=6.27;ReadPosRankSum=1.178;VQSLOD=-0.0250;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:18,0:7:14.08:0,14,106	0/0:19,0:5:11.22:0,11,106	1/1:2,1:2:2.97:20,3,0	0/0:5,0:5:15.05:0,15,209	0/0:10,0:9:27.08:0,27,356	./.	./.	./.	./.	0/0:5,0:5:15.05:0,15,210	0/0:5,0:5:15.03:0,15,192	0/0:7,0:7:15.05:0,15,210	./.	./.	./.	./.	./.	./.	./.	0/0:8,0:8:21.07:0,21,292	0/0:2,0:2:6.02:0,6,84	0/0:5,0:5:12.04:0,12,168	./.	./.	1/1:0,4:3:9.03:108,9,0	1/1:0,3:1:3.01:36,3,0
chr10	58122592	.	CT	C	46.75	PASS	AC=2;AF=0.091;AN=22;BaseQRankSum=2.894;DP=106;FS=0.000;HRun=1;HaplotypeScore=32.0097;InbreedingCoeff=0.7742;MQ=56.46;MQ0=8;MQRankSum=-2.832;QD=11.69;ReadPosRankSum=1.170;VQSLOD=1.6008;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:15,0:5:14.95:0,15,144	0/0:15,0:2:6.02:0,6,93	./.	0/0:6,0:6:18.02:0,18,255	0/0:11,0:10:29.95:0,30,389	./.	./.	./.	./.	0/0:7,0:7:21.06:0,21,304	0/0:4,0:4:12.04:0,12,187	0/0:9,0:9:24.08:0,24,357	./.	./.	./.	./.	./.	./.	./.	0/0:8,0:8:21.07:0,21,327	0/0:7,0:7:21.05:0,21,301	0/0:8,0:8:21.06:0,21,306	./.	./.	1/1:0,4:3:9.03:125,9,0	./.
chr10	58122606	.	TCC	T	54.57	PASS	AC=4;AF=0.154;AN=26;BaseQRankSum=3.335;DP=120;FS=0.000;HRun=8;HaplotypeScore=36.1305;InbreedingCoeff=0.6921;MQ=64.23;MQ0=10;MQRankSum=-3.167;QD=10.91;ReadPosRankSum=0.920;VQSLOD=-0.5149;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:19,0:8:18.06:0,18,292	0/0:14,0:2:6.02:0,6,94	./.	0/0:5,0:5:15.05:0,15,254	0/0:14,0:13:39.12:0,39,633	./.	1/1:0,1:1:3.01:37,3,0	./.	./.	0/0:8,0:8:21.07:0,21,355	0/0:6,0:6:15.05:0,15,254	0/0:8,0:8:21.07:0,21,354	./.	./.	./.	./.	0/0:2,0:1:3.01:0,3,51	./.	./.	0/0:10,0:10:27.09:0,27,454	0/0:7,0:7:21.07:0,21,355	0/0:9,0:9:24.08:0,24,406	./.	./.	1/1:0,4:3:9.03:110,9,0	./.
chr10	58122629	.	CT	C	41.79	PASS	AC=4;AF=0.154;AN=26;BaseQRankSum=3.671;DP=138;FS=2.334;HRun=1;HaplotypeScore=35.4099;InbreedingCoeff=0.7393;MQ=62.88;MQ0=14;MQRankSum=-3.500;QD=6.97;ReadPosRankSum=0.911;VQSLOD=0.7063;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:21,0:9:20.19:0,20,277	0/0:15,0:4:12.03:0,12,148	./.	0/0:7,0:7:21.06:0,21,312	0/0:16,0:15:45.14:0,45,682	./.	1/1:1,1:1:3.01:33,3,0	./.	./.	0/0:10,0:10:30.10:0,30,479	0/0:7,0:7:21.07:0,21,335	0/0:10,0:10:27.06:0,27,405	./.	./.	./.	./.	0/0:3,0:1:3.01:0,3,44	./.	./.	0/0:9,0:9:21.07:0,21,333	0/0:8,0:8:21.07:0,21,333	0/0:15,0:15:39.09:0,39,594	./.	./.	1/1:1,3:3:9.02:100,9,0	./.
chr10	58124476	.	AT	A	2216.24	PASS	AC=36;AF=0.720;AN=50;BaseQRankSum=1.341;DP=359;FS=1.581;HRun=9;HaplotypeScore=21.8752;InbreedingCoeff=0.7549;MQ=25.82;MQ0=151;MQRankSum=-1.101;QD=9.31;ReadPosRankSum=1.411;VQSLOD=0.1776;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,0:5:10.19:30,10,0	1/1:1,6:5:6:55,6,0	./.	./.	1/1:1,0:5:4.26:13,4,0	0/0:10,0:10:15:0,15,158	0/0:9,0:4:12.04:0,12,138	1/1:4,11:6:18.01:165,18,0	1/1:2,13:11:18:165,18,0	1/1:5,13:8:18.01:165,18,0	1/1:0,10:7:9:82,9,0	0/0:10,0:6:6:0,6,58	0/0:12,0:5:12.04:0,12,137	0/0:8,0:7:3.01:0,3,35	1/1:0,10:8:12.01:110,12,0	1/1:0,13:9:24.01:219,24,0	1/1:3,10:7:12.01:110,12,0	1/1:0,5:4:8.96:74,9,0	1/1:1,14:9:20.78:183,21,0	1/1:2,10:7:15.01:137,15,0	1/1:1,6:4:9:82,9,0	./.	0/0:11,0:2:5.98:0,6,55	0/0:12,0:5:3.01:0,3,35	1/1:1,6:6:12.01:110,12,0	1/1:3,18:13:36.01:329,36,0	1/1:4,26:20:30.01:273,30,0	1/1:0,12:5:9:82,9,0
chr10	58125468	.	TTTG	T	1132.77	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.101;DP=425;FS=26.150;HRun=0;HaplotypeScore=64.4767;InbreedingCoeff=0.9329;MQ=73.93;MQ0=0;MQRankSum=-0.605;QD=23.60;ReadPosRankSum=0.979;VQSLOD=1.6932;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,19:26:48.16:716,48,0	0/0:6,0:6:18.06:0,18,377	0/0:18,0:17:42.01:0,42,795	0/0:11,0:11:9.05:0,9,266	1/1:3,19:22:41.92:538,42,0	0/0:18,0:18:48.15:0,48,964	0/0:10,0:10:27.09:0,27,566	0/0:30,0:30:72.23:0,72,1381	0/0:13,0:13:36.12:0,36,754	0/0:25,0:25:66.22:0,66,1331	0/0:13,0:13:33.11:0,33,680	0/0:7,0:7:15.05:0,15,314	0/0:6,0:6:15.05:0,15,314	0/0:9,0:9:24.08:0,24,488	0/0:14,0:14:33.11:0,33,667	0/0:6,0:6:12.04:0,12,251	0/0:16,0:16:43.35:0,43,840	0/0:15,0:15:39.13:0,39,804	0/0:23,0:23:60.19:0,60,1180	0/0:22,0:22:63.22:0,63,1320	0/0:10,0:10:30.09:0,30,590	0/0:19,0:19:51.17:0,51,1023	0/0:17,0:17:42.13:0,42,832	0/0:8,0:8:21.06:0,21,394	0/0:17,0:17:42.14:0,42,880	0/0:13,0:13:33.11:0,33,679	0/0:20,0:20:54.17:0,54,1061	0/0:11,0:11:27.09:0,27,548
chr10	58125513	.	C	CT	208.67	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-1.056;DP=475;FS=8.744;HRun=6;HaplotypeScore=60.5953;InbreedingCoeff=0.8560;MQ=71.42;MQ0=7;MQRankSum=-0.187;QD=23.19;ReadPosRankSum=-0.709;VQSLOD=2.4544;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:29:72.13:0,72,723	0/0:8,0:8:21.05:0,21,214	0/0:33,0:18:29.27:0,29,323	0/0:24,0:20:17.39:0,17,280	0/0:22,0:21:45.10:0,45,459	0/0:13,0:13:39.09:0,39,397	0/0:8,0:5:15.01:0,15,144	0/0:31,0:30:69.11:0,69,682	0/0:12,0:12:36.08:0,36,367	0/0:23,0:23:63.14:0,63,642	0/0:16,0:16:45.05:0,45,447	0/0:12,0:12:30.07:0,30,306	0/0:10,0:10:27.06:0,27,275	0/0:12,0:12:33.06:0,33,331	0/0:13,0:13:36.07:0,36,360	1/1:0,9:9:24.08:302,24,0	0/0:22,0:22:66.14:0,66,666	0/0:15,0:15:36.96:0,37,367	0/0:14,0:14:36.08:0,36,367	0/0:22,0:22:57.12:0,57,580	0/0:9,0:9:27.06:0,27,275	0/0:11,0:11:30.07:0,30,306	0/0:19,0:19:51.11:0,51,520	0/0:8,0:8:4.77:0,5,140	0/0:20,0:20:51.10:0,51,512	0/0:18,0:18:54.09:0,54,533	0/0:24,0:24:54.11:0,54,551	0/0:16,0:16:48.11:0,48,489
chr10	58125702	.	A	AGT	6080.95	PASS	AB=1.000;AC=37;AF=0.661;AN=56;BaseQRankSum=13.355;DP=345;FS=8.662;HRun=0;HaplotypeScore=63.5491;InbreedingCoeff=0.8713;MQ=51.14;MQ0=2;MQRankSum=-8.683;QD=29.96;ReadPosRankSum=3.405;VQSLOD=6.2882;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,12:12:21.07:302,21,0	1/1:0,3:3:9.03:134,9,0	0/1:16,0:7:19.56:20,0,273	0/0:19,0:12:33.09:0,33,469	1/1:2,12:13:24.08:354,24,0	0/0:11,0:11:27.09:0,27,440	0/0:18,0:18:51.17:0,51,829	1/1:1,4:4:9.03:130,9,0	1/1:2,14:16:42.14:618,42,0	1/1:1,16:17:51.06:722,51,0	1/1:1,5:6:15.05:222,15,0	0/0:15,0:15:36.12:0,36,587	0/0:15,0:15:36.02:0,36,556	0/0:14,0:14:33.11:0,33,538	1/1:0,6:4:12.04:189,12,0	1/1:1,4:4:9.03:141,9,0	1/1:1,15:14:27.98:396,28,0	1/1:2,3:5:9.03:142,9,0	1/1:2,3:5:12.02:196,12,0	1/1:0,13:12:33.11:480,33,0	1/1:3,12:13:21.07:316,21,0	0/0:12,0:12:36.12:0,36,585	0/0:14,0:14:39.13:0,39,635	0/0:24,0:24:69.24:0,69,1119	1/1:1,13:14:33.11:471,33,0	1/1:0,6:6:15.05:227,15,0	1/1:0,17:16:45.15:648,45,0	1/1:1,9:10:24.08:373,24,0
chr10	58125703	.	C	CT	4262.94	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=13.340;DP=362;FS=7.357;HRun=1;HaplotypeScore=68.9103;InbreedingCoeff=0.9679;MQ=50.62;MQ0=2;MQRankSum=-9.036;QD=21.21;ReadPosRankSum=2.550;VQSLOD=4.6760;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,12:12:26.93:225,27,0	1/1:0,3:3:9.01:87,9,0	0/0:16,0:7:18.06:0,18,234	0/0:19,0:12:33.08:0,33,399	1/1:2,12:13:20.96:175,21,0	0/0:11,0:11:27.09:0,27,350	0/0:19,0:19:54.10:0,54,653	1/1:2,4:5:15.02:155,15,0	1/1:3,14:17:44.84:403,45,0	1/1:1,16:17:47.86:441,48,0	1/1:2,5:7:15.01:143,15,0	0/0:15,0:15:39.09:0,39,488	0/0:15,0:15:36.04:0,36,452	0/0:15,0:15:36.10:0,36,452	1/1:2,6:6:15.02:150,15,0	1/1:0,4:3:9.02:94,9,0	1/1:1,15:14:26.68:251,27,0	1/1:3,3:5:15:156,15,0	1/1:2,3:5:14.97:151,15,0	1/1:2,13:14:35.76:308,36,0	1/1:4,12:14:30.03:297,30,0	0/0:12,0:12:36.12:0,36,467	0/0:15,0:15:42.12:0,42,529	0/0:24,0:24:69.18:0,69,876	1/1:2,13:15:33.01:297,33,0	1/1:3,6:9:24.05:246,24,0	1/1:2,17:18:48.03:440,48,0	1/1:1,9:10:24.05:246,24,0
chr10	58126736	.	A	AT	219.02	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=5.246;DP=528;FS=4.168;HRun=8;HaplotypeScore=65.2910;InbreedingCoeff=0.6673;MQ=62.40;MQ0=3;MQRankSum=1.217;QD=6.84;ReadPosRankSum=0.346;VQSLOD=0.5548;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,108,966	0/0:8,0:7:21.01:0,21,192	0/1:23,0:12:8.03:8,0,128	0/0:25,0:14:26.56:0,27,230	0/0:26,0:24:57.01:0,57,514	0/0:13,0:13:26.99:0,27,242	0/0:15,0:15:26.75:0,27,247	0/0:45,0:45:99:0,102,943	0/0:15,0:15:29.99:0,30,274	0/0:23,0:23:60.02:0,60,546	0/0:21,0:21:56.96:0,57,508	0/0:9,0:9:18:0,18,165	0/0:12,0:12:27.01:0,27,247	0/0:10,0:10:30.02:0,30,274	0/0:14,0:14:32.98:0,33,293	0/0:15,0:15:36.01:0,36,329	0/0:17,0:16:33.01:0,33,302	1/1:0,9:9:27.08:311,27,0	0/0:19,0:19:42.01:0,42,384	0/0:19,0:19:41.81:0,42,369	0/0:8,0:8:17.88:0,18,152	0/0:12,0:12:27.01:0,27,247	0/0:15,0:15:32.91:0,33,284	0/0:15,0:15:42.01:0,42,383	0/0:18,0:18:45.02:0,45,411	0/0:29,0:29:78:0,78,705	0/0:29,1:30:68.89:0,69,616	0/0:19,0:19:47.85:0,48,430
chr10	58128662	.	GTCAATCAA	G	8984.77	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=6.056;DP=498;FS=5.246;HRun=0;HaplotypeScore=139.7810;InbreedingCoeff=0.9542;MQ=66.85;MQ0=3;MQRankSum=-11.885;QD=39.58;ReadPosRankSum=0.971;VQSLOD=4.5918;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:18:48.14:0,48,1547	0/0:3,0:13:30.10:0,30,942	0/0:23,0:17:15.05:0,15,411	0/0:28,0:25:33.11:0,33,923	0/0:8,0:19:33.10:0,33,908	0/0:18,0:18:30.10:0,30,1243	0/0:12,0:12:15.05:0,15,615	0/0:27,0:26:33.11:0,33,885	1/1:7,14:21:39.13:991,39,0	1/1:7,7:14:21.07:497,21,0	1/1:5,12:17:21.07:427,21,0	0/0:21,0:21:57.20:0,57,2137	0/0:13,0:13:30.10:0,30,1110	0/0:5,0:5:9.03:0,9,373	1/1:4,21:25:51.18:1296,51,0	1/1:10,14:24:23.82:609,24,0	0/0:3,0:16:30.09:0,30,970	0/0:3,0:8:9.03:0,9,315	1/1:4,11:15:33.09:685,33,0	1/1:3,12:15:36.12:875,36,0	1/1:18,9:27:9.09:300,9,0	0/0:15,0:16:39.13:0,39,1536	0/0:19,0:19:51.18:0,51,1999	0/0:15,0:15:30.10:0,30,1147	1/1:4,9:14:21.07:513,21,0	1/1:4,18:22:54.15:1267,54,0	1/1:8,20:28:54.19:1372,54,0	1/1:3,2:5:6.02:152,6,0
chr10	58128854	.	CT	C	2525.05	PASS	AB=1.000;AC=28;AF=0.500;AN=56;BaseQRankSum=8.579;DP=314;FS=22.830;HRun=13;HaplotypeScore=49.7883;InbreedingCoeff=0.8535;MQ=73.22;MQ0=4;MQRankSum=-1.542;QD=14.35;ReadPosRankSum=3.696;VQSLOD=2.2294;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:34.89:0,35,203	0/0:3,0:3:8.59:0,9,44	0/1:10,0:9:4.08:4,0,26	0/1:10,0:8:0:0,0,0	0/0:18,0:17:43.34:0,43,235	0/0:5,0:8:14.70:0,15,116	0/0:5,0:5:6.01:0,6,58	0/0:20,0:18:25.34:0,25,127	1/1:1,4:6:13.96:93,14,0	1/1:5,10:14:29.57:217,30,0	1/1:3,10:13:32.79:239,33,0	0/0:5,0:5:9.01:0,9,88	0/0:5,0:5:9:0,9,82	0/0:2,0:2:4.25:0,4,32	1/1:1,9:10:26.84:197,27,0	1/1:1,6:7:17.86:131,18,0	0/0:12,0:12:29.15:0,29,171	1/1:1,11:12:16.29:202,16,0	1/1:2,10:12:26.83:196,27,0	1/1:4,12:16:35.71:262,36,0	1/1:2,4:6:14.86:107,15,0	0/0:15,2:18:18.45:0,18,314	0/0:15,0:17:32.71:0,33,285	0/0:10,0:10:24.03:0,24,228	1/1:1,17:18:50.67:372,51,0	1/1:1,13:14:38.72:283,39,0	1/1:2,6:8:20.83:151,21,0	1/1:4,15:18:38.68:284,39,0
chr10	58129278	.	GT	G	4969.74	PASS	AB=0.603;AC=31;AF=0.554;AN=56;BaseQRankSum=5.922;DP=585;FS=23.225;HRun=8;HaplotypeScore=53.0979;InbreedingCoeff=0.8075;MQ=43.72;MQ0=47;MQRankSum=1.696;QD=16.73;ReadPosRankSum=3.473;VQSLOD=3.3817;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:11,23:32:86.68:441,0,87	0/0:4,0:3:6.02:0,6,72	0/0:23,0:4:2.68:0,3,38	0/0:28,0:6:13.59:0,14,146	1/1:1,15:13:12.02:116,12,0	0/0:35,0:31:84.22:0,84,998	0/0:24,0:22:47.73:0,48,553	1/1:7,15:21:16.51:400,17,0	0/0:31,0:25:54.17:0,54,652	0/0:34,0:28:78.23:0,78,928	0/0:20,0:15:27.01:0,27,294	1/1:5,14:14:33.05:318,33,0	1/1:5,12:12:20.42:303,20,0	1/1:8,9:11:24.04:232,24,0	1/1:5,20:23:19.65:481,20,0	1/1:3,10:10:24.04:232,24,0	0/0:44,0:42:99:0,120,1448	0/0:20,0:18:51.12:0,51,591	1/1:6,15:16:45.07:435,45,0	1/1:0,15:15:36.06:347,36,0	1/1:2,22:22:66.11:637,66,0	1/1:3,6:5:9.01:87,9,0	1/1:1,6:4:6.01:58,6,0	1/1:1,6:7:3.48:130,3,0	0/0:18,0:16:33.10:0,33,398	1/1:5,14:15:42.07:406,42,0	1/1:5,17:17:36.06:348,36,0	0/0:3,3:1:2.92:0,3,17
chr10	58129457	.	A	AG	5033.52	PASS	AC=34;AF=0.944;AN=36;BaseQRankSum=-1.732;DP=231;FS=14.273;HRun=0;HaplotypeScore=27.3580;InbreedingCoeff=0.4733;MQ=28.80;MQ0=49;MQRankSum=-1.732;QD=25.04;ReadPosRankSum=0.631;VQSLOD=3.7625;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,14:11:12.04:190,12,0	./.	0/0:11,0:1:2.99:0,3,23	./.	./.	1/1:2,17:15:39.13:621,39,0	1/1:5,8:9:24.08:382,24,0	1/1:13,5:8:15.05:231,15,0	1/1:1,21:19:42.14:669,42,0	1/1:0,2:2:6.02:96,6,0	./.	1/1:1,11:9:21.07:334,21,0	1/1:1,5:4:12.04:191,12,0	1/1:1,10:11:27.09:430,27,0	1/1:2,10:10:30.10:478,30,0	1/1:2,10:11:27.09:430,27,0	1/1:7,8:6:15.05:239,15,0	1/1:4,5:3:9.03:144,9,0	1/1:4,4:4:12.03:169,12,0	./.	1/1:6,6:7:9.03:143,9,0	./.	./.	./.	./.	1/1:1,5:3:6.02:96,6,0	1/1:4,4:5:12.04:191,12,0	./.
chr10	58129677	.	TC	T	3639.57	PASS	AC=22;AF=0.917;AN=24;BaseQRankSum=-0.058;DP=646;FS=0.000;HRun=1;HaplotypeScore=69.5114;InbreedingCoeff=0.6382;MQ=11.85;MQ0=475;MQRankSum=-0.915;QD=12.91;ReadPosRankSum=1.615;VQSLOD=2.4087;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:51,2:2:6.02:83,6,0	1/1:6,6:5:15.05:209,15,0	./.	./.	1/1:12,15:12:27.09:375,27,0	./.	./.	./.	./.	1/1:9,13:12:30.09:411,30,0	1/1:8,14:11:24.08:333,24,0	./.	./.	./.	./.	./.	./.	./.	0/0:15,0:1:3.01:0,3,48	1/1:15,15:13:36.12:501,36,0	./.	1/1:13,17:15:39.04:517,39,0	1/1:8,10:9:15.05:208,15,0	./.	1/1:12,19:16:42.14:584,42,0	1/1:22,5:5:15.05:209,15,0	./.	1/1:4,5:5:15.05:209,15,0
chr10	58137638	.	AT	A	913.85	PASS	AC=6;AF=0.111;AN=54;BaseQRankSum=6.935;DP=468;FS=4.038;HRun=8;HaplotypeScore=70.5511;InbreedingCoeff=0.9653;MQ=66.58;MQ0=0;MQRankSum=-0.116;QD=19.44;ReadPosRankSum=-3.775;VQSLOD=2.5693;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:45.08:0,45,525	1/1:0,6:6:15.02:145,15,0	0/0:7,0:7:15.04:0,15,178	./.	0/0:22,0:22:63.19:0,63,761	0/0:21,0:21:57.17:0,57,679	0/0:5,0:5:15.05:0,15,181	1/1:7,20:27:60.05:562,60,0	0/0:20,0:20:57.17:0,57,689	0/0:40,0:40:99:0,111,1330	0/0:13,0:13:39.12:0,39,471	0/0:12,1:13:10.13:0,10,394	0/0:10,0:10:30.08:0,30,352	0/0:13,0:13:39.09:0,39,440	0/0:14,0:14:33.10:0,33,399	0/0:11,0:11:30.08:0,30,354	1/1:1,13:14:36.06:347,36,0	0/0:10,0:10:26.93:0,27,289	0/0:17,0:17:45.13:0,45,534	0/0:25,0:25:69.21:0,69,834	0/0:18,0:18:54.17:0,54,651	0/0:16,0:16:42.08:0,42,480	0/0:11,0:11:27.08:0,27,326	0/0:9,0:9:27.08:0,27,316	0/0:27,0:27:69.20:0,69,824	0/0:25,0:25:69.19:0,69,814	0/0:36,0:35:93.27:0,93,1101	0/0:17,0:17:51.16:0,51,616
chr10	58137770	.	G	GTATC	3851.13	PASS	AB=0.667;AC=17;AF=0.327;AN=52;BaseQRankSum=-3.521;DP=521;FS=22.111;HRun=0;HaplotypeScore=93.3217;InbreedingCoeff=0.8215;MQ=63.67;MQ0=0;MQRankSum=-0.522;QD=20.16;ReadPosRankSum=-1.018;VQSLOD=1.3135;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:18:9.40:143,9,0	0/1:2,2:4:37.01:131,0,37	./.	./.	1/1:27,0:39:14.08:213,14,0	0/0:12,0:12:18.04:0,18,253	1/1:6,3:10:6.02:140,6,0	0/0:20,0:20:0.47:0,0,1	1/1:7,12:19:30.10:701,30,0	0/0:26,0:26:47.17:0,47,651	0/0:26,0:26:42.11:0,42,600	0/0:15,0:15:21.07:0,21,322	0/0:15,0:15:21.07:0,21,321	0/0:16,0:16:27.09:0,27,411	0/0:13,0:13:24.08:0,24,366	0/0:16,0:16:33.11:0,33,507	1/1:8,11:19:10.19:677,10,0	0/0:25,0:25:25.40:0,25,534	0/0:14,0:14:9.03:0,9,138	1/1:15,0:34:30.10:521,30,0	0/0:9,0:9:15.05:0,15,225	0/0:15,0:15:9.03:0,9,138	0/0:20,0:20:27.09:0,27,414	0/0:14,0:14:21.05:0,21,300	1/1:12,9:22:24.08:561,24,0	0/0:35,0:35:39.12:0,39,577	1/1:9,16:26:33.11:765,33,0	0/0:20,0:19:21.07:0,21,322
chr10	58138374	.	G	GA	18666.52	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-13.269;DP=626;FS=0.657;HRun=0;HaplotypeScore=59.3647;InbreedingCoeff=0.9991;MQ=82.37;MQ0=0;MQRankSum=-3.346;QD=44.23;ReadPosRankSum=0.972;VQSLOD=5.1866;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,26:26:75.26:1199,75,0	1/1:0,10:10:20.72:334,21,0	0/0:27,0:27:60.32:0,60,859	0/0:11,0:11:27.08:0,27,345	1/1:0,43:43:99:1957,123,0	0/0:23,0:23:69.19:0,69,942	0/0:13,0:13:39.13:0,39,544	1/1:1,30:31:90.27:1371,90,0	1/1:0,16:16:45.15:719,45,0	1/1:0,27:27:81.27:1274,81,0	1/1:0,28:28:72.25:1144,72,0	0/0:14,0:14:42.14:0,42,587	0/0:26,0:26:75.25:0,75,1044	0/0:15,0:15:45.15:0,45,623	1/1:0,17:17:51.17:815,51,0	1/1:1,17:18:45.15:719,45,0	1/1:0,19:19:54.18:863,54,0	1/1:0,11:11:33.11:527,33,0	1/1:0,19:19:57.17:864,57,0	1/1:0,33:33:99:1559,99,0	1/1:1,22:23:60.20:959,60,0	0/0:28,0:28:84.28:0,84,1174	0/0:24,0:24:69.23:0,69,964	0/0:23,0:23:69.23:0,69,965	1/1:0,26:26:72.25:1148,72,0	1/1:0,27:27:78.27:1247,78,0	1/1:0,36:35:87.30:1390,87,0	1/1:0,12:12:36.12:575,36,0
chr10	58140153	.	GACTCTC	G	16414.32	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=16.003;DP=570;FS=1.973;HRun=0;HaplotypeScore=163.8010;InbreedingCoeff=0.9861;MQ=84.84;MQ0=0;MQRankSum=-16.830;QD=45.98;ReadPosRankSum=3.571;VQSLOD=5.1289;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,26:39:78.12:1546,78,0	1/1:0,5:5:15.05:339,15,0	0/0:23,0:23:59.61:0,60,1981	0/0:27,0:27:67.28:0,67,1945	1/1:2,24:26:33.11:716,33,0	0/0:26,0:26:78.27:0,78,2623	0/0:23,0:23:69.22:0,69,2315	1/1:10,15:25:39.05:751,39,0	1/1:6,11:17:39.13:798,39,0	1/1:4,21:25:69.24:1528,69,0	1/1:2,21:23:42.14:950,42,0	0/0:13,0:13:39.12:0,39,1289	0/0:21,0:21:60.21:0,60,2122	0/0:19,0:19:51.16:0,51,1735	1/1:1,21:22:57.15:1182,57,0	1/1:0,14:14:36.12:786,36,0	1/1:3,13:16:35.68:814,36,0	1/1:2,6:8:15.05:339,15,0	1/1:3,10:12:27.09:611,27,0	1/1:2,22:24:57.67:1260,58,0	1/1:3,13:16:9.03:204,9,0	0/0:20,0:20:57.17:0,57,1852	0/0:22,0:22:66.23:0,66,2307	0/0:19,0:19:54.19:0,54,1923	1/1:1,21:22:54.18:1221,54,0	1/1:4,24:28:72.22:1564,72,0	1/1:4,20:24:57.20:1261,57,0	1/1:0,8:8:24.08:543,24,0
chr10	58140251	.	CT	C	7112.94	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=13.506;DP=544;FS=1.206;HRun=10;HaplotypeScore=95.8808;InbreedingCoeff=0.9543;MQ=74.43;MQ0=1;MQRankSum=-2.509;QD=19.38;ReadPosRankSum=1.738;VQSLOD=5.3022;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,49:51:99:1146,132,0	1/1:2,0:6:8.15:24,8,0	0/0:20,2:20:6.51:0,7,255	0/0:18,0:17:15.08:0,15,155	1/1:4,20:24:62.98:547,63,0	0/0:26,0:26:72.19:0,72,796	0/0:20,2:22:28.09:0,28,538	1/1:7,0:20:25.38:74,25,0	1/1:1,22:23:59.99:521,60,0	1/1:1,25:26:71.97:625,72,0	1/1:4,20:24:56.97:495,57,0	0/0:14,1:15:16.06:0,16,405	0/0:18,1:19:48.12:0,48,522	0/0:8,0:8:21.06:0,21,232	1/1:5,11:16:35.96:309,36,0	1/1:5,13:18:41.99:364,42,0	1/1:0,0:25:42.78:126,43,0	1/1:1,13:14:35.99:313,36,0	1/1:5,17:22:31.13:397,31,0	1/1:2,17:20:53.03:449,53,0	1/1:0,10:10:23.99:208,24,0	0/0:13,0:13:30.05:0,30,315	0/0:22,0:22:60.14:0,60,649	0/0:12,0:12:36.10:0,36,398	1/1:1,16:17:47.99:417,48,0	1/1:0,18:18:50.98:443,51,0	1/1:0,28:29:70.86:605,71,0	1/1:2,2:4:6:52,6,0
chr10	58141820	.	GA	G	10280.68	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=13.007;DP=544;FS=10.786;HRun=7;HaplotypeScore=79.3616;InbreedingCoeff=0.9898;MQ=63.08;MQ0=1;MQRankSum=-0.123;QD=26.50;ReadPosRankSum=2.853;VQSLOD=5.1098;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,27:29:75.17:765,75,0	1/1:1,4:5:9.02:92,9,0	0/0:12,0:10:27.09:0,27,337	0/0:14,0:14:26.44:0,26,289	1/1:3,20:23:60.13:611,60,0	0/0:14,0:14:39.11:0,39,477	0/0:11,0:11:33.11:0,33,413	1/1:5,26:31:72.10:717,72,0	1/1:1,18:19:45.10:459,45,0	1/1:1,29:30:87.20:887,87,0	1/1:2,30:32:87.20:887,87,0	0/0:9,0:9:21.07:0,21,264	0/0:15,0:15:39.12:0,39,491	0/0:17,0:17:45.14:0,45,566	1/1:2,18:20:45.10:459,45,0	1/1:1,10:11:30.07:306,30,0	1/1:2,14:16:39.08:396,39,0	1/1:2,17:19:24.61:463,25,0	1/1:3,21:24:63.11:633,63,0	1/1:2,32:34:93.21:949,93,0	1/1:1,9:10:27.06:275,27,0	0/0:22,0:22:60.17:0,60,738	0/0:27,0:27:69.22:0,69,862	0/0:14,0:14:42.12:0,42,516	1/1:1,16:17:45.10:459,45,0	1/1:2,25:27:75.15:759,75,0	1/1:1,25:26:72.16:734,72,0	1/1:1,14:15:42.10:429,42,0
chr10	58142422	.	TG	T	7081.38	PASS	AC=34;AF=0.630;AN=54;BaseQRankSum=11.235;DP=454;FS=20.021;HRun=8;HaplotypeScore=57.6600;InbreedingCoeff=0.9657;MQ=55.83;MQ0=7;MQRankSum=0.794;QD=23.22;ReadPosRankSum=0.841;VQSLOD=3.3499;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,36:41:87.13:840,87,0	1/1:0,2:2:6.01:58,6,0	0/0:10,0:4:12.02:0,12,124	0/0:9,0:3:9.02:0,9,96	1/1:1,10:11:27.51:261,28,0	0/0:18,0:18:51.15:0,51,610	0/0:27,0:28:72.08:0,72,836	1/1:3,11:13:30.04:290,30,0	1/1:6,10:15:29.98:278,30,0	1/1:4,17:21:51.08:492,51,0	1/1:2,16:19:48.08:464,48,0	0/0:13,0:13:30.08:0,30,353	0/0:10,0:10:18.03:0,18,203	0/0:16,0:16:45.14:0,45,544	1/1:0,11:11:27.04:261,27,0	1/1:2,6:8:18.03:174,18,0	1/1:2,33:35:96.15:927,96,0	./.	1/1:4,11:13:30.04:289,30,0	1/1:0,20:20:51.08:493,51,0	1/1:3,17:20:42.07:406,42,0	0/0:7,0:7:21.06:0,21,253	0/0:20,0:20:59.82:0,60,666	0/0:18,0:18:51.16:0,51,616	1/1:2,16:18:48.08:464,48,0	1/1:1,24:25:72.10:690,72,0	1/1:1,20:21:54.09:521,54,0	1/1:1,6:7:18.02:174,18,0
chr10	58143105	.	T	TA	135.82	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=0.753;DP=525;FS=3.282;HRun=6;HaplotypeScore=84.7986;InbreedingCoeff=0.9740;MQ=65.96;MQ0=2;MQRankSum=-3.149;QD=22.64;ReadPosRankSum=-1.369;VQSLOD=2.3833;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:39:0,39,383	0/0:7,0:7:21.05:0,21,214	0/0:16,0:12:33.04:0,33,324	0/0:13,0:9:18.02:0,18,175	0/0:30,0:30:69.29:0,69,729	0/0:22,0:22:57.11:0,57,575	0/0:15,0:15:42.10:0,42,428	0/0:26,0:26:63.14:0,63,643	0/0:23,0:23:63.11:0,63,628	0/0:30,0:30:81.15:0,81,811	0/0:30,0:30:87.10:0,87,860	0/0:12,0:12:30.06:0,30,306	0/0:14,0:15:38.12:0,38,373	0/0:11,0:11:30.06:0,30,306	0/0:18,0:18:54.12:0,54,551	0/0:15,0:15:39.09:0,39,398	0/0:18,0:18:39.97:0,40,399	1/1:0,6:6:18.06:226,18,0	0/0:31,0:30:81.13:0,81,808	0/0:26,0:26:63.12:0,63,636	0/0:11,0:11:33.05:0,33,328	0/0:12,0:12:33.05:0,33,328	0/0:21,0:21:54.10:0,54,543	0/0:9,0:9:21.04:0,21,214	0/0:18,0:18:54.09:0,54,542	0/0:26,0:26:78.17:0,78,790	0/0:34,0:33:99:0,99,996	0/0:15,0:15:39.09:0,39,397
chr10	58143165	.	A	AT	822.87	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=7.550;DP=499;FS=62.657;HRun=0;HaplotypeScore=89.6673;InbreedingCoeff=0.9808;MQ=83.51;MQ0=0;MQRankSum=-9.707;QD=20.07;ReadPosRankSum=-1.008;VQSLOD=0.0257;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,7:7:20.69:161,21,0	1/1:0,4:4:11.71:69,12,0	0/0:22,0:22:54.39:0,54,844	0/0:15,0:15:34.23:0,34,412	1/1:0,11:11:22.55:156,23,0	0/0:23,0:23:69.21:0,69,919	0/0:12,0:12:36.08:0,36,452	1/1:0,13:13:39.13:502,39,0	0/0:23,0:23:66.22:0,66,922	0/0:28,0:28:81.23:0,81,1060	0/0:29,0:29:87.29:0,87,1216	0/0:14,0:14:39.13:0,39,544	0/0:20,0:20:60.20:0,60,839	0/0:9,0:9:27.09:0,27,378	0/0:15,0:15:39.13:0,39,545	0/0:12,0:12:33.11:0,33,461	1/1:0,6:6:17.63:107,18,0	0/0:11,0:11:12.13:0,12,398	0/0:19,0:19:57.18:0,57,766	0/0:38,0:38:99:0,111,1551	0/0:17,0:17:51.11:0,51,660	0/0:17,0:17:51.17:0,51,711	0/0:32,0:32:93.24:0,93,1231	0/0:9,0:9:27.08:0,27,361	0/0:18,0:18:54.17:0,54,740	0/0:24,0:24:72.23:0,72,978	0/0:36,0:35:99:0,108,1471	0/0:15,0:15:42.14:0,42,587
chr10	58143561	.	T	TA	16658.69	PASS	AC=38;AF=0.826;AN=46;BaseQRankSum=-8.709;DP=546;FS=8.314;HRun=4;HaplotypeScore=63.1634;InbreedingCoeff=0.9999;MQ=75.17;MQ0=0;MQRankSum=-6.258;QD=36.86;ReadPosRankSum=3.420;VQSLOD=4.8830;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:26,0:26:60.17:0,60,678	0/0:22,0:21:57.15:0,57,636	./.	1/1:0,35:35:96.32:1313,96,0	1/1:0,15:15:42.14:575,42,0	./.	1/1:0,18:18:54.18:738,54,0	1/1:4,27:31:78.26:1067,78,0	1/1:1,21:22:60.16:800,60,0	1/1:1,12:13:36.12:493,36,0	0/0:26,0:26:75.21:0,75,850	0/0:20,0:20:57.16:0,57,644	1/1:2,21:23:53.76:738,54,0	1/1:1,15:16:42.14:575,42,0	./.	1/1:0,21:21:54.18:738,54,0	1/1:0,22:22:60.20:821,60,0	1/1:1,42:43:99:1683,126,0	1/1:1,23:24:60.20:821,60,0	1/1:0,24:24:72.20:964,72,0	1/1:0,18:18:54.18:739,54,0	1/1:0,14:14:42.14:575,42,0	1/1:3,23:26:60.20:820,60,0	1/1:3,24:27:72.24:984,72,0	1/1:2,38:39:99:1477,108,0	1/1:0,20:20:54.18:739,54,0
chr10	58144209	.	GCA	G	10433.92	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=14.301;DP=586;FS=2.215;HRun=0;HaplotypeScore=70.4365;InbreedingCoeff=0.9991;MQ=77.16;MQ0=1;MQRankSum=-1.976;QD=37.26;ReadPosRankSum=2.605;VQSLOD=6.9628;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,33:33:78.26:1146,78,0	1/1:0,8:8:24.08:353,24,0	0/0:28,0:27:66.05:0,66,1086	0/0:21,0:21:43.73:0,44,891	1/1:0,25:25:66.22:970,66,0	1/1:0,22:21:48.16:706,48,0	1/1:1,16:17:48.11:681,48,0	1/1:1,32:33:96.21:1316,96,0	0/0:20,0:20:57.17:0,57,994	0/0:20,0:20:60.16:0,60,1072	0/0:21,0:21:63.22:0,63,1172	1/1:1,16:17:42.14:617,42,0	0/0:13,0:13:39.13:0,39,730	0/0:22,0:22:60.21:0,60,1123	0/0:22,0:22:66.21:0,66,1182	1/1:0,14:14:30.10:441,30,0	1/1:0,27:27:66.22:970,66,0	1/1:1,16:17:48.03:632,48,0	0/0:20,0:20:57.20:0,57,1068	0/0:25,0:25:75.26:0,75,1404	0/0:19,0:19:54.16:0,54,977	1/1:1,21:22:60.20:882,60,0	1/1:0,25:25:75.25:1102,75,0	1/1:0,20:20:42.14:617,42,0	0/0:15,0:15:45.15:0,45,832	0/0:22,0:22:66.21:0,66,1180	0/0:31,0:30:93.27:0,93,1642	0/0:7,0:7:21.07:0,21,393
chr10	58146096	.	GTGC	G	9680.44	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=16.173;DP=605;FS=5.473;HRun=0;HaplotypeScore=88.7703;InbreedingCoeff=0.9952;MQ=86.94;MQ0=0;MQRankSum=-4.139;QD=45.66;ReadPosRankSum=0.821;VQSLOD=6.7976;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:87.22:0,87,1818	1/1:0,5:5:12.04:205,12,0	0/0:26,0:26:78.27:0,78,1761	0/0:17,0:17:45.02:0,45,873	0/0:32,0:32:90.31:0,90,2030	1/1:1,20:21:57.20:971,57,0	1/1:1,20:21:54.18:919,54,0	1/1:1,30:31:90.28:1470,90,0	0/0:19,0:19:57.20:0,57,1314	0/0:25,0:25:69.24:0,69,1559	0/0:37,0:37:99:0,111,2457	1/1:0,16:16:39.13:664,39,0	0/0:14,0:14:42.14:0,42,945	0/0:14,0:14:42.11:0,42,876	0/0:18,0:18:51.18:0,51,1171	1/1:1,24:25:66.23:1125,66,0	1/1:0,16:16:45.15:766,45,0	1/1:0,9:9:24.08:409,24,0	0/0:20,0:20:57.20:0,57,1292	0/0:38,0:38:99:0,111,2510	0/0:14,0:14:42.14:0,42,968	1/1:1,24:25:69.19:1140,69,0	1/1:0,31:31:84.24:1398,84,0	1/1:0,12:12:36.12:613,36,0	0/0:14,0:14:39.13:0,39,899	0/0:23,0:23:66.22:0,66,1470	0/0:34,0:34:99:0,102,2307	0/0:16,0:16:48.16:0,48,1106
chr10	58147245	.	GA	G	1068.84	PASS	AB=0.835;AC=26;AF=0.464;AN=56;BaseQRankSum=5.236;DP=424;FS=6.929;HRun=14;HaplotypeScore=79.5246;InbreedingCoeff=0.3543;MQ=46.11;MQ0=21;MQRankSum=-9.209;QD=4.19;ReadPosRankSum=3.076;VQSLOD=1.3787;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:14,1:15:24:0,24,215	1/1:4,1:6:4.96:26,5,0	0/0:11,0:1:0.47:0,0,1	0/0:13,0:2:2.80:0,3,13	0/1:29,4:34:4.09:4,0,372	1/1:4,12:16:8.63:199,9,0	1/1:8,6:14:14.76:102,15,0	1/1:6,13:16:32.56:220,33,0	0/0:11,0:11:18.02:0,18,167	0/1:6,1:6:32.37:33,0,32	0/0:15,0:15:15.02:0,15,139	1/1:9,3:15:13.64:87,14,0	0/1:12,1:12:2.67:3,0,100	0/0:15,1:16:0.30:0,0,129	0/0:13,0:14:21.01:0,21,191	0/1:3,4:8:6.07:89,0,6	0/1:11,6:19:24.85:124,0,25	1/1:6,0:7:0.65:4,1,0	0/1:17,2:18:8.25:8,0,204	0/0:25,0:25:44.21:0,44,351	0/0:7,1:8:14.97:0,15,131	1/1:4,6:11:18.85:114,19,0	1/1:7,7:13:25.82:170,26,0	1/1:5,4:8:5.88:38,6,0	0/1:20,4:25:23.52:24,0,254	0/0:25,1:25:21.38:0,21,317	0/0:11,0:12:17.79:0,18,135	0/1:13,1:11:2.62:3,0,108
chr10	58147264	.	CAA	C	5481.22	PASS	AB=0.754;AC=47;AF=0.839;AN=56;BaseQRankSum=1.618;DP=452;FS=5.101;HRun=13;HaplotypeScore=83.7664;InbreedingCoeff=0.3782;MQ=53.37;MQ0=11;MQRankSum=1.279;QD=12.78;ReadPosRankSum=2.936;VQSLOD=4.0120;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,10:15:27.03:262,27,0	1/1:1,0:8:16.31:70,16,0	0/1:14,0:5:4.27:4,0,67	0/1:12,0:7:18.35:18,0,22	1/1:9,18:28:50.98:494,51,0	1/1:4,0:20:41.13:178,41,0	1/1:1,0:12:30.19:131,30,0	1/1:9,0:25:44.14:200,44,0	1/1:2,8:10:21:204,21,0	0/1:6,7:12:19.69:162,0,20	0/1:9,14:21:7.42:284,0,7	1/1:6,0:15:10.92:48,11,0	0/0:10,0:9:20.93:0,21,214	0/0:13,0:13:29.98:0,30,346	1/1:5,9:14:20.99:204,21,0	1/1:3,0:12:21.67:92,22,0	1/1:1,0:19:43.91:191,44,0	0/1:2,0:7:17.55:32,0,18	1/1:9,19:27:50.88:526,51,0	1/1:5,15:19:42:402,42,0	1/1:2,11:13:27.03:262,27,0	1/1:6,0:13:19.14:83,19,0	1/1:9,0:15:10.91:47,11,0	1/1:3,0:8:8.23:36,8,0	1/1:8,16:24:41.78:407,42,0	1/1:8,19:28:53.45:563,53,0	1/1:1,11:12:30.03:291,30,0	1/1:1,10:10:30.05:291,30,0
chr10	58147326	.	GTCTCTCTCTCTCTC	G	1366.73	PASS	AB=0.919;AC=17;AF=0.327;AN=52;BaseQRankSum=4.196;DP=517;FS=3.612;HRun=0;HaplotypeScore=178.6526;InbreedingCoeff=0.3187;MQ=68.26;MQ0=21;MQRankSum=-1.670;QD=8.65;ReadPosRankSum=-0.197;VQSLOD=2.1629;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:14:0.47:1,0,0	1/1:8,1:9:3.01:76,3,0	0/0:46,0:17:0:0,0,0	0/0:75,0:32:0.47:0,0,1	./.	0/1:12,0:13:10.12:105,0,10	0/0:14,0:14:0.47:0,0,1	./.	0/1:11,0:12:39.79:40,0,394	0/0:19,0:19:16.77:0,17,439	0/0:12,0:12:3.01:0,3,180	1/1:8,3:12:14.93:421,15,0	0/0:2,0:1:3.01:0,3,174	0/0:12,0:12:15.05:0,15,688	0/0:15,0:15:15.03:0,15,455	0/0:13,0:13:15.05:0,15,472	1/1:16,1:15:4.55:81,5,0	0/1:6,0:7:47.66:48,0,84	0/0:26,0:25:8.04:0,8,117	0/0:20,0:20:12.04:0,12,301	0/0:16,0:16:15.05:0,15,560	1/1:17,2:19:18.49:356,18,0	0/1:15,1:15:31.79:39,0,32	1/1:21,4:24:11.62:262,12,0	0/0:18,1:20:27.04:0,27,469	0/0:19,0:19:12.04:0,12,357	0/1:12,1:13:92.18:92,0,657	0/0:11,0:10:3.01:0,3,43
chr10	58147952	.	CAA	C	4225.11	PASS	AB=1.000;AC=27;AF=0.482;AN=56;BaseQRankSum=-3.364;DP=482;FS=0.000;HRun=13;HaplotypeScore=104.8025;InbreedingCoeff=0.8528;MQ=40.80;MQ0=29;MQRankSum=1.938;QD=15.59;ReadPosRankSum=6.337;VQSLOD=3.7266;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:13,14:23:16.23:274,16,0	0/0:5,0:5:3.46:0,3,24	0/0:9,0:2:5.98:0,6,55	0/1:12,0:4:0.75:1,0,58	1/1:10,8:18:26.56:230,27,0	0/0:16,0:14:26:0,26,205	0/0:14,0:11:15:0,15,171	0/0:29,0:27:37.02:0,37,246	1/1:10,10:20:13.72:297,14,0	1/1:3,11:15:32.77:302,33,0	1/1:5,18:22:57.05:548,57,0	0/0:13,0:14:18.78:0,19,179	0/0:10,0:14:37.06:0,37,403	0/0:11,0:10:27.09:0,27,383	1/1:6,10:15:20.62:278,21,0	0/0:15,0:15:18.10:0,18,186	0/0:25,0:19:25.19:0,25,216	0/0:7,0:5:3.89:0,4,31	1/1:8,8:14:30:289,30,0	1/1:9,15:20:32.75:301,33,0	1/1:4,2:6:2.97:29,3,0	0/0:18,0:18:17.66:0,18,138	0/0:25,0:25:29.46:0,29,216	0/0:8,0:6:6.45:0,6,60	1/1:7,8:15:17.97:224,18,0	1/1:13,17:31:18.37:501,18,0	1/1:6,25:32:80.63:741,81,0	1/1:4,7:11:23.81:211,24,0
chr10	58147965	.	AG	A	560.02	PASS	AB=0.974;AC=17;AF=0.304;AN=56;BaseQRankSum=2.700;DP=489;FS=4.681;HRun=1;HaplotypeScore=115.4545;InbreedingCoeff=-0.3470;MQ=50.67;MQ0=28;MQRankSum=-10.168;QD=1.77;ReadPosRankSum=1.887;VQSLOD=-0.7223;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:21:35.26:0,35,200	0/0:6,0:6:8.48:0,8,53	0/0:17,0:6:14.64:0,15,141	0/1:18,0:7:2.30:2,0,31	0/1:17,0:15:12.62:13,0,90	0/1:19,0:17:14.56:15,0,225	0/0:9,0:8:9.73:0,10,69	0/1:29,4:32:99:180,0,357	0/1:17,1:18:42.31:42,0,76	0/0:20,0:20:11.40:0,11,185	0/1:25,0:24:6.51:7,0,117	0/1:15,0:15:61.64:62,0,116	0/0:14,0:14:27.88:0,28,274	0/0:15,0:14:41.39:0,41,372	0/1:15,0:14:24.83:25,0,44	0/1:11,1:12:69.20:75,0,69	0/0:23,0:17:5.93:0,6,132	0/0:4,0:2:5.97:0,6,49	0/0:21,0:18:13.10:0,13,196	0/1:28,0:23:20.04:20,0,143	0/0:5,0:5:4.44:0,4,28	0/1:10,1:11:16.14:33,0,16	0/1:20,1:21:67.05:95,0,67	1/1:6,1:5:1.32:4,1,0	0/0:14,0:13:5.25:0,5,67	0/1:24,0:24:12.87:13,0,120	0/1:39,1:39:86.39:86,0,197	0/1:13,0:13:36.43:36,0,84
chr10	58147972	.	G	GA	6397.36	PASS	AB=0.617;AC=30;AF=0.536;AN=56;BaseQRankSum=-5.111;DP=549;FS=3.510;HRun=9;HaplotypeScore=110.9530;InbreedingCoeff=0.7644;MQ=56.65;MQ0=18;MQRankSum=0.761;QD=18.23;ReadPosRankSum=1.485;VQSLOD=4.4394;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:6,19:23:30.01:383,0,30	0/0:6,0:6:8.70:0,9,65	0/0:21,0:10:20.93:0,21,172	0/0:19,0:7:14.10:0,14,95	1/1:4,18:21:15.90:382,16,0	0/0:6,0:17:15.24:0,15,59	0/0:7,0:9:4.55:0,5,59	0/0:36,1:36:46.49:0,46,604	1/1:7,12:19:36.56:392,37,0	1/1:3,21:24:63.12:667,63,0	1/1:4,23:26:60.11:644,60,0	0/0:8,0:16:14.06:0,14,56	0/0:14,0:14:38.99:0,39,336	0/0:16,0:15:43.11:0,43,356	1/1:7,10:16:21.06:231,21,0	0/0:8,0:13:20.46:0,20,129	0/0:23,0:20:47.75:0,48,375	0/0:2,0:3:4.07:0,4,12	1/1:7,21:26:59.95:643,60,0	1/1:9,21:26:53.65:552,54,0	1/1:2,8:10:10.27:100,10,0	1/1:11,0:12:3.35:21,3,0	0/1:3,0:24:8.30:8,0,13	1/1:8,0:6:5.49:24,5,0	1/1:2,15:17:30.97:334,31,0	1/1:5,21:26:62.25:683,62,0	1/1:12,32:44:90.50:962,90,0	1/1:3,14:17:15.85:370,16,0
chr10	58147973	.	A	AAAGAAAAAG	3994.29	PASS	AB=0.982;AC=19;AF=0.339;AN=56;BaseQRankSum=-2.526;DP=556;FS=21.308;HRun=0;HaplotypeScore=200.0569;InbreedingCoeff=0.5910;MQ=57.75;MQ0=18;MQRankSum=-4.987;QD=20.59;ReadPosRankSum=-0.033;VQSLOD=1.3845;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:23:47.82:0,48,710	0/1:6,0:6:28.70:87,0,29	0/0:21,0:10:22:0,22,321	0/1:21,0:9:0.15:0,0,125	0/0:23,0:22:52.38:0,52,563	1/1:19,0:17:40.57:593,41,0	0/1:9,1:9:14.92:241,0,15	0/1:37,0:36:99:236,0,382	0/0:19,0:19:47.73:0,48,522	0/0:24,0:24:61.17:0,61,853	0/0:27,0:26:66.61:0,67,939	1/1:16,0:16:32.54:494,33,0	0/0:14,0:14:39.10:0,39,1015	0/0:16,0:15:45.07:0,45,1049	0/0:17,0:16:28.20:0,28,265	1/1:13,0:13:32.74:450,33,0	0/1:23,0:20:99:174,0,132	1/1:4,0:3:6:117,6,0	0/0:31,0:28:67.64:0,68,746	0/0:30,0:26:61.15:0,61,689	0/0:10,0:10:7.89:0,8,75	1/1:4,5:13:21:418,21,0	1/1:24,1:25:31.02:902,31,0	1/1:2,5:5:6.02:282,6,0	0/0:18,0:18:30.05:0,30,529	0/0:26,0:26:71.86:0,72,994	0/0:44,0:44:99:0,110,1441	0/0:17,0:17:41.33:0,41,679
chr10	58148531	.	A	ATGT	13500.68	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-0.755;DP=727;FS=9.679;HRun=0;HaplotypeScore=109.5867;InbreedingCoeff=0.9905;MQ=81.17;MQ0=0;MQRankSum=-5.443;QD=52.33;ReadPosRankSum=1.886;VQSLOD=6.5197;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,123,1960	1/1:1,6:7:18.06:408,18,0	0/0:34,0:34:85.52:0,86,1474	0/0:27,0:27:78.24:0,78,1235	0/0:29,0:29:75.21:0,75,1213	1/1:4,21:26:63.22:1414,63,0	1/1:4,10:15:33.11:736,33,0	1/1:6,33:39:99:2346,111,0	0/0:24,0:24:72.20:0,72,1166	0/0:23,0:23:66.23:0,66,1100	0/0:20,0:20:54.18:0,54,894	1/1:4,21:25:66.18:1432,66,0	0/0:31,0:31:87.24:0,87,1370	0/0:23,0:23:60.16:0,60,945	0/0:34,0:34:93.32:0,93,1549	1/1:1,24:25:57.20:1278,57,0	1/1:3,14:18:48.16:1076,48,0	1/1:1,12:15:12.57:659,13,0	0/0:23,0:23:63.21:0,63,1043	0/0:31,0:31:84.25:0,84,1326	0/0:38,0:38:99:0,105,1668	1/1:6,27:35:75.26:1696,75,0	1/1:2,24:26:57.20:1278,57,0	1/1:1,25:27:54.62:1177,55,0	0/0:29,0:29:87.30:0,87,1449	0/0:23,0:23:66.20:0,66,1029	0/0:32,0:32:96.31:0,96,1569	0/0:4,0:4:12.04:0,12,200
chr10	58149022	.	G	GT	10840.79	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-14.176;DP=712;FS=13.683;HRun=1;HaplotypeScore=71.0536;InbreedingCoeff=0.9917;MQ=79.27;MQ0=0;MQRankSum=-0.806;QD=39.42;ReadPosRankSum=1.586;VQSLOD=4.2767;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,99,1245	1/1:1,15:16:42.14:629,42,0	0/0:25,0:25:69.13:0,69,848	0/0:24,0:24:62.99:0,63,739	0/0:33,0:33:99:0,99,1242	1/1:1,32:33:84.24:1213,84,0	1/1:1,28:29:81.27:1214,81,0	1/1:2,28:30:84.23:1215,84,0	0/0:23,0:23:63.20:0,63,812	0/0:24,0:24:69.21:0,69,865	0/0:22,0:22:57.19:0,57,739	1/1:2,25:27:66.22:979,66,0	0/0:20,0:20:60.16:0,60,748	0/0:25,0:25:75.19:0,75,935	0/0:25,0:25:75.20:0,75,944	1/1:0,23:23:66.22:988,66,0	1/1:0,32:32:84.28:1259,84,0	1/1:0,20:20:57.19:854,57,0	0/0:23,0:23:60.19:0,60,779	0/0:25,0:25:75.19:0,75,952	0/0:33,0:33:96.31:0,96,1246	1/1:1,17:18:45.15:673,45,0	1/1:1,19:20:54.14:783,54,0	1/1:0,27:27:69.23:1034,69,0	0/0:39,0:39:99:0,111,1426	0/0:25,0:25:75.24:0,75,961	0/0:31,0:31:87.28:0,87,1124	0/0:6,0:6:9.03:0,9,117
chr10	58149601	.	GTGTGTGTGTGTGTGTGTATGTGTGTGTGTGTGCGCT	G	1399.91	PASS	AB=0.791;AC=4;AF=0.071;AN=56;BaseQRankSum=-1.652;DP=821;FS=5.468;HRun=0;HaplotypeScore=523.2322;InbreedingCoeff=-0.0408;MQ=48.47;MQ0=19;MQRankSum=-3.693;QD=17.50;ReadPosRankSum=-0.721;VQSLOD=0.0579;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:39:54.02:0,54,2945	0/1:4,10:14:99:1046,0,108	0/0:82,0:14:25.64:0,26,830	0/0:83,0:22:45.09:0,45,1158	0/0:27,0:27:32.57:0,33,1832	0/0:25,0:25:51.04:0,51,2023	0/0:29,0:28:44.95:0,45,1335	0/1:16,0:14:41.98:423,0,42	0/0:20,0:20:29.89:0,30,1047	0/0:31,0:31:69.22:0,69,4300	0/0:18,0:18:33.11:0,33,2034	0/0:21,0:21:33:0,33,1500	0/0:21,0:21:42.10:0,42,3265	0/0:24,0:24:51.14:0,51,2712	0/0:25,0:25:48.16:0,48,3387	0/0:23,0:22:23.96:0,24,719	0/1:9,23:31:12.80:31,0,13	0/1:18,0:17:1.33:1,0,1123	0/0:11,0:9:18.06:0,18,648	0/0:20,0:20:37.37:0,37,2625	0/0:84,0:83:99:0,119,7167	0/0:27,0:27:36.71:0,37,1298	0/0:22,0:22:37.34:0,37,2026	0/0:44,0:43:45.11:0,45,2546	0/0:21,0:21:45.15:0,45,3002	0/0:25,0:25:62.02:0,62,3489	0/0:10,0:9:27.09:0,27,2243	0/0:9,0:9:21.07:0,21,932
chr10	58149611	.	G	GCTCT	580.35	PASS	AB=0.889;AC=3;AF=0.054;AN=56;BaseQRankSum=1.761;DP=815;FS=1.151;HRun=0;HaplotypeScore=200.9463;InbreedingCoeff=-0.0527;MQ=49.24;MQ0=27;MQRankSum=-4.365;QD=13.19;ReadPosRankSum=-0.812;VQSLOD=3.1944;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:36:63.63:0,64,1113	0/1:11,0:11:47.40:298,0,47	0/0:81,0:11:24.97:0,25,478	0/0:88,0:23:60.29:0,60,1112	0/0:28,0:28:29.26:0,29,473	0/0:27,0:27:47.23:0,47,877	0/0:28,0:27:35.86:0,36,740	0/1:4,4:6:28.21:351,0,28	0/0:18,0:18:30.10:0,30,562	0/0:29,0:29:81.23:0,81,1579	0/0:19,0:19:42.14:0,42,831	0/0:22,0:22:36.12:0,36,724	0/0:18,0:18:45.11:0,45,899	0/0:24,0:24:57.16:0,57,1090	0/0:20,0:20:48.16:0,48,968	0/0:24,0:23:24.08:0,24,491	0/1:25,0:24:23.04:31,0,23	0/0:20,0:19:48.16:0,48,943	0/0:13,0:11:24.04:0,24,424	0/0:21,0:21:39.13:0,39,791	0/0:90,0:89:99:0,117,2363	0/0:24,0:24:32.88:0,33,689	0/0:24,0:24:41.33:0,41,783	0/0:48,0:47:50.50:0,50,1016	0/0:25,0:25:45.15:0,45,881	0/0:23,0:23:63.22:0,63,1280	0/0:9,0:8:27.09:0,27,546	0/0:11,0:10:21.07:0,21,401
chr10	58149617	.	GTA	G	3453.39	PASS	AB=0.983;AC=35;AF=0.625;AN=56;BaseQRankSum=-6.227;DP=792;FS=10.447;HRun=0;HaplotypeScore=168.2388;InbreedingCoeff=0.0377;MQ=49.12;MQ0=25;MQRankSum=0.345;QD=5.12;ReadPosRankSum=-7.922;VQSLOD=-0.6480;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:36,0:35:54.37:456,54,0	1/1:11,0:11:14.88:111,15,0	0/0:67,0:9:20.67:0,21,195	0/1:85,0:20:4.85:5,0,133	1/1:28,0:28:29.85:232,30,0	1/1:26,0:26:17.28:176,17,0	1/1:28,0:27:26.60:214,27,0	1/1:7,0:5:14.12:79,14,0	0/1:16,1:17:15.95:68,0,16	0/1:26,0:26:37.52:245,0,38	0/1:18,1:19:7.27:112,0,7	0/1:23,0:23:8.28:69,0,8	0/0:16,0:16:36.06:0,36,556	0/0:24,0:24:14.34:0,14,479	0/1:19,0:19:53.95:62,0,54	1/1:23,0:22:22.65:127,23,0	1/1:25,0:24:2.99:23,3,0	0/1:18,0:17:2.54:118,0,3	0/1:13,0:11:4.51:94,0,5	0/1:21,0:21:16.26:69,0,16	0/1:90,3:92:17.40:281,0,17	1/1:26,0:26:7.92:154,8,0	1/1:22,0:22:11.47:132,11,0	1/1:48,0:47:32.15:244,32,0	0/1:26,1:27:29.05:82,0,29	0/1:22,1:23:17.76:251,0,18	0/1:9,0:8:34.26:48,0,34	0/0:11,0:10:8.57:0,9,29
chr10	58149632	.	T	TGC	4114.48	PASS	AB=0.574;AC=27;AF=0.500;AN=54;BaseQRankSum=-2.410;DP=717;FS=3.278;HRun=0;HaplotypeScore=160.2991;InbreedingCoeff=0.8933;MQ=51.44;MQ0=19;MQRankSum=3.255;QD=12.25;ReadPosRankSum=3.828;VQSLOD=3.3105;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:39,0:38:49.08:392,49,0	1/1:10,0:10:3.49:8,3,0	0/0:51,0:15:27.02:0,27,291	0/0:64,0:14:29.83:0,30,361	1/1:24,0:24:21.16:100,21,0	0/0:23,0:23:24.05:0,24,213	0/0:25,0:24:34.36:0,34,250	0/0:6,0:5:11.37:0,11,61	1/1:5,10:15:5.32:105,5,0	1/1:5,18:24:45.83:497,46,0	1/1:18,1:19:35.07:367,35,0	0/0:23,0:24:25.80:0,26,185	0/0:17,0:17:42.02:0,42,475	0/0:20,0:20:48.11:0,48,614	1/1:13,5:18:32.88:464,33,0	0/0:19,0:19:20.16:0,20,131	./.	0/0:18,0:17:33.93:0,34,204	1/1:10,2:11:17.63:144,18,0	1/1:6,13:20:10.19:301,10,0	1/1:16,67:87:41.33:615,41,0	0/0:20,0:20:20.71:0,21,152	0/0:22,0:22:27.38:0,27,193	0/0:48,0:46:56.13:0,56,436	0/1:7,20:27:0.73:296,0,1	1/1:5,19:24:48.62:464,49,0	1/1:6,2:7:8.45:150,8,0	1/1:1,8:8:12.04:212,12,0
chr10	58149633	.	GCGCT	G	782.76	PASS	AB=0.946;AC=11;AF=0.204;AN=54;BaseQRankSum=1.384;DP=697;FS=25.276;HRun=0;HaplotypeScore=173.5782;InbreedingCoeff=0.1733;MQ=52.03;MQ0=19;MQRankSum=-5.410;QD=4.25;ReadPosRankSum=-1.358;VQSLOD=1.1152;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:39,1:39:76.97:0,77,1442	1/1:10,0:10:11.92:99,12,0	0/0:50,0:15:31.80:0,32,775	0/0:59,1:13:31.79:0,32,764	0/0:25,0:25:32.99:0,33,520	0/1:22,0:22:59.63:60,0,521	0/1:19,0:19:49.86:50,0,592	1/1:1,5:5:15.05:261,15,0	0/0:13,1:14:8.03:0,8,204	0/0:23,0:23:61.43:0,61,1237	0/0:18,0:18:44.97:0,45,857	0/1:22,2:24:25.40:25,0,462	0/0:16,1:17:44.89:0,45,1108	0/0:20,0:20:51.13:0,51,1335	0/0:19,0:19:54.19:0,54,1182	0/1:15,4:18:60.28:60,0,240	./.	0/1:16,1:16:90.40:90,0,404	0/0:11,0:10:22.68:0,23,429	0/0:20,0:20:33.04:0,33,536	0/0:86,0:86:65.20:0,65,1366	0/1:20,0:20:99:106,0,195	0/0:19,1:20:25.29:0,25,503	0/1:45,1:44:99:187,0,831	0/0:26,0:26:32.87:0,33,649	0/0:24,0:24:64.96:0,65,1368	0/0:8,0:7:24.08:0,24,592	0/0:9,0:8:11.99:0,12,194
chr10	58149635	.	GCT	G	508.30	PASS	AB=0.917;AC=11;AF=0.204;AN=54;BaseQRankSum=2.473;DP=690;FS=24.467;HRun=0;HaplotypeScore=160.6665;InbreedingCoeff=0.1866;MQ=52.41;MQ0=18;MQRankSum=-4.201;QD=2.78;ReadPosRankSum=-0.700;VQSLOD=1.1852;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:39:88.65:0,89,1060	1/1:10,0:10:11.98:100,12,0	0/0:49,0:17:33.67:0,34,574	0/0:52,0:12:33.06:0,33,541	0/0:27,0:27:55.06:0,55,522	0/1:18,2:21:43.42:43,0,201	0/1:21,0:20:31.13:31,0,369	1/1:6,0:5:15.03:172,15,0	0/0:14,0:14:9:0,9,128	0/0:25,0:25:62.36:0,62,816	0/0:18,0:18:40.92:0,41,519	0/1:22,1:23:4.65:5,0,173	0/0:17,0:17:44.93:0,45,768	0/0:21,0:21:54.13:0,54,958	0/0:19,0:19:54.14:0,54,743	0/1:17,2:18:38.87:39,0,113	./.	0/1:14,2:15:89.71:90,0,159	0/0:11,0:10:26.90:0,27,329	0/0:18,0:18:14.28:0,14,252	0/0:84,0:84:67.90:0,68,865	0/1:16,4:20:84.03:84,0,88	0/0:20,1:21:26.79:0,27,220	0/1:45,2:45:96.80:97,0,398	0/0:25,0:25:27.08:0,27,378	0/0:24,0:24:68.69:0,69,907	0/0:8,0:7:24.08:0,24,389	0/0:9,0:8:10.58:0,11,102
chr10	58149701	.	A	ATG	5220.99	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-5.132;DP=734;FS=8.312;HRun=0;HaplotypeScore=148.7378;InbreedingCoeff=0.9962;MQ=54.52;MQ0=15;MQRankSum=1.667;QD=26.91;ReadPosRankSum=3.916;VQSLOD=5.7770;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:69.22:0,69,868	0/0:12,0:11:24.05:0,24,274	0/0:57,0:23:44.91:0,45,506	0/0:44,0:26:56.60:0,57,634	0/0:27,0:27:38.58:0,39,502	1/1:4,16:20:30.10:502,30,0	1/1:9,14:22:24.07:392,24,0	0/0:26,0:26:60.11:0,60,747	0/0:20,0:20:36.17:0,36,479	0/0:15,0:15:35.94:0,36,432	0/0:15,0:15:36.12:0,36,470	1/1:6,21:27:51.13:845,51,0	0/0:27,0:27:69.10:0,69,873	0/0:27,0:27:66.21:0,66,844	0/0:15,0:15:39.13:0,39,509	1/1:2,13:15:24.08:380,24,0	0/0:25,0:25:45.13:0,45,557	1/1:7,19:26:54.18:865,54,0	0/0:20,0:14:29.71:0,30,331	0/0:17,0:17:33.11:0,33,424	0/0:72,0:71:99:0,120,1536	1/1:2,17:19:39.13:652,39,0	1/1:4,10:14:23.64:396,24,0	1/1:13,37:49:55.17:1189,55,0	0/0:25,0:25:17.98:0,18,231	0/0:26,0:25:68.89:0,69,856	0/0:22,0:22:64.75:0,65,819	0/0:9,0:9:21.06:0,21,257
chr10	58149737	.	ATGTGTG	A	5388.96	PASS	AB=0.843;AC=35;AF=0.673;AN=52;BaseQRankSum=-0.056;DP=568;FS=39.125;HRun=0;HaplotypeScore=148.3462;InbreedingCoeff=0.4434;MQ=49.58;MQ0=17;MQRankSum=2.326;QD=14.03;ReadPosRankSum=1.497;VQSLOD=2.3217;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:15,0:24:43.09:43,0,44	0/0:15,0:14:21.06:0,21,455	./.	./.	0/0:9,0:17:1.41:0,1,2	1/1:18,0:18:20.91:367,21,0	1/1:13,3:15:12.04:240,12,0	0/0:23,0:20:27.08:0,27,477	1/1:13,0:14:17.97:274,18,0	1/1:11,1:11:20.94:376,21,0	1/1:11,0:11:6.02:108,6,0	1/1:16,0:17:10.85:190,11,0	0/0:18,0:18:32.96:0,33,536	0/0:23,0:23:18.53:0,19,368	1/1:12,2:14:18.06:310,18,0	0/1:13,0:14:1.30:109,0,1	0/0:24,0:23:35.56:0,36,556	0/1:21,0:23:48.51:134,0,49	1/1:17,1:14:9.03:174,9,0	0/1:7,7:13:30.58:31,0,68	1/1:43,1:42:0.83:323,1,0	1/1:22,1:22:26.70:433,27,0	1/1:10,1:11:11.88:232,12,0	0/1:31,0:31:38.16:497,0,38	1/1:16,0:16:2.70:28,3,0	1/1:9,11:19:33.11:589,33,0	1/1:28,0:29:15.35:752,15,0	1/1:8,1:10:8.74:178,9,0
chr10	58150851	.	T	TATC	7634.73	PASS	AB=0.959;AC=28;AF=0.500;AN=56;BaseQRankSum=11.237;DP=733;FS=15.290;HRun=0;HaplotypeScore=211.3899;InbreedingCoeff=-0.6136;MQ=53.36;MQ0=18;MQRankSum=0.719;QD=11.43;ReadPosRankSum=5.612;VQSLOD=2.8398;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:14:3.01:42,3,0	1/1:13,0:13:9.03:126,9,0	0/0:23,0:4:9.03:0,9,131	0/1:21,0:7:18.20:18,0,20	0/1:35,0:35:99:408,0,184	0/1:32,0:32:99:169,0,116	0/1:11,0:11:20.92:271,0,21	0/1:40,0:39:99:797,0,543	0/1:37,0:37:58.46:371,0,58	0/1:43,0:44:99:1002,0,588	0/1:28,0:28:59.82:343,0,60	0/1:27,0:27:99:421,0,121	0/0:21,0:21:60.18:0,60,916	0/0:21,0:21:63.21:0,63,1016	0/1:32,0:32:68.57:69,0,123	0/1:24,0:24:68.92:188,0,69	0/1:19,0:19:99:250,0,108	0/1:8,6:14:99:166,0,201	0/1:19,0:18:99:294,0,189	0/1:40,0:40:99:534,0,209	0/1:8,10:18:4.35:62,0,4	1/1:33,0:33:3.01:42,3,0	0/1:26,11:37:48.22:48,0,146	0/1:16,0:16:29.85:30,0,105	0/1:30,0:30:67.70:254,0,68	0/1:27,0:27:99:666,0,293	0/1:36,0:36:99:543,0,298	0/1:21,0:20:99:523,0,130
chr10	58150854	.	CT	C	6136.53	PASS	AB=0.731;AC=23;AF=0.411;AN=56;BaseQRankSum=7.813;DP=727;FS=7.384;HRun=1;HaplotypeScore=196.0660;InbreedingCoeff=-0.5476;MQ=50.95;MQ0=18;MQRankSum=3.086;QD=10.67;ReadPosRankSum=2.379;VQSLOD=2.9604;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:14,0:15:1.39:1,0,46	1/1:5,8:13:9.03:126,9,0	0/0:22,0:3:9.03:0,9,131	0/1:19,0:5:17.70:18,0,39	0/1:16,19:35:99:336,0,443	0/1:13,19:32:99:142,0,162	0/1:4,7:11:62.73:267,0,63	0/1:25,20:44:99:693,0,869	0/1:14,24:38:98.48:322,0,98	0/1:21,22:43:99:750,0,792	0/1:12,16:28:99:335,0,170	0/1:12,16:28:99:366,0,220	0/0:21,0:21:63.20:0,63,959	0/0:21,0:21:63.21:0,63,999	0/0:31,0:31:17.32:0,17,200	0/0:24,0:24:22.26:0,22,188	0/1:9,10:19:99:183,0,156	0/1:10,2:12:80.17:80,0,207	0/1:17,0:17:99:236,0,292	0/1:22,17:39:99:515,0,373	0/1:15,1:16:11.18:11,0,82	0/0:33,0:33:7.64:0,8,58	0/1:24,11:35:22.18:22,0,216	0/1:10,4:14:29.83:30,0,128	0/1:15,15:30:67.88:208,0,68	0/1:12,15:27:99:546,0,435	0/1:16,19:35:99:467,0,471	0/1:9,14:22:99:484,0,252
chr10	58151371	.	CA	C	3664.93	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=12.398;DP=555;FS=1.219;HRun=7;HaplotypeScore=55.5538;InbreedingCoeff=0.9590;MQ=72.93;MQ0=0;MQRankSum=-1.653;QD=25.81;ReadPosRankSum=1.981;VQSLOD=4.3640;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:36.12:0,36,453	0/0:10,0:10:30.10:0,30,377	0/0:17,0:14:29.52:0,30,311	0/0:18,0:14:7.23:0,7,265	0/0:31,0:31:84.26:0,84,1043	1/1:4,24:28:66.15:673,66,0	1/1:0,10:10:27.06:276,27,0	0/0:34,0:34:81.25:0,81,998	0/0:17,0:17:51.16:0,51,641	0/0:21,0:21:54.16:0,54,656	0/0:33,0:33:90.25:0,90,1095	1/1:1,15:16:45.10:459,45,0	0/0:17,0:17:48.15:0,48,604	0/0:18,0:18:42.28:0,42,549	0/0:12,0:12:33.11:0,33,415	1/1:1,15:16:4.35:360,4,0	0/0:25,0:25:66.21:0,66,827	1/1:2,13:15:39.09:397,39,0	0/0:22,0:22:63.19:0,63,773	0/0:31,0:31:90.25:0,90,1094	0/0:11,0:11:33.10:0,33,403	1/1:1,22:23:57.12:582,57,0	1/1:1,24:25:66.15:673,66,0	1/1:1,8:9:24.05:245,24,0	0/0:22,0:22:63.20:0,63,793	0/0:27,0:27:81.25:0,81,1006	0/0:27,0:27:75.24:0,75,943	0/0:6,0:6:15.05:0,15,189
chr10	58152860	.	C	CT	1462.58	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-9.930;DP=323;FS=0.666;HRun=8;HaplotypeScore=30.4191;InbreedingCoeff=0.9276;MQ=67.37;MQ0=1;MQRankSum=-0.538;QD=24.38;ReadPosRankSum=-0.149;VQSLOD=3.4084;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:30:0,30,270	0/0:5,0:5:14.98:0,15,131	0/0:10,0:9:21.01:0,21,192	0/0:6,0:3:8.37:0,8,63	0/0:28,0:28:69.01:0,69,627	1/1:1,12:13:33.10:381,33,0	1/1:1,5:6:15.04:173,15,0	0/0:18,0:18:42:0,42,381	0/0:11,0:11:27.01:0,27,247	0/0:8,0:8:12:0,12,110	0/0:14,0:14:33.01:0,33,302	1/1:0,5:5:15.04:173,15,0	0/0:9,0:9:24.01:0,24,220	0/0:7,0:7:15:0,15,137	0/0:11,0:11:21:0,21,192	1/1:0,5:6:15.04:173,15,0	0/0:16,0:16:45.02:0,45,412	1/1:1,10:11:30.09:346,30,0	0/0:21,0:21:51.02:0,51,467	0/0:7,0:7:15.01:0,15,137	0/0:3,0:3:6:0,6,55	1/1:0,3:3:9.03:104,9,0	1/1:3,5:8:9.03:104,9,0	1/1:2,6:8:18.05:208,18,0	0/0:19,0:19:51.03:0,51,467	0/0:21,0:21:57.02:0,57,522	0/0:19,0:19:57.03:0,57,521	0/0:17,0:17:48.02:0,48,439
chr10	58154319	.	C	CT	4711.65	PASS	AB=0.671;AC=36;AF=0.643;AN=56;BaseQRankSum=0.503;DP=540;FS=6.525;HRun=11;HaplotypeScore=80.1609;InbreedingCoeff=0.6913;MQ=79.33;MQ0=1;MQRankSum=-3.003;QD=13.78;ReadPosRankSum=2.199;VQSLOD=5.0946;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:38:85.72:0,86,649	0/0:5,0:5:14.80:0,15,107	0/0:33,0:25:21.86:0,22,148	0/0:29,0:22:19.99:0,20,120	0/1:12,2:16:16.43:16,0,225	1/1:2,0:17:28.28:143,28,0	1/1:9,0:19:25.57:129,26,0	0/0:26,1:28:26.30:0,26,386	0/1:5,13:19:1.54:335,0,2	1/1:6,23:30:51.76:689,52,0	1/1:4,10:15:6.62:222,7,0	1/1:4,0:11:11.32:56,11,0	0/0:16,0:17:34.86:0,35,261	0/0:14,0:17:18.29:0,18,218	1/1:4,12:16:33.07:335,33,0	1/1:4,0:10:9.30:54,9,0	0/0:28,0:29:70.75:0,71,540	1/1:4,0:16:28.47:145,28,0	0/1:10,10:21:7.63:254,0,8	1/1:1,18:20:21.85:402,22,0	1/1:4,12:16:7.71:252,8,0	1/1:2,0:14:31.37:163,31,0	1/1:1,0:16:28.52:148,29,0	1/1:10,0:16:14.20:72,14,0	1/1:3,6:13:6.70:217,7,0	1/1:3,14:17:45:429,45,0	0/1:5,17:22:4.43:313,0,4	1/1:9,9:18:18.74:336,19,0
chr10	58154550	.	TCTA	T	1880.64	PASS	AB=0.902;AC=24;AF=0.429;AN=56;BaseQRankSum=2.233;DP=415;FS=12.286;HRun=0;HaplotypeScore=173.0438;InbreedingCoeff=-0.3711;MQ=47.68;MQ0=5;MQRankSum=-4.997;QD=5.75;ReadPosRankSum=-5.761;VQSLOD=-0.4968;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:26,5:29:99:119,0,189	1/1:2,2:3:3.01:39,3,0	0/0:19,0:9:16.14:0,16,190	0/1:22,0:13:17.44:17,0,58	0/0:10,0:10:7.57:0,8,75	0/1:21,1:22:99:129,0,202	0/1:27,1:29:99:172,0,368	0/1:6,9:15:12.09:410,0,12	0/1:20,2:22:88.05:123,0,88	0/1:12,1:13:72.33:120,0,72	0/1:11,0:11:5.23:52,0,5	0/0:11,1:12:16.34:0,16,231	0/1:17,0:17:10.09:10,0,281	0/0:18,0:17:2.79:0,3,272	0/1:15,1:16:5.62:6,0,93	0/1:12,2:13:99:104,0,142	1/1:4,2:6:11.53:113,12,0	0/0:8,0:8:11.77:0,12,131	0/1:17,2:18:35.86:133,0,36	0/1:18,2:20:15.82:16,0,84	0/0:5,0:4:0.83:0,1,2	0/1:11,3:14:10.39:10,0,94	0/1:14,4:17:50.17:50,0,267	0/0:16,0:16:0.77:0,1,83	0/1:7,2:8:22.64:89,0,23	0/1:8,1:8:82.25:124,0,82	0/1:9,0:9:9.62:10,0,43	1/1:3,3:6:13.88:191,14,0
chr10	58154552	.	T	TTCC	2151.42	PASS	AB=0.977;AC=34;AF=0.607;AN=56;BaseQRankSum=1.206;DP=403;FS=36.005;HRun=0;HaplotypeScore=169.8896;InbreedingCoeff=0.0439;MQ=47.79;MQ0=5;MQRankSum=-2.798;QD=6.50;ReadPosRankSum=-3.010;VQSLOD=1.0779;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:28,2:28:37.18:312,37,0	0/0:3,0:2:0:0,0,0	0/0:17,0:7:13.63:0,14,123	0/1:21,0:13:24.44:24,0,54	1/1:9,0:10:1.09:3,1,0	0/1:21,0:22:25.70:26,0,108	0/1:28,0:29:48.89:49,0,256	0/1:15,0:15:9.43:18,0,9	1/1:20,0:22:35.81:304,36,0	1/1:10,0:11:1.15:139,1,0	1/1:8,3:11:21.45:176,21,0	0/0:12,0:12:1.17:0,1,142	0/1:17,0:17:60.90:61,0,137	0/1:16,0:17:64.56:94,0,65	1/1:5,9:16:4.68:104,5,0	0/1:14,0:13:34.40:34,0,109	1/1:6,0:6:2.17:15,2,0	0/0:6,0:6:5.31:0,5,72	0/1:16,1:18:7.89:223,0,8	1/1:17,1:18:20.38:133,20,0	1/1:5,0:4:2.98:25,3,0	0/1:12,0:14:9.08:20,0,9	0/0:18,0:17:8.41:0,8,112	0/0:14,0:16:8.18:0,8,82	1/1:8,0:7:1.89:35,2,0	1/1:6,3:8:17.47:237,17,0	1/1:1,7:8:9.92:187,10,0	0/1:5,0:6:2.20:92,0,2
chr10	58154554	.	CCT	C	166.28	PASS	AB=0.824;AC=3;AF=0.054;AN=56;BaseQRankSum=5.070;DP=404;FS=27.901;HRun=0;HaplotypeScore=172.1087;InbreedingCoeff=0.1583;MQ=45.30;MQ0=5;MQRankSum=-1.495;QD=5.20;ReadPosRankSum=0.678;VQSLOD=1.3781;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:22,6:26:99:240,0,423	0/0:3,0:2:2.98:0,3,21	0/0:17,0:6:7.20:0,7,140	0/0:21,0:11:14:0,14,173	0/0:9,1:10:11.89:0,12,151	0/0:21,0:21:45.51:0,46,592	0/0:31,0:30:42.31:0,42,860	0/0:20,0:20:17:0,17,310	0/0:18,0:18:44.37:0,44,517	0/0:12,0:12:29.05:0,29,349	0/0:13,0:13:15.04:0,15,178	0/0:11,0:11:16.66:0,17,338	0/0:17,0:17:36.62:0,37,646	0/0:17,0:16:37.25:0,37,542	0/0:18,0:18:17.15:0,17,317	0/0:13,0:12:12.56:0,13,397	0/0:6,0:6:12.69:0,13,123	0/0:6,0:6:11.91:0,12,189	0/0:18,1:18:20.62:0,21,439	0/0:19,0:19:34.85:0,35,451	1/1:4,0:3:0.47:1,0,0	0/0:14,0:14:17.85:0,18,278	0/0:18,0:17:38.29:0,38,605	0/0:17,0:17:11.37:0,11,188	0/0:8,0:7:14.83:0,15,176	0/0:10,0:9:1.79:0,2,274	0/0:8,0:8:12.03:0,12,136	0/0:5,0:5:11.36:0,11,79
chr10	58154562	.	T	TCTTC	1389.34	PASS	AB=0.968;AC=18;AF=0.333;AN=54;BaseQRankSum=6.821;DP=386;FS=17.737;HRun=0;HaplotypeScore=187.6527;InbreedingCoeff=-0.3997;MQ=46.08;MQ0=5;MQRankSum=-3.469;QD=5.60;ReadPosRankSum=3.948;VQSLOD=1.5967;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:23:81.96:159,0,82	./.	0/0:17,0:5:5.92:0,6,103	0/0:18,0:9:4.01:0,4,118	0/0:8,0:8:2.67:0,3,26	0/1:20,0:20:72.77:73,0,374	0/1:24,5:28:99:316,0,682	0/1:11,1:16:99:182,0,210	0/0:17,0:17:3.55:0,4,278	0/0:12,0:12:22.20:0,22,208	0/0:12,0:11:5.05:0,5,110	0/0:10,0:10:21.54:0,22,379	0/1:16,0:16:60.32:60,0,399	0/1:17,0:16:62.99:63,0,276	0/1:17,0:17:23.16:23,0,185	0/1:11,2:12:99:127,0,290	0/1:4,1:5:4.99:51,0,5	0/0:5,1:6:11.77:0,12,149	0/1:17,0:16:99:165,0,157	0/1:14,0:15:43.99:103,0,44	1/1:5,0:5:5.96:70,6,0	0/1:15,0:15:32.77:33,0,97	0/0:17,0:16:29.67:0,30,422	0/0:13,3:17:5.93:0,6,168	0/1:10,0:9:41.27:46,0,41	0/1:13,0:12:41.46:41,0,113	0/1:9,0:9:7.35:7,0,39	0/1:5,0:5:21.66:22,0,26
chr10	58154563	.	CCT	C	840.78	PASS	AB=0.969;AC=24;AF=0.444;AN=54;BaseQRankSum=5.523;DP=375;FS=29.953;HRun=0;HaplotypeScore=156.8696;InbreedingCoeff=-0.2623;MQ=45.98;MQ0=5;MQRankSum=-1.287;QD=3.08;ReadPosRankSum=2.885;VQSLOD=0.9430;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:19,6:23:36.52:293,0,37	./.	0/0:16,0:4:6.01:0,6,75	0/0:17,0:7:10.89:0,11,130	0/1:7,1:8:0:0,0,0	0/1:18,0:18:54.58:55,0,224	0/1:27,0:27:29.99:30,0,478	0/1:16,0:16:73.84:74,0,163	0/1:16,0:16:31.08:31,0,126	0/1:12,0:12:11.94:12,0,125	0/1:11,1:11:19.53:20,0,66	0/0:10,0:10:23.63:0,24,281	0/1:16,0:16:17.14:17,0,237	0/1:17,0:16:74.63:75,0,128	0/0:17,0:17:7.82:0,8,162	0/1:13,0:12:27.43:27,0,186	1/1:3,1:4:5.21:41,5,0	0/0:6,0:6:3.90:0,4,100	0/1:17,0:16:48.99:49,0,85	1/1:15,0:15:3.98:65,4,0	1/1:6,0:5:3.39:23,3,0	0/1:14,0:14:18.91:30,0,19	0/0:17,0:16:10.89:0,11,226	0/0:17,0:17:6.09:0,6,133	1/1:9,1:9:7.57:69,8,0	0/1:13,0:12:23.04:23,0,110	0/1:7,1:8:2.45:2,0,59	0/1:5,0:5:12.53:60,0,13
chr10	58154571	.	C	CTTCTTA	575.87	PASS	AB=0.975;AC=13;AF=0.241;AN=54;BaseQRankSum=5.621;DP=306;FS=12.196;HRun=0;HaplotypeScore=179.1129;InbreedingCoeff=-0.2242;MQ=48.28;MQ0=4;MQRankSum=-0.199;QD=4.20;ReadPosRankSum=1.691;VQSLOD=2.1565;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:21:40.12:0,40,305	./.	0/0:13,0:6:6.47:0,6,55	0/0:13,0:6:1.47:0,1,141	0/1:7,0:6:0:0,0,0	0/1:14,0:14:99:111,0,163	0/0:24,0:23:2.49:0,2,449	0/1:20,0:20:99:103,0,278	0/1:13,0:13:23.42:23,0,369	0/1:13,0:12:26.23:26,0,282	0/0:9,0:8:10.54:0,11,144	0/0:8,0:7:11.13:0,11,203	0/1:8,1:9:99:101,0,265	0/1:11,3:13:99:209,0,210	0/1:14,0:14:27.92:28,0,185	0/1:10,0:9:58.32:58,0,219	0/1:5,0:5:31.12:31,0,55	0/0:5,0:5:6.02:0,6,94	0/0:14,0:12:9.36:0,9,273	0/1:9,0:9:1.07:1,0,10	0/0:6,0:5:2.19:0,2,7	1/1:9,0:9:2.86:13,3,0	0/0:9,0:8:11.65:0,12,73	0/0:14,0:14:1.11:0,1,36	0/0:6,0:5:0.45:0,0,87	0/0:9,0:8:7.06:0,7,162	0/0:7,0:7:2.65:0,3,88	0/0:5,0:5:1.81:0,2,154
chr10	58154580	.	C	CTT	58.84	PASS	AB=1.000;AC=15;AF=0.278;AN=54;BaseQRankSum=2.028;DP=251;FS=3.006;HRun=1;HaplotypeScore=129.7234;InbreedingCoeff=0.1096;MQ=50.98;MQ0=2;MQRankSum=-0.285;QD=0.60;ReadPosRankSum=1.211;VQSLOD=-0.7474;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,2:21:31.84:0,32,206	./.	0/0:12,0:5:2.14:0,2,44	0/0:10,0:5:8.02:0,8,47	1/1:6,0:5:0.89:2,1,0	0/1:9,0:9:25.02:25,0,140	0/1:22,0:21:3.95:4,0,332	0/0:19,0:19:12.23:0,12,321	0/0:12,0:12:11.64:0,12,228	0/0:10,0:9:20.39:0,20,262	0/0:7,0:6:11.39:0,11,89	0/1:8,0:7:1.90:2,0,125	0/1:9,0:9:72.23:72,0,178	0/1:10,0:9:16.24:16,0,62	0/0:8,0:8:7.09:0,7,97	0/1:7,0:6:12.38:12,0,32	0/0:5,0:5:6.39:0,6,67	0/0:5,0:5:2.96:0,3,21	0/0:10,0:9:14.60:0,15,161	0/0:5,0:5:5.03:0,5,20	1/1:4,1:4:2.90:16,3,0	1/1:5,0:5:2.88:15,3,0	1/1:4,0:3:1.54:12,2,0	0/1:13,0:13:1.78:13,0,2	0/0:6,0:5:0.39:0,0,16	0/0:8,1:8:13.35:0,13,122	0/0:5,0:5:9.30:0,9,70	0/0:5,0:5:7.41:0,7,74
chr10	58154582	.	TCTA	T	1074.54	PASS	AB=0.974;AC=39;AF=0.722;AN=54;BaseQRankSum=-0.438;DP=235;FS=6.216;HRun=0;HaplotypeScore=120.5599;InbreedingCoeff=0.0930;MQ=48.97;MQ0=2;MQRankSum=0.030;QD=5.04;ReadPosRankSum=-2.464;VQSLOD=1.4715;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:21:12.94:76,13,0	./.	0/0:11,0:5:5.25:0,5,88	0/1:9,0:4:7.01:7,0,13	0/0:6,0:5:1.25:0,1,3	1/1:8,0:8:12.43:132,12,0	0/1:20,0:19:75.29:112,0,75	0/1:18,1:19:7.48:100,0,7	1/1:10,0:10:10.60:58,11,0	0/1:9,0:8:26.27:26,0,49	1/1:7,0:6:6.58:69,7,0	0/1:7,0:6:9.08:83,0,9	0/1:7,2:9:29.99:70,0,30	1/1:9,1:9:18.62:142,19,0	1/1:8,0:8:1.87:8,2,0	0/0:4,0:4:4.54:0,5,23	0/1:5,0:5:1.19:1,0,35	0/1:5,0:5:0:0,0,0	1/1:8,0:7:1.86:36,2,0	1/1:5,0:5:5.60:25,6,0	1/1:5,0:4:3.79:18,4,0	1/1:5,0:5:2.84:14,3,0	1/1:2,0:3:5.97:50,6,0	1/1:12,0:12:6.74:23,7,0	1/1:5,0:5:4.82:69,5,0	1/1:9,0:8:6.93:44,7,0	1/1:5,0:5:7.46:50,7,0	0/1:5,0:5:1.59:2,0,11
chr10	58154583	.	CTA	C	271.52	PASS	AB=0.816;AC=18;AF=0.346;AN=52;BaseQRankSum=2.685;DP=198;FS=1.693;HRun=0;HaplotypeScore=107.7819;InbreedingCoeff=-0.0974;MQ=51.83;MQ0=1;MQRankSum=-0.097;QD=2.47;ReadPosRankSum=1.475;VQSLOD=2.1688;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:16,5:18:33.90:34,0,111	./.	0/0:11,0:5:9.02:0,9,132	0/0:9,0:4:5.93:0,6,40	0/0:2,0:3:0:0,0,0	0/1:3,4:7:15.52:57,0,16	0/1:12,4:15:53.16:53,0,216	0/0:19,0:19:48.06:0,48,372	0/0:7,0:7:4.07:0,4,105	0/1:7,1:7:16.35:16,0,135	0/1:3,2:4:11.20:15,0,11	0/1:3,2:4:33.44:43,0,33	0/0:9,0:9:1.42:0,1,80	1/1:9,1:9:0.22:39,0,0	0/0:4,0:4:1.94:0,2,17	0/0:3,0:3:5.63:0,6,49	0/0:5,0:5:6.64:0,7,78	./.	0/1:6,1:6:14.15:14,0,72	0/0:4,0:4:1.59:0,2,26	0/0:3,1:3:0.45:0,0,1	1/1:2,2:4:0.89:2,1,0	1/1:2,2:3:5.53:40,6,0	0/1:6,0:6:1.15:1,0,10	0/1:5,0:5:2.30:2,0,25	0/1:5,3:7:12.62:41,0,13	1/1:2,2:4:2.28:42,2,0	0/0:5,0:5:4.74:0,5,61
chr10	58154594	.	T	TC	607.15	PASS	AB=0.781;AC=29;AF=0.604;AN=48;BaseQRankSum=3.480;DP=122;FS=2.491;HRun=2;HaplotypeScore=82.0831;InbreedingCoeff=0.0979;MQ=53.50;MQ0=1;MQRankSum=1.235;QD=6.20;ReadPosRankSum=2.053;VQSLOD=1.0226;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:13,5:15:8.80:37,9,0	./.	0/0:4,0:3:5.87:0,6,40	./.	0/0:2,0:2:2.37:0,2,8	0/1:4,2:6:2.86:3,0,30	0/1:10,1:11:23.20:34,0,23	0/1:3,1:4:11.73:76,0,12	0/0:3,1:4:7.90:0,8,44	0/1:3,1:4:27.67:36,0,28	1/1:2,1:3:0.47:1,0,0	0/0:3,0:3:5.89:0,6,38	0/1:6,2:8:52.53:79,0,53	1/1:6,1:6:11.75:96,12,0	1/1:0,1:1:2.98:22,3,0	0/1:2,1:3:8.67:16,0,9	0/0:4,1:5:8.29:0,8,47	./.	0/1:2,1:3:1.22:40,0,1	./.	0/1:1,1:1:0:0,0,0	1/1:4,0:4:1.55:4,2,0	1/1:2,2:3:2.68:11,3,0	1/1:4,0:4:0.89:3,1,0	1/1:3,0:3:1.72:5,2,0	1/1:3,3:5:8.80:98,9,0	0/1:3,1:4:12.24:59,0,12	1/1:0,3:3:9.03:123,9,0
chr10	58154765	.	A	ACTC	6908.61	PASS	AB=0.809;AC=20;AF=0.370;AN=54;BaseQRankSum=-3.953;DP=709;FS=0.000;HRun=0;HaplotypeScore=168.5882;InbreedingCoeff=0.8189;MQ=52.16;MQ0=5;MQRankSum=-4.425;QD=24.24;ReadPosRankSum=-0.920;VQSLOD=4.1081;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:36:53.03:0,53,827	0/0:12,0:12:23.99:0,24,322	0/0:37,0:27:15.73:0,16,610	0/0:24,0:18:9.95:0,10,331	0/0:30,0:30:38.17:0,38,585	0/0:27,0:27:33.08:0,33,445	0/0:31,0:32:53.15:0,53,825	0/0:21,0:21:42.08:0,42,572	1/1:12,7:19:26.64:489,27,0	1/1:24,17:40:72.09:1284,72,0	1/1:11,9:20:21.50:391,22,0	0/0:21,0:21:31.52:0,32,421	0/0:31,0:31:51.15:0,51,725	0/0:29,0:29:50.84:0,51,746	0/1:11,17:29:39.67:817,0,40	0/0:26,0:26:54.18:0,54,780	0/0:19,0:17:39.06:0,39,561	0/0:14,0:14:21.07:0,21,307	1/1:16,1:16:9.03:163,9,0	1/1:27,9:36:7.23:893,7,0	1/1:4,11:16:18.06:371,18,0	0/1:27,0:27:6.85:7,0,465	0/0:32,0:32:21.10:0,21,467	0/0:26,0:26:38.72:0,39,562	1/1:17,11:28:48.04:786,48,0	1/1:15,18:31:66.11:1238,66,0	1/1:13,6:19:27.01:469,27,0	./.
chr10	58155788	.	G	GT	1907.99	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-11.694;DP=626;FS=2.563;HRun=4;HaplotypeScore=59.6525;InbreedingCoeff=0.9939;MQ=73.37;MQ0=0;MQRankSum=-3.143;QD=32.90;ReadPosRankSum=-4.005;VQSLOD=2.4421;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,132,1486	1/1:1,10:11:27.09:369,27,0	0/0:17,0:17:36.10:0,36,408	0/0:15,0:13:36.10:0,36,404	0/0:29,0:29:81.23:0,81,919	0/0:27,0:27:81.23:0,81,919	0/0:23,0:23:60.14:0,60,660	1/1:1,19:20:57.19:778,57,0	0/0:21,0:21:57.16:0,57,647	0/0:26,0:26:75.21:0,75,850	0/0:20,0:20:60.16:0,60,671	0/0:23,0:23:66.17:0,66,734	0/0:21,0:21:51.14:0,51,578	0/0:16,0:16:45.13:0,45,510	0/0:21,0:21:60.16:0,60,671	0/0:21,0:21:63.16:0,63,704	1/1:3,24:27:66.22:903,66,0	0/0:19,0:19:54.15:0,54,612	0/0:28,0:28:72.17:0,72,796	0/0:23,0:23:63.18:0,63,715	0/0:19,0:19:57.16:0,57,647	0/0:27,0:27:75.20:0,75,840	0/0:21,0:21:54.15:0,54,612	0/0:20,0:20:60.14:0,60,659	0/0:22,0:22:63.15:0,63,696	0/0:27,0:27:81.23:0,81,918	0/0:30,0:29:81.21:0,81,909	0/0:5,0:5:15.04:0,15,170
chr10	58161494	.	G	GA	48.19	PASS	AB=0.875;AC=22;AF=0.524;AN=42;BaseQRankSum=3.626;DP=69;FS=1.974;HRun=0;HaplotypeScore=26.5302;InbreedingCoeff=0.3142;MQ=80.12;MQ0=2;MQRankSum=-3.057;QD=1.51;ReadPosRankSum=0.970;VQSLOD=1.0350;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:6:6.02:0,6,83	./.	1/1:5,0:2:2.72:16,3,0	0/0:7,0:6:8.04:0,8,106	0/0:1,0:1:3.01:0,3,42	0/1:3,0:3:16.61:20,0,17	0/0:2,0:2:2.82:0,3,20	0/0:7,0:7:17.09:0,17,208	./.	1/1:1,1:2:3.31:15,3,0	1/1:1,1:2:2.50:9,2,0	1/1:1,0:1:2.04:6,2,0	0/0:3,0:3:9.03:0,9,125	0/0:5,0:5:13.29:0,13,170	1/1:2,0:2:2.49:7,2,0	./.	0/0:2,0:2:6.01:0,6,68	1/1:1,0:1:2.92:17,3,0	1/1:3,1:2:5.97:50,6,0	0/1:2,1:3:4.91:5,0,8	./.	./.	./.	./.	1/1:2,0:2:4.87:17,5,0	0/1:2,1:3:10.56:11,0,11	0/1:2,0:2:2.38:2,0,8	1/1:2,0:2:3.11:7,3,0
chr10	58161496	.	G	GGA	334.18	PASS	AB=1.000;AC=20;AF=0.455;AN=44;BaseQRankSum=3.940;DP=74;FS=4.233;HRun=0;HaplotypeScore=27.3666;InbreedingCoeff=0.3838;MQ=83.21;MQ0=2;MQRankSum=-2.737;QD=11.52;ReadPosRankSum=2.285;VQSLOD=2.8135;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:6:6.02:0,6,84	./.	0/1:6,0:2:10.53:11,0,22	0/0:9,0:8:4.64:0,5,131	0/0:1,0:1:3.01:0,3,45	1/1:4,0:4:0.83:20,1,0	0/1:2,0:2:12.86:13,0,15	0/0:7,0:7:18.52:0,19,254	./.	0/0:2,0:2:0.57:0,1,1	0/0:2,0:2:1.25:0,1,3	1/1:1,0:1:1.55:4,2,0	0/0:3,0:3:9.03:0,9,134	0/0:5,0:5:12.51:0,13,182	1/1:2,0:2:4.07:12,4,0	./.	0/0:2,0:2:6.01:0,6,72	1/1:1,0:1:2.98:21,3,0	1/1:3,1:2:5.69:65,6,0	0/0:3,0:3:3.63:0,4,13	./.	./.	./.	0/0:1,0:1:0:0,0,0	1/1:0,2:2:6.02:110,6,0	1/1:1,2:3:5.79:110,6,0	1/1:0,2:2:6.02:91,6,0	1/1:2,0:2:4.07:12,4,0
chr10	58161498	.	GAGGA	G	265.43	PASS	AB=0.875;AC=22;AF=0.500;AN=44;BaseQRankSum=2.750;DP=77;FS=3.851;HRun=0;HaplotypeScore=30.2855;InbreedingCoeff=0.2895;MQ=82.49;MQ0=2;MQRankSum=-4.009;QD=8.04;ReadPosRankSum=0.613;VQSLOD=1.4457;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:6:9.03:0,9,154	./.	0/1:6,0:2:13.33:13,0,93	0/0:10,0:9:24.39:0,24,423	0/0:1,0:1:3.01:0,3,82	1/1:1,0:4:2.38:32,2,0	0/1:2,0:2:11.01:14,0,11	0/0:8,0:8:21.07:0,21,541	./.	1/1:1,1:2:5.99:56,6,0	1/1:1,1:2:3:28,3,0	1/1:0,0:1:2.74:12,3,0	0/0:4,0:4:12.04:0,12,298	0/0:5,0:5:11.27:0,11,328	1/1:2,0:2:6.01:60,6,0	./.	0/0:2,0:2:6.02:0,6,162	1/1:0,0:1:2.98:21,3,0	1/1:3,1:2:5.05:54,5,0	0/1:2,1:3:23.61:24,0,29	./.	./.	./.	1/1:1,0:1:1.25:3,1,0	0/0:2,0:2:3.11:0,3,8	0/1:2,1:3:20.93:29,0,21	0/0:2,0:2:1.17:0,1,4	1/1:2,0:2:6.01:61,6,0
chr10	58161501	.	GA	G	171.07	PASS	AB=1.000;AC=23;AF=0.442;AN=52;BaseQRankSum=2.748;DP=96;FS=3.878;HRun=1;HaplotypeScore=31.4906;InbreedingCoeff=0.4679;MQ=88.17;MQ0=2;MQRankSum=-3.785;QD=4.17;ReadPosRankSum=1.996;VQSLOD=0.7645;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:7:9.03:0,9,126	./.	0/1:8,0:4:8.57:9,0,44	0/0:12,0:11:26.06:0,26,325	0/0:1,0:1:3.01:0,3,48	1/1:4,0:4:6.93:28,7,0	0/0:2,0:2:5.83:0,6,34	0/0:9,0:9:24.08:0,24,378	1/1:1,0:1:0.47:1,0,0	1/1:1,1:2:5.82:32,6,0	1/1:2,1:3:2.68:11,3,0	0/0:1,0:1:0.47:0,0,1	0/0:4,0:4:12.04:0,12,192	0/0:5,0:5:11.62:0,12,190	1/1:1,2:3:8.92:64,9,0	0/0:3,0:2:5.95:0,6,56	0/0:2,0:2:6.02:0,6,96	1/1:2,0:2:0.47:1,0,0	1/1:6,0:4:11.89:88,12,0	0/1:3,0:3:5.81:6,0,36	./.	0/0:2,0:2:5.95:0,6,54	0/0:2,0:2:2.04:0,2,6	0/0:3,0:3:5.88:0,6,50	1/1:2,0:2:4.97:18,5,0	0/1:3,0:3:2.62:14,0,3	1/1:2,0:2:4.72:15,5,0	1/1:0,2:2:5.93:40,6,0
chr10	58161502	.	A	AGGGG	1137.97	PASS	AB=1.000;AC=24;AF=0.462;AN=52;BaseQRankSum=2.383;DP=96;FS=3.259;HRun=2;HaplotypeScore=35.2041;InbreedingCoeff=0.4093;MQ=88.17;MQ0=2;MQRankSum=-3.241;QD=24.74;ReadPosRankSum=0.924;VQSLOD=0.8927;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:7,0:7:20.54:21,0,95	./.	0/1:7,0:4:10.11:10,0,72	0/0:12,0:11:13.74:0,14,324	0/0:1,0:1:3.01:0,3,56	0/0:4,0:4:4.76:0,5,28	0/0:2,0:2:5.91:0,6,45	0/0:9,0:9:24.07:0,24,391	1/1:1,0:1:3:26,3,0	1/1:2,0:2:6.02:114,6,0	1/1:3,0:3:3.01:54,3,0	0/1:1,0:1:0:0,0,0	0/0:4,0:4:12.04:0,12,217	0/0:4,0:5:12.04:0,12,224	1/1:3,0:3:9.02:156,9,0	1/1:2,0:2:2.13:5,2,0	0/0:2,0:2:6.02:0,6,112	0/0:2,0:2:2.88:0,3,15	1/1:5,1:4:12.03:216,12,0	0/1:3,0:3:47.98:49,0,48	./.	0/0:2,0:2:1.86:0,2,16	0/0:2,0:2:3:0,3,26	0/0:3,0:3:8.78:0,9,52	1/1:0,2:2:6.02:162,6,0	1/1:1,2:3:9.03:204,9,0	1/1:0,2:2:6.02:151,6,0	1/1:2,0:2:6.02:132,6,0
chr10	58161503	.	GGAGGA	G	239.93	PASS	AB=0.927;AC=14;AF=0.269;AN=52;BaseQRankSum=1.497;DP=101;FS=1.676;HRun=0;HaplotypeScore=38.2202;InbreedingCoeff=0.1359;MQ=90.24;MQ0=2;MQRankSum=-1.927;QD=5.00;ReadPosRankSum=0.841;VQSLOD=0.9337;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:7:15.05:0,15,275	./.	0/1:8,0:4:28.90:29,0,160	0/1:12,0:12:15.55:16,0,601	0/0:1,0:1:3.01:0,3,97	0/0:5,0:5:8.09:0,8,71	0/0:2,0:2:6.01:0,6,89	0/0:9,0:9:24.08:0,24,720	1/1:1,0:1:2.68:11,3,0	0/1:2,1:3:4.68:61,0,5	1/1:2,1:3:3.01:31,3,0	0/0:2,0:2:5.16:0,5,25	0/0:4,0:4:12.04:0,12,371	0/0:5,0:5:12.04:0,12,387	0/1:2,2:4:3.18:86,0,3	0/0:3,0:2:6.02:0,6,67	0/0:2,0:2:6.02:0,6,192	0/0:2,0:2:2.98:0,3,22	0/1:6,0:4:5.39:22,0,5	0/1:3,0:3:26.18:26,0,46	./.	0/0:2,0:2:6.02:0,6,67	0/1:2,0:2:0:0,0,0	0/0:3,0:3:5.85:0,6,48	0/0:2,0:2:6.01:0,6,57	0/1:3,0:3:2.11:2,0,72	0/0:2,0:2:5.84:0,6,41	1/1:0,2:2:6.02:90,6,0
chr10	58161523	.	A	AGACGATGAC	2622.36	PASS	AB=1.000;AC=17;AF=0.315;AN=54;BaseQRankSum=-1.540;DP=180;FS=2.335;HRun=0;HaplotypeScore=67.0902;InbreedingCoeff=0.6821;MQ=84.21;MQ0=0;MQRankSum=-6.581;QD=50.43;ReadPosRankSum=-0.223;VQSLOD=3.3535;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,6:9:9.03:412,9,0	./.	0/0:16,0:12:17.96:0,18,313	0/0:23,0:21:30.09:0,30,700	1/1:2,3:6:6.02:218,6,0	0/0:8,0:8:21.06:0,21,478	0/0:3,0:3:9.03:0,9,252	0/0:14,0:14:24.07:0,24,515	0/0:2,0:2:6.02:0,6,168	0/0:10,0:10:27.08:0,27,600	0/0:4,0:4:9.03:0,9,234	1/1:2,0:2:3.48:135,3,0	0/0:6,0:6:18.06:0,18,481	0/0:5,0:5:15.04:0,15,361	0/0:7,0:7:21.07:0,21,532	1/1:3,5:8:21.07:830,21,0	0/1:4,0:4:23.64:24,0,240	1/1:0,4:4:6.02:276,6,0	0/0:4,0:4:3:0,3,28	0/0:6,0:6:15.05:0,15,415	0/0:2,0:2:6.02:0,6,145	1/1:3,3:7:9.03:412,9,0	1/1:2,4:7:9.03:355,9,0	1/1:2,2:5:3.01:137,3,0	0/0:6,0:6:18.05:0,18,424	0/0:5,0:5:12.04:0,12,303	0/0:4,0:4:12.03:0,12,273	0/0:3,0:3:9.03:0,9,252
chr10	58161994	.	TTGTG	T	750.72	PASS	AB=0.888;AC=21;AF=0.438;AN=48;BaseQRankSum=1.844;DP=560;FS=3.480;HRun=0;HaplotypeScore=101.7157;InbreedingCoeff=0.3359;MQ=56.72;MQ0=16;MQRankSum=-0.236;QD=2.87;ReadPosRankSum=1.545;VQSLOD=1.4484;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:41:21.02:0,21,319	0/0:10,0:10:9.03:0,9,180	./.	./.	0/0:24,0:25:17.77:0,18,326	1/1:23,4:26:3.01:46,3,0	1/1:19,3:21:6.01:92,6,0	0/0:25,0:23:1.25:0,1,3	0/1:13,1:15:6.51:40,0,7	0/1:8,1:9:36.91:40,0,37	0/0:10,0:12:2.74:0,3,12	./.	0/0:14,0:14:12.02:0,12,177	0/0:22,0:21:21.07:0,21,429	1/1:11,3:15:9.02:119,9,0	1/1:15,4:19:6.02:92,6,0	0/0:24,0:27:15.05:0,15,277	0/1:20,0:20:18.82:19,0,28	0/0:11,0:11:1.25:0,1,3	0/0:8,0:11:8.23:0,8,36	0/0:29,0:29:20.96:0,21,358	1/1:20,3:23:2.48:170,2,0	1/1:21,3:23:0.47:1,0,0	1/1:26,5:30:15.04:211,15,0	1/1:11,0:12:2.84:14,3,0	./.	0/1:24,1:29:15.44:38,0,15	0/1:11,0:14:6.44:22,0,6
chr10	58162404	.	ATC	A	680.78	PASS	AB=0.916;AC=20;AF=0.385;AN=52;BaseQRankSum=2.920;DP=569;FS=1.652;HRun=0;HaplotypeScore=75.9796;InbreedingCoeff=0.3588;MQ=73.10;MQ0=18;MQRankSum=0.676;QD=2.44;ReadPosRankSum=1.391;VQSLOD=1.5732;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:23:12.03:0,12,156	0/0:8,0:8:5.81:0,6,89	./.	0/1:41,0:22:0:0,0,0	0/0:16,0:17:6:0,6,51	1/1:21,0:27:8.52:42,9,0	1/1:11,4:15:6.01:65,6,0	0/0:29,0:29:2.98:0,3,21	0/0:16,0:16:9.03:0,9,134	0/0:27,0:28:39.02:0,39,431	0/0:17,0:17:15.01:0,15,155	1/1:14,2:16:8.85:79,9,0	0/0:21,0:21:18.06:0,18,265	0/1:12,1:13:17.57:18,0,161	0/0:21,0:21:18.05:0,18,248	0/0:20,0:31:23.71:0,24,227	0/1:16,1:16:11.52:12,0,145	1/1:11,4:15:12.03:131,12,0	0/0:14,0:14:5.99:0,6,67	1/1:10,0:13:5.35:28,5,0	0/0:12,0:12:2.73:0,3,44	1/1:12,1:13:3.01:33,3,0	1/1:18,5:23:8.79:79,9,0	0/1:18,11:28:11.53:293,0,12	0/0:11,0:11:12.04:0,12,179	0/1:20,0:21:28.51:29,0,109	0/1:31,1:33:40.12:40,0,246	./.
chr10	58163413	.	T	TAA	14292.85	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-10.415;DP=681;FS=1.305;HRun=6;HaplotypeScore=80.0368;InbreedingCoeff=0.9978;MQ=81.84;MQ0=1;MQRankSum=-1.772;QD=42.16;ReadPosRankSum=-0.436;VQSLOD=3.9826;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:69.16:0,69,811	1/1:0,6:6:15.05:254,15,0	0/0:19,0:19:50.90:0,51,550	0/0:18,0:18:44.72:0,45,515	0/0:31,0:31:84.24:0,84,1011	0/0:25,0:25:69.21:0,69,842	0/0:19,0:19:54.16:0,54,656	1/1:3,27:30:81.28:1370,81,0	1/1:1,24:25:75.26:1267,75,0	1/1:6,34:40:99:1692,102,0	1/1:5,14:20:42.14:704,42,0	0/0:32,0:32:87.25:0,87,1048	0/0:17,0:17:45.13:0,45,549	0/0:25,0:25:69.20:0,69,830	1/1:3,26:29:66.23:1116,66,0	0/0:26,0:26:69.20:0,69,842	1/1:3,28:31:72.25:1218,72,0	0/0:20,0:20:45.13:0,45,549	1/1:3,20:23:60.21:1012,60,0	1/1:1,25:26:78.27:1304,78,0	1/1:4,18:22:42.10:680,42,0	0/0:37,0:37:99:0,102,1244	0/0:27,0:27:75.22:0,75,902	0/0:21,0:21:57.18:0,57,695	1/1:1,12:13:36.12:609,36,0	1/1:3,23:27:72.22:1190,72,0	1/1:1,26:26:60.21:1015,60,0	1/1:2,17:19:51.17:863,51,0
chr10	58165973	.	TGAACCA	T	13715.14	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=17.147;DP=679;FS=4.127;HRun=0;HaplotypeScore=147.3862;InbreedingCoeff=0.9892;MQ=86.91;MQ0=0;MQRankSum=-17.907;QD=53.57;ReadPosRankSum=2.892;VQSLOD=4.8389;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,114,4003	0/0:9,0:9:27.09:0,27,954	0/0:36,0:36:95.69:0,96,2951	0/0:26,0:26:56.91:0,57,1676	0/0:32,0:32:93.32:0,93,3261	0/0:25,0:25:72.25:0,72,2488	0/0:15,0:15:42.14:0,42,1485	0/0:34,0:34:93.30:0,93,2960	1/1:1,20:21:45.15:1049,45,0	1/1:2,20:22:60.21:1371,60,0	1/1:1,29:30:75.26:1717,75,0	0/0:27,0:27:81.26:0,81,2733	0/0:20,0:20:57.18:0,57,1933	0/0:22,0:22:63.22:0,63,2210	1/1:2,23:25:60.21:1399,60,0	0/0:23,0:23:69.24:0,69,2406	0/0:18,0:18:48.16:0,48,1629	0/0:26,0:26:75.26:0,75,2584	1/1:4,22:26:63.22:1441,63,0	1/1:2,28:30:69.24:1523,69,0	1/1:3,11:14:15.05:320,15,0	0/0:28,0:28:84.29:0,84,2936	0/0:25,0:25:63.22:0,63,2224	0/0:16,0:16:48.16:0,48,1634	1/1:1,20:21:45.15:1049,45,0	1/1:0,25:25:75.26:1748,75,0	1/1:3,35:38:81.28:1888,81,0	1/1:1,3:4:9.03:210,9,0
chr10	58167196	.	CT	C	8920.29	PASS	AB=0.905;AC=39;AF=0.696;AN=56;BaseQRankSum=12.013;DP=599;FS=8.227;HRun=10;HaplotypeScore=86.9346;InbreedingCoeff=0.9091;MQ=73.90;MQ0=2;MQRankSum=-0.778;QD=20.84;ReadPosRankSum=2.866;VQSLOD=5.5234;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:54.13:0,54,589	0/0:11,0:11:30.07:0,30,324	0/0:13,1:14:11.67:0,12,265	0/1:17,1:18:31.61:32,0,173	0/0:30,0:32:86.89:0,87,916	1/1:2,18:20:53.99:469,54,0	1/1:1,20:21:50.99:443,51,0	0/0:25,1:26:37.11:0,37,630	1/1:1,20:21:59.99:521,60,0	1/1:2,33:35:95.95:829,96,0	1/1:4,14:18:38.97:338,39,0	1/1:2,15:17:44.99:391,45,0	0/0:19,0:19:57.07:0,57,598	0/0:21,0:21:54.12:0,54,582	1/1:1,22:23:65.99:573,66,0	1/1:3,17:20:44.99:391,45,0	0/0:25,0:25:75.20:0,75,830	1/1:4,18:22:53.98:469,54,0	1/1:2,15:17:44.99:391,45,0	1/1:7,27:35:70.99:605,71,0	1/1:2,22:24:62.99:547,63,0	1/1:1,16:17:44.97:391,45,0	1/1:2,21:23:59.99:521,60,0	1/1:1,19:20:50.99:443,51,0	1/1:3,16:19:44.98:391,45,0	1/1:2,15:17:44.99:391,45,0	1/1:2,28:30:71.98:625,72,0	1/1:3,6:9:20.03:162,20,0
chr10	58170736	.	A	ACACTG	19815.74	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-6.050;DP=738;FS=1.322;HRun=0;HaplotypeScore=159.2491;InbreedingCoeff=0.9872;MQ=81.61;MQ0=0;MQRankSum=-17.542;QD=66.95;ReadPosRankSum=0.120;VQSLOD=5.5288;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:36:99:0,105,2106	0/0:3,0:3:9.03:0,9,184	0/0:23,0:23:48.14:0,48,908	0/0:31,0:31:65.43:0,65,1272	0/0:32,0:32:96.28:0,96,1827	0/0:31,0:31:84.27:0,84,1672	0/0:30,0:30:78.27:0,78,1598	0/0:30,0:30:63.21:0,63,1241	1/1:2,22:28:60.21:1810,60,0	1/1:5,26:31:87.28:2536,87,0	1/1:0,23:24:63.22:1906,63,0	0/0:31,0:31:93.31:0,93,1847	0/0:28,0:28:78.25:0,78,1563	0/0:24,0:24:69.24:0,69,1415	1/1:2,18:20:51.18:1552,51,0	0/0:29,0:29:84.25:0,84,1672	0/0:22,0:22:57.19:0,57,1144	0/0:14,0:14:36.10:0,36,700	1/1:6,13:18:48.16:1305,48,0	1/1:4,27:34:72.25:2177,72,0	1/1:10,11:23:33.11:989,33,0	0/0:34,0:34:87.28:0,87,1746	0/0:25,0:25:72.23:0,72,1426	0/0:18,0:18:54.18:0,54,1056	1/1:4,28:32:75.26:2271,75,0	1/1:4,25:31:75.26:2192,75,0	1/1:10,31:42:89.88:2713,90,0	1/1:4,8:12:12.04:365,12,0
chr10	58172116	.	AG	A	6624.95	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=14.670;DP=629;FS=1.013;HRun=7;HaplotypeScore=58.3589;InbreedingCoeff=0.9973;MQ=58.24;MQ0=14;MQRankSum=0.160;QD=25.00;ReadPosRankSum=1.520;VQSLOD=5.3111;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,99,1211	0/0:9,0:9:27.09:0,27,339	0/0:13,0:6:17.94:0,18,192	0/0:19,0:9:18.06:0,18,226	0/0:31,0:30:87.27:0,87,1081	0/0:22,0:22:60.17:0,60,730	0/0:10,0:10:27.09:0,27,340	0/0:22,0:22:42.10:0,42,492	1/1:2,19:21:57.13:582,57,0	1/1:6,25:31:75.15:758,75,0	1/1:2,17:19:45.06:447,45,0	0/0:24,0:24:72.23:0,72,896	0/0:21,0:21:57.18:0,57,717	0/0:15,0:15:42.13:0,42,523	1/1:2,15:17:36.08:367,36,0	0/0:26,0:25:72.21:0,72,891	0/0:30,1:31:54.26:0,54,987	0/0:17,0:17:51.09:0,51,608	1/1:5,29:32:81.16:816,81,0	1/1:2,16:18:42.06:418,42,0	1/1:2,22:24:57.13:582,57,0	0/0:26,0:26:75.24:0,75,941	0/0:19,0:19:48.15:0,48,603	0/0:24,0:24:63.17:0,63,765	1/1:2,28:30:78.18:796,78,0	1/1:2,23:25:69.14:697,69,0	1/1:0,35:35:80.78:826,81,0	1/1:0,11:11:33.08:337,33,0
chr10	58173105	.	TTTG	T	12485.13	PASS	AB=0.862;AC=30;AF=0.536;AN=56;BaseQRankSum=-7.283;DP=684;FS=5.329;HRun=0;HaplotypeScore=291.3316;InbreedingCoeff=-0.0169;MQ=51.94;MQ0=4;MQRankSum=-4.830;QD=21.60;ReadPosRankSum=-4.054;VQSLOD=3.5313;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:21,1:22:99:306,0,221	0/1:15,5:20:99:322,0,207	0/0:21,0:17:42.43:0,42,667	0/0:22,0:21:54.07:0,54,914	0/1:27,8:35:99:461,0,628	1/1:6,32:38:99:1726,108,0	1/1:6,12:17:32.98:462,33,0	0/1:32,1:30:99:434,0,586	0/1:16,3:19:99:118,0,477	0/1:29,2:31:71.97:72,0,842	0/1:21,3:24:99:162,0,444	1/1:8,23:31:84.10:1237,84,0	0/0:18,0:18:54.17:0,54,999	0/0:17,0:17:45.15:0,45,890	0/1:20,7:27:99:234,0,629	1/1:4,27:31:31.67:1371,32,0	0/1:15,4:19:89.37:282,0,89	1/1:6,12:19:43.04:726,43,0	0/1:15,2:17:99:154,0,391	0/1:27,9:36:99:517,0,634	0/1:5,2:7:83.72:84,0,134	1/1:4,32:36:99:1599,105,0	1/1:1,31:32:93.06:1375,93,0	1/1:6,11:17:30.09:475,30,0	0/0:23,1:24:10:0,10,662	0/1:28,5:33:99:223,0,769	0/1:28,5:33:99:147,0,796	0/0:4,0:4:12.03:0,12,123
chr10	58173108	.	G	GTTTTTGTTT	35356.14	PASS	AB=0.977;AC=40;AF=0.714;AN=56;BaseQRankSum=-7.853;DP=669;FS=11.348;HRun=0;HaplotypeScore=310.3329;InbreedingCoeff=0.2928;MQ=55.09;MQ0=4;MQRankSum=-7.907;QD=59.82;ReadPosRankSum=-3.951;VQSLOD=2.6730;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,6:24:54.12:1397,54,0	1/1:10,0:18:54.17:1160,54,0	0/0:20,0:18:47.99:0,48,777	0/0:21,0:20:50.62:0,51,932	1/1:17,14:35:87.25:2726,87,0	0/1:33,0:34:99:222,0,1282	0/1:12,0:12:99:123,0,199	1/1:15,0:31:75.22:1674,75,0	1/1:10,10:20:57.08:1950,57,0	1/1:14,13:30:75.24:2695,75,0	1/1:9,11:24:66.23:2372,66,0	0/1:28,0:28:99:424,0,569	0/0:19,0:19:51.15:0,51,1173	0/0:17,0:17:45.14:0,45,1080	1/1:15,11:28:78.22:2651,78,0	0/1:28,2:30:99:412,0,835	1/1:11,0:19:57.03:1270,57,0	0/1:17,0:18:99:367,0,356	1/1:11,3:14:39.13:1139,39,0	1/1:20,12:37:99:3315,108,0	1/1:7,1:8:12.04:295,12,0	0/1:39,0:39:99:747,0,602	0/1:32,0:32:99:319,0,884	0/1:16,0:16:99:193,0,208	1/1:6,13:23:60.20:2348,60,0	1/1:14,15:32:96.17:3316,96,0	1/1:10,20:31:90.78:3664,91,0	1/1:0,4:4:12.04:578,12,0
chr10	58173162	.	TA	T	19437.64	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=12.392;DP=619;FS=1.407;HRun=1;HaplotypeScore=147.8276;InbreedingCoeff=0.9996;MQ=81.55;MQ0=0;MQRankSum=-10.861;QD=36.47;ReadPosRankSum=4.725;VQSLOD=4.4051;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,24:24:66.21:856,66,0	1/1:0,15:15:45.14:574,45,0	0/0:28,0:28:84.02:0,84,1297	0/0:24,0:24:66.22:0,66,1009	1/1:0,28:28:72.23:934,72,0	1/1:0,31:31:87.28:1102,87,0	1/1:0,15:15:42.14:545,42,0	1/1:2,26:28:78.25:1012,78,0	1/1:0,21:21:54.18:701,54,0	1/1:0,18:18:54.18:700,54,0	1/1:0,22:22:63.20:818,63,0	1/1:0,23:23:69.22:887,69,0	0/0:14,0:14:42.14:0,42,671	0/0:20,0:20:60.18:0,60,929	1/1:0,29:29:84.27:1090,84,0	1/1:0,20:20:57.18:736,57,0	1/1:0,21:21:60.20:778,60,0	1/1:0,16:16:48.16:623,48,0	1/1:0,14:14:42.12:531,42,0	1/1:0,37:37:99:1392,108,0	1/1:0,16:16:36.12:467,36,0	1/1:0,44:44:99:1664,129,0	1/1:0,26:26:69.22:885,69,0	1/1:0,12:12:33.11:428,33,0	1/1:0,20:20:57.18:729,57,0	1/1:0,25:25:75.24:974,75,0	1/1:0,17:17:51.17:662,51,0	1/1:0,11:11:27.09:351,27,0
chr10	58174076	.	AC	A	2892.04	PASS	AB=1.000;AC=49;AF=0.875;AN=56;BaseQRankSum=1.581;DP=516;FS=1.552;HRun=11;HaplotypeScore=93.4287;InbreedingCoeff=0.6745;MQ=81.60;MQ0=2;MQRankSum=-0.716;QD=6.25;ReadPosRankSum=4.788;VQSLOD=1.9608;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:20:28.94:95,29,0	1/1:2,8:10:17.07:161,17,0	0/0:32,0:23:7.57:0,8,118	0/1:28,0:22:23.27:23,0,58	1/1:21,0:21:28.41:92,28,0	1/1:27,0:28:36.84:112,37,0	1/1:18,0:18:26.95:79,27,0	1/1:15,6:22:28.65:266,29,0	1/1:18,0:18:29.29:133,29,0	1/1:11,0:11:22.96:134,23,0	1/1:17,0:17:30.72:156,31,0	1/1:17,0:17:22.40:66,22,0	0/0:12,0:12:26.92:0,27,224	0/0:9,0:9:0.78:0,1,124	1/1:19,0:19:15.42:134,15,0	1/1:22,0:22:34.51:110,35,0	1/1:5,11:16:17.97:148,18,0	1/1:9,0:9:8.15:24,8,0	1/1:21,0:21:31.54:175,32,0	1/1:25,0:25:42.33:275,42,0	1/1:18,0:18:25.42:123,25,0	1/1:17,0:17:27.21:87,27,0	1/1:20,0:21:21.18:71,21,0	1/1:11,0:11:10.65:31,11,0	1/1:19,0:19:20.48:107,20,0	1/1:18,0:18:30.49:155,30,0	1/1:22,0:24:35.49:175,35,0	1/1:11,0:11:19.88:98,20,0
chr10	58174085	.	CCCA	C	6876.88	PASS	AB=0.979;AC=37;AF=0.661;AN=56;BaseQRankSum=0.849;DP=551;FS=1.443;HRun=0;HaplotypeScore=96.3513;InbreedingCoeff=0.5826;MQ=77.86;MQ0=2;MQRankSum=-4.673;QD=16.41;ReadPosRankSum=8.143;VQSLOD=3.8383;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,23:23:42.14:647,42,0	0/0:10,0:10:20.01:0,20,225	0/0:31,0:19:32.35:0,32,467	0/0:29,0:21:15.59:0,16,287	1/1:3,19:22:27.39:643,27,0	1/1:3,23:26:55.05:846,55,0	1/1:0,17:17:42.14:666,42,0	0/0:24,0:24:7.55:0,8,408	1/1:19,2:21:27.69:181,28,0	1/1:15,0:15:5.56:109,6,0	0/1:16,1:17:11.52:82,0,12	1/1:0,17:17:36.04:549,36,0	0/0:13,0:13:39.08:0,39,572	0/0:10,0:10:27.84:0,28,409	0/1:20,0:20:15.96:61,0,16	1/1:1,21:22:50.53:771,51,0	0/0:15,0:15:26.98:0,27,260	1/1:0,10:10:12.04:194,12,0	1/1:18,0:18:26.99:148,27,0	0/1:31,0:31:9.41:113,0,9	1/1:24,0:24:20.97:71,21,0	1/1:0,19:19:45.14:676,45,0	1/1:2,17:19:31.02:458,31,0	1/1:0,12:12:18.06:279,18,0	0/1:26,0:26:26.10:26,0,32	0/1:19,1:20:9.33:115,0,9	1/1:29,0:28:31.03:185,31,0	1/1:11,0:11:16.60:57,17,0
chr10	58174086	.	CCA	C	7256.61	PASS	AB=0.765;AC=42;AF=0.750;AN=56;BaseQRankSum=3.227;DP=557;FS=23.527;HRun=0;HaplotypeScore=87.6247;InbreedingCoeff=0.7408;MQ=78.34;MQ0=2;MQRankSum=0.837;QD=16.38;ReadPosRankSum=6.963;VQSLOD=2.8932;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:23:41.48:297,41,0	0/0:10,0:10:5.46:0,5,83	0/0:32,0:20:15.82:0,16,337	0/0:28,0:21:4.44:0,4,169	1/1:20,2:22:26.60:305,27,0	1/1:25,1:26:58.44:439,58,0	1/1:17,0:17:41.45:308,41,0	0/1:26,0:26:65.88:66,0,261	1/1:2,19:21:33.05:412,33,0	1/1:0,15:15:40.97:315,41,0	1/1:1,15:16:35.47:329,35,0	1/1:17,0:17:35.74:263,36,0	0/0:15,0:15:44.97:0,45,494	0/0:13,0:13:19.70:0,20,380	1/1:1,19:20:17.32:436,17,0	1/1:21,1:22:50.70:395,51,0	0/0:15,0:15:23.90:0,24,122	1/1:10,0:10:11.93:89,12,0	1/1:0,18:18:44.01:456,44,0	1/1:2,29:31:50.52:694,51,0	1/1:0,23:23:27.08:370,27,0	1/1:19,0:19:44.43:314,44,0	1/1:18,1:19:34.82:260,35,0	1/1:12,0:12:17.87:130,18,0	0/1:3,24:27:27.34:241,0,27	1/1:2,17:19:13.89:378,14,0	1/1:2,27:28:38.16:471,38,0	1/1:0,11:11:21.07:290,21,0
chr10	58174898	.	AT	A	3039.06	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.701;DP=692;FS=0.439;HRun=1;HaplotypeScore=111.4504;InbreedingCoeff=0.9958;MQ=86.59;MQ0=0;MQRankSum=-2.235;QD=36.62;ReadPosRankSum=1.556;VQSLOD=3.5098;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,57:57:99:2137,154,0	0/0:13,0:13:39.12:0,39,595	0/0:28,0:28:73.63:0,74,1015	0/0:24,0:24:52.17:0,52,908	1/1:0,26:26:75.21:1024,75,0	0/0:17,0:17:51.16:0,51,791	0/0:27,0:27:81.25:0,81,1247	0/0:25,0:25:75.14:0,75,1099	0/0:26,0:26:78.21:0,78,1173	0/0:38,0:38:99:0,114,1753	0/0:13,0:13:39.13:0,39,622	0/0:21,0:21:60.19:0,60,935	0/0:33,0:33:99:0,99,1493	0/0:24,0:24:72.23:0,72,1126	0/0:35,0:35:99:0,105,1561	0/0:23,0:23:69.24:0,69,1102	0/0:27,0:27:81.25:0,81,1264	0/0:13,0:13:39.13:0,39,622	0/0:14,0:14:42.12:0,42,627	0/0:20,0:20:60.19:0,60,934	0/0:32,0:31:93.32:0,93,1482	0/0:21,0:21:63.20:0,63,980	0/0:26,0:26:78.18:0,78,1188	0/0:23,0:23:69.18:0,69,1023	0/0:30,0:30:90.29:0,90,1413	0/0:21,0:21:63.20:0,63,984	0/0:29,0:28:87.28:0,87,1350	0/0:6,0:6:18.06:0,18,287
chr10	58176313	.	C	CCA	5503.19	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=5.993;DP=618;FS=6.959;HRun=0;HaplotypeScore=89.2947;InbreedingCoeff=0.9992;MQ=68.96;MQ0=0;MQRankSum=-1.226;QD=42.01;ReadPosRankSum=-0.764;VQSLOD=5.7359;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,35:37:99:1693,99,0	1/1:1,12:13:36.12:617,36,0	0/0:24,0:24:53.98:0,54,641	0/0:18,0:17:33.08:0,33,418	1/1:0,14:15:39.06:604,39,0	0/0:17,0:17:48.16:0,48,631	0/0:26,0:26:75.24:0,75,984	1/1:8,21:30:75.20:1167,75,0	0/0:19,0:19:54.15:0,54,682	0/0:21,0:21:60.18:0,60,763	0/0:8,0:8:24.06:0,24,292	0/0:35,0:35:90.28:0,90,1168	0/0:26,0:26:72.16:0,72,909	0/0:26,0:26:60.17:0,60,760	0/0:24,0:23:57.17:0,57,735	0/0:28,0:28:75.23:0,75,972	1/1:7,29:36:84.29:1422,84,0	0/0:16,0:16:48.16:0,48,628	0/0:27,0:27:69.17:0,69,851	0/0:16,0:16:42.12:0,42,537	0/0:41,0:41:99:0,117,1524	0/0:13,0:13:33.11:0,33,433	0/0:11,0:11:33.09:0,33,415	0/0:26,0:26:75.20:0,75,965	0/0:17,0:17:44.83:0,45,526	0/0:16,0:16:48.14:0,48,605	0/0:21,0:21:60.20:0,60,788	0/0:11,0:11:33.11:0,33,433
chr10	58176417	.	A	AG	5827.30	PASS	AB=1.000;AC=12;AF=0.214;AN=56;BaseQRankSum=6.618;DP=711;FS=1.561;HRun=1;HaplotypeScore=102.3562;InbreedingCoeff=0.7840;MQ=73.28;MQ0=1;MQRankSum=-2.761;QD=32.55;ReadPosRankSum=-1.391;VQSLOD=4.2563;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,48:48:99:2023,135,0	1/1:2,12:14:36.12:539,36,0	0/1:19,0:19:24.15:24,0,448	0/1:17,0:17:29.31:29,0,391	1/1:2,18:20:42.14:629,42,0	0/0:16,0:15:39.13:0,39,500	0/0:22,0:22:66.19:0,66,829	1/1:5,23:28:78.21:1110,78,0	0/0:28,0:28:84.23:0,84,1047	0/0:28,0:28:81.25:0,81,1036	0/0:16,0:16:43.69:0,44,535	0/0:38,0:38:99:0,111,1427	0/0:32,0:32:93.29:0,93,1194	0/0:30,0:30:90.26:0,90,1139	0/0:35,0:35:99:0,105,1334	0/0:34,0:34:96.31:0,96,1247	1/1:0,33:33:99:1472,99,0	0/0:28,0:28:81.19:0,81,1014	0/0:21,0:21:57.18:0,57,739	0/0:6,0:6:18.05:0,18,220	0/0:58,0:57:99:0,163,2076	0/0:24,0:24:69.20:0,69,879	0/0:15,0:15:39.13:0,39,504	0/0:39,0:39:99:0,108,1397	0/0:20,0:20:57.19:0,57,740	0/0:20,0:20:57.18:0,57,740	0/0:17,0:17:51.15:0,51,648	0/0:5,0:5:15.05:0,15,195
chr10	58176869	.	G	GC	22148.66	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-7.180;DP=793;FS=2.113;HRun=3;HaplotypeScore=107.1468;InbreedingCoeff=0.9990;MQ=90.95;MQ0=0;MQRankSum=-7.368;QD=37.80;ReadPosRankSum=0.956;VQSLOD=4.3511;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:65,0:65:99:0,187,2204	1/1:0,7:7:21.07:294,21,0	0/0:31,0:31:76.56:0,77,960	0/0:33,0:33:84.60:0,85,996	0/0:23,0:23:66.20:0,66,785	1/1:2,20:22:57.19:798,57,0	1/1:1,21:22:57.19:798,57,0	1/1:6,25:31:75.22:1007,75,0	1/1:2,24:26:69.23:965,69,0	1/1:1,28:29:84.24:1151,84,0	1/1:1,16:17:45.15:628,45,0	1/1:3,25:28:75.16:1005,75,0	0/0:34,0:34:96.25:0,96,1135	0/0:21,0:21:60.18:0,60,717	1/1:1,32:33:87.29:1217,87,0	1/1:3,23:26:69.23:964,69,0	1/1:1,53:54:99:2215,160,0	1/1:0,33:33:93.31:1301,93,0	1/1:2,19:21:60.07:763,60,0	1/1:0,27:27:81.27:1132,81,0	1/1:1,41:42:99:1679,120,0	1/1:2,29:31:87.29:1217,87,0	1/1:1,22:23:57.19:796,57,0	1/1:0,26:26:66.22:923,66,0	1/1:2,24:26:66.22:922,66,0	1/1:1,30:32:93.27:1258,93,0	1/1:1,20:21:54.16:736,54,0	1/1:0,9:9:27.09:378,27,0
chr10	58178251	.	ACT	A	9404.36	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=11.167;DP=587;FS=2.726;HRun=0;HaplotypeScore=83.0938;InbreedingCoeff=0.9998;MQ=86.05;MQ0=1;MQRankSum=-1.466;QD=39.35;ReadPosRankSum=4.055;VQSLOD=6.6285;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,117,2144	0/0:13,0:13:39.12:0,39,689	0/0:20,0:20:51.17:0,51,905	0/0:21,0:21:41.29:0,41,878	0/0:20,0:20:60.21:0,60,1116	0/0:10,0:10:30.09:0,30,530	0/0:18,0:18:54.19:0,54,1011	0/0:37,0:37:99:0,105,1848	1/1:0,19:19:51.17:751,51,0	1/1:0,21:21:63.18:882,63,0	1/1:1,15:16:36.12:530,36,0	0/0:18,0:18:54.17:0,54,979	0/0:16,0:16:48.15:0,48,867	0/0:11,0:11:33.11:0,33,618	1/1:0,28:28:66.22:970,66,0	0/0:14,0:14:42.12:0,42,724	0/0:34,0:34:99:0,99,1834	0/0:18,0:18:54.17:0,54,951	1/1:1,19:20:57.16:800,57,0	1/1:1,24:25:69.23:1016,69,0	1/1:0,35:34:96.32:1413,96,0	0/0:21,0:21:63.22:0,63,1157	0/0:15,0:15:45.14:0,45,811	0/0:22,0:22:63.20:0,63,1147	1/1:1,16:17:42.14:618,42,0	1/1:0,14:14:42.14:615,42,0	1/1:2,31:33:90.30:1323,90,0	1/1:0,11:11:33.11:486,33,0
chr10	58178933	.	GC	G	571.38	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.999;DP=602;FS=0.000;HRun=7;HaplotypeScore=71.6780;InbreedingCoeff=0.9392;MQ=75.95;MQ0=0;MQRankSum=-8.291;QD=10.58;ReadPosRankSum=-1.530;VQSLOD=1.5169;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,2:48:83.21:0,83,1643	1/1:2,11:13:28.92:160,29,0	0/0:25,0:25:51.08:0,51,665	0/0:14,0:14:34.07:0,34,348	0/0:15,0:15:42.13:0,42,528	0/0:26,0:26:72.23:0,72,904	0/0:30,0:30:87.26:0,87,1074	1/1:11,14:25:47.66:357,48,0	0/0:17,0:17:42.13:0,42,528	0/0:21,0:21:50.88:0,51,629	0/0:23,0:23:66.21:0,66,822	0/0:23,0:23:66.20:0,66,817	0/0:18,0:18:54.17:0,54,679	0/0:24,0:24:63.20:0,63,782	0/0:21,0:21:57.17:0,57,704	0/0:20,0:20:60.18:0,60,742	1/1:3,13:16:34.88:197,35,0	0/0:17,0:17:48.13:0,48,589	0/0:14,0:14:3.20:0,3,288	0/0:18,0:18:45.14:0,45,563	0/0:29,0:29:84.27:0,84,1054	0/0:23,0:23:60.18:0,60,741	0/0:14,0:14:39.11:0,39,477	0/0:35,0:35:96.26:0,96,1187	0/0:25,0:25:66.20:0,66,817	0/0:16,0:16:48.15:0,48,603	0/0:25,0:25:75.24:0,75,940	0/0:6,0:6:18.06:0,18,226
chr10	58178941	.	ACCCCCG	A	2233.39	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=11.117;DP=605;FS=3.205;HRun=0;HaplotypeScore=130.4588;InbreedingCoeff=0.9962;MQ=78.54;MQ0=0;MQRankSum=-8.555;QD=38.51;ReadPosRankSum=-2.598;VQSLOD=2.9880;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,144,4718	1/1:3,11:14:40.81:675,41,0	0/0:29,0:29:84.19:0,84,2220	0/0:16,0:15:37.99:0,38,1213	0/0:17,0:17:51.11:0,51,1520	0/0:27,0:27:81.21:0,81,2594	0/0:30,0:30:90.18:0,90,2790	1/1:6,21:27:81.10:1236,81,0	0/0:16,0:16:48.04:0,48,1521	0/0:17,0:17:48.07:0,48,1778	0/0:24,0:24:72.20:0,72,2289	0/0:21,0:21:63.15:0,63,1906	0/0:19,0:19:57.18:0,57,2028	0/0:21,0:21:62.14:0,62,2046	0/0:19,0:19:57.20:0,57,2057	0/0:21,0:21:63.21:0,63,2180	1/1:4,13:17:32.29:465,32,0	0/0:19,0:19:57.13:0,57,1803	0/0:9,0:9:24.07:0,24,730	0/0:17,0:17:45.10:0,45,1543	0/0:28,0:28:83.92:0,84,2839	0/0:21,0:21:63.16:0,63,1971	0/0:13,0:13:39.13:0,39,1259	0/0:31,0:31:93.28:0,93,3178	0/0:28,0:28:84.20:0,84,2501	0/0:18,0:18:51.01:0,51,1705	0/0:28,0:28:84.20:0,84,2736	0/0:6,0:6:18.06:0,18,671
chr10	58180932	.	A	AGG	29820.45	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=-7.039;DP=794;FS=2.145;HRun=2;HaplotypeScore=101.5955;InbreedingCoeff=0.9998;MQ=88.43;MQ0=1;MQRankSum=-6.602;QD=50.20;ReadPosRankSum=4.582;VQSLOD=4.6683;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,57:60:99:2865,154,0	0/0:14,0:14:42.14:0,42,618	0/0:23,0:23:60.09:0,60,804	0/0:36,0:36:99:0,105,1438	1/1:0,27:27:72.25:1349,72,0	1/1:1,24:25:66.23:1219,66,0	1/1:2,34:36:87.28:1629,87,0	0/0:25,0:25:69.20:0,69,961	1/1:0,33:34:99:1851,99,0	1/1:2,24:26:69.24:1287,69,0	1/1:0,19:19:54.19:1008,54,0	1/1:0,23:23:63.22:1180,63,0	0/0:34,0:34:90.30:0,90,1313	0/0:30,0:30:87.28:0,87,1261	1/1:0,37:37:99:1967,105,0	1/1:1,22:23:60.21:1124,60,0	0/0:38,0:38:99:0,108,1564	1/1:1,39:40:99:1883,102,0	1/1:4,18:22:60.21:1122,60,0	1/1:0,25:25:75.26:1404,75,0	1/1:3,41:46:99:2206,120,0	1/1:1,26:28:75.26:1405,75,0	1/1:0,18:18:49.72:903,50,0	1/1:1,32:33:90.31:1684,90,0	1/1:0,23:23:60.21:1124,60,0	1/1:2,22:24:72.24:1318,72,0	1/1:1,14:15:42.14:787,42,0	1/1:0,9:9:27.09:506,27,0
chr10	58182102	.	GGT	G	1335.27	PASS	AB=0.905;AC=42;AF=0.840;AN=50;BaseQRankSum=4.164;DP=641;FS=0.000;HRun=0;HaplotypeScore=114.4051;InbreedingCoeff=0.1188;MQ=66.19;MQ0=1;MQRankSum=-0.945;QD=2.69;ReadPosRankSum=0.583;VQSLOD=1.7737;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:40:8.87:35,9,0	1/1:9,0:12:2.84:14,3,0	./.	./.	1/1:14,0:19:2.13:12,2,0	1/1:12,0:16:8.05:36,8,0	1/1:16,0:25:9.48:44,9,0	0/0:31,0:31:2.90:0,3,16	1/1:21,5:26:3.85:118,4,0	1/1:22,3:25:9.02:96,9,0	1/1:18,1:19:12.01:120,12,0	1/1:21,0:27:22.26:103,22,0	0/0:22,0:22:23.63:0,24,274	0/1:31,2:33:67.71:68,0,181	1/1:16,4:20:18.04:192,18,0	0/1:29,2:30:31:31,0,120	1/1:14,0:24:11.83:56,12,0	1/1:9,0:9:2.84:14,3,0	1/1:16,2:18:6.01:64,6,0	1/1:19,5:23:9.02:97,9,0	./.	1/1:15,0:19:8.36:39,8,0	1/1:8,0:8:2.04:6,2,0	1/1:38,0:40:2.30:19,2,0	1/1:11,1:13:5.85:46,6,0	0/1:21,4:26:9.07:125,0,9	0/1:16,1:18:27.75:99,0,28	1/1:0,2:2:3.01:32,3,0
chr10	58182438	.	TTGTGTG	T	13285.06	PASS	AB=0.625;AC=47;AF=0.839;AN=56;BaseQRankSum=9.165;DP=605;FS=4.666;HRun=0;HaplotypeScore=190.6091;InbreedingCoeff=0.7994;MQ=58.09;MQ0=4;MQRankSum=-10.418;QD=26.73;ReadPosRankSum=0.748;VQSLOD=4.3645;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:38:60.20:837,60,0	1/1:1,0:3:6.02:84,6,0	0/0:29,0:17:20.75:0,21,632	0/0:26,0:23:54.18:0,54,1519	1/1:2,0:22:14.94:210,15,0	1/1:5,0:23:48.16:667,48,0	1/1:6,0:10:9:105,9,0	1/1:10,0:27:37.01:505,37,0	1/1:5,20:25:48.12:981,48,0	1/1:4,9:14:24.08:491,24,0	1/1:8,13:21:39.16:434,39,0	1/1:3,0:17:39.11:525,39,0	0/0:20,0:23:60.19:0,60,1750	0/0:28,0:29:72.25:0,72,2254	1/1:8,23:32:57.06:1063,57,0	1/1:7,1:30:57.19:818,57,0	1/1:7,0:19:27.09:376,27,0	1/1:4,0:14:24.08:334,24,0	0/1:6,9:15:18.89:349,0,19	1/1:2,28:28:71.87:1118,72,0	1/1:12,11:24:22.61:306,23,0	1/1:2,0:13:15.02:189,15,0	1/1:4,0:15:24.08:335,24,0	1/1:9,0:23:24.08:334,24,0	1/1:7,16:23:45.02:829,45,0	1/1:11,15:29:51.17:987,51,0	1/1:3,21:25:63.17:1279,63,0	1/1:2,2:4:6.02:128,6,0
chr10	58183449	.	TC	T	14272.72	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=4.789;DP=639;FS=7.650;HRun=7;HaplotypeScore=105.0391;InbreedingCoeff=0.9918;MQ=84.73;MQ0=0;MQRankSum=-5.919;QD=25.53;ReadPosRankSum=3.288;VQSLOD=4.7162;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,39:46:99:1101,108,0	1/1:0,17:17:48.11:489,48,0	0/0:17,0:17:45.13:0,45,539	0/0:25,0:25:42.26:0,42,533	1/1:2,26:28:78.17:795,78,0	1/1:1,20:21:54.12:551,54,0	1/1:4,23:27:63.11:643,63,0	1/1:3,17:20:48.11:490,48,0	1/1:3,19:22:57.13:581,57,0	1/1:1,19:20:57.09:569,57,0	1/1:2,19:21:51.11:520,51,0	1/1:3,27:30:78.14:786,78,0	0/0:21,0:21:48.15:0,48,603	0/0:17,0:17:45.13:0,45,553	1/1:1,15:16:36.08:367,36,0	1/1:0,14:14:39.09:398,39,0	1/1:2,29:31:81.18:826,81,0	1/1:1,24:25:60.14:612,60,0	1/1:5,16:21:45.07:450,45,0	1/1:0,20:20:57.12:578,57,0	1/1:2,23:25:57.13:582,57,0	1/1:1,24:25:66.15:673,66,0	1/1:3,25:28:69.16:704,69,0	1/1:4,19:23:51.11:520,51,0	1/1:3,17:20:51.11:520,51,0	1/1:1,19:20:57.07:564,57,0	1/1:0,24:24:63.14:642,63,0	1/1:4,11:15:12.24:313,12,0
chr10	58184795	.	A	AT	6846.99	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-15.987;DP=512;FS=1.116;HRun=6;HaplotypeScore=60.7338;InbreedingCoeff=0.9984;MQ=89.16;MQ0=0;MQRankSum=-2.402;QD=32.92;ReadPosRankSum=1.324;VQSLOD=5.0485;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:51.09:0,51,512	0/0:13,0:13:39.09:0,39,398	0/0:23,0:23:61.89:0,62,596	0/0:15,1:16:29.96:0,30,277	0/0:20,0:20:54.07:0,54,536	0/0:23,0:23:63.11:0,63,629	0/0:13,0:13:39.07:0,39,390	0/0:28,0:28:75.14:0,75,750	1/1:1,19:20:51.16:642,51,0	1/1:0,18:18:54.16:665,54,0	1/1:0,18:18:51.04:603,51,0	0/0:16,0:16:39.09:0,39,398	0/0:14,0:14:33.06:0,33,329	0/0:18,0:18:45.08:0,45,452	1/1:0,17:17:51.16:642,51,0	0/0:16,0:16:48.11:0,48,490	0/0:8,0:8:18.04:0,18,184	0/0:13,0:13:36.04:0,36,357	1/1:3,17:20:54.10:608,54,0	1/1:2,20:22:60.15:737,60,0	1/1:1,17:18:39.12:491,39,0	0/0:20,0:20:57.11:0,57,575	0/0:26,0:26:69.11:0,69,688	0/0:18,0:18:51.10:0,51,513	1/1:2,17:19:51.16:642,51,0	1/1:2,22:24:66.17:800,66,0	1/1:1,22:23:57.18:717,57,0	1/1:1,8:9:24.08:302,24,0
chr10	58185362	.	CT	C	10873.09	PASS	AB=0.833;AC=49;AF=0.875;AN=56;BaseQRankSum=5.030;DP=583;FS=2.348;HRun=10;HaplotypeScore=80.7296;InbreedingCoeff=0.8342;MQ=69.42;MQ0=0;MQRankSum=-2.564;QD=20.59;ReadPosRankSum=2.222;VQSLOD=5.8163;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,12:12:35.99:312,36,0	1/1:1,8:9:20.99:182,21,0	0/0:12,0:13:29.51:0,30,265	0/1:8,2:10:37.45:37,0,159	1/1:3,27:30:74.97:651,75,0	1/1:4,18:23:53:449,53,0	1/1:1,12:14:35.03:292,35,0	1/1:10,24:34:68.97:599,69,0	1/1:2,13:15:38.99:339,39,0	1/1:4,20:24:59.98:521,60,0	1/1:4,26:30:74.95:648,75,0	1/1:4,15:19:41.99:365,42,0	0/0:21,0:21:63.11:0,63,668	0/0:21,0:21:60.16:0,60,657	1/1:3,26:29:44.80:618,45,0	1/1:1,20:21:26.81:461,27,0	1/1:4,15:19:44.98:391,45,0	1/1:3,13:17:29.02:240,29,0	1/1:5,17:23:53:449,53,0	1/1:3,26:30:73.95:624,74,0	1/1:5,12:17:35.99:312,36,0	1/1:2,16:18:41.98:365,42,0	1/1:1,30:31:86.96:755,87,0	1/1:2,14:17:38.03:319,38,0	1/1:1,15:16:41.99:364,42,0	1/1:3,26:29:44.79:618,45,0	1/1:1,30:31:86.97:755,87,0	1/1:2,8:10:23.97:208,24,0
chr10	58186457	.	GC	G	1102.94	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=4.659;DP=633;FS=4.101;HRun=6;HaplotypeScore=150.2983;InbreedingCoeff=0.9775;MQ=64.68;MQ0=8;MQRankSum=1.298;QD=17.79;ReadPosRankSum=0.866;VQSLOD=2.0732;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,31:35:59.95:644,60,0	0/0:9,0:9:27.07:0,27,329	0/0:46,3:33:45.14:0,45,846	0/0:43,0:23:38.66:0,39,481	1/1:1,25:26:54.13:581,54,0	0/0:22,0:22:35.94:0,36,453	0/0:22,0:22:54.63:0,55,711	0/0:24,0:24:69.22:0,69,907	0/0:23,0:23:42.14:0,42,549	0/0:23,0:23:69.22:0,69,892	0/0:11,0:11:30.09:0,30,379	0/0:22,0:22:54.17:0,54,700	0/0:10,0:10:27.08:0,27,342	0/0:17,0:17:45.15:0,45,589	0/0:25,0:25:36.07:0,36,454	0/0:21,0:21:51.17:0,51,668	0/0:22,0:22:42.09:0,42,533	0/0:7,0:7:18.06:0,18,237	0/0:21,0:21:51.17:0,51,665	0/0:25,0:25:54.17:0,54,706	0/0:43,0:43:57.07:0,57,736	0/0:21,0:21:39.08:0,39,491	0/0:16,0:16:24.03:0,24,314	0/0:34,0:33:57.56:0,58,697	0/0:16,0:16:33.10:0,33,419	0/0:24,0:24:60.19:0,60,787	0/0:15,0:15:33.11:0,33,428	0/0:5,0:5:12.04:0,12,158
chr10	58186490	.	TGTGTGTGTGTGTGTGA	T	2924.89	PASS	AB=0.985;AC=22;AF=0.393;AN=56;BaseQRankSum=1.723;DP=582;FS=14.899;HRun=0;HaplotypeScore=217.1509;InbreedingCoeff=0.0860;MQ=51.18;MQ0=26;MQRankSum=-3.147;QD=9.44;ReadPosRankSum=-0.845;VQSLOD=1.2840;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:36,0:35:30.35:30,0,1009	0/0:6,0:6:9.03:0,9,341	0/0:26,0:4:3.01:0,3,32	0/0:33,0:10:11.75:0,12,296	0/1:20,0:20:23.15:23,0,509	0/0:24,0:23:7.68:0,8,18	0/0:21,0:20:23.40:0,23,285	0/1:23,0:21:15.55:16,0,403	1/1:14,1:15:12.51:346,13,0	0/1:23,0:22:99:283,0,162	1/1:6,2:8:4.82:166,5,0	0/1:22,0:22:23.13:23,0,155	0/0:14,0:13:33.08:0,33,1684	0/0:12,0:12:30.09:0,30,1565	1/1:27,0:27:19.31:499,19,0	0/1:15,1:16:54.68:266,0,55	0/0:26,0:25:14.63:0,15,265	0/0:13,0:13:3.86:0,4,556	1/1:24,1:22:4.37:526,4,0	0/1:25,0:25:33.12:174,0,33	0/0:46,0:44:11.97:0,12,96	0/1:15,0:15:7.96:8,0,202	0/0:23,0:22:4.71:0,5,78	0/0:26,1:25:0.27:0,0,164	0/1:16,0:15:8.08:8,0,10	0/1:17,2:18:17.09:349,0,17	1/1:10,0:10:3.48:77,3,0	1/1:10,0:10:12.04:302,12,0
chr10	58186492	.	TGTGTGTGTGTGTGA	T	4831.54	PASS	AB=0.986;AC=28;AF=0.519;AN=54;BaseQRankSum=1.519;DP=570;FS=8.227;HRun=0;HaplotypeScore=192.1579;InbreedingCoeff=0.1449;MQ=51.39;MQ0=25;MQRankSum=-3.531;QD=12.82;ReadPosRankSum=-0.807;VQSLOD=3.0815;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:34,0:33:36.03:36,0,735	0/0:6,0:6:9.03:0,9,263	0/0:22,0:2:2.98:0,3,22	0/0:31,0:9:6.67:0,7,240	0/1:21,0:21:45.11:45,0,338	1/1:24,0:23:17.93:139,18,0	0/1:22,0:21:51.06:51,0,67	0/1:21,0:20:65.30:65,0,244	1/1:3,12:15:12.04:449,12,0	0/1:21,2:22:92.47:560,0,92	1/1:10,0:10:14.70:174,15,0	0/1:21,0:21:51.61:114,0,52	0/0:13,0:12:33.06:0,33,1442	0/0:13,0:13:33.09:0,33,1358	1/1:3,23:26:19.31:713,19,0	0/1:14,1:15:29.12:330,0,29	0/0:26,0:25:11.41:0,11,139	0/1:13,0:12:2.33:2,0,367	1/1:12,13:22:24.30:759,24,0	1/1:7,17:24:8.92:260,9,0	./.	0/1:15,0:15:8.11:8,0,100	0/0:23,0:22:2.34:0,2,27	0/1:28,0:26:65.54:66,0,100	0/0:6,10:15:2.94:0,3,22	1/1:18,1:18:30.01:455,30,0	1/1:4,6:10:3.01:122,3,0	1/1:0,10:10:12.04:485,12,0
chr10	58186494	.	TGTGTGTGTGTGA	T	4618.84	PASS	AB=0.984;AC=34;AF=0.654;AN=52;BaseQRankSum=1.621;DP=560;FS=0.000;HRun=0;HaplotypeScore=175.4135;InbreedingCoeff=0.3620;MQ=51.40;MQ0=25;MQRankSum=-2.795;QD=11.66;ReadPosRankSum=-1.652;VQSLOD=3.5097;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:32,0:31:37.03:37,0,519	0/0:5,0:5:8.98:0,9,184	0/0:22,0:2:5.97:0,6,44	0/0:31,0:8:11.66:0,12,197	0/1:22,0:22:70.27:70,0,139	1/1:24,0:23:18.06:296,18,0	1/1:21,0:20:4.05:162,4,0	0/1:23,0:21:52.20:132,0,52	1/1:15,0:15:12.04:334,12,0	1/1:22,0:21:26.93:410,27,0	1/1:10,0:10:8.95:118,9,0	0/1:17,2:19:0.14:178,0,0	0/0:13,0:12:30.06:0,30,1201	0/0:13,0:13:30.06:0,30,1088	1/1:26,0:26:19.31:532,19,0	1/1:7,8:15:11.60:388,12,0	0/1:26,0:25:31.15:31,0,42	0/1:13,0:12:66.30:66,0,196	1/1:25,0:22:40.43:632,40,0	1/1:24,0:24:8.94:193,9,0	./.	1/1:15,0:15:11.91:83,12,0	0/0:24,0:23:0.14:0,0,2	1/1:28,0:26:18.40:189,18,0	./.	1/1:17,0:16:26.28:329,26,0	1/1:9,0:9:3.01:89,3,0	1/1:10,0:10:12.04:351,12,0
chr10	58186496	.	TGTGTGTGTGA	T	5373.58	PASS	AB=1.000;AC=39;AF=0.750;AN=52;BaseQRankSum=1.494;DP=551;FS=2.132;HRun=0;HaplotypeScore=157.7121;InbreedingCoeff=0.3524;MQ=51.35;MQ0=24;MQRankSum=-1.589;QD=12.86;ReadPosRankSum=-1.977;VQSLOD=3.0711;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:32,0:31:84.60:85,0,289	0/1:4,0:4:15.94:16,0,84	0/0:24,0:4:5.13:0,5,63	0/0:29,0:8:14.78:0,15,178	0/1:22,0:22:47.79:101,0,48	1/1:6,18:23:18.06:565,18,0	1/1:21,1:21:21.74:352,22,0	1/1:25,0:23:18.98:241,19,0	1/1:14,0:14:12.04:279,12,0	1/1:21,0:20:17.69:357,18,0	1/1:10,0:10:14.63:145,15,0	1/1:16,3:19:23.44:340,23,0	0/0:13,0:12:30.04:0,30,1031	0/0:12,0:12:36.06:0,36,982	1/1:26,0:26:19.31:448,19,0	0/1:13,0:13:18.46:279,0,18	1/1:27,0:26:6.61:93,7,0	0/1:13,0:12:99:148,0,123	1/1:25,0:22:41.71:565,42,0	1/1:22,0:22:8.92:165,9,0	./.	1/1:13,2:15:3.95:116,4,0	1/1:4,20:23:3.63:43,4,0	1/1:26,2:26:17.49:368,17,0	./.	1/1:16,0:15:24.54:297,25,0	1/1:6,0:6:3.01:75,3,0	1/1:10,0:10:12.04:295,12,0
chr10	58186498	.	TGTGTGTGA	T	4842.22	PASS	AB=1.000;AC=40;AF=0.769;AN=52;BaseQRankSum=1.977;DP=552;FS=2.921;HRun=0;HaplotypeScore=147.7018;InbreedingCoeff=0.4269;MQ=51.40;MQ0=24;MQRankSum=-3.301;QD=11.64;ReadPosRankSum=-1.734;VQSLOD=3.4899;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:32:90.74:147,0,91	0/1:4,0:4:15.96:16,0,56	0/0:25,0:4:5.13:0,5,63	0/0:29,0:8:14.76:0,15,119	1/1:22,0:22:4.88:167,5,0	1/1:23,1:23:18.06:373,18,0	1/1:23,0:22:12.54:276,13,0	1/1:24,0:22:31.42:298,31,0	1/1:14,0:14:12.04:223,12,0	1/1:19,0:18:11.96:300,12,0	1/1:12,0:12:20.69:180,21,0	1/1:19,0:19:23.97:270,24,0	0/0:15,0:14:36.04:0,36,931	0/0:13,0:13:36.52:0,37,847	1/1:25,0:25:19.31:364,19,0	0/1:13,0:13:10.37:223,0,10	1/1:24,2:25:15:235,15,0	0/1:13,0:12:57.54:121,0,58	1/1:23,0:20:42.81:497,43,0	1/1:21,0:21:8.94:137,9,0	./.	1/1:15,1:16:6.49:115,6,0	1/1:24,0:23:2.65:10,3,0	1/1:28,0:26:26.88:309,27,0	./.	1/1:17,0:16:20.86:282,21,0	1/1:6,0:6:3.01:61,3,0	1/1:10,0:10:12.04:239,12,0
chr10	58186500	.	TGTGTGA	T	4676.42	PASS	AB=1.000;AC=40;AF=0.769;AN=52;BaseQRankSum=2.699;DP=549;FS=3.120;HRun=0;HaplotypeScore=137.1276;InbreedingCoeff=0.5485;MQ=51.57;MQ0=23;MQRankSum=-1.891;QD=11.35;ReadPosRankSum=-0.712;VQSLOD=3.8237;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:31,0:31:29.16:292,29,0	0/1:4,0:4:10.53:21,0,11	0/0:26,0:5:5.13:0,5,63	0/0:30,0:7:17.61:0,18,133	1/1:22,0:22:26.81:233,27,0	1/1:23,0:22:17.93:291,18,0	1/1:26,0:25:24.61:339,25,0	1/1:23,0:21:30.92:272,31,0	1/1:14,0:14:12.02:167,12,0	1/1:19,0:19:21.53:292,22,0	1/1:12,0:12:20.71:166,21,0	1/1:19,0:19:30.44:291,30,0	0/0:16,0:15:38.62:0,39,782	0/0:13,0:13:36.93:0,37,705	1/1:25,0:25:18.53:278,19,0	0/1:13,0:13:10.48:167,0,10	1/1:7,19:25:15.03:259,15,0	0/1:13,0:12:34.37:130,0,34	1/1:21,0:19:43.34:429,43,0	1/1:21,0:21:8.94:109,9,0	./.	1/1:16,0:16:6.48:114,6,0	0/1:23,0:22:0.23:0,0,1	1/1:28,0:26:26.50:252,27,0	./.	1/1:17,0:16:38.57:344,39,0	1/1:6,0:6:2.99:47,3,0	1/1:10,0:10:12.04:183,12,0
chr10	58186502	.	TGTGA	T	4438.12	PASS	AB=1.000;AC=43;AF=0.796;AN=54;BaseQRankSum=3.916;DP=538;FS=1.310;HRun=0;HaplotypeScore=123.9786;InbreedingCoeff=0.5658;MQ=51.60;MQ0=23;MQRankSum=-0.815;QD=10.18;ReadPosRankSum=0.189;VQSLOD=4.3063;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:28,4:32:47.44:506,47,0	1/1:5,0:5:9.46:76,9,0	0/0:27,0:6:1.30:0,1,57	0/0:31,0:9:20.62:0,21,166	1/1:19,3:22:32.66:304,33,0	1/1:23,0:22:18.05:208,18,0	1/1:25,0:24:25.68:348,26,0	1/1:22,0:20:15.91:283,16,0	1/1:13,0:13:11.89:113,12,0	1/1:19,0:19:24.53:289,25,0	1/1:13,0:13:23.72:179,24,0	1/1:17,0:17:29.97:262,30,0	0/0:18,0:17:44.62:0,45,686	0/0:13,0:13:16.08:0,16,560	1/1:24,0:24:18.05:194,18,0	0/1:12,0:12:10.30:112,0,10	1/1:23,0:22:15.03:166,15,0	0/1:13,0:12:15.98:141,0,16	1/1:21,0:19:27.51:338,28,0	1/1:20,0:20:8.75:81,9,0	0/1:35,0:33:0:0,0,0	1/1:15,0:15:6.48:114,6,0	1/1:22,0:21:2.85:20,3,0	1/1:27,0:26:25.04:201,25,0	./.	1/1:17,0:16:41.57:344,42,0	1/1:6,0:6:2.90:32,3,0	1/1:10,0:10:12.03:128,12,0
chr10	58186504	.	TGA	T	3968.47	PASS	AB=1.000;AC=44;AF=0.815;AN=54;BaseQRankSum=4.204;DP=521;FS=1.273;HRun=0;HaplotypeScore=111.8834;InbreedingCoeff=0.6749;MQ=52.14;MQ0=21;MQRankSum=-1.489;QD=9.36;ReadPosRankSum=0.521;VQSLOD=2.9904;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:31,0:31:50.56:395,51,0	1/1:5,0:5:11.99:100,12,0	0/0:26,0:7:4.30:0,4,88	0/0:30,0:10:23.57:0,24,184	1/1:22,1:23:35.65:291,36,0	1/1:21,2:22:17.70:124,18,0	1/1:24,1:24:29.34:382,29,0	1/1:22,0:20:17.94:310,18,0	1/1:13,0:13:11.70:73,12,0	1/1:17,0:17:24.42:261,24,0	1/1:13,0:13:23.78:175,24,0	1/1:17,0:17:32.88:258,33,0	0/0:18,0:17:44.62:0,45,546	0/0:13,0:13:16.07:0,16,445	1/1:24,0:24:17.65:110,18,0	0/1:11,0:11:10.25:57,0,10	1/1:23,0:22:14.91:110,15,0	1/1:13,0:12:7.98:166,8,0	1/1:20,0:18:15.66:254,16,0	1/1:18,0:18:8.77:56,9,0	0/1:29,0:27:0:0,0,0	1/1:17,0:17:12.48:164,12,0	1/1:22,0:21:2.95:19,3,0	1/1:24,1:24:26.36:201,26,0	./.	1/1:17,0:16:47.44:371,47,0	1/1:6,0:6:2.89:19,3,0	1/1:10,0:10:11.80:73,12,0
chr10	58188676	.	A	AT	28178.62	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=10.656;DP=802;FS=8.789;HRun=1;HaplotypeScore=139.7268;InbreedingCoeff=0.9999;MQ=90.29;MQ0=0;MQRankSum=-8.090;QD=41.38;ReadPosRankSum=4.767;VQSLOD=3.2026;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,44:48:99:1933,129,0	1/1:0,13:13:39.13:584,39,0	0/0:30,0:30:90.27:0,90,1137	0/0:33,0:33:93.29:0,93,1172	1/1:1,34:35:99:1483,99,0	1/1:0,16:16:48.16:719,48,0	1/1:1,20:21:57.19:854,57,0	1/1:3,29:32:78.25:1148,78,0	1/1:0,22:22:60.20:898,60,0	1/1:0,40:40:99:1779,120,0	1/1:1,26:27:75.25:1123,75,0	1/1:0,27:27:78.26:1169,78,0	0/0:28,0:28:81.26:0,81,1051	0/0:30,0:30:90.28:0,90,1156	1/1:1,29:29:84.28:1259,84,0	1/1:0,28:28:75.25:1124,75,0	1/1:0,30:30:84.28:1259,84,0	1/1:4,11:15:33.11:494,33,0	1/1:4,27:31:87.28:1273,87,0	1/1:1,42:43:99:1789,126,0	1/1:1,50:52:99:2120,144,0	1/1:0,31:31:90.26:1317,90,0	1/1:1,23:24:69.23:1034,69,0	1/1:0,21:21:60.20:899,60,0	1/1:0,28:28:81.27:1214,81,0	1/1:1,21:22:66.16:938,66,0	1/1:1,30:31:84.12:1228,84,0	1/1:0,14:14:36.12:539,36,0
chr10	58200848	.	CAA	C	674.11	PASS	AB=0.710;AC=8;AF=0.167;AN=48;BaseQRankSum=4.023;DP=150;FS=2.310;HRun=2;HaplotypeScore=30.8258;InbreedingCoeff=-0.0172;MQ=49.94;MQ0=2;MQRankSum=-3.283;QD=11.83;ReadPosRankSum=-0.649;VQSLOD=0.4933;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:12:36.12:0,36,703	./.	0/0:3,0:2:5.99:0,6,82	0/0:3,0:3:6.02:0,6,117	0/0:2,0:2:3.01:0,3,61	1/1:0,5:4:12.04:195,12,0	0/1:4,6:8:99:174,0,121	0/0:12,0:8:24.08:0,24,487	0/0:7,0:7:21.07:0,21,421	0/1:1,1:2:42.65:43,0,55	0/0:2,1:1:3.01:0,3,61	0/0:7,0:6:18.06:0,18,365	0/0:3,0:3:9.03:0,9,183	0/0:3,0:3:6.02:0,6,122	0/1:4,4:7:99:125,0,223	0/1:5,5:9:99:174,0,161	0/1:9,3:12:64.24:64,0,515	0/0:5,0:5:12.04:0,12,213	0/0:7,0:6:15.05:0,15,305	./.	0/0:3,0:3:9.03:0,9,183	./.	./.	0/1:8,2:9:30.14:30,0,287	0/0:9,0:9:24.08:0,24,487	0/0:3,0:2:6.02:0,6,122	0/0:4,0:4:12.04:0,12,244	0/0:6,0:5:15.05:0,15,305
chr10	58200856	.	T	TA	649.85	PASS	AB=0.930;AC=19;AF=0.396;AN=48;BaseQRankSum=-1.623;DP=171;FS=1.470;HRun=13;HaplotypeScore=35.1321;InbreedingCoeff=0.6137;MQ=54.06;MQ0=2;MQRankSum=-1.201;QD=6.19;ReadPosRankSum=-3.005;VQSLOD=0.4361;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:11,4:14:0.45:98,0,0	./.	0/0:4,0:3:5.88:0,6,36	0/0:4,0:4:8.85:0,9,57	0/1:2,0:2:0:0,0,0	1/1:5,0:4:0.08:0,0,0	1/1:7,2:9:3.95:30,4,0	1/1:6,10:14:12.42:250,12,0	0/0:7,0:7:11.82:0,12,82	0/0:2,0:2:2.94:0,3,21	0/1:3,0:1:0:0,0,0	1/1:5,1:6:6.79:44,7,0	0/0:3,0:3:8.93:0,9,62	0/0:3,0:3:5.95:0,6,41	0/0:7,0:8:11.27:0,11,68	1/1:10,0:10:3.33:16,3,0	1/1:8,7:15:26.92:231,27,0	1/1:0,1:6:11.53:71,12,0	0/0:7,0:6:5.88:0,6,41	./.	0/0:4,0:4:11.90:0,12,82	./.	./.	1/1:12,0:12:11.95:62,12,0	0/0:9,0:9:8.23:0,8,60	0/0:3,0:2:2.97:0,3,21	0/0:5,0:5:8.89:0,9,62	0/0:5,0:5:13.94:0,14,88
chr10	58201041	.	T	TTAAA	1598.16	PASS	AB=1.000;AC=22;AF=0.579;AN=38;BaseQRankSum=-1.414;DP=196;FS=5.608;HRun=0;HaplotypeScore=37.1062;InbreedingCoeff=0.4764;MQ=61.89;MQ0=0;MQRankSum=0.489;QD=13.54;ReadPosRankSum=-1.468;VQSLOD=1.5180;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:12.02:0,12,162	./.	./.	./.	0/0:2,0:2:2.97:0,3,20	0/0:16,0:15:15.05:0,15,231	./.	1/1:27,0:26:2.22:7,2,0	1/1:4,3:7:9.03:211,9,0	1/1:2,2:4:6.02:141,6,0	./.	0/0:3,0:3:3:0,3,25	0/0:2,0:2:3.01:0,3,46	./.	1/1:7,2:9:9.03:192,9,0	0/1:9,0:10:21.94:45,0,22	0/1:20,0:20:23.77:24,0,170	0/0:0,0:7:15.02:0,15,140	1/1:6,0:5:3.01:70,3,0	./.	1/1:6,4:11:9.03:211,9,0	./.	0/0:5,0:5:12.04:0,12,185	./.	1/1:4,5:9:15.05:351,15,0	1/1:2,2:4:6.02:140,6,0	1/1:4,4:8:9.03:211,9,0	1/1:1,2:3:6.02:141,6,0
chr10	58201082	.	T	TAAATAAAC	576.95	PASS	AB=0.956;AC=12;AF=0.231;AN=52;BaseQRankSum=5.359;DP=200;FS=42.739;HRun=0;HaplotypeScore=62.1624;InbreedingCoeff=-0.3190;MQ=56.08;MQ0=3;MQRankSum=-2.154;QD=4.81;ReadPosRankSum=2.912;VQSLOD=-0.4372;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:5.82:0,6,384	0/0:1,0:1:3:0,3,25	./.	./.	0/0:4,0:4:11.99:0,12,110	0/1:17,0:16:33.59:34,0,611	0/0:3,0:3:8.99:0,9,74	0/0:27,0:25:71.84:0,72,607	0/1:7,0:7:26.18:26,0,34	0/1:4,0:4:17.08:24,0,17	0/0:2,0:2:5.92:0,6,42	0/0:3,0:3:8.99:0,9,74	0/0:5,0:5:15:0,15,184	0/0:1,0:1:3:0,3,25	0/1:4,1:5:13.30:146,0,13	0/1:3,3:7:99:119,0,103	0/1:22,0:22:99:242,0,546	0/0:7,0:7:15.05:0,15,294	0/1:9,0:7:2.50:2,0,139	0/0:1,0:1:2.96:0,3,19	0/1:8,0:8:12.47:29,0,12	0/0:3,0:3:5.99:0,6,50	0/0:6,0:6:18.03:0,18,385	0/0:2,0:2:2.92:0,3,17	0/1:11,0:11:37.79:38,0,119	0/1:12,0:11:18.36:18,0,162	0/1:8,0:8:12.99:30,0,13	0/1:10,0:9:0.70:1,0,142
chr10	58201648	.	TGA	T	2978.96	PASS	AB=1.000;AC=24;AF=0.429;AN=56;BaseQRankSum=-1.915;DP=443;FS=7.156;HRun=0;HaplotypeScore=72.7510;InbreedingCoeff=0.8304;MQ=78.24;MQ0=9;MQRankSum=-2.210;QD=16.02;ReadPosRankSum=1.925;VQSLOD=2.9452;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:14:14.16:211,14,0	0/0:8,0:8:19.80:0,20,155	0/0:21,0:16:40.96:0,41,389	0/0:26,0:19:36.93:0,37,338	1/1:8,0:8:17.97:146,18,0	0/0:18,0:18:47.27:0,47,376	0/0:11,0:11:21.38:0,21,171	0/0:25,0:25:68.48:0,68,603	1/1:15,0:14:32.98:315,33,0	1/1:18,0:18:50.16:439,50,0	1/1:13,0:13:25.25:243,25,0	0/0:19,0:18:40.15:0,40,316	0/0:14,0:14:40.95:0,41,373	0/0:15,0:15:39.02:0,39,443	1/1:13,0:13:8.63:215,9,0	0/0:18,0:18:44.96:0,45,440	0/0:13,0:13:25.36:0,25,179	0/0:10,0:10:26.80:0,27,195	1/1:12,0:12:32.56:270,33,0	1/1:14,0:14:38.94:339,39,0	1/1:21,0:21:41.75:343,42,0	0/0:26,0:26:49.02:0,49,381	0/0:18,0:18:31.37:0,31,283	0/0:15,0:14:20.83:0,21,160	0/1:13,0:13:14.59:161,0,15	1/1:21,0:21:20.58:367,21,0	1/1:0,17:17:5.75:95,6,0	0/1:5,0:5:10.86:54,0,11
chr10	58201649	.	GACACACACAC	G	581.42	PASS	AC=18;AF=0.346;AN=52;BaseQRankSum=0.566;DP=478;FS=11.890;HRun=0;HaplotypeScore=150.9849;InbreedingCoeff=0.6189;MQ=74.61;MQ0=11;MQRankSum=-2.964;QD=3.83;ReadPosRankSum=-0.885;VQSLOD=1.9509;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:21:6.36:0,6,136	1/1:6,0:8:3.01:70,3,0	./.	./.	0/0:17,0:17:0.88:0,1,2	1/1:18,0:18:14.60:95,15,0	1/1:9,2:11:6.02:164,6,0	1/1:25,0:25:0.12:1,0,0	0/0:15,0:14:12.04:0,12,337	0/0:20,0:19:9.03:0,9,370	0/0:15,0:15:9.01:0,9,240	1/1:15,4:18:2.93:88,3,0	0/0:16,0:16:18.02:0,18,608	0/0:15,0:15:18.06:0,18,774	0/0:17,0:16:21.07:0,21,935	0/0:17,0:17:27.07:0,27,829	1/1:10,0:13:3.01:70,3,0	0/0:10,0:9:9.03:0,9,139	0/0:16,0:16:3.01:0,3,78	0/0:16,0:16:18.06:0,18,509	0/0:24,0:24:12.04:0,12,373	1/1:23,3:26:3.01:88,3,0	1/1:13,4:17:3.01:88,3,0	1/1:14,1:14:3.01:71,3,0	0/0:13,0:13:15.05:0,15,702	0/0:23,0:23:30.09:0,30,1164	0/0:18,0:18:6.02:0,6,191	0/0:5,0:5:6.02:0,6,257
chr10	58204674	.	G	GACAA	9165.57	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-13.363;DP=788;FS=4.369;HRun=0;HaplotypeScore=115.7564;InbreedingCoeff=0.9994;MQ=71.60;MQ0=2;MQRankSum=-1.258;QD=45.60;ReadPosRankSum=1.783;VQSLOD=5.6055;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,117,1878	0/0:19,0:19:36.09:0,36,539	0/0:24,0:22:27.09:0,27,435	0/0:24,0:25:32.79:0,33,443	0/0:32,0:32:75.24:0,75,1198	1/1:3,15:19:27.09:659,27,0	1/1:7,13:20:33.11:805,33,0	0/0:30,0:30:48.12:0,48,655	0/0:33,0:33:69.20:0,69,1072	0/0:41,0:41:81.28:0,81,1324	0/0:18,0:18:39.13:0,39,639	1/1:6,17:25:54.15:1229,54,0	0/0:41,0:41:81.28:0,81,1324	0/0:22,0:22:45.15:0,45,726	0/0:27,0:28:75.25:0,75,1203	1/1:2,15:19:42.14:1025,42,0	0/0:29,0:29:66.21:0,66,1053	1/1:4,18:23:54.15:1254,54,0	0/0:21,0:21:28.34:0,28,445	0/0:32,0:32:78.25:0,78,1242	0/0:35,0:35:66.19:0,66,1048	1/1:11,27:38:81.04:1707,81,0	1/1:6,18:24:45.15:1097,45,0	1/1:6,26:33:57.20:1390,57,0	0/0:16,0:16:45.13:0,45,685	0/0:30,0:30:60.19:0,60,932	0/0:40,0:40:99:0,99,1596	0/0:17,0:17:45:0,45,601
chr10	58206060	.	G	GA	6703.93	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-13.454;DP=580;FS=2.833;HRun=8;HaplotypeScore=54.7078;InbreedingCoeff=0.9967;MQ=76.71;MQ0=0;MQRankSum=0.527;QD=28.41;ReadPosRankSum=-1.580;VQSLOD=4.8248;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:38,2:40:35.82:0,36,837	1/1:0,15:15:42.09:484,42,0	0/0:15,0:15:38.91:0,39,345	0/0:9,0:9:15:0,15,137	0/0:19,0:19:54.03:0,54,494	1/1:1,26:27:69.21:796,69,0	1/1:4,26:30:44.76:769,45,0	1/1:4,35:40:99:1168,105,0	0/0:18,0:18:48.02:0,48,439	0/0:19,0:19:48:0,48,436	0/0:20,0:20:54.03:0,54,494	1/1:2,9:11:21.06:242,21,0	0/0:15,0:15:36.02:0,36,329	0/0:20,0:20:57.03:0,57,522	0/0:25,0:25:72.02:0,72,653	1/1:2,20:22:35.69:653,36,0	1/1:0,17:17:48.14:554,48,0	1/1:2,11:13:27.08:312,27,0	0/0:21,0:21:60.03:0,60,549	0/0:17,0:17:45.02:0,45,412	0/0:20,0:20:60.03:0,60,549	1/1:5,9:14:27.08:307,27,0	1/1:3,20:23:57.17:658,57,0	1/1:0,24:24:66.20:761,66,0	0/0:16,0:16:45.02:0,45,412	0/0:24,0:23:63.03:0,63,576	0/0:21,0:21:57.02:0,57,517	0/0:25,0:25:56.98:0,57,513
chr10	58206226	.	TA	T	10882.21	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=2.485;DP=617;FS=6.039;HRun=10;HaplotypeScore=70.7720;InbreedingCoeff=0.9766;MQ=66.62;MQ0=0;MQRankSum=-1.234;QD=21.59;ReadPosRankSum=0.195;VQSLOD=5.7535;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:72.19:0,72,795	1/1:1,9:10:26.99:234,27,0	0/0:11,0:11:6.23:0,6,160	0/0:8,0:7:18.05:0,18,197	0/0:28,0:28:75.16:0,75,816	1/1:3,14:17:41.99:364,42,0	1/1:3,18:21:47.99:417,48,0	1/1:8,30:38:89.93:777,90,0	1/1:2,25:27:68.98:599,69,0	1/1:2,26:28:77.98:677,78,0	1/1:0,21:21:59.98:521,60,0	1/1:3,9:12:26.99:234,27,0	0/0:21,0:21:54.12:0,54,578	0/0:18,0:18:48.12:0,48,523	1/1:1,18:19:53.99:469,54,0	1/1:3,17:20:50.98:443,51,0	1/1:3,25:28:65.98:573,66,0	1/1:1,11:12:29.99:260,30,0	1/1:3,26:29:77.98:676,78,0	1/1:0,26:26:68.96:599,69,0	1/1:3,15:18:32.99:286,33,0	1/1:3,21:24:56.98:495,57,0	1/1:1,22:23:65.99:573,66,0	1/1:4,23:27:59.98:521,60,0	1/1:0,28:28:71.99:625,72,0	1/1:2,31:33:92.98:807,93,0	1/1:9,25:34:42.38:523,42,0	1/1:0,9:9:24:208,24,0
chr10	58207173	.	GGT	G	1959.64	PASS	AB=0.947;AC=23;AF=0.411;AN=56;BaseQRankSum=2.814;DP=765;FS=0.544;HRun=0;HaplotypeScore=131.5359;InbreedingCoeff=0.1961;MQ=64.34;MQ0=10;MQRankSum=3.392;QD=4.70;ReadPosRankSum=2.392;VQSLOD=3.0940;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:44:2.99:0,3,23	0/0:8,0:8:2.57:0,3,23	0/0:38,0:21:6.02:0,6,71	0/0:50,0:30:6:0,6,64	0/1:24,0:25:22.93:23,0,42	0/1:11,3:13:8.06:28,0,8	1/1:12,9:22:8.86:82,9,0	0/0:35,0:33:17.87:0,18,130	0/1:21,0:21:23.94:28,0,24	0/0:40,0:38:11.93:0,12,212	0/0:17,0:21:11.98:0,12,98	1/1:13,4:18:30.47:276,30,0	0/1:24,0:24:20.64:21,0,402	0/1:25,2:28:99:100,0,287	0/1:32,0:34:12.09:34,0,12	1/1:13,11:26:26.74:264,27,0	0/1:19,0:19:10.47:10,0,20	0/1:14,8:25:1.14:353,0,1	0/1:24,0:23:3.27:3,0,113	0/1:17,0:18:15.30:21,0,15	0/0:52,0:55:23.25:0,23,241	1/1:20,4:26:29.53:250,30,0	1/1:19,3:24:35.31:326,35,0	1/1:14,24:39:32.72:318,33,0	0/0:21,0:21:15.08:0,15,104	0/0:27,0:27:11.99:0,12,136	0/1:26,0:26:1.85:2,0,65	0/0:8,0:8:9.88:0,10,89
chr10	58207288	.	G	GTCTCTCTCTC	1729.61	PASS	AB=0.846;AC=16;AF=0.308;AN=52;BaseQRankSum=3.258;DP=751;FS=4.657;HRun=0;HaplotypeScore=182.5017;InbreedingCoeff=0.7903;MQ=54.41;MQ0=41;MQRankSum=-0.515;QD=5.84;ReadPosRankSum=-1.190;VQSLOD=2.5406;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:31,0:28:5.64:95,6,0	0/0:1,0:10:4.22:0,4,137	0/0:92,0:19:11.74:0,12,202	0/1:107,0:30:0.90:1,0,388	1/1:24,0:24:27.07:570,27,0	1/1:20,0:20:10.88:255,11,0	1/1:21,0:17:4.26:52,4,0	0/0:11,0:15:15.04:0,15,307	0/0:13,0:12:21.53:0,22,570	0/0:31,0:30:63.17:0,63,1613	0/0:14,0:14:24.07:0,24,655	./.	0/0:24,0:24:57.18:0,57,1550	0/0:24,0:24:51.07:0,51,1412	0/0:23,0:23:39.12:0,39,1024	1/1:20,0:20:6.91:219,7,0	0/0:12,0:14:26.34:0,26,749	1/1:22,0:21:10.79:295,11,0	0/0:21,0:19:36.03:0,36,865	0/0:26,0:26:37.54:0,38,1071	0/0:56,0:50:69.66:0,70,1766	0/1:10,0:18:0:0,0,0	./.	1/1:32,0:30:12.04:412,12,0	0/0:23,0:23:30.79:0,31,909	0/0:19,0:19:42.12:0,42,1043	0/0:15,0:14:24.29:0,24,705	0/0:4,0:4:9.03:0,9,207
chr10	58207306	.	CTCTGTGTG	C	968.17	PASS	AB=0.979;AC=11;AF=0.196;AN=56;BaseQRankSum=2.790;DP=721;FS=16.219;HRun=0;HaplotypeScore=158.7951;InbreedingCoeff=-0.1362;MQ=47.71;MQ0=41;MQRankSum=-1.169;QD=4.00;ReadPosRankSum=-0.165;VQSLOD=1.5054;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:24:8.94:0,9,74	0/0:11,0:11:10.44:0,10,210	0/0:62,0:8:11.10:0,11,112	0/0:64,0:15:20.57:0,21,144	0/0:23,0:23:26.54:0,27,212	0/0:20,0:20:14.74:0,15,221	0/0:30,0:26:38.57:0,39,685	1/1:20,0:15:0.60:68,1,0	0/1:20,0:19:99:153,0,156	0/1:27,5:31:99:347,0,445	0/0:15,0:15:23.94:0,24,193	0/0:22,0:21:9.01:0,9,169	0/0:28,0:27:37.19:0,37,1045	0/0:26,0:26:53.93:0,54,785	0/1:26,0:26:11.78:12,0,257	0/0:21,0:20:12.43:0,12,137	0/1:20,0:19:16.39:16,0,496	0/0:22,0:21:47.98:0,48,668	0/1:26,0:23:95.83:96,0,158	0/0:19,0:20:10.32:0,10,246	0/1:54,0:47:99:243,0,408	0/0:18,0:18:2.99:0,3,24	0/0:13,0:13:8.96:0,9,98	0/0:37,0:34:16.59:0,17,367	0/0:16,3:19:38.82:0,39,344	0/1:24,0:24:38.80:39,0,329	0/1:16,1:16:99:118,0,140	0/1:3,0:3:16.74:18,0,17
chr10	58207308	.	CTGTGTG	C	1062.15	PASS	AB=0.942;AC=21;AF=0.420;AN=50;BaseQRankSum=-0.154;DP=758;FS=13.669;HRun=0;HaplotypeScore=150.2889;InbreedingCoeff=0.4602;MQ=46.07;MQ0=42;MQRankSum=1.751;QD=3.23;ReadPosRankSum=0.619;VQSLOD=2.1648;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:26:0:0,0,0	0/0:11,0:11:9.50:0,10,189	./.	0/0:60,0:14:0:0,0,0	1/1:18,0:23:0.47:1,0,0	0/0:21,0:21:2.79:0,3,96	0/0:31,0:27:32.58:0,33,562	0/0:24,0:19:8.95:0,9,126	1/1:18,0:18:11.91:188,12,0	0/1:34,1:34:79.17:380,0,79	./.	0/0:25,0:24:12.01:0,12,194	0/0:28,0:27:1.49:0,1,519	0/0:27,0:27:12.04:0,12,316	1/1:21,10:31:2.77:15,3,0	0/0:22,0:22:6.02:0,6,132	0/0:22,0:21:35.63:0,36,533	0/0:25,0:24:23.93:0,24,426	0/1:26,0:23:22.17:98,0,22	1/1:16,4:20:0.45:1,0,0	1/1:66,0:59:15.03:264,15,0	1/1:17,0:17:2.96:19,3,0	0/0:14,0:14:11.97:0,12,128	0/0:42,0:39:10.55:0,11,405	1/1:17,1:18:2.57:25,3,0	1/1:26,0:25:0.77:56,1,0	1/1:13,6:18:8.76:161,9,0	./.
chr10	58207583	.	A	ATT	5227.90	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-4.590;DP=532;FS=3.281;HRun=7;HaplotypeScore=62.3822;InbreedingCoeff=0.9854;MQ=75.85;MQ0=0;MQRankSum=0.509;QD=27.09;ReadPosRankSum=3.314;VQSLOD=4.2205;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,0:26:57.39:202,57,0	0/0:6,0:6:18.05:0,18,208	0/0:17,0:17:23.87:0,24,240	0/0:6,0:6:7.55:0,8,61	1/1:5,0:32:60.79:230,61,0	1/1:2,18:20:42.11:661,42,0	1/1:2,9:11:21.07:345,21,0	0/0:30,0:30:69.18:0,69,795	0/0:17,0:17:45.13:0,45,523	0/0:26,0:26:72.21:0,72,838	0/0:26,0:26:72.12:0,72,806	1/1:1,9:10:21.07:345,21,0	0/0:13,0:13:39.12:0,39,454	0/0:17,0:17:42.10:0,42,477	0/0:20,0:20:54.16:0,54,629	1/1:1,10:11:27.09:443,27,0	0/0:22,0:22:60.16:0,60,686	1/1:1,21:22:51.17:837,51,0	0/0:27,0:27:60.11:0,60,690	0/0:27,0:27:72.20:0,72,837	0/0:13,0:13:36.09:0,36,408	1/1:4,19:23:51.17:836,51,0	1/1:2,17:19:45.15:739,45,0	1/1:1,17:18:36.12:591,36,0	0/0:11,0:11:30.07:0,30,339	0/0:19,0:19:51.13:0,51,583	0/0:27,0:27:81.21:0,81,921	0/0:15,0:15:42.10:0,42,477
chr10	58210014	.	GATATAT	G	7701.33	PASS	AB=0.559;AC=21;AF=0.420;AN=50;BaseQRankSum=-5.351;DP=374;FS=0.491;HRun=0;HaplotypeScore=98.3457;InbreedingCoeff=0.7888;MQ=67.00;MQ0=2;MQRankSum=-11.151;QD=42.79;ReadPosRankSum=2.261;VQSLOD=4.8768;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:21.07:0,21,694	0/0:0,0:5:15.05:0,15,196	0/0:10,0:5:2.72:0,3,21	0/0:23,0:14:15.26:0,15,300	0/0:9,0:10:12.04:0,12,327	0/0:1,0:11:17.16:0,17,233	./.	0/0:8,0:32:81.27:0,81,1156	1/1:2,8:10:21.07:451,21,0	1/1:6,16:22:42.14:916,42,0	1/1:3,26:30:81.23:1696,81,0	0/0:5,0:11:21.07:0,21,288	0/0:7,0:7:12.04:0,12,406	0/0:7,0:7:12.02:0,12,327	1/1:1,9:10:21.07:458,21,0	0/0:3,0:8:14.17:0,14,196	0/0:10,0:25:45.15:0,45,589	0/0:4,0:17:33.11:0,33,430	1/1:3,8:11:23.98:431,24,0	1/1:2,19:21:51.13:1066,51,0	1/1:0,1:1:3.01:65,3,0	./.	0/0:5,0:5:2.14:0,2,43	./.	1/1:1,15:16:30.10:654,30,0	0/1:4,15:19:53.39:875,0,53	1/1:4,21:26:45.15:958,45,0	1/1:3,11:14:6.02:131,6,0
chr10	58210545	.	C	CA	1733.66	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-9.641;DP=613;FS=11.854;HRun=5;HaplotypeScore=56.5983;InbreedingCoeff=0.9950;MQ=83.01;MQ0=0;MQRankSum=-2.630;QD=30.96;ReadPosRankSum=1.830;VQSLOD=3.5326;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,28:30:81.26:1066,81,0	0/0:7,0:7:21.05:0,21,226	0/0:21,0:21:51.11:0,51,533	0/0:14,0:14:36.08:0,36,376	1/1:4,22:26:60.20:789,60,0	0/0:33,0:33:84.19:0,84,895	0/0:22,0:22:57.12:0,57,603	0/0:25,0:25:60.15:0,60,645	0/0:23,0:23:63.16:0,63,677	0/0:33,0:33:99:0,99,1057	0/0:24,0:24:62.07:0,62,665	0/0:16,0:16:45.11:0,45,484	0/0:25,0:25:69.17:0,69,742	0/0:19,0:19:51.13:0,51,548	0/0:31,0:31:84.20:0,84,895	0/0:27,0:27:78.19:0,78,831	0/0:34,0:34:87.19:0,87,919	0/0:15,0:15:45.11:0,45,484	0/0:16,0:16:42.11:0,42,451	0/0:28,0:28:81.20:0,81,870	0/0:18,0:18:54.14:0,54,580	0/0:11,0:11:21.05:0,21,226	0/0:14,0:14:36.09:0,36,387	0/0:23,0:23:69.17:0,69,741	0/0:10,0:10:27.07:0,27,290	0/0:30,0:30:81.20:0,81,870	0/0:27,0:27:75.18:0,75,806	0/0:11,0:11:33.08:0,33,355
chr10	58210760	.	G	GA	824.18	PASS	AB=0.822;AC=5;AF=0.096;AN=52;BaseQRankSum=9.801;DP=879;FS=5.210;HRun=3;HaplotypeScore=89.6570;InbreedingCoeff=-0.1081;MQ=48.40;MQ0=72;MQRankSum=-7.983;QD=3.46;ReadPosRankSum=-0.323;VQSLOD=0.0363;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:49,8:49:99:161,0,773	0/0:8,0:8:21.05:0,21,242	./.	./.	0/0:24,2:24:12.30:0,12,570	0/0:37,0:35:87.25:0,87,1028	0/0:30,0:26:63.15:0,63,717	0/0:31,0:21:60.14:0,60,694	0/0:31,0:29:72.15:0,72,831	0/0:22,1:22:21.19:0,21,677	0/0:20,0:20:45.13:0,45,536	0/0:31,0:30:63.19:0,63,755	0/0:27,0:27:60.14:0,60,719	0/0:31,0:28:59.62:0,60,687	0/0:35,1:34:62.78:0,63,737	0/0:21,0:20:48.15:0,48,575	0/1:51,12:55:59.02:59,0,1024	0/1:43,9:43:99:200,0,739	0/0:35,0:25:49.12:0,49,698	0/0:25,0:23:51.11:0,51,594	0/1:36,25:48:99:488,0,571	0/0:19,0:19:42.13:0,42,502	0/0:25,0:21:42.10:0,42,480	0/0:50,0:37:78.24:0,78,932	0/0:21,0:18:39.10:0,39,456	0/0:36,1:34:54.30:0,54,1063	0/0:25,1:24:57.12:0,57,666	0/1:4,1:3:32.96:33,0,63
chr10	58213962	.	CCT	C	1609.10	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=5.392;DP=610;FS=1.282;HRun=0;HaplotypeScore=88.9051;InbreedingCoeff=0.9935;MQ=74.48;MQ0=0;MQRankSum=-2.560;QD=37.42;ReadPosRankSum=-2.111;VQSLOD=4.7535;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:75.25:0,75,1342	1/1:1,5:6:15.03:204,15,0	0/0:23,0:22:45.69:0,46,1056	0/0:28,0:28:68.61:0,69,1066	0/0:20,0:20:56.61:0,57,1011	0/0:18,0:18:48.16:0,48,862	0/0:29,0:29:81.24:0,81,1368	1/1:0,24:24:72.20:1025,72,0	0/0:24,0:24:69.21:0,69,1206	0/0:25,0:25:72.23:0,72,1231	0/0:11,0:11:30.57:0,31,544	0/0:31,0:31:69.19:0,69,1153	0/0:23,0:23:66.22:0,66,1208	0/0:30,0:30:90.20:0,90,1412	0/0:28,0:28:84.29:0,84,1521	0/0:16,0:16:42.02:0,42,744	1/1:0,13:13:36.09:520,36,0	0/0:20,0:20:50.84:0,51,821	0/0:20,0:20:60.16:0,60,953	0/0:13,0:13:39.13:0,39,714	0/0:36,0:36:99:0,108,1892	0/0:9,0:9:27.09:0,27,489	0/0:12,0:12:30.10:0,30,514	0/0:38,0:38:80.66:0,81,1426	0/0:23,0:23:69.24:0,69,1235	0/0:21,0:21:63.13:0,63,1098	0/0:22,0:21:63.18:0,63,1067	0/0:13,0:13:39.07:0,39,618
chr10	58214001	.	CTACTAT	C	1038.82	PASS	AB=1.000;AC=8;AF=0.143;AN=56;BaseQRankSum=4.830;DP=737;FS=2.103;HRun=0;HaplotypeScore=180.9898;InbreedingCoeff=0.6716;MQ=58.63;MQ0=5;MQRankSum=-3.894;QD=10.82;ReadPosRankSum=-2.826;VQSLOD=2.6217;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:36,0:36:30.94:31,0,184	1/1:0,4:4:5.97:88,6,0	0/0:44,0:29:68.58:0,69,1757	0/0:38,0:26:49.10:0,49,1312	0/0:19,0:19:28.47:0,28,267	0/0:28,0:28:48.11:0,48,807	0/0:30,0:30:45.13:0,45,767	1/1:8,10:18:48.09:789,48,0	0/0:25,0:25:72.24:0,72,1976	0/0:23,0:23:41.57:0,42,1490	0/0:13,0:13:36.12:0,36,912	0/0:31,0:31:17.63:0,18,782	0/0:28,0:28:77.94:0,78,2305	0/0:36,0:36:99:0,108,2943	0/0:38,0:38:99:0,105,2887	0/0:16,0:16:32.45:0,32,638	1/1:12,4:16:17.75:264,18,0	0/0:19,0:19:41.83:0,42,869	0/0:24,0:24:66.17:0,66,1463	0/0:25,0:25:64.99:0,65,1551	0/0:38,0:38:98.10:0,98,2372	0/1:22,0:22:13.15:13,0,478	0/0:22,0:22:24.50:0,25,308	0/0:55,0:55:99:0,105,2335	0/0:17,0:17:45.05:0,45,833	0/0:33,0:33:99:0,99,2364	0/0:24,0:23:69.02:0,69,1782	0/0:15,0:15:45.09:0,45,995
chr10	58214017	.	T	TACG	4711.05	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=-0.439;DP=773;FS=11.856;HRun=0;HaplotypeScore=148.3362;InbreedingCoeff=0.8375;MQ=59.70;MQ0=7;MQRankSum=2.762;QD=16.24;ReadPosRankSum=5.588;VQSLOD=3.6246;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,1:35:16.03:113,16,0	0/0:8,0:8:11.77:0,12,92	0/0:47,0:36:88.88:0,89,1263	0/0:38,0:25:47.19:0,47,856	0/0:5,1:19:13.26:0,13,48	1/1:2,23:25:30.53:654,31,0	1/1:6,28:35:13.87:463,14,0	0/1:23,0:23:13.69:14,0,241	0/0:24,0:24:66.20:0,66,1061	0/0:23,0:23:69.13:0,69,1023	0/0:16,0:16:42.13:0,42,677	1/1:3,25:29:11.56:507,12,0	0/0:30,0:30:90.19:0,90,1286	0/0:37,0:37:99:0,108,1676	0/0:46,0:46:99:0,138,2052	1/1:4,13:18:16.22:360,16,0	0/0:19,0:19:2.57:0,3,122	1/1:2,18:20:30.41:607,30,0	0/0:26,0:25:65.21:0,65,913	0/0:27,0:27:72.21:0,72,1151	0/0:33,0:32:96.22:0,96,1456	1/1:4,20:26:3.07:417,3,0	1/1:11,15:26:8.56:181,9,0	1/1:8,44:52:67.73:1393,68,0	0/0:13,0:13:33.03:0,33,491	0/0:38,0:38:99:0,111,1664	0/0:26,0:26:75.06:0,75,1071	0/0:12,0:12:36.10:0,36,564
chr10	58214128	.	T	TG	2787.97	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.802;DP=701;FS=0.000;HRun=3;HaplotypeScore=75.7334;InbreedingCoeff=1.0000;MQ=85.44;MQ0=0;MQRankSum=-1.142;QD=32.80;ReadPosRankSum=-1.167;VQSLOD=3.4397;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:96.25:0,96,1133	1/1:1,19:20:57.19:798,57,0	0/0:28,0:28:78.10:0,78,869	0/0:20,0:20:44.05:0,44,531	0/0:29,0:29:78.24:0,78,934	0/0:28,0:28:84.26:0,84,1008	0/0:23,0:23:63.19:0,63,756	1/1:3,31:33:87.25:1167,87,0	0/0:21,0:21:54.15:0,54,635	0/0:23,0:23:69.21:0,69,828	0/0:30,0:30:84.26:0,84,1006	0/0:18,0:18:51.14:0,51,601	0/0:26,0:26:66.19:0,66,779	0/0:24,0:24:72.22:0,72,864	0/0:30,0:30:87.27:0,87,1044	0/0:21,0:21:60.17:0,60,708	1/1:4,27:31:69.23:966,69,0	0/0:20,0:20:54.17:0,54,648	0/0:21,0:21:60.17:0,60,710	0/0:32,0:32:93.28:0,93,1115	0/0:21,0:21:60.18:0,60,720	0/0:19,0:19:51.11:0,51,596	0/0:27,0:27:78.20:0,78,900	0/0:30,0:30:81.21:0,81,939	0/0:29,0:29:84.24:0,84,989	0/0:19,0:19:51.15:0,51,603	0/0:26,0:26:75.22:0,75,890	0/0:17,0:17:48.15:0,48,576
chr10	58214880	.	AC	A	25430.19	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=6.694;DP=741;FS=7.132;HRun=1;HaplotypeScore=70.8061;InbreedingCoeff=0.9987;MQ=82.40;MQ0=0;MQRankSum=-9.104;QD=39.98;ReadPosRankSum=4.072;VQSLOD=5.4335;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,45:45:99:1845,132,0	1/1:0,8:8:21.07:292,21,0	0/0:28,0:27:81.24:0,81,1220	0/0:29,0:29:84.28:0,84,1301	1/1:0,24:24:66.22:922,66,0	1/1:0,20:20:57.19:797,57,0	1/1:0,36:36:99:1511,108,0	1/1:0,35:34:99:1403,102,0	1/1:0,40:40:99:1553,111,0	1/1:0,24:24:72.24:1006,72,0	1/1:0,14:14:42.14:587,42,0	1/1:0,19:19:57.19:797,57,0	0/0:23,0:23:69.23:0,69,1088	0/0:25,0:25:75.26:0,75,1190	1/1:0,37:37:99:1469,105,0	1/1:0,29:29:81.27:1132,81,0	1/1:1,27:28:78.26:1091,78,0	1/1:0,23:23:69.23:964,69,0	1/1:0,20:20:60.17:804,60,0	1/1:0,32:32:87.29:1216,87,0	1/1:0,33:33:99:1384,99,0	1/1:0,24:23:66.22:920,66,0	1/1:0,17:17:48.16:671,48,0	1/1:1,31:32:93.31:1296,93,0	1/1:0,25:25:66.22:923,66,0	1/1:0,25:25:75.25:1045,75,0	1/1:0,36:36:99:1383,99,0	1/1:0,10:10:30.10:420,30,0
chr10	58215345	.	T	TA	1547.49	PASS	AB=0.926;AC=35;AF=0.761;AN=46;BaseQRankSum=3.407;DP=235;FS=0.000;HRun=12;HaplotypeScore=75.7093;InbreedingCoeff=0.4132;MQ=51.89;MQ0=17;MQRankSum=-2.564;QD=7.74;ReadPosRankSum=-1.829;VQSLOD=2.1944;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,0:2:5.93:41,6,0	./.	0/0:11,0:4:3.27:0,3,26	0/1:14,0:6:3.57:4,0,4	./.	1/1:10,0:10:6.30:39,6,0	1/1:5,0:7:10.89:58,11,0	./.	1/1:4,3:8:14.19:98,14,0	1/1:13,3:15:10.01:168,10,0	0/1:13,1:14:8.60:48,0,9	1/1:6,1:6:5.04:32,5,0	0/0:4,0:3:7.78:0,8,49	0/0:6,0:6:17.89:0,18,131	1/1:9,8:15:15.65:171,16,0	1/1:4,1:6:5.14:40,5,0	./.	1/1:5,1:7:12.91:81,13,0	1/1:7,3:9:5.83:82,6,0	1/1:3,3:6:11.82:91,12,0	./.	1/1:10,0:12:13.62:72,14,0	0/0:5,0:5:1.25:0,1,3	0/1:9,0:11:11.06:37,0,11	1/1:9,6:15:26.11:197,26,0	1/1:12,2:14:4.20:136,4,0	1/1:5,7:11:24.48:223,24,0	1/1:4,1:3:7.83:62,8,0
chr10	58215352	.	A	AC	138.95	PASS	AB=0.964;AC=13;AF=0.271;AN=48;BaseQRankSum=2.811;DP=263;FS=16.306;HRun=0;HaplotypeScore=92.6508;InbreedingCoeff=-0.0936;MQ=50.54;MQ0=19;MQRankSum=-0.589;QD=1.09;ReadPosRankSum=3.904;VQSLOD=0.5451;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:2,2:2:6.02:79,6,0	./.	0/1:13,0:4:18.05:18,0,37	0/0:17,0:7:7.86:0,8,68	./.	0/0:12,0:10:17.18:0,17,104	0/0:9,0:8:12:0,12,63	./.	0/1:7,1:8:32.24:32,0,51	0/0:19,0:17:14.75:0,15,145	0/0:13,0:13:7.73:0,8,89	0/0:6,0:5:1.62:0,2,24	0/0:4,0:3:9.02:0,9,112	0/0:6,0:6:18.06:0,18,250	0/1:18,0:16:11.88:12,0,65	0/0:9,0:9:13.70:0,14,112	./.	0/0:10,0:7:10.47:0,10,77	0/1:15,0:11:37.40:41,0,37	0/1:8,0:8:6.20:9,0,6	1/1:4,0:2:1.55:4,2,0	0/1:12,1:13:9.39:9,0,118	0/0:7,0:5:11.87:0,12,84	0/1:10,2:12:32.16:32,0,121	0/1:19,0:19:2.65:3,0,87	0/0:15,0:15:3.64:0,4,106	0/1:13,0:12:30.01:30,0,36	0/0:5,0:3:0.22:0,0,34
chr10	58215354	.	AAAACAAAC	A	1753.80	PASS	AB=0.983;AC=15;AF=0.313;AN=48;BaseQRankSum=-3.986;DP=266;FS=22.032;HRun=0;HaplotypeScore=110.3819;InbreedingCoeff=-0.2251;MQ=50.50;MQ0=19;MQRankSum=-2.691;QD=10.44;ReadPosRankSum=-1.705;VQSLOD=0.6863;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:2:5.95:0,6,79	./.	0/1:13,0:4:10.92:11,0,60	0/0:17,0:7:3.02:0,3,115	./.	0/0:13,0:11:7.79:0,8,215	0/1:9,0:8:27.77:28,0,244	./.	0/1:9,0:9:99:110,0,132	0/1:16,3:17:29.31:397,0,29	1/1:5,7:12:3.30:91,3,0	0/0:6,0:5:5.60:0,6,128	0/0:4,0:3:9.03:0,9,325	0/0:6,0:6:18.06:0,18,521	0/1:17,1:16:41.30:173,0,41	0/0:10,0:10:1.25:0,1,347	./.	0/0:10,0:7:5.35:0,5,375	0/1:14,0:10:35.53:198,0,36	0/1:8,0:8:23.28:63,0,23	0/0:4,0:2:5.81:0,6,33	0/0:13,0:13:8.69:0,9,501	0/0:7,0:5:5.48:0,5,125	0/1:12,0:12:9.24:9,0,304	0/1:20,0:20:49.82:258,0,50	1/1:15,0:15:32.36:450,32,0	0/1:13,0:12:79.11:79,0,257	0/1:6,0:4:30.92:31,0,32
chr10	58215355	.	AAAC	A	1540.75	PASS	AB=0.960;AC=23;AF=0.479;AN=48;BaseQRankSum=-2.209;DP=262;FS=4.751;HRun=0;HaplotypeScore=90.9783;InbreedingCoeff=0.0505;MQ=50.72;MQ0=20;MQRankSum=-3.572;QD=8.02;ReadPosRankSum=-3.124;VQSLOD=1.8944;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:2:6.01:0,6,64	./.	0/0:13,0:4:2.46:0,2,64	0/0:17,0:7:7.73:0,8,59	./.	0/1:12,1:11:8.57:9,0,33	0/1:8,1:8:30.21:45,0,30	./.	0/1:8,0:8:30.57:52,0,31	0/1:16,3:17:24.69:215,0,25	1/1:11,0:11:9.42:67,9,0	0/1:6,0:5:2.83:40,0,3	0/0:4,0:3:9.03:0,9,162	0/0:6,0:6:18.06:0,18,325	0/1:16,1:15:19.31:129,0,19	0/1:10,0:10:1.54:2,0,40	./.	0/0:10,0:7:3.99:0,4,50	1/1:13,1:10:22.22:181,22,0	1/1:7,1:8:15.39:134,15,0	0/1:4,0:2:0.17:0,0,0	0/1:13,0:13:45.71:46,0,73	0/1:7,0:5:14.03:20,0,14	0/0:12,0:12:0.48:0,0,78	1/1:17,4:20:26.86:292,27,0	1/1:9,5:14:26.50:315,26,0	0/1:11,1:11:21.85:109,0,22	1/1:6,0:4:4.39:40,4,0
chr10	58215356	.	AAC	A	1215.83	PASS	AB=0.965;AC=32;AF=0.667;AN=48;BaseQRankSum=-1.482;DP=261;FS=5.062;HRun=0;HaplotypeScore=88.7485;InbreedingCoeff=0.1221;MQ=50.76;MQ0=20;MQRankSum=-1.462;QD=5.29;ReadPosRankSum=-2.882;VQSLOD=1.7900;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:2:6.02:0,6,69	./.	0/0:13,0:4:6.60:0,7,74	0/1:18,0:7:4.04:4,0,33	./.	1/1:12,1:11:6.39:32,6,0	1/1:8,0:7:10.96:53,11,0	./.	0/1:8,0:8:22.16:67,0,22	0/1:19,0:17:9.69:141,0,10	1/1:10,1:11:3.97:65,4,0	1/1:5,1:5:7.58:34,8,0	0/0:4,0:3:9.02:0,9,124	0/0:6,0:6:18.06:0,18,270	0/1:17,0:15:30.07:43,0,30	0/1:10,0:10:5.78:61,0,6	./.	1/1:9,1:7:10.92:67,11,0	1/1:14,0:10:21.86:109,22,0	1/1:8,0:8:14.17:68,14,0	1/1:4,0:2:2.90:16,3,0	0/1:9,3:12:26.24:61,0,26	1/1:6,1:5:3.15:61,3,0	0/1:11,1:12:29.94:30,0,40	1/1:20,1:20:24.59:240,25,0	1/1:14,0:14:20.13:171,20,0	0/1:12,0:11:29.62:30,0,41	1/1:6,0:4:3.06:18,3,0
chr10	58215357	.	AC	A	1269.49	PASS	AB=1.000;AC=38;AF=0.792;AN=48;BaseQRankSum=0.587;DP=252;FS=6.010;HRun=1;HaplotypeScore=84.2740;InbreedingCoeff=0.2960;MQ=51.36;MQ0=20;MQRankSum=-5.009;QD=5.45;ReadPosRankSum=-1.256;VQSLOD=-0.0722;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:2:5.97:0,6,45	./.	0/1:13,0:4:15.11:15,0,45	0/1:18,0:7:0.73:1,0,25	./.	1/1:8,3:9:10.97:58,11,0	1/1:8,0:7:12.66:58,13,0	./.	1/1:8,0:8:0.57:90,1,0	1/1:18,0:16:14.47:137,14,0	1/1:11,0:11:1.48:32,1,0	1/1:5,0:5:6.41:28,6,0	0/0:4,0:3:8.86:0,9,87	0/0:6,0:6:17.99:0,18,201	1/1:17,0:15:0.88:44,1,0	1/1:7,2:9:12.34:84,12,0	./.	1/1:10,0:7:16.66:82,17,0	1/1:14,0:10:18.11:100,18,0	1/1:7,0:7:11.90:59,12,0	1/1:3,0:2:2.94:18,3,0	1/1:12,0:12:0.15:76,0,0	1/1:6,1:5:10.17:80,10,0	0/1:10,0:10:20.05:30,0,20	1/1:21,0:20:32.19:214,32,0	1/1:13,0:13:15.94:147,16,0	0/1:11,0:10:6.51:37,0,7	1/1:6,0:4:4.40:21,4,0
chr10	58215358	.	C	CA	2013.76	PASS	AB=0.887;AC=36;AF=0.750;AN=48;BaseQRankSum=3.817;DP=260;FS=1.175;HRun=12;HaplotypeScore=86.4224;InbreedingCoeff=0.4541;MQ=50.85;MQ0=19;MQRankSum=-5.191;QD=8.83;ReadPosRankSum=-0.129;VQSLOD=2.8788;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:2:5.78:0,6,31	./.	0/0:13,0:4:6.34:0,6,51	0/1:18,0:8:27.28:27,0,37	./.	1/1:7,4:9:8.15:115,8,0	1/1:4,5:8:17.89:198,18,0	./.	0/1:8,0:9:2.62:32,0,3	1/1:18,0:16:20.10:109,20,0	1/1:10,0:11:8.37:53,8,0	1/1:3,4:6:11.99:123,12,0	0/0:4,0:3:8.94:0,9,89	0/0:6,0:6:18.04:0,18,197	1/1:17,0:15:15.11:96,15,0	1/1:2,7:9:13.48:160,13,0	./.	1/1:6,4:7:15.05:187,15,0	1/1:12,2:10:11.20:131,11,0	1/1:6,0:7:15.13:96,15,0	1/1:2,1:2:5.69:44,6,0	1/1:6,7:13:10.70:255,11,0	1/1:7,2:7:9.78:95,10,0	0/1:5,6:11:21.04:104,0,21	1/1:22,0:21:24.01:141,24,0	0/1:13,0:13:4.12:13,0,4	1/1:11,0:10:26.72:149,27,0	1/1:5,0:4:9.92:39,10,0
chr10	58215369	.	A	AC	443.79	PASS	AB=0.904;AC=11;AF=0.229;AN=48;BaseQRankSum=7.345;DP=286;FS=3.049;HRun=0;HaplotypeScore=106.1299;InbreedingCoeff=0.0227;MQ=55.81;MQ0=18;MQRankSum=-1.955;QD=3.36;ReadPosRankSum=4.883;VQSLOD=3.2702;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:2:6.02:0,6,82	./.	0/0:20,0:5:10.88:0,11,66	0/1:21,0:10:4.43:4,0,65	./.	0/0:10,0:8:12.01:0,12,139	0/0:8,0:7:15.05:0,15,199	./.	0/1:9,2:11:32.23:32,0,81	0/1:15,4:17:74.86:97,0,75	0/1:10,1:11:16:54,0,16	0/0:9,0:8:14.99:0,15,169	0/0:5,0:4:12.01:0,12,133	0/0:5,0:5:15.02:0,15,164	1/1:11,6:15:2.19:164,2,0	0/0:8,0:8:15.04:0,15,186	./.	0/0:10,0:9:20.96:0,21,225	0/0:17,0:13:19.63:0,20,165	0/1:10,0:10:6.58:7,0,30	0/0:2,0:2:5.42:0,5,26	0/0:13,0:13:30.10:0,30,400	0/0:12,0:10:23.77:0,24,256	0/0:13,0:13:26.97:0,27,302	0/1:15,8:22:28.72:180,0,29	0/0:14,0:14:25.23:0,25,120	0/1:14,0:13:23.66:24,0,46	1/1:6,0:5:2.09:13,2,0
chr10	58215374	.	A	AC	750.67	PASS	AB=0.948;AC=20;AF=0.417;AN=48;BaseQRankSum=2.999;DP=276;FS=4.974;HRun=0;HaplotypeScore=103.8340;InbreedingCoeff=0.0365;MQ=52.65;MQ0=15;MQRankSum=-2.471;QD=3.83;ReadPosRankSum=-1.959;VQSLOD=2.5879;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:2:6.02:0,6,83	./.	0/0:16,0:3:5.03:0,5,30	0/0:17,0:8:7.73:0,8,89	./.	0/1:11,0:9:13.13:13,0,41	0/0:8,0:8:13.94:0,14,67	./.	0/1:10,1:11:17.92:18,0,76	0/1:16,3:17:53.23:53,0,69	1/1:11,1:12:0.85:26,1,0	0/1:10,0:9:30.54:31,0,37	0/0:5,0:4:12.01:0,12,133	0/0:4,0:4:12.03:0,12,139	1/1:9,5:14:6.18:67,6,0	0/0:8,0:8:13.64:0,14,76	./.	0/1:12,0:11:28.74:37,0,29	0/1:17,0:13:53.36:67,0,53	1/1:11,0:11:18.11:136,18,0	0/0:2,0:2:2.30:0,2,14	0/0:12,0:12:26.57:0,27,139	0/1:12,0:10:8:8,0,70	0/1:13,0:13:17.85:18,0,70	0/1:13,8:22:8.44:78,0,8	1/1:12,0:12:12.48:118,12,0	1/1:13,0:12:12.56:149,13,0	0/1:6,0:5:4.97:88,0,5
chr10	58215379	.	CA	C	1226.52	PASS	AB=0.852;AC=31;AF=0.646;AN=48;BaseQRankSum=2.508;DP=260;FS=0.000;HRun=11;HaplotypeScore=97.0210;InbreedingCoeff=0.1154;MQ=49.17;MQ0=13;MQRankSum=0.624;QD=5.26;ReadPosRankSum=-0.362;VQSLOD=1.8402;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:2:2.97:0,3,20	./.	0/0:11,1:2:4.56:0,5,31	0/1:14,1:7:5.49:5,0,81	./.	1/1:7,5:10:1.43:32,1,0	1/1:7,1:8:1.75:9,2,0	./.	0/1:7,5:12:41.37:41,0,48	0/1:9,10:17:10.54:165,0,11	1/1:7,2:9:5.39:63,5,0	0/1:10,1:10:0.90:21,0,1	0/0:4,0:3:9.03:0,9,121	0/0:3,0:3:2.48:0,2,39	1/1:6,8:14:4.76:115,5,0	0/1:8,0:8:0.54:5,0,1	./.	1/1:12,0:11:6.30:35,6,0	0/1:9,7:12:17.12:127,0,17	1/1:1,10:11:23.58:145,24,0	0/1:1,0:1:0:0,0,0	0/1:11,1:12:6.21:6,0,21	0/1:8,2:9:4.13:9,0,4	1/1:13,0:13:0.72:13,1,0	1/1:8,13:20:22.92:177,23,0	1/1:3,7:10:23.83:187,24,0	1/1:3,10:13:5.89:136,6,0	1/1:1,4:5:4.14:67,4,0
chr10	58215388	.	A	AAC	4369.13	PASS	AC=20;AF=0.435;AN=46;BaseQRankSum=0.897;DP=280;FS=19.711;HRun=0;HaplotypeScore=91.7175;InbreedingCoeff=0.9033;MQ=51.79;MQ0=9;MQRankSum=-2.374;QD=30.99;ReadPosRankSum=0.099;VQSLOD=5.0142;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:3:4.78:0,5,25	./.	0/0:10,0:2:5.91:0,6,61	0/0:12,0:7:16.99:0,17,123	./.	0/0:13,0:11:23.06:0,23,233	0/0:9,0:9:19.11:0,19,158	./.	1/1:7,5:13:18.95:370,19,0	1/1:7,14:19:40.18:680,40,0	1/1:6,2:8:11.99:155,12,0	0/0:11,0:10:25.24:0,25,268	0/0:3,0:3:9.03:0,9,138	0/0:3,0:3:3.01:0,3,46	1/1:5,10:16:29.84:442,30,0	0/0:10,0:10:18.56:0,19,153	./.	0/0:12,0:11:29.43:0,29,285	1/1:4,16:19:27.97:773,28,0	1/1:4,7:11:21.52:256,22,0	./.	0/0:14,0:14:38.07:0,38,388	0/0:14,0:14:32.84:0,33,298	0/0:14,0:14:23.97:0,24,284	1/1:11,11:22:56.44:632,56,0	1/1:1,7:8:23.85:322,24,0	1/1:3,11:15:29.01:534,29,0	1/1:2,4:6:12.04:205,12,0
chr10	58215802	.	G	GC	26778.64	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-11.560;DP=744;FS=1.691;HRun=0;HaplotypeScore=69.8372;InbreedingCoeff=0.9956;MQ=94.68;MQ0=0;MQRankSum=-10.320;QD=43.19;ReadPosRankSum=4.878;VQSLOD=5.2830;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,44:45:99:2013,126,0	1/1:1,14:15:39.13:623,39,0	0/0:38,0:38:99:0,103,1394	0/0:35,0:35:84.27:0,84,1172	1/1:1,23:24:66.23:1054,66,0	1/1:0,23:23:63.15:977,63,0	1/1:0,21:21:63.21:1007,63,0	1/1:1,29:30:87.25:1334,87,0	1/1:0,22:22:60.20:959,60,0	1/1:0,20:20:60.20:959,60,0	1/1:2,23:25:60.20:957,60,0	1/1:1,35:36:93.32:1486,93,0	0/0:19,0:19:48.09:0,48,646	0/0:32,0:32:93.28:0,93,1265	1/1:1,34:35:93.32:1486,93,0	1/1:0,23:23:60.20:959,60,0	1/1:1,32:33:90.31:1438,90,0	1/1:0,17:17:48.16:767,48,0	1/1:1,27:28:81.21:1238,81,0	1/1:0,27:27:75.26:1198,75,0	1/1:1,41:42:99:1581,99,0	1/1:0,37:37:99:1627,102,0	1/1:0,21:21:60.01:926,60,0	1/1:1,15:16:45.15:719,45,0	1/1:0,20:20:54.18:863,54,0	1/1:1,25:26:75.23:1171,75,0	1/1:2,27:29:75.26:1198,75,0	1/1:0,5:5:15.05:240,15,0
chr10	58216998	.	GGGA	G	1931.34	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=10.117;DP=543;FS=1.867;HRun=0;HaplotypeScore=108.8866;InbreedingCoeff=0.9299;MQ=76.89;MQ0=1;MQRankSum=-10.036;QD=29.71;ReadPosRankSum=-0.092;VQSLOD=3.9147;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,40:44:89.92:1363,90,0	0/0:3,0:3:9:0,9,89	0/0:18,0:18:42.50:0,43,699	0/0:23,0:22:45.99:0,46,873	1/1:2,19:21:45.04:690,45,0	0/0:24,0:24:72.23:0,72,1405	0/0:19,0:19:57.18:0,57,1137	0/0:9,0:9:15.01:0,15,191	0/0:22,0:22:57.18:0,57,763	0/0:16,0:16:27.99:0,28,500	0/0:15,0:15:42.06:0,42,524	0/0:16,0:16:48.12:0,48,869	0/0:17,0:17:51.14:0,51,994	0/0:15,0:15:36.49:0,36,626	0/0:12,0:12:35.85:0,36,476	0/0:21,0:21:63.17:0,63,1188	0/0:31,0:31:75.20:0,75,973	0/0:25,0:25:75.26:0,75,1576	0/0:7,0:7:21.06:0,21,257	0/0:14,0:14:10.69:0,11,340	0/0:21,0:21:54.16:0,54,752	0/0:21,0:21:63.22:0,63,1313	0/0:29,0:29:84.10:0,84,1620	0/0:29,0:29:84.23:0,84,1648	0/0:11,0:11:18.04:0,18,227	0/0:29,0:29:86.92:0,87,1092	0/0:26,0:26:66.16:0,66,855	0/0:5,0:5:15.03:0,15,181
chr10	58217001	.	A	AG	5524.56	PASS	AB=0.770;AC=28;AF=0.500;AN=56;BaseQRankSum=-9.434;DP=552;FS=38.419;HRun=8;HaplotypeScore=81.1567;InbreedingCoeff=0.8365;MQ=77.18;MQ0=1;MQRankSum=1.395;QD=20.46;ReadPosRankSum=-2.340;VQSLOD=2.2113;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:44,0:44:36.30:36,0,66	1/1:3,1:4:3.01:35,3,0	0/0:19,0:19:18.19:0,18,218	0/0:22,0:21:18.87:0,19,261	0/0:22,0:22:10.86:0,11,78	0/0:24,0:24:54.01:0,54,494	0/0:21,0:21:57.01:0,57,516	1/1:0,9:9:15.04:172,15,0	1/1:1,20:21:57.17:658,57,0	1/1:6,12:18:33.08:369,33,0	1/1:0,15:15:36.11:414,36,0	0/0:15,0:15:39.02:0,39,356	0/0:17,0:17:45.02:0,45,412	0/0:12,0:12:24.89:0,25,221	1/1:2,10:12:30.09:346,30,0	0/0:23,0:23:32.60:0,33,470	1/1:5,29:34:66.20:762,66,0	0/0:25,0:25:72.03:0,72,659	1/1:4,5:9:15.04:173,15,0	1/1:1,13:14:36.05:387,36,0	0/1:3,17:20:3.60:468,0,4	0/0:22,0:22:63.03:0,63,576	0/0:31,0:31:72.01:0,72,657	0/0:29,0:29:77.98:0,78,700	1/1:1,9:10:15.04:173,15,0	1/1:5,25:30:75.11:812,75,0	1/1:6,19:25:51.14:581,51,0	1/1:1,4:5:12.04:138,12,0
chr10	58217503	.	TATACATACATACATAC	T	19275.74	PASS	AB=0.654;AC=35;AF=0.625;AN=56;BaseQRankSum=9.077;DP=819;FS=0.000;HRun=0;HaplotypeScore=345.3011;InbreedingCoeff=0.3335;MQ=55.24;MQ0=6;MQRankSum=-8.284;QD=30.99;ReadPosRankSum=1.008;VQSLOD=2.8858;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:24,9:33:45.68:976,0,46	0/1:5,0:11:22.13:22,0,25	0/0:19,0:11:6:0,6,67	0/0:22,0:13:3.01:0,3,160	1/1:20,14:34:47.86:1134,48,0	1/1:9,0:30:9.40:244,9,0	0/1:13,0:23:29.57:30,0,137	0/0:26,0:38:22.39:0,22,529	1/1:10,25:36:36.12:1449,36,0	1/1:5,29:34:70.28:2505,70,0	1/1:4,27:31:54.19:1743,54,0	0/1:11,0:31:99:190,0,151	0/0:45,0:45:99:0,108,6896	0/0:38,0:38:78.27:0,78,4931	1/1:6,28:34:42.14:1683,42,0	1/1:12,0:36:16.85:325,17,0	0/1:3,0:23:8.78:54,0,9	0/0:6,0:10:2.88:0,3,15	1/1:10,8:17:24.04:749,24,0	1/1:15,27:42:48.16:1523,48,0	1/1:16,11:25:5.62:188,6,0	0/1:15,0:29:99:143,0,227	0/1:11,0:27:54.11:178,0,54	0/0:11,0:24:0.94:0,1,2	1/1:9,31:40:42.14:1625,42,0	1/1:14,21:35:63.21:2225,63,0	1/1:16,24:40:42.14:1836,42,0	1/1:3,5:8:12.04:454,12,0
chr10	58217546	.	CA	C	1415.61	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.045;DP=864;FS=4.531;HRun=3;HaplotypeScore=254.2231;InbreedingCoeff=0.9834;MQ=52.69;MQ0=3;MQRankSum=-2.976;QD=22.12;ReadPosRankSum=1.806;VQSLOD=2.4495;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,30:31:44.09:658,44,0	0/0:12,0:12:27.08:0,27,368	0/0:39,0:26:74.27:0,74,1070	0/0:29,0:20:60.18:0,60,809	1/1:0,33:33:72.14:880,72,0	0/0:34,0:34:61.08:0,61,779	0/0:23,0:23:32.90:0,33,428	0/0:50,0:49:99:0,141,1925	0/0:32,0:32:51.08:0,51,636	0/0:45,0:45:96.18:0,96,1304	0/0:34,0:34:55.65:0,56,660	0/0:29,0:29:45.13:0,45,574	0/0:40,0:40:99:0,120,1708	0/0:34,0:34:99:0,99,1385	0/0:37,0:37:69.19:0,69,884	0/0:36,0:36:78.23:0,78,1012	0/0:30,0:30:39.09:0,39,511	0/0:8,0:8:12.04:0,12,172	0/0:21,0:20:52.97:0,53,684	0/0:42,0:42:90.26:0,90,1185	0/0:25,0:25:36.83:0,37,397	0/0:22,0:22:51.54:0,52,643	0/0:23,0:23:40.01:0,40,479	0/0:27,0:27:32.90:0,33,423	0/0:42,0:42:78.24:0,78,1034	0/0:33,0:33:88.26:0,88,1165	0/0:40,0:40:83.57:0,84,1042	0/0:13,0:13:36.12:0,36,500
chr10	58219213	.	A	AC	22421.29	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-11.595;DP=718;FS=0.872;HRun=3;HaplotypeScore=67.1325;InbreedingCoeff=0.9988;MQ=85.04;MQ0=0;MQRankSum=-7.700;QD=36.11;ReadPosRankSum=5.001;VQSLOD=5.2293;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,39:42:99:1467,105,0	1/1:1,12:13:36.12:504,36,0	0/0:28,0:28:72.19:0,72,843	0/0:21,0:21:54.15:0,54,636	1/1:0,26:26:72.17:965,72,0	1/1:1,26:27:63.21:882,63,0	1/1:4,23:27:66.80:962,67,0	1/1:5,29:34:87.29:1215,87,0	1/1:2,26:28:78.26:1092,78,0	1/1:0,33:33:96.31:1322,96,0	1/1:1,24:25:60.20:839,60,0	1/1:1,22:23:66.22:919,66,0	0/0:27,0:27:78.21:0,78,912	0/0:21,0:21:60.16:0,60,707	1/1:1,23:24:60.20:840,60,0	1/1:0,20:20:57.19:798,57,0	1/1:2,19:21:51.17:713,51,0	1/1:2,22:24:57.19:798,57,0	1/1:3,15:18:45.15:626,45,0	1/1:0,25:25:66.22:923,66,0	1/1:5,33:38:99:1364,99,0	1/1:3,24:27:66.22:916,66,0	1/1:1,22:23:63.05:860,63,0	1/1:2,31:33:78.26:1092,78,0	1/1:2,22:24:60.20:840,60,0	1/1:1,27:28:84.25:1139,84,0	1/1:3,28:31:75.09:1050,75,0	1/1:0,7:7:21.07:294,21,0
chr10	58219855	.	GTT	G	8042.69	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=6.538;DP=510;FS=6.566;HRun=9;HaplotypeScore=98.2270;InbreedingCoeff=0.9841;MQ=70.56;MQ0=7;MQRankSum=-3.283;QD=26.54;ReadPosRankSum=0.318;VQSLOD=4.5572;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,18:20:45.12:523,45,0	1/1:2,8:10:18.04:210,18,0	0/0:14,0:9:15:0,15,173	0/0:12,0:9:8.07:0,8,99	1/1:3,26:29:78.23:906,78,0	0/0:23,0:23:60.19:0,60,962	0/0:12,0:12:24.07:0,24,369	1/1:12,24:36:72.18:828,72,0	1/1:4,7:11:24.05:269,24,0	1/1:3,22:22:63.18:725,63,0	1/1:3,12:14:39.11:454,39,0	0/0:16,0:16:45.15:0,45,729	0/0:20,0:22:53.67:0,54,835	0/0:12,0:12:30.10:0,30,492	1/1:5,8:11:18.04:199,18,0	0/0:23,0:23:57.19:0,57,936	1/1:3,19:21:48.14:559,48,0	0/0:11,0:11:27.09:0,27,443	1/1:7,12:19:31.83:412,32,0	1/1:7,13:19:45.13:524,45,0	1/1:2,9:10:27.08:315,27,0	0/0:18,0:18:51.17:0,51,837	0/0:26,0:26:74.74:0,75,1184	0/0:18,0:18:39.13:0,39,640	1/1:3,21:24:66.17:757,66,0	1/1:2,14:16:42.11:489,42,0	1/1:4,19:22:54.15:629,54,0	1/1:3,5:7:21.06:244,21,0
chr10	58219868	.	G	GA	10017.16	PASS	AB=0.824;AC=42;AF=0.750;AN=56;BaseQRankSum=-6.905;DP=513;FS=0.000;HRun=9;HaplotypeScore=89.5042;InbreedingCoeff=0.8101;MQ=69.53;MQ0=7;MQRankSum=-1.795;QD=25.04;ReadPosRankSum=1.877;VQSLOD=5.0870;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,16:19:13.05:367,13,0	0/0:9,0:9:20.98:0,21,178	0/0:14,0:10:12.02:0,12,78	0/1:10,0:7:9.95:10,0,18	1/1:5,25:30:69.17:750,69,0	1/1:4,20:25:54.13:588,54,0	1/1:1,7:8:21.06:232,21,0	0/0:32,0:32:83.91:0,84,721	1/1:1,9:9:27.04:286,27,0	1/1:7,22:27:40.23:671,40,0	1/1:6,11:16:36.09:388,36,0	1/1:2,16:18:48.13:531,48,0	0/0:22,0:22:26.63:0,27,392	0/0:11,0:12:26.01:0,26,214	0/1:5,6:8:7.99:146,0,8	1/1:0,23:23:63.17:697,63,0	0/0:24,0:23:47.95:0,48,414	1/1:1,10:11:27.07:299,27,0	1/1:7,8:16:9.70:293,10,0	1/1:5,12:18:50.11:476,50,0	1/1:2,10:11:27.07:299,27,0	1/1:0,18:18:54.11:584,54,0	1/1:3,25:28:75.20:830,75,0	1/1:1,20:21:48.13:531,48,0	1/1:3,22:25:63.17:693,63,0	1/1:1,17:18:48.11:519,48,0	1/1:4,18:21:54.15:596,54,0	1/1:2,7:8:21.06:232,21,0
chr10	58220053	.	GAGAGAGAGAA	G	1107.80	PASS	AB=1.000;AC=30;AF=0.577;AN=52;BaseQRankSum=0.707;DP=422;FS=3.167;HRun=0;HaplotypeScore=106.1211;InbreedingCoeff=0.0744;MQ=48.09;MQ0=16;MQRankSum=-0.821;QD=4.00;ReadPosRankSum=-0.025;VQSLOD=1.7034;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:23:31.44:110,0,31	./.	1/1:5,0:1:2.04:6,2,0	./.	0/0:16,0:14:2.57:0,3,10	0/0:24,0:23:11.37:0,11,154	0/1:28,0:27:6.79:7,0,286	1/1:2,0:2:2.93:19,3,0	1/1:5,8:13:6.02:143,6,0	0/1:12,0:12:36.08:119,0,36	1/1:11,0:10:5.99:50,6,0	0/1:18,0:17:30.41:30,0,68	0/0:13,0:13:16.52:0,17,226	0/0:14,0:14:31.11:0,31,347	1/1:6,0:5:8.56:74,9,0	1/1:20,0:20:5.34:68,5,0	0/1:5,0:5:8.15:39,0,8	0/1:16,0:16:20.60:21,0,87	1/1:7,0:7:9.08:95,9,0	0/1:11,0:11:10.35:10,0,34	1/1:30,0:28:3.25:150,3,0	0/1:13,0:12:4.91:5,0,79	0/0:22,0:22:8.92:0,9,65	0/0:46,0:45:33.58:0,34,444	1/1:12,0:12:4.84:45,5,0	0/1:17,0:15:4.97:60,0,5	0/1:16,0:15:61.70:172,0,62	1/1:9,0:6:5.48:43,5,0
chr10	58220064	.	AGAGAGG	A	1164.83	PASS	AB=0.803;AC=20;AF=0.370;AN=54;BaseQRankSum=2.089;DP=401;FS=9.652;HRun=0;HaplotypeScore=86.1197;InbreedingCoeff=0.5686;MQ=50.64;MQ0=16;MQRankSum=-4.074;QD=5.18;ReadPosRankSum=0.141;VQSLOD=1.0059;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:23:30.31:0,30,232	./.	0/0:7,0:3:8.94:0,9,125	0/1:13,0:4:0.53:1,0,41	0/0:15,0:13:3.01:0,3,38	0/1:7,14:21:24.31:71,0,24	1/1:11,22:32:11.95:136,12,0	0/0:5,0:5:1.64:0,2,4	1/1:9,0:9:5.92:38,6,0	0/0:10,0:10:21.29:0,21,197	0/0:8,0:7:12.01:0,12,108	1/1:6,16:21:14.66:228,15,0	0/0:16,0:16:20.10:0,20,402	0/0:16,0:16:33.07:0,33,835	0/0:9,0:8:16.25:0,16,137	1/1:8,13:21:22.77:276,23,0	1/1:7,0:6:8.82:54,9,0	1/1:8,6:14:14.62:193,15,0	0/0:6,0:5:11.96:0,12,97	0/0:7,0:7:11.91:0,12,110	0/0:26,0:24:39.32:0,39,334	1/1:5,7:11:17.63:246,18,0	1/1:3,13:16:5.98:60,6,0	0/1:17,29:45:33.36:36,0,33	0/0:8,0:7:8.90:0,9,106	0/0:9,0:7:11.84:0,12,118	0/1:11,0:11:11.25:11,0,65	0/0:6,0:4:5.98:0,6,47
chr10	58220080	.	A	AG	103.74	PASS	AB=1.000;AC=4;AF=0.071;AN=56;BaseQRankSum=3.254;DP=490;FS=0.000;HRun=3;HaplotypeScore=87.6537;InbreedingCoeff=0.5751;MQ=57.69;MQ0=8;MQRankSum=-3.145;QD=3.35;ReadPosRankSum=0.290;VQSLOD=-0.0140;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:26:45.61:0,46,507	0/1:2,0:1:0:0,0,0	0/0:16,0:8:21.06:0,21,250	0/0:19,0:10:3.47:0,3,147	0/0:11,0:11:12.03:0,12,140	0/0:19,0:19:18.04:0,18,193	0/0:34,0:33:27:0,27,300	0/1:13,0:12:8.50:77,0,8	0/0:15,0:14:24.06:0,24,273	0/0:22,0:20:51.16:0,51,610	0/0:9,0:9:18.04:0,18,204	0/0:22,0:22:23.77:0,24,212	0/0:18,0:18:39.12:0,39,467	0/0:18,0:18:54.14:0,54,625	0/0:16,0:15:34.18:0,34,365	0/0:22,0:22:30.60:0,31,270	1/1:8,8:13:12.02:126,12,0	0/0:10,0:10:20.72:0,21,178	0/0:11,0:10:27.08:0,27,323	0/0:8,0:8:15.05:0,15,180	0/0:31,0:31:61.42:0,61,712	0/0:12,0:12:26.90:0,27,290	0/0:17,0:17:15.04:0,15,175	0/0:45,0:45:26.97:0,27,280	0/0:10,0:9:18.04:0,18,197	0/0:20,0:18:36.11:0,36,431	0/0:12,0:12:27.01:0,27,289	0/0:14,0:13:21.02:0,21,215
chr10	58220083	.	GAGA	G	282.46	PASS	AB=0.833;AC=6;AF=0.107;AN=56;BaseQRankSum=5.092;DP=509;FS=3.698;HRun=0;HaplotypeScore=89.9745;InbreedingCoeff=0.6806;MQ=61.31;MQ0=8;MQRankSum=-4.370;QD=6.42;ReadPosRankSum=0.812;VQSLOD=2.3656;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:26:52.89:0,53,971	0/1:1,1:1:0:0,0,0	0/0:17,0:10:30.10:0,30,540	0/0:23,0:14:32.90:0,33,470	0/0:13,0:13:27.08:0,27,423	0/0:18,0:18:16.64:0,17,149	0/0:32,0:31:17.10:0,17,275	1/1:15,0:14:17.40:203,17,0	0/0:16,0:15:30.07:0,30,485	0/0:22,0:20:60.20:0,60,1066	0/0:11,0:11:30.10:0,30,535	0/0:22,0:22:0.80:0,1,225	0/0:16,0:16:39.13:0,39,802	0/0:20,0:20:60.20:0,60,1219	0/0:17,0:16:37.37:0,37,704	0/0:21,0:21:5.01:0,5,241	1/1:14,4:15:20.64:196,21,0	0/1:9,0:9:3:3,0,108	0/0:14,0:13:36.12:0,36,615	0/0:9,0:9:24.08:0,24,473	0/0:32,0:32:69.66:0,70,1319	0/0:10,0:10:17.31:0,17,173	0/0:17,0:17:17.42:0,17,212	0/0:45,0:45:21.34:0,21,355	0/0:12,0:11:27.06:0,27,448	0/0:19,0:18:48.16:0,48,932	0/0:13,0:13:35.95:0,36,550	0/0:18,0:17:45.15:0,45,682
chr10	58220811	.	ATG	A	1427.18	PASS	AB=0.905;AC=34;AF=0.654;AN=52;BaseQRankSum=4.139;DP=524;FS=6.169;HRun=0;HaplotypeScore=73.0506;InbreedingCoeff=0.5452;MQ=63.19;MQ0=10;MQRankSum=-0.607;QD=3.95;ReadPosRankSum=1.949;VQSLOD=1.5313;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:23,12:36:2.07:202,0,2	1/1:7,0:7:1.82:5,2,0	./.	./.	1/1:13,3:16:3:32,3,0	0/1:17,2:19:8.24:8,0,283	0/1:28,1:28:36.94:37,0,245	0/1:21,0:20:0:0,0,0	1/1:9,5:15:11.86:111,12,0	1/1:13,1:15:5.85:46,6,0	1/1:13,1:14:3.01:32,3,0	0/0:18,0:18:15.05:0,15,193	0/0:14,0:17:21.01:0,21,231	0/0:15,0:15:9.03:0,9,131	1/1:8,3:14:17.71:157,18,0	0/0:13,0:13:19.57:0,20,209	1/1:20,1:30:22.89:130,23,0	1/1:6,3:10:14.36:135,14,0	1/1:12,0:12:2.68:11,3,0	1/1:16,1:18:13.88:108,14,0	1/1:27,5:30:3.01:32,3,0	0/0:21,0:20:6.01:0,6,68	0/0:11,0:14:12.01:0,12,129	0/0:10,0:23:15:0,15,131	1/1:21,4:27:17.74:173,18,0	1/1:17,1:17:11.70:92,12,0	1/1:13,7:21:23.89:240,24,0	1/1:3,1:5:5.85:46,6,0
chr10	58221088	.	G	GA	2117.16	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-9.591;DP=642;FS=3.839;HRun=6;HaplotypeScore=63.9045;InbreedingCoeff=0.9814;MQ=83.00;MQ0=0;MQRankSum=-3.372;QD=31.60;ReadPosRankSum=2.236;VQSLOD=4.3991;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,40:42:99:1391,111,0	0/0:15,0:15:45.10:0,45,458	0/0:27,0:26:67.28:0,67,629	0/0:17,0:15:20.39:0,20,260	1/1:1,24:25:69.15:848,69,0	0/0:28,0:28:78.16:0,78,788	0/0:21,0:21:57.10:0,57,569	0/0:27,0:27:69.14:0,69,699	0/0:20,0:20:60.11:0,60,599	0/0:17,0:17:48.09:0,48,480	0/0:10,0:10:27.06:0,27,275	0/0:30,0:30:84.18:0,84,852	0/0:14,0:14:39.08:0,39,392	0/0:26,0:26:72.15:0,72,727	0/0:29,0:29:84.19:0,84,855	0/0:32,0:32:96.21:0,96,973	0/0:19,0:19:48.10:0,48,490	0/0:19,0:19:54.12:0,54,551	0/0:15,0:15:39.05:0,39,381	0/0:28,0:28:71.75:0,72,713	0/0:24,0:24:63.12:0,63,634	0/0:18,0:18:48.10:0,48,488	0/0:19,0:19:56.80:0,57,562	0/0:27,0:27:78.18:0,78,795	0/0:35,0:35:99:0,99,995	0/0:31,0:31:84.17:0,84,846	0/0:23,0:23:66.10:0,66,652	0/0:4,0:4:12.03:0,12,122
chr10	58221832	.	GC	G	2422.03	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=2.399;DP=564;FS=8.663;HRun=1;HaplotypeScore=94.8237;InbreedingCoeff=0.9616;MQ=82.93;MQ0=0;MQRankSum=-1.511;QD=36.70;ReadPosRankSum=0.378;VQSLOD=3.3413;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,129,2057	1/1:0,8:8:24.08:335,24,0	0/0:15,1:16:25.44:0,25,546	0/0:17,0:17:42.59:0,43,590	0/0:22,0:22:60.16:0,60,932	0/0:15,0:15:45.15:0,45,708	0/0:14,0:14:42.14:0,42,666	1/1:0,19:19:57.18:763,57,0	0/0:18,0:18:54.18:0,54,857	0/0:19,0:19:57.19:0,57,891	0/0:9,0:9:27.09:0,27,425	0/0:25,0:25:75.26:0,75,1196	0/0:21,0:21:63.21:0,63,995	0/0:23,0:23:66.22:0,66,1046	0/0:16,0:16:48.16:0,48,763	0/0:20,0:20:60.20:0,60,953	1/1:0,39:39:99:1467,105,0	0/0:24,0:24:72.25:0,72,1151	0/0:14,0:14:42.11:0,42,642	0/0:9,0:9:27.09:0,27,430	0/0:54,0:54:99:0,156,2422	0/0:20,0:20:60.20:0,60,955	0/0:11,0:11:33.11:0,33,528	0/0:24,0:24:69.15:0,69,1023	0/0:24,0:24:72.25:0,72,1145	0/0:25,0:25:75.26:0,75,1196	0/0:11,0:11:33.11:0,33,525	0/0:2,0:2:6.02:0,6,96
chr10	58221943	.	AGTGTGTGT	A	1776.05	PASS	AB=0.803;AC=28;AF=0.538;AN=52;BaseQRankSum=5.057;DP=569;FS=13.619;HRun=0;HaplotypeScore=149.9059;InbreedingCoeff=0.0750;MQ=52.92;MQ0=7;MQRankSum=-4.189;QD=4.36;ReadPosRankSum=3.612;VQSLOD=2.0636;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:38:19.78:0,20,215	1/1:5,0:10:2.63:16,3,0	./.	./.	0/0:15,0:15:8.62:0,9,89	1/1:10,4:14:1.42:72,1,0	0/1:22,7:29:18.02:69,0,18	0/0:20,0:19:11.84:0,12,78	1/1:5,0:14:3.90:27,4,0	0/1:12,0:18:14.58:25,0,15	1/1:13,0:12:1.25:3,1,0	1/1:8,10:19:3.04:250,3,0	0/0:14,0:14:30.55:0,31,829	0/0:21,0:21:27.12:0,27,937	1/1:10,0:14:5.14:25,5,0	1/1:14,2:19:21.53:402,22,0	0/1:27,1:28:65.92:185,0,66	0/1:17,13:30:14.94:251,0,15	0/0:9,0:9:3:0,3,26	0/1:16,1:20:0.71:1,0,21	0/1:41,0:41:96.60:103,0,97	1/1:9,12:23:3.01:56,3,0	0/1:2,4:6:0.40:1,0,0	0/1:27,16:45:10.76:214,0,11	1/1:17,4:22:3.19:87,3,0	0/1:24,0:23:10.04:10,0,40	0/1:9,0:16:9.18:131,0,9	0/0:2,0:2:2.04:0,2,6
chr10	58222403	.	ATCTCTCTCTCTCTC	A	6392.24	PASS	AC=20;AF=0.370;AN=54;BaseQRankSum=5.794;DP=594;FS=5.003;HRun=0;HaplotypeScore=192.0783;InbreedingCoeff=0.8565;MQ=59.84;MQ0=21;MQRankSum=-8.055;QD=41.78;ReadPosRankSum=1.808;VQSLOD=4.1944;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:29.70:0,30,1764	0/0:6,0:7:12.04:0,12,700	0/0:81,0:22:7.38:0,7,214	0/0:94,0:21:7:0,7,93	0/0:20,0:22:42.14:0,42,2359	0/0:15,0:17:11.63:0,12,594	0/0:25,0:30:27.26:0,27,1330	0/0:25,0:25:27.09:0,27,1239	1/1:10,2:12:6.02:238,6,0	1/1:17,4:21:12.03:425,12,0	1/1:11,5:16:12.04:476,12,0	0/0:14,0:20:14.97:0,15,863	0/0:10,0:12:24.07:0,24,1132	0/0:14,0:15:36.12:0,36,2121	1/1:8,8:17:18.06:693,18,0	0/0:17,0:17:11.40:0,11,514	0/0:12,0:14:24.06:0,24,1184	0/0:9,0:9:12.04:0,12,641	1/1:6,4:10:12.04:476,12,0	1/1:5,8:15:24.08:910,24,0	1/1:4,1:5:3.01:119,3,0	0/0:25,0:25:25.62:0,26,1331	0/0:9,0:9:12.04:0,12,668	0/0:5,0:8:1.67:0,2,22	1/1:7,9:17:21.07:812,21,0	1/1:10,10:20:27.08:1072,27,0	1/1:9,10:20:30.10:1170,30,0	./.
chr10	58222449	.	A	AACACACAC	4337.21	PASS	AB=0.904;AC=25;AF=0.446;AN=56;BaseQRankSum=1.631;DP=469;FS=0.658;HRun=0;HaplotypeScore=210.4472;InbreedingCoeff=0.6816;MQ=52.07;MQ0=9;MQRankSum=-4.503;QD=18.38;ReadPosRankSum=-0.087;VQSLOD=3.4745;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:16,9:27:0.01:0,0,0	1/1:2,0:5:3.01:116,3,0	0/0:29,0:16:21.05:0,21,335	0/0:43,0:17:21.49:0,21,398	1/1:19,0:20:14.01:520,14,0	0/0:14,0:13:10.94:0,11,89	0/0:30,0:30:35.91:0,36,799	1/1:15,0:15:21.07:484,21,0	1/1:9,0:15:3.87:91,4,0	1/1:17,0:17:27.09:741,27,0	0/0:17,0:17:0.20:0,0,1	0/0:12,0:12:9.03:0,9,223	0/0:8,0:8:15.01:0,15,222	0/0:21,0:21:5.70:0,6,969	1/1:20,0:21:3.01:43,3,0	0/0:4,0:4:9.03:0,9,217	1/1:6,0:11:3.01:68,3,0	0/0:5,0:5:9.03:0,9,201	1/1:16,0:15:23.90:561,24,0	0/1:20,0:18:0.02:0,0,0	0/1:13,0:11:0:0,0,0	0/0:14,0:14:17.27:0,17,348	0/0:9,0:8:13.86:0,14,302	0/0:6,0:6:0.15:0,0,1	0/0:20,0:20:1.35:0,1,3	1/1:30,0:30:51.11:1214,51,0	1/1:21,0:21:15.58:379,16,0	1/1:1,0:2:3.01:121,3,0
chr10	58222461	.	CAGAGAGAGAGAGAG	C	933.76	PASS	AC=12;AF=0.240;AN=50;BaseQRankSum=2.044;DP=475;FS=13.777;HRun=0;HaplotypeScore=217.6514;InbreedingCoeff=0.6333;MQ=50.97;MQ0=9;MQRankSum=-2.290;QD=11.67;ReadPosRankSum=0.327;VQSLOD=1.2214;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:22:12.04:0,12,573	0/0:7,0:7:6.02:0,6,283	./.	./.	0/0:21,0:21:21.06:0,21,609	1/1:5,6:11:12.04:446,12,0	1/1:30,0:30:7.83:120,8,0	0/0:21,0:21:17.69:0,18,306	0/0:19,0:19:8.73:0,9,257	0/0:14,0:14:12.04:0,12,496	0/0:17,0:17:2.08:0,2,196	1/1:10,0:11:6.01:123,6,0	0/0:7,0:7:12.04:0,12,631	0/0:16,0:23:15.05:0,15,832	0/0:24,0:24:12.51:0,13,742	0/0:6,0:6:15.05:0,15,858	0/0:13,0:12:15.15:0,15,500	1/1:4,0:4:2.22:23,2,0	0/0:22,0:18:24.08:0,24,1280	0/0:22,0:20:2.43:0,2,174	./.	1/1:11,2:14:6.49:214,6,0	1/1:6,3:8:5.77:154,6,0	0/0:6,0:5:0:0,0,0	0/0:20,0:19:1.16:0,1,177	0/0:36,0:35:72.25:0,72,2898	0/0:25,0:24:21.57:0,22,1010	0/0:2,0:2:3.01:0,3,130
chr10	58223176	.	C	CT	1414.08	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=-9.305;DP=603;FS=1.153;HRun=8;HaplotypeScore=66.1039;InbreedingCoeff=0.7551;MQ=77.19;MQ0=1;MQRankSum=0.286;QD=18.85;ReadPosRankSum=-1.260;VQSLOD=3.1854;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:47.98:0,48,433	1/1:2,10:12:6.43:316,6,0	0/0:14,0:15:15:0,15,137	0/1:14,0:13:13.56:14,0,135	0/0:33,1:34:61.38:0,61,803	0/0:23,0:23:66.03:0,66,604	0/0:20,0:20:48.02:0,48,439	1/1:8,18:26:54.13:602,54,0	0/0:26,0:26:72.03:0,72,659	0/0:18,0:18:48.02:0,48,439	0/0:21,0:21:54.03:0,54,494	0/0:21,0:21:60.02:0,60,545	0/0:22,0:22:51.01:0,51,467	0/0:27,0:27:69.03:0,69,631	0/0:27,0:28:77.04:0,77,683	0/0:20,0:20:54:0,54,490	1/1:3,20:23:54.16:623,54,0	0/0:24,0:23:66.04:0,66,603	0/0:24,0:24:60.01:0,60,542	0/0:26,0:26:72.02:0,72,654	0/0:25,0:25:75.04:0,75,686	0/0:24,0:24:65.99:0,66,594	0/0:22,0:22:60.01:0,60,544	0/0:16,0:16:45.02:0,45,412	0/0:18,1:19:16.39:0,16,401	0/0:23,0:23:69.03:0,69,628	0/0:30,0:30:90.05:0,90,824	0/0:1,0:1:3:0,3,27
chr10	58223654	.	AGTGTGTGTGT	A	1169.89	PASS	AB=0.898;AC=19;AF=0.352;AN=54;BaseQRankSum=5.311;DP=651;FS=17.275;HRun=0;HaplotypeScore=175.5961;InbreedingCoeff=0.6012;MQ=63.56;MQ0=25;MQRankSum=-5.723;QD=4.29;ReadPosRankSum=0.453;VQSLOD=1.9361;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:28:20.72:0,21,261	0/1:3,1:4:18.84:78,0,19	./.	0/1:53,0:20:0:0,0,0	0/0:13,0:12:6.01:0,6,73	1/1:16,0:15:3:35,3,0	1/1:29,0:31:9.93:159,10,0	0/0:28,0:27:7.49:0,7,44	0/0:19,0:19:30.10:0,30,914	0/0:18,0:18:19.59:0,20,445	0/0:14,0:14:15.05:0,15,354	1/1:25,1:28:5.71:157,6,0	0/0:20,0:20:24.08:0,24,644	0/0:23,0:22:24.08:0,24,835	0/0:24,0:24:15.04:0,15,539	1/1:19,4:23:6.02:175,6,0	0/1:22,0:25:20.73:21,0,63	1/1:17,4:21:3.69:257,4,0	0/0:15,0:15:6.02:0,6,227	0/0:14,0:12:12.04:0,12,491	0/0:36,0:36:32.50:0,32,1106	1/1:12,6:19:6.02:158,6,0	1/1:17,8:24:5.62:143,6,0	1/1:21,4:27:8.69:158,9,0	0/0:14,0:15:15.05:0,15,491	0/0:32,0:31:39.13:0,39,1247	0/0:16,0:13:12:0,12,305	0/0:13,0:12:15.05:0,15,646
chr10	58224618	.	A	AGGTTGATTTAT	1197.01	PASS	AB=0.762;AC=14;AF=0.875;AN=16;BaseQRankSum=-1.465;DP=31;FS=6.043;HRun=0;HaplotypeScore=19.1735;MQ=162.35;MQ0=0;MQRankSum=-0.992;QD=59.85;ReadPosRankSum=-0.425;VQSLOD=1.8889;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/1:5,0:6:82.04:448,0,82	0/1:3,1:6:14.25:404,0,14	./.	./.	1/1:1,0:1:3.01:52,3,0	1/1:1,0:1:3.01:52,3,0	./.	./.	./.	./.	1/1:1,0:1:3.01:49,3,0	./.	1/1:3,0:3:9.03:128,9,0	./.	./.	./.	1/1:1,0:1:3.01:52,3,0	./.	./.	./.	./.	./.	./.	./.	1/1:1,0:1:3.01:93,3,0	./.
chr10	58224789	.	GGTAGT	G	248.19	PASS	AB=0.984;AC=17;AF=0.304;AN=56;BaseQRankSum=0.352;DP=517;FS=22.504;HRun=0;HaplotypeScore=204.1210;InbreedingCoeff=-0.2838;MQ=47.73;MQ0=0;MQRankSum=9.296;QD=0.90;ReadPosRankSum=-6.564;VQSLOD=-0.6524;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:18,0:18:20.79:21,0,21	0/0:15,0:15:17.44:0,17,50	1/1:11,0:7:11.57:39,12,0	0/1:13,0:11:29.96:30,0,51	0/0:32,0:32:23.14:0,23,82	0/1:23,0:23:4.51:5,0,36	0/0:14,0:14:17.57:0,18,46	0/1:18,0:18:26.33:26,0,92	0/1:14,0:13:10.59:11,0,14	0/0:30,0:30:23.25:0,23,91	0/1:21,1:22:32.64:33,0,47	0/1:16,0:16:17.21:17,0,29	0/1:21,0:19:3.65:4,0,42	0/1:24,0:23:25.37:25,0,37	0/0:19,0:19:0.91:0,1,41	0/1:23,0:23:25.64:56,0,26	0/1:15,0:15:8.15:8,0,19	0/1:6,0:6:9.80:10,0,17	0/1:10,2:12:37.93:53,0,38	0/0:23,0:23:24.37:0,24,80	0/0:23,0:23:3.88:0,4,16	0/0:22,0:22:5.97:0,6,49	0/1:23,0:23:3.78:4,0,33	0/0:6,0:5:2.85:0,3,8	0/0:26,0:26:0.21:0,0,30	0/1:17,1:18:42.08:54,0,42	0/0:28,0:28:11.12:0,11,72	0/0:2,0:2:1.27:0,1,3
chr10	58224790	.	GTA	G	10074.92	PASS	AB=0.927;AC=52;AF=0.929;AN=56;BaseQRankSum=4.070;DP=515;FS=7.777;HRun=0;HaplotypeScore=144.5066;InbreedingCoeff=-0.0775;MQ=47.84;MQ0=0;MQRankSum=-0.356;QD=19.56;ReadPosRankSum=4.281;VQSLOD=5.0607;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:19:38.93:326,39,0	1/1:15,0:15:44.85:363,45,0	1/1:11,0:7:21.86:114,22,0	0/1:13,0:11:65.83:70,0,66	1/1:31,0:32:83.69:704,84,0	1/1:23,0:23:56.35:455,56,0	1/1:15,0:15:35.93:298,36,0	0/1:14,3:17:34.77:224,0,35	1/1:15,0:14:29.98:258,30,0	1/1:29,0:29:46.37:562,46,0	1/1:22,0:22:59.50:474,60,0	1/1:16,0:16:41.92:351,42,0	1/1:22,0:20:56.38:466,56,0	1/1:24,0:23:65.84:551,66,0	1/1:19,0:19:56.69:476,57,0	1/1:23,0:23:59.95:515,60,0	1/1:15,0:15:38.85:311,39,0	0/1:5,1:6:4.98:72,0,5	0/1:12,0:12:12.03:142,0,12	1/1:23,0:23:65.78:538,66,0	1/1:23,0:23:44.60:331,45,0	1/1:22,1:23:59.55:454,60,0	1/1:22,0:22:62.69:501,63,0	1/1:5,0:4:8.95:69,9,0	1/1:23,1:24:68.52:525,69,0	1/1:17,0:17:24.76:300,25,0	1/1:28,0:28:57.82:580,58,0	1/1:2,0:2:5.96:45,6,0
chr10	58224794	.	T	TG	7106.88	PASS	AB=1.000;AC=55;AF=0.982;AN=56;BaseQRankSum=-1.042;DP=504;FS=5.701;HRun=1;HaplotypeScore=147.3859;InbreedingCoeff=-0.0219;MQ=48.90;MQ0=0;MQRankSum=-1.322;QD=14.10;ReadPosRankSum=1.836;VQSLOD=4.4566;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:18,3:21:42.47:263,42,0	1/1:15,0:15:41.73:202,42,0	1/1:10,0:7:23.74:174,24,0	0/1:13,0:11:6.73:160,0,7	1/1:31,0:31:77.19:371,77,0	1/1:22,0:22:52.85:277,53,0	1/1:15,1:16:33.33:155,33,0	1/1:11,3:14:12.11:226,12,0	1/1:12,2:13:30.94:174,31,0	1/1:25,3:29:82.64:483,83,0	1/1:21,0:21:48.99:266,49,0	1/1:16,0:16:38.83:230,39,0	1/1:22,0:20:55.19:290,55,0	1/1:23,2:24:61.42:369,61,0	1/1:20,0:20:55.46:284,55,0	1/1:21,0:21:56.58:370,57,0	1/1:16,0:16:39.72:229,40,0	1/1:5,1:6:14.61:107,15,0	1/1:10,0:10:28.91:191,29,0	1/1:24,0:24:60.03:279,60,0	1/1:20,0:20:42.95:233,43,0	1/1:23,0:23:56.69:342,57,0	1/1:22,0:22:60.13:321,60,0	1/1:6,0:5:8.39:43,8,0	1/1:22,1:23:64.95:366,65,0	1/1:16,0:16:42.91:303,43,0	1/1:26,0:26:70.37:370,70,0	1/1:2,0:2:5.74:31,6,0
chr10	58224890	.	TAC	T	32.01	PASS	AB=0.964;AC=16;AF=0.296;AN=54;BaseQRankSum=3.708;DP=477;FS=1.275;HRun=0;HaplotypeScore=120.5027;InbreedingCoeff=0.3828;MQ=50.81;MQ0=10;MQRankSum=0.817;QD=0.19;ReadPosRankSum=-0.512;VQSLOD=2.1630;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:26:2.26:30,2,0	0/0:7,0:7:10.25:0,10,87	0/0:25,0:9:0:0,0,0	0/0:25,0:10:5.23:0,5,47	0/0:12,0:12:5.98:0,6,47	0/0:25,0:24:17.51:0,18,222	0/0:18,0:15:13.49:0,13,232	0/0:20,0:18:12.47:0,12,102	1/1:12,0:12:1.25:3,1,0	1/1:15,0:15:1.53:4,2,0	./.	0/0:17,0:16:18.06:0,18,269	0/0:16,0:15:29.82:0,30,341	0/1:21,1:21:8.03:8,0,317	0/1:12,0:12:0.02:0,0,0	0/0:9,0:9:9.01:0,9,117	0/0:26,0:26:18.82:0,19,182	0/1:16,0:16:46.09:46,0,221	1/1:14,0:13:6.84:30,7,0	1/1:22,0:22:5.78:21,6,0	0/0:17,0:17:0.94:0,1,2	0/0:14,1:15:18.05:0,18,282	0/1:16,2:18:11.01:11,0,303	0/0:17,2:17:6.02:0,6,89	0/0:14,0:13:0.93:0,1,2	0/0:15,0:15:0.07:0,0,0	1/1:15,0:15:2.59:11,3,0	0/0:5,0:5:5.96:0,6,44
chr10	58224905	.	ACACACACACACTCACACACACT	A	3187.36	PASS	AB=1.000;AC=26;AF=0.481;AN=54;BaseQRankSum=-1.558;DP=476;FS=19.737;HRun=0;HaplotypeScore=212.1676;InbreedingCoeff=0.7087;MQ=43.05;MQ0=20;MQRankSum=-0.697;QD=15.03;ReadPosRankSum=0.766;VQSLOD=1.3379;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:18:20.98:240,21,0	0/0:7,0:7:12.04:0,12,623	0/0:15,0:1:0:0,0,0	0/1:19,0:4:6:6,0,16	1/1:11,0:11:9:146,9,0	0/0:26,0:25:2.01:0,2,452	0/0:18,0:15:16.91:0,17,907	0/1:28,0:22:0.18:0,0,746	1/1:12,0:12:3.48:108,3,0	1/1:12,0:11:18.05:242,18,0	./.	0/0:16,0:15:16.86:0,17,519	0/0:19,0:18:36.86:0,37,2647	0/0:24,0:23:39.09:0,39,2925	1/1:10,0:10:6.01:74,6,0	0/0:11,0:11:15.05:0,15,612	0/0:33,0:32:20.15:0,20,705	0/0:19,0:19:1.36:0,1,1632	1/1:4,7:9:21.04:556,21,0	1/1:1,27:28:15.05:649,15,0	1/1:18,0:14:12.02:211,12,0	0/0:15,0:15:17.77:0,18,1015	0/0:17,0:17:25.97:0,26,726	0/0:21,0:19:7.10:0,7,261	1/1:14,0:13:12.03:335,12,0	1/1:12,0:12:33.11:500,33,0	1/1:3,11:14:3.48:176,3,0	1/1:5,0:5:12.02:137,12,0
chr10	58224907	.	ACACACACACTCACACACACT	A	3079.67	PASS	AB=1.000;AC=29;AF=0.537;AN=54;BaseQRankSum=-0.790;DP=469;FS=18.536;HRun=0;HaplotypeScore=198.5822;InbreedingCoeff=0.5986;MQ=43.15;MQ0=20;MQRankSum=-1.427;QD=11.67;ReadPosRankSum=-0.129;VQSLOD=1.1292;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:19:24.03:337,24,0	0/0:7,0:7:12.04:0,12,558	0/1:14,0:1:0:0,0,0	0/1:19,0:4:6.02:6,0,16	1/1:11,0:11:9:132,9,0	0/1:24,0:23:20.19:20,0,380	0/0:17,0:14:16.12:0,16,765	0/1:27,0:21:6.73:7,0,569	1/1:1,11:12:3.48:152,3,0	1/1:9,0:8:18.05:242,18,0	./.	0/0:16,0:15:17.17:0,17,481	0/0:20,0:19:39.66:0,40,2356	0/0:26,0:25:45.11:0,45,2800	1/1:9,0:9:6.01:74,6,0	0/0:11,0:11:15.05:0,15,542	0/0:34,0:33:20.13:0,20,630	0/1:19,0:19:27.95:28,0,1466	1/1:10,0:8:21.02:474,21,0	1/1:28,0:28:15.05:517,15,0	1/1:17,0:13:15.03:246,15,0	0/0:15,0:15:17.80:0,18,891	0/0:16,0:17:25.93:0,26,649	0/0:20,0:18:7.23:0,7,213	1/1:15,0:14:12.03:259,12,0	1/1:12,0:12:33.11:500,33,0	1/1:14,0:14:3.01:143,3,0	1/1:5,0:5:12.02:137,12,0
chr10	58225279	.	CACACACACAT	C	2284.77	PASS	AB=1.000;AC=25;AF=0.481;AN=52;BaseQRankSum=10.780;DP=556;FS=23.221;HRun=0;HaplotypeScore=144.5014;InbreedingCoeff=0.8098;MQ=56.85;MQ0=26;MQRankSum=1.390;QD=10.43;ReadPosRankSum=-0.266;VQSLOD=0.8975;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:27:44.57:337,45,0	1/1:3,0:3:8.95:68,9,0	0/0:41,0:8:5.37:0,5,36	0/0:41,0:8:2.06:0,2,30	1/1:18,0:14:20.94:165,21,0	0/0:20,0:20:50.85:0,51,519	0/0:20,0:19:33.29:0,33,312	1/1:7,0:6:11.96:98,12,0	1/1:3,12:14:2.73:18,3,0	1/1:15,0:15:29.80:223,30,0	0/0:2,10:13:3:0,3,26	0/0:24,0:23:41.27:0,41,408	0/0:22,0:22:45.31:0,45,757	0/0:27,0:25:42.02:0,42,871	./.	0/0:19,0:19:41.55:0,42,334	1/1:23,0:21:25.18:185,25,0	0/0:17,0:17:35.62:0,36,424	1/1:12,0:10:23.83:173,24,0	0/1:10,0:10:18.96:19,0,19	1/1:42,0:39:56.83:451,57,0	0/0:18,0:18:26.45:0,26,259	0/0:25,0:24:29.38:0,29,229	0/0:34,0:32:56.92:0,57,534	1/1:14,0:14:17.84:149,18,0	1/1:19,0:18:40.04:297,40,0	1/1:14,0:14:38.78:306,39,0	./.
chr10	58225287	.	CAT	C	2365.79	PASS	AB=0.920;AC=29;AF=0.558;AN=52;BaseQRankSum=11.359;DP=531;FS=1.596;HRun=0;HaplotypeScore=81.1004;InbreedingCoeff=0.4027;MQ=50.96;MQ0=28;MQRankSum=2.170;QD=7.37;ReadPosRankSum=-2.307;VQSLOD=2.9897;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:27:46.31:344,46,0	1/1:3,0:3:8.95:68,9,0	0/0:31,0:3:5.74:0,6,37	0/0:37,0:6:2.07:0,2,31	1/1:17,0:13:20.94:165,21,0	0/1:19,0:19:12.98:13,0,310	0/1:24,0:23:3.15:3,0,249	0/1:12,0:11:44.01:67,0,44	1/1:15,0:14:2.14:9,2,0	1/1:0,14:14:29.78:223,30,0	0/0:12,0:12:3:0,3,26	0/1:23,0:22:1.70:2,0,276	0/0:20,0:20:44.24:0,44,365	0/1:18,3:19:3.09:3,0,275	./.	0/0:18,0:18:41.55:0,42,334	1/1:22,0:20:26.11:186,26,0	0/1:16,0:17:48.78:49,0,166	1/1:3,8:9:23.83:174,24,0	0/1:5,8:12:18.96:19,0,19	1/1:41,0:37:59.80:471,60,0	0/0:17,0:17:4.71:0,5,151	0/0:24,0:23:8.87:0,9,206	0/0:36,0:34:15.41:0,15,410	1/1:13,0:13:17.78:149,18,0	1/1:2,14:15:41.16:302,41,0	1/1:13,0:13:38.77:297,39,0	./.
chr10	58226594	.	A	AC	27164.07	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-17.756;DP=811;FS=0.952;HRun=0;HaplotypeScore=69.0451;InbreedingCoeff=0.9991;MQ=89.60;MQ0=0;MQRankSum=-5.296;QD=44.75;ReadPosRankSum=2.854;VQSLOD=5.1241;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:59,0:59:99:0,178,2454	1/1:0,9:9:21.07:335,21,0	0/0:29,0:29:81.23:0,81,1039	0/0:29,0:30:80.93:0,81,1093	0/0:24,0:24:69.21:0,69,946	1/1:0,30:30:87.30:1390,87,0	1/1:1,21:22:57.19:911,57,0	1/1:1,32:33:93.30:1452,93,0	1/1:1,30:31:78.03:1246,78,0	1/1:0,33:33:99:1577,99,0	1/1:0,14:14:42.14:671,42,0	1/1:1,38:39:99:1774,111,0	0/0:31,0:31:93.28:0,93,1264	0/0:30,0:30:90.26:0,90,1236	1/1:0,29:29:81.04:1294,81,0	1/1:0,29:29:81.28:1295,81,0	1/1:1,28:29:84.29:1342,84,0	1/1:0,18:18:51.17:815,51,0	1/1:1,17:18:54.18:855,54,0	1/1:1,17:18:42.07:630,42,0	1/1:1,58:59:99:2589,163,0	1/1:1,27:28:78.26:1222,78,0	1/1:0,20:20:60.20:959,60,0	1/1:0,35:35:99:1582,99,0	1/1:0,29:29:87.30:1391,87,0	1/1:0,33:33:99:1583,99,0	1/1:0,39:39:99:1774,111,0	1/1:0,12:12:30.10:479,30,0
chr10	58227958	.	C	CATTCA	7501.68	PASS	AB=0.680;AC=22;AF=0.393;AN=56;BaseQRankSum=14.661;DP=655;FS=4.246;HRun=0;HaplotypeScore=158.8285;InbreedingCoeff=-0.4975;MQ=65.41;MQ0=2;MQRankSum=-4.119;QD=15.19;ReadPosRankSum=0.421;VQSLOD=4.5093;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,1:27:20.10:404,20,0	0/0:2,0:7:21.07:0,21,321	0/0:22,0:18:49.71:0,50,758	0/0:21,0:17:51.16:0,51,724	0/1:8,0:28:99:668,0,294	0/1:20,0:38:99:446,0,518	0/1:16,0:16:99:123,0,450	0/0:18,0:28:81.06:0,81,1155	0/1:6,0:17:99:307,0,107	0/1:16,0:29:99:307,0,441	0/1:6,0:21:99:265,0,248	0/1:16,1:27:99:787,0,332	0/0:29,0:30:90.25:0,90,1770	0/0:24,0:24:72.25:0,72,1527	0/1:5,0:22:99:249,0,165	0/1:5,0:14:92.71:413,0,93	0/0:10,0:28:78.26:0,78,1209	0/1:15,0:16:16.32:16,0,406	0/1:16,0:23:74.54:75,0,568	0/1:11,0:35:99:595,0,320	0/1:5,0:14:93.67:94,0,172	0/1:18,0:27:99:610,0,317	0/1:19,0:30:99:629,0,353	0/1:9,0:12:99:186,0,260	0/1:9,0:28:99:369,0,305	0/1:9,0:25:99:427,0,288	0/1:7,0:24:99:258,0,200	0/1:7,0:20:99:273,0,201
chr10	58228426	.	TTGTATGTA	T	5963.15	PASS	AB=0.802;AC=36;AF=0.643;AN=56;BaseQRankSum=4.342;DP=669;FS=4.497;HRun=0;HaplotypeScore=184.8100;InbreedingCoeff=0.6907;MQ=64.30;MQ0=5;MQRankSum=-5.581;QD=12.53;ReadPosRankSum=1.915;VQSLOD=3.7168;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:21,5:26:21.81:119,0,22	0/0:18,0:18:36.10:0,36,1270	0/0:23,0:20:0.47:0,0,1	0/0:26,0:21:0.47:0,0,1	1/1:17,15:32:26.55:175,27,0	1/1:17,8:25:32.83:436,33,0	1/1:20,2:22:11.62:125,12,0	0/0:33,0:33:14.91:0,15,113	1/1:16,6:22:23.88:324,24,0	1/1:15,24:38:75.19:1532,75,0	1/1:12,16:28:29.52:199,30,0	1/1:15,8:23:29.80:339,30,0	0/0:22,0:22:39.11:0,39,1348	0/0:19,0:19:39.11:0,39,1317	1/1:17,11:27:44.67:421,45,0	0/0:19,0:20:35.92:0,36,314	0/0:32,0:32:42.14:0,42,1655	0/1:16,1:17:23.26:146,0,23	1/1:16,2:18:9.03:221,9,0	1/1:23,5:28:17.84:127,18,0	1/1:16,0:16:5.93:40,6,0	1/1:14,7:21:23.78:211,24,0	0/1:9,0:20:0:0,0,0	0/1:11,0:14:0.01:0,0,0	1/1:11,11:22:20.77:140,21,0	1/1:24,5:29:42.04:760,42,0	1/1:14,9:23:38.79:503,39,0	1/1:19,2:20:11.98:145,12,0
chr10	58228482	.	AGTGTGT	A	5020.59	PASS	AB=0.913;AC=40;AF=0.800;AN=50;BaseQRankSum=3.307;DP=703;FS=3.402;HRun=0;HaplotypeScore=201.7465;InbreedingCoeff=0.2756;MQ=42.38;MQ0=30;MQRankSum=-4.648;QD=8.54;ReadPosRankSum=-3.587;VQSLOD=3.4706;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:35:3.22:7,3,0	0/1:18,0:18:0:0,0,0	./.	./.	0/1:33,0:32:9.89:10,0,32	1/1:12,9:19:21.02:344,21,0	1/1:12,4:15:4.87:165,5,0	0/1:38,0:33:0:0,0,0	1/1:9,13:23:17.70:272,18,0	1/1:38,5:43:6.02:490,6,0	1/1:22,5:26:1.67:254,2,0	1/1:16,9:25:14.91:266,15,0	0/0:19,0:21:33.10:0,33,842	0/0:23,0:23:37.36:0,37,987	1/1:15,13:28:21.04:311,21,0	0/1:13,0:27:31.96:32,0,33	0/1:20,0:21:21.83:22,0,44	0/1:14,2:16:53.35:120,0,53	1/1:14,2:15:5.39:169,5,0	1/1:9,15:24:21.07:318,21,0	1/1:24,2:25:2.81:37,3,0	1/1:10,12:22:20.62:279,21,0	1/1:17,7:24:14.48:226,14,0	./.	1/1:15,5:22:3.80:156,4,0	1/1:20,16:36:30.10:827,30,0	1/1:13,15:30:36.01:613,36,0	1/1:5,1:7:8.06:103,8,0
chr10	58228501	.	GTGTGTGTGTGTGTGTGTGTGTA	G	892.89	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=1.361;DP=753;FS=0.945;HRun=0;HaplotypeScore=365.7146;InbreedingCoeff=0.6806;MQ=42.70;MQ0=39;MQRankSum=2.156;QD=16.85;ReadPosRankSum=-0.180;VQSLOD=1.3564;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:46:51.39:0,51,2386	1/1:8,7:15:9.02:198,9,0	0/0:33,0:6:9.03:0,9,251	0/0:38,0:8:18.06:0,18,507	0/0:31,0:29:45.63:0,46,2701	0/0:24,0:21:36.12:0,36,1602	0/0:21,0:19:45.14:0,45,1622	1/1:11,11:18:32.95:473,33,0	0/0:30,0:30:44.99:0,45,1763	0/0:40,0:39:75.26:0,75,3167	0/0:23,0:22:30.57:0,31,1140	0/0:33,0:33:48.59:0,49,1876	0/0:22,0:20:45.15:0,45,3102	0/0:24,0:23:51.65:0,52,3759	0/0:33,0:33:33.10:0,33,1361	0/0:24,0:24:33.11:0,33,1506	0/1:16,0:16:99:345,0,246	0/0:23,0:21:45.15:0,45,1769	0/0:18,0:15:38.67:0,39,1245	0/0:30,0:30:45.15:0,45,1967	0/0:38,0:35:19.19:0,19,1026	0/0:24,0:24:21.07:0,21,972	0/0:23,0:23:18.53:0,19,831	0/0:18,0:18:5.97:0,6,113	0/0:22,0:22:31.29:0,31,1223	0/0:40,0:38:90.31:0,90,4005	0/0:30,0:28:42.14:0,42,1825	0/0:8,0:8:12.04:0,12,475
chr10	58228517	.	GTGTGTA	G	3219.44	PASS	AB=0.989;AC=25;AF=0.446;AN=56;BaseQRankSum=10.884;DP=669;FS=26.019;HRun=0;HaplotypeScore=166.7682;InbreedingCoeff=-0.4034;MQ=47.26;MQ0=31;MQRankSum=-9.144;QD=6.54;ReadPosRankSum=4.501;VQSLOD=1.1822;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:42:55.26:0,55,408	1/1:7,0:7:5.87:35,6,0	0/0:34,0:9:20.12:0,20,214	0/0:43,0:17:43.77:0,44,420	0/1:29,0:28:27.79:28,0,182	0/1:21,0:18:99:204,0,148	0/1:21,0:20:89.59:90,0,264	1/1:15,0:13:26.87:210,27,0	0/1:30,0:30:99:128,0,238	0/1:27,0:26:99:349,0,115	0/1:20,0:20:99:126,0,116	0/1:29,1:30:99:151,0,212	0/0:18,0:16:41.10:0,41,880	0/0:19,0:18:26.41:0,26,1089	0/1:29,0:29:99:176,0,154	0/1:19,1:20:28.77:29,0,108	0/1:11,0:11:52.78:86,0,53	0/1:21,0:18:99:100,0,149	0/1:15,0:14:99:120,0,111	0/1:31,0:30:99:135,0,228	0/1:36,0:34:53.22:53,0,177	0/1:21,0:21:23.64:128,0,24	0/1:22,1:23:92.55:113,0,93	0/0:18,0:18:11.97:0,12,96	0/1:21,1:22:99:108,0,131	0/1:33,0:31:99:548,0,183	0/1:25,1:24:32.68:378,0,33	1/1:4,0:4:8.99:95,9,0
chr10	58229405	.	A	AT	1877.85	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-10.109;DP=681;FS=3.336;HRun=4;HaplotypeScore=65.7861;InbreedingCoeff=0.9956;MQ=86.76;MQ0=0;MQRankSum=-0.606;QD=34.14;ReadPosRankSum=-3.367;VQSLOD=2.8807;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:51.13:0,51,567	1/1:0,8:8:24.08:328,24,0	0/0:33,0:33:89.74:0,90,1001	0/0:17,0:17:42.04:0,42,425	0/0:30,0:30:87.25:0,87,986	0/0:25,0:24:66.17:0,66,737	0/0:23,0:23:66.16:0,66,728	1/1:3,34:37:99:1323,99,0	0/0:17,0:17:51.13:0,51,568	0/0:34,0:34:93.26:0,93,1048	0/0:24,0:24:60.10:0,60,664	0/0:21,0:21:60.17:0,60,681	0/0:28,0:28:81.10:0,81,899	0/0:17,0:17:51.14:0,51,571	0/0:25,0:25:75.20:0,75,841	0/0:21,0:21:63.18:0,63,714	1/1:0,10:10:27.09:369,27,0	0/0:11,0:11:27.04:0,27,293	0/0:26,0:26:72.20:0,72,816	0/0:45,0:45:99:0,126,1421	0/0:11,0:11:33.09:0,33,374	0/0:35,0:35:93.26:0,93,1046	0/0:39,0:39:99:0,105,1179	0/0:26,0:26:75.17:0,75,820	0/0:23,0:23:66.19:0,66,748	0/0:26,0:25:75.16:0,75,826	0/0:43,0:43:99:0,111,1248	0/0:7,0:7:18.05:0,18,204
chr10	58229494	.	T	TA	1690.58	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-8.067;DP=667;FS=6.255;HRun=6;HaplotypeScore=66.6480;InbreedingCoeff=0.9982;MQ=81.95;MQ0=0;MQRankSum=0.185;QD=30.19;ReadPosRankSum=-3.761;VQSLOD=2.6918;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:42.09:0,42,426	1/1:0,13:13:36.12:453,36,0	0/0:20,0:20:56.99:0,57,527	0/0:20,0:20:42.04:0,42,407	0/0:28,0:28:75.10:0,75,745	0/0:30,0:30:72.12:0,72,719	0/0:16,0:16:39.06:0,39,384	1/1:4,31:35:93.24:1117,93,0	0/0:25,0:25:75.15:0,75,756	0/0:46,0:46:99:0,120,1212	0/0:34,0:34:84.14:0,84,845	0/0:15,0:15:42.10:0,42,428	0/0:28,0:28:81.12:0,81,807	0/0:17,0:17:48.10:0,48,483	0/0:25,0:25:66.13:0,66,666	0/0:26,0:26:72.15:0,72,727	1/1:1,7:8:21.07:263,21,0	0/0:15,0:15:42.09:0,42,428	0/0:27,0:27:78.17:0,78,790	0/0:37,0:37:93.13:0,93,927	0/0:20,0:20:54.10:0,54,543	0/0:24,0:24:60.09:0,60,600	0/0:26,0:26:66.11:0,66,657	0/0:16,0:16:33.05:0,33,328	0/0:18,0:18:48.09:0,48,482	0/0:32,0:32:81.13:0,81,802	0/0:39,0:38:99:0,111,1124	0/0:12,0:12:30.05:0,30,298
chr10	58229752	.	G	GGCAAAGGT	2191.81	PASS	AB=0.714;AC=33;AF=0.971;AN=34;BaseQRankSum=-1.337;DP=43;FS=0.000;HRun=0;HaplotypeScore=19.9483;InbreedingCoeff=-0.1629;MQ=122.62;MQ0=0;MQRankSum=-1.238;QD=50.97;ReadPosRankSum=0.347;VQSLOD=2.8704;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	./.	1/1:2,0:4:9.01:280,9,0	0/1:3,1:5:19.14:246,0,19	./.	1/1:1,0:1:3.01:73,3,0	./.	./.	./.	1/1:0,0:1:3.01:141,3,0	1/1:4,0:4:3.01:75,3,0	./.	1/1:1,0:1:3.01:78,3,0	1/1:1,0:1:3:25,3,0	1/1:1,0:1:2.98:21,3,0	1/1:2,0:2:5.98:114,6,0	./.	./.	1/1:3,0:4:6.91:239,7,0	1/1:5,0:5:14.99:171,15,0	1/1:2,0:2:3.01:49,3,0	1/1:3,0:4:8.99:212,9,0	1/1:0,0:1:3.01:119,3,0	./.	1/1:2,0:3:9:213,9,0	1/1:1,0:1:3.01:49,3,0	1/1:3,0:3:9.01:171,9,0	./.
chr10	58232403	.	A	ATT	10089.65	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=19.064;DP=670;FS=1.687;HRun=1;HaplotypeScore=105.2632;InbreedingCoeff=1.0000;MQ=76.10;MQ0=0;MQRankSum=-5.015;QD=45.65;ReadPosRankSum=-0.502;VQSLOD=4.7223;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,123,1979	1/1:0,13:13:39.13:632,39,0	0/0:21,0:21:63.18:0,63,982	0/0:24,0:24:66.03:0,66,991	0/0:21,0:21:63.22:0,63,1025	1/1:5,15:20:58.99:895,59,0	1/1:2,17:19:57.19:870,57,0	1/1:0,28:33:95.10:1467,95,0	0/0:20,0:20:57.18:0,57,907	0/0:29,0:29:87.29:0,87,1379	0/0:24,0:24:69.22:0,69,1100	1/1:1,22:23:66.20:1072,66,0	0/0:18,0:18:51.17:0,51,810	0/0:28,0:28:84.29:0,84,1370	0/0:38,0:38:99:0,114,1856	1/1:0,24:24:72.24:1170,72,0	1/1:4,21:25:69.67:1073,70,0	1/1:1,14:15:45.07:664,45,0	0/0:28,0:28:84.29:0,84,1369	0/0:29,0:29:87.28:0,87,1392	0/0:29,0:29:87.27:0,87,1371	1/1:0,12:12:36.12:578,36,0	1/1:2,16:18:51.64:814,52,0	1/1:0,19:19:54.18:854,54,0	0/0:34,0:34:99:0,102,1640	0/0:23,0:23:69.23:0,69,1104	0/0:23,0:23:69.23:0,69,1104	0/0:17,0:17:51.17:0,51,832
chr10	58232404	.	AC	A	6288.57	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=19.940;DP=669;FS=2.927;HRun=1;HaplotypeScore=104.9066;InbreedingCoeff=1.0000;MQ=75.68;MQ0=0;MQRankSum=-6.455;QD=28.20;ReadPosRankSum=-0.938;VQSLOD=4.4523;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,126,1985	1/1:1,13:14:41.96:407,42,0	0/0:20,0:20:60.20:0,60,939	0/0:24,0:24:70.34:0,70,988	0/0:21,0:21:63.19:0,63,980	1/1:4,15:19:56.91:539,57,0	1/1:3,17:20:59.56:520,60,0	1/1:5,28:33:98.61:905,99,0	0/0:19,0:19:54.18:0,54,860	0/0:29,0:29:87.30:0,87,1389	0/0:24,0:24:69.22:0,69,1081	1/1:2,22:24:68.87:716,69,0	0/0:18,0:18:54.17:0,54,837	0/0:28,0:28:84.29:0,84,1343	0/0:38,0:38:99:0,114,1796	1/1:0,24:24:71.95:716,72,0	1/1:2,21:23:68.87:660,69,0	1/1:2,14:16:44.99:436,45,0	0/0:28,0:28:84.29:0,84,1342	0/0:29,0:29:87.28:0,87,1365	0/0:30,0:30:90.29:0,90,1411	1/1:1,12:13:38.90:376,39,0	1/1:2,16:18:53.79:500,54,0	1/1:0,19:19:53.85:514,54,0	0/0:34,0:34:99:0,102,1628	0/0:22,0:22:66.23:0,66,1054	0/0:22,0:22:66.23:0,66,1054	0/0:17,0:17:51.17:0,51,815
chr10	58232568	.	G	GT	5778.88	PASS	AC=22;AF=0.407;AN=54;BaseQRankSum=15.643;DP=584;FS=1.106;HRun=5;HaplotypeScore=75.1828;InbreedingCoeff=0.9986;MQ=75.56;MQ0=0;MQRankSum=-1.884;QD=28.89;ReadPosRankSum=-0.249;VQSLOD=5.0186;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:87.22:0,87,934	1/1:1,13:14:33.57:408,34,0	0/0:21,0:21:49.30:0,49,473	0/0:16,0:16:23.95:0,24,340	0/0:31,0:31:90.23:0,90,966	1/1:4,11:15:34.46:413,34,0	1/1:3,9:12:25.32:300,25,0	1/1:4,18:22:54.62:652,55,0	0/0:20,0:20:57.12:0,57,603	0/0:26,0:26:75.18:0,75,794	0/0:20,0:20:57.13:0,57,604	1/1:3,13:16:36.07:432,36,0	0/0:17,0:17:48.12:0,48,516	0/0:11,0:11:33.08:0,33,354	0/0:26,0:26:75.16:0,75,789	1/1:3,12:16:27.89:446,28,0	1/1:6,16:22:54.15:655,54,0	1/1:3,12:15:21.10:393,21,0	0/0:20,0:20:57.14:0,57,612	0/0:28,0:27:81.19:0,81,862	0/0:24,0:24:66.16:0,66,709	1/1:1,19:20:51.63:633,52,0	1/1:3,27:30:69.22:852,69,0	1/1:0,18:18:48.15:596,48,0	0/0:35,0:35:96.18:0,96,1005	0/0:30,0:30:72.17:0,72,773	0/0:27,0:27:75.17:0,75,797	./.
chr10	58235326	.	GTCTGTCTGTCTCTC	G	7309.82	PASS	AB=0.958;AC=31;AF=0.554;AN=56;BaseQRankSum=-4.003;DP=812;FS=2.164;HRun=0;HaplotypeScore=302.8560;InbreedingCoeff=0.0802;MQ=49.76;MQ0=30;MQRankSum=-8.267;QD=12.43;ReadPosRankSum=-5.945;VQSLOD=2.2745;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:50:51.89:0,52,3032	1/1:0,12:12:6.49:218,6,0	0/0:23,0:5:8.97:0,9,107	0/0:34,0:6:16.59:0,17,293	0/1:29,0:25:33.72:34,0,1480	1/1:6,19:22:24.08:796,24,0	0/1:4,21:24:64.39:207,0,64	1/1:35,0:32:90.25:1410,90,0	0/1:31,0:30:41.18:41,0,2761	0/1:32,0:30:99:152,0,1970	0/1:30,0:28:79.35:79,0,2265	1/1:4,41:45:47.87:1622,48,0	0/0:27,0:27:81.28:0,81,4483	0/0:26,0:26:78.25:0,78,3774	0/0:27,0:26:0.42:0,0,2570	1/1:2,18:20:21.07:709,21,0	1/1:2,23:24:12.04:385,12,0	1/1:2,17:19:3.01:126,3,0	0/1:29,0:28:78.12:78,0,1560	0/1:27,0:27:65.68:66,0,2255	0/1:61,0:64:99:217,0,5190	1/1:3,24:25:12.98:360,13,0	1/1:1,27:28:6.25:217,6,0	1/1:2,21:23:2.80:126,3,0	0/0:29,0:29:35.21:0,35,2079	0/1:27,0:27:35.53:36,0,2257	0/1:24,0:24:99:216,0,2115	0/1:10,0:10:99:214,0,430
chr10	58235328	.	CTG	C	2246.85	PASS	AB=0.972;AC=23;AF=0.411;AN=56;BaseQRankSum=-5.567;DP=809;FS=10.080;HRun=0;HaplotypeScore=192.0139;InbreedingCoeff=-0.3988;MQ=49.89;MQ0=30;MQRankSum=0.131;QD=3.84;ReadPosRankSum=-5.788;VQSLOD=-0.1095;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:48:99:0,111,1515	0/1:12,0:12:9.98:10,0,10	0/0:23,0:4:9.03:0,9,139	0/0:34,0:6:14.59:0,15,183	0/0:29,0:24:60.19:0,60,867	0/1:25,0:21:12.33:12,0,56	0/1:24,0:23:6.25:6,0,59	0/1:35,0:32:99:166,0,257	0/1:26,4:29:99:262,0,205	0/1:34,1:33:99:296,0,123	0/1:29,1:28:37.10:37,0,263	0/1:42,0:42:25.94:26,0,100	0/0:30,0:30:90.26:0,90,1545	0/0:26,0:26:78.25:0,78,1371	0/1:28,1:28:99:107,0,297	0/1:19,0:19:11.03:11,0,60	0/1:25,0:24:2.69:40,0,3	1/1:18,0:18:2.90:16,3,0	0/1:30,0:29:61.66:62,0,167	0/1:20,6:26:99:295,0,155	0/1:62,2:64:99:423,0,463	0/0:27,0:25:11.18:0,11,59	0/1:27,0:27:7.72:10,0,8	1/1:23,0:23:2.74:16,3,0	0/1:29,0:29:99:114,0,177	0/1:27,1:28:99:191,0,168	0/1:23,2:25:99:186,0,203	0/1:9,0:9:37.69:118,0,38
chr10	58235334	.	GTC	G	3214.43	PASS	AB=1.000;AC=28;AF=0.500;AN=56;BaseQRankSum=7.404;DP=793;FS=0.000;HRun=0;HaplotypeScore=190.9218;InbreedingCoeff=0.6028;MQ=50.60;MQ0=29;MQRankSum=-2.916;QD=7.29;ReadPosRankSum=1.948;VQSLOD=3.0922;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,41:49:78.05:933,78,0	1/1:12,0:12:5.85:50,6,0	0/0:23,0:3:5.97:0,6,61	0/1:24,0:6:15.79:16,0,105	1/1:7,22:24:42.13:500,42,0	1/1:24,0:20:23.74:241,24,0	0/1:25,0:23:9.85:62,0,10	1/1:13,0:36:51.15:596,51,0	0/1:29,0:28:12.09:12,0,636	0/0:31,0:30:28.75:0,29,629	0/0:32,0:30:63.14:0,63,811	1/1:42,0:42:44.48:468,44,0	0/0:29,2:31:12.28:0,12,1026	0/0:25,2:27:36.27:0,36,1011	0/0:31,0:30:44.21:0,44,821	1/1:18,0:18:20.73:205,21,0	1/1:23,1:23:8.69:64,9,0	1/1:17,0:17:2.84:14,3,0	0/0:27,0:26:58.79:0,59,614	0/1:26,0:26:52.78:53,0,444	0/0:62,0:62:54.24:0,54,1434	1/1:27,0:25:11.93:142,12,0	1/1:27,0:27:5.70:50,6,0	1/1:23,0:23:2.68:14,3,0	0/0:30,0:30:36.91:0,37,654	0/0:28,0:28:47.68:0,48,748	0/0:21,0:21:9.41:0,9,562	0/0:9,0:9:10.33:0,10,158
chr10	58237783	.	C	CCTG	14721.51	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=0.364;DP=656;FS=0.991;HRun=0;HaplotypeScore=106.1573;InbreedingCoeff=0.9986;MQ=75.07;MQ0=0;MQRankSum=-7.126;QD=62.12;ReadPosRankSum=2.154;VQSLOD=6.5903;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,123,2217	1/1:0,6:8:18.06:443,18,0	0/0:16,0:16:42.14:0,42,764	0/0:15,0:15:45.07:0,45,706	0/0:23,0:23:66.21:0,66,1198	1/1:1,23:24:69.24:1699,69,0	1/1:1,13:15:36.12:885,36,0	1/1:8,21:31:86.95:2062,87,0	0/0:15,0:15:45.15:0,45,838	0/0:26,0:26:75.25:0,75,1346	0/0:19,0:19:54.19:0,54,998	1/1:2,21:26:63.21:1523,63,0	0/0:30,0:30:90.31:0,90,1656	0/0:25,0:25:75.26:0,75,1398	0/0:27,0:27:81.26:0,81,1479	1/1:2,20:22:60.21:1461,60,0	1/1:1,27:30:69.24:1699,69,0	1/1:0,22:22:63.22:1552,63,0	0/0:29,0:29:87.29:0,87,1555	0/0:28,0:28:81.25:0,81,1407	0/0:41,0:41:99:0,120,2186	1/1:2,10:13:27.09:665,27,0	1/1:2,18:21:54.19:1329,54,0	1/1:2,21:25:57.14:1403,57,0	0/0:20,0:20:60.19:0,60,1080	0/0:25,0:25:75.26:0,75,1390	0/0:27,0:27:78.23:0,78,1389	0/0:10,0:10:30.10:0,30,551
chr10	58238039	.	TC	T	6352.27	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=11.760;DP=614;FS=5.038;HRun=7;HaplotypeScore=62.1446;InbreedingCoeff=0.9671;MQ=77.88;MQ0=0;MQRankSum=-1.283;QD=27.26;ReadPosRankSum=2.134;VQSLOD=5.7696;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:51.16:0,51,641	0/0:14,0:14:39.11:0,39,478	0/0:17,0:17:39.11:0,39,475	0/0:19,0:16:3.08:0,3,273	0/0:20,0:20:55.40:0,55,668	0/0:28,0:28:84.24:0,84,1027	0/0:27,0:27:66.19:0,66,816	0/0:26,0:26:54.09:0,54,616	1/1:0,30:30:84.19:857,84,0	1/1:3,20:23:57.12:581,57,0	1/1:1,12:13:36.08:367,36,0	0/0:23,0:23:60.18:0,60,741	0/0:26,0:26:72.19:0,72,877	0/0:19,0:19:54.16:0,54,666	1/1:1,18:19:51.11:520,51,0	0/0:29,0:29:72.23:0,72,906	0/0:25,0:25:72.22:0,72,893	0/0:16,0:16:42.13:0,42,528	1/1:1,16:17:48.08:478,48,0	1/1:2,27:29:81.18:826,81,0	1/1:2,25:27:66.15:673,66,0	0/0:22,0:22:63.20:0,63,792	0/0:23,0:23:63.18:0,63,777	0/0:24,0:24:72.23:0,72,905	1/1:0,24:24:69.16:704,69,0	1/1:2,26:28:72.16:735,72,0	1/1:1,19:20:51.12:520,51,0	1/1:0,3:3:9.02:92,9,0
chr10	58239028	.	GAC	G	1563.53	PASS	AB=0.883;AC=30;AF=0.536;AN=56;BaseQRankSum=7.216;DP=673;FS=7.953;HRun=0;HaplotypeScore=328.2663;InbreedingCoeff=0.4641;MQ=52.97;MQ0=6;MQRankSum=-6.040;QD=4.07;ReadPosRankSum=-1.022;VQSLOD=1.3528;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,105,1980	0/0:6,1:7:1.95:0,2,6	0/0:44,0:26:59.53:0,60,926	0/0:42,0:22:40.79:0,41,789	0/0:35,0:35:78.26:0,78,1499	0/0:23,1:24:6.86:0,7,29	0/0:15,0:13:7.36:0,7,59	1/1:13,0:12:28.81:205,29,0	1/1:13,11:29:28.92:190,29,0	1/1:19,12:33:16.80:407,17,0	0/1:9,6:16:0.95:7,0,1	1/1:21,2:23:8.73:83,9,0	0/0:30,1:31:18.67:0,19,861	0/0:29,0:29:50.08:0,50,1077	1/1:14,9:28:3.65:35,4,0	0/1:28,1:29:11.45:54,0,11	1/1:2,0:11:8.73:49,9,0	0/1:9,0:9:3.77:4,0,25	1/1:11,4:13:5.94:128,6,0	1/1:23,2:28:0.41:45,0,0	0/1:10,1:12:0:1,0,0	0/0:22,0:21:0.04:0,0,1	0/1:32,0:32:9.92:20,0,10	1/1:19,0:19:0.38:0,0,0	1/1:14,9:29:14.34:79,14,0	1/1:14,6:20:0.78:234,1,0	1/1:17,7:27:15.14:164,15,0	0/1:5,0:7:32.40:32,0,40
chr10	58239030	.	C	CAG	1819.34	PASS	AB=0.992;AC=34;AF=0.607;AN=56;BaseQRankSum=9.535;DP=684;FS=25.664;HRun=0;HaplotypeScore=350.7174;InbreedingCoeff=0.5170;MQ=49.22;MQ0=6;MQRankSum=-8.632;QD=4.53;ReadPosRankSum=-2.799;VQSLOD=1.1544;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,102,1351	1/1:7,1:8:1.36:6,1,0	0/0:41,0:23:38.93:0,39,624	0/0:40,0:20:30.93:0,31,519	0/0:36,0:36:81.16:0,81,1106	0/1:25,0:25:12.89:13,0,45	0/1:15,0:13:13.42:39,0,13	1/1:11,1:12:15.47:185,15,0	1/1:30,0:30:23.74:98,24,0	1/1:34,0:33:62.32:560,62,0	1/1:18,0:18:10.61:50,11,0	1/1:22,1:23:4.03:47,4,0	0/0:30,1:31:8.70:0,9,556	0/0:31,0:31:62.59:0,63,785	1/1:28,0:28:12.66:44,13,0	0/0:29,0:29:1.84:0,2,37	1/1:12,0:11:6.86:58,7,0	0/0:9,0:9:8.34:0,8,32	1/1:15,0:13:21.97:141,22,0	1/1:29,0:29:18.72:82,19,0	1/1:12,0:12:3:25,3,0	0/0:24,0:24:0.46:0,0,1	0/1:31,0:32:10.75:19,0,11	1/1:19,0:19:2.87:25,3,0	1/1:31,0:31:17.15:82,17,0	1/1:25,0:23:46.98:290,47,0	1/1:26,0:26:32.56:201,33,0	0/1:8,0:8:24.27:42,0,24
chr10	58239034	.	CAAAG	C	1343.04	PASS	AB=0.854;AC=22;AF=0.393;AN=56;BaseQRankSum=4.621;DP=664;FS=1.032;HRun=0;HaplotypeScore=354.0892;InbreedingCoeff=-0.1148;MQ=45.08;MQ0=8;MQRankSum=-5.734;QD=3.48;ReadPosRankSum=-1.377;VQSLOD=1.3864;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,108,1689	1/1:6,1:8:6.76:38,7,0	0/0:38,0:20:42:0,42,947	0/0:38,0:17:32.24:0,32,815	0/0:38,0:38:86:0,86,2006	0/1:22,0:23:7.70:8,0,16	0/1:15,0:13:6.03:6,0,83	0/1:12,1:12:99:101,0,131	0/1:21,5:27:31.93:32,0,130	0/1:26,8:32:99:421,0,176	1/1:11,6:18:2.33:35,2,0	1/1:18,1:22:6.42:82,6,0	0/1:29,2:31:3.48:3,0,990	0/0:30,1:31:42.08:0,42,1073	0/1:22,5:28:8.72:9,0,70	0/1:20,2:28:55.31:55,0,97	1/1:12,0:11:6.34:36,6,0	0/0:7,0:7:10.12:0,10,83	0/1:14,0:13:1.48:1,0,85	0/1:16,9:25:17.47:26,0,17	0/0:9,0:9:0:0,0,0	0/0:22,1:26:5.08:0,5,15	0/0:27,0:32:1.82:0,2,20	0/0:16,0:18:0.77:0,1,2	0/1:23,7:30:19.12:19,0,82	0/1:20,4:22:64.31:324,0,64	0/1:17,6:25:73.19:227,0,73	0/1:6,2:8:13.60:74,0,14
chr10	58239036	.	A	AAG	1572.83	PASS	AB=0.981;AC=27;AF=0.500;AN=54;BaseQRankSum=8.573;DP=696;FS=2.357;HRun=0;HaplotypeScore=378.6256;InbreedingCoeff=0.2616;MQ=42.60;MQ0=8;MQRankSum=-7.496;QD=3.94;ReadPosRankSum=-1.102;VQSLOD=1.3716;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:42.06:0,42,553	1/1:10,0:10:8.77:60,9,0	0/1:35,0:18:22.62:23,0,339	0/0:37,0:16:35.82:0,36,412	0/0:38,0:38:69.11:0,69,898	0/0:24,0:24:4.12:0,4,30	0/1:15,0:13:17.27:19,0,17	0/1:21,0:20:73.96:76,0,74	1/1:28,2:30:29.58:157,30,0	0/1:38,1:37:8.24:425,0,8	1/1:18,2:20:1.90:25,2,0	1/1:24,0:24:3.12:21,3,0	0/0:32,0:32:41.84:0,42,474	0/0:30,0:30:40.99:0,41,437	1/1:29,0:29:8.18:47,8,0	0/1:28,0:28:19.21:19,0,21	1/1:13,0:12:6.79:54,7,0	0/0:7,0:7:7.65:0,8,30	0/1:13,0:11:35.86:92,0,36	1/1:26,2:28:3.88:65,4,0	./.	0/0:31,0:30:0.64:0,1,3	0/0:34,0:34:2.91:0,3,18	0/0:16,0:16:0:0,0,0	1/1:31,2:33:15.49:95,15,0	1/1:26,1:25:8.94:312,9,0	1/1:25,0:25:8.77:166,9,0	0/1:7,1:8:20.98:89,0,21
chr10	58239038	.	G	GAC	1056.89	PASS	AB=0.976;AC=16;AF=0.296;AN=54;BaseQRankSum=5.873;DP=743;FS=0.000;HRun=0;HaplotypeScore=416.1900;InbreedingCoeff=-0.0315;MQ=41.84;MQ0=9;MQRankSum=-4.915;QD=2.96;ReadPosRankSum=-3.084;VQSLOD=0.7718;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:54.02:0,54,734	0/1:11,0:11:5.08:70,0,5	0/0:37,0:18:7.72:0,8,486	0/0:38,0:16:33.56:0,34,480	0/0:41,0:41:75.69:0,76,1098	0/0:24,0:24:8.91:0,9,68	0/0:18,0:16:10.56:0,11,98	0/0:24,0:23:15.97:0,16,284	0/1:31,0:31:46.65:67,0,47	0/1:42,0:40:99:233,0,141	1/1:21,0:21:11.05:67,11,0	0/1:26,0:26:14.75:37,0,15	0/0:32,0:32:36.08:0,36,611	0/0:30,0:30:44.47:0,44,564	0/1:31,1:32:29.29:29,0,50	0/1:28,0:28:0.81:1,0,98	0/1:14,0:13:11.71:12,0,12	0/0:8,0:7:14.86:0,15,124	0/1:12,1:11:39.91:40,0,73	1/1:32,0:33:11.57:76,12,0	./.	0/0:31,0:30:0.63:0,1,3	0/0:35,0:35:3.47:0,3,42	0/0:17,0:17:0:0,0,0	0/1:37,0:37:46.79:47,0,47	0/1:28,3:29:53.16:260,0,53	0/1:25,2:28:6.07:199,0,6	0/1:10,0:10:73.09:73,0,87
chr10	58239039	.	A	AGACT	1260.32	PASS	AB=0.970;AC=19;AF=0.339;AN=56;BaseQRankSum=5.086;DP=786;FS=5.750;HRun=0;HaplotypeScore=457.8242;InbreedingCoeff=-0.2644;MQ=41.11;MQ0=10;MQRankSum=-5.703;QD=2.57;ReadPosRankSum=-6.288;VQSLOD=-0.1308;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:42.06:0,42,814	0/1:11,0:12:27.09:97,0,27	0/0:38,0:18:22.99:0,23,591	0/0:39,0:16:28.22:0,28,600	0/0:43,0:43:71.93:0,72,1342	0/0:23,2:25:8.34:0,8,58	0/0:16,1:15:20.45:0,20,194	0/1:27,0:26:95.70:96,0,394	0/1:32,0:32:74.98:75,0,244	0/1:48,0:46:99:316,0,582	1/1:21,0:23:9.15:64,9,0	0/1:23,6:29:14.24:63,0,14	0/1:33,0:33:3.63:4,0,730	0/0:32,0:32:42.82:0,43,704	0/1:30,0:32:29.86:30,0,114	0/1:26,4:30:18.02:18,0,195	0/1:14,0:13:7.90:8,0,40	0/0:8,0:7:13.58:0,14,169	0/1:13,0:11:33.50:33,0,237	0/1:34,0:34:30.66:60,0,31	0/0:9,0:9:0.88:0,1,2	0/1:33,2:34:0.80:1,0,1	0/0:33,7:40:2.15:0,2,54	0/1:17,0:17:0.02:0,0,0	0/1:39,0:40:50.09:50,0,146	0/1:32,0:30:99:231,0,265	0/1:29,0:29:99:172,0,161	0/1:11,0:11:92.04:92,0,123
chr10	58239042	.	GAC	G	1320.86	PASS	AB=0.992;AC=23;AF=0.411;AN=56;BaseQRankSum=8.450;DP=810;FS=0.957;HRun=0;HaplotypeScore=442.9291;InbreedingCoeff=-0.2870;MQ=40.18;MQ0=11;MQRankSum=-4.979;QD=2.36;ReadPosRankSum=1.890;VQSLOD=0.2274;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:41.90:0,42,732	0/1:11,1:12:31.46:33,0,31	0/0:40,0:18:3.93:0,4,420	0/0:46,0:18:32.58:0,33,500	0/0:43,0:43:69.22:0,69,1288	0/1:26,1:26:7.81:35,0,8	0/1:18,0:16:1.84:2,0,40	0/1:29,0:29:52.47:52,0,359	0/1:33,0:33:81.73:100,0,82	0/1:48,1:47:63.52:381,0,64	0/1:23,0:23:2.91:3,0,22	1/1:27,2:29:18.75:136,19,0	0/1:33,1:34:24.98:25,0,647	0/0:31,0:31:28.10:0,28,569	0/1:33,0:33:19.22:19,0,26	0/1:29,0:29:13.77:66,0,14	1/1:12,1:12:6.40:51,6,0	0/1:8,0:7:0.64:1,0,67	0/1:13,0:11:33.83:112,0,34	0/1:36,0:36:42.30:48,0,42	0/0:9,0:9:2.04:0,2,6	0/1:37,0:36:0.22:0,0,1	0/0:42,0:42:3.15:0,3,22	0/1:17,0:17:0:0,0,0	0/1:42,0:42:46.36:46,0,65	0/1:34,0:31:99:180,0,116	0/1:31,0:31:25.53:133,0,26	0/1:11,0:11:46.35:46,0,52
chr10	58239044	.	CAG	C	386.39	PASS	AB=0.981;AC=17;AF=0.304;AN=56;BaseQRankSum=4.239;DP=850;FS=0.000;HRun=0;HaplotypeScore=468.8666;InbreedingCoeff=-0.0335;MQ=37.48;MQ0=12;MQRankSum=-3.769;QD=0.94;ReadPosRankSum=-0.427;VQSLOD=0.1946;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:38:39.08:0,39,661	0/0:11,1:13:6.47:0,6,64	0/0:42,0:18:25.18:0,25,379	0/0:49,1:17:18.23:0,18,325	0/0:43,0:43:66.23:0,66,1130	0/1:27,0:26:0.73:1,0,7	0/1:17,0:15:3.99:23,0,4	0/1:28,4:31:85.74:86,0,485	0/0:34,0:34:11.11:0,11,127	0/1:56,1:55:72.71:73,0,281	0/1:25,0:25:5.56:6,0,20	1/1:28,1:29:9.56:66,10,0	0/0:35,0:35:22.50:0,23,667	0/0:31,0:31:19.66:0,20,461	0/0:33,0:34:17.06:0,17,59	1/1:27,1:30:1.41:90,1,0	0/1:13,0:12:8.87:11,0,9	0/1:9,0:8:28.32:43,0,28	0/1:14,1:13:38.85:48,0,39	0/1:37,0:37:26.16:26,0,74	0/0:8,0:8:2.51:0,3,7	0/1:38,1:38:0.60:1,0,1	0/0:43,0:43:0.17:0,0,1	0/0:18,0:18:0:0,0,0	0/0:43,0:43:23.13:0,23,115	0/1:38,0:35:14.68:15,0,268	0/1:32,1:33:23.84:24,0,66	0/1:12,0:12:21.58:22,0,61
chr10	58239046	.	G	GAC	709.97	PASS	AB=0.902;AC=18;AF=0.321;AN=56;BaseQRankSum=6.157;DP=885;FS=8.631;HRun=0;HaplotypeScore=493.0866;InbreedingCoeff=0.1906;MQ=37.03;MQ0=14;MQRankSum=-4.625;QD=1.81;ReadPosRankSum=-2.217;VQSLOD=-0.2160;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:39.13:0,39,597	0/0:15,0:15:14.67:0,15,103	0/0:46,0:17:37.40:0,37,418	0/0:55,0:19:23.42:0,23,377	0/0:47,0:47:66.22:0,66,1008	1/1:16,14:29:2.46:33,2,0	1/1:15,3:16:6.15:202,6,0	0/0:35,0:32:57.47:0,57,639	0/0:34,0:34:25.36:0,25,111	0/1:58,0:55:72.52:73,0,494	0/0:25,0:25:4.18:0,4,13	0/1:25,3:28:3.42:73,0,3	0/0:35,0:35:52.58:0,53,641	0/0:31,0:31:35.28:0,35,449	0/0:35,0:35:11.87:0,12,45	0/1:20,10:30:13.57:202,0,14	0/1:13,0:12:13.10:38,0,13	0/1:7,3:9:2.96:154,0,3	0/0:16,0:14:11.32:0,11,134	0/1:40,0:40:14.77:15,0,63	0/1:8,0:8:0:1,0,0	1/1:38,4:41:2.30:16,2,0	1/1:38,6:44:0.29:4,0,0	0/1:8,9:17:0:0,0,0	0/0:43,0:43:19.88:0,20,99	0/1:39,0:36:29.46:29,0,396	0/0:34,0:34:9.05:0,9,127	0/1:15,0:16:19.63:20,0,69
chr10	58239052	.	GAC	G	844.66	PASS	AB=0.980;AC=20;AF=0.357;AN=56;BaseQRankSum=7.424;DP=922;FS=0.418;HRun=0;HaplotypeScore=503.4818;InbreedingCoeff=-0.3948;MQ=34.96;MQ0=13;MQRankSum=-5.457;QD=1.46;ReadPosRankSum=1.710;VQSLOD=0.2539;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:41.31:0,41,767	0/1:15,0:15:47:47,0,82	0/0:45,0:12:24.96:0,25,366	0/0:65,0:18:23.80:0,24,326	0/0:46,0:46:66.20:0,66,1200	0/1:30,0:29:2.47:2,0,21	0/0:17,0:16:0.90:0,1,44	0/1:40,1:37:99:121,0,510	0/1:34,1:35:11.43:11,0,172	0/1:57,3:57:99:308,0,589	0/1:27,0:27:14.97:15,0,57	0/1:28,0:28:10.93:55,0,11	0/1:40,0:40:5.93:6,0,673	0/0:34,0:34:19.30:0,19,513	0/0:33,2:35:8.04:0,8,67	0/1:29,0:29:41.83:42,0,55	0/1:12,0:11:34.84:35,0,35	0/1:9,0:8:8.76:9,0,61	0/1:17,1:16:99:123,0,112	0/1:40,2:41:38.74:39,0,127	0/0:9,1:10:2.51:0,3,7	1/1:43,1:43:0.59:2,1,0	0/0:44,0:44:3.54:0,4,18	0/1:15,0:15:0:0,0,0	0/1:41,3:44:3.99:4,0,132	0/1:38,2:37:86.63:87,0,433	0/1:34,0:34:44.32:44,0,118	0/1:15,1:16:37.76:38,0,127
chr10	58239058	.	G	GAC	2076.31	PASS	AB=0.916;AC=17;AF=0.304;AN=56;BaseQRankSum=6.913;DP=1021;FS=8.539;HRun=0;HaplotypeScore=545.1098;InbreedingCoeff=-0.3581;MQ=33.92;MQ0=17;MQRankSum=-1.432;QD=3.58;ReadPosRankSum=3.711;VQSLOD=-0.6201;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:41.95:0,42,640	0/1:18,0:18:12.69:13,0,140	0/0:58,0:11:23.13:0,23,299	0/0:74,0:16:34.02:0,34,366	0/0:50,0:50:63.67:0,64,928	0/1:31,0:30:22.47:22,0,27	0/0:17,0:17:12.65:0,13,98	0/1:49,0:44:0.16:0,0,747	0/1:21,16:37:99:248,0,200	0/1:50,16:63:99:678,0,718	0/0:21,7:28:7.18:0,7,132	0/1:28,0:28:48.86:91,0,49	0/1:40,0:40:46.68:47,0,495	0/0:35,0:35:32.34:0,32,434	0/1:28,11:39:71.61:72,0,107	0/1:30,0:30:1.53:2,0,153	0/1:12,0:11:7.32:7,0,64	0/0:10,0:9:10.95:0,11,71	0/1:20,4:21:99:231,0,206	0/1:42,4:45:99:110,0,189	0/0:11,2:12:0.36:0,0,1	0/0:51,0:49:3.88:0,4,21	0/0:51,0:51:4.71:0,5,49	0/1:16,0:16:0:0,0,0	0/1:31,13:45:99:156,0,147	0/1:39,5:42:99:386,0,441	0/1:29,5:34:99:129,0,309	0/1:20,0:20:28.82:29,0,189
chr10	58239062	.	GAC	G	168.19	PASS	AB=0.985;AC=13;AF=0.232;AN=56;BaseQRankSum=7.227;DP=1066;FS=4.411;HRun=0;HaplotypeScore=560.3825;InbreedingCoeff=-0.0327;MQ=35.25;MQ0=20;MQRankSum=-2.202;QD=0.45;ReadPosRankSum=-3.036;VQSLOD=-0.3730;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:53,2:55:41.28:0,41,703	0/1:21,0:21:8.66:9,0,235	0/0:65,0:12:24.86:0,25,306	0/0:85,0:18:24.28:0,24,402	0/0:53,0:53:60.07:0,60,1030	1/1:28,1:28:5.06:53,5,0	0/1:21,0:20:26.19:26,0,35	0/1:48,0:43:12.88:13,0,987	0/0:38,1:39:50.06:0,50,512	0/0:70,0:67:65.73:0,66,1594	0/1:29,0:29:21.15:21,0,127	0/1:27,2:29:39.01:64,0,39	0/1:39,4:43:30.41:30,0,656	0/0:34,3:37:9.26:0,9,474	0/0:39,0:39:26.43:0,26,238	0/1:30,0:30:23.49:23,0,95	0/1:12,0:11:44.68:45,0,93	0/0:10,0:9:6.77:0,7,62	0/0:25,0:22:53.51:0,54,540	0/1:44,0:43:23.48:23,0,242	0/0:12,1:12:1.16:0,1,5	0/1:52,1:51:0.84:1,0,1	0/0:49,1:50:3.65:0,4,51	0/1:17,0:17:0:0,0,0	0/0:46,0:46:14.64:0,15,324	0/0:47,0:44:54.01:0,54,975	0/0:33,0:33:15.02:0,15,590	0/0:22,0:22:16.21:0,16,346
chr10	58239080	.	C	CACAG	5396.31	PASS	AB=0.940;AC=22;AF=0.393;AN=56;BaseQRankSum=1.194;DP=1205;FS=20.209;HRun=0;HaplotypeScore=606.8391;InbreedingCoeff=-0.4057;MQ=32.36;MQ0=49;MQRankSum=-0.418;QD=7.41;ReadPosRankSum=-1.130;VQSLOD=0.0334;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:51:17.15:0,17,397	0/1:17,3:20:99:481,0,147	0/0:105,0:12:14.79:0,15,239	0/0:120,0:20:38.59:0,39,521	0/0:58,0:57:22.95:0,23,406	0/1:29,0:28:19.02:110,0,19	0/1:25,0:23:43.31:43,0,69	0/1:43,4:46:99:498,0,382	0/1:31,2:33:99:377,0,331	0/1:76,7:81:99:695,0,1855	0/1:35,2:37:99:183,0,163	0/1:32,0:31:22.28:22,0,91	0/1:45,0:44:47.54:48,0,779	0/0:37,0:37:13.08:0,13,325	0/1:32,4:36:99:375,0,108	0/0:31,0:31:23.10:0,23,218	0/1:10,2:12:25.28:111,0,25	0/0:12,0:11:9.79:0,10,62	0/1:25,0:24:57.42:57,0,400	0/1:45,4:48:99:779,0,233	1/1:14,0:13:1.63:4,2,0	1/1:61,0:60:2.35:9,2,0	0/0:58,0:58:1.82:0,2,58	0/1:18,0:18:0.16:1,0,0	0/1:41,4:45:99:440,0,210	0/1:49,5:51:99:619,0,1103	0/1:32,3:35:99:330,0,619	0/1:23,0:23:99:215,0,363
chr10	58239090	.	CTG	C	169.58	PASS	AB=0.939;AC=12;AF=0.214;AN=56;BaseQRankSum=4.607;DP=1199;FS=21.675;HRun=0;HaplotypeScore=581.3230;InbreedingCoeff=0.0499;MQ=34.16;MQ0=56;MQRankSum=-1.350;QD=0.55;ReadPosRankSum=2.078;VQSLOD=-0.5540;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:43:17.36:0,17,320	0/0:21,0:20:6.14:0,6,305	0/0:125,0:16:31.56:0,32,403	0/0:147,0:24:22.63:0,23,411	0/0:57,0:56:18.40:0,18,316	0/1:27,4:29:1.47:1,0,58	0/1:28,0:25:4.40:4,0,71	0/0:28,0:26:27.02:0,27,727	0/0:32,0:32:53.03:0,53,782	0/0:80,0:79:11.21:0,11,2327	0/0:35,0:35:30.88:0,31,303	0/0:28,3:30:13.06:0,13,200	0/1:46,0:45:18.05:18,0,529	0/0:35,0:35:8.56:0,9,221	0/0:35,0:35:47.42:0,47,452	0/1:26,5:30:95.16:95,0,110	0/1:10,0:10:14.79:15,0,123	1/1:7,3:9:6.99:92,7,0	0/0:16,0:15:2.57:0,3,343	0/0:49,0:47:70.89:0,71,687	0/0:14,0:13:2.03:0,2,28	1/1:59,3:61:0.87:4,1,0	0/0:58,1:59:2.28:0,2,36	0/1:11,4:16:0.08:0,0,0	0/0:44,0:44:69.47:0,69,630	0/1:53,0:50:48.22:48,0,973	0/0:36,0:36:1.03:0,1,629	0/1:23,0:23:19.66:20,0,457
chr10	58239108	.	GAGAGAGAC	G	455.60	PASS	AB=0.996;AC=15;AF=0.268;AN=56;BaseQRankSum=2.248;DP=1062;FS=11.276;HRun=0;HaplotypeScore=544.9607;InbreedingCoeff=0.0618;MQ=30.13;MQ0=59;MQRankSum=0.512;QD=0.92;ReadPosRankSum=1.632;VQSLOD=-0.0563;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:50,0:48:9.14:9,0,53	0/0:22,0:19:20.10:0,20,257	0/0:71,0:10:10.86:0,11,269	0/0:90,0:14:14.92:0,15,263	0/0:45,0:62:0.94:0,1,5	0/1:28,1:26:18.43:33,0,18	1/1:26,0:23:7.81:81,8,0	0/0:22,0:17:33.85:0,34,300	0/1:29,0:29:7.56:8,0,334	0/1:73,0:72:99:112,0,1574	0/0:34,0:33:17.23:0,17,201	0/0:28,1:28:8.84:0,9,46	0/1:49,0:46:99:166,0,454	0/0:31,0:31:6.54:0,7,34	0/0:31,0:31:14.66:0,15,148	0/0:25,0:23:4.78:0,5,16	0/0:13,0:11:8.72:0,9,85	0/0:8,0:6:5.05:0,5,43	0/0:19,0:13:12.16:0,12,279	0/0:52,0:49:10.97:0,11,313	0/0:14,0:12:4.46:0,4,17	1/1:54,11:63:3.73:39,4,0	1/1:54,5:57:0.92:13,1,0	0/1:15,0:15:0.02:1,0,0	0/0:43,0:42:26.87:0,27,229	0/1:45,0:41:99:100,0,703	0/1:30,0:30:25.85:26,0,380	0/1:24,0:21:13.52:14,0,360
chr10	58239114	.	GACACACAC	G	1044.92	PASS	AB=0.993;AC=25;AF=0.446;AN=56;BaseQRankSum=4.126;DP=967;FS=11.471;HRun=0;HaplotypeScore=485.5543;InbreedingCoeff=-0.2461;MQ=30.59;MQ0=47;MQRankSum=1.413;QD=1.82;ReadPosRankSum=-1.002;VQSLOD=0.1386;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:47:3.12:0,3,234	0/1:21,0:18:32.65:33,0,60	0/0:48,0:7:11.98:0,12,177	0/0:67,0:9:5.76:0,6,194	0/0:60,3:62:0.94:0,1,5	0/1:26,0:23:28.02:28,0,135	0/0:24,0:21:6.05:0,6,65	0/0:19,0:13:11.42:0,11,183	0/1:24,0:24:54.36:133,0,54	0/1:70,0:69:99:350,0,816	0/1:33,0:32:3.84:4,0,11	1/1:27,1:26:11:65,11,0	0/1:40,1:38:60.99:61,0,982	0/1:30,1:32:29.82:30,0,91	1/1:29,0:29:4.48:13,4,0	1/1:22,0:20:2.42:8,2,0	0/1:13,0:11:34.33:37,0,34	0/1:10,0:8:7.15:7,0,92	0/1:20,0:14:6.18:6,0,359	0/1:46,0:44:31.49:31,0,53	1/1:15,0:12:1.87:5,2,0	0/0:65,2:65:12.51:0,13,148	0/0:47,5:50:2.27:0,2,33	1/1:13,0:13:2.16:7,2,0	0/1:38,0:37:8.02:21,0,8	0/1:45,0:41:99:197,0,754	0/1:25,0:25:52.47:52,0,85	0/1:23,0:20:99:109,0,175
chr10	58239124	.	C	CAG	599.10	PASS	AB=1.000;AC=40;AF=0.769;AN=52;BaseQRankSum=-1.994;DP=855;FS=0.000;HRun=0;HaplotypeScore=404.4591;InbreedingCoeff=0.3009;MQ=31.75;MQ0=33;MQRankSum=-0.811;QD=0.85;ReadPosRankSum=2.450;VQSLOD=0.8377;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:38,14:55:1.52:4,2,0	0/0:18,0:16:2.63:0,3,13	./.	./.	1/1:64,0:64:0.47:2,0,0	0/1:23,0:20:0.22:0,0,14	0/1:26,0:24:0:0,0,0	0/1:15,0:9:0:0,0,0	1/1:21,0:21:3.43:20,3,0	1/1:59,0:58:20.18:110,20,0	0/1:28,0:27:1.86:2,0,9	1/1:20,0:18:0.47:1,0,0	1/1:41,0:38:6.77:71,7,0	1/1:28,0:28:1.12:33,1,0	0/0:29,0:29:0.81:0,1,2	0/1:17,0:15:0:0,0,0	1/1:18,0:15:6.64:24,7,0	1/1:8,0:6:2.97:20,3,0	1/1:21,0:16:0.20:50,0,0	0/0:45,0:42:2.49:0,2,14	1/1:25,0:23:2.22:7,2,0	1/1:63,0:61:3.29:33,3,0	1/1:41,0:39:0.57:20,1,0	0/1:12,0:11:0:0,0,0	1/1:33,0:32:7.11:43,7,0	1/1:42,0:38:27.53:194,28,0	1/1:22,0:22:10.03:56,10,0	1/1:22,0:19:2.74:12,3,0
chr10	58239130	.	G	GAGAGAC	2464.98	PASS	AB=0.998;AC=27;AF=0.482;AN=56;BaseQRankSum=0.971;DP=802;FS=0.000;HRun=0;HaplotypeScore=380.0394;InbreedingCoeff=0.1085;MQ=30.69;MQ0=30;MQRankSum=1.197;QD=4.28;ReadPosRankSum=3.976;VQSLOD=1.1285;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:55,0:53:14.32:88,14,0	0/0:20,0:17:2.74:0,3,66	0/0:6,0:3:5.87:0,6,36	0/0:23,0:6:5.98:0,6,47	0/0:58,0:57:1.16:0,1,22	0/1:24,0:20:34.03:34,0,76	0/1:25,0:23:6.03:27,0,6	0/0:20,0:14:18.57:0,19,201	1/1:20,0:20:7.56:82,8,0	1/1:50,2:51:3.05:842,3,0	0/0:21,1:21:0.17:0,0,1	0/0:19,0:17:0.86:0,1,3	0/1:42,0:39:88.69:89,0,141	0/1:26,0:26:0.38:1,0,0	0/0:28,0:28:0.72:0,1,5	1/1:15,0:13:1.91:6,2,0	0/0:20,0:17:14.95:0,15,92	0/0:8,0:6:1.02:0,1,15	0/1:22,0:17:33.74:283,0,34	0/1:43,0:41:3.97:73,0,4	0/1:27,0:25:6.82:23,0,7	1/1:62,0:60:11.30:56,11,0	1/1:40,0:38:3:14,3,0	1/1:12,0:11:2.22:7,2,0	1/1:27,1:27:1.47:57,1,0	0/1:38,0:34:14.71:523,0,15	1/1:21,0:21:16.35:224,16,0	0/1:23,0:20:23.21:184,0,23
chr10	58239135	.	A	ACT	509.35	PASS	AB=0.982;AC=13;AF=0.232;AN=56;BaseQRankSum=5.384;DP=750;FS=29.203;HRun=0;HaplotypeScore=307.3822;InbreedingCoeff=-0.1654;MQ=30.15;MQ0=29;MQRankSum=-0.229;QD=1.28;ReadPosRankSum=0.253;VQSLOD=1.3463;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:51,4:53:45.49:129,0,45	0/0:19,0:16:21.98:0,22,218	0/0:3,0:3:6.01:0,6,68	0/0:16,0:4:9.03:0,9,133	0/0:50,7:56:11.40:0,11,139	0/1:23,1:21:66.90:87,0,67	0/1:24,0:23:43.83:54,0,44	0/0:20,0:14:42.14:0,42,572	0/0:18,0:18:5.58:0,6,57	0/1:47,0:46:7.77:8,0,357	0/1:19,0:18:2.80:3,0,9	0/0:17,0:15:2.84:0,3,10	0/1:37,3:37:99:164,0,307	0/0:21,3:25:1.07:0,1,4	0/0:27,0:27:1.37:0,1,4	0/0:17,0:15:6.43:0,6,47	0/0:18,0:15:18.41:0,18,169	0/0:8,0:6:5.98:0,6,60	0/0:20,0:15:14.42:0,14,290	0/1:41,0:38:25.12:25,0,44	0/0:29,0:27:2.51:0,3,7	0/1:54,1:53:38:80,0,38	1/1:34,2:34:0:28,0,0	0/1:12,0:11:4.76:5,0,41	0/1:25,0:24:13.24:49,0,13	0/0:34,0:30:19.18:0,19,380	0/0:22,0:22:19.24:0,19,159	0/1:21,0:18:13.73:14,0,119
chr10	58239139	.	A	ACC	99.67	PASS	AB=0.969;AC=9;AF=0.161;AN=56;BaseQRankSum=4.893;DP=733;FS=12.854;HRun=0;HaplotypeScore=297.8148;InbreedingCoeff=0.0411;MQ=29.15;MQ0=25;MQRankSum=-0.653;QD=0.39;ReadPosRankSum=-3.005;VQSLOD=0.7624;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:49,4:51:3.37:3,0,73	0/0:18,0:15:17.38:0,17,187	0/0:4,0:1:3:0,3,29	0/0:10,0:3:9.03:0,9,128	0/0:48,6:53:11.43:0,11,181	0/1:25,0:22:68.55:69,0,116	0/1:24,0:23:36.02:36,0,60	0/0:21,0:15:45.14:0,45,607	0/0:18,0:18:17.45:0,17,163	0/0:43,0:42:99:0,110,1213	0/1:20,0:19:2.73:3,0,9	0/0:17,0:15:6.62:0,7,45	0/0:38,3:38:2.28:0,2,289	0/1:19,4:23:3.29:5,0,3	0/0:28,0:28:4.87:0,5,50	0/0:18,0:16:12.25:0,12,179	0/0:18,0:15:23.41:0,23,222	0/0:7,0:6:8.92:0,9,82	0/0:20,0:16:39.30:0,39,414	0/0:41,0:38:11.91:0,12,163	0/0:30,0:28:3.48:0,3,44	0/1:52,0:51:6.50:79,0,7	1/1:33,2:33:1.45:16,1,0	0/0:12,0:11:4.26:0,4,49	0/1:24,0:23:6.39:6,0,20	0/0:34,0:30:77.70:0,78,820	0/0:22,0:22:36.38:0,36,361	0/0:21,0:18:30.83:0,31,393
chr10	58239147	.	A	ACT	338.10	PASS	AB=0.960;AC=8;AF=0.148;AN=54;BaseQRankSum=7.868;DP=672;FS=31.635;HRun=0;HaplotypeScore=243.4478;InbreedingCoeff=-0.0778;MQ=30.75;MQ0=25;MQRankSum=-3.052;QD=1.91;ReadPosRankSum=-0.605;VQSLOD=1.2367;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:49:5.77:0,6,212	0/0:15,0:12:18.03:0,18,220	./.	0/0:15,0:2:6.02:0,6,93	0/0:53,0:52:17.45:0,17,271	0/0:19,0:16:5.39:0,5,193	0/0:21,0:20:8.75:0,9,118	0/0:22,0:17:51.07:0,51,656	0/0:18,0:18:11.52:0,12,111	0/1:37,2:38:99:270,0,703	0/0:13,0:13:4.75:0,5,101	0/0:20,0:18:15.96:0,16,168	0/0:39,0:36:40.34:0,40,469	1/1:20,0:20:1.12:14,1,0	0/0:24,0:24:7.66:0,8,97	0/0:17,0:15:14.71:0,15,222	0/0:17,0:15:18.71:0,19,249	0/0:5,0:4:6:0,6,65	0/0:19,0:15:39.08:0,39,501	0/1:34,1:33:17.85:18,0,158	0/0:30,0:28:9.47:0,9,112	0/0:41,0:40:4.57:0,5,64	0/0:26,0:24:2.99:0,3,22	0/1:10,0:9:8.61:9,0,57	0/1:20,2:21:41.31:41,0,55	0/1:30,1:27:20.37:20,0,734	0/0:20,2:22:12.24:0,12,340	0/1:19,1:16:90.54:91,0,154
chr10	58240430	.	A	AC	15498.74	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-17.891;DP=719;FS=0.564;HRun=0;HaplotypeScore=66.4118;InbreedingCoeff=0.9978;MQ=67.73;MQ0=0;MQRankSum=0.719;QD=43.41;ReadPosRankSum=1.662;VQSLOD=5.4297;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:78.26:0,78,1089	1/1:1,19:20:45.15:719,45,0	0/0:16,0:16:48.11:0,48,631	0/0:12,0:12:36.07:0,36,461	0/0:35,0:35:99:0,105,1421	0/0:27,0:27:81.26:0,81,1116	0/0:16,0:16:48.16:0,48,671	1/1:0,27:27:81.25:1248,81,0	1/1:1,29:30:84.29:1343,84,0	1/1:0,35:35:99:1574,105,0	1/1:0,17:17:39.13:617,39,0	0/0:28,0:28:78.26:0,78,1091	0/0:24,0:24:69.23:0,69,965	0/0:33,0:33:96.31:0,96,1325	1/1:1,28:29:75.26:1198,75,0	0/0:31,0:31:93.31:0,93,1300	1/1:0,26:26:75.26:1199,75,0	0/0:24,0:24:66.22:0,66,915	1/1:0,19:19:51.17:805,51,0	1/1:0,30:30:78.27:1244,78,0	1/1:0,25:25:72.25:1151,72,0	0/0:43,0:43:99:0,129,1735	0/0:28,0:28:84.28:0,84,1175	0/0:19,0:19:57.19:0,57,797	1/1:0,26:26:75.26:1198,75,0	1/1:1,32:33:96.33:1526,96,0	1/1:1,33:34:90.31:1438,90,0	1/1:0,6:6:15.05:237,15,0
chr10	58242936	.	CT	C	7491.08	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=13.850;DP=615;FS=8.237;HRun=8;HaplotypeScore=76.8004;InbreedingCoeff=0.9979;MQ=87.07;MQ0=0;MQRankSum=-3.360;QD=25.65;ReadPosRankSum=2.158;VQSLOD=5.5515;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,153,1809	1/1:0,6:6:18.03:174,18,0	0/0:28,0:28:21.27:0,21,567	0/0:18,0:18:37.76:0,38,379	0/0:23,0:23:63.19:0,63,761	0/0:20,0:20:54.15:0,54,641	0/0:30,0:30:84.25:0,84,1003	1/1:5,17:22:51.08:493,51,0	1/1:1,14:15:39.06:377,39,0	1/1:2,25:27:72.10:689,72,0	1/1:0,22:22:66.11:637,66,0	0/0:18,0:18:45.13:0,45,533	0/0:19,0:19:54.15:0,54,639	0/0:11,0:11:33.10:0,33,399	1/1:1,17:19:50.11:470,50,0	0/0:17,0:17:48.15:0,48,580	1/1:3,18:21:51.08:493,51,0	0/0:28,0:28:78.24:0,78,941	1/1:3,18:21:54.07:516,54,0	1/1:0,21:21:60.09:579,60,0	1/1:4,24:28:69.11:666,69,0	0/0:19,0:19:57.17:0,57,689	0/0:18,0:18:29.26:0,29,570	0/0:21,0:21:60.18:0,60,724	1/1:2,23:25:69.11:666,69,0	1/1:2,20:22:60.10:580,60,0	1/1:0,23:23:66.11:637,66,0	1/1:1,19:20:23.86:514,24,0
chr10	58247673	.	TCTA	T	2222.78	PASS	AB=0.895;AC=23;AF=0.442;AN=52;BaseQRankSum=-4.300;DP=593;FS=15.896;HRun=0;HaplotypeScore=117.7636;InbreedingCoeff=0.5761;MQ=72.19;MQ0=1;MQRankSum=4.120;QD=7.88;ReadPosRankSum=0.819;VQSLOD=1.7906;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:22:12.04:0,12,154	0/0:10,0:10:6.02:0,6,78	./.	./.	0/0:15,0:21:12.04:0,12,152	0/0:9,0:19:18.06:0,18,234	0/0:23,0:23:15:0,15,150	0/0:22,0:22:2.97:0,3,20	1/1:10,18:29:35.95:445,36,0	0/1:20,6:26:36.21:212,0,36	1/1:9,6:15:6.02:78,6,0	0/0:11,0:23:24.04:0,24,283	0/0:17,0:17:7.20:0,7,417	0/1:18,2:20:15.15:15,0,319	1/1:11,13:25:27.05:335,27,0	0/0:14,0:24:9:0,9,107	0/1:19,1:27:49.81:50,0,350	0/0:17,0:22:11.29:0,11,99	1/1:14,0:14:3:25,3,0	1/1:16,8:25:20.98:236,21,0	1/1:16,8:24:18.06:235,18,0	0/0:14,0:22:12.04:0,12,173	0/0:10,0:18:6.02:0,6,78	0/0:24,0:24:16.59:0,17,213	1/1:10,6:16:6.02:78,6,0	1/1:14,4:18:12.04:157,12,0	1/1:22,11:32:39.13:505,39,0	1/1:9,1:10:3.01:39,3,0
chr10	58251321	.	T	TA	1980.12	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-4.314;DP=606;FS=17.296;HRun=1;HaplotypeScore=74.5178;InbreedingCoeff=0.9883;MQ=51.59;MQ0=48;MQRankSum=0.500;QD=27.89;ReadPosRankSum=0.083;VQSLOD=2.1227;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,41:41:75.25:1195,75,0	0/0:8,0:8:24.08:0,24,332	0/0:15,0:9:27.08:0,27,361	0/0:10,0:8:14.68:0,15,207	1/1:1,29:27:57.19:907,57,0	0/0:21,0:20:60.19:0,60,817	0/0:21,0:20:57.16:0,57,771	0/0:22,0:17:51.16:0,51,690	0/0:20,0:19:54.14:0,54,732	0/0:27,0:23:69.23:0,69,962	0/0:19,0:18:51.14:0,51,690	0/0:22,0:21:57.14:0,57,758	0/0:22,0:21:57.15:0,57,774	0/0:26,0:25:72.21:0,72,982	0/0:19,0:17:48.08:0,48,627	0/0:23,0:20:60.17:0,60,817	0/0:29,0:26:75.17:0,75,986	0/0:17,0:14:42.14:0,42,584	0/0:12,0:10:30.10:0,30,416	0/0:24,0:24:72.20:0,72,983	0/0:35,0:33:90.30:0,90,1252	0/0:15,0:15:45.12:0,45,606	0/0:20,0:20:48.13:0,48,648	0/0:20,0:20:59.85:0,60,764	0/0:20,0:19:57.09:0,57,727	0/0:30,0:28:81.26:0,81,1112	0/0:27,0:25:75.13:0,75,982	0/0:11,0:9:23.97:0,24,255
chr10	58251964	.	GT	G	15832.51	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=10.704;DP=633;FS=2.116;HRun=4;HaplotypeScore=88.6517;InbreedingCoeff=0.9990;MQ=87.58;MQ0=0;MQRankSum=-5.345;QD=32.78;ReadPosRankSum=3.405;VQSLOD=5.3759;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:88.94:0,89,1276	1/1:0,11:11:29.93:360,30,0	0/0:28,0:28:74.27:0,74,981	0/0:17,0:17:36.08:0,36,462	0/0:16,0:16:42.14:0,42,587	1/1:1,16:17:42.13:504,42,0	1/1:1,18:19:42.13:502,42,0	1/1:0,23:24:71.40:809,71,0	1/1:0,25:25:72.22:863,72,0	1/1:1,28:29:81.25:971,81,0	1/1:0,20:20:57.17:683,57,0	1/1:0,23:23:66.20:792,66,0	0/0:23,0:23:60.20:0,60,839	0/0:33,1:34:57.33:0,57,1223	1/1:0,24:24:69.21:827,69,0	1/1:2,22:24:63.19:756,63,0	1/1:1,17:18:45.14:540,45,0	1/1:0,17:17:48.15:576,48,0	1/1:0,17:17:51.16:612,51,0	1/1:2,27:29:72.20:850,72,0	1/1:2,44:46:99:1547,129,0	1/1:0,25:25:66.20:791,66,0	1/1:3,20:23:60.18:720,60,0	1/1:0,23:23:63.19:756,63,0	1/1:0,14:14:42.13:504,42,0	1/1:0,22:22:66.20:792,66,0	1/1:1,24:25:69.21:827,69,0	1/1:0,8:8:21.06:252,21,0
chr10	58252137	.	CGATCAGA	C	15854.91	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=13.628;DP=675;FS=1.771;HRun=0;HaplotypeScore=177.6539;InbreedingCoeff=0.9979;MQ=84.57;MQ0=0;MQRankSum=-19.481;QD=65.25;ReadPosRankSum=1.460;VQSLOD=4.9369;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,105,4162	0/0:8,0:8:24.08:0,24,969	0/0:27,0:27:78.25:0,78,2606	0/0:22,0:22:63.21:0,63,2028	0/0:32,0:32:93.32:0,93,3667	0/0:19,0:19:57.20:0,57,2223	0/0:23,0:23:69.24:0,69,2730	0/0:31,0:31:90.31:0,90,3388	1/1:4,26:29:66.23:1734,66,0	1/1:0,21:21:63.22:1660,63,0	1/1:1,16:17:36.12:936,36,0	0/0:33,0:33:96.33:0,96,3826	0/0:33,0:33:99:0,99,3976	0/0:27,0:27:81.28:0,81,3184	1/1:1,27:28:75.26:1970,75,0	0/0:27,0:27:81.28:0,81,3194	0/0:23,0:23:69.24:0,69,2702	0/0:17,0:17:51.18:0,51,2059	1/1:4,23:27:66.21:1685,66,0	1/1:1,27:28:81.28:2101,81,0	1/1:4,11:15:21.03:478,21,0	0/0:24,0:24:72.25:0,72,2802	0/0:27,0:27:81.28:0,81,3268	0/0:23,0:23:66.23:0,66,2665	1/1:2,24:26:69.24:1807,69,0	1/1:1,25:26:72.25:1844,72,0	1/1:1,17:18:45.15:1166,45,0	1/1:0,7:7:18.06:474,18,0
chr10	58253175	.	TTC	T	2551.58	PASS	AB=1.000;AC=42;AF=0.750;AN=56;BaseQRankSum=-4.644;DP=335;FS=2.674;HRun=0;HaplotypeScore=58.7303;InbreedingCoeff=0.2110;MQ=71.33;MQ0=6;MQRankSum=1.743;QD=8.89;ReadPosRankSum=-2.082;VQSLOD=2.9567;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,2:9:26.87:230,27,0	1/1:8,0:8:1.87:32,2,0	0/0:21,0:12:2.22:0,2,156	0/0:17,0:9:10.29:0,10,74	1/1:11,1:12:9.37:215,9,0	0/1:12,0:12:8.19:83,0,8	1/1:9,0:9:8.80:78,9,0	1/1:28,0:28:21.68:314,22,0	1/1:13,0:13:12.70:141,13,0	1/1:7,0:7:2.96:91,3,0	1/1:11,0:11:11.36:89,11,0	0/0:4,0:4:4.34:0,4,16	0/0:6,0:6:7.89:0,8,154	0/1:7,0:7:3.86:4,0,154	0/1:13,0:13:6.81:66,0,7	1/1:7,0:7:15.34:105,15,0	1/1:21,1:21:9.81:167,10,0	0/1:11,0:10:14.99:44,0,15	0/1:16,0:15:10.33:95,0,10	1/1:15,0:14:11.85:178,12,0	1/1:11,0:11:10.02:110,10,0	1/1:15,0:15:5.22:138,5,0	1/1:10,0:10:1.14:130,1,0	1/1:8,0:8:4.66:22,5,0	1/1:8,0:8:2.10:49,2,0	1/1:9,0:9:4.55:72,5,0	0/1:19,0:19:4.92:115,0,5	1/1:6,0:6:8.89:135,9,0
chr10	58253176	.	TC	T	4588.25	PASS	AB=1.000;AC=49;AF=0.875;AN=56;BaseQRankSum=-1.234;DP=345;FS=35.258;HRun=1;HaplotypeScore=52.6203;InbreedingCoeff=0.6786;MQ=71.03;MQ0=6;MQRankSum=-2.582;QD=15.35;ReadPosRankSum=-1.898;VQSLOD=2.3868;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,0:9:26.85:211,27,0	1/1:1,7:8:8.93:68,9,0	0/0:21,1:12:5.71:0,6,118	0/0:18,0:9:4:0,4,62	1/1:12,2:14:13.41:232,13,0	1/1:11,0:11:19.97:131,20,0	1/1:9,0:9:18.73:126,19,0	1/1:26,1:27:63.46:487,63,0	1/1:11,1:12:29.68:230,30,0	1/1:6,1:7:18.47:148,18,0	1/1:10,0:10:21.46:143,21,0	1/1:4,0:4:6.68:27,7,0	0/0:6,0:6:14.69:0,15,118	0/1:10,0:10:9.52:10,0,106	1/1:13,0:13:30.79:199,31,0	1/1:7,0:7:20.80:158,21,0	1/1:22,0:21:43.87:367,44,0	1/1:11,0:10:22.19:140,22,0	1/1:17,0:16:34.38:234,34,0	1/1:16,1:16:37.66:266,38,0	1/1:11,0:11:30.83:216,31,0	1/1:15,0:15:37.74:245,38,0	1/1:11,0:11:27.31:204,27,0	1/1:7,0:7:8.13:45,8,0	1/1:7,0:7:16.69:118,17,0	1/1:13,0:13:26.34:155,26,0	1/1:19,1:20:45.83:292,46,0	1/1:5,1:6:17.02:136,17,0
chr10	58253276	.	CTT	C	1475.28	PASS	AB=0.694;AC=43;AF=0.796;AN=54;BaseQRankSum=0.439;DP=205;FS=7.549;HRun=16;HaplotypeScore=29.0779;InbreedingCoeff=0.3638;MQ=56.94;MQ0=14;MQRankSum=4.433;QD=8.24;ReadPosRankSum=5.198;VQSLOD=-0.6487;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,8:10:11.92:100,12,0	1/1:1,1:2:2.99:25,3,0	0/0:9,0:5:5.98:0,6,54	./.	1/1:2,8:10:23.96:200,24,0	1/1:5,0:11:9.61:45,10,0	1/1:3,0:5:5.42:23,5,0	0/1:8,1:9:3.45:19,0,3	1/1:2,1:2:2.96:25,3,0	1/1:3,6:8:17.93:151,18,0	1/1:6,7:13:4.59:90,5,0	1/1:1,0:2:2.74:12,3,0	0/0:6,0:6:14.91:0,15,126	0/0:6,0:6:11.94:0,12,118	1/1:2,2:6:13.75:109,14,0	1/1:0,0:3:5.49:24,5,0	1/1:3,3:6:2.86:25,3,0	1/1:3,0:5:8.02:34,8,0	0/1:11,4:18:26.38:55,0,26	1/1:5,9:13:7.48:136,7,0	0/0:4,0:3:1.82:0,2,5	1/1:5,0:9:15.71:65,16,0	1/1:1,0:7:13.71:59,14,0	1/1:0,0:1:2.74:12,3,0	1/1:3,4:6:5.01:91,5,0	0/1:1,3:5:3.10:58,0,3	1/1:2,7:9:20.91:175,21,0	1/1:0,3:4:11.73:87,12,0
chr10	58260588	.	T	TC	143.92	PASS	AB=1.000;AC=15;AF=0.441;AN=34;BaseQRankSum=4.420;DP=291;DS;FS=10.062;HRun=0;HaplotypeScore=26.9569;InbreedingCoeff=0.4589;MQ=33.83;MQ0=82;MQRankSum=-2.256;QD=2.15;ReadPosRankSum=-3.496;VQSLOD=-0.7448;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,2:2:3.01:46,3,0	0/0:7,0:2:2.96:0,3,19	0/0:36,0:13:39.09:0,39,502	0/0:32,0:10:24.08:0,24,331	./.	1/1:0,2:1:3.01:47,3,0	./.	1/1:24,0:2:5.85:36,6,0	./.	0/0:13,0:5:8.95:0,9,77	./.	./.	0/0:29,0:23:5.35:0,5,770	0/0:22,0:20:57.15:0,57,773	1/1:5,0:1:2.84:14,3,0	./.	1/1:3,2:2:3.01:47,3,0	./.	1/1:16,0:2:5.85:34,6,0	0/0:21,0:2:0:0,0,0	./.	./.	0/0:14,0:3:2.97:0,3,20	./.	0/0:7,0:3:8.99:0,9,102	1/1:6,0:2:2.90:16,3,0	0/1:4,0:3:26.56:27,0,32	./.
chr10	58261406	.	G	GTATC	8776.15	PASS	AC=46;AF=0.852;AN=54;BaseQRankSum=2.930;DP=698;FS=2.442;HRun=0;HaplotypeScore=260.7012;InbreedingCoeff=0.6450;MQ=50.04;MQ0=2;MQRankSum=-4.658;QD=14.70;ReadPosRankSum=-0.767;VQSLOD=4.4442;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:8,22:32:0.64:14,1,0	1/1:17,1:17:5.80:65,6,0	0/0:18,0:13:21.04:0,21,418	0/0:14,0:7:20.55:0,21,313	1/1:9,22:32:2.94:18,3,0	1/1:14,3:17:10.96:81,11,0	1/1:16,0:13:18.05:328,18,0	1/1:41,0:41:99:1812,111,0	1/1:19,6:25:26.86:388,27,0	1/1:10,25:36:99:1562,103,0	1/1:5,20:26:2.91:18,3,0	1/1:18,2:20:2.37:8,2,0	0/0:24,0:24:68.23:0,68,1108	0/0:28,0:28:78.27:0,78,1421	1/1:6,21:27:8.19:58,8,0	1/1:6,25:31:14.27:245,14,0	1/1:3,14:17:9.03:137,9,0	1/1:11,0:11:18.05:253,18,0	1/1:10,2:12:33:590,33,0	1/1:9,30:41:5.17:20,5,0	1/1:14,0:14:18.05:312,18,0	1/1:30,7:37:2.97:49,3,0	1/1:22,4:26:2.88:46,3,0	./.	1/1:4,22:28:5.99:69,6,0	1/1:9,29:38:99:1820,102,0	1/1:11,20:36:22.12:295,22,0	1/1:11,4:15:30.10:586,30,0
chr10	58261438	.	GTATGTATGTATGTATGTATGTATCTATC	G	1250.12	PASS	AB=0.838;AC=11;AF=0.204;AN=54;BaseQRankSum=1.530;DP=589;FS=5.432;HRun=0;HaplotypeScore=300.1633;InbreedingCoeff=0.5478;MQ=52.07;MQ0=7;MQRankSum=-5.121;QD=9.92;ReadPosRankSum=0.502;VQSLOD=1.9523;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:23.59:0,24,1666	0/0:21,0:20:6.49:0,6,300	0/0:10,0:7:9.03:0,9,161	0/0:5,0:3:3.01:0,3,103	0/0:28,0:28:30.10:0,30,2748	1/1:11,0:11:17.98:646,18,0	0/1:15,0:14:7.99:42,0,8	0/0:34,0:31:78.21:0,78,1796	0/0:26,0:25:33.05:0,33,1570	0/0:30,0:28:81.26:0,81,4408	0/0:27,0:27:19.99:0,20,1314	1/1:2,19:21:5.23:209,5,0	0/0:23,0:23:63.22:0,63,4246	0/0:32,0:32:84.27:0,84,5789	0/0:25,0:25:12.04:0,12,637	1/1:19,0:19:3.01:126,3,0	0/0:19,0:18:15.52:0,16,1027	0/1:8,0:8:99:263,0,149	0/0:13,0:13:27.08:0,27,602	0/0:33,0:33:32.65:0,33,1716	0/0:15,0:15:23.24:0,23,1256	0/1:2,33:35:0:0,0,0	1/1:1,16:17:3.01:105,3,0	./.	0/0:25,0:23:12.04:0,12,664	0/0:27,0:27:63.22:0,63,2932	0/0:24,0:24:24.08:0,24,1376	0/0:10,0:10:12.04:0,12,437
chr10	58261454	.	GTATGTATC	G	3051.54	PASS	AB=1.000;AC=33;AF=0.635;AN=52;BaseQRankSum=1.967;DP=585;FS=15.706;HRun=0;HaplotypeScore=182.9602;InbreedingCoeff=0.1720;MQ=52.60;MQ0=8;MQRankSum=-1.778;QD=6.42;ReadPosRankSum=-2.364;VQSLOD=1.3000;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:23:46.26:46,0,76	1/1:2,18:19:5.26:73,5,0	./.	./.	0/0:29,0:29:45.03:0,45,857	1/1:14,0:14:20.48:133,20,0	0/0:13,0:12:0.47:0,0,1	1/1:31,0:26:18.59:259,19,0	0/1:31,0:30:15.88:16,0,145	0/1:36,0:32:99:314,0,323	1/1:25,0:25:29.37:374,29,0	1/1:21,0:21:4.83:39,5,0	0/0:24,0:24:68.98:0,69,926	0/0:30,0:30:53.01:0,53,1445	1/1:25,0:25:17.98:153,18,0	1/1:21,0:21:5.94:43,6,0	1/1:18,1:18:17.80:284,18,0	0/1:9,0:9:2.98:44,0,3	0/1:8,0:7:19.03:66,0,19	1/1:39,0:39:23.06:321,23,0	0/1:19,0:19:93.06:93,0,114	0/1:33,0:33:0:0,0,0	1/1:16,0:16:2.92:17,3,0	0/0:11,0:11:0.47:0,0,1	1/1:25,0:23:15.97:192,16,0	0/1:26,0:25:99:325,0,223	1/1:26,0:26:38.84:370,39,0	0/1:8,0:8:30.97:48,0,31
chr10	58261458	.	GTATCTATC	G	5270.95	PASS	AB=1.000;AC=35;AF=0.700;AN=50;BaseQRankSum=-2.439;DP=581;FS=4.974;HRun=0;HaplotypeScore=188.8163;InbreedingCoeff=0.6907;MQ=52.65;MQ0=9;MQRankSum=0.223;QD=12.89;ReadPosRankSum=-1.610;VQSLOD=2.8782;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:24:17.72:0,18,214	1/1:19,0:18:5.18:39,5,0	./.	./.	0/0:29,0:29:45.15:0,45,1161	1/1:15,0:15:2.83:50,3,0	1/1:16,0:15:8.62:133,9,0	0/0:28,0:22:5.89:0,6,38	1/1:9,21:29:8.82:93,9,0	1/1:35,1:33:1.86:677,2,0	1/1:23,2:25:29.44:611,29,0	1/1:20,0:21:4.83:46,5,0	0/0:26,0:26:39.10:0,39,832	0/0:27,0:27:45.15:0,45,1344	1/1:22,2:24:18.06:301,18,0	1/1:21,0:21:9.03:148,9,0	1/1:20,0:19:8.57:142,9,0	0/0:6,0:9:5.85:0,6,46	1/1:9,0:7:6.02:130,6,0	1/1:32,3:35:44.51:665,45,0	1/1:19,0:21:17.97:321,18,0	0/1:33,0:33:0:0,0,0	./.	0/0:10,0:11:0.47:0,0,1	1/1:24,2:24:23.79:425,24,0	1/1:22,2:23:33.11:683,33,0	1/1:24,2:26:45.10:733,45,0	1/1:3,5:8:3.01:75,3,0
chr10	58264008	.	A	ATGGTATTGGTCAATCTTCTGAGTTGA	41027.98	PASS	AB=0.893;AC=52;AF=0.963;AN=54;BaseQRankSum=-3.265;DP=265;FS=2.228;HRun=0;HaplotypeScore=312.9786;InbreedingCoeff=-0.0505;MQ=81.05;MQ0=0;MQRankSum=-0.851;QD=154.82;ReadPosRankSum=0.601;VQSLOD=4.2730;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:21:57.20:3619,57,0	1/1:9,0:9:9.34:2049,9,0	1/1:10,0:6:36.11:2270,36,0	0/1:8,1:6:3.24:1762,0,3	1/1:8,0:8:17.55:479,18,0	1/1:8,0:8:23.90:1708,24,0	1/1:8,0:8:21.07:1018,21,0	1/1:13,0:13:36.10:2019,36,0	1/1:9,0:9:9.51:1172,10,0	1/1:9,0:9:21.07:805,21,0	1/1:5,0:5:11.83:1120,12,0	0/1:10,0:10:12.96:884,0,13	1/1:12,0:12:30.09:1953,30,0	1/1:15,0:15:41.32:2851,41,0	1/1:9,0:9:26.67:1890,27,0	1/1:19,0:19:47.38:2620,47,0	1/1:8,0:8:9.03:583,9,0	1/1:3,0:3:8.99:580,9,0	1/1:4,0:4:7.84:294,8,0	1/1:9,0:9:12.85:1269,13,0	1/1:5,0:5:9.03:218,9,0	1/1:13,0:13:26.23:1999,26,0	1/1:3,0:3:9.03:476,9,0	1/1:8,0:8:17.65:961,18,0	1/1:10,0:10:30.10:2538,30,0	1/1:11,0:11:31.66:2057,32,0	1/1:13,0:13:39.13:1833,39,0	./.
chr10	58264605	.	ATT	A	12803.55	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=0.274;DP=720;FS=0.278;HRun=5;HaplotypeScore=99.5412;InbreedingCoeff=0.9978;MQ=83.54;MQ0=1;MQRankSum=-4.719;QD=36.48;ReadPosRankSum=0.621;VQSLOD=4.1095;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:58:99:0,169,3020	1/1:0,20:20:48.16:671,48,0	0/0:20,0:20:57.19:0,57,1026	0/0:25,0:25:69.16:0,69,1077	0/0:21,0:21:54.17:0,54,957	0/0:14,0:13:42.13:0,42,741	0/0:18,0:18:51.17:0,51,934	1/1:3,24:27:72.24:1008,72,0	1/1:0,28:28:81.27:1133,81,0	1/1:2,31:32:90.26:1206,90,0	1/1:0,10:10:30.10:419,30,0	0/0:22,0:22:63.19:0,63,1077	0/0:19,0:19:57.17:0,57,986	0/0:36,0:36:99:0,108,1929	1/1:0,28:28:75.25:1049,75,0	0/0:33,0:33:96.32:0,96,1724	1/1:0,22:22:54.18:755,54,0	0/0:23,0:23:69.22:0,69,1234	1/1:1,19:20:54.17:742,54,0	1/1:2,19:21:56.98:720,57,0	1/1:6,45:51:99:1781,129,0	0/0:28,0:28:84.29:0,84,1539	0/0:19,0:19:57.20:0,57,1044	0/0:33,0:33:99:0,99,1807	1/1:1,16:17:45.15:630,45,0	1/1:0,27:27:81.21:1093,81,0	1/1:1,35:36:99:1385,99,0	1/1:3,8:11:15.05:210,15,0
chr10	58266854	.	T	TC	8718.82	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-14.314;DP=600;FS=1.796;HRun=3;HaplotypeScore=59.6232;InbreedingCoeff=0.9966;MQ=85.70;MQ0=0;MQRankSum=-2.269;QD=36.03;ReadPosRankSum=2.298;VQSLOD=5.5269;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,99,1137	0/0:14,0:14:42.08:0,42,476	0/0:19,0:19:50.53:0,51,496	0/0:19,0:19:41.27:0,41,501	0/0:19,0:19:48.05:0,48,544	0/0:24,0:24:72.20:0,72,851	0/0:20,0:20:60.13:0,60,691	0/0:25,0:24:54.11:0,54,614	1/1:0,21:21:60.20:837,60,0	1/1:2,26:28:75.23:1016,75,0	1/1:0,20:20:45.15:629,45,0	0/0:17,0:17:51.16:0,51,611	0/0:13,0:13:36.06:0,36,406	0/0:21,0:21:60.17:0,60,709	1/1:0,22:22:60.20:840,60,0	0/0:19,0:19:48.11:0,48,559	0/0:36,0:36:99:0,105,1236	0/0:19,0:19:54.13:0,54,632	1/1:2,18:21:57.12:742,57,0	1/1:0,20:20:48.16:665,48,0	1/1:2,33:35:87.29:1217,87,0	0/0:14,0:14:42.12:0,42,489	0/0:18,1:19:15.19:0,15,605	0/0:25,0:25:72.18:0,72,847	1/1:0,13:13:39.13:546,39,0	1/1:1,21:23:69.12:884,69,0	1/1:4,28:32:78.26:1091,78,0	1/1:0,7:7:18.06:251,18,0
chr10	58270357	.	TTTTTTG	T	11286.68	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=6.340;DP=599;FS=8.937;HRun=0;HaplotypeScore=132.0738;InbreedingCoeff=0.9101;MQ=58.83;MQ0=1;MQRankSum=-7.596;QD=24.32;ReadPosRankSum=3.387;VQSLOD=4.1400;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:13,11:24:28.33:570,28,0	0/0:2,0:4:6.02:0,6,157	0/0:15,0:13:9.03:0,9,220	0/0:18,0:16:16.30:0,16,379	1/1:9,22:31:51.09:923,51,0	1/1:4,13:17:27.09:550,27,0	1/1:12,13:25:33.07:623,33,0	0/0:31,0:30:39.11:0,39,795	1/1:12,9:21:21.07:428,21,0	1/1:6,8:14:24.08:467,24,0	1/1:14,14:28:33.11:661,33,0	1/1:5,13:18:27.09:541,27,0	0/0:16,0:16:33.11:0,33,1061	0/0:25,0:25:57.19:0,57,1757	1/1:8,9:17:20.65:420,21,0	1/1:6,12:18:20.99:428,21,0	0/0:16,0:26:40.37:0,40,881	1/1:8,8:16:21.07:428,21,0	1/1:22,7:27:18.01:245,18,0	1/1:13,20:33:51.18:1029,51,0	1/1:14,8:22:1.25:58,1,0	1/1:11,15:26:42.10:785,42,0	1/1:7,14:21:36.08:671,36,0	1/1:6,16:22:11.12:202,11,0	1/1:5,13:18:33.11:654,33,0	1/1:15,16:31:45.13:879,45,0	1/1:10,11:21:24.08:489,24,0	1/1:7,5:11:12.04:237,12,0
chr10	58273220	.	G	GC	10069.92	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=18.138;DP=684;FS=9.451;HRun=0;HaplotypeScore=84.6361;InbreedingCoeff=0.9999;MQ=86.59;MQ0=0;MQRankSum=-2.732;QD=39.34;ReadPosRankSum=2.441;VQSLOD=4.9559;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,108,1445	0/0:15,0:15:45.11:0,45,593	0/0:18,0:18:40.60:0,41,579	0/0:28,0:28:68.99:0,69,925	0/0:24,0:24:66.20:0,66,887	0/0:16,0:16:48.15:0,48,654	0/0:31,0:31:90.28:0,90,1222	0/0:34,0:34:87.28:0,87,1187	1/1:0,22:22:54.18:817,54,0	1/1:0,28:28:84.08:1180,84,0	1/1:1,13:14:36:520,36,0	0/0:17,0:17:51.16:0,51,690	0/0:31,0:31:93.31:0,93,1298	0/0:30,0:30:90.26:0,90,1193	1/1:0,20:20:57.19:870,57,0	0/0:22,0:22:66.20:0,66,888	0/0:26,0:26:78.23:0,78,1055	0/0:33,0:33:96.20:0,96,1244	1/1:2,25:27:74.88:1042,75,0	1/1:0,14:14:39.12:555,39,0	1/1:0,39:39:93.32:1407,93,0	0/0:16,0:16:48.15:0,48,655	0/0:21,0:21:63.19:0,63,847	0/0:30,0:29:90.29:0,90,1242	1/1:0,32:32:84.28:1267,84,0	1/1:0,30:30:86.96:1181,87,0	1/1:2,17:19:48.07:728,48,0	1/1:0,11:11:33.11:502,33,0
chr10	58275909	.	TAA	T	6382.21	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=4.408;DP=479;FS=0.000;HRun=10;HaplotypeScore=92.7384;InbreedingCoeff=0.9812;MQ=69.90;MQ0=0;MQRankSum=-0.494;QD=25.13;ReadPosRankSum=-0.794;VQSLOD=4.4956;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:3,0:38:79.85:0,80,274	1/1:4,8:12:21.05:234,21,0	0/0:10,0:9:17.64:0,18,232	0/0:6,0:6:10.28:0,10,139	0/0:3,0:18:35.41:0,35,131	0/0:1,0:11:22.46:0,22,77	0/0:1,0:18:37.43:0,37,129	1/1:3,21:24:63.14:692,63,0	1/1:1,8:9:18.05:201,18,0	1/1:2,11:13:33.09:368,33,0	1/1:2,12:14:21.01:234,21,0	0/0:2,0:22:44.92:0,45,154	0/0:13,0:13:36.12:0,36,570	0/0:4,0:4:12.04:0,12,183	1/1:2,15:17:39.10:435,39,0	0/0:2,0:16:34.93:0,35,120	1/1:6,20:26:51.06:568,51,0	0/0:0,0:17:40.41:0,40,150	1/1:2,15:17:45.12:501,45,0	1/1:1,29:30:75.11:820,75,0	1/1:0,13:13:27.07:301,27,0	0/0:2,0:17:37.43:0,37,129	0/0:2,0:21:48.40:0,48,188	0/0:1,0:14:27.45:0,27,94	1/1:3,22:25:54.14:602,54,0	1/1:3,18:21:54.12:591,54,0	1/1:3,23:26:63.16:702,63,0	1/1:0,7:7:12.03:134,12,0
chr10	58276021	.	GA	G	11847.11	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=12.726;DP=576;FS=14.006;HRun=3;HaplotypeScore=63.1164;InbreedingCoeff=0.9947;MQ=84.79;MQ0=0;MQRankSum=-1.984;QD=32.55;ReadPosRankSum=5.359;VQSLOD=3.6411;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,141,1970	0/0:14,0:14:36.11:0,36,498	0/0:19,0:19:51.15:0,51,685	0/0:15,0:15:39.13:0,39,539	0/0:21,0:21:63.17:0,63,865	1/1:1,16:17:42.13:520,42,0	1/1:1,17:18:42.13:520,42,0	0/0:33,0:33:96.28:0,96,1311	1/1:0,13:13:36.11:446,36,0	1/1:2,17:19:51.06:573,51,0	1/1:1,19:20:51.16:632,51,0	1/1:1,13:14:27.08:335,27,0	0/0:21,0:21:63.20:0,63,887	0/0:9,0:9:27.08:0,27,370	1/1:0,11:11:33.10:409,33,0	1/1:0,12:12:36.11:446,36,0	0/0:32,0:32:96.24:0,96,1319	1/1:0,20:20:57.18:706,57,0	1/1:1,17:18:51.14:608,51,0	1/1:1,23:24:63.02:723,63,0	1/1:0,40:40:99:1486,120,0	1/1:0,20:20:51.16:631,51,0	1/1:1,18:19:51.08:631,51,0	1/1:1,21:22:54.17:669,54,0	1/1:0,22:22:54.16:669,54,0	1/1:0,21:21:63.17:765,63,0	1/1:0,26:26:75.04:929,75,0	1/1:0,8:8:12.04:149,12,0
chr10	58278876	.	CAG	C	9492.35	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=14.031;DP=611;FS=0.316;HRun=0;HaplotypeScore=73.4942;InbreedingCoeff=0.9999;MQ=80.44;MQ0=1;MQRankSum=-1.536;QD=41.45;ReadPosRankSum=5.286;VQSLOD=6.6948;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,141,2606	0/0:11,0:11:33.05:0,33,541	0/0:19,0:19:56.67:0,57,962	0/0:21,0:20:57.12:0,57,1024	0/0:21,0:21:63.17:0,63,1156	0/0:29,0:29:87.23:0,87,1584	0/0:20,0:20:60.18:0,60,1166	0/0:21,0:21:60.19:0,60,1153	1/1:0,18:17:36.12:584,36,0	1/1:0,17:18:54.18:864,54,0	1/1:0,16:16:42.14:678,42,0	0/0:20,0:20:60.20:0,60,1181	0/0:27,0:27:81.27:0,81,1601	0/0:20,0:20:60.18:0,60,1133	1/1:0,33:33:72.25:1163,72,0	0/0:13,0:13:39.13:0,39,791	0/0:38,0:38:99:0,114,2240	0/0:16,0:16:48.16:0,48,974	1/1:0,18:18:48.16:759,48,0	1/1:0,26:26:75.21:1184,75,0	1/1:2,18:20:48.16:764,48,0	0/0:21,0:21:63.20:0,63,1231	0/0:16,0:16:48.16:0,48,973	0/0:21,0:21:63.22:0,63,1278	1/1:0,21:21:51.17:828,51,0	1/1:0,16:16:48.16:780,48,0	1/1:0,22:22:54.18:867,54,0	1/1:0,21:21:63.22:1021,63,0
chr10	58284124	.	AACACACACAC	A	1264.01	PASS	AB=0.885;AC=20;AF=0.500;AN=40;BaseQRankSum=4.832;DP=483;FS=5.681;HRun=0;HaplotypeScore=129.1469;InbreedingCoeff=0.4377;MQ=63.40;MQ0=9;MQRankSum=-3.400;QD=6.48;ReadPosRankSum=-1.404;VQSLOD=1.6177;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:27:27.09:0,27,821	0/0:4,0:4:2.98:0,3,22	./.	./.	0/0:16,0:18:24.08:0,24,649	1/1:10,0:10:0.47:1,0,0	./.	0/0:18,0:17:4.57:0,5,51	1/1:10,3:12:3.01:88,3,0	1/1:21,0:21:2.74:12,3,0	./.	0/0:20,0:20:0:0,0,0	0/0:22,0:22:24.08:0,24,778	0/0:16,0:17:21.07:0,21,755	1/1:21,5:26:5.29:146,5,0	1/1:14,1:20:9.03:228,9,0	0/0:13,0:13:9.01:0,9,152	./.	1/1:17,0:17:1.51:24,2,0	1/1:15,3:19:12.04:230,12,0	0/0:20,0:20:0.89:0,1,2	./.	1/1:15,0:16:5.23:77,5,0	./.	0/1:19,2:20:26.89:337,0,27	1/1:17,3:19:5.22:175,5,0	0/1:10,2:12:14.94:82,0,15	./.
chr10	58285843	.	CAAAA	C	2793.24	PASS	AB=0.732;AC=19;AF=0.339;AN=56;BaseQRankSum=6.078;DP=572;FS=0.000;HRun=17;HaplotypeScore=104.1454;InbreedingCoeff=0.7512;MQ=77.29;MQ0=2;MQRankSum=-2.055;QD=13.83;ReadPosRankSum=8.813;VQSLOD=0.0921;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:6,1:15:33.04:33,0,75	0/0:4,0:14:26.32:0,26,287	0/0:28,0:19:19.75:0,20,248	0/1:19,0:15:1.89:2,0,74	0/1:7,1:28:32.71:47,0,33	1/1:3,23:29:60.81:731,61,0	1/1:3,10:15:20.42:234,20,0	0/0:11,0:27:52.05:0,52,618	0/0:2,0:11:14.97:0,15,223	0/0:14,0:29:78.24:0,78,1388	0/0:8,0:19:57.16:0,57,917	1/1:5,11:19:38.85:450,39,0	0/0:26,0:27:60.10:0,60,1064	0/0:9,0:11:27.04:0,27,419	0/0:13,0:23:33.09:0,33,584	1/1:5,12:17:27.56:361,28,0	0/0:14,0:27:54.07:0,54,736	1/1:4,12:17:29.90:381,30,0	0/0:18,0:25:57.11:0,57,992	0/0:7,0:22:66.14:0,66,1172	0/0:15,0:15:27.09:0,27,531	1/1:4,6:12:18.93:216,19,0	1/1:7,8:19:2.19:271,2,0	1/1:3,7:11:22.16:269,22,0	0/0:15,0:24:57.18:0,57,1003	0/0:10,0:20:48.16:0,48,932	0/0:15,0:28:39.05:0,39,675	0/0:10,0:18:45.07:0,45,835
chr10	58288286	.	TCA	T	11782.97	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=11.910;DP=1071;FS=2.149;HRun=0;HaplotypeScore=151.9961;InbreedingCoeff=0.9937;MQ=66.01;MQ0=15;MQRankSum=2.526;QD=26.36;ReadPosRankSum=5.825;VQSLOD=5.9832;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:96.29:0,96,1514	0/0:11,0:11:27.06:0,27,284	0/0:65,0:37:30.81:0,31,593	0/0:60,1:37:61.34:0,61,869	0/0:23,2:25:14.19:0,14,981	0/0:21,0:20:46.02:0,46,701	0/0:42,0:42:99:0,108,1705	0/0:39,0:38:78.13:0,78,778	1/1:8,34:41:93.67:1132,94,0	1/1:8,32:39:97.84:1170,98,0	1/1:6,22:28:60.11:710,60,0	0/0:42,0:42:99:0,114,1811	0/0:44,1:45:77.13:0,77,1697	0/0:49,0:49:99:0,126,1991	1/1:8,58:66:99:1711,138,0	0/0:39,0:39:99:0,99,1593	0/0:21,0:21:45.08:0,45,486	0/0:23,0:24:15.31:0,15,626	1/1:7,11:18:39.10:461,39,0	1/1:3,33:36:81.14:950,81,0	1/1:18,77:93:99:2455,199,0	0/0:30,0:30:67.39:0,67,1192	0/0:21,0:21:57.18:0,57,892	0/0:43,1:44:77.19:0,77,1722	1/1:4,31:35:78.25:967,78,0	1/1:8,34:41:99:1239,102,0	1/1:5,27:31:63.20:781,63,0	1/1:5,8:13:18.02:207,18,0
chr10	58290160	.	ATG	A	1488.57	PASS	AC=22;AF=0.407;AN=54;BaseQRankSum=7.135;DP=305;FS=1.894;HRun=0;HaplotypeScore=64.9626;InbreedingCoeff=0.8781;MQ=92.47;MQ0=1;MQRankSum=-8.149;QD=14.89;ReadPosRankSum=1.224;VQSLOD=2.9706;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:3,0:14:9:0,9,80	1/1:1,0:1:3.01:31,3,0	0/0:22,0:20:34.26:0,34,426	0/0:22,0:20:40.78:0,41,440	0/0:3,0:3:8.95:0,9,80	1/1:5,6:11:15:148,15,0	1/1:15,4:19:45.06:466,45,0	1/1:7,0:7:9:85,9,0	0/0:8,0:8:24.05:0,24,319	0/0:21,0:21:50.54:0,51,795	0/0:15,0:15:39.02:0,39,434	1/1:7,1:8:18.02:188,18,0	0/0:6,0:6:5.88:0,6,47	0/0:8,0:8:15.04:0,15,225	0/0:13,0:13:36.07:0,36,512	1/1:11,0:11:11.73:73,12,0	1/1:9,0:9:9.03:114,9,0	1/1:4,2:5:11.98:114,12,0	0/0:9,0:8:9.03:0,9,132	0/0:14,0:14:34.08:0,34,535	0/0:12,0:12:36.09:0,36,525	1/1:7,3:9:6.01:62,6,0	1/1:10,1:11:29.96:289,30,0	1/1:4,3:7:12.03:124,12,0	0/0:13,0:13:33.06:0,33,419	0/0:8,0:8:17.43:0,17,288	0/0:17,0:17:47.92:0,48,675	./.
chr10	58290166	.	GTGT	G	917.04	PASS	AB=0.889;AC=19;AF=0.339;AN=56;BaseQRankSum=8.965;DP=303;FS=1.281;HRun=0;HaplotypeScore=71.9772;InbreedingCoeff=0.7654;MQ=88.41;MQ0=3;MQRankSum=-9.425;QD=9.97;ReadPosRankSum=3.380;VQSLOD=3.0540;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:12.03:0,12,161	1/1:1,0:1:2.50:9,2,0	0/0:24,0:22:57.89:0,58,876	0/0:24,0:19:47.96:0,48,792	0/0:4,0:4:12.03:0,12,170	1/1:9,0:9:14.93:120,15,0	1/1:19,0:19:19.54:275,20,0	0/0:4,0:4:3.86:0,4,29	0/0:10,0:10:27.08:0,27,523	0/0:20,0:20:60.19:0,60,1192	0/0:13,0:13:39.13:0,39,719	1/1:7,0:7:17.71:122,18,0	0/0:6,0:6:11.69:0,12,127	0/0:7,0:7:17.11:0,17,340	0/0:13,0:13:36.12:0,36,733	1/1:1,10:11:12.04:191,12,0	1/1:8,0:8:6.42:32,6,0	1/1:9,0:8:3.37:50,3,0	0/0:5,0:4:9.03:0,9,184	0/0:16,0:15:44.98:0,45,835	0/0:12,0:12:36.12:0,36,738	0/1:7,1:7:16:52,0,16	1/1:13,0:13:24.47:162,24,0	1/1:7,0:7:11.95:97,12,0	0/0:13,0:13:39.12:0,39,706	0/0:10,0:10:30.07:0,30,521	0/0:16,0:16:48.16:0,48,972	0/0:1,0:1:2.99:0,3,24
chr10	58290168	.	GT	G	1116.96	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=6.876;DP=309;FS=0.000;HRun=1;HaplotypeScore=65.2620;InbreedingCoeff=0.8252;MQ=85.27;MQ0=5;MQRankSum=-8.839;QD=10.84;ReadPosRankSum=1.585;VQSLOD=1.5333;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:11.75:0,12,75	1/1:0,1:1:3.01:40,3,0	0/0:27,0:21:41.04:0,41,456	0/0:25,0:18:42.17:0,42,405	0/0:5,0:5:11.93:0,12,106	1/1:6,3:9:14.95:123,15,0	1/1:10,8:18:44.42:338,44,0	1/1:0,3:3:9:86,9,0	0/0:10,0:10:26.74:0,27,298	0/0:19,0:19:57.12:0,57,683	0/0:13,0:13:38.99:0,39,371	1/1:3,5:8:6.24:120,6,0	0/1:6,0:6:0.85:1,0,16	0/0:8,0:8:14.07:0,14,186	0/0:13,0:13:36.07:0,36,424	1/1:12,0:11:13.43:62,13,0	1/1:1,8:9:10.58:101,11,0	1/1:8,1:8:8.39:91,8,0	0/0:5,0:4:9.02:0,9,103	0/0:16,0:15:44.91:0,45,490	0/0:12,0:12:36.09:0,36,428	1/1:5,2:6:5.99:50,6,0	1/1:10,4:14:22.86:210,23,0	1/1:3,4:7:11.99:99,12,0	0/0:13,0:13:36:0,36,369	0/0:10,0:10:29:0,29,282	0/0:16,0:16:44.52:0,45,534	0/0:1,0:1:2.99:0,3,24
chr10	58290174	.	GGGGGGA	G	1908.11	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=7.143;DP=309;FS=5.882;HRun=0;HaplotypeScore=87.5702;InbreedingCoeff=0.7820;MQ=78.11;MQ0=6;MQRankSum=-8.385;QD=19.08;ReadPosRankSum=0.921;VQSLOD=2.3800;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:8:18.06:0,18,480	1/1:2,0:2:1.52:45,2,0	0/0:27,0:18:35.05:0,35,638	0/0:28,0:16:27.37:0,27,453	0/0:6,0:6:15.05:0,15,384	1/1:7,3:10:16.38:219,16,0	1/1:9,8:17:42.46:570,42,0	1/1:3,0:3:3.44:48,3,0	0/0:10,0:10:24.07:0,24,510	0/0:20,0:20:54.12:0,54,1279	0/0:9,0:9:20.90:0,21,467	1/1:4,5:9:17.48:267,17,0	0/0:6,0:6:10.36:0,10,226	0/0:8,0:8:24.08:0,24,651	0/0:16,0:16:48.15:0,48,1179	0/1:13,0:12:82.99:108,0,83	1/1:9,0:9:5.06:139,5,0	1/1:8,1:8:14.96:158,15,0	0/0:6,0:5:12.04:0,12,269	0/0:15,0:14:35.60:0,36,1104	0/0:11,0:11:30.10:0,30,868	1/1:5,2:6:6.02:96,6,0	1/1:8,4:12:20.72:260,21,0	1/1:5,4:9:14.79:199,15,0	0/0:12,0:12:27.09:0,27,662	0/0:11,0:11:27.07:0,27,566	0/0:14,0:14:42.08:0,42,1049	0/0:1,0:1:3.01:0,3,70
chr10	58290175	.	GGGGGA	G	2199.79	PASS	AB=0.929;AC=21;AF=0.375;AN=56;BaseQRankSum=5.582;DP=306;FS=1.186;HRun=0;HaplotypeScore=80.3131;InbreedingCoeff=0.8229;MQ=78.11;MQ0=6;MQRankSum=-8.521;QD=22.45;ReadPosRankSum=-0.165;VQSLOD=2.9579;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:7:18.06:0,18,409	1/1:2,0:2:5.99:51,6,0	0/0:29,0:18:34.75:0,35,534	0/0:29,0:16:24.55:0,25,380	0/0:7,0:7:17.99:0,18,341	1/1:10,0:10:22.26:273,22,0	1/1:15,2:17:46.24:613,46,0	1/1:3,0:3:5.99:49,6,0	0/0:10,0:10:23.96:0,24,441	0/0:19,0:19:53.79:0,54,1076	0/0:8,0:8:15.05:0,15,364	1/1:9,0:9:23.86:336,24,0	0/0:6,0:6:9.43:0,9,181	0/0:8,0:8:24:0,24,540	0/0:16,0:16:48.07:0,48,991	0/1:12,1:12:10.05:138,0,10	1/1:9,0:9:6.81:95,7,0	1/1:5,4:8:14.99:196,15,0	0/0:6,0:5:12.04:0,12,234	0/0:15,0:14:41.93:0,42,980	0/0:11,0:11:30.09:0,30,732	1/1:6,0:5:6.02:99,6,0	1/1:11,1:12:25.10:297,25,0	1/1:8,0:8:18.02:259,18,0	0/0:11,0:11:27.06:0,27,541	0/0:11,0:11:27.09:0,27,478	0/0:14,0:14:39.09:0,39,848	0/0:1,0:1:3.01:0,3,73
chr10	58290179	.	GA	G	1032.20	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=5.350;DP=301;FS=1.818;HRun=1;HaplotypeScore=65.8820;InbreedingCoeff=0.8745;MQ=75.49;MQ0=6;MQRankSum=-6.506;QD=10.64;ReadPosRankSum=-0.305;VQSLOD=1.4212;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:8:10.96:0,11,154	1/1:2,0:2:4.24:27,4,0	0/0:30,1:19:16.65:0,17,303	0/0:27,0:13:12.42:0,12,190	0/0:5,0:5:14.92:0,15,145	1/1:8,0:8:20.48:140,20,0	1/1:17,0:17:6.27:170,6,0	1/1:5,0:5:11.13:107,11,0	0/0:9,0:9:20.91:0,21,214	0/0:16,0:16:44.09:0,44,471	0/0:6,0:6:17.90:0,18,156	1/1:7,4:11:20.41:137,20,0	0/0:6,0:6:8.34:0,8,86	0/0:8,0:8:23.92:0,24,229	0/0:19,0:19:53.68:0,54,474	1/1:12,0:11:21.94:216,22,0	1/1:9,0:9:8.87:94,9,0	1/1:9,0:8:14.71:95,15,0	0/0:7,0:6:13.66:0,14,112	0/0:15,0:14:39.03:0,39,435	0/0:12,0:12:33.50:0,34,318	1/1:5,0:4:5.89:37,6,0	1/1:9,2:11:16.02:109,16,0	1/1:8,0:8:17.54:110,18,0	0/0:11,0:11:30.03:0,30,326	0/0:9,0:9:25.69:0,26,223	0/0:13,0:13:35.46:0,35,387	0/0:1,0:1:2.99:0,3,24
chr10	58290688	.	C	CG	1866.65	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=-1.072;DP=622;FS=9.394;HRun=5;HaplotypeScore=111.1606;InbreedingCoeff=0.8102;MQ=81.81;MQ0=0;MQRankSum=1.762;QD=17.95;ReadPosRankSum=-1.678;VQSLOD=2.1111;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,100,1054	1/1:1,5:6:15.05:197,15,0	0/1:31,0:30:30.07:30,0,482	0/0:17,0:17:0.88:0,1,310	0/0:31,0:31:81.15:0,81,839	0/0:16,0:15:48.11:0,48,508	0/0:20,0:20:54.10:0,54,563	1/1:5,23:28:63.14:778,63,0	0/0:15,0:15:33.06:0,33,346	0/0:33,0:33:84.21:0,84,902	0/0:24,0:24:66.12:0,66,697	0/0:16,0:16:39.09:0,39,419	0/0:20,0:20:51.12:0,51,547	0/0:20,0:20:54.13:0,54,580	0/0:28,0:28:69.17:0,69,740	1/1:1,0:11:23.03:119,23,0	1/1:1,27:28:69.22:905,69,0	0/0:22,0:22:60.15:0,60,645	0/0:12,0:12:33.07:0,33,347	0/0:27,0:27:72.18:0,72,773	0/0:23,0:23:61.68:0,62,640	0/0:24,0:24:57.14:0,57,611	0/0:23,0:23:57.07:0,57,587	0/0:18,0:18:54.14:0,54,580	0/0:22,0:22:66.17:0,66,709	0/0:29,0:29:75.19:0,75,805	0/0:28,0:28:78.15:0,78,818	0/0:9,0:9:27.07:0,27,290
chr10	58290857	.	GAGAAGACGTAGA	G	22368.79	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=18.553;DP=680;FS=14.353;HRun=0;HaplotypeScore=236.6528;InbreedingCoeff=0.9951;MQ=83.45;MQ0=0;MQRankSum=-18.442;QD=75.32;ReadPosRankSum=5.028;VQSLOD=3.2289;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,32:33:48.08:1738,48,0	0/0:7,0:7:21.06:0,21,1149	0/0:28,0:28:84.27:0,84,4124	0/0:28,0:28:84.19:0,84,3724	1/1:0,17:17:36.12:1381,36,0	0/0:24,0:24:72.25:0,72,4295	0/0:28,0:28:84.27:0,84,4544	0/0:45,0:45:99:0,123,6719	1/1:0,23:23:48.16:1849,48,0	1/1:1,18:19:45.09:1617,45,0	1/1:1,15:16:30.10:1147,30,0	0/0:19,0:19:54.19:0,54,3261	0/0:20,0:20:60.21:0,60,3571	0/0:36,0:36:99:0,105,6086	1/1:1,33:35:90.24:3364,90,0	0/0:28,0:28:84.18:0,84,4630	0/0:29,0:29:87.27:0,87,4964	0/0:18,0:18:51.18:0,51,2969	1/1:0,20:20:59.97:1193,60,0	1/1:0,26:26:63.22:2426,63,0	1/1:0,32:32:30.10:1149,30,0	0/0:22,0:22:66.23:0,66,3946	0/0:19,0:19:54.17:0,54,2761	0/0:32,0:32:96.33:0,96,5613	1/1:0,21:21:45.15:1732,45,0	1/1:0,26:26:69.13:2466,69,0	1/1:0,24:24:47.83:1843,48,0	1/1:0,5:5:12.04:462,12,0
chr10	58291172	.	G	GC	27845.97	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-12.699;DP=727;FS=1.886;HRun=0;HaplotypeScore=62.7613;InbreedingCoeff=0.9999;MQ=87.00;MQ0=0;MQRankSum=-9.307;QD=43.71;ReadPosRankSum=6.128;VQSLOD=4.7826;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,38:38:99:1678,105,0	1/1:0,14:14:42.14:670,42,0	0/0:26,0:26:75.19:0,75,964	0/0:22,0:22:62.55:0,63,784	1/1:0,25:26:72.23:1125,72,0	1/1:0,19:19:54.18:863,54,0	1/1:0,24:24:60.20:959,60,0	1/1:1,32:33:93.30:1440,93,0	1/1:0,20:20:51.17:815,51,0	1/1:0,29:29:84.22:1270,84,0	1/1:0,26:26:75.25:1184,75,0	1/1:1,32:33:84.29:1342,84,0	0/0:23,0:23:69.19:0,69,912	0/0:19,0:19:57.18:0,57,779	1/1:1,37:38:99:1678,105,0	1/1:0,26:26:63.21:1006,63,0	1/1:1,35:36:99:1553,99,0	1/1:0,17:17:51.17:815,51,0	1/1:0,23:23:69.21:1067,69,0	1/1:0,29:29:75.25:1186,75,0	1/1:0,46:46:99:2109,132,0	1/1:0,25:25:69.24:1103,69,0	1/1:0,24:24:66.23:1054,66,0	1/1:0,30:30:81.28:1294,81,0	1/1:0,19:19:54.18:862,54,0	1/1:0,20:20:60.20:954,60,0	1/1:0,30:30:81.28:1294,81,0	1/1:0,12:11:33.11:526,33,0
chr10	58291397	.	T	TG	3091.84	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-11.965;DP=731;FS=0.981;HRun=0;HaplotypeScore=69.2818;InbreedingCoeff=0.9997;MQ=83.30;MQ0=0;MQRankSum=-1.532;QD=41.78;ReadPosRankSum=2.319;VQSLOD=4.4110;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,44:45:99:1966,123,0	0/0:16,0:16:45.15:0,45,626	0/0:28,0:28:81.23:0,81,1048	0/0:16,0:16:48.14:0,48,619	1/1:1,28:29:78.27:1247,78,0	0/0:22,0:22:57.19:0,57,797	0/0:26,0:26:78.25:0,78,1074	0/0:28,0:28:72.23:0,72,992	0/0:15,0:15:45.15:0,45,628	0/0:32,0:32:96.32:0,96,1342	0/0:20,0:20:57.19:0,57,795	0/0:25,0:25:72.23:0,72,990	0/0:36,0:36:99:0,105,1434	0/0:31,0:31:93.30:0,93,1283	0/0:37,0:37:99:0,111,1534	0/0:30,0:30:90.27:0,90,1225	0/0:38,0:38:99:0,111,1552	0/0:15,0:15:42.14:0,42,587	0/0:15,0:15:42.14:0,42,586	0/0:25,0:25:72.24:0,72,1004	0/0:30,0:30:81.27:0,81,1133	0/0:28,0:28:84.28:0,84,1173	0/0:21,0:21:60.20:0,60,838	0/0:29,0:29:87.23:0,87,1176	0/0:29,0:29:87.26:0,87,1167	0/0:27,0:27:81.25:0,81,1115	0/0:28,0:28:81.27:0,81,1131	0/0:10,0:10:30.10:0,30,419
chr10	58291689	.	T	TTTTTTG	13460.17	PASS	AB=1.000;AC=44;AF=0.815;AN=54;BaseQRankSum=-2.918;DP=513;FS=5.145;HRun=0;HaplotypeScore=122.8223;InbreedingCoeff=0.7679;MQ=63.53;MQ0=2;MQRankSum=-6.967;QD=31.09;ReadPosRankSum=0.551;VQSLOD=4.4021;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:72.24:0,72,1440	1/1:3,5:8:18.06:527,18,0	0/1:36,0:25:1.04:1,0,352	0/1:19,0:17:58.55:59,0,224	0/0:18,0:18:42.14:0,42,868	1/1:8,13:21:30.10:994,30,0	1/1:10,11:22:24.08:789,24,0	1/1:19,13:35:44.59:1123,45,0	1/1:8,2:10:20.96:397,21,0	1/1:11,7:21:27.09:747,27,0	1/1:8,10:19:27.84:714,28,0	1/1:8,6:14:15.05:496,15,0	0/0:15,0:15:21.30:0,21,340	0/0:12,0:12:20.77:0,21,264	1/1:20,4:24:27.09:713,27,0	1/1:2,1:13:18.06:458,18,0	1/1:7,6:16:14.72:356,15,0	1/1:9,9:19:15.05:497,15,0	1/1:17,2:18:15.05:404,15,0	1/1:4,9:14:23.53:490,24,0	1/1:8,9:17:10.23:178,10,0	1/1:4,19:24:45.11:1266,45,0	1/1:6,13:20:27.32:790,27,0	1/1:9,8:17:21.07:626,21,0	1/1:7,9:16:21.96:641,22,0	1/1:9,4:13:7.25:378,7,0	1/1:12,4:16:32.56:817,33,0	./.
chr10	58291708	.	AC	A	541	PASS	AB=0.938;AC=16;AF=0.296;AN=54;BaseQRankSum=-4.098;DP=404;FS=4.132;HRun=12;HaplotypeScore=111.4487;InbreedingCoeff=0.3921;MQ=62.20;MQ0=1;MQRankSum=3.115;QD=2.88;ReadPosRankSum=2.283;VQSLOD=0.6116;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:15,10:30:40.97:276,41,0	1/1:5,2:7:5.95:46,6,0	0/1:30,2:21:7.65:8,0,233	0/1:18,1:18:6.44:11,0,6	1/1:15,4:20:22.89:168,23,0	0/0:13,0:13:29.63:0,30,206	0/0:18,0:18:35.23:0,35,223	1/1:20,0:20:6.19:38,6,0	0/0:6,0:6:8.57:0,9,60	0/0:10,0:10:2.04:0,2,6	0/0:16,0:16:6:0,6,55	0/0:7,0:7:11.85:0,12,91	0/1:10,3:13:25.49:25,0,96	1/1:7,2:9:11.94:92,12,0	0/0:16,0:17:32.78:0,33,276	0/0:10,0:10:20.75:0,21,146	0/1:14,0:14:33.58:34,0,35	0/0:16,0:16:32.41:0,32,204	0/1:11,1:11:7.69:8,0,85	0/0:13,0:13:5.85:0,6,44	0/0:10,0:10:3.01:0,3,30	0/0:26,0:26:44.36:0,44,305	0/0:17,0:17:29.52:0,30,198	0/0:17,0:17:44.02:0,44,282	0/1:10,0:11:1.04:1,0,20	0/0:7,0:7:6.01:0,6,59	0/0:13,0:12:12.07:0,12,150	./.
chr10	58292248	.	T	TG	5772.90	PASS	AB=0.638;AC=34;AF=0.607;AN=56;BaseQRankSum=-2.103;DP=612;FS=5.798;HRun=9;HaplotypeScore=101.1013;InbreedingCoeff=0.8491;MQ=85.69;MQ0=0;MQRankSum=-3.351;QD=15.52;ReadPosRankSum=-0.609;VQSLOD=4.6418;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:38:57.03:0,57,167	0/0:10,0:10:23.96:0,24,203	0/0:24,1:25:23.02:0,23,302	0/0:23,0:23:17.11:0,17,208	0/0:1,0:39:69.25:0,69,203	1/1:14,0:14:14.36:76,14,0	1/1:17,0:17:28.64:150,29,0	0/0:22,0:22:44.97:0,45,390	1/1:3,30:33:81.22:895,81,0	1/1:14,15:29:42.11:464,42,0	0/1:12,11:25:19.14:247,0,19	1/1:11,0:11:17.08:85,17,0	0/0:21,0:21:44.97:0,45,391	0/0:26,1:27:59.96:0,60,520	1/1:3,19:22:45.12:495,45,0	0/0:18,1:19:11.79:0,12,331	0/0:16,0:16:38.97:0,39,338	1/1:15,0:14:22.79:114,23,0	0/1:5,8:13:5:178,0,5	1/1:10,15:25:42.07:450,42,0	1/1:4,16:20:19.09:439,19,0	1/1:19,0:19:31.27:155,31,0	1/1:19,0:19:22.63:111,23,0	1/1:19,0:19:31.35:157,31,0	1/1:6,23:29:11.05:578,11,0	1/1:11,10:21:24.02:252,24,0	1/1:8,23:31:66.18:727,66,0	1/1:0,10:10:18.05:199,18,0
chr10	58292257	.	G	GGGT	3602.58	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-5.215;DP=570;FS=7.078;HRun=0;HaplotypeScore=107.4797;InbreedingCoeff=0.9934;MQ=85.51;MQ0=0;MQRankSum=-3.204;QD=33.99;ReadPosRankSum=0.377;VQSLOD=3.8962;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:84.03:0,84,779	0/0:12,0:12:33.04:0,33,450	0/0:24,0:24:51.54:0,52,736	0/0:25,0:27:30.99:0,31,675	0/0:43,0:43:99:0,120,1088	1/1:0,12:14:15.01:277,15,0	1/1:0,14:14:32.98:622,33,0	0/0:28,0:28:72.16:0,72,959	0/0:32,0:32:71.15:0,71,268	0/0:18,0:18:33.13:0,33,177	0/0:18,0:18:31.89:0,32,245	1/1:0,12:13:18.06:373,18,0	0/0:18,0:18:54.05:0,54,791	0/0:22,0:22:63.02:0,63,958	0/0:21,0:21:33.94:0,34,142	0/0:16,0:16:47.58:0,48,704	0/0:15,0:15:42.14:0,42,674	1/1:0,10:11:24.08:497,24,0	0/0:13,0:13:27.23:0,27,183	0/0:20,0:20:30.47:0,30,178	0/0:23,0:23:46.02:0,46,244	1/1:1,14:17:35.69:693,36,0	1/1:0,14:15:24.06:498,24,0	1/1:1,17:21:33.10:642,33,0	0/0:26,0:26:49.83:0,50,268	0/0:14,0:14:34.87:0,35,200	0/0:28,0:28:55.82:0,56,244	0/0:11,0:11:20.94:0,21,95
chr10	58293020	.	G	GACACACAC	12044.91	PASS	AC=46;AF=0.852;AN=54;BaseQRankSum=3.674;DP=490;FS=16.414;HRun=0;HaplotypeScore=180.7000;InbreedingCoeff=0.7003;MQ=46.00;MQ0=2;MQRankSum=-4.696;QD=27.69;ReadPosRankSum=-0.627;VQSLOD=3.5627;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:19:2.44:138,2,0	1/1:6,0:6:9.03:305,9,0	0/0:16,0:8:12.02:0,12,126	0/0:9,0:5:6.02:0,6,108	1/1:24,0:29:21.02:536,21,0	1/1:13,0:13:6.02:177,6,0	1/1:22,0:21:10.79:213,11,0	1/1:15,0:14:10.81:82,11,0	1/1:10,6:17:24.08:848,24,0	1/1:18,2:20:31.81:725,32,0	1/1:18,6:24:27.08:902,27,0	1/1:17,0:19:17.93:557,18,0	0/0:10,0:10:12.04:0,12,264	0/0:9,0:9:9.03:0,9,232	1/1:15,7:21:24.08:912,24,0	1/1:21,1:22:38.79:502,39,0	1/1:14,0:14:15.03:314,15,0	1/1:14,1:15:5.99:144,6,0	1/1:8,2:10:12.04:420,12,0	1/1:18,8:28:27.09:1006,27,0	./.	1/1:22,1:23:24.07:628,24,0	1/1:17,1:19:9.03:303,9,0	1/1:16,1:17:3.01:123,3,0	1/1:18,7:26:30.10:1112,30,0	1/1:17,4:22:36.11:884,36,0	1/1:16,7:24:30.10:1091,30,0	1/1:3,1:4:3.48:123,3,0
chr10	58293049	.	ATATATATATATAT	A	478.59	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=-4.406;DP=365;FS=0.000;HRun=0;HaplotypeScore=187.9527;InbreedingCoeff=0.0041;MQ=49.03;MQ0=10;MQRankSum=-0.345;QD=3.28;ReadPosRankSum=-1.577;VQSLOD=2.4669;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:5:3.01:0,3,42	0/0:5,0:5:9.03:0,9,199	0/0:3,0:3:6.02:0,6,115	0/0:10,0:4:6.02:0,6,112	0/0:21,0:21:15.05:0,15,488	1/1:4,9:13:3:70,3,0	1/1:6,6:11:2.01:118,2,0	0/0:20,0:18:51.12:0,51,975	0/0:17,0:17:21.07:0,21,465	0/1:15,0:14:99:122,0,383	0/0:23,0:23:21.54:0,22,610	0/1:16,0:16:16.66:17,0,198	0/0:6,0:6:15.03:0,15,700	0/0:8,0:8:24.08:0,24,1452	0/0:22,0:21:21.07:0,21,521	0/1:17,0:15:99:134,0,604	0/0:12,0:12:17.99:0,18,316	0/0:8,0:8:3.01:0,3,64	0/0:7,0:6:15.05:0,15,369	0/1:23,0:22:16.90:17,0,665	0/0:7,0:6:0.47:0,0,2	0/0:16,0:16:8.96:0,9,157	0/0:10,0:10:6.02:0,6,111	0/0:4,0:4:3.01:0,3,79	0/0:13,0:13:26.63:0,27,671	0/1:18,0:14:24.89:25,0,556	0/1:25,0:25:79.93:80,0,616	0/1:7,0:6:34.45:34,0,114
chr10	58293051	.	ATATATATATAT	A	1033.50	PASS	AB=0.915;AC=14;AF=0.250;AN=56;BaseQRankSum=-5.684;DP=376;FS=0.755;HRun=0;HaplotypeScore=178.7880;InbreedingCoeff=-0.1153;MQ=48.89;MQ0=12;MQRankSum=2.541;QD=5.41;ReadPosRankSum=-1.640;VQSLOD=2.3716;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:5:2.80:0,3,13	0/0:5,0:5:9.03:0,9,138	0/0:3,0:3:6.02:0,6,100	0/0:9,0:4:6.02:0,6,112	0/0:21,0:21:14.97:0,15,346	1/1:12,1:13:3:52,3,0	1/1:12,0:11:2.01:101,2,0	0/0:22,0:19:50.76:0,51,673	0/0:19,0:18:20.65:0,21,270	0/1:16,0:15:99:281,0,207	0/0:24,0:24:21.07:0,21,411	0/1:6,10:16:52.24:52,0,66	0/0:4,0:4:12.04:0,12,575	0/0:8,0:8:24.08:0,24,1255	0/0:23,0:21:21.07:0,21,319	0/1:16,1:15:99:173,0,207	0/0:12,0:12:11.95:0,12,169	0/0:2,6:8:3.01:0,3,43	0/1:9,0:8:46.42:46,0,225	0/1:24,0:22:41.88:42,0,444	0/0:7,0:6:0.89:0,1,2	0/1:5,11:16:3.79:4,0,58	0/0:6,3:9:5.93:0,6,41	0/0:4,0:4:3.01:0,3,47	0/1:15,0:14:45.93:46,0,384	0/1:19,0:14:99:196,0,303	0/1:27,0:27:99:113,0,376	0/1:7,0:6:60.70:72,0,61
chr10	58293053	.	ATATATATAT	A	1805.43	PASS	AB=0.912;AC=18;AF=0.321;AN=56;BaseQRankSum=-3.994;DP=382;FS=0.648;HRun=0;HaplotypeScore=169.7668;InbreedingCoeff=-0.0412;MQ=49.46;MQ0=14;MQRankSum=1.607;QD=8.06;ReadPosRankSum=1.638;VQSLOD=2.4468;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:6,0:4:3:32,3,0	0/0:6,0:6:8.70:0,9,118	0/0:2,0:2:6.02:0,6,86	0/0:9,0:4:7.27:0,7,115	0/1:20,1:21:12.64:13,0,178	1/1:13,0:13:3:34,3,0	1/1:11,0:10:2.03:84,2,0	0/0:20,0:17:49.48:0,49,561	0/0:10,8:17:9.29:0,9,53	0/1:8,8:15:52.28:463,0,52	0/0:11,13:24:18.79:0,19,177	0/1:16,0:16:12.17:58,0,12	0/0:5,0:5:15.05:0,15,513	0/0:10,0:10:30.10:0,30,1127	0/0:24,0:22:10.04:0,10,73	0/1:19,0:17:99:161,0,115	0/0:11,0:11:9.83:0,10,125	0/0:9,0:7:3:0,3,28	0/1:10,0:9:93.91:94,0,113	0/1:21,3:23:99:101,0,173	0/0:5,2:6:0.47:0,0,2	0/1:16,0:16:17.32:17,0,42	0/0:8,1:9:4.59:0,5,15	0/0:4,0:4:3.01:0,3,37	0/1:15,0:14:85.69:91,0,86	0/1:23,0:18:91.32:523,0,91	0/1:10,17:27:76.37:166,0,76	1/1:3,4:6:6.10:124,6,0
chr10	58293054	.	TATA	T	167.21	PASS	AB=0.943;AC=10;AF=0.179;AN=56;BaseQRankSum=-3.922;DP=380;FS=3.759;HRun=0;HaplotypeScore=151.2651;InbreedingCoeff=0.1662;MQ=49.61;MQ0=17;MQRankSum=0.025;QD=1.39;ReadPosRankSum=1.045;VQSLOD=2.3271;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:4:2.92:0,3,17	0/1:5,1:6:7.94:49,0,8	0/0:2,0:2:6.02:0,6,83	0/0:9,0:4:8.72:0,9,74	0/0:21,0:21:15:0,15,214	0/0:13,0:13:3:0,3,29	1/1:11,0:10:2.98:21,3,0	0/1:15,5:17:70.04:79,0,70	0/0:18,0:17:21.07:0,21,359	0/1:17,0:15:33.12:33,0,214	0/0:23,0:23:21.04:0,21,324	0/0:16,0:16:14.92:0,15,222	0/0:5,0:5:15.05:0,15,269	0/0:10,0:10:30.08:0,30,577	0/0:23,0:22:21:0,21,320	0/1:20,0:18:2.58:3,0,537	1/1:10,2:12:6.47:102,6,0	0/0:9,0:7:3:0,3,28	0/0:8,0:7:21.07:0,21,293	0/0:23,0:22:13.44:0,13,385	0/1:6,0:5:0.06:0,0,0	0/0:16,0:16:8.86:0,9,115	0/0:9,0:9:6.02:0,6,108	0/0:4,0:4:3.01:0,3,52	0/0:15,0:14:26.88:0,27,410	0/0:23,0:18:5.58:0,6,479	0/1:28,0:26:6.45:6,0,418	0/0:7,0:6:9.46:0,9,110
chr10	58293055	.	ATATATAT	A	1978.88	PASS	AB=0.971;AC=24;AF=0.429;AN=56;BaseQRankSum=1.498;DP=382;FS=0.000;HRun=0;HaplotypeScore=159.8288;InbreedingCoeff=-0.0989;MQ=49.46;MQ0=20;MQRankSum=-3.197;QD=6.87;ReadPosRankSum=4.727;VQSLOD=1.9830;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:6,0:4:3.01:56,3,0	0/0:6,0:6:8.69:0,9,102	0/0:2,0:2:6.02:0,6,90	0/0:9,0:4:6.96:0,7,116	0/1:10,11:21:47.84:48,0,78	1/1:13,0:13:3:34,3,0	1/1:11,0:10:2.16:68,2,0	0/0:20,0:17:44.46:0,44,455	0/1:18,0:17:10.68:21,0,11	0/1:17,0:15:23.66:443,0,24	0/0:22,0:22:0.04:0,0,96	1/1:16,0:16:5.35:64,5,0	0/0:5,0:5:15.05:0,15,414	0/0:10,0:10:30.10:0,30,926	0/1:23,0:22:19.21:35,0,19	0/1:20,0:18:48.38:186,0,48	0/1:12,0:12:0.15:0,0,104	0/0:10,0:7:2.98:0,3,21	0/1:9,0:7:69.58:109,0,70	0/1:23,0:22:93.11:97,0,93	0/0:6,0:5:0.47:0,0,2	0/1:16,0:16:26.07:36,0,26	1/1:9,0:9:1.76:5,2,0	0/0:4,0:4:3:0,3,28	0/1:15,0:14:45.14:154,0,45	0/1:24,0:18:41.99:493,0,42	0/1:28,0:26:22.05:176,0,22	1/1:7,0:6:11.44:110,11,0
chr10	58293057	.	ATATAT	A	2240.76	PASS	AB=0.986;AC=27;AF=0.482;AN=56;BaseQRankSum=1.938;DP=383;FS=0.000;HRun=0;HaplotypeScore=151.4771;InbreedingCoeff=0.0559;MQ=54.33;MQ0=20;MQRankSum=-2.073;QD=7.28;ReadPosRankSum=5.598;VQSLOD=2.2751;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:5,0:3:3.01:54,3,0	0/0:6,0:6:8.63:0,9,87	0/0:3,0:3:6.02:0,6,81	0/0:11,0:6:9.50:0,9,133	0/1:21,0:21:44.67:45,0,45	1/1:13,0:13:3:34,3,0	1/1:11,0:10:2.14:51,2,0	0/0:19,0:17:34.20:0,34,373	1/1:18,0:17:3.08:69,3,0	0/1:15,1:15:2.33:391,0,2	0/1:22,0:22:29.60:30,0,56	1/1:16,0:16:12.86:98,13,0	0/0:5,0:5:15.05:0,15,335	0/0:10,0:10:30.10:0,30,724	1/1:9,14:22:0.62:84,1,0	0/1:17,2:18:4.52:184,0,5	0/1:12,0:12:5.78:6,0,76	0/0:10,0:7:2.88:0,3,15	0/1:9,0:7:37.18:133,0,37	0/1:24,0:23:48.29:151,0,48	0/0:5,1:5:0.47:0,0,2	0/1:16,0:16:12.58:44,0,13	1/1:9,0:9:5.54:25,6,0	0/0:1,3:4:2.96:0,3,19	0/1:15,0:14:18.20:219,0,18	0/1:24,0:18:11.09:457,0,11	0/1:28,0:26:1.12:211,0,1	1/1:7,0:6:11.97:116,12,0
chr10	58293061	.	AT	A	2723.69	PASS	AC=36;AF=0.667;AN=54;BaseQRankSum=5.362;DP=395;FS=2.121;HRun=5;HaplotypeScore=139.0092;InbreedingCoeff=0.7498;MQ=62.50;MQ0=21;MQRankSum=-4.711;QD=9.23;ReadPosRankSum=3.332;VQSLOD=0.5176;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,5:3:3:27,3,0	0/0:7,0:7:9.08:0,9,82	0/0:8,0:8:18.03:0,18,192	0/0:11,0:7:9.48:0,9,95	1/1:15,5:20:2.49:26,2,0	1/1:10,3:13:3:34,3,0	1/1:7,4:10:2.27:19,2,0	0/0:25,0:22:53.85:0,54,428	1/1:10,7:16:17.63:189,18,0	1/1:12,3:14:29.82:280,30,0	1/1:15,7:22:8.77:96,9,0	1/1:10,6:16:14.95:147,15,0	0/0:5,0:5:15.05:0,15,197	0/0:11,0:11:30:0,30,363	1/1:16,7:22:17.98:180,18,0	1/1:18,2:19:28.35:228,28,0	0/0:13,0:13:17.49:0,17,113	./.	1/1:2,7:7:20.89:213,21,0	1/1:11,11:22:23.92:244,24,0	0/0:6,0:5:0.47:0,0,1	1/1:12,4:16:5.95:53,6,0	1/1:5,5:9:6.01:64,6,0	0/0:4,0:4:0.47:0,0,1	1/1:2,14:15:23.55:248,24,0	1/1:6,18:18:44.80:452,45,0	1/1:20,8:26:26.56:274,27,0	1/1:5,2:6:12.03:132,12,0
chr10	58293062	.	T	TA	3014.22	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=6.685;DP=398;FS=5.054;HRun=1;HaplotypeScore=137.3137;InbreedingCoeff=0.7661;MQ=63.91;MQ0=21;MQRankSum=-2.944;QD=9.69;ReadPosRankSum=0.875;VQSLOD=1.4004;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,0:4:1.81:5,2,0	0/0:7,0:7:9.16:0,9,95	0/0:8,0:8:17.32:0,17,177	0/0:12,0:8:9.48:0,9,94	1/1:20,0:20:8.25:31,8,0	1/1:13,0:13:3:34,3,0	1/1:10,1:10:0.61:2,1,0	0/0:25,0:22:55.83:0,56,529	1/1:17,1:17:20.43:249,20,0	1/1:14,1:14:28.63:198,29,0	1/1:22,0:22:18.75:145,19,0	1/1:17,0:17:14.77:162,15,0	0/0:5,0:5:15.05:0,15,199	0/0:11,0:11:32.92:0,33,394	1/1:22,1:22:20.42:228,20,0	1/1:6,14:19:32.53:445,33,0	0/0:14,0:14:18.81:0,19,159	1/1:10,0:7:2.22:7,2,0	1/1:8,0:7:20.78:209,21,0	1/1:22,0:21:32.05:277,32,0	0/0:5,0:4:0.47:0,0,1	1/1:16,0:16:8.59:63,9,0	1/1:10,1:10:6.01:84,6,0	1/1:4,0:4:2.49:9,2,0	1/1:15,1:15:29.53:280,30,0	1/1:20,3:17:42.44:360,42,0	1/1:26,2:26:29.77:290,30,0	1/1:6,1:6:11.90:122,12,0
chr10	58294783	.	T	TA	2629.16	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-7.480;DP=734;FS=22.075;HRun=2;HaplotypeScore=74.1401;InbreedingCoeff=0.9983;MQ=69.37;MQ0=1;MQRankSum=0.399;QD=34.14;ReadPosRankSum=-2.496;VQSLOD=1.3892;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,120,1457	1/1:0,8:8:21.07:302,21,0	0/0:25,0:21:54.24:0,54,586	0/0:24,0:21:53.91:0,54,642	0/0:32,0:32:93.22:0,93,1120	0/0:26,0:26:75.19:0,75,891	0/0:27,0:27:75.17:0,75,877	1/1:3,32:35:96.27:1308,96,0	0/0:19,0:19:57.17:0,57,695	0/0:30,0:30:81.24:0,81,983	0/0:21,0:21:63.10:0,63,722	0/0:16,0:16:48.14:0,48,582	0/0:33,0:33:99:0,99,1215	0/0:16,0:16:48.15:0,48,593	0/0:28,0:28:81.24:0,81,982	0/0:20,0:20:57.14:0,57,669	1/1:1,33:34:81.27:1161,81,0	0/0:13,0:13:39.12:0,39,483	0/0:29,0:29:87.25:0,87,1046	0/0:28,0:28:81.20:0,81,971	0/0:38,0:38:99:0,114,1366	0/0:40,0:40:99:0,114,1339	0/0:20,0:20:57.17:0,57,696	0/0:36,0:36:99:0,105,1287	0/0:29,0:29:78.15:0,78,918	0/0:30,0:30:87.19:0,87,1016	0/0:27,0:27:78.22:0,78,943	0/0:10,0:10:30.09:0,30,371
chr10	58295230	.	GT	G	14406.17	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=14.733;DP=640;FS=1.234;HRun=5;HaplotypeScore=141.7171;InbreedingCoeff=0.9864;MQ=86.82;MQ0=0;MQRankSum=-6.185;QD=28.30;ReadPosRankSum=5.512;VQSLOD=2.8360;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,35:40:96.23:1072,96,0	0/0:5,0:5:15.05:0,15,205	0/0:32,0:32:81.21:0,81,1011	0/0:12,0:13:28.41:0,28,390	1/1:7,15:22:36.10:408,36,0	1/1:1,27:28:75.21:850,75,0	1/1:3,24:27:60.17:680,60,0	0/0:20,0:20:51.16:0,51,685	1/1:0,16:16:48.14:544,48,0	1/1:4,33:37:99:1121,99,0	1/1:12,20:32:51.12:576,51,0	1/1:0,13:13:39.11:442,39,0	0/0:21,0:21:60.15:0,60,780	0/0:19,0:19:51.16:0,51,679	1/1:1,26:27:72.20:815,72,0	1/1:0,21:21:60.17:679,60,0	0/0:21,0:21:57.18:0,57,763	1/1:2,17:19:51.14:578,51,0	1/1:5,15:20:48.10:522,48,0	1/1:3,23:26:66.18:748,66,0	1/1:1,16:17:45.13:510,45,0	1/1:8,16:24:45.13:510,45,0	1/1:4,16:20:48.13:542,48,0	1/1:2,27:29:81.23:919,81,0	1/1:0,20:20:57.16:646,57,0	1/1:2,21:23:63.18:714,63,0	1/1:1,43:44:99:1428,126,0	1/1:0,4:4:9.03:102,9,0
chr10	58297753	.	A	AC	21985.58	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=5.222;DP=673;FS=5.256;HRun=2;HaplotypeScore=92.2936;InbreedingCoeff=0.9981;MQ=71.60;MQ0=0;MQRankSum=-5.354;QD=39.90;ReadPosRankSum=4.285;VQSLOD=4.7781;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,39:41:99:1642,114,0	1/1:0,7:7:21.07:302,21,0	0/0:27,0:27:66.17:0,66,803	0/0:29,0:30:65.66:0,66,964	1/1:1,21:22:63.21:907,63,0	1/1:2,23:25:66.22:950,66,0	1/1:1,15:16:42.14:605,42,0	1/1:1,26:27:75.19:1019,75,0	1/1:0,23:23:66.22:951,66,0	1/1:3,22:25:66.22:946,66,0	1/1:0,14:14:42.14:605,42,0	1/1:2,19:21:57.19:821,57,0	0/0:37,0:37:99:0,108,1311	0/0:28,0:28:81.25:0,81,1003	1/1:0,33:33:90.30:1296,90,0	1/1:1,20:21:57.19:821,57,0	1/1:0,34:34:99:1468,102,0	1/1:0,24:24:72.24:1037,72,0	1/1:2,19:21:54.18:777,54,0	1/1:2,20:22:60.20:864,60,0	1/1:0,35:35:99:1469,102,0	1/1:0,19:19:48.16:690,48,0	1/1:0,12:12:30.10:432,30,0	1/1:1,25:26:72.24:1037,72,0	1/1:0,25:25:75.25:1079,75,0	1/1:1,21:22:63.19:887,63,0	1/1:0,26:25:72.24:1036,72,0	1/1:1,9:10:24.08:346,24,0
chr10	58298170	.	GGAGAGGGTGAGCAGGGTAAAGGTGCAGGGGGAA	G	8681.45	PASS	AB=0.937;AC=39;AF=0.696;AN=56;BaseQRankSum=-4.535;DP=506;FS=2.807;HRun=0;HaplotypeScore=331.1538;InbreedingCoeff=0.4506;MQ=59.02;MQ0=24;MQRankSum=2.755;QD=24.18;ReadPosRankSum=-0.455;VQSLOD=3.0541;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:20:39.12:909,39,0	0/0:9,0:9:14.88:0,15,235	0/1:32,0:17:17.20:17,0,237	0/0:25,0:16:35.24:0,35,502	0/1:7,6:11:60.78:86,0,61	1/1:3,0:2:3.01:95,3,0	1/1:21,0:18:19.80:395,20,0	0/0:28,0:17:26.97:0,27,388	1/1:20,0:19:0.63:561,1,0	1/1:14,0:13:17.41:231,17,0	0/1:7,0:7:17.82:249,0,18	1/1:17,0:16:30.10:690,30,0	0/0:20,0:20:48.16:0,48,1524	0/0:43,0:43:99:0,102,3081	1/1:20,0:19:18.05:346,18,0	0/1:10,0:10:41.94:224,0,42	0/0:22,0:22:54.08:0,54,1163	1/1:18,0:15:24.08:532,24,0	1/1:14,0:9:6.02:111,6,0	0/1:9,0:9:10.67:191,0,11	1/1:46,0:34:48.53:1223,49,0	1/1:9,0:9:6.01:72,6,0	1/1:11,0:11:3.01:50,3,0	1/1:31,0:29:28.67:1337,29,0	1/1:17,0:16:13.82:663,14,0	1/1:5,8:11:24.03:439,24,0	1/1:8,0:8:8.52:148,9,0	1/1:2,0:2:6.02:113,6,0
chr10	58298194	.	GCAGGGGGAAGAGAGGGTGAGCAGGGTGAGGGTA	G	1146.16	PASS	AB=0.973;AC=24;AF=0.429;AN=56;BaseQRankSum=6.190;DP=449;FS=13.729;HRun=0;HaplotypeScore=315.6181;InbreedingCoeff=-0.2762;MQ=63.69;MQ0=29;MQRankSum=-0.338;QD=3.86;ReadPosRankSum=4.711;VQSLOD=1.1222;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:16,0:14:5.75:107,0,6	0/1:6,0:6:70.42:111,0,70	0/0:35,0:22:56.63:0,57,818	0/0:29,0:24:44.49:0,44,541	1/1:7,5:10:5.26:128,5,0	1/1:4,0:3:4.66:40,5,0	0/0:21,0:17:11.72:0,12,76	0/1:24,0:13:50.76:51,0,102	1/1:15,0:12:9.36:93,9,0	0/1:6,0:6:13.32:13,0,23	0/1:7,0:7:13.61:72,0,14	0/1:16,0:13:33.91:87,0,34	0/0:20,0:20:54.15:0,54,1709	0/0:43,0:43:99:0,115,3456	0/1:13,0:11:14.01:14,0,26	0/1:6,0:6:16.01:34,0,16	0/1:22,0:21:32.96:33,0,685	0/1:14,0:11:24.97:25,0,37	0/1:12,0:3:2.04:2,0,34	0/1:9,0:8:19.95:20,0,70	0/1:47,0:31:81.02:81,0,172	0/0:2,0:2:5.78:0,6,31	0/1:1,11:12:0:0,0,0	0/1:29,0:25:45.77:240,0,46	0/1:11,0:11:47.62:105,0,48	0/1:10,0:8:9.41:38,0,9	0/1:6,0:6:11.40:11,0,15	0/0:2,0:2:5.25:0,5,23
chr10	58298196	.	AG	A	3226.07	PASS	AB=0.666;AC=23;AF=0.411;AN=56;BaseQRankSum=4.366;DP=442;FS=5.494;HRun=5;HaplotypeScore=90.7701;InbreedingCoeff=-0.1737;MQ=64.37;MQ0=24;MQRankSum=-0.079;QD=12.80;ReadPosRankSum=4.478;VQSLOD=1.9090;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:8,8:14:69.78:239,0,70	0/0:6,0:6:18.05:0,18,222	0/0:34,0:23:66.15:0,66,818	0/0:27,0:22:54.29:0,54,664	0/1:12,0:10:32.86:55,0,33	0/1:3,1:3:25:25,0,71	0/1:3,18:17:12.45:245,0,12	0/0:20,0:12:33.05:0,33,398	0/1:6,9:12:37.67:211,0,38	1/1:4,2:6:6.90:70,7,0	0/1:2,4:6:59.70:118,0,60	0/1:3,13:13:22.67:333,0,23	0/0:21,0:21:57.18:0,57,763	0/0:45,0:45:99:0,129,1715	0/1:5,8:11:17.73:183,0,18	0/1:2,4:6:23.65:121,0,24	0/0:23,0:22:57.14:0,57,719	0/1:5,9:11:18.70:242,0,19	1/1:7,3:3:9.03:102,9,0	0/1:5,4:8:24.24:115,0,24	0/1:18,29:31:99:594,0,206	1/1:0,2:2:6.02:68,6,0	0/0:12,0:12:3:0,3,25	0/1:14,14:24:99:289,0,226	0/1:7,4:11:99:140,0,167	1/1:10,0:8:18.85:160,19,0	0/1:3,3:6:25.38:90,0,25	0/0:2,0:2:6:0,6,52
chr10	58298491	.	C	CA	9148.22	PASS	AB=0.695;AC=43;AF=0.768;AN=56;BaseQRankSum=11.410;DP=448;FS=2.486;HRun=1;HaplotypeScore=96.9132;InbreedingCoeff=0.5919;MQ=67.80;MQ0=2;MQRankSum=-0.041;QD=27.55;ReadPosRankSum=2.369;VQSLOD=4.8764;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,18:23:58.57:828,59,0	0/1:7,2:9:23.37:23,0,213	0/0:21,0:21:17.58:0,18,528	0/0:19,0:19:37.60:0,38,434	1/1:0,3:4:6.02:89,6,0	1/1:2,7:8:15.04:204,15,0	1/1:2,14:15:27.04:366,27,0	0/0:11,0:8:15.05:0,15,208	1/1:1,19:20:51.17:767,51,0	1/1:1,6:7:7.87:253,8,0	1/1:0,3:3:2.90:44,3,0	1/1:1,21:22:54.18:790,54,0	0/0:27,0:26:74.82:0,75,975	0/0:35,0:35:96.19:0,96,1262	1/1:0,10:10:24.08:354,24,0	1/1:0,19:17:24.08:355,24,0	0/1:22,12:34:99:411,0,584	0/1:2,18:20:15.09:442,0,15	1/1:1,3:3:9.02:120,9,0	1/1:1,4:5:6.02:88,6,0	1/1:7,32:37:84.16:1157,84,0	1/1:1,4:5:12.04:178,12,0	1/1:0,8:8:21.07:313,21,0	1/1:0,42:42:90.30:1326,90,0	1/1:0,6:6:9.03:133,9,0	1/1:0,9:10:29.97:377,30,0	1/1:0,14:14:27.09:397,27,0	1/1:0,3:3:9.03:131,9,0
chr10	58298554	.	G	GA	499.98	PASS	AB=0.963;AC=12;AF=0.214;AN=56;BaseQRankSum=-2.334;DP=599;FS=3.596;HRun=0;HaplotypeScore=155.5122;InbreedingCoeff=-0.1889;MQ=57.67;MQ0=10;MQRankSum=-0.435;QD=2.07;ReadPosRankSum=-8.545;VQSLOD=0.2053;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:34,2:34:66.86:67,0,991	1/1:3,1:2:3.01:47,3,0	0/0:29,0:19:0.07:0,0,599	0/0:27,0:14:38.99:0,39,483	0/0:15,0:14:2.11:0,2,302	0/1:10,1:10:42.55:43,0,305	0/1:21,0:18:93.52:94,0,339	0/1:28,1:20:76.34:76,0,455	0/0:27,0:27:31.61:0,32,884	0/0:18,0:17:51.17:0,51,713	0/1:9,0:9:37.02:37,0,228	0/0:28,0:27:4.81:0,5,815	0/0:37,0:37:99:0,102,1385	0/0:32,0:32:90.30:0,90,1252	0/1:12,0:12:14.61:15,0,326	0/0:16,0:16:27.09:0,27,377	0/1:17,2:18:91.75:92,0,195	0/0:17,0:15:31.90:0,32,405	0/1:13,1:13:33.85:34,0,418	0/0:6,0:6:15.05:0,15,209	0/1:66,3:64:99:120,0,1400	0/0:15,0:12:6.09:0,6,268	0/0:16,0:15:39.13:0,39,530	0/0:32,0:32:23.61:0,24,763	0/0:22,0:20:30.06:0,30,606	0/1:18,0:18:21.28:21,0,570	0/0:17,0:17:2.71:0,3,583	0/0:3,0:3:6.02:0,6,84
chr10	58298558	.	AG	A	55.16	PASS	AB=0.755;AC=2;AF=0.036;AN=56;BaseQRankSum=1.625;DP=626;FS=5.399;HRun=5;HaplotypeScore=160.9965;InbreedingCoeff=-0.0454;MQ=59.35;MQ0=9;MQRankSum=-2.989;QD=1.15;ReadPosRankSum=-1.582;VQSLOD=-0.6014;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:36:63.42:0,63,1159	0/0:5,0:3:6:0,6,59	0/0:33,1:25:64.79:0,65,841	0/0:26,0:15:41.56:0,42,482	0/0:15,0:14:33.02:0,33,405	0/0:11,0:10:27.09:0,27,367	0/0:22,0:19:42.10:0,42,553	0/1:22,8:21:96.91:97,0,289	0/0:29,0:29:78.22:0,78,1044	0/0:19,0:18:48.15:0,48,644	0/0:9,0:9:24.07:0,24,305	0/0:29,0:28:75.19:0,75,972	0/0:36,0:36:99:0,99,1286	0/0:33,0:33:87.25:0,87,1128	0/0:15,0:15:42.03:0,42,488	0/0:17,0:17:36.07:0,36,456	0/1:11,7:17:46.94:47,0,160	0/0:18,0:16:33.11:0,33,451	0/0:17,0:16:45.15:0,45,603	0/0:7,0:7:17.98:0,18,205	0/0:70,1:66:99:0,139,1910	0/0:16,0:13:21.06:0,21,271	0/0:17,0:16:39.13:0,39,530	0/0:32,1:33:64.90:0,65,900	0/0:22,0:20:51.17:0,51,695	0/0:19,0:19:57.18:0,57,765	0/0:17,0:17:45.15:0,45,615	0/0:3,0:3:6.02:0,6,82
chr10	58298593	.	GA	G	5386.56	PASS	AB=0.685;AC=21;AF=0.375;AN=56;BaseQRankSum=11.967;DP=526;FS=16.268;HRun=1;HaplotypeScore=110.9579;InbreedingCoeff=-0.6052;MQ=71.38;MQ0=6;MQRankSum=-0.271;QD=15.13;ReadPosRankSum=-1.434;VQSLOD=3.2998;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:10,15:23:99:514,0,308	0/0:4,0:4:9.03:0,9,134	0/0:31,0:27:66.78:0,67,847	0/0:35,0:31:70.08:0,70,1223	0/1:4,8:12:99:214,0,134	0/1:4,4:8:99:143,0,167	0/1:18,4:21:91.33:91,0,694	0/0:20,0:18:51.15:0,51,784	0/1:7,13:20:99:505,0,172	0/1:8,9:16:99:287,0,240	0/1:4,4:8:99:143,0,166	0/1:11,11:21:99:316,0,448	0/0:33,0:33:96.30:0,96,1474	0/0:27,0:27:78.27:0,78,1223	0/1:15,4:19:99:134,0,589	0/1:4,5:9:74.84:188,0,75	0/0:20,0:19:25.11:0,25,573	0/1:5,7:12:99:257,0,154	0/1:19,4:23:99:101,0,768	0/1:6,2:8:80.36:80,0,171	0/1:31,26:53:99:761,0,694	0/1:6,6:11:99:135,0,203	0/1:6,7:12:99:212,0,205	0/1:8,12:20:99:386,0,146	0/1:5,7:11:99:251,0,158	0/1:10,7:17:99:264,0,380	0/1:6,9:15:99:335,0,197	0/1:3,2:5:68.43:68,0,129
chr10	58299314	.	TAC	T	9909.81	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=10.230;DP=613;FS=1.479;HRun=0;HaplotypeScore=85.8927;InbreedingCoeff=0.9831;MQ=68.23;MQ0=3;MQRankSum=-2.034;QD=32.71;ReadPosRankSum=3.073;VQSLOD=6.8115;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,41:46:87.29:1195,87,0	0/0:6,0:6:12.04:0,12,213	0/0:35,0:31:48.05:0,48,1117	0/0:31,0:24:48.16:0,48,836	1/1:1,15:16:42.11:577,42,0	0/0:17,0:17:42.14:0,42,729	0/0:20,0:20:48.16:0,48,835	0/0:26,0:26:66.23:0,66,1166	1/1:1,16:17:39.13:535,39,0	1/1:1,20:21:60.20:824,60,0	1/1:0,7:7:12.04:165,12,0	0/0:25,0:25:69.24:0,69,1214	0/0:18,0:18:48.16:0,48,851	0/0:24,0:24:60.20:0,60,1036	1/1:2,21:23:54.18:742,54,0	1/1:0,21:21:57.19:783,57,0	0/0:32,0:32:63.22:0,63,1117	0/0:23,0:23:60.21:0,60,1065	1/1:1,19:20:54.14:720,54,0	1/1:0,16:16:45.15:618,45,0	1/1:4,30:34:78.26:1072,78,0	0/0:12,0:12:27.09:0,27,479	0/0:8,0:8:24.08:0,24,426	0/0:32,0:32:81.28:0,81,1437	1/1:1,12:13:30.10:412,30,0	1/1:2,25:27:72.24:989,72,0	1/1:3,32:34:84.28:1153,84,0	1/1:3,3:6:9.03:124,9,0
chr10	58302333	.	AACAC	A	8192.56	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=2.260;DP=326;FS=127.490;HRun=0;HaplotypeScore=112.8463;InbreedingCoeff=0.8515;MQ=64.20;MQ0=0;MQRankSum=-6.817;QD=33.71;ReadPosRankSum=1.222;VQSLOD=1.8553;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,8:15:24:348,24,0	1/1:0,2:2:6.02:103,6,0	0/0:27,0:22:43.43:0,43,886	0/0:23,0:21:36.06:0,36,711	1/1:2,11:13:27.09:434,27,0	1/1:1,11:12:27.09:463,27,0	1/1:2,4:6:12.04:181,12,0	1/1:10,11:21:36.11:593,36,0	1/1:1,2:3:9.03:137,9,0	1/1:2,11:13:30.10:514,30,0	1/1:3,4:7:12.04:206,12,0	1/1:2,3:5:9.03:154,9,0	0/0:11,0:11:27.09:0,27,675	0/0:22,0:22:60.21:0,60,1492	1/1:9,10:19:36.12:583,36,0	1/1:0,4:4:12.04:206,12,0	1/1:2,7:9:18.06:308,18,0	1/1:1,2:3:6.02:103,6,0	1/1:6,9:15:27.09:453,27,0	1/1:2,11:13:36.12:604,36,0	1/1:2,4:6:9.03:154,9,0	1/1:2,6:8:18.06:308,18,0	1/1:1,8:9:21.07:360,21,0	1/1:2,4:6:9.03:154,9,0	1/1:8,8:15:27.09:452,27,0	1/1:5,12:17:39.13:668,39,0	1/1:4,9:13:30.10:506,30,0	1/1:5,3:8:12.04:199,12,0
chr10	58302421	.	TA	T	6346.81	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=6.413;DP=514;FS=7.513;HRun=6;HaplotypeScore=65.6700;InbreedingCoeff=0.9882;MQ=61.13;MQ0=0;MQRankSum=-0.037;QD=29.80;ReadPosRankSum=2.462;VQSLOD=5.5627;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:78.21:0,78,1005	0/0:3,0:3:9.03:0,9,118	0/0:8,0:8:24.01:0,24,286	0/0:9,0:9:20.43:0,20,232	0/0:20,0:20:42.14:0,42,552	0/0:26,0:26:69.15:0,69,869	0/0:18,0:18:45.06:0,45,552	0/0:40,0:40:99:0,111,1432	1/1:0,10:10:30.08:322,30,0	1/1:2,21:23:60.15:645,60,0	1/1:0,20:20:60.15:644,60,0	0/0:14,0:14:42.09:0,42,533	0/0:12,0:12:33.11:0,33,434	0/0:17,0:17:48.14:0,48,617	1/1:5,21:26:63.15:676,63,0	0/0:14,0:14:39.08:0,39,480	0/0:19,0:19:51.17:0,51,670	0/0:25,0:25:69.12:0,69,884	1/1:0,21:21:63.16:677,63,0	1/1:1,20:21:54.13:580,54,0	1/1:0,11:11:33.08:354,33,0	0/0:15,0:15:39.08:0,39,493	0/0:17,0:17:39.13:0,39,512	0/0:14,0:14:36.07:0,36,454	1/1:0,19:19:57.14:612,57,0	1/1:3,30:33:87.22:935,87,0	1/1:1,23:24:69.17:741,69,0	1/1:0,5:5:15.04:161,15,0
chr10	58303165	.	TTATC	T	492.05	PASS	AB=0.896;AC=4;AF=0.074;AN=54;BaseQRankSum=2.722;DP=652;FS=5.104;HRun=0;HaplotypeScore=172.7600;InbreedingCoeff=0.4225;MQ=62.01;MQ0=7;MQRankSum=-0.093;QD=6.47;ReadPosRankSum=0.534;VQSLOD=2.0566;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:19,5:26:5.98:214,0,6	0/0:5,0:5:9.03:0,9,211	0/0:23,0:14:3.01:0,3,48	./.	1/1:17,13:30:24.08:374,24,0	0/0:15,0:14:30.10:0,30,680	0/0:14,0:14:18.06:0,18,399	0/0:44,0:43:56.91:0,57,874	0/0:22,0:22:39.12:0,39,847	0/0:33,0:32:54.18:0,54,1210	0/0:22,0:22:36.11:0,36,757	0/0:22,0:22:57.20:0,57,1350	0/0:17,0:17:36.10:0,36,782	0/0:15,0:15:27.09:0,27,639	0/0:25,0:25:34.08:0,34,802	0/0:14,0:25:27.07:0,27,356	0/0:25,0:25:48.12:0,48,1068	0/0:25,0:27:51.01:0,51,1007	0/1:19,1:20:17.04:17,0,611	0/0:30,1:31:3.23:0,3,991	0/0:24,0:24:54.19:0,54,1259	0/0:15,0:15:27.09:0,27,614	0/0:26,0:26:54.19:0,54,1274	0/0:8,0:11:12.02:0,12,247	0/0:25,0:24:45.13:0,45,931	0/0:39,0:39:66.22:0,66,1498	0/0:29,0:29:80.30:0,80,1790	0/0:25,0:25:27.04:0,27,588
chr10	58303290	.	CTAGCCATT	C	264.36	PASS	AB=0.967;AC=5;AF=0.093;AN=54;BaseQRankSum=5.326;DP=533;FS=1.454;HRun=0;HaplotypeScore=201.7088;InbreedingCoeff=0.6439;MQ=62.37;MQ0=1;MQRankSum=-4.403;QD=6.45;ReadPosRankSum=-2.522;VQSLOD=2.5096;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:28,1:29:22.90:23,0,2222	1/1:0,2:2:6.02:170,6,0	0/0:11,0:10:27.09:0,27,1003	0/0:7,0:7:12.04:0,12,509	0/0:23,0:23:69.16:0,69,2625	0/0:20,0:19:54.19:0,54,2320	0/0:12,0:12:36.11:0,36,1340	./.	0/0:24,0:24:72.25:0,72,2907	0/0:30,0:30:84.29:0,84,3403	0/0:27,0:27:74.99:0,75,2294	0/0:14,0:14:42.14:0,42,1761	0/0:27,0:27:81.28:0,81,3266	0/0:14,0:14:42.13:0,42,1667	0/0:27,0:27:78.27:0,78,3164	0/0:32,0:32:84.29:0,84,3602	1/1:4,6:9:4.90:181,5,0	0/0:19,0:19:43.47:0,43,1895	0/0:11,0:11:33.11:0,33,1410	0/0:26,0:26:72.20:0,72,2909	0/0:16,0:16:45.10:0,45,1610	0/0:16,0:16:48.08:0,48,1900	0/0:19,0:19:50.93:0,51,1996	0/0:13,0:13:29.32:0,29,1244	0/0:19,0:19:54.17:0,54,2129	0/0:35,0:35:99:0,105,4177	0/0:37,0:37:99:0,105,4193	0/0:13,0:13:39.10:0,39,1536
chr10	58303292	.	AG	A	57.49	PASS	AC=4;AF=0.074;AN=54;BaseQRankSum=4.837;DP=529;FS=1.362;HRun=1;HaplotypeScore=125.8184;InbreedingCoeff=0.8220;MQ=62.54;MQ0=0;MQRankSum=-4.714;QD=4.79;ReadPosRankSum=-1.467;VQSLOD=-0.1115;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:40.91:0,41,799	1/1:2,0:2:6.01:56,6,0	0/0:9,0:9:27.09:0,27,423	0/0:8,0:8:15.05:0,15,240	0/0:23,0:23:66.19:0,66,1005	0/0:20,0:18:54.18:0,54,863	0/0:13,0:13:39.12:0,39,595	./.	0/0:24,0:24:72.25:0,72,1149	0/0:28,0:28:84.29:0,84,1331	0/0:27,0:27:57.17:0,57,864	0/0:14,0:14:42.14:0,42,671	0/0:27,0:27:81.28:0,81,1292	0/0:15,0:15:45.14:0,45,694	0/0:26,0:26:78.27:0,78,1243	0/0:29,0:29:84.29:0,84,1342	1/1:6,4:9:2.77:98,3,0	0/0:17,0:17:45.14:0,45,718	0/0:11,0:11:33.11:0,33,528	0/0:28,0:28:75.24:0,75,1172	0/0:16,0:16:45.10:0,45,665	0/0:16,0:16:42.14:0,42,671	0/0:22,0:22:54.07:0,54,810	0/0:14,0:14:30.57:0,31,471	0/0:19,0:19:57.17:0,57,863	0/0:35,0:35:99:0,105,1623	0/0:36,0:36:99:0,105,1627	0/0:13,0:13:36.12:0,36,567
chr10	58303325	.	ATCTAACTC	A	298.04	PASS	AB=0.667;AC=1;AF=0.019;AN=52;BaseQRankSum=2.349;DP=516;FS=19.458;HRun=0;HaplotypeScore=204.2981;InbreedingCoeff=0.4447;MQ=60.19;MQ0=3;MQRankSum=-2.941;QD=29.80;ReadPosRankSum=-1.254;VQSLOD=1.4392;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:81.23:0,81,1663	./.	0/0:14,0:13:32.29:0,32,1436	0/0:5,0:5:12.04:0,12,455	0/0:26,0:26:69.02:0,69,1293	0/0:19,0:17:45.14:0,45,916	0/0:18,0:18:51.17:0,51,1048	./.	0/0:19,0:19:54.17:0,54,1112	0/0:33,0:33:90.31:0,90,1885	0/0:25,0:25:69.15:0,69,1380	0/0:10,0:10:27.09:0,27,557	0/0:21,0:21:57.17:0,57,2221	0/0:14,0:14:42.14:0,42,1727	0/0:18,0:18:54.19:0,54,1129	0/0:26,0:26:72.23:0,72,1450	0/1:5,5:9:3.31:372,0,3	0/0:18,0:18:50.70:0,51,926	0/0:9,0:9:27.08:0,27,522	0/0:30,0:30:84.25:0,84,1729	0/0:12,0:12:33.11:0,33,703	0/0:16,0:16:32.87:0,33,527	0/0:30,0:30:84.02:0,84,1638	0/0:16,0:16:38.08:0,38,781	0/0:17,0:16:48.16:0,48,1023	0/0:27,0:27:66.23:0,66,1372	0/0:33,0:33:87.28:0,87,1755	0/0:13,0:13:27.09:0,27,574
chr10	58303330	.	ACT	A	15397.17	PASS	AB=0.600;AC=43;AF=0.827;AN=52;BaseQRankSum=6.532;DP=494;FS=1.144;HRun=0;HaplotypeScore=83.0380;InbreedingCoeff=0.8277;MQ=60.21;MQ0=3;MQRankSum=-0.380;QD=35.07;ReadPosRankSum=2.363;VQSLOD=7.2250;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,33:35:27.87:1016,28,0	./.	0/0:15,0:14:39.11:0,39,653	0/0:4,0:4:9.03:0,9,162	1/1:1,25:26:63.17:854,63,0	1/1:1,17:17:42.14:588,42,0	1/1:1,16:17:48.16:672,48,0	./.	1/1:1,18:19:51.17:714,51,0	1/1:1,29:30:90.30:1259,90,0	1/1:0,25:25:66.22:917,66,0	1/1:0,9:9:27.09:378,27,0	0/0:20,0:20:54.19:0,54,972	0/0:14,0:14:39.13:0,39,702	1/1:3,15:18:45.15:630,45,0	1/1:1,25:26:69.23:966,69,0	1/1:10,0:9:3.60:42,4,0	0/1:6,12:18:7.78:461,0,8	1/1:1,7:8:21.07:294,21,0	1/1:2,30:32:84.28:1170,84,0	1/1:2,10:12:27.09:378,27,0	1/1:0,11:11:27.01:335,27,0	1/1:1,28:29:78.23:1071,78,0	1/1:1,15:16:40.02:542,40,0	1/1:0,17:16:48.16:672,48,0	1/1:0,23:23:69.16:926,69,0	1/1:1,30:31:81.27:1133,81,0	1/1:0,9:9:27.09:378,27,0
chr10	58305721	.	GT	G	2460.12	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.668;DP=791;FS=11.815;HRun=1;HaplotypeScore=71.0284;InbreedingCoeff=0.9953;MQ=57.17;MQ0=10;MQRankSum=1.024;QD=36.18;ReadPosRankSum=-1.582;VQSLOD=2.2522;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,153,2389	1/1:0,11:11:30.10:419,30,0	0/0:31,0:8:21.07:0,21,335	0/0:38,0:12:30.07:0,30,435	0/0:18,0:17:48.16:0,48,762	0/0:27,0:27:81.26:0,81,1270	0/0:31,0:31:93.32:0,93,1483	1/1:0,27:26:75.23:1015,75,0	0/0:25,0:25:72.25:0,72,1147	0/0:34,0:34:99:0,99,1583	0/0:21,0:21:60.20:0,60,956	0/0:32,0:32:96.30:0,96,1463	0/0:25,0:25:75.26:0,75,1199	0/0:26,0:26:78.25:0,78,1222	0/0:35,0:35:99:0,105,1655	0/0:25,0:25:75.24:0,75,1173	1/1:1,29:30:83.89:1168,84,0	0/0:33,0:33:96.33:0,96,1533	0/0:22,0:19:57.19:0,57,909	0/0:25,0:25:75.26:0,75,1194	0/0:32,0:32:93.30:0,93,1463	0/0:33,0:33:99:0,99,1558	0/0:24,0:23:66.23:0,66,1052	0/0:40,0:39:99:0,120,1893	0/0:25,0:25:75.25:0,75,1168	0/0:38,0:38:99:0,108,1726	0/0:26,0:25:78.26:0,78,1224	0/0:6,0:6:18.06:0,18,288
chr10	58306183	.	G	GA	26597.76	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-8.923;DP=740;FS=12.251;HRun=1;HaplotypeScore=82.8687;InbreedingCoeff=1.0000;MQ=86.80;MQ0=0;MQRankSum=-8.547;QD=41.89;ReadPosRankSum=3.143;VQSLOD=4.4157;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,23:25:72.24:1071,72,0	1/1:0,22:22:57.19:854,57,0	0/0:26,0:25:69.21:0,69,859	0/0:26,0:26:58.36:0,58,720	1/1:2,44:46:99:1914,129,0	1/1:1,39:40:99:1663,111,0	1/1:0,24:24:69.23:1034,69,0	1/1:3,34:37:99:1446,102,0	1/1:0,21:21:57.19:854,57,0	1/1:2,44:47:99:2051,138,0	1/1:0,16:16:45.15:674,45,0	1/1:0,21:21:63.21:944,63,0	0/0:25,0:25:75.24:0,75,972	0/0:28,0:28:81.26:0,81,1051	1/1:0,20:20:60.20:899,60,0	1/1:0,27:27:75.25:1124,75,0	1/1:0,26:26:69.23:1034,69,0	1/1:0,18:18:54.18:809,54,0	1/1:0,19:19:57.19:852,57,0	1/1:1,27:28:78.26:1168,78,0	1/1:1,32:33:93.32:1394,93,0	1/1:0,26:26:75.25:1124,75,0	1/1:2,18:20:51.17:764,51,0	1/1:0,19:19:54.18:808,54,0	1/1:2,25:27:72.24:1078,72,0	1/1:0,31:31:93.31:1376,93,0	1/1:2,23:25:66.22:988,66,0	1/1:2,15:17:45.15:674,45,0
chr10	58306530	.	T	TGTGG	4725.37	PASS	AB=1.000;AC=31;AF=0.554;AN=56;BaseQRankSum=13.123;DP=618;FS=16.260;HRun=0;HaplotypeScore=223.8539;InbreedingCoeff=0.8015;MQ=66.11;MQ0=8;MQRankSum=-8.710;QD=13.24;ReadPosRankSum=-0.304;VQSLOD=2.9782;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:40,0:40:62.72:446,63,0	0/1:9,0:9:7.28:7,0,84	0/0:30,0:24:54.87:0,55,540	0/0:26,0:17:41.17:0,41,428	1/1:25,0:24:28.86:197,29,0	0/0:17,0:18:39.38:0,39,316	0/0:25,0:25:48.88:0,49,474	0/0:17,0:17:26.43:0,26,314	1/1:18,0:19:52.33:465,52,0	1/1:24,0:23:59.87:397,60,0	1/1:11,0:11:21.20:139,21,0	0/0:25,0:25:28.83:0,29,523	0/0:25,0:25:60:0,60,652	0/0:17,0:17:32.21:0,32,304	1/1:33,0:32:59.71:471,60,0	1/1:18,4:25:68.47:861,68,0	0/0:27,0:27:39.09:0,39,467	0/1:28,0:27:9.93:10,0,438	1/1:16,0:16:40.78:251,41,0	1/1:21,0:21:23.63:159,24,0	1/1:29,0:27:20.39:138,20,0	0/0:22,0:22:52.91:0,53,438	0/1:11,0:11:12.32:12,0,159	0/0:29,0:29:58.70:0,59,491	1/1:17,0:17:27.80:242,28,0	1/1:24,0:22:58.78:455,59,0	1/1:15,0:14:29.07:300,29,0	1/1:9,0:9:15.28:175,15,0
chr10	58306532	.	TCC	T	11770.31	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=4.641;DP=529;FS=7.829;HRun=4;HaplotypeScore=124.7078;InbreedingCoeff=0.9886;MQ=70.94;MQ0=7;MQRankSum=-3.377;QD=27.25;ReadPosRankSum=3.046;VQSLOD=3.2593;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,6:25:60.15:760,60,0	1/1:8,0:8:17.34:254,17,0	0/0:31,0:25:75.20:0,75,1217	0/0:26,0:17:48.11:0,48,750	1/1:19,4:23:17.84:333,18,0	1/1:17,0:17:36.71:501,37,0	1/1:20,1:21:53.03:657,53,0	1/1:5,12:17:33.11:469,33,0	1/1:15,3:18:50.78:599,51,0	1/1:19,4:23:60.62:630,61,0	1/1:8,1:9:20.56:231,21,0	1/1:24,1:25:60.77:682,61,0	0/0:23,0:23:63.16:0,63,1063	0/0:17,0:17:45.05:0,45,628	1/1:17,8:25:54.16:674,54,0	1/1:18,4:22:60.12:650,60,0	1/1:22,2:24:40.88:517,41,0	1/1:26,1:26:59.15:710,59,0	1/1:7,8:15:42.05:524,42,0	1/1:8,5:13:21.07:272,21,0	1/1:16,7:21:21.06:271,21,0	1/1:18,2:20:49.02:583,49,0	1/1:11,0:11:24.91:292,25,0	1/1:23,2:25:61.97:832,62,0	1/1:11,0:11:30.09:395,30,0	1/1:11,2:12:35.98:447,36,0	1/1:6,3:9:21.45:222,21,0	1/1:8,0:8:21:265,21,0
chr10	58307650	.	C	CTGTT	31110.06	PASS	AB=0.969;AC=43;AF=0.768;AN=56;BaseQRankSum=3.460;DP=871;FS=19.197;HRun=0;HaplotypeScore=226.4998;InbreedingCoeff=0.8896;MQ=65.35;MQ0=8;MQRankSum=-4.712;QD=51.42;ReadPosRankSum=0.230;VQSLOD=3.8956;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,40:46:99:2288,102,0	0/0:10,0:10:18:0,18,265	0/0:68,0:49:78.22:0,78,1514	0/0:90,0:41:61.36:0,61,802	1/1:0,25:25:62.91:1148,63,0	1/1:9,17:27:74.74:1723,75,0	1/1:8,26:35:77.94:1500,78,0	0/0:33,0:33:84.28:0,84,1532	1/1:7,16:24:68.56:1402,69,0	1/1:12,25:37:99:2557,108,0	1/1:4,14:19:38.80:668,39,0	1/1:13,25:38:99:2213,102,0	0/0:34,0:34:99:0,99,1843	0/0:30,0:30:87.30:0,87,1628	1/1:10,40:50:99:3174,147,0	1/1:3,29:32:69.16:1717,69,0	0/1:30,1:31:12.50:13,0,1095	1/1:6,14:20:14.91:1237,15,0	1/1:8,17:24:69.22:1657,69,0	1/1:2,15:17:50.96:989,51,0	1/1:7,11:18:21.37:511,21,0	1/1:7,18:25:68.97:1363,69,0	1/1:10,10:20:49.22:785,49,0	1/1:13,16:29:54.03:1013,54,0	1/1:5,19:24:54.07:1245,54,0	1/1:11,20:30:52.57:2049,53,0	1/1:4,25:29:72.11:1701,72,0	1/1:0,3:3:8.99:158,9,0
chr10	58307672	.	GTC	G	6306.88	PASS	AB=0.895;AC=37;AF=0.661;AN=56;BaseQRankSum=6.816;DP=943;FS=2.344;HRun=0;HaplotypeScore=281.9580;InbreedingCoeff=0.7502;MQ=60.79;MQ0=20;MQRankSum=-2.386;QD=10.41;ReadPosRankSum=2.403;VQSLOD=4.4056;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:51,2:52:51.17:0,51,868	0/1:13,0:13:0.81:1,0,148	0/0:81,0:38:18.46:0,18,162	0/1:116,0:34:10.44:10,0,12	0/0:26,0:26:35.82:0,36,373	0/1:15,11:27:5.91:301,0,6	1/1:20,14:34:23.88:276,24,0	0/0:51,0:51:79.98:0,80,770	1/1:7,20:28:56.94:619,57,0	1/1:13,24:37:72.17:812,72,0	1/1:9,6:14:8.52:88,9,0	1/1:9,22:32:48.02:510,48,0	0/0:34,1:35:25.55:0,26,829	0/0:32,1:34:43.32:0,43,1015	1/1:19,31:51:65.85:682,66,0	0/0:25,0:25:39.09:0,39,414	0/0:17,0:32:11.68:0,12,97	1/1:11,8:19:3.04:223,3,0	1/1:21,14:33:42.11:477,42,0	1/1:7,15:22:21.06:243,21,0	1/1:8,16:24:14.04:171,14,0	1/1:5,12:18:20.89:222,21,0	1/1:10,7:17:11.90:139,12,0	1/1:11,28:41:31.47:462,31,0	1/1:10,11:21:18.01:193,18,0	1/1:13,16:29:41.53:538,42,0	1/1:14,11:25:15.94:333,16,0	1/1:1,0:1:2.22:7,2,0
chr10	58308072	.	CCTT	C	16557.98	PASS	AB=0.553;AC=41;AF=0.732;AN=56;BaseQRankSum=15.095;DP=653;FS=0.349;HRun=0;HaplotypeScore=172.8335;InbreedingCoeff=0.9038;MQ=60.07;MQ0=7;MQRankSum=-14.917;QD=38.60;ReadPosRankSum=2.173;VQSLOD=5.7904;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,20:22:48.12:770,48,0	0/0:11,0:11:30.10:0,30,691	0/0:42,0:23:57.14:0,57,996	0/0:55,0:29:12.53:0,13,724	1/1:0,17:17:45.11:716,45,0	1/1:1,14:16:11.32:486,11,0	1/1:1,16:17:27.09:458,27,0	0/0:31,0:31:86.99:0,87,1699	1/1:6,23:29:75.20:1225,75,0	1/1:1,20:21:63.18:1030,63,0	1/1:1,17:18:39.13:661,39,0	1/1:1,23:24:63.21:1057,63,0	0/0:30,0:30:90.31:0,90,2014	0/0:23,0:23:66.23:0,66,1504	1/1:0,28:28:75.26:1260,75,0	1/1:2,27:29:75.26:1274,75,0	0/0:29,0:29:81.26:0,81,1798	1/1:0,7:7:15.05:255,15,0	1/1:3,11:14:36.11:573,36,0	1/1:0,17:17:45.15:763,45,0	0/1:4,17:21:5.68:422,0,6	1/1:2,19:21:48.16:813,48,0	1/1:2,12:14:33.11:560,33,0	1/1:3,26:29:50.91:806,51,0	1/1:2,22:24:57.20:966,57,0	1/1:0,23:23:66.13:1003,66,0	1/1:0,33:33:78.25:1309,78,0	1/1:0,5:5:9.03:153,9,0
chr10	58309314	.	C	CTTT	7251.46	PASS	AB=0.609;AC=47;AF=0.839;AN=56;BaseQRankSum=1.380;DP=587;FS=4.751;HRun=12;HaplotypeScore=105.5003;InbreedingCoeff=0.7026;MQ=60.22;MQ0=13;MQRankSum=-4.715;QD=14.53;ReadPosRankSum=-1.427;VQSLOD=3.1768;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:10,25:37:43.70:641,44,0	1/1:0,0:4:1.21:2,1,0	0/0:26,0:17:5.02:0,5,63	0/0:20,0:9:13.30:0,13,92	1/1:7,16:22:31.96:387,32,0	1/1:16,0:16:21.82:182,22,0	1/1:20,0:18:12.91:101,13,0	1/1:24,0:46:31.19:206,31,0	1/1:4,15:20:11.93:169,12,0	1/1:4,26:30:71.31:926,71,0	1/1:5,9:14:11.67:171,12,0	1/1:16,0:14:3:29,3,0	0/0:18,0:18:40.07:0,40,495	0/0:20,0:20:38.39:0,38,433	1/1:17,3:19:23.48:279,23,0	1/1:7,6:13:27.49:414,27,0	0/1:10,0:26:8.61:9,0,85	1/1:8,0:8:7.20:44,7,0	1/1:18,5:21:41.33:464,41,0	1/1:17,5:25:48.69:505,49,0	1/1:3,6:9:3.01:55,3,0	1/1:21,0:21:17.29:100,17,0	1/1:22,0:21:15.94:229,16,0	1/1:14,0:13:13.36:66,13,0	1/1:5,15:24:36.04:548,36,0	1/1:5,21:26:58.49:695,58,0	1/1:16,4:20:48.41:599,48,0	1/1:11,5:17:35.91:431,36,0
chr10	58312371	.	TTAGGAGGTGTGGCCTAG	T	4725.49	PASS	AB=0.849;AC=13;AF=0.232;AN=56;BaseQRankSum=10.614;DP=821;FS=18.706;HRun=0;HaplotypeScore=344.9228;InbreedingCoeff=-0.3025;MQ=55.61;MQ0=9;MQRankSum=-7.675;QD=10.86;ReadPosRankSum=-2.852;VQSLOD=1.3138;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,7:47:63.26:0,63,5274	0/0:9,0:9:24.08:0,24,1775	0/0:22,0:14:39.13:0,39,1244	0/0:19,0:13:27.07:0,27,1152	0/1:31,11:40:99:544,0,4171	0/0:24,0:24:57.16:0,57,3727	0/0:26,0:26:63.20:0,63,4142	0/0:34,0:31:70.39:0,70,2964	0/1:24,3:27:99:347,0,4832	0/1:35,13:47:99:752,0,6186	0/1:27,2:27:71.71:72,0,3766	0/0:28,0:28:66.23:0,66,5048	0/0:24,0:24:63.20:0,63,4434	0/0:19,0:19:45.15:0,45,3094	0/1:23,7:29:99:356,0,3920	0/1:27,7:31:99:202,0,5460	0/0:40,0:39:99:0,99,6543	0/0:24,0:24:41.11:0,41,3726	0/1:17,2:11:99:118,0,1016	0/1:27,3:30:99:217,0,4205	0/1:51,6:57:99:228,0,7645	0/0:23,0:23:60.14:0,60,3915	0/0:15,0:15:36.08:0,36,2039	0/0:31,0:31:63.20:0,63,4480	0/1:26,7:32:99:303,0,4194	0/1:24,11:33:99:566,0,3001	0/1:29,9:37:99:769,0,4222	0/1:11,2:13:99:250,0,1671
chr10	58313045	.	C	CT	2490.19	PASS	AB=0.925;AC=29;AF=0.518;AN=56;BaseQRankSum=7.516;DP=582;FS=19.208;HRun=13;HaplotypeScore=97.6389;InbreedingCoeff=0.6655;MQ=65.53;MQ0=1;MQRankSum=1.914;QD=6.94;ReadPosRankSum=0.155;VQSLOD=0.7413;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:29:57.04:292,57,0	0/0:10,0:12:6.28:0,6,109	0/1:13,1:12:14.28:14,0,47	0/0:8,0:7:0.36:0,0,16	1/1:36,0:37:58.48:362,58,0	0/0:25,0:25:35.47:0,35,246	0/0:15,3:18:10.28:0,10,181	0/0:22,0:23:23.56:0,24,163	1/1:21,0:21:34.44:185,34,0	1/1:20,0:20:13.90:162,14,0	1/1:22,0:22:39.41:243,39,0	0/0:10,0:10:8.74:0,9,59	0/0:19,0:19:20.49:0,20,140	0/0:12,0:12:4.44:0,4,54	1/1:23,0:24:33.63:206,34,0	1/1:12,0:12:17.18:88,17,0	0/0:27,0:27:9.11:0,9,182	0/0:19,0:19:35.56:0,36,246	1/1:24,0:24:35.65:161,36,0	1/1:30,0:30:43.12:233,43,0	1/1:10,0:10:14.24:70,14,0	0/0:25,0:29:30.21:0,30,247	0/1:21,5:26:26.15:26,0,134	0/0:21,0:21:35.41:0,35,243	1/1:24,0:24:41.80:247,42,0	1/1:22,0:22:0.66:123,1,0	1/1:30,0:31:1.99:192,2,0	0/1:11,0:11:0.01:85,0,0
chr10	58313046	.	T	TC	7080.76	PASS	AB=0.554;AC=27;AF=0.482;AN=56;BaseQRankSum=-3.773;DP=599;FS=1.532;HRun=1;HaplotypeScore=87.8011;InbreedingCoeff=0.9155;MQ=65.49;MQ0=1;MQRankSum=0.166;QD=21.20;ReadPosRankSum=5.455;VQSLOD=5.0925;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,30:30:60.13:740,60,0	0/0:12,0:12:29.49:0,29,308	0/0:15,0:12:21.04:0,21,258	0/0:8,0:7:1.06:0,1,61	1/1:2,36:38:43.72:727,44,0	0/0:25,0:25:71.96:0,72,790	0/0:18,0:18:46.61:0,47,518	0/0:22,0:22:60.10:0,60,666	1/1:2,20:22:36.06:462,36,0	1/1:1,19:20:38.09:468,38,0	1/1:1,22:23:50.94:586,51,0	0/0:12,0:12:27.05:0,27,289	0/0:19,0:19:57.08:0,57,607	0/0:12,0:12:34.13:0,34,330	1/1:4,21:26:41.96:501,42,0	1/1:0,12:12:18.06:233,18,0	0/0:27,0:27:73.57:0,74,760	0/0:19,0:19:51.99:0,52,611	1/1:1,23:24:68.67:720,69,0	1/1:7,26:33:47.88:546,48,0	1/1:0,10:10:15.05:194,15,0	0/0:29,0:29:77.08:0,77,734	0/0:26,0:26:53.10:0,53,537	0/0:21,0:21:57.10:0,57,641	1/1:4,25:29:46.26:569,46,0	1/1:4,20:24:51.24:607,51,0	0/1:6,25:31:2.73:504,0,3	1/1:1,10:11:14.59:226,15,0
chr10	58313297	.	T	TCA	680	PASS	AB=1.000;AC=45;AF=0.978;AN=46;DP=623;FS=0.000;HRun=0;HaplotypeScore=106.0097;InbreedingCoeff=0.2377;MQ=38.38;MQ0=4;QD=1.35;VQSLOD=1.5199;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	1/1:14,0:14:0.94:2,1,0	./.	./.	./.	1/1:19,0:18:1.89:5,2,0	1/1:22,1:23:11.38:124,11,0	1/1:18,0:14:4.36:30,4,0	1/1:14,2:16:1.41:4,1,0	1/1:28,0:28:2.80:8,3,0	./.	1/1:19,0:19:4.69:26,5,0	1/1:17,0:17:1.41:3,1,0	1/1:25,1:26:3.48:36,3,0	1/1:31,0:31:4.35:28,4,0	1/1:12,0:12:1.89:5,2,0	1/1:21,0:21:7.33:50,7,0	1/1:10,0:10:1.25:3,1,0	1/1:29,1:26:13.53:95,14,0	1/1:26,1:26:6.95:63,7,0	1/1:12,0:12:4.24:28,4,0	1/1:33,0:33:6.49:89,6,0	1/1:46,0:46:5.84:54,6,0	1/1:15,1:16:5.96:44,6,0	1/1:32,0:32:3.13:7,3,0	1/1:24,0:23:4.26:48,4,0	1/1:16,0:16:1.25:3,1,0	0/1:12,0:11:0:0,0,0
chr10	58314174	.	ATAC	A	261.43	PASS	AB=0.980;AC=18;AF=0.321;AN=56;BaseQRankSum=7.726;DP=577;FS=63.257;HRun=0;HaplotypeScore=229.5323;InbreedingCoeff=-0.3313;MQ=34.30;MQ0=2;MQRankSum=-7.205;QD=0.79;ReadPosRankSum=-0.190;VQSLOD=0.5083;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,1:20:3.23:0,3,9	0/1:5,0:5:0.13:0,0,58	0/0:16,0:7:21.49:0,21,392	0/0:11,0:1:9.03:0,9,209	0/1:24,1:24:3.38:3,0,136	0/1:12,0:12:6.92:7,0,34	0/0:28,0:28:0.78:0,1,298	0/1:33,0:26:21.86:22,0,629	0/0:24,1:25:4.67:0,5,289	0/1:35,1:32:46.06:46,0,911	1/1:17,0:16:8.95:47,9,0	0/1:21,0:20:50.86:51,0,171	0/1:26,0:25:10.64:11,0,195	0/0:14,1:15:6.07:0,6,141	0/0:19,0:19:18.86:0,19,384	0/1:18,0:18:35.20:35,0,147	0/1:14,1:12:13.71:14,0,188	0/1:9,0:7:28.78:29,0,209	0/1:15,2:13:27.37:27,0,610	0/0:18,0:18:20.38:0,20,364	0/0:43,0:40:15.85:0,16,400	0/1:21,0:20:13.96:14,0,15	0/1:23,1:23:16.63:17,0,254	0/0:18,0:18:8.82:0,9,125	0/1:23,0:22:32.22:32,0,89	0/0:29,1:27:10.31:0,10,1206	0/1:19,1:20:35.29:35,0,49	0/1:10,0:10:22.48:22,0,277
chr10	58314192	.	AC	A	291.24	PASS	AB=0.844;AC=13;AF=0.232;AN=56;BaseQRankSum=13.802;DP=875;FS=131.415;HRun=2;HaplotypeScore=350.6137;InbreedingCoeff=-0.2838;MQ=36.82;MQ0=11;MQRankSum=-9.273;QD=0.72;ReadPosRankSum=-0.217;VQSLOD=0.2798;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,3:27:46.16:0,46,605	0/1:5,3:8:8.42:8,0,166	0/0:38,0:10:30.10:0,30,445	0/0:30,0:8:25.94:0,26,378	0/1:21,11:32:4.38:4,0,247	0/0:13,5:18:25.55:0,26,463	0/1:34,5:39:14.08:14,0,799	0/1:52,2:47:25.05:25,0,1120	0/0:29,10:38:9.45:0,9,600	0/1:43,10:48:99:113,0,1046	0/1:18,5:23:10.21:10,0,179	0/0:23,13:35:5.50:0,5,386	0/1:26,6:31:4.32:4,0,572	0/0:28,11:39:52.05:0,52,736	0/1:25,3:27:38.31:38,0,626	0/1:23,2:25:6.42:6,0,500	0/0:18,3:19:40.41:0,40,554	0/0:16,0:14:24.74:0,25,476	0/0:29,1:23:57.19:0,57,841	0/0:22,1:23:34.79:0,35,481	0/0:58,4:59:69.75:0,70,1017	0/0:25,5:30:33.18:0,33,456	0/0:19,9:27:14.40:0,14,343	0/0:27,1:28:30.21:0,30,622	0/1:27,5:30:43.96:44,0,313	0/1:32,11:39:93.59:94,0,850	0/1:22,6:28:55.16:55,0,387	0/1:8,2:10:19.21:19,0,247
chr10	58314253	.	C	CCA	2087.46	PASS	AB=0.862;AC=5;AF=0.089;AN=56;BaseQRankSum=8.972;DP=1230;FS=10.419;HRun=0;HaplotypeScore=366.9127;InbreedingCoeff=0.0352;MQ=42.32;MQ0=125;MQRankSum=-5.978;QD=10.82;ReadPosRankSum=-3.577;VQSLOD=2.1600;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:41,18:54:99:956,0,475	0/0:13,0:11:8.70:0,9,114	0/1:39,0:5:0:0,0,0	0/0:58,0:11:2.67:0,3,14	0/1:25,6:28:99:395,0,186	0/0:22,0:22:7:0,7,285	0/0:39,0:38:62.23:0,62,874	0/0:48,0:32:39.30:0,39,614	0/0:58,0:56:63.89:0,64,952	0/0:74,0:58:3.87:0,4,825	0/0:19,0:17:31.63:0,32,368	0/0:50,0:48:52.54:0,53,901	0/0:38,0:38:77.58:0,78,948	0/0:54,0:52:56.57:0,57,1131	0/0:41,0:36:42.97:0,43,743	0/1:25,13:36:99:834,0,174	0/0:35,0:34:54.22:0,54,915	0/0:31,0:27:44.65:0,45,867	0/0:48,0:20:14.84:0,15,296	0/0:35,0:30:61.22:0,61,734	0/0:116,0:107:99:0,168,2082	0/0:35,0:35:42.01:0,42,598	0/1:25,0:25:0.26:0,0,453	0/0:55,0:53:99:0,116,1386	0/0:41,0:36:42.37:0,42,557	0/0:62,0:48:82.02:0,82,962	0/0:38,0:37:34.91:0,35,778	0/0:10,0:9:18.03:0,18,211
chr10	58314408	.	GACACACACAC	G	8302.31	PASS	AB=0.846;AC=39;AF=0.696;AN=56;BaseQRankSum=2.176;DP=811;FS=14.193;HRun=0;HaplotypeScore=242.1533;InbreedingCoeff=0.6790;MQ=46.47;MQ0=49;MQRankSum=-3.990;QD=16.70;ReadPosRankSum=5.037;VQSLOD=2.2706;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:32:11.86:244,12,0	0/0:11,0:12:18.04:0,18,579	0/0:68,0:14:6.49:0,6,136	0/0:65,0:17:9.03:0,9,215	1/1:9,0:11:1.57:6,2,0	1/1:6,8:13:11.97:233,12,0	1/1:16,16:31:14.98:271,15,0	0/0:61,0:55:71.60:0,72,1289	1/1:18,9:26:29.90:892,30,0	1/1:25,1:22:9.26:293,9,0	0/1:13,1:13:1.61:126,0,2	1/1:12,5:16:24.07:601,24,0	0/0:22,0:26:54.02:0,54,1635	0/0:33,0:36:75.22:0,75,2456	1/1:18,6:27:26.49:605,26,0	1/1:8,0:23:14.95:349,15,0	0/0:43,0:45:96.25:0,96,3595	1/1:19,8:27:5.40:1102,5,0	0/1:28,4:20:26.34:404,0,26	1/1:8,5:14:14.88:329,15,0	1/1:58,5:61:15.65:342,16,0	1/1:9,4:13:14.96:289,15,0	1/1:5,5:11:12.42:164,12,0	1/1:33,2:35:20.36:340,20,0	1/1:8,2:12:8.80:239,9,0	1/1:19,5:21:23.29:595,23,0	1/1:11,7:18:21.07:532,21,0	0/1:6,4:10:5.95:345,0,6
chr10	58315226	.	G	GT	1822.49	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=-7.188;DP=690;FS=0.471;HRun=9;HaplotypeScore=72.6811;InbreedingCoeff=0.8306;MQ=75.75;MQ0=0;MQRankSum=-0.150;QD=18.41;ReadPosRankSum=-1.647;VQSLOD=3.3937;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,52:59:99:1492,138,0	0/0:10,0:10:20.66:0,21,182	0/0:31,0:28:67.31:0,67,517	0/1:19,0:16:3.55:4,0,114	1/1:3,17:20:43.29:451,43,0	0/0:22,0:22:50.95:0,51,439	0/0:20,0:20:53.97:0,54,466	0/0:35,1:36:50.78:0,51,670	0/0:20,0:20:50.96:0,51,437	0/0:19,0:19:50.36:0,50,425	0/0:22,0:23:61.96:0,62,516	0/0:30,0:30:80.88:0,81,688	0/0:21,0:21:59.93:0,60,514	0/0:27,0:27:77.84:0,78,660	0/0:26,2:28:35.80:0,36,540	0/0:33,1:35:65.94:0,66,735	0/0:26,0:26:49.29:0,49,552	0/0:27,0:27:65.95:0,66,568	0/0:30,0:30:74.89:0,75,631	0/0:14,0:14:35.29:0,35,286	0/0:29,0:29:71.97:0,72,625	0/0:20,0:20:32.55:0,33,433	0/0:16,0:16:44.99:0,45,391	0/0:28,0:28:62.33:0,62,525	0/0:18,0:18:47.96:0,48,411	0/0:27,0:27:68.96:0,69,596	0/0:28,0:28:77.95:0,78,668	0/0:6,0:6:15:0,15,130
chr10	58319096	.	G	GA	13279.58	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-10.449;DP=674;FS=11.901;HRun=2;HaplotypeScore=65.0025;InbreedingCoeff=0.9998;MQ=88.96;MQ0=0;MQRankSum=-4.030;QD=39.52;ReadPosRankSum=2.754;VQSLOD=4.5587;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,43:47:99:1727,120,0	0/0:12,0:12:36.11:0,36,446	0/0:26,0:26:66.19:0,66,800	0/0:23,0:23:65.65:0,66,748	1/1:1,18:19:57.14:779,57,0	0/0:22,0:22:60.19:0,60,744	0/0:27,0:27:75.23:0,75,930	0/0:36,0:36:99:0,102,1232	1/1:0,18:18:54.18:777,54,0	1/1:1,22:23:66.22:946,66,0	1/1:0,17:17:48.16:691,48,0	0/0:28,0:28:84.26:0,84,1041	0/0:21,0:21:63.14:0,63,762	0/0:28,0:28:75.21:0,75,905	1/1:1,15:16:45.15:648,45,0	1/1:0,17:17:51.17:735,51,0	0/0:35,0:35:99:0,102,1251	0/0:17,0:17:42.13:0,42,517	1/1:1,22:23:66.22:949,66,0	1/1:0,18:18:51.17:734,51,0	1/1:3,46:49:99:1935,135,0	0/0:12,0:12:36.10:0,36,433	0/0:12,0:12:36.10:0,36,432	0/0:39,0:39:99:0,108,1310	1/1:2,15:18:42.14:599,42,0	1/1:1,27:28:81.27:1161,81,0	1/1:2,32:34:84.28:1210,84,0	1/1:0,9:9:27.09:389,27,0
chr10	58321031	.	TA	T	2375.65	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=10.447;DP=641;FS=4.116;HRun=5;HaplotypeScore=60.4115;InbreedingCoeff=0.9933;MQ=71.68;MQ0=2;MQRankSum=-0.400;QD=27.95;ReadPosRankSum=1.883;VQSLOD=4.0891;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,27:29:69.20:783,69,0	0/0:12,0:12:36.11:0,36,478	0/0:9,0:9:14.92:0,15,298	0/0:9,0:9:24.03:0,24,280	1/1:1,36:37:99:1157,102,0	0/0:43,0:43:99:0,123,1647	0/0:21,0:21:63.21:0,63,862	0/0:26,0:26:75.24:0,75,1010	0/0:18,0:18:54.18:0,54,739	0/0:39,0:39:99:0,108,1473	0/0:20,0:20:60.20:0,60,821	0/0:19,0:19:54.17:0,54,723	0/0:18,0:18:54.18:0,54,738	0/0:16,0:16:42.13:0,42,558	0/0:18,0:18:51.17:0,51,697	1/1:0,19:19:51.15:579,51,0	0/0:25,0:25:75.24:0,75,1012	0/0:31,0:29:84.24:0,84,1113	0/0:17,0:16:51.17:0,51,698	0/0:29,0:29:78.26:0,78,1066	0/0:19,0:19:57.19:0,57,780	0/0:31,0:31:90.25:0,90,1196	0/0:25,0:25:75.25:0,75,1019	0/0:16,0:16:45.14:0,45,599	0/0:23,0:23:63.21:0,63,862	0/0:31,0:31:87.28:0,87,1175	0/0:30,0:30:87.29:0,87,1189	0/0:11,0:11:33.11:0,33,451
chr10	58321910	.	A	AGCCCCTTGC	6261.39	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=3.092;DP=652;FS=14.015;HRun=0;HaplotypeScore=178.3139;InbreedingCoeff=0.9889;MQ=87.57;MQ0=0;MQRankSum=-11.247;QD=94.87;ReadPosRankSum=-0.590;VQSLOD=4.2624;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,7:15:30.10:1247,30,0	0/0:22,0:22:66.23:0,66,1858	0/0:21,0:21:63.18:0,63,1674	0/0:27,0:27:70.84:0,71,2052	1/1:7,12:21:41.75:1654,42,0	0/0:25,0:25:72.23:0,72,2138	0/0:17,0:17:51.16:0,51,1409	0/0:32,0:32:93.30:0,93,2510	0/0:15,0:15:39.13:0,39,1193	0/0:39,0:39:99:0,111,3297	0/0:25,0:25:72.22:0,72,2071	0/0:23,0:23:57.20:0,57,1682	0/0:15,0:15:42.14:0,42,1284	0/0:25,0:25:72.25:0,72,2190	0/0:22,0:22:63.22:0,63,1882	1/1:12,17:30:78.27:3360,78,0	0/0:23,0:23:66.23:0,66,2022	0/0:19,0:19:48.16:0,48,1371	0/0:13,0:13:39.13:0,39,1130	0/0:23,0:23:69.24:0,69,2074	0/0:27,0:27:81.22:0,81,2262	0/0:24,0:24:69.24:0,69,2101	0/0:28,0:28:84.29:0,84,2472	0/0:26,0:26:78.25:0,78,2307	0/0:28,0:28:81.28:0,81,2415	0/0:29,0:29:84.27:0,84,2409	0/0:31,0:31:84.25:0,84,2240	0/0:7,0:7:12.04:0,12,368
chr10	58322326	.	C	CTTT	800.79	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.663;DP=623;FS=3.793;HRun=8;HaplotypeScore=96.4228;InbreedingCoeff=0.9295;MQ=70.63;MQ0=0;MQRankSum=-8.256;QD=23.55;ReadPosRankSum=-7.360;VQSLOD=0.1201;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:1,1:2:3.01:60,3,0	0/0:12,0:12:33.10:0,33,433	0/0:10,0:11:24.07:0,24,315	0/0:11,0:11:17.85:0,18,236	1/1:11,6:21:44.41:504,44,0	0/0:26,0:26:63.16:0,63,811	0/0:28,0:28:72.20:0,72,928	0/0:32,0:32:84.22:0,84,1079	0/0:24,0:24:72.23:0,72,946	0/0:34,0:34:93.29:0,93,1209	0/0:19,0:19:51.16:0,51,669	0/0:12,0:12:27.07:0,27,354	0/0:13,0:13:36.11:0,36,470	0/0:25,0:25:66.20:0,66,867	0/0:35,0:35:90.27:0,90,1182	1/1:7,0:10:25.37:368,25,0	0/0:26,0:26:72.21:0,72,932	0/0:30,0:30:81.24:0,81,1064	0/0:39,0:40:99:0,110,1415	0/0:25,0:26:69.14:0,69,871	0/0:16,0:16:42.08:0,42,519	0/0:33,0:33:84.22:0,84,1089	0/0:28,0:29:70.73:0,71,943	0/0:19,0:19:51.14:0,51,670	0/0:22,0:22:63.18:0,63,801	0/0:29,0:29:75.21:0,75,985	0/0:23,0:23:60.18:0,60,788	0/0:13,0:13:30.07:0,30,394
chr10	58322373	.	A	AC	1840.01	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=11.138;DP=613;FS=7.634;HRun=0;HaplotypeScore=74.5113;InbreedingCoeff=0.9989;MQ=71.81;MQ0=0;MQRankSum=-6.024;QD=35.38;ReadPosRankSum=0.464;VQSLOD=2.8323;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,11:11:29.93:390,30,0	0/0:10,0:10:30.09:0,30,402	0/0:16,0:17:44.10:0,44,551	0/0:11,0:11:27.86:0,28,318	1/1:2,20:22:57.19:846,57,0	0/0:32,0:32:89.65:0,90,1208	0/0:14,0:14:39.13:0,39,543	0/0:30,0:30:90.13:0,90,1147	0/0:14,0:14:42.12:0,42,557	0/0:33,0:33:93.29:0,93,1243	0/0:16,0:16:48.15:0,48,653	0/0:15,0:15:45.14:0,45,611	0/0:15,0:15:45.14:0,45,613	0/0:22,0:22:66.17:0,66,841	0/0:26,0:26:78.25:0,78,1072	1/1:2,17:19:52.23:746,52,0	0/0:32,0:32:87.27:0,87,1182	0/0:24,0:24:72.15:0,72,945	0/0:34,0:34:99:0,99,1294	0/0:27,0:27:78.26:0,78,1090	0/0:21,0:21:63.19:0,63,844	0/0:25,0:25:75.24:0,75,1034	0/0:32,0:32:95.98:0,96,1293	0/0:23,0:23:69.19:0,69,940	0/0:25,0:25:75.22:0,75,1008	0/0:31,0:31:87.28:0,87,1197	0/0:23,0:23:63.18:0,63,843	0/0:9,0:9:27.09:0,27,377
chr10	58323224	.	A	AT	3511.64	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=-9.596;DP=391;FS=5.776;HRun=8;HaplotypeScore=40.4669;InbreedingCoeff=0.9075;MQ=64.41;MQ0=8;MQRankSum=3.070;QD=22.80;ReadPosRankSum=-1.531;VQSLOD=3.0607;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:42.02:0,42,384	1/1:1,7:8:21.06:242,21,0	0/0:20,0:11:10.48:0,10,75	0/1:27,0:12:2.96:3,0,34	0/0:17,0:17:48.02:0,48,439	1/1:1,15:16:42.12:485,42,0	1/1:3,6:9:7.22:161,7,0	1/1:6,17:23:57.17:656,57,0	0/0:13,0:13:36.01:0,36,329	0/0:12,0:12:33.01:0,33,300	0/0:14,0:14:27:0,27,247	1/1:1,10:11:27.08:312,27,0	0/0:8,0:8:24.01:0,24,220	0/0:13,0:13:36.01:0,36,325	0/0:11,0:11:30.02:0,30,275	0/0:10,0:10:30:0,30,271	1/1:3,12:15:32.09:409,32,0	1/1:3,13:16:36.11:415,36,0	0/0:18,0:17:41.99:0,42,378	0/0:20,0:20:54.01:0,54,488	0/0:5,0:5:6:0,6,55	1/1:0,8:8:21.06:242,21,0	1/1:0,6:6:18.05:208,18,0	1/1:1,12:13:31.44:378,31,0	0/0:25,0:25:66.03:0,66,604	0/0:12,0:12:33.01:0,33,299	0/0:17,0:17:45.02:0,45,412	0/0:4,0:4:11.99:0,12,104
chr10	58323982	.	CTGTGTG	C	2136.73	PASS	AB=0.719;AC=19;AF=0.475;AN=40;BaseQRankSum=-0.872;DP=487;FS=1.918;HRun=0;HaplotypeScore=79.6884;InbreedingCoeff=0.6721;MQ=39.19;MQ0=60;MQRankSum=0.884;QD=13.35;ReadPosRankSum=0.017;VQSLOD=2.3838;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	0/0:9,0:8:4.04:0,4,13	./.	./.	0/1:14,0:21:0.02:0,0,0	0/0:27,0:18:6.02:0,6,126	0/0:13,0:6:2.68:0,3,12	0/0:16,0:9:6.02:0,6,121	1/1:10,0:11:12.03:208,12,0	1/1:9,5:10:13.45:197,13,0	./.	0/0:21,0:16:0:0,0,0	0/0:18,0:15:26.83:0,27,502	0/0:14,0:13:15.02:0,15,330	1/1:10,0:20:3:25,3,0	1/1:10,0:14:15.05:247,15,0	./.	0/0:14,0:10:9.03:0,9,204	1/1:15,6:13:18.06:353,18,0	./.	./.	0/0:31,0:28:6:0,6,72	0/0:17,0:15:5.52:0,6,81	./.	1/1:15,0:14:24.08:452,24,0	1/1:11,11:21:36.07:632,36,0	1/1:8,1:12:3.01:55,3,0	1/1:4,0:4:6.02:115,6,0
chr10	58323997	.	T	TGC	431.57	PASS	AB=1.000;AC=14;AF=0.304;AN=46;BaseQRankSum=-2.189;DP=462;FS=11.742;HRun=0;HaplotypeScore=76.3223;InbreedingCoeff=0.4467;MQ=37.30;MQ0=69;MQRankSum=-0.571;QD=2.49;ReadPosRankSum=-1.380;VQSLOD=0.4939;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	1/1:9,0:8:9.29:55,9,0	./.	./.	0/0:17,0:14:2.99:0,3,24	1/1:23,0:17:20.94:198,21,0	0/0:12,0:4:2.84:0,3,34	0/1:13,0:5:30.03:48,0,30	0/0:13,0:12:12.02:0,12,123	0/0:15,0:9:23.74:0,24,185	./.	0/1:23,0:17:0:0,0,0	0/0:23,0:16:29.78:0,30,372	0/0:16,0:14:14.47:0,14,198	0/0:17,0:15:3:0,3,25	0/0:13,0:12:17.76:0,18,123	0/1:12,0:6:16.08:16,0,29	0/1:14,0:9:8.11:87,0,8	0/0:23,0:12:29.83:0,30,221	0/0:19,0:16:3:0,3,25	1/1:34,0:25:0.47:1,0,0	1/1:24,6:26:11.83:89,12,0	1/1:15,0:13:8.84:83,9,0	./.	0/0:12,0:11:24.06:0,24,268	0/0:28,0:23:65.59:0,66,499	0/0:13,0:9:11.84:0,12,101	0/0:2,0:2:6.02:0,6,67
chr10	58324013	.	TGTGTGTGA	T	1979.96	PASS	AB=1.000;AC=17;AF=0.386;AN=44;BaseQRankSum=0.472;DP=401;FS=17.871;HRun=0;HaplotypeScore=81.4639;InbreedingCoeff=0.2538;MQ=37.78;MQ0=54;MQRankSum=2.137;QD=13.03;ReadPosRankSum=3.731;VQSLOD=0.2232;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:11,0:10:6.37:0,6,31	./.	./.	1/1:13,0:10:0.08:0,0,0	0/0:20,0:13:6.02:0,6,126	0/0:12,0:3:2.68:0,3,12	0/0:15,0:4:11.99:0,12,175	0/1:14,0:13:29.72:188,0,30	0/1:17,0:12:37.50:153,0,37	./.	0/0:19,0:13:0.47:0,0,1	0/0:22,0:15:30.71:0,31,522	0/0:16,0:14:14.88:0,15,353	1/1:17,0:15:3.47:26,3,0	1/1:12,0:10:15.94:221,16,0	0/0:10,0:4:1.92:0,2,14	0/1:11,0:7:1.17:1,0,194	0/1:17,0:11:41.45:332,0,41	./.	0/0:27,0:19:10.21:0,10,73	0/0:21,0:17:6:0,6,72	0/0:14,0:12:6:0,6,81	./.	1/1:12,0:11:7.27:432,7,0	0/1:24,0:18:70.85:573,0,71	1/1:13,0:8:5.19:77,5,0	1/1:2,0:2:6.02:115,6,0
chr10	58324045	.	A	AGGGAGG	232.13	PASS	AB=1.000;AC=5;AF=0.093;AN=54;BaseQRankSum=2.987;DP=483;FS=1.300;HRun=0;HaplotypeScore=87.4302;InbreedingCoeff=0.3927;MQ=39.18;MQ0=47;MQRankSum=-0.844;QD=3.14;ReadPosRankSum=-1.215;VQSLOD=1.2490;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:15:28.70:201,0,29	0/0:11,0:11:15.05:0,15,141	0/0:5,0:3:3.01:0,3,65	0/0:11,0:4:12:0,12,170	1/1:23,0:20:8.99:100,9,0	0/0:18,0:13:6.01:0,6,62	0/0:12,0:5:3.01:0,3,38	0/0:24,0:4:12.03:0,12,139	0/0:13,0:12:18.06:0,18,315	0/0:21,0:14:39.09:0,39,653	0/0:13,0:13:9.02:0,9,101	0/0:21,0:14:5.79:0,6,74	0/0:21,0:15:32.23:0,32,497	0/0:20,0:18:21.05:0,21,323	0/0:27,0:24:27.09:0,27,460	1/1:8,13:23:2.66:40,3,0	0/0:10,0:7:18.02:0,18,243	0/0:10,0:5:11.92:0,12,118	0/0:14,0:11:27.09:0,27,486	0/0:16,0:13:14.74:0,15,223	0/0:26,0:21:27.01:0,27,409	0/0:18,0:15:6.02:0,6,102	./.	0/0:12,0:7:3.01:0,3,50	0/0:25,0:20:29.75:0,30,439	0/0:31,0:22:63.20:0,63,1044	0/0:16,0:14:15.51:0,16,193	0/0:6,0:6:18:0,18,188
chr10	58326382	.	TCACACA	T	164.64	PASS	AC=10;AF=0.227;AN=44;BaseQRankSum=2.614;DP=536;FS=0.000;HRun=0;HaplotypeScore=112.6891;InbreedingCoeff=0.5425;MQ=66.37;MQ0=14;MQRankSum=-2.011;QD=1.55;ReadPosRankSum=0.930;VQSLOD=1.9586;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:27.09:0,27,713	./.	./.	./.	0/0:15,0:15:9.03:0,9,224	./.	./.	./.	0/0:18,0:16:9.03:0,9,217	0/0:23,0:23:27.09:0,27,625	0/0:12,0:11:6.02:0,6,165	1/1:18,5:23:3.01:60,3,0	0/0:17,0:16:15.05:0,15,319	0/0:11,0:11:9.03:0,9,179	0/0:20,0:19:3.01:0,3,91	0/0:18,0:20:8.51:0,9,93	1/1:27,0:27:3.01:42,3,0	0/0:13,0:13:18.06:0,18,417	0/0:13,0:13:18.06:0,18,467	0/0:17,0:17:3.01:0,3,80	0/0:32,0:30:6.02:0,6,178	1/1:13,1:16:6.01:102,6,0	1/1:12,0:14:2.99:24,3,0	1/1:24,2:26:3.01:60,3,0	0/0:16,0:15:9.03:0,9,230	0/0:23,0:23:27.09:0,27,629	0/0:10,0:9:4.24:0,4,28	0/0:2,0:1:0.47:0,0,1
chr10	58326429	.	CACACACACAG	C	250.14	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=-0.530;DP=491;FS=3.068;HRun=0;HaplotypeScore=132.7800;InbreedingCoeff=0.6339;MQ=52.27;MQ0=20;MQRankSum=-2.810;QD=4.47;ReadPosRankSum=-1.734;VQSLOD=2.2837;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:38:95.88:0,96,2018	1/1:2,0:2:3.44:21,3,0	0/0:9,0:4:5.17:0,5,82	0/0:6,0:3:8.86:0,9,60	0/0:14,0:14:33.51:0,34,834	0/0:20,0:19:33.65:0,34,404	0/0:20,0:20:46.79:0,47,468	1/1:16,0:15:23.79:247,24,0	0/0:19,0:17:36.46:0,36,748	0/0:19,0:19:40.74:0,41,1319	0/0:5,0:4:6.02:0,6,235	0/0:21,0:21:47.88:0,48,434	0/0:19,0:18:46.28:0,46,1160	0/0:19,0:19:50.96:0,51,1171	0/0:22,0:20:41.30:0,41,578	0/0:26,0:24:62.32:0,62,995	1/1:1,17:18:2.61:100,3,0	0/0:17,0:17:51.08:0,51,1283	0/0:15,0:13:32.32:0,32,926	0/0:12,0:12:21:0,21,277	0/0:37,0:31:62.60:0,63,737	0/1:20,0:20:2.27:2,0,328	0/0:17,0:16:19.55:0,20,190	0/0:22,0:22:39.79:0,40,370	0/0:15,0:14:21.03:0,21,519	0/0:21,0:20:55.94:0,56,1358	0/0:19,0:19:35.29:0,35,432	0/0:1,0:1:2.98:0,3,21
chr10	58327089	.	C	CTGGGTTT	27391.27	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-5.670;DP=708;FS=2.052;HRun=0;HaplotypeScore=161.7242;InbreedingCoeff=0.9993;MQ=78.99;MQ0=0;MQRankSum=-20.757;QD=92.23;ReadPosRankSum=-2.549;VQSLOD=5.3240;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:18,31:52:99:4461,120,0	1/1:0,6:8:21.07:857,21,0	0/0:20,0:20:60.17:0,60,1380	0/0:25,0:25:65.89:0,66,1551	1/1:3,23:28:63.22:2431,63,0	1/1:4,18:22:63.22:2471,63,0	1/1:8,19:30:78.27:2911,78,0	1/1:10,15:25:69.24:2710,69,0	0/0:23,0:23:66.23:0,66,1756	0/0:28,0:28:78.27:0,78,2101	0/0:22,0:22:66.23:0,66,1760	1/1:2,16:23:51.18:2040,51,0	0/0:28,0:28:84.29:0,84,2252	0/0:25,0:25:75.26:0,75,1960	0/0:29,0:29:84.27:0,84,2177	0/0:23,0:23:69.23:0,69,1806	1/1:13,10:25:54.19:2132,54,0	1/1:4,8:13:27.09:1105,27,0	0/0:29,0:29:87.29:0,87,2245	0/0:21,0:21:60.21:0,60,1579	0/0:46,0:46:99:0,135,3475	1/1:2,18:24:60.21:2327,60,0	1/1:8,17:31:62.60:2228,63,0	1/1:7,9:16:45.15:1718,45,0	0/0:17,0:17:51.18:0,51,1334	0/0:26,0:26:72.25:0,72,1942	0/0:24,0:24:72.25:0,72,1929	0/0:25,0:25:75.26:0,75,1987
chr10	58328324	.	CTCTT	C	1790.50	PASS	AB=1.000;AC=16;AF=0.286;AN=56;BaseQRankSum=-2.020;DP=567;FS=18.208;HRun=0;HaplotypeScore=122.5634;InbreedingCoeff=0.4415;MQ=65.08;MQ0=21;MQRankSum=2.902;QD=9.63;ReadPosRankSum=-3.617;VQSLOD=0.8687;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:23,3:25:12.69:304,13,0	1/1:6,0:6:15.84:120,16,0	0/0:27,0:13:13.80:0,14,161	0/0:65,0:20:20.86:0,21,240	1/1:16,0:16:41.93:343,42,0	0/1:20,0:20:99:104,0,220	0/0:17,0:17:21.63:0,22,152	1/1:27,0:26:64.50:557,64,0	0/0:15,0:15:14.69:0,15,224	0/0:24,0:23:62.71:0,63,837	0/0:20,0:20:29.27:0,29,263	0/0:13,0:13:14.86:0,15,218	0/0:22,0:21:45.12:0,45,792	0/0:17,0:17:36.53:0,37,536	0/0:25,0:25:41.82:0,42,439	0/1:4,0:4:21.96:22,0,22	1/1:19,1:20:21.07:148,21,0	0/1:20,0:21:99:103,0,247	0/0:8,0:8:17.05:0,17,243	0/0:33,0:32:12.32:0,12,530	0/0:5,0:5:9.41:0,9,68	0/1:18,0:18:99:100,0,123	0/1:20,0:20:99:142,0,121	0/0:14,0:14:19.89:0,20,310	0/1:8,0:8:33.54:34,0,90	0/0:24,0:24:11.37:0,11,941	0/0:39,0:38:77.95:0,78,955	0/0:13,0:11:24.03:0,24,352
chr10	58328328	.	TTC	T	1743.48	PASS	AB=0.987;AC=15;AF=0.268;AN=56;BaseQRankSum=1.228;DP=529;FS=0.491;HRun=0;HaplotypeScore=105.9973;InbreedingCoeff=0.4588;MQ=68.46;MQ0=16;MQRankSum=2.826;QD=10.38;ReadPosRankSum=3.510;VQSLOD=3.1867;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:23:16.90:31,0,17	0/0:5,0:5:0:0,0,0	0/0:22,0:12:23.09:0,23,346	0/0:60,0:22:12.26:0,12,488	0/0:18,0:18:2.58:0,3,22	0/1:19,0:19:17.69:295,0,18	1/1:7,9:16:13.09:97,13,0	0/0:25,0:24:1.85:0,2,21	0/0:15,0:15:23.68:0,24,329	0/0:23,0:23:60.20:0,60,949	0/0:12,0:12:30.88:0,31,423	1/1:11,0:11:23.49:155,23,0	0/0:21,0:21:45.15:0,45,732	0/0:16,0:16:36.12:0,36,599	0/0:19,0:19:48.09:0,48,703	0/1:5,0:5:20.16:20,0,24	0/1:21,0:21:18.36:128,0,18	1/1:17,3:20:4.04:336,4,0	0/0:8,0:8:15.05:0,15,243	0/0:31,0:30:60.17:0,60,916	0/0:5,0:5:8.04:0,8,123	1/1:20,1:21:34.48:413,34,0	1/1:17,0:17:35.55:352,36,0	0/1:13,1:14:4.25:90,0,4	0/0:9,0:9:9.03:0,9,141	0/0:24,0:24:60.20:0,60,935	0/0:34,0:34:81.27:0,81,1251	0/0:12,0:10:24.08:0,24,396
chr10	58329016	.	G	GT	730.09	PASS	AB=0.571;AC=3;AF=0.054;AN=56;BaseQRankSum=7.917;DP=508;FS=17.262;HRun=0;HaplotypeScore=59.3298;InbreedingCoeff=0.7510;MQ=77.75;MQ0=7;MQRankSum=-2.694;QD=19.73;ReadPosRankSum=1.304;VQSLOD=3.9255;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:4,15:20:3.51:381,0,4	0/0:9,0:9:27.09:0,27,376	0/0:42,0:18:23.26:0,23,428	0/0:33,0:20:28.20:0,28,265	1/1:3,14:17:31.12:455,31,0	0/0:22,0:22:63.20:0,63,863	0/0:16,0:16:48.13:0,48,633	0/0:20,0:20:54.17:0,54,737	0/0:18,0:18:54.16:0,54,732	0/0:20,0:20:57.18:0,57,780	0/0:18,0:18:54.07:0,54,708	0/0:19,0:19:46.31:0,46,736	0/0:17,0:17:51.17:0,51,710	0/0:12,0:12:36.11:0,36,479	0/0:19,0:19:57.16:0,57,761	0/0:12,0:12:36.12:0,36,503	0/0:16,0:16:48.16:0,48,669	0/0:24,0:24:72.22:0,72,980	0/0:22,0:22:63.17:0,63,838	0/0:16,0:16:48.14:0,48,642	0/0:7,0:7:21.07:0,21,291	0/0:4,0:4:12.04:0,12,168	0/0:15,0:15:45.15:0,45,629	0/0:5,0:5:15.05:0,15,200	0/0:17,0:17:51.17:0,51,712	0/0:40,0:40:99:0,117,1617	0/0:16,0:16:45.14:0,45,611	0/0:12,0:12:36.12:0,36,503
chr10	58329267	.	G	GTATTT	2596.18	PASS	AC=22;AF=0.423;AN=52;BaseQRankSum=2.485;DP=397;FS=3.190;HRun=0;HaplotypeScore=93.7753;InbreedingCoeff=0.7783;MQ=71.55;MQ0=2;MQRankSum=-3.366;QD=17.31;ReadPosRankSum=-3.451;VQSLOD=2.6914;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:10,13:23:33.34:1011,33,0	1/1:1,0:2:3.01:65,3,0	0/0:16,0:10:1.25:0,1,39	0/0:29,0:19:0.26:0,0,50	1/1:7,1:10:5.99:106,6,0	1/1:8,0:8:12.04:230,12,0	1/1:11,0:11:1.25:3,1,0	1/1:46,0:46:33.09:556,33,0	0/0:10,0:10:15.05:0,15,273	0/0:16,0:16:27.08:0,27,464	0/0:12,0:12:18.06:0,18,328	1/1:6,0:6:9.03:190,9,0	0/0:10,0:10:21.07:0,21,382	0/0:12,0:12:24.04:0,24,402	0/0:15,0:15:15.05:0,15,273	1/1:7,0:7:6.02:149,6,0	1/1:18,0:18:11.93:111,12,0	1/1:15,0:15:15.05:299,15,0	0/0:21,0:21:18.06:0,18,319	0/0:10,0:10:18.06:0,18,328	0/0:18,0:18:18.04:0,18,296	./.	1/1:4,0:4:3.01:64,3,0	./.	0/0:20,0:20:42.14:0,42,764	0/0:21,0:21:36.12:0,36,655	0/0:17,0:17:24.08:0,24,430	0/0:14,0:14:12.04:0,12,218
chr10	58330394	.	C	CCAAAATGATTCTTGAGCCT	2289.17	PASS	AB=0.667;AC=25;AF=0.962;AN=26;BaseQRankSum=-1.286;DP=39;FS=0.000;HRun=0;HaplotypeScore=31.0236;InbreedingCoeff=-0.1455;MQ=156.20;MQ0=0;MQRankSum=-1.174;QD=69.37;ReadPosRankSum=-0.839;VQSLOD=2.6412;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	1/1:1,0:1:3.01:104,3,0	1/1:4,0:8:20.99:661,21,0	0/1:3,1:6:1.45:792,0,1	1/1:3,0:3:9:100,9,0	1/1:1,0:1:3.01:157,3,0	./.	1/1:2,0:2:6.02:106,6,0	1/1:2,0:2:5.98:69,6,0	1/1:3,0:3:9.01:154,9,0	./.	./.	./.	./.	./.	./.	./.	./.	1/1:1,0:1:2.99:23,3,0	1/1:2,0:2:6.01:75,6,0	./.	./.	./.	./.	./.	1/1:1,0:1:2.99:23,3,0	1/1:1,0:2:3.01:77,3,0	1/1:1,0:1:2.99:23,3,0
chr10	58335552	.	C	CAAA	7337.36	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=5.944;DP=515;FS=13.193;HRun=9;HaplotypeScore=89.9668;InbreedingCoeff=0.9815;MQ=70.16;MQ0=0;MQRankSum=-3.801;QD=30.83;ReadPosRankSum=-1.132;VQSLOD=2.1617;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,1:13:30.03:399,30,0	1/1:3,1:8:15.02:193,15,0	0/0:12,0:10:10.35:0,10,116	0/0:6,0:7:12.03:0,12,142	1/1:7,0:24:54.04:693,54,0	1/1:9,22:35:69.21:1289,69,0	1/1:2,6:9:15.05:296,15,0	1/1:15,0:30:51.11:645,51,0	0/0:14,0:14:39.11:0,39,477	0/0:21,0:21:57.14:0,57,720	0/0:25,0:26:58.71:0,59,755	1/1:3,13:20:39.11:694,39,0	0/0:12,0:12:33.10:0,33,417	0/0:16,0:16:42.11:0,42,531	0/0:23,0:23:57.10:0,57,679	1/1:3,0:15:29.80:225,30,0	1/1:4,0:17:21.07:302,21,0	1/1:3,20:23:51.13:965,51,0	0/0:18,0:19:45:0,45,536	0/0:28,0:28:75.23:0,75,947	0/0:7,0:7:18.05:0,18,227	1/1:2,13:15:33.11:589,33,0	1/1:4,14:19:39:753,39,0	1/1:3,7:10:15.52:296,16,0	0/0:18,0:17:48.13:0,48,605	0/0:37,0:37:99:0,102,1250	0/0:23,0:23:66.12:0,66,773	0/0:13,0:14:42.07:0,42,511
chr10	58335716	.	T	TACAC	2154.92	PASS	AB=0.826;AC=17;AF=0.315;AN=54;BaseQRankSum=6.867;DP=623;FS=0.000;HRun=0;HaplotypeScore=136.7941;InbreedingCoeff=0.7149;MQ=60.30;MQ0=6;MQRankSum=-9.040;QD=10.02;ReadPosRankSum=-2.448;VQSLOD=2.2992;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:36:44.90:0,45,674	1/1:11,0:12:9.03:168,9,0	0/0:23,0:8:17.77:0,18,167	0/0:33,0:12:12.97:0,13,213	0/0:22,0:22:51.13:0,51,664	1/1:26,0:26:3.01:68,3,0	0/1:2,20:24:0.37:0,0,1	1/1:18,0:38:62.66:988,63,0	0/0:21,0:20:40.93:0,41,731	0/0:22,0:22:54.17:0,54,924	0/0:19,0:19:28.84:0,29,493	0/1:22,0:22:38.75:39,0,39	0/0:17,0:17:45.15:0,45,808	0/0:21,0:21:53.97:0,54,941	0/0:23,0:23:54.12:0,54,796	0/1:21,0:22:2.02:213,0,2	1/1:20,0:20:11.07:191,11,0	1/1:11,5:16:24.45:507,24,0	0/0:15,0:14:36.11:0,36,554	0/0:22,0:22:51.14:0,51,816	0/0:29,0:29:66.22:0,66,1040	1/1:2,19:21:3.01:78,3,0	1/1:2,8:12:3.01:78,3,0	./.	0/0:26,0:26:53.44:0,53,787	0/0:27,0:27:63.21:0,63,1053	0/0:26,0:26:57.16:0,57,914	0/0:6,0:6:17.90:0,18,237
chr10	58335723	.	A	AGTG	325.44	PASS	AB=0.678;AC=13;AF=0.232;AN=56;BaseQRankSum=6.758;DP=654;FS=14.541;HRun=0;HaplotypeScore=146.8578;InbreedingCoeff=0.2660;MQ=55.01;MQ0=9;MQRankSum=-0.255;QD=1.47;ReadPosRankSum=1.763;VQSLOD=2.1238;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:37:63.96:0,64,902	0/1:1,0:11:7.21:68,0,7	0/0:21,0:6:11.86:0,12,176	0/0:33,0:8:21.07:0,21,280	0/0:25,0:25:60.04:0,60,771	1/1:4,0:27:6:62,6,0	1/1:33,0:32:11.43:103,11,0	0/0:28,0:28:19.34:0,19,285	0/0:12,0:22:16.49:0,16,415	0/0:17,0:25:8.38:0,8,584	0/0:9,0:20:14.94:0,15,248	0/1:5,0:23:46.47:49,0,46	0/0:18,0:18:48.16:0,48,787	0/0:19,0:19:54.18:0,54,862	0/0:12,0:28:19.32:0,19,456	0/0:20,0:20:37.28:0,37,405	0/1:5,0:21:49.88:50,0,53	0/1:20,0:20:99:105,0,111	0/0:11,0:15:30.58:0,31,397	0/0:14,0:22:30.84:0,31,517	0/0:17,0:40:27.25:0,27,618	1/1:20,0:19:0.86:2,1,0	0/1:14,0:14:10.39:23,0,10	0/1:3,2:24:0.16:0,0,0	0/1:11,0:27:7.83:8,0,306	0/0:16,0:28:50.04:0,50,720	0/0:13,0:22:27.61:0,28,510	0/0:3,0:6:3.09:0,3,128
chr10	58335757	.	GTGTT	G	2322.25	PASS	AB=0.996;AC=14;AF=0.250;AN=56;BaseQRankSum=-4.474;DP=670;FS=0.000;HRun=0;HaplotypeScore=138.4560;InbreedingCoeff=0.0400;MQ=59.09;MQ0=17;MQRankSum=-1.369;QD=7.56;ReadPosRankSum=-4.354;VQSLOD=1.0356;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:42,0:41:99:204,0,327	0/0:8,0:8:12.02:0,12,133	0/0:38,0:17:34.29:0,34,411	0/0:38,0:17:31.72:0,32,374	0/1:26,1:27:99:162,0,208	0/1:16,0:16:57.86:58,0,68	0/1:30,0:29:32.66:125,0,33	0/1:39,0:39:49.25:640,0,49	0/0:21,0:20:36.40:0,36,543	0/0:19,0:19:30.43:0,30,755	0/0:17,0:17:15.35:0,15,286	0/1:23,0:23:62.13:142,0,62	0/0:19,0:19:47.88:0,48,744	0/0:19,0:19:40.27:0,40,710	0/0:25,0:25:45.12:0,45,825	1/1:6,17:23:28.55:527,29,0	0/1:24,0:24:50.03:50,0,160	0/1:19,0:17:81.14:106,0,81	0/0:14,0:13:11.27:0,11,292	0/0:23,0:23:39.71:0,40,800	0/0:48,0:48:91.91:0,92,1247	1/1:23,0:22:26.87:211,27,0	0/1:16,0:16:97.29:97,0,107	0/1:25,0:25:20.32:168,0,20	0/0:25,0:25:50.56:0,51,791	0/0:26,0:25:21.58:0,22,734	0/0:15,0:15:31.25:0,31,399	0/0:8,0:8:24.05:0,24,404
chr10	58335759	.	GTT	G	2605	PASS	AB=0.994;AC=20;AF=0.357;AN=56;BaseQRankSum=-2.619;DP=662;FS=3.890;HRun=3;HaplotypeScore=118.4068;InbreedingCoeff=0.4990;MQ=59.81;MQ0=17;MQRankSum=-3.093;QD=7.99;ReadPosRankSum=-2.457;VQSLOD=-0.4220;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:39,1:39:0.84:348,1,0	0/0:7,0:7:3.72:0,4,13	0/0:37,0:17:37.26:0,37,433	0/0:36,0:15:31.70:0,32,343	0/1:25,1:26:4.03:295,0,4	0/1:15,0:15:12.88:59,0,13	1/1:32,0:31:9.68:175,10,0	1/1:38,0:38:54.54:746,55,0	0/0:20,0:19:36.38:0,36,374	0/0:20,0:20:35.55:0,36,622	0/0:18,0:18:20.24:0,20,269	0/1:23,0:23:39.16:149,0,39	0/0:18,0:18:42:0,42,591	0/0:18,0:18:37:0,37,508	0/0:26,0:26:48.08:0,48,577	1/1:20,1:21:30.78:256,31,0	0/1:24,0:24:43.77:71,0,44	0/1:19,0:17:3.88:127,0,4	0/0:16,0:15:25.05:0,25,272	0/0:24,0:24:42.23:0,42,632	0/0:49,0:49:73.96:0,74,963	1/1:21,1:21:29.65:235,30,0	1/1:17,0:17:4.49:149,4,0	1/1:25,0:25:9.62:177,10,0	0/0:23,1:24:5.65:0,6,444	0/1:24,0:23:2.17:2,0,458	0/0:15,0:15:31.73:0,32,298	0/0:8,0:8:24.05:0,24,290
chr10	58336507	.	TC	T	5949.06	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=16.997;DP=775;FS=5.463;HRun=7;HaplotypeScore=94.8319;InbreedingCoeff=0.9993;MQ=91.91;MQ0=0;MQRankSum=-2.431;QD=17.50;ReadPosRankSum=2.539;VQSLOD=4.5597;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,0:51:85.56:251,86,0	1/1:1,0:13:24.44:72,24,0	0/0:35,0:35:54.17:0,54,945	0/0:33,0:33:87.23:0,87,1035	1/1:0,0:25:42.78:125,43,0	1/1:2,22:24:63.14:643,63,0	1/1:3,27:30:46.45:789,46,0	1/1:4,0:30:33.63:115,34,0	0/0:29,0:29:81.25:0,81,1001	0/0:48,0:48:99:0,132,1658	0/0:24,0:24:69.20:0,69,854	1/1:1,30:31:64.47:862,64,0	0/0:32,0:32:90.29:0,90,1132	0/0:24,0:24:69.22:0,69,868	0/0:24,0:24:66.21:0,66,830	1/1:1,20:21:25.40:574,25,0	1/1:0,0:30:44.81:131,45,0	1/1:1,13:14:27.06:275,27,0	0/0:20,0:20:48.15:0,48,604	0/0:26,0:26:75.23:0,75,930	0/0:23,1:24:41.60:0,42,820	1/1:0,31:31:93.21:948,93,0	1/1:0,24:24:69.16:704,69,0	1/1:0,16:16:45.10:459,45,0	0/0:23,0:23:69.22:0,69,868	0/0:34,0:34:87.25:0,87,1057	0/0:29,0:29:81.25:0,81,1006	0/0:30,0:30:81.24:0,81,1004
chr10	58337172	.	C	CT	13686.65	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-4.512;DP=713;FS=3.615;HRun=1;HaplotypeScore=76.5270;InbreedingCoeff=0.9999;MQ=86.48;MQ0=0;MQRankSum=-1.299;QD=40.49;ReadPosRankSum=2.074;VQSLOD=5.6226;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,41:41:99:1663,111,0	1/1:0,12:12:36.12:540,36,0	0/0:31,0:31:80.73:0,81,1000	0/0:27,0:27:78.19:0,78,977	1/1:0,21:21:57.19:853,57,0	1/1:0,28:28:75.21:1098,75,0	1/1:0,20:20:57.19:854,57,0	1/1:2,32:34:93.29:1354,93,0	0/0:28,0:28:72.23:0,72,932	0/0:36,0:36:99:0,102,1313	0/0:28,0:28:72.23:0,72,934	1/1:0,34:34:96.28:1412,96,0	0/0:26,0:26:75.24:0,75,973	0/0:21,0:21:54.17:0,54,699	0/0:26,0:26:72.23:0,72,934	1/1:1,30:31:78.26:1167,78,0	1/1:1,21:22:54.18:809,54,0	1/1:0,25:25:72.24:1073,72,0	0/0:16,0:16:45.10:0,45,565	0/0:28,0:28:84.27:0,84,1084	0/0:30,0:30:84.26:0,84,1077	1/1:1,32:33:93.27:1361,93,0	1/1:1,22:23:63.21:943,63,0	1/1:0,14:14:39.09:559,39,0	0/0:23,0:23:66.21:0,66,856	0/0:24,0:24:69.22:0,69,896	0/0:21,0:21:57.18:0,57,737	0/0:10,0:10:30.10:0,30,389
chr10	58337323	.	T	TCATGGTGAAGCTGATACAATGCAGAT	4046.11	PASS	AB=0.800;AC=37;AF=0.974;AN=38;BaseQRankSum=-2.694;DP=69;FS=9.675;HRun=0;HaplotypeScore=48.5049;InbreedingCoeff=-0.1669;MQ=131.95;MQ0=0;MQRankSum=-1.406;QD=67.44;ReadPosRankSum=0.501;VQSLOD=0.6195;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	1/1:1,0:1:2.98:22,3,0	1/1:2,0:5:15.05:660,15,0	0/1:9,1:12:37.43:1148,0,37	./.	1/1:0,0:1:3.01:108,3,0	./.	1/1:3,0:5:15.03:347,15,0	1/1:1,0:1:3:25,3,0	1/1:2,0:4:9.03:273,9,0	./.	1/1:2,0:3:3.01:89,3,0	1/1:0,0:3:3.01:90,3,0	1/1:1,0:2:3.01:103,3,0	1/1:3,0:3:3.01:57,3,0	./.	1/1:1,0:2:3.01:85,3,0	./.	1/1:2,0:3:6.02:152,6,0	1/1:1,0:1:3.01:78,3,0	1/1:2,0:2:3.01:49,3,0	1/1:0,0:2:3.01:105,3,0	1/1:2,0:3:6.01:116,6,0	./.	./.	1/1:1,0:4:12.04:347,12,0	1/1:0,0:3:6.02:193,6,0	./.
chr10	58388203	.	G	GA	1124.31	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=8.477;DP=613;FS=0.000;HRun=0;HaplotypeScore=117.2605;InbreedingCoeff=0.8146;MQ=78.34;MQ0=0;MQRankSum=-5.060;QD=13.38;ReadPosRankSum=0.923;VQSLOD=4.3504;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,26:29:62.96:678,63,0	0/0:8,0:8:17.59:0,18,109	0/0:20,0:20:51.07:0,51,590	0/0:15,0:14:32.13:0,32,394	1/1:7,24:32:41.88:546,42,0	0/0:29,0:29:73.67:0,74,522	0/0:10,0:10:23.75:0,24,197	0/0:26,0:26:77.34:0,77,666	0/0:12,0:12:19.75:0,20,202	0/0:29,0:29:87.28:0,87,1195	0/0:29,0:29:84.28:0,84,1166	0/0:22,0:22:50.06:0,50,355	0/0:21,0:21:63.20:0,63,863	0/0:17,0:17:51.16:0,51,695	0/0:27,0:27:81.26:0,81,1108	0/1:23,0:23:6.74:30,0,7	0/0:22,0:22:26.31:0,26,249	0/0:12,0:11:18.46:0,18,118	0/0:31,0:31:93.17:0,93,1242	0/0:30,0:30:90.28:0,90,1218	0/0:11,0:11:33.11:0,33,461	0/0:23,0:23:65.21:0,65,500	0/0:25,0:25:72.49:0,72,471	0/0:14,0:14:29.64:0,30,232	0/0:22,0:22:66.22:0,66,922	0/0:35,0:35:99:0,102,1397	0/0:29,0:28:87.25:0,87,1185	0/0:10,0:10:24.05:0,24,299
chr10	58388204	.	G	GA	6193.91	PASS	AB=0.538;AC=27;AF=0.482;AN=56;BaseQRankSum=5.420;DP=622;FS=6.225;HRun=9;HaplotypeScore=100.3312;InbreedingCoeff=0.8929;MQ=78.07;MQ0=0;MQRankSum=-0.406;QD=21.28;ReadPosRankSum=0.961;VQSLOD=4.9939;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:30:66.11:713,66,0	1/1:0,8:8:21.02:219,21,0	0/0:20,0:20:27.19:0,27,241	0/0:15,0:14:17.24:0,17,172	1/1:33,0:33:54.71:624,55,0	1/1:4,25:30:66.01:711,66,0	1/1:2,8:10:18.05:199,18,0	1/1:8,17:25:30.20:527,30,0	1/1:2,9:12:29.75:293,30,0	0/0:29,1:30:44.79:0,45,618	0/0:30,0:30:77.98:0,78,677	1/1:2,20:22:45.12:498,45,0	0/0:23,0:23:56.95:0,57,490	0/0:17,0:17:47.98:0,48,413	0/0:27,0:27:68.01:0,68,576	1/1:1,1:24:53.35:366,53,0	1/1:2,21:23:13.06:372,13,0	1/1:4,8:11:1.63:207,2,0	0/0:30,0:31:53.07:0,53,615	0/0:29,0:29:77.94:0,78,669	0/0:11,0:11:32.99:0,33,286	1/1:4,19:23:51.57:552,52,0	1/1:5,18:25:66.70:678,67,0	0/1:2,12:14:21.91:235,0,22	0/0:22,0:22:59.98:0,60,521	0/0:35,1:36:62.76:0,63,768	0/0:30,0:29:83.79:0,84,711	0/0:10,0:10:29.90:0,30,240
chr10	58390290	.	TTTGTCCCC	T	2258.01	PASS	AB=0.769;AC=13;AF=0.232;AN=56;BaseQRankSum=10.529;DP=570;FS=0.601;HRun=0;HaplotypeScore=203.2399;InbreedingCoeff=0.8953;MQ=76.20;MQ0=0;MQRankSum=-9.559;QD=27.20;ReadPosRankSum=3.240;VQSLOD=3.3372;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,154,6734	0/0:12,0:12:36.10:0,36,1412	0/0:18,0:18:54.18:0,54,2157	0/0:11,0:11:30.07:0,30,817	0/0:32,0:32:96.32:0,96,4199	1/1:5,10:15:36.04:713,36,0	0/1:7,3:10:7.70:174,0,8	0/0:29,0:29:84.29:0,84,3637	1/1:7,5:12:15.04:301,15,0	0/0:27,0:27:81.28:0,81,3734	0/0:14,0:14:42.14:0,42,1885	1/1:3,5:8:15.05:341,15,0	0/0:27,0:27:78.27:0,78,3385	0/0:17,0:17:51.18:0,51,2358	0/0:24,0:24:72.24:0,72,3108	0/0:19,0:19:57.20:0,57,2638	0/0:21,0:21:63.22:0,63,2902	0/0:8,0:8:14.87:0,15,105	0/0:18,0:18:54.14:0,54,2047	0/0:28,0:28:84.28:0,84,3774	0/0:33,0:33:99:0,99,4430	1/1:6,6:12:15.05:317,15,0	1/1:6,7:13:21.07:415,21,0	1/1:9,4:13:12.01:183,12,0	0/0:31,0:31:93.32:0,93,4235	0/0:22,0:22:66.23:0,66,3056	0/0:31,0:31:93.30:0,93,4185	0/0:14,0:14:42.14:0,42,1944
chr10	58390300	.	TTGCATTTGAAATTTCATTTCCAGG	T	6474.18	PASS	AC=14;AF=0.259;AN=54;BaseQRankSum=10.263;DP=524;FS=3.018;HRun=0;HaplotypeScore=363.1967;InbreedingCoeff=0.9154;MQ=78.85;MQ0=0;MQRankSum=-9.615;QD=161.85;ReadPosRankSum=4.196;VQSLOD=4.0684;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,151,16022	0/0:10,0:10:30.10:0,30,2831	0/0:21,0:21:63.22:0,63,3410	0/0:7,0:8:0.60:0,1,1025	0/0:31,0:31:93.32:0,93,8586	1/1:0,10:10:30.10:1792,30,0	1/1:0,3:3:9.03:513,9,0	0/0:30,0:30:87.29:0,87,6373	1/1:0,5:5:15.05:831,15,0	0/0:28,0:28:84.29:0,84,8952	0/0:12,0:12:36.10:0,36,3296	1/1:0,5:5:15.05:901,15,0	0/0:23,0:23:69.24:0,69,7088	0/0:21,0:21:63.22:0,63,6402	0/0:23,0:23:69.24:0,69,6997	0/0:19,0:19:57.20:0,57,5605	0/0:24,0:24:72.23:0,72,6291	./.	0/0:15,0:15:45.15:0,45,3652	0/0:27,0:27:81.28:0,81,8273	0/0:35,0:35:99:0,105,11210	1/1:0,6:6:15.05:878,15,0	1/1:0,7:7:21.07:1200,21,0	1/1:0,4:4:5.97:359,6,0	0/0:31,0:31:93.32:0,93,9341	0/0:25,0:25:75.24:0,75,6385	0/0:36,0:36:99:0,108,10477	0/0:15,0:15:45.14:0,45,4017
chr10	58390541	.	A	AT	12405.46	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-3.688;DP=640;FS=15.771;HRun=8;HaplotypeScore=69.5430;InbreedingCoeff=0.9943;MQ=73.11;MQ0=1;MQRankSum=-4.165;QD=22.97;ReadPosRankSum=2.306;VQSLOD=4.0676;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:80.97:0,81,727	1/1:0,7:7:18.05:208,18,0	0/0:20,0:19:35.84:0,36,319	0/0:13,0:13:21.12:0,21,207	0/0:39,0:39:92.98:0,93,838	1/1:2,1:20:42.81:230,43,0	1/1:4,0:17:31.25:159,31,0	1/1:2,20:22:32.70:620,33,0	1/1:2,0:12:25.57:130,26,0	1/1:8,27:35:81.07:890,81,0	1/1:5,28:34:80.99:884,81,0	1/1:1,0:21:51.30:273,51,0	1/1:1,20:21:48.14:554,48,0	1/1:2,11:13:33.10:381,33,0	1/1:3,21:24:54.16:623,54,0	1/1:1,9:10:21.06:242,21,0	1/1:4,33:37:90.27:1039,90,0	1/1:1,0:15:28.48:145,28,0	1/1:6,20:26:63.16:701,63,0	1/1:7,28:35:81.24:934,81,0	1/1:1,11:12:27.08:312,27,0	1/1:4,0:26:54.25:285,54,0	1/1:4,0:28:54.04:275,54,0	1/1:0,0:16:39.92:211,40,0	1/1:1,23:24:60.18:692,60,0	1/1:0,20:20:60.18:690,60,0	1/1:6,41:47:99:1443,126,0	1/1:3,14:16:42.12:485,42,0
chr10	58390796	.	CATATGTACTATATTATGTGTGTACCCATATACACACATACACACAA	C	16484.39	PASS	AC=22;AF=0.407;AN=54;BaseQRankSum=13.083;DP=547;FS=9.320;HRun=0;HaplotypeScore=556.6088;InbreedingCoeff=0.9584;MQ=76.26;MQ0=0;MQRankSum=-9.661;QD=84.97;ReadPosRankSum=5.250;VQSLOD=0.9615;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:72.15:0,72,8320	0/0:5,0:5:15.05:0,15,2762	0/0:20,0:20:57.67:0,58,2091	0/0:10,0:10:24.06:0,24,573	0/0:35,0:35:99:0,105,15866	0/0:19,0:19:57.18:0,57,8316	0/0:10,0:10:30.10:0,30,3784	0/0:39,0:39:99:0,111,8267	0/0:20,0:20:60.21:0,60,7769	1/1:1,19:20:35.85:1244,36,0	1/1:3,16:19:9.03:998,9,0	0/0:25,0:25:69.24:0,69,8704	1/1:1,15:16:12.04:1407,12,0	1/1:0,14:15:15.05:1758,15,0	1/1:2,14:16:12.04:1406,12,0	0/0:23,0:23:69.24:0,69,11349	0/0:25,0:25:72.23:0,72,9285	0/0:14,0:14:42.10:0,42,7016	1/1:1,13:14:39.13:1230,39,0	1/1:3,13:16:12.04:1406,12,0	./.	0/0:27,0:27:81.19:0,81,11684	0/0:30,0:30:90.31:0,90,15121	0/0:17,0:17:51.04:0,51,7217	1/1:0,19:19:12.04:1406,12,0	1/1:1,17:18:42.08:2465,42,0	1/1:3,25:28:18.06:2109,18,0	1/1:2,11:13:9.03:1055,9,0
chr10	58390798	.	T	TC	1059.30	PASS	AC=8;AF=0.148;AN=54;BaseQRankSum=6.699;DP=532;FS=1.592;HRun=0;HaplotypeScore=172.7668;InbreedingCoeff=0.7434;MQ=76.70;MQ0=0;MQRankSum=-2.994;QD=16.30;ReadPosRankSum=-1.463;VQSLOD=4.1574;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:72.23:0,72,983	0/0:6,0:6:15.05:0,15,208	0/0:20,0:20:54.65:0,55,743	0/0:9,0:9:22.89:0,23,297	0/0:36,0:36:99:0,108,1492	0/0:19,0:19:54.17:0,54,737	0/0:10,0:10:30.10:0,30,420	0/0:39,0:39:99:0,111,1552	0/0:20,0:20:60.20:0,60,839	1/1:19,0:19:20.77:373,21,0	1/1:16,0:16:1.45:45,1,0	0/0:23,0:23:69.23:0,69,964	0/0:15,0:15:4.98:0,5,12	0/0:14,0:15:6.23:0,6,14	0/0:14,0:14:4.98:0,5,12	0/0:25,0:25:69.23:0,69,965	0/0:26,0:26:75.21:0,75,1008	0/0:14,0:14:42.10:0,42,564	1/1:13,0:13:30.12:521,30,0	0/0:13,0:13:4.98:0,5,12	./.	0/0:28,0:28:81.27:0,81,1133	0/0:30,0:30:90.30:0,90,1259	0/0:17,0:17:51.17:0,51,713	0/0:19,0:19:4.98:0,5,12	1/1:17,0:17:11.80:263,12,0	0/0:25,0:25:7.48:0,7,17	0/0:11,0:11:3.74:0,4,9
chr10	58391325	.	TTAGG	T	5906.76	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=3.816;DP=566;FS=5.898;HRun=0;HaplotypeScore=126.9285;InbreedingCoeff=0.9891;MQ=57.15;MQ0=0;MQRankSum=-2.331;QD=46.88;ReadPosRankSum=3.319;VQSLOD=5.5395;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:78.27:0,78,2181	0/0:7,0:7:21.07:0,21,587	0/0:31,0:27:81.28:0,81,2203	0/0:25,0:22:66.23:0,66,1753	0/0:21,0:21:63.20:0,63,1692	1/1:1,19:20:47.97:958,48,0	1/1:1,9:9:18.06:357,18,0	0/0:32,0:32:96.30:0,96,2613	0/0:22,0:22:54.18:0,54,1483	0/0:26,0:24:72.24:0,72,1944	0/0:17,0:17:51.18:0,51,1338	1/1:2,18:18:51.18:1018,51,0	0/0:19,0:19:39.13:0,39,1089	0/0:23,0:23:39.13:0,39,1043	0/0:21,0:21:39.13:0,39,1068	0/0:22,0:22:66.23:0,66,1825	0/0:22,0:21:63.22:0,63,1745	1/1:1,30:31:75.26:1498,75,0	0/0:15,0:15:33.10:0,33,848	0/0:28,0:28:81.28:0,81,2162	0/0:12,0:12:15.05:0,15,409	1/1:1,18:17:48.08:878,48,0	1/1:0,15:15:39.05:699,39,0	1/1:1,10:11:27.05:499,27,0	0/0:20,0:20:48.16:0,48,1275	0/0:21,0:21:60.20:0,60,1632	0/0:23,0:21:45.15:0,45,1198	0/0:4,0:4:12.04:0,12,336
chr10	58391370	.	C	CAAGT	9341.74	PASS	AB=0.515;AC=25;AF=0.446;AN=56;BaseQRankSum=4.519;DP=565;FS=26.320;HRun=0;HaplotypeScore=146.6505;InbreedingCoeff=0.8827;MQ=49.35;MQ0=23;MQRankSum=-9.848;QD=47.18;ReadPosRankSum=5.560;VQSLOD=3.5454;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,126,1842	0/0:8,0:8:18.04:0,18,301	0/0:10,0:7:14.90:0,15,132	0/0:15,0:8:17.08:0,17,210	0/0:19,0:19:41.98:0,42,554	0/0:27,0:27:66.07:0,66,900	0/0:14,0:13:32.65:0,33,527	0/0:35,0:18:50.90:0,51,552	0/1:1,15:16:23.21:962,0,23	1/1:2,17:16:42.13:1101,42,0	1/1:0,17:17:33.03:770,33,0	0/0:26,0:24:69.04:0,69,1157	1/1:0,10:10:12.04:343,12,0	1/1:1,15:17:24.01:618,24,0	1/1:0,24:24:48.16:1344,48,0	0/0:34,0:34:99:0,102,1980	0/0:28,0:25:75.23:0,75,1446	0/0:32,0:32:83.60:0,84,1339	1/1:8,6:5:15.02:368,15,0	1/1:0,21:23:51.11:1210,51,0	1/1:1,6:8:5.98:76,6,0	0/0:22,0:21:57.01:0,57,835	0/0:24,0:24:66.09:0,66,948	0/0:23,0:23:63.16:0,63,1118	1/1:0,10:9:12.04:313,12,0	1/1:1,10:10:30.10:782,30,0	1/1:0,21:19:45.15:1282,45,0	1/1:0,2:2:6.02:173,6,0
chr10	58392015	.	G	GC	7045.18	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-13.318;DP=538;FS=5.260;HRun=4;HaplotypeScore=59.0262;InbreedingCoeff=0.9932;MQ=87.80;MQ0=0;MQRankSum=-2.859;QD=34.03;ReadPosRankSum=2.261;VQSLOD=5.5763;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:87.23:0,87,976	0/0:5,0:5:15.04:0,15,170	0/0:19,0:19:30.40:0,30,437	0/0:23,0:23:28.67:0,29,513	0/0:17,0:17:48.14:0,48,544	0/0:14,0:14:39.11:0,39,442	0/0:34,0:34:99:0,102,1138	0/0:25,0:25:57.15:0,57,639	1/1:0,17:17:51.17:697,51,0	1/1:0,18:18:51.14:665,51,0	1/1:1,11:12:33.11:451,33,0	0/0:16,0:16:42.11:0,42,468	1/1:0,18:18:45.15:615,45,0	1/1:3,17:20:45.15:607,45,0	1/1:1,12:13:33.11:451,33,0	0/0:14,0:14:39.11:0,39,442	0/0:48,0:48:99:0,120,1348	0/0:37,0:37:99:0,111,1247	1/1:4,15:20:17.13:583,17,0	1/1:0,14:14:42.14:573,42,0	1/1:2,23:25:57.19:780,57,0	0/0:11,0:11:24.06:0,24,272	0/0:14,0:14:42.10:0,42,465	0/0:25,0:25:66.11:0,66,713	1/1:2,17:19:42.14:574,42,0	1/1:1,15:16:42.14:574,42,0	1/1:2,7:9:21.05:270,21,0	1/1:0,6:6:15.05:205,15,0
chr10	58393725	.	GCGC	G	2622.33	PASS	AB=1.000;AC=22;AF=0.393;AN=56;BaseQRankSum=0.669;DP=319;FS=19.495;HRun=0;HaplotypeScore=81.2653;InbreedingCoeff=0.6839;MQ=72.00;MQ0=1;MQRankSum=-4.372;QD=18.47;ReadPosRankSum=0.953;VQSLOD=1.9520;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:16:37.36:302,37,0	0/0:2,0:2:5.99:0,6,56	0/0:11,0:7:20.19:0,20,229	0/0:8,0:7:14.87:0,15,159	1/1:5,0:5:7.31:43,7,0	1/1:1,5:6:18.06:268,18,0	1/1:1,15:16:36.12:575,36,0	0/0:14,1:15:28.97:0,29,316	0/1:14,0:14:2.84:3,0,240	0/0:9,0:9:22.26:0,22,241	0/1:7,0:7:2.99:3,0,100	1/1:0,14:15:36.12:547,36,0	0/1:9,0:10:6.99:7,0,147	0/1:22,0:22:47.51:48,0,340	0/0:10,0:10:26.09:0,26,282	0/0:2,0:2:1.42:0,1,10	0/0:20,0:18:32.97:0,33,352	1/1:0,8:8:15.05:242,15,0	0/0:12,0:12:29.91:0,30,337	0/0:10,0:10:21.56:0,22,200	0/0:33,0:32:27.03:0,27,625	1/1:0,5:5:12.04:187,12,0	1/1:1,7:9:14.56:248,15,0	1/1:0,9:9:21.07:352,21,0	0/0:13,0:13:28.96:0,29,276	0/0:12,0:12:12.97:0,13,254	0/0:13,0:13:20.42:0,20,275	0/0:7,0:7:15.86:0,16,167
chr10	58393728	.	CG	C	4432.77	PASS	AB=0.557;AC=47;AF=0.839;AN=56;BaseQRankSum=-2.003;DP=332;FS=5.533;HRun=9;HaplotypeScore=66.1580;InbreedingCoeff=0.5073;MQ=71.86;MQ0=1;MQRankSum=-1.865;QD=14.30;ReadPosRankSum=3.970;VQSLOD=4.9422;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:12,4:16:28.80:215,29,0	1/1:1,1:2:6:55,6,0	0/0:10,0:7:11.01:0,11,141	0/0:9,0:8:12.03:0,12,128	1/1:4,1:5:8.33:76,8,0	1/1:7,0:7:16.58:83,17,0	1/1:15,0:15:32.21:143,32,0	1/1:5,10:16:27:247,27,0	1/1:2,18:20:32.96:300,33,0	0/1:3,8:11:26.46:156,0,26	1/1:2,5:7:5.98:55,6,0	1/1:16,0:16:32.02:140,32,0	0/1:3,11:14:0.89:176,0,1	1/1:2,20:22:51.01:459,51,0	1/1:5,6:11:12:110,12,0	0/0:2,0:2:5.88:0,6,46	1/1:5,14:18:23.98:214,24,0	1/1:8,0:8:13.37:62,13,0	1/1:4,7:11:14.99:137,15,0	1/1:2,10:12:24:219,24,0	1/1:6,26:32:63.03:575,63,0	1/1:5,0:5:10.43:42,10,0	1/1:8,0:8:12.66:49,13,0	1/1:9,0:9:18.17:69,18,0	1/1:1,12:13:32.98:294,33,0	1/1:4,7:11:14.98:136,15,0	1/1:1,10:11:33.02:302,33,0	0/1:1,7:8:16.61:119,0,17
chr10	58394338	.	TTTTG	T	1097.71	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=6.921;DP=619;FS=3.610;HRun=0;HaplotypeScore=110.5846;InbreedingCoeff=0.9976;MQ=69.47;MQ0=0;MQRankSum=1.177;QD=19.26;ReadPosRankSum=-1.563;VQSLOD=2.7024;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:87.24:0,87,1996	1/1:7,10:17:24.05:386,24,0	0/0:37,0:31:58.07:0,58,1364	0/0:23,0:22:24.08:0,24,484	0/0:21,0:21:54.19:0,54,1286	0/0:21,0:21:48.16:0,48,1123	0/0:21,0:21:57.20:0,57,1362	1/1:8,10:18:27.05:360,27,0	0/0:18,0:18:48.16:0,48,1152	0/0:18,0:18:51.17:0,51,1160	0/0:18,0:18:42.14:0,42,1005	0/0:25,0:25:48.16:0,48,1140	0/0:28,0:28:69.24:0,69,1645	0/0:17,0:17:33.11:0,33,752	0/0:22,0:22:51.17:0,51,1204	0/0:15,0:15:30.10:0,30,713	1/1:5,17:22:30.10:494,30,0	0/0:19,0:19:47.48:0,47,987	0/0:21,0:21:42.14:0,42,961	0/0:23,0:23:54.19:0,54,1318	0/0:18,0:18:45.14:0,45,1011	0/0:22,0:22:60.19:0,60,1422	0/0:19,0:19:39.13:0,39,914	0/0:28,0:27:54.14:0,54,1224	0/0:28,0:28:69.22:0,69,1620	0/0:23,0:23:54.19:0,54,1318	0/0:29,0:29:78.27:0,78,1886	0/0:16,0:16:39.13:0,39,955
chr10	58394415	.	CT	C	3013.27	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=9.194;DP=642;FS=3.897;HRun=9;HaplotypeScore=69.9067;InbreedingCoeff=0.9731;MQ=82.45;MQ0=0;MQRankSum=-1.905;QD=20.64;ReadPosRankSum=3.986;VQSLOD=4.4634;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,2:41:74.82:0,75,1104	0/0:16,0:16:33.09:0,33,373	0/0:22,0:20:13:0,13,335	0/0:22,0:21:36.30:0,36,373	0/0:24,1:25:32.70:0,33,618	1/1:0,19:19:51.03:467,51,0	1/1:3,14:17:36.01:329,36,0	0/0:31,0:31:84.23:0,84,950	0/0:10,0:10:27.08:0,27,312	0/0:26,0:25:66.20:0,66,759	0/0:24,1:25:35.72:0,36,665	1/1:5,23:28:66.03:604,66,0	0/0:35,2:37:44.22:0,44,988	0/0:19,0:19:54.16:0,54,622	0/0:24,1:25:44.75:0,45,769	0/0:22,0:22:66.20:0,66,762	0/0:26,0:26:60.15:0,60,672	1/1:2,13:15:39.02:357,39,0	0/0:26,0:26:69.20:0,69,788	0/0:23,1:24:26.67:0,27,547	0/0:11,0:11:30.09:0,30,346	1/1:6,14:20:39:357,39,0	1/1:1,25:26:68.95:631,69,0	1/1:1,20:21:51.03:467,51,0	0/0:21,2:23:5.22:0,5,555	0/0:24,0:25:62.98:0,63,692	0/0:23,1:24:38.72:0,39,691	0/0:16,0:16:45.13:0,45,519
chr10	58397501	.	TGCAC	T	388.70	PASS	AB=0.872;AC=6;AF=0.107;AN=56;BaseQRankSum=6.693;DP=705;FS=13.491;HRun=0;HaplotypeScore=193.7068;InbreedingCoeff=-0.1334;MQ=60.06;MQ0=3;MQRankSum=-7.097;QD=2.92;ReadPosRankSum=-0.886;VQSLOD=1.7478;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,1:34:31.54:0,32,721	0/0:9,0:9:20.92:0,21,383	0/0:43,0:22:65.54:0,66,1557	0/0:40,0:24:59.99:0,60,1348	0/0:10,1:9:11.72:0,12,281	0/0:4,8:12:8.99:0,9,196	0/0:39,12:50:77.45:0,77,1818	0/0:17,0:17:51.07:0,51,1183	0/1:20,8:28:6.98:7,0,843	0/1:22,6:27:99:267,0,892	0/0:9,7:16:10.64:0,11,262	0/0:27,0:27:0.16:0,0,901	0/0:25,8:33:29.65:0,30,1155	0/0:20,9:29:50.68:0,51,1122	0/0:18,4:22:36.07:0,36,825	0/0:20,0:20:54.17:0,54,1385	0/0:22,10:30:37.71:0,38,919	0/0:22,2:24:17.41:0,17,615	0/0:20,0:18:45.63:0,46,866	0/0:23,2:25:18.76:0,19,338	0/0:47,1:46:50.27:0,50,1106	0/0:13,7:20:26.53:0,27,571	0/0:10,3:13:16.58:0,17,420	0/0:23,1:24:20.35:0,20,453	0/1:14,0:14:17.21:17,0,182	0/1:25,1:26:73.23:73,0,995	0/1:24,1:25:13.76:14,0,771	0/1:7,5:11:99:130,0,351
chr10	58397505	.	C	CGTGT	4524.22	PASS	AB=0.958;AC=48;AF=0.857;AN=56;BaseQRankSum=1.129;DP=733;FS=0.000;HRun=0;HaplotypeScore=193.5300;InbreedingCoeff=0.2440;MQ=55.72;MQ0=6;MQRankSum=0.835;QD=6.35;ReadPosRankSum=1.066;VQSLOD=3.5123;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:31,2:36:4.46:72,4,0	1/1:7,0:8:3.01:33,3,0	0/1:42,0:21:3.67:4,0,4	0/1:37,0:21:47.19:47,0,49	0/1:10,0:8:0:0,0,0	1/1:11,0:12:6:90,6,0	1/1:51,0:50:27.60:327,28,0	1/1:24,0:24:23.92:180,24,0	1/1:26,2:29:15.92:206,16,0	1/1:23,4:28:38.48:400,38,0	1/1:12,4:16:11.78:228,12,0	1/1:14,0:37:6.02:102,6,0	1/1:29,4:34:6.40:541,6,0	1/1:26,2:31:28.87:323,29,0	0/1:16,5:21:35.09:219,0,35	0/0:20,0:20:36.12:0,36,563	1/1:32,0:30:8.91:71,9,0	1/1:11,0:24:8.96:138,9,0	1/1:20,0:20:23.74:299,24,0	1/1:9,15:27:9.52:94,10,0	1/1:32,18:52:16.14:127,16,0	1/1:19,0:19:11.90:134,12,0	0/1:13,0:13:18.94:19,0,23	1/1:24,0:24:5.52:45,6,0	0/1:14,0:14:0:0,0,0	1/1:23,0:24:37.46:433,37,0	1/1:8,14:24:21.42:334,21,0	1/1:13,0:11:11.44:56,11,0
chr10	58397519	.	T	TGTGTGTGTGTGTGTGC	9157.89	PASS	AB=1.000;AC=40;AF=0.714;AN=56;BaseQRankSum=0.726;DP=751;FS=12.180;HRun=0;HaplotypeScore=290.0642;InbreedingCoeff=-0.0542;MQ=49.29;MQ0=14;MQRankSum=-0.619;QD=13.12;ReadPosRankSum=5.011;VQSLOD=1.8725;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:39,0:36:16.35:306,16,0	1/1:4,0:4:3.01:34,3,0	0/0:31,0:9:2.17:0,2,43	0/1:40,0:16:42.18:42,0,98	0/1:9,0:7:0:0,0,0	0/1:13,0:13:37.42:117,0,37	0/1:57,0:56:99:270,0,184	1/1:26,0:26:36.08:279,36,0	1/1:28,0:28:27.92:380,28,0	1/1:28,0:25:53.61:1252,54,0	1/1:17,0:17:11.68:228,12,0	0/1:32,0:31:54.84:325,0,55	1/1:33,0:33:16.75:660,17,0	0/1:32,0:32:27.92:309,0,28	0/1:17,0:17:6.99:266,0,7	0/0:22,0:22:57.07:0,57,1135	0/1:34,0:31:75.45:75,0,149	0/1:25,0:24:48.80:189,0,49	1/1:16,8:21:41.66:925,42,0	1/1:27,0:27:14:145,14,0	1/1:58,0:56:28.92:325,29,0	0/1:18,0:18:8.51:157,0,9	0/1:14,0:14:9.93:10,0,89	0/1:29,0:29:99:140,0,101	1/1:7,11:22:3.01:203,3,0	1/1:7,17:33:70.50:1411,71,0	1/1:20,0:20:23.96:624,24,0	1/1:15,0:13:35.50:485,35,0
chr10	58397529	.	TGC	T	890.95	PASS	AB=0.971;AC=17;AF=0.304;AN=56;BaseQRankSum=4.086;DP=729;FS=2.654;HRun=0;HaplotypeScore=180.7925;InbreedingCoeff=-0.2953;MQ=47.80;MQ0=16;MQRankSum=-1.618;QD=2.07;ReadPosRankSum=-1.723;VQSLOD=2.4886;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:41,0:38:34.16:34,0,119	0/1:3,1:4:15.99:53,0,16	0/0:31,0:13:0.46:0,0,99	0/1:41,0:14:40.02:40,0,114	0/0:10,0:8:8.79:0,9,70	0/1:14,0:14:0.82:1,0,32	0/1:56,0:55:99:195,0,316	0/1:26,0:26:99:198,0,162	0/0:26,0:26:10.50:0,10,182	0/1:30,0:27:29.10:29,0,386	0/1:18,1:20:23.82:24,0,66	0/0:30,0:29:19.83:0,20,123	0/1:31,3:34:99:157,0,135	0/1:28,1:29:99:104,0,124	0/0:20,1:21:8.55:0,9,210	0/0:24,0:24:68.72:0,69,890	0/1:32,0:29:59.70:60,0,81	0/1:20,0:19:27.70:28,0,100	0/0:18,0:15:17.65:0,18,270	0/1:26,0:26:14.40:14,0,81	0/0:54,0:52:0.91:0,1,280	1/1:16,0:16:11.85:85,12,0	0/1:12,1:13:1.74:2,0,85	0/1:28,0:28:22.27:22,0,160	0/0:22,0:20:11.93:0,12,90	0/0:28,0:28:8.67:0,9,336	0/0:20,0:20:29.70:0,30,254	0/0:15,0:13:19.92:0,20,267
chr10	58397659	.	TTCTCTCTCTCTCTCTC	T	1251.34	PASS	AB=0.818;AC=11;AF=0.229;AN=48;BaseQRankSum=5.111;DP=546;FS=2.711;HRun=0;HaplotypeScore=199.4157;InbreedingCoeff=0.5974;MQ=71.25;MQ0=22;MQRankSum=-3.971;QD=12.27;ReadPosRankSum=0.934;VQSLOD=2.6215;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:24:15.94:0,16,669	0/0:9,0:9:6.02:0,6,395	./.	0/0:47,0:20:2.22:0,2,7	./.	0/0:12,0:11:15.04:0,15,219	1/1:21,5:25:9.03:388,9,0	0/0:33,0:33:22.88:0,23,634	0/0:21,0:21:30.10:0,30,1459	0/0:19,0:18:14.26:0,14,396	./.	0/1:14,0:18:30.46:202,0,30	0/0:14,0:13:10.57:0,11,405	0/0:20,0:19:18.06:0,18,1195	0/0:14,0:14:9.03:0,9,442	./.	0/0:23,0:26:21.07:0,21,1122	1/1:11,0:11:3.01:63,3,0	0/0:26,0:25:18.95:0,19,778	0/0:17,0:16:3.01:0,3,126	0/0:24,0:24:15.04:0,15,648	1/1:16,2:18:6.02:260,6,0	1/1:11,3:14:3.01:130,3,0	1/1:9,6:15:9.03:349,9,0	0/0:14,0:14:12.04:0,12,620	0/0:19,0:20:25.75:0,26,953	0/0:11,0:11:9.09:0,9,256	0/0:14,0:14:12.04:0,12,714
chr10	58398892	.	A	AGT	627.11	PASS	AB=0.952;AC=3;AF=0.054;AN=56;BaseQRankSum=-6.114;DP=715;FS=0.883;HRun=0;HaplotypeScore=87.3656;InbreedingCoeff=0.5698;MQ=74.72;MQ0=0;MQRankSum=-0.137;QD=9.80;ReadPosRankSum=-0.492;VQSLOD=2.8271;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,105,1232	0/0:12,0:12:33.09:0,33,386	0/0:37,0:32:57.05:0,57,614	0/0:31,0:28:38.46:0,38,433	0/0:27,0:27:60.18:0,60,728	0/0:16,0:16:39.09:0,39,450	0/0:28,0:28:60.18:0,60,728	0/0:22,0:22:48.13:0,48,563	0/0:24,0:24:57.17:0,57,692	0/0:24,0:24:57.16:0,57,675	0/0:14,0:14:36.10:0,36,425	0/0:23,0:23:60.15:0,60,692	0/0:29,0:29:72.21:0,72,863	0/0:23,0:23:48.08:0,48,526	0/0:31,0:31:66.17:0,66,768	1/1:2,19:24:11.75:690,12,0	0/0:34,0:34:63.19:0,63,763	0/0:23,0:23:57.14:0,57,674	0/0:17,0:17:18.04:0,18,208	0/0:19,0:19:45.13:0,45,535	0/1:35,2:40:36.74:37,0,968	0/0:23,0:24:53.96:0,54,610	0/0:24,0:24:57.12:0,57,643	0/0:34,0:36:72.05:0,72,851	0/0:24,0:25:53.96:0,54,607	0/0:27,1:28:26.79:0,27,809	0/0:35,0:35:90.26:0,90,1079	0/0:4,0:4:6.02:0,6,73
chr10	58399134	.	CT	C	16188.19	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=12.907;DP=710;FS=3.310;HRun=3;HaplotypeScore=70.1345;InbreedingCoeff=0.9942;MQ=92.99;MQ0=1;MQRankSum=-5.674;QD=35.04;ReadPosRankSum=3.345;VQSLOD=5.6361;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,43:44:99:1599,129,0	1/1:0,7:7:18.06:223,18,0	0/0:26,0:25:69.22:0,69,958	0/0:34,0:34:96.07:0,96,1304	1/1:2,22:24:66.21:818,66,0	0/0:19,0:19:54.18:0,54,777	0/0:24,0:24:72.23:0,72,1018	1/1:1,34:35:99:1214,102,0	1/1:0,25:25:69.22:855,69,0	1/1:0,25:25:72.18:838,72,0	1/1:1,15:16:42.13:520,42,0	0/0:23,0:23:66.21:0,66,933	1/1:1,26:27:78.24:965,78,0	1/1:0,22:22:66.21:818,66,0	1/1:0,35:35:96.30:1190,96,0	0/0:22,0:22:66.21:0,66,933	1/1:1,36:37:99:1301,105,0	0/0:24,0:24:69.19:0,69,969	1/1:0,19:19:57.17:695,57,0	1/1:0,20:20:60.19:742,60,0	1/1:1,45:46:99:1599,129,0	0/0:21,0:21:57.18:0,57,803	0/0:17,0:17:48.16:0,48,691	0/0:38,0:37:99:0,108,1535	1/1:0,21:21:60.19:744,60,0	1/1:0,31:31:93.28:1139,93,0	1/1:0,23:23:63.20:780,63,0	1/1:0,5:5:12.04:149,12,0
chr10	58400614	.	CT	C	10147.15	PASS	AB=0.815;AC=51;AF=0.911;AN=56;BaseQRankSum=-1.390;DP=619;FS=6.524;HRun=11;HaplotypeScore=67.2603;InbreedingCoeff=0.3145;MQ=72.18;MQ0=0;MQRankSum=0.980;QD=16.88;ReadPosRankSum=2.194;VQSLOD=5.8506;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,26:31:6.99:459,7,0	1/1:4,8:12:22.99:178,23,0	0/1:10,0:11:9.24:9,0,119	0/1:15,0:13:44.35:44,0,68	1/1:6,26:34:78.72:611,79,0	1/1:4,21:25:50.93:419,51,0	1/1:5,12:18:0.86:214,1,0	1/1:5,23:28:67.42:539,67,0	1/1:0,16:16:44.95:370,45,0	1/1:8,21:30:60.99:480,61,0	1/1:2,23:25:59.38:476,59,0	1/1:3,13:17:37.98:301,38,0	1/1:0,11:11:32.96:271,33,0	1/1:4,13:17:35.94:296,36,0	1/1:1,18:19:18.96:362,19,0	0/0:13,0:17:26.65:0,27,179	1/1:1,20:21:47.93:394,48,0	1/1:6,20:26:53.92:443,54,0	1/1:7,19:28:60.94:473,61,0	1/1:3,27:31:82.91:669,83,0	1/1:6,13:19:35.94:296,36,0	1/1:5,17:25:25.04:380,25,0	1/1:5,21:26:27.79:433,28,0	0/1:2,16:18:16.23:297,0,16	1/1:4,18:23:17.99:343,18,0	1/1:6,24:30:71.90:591,72,0	1/1:6,28:36:72.70:578,73,0	1/1:0,9:9:26.97:222,27,0
chr10	58402174	.	GAC	G	1524.03	PASS	AB=0.988;AC=24;AF=0.462;AN=52;BaseQRankSum=-6.016;DP=694;FS=18.031;HRun=0;HaplotypeScore=120.8006;InbreedingCoeff=-0.0470;MQ=65.21;MQ0=15;MQRankSum=2.026;QD=3.59;ReadPosRankSum=4.480;VQSLOD=1.0897;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:42,0:40:35.62:248,36,0	1/1:6,0:6:2.88:33,3,0	./.	0/0:52,0:42:3.01:0,3,40	1/1:32,0:28:3:26,3,0	0/0:21,0:20:17.64:0,18,142	0/0:34,0:31:14.10:0,14,96	0/1:27,0:25:10.85:11,0,89	0/1:18,1:17:38.95:111,0,39	0/1:18,0:17:18.71:151,0,19	./.	0/0:21,0:21:23.73:0,24,175	0/1:13,1:13:12.38:112,0,12	0/1:33,1:30:40.68:206,0,41	1/1:24,1:24:8.21:172,8,0	0/1:22,0:22:18.35:18,0,132	0/1:28,0:25:9.88:10,0,246	0/1:34,0:33:2.94:3,0,357	0/1:14,0:13:19.33:104,0,19	0/1:22,0:21:16.65:155,0,17	1/1:16,14:30:0.47:1,0,0	0/0:17,0:11:11.98:0,12,99	0/0:17,0:18:11.86:0,12,88	0/0:33,0:40:53.02:0,53,362	0/1:21,0:19:12.40:12,0,57	1/1:21,0:20:11.01:210,11,0	0/1:16,0:15:29.19:101,0,29	0/0:3,0:3:2.98:0,3,21
chr10	58402208	.	CACACAGAG	C	813.08	PASS	AB=1.000;AC=14;AF=0.259;AN=54;BaseQRankSum=-4.472;DP=648;FS=23.016;HRun=0;HaplotypeScore=168.5062;InbreedingCoeff=-0.0737;MQ=46.86;MQ0=41;MQRankSum=2.962;QD=2.44;ReadPosRankSum=-1.812;VQSLOD=0.9378;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:46,0:42:33.36:467,33,0	0/0:5,0:5:7.74:0,8,80	./.	0/0:4,0:3:6:0,6,85	1/1:6,21:22:2.98:27,3,0	0/1:18,0:17:36.11:36,0,218	0/0:34,0:28:21.27:0,21,247	0/0:30,0:28:28.48:0,28,292	0/0:20,0:18:2.13:0,2,270	0/1:23,0:19:59.42:59,0,298	0/0:13,0:11:3.01:0,3,48	0/1:23,0:20:4.18:4,0,343	0/1:20,0:19:33.52:34,0,154	0/1:33,0:29:99:110,0,275	0/0:33,0:32:21.28:0,21,485	0/1:27,0:27:18.50:18,0,383	0/0:27,0:23:38.79:0,39,603	0/1:34,0:30:67.07:67,0,574	0/1:19,0:16:34.27:34,0,242	0/0:23,0:20:15.03:0,15,207	0/1:38,0:34:12.46:12,0,135	0/0:22,0:15:12.04:0,12,198	0/0:19,0:19:12.02:0,12,169	0/0:47,0:45:28.62:0,29,643	0/0:18,0:15:21.54:0,22,358	0/1:25,0:22:95.41:95,0,277	0/0:17,0:15:13.85:0,14,167	0/0:3,0:3:3.01:0,3,67
chr10	58402212	.	CAGAGAGAG	C	746.47	PASS	AB=0.855;AC=14;AF=0.280;AN=50;BaseQRankSum=0.989;DP=638;FS=1.546;HRun=0;HaplotypeScore=177.3396;InbreedingCoeff=0.5195;MQ=46.45;MQ0=44;MQRankSum=-0.089;QD=2.80;ReadPosRankSum=1.562;VQSLOD=2.5877;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:45,0:41:7.77:8,0,39	0/0:5,0:5:8.53:0,9,161	./.	./.	1/1:27,0:22:1.80:5,2,0	1/1:17,0:17:11.98:153,12,0	1/1:29,2:26:5.14:47,5,0	0/1:31,0:28:43.82:110,0,44	0/0:20,0:18:27.48:0,27,472	0/0:22,0:16:39.57:0,40,652	0/0:18,0:16:9.03:0,9,225	0/1:12,9:19:2.30:80,0,2	0/0:21,0:20:18.79:0,19,373	0/0:32,0:29:28.99:0,29,503	0/0:33,0:32:39.12:0,39,972	0/0:27,0:27:13.56:0,14,113	0/0:27,0:24:23.81:0,24,473	0/1:19,11:26:3.80:186,0,4	0/0:20,0:17:38.97:0,39,733	0/0:23,0:20:18.52:0,19,431	0/0:34,0:30:8.95:0,9,295	./.	1/1:7,10:18:2.75:26,3,0	1/1:24,19:41:29.76:284,30,0	0/0:18,0:15:21.07:0,21,560	0/0:28,0:24:50.61:0,51,908	0/0:18,0:16:17.91:0,18,267	0/0:3,0:3:6.02:0,6,189
chr10	58402269	.	A	AGACAGA	4829.46	PASS	AB=1.000;AC=30;AF=0.577;AN=52;BaseQRankSum=-5.199;DP=627;FS=4.963;HRun=0;HaplotypeScore=126.6902;InbreedingCoeff=0.7335;MQ=63.46;MQ0=25;MQRankSum=-0.673;QD=13.02;ReadPosRankSum=-0.707;VQSLOD=3.8502;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:11.98:0,12,97	1/1:13,0:12:17.96:242,18,0	0/0:32,0:20:3.01:0,3,44	0/1:37,0:28:3.97:13,0,4	0/0:15,0:14:14.97:0,15,122	0/0:12,0:12:8.86:0,9,79	0/0:25,0:23:26.29:0,26,155	1/1:40,0:38:29.64:200,30,0	1/1:10,5:16:18.41:191,18,0	1/1:15,0:13:17.52:215,18,0	0/1:15,0:14:13.31:163,0,13	0/0:20,0:19:14.78:0,15,110	1/1:20,0:20:12.91:289,13,0	1/1:25,0:25:23.50:336,24,0	1/1:35,0:33:45.03:855,45,0	./.	1/1:26,0:24:26.94:396,27,0	0/0:20,0:16:23.67:0,24,203	1/1:28,0:26:24.20:311,24,0	1/1:17,0:16:20.96:316,21,0	1/1:25,0:23:14.38:312,14,0	0/0:16,0:15:8.79:0,9,52	0/0:15,0:15:5.54:0,6,34	0/0:24,0:22:3.82:0,4,55	1/1:25,0:25:23.99:448,24,0	1/1:31,0:29:30.01:519,30,0	./.	1/1:3,0:3:2.99:23,3,0
chr10	58403083	.	CT	C	2612.06	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=8.972;DP=574;FS=7.657;HRun=4;HaplotypeScore=60.7601;InbreedingCoeff=0.9385;MQ=66.45;MQ0=0;MQRankSum=1.024;QD=28.09;ReadPosRankSum=0.881;VQSLOD=2.9422;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,108,1494	0/0:17,0:17:51.17:0,51,714	0/0:11,0:11:27.08:0,27,352	0/1:8,0:8:2.72:3,0,220	0/0:26,0:26:72.24:0,72,1007	1/1:0,15:15:33.10:396,33,0	1/1:0,15:15:42.13:504,42,0	0/0:38,0:38:99:0,108,1480	0/0:19,0:19:51.17:0,51,714	0/0:28,0:28:84.27:0,84,1156	0/0:27,0:27:69.23:0,69,965	1/1:0,10:10:30.09:360,30,0	0/0:19,0:19:51.17:0,51,713	0/0:28,0:28:72.23:0,72,992	0/0:23,0:22:60.20:0,60,839	0/0:19,0:19:51.17:0,51,714	0/0:32,0:32:90.27:0,90,1239	1/1:0,11:11:30.09:360,30,0	0/0:22,0:22:57.13:0,57,758	0/0:18,0:18:54.18:0,54,755	0/0:12,0:12:36.12:0,36,501	1/1:0,7:7:21.06:252,21,0	1/1:0,16:16:48.15:576,48,0	1/1:0,11:11:30.09:360,30,0	0/0:32,0:32:87.24:0,87,1182	0/0:30,0:30:87.29:0,87,1218	0/0:30,0:30:84.27:0,84,1158	0/0:13,0:13:39.13:0,39,546
chr10	58403365	.	TTGAGACAG	T	27171.84	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=9.289;DP=488;FS=1.152;HRun=0;HaplotypeScore=145.6696;InbreedingCoeff=0.9380;MQ=77.57;MQ0=0;MQRankSum=-10.592;QD=63.78;ReadPosRankSum=5.352;VQSLOD=4.8897;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,25:30:54.19:1523,54,0	1/1:0,12:12:33.11:931,33,0	0/0:18,0:18:48.16:0,48,1894	0/0:20,0:20:57.20:0,57,2054	1/1:1,26:27:63.22:1769,63,0	1/1:1,17:18:48.16:1355,48,0	1/1:2,19:18:42.14:1185,42,0	1/1:2,19:21:57.20:1527,57,0	1/1:2,11:13:27.09:762,27,0	1/1:0,14:14:42.14:1185,42,0	1/1:1,12:13:36.12:1008,36,0	1/1:1,14:13:36.12:1016,36,0	1/1:0,15:12:30.10:847,30,0	1/1:2,20:20:57.18:1518,57,0	1/1:0,15:15:42.14:1185,42,0	0/0:24,0:23:63.22:0,63,2773	1/1:5,12:16:24.08:678,24,0	1/1:2,8:9:18.06:483,18,0	1/1:2,4:6:12.04:339,12,0	1/1:2,16:18:42.14:1185,42,0	1/1:0,9:9:12.04:339,12,0	1/1:1,16:16:48.16:1354,48,0	1/1:3,18:19:38.96:1100,39,0	1/1:1,14:15:21.07:593,21,0	1/1:1,19:20:54.19:1524,54,0	1/1:1,18:19:54.16:1442,54,0	1/1:3,30:30:78.27:2155,78,0	1/1:0,5:5:6.02:169,6,0
chr10	58404299	.	C	CTT	35444.55	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-9.845;DP=706;FS=12.824;HRun=1;HaplotypeScore=67.5205;InbreedingCoeff=0.9996;MQ=87.78;MQ0=3;MQRankSum=-11.523;QD=54.11;ReadPosRankSum=6.618;VQSLOD=3.1919;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,38:38:99:2213,111,0	1/1:0,17:17:51.18:1036,51,0	0/0:26,0:26:75.19:0,75,1120	0/0:25,0:25:65.38:0,65,1088	1/1:1,31:32:93.20:1783,93,0	1/1:1,23:23:63.22:1280,63,0	1/1:1,25:26:63.22:1259,63,0	1/1:1,34:36:99:2048,105,0	1/1:2,21:23:57.15:1117,57,0	1/1:1,21:23:66.23:1329,66,0	1/1:0,21:21:57.20:1158,57,0	1/1:2,22:24:60.21:1219,60,0	1/1:1,30:31:81.28:1641,81,0	1/1:0,28:29:78.27:1585,78,0	1/1:0,30:30:78.27:1585,78,0	1/1:1,20:21:60.21:1219,60,0	1/1:2,26:28:66.18:1278,66,0	1/1:2,10:13:36.12:727,36,0	1/1:1,11:12:36.12:722,36,0	1/1:1,35:35:99:1882,102,0	1/1:0,24:25:66.16:1298,66,0	1/1:0,33:32:93.23:1808,93,0	1/1:0,23:25:59.90:1219,60,0	1/1:1,20:21:54.19:1097,54,0	1/1:0,20:21:54.19:1097,54,0	1/1:0,31:32:96.29:1832,96,0	1/1:0,24:24:69.24:1402,69,0	1/1:0,10:10:30.10:610,30,0
chr10	58405392	.	GA	G	15368.84	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=1.576;DP=716;FS=0.000;HRun=8;HaplotypeScore=70.4413;InbreedingCoeff=0.9995;MQ=79.10;MQ0=0;MQRankSum=-5.562;QD=23.61;ReadPosRankSum=2.489;VQSLOD=5.5811;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,24:26:60.09:579,60,0	1/1:0,15:15:39.06:376,39,0	0/0:19,0:19:34.29:0,34,348	0/0:18,1:19:38.59:0,39,415	1/1:1,24:25:65.47:616,65,0	1/1:3,21:24:57.09:550,57,0	1/1:4,18:22:33.05:319,33,0	1/1:8,32:40:96.05:892,96,0	1/1:2,27:29:72.11:695,72,0	1/1:7,31:38:87.08:830,87,0	1/1:1,22:23:63.10:608,63,0	1/1:0,29:29:75.12:724,75,0	1/1:1,19:20:48.08:463,48,0	1/1:3,18:21:51.07:492,51,0	1/1:3,32:35:87.13:840,87,0	0/0:27,0:27:66.20:0,66,797	1/1:2,16:18:48.08:463,48,0	1/1:2,23:25:54.08:521,54,0	1/1:3,22:26:67.43:597,67,0	1/1:1,36:37:99:1002,105,0	1/1:3,14:17:39.06:376,39,0	1/1:3,32:35:87.13:840,87,0	1/1:2,17:19:51.08:492,51,0	1/1:6,14:20:39.06:376,39,0	1/1:1,25:26:66.11:637,66,0	1/1:4,29:33:87.12:834,87,0	1/1:2,35:37:99:955,99,0	1/1:0,11:11:30.05:290,30,0
chr10	58405976	.	T	TC	27496.70	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-8.547;DP=670;FS=2.087;HRun=0;HaplotypeScore=59.8149;InbreedingCoeff=0.9994;MQ=79.82;MQ0=0;MQRankSum=-9.552;QD=43.85;ReadPosRankSum=4.600;VQSLOD=5.2425;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,23:25:44.66:895,45,0	1/1:1,14:15:42.14:671,42,0	0/0:27,0:27:72.10:0,72,960	0/0:16,0:15:45.15:0,45,629	1/1:0,27:27:78.27:1247,78,0	1/1:0,21:21:57.19:911,57,0	1/1:0,17:17:36.12:575,36,0	1/1:2,31:33:93.04:1413,93,0	1/1:0,20:20:57.19:911,57,0	1/1:1,25:26:75.21:1140,75,0	1/1:0,28:28:81.28:1294,81,0	1/1:0,17:17:51.17:815,51,0	1/1:1,22:23:63.21:1006,63,0	1/1:0,27:27:72.25:1151,72,0	1/1:0,24:24:66.23:1055,66,0	1/1:0,16:16:48.16:767,48,0	1/1:0,29:29:87.30:1390,87,0	1/1:0,10:10:30.10:479,30,0	1/1:0,25:25:75.20:1122,75,0	1/1:0,34:34:96.33:1511,96,0	1/1:0,20:20:57.19:911,57,0	1/1:0,26:26:75.26:1199,75,0	1/1:0,25:25:60.13:929,60,0	1/1:0,27:27:75.13:1199,75,0	1/1:0,36:36:96.33:1535,96,0	1/1:0,35:35:99:1598,102,0	1/1:0,30:29:81.28:1294,81,0	1/1:0,11:11:30.10:479,30,0
chr10	58406552	.	C	CTCTG	3934.36	PASS	AB=0.998;AC=26;AF=0.464;AN=56;BaseQRankSum=16.339;DP=700;FS=7.349;HRun=0;HaplotypeScore=343.0482;InbreedingCoeff=-0.7057;MQ=68.86;MQ0=1;MQRankSum=-14.167;QD=6.69;ReadPosRankSum=8.696;VQSLOD=0.6602;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:40,0:40:76.67:170,0,77	0/1:11,0:11:55.35:55,0,106	0/0:31,0:28:70.67:0,71,1124	0/0:60,0:49:99:0,103,1476	0/1:29,0:29:13.49:13,0,477	0/1:33,0:33:99:164,0,405	0/1:14,0:14:85.06:85,0,134	0/1:33,0:33:90.34:90,0,938	0/1:27,0:27:24.88:211,0,25	0/1:35,0:35:99:312,0,453	0/1:17,0:17:58.72:59,0,174	0/1:28,0:28:17.91:258,0,18	0/1:36,0:36:99:270,0,159	0/1:22,0:22:77.19:130,0,77	0/1:40,0:40:99:256,0,215	1/1:11,14:24:34.36:1002,34,0	0/1:19,0:18:56.74:57,0,336	0/1:6,0:6:13.59:14,0,141	0/0:20,0:20:13.47:0,13,681	0/1:27,0:27:99:100,0,175	0/1:15,0:15:9.74:10,0,282	0/1:30,0:30:99:214,0,115	0/1:9,0:9:43.74:44,0,60	0/1:16,0:16:42.66:43,0,43	0/1:10,0:10:54.59:55,0,144	0/1:30,0:30:99:244,0,641	0/1:25,0:25:72.40:72,0,565	0/1:10,0:10:8.84:9,0,303
chr10	58406562	.	C	CTGTCTCTCTG	33340.55	PASS	AB=1.000;AC=51;AF=0.911;AN=56;BaseQRankSum=1.963;DP=702;FS=0.000;HRun=0;HaplotypeScore=315.9212;InbreedingCoeff=0.7020;MQ=71.03;MQ0=1;MQRankSum=-10.929;QD=55.38;ReadPosRankSum=7.315;VQSLOD=3.4989;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:23,15:39:36.11:1720,36,0	1/1:9,4:13:21:707,21,0	0/0:37,0:34:63.41:0,63,1311	0/0:63,0:51:84.16:0,84,1636	1/1:22,5:27:18.22:609,18,0	1/1:16,11:27:48.13:1898,48,0	1/1:9,6:15:24.04:996,24,0	1/1:34,0:34:77.78:1025,78,0	1/1:16,9:26:41.97:1769,42,0	1/1:21,17:38:99:3124,102,0	1/1:11,5:16:11.99:616,12,0	1/1:14,16:30:51.12:2268,51,0	1/1:16,17:33:60.17:2732,60,0	1/1:17,7:25:27.07:1254,27,0	1/1:26,17:43:51.10:2622,51,0	1/1:11,0:24:39.03:1515,39,0	1/1:12,4:16:18.03:664,18,0	0/1:5,0:5:18.23:19,0,18	1/1:19,2:21:44.82:873,45,0	1/1:19,8:27:24.02:1004,24,0	1/1:11,2:13:5.64:176,6,0	1/1:3,24:27:39.13:2003,39,0	1/1:7,4:11:9.47:463,9,0	1/1:10,5:15:11.95:513,12,0	1/1:7,5:12:18.03:664,18,0	1/1:19,13:32:74.83:2466,75,0	1/1:18,4:22:42.09:1192,42,0	1/1:6,2:8:20.89:446,21,0
chr10	58406586	.	TTGTC	T	14685.86	PASS	AB=0.667;AC=51;AF=0.911;AN=56;BaseQRankSum=10.204;DP=572;FS=0.496;HRun=0;HaplotypeScore=328.4767;InbreedingCoeff=0.8112;MQ=77.38;MQ0=0;MQRankSum=-11.879;QD=30.60;ReadPosRankSum=1.844;VQSLOD=4.1877;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,21:29:38.87:516,39,0	1/1:1,11:12:27.05:456,27,0	0/0:36,0:36:95.90:0,96,2240	0/0:56,0:46:74.83:0,75,2013	1/1:2,14:16:21.21:142,21,0	1/1:5,16:21:48.08:789,48,0	1/1:0,12:12:33.03:472,33,0	1/1:5,25:29:72.24:1267,72,0	1/1:2,23:25:63.13:1001,63,0	1/1:9,22:31:63.22:1157,63,0	1/1:3,8:11:14.33:126,14,0	1/1:4,25:29:69.19:1151,69,0	1/1:4,25:29:62.96:922,63,0	1/1:2,24:26:47.81:643,48,0	1/1:7,28:35:53.65:727,54,0	1/1:2,22:24:63.21:1074,63,0	1/1:2,8:9:11.79:140,12,0	0/1:1,1:2:1.31:50,0,1	1/1:2,10:12:30.05:486,30,0	1/1:1,21:22:29.95:494,30,0	1/1:3,6:9:11.67:148,12,0	1/1:4,12:16:35.78:359,36,0	1/1:0,12:12:24.64:214,25,0	1/1:0,10:10:17.84:170,18,0	1/1:0,11:11:24.04:379,24,0	1/1:3,23:26:63.22:1157,63,0	1/1:3,11:13:26.26:425,26,0	1/1:2,4:6:12.04:221,12,0
chr10	58406669	.	C	CTG	5269.72	PASS	AB=0.972;AC=45;AF=0.804;AN=56;BaseQRankSum=-0.609;DP=549;FS=61.958;HRun=0;HaplotypeScore=161.5255;InbreedingCoeff=0.4221;MQ=40.66;MQ0=28;MQRankSum=1.875;QD=12.14;ReadPosRankSum=2.380;VQSLOD=2.3976;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:17,2:17:20.95:242,21,0	0/1:10,1:11:11.36:11,0,26	0/0:30,0:6:11.87:0,12,150	0/0:50,0:11:17.93:0,18,240	1/1:14,1:15:12.03:130,12,0	1/1:16,0:15:8.86:103,9,0	1/1:15,1:16:14.82:213,15,0	1/1:2,28:29:74:910,74,0	1/1:19,4:23:11.91:318,12,0	1/1:20,4:23:59.74:592,60,0	1/1:16,1:15:6:59,6,0	1/1:12,2:14:17.85:209,18,0	1/1:18,3:19:8.40:270,8,0	1/1:20,2:21:17.68:192,18,0	1/1:18,2:20:12.02:135,12,0	0/0:24,0:23:10.29:0,10,99	1/1:18,0:12:0.02:141,0,0	0/1:11,0:10:50.46:133,0,50	1/1:15,0:15:2.61:226,3,0	1/1:24,3:27:11.43:111,11,0	1/1:11,2:12:11.77:118,12,0	1/1:4,18:22:2.86:57,3,0	0/0:11,0:11:0:0,0,0	1/1:19,1:19:14.90:171,15,0	1/1:18,1:20:18.05:211,18,0	1/1:10,5:14:41.97:513,42,0	1/1:15,2:16:15.53:168,16,0	0/1:7,0:5:9.35:36,0,9
chr10	58406687	.	C	CTG	263.52	PASS	AB=0.952;AC=15;AF=0.278;AN=54;BaseQRankSum=-4.397;DP=511;FS=29.869;HRun=0;HaplotypeScore=141.1305;InbreedingCoeff=-0.3127;MQ=37.90;MQ0=40;MQRankSum=-2.158;QD=1.01;ReadPosRankSum=-2.978;VQSLOD=0.0516;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:21:8.42:8,0,95	0/0:14,0:13:10.24:0,10,44	./.	0/0:13,0:3:1.70:0,2,26	0/0:16,0:16:11.95:0,12,93	0/0:24,0:21:10.43:0,10,91	0/0:16,0:15:5.41:0,5,29	0/0:26,0:26:30.08:0,30,296	0/1:18,2:20:3.40:3,0,190	0/1:23,0:22:24.14:24,0,201	0/0:12,2:11:6:0,6,60	0/1:12,0:12:9.70:10,0,51	0/1:16,2:14:27.98:28,0,104	0/0:16,1:16:23.49:0,23,162	0/1:14,3:17:30.26:30,0,89	0/0:23,0:22:8.80:0,9,127	0/1:21,0:15:34.78:35,0,60	0/1:15,1:15:35.99:36,0,149	0/1:16,0:16:48.07:48,0,111	0/0:20,1:20:11.84:0,12,82	0/1:14,1:14:37.88:38,0,67	0/0:23,0:22:2.84:0,3,25	1/1:12,0:10:2.22:7,2,0	0/1:32,0:28:18.91:19,0,136	0/0:23,2:24:17.90:0,18,136	0/1:15,1:13:16.26:16,0,182	0/1:15,2:16:87.27:104,0,87	0/0:8,0:5:3.53:0,4,47
chr10	58406901	.	CCCCTGTGGG	C	24184.33	PASS	AB=0.675;AC=46;AF=0.821;AN=56;BaseQRankSum=14.476;DP=513;FS=0.000;HRun=0;HaplotypeScore=272.4355;InbreedingCoeff=0.2388;MQ=65.23;MQ0=0;MQRankSum=-11.368;QD=50.38;ReadPosRankSum=9.084;VQSLOD=3.6030;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,16:25:42.14:973,42,0	1/1:0,8:8:24.08:594,24,0	0/0:19,0:20:59.99:0,60,2620	0/0:13,0:13:39.13:0,39,1548	1/1:0,12:15:34.98:825,35,0	1/1:2,11:13:36.08:836,36,0	0/1:11,11:22:58.66:766,0,59	0/1:13,12:25:81.49:927,0,81	0/1:4,9:13:22.67:629,0,23	1/1:8,18:26:11:1344,11,0	1/1:6,16:22:30.38:1087,30,0	1/1:6,12:18:10:860,10,0	1/1:0,26:31:81.28:1966,81,0	0/1:5,19:24:4.39:1366,0,4	1/1:4,18:22:36.53:1310,37,0	0/1:29,1:30:34.80:35,0,3791	1/1:1,7:8:20.52:518,21,0	1/1:2,5:7:14.27:378,14,0	0/1:5,11:16:32.25:796,0,32	1/1:3,20:23:66.17:1573,66,0	1/1:3,11:14:34:798,34,0	1/1:5,14:19:36.22:881,36,0	1/1:0,18:21:54.12:1234,54,0	1/1:0,10:16:27.09:608,27,0	1/1:2,11:13:1.16:777,1,0	1/1:2,19:21:46.81:1360,47,0	1/1:0,21:25:63.22:1519,63,0	1/1:0,3:3:9.03:224,9,0
chr10	58406904	.	CT	C	2493.74	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=11.582;DP=435;FS=0.551;HRun=1;HaplotypeScore=262.2848;InbreedingCoeff=0.9467;MQ=70.82;MQ0=0;MQRankSum=-11.881;QD=6.74;ReadPosRankSum=5.117;VQSLOD=0.6970;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:17:28.46:89,28,0	1/1:8,0:8:17.76:56,18,0	0/0:21,0:21:63.17:0,63,915	0/0:13,0:13:33.06:0,33,436	1/1:13,0:13:27.03:106,27,0	1/1:12,0:12:27.32:93,27,0	1/1:11,0:11:24.42:77,24,0	1/1:12,1:13:29.57:101,30,0	1/1:10,0:10:19.98:63,20,0	1/1:20,0:20:40.42:130,40,0	1/1:16,0:18:34.88:159,35,0	1/1:14,0:14:29.58:102,30,0	1/1:27,0:27:60.63:199,61,0	1/1:21,0:21:45.11:150,45,0	1/1:19,0:19:42.91:144,43,0	0/0:31,0:31:67.63:0,68,1226	1/1:7,0:7:15.54:49,16,0	1/1:5,1:6:14.07:55,14,0	1/1:14,0:14:24.42:77,24,0	1/1:22,0:22:49.70:165,50,0	1/1:11,1:12:28.76:125,29,0	1/1:14,1:15:29.58:102,30,0	1/1:20,0:20:38.92:134,39,0	1/1:12,0:12:20.52:86,21,0	1/1:11,0:11:24.42:77,24,0	1/1:20,1:21:42.87:142,43,0	1/1:24,0:24:45.82:144,46,0	1/1:3,0:3:6.66:21,7,0
chr10	58406911	.	ATTTGG	A	15389.66	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=11.481;DP=417;FS=0.531;HRun=0;HaplotypeScore=242.6816;InbreedingCoeff=0.9730;MQ=76.16;MQ0=0;MQRankSum=-12.232;QD=43.85;ReadPosRankSum=6.239;VQSLOD=4.5880;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,16:16:38.87:580,39,0	1/1:0,8:8:24.08:379,24,0	0/0:21,0:21:63.21:0,63,1914	0/0:15,0:15:45.15:0,45,1264	1/1:0,12:12:33.08:487,33,0	1/1:1,11:12:33.11:521,33,0	1/1:0,11:11:33.11:521,33,0	1/1:0,12:12:36.12:595,36,0	1/1:1,9:10:30.09:451,30,0	1/1:1,18:19:51.17:850,51,0	1/1:3,16:19:48.12:680,48,0	1/1:0,12:12:36.12:568,36,0	1/1:1,26:27:80.94:1241,81,0	1/1:0,19:19:57.19:890,57,0	1/1:1,18:19:57.18:873,57,0	0/0:29,1:30:40.04:0,40,2708	1/1:0,7:7:21.07:331,21,0	1/1:3,5:8:17.85:259,18,0	1/1:0,11:11:33.11:547,33,0	1/1:0,21:21:63.21:990,63,0	1/1:0,11:11:33.11:500,33,0	1/1:0,14:14:36.12:560,36,0	1/1:0,18:18:50.76:759,51,0	1/1:0,10:10:24.05:347,24,0	1/1:1,11:12:33.11:520,33,0	1/1:0,19:19:54.18:883,54,0	1/1:0,21:21:57.19:915,57,0	1/1:0,3:3:9.03:144,9,0
chr10	58407821	.	T	TGA	6032.01	PASS	AB=0.959;AC=48;AF=0.857;AN=56;BaseQRankSum=2.519;DP=599;FS=36.234;HRun=0;HaplotypeScore=214.3959;InbreedingCoeff=0.4509;MQ=57.22;MQ0=9;MQRankSum=-2.193;QD=10.87;ReadPosRankSum=4.883;VQSLOD=3.1317;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,22:32:7.51:69,8,0	1/1:9,3:12:32.97:317,33,0	0/0:21,0:15:35.69:0,36,413	0/0:23,0:18:35.23:0,35,410	1/1:20,0:20:17.98:151,18,0	0/1:29,4:33:1.46:353,0,1	1/1:24,1:25:38.07:339,38,0	1/1:21,0:20:30.36:371,30,0	1/1:24,0:23:31.90:240,32,0	1/1:21,0:20:45.64:402,46,0	1/1:10,0:10:8.80:76,9,0	1/1:25,4:29:27.75:403,28,0	1/1:18,0:17:33.91:225,34,0	1/1:25,0:24:23.28:158,23,0	1/1:29,0:29:46.94:372,47,0	0/1:19,0:19:5.29:5,0,223	1/1:6,21:25:26.98:321,27,0	0/1:16,1:17:9:144,0,9	1/1:12,0:10:15.37:124,15,0	1/1:15,0:15:1.62:55,2,0	1/1:24,0:23:14.85:206,15,0	1/1:19,5:23:34.41:339,34,0	1/1:8,3:11:10.54:111,11,0	1/1:32,0:31:38.05:307,38,0	1/1:18,0:17:11.47:89,11,0	1/1:25,0:24:54.14:478,54,0	1/1:24,0:23:40.90:319,41,0	0/1:7,0:6:4.81:59,0,5
chr10	58407845	.	T	TGC	1031.04	PASS	AB=0.967;AC=14;AF=0.250;AN=56;BaseQRankSum=0.642;DP=635;FS=8.480;HRun=0;HaplotypeScore=201.4490;InbreedingCoeff=-0.0825;MQ=45.58;MQ0=14;MQRankSum=0.402;QD=4.04;ReadPosRankSum=4.334;VQSLOD=1.7188;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:33:3.36:0,3,70	0/0:10,0:10:2.82:0,3,102	0/0:25,0:12:29.76:0,30,256	0/0:31,0:9:20.92:0,21,187	0/0:21,0:21:19.43:0,19,125	0/0:31,0:31:12.30:0,12,172	0/0:28,0:28:23.97:0,24,280	0/0:22,0:20:48.59:0,49,360	0/1:21,0:20:17.62:18,0,114	0/1:14,13:26:99:160,0,171	0/1:15,0:15:49.35:90,0,49	0/0:32,0:32:28.50:0,28,267	0/1:18,0:17:39.74:40,0,95	0/1:27,0:26:16.50:17,0,146	0/1:24,0:24:82.24:82,0,119	0/0:20,0:20:16.52:0,17,213	0/0:32,0:30:22.87:0,23,238	0/0:20,0:20:0.21:0,0,192	0/1:9,0:7:16.49:16,0,72	1/1:17,0:17:25.80:246,26,0	0/1:23,0:22:89.66:101,0,90	0/0:25,0:24:4.22:0,4,119	0/0:15,0:15:6.58:0,7,93	0/0:28,0:27:19.97:0,20,138	1/1:21,0:20:2.72:109,3,0	0/1:30,0:29:99:203,0,139	0/1:21,0:20:94.47:105,0,94	0/0:6,0:4:11.81:0,12,76
chr10	58407849	.	T	TGC	896.72	PASS	AB=0.948;AC=9;AF=0.161;AN=56;BaseQRankSum=1.674;DP=647;FS=15.285;HRun=0;HaplotypeScore=205.1405;InbreedingCoeff=0.3163;MQ=46.20;MQ0=13;MQRankSum=-1.066;QD=5.31;ReadPosRankSum=6.658;VQSLOD=1.0978;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:32:8.13:0,8,141	0/1:7,3:10:15:127,0,15	0/0:25,0:13:38.76:0,39,356	0/0:35,0:12:24.79:0,25,221	0/0:20,0:20:13.28:0,13,111	0/1:31,0:32:67.62:68,0,145	0/0:29,0:29:20.30:0,20,299	1/1:22,0:20:33.04:308,33,0	0/0:22,0:21:26.75:0,27,199	0/0:29,0:27:41.18:0,41,476	0/0:16,0:16:26.96:0,27,222	0/1:31,0:31:2.65:3,0,283	0/0:21,0:20:38.64:0,39,282	0/0:27,0:26:25.34:0,25,239	0/0:23,0:23:23.66:0,24,199	0/0:21,0:21:19.59:0,20,246	1/1:27,4:29:12.42:381,12,0	0/0:19,0:19:5.45:0,5,194	0/0:11,0:9:25.43:0,25,191	0/0:18,0:18:15.25:0,15,147	0/0:21,0:20:26.63:0,27,210	0/1:25,0:24:97.85:98,0,124	0/1:18,0:18:58.45:58,0,74	0/0:29,0:29:26:0,26,186	0/0:22,0:20:22.81:0,23,199	0/0:30,0:29:67.83:0,68,579	0/0:22,0:21:37.01:0,37,275	0/0:5,0:3:8.88:0,9,57
chr10	58408535	.	CTG	C	392.92	PASS	AB=0.941;AC=31;AF=0.596;AN=52;BaseQRankSum=3.038;DP=165;FS=3.646;HRun=0;HaplotypeScore=52.4157;InbreedingCoeff=0.3351;MQ=80.15;MQ0=0;MQRankSum=0.351;QD=3.33;ReadPosRankSum=4.584;VQSLOD=0.9735;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:13:3.02:9,3,0	./.	0/0:5,0:4:12.04:0,12,232	0/0:8,0:8:17.59:0,18,282	0/1:8,0:8:10.79:11,0,28	1/1:6,0:6:6.34:14,6,0	1/1:5,1:6:4.84:41,5,0	1/1:7,0:7:4.45:189,4,0	1/1:7,0:7:6.71:16,7,0	1/1:2,0:2:3.63:9,4,0	0/1:7,2:9:16.28:49,0,16	0/0:4,0:4:3.47:0,3,44	0/1:6,0:6:1.60:2,0,2	0/0:8,0:8:0.38:0,0,4	0/0:9,0:9:2.34:0,2,42	0/0:6,0:6:18.06:0,18,338	1/1:7,0:7:2.84:6,3,0	1/1:2,1:3:5.14:49,5,0	1/1:2,0:2:2.80:6,3,0	0/0:3,0:3:6.42:0,6,43	0/1:9,0:8:3.25:3,0,9	1/1:7,0:7:3.55:8,4,0	1/1:3,0:3:1.72:4,2,0	0/1:7,1:8:5.47:38,0,5	0/0:3,0:3:3.75:0,4,31	1/1:7,1:8:10.42:38,10,0	1/1:5,2:7:5.15:49,5,0	./.
chr10	58408536	.	T	TC	4335.72	PASS	AC=46;AF=0.885;AN=52;BaseQRankSum=-1.050;DP=161;FS=9.152;HRun=5;HaplotypeScore=35.3907;InbreedingCoeff=0.6607;MQ=78.36;MQ0=0;MQRankSum=-1.038;QD=30.75;ReadPosRankSum=3.672;VQSLOD=4.5646;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,13:13:30.10:412,30,0	./.	0/0:5,0:4:12.04:0,12,168	0/0:8,0:8:18.05:0,18,230	1/1:0,8:8:20.98:263,21,0	1/1:1,6:7:18.06:251,18,0	1/1:2,5:7:12.04:154,12,0	1/1:7,0:7:17.96:181,18,0	1/1:0,7:7:21.07:289,21,0	1/1:0,2:2:6.02:85,6,0	1/1:3,3:7:14.21:224,14,0	1/1:2,3:5:2.68:76,3,0	1/1:0,6:6:15.05:200,15,0	1/1:1,5:6:18.05:231,18,0	1/1:0,7:7:18.06:244,18,0	0/0:6,0:6:18.04:0,18,233	1/1:0,7:7:18.06:247,18,0	1/1:1,1:3:8.99:103,9,0	1/1:0,1:2:6.02:85,6,0	1/1:1,2:3:2.62:39,3,0	1/1:1,7:7:15.94:210,16,0	1/1:0,7:7:11.84:164,12,0	1/1:0,3:3:6.02:82,6,0	1/1:2,6:8:19.88:247,20,0	1/1:2,1:3:0.42:37,0,0	1/1:2,6:8:24.04:306,24,0	1/1:2,5:7:15.05:206,15,0	./.
chr10	58408607	.	T	TG	2777.78	PASS	AB=0.658;AC=24;AF=0.444;AN=54;BaseQRankSum=-4.871;DP=300;FS=6.478;HRun=9;HaplotypeScore=51.5135;InbreedingCoeff=0.5279;MQ=83.89;MQ0=0;MQRankSum=0.426;QD=18.40;ReadPosRankSum=-3.261;VQSLOD=2.5200;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:32.83:0,33,271	0/1:1,5:6:8.01:147,0,8	0/0:13,0:14:16.35:0,16,128	0/0:10,0:9:5.92:0,6,66	0/0:18,0:18:44.98:0,45,390	0/0:18,0:18:44.98:0,45,390	0/0:9,0:9:14.99:0,15,130	1/1:1,8:9:24.06:258,24,0	0/1:6,8:14:19.03:258,0,19	1/1:3,5:8:15.04:166,15,0	0/1:4,4:8:10.80:118,0,11	0/0:12,0:12:29.99:0,30,260	1/1:2,3:5:9.02:100,9,0	1/1:4,9:13:29.96:300,30,0	1/1:2,12:14:30.08:332,30,0	0/0:0,0:11:21.93:0,22,63	1/1:3,5:8:18.03:189,18,0	0/0:11,0:11:32.99:0,33,287	0/1:4,2:6:17.02:57,0,17	1/1:3,11:15:10:325,10,0	0/1:3,3:6:40.07:54,0,40	0/0:12,0:12:32.98:0,33,282	0/0:7,0:7:17.98:0,18,153	0/0:12,0:12:23.12:0,23,207	1/1:2,6:8:18.05:199,18,0	1/1:10,8:18:24.05:265,24,0	0/1:7,6:13:22.10:211,0,22	./.
chr10	58408623	.	AT	A	407.08	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.032;DP=339;FS=2.426;HRun=4;HaplotypeScore=52.4916;InbreedingCoeff=0.8131;MQ=82.41;MQ0=0;MQRankSum=-3.192;QD=27.14;ReadPosRankSum=0.486;VQSLOD=2.5367;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:54.16:0,54,736	0/0:9,0:9:27.09:0,27,374	0/0:12,0:12:5.34:0,5,336	0/0:13,0:12:27.76:0,28,395	0/0:23,0:23:69.23:0,69,963	0/0:18,0:18:51.17:0,51,714	0/0:7,0:7:21.05:0,21,275	0/0:16,0:16:39.13:0,39,545	0/0:15,0:15:42.12:0,42,556	0/0:12,0:11:33.10:0,33,448	0/0:11,0:11:33.11:0,33,461	0/0:14,0:14:36.12:0,36,502	0/0:4,0:4:12.04:0,12,167	0/0:15,0:15:39.13:0,39,545	0/0:13,0:13:33.11:0,33,461	1/1:0,15:15:42.13:502,42,0	0/0:7,0:7:21.07:0,21,290	0/0:14,0:14:42.14:0,42,587	0/0:8,0:8:24.08:0,24,336	0/0:17,0:17:48.16:0,48,672	0/0:7,0:7:21.03:0,21,256	0/0:14,0:14:42.14:0,42,587	0/0:9,0:9:27.09:0,27,378	0/0:11,0:11:30.06:0,30,398	0/0:9,0:9:27.09:0,27,378	0/0:14,0:14:36.11:0,36,489	0/0:10,0:10:30.09:0,30,404	0/0:3,0:3:9.02:0,9,102
chr10	58409387	.	T	TACACAC	4264.72	PASS	AB=1.000;AC=43;AF=0.896;AN=48;BaseQRankSum=1.466;DP=410;FS=9.355;HRun=0;HaplotypeScore=122.8869;InbreedingCoeff=0.3962;MQ=59.13;MQ0=7;MQRankSum=0.810;QD=13.12;ReadPosRankSum=1.015;VQSLOD=3.4517;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:27,0:16:9.03:0,9,165	0/0:22,0:11:3.48:0,3,59	1/1:16,0:17:2.99:24,3,0	1/1:25,3:29:23.29:491,23,0	1/1:17,0:17:4.55:54,5,0	1/1:26,0:24:34.81:496,35,0	1/1:12,0:12:2.93:44,3,0	1/1:12,0:11:12.04:267,12,0	1/1:16,0:14:2.94:33,3,0	1/1:12,1:14:6.05:169,6,0	1/1:12,0:13:15.05:326,15,0	1/1:10,0:11:2.89:72,3,0	1/1:16,0:16:5.99:73,6,0	1/1:11,0:11:17.96:307,18,0	1/1:15,0:15:6.01:106,6,0	1/1:9,0:9:15.05:332,15,0	1/1:16,0:15:18.63:324,19,0	1/1:13,0:12:2.65:38,3,0	./.	0/1:5,0:5:0:0,0,0	./.	1/1:7,4:12:3.01:97,3,0	1/1:15,0:14:12.03:196,12,0	1/1:22,0:21:30.02:528,30,0	1/1:13,0:12:0.42:1,0,0	1/1:8,0:8:12.04:285,12,0
chr10	58409419	.	C	CACACACACACATAT	6341.34	PASS	AB=1.000;AC=38;AF=0.731;AN=52;BaseQRankSum=-3.571;DP=390;FS=15.855;HRun=0;HaplotypeScore=140.5805;InbreedingCoeff=0.0604;MQ=44.78;MQ0=10;MQRankSum=-3.743;QD=18.22;ReadPosRankSum=0.541;VQSLOD=3.1305;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:20:3.01:63,3,0	1/1:4,0:3:6.02:98,6,0	0/0:15,0:5:11.87:0,12,231	0/1:16,0:5:8.36:8,0,108	1/1:18,0:18:2.99:24,3,0	0/1:28,0:28:79.10:379,0,79	0/1:13,0:13:41.97:42,0,46	1/1:37,0:34:99:1894,100,0	./.	1/1:10,0:8:20.89:385,21,0	1/1:11,0:9:2.93:65,3,0	0/1:15,0:15:64.93:88,0,65	1/1:12,0:12:13.07:268,13,0	1/1:10,0:10:6.47:127,6,0	0/1:14,0:14:47.10:47,0,68	0/1:11,0:11:57.95:130,0,58	1/1:4,11:23:12.03:400,12,0	0/1:15,0:15:74.54:265,0,75	1/1:17,0:14:35.25:516,35,0	1/1:10,0:9:2.73:39,3,0	./.	0/0:5,0:5:5.93:0,6,39	0/0:4,0:4:8.90:0,9,59	0/1:11,0:11:21.13:21,0,70	1/1:17,0:16:12.03:196,12,0	1/1:19,0:17:47.97:798,48,0	1/1:11,0:10:6.53:181,7,0	1/1:5,0:5:14.88:308,15,0
chr10	58409423	.	TAG	T	1583.89	PASS	AB=0.983;AC=32;AF=0.667;AN=48;BaseQRankSum=-2.276;DP=353;FS=0.735;HRun=0;HaplotypeScore=80.9246;InbreedingCoeff=0.2404;MQ=51.02;MQ0=9;MQRankSum=0.789;QD=5.95;ReadPosRankSum=0.886;VQSLOD=3.0305;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	0/0:4,0:3:9.03:0,9,139	0/0:15,0:5:12:0,12,170	0/1:19,0:7:6.69:7,0,109	./.	0/1:26,1:27:4.59:294,0,5	1/1:8,0:8:11.63:158,12,0	0/1:32,1:32:69.03:69,0,709	./.	0/1:9,0:7:17.90:23,0,18	1/1:10,0:8:1.06:4,1,0	1/1:13,1:14:23.33:227,23,0	1/1:9,0:9:2.57:29,3,0	1/1:7,0:7:1.25:3,1,0	1/1:11,0:11:2.60:5,3,0	0/0:9,0:9:5.79:0,6,107	0/1:19,0:19:5.82:6,0,20	0/1:12,1:13:6.08:271,0,6	1/1:16,1:14:13.43:76,13,0	0/1:11,0:10:0:0,0,0	1/1:8,0:8:2.04:6,2,0	1/1:5,0:5:5.76:89,6,0	1/1:3,0:3:9.03:133,9,0	1/1:10,0:10:17.40:202,17,0	0/1:15,0:14:0:0,0,0	1/1:18,0:16:11.80:121,12,0	./.	0/0:4,0:4:3.40:0,3,18
chr10	58409427	.	T	TAG	1356.41	PASS	AB=0.822;AC=19;AF=0.380;AN=50;BaseQRankSum=-2.714;DP=356;FS=2.322;HRun=0;HaplotypeScore=83.6326;InbreedingCoeff=0.5904;MQ=53.68;MQ0=8;MQRankSum=-1.105;QD=10.68;ReadPosRankSum=2.397;VQSLOD=3.4487;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/0:4,0:3:9.02:0,9,106	0/0:15,0:4:8.82:0,9,129	0/1:17,1:7:3.83:4,0,118	./.	0/0:27,0:27:37.84:0,38,336	0/0:7,0:7:9.02:0,9,97	0/0:35,0:34:79.74:0,80,924	./.	1/1:5,4:7:17.52:192,18,0	1/1:2,9:9:2.81:58,3,0	0/0:14,0:14:17.14:0,17,168	1/1:3,7:10:5.48:49,5,0	1/1:6,0:6:2.99:48,3,0	0/1:12,0:12:7.40:15,0,7	0/0:9,0:9:9.01:0,9,115	0/0:20,0:20:8.24:0,8,73	0/0:12,0:12:32.12:0,32,281	1/1:7,10:15:16.98:440,17,0	0/0:2,8:9:0:0,0,0	1/1:1,8:9:0.47:1,0,0	0/0:6,0:6:6.02:0,6,65	0/0:4,0:4:12:0,12,117	0/0:10,0:10:17.23:0,17,161	0/1:1,12:12:0:0,0,0	1/1:4,15:17:39.39:610,39,0	0/0:1,7:7:0:0,0,0	1/1:1,2:3:6.02:96,6,0
chr10	58409685	.	C	CAT	3513.21	PASS	AB=1.000;AC=48;AF=0.857;AN=56;BaseQRankSum=0.058;DP=288;FS=12.896;HRun=0;HaplotypeScore=63.5111;InbreedingCoeff=0.3596;MQ=56.55;MQ0=18;MQRankSum=2.438;QD=14.58;ReadPosRankSum=2.819;VQSLOD=2.4868;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:17,2:17:20.98:202,21,0	0/0:4,0:3:0:0,0,0	0/0:22,0:8:23.77:0,24,185	0/0:21,0:6:7.23:0,7,60	1/1:8,0:8:8.07:56,8,0	1/1:10,0:11:23.86:173,24,0	1/1:14,0:14:24.40:198,24,0	1/1:32,0:31:8.85:504,9,0	1/1:6,2:8:20.94:201,21,0	0/1:8,0:7:13.54:48,0,14	1/1:4,0:4:2.97:20,3,0	1/1:5,0:5:4.22:48,4,0	1/1:8,1:9:14.98:129,15,0	1/1:0,6:6:6.02:114,6,0	1/1:6,2:7:17.48:163,17,0	1/1:2,0:6:1.69:24,2,0	1/1:16,3:17:35.87:353,36,0	1/1:13,0:11:25.89:186,26,0	1/1:14,0:14:36.04:327,36,0	1/1:5,0:5:8.74:62,9,0	1/1:10,1:8:14.98:123,15,0	1/1:1,0:1:3:25,3,0	1/1:2,0:1:1.25:3,1,0	1/1:5,0:5:1.38:40,1,0	1/1:8,1:8:18.01:190,18,0	1/1:10,0:10:23.73:198,24,0	1/1:10,0:10:9.65:91,10,0	0/1:4,0:4:17.35:35,0,17
chr10	58409687	.	T	TGC	216.28	PASS	AB=0.919;AC=13;AF=0.232;AN=56;BaseQRankSum=2.190;DP=289;FS=17.283;HRun=0;HaplotypeScore=73.3808;InbreedingCoeff=-0.0010;MQ=56.22;MQ0=19;MQRankSum=-1.183;QD=2.10;ReadPosRankSum=2.228;VQSLOD=-0.3925;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:18,2:18:44.38:48,0,44	1/1:4,0:3:2.90:16,3,0	0/0:22,0:8:17.19:0,17,198	0/0:21,0:6:14.65:0,15,109	0/1:7,0:7:3.85:4,0,32	0/0:10,0:10:24.52:0,25,157	0/0:14,0:14:20.49:0,20,137	0/0:34,0:33:75.82:0,76,397	0/1:6,1:7:50.52:60,0,51	0/0:8,0:7:13.62:0,14,73	0/0:5,0:5:2.65:0,3,12	0/0:5,0:5:8.94:0,9,73	0/1:9,1:10:8.29:8,0,56	1/1:5,0:5:5.92:40,6,0	0/1:5,2:7:34.89:84,0,35	0/0:6,0:6:11.97:0,12,97	0/1:18,1:17:32:32,0,91	0/0:13,0:11:25.65:0,26,157	0/0:15,0:14:18.21:0,18,103	0/0:5,0:5:8.35:0,8,46	0/0:11,0:8:16.62:0,17,85	0/0:1,0:1:2.68:0,3,11	0/0:2,0:1:2.99:0,3,23	0/0:4,0:4:5.73:0,6,35	0/1:8,1:8:5.85:41,0,6	0/1:10,0:10:9.47:9,0,72	0/0:10,0:10:9.99:0,10,43	0/1:4,0:4:17.45:17,0,21
chr10	58409729	.	T	TA	725.18	PASS	AB=0.906;AC=24;AF=0.444;AN=54;BaseQRankSum=0.815;DP=232;FS=0.940;HRun=0;HaplotypeScore=47.2589;InbreedingCoeff=0.1455;MQ=48.55;MQ0=22;MQRankSum=-0.912;QD=5.67;ReadPosRankSum=0.332;VQSLOD=3.1915;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:13:5.49:0,5,46	0/1:4,0:3:1.65:15,0,2	0/0:19,0:3:2.98:0,3,41	0/0:21,0:1:3.01:0,3,41	0/1:3,0:3:0.56:15,0,1	1/1:3,3:6:11.60:69,12,0	1/1:8,0:8:2.86:24,3,0	0/1:25,0:25:99:406,0,132	0/0:3,0:3:6.02:0,6,67	0/1:4,1:3:4.07:4,0,10	1/1:1,3:4:0.27:26,0,0	1/1:5,0:5:2.80:58,3,0	0/0:8,0:8:3:0,3,27	0/0:2,0:2:5.99:0,6,49	0/1:3,3:6:6.47:6,0,85	0/0:8,0:8:12.96:0,13,117	0/1:14,0:13:23.47:23,0,117	1/1:11,0:11:8.95:73,9,0	0/1:12,0:10:90.22:104,0,90	0/0:2,0:2:3.01:0,3,41	1/1:4,2:4:4.46:21,4,0	./.	1/1:3,0:2:2.50:9,2,0	0/0:5,0:4:5.05:0,5,40	0/0:14,0:14:8.60:0,9,66	0/1:6,3:8:10.25:10,0,112	1/1:7,0:7:2.60:10,3,0	0/0:8,0:7:0.47:0,0,1
chr10	58409730	.	G	GTAA	1881.30	PASS	AB=1.000;AC=28;AF=0.519;AN=54;BaseQRankSum=-0.400;DP=228;FS=5.182;HRun=0;HaplotypeScore=50.4048;InbreedingCoeff=0.1233;MQ=48.85;MQ0=22;MQRankSum=0.221;QD=12.71;ReadPosRankSum=2.150;VQSLOD=2.5068;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:11:2.54:0,3,32	1/1:1,3:3:6.01:94,6,0	0/0:19,0:3:6.49:0,6,101	0/0:21,0:1:3.01:0,3,51	1/1:0,3:3:6.02:92,6,0	1/1:6,0:6:12.03:147,12,0	0/1:8,0:8:3.92:22,0,4	0/1:22,0:22:56.92:647,0,57	0/0:3,0:3:5.04:0,5,38	0/1:5,0:3:11.70:29,0,12	1/1:3,0:4:9.03:123,9,0	1/1:5,0:5:4.21:78,4,0	0/0:8,0:8:5.03:0,5,29	0/0:2,0:2:5.88:0,6,37	0/1:6,0:6:49.67:65,0,50	0/0:8,0:8:14.66:0,15,167	0/1:15,0:14:40.64:41,0,69	1/1:11,0:11:9.02:136,9,0	0/1:12,0:10:28.49:222,0,28	0/0:2,0:2:3.01:0,3,31	1/1:6,0:4:5.93:58,6,0	./.	1/1:3,0:2:2.88:15,3,0	0/0:5,0:4:4.21:0,4,23	0/1:14,0:14:11.95:12,0,24	0/1:9,0:8:88.25:90,0,88	1/1:7,0:7:3.01:37,3,0	1/1:1,7:7:6.02:136,6,0
chr10	58409735	.	A	ATATAG	5107.25	PASS	AB=1.000;AC=43;AF=0.860;AN=50;BaseQRankSum=-1.230;DP=227;FS=7.231;HRun=0;HaplotypeScore=40.1214;InbreedingCoeff=0.3382;MQ=50.63;MQ0=16;MQRankSum=-0.259;QD=30.04;ReadPosRankSum=-0.696;VQSLOD=3.1053;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,6:10:8.94:126,9,0	1/1:4,0:3:6.02:159,6,0	0/0:19,0:3:6.02:0,6,120	0/0:22,0:2:2.97:0,3,20	1/1:5,0:5:6.02:162,6,0	1/1:7,0:7:15.03:325,15,0	1/1:8,0:8:6:71,6,0	1/1:3,18:26:69.07:1639,69,0	./.	1/1:4,0:2:3.01:90,3,0	1/1:4,0:4:9.03:270,9,0	1/1:4,1:5:8.81:153,9,0	./.	1/1:2,0:2:2.92:17,3,0	1/1:8,0:8:9.02:190,9,0	0/0:8,0:8:9.03:0,9,180	1/1:6,6:14:8.98:197,9,0	1/1:3,10:14:9.03:229,9,0	1/1:2,7:9:24.06:610,24,0	1/1:1,0:1:3:25,3,0	1/1:3,0:3:6.02:180,6,0	./.	1/1:2,0:2:3.01:37,3,0	1/1:4,0:4:5.84:34,6,0	1/1:2,11:13:2.95:56,3,0	0/1:9,0:8:7.02:273,0,7	1/1:0,7:7:3.01:71,3,0	1/1:9,0:8:9:193,9,0
chr10	58409744	.	A	AGTATA	4773.68	PASS	AB=1.000;AC=43;AF=0.860;AN=50;BaseQRankSum=-1.381;DP=201;FS=7.424;HRun=0;HaplotypeScore=34.8189;InbreedingCoeff=0.3286;MQ=58.43;MQ0=8;MQRankSum=-0.367;QD=31.82;ReadPosRankSum=0.787;VQSLOD=2.8312;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,0:9:5.93:56,6,0	1/1:3,0:3:6.02:159,6,0	0/0:18,0:3:6.02:0,6,120	0/0:22,0:5:3.44:0,3,21	1/1:6,0:6:6.02:162,6,0	1/1:7,0:7:15.03:325,15,0	1/1:2,5:8:6:71,6,0	1/1:24,0:24:60.05:1432,60,0	./.	1/1:2,0:2:3.01:90,3,0	1/1:4,0:4:9.03:270,9,0	1/1:3,0:3:8.95:153,9,0	./.	1/1:1,0:1:2.92:17,3,0	1/1:5,0:5:9.02:190,9,0	0/0:6,0:6:9.03:0,9,180	1/1:11,0:11:5.97:108,6,0	1/1:16,0:16:9.03:229,9,0	1/1:8,0:8:21.07:588,21,0	1/1:1,0:1:3:25,3,0	1/1:3,0:3:5.88:180,6,0	./.	1/1:2,0:2:3.01:37,3,0	1/1:4,0:4:5.84:34,6,0	1/1:11,0:12:2.95:56,3,0	0/1:6,0:6:6.95:328,0,7	1/1:6,0:6:3.01:71,3,0	1/1:9,0:8:9:193,9,0
chr10	58411535	.	AC	A	291.87	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=1.811;DP=485;FS=6.303;HRun=6;HaplotypeScore=114.9449;InbreedingCoeff=0.9007;MQ=64.85;MQ0=0;MQRankSum=-1.632;QD=24.32;ReadPosRankSum=1.267;VQSLOD=2.5947;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:33.11:0,33,434	0/0:6,0:6:12.01:0,12,139	0/0:18,0:18:33.70:0,34,476	0/0:18,0:16:35.96:0,36,466	0/0:18,0:18:45.15:0,45,590	0/0:16,0:16:39.08:0,39,487	0/0:20,0:20:57.18:0,57,746	0/0:38,0:38:87.26:0,87,1114	0/0:14,0:14:39.08:0,39,489	0/0:23,0:23:56.61:0,57,695	0/0:17,0:17:39.13:0,39,511	0/0:22,0:22:60.20:0,60,788	0/0:21,0:21:57.19:0,57,747	0/0:18,0:18:42.09:0,42,526	0/0:22,0:22:66.21:0,66,867	1/1:0,12:12:36.09:387,36,0	0/0:14,0:14:39.13:0,39,512	0/0:5,0:5:15.04:0,15,187	0/0:19,0:19:57.15:0,57,730	0/0:30,0:30:78.14:0,78,982	0/0:16,0:16:38.87:0,39,511	0/0:18,0:18:48.15:0,48,614	0/0:24,0:24:51.08:0,51,644	0/0:16,0:16:39.13:0,39,508	0/0:8,0:8:21.07:0,21,276	0/0:18,0:18:48.13:0,48,599	0/0:17,0:17:48.15:0,48,625	0/0:5,0:5:9.03:0,9,114
chr10	58411812	.	ACTCTCTCT	A	590.65	PASS	AB=0.931;AC=24;AF=0.667;AN=36;BaseQRankSum=0.979;DP=543;FS=9.013;HRun=0;HaplotypeScore=130.7111;InbreedingCoeff=-0.0609;MQ=68.81;MQ0=18;MQRankSum=0.052;QD=1.99;ReadPosRankSum=2.237;VQSLOD=2.0257;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:33:12.38:0,12,200	./.	./.	./.	1/1:23,0:23:1.55:4,2,0	1/1:17,0:17:3.01:40,3,0	./.	0/0:30,0:30:3.48:0,3,42	1/1:11,0:11:9.50:146,9,0	0/1:24,0:26:24.49:66,0,24	./.	./.	./.	1/1:10,0:10:3.01:34,3,0	1/1:28,0:28:9.02:101,9,0	1/1:7,0:8:3.01:53,3,0	0/1:19,0:16:17.51:18,0,51	0/1:13,0:16:13.72:57,0,14	0/1:23,0:22:29.17:29,0,71	1/1:21,0:20:2.99:23,3,0	1/1:19,0:18:1.81:5,2,0	./.	./.	./.	1/1:15,0:15:3.01:73,3,0	0/1:30,0:35:27.07:27,0,194	0/1:24,0:22:34.36:34,0,202	0/0:15,0:15:3.01:0,3,49
chr10	58411867	.	CTGTGTG	C	5470	PASS	AB=0.850;AC=32;AF=0.615;AN=52;BaseQRankSum=-2.355;DP=434;FS=0.000;HRun=0;HaplotypeScore=119.0184;InbreedingCoeff=0.6091;MQ=43.37;MQ0=40;MQRankSum=2.639;QD=19.54;ReadPosRankSum=-0.505;VQSLOD=4.3444;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:25:39.48:0,39,887	0/0:4,0:4:3.01:0,3,51	0/0:3,0:1:3.01:0,3,71	0/0:4,0:3:5.33:0,5,97	0/0:21,0:17:23.98:0,24,568	1/1:20,0:20:7.30:66,7,0	1/1:19,0:15:7.74:43,8,0	0/0:19,0:15:24.08:0,24,479	0/1:12,9:21:44.46:96,0,44	1/1:20,0:16:36.12:719,36,0	1/1:11,0:10:9.03:184,9,0	1/1:13,0:12:8.54:76,9,0	1/1:14,0:14:36.12:684,36,0	1/1:15,0:14:24.06:455,24,0	1/1:21,0:21:36.49:730,36,0	0/0:10,0:10:2.68:0,3,11	0/0:26,0:22:0:0,0,0	0/0:12,0:10:2.84:0,3,14	1/1:14,0:11:6.02:111,6,0	1/1:17,0:16:24.06:454,24,0	1/1:12,0:10:15.05:309,15,0	./.	./.	0/1:18,0:16:0:0,0,0	1/1:6,0:5:3.01:62,3,0	1/1:29,0:28:39.09:787,39,0	1/1:22,0:20:33.09:633,33,0	1/1:7,0:5:3.01:62,3,0
chr10	58411890	.	TGTG	T	929.88	PASS	AB=0.948;AC=21;AF=0.375;AN=56;BaseQRankSum=10.282;DP=440;FS=10.301;HRun=0;HaplotypeScore=131.7699;InbreedingCoeff=-0.0784;MQ=54.81;MQ0=29;MQRankSum=1.643;QD=3.47;ReadPosRankSum=8.157;VQSLOD=0.7620;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:26:57.45:0,57,1117	0/0:6,0:6:3.01:0,3,63	0/0:17,0:9:24.55:0,25,333	0/0:17,0:10:26.94:0,27,372	0/0:20,0:16:30.03:0,30,622	1/1:5,4:9:4.30:86,4,0	0/1:8,6:13:3.52:49,0,4	0/0:19,0:14:36.05:0,36,663	0/0:22,0:22:13.77:0,14,246	0/1:19,0:20:99:112,0,171	0/1:16,0:15:17.52:18,0,129	1/1:8,3:11:12.73:163,13,0	0/1:15,0:15:56.55:68,0,57	0/1:17,0:16:55.87:56,0,135	0/1:23,0:23:93.60:94,0,174	0/0:11,0:11:6.02:0,6,84	0/0:18,0:13:3.01:0,3,37	1/1:5,0:4:1.55:4,2,0	0/1:15,0:13:4.90:5,0,358	0/1:23,0:23:50.77:51,0,239	0/1:12,0:10:38.94:39,0,83	0/1:14,6:19:7.17:76,0,7	0/0:3,4:7:6.94:0,7,27	1/1:13,2:14:8.90:60,9,0	0/0:7,0:6:2.45:0,2,121	0/1:23,0:24:99:124,0,275	0/1:21,0:19:81.90:82,0,158	0/1:6,0:4:4.47:4,0,35
chr10	58411894	.	TGTGTG	T	4361.23	PASS	AB=0.992;AC=26;AF=0.464;AN=56;BaseQRankSum=6.301;DP=427;FS=2.730;HRun=0;HaplotypeScore=129.2021;InbreedingCoeff=-0.1820;MQ=58.98;MQ0=26;MQRankSum=-1.883;QD=13.18;ReadPosRankSum=6.255;VQSLOD=3.8146;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:24:54.73:0,55,871	0/1:7,0:6:4.60:14,0,5	0/0:19,0:11:30.08:0,30,385	0/0:17,0:10:29.67:0,30,445	0/0:18,0:14:28.20:0,28,500	1/1:10,0:9:10.61:110,11,0	0/1:14,0:13:0.70:52,0,1	0/1:22,0:16:79.59:80,0,287	0/1:19,0:19:51.47:51,0,55	0/1:19,1:20:5.73:471,0,6	0/1:16,1:16:41.25:154,0,41	1/1:11,0:11:19.16:194,19,0	1/1:12,3:15:4.95:444,5,0	0/1:14,0:13:10.65:340,0,11	0/1:22,0:22:22.43:550,0,22	0/0:12,0:12:9.02:0,9,112	0/1:16,0:13:0:0,0,0	0/0:5,0:4:0.47:0,0,1	0/1:15,0:13:66.95:67,0,72	0/1:22,1:23:61.59:334,0,62	0/1:11,0:9:3.49:212,0,3	0/1:20,0:19:21.54:75,0,22	0/1:8,0:8:11.38:11,0,11	1/1:15,0:14:10.95:79,11,0	0/1:7,0:6:15.22:46,0,15	0/1:20,0:20:18.88:557,0,19	0/1:21,0:19:12.30:478,0,12	0/1:4,0:3:10.44:41,0,10
chr10	58411898	.	TG	T	1925.13	PASS	AB=0.954;AC=29;AF=0.518;AN=56;BaseQRankSum=7.778;DP=448;FS=2.604;HRun=1;HaplotypeScore=120.3583;InbreedingCoeff=-0.1633;MQ=62.70;MQ0=22;MQRankSum=-3.054;QD=5.41;ReadPosRankSum=3.972;VQSLOD=0.8424;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:48.87:0,49,228	1/1:7,0:6:5.96:44,6,0	0/0:21,0:13:36.10:0,36,409	0/0:18,0:11:32.47:0,32,329	0/0:19,0:16:31.99:0,32,144	1/1:11,0:10:8.90:73,9,0	1/1:15,0:15:5.58:63,6,0	0/1:25,0:19:24.58:262,0,25	0/1:20,0:20:23.88:24,0,51	0/1:18,2:20:22.06:129,0,22	0/1:18,0:17:36.22:36,0,51	1/1:11,0:11:15.57:130,16,0	0/1:13,2:15:2.91:123,0,3	0/1:12,2:13:19.92:118,0,20	0/1:21,3:24:22.25:213,0,22	0/0:12,0:12:9.02:0,9,106	0/1:17,0:15:0:0,0,0	1/1:6,0:5:7.81:53,8,0	0/1:17,0:15:31.77:32,0,77	0/1:24,1:25:76.18:132,0,76	0/1:11,0:9:10.63:69,0,11	0/1:22,0:21:15.55:118,0,16	0/1:10,0:10:10.19:14,0,10	1/1:16,0:15:10.95:79,11,0	0/1:7,0:6:6.66:7,0,25	0/1:19,2:21:16.47:217,0,16	0/1:18,1:19:14.51:145,0,15	0/1:4,1:4:10.51:13,0,11
chr10	58411899	.	G	GT	1079.51	PASS	AB=0.997;AC=28;AF=0.500;AN=56;BaseQRankSum=5.689;DP=468;FS=7.376;HRun=4;HaplotypeScore=133.5836;InbreedingCoeff=-0.1585;MQ=65.40;MQ0=21;MQRankSum=0.001;QD=2.81;ReadPosRankSum=3.551;VQSLOD=-0.3005;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:21,0:21:27.70:68,0,28	1/1:1,6:6:5.98:61,6,0	0/0:23,0:15:35.88:0,36,397	0/0:19,0:12:32.29:0,32,331	0/1:19,0:16:28.58:29,0,38	0/1:12,0:11:2.89:49,0,3	0/1:18,0:18:6.59:44,0,7	1/1:4,21:20:33.44:406,33,0	0/1:20,0:20:38.06:38,0,76	0/1:19,0:20:0.28:0,0,62	0/0:18,0:17:5.04:0,5,67	1/1:13,0:13:6.71:85,7,0	0/1:15,0:15:4.94:5,0,51	0/1:15,0:14:14.80:15,0,30	0/1:25,0:25:43.72:56,0,44	0/0:12,0:12:8.93:0,9,97	1/1:3,2:16:0.47:1,0,0	1/1:8,0:7:0.70:42,1,0	0/1:20,0:18:5.36:5,0,80	0/1:25,0:25:29.85:30,0,89	0/1:11,0:9:5.10:5,0,17	0/1:22,0:22:15.75:119,0,16	0/1:11,0:11:7.33:39,0,7	1/1:16,0:15:10.95:79,11,0	0/0:7,0:6:6.34:0,6,33	0/1:23,0:23:33.06:51,0,33	0/1:19,0:19:8.12:8,0,37	0/0:5,0:4:0.18:0,0,12
chr10	58415388	.	AT	A	925.94	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.369;DP=779;FS=2.391;HRun=5;HaplotypeScore=72.0270;InbreedingCoeff=0.9990;MQ=78.76;MQ0=0;MQRankSum=-1.573;QD=29.87;ReadPosRankSum=0.933;VQSLOD=4.2276;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,111,1480	0/0:17,0:17:45.15:0,45,615	0/0:24,0:24:66.21:0,66,851	0/0:20,0:20:53.17:0,53,606	0/0:32,0:32:93.31:0,93,1271	0/0:20,0:20:60.17:0,60,776	0/0:26,0:26:78.25:0,78,1052	0/0:58,0:58:99:0,163,2202	0/0:24,0:24:72.20:0,72,963	0/0:38,0:38:93.30:0,93,1259	0/0:22,0:22:60.17:0,60,774	0/0:28,0:28:75.24:0,75,1004	0/0:28,0:28:84.25:0,84,1116	0/0:28,0:28:78.24:0,78,1045	0/0:40,0:40:99:0,108,1461	1/1:0,31:31:90.26:1021,90,0	0/0:33,0:33:96.29:0,96,1292	0/0:11,0:11:30.10:0,30,410	0/0:17,0:17:45.13:0,45,586	0/0:34,0:34:99:0,99,1278	0/0:30,0:30:81.26:0,81,1091	0/0:26,0:26:75.24:0,75,1011	0/0:24,0:24:69.22:0,69,919	0/0:22,0:21:66.22:0,66,902	0/0:37,0:37:99:0,99,1338	0/0:28,0:28:81.24:0,81,1052	0/0:29,0:29:84.28:0,84,1147	0/0:10,0:10:30.10:0,30,410
chr10	58415499	.	GT	G	8537.64	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=7.606;DP=724;FS=16.086;HRun=9;HaplotypeScore=79.7816;InbreedingCoeff=0.9997;MQ=79.57;MQ0=0;MQRankSum=-1.523;QD=23.78;ReadPosRankSum=1.738;VQSLOD=4.0412;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:72.17:0,72,831	0/0:1,0:13:37.09:0,37,199	0/0:23,0:23:50.95:0,51,564	0/0:12,0:13:27.07:0,27,300	0/0:37,0:37:99:0,102,1177	0/0:30,0:31:84.07:0,84,940	0/0:29,0:29:72.21:0,72,831	0/0:5,0:42:99:0,102,532	1/1:1,24:26:65.33:603,65,0	1/1:5,41:46:99:1153,126,0	1/1:7,26:33:75.03:686,75,0	0/0:16,0:16:39.12:0,39,450	1/1:3,25:28:69.02:632,69,0	1/1:3,21:24:63.02:577,63,0	1/1:4,28:32:84.04:769,84,0	0/0:25,0:25:75.22:0,75,865	0/0:4,0:17:39.90:0,40,208	0/0:14,0:14:39.07:0,39,435	1/1:2,10:12:30.01:274,30,0	1/1:4,35:39:99:906,99,0	1/1:1,13:14:39.02:357,39,0	0/0:30,0:30:81.24:0,81,930	0/0:26,0:27:57.11:0,57,688	0/0:16,0:16:42.11:0,42,474	1/1:1,19:20:57.03:522,57,0	1/1:4,26:30:78.03:714,78,0	1/1:5,35:40:99:961,105,0	1/1:1,14:15:42.02:384,42,0
chr10	58416134	.	G	GGT	978.15	PASS	AB=0.966;AC=27;AF=0.540;AN=50;BaseQRankSum=-0.290;DP=561;FS=2.014;HRun=0;HaplotypeScore=143.5546;InbreedingCoeff=0.1438;MQ=57.98;MQ0=17;MQRankSum=0.110;QD=2.96;ReadPosRankSum=-1.271;VQSLOD=2.7582;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:34,0:34:8.71:53,9,0	1/1:4,0:5:2.12:14,2,0	./.	./.	1/1:17,2:19:8.93:87,9,0	0/0:11,0:11:3:0,3,32	0/0:30,0:29:3.40:0,3,77	0/0:23,0:21:2.27:0,2,19	1/1:15,1:16:5.99:63,6,0	0/1:21,2:21:10.90:149,0,11	1/1:18,0:15:5.98:67,6,0	0/0:21,0:21:9.02:0,9,97	0/1:18,1:19:20.42:71,0,20	1/1:26,2:27:1.83:156,2,0	1/1:22,2:25:11.97:108,12,0	0/0:10,0:12:5.68:0,6,28	0/1:23,0:23:9.45:9,0,56	1/1:11,0:10:5.57:21,6,0	0/1:14,0:13:6.19:16,0,6	1/1:20,0:20:2.96:42,3,0	0/0:39,1:39:3:0,3,29	0/1:21,0:21:7.29:7,0,54	0/0:18,0:18:2.94:0,3,27	0/0:21,0:20:5.71:0,6,61	0/1:16,1:17:8.15:42,0,8	1/1:17,1:15:11.41:87,11,0	0/1:17,1:17:46.31:137,0,46	./.
chr10	58416175	.	G	GTCTGTC	7963.03	PASS	AB=0.995;AC=40;AF=0.714;AN=56;BaseQRankSum=1.686;DP=554;FS=38.701;HRun=0;HaplotypeScore=196.7811;InbreedingCoeff=-0.0531;MQ=42.67;MQ0=20;MQRankSum=1.329;QD=15.23;ReadPosRankSum=3.867;VQSLOD=2.9019;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:34,0:32:16.94:310,0,17	1/1:4,3:7:6.02:83,6,0	0/0:19,0:11:33.10:0,33,563	0/0:12,0:9:21.07:0,21,371	1/1:22,0:22:26.92:377,27,0	0/1:11,0:10:9.41:44,0,9	1/1:24,0:23:15.79:411,16,0	1/1:27,0:24:52.88:794,53,0	0/1:14,0:14:30.60:121,0,31	0/1:25,0:21:6.08:611,0,6	1/1:18,0:15:17.80:168,18,0	0/1:16,0:17:7.46:59,0,7	1/1:25,0:24:40.53:527,41,0	1/1:23,0:22:35.73:488,36,0	1/1:23,0:23:14.71:535,15,0	1/1:9,0:9:5.70:212,6,0	1/1:7,13:20:4.42:314,4,0	0/1:15,0:14:28.39:243,0,28	1/1:20,0:18:24.74:548,25,0	1/1:23,0:22:8.75:270,9,0	0/1:32,0:31:21.09:246,0,21	0/1:25,0:25:29.56:121,0,30	1/1:20,0:19:11.42:156,11,0	0/1:19,0:17:3.36:19,0,3	0/1:20,0:19:21.16:279,0,21	1/1:18,0:17:37.55:503,38,0	0/1:25,0:24:49.87:392,0,50	0/1:7,0:4:10.91:134,0,11
chr10	58416223	.	ATG	A	531.62	PASS	AB=0.958;AC=7;AF=0.125;AN=56;BaseQRankSum=-3.461;DP=485;FS=0.000;HRun=0;HaplotypeScore=189.9542;InbreedingCoeff=0.7543;MQ=63.73;MQ0=1;MQRankSum=-0.804;QD=9.49;ReadPosRankSum=-3.930;VQSLOD=2.7323;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:33.10:0,33,531	1/1:2,1:3:3.01:39,3,0	0/0:14,0:13:17.94:0,18,218	0/1:22,0:21:23.39:23,0,226	0/0:27,0:27:60.12:0,60,941	0/0:17,0:17:48.16:0,48,786	0/0:19,0:19:39.12:0,39,628	1/1:8,8:15:30.03:335,30,0	0/0:12,0:12:28.32:0,28,433	0/0:22,0:22:60.15:0,60,976	0/0:16,0:16:30.08:0,30,482	0/0:11,0:11:21.07:0,21,349	0/0:21,0:21:62.01:0,62,996	0/0:20,0:20:48.10:0,48,752	0/0:21,0:21:51.16:0,51,826	0/0:11,0:11:20.94:0,21,357	1/1:3,11:13:21.07:273,21,0	0/0:10,0:10:27.09:0,27,459	0/0:15,0:15:38.34:0,38,599	0/0:20,0:20:48.16:0,48,808	0/0:16,0:16:36.05:0,36,555	0/0:23,0:23:42.14:0,42,705	0/0:29,0:29:66.23:0,66,1121	0/0:14,0:14:15.05:0,15,254	0/0:19,0:19:45.12:0,45,706	0/0:23,0:23:63.20:0,63,1017	0/0:24,0:24:59.70:0,60,941	0/0:4,0:4:12.04:0,12,204
chr10	58416243	.	GTA	G	7714.33	PASS	AB=0.900;AC=50;AF=0.926;AN=54;BaseQRankSum=-2.843;DP=443;FS=11.237;HRun=0;HaplotypeScore=146.5462;InbreedingCoeff=0.2020;MQ=66.07;MQ0=2;MQRankSum=-0.417;QD=17.82;ReadPosRankSum=3.793;VQSLOD=4.5794;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,10:14:18.06:227,18,0	./.	0/0:9,0:5:0.50:0,1,52	0/1:24,0:20:34.95:35,0,177	1/1:2,22:24:45.10:550,45,0	1/1:3,0:18:36.96:182,37,0	1/1:3,0:16:19.74:98,20,0	1/1:4,13:16:33.11:416,33,0	1/1:3,8:11:21.07:260,21,0	1/1:5,14:19:48.13:583,48,0	1/1:4,13:18:33.11:416,33,0	1/1:2,0:13:16.93:84,17,0	1/1:4,17:21:52.83:639,53,0	1/1:5,12:17:33.06:398,33,0	1/1:1,17:18:36.05:454,36,0	0/1:8,1:8:19.93:20,0,230	1/1:3,8:10:5.81:58,6,0	1/1:3,0:10:19.84:97,20,0	1/1:3,8:11:21.07:263,21,0	1/1:2,15:17:42.09:512,42,0	1/1:1,9:10:20.98:229,21,0	1/1:6,0:22:28.31:139,28,0	1/1:8,0:28:33.97:168,34,0	1/1:2,0:14:10.88:54,11,0	1/1:3,15:18:36.11:454,36,0	1/1:3,20:23:60.15:738,60,0	1/1:5,18:23:48.07:566,48,0	1/1:2,2:4:6.02:76,6,0
chr10	58416326	.	TGTGAGAGAGA	T	2042.15	PASS	AB=0.929;AC=17;AF=0.327;AN=52;BaseQRankSum=-4.209;DP=438;FS=58.907;HRun=0;HaplotypeScore=138.9381;InbreedingCoeff=-0.0525;MQ=35.84;MQ0=74;MQRankSum=-2.782;QD=7.88;ReadPosRankSum=0.093;VQSLOD=0.6203;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:16:14.50:0,14,260	0/0:6,0:6:7.81:0,8,129	./.	./.	0/0:17,0:13:5.09:0,5,214	0/1:18,0:13:51.94:67,0,52	0/0:21,0:16:20.10:0,20,144	0/1:14,0:11:0.94:1,0,318	1/1:18,0:10:6.44:163,6,0	0/1:21,2:19:38.83:301,0,39	0/1:20,5:19:16.29:66,0,16	0/0:17,0:14:9.89:0,10,80	0/1:13,0:11:37.06:192,0,37	0/1:18,2:18:9.80:140,0,10	1/1:14,1:12:0.06:1,0,0	0/0:8,0:6:8.98:0,9,138	0/0:14,0:11:2.52:0,3,359	0/0:7,0:7:14.94:0,15,302	0/0:7,0:3:0:0,0,0	0/1:22,2:16:1.95:217,0,2	0/0:12,0:9:2.67:0,3,19	0/1:28,0:25:55.26:55,0,239	0/0:31,0:28:11.19:0,11,435	0/0:21,0:18:18.04:0,18,429	0/1:15,0:13:10.68:130,0,11	0/1:12,2:13:40.28:384,0,40	0/1:9,1:8:17.30:84,0,17	1/1:16,2:12:5.95:383,6,0
chr10	58416328	.	TGAGAGAGAGA	T	1880.73	PASS	AB=0.937;AC=22;AF=0.423;AN=52;BaseQRankSum=-0.511;DP=441;FS=21.523;HRun=0;HaplotypeScore=139.1314;InbreedingCoeff=0.3515;MQ=35.69;MQ0=73;MQRankSum=0.287;QD=7.23;ReadPosRankSum=0.711;VQSLOD=1.3097;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:16:11.96:0,12,330	0/0:6,0:6:3.48:0,3,114	./.	./.	0/0:17,0:13:6.02:0,6,264	0/1:17,0:13:17.24:17,0,27	0/0:20,0:16:9.03:0,9,117	0/0:15,0:11:15.94:0,16,442	1/1:18,0:10:5.94:136,6,0	1/1:21,0:17:7.77:234,8,0	1/1:25,0:19:5.77:99,6,0	0/0:17,0:14:6.91:0,7,92	1/1:11,1:11:9.03:189,9,0	1/1:19,1:18:6.02:98,6,0	1/1:16,0:12:0.47:1,0,0	0/0:8,0:6:6.02:0,6,169	0/0:13,0:10:15.52:0,16,479	0/0:8,0:8:12.04:0,12,303	0/0:6,0:4:1.55:0,2,4	0/1:24,1:17:20.75:184,0,21	0/1:13,0:8:0:0,0,0	0/1:27,0:24:37.62:38,0,249	0/0:32,0:29:29.39:0,29,515	0/0:21,0:18:14.94:0,15,479	1/1:16,0:13:5.77:138,6,0	1/1:17,0:14:18.05:443,18,0	0/1:10,0:8:14.97:68,0,15	0/1:12,8:14:49.22:398,0,49
chr10	58417463	.	C	CAA	12300.98	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-5.192;DP=499;FS=0.590;HRun=9;HaplotypeScore=87.8906;InbreedingCoeff=0.9097;MQ=72.01;MQ0=3;MQRankSum=-3.233;QD=29.64;ReadPosRankSum=-0.367;VQSLOD=4.9049;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:19:32.83:0,33,376	1/1:0,6:6:18.06:260,18,0	0/0:10,0:9:11.37:0,11,154	0/0:20,0:20:23.80:0,24,196	0/0:35,0:35:68.71:0,69,725	1/1:4,11:16:33.10:488,33,0	1/1:4,7:11:9.03:138,9,0	1/1:6,21:30:71.15:964,71,0	1/1:2,6:8:21.07:323,21,0	1/1:6,11:17:47.30:634,47,0	1/1:7,5:13:22.83:267,23,0	1/1:0,19:19:42.14:646,42,0	1/1:7,11:17:39.12:560,39,0	1/1:10,10:22:37.86:498,38,0	1/1:6,8:14:36.08:490,36,0	1/1:3,0:15:1.58:109,2,0	1/1:2,21:22:48.16:739,48,0	1/1:1,11:12:30.10:462,30,0	1/1:10,6:16:41.60:538,42,0	1/1:13,14:28:69.53:865,70,0	1/1:4,3:9:20.54:246,21,0	1/1:1,11:12:30.06:435,30,0	1/1:3,18:22:42.14:645,42,0	1/1:5,12:17:27.09:400,27,0	1/1:5,13:18:54.11:730,54,0	1/1:6,13:20:45.11:650,45,0	1/1:21,15:36:78:1004,78,0	1/1:5,4:9:18.01:211,18,0
chr10	58417484	.	T	TA	6868.34	PASS	AB=1.000;AC=31;AF=0.554;AN=56;BaseQRankSum=-0.229;DP=450;FS=1.410;HRun=8;HaplotypeScore=87.2569;InbreedingCoeff=0.8927;MQ=63.16;MQ0=3;MQRankSum=-5.856;QD=24.98;ReadPosRankSum=-0.361;VQSLOD=5.1221;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,21:22:51.62:589,52,0	0/0:9,0:8:24.01:0,24,219	0/0:9,0:8:17.96:0,18,156	0/1:11,0:11:18.22:18,0,43	1/1:3,28:31:78.19:880,78,0	0/0:12,0:12:27.01:0,27,247	0/0:7,0:7:9:0,9,82	0/0:31,0:30:72:0,72,651	1/1:1,4:5:15.04:172,15,0	1/1:4,13:17:42.11:475,42,0	1/1:3,11:14:33.01:344,33,0	0/0:19,0:19:33.01:0,33,302	1/1:6,15:20:42.58:471,43,0	1/1:3,11:14:36.11:414,36,0	1/1:5,8:13:27.04:297,27,0	0/0:13,0:13:30.01:0,30,274	0/0:22,0:21:54.03:0,54,493	0/0:11,0:11:24.01:0,24,220	1/1:6,10:16:33.08:371,33,0	1/1:6,22:28:63.14:709,63,0	1/1:2,2:4:9.02:95,9,0	0/0:13,0:12:27.01:0,27,247	0/0:19,0:19:39.01:0,39,356	0/0:10,0:10:18:0,18,165	1/1:2,20:22:57.17:657,57,0	1/1:7,16:23:48.13:542,48,0	1/1:6,23:29:69.12:764,69,0	1/1:3,2:5:6.02:69,6,0
chr10	58417565	.	CT	C	1488.84	PASS	AB=0.886;AC=17;AF=0.304;AN=56;BaseQRankSum=-1.743;DP=467;FS=7.713;HRun=11;HaplotypeScore=67.7962;InbreedingCoeff=0.6715;MQ=50.39;MQ0=7;MQRankSum=0.018;QD=10.63;ReadPosRankSum=1.959;VQSLOD=2.6954;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:41.86:0,42,405	0/0:7,0:6:15:0,15,148	0/0:14,0:9:12.47:0,12,95	0/0:5,0:3:3.01:0,3,30	0/0:29,0:29:69.09:0,69,711	1/1:0,11:12:35:277,35,0	1/1:3,5:9:17.01:129,17,0	0/0:24,3:26:7.82:0,8,474	0/1:6,1:7:6.59:7,0,142	0/0:18,2:18:4.84:0,5,462	0/0:16,0:18:26.03:0,26,285	1/1:3,15:18:41.93:344,42,0	0/0:19,0:17:39.02:0,39,389	0/0:15,0:15:29.15:0,29,320	0/0:14,1:15:8.41:0,8,283	0/0:12,1:13:8.41:0,8,284	0/1:15,2:16:10.32:10,0,285	1/1:2,13:13:29.95:246,30,0	0/1:21,2:21:1.96:2,0,427	0/0:32,1:32:50.49:0,50,720	0/0:3,0:2:2.87:0,3,31	1/1:3,9:11:10.23:202,10,0	1/1:2,14:16:9.97:288,10,0	1/1:1,9:9:20.98:172,21,0	0/0:18,0:17:39.10:0,39,416	0/0:22,0:23:38.26:0,38,442	0/0:28,2:31:25.88:0,26,669	0/0:16,0:15:39.10:0,39,416
chr10	58417798	.	C	CT	431.98	PASS	AC=6;AF=0.176;AN=34;BaseQRankSum=-2.151;DP=300;FS=0.000;HRun=6;HaplotypeScore=26.3204;InbreedingCoeff=0.6133;MQ=16.22;MQ0=201;MQRankSum=0.161;QD=13.09;ReadPosRankSum=-0.094;VQSLOD=0.8304;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:2:3.01:0,3,31	0/0:5,0:5:9.02:0,9,92	./.	./.	0/0:21,0:19:42.09:0,42,428	./.	./.	./.	./.	0/0:7,0:6:18.04:0,18,183	0/0:3,0:2:6.01:0,6,61	1/1:8,1:1:3.01:38,3,0	0/0:22,0:3:6.01:0,6,61	0/0:9,0:4:9.02:0,9,92	0/0:4,0:2:3.01:0,3,31	0/0:4,0:1:3.01:0,3,31	./.	./.	./.	0/0:12,0:11:30.07:0,30,306	./.	1/1:2,6:8:18.02:208,18,0	1/1:5,11:10:24.08:302,24,0	./.	0/0:4,0:3:9.02:0,9,92	0/0:17,0:6:15.03:0,15,153	0/0:15,0:5:9.02:0,9,92	0/0:16,0:5:15.03:0,15,153
chr10	58419955	.	ATCAGT	A	355.34	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.768;DP=424;FS=10.743;HRun=0;HaplotypeScore=81.9140;InbreedingCoeff=0.9777;MQ=71.97;MQ0=0;MQRankSum=-1.701;QD=39.48;ReadPosRankSum=0.960;VQSLOD=3.0441;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:84.29:0,84,2584	0/0:6,0:6:18.06:0,18,563	0/0:13,0:13:38.71:0,39,963	0/0:19,1:15:21.50:0,21,693	0/0:13,0:13:33.11:0,33,1032	0/0:19,0:19:57.19:0,57,1625	0/0:10,0:10:27.05:0,27,761	0/0:22,0:22:66.23:0,66,2026	0/0:12,0:12:36.12:0,36,1125	0/0:20,0:20:60.20:0,60,1791	0/0:13,0:13:33.11:0,33,1009	0/0:11,0:11:33.11:0,33,1031	0/0:12,0:12:36.12:0,36,1049	0/0:24,0:24:69.24:0,69,2059	0/0:8,0:8:24.08:0,24,695	1/1:0,9:9:21.07:448,21,0	0/0:24,0:24:66.23:0,66,2054	0/0:13,0:13:36.12:0,36,1127	0/0:21,0:21:63.22:0,63,1848	0/0:13,0:13:39.13:0,39,1221	0/0:12,0:12:33.11:0,33,1033	0/0:13,0:13:39.13:0,39,1183	0/0:12,0:12:36.12:0,36,1073	0/0:15,0:15:39.13:0,39,1220	0/0:17,0:17:45.15:0,45,1354	0/0:19,0:19:57.20:0,57,1766	0/0:15,0:15:39.13:0,39,1203	0/0:8,0:8:24.08:0,24,738
chr10	58421167	.	A	AT	357.87	PASS	AB=0.909;AC=3;AF=0.054;AN=56;BaseQRankSum=-3.776;DP=602;FS=10.242;HRun=9;HaplotypeScore=54.8111;InbreedingCoeff=0.6451;MQ=70.77;MQ0=0;MQRankSum=-0.621;QD=13.25;ReadPosRankSum=-0.882;VQSLOD=2.0674;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:80.93:0,81,697	0/0:16,0:16:44.97:0,45,385	0/0:12,0:12:20.98:0,21,181	0/1:9,0:10:17.61:18,0,66	0/0:28,0:28:59.94:0,60,516	0/0:26,0:26:74.98:0,75,651	0/0:24,0:24:62.96:0,63,542	0/0:37,0:37:74.95:0,75,651	0/0:24,0:24:56.96:0,57,495	0/0:26,0:26:68.97:0,69,599	0/0:24,0:24:59.98:0,60,521	0/0:19,0:19:26.31:0,26,364	0/0:23,0:23:49.92:0,50,508	0/0:21,0:21:62.97:0,63,543	0/0:33,0:33:86.96:0,87,752	1/1:1,15:17:41.95:446,42,0	0/0:19,0:19:50.96:0,51,437	0/0:10,0:10:23.99:0,24,208	0/0:29,0:29:68.95:0,69,594	0/0:34,0:34:86.97:0,87,752	0/0:10,0:10:20.08:0,20,181	0/0:22,0:22:46.09:0,46,500	0/0:20,0:20:56.98:0,57,494	0/0:14,0:14:41.99:0,42,364	0/0:17,0:17:38.99:0,39,338	0/0:26,1:27:41.79:0,42,590	0/0:20,0:20:50.97:0,51,438	0/0:8,0:8:23.99:0,24,207
chr10	58421536	.	A	AAACAACAAC	4120.42	PASS	AB=1.000;AC=24;AF=0.429;AN=56;BaseQRankSum=2.863;DP=631;FS=39.338;HRun=0;HaplotypeScore=182.8155;InbreedingCoeff=0.4960;MQ=61.35;MQ0=1;MQRankSum=-5.405;QD=13.12;ReadPosRankSum=-4.664;VQSLOD=-0.2913;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:8,10:19:21.07:823,21,0	0/0:14,0:14:34:0,34,734	0/0:22,0:18:26.89:0,27,620	0/0:15,0:12:18.79:0,19,263	1/1:9,20:30:35.95:1045,36,0	0/0:23,0:22:63.19:0,63,1352	0/0:17,0:17:35.87:0,36,690	0/0:34,0:34:41.07:0,41,858	1/1:16,0:16:6.01:64,6,0	0/1:22,0:22:12.90:228,0,13	1/1:29,0:29:18.45:306,18,0	0/0:22,0:22:54.19:0,54,1219	1/1:16,0:17:15.05:223,15,0	1/1:21,0:21:3.01:39,3,0	0/1:16,0:16:26.49:104,0,26	0/0:26,0:26:69.23:0,69,1566	0/0:25,0:25:63.16:0,63,1221	0/0:25,0:25:58.72:0,59,1171	0/1:27,0:27:57.05:187,0,57	1/1:33,0:34:18.60:493,19,0	1/1:11,0:10:6.01:63,6,0	0/0:32,0:32:10.73:0,11,1023	0/0:21,0:21:23.20:0,23,914	0/0:40,0:40:77.22:0,77,2100	1/1:17,0:17:19.28:218,19,0	0/1:19,0:19:67.25:160,0,67	0/1:23,0:23:70.34:126,0,70	0/1:13,0:13:41.92:42,0,124
chr10	58421551	.	C	CAACAAA	7982.12	PASS	AB=0.979;AC=33;AF=0.589;AN=56;BaseQRankSum=-5.580;DP=708;FS=7.694;HRun=0;HaplotypeScore=170.6741;InbreedingCoeff=0.5157;MQ=66.12;MQ0=2;MQRankSum=-1.142;QD=16.03;ReadPosRankSum=-8.291;VQSLOD=0.2330;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:25:66.18:327,0,66	0/0:13,0:13:11.87:0,12,314	0/1:26,0:20:13.53:14,0,397	0/1:14,0:14:0.57:1,0,149	0/1:30,0:35:99:476,0,132	0/0:26,0:25:51.20:0,51,693	0/1:18,0:18:1.91:2,0,351	0/0:41,0:41:15.40:0,15,646	1/1:1,10:24:7.27:173,7,0	1/1:11,0:29:37.17:721,37,0	1/1:7,13:31:68.54:861,69,0	0/0:22,0:22:61.10:0,61,628	1/1:2,9:29:15.99:475,16,0	1/1:3,13:20:8.94:140,9,0	1/1:4,1:17:20.16:427,20,0	0/0:26,0:26:78.13:0,78,836	0/0:24,0:24:43.72:0,44,605	0/1:25,0:25:13.81:14,0,548	1/1:10,0:24:56.70:580,57,0	1/1:5,22:46:86.32:1396,86,0	1/1:1,1:11:11.97:265,12,0	0/1:26,0:25:47.86:48,0,501	0/0:24,0:24:8.30:0,8,465	0/0:34,0:34:51.61:0,52,933	1/1:3,9:23:24.06:578,24,0	1/1:1,12:26:74.91:899,75,0	1/1:13,0:27:30.61:369,31,0	1/1:17,0:17:29.73:218,30,0
chr10	58421693	.	CA	C	12735.36	PASS	AB=1.000;AC=34;AF=0.607;AN=56;BaseQRankSum=-15.348;DP=629;FS=0.320;HRun=1;HaplotypeScore=89.8579;InbreedingCoeff=0.6953;MQ=72.10;MQ0=0;MQRankSum=-1.936;QD=29.14;ReadPosRankSum=1.674;VQSLOD=4.6426;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,43:44:99:1542,114,0	0/1:9,0:9:29.29:29,0,51	0/0:19,0:18:39.31:0,39,458	0/0:27,0:25:54.17:0,54,716	1/1:0,34:34:93.06:1179,93,0	0/1:22,0:22:2.26:2,0,124	0/0:26,0:26:32.31:0,32,185	0/1:23,0:23:32.02:32,0,85	1/1:0,15:15:39.13:544,39,0	1/1:0,29:29:87.23:1153,87,0	1/1:0,19:19:42.14:583,42,0	0/0:19,0:19:21.84:0,22,136	1/1:0,19:19:48.16:668,48,0	1/1:0,19:19:39.13:543,39,0	1/1:0,19:19:51.17:712,51,0	0/1:18,0:18:32.38:32,0,44	0/0:23,0:23:3.26:0,3,138	0/0:14,0:14:12.58:0,13,96	1/1:0,24:24:65.38:764,65,0	1/1:0,24:24:66.03:828,66,0	1/1:0,35:35:84.28:1173,84,0	0/0:12,0:12:30.88:0,31,124	0/0:23,0:23:30.62:0,31,179	0/0:29,0:29:21.72:0,22,185	1/1:1,24:25:43.23:856,43,0	1/1:0,26:26:75.19:1006,75,0	1/1:0,26:26:66.22:920,66,0	1/1:0,7:7:12.04:168,12,0
chr10	58422037	.	G	GAA	2323.80	PASS	AB=0.830;AC=22;AF=0.393;AN=56;BaseQRankSum=0.545;DP=579;FS=12.168;HRun=13;HaplotypeScore=89.3230;InbreedingCoeff=0.6376;MQ=71.64;MQ0=0;MQRankSum=-1.913;QD=8.67;ReadPosRankSum=-2.140;VQSLOD=0.0808;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:30:25.31:0,25,354	1/1:1,0:9:14.97:52,15,0	0/0:16,0:17:14.70:0,15,174	0/1:8,0:8:14.48:14,0,44	0/0:26,0:32:37.88:0,38,358	1/1:2,16:19:21.07:285,21,0	1/1:5,9:15:27.03:331,27,0	1/1:12,0:30:37.39:192,37,0	0/0:22,0:22:44.71:0,45,396	0/0:22,0:23:32.66:0,33,332	0/0:17,0:19:26.11:0,26,222	0/1:3,14:22:2.88:217,0,3	0/1:19,0:19:13.60:14,0,156	0/0:16,0:17:26.49:0,26,223	0/0:17,0:17:23.74:0,24,211	0/1:13,0:17:0.71:1,0,173	0/1:5,0:28:11.44:94,0,11	1/1:4,8:17:26.03:260,26,0	0/0:23,0:26:29.04:0,29,278	0/0:27,0:29:62.29:0,62,522	0/0:16,0:19:22.39:0,22,279	1/1:4,9:14:24.74:256,25,0	1/1:8,14:24:35.68:363,36,0	1/1:7,15:25:36.07:446,36,0	0/0:17,0:19:12.09:0,12,257	0/0:24,0:27:38.06:0,38,355	0/1:21,0:21:1.45:1,0,269	0/0:14,0:14:23.87:0,24,207
chr10	58425082	.	CTT	C	10008.87	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-5.493;DP=491;FS=2.525;HRun=12;HaplotypeScore=63.5918;InbreedingCoeff=0.7971;MQ=69.68;MQ0=1;MQRankSum=-0.693;QD=21.90;ReadPosRankSum=2.784;VQSLOD=4.5298;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,17:20:48.09:492,48,0	1/1:0,6:6:18.04:183,18,0	0/0:23,1:11:18.54:0,19,203	0/0:10,0:8:5.23:0,5,69	1/1:4,18:22:54.09:546,54,0	1/1:2,18:20:30.05:305,30,0	1/1:2,8:10:21.04:214,21,0	1/1:10,19:29:60.02:593,60,0	1/1:0,18:18:48.11:488,48,0	1/1:2,12:14:35.78:348,36,0	1/1:5,13:18:39.03:396,39,0	1/1:7,14:21:47.92:470,48,0	1/1:1,16:17:42.07:427,42,0	1/1:0,11:11:24.05:244,24,0	1/1:4,18:22:39.08:396,39,0	1/1:3,22:25:54.09:549,54,0	1/1:3,26:29:60.11:610,60,0	1/1:3,9:11:13.40:203,13,0	1/1:6,6:14:23.48:207,23,0	1/1:2,19:21:53.85:531,54,0	1/1:1,3:4:0.36:26,0,0	1/1:1,7:8:21.04:208,21,0	1/1:3,11:14:29.74:304,30,0	1/1:1,12:14:32.80:317,33,0	1/1:3,21:24:47.82:488,48,0	1/1:2,20:23:62.87:620,63,0	1/1:1,15:16:39.08:394,39,0	1/1:6,19:25:39.06:449,39,0
chr10	58425093	.	TTC	T	1941.55	PASS	AB=0.983;AC=38;AF=0.679;AN=56;BaseQRankSum=5.863;DP=479;FS=7.007;HRun=0;HaplotypeScore=90.2450;InbreedingCoeff=-0.3697;MQ=65.58;MQ0=2;MQRankSum=0.837;QD=4.26;ReadPosRankSum=11.098;VQSLOD=-0.4400;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:19:21.96:114,22,0	1/1:6,0:6:12.41:34,12,0	0/0:23,0:10:0.07:0,0,109	0/1:8,1:7:18.78:19,0,82	0/1:21,0:21:21.35:113,0,21	0/1:22,0:22:59.03:59,0,62	0/1:11,0:11:22.33:22,0,50	0/1:22,1:23:8.49:120,0,8	0/1:20,0:20:7.31:71,0,7	0/1:14,0:14:25.98:68,0,26	1/1:14,1:15:8.83:110,9,0	0/1:18,3:21:25.10:143,0,25	0/1:20,0:20:50.56:91,0,51	1/1:11,0:11:19.06:82,19,0	0/1:21,0:21:35.09:72,0,35	1/1:23,0:23:15.78:79,16,0	1/1:27,0:27:25.28:126,25,0	1/1:11,0:10:19.67:75,20,0	0/1:11,0:11:34.88:40,0,35	0/1:23,0:23:41.39:108,0,41	0/1:5,0:5:16.47:17,0,16	1/1:8,0:8:5.79:45,6,0	1/1:11,0:11:21.91:83,22,0	0/1:15,0:15:17.13:41,0,17	1/1:22,1:23:18.85:106,19,0	1/1:22,1:23:15.09:128,15,0	0/1:19,0:18:11.50:74,0,12	0/1:24,0:24:49.70:60,0,50
chr10	58425214	.	GA	G	1723.24	PASS	AB=0.709;AC=20;AF=0.357;AN=56;BaseQRankSum=-0.576;DP=555;FS=4.042;HRun=14;HaplotypeScore=89.3004;InbreedingCoeff=0.3201;MQ=70.17;MQ0=9;MQRankSum=0.297;QD=6.31;ReadPosRankSum=5.982;VQSLOD=2.7817;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:27:8.59:0,9,36	0/0:3,0:4:5.82:0,6,37	0/0:29,0:15:12.73:0,13,120	0/0:27,0:15:10.86:0,11,71	0/0:21,0:23:41.69:0,42,270	0/0:15,1:17:13.18:0,13,246	0/1:14,2:16:4.33:4,0,222	0/0:27,0:32:44.08:0,44,246	0/1:11,6:17:18.97:111,0,19	1/1:9,10:18:23.64:164,24,0	0/1:9,9:20:46.32:103,0,46	0/0:15,0:15:30.43:0,30,257	1/1:8,7:15:25.54:162,26,0	0/1:7,9:17:4.47:89,0,4	1/1:8,9:17:23.67:164,24,0	0/0:21,0:22:26.82:0,27,185	0/0:18,0:25:40.33:0,40,190	0/1:7,4:10:40.75:41,0,81	0/1:10,9:19:1.22:106,0,1	0/1:19,9:27:2.35:118,0,2	0/1:6,6:13:5.74:92,0,6	0/0:15,2:17:15.43:0,15,274	0/0:18,0:18:30.88:0,31,264	0/0:19,0:21:44.30:0,44,375	1/1:3,7:10:16.90:123,17,0	0/1:14,8:22:25.94:134,0,26	0/1:11,11:22:68.07:146,0,68	1/1:4,18:24:31.34:350,31,0
chr10	58426097	.	AAC	A	17286.99	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=4.566;DP=828;FS=1.149;HRun=0;HaplotypeScore=108.2880;InbreedingCoeff=0.9999;MQ=86.03;MQ0=4;MQRankSum=-3.639;QD=36.17;ReadPosRankSum=3.816;VQSLOD=7.1151;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,46:48:99:1892,132,0	0/0:11,0:11:33.11:0,33,593	0/0:32,1:32:80.50:0,80,1476	0/0:22,0:22:60.14:0,60,940	1/1:0,27:26:63.13:857,63,0	0/0:35,0:35:99:0,105,1866	0/0:20,0:20:54.17:0,54,945	0/0:39,0:39:99:0,108,1960	1/1:0,35:35:96.32:1376,96,0	1/1:1,32:33:96.29:1330,96,0	1/1:0,12:12:33.11:473,33,0	0/0:31,0:31:90.31:0,90,1633	1/1:1,38:39:99:1419,99,0	1/1:2,36:38:93.31:1330,93,0	1/1:2,28:30:66.22:943,66,0	0/0:45,0:45:99:0,129,2312	0/0:26,0:26:75.26:0,75,1358	0/0:10,0:10:30.10:0,30,541	1/1:1,21:20:57.16:776,57,0	1/1:0,22:22:51.14:706,51,0	1/1:2,50:52:99:1803,126,0	0/0:22,0:22:60.21:0,60,1083	0/0:19,0:19:57.20:0,57,1037	0/0:37,0:37:99:0,111,2017	1/1:2,27:29:63.21:903,63,0	1/1:1,28:29:84.28:1202,84,0	1/1:0,39:39:99:1505,105,0	1/1:0,22:22:54.18:774,54,0
chr10	58427518	.	G	GC	19128.33	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-7.621;DP=543;FS=9.098;HRun=1;HaplotypeScore=54.0248;InbreedingCoeff=0.9898;MQ=94.96;MQ0=0;MQRankSum=-11.101;QD=38.96;ReadPosRankSum=6.480;VQSLOD=4.4316;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,27:28:71.71:1047,72,0	1/1:0,6:6:18.06:270,18,0	0/0:31,0:31:90.22:0,90,1115	0/0:21,0:21:40.88:0,41,578	1/1:0,9:9:27.09:404,27,0	1/1:1,19:20:48.16:719,48,0	1/1:2,17:19:36.05:539,36,0	1/1:6,27:35:93.27:1296,93,0	1/1:0,17:17:51.17:764,51,0	1/1:2,20:22:63.17:891,63,0	1/1:0,12:12:36.12:533,36,0	1/1:0,20:20:57.19:854,57,0	1/1:2,21:23:57.19:854,57,0	1/1:3,24:27:69.23:1033,69,0	1/1:0,21:21:57.19:853,57,0	1/1:0,16:16:48.16:719,48,0	1/1:1,18:19:48.16:718,48,0	1/1:0,9:9:24.08:359,24,0	1/1:1,17:18:51.17:758,51,0	1/1:0,11:11:33.11:480,33,0	1/1:1,30:31:63.21:944,63,0	1/1:1,8:9:18.06:270,18,0	1/1:0,15:15:42.14:629,42,0	1/1:1,20:21:54.18:809,54,0	1/1:1,23:24:57.19:854,57,0	1/1:0,19:19:57.19:850,57,0	1/1:1,27:28:78.22:1143,78,0	1/1:0,12:12:36.12:539,36,0
chr10	58429532	.	TG	T	16223.65	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=8.610;DP=738;FS=6.898;HRun=1;HaplotypeScore=208.5893;InbreedingCoeff=0.9992;MQ=87.36;MQ0=0;MQRankSum=-11.978;QD=23.86;ReadPosRankSum=5.308;VQSLOD=4.3633;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,59:64:99:1521,178,0	1/1:1,9:10:29.97:258,30,0	0/0:27,0:27:77.62:0,78,1178	0/0:31,0:31:87.21:0,87,1244	1/1:4,25:29:80:672,80,0	1/1:2,22:24:70.71:582,71,0	1/1:5,23:28:78.80:689,79,0	1/1:5,24:29:86.12:679,86,0	1/1:1,19:20:59.86:505,60,0	1/1:2,16:19:56.65:480,57,0	1/1:0,22:25:62.79:519,63,0	1/1:6,28:34:95.99:794,96,0	1/1:4,26:30:88.86:720,89,0	1/1:7,27:34:94.77:798,95,0	1/1:2,25:27:80.31:670,80,0	1/1:1,25:26:74.88:647,75,0	1/1:6,23:29:71.63:602,72,0	1/1:1,21:22:65.42:550,65,0	1/1:0,8:11:28.46:239,28,0	1/1:0,17:23:56.38:444,56,0	1/1:5,21:26:75.91:673,76,0	1/1:4,23:27:80.93:706,81,0	1/1:0,20:22:59.91:517,60,0	1/1:3,32:35:92.56:789,93,0	1/1:1,23:24:71.42:617,71,0	1/1:0,27:27:80.61:684,81,0	1/1:1,23:24:69.70:573,70,0	1/1:1,10:11:33.01:295,33,0
chr10	58429534	.	TC	T	15965.14	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=8.148;DP=739;FS=11.654;HRun=1;HaplotypeScore=207.3551;InbreedingCoeff=0.9990;MQ=87.77;MQ0=0;MQRankSum=-12.081;QD=23.48;ReadPosRankSum=5.995;VQSLOD=2.9770;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,59:62:99:1462,168,0	1/1:0,9:9:26.97:233,27,0	0/0:27,0:27:81.19:0,81,1224	0/0:32,0:32:87.29:0,87,1365	1/1:4,25:29:77:654,77,0	1/1:3,22:25:74.13:639,74,0	1/1:6,23:29:83.91:736,84,0	1/1:4,24:28:83.15:653,83,0	1/1:1,19:20:59.86:504,60,0	1/1:4,16:20:56.65:481,57,0	1/1:3,22:25:59.35:498,59,0	1/1:5,28:33:89.52:745,90,0	1/1:5,26:31:89.67:724,90,0	1/1:4,27:31:90.89:771,91,0	1/1:1,25:26:77.31:644,77,0	1/1:2,25:27:78.76:675,79,0	1/1:6,23:29:67.77:580,68,0	1/1:3,21:24:65.89:550,66,0	1/1:3,8:11:29.90:260,30,0	1/1:6,17:23:58.80:462,59,0	1/1:4,21:25:72.04:649,72,0	1/1:5,23:28:81.81:708,82,0	1/1:2,20:22:56.46:495,56,0	1/1:2,32:34:86.63:748,87,0	1/1:2,23:25:67.03:581,67,0	1/1:1,27:28:83.54:707,84,0	1/1:2,23:25:59.91:511,60,0	1/1:1,10:11:33.01:295,33,0
chr10	58430126	.	A	ATGTC	17256.22	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-10.276;DP=714;FS=16.711;HRun=0;HaplotypeScore=126.0680;InbreedingCoeff=0.9988;MQ=90.72;MQ0=0;MQRankSum=-9.371;QD=65.12;ReadPosRankSum=-0.196;VQSLOD=5.4510;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:87.30:0,87,1599	1/1:0,8:8:21.07:558,21,0	0/0:37,0:37:99:0,99,1797	0/0:23,0:23:53.06:0,53,946	0/0:28,0:28:66.23:0,66,1232	1/1:3,17:20:45.15:1197,45,0	1/1:3,21:25:66.23:1743,66,0	1/1:11,18:31:93.31:2319,93,0	0/0:25,0:25:69.22:0,69,1243	0/0:30,0:30:84.29:0,84,1561	0/0:11,0:11:33.11:0,33,599	1/1:6,25:32:72.25:1915,72,0	0/0:22,0:22:63.22:0,63,1163	0/0:24,0:24:66.23:0,66,1205	0/0:26,0:26:75.23:0,75,1337	1/1:5,19:27:57.19:1473,57,0	1/1:2,23:26:63.22:1675,63,0	1/1:4,18:23:63.22:1677,63,0	0/0:29,0:29:87.29:0,87,1579	0/0:32,0:32:90.31:0,90,1650	0/0:31,0:31:87.27:0,87,1582	1/1:5,26:32:78.27:2066,78,0	1/1:3,19:22:57.20:1518,57,0	1/1:3,16:19:41.93:1115,42,0	0/0:26,0:26:72.24:0,72,1307	0/0:32,0:32:93.29:0,93,1645	0/0:32,0:32:84.27:0,84,1512	0/0:7,0:7:21.07:0,21,392
chr10	58431401	.	T	TTG	1510.57	PASS	AB=0.980;AC=28;AF=0.538;AN=52;BaseQRankSum=6.062;DP=685;FS=11.100;HRun=0;HaplotypeScore=156.3773;InbreedingCoeff=-0.5742;MQ=64.98;MQ0=9;MQRankSum=-2.938;QD=2.54;ReadPosRankSum=-5.517;VQSLOD=-0.2810;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:37,0:37:45.73:46,0,77	1/1:5,2:7:9.03:133,9,0	./.	./.	0/1:22,0:22:9.91:10,0,59	0/1:14,0:14:8.81:9,0,16	0/1:28,0:27:23.15:23,0,47	1/1:36,0:35:16.30:148,16,0	0/1:21,0:21:95.25:95,0,103	0/1:24,0:24:61.35:61,0,175	0/0:9,0:9:12.02:0,12,126	0/1:23,0:22:23.11:23,0,35	0/1:27,0:27:99:102,0,139	0/1:25,0:25:99:133,0,124	0/1:28,0:28:43.17:43,0,280	0/1:22,0:22:24.76:43,0,25	0/1:21,2:22:23.65:123,0,24	0/1:15,9:23:10.41:121,0,10	0/1:23,0:23:37.45:37,0,141	0/1:20,0:20:9.24:9,0,149	0/1:47,0:45:99:158,0,194	0/1:31,0:31:10.64:19,0,11	1/1:14,1:15:3.70:56,4,0	0/0:29,0:29:2.68:0,3,11	0/1:25,0:26:62.37:62,0,141	0/1:34,0:34:98.45:121,0,98	0/1:21,0:20:21.77:22,0,134	1/1:12,0:12:11.31:64,11,0
chr10	58431425	.	G	GTGTGTGTGTGTGTA	4754.92	PASS	AB=0.927;AC=26;AF=0.464;AN=56;BaseQRankSum=-3.662;DP=691;FS=4.725;HRun=0;HaplotypeScore=265.9513;InbreedingCoeff=0.5907;MQ=45.55;MQ0=16;MQRankSum=-2.441;QD=11.29;ReadPosRankSum=-6.673;VQSLOD=1.8030;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:32,0:32:68.31:68,0,225	1/1:13,0:13:10.55:493,11,0	0/0:13,0:4:5.95:0,6,60	0/0:13,0:5:5.99:0,6,51	0/1:22,0:22:8.59:9,0,198	1/1:15,0:15:12:122,12,0	1/1:18,0:34:26.75:340,27,0	1/1:30,0:29:64.38:773,64,0	0/0:17,0:17:22.52:0,23,398	0/0:29,0:28:36.11:0,36,744	0/0:12,0:12:12.02:0,12,319	1/1:26,0:25:35.41:363,35,0	0/0:30,0:30:50.77:0,51,811	0/0:30,0:30:29.46:0,29,678	0/0:27,0:27:47.71:0,48,1064	1/1:6,20:34:11.89:354,12,0	1/1:30,0:29:50.87:909,51,0	1/1:27,0:25:38.76:605,39,0	0/1:22,0:21:16.39:16,0,515	0/0:17,0:17:21.53:0,22,563	0/0:54,0:50:50.49:0,50,1233	1/1:30,0:30:29.56:269,30,0	1/1:12,0:12:10.95:405,11,0	0/1:8,9:37:0:0,0,0	0/1:27,0:26:3.45:3,0,641	0/1:29,0:29:24.86:25,0,508	0/0:23,0:22:28.52:0,29,413	0/0:5,0:4:12:0,12,172
chr10	58431429	.	G	GTGTC	4740.91	PASS	AB=0.917;AC=31;AF=0.554;AN=56;BaseQRankSum=1.275;DP=682;FS=0.000;HRun=0;HaplotypeScore=184.2229;InbreedingCoeff=0.3354;MQ=45.35;MQ0=16;MQRankSum=-3.419;QD=9.96;ReadPosRankSum=5.242;VQSLOD=3.7629;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:29:17.55:156,18,0	0/1:13,0:13:6.32:6,0,133	0/0:11,0:3:5.95:0,6,42	0/0:11,0:4:12.01:0,12,122	1/1:21,0:22:0.47:2,0,0	0/1:14,0:14:7.28:7,0,63	0/0:40,0:39:11.22:0,11,96	0/0:27,0:27:35.76:0,36,288	1/1:12,3:16:23.95:422,24,0	1/1:28,0:27:47.60:381,48,0	0/1:14,0:14:0.27:0,0,0	0/0:27,0:26:12.56:0,13,214	1/1:24,3:28:48.48:558,48,0	1/1:22,6:30:31.28:498,31,0	0/1:23,5:28:21.65:459,0,22	1/1:29,0:29:8.33:44,8,0	0/1:30,0:29:23.51:24,0,215	0/0:28,0:26:26.85:0,27,204	1/1:22,1:21:29.90:345,30,0	0/1:14,2:16:39.29:136,0,39	0/1:29,4:53:18.11:487,0,18	0/0:29,0:29:12.94:0,13,84	0/1:12,0:12:29.49:29,0,32	0/0:33,0:33:5.62:0,6,43	0/1:23,4:27:30.36:223,0,30	1/1:30,0:31:68.37:529,68,0	1/1:21,2:22:18.02:268,18,0	1/1:4,0:4:8.99:165,9,0
chr10	58431443	.	G	GCC	4242.02	PASS	AB=0.775;AC=16;AF=0.286;AN=56;BaseQRankSum=7.449;DP=724;FS=22.624;HRun=0;HaplotypeScore=188.9677;InbreedingCoeff=-0.3956;MQ=47.68;MQ0=16;MQRankSum=-5.866;QD=9.84;ReadPosRankSum=-5.557;VQSLOD=2.4401;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:27:39.70:40,0,247	0/0:13,0:13:28.93:0,29,412	0/0:15,0:10:19.81:0,20,324	0/0:22,0:11:20.31:0,20,323	0/1:15,13:27:99:368,0,116	0/0:17,0:17:27.01:0,27,438	0/0:45,0:44:59.90:0,60,846	0/0:26,0:26:75.12:0,75,1177	0/1:8,4:13:60.02:193,0,60	0/1:20,13:32:99:854,0,483	0/1:7,5:12:61.83:85,0,62	0/0:31,0:30:65.70:0,66,1005	0/1:17,10:27:99:359,0,439	0/1:17,12:29:99:210,0,266	0/1:20,12:33:99:280,0,371	0/1:27,1:28:40.53:41,0,219	0/0:31,0:30:63.60:0,64,938	0/0:23,0:21:51.03:0,51,775	0/1:19,8:25:99:433,0,507	0/1:11,7:18:75.59:119,0,76	0/1:51,5:52:6.39:6,0,575	0/0:28,0:28:33.11:0,33,532	0/0:10,0:10:14.39:0,14,167	0/0:32,0:32:24.08:0,24,391	0/1:18,15:31:99:152,0,218	0/1:26,13:40:99:789,0,781	0/1:14,7:21:99:267,0,154	0/1:5,1:5:46.65:47,0,104
chr10	58431453	.	C	CTGCCTCTGTGTGTG	12059.50	PASS	AB=0.990;AC=33;AF=0.589;AN=56;BaseQRankSum=-3.768;DP=770;FS=11.004;HRun=0;HaplotypeScore=303.0273;InbreedingCoeff=0.7630;MQ=52.96;MQ0=10;MQRankSum=-5.797;QD=23.33;ReadPosRankSum=-4.129;VQSLOD=1.8507;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:19,9:41:6.91:170,7,0	0/0:13,0:13:24.08:0,24,843	0/0:17,0:11:11.60:0,12,229	0/1:30,0:21:5.39:5,0,170	1/1:28,0:27:30.43:794,30,0	0/0:15,0:15:17.33:0,17,740	0/0:40,0:39:48.16:0,48,1488	0/0:28,0:28:36.10:0,36,906	1/1:17,0:17:24.03:534,24,0	1/1:36,0:35:66.21:2051,66,0	1/1:11,0:11:9.46:228,9,0	0/0:32,0:31:66.63:0,67,2156	1/1:28,0:28:30.06:1003,30,0	1/1:27,0:27:14.91:480,15,0	1/1:31,0:31:34.75:852,35,0	0/1:32,0:32:86.18:86,0,385	0/0:30,0:30:47.27:0,47,1531	0/1:23,0:23:11.34:11,0,1406	1/1:31,0:30:45.10:1284,45,0	1/1:21,0:21:23.61:466,24,0	1/1:51,0:49:24.94:403,25,0	0/0:27,0:27:36.58:0,37,1100	0/0:12,0:12:12.01:0,12,285	0/0:39,0:39:32.91:0,33,1030	1/1:34,0:33:27.70:494,28,0	1/1:45,0:45:75.24:2232,75,0	1/1:19,0:19:27.52:725,28,0	1/1:10,0:10:12.04:240,12,0
chr10	58432399	.	AAATC	A	9887.73	PASS	AB=0.998;AC=30;AF=0.536;AN=56;BaseQRankSum=10.574;DP=836;FS=4.452;HRun=0;HaplotypeScore=174.0649;InbreedingCoeff=-0.1390;MQ=60.36;MQ0=3;MQRankSum=2.148;QD=13.91;ReadPosRankSum=0.398;VQSLOD=4.5104;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:39,0:39:8.95:427,0,9	0/0:12,0:12:24.08:0,24,568	0/0:26,0:19:27:0,27,345	0/0:28,0:24:35.86:0,36,517	0/1:35,0:34:83.97:348,0,84	1/1:8,27:36:51.17:806,51,0	1/1:11,13:24:21.07:340,21,0	0/0:29,0:29:54.09:0,54,769	0/1:25,0:25:41.97:155,0,42	0/1:30,0:30:99:221,0,126	0/1:24,0:24:17.47:393,0,17	1/1:11,25:36:54.18:875,54,0	0/1:37,0:37:99:216,0,167	0/1:36,1:37:99:318,0,132	0/1:36,0:36:66.94:502,0,67	0/1:35,0:34:53.96:273,0,54	0/0:30,0:30:69.12:0,69,1377	1/1:4,18:22:36.12:584,36,0	0/1:19,0:18:22.03:198,0,22	0/1:29,0:29:58.96:308,0,59	0/1:33,0:33:16.95:380,0,17	1/1:16,17:33:39.09:603,39,0	1/1:2,23:25:43.77:698,44,0	1/1:5,32:37:63.22:1021,63,0	0/1:29,0:29:32.96:291,0,33	0/1:32,0:32:37.86:418,0,38	0/1:44,0:42:99:392,0,151	0/1:14,0:14:21.97:119,0,22
chr10	58432426	.	TCAAA	T	14307.17	PASS	AB=1.000;AC=42;AF=0.750;AN=56;BaseQRankSum=4.305;DP=798;FS=4.250;HRun=0;HaplotypeScore=141.1515;InbreedingCoeff=0.0316;MQ=60.71;MQ0=6;MQRankSum=4.735;QD=19.47;ReadPosRankSum=8.647;VQSLOD=3.9203;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:6,39:45:54.18:924,54,0	0/1:10,0:10:11.88:12,0,360	0/0:31,0:19:35.95:0,36,383	0/0:31,0:26:50.98:0,51,695	1/1:5,28:32:62.69:832,63,0	0/1:32,0:32:37.70:301,0,38	0/1:23,0:23:99:105,0,192	0/1:33,0:32:99:296,0,213	1/1:3,14:17:21.07:360,21,0	1/1:7,24:30:65.66:809,66,0	1/1:3,22:25:62.72:870,63,0	0/1:29,0:29:33.18:361,0,33	1/1:8,24:32:30.57:514,31,0	1/1:8,19:27:39.10:637,39,0	1/1:6,28:34:66.23:1131,66,0	1/1:4,26:30:36.12:617,36,0	0/1:30,0:30:87.74:88,0,740	0/1:25,0:24:84.37:222,0,84	1/1:2,19:21:57:707,57,0	1/1:4,20:24:50.58:717,51,0	1/1:3,26:29:48.16:822,48,0	0/1:21,0:21:61.95:259,0,62	0/1:25,0:25:14.25:298,0,14	0/1:42,0:42:99:416,0,129	1/1:4,22:26:36.12:616,36,0	1/1:4,37:41:99:1353,102,0	1/1:9,30:37:0.21:784,0,0	1/1:3,8:11:15.05:257,15,0
chr10	58432698	.	CTATCT	C	18595.96	PASS	AB=0.929;AC=53;AF=0.946;AN=56;BaseQRankSum=6.146;DP=442;FS=36.730;HRun=0;HaplotypeScore=286.3916;InbreedingCoeff=0.6416;MQ=68.66;MQ0=0;MQRankSum=-6.672;QD=43.45;ReadPosRankSum=4.674;VQSLOD=3.5673;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,25:29:48.59:962,49,0	1/1:0,4:4:9.03:190,9,0	0/0:14,0:14:14.63:0,15,509	0/1:12,0:13:6.18:6,0,717	1/1:2,18:20:17.39:298,17,0	1/1:0,11:11:31.35:633,31,0	1/1:0,12:13:21.07:435,21,0	1/1:1,9:10:30.09:596,30,0	1/1:0,22:22:60.21:1252,60,0	1/1:2,15:17:48.16:972,48,0	1/1:1,12:13:18:294,18,0	1/1:2,20:22:61.44:1233,61,0	1/1:0,23:23:66.23:1363,66,0	1/1:3,16:19:57.17:1114,57,0	1/1:3,15:18:54.11:1010,54,0	1/1:2,21:23:66.14:1234,66,0	1/1:1,15:16:38.69:782,39,0	1/1:1,8:10:30.06:563,30,0	1/1:0,6:6:18.06:333,18,0	1/1:2,12:14:17.59:260,18,0	1/1:2,10:16:12.01:238,12,0	1/1:0,13:13:19.62:377,20,0	1/1:1,18:19:27.05:523,27,0	1/1:1,9:11:17.79:337,18,0	1/1:1,14:15:30.10:619,30,0	1/1:0,26:26:75.26:1566,75,0	1/1:1,19:20:54.19:1151,54,0	1/1:0,5:5:12.04:255,12,0
chr10	58432708	.	ATAGCATGAT	A	28590.09	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=4.246;DP=561;FS=37.377;HRun=0;HaplotypeScore=335.5485;InbreedingCoeff=0.7860;MQ=55.48;MQ0=0;MQRankSum=-5.288;QD=52.85;ReadPosRankSum=3.590;VQSLOD=3.3256;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,25:35:58.47:1534,58,0	1/1:4,4:8:21.07:441,21,0	0/0:9,0:9:10.83:0,11,421	0/0:10,0:11:0.39:0,0,426	1/1:9,18:27:14.99:400,15,0	1/1:8,11:19:57.10:1242,57,0	1/1:7,12:19:36.03:798,36,0	1/1:17,9:26:77.76:1190,78,0	1/1:5,22:27:75.23:2004,75,0	1/1:8,15:23:68.82:1549,69,0	1/1:7,12:19:14.98:381,15,0	1/1:1,20:21:57.19:1673,57,0	1/1:4,23:27:69.15:2003,69,0	1/1:4,16:20:57.11:1562,57,0	1/1:4,15:19:55.26:1409,55,0	1/1:2,21:23:66.14:1806,66,0	1/1:6,15:21:50.72:1227,51,0	1/1:3,8:11:30.08:855,30,0	1/1:6,6:12:35.91:610,36,0	1/1:16,12:28:21.16:371,21,0	1/1:12,11:23:18.37:411,18,0	1/1:7,12:19:21.54:584,22,0	1/1:4,18:22:24.08:728,24,0	1/1:6,9:15:21.54:537,22,0	1/1:4,14:18:33.11:904,33,0	1/1:6,26:32:93.11:2405,93,0	1/1:3,18:22:54.19:1597,54,0	1/1:0,5:5:12.04:367,12,0
chr10	58432716	.	AT	A	16826.48	PASS	AB=1.000;AC=53;AF=0.946;AN=56;BaseQRankSum=2.777;DP=607;FS=5.959;HRun=1;HaplotypeScore=320.0010;InbreedingCoeff=0.5477;MQ=52.22;MQ0=0;MQRankSum=-4.532;QD=28.09;ReadPosRankSum=3.733;VQSLOD=3.5744;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:25,13:38:69.58:926,70,0	1/1:4,4:8:21.07:289,21,0	0/1:8,0:8:13.97:14,0,222	0/0:8,0:8:6.02:0,6,96	1/1:18,14:32:23.37:329,23,0	1/1:11,13:24:66.22:904,66,0	1/1:12,10:22:45.15:603,45,0	1/1:9,21:30:90.29:1226,90,0	1/1:22,6:28:78.24:1040,78,0	1/1:15,10:25:75.25:1030,75,0	1/1:12,7:19:15.05:200,15,0	1/1:20,4:24:63.21:847,63,0	1/1:23,4:27:69.20:898,69,0	1/1:16,6:22:60.20:803,60,0	1/1:15,6:21:57.19:771,57,0	1/1:21,3:24:66.22:891,66,0	1/1:15,7:22:50.80:665,51,0	1/1:8,3:11:27.09:366,27,0	1/1:6,7:13:38.71:487,39,0	1/1:12,19:31:29.86:415,30,0	1/1:11,13:24:20.35:252,20,0	1/1:13,8:21:27.05:359,27,0	1/1:18,8:26:30.10:406,30,0	1/1:9,6:15:21.07:286,21,0	1/1:14,6:20:36.12:484,36,0	1/1:26,9:35:99:1371,102,0	1/1:19,4:23:57.19:762,57,0	1/1:5,1:6:15.05:203,15,0
chr10	58433090	.	T	TA	9953.96	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-10.605;DP=636;FS=0.000;HRun=0;HaplotypeScore=113.8571;InbreedingCoeff=0.9802;MQ=75.38;MQ0=3;MQRankSum=-0.543;QD=28.94;ReadPosRankSum=5.267;VQSLOD=4.6570;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,21:23:33.22:550,33,0	0/0:12,0:12:10.68:0,11,146	0/0:36,0:18:24.44:0,24,400	0/0:28,0:17:26.40:0,26,236	1/1:2,29:31:76.70:892,77,0	0/0:23,0:23:46.43:0,46,229	0/0:20,0:20:47.42:0,47,219	0/0:31,0:31:83.05:0,83,423	1/1:2,17:19:6.88:464,7,0	1/1:0,24:24:69.14:791,69,0	1/1:2,20:22:50.56:594,51,0	0/0:25,0:25:31.95:0,32,210	1/1:3,23:26:30.50:590,30,0	1/1:0,19:19:54.17:649,54,0	1/1:1,30:31:81.25:970,81,0	0/0:24,0:24:42.94:0,43,313	0/0:23,0:23:61.41:0,61,376	0/0:16,0:16:29.32:0,29,155	1/1:5,13:18:51.91:552,52,0	1/1:7,23:30:69.86:861,70,0	1/1:1,15:16:32.08:389,32,0	0/0:25,0:25:64.49:0,64,335	0/0:21,0:21:25.95:0,26,166	0/0:8,0:8:21.90:0,22,95	1/1:0,17:17:48.14:564,48,0	1/1:1,30:31:84.67:967,85,0	1/1:0,29:29:72.22:865,72,0	1/1:0,8:8:21.07:256,21,0
chr10	58433091	.	T	TA	15370.67	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-3.603;DP=644;FS=0.738;HRun=2;HaplotypeScore=94.1142;InbreedingCoeff=0.8949;MQ=75.87;MQ0=3;MQRankSum=-1.198;QD=26.55;ReadPosRankSum=5.439;VQSLOD=4.4936;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:23:50.41:624,50,0	1/1:11,0:11:8.36:66,8,0	0/0:35,0:19:20.99:0,21,329	0/0:28,0:17:27.91:0,28,174	1/1:30,0:30:82.05:944,82,0	1/1:2,21:23:45.15:591,45,0	1/1:0,21:21:51.17:671,51,0	1/1:33,0:33:35.38:265,35,0	1/1:20,0:20:43.38:527,43,0	1/1:24,0:24:69.20:830,69,0	1/1:22,0:22:55.40:620,55,0	1/1:2,25:27:55.73:712,56,0	1/1:26,0:26:44.45:649,44,0	1/1:19,0:19:54.17:672,54,0	1/1:31,0:31:81.26:1010,81,0	1/1:23,0:23:22.04:133,22,0	1/1:23,0:23:4.30:90,4,0	1/1:1,15:16:33.06:414,33,0	1/1:19,0:19:52.62:568,53,0	1/1:30,0:30:84.59:959,85,0	1/1:17,0:17:34.35:418,34,0	1/1:0,25:25:65.93:781,66,0	1/1:2,20:22:57.17:728,57,0	1/1:0,8:8:24.08:314,24,0	1/1:17,0:17:48.15:601,48,0	1/1:31,0:31:88.14:1026,88,0	1/1:30,0:30:72.23:897,72,0	1/1:8,0:8:21.07:259,21,0
chr10	58433983	.	C	CAG	4485.29	PASS	AB=0.923;AC=46;AF=0.821;AN=56;BaseQRankSum=-2.868;DP=676;FS=24.502;HRun=0;HaplotypeScore=183.8223;InbreedingCoeff=0.0948;MQ=46.66;MQ0=24;MQRankSum=4.994;QD=6.93;ReadPosRankSum=3.920;VQSLOD=2.6037;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:33,0:31:27.62:219,28,0	1/1:9,0:9:18.05:259,18,0	0/0:14,0:2:5.87:0,6,40	0/0:15,0:2:2.99:0,3,24	1/1:27,0:27:27.42:220,27,0	1/1:19,0:19:19.15:111,19,0	1/1:34,0:33:54.17:419,54,0	1/1:45,0:42:38.34:568,38,0	1/1:23,0:23:4.04:48,4,0	0/1:34,0:32:22.48:192,0,22	1/1:27,0:26:8.08:115,8,0	1/1:23,0:22:28.92:181,29,0	1/1:27,0:26:5.41:135,5,0	0/1:24,0:22:19.48:130,0,19	1/1:19,0:19:16.02:126,16,0	0/1:3,16:19:3.39:28,0,3	1/1:17,0:15:17.73:206,18,0	1/1:22,0:21:0.98:91,1,0	0/1:21,0:21:40.98:81,0,41	1/1:31,0:30:26.08:219,26,0	1/1:36,0:32:19.56:155,20,0	1/1:13,0:13:19.34:116,19,0	1/1:13,0:12:10.23:76,10,0	1/1:36,0:34:35.38:294,35,0	0/1:18,0:18:43.04:69,0,43	1/1:32,0:30:7.05:219,7,0	0/1:29,0:27:25.55:192,0,26	1/1:15,0:14:3.42:16,3,0
chr10	58434003	.	C	CAGAGAGAG	4690.52	PASS	AB=1.000;AC=26;AF=0.500;AN=52;BaseQRankSum=-6.970;DP=581;FS=21.744;HRun=0;HaplotypeScore=233.4296;InbreedingCoeff=-0.3709;MQ=45.48;MQ0=16;MQRankSum=-2.879;QD=9.94;ReadPosRankSum=-3.462;VQSLOD=1.7802;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:24:78.94:112,0,79	0/0:9,0:9:15.05:0,15,226	./.	./.	0/1:23,0:23:24.18:24,0,61	0/1:17,0:17:29.23:29,0,78	1/1:24,0:23:6.17:133,6,0	0/0:30,0:29:15.95:0,16,300	0/0:25,0:25:14.95:0,15,116	0/1:35,0:34:99:911,0,140	0/1:25,0:24:24.95:122,0,25	1/1:16,0:15:3.98:77,4,0	0/1:26,0:25:88.62:179,0,89	0/1:20,0:19:99:455,0,123	0/0:10,6:20:13.69:0,14,70	0/1:18,0:17:41.36:112,0,41	0/1:19,0:17:84.55:101,0,85	0/1:21,0:20:41.25:41,0,304	0/1:27,0:26:73.95:335,0,74	0/0:25,0:24:29.78:0,30,166	0/1:27,0:25:69.10:69,0,187	1/1:10,0:10:0.94:22,1,0	1/1:13,0:12:0.94:2,1,0	1/1:29,0:27:2.86:62,3,0	0/1:19,0:19:55.73:406,0,56	0/1:33,0:31:99:951,0,148	0/1:27,0:25:62.01:297,0,62	0/1:17,0:16:66.01:252,0,66
chr10	58434007	.	G	GAGAGAGAC	6143.58	PASS	AB=0.953;AC=33;AF=0.635;AN=52;BaseQRankSum=1.542;DP=604;FS=8.161;HRun=0;HaplotypeScore=233.5186;InbreedingCoeff=0.2939;MQ=44.62;MQ0=17;MQRankSum=0.319;QD=12.02;ReadPosRankSum=1.225;VQSLOD=2.3583;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:25:4.84:208,5,0	0/0:8,0:8:14.98:0,15,124	./.	./.	1/1:23,0:22:17.83:177,18,0	0/0:20,0:20:14.18:0,14,106	1/1:23,0:22:10.35:120,10,0	0/0:37,0:36:63.66:0,64,402	0/1:6,13:23:0.27:0,0,0	1/1:36,0:35:85.60:1197,86,0	0/1:26,0:25:11.47:268,0,11	0/1:18,0:17:39.84:40,0,190	0/1:28,0:27:13.27:310,0,13	1/1:19,0:18:11.40:349,11,0	1/1:20,0:20:11.74:99,12,0	0/1:21,0:20:18.56:176,0,19	0/1:20,0:18:50.96:148,0,51	0/1:20,0:19:92.49:92,0,122	1/1:32,0:31:60.94:617,61,0	1/1:22,0:21:20.86:165,21,0	1/1:27,0:25:34.95:296,35,0	0/0:10,0:10:12.93:0,13,101	0/0:14,0:13:0.66:0,1,22	0/1:29,0:28:1.39:1,0,211	1/1:19,0:19:10.11:417,10,0	0/1:34,0:32:0.27:906,0,0	1/1:27,0:25:31.10:254,31,0	1/1:17,0:16:22.78:302,23,0
chr10	58434048	.	A	AGT	1606.60	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=5.422;DP=540;FS=1.688;HRun=0;HaplotypeScore=114.8117;InbreedingCoeff=0.8818;MQ=78.76;MQ0=9;MQRankSum=-1.373;QD=16.56;ReadPosRankSum=0.095;VQSLOD=3.4227;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:44.80:0,45,311	0/0:2,0:2:3:0,3,25	0/0:32,0:25:68.54:0,69,684	0/0:39,0:22:52.88:0,53,534	0/0:16,0:16:32.34:0,32,251	1/1:19,0:18:41.89:360,42,0	1/1:14,0:14:32.81:381,33,0	0/0:45,0:44:99:0,122,1110	0/0:20,0:20:24.23:0,24,266	0/0:26,0:26:49.32:0,49,506	0/0:22,0:22:31.76:0,32,286	1/1:15,0:15:41.95:370,42,0	0/0:21,0:20:50.16:0,50,441	0/0:18,0:18:47.64:0,48,458	0/0:15,0:15:18.41:0,18,159	0/0:15,0:15:39.32:0,39,294	0/0:16,0:16:24.90:0,25,157	1/1:20,0:20:56.84:515,57,0	0/0:22,0:22:57.75:0,58,519	0/0:17,0:16:38.54:0,39,312	0/0:13,0:12:21.01:0,21,172	1/1:1,0:7:2.91:21,3,0	0/0:1,0:13:1.24:0,1,3	1/1:1,21:22:8.82:135,9,0	0/0:18,0:18:37.43:0,37,317	0/0:24,0:24:53.90:0,54,409	0/0:19,0:18:32.86:0,33,323	0/0:9,0:9:23.45:0,23,193
chr10	58434245	.	CT	C	2428.15	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=4.066;DP=546;FS=3.049;HRun=9;HaplotypeScore=71.2443;InbreedingCoeff=0.7903;MQ=74.94;MQ0=0;MQRankSum=0.646;QD=19.74;ReadPosRankSum=-1.789;VQSLOD=3.4604;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:57.16:0,57,648	1/1:2,12:14:39.02:355,39,0	0/0:14,1:15:30.08:0,30,334	0/1:9,0:9:12.56:13,0,94	0/0:24,0:24:63.19:0,63,727	0/0:22,2:24:5.46:0,5,568	0/0:15,0:15:42.11:0,42,474	1/1:7,36:43:99:989,108,0	0/0:15,0:15:39.12:0,39,450	0/0:25,0:26:65.99:0,66,725	0/0:21,2:23:8.24:0,8,588	0/0:23,0:23:63.19:0,63,727	0/0:13,0:13:36.11:0,36,415	0/0:16,0:17:47.97:0,48,534	0/0:17,0:17:51.14:0,51,579	1/1:3,20:23:60.03:549,60,0	1/1:4,30:34:75.04:686,75,0	0/0:21,0:21:54.12:0,54,609	0/0:23,0:23:63.19:0,63,727	0/0:16,0:17:50.98:0,51,564	0/0:20,1:21:3.42:0,3,524	0/0:11,0:11:27.07:0,27,303	0/0:13,0:13:36.07:0,36,401	0/0:11,0:10:24.06:0,24,267	0/0:20,0:20:54.16:0,54,623	0/0:22,0:23:60.01:0,60,672	0/0:26,0:27:66.03:0,66,741	0/0:5,0:5:12.04:0,12,138
chr10	58434490	.	G	GA	15691.92	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-3.890;DP=632;FS=2.789;HRun=9;HaplotypeScore=68.0672;InbreedingCoeff=0.9342;MQ=75.64;MQ0=0;MQRankSum=-3.821;QD=25.85;ReadPosRankSum=2.051;VQSLOD=5.6037;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,26:32:77.88:825,78,0	1/1:0,5:5:15.04:166,15,0	0/0:13,0:13:28.23:0,28,236	0/0:12,0:12:11.96:0,12,102	1/1:6,23:29:69.11:737,69,0	1/1:3,27:30:55.16:837,55,0	1/1:6,15:21:22.07:468,22,0	1/1:9,19:29:13.90:565,14,0	1/1:2,15:17:39.11:431,39,0	1/1:5,20:25:57.15:628,57,0	1/1:5,16:21:22.03:458,22,0	1/1:6,23:30:19.96:659,20,0	1/1:3,23:26:66.14:717,66,0	1/1:1,25:26:52.15:804,52,0	1/1:3,29:32:78.21:863,78,0	1/1:7,22:29:57.15:631,57,0	1/1:1,12:13:36.10:398,36,0	1/1:3,6:9:21.06:232,21,0	1/1:3,22:25:43.10:687,43,0	1/1:7,16:23:49.02:533,49,0	1/1:1,17:18:45.12:498,45,0	1/1:1,17:18:48.13:531,48,0	1/1:5,19:24:57.15:630,57,0	1/1:3,13:16:10.04:339,10,0	1/1:1,33:34:90.24:995,90,0	1/1:7,28:34:81.20:886,81,0	1/1:3,25:28:72.19:790,72,0	1/1:1,11:12:36.06:385,36,0
chr10	58437702	.	GTGTGTGTGTGGTGTGTGTGTGTGTGTGTGTGTA	G	604.49	PASS	AB=0.938;AC=5;AF=0.093;AN=54;BaseQRankSum=1.323;DP=497;FS=1.537;HRun=0;HaplotypeScore=186.4721;InbreedingCoeff=-0.1306;MQ=32.96;MQ0=85;MQRankSum=-2.029;QD=5.04;ReadPosRankSum=1.933;VQSLOD=2.7095;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:16:3:0,3,25	./.	0/0:28,0:6:6.02:0,6,108	0/0:22,0:5:8.17:0,8,406	0/0:17,0:15:5.99:0,6,49	0/0:6,0:5:0:0,0,0	0/0:15,0:14:2.97:0,3,20	0/1:18,0:12:37.21:37,0,303	0/0:13,0:8:11.82:0,12,155	0/0:16,0:5:11.96:0,12,286	0/0:11,0:5:6.02:0,6,90	0/1:39,0:38:99:425,0,110	0/0:18,0:11:12.03:0,12,273	0/0:20,0:11:9.02:0,9,231	0/0:11,0:6:3.01:0,3,30	0/0:17,0:15:7.27:0,7,144	0/1:27,0:16:18.50:19,0,68	0/0:11,0:9:11.56:0,12,88	0/0:10,0:7:15.42:0,15,541	0/0:16,0:7:3.01:0,3,133	0/0:35,0:19:8.31:0,8,206	0/0:12,0:8:3.01:0,3,51	0/1:10,8:16:19.06:226,0,19	0/0:16,0:15:3.01:0,3,130	0/0:28,0:14:6.02:0,6,181	0/0:21,0:15:31.76:0,32,964	0/1:18,0:6:3.43:3,0,129	0/0:8,0:3:3.01:0,3,105
chr10	58437704	.	GTGTGTGTGGTGTGTGTGTGTGTGTGTGTGTA	G	1110.67	PASS	AB=0.929;AC=13;AF=0.260;AN=50;BaseQRankSum=-2.914;DP=510;FS=0.000;HRun=0;HaplotypeScore=174.6590;InbreedingCoeff=0.1731;MQ=30.81;MQ0=93;MQRankSum=-2.206;QD=6.35;ReadPosRankSum=0.048;VQSLOD=2.5555;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:26,0:5:3.01:0,3,63	0/0:24,0:4:8.17:0,8,343	./.	1/1:9,0:8:2.96:56,3,0	1/1:22,0:21:8.98:88,9,0	0/1:16,0:10:99:155,0,142	0/0:12,0:7:4.01:0,4,62	0/0:16,0:5:11.20:0,11,191	0/0:12,0:5:4.83:0,5,38	0/1:16,20:35:99:456,0,106	0/0:19,0:9:8.99:0,9,159	0/0:21,0:11:6.49:0,6,149	0/0:11,0:6:1.55:0,2,4	0/0:13,0:11:6.80:0,7,91	0/1:25,0:14:44.11:44,0,64	1/1:13,0:11:8.98:167,9,0	0/0:12,0:7:14.90:0,15,416	0/0:16,0:7:3.01:0,3,105	0/0:34,0:18:4.37:0,4,135	0/1:17,0:11:0.47:0,0,24	1/1:18,0:15:2.85:199,3,0	0/0:19,0:18:3.06:0,3,101	0/0:28,0:14:6.01:0,6,114	0/0:21,0:15:23.98:0,24,677	0/1:19,0:7:83.15:83,0,84	0/0:8,0:3:3.01:0,3,74
chr10	58437706	.	GTGTGTGGTGTGTGTGTGTGTGTGTGTGTA	G	1503.56	PASS	AB=1.000;AC=21;AF=0.420;AN=50;BaseQRankSum=-3.676;DP=520;FS=3.648;HRun=0;HaplotypeScore=164.5478;InbreedingCoeff=-0.0665;MQ=30.22;MQ0=97;MQRankSum=-1.999;QD=5.17;ReadPosRankSum=0.072;VQSLOD=2.4152;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:24,0:4:3.01:0,3,63	0/0:27,0:5:11.18:0,11,340	./.	1/1:9,0:8:3.01:56,3,0	1/1:25,0:24:6.37:64,6,0	0/1:15,0:9:75.86:182,0,76	0/1:10,0:5:23.47:33,0,23	0/1:17,0:6:64.85:65,0,102	0/1:12,0:5:0.74:16,0,1	0/1:34,0:33:89.42:408,0,89	0/0:19,0:9:6.02:0,6,96	0/1:22,0:12:68.20:68,0,92	1/1:11,0:6:2.98:22,3,0	0/0:13,0:11:5.79:0,6,36	0/1:26,0:15:37.57:130,0,38	1/1:14,0:12:13.29:228,13,0	0/0:12,0:7:11.38:0,11,295	0/0:16,0:7:3.01:0,3,81	0/0:35,0:19:3:0,3,105	0/1:19,0:12:3.02:61,0,3	1/1:18,0:14:2.99:185,3,0	0/1:20,0:19:0.81:1,0,73	0/0:27,0:13:3.01:0,3,62	0/1:20,0:14:17.28:17,0,502	0/1:19,0:7:59.43:110,0,59	0/0:7,0:2:3.01:0,3,53
chr10	58437711	.	TG	T	2100.91	PASS	AB=0.672;AC=44;AF=0.880;AN=50;BaseQRankSum=-1.510;DP=464;FS=7.232;HRun=2;HaplotypeScore=58.9303;InbreedingCoeff=0.2397;MQ=31.00;MQ0=104;MQRankSum=2.592;QD=5.72;ReadPosRankSum=1.646;VQSLOD=0.5787;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:26,0:2:6.02:0,6,79	0/0:30,0:5:12.51:0,13,160	./.	1/1:1,6:6:3.01:38,3,0	1/1:4,18:19:8.96:115,9,0	0/1:10,5:9:20.01:175,0,20	1/1:3,7:5:11.98:133,12,0	1/1:8,9:6:15.05:190,15,0	1/1:5,7:5:5.95:57,6,0	1/1:22,1:22:6.95:38,7,0	1/1:3,14:7:6.02:75,6,0	1/1:7,13:10:11.98:133,12,0	1/1:1,10:6:2.96:19,3,0	1/1:1,10:9:5.78:76,6,0	1/1:10,15:14:11.89:133,12,0	1/1:1,8:7:12.04:152,12,0	1/1:3,8:6:12.03:141,12,0	1/1:3,13:7:3.01:38,3,0	1/1:10,22:17:6.02:76,6,0	1/1:3,12:8:7.84:81,8,0	1/1:12,1:8:3.01:38,3,0	1/1:2,7:8:3.29:39,3,0	1/1:8,17:11:3.01:37,3,0	0/1:6,13:13:0.26:298,0,0	1/1:6,13:7:10.23:99,10,0	1/1:2,6:2:3.01:38,3,0
chr10	58437717	.	GTGTGTGTGTGTGTGTGTA	G	1674.54	PASS	AB=0.979;AC=30;AF=0.556;AN=54;BaseQRankSum=4.470;DP=458;FS=4.875;HRun=0;HaplotypeScore=93.8245;InbreedingCoeff=0.0379;MQ=31.57;MQ0=102;MQRankSum=-1.962;QD=5.14;ReadPosRankSum=5.643;VQSLOD=0.9546;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:9:8.52:0,9,41	0/0:4,0:3:2.84:0,3,14	0/0:26,0:2:6.02:0,6,178	0/0:34,0:6:15.05:0,15,434	./.	1/1:8,0:6:2.94:18,3,0	1/1:22,0:19:1.70:63,2,0	0/1:14,0:8:3.18:80,0,3	1/1:9,1:5:9.40:174,9,0	0/1:19,0:8:4.64:50,0,5	0/1:11,1:5:7.91:125,0,8	0/1:23,0:22:40.83:246,0,41	1/1:16,0:6:0.47:1,0,0	1/1:18,1:9:8.53:166,9,0	0/1:10,1:6:17.89:122,0,18	0/0:11,0:9:7.97:0,8,42	0/1:23,0:14:28.64:166,0,29	0/1:9,0:7:4:60,0,4	0/1:12,0:7:10.11:10,0,10	0/0:15,0:6:2.84:0,3,14	1/1:31,0:15:2.64:24,3,0	1/1:16,0:9:7.80:52,8,0	0/1:13,0:9:8.06:98,0,8	0/0:12,0:12:2.54:0,3,15	1/1:24,0:10:2.68:11,3,0	0/1:18,1:13:62.90:189,0,63	1/1:18,0:7:5.14:151,5,0	1/1:7,0:1:2.96:19,3,0
chr10	58438204	.	CT	C	7524.12	PASS	AB=0.874;AC=40;AF=0.714;AN=56;BaseQRankSum=8.344;DP=600;FS=0.371;HRun=11;HaplotypeScore=65.1035;InbreedingCoeff=0.8295;MQ=69.16;MQ0=2;MQRankSum=-0.349;QD=16.72;ReadPosRankSum=2.160;VQSLOD=5.6828;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,15:19:35:277,35,0	1/1:1,10:11:23.97:197,24,0	0/0:19,0:7:9.02:0,9,89	0/0:26,0:19:23.09:0,23,167	1/1:0,28:29:79.91:645,80,0	0/0:24,0:25:75.02:0,75,780	0/0:17,1:20:26.18:0,26,451	1/1:10,22:32:62.60:514,63,0	1/1:5,22:27:59.89:492,60,0	1/1:8,19:28:52.86:418,53,0	1/1:3,20:23:50.91:418,51,0	0/0:19,0:19:51.13:0,51,544	1/1:1,16:17:44.95:369,45,0	1/1:0,21:21:56.94:468,57,0	1/1:1,19:21:49.98:400,50,0	1/1:3,15:18:9.96:288,10,0	1/1:1,16:17:44.94:369,45,0	0/1:18,6:24:87.48:87,0,375	1/1:6,17:23:50.89:415,51,0	1/1:6,21:27:62.87:515,63,0	1/1:1,14:15:35.94:296,36,0	0/1:15,1:18:4.61:5,0,293	0/0:19,0:19:51.07:0,51,513	0/0:20,0:21:62.99:0,63,649	1/1:6,19:25:38.93:320,39,0	1/1:4,15:19:44.92:366,45,0	1/1:2,26:29:35.68:491,36,0	1/1:0,7:7:20.98:172,21,0
chr10	58439171	.	T	TG	14650.70	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=9.274;DP=585;FS=4.561;HRun=1;HaplotypeScore=252.6061;InbreedingCoeff=0.9633;MQ=76.43;MQ0=0;MQRankSum=-10.819;QD=27.28;ReadPosRankSum=6.813;VQSLOD=4.0886;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,23:31:84.10:841,84,0	1/1:4,5:9:27.06:289,27,0	0/0:24,0:24:66.20:0,66,835	0/0:24,0:24:59.12:0,59,661	1/1:4,17:21:51.10:504,51,0	1/1:2,15:17:48.06:482,48,0	1/1:5,10:15:39.04:385,39,0	1/1:14,12:26:57:618,57,0	1/1:3,19:22:63.11:647,63,0	1/1:5,14:19:51.40:536,51,0	1/1:4,19:23:63.08:621,63,0	1/1:8,18:26:65.87:656,66,0	1/1:2,28:30:90.11:881,90,0	1/1:9,22:31:84.99:802,85,0	1/1:3,23:26:78.09:785,78,0	1/1:2,14:16:48.05:487,48,0	1/1:1,13:14:33.74:357,34,0	1/1:0,3:3:9.02:96,9,0	1/1:2,14:16:48.13:545,48,0	1/1:1,22:23:66.11:668,66,0	1/1:4,8:12:15.70:191,16,0	1/1:9,21:30:75.11:761,75,0	1/1:6,21:27:68.98:676,69,0	1/1:4,14:18:32.59:322,33,0	1/1:2,19:21:62.81:630,63,0	1/1:6,15:21:63.05:674,63,0	1/1:7,20:27:75.17:792,75,0	1/1:2,11:13:39.09:406,39,0
chr10	58439172	.	G	GA	8178.20	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=10.536;DP=514;FS=1.213;HRun=0;HaplotypeScore=242.2920;InbreedingCoeff=0.9528;MQ=80.96;MQ0=0;MQRankSum=-10.736;QD=17.55;ReadPosRankSum=8.000;VQSLOD=4.5421;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:23:64.87:412,65,0	1/1:8,0:8:17.71:113,18,0	0/0:24,0:24:72.23:0,72,976	0/0:24,0:24:56.50:0,57,766	1/1:17,0:17:47.18:298,47,0	1/1:15,1:17:47.25:322,47,0	1/1:10,0:10:29.48:183,29,0	1/1:17,0:17:32.45:208,32,0	1/1:20,0:20:56:352,56,0	1/1:14,2:17:50.11:328,50,0	1/1:19,1:20:59.10:400,59,0	1/1:19,0:23:60.51:376,61,0	1/1:30,0:30:82.61:519,83,0	1/1:25,2:27:76.71:507,77,0	1/1:24,0:24:70.90:471,71,0	1/1:14,2:16:47.33:332,47,0	1/1:15,0:15:33.04:217,33,0	1/1:4,0:4:9.34:58,9,0	1/1:14,0:14:41.40:273,41,0	1/1:23,0:23:64.94:413,65,0	1/1:8,0:8:12.45:92,12,0	1/1:26,0:26:64.93:414,65,0	1/1:21,1:22:64.89:420,65,0	1/1:14,0:14:23.14:149,23,0	1/1:21,0:21:58.25:363,58,0	1/1:15,3:19:53.31:378,53,0	1/1:20,0:20:58.99:372,59,0	1/1:11,0:11:32.45:209,32,0
chr10	58439173	.	TCA	T	4552.33	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=8.862;DP=509;FS=4.369;HRun=0;HaplotypeScore=260.7428;InbreedingCoeff=0.9223;MQ=81.08;MQ0=0;MQRankSum=-10.461;QD=9.87;ReadPosRankSum=7.009;VQSLOD=4.1316;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:23:50.80:194,51,0	1/1:7,0:7:14.88:72,15,0	0/0:23,0:23:61.94:0,62,1210	0/0:25,0:25:59.69:0,60,1047	1/1:17,0:17:39.71:152,40,0	1/1:17,0:17:42.18:170,42,0	1/1:11,0:11:22.20:79,22,0	1/1:12,4:16:40.45:233,40,0	1/1:20,0:20:49.34:201,49,0	1/1:17,0:17:45.50:221,45,0	1/1:20,0:20:48.37:171,48,0	1/1:21,0:21:45.86:198,46,0	1/1:30,0:30:74.52:308,75,0	1/1:26,0:26:52.28:207,52,0	1/1:24,0:24:62:245,62,0	1/1:16,0:16:42.50:175,43,0	1/1:16,0:16:29.54:128,30,0	1/1:4,0:4:11.28:55,11,0	1/1:15,0:15:42.67:220,43,0	1/1:23,0:23:53.50:215,54,0	1/1:8,0:8:6.19:47,6,0	1/1:24,0:24:52.19:204,52,0	1/1:22,0:22:54.47:191,54,0	1/1:13,0:13:22.08:86,22,0	1/1:21,0:21:47:201,47,0	1/1:19,0:19:52.33:257,52,0	1/1:20,0:20:50.52:195,51,0	1/1:11,0:11:29.94:128,30,0
chr10	58439175	.	A	ATAT	28352.68	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=6.754;DP=580;FS=0.000;HRun=0;HaplotypeScore=215.2245;InbreedingCoeff=0.9777;MQ=76.94;MQ0=0;MQRankSum=-10.753;QD=53.29;ReadPosRankSum=6.058;VQSLOD=5.0132;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,21:29:69.24:1373,69,0	1/1:3,5:8:18.06:346,18,0	0/0:23,0:23:66.17:0,66,1179	0/0:25,0:25:59.99:0,60,1035	1/1:2,17:19:48.16:936,48,0	1/1:5,15:20:48.16:962,48,0	1/1:10,9:19:48.08:927,48,0	1/1:9,12:21:57.16:1102,57,0	1/1:3,18:21:60.21:1165,60,0	1/1:7,15:22:60.21:1244,60,0	1/1:3,19:22:60.21:1194,60,0	1/1:6,19:25:72.25:1429,72,0	1/1:5,27:33:96.32:1823,96,0	1/1:7,22:30:87.30:1717,87,0	1/1:6,23:29:81.28:1607,81,0	1/1:4,14:18:51.17:1028,51,0	1/1:6,13:19:51.11:909,51,0	1/1:1,3:4:12.04:221,12,0	1/1:7,13:20:57.19:1116,57,0	1/1:2,21:23:69.15:1298,69,0	1/1:6,5:11:21.04:343,21,0	1/1:4,21:25:66.23:1286,66,0	1/1:1,22:23:66.23:1294,66,0	1/1:2,11:13:27.56:514,28,0	1/1:3,19:22:63.11:1184,63,0	1/1:6,15:22:66.23:1349,66,0	1/1:3,20:23:66.23:1323,66,0	1/1:0,11:11:33.11:665,33,0
chr10	58441999	.	TA	T	12082.49	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-0.686;DP=570;FS=15.850;HRun=9;HaplotypeScore=57.8382;InbreedingCoeff=0.9825;MQ=68.15;MQ0=0;MQRankSum=-4.695;QD=22.13;ReadPosRankSum=4.455;VQSLOD=4.0293;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,23:28:46.36:581,46,0	1/1:2,8:10:24.01:220,24,0	0/0:12,0:12:21.06:0,21,238	0/0:12,0:12:13.66:0,14,124	1/1:3,23:26:62.63:548,63,0	1/1:2,18:20:45.01:412,45,0	1/1:0,16:16:36.02:329,36,0	1/1:2,20:22:60.03:549,60,0	1/1:1,15:16:42.02:384,42,0	1/1:3,28:31:84.02:760,84,0	1/1:4,13:17:44.97:399,45,0	1/1:1,16:17:45.02:412,45,0	1/1:2,18:20:40.16:429,40,0	1/1:0,17:17:45.02:412,45,0	1/1:6,25:31:69.02:631,69,0	1/1:6,17:23:51.01:467,51,0	1/1:5,27:32:71.98:649,72,0	1/1:1,12:13:23.94:220,24,0	1/1:4,20:24:60.03:549,60,0	1/1:1,31:32:93.05:851,93,0	1/1:1,12:13:33.02:302,33,0	1/1:0,13:13:32.97:294,33,0	1/1:5,15:20:39.02:357,39,0	1/1:5,10:15:27:247,27,0	1/1:4,28:32:75.04:686,75,0	1/1:2,22:24:66.03:600,66,0	1/1:2,24:26:63.03:576,63,0	1/1:0,8:8:24.01:220,24,0
chr10	58442359	.	CTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	C	1530.03	PASS	AB=0.870;AC=6;AF=0.130;AN=46;BaseQRankSum=4.222;DP=402;FS=2.697;HRun=0;HaplotypeScore=213.3537;InbreedingCoeff=0.1239;MQ=36.05;MQ0=34;MQRankSum=-2.131;QD=18.43;ReadPosRankSum=2.488;VQSLOD=2.3375;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:11:2.94:0,3,18	0/1:6,0:9:37.19:445,0,37	./.	./.	0/0:7,0:12:3.90:0,4,104	0/1:16,4:17:0.88:1,0,14	0/0:14,0:13:2.22:0,2,7	0/0:13,0:12:19.61:0,20,289	0/0:22,0:21:23.99:0,24,2376	0/0:23,0:23:42.14:0,42,3915	0/0:6,0:5:3.01:0,3,359	1/1:8,8:17:14.16:1057,14,0	0/0:16,0:14:27.09:0,27,2776	0/0:19,0:19:13.40:0,13,1446	0/0:19,0:18:20.69:0,21,2316	0/1:16,0:15:24.68:25,0,97	0/1:19,0:14:99:115,0,310	./.	0/0:27,0:24:53.34:0,53,3769	0/0:19,0:16:9.03:0,9,1071	0/0:19,0:10:2.86:0,3,8	0/0:9,0:9:2.96:0,3,19	./.	0/0:15,1:12:3:0,3,25	0/0:18,0:18:15.05:0,15,1910	0/0:21,0:19:39.13:0,39,3947	0/0:13,0:11:18.01:0,18,1363	./.
chr10	58446595	.	C	CATGTATGTATGT	11090.51	PASS	AC=26;AF=0.481;AN=54;BaseQRankSum=6.384;DP=768;FS=19.179;HRun=0;HaplotypeScore=289.7462;InbreedingCoeff=0.9207;MQ=57.11;MQ0=6;MQRankSum=-8.353;QD=30.64;ReadPosRankSum=-3.234;VQSLOD=2.7044;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:32,0:32:5.87:91,6,0	1/1:4,0:11:9.03:439,9,0	./.	0/0:19,0:12:4.16:0,4,57	1/1:34,0:34:2.96:114,3,0	1/1:29,0:30:18.01:660,18,0	1/1:22,0:22:11.65:473,12,0	1/1:46,0:42:48.14:1216,48,0	0/0:19,0:19:45.15:0,45,1453	0/0:23,0:23:39.13:0,39,1140	0/0:24,0:24:45.14:0,45,1250	1/1:27,0:30:17.74:785,18,0	0/0:34,0:34:69.22:0,69,2223	0/0:30,0:30:51.14:0,51,1512	0/0:33,0:33:60.19:0,60,1821	1/1:21,12:35:44.89:2589,45,0	1/1:13,0:16:18.06:887,18,0	1/1:21,2:23:30.10:1113,30,0	0/0:24,0:24:29.97:0,30,966	0/0:40,0:40:60.15:0,60,1632	0/0:26,0:26:63.15:0,63,1643	1/1:23,0:25:23.58:1029,24,0	1/1:30,0:32:23.75:1117,24,0	1/1:19,0:23:18.04:577,18,0	0/0:36,0:37:66.21:0,66,1973	0/0:24,0:24:48.12:0,48,1445	0/0:27,0:27:51.10:0,51,1509	0/0:24,0:24:48.16:0,48,1472
chr10	58446646	.	A	AGTGT	7622.80	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-5.694;DP=811;FS=12.931;HRun=0;HaplotypeScore=208.0368;InbreedingCoeff=0.9793;MQ=53.98;MQ0=2;MQRankSum=-0.956;QD=37.37;ReadPosRankSum=-2.355;VQSLOD=3.4854;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:25:51.30:0,51,836	0/0:11,0:10:20.77:0,21,248	0/0:9,0:3:7.58:0,8,107	0/0:13,0:7:12.03:0,12,176	0/0:40,0:42:71.55:0,72,1160	1/1:5,20:27:43.58:1066,44,0	1/1:9,20:30:53.29:1297,53,0	0/0:35,0:36:75.22:0,75,1146	0/0:29,0:29:72.25:0,72,1232	0/0:41,0:41:99:0,102,1680	0/0:24,0:24:63.03:0,63,1069	1/1:8,20:30:25.30:889,25,0	0/0:38,0:39:96.32:0,96,1614	0/0:36,0:36:84.25:0,84,1385	0/0:46,0:46:99:0,117,1990	0/0:34,0:34:53.29:0,53,838	0/0:21,0:21:39:0,39,666	1/1:5,13:24:40.05:1048,40,0	0/0:19,0:20:42.14:0,42,692	0/0:35,0:35:90.29:0,90,1500	0/0:43,0:43:99:0,120,2039	1/1:6,24:32:51.74:1269,52,0	1/1:9,23:35:44.75:1136,45,0	1/1:4,20:26:38.16:917,38,0	0/0:25,0:25:57.19:0,57,970	0/0:31,0:31:75.26:0,75,1261	0/0:30,0:30:75.24:0,75,1204	0/0:15,0:15:39.13:0,39,664
chr10	58449040	.	G	GTGGGACACAC	47563.31	PASS	AB=0.681;AC=51;AF=0.911;AN=56;BaseQRankSum=-5.468;DP=834;FS=0.866;HRun=0;HaplotypeScore=206.6668;InbreedingCoeff=0.7483;MQ=50.83;MQ0=0;MQRankSum=-5.252;QD=59.98;ReadPosRankSum=5.152;VQSLOD=4.0935;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:28,18:57:48.16:2175,48,0	1/1:5,11:18:30.10:1509,30,0	0/0:19,0:18:33.05:0,33,663	0/0:22,0:20:18.10:0,18,593	1/1:7,15:30:36.12:1607,36,0	1/1:9,9:22:24.08:1208,24,0	1/1:14,7:30:24.08:988,24,0	1/1:46,0:46:72.25:2368,72,0	1/1:7,14:25:42.14:2113,42,0	1/1:14,19:40:75.22:2934,75,0	1/1:6,11:23:27.09:1245,27,0	1/1:20,23:46:75.26:3656,75,0	1/1:11,24:39:69.71:3458,70,0	1/1:18,16:39:48.16:2414,48,0	1/1:6,23:33:63.22:3149,63,0	1/1:17,19:40:51.17:2455,51,0	1/1:16,7:23:18.06:899,18,0	1/1:7,6:14:18.06:908,18,0	0/1:17,7:32:8.27:1739,0,8	1/1:10,18:32:54.19:2453,54,0	1/1:23,5:39:6.02:258,6,0	1/1:10,11:23:30.10:1483,30,0	1/1:12,6:24:18.53:810,19,0	1/1:14,7:25:15.05:564,15,0	1/1:10,15:29:42.14:2090,42,0	1/1:14,14:30:50.94:2218,51,0	1/1:8,8:18:30.10:1502,30,0	1/1:4,10:16:27.09:1360,27,0
chr10	58449841	.	A	AT	8948.99	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-5.714;DP=521;FS=10.202;HRun=1;HaplotypeScore=92.7547;InbreedingCoeff=0.9653;MQ=80.30;MQ0=0;MQRankSum=-1.893;QD=26.24;ReadPosRankSum=0.974;VQSLOD=3.7188;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:1.77:0,2,194	1/1:0,7:8:17.64:179,18,0	0/0:18,0:17:45.02:0,45,578	0/0:14,0:14:38.45:0,38,513	0/0:21,0:21:60.91:0,61,339	0/0:25,0:25:43.28:0,43,350	0/0:6,0:6:17.33:0,17,93	1/1:8,26:33:73.46:854,73,0	1/1:1,22:23:52.56:607,53,0	1/1:5,19:24:58.35:653,58,0	1/1:0,22:22:58.35:647,58,0	0/0:16,0:16:21.62:0,22,216	1/1:0,20:20:57.15:622,57,0	1/1:3,17:20:30.17:455,30,0	1/1:3,15:18:42.59:461,43,0	1/1:1,17:20:44.65:458,45,0	1/1:1,17:18:41.01:463,41,0	0/0:15,0:14:37.99:0,38,231	1/1:1,16:18:44.55:476,45,0	1/1:2,24:26:50.16:715,50,0	1/1:5,16:21:47.98:529,48,0	0/0:16,0:16:44.05:0,44,244	0/0:16,0:17:40.31:0,40,211	0/0:13,0:13:33.09:0,33,181	1/1:1,21:22:51.86:588,52,0	1/1:3,16:19:41.60:469,42,0	1/1:1,21:22:52.98:607,53,0	1/1:1,4:6:17.70:168,18,0
chr10	58450476	.	CCT	C	1901.19	PASS	AC=52;AF=0.963;AN=54;BaseQRankSum=5.527;DP=243;FS=6.192;HRun=0;HaplotypeScore=284.2065;InbreedingCoeff=0.4231;MQ=76.25;MQ0=0;MQRankSum=-4.840;QD=8.30;ReadPosRankSum=5.185;VQSLOD=2.5023;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,8:8:19.95:74,20,0	1/1:0,2:2:5.34:22,5,0	1/1:7,0:7:3.42:43,3,0	0/0:14,0:13:18.11:0,18,125	1/1:0,6:6:9.85:27,10,0	1/1:0,10:10:21.94:81,22,0	1/1:0,9:9:17.96:58,18,0	./.	1/1:0,12:12:23.09:83,23,0	1/1:0,6:6:17.09:98,17,0	1/1:0,10:10:0.37:32,0,0	1/1:0,22:22:40.80:153,41,0	1/1:0,16:16:33.96:111,34,0	1/1:0,10:10:8.61:48,9,0	1/1:0,14:14:31.79:107,32,0	1/1:0,11:11:26.54:95,27,0	1/1:0,9:9:23.67:111,24,0	1/1:0,4:4:11.69:70,12,0	1/1:0,3:3:8.66:51,9,0	1/1:0,4:4:9.38:33,9,0	1/1:0,3:3:6.93:45,7,0	1/1:0,4:4:8.21:26,8,0	1/1:0,3:3:6.94:22,7,0	1/1:1,8:9:8.31:51,8,0	1/1:0,11:11:26.38:97,26,0	1/1:0,19:19:51.46:269,51,0	1/1:0,12:12:30.37:131,30,0	1/1:1,4:5:11.16:67,11,0
chr10	58450482	.	T	TG	3036.64	PASS	AB=1.000;AC=51;AF=0.944;AN=54;BaseQRankSum=4.612;DP=236;FS=2.482;HRun=0;HaplotypeScore=271.5002;InbreedingCoeff=0.5595;MQ=59.58;MQ0=0;MQRankSum=-2.734;QD=13.38;ReadPosRankSum=4.775;VQSLOD=4.0473;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,8:8:23.22:128,23,0	1/1:0,2:2:5.81:32,6,0	0/1:5,0:5:1.99:2,0,12	0/0:9,0:8:17.31:0,17,178	1/1:0,6:6:17.04:82,17,0	1/1:0,10:10:25.69:134,26,0	1/1:0,9:9:24.92:114,25,0	./.	1/1:0,12:12:32.51:158,33,0	1/1:0,6:6:17.64:115,18,0	1/1:0,10:10:18.81:110,19,0	1/1:0,22:22:60.74:297,61,0	1/1:0,16:16:44.31:212,44,0	1/1:0,10:10:22.80:116,23,0	1/1:0,14:14:39.79:199,40,0	1/1:0,11:11:31.38:159,31,0	1/1:0,9:9:26.05:143,26,0	1/1:0,4:4:11.85:82,12,0	1/1:0,3:3:8.89:60,9,0	1/1:0,3:4:5.73:43,6,0	1/1:0,3:3:3.81:16,4,0	1/1:0,4:4:11.51:60,12,0	1/1:0,3:3:8.37:40,8,0	1/1:1,8:9:15.33:81,15,0	1/1:0,11:11:31.17:160,31,0	1/1:0,19:19:53.05:334,53,0	1/1:0,12:12:34.65:193,35,0	1/1:1,4:5:11.38:81,11,0
chr10	58451732	.	T	TGCTCGC	2916.86	PASS	AB=0.750;AC=15;AF=0.278;AN=54;BaseQRankSum=-0.406;DP=583;FS=2.354;HRun=0;HaplotypeScore=155.2559;InbreedingCoeff=0.5382;MQ=75.00;MQ0=10;MQRankSum=-3.681;QD=13.57;ReadPosRankSum=0.438;VQSLOD=2.7997;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:11,0:38:12.78:109,0,13	0/0:15,0:15:42.13:0,42,653	0/0:27,0:21:52.54:0,53,993	0/0:50,0:33:80.49:0,80,1627	0/1:18,0:18:39.88:217,0,40	1/1:10,0:10:23.94:448,24,0	0/1:6,0:29:11.76:377,0,12	0/0:18,0:18:40.42:0,40,656	0/0:22,0:22:46.11:0,46,939	0/0:23,0:23:66.22:0,66,1086	0/0:11,0:11:23.68:0,24,375	1/1:19,0:19:41.80:718,42,0	0/0:16,0:16:35.39:0,35,598	0/0:22,0:21:57.03:0,57,820	0/0:21,0:22:53.90:0,54,795	0/1:19,0:19:15.74:16,0,34	0/0:27,0:27:56.08:0,56,926	0/1:7,12:20:23.81:106,0,24	0/0:15,0:15:32.94:0,33,438	0/0:11,0:10:29.95:0,30,342	0/0:31,0:29:74.71:0,75,1089	1/1:17,0:16:29.58:482,30,0	1/1:14,0:13:20.92:537,21,0	1/1:10,20:30:8.70:89,9,0	0/0:23,0:21:57.17:0,57,883	0/0:24,0:23:66.12:0,66,1027	0/0:11,0:11:33.09:0,33,487	./.
chr10	58451735	.	G	GCGCA	4004.19	PASS	AB=1.000;AC=37;AF=0.685;AN=54;BaseQRankSum=-8.713;DP=564;FS=17.619;HRun=0;HaplotypeScore=130.3608;InbreedingCoeff=0.0014;MQ=71.35;MQ0=12;MQRankSum=1.366;QD=8.63;ReadPosRankSum=5.387;VQSLOD=1.5385;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:38,0:38:7.73:62,8,0	1/1:14,0:14:4.42:155,4,0	0/0:25,0:19:38.98:0,39,368	0/0:47,0:30:65.79:0,66,638	1/1:17,0:17:20.82:164,21,0	0/1:11,0:10:16.35:58,0,16	0/1:27,0:27:15.94:60,0,16	1/1:18,0:18:45.54:322,46,0	0/1:20,0:20:44.34:144,0,44	1/1:24,0:24:6.90:329,7,0	0/1:11,0:11:5.33:80,0,5	0/1:17,0:17:19.32:99,0,19	0/1:16,0:16:44.05:65,0,44	1/1:22,0:21:1.44:203,1,0	0/1:22,0:22:32.18:179,0,32	1/1:3,14:18:8.75:236,9,0	0/1:29,0:29:11.99:237,0,12	0/1:15,0:15:11.96:12,0,25	1/1:14,0:14:31.11:194,31,0	0/1:12,0:11:8.34:81,0,8	1/1:32,0:30:25.71:374,26,0	0/1:17,0:15:7.36:72,0,7	1/1:13,0:11:17.45:112,17,0	0/0:28,0:28:8.17:0,8,36	1/1:22,0:20:34.04:312,34,0	1/1:23,0:22:3.97:270,4,0	1/1:12,0:12:15.21:185,15,0	./.
chr10	58451737	.	GCACACACA	G	925.28	PASS	AB=0.882;AC=15;AF=0.300;AN=50;BaseQRankSum=6.623;DP=562;FS=19.469;HRun=0;HaplotypeScore=157.8354;InbreedingCoeff=0.6339;MQ=68.88;MQ0=13;MQRankSum=-4.462;QD=6.66;ReadPosRankSum=-0.936;VQSLOD=1.4651;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:11.78:0,12,344	0/1:13,0:15:58.19:58,0,80	./.	./.	0/0:16,0:16:6.02:0,6,108	1/1:8,2:10:8.96:204,9,0	1/1:25,1:26:3.01:74,3,0	0/0:19,0:19:9.16:0,9,57	0/0:16,0:21:32.94:0,33,681	0/0:23,0:24:26.61:0,27,582	0/0:12,0:12:2.56:0,3,107	1/1:12,4:16:12.03:297,12,0	0/0:15,0:16:22.08:0,22,552	0/0:20,0:22:9.03:0,9,223	0/0:17,0:20:20.65:0,21,549	0/0:18,0:18:8.19:0,8,315	0/0:18,0:28:21.99:0,22,128	1/1:13,1:14:2.12:72,2,0	0/0:14,0:14:11.77:0,12,196	0/0:11,0:10:9.02:0,9,258	0/0:38,0:36:36.01:0,36,921	1/1:14,2:14:6.02:149,6,0	1/1:12,0:11:2.04:6,2,0	1/1:24,4:28:9.03:222,9,0	0/0:20,0:20:32.82:0,33,649	0/0:21,0:20:34.92:0,35,872	0/0:13,0:13:11.87:0,12,200	./.
chr10	58452361	.	T	TGGCTTCCA	1572.37	PASS	AC=20;AF=0.526;AN=38;BaseQRankSum=6.828;DP=395;FS=10.385;HRun=0;HaplotypeScore=99.4940;InbreedingCoeff=0.7538;MQ=84.90;MQ0=12;MQRankSum=-6.722;QD=22.15;ReadPosRankSum=-5.569;VQSLOD=-0.1483;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:3,3:3:3.01:133,3,0	1/1:3,0:1:3.01:58,3,0	0/0:21,0:21:57.17:0,57,1443	0/0:29,0:29:65.95:0,66,1676	1/1:5,3:3:6.02:111,6,0	0/0:29,0:29:81.26:0,81,2185	0/0:23,0:23:66.20:0,66,1726	./.	./.	1/1:7,2:7:18.01:436,18,0	1/1:2,2:4:9.03:234,9,0	0/0:43,0:43:79.46:0,79,3487	1/1:6,0:2:6.02:226,6,0	./.	1/1:9,0:4:3.01:63,3,0	./.	1/1:3,0:1:3.01:69,3,0	0/0:29,0:29:78.27:0,78,2234	./.	./.	./.	0/0:54,0:54:99:0,157,4368	0/0:37,0:37:33.43:0,33,2848	0/0:21,0:21:16.29:0,16,1571	1/1:7,2:5:3.01:114,3,0	1/1:5,1:4:9.03:284,9,0	./.	./.
chr10	58453853	.	A	ACATCCATC	8813.87	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=10.555;DP=946;FS=0.000;HRun=0;HaplotypeScore=272.6763;InbreedingCoeff=0.9409;MQ=54.42;MQ0=11;MQRankSum=-6.582;QD=15.36;ReadPosRankSum=-1.534;VQSLOD=2.7658;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:35:38.96:329,39,0	1/1:3,7:12:6.02:203,6,0	0/0:66,0:24:17.93:0,18,224	0/0:46,0:26:26.21:0,26,325	1/1:11,0:40:56.34:446,56,0	0/0:26,0:26:27.07:0,27,809	0/0:25,0:25:48.13:0,48,905	1/1:38,0:38:65.98:881,66,0	1/1:40,0:40:73.95:705,74,0	1/1:32,0:32:59.07:626,59,0	1/1:27,0:27:34.68:301,35,0	0/0:39,0:39:96.27:0,96,2027	1/1:33,0:33:58.10:610,58,0	1/1:34,0:34:70.29:728,70,0	1/1:40,0:40:59.99:636,60,0	0/0:9,0:40:4.82:0,5,800	1/1:10,12:26:8.75:346,9,0	0/0:45,0:45:67.31:0,67,1833	1/1:23,0:23:27.85:255,28,0	1/1:34,0:34:29.91:369,30,0	1/1:37,0:37:7.54:156,8,0	0/0:20,0:20:51.15:0,51,1045	0/0:24,0:24:51.13:0,51,996	0/0:41,0:40:70.88:0,71,1591	1/1:29,0:27:44.95:442,45,0	1/1:44,0:43:87.95:953,88,0	1/1:35,0:35:63.37:678,63,0	1/1:15,0:15:15.84:149,16,0
chr10	58453866	.	C	CATCC	4424.55	PASS	AB=0.985;AC=26;AF=0.464;AN=56;BaseQRankSum=2.715;DP=968;FS=3.411;HRun=0;HaplotypeScore=223.2071;InbreedingCoeff=0.2595;MQ=51.23;MQ0=16;MQRankSum=-0.720;QD=7.52;ReadPosRankSum=0.032;VQSLOD=3.8979;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:37,0:37:39.03:889,39,0	1/1:12,0:12:6.01:66,6,0	0/0:67,0:18:18.05:0,18,266	0/0:52,0:25:26.78:0,27,340	1/1:38,0:38:63.17:1365,63,0	0/0:27,0:27:39.39:0,39,641	0/0:23,0:23:48.13:0,48,724	1/1:49,0:49:7.31:55,7,0	1/1:38,0:38:1.48:247,1,0	1/1:37,0:37:10.99:195,11,0	0/1:25,0:25:14.98:88,0,15	0/0:37,0:37:96.30:0,96,1502	0/1:35,0:35:14.28:187,0,14	0/1:38,0:38:7.88:116,0,8	0/1:33,0:33:38.53:139,0,39	0/0:36,0:36:30.65:0,31,444	1/1:33,0:33:6.62:150,7,0	0/0:41,0:41:87.10:0,87,1332	0/1:25,0:25:1.20:103,0,1	1/1:30,0:30:7.09:151,7,0	0/1:34,6:41:4.43:75,0,4	0/0:25,0:25:51.16:0,51,796	0/0:27,0:27:51.15:0,51,776	0/0:43,0:43:76.23:0,76,1142	0/1:26,0:25:22.90:110,0,23	0/1:44,0:43:47.49:318,0,47	0/1:34,0:34:54.37:136,0,54	0/1:13,0:13:34.27:34,0,40
chr10	58454237	.	AGTCTGG	A	21800.17	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=17.591;DP=668;FS=2.092;HRun=0;HaplotypeScore=148.4179;InbreedingCoeff=0.9849;MQ=82.27;MQ0=0;MQRankSum=-18.400;QD=56.19;ReadPosRankSum=3.069;VQSLOD=4.8700;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:90.29:0,90,3012	1/1:0,10:10:30.10:708,30,0	0/0:26,0:26:75.24:0,75,2309	0/0:23,0:23:57.17:0,57,1771	0/0:30,0:30:90.31:0,90,3151	0/0:31,0:31:87.30:0,87,3037	0/0:21,0:21:63.20:0,63,2074	1/1:3,25:28:75.24:1645,75,0	1/1:0,23:23:54.19:1257,54,0	1/1:2,33:35:99:2234,99,0	1/1:1,23:24:60.21:1398,60,0	0/0:27,0:27:81.28:0,81,2773	1/1:2,20:22:60.21:1401,60,0	1/1:3,24:27:57.20:1330,57,0	1/1:1,26:27:69.24:1614,69,0	1/1:2,18:20:48.16:1133,48,0	1/1:4,14:18:30.10:690,30,0	0/0:23,0:23:63.20:0,63,2118	1/1:3,11:14:33.11:780,33,0	1/1:3,31:34:84.25:1849,84,0	1/1:3,12:15:33.11:708,33,0	0/0:21,0:21:60.21:0,60,2077	0/0:26,0:26:78.27:0,78,2701	0/0:19,0:19:54.19:0,54,1836	1/1:1,21:22:45.15:1029,45,0	1/1:1,30:31:87.26:1972,87,0	1/1:1,28:29:81.28:1913,81,0	1/1:1,8:9:6.02:140,6,0
chr10	58455074	.	ACTTC	A	2497.42	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=2.089;DP=782;FS=1.884;HRun=0;HaplotypeScore=150.3482;InbreedingCoeff=0.9837;MQ=94.41;MQ0=0;MQRankSum=-5.448;QD=37.27;ReadPosRankSum=4.649;VQSLOD=3.9029;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,46:47:99:1936,102,0	0/0:12,0:12:36.12:0,36,943	0/0:38,0:38:99:0,101,2531	0/0:33,0:33:84.69:0,85,2006	1/1:2,18:20:36.12:683,36,0	0/0:25,0:25:66.23:0,66,1770	0/0:33,0:33:96.33:0,96,2577	0/0:35,0:35:87.30:0,87,2338	0/0:24,0:24:72.25:0,72,1890	0/0:17,0:17:51.18:0,51,1297	0/0:11,0:11:27.09:0,27,701	0/0:35,0:35:99:0,99,2629	0/0:32,0:32:93.32:0,93,2407	0/0:33,0:33:99:0,99,2636	0/0:38,0:38:99:0,111,2924	0/0:28,0:28:84.29:0,84,2259	0/0:30,0:30:84.26:0,84,2120	0/0:25,0:25:72.19:0,72,1785	0/0:26,0:26:75.26:0,75,1966	0/0:18,0:18:51.18:0,51,1377	0/0:42,0:42:99:0,120,3096	0/0:27,0:27:81.26:0,81,2111	0/0:29,0:29:87.30:0,87,2307	0/0:21,0:21:63.18:0,63,1571	0/0:32,0:32:96.33:0,96,2561	0/0:23,0:23:66.23:0,66,1781	0/0:43,0:43:99:0,126,3391	0/0:5,0:5:12.04:0,12,324
chr10	58461131	.	T	TAC	1478.69	PASS	AB=0.882;AC=34;AF=0.654;AN=52;BaseQRankSum=-2.231;DP=671;FS=3.249;HRun=0;HaplotypeScore=121.9137;InbreedingCoeff=0.0262;MQ=51.94;MQ0=15;MQRankSum=-0.267;QD=2.76;ReadPosRankSum=0.024;VQSLOD=2.5590;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:41,0:41:7.48:31,7,0	0/0:9,0:8:0.47:0,0,1	./.	./.	1/1:17,0:15:2.99:24,3,0	1/1:10,16:29:17.58:233,18,0	0/1:24,11:35:99:229,0,131	1/1:30,0:28:10.57:71,11,0	0/1:15,0:15:11.41:50,0,11	1/1:29,0:28:0.07:53,0,0	1/1:22,0:22:3.01:40,3,0	0/1:18,8:26:34.59:35,0,57	0/1:26,0:26:1.85:32,0,2	0/1:28,0:27:16.90:42,0,17	0/0:28,0:28:0.24:0,0,1	0/0:12,0:28:23.06:0,23,123	1/1:28,0:28:5.38:35,5,0	0/1:11,8:19:54.27:78,0,54	0/0:13,0:12:4.47:0,4,37	1/1:6,0:8:3:26,3,0	0/1:36,0:33:0.08:0,0,0	1/1:11,13:26:9.03:136,9,0	1/1:9,6:16:9.03:136,9,0	0/1:10,19:29:45.44:205,0,45	1/1:21,0:20:5.99:50,6,0	0/1:25,0:24:3.07:44,0,3	1/1:23,0:22:7.64:63,8,0	0/1:4,0:4:0:0,0,0
chr10	58462423	.	A	AC	1109.28	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-4.503;DP=551;FS=5.287;HRun=7;HaplotypeScore=57.3666;InbreedingCoeff=0.9875;MQ=76.38;MQ0=0;MQRankSum=-0.466;QD=20.54;ReadPosRankSum=0.418;VQSLOD=3.1211;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,29:36:72.22:869,72,0	0/0:8,0:8:24.04:0,24,232	0/0:20,0:18:23.17:0,23,293	0/0:24,0:21:31.38:0,31,283	1/1:8,10:18:30.09:362,30,0	0/0:16,0:16:42.06:0,42,405	0/0:26,0:26:72.11:0,72,695	0/0:33,0:33:69.09:0,69,666	0/0:8,0:8:21.03:0,21,201	0/0:15,0:15:42.06:0,42,405	0/0:9,0:9:24.04:0,24,231	0/0:18,0:18:54.09:0,54,521	0/0:22,0:22:57.07:0,57,544	0/0:19,0:19:48.07:0,48,463	0/0:31,0:31:87.13:0,87,840	0/0:15,0:15:45.05:0,45,424	0/0:42,0:42:99:0,108,1041	0/0:33,0:33:99:0,99,949	0/0:22,0:22:51.08:0,51,492	0/0:12,0:12:30.04:0,30,289	0/0:23,0:23:63.10:0,63,606	0/0:9,0:9:18.02:0,18,173	0/0:13,0:13:36.05:0,36,347	0/0:17,0:17:48.08:0,48,463	0/0:18,0:17:54.07:0,54,515	0/0:15,0:15:45.07:0,45,434	0/0:20,0:20:54.08:0,54,520	0/0:9,0:9:21.03:0,21,203
chr10	58466608	.	GAAAGAAAAGA	G	7487.61	PASS	AB=1.000;AC=37;AF=0.685;AN=54;BaseQRankSum=-8.308;DP=705;FS=9.683;HRun=0;HaplotypeScore=222.6504;InbreedingCoeff=0.4358;MQ=65.71;MQ0=4;MQRankSum=-0.813;QD=13.94;ReadPosRankSum=-4.576;VQSLOD=1.7668;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:25:26.93:0,27,323	1/1:5,10:15:5.59:179,6,0	./.	0/0:38,0:18:3:0,3,28	0/0:13,0:36:65.86:0,66,575	0/1:17,0:17:99:260,0,101	0/0:15,0:15:11.21:0,11,53	1/1:25,0:19:8.97:74,9,0	1/1:7,15:22:6.02:145,6,0	1/1:14,27:41:77.77:1241,78,0	1/1:10,23:33:62.45:905,62,0	0/1:23,0:23:54.50:67,0,55	1/1:12,15:27:15.05:341,15,0	1/1:10,12:22:9.03:201,9,0	1/1:10,21:31:15:310,15,0	0/0:14,0:25:18.02:0,18,174	1/1:13,14:27:5.75:102,6,0	0/0:16,0:16:11.65:0,12,83	1/1:11,6:15:14.86:186,15,0	1/1:15,15:30:41.78:591,42,0	1/1:10,11:21:11.93:145,12,0	0/1:23,0:23:99:107,0,109	0/1:13,0:13:94.44:113,0,94	0/1:26,0:26:76.39:118,0,76	1/1:12,24:36:14.98:217,15,0	1/1:11,29:40:86.97:1343,87,0	1/1:20,22:42:24.08:665,24,0	1/1:2,4:6:6.02:177,6,0
chr10	58466632	.	GAAAAGAAAAGAAAA	G	2665.02	PASS	AB=0.952;AC=9;AF=0.161;AN=56;BaseQRankSum=12.343;DP=736;FS=1.599;HRun=0;HaplotypeScore=284.1145;InbreedingCoeff=0.4466;MQ=58.15;MQ0=16;MQRankSum=-8.167;QD=16.35;ReadPosRankSum=8.095;VQSLOD=0.9711;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:65.57:0,66,1430	0/0:15,0:15:17.57:0,18,283	0/0:29,0:9:20.74:0,21,239	0/0:60,0:16:30.34:0,30,345	0/0:34,0:33:99:0,99,2202	1/1:20,4:24:22.72:717,23,0	0/1:20,0:20:34.52:244,0,35	0/0:29,0:21:63.19:0,63,974	0/0:18,0:18:9.97:0,10,116	0/0:30,0:30:41.20:0,41,1094	0/0:28,0:28:48.10:0,48,1053	0/1:29,1:30:6:402,0,6	0/0:25,0:25:35.08:0,35,571	0/0:19,0:19:25.06:0,25,342	0/0:25,0:25:17:0,17,358	0/0:24,0:24:51.15:0,51,1012	0/0:22,0:22:22.03:0,22,364	0/1:20,0:20:31.28:172,0,31	0/0:19,0:15:40.57:0,41,619	0/0:26,0:26:60.24:0,60,1007	0/0:23,0:23:44.05:0,44,550	1/1:19,2:21:18.01:481,18,0	0/1:15,3:18:7.12:335,0,7	0/1:28,2:30:2.25:466,0,2	0/0:31,0:31:36.10:0,36,515	0/0:39,0:39:74:0,74,1511	0/0:39,0:38:40.03:0,40,744	0/0:8,0:8:9.37:0,9,166
chr10	58467147	.	AGAGACACCTGGG	A	1803.54	PASS	AB=0.928;AC=11;AF=0.196;AN=56;BaseQRankSum=7.967;DP=579;FS=2.616;HRun=0;HaplotypeScore=213.3698;InbreedingCoeff=-0.0870;MQ=68.02;MQ0=0;MQRankSum=-5.052;QD=9.59;ReadPosRankSum=2.600;VQSLOD=2.8057;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,117,6016	0/0:14,0:14:39.05:0,39,1690	0/0:23,0:20:34.16:0,34,1113	0/0:35,0:33:70.33:0,70,2068	0/0:17,0:17:51.08:0,51,2230	0/0:16,0:16:48.15:0,48,2461	0/0:21,0:21:63.20:0,63,3200	0/0:24,0:24:66.20:0,66,2361	0/0:19,0:19:8.36:0,8,63	0/1:20,0:20:99:105,0,439	0/0:20,0:20:14.92:0,15,155	0/0:34,0:34:96.25:0,96,4493	0/1:13,4:17:99:511,0,1281	0/1:26,0:26:91.70:92,0,151	0/1:14,5:19:99:247,0,956	0/0:13,0:13:39.12:0,39,1973	0/0:24,0:24:69.18:0,69,3321	0/0:17,0:17:51.16:0,51,2486	0/1:15,0:15:35.87:36,0,699	0/1:17,0:17:98.97:99,0,134	0/0:28,0:28:52.03:0,52,1093	0/0:17,0:17:48.15:0,48,2158	0/0:12,0:12:36.11:0,36,1660	0/0:15,0:15:45.14:0,45,2276	0/1:27,0:27:56.95:209,0,57	0/1:32,0:32:99:379,0,1058	0/1:4,2:6:99:209,0,267	1/1:9,0:9:3.01:64,3,0
chr10	58467149	.	AGACACCTGGGGGGACACCTGATCTGCAGG	A	6566.23	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=10.905;DP=572;FS=0.000;HRun=0;HaplotypeScore=363.7521;InbreedingCoeff=0.8801;MQ=65.70;MQ0=0;MQRankSum=-2.161;QD=25.75;ReadPosRankSum=-0.101;VQSLOD=2.4217;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,111,8237	0/0:12,0:12:30.09:0,30,2137	0/0:21,0:17:23.81:0,24,731	0/0:31,0:29:45.44:0,45,1764	0/0:18,0:18:42.14:0,42,2877	0/0:16,0:16:45.15:0,45,3791	0/0:22,0:22:60.17:0,60,3878	0/0:23,0:23:54.16:0,54,2486	1/1:2,16:18:3.48:101,3,0	1/1:7,13:20:39:748,39,0	1/1:4,16:20:3.01:99,3,0	0/0:34,0:34:78.22:0,78,5454	1/1:17,0:17:47.86:1201,48,0	1/1:5,21:26:3.01:223,3,0	1/1:19,0:19:29.76:662,30,0	0/0:15,0:15:36.12:0,36,2758	0/0:23,0:23:57.14:0,57,4502	0/0:17,0:17:48.11:0,48,3315	1/1:3,12:15:32.77:404,33,0	1/1:0,18:18:15.05:436,15,0	1/1:28,0:28:13.62:145,14,0	0/0:17,0:17:42.09:0,42,2663	0/0:12,0:12:33.11:0,33,2560	0/0:15,0:15:39.09:0,39,2740	1/1:3,24:27:6.02:443,6,0	1/1:3,29:32:75.40:1538,75,0	1/1:6,0:6:11.92:340,12,0	1/1:0,9:9:3.01:226,3,0
chr10	58467605	.	TC	T	1975.17	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.703;DP=691;FS=4.439;HRun=5;HaplotypeScore=66.2835;InbreedingCoeff=0.9032;MQ=74.95;MQ0=0;MQRankSum=-1.366;QD=26.34;ReadPosRankSum=2.324;VQSLOD=3.7096;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,49:52:99:1463,129,0	0/0:16,0:16:42.13:0,42,556	0/0:17,0:18:41.14:0,41,564	0/0:16,0:15:12.09:0,12,354	1/1:1,22:23:57.13:633,57,0	0/0:25,0:25:72.23:0,72,969	0/0:23,0:23:63.21:0,63,858	0/0:25,0:25:63.19:0,63,843	0/0:24,0:24:72.21:0,72,951	0/0:35,0:35:90.28:0,90,1202	0/0:18,0:18:45.14:0,45,600	0/0:27,0:27:75.23:0,75,1005	0/0:27,0:27:75.24:0,75,1008	0/0:26,0:26:69.21:0,69,913	0/0:28,0:28:78.23:0,78,1024	0/0:33,0:33:99:0,99,1335	0/0:40,0:40:99:0,114,1543	0/0:22,0:22:66.21:0,66,883	0/0:18,0:18:54.17:0,54,723	0/0:21,0:21:54.17:0,54,721	0/0:29,0:29:87.26:0,87,1158	0/0:24,0:24:66.20:0,66,878	0/0:21,0:21:57.18:0,57,764	0/0:25,0:25:75.22:0,75,993	0/0:18,0:18:54.16:0,54,710	0/0:26,0:26:72.19:0,72,911	0/0:28,0:28:81.26:0,81,1092	0/0:3,0:3:3.01:0,3,41
chr10	58468512	.	A	AT	23740.42	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-7.137;DP=768;FS=3.509;HRun=4;HaplotypeScore=78.2412;InbreedingCoeff=0.9835;MQ=85.62;MQ0=0;MQRankSum=-8.440;QD=34.26;ReadPosRankSum=3.824;VQSLOD=5.5257;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,54:56:99:2134,157,0	1/1:2,8:10:15.05:205,15,0	0/0:24,0:24:49.69:0,50,667	0/0:22,0:22:65.48:0,65,707	1/1:2,33:35:93.20:1227,93,0	1/1:1,19:20:51.17:697,51,0	1/1:2,31:33:75.25:1026,75,0	1/1:2,36:38:99:1412,108,0	1/1:2,28:30:75.25:1026,75,0	1/1:2,33:35:99:1305,99,0	1/1:2,21:23:54.17:724,54,0	1/1:0,23:23:63.21:861,63,0	1/1:1,21:22:45.15:616,45,0	1/1:2,27:29:60.20:821,60,0	1/1:5,19:24:51.17:698,51,0	0/0:29,0:29:81.23:0,81,919	1/1:2,30:32:87.29:1190,87,0	1/1:0,15:15:39.13:533,39,0	1/1:2,22:25:69.20:904,69,0	1/1:1,23:24:69.17:922,69,0	1/1:2,28:30:72.24:985,72,0	1/1:4,27:31:78.26:1065,78,0	1/1:4,23:27:63.19:827,63,0	1/1:2,26:28:78.26:1067,78,0	1/1:5,28:33:72.24:985,72,0	1/1:1,28:29:84.25:1117,84,0	1/1:1,35:37:90.30:1228,90,0	1/1:0,4:4:12.04:164,12,0
chr10	58470439	.	T	TA	1596.70	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-9.313;DP=640;FS=4.360;HRun=7;HaplotypeScore=59.1211;InbreedingCoeff=0.9068;MQ=62.60;MQ0=0;MQRankSum=0.871;QD=25.34;ReadPosRankSum=-1.886;VQSLOD=3.5747;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:66.09:0,66,630	1/1:1,11:12:30.09:361,30,0	0/0:3,0:3:6:0,6,58	0/0:3,0:3:3:0,3,29	0/0:44,0:44:99:0,126,1217	0/0:23,0:23:63.08:0,63,602	0/0:14,0:14:39.06:0,39,376	1/1:8,22:30:66.20:797,66,0	0/0:21,0:21:60.10:0,60,579	0/0:25,0:25:66.09:0,66,633	0/0:28,0:28:72.11:0,72,695	0/0:26,0:26:78.13:0,78,753	0/0:28,0:28:75.12:0,75,724	0/0:18,0:18:45.07:0,45,435	0/0:32,0:32:93.15:0,93,898	0/0:26,0:26:66.10:0,66,637	1/1:5,16:21:48.15:580,48,0	0/0:13,0:13:33.04:0,33,319	0/0:24,0:24:72.08:0,72,682	0/0:35,0:35:96.14:0,96,922	0/0:10,0:10:27.02:0,27,252	0/0:29,0:29:81.11:0,81,776	0/0:27,0:27:75.12:0,75,724	0/0:15,0:15:36.06:0,36,348	0/0:26,0:26:66.10:0,66,637	0/0:30,0:30:72.11:0,72,695	0/0:40,0:40:99:0,114,1100	0/0:12,0:12:33.05:0,33,319
chr10	58473881	.	GAGA	G	2933.66	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=11.787;DP=728;FS=0.000;HRun=0;HaplotypeScore=102.2022;InbreedingCoeff=0.9941;MQ=79.22;MQ0=0;MQRankSum=-1.253;QD=38.10;ReadPosRankSum=-1.391;VQSLOD=3.8831;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,129,2736	1/1:0,7:7:15.05:238,15,0	0/0:19,0:19:42.06:0,42,820	0/0:17,0:16:45.05:0,45,820	0/0:38,0:38:99:0,111,2385	0/0:31,0:31:87.30:0,87,1902	0/0:19,0:19:51.18:0,51,1101	1/1:5,34:39:99:1505,99,0	0/0:18,0:18:54.19:0,54,1165	0/0:26,0:26:69.23:0,69,1472	0/0:21,0:21:57.20:0,57,1232	0/0:27,0:27:75.26:0,75,1624	0/0:32,0:32:87.28:0,87,1832	0/0:19,0:19:48.16:0,48,994	0/0:41,0:41:99:0,123,2637	0/0:25,0:25:69.23:0,69,1469	1/1:2,29:31:84.29:1332,84,0	0/0:23,0:23:63.22:0,63,1377	0/0:20,0:20:57.19:0,57,1197	0/0:28,0:28:81.26:0,81,1729	0/0:29,0:29:87.30:0,87,1901	0/0:22,0:22:60.21:0,60,1297	0/0:30,0:30:90.29:0,90,1925	0/0:19,0:19:51.16:0,51,1060	0/0:31,0:31:87.29:0,87,1814	0/0:30,0:30:87.30:0,87,1903	0/0:30,0:30:84.29:0,84,1762	0/0:10,0:10:30.10:0,30,633
chr10	58474570	.	GGTGTGTGTGTGTGT	G	2338.60	PASS	AB=0.922;AC=13;AF=0.250;AN=52;BaseQRankSum=3.777;DP=748;FS=4.020;HRun=0;HaplotypeScore=278.8855;InbreedingCoeff=0.6031;MQ=60.30;MQ0=17;MQRankSum=-5.764;QD=9.78;ReadPosRankSum=-0.059;VQSLOD=1.7079;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:37,0:38:33.53:34,0,292	0/0:11,0:12:9.01:0,9,143	./.	0/0:36,0:25:0.47:0,0,1	0/0:22,0:24:11.96:0,12,146	1/1:15,11:25:15.05:505,15,0	1/1:14,14:28:15.05:565,15,0	0/0:42,0:41:36.12:0,36,958	0/0:24,0:34:42.08:0,42,937	0/0:24,0:29:29.08:0,29,592	0/0:10,0:14:3.01:0,3,62	1/1:24,11:34:24.08:893,24,0	0/0:25,0:29:42.14:0,42,936	0/0:32,0:34:25.64:0,26,583	0/1:31,0:42:2.93:3,0,796	0/0:28,0:33:39.42:0,39,1651	0/0:23,0:22:21.05:0,21,522	0/1:11,0:10:48.72:49,0,177	0/0:14,0:13:15.39:0,15,211	0/0:16,0:16:8.99:0,9,161	0/0:44,0:43:39.11:0,39,1080	1/1:17,6:23:8.99:247,9,0	./.	1/1:22,11:34:7.09:208,7,0	0/0:16,0:17:12.02:0,12,218	0/0:20,0:25:40.68:0,41,845	0/0:13,0:17:21.07:0,21,478	0/0:9,0:13:18.06:0,18,423
chr10	58475831	.	CA	C	3689.31	PASS	AB=0.543;AC=25;AF=0.446;AN=56;BaseQRankSum=13.033;DP=578;FS=3.893;HRun=10;HaplotypeScore=71.5615;InbreedingCoeff=0.9026;MQ=66.48;MQ0=0;MQRankSum=1.256;QD=13.66;ReadPosRankSum=0.515;VQSLOD=3.8489;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,0:19:32.59:96,33,0	1/1:0,0:5:8.15:24,8,0	0/0:14,0:12:11.99:0,12,117	0/0:13,0:12:4.75:0,5,143	1/1:2,0:31:48.88:144,49,0	1/1:0,22:22:59.99:521,60,0	1/1:2,16:18:44.99:391,45,0	1/1:5,0:38:65.18:191,65,0	0/0:22,0:22:63.16:0,63,689	0/0:23,0:23:60.16:0,60,657	0/0:20,0:21:56.99:0,57,611	1/1:1,20:21:50.99:443,51,0	0/0:25,0:25:69.16:0,69,746	0/0:11,0:11:30.07:0,30,325	0/0:18,0:18:48.13:0,48,531	0/1:4,21:25:9.37:386,0,9	1/1:0,0:16:32.59:96,33,0	1/1:4,12:16:29.99:260,30,0	0/0:23,0:25:58.64:0,59,597	0/0:29,1:30:58.14:0,58,856	0/0:11,0:12:26.91:0,27,280	1/1:4,20:24:26.81:462,27,0	1/1:2,16:18:35.95:312,36,0	1/1:1,16:17:41.99:364,42,0	0/0:19,1:20:25.08:0,25,505	0/0:27,0:27:75.15:0,75,809	0/0:32,0:32:90.23:0,90,986	0/0:15,0:15:36.10:0,36,397
chr10	58476109	.	C	CA	2628.75	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-11.480;DP=747;FS=0.000;HRun=2;HaplotypeScore=71.9148;InbreedingCoeff=0.9943;MQ=90.39;MQ0=0;MQRankSum=-1.765;QD=35.05;ReadPosRankSum=-2.685;VQSLOD=2.9295;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,132,1607	1/1:1,5:6:15.05:216,15,0	0/0:32,0:32:86.92:0,87,971	0/0:33,0:34:79.46:0,79,951	0/0:22,0:22:57.17:0,57,693	0/0:23,0:23:63.20:0,63,777	0/0:22,0:22:63.18:0,63,766	1/1:6,40:46:99:1646,117,0	0/0:25,0:25:75.24:0,75,930	0/0:20,0:20:51.16:0,51,632	0/0:26,0:26:78.25:0,78,965	0/0:31,0:31:90.28:0,90,1116	0/0:32,0:32:93.29:0,93,1153	0/0:30,0:30:87.25:0,87,1063	0/0:35,0:35:99:0,105,1302	0/0:34,0:34:99:0,99,1203	1/1:1,22:23:63.21:907,63,0	0/0:20,0:20:60.11:0,60,710	0/0:28,0:28:78.23:0,78,953	0/0:22,0:22:63.20:0,63,781	0/0:37,0:37:99:0,102,1264	0/0:24,0:24:69.21:0,69,844	0/0:21,0:21:63.19:0,63,768	0/0:33,0:33:87.27:0,87,1078	0/0:16,0:16:48.15:0,48,595	0/0:18,0:18:48.15:0,48,595	0/0:30,0:30:90.28:0,90,1115	0/0:12,0:12:36.11:0,36,446
chr10	58476383	.	CT	C	2609.94	PASS	AB=0.799;AC=25;AF=0.446;AN=56;BaseQRankSum=5.912;DP=606;FS=11.495;HRun=14;HaplotypeScore=70.4337;InbreedingCoeff=0.4302;MQ=70.53;MQ0=0;MQRankSum=1.159;QD=7.70;ReadPosRankSum=1.499;VQSLOD=1.6010;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,20:23:55.57:376,56,0	0/1:5,6:11:7.09:102,0,7	0/1:19,1:16:9.99:10,0,78	0/1:10,0:8:4.85:5,0,40	1/1:11,13:26:17.66:247,18,0	1/1:10,18:28:0.77:294,1,0	1/1:5,12:17:7.84:198,8,0	0/1:19,16:35:27.74:235,0,28	0/0:13,0:13:27.01:0,27,243	0/0:20,2:22:18.43:0,18,306	0/0:19,1:21:28.51:0,29,372	1/1:9,13:23:14.49:191,14,0	0/0:22,1:23:33.36:0,33,425	0/0:17,2:19:18.42:0,18,300	0/0:22,1:24:27.77:0,28,515	0/0:8,0:22:35.94:0,36,190	1/1:7,19:28:51.63:341,52,0	1/1:4,8:13:3.53:110,4,0	0/0:11,1:13:6.25:0,6,179	0/1:24,4:30:28.19:28,0,292	0/1:6,2:8:40.67:41,0,84	0/1:11,12:27:19.74:135,0,20	1/1:4,15:19:7.82:198,8,0	1/1:4,16:21:43.64:294,44,0	0/0:24,2:27:45.32:0,45,548	0/0:23,0:26:54.65:0,55,469	0/0:37,0:37:88.55:0,89,786	0/0:18,1:20:24.08:0,24,330
chr10	58476891	.	T	TACACACACAC	2078.94	PASS	AB=0.810;AC=15;AF=0.278;AN=54;BaseQRankSum=3.780;DP=669;FS=24.597;HRun=0;HaplotypeScore=189.4381;InbreedingCoeff=0.3348;MQ=58.05;MQ0=12;MQRankSum=0.292;QD=8.15;ReadPosRankSum=-5.202;VQSLOD=-0.4962;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:34,0:33:30.31:30,0,163	1/1:0,0:8:5.60:26,6,0	0/0:23,0:11:23.87:0,24,622	0/1:15,0:9:50.64:51,0,191	0/1:30,0:29:34.07:34,0,172	0/0:6,18:29:1.36:0,1,3	1/1:25,0:25:16.79:224,17,0	0/1:28,0:28:99:311,0,123	0/0:19,0:19:26.99:0,27,693	0/0:24,0:24:28.86:0,29,1292	0/0:20,0:20:42.62:0,43,1332	1/1:28,0:27:39.93:1237,40,0	0/0:30,0:30:63.19:0,63,1540	0/0:21,0:21:42.13:0,42,1153	0/0:30,0:28:60.20:0,60,1817	./.	0/1:3,0:19:6.89:7,0,15	0/1:3,5:8:34.21:234,0,34	0/0:20,0:19:20.83:0,21,970	0/0:28,0:27:54.18:0,54,1639	0/0:33,0:33:32.37:0,32,1865	0/1:4,27:37:0:0,0,0	0/0:5,20:27:0.96:0,1,3	1/1:2,14:21:3.01:85,3,0	0/0:18,0:18:34.48:0,34,1325	0/0:24,0:24:40.19:0,40,1545	0/0:27,0:26:57.54:0,58,1556	0/0:7,0:7:9.65:0,10,174
chr10	58476897	.	C	CAG	356.92	PASS	AB=0.971;AC=20;AF=0.417;AN=48;BaseQRankSum=2.892;DP=663;FS=20.379;HRun=0;HaplotypeScore=124.6477;InbreedingCoeff=0.3179;MQ=54.61;MQ0=14;MQRankSum=0.744;QD=1.19;ReadPosRankSum=1.163;VQSLOD=1.1271;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:32:8.17:0,8,57	1/1:9,0:9:4.70:15,5,0	./.	./.	1/1:32,0:31:5.96:44,6,0	0/0:26,0:26:0.47:0,0,1	0/0:28,0:28:2.95:0,3,24	./.	1/1:19,0:19:3:25,3,0	0/0:22,0:22:9.87:0,10,76	0/1:18,0:18:0:0,0,0	1/1:25,0:24:5.57:58,6,0	1/1:24,8:33:8.99:87,9,0	0/1:19,0:23:18.20:20,0,18	0/1:30,0:28:37.56:38,0,53	0/0:31,0:31:2.99:0,3,24	0/1:18,0:18:15.49:26,0,15	1/1:7,0:6:5.56:29,6,0	0/0:22,0:22:9.97:0,10,83	0/0:25,0:24:2.86:0,3,24	0/0:32,0:32:17.17:0,17,138	0/1:34,0:34:13.35:27,0,13	0/1:30,0:30:0:0,0,1	./.	1/1:21,0:21:12.01:135,12,0	0/0:26,0:26:10.20:0,10,112	0/0:29,0:28:24.31:0,24,227	0/0:6,0:6:3:0,3,32
chr10	58476913	.	G	GAGAG	536.65	PASS	AB=1.000;AC=19;AF=0.380;AN=50;BaseQRankSum=-1.125;DP=623;FS=34.753;HRun=0;HaplotypeScore=115.2243;InbreedingCoeff=0.3785;MQ=50.35;MQ0=19;MQRankSum=-1.582;QD=2.47;ReadPosRankSum=0.246;VQSLOD=0.5698;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:30:8.54:0,9,121	1/1:7,0:7:6.01:60,6,0	./.	./.	1/1:30,0:29:5.63:43,6,0	0/0:23,0:23:0.42:0,0,1	0/0:22,0:22:2.54:0,3,43	1/1:17,0:16:2.13:5,2,0	1/1:15,4:20:3.01:69,3,0	0/0:22,0:22:11.23:0,11,146	0/0:21,0:21:0.47:0,0,1	1/1:27,0:26:4.93:73,5,0	1/1:24,0:24:6.91:143,7,0	0/1:22,0:21:18.94:64,0,19	0/1:26,0:25:5.91:6,0,81	0/0:35,0:35:3:0,3,25	0/1:17,0:17:22.77:23,0,39	1/1:8,0:7:8.88:66,9,0	0/0:18,0:17:8.94:0,9,155	0/0:24,0:23:2.96:0,3,44	0/0:39,0:39:17.95:0,18,229	0/0:32,0:32:3.22:0,3,44	0/0:26,0:25:0.42:0,0,1	./.	1/1:19,0:19:9.49:134,9,0	0/0:25,0:25:6.84:0,7,156	0/0:28,0:27:24:0,24,318	0/0:7,0:7:3:0,3,46
chr10	58477060	.	A	ATGTCTGTCTGTCTGTC	5394.64	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=0.558;DP=831;FS=12.746;HRun=0;HaplotypeScore=347.3255;InbreedingCoeff=0.9862;MQ=71.22;MQ0=0;MQRankSum=-6.766;QD=54.49;ReadPosRankSum=-4.791;VQSLOD=2.3458;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,99,3793	1/1:10,13:25:30.06:1978,30,0	0/0:23,0:21:22.63:0,23,806	0/0:31,0:31:23.97:0,24,1030	0/0:29,0:29:51.13:0,51,1757	0/0:33,0:33:54.17:0,54,2143	0/0:33,0:33:63.20:0,63,2347	1/1:51,0:49:78.23:2724,78,0	0/0:31,0:31:72.23:0,72,2772	0/0:27,0:27:54.18:0,54,1986	0/0:15,0:15:33.11:0,33,1225	0/0:29,0:29:57.20:0,57,2401	0/0:36,0:36:87.26:0,87,3155	0/0:38,0:38:84.23:0,84,2933	0/0:34,0:34:72.23:0,72,2769	0/0:40,0:39:93.29:0,93,3635	1/1:16,5:23:12.04:692,12,0	0/0:9,0:9:24.08:0,24,976	0/0:24,0:24:54.17:0,54,1786	0/0:26,0:26:48.11:0,48,1910	0/0:42,0:42:78.20:0,78,2768	0/0:30,0:30:66.18:0,66,2338	0/0:27,0:27:66.23:0,66,2791	0/0:30,0:30:75.22:0,75,2824	0/0:29,0:29:51.15:0,51,1935	0/0:29,0:29:72.23:0,72,2819	0/0:27,0:27:69.24:0,69,2860	0/0:20,0:19:45.15:0,45,1780
chr10	58479436	.	GAGAGAGAGAC	G	401.85	PASS	AB=0.967;AC=11;AF=0.196;AN=56;BaseQRankSum=5.506;DP=243;FS=11.639;HRun=0;HaplotypeScore=67.7945;InbreedingCoeff=-0.2354;MQ=65.95;MQ0=11;MQRankSum=-3.585;QD=3.27;ReadPosRankSum=-0.143;VQSLOD=0.2464;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:16,0:15:29.31:29,0,105	0/0:1,0:1:3.01:0,3,51	0/0:16,0:7:2.01:0,2,59	0/1:31,0:13:7.38:7,0,29	0/0:7,0:7:14.90:0,15,111	0/0:5,0:5:11.97:0,12,96	0/0:6,0:5:8.97:0,9,71	0/0:13,0:12:26.72:0,27,208	0/1:10,0:10:2.32:2,0,64	0/0:4,0:1:2.94:0,3,18	0/0:2,0:2:2.99:0,3,24	0/1:10,0:10:39.41:73,0,39	0/0:5,0:4:11.95:0,12,91	0/0:9,0:9:2.76:0,3,112	0/1:8,0:8:52.92:247,0,53	0/1:7,0:7:36.16:36,0,89	0/0:7,0:7:17.88:0,18,260	0/0:5,0:4:8.91:0,9,62	0/0:9,0:8:4.32:0,4,102	0/1:7,1:8:5.76:6,0,62	0/0:13,0:10:17.94:0,18,141	0/1:6,0:6:40.73:41,0,55	0/0:7,0:7:14.79:0,15,102	0/1:3,0:3:0:0,0,0	0/1:8,4:12:38.96:46,0,39	0/0:7,0:7:16.42:0,16,96	0/1:12,0:12:43.37:43,0,154	0/0:4,0:2:3.01:0,3,43
chr10	58479446	.	CAGAGAGAGAG	C	841.83	PASS	AB=0.706;AC=21;AF=0.553;AN=38;BaseQRankSum=2.989;DP=256;FS=13.955;HRun=0;HaplotypeScore=70.5449;InbreedingCoeff=0.2987;MQ=57.63;MQ0=11;MQRankSum=-0.244;QD=7.58;ReadPosRankSum=3.476;VQSLOD=0.3801;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:12,0:17:3.01:67,3,0	0/0:2,0:2:3.01:0,3,63	./.	./.	0/0:6,0:6:0:0,0,0	./.	./.	0/0:14,0:14:7.73:0,8,44	1/1:7,0:10:2.81:22,3,0	1/1:5,0:2:3:25,3,0	./.	1/1:6,0:11:6.49:118,6,0	./.	1/1:10,0:9:3.01:42,3,0	0/1:7,4:12:5.91:352,0,6	1/1:5,0:7:3.01:70,3,0	0/0:10,0:10:5.30:0,5,155	./.	0/0:11,0:10:2.03:0,2,5	0/0:6,1:7:0:0,0,1	0/0:15,0:12:2.99:0,3,23	1/1:5,0:6:3.01:70,3,0	./.	./.	1/1:10,0:10:3.01:39,3,0	1/1:9,0:9:2.21:62,2,0	1/1:10,3:13:3.26:88,3,0	0/0:4,0:2:1.24:0,1,35
chr10	58483492	.	GGAGAGAGAGAGAGAGAGAGAGA	G	1278.69	PASS	AB=0.868;AC=12;AF=0.231;AN=52;BaseQRankSum=3.810;DP=586;FS=16.915;HRun=0;HaplotypeScore=284.6921;InbreedingCoeff=0.6135;MQ=64.01;MQ0=17;MQRankSum=-2.072;QD=9.33;ReadPosRankSum=1.882;VQSLOD=0.5319;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:31.93:0,32,2115	0/0:11,0:11:6.02:0,6,542	./.	./.	0/0:17,0:17:21.07:0,21,1204	1/1:29,0:29:9.01:236,9,0	0/1:12,0:12:57.17:57,0,87	0/0:42,0:41:42.13:0,42,1252	0/0:14,0:13:21.05:0,21,1337	0/0:28,0:28:48.14:0,48,2431	0/0:16,0:16:15.05:0,15,897	1/1:18,5:23:12.04:636,12,0	0/0:30,0:30:48.16:0,48,2636	0/0:18,0:17:21.07:0,21,1560	0/0:21,0:21:12.51:0,13,886	0/0:23,0:23:24.08:0,24,1656	0/0:22,0:22:27.55:0,28,1742	0/1:9,0:13:18.39:146,0,18	0/0:18,0:18:26.44:0,26,1037	0/0:18,0:17:12.04:0,12,696	0/0:27,0:26:27.55:0,28,1928	1/1:19,0:19:3.47:150,3,0	1/1:19,1:20:3:173,3,0	1/1:20,0:20:5.48:33,5,0	0/0:19,0:17:15.05:0,15,932	0/0:17,0:15:22.88:0,23,978	0/0:19,0:19:33.11:0,33,2404	0/0:12,0:12:21.07:0,21,1082
chr10	58487097	.	C	CT	2782.44	PASS	AB=0.683;AC=22;AF=0.393;AN=56;BaseQRankSum=-5.565;DP=646;FS=13.608;HRun=13;HaplotypeScore=82.2781;InbreedingCoeff=0.4464;MQ=69.90;MQ0=2;MQRankSum=2.603;QD=8.51;ReadPosRankSum=-0.747;VQSLOD=0.9531;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:17,1:21:2.63:0,3,147	0/0:10,0:11:20.70:0,21,140	0/0:22,0:17:2.21:0,2,92	0/0:24,0:17:15.13:0,15,72	0/0:28,1:31:29.38:0,29,330	0/0:18,0:22:49.04:0,49,308	0/0:23,1:25:15.70:0,16,243	0/0:30,0:32:29.87:0,30,185	1/1:7,15:22:5.46:176,5,0	1/1:5,17:23:38.86:339,39,0	1/1:9,16:27:2.59:187,3,0	0/1:17,0:20:1.67:2,0,111	0/1:8,12:20:5.07:235,0,5	1/1:5,11:16:15.02:139,15,0	1/1:6,17:23:3.44:174,3,0	0/0:20,0:20:41.55:0,42,288	0/0:20,0:20:42.06:0,42,288	0/0:14,1:16:9.57:0,10,192	0/1:15,21:38:9.09:455,0,9	0/1:11,22:33:18.57:349,0,19	1/1:5,12:17:3.44:174,3,0	0/0:14,0:14:17.40:0,17,122	0/0:33,0:35:37.12:0,37,353	0/0:23,0:25:53.57:0,54,346	1/1:10,14:24:20.99:185,21,0	0/1:12,12:25:16.65:204,0,17	1/1:8,23:31:34.34:330,34,0	0/1:2,5:7:18.69:19,0,32
chr10	58493373	.	A	AT	5894.16	PASS	AB=0.733;AC=25;AF=0.446;AN=56;BaseQRankSum=-14.271;DP=562;FS=5.424;HRun=10;HaplotypeScore=70.0343;InbreedingCoeff=0.8636;MQ=81.24;MQ0=0;MQRankSum=-1.658;QD=20.61;ReadPosRankSum=1.241;VQSLOD=5.9250;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:28:70.94:0,71,572	0/0:7,0:7:17.97:0,18,148	0/1:20,0:19:0.62:1,0,147	0/0:20,1:20:21.73:0,22,226	0/0:18,0:19:43.97:0,44,351	0/0:3,0:14:23.36:0,23,83	0/0:3,0:25:40.74:0,41,118	0/0:31,0:31:65.89:0,66,542	1/1:4,17:21:39.10:416,39,0	1/1:10,20:30:54.11:566,54,0	1/1:2,22:24:38.51:608,39,0	0/0:0,0:15:26.48:0,26,76	1/1:1,13:15:41.94:430,42,0	1/1:3,14:17:30.07:320,30,0	1/1:5,23:28:63.16:672,63,0	0/0:18,0:18:50.93:0,51,416	0/0:25,2:27:16.91:0,17,547	0/0:1,0:14:26.48:0,26,76	0/1:9,12:22:3.18:346,0,3	0/1:5,14:20:1.38:370,0,1	1/1:3,13:16:14.12:338,14,0	0/0:3,0:19:35.58:0,36,119	0/0:3,0:18:31.51:0,32,107	0/0:0,0:20:38.70:0,39,112	1/1:1,20:21:54.14:576,54,0	1/1:3,17:21:53.97:558,54,0	1/1:7,15:22:20.47:423,20,0	1/1:0,8:9:26.90:270,27,0
chr10	58494501	.	A	AATT	10419.86	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-8.475;DP=716;FS=4.436;HRun=0;HaplotypeScore=94.0494;InbreedingCoeff=0.9998;MQ=86.17;MQ0=1;MQRankSum=-4.831;QD=60.23;ReadPosRankSum=0.880;VQSLOD=6.7560;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,123,2049	0/0:13,0:13:39.13:0,39,644	0/0:30,0:30:72.25:0,72,1189	0/0:22,0:22:57.16:0,57,897	0/0:29,0:29:66.21:0,66,1074	1/1:1,25:26:69.24:1555,69,0	1/1:2,18:23:57.20:1285,57,0	0/0:40,0:40:99:0,114,1805	0/0:23,0:23:66.21:0,66,1072	0/0:22,0:22:66.23:0,66,1094	0/0:19,0:19:57.19:0,57,949	1/1:0,21:23:63.22:1419,63,0	0/0:19,0:19:54.17:0,54,875	0/0:26,0:26:72.25:0,72,1199	0/0:38,0:38:99:0,111,1823	0/0:29,0:29:84.26:0,84,1339	0/0:31,0:31:90.27:0,90,1447	1/1:1,14:15:45.15:1019,45,0	0/0:18,0:18:51.16:0,51,824	0/0:32,0:32:84.29:0,84,1400	0/0:17,0:17:51.17:0,51,850	1/1:6,25:31:84.27:1816,84,0	1/1:3,29:33:90.31:2004,90,0	1/1:2,19:21:60.21:1321,60,0	0/0:13,0:13:36.12:0,36,600	0/0:29,0:29:81.28:0,81,1350	0/0:41,0:41:99:0,114,1854	0/0:10,0:10:27.09:0,27,449
chr10	58496387	.	GT	G	1442.14	PASS	AB=0.753;AC=8;AF=0.143;AN=56;BaseQRankSum=0.301;DP=609;FS=3.421;HRun=11;HaplotypeScore=90.7322;InbreedingCoeff=0.6523;MQ=74.50;MQ0=2;MQRankSum=1.205;QD=12.33;ReadPosRankSum=0.099;VQSLOD=3.6423;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:25:34.37:0,34,187	0/1:2,10:12:28.38:145,0,28	0/1:23,1:22:26.01:26,0,126	0/0:14,0:13:15.28:0,15,127	0/0:4,0:44:99:0,109,575	0/0:3,0:23:36.93:0,37,185	0/0:1,0:6:8.65:0,9,48	1/1:13,23:37:56.52:551,57,0	0/0:10,1:11:8.44:0,8,295	0/0:35,1:38:74.26:0,74,953	0/0:25,0:28:71.87:0,72,725	0/0:4,0:18:41.71:0,42,210	0/0:23,0:24:35.25:0,35,528	0/0:18,0:18:45.11:0,45,474	0/0:19,0:19:54.14:0,54,576	1/1:2,17:19:18.96:362,19,0	1/1:3,22:25:36.94:510,37,0	0/0:5,0:20:40.04:0,40,214	0/0:15,0:17:41.81:0,42,413	0/0:25,2:27:50.53:0,51,734	0/0:8,0:10:23.69:0,24,208	0/0:2,0:21:43.25:0,43,240	0/0:4,0:21:40.02:0,40,210	0/0:0,0:4:5.65:0,6,28	0/0:28,0:28:74.87:0,75,747	0/0:31,0:33:80.84:0,81,812	0/0:29,1:30:53.27:0,53,730	0/0:12,0:12:33.08:0,33,352
chr10	58507304	.	T	TTG	4927.20	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-12.144;DP=660;FS=2.987;HRun=0;HaplotypeScore=78.4615;InbreedingCoeff=0.9993;MQ=67.78;MQ0=0;MQRankSum=0.315;QD=34.94;ReadPosRankSum=3.289;VQSLOD=7.3791;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:69.22:0,69,882	0/0:14,0:14:39.11:0,39,492	0/0:22,0:19:23.90:0,24,508	0/0:15,0:15:32.66:0,33,371	0/0:43,0:43:99:0,120,1560	1/1:3,19:22:54.18:918,54,0	1/1:2,15:17:30.10:503,30,0	0/0:23,0:23:54.17:0,54,689	0/0:21,0:21:57.18:0,57,740	0/0:34,0:34:99:0,99,1276	0/0:28,0:28:78.23:0,78,993	1/1:4,14:19:39.13:646,39,0	0/0:21,0:21:60.19:0,60,776	0/0:24,0:24:69.22:0,69,896	0/0:29,0:29:84.26:0,84,1073	0/0:23,0:23:60.19:0,60,777	0/0:14,0:14:31.98:0,32,393	1/1:4,17:22:45.14:716,45,0	0/0:18,0:18:45.15:0,45,585	0/0:35,0:35:96.29:0,96,1221	0/0:14,0:14:39.09:0,39,476	1/1:4,17:21:45.15:766,45,0	1/1:4,20:24:44.99:765,45,0	1/1:2,14:16:36.12:612,36,0	0/0:19,0:19:48.14:0,48,610	0/0:40,0:40:99:0,111,1431	0/0:31,0:31:84.23:0,84,1049	0/0:23,0:23:66.13:0,66,808
chr10	58507669	.	TTTTTG	T	1374.62	PASS	AB=0.619;AC=3;AF=0.054;AN=56;BaseQRankSum=0.261;DP=614;FS=0.000;HRun=0;HaplotypeScore=144.7374;InbreedingCoeff=0.6404;MQ=72.73;MQ0=2;MQRankSum=-0.624;QD=22.91;ReadPosRankSum=-0.718;VQSLOD=3.1124;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:10,16:26:15.72:348,0,16	0/0:17,0:17:39.13:0,39,1060	0/0:25,0:15:11.83:0,12,209	0/0:25,0:22:28.78:0,29,553	1/1:7,27:34:72.88:1133,73,0	0/0:31,0:31:72.23:0,72,1852	0/0:19,0:19:48.16:0,48,1215	0/0:32,0:32:75.25:0,75,1902	0/0:18,0:18:39.08:0,39,399	0/0:21,0:21:37.95:0,38,406	0/0:20,0:20:45.07:0,45,552	0/0:17,0:17:36.12:0,36,969	0/0:21,0:21:51.07:0,51,551	0/0:17,0:17:41.14:0,41,278	0/0:18,0:18:45.06:0,45,456	0/0:14,0:14:30.09:0,30,646	0/0:24,0:24:43.35:0,43,1385	0/0:14,0:14:34.93:0,35,929	0/0:19,0:18:35.95:0,36,356	0/0:35,0:35:79.14:0,79,878	0/0:12,0:12:32.95:0,33,349	0/0:21,0:21:57.17:0,57,1551	0/0:22,0:22:54.15:0,54,1418	0/0:22,0:22:54.66:0,55,1526	0/0:23,0:23:42.08:0,42,426	0/0:32,0:32:37.01:0,37,592	0/0:25,0:25:41.62:0,42,412	0/0:10,0:10:18.05:0,18,239
chr10	58507672	.	TTG	T	3831.37	PASS	AB=1.000;AC=26;AF=0.464;AN=56;BaseQRankSum=13.853;DP=606;FS=15.581;HRun=0;HaplotypeScore=100.1652;InbreedingCoeff=0.7251;MQ=71.61;MQ0=2;MQRankSum=-0.285;QD=11.86;ReadPosRankSum=-0.454;VQSLOD=2.0291;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:25:99:105,0,206	0/0:17,0:17:51.17:0,51,796	0/0:26,0:16:30.85:0,31,347	0/0:25,1:23:43.09:0,43,544	0/1:31,0:31:46.11:390,0,46	0/0:31,0:31:90.29:0,90,1383	0/0:20,0:20:60.02:0,60,853	0/0:31,0:31:88.47:0,88,1273	1/1:17,0:17:42.73:217,43,0	1/1:17,1:18:32.60:276,33,0	0/1:19,0:19:5.30:161,0,5	0/0:14,0:14:38.14:0,38,577	1/1:22,0:22:12.89:208,13,0	1/1:13,4:17:34.05:511,34,0	1/1:18,0:18:38.41:213,38,0	0/0:13,0:13:33.25:0,33,504	0/0:25,0:25:42.81:0,43,896	0/0:16,0:16:45.55:0,46,644	1/1:19,0:18:38.66:248,39,0	1/1:36,1:37:53.76:428,54,0	1/1:12,1:13:13.42:172,13,0	0/0:21,0:21:60.18:0,60,982	0/0:20,0:20:60.07:0,60,905	0/0:23,0:23:63.13:0,63,950	1/1:24,0:24:39.17:176,39,0	1/1:32,0:32:82.63:466,83,0	1/1:21,0:21:41.68:229,42,0	0/1:10,0:10:14.39:33,0,14
chr10	58507673	.	TG	T	8357.38	PASS	AB=1.000;AC=28;AF=0.500;AN=56;BaseQRankSum=10.796;DP=604;FS=13.411;HRun=1;HaplotypeScore=72.8265;InbreedingCoeff=0.8326;MQ=71.06;MQ0=2;MQRankSum=0.466;QD=26.04;ReadPosRankSum=-0.377;VQSLOD=3.3314;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:25:69.99:70,0,197	0/0:17,0:17:51.16:0,51,656	0/0:26,0:16:15.82:0,16,278	0/0:26,0:23:43.06:0,43,458	0/1:30,0:30:51.37:286,0,51	0/0:31,0:31:90.26:0,90,1128	0/0:21,0:21:62.99:0,63,714	0/0:31,0:31:93.06:0,93,1079	1/1:4,14:18:51.10:640,51,0	1/1:10,7:17:44.63:530,45,0	1/1:6,12:18:42.08:533,42,0	0/0:14,0:14:38.12:0,38,465	1/1:13,10:23:59.94:651,60,0	1/1:10,6:16:44.79:395,45,0	1/1:2,16:18:54.04:677,54,0	0/0:13,0:13:5.30:0,5,388	0/0:23,1:24:20.07:0,20,712	0/0:16,0:16:47.95:0,48,553	1/1:9,10:18:54.11:660,54,0	1/1:22,15:37:96.35:1072,96,0	1/1:5,8:13:30.85:420,31,0	0/0:22,0:22:63.16:0,63,797	0/0:20,0:20:60.06:0,60,723	0/0:22,0:22:62.87:0,63,746	1/1:0,24:24:42.14:584,42,0	1/1:0,32:32:93.91:1092,94,0	1/1:0,21:21:45.53:582,46,0	1/1:2,8:10:10.66:164,11,0
chr10	58508385	.	AC	A	4834.27	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=15.674;DP=651;FS=0.000;HRun=3;HaplotypeScore=93.6703;InbreedingCoeff=0.9940;MQ=83.17;MQ0=0;MQRankSum=-1.637;QD=33.81;ReadPosRankSum=2.091;VQSLOD=5.0723;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,117,1646	0/0:8,0:8:24.08:0,24,346	0/0:19,0:19:42.13:0,42,570	0/0:24,0:24:63.17:0,63,831	0/0:26,0:26:75.24:0,75,1061	1/1:0,26:26:75.24:930,75,0	1/1:1,19:20:48.15:595,48,0	0/0:35,0:35:93.29:0,93,1291	0/0:16,0:16:45.14:0,45,632	0/0:34,0:34:99:0,99,1411	0/0:22,0:22:66.21:0,66,933	1/1:1,24:25:69.22:855,69,0	0/0:27,0:27:81.27:0,81,1164	0/0:23,0:23:66.21:0,66,929	0/0:25,0:25:69.23:0,69,994	0/0:21,0:21:57.18:0,57,804	0/0:20,0:20:57.19:0,57,819	1/1:1,4:5:12.04:149,12,0	0/0:17,0:17:51.16:0,51,717	0/0:26,0:26:75.24:0,75,1063	0/0:36,0:36:99:0,108,1537	1/1:0,20:20:60.19:744,60,0	1/1:0,21:21:54.17:669,54,0	1/1:1,25:26:72.23:893,72,0	0/0:19,0:19:54.18:0,54,777	0/0:27,0:27:81.27:0,81,1166	0/0:31,0:31:90.24:0,90,1234	0/0:12,0:12:36.12:0,36,518
chr10	58509383	.	TC	T	5998.15	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=9.574;DP=699;FS=4.586;HRun=2;HaplotypeScore=77.3855;InbreedingCoeff=0.9992;MQ=85.16;MQ0=0;MQRankSum=-6.764;QD=37.03;ReadPosRankSum=2.240;VQSLOD=5.6285;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,111,1769	0/0:7,0:7:21.07:0,21,336	0/0:23,0:23:54.21:0,54,918	0/0:24,0:24:62.95:0,63,923	0/0:36,0:36:99:0,108,1669	1/1:0,34:34:87.29:1216,87,0	1/1:0,24:24:66.22:923,66,0	0/0:30,0:30:90.28:0,90,1370	0/0:17,0:17:51.16:0,51,785	0/0:18,0:18:54.18:0,54,862	0/0:26,0:26:75.26:0,75,1194	1/1:0,19:19:54.18:755,54,0	0/0:20,0:20:60.19:0,60,929	0/0:19,0:19:57.18:0,57,887	0/0:26,0:25:78.27:0,78,1247	0/0:25,0:25:75.22:0,75,1132	0/0:31,0:31:90.28:0,90,1376	1/1:0,13:13:36.12:503,36,0	0/0:22,0:22:66.22:0,66,1034	0/0:35,0:35:99:0,102,1602	0/0:35,0:35:99:0,102,1603	1/1:0,28:28:78.26:1091,78,0	1/1:0,24:24:63.21:880,63,0	1/1:0,20:20:45.15:629,45,0	0/0:23,0:23:69.24:0,69,1103	0/0:32,0:32:93.32:0,93,1480	0/0:25,0:25:75.26:0,75,1194	0/0:26,0:26:78.27:0,78,1246
chr10	58511839	.	GAGTA	G	7381.66	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=15.235;DP=703;FS=2.486;HRun=0;HaplotypeScore=119.6568;InbreedingCoeff=0.9999;MQ=82.28;MQ0=0;MQRankSum=-5.280;QD=41.70;ReadPosRankSum=1.412;VQSLOD=5.0662;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:84.29:0,84,2214	0/0:14,0:14:39.13:0,39,1015	0/0:22,0:22:47.32:0,47,1267	0/0:22,0:22:60.17:0,60,1483	0/0:29,0:29:87.29:0,87,2220	1/1:0,27:27:63.22:1176,63,0	1/1:4,27:31:66.14:1143,66,0	0/0:36,0:36:93.30:0,93,2301	0/0:21,0:21:60.21:0,60,1564	0/0:32,0:32:93.31:0,93,2410	0/0:25,0:24:75.26:0,75,1994	1/1:1,17:18:48.12:860,48,0	0/0:22,0:22:63.22:0,63,1674	0/0:23,0:23:60.21:0,60,1595	0/0:21,0:21:63.22:0,63,1632	0/0:26,0:26:78.27:0,78,2081	0/0:26,0:26:75.23:0,75,1867	1/1:3,17:20:42.14:784,42,0	0/0:21,0:21:54.19:0,54,1401	0/0:31,0:31:90.31:0,90,2358	0/0:29,0:29:87.30:0,87,2292	1/1:3,26:29:75.17:1288,75,0	1/1:3,31:34:80.71:1403,81,0	1/1:1,17:18:39.13:728,39,0	0/0:22,0:22:66.23:0,66,1752	0/0:34,0:34:93.31:0,93,2408	0/0:28,0:28:81.28:0,81,2140	0/0:12,0:12:33.11:0,33,880
chr10	58512302	.	G	GGAGA	966.91	PASS	AB=0.925;AC=35;AF=0.673;AN=52;BaseQRankSum=-1.338;DP=589;FS=20.154;HRun=0;HaplotypeScore=104.3877;InbreedingCoeff=0.3879;MQ=60.57;MQ0=24;MQRankSum=-1.021;QD=2.49;ReadPosRankSum=-1.607;VQSLOD=0.1668;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:30,1:35:27.65:112,0,28	1/1:4,0:4:2.74:12,3,0	0/1:70,0:30:0:0,0,0	./.	1/1:19,0:19:6.02:87,6,0	0/0:18,0:19:5.74:0,6,55	0/1:11,0:11:1.57:2,0,21	1/1:10,0:10:1.72:4,2,0	./.	1/1:13,0:11:2.99:24,3,0	1/1:14,0:13:5.55:62,6,0	0/1:19,0:18:1.21:1,0,41	1/1:8,0:8:2.99:24,3,0	1/1:14,0:15:2.99:24,3,0	1/1:25,1:26:5.67:174,6,0	1/1:8,3:11:3.01:70,3,0	1/1:18,4:25:17.35:247,17,0	0/0:12,0:16:12.01:0,12,112	1/1:16,0:13:6.87:59,7,0	0/1:9,0:12:0:1,0,0	1/1:19,0:18:6:78,6,0	0/0:17,0:18:6.01:0,6,71	0/0:12,0:12:3:0,3,28	0/0:24,0:24:14.75:0,15,178	1/1:22,0:21:6.01:74,6,0	1/1:19,0:17:7.70:56,8,0	0/0:19,0:19:2.96:0,3,20	1/1:15,0:12:0.47:1,0,0
chr10	58512374	.	TTC	T	2933.48	PASS	AB=0.980;AC=30;AF=0.536;AN=56;BaseQRankSum=2.301;DP=418;FS=10.146;HRun=0;HaplotypeScore=83.1325;InbreedingCoeff=0.0456;MQ=82.33;MQ0=2;MQRankSum=-2.420;QD=9.34;ReadPosRankSum=8.446;VQSLOD=1.3621;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:27:37.98:112,0,38	0/0:8,0:8:20.70:0,21,245	0/0:32,0:23:60.33:0,60,763	0/0:27,0:18:38.40:0,38,453	0/1:19,0:19:7.99:76,0,8	1/1:6,6:12:26.78:379,27,0	1/1:1,11:12:9.03:144,9,0	0/0:14,0:14:38.98:0,39,447	1/1:12,0:12:16.24:65,16,0	0/1:15,0:15:36.32:36,0,50	0/1:20,0:20:45.97:74,0,46	1/1:0,10:10:12.04:191,12,0	0/1:7,0:7:10.52:48,0,11	0/1:15,2:16:5.43:84,0,5	0/1:14,0:14:5.70:41,0,6	0/0:3,0:3:6.02:0,6,75	0/0:20,0:20:56.11:0,56,869	1/1:1,13:14:21.04:310,21,0	0/1:10,0:10:7.31:80,0,7	0/1:18,0:18:35.71:133,0,36	0/1:14,1:15:40.75:45,0,41	1/1:6,4:10:22.26:260,22,0	1/1:1,13:14:20.88:298,21,0	1/1:1,13:14:36.08:577,36,0	0/1:9,0:9:3.66:4,0,55	0/1:13,1:14:56.93:57,0,57	0/1:18,1:18:51.19:92,0,51	0/1:12,0:12:12.34:12,0,67
chr10	58512375	.	TCC	T	5535.76	PASS	AB=0.571;AC=43;AF=0.768;AN=56;BaseQRankSum=-3.024;DP=412;FS=1.133;HRun=11;HaplotypeScore=74.9682;InbreedingCoeff=0.8064;MQ=83.65;MQ0=2;MQRankSum=-3.604;QD=17.80;ReadPosRankSum=5.626;VQSLOD=3.6141;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,21:25:60.06:613,60,0	0/0:7,0:8:2.41:0,2,156	0/0:31,0:23:46.55:0,47,521	0/0:25,0:19:31.64:0,32,342	1/1:1,18:19:36.09:379,36,0	1/1:11,0:11:19.28:152,19,0	1/1:12,0:12:8.95:67,9,0	0/0:13,0:13:14.98:0,15,161	1/1:0,12:12:21.05:223,21,0	1/1:2,13:15:36.07:376,36,0	1/1:1,19:20:39.04:402,39,0	1/1:10,0:10:11.94:92,12,0	1/1:1,6:7:12.03:128,12,0	1/1:10,8:17:38.62:364,39,0	1/1:2,12:14:21.03:214,21,0	0/0:3,0:3:5.97:0,6,49	0/0:18,0:19:46.13:0,46,580	1/1:14,0:14:17.89:134,18,0	1/1:3,6:10:27:268,27,0	1/1:3,15:18:35.22:406,35,0	1/1:4,11:15:30:305,30,0	1/1:10,0:10:5.92:64,6,0	1/1:14,0:14:17.77:146,18,0	1/1:14,0:14:35.77:270,36,0	1/1:3,6:9:15.02:160,15,0	1/1:4,10:14:23.19:281,23,0	1/1:4,13:17:9.19:351,9,0	0/1:3,9:12:2.90:142,0,3
chr10	58514146	.	TATTA	T	529.28	PASS	AC=4;AF=0.083;AN=48;BaseQRankSum=4.252;DP=269;FS=6.117;HRun=0;HaplotypeScore=53.5261;InbreedingCoeff=0.5822;MQ=57.27;MQ0=0;MQRankSum=1.801;QD=24.06;ReadPosRankSum=1.569;VQSLOD=2.6620;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,10:13:27.09:445,27,0	./.	./.	./.	1/1:3,6:9:12.04:196,12,0	0/0:13,0:13:33.11:0,33,763	./.	0/0:26,0:26:45.15:0,45,1072	0/0:4,0:4:6.02:0,6,147	0/0:5,0:5:9.03:0,9,220	0/0:6,0:6:12.04:0,12,293	0/0:4,0:4:12.04:0,12,293	0/0:3,0:3:9.03:0,9,215	0/0:10,0:10:9.03:0,9,199	0/0:10,0:10:6.02:0,6,147	0/0:7,0:7:6.02:0,6,140	0/0:21,0:21:48.16:0,48,1141	0/0:9,0:9:24.08:0,24,552	0/0:9,0:9:6.02:0,6,147	0/0:19,0:19:24.08:0,24,587	0/0:5,0:5:9.03:0,9,220	0/0:4,0:4:3.01:0,3,73	0/0:4,0:4:9.03:0,9,220	0/0:5,0:5:3.01:0,3,73	0/0:8,0:8:21.07:0,21,498	0/0:13,0:13:27.09:0,27,639	0/0:14,0:14:21.07:0,21,498	0/0:19,0:19:48.16:0,48,1173
chr10	58514233	.	CATATAT	C	2017.47	PASS	AB=0.935;AC=30;AF=0.714;AN=42;BaseQRankSum=5.579;DP=216;FS=28.205;HRun=0;HaplotypeScore=66.4701;InbreedingCoeff=0.1883;MQ=56.27;MQ0=2;MQRankSum=-0.973;QD=11.15;ReadPosRankSum=1.472;VQSLOD=0.3861;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:6:2.99:0,3,24	./.	./.	0/0:3,0:1:0:0,0,0	0/1:3,0:4:0:0,0,0	0/1:13,1:14:28.49:87,0,28	1/1:2,0:2:2.80:13,3,0	0/1:22,0:28:99:139,0,294	1/1:0,1:2:6.02:112,6,0	1/1:3,7:15:28.75:567,29,0	1/1:6,6:15:3.48:64,3,0	./.	1/1:0,2:2:3.01:63,3,0	1/1:3,4:7:3.01:63,3,0	1/1:1,1:8:6.02:113,6,0	0/0:3,0:3:6.01:0,6,109	0/1:25,0:25:99:116,0,369	1/1:12,0:12:2.84:14,3,0	1/1:5,0:9:11.14:194,11,0	./.	./.	1/1:2,0:2:2.94:18,3,0	0/0:2,0:2:6.02:0,6,125	./.	./.	1/1:3,0:11:24.08:414,24,0	1/1:1,3:4:2.68:62,3,0	1/1:12,0:19:6.02:100,6,0
chr10	58514258	.	ATATGTGTGTGTGTGTGTG	A	1010.88	PASS	AB=1.000;AC=14;AF=0.318;AN=44;BaseQRankSum=1.238;DP=229;FS=0.000;HRun=0;HaplotypeScore=117.6608;InbreedingCoeff=0.1594;MQ=47.73;MQ0=4;MQRankSum=0.511;QD=8.64;ReadPosRankSum=0.211;VQSLOD=1.9375;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	0/0:5,0:5:2.90:0,3,104	1/1:11,3:14:18.04:544,18,0	1/1:3,0:2:2.74:130,3,0	0/1:26,0:26:99:124,0,1638	0/1:5,0:4:6.83:7,0,356	0/1:15,0:15:13.46:13,0,1194	0/0:12,0:12:8.85:0,9,571	./.	0/0:5,0:5:9.03:0,9,551	0/0:5,0:5:6.02:0,6,369	0/1:15,0:14:1.25:1,0,708	0/0:2,0:2:6.02:0,6,460	0/0:24,0:24:14.69:0,15,2386	1/1:1,17:18:3.01:157,3,0	0/1:11,0:11:1.23:1,0,1227	0/0:10,0:10:2.58:0,3,199	0/0:4,0:3:3.01:0,3,217	1/1:0,2:2:3.01:156,3,0	0/0:3,0:3:2.40:0,2,24	./.	0/0:8,0:8:9.03:0,9,648	0/0:17,0:17:11.14:0,11,1823	0/0:9,0:9:21.07:0,21,1387	0/1:8,0:8:6.41:6,0,287
chr10	58514260	.	ATGTGTGTGTGTGTGTG	A	659.03	PASS	AB=1.000;AC=9;AF=0.205;AN=44;BaseQRankSum=1.772;DP=239;FS=4.933;HRun=0;HaplotypeScore=118.4912;InbreedingCoeff=0.4638;MQ=47.83;MQ0=4;MQRankSum=-2.556;QD=16.90;ReadPosRankSum=1.414;VQSLOD=2.2351;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	0/0:6,0:6:5.89:0,6,209	1/1:8,6:14:14.97:408,15,0	1/1:3,0:2:2.74:130,3,0	0/0:29,0:29:46:0,46,2201	0/0:5,0:4:6.02:0,6,354	0/0:15,0:15:28.91:0,29,1151	0/0:14,0:14:15:0,15,941	./.	0/0:5,0:5:9.03:0,9,525	0/0:5,0:5:6.02:0,6,358	0/0:15,0:14:12.04:0,12,711	0/0:3,0:3:9.03:0,9,652	0/0:26,0:25:50.39:0,50,2528	0/1:18,0:18:14.84:116,0,15	0/0:13,0:13:30.05:0,30,1620	0/0:10,0:10:2.58:0,3,199	0/0:4,0:3:3.01:0,3,216	1/1:2,0:2:3.01:122,3,0	1/1:2,0:2:0.47:1,0,0	./.	0/0:8,0:8:9.03:0,9,644	0/0:18,0:18:44.47:0,44,2006	0/0:9,0:9:21.07:0,21,1373	0/0:8,0:8:6.02:0,6,293
chr10	58519309	.	T	TAGG	28620.14	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-14.063;DP=676;FS=0.365;HRun=0;HaplotypeScore=88.2142;InbreedingCoeff=0.9982;MQ=90.02;MQ0=0;MQRankSum=-10.123;QD=53.90;ReadPosRankSum=7.940;VQSLOD=6.7707;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,37:37:90.31:1987,90,0	0/0:12,0:12:30.06:0,30,429	0/0:36,0:36:99:0,99,1535	0/0:28,0:27:75:0,75,1116	1/1:2,17:21:51.13:1079,51,0	1/1:2,16:18:45.15:993,45,0	1/1:2,22:24:66.18:1410,66,0	0/0:23,0:23:57.19:0,57,891	1/1:2,24:27:72.25:1587,72,0	1/1:3,20:23:63.21:1315,63,0	1/1:4,15:19:39.13:861,39,0	1/1:4,17:22:47.82:1059,48,0	1/1:7,24:32:84.16:1706,84,0	1/1:3,24:27:72.25:1570,72,0	1/1:1,30:31:87.30:1917,87,0	0/0:15,0:15:36.12:0,36,576	0/0:31,0:31:78.72:0,79,1231	1/1:3,23:26:66.23:1457,66,0	1/1:4,16:19:51.17:1051,51,0	1/1:3,27:31:72.25:1586,72,0	1/1:0,21:21:57.20:1258,57,0	1/1:3,19:24:45.15:993,45,0	1/1:2,22:26:60.21:1324,60,0	1/1:1,26:27:66.23:1457,66,0	1/1:3,21:24:57.20:1258,57,0	1/1:2,23:25:69.24:1496,69,0	1/1:3,14:18:39.13:859,39,0	1/1:0,6:8:18.06:397,18,0
chr10	58521131	.	AC	A	1588.52	PASS	AB=1.000;AC=39;AF=0.722;AN=54;BaseQRankSum=3.934;DP=467;FS=2.549;HRun=11;HaplotypeScore=95.2005;InbreedingCoeff=0.6852;MQ=72.83;MQ0=3;MQRankSum=-2.817;QD=5.00;ReadPosRankSum=3.064;VQSLOD=1.9811;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:36,1:37:46.01:201,46,0	1/1:5,4:9:5.97:49,6,0	0/0:54,0:28:27.52:0,28,169	0/0:29,1:13:7.17:0,7,78	1/1:11,0:11:25.30:115,25,0	0/1:8,0:8:6.81:7,0,55	0/1:21,0:21:28.82:29,0,68	1/1:4,8:12:23.93:191,24,0	1/1:18,0:18:22.58:66,23,0	1/1:20,0:20:35.58:118,36,0	1/1:12,0:12:18.51:55,19,0	0/0:13,0:13:14.36:0,14,157	1/1:24,0:24:42.78:125,43,0	1/1:14,0:14:22.41:65,22,0	1/1:12,0:12:16.29:47,16,0	1/1:1,0:13:18.33:53,18,0	1/1:1,18:19:9.98:288,10,0	0/0:12,0:12:26.06:0,26,150	1/1:12,0:12:16.55:48,17,0	1/1:9,0:9:16.48:48,16,0	1/1:18,0:18:14.25:41,14,0	0/1:10,0:10:15.02:15,0,82	0/0:10,0:10:17.75:0,18,123	0/0:27,0:26:31.48:0,31,232	1/1:11,0:12:22.96:67,23,0	1/1:10,0:10:20.33:59,20,0	1/1:17,0:17:30.66:90,31,0	./.
chr10	58521139	.	CCCCA	C	7655.28	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=-9.640;DP=457;FS=4.724;HRun=0;HaplotypeScore=96.9771;InbreedingCoeff=0.7610;MQ=74.27;MQ0=3;MQRankSum=-1.788;QD=34.02;ReadPosRankSum=3.109;VQSLOD=4.4573;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:29:5.59:6,0,103	0/0:8,0:8:15.01:0,15,191	0/0:53,0:27:51.82:0,52,549	0/0:37,0:20:17.20:0,17,372	0/1:13,0:13:15.52:16,0,72	0/1:10,0:10:14.08:14,0,153	0/0:16,0:16:35.66:0,36,395	0/0:12,0:12:36.06:0,36,428	1/1:0,13:13:33.11:608,33,0	1/1:1,21:22:60.11:950,60,0	1/1:0,10:10:27.09:481,27,0	0/0:13,0:13:29.25:0,29,405	1/1:0,22:22:63.22:1162,63,0	1/1:0,14:14:33.11:610,33,0	1/1:2,11:13:24.08:443,24,0	0/0:15,0:15:35.99:0,36,338	0/0:20,0:20:45.15:0,45,704	0/0:13,0:13:30.09:0,30,362	1/1:2,12:14:34.92:558,35,0	1/1:0,9:9:27.02:445,27,0	1/1:0,15:15:21.07:388,21,0	0/0:10,0:10:29.34:0,29,332	0/0:11,0:11:5.46:0,5,272	0/0:24,0:23:54.29:0,54,641	1/1:3,9:12:36.10:583,36,0	1/1:0,11:11:33.09:557,33,0	1/1:0,17:17:45:814,45,0	1/1:1,0:1:2.97:20,3,0
chr10	58521141	.	CCAA	C	2379.19	PASS	AB=0.930;AC=36;AF=0.643;AN=56;BaseQRankSum=4.333;DP=467;FS=7.607;HRun=0;HaplotypeScore=107.4718;InbreedingCoeff=0.5021;MQ=72.60;MQ0=3;MQRankSum=-3.086;QD=7.37;ReadPosRankSum=7.511;VQSLOD=0.8079;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,30:32:57.14:861,57,0	0/0:7,0:7:11.97:0,12,118	0/0:49,0:25:44.02:0,44,510	0/0:37,0:20:12.02:0,12,240	1/1:2,12:14:12.72:319,13,0	0/1:8,2:10:5.21:211,0,5	1/1:16,1:17:15.13:131,15,0	0/0:12,0:12:13.26:0,13,330	1/1:13,0:13:21.11:68,21,0	0/1:22,0:22:10.37:72,0,10	1/1:10,0:10:14.45:42,14,0	0/1:16,1:17:71.89:72,0,74	1/1:22,0:22:38.32:128,38,0	1/1:14,0:14:17.60:48,18,0	1/1:12,0:12:11.42:33,11,0	0/0:14,0:14:33.08:0,33,374	0/0:23,0:23:54.01:0,54,587	1/1:14,0:14:16.08:40,16,0	0/1:14,0:14:0.74:21,0,1	1/1:9,0:9:11.45:31,11,0	1/1:15,0:15:13:43,13,0	0/1:11,2:13:10.24:129,0,10	0/1:13,1:14:30.01:30,0,54	1/1:20,1:20:5.74:94,6,0	1/1:12,0:12:19.08:63,19,0	1/1:11,0:11:14.63:46,15,0	1/1:17,0:17:28.25:86,28,0	0/0:1,0:1:1.82:0,2,5
chr10	58521689	.	A	ACACT	9082.50	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-12.275;DP=643;FS=2.811;HRun=0;HaplotypeScore=115.9586;InbreedingCoeff=0.9591;MQ=59.02;MQ0=10;MQRankSum=1.026;QD=32.44;ReadPosRankSum=1.106;VQSLOD=4.4460;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:87.20:0,87,1293	0/0:5,0:5:9.03:0,9,150	0/0:46,0:19:6.33:0,6,354	0/0:39,0:25:40.07:0,40,624	0/0:19,0:19:45.09:0,45,660	0/0:24,0:24:48.11:0,48,696	0/0:19,0:19:42.13:0,42,658	0/0:21,0:21:45.11:0,45,605	1/1:2,13:17:36.59:886,37,0	1/1:5,19:27:60.13:1118,60,0	1/1:3,12:15:18.06:444,18,0	0/0:19,0:19:42.14:0,42,699	1/1:5,20:24:32.98:810,33,0	1/1:5,12:18:21.07:517,21,0	1/1:3,8:13:18.06:444,18,0	0/0:11,0:11:27.06:0,27,396	0/0:20,0:20:51.16:0,51,808	0/0:20,0:20:48.11:0,48,698	1/1:5,6:13:24.01:339,24,0	1/1:3,14:20:26.98:557,27,0	1/1:11,35:47:48.16:1183,48,0	0/0:29,0:29:78.25:0,78,1259	0/0:19,0:19:33.10:0,33,521	0/0:36,0:36:90.27:0,90,1421	1/1:2,10:14:9.03:222,9,0	1/1:6,24:30:69.16:1455,69,0	1/1:7,18:25:41.85:887,42,0	1/1:1,10:11:9.03:222,9,0
chr10	58524755	.	AG	A	15506.91	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=5.954;DP=739;FS=1.602;HRun=7;HaplotypeScore=77.7086;InbreedingCoeff=0.9995;MQ=92.35;MQ0=0;MQRankSum=-7.788;QD=26.33;ReadPosRankSum=6.549;VQSLOD=4.8226;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,42:45:99:1132,111,0	0/0:10,0:10:27.03:0,27,318	0/0:32,1:33:71.91:0,72,965	0/0:31,0:31:69.03:0,69,745	1/1:2,26:28:75.13:755,75,0	1/1:2,25:27:69.15:703,69,0	1/1:5,23:28:63.14:643,63,0	0/0:24,0:24:60.15:0,60,706	1/1:5,20:25:63.12:635,63,0	1/1:0,30:30:90.14:891,90,0	1/1:1,12:13:33.07:337,33,0	1/1:4,25:29:69.14:704,69,0	1/1:4,26:30:69.16:704,69,0	1/1:1,25:26:66.15:673,66,0	1/1:2,29:31:81.18:826,81,0	0/0:27,1:28:25.96:0,26,886	0/0:24,0:24:72.22:0,72,894	1/1:1,15:16:42.10:429,42,0	1/1:3,14:17:42.06:411,42,0	1/1:2,26:28:75.17:765,75,0	1/1:2,35:37:99:1071,105,0	1/1:1,29:30:81.18:826,81,0	1/1:2,18:20:51.11:520,51,0	1/1:2,27:29:78.18:796,78,0	1/1:2,25:27:66.15:673,66,0	1/1:2,25:27:75.15:758,75,0	1/1:1,30:31:78.18:796,78,0	1/1:0,15:15:45.10:459,45,0
chr10	58525356	.	GCATA	G	1716.79	PASS	AB=1.000;AC=25;AF=0.446;AN=56;BaseQRankSum=6.329;DP=538;FS=11.078;HRun=0;HaplotypeScore=97.0487;InbreedingCoeff=0.6402;MQ=63.89;MQ0=7;MQRankSum=2.181;QD=7.53;ReadPosRankSum=0.665;VQSLOD=1.7613;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:71.99:0,72,951	0/0:9,0:9:24.02:0,24,396	0/1:21,0:7:13.57:14,0,114	0/0:20,0:7:4.74:0,5,85	0/0:25,0:25:43.20:0,43,827	0/0:22,0:22:35.54:0,36,416	0/0:29,0:29:50.23:0,50,553	0/0:20,0:20:41.93:0,42,366	1/1:17,1:18:3.48:56,3,0	1/1:31,0:31:72.52:579,73,0	1/1:17,0:17:3.91:40,4,0	0/0:20,0:19:20.11:0,20,347	0/1:6,0:6:7.49:61,0,7	1/1:11,1:11:4.42:41,4,0	1/1:18,0:18:10.57:191,11,0	0/0:17,0:17:41.93:0,42,538	0/0:23,0:23:62.87:0,63,902	0/0:26,0:25:17.21:0,17,451	1/1:12,0:12:26.88:217,27,0	1/1:2,17:18:9.30:94,9,0	0/1:19,0:19:16.34:181,0,16	0/0:21,0:20:32.73:0,33,335	0/0:16,0:16:13.88:0,14,249	0/0:31,0:30:25.76:0,26,493	1/1:17,0:17:1.28:5,1,0	1/1:14,0:14:25.79:195,26,0	1/1:14,0:14:0.36:1,0,0	1/1:10,0:10:29.92:237,30,0
chr10	58525361	.	CAT	C	3122.35	PASS	AB=0.904;AC=29;AF=0.518;AN=56;BaseQRankSum=8.429;DP=580;FS=6.301;HRun=0;HaplotypeScore=82.9720;InbreedingCoeff=0.5682;MQ=63.47;MQ0=7;MQRankSum=2.755;QD=10.14;ReadPosRankSum=0.588;VQSLOD=2.8680;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:83.71:0,84,834	0/0:10,0:10:29.65:0,30,400	0/1:20,0:7:13.57:14,0,114	0/0:20,0:7:4.69:0,5,85	0/0:25,0:25:65.32:0,65,741	0/1:24,0:24:1.62:2,0,223	0/0:29,0:29:41.09:0,41,442	0/0:19,0:19:47.74:0,48,400	1/1:1,16:17:5.99:68,6,0	1/1:2,30:32:89.10:715,89,0	1/1:2,17:19:8.98:115,9,0	0/1:21,0:20:8.44:8,0,259	1/1:9,1:10:4.03:146,4,0	1/1:2,18:19:10.69:141,11,0	1/1:15,6:21:60.01:666,60,0	0/0:19,0:19:6.58:0,7,517	0/0:28,0:28:27.71:0,28,768	0/0:30,0:29:14.53:0,15,345	1/1:14,0:14:29.10:224,29,0	1/1:18,1:18:12.76:115,13,0	1/1:18,1:19:13.37:277,13,0	0/0:19,0:18:2.63:0,3,212	0/1:18,0:18:16.48:16,0,177	0/0:36,0:35:18.48:0,18,350	1/1:2,14:16:13.29:182,13,0	1/1:2,13:15:24.80:358,25,0	0/1:1,12:13:17.89:39,0,18	1/1:10,0:10:29.92:237,30,0
chr10	58525363	.	TAC	T	1602.89	PASS	AB=0.926;AC=28;AF=0.560;AN=50;BaseQRankSum=7.028;DP=604;FS=30.255;HRun=0;HaplotypeScore=90.4303;InbreedingCoeff=-0.1506;MQ=61.81;MQ0=8;MQRankSum=2.043;QD=3.38;ReadPosRankSum=5.925;VQSLOD=0.0373;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,1:38:29.92:0,30,388	0/0:12,0:12:13.14:0,13,283	./.	./.	0/1:23,0:24:8.25:8,0,302	1/1:11,12:24:23.90:242,24,0	1/1:23,6:29:11.06:104,11,0	0/0:19,0:19:14.87:0,15,139	0/1:19,0:18:16.43:22,0,16	1/1:32,0:32:3.63:24,4,0	1/1:17,1:18:8.93:63,9,0	0/1:12,10:22:99:144,0,139	0/1:10,0:10:11.61:14,0,12	0/1:24,0:23:16.82:54,0,17	0/1:25,0:25:36.84:157,0,37	0/1:21,0:21:37.15:37,0,340	0/1:26,3:29:33.45:33,0,473	0/1:17,11:29:28.35:165,0,28	0/0:12,0:12:1.77:0,2,4	0/1:19,0:18:1.96:29,0,2	0/1:22,0:22:5.12:5,0,97	1/1:16,3:18:7.93:134,8,0	0/1:11,6:18:23.87:127,0,24	1/1:21,13:35:19.95:226,20,0	1/1:16,0:16:13.11:83,13,0	0/1:20,0:20:73.68:74,0,76	0/1:15,0:15:15.10:15,0,30	./.
chr10	58526834	.	TA	T	3210.05	PASS	AB=1.000;AC=27;AF=0.519;AN=52;BaseQRankSum=6.935;DP=467;FS=9.277;HRun=10;HaplotypeScore=69.7653;InbreedingCoeff=0.8252;MQ=33.31;MQ0=73;MQRankSum=-1.391;QD=12.64;ReadPosRankSum=3.298;VQSLOD=2.8438;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:12.03:0,12,127	0/0:13,0:13:33.01:0,33,335	./.	./.	0/0:26,0:24:23.89:0,24,249	0/0:17,0:17:17.98:0,18,183	0/0:12,0:8:18.05:0,18,197	0/1:15,0:9:0.99:1,0,147	1/1:2,14:15:8.99:78,9,0	1/1:2,28:29:74.90:637,75,0	1/1:3,17:20:17.98:156,18,0	0/0:19,0:17:30.08:0,30,330	1/1:1,20:21:26.77:213,27,0	1/1:1,13:12:11.99:104,12,0	1/1:0,19:19:26.66:233,27,0	0/0:13,0:13:27.07:0,27,298	0/0:12,0:8:6.02:0,6,66	0/0:11,0:9:5.62:0,6,51	1/1:1,5:4:8.99:78,9,0	1/1:2,26:27:62.98:545,63,0	1/1:1,6:4:3:26,3,0	0/0:19,0:19:30:0,30,313	0/0:14,0:14:15.02:0,15,155	0/0:2,1:3:6.02:0,6,66	1/1:0,21:21:41.99:363,42,0	1/1:3,23:25:65.92:562,66,0	1/1:0,27:25:44.74:390,45,0	1/1:0,4:4:3:26,3,0
chr10	58527125	.	GT	G	2791.14	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=8.391;DP=652;FS=4.588;HRun=10;HaplotypeScore=92.4240;InbreedingCoeff=0.9533;MQ=76.65;MQ0=0;MQRankSum=2.078;QD=20.08;ReadPosRankSum=1.043;VQSLOD=4.3238;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,2:29:55.16:0,55,823	0/0:11,0:11:24.01:0,24,251	0/0:13,0:12:15.01:0,15,145	0/0:28,0:28:57.12:0,57,608	0/0:32,0:32:84.18:0,84,906	1/1:2,31:33:86.98:755,87,0	1/1:1,18:19:44.99:391,45,0	0/0:38,0:38:58.13:0,58,851	0/0:11,1:12:1.02:0,1,239	0/0:31,0:31:87.22:0,87,947	0/0:25,0:25:72.11:0,72,765	1/1:0,18:18:53.99:469,54,0	0/0:35,0:35:93.19:0,93,1004	0/0:27,0:27:75:0,75,762	0/0:20,1:21:34.11:0,34,604	0/0:25,0:25:69.12:0,69,741	0/0:23,1:25:33.92:0,34,577	1/1:2,12:14:35.99:313,36,0	0/0:24,1:25:39.95:0,40,642	0/0:34,0:34:81.20:0,81,880	0/0:16,0:16:39.11:0,39,431	1/1:7,14:21:41.98:365,42,0	1/1:1,17:18:47.94:410,48,0	1/1:3,13:16:32.99:287,33,0	0/0:18,1:19:16.07:0,16,405	0/0:21,0:21:54.15:0,54,597	0/0:31,0:31:81.22:0,81,896	0/0:15,0:15:39.11:0,39,431
chr10	58533171	.	CA	C	7901.04	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=12.054;DP=590;FS=6.676;HRun=7;HaplotypeScore=87.8126;InbreedingCoeff=0.9991;MQ=64.91;MQ0=2;MQRankSum=0.990;QD=26.69;ReadPosRankSum=3.869;VQSLOD=5.3688;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:69.02:0,69,785	0/0:8,0:8:24.07:0,24,291	0/0:18,0:13:22.36:0,22,256	0/0:16,0:14:35.38:0,35,356	0/0:32,0:32:87.24:0,87,1052	0/0:20,0:20:54.16:0,54,665	0/0:12,0:12:33.01:0,33,378	0/0:30,0:30:72.22:0,72,894	1/1:2,13:15:29.27:385,29,0	1/1:3,21:24:63.11:630,63,0	1/1:3,20:23:57.12:581,57,0	0/0:16,0:16:45.13:0,45,553	1/1:0,17:17:51.12:520,51,0	1/1:2,19:21:54.12:550,54,0	1/1:2,18:20:51.11:520,51,0	0/0:12,0:12:33.11:0,33,415	0/0:27,0:27:63.20:0,63,792	0/0:21,0:21:54.08:0,54,639	1/1:4,18:18:51.07:505,51,0	1/1:4,35:39:99:1010,99,0	1/1:1,24:25:63.14:643,63,0	0/0:23,0:23:60.18:0,60,736	0/0:15,0:15:45.14:0,45,563	0/0:19,0:18:42.13:0,42,527	1/1:1,19:20:57.13:581,57,0	1/1:2,23:25:69.13:691,69,0	1/1:1,29:30:84.19:857,84,0	1/1:1,14:15:42.09:428,42,0
chr10	58535304	.	C	CAA	6970.27	PASS	AB=0.632;AC=39;AF=0.696;AN=56;BaseQRankSum=0.701;DP=499;FS=5.658;HRun=10;HaplotypeScore=85.3584;InbreedingCoeff=0.8946;MQ=63.84;MQ0=0;MQRankSum=1.090;QD=20.03;ReadPosRankSum=0.436;VQSLOD=4.0370;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:19:41.59:0,42,391	0/0:10,0:10:21.01:0,21,214	0/0:17,0:16:20.66:0,21,211	0/0:13,0:8:10.66:0,11,95	0/0:34,0:34:63.10:0,63,640	1/1:2,1:25:39.93:140,40,0	0/1:5,0:12:10.03:41,0,10	0/0:24,0:25:47.78:0,48,540	1/1:1,11:12:24.04:332,24,0	1/1:8,21:33:58.17:747,58,0	1/1:6,18:24:38.99:487,39,0	1/1:1,1:13:22.93:90,23,0	1/1:3,13:16:30.10:447,30,0	1/1:1,16:18:35.61:493,36,0	1/1:2,12:14:33.11:480,33,0	0/0:13,0:14:23.77:0,24,289	0/0:18,0:17:34.81:0,35,339	1/1:12,0:16:10.03:43,10,0	1/1:6,11:19:33.11:472,33,0	1/1:3,20:24:59.56:763,60,0	1/1:1,7:10:17.54:216,18,0	1/1:1,0:20:30.42:116,30,0	1/1:9,0:17:28.41:124,28,0	1/1:2,2:9:21.49:158,21,0	1/1:5,11:17:39.13:561,39,0	1/1:11,8:19:39.08:529,39,0	1/1:6,7:16:44.62:594,45,0	1/1:4,3:7:9.03:135,9,0
chr10	58535397	.	C	CA	7175.85	PASS	AB=0.654;AC=43;AF=0.768;AN=56;BaseQRankSum=-3.966;DP=466;FS=10.970;HRun=10;HaplotypeScore=59.9235;InbreedingCoeff=0.8929;MQ=60.84;MQ0=3;MQRankSum=0.589;QD=19.66;ReadPosRankSum=1.150;VQSLOD=5.3061;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:8,1:17:1.19:83,0,1	0/0:9,0:9:26.97:0,27,222	0/0:14,0:9:20.71:0,21,152	0/0:13,0:9:8.54:0,9,117	1/1:7,0:30:49.73:278,50,0	1/1:10,10:21:21.16:388,21,0	1/1:1,7:9:23.89:238,24,0	0/0:30,1:30:21.90:0,22,385	1/1:1,18:19:17.47:391,17,0	1/1:3,15:18:45.08:464,45,0	1/1:8,9:18:35.91:358,36,0	1/1:10,6:16:20.43:393,20,0	1/1:1,7:9:20.85:194,21,0	1/1:7,2:9:15.01:139,15,0	1/1:0,11:11:30.08:320,30,0	0/0:10,0:11:25.99:0,26,203	0/0:23,0:22:56.84:0,57,460	1/1:3,12:16:30.38:303,30,0	1/1:4,11:13:11.38:299,11,0	1/1:10,13:25:65.80:610,66,0	1/1:2,5:7:9.02:96,9,0	1/1:9,10:20:41.82:397,42,0	1/1:3,13:16:38.86:374,39,0	1/1:3,11:15:11.28:309,11,0	1/1:2,17:20:44.91:450,45,0	1/1:3,16:19:42.07:431,42,0	1/1:4,21:25:26.35:470,26,0	1/1:3,6:9:18:191,18,0
chr10	58538460	.	A	AAAAAT	6104.19	PASS	AB=1.000;AC=27;AF=0.540;AN=50;BaseQRankSum=-8.124;DP=302;FS=11.618;HRun=0;HaplotypeScore=44.4490;InbreedingCoeff=0.7202;MQ=34.90;MQ0=34;MQRankSum=-2.342;QD=35.91;ReadPosRankSum=2.683;VQSLOD=3.2602;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:18.03:0,18,303	0/0:3,0:3:3.01:0,3,56	./.	./.	0/0:14,0:14:24.08:0,24,452	0/0:17,0:17:21.07:0,21,389	0/0:5,0:3:6.02:0,6,113	0/0:22,0:17:27.05:0,27,423	1/1:7,9:16:27.09:774,27,0	1/1:4,9:12:24.08:689,24,0	1/1:6,3:8:6.02:172,6,0	0/0:13,0:11:6.02:0,6,113	1/1:3,4:8:9.03:258,9,0	1/1:7,3:10:6.02:171,6,0	1/1:7,3:10:6.02:172,6,0	0/0:5,0:5:15.01:0,15,216	0/1:11,0:7:39.44:39,0,193	0/0:11,0:9:14.99:0,15,282	1/1:3,4:5:12:246,12,0	1/1:5,7:11:24.08:659,24,0	1/1:1,5:5:6.02:172,6,0	0/0:5,0:5:3.01:0,3,56	0/0:9,0:9:5.65:0,6,112	./.	1/1:11,10:21:30.02:859,30,0	1/1:5,11:15:33.11:947,33,0	1/1:2,14:16:24.08:688,24,0	1/1:6,3:11:9.03:258,9,0
chr10	58538744	.	CACATAT	C	234.40	PASS	AB=1.000;AC=14;AF=0.304;AN=46;BaseQRankSum=-1.834;DP=183;FS=8.559;HRun=0;HaplotypeScore=61.9206;InbreedingCoeff=0.1806;MQ=61.48;MQ0=0;MQRankSum=-1.113;QD=3.55;ReadPosRankSum=-3.340;VQSLOD=-0.6041;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:6:14.99:0,15,175	./.	0/0:9,0:4:8.72:0,9,60	0/0:12,0:6:14.61:0,15,104	./.	1/1:1,6:8:6.02:105,6,0	0/1:5,0:5:13.22:61,0,13	0/0:21,0:20:33.65:0,34,870	0/0:3,0:3:5.99:0,6,49	0/0:6,0:6:14.97:0,15,154	0/0:3,0:3:9.01:0,9,140	1/1:2,0:2:5.90:41,6,0	0/0:4,0:4:6:0,6,74	0/0:4,0:4:9.01:0,9,125	0/1:4,0:4:16.46:16,0,154	0/0:3,0:3:6.02:0,6,139	0/0:24,0:24:33.19:0,33,952	1/1:3,0:3:5.94:41,6,0	0/0:11,0:11:12.64:0,13,268	./.	0/0:5,0:5:6.02:0,6,99	./.	./.	1/1:2,0:2:2.99:24,3,0	0/1:4,0:4:15.23:15,0,88	0/1:9,0:9:13.89:14,0,152	0/1:12,0:12:15.03:15,0,189	0/1:17,0:17:47.36:47,0,468
chr10	58538746	.	C	CAT	153.27	PASS	AB=0.853;AC=4;AF=0.111;AN=36;BaseQRankSum=-4.078;DP=178;FS=3.789;HRun=0;HaplotypeScore=53.0879;InbreedingCoeff=-0.0119;MQ=58.92;MQ0=0;MQRankSum=1.644;QD=3.01;ReadPosRankSum=0.670;VQSLOD=1.5880;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:6,0:6:2.22:7,2,0	./.	0/0:7,0:3:2.80:0,3,13	0/0:13,0:7:2.84:0,3,17	./.	0/0:8,0:8:5.88:0,6,36	./.	0/1:21,0:20:22.93:23,0,96	./.	0/0:6,0:6:3.01:0,3,34	0/0:3,0:3:3.01:0,3,34	./.	0/0:4,0:4:3.01:0,3,34	0/0:4,0:4:6.02:0,6,68	0/0:4,0:4:11.86:0,12,103	0/0:2,0:3:5.85:0,6,48	0/1:14,10:24:47.53:211,0,48	./.	0/0:9,0:11:8.43:0,8,61	./.	0/0:3,0:3:3.01:0,3,34	./.	./.	./.	0/0:4,0:4:5.85:0,6,48	0/0:7,0:9:17.68:0,18,135	0/0:10,0:12:5.91:0,6,49	0/0:16,0:17:32.63:0,33,292
chr10	58538891	.	TACACAC	T	923.77	PASS	AB=0.913;AC=31;AF=0.738;AN=42;BaseQRankSum=3.681;DP=447;FS=0.000;HRun=0;HaplotypeScore=107.5353;InbreedingCoeff=0.1962;MQ=70.49;MQ0=11;MQRankSum=-2.587;QD=3.74;ReadPosRankSum=0.547;VQSLOD=1.9560;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	0/0:5,0:5:12:0,12,128	./.	0/0:39,0:22:0:0,0,0	./.	1/1:14,0:15:6.02:81,6,0	1/1:27,0:31:2.75:39,3,0	0/0:17,0:17:8.06:0,8,81	1/1:7,1:8:6.02:94,6,0	1/1:10,0:10:2.87:29,3,0	1/1:8,4:11:2.97:20,3,0	1/1:9,0:11:6.02:84,6,0	0/1:11,0:10:0:0,0,0	1/1:9,5:14:2.80:60,3,0	1/1:8,3:11:3.01:60,3,0	./.	0/1:17,0:18:36.18:36,0,308	1/1:13,0:14:3.01:42,3,0	0/0:13,0:13:0.47:0,0,1	1/1:5,2:7:3.01:60,3,0	./.	./.	./.	1/1:19,0:28:6.02:84,6,0	1/1:13,0:13:3.01:58,3,0	1/1:10,3:13:4.30:117,4,0	1/1:15,2:17:6.02:120,6,0	0/1:8,2:10:33.86:54,0,34
chr10	58540152	.	AG	A	13574.23	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=15.335;DP=705;FS=3.075;HRun=1;HaplotypeScore=69.5972;InbreedingCoeff=0.9990;MQ=88.87;MQ0=0;MQRankSum=-4.659;QD=40.04;ReadPosRankSum=3.289;VQSLOD=5.6063;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,126,1962	0/0:7,0:7:21.07:0,21,336	0/0:25,0:25:75.23:0,75,1148	0/0:26,0:26:72.24:0,72,1118	0/0:26,0:26:78.27:0,78,1247	0/0:19,0:19:54.18:0,54,863	0/0:25,0:25:75.24:0,75,1171	0/0:26,0:26:78.26:0,78,1224	1/1:0,26:26:78.26:1091,78,0	1/1:0,26:26:78.24:1073,78,0	1/1:0,13:13:33.11:461,33,0	0/0:25,0:25:75.24:0,75,1176	1/1:0,28:28:75.25:1049,75,0	1/1:0,28:28:81.26:1133,81,0	1/1:0,25:25:69.23:965,69,0	0/0:23,1:24:30.27:0,30,1061	0/0:34,0:34:99:0,102,1631	0/0:11,0:11:33.11:0,33,518	1/1:0,19:19:54.16:735,54,0	1/1:0,24:24:69.20:944,69,0	1/1:0,59:59:99:2431,175,0	0/0:23,0:23:69.24:0,69,1103	0/0:21,0:21:63.20:0,63,984	0/0:32,0:32:96.28:0,96,1463	1/1:0,23:23:69.23:965,69,0	1/1:1,30:31:45.59:1174,46,0	1/1:0,29:29:87.29:1217,87,0	1/1:0,8:8:24.08:335,24,0
chr10	58541390	.	CCCCTCTCT	C	1031.75	PASS	AB=0.902;AC=10;AF=0.179;AN=56;BaseQRankSum=-1.931;DP=408;FS=7.186;HRun=0;HaplotypeScore=88.8286;InbreedingCoeff=-0.0379;MQ=54.66;MQ0=37;MQRankSum=-0.025;QD=7.48;ReadPosRankSum=5.257;VQSLOD=0.3502;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:19:35.32:0,35,409	0/0:4,0:4:5.99:0,6,68	0/0:26,0:12:9.66:0,10,385	0/0:48,0:15:15.17:0,15,196	0/0:23,0:19:18.30:0,18,148	0/1:22,2:22:73.81:109,0,74	1/1:7,17:23:4.57:115,5,0	0/0:20,0:19:28.79:0,29,503	0/0:8,0:8:3.47:0,3,27	0/1:7,0:5:9.04:9,0,18	0/0:5,0:5:3:0,3,27	0/1:5,7:11:40.28:105,0,40	0/1:7,0:7:30.81:31,0,112	0/0:9,0:7:15.90:0,16,162	0/0:11,0:9:18:0,18,158	0/0:16,0:16:39.03:0,39,676	0/0:19,0:18:38.98:0,39,715	0/1:12,1:13:20.34:342,0,20	0/0:6,0:3:5.99:0,6,48	0/0:7,0:6:3.01:0,3,30	0/0:15,0:14:2.42:0,2,63	0/1:16,1:16:32.87:139,0,33	0/1:11,3:14:0.68:194,0,1	0/1:19,0:19:50.94:125,0,51	0/0:7,0:7:15.33:0,15,114	0/0:5,0:5:11.93:0,12,97	0/0:11,0:11:9.02:0,9,106	0/0:4,0:3:3.01:0,3,30
chr10	58541391	.	CCCT	C	462.46	PASS	AB=0.984;AC=18;AF=0.321;AN=56;BaseQRankSum=1.762;DP=403;FS=0.000;HRun=0;HaplotypeScore=73.0746;InbreedingCoeff=0.2127;MQ=54.52;MQ0=38;MQRankSum=-0.007;QD=2.43;ReadPosRankSum=4.246;VQSLOD=1.0653;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:19:25.40:323,25,0	0/0:4,0:4:3.01:0,3,33	0/0:25,0:11:23.74:0,24,257	0/0:46,0:14:28.28:0,28,267	1/1:9,14:19:2.52:46,3,0	0/0:23,0:21:14.54:0,15,73	1/1:24,0:23:4.78:30,5,0	0/0:19,0:18:25.45:0,25,242	1/1:8,0:8:1.55:4,2,0	1/1:7,0:5:4.93:44,5,0	0/0:5,0:5:2.99:0,3,24	0/1:12,0:12:5.13:5,0,50	0/1:6,0:6:2.17:10,0,2	0/0:9,0:7:12.92:0,13,104	0/0:11,0:9:10.25:0,10,87	0/1:16,0:16:9.34:9,0,254	0/0:19,0:18:20.69:0,21,339	0/1:13,0:13:52:52,0,71	0/1:6,0:3:1.68:2,0,27	0/0:7,0:6:2.84:0,3,9	0/1:16,0:14:15.54:16,0,26	0/0:16,0:16:5.86:0,6,41	0/1:15,0:14:3.70:53,0,4	0/1:17,0:18:21.73:22,0,22	0/0:7,0:7:9.44:0,9,72	0/0:5,0:5:9.46:0,9,77	0/0:13,0:12:8.26:0,8,45	0/0:3,0:2:2.56:0,3,21
chr10	58541393	.	CTCTCT	C	675.06	PASS	AB=0.943;AC=21;AF=0.375;AN=56;BaseQRankSum=-1.342;DP=379;FS=33.314;HRun=0;HaplotypeScore=78.5838;InbreedingCoeff=0.0229;MQ=53.32;MQ0=40;MQRankSum=0.411;QD=3.97;ReadPosRankSum=-0.367;VQSLOD=-0.0664;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:18:8.52:0,9,86	0/0:2,0:2:2.99:0,3,24	0/0:23,0:9:21.02:0,21,304	0/0:45,0:14:26.75:0,27,269	0/0:21,0:18:2.65:0,3,17	0/0:21,0:19:27.77:0,28,231	1/1:23,0:23:4.94:83,5,0	0/0:15,0:14:7.08:0,7,393	1/1:1,0:7:2.74:31,3,0	1/1:3,3:4:8:98,8,0	1/1:5,0:5:0.89:2,1,0	0/1:13,0:12:26.88:27,0,64	1/1:6,0:6:17.96:168,18,0	0/1:8,0:7:15.96:16,0,53	0/1:6,1:6:15.57:16,0,18	0/1:14,0:14:3.16:3,0,316	0/0:14,0:13:17.96:0,18,390	0/1:13,1:14:99:154,0,182	0/1:4,2:3:16.46:24,0,16	0/0:7,0:6:6.45:0,6,52	0/1:14,0:14:15.17:68,0,15	0/0:15,0:16:12.32:0,12,96	0/1:15,0:14:27.08:79,0,27	0/1:18,0:17:43.18:43,0,49	0/1:7,0:7:15.42:23,0,15	0/0:5,0:5:5.78:0,6,34	0/0:6,7:12:12.02:0,12,134	0/1:3,0:2:0.22:0,0,24
chr10	58541413	.	CTG	C	288.03	PASS	AB=0.981;AC=9;AF=0.173;AN=52;BaseQRankSum=-5.276;DP=439;FS=2.777;HRun=0;HaplotypeScore=99.3860;InbreedingCoeff=0.4892;MQ=43.17;MQ0=36;MQRankSum=1.675;QD=2.69;ReadPosRankSum=-1.605;VQSLOD=1.8767;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:22:58.52:59,0,71	1/1:2,0:2:2.79:24,3,0	./.	./.	0/1:26,0:24:11.53:12,0,109	0/0:25,0:23:26.63:0,27,226	0/0:28,0:27:9.21:0,9,73	1/1:16,3:18:8.85:62,9,0	0/0:12,0:10:11.95:0,12,92	0/0:14,0:13:26.85:0,27,172	0/0:6,0:6:8.93:0,9,66	0/0:21,0:20:23.76:0,24,238	0/0:9,0:9:6.39:0,6,42	0/0:8,0:7:6.02:0,6,75	0/0:11,0:8:8.98:0,9,73	0/1:16,1:16:0.02:150,0,0	1/1:17,0:15:14.62:120,15,0	0/0:13,0:13:18.02:0,18,200	0/0:11,0:8:8.95:0,9,67	0/0:10,0:9:11.99:0,12,105	0/0:18,0:15:11.90:0,12,89	0/0:20,0:19:29.25:0,29,254	0/0:18,0:17:14.93:0,15,121	0/0:30,0:29:14.98:0,15,145	0/0:13,0:13:14.98:0,15,138	0/0:10,0:10:26.71:0,27,200	0/0:20,0:19:26.85:0,27,250	0/0:9,0:8:8.47:0,8,76
chr10	58543915	.	TCA	T	1966.44	PASS	AB=0.847;AC=14;AF=0.250;AN=56;BaseQRankSum=2.475;DP=673;FS=5.206;HRun=0;HaplotypeScore=119.8837;InbreedingCoeff=0.5769;MQ=64.24;MQ0=5;MQRankSum=4.571;QD=11.43;ReadPosRankSum=2.853;VQSLOD=3.3233;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:8.48:0,8,74	0/1:11,0:12:6.31:6,0,288	0/0:31,0:22:6.02:0,6,83	0/0:35,0:24:9.03:0,9,130	0/0:24,0:31:3.01:0,3,43	0/1:14,9:25:21.66:171,0,22	1/1:15,13:28:32.92:348,33,0	0/0:22,0:22:18.09:0,18,221	0/0:23,0:34:23.84:0,24,186	0/0:33,0:32:42.18:0,42,392	0/0:20,0:18:8.96:0,9,81	1/1:11,11:22:12.14:341,12,0	0/0:17,0:21:8.98:0,9,84	0/0:11,0:20:3.01:0,3,40	0/0:20,0:27:9.02:0,9,101	0/0:38,0:38:75.24:0,75,1109	0/0:32,0:35:31.91:0,32,780	1/1:7,10:16:30.08:334,30,0	0/0:22,0:21:14.33:0,14,87	0/0:22,0:22:10.58:0,11,116	0/0:35,0:35:31.31:0,31,228	1/1:14,12:26:2.13:242,2,0	1/1:7,14:20:33.09:367,33,0	1/1:10,11:21:29.97:331,30,0	0/0:14,0:21:2.83:0,3,43	0/0:12,0:12:22.41:0,22,188	0/0:11,0:11:2.97:0,3,20	0/0:5,0:4:2.97:0,3,20
chr10	58547449	.	G	GA	1991.42	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-7.264;DP=554;FS=2.352;HRun=6;HaplotypeScore=58.4242;InbreedingCoeff=0.9865;MQ=80.31;MQ0=0;MQRankSum=-3.631;QD=32.12;ReadPosRankSum=1.047;VQSLOD=4.0608;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,24:26:69.22:868,69,0	0/0:13,0:13:33.07:0,33,337	0/0:16,0:16:13.16:0,13,234	0/0:16,0:16:36.78:0,37,375	1/1:2,34:36:99:1245,102,0	0/0:18,0:18:42.05:0,42,412	0/0:15,0:15:33.07:0,33,337	0/0:26,0:26:69.12:0,69,686	0/0:9,0:9:27.06:0,27,275	0/0:32,0:32:93.20:0,93,944	0/0:21,0:21:54.01:0,54,521	0/0:19,0:19:54.12:0,54,551	0/0:13,0:13:33.07:0,33,336	0/0:14,0:14:42.09:0,42,423	0/0:22,0:22:63.13:0,63,635	0/0:18,0:18:54.12:0,54,551	0/0:11,0:11:33.08:0,33,337	0/0:16,0:16:45.10:0,45,459	0/0:20,0:20:57.11:0,57,570	0/0:31,0:31:69.15:0,69,703	0/0:22,0:22:60.11:0,60,604	0/0:16,0:16:45.10:0,45,459	0/0:15,0:15:42.07:0,42,415	0/0:13,0:13:36.08:0,36,367	0/0:17,0:17:42.09:0,42,428	0/0:29,0:29:78.16:0,78,784	0/0:24,0:23:69.16:0,69,704	0/0:26,0:26:78.18:0,78,796
chr10	58547855	.	A	AT	2626.70	PASS	AB=0.988;AC=24;AF=0.429;AN=56;BaseQRankSum=8.618;DP=657;FS=51.333;HRun=1;HaplotypeScore=646.5371;InbreedingCoeff=-0.4819;MQ=64.59;MQ0=0;MQRankSum=-10.884;QD=4.99;ReadPosRankSum=1.414;VQSLOD=0.5704;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:18,0:18:42.57:81,0,43	0/0:11,0:11:33.11:0,33,428	0/0:16,0:16:40.95:0,41,454	0/0:15,0:15:42.12:0,42,515	0/1:55,0:55:99:314,0,153	0/1:18,2:20:50.33:50,0,113	0/1:14,0:14:52.69:53,0,53	0/0:37,0:37:99:0,105,1309	0/1:24,2:26:74.37:151,0,74	0/1:37,0:37:77.02:77,0,256	0/1:44,0:44:99:179,0,204	0/1:21,2:23:96.49:96,0,111	0/1:21,0:21:44.45:104,0,44	0/1:12,0:12:52.44:52,0,72	1/1:12,0:12:4:76,4,0	0/0:23,0:23:69.22:0,69,896	0/0:29,0:29:84.27:0,84,1090	1/1:9,0:9:14.48:93,14,0	0/1:9,0:9:19.13:19,0,97	0/1:46,0:46:99:272,0,281	0/1:10,0:10:14.89:15,0,42	0/1:31,0:31:99:147,0,141	0/1:38,0:38:99:343,0,108	0/1:7,0:7:15.58:64,0,16	0/1:33,0:33:99:214,0,132	0/1:17,0:17:86.99:87,0,92	0/1:25,0:25:46.04:187,0,46	0/1:19,0:19:66.43:119,0,66
chr10	58548311	.	CT	C	1240.01	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.003;DP=583;FS=7.641;HRun=8;HaplotypeScore=56.9322;InbreedingCoeff=0.9851;MQ=87.78;MQ0=0;MQRankSum=-4.815;QD=21.75;ReadPosRankSum=1.621;VQSLOD=4.0370;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,20:23:57.09:550,57,0	0/0:7,0:7:18.06:0,18,217	0/0:25,0:25:60.14:0,60,669	0/0:21,0:20:15.17:0,15,405	1/1:4,30:34:84.12:811,84,0	0/0:29,0:29:75.23:0,75,906	0/0:14,0:14:39.12:0,39,471	0/0:36,0:36:84.25:0,84,1004	0/0:19,0:19:57.17:0,57,689	0/0:32,0:32:84.26:0,84,1015	0/0:20,0:20:57.17:0,57,689	0/0:23,0:23:69.21:0,69,833	0/0:14,0:14:42.12:0,42,497	0/0:21,0:21:60.18:0,60,724	0/0:18,0:18:48.13:0,48,568	0/0:14,0:14:39.12:0,39,471	0/0:21,0:21:63.19:0,63,761	0/0:11,0:11:30.09:0,30,362	0/0:20,0:20:51.16:0,51,616	0/0:35,0:35:93.27:0,93,1112	0/0:15,0:15:42.13:0,42,507	0/0:20,0:20:57.16:0,57,669	0/0:24,0:24:66.20:0,66,797	0/0:9,0:9:21.06:0,21,254	0/0:17,0:17:48.15:0,48,580	0/0:24,0:24:66.20:0,66,797	0/0:28,0:27:78.24:0,78,942	0/0:9,0:9:27.08:0,27,326
chr10	58549489	.	G	GT	2940.58	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-9.276;DP=579;FS=2.382;HRun=10;HaplotypeScore=69.4436;InbreedingCoeff=0.9907;MQ=76.51;MQ0=0;MQRankSum=-0.742;QD=22.45;ReadPosRankSum=0.961;VQSLOD=4.6164;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,102,835	0/0:13,0:13:26.94:0,27,222	0/0:18,0:19:34.21:0,34,254	0/0:17,0:18:29.68:0,30,225	0/0:30,0:32:76.90:0,77,618	1/1:2,21:24:53.97:558,54,0	1/1:3,8:11:24.06:256,24,0	0/0:24,0:24:56.90:0,57,463	0/0:26,0:26:71.90:0,72,588	0/0:19,1:20:18.92:0,19,360	0/0:23,1:24:18.92:0,19,362	1/1:2,11:13:30.07:320,30,0	0/0:18,0:18:53.91:0,54,439	0/0:24,0:24:59.93:0,60,493	0/0:13,0:13:35.94:0,36,293	0/0:18,0:18:44.95:0,45,369	0/0:23,0:23:59.90:0,60,488	1/1:7,19:27:54.14:575,54,0	0/0:21,0:21:44.90:0,45,367	0/0:24,0:24:56.90:0,57,468	0/0:5,0:5:11.98:0,12,98	1/1:2,16:18:26.31:474,26,0	1/1:0,18:18:45.11:480,45,0	1/1:2,16:20:47.79:476,48,0	0/0:25,1:26:33.93:0,34,485	0/0:28,0:28:68.88:0,69,564	0/0:19,0:20:52.93:0,53,416	0/0:13,0:13:26.93:0,27,221
chr10	58550570	.	A	ATC	3680.11	PASS	AB=0.860;AC=25;AF=0.481;AN=52;BaseQRankSum=-2.636;DP=445;FS=4.453;HRun=0;HaplotypeScore=106.2393;InbreedingCoeff=0.8013;MQ=63.85;MQ0=4;MQRankSum=-0.962;QD=20.00;ReadPosRankSum=1.472;VQSLOD=3.9058;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:17.83:0,18,402	0/0:12,0:12:18.03:0,18,182	0/0:31,0:20:37.60:0,38,447	0/0:31,0:20:38.49:0,38,460	0/0:26,0:26:32.97:0,33,362	0/0:4,0:17:14.20:0,14,70	0/0:3,0:9:8.52:0,9,43	0/0:37,0:37:87.23:0,87,1043	1/1:0,10:10:15.01:200,15,0	1/1:6,9:14:33.58:534,34,0	1/1:4,13:16:11.79:199,12,0	0/0:3,0:14:20:0,20,97	1/1:4,4:8:8.90:145,9,0	1/1:3,5:8:3.01:48,3,0	1/1:1,9:9:12.03:181,12,0	0/0:13,0:13:33.10:0,33,408	0/0:16,0:16:27:0,27,304	0/0:5,0:8:14.24:0,14,71	1/1:6,8:14:30.06:440,30,0	1/1:6,16:21:29.06:390,29,0	./.	0/1:2,0:7:0.10:0,0,0	0/1:2,0:9:0:1,0,0	./.	1/1:4,17:21:20.56:334,21,0	1/1:6,16:22:54.18:883,54,0	1/1:1,9:10:15.05:234,15,0	0/1:3,8:11:28.83:90,0,29
chr10	58550585	.	C	CTGTGTGTGTGTG	6556.74	PASS	AB=0.819;AC=46;AF=0.852;AN=54;BaseQRankSum=-3.953;DP=509;FS=3.855;HRun=0;HaplotypeScore=184.9857;InbreedingCoeff=0.3928;MQ=51.62;MQ0=6;MQRankSum=-3.645;QD=15.32;ReadPosRankSum=-0.195;VQSLOD=3.9589;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:35,0:34:17.61:337,18,0	1/1:2,0:11:10.76:176,11,0	./.	0/0:30,0:17:5.60:0,6,38	0/1:13,14:30:1.33:170,0,1	1/1:16,0:16:6.02:196,6,0	1/1:15,0:14:6:90,6,0	1/1:38,0:38:32.68:392,33,0	1/1:15,0:15:6.45:153,6,0	1/1:22,0:20:35.96:969,36,0	1/1:17,0:16:2.99:23,3,0	1/1:14,7:22:15.05:658,15,0	1/1:7,0:6:5.90:37,6,0	1/1:12,0:11:2.88:20,3,0	1/1:12,0:11:3.01:48,3,0	0/0:2,0:16:14.22:0,14,74	1/1:10,0:16:2.57:108,3,0	1/1:6,0:13:15.03:551,15,0	1/1:11,0:11:8.95:143,9,0	1/1:27,0:24:3.01:88,3,0	0/0:9,0:9:1.77:0,2,4	0/1:10,0:10:0:0,0,0	1/1:12,0:12:2.75:24,3,0	1/1:14,0:14:6:179,6,0	1/1:15,0:17:12.01:363,12,0	1/1:27,0:27:50.82:1296,51,0	1/1:14,0:14:8.83:190,9,0	1/1:13,0:12:14.93:347,15,0
chr10	58551497	.	C	CATATAT	4605.50	PASS	AC=24;AF=0.444;AN=54;BaseQRankSum=4.499;DP=584;FS=3.956;HRun=0;HaplotypeScore=169.6470;InbreedingCoeff=0.8796;MQ=59.56;MQ0=2;MQRankSum=-6.282;QD=22.47;ReadPosRankSum=-1.440;VQSLOD=4.4647;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:75.46:0,75,895	0/0:9,0:9:27.06:0,27,513	0/0:15,0:13:26.67:0,27,407	0/0:19,0:14:32.10:0,32,400	0/0:31,0:31:68.69:0,69,789	0/0:24,0:24:48.14:0,48,742	0/0:22,0:22:47.86:0,48,695	0/0:33,0:33:75.10:0,75,1228	1/1:19,0:19:12.04:343,12,0	1/1:26,0:25:48.10:1054,48,0	1/1:12,0:12:3.01:86,3,0	0/0:21,0:21:48.15:0,48,806	1/1:16,0:16:15.05:436,15,0	./.	1/1:6,0:6:3.01:88,3,0	0/0:20,0:20:54.16:0,54,1127	0/0:35,0:35:90.10:0,90,1761	0/0:24,0:24:54.13:0,54,848	1/1:9,1:8:20.85:290,21,0	1/1:25,0:25:6.02:173,6,0	1/1:1,11:12:2.25:77,2,0	0/0:34,0:34:75.15:0,75,1260	0/0:29,0:29:66.20:0,66,1111	0/0:18,0:18:34.06:0,34,554	1/1:24,0:24:24.08:636,24,0	1/1:24,0:24:33.07:854,33,0	1/1:23,0:23:14.90:397,15,0	1/1:8,0:8:6.02:173,6,0
chr10	58551500	.	ATGTG	A	5306.48	PASS	AB=1.000;AC=15;AF=0.278;AN=54;BaseQRankSum=-0.107;DP=683;FS=0.418;HRun=0;HaplotypeScore=167.4471;InbreedingCoeff=0.8750;MQ=56.63;MQ0=2;MQRankSum=3.091;QD=29.98;ReadPosRankSum=5.810;VQSLOD=4.7715;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:39:69.05:0,69,1229	0/0:9,0:9:18.06:0,18,457	0/0:16,0:13:26.28:0,26,434	0/0:21,0:15:17.73:0,18,570	0/0:6,0:26:60.18:0,60,993	1/1:3,18:21:39.13:678,39,0	1/1:0,19:19:48.12:802,48,0	0/0:31,0:31:66.22:0,66,1620	0/0:6,0:24:14.89:0,15,225	0/0:14,0:36:57.17:0,57,914	0/0:13,0:26:3.01:0,3,52	1/1:4,17:21:39.13:678,39,0	0/0:3,0:18:15.05:0,15,242	./.	0/0:14,0:19:3.01:0,3,35	0/0:21,0:21:60.21:0,60,1512	0/0:33,0:33:78.25:0,78,1895	1/1:3,22:25:44.98:718,45,0	0/0:14,0:12:30.42:0,30,383	0/0:13,0:37:15.05:0,15,268	0/1:9,0:9:0.02:0,0,0	1/1:2,32:34:72.15:1186,72,0	1/1:6,23:29:50.96:725,51,0	1/1:1,18:19:11.81:519,12,0	0/0:11,0:33:21.57:0,22,314	0/0:13,0:37:66.10:0,66,1056	0/0:9,0:35:29.84:0,30,458	0/0:1,0:7:6.02:0,6,104
chr10	58556537	.	A	AT	3841.06	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-14.069;DP=650;FS=3.448;HRun=7;HaplotypeScore=97.3162;InbreedingCoeff=0.9909;MQ=77.58;MQ0=0;MQRankSum=-2.059;QD=30.48;ReadPosRankSum=2.672;VQSLOD=3.2860;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,105,1009	0/0:4,0:4:12.02:0,12,116	0/0:31,0:26:16.22:0,16,322	0/0:27,0:20:23.48:0,23,189	0/0:43,0:43:99:0,120,1145	1/1:2,25:27:63.19:761,63,0	1/1:1,13:14:33.10:399,33,0	0/0:30,0:30:75.08:0,75,706	0/0:16,0:16:42.05:0,42,400	0/0:34,0:34:72.05:0,72,678	0/0:39,0:39:99:0,111,1059	1/1:0,14:14:36.11:435,36,0	0/0:21,0:21:57.07:0,57,541	0/0:8,0:8:24.04:0,24,231	0/0:18,0:18:47.94:0,48,449	0/0:16,0:16:33.05:0,33,319	0/0:19,0:19:51.07:0,51,488	1/1:2,10:12:27.08:326,27,0	0/0:24,0:24:48.05:0,48,463	0/0:29,0:29:75.11:0,75,720	0/0:16,0:16:39.04:0,39,367	1/1:0,26:26:78.24:942,78,0	1/1:2,19:21:54.17:652,54,0	1/1:3,9:12:27.08:326,27,0	0/0:31,0:31:84.12:0,84,806	0/0:33,0:33:84.11:0,84,801	0/0:30,0:30:84.10:0,84,800	0/0:13,0:13:39.06:0,39,377
chr10	58557167	.	TG	T	7327.52	PASS	AC=52;AF=1.000;AN=52;BaseQRankSum=2.601;DP=404;FS=9.202;HRun=2;HaplotypeScore=427.7703;InbreedingCoeff=0.0200;MQ=29.25;MQ0=0;MQRankSum=-2.987;QD=18.14;ReadPosRankSum=2.966;VQSLOD=1.7356;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,16:16:41.45:271,41,0	1/1:0,9:9:26.62:172,27,0	./.	./.	1/1:0,20:19:50.27:328,50,0	1/1:0,27:27:77.12:515,77,0	1/1:0,7:7:20.76:138,21,0	1/1:0,19:19:56.32:378,56,0	1/1:1,14:15:32.80:253,33,0	1/1:1,20:21:44.50:368,44,0	1/1:0,20:20:47.15:303,47,0	1/1:0,15:15:44.42:292,44,0	1/1:0,15:15:44.33:287,44,0	1/1:0,15:15:44.35:287,44,0	1/1:0,14:14:41.32:266,41,0	1/1:0,20:20:59.22:386,59,0	1/1:0,4:4:8.88:58,9,0	1/1:0,1:1:2.97:20,3,0	1/1:0,12:12:32.63:222,33,0	1/1:0,23:23:68.26:462,68,0	1/1:0,8:8:20.39:124,20,0	1/1:0,19:19:50.09:318,50,0	1/1:0,21:21:62.11:408,62,0	1/1:0,19:19:44.32:287,44,0	1/1:0,18:18:53.24:348,53,0	1/1:1,15:16:47.30:311,47,0	1/1:2,21:23:55.24:396,55,0	1/1:0,7:7:20.69:132,21,0
chr10	58557331	.	A	AC	11985.27	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=8.393;DP=673;FS=0.600;HRun=1;HaplotypeScore=91.6463;InbreedingCoeff=0.9999;MQ=82.76;MQ0=1;MQRankSum=-3.749;QD=40.22;ReadPosRankSum=5.086;VQSLOD=5.0061;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:57:99:0,159,2006	0/0:13,0:13:39.13:0,39,506	0/0:23,0:23:66.19:0,66,828	0/0:23,0:23:56.99:0,57,725	0/0:16,0:16:45.02:0,45,542	0/0:26,0:26:75.14:0,75,932	0/0:17,0:17:48.08:0,48,587	0/0:29,0:29:84.21:0,84,1036	1/1:1,23:24:30.29:948,30,0	1/1:0,25:25:72.24:1079,72,0	1/1:0,14:14:39.13:584,39,0	0/0:25,0:25:75.14:0,75,933	1/1:0,18:18:51.17:763,51,0	1/1:2,16:18:48.16:717,48,0	1/1:2,24:26:66.22:984,66,0	0/0:19,0:19:57.13:0,57,717	0/0:26,0:26:75.24:0,75,970	0/0:25,0:25:69.19:0,69,877	1/1:1,15:16:48.16:717,48,0	1/1:0,41:41:99:1768,120,0	1/1:0,18:18:45.15:674,45,0	0/0:26,0:26:78.24:0,78,998	0/0:29,0:29:87.27:0,87,1117	0/0:21,0:20:54.18:0,54,701	1/1:1,20:21:54.18:809,54,0	1/1:1,25:26:75.24:1103,75,0	1/1:4,29:33:69.23:1031,69,0	1/1:0,18:18:54.18:807,54,0
chr10	58560217	.	T	TCCAC	3652.74	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-3.849;DP=654;FS=0.000;HRun=0;HaplotypeScore=142.7503;InbreedingCoeff=0.9943;MQ=86.05;MQ0=0;MQRankSum=-4.653;QD=55.34;ReadPosRankSum=1.401;VQSLOD=4.9965;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,25:35:84.24:2145,84,0	0/0:9,0:9:27.09:0,27,498	0/0:36,0:36:90.29:0,90,1576	0/0:33,0:33:90.31:0,90,1708	1/1:3,22:31:57.20:1508,57,0	0/0:17,0:17:51.17:0,51,967	0/0:21,0:21:63.20:0,63,1148	0/0:24,0:24:66.21:0,66,1189	0/0:20,0:20:57.20:0,57,1081	0/0:16,0:16:45.15:0,45,820	0/0:14,0:14:42.13:0,42,765	0/0:16,0:16:45.15:0,45,844	0/0:20,0:20:57.19:0,57,1075	0/0:26,0:26:75.24:0,75,1380	0/0:31,0:31:93.30:0,93,1711	0/0:28,0:28:81.28:0,81,1537	0/0:27,0:27:75.22:0,75,1367	0/0:10,0:10:24.06:0,24,409	0/0:20,0:20:57.14:0,57,956	0/0:30,0:30:87.28:0,87,1618	0/0:26,0:26:72.21:0,72,1261	0/0:19,0:19:57.20:0,57,1082	0/0:33,0:33:99:0,99,1770	0/0:28,0:28:78.25:0,78,1437	0/0:26,0:26:75.24:0,75,1390	0/0:31,0:31:81.27:0,81,1502	0/0:21,0:20:57.19:0,57,1046	0/0:6,0:6:18.04:0,18,308
chr10	58560366	.	T	TA	1291.62	PASS	AB=0.811;AC=13;AF=0.232;AN=56;BaseQRankSum=11.856;DP=851;FS=20.910;HRun=0;HaplotypeScore=200.3779;InbreedingCoeff=-0.3020;MQ=59.78;MQ0=11;MQRankSum=-3.634;QD=3.42;ReadPosRankSum=-2.665;VQSLOD=1.2849;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:87.24:0,87,1172	0/0:12,0:13:36.07:0,36,494	0/0:59,0:39:99:0,111,1507	0/0:83,0:66:98.27:0,98,1528	0/0:29,0:29:81.27:0,81,1134	0/0:13,0:13:36.12:0,36,503	0/0:31,0:31:90.21:0,90,1219	0/0:30,0:30:87.29:0,87,1217	0/1:20,3:22:84.28:84,0,340	0/1:33,10:42:99:216,0,1098	0/1:19,4:22:69.61:70,0,411	0/0:23,0:21:48.11:0,48,634	0/1:17,3:20:19.32:19,0,466	0/1:21,6:27:44.38:44,0,426	0/1:27,11:36:99:152,0,497	0/0:26,0:25:72.24:0,72,1003	0/0:32,0:33:49.43:0,49,1177	0/0:21,0:19:57.16:0,57,776	0/1:19,6:24:99:126,0,497	0/1:24,8:31:99:192,0,422	0/1:29,11:40:95.99:96,0,666	0/0:20,0:20:54.18:0,54,755	0/0:20,0:20:60.19:0,60,823	0/0:34,0:34:76.05:0,76,968	0/1:19,4:22:31.33:31,0,304	0/1:39,10:48:99:199,0,1194	0/1:17,5:22:99:115,0,334	0/1:6,7:13:99:100,0,174
chr10	58560368	.	GGTC	G	1466	PASS	AB=0.810;AC=13;AF=0.232;AN=56;BaseQRankSum=11.461;DP=851;FS=20.954;HRun=0;HaplotypeScore=227.3022;InbreedingCoeff=-0.3023;MQ=60.04;MQ0=12;MQRankSum=-4.932;QD=3.93;ReadPosRankSum=-1.487;VQSLOD=0.7315;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:93.19:0,93,1882	0/0:13,0:13:36.09:0,36,838	0/0:59,0:37:99:0,105,2320	0/0:91,1:68:99:0,130,2675	0/0:29,0:29:84.28:0,84,1892	0/0:13,0:13:36.12:0,36,868	0/0:32,0:32:94.78:0,95,2074	0/0:31,0:31:93.31:0,93,2097	0/1:20,3:22:75.79:76,0,732	0/1:32,10:41:99:236,0,2020	0/1:19,4:22:47.38:47,0,817	0/0:22,0:20:48.16:0,48,1103	0/1:19,3:22:29.20:29,0,901	0/1:21,6:27:68.55:69,0,862	0/1:26,11:35:99:176,0,960	0/0:25,0:24:72.25:0,72,1735	0/0:31,0:31:51.84:0,52,1941	0/0:21,0:19:57.16:0,57,1329	0/1:17,6:22:99:122,0,761	0/1:21,8:28:99:211,0,892	0/1:29,11:40:99:130,0,1365	0/0:20,0:20:57.19:0,57,1326	0/0:19,0:19:57.19:0,57,1323	0/0:36,0:36:65.81:0,66,1461	0/1:19,4:22:29.60:30,0,699	0/1:38,10:47:99:207,0,2195	0/1:18,5:23:99:139,0,635	0/1:6,7:13:99:149,0,324
chr10	58560404	.	TTCTCTCTCTCTCTCTCTC	T	4121.04	PASS	AB=0.882;AC=22;AF=0.407;AN=54;BaseQRankSum=2.906;DP=723;FS=3.964;HRun=0;HaplotypeScore=300.9500;InbreedingCoeff=0.2573;MQ=53.18;MQ0=48;MQRankSum=-3.387;QD=12.56;ReadPosRankSum=0.594;VQSLOD=2.1928;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:31:11.33:0,11,195	0/0:10,0:8:9.44:0,9,165	./.	0/0:76,0:31:1.52:0,2,3	0/0:27,0:26:26.58:0,27,698	0/1:9,0:13:50.48:90,0,50	0/0:22,0:20:6.41:0,6,114	0/0:38,0:35:25.56:0,26,469	0/1:17,0:16:99:126,0,110	0/1:22,1:22:10.95:359,0,11	0/0:14,6:19:0:0,0,1	1/1:16,1:23:9.04:706,9,0	0/1:14,0:20:20.05:339,0,20	0/1:19,2:22:55.63:295,0,56	0/0:18,7:23:2.37:0,2,8	0/0:19,0:19:21.06:0,21,781	0/0:29,0:25:45.09:0,45,1716	0/1:20,0:16:28.33:163,0,28	0/1:21,0:20:0.81:77,0,1	1/1:24,0:21:8.55:89,9,0	1/1:33,0:31:2.85:10,3,0	0/0:13,0:21:14.55:0,15,224	0/0:14,0:19:11.31:0,11,107	0/1:20,9:28:48.97:55,0,49	1/1:16,1:16:14.82:285,15,0	1/1:27,2:27:6.74:678,7,0	1/1:12,6:19:21.03:718,21,0	1/1:10,0:8:6:130,6,0
chr10	58560450	.	CTCTCTCCCT	C	485.77	PASS	AB=0.952;AC=9;AF=0.161;AN=56;BaseQRankSum=7.901;DP=563;FS=23.649;HRun=0;HaplotypeScore=158.9410;InbreedingCoeff=0.0695;MQ=60.16;MQ0=60;MQRankSum=-5.262;QD=2.87;ReadPosRankSum=3.657;VQSLOD=1.3335;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:18,18:24:22.51:60,0,23	0/0:5,0:5:9.83:0,10,144	0/0:35,0:13:18.79:0,19,507	0/0:33,0:17:39.11:0,39,568	1/1:23,1:13:10.36:271,10,0	0/0:15,0:15:15.40:0,15,644	0/0:18,0:17:29.16:0,29,690	0/0:28,0:28:71.36:0,71,1150	0/0:15,0:14:35.27:0,35,540	0/1:13,0:12:6.33:6,0,435	0/0:16,0:15:27.06:0,27,445	0/1:26,0:22:99:162,0,578	0/1:14,0:14:52.55:53,0,410	0/1:21,0:18:18.09:18,0,544	0/0:19,0:18:39.13:0,39,705	0/0:13,0:12:33.11:0,33,662	0/0:25,0:22:53.21:0,53,1305	0/0:23,0:19:35.97:0,36,739	0/0:9,0:8:23.27:0,23,334	0/0:15,0:13:23.57:0,24,452	0/0:22,0:21:25.44:0,25,594	0/0:24,0:23:47.85:0,48,804	0/0:19,0:18:39.09:0,39,721	0/0:32,0:29:30.59:0,31,652	0/1:11,0:10:1.63:2,0,460	0/0:22,0:20:12.37:0,12,859	0/1:24,0:21:49.77:50,0,704	0/0:6,0:3:8.39:0,8,122
chr10	58561747	.	T	TACAC	3036.54	PASS	AB=0.818;AC=45;AF=0.900;AN=50;BaseQRankSum=-0.704;DP=522;FS=5.637;HRun=0;HaplotypeScore=112.1812;InbreedingCoeff=0.0904;MQ=72.06;MQ0=9;MQRankSum=-0.517;QD=7.00;ReadPosRankSum=-0.916;VQSLOD=2.0817;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:36,0:32:2.07:29,2,0	1/1:4,0:4:2.90:16,3,0	./.	./.	1/1:20,0:19:12.46:181,12,0	0/1:8,1:19:18.98:63,0,19	1/1:26,0:23:9.55:114,10,0	./.	1/1:8,6:17:9.03:203,9,0	1/1:13,0:17:23.81:303,24,0	1/1:11,0:11:4.96:19,5,0	1/1:9,1:18:12.03:215,12,0	1/1:6,4:12:12.51:282,13,0	1/1:7,7:17:11.78:222,12,0	1/1:6,6:13:6.48:124,6,0	0/0:11,0:11:15.04:0,15,211	1/1:14,0:28:11.20:56,11,0	1/1:5,0:10:2.74:12,3,0	1/1:13,0:13:3.01:40,3,0	1/1:13,5:19:7.27:126,7,0	0/1:24,6:31:84.88:100,0,85	1/1:11,0:17:5.49:62,5,0	1/1:20,0:19:2.71:65,3,0	1/1:22,0:21:8.70:150,9,0	1/1:8,6:15:6.02:140,6,0	1/1:14,2:16:19.26:322,19,0	1/1:12,4:22:12.50:233,12,0	0/1:8,0:7:12.03:81,0,12
chr10	58562258	.	ATATTTATT	A	921.04	PASS	AC=14;AF=0.583;AN=24;BaseQRankSum=0.819;DP=231;FS=2.663;HRun=0;HaplotypeScore=48.8362;InbreedingCoeff=0.3876;MQ=42.04;MQ0=32;MQRankSum=-1.323;QD=11.51;ReadPosRankSum=-0.315;VQSLOD=0.8815;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:8,0:6:3.01:56,3,0	0/0:6,0:6:3.01:0,3,41	./.	./.	0/0:19,0:15:0.47:0,0,1	./.	./.	./.	1/1:6,1:6:3.01:70,3,0	1/1:10,2:11:6.02:147,6,0	./.	./.	./.	./.	./.	0/0:8,0:8:3.01:0,3,121	./.	./.	./.	1/1:7,3:10:6.02:147,6,0	./.	0/0:6,0:6:0:0,0,0	0/0:4,0:4:0:0,0,0	./.	1/1:7,7:14:12.04:295,12,0	./.	1/1:9,4:12:2.55:73,3,0	1/1:13,3:13:9.03:221,9,0
chr10	58562264	.	ATTTATTTATTTATT	A	82.92	PASS	AB=1.000;AC=5;AF=0.104;AN=48;BaseQRankSum=1.381;DP=194;FS=2.991;HRun=0;HaplotypeScore=52.5034;InbreedingCoeff=0.3665;MQ=39.90;MQ0=28;MQRankSum=-0.015;QD=3.07;ReadPosRankSum=1.826;VQSLOD=0.9407;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,6:5:3.01:129,3,0	0/0:4,0:4:12.04:0,12,326	./.	0/0:3,0:3:6.02:0,6,79	1/1:2,14:14:1.05:42,1,0	./.	0/0:4,0:3:9.03:0,9,137	0/0:23,0:13:39.13:0,39,581	0/0:5,0:4:3.01:0,3,40	0/0:11,0:10:30.07:0,30,378	0/0:6,0:6:3.01:0,3,36	0/0:8,0:8:6.02:0,6,85	0/0:1,0:1:2.97:0,3,20	0/1:2,0:2:0:0,0,0	0/0:3,0:2:3.01:0,3,78	0/0:5,0:5:3.01:0,3,213	0/0:5,0:2:3.01:0,3,146	0/0:3,0:3:5.98:0,6,74	0/0:12,0:7:17.27:0,17,221	0/0:7,0:7:18.06:0,18,332	./.	0/0:3,0:3:0.47:0,0,1	0/0:3,0:3:0.47:0,0,1	./.	0/0:14,0:14:21.07:0,21,272	0/0:8,0:8:24.06:0,24,324	0/0:11,0:11:13.02:0,13,303	0/0:13,0:12:18.06:0,18,234
chr10	58564367	.	T	TC	3729.36	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=19.351;DP=647;FS=0.951;HRun=1;HaplotypeScore=145.6955;InbreedingCoeff=0.9997;MQ=83.22;MQ0=0;MQRankSum=-7.508;QD=13.27;ReadPosRankSum=3.669;VQSLOD=3.0422;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,123,1580	0/0:14,0:14:42.14:0,42,545	0/0:22,0:22:59.23:0,59,682	0/0:31,0:29:76.73:0,77,963	0/0:27,0:27:75.20:0,75,943	0/0:19,0:19:57.17:0,57,724	0/0:22,0:22:66.21:0,66,857	0/0:28,0:28:84.27:0,84,1080	1/1:18,1:19:53.94:293,54,0	1/1:23,1:24:64.57:348,65,0	1/1:14,0:14:30.80:180,31,0	0/0:20,0:20:57.17:0,57,726	1/1:20,0:20:54.16:259,54,0	1/1:20,0:20:54.23:259,54,0	1/1:20,1:21:52.72:283,53,0	0/0:16,0:16:28.09:0,28,528	0/0:31,0:31:93.30:0,93,1206	0/0:20,0:20:60.19:0,60,777	1/1:18,0:18:48.47:282,48,0	1/1:26,0:26:46.96:260,47,0	1/1:35,0:35:62.60:340,63,0	0/0:19,0:19:57.19:0,57,740	0/0:25,0:25:72.23:0,72,933	0/0:28,0:28:78.25:0,78,1013	1/1:19,0:21:41.86:209,42,0	1/1:22,4:26:71.24:490,71,0	1/1:25,2:27:74.83:382,75,0	1/1:10,0:10:28.40:144,28,0
chr10	58564368	.	CAT	C	7366.76	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=19.057;DP=640;FS=3.915;HRun=0;HaplotypeScore=140.4243;InbreedingCoeff=0.9966;MQ=84.88;MQ0=0;MQRankSum=-6.940;QD=27.28;ReadPosRankSum=4.985;VQSLOD=6.2385;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,129,2512	0/0:14,0:14:42.14:0,42,852	0/0:23,0:23:64.84:0,65,1140	0/0:31,0:30:43.38:0,43,1506	0/0:27,0:27:75.24:0,75,1482	0/0:19,0:19:57.18:0,57,1121	0/0:24,0:24:72.25:0,72,1436	0/0:31,0:31:93.31:0,93,1820	1/1:1,18:19:57.14:635,57,0	1/1:1,21:22:66.15:712,66,0	1/1:1,12:13:33.01:334,33,0	0/0:19,0:19:57.18:0,57,1122	1/1:3,17:20:59.11:563,59,0	1/1:0,20:20:48.34:576,48,0	1/1:4,16:20:53.59:533,54,0	0/0:15,1:16:13.24:0,13,867	0/0:31,0:31:93.32:0,93,1890	0/0:20,0:20:60.21:0,60,1202	1/1:0,15:15:45.11:484,45,0	1/1:1,24:25:41.72:493,42,0	1/1:4,31:35:67.75:694,68,0	0/0:19,0:19:57.20:0,57,1151	0/0:26,0:26:75.26:0,75,1485	0/0:27,0:27:78.27:0,78,1582	1/1:4,17:21:47.23:481,47,0	1/1:4,18:22:65.84:673,66,0	1/1:3,25:28:84.02:863,84,0	1/1:0,10:10:30.08:324,30,0
chr10	58564371	.	CCA	C	7299.05	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=19.512;DP=652;FS=3.905;HRun=0;HaplotypeScore=141.3708;InbreedingCoeff=0.9966;MQ=85.67;MQ0=0;MQRankSum=-3.131;QD=26.35;ReadPosRankSum=5.385;VQSLOD=6.0829;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,126,2558	0/0:14,0:14:42.14:0,42,842	0/0:25,0:25:70.35:0,70,1210	0/0:29,0:29:65.19:0,65,1511	0/0:29,0:29:78.26:0,78,1549	0/0:19,0:19:57.20:0,57,1156	0/0:25,0:25:75.26:0,75,1471	0/0:31,0:31:93.29:0,93,1766	1/1:2,18:20:54.96:631,55,0	1/1:1,21:22:66.15:712,66,0	1/1:0,12:12:30.07:316,30,0	0/0:19,0:19:57.20:0,57,1157	1/1:2,17:19:51.90:530,52,0	1/1:2,19:21:50.81:596,51,0	1/1:3,16:19:50.47:506,50,0	0/0:15,1:16:13.26:0,13,880	0/0:33,0:33:99:0,99,2007	0/0:20,0:20:60.21:0,60,1198	1/1:1,15:16:46.66:487,47,0	1/1:2,23:25:41.64:499,42,0	1/1:11,30:41:68.92:708,69,0	0/0:21,0:21:63.21:0,63,1236	0/0:25,0:25:72.25:0,72,1462	0/0:27,0:27:78.27:0,78,1565	1/1:3,18:21:47.80:489,48,0	1/1:4,18:22:60.31:653,60,0	1/1:4,25:29:81.13:848,81,0	1/1:0,10:10:30.07:324,30,0
chr10	58564372	.	CA	C	7013.17	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=18.939;DP=650;FS=3.922;HRun=2;HaplotypeScore=129.0923;InbreedingCoeff=0.9979;MQ=84.59;MQ0=0;MQRankSum=-7.100;QD=25.32;ReadPosRankSum=4.688;VQSLOD=4.6445;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,126,1874	0/0:14,0:14:42.14:0,42,613	0/0:22,0:22:65.77:0,66,857	0/0:29,0:29:80.02:0,80,1075	0/0:29,0:29:78.25:0,78,1144	0/0:19,0:19:57.17:0,57,805	0/0:25,0:25:69.22:0,69,998	0/0:28,0:28:84.26:0,84,1207	1/1:20,0:20:60.11:631,60,0	1/1:22,0:22:66.09:663,66,0	1/1:12,0:12:30.04:293,30,0	0/0:20,0:20:57.18:0,57,828	1/1:19,1:20:59.99:551,60,0	1/1:21,0:22:63:586,63,0	1/1:17,2:19:50.09:469,50,0	0/0:16,0:16:15.48:0,15,634	0/0:35,0:35:99:0,105,1481	0/0:21,0:21:63.14:0,63,878	1/1:16,0:16:48.08:478,48,0	1/1:24,0:25:50.70:465,51,0	1/1:30,10:41:69.10:708,69,0	0/0:21,0:21:63.19:0,63,896	0/0:25,0:25:72.24:0,72,1077	0/0:27,0:27:78.24:0,78,1122	1/1:21,0:21:47.79:443,48,0	1/1:20,0:20:60.09:616,60,0	1/1:27,2:29:81.11:808,81,0	1/1:10,0:10:30.06:302,30,0
chr10	58564802	.	A	ATAT	29060.47	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-9.009;DP=714;FS=6.580;HRun=0;HaplotypeScore=98.2576;InbreedingCoeff=0.9701;MQ=73.06;MQ0=0;MQRankSum=-4.172;QD=50.98;ReadPosRankSum=4.820;VQSLOD=7.2613;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:9,57:67:99:2789,126,0	0/0:10,0:10:27.09:0,27,450	0/0:16,0:16:18.98:0,19,510	0/0:12,0:12:11.40:0,11,269	1/1:1,36:38:84.29:1858,84,0	1/1:3,17:21:36.12:814,36,0	1/1:2,24:26:69.24:1558,69,0	0/0:37,0:37:93.31:0,93,1524	1/1:1,26:27:72.25:1628,72,0	1/1:3,20:23:63.22:1414,63,0	1/1:2,16:18:48.12:1038,48,0	1/1:1,32:36:75.26:1697,75,0	1/1:1,17:19:42.14:936,42,0	1/1:2,20:24:42.14:951,42,0	1/1:2,27:29:78.22:1718,78,0	0/0:35,0:35:99:0,99,1617	0/0:34,0:34:90.27:0,90,1438	1/1:0,25:27:66.18:1446,66,0	1/1:2,6:10:27.05:482,27,0	1/1:2,19:22:48.04:944,48,0	1/1:0,33:33:81.21:1785,81,0	1/1:1,20:21:42.14:940,42,0	1/1:1,18:20:48.16:1086,48,0	1/1:1,27:28:72.71:1631,73,0	1/1:1,17:18:45.15:1017,45,0	1/1:2,23:25:69.24:1537,69,0	1/1:1,28:29:75.22:1653,75,0	1/1:3,6:9:6.02:136,6,0
chr10	58565393	.	CTT	C	2541.40	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=10.295;DP=713;FS=25.995;HRun=3;HaplotypeScore=86.5565;InbreedingCoeff=0.9974;MQ=86.17;MQ0=0;MQRankSum=-4.222;QD=41.66;ReadPosRankSum=2.560;VQSLOD=2.2236;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,43:43:99:1882,123,0	0/0:11,0:11:33.10:0,33,596	0/0:26,0:26:75.12:0,75,1384	0/0:29,0:29:82.10:0,82,1487	1/1:0,18:18:51.17:781,51,0	0/0:14,0:14:42.14:0,42,811	0/0:30,0:30:90.30:0,90,1685	0/0:33,0:33:93.04:0,93,1679	0/0:29,0:29:84.27:0,84,1559	0/0:31,0:31:93.32:0,93,1779	0/0:27,0:27:81.25:0,81,1448	0/0:34,0:34:96.31:0,96,1754	0/0:39,0:39:99:0,117,2184	0/0:30,0:30:84.27:0,84,1552	0/0:24,0:24:72.24:0,72,1360	0/0:27,0:27:81.26:0,81,1502	0/0:32,0:32:96.31:0,96,1808	0/0:21,0:21:60.19:0,60,1111	0/0:26,0:26:78.23:0,78,1405	0/0:12,0:12:36.12:0,36,695	0/0:41,0:42:99:0,126,2317	0/0:19,0:19:57.19:0,57,1057	0/0:7,0:7:21.07:0,21,393	0/0:29,0:29:87.29:0,87,1620	0/0:14,0:14:42.13:0,42,738	0/0:31,0:31:93.31:0,93,1745	0/0:25,0:25:75.25:0,75,1416	0/0:10,0:10:30.08:0,30,516
chr10	58566246	.	GA	G	7636.56	PASS	AB=0.906;AC=41;AF=0.732;AN=56;BaseQRankSum=8.171;DP=598;FS=0.386;HRun=1;HaplotypeScore=115.0693;InbreedingCoeff=0.8345;MQ=60.06;MQ0=31;MQRankSum=0.111;QD=21.27;ReadPosRankSum=3.030;VQSLOD=5.0669;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:59,1:60:56.48:0,56,1357	0/0:9,0:10:18.45:0,18,240	0/0:42,0:18:48.63:0,49,765	0/0:58,0:23:68.53:0,69,885	0/0:26,0:26:42.09:0,42,536	1/1:3,7:10:23.84:281,24,0	1/1:4,15:18:33.10:456,33,0	0/1:26,3:28:27.44:27,0,848	1/1:0,20:21:32.93:402,33,0	1/1:3,10:13:34.32:406,34,0	1/1:0,11:11:24.04:331,24,0	1/1:7,14:19:43.42:494,43,0	1/1:0,16:17:27.09:372,27,0	1/1:1,7:7:9.03:124,9,0	1/1:0,13:14:21.06:279,21,0	0/0:13,0:13:4.89:0,5,372	0/0:19,2:28:25.74:0,26,769	1/1:5,7:11:20.48:289,20,0	1/1:5,20:25:44.37:721,44,0	1/1:1,9:8:5.98:83,6,0	1/1:5,36:34:62.90:839,63,0	1/1:4,7:11:20.96:254,21,0	1/1:3,9:9:6.42:234,6,0	1/1:4,21:24:55.51:702,56,0	1/1:0,18:18:36.11:484,36,0	1/1:2,8:12:29.39:414,29,0	1/1:1,12:13:18.05:236,18,0	1/1:0,7:6:15.05:207,15,0
chr10	58566247	.	ATGTG	A	719.68	PASS	AB=0.926;AC=14;AF=0.280;AN=50;BaseQRankSum=-0.225;DP=633;FS=0.000;HRun=0;HaplotypeScore=160.3816;InbreedingCoeff=0.3702;MQ=58.83;MQ0=32;MQRankSum=1.192;QD=3.46;ReadPosRankSum=-0.171;VQSLOD=2.5257;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:34,25:59:4.66:258,0,5	0/0:4,0:11:10.93:0,11,126	./.	./.	1/1:9,17:26:18.06:283,18,0	1/1:10,0:10:5.14:44,5,0	1/1:22,0:21:1.01:3,1,0	0/0:29,0:28:17.37:0,17,131	0/0:24,0:23:15.47:0,15,206	0/0:17,0:16:25.26:0,25,263	0/0:12,0:12:0.47:0,0,1	1/1:22,0:20:1.75:86,2,0	0/0:18,0:18:5.80:0,6,46	0/0:10,0:9:2.53:0,3,21	0/0:15,0:15:8.83:0,9,116	0/0:10,0:15:6.01:0,6,77	0/0:29,0:28:15.02:0,15,205	0/1:13,0:11:59.09:59,0,70	0/0:28,0:27:22.42:0,22,282	./.	0/0:46,0:36:8.50:0,8,91	0/1:14,0:14:13.14:40,0,13	0/1:13,0:10:15.45:15,0,16	1/1:29,0:26:9.15:77,9,0	0/0:19,0:18:12.45:0,12,122	0/0:18,0:17:24.39:0,24,252	0/0:14,0:14:11.79:0,12,150	0/0:8,0:6:2.98:0,3,22
chr10	58566286	.	TGC	T	4287.30	PASS	AB=1.000;AC=43;AF=0.768;AN=56;BaseQRankSum=0.912;DP=548;FS=11.503;HRun=0;HaplotypeScore=107.8808;InbreedingCoeff=0.5607;MQ=51.34;MQ0=22;MQRankSum=-0.274;QD=10.26;ReadPosRankSum=0.017;VQSLOD=3.5033;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:61.24:0,61,476	0/0:10,0:10:5.02:0,5,126	0/1:19,0:10:45.33:45,0,55	0/1:19,0:10:18:83,0,18	0/0:27,0:27:9.86:0,10,166	1/1:12,1:13:35.97:309,36,0	1/1:19,1:18:32.88:264,33,0	0/1:30,0:28:50.79:51,0,319	1/1:23,0:22:10.05:149,10,0	1/1:21,0:21:32.13:342,32,0	1/1:7,0:7:5.99:50,6,0	1/1:25,1:24:63.73:527,64,0	1/1:14,0:14:14.85:110,15,0	1/1:10,0:10:11.94:93,12,0	1/1:16,0:16:15.42:134,15,0	0/0:13,0:12:20.43:0,20,148	0/0:25,0:24:5.42:0,5,150	1/1:17,0:16:36.81:305,37,0	1/1:15,0:13:11.85:155,12,0	1/1:16,0:13:17.97:147,18,0	1/1:36,0:28:19.28:158,19,0	1/1:14,2:16:31.13:244,31,0	1/1:18,0:15:29.97:249,30,0	1/1:25,2:23:35.37:300,35,0	1/1:12,0:11:10.88:118,11,0	1/1:17,0:16:23.49:216,23,0	1/1:21,0:20:25.75:222,26,0	1/1:5,0:2:2.94:18,3,0
chr10	58569553	.	CA	C	19680.31	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=11.835;DP=732;FS=8.511;HRun=1;HaplotypeScore=84.1540;InbreedingCoeff=0.9999;MQ=91.74;MQ0=0;MQRankSum=-6.306;QD=38.66;ReadPosRankSum=6.008;VQSLOD=4.8123;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,114,1794	0/0:11,0:11:33.11:0,33,527	0/0:32,0:32:93.25:0,93,1340	0/0:30,0:30:73.39:0,73,1230	0/0:16,0:16:42.13:0,42,646	1/1:0,17:17:48.16:671,48,0	1/1:0,33:33:96.32:1339,96,0	0/0:28,0:28:84.28:0,84,1324	1/1:0,25:25:63.10:881,63,0	1/1:0,30:30:90.30:1257,90,0	1/1:0,17:17:45.12:606,45,0	1/1:0,28:28:78.26:1088,78,0	1/1:0,28:28:69.20:960,69,0	1/1:0,24:24:66.22:916,66,0	1/1:0,37:37:99:1510,108,0	0/0:28,1:29:45.34:0,45,1278	0/0:39,0:39:99:0,117,1857	1/1:2,26:28:84.24:1145,84,0	1/1:0,19:19:57.17:758,57,0	1/1:0,19:19:57.19:789,57,0	1/1:0,36:36:99:1467,105,0	1/1:0,21:21:57.19:791,57,0	1/1:0,15:15:42.13:571,42,0	1/1:0,33:33:90.30:1258,90,0	1/1:0,24:24:57.19:796,57,0	1/1:0,23:23:69.23:962,69,0	1/1:0,37:37:96.32:1329,96,0	1/1:0,15:15:42.14:586,42,0
chr10	58569778	.	GT	G	20919.70	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=12.993;DP=757;FS=0.000;HRun=2;HaplotypeScore=101.9786;InbreedingCoeff=0.9999;MQ=89.38;MQ0=0;MQRankSum=-6.438;QD=35.28;ReadPosRankSum=5.561;VQSLOD=4.5954;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,46:47:99:1440,111,0	0/0:12,0:12:36.12:0,36,540	0/0:28,0:28:75.25:0,75,1103	0/0:28,0:28:78.16:0,78,1077	1/1:0,17:17:51.17:661,51,0	1/1:1,19:20:51.17:662,51,0	1/1:0,37:37:99:1285,99,0	0/0:35,0:35:99:0,102,1485	1/1:1,22:23:63.20:818,63,0	1/1:0,28:28:84.27:1090,84,0	1/1:1,12:13:30.10:387,30,0	1/1:0,29:29:75.22:973,75,0	1/1:0,29:29:81.26:1050,81,0	1/1:1,25:26:69.22:895,69,0	1/1:0,27:27:75.24:973,75,0	0/0:31,0:31:93.30:0,93,1374	0/0:30,0:30:90.29:0,90,1329	1/1:0,29:29:84.27:1090,84,0	1/1:0,18:18:54.16:684,54,0	1/1:0,20:20:60.13:758,60,0	1/1:0,32:32:78.25:1012,78,0	1/1:0,25:25:69.18:876,69,0	1/1:0,23:23:66.17:836,66,0	1/1:0,38:38:99:1285,99,0	1/1:0,28:28:84.27:1090,84,0	1/1:0,24:24:72.23:921,72,0	1/1:0,36:36:96.31:1239,96,0	1/1:0,24:24:69.22:895,69,0
chr10	58570273	.	GT	G	640.95	PASS	AB=0.987;AC=11;AF=0.196;AN=56;BaseQRankSum=12.841;DP=716;FS=5.130;HRun=2;HaplotypeScore=158.4869;InbreedingCoeff=0.4358;MQ=71.54;MQ0=3;MQRankSum=0.031;QD=2.95;ReadPosRankSum=4.740;VQSLOD=0.3948;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,116,724	0/0:11,0:11:30.09:0,30,418	0/0:20,0:18:8.26:0,8,377	0/0:27,0:26:70.45:0,70,757	0/0:17,0:16:42.84:0,43,280	0/1:19,0:19:12.20:90,0,12	0/1:39,3:42:99:104,0,168	0/0:26,0:26:75.19:0,75,958	0/1:26,0:26:49.21:49,0,59	0/0:29,0:29:78.77:0,79,512	0/0:17,0:17:47.11:0,47,305	1/1:22,2:24:7.88:95,8,0	0/0:28,0:28:76.08:0,76,500	0/0:17,0:17:43.93:0,44,283	0/0:32,0:32:91:0,91,607	0/0:39,0:39:99:0,111,1561	0/0:28,0:28:70:0,70,995	1/1:16,1:17:8.83:73,9,0	0/0:19,0:19:54.53:0,55,367	0/0:28,0:27:76.24:0,76,495	0/0:35,0:35:75.73:0,76,533	0/1:29,0:29:11.25:104,0,11	0/1:23,0:23:5.54:76,0,6	1/1:35,2:37:30.56:209,31,0	0/0:21,0:21:55.40:0,55,354	0/0:33,0:33:94.96:0,95,623	0/0:19,0:19:43.64:0,44,261	0/0:7,0:6:15.41:0,15,89
chr10	58570275	.	TGG	T	13786.01	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=9.223;DP=711;FS=3.266;HRun=9;HaplotypeScore=127.5592;InbreedingCoeff=0.9960;MQ=72.60;MQ0=3;MQRankSum=-4.000;QD=24.49;ReadPosRankSum=5.544;VQSLOD=3.6536;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,42:45:99:1292,111,0	0/0:10,0:10:27.09:0,27,443	0/0:19,0:17:22.95:0,23,410	0/0:28,0:27:60.68:0,61,763	1/1:3,14:16:39.11:452,39,0	1/1:16,2:18:40.68:302,41,0	1/1:34,8:42:93.86:899,94,0	0/0:27,0:27:63.20:0,63,1010	1/1:23,2:25:61.33:494,61,0	1/1:4,25:29:75.22:869,75,0	1/1:3,14:17:39.11:454,39,0	1/1:25,0:25:53.95:395,54,0	1/1:4,22:26:63.18:734,63,0	1/1:3,15:18:39.07:439,39,0	1/1:5,26:31:75.21:874,75,0	0/0:37,0:37:99:0,99,1622	0/0:26,0:27:75.21:0,75,1179	1/1:16,1:17:37.59:296,38,0	1/1:0,20:20:57.16:664,57,0	1/1:5,23:27:63.17:734,63,0	1/1:1,33:34:93.28:1082,93,0	1/1:28,2:30:59.83:442,60,0	1/1:21,3:24:42.44:348,42,0	1/1:36,1:37:85.44:743,85,0	1/1:1,20:21:51.15:594,51,0	1/1:4,29:33:87.26:1013,87,0	1/1:1,18:19:41.98:489,42,0	1/1:2,5:6:15.04:175,15,0
chr10	58570451	.	A	ACACACACACAC	8668.51	PASS	AB=0.948;AC=21;AF=0.375;AN=56;BaseQRankSum=9.094;DP=703;FS=39.131;HRun=0;HaplotypeScore=299.6443;InbreedingCoeff=-0.5726;MQ=46.13;MQ0=4;MQRankSum=-6.657;QD=16.48;ReadPosRankSum=4.629;VQSLOD=2.7615;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:12,6:28:4.95:98,0,5	0/0:11,0:11:26.67:0,27,1006	0/0:24,0:14:31.43:0,31,813	0/0:23,0:13:33.08:0,33,749	0/1:14,5:28:53.36:140,0,53	0/1:27,0:27:17.14:674,0,17	0/1:33,0:33:99:500,0,259	0/0:35,0:36:99:0,108,2698	0/1:26,0:27:99:908,0,185	0/1:27,0:25:99:380,0,587	0/1:13,0:13:48.54:102,0,49	0/1:9,8:21:28.10:28,0,124	0/1:29,0:28:99:538,0,468	0/1:22,0:22:99:195,0,188	0/1:35,0:35:99:114,0,431	0/0:30,0:30:87.28:0,87,2717	0/0:23,0:24:72.22:0,72,2153	0/1:16,0:16:99:456,0,345	0/1:32,0:28:99:1061,0,409	0/0:27,0:26:26.88:0,27,282	0/1:26,0:26:99:150,0,193	0/1:25,0:25:99:198,0,175	0/1:14,0:14:63.50:285,0,64	0/1:32,0:32:99:161,0,189	0/1:29,0:29:88.08:327,0,88	0/1:25,0:25:99:958,0,399	0/1:20,0:20:99:822,0,187	0/1:17,0:17:99:575,0,130
chr10	58572646	.	G	GCT	1415.29	PASS	AB=0.879;AC=26;AF=0.520;AN=50;BaseQRankSum=-2.532;DP=588;FS=5.147;HRun=0;HaplotypeScore=108.4698;InbreedingCoeff=0.1391;MQ=65.29;MQ0=6;MQRankSum=0.081;QD=3.92;ReadPosRankSum=-2.475;VQSLOD=2.0047;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:30:11.12:0,11,56	1/1:8,5:14:6.02:88,6,0	./.	./.	0/0:10,0:11:2.84:0,3,14	1/1:17,0:17:0.47:1,0,0	0/0:28,0:30:26.61:0,27,228	0/0:29,0:28:3.01:0,3,32	0/1:14,4:19:26.22:38,0,26	0/1:24,0:23:45.95:111,0,46	0/0:12,0:12:2.56:0,3,20	0/0:16,0:16:14.51:0,15,99	0/1:14,10:27:67.01:67,0,70	0/1:19,1:18:21.78:75,0,22	0/1:16,11:32:50.57:129,0,51	1/1:11,8:19:6.01:71,6,0	0/0:11,0:11:5.60:0,6,64	0/0:24,0:24:30.46:0,30,301	1/1:20,0:18:6.02:83,6,0	1/1:16,2:18:3.01:44,3,0	1/1:19,7:27:3.01:45,3,0	./.	0/1:17,0:17:26.29:36,0,26	1/1:16,16:34:12.94:340,13,0	0/1:18,0:19:2.11:115,0,2	1/1:16,5:21:14.22:175,14,0	0/1:14,2:18:81.32:81,0,148	1/1:14,0:13:8.21:73,8,0
chr10	58572772	.	AATT	A	57.57	PASS	AB=0.871;AC=8;AF=0.143;AN=56;BaseQRankSum=9.445;DP=431;FS=34.720;HRun=0;HaplotypeScore=142.3532;InbreedingCoeff=-0.1876;MQ=68.38;MQ0=0;MQRankSum=-7.529;QD=0.39;ReadPosRankSum=-0.263;VQSLOD=1.1788;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:27.08:0,27,609	0/0:6,0:6:15.05:0,15,302	0/0:22,0:18:46.39:0,46,999	0/0:24,1:23:2.51:0,3,1029	0/0:23,1:24:32.15:0,32,1018	0/0:14,1:15:9.75:0,10,918	0/0:12,1:12:36.12:0,36,847	0/1:16,1:17:9.38:9,0,986	0/0:14,0:14:28.46:0,28,928	0/1:18,4:21:54.31:54,0,1194	0/1:13,6:19:20.87:21,0,801	0/0:10,1:10:30.10:0,30,719	0/0:10,2:12:10.07:0,10,642	0/0:6,1:6:14.59:0,15,368	0/1:12,6:19:56.54:57,0,647	0/1:14,1:15:1.72:2,0,893	0/0:8,0:8:24.08:0,24,589	0/0:8,0:8:24.08:0,24,516	0/0:10,0:10:30.10:0,30,739	0/0:18,7:25:4.80:0,5,919	0/0:16,0:16:42.14:0,42,1000	0/0:17,4:21:0.78:0,1,939	0/1:12,1:13:14.87:15,0,846	0/0:15,0:14:39.08:0,39,808	0/1:18,3:21:9.38:9,0,923	0/1:21,2:23:14.42:14,0,1482	0/0:11,3:14:29.42:0,29,690	0/0:3,0:2:6.02:0,6,148
chr10	58572787	.	G	GA	138.29	PASS	AB=0.885;AC=10;AF=0.179;AN=56;BaseQRankSum=8.853;DP=360;FS=23.997;HRun=0;HaplotypeScore=102.4298;InbreedingCoeff=-0.2208;MQ=66.51;MQ0=0;MQRankSum=-5.747;QD=1.06;ReadPosRankSum=0.298;VQSLOD=0.4648;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:8,1:9:3.95:4,0,286	0/1:4,2:6:4.30:4,0,112	0/0:16,0:13:25.09:0,25,296	0/1:16,1:15:10.66:11,0,287	0/0:13,5:18:23.25:0,23,459	0/0:12,0:12:5.85:0,6,390	0/0:17,0:17:49.10:0,49,574	0/1:13,4:17:99:125,0,269	0/0:12,0:12:8.08:0,8,359	0/1:16,0:16:0.36:0,0,518	0/0:20,0:20:17.10:0,17,458	0/0:8,1:9:2.14:0,2,216	0/1:13,2:15:11.52:12,0,312	0/1:7,1:8:13.05:13,0,224	0/1:15,2:17:67.30:67,0,236	0/1:9,2:11:17.22:17,0,288	0/0:6,0:6:15.05:0,15,207	0/0:6,0:6:15.05:0,15,204	0/0:9,0:9:23.11:0,23,300	0/0:16,0:16:20.47:0,20,400	0/0:14,0:14:42.14:0,42,586	0/0:19,0:18:37.42:0,37,479	0/0:14,0:14:5.77:0,6,327	0/0:9,0:8:9.01:0,9,123	0/1:13,1:14:10.68:11,0,423	0/0:19,0:19:6.24:0,6,595	0/0:11,0:11:20.44:0,20,292	0/0:3,0:3:9.03:0,9,126
chr10	58572792	.	A	ATG	566.38	PASS	AB=0.924;AC=11;AF=0.196;AN=56;BaseQRankSum=8.137;DP=312;FS=21.721;HRun=0;HaplotypeScore=94.5926;InbreedingCoeff=-0.2515;MQ=60.49;MQ0=0;MQRankSum=-6.235;QD=3.99;ReadPosRankSum=-1.025;VQSLOD=0.9310;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:22.15:0,22,361	0/1:4,1:5:41.58:46,0,42	0/1:11,1:9:31.67:32,0,205	0/0:13,0:11:23.38:0,23,238	0/0:14,0:17:15.83:0,16,468	0/0:12,0:12:34.64:0,35,495	0/1:13,1:15:32.19:32,0,584	0/1:8,5:13:99:272,0,185	0/1:11,1:12:22.15:22,0,410	0/0:15,0:15:41.62:0,42,622	0/1:14,0:16:58.76:59,0,417	0/0:5,1:6:14.08:0,14,201	0/1:13,1:14:87.90:88,0,363	0/0:7,0:7:18.95:0,19,273	0/1:12,0:13:2.86:3,0,248	0/0:10,0:10:13.86:0,14,334	0/0:5,0:5:15.04:0,15,221	0/0:5,0:5:12.04:0,12,192	0/0:8,0:8:19.24:0,19,311	0/1:13,0:14:86.55:87,0,350	0/0:14,0:14:39.01:0,39,602	0/1:17,1:17:57.92:58,0,490	0/0:12,0:12:26.30:0,26,398	0/0:6,0:5:5.95:0,6,98	0/0:12,0:13:32.06:0,32,500	0/0:14,1:15:8.23:0,8,593	0/1:9,0:10:11.16:11,0,317	0/0:3,0:3:9.03:0,9,147
chr10	58573623	.	GAGAGAGACAGAGAC	G	11981.28	PASS	AB=0.709;AC=39;AF=0.696;AN=56;BaseQRankSum=13.061;DP=733;FS=0.000;HRun=0;HaplotypeScore=243.4564;InbreedingCoeff=0.6368;MQ=57.13;MQ0=10;MQRankSum=-7.770;QD=23.49;ReadPosRankSum=-3.452;VQSLOD=3.0052;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,99,4775	0/0:6,0:6:3.01:0,3,130	0/0:41,0:15:9.88:0,10,266	0/1:73,0:36:2.17:2,0,502	0/0:26,0:26:45.08:0,45,2215	1/1:6,21:27:21.96:591,22,0	1/1:4,24:28:8.92:268,9,0	0/0:45,0:43:87.28:0,87,3119	1/1:4,17:21:20.61:827,21,0	1/1:7,25:32:72.24:1899,72,0	1/1:5,7:12:2.66:5,3,0	1/1:4,21:25:15.38:801,15,0	1/1:5,19:24:39.13:1345,39,0	1/1:1,19:20:18.18:505,18,0	1/1:5,20:25:26.74:718,27,0	0/0:21,0:21:51.16:0,51,2492	0/0:42,0:42:91.19:0,91,4714	0/1:8,22:28:32.64:435,0,33	1/1:5,13:18:39.09:1211,39,0	1/1:4,3:7:6.91:181,7,0	1/1:17,19:35:5.01:12,5,0	1/1:1,12:13:10.39:269,10,0	1/1:3,11:13:6.68:179,7,0	0/1:10,34:44:8.44:86,0,8	1/1:9,0:9:4.87:177,5,0	1/1:4,24:28:69.21:1864,69,0	1/1:3,17:20:12.04:419,12,0	1/1:3,0:3:6.02:189,6,0
chr10	58573637	.	C	CAG	4407.52	PASS	AB=0.933;AC=33;AF=0.589;AN=56;BaseQRankSum=10.197;DP=653;FS=1.471;HRun=0;HaplotypeScore=145.3534;InbreedingCoeff=0.5185;MQ=53.57;MQ0=12;MQRankSum=-6.483;QD=11.88;ReadPosRankSum=-5.518;VQSLOD=3.7505;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,102,1356	0/0:3,0:3:9.03:0,9,119	0/0:34,0:12:24.03:0,24,289	0/0:60,0:25:25.13:0,25,407	0/0:26,0:26:54.63:0,55,703	1/1:24,0:24:20.42:323,20,0	1/1:27,0:27:9.03:155,9,0	0/0:51,0:49:99:0,123,1620	1/1:20,0:19:17.76:411,18,0	1/1:28,0:28:25.26:630,25,0	0/0:7,0:7:0.47:0,0,1	1/1:23,0:23:29.75:475,30,0	1/1:22,0:22:1.35:373,1,0	1/1:21,0:21:11.45:200,11,0	1/1:20,0:20:23.12:412,23,0	0/0:21,0:21:57.19:0,57,758	0/0:38,0:38:99:0,99,1280	0/1:25,0:25:46.41:80,0,46	0/1:16,0:15:37.22:131,0,37	1/1:4,0:4:5.54:102,6,0	0/1:24,0:24:2.36:46,0,2	1/1:12,0:12:8.15:154,8,0	1/1:13,0:12:5.37:103,5,0	1/1:39,1:40:8.27:154,8,0	1/1:3,3:7:6.02:103,6,0	0/1:25,0:25:84.39:350,0,84	1/1:18,0:18:12.02:158,12,0	0/1:1,1:2:7.40:46,0,7
chr10	58574037	.	ACCACCACCACCAC	A	6364.98	PASS	AB=0.545;AC=35;AF=0.648;AN=54;BaseQRankSum=8.393;DP=350;FS=15.176;HRun=0;HaplotypeScore=104.9122;InbreedingCoeff=0.6996;MQ=51.64;MQ0=4;MQRankSum=-6.044;QD=26.30;ReadPosRankSum=3.771;VQSLOD=2.3510;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:10:27.09:0,27,1000	0/0:5,0:5:12.04:0,12,448	0/0:16,0:7:12.04:0,12,274	0/0:16,0:5:6.49:0,6,197	0/0:6,0:6:18.06:0,18,873	1/1:1,7:8:5.72:187,6,0	1/1:8,22:30:11.90:191,12,0	0/0:9,0:9:15.51:0,16,470	1/1:6,9:15:18.06:535,18,0	1/1:4,10:14:24.08:564,24,0	./.	1/1:4,16:20:21.07:734,21,0	1/1:1,13:14:17.73:652,18,0	1/1:5,13:18:21.07:701,21,0	1/1:3,10:13:8.89:344,9,0	0/0:5,0:5:12.04:0,12,581	0/0:19,0:19:54.16:0,54,2024	1/1:3,5:7:6.02:221,6,0	1/1:4,7:9:21.06:428,21,0	1/1:4,6:10:18.06:405,18,0	1/1:12,24:35:2.11:35,2,0	0/1:1,5:6:7.88:220,0,8	1/1:1,6:7:3.01:71,3,0	0/0:3,14:17:0.47:0,0,1	1/1:1,5:6:3.01:114,3,0	1/1:3,13:16:27.81:631,28,0	1/1:4,5:9:9.03:295,9,0	1/1:1,0:1:3.01:37,3,0
chr10	58575871	.	TACACACACACACAC	T	2362.07	PASS	AB=0.869;AC=15;AF=0.288;AN=52;BaseQRankSum=4.751;DP=526;FS=19.755;HRun=0;HaplotypeScore=205.8557;InbreedingCoeff=0.5262;MQ=71.90;MQ0=5;MQRankSum=-4.904;QD=15.75;ReadPosRankSum=-0.981;VQSLOD=0.8230;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:18:9.03:0,9,404	0/0:5,0:9:3.01:0,3,183	./.	./.	0/0:16,0:20:6.02:0,6,367	1/1:14,7:21:9.50:351,9,0	1/1:17,3:20:2.06:115,2,0	0/0:22,0:22:21.06:0,21,746	0/1:9,2:11:61.44:61,0,103	0/0:16,0:16:17.27:0,17,426	0/0:13,0:15:5.22:0,5,155	1/1:6,4:10:6.02:233,6,0	0/0:13,0:16:9.97:0,10,225	1/1:12,1:19:14.35:347,14,0	0/0:11,0:19:15.03:0,15,328	0/0:7,0:12:18.06:0,18,954	0/0:17,0:26:18.06:0,18,578	0/1:13,0:13:30.78:111,0,31	0/0:15,0:15:8.82:0,9,296	0/0:17,0:23:21.04:0,21,569	0/0:23,0:22:12.02:0,12,202	1/1:10,8:18:24.08:926,24,0	0/1:11,5:16:13.89:225,0,14	1/1:17,4:21:6.49:160,6,0	0/0:14,0:18:18.06:0,18,542	0/0:17,0:19:36.08:0,36,992	0/0:18,0:21:28.39:0,28,577	0/0:13,0:16:18.06:0,18,527
chr10	58576121	.	T	TATG	32022.21	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-12.565;DP=711;FS=3.739;HRun=0;HaplotypeScore=82.9672;InbreedingCoeff=0.9999;MQ=80.08;MQ0=2;MQRankSum=-7.746;QD=56.18;ReadPosRankSum=7.410;VQSLOD=6.9156;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,19:23:54.19:1223,54,0	0/0:16,0:16:36.12:0,36,600	0/0:20,0:20:56.23:0,56,851	0/0:20,0:20:42.58:0,43,646	1/1:2,28:31:81.28:1820,81,0	1/1:0,24:25:63.22:1425,63,0	1/1:2,20:24:54.19:1203,54,0	0/0:40,0:40:99:0,108,1718	1/1:4,22:26:72.25:1608,72,0	1/1:3,25:26:75.23:1594,75,0	1/1:2,20:23:57.20:1271,57,0	1/1:1,20:21:51.18:1155,51,0	1/1:1,17:18:51.18:1155,51,0	1/1:5,27:33:60.21:1358,60,0	1/1:1,29:31:72.25:1630,72,0	0/0:21,0:21:63.22:0,63,1040	0/0:24,0:24:72.25:0,72,1184	1/1:3,27:32:81.28:1783,81,0	1/1:3,19:21:57.18:1243,57,0	1/1:2,40:42:99:2609,117,0	1/1:2,16:19:36.12:797,36,0	1/1:3,24:27:69.24:1545,69,0	1/1:1,28:29:78.23:1735,78,0	1/1:2,16:18:51.17:1121,51,0	1/1:3,21:26:57.20:1277,57,0	1/1:2,29:31:90.31:2035,90,0	1/1:5,19:24:60.21:1349,60,0	1/1:0,16:16:48.16:1087,48,0
chr10	58576593	.	CGAGGAGGTCCTG	C	43940.83	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=19.421;DP=826;FS=5.211;HRun=0;HaplotypeScore=328.1247;InbreedingCoeff=0.9975;MQ=80.32;MQ0=0;MQRankSum=-21.020;QD=78.75;ReadPosRankSum=7.126;VQSLOD=3.8851;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:63,0:63:99:0,172,10109	0/0:6,0:6:18.06:0,18,1008	0/0:33,0:34:93.28:0,93,5046	0/0:35,0:35:99:0,102,5609	0/0:27,0:27:81.28:0,81,4642	1/1:2,22:24:54.18:1869,54,0	1/1:5,21:26:57.19:1965,57,0	0/0:34,0:34:99:0,102,5645	1/1:7,36:43:96.33:3225,96,0	1/1:5,36:41:99:3912,108,0	1/1:2,14:16:27.09:1015,27,0	1/1:6,25:31:66.23:2480,66,0	1/1:2,28:30:75.26:2812,75,0	1/1:4,21:25:57.19:2010,57,0	1/1:10,28:38:78.27:2712,78,0	0/0:27,0:27:81.28:0,81,4869	0/0:42,0:42:99:0,123,6982	1/1:6,10:16:30.10:1128,30,0	1/1:5,10:15:30.10:1094,30,0	1/1:7,34:42:99:3370,99,0	1/1:9,14:23:27.56:832,28,0	1/1:2,25:27:57.20:2057,57,0	1/1:3,27:30:75.26:2700,75,0	1/1:7,16:23:21.50:732,21,0	1/1:2,29:31:84.29:3025,84,0	1/1:5,29:34:87.30:3130,87,0	1/1:6,25:31:75.26:2746,75,0	1/1:1,11:12:30.10:1128,30,0
chr10	58578838	.	A	AT	13176.12	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-9.378;DP=611;FS=3.022;HRun=9;HaplotypeScore=59.3327;InbreedingCoeff=0.9925;MQ=76.50;MQ0=0;MQRankSum=-4.082;QD=27.00;ReadPosRankSum=0.646;VQSLOD=5.1606;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,27:31:78.21:863,78,0	0/0:15,0:15:35.98:0,36,313	0/0:16,0:16:29.98:0,30,260	0/0:14,0:14:23.97:0,24,203	1/1:5,19:24:54.15:598,54,0	1/1:3,21:24:57.15:631,57,0	1/1:5,14:19:39.11:431,39,0	0/0:27,0:28:67.99:0,68,572	1/1:1,15:16:42.11:465,42,0	1/1:4,25:29:58.17:863,58,0	1/1:4,16:20:48.13:526,48,0	1/1:1,15:16:45.12:498,45,0	1/1:1,16:17:36.10:398,36,0	1/1:2,16:18:48.13:531,48,0	1/1:2,15:17:42.11:465,42,0	0/0:16,1:17:11.80:0,12,331	0/0:32,0:31:80.94:0,81,698	1/1:3,12:15:33.09:365,33,0	1/1:3,25:28:72.15:770,72,0	1/1:5,25:30:49.12:758,49,0	1/1:1,16:17:36.10:398,36,0	1/1:3,18:21:51.05:548,51,0	1/1:3,20:23:54.15:597,54,0	1/1:1,25:26:69.19:763,69,0	1/1:5,17:22:28.07:529,28,0	1/1:1,20:21:60.12:639,60,0	1/1:5,31:36:90.20:976,90,0	1/1:1,17:18:51.14:564,51,0
chr10	58579451	.	AT	A	7554.94	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=19.320;DP=737;FS=0.000;HRun=2;HaplotypeScore=101.5403;InbreedingCoeff=0.9996;MQ=77.43;MQ0=0;MQRankSum=-6.641;QD=35.64;ReadPosRankSum=1.207;VQSLOD=4.8307;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,135,2002	0/0:9,0:9:27.06:0,27,382	0/0:15,0:15:37.97:0,38,574	0/0:19,0:19:47.76:0,48,621	0/0:33,0:33:96.31:0,96,1390	1/1:1,27:28:75.24:973,75,0	1/1:1,30:31:84.19:1052,84,0	0/0:38,0:38:99:0,102,1422	1/1:0,30:30:84.27:1090,84,0	0/0:26,0:26:78.26:0,78,1169	0/0:30,0:30:90.28:0,90,1309	1/1:1,16:17:48.16:623,48,0	0/0:19,0:19:57.18:0,57,831	0/0:34,0:34:99:0,102,1522	0/0:33,0:33:99:0,99,1445	0/0:23,0:23:66.20:0,66,949	0/0:33,0:33:96.28:0,96,1371	1/1:0,16:16:48.16:623,48,0	0/0:20,0:20:57.18:0,57,836	0/0:15,0:15:45.15:0,45,674	0/0:35,0:35:99:0,105,1548	1/1:0,36:36:93.30:1207,93,0	1/1:0,24:24:69.22:896,69,0	1/1:1,29:30:84.27:1090,84,0	0/0:26,0:26:75.24:0,75,1104	0/0:30,0:30:90.28:0,90,1296	0/0:31,0:31:93.31:0,93,1388	0/0:9,0:9:27.09:0,27,401
chr10	58580386	.	A	ATGTGTG	4945.89	PASS	AB=0.605;AC=20;AF=0.357;AN=56;BaseQRankSum=-1.359;DP=777;FS=2.215;HRun=0;HaplotypeScore=184.3756;InbreedingCoeff=0.6975;MQ=53.60;MQ0=18;MQRankSum=-2.047;QD=16.54;ReadPosRankSum=-1.912;VQSLOD=4.1017;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:44:71.90:0,72,947	0/0:12,0:12:33.10:0,33,639	0/0:30,0:8:10.37:0,10,87	0/0:45,0:14:14.17:0,14,182	0/0:5,0:19:27.09:0,27,377	0/0:20,0:20:51.01:0,51,951	0/0:33,0:33:84.71:0,85,1593	0/0:28,0:27:22.19:0,22,622	0/0:24,0:26:69.18:0,69,1267	1/1:16,16:39:67.01:1451,67,0	0/0:10,9:22:0.04:0,0,1	0/0:34,0:34:78.21:0,78,1503	1/1:8,14:25:11.79:375,12,0	0/1:8,16:26:52.63:163,0,53	0/1:12,16:31:16.29:162,0,16	0/0:18,0:18:45.13:0,45,807	0/0:32,0:33:87.25:0,87,1686	0/0:28,0:28:72.14:0,72,1363	1/1:9,5:13:18.06:404,18,0	1/1:16,12:30:2.62:39,3,0	1/1:24,13:39:3.48:40,3,0	0/0:22,0:23:51.15:0,51,966	0/0:25,0:25:45.61:0,46,863	0/0:36,0:36:78.15:0,78,1407	1/1:8,10:20:3.01:39,3,0	1/1:18,19:39:66.09:1411,66,0	1/1:10,12:25:27.09:824,27,0	1/1:4,0:7:3.01:39,3,0
chr10	58580876	.	GCAGGA	G	1514.11	PASS	AB=0.808;AC=6;AF=0.107;AN=56;BaseQRankSum=3.524;DP=781;FS=57.783;HRun=0;HaplotypeScore=175.9505;InbreedingCoeff=-0.1162;MQ=62.83;MQ0=10;MQRankSum=-2.848;QD=9.07;ReadPosRankSum=0.048;VQSLOD=1.2057;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:35:93.14:0,93,2852	0/0:14,0:14:36.12:0,36,1047	0/0:42,0:22:66.22:0,66,1919	0/1:35,1:19:13.77:14,0,1270	0/0:23,0:23:69.24:0,69,2223	0/0:23,0:23:56.83:0,57,1696	0/0:35,0:35:99:0,102,3215	0/0:32,0:32:96.31:0,96,2906	0/0:27,0:27:81.26:0,81,2614	0/1:21,14:33:99:702,0,1632	0/0:7,0:7:9.03:0,9,299	0/0:50,0:51:99:0,148,4546	0/0:21,0:21:48.37:0,48,1323	0/0:21,0:21:23.06:0,23,791	0/0:26,0:25:40.01:0,40,982	0/0:33,0:33:96.32:0,96,3097	0/0:23,0:23:69.23:0,69,2192	0/0:20,0:20:60.21:0,60,1913	0/1:13,9:20:99:365,0,1139	0/1:19,8:28:4.85:5,0,1076	0/0:34,13:46:57.15:0,57,1690	0/0:34,0:34:96.32:0,96,2918	0/0:17,0:17:47.85:0,48,1596	0/0:42,0:42:99:0,117,3641	0/0:15,0:14:32.96:0,33,950	0/1:25,7:35:99:503,0,1988	0/0:24,0:23:54.19:0,54,1646	0/1:10,1:11:45.14:45,0,382
chr10	58580881	.	A	ATGTGTGTGTGTGTGTG	6378.50	PASS	AB=0.746;AC=20;AF=0.357;AN=56;BaseQRankSum=0.317;DP=845;FS=14.063;HRun=0;HaplotypeScore=338.9642;InbreedingCoeff=0.7365;MQ=57.20;MQ0=13;MQRankSum=-6.071;QD=18.49;ReadPosRankSum=-2.729;VQSLOD=1.7129;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:33:42.74:0,43,2348	0/0:9,0:14:30.10:0,30,917	0/0:44,0:21:6.01:0,6,82	0/1:33,0:17:52.97:53,0,67	0/0:24,0:24:48.15:0,48,1910	0/0:19,0:22:32.81:0,33,1254	0/0:33,0:36:66.22:0,66,2516	0/0:34,0:34:40.42:0,40,1015	0/0:28,0:28:62.87:0,63,2094	1/1:33,0:31:51.12:1394,51,0	0/1:6,0:12:0:0,0,0	0/0:44,0:49:98.74:0,99,3661	1/1:12,0:26:12.98:555,13,0	0/1:17,0:34:0:0,0,0	0/0:22,5:39:0.58:0,1,1	0/0:31,0:32:63.16:0,63,2285	0/0:25,0:27:56.05:0,56,1584	0/0:19,0:21:42.14:0,42,1552	1/1:24,0:22:26.58:1239,27,0	1/1:28,0:28:2.13:110,2,0	1/1:47,0:45:9.02:237,9,0	0/0:28,0:34:75.19:0,75,2795	0/0:19,0:19:32.54:0,33,1127	0/0:36,0:43:96.24:0,96,3344	0/1:14,0:25:0:0,0,0	1/1:35,0:35:53.65:2130,54,0	1/1:22,2:30:9.03:513,9,0	1/1:6,0:14:5.91:146,6,0
chr10	58581567	.	C	CT	27127.81	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=1.468;DP=775;FS=1.468;HRun=0;HaplotypeScore=94.8238;InbreedingCoeff=0.9968;MQ=87.74;MQ0=0;MQRankSum=-7.666;QD=43.75;ReadPosRankSum=3.802;VQSLOD=5.0277;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,35:36:99:1582,99,0	0/0:5,0:5:15.05:0,15,210	0/0:26,0:26:66.30:0,66,1018	0/0:28,0:28:75.11:0,75,1016	1/1:0,28:28:81.28:1294,81,0	1/1:1,17:18:48.16:767,48,0	1/1:2,24:26:60.20:959,60,0	0/0:30,0:30:87.28:0,87,1202	1/1:0,35:35:87.30:1391,87,0	1/1:1,29:30:87.30:1388,87,0	1/1:0,14:14:42.14:671,42,0	1/1:0,34:34:96.33:1533,96,0	1/1:1,27:28:75.26:1199,75,0	1/1:0,33:33:96.33:1535,96,0	1/1:0,33:33:93.32:1487,93,0	0/0:32,1:33:51.36:0,51,1295	0/0:33,0:33:99:0,99,1384	1/1:1,24:25:65.11:1053,65,0	1/1:1,21:22:66.18:976,66,0	1/1:0,25:25:69.24:1103,69,0	1/1:2,60:62:99:2781,174,0	1/1:0,27:27:72.25:1151,72,0	1/1:0,15:15:42.14:672,42,0	1/1:0,17:17:45.15:719,45,0	1/1:1,26:27:72.25:1151,72,0	1/1:1,33:34:99:1555,99,0	1/1:0,34:34:84.29:1343,84,0	1/1:0,17:17:51.17:815,51,0
chr10	58585110	.	T	TG	4703.30	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-10.596;DP=611;FS=9.096;HRun=8;HaplotypeScore=65.0759;InbreedingCoeff=0.9888;MQ=76.63;MQ0=0;MQRankSum=-1.176;QD=23.75;ReadPosRankSum=2.663;VQSLOD=5.4306;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:87.03:0,87,795	0/0:8,0:8:21:0,21,189	0/0:24,0:24:56.22:0,56,490	0/0:21,0:20:28.42:0,28,300	0/0:14,0:14:38.98:0,39,346	1/1:5,27:32:72.21:831,72,0	1/1:6,26:32:41.75:734,42,0	0/0:25,0:25:72.04:0,72,659	1/1:3,18:21:45.13:519,45,0	0/0:29,1:30:37.40:0,37,594	0/0:14,0:13:36.01:0,36,329	1/1:3,23:26:57.17:657,57,0	0/0:11,0:11:26.98:0,27,240	0/0:22,0:22:57.02:0,57,518	0/0:20,0:20:56.99:0,57,510	0/0:17,0:17:41.99:0,42,380	0/0:29,0:29:80.98:0,81,725	1/1:8,16:24:45.13:519,45,0	0/0:19,0:20:30.35:0,30,364	0/0:16,0:16:42.02:0,42,384	0/0:20,0:20:51.01:0,51,462	1/1:4,16:19:36.04:398,36,0	1/1:2,15:17:8.91:351,9,0	1/1:3,23:26:60.18:692,60,0	0/0:21,0:20:53.93:0,54,477	0/0:30,0:30:74.99:0,75,678	0/0:16,0:16:45.01:0,45,406	0/0:16,0:16:48.03:0,48,439
chr10	58585283	.	TAC	T	5305.19	PASS	AB=0.850;AC=39;AF=0.696;AN=56;BaseQRankSum=5.371;DP=641;FS=4.745;HRun=0;HaplotypeScore=142.5196;InbreedingCoeff=0.7342;MQ=50.95;MQ0=10;MQRankSum=-1.834;QD=12.11;ReadPosRankSum=1.511;VQSLOD=4.3291;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:95.80:0,96,1552	0/0:8,0:8:15.05:0,15,237	0/0:30,0:18:17.99:0,18,238	0/0:31,0:13:5.28:0,5,53	0/0:23,0:23:45.06:0,45,804	1/1:7,20:27:33.10:403,33,0	1/1:12,19:29:12.04:147,12,0	0/1:15,0:15:6.46:6,0,405	1/1:8,9:16:12.03:139,12,0	1/1:6,17:21:45.13:537,45,0	1/1:7,3:10:12.04:147,12,0	1/1:5,22:27:21.07:257,21,0	1/1:12,9:20:25.62:283,26,0	1/1:10,12:20:18.06:216,18,0	1/1:8,7:14:24.07:282,24,0	0/0:19,0:19:39.12:0,39,593	0/0:43,0:42:99:0,108,1689	0/1:21,10:29:14.41:406,0,14	1/1:8,7:15:23.92:265,24,0	1/1:4,12:18:17.89:197,18,0	1/1:21,24:41:35.98:439,36,0	1/1:4,19:23:6.02:73,6,0	1/1:4,5:9:12.04:146,12,0	1/1:11,9:17:18.01:202,18,0	1/1:4,13:16:24.08:292,24,0	0/1:17,6:21:1.23:319,0,1	1/1:9,6:15:21.06:255,21,0	1/1:1,10:10:24.08:293,24,0
chr10	58585324	.	GCA	G	96.61	PASS	AB=0.860;AC=13;AF=0.250;AN=52;BaseQRankSum=4.387;DP=632;FS=3.548;HRun=0;HaplotypeScore=154.0927;InbreedingCoeff=0.1069;MQ=36.14;MQ0=65;MQRankSum=-4.613;QD=0.42;ReadPosRankSum=0.068;VQSLOD=2.1183;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:31:53.68:0,54,694	0/0:10,0:9:18.06:0,18,292	./.	./.	0/1:18,1:19:2.08:2,0,446	0/0:24,4:24:2.91:0,3,21	0/1:33,6:30:31.17:34,0,31	0/0:23,0:20:51.03:0,51,657	0/0:23,1:23:3.19:0,3,64	0/0:34,0:26:21.97:0,22,136	1/1:9,0:9:0.47:1,0,0	1/1:22,7:27:3.51:27,4,0	0/1:27,1:22:32.89:42,0,33	0/0:36,1:31:4.29:0,4,19	0/0:10,0:9:5.98:0,6,47	0/0:19,0:18:27.03:0,27,474	0/0:43,0:41:76.60:0,77,1310	0/1:18,5:21:21.06:63,0,21	0/0:16,0:10:9.13:0,9,73	0/0:16,0:13:5.96:0,6,43	0/0:59,0:36:3.41:0,3,19	1/1:19,3:22:2.04:6,2,0	0/1:6,4:12:0:0,0,0	0/1:18,9:21:0:0,0,0	0/0:19,0:17:2.99:0,3,23	0/1:20,0:15:37.39:37,0,90	0/0:12,0:9:1.33:0,1,11	0/0:8,0:5:4.92:0,5,20
chr10	58585334	.	ACACG	A	652.98	PASS	AB=0.970;AC=30;AF=0.577;AN=52;BaseQRankSum=7.067;DP=639;FS=17.718;HRun=0;HaplotypeScore=160.4317;InbreedingCoeff=0.0655;MQ=33.93;MQ0=64;MQRankSum=-2.436;QD=1.32;ReadPosRankSum=-4.042;VQSLOD=0.3054;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:25:12.07:0,12,835	0/0:9,0:8:18.03:0,18,380	./.	./.	0/0:15,0:15:33.05:0,33,669	1/1:26,1:22:1.15:14,1,0	0/1:42,4:37:12.15:12,0,64	0/0:27,0:24:59.95:0,60,805	0/1:21,4:24:12.66:50,0,13	0/1:33,0:27:99:205,0,129	1/1:8,0:8:2.84:14,3,0	1/1:29,1:26:3.76:19,4,0	0/1:28,0:22:42.82:43,0,64	0/1:39,0:34:24.67:34,0,25	1/1:12,0:11:3.68:15,4,0	0/0:20,0:19:22.66:0,23,659	0/0:43,0:40:79.29:0,79,1895	0/1:25,0:24:49.01:49,0,103	0/1:23,0:14:53.48:53,0,91	1/1:13,0:11:3:25,3,0	1/1:56,0:31:7.14:49,7,0	1/1:21,2:22:2.99:25,3,0	1/1:14,1:15:2.90:16,3,0	0/1:28,2:21:0:0,0,0	1/1:19,0:16:5.99:50,6,0	0/1:21,0:16:33.41:33,0,131	0/1:12,0:9:9.23:50,0,9	1/1:7,0:5:5.43:54,5,0
chr10	58585336	.	ACG	A	861.31	PASS	AB=0.946;AC=32;AF=0.615;AN=52;BaseQRankSum=8.264;DP=632;FS=30.925;HRun=0;HaplotypeScore=146.0835;InbreedingCoeff=0.2365;MQ=33.18;MQ0=64;MQRankSum=-4.033;QD=1.75;ReadPosRankSum=-2.640;VQSLOD=0.6592;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:25:12.07:0,12,662	0/0:9,0:8:18.03:0,18,272	./.	./.	0/0:13,0:13:19.59:0,20,496	1/1:27,0:22:1.40:28,1,0	0/1:48,0:39:34.66:35,0,46	0/0:27,0:24:59.92:0,60,751	0/1:27,0:26:12.38:12,0,15	0/1:28,4:27:34.27:200,0,34	1/1:6,2:8:3:25,3,0	1/1:30,0:26:5.31:29,5,0	0/1:20,6:21:0.25:82,0,0	1/1:32,7:34:7.95:46,8,0	1/1:13,1:13:1.77:5,2,0	0/0:21,0:20:22.48:0,22,516	0/0:38,0:35:65.97:0,66,1384	0/1:25,0:24:55.70:125,0,56	0/1:25,0:15:16.49:16,0,45	1/1:11,0:9:3:25,3,0	1/1:46,7:29:6.44:47,6,0	1/1:23,0:22:2.99:25,3,0	1/1:15,0:15:2.92:17,3,0	0/1:31,0:22:0:0,0,0	1/1:16,3:16:5.89:50,6,0	0/1:17,3:14:41.57:104,0,42	1/1:12,0:9:14.48:89,14,0	1/1:7,0:5:11.40:65,11,0
chr10	58585338	.	GCA	G	80.16	PASS	AB=0.989;AC=15;AF=0.300;AN=50;BaseQRankSum=4.338;DP=623;FS=14.615;HRun=0;HaplotypeScore=143.3998;InbreedingCoeff=0.1316;MQ=32.51;MQ0=63;MQRankSum=-6.116;QD=0.32;ReadPosRankSum=-0.915;VQSLOD=2.0569;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:23:33.11:0,33,557	0/0:9,0:8:14.98:0,15,218	./.	./.	0/0:12,0:12:32.66:0,33,447	0/0:27,1:23:0.94:0,1,10	0/1:49,0:41:0.37:0,0,46	0/0:27,0:23:51.03:0,51,716	0/1:24,1:26:6.25:6,0,13	0/1:33,0:26:16.45:16,0,138	1/1:8,0:8:0.47:1,0,0	0/0:29,1:27:2.04:0,2,7	0/1:26,0:21:11.87:12,0,80	0/0:38,0:34:0.92:0,1,11	0/0:13,0:12:2.98:0,3,23	0/0:19,0:18:27.09:0,27,456	0/0:39,0:36:83.04:0,83,1250	0/1:23,1:23:58.29:58,0,154	0/0:24,0:14:17.96:0,18,146	./.	0/0:52,2:30:2.93:0,3,18	0/0:22,1:21:0.47:0,0,1	1/1:11,2:14:0.47:1,0,0	0/1:31,0:22:0:0,0,0	0/0:18,0:15:0:0,0,0	0/1:19,0:14:45.74:46,0,104	1/1:11,0:8:3.87:47,4,0	1/1:7,0:5:2.12:5,2,0
chr10	58585342	.	A	ACG	320.07	PASS	AB=0.908;AC=15;AF=0.300;AN=50;BaseQRankSum=4.328;DP=618;FS=9.444;HRun=0;HaplotypeScore=141.6501;InbreedingCoeff=0.1012;MQ=32.15;MQ0=57;MQRankSum=-3.858;QD=1.13;ReadPosRankSum=-3.353;VQSLOD=0.8243;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:23:32.62:0,33,533	0/0:9,0:8:18.04:0,18,248	./.	./.	0/0:14,0:14:39.07:0,39,509	0/1:28,0:23:1.83:22,0,2	0/0:51,0:42:6.49:0,6,90	0/0:24,0:21:54.01:0,54,700	0/1:27,0:27:9.09:12,0,9	0/1:29,2:25:99:130,0,264	1/1:8,0:8:3:25,3,0	0/0:31,0:29:2.75:0,3,28	0/0:23,2:20:18.69:0,19,134	0/1:33,2:33:13.46:50,0,13	0/0:12,2:12:2.98:0,3,21	0/0:20,0:19:33.05:0,33,446	0/0:40,0:37:99:0,99,1327	0/0:24,0:23:18.86:0,19,381	0/1:19,2:13:91.15:91,0,130	./.	1/1:57,1:31:2.53:13,3,0	0/0:23,0:21:2.98:0,3,22	1/1:14,0:14:0.47:1,0,0	0/1:29,0:22:0.03:0,0,0	0/1:14,3:15:0:0,0,0	0/0:20,0:15:3.27:0,3,197	0/1:6,1:7:27.64:47,0,28	0/1:4,0:4:11.97:58,0,12
chr10	58585348	.	ACG	A	548.30	PASS	AB=0.963;AC=23;AF=0.479;AN=48;BaseQRankSum=6.093;DP=617;FS=0.649;HRun=0;HaplotypeScore=123.8049;InbreedingCoeff=0.1538;MQ=31.61;MQ0=52;MQRankSum=-6.759;QD=1.37;ReadPosRankSum=-4.258;VQSLOD=1.0635;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:21:1.78:0,2,581	0/0:8,0:7:8.03:0,8,192	./.	./.	0/0:15,0:14:35.94:0,36,493	1/1:26,0:23:2.60:12,3,0	0/0:47,0:39:3.96:0,4,61	0/0:21,0:18:45.14:0,45,781	1/1:27,0:26:0.80:3,1,0	0/1:25,2:21:88.74:152,0,89	./.	0/1:34,0:30:1.72:7,0,2	0/1:25,1:22:10:10,0,87	0/1:32,6:34:6.44:32,0,6	1/1:13,2:13:0.89:3,1,0	0/0:21,0:19:33.10:0,33,526	0/0:39,0:36:99:0,101,1461	0/1:23,0:21:31.66:32,0,196	0/1:20,1:12:59.04:59,0,118	./.	1/1:63,1:39:3:26,3,0	0/1:21,0:17:0:0,0,0	1/1:15,0:15:0.89:2,1,0	0/1:28,0:21:0:0,0,0	0/0:16,2:14:0:0,0,0	0/1:21,1:18:84.56:182,0,85	1/1:6,2:7:11.72:119,12,0	1/1:4,0:2:5.95:41,6,0
chr10	58585352	.	A	ACG	50.75	PASS	AB=0.908;AC=7;AF=0.146;AN=48;BaseQRankSum=5.570;DP=614;FS=0.000;HRun=0;HaplotypeScore=122.0490;InbreedingCoeff=0.1826;MQ=31.82;MQ0=50;MQRankSum=-5.374;QD=0.32;ReadPosRankSum=-0.120;VQSLOD=2.3149;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:23:38.04:0,38,546	0/0:7,0:7:15.01:0,15,184	./.	./.	0/0:14,0:13:36.09:0,36,507	0/0:25,0:22:2.44:0,2,7	0/0:48,0:40:6.01:0,6,72	0/0:22,0:18:54.11:0,54,738	0/0:24,0:23:1.57:0,2,24	0/1:22,4:21:96.23:96,0,167	./.	1/1:33,0:31:3.51:13,4,0	0/1:22,4:22:28.31:28,0,79	0/1:34,6:36:9.46:9,0,35	0/0:12,1:11:0:0,0,0	0/0:23,0:21:39.05:0,39,526	0/0:41,0:38:85.16:0,85,1396	0/0:22,0:20:36.13:0,36,337	0/1:20,0:11:5.78:6,0,162	./.	0/0:56,7:38:2.99:0,3,25	0/0:21,0:15:0:0,0,0	0/0:15,0:15:0.89:0,1,2	0/0:27,0:20:0:0,0,0	0/1:14,1:11:0:0,0,0	0/0:22,1:20:9.47:0,9,223	0/0:6,0:5:8.50:0,8,64	0/0:3,0:2:3.47:0,3,10
chr10	58585360	.	GCA	G	119.49	PASS	AB=0.898;AC=8;AF=0.182;AN=44;BaseQRankSum=3.945;DP=604;FS=1.089;HRun=0;HaplotypeScore=100.4193;InbreedingCoeff=0.2231;MQ=31.37;MQ0=43;MQRankSum=-4.241;QD=0.80;ReadPosRankSum=-0.961;VQSLOD=1.9618;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:18:14.88:0,15,460	0/0:6,0:6:6.02:0,6,106	./.	0/0:13,1:2:5.98:0,6,59	0/0:12,0:11:27.09:0,27,469	0/1:18,8:23:0.24:0,0,0	0/0:29,12:36:2.81:0,3,53	0/0:24,0:20:48.16:0,48,824	0/0:18,4:21:5.56:0,6,50	0/0:27,0:21:44.57:0,45,411	./.	1/1:25,10:32:7.95:51,8,0	0/1:25,0:22:1.36:1,0,169	0/0:38,0:35:11.71:0,12,152	0/0:9,0:9:0:0,0,0	0/0:25,0:21:39.12:0,39,648	0/0:40,0:36:99:0,99,1652	0/1:14,8:20:99:147,0,149	0/1:19,0:11:14.71:15,0,75	./.	0/0:65,0:43:3:0,3,40	./.	0/1:14,2:16:0:0,0,0	./.	0/0:15,0:11:0:0,0,0	0/0:17,0:18:32.09:0,32,458	0/1:5,0:4:7.11:7,0,43	./.
chr10	58585366	.	ACG	A	111.07	PASS	AB=0.948;AC=12;AF=0.250;AN=48;BaseQRankSum=5.830;DP=612;FS=3.141;HRun=0;HaplotypeScore=102.6181;InbreedingCoeff=0.2289;MQ=31.02;MQ0=41;MQRankSum=-4.110;QD=0.61;ReadPosRankSum=-0.652;VQSLOD=1.8120;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:16:11.75:0,12,462	0/0:5,0:5:6.02:0,6,113	0/0:16,0:2:2.94:0,3,18	0/0:22,0:5:11.34:0,11,88	0/0:11,0:10:27.08:0,27,481	1/1:26,1:23:0.23:2,0,0	0/0:39,0:34:4.90:0,5,71	0/0:24,0:19:50.96:0,51,873	0/0:22,1:22:9.29:0,9,54	0/0:30,0:23:22.47:0,22,392	./.	1/1:32,4:33:7.08:36,7,0	0/1:25,0:21:16.73:17,0,120	0/0:35,0:33:12.64:0,13,152	0/1:11,0:9:0:0,0,0	0/0:25,0:21:42.10:0,42,688	0/0:43,0:38:82.42:0,82,1709	0/1:23,0:21:96.22:124,0,96	0/1:11,1:5:31.62:32,0,116	./.	0/0:64,0:47:4.96:0,5,64	./.	1/1:13,3:16:1.25:3,1,0	0/1:25,1:21:0:0,0,0	0/0:16,0:12:0:0,0,0	0/0:22,0:19:21.63:0,22,515	0/1:4,1:4:12.53:13,0,61	./.
chr10	58585382	.	G	GCA	325.37	PASS	AB=0.908;AC=20;AF=0.400;AN=50;BaseQRankSum=6.115;DP=608;FS=2.861;HRun=0;HaplotypeScore=121.4865;InbreedingCoeff=0.0915;MQ=31.55;MQ0=30;MQRankSum=-5.903;QD=1.03;ReadPosRankSum=-2.934;VQSLOD=1.8287;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:20:35.53:0,36,406	0/0:4,0:4:3.01:0,3,39	0/0:16,0:2:5.88:0,6,53	0/0:27,0:5:15.05:0,15,184	0/0:12,0:11:20.93:0,21,242	1/1:20,5:22:0.02:23,0,0	0/0:27,1:26:3:0,3,27	0/0:20,0:16:36.10:0,36,442	1/1:20,3:23:2.07:44,2,0	0/1:22,0:22:71.50:111,0,72	./.	0/1:28,6:33:3.83:16,0,4	1/1:21,0:17:1.24:4,1,0	0/1:33,0:35:19.26:19,0,31	1/1:14,0:12:0.40:1,0,0	0/0:19,0:17:30.08:0,30,370	0/0:38,0:35:76.79:0,77,1104	0/1:26,2:26:99:135,0,104	0/1:12,0:7:9.98:10,0,52	./.	0/0:64,0:53:5.85:0,6,42	0/1:18,4:17:0.10:0,0,0	0/1:14,3:17:0.01:0,0,0	0/1:19,2:16:0:0,0,0	./.	0/1:18,0:17:22.62:23,0,106	0/1:9,0:9:14.60:48,0,15	1/1:4,0:4:2.97:20,3,0
chr10	58585385	.	CACACACAT	C	140.99	PASS	AB=1.000;AC=17;AF=0.327;AN=52;BaseQRankSum=5.763;DP=606;FS=5.133;HRun=0;HaplotypeScore=141.3624;InbreedingCoeff=0.1867;MQ=31.86;MQ0=29;MQRankSum=-4.827;QD=0.61;ReadPosRankSum=-2.578;VQSLOD=1.2470;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:21:43.12:0,43,1083	0/0:4,0:4:3.01:0,3,81	0/0:16,0:2:6.01:0,6,84	0/0:28,0:5:14.72:0,15,183	0/0:13,0:12:23.95:0,24,642	1/1:22,1:20:0.45:2,0,0	0/0:26,2:26:6.02:0,6,66	0/0:21,0:17:45.15:0,45,1020	0/0:20,1:21:6.96:0,7,44	0/1:25,0:21:59.87:60,0,180	0/1:11,0:10:0:0,0,0	1/1:35,2:34:5.11:90,5,0	0/0:22,0:17:1.37:0,1,6	0/1:38,0:35:10.06:10,0,86	0/0:15,0:12:2.04:0,2,7	0/0:19,0:17:30.10:0,30,949	0/0:40,0:36:99:0,104,3058	0/0:28,0:26:12.43:0,12,237	0/1:12,0:8:10.84:11,0,95	./.	0/0:71,0:55:5.39:0,5,175	1/1:19,0:15:0.37:1,0,0	1/1:16,0:16:0.47:1,0,0	0/1:20,0:16:0:0,0,0	./.	0/1:17,0:15:25.91:26,0,319	0/1:9,0:9:36.76:37,0,75	1/1:4,0:4:3.47:28,3,0
chr10	58585387	.	CACACAT	C	76.80	PASS	AB=0.995;AC=13;AF=0.250;AN=52;BaseQRankSum=5.682;DP=592;FS=4.702;HRun=0;HaplotypeScore=131.3751;InbreedingCoeff=0.1361;MQ=32.09;MQ0=28;MQRankSum=-4.996;QD=0.37;ReadPosRankSum=-4.116;VQSLOD=0.9708;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,1:20:42.38:0,42,1015	0/0:4,0:4:3.01:0,3,92	0/0:16,0:2:6.02:0,6,94	0/0:28,0:5:14.91:0,15,192	0/0:13,0:12:24.01:0,24,576	0/0:21,0:18:0.39:0,0,1	0/0:24,0:22:5.96:0,6,66	0/0:21,0:17:45.11:0,45,1037	0/1:19,0:19:14.87:15,0,16	0/1:25,1:22:59.87:60,0,203	0/1:10,0:9:0:0,0,0	1/1:37,0:34:4.17:33,4,0	0/1:22,0:17:0.81:17,0,1	0/1:37,0:34:24.83:25,0,73	0/0:14,1:12:1.55:0,2,4	0/0:18,0:16:30.07:0,30,822	0/0:42,0:38:99:0,110,2726	0/0:28,0:26:0.82:0,1,240	0/1:12,0:8:7.86:8,0,76	./.	0/0:69,4:56:5.44:0,5,153	1/1:18,0:15:0.47:1,0,0	1/1:12,0:12:1.36:3,1,0	0/0:19,0:15:0:0,0,0	./.	0/1:17,0:15:33.65:34,0,279	0/0:9,0:9:4.28:0,4,99	0/0:4,0:4:0.55:0,1,2
chr10	58585391	.	CAT	C	460.26	PASS	AB=0.946;AC=17;AF=0.327;AN=52;BaseQRankSum=7.005;DP=561;FS=7.420;HRun=0;HaplotypeScore=109.1589;InbreedingCoeff=0.1341;MQ=32.78;MQ0=27;MQRankSum=-6.864;QD=1.93;ReadPosRankSum=-3.572;VQSLOD=0.5730;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:20:41.87:0,42,658	0/0:4,0:4:3.01:0,3,58	0/0:17,0:2:6.01:0,6,81	0/0:30,0:6:11.09:0,11,166	0/0:11,0:10:17.06:0,17,342	1/1:18,0:16:2.71:28,3,0	0/0:19,2:20:5.69:0,6,35	0/0:21,0:18:51.06:0,51,704	1/1:11,4:15:7.36:59,7,0	0/1:24,1:20:88.40:88,0,107	0/0:9,1:9:0:0,0,0	1/1:30,3:30:2.72:9,3,0	0/1:21,1:19:6.09:13,0,6	0/1:31,1:30:16.06:16,0,35	0/0:13,0:11:0.88:0,1,2	0/0:17,0:16:30.07:0,30,507	0/0:46,0:42:99:0,107,1662	0/1:22,3:23:30.41:213,0,30	0/1:13,0:9:41.39:41,0,56	./.	0/0:67,2:54:6.19:0,6,47	0/1:14,2:13:0:0,0,0	0/1:9,2:11:0.10:0,0,0	0/0:15,2:13:0:0,0,0	./.	0/1:14,0:12:55.36:55,0,146	0/1:10,0:9:18.90:57,0,19	1/1:4,0:4:3.37:17,3,0
chr10	58585400	.	ACG	A	279.01	PASS	AB=0.998;AC=17;AF=0.327;AN=52;BaseQRankSum=7.603;DP=570;FS=15.062;HRun=0;HaplotypeScore=115.1681;InbreedingCoeff=-0.0442;MQ=32.30;MQ0=35;MQRankSum=-6.469;QD=1.03;ReadPosRankSum=-1.664;VQSLOD=1.1459;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,1:21:31.20:0,31,658	0/0:4,0:4:5.96:0,6,45	0/0:18,0:2:5.17:0,5,20	0/0:33,0:5:4.40:0,4,62	0/0:11,0:11:21.03:0,21,359	1/1:17,0:15:5.70:51,6,0	0/1:24,0:21:8.15:8,0,34	0/0:20,0:16:44.87:0,45,711	0/1:17,0:17:5.19:55,0,5	0/1:21,0:19:51.46:51,0,228	0/0:10,0:9:0:0,0,0	0/1:31,1:29:2.71:3,0,11	0/0:19,1:16:2.82:0,3,14	0/1:31,0:28:24.36:24,0,67	1/1:11,0:10:0.80:2,1,0	0/0:14,0:13:29.91:0,30,438	0/0:43,0:40:99:0,107,1882	0/1:24,0:22:87.56:88,0,138	0/1:20,0:11:20.54:21,0,110	./.	0/0:78,0:60:6.21:0,6,110	0/1:16,0:14:0:0,0,0	0/1:10,0:10:0.10:0,0,0	0/1:20,0:15:0:0,0,0	./.	0/1:15,0:11:28.81:29,0,229	0/1:10,0:9:42.47:64,0,42	0/1:4,0:4:12.39:12,0,15
chr10	58585402	.	GCA	G	398.18	PASS	AB=0.759;AC=16;AF=0.308;AN=52;BaseQRankSum=6.385;DP=549;FS=5.447;HRun=0;HaplotypeScore=113.7696;InbreedingCoeff=-0.0924;MQ=32.61;MQ0=35;MQRankSum=-4.427;QD=1.55;ReadPosRankSum=-1.077;VQSLOD=1.4810;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,1:23:43.88:0,44,648	0/0:4,0:4:3.01:0,3,44	0/0:18,0:2:2.92:0,3,17	0/0:32,0:5:6.02:0,6,90	0/0:10,0:10:21.07:0,21,330	1/1:10,7:15:4.48:23,4,0	0/1:16,7:21:13.62:54,0,14	0/0:18,0:15:42.14:0,42,677	0/1:11,4:15:17.81:52,0,18	0/1:16,3:17:65.65:66,0,239	0/0:7,2:8:0:0,0,0	0/1:20,10:27:1.25:1,0,34	0/0:15,6:17:5.46:0,5,38	0/1:23,4:25:36.32:36,0,68	0/1:4,5:8:0.01:0,0,0	0/0:13,1:13:27.06:0,27,401	0/0:43,0:40:99:0,107,1694	0/1:15,8:21:70.23:70,0,140	0/1:19,2:12:47:47,0,124	./.	0/0:55,17:55:6.21:0,6,67	0/1:9,7:14:0:0,0,0	0/1:3,6:9:0.10:0,0,0	0/1:13,6:14:0:0,0,0	./.	0/1:14,2:12:32.79:33,0,210	0/1:4,4:7:26.83:103,0,27	0/1:2,2:4:31.55:40,0,32
chr10	58585414	.	GCA	G	356.16	PASS	AB=0.813;AC=14;AF=0.259;AN=54;BaseQRankSum=4.900;DP=539;FS=4.126;HRun=0;HaplotypeScore=130.3385;InbreedingCoeff=0.2069;MQ=33.37;MQ0=30;MQRankSum=-3.719;QD=1.89;ReadPosRankSum=0.346;VQSLOD=2.2344;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:22:37.94:0,38,623	0/0:3,0:3:3.01:0,3,52	0/0:13,0:1:3.01:0,3,40	0/0:25,0:2:3.01:0,3,52	0/0:10,0:10:21.02:0,21,268	1/1:7,9:14:5.72:70,6,0	1/1:13,7:17:3.89:100,4,0	0/0:21,0:17:48.14:0,48,742	0/1:6,8:15:0.90:116,0,1	0/0:19,0:17:11.22:0,11,166	0/0:11,0:10:0:0,0,0	0/1:16,12:26:9.18:9,0,18	0/0:23,0:21:2.35:0,2,26	0/1:25,0:24:6.36:6,0,46	0/1:10,0:9:0.01:0,0,0	0/0:15,0:15:30.61:0,31,500	0/0:42,0:39:99:0,104,1674	0/1:9,13:21:89.13:153,0,89	0/0:20,0:12:3.72:0,4,276	./.	0/0:69,0:54:6.04:0,6,100	1/1:5,7:11:2.98:21,3,0	0/1:2,10:12:0.10:0,0,0	0/0:9,12:18:0.21:0,0,1	0/0:17,0:15:3.01:0,3,33	0/1:16,0:13:3.33:3,0,200	0/1:8,0:8:3.63:4,0,60	0/0:4,0:4:7.21:0,7,64
chr10	58585429	.	CACAG	C	729.66	PASS	AB=0.972;AC=23;AF=0.411;AN=56;BaseQRankSum=6.767;DP=530;FS=3.089;HRun=0;HaplotypeScore=137.6554;InbreedingCoeff=0.0766;MQ=39.36;MQ0=22;MQRankSum=-5.938;QD=2.24;ReadPosRankSum=-0.979;VQSLOD=2.4587;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:22:3.63:0,4,382	0/0:2,0:2:3.01:0,3,81	0/1:16,0:4:1.94:2,0,149	0/0:29,0:6:7.84:0,8,87	0/0:8,0:8:10.09:0,10,124	0/1:16,0:16:15.67:16,0,30	0/1:21,0:18:7.39:7,0,50	0/0:21,0:19:51.17:0,51,1107	0/1:17,0:16:38.76:47,0,39	0/1:14,0:12:10.86:78,0,11	0/1:10,1:10:0.15:0,0,0	0/1:25,0:24:31.45:31,0,108	1/1:20,1:17:8.51:98,9,0	1/1:20,1:18:5.03:54,5,0	1/1:11,0:10:5.96:46,6,0	0/0:18,0:18:29.32:0,29,1004	0/0:42,0:42:99:0,116,2728	0/1:20,0:20:53.80:54,0,152	0/1:16,1:12:45.02:90,0,45	0/0:3,0:3:0.47:0,0,1	1/1:59,5:51:1.85:23,2,0	0/0:13,0:12:8.57:0,9,99	0/0:14,0:14:2.93:0,3,44	0/0:26,0:23:3.71:0,4,22	1/1:19,1:16:8.92:110,9,0	0/1:13,2:12:59.87:117,0,60	1/1:11,0:10:13.87:104,14,0	0/1:4,0:3:12.53:13,0,13
chr10	58585431	.	CAG	C	810.34	PASS	AB=0.960;AC=26;AF=0.481;AN=54;BaseQRankSum=6.563;DP=517;FS=2.063;HRun=0;HaplotypeScore=128.2769;InbreedingCoeff=-0.0556;MQ=39.71;MQ0=19;MQRankSum=-4.259;QD=2.25;ReadPosRankSum=-1.032;VQSLOD=2.5674;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:27,1:22:21.92:22,0,163	0/0:2,0:2:3.01:0,3,58	0/0:18,0:4:3.44:0,3,113	0/0:29,0:6:7.63:0,8,76	0/1:5,2:7:50.68:72,0,51	0/1:16,1:16:8.49:41,0,8	1/1:20,1:18:12.29:53,12,0	0/0:19,0:18:51.13:0,51,790	0/1:16,1:16:8.84:56,0,9	0/1:13,0:11:13.66:69,0,14	0/0:11,0:10:0:0,0,0	0/1:23,2:23:37.13:37,0,41	1/1:18,0:16:6.36:37,6,0	1/1:21,0:18:5.18:43,5,0	1/1:10,1:10:8.88:70,9,0	0/0:18,0:18:29.28:0,29,737	0/0:41,0:42:99:0,105,2024	0/1:20,0:20:50.24:132,0,50	0/1:15,0:12:26.58:81,0,27	./.	1/1:59,0:48:2.38:23,2,0	1/1:12,1:12:2.45:6,2,0	0/0:14,0:14:2.69:0,3,20	0/1:24,1:22:13.19:17,0,13	0/1:19,0:15:7.32:37,0,7	0/1:15,0:11:41.38:96,0,41	1/1:11,0:10:7.66:64,8,0	0/1:4,0:3:10.41:10,0,12
chr10	58587948	.	C	CTG	1486.49	PASS	AB=0.857;AC=35;AF=0.729;AN=48;BaseQRankSum=0.774;DP=576;FS=0.000;HRun=0;HaplotypeScore=96.0356;InbreedingCoeff=0.1197;MQ=61.48;MQ0=13;MQRankSum=-1.141;QD=3.39;ReadPosRankSum=-1.474;VQSLOD=2.1424;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:36,0:34:5.17:50,5,0	./.	./.	./.	1/1:20,0:19:5.75:55,6,0	1/1:28,0:28:14.04:127,14,0	1/1:22,0:22:8.35:45,8,0	0/0:25,0:24:1.08:0,1,29	1/1:16,0:16:8.81:58,9,0	0/1:20,0:20:1.69:57,0,2	./.	1/1:19,0:19:20.99:190,21,0	1/1:10,2:13:3.01:45,3,0	1/1:21,0:21:6.01:69,6,0	1/1:11,0:11:3.01:43,3,0	0/0:20,0:20:15.03:0,15,161	0/0:21,0:26:6.03:0,6,95	1/1:25,0:25:17.91:137,18,0	1/1:19,0:17:3:28,3,0	0/1:14,4:18:6.82:39,0,7	0/1:26,8:34:46.35:160,0,46	1/1:17,0:16:3:25,3,0	0/1:9,0:9:0:0,0,0	1/1:36,0:34:13.17:97,13,0	0/1:20,5:25:23.08:80,0,23	1/1:15,6:21:15.46:158,15,0	0/1:11,3:15:19.20:123,0,19	0/1:8,4:12:26.49:39,0,26
chr10	58587981	.	T	TGTGTGC	2131.89	PASS	AB=0.771;AC=15;AF=0.268;AN=56;BaseQRankSum=0.781;DP=544;FS=7.089;HRun=0;HaplotypeScore=105.7618;InbreedingCoeff=0.4516;MQ=56.09;MQ0=12;MQRankSum=-1.295;QD=9.07;ReadPosRankSum=4.496;VQSLOD=1.2123;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:35,0:33:38.39:38,0,166	0/0:7,0:7:17.98:0,18,149	0/0:28,0:14:33.03:0,33,338	0/0:27,0:17:37.44:0,37,406	0/1:19,0:17:47.68:48,0,122	1/1:21,0:22:7.91:421,8,0	1/1:3,21:29:0.15:192,0,0	0/0:19,0:18:41.56:0,42,375	0/1:5,6:13:11.88:228,0,12	0/0:15,0:14:28.58:0,29,267	0/0:7,0:7:11.99:0,12,100	1/1:3,17:23:6.92:518,7,0	0/0:17,0:17:38.58:0,39,289	0/0:17,0:16:35.37:0,35,281	0/0:12,0:12:8.76:0,9,181	0/0:18,0:18:42.02:0,42,554	0/0:27,0:27:69.61:0,70,686	0/1:7,1:25:4.96:372,0,5	0/0:7,0:6:13.25:0,13,111	0/0:11,0:11:14.73:0,15,126	0/0:23,0:23:37.94:0,38,347	0/1:9,9:18:14.18:97,0,14	1/1:13,0:13:6.84:47,7,0	1/1:14,1:34:18.02:339,18,0	0/0:25,0:25:46.56:0,47,366	0/0:19,0:19:40.49:0,40,298	0/0:19,0:19:46.94:0,47,378	0/0:11,0:11:20.71:0,21,199
chr10	58588580	.	C	CTT	3714.51	PASS	AB=0.810;AC=41;AF=0.732;AN=56;BaseQRankSum=3.889;DP=440;FS=16.531;HRun=14;HaplotypeScore=63.8988;InbreedingCoeff=0.5336;MQ=76.22;MQ0=3;MQRankSum=-2.470;QD=10.77;ReadPosRankSum=1.320;VQSLOD=0.8053;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:26:37.02:0,37,360	0/1:7,0:8:0.34:0,0,133	0/1:23,0:14:3.39:3,0,4	0/0:21,0:11:7.66:0,8,37	0/0:13,0:15:23.05:0,23,225	0/1:6,11:20:9.17:143,0,9	1/1:3,7:11:6.02:79,6,0	0/1:25,2:29:23.12:23,0,171	1/1:1,13:16:11.40:126,11,0	1/1:16,0:15:27.68:200,28,0	1/1:14,0:14:35.91:298,36,0	1/1:6,10:18:3.21:41,3,0	1/1:17,0:17:38.96:344,39,0	1/1:11,0:11:24.35:214,24,0	1/1:15,0:15:30.42:250,30,0	0/0:12,0:15:5.29:0,5,205	0/0:17,0:18:33.78:0,34,258	1/1:3,17:22:25.81:290,26,0	1/1:16,0:16:13.05:123,13,0	1/1:12,0:12:20.31:205,20,0	1/1:10,1:11:17.97:159,18,0	1/1:1,7:10:22.76:217,23,0	1/1:4,9:15:20.01:203,20,0	0/1:4,10:14:13.20:106,0,13	1/1:17,0:17:41.87:329,42,0	1/1:13,0:13:14.85:102,15,0	1/1:14,0:14:28.29:236,28,0	1/1:3,0:3:2.99:23,3,0
chr10	58588582	.	T	TTC	5432.56	PASS	AB=1.000;AC=31;AF=0.554;AN=56;BaseQRankSum=-5.893;DP=454;FS=12.652;HRun=0;HaplotypeScore=63.4525;InbreedingCoeff=0.4364;MQ=77.49;MQ0=3;MQRankSum=1.234;QD=19.97;ReadPosRankSum=6.213;VQSLOD=3.9572;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:75:0,75,905	0/0:8,0:8:22.31:0,22,300	0/0:26,0:16:26.99:0,27,210	0/0:22,0:11:4.10:0,4,95	0/0:18,0:18:41.97:0,42,523	0/1:20,0:20:20.22:20,0,136	0/1:10,0:10:14.20:14,0,44	0/0:28,0:28:53.15:0,53,671	0/1:17,0:17:25.49:30,0,25	1/1:2,14:15:41.99:548,42,0	1/1:1,13:14:39.04:564,39,0	0/0:19,0:19:5.31:0,5,106	1/1:3,15:18:26.89:591,27,0	1/1:3,8:12:29.84:412,30,0	1/1:1,14:15:32.94:491,33,0	0/0:15,0:15:43.54:0,44,532	0/0:20,0:20:53.55:0,54,631	0/1:23,0:23:49.96:50,0,83	1/1:2,14:16:47.93:540,48,0	1/1:4,8:12:18.39:370,18,0	1/1:1,7:9:18.04:263,18,0	0/1:10,0:10:24.81:27,0,25	0/1:16,0:16:15.75:16,0,132	0/1:15,0:15:19.74:20,0,74	1/1:0,18:18:42.14:669,42,0	1/1:3,10:13:23.91:326,24,0	1/1:3,11:15:29.34:435,29,0	1/1:0,3:3:3.01:48,3,0
chr10	58588583	.	T	TC	2110.95	PASS	AB=0.929;AC=22;AF=0.393;AN=56;BaseQRankSum=3.533;DP=451;FS=1.901;HRun=0;HaplotypeScore=63.6509;InbreedingCoeff=0.7947;MQ=77.52;MQ0=3;MQRankSum=-1.272;QD=13.28;ReadPosRankSum=5.689;VQSLOD=4.5514;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:71.99:0,72,827	0/0:8,0:8:22.30:0,22,276	0/0:26,1:16:12.51:0,13,167	0/0:21,0:11:0.84:0,1,108	0/0:18,0:18:45.51:0,46,526	0/0:19,0:19:26.76:0,27,215	0/0:10,0:10:11.87:0,12,90	0/0:28,0:28:70.38:0,70,723	0/0:17,0:17:15.03:0,15,98	1/1:16,0:15:33.95:251,34,0	1/1:13,1:14:38.09:234,38,0	0/0:18,0:18:23.84:0,24,190	1/1:18,0:18:28.62:203,29,0	1/1:12,1:13:6.01:153,6,0	1/1:14,1:15:32.25:210,32,0	0/0:16,0:16:41.11:0,41,468	0/0:19,0:19:57.03:0,57,632	0/0:23,0:23:32.30:0,32,202	1/1:15,1:16:44.02:371,44,0	0/1:10,2:12:6.24:184,0,6	1/1:9,0:9:10.57:89,11,0	0/0:10,0:10:17.08:0,17,104	0/0:16,0:16:33.79:0,34,230	0/0:15,0:15:23.74:0,24,180	1/1:16,0:16:40.94:242,41,0	0/1:11,0:11:3.74:160,0,4	1/1:14,2:16:29.04:204,29,0	1/1:3,0:3:2.92:17,3,0
chr10	58588667	.	GA	G	1505.46	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.159;DP=500;FS=3.266;HRun=7;HaplotypeScore=56.7114;InbreedingCoeff=0.9892;MQ=81.98;MQ0=0;MQRankSum=-2.305;QD=25.09;ReadPosRankSum=2.768;VQSLOD=4.3863;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,40:41:99:1107,110,0	0/0:5,0:5:15:0,15,146	0/0:21,0:19:43.68:0,44,522	0/0:21,1:22:43.56:0,44,494	1/1:0,19:19:51.11:520,51,0	0/0:16,0:16:48.14:0,48,590	0/0:16,0:16:48.13:0,48,578	0/0:21,0:21:51.15:0,51,618	0/0:10,0:10:24.07:0,24,290	0/0:25,0:25:69.22:0,69,865	0/0:14,0:14:39.12:0,39,491	0/0:22,0:22:60.17:0,60,730	0/0:13,0:13:36.12:0,36,452	0/0:20,0:20:60.18:0,60,741	0/0:15,0:15:36.12:0,36,453	0/0:16,0:16:48.15:0,48,604	0/0:29,0:29:81.17:0,81,959	0/0:28,0:28:75.24:0,75,944	0/0:22,0:22:54.17:0,54,679	0/0:10,0:10:30.05:0,30,359	0/0:11,0:11:30.07:0,30,352	0/0:12,0:12:30.10:0,30,377	0/0:13,0:13:39.12:0,39,490	0/0:15,0:15:45.13:0,45,554	0/0:15,0:15:42.13:0,42,528	0/0:25,0:25:75.17:0,75,901	0/0:15,0:15:42.13:0,42,528	0/0:9,0:9:27.09:0,27,340
chr10	58588989	.	GAAGCTTATTAAGA	G	9627.84	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=13.228;DP=450;FS=54.840;HRun=0;HaplotypeScore=165.8082;InbreedingCoeff=0.9401;MQ=94.91;MQ0=0;MQRankSum=-12.089;QD=74.63;ReadPosRankSum=4.407;VQSLOD=2.7035;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:72.25:0,72,4358	0/0:5,0:5:15.05:0,15,913	0/0:22,0:23:66.20:0,66,2980	0/0:30,0:30:72.25:0,72,3659	0/0:7,0:7:18.06:0,18,1174	0/0:15,0:15:45.15:0,45,2327	0/0:25,0:25:69.24:0,69,4071	0/0:25,0:25:72.25:0,72,3830	0/0:23,0:23:63.21:0,63,3576	1/1:2,10:12:30.08:1085,30,0	1/1:1,2:3:3.01:119,3,0	0/0:15,0:15:42.05:0,42,2404	1/1:0,15:15:38.82:1543,39,0	1/1:2,6:8:12.04:475,12,0	1/1:1,9:10:21.07:831,21,0	0/0:22,0:22:63.20:0,63,3219	0/0:31,0:31:78.24:0,78,4629	0/0:23,0:23:69.22:0,69,4210	1/1:2,6:8:18.04:617,18,0	1/1:1,2:3:6.02:237,6,0	1/1:9,19:28:27.09:1067,27,0	0/0:7,0:7:21.07:0,21,1068	0/0:11,0:11:30.09:0,30,1474	0/0:34,0:34:93.28:0,93,5106	1/1:0,5:5:15.05:594,15,0	1/1:2,14:16:36.10:1279,36,0	1/1:2,14:16:36.12:1425,36,0	1/1:0,5:5:9.03:356,9,0
chr10	58590624	.	GAA	G	2137.12	PASS	AB=0.917;AC=25;AF=0.446;AN=56;BaseQRankSum=4.964;DP=500;FS=3.912;HRun=15;HaplotypeScore=68.3928;InbreedingCoeff=0.8597;MQ=69.55;MQ0=2;MQRankSum=1.345;QD=9.89;ReadPosRankSum=4.971;VQSLOD=2.0801;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:25:35.93:0,36,151	0/0:7,0:8:18.01:0,18,196	0/0:13,0:9:7.73:0,8,36	0/1:10,1:9:38.80:39,0,66	0/0:17,0:29:41.67:0,42,267	0/0:10,0:17:41.06:0,41,448	0/0:19,0:21:52.54:0,53,525	0/0:30,0:32:68.55:0,69,726	0/0:14,0:16:37.36:0,37,383	1/1:9,9:19:28.54:222,29,0	1/1:7,9:16:5.55:97,6,0	0/0:15,0:15:33.01:0,33,360	1/1:0,8:7:21:185,21,0	1/1:4,14:20:15.13:240,15,0	1/1:4,12:17:29.57:249,30,0	0/0:17,0:19:46.39:0,46,520	0/0:21,0:23:65.12:0,65,781	0/0:20,1:24:5.89:0,6,489	1/1:9,10:20:17.73:207,18,0	1/1:4,11:17:17.19:129,17,0	1/1:3,2:6:8.67:65,9,0	0/0:15,1:18:12.06:0,12,408	0/0:12,0:13:29.08:0,29,244	0/0:9,0:10:26.51:0,27,259	1/1:3,14:18:27.98:247,28,0	1/1:6,11:19:35.27:283,35,0	1/1:8,12:24:10.63:208,11,0	1/1:12,7:21:17.33:188,17,0
chr10	58591521	.	T	TTTC	5054.64	PASS	AB=1.000;AC=22;AF=0.393;AN=56;BaseQRankSum=-2.880;DP=514;FS=11.234;HRun=0;HaplotypeScore=108.3054;InbreedingCoeff=0.7288;MQ=43.44;MQ0=12;MQRankSum=-2.392;QD=19.37;ReadPosRankSum=5.556;VQSLOD=3.8346;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:22:37.59:0,38,240	0/0:7,0:7:16.52:0,17,194	0/0:12,0:4:8.94:0,9,72	0/0:25,0:7:9.27:0,9,56	0/0:37,0:35:29.48:0,29,346	0/0:14,0:10:11.78:0,12,121	0/0:15,0:13:23.51:0,24,201	0/0:23,0:23:3.16:0,3,351	0/0:13,0:12:1:0,1,123	0/1:37,0:35:11.20:695,0,11	1/1:25,0:25:38.74:548,39,0	0/0:15,0:12:16.20:0,16,129	1/1:11,2:12:9.72:233,10,0	1/1:17,2:19:36.87:512,37,0	1/1:24,0:22:39.35:586,39,0	0/0:14,0:13:32.56:0,33,236	0/0:26,0:25:47.88:0,48,746	0/0:8,0:6:12.82:0,13,91	1/1:25,0:22:8.22:283,8,0	1/1:25,1:24:35.52:437,36,0	1/1:6,0:5:5.98:94,6,0	0/0:7,0:7:14.46:0,14,117	0/0:7,0:5:12.85:0,13,102	0/0:7,0:5:9.85:0,10,74	1/1:24,0:24:45.08:514,45,0	1/1:29,0:27:17.36:576,17,0	0/1:27,0:25:13.16:383,0,13	1/1:5,1:6:17.99:193,18,0
chr10	58591522	.	T	TTC	4116.76	PASS	AB=0.951;AC=24;AF=0.429;AN=56;BaseQRankSum=0.105;DP=511;FS=9.863;HRun=0;HaplotypeScore=104.3605;InbreedingCoeff=0.7181;MQ=42.94;MQ0=13;MQRankSum=-2.173;QD=14.00;ReadPosRankSum=5.369;VQSLOD=2.8380;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:22:0.79:0,1,143	0/0:7,0:7:19.55:0,20,212	0/0:12,0:4:6.88:0,7,56	0/0:25,0:7:7.34:0,7,51	0/1:36,0:34:33.09:33,0,261	0/0:14,0:10:14.47:0,14,142	0/0:15,0:13:23.93:0,24,201	0/0:21,0:21:46.98:0,47,476	0/0:13,0:12:19.72:0,20,145	0/1:33,4:35:32.60:634,0,33	1/1:26,0:26:21.19:410,21,0	0/0:15,0:12:20.45:0,20,142	1/1:10,2:11:16.94:162,17,0	1/1:16,3:19:42.37:424,42,0	1/1:22,1:21:14.68:446,15,0	0/0:14,0:13:13.14:0,13,197	0/0:27,0:26:65.85:0,66,824	0/0:8,0:6:14.93:0,15,114	1/1:23,2:22:17.44:292,17,0	1/1:26,0:24:34.29:341,34,0	1/1:6,0:5:5.92:57,6,0	0/0:7,0:7:17.29:0,17,136	0/0:7,0:5:14.96:0,15,125	0/0:8,0:6:11.17:0,11,78	1/1:22,1:23:42.77:400,43,0	1/1:28,1:27:4.85:453,5,0	1/1:25,1:24:4.01:309,4,0	1/1:6,0:6:17.88:156,18,0
chr10	58591523	.	T	TC	2201.74	PASS	AB=0.886;AC=17;AF=0.304;AN=56;BaseQRankSum=-0.033;DP=502;FS=19.232;HRun=0;HaplotypeScore=96.5631;InbreedingCoeff=0.3788;MQ=41.30;MQ0=14;MQRankSum=-1.106;QD=8.67;ReadPosRankSum=5.597;VQSLOD=2.2151;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:22:37.51:0,38,215	0/0:7,0:7:20.69:0,21,209	0/0:11,0:3:9:0,9,81	0/0:24,0:7:2.07:0,2,43	0/0:37,0:34:67.15:0,67,431	0/0:14,0:10:23.34:0,23,163	0/0:14,0:12:23.65:0,24,198	0/0:18,0:18:47.69:0,48,483	0/0:13,0:12:25.82:0,26,183	0/1:36,2:36:97.49:362,0,97	0/1:19,7:26:17.69:237,0,18	0/0:14,0:11:22.01:0,22,154	0/1:11,1:11:25.52:60,0,26	1/1:16,3:19:15.52:202,16,0	1/1:18,4:20:12.93:268,13,0	0/0:14,0:13:20.97:0,21,182	0/0:27,0:26:66.09:0,66,744	0/0:8,0:6:14.93:0,15,116	0/1:23,1:21:51.52:141,0,52	1/1:23,2:23:18.40:229,18,0	1/1:4,1:4:4.91:35,5,0	0/0:8,0:7:18.78:0,19,144	0/0:7,0:5:14.96:0,15,127	0/0:8,0:6:11.84:0,12,87	0/1:21,2:23:0.75:253,0,1	0/1:23,6:27:74.73:292,0,75	0/1:20,5:23:51.89:169,0,52	1/1:6,0:6:17.77:135,18,0
chr10	58591535	.	T	TTG	4559.84	PASS	AB=0.979;AC=33;AF=0.589;AN=56;BaseQRankSum=6.378;DP=478;FS=0.911;HRun=0;HaplotypeScore=98.6544;InbreedingCoeff=0.3185;MQ=35.71;MQ0=12;MQRankSum=-4.426;QD=11.87;ReadPosRankSum=-0.443;VQSLOD=4.6466;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:16,7:23:27.76:470,28,0	0/0:6,0:7:19.05:0,19,172	0/0:8,0:1:3:0,3,29	0/1:18,0:4:0:0,0,0	1/1:18,10:28:35.13:519,35,0	0/1:15,0:11:30.37:81,0,30	0/0:9,0:7:8.88:0,9,59	0/0:20,0:20:30.77:0,31,391	0/1:13,0:12:34.59:35,0,46	1/1:24,7:32:67.69:654,68,0	1/1:13,1:23:39.83:350,40,0	0/1:15,0:12:21.76:22,0,55	0/1:15,0:13:0.06:88,0,0	1/1:17,1:18:12.22:144,12,0	1/1:16,2:23:24.73:315,25,0	0/0:14,0:13:3.24:0,3,117	0/0:29,0:27:68.68:0,69,676	0/0:7,0:6:13.22:0,13,66	1/1:12,4:16:17.75:363,18,0	1/1:16,2:19:33.23:306,33,0	1/1:3,1:3:2.04:37,2,0	0/1:9,0:8:32.77:34,0,33	0/1:8,0:6:13.47:38,0,13	0/1:9,0:7:8.98:27,0,9	1/1:15,2:20:24.33:269,24,0	1/1:24,2:28:49.31:474,49,0	0/1:19,3:24:4.28:300,0,4	1/1:3,0:5:1.21:36,1,0
chr10	58591537	.	TTC	T	1569.28	PASS	AB=0.997;AC=35;AF=0.648;AN=54;BaseQRankSum=3.661;DP=474;FS=49.770;HRun=0;HaplotypeScore=105.2142;InbreedingCoeff=0.2316;MQ=35.57;MQ0=11;MQRankSum=-1.768;QD=4.12;ReadPosRankSum=-1.099;VQSLOD=0.6638;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:23:20.10:20,0,79	0/0:8,0:8:15.26:0,15,222	0/0:8,0:1:2.98:0,3,21	./.	0/1:29,0:27:10.61:11,0,84	1/1:15,0:11:2.70:55,3,0	0/1:9,0:7:3.28:28,0,3	0/0:19,0:19:27.05:0,27,501	1/1:13,0:12:21.13:125,21,0	0/1:33,1:32:24.80:195,0,25	1/1:22,1:23:8.33:141,8,0	1/1:14,0:12:19.20:119,19,0	0/1:15,0:13:11.84:41,0,12	0/1:18,0:17:3.34:41,0,3	0/1:25,0:23:2.48:94,0,2	0/0:13,0:12:30.58:0,31,264	0/0:28,0:26:52.49:0,52,586	1/1:8,0:6:10.76:72,11,0	0/1:18,0:16:33.14:33,0,67	0/1:22,0:20:12.67:13,0,43	1/1:3,1:3:5.61:45,6,0	1/1:9,0:8:16.26:101,16,0	1/1:8,0:6:14.39:90,14,0	1/1:9,0:7:9.80:48,10,0	1/1:21,0:20:11.64:101,12,0	1/1:29,1:28:14.03:158,14,0	1/1:25,1:24:36.22:200,36,0	1/1:5,0:5:3.47:10,3,0
chr10	58591538	.	T	TTG	736.38	PASS	AB=0.951;AC=12;AF=0.222;AN=54;BaseQRankSum=3.185;DP=449;FS=55.496;HRun=0;HaplotypeScore=102.4511;InbreedingCoeff=-0.1741;MQ=35.56;MQ0=11;MQRankSum=-2.634;QD=3.41;ReadPosRankSum=-0.717;VQSLOD=-0.0589;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:23:21.53:0,22,282	0/0:8,0:8:21.01:0,21,266	0/0:8,0:1:3.01:0,3,38	./.	0/0:28,0:26:37.78:0,38,269	0/0:15,0:11:13.64:0,14,122	0/0:9,0:7:8.89:0,9,61	0/0:18,0:18:43.20:0,43,605	0/0:12,0:12:18.93:0,19,127	0/1:31,0:29:94.10:94,0,258	0/1:19,1:21:40.91:129,0,41	0/0:13,0:11:21.09:0,21,137	0/1:13,1:12:37.57:38,0,49	0/1:14,3:16:22.63:100,0,23	0/1:22,1:21:31.57:120,0,32	0/0:13,0:12:31.26:0,31,305	0/0:28,0:26:69.08:0,69,875	0/0:7,0:5:11.81:0,12,76	0/1:18,0:16:54.14:54,0,157	0/1:20,1:19:8.04:8,0,107	1/1:2,1:2:2.87:36,3,0	0/0:9,0:8:20.32:0,20,125	0/0:8,0:6:14.67:0,15,100	0/0:9,0:8:7.22:0,7,43	0/1:16,0:15:35.70:36,0,40	0/1:26,1:25:99:161,0,162	0/1:22,1:23:89.35:104,0,89	0/0:4,0:4:0.23:0,0,22
chr10	58594064	.	AAAAAAAAAAAAAAAAC	A	8871.60	PASS	AB=0.917;AC=17;AF=0.304;AN=56;BaseQRankSum=8.168;DP=560;FS=3.626;HRun=0;HaplotypeScore=234.8180;InbreedingCoeff=0.8866;MQ=59.02;MQ0=7;MQRankSum=-8.924;QD=56.15;ReadPosRankSum=11.651;VQSLOD=2.6378;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:78.26:0,78,4320	0/0:8,0:8:24.08:0,24,1151	0/0:44,0:13:29.34:0,29,913	0/0:40,0:13:30.82:0,31,624	0/0:28,0:28:73.79:0,74,3293	1/1:3,24:27:44.82:1844,45,0	1/1:8,17:25:29.34:1225,29,0	0/0:24,0:23:59.87:0,60,2829	1/1:5,17:22:41.73:1703,42,0	0/0:24,0:23:66.23:0,66,3434	0/0:20,0:20:54.19:0,54,2930	1/1:1,16:17:33.01:1352,33,0	0/0:12,0:10:27.09:0,27,1547	0/0:4,0:4:12.04:0,12,838	0/0:18,0:18:48.15:0,48,2281	0/1:10,1:11:89.91:90,0,1910	0/0:35,0:35:96.33:0,96,5587	1/1:3,8:11:11.78:408,12,0	0/0:18,0:18:48.16:0,48,2771	0/0:20,0:19:57.20:0,57,2914	0/0:6,0:6:18.06:0,18,698	1/1:3,19:22:38.41:1492,38,0	1/1:5,5:10:11.52:491,12,0	1/1:5,8:13:8.55:266,9,0	0/0:16,0:16:42.14:0,42,2325	0/0:19,0:19:54.19:0,54,2966	0/0:21,0:21:51.18:0,51,3184	0/0:19,0:19:45.15:0,45,2315
chr10	58594079	.	AC	A	1029.02	PASS	AB=0.963;AC=24;AF=0.429;AN=56;BaseQRankSum=3.415;DP=495;FS=133.157;HRun=1;HaplotypeScore=137.9694;InbreedingCoeff=0.4020;MQ=60.18;MQ0=3;MQRankSum=-4.392;QD=3.56;ReadPosRankSum=2.195;VQSLOD=-0.3197;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:29:84.32:84,0,114	0/0:13,0:13:15.28:0,15,192	0/0:29,2:10:8.67:0,9,135	0/0:25,0:10:10.92:0,11,113	0/1:30,0:30:48.38:48,0,141	1/1:24,0:24:40.41:171,40,0	1/1:18,0:18:27.17:121,27,0	0/1:17,4:20:7.44:7,0,187	1/1:18,0:18:37.50:158,37,0	0/1:16,0:15:11.34:11,0,175	0/0:21,0:21:36.35:0,36,255	1/1:16,0:16:29.59:126,30,0	0/0:12,0:11:25.81:0,26,163	0/0:8,0:8:20.67:0,21,147	0/0:11,0:11:16.72:0,17,91	0/0:13,0:13:20.91:0,21,226	0/1:26,0:26:4.64:5,0,321	1/1:8,0:8:11:54,11,0	0/0:25,0:25:27.84:0,28,347	0/1:13,0:12:6.84:7,0,127	0/0:5,0:5:1.68:0,2,43	1/1:19,0:19:35.18:153,35,0	1/1:14,0:14:34.31:195,34,0	1/1:8,0:8:8.32:42,8,0	0/1:16,0:16:12.59:13,0,94	0/0:16,0:16:31.34:0,31,227	0/0:26,0:26:22.59:0,23,233	0/1:11,2:13:30.06:30,0,89
chr10	58594098	.	GGATTGAAGCTGTT	G	10981.72	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=3.960;DP=414;FS=11.732;HRun=0;HaplotypeScore=196.2615;InbreedingCoeff=0.9728;MQ=78.95;MQ0=0;MQRankSum=-9.043;QD=89.28;ReadPosRankSum=3.818;VQSLOD=3.8644;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:54.19:0,54,3314	0/0:14,0:14:42.14:0,42,2741	0/0:16,0:11:27.09:0,27,1478	0/0:32,0:22:59.63:0,60,3136	0/0:15,0:15:45.14:0,45,2808	0/0:24,0:24:45.15:0,45,2442	0/0:20,0:20:30.06:0,30,1615	0/0:16,0:16:42.14:0,42,2625	0/0:19,0:19:48.16:0,48,3148	1/1:1,6:7:18.06:726,18,0	1/1:1,10:11:21.02:744,21,0	0/0:20,0:20:39.13:0,39,2301	1/1:0,13:13:32.56:1329,33,0	1/1:0,8:8:24.08:967,24,0	1/1:0,8:8:21.07:847,21,0	0/0:12,0:12:33.11:0,33,2161	0/0:23,0:23:63.22:0,63,3908	0/0:10,0:10:21.07:0,21,1255	1/1:4,13:17:38.38:1152,38,0	1/1:0,9:9:27.09:1024,27,0	1/1:1,4:5:6.02:202,6,0	0/0:22,0:22:60.21:0,60,3675	0/0:15,0:15:39.13:0,39,2246	0/0:13,0:13:24.08:0,24,1318	1/1:0,13:13:24.08:967,24,0	1/1:1,9:10:24.08:968,24,0	1/1:0,19:19:42.14:1693,42,0	1/1:0,3:3:9.03:363,9,0
chr10	58596387	.	T	TACACAC	5342.89	PASS	AB=1.000;AC=38;AF=0.731;AN=52;BaseQRankSum=5.742;DP=533;FS=11.906;HRun=0;HaplotypeScore=176.3352;InbreedingCoeff=0.6451;MQ=61.76;MQ0=8;MQRankSum=-7.897;QD=13.26;ReadPosRankSum=-2.420;VQSLOD=3.2112;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:30,10:46:17.40:586,17,0	0/0:3,0:4:9.92:0,10,170	0/0:31,0:19:5.93:0,6,154	0/1:27,0:19:7.71:10,0,8	1/1:15,4:20:13.44:319,13,0	1/1:23,0:22:8.86:138,9,0	1/1:22,0:21:10.07:209,10,0	0/0:22,0:22:21.06:0,21,370	1/1:26,0:26:15.19:412,15,0	1/1:15,0:16:24.08:547,24,0	./.	1/1:19,0:19:9.03:223,9,0	1/1:19,0:19:7.90:195,8,0	1/1:7,0:7:3.01:78,3,0	1/1:25,1:27:27.09:683,27,0	0/0:16,0:18:40.01:0,40,773	0/0:26,0:28:60.20:0,60,1176	1/1:20,0:19:26.97:407,27,0	1/1:13,0:12:9.81:90,10,0	1/1:18,0:18:2.83:71,3,0	0/1:22,0:21:0:0,0,0	0/0:17,0:17:0.94:0,1,1	1/1:11,0:11:3.01:35,3,0	1/1:24,0:32:5.75:125,6,0	1/1:10,0:10:9.03:174,9,0	1/1:11,1:14:18.92:393,19,0	1/1:11,0:11:24.08:646,24,0	./.
chr10	58596414	.	A	ACACACAC	2348.03	PASS	AB=0.969;AC=16;AF=0.286;AN=56;BaseQRankSum=3.862;DP=540;FS=65.638;HRun=0;HaplotypeScore=175.4846;InbreedingCoeff=-0.2330;MQ=61.06;MQ0=10;MQRankSum=-5.798;QD=8.04;ReadPosRankSum=2.851;VQSLOD=0.5814;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:34,0:34:99:283,0,502	0/0:7,0:7:18.04:0,18,338	0/0:44,0:27:62.63:0,63,836	0/0:27,0:14:17.37:0,17,290	0/1:21,0:21:99:194,0,331	0/1:21,0:20:28.35:28,0,377	0/1:22,0:21:99:117,0,287	0/0:29,0:29:69.21:0,69,1176	1/1:18,0:19:15.01:307,15,0	0/1:21,0:21:95:95,0,276	0/0:11,0:11:19.72:0,20,122	0/0:16,0:16:39.01:0,39,448	0/1:16,1:17:79.55:80,0,86	0/1:12,1:13:46.73:77,0,47	0/1:21,5:26:99:606,0,187	0/0:24,0:24:69.20:0,69,1385	0/0:30,0:30:81.26:0,81,1842	0/1:16,0:16:0.96:1,0,466	0/1:17,0:16:7.86:8,0,261	0/0:10,0:10:12.48:0,12,76	0/0:16,0:15:12:0,12,104	0/0:10,0:11:20.36:0,20,171	0/1:9,0:9:24.36:24,0,180	0/1:20,0:20:31.29:31,0,208	0/0:17,0:17:2.93:0,3,19	0/1:12,0:12:82.46:268,0,82	0/1:20,2:24:91.75:388,0,92	0/0:5,0:5:5.96:0,6,43
chr10	58596416	.	A	AGG	4471.70	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-0.247;DP=570;FS=0.920;HRun=8;HaplotypeScore=126.4564;InbreedingCoeff=0.9658;MQ=60.99;MQ0=8;MQRankSum=-1.631;QD=20.33;ReadPosRankSum=-4.331;VQSLOD=2.3979;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:60.09:0,60,644	0/0:7,0:7:13.76:0,14,160	0/0:40,0:25:61.10:0,61,627	0/0:28,0:14:27.17:0,27,259	0/0:22,0:22:39.38:0,39,409	0/0:19,0:21:44.88:0,45,528	0/0:20,0:21:34.23:0,34,348	0/0:25,0:33:59.99:0,60,643	0/0:2,0:18:37.22:0,37,214	1/1:5,16:22:51.17:798,51,0	1/1:5,11:16:24.47:344,24,0	0/0:16,0:17:45.09:0,45,486	1/1:3,14:18:24.07:343,24,0	1/1:4,11:17:14.93:169,15,0	1/1:8,13:28:42.10:619,42,0	0/0:23,0:23:60.06:0,60,642	0/0:30,0:30:72.18:0,72,800	0/0:14,0:15:44.85:0,45,474	1/1:8,10:19:42.55:613,43,0	1/1:4,10:16:32.47:431,32,0	1/1:3,15:19:14.49:236,14,0	0/0:11,0:11:24.49:0,24,247	0/0:9,0:9:21.05:0,21,229	0/0:20,0:20:22.08:0,22,240	1/1:2,15:19:8.47:76,8,0	1/1:6,7:13:21.07:308,21,0	1/1:1,21:26:29.93:441,30,0	1/1:4,1:5:6.02:93,6,0
chr10	58597245	.	CCTTGGGCGAGTAT	C	4754.89	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=10.437;DP=704;FS=3.688;HRun=0;HaplotypeScore=267.4897;InbreedingCoeff=0.9997;MQ=79.71;MQ0=0;MQRankSum=-9.866;QD=80.59;ReadPosRankSum=0.196;VQSLOD=4.5166;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,27:30:63.22:2516,63,0	0/0:11,0:11:33.11:0,33,2089	0/0:21,0:21:60.14:0,60,3000	0/0:20,0:19:54.18:0,54,2684	1/1:4,25:29:66.14:2238,66,0	0/0:20,0:20:60.19:0,60,3102	0/0:27,0:27:75.26:0,75,4100	0/0:37,0:37:99:0,108,6044	0/0:30,0:30:90.30:0,90,4523	0/0:27,0:27:78.27:0,78,4579	0/0:19,0:19:57.20:0,57,3567	0/0:35,0:35:99:0,102,5459	0/0:27,0:27:72.25:0,72,4168	0/0:20,0:20:60.21:0,60,3956	0/0:28,0:28:81.26:0,81,4798	0/0:28,0:28:81.27:0,81,4763	0/0:35,0:35:99:0,102,6556	0/0:22,0:22:66.23:0,66,3687	0/0:18,0:18:51.15:0,51,2934	0/0:19,0:19:57.20:0,57,3606	0/0:36,0:36:99:0,102,6031	0/0:16,0:16:48.16:0,48,2796	0/0:17,0:17:51.17:0,51,2776	0/0:35,0:35:99:0,102,5086	0/0:34,0:34:99:0,99,6134	0/0:30,0:30:84.28:0,84,5232	0/0:17,0:17:51.18:0,51,2995	0/0:16,0:16:33.11:0,33,2175
chr10	58598185	.	GCA	G	7587.98	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=10.290;DP=906;FS=21.591;HRun=0;HaplotypeScore=123.1383;InbreedingCoeff=0.9755;MQ=62.08;MQ0=5;MQRankSum=-1.491;QD=27.79;ReadPosRankSum=4.038;VQSLOD=4.3221;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:48:99:0,111,1788	0/0:14,0:14:36.12:0,36,591	0/0:44,0:34:54.59:0,55,789	0/0:34,0:26:45.87:0,46,924	0/0:40,3:43:4.87:0,5,1386	1/1:6,30:36:84.27:1051,84,0	1/1:9,21:30:62.89:788,63,0	0/0:33,0:33:67.99:0,68,1018	1/1:4,27:32:84.10:1027,84,0	0/0:32,2:34:18.23:0,18,1351	0/0:20,0:20:51.17:0,51,842	1/1:4,26:30:63.09:788,63,0	0/0:22,0:22:60.19:0,60,936	0/0:25,1:26:37.72:0,38,1145	0/0:43,0:43:99:0,120,1978	0/0:24,0:24:63.22:0,63,1040	0/0:21,1:22:16.65:0,17,797	1/1:3,28:29:52.24:842,52,0	0/0:18,0:18:48.16:0,48,788	0/0:22,0:22:63.22:0,63,1038	0/0:90,2:92:99:0,157,3588	1/1:4,33:38:93.13:1140,93,0	1/1:6,21:26:54.64:676,55,0	1/1:8,41:49:99:1276,102,0	0/0:16,0:16:30.10:0,30,495	0/0:29,0:29:69.24:0,69,1139	0/0:26,0:26:78.25:0,78,1260	0/0:21,0:21:57.19:0,57,937
chr10	58598648	.	G	GT	2068.42	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-0.796;DP=675;FS=0.463;HRun=8;HaplotypeScore=136.5106;InbreedingCoeff=0.9813;MQ=63.05;MQ0=4;MQRankSum=-2.504;QD=26.86;ReadPosRankSum=1.766;VQSLOD=1.9128;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,40:43:99:1258,111,0	0/0:11,0:11:32.81:0,33,286	0/0:25,0:14:17.40:0,17,205	0/0:43,0:20:29.03:0,29,208	1/1:4,29:34:84.04:933,84,0	0/0:21,0:21:39.02:0,39,357	0/0:22,0:22:48.01:0,48,435	0/0:40,0:40:98.94:0,99,891	0/0:13,0:13:20.98:0,21,182	0/0:29,0:29:57.01:0,57,520	0/0:26,0:26:66.02:0,66,599	0/0:16,0:15:29.99:0,30,268	0/0:14,0:14:30.01:0,30,274	0/0:22,1:23:16.45:0,16,404	0/0:17,0:17:42.02:0,42,384	0/0:26,0:26:59.99:0,60,545	0/0:28,0:28:65.96:0,66,588	0/0:32,0:32:69:0,69,631	0/0:34,1:31:59.20:0,59,632	0/0:33,0:33:90.02:0,90,815	0/0:12,0:12:33.02:0,33,302	0/0:13,0:13:33.02:0,33,302	0/0:14,0:14:29.56:0,30,274	0/0:22,0:22:45:0,45,402	0/0:18,0:18:51:0,51,459	0/0:25,0:25:69.02:0,69,626	0/0:28,0:28:18.03:0,18,550	0/0:10,0:10:30.02:0,30,274
chr10	58598682	.	GT	G	3023.67	PASS	AB=0.825;AC=28;AF=0.500;AN=56;BaseQRankSum=-6.339;DP=686;FS=3.663;HRun=17;HaplotypeScore=154.0664;InbreedingCoeff=0.8392;MQ=59.47;MQ0=16;MQRankSum=0.167;QD=9.11;ReadPosRankSum=2.222;VQSLOD=1.5057;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:73.37:0,73,308	1/1:5,5:10:16.38:89,16,0	0/0:24,0:7:7.19:0,7,57	0/0:47,0:12:2.56:0,3,14	0/0:33,1:34:54.22:0,54,305	0/0:10,0:10:10.78:0,11,44	0/0:28,0:28:54.17:0,54,235	0/0:36,0:37:38.25:0,38,266	0/0:14,0:14:20.52:0,21,82	1/1:5,17:23:47.68:267,48,0	1/1:5,15:18:35.33:232,35,0	0/0:21,0:20:33.41:0,33,134	1/1:7,10:16:28.98:166,29,0	1/1:6,21:27:49.40:282,49,0	1/1:7,10:17:28.75:166,29,0	0/1:19,6:25:0.96:92,0,1	0/1:22,2:25:13.11:114,0,13	0/0:36,0:36:79.32:0,79,330	1/1:14,13:24:14.50:192,15,0	1/1:9,24:33:75.35:431,75,0	1/1:2,16:19:47.84:261,48,0	0/0:12,0:12:26.70:0,27,108	0/0:23,0:24:49.54:0,50,208	0/0:27,0:26:45.50:0,46,186	1/1:3,14:17:43.56:247,44,0	1/1:7,21:28:62.83:352,63,0	1/1:14,16:30:17.83:286,18,0	1/1:5,4:9:11.46:66,11,0
chr10	58598686	.	T	TTG	3563.12	PASS	AB=1.000;AC=40;AF=0.714;AN=56;BaseQRankSum=4.569;DP=683;FS=32.280;HRun=0;HaplotypeScore=163.8277;InbreedingCoeff=0.4961;MQ=60.55;MQ0=16;MQRankSum=0.877;QD=6.36;ReadPosRankSum=3.585;VQSLOD=1.4627;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:37,0:37:31.71:32,0,61	0/0:10,0:10:26.82:0,27,270	0/0:25,0:8:12.43:0,12,134	0/1:43,0:11:0.01:0,0,40	0/1:35,0:35:99:112,0,163	1/1:11,0:11:14:67,14,0	1/1:26,1:27:29.41:260,29,0	0/0:36,0:35:84.56:0,85,785	1/1:15,0:15:22.16:117,22,0	1/1:23,0:23:55.93:272,56,0	1/1:20,0:18:11.43:79,11,0	1/1:22,0:21:4.34:130,4,0	0/1:20,0:19:12.70:71,0,13	1/1:28,0:28:22.92:128,23,0	1/1:16,0:16:30.67:158,31,0	0/0:24,0:24:62.97:0,63,595	0/0:28,0:26:69.53:0,70,701	1/1:34,1:35:25.37:352,25,0	0/1:30,0:26:16.30:196,0,16	1/1:32,0:32:52.58:218,53,0	1/1:20,0:19:33.03:118,33,0	1/1:11,0:11:30.85:145,31,0	1/1:24,1:25:43.63:316,44,0	1/1:25,1:25:43.55:225,44,0	1/1:18,0:18:18.41:99,18,0	1/1:30,0:29:50.30:228,50,0	0/1:29,0:29:19.89:162,0,20	1/1:7,0:7:12.62:78,13,0
chr10	58598687	.	T	TG	6892.46	PASS	AB=0.990;AC=43;AF=0.768;AN=56;BaseQRankSum=7.311;DP=677;FS=47.806;HRun=0;HaplotypeScore=138.7889;InbreedingCoeff=0.7033;MQ=61.37;MQ0=16;MQRankSum=1.276;QD=12.42;ReadPosRankSum=6.355;VQSLOD=3.0963;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:36,0:36:29.62:122,30,0	0/0:10,0:10:27:0,27,242	0/0:24,0:8:16.88:0,17,179	0/1:42,0:11:5.38:5,0,78	0/1:33,1:34:58.84:157,0,59	1/1:1,10:11:14.96:154,15,0	1/1:4,24:28:55.25:586,55,0	0/0:35,0:34:82.06:0,82,764	1/1:0,14:15:24.07:269,24,0	1/1:24,0:24:64.37:363,64,0	1/1:20,0:18:30.82:171,31,0	1/1:5,18:22:4.13:365,4,0	1/1:20,0:19:15.07:136,15,0	1/1:28,0:28:33.82:217,34,0	1/1:15,0:15:40.93:218,41,0	0/0:24,0:24:62.98:0,63,564	0/0:28,0:26:69.47:0,69,638	1/1:13,22:35:61.73:885,62,0	0/1:28,0:25:7.34:265,0,7	1/1:32,0:32:80.56:363,81,0	1/1:20,0:19:48.14:213,48,0	1/1:0,11:11:33.01:364,33,0	1/1:3,21:24:55.84:578,56,0	1/1:4,21:24:50.83:559,51,0	1/1:19,0:19:38.68:190,39,0	1/1:29,0:28:67.88:354,68,0	1/1:29,0:29:15.59:258,16,0	1/1:7,0:7:18.37:102,18,0
chr10	58600755	.	C	CATG	11997.65	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-0.820;DP=771;FS=0.638;HRun=0;HaplotypeScore=135.3203;InbreedingCoeff=0.9999;MQ=85.76;MQ0=0;MQRankSum=-12.885;QD=57.68;ReadPosRankSum=-1.366;VQSLOD=5.7091;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,135,2191	0/0:13,0:13:39.13:0,39,650	0/0:21,0:21:46.35:0,46,785	0/0:35,0:35:87.30:0,87,1421	0/0:31,0:31:87.27:0,87,1380	1/1:3,13:15:42.14:949,42,0	1/1:10,25:36:96.29:2094,96,0	0/0:42,0:42:99:0,114,1850	1/1:3,26:29:81.28:1832,81,0	0/0:35,0:35:96.33:0,96,1598	0/0:26,0:26:78.22:0,78,1253	1/1:3,28:31:87.30:1964,87,0	0/0:25,0:25:69.24:0,69,1146	0/0:20,0:20:57.19:0,57,946	0/0:27,0:27:78.27:0,78,1297	0/0:34,0:34:96.31:0,96,1574	0/0:23,0:23:66.23:0,66,1099	1/1:2,11:14:39.09:832,39,0	0/0:18,0:18:51.17:0,51,825	0/0:29,0:29:87.28:0,87,1422	0/0:42,0:42:99:0,123,2044	1/1:7,21:28:69.24:1555,69,0	1/1:3,20:23:66.23:1451,66,0	1/1:6,25:31:62.60:1322,63,0	0/0:27,0:27:72.22:0,72,1173	0/0:24,0:24:69.24:0,69,1146	0/0:30,0:30:90.31:0,90,1495	0/0:11,0:11:33.11:0,33,545
chr10	58600801	.	T	TTTGGA	15445.17	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=0.287;DP=762;FS=5.400;HRun=0;HaplotypeScore=149.1867;InbreedingCoeff=0.9999;MQ=91.39;MQ0=0;MQRankSum=-15.323;QD=84.86;ReadPosRankSum=2.067;VQSLOD=6.9342;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,144,3238	0/0:12,0:12:36.12:0,36,836	0/0:42,0:42:99:0,123,2707	0/0:24,0:24:42.14:0,42,1388	0/0:31,0:31:93.30:0,93,2094	1/1:0,19:20:57.20:1896,57,0	1/1:4,26:34:90.29:2766,90,0	0/0:39,0:39:99:0,117,2519	1/1:3,19:24:66.23:2152,66,0	0/0:27,0:27:81.27:0,81,1793	0/0:20,0:20:60.21:0,60,1378	1/1:2,26:29:84.29:2724,84,0	0/0:23,0:23:69.24:0,69,1608	0/0:19,0:19:57.17:0,57,1238	0/0:29,0:29:87.30:0,87,2027	0/0:31,0:31:93.31:0,93,2055	0/0:19,0:19:54.15:0,54,1167	1/1:0,10:11:30.06:916,30,0	0/0:32,0:32:96.33:0,96,2203	0/0:27,0:27:81.26:0,81,1822	0/0:51,0:51:99:0,150,3330	1/1:0,15:16:45.11:1389,45,0	1/1:2,19:22:53.87:1664,54,0	1/1:1,21:25:63.84:1939,64,0	0/0:25,0:25:75.19:0,75,1581	0/0:30,0:30:90.30:0,90,2052	0/0:34,0:34:99:0,102,2286	0/0:15,0:15:45.13:0,45,921
chr10	58601566	.	AC	A	18440.43	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=13.275;DP=842;FS=3.766;HRun=5;HaplotypeScore=116.4988;InbreedingCoeff=0.9999;MQ=85.17;MQ0=0;MQRankSum=-4.724;QD=30.79;ReadPosRankSum=3.505;VQSLOD=4.2705;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,129,1716	0/0:11,0:11:30.09:0,30,393	0/0:30,0:30:44.16:0,44,960	0/0:22,0:22:51.12:0,51,650	0/0:23,0:23:66.22:0,66,902	1/1:0,27:27:78.22:885,78,0	1/1:2,25:27:75.21:851,75,0	0/0:30,0:30:72.22:0,72,957	1/1:3,26:29:75.21:851,75,0	1/1:3,34:37:99:1146,102,0	1/1:2,18:20:54.15:612,54,0	1/1:3,34:37:96.27:1088,96,0	1/1:0,34:34:96.27:1088,96,0	1/1:1,26:27:75.21:850,75,0	1/1:1,34:35:90.26:1021,90,0	0/0:36,1:37:71.31:0,71,1332	0/0:39,0:39:99:0,114,1521	1/1:2,16:18:48.13:537,48,0	1/1:4,20:24:60.15:669,60,0	1/1:0,20:20:60.17:680,60,0	1/1:2,57:59:99:1837,162,0	1/1:0,30:30:87.25:986,87,0	1/1:1,24:25:69.20:782,69,0	1/1:5,28:33:78.22:885,78,0	1/1:2,27:29:81.23:919,81,0	1/1:2,33:35:99:1123,99,0	1/1:1,35:36:96.27:1088,96,0	1/1:0,17:17:48.14:544,48,0
chr10	58601685	.	TG	T	6022.72	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=8.358;DP=690;FS=3.290;HRun=3;HaplotypeScore=78.3162;InbreedingCoeff=0.9998;MQ=84.09;MQ0=0;MQRankSum=-1.581;QD=33.84;ReadPosRankSum=3.176;VQSLOD=5.5862;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,105,1512	0/0:12,0:12:36.12:0,36,518	0/0:18,0:18:51.17:0,51,704	0/0:22,0:22:60.03:0,60,810	0/0:23,0:23:69.23:0,69,993	1/1:0,18:18:45.14:558,45,0	1/1:1,27:28:78.24:967,78,0	0/0:39,0:39:99:0,108,1522	1/1:0,22:22:57.18:704,57,0	0/0:28,0:28:84.28:0,84,1194	0/0:15,0:15:42.14:0,42,604	1/1:0,26:26:75.24:930,75,0	0/0:27,0:27:72.22:0,72,1017	0/0:30,0:30:90.28:0,90,1260	0/0:35,0:35:99:0,99,1425	0/0:32,0:32:96.31:0,96,1365	0/0:28,0:28:84.28:0,84,1207	1/1:0,17:17:45.14:558,45,0	0/0:15,0:15:45.15:0,45,648	0/0:25,0:25:75.25:0,75,1077	0/0:31,0:31:84.28:0,84,1209	1/1:1,30:31:84.26:1041,84,0	1/1:0,14:14:42.13:521,42,0	1/1:0,22:22:60.19:744,60,0	0/0:19,0:19:57.19:0,57,820	0/0:37,0:37:99:0,111,1558	0/0:30,0:29:87.23:0,87,1210	0/0:11,0:11:27.09:0,27,389
chr10	58603280	.	TGAA	T	7111.28	PASS	AB=0.935;AC=17;AF=0.304;AN=56;BaseQRankSum=14.513;DP=740;FS=3.442;HRun=0;HaplotypeScore=108.1792;InbreedingCoeff=0.9161;MQ=84.17;MQ0=0;MQRankSum=-6.568;QD=33.54;ReadPosRankSum=3.616;VQSLOD=5.6066;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,117,2589	0/0:10,0:10:24.06:0,24,473	0/0:33,0:33:90.30:0,90,1938	0/0:26,0:26:63.11:0,63,1147	0/0:22,0:22:63.22:0,63,1376	1/1:1,22:23:57.19:930,57,0	1/1:2,33:35:63.22:1028,63,0	0/0:30,0:30:72.22:0,72,1478	1/1:1,18:19:45.15:734,45,0	0/0:36,0:36:99:0,99,2156	0/0:18,0:18:48.16:0,48,1058	1/1:1,19:20:54.18:880,54,0	0/0:27,0:27:75.23:0,75,1559	0/0:21,0:21:63.21:0,63,1363	0/0:41,0:41:99:0,117,2465	0/1:27,2:29:19.70:20,0,1498	0/0:30,0:30:78.25:0,78,1680	1/1:0,20:20:45.15:734,45,0	0/0:30,0:30:78.14:0,78,1577	0/0:16,0:16:45.15:0,45,990	0/0:40,0:40:99:0,117,2564	1/1:4,20:23:60.20:977,60,0	1/1:0,21:21:54.18:880,54,0	1/1:1,20:21:57.19:929,57,0	0/0:27,0:27:78.23:0,78,1646	0/0:36,0:36:90.30:0,90,1924	0/0:33,0:32:93.32:0,93,2059	0/0:12,0:12:36.12:0,36,804
chr10	58603965	.	A	AAATGAATGAATG	25738.08	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-7.714;DP=742;FS=9.441;HRun=0;HaplotypeScore=239.5365;InbreedingCoeff=0.9736;MQ=67.96;MQ0=2;MQRankSum=-14.343;QD=76.60;ReadPosRankSum=-5.239;VQSLOD=2.5899;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:75.20:0,75,2262	0/0:11,0:11:30.10:0,30,937	0/0:28,0:26:27.04:0,27,627	0/0:17,0:14:3.01:0,3,104	0/0:32,0:32:63.16:0,63,1955	0/0:31,0:31:54.17:0,54,1775	0/0:25,0:25:42.14:0,42,1394	0/0:41,0:42:50.95:0,51,919	0/0:28,0:28:66.22:0,66,2055	1/1:14,15:34:72.03:2773,72,0	1/1:20,10:33:48.16:2433,48,0	0/0:20,0:20:42.10:0,42,1219	1/1:15,0:25:24.08:1204,24,0	1/1:14,0:31:57.20:2840,57,0	1/1:10,17:28:45.15:2593,45,0	0/0:32,0:32:75.17:0,75,2095	0/0:22,0:22:48.10:0,48,1388	0/0:15,0:15:27.09:0,27,899	1/1:20,6:26:27.06:993,27,0	1/1:18,18:38:51.18:2693,51,0	1/1:13,4:18:18.06:877,18,0	0/0:26,0:26:54.17:0,54,1705	0/0:17,0:17:39.09:0,39,1172	0/0:28,0:28:48.07:0,48,1416	1/1:15,17:33:54.18:3044,54,0	1/1:16,12:30:57.04:2277,57,0	1/1:18,10:29:48.16:2608,48,0	1/1:4,5:10:24.08:1402,24,0
chr10	58606912	.	TTCTCTC	T	642.59	PASS	AB=0.962;AC=15;AF=0.300;AN=50;BaseQRankSum=-0.757;DP=623;FS=0.933;HRun=0;HaplotypeScore=170.3448;InbreedingCoeff=-0.2336;MQ=60.75;MQ0=8;MQRankSum=-0.079;QD=1.88;ReadPosRankSum=2.568;VQSLOD=2.8070;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:23,9:34:3.36:60,3,0	0/0:9,0:8:3.01:0,3,96	./.	./.	1/1:14,2:17:2.29:5,2,0	0/0:12,0:13:1.54:0,2,27	0/1:20,0:23:7.57:76,0,8	0/0:37,0:36:2.03:0,2,5	0/1:19,0:19:21.81:31,0,22	0/1:33,0:32:69.74:114,0,70	0/0:15,0:15:8.84:0,9,76	0/1:24,0:24:47.23:47,0,147	0/0:18,0:18:18.06:0,18,286	0/0:14,0:14:6.01:0,6,61	0/1:31,0:31:27.37:27,0,203	0/0:21,0:21:18.06:0,18,399	0/0:15,0:22:6:0,6,101	0/0:14,0:14:18.05:0,18,253	0/1:31,0:31:13.77:55,0,14	0/0:12,2:15:3.42:0,3,20	./.	0/1:36,0:36:76.19:146,0,76	0/1:13,0:16:21.16:66,0,21	0/1:30,0:31:43.13:43,0,186	0/0:24,0:24:7.36:0,7,110	0/1:25,0:25:23.67:24,0,54	0/1:19,0:19:82.94:84,0,83	0/0:17,0:17:2.75:0,3,38
chr10	58607101	.	TGTGA	T	9527.33	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=13.315;DP=632;FS=16.982;HRun=0;HaplotypeScore=126.6666;InbreedingCoeff=0.9970;MQ=99.20;MQ0=0;MQRankSum=-6.090;QD=46.70;ReadPosRankSum=6.165;VQSLOD=3.9770;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,23:25:60.21:1159,60,0	0/0:17,0:17:45.09:0,45,1090	0/0:36,0:36:99:0,105,2781	0/0:37,0:37:99:0,102,2694	1/1:1,8:9:18.06:349,18,0	1/1:1,18:19:54.19:1046,54,0	1/1:2,25:27:57.20:1104,57,0	0/0:27,0:27:78.27:0,78,2082	1/1:0,16:16:48.16:929,48,0	0/0:24,0:24:63.22:0,63,1674	0/0:8,0:8:24.08:0,24,657	1/1:0,31:31:72.25:1394,72,0	0/0:24,0:24:69.20:0,69,1757	0/0:11,0:11:33.11:0,33,877	0/0:35,0:35:93.32:0,93,2495	0/0:27,0:27:69.24:0,69,1758	0/0:30,0:30:81.28:0,81,2158	1/1:1,22:23:60.21:1163,60,0	0/0:23,0:23:65.22:0,65,1669	0/0:12,0:12:27.09:0,27,738	0/0:51,0:51:99:0,132,3435	1/1:1,11:12:33.03:546,33,0	1/1:2,6:8:18.06:348,18,0	1/1:1,33:34:78.27:1490,78,0	0/0:14,0:14:33.11:0,33,892	0/0:21,0:21:63.22:0,63,1718	0/0:21,0:21:63.22:0,63,1703	0/0:10,0:10:30.10:0,30,784
chr10	58607150	.	T	TTGTG	10832.74	PASS	AC=50;AF=0.926;AN=54;BaseQRankSum=-2.140;DP=787;FS=1.655;HRun=0;HaplotypeScore=246.1731;InbreedingCoeff=0.5347;MQ=55.40;MQ0=14;MQRankSum=0.658;QD=15.63;ReadPosRankSum=2.140;VQSLOD=4.6105;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:32,0:32:5.97:71,6,0	1/1:5,2:9:9.03:158,9,0	0/0:39,0:17:6.02:0,6,82	0/0:42,0:16:8.51:0,9,102	1/1:14,0:14:6:108,6,0	1/1:23,2:25:21.01:320,21,0	1/1:22,10:33:38.38:835,38,0	1/1:23,0:22:8.15:96,8,0	1/1:19,12:32:46.70:983,47,0	1/1:24,0:29:31.33:451,31,0	./.	1/1:20,16:39:56.40:1160,56,0	1/1:27,0:33:29.70:431,30,0	1/1:22,0:30:29.01:393,29,0	1/1:24,0:40:44.95:711,45,0	1/1:24,4:47:68.70:1203,69,0	1/1:20,0:29:17.56:267,18,0	1/1:22,3:27:30.10:589,30,0	1/1:27,0:26:18.53:334,19,0	1/1:18,0:18:3:70,3,0	1/1:44,0:44:3.39:66,3,0	1/1:22,6:29:35.57:627,36,0	1/1:6,2:9:5.75:84,6,0	1/1:26,13:46:70.41:1185,70,0	1/1:17,0:17:6.01:97,6,0	1/1:34,0:32:25.25:365,25,0	1/1:20,0:23:9.03:147,9,0	1/1:1,0:2:6.02:82,6,0
chr10	58608977	.	G	GCC	4033.99	PASS	AB=0.551;AC=20;AF=0.357;AN=56;BaseQRankSum=14.001;DP=489;FS=2.903;HRun=0;HaplotypeScore=130.1882;InbreedingCoeff=0.6423;MQ=85.48;MQ0=0;MQRankSum=-14.552;QD=29.66;ReadPosRankSum=4.933;VQSLOD=5.5717;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:90.31:0,90,1452	0/0:10,0:10:27.06:0,27,408	0/0:29,0:29:81.22:0,81,1262	0/0:25,0:24:63.17:0,63,949	0/0:20,0:20:57.19:0,57,917	0/0:26,0:26:78.27:0,78,1271	0/0:22,0:22:63.22:0,63,1022	0/0:20,0:20:60.18:0,60,906	0/0:19,0:19:54.17:0,54,855	1/1:1,11:12:13.97:401,14,0	0/1:3,6:9:53.11:95,0,53	0/0:23,0:23:63.21:0,63,1019	1/1:1,12:14:42.09:511,42,0	1/1:1,12:13:39.13:515,39,0	1/1:1,16:17:51.16:661,51,0	0/0:16,0:16:48.16:0,48,774	0/0:32,0:32:96.33:0,96,1538	0/0:21,0:21:63.22:0,63,1027	1/1:6,5:11:2.38:260,2,0	0/1:1,6:7:30.17:95,0,30	0/1:0,6:6:40.77:56,0,41	0/0:16,0:16:45.15:0,45,725	0/0:12,0:12:30.10:0,30,489	0/0:31,0:31:93.32:0,93,1501	1/1:3,11:14:16.66:423,17,0	1/1:2,6:7:8.90:216,9,0	0/1:4,13:16:23.94:485,0,24	1/1:2,6:8:24.08:315,24,0
chr10	58608978	.	T	TTCTCTATGG	14663.21	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=14.961;DP=479;FS=4.601;HRun=0;HaplotypeScore=155.3115;InbreedingCoeff=0.9663;MQ=85.19;MQ0=0;MQRankSum=-14.534;QD=108.62;ReadPosRankSum=2.513;VQSLOD=5.8226;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:93.30:0,93,2725	0/0:8,0:8:24.07:0,24,664	0/0:28,0:28:81.26:0,81,2424	0/0:25,0:24:63.20:0,63,1841	0/0:19,0:19:57.20:0,57,1723	0/0:26,0:26:78.27:0,78,2540	0/0:21,0:21:63.22:0,63,1929	0/0:20,0:20:60.19:0,60,1638	0/0:17,0:17:51.18:0,51,1661	1/1:1,11:12:36.11:1446,36,0	1/1:3,6:9:27.08:916,27,0	0/0:22,0:22:66.19:0,66,1906	1/1:1,12:14:32.22:1636,32,0	1/1:1,12:13:30.09:1541,30,0	1/1:1,16:17:50.84:2073,51,0	0/0:15,0:15:45.15:0,45,1467	0/0:32,0:32:96.33:0,96,2942	0/0:21,0:21:63.22:0,63,2038	1/1:6,5:11:2.59:679,3,0	1/1:1,6:7:21.03:799,21,0	1/1:0,6:6:15.04:566,15,0	0/0:16,0:16:48.15:0,48,1428	0/0:12,0:12:33.10:0,33,999	0/0:31,0:31:93.32:0,93,2876	1/1:3,11:14:42.14:1612,42,0	1/1:1,6:6:21.07:841,21,0	1/1:4,13:16:28:1662,28,0	1/1:2,6:8:12.89:893,13,0
chr10	58611492	.	AT	A	6939.78	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=13.140;DP=553;FS=0.680;HRun=6;HaplotypeScore=56.3020;InbreedingCoeff=0.9993;MQ=78.48;MQ0=0;MQRankSum=-3.338;QD=27.87;ReadPosRankSum=0.396;VQSLOD=5.2176;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,117,1539	0/0:9,0:9:27.09:0,27,355	0/0:25,0:24:44.59:0,45,505	0/0:18,0:17:29.09:0,29,424	0/0:18,0:18:51.17:0,51,670	0/0:22,0:22:57.19:0,57,750	0/0:12,0:12:33.11:0,33,434	0/0:31,0:31:84.26:0,84,1091	0/0:10,0:10:30.08:0,30,380	1/1:3,20:23:60.15:642,60,0	1/1:1,17:18:48.12:516,48,0	0/0:14,0:14:42.14:0,42,553	1/1:1,21:22:57.12:613,57,0	1/1:3,15:18:45.11:484,45,0	1/1:0,17:17:48.12:516,48,0	0/0:22,0:22:63.18:0,63,800	0/0:20,0:20:48.16:0,48,630	0/0:19,0:19:54.14:0,54,672	1/1:5,19:24:57.11:602,57,0	1/1:1,28:29:75.18:806,75,0	1/1:1,13:14:33.08:355,33,0	0/0:17,0:17:45.14:0,45,580	0/0:16,0:16:45.15:0,45,592	0/0:12,0:12:33.11:0,33,434	1/1:2,23:25:63.16:677,63,0	1/1:0,25:25:75.16:794,75,0	1/1:2,24:25:63.15:677,63,0	1/1:0,8:8:24.06:258,24,0
chr10	58611612	.	TC	T	5448.09	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-3.082;DP=619;FS=12.650;HRun=9;HaplotypeScore=83.1227;InbreedingCoeff=0.9730;MQ=82.97;MQ0=0;MQRankSum=-2.254;QD=22.70;ReadPosRankSum=1.487;VQSLOD=4.7538;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,111,1251	0/0:8,0:8:23.10:0,23,244	0/0:19,0:19:23.69:0,24,490	0/0:32,0:30:49.66:0,50,583	0/0:26,0:26:54.15:0,54,613	0/0:3,0:23:39.77:0,40,201	0/0:5,0:26:59.86:0,60,324	0/0:20,0:20:39.12:0,39,450	0/0:5,0:26:51.01:0,51,257	1/1:7,21:28:30.14:512,30,0	1/1:3,7:10:27.01:246,27,0	0/0:6,0:23:36.83:0,37,208	1/1:1,15:16:42.02:384,42,0	1/1:2,15:17:45.02:412,45,0	1/1:2,18:20:56.90:509,57,0	0/0:22,0:22:66.18:0,66,752	0/0:32,0:32:81.12:0,81,894	0/0:1,0:24:62.50:0,62,318	1/1:5,18:23:57.03:521,57,0	1/1:2,14:16:41.97:376,42,0	1/1:5,34:40:95.03:848,95,0	0/0:5,0:18:37.57:0,38,250	0/0:3,0:11:17.04:0,17,87	0/0:3,0:21:42.61:0,43,217	1/1:1,13:14:36.02:329,36,0	1/1:6,19:25:66.02:598,66,0	1/1:3,28:30:78.04:713,78,0	0/0:3,0:3:0:0,0,0
chr10	58614626	.	T	TCC	4348.16	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=9.950;DP=565;FS=1.998;HRun=3;HaplotypeScore=119.3358;InbreedingCoeff=0.8905;MQ=53.29;MQ0=45;MQRankSum=-2.180;QD=12.32;ReadPosRankSum=-0.940;VQSLOD=1.3632;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:22:29.38:203,29,0	0/0:17,0:16:30.31:0,30,250	0/0:41,0:16:34.36:0,34,258	0/0:60,0:20:22.06:0,22,248	1/1:5,0:5:6.47:53,6,0	1/1:5,0:5:11.93:93,12,0	1/1:13,0:11:20.86:156,21,0	0/0:46,0:43:90.25:0,90,863	1/1:14,0:12:26.79:193,27,0	1/1:22,0:22:48.19:438,48,0	1/1:19,0:18:24.82:185,25,0	1/1:14,0:12:24.94:164,25,0	1/1:23,0:21:50.38:387,50,0	1/1:20,0:18:35.23:282,35,0	1/1:9,1:8:14.96:147,15,0	0/0:28,0:27:45.43:0,45,445	0/0:19,0:17:44:0,44,332	1/1:15,0:12:1.71:106,2,0	1/1:20,0:17:39.23:311,39,0	1/1:20,0:18:26.77:206,27,0	1/1:24,0:20:20.35:200,20,0	1/1:10,0:8:17.60:108,18,0	1/1:12,0:11:12.64:79,13,0	1/1:20,0:18:20.68:137,21,0	1/1:16,0:15:6.65:124,7,0	1/1:2,16:17:38.77:344,39,0	1/1:20,0:19:43.17:353,43,0	1/1:10,0:8:8.36:79,8,0
chr10	58614665	.	CTCTG	C	989.58	PASS	AB=1.000;AC=35;AF=0.795;AN=44;BaseQRankSum=5.045;DP=419;FS=3.868;HRun=0;HaplotypeScore=79.0885;InbreedingCoeff=0.2131;MQ=35.56;MQ0=54;MQRankSum=-2.196;QD=3.00;ReadPosRankSum=-0.128;VQSLOD=1.5866;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:35,0:30:5.99:49,6,0	0/0:8,6:13:10.25:0,10,67	./.	./.	./.	1/1:14,0:12:2.96:19,3,0	1/1:17,0:15:3.98:14,4,0	0/1:22,0:19:0.76:1,0,179	1/1:8,0:6:2.92:17,3,0	1/1:11,0:9:12.96:68,13,0	./.	1/1:10,0:10:8.56:47,9,0	1/1:20,0:17:8.74:65,9,0	1/1:13,0:10:11.29:89,11,0	0/0:15,0:12:3.46:0,3,17	0/1:29,0:28:62.19:62,0,286	0/1:17,0:14:71.71:89,0,72	1/1:14,0:10:22.82:152,23,0	1/1:10,0:7:15.36:113,15,0	1/1:5,0:5:2.83:25,3,0	1/1:21,0:11:5.97:45,6,0	0/1:27,0:22:0.06:0,0,0	./.	./.	0/1:17,0:16:10.85:13,0,11	1/1:18,0:15:23.59:151,24,0	1/1:14,0:13:3.37:53,3,0	1/1:8,0:5:5.94:41,6,0
chr10	58614675	.	CTCTG	C	1039.21	PASS	AB=1.000;AC=27;AF=0.587;AN=46;BaseQRankSum=3.892;DP=411;FS=10.443;HRun=0;HaplotypeScore=75.0837;InbreedingCoeff=0.3315;MQ=34.67;MQ0=53;MQRankSum=0.508;QD=4.04;ReadPosRankSum=0.164;VQSLOD=0.7395;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:38,0:33:8.46:53,8,0	0/0:11,0:10:11.67:0,12,189	./.	./.	1/1:16,0:14:5.19:13,5,0	0/0:16,0:14:4.95:0,5,24	1/1:20,0:17:1.68:7,2,0	0/0:22,0:19:47.69:0,48,563	0/0:9,0:7:2.90:0,3,16	1/1:12,0:9:20.61:244,21,0	./.	0/0:12,0:12:7.50:0,7,45	1/1:15,0:12:5.97:54,6,0	1/1:12,0:9:0.70:152,1,0	0/0:10,4:11:0.53:0,1,1	0/1:27,0:26:16:16,0,754	0/1:16,0:13:42.56:43,0,321	0/1:17,0:13:8.45:8,0,51	1/1:9,0:7:21.02:213,21,0	1/1:5,0:5:5.33:46,5,0	./.	0/1:25,0:21:0.06:0,0,0	0/0:11,0:10:0:0,0,0	./.	0/1:15,0:14:4.03:13,0,4	1/1:14,0:11:27.13:215,27,0	1/1:9,0:8:5.11:62,5,0	1/1:7,0:4:5.94:41,6,0
chr10	58614677	.	CTG	C	1064.21	PASS	AB=1.000;AC=22;AF=0.478;AN=46;BaseQRankSum=2.710;DP=409;FS=5.319;HRun=0;HaplotypeScore=70.1771;InbreedingCoeff=0.4601;MQ=34.75;MQ0=52;MQRankSum=-0.469;QD=6.74;ReadPosRankSum=0.850;VQSLOD=2.4944;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:33:4.24:0,4,17	0/0:11,0:10:0.95:0,1,131	./.	./.	0/0:16,0:14:8.94:0,9,69	0/0:15,0:13:4.70:0,5,24	1/1:20,0:17:2.45:13,2,0	0/0:23,0:20:51.44:0,51,459	0/0:10,0:8:2.94:0,3,18	1/1:3,9:9:21.05:264,21,0	./.	0/0:12,0:12:7.46:0,7,45	1/1:3,10:10:5.75:49,6,0	1/1:10,2:9:15.41:120,15,0	0/0:8,5:10:0.79:0,1,2	0/1:27,0:26:8.64:9,0,608	0/1:16,0:13:57.23:57,0,263	0/0:17,0:13:2.47:0,2,67	1/1:9,1:8:23.96:227,24,0	1/1:4,1:5:8.81:70,9,0	./.	0/0:26,0:22:0:0,0,0	0/0:11,0:10:0:0,0,0	./.	1/1:1,13:14:5.92:54,6,0	1/1:9,4:10:29.90:270,30,0	1/1:3,6:8:5.69:39,6,0	1/1:7,0:4:5.93:40,6,0
chr10	58614700	.	TCTCACA	T	696.27	PASS	AB=0.980;AC=20;AF=0.357;AN=56;BaseQRankSum=4.697;DP=459;FS=3.515;HRun=0;HaplotypeScore=100.6447;InbreedingCoeff=0.1410;MQ=42.25;MQ0=38;MQRankSum=-1.034;QD=2.82;ReadPosRankSum=-1.850;VQSLOD=1.8052;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:32:12.04:0,12,205	0/0:8,0:8:12.04:0,12,335	0/0:6,0:1:3.01:0,3,45	0/0:7,0:1:3.01:0,3,43	0/0:22,0:20:8.50:0,9,172	0/1:18,1:18:6.64:44,0,7	1/1:20,1:18:8.24:141,8,0	0/0:28,0:26:66.24:0,66,872	0/1:13,0:12:11.31:15,0,11	0/1:12,0:11:3.79:140,0,4	0/0:17,1:16:2.75:0,3,44	0/1:17,0:17:9.14:9,0,24	1/1:13,0:10:3.99:54,4,0	0/1:10,0:9:37:48,0,37	0/0:14,0:13:0.48:0,0,12	0/0:26,0:26:52.86:0,53,1633	0/0:15,0:12:35.58:0,36,762	0/1:19,0:16:21.02:94,0,21	0/1:14,0:12:35.73:83,0,36	0/0:6,0:6:1.95:0,2,23	1/1:15,0:9:0.94:2,1,0	0/1:27,0:25:0:1,0,0	0/1:13,0:14:0:0,0,0	1/1:25,1:24:5.90:82,6,0	0/0:20,0:20:6.41:0,6,98	1/1:15,0:14:25.44:127,25,0	0/1:10,0:10:6.19:6,0,62	0/0:3,0:2:3.01:0,3,44
chr10	58614702	.	TCACA	T	907.70	PASS	AB=0.797;AC=27;AF=0.482;AN=56;BaseQRankSum=5.572;DP=472;FS=1.641;HRun=0;HaplotypeScore=96.4823;InbreedingCoeff=0.3179;MQ=42.74;MQ0=37;MQRankSum=-0.228;QD=3.09;ReadPosRankSum=-2.195;VQSLOD=1.4751;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:32:12.04:0,12,192	0/0:7,0:7:12.04:0,12,221	0/0:7,0:1:3.01:0,3,45	0/0:9,0:1:3.01:0,3,43	0/0:23,0:21:8.81:0,9,168	1/1:5,14:18:6.02:86,6,0	1/1:16,5:19:11.50:187,12,0	0/0:30,0:28:43.90:0,44,706	1/1:4,9:12:3.01:36,3,0	1/1:9,0:11:4.18:100,4,0	0/0:6,0:16:2.86:0,3,45	1/1:4,12:17:2.83:49,3,0	1/1:12,0:10:7.43:70,7,0	0/1:11,0:10:8.44:36,0,8	0/1:12,0:13:0.22:1,0,0	0/0:25,1:26:27.80:0,28,1148	0/0:17,0:14:32.63:0,33,591	0/1:8,12:17:24.89:262,0,25	0/1:15,0:13:38.65:72,0,39	0/1:5,0:6:0.22:1,0,0	1/1:15,0:10:1.89:5,2,0	0/1:11,16:25:0:1,0,0	0/1:5,10:15:0.01:0,0,0	1/1:17,8:24:5.69:92,6,0	0/1:18,0:21:3.93:4,0,52	1/1:16,0:14:14.39:44,14,0	0/1:8,0:10:21.32:21,0,52	0/0:3,0:2:3.01:0,3,43
chr10	58614727	.	C	CAT	3221.60	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=4.713;DP=532;FS=8.465;HRun=0;HaplotypeScore=108.5785;InbreedingCoeff=0.7984;MQ=50.70;MQ0=12;MQRankSum=0.797;QD=7.80;ReadPosRankSum=-0.919;VQSLOD=2.7278;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:8,29:37:12.04:198,12,0	0/0:9,0:9:3.06:0,3,140	0/0:11,0:1:2.74:0,3,12	0/0:7,0:1:1.25:0,1,3	1/1:2,25:26:8.82:161,9,0	1/1:23,0:23:21.94:176,22,0	1/1:26,0:26:36.82:258,37,0	0/0:37,0:37:92.42:0,92,929	1/1:18,0:18:11.70:162,12,0	1/1:12,0:12:23.69:134,24,0	1/1:24,0:24:17.66:149,18,0	1/1:15,0:15:4.55:29,5,0	1/1:15,0:15:24.19:181,24,0	1/1:15,0:15:20.98:160,21,0	1/1:13,0:12:10.93:63,11,0	0/0:31,0:31:80.99:0,81,950	0/0:24,0:22:54:0,54,565	1/1:19,0:18:24.45:124,24,0	1/1:11,0:10:21.66:131,22,0	1/1:16,0:16:32.73:239,33,0	1/1:18,0:17:23.91:174,24,0	1/1:21,0:21:17.81:150,18,0	1/1:16,0:16:14.98:125,15,0	1/1:23,0:22:19.68:136,20,0	1/1:25,0:25:22.69:153,23,0	1/1:17,0:16:34.65:243,35,0	1/1:15,0:15:22.88:171,23,0	1/1:5,0:5:8.30:71,8,0
chr10	58618775	.	AAGCATAGCACATAGAGTACTG	A	574.12	PASS	AB=0.717;AC=15;AF=0.288;AN=52;BaseQRankSum=-0.508;DP=931;FS=15.150;HRun=0;HaplotypeScore=452.1090;InbreedingCoeff=0.8644;MQ=62.62;MQ0=3;MQRankSum=0.730;QD=2.33;ReadPosRankSum=5.317;VQSLOD=0.1577;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:33.06:0,33,454	0/0:18,0:18:24.04:0,24,320	./.	./.	0/0:30,0:30:18.04:0,18,251	1/1:39,0:34:15:133,15,0	1/1:20,0:18:5.99:49,6,0	0/0:49,0:48:0:0,0,0	1/1:34,0:30:17.99:155,18,0	0/0:42,0:42:39.10:0,39,629	0/0:25,0:25:30.03:0,30,388	1/1:33,0:27:17.99:155,18,0	0/0:60,0:60:75.09:0,75,977	0/0:40,0:40:57.01:0,57,649	0/0:51,0:51:54.11:0,54,770	0/0:43,0:43:45.11:0,45,676	0/0:17,0:17:9.03:0,9,146	1/1:28,0:24:5.99:49,6,0	0/0:17,0:16:15.05:0,15,270	0/0:25,0:25:21.02:0,21,295	0/0:52,0:51:48.08:0,48,667	1/1:30,0:24:9.01:83,9,0	0/1:20,13:31:0:0,0,0	1/1:29,0:25:14.98:126,15,0	0/0:25,0:25:17.98:0,18,196	0/0:36,0:36:30.04:0,30,376	0/0:40,0:40:57.06:0,57,808	0/0:26,0:26:18.04:0,18,364
chr10	58621479	.	G	GCAGAAGCCACTATTCCTTC	40766.26	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=7.589;DP=701;FS=10.484;HRun=0;HaplotypeScore=333.0389;InbreedingCoeff=0.9840;MQ=83.28;MQ0=0;MQRankSum=-17.912;QD=129.83;ReadPosRankSum=-3.677;VQSLOD=3.2527;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:81.28:0,81,4040	0/0:8,0:8:15.05:0,15,726	0/0:26,0:26:33.10:0,33,970	0/0:23,0:23:41.45:0,41,1393	0/0:15,0:15:15.78:0,16,977	0/0:14,0:14:24.08:0,24,1041	0/0:29,0:29:69.24:0,69,3403	0/0:25,0:25:33.11:0,33,1164	0/0:22,0:22:57.18:0,57,2530	1/1:24,5:29:63.22:3673,63,0	1/1:15,1:16:31.35:1947,31,0	0/0:47,0:47:99:0,108,4890	1/1:33,6:43:99:6414,102,0	1/1:17,9:29:60.21:4437,60,0	1/1:36,6:44:93.32:6285,93,0	0/0:36,0:36:90.30:0,90,4351	0/0:28,0:28:66.23:0,66,3271	0/0:34,0:34:81.28:0,81,3917	1/1:31,0:31:46.40:2321,46,0	1/1:10,0:10:18.06:983,18,0	1/1:25,0:25:42.14:1921,42,0	0/0:14,0:14:33.07:0,33,1413	0/0:9,0:9:9.03:0,9,464	0/0:20,0:20:45.15:0,45,2236	1/1:15,9:24:52.42:3576,52,0	1/1:22,5:29:63.16:3585,63,0	1/1:20,6:29:66.21:4711,66,0	1/1:4,1:5:15.05:913,15,0
chr10	58625376	.	A	AGAGTACGGG	28307.95	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-3.208;DP=745;FS=0.000;HRun=0;HaplotypeScore=210.3330;InbreedingCoeff=0.9896;MQ=87.10;MQ0=0;MQRankSum=-20.640;QD=102.19;ReadPosRankSum=-2.000;VQSLOD=4.2923;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,138,4009	0/0:12,0:12:33.11:0,33,973	0/0:31,0:31:87.30:0,87,2500	0/0:32,0:31:84.25:0,84,2260	0/0:19,0:19:57.20:0,57,1648	0/0:15,0:15:45.15:0,45,1338	0/0:35,0:35:96.33:0,96,2871	0/0:42,0:42:99:0,99,2796	0/0:23,0:23:66.21:0,66,1951	1/1:8,14:23:63.22:2873,63,0	1/1:1,7:9:9.03:327,9,0	0/0:39,0:39:99:0,105,3123	1/1:10,22:34:90.26:3846,90,0	1/1:16,15:34:75.26:3038,75,0	1/1:8,24:36:90.27:3912,90,0	0/0:27,0:27:78.25:0,78,2178	0/0:38,0:38:99:0,105,3181	0/0:19,0:19:57.20:0,57,1655	1/1:10,6:18:54.10:2000,54,0	1/1:4,17:24:42.14:1977,42,0	1/1:12,17:30:48.12:1925,48,0	0/0:29,0:29:72.06:0,72,2163	0/0:16,0:16:42.14:0,42,1249	0/0:41,0:41:99:0,120,3616	1/1:6,9:15:36.12:1570,36,0	1/1:5,19:24:72.20:3229,72,0	1/1:7,17:25:66.23:2885,66,0	1/1:3,2:5:15.05:728,15,0
chr10	58628186	.	A	AAT	18401.60	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-17.770;DP=808;FS=1.140;HRun=0;HaplotypeScore=86.2482;InbreedingCoeff=0.9996;MQ=86.34;MQ0=0;MQRankSum=-4.459;QD=55.93;ReadPosRankSum=2.883;VQSLOD=5.3221;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:57:99:0,172,2760	0/0:11,0:11:30.10:0,30,486	0/0:38,0:38:99:0,111,1715	0/0:24,0:25:66.86:0,67,1035	0/0:20,0:20:54.17:0,54,857	0/0:14,0:14:39.12:0,39,607	0/0:31,0:31:93.30:0,93,1492	0/0:25,0:25:72.24:0,72,1150	0/0:24,0:24:72.23:0,72,1147	1/1:3,29:35:99:1941,105,0	1/1:0,8:8:24.08:487,24,0	0/0:45,0:45:99:0,129,2100	1/1:0,26:28:75.26:1523,75,0	1/1:1,37:39:99:2232,111,0	1/1:0,36:38:96.33:1951,96,0	0/0:26,0:26:78.26:0,78,1249	0/0:42,0:42:99:0,126,2056	0/0:36,0:36:99:0,108,1706	1/1:6,21:27:61.94:1467,62,0	1/1:0,26:26:75.26:1524,75,0	1/1:0,31:32:87.30:1767,87,0	0/0:15,0:15:45.15:0,45,729	0/0:22,0:22:66.23:0,66,1076	0/0:48,0:48:99:0,135,2168	1/1:0,29:29:75.26:1524,75,0	1/1:0,30:30:90.29:1791,90,0	1/1:0,26:26:78.27:1585,78,0	1/1:0,10:10:30.10:609,30,0
chr10	58631323	.	CG	C	2722.85	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.986;DP=708;FS=6.984;HRun=1;HaplotypeScore=84.7274;InbreedingCoeff=0.9976;MQ=89.22;MQ0=1;MQRankSum=-5.542;QD=36.80;ReadPosRankSum=2.844;VQSLOD=4.1202;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,49:49:99:1804,129,0	0/0:7,0:7:21.07:0,21,335	0/0:28,0:28:84.29:0,84,1333	0/0:25,0:25:66.10:0,66,947	1/1:1,24:25:75.25:1041,75,0	0/0:22,0:21:66.23:0,66,1054	0/0:35,0:35:99:0,102,1605	0/0:33,0:33:99:0,99,1571	0/0:17,0:17:51.17:0,51,814	0/0:25,0:25:72.25:0,72,1150	0/0:17,0:17:47.61:0,48,669	0/0:38,0:38:99:0,114,1819	0/0:22,0:22:66.22:0,66,1049	0/0:35,0:35:99:0,105,1676	0/0:41,0:41:99:0,123,1958	0/0:32,0:32:96.27:0,96,1483	0/0:38,0:38:99:0,114,1792	0/0:17,0:17:51.17:0,51,809	0/0:18,0:18:54.17:0,54,839	0/0:20,0:20:60.20:0,60,937	0/0:21,0:21:60.20:0,60,959	0/0:20,0:20:60.20:0,60,958	0/0:21,0:21:57.19:0,57,908	0/0:28,0:27:78.26:0,78,1234	0/0:19,0:19:57.17:0,57,862	0/0:21,0:21:60.16:0,60,887	0/0:24,0:24:72.24:0,72,1127	0/0:10,0:10:30.10:0,30,462
chr10	58632627	.	G	GC	11677.54	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-8.693;DP=720;FS=11.047;HRun=0;HaplotypeScore=71.6778;InbreedingCoeff=0.9970;MQ=84.43;MQ0=0;MQRankSum=-3.442;QD=42.16;ReadPosRankSum=2.906;VQSLOD=4.9440;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,51:52:99:2155,135,0	0/0:7,0:7:21.07:0,21,291	0/0:27,0:27:72.22:0,72,967	0/0:24,0:24:71.82:0,72,959	1/1:3,23:26:63.21:1006,63,0	1/1:2,31:33:93.32:1484,93,0	1/1:0,24:24:69.24:1102,69,0	0/0:39,0:39:99:0,117,1621	1/1:1,16:17:42.14:669,42,0	0/0:30,0:30:87.29:0,87,1215	0/0:19,0:19:57.19:0,57,797	1/1:0,29:29:78.27:1243,78,0	0/0:38,0:38:99:0,114,1558	0/0:14,0:14:39.12:0,39,529	0/0:29,0:28:87.22:0,87,1160	0/0:20,1:21:15.41:0,15,792	0/0:37,0:37:99:0,108,1454	1/1:0,24:24:60.20:958,60,0	0/0:29,0:29:87.27:0,87,1174	0/0:13,0:13:39.13:0,39,544	0/0:29,0:29:84.28:0,84,1175	1/1:1,20:21:57.19:911,57,0	1/1:0,19:19:48.16:767,48,0	1/1:0,32:32:87.30:1383,87,0	0/0:13,0:13:39.13:0,39,544	0/0:39,0:39:99:0,117,1586	0/0:26,0:26:75.21:0,75,1001	0/0:9,0:9:27.09:0,27,377
chr10	58632773	.	TTTTG	T	6411.26	PASS	AB=0.918;AC=30;AF=0.536;AN=56;BaseQRankSum=9.733;DP=638;FS=3.689;HRun=0;HaplotypeScore=230.6709;InbreedingCoeff=0.2860;MQ=55.73;MQ0=4;MQRankSum=-10.503;QD=14.34;ReadPosRankSum=-2.293;VQSLOD=4.1166;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:36,0:36:39.06:945,39,0	0/0:8,0:8:24.08:0,24,540	0/0:32,0:21:40.05:0,40,513	0/0:24,0:14:23.85:0,24,376	1/1:29,0:29:7.91:729,8,0	1/1:23,0:23:69.13:840,69,0	1/1:11,0:11:33.06:366,33,0	0/0:34,0:33:93.26:0,93,1581	1/1:9,0:9:27:298,27,0	0/1:30,5:35:99:173,0,1070	0/1:22,5:27:99:206,0,637	1/1:25,1:26:60.11:708,60,0	0/1:26,3:28:99:137,0,910	0/1:22,0:22:99:103,0,575	0/1:25,1:25:99:104,0,862	0/0:22,0:22:28.08:0,28,1338	0/0:27,0:27:58.63:0,59,1394	1/1:12,0:12:31.65:297,32,0	0/1:20,1:20:43.33:43,0,544	0/1:29,4:32:99:187,0,863	0/1:9,1:9:32.25:32,0,144	1/1:10,0:10:30.01:338,30,0	1/1:18,0:18:51.03:570,51,0	1/1:8,0:7:15.02:153,15,0	0/0:27,1:27:34.96:0,35,1028	0/1:27,5:32:99:175,0,1014	0/1:29,1:30:5.48:5,0,1160	0/0:16,0:16:39:0,39,490
chr10	58632775	.	TTGTTTTTTTTTGTTTG	T	13700.44	PASS	AB=0.813;AC=19;AF=0.339;AN=56;BaseQRankSum=5.302;DP=651;FS=15.063;HRun=0;HaplotypeScore=362.1096;InbreedingCoeff=0.7754;MQ=53.05;MQ0=4;MQRankSum=-9.622;QD=59.83;ReadPosRankSum=0.347;VQSLOD=3.4416;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:16,0:37:4.76:1087,0,5	0/0:8,0:8:24.08:0,24,1764	0/0:31,0:20:40.62:0,41,1286	0/0:20,0:11:21.77:0,22,1058	1/1:13,0:29:11.60:890,12,0	1/1:8,18:26:78.27:2867,78,0	1/1:10,3:13:39.12:1004,39,0	0/0:34,0:33:96.33:0,96,4567	1/1:6,5:11:33.11:1007,33,0	0/0:35,0:35:99:0,105,4514	0/0:27,0:27:76.11:0,76,2725	1/1:13,15:28:66.23:2417,66,0	0/0:29,0:28:84.28:0,84,4301	0/0:22,0:22:63.19:0,63,2877	0/0:26,0:25:75.25:0,75,3868	0/1:22,1:23:67.14:67,0,4356	0/0:26,0:26:74.80:0,75,4409	0/1:13,3:16:39.10:954,0,39	0/0:19,0:18:54.10:0,54,1891	0/0:33,0:32:90.29:0,90,4813	0/0:10,0:9:22.31:0,22,536	1/1:3,8:11:33.10:1084,33,0	1/1:12,10:22:63.21:1779,63,0	1/1:11,2:12:27.09:544,27,0	0/0:26,0:25:72.22:0,72,4232	0/0:31,0:32:93.28:0,93,4031	0/0:29,0:29:84.28:0,84,4856	0/0:14,0:14:42.08:0,42,1716
chr10	58632777	.	G	GTT	11239.19	PASS	AB=1.000;AC=34;AF=0.607;AN=56;BaseQRankSum=-2.177;DP=658;FS=0.330;HRun=9;HaplotypeScore=218.8449;InbreedingCoeff=0.5214;MQ=53.49;MQ0=4;MQRankSum=-4.163;QD=24.76;ReadPosRankSum=-3.516;VQSLOD=1.4391;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:80.88:0,81,426	0/0:7,0:8:23.80:0,24,235	0/0:28,0:19:28.46:0,28,235	0/0:22,0:11:20.57:0,21,197	0/0:28,0:28:63.25:0,63,322	0/1:26,0:26:28.26:28,0,140	1/1:12,0:12:5.78:49,6,0	0/0:33,0:34:77.83:0,78,792	0/1:13,0:13:17.24:42,0,17	1/1:27,14:42:99:1458,111,0	1/1:18,8:26:66.09:902,66,0	0/1:29,0:29:87.29:87,0,87	1/1:12,16:28:84.02:1150,84,0	1/1:11,9:21:57.06:807,57,0	1/1:11,16:26:69.21:994,69,0	0/0:23,0:23:65.98:0,66,683	0/0:24,0:24:64.04:0,64,672	0/1:16,0:17:23.93:24,0,31	1/1:17,4:20:33.75:576,34,0	1/1:11,21:32:89.77:1279,90,0	1/1:8,2:9:11.99:143,12,0	0/1:12,0:12:17.22:46,0,17	0/1:23,0:23:12.38:118,0,12	1/1:15,0:14:4.91:67,5,0	1/1:10,14:24:65.38:928,65,0	1/1:18,12:31:79.49:1067,79,0	1/1:8,20:28:80.92:1146,81,0	1/1:7,7:14:22.89:328,23,0
chr10	58632785	.	TTG	T	2297.95	PASS	AB=0.920;AC=25;AF=0.446;AN=56;BaseQRankSum=6.255;DP=641;FS=13.734;HRun=0;HaplotypeScore=237.0887;InbreedingCoeff=-0.2490;MQ=53.18;MQ0=4;MQRankSum=-7.090;QD=4.67;ReadPosRankSum=-3.004;VQSLOD=1.3794;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:34,0:34:11.91:261,12,0	0/0:8,0:8:23.87:0,24,366	0/0:27,0:17:37.99:0,38,419	0/0:24,0:15:33.24:0,33,371	0/1:25,2:27:20.68:185,0,21	1/1:23,0:23:42.49:237,42,0	0/1:14,0:14:33.50:33,0,104	0/0:32,0:31:80.96:0,81,1166	0/1:15,0:15:53.66:54,0,74	0/1:37,4:41:99:204,0,463	0/1:22,4:26:99:253,0,133	1/1:23,0:23:34.88:236,35,0	0/1:28,2:29:99:102,0,293	0/1:17,6:23:99:113,0,207	0/1:24,3:26:75.04:75,0,290	0/0:24,0:24:58.52:0,59,1088	0/0:26,0:26:73.09:0,73,1104	0/1:13,0:13:39.72:40,0,67	0/1:16,6:21:99:151,0,236	0/1:34,2:35:56.23:56,0,406	0/1:8,2:9:41.06:41,0,84	0/1:12,0:12:53.80:71,0,54	1/1:20,0:20:4.55:107,5,0	0/1:14,0:13:9.68:10,0,79	0/1:19,5:23:44.67:45,0,206	0/1:28,2:30:99:138,0,350	0/1:27,1:28:64.37:64,0,246	0/0:8,0:8:20.21:0,20,130
chr10	58632789	.	TTG	T	608.50	PASS	AB=0.981;AC=11;AF=0.196;AN=56;BaseQRankSum=12.137;DP=627;FS=17.312;HRun=0;HaplotypeScore=242.1597;InbreedingCoeff=0.2017;MQ=52.00;MQ0=3;MQRankSum=-8.349;QD=3.36;ReadPosRankSum=3.068;VQSLOD=1.2058;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:37,0:37:99:115,0,308	0/0:8,0:8:24.07:0,24,425	0/0:26,0:17:44.82:0,45,691	0/0:23,0:16:39.52:0,40,660	0/1:31,0:31:62.76:63,0,332	1/1:21,2:23:38:225,38,0	0/1:11,0:11:8.69:9,0,103	0/0:30,0:29:87.25:0,87,1473	0/1:13,0:13:26.45:26,0,79	0/0:40,0:40:65.69:0,66,1572	0/0:21,0:21:35.84:0,36,661	1/1:20,1:21:21.36:166,21,0	0/0:28,0:27:75.93:0,76,1123	0/0:23,0:23:56.43:0,56,763	0/0:25,0:24:64.71:0,65,1033	0/0:24,0:24:58.09:0,58,1226	0/0:26,0:26:75.15:0,75,1344	0/1:12,1:13:21.52:22,0,113	0/0:21,0:20:49.68:0,50,770	0/0:36,0:35:98.02:0,98,1557	0/0:13,0:12:26.37:0,26,387	0/1:14,1:15:65.15:78,0,65	0/1:17,0:17:10.50:64,0,10	0/0:12,0:12:1.08:0,1,92	0/0:26,0:25:65.60:0,66,1041	0/0:29,0:29:81.94:0,82,1224	0/0:27,0:27:76.46:0,76,1115	0/0:8,0:8:24.08:0,24,429
chr10	58632807	.	T	TA	15988.21	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=9.077;DP=677;FS=8.842;HRun=1;HaplotypeScore=194.2696;InbreedingCoeff=0.9989;MQ=62.36;MQ0=0;MQRankSum=-10.483;QD=30.28;ReadPosRankSum=3.450;VQSLOD=3.6313;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,32:36:89.83:969,90,0	0/0:12,0:12:36.11:0,36,453	0/0:29,0:22:34.74:0,35,668	0/0:26,0:21:49.38:0,49,572	1/1:0,35:35:88.03:908,88,0	1/1:0,26:26:60.19:750,60,0	1/1:0,17:17:33.11:460,33,0	0/0:27,0:27:78.16:0,78,896	1/1:0,17:17:36.12:486,36,0	1/1:4,32:36:96.28:1290,96,0	1/1:1,18:19:50.73:563,51,0	1/1:5,20:25:63.16:753,63,0	1/1:4,21:25:66:863,66,0	1/1:7,15:22:47.86:622,48,0	1/1:6,22:27:55.87:754,56,0	0/0:25,1:26:42.05:0,42,873	0/0:29,0:29:87.17:0,87,1033	1/1:0,18:18:42.14:576,42,0	1/1:4,11:15:45.14:607,45,0	1/1:3,35:38:99:1333,108,0	1/1:2,14:16:36.12:507,36,0	1/1:0,23:23:48.03:605,48,0	1/1:0,24:24:41.71:549,42,0	1/1:0,13:13:24.08:326,24,0	1/1:5,16:21:48.08:615,48,0	1/1:8,25:33:90.28:1208,90,0	1/1:9,22:31:75.04:965,75,0	1/1:1,9:10:23.22:278,23,0
chr10	58634233	.	G	GCACA	14514.61	PASS	AB=0.582;AC=35;AF=0.648;AN=54;BaseQRankSum=0.285;DP=848;FS=0.412;HRun=0;HaplotypeScore=149.8543;InbreedingCoeff=0.2369;MQ=64.06;MQ0=3;MQRankSum=0.485;QD=20.19;ReadPosRankSum=2.336;VQSLOD=4.5964;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:68:99:330,0,175	0/0:11,0:10:27.09:0,27,442	./.	0/0:15,0:8:3:0,3,29	1/1:8,0:34:16.78:179,17,0	1/1:9,0:30:49.50:225,49,0	0/1:10,0:39:44.63:169,0,45	0/0:21,0:23:30.09:0,30,451	0/1:6,0:38:46.24:214,0,46	1/1:15,19:37:71.71:1464,72,0	1/1:9,16:27:44.56:981,45,0	1/1:5,0:29:43.98:222,44,0	1/1:11,21:36:48.04:1119,48,0	1/1:7,25:38:71.34:1602,71,0	1/1:9,27:40:68.71:1574,69,0	0/0:35,0:38:84.26:0,84,1319	0/0:23,0:25:60.19:0,60,935	0/1:11,0:35:24.64:192,0,25	1/1:10,7:19:33.11:716,33,0	0/1:9,14:26:14.13:602,0,14	1/1:14,23:43:50.20:1149,50,0	0/1:4,0:25:35.65:196,0,36	0/1:8,0:28:54.83:130,0,55	0/1:16,0:38:99:169,0,177	1/1:7,9:18:29.57:615,30,0	1/1:11,17:31:55.58:1275,56,0	1/1:10,14:30:44.41:898,44,0	0/1:1,7:8:25.66:492,0,26
chr10	58635011	.	AGG	A	9862.76	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=14.347;DP=628;FS=0.310;HRun=4;HaplotypeScore=77.6903;InbreedingCoeff=0.9109;MQ=73.20;MQ0=2;MQRankSum=0.810;QD=36.00;ReadPosRankSum=3.250;VQSLOD=4.2166;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,42:42:99:1546,105,0	0/0:13,0:13:36.12:0,36,672	0/0:12,0:12:7.32:0,7,212	0/1:7,0:8:45.91:46,0,111	1/1:0,24:24:66.22:964,66,0	1/1:0,28:28:66.22:972,66,0	1/1:0,22:22:51.17:751,51,0	0/0:26,0:26:75.26:0,75,1389	1/1:1,21:22:54.18:795,54,0	0/0:25,0:25:75.26:0,75,1400	0/0:13,0:13:30.10:0,30,559	1/1:1,29:30:75.25:1104,75,0	0/0:32,0:32:90.26:0,90,1567	0/0:25,0:25:75.26:0,75,1402	0/0:29,0:29:87.30:0,87,1630	0/0:21,0:21:60.21:0,60,1119	0/0:22,0:22:63.22:0,63,1170	1/1:3,26:29:81.27:1190,81,0	0/0:18,0:18:54.19:0,54,1010	0/0:23,0:23:69.24:0,69,1283	0/0:22,0:22:66.21:0,66,1197	1/1:1,14:14:39.11:553,39,0	1/1:0,19:19:54.02:793,54,0	1/1:1,34:34:78.26:1149,78,0	0/0:26,0:26:78.27:0,78,1437	0/0:20,0:20:60.20:0,60,1084	0/0:21,0:20:63.22:0,63,1180	0/0:6,0:6:18.06:0,18,332
chr10	58635690	.	CCCCCA	C	7663.93	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=13.263;DP=502;FS=1.245;HRun=0;HaplotypeScore=99.0505;InbreedingCoeff=0.9873;MQ=77.90;MQ0=1;MQRankSum=-5.787;QD=38.90;ReadPosRankSum=4.437;VQSLOD=4.8871;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,34:37:54.19:1093,54,0	0/0:5,0:5:15.02:0,15,319	0/0:28,0:28:36.70:0,37,1081	0/0:11,0:10:22.70:0,23,463	1/1:3,18:20:36.12:729,36,0	1/1:1,18:19:39.13:789,39,0	1/1:3,19:22:42.01:764,42,0	0/0:20,0:20:45.15:0,45,1279	1/1:2,16:18:45.04:827,45,0	0/0:17,0:17:45.14:0,45,1229	0/0:13,0:13:39.13:0,39,1105	1/1:1,14:15:36.12:728,36,0	0/0:16,0:16:42.13:0,42,1098	0/0:12,0:12:33.11:0,33,933	0/0:23,0:23:63.22:0,63,1791	0/0:14,0:14:42.13:0,42,1175	0/0:41,0:41:99:0,123,3546	1/1:0,18:18:33.11:669,33,0	0/0:9,0:9:24.04:0,24,653	0/0:16,0:16:45.15:0,45,1316	0/0:25,0:25:63.21:0,63,1811	1/1:2,12:14:33.11:667,33,0	1/1:1,11:12:21.07:425,21,0	1/1:1,20:21:48.64:973,49,0	0/0:13,0:13:36.12:0,36,1070	0/0:13,0:13:33.11:0,33,982	0/0:26,0:26:72.23:0,72,2091	0/0:3,0:3:8.96:0,9,158
chr10	58635691	.	CCCCA	C	3730.74	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=14.664;DP=498;FS=1.735;HRun=0;HaplotypeScore=102.9500;InbreedingCoeff=0.9841;MQ=78.05;MQ0=1;MQRankSum=-6.324;QD=19.23;ReadPosRankSum=5.484;VQSLOD=3.1406;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:35,0:35:54.11:543,54,0	0/0:5,0:5:15.05:0,15,331	0/0:27,0:27:48.24:0,48,1148	0/0:12,0:11:26.77:0,27,471	1/1:21,0:20:15.87:339,16,0	1/1:19,0:19:39.08:391,39,0	1/1:21,1:22:16.64:337,17,0	0/0:18,0:18:45.15:0,45,1132	1/1:16,2:18:33.15:400,33,0	0/0:16,0:16:48.15:0,48,1151	0/0:13,0:13:39.13:0,39,946	1/1:14,1:15:36.07:362,36,0	0/0:17,0:17:45.15:0,45,1024	0/0:12,0:12:33.11:0,33,825	0/0:23,0:23:63.22:0,63,1571	0/0:15,0:15:45.14:0,45,1045	0/0:42,0:42:99:0,126,3153	1/1:18,0:18:33.07:332,33,0	0/0:9,0:9:24.08:0,24,595	0/0:16,0:16:45.15:0,45,1165	0/0:24,0:24:66.21:0,66,1634	1/1:12,1:13:33.07:332,33,0	1/1:11,1:12:21.04:211,21,0	1/1:21,0:21:48.57:483,49,0	0/0:13,0:13:36.12:0,36,929	0/0:13,0:13:36.11:0,36,864	0/0:26,0:26:72.25:0,72,1829	0/0:3,0:3:9.03:0,9,186
chr10	58636040	.	ACAATGGAAGTGAACGG	A	11403.59	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=13.391;DP=502;FS=9.457;HRun=0;HaplotypeScore=221.3068;InbreedingCoeff=0.9227;MQ=79.94;MQ0=0;MQRankSum=-14.301;QD=75.52;ReadPosRankSum=2.780;VQSLOD=3.2011;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,17:23:38.59:1595,39,0	0/0:3,0:3:9.03:0,9,602	0/0:20,0:20:57.19:0,57,3570	0/0:14,0:14:30.06:0,30,1662	1/1:1,7:8:3.48:142,3,0	1/1:1,10:11:27.09:1156,27,0	1/1:6,15:21:27.09:1224,27,0	0/0:32,0:32:90.30:0,90,5789	1/1:1,18:19:48.16:2144,48,0	0/0:13,0:13:39.13:0,39,2919	0/0:10,0:10:30.10:0,30,2196	1/1:0,21:21:60.21:2795,60,0	0/0:26,0:26:78.27:0,78,5068	0/0:23,0:23:69.24:0,69,4724	0/0:21,0:21:63.22:0,63,4889	0/0:29,0:28:81.75:0,82,6146	0/0:46,0:46:99:0,135,10016	1/1:5,12:17:27.09:1211,27,0	0/0:13,0:13:36.12:0,36,2451	0/0:10,0:10:30.10:0,30,2137	0/0:35,0:35:96.32:0,96,7324	1/1:1,4:5:9.50:427,10,0	1/1:2,5:7:2.62:141,3,0	1/1:4,15:19:11.69:567,12,0	0/0:14,0:14:39.13:0,39,3001	0/0:20,0:20:60.21:0,60,4341	0/0:17,0:17:51.18:0,51,3737	0/0:5,0:5:15.05:0,15,1001
chr10	58636263	.	TATTC	T	7286.55	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=11.852;DP=710;FS=0.000;HRun=0;HaplotypeScore=118.7990;InbreedingCoeff=0.9680;MQ=66.80;MQ0=0;MQRankSum=0.922;QD=23.73;ReadPosRankSum=1.232;VQSLOD=4.6580;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:39:60.18:0,60,996	1/1:2,4:6:12.04:194,12,0	0/0:16,0:14:14.08:0,14,297	0/0:8,0:7:3:0,3,26	0/0:9,0:29:68.37:0,68,856	1/1:11,27:38:60.20:972,60,0	1/1:5,21:26:42.14:675,42,0	1/1:20,22:42:65.99:769,66,0	1/1:4,15:19:39.13:632,39,0	0/0:30,0:30:75.23:0,75,1614	0/0:21,0:21:45.13:0,45,976	1/1:9,18:27:39.13:632,39,0	0/0:27,0:27:63.18:0,63,1312	0/0:26,0:26:57.17:0,57,1264	0/0:26,0:26:51.14:0,51,1089	1/1:11,21:32:51.17:826,51,0	1/1:5,15:20:30.10:486,30,0	1/1:6,13:19:39.11:590,39,0	0/0:22,0:22:33.06:0,33,608	0/0:34,0:34:87.24:0,87,1831	0/0:16,0:16:33.10:0,33,751	1/1:8,18:26:42.14:680,42,0	1/1:14,17:31:21.96:343,22,0	1/1:7,14:21:30.10:486,30,0	0/0:27,0:27:60.18:0,60,1311	0/0:25,0:25:63.21:0,63,1474	0/0:33,0:33:78.23:0,78,1738	0/0:24,0:24:51.12:0,51,1044
chr10	58638373	.	T	TTGTCCAC	29286.63	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-6.567;DP=701;FS=13.530;HRun=0;HaplotypeScore=161.9162;InbreedingCoeff=0.9854;MQ=76.14;MQ0=0;MQRankSum=-18.565;QD=89.56;ReadPosRankSum=-0.624;VQSLOD=5.0206;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:13,26:40:78.18:2884,78,0	0/0:11,0:11:30.10:0,30,739	0/0:21,0:21:57.20:0,57,1423	0/0:25,0:25:62.23:0,62,1469	1/1:7,11:18:29.74:1095,30,0	0/0:30,0:30:84.25:0,84,2079	0/0:29,0:29:81.28:0,81,2090	0/0:24,0:24:66.21:0,66,1590	0/0:41,0:41:99:0,123,3163	1/1:12,14:27:69.22:2467,69,0	1/1:8,8:16:27.08:993,27,0	0/0:28,0:28:81.28:0,81,2038	1/1:9,20:30:75.26:2824,75,0	1/1:3,30:34:87.30:3386,87,0	1/1:5,28:34:96.33:3770,96,0	0/0:38,0:38:99:0,105,2659	0/0:31,0:31:81.28:0,81,2091	0/0:22,0:22:63.22:0,63,1619	1/1:13,5:18:51.17:1826,51,0	1/1:6,13:20:45.15:1634,45,0	1/1:3,14:19:36.12:1379,36,0	0/0:25,0:25:69.21:0,69,1663	0/0:19,0:19:54.17:0,54,1340	0/0:30,0:30:87.28:0,87,2153	1/1:5,19:25:63.22:2476,63,0	1/1:11,13:26:72.25:2607,72,0	1/1:5,11:18:45.15:1706,45,0	1/1:0,2:2:6.02:239,6,0
chr10	58640311	.	TG	T	6019.21	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=14.079;DP=746;FS=5.442;HRun=2;HaplotypeScore=95.6027;InbreedingCoeff=0.9994;MQ=85.98;MQ0=0;MQRankSum=-11.233;QD=35.83;ReadPosRankSum=-2.272;VQSLOD=4.0856;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,150,2225	0/0:9,0:9:27.09:0,27,399	0/0:33,0:33:96.29:0,96,1395	0/0:24,0:24:60.93:0,61,878	0/0:32,0:32:93.32:0,93,1393	1/1:2,24:26:78.16:953,78,0	1/1:4,24:28:84.26:1074,84,0	0/0:37,0:37:99:0,111,1558	1/1:3,10:13:36.10:448,36,0	0/0:27,0:27:81.27:0,81,1195	0/0:27,0:27:75.25:0,75,1105	1/1:3,22:25:75.23:956,75,0	0/0:20,0:20:38.29:0,38,830	0/0:31,0:31:90.27:0,90,1288	0/0:37,0:37:99:0,111,1662	0/0:23,0:23:69.12:0,69,966	0/0:40,0:40:99:0,114,1707	1/1:2,13:13:39.09:488,39,0	0/0:26,0:26:75.15:0,75,1092	0/0:27,0:27:81.27:0,81,1211	0/0:37,0:37:99:0,108,1597	1/1:0,22:22:63.03:755,63,0	1/1:0,23:23:69.16:873,69,0	1/1:2,14:16:39.05:472,39,0	0/0:28,0:28:81.26:0,81,1192	0/0:24,0:24:66.22:0,66,989	0/0:33,0:33:99:0,99,1481	0/0:8,0:8:24.08:0,24,360
chr10	58640334	.	GC	G	6331.21	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=15.854;DP=706;FS=2.145;HRun=7;HaplotypeScore=89.8318;InbreedingCoeff=0.9996;MQ=84.46;MQ0=0;MQRankSum=-8.278;QD=25.53;ReadPosRankSum=1.930;VQSLOD=5.3148;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,46:51:99:1255,123,0	0/0:9,0:9:27.09:0,27,340	0/0:27,0:27:69.16:0,69,828	0/0:22,0:22:57.18:0,57,702	1/1:3,26:29:72.16:735,72,0	1/1:4,24:28:72.15:727,72,0	1/1:3,24:27:69.15:703,69,0	0/0:44,0:44:99:0,114,1384	1/1:0,10:10:27.06:275,27,0	0/0:26,1:27:38.60:0,39,788	0/0:23,0:23:57.17:0,57,703	1/1:2,22:24:66.08:660,66,0	0/0:21,0:21:54.17:0,54,676	0/0:25,0:25:72.19:0,72,857	0/0:36,0:36:99:0,99,1234	0/0:21,0:21:60.18:0,60,742	0/0:34,0:34:99:0,102,1256	1/1:1,17:16:42.05:417,42,0	0/0:24,0:24:51.06:0,51,587	0/0:27,0:27:75.24:0,75,943	0/0:30,0:30:84.26:0,84,1044	1/1:0,22:22:66.11:662,66,0	1/1:3,22:25:62.94:591,63,0	1/1:3,11:14:30.06:306,30,0	0/0:26,0:26:72.18:0,72,863	0/0:20,0:20:57.18:0,57,717	0/0:29,0:29:75.21:0,75,914	0/0:13,0:13:36.12:0,36,452
chr10	58643269	.	CTGCTA	C	14190.64	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=19.369;DP=708;FS=18.199;HRun=0;HaplotypeScore=170.0793;InbreedingCoeff=0.9910;MQ=79.36;MQ0=0;MQRankSum=-19.863;QD=50.50;ReadPosRankSum=1.094;VQSLOD=4.0228;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,120,3641	0/0:13,0:13:36.12:0,36,1127	0/0:16,0:16:48.15:0,48,1375	0/0:27,0:27:69.24:0,69,1957	0/0:18,0:18:51.18:0,51,1596	0/0:18,0:18:51.18:0,51,1598	0/0:29,0:29:84.29:0,84,2632	0/0:29,0:29:81.28:0,81,2539	0/0:33,0:33:96.33:0,96,2988	1/1:2,24:26:69.24:1455,69,0	1/1:0,9:9:21.07:447,21,0	0/0:41,0:41:99:0,102,3161	1/1:2,22:24:63.22:1341,63,0	1/1:3,39:42:99:2364,111,0	1/1:3,33:36:90.31:1917,90,0	0/0:28,0:28:78.26:0,78,2363	0/0:23,0:23:66.23:0,66,2065	0/0:29,0:29:87.30:0,87,2725	1/1:3,16:19:48.15:984,48,0	1/1:1,11:12:33.11:702,33,0	1/1:13,15:28:24.08:511,24,0	0/0:24,0:24:66.23:0,66,2047	0/0:21,0:21:48.16:0,48,1502	0/0:35,0:35:93.32:0,93,2862	1/1:3,29:32:78.27:1661,78,0	1/1:4,20:24:60.21:1276,60,0	1/1:0,23:23:63.08:1341,63,0	1/1:1,5:6:9.03:192,9,0
chr10	58643820	.	A	ACCTCATCTAAC	25808.66	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-6.914;DP=766;FS=6.923;HRun=0;HaplotypeScore=232.9527;InbreedingCoeff=0.9840;MQ=78.32;MQ0=0;MQRankSum=-17.251;QD=79.41;ReadPosRankSum=-0.351;VQSLOD=3.8107;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,120,3557	0/0:12,0:12:18.06:0,18,572	0/0:26,0:26:42.13:0,42,1115	0/0:32,0:32:50.06:0,50,1594	0/0:32,0:32:78.22:0,78,2574	0/0:22,0:22:51.17:0,51,1681	0/0:38,0:38:99:0,102,3170	0/0:39,0:39:87.25:0,87,2270	0/0:20,0:20:48.16:0,48,1536	1/1:20,10:31:45.13:1904,45,0	1/1:9,5:14:27.08:874,27,0	0/0:22,0:22:48.15:0,48,1489	1/1:21,19:42:69.24:3639,69,0	1/1:13,14:28:54.18:2650,54,0	1/1:9,17:27:54.14:2654,54,0	0/0:32,0:32:87.28:0,87,2584	0/0:39,0:39:99:0,105,3294	0/0:20,0:20:45.15:0,45,1431	1/1:13,7:23:45.11:1940,45,0	1/1:16,16:32:63.21:2557,63,0	1/1:25,5:31:30.57:1283,31,0	0/0:19,0:19:51.18:0,51,1588	0/0:15,0:15:36.12:0,36,1076	0/0:26,0:26:57.20:0,57,1818	1/1:12,17:32:60.20:2798,60,0	1/1:17,13:30:57.18:2849,57,0	1/1:8,10:23:48.16:2331,48,0	1/1:8,3:12:6.02:330,6,0
chr10	58644195	.	TG	T	10320.47	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=18.153;DP=683;FS=2.809;HRun=3;HaplotypeScore=91.1386;InbreedingCoeff=0.9993;MQ=82.62;MQ0=0;MQRankSum=-3.651;QD=33.29;ReadPosRankSum=3.724;VQSLOD=5.2562;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:90.29:0,90,1267	0/0:8,0:8:21.04:0,21,279	0/0:18,0:18:51.07:0,51,630	0/0:20,0:20:42.09:0,42,585	0/0:21,0:21:60.16:0,60,839	0/0:27,0:27:81.26:0,81,1148	0/0:27,0:27:75.24:0,75,1059	0/0:29,0:29:84.27:0,84,1192	0/0:30,0:30:87.25:0,87,1195	1/1:0,30:30:87.27:1079,87,0	1/1:0,13:13:39.12:484,39,0	0/0:34,0:34:99:0,102,1469	1/1:0,31:31:84.26:1041,84,0	1/1:3,31:34:84.26:1041,84,0	1/1:0,17:17:45.14:558,45,0	0/0:20,0:20:60.17:0,60,827	0/0:30,0:30:90.30:0,90,1294	0/0:26,0:26:75.23:0,75,1057	1/1:1,22:23:66.19:806,66,0	1/1:0,25:25:63.20:776,63,0	1/1:0,45:45:99:1562,126,0	0/0:21,0:21:63.20:0,63,888	0/0:12,0:12:36.10:0,36,499	0/0:20,0:20:60.19:0,60,846	1/1:1,23:24:60.19:744,60,0	1/1:2,24:26:72.23:891,72,0	1/1:0,32:32:81.21:1004,81,0	1/1:0,10:10:27.08:335,27,0
chr10	58644758	.	GGA	G	31171.30	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=2.612;DP=869;FS=7.506;HRun=0;HaplotypeScore=160.8510;InbreedingCoeff=0.9982;MQ=82.69;MQ0=0;MQRankSum=-11.608;QD=38.11;ReadPosRankSum=5.873;VQSLOD=6.1150;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,54:55:99:1971,135,0	1/1:2,8:10:24.08:353,24,0	0/0:22,0:22:66.22:0,66,1133	0/0:29,0:29:78.23:0,78,1378	1/1:0,15:15:38.87:574,39,0	1/1:0,21:21:60.20:877,60,0	1/1:2,36:38:93.31:1363,93,0	1/1:2,22:24:66.22:971,66,0	1/1:3,46:49:99:1942,132,0	1/1:0,23:23:64.75:909,65,0	1/1:0,11:11:33.11:486,33,0	1/1:3,56:59:99:2378,163,0	1/1:2,39:41:99:1499,102,0	1/1:0,36:36:99:1501,102,0	1/1:0,42:42:99:1692,117,0	1/1:1,29:30:84.28:1231,84,0	1/1:2,39:41:99:1588,108,0	1/1:0,19:19:48.16:701,48,0	1/1:2,18:20:54.09:747,54,0	1/1:1,10:11:27.09:397,27,0	1/1:2,82:84:99:2905,199,0	1/1:0,28:28:72.24:1060,72,0	1/1:1,17:18:39.13:567,39,0	1/1:1,42:43:99:1546,105,0	1/1:1,28:29:75.25:1099,75,0	1/1:0,34:34:99:1406,99,0	1/1:3,18:21:48.16:706,48,0	1/1:1,15:16:48.16:702,48,0
chr10	58644759	.	GA	G	4697	PASS	AB=1.000;AC=50;AF=0.893;AN=56;BaseQRankSum=9.613;DP=864;FS=10.466;HRun=1;HaplotypeScore=238.2623;InbreedingCoeff=0.6974;MQ=83.27;MQ0=0;MQRankSum=-10.995;QD=5.79;ReadPosRankSum=8.243;VQSLOD=0.5546;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:55,0:55:96.52:304,97,0	1/1:9,1:10:18.22:59,18,0	0/0:23,0:23:69.08:0,69,1024	0/0:30,0:30:87.26:0,87,1323	1/1:15,0:15:28.59:90,29,0	1/1:21,0:21:43.74:137,44,0	1/1:38,0:38:46.89:189,47,0	0/1:24,0:24:0.29:98,0,0	1/1:48,0:48:55:258,55,0	1/1:23,0:23:17.68:129,18,0	1/1:11,0:11:24.42:77,24,0	1/1:57,1:58:99:391,120,0	1/1:41,0:41:74.82:235,75,0	1/1:36,0:36:75.49:238,75,0	1/1:42,0:42:71.94:248,72,0	1/1:29,0:29:61.50:192,62,0	1/1:39,0:38:79.68:251,80,0	1/1:19,0:19:34.86:109,35,0	0/1:20,0:20:9.80:82,0,10	1/1:11,0:11:19.98:63,20,0	1/1:82,1:83:99:457,145,0	1/1:28,0:28:53.28:168,53,0	1/1:17,1:18:27.89:87,28,0	1/1:42,0:42:77.71:245,78,0	1/1:29,0:29:54.84:172,55,0	1/1:34,0:34:60.01:219,60,0	1/1:21,0:21:15.02:90,15,0	1/1:15,1:16:35.52:112,36,0
chr10	58645396	.	GT	G	9393.24	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=13.940;DP=765;FS=6.722;HRun=1;HaplotypeScore=140.8437;InbreedingCoeff=0.9999;MQ=88.27;MQ0=0;MQRankSum=-3.001;QD=29.35;ReadPosRankSum=4.545;VQSLOD=4.3485;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,132,2001	0/0:10,0:10:30.10:0,30,467	0/0:25,0:24:72.16:0,72,1000	0/0:29,0:30:74.74:0,75,1012	0/0:19,0:19:54.18:0,54,820	0/0:20,0:20:60.17:0,60,893	0/0:31,0:31:93.26:0,93,1409	0/0:32,0:32:96.31:0,96,1407	0/0:25,0:25:75.24:0,75,1161	1/1:1,19:20:51.67:575,52,0	1/1:1,12:13:36.09:424,36,0	0/0:43,0:43:99:0,124,1830	1/1:1,28:29:56.17:704,56,0	1/1:1,34:35:86.38:1028,86,0	1/1:0,39:39:99:1297,108,0	0/0:36,1:37:99:0,108,1719	0/0:29,0:28:87.30:0,87,1386	0/0:22,0:22:66.09:0,66,945	1/1:4,21:25:56.84:643,57,0	1/1:1,22:23:60.55:754,61,0	1/1:3,40:43:91.48:1125,91,0	0/0:23,0:23:66.22:0,66,1024	0/0:25,0:25:69.22:0,69,1064	0/0:28,0:28:84.27:0,84,1315	1/1:0,21:21:54.16:645,54,0	1/1:0,34:34:99:1156,102,0	1/1:0,22:22:47.98:548,48,0	1/1:0,16:16:42.12:495,42,0
chr10	58645861	.	T	TACAC	2580.76	PASS	AC=40;AF=0.800;AN=50;BaseQRankSum=-2.983;DP=654;FS=3.901;HRun=0;HaplotypeScore=142.2028;InbreedingCoeff=0.4431;MQ=61.59;MQ0=8;MQRankSum=1.962;QD=5.48;ReadPosRankSum=-0.475;VQSLOD=2.6963;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:32:2.59:0,3,51	1/1:10,0:10:3.01:62,3,0	./.	./.	0/0:17,0:20:6.01:0,6,55	1/1:21,0:21:4.83:58,5,0	1/1:34,0:32:2.82:52,3,0	1/1:32,0:32:12.04:189,12,0	0/0:12,0:15:2.93:0,3,27	1/1:17,0:22:17.47:161,17,0	1/1:3,1:7:5.75:82,6,0	1/1:33,0:31:23.08:424,23,0	1/1:22,8:34:8.84:154,9,0	1/1:14,10:27:5.75:82,6,0	1/1:13,6:24:12.04:280,12,0	0/0:17,0:16:3:0,3,27	1/1:23,0:23:3.13:51,3,0	0/0:21,0:21:2.55:0,3,27	1/1:19,0:18:6.02:113,6,0	1/1:16,3:20:4.26:73,4,0	1/1:38,0:38:6.01:69,6,0	./.	1/1:13,0:13:3:28,3,0	1/1:29,0:28:7.44:107,7,0	1/1:15,2:24:9.24:153,9,0	1/1:28,0:28:25.47:358,25,0	1/1:8,5:18:7.17:84,7,0	1/1:15,0:15:9.48:131,9,0
chr10	58645905	.	CACACGT	C	1855.19	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=0.559;DP=695;FS=4.088;HRun=0;HaplotypeScore=137.8414;InbreedingCoeff=0.2749;MQ=58.29;MQ0=21;MQRankSum=0.378;QD=10.14;ReadPosRankSum=0.420;VQSLOD=2.6065;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:33:63.21:0,63,1063	0/0:5,0:5:6.49:0,6,154	0/0:39,0:16:48.13:0,48,724	0/0:35,0:17:6.02:0,6,403	0/0:14,0:14:27.09:0,27,459	0/1:18,0:18:26:214,0,26	1/1:33,0:31:40.72:535,41,0	0/0:22,0:22:62.53:0,63,972	0/0:24,0:24:54.17:0,54,814	0/0:23,0:22:60.12:0,60,1150	0/0:10,0:10:15.05:0,15,329	0/1:36,0:34:99:403,0,331	0/0:31,0:31:57.59:0,58,1144	0/0:35,0:35:57.19:0,57,1041	0/0:35,0:35:75.25:0,75,1450	1/1:2,14:15:2.74:75,3,0	0/0:23,0:22:35.54:0,36,455	1/1:2,21:23:0.48:72,0,0	0/0:21,0:19:57.19:0,57,1084	0/0:13,0:13:21.07:0,21,491	0/0:60,0:60:99:0,108,1923	0/1:15,0:15:46.20:182,0,46	0/1:14,0:14:22.16:237,0,22	0/1:28,0:27:99:285,0,166	0/0:30,0:30:45.44:0,45,913	0/0:25,0:25:69.22:0,69,1488	0/0:19,0:19:24.85:0,25,480	0/0:14,0:14:33.11:0,33,823
chr10	58645909	.	CGT	C	2268.49	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=1.722;DP=616;FS=4.558;HRun=0;HaplotypeScore=88.0313;InbreedingCoeff=0.9132;MQ=66.03;MQ0=19;MQRankSum=-0.467;QD=14.64;ReadPosRankSum=0.062;VQSLOD=3.0417;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:62.59:0,63,892	0/0:3,0:3:5.99:0,6,94	0/0:43,0:20:22.62:0,23,815	0/0:38,0:20:15.05:0,15,542	0/0:11,0:11:26.56:0,27,336	1/1:11,0:11:20.28:242,20,0	1/1:27,2:27:48.14:655,48,0	0/0:18,0:18:48.16:0,48,790	0/0:23,0:23:56.86:0,57,827	0/0:16,0:15:34.65:0,35,563	0/0:8,0:8:18.06:0,18,272	1/1:32,2:32:49.77:633,50,0	0/0:25,0:25:56.85:0,57,889	0/0:29,0:29:63.21:0,63,971	0/0:36,0:36:78.26:0,78,1198	1/1:15,0:15:2.79:29,3,0	0/0:20,0:19:35.95:0,36,475	1/1:23,0:23:3:30,3,0	0/0:20,0:18:42.14:0,42,676	0/0:11,0:11:23.55:0,24,313	0/0:53,0:53:99:0,102,1542	1/1:12,0:12:18.05:240,18,0	1/1:12,0:12:22.96:291,23,0	1/1:19,0:19:28.51:342,29,0	0/0:28,0:28:48.16:0,48,738	0/0:21,0:21:45.15:0,45,733	0/0:16,0:16:24.01:0,24,318	0/0:13,0:13:26.68:0,27,442
chr10	58646696	.	ATGAT	A	9126.91	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-6.310;DP=807;FS=1.831;HRun=0;HaplotypeScore=189.6141;InbreedingCoeff=0.9998;MQ=90.19;MQ0=0;MQRankSum=-6.889;QD=40.03;ReadPosRankSum=4.823;VQSLOD=5.3128;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,102,2634	0/0:14,0:14:42.14:0,42,1091	0/0:34,0:34:77.41:0,77,1669	0/0:29,0:29:69.24:0,69,1626	0/0:24,0:24:60.19:0,60,1455	1/1:2,30:32:81.28:1452,81,0	1/1:1,20:21:45.15:809,45,0	0/0:36,0:36:99:0,99,2461	0/0:27,0:27:75.26:0,75,1920	0/0:25,0:25:39.24:0,39,1039	0/0:18,0:18:48.10:0,48,818	1/1:4,34:38:84.29:1491,84,0	0/0:45,0:45:99:0,105,1948	0/0:42,0:42:99:0,109,1994	0/0:31,0:31:81.75:0,82,1477	1/1:4,37:41:93.32:1671,93,0	0/0:24,0:24:69.24:0,69,1781	1/1:1,18:19:42.14:755,42,0	0/0:21,0:21:59.30:0,59,930	0/0:26,0:26:67.08:0,67,1127	0/0:42,0:42:97.66:0,98,1696	1/1:3,22:26:51.17:906,51,0	1/1:2,18:20:41.74:753,42,0	1/1:1,30:31:72.11:1291,72,0	0/0:24,0:24:69.23:0,69,1211	0/0:31,0:31:78.18:0,78,1375	0/0:37,0:36:90.78:0,91,1680	0/0:12,0:12:27.02:0,27,494
chr10	58647449	.	TG	T	11860.53	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=22.893;DP=802;FS=0.000;HRun=2;HaplotypeScore=152.8990;InbreedingCoeff=1.0000;MQ=77.70;MQ0=0;MQRankSum=-5.156;QD=34.99;ReadPosRankSum=2.705;VQSLOD=4.3673;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,123,1795	0/0:16,0:16:48.15:0,48,697	0/0:22,0:22:59.34:0,59,857	0/0:28,0:28:74:0,74,1008	0/0:27,0:27:78.23:0,78,1124	0/0:22,0:22:66.21:0,66,967	0/0:23,0:23:69.22:0,69,1013	0/0:26,0:26:78.26:0,78,1151	0/0:36,0:36:99:0,108,1575	1/1:1,28:29:84.27:1088,84,0	1/1:0,20:20:60.11:753,60,0	0/0:36,0:36:99:0,105,1533	1/1:1,31:32:87.28:1128,87,0	1/1:3,25:28:75.24:973,75,0	1/1:3,42:45:99:1596,123,0	0/0:47,0:47:99:0,138,2066	0/0:33,0:33:99:0,99,1482	0/0:17,0:17:48.16:0,48,715	1/1:3,16:19:48.16:621,48,0	1/1:1,30:31:87.01:1117,87,0	1/1:2,27:29:69.09:852,69,0	0/0:29,0:29:84.26:0,84,1218	0/0:23,0:23:63.18:0,63,902	0/0:35,0:35:99:0,105,1554	1/1:5,22:27:69.15:862,69,0	1/1:2,24:26:69.22:890,69,0	1/1:0,38:38:99:1437,111,0	1/1:1,14:15:42.14:544,42,0
chr10	58647626	.	TC	T	10709.07	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=15.963;DP=768;FS=7.667;HRun=3;HaplotypeScore=77.1240;InbreedingCoeff=0.9997;MQ=75.40;MQ0=0;MQRankSum=-3.011;QD=32.95;ReadPosRankSum=3.110;VQSLOD=5.3289;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,135,1902	0/0:16,0:16:48.14:0,48,657	0/0:31,0:31:74.90:0,75,1010	0/0:26,0:26:75.11:0,75,975	0/0:30,0:30:84.26:0,84,1187	0/0:24,0:24:72.24:0,72,1037	0/0:21,0:21:63.21:0,63,906	0/0:27,0:27:78.24:0,78,1091	0/0:34,0:34:99:0,102,1454	1/1:1,27:28:78.21:940,78,0	1/1:0,21:21:51.12:615,51,0	0/0:29,0:29:87.28:0,87,1223	1/1:0,40:40:99:1375,111,0	1/1:2,24:26:60.19:743,60,0	1/1:1,30:31:87.27:1078,87,0	0/0:35,0:35:99:0,105,1474	0/0:33,0:33:93.31:0,93,1335	0/0:23,0:23:66.20:0,66,926	1/1:1,17:18:51.14:608,51,0	1/1:0,28:28:66.14:795,66,0	1/1:0,34:34:96.30:1190,96,0	0/0:20,0:20:60.18:0,60,827	0/0:22,0:22:63.20:0,63,888	0/0:25,0:25:75.25:0,75,1080	1/1:0,25:25:69.22:855,69,0	1/1:2,24:26:66.21:818,66,0	1/1:0,40:40:99:1394,114,0	1/1:0,8:8:24.08:298,24,0
chr10	58648889	.	G	GT	15302.76	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-17.116;DP=773;FS=0.265;HRun=1;HaplotypeScore=74.1477;InbreedingCoeff=0.9977;MQ=76.94;MQ0=0;MQRankSum=-3.801;QD=44.88;ReadPosRankSum=3.095;VQSLOD=4.4198;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,144,1969	0/0:10,0:10:30.07:0,30,399	0/0:20,0:20:57.05:0,57,762	0/0:13,0:13:36.03:0,36,446	0/0:23,0:23:66.21:0,66,902	0/0:22,0:22:66.22:0,66,923	0/0:24,0:24:72.24:0,72,1003	0/0:21,0:21:54.17:0,54,739	0/0:30,0:30:90.30:0,90,1258	1/1:0,38:38:99:1752,111,0	1/1:0,17:17:42.14:671,42,0	0/0:37,0:37:99:0,111,1532	1/1:1,32:33:93.32:1473,93,0	1/1:2,28:30:78.27:1232,78,0	1/1:0,30:30:90.31:1438,90,0	0/0:34,0:34:99:0,102,1389	0/0:41,0:41:99:0,120,1668	0/0:18,0:18:51.17:0,51,712	1/1:1,14:15:45.15:708,45,0	1/1:0,24:24:69.24:1099,69,0	1/1:0,71:71:99:3116,196,0	0/0:21,0:21:57.13:0,57,797	0/0:20,0:20:54.17:0,54,737	0/0:49,0:48:99:0,141,1913	1/1:1,21:22:63.21:998,63,0	1/1:1,25:27:78.27:1233,78,0	1/1:0,29:29:84.29:1342,84,0	1/1:0,5:5:15.05:240,15,0
chr10	58649552	.	C	CT	7583.57	PASS	AB=0.559;AC=35;AF=0.625;AN=56;BaseQRankSum=-10.263;DP=580;FS=7.471;HRun=9;HaplotypeScore=68.2681;InbreedingCoeff=0.9079;MQ=72.82;MQ0=0;MQRankSum=-0.230;QD=19.96;ReadPosRankSum=-2.274;VQSLOD=4.3764;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:2,24:26:39.91:407,40,0	1/1:2,7:9:15.03:159,15,0	0/0:18,0:17:24.59:0,25,251	0/0:17,0:13:8.18:0,8,91	1/1:18,7:26:48.77:414,49,0	0/0:20,1:21:28.80:0,29,367	0/0:22,0:22:20.91:0,21,409	1/1:8,20:28:36.83:637,37,0	1/1:4,5:9:12.03:133,12,0	1/1:4,17:21:52.02:566,52,0	0/1:4,14:19:12.33:295,0,12	0/0:24,0:24:67.18:0,67,563	1/1:5,9:14:30.03:317,30,0	1/1:3,20:23:54.15:597,54,0	1/1:7,26:33:54.15:598,54,0	0/0:21,1:22:26.80:0,27,462	1/1:3,25:28:60.16:664,60,0	0/0:22,0:22:59.98:0,60,521	1/1:6,11:18:16.89:282,17,0	1/1:3,17:20:36.90:365,37,0	1/1:1,14:15:27.07:299,27,0	0/0:19,0:19:36.06:0,36,281	0/0:16,0:16:38.59:0,39,322	0/0:19,0:19:47.98:0,48,417	1/1:3,19:23:26.91:280,27,0	1/1:5,18:23:50.14:486,50,0	1/1:7,17:25:60.11:642,60,0	1/1:3,16:20:41.95:446,42,0
chr10	58650838	.	AC	A	13610.40	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=16.315;DP=880;FS=5.294;HRun=2;HaplotypeScore=85.3824;InbreedingCoeff=0.9988;MQ=92.09;MQ0=0;MQRankSum=-4.208;QD=36.49;ReadPosRankSum=5.130;VQSLOD=5.2538;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:81.27:0,81,1214	0/0:18,1:19:18.23:0,18,770	0/0:31,0:31:89.33:0,89,1260	0/0:42,0:42:99:0,120,1693	0/0:41,0:41:99:0,120,1755	0/0:29,0:29:84.27:0,84,1237	0/0:27,0:27:81.27:0,81,1213	0/0:45,0:45:99:0,135,2004	0/0:30,0:30:87.28:0,87,1266	1/1:0,36:36:99:1372,108,0	1/1:0,17:17:51.17:662,51,0	0/0:38,0:38:99:0,114,1684	1/1:0,43:43:99:1597,123,0	1/1:0,41:41:99:1402,108,0	1/1:1,41:42:99:1480,114,0	0/0:42,0:42:99:0,120,1781	0/0:26,0:26:78.26:0,78,1169	0/0:24,0:24:69.19:0,69,999	1/1:1,11:12:33.11:429,33,0	1/1:0,29:29:78.25:1012,78,0	1/1:0,30:30:81.26:1052,81,0	0/0:31,0:31:93.30:0,93,1366	0/0:26,0:26:75.23:0,75,1079	0/0:28,0:28:84.26:0,84,1219	1/1:0,27:27:75.24:974,75,0	1/1:1,45:46:99:1721,135,0	1/1:0,39:39:99:1480,114,0	1/1:0,11:11:33.11:428,33,0
chr10	58652424	.	CT	C	13745.97	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-5.609;DP=662;FS=38.077;HRun=10;HaplotypeScore=69.0389;InbreedingCoeff=0.8099;MQ=75.98;MQ0=0;MQRankSum=-5.647;QD=21.61;ReadPosRankSum=3.607;VQSLOD=3.2395;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,35:38:99:865,101,0	1/1:1,2:3:6:52,6,0	0/0:9,0:10:14.05:0,14,172	0/0:15,0:16:35.52:0,36,338	1/1:7,33:40:98.96:859,99,0	1/1:2,22:24:56.97:495,57,0	1/1:2,20:22:56.98:495,57,0	1/1:5,27:32:74.97:651,75,0	1/1:1,22:23:62.99:547,63,0	1/1:4,20:25:61.98:516,62,0	1/1:3,17:21:50.01:423,50,0	1/1:2,21:23:53.99:469,54,0	1/1:2,31:33:59.79:748,60,0	1/1:3,28:31:77.98:676,78,0	1/1:4,26:30:74.97:651,75,0	1/1:3,29:31:86.98:755,87,0	1/1:1,38:40:99:970,113,0	1/1:3,14:17:41.98:365,42,0	1/1:5,12:19:9.87:291,10,0	1/1:1,18:19:47.97:417,48,0	1/1:2,18:20:53.99:469,54,0	1/1:3,17:20:47.98:417,48,0	1/1:2,13:15:35.99:313,36,0	1/1:1,23:24:59.99:521,60,0	1/1:2,15:17:35.99:313,36,0	1/1:1,18:19:53.98:466,54,0	1/1:5,28:33:0.11:613,0,0	1/1:2,14:16:44.98:390,45,0
chr10	58652724	.	C	CAT	7229.35	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-5.125;DP=447;FS=4.197;HRun=0;HaplotypeScore=85.8485;InbreedingCoeff=0.9252;MQ=69.45;MQ0=1;MQRankSum=-0.747;QD=36.88;ReadPosRankSum=0.235;VQSLOD=6.9409;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:63.20:0,63,800	0/0:6,0:6:15.04:0,15,178	0/0:10,0:9:2.37:0,2,25	0/0:9,0:6:6:0,6,59	0/0:24,0:24:60.19:0,60,763	0/0:24,0:24:60.18:0,60,750	0/0:10,0:10:24.08:0,24,305	0/0:40,0:40:78.23:0,78,969	0/0:8,0:8:18.06:0,18,229	1/1:17,6:23:57.18:859,57,0	1/1:12,6:18:48.16:768,48,0	0/0:16,0:16:21.04:0,21,241	1/1:18,6:24:15.99:777,16,0	1/1:9,4:13:24.08:392,24,0	1/1:6,3:10:24.08:375,24,0	0/0:11,0:11:24.08:0,24,304	0/0:22,0:22:51.16:0,51,649	0/0:16,0:16:36.10:0,36,445	1/1:16,3:18:3.94:597,4,0	1/1:10,5:15:36.11:570,36,0	1/1:10,4:14:32.83:469,33,0	0/0:10,0:10:24.08:0,24,304	0/0:7,0:7:18.04:0,18,216	0/0:9,0:9:12.02:0,12,138	1/1:13,0:13:27.09:449,27,0	1/1:14,4:18:39.13:650,39,0	1/1:10,2:12:39.13:629,39,0	1/1:12,4:16:42.14:694,42,0
chr10	58652746	.	CAT	C	9283.05	PASS	AB=0.889;AC=53;AF=0.946;AN=56;BaseQRankSum=-3.412;DP=390;FS=1.982;HRun=0;HaplotypeScore=78.9582;InbreedingCoeff=0.4349;MQ=65.54;MQ0=2;MQRankSum=-0.377;QD=24.62;ReadPosRankSum=2.659;VQSLOD=5.7672;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,16:22:36.04:430,36,0	1/1:0,5:5:12.04:156,12,0	0/0:13,0:3:3.01:0,3,40	0/1:14,0:7:3.11:3,0,20	1/1:4,19:23:39.12:500,39,0	1/1:2,21:23:51.17:663,51,0	1/1:1,6:7:18.06:234,18,0	1/1:10,20:30:60.14:743,60,0	1/1:1,6:7:12.04:156,12,0	1/1:14,3:17:39.09:464,39,0	1/1:13,4:17:29.93:349,30,0	1/1:2,5:7:6.02:78,6,0	1/1:12,5:17:45.06:557,45,0	1/1:8,0:8:9.03:116,9,0	1/1:7,1:8:17.99:211,18,0	1/1:0,5:5:12.04:156,12,0	1/1:4,17:21:45.15:585,45,0	1/1:2,20:22:39.13:501,39,0	1/1:15,7:21:51.16:641,51,0	1/1:11,1:12:21.05:258,21,0	1/1:5,3:8:6.15:180,6,0	1/1:0,5:5:12.04:156,12,0	1/1:1,7:8:11.94:156,12,0	1/1:2,1:3:3.01:39,3,0	1/1:10,4:14:39.11:490,39,0	1/1:15,2:16:39.12:492,39,0	1/1:14,2:16:39.06:472,39,0	1/1:15,2:17:39.13:498,39,0
chr10	58654381	.	TGG	T	10694.97	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-6.136;DP=630;FS=28.154;HRun=12;HaplotypeScore=110.9647;InbreedingCoeff=0.9951;MQ=75.46;MQ0=4;MQRankSum=-3.851;QD=18.19;ReadPosRankSum=6.094;VQSLOD=1.7054;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,21:30:56.32:591,56,0	1/1:1,0:16:27.91:120,28,0	0/0:21,0:21:34.06:0,34,301	0/0:20,0:18:32.40:0,32,293	1/1:8,25:36:51:623,51,0	1/1:5,20:25:57.05:580,57,0	1/1:4,17:21:33.03:336,33,0	1/1:6,0:25:47.51:204,48,0	1/1:2,20:23:56.86:561,57,0	1/1:5,17:22:36.25:415,36,0	1/1:4,10:14:24.04:244,24,0	1/1:7,19:26:47.77:488,48,0	1/1:4,17:22:50.41:499,50,0	1/1:3,15:18:39.06:396,39,0	1/1:4,28:33:71.89:785,72,0	1/1:2,0:26:57.61:249,58,0	1/1:0,1:26:63.39:292,63,0	1/1:0,0:19:40.20:177,40,0	1/1:5,7:12:21.03:213,21,0	1/1:6,23:30:59.80:591,60,0	1/1:7,15:22:42.07:427,42,0	1/1:4,14:20:44.57:420,45,0	1/1:8,14:22:33.04:336,33,0	1/1:5,15:20:42.05:427,42,0	1/1:4,11:15:26.79:256,27,0	1/1:1,21:22:60.13:610,60,0	1/1:4,22:24:48.10:488,48,0	1/1:1,15:16:36.08:366,36,0
chr10	58656926	.	T	TGTCACCTCACCA	78759.03	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-7.609;DP=717;FS=8.705;HRun=0;HaplotypeScore=207.5898;InbreedingCoeff=0.9979;MQ=72.24;MQ0=0;MQRankSum=-16.080;QD=134.86;ReadPosRankSum=3.401;VQSLOD=4.2047;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,102,3542	1/1:7,5:12:36.12:1895,36,0	0/0:32,0:32:93.32:0,93,2956	0/0:17,0:16:42.14:0,42,1302	0/0:30,0:30:87.28:0,87,2994	1/1:8,0:18:39.13:1967,39,0	1/1:7,0:21:48.16:2431,48,0	1/1:18,2:30:87.26:3657,87,0	0/0:20,0:20:60.19:0,60,2224	1/1:14,18:39:99:5906,114,0	1/1:10,19:33:72.25:4405,72,0	1/1:9,0:37:99:5182,99,0	1/1:10,10:23:54.19:3033,54,0	1/1:10,16:33:75.26:4515,75,0	1/1:12,18:34:81.28:4744,81,0	1/1:7,0:21:53.77:2845,54,0	1/1:8,11:22:54.19:3212,54,0	1/1:6,0:17:39.13:1892,39,0	1/1:11,11:24:66.20:3211,66,0	1/1:4,24:30:75.26:4551,75,0	1/1:7,5:13:18.06:992,18,0	1/1:7,0:24:48.16:2628,48,0	1/1:14,0:28:54.17:2847,54,0	1/1:9,0:25:45.11:2063,45,0	1/1:9,20:30:78.20:4526,78,0	1/1:7,17:28:84.27:4625,84,0	1/1:12,14:32:96.33:5758,96,0	1/1:0,10:10:30.10:1873,30,0
chr10	58657741	.	TGTTTC	T	6187.59	PASS	AB=0.949;AC=38;AF=0.704;AN=54;BaseQRankSum=3.129;DP=690;FS=3.011;HRun=0;HaplotypeScore=234.7310;InbreedingCoeff=0.3903;MQ=73.36;MQ0=2;MQRankSum=-2.706;QD=12.76;ReadPosRankSum=8.163;VQSLOD=3.5806;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:64.75:0,65,842	1/1:9,0:9:3.03:96,3,0	0/0:33,0:22:56.40:0,56,862	0/0:58,0:42:12.02:0,12,881	0/0:33,0:32:53.64:0,54,861	0/1:20,0:20:82.31:315,0,82	1/1:15,4:19:16.16:422,16,0	1/1:33,0:33:14.99:242,15,0	0/0:26,0:26:53.17:0,53,895	1/1:27,0:27:9.90:183,10,0	0/1:14,0:14:7.99:47,0,8	0/1:37,3:40:38.11:456,0,38	1/1:23,0:23:11.97:140,12,0	1/1:34,0:34:24.07:279,24,0	1/1:33,0:33:27.08:314,27,0	1/1:3,12:15:21.07:402,21,0	./.	1/1:7,14:21:14.97:239,15,0	1/1:20,0:19:27.71:209,28,0	1/1:25,0:25:21.03:230,21,0	1/1:13,0:13:3.76:100,4,0	0/1:26,5:30:67.66:762,0,68	0/1:15,1:16:17.74:464,0,18	0/1:24,1:25:10.13:585,0,10	1/1:14,0:14:7.23:189,7,0	1/1:27,0:27:33.40:270,33,0	1/1:18,0:18:15.04:174,15,0	1/1:8,0:8:6.02:70,6,0
chr10	58657751	.	CGTTTCGTTTCATTTTGTTTTGTTTT	C	14125.02	PASS	AB=1.000;AC=32;AF=0.571;AN=56;BaseQRankSum=3.346;DP=720;FS=3.129;HRun=0;HaplotypeScore=431.8383;InbreedingCoeff=0.7985;MQ=72.39;MQ0=7;MQRankSum=-0.646;QD=37.87;ReadPosRankSum=2.258;VQSLOD=1.7581;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:90.77:0,91,2660	1/1:0,8:9:11.92:602,12,0	0/0:45,0:25:68.65:0,69,1600	0/0:81,0:48:69.86:0,70,2084	0/0:30,0:29:72.58:0,73,2770	0/0:20,0:20:43.22:0,43,3710	0/1:20,0:20:6.52:7,0,2211	1/1:3,31:34:93.11:1424,93,0	0/0:26,0:26:70.12:0,70,3080	1/1:2,25:27:51.10:1124,51,0	1/1:2,12:14:20.75:379,21,0	0/0:30,0:30:31.61:0,32,5103	1/1:0,24:24:11.74:808,12,0	1/1:0,31:31:24.08:1618,24,0	1/1:1,33:34:27.09:1821,27,0	0/0:13,0:13:21.07:0,21,1599	1/1:0,23:23:3.01:35,3,0	0/0:18,0:18:4.73:0,5,974	1/1:1,19:19:51:1006,51,0	1/1:1,23:24:36.07:1441,36,0	1/1:9,0:9:23.68:292,24,0	0/1:33,0:32:18.02:18,0,4098	0/0:17,0:17:21.27:0,21,2570	0/0:27,0:27:23.76:0,24,2947	1/1:13,0:13:33.08:666,33,0	1/1:2,27:29:71.84:1468,72,0	1/1:1,20:21:15.04:1011,15,0	1/1:3,5:8:6.02:405,6,0
chr10	58657757	.	GTTTCA	G	5844.46	PASS	AB=0.990;AC=33;AF=0.589;AN=56;BaseQRankSum=5.664;DP=732;FS=2.245;HRun=0;HaplotypeScore=244.5362;InbreedingCoeff=-0.2855;MQ=70.22;MQ0=7;MQRankSum=-4.259;QD=10.29;ReadPosRankSum=2.417;VQSLOD=4.0274;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:39,0:39:4.88:5,0,536	1/1:9,0:9:8.52:105,9,0	0/0:49,0:24:26.68:0,27,704	0/0:91,0:52:20.25:0,20,948	0/1:33,0:32:18.10:18,0,492	0/1:19,0:19:99:147,0,168	0/1:20,0:20:65.10:280,0,65	0/1:31,0:31:41.49:517,0,41	0/1:29,0:29:8.71:9,0,535	0/1:25,0:25:78.87:290,0,79	1/1:13,0:13:6.02:73,6,0	0/1:27,3:30:99:313,0,254	1/1:24,0:24:11.76:141,12,0	1/1:31,0:31:24.07:281,24,0	1/1:33,0:33:26.76:317,27,0	0/1:15,0:15:16.93:234,0,17	0/0:23,0:23:2.94:0,3,18	0/1:18,0:18:71.92:123,0,72	0/1:19,0:18:15.97:421,0,16	1/1:23,0:23:21.06:251,21,0	0/1:13,0:13:37.42:208,0,37	0/1:29,3:31:99:465,0,169	0/1:17,0:17:88.53:265,0,89	0/1:27,0:27:76.68:328,0,77	0/1:16,0:15:47.86:363,0,48	0/1:27,0:27:57.85:444,0,58	1/1:20,0:20:14.80:176,15,0	1/1:5,0:5:6.02:70,6,0
chr10	58657760	.	TC	T	104.12	PASS	AB=0.984;AC=16;AF=0.286;AN=56;BaseQRankSum=8.693;DP=734;FS=1.871;HRun=1;HaplotypeScore=229.9823;InbreedingCoeff=0.6999;MQ=70.80;MQ0=7;MQRankSum=-4.904;QD=0.42;ReadPosRankSum=5.782;VQSLOD=-0.7570;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:84.13:0,84,1131	1/1:9,0:9:6.62:21,7,0	0/0:47,1:23:22.70:0,23,754	0/1:89,3:52:30.63:31,0,1129	0/0:32,0:31:69.04:0,69,918	0/0:18,0:18:36.78:0,37,221	0/0:21,0:21:1.79:0,2,213	0/0:31,0:31:39.67:0,40,279	0/0:32,0:32:72.16:0,72,994	0/0:25,0:25:12.79:0,13,128	0/1:13,0:13:2.01:2,0,13	0/0:31,0:31:33.48:0,33,246	1/1:24,0:24:8.88:28,9,0	1/1:31,0:31:17.76:56,18,0	1/1:33,0:33:19.98:64,20,0	0/0:15,0:15:22.30:0,22,170	0/0:23,0:23:2.92:0,3,17	0/0:20,0:20:26.64:0,27,265	0/0:19,0:18:26.57:0,27,169	1/1:23,0:23:3.55:29,4,0	0/0:13,0:13:20.56:0,21,247	0/0:32,0:31:36.41:0,36,300	0/0:17,0:17:26.21:0,26,140	0/0:25,0:25:36.90:0,37,182	0/0:16,0:15:33.25:0,33,193	0/0:27,0:27:28.77:0,29,290	1/1:20,0:20:11.03:35,11,0	1/1:5,0:5:4.44:14,4,0
chr10	58657762	.	ATTTTGTTTTG	A	5981.43	PASS	AB=1.000;AC=24;AF=0.429;AN=56;BaseQRankSum=2.719;DP=736;FS=14.266;HRun=0;HaplotypeScore=295.3973;InbreedingCoeff=0.4809;MQ=68.34;MQ0=7;MQRankSum=-9.309;QD=17.14;ReadPosRankSum=5.027;VQSLOD=2.2685;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:16,23:39:7.45:1111,7,0	1/1:9,0:9:9.03:209,9,0	0/0:48,0:24:9.51:0,10,274	0/0:88,0:48:13.47:0,13,635	1/1:12,19:30:45.15:1000,45,0	0/0:19,0:19:51.01:0,51,1655	0/0:22,0:22:48.08:0,48,1269	0/0:31,0:31:23.09:0,23,285	1/1:13,21:34:33.11:907,33,0	0/1:25,0:25:99:118,0,226	0/1:13,0:13:28.53:63,0,29	0/0:30,0:30:69.13:0,69,2617	1/1:24,0:24:11.81:279,12,0	1/1:31,0:31:24.08:558,24,0	1/1:33,0:33:27.09:629,27,0	0/1:16,0:16:50.72:51,0,960	0/0:23,0:23:3.01:0,3,34	0/0:20,0:20:27.09:0,27,869	0/1:19,0:18:57.11:57,0,124	0/1:23,0:23:30.50:389,0,30	0/0:14,0:14:12:0,12,123	0/0:32,0:31:63.17:0,63,2040	0/0:16,0:16:33.03:0,33,1089	0/0:26,0:26:46.73:0,47,1359	0/0:16,0:15:18.05:0,18,211	0/1:27,0:27:99:122,0,222	1/1:20,0:20:15.05:349,15,0	1/1:5,0:5:6.02:140,6,0
chr10	58658687	.	CA	C	2483.72	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=5.158;DP=737;FS=3.339;HRun=4;HaplotypeScore=117.7322;InbreedingCoeff=0.9983;MQ=87.00;MQ0=0;MQRankSum=-1.822;QD=32.68;ReadPosRankSum=-2.304;VQSLOD=1.9871;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:90.26:0,90,1236	1/1:0,10:10:30.09:360,30,0	0/0:31,1:32:45.39:0,45,985	0/0:17,1:18:45.11:0,45,598	0/0:43,0:43:99:0,117,1620	0/0:27,0:27:78.26:0,78,1092	0/0:24,0:24:69.23:0,69,966	1/1:1,37:38:99:1295,111,0	0/0:27,0:27:81.27:0,81,1133	0/0:30,0:30:78.25:0,78,1057	0/0:19,0:19:54.18:0,54,755	0/0:33,0:33:93.27:0,93,1250	0/0:29,0:29:87.28:0,87,1201	0/0:38,0:38:99:0,105,1470	0/0:30,0:30:90.29:0,90,1244	0/0:22,0:22:66.22:0,66,924	1/1:0,28:28:81.25:972,81,0	0/0:20,0:20:60.14:0,60,798	0/0:26,0:26:75.25:0,75,1041	0/0:24,0:24:69.23:0,69,966	0/0:30,0:30:81.27:0,81,1132	0/0:33,0:33:96.31:0,96,1327	0/0:15,0:15:42.12:0,42,557	0/0:26,0:26:75.24:0,75,1027	0/0:23,0:23:66.22:0,66,924	0/0:28,0:28:78.24:0,78,1062	0/0:24,0:24:72.24:0,72,1008	0/0:7,0:7:21.06:0,21,278
chr10	58659512	.	TCTGAGTACAG	T	3164.12	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=5.938;DP=745;FS=0.640;HRun=0;HaplotypeScore=263.1031;InbreedingCoeff=0.9976;MQ=89.03;MQ0=0;MQRankSum=-9.420;QD=45.20;ReadPosRankSum=1.874;VQSLOD=3.1727;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,21:29:45.12:1433,45,0	0/0:7,0:7:21.07:0,21,1059	0/0:29,0:29:81.28:0,81,3746	0/0:28,0:27:65.32:0,65,3025	1/1:3,21:24:23.66:719,24,0	0/0:25,0:25:69.24:0,69,3461	0/0:29,0:29:84.29:0,84,4234	0/0:28,0:28:78.25:0,78,3576	1/1:2,14:16:36.12:1155,36,0	0/0:24,0:24:60.20:0,60,2798	0/0:30,0:30:87.30:0,87,4484	0/0:39,0:39:99:0,111,5514	0/0:23,0:23:60.21:0,60,2916	0/0:30,0:30:81.25:0,81,3683	0/0:22,0:22:63.22:0,63,3233	0/0:28,0:28:78.27:0,78,4002	0/0:33,0:33:87.30:0,87,4387	0/0:12,0:12:33.11:0,33,1729	0/0:30,0:30:84.29:0,84,4106	0/0:14,0:14:42.14:0,42,2170	0/0:60,0:60:99:0,175,8269	0/0:31,0:31:84.29:0,84,4327	0/0:25,0:25:66.23:0,66,3436	0/0:32,0:32:84.29:0,84,4329	0/0:24,0:24:69.24:0,69,3438	0/0:20,0:20:60.21:0,60,2949	0/0:35,0:34:99:0,102,5162	0/0:17,0:17:51.18:0,51,2672
chr10	58664578	.	GAA	G	3988.75	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=7.515;DP=549;FS=10.251;HRun=13;HaplotypeScore=76.0640;InbreedingCoeff=0.9513;MQ=70.57;MQ0=4;MQRankSum=0.492;QD=20.25;ReadPosRankSum=5.610;VQSLOD=2.1971;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,23:32:74.31:675,74,0	0/0:3,0:3:6.01:0,6,69	0/0:38,0:18:30.47:0,30,296	0/0:28,0:12:8.48:0,8,139	1/1:8,12:22:38.38:382,38,0	1/1:2,18:21:56.04:513,56,0	1/1:5,17:22:24.11:414,24,0	0/0:16,0:15:42.12:0,42,562	0/0:16,0:16:38.69:0,39,492	0/0:14,0:16:23.75:0,24,314	0/0:11,0:11:24.08:0,24,347	1/1:2,16:20:41.73:440,42,0	0/0:26,0:28:60.04:0,60,918	0/0:24,0:25:45.13:0,45,610	0/0:27,0:27:63.20:0,63,892	1/1:5,13:18:45.06:436,45,0	0/0:28,0:34:87.71:0,88,1089	1/1:3,6:10:14.74:128,15,0	0/0:16,0:16:43.93:0,44,568	0/0:18,0:19:48.13:0,48,637	0/0:10,0:12:26.57:0,27,340	1/1:3,15:20:44.49:401,44,0	1/1:4,8:13:28.80:251,29,0	1/1:3,14:17:36.03:348,36,0	0/0:14,1:17:5.99:0,6,379	0/0:13,1:17:15.55:0,16,495	0/0:13,0:14:38.62:0,39,523	0/0:10,0:10:15.03:0,15,197
chr10	58664661	.	G	GC	679.47	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.510;DP=604;FS=0.771;HRun=7;HaplotypeScore=67.2790;InbreedingCoeff=0.9894;MQ=72.13;MQ0=0;MQRankSum=-1.066;QD=29.54;ReadPosRankSum=-0.425;VQSLOD=3.9406;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,120,1158	0/0:7,0:7:21.03:0,21,203	0/0:23,0:23:21.27:0,21,365	0/0:25,0:24:50.98:0,51,466	0/0:21,0:21:57.09:0,57,550	0/0:20,0:20:54.06:0,54,514	0/0:24,0:24:66.07:0,66,629	0/0:15,0:15:36.04:0,36,343	0/0:15,0:15:42.07:0,42,405	0/0:22,0:22:60.09:0,60,579	0/0:9,0:9:24.03:0,24,231	0/0:28,0:28:74.48:0,74,702	0/0:28,0:28:84.11:0,84,799	0/0:21,0:21:57.05:0,57,541	0/0:16,0:16:42.05:0,42,400	1/1:3,20:23:66.18:774,66,0	0/0:29,0:29:78.09:0,78,745	0/0:19,0:19:54.09:0,54,521	0/0:15,0:15:30.05:0,30,290	0/0:22,0:22:63.10:0,63,608	0/0:37,0:37:99:0,102,978	0/0:20,0:20:57.09:0,57,550	0/0:18,0:18:54.07:0,54,515	0/0:16,0:16:42.04:0,42,398	0/0:22,0:22:66.08:0,66,629	0/0:21,0:22:59.11:0,59,551	0/0:21,0:21:63.09:0,63,602	0/0:17,0:17:48.07:0,48,463
chr10	58667344	.	GAA	G	4930.06	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=7.811;DP=336;FS=14.943;HRun=10;HaplotypeScore=45.4304;InbreedingCoeff=0.9401;MQ=76.96;MQ0=0;MQRankSum=-0.540;QD=28.83;ReadPosRankSum=1.634;VQSLOD=3.2056;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,8:10:21.05:234,21,0	1/1:1,2:3:6.01:67,6,0	0/0:14,0:14:12.61:0,13,260	0/0:10,0:8:14.60:0,15,145	1/1:0,10:10:30.08:334,30,0	1/1:0,12:12:36.10:401,36,0	1/1:2,10:12:21.05:234,21,0	1/1:4,31:35:87.17:950,87,0	0/0:10,0:10:27.09:0,27,429	0/0:7,0:7:21.06:0,21,293	0/0:7,0:7:21.07:0,21,320	1/1:0,6:6:15.04:167,15,0	0/0:11,0:12:32.60:0,33,485	0/0:6,0:6:18.05:0,18,261	0/0:10,0:10:30.09:0,30,452	1/1:0,11:11:33.09:368,33,0	1/1:3,26:29:72.18:803,72,0	1/1:1,25:26:72.19:803,72,0	0/0:12,0:14:29.58:0,30,418	0/0:10,0:10:27.04:0,27,380	0/0:9,0:9:27.09:0,27,425	1/1:0,4:4:12.03:134,12,0	1/1:0,6:6:18.05:200,18,0	1/1:0,7:7:21.06:234,21,0	0/0:14,0:15:38.62:0,39,577	0/0:13,0:13:36.12:0,36,569	0/0:10,1:12:2.16:0,2,451	0/0:11,0:13:32.07:0,32,423
chr10	58667566	.	C	CTGCA	12616.02	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-12.609;DP=619;FS=0.712;HRun=0;HaplotypeScore=103.1081;InbreedingCoeff=0.9835;MQ=88.37;MQ0=0;MQRankSum=-4.069;QD=55.82;ReadPosRankSum=4.444;VQSLOD=5.8824;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,45:54:99:2910,108,0	0/0:4,0:4:9.03:0,9,171	0/0:21,0:21:59.48:0,59,991	0/0:28,0:27:60.04:0,60,896	1/1:1,11:12:18.06:484,18,0	1/1:1,21:22:51.18:1375,51,0	1/1:5,18:25:39.13:1052,39,0	0/0:29,0:29:72.24:0,72,1309	0/0:25,0:25:72.25:0,72,1359	0/0:22,0:22:63.21:0,63,1164	0/0:9,0:9:24.08:0,24,456	1/1:4,25:29:60.21:1618,60,0	0/0:31,0:31:84.27:0,84,1546	0/0:25,0:25:75.26:0,75,1423	0/0:19,0:19:57.20:0,57,1066	1/1:2,12:14:39.13:1050,39,0	0/0:15,0:15:45.14:0,45,822	1/1:2,25:29:66.23:1780,66,0	0/0:33,0:33:96.31:0,96,1760	0/0:8,0:8:21.06:0,21,366	0/0:48,0:48:99:0,141,2639	1/1:2,6:8:12.04:323,12,0	1/1:1,9:10:18.06:485,18,0	1/1:1,21:23:57.20:1538,57,0	0/0:16,0:16:45.12:0,45,800	0/0:19,0:19:54.14:0,54,976	0/0:25,0:25:72.21:0,72,1288	0/0:16,0:16:48.11:0,48,841
chr10	58668268	.	T	TAAC	40998.57	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-10.201;DP=813;FS=4.982;HRun=0;HaplotypeScore=97.7457;InbreedingCoeff=0.9995;MQ=88.30;MQ0=0;MQRankSum=-12.072;QD=54.81;ReadPosRankSum=6.445;VQSLOD=7.1096;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,37:40:96.33:2110,96,0	1/1:0,10:11:30.10:669,30,0	0/0:33,0:33:85.49:0,85,1301	0/0:32,0:32:68.42:0,68,1170	1/1:9,22:31:72.25:1541,72,0	1/1:2,19:21:54.19:1201,54,0	1/1:3,31:35:93.26:2052,93,0	1/1:5,27:33:87.27:1850,87,0	1/1:0,23:23:60.21:1340,60,0	1/1:2,35:38:99:2387,111,0	1/1:4,13:17:36.12:796,36,0	1/1:4,31:37:87.30:1914,87,0	1/1:4,29:34:81.28:1807,81,0	1/1:5,22:28:63.22:1376,63,0	1/1:5,31:37:93.32:2057,93,0	1/1:6,35:41:99:2265,102,0	1/1:2,16:18:35.94:803,36,0	1/1:1,13:14:39.13:871,39,0	1/1:5,20:24:66.21:1366,66,0	1/1:4,18:22:57.20:1261,57,0	1/1:3,36:40:99:2187,99,0	1/1:5,21:28:69.24:1526,69,0	1/1:2,14:16:42.14:903,42,0	1/1:2,44:46:99:2504,114,0	1/1:1,23:24:69.24:1538,69,0	1/1:2,28:31:84.28:1817,84,0	1/1:5,34:39:93.32:2052,93,0	1/1:3,14:19:36.12:804,36,0
chr10	58668272	.	A	AACC	26309.20	PASS	AB=1.000;AC=50;AF=0.893;AN=56;BaseQRankSum=5.723;DP=766;FS=22.778;HRun=0;HaplotypeScore=142.9276;InbreedingCoeff=0.6706;MQ=88.77;MQ0=0;MQRankSum=-10.963;QD=37.42;ReadPosRankSum=11.188;VQSLOD=3.2730;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:37,0:37:76.37:1370,76,0	1/1:11,0:11:30.10:445,30,0	0/0:32,0:33:94.47:0,94,1556	0/0:30,0:30:77.29:0,77,1401	1/1:26,1:28:72.19:1062,72,0	1/1:19,0:19:32.20:784,32,0	1/1:34,0:34:93.22:1370,93,0	0/1:36,0:36:31.59:1089,0,32	1/1:25,0:25:21.24:806,21,0	1/1:37,0:37:99:1462,104,0	1/1:11,1:12:36.12:553,36,0	1/1:35,0:35:65.36:1265,65,0	1/1:32,0:32:81.15:1207,81,0	0/1:26,0:26:2.72:824,0,3	1/1:33,0:34:71.32:1340,71,0	1/1:36,0:37:58.37:1465,58,0	1/1:17,0:17:16.96:509,17,0	1/1:13,0:13:39.13:555,39,0	1/1:22,0:21:37.95:773,38,0	1/1:19,1:21:35.23:847,35,0	1/1:37,0:37:99:1448,99,0	1/1:26,1:27:55.24:1017,55,0	1/1:14,0:14:42.09:617,42,0	1/1:46,0:46:80.37:1556,80,0	1/1:24,0:24:47.25:991,47,0	1/1:29,0:29:35.27:1071,35,0	1/1:35,0:35:93.31:1351,93,0	1/1:15,0:15:36.12:532,36,0
chr10	58668582	.	CCACCACCACCAG	C	8519.59	PASS	AB=1.000;AC=51;AF=0.911;AN=56;BaseQRankSum=6.631;DP=505;FS=20.617;HRun=0;HaplotypeScore=148.1396;InbreedingCoeff=0.4985;MQ=81.44;MQ0=2;MQRankSum=-4.484;QD=18.20;ReadPosRankSum=-0.134;VQSLOD=2.6258;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:5,18:23:15.05:395,15,0	1/1:0,5:5:6.02:164,6,0	0/1:29,0:28:4.68:5,0,17	0/0:18,0:17:11.05:0,11,178	1/1:7,13:20:17.61:154,18,0	1/1:8,11:19:12.04:335,12,0	1/1:8,21:29:5.81:129,6,0	1/1:16,0:16:18.45:183,18,0	0/0:19,0:19:45.04:0,45,1786	1/1:5,2:7:6:129,6,0	1/1:4,4:8:6.02:143,6,0	1/1:7,11:18:30.10:674,30,0	1/1:3,18:21:17.74:501,18,0	1/1:7,16:23:12.04:272,12,0	1/1:5,21:26:33.11:771,33,0	1/1:20,0:20:42.10:1144,42,0	1/1:6,17:23:12.04:359,12,0	1/1:8,18:26:15.05:479,15,0	1/1:8,6:13:20.96:352,21,0	1/1:5,4:9:8.95:195,9,0	1/1:18,22:40:6.96:131,7,0	1/1:5,11:16:12.04:286,12,0	1/1:7,5:11:3.48:73,3,0	1/1:3,14:17:3.48:106,3,0	1/1:4,8:12:12.04:323,12,0	1/1:10,11:21:33.01:759,33,0	1/1:4,9:13:11.92:372,12,0	1/1:1,0:1:3.01:87,3,0
chr10	58668594	.	GCACCAC	G	1932.46	PASS	AB=1.000;AC=27;AF=0.482;AN=56;BaseQRankSum=9.252;DP=441;FS=21.904;HRun=0;HaplotypeScore=115.6444;InbreedingCoeff=-0.2525;MQ=61.78;MQ0=4;MQRankSum=-8.072;QD=6.00;ReadPosRankSum=6.315;VQSLOD=0.4266;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:22:6.85:54,0,7	1/1:5,0:5:3.48:40,3,0	0/0:15,0:13:11.69:0,12,188	0/0:16,0:13:23.11:0,23,338	0/0:16,0:16:2.53:0,3,45	0/1:16,0:16:31.89:81,0,32	1/1:23,0:22:2.84:8,3,0	0/0:15,0:15:11.65:0,12,97	0/0:18,0:18:54.14:0,54,1297	0/1:6,0:6:30:30,0,38	0/1:7,0:7:3.52:4,0,38	0/1:18,0:18:56.48:56,0,69	0/1:21,0:21:10.79:111,0,11	0/1:19,0:19:31.31:31,0,38	0/1:22,0:22:2.90:67,0,3	1/1:10,10:20:48.13:833,48,0	0/1:20,0:20:2.87:83,0,3	0/1:24,0:24:15.45:139,0,15	0/1:14,0:12:20.03:68,0,20	0/1:7,0:7:29.08:35,0,29	0/0:39,0:37:8.05:0,8,100	0/1:11,0:11:12.09:12,0,19	1/1:9,0:8:2.69:8,3,0	0/1:18,0:17:27.11:27,0,57	0/1:9,0:9:12.74:49,0,13	0/1:18,0:18:25.63:214,0,26	0/1:12,0:12:33.51:102,0,34	1/1:0,0:1:3.01:39,3,0
chr10	58668606	.	GCACCAC	G	1366.20	PASS	AB=0.976;AC=24;AF=0.429;AN=56;BaseQRankSum=10.950;DP=446;FS=26.714;HRun=0;HaplotypeScore=116.8917;InbreedingCoeff=-0.2896;MQ=51.17;MQ0=9;MQRankSum=-9.733;QD=4.71;ReadPosRankSum=9.450;VQSLOD=-0.3365;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:20:10.46:57,10,0	1/1:5,0:5:3.48:37,3,0	0/0:15,0:11:14.18:0,14,253	0/0:17,0:11:11.71:0,12,185	0/0:15,0:15:0.53:0,1,69	0/1:16,0:16:58.13:58,0,206	0/0:27,0:26:14.51:0,15,209	0/0:16,0:16:22.74:0,23,383	0/0:17,0:17:33.11:0,33,1056	0/1:3,0:2:30.34:30,0,38	0/0:8,0:8:2.63:0,3,186	0/1:20,0:20:38.40:38,0,398	0/1:20,0:20:83.04:97,0,83	0/1:21,0:21:18.44:18,0,193	0/1:22,0:22:30.21:52,0,30	0/1:6,9:16:16.77:487,0,17	0/1:21,0:21:65.53:66,0,110	0/1:24,0:24:99:115,0,269	0/1:16,0:12:54.42:54,0,230	0/1:7,0:7:30.32:30,0,134	0/0:41,0:38:16.15:0,16,379	0/1:13,0:13:7.90:8,0,39	1/1:7,0:6:2.29:5,2,0	0/1:18,0:17:19.91:20,0,237	1/1:8,0:8:8.46:52,8,0	0/1:16,0:16:99:185,0,249	0/1:14,0:14:84.21:84,0,259	0/1:3,0:2:34.68:35,0,41
chr10	58669179	.	C	CAT	7920.35	PASS	AB=0.529;AC=51;AF=0.911;AN=56;BaseQRankSum=0.291;DP=508;FS=8.902;HRun=0;HaplotypeScore=79.8664;InbreedingCoeff=0.7737;MQ=61.71;MQ0=11;MQRankSum=-2.587;QD=17.29;ReadPosRankSum=2.605;VQSLOD=4.2148;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:24:53.38:403,53,0	1/1:5,0:5:11.96:94,12,0	0/0:27,0:15:35.03:0,35,366	0/0:23,0:14:22.36:0,22,280	1/1:21,0:21:41.71:327,42,0	1/1:22,0:22:38.18:311,38,0	1/1:20,0:20:35.53:270,36,0	1/1:32,0:30:70.08:522,70,0	1/1:13,0:11:20.87:159,21,0	1/1:25,0:25:62.40:552,62,0	1/1:9,0:9:17.90:139,18,0	1/1:9,1:9:23.92:204,24,0	1/1:22,0:22:59.82:504,60,0	1/1:17,0:16:32.72:250,33,0	1/1:15,0:15:26.97:224,27,0	1/1:9,0:9:23.61:193,24,0	0/1:1,8:9:9.80:32,0,10	1/1:14,0:14:30.06:301,30,0	1/1:23,0:22:56.60:473,57,0	1/1:15,0:14:29.94:244,30,0	1/1:34,0:34:80.70:629,81,0	1/1:9,0:9:20.78:164,21,0	1/1:19,0:18:32.69:257,33,0	1/1:25,0:23:41.75:327,42,0	1/1:26,0:25:65.82:534,66,0	1/1:24,0:24:53.86:451,54,0	1/1:9,0:9:26.96:221,27,0	1/1:7,0:7:17.92:139,18,0
chr10	58669180	.	ATCTCTC	A	285.77	PASS	AB=0.955;AC=14;AF=0.318;AN=44;BaseQRankSum=3.836;DP=508;FS=2.532;HRun=0;HaplotypeScore=128.3687;InbreedingCoeff=0.3316;MQ=61.35;MQ0=11;MQRankSum=-1.048;QD=2.29;ReadPosRankSum=0.702;VQSLOD=2.6668;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:5.68:0,6,41	./.	./.	./.	0/1:18,0:20:0:0,0,0	1/1:19,1:20:9.04:125,9,0	1/1:15,4:19:2.79:38,3,0	0/0:32,0:30:0.47:0,0,1	1/1:13,0:11:2.53:13,3,0	0/0:23,0:23:21.86:0,22,230	0/0:9,0:9:2.99:0,3,24	0/1:9,1:9:15.73:37,0,16	0/0:22,0:22:6.02:0,6,104	0/0:18,0:17:9:0,9,107	0/0:15,0:15:6.02:0,6,103	1/1:8,0:9:2.94:41,3,0	0/1:10,0:10:15.18:21,0,15	1/1:15,0:15:6.02:137,6,0	0/0:25,0:24:5.99:0,6,49	0/0:15,0:14:6:0,6,73	0/0:34,0:34:14.97:0,15,202	0/1:9,0:9:0.99:1,0,20	./.	./.	0/0:25,0:24:2.99:0,3,24	0/0:26,0:26:18.41:0,18,199	0/0:9,0:9:2.99:0,3,24	./.
chr10	58669312	.	A	ATCTC	17432.33	PASS	AC=26;AF=0.813;AN=32;BaseQRankSum=-6.565;DP=395;FS=0.000;HRun=0;HaplotypeScore=144.6512;InbreedingCoeff=0.9066;MQ=95.52;MQ0=2;MQRankSum=-9.370;QD=58.50;ReadPosRankSum=3.963;VQSLOD=6.4160;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,25:32:63.22:1631,63,0	1/1:2,9:11:27.09:709,27,0	0/0:33,0:28:74.80:0,75,1218	0/0:46,0:36:1.34:0,1,711	1/1:2,26:28:66.23:1751,66,0	1/1:1,15:16:42.14:1071,42,0	1/1:0,13:14:39.13:1000,39,0	1/1:17,25:44:99:2846,117,0	0/0:18,0:18:45.15:0,45,840	./.	./.	1/1:6,20:26:48.16:1253,48,0	./.	./.	./.	1/1:0,18:18:51.18:1335,51,0	1/1:3,11:14:30.14:727,30,0	1/1:3,21:24:50.67:1434,51,0	./.	./.	./.	1/1:2,23:25:63.22:1650,63,0	1/1:6,17:24:54.19:1411,54,0	1/1:4,16:20:24.08:615,24,0	./.	./.	./.	./.
chr10	58669756	.	TCCTG	T	6026.54	PASS	AB=0.817;AC=26;AF=0.464;AN=56;BaseQRankSum=-7.523;DP=572;FS=3.825;HRun=0;HaplotypeScore=106.6898;InbreedingCoeff=0.6898;MQ=71.42;MQ0=4;MQRankSum=1.626;QD=19.07;ReadPosRankSum=2.493;VQSLOD=4.1999;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:12,13:25:27.09:441,27,0	1/1:1,10:11:20.99:311,21,0	0/0:15,0:12:3.01:0,3,73	0/0:24,0:20:23.91:0,24,351	1/1:6,7:13:5.81:70,6,0	0/1:9,7:16:3.68:273,0,4	1/1:9,30:39:54.18:880,54,0	1/1:16,4:20:12.04:193,12,0	0/0:23,0:23:54.14:0,54,1079	0/0:8,0:11:14.41:0,14,193	0/0:4,0:10:16.83:0,17,228	1/1:9,13:22:27.09:428,27,0	0/0:9,0:23:26.66:0,27,419	0/0:7,0:22:23.96:0,24,408	0/0:10,0:24:30.07:0,30,485	0/1:4,12:16:36.85:502,0,37	1/1:10,14:24:16.27:563,16,0	1/1:8,22:30:51.17:832,51,0	0/1:15,0:19:2.11:2,0,103	0/0:8,0:10:8.96:0,9,120	0/0:22,0:43:51.12:0,51,743	1/1:9,10:18:23.99:378,24,0	1/1:4,6:10:9.03:147,9,0	1/1:6,26:32:60.20:979,60,0	0/0:8,0:14:18.05:0,18,289	0/1:9,0:20:26.87:27,0,175	0/0:10,0:21:15.05:0,15,263	0/0:4,0:13:14.99:0,15,199
chr10	58671247	.	G	GT	2923.76	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-10.709;DP=765;FS=2.602;HRun=4;HaplotypeScore=70.9454;InbreedingCoeff=0.9961;MQ=89.76;MQ0=0;MQRankSum=-5.157;QD=32.49;ReadPosRankSum=2.923;VQSLOD=4.4286;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,44:49:99:1764,129,0	0/0:12,0:12:33.09:0,33,374	0/0:27,0:27:72.17:0,72,808	0/0:32,0:31:52.02:0,52,750	1/1:3,17:20:45.15:615,45,0	0/0:23,0:23:66.17:0,66,739	0/0:34,0:34:99:0,102,1137	0/0:39,0:39:99:0,99,1115	0/0:26,0:26:72.20:0,72,816	0/0:38,0:38:99:0,114,1284	0/0:15,0:15:45.10:0,45,490	0/0:33,0:33:96.27:0,96,1088	0/0:27,0:27:81.23:0,81,919	0/0:28,0:28:81.23:0,81,918	0/0:48,0:48:99:0,135,1531	0/0:31,0:31:90.24:0,90,1011	0/0:36,0:36:93.23:0,93,1041	1/1:3,18:21:23.13:687,23,0	0/0:21,0:21:57.16:0,57,646	0/0:23,0:23:69.20:0,69,783	0/0:30,0:30:90.26:0,90,1020	0/0:16,0:16:39.11:0,39,442	0/0:21,0:21:60.14:0,60,661	0/0:34,0:34:62.91:0,63,1002	0/0:22,0:22:60.17:0,60,680	0/0:29,0:29:78.21:0,78,876	0/0:22,0:22:60.17:0,60,680	0/0:8,0:8:18.05:0,18,204
chr10	58671752	.	CT	C	1264.99	PASS	AB=0.876;AC=8;AF=0.143;AN=56;BaseQRankSum=8.589;DP=626;FS=5.348;HRun=10;HaplotypeScore=61.9674;InbreedingCoeff=0.7517;MQ=72.35;MQ0=0;MQRankSum=1.482;QD=11.29;ReadPosRankSum=-2.407;VQSLOD=2.4852;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,114,1261	1/1:0,8:8:20.99:182,21,0	0/0:14,0:15:28.79:0,29,290	0/1:11,2:12:36.30:36,0,142	0/0:26,0:26:69.16:0,69,745	0/0:21,0:21:63.16:0,63,689	0/0:20,1:21:31.10:0,31,571	1/1:11,26:37:71.61:621,72,0	0/0:14,0:14:12.21:0,12,331	0/0:26,0:26:66.18:0,66,730	0/0:12,0:12:33.05:0,33,352	0/0:31,0:31:87.23:0,87,955	0/0:19,0:19:45.12:0,45,497	0/0:19,0:19:51.14:0,51,564	0/0:29,0:30:80.98:0,81,847	0/0:23,1:24:46.10:0,46,724	1/1:0,23:23:65.99:573,66,0	0/1:27,4:31:0.01:0,0,662	0/0:17,0:17:42.11:0,42,458	0/0:22,0:22:54.15:0,54,596	0/0:7,0:7:21.06:0,21,232	0/0:25,0:25:60.16:0,60,664	0/0:17,1:18:19.07:0,19,438	0/0:27,0:27:66.18:0,66,729	0/0:22,0:24:59.89:0,60,613	0/0:27,0:27:66.17:0,66,723	0/0:31,1:31:58.21:0,58,857	0/0:16,0:16:13.06:0,13,372
chr10	58673245	.	ACCC	A	6759.51	PASS	AB=0.632;AC=27;AF=0.482;AN=56;BaseQRankSum=-7.019;DP=558;FS=31.588;HRun=10;HaplotypeScore=169.4744;InbreedingCoeff=0.9125;MQ=54.86;MQ0=4;MQRankSum=-5.162;QD=24.58;ReadPosRankSum=0.794;VQSLOD=0.8929;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,32:36:65.39:897,65,0	1/1:1,3:4:9.03:123,9,0	0/0:14,0:12:14.22:0,14,262	0/0:21,0:18:7.86:0,8,664	1/1:1,14:14:18.06:245,18,0	1/1:1,9:10:24.08:327,24,0	1/1:4,17:21:39.12:532,39,0	1/1:4,28:32:81.20:1048,81,0	0/0:24,0:25:61.24:0,61,863	0/0:6,0:21:15.73:0,16,235	0/1:5,0:12:3.52:4,0,143	1/1:2,22:24:48.15:655,48,0	0/0:4,0:22:42.54:0,43,398	0/0:3,0:25:36.46:0,36,386	0/0:3,0:30:71.41:0,71,548	1/1:2,24:26:51.14:678,51,0	1/1:4,13:17:33.10:450,33,0	1/1:3,24:27:63.12:819,63,0	0/0:7,0:15:11.57:0,12,170	0/0:5,0:15:34.65:0,35,253	0/0:27,0:29:59.74:0,60,941	1/1:1,11:12:30.10:409,30,0	1/1:0,8:9:9.01:122,9,0	1/1:8,22:30:33.20:450,33,0	0/0:5,0:18:35.76:0,36,267	0/0:4,0:18:34.96:0,35,288	0/0:3,0:17:38.38:0,38,299	0/0:4,0:7:17.91:0,18,134
chr10	58675793	.	TGACA	T	2270.29	PASS	AB=0.992;AC=26;AF=0.464;AN=56;BaseQRankSum=0.873;DP=563;FS=18.183;HRun=0;HaplotypeScore=126.1565;InbreedingCoeff=-0.0872;MQ=83.77;MQ0=22;MQRankSum=-3.204;QD=7.54;ReadPosRankSum=3.195;VQSLOD=1.2417;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:50.76:0,51,456	1/1:4,0:4:2.96:19,3,0	0/0:69,0:30:62.70:0,63,1652	0/0:88,0:31:44.58:0,45,1348	0/0:18,0:18:32.57:0,33,276	0/1:16,0:16:60.55:61,0,167	0/1:21,0:21:81:171,0,81	1/1:23,0:23:37.98:346,38,0	0/0:15,0:15:34.08:0,34,723	0/1:10,0:10:32.98:135,0,33	0/1:7,1:8:10.34:10,0,41	0/1:20,0:20:99:134,0,138	0/1:16,0:16:99:116,0,146	0/1:19,0:19:62.99:75,0,63	1/1:15,0:15:2.90:16,3,0	0/1:17,0:17:86.57:180,0,87	0/1:13,0:13:8.10:8,0,89	0/0:12,0:12:17.30:0,17,352	1/1:13,0:12:8.91:215,9,0	1/1:13,0:13:30.42:246,30,0	0/0:5,12:17:2.98:0,3,22	0/0:14,1:15:8.99:0,9,75	0/1:19,0:19:90.94:140,0,91	0/1:20,0:19:45.08:45,0,125	1/1:7,0:7:11.98:101,12,0	0/1:22,0:22:99:249,0,115	0/1:19,0:18:99:119,0,130	0/1:6,0:6:48.93:61,0,49
chr10	58675794	.	GACACAC	G	3165.79	PASS	AB=0.988;AC=30;AF=0.536;AN=56;BaseQRankSum=-2.346;DP=564;FS=30.556;HRun=0;HaplotypeScore=135.9797;InbreedingCoeff=0.0080;MQ=82.82;MQ0=26;MQRankSum=-3.755;QD=9.99;ReadPosRankSum=-0.287;VQSLOD=1.3206;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:47.64:0,48,492	1/1:3,2:4:3.01:70,3,0	0/0:68,0:29:68.58:0,69,1821	0/0:88,0:31:46.57:0,47,1396	0/0:19,0:18:32.16:0,32,331	0/1:16,0:16:60.45:60,0,343	0/1:21,0:21:99:151,0,153	1/1:1,22:23:63.08:1237,63,0	0/0:17,0:17:31.01:0,31,772	0/1:10,0:10:91.24:138,0,91	1/1:3,0:7:3.90:20,4,0	0/1:19,0:20:99:134,0,290	0/1:16,0:16:73.46:73,0,179	0/1:19,0:19:34.36:34,0,86	1/1:15,0:15:2.88:15,3,0	0/1:17,0:17:99:182,0,198	1/1:2,8:11:3.41:57,3,0	0/0:11,0:11:24:0,24,402	1/1:12,0:11:29.88:243,30,0	1/1:13,0:13:30.43:246,30,0	1/1:17,0:17:0.47:1,0,0	0/0:5,0:15:6.01:0,6,73	0/1:21,0:21:99:152,0,186	0/1:19,0:19:37.77:38,0,273	1/1:8,0:7:10.54:80,11,0	0/1:22,0:22:99:250,0,186	0/1:18,0:18:98.92:99,0,189	0/1:5,0:5:34.03:60,0,34
chr10	58675797	.	A	ACTCTCTCT	2572.94	PASS	AB=1.000;AC=34;AF=0.607;AN=56;BaseQRankSum=2.342;DP=557;FS=9.727;HRun=0;HaplotypeScore=154.9427;InbreedingCoeff=0.2403;MQ=82.11;MQ0=30;MQRankSum=-3.064;QD=8.44;ReadPosRankSum=0.208;VQSLOD=1.4375;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:27:45.15:0,45,720	1/1:5,0:4:3.01:44,3,0	0/0:68,0:29:60.77:0,61,1475	0/0:87,0:30:57.68:0,58,1286	0/0:18,0:17:27.01:0,27,371	0/1:17,0:17:12.44:205,0,12	0/1:20,0:20:20.16:138,0,20	1/1:22,0:22:13.76:253,14,0	0/0:17,0:16:25.77:0,26,744	0/1:10,0:10:0.66:180,0,1	0/1:6,0:6:0.02:1,0,0	0/1:19,0:19:87.77:147,0,88	1/1:12,0:12:12.27:177,12,0	0/0:8,0:19:3.06:0,3,7	0/0:1,12:15:2.04:0,2,6	1/1:19,0:19:4.11:185,4,0	1/1:11,0:11:6.91:79,7,0	0/1:11,0:11:90.01:90,0,277	1/1:13,0:11:8.37:110,8,0	1/1:14,0:14:5.50:118,6,0	1/1:19,0:17:3:25,3,0	1/1:13,0:13:3.01:45,3,0	1/1:20,0:20:18.14:205,18,0	0/1:23,0:21:12.55:204,0,13	1/1:8,0:7:1.12:21,1,0	1/1:21,0:20:8.74:301,9,0	0/1:16,0:17:29.75:194,0,30	1/1:4,0:4:0.73:20,1,0
chr10	58675799	.	A	ACTCTCTC	531.78	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=5.813;DP=563;FS=35.247;HRun=0;HaplotypeScore=157.0150;InbreedingCoeff=-0.2715;MQ=78.48;MQ0=35;MQRankSum=-2.146;QD=1.91;ReadPosRankSum=1.633;VQSLOD=1.4323;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,1:28:44.94:0,45,427	1/1:5,0:4:2.97:20,3,0	0/0:65,0:26:52.62:0,53,1199	0/0:86,0:29:57.33:0,57,983	0/0:13,0:18:3.53:0,4,180	0/1:20,0:19:44.69:45,0,107	0/1:19,0:19:14.98:15,0,214	0/1:22,0:22:43.76:44,0,336	0/0:16,0:15:26.68:0,27,604	0/1:12,0:12:88.49:88,0,146	0/0:7,0:7:3.01:0,3,33	0/1:20,0:20:24.75:25,0,312	0/1:12,0:12:61.10:61,0,161	0/0:17,0:17:11.86:0,12,110	0/0:12,0:12:3.01:0,3,38	0/1:19,0:19:44.54:45,0,256	0/1:11,0:11:22.35:30,0,22	0/1:11,0:11:72.18:72,0,177	0/0:16,0:14:13.21:0,13,275	0/1:14,0:14:17.84:18,0,195	0/1:18,0:16:0:0,0,0	1/1:14,0:13:2.92:17,3,0	0/1:20,0:20:35.93:36,0,194	0/1:23,0:21:63.32:63,0,137	0/0:8,0:7:9.90:0,10,85	0/1:19,0:18:73.20:73,0,271	0/1:18,0:17:33.43:33,0,287	0/0:8,0:8:16.37:0,16,122
chr10	58675834	.	C	CTGTGTGTGTG	1657.82	PASS	AB=0.980;AC=17;AF=0.327;AN=52;BaseQRankSum=-1.160;DP=479;FS=19.014;HRun=0;HaplotypeScore=159.7845;InbreedingCoeff=0.0535;MQ=39.99;MQ0=30;MQRankSum=-2.934;QD=8.59;ReadPosRankSum=-1.975;VQSLOD=1.3334;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:34:27.14:0,27,310	0/0:7,0:6:3.95:0,4,49	0/0:13,0:4:8.97:0,9,177	0/1:22,0:2:6.94:7,0,48	./.	0/0:28,0:26:39.72:0,40,921	0/0:17,0:17:16.56:0,17,361	0/0:27,0:26:72.62:0,73,754	0/0:18,0:17:21.43:0,21,319	0/1:17,0:17:99:221,0,269	./.	0/0:25,0:25:47.90:0,48,1018	0/1:14,0:14:99:148,0,125	0/1:18,0:15:16.95:82,0,17	1/1:15,0:12:2.99:24,3,0	0/0:24,0:23:46:0,46,905	0/0:9,0:9:18.51:0,19,215	0/1:12,0:11:76.10:76,0,186	0/1:16,0:13:99:331,0,116	1/1:8,0:7:3.01:84,3,0	1/1:10,0:8:5.21:31,5,0	0/0:13,0:12:9.02:0,9,158	0/0:20,0:20:24.06:0,24,467	0/0:28,0:25:34.02:0,34,625	1/1:12,0:11:4.07:12,4,0	0/1:14,3:16:99:258,0,233	0/1:19,0:17:40.37:264,0,40	0/1:12,0:10:66.57:277,0,67
chr10	58675836	.	C	CTGTGTGTGTGTGTG	2958.17	PASS	AC=22;AF=0.440;AN=50;BaseQRankSum=-3.467;DP=490;FS=3.648;HRun=0;HaplotypeScore=188.5782;InbreedingCoeff=0.6587;MQ=39.96;MQ0=30;MQRankSum=-5.575;QD=16.71;ReadPosRankSum=-1.943;VQSLOD=2.4354;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:36:21.43:0,21,297	0/0:6,0:5:3.01:0,3,54	0/0:9,0:3:0.51:0,1,134	0/0:18,0:4:6.02:0,6,104	./.	0/0:26,0:26:22.26:0,22,770	0/0:17,0:18:9.70:0,10,286	0/0:28,0:27:0.91:0,1,303	0/0:18,0:17:1.10:0,1,216	1/1:21,0:21:21.07:755,21,0	./.	0/0:22,0:25:27.32:0,27,860	1/1:16,0:17:17.37:371,17,0	1/1:17,0:15:3.01:116,3,0	1/1:17,0:14:3.01:47,3,0	0/0:23,0:22:30.94:0,31,905	0/0:11,0:9:8.47:0,8,109	1/1:15,0:15:4.57:103,5,0	1/1:11,2:13:15.52:485,16,0	1/1:5,0:8:3.01:84,3,0	1/1:13,0:12:5.69:60,6,0	0/0:13,0:12:6.02:0,6,162	0/0:19,0:19:9.03:0,9,289	0/0:25,0:23:12.50:0,13,407	./.	1/1:21,0:19:13.29:480,13,0	1/1:17,0:15:12.02:338,12,0	1/1:10,0:9:8.91:294,9,0
chr10	58676130	.	CAA	C	762.09	PASS	AB=0.600;AC=7;AF=0.125;AN=56;BaseQRankSum=1.164;DP=518;FS=1.467;HRun=4;HaplotypeScore=92.1547;InbreedingCoeff=0.8207;MQ=68.54;MQ0=16;MQRankSum=0.137;QD=10.73;ReadPosRankSum=1.119;VQSLOD=0.0175;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:28:65.42:506,65,0	0/0:6,0:6:17.79:0,18,195	0/0:23,0:18:48.05:0,48,475	0/0:36,0:26:67.17:0,67,703	0/1:4,8:11:30.34:57,0,30	0/0:15,0:15:29.41:0,29,221	0/0:23,0:23:51.36:0,51,393	0/0:21,0:21:57.01:0,57,519	0/0:14,0:14:39.04:0,39,422	0/0:16,0:16:43.43:0,43,356	0/0:13,0:12:29.10:0,29,230	0/0:12,0:11:29.76:0,30,230	0/0:17,0:17:28.83:0,29,195	0/0:19,0:19:40.09:0,40,296	0/0:30,0:29:55.02:0,55,344	1/1:5,9:14:12.52:145,13,0	0/0:22,0:20:41.72:0,42,307	1/1:16,0:11:21.44:200,21,0	0/0:20,0:20:48.08:0,48,427	0/0:14,0:14:35.85:0,36,285	0/0:21,0:21:47.90:0,48,371	0/0:18,0:18:36.03:0,36,286	0/0:11,0:10:27.87:0,28,239	0/0:25,0:23:50.10:0,50,384	0/0:11,0:10:26.07:0,26,235	0/0:28,0:27:76.84:0,77,629	0/0:21,0:21:55.82:0,56,422	0/0:10,0:10:20.04:0,20,165
chr10	58676133	.	AACACAC	A	2447.76	PASS	AB=0.958;AC=33;AF=0.611;AN=54;BaseQRankSum=2.417;DP=521;FS=0.815;HRun=0;HaplotypeScore=117.9986;InbreedingCoeff=0.0180;MQ=62.38;MQ0=19;MQRankSum=-3.734;QD=6.06;ReadPosRankSum=0.509;VQSLOD=2.3080;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:28:33.07:33,0,59	0/1:8,0:8:38.39:38,0,289	0/0:20,0:15:0:0,0,0	./.	0/1:12,0:12:46.81:47,0,85	0/1:14,0:14:24.79:25,0,43	0/1:25,0:23:38.40:38,0,153	0/0:21,0:21:6.02:0,6,122	0/0:15,0:15:27.04:0,27,541	1/1:10,5:15:15.03:251,15,0	1/1:10,3:12:3.48:60,3,0	0/1:12,0:11:24.90:46,0,25	1/1:8,9:17:12.04:242,12,0	1/1:14,4:19:10.80:160,11,0	1/1:14,13:30:16.14:565,16,0	0/1:14,0:14:45.80:46,0,54	0/1:18,0:20:9.97:115,0,10	0/1:18,0:13:29.15:29,0,102	1/1:21,0:22:14.94:176,15,0	1/1:9,3:12:6.02:118,6,0	1/1:24,0:24:9.39:99,9,0	0/0:17,0:17:15.66:0,16,140	0/0:11,0:10:6:0,6,72	0/1:23,0:22:3.65:4,0,101	1/1:10,0:10:5.81:74,6,0	0/1:22,7:28:8.01:102,0,8	1/1:14,5:20:15.05:284,15,0	1/1:6,4:10:3.48:61,3,0
chr10	58676178	.	ACACC	A	1139.43	PASS	AB=0.992;AC=18;AF=0.321;AN=56;BaseQRankSum=9.170;DP=539;FS=39.689;HRun=0;HaplotypeScore=115.0157;InbreedingCoeff=0.3970;MQ=65.22;MQ0=13;MQRankSum=-5.198;QD=4.91;ReadPosRankSum=1.792;VQSLOD=0.2533;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:32:59.17:0,59,648	0/0:9,0:9:14.35:0,14,310	0/0:20,0:14:41.95:0,42,372	0/0:36,0:22:12.14:0,12,524	0/0:18,0:18:8.51:0,9,229	1/1:3,12:14:3.01:53,3,0	1/1:6,14:18:9.02:158,9,0	0/0:18,0:17:44.81:0,45,390	0/0:16,0:16:39.05:0,39,497	0/0:19,0:19:28.80:0,29,311	0/0:6,0:6:3.65:0,4,73	1/1:2,16:17:5.74:100,6,0	0/0:17,0:17:1.44:0,1,178	0/1:20,0:20:21.23:21,0,246	0/1:35,0:35:10.37:10,0,372	0/1:17,0:17:21.09:21,0,280	0/1:27,0:27:33.82:34,0,373	0/0:12,0:12:25.18:0,25,209	0/0:14,0:14:25.75:0,26,249	0/1:9,0:9:0.97:1,0,65	0/0:31,0:31:46.92:0,47,526	1/1:6,15:21:9.54:179,10,0	1/1:16,0:16:26.30:204,26,0	1/1:22,5:26:50.35:513,50,0	0/1:6,0:6:19.73:20,0,42	0/0:24,0:23:38.37:0,38,364	0/0:17,0:18:6.89:0,7,225	0/0:16,0:15:21.30:0,21,223
chr10	58677284	.	TA	T	11236.09	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-1.955;DP=584;FS=6.272;HRun=8;HaplotypeScore=65.8216;InbreedingCoeff=0.9730;MQ=82.46;MQ0=4;MQRankSum=-2.034;QD=22.38;ReadPosRankSum=5.037;VQSLOD=5.2062;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,27:31:78.12:752,78,0	1/1:2,8:10:21.03:203,21,0	0/0:34,0:27:34.38:0,34,340	0/0:29,0:18:15.96:0,16,191	1/1:3,22:25:63.01:596,63,0	1/1:0,22:22:60.10:579,60,0	1/1:3,13:16:36.05:347,36,0	1/1:7,21:28:63.01:572,63,0	0/0:19,0:19:57.16:0,57,673	1/1:3,26:29:75.07:707,75,0	1/1:1,14:15:42.07:404,42,0	1/1:3,17:20:41.95:405,42,0	1/1:4,17:21:51.08:492,51,0	1/1:3,17:20:36.05:347,36,0	1/1:1,18:19:42.07:405,42,0	1/1:1,14:15:39.06:376,39,0	1/1:2,16:18:36.06:347,36,0	1/1:3,21:24:48.07:463,48,0	1/1:7,14:21:42.05:397,42,0	1/1:1,13:14:35.98:330,36,0	1/1:1,4:5:9.01:87,9,0	1/1:5,15:20:33:309,33,0	1/1:2,16:18:45.02:425,45,0	1/1:1,21:22:51.08:492,51,0	1/1:0,24:24:60.10:579,60,0	1/1:1,18:19:54.09:521,54,0	1/1:1,31:32:81.13:781,81,0	1/1:1,13:14:33.05:318,33,0
chr10	58678298	.	G	GTTGTTTGTTTGT	48568.56	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=1.058;DP=800;FS=1.292;HRun=0;HaplotypeScore=276.2460;InbreedingCoeff=0.9768;MQ=62.79;MQ0=0;MQRankSum=-8.525;QD=67.55;ReadPosRankSum=-0.889;VQSLOD=4.0872;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:33,0:45:61.91:2596,62,0	1/1:10,0:16:15.05:732,15,0	0/0:29,0:29:26.95:0,27,777	0/0:28,0:27:36.12:0,36,1047	1/1:31,0:39:57.19:2312,57,0	1/1:16,0:30:48.16:1295,48,0	1/1:13,0:25:30.41:1000,30,0	1/1:56,0:56:69.22:3097,69,0	0/0:24,0:24:50.90:0,51,1680	1/1:18,7:25:23.39:1759,23,0	1/1:14,14:29:48.16:2445,48,0	1/1:14,0:28:42.14:1128,42,0	1/1:13,10:26:27.09:1502,27,0	1/1:9,12:23:42.14:2418,42,0	1/1:19,16:38:63.21:3323,63,0	1/1:15,14:30:52.05:2753,52,0	1/1:14,0:22:24.08:1247,24,0	1/1:9,0:11:11.71:457,12,0	1/1:25,8:33:70.02:2736,70,0	1/1:14,14:29:60.20:2953,60,0	1/1:18,1:20:24.35:899,24,0	1/1:16,0:32:54.18:1357,54,0	1/1:14,0:25:45.11:1163,45,0	1/1:9,0:19:24.08:566,24,0	1/1:20,6:28:36.12:1839,36,0	1/1:12,14:30:66.21:3477,66,0	1/1:27,16:43:79.51:4279,80,0	1/1:7,7:14:19.33:1234,19,0
chr10	58679118	.	A	ATG	748.84	PASS	AB=1.000;AC=32;AF=0.696;AN=46;BaseQRankSum=0.898;DP=529;FS=11.484;HRun=0;HaplotypeScore=112.6747;InbreedingCoeff=0.0791;MQ=64.67;MQ0=23;MQRankSum=-0.177;QD=2.12;ReadPosRankSum=-1.331;VQSLOD=1.1243;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:27:2.63:3,0,75	0/0:11,0:10:1.95:0,2,29	./.	./.	0/0:17,0:16:8.95:0,9,68	1/1:18,0:17:6.10:42,6,0	1/1:22,0:20:6.37:38,6,0	./.	0/0:12,0:13:5.69:0,6,30	0/1:19,0:18:15.43:28,0,15	1/1:6,0:6:5.73:35,6,0	1/1:13,4:15:3.01:39,3,0	0/1:16,0:16:4.66:23,0,5	./.	1/1:22,0:22:11.96:93,12,0	0/1:17,0:17:17.47:35,0,17	0/1:21,0:20:3.35:3,0,13	1/1:19,0:18:18.43:156,18,0	1/1:17,0:16:5.81:34,6,0	1/1:14,0:14:0.08:19,0,0	./.	1/1:22,0:22:3:25,3,0	1/1:17,0:16:5.99:48,6,0	1/1:23,0:22:9:88,9,0	0/1:11,0:11:3.63:20,0,4	0/1:18,0:16:0.94:47,0,1	0/1:17,0:16:8.08:64,0,8	1/1:11,0:8:5.05:42,5,0
chr10	58679171	.	T	TGAGAGA	4372.53	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=4.583;DP=448;FS=63.422;HRun=0;HaplotypeScore=116.8034;InbreedingCoeff=-0.1605;MQ=45.78;MQ0=53;MQRankSum=2.112;QD=12.46;ReadPosRankSum=1.713;VQSLOD=1.5574;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:19,0:16:15.63:340,0,16	1/1:12,0:11:12.58:279,13,0	0/0:9,0:5:15.05:0,15,322	0/0:11,0:7:18.03:0,18,363	0/0:15,6:20:8.32:0,8,70	0/0:16,0:14:3.79:0,4,28	0/1:20,0:18:6.22:6,0,70	0/1:9,0:7:48.88:49,0,87	1/1:14,0:13:5.37:103,5,0	0/1:19,0:16:99:216,0,184	0/0:15,0:14:6.01:0,6,79	1/1:18,0:14:17.94:281,18,0	0/1:14,0:14:69.61:70,0,111	1/1:16,0:15:1.45:138,1,0	0/0:25,0:22:15:0,15,196	0/1:17,0:15:99:186,0,240	1/1:8,0:6:8.99:127,9,0	0/1:15,0:14:99:183,0,136	0/1:13,0:10:85.85:223,0,86	0/1:20,0:19:18.10:18,0,80	1/1:25,0:16:11.04:252,11,0	1/1:22,0:21:17.39:409,17,0	0/1:13,0:12:15.22:185,0,15	0/1:18,0:15:54.96:147,0,55	0/1:10,0:10:65.62:335,0,66	0/1:17,0:14:99:585,0,105	0/1:18,0:18:34.70:68,0,35	0/1:14,0:8:8.90:173,0,9
chr10	58679173	.	T	TGAGAGAGAGAGA	6123.74	PASS	AB=0.927;AC=45;AF=0.865;AN=52;BaseQRankSum=0.448;DP=467;FS=11.698;HRun=0;HaplotypeScore=146.0866;InbreedingCoeff=0.3573;MQ=45.60;MQ0=47;MQRankSum=3.977;QD=15.20;ReadPosRankSum=3.002;VQSLOD=3.3129;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:17:18.06:434,18,0	1/1:12,0:11:15.91:410,16,0	0/0:11,0:6:17.93:0,18,491	0/0:12,0:7:17.98:0,18,510	0/1:23,0:22:18.18:19,0,18	1/1:19,0:17:0.89:2,1,0	0/1:18,5:23:55.89:101,0,56	1/1:17,0:13:22.59:600,23,0	1/1:14,0:13:6.02:185,6,0	1/1:19,0:16:15.02:221,15,0	./.	1/1:18,0:14:17.89:483,18,0	1/1:14,0:14:5.57:70,6,0	0/1:16,0:15:4.79:97,0,5	./.	1/1:17,0:15:8.34:277,8,0	1/1:9,0:8:9.50:309,10,0	1/1:13,0:13:11.93:364,12,0	1/1:12,0:9:15.05:264,15,0	1/1:20,0:19:2.68:11,3,0	1/1:20,0:14:11.31:216,11,0	1/1:22,0:21:17.98:476,18,0	1/1:13,0:12:12.93:305,13,0	1/1:19,0:16:11.86:239,12,0	1/1:13,0:13:14.36:259,14,0	1/1:17,0:14:29.06:531,29,0	1/1:18,0:18:6.06:59,6,0	1/1:14,0:8:2.25:194,2,0
chr10	58679178	.	G	GAGAGAGAA	7381.79	PASS	AB=0.933;AC=34;AF=0.607;AN=56;BaseQRankSum=-1.043;DP=481;FS=39.682;HRun=0;HaplotypeScore=120.0973;InbreedingCoeff=0.0809;MQ=49.04;MQ0=40;MQRankSum=2.753;QD=19.22;ReadPosRankSum=1.146;VQSLOD=2.6134;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:20,0:18:3.28:349,0,3	0/1:12,0:11:4.12:271,0,4	0/0:12,0:6:17.80:0,18,413	0/0:16,0:8:14.22:0,14,435	0/0:25,0:24:13.46:0,13,98	0/0:17,0:15:5.59:0,6,47	0/1:22,0:20:34.61:50,0,35	0/1:24,0:20:99:165,0,132	0/1:14,0:14:8.96:95,0,9	1/1:13,0:23:28.96:782,29,0	0/1:5,9:14:0.21:60,0,0	1/1:18,0:14:7.10:258,7,0	1/1:7,0:17:6.68:131,7,0	1/1:6,0:13:5.50:251,6,0	0/0:10,13:24:7.83:0,8,57	0/1:16,0:14:70.81:196,0,71	0/1:10,0:10:10.94:152,0,11	0/1:12,0:12:52.30:191,0,52	1/1:6,0:15:21.85:773,22,0	1/1:9,0:18:0.34:159,0,0	1/1:12,0:8:11.28:454,11,0	1/1:21,0:20:18.06:412,18,0	0/1:10,0:10:48.25:198,0,48	0/1:16,0:13:0.57:141,0,1	1/1:15,0:15:5.09:683,5,0	1/1:6,0:17:21.10:1125,21,0	1/1:6,12:19:0.65:117,1,0	0/1:5,7:12:0.99:371,0,1
chr10	58680249	.	TCTCTCC	T	4547.62	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=10.298;DP=457;FS=3.396;HRun=0;HaplotypeScore=97.3534;InbreedingCoeff=0.9359;MQ=69.07;MQ0=10;MQRankSum=-10.421;QD=32.03;ReadPosRankSum=1.585;VQSLOD=4.4423;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:39.09:0,39,1119	0/0:8,0:8:12.04:0,12,337	0/0:35,0:20:8.80:0,9,97	0/0:49,0:28:29.86:0,30,500	0/0:19,0:19:39.12:0,39,1165	0/0:8,0:8:18.06:0,18,601	0/0:14,0:14:28.93:0,29,826	0/0:27,0:27:54.17:0,54,1488	0/0:16,0:16:39.13:0,39,1096	1/1:2,9:11:27.09:561,27,0	1/1:4,2:6:15.01:274,15,0	0/0:21,0:21:42.14:0,42,1319	1/1:6,11:17:33.11:704,33,0	1/1:7,10:17:24.08:513,24,0	1/1:5,11:16:24.08:512,24,0	0/0:15,0:15:36.11:0,36,1042	0/0:20,0:20:42.14:0,42,1370	0/0:9,0:8:15.05:0,15,472	1/1:5,5:9:15.05:299,15,0	1/1:2,6:8:12.04:248,12,0	1/1:7,8:14:8.96:146,9,0	0/0:17,0:17:36.12:0,36,1163	0/0:13,0:13:33.11:0,33,1065	0/0:22,0:21:63.20:0,63,1744	1/1:6,8:14:36.04:626,36,0	1/1:2,5:7:12.02:216,12,0	1/1:5,7:12:18.06:384,18,0	1/1:6,3:9:3.01:64,3,0
chr10	58680368	.	G	GGT	3472.42	PASS	AB=0.688;AC=23;AF=0.411;AN=56;BaseQRankSum=-8.682;DP=343;FS=3.173;HRun=0;HaplotypeScore=62.1717;InbreedingCoeff=0.7192;MQ=68.32;MQ0=3;MQRankSum=2.390;QD=28.23;ReadPosRankSum=-0.498;VQSLOD=4.6104;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:69.18:0,69,806	0/0:5,0:5:12.04:0,12,145	0/0:31,0:21:20.13:0,20,271	0/1:20,1:14:19.45:19,0,147	0/0:15,0:15:33.10:0,33,398	0/0:9,0:9:24.06:0,24,277	0/0:18,0:18:45.14:0,45,542	0/0:13,0:13:18.04:0,18,206	0/0:18,0:18:51.13:0,51,597	1/1:1,11:13:33.11:535,33,0	1/1:2,6:8:15.05:243,15,0	0/0:13,0:13:30.06:0,30,338	1/1:2,5:7:17.93:231,18,0	1/1:4,9:13:27.09:427,27,0	1/1:4,3:7:15.05:236,15,0	0/0:14,0:14:36.11:0,36,434	0/0:16,0:16:39.08:0,39,444	0/0:5,0:5:14.73:0,15,138	1/1:4,0:4:3.01:43,3,0	0/1:1,8:9:9.57:362,0,10	1/1:1,12:13:24.08:389,24,0	0/0:10,0:10:27.07:0,27,314	0/0:12,0:12:33.08:0,33,385	0/0:16,0:16:42.11:0,42,493	0/1:3,8:11:9.57:362,0,10	1/1:1,9:10:27.09:430,27,0	1/1:1,5:6:9.03:146,9,0	1/1:0,1:1:3.01:49,3,0
chr10	58681832	.	AG	A	3621.86	PASS	AB=0.544;AC=6;AF=0.107;AN=56;BaseQRankSum=12.926;DP=715;FS=10.505;HRun=1;HaplotypeScore=73.7131;InbreedingCoeff=0.6629;MQ=66.19;MQ0=0;MQRankSum=-3.292;QD=36.58;ReadPosRankSum=2.153;VQSLOD=3.6176;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,126,1938	0/1:1,3:4:38.94:75,0,39	0/0:22,0:22:66.22:0,66,1050	0/0:20,0:20:56.55:0,57,854	0/0:32,0:32:96.29:0,96,1487	0/0:24,0:24:72.23:0,72,1125	0/0:33,0:33:99:0,99,1509	1/1:0,23:23:69.22:949,69,0	0/0:24,0:24:72.23:0,72,1128	0/0:25,0:25:75.26:0,75,1200	0/0:9,0:9:27.09:0,27,429	0/0:23,0:23:69.24:0,69,1101	0/0:32,0:32:96.33:0,96,1535	0/0:37,0:37:99:0,108,1722	0/0:29,0:29:87.30:0,87,1389	0/1:2,29:31:6.81:1046,0,7	1/1:1,40:41:99:1553,111,0	0/0:17,0:17:45.13:0,45,694	0/0:21,0:21:63.14:0,63,936	0/0:26,0:26:75.26:0,75,1196	0/0:46,0:46:99:0,135,2158	0/0:20,0:20:60.20:0,60,959	0/0:22,0:22:66.23:0,66,1055	0/0:40,0:40:99:0,114,1790	0/0:14,0:14:42.14:0,42,672	0/0:23,0:23:69.24:0,69,1103	0/0:30,0:30:87.30:0,87,1391	0/0:5,0:5:15.05:0,15,240
chr10	58682458	.	AAG	A	958.33	PASS	AB=0.992;AC=42;AF=0.808;AN=52;BaseQRankSum=-0.270;DP=307;FS=5.207;HRun=0;HaplotypeScore=90.5741;InbreedingCoeff=0.4692;MQ=56.38;MQ0=17;MQRankSum=-1.545;QD=3.85;ReadPosRankSum=-1.129;VQSLOD=1.9918;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:21:25.23:132,25,0	1/1:3,0:2:2.63:34,3,0	0/1:31,1:11:14.18:14,0,198	0/0:38,0:23:31.87:0,32,393	1/1:14,0:13:15.41:63,15,0	1/1:10,0:10:4.77:24,5,0	1/1:13,0:12:11.51:63,12,0	1/1:5,3:7:9.03:113,9,0	0/0:8,0:8:24.02:0,24,300	1/1:8,0:8:10.90:30,11,0	1/1:3,0:3:5.45:14,5,0	0/1:4,0:4:0:0,0,0	1/1:14,0:13:17.50:49,18,0	1/1:18,0:18:17.44:56,17,0	1/1:12,0:11:19.59:58,20,0	0/1:8,0:9:35.77:36,0,52	1/1:15,1:15:19.26:196,19,0	1/1:6,0:6:5.32:28,5,0	1/1:8,0:7:10.43:43,10,0	1/1:5,0:5:5.45:15,5,0	1/1:11,0:7:11.12:30,11,0	0/1:7,0:7:0.02:0,0,0	./.	0/0:8,0:9:4.86:0,5,17	1/1:8,0:7:10.90:30,11,0	1/1:13,0:12:18.17:50,18,0	1/1:5,0:5:7.95:24,8,0	./.
chr10	58682466	.	GAGAGA	G	446.50	PASS	AB=0.933;AC=12;AF=0.222;AN=54;BaseQRankSum=0.086;DP=329;FS=10.362;HRun=0;HaplotypeScore=103.8070;InbreedingCoeff=0.2291;MQ=65.89;MQ0=16;MQRankSum=0.045;QD=4.21;ReadPosRankSum=-2.438;VQSLOD=0.6983;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:19,0:19:5.09:148,0,5	0/0:3,0:2:4.25:0,4,31	0/0:43,0:19:24.55:0,25,872	0/0:45,0:25:23.33:0,23,1001	1/1:12,0:11:17.32:98,17,0	0/1:8,4:12:19.85:42,0,20	1/1:7,7:13:4.76:125,5,0	0/0:10,0:9:18.01:0,18,207	0/0:8,0:8:24.08:0,24,712	0/0:8,0:8:17.84:0,18,147	0/0:3,0:3:8.63:0,9,45	1/1:1,3:4:0.83:15,1,0	0/1:13,0:13:4.70:5,0,144	0/0:17,0:17:35.56:0,36,249	0/0:11,0:10:28.64:0,29,146	0/1:9,0:10:45.97:46,0,133	0/0:15,0:14:27.08:0,27,380	0/1:5,0:5:16.15:22,0,16	0/0:10,0:9:18.04:0,18,213	0/0:6,0:6:8.57:0,9,43	0/0:13,0:9:20.39:0,20,133	0/0:7,1:8:8.91:0,9,30	0/0:2,1:3:0.89:0,1,2	0/0:5,1:6:7.42:0,7,59	0/0:8,0:8:17.20:0,17,87	0/1:16,0:16:90.65:91,0,236	0/0:5,0:5:2.43:0,2,103	./.
chr10	58682468	.	GAGA	G	1442.33	PASS	AB=0.980;AC=23;AF=0.426;AN=54;BaseQRankSum=-0.307;DP=331;FS=1.330;HRun=0;HaplotypeScore=95.4576;InbreedingCoeff=0.3560;MQ=67.40;MQ0=15;MQRankSum=-3.660;QD=8.85;ReadPosRankSum=1.450;VQSLOD=3.2001;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,17:19:41.63:687,42,0	0/0:3,0:2:3.26:0,3,10	0/0:46,0:21:26.28:0,26,626	0/0:45,0:25:34.23:0,34,751	1/1:0,11:10:17.97:303,18,0	0/1:12,0:12:3.15:3,0,81	0/1:14,0:13:41.97:64,0,42	0/0:11,0:10:12.12:0,12,90	0/0:8,0:8:24.08:0,24,522	0/0:8,0:8:2.33:0,2,13	1/1:3,0:3:3.74:10,4,0	0/0:6,0:6:7.57:0,8,34	1/1:12,0:12:14.98:87,15,0	0/1:17,0:17:10.82:50,0,11	1/1:11,0:10:13.39:35,13,0	0/1:10,2:11:43.60:44,0,131	0/0:14,0:13:23.35:0,23,155	1/1:0,4:4:6.02:112,6,0	0/0:10,0:9:11.27:0,11,50	1/1:6,0:6:4.36:11,4,0	0/1:13,0:9:5.87:6,0,22	0/0:8,0:8:19.12:0,19,90	0/0:3,0:3:2.80:0,3,13	0/0:6,0:6:11.27:0,11,70	1/1:8,0:8:8.97:22,9,0	0/1:16,0:16:11.45:158,0,11	0/1:5,0:5:9.81:30,0,10	./.
chr10	58682470	.	GA	G	4052.39	PASS	AB=0.908;AC=33;AF=0.611;AN=54;BaseQRankSum=-3.993;DP=333;FS=2.973;HRun=1;HaplotypeScore=81.8953;InbreedingCoeff=0.5177;MQ=68.59;MQ0=15;MQRankSum=-0.691;QD=20.89;ReadPosRankSum=4.053;VQSLOD=4.0570;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:19:28.91:406,29,0	1/1:3,0:2:1.82:6,2,0	0/0:47,0:21:16.81:0,17,411	0/0:48,0:26:21.61:0,22,446	1/1:11,0:10:18:196,18,0	0/0:12,0:12:14.57:0,15,121	0/1:14,0:13:18.74:19,0,61	0/1:10,0:9:12.42:12,0,44	0/0:9,0:9:21.70:0,22,319	1/1:0,8:8:18.06:247,18,0	1/1:0,3:3:9.03:123,9,0	0/0:6,0:6:8.38:0,8,41	1/1:0,12:12:36.12:482,36,0	1/1:1,16:17:33.37:526,33,0	1/1:1,10:10:30.10:411,30,0	0/1:12,0:11:21.87:22,0,98	0/1:14,0:13:21.14:21,0,55	1/1:4,0:4:5.96:45,6,0	1/1:2,7:8:15.02:186,15,0	1/1:0,5:5:9.03:123,9,0	0/1:2,11:9:6.99:226,0,7	0/0:8,0:8:20.02:0,20,111	0/0:3,0:3:2.87:0,3,15	0/0:6,0:6:11.49:0,11,59	1/1:0,8:8:18.06:247,18,0	1/1:0,16:16:45.14:586,45,0	1/1:1,4:5:14.53:167,15,0	./.
chr10	58682561	.	G	GGA	1132.10	PASS	AB=0.929;AC=32;AF=0.842;AN=38;BaseQRankSum=-0.814;DP=80;FS=2.422;HRun=0;HaplotypeScore=55.8939;InbreedingCoeff=-0.0137;MQ=33.51;MQ0=1;MQRankSum=2.014;QD=17.97;ReadPosRankSum=0.671;VQSLOD=3.1212;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,2:7:20.92:190,21,0	./.	./.	./.	./.	1/1:1,1:2:2.55:18,3,0	0/1:3,2:5:3.42:34,0,3	0/1:8,0:8:6.60:48,0,7	./.	1/1:4,0:4:11.85:79,12,0	1/1:1,0:1:3.01:35,3,0	0/1:5,0:4:0.24:68,0,0	./.	0/0:4,0:4:2.22:0,2,7	1/1:4,0:4:12.04:159,12,0	1/1:2,0:2:6.02:66,6,0	1/1:2,0:2:2.68:11,3,0	./.	1/1:1,0:1:2.96:19,3,0	1/1:2,0:2:5.96:44,6,0	0/1:4,0:4:2.42:38,0,2	./.	1/1:1,3:4:9.03:123,9,0	./.	1/1:2,0:2:5.99:51,6,0	1/1:3,0:3:9.03:136,9,0	1/1:4,0:4:5.89:59,6,0	1/1:3,0:3:3.01:43,3,0
chr10	58683777	.	G	GCTCTCTCTCT	9308.28	PASS	AB=0.801;AC=37;AF=0.661;AN=56;BaseQRankSum=-3.571;DP=816;FS=1.685;HRun=0;HaplotypeScore=237.4409;InbreedingCoeff=0.5262;MQ=50.26;MQ0=13;MQRankSum=-4.259;QD=16.39;ReadPosRankSum=-1.707;VQSLOD=3.8514;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:10,0:31:0:1,0,0	1/1:14,0:14:6.02:163,6,0	0/0:30,0:13:15.02:0,15,383	0/0:38,0:14:8.30:0,8,214	0/0:12,0:31:0.34:0,0,1	0/1:18,0:22:0:0,0,0	1/1:23,0:23:7.93:271,8,0	1/1:48,0:46:41.43:995,41,0	0/0:30,0:32:57.85:0,58,1619	1/1:14,0:25:48.13:1116,48,0	1/1:15,1:16:6.02:171,6,0	1/1:28,1:39:6.02:208,6,0	1/1:18,8:28:11.76:340,12,0	0/0:20,20:41:1.94:0,2,4	1/1:15,17:39:2.51:145,3,0	1/1:24,0:38:12.04:363,12,0	0/1:24,0:24:62.42:454,0,62	1/1:14,0:16:16.61:378,17,0	1/1:32,0:30:51.38:1557,51,0	1/1:17,7:26:2.41:18,2,0	1/1:19,15:34:0.94:1,1,0	0/0:15,0:22:0.45:0,0,1	0/0:7,0:15:0.03:0,0,0	1/1:16,9:26:0.40:0,0,0	0/0:20,11:35:1.46:0,1,9	1/1:13,1:27:62.53:1872,63,0	1/1:13,12:29:18.53:682,19,0	1/1:18,7:24:16.30:574,16,0
chr10	58683799	.	TCACACACACACACA	T	598.83	PASS	AB=0.853;AC=5;AF=0.089;AN=56;BaseQRankSum=1.346;DP=724;FS=4.847;HRun=0;HaplotypeScore=238.9004;InbreedingCoeff=0.1442;MQ=43.41;MQ0=22;MQRankSum=-2.384;QD=6.73;ReadPosRankSum=-2.532;VQSLOD=1.8491;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:8.68:0,9,354	1/1:3,3:10:2.93:105,3,0	0/0:28,0:8:10.59:0,11,452	0/0:37,0:8:5.97:0,6,53	0/0:29,0:28:22.09:0,22,1104	0/0:22,0:22:18.06:0,18,565	0/1:22,0:22:7.48:7,0,197	0/1:24,8:30:99:317,0,105	0/0:39,0:39:99:0,99,5418	0/0:21,0:21:44.97:0,45,1675	0/0:14,0:14:2.90:0,3,16	0/0:30,0:28:14.58:0,15,581	0/0:24,0:24:29.90:0,30,1786	0/0:43,0:44:32.53:0,33,1707	0/0:37,0:37:30.44:0,30,1513	0/0:37,0:35:42.14:0,42,1759	0/1:17,2:24:99:277,0,135	0/0:12,0:12:24.08:0,24,733	0/0:21,0:19:30.50:0,30,815	0/0:20,0:20:7.28:0,7,574	0/0:28,0:26:10.75:0,11,625	0/0:26,0:24:24.46:0,24,877	0/0:16,0:17:14.37:0,14,523	0/0:24,0:24:8.16:0,8,249	0/0:28,0:28:12.38:0,12,669	0/0:27,0:26:50.73:0,51,2070	0/0:31,0:31:35.30:0,35,1942	0/0:14,0:13:18.06:0,18,1037
chr10	58684827	.	TG	T	4117.77	PASS	AB=0.958;AC=40;AF=0.714;AN=56;BaseQRankSum=-1.287;DP=528;FS=18.366;HRun=12;HaplotypeScore=96.8255;InbreedingCoeff=0.7316;MQ=70.64;MQ0=0;MQRankSum=1.361;QD=10.24;ReadPosRankSum=5.457;VQSLOD=1.1908;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:18.73:0,19,179	0/0:6,0:6:6.51:0,7,29	0/0:20,0:19:2.96:0,3,144	0/1:10,0:8:7.56:13,0,8	0/0:6,0:6:11.74:0,12,72	1/1:23,0:23:53.51:262,54,0	1/1:27,0:27:61.39:291,61,0	0/0:17,0:19:10.26:0,10,43	0/0:22,0:22:21.48:0,21,196	1/1:9,8:19:24.79:164,25,0	1/1:7,1:8:2.94:20,3,0	1/1:29,0:29:57.39:298,57,0	1/1:7,14:22:20.42:263,20,0	1/1:10,12:23:34.84:258,35,0	1/1:3,12:18:30.01:203,30,0	1/1:38,0:37:81.59:412,82,0	0/0:25,0:25:14.76:0,15,105	0/1:15,0:15:1.95:2,0,166	1/1:7,3:13:4.27:102,4,0	1/1:3,3:6:2.94:23,3,0	1/1:6,11:19:24.98:174,25,0	1/1:26,0:26:55.01:311,55,0	1/1:13,0:13:28.24:142,28,0	1/1:24,0:24:55.95:264,56,0	1/1:4,11:19:29.96:203,30,0	1/1:4,10:14:23.84:177,24,0	1/1:9,15:25:52.78:394,53,0	1/1:3,7:10:17.92:139,18,0
chr10	58684839	.	GA	G	6231.65	PASS	AB=1.000;AC=28;AF=0.500;AN=56;BaseQRankSum=8.180;DP=558;FS=81.258;HRun=2;HaplotypeScore=87.3884;InbreedingCoeff=0.8379;MQ=71.37;MQ0=0;MQRankSum=0.356;QD=19.78;ReadPosRankSum=9.121;VQSLOD=1.1382;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:27,1:28:61.68:432,62,0	1/1:9,0:9:6.44:23,6,0	0/0:20,0:18:26.40:0,26,323	0/0:14,0:12:24.67:0,25,191	1/1:4,0:4:4.23:23,4,0	1/1:0,21:21:57.18:725,57,0	1/1:0,27:27:66.21:841,66,0	1/1:16,0:16:35.02:219,35,0	0/0:17,0:17:42.07:0,42,457	0/0:16,0:16:16.70:0,17,201	0/0:8,0:8:16.82:0,17,139	1/1:0,29:29:60.19:756,60,0	0/1:22,0:22:2:2,0,177	0/0:31,0:31:40.91:0,41,395	0/0:28,0:28:43.81:0,44,369	1/1:1,37:38:87.28:1099,87,0	1/1:20,0:20:3.04:11,3,0	1/1:16,3:19:26.72:278,27,0	0/0:13,0:13:21.48:0,21,181	0/0:5,0:5:9.97:0,10,89	0/0:27,0:27:45.56:0,46,353	1/1:0,21:21:57.09:678,57,0	1/1:0,13:13:30.09:376,30,0	1/1:0,23:23:60.19:767,60,0	0/0:27,0:26:35.58:0,36,365	0/0:19,0:19:7.03:0,7,230	0/1:25,0:24:1.08:1,0,180	0/0:18,0:18:33.89:0,34,276
chr10	58684840	.	A	AGG	5380.72	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=8.442;DP=559;FS=7.424;HRun=12;HaplotypeScore=102.3779;InbreedingCoeff=0.9718;MQ=70.95;MQ0=0;MQRankSum=-0.197;QD=20.00;ReadPosRankSum=5.982;VQSLOD=3.8114;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:28:71.85:757,72,0	1/1:0,9:9:8.25:180,8,0	0/0:20,0:18:41.61:0,42,493	0/0:14,0:12:23.98:0,24,242	1/1:4,0:4:10.09:60,10,0	1/1:21,0:21:54.56:417,55,0	1/1:27,0:27:64.96:531,65,0	1/1:4,14:19:45.13:673,45,0	0/0:16,0:16:42.12:0,42,641	0/0:16,0:16:45.13:0,45,617	0/0:8,0:8:18.05:0,18,256	1/1:29,0:29:40.92:339,41,0	0/0:23,0:23:57.18:0,57,802	0/0:31,0:31:81.21:0,81,1141	0/0:28,0:28:72.21:0,72,1007	1/1:37,0:36:86.57:721,87,0	1/1:0,18:18:12.04:243,12,0	1/1:19,0:19:44.79:440,45,0	0/0:13,0:13:36.11:0,36,498	0/0:5,0:5:10.06:0,10,171	0/0:28,0:28:66.14:0,66,872	1/1:21,0:21:44.05:297,44,0	1/1:13,0:13:24.87:235,25,0	1/1:24,0:24:59.83:488,60,0	0/0:27,0:26:69.19:0,69,997	0/0:19,0:19:32.65:0,33,624	0/0:24,0:23:72.24:0,72,1009	0/0:18,0:18:48.57:0,49,621
chr10	58685358	.	ACT	A	2720.47	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.953;DP=689;FS=2.770;HRun=0;HaplotypeScore=83.0427;InbreedingCoeff=0.9984;MQ=80.01;MQ0=0;MQRankSum=-1.097;QD=31.63;ReadPosRankSum=-2.589;VQSLOD=4.9375;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,126,2189	1/1:0,8:8:21.07:294,21,0	0/0:28,0:28:62.98:0,63,1129	0/0:33,0:32:84.28:0,84,1436	0/0:26,0:26:78.21:0,78,1314	0/0:16,0:16:45.15:0,45,804	0/0:22,0:22:60.21:0,60,1080	1/1:7,41:48:99:1686,123,0	0/0:22,0:22:66.23:0,66,1179	0/0:25,0:25:75.25:0,75,1322	0/0:24,0:24:69.24:0,69,1242	0/0:16,0:16:42.12:0,42,698	0/0:19,0:19:57.20:0,57,1026	0/0:28,0:28:84.29:0,84,1512	0/0:28,0:28:84.29:0,84,1504	0/0:24,0:24:72.25:0,72,1290	1/1:1,29:30:63.21:882,63,0	0/0:24,0:24:69.24:0,69,1220	0/0:25,0:25:66.18:0,66,1066	0/0:29,0:29:84.27:0,84,1481	0/0:37,0:37:99:0,105,1751	0/0:18,0:18:51.17:0,51,918	0/0:15,0:15:39.13:0,39,701	0/0:19,0:18:57.20:0,57,1026	0/0:17,0:17:51.17:0,51,912	0/0:24,0:24:72.25:0,72,1290	0/0:31,0:30:87.15:0,87,1496	0/0:11,0:11:33.11:0,33,575
chr10	58686038	.	A	ACTTACTCGAG	61882.99	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-6.183;DP=712;FS=1.556;HRun=0;HaplotypeScore=160.0184;InbreedingCoeff=0.9822;MQ=75.45;MQ0=0;MQRankSum=-12.361;QD=96.69;ReadPosRankSum=1.690;VQSLOD=5.0792;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,16:39:69.15:2902,69,0	1/1:5,6:17:33.07:1421,33,0	0/0:24,0:24:66.22:0,66,2040	0/0:20,0:20:59.98:0,60,1554	1/1:5,10:26:41.79:1682,42,0	1/1:2,14:27:45.11:2149,45,0	1/1:3,9:22:36.12:1669,36,0	1/1:24,10:54:99:5769,144,0	0/0:28,0:28:81.26:0,81,2546	1/1:3,14:33:90.26:3638,90,0	1/1:2,10:24:33.11:1682,33,0	1/1:6,10:23:42.10:2040,42,0	1/1:1,20:27:66.08:3195,66,0	1/1:8,26:39:99:5431,102,0	1/1:4,22:30:75.17:3527,75,0	1/1:3,11:24:42.14:2191,42,0	1/1:4,10:16:36.12:1648,36,0	1/1:1,9:12:12.35:1435,12,0	1/1:9,8:26:75.03:2816,75,0	1/1:3,8:21:33.08:1426,33,0	1/1:4,6:15:30.10:1321,30,0	1/1:5,11:25:51.17:2316,51,0	1/1:3,14:31:51.17:2314,51,0	1/1:5,4:12:21.07:999,21,0	1/1:2,15:24:54.10:2519,54,0	1/1:9,25:42:99:5417,117,0	1/1:3,11:21:36.08:1619,36,0	1/1:1,4:8:15.05:758,15,0
chr10	58686905	.	T	TACAC	7312.12	PASS	AB=0.606;AC=47;AF=0.839;AN=56;BaseQRankSum=1.032;DP=652;FS=24.317;HRun=0;HaplotypeScore=162.9144;InbreedingCoeff=0.5652;MQ=55.39;MQ0=5;MQRankSum=-1.209;QD=13.37;ReadPosRankSum=1.028;VQSLOD=2.5154;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:26:0.11:0,0,1	1/1:0,0:5:5.97:127,6,0	0/0:32,0:13:17.54:0,18,215	0/0:25,0:15:21.07:0,21,335	0/1:7,0:20:0:0,0,0	1/1:16,13:30:6.25:175,6,0	1/1:24,1:25:44.05:647,44,0	1/1:31,0:32:53.86:653,54,0	1/1:8,0:28:11.91:165,12,0	1/1:22,0:23:50.12:662,50,0	1/1:9,0:10:2.86:15,3,0	1/1:24,2:28:52.81:789,53,0	1/1:32,0:32:27.55:415,28,0	1/1:32,0:33:56.75:793,57,0	1/1:30,0:30:11.68:136,12,0	1/1:25,0:25:3.44:64,3,0	1/1:16,1:20:27.07:410,27,0	1/1:6,0:12:3.01:53,3,0	1/1:12,0:18:30.08:423,30,0	1/1:24,0:24:11.87:108,12,0	0/0:22,0:22:2.39:0,2,5	1/1:6,18:26:8.18:210,8,0	1/1:22,2:24:21.93:344,22,0	1/1:11,18:33:10.38:122,10,0	1/1:16,0:16:3.01:36,3,0	1/1:23,0:25:57.02:783,57,0	1/1:18,0:19:9.03:159,9,0	1/1:7,0:7:2.98:22,3,0
chr10	58686924	.	A	ACACACACTCTCT	14646.19	PASS	AB=0.957;AC=39;AF=0.696;AN=56;BaseQRankSum=-4.871;DP=664;FS=5.318;HRun=0;HaplotypeScore=192.6583;InbreedingCoeff=-0.0679;MQ=47.49;MQ0=6;MQRankSum=-3.185;QD=25.12;ReadPosRankSum=5.965;VQSLOD=2.7916;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:23:2.32:29,2,0	0/1:6,0:6:31.19:143,0,31	0/0:23,0:10:24.75:0,25,318	0/0:28,0:13:21.11:0,21,499	1/1:18,0:18:4.44:115,4,0	0/1:24,0:24:60.66:107,0,61	0/1:27,0:26:71.70:701,0,72	0/1:32,0:32:99:768,0,139	0/1:31,0:31:99:211,0,318	1/1:24,1:25:72.11:1940,72,0	1/1:4,7:16:3.13:171,3,0	0/1:31,0:31:99:874,0,152	1/1:2,28:42:30.57:1489,31,0	1/1:17,6:26:56.75:2087,57,0	1/1:1,19:28:12.43:688,12,0	0/1:2,0:23:14.38:76,0,14	0/1:21,0:21:55.77:688,0,56	1/1:13,0:13:18.06:495,18,0	1/1:15,0:15:36.12:791,36,0	1/1:1,17:25:11.60:373,12,0	0/0:6,15:29:0.47:0,0,1	0/1:27,0:27:50.47:50,0,92	0/1:22,0:22:99:490,0,126	0/1:32,0:32:11.37:11,0,93	1/1:0,16:22:3.01:54,3,0	1/1:11,0:26:71.48:1565,71,0	1/1:3,1:21:8.95:494,9,0	1/1:2,2:6:6.02:235,6,0
chr10	58686943	.	CTG	C	2903.65	PASS	AB=0.989;AC=29;AF=0.518;AN=56;BaseQRankSum=-1.652;DP=639;FS=7.352;HRun=0;HaplotypeScore=158.5733;InbreedingCoeff=0.6613;MQ=55.08;MQ0=5;MQRankSum=-0.495;QD=8.23;ReadPosRankSum=-2.414;VQSLOD=2.4837;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:17:2.45:18,2,0	1/1:7,0:7:13.56:98,14,0	0/0:22,0:10:22.65:0,23,264	0/0:38,0:24:17.84:0,18,343	1/1:16,0:16:14.74:122,15,0	1/1:21,0:21:17.09:148,17,0	1/1:22,1:22:41.94:332,42,0	1/1:30,0:30:70.12:549,70,0	0/0:27,0:27:38.82:0,39,482	0/0:25,1:26:6.70:0,7,569	0/0:19,0:19:35.30:0,35,350	1/1:23,1:24:43.21:442,43,0	0/0:37,0:37:37.47:0,37,491	0/1:29,1:30:33.33:33,0,472	0/0:23,0:23:23.83:0,24,221	1/1:17,0:17:12.45:140,12,0	1/1:23,0:23:1.47:119,1,0	1/1:12,0:12:12.90:104,13,0	0/1:16,0:15:8.99:9,0,257	0/0:27,0:27:5:0,5,228	0/0:27,0:26:14.92:0,15,115	1/1:30,1:31:31.38:295,31,0	1/1:22,1:23:45.24:391,45,0	1/1:32,1:33:27.96:249,28,0	0/0:19,0:19:11.98:0,12,99	0/1:30,0:30:63.04:63,0,464	0/0:17,0:17:19.94:0,20,164	0/0:4,0:4:3.01:0,3,47
chr10	58687033	.	TGAA	T	9868.47	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-6.171;DP=564;FS=3.191;HRun=0;HaplotypeScore=134.0031;InbreedingCoeff=0.9791;MQ=66.55;MQ0=0;MQRankSum=-1.024;QD=37.67;ReadPosRankSum=3.404;VQSLOD=5.8737;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:69.19:0,69,1420	1/1:0,7:7:21.07:322,21,0	0/0:31,0:28:21.35:0,21,727	0/0:32,0:30:43.86:0,44,933	0/0:13,0:13:36.12:0,36,744	0/0:20,0:20:59.52:0,60,497	0/0:16,0:16:35.51:0,36,308	1/1:3,9:12:30.03:412,30,0	0/0:24,0:23:63.22:0,63,1271	1/1:1,24:25:72.22:1090,72,0	1/1:1,6:7:12.04:174,12,0	0/0:31,0:31:77.75:0,78,819	1/1:3,25:28:75.25:1157,75,0	1/1:3,23:26:63.21:962,63,0	1/1:1,25:26:69.23:1066,69,0	0/0:18,0:18:45.14:0,45,850	1/1:2,20:22:51.17:789,51,0	0/0:10,0:10:30.10:0,30,644	1/1:2,6:8:18.06:278,18,0	1/1:3,18:21:42.14:630,42,0	1/1:1,20:20:48.16:742,48,0	0/0:35,0:35:83.45:0,83,975	0/0:23,0:23:59.05:0,59,551	0/0:21,0:21:47.47:0,47,400	1/1:2,17:19:48.16:742,48,0	1/1:2,20:22:54.15:809,54,0	1/1:2,14:16:39.13:603,39,0	1/1:0,2:2:6.02:93,6,0
chr10	58687037	.	GA	G	256.09	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=1.770;DP=575;FS=1.155;HRun=2;HaplotypeScore=153.8779;InbreedingCoeff=0.2016;MQ=69.65;MQ0=0;MQRankSum=-3.072;QD=0.97;ReadPosRankSum=6.201;VQSLOD=-0.6947;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:72.24:0,72,1057	1/1:7,0:7:7.95:21,8,0	0/0:33,2:29:36.60:0,37,843	0/0:34,2:34:18.81:0,19,843	0/0:14,0:14:36.12:0,36,539	0/0:22,0:22:63.18:0,63,917	0/0:17,0:17:39.02:0,39,525	0/1:12,0:12:11.22:11,0,18	0/0:24,0:23:66.21:0,66,968	0/1:26,0:26:40.18:40,0,57	0/1:8,0:8:1.14:1,0,19	0/0:31,0:31:87.07:0,87,1195	0/1:30,0:30:42.94:43,0,43	0/1:26,0:26:1.32:36,0,1	1/1:26,0:26:28.66:78,29,0	0/0:16,0:16:45.15:0,45,670	0/1:22,0:22:16.60:31,0,17	0/0:11,0:11:33.11:0,33,494	0/1:7,0:7:10.02:10,0,28	0/1:20,0:20:12.37:12,0,50	0/1:21,0:20:0.91:32,0,1	0/0:33,0:33:90.22:0,90,1306	0/0:22,0:22:60.03:0,60,840	0/0:23,0:23:50.92:0,51,702	0/1:20,0:20:17.50:31,0,18	0/1:21,0:21:27.60:28,0,57	1/1:15,0:15:16.51:45,17,0	1/1:2,0:2:2.49:7,2,0
chr10	58687045	.	T	TGAA	821.05	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-1.590;DP=571;FS=3.897;HRun=0;HaplotypeScore=171.6532;InbreedingCoeff=0.8943;MQ=68.88;MQ0=0;MQRankSum=0.543;QD=54.74;ReadPosRankSum=1.027;VQSLOD=4.5617;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:69.20:0,69,1031	0/0:7,0:7:20.74:0,21,260	0/0:35,0:25:51.47:0,51,613	0/0:35,0:30:48.69:0,49,568	0/0:15,0:15:39.12:0,39,566	0/0:22,0:22:59.82:0,60,410	0/0:17,0:17:23.50:0,23,168	0/0:14,0:14:33.04:0,33,446	0/0:22,0:21:57.19:0,57,872	0/0:26,0:26:75.22:0,75,1059	0/0:9,0:9:24.07:0,24,291	0/0:30,0:30:59.82:0,60,410	0/0:30,0:30:83.93:0,84,1134	0/0:26,0:26:62.79:0,63,827	0/0:26,0:26:71.96:0,72,947	1/1:0,15:15:42.14:916,42,0	0/0:22,0:22:54.18:0,54,758	0/0:11,0:11:33.11:0,33,517	0/0:8,0:8:21.07:0,21,288	0/0:18,0:18:38.71:0,39,510	0/0:23,0:22:48.16:0,48,659	0/0:33,0:33:65.22:0,65,446	0/0:21,0:21:46.84:0,47,308	0/0:23,0:23:44.15:0,44,302	0/0:19,0:19:53.76:0,54,720	0/0:20,0:20:54.05:0,54,784	0/0:14,0:14:39.13:0,39,553	0/0:2,0:2:6.02:0,6,84
chr10	58687046	.	GAAGAA	G	6640.13	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-5.848;DP=571;FS=7.040;HRun=0;HaplotypeScore=167.6830;InbreedingCoeff=0.9768;MQ=69.64;MQ0=0;MQRankSum=-3.663;QD=46.11;ReadPosRankSum=2.969;VQSLOD=4.3337;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:69.24:0,69,2036	0/0:7,0:7:20.74:0,21,343	0/0:36,0:26:48.79:0,49,1214	0/0:37,0:31:39.05:0,39,1430	0/0:15,0:15:42.13:0,42,1134	1/1:1,21:22:63.22:1305,63,0	1/1:2,14:16:24.08:496,24,0	0/0:14,0:14:36.12:0,36,753	0/0:21,0:20:57.20:0,57,1746	0/0:26,0:26:75.25:0,75,1563	0/0:9,0:9:24.08:0,24,565	1/1:6,24:30:66.23:1364,66,0	0/0:30,0:30:84.01:0,84,1552	0/0:26,0:26:65.81:0,66,1123	0/0:27,0:27:72.03:0,72,1249	0/0:15,0:15:42.14:0,42,898	0/0:22,0:22:54.18:0,54,1015	0/0:11,0:11:33.11:0,33,986	0/0:8,0:8:24.08:0,24,450	0/0:17,0:17:44.74:0,45,813	0/0:23,0:22:54.14:0,54,939	1/1:3,29:32:69.71:1427,70,0	1/1:4,17:21:47.91:993,48,0	1/1:1,22:23:51.18:1055,51,0	0/0:19,0:19:53.77:0,54,1055	0/0:20,0:20:54.05:0,54,1118	0/0:14,0:14:39.13:0,39,725	0/0:2,0:2:6.02:0,6,105
chr10	58687184	.	GGA	G	526.79	PASS	AB=0.884;AC=15;AF=0.278;AN=54;BaseQRankSum=6.473;DP=266;FS=10.723;HRun=0;HaplotypeScore=70.3201;InbreedingCoeff=0.4394;MQ=52.25;MQ0=12;MQRankSum=-5.968;QD=5.99;ReadPosRankSum=1.397;VQSLOD=1.5386;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:16:35.02:0,35,532	0/0:2,0:2:6.02:0,6,106	0/0:4,0:3:6.02:0,6,72	0/0:6,0:5:4.91:0,5,24	0/0:13,0:12:15.05:0,15,241	0/0:6,0:4:9.03:0,9,127	0/0:15,0:14:29.70:0,30,372	0/0:26,0:25:57.01:0,57,843	0/0:11,3:12:12.73:0,13,275	0/0:4,0:3:5.81:0,6,56	1/1:5,0:5:2.92:21,3,0	0/0:11,0:11:27.09:0,27,438	1/1:7,0:7:13.51:139,14,0	1/1:10,0:9:17.83:98,18,0	0/1:12,2:13:14.85:152,0,15	0/0:12,0:12:33.11:0,33,553	0/0:9,0:9:20.98:0,21,272	0/0:6,0:6:14.62:0,15,177	0/1:14,4:14:99:127,0,247	0/1:3,0:3:0:0,0,0	0/1:17,3:16:10.83:32,0,11	0/0:9,1:9:14.92:0,15,215	0/0:6,1:7:16.97:0,17,253	0/0:16,0:15:17.86:0,18,237	1/1:3,0:3:5.98:45,6,0	0/1:5,1:5:27.20:27,0,92	1/1:2,0:2:5.96:47,6,0	./.
chr10	58687196	.	G	GGA	1964.08	PASS	AB=0.938;AC=21;AF=0.389;AN=54;BaseQRankSum=7.135;DP=368;FS=5.481;HRun=0;HaplotypeScore=97.5193;InbreedingCoeff=0.3492;MQ=58.91;MQ0=12;MQRankSum=-5.623;QD=10.39;ReadPosRankSum=-0.153;VQSLOD=2.5358;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,1:23:52.84:0,53,656	0/0:3,0:3:6.02:0,6,82	0/0:12,0:10:27.02:0,27,288	0/1:12,0:11:29.28:29,0,54	0/0:14,0:13:18.06:0,18,247	0/0:7,0:5:9.01:0,9,106	0/1:16,0:15:4.01:4,0,296	0/0:33,0:32:69.21:0,69,776	0/1:18,0:16:20.02:20,0,267	1/1:6,1:6:7.27:101,7,0	1/1:4,0:4:3.01:38,3,0	0/0:17,0:17:48.15:0,48,638	1/1:11,3:14:35.18:468,35,0	1/1:14,2:15:9.04:352,9,0	1/1:16,0:15:13.16:361,13,0	0/0:15,0:15:39.13:0,39,529	0/1:15,1:16:12.14:12,0,387	0/0:8,0:8:20.80:0,21,259	0/1:23,0:19:99:230,0,168	0/0:4,0:4:0.47:0,0,1	0/1:21,3:21:64.28:64,0,105	0/0:13,0:12:29.68:0,30,329	0/0:7,0:7:11.23:0,11,148	0/0:21,1:21:20.82:0,21,331	1/1:6,0:6:6.02:69,6,0	0/1:9,3:11:34.40:276,0,34	1/1:3,0:3:9.03:116,9,0	./.
chr10	58687218	.	G	GA	8060.24	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-0.566;DP=447;FS=0.000;HRun=1;HaplotypeScore=79.4821;InbreedingCoeff=0.9804;MQ=77.53;MQ0=0;MQRankSum=-2.342;QD=39.13;ReadPosRankSum=2.178;VQSLOD=5.4611;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,24:24:63.21:1005,63,0	0/0:6,0:6:18.06:0,18,249	0/0:18,0:17:42.46:0,42,594	0/0:21,0:19:34.54:0,35,525	1/1:2,12:14:29.98:456,30,0	0/0:15,0:15:45.11:0,45,607	0/0:19,0:19:51.11:0,51,673	0/0:26,0:26:75.17:0,75,1024	0/0:15,0:15:39.13:0,39,544	1/1:1,11:12:31.80:522,32,0	1/1:3,9:12:33.09:480,33,0	0/0:29,0:29:81.25:0,81,1109	1/1:2,15:17:48.16:766,48,0	1/1:1,17:18:51.17:814,51,0	1/1:1,13:14:42.13:647,42,0	0/0:16,0:16:48.16:0,48,670	0/0:12,0:12:30.10:0,30,419	1/1:1,10:11:27.09:432,27,0	1/1:2,12:14:36.12:575,36,0	1/1:2,8:10:24.08:384,24,0	1/1:5,20:25:17.68:551,18,0	0/0:23,0:23:57.15:0,57,774	0/0:15,0:15:36.06:0,36,464	0/0:26,0:26:56.83:0,57,796	1/1:0,12:12:30.10:479,30,0	1/1:1,12:13:39.13:614,39,0	1/1:1,6:7:15.05:239,15,0	1/1:0,2:2:6.02:96,6,0
chr10	58687710	.	T	TTCCAGGAAC	64024.64	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-1.927;DP=753;FS=2.604;HRun=0;HaplotypeScore=197.6168;InbreedingCoeff=0.9944;MQ=77.72;MQ0=0;MQRankSum=-18.832;QD=117.26;ReadPosRankSum=0.358;VQSLOD=5.3115;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,34:44:99:5085,111,0	1/1:6,9:16:42.14:1980,42,0	0/0:30,0:30:60.32:0,60,1814	0/0:33,0:33:72.14:0,72,2143	1/1:13,21:36:99:4104,99,0	0/0:27,0:27:75.26:0,75,2135	0/0:35,0:35:99:0,102,2893	1/1:21,12:39:99:4421,111,0	1/1:3,23:27:72.25:3381,72,0	1/1:7,24:33:96.33:4269,96,0	1/1:7,27:37:99:4318,99,0	0/0:17,0:17:51.18:0,51,1498	1/1:8,19:27:75.26:3476,75,0	1/1:1,24:31:78.27:3668,78,0	1/1:7,19:28:78.27:3519,78,0	1/1:4,24:29:78.27:3779,78,0	1/1:6,7:16:27.09:1123,27,0	1/1:4,6:13:30.10:1419,30,0	1/1:14,9:25:75.24:2744,75,0	1/1:6,23:32:84.28:3637,84,0	1/1:6,7:17:27.09:1103,27,0	0/0:18,0:18:54.18:0,54,1570	0/0:27,0:27:78.23:0,78,2090	0/0:20,0:20:60.21:0,60,1795	1/1:5,14:19:54.18:2338,54,0	1/1:13,26:42:99:5069,117,0	1/1:12,17:31:87.30:4009,87,0	1/1:0,4:4:12.04:582,12,0
chr10	58688212	.	T	TTG	1216.18	PASS	AB=0.956;AC=21;AF=0.389;AN=54;BaseQRankSum=0.638;DP=690;FS=16.931;HRun=0;HaplotypeScore=129.3483;InbreedingCoeff=0.4155;MQ=61.30;MQ0=13;MQRankSum=-0.946;QD=3.20;ReadPosRankSum=-0.656;VQSLOD=1.0106;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:46,0:46:20.80:184,21,0	1/1:8,0:9:3.01:44,3,0	./.	0/1:33,0:21:0:0,0,0	1/1:28,0:27:14.98:152,15,0	0/0:20,0:20:8.79:0,9,63	0/1:17,1:16:32.16:32,0,78	1/1:25,0:24:14.65:113,15,0	1/1:16,12:31:18.06:265,18,0	0/1:28,0:27:26.81:27,0,51	0/0:13,0:12:14.86:0,15,136	0/1:27,0:27:11.96:12,0,65	0/0:16,0:16:5.75:0,6,64	0/0:26,0:26:14.81:0,15,133	0/0:31,0:31:15.04:0,15,161	1/1:21,0:21:9:80,9,0	1/1:41,0:39:32.99:300,33,0	0/1:19,8:28:18.87:122,0,19	0/0:24,0:24:3:0,3,32	0/1:13,0:13:0.01:0,0,0	0/1:31,0:31:5.22:59,0,5	0/0:24,0:24:8.93:0,9,77	0/0:16,0:16:5.96:0,6,55	0/0:42,0:42:28.52:0,29,280	0/0:22,0:22:6.46:0,6,55	0/0:23,0:23:2.97:0,3,87	0/0:14,0:15:11.82:0,12,110	0/0:9,0:11:9.13:0,9,61
chr10	58690896	.	AG	A	1545.50	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.134;DP=810;FS=0.552;HRun=3;HaplotypeScore=97.1384;InbreedingCoeff=0.9994;MQ=76.32;MQ0=0;MQRankSum=-1.668;QD=30.30;ReadPosRankSum=2.093;VQSLOD=3.2467;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,129,1833	0/0:9,0:9:27.05:0,27,365	0/0:22,0:22:60.19:0,60,815	0/0:31,0:31:76.86:0,77,1108	0/0:25,0:25:72.23:0,72,1017	0/0:23,0:23:66.22:0,66,950	0/0:28,0:28:84.25:0,84,1172	0/0:34,0:34:96.31:0,96,1349	0/0:27,0:27:81.25:0,81,1131	0/0:35,0:35:99:0,99,1357	0/0:22,0:22:63.20:0,63,876	0/0:38,0:38:99:0,111,1561	0/0:41,0:41:99:0,120,1669	0/0:28,0:28:84.27:0,84,1192	0/0:37,0:37:99:0,105,1460	1/1:2,30:32:44.09:998,44,0	0/0:46,0:45:99:0,135,1885	1/1:0,19:19:54.17:669,54,0	0/0:24,0:24:72.23:0,72,1004	0/0:29,0:29:84.26:0,84,1174	0/0:36,0:36:99:0,105,1485	0/0:34,0:34:96.31:0,96,1349	0/0:23,0:23:69.20:0,69,956	0/0:39,0:39:99:0,114,1639	0/0:16,0:16:48.16:0,48,690	0/0:27,0:27:78.25:0,78,1098	0/0:26,0:26:78.23:0,78,1085	0/0:13,0:13:39.12:0,39,542
chr10	58691498	.	GC	G	1114.18	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-1.934;DP=678;FS=3.491;HRun=1;HaplotypeScore=98.8433;InbreedingCoeff=0.9380;MQ=84.84;MQ0=0;MQRankSum=-1.415;QD=38.42;ReadPosRankSum=1.519;VQSLOD=3.9965;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,153,2386	0/0:3,0:3:9.03:0,9,144	0/0:24,0:24:69.22:0,69,1039	0/0:28,0:28:80.22:0,80,1099	0/0:24,0:24:69.22:0,69,1079	0/0:24,0:24:72.25:0,72,1150	0/0:27,0:27:81.24:0,81,1244	0/0:33,0:33:99:0,99,1560	1/1:0,29:29:87.29:1209,87,0	0/0:31,0:31:93.31:0,93,1448	0/0:13,0:13:39.13:0,39,623	0/0:19,0:19:57.18:0,57,888	0/0:20,0:20:60.20:0,60,949	0/0:23,0:23:69.24:0,69,1103	0/0:37,0:37:99:0,111,1751	0/0:21,0:21:63.20:0,63,984	0/0:26,0:26:78.24:0,78,1216	0/0:12,0:12:36.12:0,36,558	0/0:22,0:22:66.23:0,66,1053	0/0:29,0:29:87.30:0,87,1386	0/0:34,0:34:99:0,102,1597	0/0:17,0:17:48.16:0,48,764	0/0:28,0:28:81.26:0,81,1271	0/0:19,0:19:54.18:0,54,858	0/0:23,0:23:69.22:0,69,1081	0/0:29,0:29:87.30:0,87,1390	0/0:26,0:25:78.25:0,78,1222	0/0:6,0:6:18.06:0,18,288
chr10	58692181	.	CA	C	3924.74	PASS	AB=1.000;AC=25;AF=0.446;AN=56;BaseQRankSum=8.537;DP=514;FS=8.967;HRun=11;HaplotypeScore=95.4153;InbreedingCoeff=0.8952;MQ=74.83;MQ0=0;MQRankSum=-2.905;QD=18.60;ReadPosRankSum=0.732;VQSLOD=3.9334;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:78.18:0,78,963	0/0:8,1:9:2.42:0,2,231	0/1:15,0:14:12.74:13,0,165	0/0:11,0:11:8.98:0,9,79	0/0:20,1:22:35.30:0,35,545	0/0:16,0:17:44.95:0,45,462	0/0:22,0:22:44:0,44,469	0/0:16,0:16:39.10:0,39,416	0/0:13,0:13:36.07:0,36,373	1/1:6,13:19:41.78:335,42,0	1/1:3,11:14:35.93:292,36,0	0/0:19,0:19:48.10:0,48,493	1/1:5,15:20:53.91:437,54,0	1/1:7,10:17:32.94:271,33,0	1/1:2,10:12:29.96:246,30,0	0/0:19,0:19:48.08:0,48,485	0/0:30,0:30:69.14:0,69,715	0/0:23,0:23:40.45:0,40,524	1/1:2,17:19:47.93:392,48,0	1/1:1,19:20:56.93:468,57,0	1/1:3,7:10:17.98:148,18,0	0/0:18,0:18:51.13:0,51,543	0/0:22,0:23:68.99:0,69,704	0/0:17,0:17:39.09:0,39,409	1/1:2,17:19:50.92:418,51,0	1/1:9,19:28:62.87:511,63,0	1/1:0,11:11:26.97:222,27,0	1/1:0,7:7:20.97:172,21,0
chr10	58692269	.	GA	G	12247.78	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=14.747;DP=597;FS=1.577;HRun=6;HaplotypeScore=94.1107;InbreedingCoeff=0.9853;MQ=68.67;MQ0=0;MQRankSum=-1.165;QD=28.03;ReadPosRankSum=1.255;VQSLOD=5.1666;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,51:53:99:1384,129,0	1/1:0,3:3:9.02:97,9,0	0/0:10,0:10:30.10:0,30,386	0/0:12,0:11:25.21:0,25,276	1/1:4,35:39:96.19:1019,96,0	0/0:24,0:24:63.20:0,63,816	0/0:22,0:21:63.19:0,63,805	1/1:2,30:32:90.17:935,90,0	0/0:15,0:15:45.11:0,45,548	1/1:3,21:24:66.16:703,66,0	1/1:2,24:26:68.53:734,69,0	0/0:26,0:26:72.20:0,72,916	1/1:0,18:18:45.11:483,45,0	1/1:0,14:14:42.11:451,42,0	1/1:3,15:18:45.11:483,45,0	1/1:0,22:22:60.15:645,60,0	1/1:1,36:37:96.23:1024,96,0	1/1:4,10:14:27.06:290,27,0	1/1:8,14:22:63:638,63,0	1/1:3,17:20:54.12:572,54,0	1/1:0,7:7:15.04:161,15,0	0/0:9,0:9:27.09:0,27,355	0/0:25,0:25:69.22:0,69,901	0/0:17,0:17:51.17:0,51,671	1/1:2,28:30:81.19:863,81,0	1/1:8,24:32:93.22:991,93,0	1/1:0,20:20:57.14:613,57,0	1/1:0,6:6:15.04:161,15,0
chr10	58695368	.	TC	T	269.55	PASS	AB=0.883;AC=17;AF=0.304;AN=56;BaseQRankSum=4.495;DP=274;FS=0.000;HRun=3;HaplotypeScore=78.7756;InbreedingCoeff=-0.2529;MQ=33.81;MQ0=63;MQRankSum=-1.148;QD=2.28;ReadPosRankSum=3.527;VQSLOD=-0.5607;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:4:6.35:0,6,46	1/1:1,0:1:3:27,3,0	0/0:28,0:1:3.01:0,3,39	0/0:41,0:6:6.53:0,7,152	0/0:3,0:2:2.99:0,3,23	0/0:2,0:1:2.98:0,3,21	1/1:16,2:3:6.39:43,6,0	0/0:17,0:7:17.97:0,18,199	0/1:4,0:3:11.55:12,0,24	0/1:5,1:6:19.02:19,0,132	0/1:9,2:11:51.96:52,0,95	0/0:6,0:5:7.57:0,8,75	0/1:10,1:11:32.46:32,0,211	0/0:3,0:3:8.94:0,9,79	0/1:8,1:8:16.55:17,0,144	0/1:6,1:5:34.21:41,0,34	0/1:10,0:6:18.41:18,0,50	0/1:5,2:4:43.29:49,0,43	0/1:5,1:3:28.14:28,0,55	0/0:7,0:7:11.70:0,12,81	0/0:15,0:11:15.34:0,15,128	0/0:2,0:2:0:0,0,0	0/0:5,0:5:6.49:0,6,79	0/0:13,1:5:2.17:0,2,38	0/1:7,1:8:24.39:24,0,73	0/1:9,1:9:13:13,0,218	0/1:5,1:6:19.24:19,0,128	0/1:3,1:4:25.15:25,0,62
chr10	58695375	.	CTT	C	928.44	PASS	AB=0.673;AC=26;AF=0.591;AN=44;BaseQRankSum=-0.797;DP=178;FS=1.018;HRun=5;HaplotypeScore=72.6732;InbreedingCoeff=0.0492;MQ=33.77;MQ0=23;MQRankSum=-1.227;QD=12.89;ReadPosRankSum=0.631;VQSLOD=-0.3780;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,0:1:2.88:15,3,0	0/0:1,0:1:0.89:0,1,2	0/0:38,0:4:0.68:0,1,34	0/0:45,0:7:18.96:0,19,162	./.	1/1:1,0:1:1.82:5,2,0	1/1:9,0:3:8.77:55,9,0	./.	1/1:1,0:1:2.99:24,3,0	0/1:1,3:4:11.96:98,0,12	1/1:2,5:7:3.64:59,4,0	1/1:3,0:3:2.37:8,2,0	1/1:2,3:5:7.88:114,8,0	./.	0/1:2,4:5:6.83:134,0,7	0/0:4,0:3:5.14:0,5,24	0/0:4,0:3:2.68:0,3,11	0/1:4,0:3:9.45:9,0,11	0/1:2,1:3:13.55:35,0,14	1/1:0,2:2:6.02:75,6,0	1/1:5,3:7:8.85:91,9,0	./.	./.	./.	0/1:1,3:4:0.09:84,0,0	0/1:1,3:4:11.25:98,0,11	0/1:1,3:4:7.61:101,0,8	0/1:2,1:3:1.01:51,0,1
chr10	58695387	.	CT	C	639.07	PASS	AB=0.769;AC=25;AF=0.595;AN=42;BaseQRankSum=-1.011;DP=169;FS=1.023;HRun=2;HaplotypeScore=74.7912;InbreedingCoeff=0.1284;MQ=43.90;MQ0=15;MQRankSum=-0.949;QD=5.76;ReadPosRankSum=-0.532;VQSLOD=0.3876;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:1,0:1:2.92:0,3,17	./.	0/0:50,0:6:9.68:0,10,141	0/1:58,0:8:9.96:10,0,108	./.	1/1:0,1:1:2.90:16,3,0	1/1:2,0:2:5.80:33,6,0	./.	0/0:1,0:1:2.50:0,2,9	0/1:0,3:4:1.39:91,0,1	1/1:1,4:7:2.39:52,2,0	./.	1/1:0,3:5:8.98:90,9,0	./.	1/1:0,4:5:1.89:90,2,0	0/0:1,0:2:5.92:0,6,39	0/0:1,0:1:2.97:0,3,20	0/1:1,0:3:14.52:15,0,37	1/1:1,1:2:2.98:39,3,0	1/1:0,2:2:2.88:38,3,0	1/1:3,3:6:6.31:22,6,0	./.	./.	0/1:0,0:1:0:0,0,0	0/1:0,3:4:4.01:66,0,4	0/1:1,2:4:11.58:65,0,12	0/1:0,3:4:1.13:95,0,1	1/1:2,1:3:5.03:44,5,0
chr10	58695398	.	TC	T	211.70	PASS	AB=0.739;AC=13;AF=0.382;AN=34;BaseQRankSum=-0.944;DP=136;FS=3.166;HRun=2;HaplotypeScore=71.5596;InbreedingCoeff=-0.1191;MQ=47.87;MQ0=12;MQRankSum=0.215;QD=5.72;ReadPosRankSum=-0.182;VQSLOD=0.6122;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:46,0:6:11.70:0,12,135	0/0:44,0:7:4.07:0,4,37	./.	./.	0/0:1,0:1:3:0,3,26	./.	0/0:1,0:1:3.01:0,3,44	0/1:2,2:4:10.86:56,0,11	0/1:4,1:5:1.43:17,0,1	./.	0/1:4,1:5:4.84:14,0,5	./.	0/1:1,3:4:26.21:43,0,26	0/0:1,0:1:3.01:0,3,40	0/0:1,0:1:3.01:0,3,39	0/1:2,0:2:17.63:18,0,33	1/1:1,1:2:2.99:24,3,0	1/1:1,1:2:2.97:20,3,0	1/1:5,1:6:0.16:1,0,0	./.	./.	./.	0/0:2,0:2:2.94:0,3,18	0/1:1,2:3:31.34:67,0,31	0/1:2,2:4:32.27:60,0,32	./.
chr10	58695403	.	C	CTAT	301.24	PASS	AB=0.914;AC=15;AF=0.469;AN=32;BaseQRankSum=-0.456;DP=116;FS=20.352;HRun=0;HaplotypeScore=65.2303;InbreedingCoeff=0.1035;MQ=50.88;MQ0=12;MQRankSum=-0.332;QD=4.50;ReadPosRankSum=-1.908;VQSLOD=-0.1078;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:40,0:5:11.83:0,12,186	0/1:39,0:6:2.49:2,0,80	./.	./.	0/0:1,0:1:2.74:0,3,12	./.	0/0:1,0:1:3.01:0,3,52	1/1:2,0:2:2.88:15,3,0	1/1:2,1:3:8.88:61,9,0	./.	1/1:2,1:3:3.01:51,3,0	./.	0/1:1,3:4:39.73:97,0,40	0/0:1,0:1:3.01:0,3,53	0/0:1,0:1:3:0,3,29	0/0:2,0:2:3.48:0,3,53	1/1:1,1:2:3.01:55,3,0	1/1:0,1:1:3.01:52,3,0	0/1:5,0:5:0.25:0,0,0	./.	./.	./.	./.	0/1:3,0:3:43.45:49,0,43	0/1:3,0:3:28.39:28,0,44	./.
chr10	58695539	.	CCTCT	C	5469.66	PASS	AB=1.000;AC=28;AF=0.500;AN=56;BaseQRankSum=12.694;DP=515;FS=8.632;HRun=0;HaplotypeScore=110.6346;InbreedingCoeff=0.5870;MQ=41.86;MQ0=40;MQRankSum=-11.336;QD=24.64;ReadPosRankSum=5.505;VQSLOD=4.0507;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:22:54.18:0,54,823	0/0:6,0:6:15.05:0,15,228	0/0:54,0:9:1.87:0,2,276	0/0:76,0:13:4.91:0,5,219	0/0:10,0:10:23.99:0,24,357	0/0:16,0:14:42.14:0,42,627	0/0:31,0:27:20.24:0,20,704	0/0:23,0:18:44.21:0,44,659	0/0:12,0:11:1.11:0,1,244	1/1:4,18:20:60.16:980,60,0	1/1:3,11:14:23.98:371,24,0	0/1:12,0:11:20.13:20,0,226	1/1:2,9:11:29.69:481,30,0	1/1:3,11:12:33.07:540,33,0	1/1:3,9:9:9.03:156,9,0	0/1:20,0:19:99:105,0,511	0/1:13,0:10:13.36:13,0,288	0/1:11,0:9:53.04:53,0,155	1/1:3,9:10:27.09:456,27,0	1/1:1,14:15:24.08:415,24,0	1/1:10,2:7:5.83:38,6,0	0/0:10,0:9:24.08:0,24,367	0/0:8,0:7:17.36:0,17,274	0/0:22,0:17:39.69:0,40,551	1/1:0,18:18:36.08:590,36,0	1/1:5,19:22:57.19:974,57,0	1/1:2,4:6:14.94:226,15,0	1/1:1,5:5:3.01:52,3,0
chr10	58695544	.	CTCT	C	1152	PASS	AB=0.973;AC=24;AF=0.429;AN=56;BaseQRankSum=13.649;DP=563;FS=9.489;HRun=0;HaplotypeScore=126.6007;InbreedingCoeff=0.4594;MQ=44.98;MQ0=35;MQRankSum=-11.710;QD=3.89;ReadPosRankSum=7.122;VQSLOD=0.8454;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:24:60.20:0,60,1337	0/0:7,0:7:17.74:0,18,362	0/0:64,0:14:15.29:0,15,516	0/1:96,0:19:17.23:17,0,392	0/0:13,0:13:33.08:0,33,653	0/0:17,0:15:45.15:0,45,937	0/0:30,1:28:45.60:0,46,1147	0/0:26,0:21:53.36:0,53,1145	0/0:11,1:11:17.46:0,17,400	1/1:22,0:20:33.80:238,34,0	1/1:13,0:13:3.42:89,3,0	0/0:12,0:12:23.53:0,24,451	1/1:10,0:10:25.99:138,26,0	0/1:14,0:13:28.91:112,0,29	1/1:10,0:9:8.63:45,9,0	0/1:20,2:21:44.73:45,0,928	0/0:16,0:13:13.97:0,14,558	0/1:11,1:10:18.19:18,0,259	0/1:13,0:11:19.26:91,0,19	1/1:15,0:15:23.02:120,23,0	1/1:12,0:7:2.94:18,3,0	0/0:11,0:10:26.88:0,27,600	0/0:8,0:8:17.76:0,18,420	0/0:22,0:19:48.05:0,48,1008	1/1:18,0:18:17.14:143,17,0	0/1:27,0:25:2.99:207,0,3	1/1:5,0:5:1.08:48,1,0	1/1:6,0:5:2.88:15,3,0
chr10	58696581	.	TC	T	4114.33	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=12.377;DP=811;FS=9.448;HRun=5;HaplotypeScore=76.2018;InbreedingCoeff=0.9987;MQ=77.70;MQ0=0;MQRankSum=-0.022;QD=28.97;ReadPosRankSum=-0.080;VQSLOD=3.5407;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,40:43:99:1209,108,0	1/1:1,8:9:21.06:238,21,0	0/0:21,0:21:53.31:0,53,601	0/0:14,0:14:31.27:0,31,396	1/1:0,30:30:90.19:994,90,0	0/0:31,0:31:90.29:0,90,1215	0/0:24,0:24:57.15:0,57,732	1/1:7,29:36:87.15:924,87,0	0/0:35,0:35:99:0,102,1285	0/0:31,0:31:81.26:0,81,1096	0/0:27,0:27:81.25:0,81,1077	0/0:31,0:31:84.26:0,84,1112	0/0:31,0:31:93.27:0,93,1223	0/0:30,0:30:87.23:0,87,1124	0/0:28,0:28:69.21:0,69,911	0/0:30,0:30:87.25:0,87,1141	1/1:2,22:24:66.19:749,66,0	0/0:17,0:17:42.09:0,42,552	0/0:28,0:28:72.19:0,72,948	0/0:35,0:35:99:0,99,1353	0/0:49,0:49:99:0,138,1854	0/0:36,0:36:99:0,105,1428	0/0:29,0:29:84.23:0,84,1082	0/0:34,0:34:96.29:0,96,1278	0/0:42,0:42:99:0,123,1604	0/0:28,0:28:75.24:0,75,1007	0/0:26,0:26:72.24:0,72,983	0/0:12,0:12:27.09:0,27,369
chr10	58698780	.	TC	T	990.15	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.783;DP=741;FS=10.700;HRun=1;HaplotypeScore=76.7467;InbreedingCoeff=0.9998;MQ=86.10;MQ0=0;MQRankSum=-2.432;QD=31.94;ReadPosRankSum=1.814;VQSLOD=2.2722;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,120,1893	0/0:13,0:13:39.13:0,39,623	0/0:37,0:37:99:0,108,1589	0/0:26,1:27:60.18:0,60,1056	0/0:34,0:34:99:0,102,1578	0/0:27,0:27:81.28:0,81,1292	0/0:20,0:20:60.18:0,60,932	0/0:36,0:36:99:0,108,1726	1/1:1,30:31:36.33:1085,36,0	0/0:29,0:29:87.28:0,87,1352	0/0:18,0:18:54.18:0,54,863	0/0:21,0:21:63.20:0,63,980	0/0:29,0:29:87.30:0,87,1390	0/0:26,0:26:78.27:0,78,1247	0/0:30,0:30:90.28:0,90,1390	0/0:22,0:22:66.21:0,66,1030	0/0:35,0:35:99:0,105,1652	0/0:16,0:16:48.16:0,48,762	0/0:20,0:20:60.19:0,60,938	0/0:35,0:35:99:0,99,1541	0/0:40,0:40:99:0,117,1800	0/0:28,0:28:84.27:0,84,1319	0/0:22,0:22:66.21:0,66,1031	0/0:17,0:17:51.17:0,51,809	0/0:17,0:17:51.16:0,51,790	0/0:23,0:23:69.23:0,69,1081	0/0:32,0:32:96.30:0,96,1480	0/0:15,0:15:45.15:0,45,718
chr10	58701147	.	G	GCCCC	2009.14	PASS	AC=14;AF=0.259;AN=54;BaseQRankSum=1.900;DP=758;FS=0.646;HRun=7;HaplotypeScore=136.3199;InbreedingCoeff=0.8893;MQ=89.34;MQ0=0;MQRankSum=-5.832;QD=15.34;ReadPosRankSum=-1.831;VQSLOD=-0.3270;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:16:8.99:156,9,0	./.	0/0:36,0:36:72.63:0,73,1067	0/0:29,0:29:66.06:0,66,926	1/1:11,0:11:2.97:20,3,0	0/0:19,0:19:57.19:0,57,891	0/0:42,0:42:99:0,114,1781	1/1:9,0:9:6.02:93,6,0	1/1:14,15:31:24.08:580,24,0	0/0:35,0:35:87.24:0,87,1344	0/0:22,0:22:60.14:0,60,890	0/0:58,0:58:99:0,153,2359	0/0:34,0:34:90.23:0,90,1350	0/0:37,0:38:99:0,111,1711	0/0:36,0:36:99:0,99,1543	1/1:13,14:31:54.18:1151,54,0	1/1:20,0:20:6.44:47,6,0	1/1:12,1:13:6.02:136,6,0	0/0:18,0:18:36.05:0,36,504	0/0:30,0:30:81.26:0,81,1245	0/0:45,0:46:99:0,116,1754	0/0:21,0:21:57.13:0,57,865	0/0:27,0:27:75.23:0,75,1135	0/0:30,0:30:90.28:0,90,1358	0/0:25,0:25:69.22:0,69,1059	0/0:39,0:39:99:0,105,1640	0/0:34,0:33:84.24:0,84,1282	0/0:6,0:6:12.03:0,12,188
chr10	58706641	.	G	GGACAGA	3695.58	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-7.440;DP=668;FS=1.745;HRun=0;HaplotypeScore=137.3047;InbreedingCoeff=0.9874;MQ=64.45;MQ0=4;MQRankSum=-4.050;QD=30.05;ReadPosRankSum=-5.945;VQSLOD=2.5076;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:7,16:25:17.20:345,17,0	1/1:3,6:9:18.01:465,18,0	0/0:41,0:27:56.52:0,57,1091	0/0:27,0:24:51.15:0,51,986	1/1:7,21:31:30.10:680,30,0	0/0:32,0:32:90.28:0,90,1858	0/0:26,0:26:69.22:0,69,1403	1/1:12,21:40:84.20:1797,84,0	0/0:21,0:21:57.17:0,57,1181	0/0:30,0:30:75.22:0,75,1425	0/0:20,0:20:42.14:0,42,892	0/0:15,0:15:36.11:0,36,759	0/0:23,0:23:62.99:0,63,1302	0/0:20,0:20:51.17:0,51,1090	0/0:27,0:27:72.21:0,72,1461	0/0:20,0:20:54.18:0,54,1144	1/1:6,9:18:12.04:408,12,0	0/0:16,0:16:20.95:0,21,783	0/0:25,0:24:68.97:0,69,1265	0/0:26,0:26:72.20:0,72,1443	0/0:17,0:17:45.14:0,45,892	0/0:20,0:20:42.12:0,42,821	0/0:23,0:23:60.20:0,60,1254	0/0:23,0:23:63.19:0,63,1260	0/0:21,0:21:60.20:0,60,1249	0/0:28,0:27:72.22:0,72,1479	0/0:29,0:29:72.22:0,72,1513	0/0:14,0:14:39.03:0,39,609
chr10	58706826	.	ATTG	A	5124.89	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=13.563;DP=640;FS=0.788;HRun=0;HaplotypeScore=90.8199;InbreedingCoeff=0.9865;MQ=78.35;MQ0=0;MQRankSum=-4.206;QD=37.41;ReadPosRankSum=0.324;VQSLOD=5.5594;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,33:34:75.21:1176,75,0	1/1:3,13:16:42.06:608,42,0	0/0:15,0:15:37.16:0,37,605	0/0:18,0:18:47.51:0,48,1030	1/1:1,26:27:75.05:1051,75,0	0/0:24,0:24:69.24:0,69,1513	0/0:17,0:17:42.14:0,42,923	1/1:3,25:28:75.21:1134,75,0	0/0:21,0:21:60.21:0,60,1289	0/0:28,0:28:84.29:0,84,1797	0/0:25,0:25:72.21:0,72,1439	0/0:20,0:20:54.19:0,54,1163	0/0:22,0:22:66.19:0,66,1358	0/0:22,0:22:66.23:0,66,1398	0/0:23,0:23:69.22:0,69,1465	0/0:22,0:22:66.23:0,66,1419	1/1:2,30:32:72.25:1155,72,0	0/0:21,0:21:54.19:0,54,1173	0/0:14,0:14:33.11:0,33,716	0/0:21,0:21:63.20:0,63,1317	0/0:17,0:17:48.15:0,48,1018	0/0:22,0:22:63.22:0,63,1390	0/0:21,0:21:60.21:0,60,1320	0/0:28,0:28:78.27:0,78,1668	0/0:29,0:29:84.27:0,84,1795	0/0:35,0:35:99:0,105,2304	0/0:35,0:35:99:0,102,2112	0/0:3,0:3:9.03:0,9,196
chr10	58707511	.	ATTT	A	7543.33	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-4.374;DP=561;FS=2.574;HRun=11;HaplotypeScore=96.5619;InbreedingCoeff=0.9578;MQ=67.98;MQ0=0;MQRankSum=-2.981;QD=30.17;ReadPosRankSum=1.438;VQSLOD=4.3894;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:3,0:30:71.77:0,72,597	0/0:2,0:5:8.97:0,9,69	0/0:17,0:15:33.67:0,34,501	0/0:6,0:6:1.45:0,1,187	0/0:2,0:26:77.76:0,78,646	0/0:27,0:27:66.23:0,66,1320	0/0:15,0:15:39.13:0,39,788	0/0:11,0:41:92.67:0,93,721	0/0:4,0:24:53.79:0,54,414	1/1:1,18:19:54.16:709,54,0	1/1:0,9:9:21.05:272,21,0	0/0:18,0:18:51.17:0,51,1002	1/1:0,22:22:63.20:828,63,0	1/1:1,20:21:51.15:670,51,0	1/1:4,13:17:33.09:434,33,0	0/0:1,0:16:17.44:0,17,38	0/0:2,0:18:50.85:0,51,434	0/0:2,0:17:16.20:0,16,35	1/1:5,18:22:51.12:655,51,0	1/1:4,17:21:36.03:472,36,0	1/1:5,17:22:36.08:473,36,0	0/0:21,0:21:54.19:0,54,1068	0/0:13,0:15:38.69:0,39,770	0/0:15,0:15:42.14:0,42,835	1/1:2,26:28:63.18:825,63,0	1/1:2,24:27:70.78:943,71,0	1/1:6,24:30:66.17:867,66,0	1/1:1,10:11:30.10:394,30,0
chr10	58709276	.	G	GTT	8125.13	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=10.372;DP=764;FS=20.550;HRun=11;HaplotypeScore=154.1482;InbreedingCoeff=0.9773;MQ=76.57;MQ0=4;MQRankSum=-3.696;QD=16.48;ReadPosRankSum=-4.969;VQSLOD=0.4485;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:7,1:28:30.03:280,30,0	1/1:1,6:7:12:150,12,0	0/0:33,0:32:35.71:0,36,291	0/0:20,0:18:19.96:0,20,190	1/1:8,3:44:99:1081,109,0	0/0:26,0:27:71.82:0,72,674	0/0:25,0:25:64.67:0,65,613	1/1:12,21:34:37.07:799,37,0	0/0:19,0:22:44.93:0,45,476	1/1:12,0:31:52.15:495,52,0	1/1:5,0:17:43.02:393,43,0	0/0:25,0:25:53.91:0,54,507	1/1:13,1:35:33.02:315,33,0	1/1:6,2:27:44.67:428,45,0	1/1:6,5:25:45.02:486,45,0	0/0:23,0:23:63.06:0,63,604	1/1:4,19:25:57.19:811,57,0	1/1:12,1:27:6.58:116,7,0	1/1:11,0:17:29.09:285,29,0	1/1:10,1:30:63.06:598,63,0	1/1:3,0:14:15.87:134,16,0	0/0:20,0:23:44.18:0,44,398	0/0:32,0:32:64.97:0,65,647	0/0:37,0:39:59.18:0,59,799	1/1:10,1:37:46.19:417,46,0	1/1:10,4:36:81.48:778,81,0	1/1:15,2:30:40.25:385,40,0	1/1:7,0:22:18.03:174,18,0
chr10	58711987	.	T	TG	6260.90	PASS	AB=0.808;AC=40;AF=0.714;AN=56;BaseQRankSum=3.876;DP=643;FS=0.000;HRun=9;HaplotypeScore=107.6386;InbreedingCoeff=0.7383;MQ=69.71;MQ0=0;MQRankSum=-1.923;QD=12.67;ReadPosRankSum=1.333;VQSLOD=4.3505;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:34,0:34:71.46:321,71,0	1/1:8,0:8:21.96:98,22,0	0/0:15,1:15:12.39:0,12,186	0/0:10,0:9:14.95:0,15,123	1/1:17,0:17:22.22:105,22,0	0/0:28,0:28:65.94:0,66,569	0/0:26,0:26:68.98:0,69,599	1/1:25,0:25:41.23:187,41,0	1/1:27,0:27:60.43:270,60,0	1/1:13,9:21:1.02:239,1,0	1/1:9,6:15:18.05:199,18,0	0/0:19,0:19:50.49:0,50,442	1/1:7,16:23:4.02:273,4,0	1/1:8,15:24:24.91:483,25,0	1/1:4,18:22:48.13:531,48,0	1/1:23,0:23:52.15:233,52,0	1/1:31,0:31:60.38:270,60,0	1/1:23,0:23:57.73:259,58,0	1/1:15,1:25:31.72:197,32,0	1/1:13,17:30:5.29:423,5,0	1/1:10,19:31:53.94:565,54,0	0/0:18,1:19:14.81:0,15,357	0/1:19,2:21:15.26:15,0,340	0/0:29,1:30:44.77:0,45,610	1/1:7,14:21:36.10:398,36,0	0/1:15,11:26:35.98:311,0,36	1/1:10,22:34:66:703,66,0	1/1:5,6:12:17.88:180,18,0
chr10	58711990	.	G	GGGT	9268.52	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=-9.431;DP=617;FS=0.741;HRun=0;HaplotypeScore=113.0347;InbreedingCoeff=0.9071;MQ=69.21;MQ0=0;MQRankSum=-4.072;QD=42.71;ReadPosRankSum=3.513;VQSLOD=6.0218;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,33:34:78.26:1651,78,0	1/1:1,8:9:24.08:512,24,0	0/0:16,0:15:30.94:0,31,437	0/0:10,0:8:18.05:0,18,264	1/1:1,16:17:24.07:483,24,0	0/0:26,0:26:78.23:0,78,1210	0/0:25,0:25:72.24:0,72,1186	1/1:3,23:27:66.13:1211,66,0	1/1:0,29:29:66.23:1409,66,0	0/0:19,0:18:42.98:0,43,311	0/0:11,0:11:25.44:0,25,145	0/0:21,0:21:59.21:0,59,914	0/0:20,0:20:30.44:0,30,184	0/0:23,0:23:50.31:0,50,294	0/0:24,0:24:55.83:0,56,300	1/1:0,22:23:57.20:1216,57,0	1/1:2,30:32:65.81:1410,66,0	1/1:0,26:26:63.22:1333,63,0	0/1:20,0:20:44.50:44,0,94	0/0:27,0:27:65.23:0,65,421	0/0:28,0:28:42.92:0,43,324	0/0:17,0:17:47.90:0,48,765	0/0:20,0:20:56.64:0,57,831	0/0:32,0:32:66.52:0,67,1298	0/0:19,0:19:44.94:0,45,243	0/0:24,0:24:54.48:0,54,431	0/0:28,0:28:58.55:0,59,290	0/0:10,0:10:10.93:0,11,56
chr10	58713471	.	GCTGGT	G	1158.45	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.647;DP=741;FS=4.486;HRun=0;HaplotypeScore=132.1463;InbreedingCoeff=0.9993;MQ=81.33;MQ0=1;MQRankSum=-1.506;QD=46.34;ReadPosRankSum=2.556;VQSLOD=3.8508;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,147,4671	0/0:15,0:15:45.15:0,45,1449	0/0:15,0:15:39.50:0,40,1114	0/0:26,0:26:72.21:0,72,2076	0/0:18,0:18:42.14:0,42,1354	0/0:29,0:29:87.28:0,87,2738	0/0:38,0:38:99:0,114,3662	0/0:40,0:40:99:0,114,3484	1/1:3,22:24:57.20:1253,57,0	0/0:31,0:31:90.31:0,90,2866	0/0:15,0:15:45.15:0,45,1453	0/0:38,0:38:99:0,114,3640	0/0:27,0:27:78.27:0,78,2482	0/0:21,0:21:63.22:0,63,2033	0/0:25,0:25:75.26:0,75,2376	0/0:28,0:28:84.25:0,84,2447	0/0:29,0:29:84.29:0,84,2592	0/0:30,0:30:87.30:0,87,2760	0/0:21,0:21:63.22:0,63,1994	0/0:24,0:24:69.22:0,69,2140	0/0:41,0:41:99:0,120,3660	0/0:25,0:25:72.25:0,72,2319	0/0:15,0:15:42.14:0,42,1256	0/0:25,0:25:75.26:0,75,2370	0/0:27,0:27:75.26:0,75,2373	0/0:34,0:34:99:0,102,3203	0/0:19,0:19:54.19:0,54,1739	0/0:10,0:10:30.10:0,30,923
chr10	58714928	.	CAGAG	C	1644.15	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.364;DP=583;FS=11.807;HRun=0;HaplotypeScore=95.2481;InbreedingCoeff=0.9942;MQ=92.36;MQ0=0;MQRankSum=-1.868;QD=40.10;ReadPosRankSum=2.881;VQSLOD=3.2853;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,123,3199	0/0:9,0:9:24.08:0,24,634	0/0:33,0:33:84.24:0,84,2039	0/0:19,0:19:54.15:0,54,1253	0/0:12,0:12:36.11:0,36,886	0/0:14,0:14:42.14:0,42,1092	0/0:23,0:23:60.19:0,60,1510	0/0:27,0:27:69.22:0,69,1720	0/0:25,0:25:72.23:0,72,1777	0/0:26,0:26:75.24:0,75,1823	0/0:12,0:12:30.10:0,30,765	0/0:22,0:22:60.21:0,60,1523	0/0:22,0:22:63.20:0,63,1587	0/0:18,0:17:51.17:0,51,1283	0/0:24,0:24:63.19:0,63,1554	1/1:1,23:25:56.97:1048,57,0	0/0:34,0:34:96.33:0,96,2534	1/1:0,16:16:39.13:718,39,0	0/0:13,0:13:33.11:0,33,848	0/0:18,0:18:54.17:0,54,1356	0/0:35,0:35:87.28:0,87,2220	0/0:13,0:13:35.91:0,36,884	0/0:16,0:16:45.14:0,45,1101	0/0:23,0:23:60.21:0,60,1558	0/0:19,0:19:54.17:0,54,1363	0/0:18,0:18:42.10:0,42,1049	0/0:16,0:16:42.11:0,42,968	0/0:6,0:6:18.06:0,18,452
chr10	58715024	.	T	TACAC	3056.61	PASS	AB=0.694;AC=44;AF=0.846;AN=52;BaseQRankSum=1.246;DP=536;FS=19.350;HRun=0;HaplotypeScore=155.3540;InbreedingCoeff=0.1272;MQ=69.46;MQ0=9;MQRankSum=-1.006;QD=6.93;ReadPosRankSum=-1.444;VQSLOD=1.5542;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:41,0:41:8.89:96,9,0	1/1:4,0:8:3.01:52,3,0	./.	./.	1/1:15,0:14:3:25,3,0	0/1:7,9:18:30.52:194,0,31	1/1:25,3:29:20.50:316,21,0	1/1:20,0:20:3.45:22,3,0	0/0:11,0:16:12.71:0,13,153	1/1:21,0:21:11.86:150,12,0	1/1:9,0:9:2.84:14,3,0	0/1:13,5:21:34.54:108,0,35	1/1:16,0:16:5.91:103,6,0	1/1:16,0:15:6:75,6,0	1/1:11,0:11:3.01:45,3,0	0/0:18,0:19:21.06:0,21,286	1/1:16,1:17:15.04:258,15,0	1/1:19,0:18:6:74,6,0	1/1:17,0:17:9.02:137,9,0	1/1:12,0:11:2.83:50,3,0	1/1:19,0:18:2.94:24,3,0	1/1:9,5:15:2.75:70,3,0	0/1:10,5:16:17.44:207,0,17	0/1:18,9:31:24.91:199,0,25	1/1:19,0:19:8.96:95,9,0	1/1:27,0:25:36.12:554,36,0	1/1:18,0:19:15.05:275,15,0	1/1:4,0:4:3.90:54,4,0
chr10	58715066	.	C	CACACACACACAT	5895.37	PASS	AB=1.000;AC=30;AF=0.536;AN=56;BaseQRankSum=3.331;DP=650;FS=1.267;HRun=0;HaplotypeScore=239.5473;InbreedingCoeff=0.4895;MQ=60.67;MQ0=12;MQRankSum=-3.733;QD=14.74;ReadPosRankSum=-3.277;VQSLOD=3.2873;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:42,0:39:76.73:77,0,297	0/1:6,0:6:38.91:57,0,39	0/0:45,0:25:35.90:0,36,442	0/0:51,0:24:26.26:0,26,281	0/0:18,0:18:26.07:0,26,214	0/1:22,0:22:31.16:31,0,282	0/1:32,0:32:34.39:34,0,396	0/0:14,0:14:23.18:0,23,227	0/0:18,0:18:36.88:0,37,577	1/1:18,0:18:26.97:709,27,0	1/1:3,0:19:0.47:1,0,0	0/0:20,0:20:26.47:0,26,325	1/1:7,0:17:9.97:266,10,0	1/1:22,0:21:44.75:452,45,0	1/1:3,13:17:3.48:158,3,0	0/0:27,0:25:68.98:0,69,1098	0/1:24,0:24:99:123,0,271	0/1:21,0:21:99:347,0,262	1/1:18,0:18:51.16:542,51,0	1/1:19,0:19:30.41:248,30,0	1/1:30,0:30:52.67:376,53,0	0/0:14,0:14:22.97:0,23,180	0/0:13,0:14:27.43:0,27,299	0/0:29,0:28:38.36:0,38,357	1/1:22,0:22:25.41:263,25,0	1/1:33,0:31:83.11:1349,83,0	1/1:7,10:23:1.80:556,2,0	1/1:14,0:13:34.68:306,35,0
chr10	58718863	.	CAGAGAGAGAGAGAGAGAGAGAG	C	820.95	PASS	AB=0.895;AC=9;AF=0.180;AN=50;BaseQRankSum=4.048;DP=493;FS=12.896;HRun=0;HaplotypeScore=245.8583;InbreedingCoeff=0.5727;MQ=72.96;MQ0=4;MQRankSum=-3.314;QD=9.12;ReadPosRankSum=0.253;VQSLOD=1.2292;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:27:3.01:153,3,0	1/1:5,0:5:3.01:67,3,0	./.	./.	./.	0/0:14,0:15:21.07:0,21,721	0/0:16,0:16:15.04:0,15,534	0/0:24,0:24:9.02:0,9,150	0/0:15,0:15:12.04:0,12,729	0/0:21,0:21:21.07:0,21,1148	0/0:15,0:14:9.03:0,9,455	0/0:18,0:20:26.73:0,27,1238	0/0:11,0:11:17.97:0,18,962	0/0:14,0:14:15.05:0,15,1154	0/0:23,0:23:39.13:0,39,2169	0/1:15,0:17:15.84:178,0,16	1/1:21,5:26:6.01:248,6,0	1/1:10,0:14:3.07:302,3,0	0/0:17,0:17:20.08:0,20,719	0/0:17,0:17:15.05:0,15,960	0/0:23,0:23:21.54:0,22,1191	0/0:12,0:12:9.03:0,9,449	0/0:8,0:8:6.02:0,6,214	0/0:22,0:22:9.03:0,9,410	0/0:14,0:14:15.05:0,15,942	0/0:28,0:28:35.15:0,35,1692	0/0:17,0:17:18.06:0,18,1405	0/0:10,0:9:17.40:0,17,994
chr10	58719880	.	ACGAAGGAAGGGAGCGGCGCAAGCAGCTCC	A	1459.75	PASS	AB=0.712;AC=2;AF=0.036;AN=56;BaseQRankSum=4.808;DP=601;FS=1.469;HRun=0;HaplotypeScore=412.5592;InbreedingCoeff=-0.0375;MQ=84.13;MQ0=0;MQRankSum=-3.586;QD=33.95;ReadPosRankSum=2.363;VQSLOD=0.6567;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:63.19:0,63,6183	0/0:12,0:12:36.12:0,36,4521	0/0:22,0:22:57.02:0,57,2496	0/0:17,0:17:39.46:0,39,2222	0/0:14,0:14:36.11:0,36,2296	0/0:21,0:21:57.67:0,58,6274	0/0:37,0:37:99:0,108,11256	0/0:22,0:22:57.18:0,57,4009	0/0:23,0:23:69.23:0,69,7223	0/0:10,0:10:27.09:0,27,2543	0/0:18,0:18:51.16:0,51,2796	0/0:36,0:36:99:0,108,11959	0/0:35,0:35:99:0,105,10301	0/0:26,0:26:78.27:0,78,8663	0/0:25,0:25:72.24:0,72,8570	0/1:14,12:26:99:1340,0,366	0/0:29,0:29:87.30:0,87,9979	0/1:11,6:17:99:209,0,259	0/0:29,0:29:81.25:0,81,4650	0/0:9,0:9:24.08:0,24,2511	0/0:38,0:38:99:0,114,12447	0/0:13,0:13:36.08:0,36,3462	0/0:12,0:12:36.12:0,36,2692	0/0:22,0:22:63.22:0,63,7976	0/0:12,0:12:36.12:0,36,3069	0/0:22,0:22:66.22:0,66,5385	0/0:25,0:25:72.23:0,72,8745	0/0:6,0:6:18.04:0,18,2019
chr10	58720184	.	GC	G	2451.84	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=11.465;DP=816;FS=0.482;HRun=1;HaplotypeScore=78.0749;InbreedingCoeff=0.9706;MQ=79.41;MQ0=0;MQRankSum=-2.110;QD=36.59;ReadPosRankSum=0.635;VQSLOD=3.8112;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,144,2270	0/0:17,0:17:51.16:0,51,790	0/0:18,0:18:51.09:0,51,759	0/0:24,0:23:62.74:0,63,899	0/0:23,0:23:69.24:0,69,1091	0/0:33,0:33:99:0,99,1556	0/0:31,0:31:93.32:0,93,1484	0/0:31,0:31:93.30:0,93,1447	0/0:28,0:28:84.29:0,84,1342	0/0:27,0:27:81.27:0,81,1272	0/0:22,0:22:66.23:0,66,1055	0/0:41,0:41:99:0,123,1936	0/0:39,0:39:99:0,117,1855	0/0:21,0:21:63.21:0,63,993	0/0:38,0:38:99:0,111,1727	1/1:0,37:37:99:1483,108,0	0/0:36,0:36:99:0,105,1672	1/1:0,30:30:78.26:1090,78,0	0/0:21,0:21:63.18:0,63,942	0/0:30,0:30:87.27:0,87,1337	0/0:48,0:48:99:0,144,2277	0/0:27,0:27:78.25:0,78,1223	0/0:20,0:20:56.82:0,57,804	0/0:33,0:33:99:0,99,1582	0/0:26,0:26:78.24:0,78,1197	0/0:38,0:38:99:0,114,1758	0/0:26,0:26:78.22:0,78,1189	0/0:3,0:3:9:0,9,97
chr10	58720467	.	T	TTA	16437.80	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-14.160;DP=653;FS=0.935;HRun=0;HaplotypeScore=76.8641;InbreedingCoeff=0.9918;MQ=82.19;MQ0=0;MQRankSum=-3.248;QD=54.43;ReadPosRankSum=0.833;VQSLOD=5.0526;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:45.15:0,45,734	0/0:13,0:13:36.12:0,36,586	0/0:20,0:21:52.69:0,53,836	0/0:19,0:19:54.12:0,54,784	0/0:21,0:21:60.20:0,60,974	0/0:29,0:29:84.29:0,84,1356	0/0:12,0:12:33.11:0,33,538	0/0:23,0:23:63.18:0,63,936	0/0:24,0:24:72.23:0,72,1150	1/1:0,32:32:90.31:1811,90,0	1/1:0,26:26:78.27:1567,78,0	0/0:30,0:30:87.28:0,87,1394	1/1:4,19:23:66.21:1288,66,0	1/1:1,25:26:72.25:1463,72,0	1/1:0,14:16:36.12:731,36,0	0/0:26,0:26:78.25:0,78,1242	0/0:24,0:24:72.23:0,72,1150	0/0:19,0:19:57.19:0,57,930	1/1:2,16:20:60.16:1139,60,0	1/1:1,23:25:69.24:1389,69,0	1/1:1,21:24:54.19:1096,54,0	0/0:32,0:32:93.32:0,93,1508	0/0:22,0:22:60.20:0,60,977	0/0:20,0:20:57.19:0,57,927	1/1:1,26:28:75.26:1522,75,0	1/1:1,34:35:99:2011,99,0	1/1:2,38:41:99:2237,111,0	1/1:1,4:5:9.03:183,9,0
chr10	58724838	.	A	AGGAT	17031.36	PASS	AB=0.796;AC=38;AF=0.679;AN=56;BaseQRankSum=-10.495;DP=807;FS=1.313;HRun=0;HaplotypeScore=121.0277;InbreedingCoeff=0.8188;MQ=68.59;MQ0=3;MQRankSum=0.387;QD=29.06;ReadPosRankSum=-1.017;VQSLOD=4.3963;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:18,14:31:27.05:575,27,0	1/1:5,10:15:27.09:630,27,0	0/1:25,0:20:6.14:6,0,106	0/0:27,0:25:17.91:0,18,221	1/1:15,20:36:66.23:1477,66,0	0/0:28,0:28:51.10:0,51,705	0/0:30,0:30:23.83:0,24,712	1/1:34,0:34:26.98:404,27,0	1/1:5,13:19:30.10:713,30,0	1/1:11,20:31:63.21:1449,63,0	1/1:10,15:26:30.10:613,30,0	0/0:35,0:35:60.20:0,60,945	1/1:12,17:30:27.09:640,27,0	1/1:11,20:31:51.18:1210,51,0	1/1:17,1:31:42.14:710,42,0	1/1:7,22:30:51.18:1212,51,0	1/1:14,17:31:41.97:998,42,0	0/0:7,0:17:9.01:0,9,82	1/1:11,7:19:24.07:522,24,0	1/1:13,21:35:57.19:1197,57,0	1/1:17,17:36:36.12:855,36,0	0/0:21,0:21:42.14:0,42,661	0/0:37,0:37:66.20:0,66,975	0/0:26,0:26:48.15:0,48,733	1/1:16,22:38:54.19:1268,54,0	1/1:20,16:36:48.15:1055,48,0	1/1:11,22:35:3.88:1025,4,0	0/1:5,10:16:23.17:475,0,23
chr10	58727591	.	T	TA	9392.03	PASS	AB=0.556;AC=15;AF=0.268;AN=56;BaseQRankSum=-6.515;DP=838;FS=15.085;HRun=2;HaplotypeScore=82.2757;InbreedingCoeff=0.9173;MQ=83.26;MQ0=0;MQRankSum=-6.818;QD=38.02;ReadPosRankSum=4.159;VQSLOD=3.8100;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,63:65:99:2548,178,0	0/1:2,8:10:10.09:318,0,10	0/0:29,0:29:75.12:0,75,869	0/0:20,0:21:53.09:0,53,570	1/1:2,28:30:78.22:1099,78,0	0/0:24,0:24:72.21:0,72,879	0/0:42,0:42:99:0,117,1414	1/1:0,25:25:75.22:1027,75,0	1/1:1,31:32:90.30:1290,90,0	0/0:37,0:37:99:0,108,1306	0/0:13,0:13:36.11:0,36,446	0/0:23,0:23:66.18:0,66,792	0/0:24,0:24:66.16:0,66,779	0/0:33,0:33:96.26:0,96,1152	0/0:33,0:33:96.27:0,96,1154	1/1:0,20:20:51.17:734,51,0	1/1:1,40:41:99:1555,108,0	1/1:2,21:23:57.19:820,57,0	0/0:24,0:24:66.20:0,66,807	0/0:27,0:27:72.23:0,72,892	0/0:60,0:60:99:0,168,2041	0/0:33,0:33:99:0,99,1204	0/0:22,0:22:66.19:0,66,805	0/0:39,0:39:99:0,111,1333	0/0:29,0:29:78.24:0,78,967	0/0:35,0:35:99:0,99,1227	0/0:31,0:31:81.21:0,81,964	0/0:12,0:12:36.09:0,36,431
chr10	58729277	.	CTG	C	4470.25	PASS	AB=0.941;AC=21;AF=0.375;AN=56;BaseQRankSum=15.290;DP=792;FS=3.555;HRun=0;HaplotypeScore=124.4563;InbreedingCoeff=0.6240;MQ=69.16;MQ0=7;MQRankSum=2.536;QD=12.92;ReadPosRankSum=1.445;VQSLOD=4.9285;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:10,34:44:63.21:1032,63,0	1/1:5,9:14:27.08:320,27,0	0/0:50,0:27:29.85:0,30,320	0/0:43,0:30:18.47:0,18,363	1/1:5,17:22:36.11:429,36,0	0/0:26,1:27:29.18:0,29,903	0/1:24,2:26:11.34:11,0,780	1/1:18,17:35:9.73:503,10,0	1/1:7,0:25:31.25:154,31,0	0/0:35,1:35:84.28:0,84,1281	0/1:15,1:15:8.68:9,0,355	0/0:22,1:23:15.40:0,15,717	0/0:24,1:24:15.40:0,15,700	0/0:29,2:31:3.77:0,4,1001	0/0:29,0:30:60.19:0,60,933	1/1:7,25:31:63.16:736,63,0	1/1:11,29:40:53.99:835,54,0	1/1:6,11:17:31.36:390,31,0	0/1:23,2:22:38.44:38,0,387	0/0:26,1:26:10.29:0,10,783	0/1:35,4:40:11.51:12,0,1198	0/0:30,0:30:33.53:0,34,797	0/0:24,0:24:60.20:0,60,928	0/0:29,0:29:63.09:0,63,1002	0/0:23,1:24:33.46:0,33,983	0/0:22,2:24:15.40:0,15,722	0/0:22,0:22:57.19:0,57,904	0/1:9,0:9:1.37:1,0,307
chr10	58729432	.	T	TTGTGTGTGTGTGTG	3743.07	PASS	AB=0.897;AC=33;AF=0.611;AN=54;BaseQRankSum=1.983;DP=844;FS=11.890;HRun=0;HaplotypeScore=313.4614;InbreedingCoeff=0.6005;MQ=50.39;MQ0=30;MQRankSum=-5.530;QD=6.94;ReadPosRankSum=-6.991;VQSLOD=0.1269;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:56:40.42:0,40,1846	0/0:2,0:8:9.03:0,9,162	1/1:46,0:15:2.60:10,3,0	./.	0/0:20,0:21:2.75:0,3,769	0/0:23,0:27:59.96:0,60,1778	0/0:30,0:30:7.80:0,8,707	0/1:46,0:46:62.21:120,0,62	0/0:23,0:23:13.14:0,13,767	1/1:23,0:22:21.04:365,21,0	1/1:18,0:18:2.99:24,3,0	0/0:30,0:30:50.63:0,51,1361	1/1:23,0:19:11.07:176,11,0	1/1:31,0:29:5.94:70,6,0	1/1:33,0:31:15:256,15,0	1/1:19,15:38:8.24:293,8,0	0/1:30,0:40:21.65:22,0,972	1/1:25,0:24:32.77:514,33,0	1/1:31,0:27:28.90:316,29,0	1/1:20,0:19:9.01:152,9,0	1/1:43,0:39:9.03:194,9,0	0/1:15,0:16:20.10:20,0,616	0/0:11,0:11:18.06:0,18,531	0/0:43,0:44:69.11:0,69,2084	1/1:20,0:20:8.92:197,9,0	1/1:32,0:31:24.03:333,24,0	1/1:29,0:27:35.90:484,36,0	1/1:20,0:20:8.96:198,9,0
chr10	58730852	.	C	CT	509.05	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-4.194;DP=680;FS=3.242;HRun=6;HaplotypeScore=62.0219;InbreedingCoeff=0.9484;MQ=82.39;MQ0=0;MQRankSum=-2.513;QD=26.79;ReadPosRankSum=1.347;VQSLOD=4.2837;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,108,1094	0/0:8,0:8:24.05:0,24,245	0/0:18,0:18:9.71:0,10,310	0/0:20,0:20:57.06:0,57,557	0/0:33,0:33:90.19:0,90,911	0/0:27,1:28:43.44:0,43,758	0/0:27,0:27:69.15:0,69,704	0/0:42,0:42:96.18:0,96,966	1/1:3,16:19:48.15:604,48,0	0/0:26,1:27:69.13:0,69,692	0/0:30,0:30:81.18:0,81,826	0/0:34,0:34:90.18:0,90,911	0/0:24,0:24:69.12:0,69,689	0/0:28,0:28:81.17:0,81,820	0/0:34,0:34:96.20:0,96,972	0/0:27,0:27:75.17:0,75,765	0/0:26,0:26:75.17:0,75,764	0/0:19,0:19:51.12:0,51,520	0/0:22,0:22:54.11:0,54,546	0/0:22,0:22:54.12:0,54,551	0/0:19,0:19:54.12:0,54,551	0/0:15,0:15:42.08:0,42,422	0/0:15,0:15:42.09:0,42,429	0/0:19,0:19:57.13:0,57,582	0/0:20,0:20:54.08:0,54,535	0/0:24,0:24:66.15:0,66,674	0/0:27,0:26:78.14:0,78,786	0/0:12,0:12:24.05:0,24,245
chr10	58731886	.	TCTCTCC	T	5434.38	PASS	AB=1.000;AC=30;AF=0.536;AN=56;BaseQRankSum=5.690;DP=664;FS=7.985;HRun=0;HaplotypeScore=151.1061;InbreedingCoeff=0.5478;MQ=72.39;MQ0=24;MQRankSum=-1.521;QD=13.65;ReadPosRankSum=1.629;VQSLOD=3.0338;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:27:11.08:11,0,84	0/1:11,0:11:43.13:151,0,43	0/0:45,0:18:37.87:0,38,352	0/0:60,0:25:37.75:0,38,381	0/1:26,0:26:25.32:334,0,25	0/0:23,0:23:24.65:0,25,502	0/0:21,0:21:39.03:0,39,505	1/1:37,0:36:78.38:632,78,0	0/0:15,0:15:29.21:0,29,319	1/1:2,29:31:77.85:737,78,0	1/1:0,13:13:32.56:310,33,0	0/0:20,0:20:22.48:0,22,518	1/1:0,20:20:6.02:135,6,0	1/1:1,21:22:15.05:343,15,0	1/1:1,17:18:12.04:269,12,0	0/0:23,0:23:14.64:0,15,84	0/1:21,0:21:99:203,0,128	0/1:25,0:25:99:244,0,399	0/1:18,0:17:14.66:278,0,15	1/1:28,0:28:33.26:263,33,0	1/1:27,0:26:46.85:423,47,0	0/0:24,0:24:45.58:0,46,401	0/0:13,0:13:23.93:0,24,250	0/0:22,0:21:42.02:0,42,495	1/1:2,21:23:11.72:200,12,0	1/1:4,15:17:36:396,36,0	1/1:16,0:14:17.83:126,18,0	1/1:16,0:16:47.84:380,48,0
chr10	58731888	.	TCTCC	T	5593.81	PASS	AB=1.000;AC=37;AF=0.661;AN=56;BaseQRankSum=6.151;DP=665;FS=22.135;HRun=0;HaplotypeScore=134.6556;InbreedingCoeff=0.6819;MQ=70.89;MQ0=25;MQRankSum=-2.774;QD=12.51;ReadPosRankSum=-0.301;VQSLOD=2.8225;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:27:11.17:11,0,32	1/1:11,0:11:27.12:204,27,0	0/0:44,0:17:37.87:0,38,352	0/0:59,0:24:42.54:0,43,391	1/1:25,0:25:14.22:391,14,0	0/1:24,0:24:11.89:12,0,399	0/0:20,0:20:24.44:0,24,424	1/1:38,0:37:97.84:757,98,0	0/0:15,0:15:29.19:0,29,277	1/1:32,0:31:59.49:551,59,0	1/1:13,0:13:32.50:234,32,0	0/0:20,0:20:22.41:0,22,414	1/1:20,0:20:6.02:72,6,0	1/1:22,0:22:15.05:183,15,0	1/1:17,0:17:11.92:141,12,0	1/1:23,0:23:13.42:60,13,0	1/1:22,0:22:11.90:246,12,0	0/1:25,0:25:99:246,0,199	1/1:17,0:16:30.16:347,30,0	1/1:3,25:28:33.52:341,34,0	1/1:27,1:27:67.16:586,67,0	0/0:26,0:26:0.91:0,1,316	0/0:13,0:13:6.94:0,7,206	0/0:21,0:20:42.01:0,42,447	1/1:23,0:22:12.90:146,13,0	1/1:18,0:16:35.91:305,36,0	1/1:2,14:14:18.06:338,18,0	1/1:18,0:18:53.79:423,54,0
chr10	58731890	.	TCC	T	5911.62	PASS	AB=1.000;AC=40;AF=0.714;AN=56;BaseQRankSum=5.168;DP=664;FS=31.969;HRun=3;HaplotypeScore=117.7484;InbreedingCoeff=0.6216;MQ=69.30;MQ0=28;MQRankSum=-2.536;QD=12.21;ReadPosRankSum=-0.781;VQSLOD=0.2159;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:29:12.83:93,13,0	1/1:11,0:11:29.24:218,29,0	0/0:43,0:16:37.87:0,38,352	0/0:58,0:23:41.39:0,41,387	1/1:25,0:25:45.42:456,45,0	0/1:24,0:24:33.13:33,0,290	0/0:20,0:20:24.38:0,24,368	1/1:34,0:33:97.57:779,98,0	0/0:16,0:16:29.14:0,29,248	1/1:30,0:29:69.38:563,69,0	1/1:13,0:13:32.44:206,32,0	0/0:20,0:20:12.99:0,13,295	1/1:20,0:20:5.96:43,6,0	1/1:21,0:21:14.94:113,15,0	1/1:17,0:17:11.91:85,12,0	1/1:0,22:22:18.51:273,19,0	1/1:22,0:22:59.20:454,59,0	0/1:25,0:25:20.54:335,0,21	1/1:19,0:18:50.96:467,51,0	1/1:27,0:27:33.45:279,33,0	1/1:27,0:26:67.12:536,67,0	0/1:27,0:27:16.02:16,0,314	0/1:16,0:15:12.10:12,0,196	0/0:23,0:20:42:0,42,397	1/1:23,0:22:11.94:81,12,0	1/1:17,0:15:35.93:296,36,0	1/1:16,0:14:17.97:148,18,0	1/1:19,0:18:53.79:423,54,0
chr10	58731892	.	C	CCT	682.01	PASS	AB=1.000;AC=31;AF=0.574;AN=54;BaseQRankSum=-5.552;DP=689;FS=5.972;HRun=0;HaplotypeScore=146.7184;InbreedingCoeff=0.4050;MQ=65.55;MQ0=36;MQRankSum=1.787;QD=1.59;ReadPosRankSum=-2.878;VQSLOD=1.5436;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:30:13.22:104,13,0	1/1:12,0:12:2.51:7,3,0	./.	0/0:56,0:21:0:0,0,0	1/1:27,0:26:2.96:7,3,0	1/1:25,0:25:13.71:107,14,0	0/1:20,0:20:34.65:35,0,36	1/1:39,0:38:2.97:21,3,0	1/1:10,7:17:6.02:75,6,0	0/1:30,0:29:10.38:10,0,45	0/0:13,0:13:5.60:0,6,26	1/1:14,2:22:4.55:68,5,0	0/0:21,0:21:5.02:0,5,20	0/0:22,0:22:13.90:0,14,63	0/0:18,0:18:11.08:0,11,52	0/0:22,0:22:16.55:0,17,68	1/1:23,0:22:17.24:124,17,0	0/0:26,0:25:16.93:0,17,111	1/1:20,0:19:6.44:49,6,0	0/1:26,0:26:6.49:18,0,6	0/1:29,0:26:6.68:19,0,7	1/1:27,0:27:4.60:43,5,0	1/1:15,0:14:2.69:42,3,0	1/1:17,8:22:3.48:45,3,0	0/0:24,0:23:9.05:0,9,49	1/1:19,0:17:1.86:75,2,0	0/0:18,0:16:16.50:0,16,74	0/1:22,0:18:0.04:0,0,0
chr10	58732047	.	GT	G	5050.96	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=11.503;DP=614;FS=1.996;HRun=4;HaplotypeScore=65.2568;InbreedingCoeff=0.9996;MQ=79.63;MQ0=0;MQRankSum=-1.172;QD=33.90;ReadPosRankSum=0.342;VQSLOD=5.4022;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,25:25:75.23:899,75,0	1/1:0,16:16:48.15:576,48,0	0/0:18,0:18:45.13:0,45,597	0/0:25,0:24:24.87:0,25,497	1/1:0,29:29:84.26:1008,84,0	0/0:23,0:23:69.23:0,69,965	0/0:22,0:22:63.21:0,63,882	1/1:2,26:28:75.20:876,75,0	0/0:20,0:20:54.17:0,54,736	0/0:26,0:26:75.25:0,75,1048	0/0:13,0:13:39.12:0,39,529	0/0:20,0:20:51.17:0,51,714	0/0:30,0:30:90.30:0,90,1259	0/0:29,0:29:84.26:0,84,1143	0/0:20,0:20:57.19:0,57,798	1/1:0,22:22:57.17:684,57,0	1/1:1,11:12:33.10:396,33,0	1/1:0,17:17:51.16:612,51,0	0/0:20,0:20:57.18:0,57,782	0/0:25,0:25:75.25:0,75,1046	0/0:29,0:28:84.27:0,84,1160	0/0:22,0:22:66.21:0,66,901	0/0:17,0:17:48.11:0,48,634	0/0:19,0:19:54.17:0,54,740	0/0:23,0:23:69.21:0,69,946	0/0:18,0:18:54.17:0,54,727	0/0:33,0:32:96.32:0,96,1339	0/0:13,0:13:39.13:0,39,546
chr10	58733873	.	TAAGC	T	1040.47	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.675;DP=719;FS=1.822;HRun=0;HaplotypeScore=110.4100;InbreedingCoeff=0.9992;MQ=80.13;MQ0=0;MQRankSum=-2.674;QD=43.35;ReadPosRankSum=0.497;VQSLOD=4.2679;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:93.32:0,93,2463	0/0:11,0:11:30.10:0,30,807	0/0:22,0:22:51.17:0,51,1290	0/0:15,0:14:36.11:0,36,911	0/0:27,0:27:81.28:0,81,2151	0/0:17,0:17:48.16:0,48,1296	0/0:30,0:30:90.29:0,90,2225	0/0:34,0:34:96.33:0,96,2532	1/1:0,24:24:60.21:1135,60,0	0/0:34,0:34:99:0,102,2713	0/0:15,0:15:39.12:0,39,997	0/0:32,0:32:93.32:0,93,2511	0/0:27,0:27:81.28:0,81,2161	0/0:19,0:19:54.19:0,54,1419	0/0:30,0:30:87.28:0,87,2291	0/0:28,0:28:81.26:0,81,2129	0/0:36,0:36:99:0,108,2841	0/0:22,0:22:63.22:0,63,1694	0/0:19,0:19:57.20:0,57,1500	0/0:24,0:24:72.25:0,72,1939	0/0:31,0:31:93.32:0,93,2450	0/0:25,0:25:75.26:0,75,1979	0/0:20,0:20:57.20:0,57,1497	0/0:36,0:36:99:0,105,2792	0/0:22,0:22:63.22:0,63,1700	0/0:38,0:38:99:0,114,2971	0/0:37,0:37:99:0,111,2935	0/0:12,0:12:36.10:0,36,838
chr10	58734947	.	A	AGT	2043.65	PASS	AB=0.746;AC=35;AF=0.673;AN=52;BaseQRankSum=0.267;DP=548;FS=0.796;HRun=0;HaplotypeScore=94.7679;InbreedingCoeff=0.3814;MQ=60.15;MQ0=15;MQRankSum=-1.542;QD=5.25;ReadPosRankSum=-0.935;VQSLOD=2.9324;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:20:14.21:106,14,0	1/1:6,0:9:5.81:52,6,0	./.	./.	1/1:16,0:16:3:27,3,0	0/0:21,0:22:11.86:0,12,112	0/0:20,0:22:14.70:0,15,126	1/1:24,0:24:6:54,6,0	1/1:9,4:12:6.02:89,6,0	1/1:14,6:19:15.05:223,15,0	0/1:8,7:15:36.84:199,0,37	0/0:12,0:12:15.04:0,15,163	0/1:14,3:19:26.61:39,0,27	1/1:10,4:14:9.03:134,9,0	1/1:12,2:17:3.01:45,3,0	1/1:6,0:9:3:26,3,0	1/1:29,0:29:20.97:222,21,0	1/1:19,0:19:5.85:44,6,0	1/1:19,0:18:8.94:89,9,0	1/1:15,6:22:9.03:134,9,0	0/1:16,6:22:23.59:79,0,24	0/0:15,0:18:17.88:0,18,176	0/0:10,0:14:11.70:0,12,93	0/0:21,0:23:17.71:0,18,158	0/1:17,6:22:20.59:122,0,21	1/1:29,0:28:24.45:224,24,0	0/1:19,11:31:47.22:142,0,47	1/1:14,0:14:15.03:169,15,0
chr10	58735520	.	GA	G	4525.90	PASS	AB=0.938;AC=25;AF=0.446;AN=56;BaseQRankSum=13.506;DP=510;FS=0.784;HRun=8;HaplotypeScore=67.2772;InbreedingCoeff=0.9264;MQ=58.23;MQ0=17;MQRankSum=-8.065;QD=20.86;ReadPosRankSum=1.455;VQSLOD=4.8722;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:90.25:0,90,1063	0/0:7,0:7:15.05:0,15,181	0/1:14,1:10:0.94:1,0,242	0/0:13,0:12:26.85:0,27,277	0/0:29,0:28:69.17:0,69,817	0/0:16,0:16:42.13:0,42,507	0/0:19,0:17:51.15:0,51,606	0/0:32,0:32:91.79:0,92,1073	0/0:11,0:9:3.57:0,4,266	1/1:3,16:19:51.08:492,51,0	1/1:1,12:12:36.06:347,36,0	0/0:14,0:14:39.12:0,39,471	1/1:0,7:7:21.03:203,21,0	1/1:4,11:14:30.05:290,30,0	1/1:0,18:17:42.07:405,42,0	0/0:17,0:17:42.13:0,42,507	0/0:33,0:31:60.18:0,60,725	0/0:24,0:24:47.75:0,48,578	1/1:5,20:23:57.06:542,57,0	1/1:3,12:14:36.06:347,36,0	1/1:1,12:13:26.98:250,27,0	0/0:17,0:16:39.12:0,39,469	0/0:16,0:16:42.13:0,42,507	0/0:12,0:12:30.09:0,30,362	1/1:5,24:29:66.10:637,66,0	1/1:5,17:20:51.08:492,51,0	1/1:4,17:20:45.05:434,45,0	1/1:1,4:5:9.01:87,9,0
chr10	58737567	.	T	TA	8291.43	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-18.052;DP=683;FS=1.314;HRun=8;HaplotypeScore=85.9832;InbreedingCoeff=0.9722;MQ=68.13;MQ0=0;MQRankSum=1.053;QD=27.19;ReadPosRankSum=3.650;VQSLOD=5.1829;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,113,960	0/0:10,0:10:26.10:0,26,211	0/0:12,1:13:2.72:0,3,180	0/0:7,0:7:14.97:0,15,128	0/0:38,0:38:98.73:0,99,871	0/0:21,0:21:54.03:0,54,494	0/0:18,0:18:47.93:0,48,421	0/0:38,0:38:99:0,106,897	0/0:23,0:23:60:0,60,542	1/1:3,28:31:81.12:909,81,0	1/1:3,24:27:68.95:733,69,0	0/0:26,0:26:66.03:0,66,604	1/1:2,16:18:48.11:542,48,0	1/1:1,23:24:57.17:660,57,0	1/1:3,23:26:35.91:667,36,0	0/0:22,0:22:61.87:0,62,524	0/0:30,0:30:87.03:0,87,791	0/0:23,0:23:65.66:0,66,576	1/1:3,18:21:57.09:612,57,0	1/1:2,28:30:36.17:792,36,0	1/1:5,17:22:36.11:417,36,0	0/0:18,0:18:48.01:0,48,435	0/0:26,0:26:66.01:0,66,603	0/0:23,0:23:62.99:0,63,562	1/1:5,32:37:78.23:903,78,0	1/1:5,21:26:63.19:729,63,0	1/1:3,27:30:53.88:876,54,0	1/1:0,13:13:39.12:451,39,0
chr10	58738084	.	CT	C	3625.53	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=4.113;DP=475;FS=0.000;HRun=6;HaplotypeScore=55.6240;InbreedingCoeff=0.9916;MQ=72.32;MQ0=0;MQRankSum=0.046;QD=28.77;ReadPosRankSum=2.268;VQSLOD=4.2310;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,19:20:57.09:598,57,0	1/1:0,11:11:30.08:322,30,0	0/0:15,1:16:18.09:0,18,408	0/0:16,0:15:32.59:0,33,385	1/1:0,13:13:36.09:387,36,0	0/0:20,0:20:53.37:0,53,709	0/0:12,0:12:36.08:0,36,419	1/1:0,17:17:51.11:540,51,0	0/0:20,0:20:57.18:0,57,735	0/0:13,0:13:30.08:0,30,372	0/0:6,0:6:12.04:0,12,158	0/0:25,0:25:74.44:0,74,940	0/0:14,0:14:39.13:0,39,513	0/0:16,0:16:45.14:0,45,580	0/0:26,0:26:78.24:0,78,1011	1/1:2,21:23:63.16:676,63,0	1/1:1,26:27:74:779,74,0	1/1:1,14:15:30.08:322,30,0	0/0:19,0:19:51.17:0,51,671	0/0:14,0:14:39.08:0,39,493	0/0:27,0:27:69.70:0,70,908	0/0:15,0:15:45.15:0,45,590	0/0:9,0:9:27.05:0,27,335	0/0:24,0:24:69.21:0,69,894	0/0:12,0:12:36.12:0,36,473	0/0:16,0:16:39.11:0,39,487	0/0:22,0:22:66.20:0,66,841	0/0:7,0:7:21.07:0,21,276
chr10	58739441	.	ATT	A	14999.47	PASS	AB=1.000;AC=39;AF=0.696;AN=56;BaseQRankSum=11.367;DP=721;FS=2.222;HRun=9;HaplotypeScore=93.1700;InbreedingCoeff=0.9244;MQ=71.25;MQ0=3;MQRankSum=-2.483;QD=28.52;ReadPosRankSum=3.932;VQSLOD=5.0742;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,36:42:99:1188,102,0	1/1:0,13:13:39.12:455,39,0	0/1:18,0:16:6.84:7,0,327	0/0:20,0:19:11.27:0,11,349	1/1:4,22:25:66.19:763,66,0	0/0:21,0:21:63.14:0,63,976	0/0:21,0:21:60.12:0,60,880	1/1:1,25:26:75.22:874,75,0	0/0:35,0:35:99:0,99,1551	1/1:5,28:33:84.24:979,84,0	1/1:3,23:26:63.17:734,63,0	0/0:24,0:25:71.72:0,72,1117	1/1:1,24:25:63.19:734,63,0	1/1:2,20:22:57.17:664,57,0	1/1:0,32:31:81.24:944,81,0	1/1:1,20:21:54.16:629,54,0	1/1:1,32:33:90.26:1049,90,0	1/1:4,14:18:39.10:454,39,0	1/1:2,14:17:44.86:501,45,0	1/1:6,37:43:93.24:1084,93,0	1/1:3,31:34:84.24:979,84,0	0/0:27,0:28:80.76:0,81,1289	0/0:24,0:24:69.22:0,69,1100	0/0:21,0:21:57.19:0,57,935	1/1:2,21:23:60.17:699,60,0	1/1:5,23:28:69.18:794,69,0	1/1:2,30:32:90.26:1049,90,0	1/1:1,13:13:36.11:420,36,0
chr10	58741473	.	CGTGT	C	1176.44	PASS	AB=0.922;AC=20;AF=0.400;AN=50;BaseQRankSum=1.734;DP=733;FS=5.258;HRun=0;HaplotypeScore=126.8159;InbreedingCoeff=0.0435;MQ=67.53;MQ0=7;MQRankSum=0.112;QD=2.75;ReadPosRankSum=2.318;VQSLOD=1.7344;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:33.10:0,33,599	0/0:4,0:8:4.83:0,5,44	./.	0/1:25,0:17:0:0,0,0	./.	0/0:17,0:17:8.80:0,9,79	0/1:28,0:28:31.16:31,0,113	0/0:27,0:26:2.97:0,3,20	1/1:19,0:23:6.48:56,6,0	0/0:25,0:24:5.96:0,6,45	0/1:11,2:13:21.70:38,0,22	0/0:22,0:21:5.03:0,5,18	0/1:13,1:16:10.36:64,0,10	1/1:33,8:43:14.77:194,15,0	0/1:28,7:37:0.09:263,0,0	0/1:27,0:32:23.98:68,0,24	0/0:24,0:35:16.51:0,17,286	0/1:27,0:26:10.31:22,0,10	./.	0/1:26,2:28:0.89:175,0,1	0/1:47,1:48:28.47:38,0,28	0/1:25,2:27:22.52:37,0,23	0/1:12,1:14:31.45:88,0,31	0/0:25,0:34:11.74:0,12,125	1/1:24,1:26:14.07:166,14,0	0/1:24,0:24:2.89:3,0,35	0/0:32,0:31:3.15:0,3,68	1/1:14,1:15:8.61:84,9,0
chr10	58742276	.	CT	C	8136	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=13.198;DP=671;FS=18.694;HRun=4;HaplotypeScore=88.2068;InbreedingCoeff=0.9767;MQ=89.27;MQ0=1;MQRankSum=-1.931;QD=31.66;ReadPosRankSum=2.466;VQSLOD=3.1983;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,157,2165	0/0:8,0:8:24.08:0,24,336	0/0:18,0:18:6.07:0,6,365	0/0:51,1:46:64.56:0,65,1101	0/0:14,0:14:39.12:0,39,531	0/0:19,0:19:54.17:0,54,739	0/0:22,0:22:63.19:0,63,864	0/0:30,0:30:87.28:0,87,1188	0/0:29,0:29:84.27:0,84,1158	1/1:4,16:20:48.13:564,48,0	1/1:0,9:9:24.07:288,24,0	0/0:25,0:25:69.20:0,69,918	1/1:1,28:29:81.25:971,81,0	1/1:1,32:33:84.26:1008,84,0	1/1:3,32:35:93.28:1116,93,0	0/0:30,0:30:81.27:0,81,1134	0/0:39,0:39:99:0,108,1457	0/0:11,0:11:33.11:0,33,462	1/1:0,17:17:51.15:602,51,0	1/1:0,17:17:48.15:576,48,0	1/1:1,32:33:84.26:1008,84,0	0/0:15,0:15:45.15:0,45,630	0/0:16,0:16:39.12:0,39,529	0/0:31,0:31:93.30:0,93,1286	1/1:2,10:12:27.08:324,27,0	1/1:2,22:24:66.19:780,66,0	1/1:2,23:25:66.20:791,66,0	1/1:0,3:3:9.03:108,9,0
chr10	58744842	.	AAG	A	275.28	PASS	AB=0.979;AC=15;AF=0.375;AN=40;BaseQRankSum=1.644;DP=288;FS=4.750;HRun=0;HaplotypeScore=54.8119;InbreedingCoeff=-0.3354;MQ=51.42;MQ0=26;MQRankSum=-1.671;QD=1.16;ReadPosRankSum=3.422;VQSLOD=1.0196;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:20:27.34:34,0,27	0/1:5,0:5:4.08:4,0,12	0/1:16,0:6:3.44:12,0,3	0/0:13,0:4:2.44:0,2,5	0/1:23,0:20:55.38:55,0,56	0/1:9,2:11:29.71:30,0,59	0/1:24,0:22:4.90:5,0,155	0/0:19,0:17:19.69:0,20,118	0/1:16,0:16:1.48:1,0,52	./.	0/0:1,0:1:3:0,3,26	0/1:16,0:15:6.34:6,0,44	./.	./.	./.	0/1:12,1:12:30.73:47,0,31	0/1:25,0:24:47.84:48,0,96	0/1:18,0:15:60.36:73,0,60	0/0:3,0:1:3:0,3,26	./.	./.	0/1:12,0:12:0.69:1,0,155	0/1:19,1:19:17.94:18,0,158	1/1:16,0:12:12.72:59,13,0	0/0:1,0:1:3.01:0,3,31	./.	./.	0/0:4,0:1:2.99:0,3,23
chr10	58745817	.	C	CCCTCT	474.37	PASS	AC=20;AF=0.909;AN=22;BaseQRankSum=-0.744;DP=35;FS=0.000;HRun=0;HaplotypeScore=14.5879;InbreedingCoeff=0.0928;MQ=39.74;MQ0=1;MQRankSum=1.488;QD=19.77;ReadPosRankSum=-1.736;VQSLOD=2.5597;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	1/1:1,0:1:3.01:59,3,0	./.	0/0:2,0:1:2.88:0,3,15	1/1:1,1:5:2.97:20,3,0	./.	./.	1/1:1,0:1:3.01:79,3,0	1/1:4,0:4:8.99:146,9,0	./.	./.	./.	1/1:2,0:2:3.01:40,3,0	./.	./.	1/1:3,0:3:5.98:60,6,0	1/1:3,0:3:3.01:46,3,0	1/1:3,0:3:3.01:42,3,0	./.	./.	./.	./.	./.	1/1:1,0:1:3.01:39,3,0	./.	./.	./.	1/1:1,0:1:2.99:24,3,0
chr10	58747366	.	T	TA	7209.94	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-0.254;DP=611;FS=4.297;HRun=8;HaplotypeScore=67.2846;InbreedingCoeff=0.9893;MQ=80.03;MQ0=0;MQRankSum=-1.085;QD=28.50;ReadPosRankSum=1.940;VQSLOD=5.3824;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:93.03:0,93,847	0/0:12,0:12:35.99:0,36,323	0/0:16,0:15:10.66:0,11,177	0/0:20,0:18:16.43:0,16,174	0/0:31,0:31:72.03:0,72,659	0/0:19,0:19:54.03:0,54,494	0/0:18,0:18:45:0,45,406	0/0:32,0:33:89.07:0,89,799	0/0:15,0:15:42.02:0,42,384	1/1:2,18:21:54.16:622,54,0	1/1:3,27:30:78.23:898,78,0	0/0:23,0:23:60:0,60,540	1/1:1,22:23:60.17:683,60,0	1/1:2,10:12:30.09:346,30,0	1/1:2,14:16:36.11:416,36,0	0/0:29,0:29:78.01:0,78,705	0/0:24,0:24:66.03:0,66,604	0/0:27,0:27:71.57:0,72,659	1/1:3,24:27:72.21:831,72,0	1/1:9,30:39:93.16:1023,93,0	1/1:0,8:8:24.07:277,24,0	0/0:21,0:21:51.02:0,51,467	0/0:23,0:23:63.01:0,63,572	0/0:13,0:14:41.04:0,41,358	1/1:2,24:26:41.78:734,42,0	1/1:3,25:28:75.21:855,75,0	1/1:2,15:17:33.10:381,33,0	1/1:2,4:6:13.85:144,14,0
chr10	58747873	.	GAC	G	13829.90	PASS	AB=0.933;AC=25;AF=0.446;AN=56;BaseQRankSum=22.807;DP=893;FS=1.772;HRun=0;HaplotypeScore=142.4303;InbreedingCoeff=0.9409;MQ=58.64;MQ0=2;MQRankSum=-1.847;QD=37.18;ReadPosRankSum=2.336;VQSLOD=6.3202;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:57:99:0,169,3121	0/1:13,1:14:3.77:4,0,709	0/0:34,0:24:69.20:0,69,1242	0/0:37,0:26:75.23:0,75,1339	0/0:27,0:27:81.28:0,81,1563	0/0:21,0:21:63.22:0,63,1216	0/0:36,0:36:99:0,108,1991	0/0:23,0:23:69.24:0,69,1299	0/0:31,0:31:93.31:0,93,1762	1/1:0,31:31:93.21:1328,93,0	1/1:0,21:21:60.20:907,60,0	0/0:27,0:27:78.27:0,78,1483	1/1:1,35:35:86.97:1329,87,0	1/1:2,26:28:63.21:963,63,0	1/1:1,39:40:81.47:1535,81,0	0/0:44,0:44:99:0,129,2457	0/0:39,0:39:99:0,114,2129	0/0:36,0:36:99:0,105,2008	1/1:1,21:21:60.17:825,60,0	1/1:1,28:28:69.17:1027,69,0	1/1:3,40:43:99:1624,108,0	0/0:35,0:35:99:0,105,1909	0/0:32,0:32:96.31:0,96,1793	0/0:42,0:42:99:0,123,2306	1/1:1,29:30:81.28:1239,81,0	1/1:0,36:36:99:1582,105,0	1/1:0,34:35:86.99:1327,87,0	1/1:0,7:7:9.03:138,9,0
chr10	58751751	.	TC	T	11383.79	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=18.465;DP=786;FS=7.508;HRun=2;HaplotypeScore=98.4204;InbreedingCoeff=0.9978;MQ=82.86;MQ0=0;MQRankSum=-2.060;QD=35.80;ReadPosRankSum=2.103;VQSLOD=4.9308;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:44,1:45:99:0,132,1881	0/0:13,0:13:39.13:0,39,584	0/0:20,0:20:41.82:0,42,528	0/0:23,0:23:66.13:0,66,853	0/0:18,0:18:51.17:0,51,763	0/0:27,0:27:81.26:0,81,1193	0/0:34,0:34:99:0,99,1451	0/0:26,0:26:75.19:0,75,1058	0/0:19,0:19:54.18:0,54,808	1/1:0,32:32:96.31:1244,96,0	1/1:1,19:20:54.18:701,54,0	0/0:27,0:27:81.26:0,81,1191	1/1:1,15:16:38.81:483,39,0	1/1:1,24:25:66.21:856,66,0	1/1:2,17:19:51.17:662,51,0	0/0:21,0:21:63.20:0,63,923	0/0:53,0:53:99:0,160,2361	0/0:44,0:44:99:0,132,1946	1/1:0,25:25:75.23:960,75,0	1/1:0,28:28:84.27:1090,84,0	1/1:0,46:46:99:1596,123,0	0/0:20,0:20:60.18:0,60,858	0/0:23,0:23:69.23:0,69,1023	0/0:55,0:55:99:0,166,2467	1/1:3,30:33:90.21:1140,90,0	1/1:0,36:36:99:1332,105,0	1/1:0,31:31:87.28:1125,87,0	1/1:2,5:7:15.05:195,15,0
chr10	58752686	.	CAA	C	7702.92	PASS	AB=0.889;AC=25;AF=0.446;AN=56;BaseQRankSum=-0.832;DP=749;FS=7.516;HRun=12;HaplotypeScore=108.6798;InbreedingCoeff=0.9535;MQ=75.16;MQ0=1;MQRankSum=-1.207;QD=21.88;ReadPosRankSum=6.396;VQSLOD=3.8150;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:40:90.03:0,90,871	0/0:3,0:13:27.05:0,27,288	0/1:21,1:23:2.29:2,0,261	0/0:16,0:14:26.87:0,27,296	0/0:8,0:42:96.02:0,96,881	0/0:31,0:30:51.71:0,52,965	0/0:24,0:24:65.84:0,66,905	0/0:7,0:25:55.02:0,55,513	0/0:10,0:27:23.96:0,24,232	1/1:4,30:36:86.60:841,87,0	1/1:2,18:20:51.08:519,51,0	0/0:23,0:23:69.17:0,69,946	1/1:2,23:25:59.93:607,60,0	1/1:2,23:26:56.83:561,57,0	1/1:8,34:42:90.17:916,90,0	0/0:11,0:38:84.12:0,84,858	0/0:8,0:18:24.02:0,24,238	0/0:3,0:16:36.05:0,36,356	1/1:7,24:31:78.10:779,78,0	1/1:4,21:26:65.84:649,66,0	1/1:3,21:24:48.10:488,48,0	0/0:24,0:27:58.83:0,59,843	0/0:22,0:25:71.69:0,72,949	0/0:32,0:32:90.28:0,90,1289	1/1:2,23:25:53.70:529,54,0	1/1:5,25:30:72.09:725,72,0	1/1:3,29:32:75.12:763,75,0	1/1:0,11:11:33.04:326,33,0
chr10	58754284	.	CCA	C	9995.88	PASS	AB=0.978;AC=42;AF=0.750;AN=56;BaseQRankSum=11.451;DP=607;FS=0.000;HRun=0;HaplotypeScore=121.1397;InbreedingCoeff=0.7772;MQ=72.38;MQ0=2;MQRankSum=2.387;QD=21.92;ReadPosRankSum=2.281;VQSLOD=4.8375;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,25:34:66.21:811,66,0	1/1:5,0:5:6.01:63,6,0	0/0:32,0:21:21.61:0,22,267	0/1:28,0:21:5.70:6,0,111	1/1:7,12:19:26.99:297,27,0	0/0:14,1:15:2.25:0,2,542	0/0:45,2:47:43.59:0,44,1683	1/1:15,9:24:27:308,27,0	1/1:13,0:12:13.44:38,13,0	1/1:8,27:35:92.44:1078,92,0	1/1:4,8:12:27.03:332,27,0	0/1:21,1:22:5.26:5,0,694	1/1:10,15:25:63.06:722,63,0	1/1:7,21:29:80.95:934,81,0	1/1:8,16:24:60.10:703,60,0	1/1:4,15:19:29.22:367,29,0	1/1:6,26:32:72.23:886,72,0	1/1:1,15:16:39.12:479,39,0	1/1:4,6:10:24.07:285,24,0	1/1:7,7:14:27.08:329,27,0	1/1:8,14:22:45.14:542,45,0	0/0:20,0:20:45.15:0,45,728	0/0:14,0:14:36.11:0,36,552	0/0:23,0:23:42.14:0,42,681	1/1:9,7:17:35.90:403,36,0	1/1:14,15:30:62.94:707,63,0	1/1:5,17:22:51.16:627,51,0	1/1:1,3:4:6.02:74,6,0
chr10	58754285	.	CA	C	1772.14	PASS	AB=0.976;AC=25;AF=0.446;AN=56;BaseQRankSum=15.670;DP=601;FS=6.804;HRun=1;HaplotypeScore=136.0626;InbreedingCoeff=-0.0815;MQ=71.09;MQ0=2;MQRankSum=-2.973;QD=4.45;ReadPosRankSum=9.112;VQSLOD=-0.0892;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:32,2:34:99:105,0,103	0/1:4,0:4:20.39:26,0,20	0/0:33,0:21:49.63:0,50,504	0/0:27,0:19:45.80:0,46,405	0/1:18,0:18:54.82:63,0,55	0/0:16,0:16:39.58:0,40,587	0/0:47,0:47:99:0,121,1782	0/1:21,0:21:71.23:71,0,80	1/1:1,12:12:23.87:328,24,0	0/1:35,0:35:7.74:189,0,8	0/1:12,0:12:4.12:47,0,4	0/0:23,0:23:32.98:0,33,742	1/1:24,1:25:0.26:144,0,0	1/1:27,1:29:38:191,38,0	0/1:21,2:23:2.76:130,0,3	0/1:18,0:18:45.67:46,0,55	1/1:29,3:32:5.37:134,5,0	1/1:16,0:16:5.05:74,5,0	0/1:9,1:10:10.71:35,0,11	0/1:13,1:14:19.11:42,0,19	0/1:22,0:22:59.29:59,0,96	0/0:19,0:19:57.17:0,57,771	0/0:14,0:14:42.12:0,42,558	0/0:24,0:24:63.13:0,63,806	0/1:17,0:17:59.09:59,0,101	0/1:27,2:29:99:109,0,117	0/1:22,0:22:36.99:85,0,37	0/1:4,0:4:8.11:8,0,21
chr10	58754336	.	TGTGGG	T	9230	PASS	AC=22;AF=0.407;AN=54;BaseQRankSum=-0.432;DP=596;FS=3.716;HRun=0;HaplotypeScore=173.0430;InbreedingCoeff=0.9691;MQ=60.53;MQ0=9;MQRankSum=-11.770;QD=37.67;ReadPosRankSum=3.527;VQSLOD=4.8528;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:93.34:0,93,1387	0/0:9,0:9:26.30:0,26,379	0/0:35,0:16:43.91:0,44,654	0/0:25,0:16:24.26:0,24,515	0/0:23,0:23:47.22:0,47,797	0/0:10,0:10:15:0,15,244	0/0:30,0:30:66.83:0,67,912	0/0:26,0:26:9.16:0,9,597	0/0:12,0:12:18.01:0,18,318	1/1:10,18:28:72.17:1247,72,0	1/1:5,8:13:14.95:125,15,0	0/0:20,0:20:25.59:0,26,362	1/1:5,26:30:78.16:1507,78,0	1/1:9,24:33:62.88:1112,63,0	1/1:2,18:20:42.02:827,42,0	0/0:16,0:16:21.80:0,22,300	0/0:35,0:35:93:0,93,1295	0/0:21,0:21:56.72:0,57,1010	1/1:3,18:21:57.01:1005,57,0	1/1:3,10:13:8.97:156,9,0	1/1:4,16:20:12.34:177,12,0	0/0:14,0:14:30.08:0,30,711	0/0:11,0:11:15.02:0,15,245	0/0:20,0:20:47.95:0,48,991	1/1:2,15:17:25.85:565,26,0	1/1:4,25:28:78.18:1539,78,0	1/1:3,17:19:48.13:971,48,0	./.
chr10	58754337	.	GT	G	3533.99	PASS	AB=1.000;AC=25;AF=0.463;AN=54;BaseQRankSum=7.268;DP=591;FS=2.127;HRun=1;HaplotypeScore=161.5613;InbreedingCoeff=0.7507;MQ=60.55;MQ0=9;MQRankSum=-11.212;QD=11.70;ReadPosRankSum=3.000;VQSLOD=2.5008;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,108,1098	0/0:9,0:9:26.79:0,27,285	0/0:33,1:16:15.75:0,16,297	0/0:25,0:16:23.81:0,24,246	0/0:24,1:25:60.52:0,61,584	0/0:5,0:5:14.95:0,15,131	0/0:30,0:30:9.86:0,10,281	0/0:29,0:29:66.23:0,66,657	0/0:11,0:11:14.17:0,14,151	1/1:27,0:27:71.53:546,72,0	1/1:13,0:13:14.96:125,15,0	0/1:19,0:19:18.05:18,0,75	1/1:30,1:30:72.84:516,73,0	1/1:32,0:32:62.34:452,62,0	1/1:19,0:19:41.54:283,42,0	0/1:21,0:21:32.13:32,0,112	0/0:34,0:34:93.04:0,93,1010	0/0:22,0:22:56.16:0,56,588	1/1:20,1:21:51.87:377,52,0	1/1:11,2:13:8.95:68,9,0	1/1:19,0:19:12.36:86,12,0	0/0:13,0:13:26.81:0,27,295	0/0:8,0:8:11.98:0,12,114	0/1:21,0:21:9.89:10,0,300	1/1:17,0:17:29.68:209,30,0	1/1:29,0:28:65:477,65,0	1/1:20,0:19:47.59:336,48,0	./.
chr10	58754338	.	TG	T	843.20	PASS	AB=0.941;AC=24;AF=0.429;AN=56;BaseQRankSum=11.151;DP=607;FS=13.551;HRun=11;HaplotypeScore=164.5636;InbreedingCoeff=0.6216;MQ=62.02;MQ0=8;MQRankSum=-11.475;QD=2.76;ReadPosRankSum=4.729;VQSLOD=-0.0452;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:44:64.75:0,65,366	0/0:9,0:9:24.45:0,24,123	0/0:33,1:18:1.95:0,2,209	0/0:26,0:16:32.92:0,33,285	0/0:24,0:25:24.17:0,24,169	0/0:6,0:8:8.82:0,9,66	0/1:30,2:33:40.86:41,0,151	0/0:31,0:31:18.98:0,19,130	0/1:12,1:13:6.63:7,0,121	1/1:25,0:25:33.59:108,34,0	0/1:12,0:12:0:0,0,0	0/0:17,1:18:9.70:0,10,233	1/1:31,0:30:49.34:160,49,0	1/1:31,0:31:31.49:99,31,0	1/1:19,0:19:26.63:83,27,0	0/0:20,1:21:12.40:0,12,268	0/0:33,0:34:69.53:0,70,370	0/0:21,0:22:33.34:0,33,220	1/1:21,0:21:30.98:107,31,0	1/1:12,0:12:4.43:14,4,0	1/1:18,0:18:4.88:14,5,0	0/0:15,1:16:2.40:0,2,214	0/0:11,0:11:6.01:0,6,58	0/1:22,3:25:53.53:54,0,261	1/1:17,0:17:17.72:56,18,0	1/1:29,0:28:53.76:194,54,0	1/1:20,0:19:31.72:102,32,0	0/0:1,0:1:0:0,0,0
chr10	58754346	.	GGGGA	G	421.95	PASS	AB=0.984;AC=12;AF=0.214;AN=56;BaseQRankSum=14.092;DP=611;FS=29.661;HRun=0;HaplotypeScore=177.4618;InbreedingCoeff=-0.0380;MQ=65.54;MQ0=5;MQRankSum=-13.122;QD=1.62;ReadPosRankSum=8.762;VQSLOD=0.8307;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:65.29:0,65,1376	0/0:12,0:12:34.72:0,35,456	0/0:33,0:21:24.25:0,24,795	0/0:21,0:15:32.45:0,32,540	0/0:25,0:25:31.23:0,31,743	0/0:11,0:11:30.05:0,30,465	0/0:31,0:31:69.19:0,69,1191	0/1:33,0:33:3.53:4,0,806	0/0:12,0:12:30.09:0,30,624	0/1:23,0:23:99:114,0,102	0/0:10,0:10:8.74:0,9,67	0/0:18,0:18:46.04:0,46,986	1/1:27,1:27:17.04:119,17,0	0/1:28,0:28:42.93:43,0,171	0/1:20,0:20:51.80:52,0,70	0/0:20,0:20:44.81:0,45,989	0/0:32,0:32:87.10:0,87,1307	0/0:18,0:18:49.30:0,49,949	0/1:17,1:18:28.70:36,0,29	0/1:15,2:17:17.54:18,0,237	0/1:20,0:20:1.29:1,0,34	0/0:21,0:21:57.60:0,58,1003	0/0:13,0:13:35.93:0,36,519	0/0:25,0:25:63.61:0,64,1265	0/1:20,0:20:26.69:27,0,147	0/1:32,0:31:78.59:79,0,193	0/1:22,0:21:75.34:81,0,75	0/0:6,0:6:18.03:0,18,239
chr10	58754502	.	TC	T	11055.22	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=14.925;DP=681;FS=3.214;HRun=1;HaplotypeScore=71.2985;InbreedingCoeff=0.9997;MQ=67.96;MQ0=1;MQRankSum=-2.557;QD=39.48;ReadPosRankSum=0.129;VQSLOD=5.3988;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,163,2528	0/0:10,0:10:30.10:0,30,468	0/0:19,0:15:45.09:0,45,621	0/0:16,0:15:39.53:0,40,537	0/0:31,0:31:93.30:0,93,1407	0/0:19,0:19:57.17:0,57,865	0/0:24,0:24:72.22:0,72,1097	0/0:36,0:36:99:0,108,1657	0/0:24,0:24:72.25:0,72,1144	1/1:0,36:36:99:1391,102,0	1/1:0,13:13:35.29:446,35,0	0/0:22,0:22:66.23:0,66,1053	1/1:0,26:26:72.24:1006,72,0	1/1:0,26:26:78.26:1088,78,0	1/1:0,29:29:87.29:1215,87,0	0/0:17,0:17:51.16:0,51,786	0/0:34,0:34:99:0,102,1606	0/0:24,0:24:60.27:0,60,958	1/1:0,15:15:45.07:568,45,0	1/1:1,25:26:30.32:997,30,0	1/1:0,26:26:78.26:1085,78,0	0/0:19,0:19:57.19:0,57,908	0/0:22,0:22:66.22:0,66,1049	0/0:30,0:30:90.31:0,90,1421	1/1:0,24:24:69.23:964,69,0	1/1:0,23:23:69.20:911,69,0	1/1:0,27:27:72.24:1006,72,0	1/1:0,9:9:27.09:377,27,0
chr10	58754828	.	C	CGT	2058.58	PASS	AB=0.878;AC=32;AF=0.640;AN=50;BaseQRankSum=-1.663;DP=577;FS=1.839;HRun=0;HaplotypeScore=88.6832;InbreedingCoeff=-0.0732;MQ=64.20;MQ0=11;MQRankSum=0.034;QD=4.57;ReadPosRankSum=-1.784;VQSLOD=2.6030;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:31,0:31:8.97:86,9,0	1/1:8,0:14:2.99:26,3,0	./.	./.	1/1:9,0:15:6:52,6,0	0/1:11,1:13:32.54:33,0,67	0/1:21,0:21:20.38:99,0,20	1/1:25,0:24:11.59:92,12,0	1/1:10,0:14:24.01:237,24,0	1/1:13,4:17:9.03:133,9,0	0/1:16,3:20:23.41:80,0,23	0/0:23,0:23:18.02:0,18,184	1/1:7,5:13:3.48:45,3,0	0/1:11,9:21:23.37:80,0,23	0/1:21,9:30:11.36:245,0,11	1/1:13,7:21:6.02:89,6,0	1/1:15,0:27:21.02:213,21,0	0/1:15,0:18:1.74:2,0,106	./.	0/1:25,0:25:0.34:93,0,0	1/1:13,8:25:6.01:89,6,0	0/0:15,0:15:3:0,3,32	0/0:18,0:18:14.57:0,15,106	0/1:23,0:24:33.46:33,0,64	0/1:8,8:19:14.03:204,0,14	0/1:23,0:24:2.11:121,0,2	0/1:15,7:23:20.35:121,0,20	0/1:6,0:6:26.39:37,0,26
chr10	58755075	.	GT	G	12500.86	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=11.748;DP=656;FS=2.429;HRun=7;HaplotypeScore=78.5814;InbreedingCoeff=0.9992;MQ=84.53;MQ0=0;MQRankSum=-7.101;QD=26.15;ReadPosRankSum=2.492;VQSLOD=5.6666;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,44:44:99:1254,123,0	1/1:1,11:12:30.07:306,30,0	0/0:25,0:23:57.16:0,57,664	0/0:27,0:27:60.12:0,60,679	1/1:0,15:15:45.06:448,45,0	0/0:15,0:15:42.12:0,42,506	0/0:22,0:22:57.10:0,57,671	1/1:8,32:40:90.09:868,90,0	1/1:2,14:16:42.10:428,42,0	1/1:3,21:24:63.11:633,63,0	1/1:1,24:25:66.14:673,66,0	0/0:28,0:28:78.25:0,78,981	1/1:3,19:22:54.12:550,54,0	1/1:4,23:27:66.14:668,66,0	1/1:1,24:25:66.15:673,66,0	1/1:1,21:22:60.10:601,60,0	1/1:3,33:36:96.21:979,96,0	1/1:1,13:14:33.07:337,33,0	1/1:6,22:28:65.65:631,66,0	1/1:2,15:17:48.09:483,48,0	1/1:4,32:36:96.21:979,96,0	0/0:13,0:13:39.12:0,39,491	0/0:15,0:15:42.13:0,42,526	0/0:33,0:33:90.29:0,90,1132	1/1:1,20:21:57.13:581,57,0	1/1:4,27:31:80.88:767,81,0	1/1:2,14:16:42.09:428,42,0	1/1:0,7:7:21.05:214,21,0
chr10	58755736	.	A	ATGGAAGCGTGGCCATTCTCTAATTCAGTCAT	62522.16	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=8.233;DP=781;FS=2.501;HRun=0;HaplotypeScore=554.3914;InbreedingCoeff=0.9968;MQ=86.69;MQ0=0;MQRankSum=-18.581;QD=253.13;ReadPosRankSum=4.746;VQSLOD=4.0091;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:61,0:61:99:0,181,12822	0/0:11,0:11:33.07:0,33,2055	0/0:43,0:43:99:0,129,5255	0/0:33,0:32:84.59:0,85,4066	0/0:23,0:23:69.24:0,69,5013	0/0:15,0:15:45.14:0,45,3281	0/0:26,0:26:78.25:0,78,5618	0/0:41,0:41:99:0,123,6961	0/0:38,0:38:99:0,114,8004	1/1:24,1:29:78.27:7595,78,0	1/1:12,6:19:54.19:5892,54,0	0/0:26,0:26:78.25:0,78,5187	1/1:8,3:18:33.11:3829,33,0	1/1:17,3:24:48.16:5480,48,0	1/1:25,2:34:75.26:8789,75,0	0/0:42,0:42:99:0,123,9112	0/0:46,0:46:99:0,129,9039	0/0:30,0:30:90.20:0,90,5835	1/1:8,0:8:24.06:1817,24,0	1/1:23,1:31:78.27:7629,78,0	1/1:9,1:15:21.07:1878,21,0	0/0:41,0:41:99:0,123,7659	0/0:20,0:20:60.19:0,60,3915	0/0:38,0:38:99:0,111,7899	1/1:7,3:13:30.10:3918,30,0	1/1:25,4:35:99:9852,102,0	1/1:11,3:15:45.15:5048,45,0	1/1:5,0:5:15.05:793,15,0
chr10	58756413	.	ATGTTGTTGTTGT	A	11134.39	PASS	AB=0.815;AC=31;AF=0.596;AN=52;BaseQRankSum=3.705;DP=743;FS=16.337;HRun=0;HaplotypeScore=266.1148;InbreedingCoeff=0.8490;MQ=71.74;MQ0=5;MQRankSum=-8.683;QD=28.62;ReadPosRankSum=1.565;VQSLOD=2.5266;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:36:41.64:0,42,581	1/1:2,0:3:8.98:71,9,0	./.	./.	1/1:29,0:36:11.52:163,12,0	0/0:16,0:24:15.94:0,16,400	0/0:18,0:24:26.78:0,27,579	0/0:29,0:28:12.02:0,12,147	0/0:8,0:16:9.65:0,10,283	1/1:23,10:33:39.13:1211,39,0	1/1:18,7:25:33.11:1008,33,0	0/0:18,0:30:48.13:0,48,1172	1/1:26,10:36:48.16:1385,48,0	1/1:16,8:24:36.11:1039,36,0	1/1:21,7:28:36.12:1102,36,0	0/0:29,0:29:48.14:0,48,1696	0/1:17,0:22:30.62:85,0,31	1/1:16,0:16:11.87:216,12,0	1/1:15,1:16:9.03:246,9,0	1/1:19,7:26:30.10:981,30,0	1/1:28,0:28:8.46:200,8,0	0/0:17,0:20:15.05:0,15,394	0/0:25,0:34:40.16:0,40,880	0/0:20,0:36:6.91:0,7,112	1/1:15,5:20:39:953,39,0	1/1:22,4:26:15.05:507,15,0	1/1:22,6:27:45.15:1365,45,0	1/1:18,2:20:24.08:603,24,0
chr10	58756481	.	G	GT	11687.87	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=4.280;DP=724;FS=0.715;HRun=8;HaplotypeScore=142.2336;InbreedingCoeff=0.9635;MQ=71.71;MQ0=6;MQRankSum=-3.640;QD=24.71;ReadPosRankSum=0.772;VQSLOD=3.0728;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,34:37:87.26:1004,87,0	1/1:1,9:10:27.08:311,27,0	0/0:48,0:28:33.04:0,33,430	0/0:47,0:28:68.45:0,68,567	1/1:7,20:27:48.10:539,48,0	0/0:13,0:13:26.99:0,27,240	0/0:22,0:22:60.01:0,60,544	1/1:6,23:29:69.18:776,69,0	0/0:21,0:22:53.04:0,53,468	1/1:11,19:30:57.14:646,57,0	1/1:8,24:32:66.15:746,66,0	0/0:26,0:26:63.02:0,63,576	1/1:3,27:30:75.22:865,75,0	1/1:4,22:27:63.02:707,63,0	1/1:4,29:33:78.19:885,78,0	1/1:3,0:19:45.49:232,45,0	1/1:4,28:32:53.79:872,54,0	1/1:2,0:12:25.57:130,26,0	1/1:3,16:19:48.08:520,48,0	1/1:7,29:36:87.24:990,87,0	1/1:5,22:27:51.15:588,51,0	0/0:18,0:18:51.03:0,51,467	0/0:18,0:18:48.02:0,48,439	0/0:36,0:36:65.96:0,66,585	1/1:4,13:17:39.12:450,39,0	1/1:3,20:23:29.83:586,30,0	1/1:5,19:23:54.01:623,54,0	1/1:2,7:9:0.99:217,1,0
chr10	58756982	.	T	TACAC	8464.74	PASS	AB=0.987;AC=35;AF=0.625;AN=56;BaseQRankSum=3.573;DP=720;FS=11.127;HRun=0;HaplotypeScore=188.7136;InbreedingCoeff=0.7618;MQ=59.12;MQ0=19;MQRankSum=-4.999;QD=18.13;ReadPosRankSum=1.601;VQSLOD=3.9941;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,15:27:20.77:502,21,0	1/1:3,3:6:6.02:149,6,0	0/0:37,0:13:12.35:0,12,113	0/1:39,0:18:5.84:6,0,170	1/1:14,22:38:35.24:830,35,0	0/0:31,0:31:66.22:0,66,1100	0/0:23,0:23:45.14:0,45,722	1/1:22,18:40:34.39:1029,34,0	0/0:28,0:28:69.21:0,69,1073	1/1:35,0:34:45.89:638,46,0	1/1:28,0:26:21.13:350,21,0	0/0:31,0:31:75.24:0,75,1230	1/1:29,0:29:58.11:779,58,0	1/1:21,0:22:14.94:128,15,0	1/1:28,0:28:13.20:180,13,0	1/1:9,14:26:53.62:1188,54,0	1/1:5,12:17:17.79:410,18,0	0/0:5,0:13:12.01:0,12,112	1/1:18,0:17:27.48:369,27,0	0/1:21,0:21:12:75,0,12	1/1:11,0:10:3.01:68,3,0	0/0:33,0:34:84.22:0,84,1279	0/0:21,0:21:54.12:0,54,804	0/0:32,0:32:71.99:0,72,1181	1/1:19,0:19:19.24:230,19,0	1/1:29,1:29:69.45:1083,69,0	0/1:23,0:23:1.85:255,0,2	1/1:5,0:5:14.23:197,14,0
chr10	58757020	.	AAG	A	247.79	PASS	AB=0.995;AC=13;AF=0.283;AN=46;BaseQRankSum=5.349;DP=590;FS=4.732;HRun=0;HaplotypeScore=183.2054;InbreedingCoeff=0.1554;MQ=45.65;MQ0=21;MQRankSum=-1.739;QD=1.28;ReadPosRankSum=2.522;VQSLOD=2.5917;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:3.68:0,4,26	./.	./.	0/0:33,0:5:0:0,0,0	0/0:30,0:29:14.84:0,15,117	0/0:32,0:31:68.99:0,69,954	0/0:24,2:26:27.32:0,27,766	0/0:28,0:26:5.91:0,6,39	1/1:31,0:31:20.22:238,20,0	0/1:17,0:16:21.84:22,0,57	./.	0/0:23,0:23:19.98:0,20,658	1/1:21,0:21:8.35:52,8,0	0/1:17,0:17:0:0,0,0	./.	0/0:20,0:20:6.35:0,6,37	0/1:14,0:14:4.26:4,0,18	0/0:14,0:10:5.48:0,5,46	0/1:16,0:14:12.14:12,0,81	0/1:17,0:16:0:0,0,0	./.	0/0:31,0:31:14.46:0,14,589	0/1:19,1:19:1.38:1,0,403	0/0:32,3:35:27.31:0,27,854	0/0:14,0:14:0:0,0,0	0/1:23,0:22:18.96:19,0,96	0/1:12,0:11:13.86:17,0,14	0/1:6,0:5:9.09:9,0,30
chr10	58757070	.	G	GAGACAG	3699.95	PASS	AB=1.000;AC=27;AF=0.482;AN=56;BaseQRankSum=11.582;DP=692;FS=1.579;HRun=0;HaplotypeScore=206.9267;InbreedingCoeff=0.7224;MQ=53.03;MQ0=18;MQRankSum=-7.961;QD=10.91;ReadPosRankSum=-5.511;VQSLOD=1.5309;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:38.90:0,39,663	0/0:5,0:5:9.03:0,9,166	0/1:36,0:8:16.74:17,0,180	0/1:57,0:15:6.21:6,0,120	0/0:35,0:34:71.97:0,72,1162	0/0:34,0:34:72.23:0,72,1453	0/0:30,0:30:42.08:0,42,694	0/0:40,0:37:81.23:0,81,1310	0/0:34,0:34:86.54:0,87,1642	1/1:28,0:27:53.54:888,54,0	1/1:20,0:20:10.80:150,11,0	0/0:28,0:28:78.25:0,78,1601	1/1:24,0:24:32.21:452,32,0	1/1:17,0:17:13.36:149,13,0	1/1:20,0:20:12.13:103,12,0	0/0:20,0:20:9.03:0,9,155	0/0:13,0:13:24.05:0,24,369	0/1:15,0:13:5.39:5,0,78	1/1:24,0:24:34.97:711,35,0	1/1:28,0:28:15.90:198,16,0	1/1:15,0:13:3.80:26,4,0	0/0:29,0:29:69.24:0,69,1384	0/0:19,0:19:42.06:0,42,793	0/0:36,0:36:66.19:0,66,1277	1/1:12,0:12:6.81:75,7,0	1/1:19,0:19:30.07:692,30,0	1/1:5,12:18:6.02:115,6,0	1/1:6,0:6:6.02:112,6,0
chr10	58757108	.	GAGAGAGAC	G	294.11	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=2.292;DP=783;FS=0.000;HRun=0;HaplotypeScore=240.5149;InbreedingCoeff=0.8758;MQ=57.12;MQ0=8;MQRankSum=-3.442;QD=5.88;ReadPosRankSum=0.688;VQSLOD=2.3943;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:37:60.21:0,60,2026	0/0:10,0:10:30.10:0,30,1132	0/0:31,0:7:9:0,9,172	0/0:56,0:23:33.63:0,34,567	0/0:45,0:45:99:0,114,3866	0/0:33,0:33:77.98:0,78,2799	0/0:23,0:23:63.20:0,63,2065	0/0:38,0:36:72.23:0,72,1571	0/0:33,0:33:81.25:0,81,2836	0/0:28,0:28:69.20:0,69,2295	0/0:23,0:23:28.45:0,28,882	0/0:37,0:37:99:0,102,3314	0/0:29,0:29:53:0,53,1870	0/0:21,0:21:30.99:0,31,1159	0/0:33,0:33:55.89:0,56,1632	1/1:3,25:28:5.80:158,6,0	0/0:17,0:17:42.11:0,42,1166	1/1:7,15:22:9.03:239,9,0	0/0:19,0:16:33.11:0,33,763	0/0:37,0:37:67.11:0,67,2375	0/0:17,0:16:24.97:0,25,769	0/0:32,0:32:90.30:0,90,3141	0/0:21,0:21:51.17:0,51,1694	0/0:30,0:30:69.16:0,69,2344	0/0:21,0:21:36.11:0,36,1117	0/0:23,0:23:66.18:0,66,1905	0/0:23,0:23:30.10:0,30,1054	0/0:15,0:14:33.10:0,33,1043
chr10	58758301	.	C	CCCTCCTCTT	6521.09	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=1.896;DP=446;FS=119.033;HRun=0;HaplotypeScore=135.0514;InbreedingCoeff=0.9021;MQ=70.54;MQ0=1;MQRankSum=-10.127;QD=47.95;ReadPosRankSum=-2.234;VQSLOD=1.4446;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:26:36.03:0,36,796	0/0:4,0:4:6.02:0,6,68	0/0:27,0:24:19.35:0,19,314	0/0:20,0:15:15.01:0,15,330	0/0:16,0:16:29.82:0,30,777	0/0:21,0:21:42.12:0,42,1033	0/0:19,0:19:30.07:0,30,674	0/0:24,0:24:42.13:0,42,1032	0/0:23,0:23:51.18:0,51,1343	1/1:6,4:10:18.06:633,18,0	1/1:1,4:5:6.02:275,6,0	0/0:32,0:32:63.20:0,63,1709	1/1:5,6:11:21.03:658,21,0	1/1:8,9:17:39.13:1466,39,0	1/1:13,3:16:18.06:619,18,0	0/0:9,0:9:12.04:0,12,337	0/0:12,0:12:24.08:0,24,630	0/0:12,0:12:18.03:0,18,397	1/1:12,0:11:9.01:190,9,0	1/1:6,2:8:9.03:234,9,0	1/1:7,0:7:6.02:88,6,0	0/0:11,0:11:27.09:0,27,701	0/0:19,0:19:45.15:0,45,1229	0/0:34,0:34:81.23:0,81,2078	1/1:11,3:14:21.01:563,21,0	1/1:14,0:14:24.07:438,24,0	1/1:9,7:17:30.10:1285,30,0	1/1:5,0:5:3.01:72,3,0
chr10	58758349	.	CCA	C	1310.13	PASS	AB=0.955;AC=19;AF=0.339;AN=56;BaseQRankSum=7.278;DP=491;FS=13.337;HRun=0;HaplotypeScore=97.4712;InbreedingCoeff=-0.4032;MQ=57.09;MQ0=3;MQRankSum=-7.315;QD=5.00;ReadPosRankSum=-1.194;VQSLOD=1.5943;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:37,0:36:99:299,0,316	0/1:4,1:5:33.68:34,0,161	0/0:29,0:16:41.95:0,42,558	0/0:31,0:26:66.05:0,66,1061	0/1:9,0:9:31.42:31,0,107	0/0:27,0:27:78.25:0,78,1343	0/0:16,0:16:48.14:0,48,822	0/1:24,0:23:99:131,0,614	0/0:30,0:30:80.52:0,81,1505	0/1:13,1:13:14.30:14,0,381	0/1:6,1:7:70.02:70,0,134	0/0:25,0:25:75.25:0,75,1252	0/1:17,1:18:72.11:72,0,275	0/1:17,0:16:99:129,0,197	0/1:17,1:18:59.69:60,0,242	0/1:10,0:10:53.29:53,0,322	0/1:17,0:17:75.64:76,0,247	0/1:16,0:16:88.29:88,0,515	0/1:18,0:17:10.91:11,0,511	0/0:8,1:9:2.68:0,3,163	0/1:8,0:8:62.08:71,0,62	0/0:15,0:15:44.64:0,45,756	0/0:13,0:13:36.12:0,36,618	0/0:34,0:34:96.32:0,96,1619	0/1:13,1:14:93.23:103,0,93	0/1:12,1:13:33.45:33,0,323	0/1:13,3:15:99:163,0,230	1/1:1,0:1:3.01:32,3,0
chr10	58758362	.	C	CACA	2146.65	PASS	AB=0.600;AC=23;AF=0.411;AN=56;BaseQRankSum=-0.224;DP=512;FS=65.806;HRun=0;HaplotypeScore=112.0315;InbreedingCoeff=0.8609;MQ=57.61;MQ0=3;MQRankSum=-6.104;QD=14.22;ReadPosRankSum=0.274;VQSLOD=0.8500;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:33:55.79:0,56,436	0/0:6,0:6:11.91:0,12,106	0/0:28,0:16:31.74:0,32,396	0/0:30,0:25:44.02:0,44,541	0/0:14,0:14:23.56:0,24,220	0/0:32,0:32:87.08:0,87,980	0/0:18,0:18:45.01:0,45,510	0/0:27,0:26:21.02:0,21,222	0/0:27,0:27:69.13:0,69,905	1/1:4,7:10:0.09:324,0,0	1/1:4,2:6:11.95:94,12,0	0/0:23,0:23:51.09:0,51,638	1/1:14,3:17:16.94:119,17,0	1/1:12,7:18:26.78:270,27,0	1/1:12,5:17:18.69:150,19,0	0/0:11,0:11:29.74:0,30,238	0/0:21,0:21:29.61:0,30,261	0/0:15,0:15:32.95:0,33,377	1/1:9,8:17:22.64:345,23,0	1/1:3,6:9:11.87:114,12,0	1/1:13,0:13:27.80:215,28,0	0/0:24,0:24:66.04:0,66,711	0/0:23,0:23:50.94:0,51,514	0/0:28,0:28:69.08:0,69,901	1/1:6,9:15:11.90:145,12,0	1/1:4,8:12:23.54:421,24,0	0/1:4,7:11:8.01:123,0,8	1/1:2,0:2:5.92:39,6,0
chr10	58758763	.	AG	A	10316.73	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=16.259;DP=745;FS=0.911;HRun=5;HaplotypeScore=73.3062;InbreedingCoeff=0.9996;MQ=84.45;MQ0=0;MQRankSum=-3.469;QD=30.80;ReadPosRankSum=4.318;VQSLOD=5.3890;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,99,1327	0/0:8,0:8:24.08:0,24,328	0/0:31,1:32:50.16:0,50,1024	0/0:20,0:20:54.06:0,54,694	0/0:25,0:25:75.24:0,75,1008	0/0:25,0:25:75.24:0,75,1009	0/0:35,0:35:93.29:0,93,1252	0/0:34,0:34:78.26:0,78,1066	0/0:25,0:25:75.24:0,75,1009	1/1:1,30:31:90.26:1020,90,0	1/1:0,21:21:54.15:613,54,0	0/0:27,0:27:78.23:0,78,1035	1/1:2,29:31:77.77:884,78,0	1/1:1,26:27:66.19:747,66,0	1/1:1,51:52:99:1699,150,0	0/0:20,0:20:57.19:0,57,777	0/0:28,0:28:84.28:0,84,1145	0/0:22,0:22:63.21:0,63,857	1/1:1,22:23:66.16:736,66,0	1/1:2,23:25:63.18:715,63,0	1/1:3,27:30:75.21:851,75,0	0/0:18,0:18:48.15:0,48,638	0/0:22,0:22:63.21:0,63,859	0/0:31,0:31:87.29:0,87,1190	1/1:2,22:24:60.17:680,60,0	1/1:1,26:27:78.21:875,78,0	1/1:0,34:34:99:1157,102,0	1/1:0,10:10:30.09:340,30,0
chr10	58759660	.	C	CT	11407.60	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=21.861;DP=760;FS=5.051;HRun=3;HaplotypeScore=150.7348;InbreedingCoeff=0.9917;MQ=81.98;MQ0=1;MQRankSum=-6.236;QD=36.10;ReadPosRankSum=2.165;VQSLOD=3.6394;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,135,1620	0/0:11,0:11:33.10:0,33,396	0/0:32,0:32:84.22:0,84,969	0/0:19,0:19:45.10:0,45,506	0/0:30,0:30:90.28:0,90,1080	0/0:31,0:30:90.28:0,90,1079	0/0:31,0:31:87.27:0,87,1044	0/0:34,0:34:96.28:0,96,1141	0/0:19,0:19:57.17:0,57,683	1/1:3,31:34:93.30:1282,93,0	1/1:1,26:28:72.24:1005,72,0	0/0:24,0:24:66.20:0,66,791	1/1:2,28:30:84.28:1157,84,0	1/1:2,26:28:72.24:994,72,0	1/1:3,28:30:84.28:1168,84,0	0/0:33,0:33:99:0,99,1177	0/0:31,0:31:90.25:0,90,1066	0/0:11,0:11:27.08:0,27,324	1/1:7,12:19:42.14:571,42,0	1/1:2,33:35:96.23:1299,96,0	1/1:4,17:21:45.15:630,45,0	0/0:31,0:31:87.25:0,87,1031	0/0:21,0:21:63.19:0,63,756	0/0:36,0:36:99:0,105,1260	1/1:1,21:22:60.20:839,60,0	1/1:1,25:26:42.25:1013,42,0	1/1:4,34:38:96.31:1325,96,0	1/1:0,3:3:9.03:126,9,0
chr10	58765912	.	C	CGT	1722.39	PASS	AB=1.000;AC=36;AF=0.720;AN=50;BaseQRankSum=-1.392;DP=572;FS=28.271;HRun=0;HaplotypeScore=106.9082;InbreedingCoeff=-0.0128;MQ=63.32;MQ0=10;MQRankSum=0.583;QD=3.70;ReadPosRankSum=-3.744;VQSLOD=-0.0031;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:35,0:35:8.83:126,9,0	0/1:16,0:15:45.06:126,0,45	./.	./.	1/1:22,0:22:7.26:72,7,0	0/1:20,0:20:22.38:53,0,22	0/1:23,0:23:21.35:21,0,99	1/1:24,0:23:1.77:3,2,0	./.	1/1:20,0:19:24.02:252,24,0	0/0:12,0:12:0.47:0,0,1	1/1:26,0:26:6:53,6,0	1/1:11,2:16:2.51:43,3,0	0/1:19,0:19:7.01:120,0,7	1/1:21,0:21:21.04:262,21,0	0/0:17,0:22:11.32:0,11,55	0/1:29,0:29:19.22:26,0,19	0/0:18,0:22:5.59:0,6,26	1/1:10,0:10:3:27,3,0	1/1:16,0:16:3.01:32,3,0	0/1:40,0:39:19.54:91,0,20	1/1:17,0:17:5.83:82,6,0	0/1:19,0:18:24.08:36,0,24	1/1:28,0:28:12.01:132,12,0	1/1:13,0:12:3:29,3,0	1/1:24,0:23:11.69:95,12,0	1/1:15,0:15:14.97:145,15,0	0/1:11,0:11:8.11:37,0,8
chr10	58765935	.	G	GTA	1103.07	PASS	AB=0.786;AC=6;AF=0.107;AN=56;BaseQRankSum=3.253;DP=610;FS=1.545;HRun=0;HaplotypeScore=103.6812;InbreedingCoeff=-0.1630;MQ=51.84;MQ0=29;MQRankSum=2.728;QD=6.53;ReadPosRankSum=5.969;VQSLOD=3.0648;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:42,2:43:54.93:543,0,55	0/1:6,11:16:27.09:216,0,27	0/0:16,0:7:16.47:0,16,124	0/0:15,0:8:21:0,21,196	0/1:6,19:25:17.85:117,0,18	0/0:21,0:20:25.98:0,26,297	0/0:22,0:21:35.37:0,35,452	0/1:27,0:24:17.56:256,0,18	0/0:19,0:19:44.69:0,45,354	0/0:22,0:19:2.12:0,2,214	0/0:16,0:16:33.29:0,33,255	0/0:28,0:28:35.72:0,36,350	0/0:17,0:17:0.28:0,0,102	0/0:16,0:16:0.59:0,1,122	0/1:22,0:22:39.59:40,0,242	0/0:25,0:25:40.83:0,41,256	0/1:10,24:33:49.32:53,0,49	0/0:24,0:23:56.60:0,57,423	0/0:11,0:9:20.73:0,21,124	0/0:16,0:16:23.86:0,24,236	0/0:34,0:32:34.35:0,34,477	0/0:20,0:20:2.63:0,3,211	0/0:20,0:19:30.66:0,31,359	0/0:27,0:27:35.27:0,35,490	0/0:15,0:14:25.79:0,26,224	0/0:29,0:25:48.53:0,49,462	0/0:20,0:20:25.10:0,25,292	0/0:8,0:6:0.23:0,0,103
chr10	58766291	.	G	GA	4654.98	PASS	AB=0.589;AC=20;AF=0.357;AN=56;BaseQRankSum=-3.346;DP=664;FS=6.530;HRun=10;HaplotypeScore=105.8142;InbreedingCoeff=0.6945;MQ=86.17;MQ0=4;MQRankSum=-1.734;QD=18.11;ReadPosRankSum=0.798;VQSLOD=4.7332;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:1,0:45:81.48:0,81,236	0/0:2,0:13:22.41:0,22,65	0/0:44,0:31:3.84:0,4,322	0/0:44,0:31:34.64:0,35,301	0/0:5,0:29:50.32:0,50,161	0/0:19,0:21:46.91:0,47,368	0/0:19,1:20:21.90:0,22,381	0/0:5,0:24:39.09:0,39,125	1/1:3,1:20:48.62:265,49,0	1/1:7,14:21:17.93:376,18,0	1/1:2,15:18:17.25:361,17,0	0/0:27,0:27:70.88:0,71,567	0/0:27,1:29:47.92:0,48,584	1/1:5,15:20:11.54:327,12,0	1/1:9,22:31:5.72:457,6,0	0/0:2,0:18:24.44:0,24,71	0/0:4,0:21:30.55:0,31,88	0/0:20,0:22:61.01:0,61,480	0/1:9,19:29:26.60:537,0,27	0/1:7,10:19:2.10:312,0,2	1/1:6,30:36:50.88:734,51,0	0/0:13,0:14:31.95:0,32,246	0/0:14,0:14:35.75:0,36,281	0/0:18,0:20:55:0,55,430	0/1:4,12:17:13.30:266,0,13	1/1:4,19:24:38.36:583,38,0	0/1:4,14:18:3.22:340,0,3	1/1:1,3:4:9.02:96,9,0
chr10	58766520	.	CCCGCCCA	C	383.87	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.567;DP=672;FS=11.632;HRun=0;HaplotypeScore=149.2294;InbreedingCoeff=0.9154;MQ=82.15;MQ0=0;MQRankSum=-2.433;QD=42.65;ReadPosRankSum=0.205;VQSLOD=3.0663;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,105,3957	0/0:6,0:6:18.06:0,18,726	0/0:17,0:17:48.14:0,48,1774	0/0:21,0:21:7.76:0,8,1715	0/0:24,0:24:69.24:0,69,2749	0/0:19,0:19:54.14:0,54,1890	0/0:21,0:21:63.22:0,63,2364	0/0:39,0:39:99:0,114,4397	0/0:21,0:21:63.22:0,63,2469	0/0:26,0:26:72.25:0,72,2858	0/0:27,0:27:69.22:0,69,2633	0/0:25,0:25:75.26:0,75,3014	0/0:27,0:27:78.27:0,78,3149	0/0:34,0:34:96.33:0,96,3867	0/0:32,0:32:93.32:0,93,3632	0/0:24,0:24:72.25:0,72,2831	0/0:30,0:30:90.31:0,90,3489	1/1:2,7:9:18.06:474,18,0	0/0:18,0:18:45.15:0,45,1778	0/0:27,0:27:78.27:0,78,3047	0/0:33,0:33:84.29:0,84,3386	0/0:15,0:15:45.11:0,45,1714	0/0:23,0:23:66.23:0,66,2641	0/0:33,0:33:91.19:0,91,3424	0/0:23,0:23:66.17:0,66,2397	0/0:22,0:22:66.23:0,66,2532	0/0:28,0:28:84.29:0,84,3368	0/0:13,0:13:39.13:0,39,1333
chr10	58768984	.	GACACACACAC	G	784.43	PASS	AB=0.906;AC=16;AF=0.333;AN=48;BaseQRankSum=3.995;DP=536;FS=9.252;HRun=0;HaplotypeScore=163.8140;InbreedingCoeff=0.2835;MQ=67.76;MQ0=14;MQRankSum=-3.139;QD=4.06;ReadPosRankSum=0.601;VQSLOD=2.1156;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:21:18.53:0,19,332	0/0:12,0:12:9.50:0,10,394	./.	./.	0/0:20,0:22:27.09:0,27,478	0/0:19,0:17:5.37:0,5,142	0/0:29,0:29:15.09:0,15,388	0/0:22,0:21:14.74:0,15,131	1/1:12,4:16:3.01:88,3,0	0/1:17,0:17:0.28:64,0,0	1/1:10,0:9:3.01:38,3,0	0/0:15,0:15:17.89:0,18,522	0/0:14,0:14:9.03:0,9,355	1/1:21,0:20:2.95:25,3,0	1/1:14,4:19:12.51:319,13,0	0/1:17,0:17:10.95:43,0,11	0/0:21,0:22:36.10:0,36,964	0/1:15,2:17:82.20:82,0,103	1/1:12,1:14:6.02:118,6,0	0/1:10,4:14:53.46:65,0,53	0/1:38,0:34:11.58:12,0,55	0/0:17,0:16:6.02:0,6,182	./.	0/0:19,0:18:14.88:0,15,380	./.	0/0:26,0:24:7.57:0,8,82	0/0:12,0:12:6.79:0,7,56	0/1:7,2:9:38.17:82,0,38
chr10	58769467	.	CCTTTCTTT	C	1295.46	PASS	AB=0.970;AC=12;AF=0.231;AN=52;BaseQRankSum=12.826;DP=653;FS=9.173;HRun=0;HaplotypeScore=211.5951;InbreedingCoeff=-0.0065;MQ=51.62;MQ0=7;MQRankSum=-5.817;QD=4.94;ReadPosRankSum=-0.251;VQSLOD=1.5992;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:25:85.50:162,0,85	1/1:4,7:10:7.41:98,7,0	./.	./.	0/1:29,0:28:39.85:257,0,40	0/0:25,0:25:59.57:0,60,1604	0/0:23,0:23:60.16:0,60,1321	0/1:23,0:20:17.05:345,0,17	0/1:31,0:31:70.65:71,0,548	0/1:28,0:27:42.66:43,0,520	0/0:15,0:15:5.86:0,6,307	0/0:31,0:31:93.28:0,93,2391	0/0:30,0:30:90.30:0,90,2572	0/0:32,0:32:6.91:0,7,504	0/1:32,0:32:0.59:1,0,484	0/1:30,0:24:2.24:340,0,2	0/1:16,12:26:5.44:93,0,5	0/0:16,0:13:3.46:0,3,154	0/1:17,0:15:5.45:5,0,256	0/0:28,0:27:24.35:0,24,630	0/0:17,0:17:35.93:0,36,383	0/0:25,0:25:66.67:0,67,1804	0/0:25,0:24:66.12:0,66,1793	0/0:56,0:55:99:0,114,4079	0/0:26,0:26:43.17:0,43,554	0/0:22,0:20:52.53:0,53,505	0/0:14,0:14:27.08:0,27,264	0/1:8,0:8:22.43:22,0,133
chr10	58769472	.	CTTT	C	200.06	PASS	AB=0.781;AC=5;AF=0.096;AN=52;BaseQRankSum=8.644;DP=657;FS=0.000;HRun=3;HaplotypeScore=161.1704;InbreedingCoeff=0.0111;MQ=51.80;MQ0=9;MQRankSum=-6.773;QD=1.59;ReadPosRankSum=1.312;VQSLOD=-0.2599;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:20,5:26:15.36:15,0,353	0/1:8,2:9:3.81:31,0,4	./.	./.	0/1:19,11:29:61.36:61,0,207	0/0:22,0:22:63:0,63,1344	0/0:21,0:21:63.19:0,63,1435	0/0:19,0:15:37.12:0,37,331	0/0:31,0:31:89.31:0,89,1738	0/0:30,0:29:79.74:0,80,1333	0/0:15,0:15:39.10:0,39,685	0/0:31,0:31:93.29:0,93,2139	0/0:31,0:31:93.29:0,93,2164	0/0:28,0:28:78.20:0,78,1394	0/0:35,0:35:95.46:0,95,1705	0/1:15,17:26:99:169,0,181	0/1:24,4:25:39.13:39,0,94	0/0:18,0:15:27.06:0,27,309	0/0:15,0:13:39.07:0,39,706	0/0:29,0:28:78.18:0,78,1465	0/0:21,0:21:34.19:0,34,1072	0/0:27,0:27:78.23:0,78,1728	0/0:28,0:27:78.25:0,78,1720	0/0:57,0:56:99:0,131,3495	0/0:25,0:25:57.26:0,57,1515	0/0:21,0:19:57.19:0,57,1214	0/0:14,0:14:33.11:0,33,654	0/0:9,0:8:24.05:0,24,418
chr10	58769483	.	TCTTTCTTC	T	3868.04	PASS	AB=1.000;AC=22;AF=0.423;AN=52;BaseQRankSum=4.337;DP=662;FS=49.741;HRun=0;HaplotypeScore=209.1517;InbreedingCoeff=-0.2707;MQ=51.58;MQ0=11;MQRankSum=0.596;QD=8.89;ReadPosRankSum=4.785;VQSLOD=1.3623;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:28:67.98:68,0,379	0/1:12,0:11:16.22:16,0,142	./.	./.	0/1:28,0:27:94.72:95,0,198	0/0:24,0:24:8.57:0,9,1120	0/0:21,0:21:59.91:0,60,780	1/1:20,0:15:7.15:83,7,0	1/1:22,7:29:56.75:1007,57,0	0/1:34,0:32:99:251,0,462	0/1:13,0:13:66.34:66,0,75	0/0:32,0:32:87.09:0,87,1709	0/0:32,0:32:87.17:0,87,1988	0/1:27,0:27:99:190,0,146	0/1:33,0:33:99:327,0,220	1/1:28,0:22:33.49:350,33,0	0/1:32,0:29:45.90:46,0,216	0/1:18,0:15:30.25:30,0,160	0/1:13,0:11:8.63:123,0,9	0/1:25,0:24:99:189,0,199	0/1:22,0:22:99:180,0,164	0/0:28,0:28:81.58:0,82,1485	0/0:29,0:28:78.12:0,78,1491	0/0:57,0:56:99:0,138,3531	0/1:24,0:24:73.21:374,0,73	0/1:22,0:20:99:261,0,112	0/1:18,0:18:82.02:82,0,290	0/1:9,0:8:46.02:129,0,46
chr10	58769625	.	G	GTCTC	881.37	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-0.990;DP=734;FS=2.844;HRun=0;HaplotypeScore=135.2153;InbreedingCoeff=0.9892;MQ=73.78;MQ0=0;MQRankSum=-1.536;QD=41.97;ReadPosRankSum=-1.138;VQSLOD=3.6310;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:52.21:0,52,1110	0/0:14,0:14:29.69:0,30,466	0/0:28,0:27:37.72:0,38,631	0/0:42,0:36:59.32:0,59,915	0/0:22,0:22:39.09:0,39,729	0/0:29,0:29:66.21:0,66,1093	0/0:26,0:26:60.15:0,60,926	0/0:25,0:25:45.15:0,45,741	1/1:5,14:21:39.13:976,39,0	0/0:29,0:29:57.25:0,57,969	0/0:14,0:14:24.12:0,24,490	0/0:38,0:38:90.24:0,90,1435	0/0:32,0:32:59.31:0,59,1291	0/0:27,0:27:57.18:0,57,944	0/0:28,0:28:63.20:0,63,1048	0/0:37,0:35:78.20:0,78,1297	0/0:40,0:40:99:0,105,1744	0/0:24,0:24:54.15:0,54,882	0/0:23,0:24:54.13:0,54,783	0/0:18,0:18:36.08:0,36,536	0/0:32,0:32:72.22:0,72,1159	0/0:22,0:22:63.06:0,63,944	0/0:18,0:19:48.10:0,48,727	0/0:33,0:33:90.27:0,90,1457	0/0:27,0:27:49.25:0,49,1078	0/0:21,0:21:45.15:0,45,763	0/0:21,0:21:48.16:0,48,806	0/0:6,0:6:18.06:0,18,307
chr10	58769892	.	GA	G	5574.69	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=1.458;DP=485;FS=8.153;HRun=1;HaplotypeScore=285.6952;InbreedingCoeff=0.7643;MQ=49.34;MQ0=0;MQRankSum=-1.706;QD=11.76;ReadPosRankSum=1.980;VQSLOD=3.2533;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,27:29:75.33:342,75,0	1/1:1,11:12:32.74:157,33,0	0/0:5,0:5:5.93:0,6,73	0/0:6,0:6:2.96:0,3,25	1/1:4,22:26:44.92:237,45,0	1/1:1,14:15:40.27:170,40,0	1/1:0,24:24:61.40:295,61,0	1/1:0,23:23:67:380,67,0	1/1:4,17:21:44.41:258,44,0	1/1:1,11:11:25.97:137,26,0	1/1:0,11:11:27.42:124,27,0	1/1:1,23:24:62.10:269,62,0	1/1:3,19:22:56.73:259,57,0	1/1:2,19:21:54.29:224,54,0	1/1:4,25:29:75.67:351,76,0	1/1:3,30:33:90.90:436,91,0	1/1:4,16:20:41.31:214,41,0	1/1:1,8:9:23.22:134,23,0	1/1:1,13:14:41.06:280,41,0	1/1:1,13:14:32.04:145,32,0	1/1:2,19:21:41.68:207,42,0	1/1:2,12:14:36.63:202,37,0	1/1:1,14:14:14.38:85,14,0	1/1:1,21:22:29.98:112,30,0	1/1:0,10:10:18.44:89,18,0	1/1:1,14:15:42.97:227,43,0	1/1:3,13:16:39.45:217,39,0	1/1:0,2:2:5.37:24,5,0
chr10	58769895	.	A	AT	6843.17	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=2.690;DP=496;FS=0.000;HRun=0;HaplotypeScore=283.7443;InbreedingCoeff=0.8845;MQ=49.39;MQ0=0;MQRankSum=-4.002;QD=14.11;ReadPosRankSum=1.859;VQSLOD=4.8498;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,27:32:79.58:398,80,0	1/1:1,11:12:34.50:192,35,0	0/0:4,0:4:7.09:0,7,37	0/0:7,0:7:14.53:0,15,91	1/1:5,22:27:50.66:258,51,0	1/1:1,14:15:41.29:209,41,0	1/1:1,24:25:67.64:333,68,0	1/1:0,23:23:68.07:447,68,0	1/1:5,17:22:55.81:354,56,0	1/1:2,11:12:26.53:167,27,0	1/1:1,11:12:29.83:133,30,0	1/1:2,23:25:71.29:386,71,0	1/1:3,19:22:59.95:334,60,0	1/1:2,19:21:58.62:303,59,0	1/1:4,25:29:81.87:461,82,0	1/1:3,30:33:94.41:514,94,0	1/1:3,16:19:42.93:251,43,0	1/1:1,8:9:23.66:158,24,0	1/1:1,13:14:41.57:322,42,0	1/1:1,13:14:33.57:224,34,0	1/1:3,19:22:47.57:232,48,0	1/1:2,12:14:39.62:229,40,0	1/1:1,14:14:20.21:122,20,0	1/1:3,21:24:36.17:161,36,0	1/1:0,10:10:22.10:118,22,0	1/1:1,14:15:44.05:271,44,0	1/1:2,13:15:37.98:237,38,0	1/1:0,2:2:5.72:30,6,0
chr10	58770096	.	C	CAT	6557.05	PASS	AB=0.678;AC=33;AF=0.589;AN=56;BaseQRankSum=-1.077;DP=512;FS=10.465;HRun=0;HaplotypeScore=111.8045;InbreedingCoeff=0.5998;MQ=70.28;MQ0=2;MQRankSum=-3.534;QD=20.18;ReadPosRankSum=0.071;VQSLOD=4.8189;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:13,26:39:72.24:1181,72,0	1/1:0,9:9:27.09:443,27,0	0/0:17,0:14:19.75:0,20,203	0/1:28,0:24:18.51:19,0,359	0/1:5,14:21:12.22:489,0,12	0/0:20,0:21:44.97:0,45,536	0/0:22,0:25:62.68:0,63,701	0/1:9,16:26:51.42:728,0,51	1/1:4,1:12:26.92:258,27,0	1/1:3,0:8:18.01:174,18,0	1/1:4,0:9:14.66:114,15,0	0/0:16,1:16:24.08:0,24,297	0/0:22,0:21:57.18:0,57,706	1/1:5,0:13:26.99:236,27,0	1/1:4,1:10:20.96:207,21,0	0/1:11,21:32:11.13:856,0,11	0/1:10,20:30:18.95:733,0,19	0/0:23,0:23:51.16:0,51,632	1/1:5,0:6:12:106,12,0	1/1:12,0:18:21.24:158,21,0	1/1:5,0:6:3.01:33,3,0	0/0:23,0:23:51.04:0,51,612	0/0:14,0:14:33.10:0,33,409	0/0:25,0:25:48.15:0,48,595	1/1:11,0:23:38.99:347,39,0	1/1:12,1:16:17.97:174,18,0	1/1:6,0:12:23.95:200,24,0	1/1:3,1:4:9.01:102,9,0
chr10	58770121	.	AGAGAGAG	A	853.55	PASS	AC=18;AF=0.360;AN=50;BaseQRankSum=5.110;DP=553;FS=0.000;HRun=0;HaplotypeScore=159.5503;InbreedingCoeff=0.8651;MQ=76.38;MQ0=35;MQRankSum=-5.098;QD=8.89;ReadPosRankSum=-1.080;VQSLOD=2.5144;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:70.27:0,70,916	0/0:10,0:10:24.07:0,24,382	0/0:74,0:23:20.49:0,20,387	0/0:69,0:29:25.42:0,25,356	0/0:19,0:18:36.07:0,36,452	0/0:17,0:17:30.57:0,31,524	0/0:24,0:23:48.97:0,49,791	0/0:24,0:24:39.07:0,39,495	1/1:15,0:15:3.01:38,3,0	1/1:12,0:6:15.05:185,15,0	./.	0/0:6,0:6:15.94:0,16,266	0/0:24,0:23:19.09:0,19,953	1/1:17,0:13:9.03:132,9,0	1/1:11,0:9:6.02:96,6,0	0/0:23,0:23:42.13:0,42,692	0/0:26,0:25:57.19:0,57,1340	0/0:26,0:26:19.43:0,19,1224	1/1:7,0:6:9.03:114,9,0	1/1:8,0:8:0.47:1,0,0	./.	0/0:13,0:13:30.07:0,30,511	0/0:18,0:18:33.09:0,33,457	0/0:20,0:20:39.09:0,39,832	./.	1/1:4,4:8:18.06:262,18,0	1/1:14,0:11:11.77:126,12,0	1/1:4,0:2:6.02:76,6,0
chr10	58770128	.	GGAGAGAGGAGAGAGAGAGAGAGA	G	369.33	PASS	AB=0.978;AC=9;AF=0.173;AN=52;BaseQRankSum=4.319;DP=551;FS=0.985;HRun=0;HaplotypeScore=268.6326;InbreedingCoeff=0.1038;MQ=74.47;MQ0=44;MQRankSum=-3.731;QD=4.68;ReadPosRankSum=-1.156;VQSLOD=2.3303;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:31:73.60:0,74,3144	0/0:11,0:11:24.08:0,24,871	0/0:73,0:22:21.35:0,21,384	0/0:66,0:26:38.13:0,38,446	0/0:21,0:19:36.07:0,36,840	0/0:14,0:14:31.04:0,31,1073	0/0:23,0:22:54.59:0,55,1702	0/0:23,0:22:45.09:0,45,1031	1/1:7,7:14:3.48:112,3,0	0/1:15,0:9:87.15:87,0,892	./.	0/0:10,0:9:17.18:0,17,821	0/0:24,0:23:57.66:0,58,2345	0/1:14,0:12:34.47:34,0,52	0/0:8,0:8:2.08:0,2,30	0/0:23,0:23:48.15:0,48,2345	0/0:24,0:23:60.20:0,60,3748	0/0:24,0:24:59.41:0,59,3486	0/1:6,0:5:99:102,0,136	1/1:7,0:7:0.75:2,1,0	./.	0/0:14,0:14:30.55:0,31,1249	0/0:18,0:18:33.09:0,33,1459	0/0:21,0:21:39.09:0,39,2182	0/0:12,0:13:3.01:0,3,38	0/1:8,0:8:92.19:92,0,488	0/1:13,0:10:64.21:64,0,311	0/0:7,0:4:12.04:0,12,442
chr10	58770134	.	AG	A	707.89	PASS	AB=0.835;AC=17;AF=0.327;AN=52;BaseQRankSum=4.788;DP=538;FS=2.522;HRun=2;HaplotypeScore=110.5697;InbreedingCoeff=0.6201;MQ=71.24;MQ0=46;MQRankSum=-5.562;QD=6.74;ReadPosRankSum=-0.043;VQSLOD=0.7444;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,1:30:72.89:0,73,934	0/0:9,0:9:26.98:0,27,321	0/0:67,0:17:20.19:0,20,366	0/0:63,0:24:34.90:0,35,371	0/0:22,0:20:36.07:0,36,447	0/0:13,0:13:30.97:0,31,377	0/0:21,2:23:53.39:0,53,672	0/0:23,0:22:53.61:0,54,604	1/1:8,5:13:2.98:38,3,0	0/1:10,6:9:70.16:164,0,70	./.	0/0:9,1:9:18.85:0,19,196	0/0:20,4:23:19.51:0,20,679	1/1:7,9:12:11.86:118,12,0	1/1:6,3:6:5.85:53,6,0	0/0:18,0:18:45.45:0,45,501	0/0:26,0:25:47.89:0,48,781	0/0:25,0:24:20.77:0,21,695	1/1:1,4:4:11.40:122,11,0	1/1:2,6:8:0.47:1,0,0	0/1:9,0:8:0:0,0,0	0/0:14,0:13:30.06:0,30,360	0/0:17,0:17:33.09:0,33,424	0/0:16,6:22:38.85:0,39,490	./.	1/1:6,2:8:2.84:184,3,0	1/1:3,11:11:3.65:121,4,0	0/1:5,2:4:22.62:64,0,23
chr10	58770135	.	G	GA	672.77	PASS	AB=0.938;AC=14;AF=0.269;AN=52;BaseQRankSum=4.340;DP=560;FS=0.000;HRun=1;HaplotypeScore=117.4044;InbreedingCoeff=0.5010;MQ=69.12;MQ0=46;MQRankSum=-5.655;QD=6.73;ReadPosRankSum=-1.021;VQSLOD=0.0855;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:31:73.46:0,73,933	0/0:10,0:10:26.85:0,27,321	0/0:65,0:15:20.49:0,20,367	0/0:63,0:24:34.90:0,35,371	0/0:24,0:22:36.07:0,36,447	0/0:16,0:16:27.01:0,27,329	0/0:24,0:23:53.71:0,54,649	0/0:26,0:25:49.70:0,50,598	1/1:13,0:13:2.84:38,3,0	0/1:14,4:11:63.85:165,0,64	./.	0/0:11,0:10:17.09:0,17,172	0/0:27,0:26:17:0,17,648	1/1:16,1:13:9.01:100,9,0	1/1:7,2:6:3.01:39,3,0	0/0:18,0:19:47.92:0,48,553	0/0:28,0:27:9.88:0,10,687	0/0:20,1:22:20.53:0,21,686	1/1:7,0:6:11.67:127,12,0	1/1:7,0:7:0.94:2,1,0	0/0:4,5:8:0:0,0,0	0/0:14,0:13:27.93:0,28,333	0/0:21,0:21:33.09:0,33,424	0/0:23,0:23:36.08:0,36,431	./.	0/1:8,0:8:0.58:171,0,1	0/1:13,1:11:9.90:118,0,10	0/1:7,0:4:22.56:64,0,23
chr10	58772369	.	TGGGGGACAGG	T	19457.91	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=17.855;DP=692;FS=7.807;HRun=0;HaplotypeScore=222.0348;InbreedingCoeff=0.9876;MQ=80.32;MQ0=0;MQRankSum=-17.884;QD=67.10;ReadPosRankSum=2.020;VQSLOD=3.8376;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,138,6956	0/0:17,0:17:51.15:0,51,2407	0/0:26,0:26:72.24:0,72,2827	0/0:24,0:24:66.23:0,66,2873	0/0:23,0:23:66.22:0,66,3324	0/0:17,0:17:48.16:0,48,2502	0/0:32,0:32:87.27:0,87,4051	0/0:25,0:25:69.23:0,69,3336	1/1:3,25:28:60.21:1937,60,0	1/1:7,22:29:69.21:2121,69,0	1/1:3,17:20:27.09:872,27,0	0/0:25,0:25:66.22:0,66,3333	0/0:25,0:25:66.19:0,66,3158	1/1:2,22:24:45.15:1453,45,0	1/1:1,31:32:84.29:2712,84,0	0/0:29,0:29:87.30:0,87,4505	0/0:32,0:32:93.29:0,93,4556	1/1:4,13:17:30.10:965,30,0	1/1:2,12:14:36.11:1033,36,0	1/1:4,28:32:60.20:1932,60,0	1/1:2,9:11:12.04:388,12,0	0/0:24,0:24:72.25:0,72,3756	0/0:27,0:27:78.25:0,78,3848	0/0:28,0:28:81.28:0,81,4145	1/1:2,18:20:42.14:1356,42,0	1/1:3,29:32:84.26:2557,84,0	1/1:4,21:25:57.20:1841,57,0	1/1:2,4:6:9.03:291,9,0
chr10	58773016	.	C	CGGGA	3580.06	PASS	AB=0.924;AC=34;AF=0.607;AN=56;BaseQRankSum=2.608;DP=530;FS=8.667;HRun=0;HaplotypeScore=123.1005;InbreedingCoeff=0.4921;MQ=65.54;MQ0=12;MQRankSum=0.951;QD=10.26;ReadPosRankSum=-3.188;VQSLOD=1.3957;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:35,0:34:33.69:380,34,0	1/1:7,0:6:15.47:160,15,0	0/0:14,0:9:13.23:0,13,162	0/1:25,0:14:0.62:1,0,123	1/1:16,0:16:26.82:227,27,0	0/0:20,0:20:41.61:0,42,361	0/0:24,0:28:66.14:0,66,587	1/1:22,0:18:53.83:453,54,0	1/1:7,0:6:0.83:1,1,0	1/1:20,0:20:38.53:316,39,0	1/1:9,0:9:9.47:80,9,0	0/0:22,0:24:47.20:0,47,427	0/0:15,0:21:44.23:0,44,386	1/1:21,0:20:2.44:221,2,0	1/1:16,0:16:18.61:214,19,0	1/1:20,0:20:21.30:321,21,0	0/1:6,28:35:5.87:194,0,6	0/1:14,0:11:24.22:78,0,24	1/1:15,0:14:0.06:140,0,0	1/1:5,0:5:0.47:1,0,0	0/1:23,0:22:15.75:129,0,16	0/0:23,0:26:46.09:0,46,360	0/0:9,0:9:17.84:0,18,152	0/0:31,0:37:75.16:0,75,746	1/1:14,0:14:27.47:237,27,0	0/1:18,0:17:7.73:100,0,8	0/1:23,0:22:14.30:274,0,14	1/1:4,0:4:6.47:53,6,0
chr10	58773019	.	GAGAGAGA	G	92.94	PASS	AB=0.741;AC=3;AF=0.054;AN=56;BaseQRankSum=4.586;DP=523;FS=12.061;HRun=0;HaplotypeScore=137.0805;InbreedingCoeff=0.1764;MQ=64.18;MQ0=14;MQRankSum=-3.295;QD=3.72;ReadPosRankSum=-0.325;VQSLOD=2.0879;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:37:71.02:0,71,921	0/0:6,0:5:11.30:0,11,150	0/0:14,0:9:27.05:0,27,298	0/0:24,0:13:27.07:0,27,262	0/0:12,3:16:17.22:0,17,100	0/0:16,0:16:39.13:0,39,592	0/0:30,0:29:39.28:0,39,1141	0/0:23,0:19:52.16:0,52,491	0/0:6,0:5:2.66:0,3,18	0/0:18,0:18:44.08:0,44,514	0/0:7,0:7:5.42:0,5,23	0/0:24,0:24:57.18:0,57,1042	0/0:22,0:22:51.09:0,51,717	0/0:21,0:20:38.17:0,38,589	0/0:17,0:17:12.69:0,13,153	0/1:13,4:20:99:167,0,100	0/0:35,0:35:33.10:0,33,1093	0/0:14,0:11:0.52:0,1,124	0/0:14,0:13:18.87:0,19,414	1/1:5,0:4:0.47:1,0,0	0/0:23,0:21:38.41:0,38,871	0/0:26,0:25:53.80:0,54,724	0/0:11,0:11:24.08:0,24,423	0/0:39,0:39:88.24:0,88,1748	0/0:10,0:10:13.67:0,14,59	0/0:17,0:16:44.44:0,44,717	0/0:23,0:22:59.99:0,60,1257	0/0:4,0:4:11.51:0,12,130
chr10	58774266	.	GC	G	1107.81	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.056;DP=769;FS=0.000;HRun=4;HaplotypeScore=72.2545;InbreedingCoeff=0.9917;MQ=82.44;MQ0=0;MQRankSum=-3.010;QD=29.94;ReadPosRankSum=0.882;VQSLOD=3.8106;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,135,1880	0/0:14,0:14:42.14:0,42,588	0/0:16,0:17:44.73:0,45,589	0/0:24,0:24:63.01:0,63,809	0/0:33,0:33:99:0,99,1338	0/0:20,0:20:60.19:0,60,825	0/0:33,0:33:90.30:0,90,1259	0/0:30,0:30:87.23:0,87,1138	1/1:1,36:37:99:1203,102,0	0/0:20,0:20:60.20:0,60,840	0/0:11,0:11:33.11:0,33,451	0/0:18,0:18:54.17:0,54,739	0/0:45,0:45:99:0,132,1794	0/0:34,0:34:99:0,99,1349	0/0:31,0:31:93.31:0,93,1302	0/0:27,1:28:48.28:0,48,1098	0/0:32,0:32:90.28:0,90,1242	0/0:14,0:14:39.03:0,39,485	0/0:27,0:27:75.20:0,75,994	0/0:29,0:28:81.25:0,81,1099	0/0:50,0:50:99:0,144,1982	0/0:25,0:25:75.25:0,75,1047	0/0:22,0:22:66.21:0,66,904	0/0:33,0:33:96.32:0,96,1340	0/0:19,0:19:57.19:0,57,798	0/0:40,0:40:99:0,117,1622	0/0:30,0:28:90.21:0,90,1167	0/0:6,0:6:18.06:0,18,252
chr10	58775697	.	T	TCTCTTGG	2442.34	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.449;DP=636;FS=3.936;HRun=0;HaplotypeScore=140.8172;InbreedingCoeff=0.9949;MQ=83.63;MQ0=0;MQRankSum=-7.459;QD=90.46;ReadPosRankSum=-0.621;VQSLOD=4.6059;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,138,3469	0/0:10,0:10:30.10:0,30,779	0/0:14,0:14:33.10:0,33,785	0/0:25,0:25:40.16:0,40,1084	0/0:20,0:20:60.18:0,60,1504	0/0:23,0:23:66.23:0,66,1700	0/0:21,0:21:60.21:0,60,1457	0/0:31,0:31:75.25:0,75,1854	1/1:6,18:27:21.46:2535,21,0	0/0:18,0:18:54.19:0,54,1368	0/0:19,0:19:54.19:0,54,1391	0/0:23,0:23:66.23:0,66,1648	0/0:22,0:22:63.22:0,63,1636	0/0:16,0:16:48.16:0,48,1233	0/0:26,0:26:78.25:0,78,1973	0/0:23,0:23:66.23:0,66,1672	0/0:21,0:21:63.22:0,63,1591	0/0:17,0:17:51.18:0,51,1325	0/0:21,0:21:60.21:0,60,1534	0/0:29,0:29:84.27:0,84,2099	0/0:25,0:25:72.24:0,72,1796	0/0:15,0:15:42.14:0,42,1047	0/0:21,0:21:63.22:0,63,1605	0/0:25,0:25:72.25:0,72,1870	0/0:28,0:28:84.29:0,84,2181	0/0:31,0:31:87.30:0,87,2253	0/0:26,0:26:75.22:0,75,1838	0/0:10,0:10:30.08:0,30,724
chr10	58775805	.	TC	T	10173.23	PASS	AB=0.851;AC=54;AF=0.964;AN=56;BaseQRankSum=-2.917;DP=590;FS=0.000;HRun=3;HaplotypeScore=160.4342;InbreedingCoeff=-0.0336;MQ=70.39;MQ0=0;MQRankSum=-1.636;QD=17.24;ReadPosRankSum=1.117;VQSLOD=4.3790;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:27,1:28:69.17:412,69,0	1/1:7,0:7:20.32:121,20,0	0/1:10,1:10:24.47:24,0,63	0/1:8,2:10:49.49:49,0,83	1/1:20,2:22:61.21:428,61,0	1/1:19,0:19:42.97:349,43,0	1/1:14,1:15:38.98:264,39,0	1/1:21,1:22:49.03:409,49,0	1/1:5,8:13:38.76:355,39,0	1/1:42,0:42:99:885,111,0	1/1:28,0:28:60.83:378,61,0	1/1:14,0:14:33.15:220,33,0	1/1:20,1:21:56.54:446,57,0	1/1:17,0:17:50.07:377,50,0	1/1:16,1:17:43.49:292,43,0	1/1:19,0:19:49.80:329,50,0	1/1:23,0:23:60.79:340,61,0	1/1:27,0:26:67.88:444,68,0	1/1:18,0:18:44.48:339,44,0	1/1:27,0:27:68.83:398,69,0	1/1:15,0:15:37.45:223,37,0	1/1:28,0:28:76.04:486,76,0	1/1:25,0:25:61.55:332,62,0	1/1:13,1:14:40.71:266,41,0	1/1:22,0:22:60.21:423,60,0	1/1:30,0:30:85.69:614,86,0	1/1:37,0:37:91.60:618,92,0	1/1:18,0:18:52.27:353,52,0
chr10	58776817	.	G	GC	1201.29	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.701;DP=861;FS=6.930;HRun=2;HaplotypeScore=93.3549;InbreedingCoeff=0.9919;MQ=87.90;MQ0=0;MQRankSum=-3.705;QD=34.32;ReadPosRankSum=1.081;VQSLOD=3.6105;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:56:99:0,159,1940	0/0:12,0:12:36.11:0,36,446	0/0:26,0:29:72.05:0,72,840	0/0:35,0:36:87.72:0,88,988	0/0:25,0:25:75.20:0,75,897	0/0:28,0:28:81.25:0,81,1003	0/0:30,0:30:81.24:0,81,991	0/0:35,0:35:99:0,99,1156	1/1:2,33:35:90.30:1296,90,0	0/0:28,0:28:78.24:0,78,967	0/0:24,0:24:69.20:0,69,842	0/0:34,0:34:99:0,99,1200	0/0:43,0:43:99:0,126,1534	0/0:40,0:40:99:0,114,1388	0/0:30,0:30:90.27:0,90,1100	0/0:30,0:30:90.28:0,90,1114	0/0:33,0:33:93.29:0,93,1152	0/0:27,0:27:72.23:0,72,892	0/0:22,0:22:54.14:0,54,645	0/0:24,0:24:66.21:0,66,818	0/0:61,0:61:99:0,156,1921	0/0:34,0:34:90.28:0,90,1115	0/0:17,0:17:51.16:0,51,628	0/0:36,0:36:99:0,105,1274	0/0:25,0:25:72.23:0,72,892	0/0:33,0:33:90.27:0,90,1105	0/0:28,0:28:84.25:0,84,1026	0/0:6,0:6:18.06:0,18,223
chr10	58777053	.	T	TA	7594.55	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-11.236;DP=722;FS=0.971;HRun=10;HaplotypeScore=70.6585;InbreedingCoeff=0.9162;MQ=71.04;MQ0=0;MQRankSum=-0.093;QD=22.88;ReadPosRankSum=2.199;VQSLOD=5.7083;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:68.82:0,69,552	0/0:7,0:8:20.01:0,20,154	0/0:16,0:15:19.20:0,19,149	0/0:9,0:9:5.99:0,6,49	0/0:28,0:28:68.87:0,69,563	0/0:32,0:32:92.87:0,93,760	0/0:22,0:22:41.84:0,42,334	0/0:41,0:41:71.68:0,72,739	1/1:3,23:26:63.16:672,63,0	1/1:9,24:33:71.27:754,71,0	1/1:8,22:30:1.26:615,1,0	0/0:31,0:31:77.84:0,78,630	0/0:25,0:25:65.89:0,66,536	1/1:4,20:24:16.87:589,17,0	1/1:3,30:34:77.96:800,78,0	0/0:2,0:29:44.80:0,45,129	0/0:20,0:20:44.87:0,45,361	0/0:32,0:32:52.09:0,52,547	1/1:3,18:21:4.85:462,5,0	1/1:4,31:36:54.97:917,55,0	1/1:3,16:19:42.11:448,42,0	0/0:26,0:30:74.06:0,74,565	0/0:26,0:26:59.89:0,60,493	0/0:16,0:16:35.91:0,36,290	1/1:6,22:28:63.16:672,63,0	1/1:12,24:36:44.59:730,45,0	1/1:7,26:32:40.60:673,41,0	1/1:3,9:12:5.43:263,5,0
chr10	58778230	.	AG	A	12865.39	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=16.536;DP=852;FS=12.734;HRun=2;HaplotypeScore=81.3985;InbreedingCoeff=0.9998;MQ=77.07;MQ0=0;MQRankSum=-1.710;QD=35.74;ReadPosRankSum=3.409;VQSLOD=4.4450;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:64,0:64:99:0,190,2761	0/0:11,0:11:27.09:0,27,404	0/0:13,0:13:39.07:0,39,529	0/0:23,0:23:66.19:0,66,931	0/0:21,0:21:60.19:0,60,879	0/0:17,0:17:45.14:0,45,655	0/0:40,0:40:99:0,117,1750	0/0:37,0:37:99:0,108,1617	0/0:34,0:34:99:0,102,1461	1/1:0,33:33:99:1272,99,0	1/1:1,26:27:69.22:895,69,0	0/0:41,0:41:99:0,120,1741	0/0:34,0:34:99:0,102,1528	1/1:0,33:33:90.29:1168,90,0	1/1:0,36:36:99:1285,99,0	0/0:38,0:38:99:0,111,1663	0/0:35,0:35:99:0,99,1478	1/1:0,23:23:66.21:857,66,0	1/1:1,26:27:78.24:988,78,0	1/1:0,25:25:63.15:797,63,0	1/1:4,59:63:99:2181,169,0	0/0:28,0:28:84.28:0,84,1257	0/0:21,0:21:63.20:0,63,916	0/0:35,0:35:99:0,99,1437	1/1:1,27:28:81.26:1052,81,0	1/1:2,25:27:33.28:929,33,0	1/1:0,24:24:72.23:935,72,0	1/1:0,14:14:39.13:506,39,0
chr10	58778486	.	CCT	C	8406.69	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=14.520;DP=605;FS=17.018;HRun=0;HaplotypeScore=74.4994;InbreedingCoeff=0.9977;MQ=70.19;MQ0=2;MQRankSum=-0.585;QD=30.35;ReadPosRankSum=2.963;VQSLOD=5.5434;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,1:39:67.05:0,67,1633	0/0:8,0:8:18.06:0,18,300	0/0:13,0:13:33.07:0,33,475	0/0:20,0:19:40.80:0,41,617	0/0:22,0:22:54.14:0,54,812	0/0:30,0:30:81.20:0,81,1266	0/0:19,0:19:51.12:0,51,751	0/0:26,0:26:60.14:0,60,904	1/1:1,18:19:54.17:689,54,0	1/1:4,21:25:63.19:791,63,0	1/1:1,13:14:30.10:383,30,0	0/0:21,0:21:54.18:0,54,901	0/0:23,0:23:57.19:0,57,952	1/1:2,20:22:57.18:727,57,0	1/1:4,30:34:75.24:957,75,0	0/0:17,0:17:42.14:0,42,702	0/0:28,0:28:84.27:0,84,1376	1/1:0,14:14:39.12:497,39,0	1/1:5,14:19:42.11:509,42,0	1/1:2,23:25:66.12:804,66,0	1/1:4,30:34:75.24:957,75,0	0/0:24,0:24:60.17:0,60,946	0/0:17,0:17:51.16:0,51,825	0/0:21,0:21:60.21:0,60,1002	1/1:3,20:22:48.15:613,48,0	1/1:3,16:19:42.12:523,42,0	1/1:2,20:21:57.18:727,57,0	1/1:0,7:7:18.06:230,18,0
chr10	58780773	.	T	TC	378.70	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-1.180;DP=491;FS=1.197;HRun=5;HaplotypeScore=131.6314;InbreedingCoeff=0.8713;MQ=67.78;MQ0=0;MQRankSum=-2.753;QD=19.93;ReadPosRankSum=-1.180;VQSLOD=1.8334;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:63.13:0,63,659	0/0:3,0:3:6.01:0,6,64	0/0:35,0:35:96.17:0,96,1007	0/0:27,0:26:72.12:0,72,749	0/0:17,0:17:39.10:0,39,419	0/0:17,0:17:45.11:0,45,483	0/0:22,0:22:57.12:0,57,597	0/0:25,0:25:69.14:0,69,724	1/1:2,17:19:36.12:473,36,0	0/0:18,0:18:41.70:0,42,443	0/0:8,0:8:15.03:0,15,161	0/0:19,0:19:51.06:0,51,526	0/0:13,0:13:30.07:0,30,322	0/0:20,0:20:39.09:0,39,419	0/0:16,0:16:39.03:0,39,404	0/0:24,0:24:66.11:0,66,695	0/0:12,0:12:30.05:0,30,313	0/0:5,0:5:15.04:0,15,161	0/0:15,0:15:36.09:0,36,387	0/0:7,0:7:18.05:0,18,193	0/0:19,0:19:36.08:0,36,380	0/0:17,0:17:39.08:0,39,409	0/0:14,0:14:33.01:0,33,333	0/0:16,0:16:36.08:0,36,379	0/0:21,0:21:51.06:0,51,533	0/0:18,0:18:50.88:0,51,516	0/0:27,0:27:78.18:0,78,829	0/0:11,0:11:29.98:0,30,297
chr10	58782459	.	AAC	A	1492.31	PASS	AB=0.814;AC=12;AF=0.231;AN=52;BaseQRankSum=-4.067;DP=645;FS=5.135;HRun=0;HaplotypeScore=113.0190;InbreedingCoeff=0.6439;MQ=66.76;MQ0=25;MQRankSum=4.024;QD=7.90;ReadPosRankSum=3.871;VQSLOD=2.9650;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:27:11.52:0,12,104	0/1:14,0:14:0:0,0,0	./.	0/0:43,0:21:3.01:0,3,38	0/0:18,0:20:11.67:0,12,95	1/1:14,10:23:15.04:165,15,0	1/1:19,23:42:42.11:463,42,0	0/0:17,0:16:12.01:0,12,138	0/0:16,0:16:2.97:0,3,26	0/0:16,0:20:33.69:0,34,279	0/0:14,0:15:17.94:0,18,163	0/1:9,12:20:37.72:125,0,38	0/0:24,2:25:6.06:0,6,484	0/0:14,0:16:2.99:0,3,23	0/0:20,0:26:11.96:0,12,96	0/0:26,0:25:8.84:0,9,111	0/0:17,0:18:9:0,9,87	0/0:16,0:18:9.02:0,9,99	./.	0/0:15,0:18:17.47:0,17,126	0/0:25,0:32:20.98:0,21,187	1/1:10,6:17:11.86:113,12,0	1/1:4,8:13:17.88:179,18,0	1/1:23,29:56:38.12:610,38,0	0/0:21,0:31:8.12:0,8,110	0/0:15,0:15:17.93:0,18,158	0/0:8,0:10:8.98:0,9,74	0/0:4,0:4:8.91:0,9,71
chr10	58782508	.	CTG	C	214.64	PASS	AB=0.959;AC=3;AF=0.054;AN=56;BaseQRankSum=3.944;DP=720;FS=22.004;HRun=0;HaplotypeScore=141.7450;InbreedingCoeff=0.6340;MQ=62.50;MQ0=37;MQRankSum=-2.736;QD=2.65;ReadPosRankSum=-0.629;VQSLOD=1.2499;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:27:63.03:0,63,1086	0/0:7,0:7:15.05:0,15,260	0/0:68,0:13:31.62:0,32,483	0/1:68,2:28:31.23:31,0,372	0/0:21,0:20:60.15:0,60,1029	0/0:19,0:18:45.15:0,45,792	0/0:40,0:39:90.29:0,90,1535	0/0:24,0:24:66.22:0,66,1127	1/1:2,8:10:21.07:288,21,0	0/0:22,0:21:60.21:0,60,1056	0/0:16,0:14:39.13:0,39,692	0/0:34,0:33:69.02:0,69,1203	0/0:32,0:31:87.28:0,87,1483	0/0:14,0:14:27.09:0,27,478	0/0:27,0:26:63.22:0,63,1113	0/0:18,0:17:45.14:0,45,781	0/0:20,0:20:54.18:0,54,936	0/0:21,0:20:57.20:0,57,1005	0/0:11,0:11:27.09:0,27,479	0/0:19,0:18:48.16:0,48,851	0/0:37,0:34:72.25:0,72,1256	0/0:23,0:23:66.23:0,66,1163	0/0:20,0:20:51:0,51,904	0/0:56,0:56:99:0,129,2272	0/0:20,0:20:35.96:0,36,638	0/0:17,0:16:42.14:0,42,743	0/0:14,0:14:33.11:0,33,576	0/0:9,0:9:21.07:0,21,373
chr10	58782602	.	A	AT	6557.53	PASS	AC=24;AF=0.462;AN=52;BaseQRankSum=17.087;DP=766;FS=4.748;HRun=1;HaplotypeScore=106.9406;InbreedingCoeff=0.9745;MQ=44.81;MQ0=70;MQRankSum=-15.105;QD=29.14;ReadPosRankSum=-0.494;VQSLOD=4.3726;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:59,0:58:99:0,138,1761	0/0:16,0:16:39.13:0,39,506	./.	./.	0/0:18,0:16:45.13:0,45,570	0/0:26,0:25:63.20:0,63,818	0/0:50,0:41:81.04:0,81,1036	0/0:30,0:17:48.16:0,48,622	1/1:3,16:19:33.11:493,33,0	1/1:3,21:24:60.16:853,60,0	1/1:1,12:13:30.10:448,30,0	0/0:44,0:44:99:0,117,1505	0/0:36,0:35:96.31:0,96,1246	1/1:3,18:19:33:419,33,0	1/1:3,18:21:42.14:628,42,0	0/0:24,0:23:69.22:0,69,896	0/0:46,0:43:99:0,108,1401	0/0:29,1:28:21.44:0,21,773	1/1:6,4:4:9.01:113,9,0	1/1:2,17:19:51.13:738,51,0	1/1:11,2:7:6.02:87,6,0	0/0:36,0:36:87.26:0,87,1101	0/0:22,0:22:57:0,57,732	0/0:53,0:53:99:0,123,1540	1/1:1,29:29:78.26:1167,78,0	1/1:2,17:19:36.12:539,36,0	1/1:3,23:26:51.17:758,51,0	1/1:1,9:10:21.07:314,21,0
chr10	58782746	.	ACCAC	A	7084.03	PASS	AB=0.535;AC=21;AF=0.375;AN=56;BaseQRankSum=15.156;DP=630;FS=26.020;HRun=0;HaplotypeScore=114.1984;InbreedingCoeff=0.8909;MQ=48.40;MQ0=30;MQRankSum=-9.094;QD=34.06;ReadPosRankSum=2.538;VQSLOD=3.2097;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,99,2604	0/0:7,0:7:21.07:0,21,514	0/0:18,0:3:6.02:0,6,151	0/0:20,0:5:6:0,6,80	0/0:17,0:17:42.14:0,42,1127	0/0:22,0:22:63.22:0,63,1700	0/0:42,0:40:99:0,111,2861	0/0:20,0:16:42.14:0,42,1058	0/0:24,0:24:60.21:0,60,1552	1/1:3,14:16:36.12:643,36,0	1/1:4,5:5:12.04:228,12,0	0/0:30,0:30:84.75:0,85,2123	0/0:29,0:29:84.23:0,84,2163	1/1:2,31:32:57.01:1080,57,0	1/1:4,24:27:51.17:968,51,0	0/0:27,0:27:81.28:0,81,2045	0/0:41,0:40:99:0,117,2977	0/0:26,0:26:75.26:0,75,1992	1/1:5,10:12:27.09:453,27,0	1/1:1,13:14:36.12:683,36,0	0/1:3,20:23:10.06:478,0,10	0/0:9,0:9:27.09:0,27,728	0/0:12,0:12:36.12:0,36,916	0/0:40,0:40:99:0,114,3040	1/1:3,15:16:36.12:680,36,0	1/1:6,13:17:39.13:736,39,0	1/1:2,20:22:48.16:907,48,0	1/1:1,8:9:12.04:228,12,0
chr10	58783728	.	ACT	A	5185.95	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=12.710;DP=733;FS=0.736;HRun=0;HaplotypeScore=108.7298;InbreedingCoeff=0.9990;MQ=78.04;MQ0=2;MQRankSum=-2.937;QD=33.24;ReadPosRankSum=-0.534;VQSLOD=6.8211;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,38:47:99:1516,117,0	1/1:1,11:12:33.09:410,33,0	0/0:37,0:25:57.14:0,57,910	0/0:49,0:36:72.67:0,73,1103	1/1:6,18:24:66.18:848,66,0	0/0:24,0:24:66.21:0,66,1129	0/0:27,0:27:75.26:0,75,1305	1/1:1,24:25:72.20:926,72,0	0/0:20,0:19:51.17:0,51,888	0/0:38,0:38:99:0,108,1890	0/0:10,0:10:30.10:0,30,525	0/0:18,0:18:54.18:0,54,946	0/0:19,0:19:54.17:0,54,914	0/0:29,0:29:81.26:0,81,1374	0/0:25,0:25:69.22:0,69,1173	0/0:25,0:25:63.22:0,63,1098	1/1:10,20:30:66.20:876,66,0	1/1:3,14:17:45.15:609,45,0	0/0:34,0:34:90.29:0,90,1522	0/0:20,0:20:60.21:0,60,1043	0/0:33,0:33:84.29:0,84,1461	0/0:17,0:17:48.12:0,48,758	0/0:20,0:20:56.21:0,56,918	0/0:33,0:33:78.25:0,78,1323	0/0:25,0:25:75.25:0,75,1282	0/0:40,1:41:73.84:0,74,1904	0/0:25,0:24:69.24:0,69,1201	0/0:8,0:8:21.07:0,21,365
chr10	58783769	.	GTCTGTC	G	1690.69	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=12.072;DP=784;FS=13.818;HRun=0;HaplotypeScore=172.6279;InbreedingCoeff=0.7767;MQ=54.32;MQ0=23;MQRankSum=-9.055;QD=11.91;ReadPosRankSum=1.315;VQSLOD=1.8742;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:44,0:43:5.05:358,5,0	1/1:16,0:16:36.56:405,37,0	0/0:43,0:12:14.79:0,15,318	0/0:55,0:23:32.20:0,32,549	1/1:25,0:24:22.45:248,22,0	0/0:26,0:26:63.20:0,63,1870	0/0:24,0:24:54.17:0,54,1472	0/0:24,0:21:6.01:0,6,86	1/1:4,16:20:30.10:649,30,0	0/0:45,0:43:99:0,99,3085	0/0:14,0:14:30.02:0,30,1002	0/0:21,0:21:51.17:0,51,1492	0/0:31,0:31:75.26:0,75,2448	0/0:28,0:28:72.23:0,72,1993	0/0:30,0:30:81.28:0,81,2625	0/0:20,0:20:48.15:0,48,1396	1/1:24,0:24:6.40:59,6,0	0/1:13,0:11:22.36:138,0,22	0/0:31,0:31:75.19:0,75,2048	0/0:30,0:30:87.30:0,87,2751	0/0:29,0:28:66.23:0,66,1967	0/0:23,0:23:60.20:0,60,1696	0/0:26,0:26:60.21:0,60,1794	0/0:37,0:37:93.32:0,93,2830	0/0:20,0:20:48.16:0,48,1363	0/0:56,0:56:97.20:0,97,4044	0/0:25,0:23:57.19:0,57,1813	0/0:2,0:2:3.01:0,3,101
chr10	58783773	.	GTCTCTGTCTCTGTC	G	6041.46	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=11.672;DP=775;FS=0.998;HRun=0;HaplotypeScore=265.9958;InbreedingCoeff=0.9724;MQ=56.00;MQ0=20;MQRankSum=-7.622;QD=41.67;ReadPosRankSum=-0.654;VQSLOD=3.9647;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:16,28:42:48.16:1571,48,0	1/1:1,15:16:36.59:1366,37,0	0/0:36,0:11:19.31:0,19,548	0/0:55,0:23:29.26:0,29,939	1/1:8,17:25:39.13:1201,39,0	0/0:25,0:25:60.19:0,60,2861	0/0:25,0:25:57.20:0,57,2629	1/1:25,0:22:39.13:918,39,0	0/0:19,0:18:30.10:0,30,575	0/0:44,0:43:99:0,108,5106	0/0:15,0:15:32.39:0,32,1684	0/0:19,0:19:51.18:0,51,2226	0/0:29,0:29:81.28:0,81,4097	0/0:28,0:28:72.25:0,72,3102	0/0:29,0:29:81.28:0,81,4868	0/0:19,0:19:48.15:0,48,2497	1/1:7,16:23:15.02:310,15,0	1/1:5,7:10:21.07:675,21,0	0/0:30,0:30:66.22:0,66,3403	0/0:33,0:33:96.32:0,96,4748	0/0:29,0:28:69.21:0,69,3414	0/0:22,0:22:60.19:0,60,2466	0/0:25,0:25:63.22:0,63,2726	0/0:41,0:41:99:0,105,4916	0/0:22,0:22:54.19:0,54,2571	0/0:54,1:55:20.14:0,20,6711	0/0:25,0:23:57.20:0,57,3246	0/0:3,0:3:6.02:0,6,217
chr10	58783785	.	GTC	G	751.14	PASS	AB=0.905;AC=11;AF=0.196;AN=56;BaseQRankSum=12.896;DP=755;FS=12.939;HRun=0;HaplotypeScore=122.5067;InbreedingCoeff=0.6266;MQ=60.62;MQ0=14;MQRankSum=-8.634;QD=5.14;ReadPosRankSum=1.300;VQSLOD=2.5644;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:37,1:36:5.89:102,0,6	1/1:15,0:15:25.09:95,25,0	0/0:38,0:21:52.06:0,52,830	0/0:63,0:29:38.61:0,39,732	1/1:24,0:24:10.16:155,10,0	0/0:25,0:25:66.23:0,66,1163	0/0:26,0:26:69.24:0,69,1196	0/1:13,7:19:31.13:361,0,31	0/1:19,0:18:50.74:51,0,67	0/0:38,0:38:99:0,114,1963	0/0:18,0:18:48.15:0,48,845	0/0:17,0:17:48.16:0,48,834	0/0:28,0:28:84.29:0,84,1487	0/0:25,0:25:72.22:0,72,1215	0/0:27,0:27:81.28:0,81,1437	0/0:18,0:18:48.15:0,48,823	1/1:19,0:19:5.89:56,6,0	1/1:10,1:9:15.43:93,15,0	0/0:30,0:28:66.19:0,66,1110	0/0:39,0:39:99:0,114,1969	0/0:30,0:29:84.24:0,84,1364	0/0:28,0:28:72.25:0,72,1241	0/0:27,0:27:75.23:0,75,1266	0/0:37,0:37:99:0,108,1871	0/0:18,0:18:51.16:0,51,864	0/0:55,0:55:99:0,144,2657	0/0:19,0:18:57.18:0,57,981	0/0:2,0:2:6.02:0,6,106
chr10	58786236	.	A	AAGAG	369.08	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=6.135;DP=372;FS=10.998;HRun=0;HaplotypeScore=113.6968;InbreedingCoeff=0.3959;MQ=41.02;MQ0=8;MQRankSum=-3.994;QD=9.23;ReadPosRankSum=-1.727;VQSLOD=1.6993;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,10:10:6.02:159,6,0	0/1:4,0:3:7.16:13,0,7	0/0:11,0:4:9.03:0,9,159	0/0:21,0:10:24.02:0,24,330	1/1:7,0:5:10.91:75,11,0	0/0:21,0:21:53.38:0,53,660	0/0:16,0:16:38.91:0,39,548	0/1:11,0:7:14.44:121,0,14	0/0:10,0:8:24.08:0,24,433	0/0:24,0:20:28.19:0,28,247	0/0:11,0:11:5.38:0,5,64	0/0:15,0:14:33.50:0,33,515	0/0:9,0:9:26.98:0,27,376	0/0:11,0:11:12.38:0,12,82	0/0:10,0:10:13.61:0,14,125	0/0:9,0:7:15.02:0,15,215	0/1:8,0:7:16.36:131,0,16	0/0:7,0:7:3.45:0,3,22	0/0:12,0:10:12.36:0,12,90	0/0:23,0:23:25.56:0,26,231	0/0:10,0:7:9.80:0,10,64	0/0:16,0:16:36.92:0,37,522	0/0:18,0:17:43.77:0,44,655	0/0:16,0:16:39.02:0,39,530	0/0:24,0:24:47.95:0,48,308	0/0:21,0:20:29.51:0,30,265	0/0:11,0:11:10.10:0,10,91	0/0:5,0:5:8.89:0,9,60
chr10	58786652	.	CA	C	2609.96	PASS	AB=0.939;AC=41;AF=0.732;AN=56;BaseQRankSum=1.918;DP=371;FS=5.739;HRun=1;HaplotypeScore=111.7371;InbreedingCoeff=0.4834;MQ=78.88;MQ0=0;MQRankSum=-4.672;QD=8.53;ReadPosRankSum=2.495;VQSLOD=1.2386;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:42.14:0,42,627	0/0:3,0:3:5.97:0,6,63	0/1:8,7:16:22.40:22,0,45	0/1:15,0:15:42.92:43,0,51	0/0:17,0:17:39.10:0,39,555	1/1:6,0:6:15.18:65,15,0	1/1:21,0:21:50.94:235,51,0	0/0:21,0:21:63.18:0,63,872	1/1:6,0:6:14.16:70,14,0	1/1:15,0:15:9.16:105,9,0	1/1:14,1:15:33.06:183,33,0	1/1:10,1:11:12.03:132,12,0	1/1:18,0:18:30.61:208,31,0	0/1:8,0:8:16.88:44,0,17	1/1:16,0:16:23.12:169,23,0	1/1:19,0:19:52.33:248,52,0	0/0:8,0:8:21.07:0,21,313	0/1:6,0:6:4.33:44,0,4	0/1:16,0:14:26.61:66,0,27	1/1:15,0:15:32.97:161,33,0	1/1:4,0:4:2.16:7,2,0	1/1:16,0:16:25.81:138,26,0	1/1:10,2:12:14.06:154,14,0	1/1:8,0:8:13.65:66,14,0	1/1:22,0:22:40.61:250,41,0	1/1:16,0:16:18.96:139,19,0	1/1:23,0:22:22.72:224,23,0	1/1:2,0:2:5.17:22,5,0
chr10	58789378	.	G	GCCT	1502.48	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-7.090;DP=698;FS=0.769;HRun=0;HaplotypeScore=96.9040;InbreedingCoeff=0.9684;MQ=86.81;MQ0=0;MQRankSum=-2.376;QD=53.66;ReadPosRankSum=0.411;VQSLOD=5.3152;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,120,1960	0/0:4,0:4:12.04:0,12,196	0/0:23,0:24:43.67:0,44,678	0/0:24,0:24:54.18:0,54,849	0/0:30,0:30:78.25:0,78,1249	0/0:29,0:28:78.23:0,78,1224	0/0:28,0:28:75.26:0,75,1223	0/0:38,0:38:99:0,102,1622	0/0:27,0:27:65.25:0,65,1030	0/0:23,0:23:57.19:0,57,920	0/0:23,0:23:57.18:0,57,907	0/0:9,0:9:24.08:0,24,392	0/0:21,0:21:57.18:0,57,907	0/0:26,0:26:72.23:0,72,1151	0/0:22,0:22:66.22:0,66,1055	1/1:4,23:28:72.25:1597,72,0	0/0:34,0:34:99:0,102,1666	0/0:19,0:19:57.12:0,57,863	0/0:21,0:21:63.22:0,63,1028	0/0:24,0:24:69.22:0,69,1102	0/0:30,0:30:90.29:0,90,1445	0/0:19,0:19:54.18:0,54,881	0/0:18,0:18:51.17:0,51,833	0/0:31,0:31:90.22:0,90,1400	0/0:30,0:30:90.31:0,90,1470	0/0:26,0:26:78.27:0,78,1273	0/0:27,0:27:78.24:0,78,1223	0/0:18,0:18:48.15:0,48,759
chr10	58790780	.	TCTC	T	4892.21	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=13.752;DP=638;FS=0.392;HRun=0;HaplotypeScore=99.8647;InbreedingCoeff=0.9981;MQ=82.92;MQ0=0;MQRankSum=-4.463;QD=39.77;ReadPosRankSum=-1.878;VQSLOD=4.8857;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,39:42:99:1674,102,0	1/1:0,8:8:18.06:307,18,0	0/0:20,0:22:52.28:0,52,1006	0/0:23,0:23:53.96:0,54,1002	1/1:1,19:20:50.98:731,51,0	0/0:15,0:15:45.15:0,45,1027	0/0:23,0:23:66.21:0,66,1424	1/1:3,29:32:87.20:1363,87,0	0/0:20,0:20:54.19:0,54,1225	0/0:28,0:28:84.29:0,84,1891	0/0:13,0:13:39.13:0,39,889	0/0:24,0:24:63.19:0,63,1334	0/0:26,0:26:72.25:0,72,1651	0/0:21,0:21:63.22:0,63,1451	0/0:20,0:20:57.20:0,57,1312	0/0:26,0:26:78.25:0,78,1679	1/1:1,20:21:48.16:818,48,0	0/0:19,0:19:57.17:0,57,1259	0/0:19,0:19:51.16:0,51,1132	0/0:22,0:22:66.20:0,66,1413	0/0:25,0:25:63.20:0,63,1374	0/0:29,0:29:84.27:0,84,1883	0/0:19,0:19:54.19:0,54,1236	0/0:23,0:23:66.23:0,66,1521	0/0:22,0:22:66.20:0,66,1423	0/0:33,0:33:93.31:0,93,2070	0/0:27,0:27:81.26:0,81,1783	0/0:16,0:16:45.15:0,45,1010
chr10	58791069	.	A	AGAAG	958.23	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.104;DP=608;FS=8.699;HRun=0;HaplotypeScore=105.2473;InbreedingCoeff=0.9956;MQ=83.18;MQ0=0;MQRankSum=-1.304;QD=68.45;ReadPosRankSum=-0.401;VQSLOD=5.5470;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,144,2995	0/0:11,0:11:30.10:0,30,629	0/0:20,0:20:21.69:0,22,853	0/0:17,0:17:41.73:0,42,790	0/0:18,0:18:54.19:0,54,1132	0/0:20,0:19:57.18:0,57,1129	0/0:22,0:22:66.21:0,66,1306	0/0:28,0:28:75.24:0,75,1466	0/0:29,0:29:87.28:0,87,1783	0/0:30,0:30:87.25:0,87,1734	0/0:15,0:15:45.14:0,45,891	0/0:22,0:22:66.23:0,66,1369	0/0:21,0:21:63.22:0,63,1319	0/0:29,0:29:87.28:0,87,1784	0/0:19,0:19:54.17:0,54,1094	1/1:3,10:14:41.35:1053,41,0	0/0:24,0:24:63.19:0,63,1280	0/0:13,0:13:36.59:0,37,732	0/0:14,0:14:42.14:0,42,881	0/0:22,0:22:63.19:0,63,1230	0/0:38,0:38:99:0,105,2133	0/0:13,0:13:39.10:0,39,727	0/0:15,0:15:42.14:0,42,881	0/0:25,0:25:72.25:0,72,1465	0/0:17,0:17:51.18:0,51,1056	0/0:28,0:28:84.28:0,84,1725	0/0:19,0:18:57.20:0,57,1191	0/0:13,0:13:39.04:0,39,694
chr10	58791133	.	CCTT	C	2553.53	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=10.057;DP=566;FS=8.667;HRun=0;HaplotypeScore=110.6757;InbreedingCoeff=0.6801;MQ=56.82;MQ0=5;MQRankSum=-8.744;QD=17.25;ReadPosRankSum=-0.884;VQSLOD=2.8310;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:34,6:40:91.57:1114,92,0	1/1:7,0:7:11.71:118,12,0	0/0:20,0:9:15.05:0,15,230	0/0:30,0:18:41.97:0,42,652	1/1:9,6:15:29.83:291,30,0	0/0:18,0:17:51.17:0,51,1054	0/0:24,0:24:66.21:0,66,1317	0/1:29,0:28:34.33:479,0,34	0/0:22,0:22:60.19:0,60,1124	0/0:25,0:25:72.25:0,72,1535	0/0:12,0:12:36.12:0,36,771	0/0:23,0:23:63.19:0,63,1190	0/0:11,0:11:30.10:0,30,611	0/0:25,0:25:72.23:0,72,1421	0/0:15,0:15:36.12:0,36,770	1/1:27,1:27:46.58:623,47,0	0/1:15,0:15:4.28:76,0,4	0/1:14,0:14:22.55:23,0,662	0/0:9,0:8:21.06:0,21,315	0/0:17,0:17:47.37:0,47,984	0/0:41,0:41:99:0,103,2140	0/0:29,0:29:87.30:0,87,1793	0/0:13,0:13:39.12:0,39,768	0/0:24,0:24:65.44:0,65,1372	0/0:24,0:24:66.23:0,66,1388	0/0:15,0:15:39.12:0,39,793	0/0:17,0:16:45.13:0,45,922	0/0:4,0:4:12.01:0,12,167
chr10	58791136	.	T	TC	3910.78	PASS	AB=0.804;AC=12;AF=0.214;AN=56;BaseQRankSum=8.671;DP=561;FS=7.342;HRun=1;HaplotypeScore=87.1261;InbreedingCoeff=0.7760;MQ=55.15;MQ0=5;MQRankSum=-9.981;QD=26.07;ReadPosRankSum=-0.541;VQSLOD=2.8574;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:17,21:38:84.46:1253,84,0	1/1:0,0:6:12.04:158,12,0	0/0:18,0:7:15.04:0,15,195	0/0:30,0:17:41.80:0,42,510	1/1:7,9:16:29.97:356,30,0	0/0:18,0:17:54.17:0,54,688	0/0:24,0:24:69.20:0,69,866	0/1:16,15:29:11.08:727,0,11	0/0:21,0:21:63.18:0,63,791	0/0:26,0:26:75.24:0,75,964	0/0:13,0:13:36.12:0,36,467	0/0:21,0:21:63.18:0,63,789	0/0:11,0:11:33.09:0,33,412	0/0:24,0:24:72.22:0,72,920	0/0:16,0:16:39.12:0,39,493	1/1:3,27:29:76.38:1164,76,0	1/1:4,0:15:14.36:201,14,0	0/1:13,1:14:52.57:53,0,386	0/0:8,0:7:21.06:0,21,262	0/0:17,0:17:48.09:0,48,602	0/0:39,2:41:97.24:0,97,1393	0/0:29,0:29:87.28:0,87,1128	0/0:13,0:13:39.11:0,39,498	0/0:22,0:23:61.92:0,62,815	0/0:23,0:23:66.21:0,66,857	0/0:13,0:13:39.12:0,39,494	0/0:16,0:15:45.12:0,45,558	0/0:4,0:4:12.01:0,12,139
chr10	58791158	.	TCCCA	T	2598.72	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=14.034;DP=524;FS=6.265;HRun=0;HaplotypeScore=111.6320;InbreedingCoeff=0.9280;MQ=51.11;MQ0=4;MQRankSum=-11.325;QD=22.02;ReadPosRankSum=-1.830;VQSLOD=2.8199;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,10:29:72.51:828,73,0	1/1:4,0:4:11.73:96,12,0	0/0:17,0:5:14.98:0,15,240	0/0:27,0:9:24.55:0,25,450	1/1:15,3:18:36.93:384,37,0	0/0:18,0:18:54.16:0,54,1208	0/0:22,0:22:15.49:0,15,1313	1/1:18,9:26:23.52:680,24,0	0/0:17,0:17:51.11:0,51,1154	0/0:30,0:30:87.29:0,87,2047	0/0:11,0:11:33.04:0,33,680	0/0:22,0:22:66.23:0,66,1468	0/0:15,0:15:45.14:0,45,958	0/0:22,0:22:66.20:0,66,1616	0/0:17,0:17:51.16:0,51,1196	1/1:29,1:29:40.13:676,40,0	1/1:10,0:10:0.20:111,0,0	0/0:13,0:13:32.21:0,32,737	0/0:8,0:7:21.05:0,21,365	0/0:16,0:16:45.15:0,45,1162	0/0:36,0:36:99:0,102,2464	0/0:28,0:28:84.26:0,84,2059	0/0:10,0:10:27.08:0,27,578	0/0:22,0:22:41.31:0,41,1455	0/0:21,0:20:60.15:0,60,1331	0/0:11,0:11:33.11:0,33,774	0/0:18,0:17:54.14:0,54,1163	0/0:5,0:5:15.05:0,15,277
chr10	58791159	.	CCCAT	C	2095.77	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=14.089;DP=522;FS=8.375;HRun=0;HaplotypeScore=113.2818;InbreedingCoeff=0.9422;MQ=51.22;MQ0=4;MQRankSum=-10.636;QD=17.76;ReadPosRankSum=-1.442;VQSLOD=2.2057;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:29:51.98:623,52,0	1/1:4,0:4:6.98:70,7,0	0/0:17,0:5:14.83:0,15,237	0/0:24,0:7:18.46:0,18,361	1/1:18,0:18:35.76:402,36,0	0/0:17,0:17:48.11:0,48,940	0/0:21,0:21:34.41:0,34,988	1/1:27,0:26:62.06:583,62,0	0/0:17,0:17:48.13:0,48,1072	0/0:31,0:31:87.22:0,87,1838	0/0:11,0:11:24.06:0,24,509	0/0:22,0:22:66.18:0,66,1443	0/0:15,0:15:45.12:0,45,942	0/0:21,0:21:60.19:0,60,1407	0/0:18,0:18:54.15:0,54,1171	1/1:25,5:29:8.49:550,8,0	1/1:10,0:10:8.85:44,9,0	0/0:13,0:13:15.08:0,15,606	0/0:8,0:7:18.01:0,18,290	0/0:17,0:17:48.15:0,48,1044	0/0:36,0:36:99:0,99,2231	0/0:28,0:28:79.49:0,79,1791	0/0:11,0:11:24.97:0,25,483	0/0:22,0:22:58.73:0,59,1181	0/0:20,0:19:56.77:0,57,1126	0/0:12,0:12:36.11:0,36,810	0/0:18,0:17:51.14:0,51,1012	0/0:5,0:5:15.05:0,15,315
chr10	58791164	.	CCTT	C	97.32	PASS	AB=0.925;AC=4;AF=0.071;AN=56;BaseQRankSum=4.756;DP=519;FS=5.516;HRun=0;HaplotypeScore=108.7086;InbreedingCoeff=-0.0754;MQ=51.10;MQ0=7;MQRankSum=-2.327;QD=1.54;ReadPosRankSum=-0.440;VQSLOD=1.8244;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:30,1:31:94.27:94,0,417	0/1:3,0:3:24.43:24,0,41	0/0:18,0:5:14.95:0,15,239	0/0:25,0:7:17.71:0,18,401	0/1:12,7:19:76.59:77,0,168	0/0:17,0:17:48.13:0,48,968	0/0:20,0:20:60.19:0,60,1248	0/0:26,1:25:43.50:0,43,433	0/0:19,0:19:54.16:0,54,1130	0/0:30,0:30:87.25:0,87,1834	0/0:10,0:10:30.06:0,30,596	0/0:20,0:20:60.20:0,60,1338	0/0:15,0:15:45.15:0,45,1010	0/0:20,0:20:60.21:0,60,1385	0/0:21,0:20:60.20:0,60,1290	0/0:29,0:28:81.11:0,81,873	0/1:10,0:10:7:7,0,80	0/0:13,0:13:36.01:0,36,690	0/0:7,0:6:18.06:0,18,342	0/0:17,0:17:51.07:0,51,1071	0/0:34,0:34:99:0,99,2149	0/0:30,0:30:86.97:0,87,1862	0/0:10,0:10:29.89:0,30,560	0/0:21,0:21:57.20:0,57,1234	0/0:20,0:19:57.19:0,57,1248	0/0:11,0:11:33.11:0,33,742	0/0:17,0:17:51.16:0,51,1071	0/0:5,0:5:15.05:0,15,345
chr10	58791574	.	ATG	A	1258.14	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.214;DP=763;FS=5.555;HRun=0;HaplotypeScore=88.9782;InbreedingCoeff=0.9881;MQ=83.21;MQ0=0;MQRankSum=-2.745;QD=35.95;ReadPosRankSum=0.172;VQSLOD=5.2831;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,129,2404	0/0:8,0:8:21.07:0,21,393	0/0:25,0:25:66.16:0,66,971	0/0:19,0:19:57.10:0,57,834	0/0:36,0:36:96.06:0,96,1760	0/0:25,0:25:75.23:0,75,1327	0/0:28,0:28:75.26:0,75,1397	0/0:36,0:36:99:0,105,1944	0/0:30,0:30:87.30:0,87,1612	0/0:40,0:40:99:0,117,2119	0/0:17,0:17:51.17:0,51,942	0/0:34,0:34:99:0,99,1828	0/0:18,0:18:51.17:0,51,947	0/0:23,0:23:69.24:0,69,1262	0/0:42,0:42:99:0,117,2159	1/1:1,34:35:43.13:1353,43,0	0/0:21,0:21:60.21:0,60,1111	0/0:21,0:21:63.15:0,63,1094	0/0:24,0:24:66.23:0,66,1230	0/0:31,0:31:90.31:0,90,1677	0/0:40,0:40:99:0,120,2222	0/0:29,0:29:87.30:0,87,1612	0/0:21,0:21:60.21:0,60,1114	0/0:20,0:20:54.18:0,54,995	0/0:18,0:18:48.16:0,48,876	0/0:33,0:33:99:0,99,1840	0/0:31,0:31:87.30:0,87,1608	0/0:9,0:9:18.06:0,18,337
chr10	58791795	.	G	GATTAGGGC	14257.28	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=3.405;DP=763;FS=1.139;HRun=0;HaplotypeScore=188.2352;InbreedingCoeff=0.9994;MQ=79.66;MQ0=0;MQRankSum=-13.534;QD=85.89;ReadPosRankSum=-1.686;VQSLOD=4.3734;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,16:34:57.15:2138,57,0	1/1:2,11:16:39.13:1696,39,0	0/0:35,0:35:89.37:0,89,2123	0/0:27,0:25:56.33:0,56,1542	1/1:6,21:35:75.02:2856,75,0	0/0:19,0:19:54.15:0,54,1437	0/0:28,0:28:78.22:0,78,2014	1/1:4,9:34:98.85:2966,99,0	0/0:33,0:33:96.29:0,96,2595	0/0:34,0:34:99:0,102,2663	0/0:17,0:17:51.18:0,51,1479	0/0:25,0:25:75.26:0,75,2102	0/0:34,0:34:99:0,102,2860	0/0:32,0:32:90.25:0,90,2275	0/0:44,0:44:99:0,123,3136	1/1:3,25:34:81.28:3557,81,0	1/1:2,8:13:27.09:1044,27,0	0/0:22,0:22:63.09:0,63,1439	0/0:29,0:29:81.25:0,81,1962	0/0:33,0:33:93.27:0,93,2466	0/0:31,0:31:87.24:0,87,2252	0/0:21,0:21:57.20:0,57,1669	0/0:18,0:18:54.18:0,54,1507	0/0:30,0:30:84.22:0,84,2245	0/0:35,0:35:99:0,105,2826	0/0:20,0:20:57.18:0,57,1529	0/0:22,0:22:66.21:0,66,1867	0/0:8,0:8:24.08:0,24,703
chr10	58792034	.	ACTT	A	10860.53	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=4.666;DP=640;FS=12.305;HRun=0;HaplotypeScore=103.9236;InbreedingCoeff=0.9954;MQ=81.87;MQ0=0;MQRankSum=-7.469;QD=44.15;ReadPosRankSum=2.459;VQSLOD=6.4251;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:96.33:0,96,2266	0/0:9,0:9:27.09:0,27,582	0/0:21,0:21:57.19:0,57,1286	0/0:17,0:17:51.07:0,51,1126	0/0:28,0:28:81.28:0,81,1901	0/0:24,0:24:72.25:0,72,1677	0/0:19,0:19:57.20:0,57,1323	0/0:38,0:38:99:0,114,2693	0/0:22,0:22:66.23:0,66,1540	1/1:1,27:28:75.26:1322,75,0	1/1:1,18:19:39.13:688,39,0	0/0:31,0:31:93.31:0,93,2122	0/0:26,0:26:78.27:0,78,1842	1/1:0,22:22:57.20:1005,57,0	1/1:1,29:30:72.25:1251,72,0	0/0:15,0:15:45.15:0,45,1061	0/0:19,0:19:57.20:0,57,1344	0/0:26,0:26:78.27:0,78,1845	1/1:4,14:18:39.12:661,39,0	1/1:0,26:26:72.25:1258,72,0	1/1:0,13:13:33.11:579,33,0	0/0:29,0:29:87.29:0,87,2003	0/0:18,0:18:54.19:0,54,1234	0/0:20,0:20:60.15:0,60,1319	1/1:1,22:23:54.19:952,54,0	1/1:0,34:34:99:1682,99,0	1/1:1,27:28:72.25:1250,72,0	1/1:0,5:5:12.04:212,12,0
chr10	58792597	.	GC	G	5295.66	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=11.506;DP=687;FS=0.000;HRun=3;HaplotypeScore=74.1461;InbreedingCoeff=0.9982;MQ=79.65;MQ0=0;MQRankSum=-1.398;QD=31.52;ReadPosRankSum=0.020;VQSLOD=4.7066;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,30:30:75.24:928,75,0	1/1:1,6:7:18.06:219,18,0	0/0:16,0:16:34.81:0,35,484	0/0:22,0:22:35.57:0,36,600	1/1:2,15:17:33.10:405,33,0	0/0:22,0:21:63.20:0,63,888	0/0:31,0:31:93.30:0,93,1320	1/1:3,20:23:57.17:693,57,0	1/1:1,25:26:63.20:781,63,0	0/0:25,0:25:75.25:0,75,1066	0/0:10,0:10:30.09:0,30,409	0/0:32,0:32:96.32:0,96,1379	0/0:32,0:32:93.31:0,93,1334	0/0:28,0:28:81.74:0,82,1167	0/0:27,0:27:78.24:0,78,1100	0/0:16,0:16:48.16:0,48,691	1/1:0,35:35:99:1227,99,0	1/1:0,30:30:84.26:1041,84,0	0/0:24,0:24:69.23:0,69,993	0/0:22,0:22:63.15:0,63,860	0/0:46,0:46:99:0,132,1877	0/0:26,0:26:75.24:0,75,1049	0/0:18,0:18:54.16:0,54,755	0/0:39,0:39:99:0,108,1532	0/0:19,0:19:57.18:0,57,803	0/0:27,0:27:81.27:0,81,1162	0/0:26,0:26:78.23:0,78,1081	0/0:11,0:11:30.10:0,30,432
chr10	58792895	.	TTG	T	1256.42	PASS	AB=0.874;AC=28;AF=0.538;AN=52;BaseQRankSum=0.104;DP=576;FS=3.090;HRun=0;HaplotypeScore=90.0275;InbreedingCoeff=0.1391;MQ=63.75;MQ0=7;MQRankSum=0.944;QD=3.29;ReadPosRankSum=3.175;VQSLOD=1.6920;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:0.47:0,0,1	./.	1/1:22,0:14:0.89:2,1,0	./.	0/0:23,0:23:8.30:0,8,38	0/0:24,0:23:33.08:0,33,447	0/1:19,3:22:89.62:90,0,213	0/1:33,0:32:4.68:11,0,5	0/0:8,0:15:9.01:0,9,98	0/1:17,3:20:11.70:12,0,148	0/1:9,4:14:63.91:64,0,74	0/1:15,2:17:11.36:11,0,226	0/1:10,0:12:11.30:40,0,11	1/1:15,6:21:6.48:65,6,0	1/1:14,1:19:17.48:116,17,0	0/0:17,0:17:17.04:0,17,140	0/0:18,0:17:5.56:0,6,30	0/0:32,0:32:34.10:0,34,295	1/1:15,0:17:5.80:34,6,0	0/1:9,3:12:20.92:53,0,21	1/1:35,2:37:20.62:156,21,0	0/1:14,1:15:52.80:53,0,100	0/1:22,2:24:11.41:11,0,275	1/1:19,15:33:24.53:260,25,0	1/1:13,2:17:20.55:169,21,0	1/1:14,1:15:16.49:136,16,0	0/1:13,2:16:9.10:75,0,9	1/1:8,2:10:6.01:65,6,0
chr10	58792938	.	T	TGCGCGCGC	762.18	PASS	AC=8;AF=0.148;AN=54;BaseQRankSum=2.185;DP=585;FS=7.873;HRun=0;HaplotypeScore=152.6662;InbreedingCoeff=0.7970;MQ=60.64;MQ0=16;MQRankSum=-1.948;QD=9.41;ReadPosRankSum=-4.056;VQSLOD=0.8314;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:28,2:30:5.32:119,5,0	./.	0/0:31,0:20:56:0,56,1427	0/0:29,0:15:42.58:0,43,1068	1/1:4,18:22:6.02:158,6,0	0/0:24,0:23:54.15:0,54,1362	0/0:26,0:26:49.67:0,50,1547	1/1:14,0:12:22.68:271,23,0	0/0:16,0:14:23.88:0,24,427	0/0:26,0:26:72.20:0,72,1875	0/0:18,0:18:39.11:0,39,919	0/0:19,0:19:54.16:0,54,1376	0/0:15,0:14:6.35:0,6,647	0/0:15,0:15:26.94:0,27,651	0/0:17,0:17:3.03:0,3,868	0/0:24,0:23:15.54:0,16,170	1/1:14,1:14:12.04:354,12,0	0/0:33,0:33:20.78:0,21,338	0/0:16,0:16:15.93:0,16,777	0/0:16,0:16:42.13:0,42,1059	0/0:33,0:33:2.55:0,3,1463	0/0:16,0:16:39.13:0,39,1046	0/0:18,0:17:33.22:0,33,944	0/0:29,0:28:51.18:0,51,1234	0/0:20,0:18:48.16:0,48,1232	0/0:25,0:23:19.41:0,19,1270	0/0:23,0:23:38.97:0,39,1507	0/0:12,0:12:29.97:0,30,728
chr10	58792940	.	T	TGTGC	1179.22	PASS	AB=0.797;AC=12;AF=0.222;AN=54;BaseQRankSum=5.248;DP=585;FS=11.775;HRun=0;HaplotypeScore=120.7809;InbreedingCoeff=0.8119;MQ=61.97;MQ0=16;MQRankSum=-5.126;QD=6.98;ReadPosRankSum=-2.148;VQSLOD=1.3888;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:11,0:35:1.33:72,0,1	./.	0/0:32,0:21:53.05:0,53,577	0/0:30,0:16:44.41:0,44,461	1/1:18,0:18:10.96:70,11,0	0/0:23,0:22:51.01:0,51,681	0/0:25,0:25:68.81:0,69,714	1/1:21,0:19:21.94:169,22,0	0/1:16,0:14:67.46:67,0,136	0/0:26,0:26:66.84:0,67,624	0/0:17,0:17:39.01:0,39,431	0/0:19,0:19:51:0,51,583	0/0:14,0:13:29.94:0,30,278	0/0:13,0:13:17.20:0,17,191	0/0:16,0:16:42.46:0,42,408	1/1:5,19:24:10.21:184,10,0	1/1:6,0:18:17.92:171,18,0	1/1:6,20:35:34.14:621,34,0	0/0:15,0:15:33.54:0,34,303	0/0:16,0:16:41.86:0,42,371	0/0:31,0:31:65.89:0,66,595	0/0:16,0:16:41.49:0,41,445	0/0:15,0:14:35.92:0,36,447	0/0:29,0:28:51:0,51,541	0/0:21,0:19:48.03:0,48,511	0/0:22,0:21:53.12:0,53,481	0/0:23,0:23:60.85:0,61,481	0/0:9,0:9:26.90:0,27,241
chr10	58793315	.	G	GGA	6956.55	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-15.462;DP=628;FS=1.176;HRun=0;HaplotypeScore=72.1499;InbreedingCoeff=0.9914;MQ=86.70;MQ0=1;MQRankSum=-2.769;QD=44.59;ReadPosRankSum=1.751;VQSLOD=6.4697;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,37:38:93.32:1649,93,0	1/1:1,6:6:15.05:266,15,0	0/0:17,0:17:45.15:0,45,615	0/0:26,0:26:57.60:0,58,788	1/1:3,13:16:39.13:692,39,0	0/0:12,0:12:33.10:0,33,438	0/0:27,0:27:66.22:0,66,906	1/1:2,28:31:87.28:1488,87,0	1/1:2,20:22:57.19:998,57,0	0/0:27,0:27:66.21:0,66,891	0/0:28,0:28:84.27:0,84,1136	0/0:13,0:13:39.13:0,39,536	0/0:26,0:26:72.24:0,72,989	0/0:22,0:22:63.21:0,63,866	0/0:20,0:20:57.16:0,57,749	1/1:2,17:19:51.17:905,51,0	1/1:1,22:23:54.19:958,54,0	0/0:30,0:30:84.25:0,84,1121	0/0:19,0:19:48.13:0,48,637	0/0:19,0:19:48.16:0,48,660	0/0:39,0:39:99:0,105,1424	0/0:22,0:22:57.18:0,57,767	0/0:18,0:17:48.14:0,48,641	0/0:34,0:34:90.27:0,90,1203	0/0:26,0:25:69.23:0,69,944	0/0:25,0:25:72.12:0,72,950	0/0:18,0:18:54.18:0,54,742	0/0:4,0:4:12.03:0,12,148
chr10	58794892	.	GT	G	2086.81	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=7.065;DP=652;FS=0.000;HRun=3;HaplotypeScore=63.2620;InbreedingCoeff=0.9942;MQ=88.18;MQ0=0;MQRankSum=0.160;QD=27.46;ReadPosRankSum=4.260;VQSLOD=2.6224;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:58:99:0,157,2213	0/0:6,0:6:18.06:0,18,258	0/0:26,0:26:75.21:0,75,1025	0/0:25,0:25:68.94:0,69,889	0/0:18,0:18:48.16:0,48,682	0/0:20,0:20:57.19:0,57,820	0/0:29,0:29:84.26:0,84,1170	0/0:30,0:30:87.28:0,87,1214	1/1:0,26:26:63.20:780,63,0	0/0:20,0:20:57.18:0,57,803	0/0:15,0:15:45.15:0,45,645	0/0:17,0:17:51.17:0,51,731	0/0:19,0:19:54.18:0,54,774	0/0:23,0:23:63.19:0,63,863	0/0:23,0:23:69.23:0,69,991	1/1:0,21:21:48.15:595,48,0	0/0:36,0:36:99:0,108,1528	1/1:1,28:29:69.22:855,69,0	0/0:23,0:23:66.20:0,66,900	0/0:12,0:12:36.12:0,36,517	0/0:44,0:44:99:0,132,1850	0/0:24,0:24:66.20:0,66,925	0/0:19,0:19:57.18:0,57,802	0/0:31,0:31:81.25:0,81,1134	0/0:14,0:14:42.14:0,42,604	0/0:16,0:16:48.12:0,48,666	0/0:22,0:21:57.19:0,57,815	0/0:6,0:6:18.06:0,18,259
chr10	58795043	.	C	CTGTG	1577.67	PASS	AB=0.991;AC=32;AF=0.696;AN=46;BaseQRankSum=-1.077;DP=590;FS=12.494;HRun=0;HaplotypeScore=125.2184;InbreedingCoeff=0.3532;MQ=57.08;MQ0=17;MQRankSum=-0.269;QD=4.02;ReadPosRankSum=-2.979;VQSLOD=1.0928;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:26:9.03:0,9,123	0/1:3,0:2:0:0,0,0	./.	./.	0/0:13,0:12:6:0,6,58	0/1:25,0:24:18.17:18,0,28	1/1:25,0:25:4.82:28,5,0	./.	./.	1/1:24,0:24:9.97:124,10,0	1/1:17,0:17:1.33:46,1,0	0/1:17,1:18:23.25:100,0,23	1/1:14,0:14:5.81:59,6,0	1/1:22,0:22:5.67:104,6,0	1/1:26,0:26:13.04:197,13,0	0/1:23,0:21:0.11:0,0,0	0/1:17,0:17:0:0,0,0	0/0:17,0:22:8.33:0,8,92	1/1:19,0:17:6.02:70,6,0	1/1:14,0:14:5.52:115,6,0	./.	1/1:18,0:18:5.13:86,5,0	0/0:10,0:9:2:0,2,20	1/1:32,16:48:3.50:72,4,0	0/1:16,0:15:0:0,0,0	1/1:21,0:19:24.08:338,24,0	1/1:25,0:22:24.50:334,25,0	1/1:14,0:13:2.92:17,3,0
chr10	58795096	.	T	TGA	1162.67	PASS	AB=0.944;AC=27;AF=0.500;AN=54;BaseQRankSum=1.727;DP=548;FS=13.051;HRun=0;HaplotypeScore=96.0208;InbreedingCoeff=0.4266;MQ=40.85;MQ0=54;MQRankSum=2.117;QD=4.20;ReadPosRankSum=0.816;VQSLOD=1.3764;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/0:2,0:1:0:0,0,0	0/0:24,0:6:17.69:0,18,129	0/0:29,0:8:14.45:0,14,119	1/1:14,0:12:1.51:5,2,0	0/0:23,0:22:17.83:0,18,238	0/0:28,0:24:40.94:0,41,322	0/0:22,0:21:14.50:0,14,61	1/1:12,0:8:2.60:10,3,0	0/1:21,0:19:31.41:225,0,31	1/1:19,0:17:14.96:125,15,0	0/0:15,0:14:4.31:0,4,121	0/0:12,0:12:2.10:0,2,107	1/1:19,0:17:14.99:127,15,0	1/1:26,0:25:20.01:155,20,0	0/1:14,0:13:0.02:0,0,0	0/0:11,0:8:0:0,0,0	1/1:15,0:9:4.06:10,4,0	1/1:15,0:8:8.93:72,9,0	1/1:16,0:16:11.45:90,11,0	0/1:24,0:20:50.25:80,0,50	0/0:28,0:28:4.49:0,4,290	0/1:9,0:8:13.08:13,0,51	0/0:49,0:42:12.64:0,13,262	1/1:21,0:19:2.30:182,2,0	1/1:18,0:14:14.95:125,15,0	0/1:17,10:25:28.81:29,0,32	1/1:6,0:4:9:85,9,0
chr10	58795105	.	GAGAGAGAA	G	58.26	PASS	AB=0.960;AC=11;AF=0.196;AN=56;BaseQRankSum=5.067;DP=568;FS=16.827;HRun=0;HaplotypeScore=137.3790;InbreedingCoeff=0.3783;MQ=41.57;MQ0=48;MQRankSum=-3.091;QD=0.48;ReadPosRankSum=-0.875;VQSLOD=1.4037;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:14:0.01:0,0,0	0/1:3,1:2:0.02:0,0,0	0/0:24,0:6:10.73:0,11,157	0/0:33,0:8:14.94:0,15,335	1/1:14,0:12:3.37:9,3,0	0/0:23,0:22:29.62:0,30,1500	0/0:28,0:24:51.05:0,51,1671	0/1:32,0:31:99:118,0,118	0/0:11,0:8:1.39:0,1,16	0/0:22,0:19:28.26:0,28,1336	0/0:18,0:17:29.62:0,30,620	0/0:19,0:18:22.36:0,22,899	0/0:14,0:14:32.51:0,33,872	0/0:16,0:13:22.68:0,23,567	0/0:25,0:24:29.69:0,30,861	1/1:17,0:14:5.07:27,5,0	0/0:10,4:10:2.84:0,3,14	1/1:13,0:8:4.06:10,4,0	0/0:15,0:9:4.19:0,4,357	0/0:21,0:21:11.43:0,11,461	0/0:20,0:18:39.98:0,40,1190	0/0:33,0:33:18.38:0,18,1730	0/1:10,0:10:5.41:5,0,362	0/0:45,0:40:65.18:0,65,2012	0/0:24,0:22:42.61:0,43,1155	0/0:12,0:11:11.25:0,11,322	0/0:30,0:27:3.16:0,3,413	0/1:7,0:4:2.74:3,0,329
chr10	58795107	.	GAGAGAA	G	387.11	PASS	AB=1.000;AC=11;AF=0.204;AN=54;BaseQRankSum=5.353;DP=574;FS=38.854;HRun=0;HaplotypeScore=124.5553;InbreedingCoeff=0.5826;MQ=41.57;MQ0=49;MQRankSum=-5.551;QD=3.05;ReadPosRankSum=-2.613;VQSLOD=0.3721;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	0/1:4,0:2:0.05:0,0,0	0/0:24,0:6:14.72:0,15,213	0/1:34,0:8:0.24:0,0,345	1/1:9,5:12:5.58:32,6,0	0/0:22,0:21:41.83:0,42,1225	0/0:28,0:25:53.89:0,54,1447	1/1:34,0:33:13.54:431,14,0	0/0:11,0:8:3.76:0,4,17	0/0:23,0:20:19.62:0,20,1272	0/0:18,0:17:30.11:0,30,587	0/0:20,0:19:0.90:0,1,780	0/0:13,0:13:33.01:0,33,722	0/0:16,0:13:22.66:0,23,526	0/0:25,0:24:26.98:0,27,783	1/1:17,0:14:5:29,5,0	0/0:16,0:11:2.37:0,2,8	1/1:13,0:8:6.06:23,6,0	0/0:15,0:8:16.51:0,17,357	0/0:21,0:21:13.71:0,14,379	0/0:20,0:18:39.96:0,40,983	0/0:33,0:33:22.08:0,22,1514	0/1:11,0:11:3.51:4,0,307	0/0:45,0:40:51.81:0,52,1598	0/0:24,0:22:42.86:0,43,1050	0/0:12,0:11:17.87:0,18,352	0/0:29,0:26:7:0,7,327	0/0:8,0:4:10.85:0,11,274
chr10	58795109	.	GAGAA	G	787.40	PASS	AB=0.972;AC=13;AF=0.241;AN=54;BaseQRankSum=4.783;DP=577;FS=34.867;HRun=0;HaplotypeScore=111.4578;InbreedingCoeff=0.6405;MQ=41.61;MQ0=49;MQRankSum=-5.886;QD=6.67;ReadPosRankSum=-3.164;VQSLOD=0.3070;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/1:4,0:2:0.01:0,0,0	0/0:25,0:6:14.26:0,14,219	0/0:37,0:8:14.97:0,15,324	1/1:12,1:12:5.57:32,6,0	0/0:22,0:21:40.62:0,41,908	0/0:31,0:28:62.86:0,63,1164	1/1:26,8:33:83.50:814,83,0	0/1:10,1:8:8.25:12,0,8	0/0:23,0:20:21.48:0,21,977	0/0:17,0:16:30.10:0,30,441	0/0:20,0:19:18.76:0,19,593	0/0:13,0:13:33.05:0,33,557	0/0:15,0:12:22.66:0,23,416	0/0:24,0:23:12.26:0,12,571	1/1:16,0:13:5.42:29,5,0	1/1:16,0:11:1.55:4,2,0	1/1:13,0:8:7.63:39,8,0	0/0:15,0:8:4.11:0,4,267	0/0:21,0:21:17:0,17,332	0/0:21,0:19:42.96:0,43,739	0/0:34,0:34:23.79:0,24,1140	0/1:11,0:11:2.53:3,0,256	0/0:42,0:37:65.68:0,66,1253	0/0:25,0:23:45.70:0,46,819	0/0:12,0:11:16.60:0,17,323	0/0:29,0:26:9.02:0,9,247	0/0:8,0:4:12.02:0,12,220
chr10	58795121	.	GAC	G	464.58	PASS	AB=0.877;AC=10;AF=0.185;AN=54;BaseQRankSum=6.008;DP=579;FS=12.023;HRun=0;HaplotypeScore=97.0437;InbreedingCoeff=0.5632;MQ=42.82;MQ0=41;MQRankSum=-6.586;QD=4.55;ReadPosRankSum=-3.669;VQSLOD=0.6732;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,1:16:2.98:0,3,22	0/1:5,0:3:0:0,0,0	0/0:25,0:6:14.55:0,15,96	0/0:37,0:8:12.60:0,13,187	./.	0/0:22,0:21:22.05:0,22,705	0/0:29,0:26:60.19:0,60,1121	0/1:27,13:37:99:513,0,120	1/1:13,0:10:5.60:27,6,0	0/0:26,0:23:37.74:0,38,1059	0/0:17,0:15:8.09:0,8,393	0/0:18,0:17:15.75:0,16,631	0/0:14,0:14:36.07:0,36,577	0/0:14,0:12:26.45:0,26,389	0/0:22,0:21:34.52:0,35,563	1/1:20,0:16:5.30:27,5,0	1/1:13,1:10:2.37:8,2,0	1/1:10,0:5:2.80:13,3,0	0/0:12,0:8:24.07:0,24,405	0/0:20,0:19:30.56:0,31,524	0/0:19,0:18:39.13:0,39,750	0/0:30,0:30:54.13:0,54,961	0/0:15,0:15:4.16:0,4,374	0/0:48,0:43:87.21:0,87,1439	0/0:23,0:22:42.13:0,42,772	0/0:10,0:9:8.10:0,8,361	0/0:28,0:25:35.91:0,36,551	0/0:10,0:7:18.06:0,18,323
chr10	58795141	.	GAGAC	G	327.11	PASS	AB=1.000;AC=12;AF=0.222;AN=54;BaseQRankSum=6.658;DP=560;FS=3.744;HRun=0;HaplotypeScore=117.9731;InbreedingCoeff=0.5691;MQ=45.56;MQ0=35;MQRankSum=-5.840;QD=2.20;ReadPosRankSum=-6.111;VQSLOD=0.3680;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:26,1:19:2.42:0,2,10	1/1:8,0:6:2.08:66,2,0	./.	0/0:14,0:2:2.98:0,3,22	1/1:18,2:17:2.99:23,3,0	0/0:23,0:22:25.46:0,25,936	0/0:25,0:23:63.07:0,63,1082	0/1:53,0:48:52.15:52,0,622	1/1:17,0:14:8.77:65,9,0	0/0:23,0:21:62.81:0,63,1230	0/0:14,0:12:29.87:0,30,551	0/0:21,0:20:47.40:0,47,996	0/0:13,0:13:35.44:0,35,717	0/0:16,0:14:30.08:0,30,647	0/0:24,0:22:47.88:0,48,991	0/1:22,0:19:27.55:65,0,28	1/1:16,4:16:14.33:188,14,0	1/1:9,0:4:2.94:18,3,0	0/0:11,0:8:13.77:0,14,395	0/0:18,0:17:32.96:0,33,728	0/0:20,0:18:45.11:0,45,986	0/0:26,0:26:51.11:0,51,1033	0/0:16,0:16:26.55:0,27,559	0/0:38,0:34:87.17:0,87,2074	0/0:22,0:21:48.11:0,48,1082	0/0:20,0:19:38.16:0,38,1109	0/0:22,0:21:36.07:0,36,806	0/0:15,0:11:26.12:0,26,580
chr10	58795143	.	GAC	G	179.58	PASS	AB=0.927;AC=13;AF=0.241;AN=54;BaseQRankSum=7.104;DP=554;FS=3.453;HRun=0;HaplotypeScore=104.5473;InbreedingCoeff=0.5248;MQ=45.96;MQ0=31;MQRankSum=-5.753;QD=1.04;ReadPosRankSum=-5.358;VQSLOD=0.5099;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:19:2.13:0,2,7	1/1:8,0:6:2.02:44,2,0	./.	0/0:11,0:2:2.98:0,3,22	1/1:21,0:17:2.99:23,3,0	0/1:21,0:20:2.35:2,0,658	0/0:26,0:24:66.06:0,66,903	0/1:53,2:50:77.32:77,0,640	1/1:16,1:14:9.01:45,9,0	0/0:23,0:21:56.14:0,56,917	0/0:14,0:13:29.69:0,30,406	0/0:21,0:20:50.40:0,50,755	0/0:13,0:13:35.44:0,35,550	0/0:16,0:14:30.08:0,30,492	0/0:25,0:23:50.99:0,51,787	0/1:17,5:19:16.36:37,0,16	1/1:18,1:16:14.52:83,15,0	1/1:9,0:4:2.94:18,3,0	0/0:10,0:8:13.64:0,14,291	0/0:17,0:16:32.96:0,33,532	0/0:21,0:19:48.09:0,48,775	0/0:24,0:24:51.10:0,51,810	0/0:16,0:16:26.47:0,26,422	0/0:38,0:34:87.15:0,87,1491	0/0:22,1:22:48.10:0,48,783	0/0:19,0:18:37.94:0,38,818	0/0:22,0:21:39.09:0,39,628	0/0:14,0:11:26.22:0,26,432
chr10	58795167	.	CAG	C	39.84	PASS	AB=0.905;AC=3;AF=0.054;AN=56;BaseQRankSum=5.269;DP=572;FS=2.743;HRun=0;HaplotypeScore=99.2861;InbreedingCoeff=0.0929;MQ=47.59;MQ0=29;MQRankSum=-3.787;QD=0.64;ReadPosRankSum=-0.829;VQSLOD=1.2707;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:23:17.80:0,18,264	0/0:9,0:8:10.15:0,10,190	0/0:12,0:1:0.47:0,0,1	0/0:18,0:3:5.38:0,5,44	0/0:24,0:20:12.04:0,12,183	0/0:21,0:20:41.97:0,42,620	0/0:19,0:19:36.12:0,36,569	0/0:36,0:31:69.16:0,69,882	0/1:17,0:14:10.53:79,0,11	0/0:21,0:19:41.11:0,41,573	0/0:13,0:12:24.08:0,24,361	0/0:20,0:20:54.17:0,54,840	0/0:12,0:11:29.87:0,30,403	0/0:15,0:14:27.09:0,27,437	0/0:25,0:24:57.15:0,57,870	0/1:12,8:18:26.10:48,0,26	0/1:25,0:22:1.94:2,0,235	0/0:8,0:5:3.01:0,3,34	0/0:19,0:15:35.99:0,36,500	0/0:20,0:19:2.84:0,3,539	0/0:23,1:22:48.14:0,48,714	0/0:25,1:26:35.01:0,35,554	0/0:16,0:16:34.34:0,34,511	0/0:38,0:36:93.22:0,93,1482	0/0:20,1:20:33.11:0,33,531	0/0:25,0:24:64.97:0,65,958	0/0:25,0:25:48.15:0,48,749	0/0:15,0:12:36.11:0,36,564
chr10	58795179	.	GAC	G	168.53	PASS	AB=0.991;AC=7;AF=0.125;AN=56;BaseQRankSum=6.918;DP=621;FS=0.823;HRun=0;HaplotypeScore=101.9469;InbreedingCoeff=0.2629;MQ=51.62;MQ0=34;MQRankSum=-3.055;QD=1.03;ReadPosRankSum=-3.064;VQSLOD=1.4358;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:26:26.78:0,27,284	0/1:8,0:7:8.12:8,0,139	0/1:40,2:10:1.53:2,0,5	0/1:52,0:14:11.99:12,0,84	0/0:26,0:22:21.01:0,21,211	0/0:21,0:20:50.90:0,51,683	0/0:18,0:18:44.95:0,45,647	0/0:29,0:26:76.71:0,77,826	1/1:10,10:17:3.88:198,4,0	0/0:20,0:18:37.68:0,38,722	0/0:15,0:14:35.52:0,36,429	0/0:20,0:20:51.15:0,51,936	0/0:12,0:11:28.16:0,28,360	0/0:16,0:15:33.04:0,33,499	0/0:22,0:21:55.71:0,56,939	0/1:19,0:17:2.68:53,0,3	0/1:23,0:21:8.57:9,0,195	0/0:12,0:11:2.94:0,3,18	0/0:17,0:14:37.29:0,37,581	0/0:19,0:18:13.98:0,14,593	0/0:24,0:22:52.69:0,53,833	0/0:27,0:27:41.97:0,42,840	0/0:15,0:15:18.10:0,18,560	0/0:37,0:35:96.14:0,96,1624	0/0:17,0:16:39.10:0,39,668	0/0:26,0:25:74.11:0,74,1118	0/0:20,0:20:50.74:0,51,892	0/0:15,0:13:39.11:0,39,628
chr10	58795181	.	CAG	C	111.67	PASS	AB=0.893;AC=5;AF=0.089;AN=56;BaseQRankSum=6.355;DP=642;FS=3.491;HRun=0;HaplotypeScore=104.3158;InbreedingCoeff=0.3954;MQ=53.39;MQ0=36;MQRankSum=-3.279;QD=1.03;ReadPosRankSum=-1.582;VQSLOD=1.9565;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:27:26.75:0,27,114	0/0:8,0:7:6.17:0,6,41	0/1:46,0:12:1.24:1,0,64	0/0:58,0:17:6.27:0,6,129	0/0:28,0:24:21.37:0,21,90	0/0:21,0:20:39.12:0,39,615	0/0:20,0:20:39.10:0,39,604	0/0:30,0:27:53.46:0,53,437	1/1:20,0:17:11.93:94,12,0	0/0:21,0:19:48.15:0,48,753	0/0:16,0:15:29.77:0,30,431	0/0:19,0:19:48.16:0,48,811	0/0:11,0:10:23.18:0,23,295	0/0:16,0:15:27.09:0,27,442	0/0:24,0:23:54.11:0,54,829	0/1:8,8:15:5.84:116,0,6	0/1:24,0:22:2.49:2,0,58	0/0:13,0:12:3:0,3,25	0/0:20,0:16:43.33:0,43,646	0/0:18,0:17:33.11:0,33,524	0/0:24,0:22:48.14:0,48,739	0/0:27,0:27:50.77:0,51,891	0/0:15,0:15:30.10:0,30,506	0/0:37,0:35:90.16:0,90,1406	0/0:16,1:16:36.12:0,36,601	0/0:26,0:25:72.17:0,72,1066	0/0:20,0:20:51.11:0,51,824	0/0:15,0:13:38.62:0,39,538
chr10	58795191	.	CAG	C	1834.60	PASS	AB=0.931;AC=18;AF=0.321;AN=56;BaseQRankSum=7.630;DP=653;FS=22.361;HRun=0;HaplotypeScore=100.4866;InbreedingCoeff=0.6635;MQ=58.89;MQ0=38;MQRankSum=-3.885;QD=8.49;ReadPosRankSum=-0.541;VQSLOD=1.6747;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:9,24:30:30.09:369,30,0	1/1:3,6:8:11.93:148,12,0	0/0:61,0:18:18.78:0,19,144	0/0:78,1:24:11.80:0,12,283	1/1:10,17:24:24.08:295,24,0	0/0:19,0:18:33.11:0,33,532	0/0:17,0:17:36.11:0,36,562	1/1:8,21:28:47.85:506,48,0	1/1:4,15:17:21.05:233,21,0	0/0:17,0:16:42.14:0,42,673	0/1:11,1:12:9.82:10,0,361	0/0:19,0:19:42.06:0,42,578	0/1:10,1:10:21.87:22,0,171	0/0:12,0:11:21.07:0,21,342	0/0:24,1:24:14.24:0,14,716	1/1:9,9:16:16.47:176,16,0	1/1:10,13:21:20.85:258,21,0	0/0:16,0:15:1.82:0,2,5	0/1:19,1:16:3.83:4,0,446	0/0:16,0:15:27.09:0,27,435	0/0:24,0:22:36.12:0,36,574	0/0:25,0:25:11.26:0,11,697	0/0:12,0:12:30.09:0,30,462	0/0:29,0:29:55.66:0,56,885	0/0:17,0:16:30.08:0,30,440	0/0:26,0:25:23.26:0,23,842	0/0:22,0:22:51.14:0,51,794	0/1:13,1:13:9.84:10,0,339
chr10	58795193	.	G	GAGAC	278.22	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=6.054;DP=657;FS=1.684;HRun=0;HaplotypeScore=127.3277;InbreedingCoeff=0.6832;MQ=60.62;MQ0=37;MQRankSum=-3.790;QD=3.35;ReadPosRankSum=-2.597;VQSLOD=1.8106;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:31:31.83:0,32,253	0/0:9,0:8:14.89:0,15,131	0/0:63,0:19:23.21:0,23,235	0/0:81,0:27:10.84:0,11,368	0/0:26,0:24:23.83:0,24,214	0/0:19,0:18:36.11:0,36,638	0/0:18,0:18:42.10:0,42,698	0/1:29,0:27:88.65:89,0,296	1/1:19,0:17:4.81:118,5,0	0/0:16,0:16:45.10:0,45,775	0/0:13,0:13:33.04:0,33,516	0/0:20,0:20:51.10:0,51,793	0/0:11,0:10:29.91:0,30,346	0/0:12,0:11:27.06:0,27,446	0/0:23,0:22:54.15:0,54,919	1/1:18,0:16:9.67:119,10,0	0/0:24,0:22:22.18:0,22,214	1/1:2,14:16:3.01:76,3,0	0/0:19,0:16:42.10:0,42,640	0/0:16,0:15:30.09:0,30,515	0/0:24,0:22:45.11:0,45,722	0/0:25,0:25:57.09:0,57,947	0/0:12,0:12:36.08:0,36,576	0/0:28,0:28:57.53:0,58,1130	0/0:17,0:16:42.05:0,42,587	0/0:26,0:25:61.89:0,62,1110	0/0:22,0:22:60.03:0,60,979	0/0:14,0:13:38.63:0,39,528
chr10	58798084	.	T	TA	6662.58	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=-11.710;DP=502;FS=1.133;HRun=7;HaplotypeScore=50.7760;InbreedingCoeff=0.9161;MQ=68.89;MQ0=0;MQRankSum=0.804;QD=30.28;ReadPosRankSum=0.826;VQSLOD=5.1394;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:36.05:0,36,348	0/0:4,0:4:12.02:0,12,116	0/0:11,0:10:17.37:0,17,147	0/1:10,0:10:24.75:25,0,113	0/0:30,0:30:90.13:0,90,864	0/0:16,0:16:48.08:0,48,463	0/0:5,0:5:15.02:0,15,145	0/0:30,0:30:66.09:0,66,637	0/0:13,0:13:29.97:0,30,274	1/1:2,25:27:75.16:856,75,0	1/1:2,27:29:75.19:885,75,0	0/0:18,0:18:45.06:0,45,435	0/0:23,0:23:69.07:0,69,650	1/1:0,16:16:42.13:507,42,0	1/1:0,13:13:36.11:435,36,0	0/0:25,0:25:66.04:0,66,622	0/0:22,0:22:53.35:0,53,507	0/0:28,0:28:66.01:0,66,618	1/1:0,16:16:48.11:564,48,0	1/1:1,21:22:60.15:709,60,0	1/1:0,11:11:27.08:326,27,0	0/0:16,0:16:42.07:0,42,406	0/0:20,0:20:57.08:0,57,547	0/0:6,0:6:15.02:0,15,145	1/1:0,14:14:36.11:435,36,0	1/1:2,16:18:48.15:578,48,0	1/1:3,27:30:78.24:942,78,0	1/1:1,13:14:33.10:399,33,0
chr10	58800230	.	TACAC	T	1524.41	PASS	AB=0.820;AC=23;AF=0.442;AN=52;BaseQRankSum=2.899;DP=643;FS=4.572;HRun=0;HaplotypeScore=114.0103;InbreedingCoeff=0.4708;MQ=69.25;MQ0=8;MQRankSum=0.348;QD=4.95;ReadPosRankSum=1.257;VQSLOD=2.2483;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:19,10:28:21.06:309,21,0	0/0:11,0:11:6.02:0,6,110	./.	./.	1/1:12,6:18:6.02:94,6,0	0/1:16,1:18:19.97:20,0,455	0/0:29,0:32:21.27:0,21,380	0/0:22,0:22:18.06:0,18,319	0/0:16,0:34:23.99:0,24,410	1/1:18,4:22:2.89:47,3,0	1/1:11,2:13:6.02:94,6,0	0/0:27,0:30:44.86:0,45,817	0/0:27,0:29:32.56:0,33,610	1/1:14,5:21:21.01:281,21,0	1/1:16,10:25:18.06:281,18,0	0/0:12,0:22:24.07:0,24,379	0/0:24,0:25:38.87:0,39,749	0/0:8,0:25:42.13:0,42,797	0/0:13,0:13:1.19:0,1,10	0/1:7,1:12:25.48:36,0,25	1/1:34,1:36:8.05:92,8,0	0/0:18,0:17:21.07:0,21,419	0/0:15,0:15:14.73:0,15,199	0/1:29,2:33:40.31:40,0,866	1/1:12,3:15:5.81:93,6,0	1/1:19,4:22:7.08:130,7,0	0/1:20,0:23:24.05:24,0,83	0/1:11,5:18:6.82:170,0,7
chr10	58800592	.	AACACACACAC	A	7217.13	PASS	AB=0.813;AC=21;AF=0.375;AN=56;BaseQRankSum=8.275;DP=606;FS=2.243;HRun=0;HaplotypeScore=180.7458;InbreedingCoeff=0.8179;MQ=59.97;MQ0=9;MQRankSum=-7.002;QD=34.20;ReadPosRankSum=1.378;VQSLOD=4.4784;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:18.06:0,18,727	0/0:4,0:7:3.01:0,3,131	0/0:35,0:22:15.05:0,15,372	0/0:17,0:11:6.02:0,6,188	0/0:16,0:22:5.52:0,6,167	0/0:20,0:23:33.11:0,33,1358	0/0:25,0:30:57.20:0,57,2278	0/0:25,0:24:27.96:0,28,909	0/0:14,0:19:6.02:0,6,261	1/1:8,20:27:54.05:1302,54,0	1/1:4,8:13:11.98:193,12,0	0/0:19,0:22:39.13:0,39,1724	0/0:21,0:22:60.21:0,60,2634	1/1:8,15:25:35.98:1044,36,0	1/1:8,15:24:39.13:1156,39,0	0/0:19,0:24:8.71:0,9,246	0/0:14,0:14:13.84:0,14,334	0/0:18,0:18:24.08:0,24,894	1/1:9,5:14:11.98:296,12,0	1/1:12,11:23:30.10:829,30,0	1/1:7,0:8:9.01:152,9,0	0/0:25,0:25:48.16:0,48,1989	0/0:15,0:15:27.09:0,27,1050	0/0:40,0:42:81.25:0,81,3360	1/1:9,10:19:15.05:417,15,0	1/1:8,12:20:30.55:720,31,0	1/1:10,13:24:36.12:1026,36,0	0/1:10,3:10:80.62:83,0,81
chr10	58800979	.	TGAGAGGGA	T	263.43	PASS	AB=0.994;AC=9;AF=0.161;AN=56;BaseQRankSum=1.958;DP=633;FS=0.755;HRun=0;HaplotypeScore=183.7276;InbreedingCoeff=0.2363;MQ=60.60;MQ0=12;MQRankSum=-3.107;QD=1.65;ReadPosRankSum=-3.494;VQSLOD=2.0428;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:70.48:0,70,696	0/0:3,0:3:5.96:0,6,46	0/1:22,0:7:1.63:2,0,77	0/0:32,0:18:4.30:0,4,104	0/1:20,0:19:19.94:20,0,134	0/0:23,0:23:36.33:0,36,598	0/0:27,0:27:45.06:0,45,645	0/0:21,0:20:56.71:0,57,475	0/1:29,1:30:99:124,0,234	0/1:14,0:14:3.30:3,0,377	0/0:12,0:12:6:0,6,118	0/0:19,0:19:35.98:0,36,398	0/0:27,0:26:54.31:0,54,832	0/0:21,0:21:21.53:0,22,605	0/1:31,0:31:23.50:23,0,509	1/1:3,22:26:4.05:50,4,0	0/0:26,0:26:47.18:0,47,402	1/1:16,0:15:24.39:175,24,0	0/0:29,0:28:24.54:0,25,798	0/0:15,0:15:6.01:0,6,166	0/0:48,0:48:71.73:0,72,1657	0/0:19,0:19:48.07:0,48,988	0/0:12,0:10:21.02:0,21,267	0/0:36,0:35:63.08:0,63,939	0/0:11,0:12:2.99:0,3,281	0/0:23,0:23:41.85:0,42,865	0/0:24,0:23:27.42:0,27,761	0/0:3,0:3:6.02:0,6,107
chr10	58800981	.	AGAGG	A	711.10	PASS	AB=0.990;AC=16;AF=0.286;AN=56;BaseQRankSum=3.635;DP=629;FS=35.876;HRun=0;HaplotypeScore=140.4108;InbreedingCoeff=-0.1533;MQ=59.44;MQ0=12;MQRankSum=-3.342;QD=1.90;ReadPosRankSum=-4.286;VQSLOD=-0.7173;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:41,2:43:99:166,0,288	0/0:3,0:3:5.96:0,6,46	0/1:23,0:7:1.63:2,0,77	0/0:29,0:15:2.36:0,2,100	0/0:13,7:19:14.24:0,14,107	0/0:23,0:23:24.45:0,24,301	0/0:27,0:27:24.63:0,25,400	0/0:21,0:20:58.95:0,59,458	0/1:30,0:30:40.07:40,0,218	0/1:12,0:12:33.41:33,0,91	0/0:12,0:12:3:0,3,53	0/1:19,0:19:7.97:8,0,210	0/1:26,0:25:9.96:10,0,398	0/0:21,0:21:18.50:0,18,271	0/1:29,0:29:25.82:26,0,208	1/1:25,0:25:2.63:19,3,0	0/1:28,0:28:74.33:74,0,222	1/1:15,1:15:32.87:261,33,0	0/1:28,1:28:40.19:40,0,229	0/0:15,0:15:5.94:0,6,78	0/1:48,0:48:76.36:76,0,648	0/0:19,0:19:6.85:0,7,614	0/0:12,0:10:20.99:0,21,181	0/0:36,0:35:60.79:0,61,505	0/0:13,0:13:2.49:0,2,132	0/1:23,0:23:17.93:18,0,282	0/1:23,1:23:92.15:92,0,191	0/0:3,0:3:5.96:0,6,65
chr10	58800985	.	GGA	G	807.50	PASS	AB=0.826;AC=19;AF=0.365;AN=52;BaseQRankSum=-1.701;DP=625;FS=33.416;HRun=0;HaplotypeScore=120.6253;InbreedingCoeff=0.0821;MQ=57.80;MQ0=16;MQRankSum=1.792;QD=2.29;ReadPosRankSum=-0.283;VQSLOD=0.5566;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:45:10.92:70,0,11	0/0:4,0:4:2.92:0,3,17	./.	./.	0/1:18,0:18:0:0,0,0	0/1:11,10:22:23.73:56,0,24	0/1:10,13:24:10.08:98,0,10	0/0:23,0:22:5.64:0,6,33	0/1:14,0:30:10.61:26,0,11	0/1:11,0:12:12.40:12,0,111	0/0:12,0:12:3.01:0,3,44	1/1:9,9:19:11.85:104,12,0	0/1:21,3:25:6.31:229,0,6	0/0:22,0:22:16.02:0,16,167	0/1:28,0:29:14:14,0,186	1/1:24,0:24:2.69:20,3,0	0/1:14,0:27:0.45:50,0,0	0/1:13,0:12:0:0,0,0	0/0:27,0:26:3.54:0,4,151	0/0:14,0:14:3:0,3,25	0/0:45,0:47:8.96:0,9,478	0/0:17,0:18:5.56:0,6,188	1/1:10,2:10:3.01:33,3,0	1/1:17,18:35:21.05:229,21,0	0/1:11,0:12:11.85:12,0,73	0/0:20,0:22:7.52:0,8,217	0/0:24,0:25:24.98:0,25,240	0/0:6,0:6:8:0,8,68
chr10	58802249	.	GGAT	G	6971.10	PASS	AB=0.938;AC=27;AF=0.482;AN=56;BaseQRankSum=14.293;DP=475;FS=12.958;HRun=0;HaplotypeScore=95.8325;InbreedingCoeff=0.9017;MQ=84.31;MQ0=0;MQRankSum=-6.632;QD=36.50;ReadPosRankSum=5.912;VQSLOD=5.0954;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:90.31:0,90,2018	0/0:3,0:3:9.03:0,9,210	0/0:17,0:17:48.04:0,48,924	0/0:23,0:23:59.69:0,60,1197	0/0:14,0:14:42.14:0,42,936	0/0:19,0:19:57.20:0,57,1318	0/0:32,0:32:96.31:0,96,2112	0/0:27,0:25:75.26:0,75,1712	0/0:19,0:19:57.17:0,57,1221	1/1:2,13:15:39.13:656,39,0	1/1:0,5:5:9.03:154,9,0	0/0:22,0:22:63.20:0,63,1411	0/1:14,1:15:8.98:9,0,845	1/1:1,19:20:57.20:971,57,0	1/1:2,19:21:51.17:870,51,0	1/1:0,11:11:30.10:511,30,0	0/0:34,0:34:90.30:0,90,1984	1/1:0,11:11:33.07:531,33,0	1/1:4,10:13:27.04:427,27,0	1/1:0,7:7:12.04:205,12,0	1/1:5,18:23:48.15:777,48,0	0/0:10,0:10:30.10:0,30,675	0/0:5,0:5:15.05:0,15,339	0/0:21,0:21:60.20:0,60,1399	1/1:1,11:12:12.04:205,12,0	1/1:0,17:17:51.13:837,51,0	1/1:1,15:16:39.13:665,39,0	1/1:0,4:4:9.03:154,9,0
chr10	58802347	.	G	GGTAGAGCGCTTGCCTAGCA	7437.47	PASS	AB=0.938;AC=23;AF=0.548;AN=42;BaseQRankSum=-4.151;DP=216;FS=18.486;HRun=0;HaplotypeScore=96.3865;InbreedingCoeff=0.7651;MQ=53.68;MQ0=15;MQRankSum=-5.091;QD=92.97;ReadPosRankSum=-1.007;VQSLOD=2.7683;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,3:11:24.03:1289,24,0	./.	0/0:26,0:5:12.04:0,12,475	0/0:28,0:12:30.38:0,30,696	./.	0/0:4,0:4:12.04:0,12,639	0/0:13,0:12:36.12:0,36,1892	1/1:8,0:6:11.99:208,12,0	0/0:14,0:14:42.14:0,42,2115	1/1:5,1:6:9.02:370,9,0	./.	0/0:12,0:12:33.11:0,33,1581	0/1:14,1:15:99:234,0,1990	1/1:1,5:6:15.05:1398,15,0	./.	1/1:0,0:2:2.66:262,3,0	1/1:4,2:6:12.03:626,12,0	1/1:2,0:3:6.02:135,6,0	1/1:3,3:5:12.04:999,12,0	./.	1/1:3,1:3:8.99:373,9,0	0/0:8,0:8:21.06:0,21,1031	0/0:7,0:7:21.06:0,21,1025	0/0:15,0:14:42.14:0,42,2206	./.	1/1:0,5:9:21.03:1264,21,0	1/1:1,1:4:3.01:281,3,0	./.
chr10	58803706	.	A	AGGT	10344.61	PASS	AB=0.571;AC=37;AF=0.661;AN=56;BaseQRankSum=16.595;DP=515;FS=0.728;HRun=0;HaplotypeScore=148.8397;InbreedingCoeff=0.9018;MQ=78.06;MQ0=0;MQRankSum=-15.608;QD=36.68;ReadPosRankSum=-1.932;VQSLOD=4.6670;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,21:31:52.73:927,53,0	1/1:3,4:7:21.07:335,21,0	0/0:19,0:19:54.18:0,54,880	0/0:23,0:23:46.41:0,46,843	1/1:3,8:12:8.64:120,9,0	0/0:22,0:22:63.20:0,63,1084	0/0:30,0:30:87.28:0,87,1505	1/1:17,8:25:61.45:1054,61,0	1/1:5,11:16:45.14:776,45,0	1/1:9,5:14:38.12:560,38,0	1/1:3,6:9:10.58:141,11,0	0/0:28,0:28:81.28:0,81,1428	0/0:27,0:27:78.25:0,78,1344	0/1:3,9:12:19.82:474,0,20	1/1:5,13:18:48.08:808,48,0	1/1:5,5:10:27.09:492,27,0	1/1:5,9:14:30.09:524,30,0	1/1:6,5:11:15.05:294,15,0	1/1:12,1:13:32.83:478,33,0	1/1:2,10:12:30.10:533,30,0	1/1:12,15:27:24.04:374,24,0	0/0:25,0:25:72.25:0,72,1260	0/0:18,0:18:51.17:0,51,900	0/0:41,0:41:99:0,120,2083	1/1:4,11:15:39.13:684,39,0	1/1:6,8:14:39.60:668,40,0	1/1:3,9:12:33.11:619,33,0	1/1:2,7:9:27.05:484,27,0
chr10	58803707	.	GC	G	1308.38	PASS	AB=0.970;AC=35;AF=0.625;AN=56;BaseQRankSum=15.471;DP=443;FS=3.417;HRun=1;HaplotypeScore=126.4310;InbreedingCoeff=0.7233;MQ=82.37;MQ0=0;MQRankSum=-14.682;QD=6.20;ReadPosRankSum=2.722;VQSLOD=0.9245;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:23:34.65:152,35,0	1/1:4,0:4:9.58:34,10,0	0/0:19,0:19:57.19:0,57,875	0/0:22,0:22:41.26:0,41,771	0/1:9,1:10:15.09:34,0,15	0/0:22,0:22:63.20:0,63,984	0/0:29,0:29:87.28:0,87,1366	1/1:13,1:14:23.93:102,24,0	1/1:12,0:12:24.46:86,24,0	1/1:5,0:9:9.29:43,9,0	0/1:8,0:8:6.52:7,0,15	0/0:28,0:28:81.28:0,81,1293	0/0:26,0:26:78.27:0,78,1244	0/1:10,0:10:24.74:65,0,25	1/1:17,0:17:33.07:119,33,0	1/1:7,1:8:18.06:91,18,0	1/1:10,2:12:20.73:107,21,0	1/1:8,0:8:12.86:50,13,0	1/1:3,1:4:5.61:48,6,0	1/1:10,0:10:12.05:58,12,0	1/1:17,1:18:2.88:45,3,0	0/0:25,0:25:75.26:0,75,1194	0/0:20,0:20:57.17:0,57,865	0/0:41,0:41:99:0,123,1915	1/1:11,1:12:26.37:170,26,0	1/1:11,1:12:19.60:116,20,0	1/1:12,0:11:26.85:130,27,0	1/1:8,0:8:17.16:64,17,0
chr10	58803708	.	C	CT	4269.58	PASS	AB=0.675;AC=36;AF=0.643;AN=56;BaseQRankSum=15.665;DP=440;FS=12.288;HRun=0;HaplotypeScore=117.0552;InbreedingCoeff=0.8042;MQ=82.66;MQ0=0;MQRankSum=-13.475;QD=20.53;ReadPosRankSum=1.761;VQSLOD=5.7457;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,20:24:45:428,45,0	1/1:0,4:4:12.02:121,12,0	0/0:19,0:19:57.11:0,57,714	0/0:23,0:23:10.06:0,10,633	1/1:1,9:10:1.55:43,2,0	0/0:21,0:21:60.20:0,60,839	0/0:29,0:29:84.28:0,84,1175	1/1:6,8:14:33.02:323,33,0	1/1:1,11:12:30.05:298,30,0	1/1:4,5:9:20.98:199,21,0	1/1:2,6:8:7.96:118,8,0	0/0:28,0:28:81.27:0,81,1132	0/0:26,0:26:78.25:0,78,1071	0/1:2,9:11:14.94:202,0,15	1/1:0,16:16:42.08:419,42,0	1/1:2,5:7:20.99:199,21,0	1/1:2,9:11:23.53:213,24,0	1/1:2,5:7:18.02:185,18,0	0/1:3,1:4:1.73:26,0,2	1/1:0,10:10:21.71:232,22,0	1/1:2,15:17:5.44:132,5,0	0/0:25,0:25:75.24:0,75,1028	0/0:20,0:20:57.16:0,57,762	0/0:41,0:41:99:0,120,1656	1/1:1,11:12:29.57:260,30,0	1/1:1,11:12:35.76:328,36,0	1/1:3,9:11:32.78:294,33,0	1/1:0,7:8:24.05:252,24,0
chr10	58803839	.	A	ATCTCTC	837.59	PASS	AB=0.974;AC=17;AF=0.354;AN=48;BaseQRankSum=-0.220;DP=573;FS=16.257;HRun=0;HaplotypeScore=143.1903;InbreedingCoeff=0.0415;MQ=71.81;MQ0=11;MQRankSum=-1.074;QD=3.31;ReadPosRankSum=-3.547;VQSLOD=0.6364;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:19:3.15:0,3,13	0/0:12,0:10:8.73:0,9,141	./.	./.	0/0:11,0:11:2.63:0,3,52	1/1:9,0:14:0.47:2,0,0	./.	./.	0/1:17,1:17:18.73:20,0,19	0/1:29,0:28:80.51:243,0,81	0/0:13,0:13:2.75:0,3,58	0/0:27,0:27:6.44:0,6,91	0/0:24,0:26:32.78:0,33,526	1/1:16,0:15:8.93:72,9,0	0/1:18,0:18:51.73:63,0,52	0/0:14,0:14:4.57:0,5,53	0/0:12,0:12:11.34:0,11,205	0/0:12,0:12:9.03:0,9,153	0/1:16,0:15:13.63:14,0,68	0/1:16,0:16:14.22:24,0,14	0/1:17,0:17:11.97:53,0,12	0/1:11,0:13:0:0,0,0	0/0:12,0:12:0.47:0,0,1	0/0:29,0:30:36.69:0,37,574	0/1:25,0:25:17.07:17,0,39	0/1:25,7:32:10.83:242,0,11	1/1:21,0:21:5.34:135,5,0	1/1:18,0:18:11.16:93,11,0
chr10	58803874	.	T	TCACACACACACACACA	777.87	PASS	AB=0.967;AC=8;AF=0.148;AN=54;BaseQRankSum=3.824;DP=520;FS=12.772;HRun=0;HaplotypeScore=213.5923;InbreedingCoeff=-0.1927;MQ=45.85;MQ0=26;MQRankSum=-0.170;QD=5.80;ReadPosRankSum=-1.021;VQSLOD=1.6740;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:15:7.91:0,8,41	0/1:9,5:12:99:176,0,487	./.	0/0:22,0:5:9.03:0,9,109	0/0:7,0:7:5.38:0,5,83	0/0:24,0:23:43.71:0,44,1715	0/1:22,0:22:13.19:19,0,13	0/0:15,0:15:37.88:0,38,484	0/1:23,0:22:17.76:18,0,469	0/0:24,0:22:39.26:0,39,1454	0/0:17,0:16:5.18:0,5,218	0/0:33,0:32:19.42:0,19,593	0/1:27,0:27:17.33:17,0,1572	0/0:16,0:15:17.95:0,18,477	0/0:16,0:16:17.18:0,17,476	0/1:11,0:10:23.01:23,0,159	0/1:13,0:12:99:333,0,297	0/1:7,0:7:56.94:316,0,57	0/0:8,0:7:16.30:0,16,669	0/0:17,0:17:9.03:0,9,294	0/1:17,0:14:0.60:1,0,213	0/0:24,0:24:2.64:0,3,133	0/0:19,0:19:2.09:0,2,129	0/0:37,0:37:73.70:0,74,2208	0/0:20,0:20:27.49:0,27,646	0/0:26,0:26:39.63:0,40,1371	0/0:23,0:23:44.78:0,45,1007	0/0:9,0:6:17.22:0,17,402
chr10	58803876	.	TCTCTCTCA	T	1609.12	PASS	AB=0.981;AC=11;AF=0.204;AN=54;BaseQRankSum=-3.732;DP=528;FS=5.251;HRun=0;HaplotypeScore=156.4110;InbreedingCoeff=0.4040;MQ=46.33;MQ0=25;MQRankSum=3.273;QD=10.12;ReadPosRankSum=1.118;VQSLOD=2.1490;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:16:3.17:0,3,66	0/0:14,0:12:17.78:0,18,376	./.	0/0:22,0:6:14.77:0,15,136	0/1:6,0:6:43.40:48,0,43	1/1:25,0:24:35.11:291,35,0	1/1:23,0:23:0.34:1,0,0	0/0:15,0:14:21.20:0,21,232	0/0:24,0:23:25.07:0,25,381	0/0:25,0:23:57.16:0,57,1281	0/0:18,0:17:12.01:0,12,221	0/1:31,2:32:7.99:172,0,8	1/1:26,2:28:40.17:516,40,0	0/0:17,0:16:24.05:0,24,390	0/0:16,0:16:18.01:0,18,339	0/0:12,0:11:12.43:0,12,209	0/0:13,0:12:0.33:0,0,163	0/1:7,0:7:54.63:148,0,55	0/0:8,0:7:18.06:0,18,508	0/0:16,0:16:18.05:0,18,340	0/0:16,0:13:12.31:0,12,251	0/0:25,0:25:2.49:0,2,10	0/0:21,0:21:2.43:0,2,12	1/1:37,0:37:0.37:576,0,0	0/0:20,0:20:32.76:0,33,545	0/0:27,0:27:73.42:0,73,1231	0/0:23,0:23:38.08:0,38,702	0/0:9,0:6:18.03:0,18,469
chr10	58803878	.	TCTCTCA	T	2108.87	PASS	AB=1.000;AC=13;AF=0.241;AN=54;BaseQRankSum=-6.179;DP=532;FS=4.160;HRun=0;HaplotypeScore=145.0744;InbreedingCoeff=0.5338;MQ=46.19;MQ0=25;MQRankSum=2.967;QD=12.05;ReadPosRankSum=1.701;VQSLOD=2.5004;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:16:5.98:0,6,55	0/0:15,0:13:17.92:0,18,278	./.	0/0:23,0:7:10.94:0,11,130	0/1:6,0:7:34.19:34,0,36	1/1:24,0:22:38:315,38,0	0/0:1,21:22:0:0,0,0	0/0:15,0:14:18.80:0,19,140	0/0:21,0:20:24.41:0,24,287	0/0:24,0:22:55.92:0,56,955	0/0:19,0:18:12:0,12,170	1/1:8,25:32:13.96:252,14,0	1/1:28,1:29:69.29:777,69,0	0/0:16,0:15:18.02:0,18,228	0/0:16,0:16:15.01:0,15,236	0/0:14,0:13:17.95:0,18,205	0/1:13,0:12:25.49:25,0,72	0/1:7,0:6:52.95:71,0,53	0/0:9,0:8:21.02:0,21,373	0/0:16,0:16:15.05:0,15,244	0/0:19,0:16:14.96:0,15,216	1/1:8,17:25:2.38:19,2,0	0/0:4,16:20:1.96:0,2,12	1/1:37,0:37:4.47:778,4,0	0/0:19,0:19:29.77:0,30,359	0/0:26,0:26:73.10:0,73,926	0/0:23,0:23:34.27:0,34,486	0/0:9,0:6:18.03:0,18,372
chr10	58803882	.	T	TCACACACACA	8374.41	PASS	AB=1.000;AC=37;AF=0.712;AN=52;BaseQRankSum=-5.372;DP=581;FS=1.308;HRun=0;HaplotypeScore=184.0275;InbreedingCoeff=0.7853;MQ=45.99;MQ0=21;MQRankSum=-1.493;QD=22.82;ReadPosRankSum=-3.621;VQSLOD=3.8201;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:32,0:26:7.10:121,7,0	1/1:16,0:14:9.03:234,9,0	1/1:9,0:1:2.04:6,2,0	0/0:15,0:7:17.52:0,18,367	1/1:10,0:10:11.99:120,12,0	0/0:23,0:21:39.13:0,39,1037	0/1:22,0:22:0:0,0,0	1/1:25,0:23:31.65:918,32,0	1/1:23,0:22:24.06:448,24,0	1/1:15,0:27:44.76:1090,45,0	1/1:20,0:19:5.82:222,6,0	0/0:31,0:30:11.86:0,12,284	0/0:28,0:28:44.73:0,45,1091	./.	1/1:18,0:18:14.99:243,15,0	1/1:17,0:16:18.05:407,18,0	1/1:12,0:13:9.03:342,9,0	1/1:10,0:9:17.65:470,18,0	1/1:9,2:11:12.04:337,12,0	./.	1/1:22,0:19:18.05:450,18,0	0/0:25,0:25:2.69:0,3,83	0/0:20,0:20:2.51:0,3,76	0/0:37,0:37:44.61:0,45,1096	1/1:20,0:20:18.05:577,18,0	1/1:32,0:32:60.15:1643,60,0	1/1:22,0:22:15:376,15,0	1/1:12,1:10:12.04:371,12,0
chr10	58804491	.	T	TC	1764.80	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.456;DP=751;FS=1.199;HRun=3;HaplotypeScore=80.7878;InbreedingCoeff=0.9994;MQ=91.03;MQ0=0;MQRankSum=-1.253;QD=35.30;ReadPosRankSum=3.094;VQSLOD=4.2874;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,132,1522	0/0:9,0:9:27.08:0,27,323	0/0:29,0:29:78.18:0,78,889	0/0:31,0:31:83.93:0,84,930	0/0:27,0:27:78.18:0,78,908	0/0:21,0:21:63.18:0,63,743	0/0:33,0:33:93.26:0,93,1093	0/0:25,0:25:69.21:0,69,828	1/1:0,34:34:93.31:1299,93,0	0/0:23,0:23:63.19:0,63,756	0/0:13,0:13:39.12:0,39,468	0/0:37,0:37:99:0,102,1209	0/0:20,0:20:60.16:0,60,706	0/0:26,0:26:75.23:0,75,897	0/0:30,0:30:90.24:0,90,1047	0/0:27,0:27:81.23:0,81,951	0/0:35,0:35:99:0,99,1151	1/1:1,15:16:42.14:587,42,0	0/0:16,0:16:41.48:0,41,467	0/0:28,0:28:78.23:0,78,925	0/0:44,0:44:99:0,126,1489	0/0:19,0:19:57.17:0,57,684	0/0:14,0:14:42.08:0,42,475	0/0:31,0:31:87.21:0,87,1006	0/0:28,0:28:75.20:0,75,877	0/0:38,0:38:99:0,111,1307	0/0:33,0:31:99:0,99,1159	0/0:14,0:14:42.13:0,42,502
chr10	58805079	.	A	AGAGCCTAATG	3630.96	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-3.048;DP=709;FS=1.634;HRun=0;HaplotypeScore=206.9903;InbreedingCoeff=0.9936;MQ=86.98;MQ0=0;MQRankSum=-8.370;QD=125.21;ReadPosRankSum=-0.709;VQSLOD=3.6247;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,141,4620	0/0:6,0:6:18.06:0,18,561	0/0:23,0:23:66.69:0,67,1710	0/0:26,0:26:75.21:0,75,2074	0/0:35,0:35:99:0,102,3324	0/0:24,0:24:69.19:0,69,2075	0/0:26,0:25:72.25:0,72,2362	0/0:32,0:32:93.30:0,93,2503	1/1:3,17:21:51.17:2501,51,0	0/0:37,0:37:99:0,105,3222	0/0:14,0:14:36.12:0,36,1103	0/0:33,0:33:93.31:0,93,2931	0/0:21,0:21:63.20:0,63,1892	0/0:25,0:25:69.24:0,69,2062	0/0:25,0:25:69.24:0,69,2302	0/0:27,0:27:78.25:0,78,2527	0/0:37,0:37:99:0,108,3397	1/1:3,5:8:23.75:1129,24,0	0/0:27,0:27:75.25:0,75,2197	0/0:28,0:28:84.28:0,84,2664	0/0:31,0:31:90.31:0,90,2847	0/0:22,0:22:54.18:0,54,1708	0/0:15,0:15:42.13:0,42,1224	0/0:27,0:27:81.28:0,81,2703	0/0:23,0:23:66.08:0,66,2073	0/0:33,0:33:96.32:0,96,3001	0/0:28,0:28:81.28:0,81,2598	0/0:8,0:8:24.08:0,24,801
chr10	58805500	.	C	CTT	1323.52	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=1.736;DP=556;FS=0.000;HRun=9;HaplotypeScore=64.6784;InbreedingCoeff=0.8649;MQ=79.12;MQ0=0;MQRankSum=0.232;QD=17.89;ReadPosRankSum=-0.226;VQSLOD=1.5728;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:66.09:0,66,685	0/0:4,0:4:12.03:0,12,128	0/0:16,0:17:17.47:0,17,151	0/1:9,0:9:3.97:4,0,43	0/0:23,0:23:48.07:0,48,511	0/0:24,0:24:51.08:0,51,543	0/0:16,0:16:45.09:0,45,470	0/0:36,0:36:78.03:0,78,806	1/1:3,14:18:39.13:600,39,0	0/0:25,0:25:57.09:0,57,601	0/0:16,0:16:42.09:0,42,447	0/0:17,0:17:51.13:0,51,543	0/0:26,0:26:66.15:0,66,702	0/0:13,0:13:33.07:0,33,351	0/0:21,0:21:63.11:0,63,647	1/1:1,0:22:49.91:171,50,0	0/0:16,0:16:48.08:0,48,499	1/1:4,20:25:45.15:693,45,0	0/0:22,0:22:45.06:0,45,479	0/0:15,0:15:39.06:0,39,407	0/0:18,0:18:45.08:0,45,471	0/0:16,0:17:30.06:0,30,375	0/0:25,0:25:66.14:0,66,702	0/0:21,0:21:60.12:0,60,631	0/0:18,0:18:48.10:0,48,511	0/0:29,0:29:75.16:0,75,791	0/0:30,0:30:87.11:0,87,893	0/0:7,0:7:18.04:0,18,192
chr10	58805985	.	GCT	G	626.21	PASS	AB=0.957;AC=31;AF=0.574;AN=54;BaseQRankSum=4.126;DP=489;FS=21.421;HRun=0;HaplotypeScore=102.0787;InbreedingCoeff=0.0630;MQ=78.75;MQ0=4;MQRankSum=0.471;QD=1.87;ReadPosRankSum=3.901;VQSLOD=-0.1482;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:19:4.71:28,5,0	0/0:8,0:8:2.57:0,3,10	./.	0/0:41,0:33:0.47:0,0,1	1/1:13,0:13:11.92:87,12,0	0/1:13,0:13:73.03:80,0,73	0/1:15,2:16:22.45:22,0,78	0/1:20,0:20:11.79:12,0,31	1/1:7,0:7:4.96:23,5,0	0/1:19,0:19:13.70:65,0,14	0/0:21,0:21:0:0,0,0	0/1:16,3:19:5.55:6,0,288	0/1:16,0:16:6.24:6,0,123	1/1:7,0:6:3.40:18,3,0	0/0:13,0:13:3.08:0,3,24	0/0:14,0:14:11.72:0,12,100	0/0:13,0:13:6.47:0,6,57	1/1:17,0:17:3.41:20,3,0	1/1:14,0:14:14.76:94,15,0	1/1:14,0:14:2.83:23,3,0	1/1:20,0:19:8.89:60,9,0	0/1:17,0:17:22.94:23,0,113	0/1:12,2:14:11.57:12,0,226	0/1:43,0:44:4.66:5,0,443	1/1:13,0:12:1.25:3,1,0	1/1:22,0:22:13.31:144,13,0	1/1:10,0:10:5.94:42,6,0	0/0:18,0:18:0.89:0,1,2
chr10	58806041	.	T	TGTGTGTGTGTGTGCGC	8904.05	PASS	AC=32;AF=0.615;AN=52;BaseQRankSum=6.969;DP=482;FS=2.327;HRun=0;HaplotypeScore=185.6172;InbreedingCoeff=0.7355;MQ=55.57;MQ0=8;MQRankSum=-8.968;QD=37.41;ReadPosRankSum=-1.653;VQSLOD=4.2187;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:24:2.88:71,3,0	1/1:2,0:10:5.17:388,5,0	0/0:10,0:4:5.92:0,6,40	0/0:10,0:4:6.02:0,6,187	./.	0/0:22,0:22:66.09:0,66,2512	0/0:33,0:33:83.32:0,83,3245	1/1:12,0:10:15.31:225,15,0	1/1:10,0:9:6.02:246,6,0	1/1:8,0:25:60.08:1972,60,0	1/1:7,4:24:1.41:2,1,0	0/0:21,0:21:51.17:0,51,1857	0/0:17,0:16:41.36:0,41,1488	1/1:7,0:16:2.31:259,2,0	1/1:3,1:9:3.01:215,3,0	1/1:9,0:9:8.58:227,9,0	1/1:7,0:16:24.07:721,24,0	1/1:11,0:11:24.08:1173,24,0	1/1:4,2:11:30.01:1123,30,0	1/1:2,0:13:2.99:24,3,0	./.	0/0:21,0:20:51.15:0,51,1899	0/0:20,0:20:51.17:0,51,2012	0/0:36,0:36:93.28:0,93,3425	0/0:3,0:16:0.47:0,0,1	1/1:9,0:17:42.14:1619,42,0	1/1:2,0:14:5.36:298,5,0	1/1:7,0:10:8.95:340,9,0
chr10	58806046	.	G	GCGCGCGCGCA	2413.13	PASS	AB=0.967;AC=16;AF=0.296;AN=54;BaseQRankSum=8.572;DP=450;FS=3.539;HRun=0;HaplotypeScore=135.6751;InbreedingCoeff=-0.2295;MQ=63.44;MQ0=8;MQRankSum=-6.764;QD=13.33;ReadPosRankSum=0.786;VQSLOD=2.1755;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:5.46:0,5,42	0/1:10,0:10:35.07:195,0,35	0/0:12,0:6:9.02:0,9,142	0/0:13,0:7:9.03:0,9,202	./.	0/0:19,0:19:37.09:0,37,1717	0/0:34,0:34:86.06:0,86,2568	0/1:14,0:14:64.21:64,0,83	1/1:1,0:8:3.01:61,3,0	0/1:20,0:20:99:301,0,106	0/1:16,0:16:11.90:12,0,19	0/0:20,0:20:48:0,48,1212	0/0:18,0:17:2.57:0,3,1008	0/1:11,0:11:47.80:48,0,85	0/1:9,0:8:18.94:52,0,19	0/1:9,0:8:2.73:3,0,14	0/1:16,0:16:50.88:404,0,51	0/1:2,7:13:1.92:734,0,2	0/1:12,0:11:64.85:325,0,65	0/1:10,0:10:4.89:5,0,18	0/0:24,0:22:12.36:0,12,83	0/0:21,0:20:52.68:0,53,1466	0/0:21,0:21:44.63:0,45,1438	0/0:35,0:35:95.13:0,95,2570	0/0:17,0:17:14.85:0,15,108	0/1:12,0:12:99:240,0,102	0/1:15,0:15:11.40:68,0,11	0/1:5,0:5:28.95:50,0,29
chr10	58807920	.	T	TA	11548.26	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=3.622;DP=871;FS=11.182;HRun=6;HaplotypeScore=118.8318;InbreedingCoeff=0.9999;MQ=87.62;MQ0=0;MQRankSum=-1.231;QD=32.90;ReadPosRankSum=1.738;VQSLOD=3.1683;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,111,1132	0/0:17,0:17:45.10:0,45,459	0/0:31,0:31:75.14:0,75,752	0/0:30,0:30:63.09:0,63,661	0/0:22,0:22:48.10:0,48,490	0/0:24,0:24:60.13:0,60,612	0/0:36,0:36:93.20:0,93,949	0/0:35,0:35:96.19:0,96,969	0/0:27,0:27:75.17:0,75,765	1/1:2,39:41:99:1409,114,0	1/1:2,16:18:45.14:566,45,0	0/0:24,0:24:66.15:0,66,673	0/0:24,1:25:31.38:0,31,625	1/1:4,27:31:84.27:1049,84,0	1/1:2,27:29:69.22:868,69,0	0/0:38,0:38:99:0,99,1010	0/0:41,0:41:99:0,108,1094	0/0:35,0:35:99:0,99,991	1/1:4,26:30:81.26:1019,81,0	1/1:1,30:31:90.29:1132,90,0	1/1:8,41:49:99:1509,120,0	0/0:24,0:24:63.13:0,63,636	0/0:24,0:24:63.13:0,63,636	0/0:45,0:45:99:0,126,1275	1/1:3,29:32:87.28:1094,87,0	1/1:8,34:42:74.72:1253,75,0	1/1:3,31:34:90.28:1120,90,0	1/1:0,14:14:42.13:528,42,0
chr10	58811458	.	TCATCAC	T	15484.82	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=19.829;DP=682;FS=6.303;HRun=0;HaplotypeScore=258.9155;InbreedingCoeff=0.9818;MQ=71.09;MQ0=0;MQRankSum=-19.163;QD=38.62;ReadPosRankSum=3.769;VQSLOD=3.7404;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:27:66.14:1125,66,0	1/1:7,0:7:18:265,18,0	0/0:18,0:18:33.57:0,34,1281	0/0:21,0:21:57.19:0,57,1573	1/1:26,0:26:36.12:663,36,0	0/0:24,0:24:69.24:0,69,2448	0/0:32,0:32:90.30:0,90,3104	1/1:24,2:26:45.13:778,45,0	1/1:28,0:28:69.22:1266,69,0	1/1:19,1:20:48.16:867,48,0	1/1:17,1:18:42.14:789,42,0	0/0:36,0:36:96.32:0,96,3282	0/0:28,0:28:81.25:0,81,2702	1/1:29,0:29:84.26:1510,84,0	1/1:30,0:30:72.24:1328,72,0	1/1:21,0:21:57.15:1036,57,0	1/1:22,0:22:27.09:504,27,0	0/0:26,0:26:78.27:0,78,2716	1/1:16,0:16:18.06:337,18,0	1/1:21,0:21:50.94:824,51,0	1/1:18,0:17:29.91:430,30,0	0/0:27,0:27:78.25:0,78,2579	0/0:16,0:16:48.16:0,48,1655	0/0:53,0:53:99:0,160,5586	1/1:27,0:27:36.11:640,36,0	1/1:32,0:32:84.27:1528,84,0	1/1:29,0:29:81.21:1482,81,0	1/1:4,0:4:6.02:114,6,0
chr10	58811461	.	TCAC	T	12969.74	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=20.011;DP=591;FS=6.406;HRun=0;HaplotypeScore=214.2556;InbreedingCoeff=0.9807;MQ=75.01;MQ0=0;MQRankSum=-19.707;QD=41.30;ReadPosRankSum=4.723;VQSLOD=5.3271;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,21:22:63.16:954,63,0	1/1:2,4:6:15.01:211,15,0	0/0:15,0:15:42.06:0,42,855	0/0:23,0:23:56.97:0,57,1085	1/1:3,17:21:36.09:520,36,0	0/0:25,0:25:72.23:0,72,1613	0/0:30,0:30:87.30:0,87,2005	1/1:2,13:15:39.13:636,39,0	1/1:1,22:23:69.23:1081,69,0	1/1:2,15:17:48.16:758,48,0	1/1:1,16:17:42.14:651,42,0	0/0:33,0:33:96.30:0,96,2120	0/0:27,0:27:75.26:0,75,1726	1/1:2,26:28:78.26:1211,78,0	1/1:1,23:24:69.23:1082,69,0	1/1:1,18:19:57.15:872,57,0	1/1:1,11:12:27.09:431,27,0	0/0:26,0:26:78.27:0,78,1770	1/1:0,6:6:18.06:295,18,0	1/1:2,17:19:48.06:704,48,0	1/1:0,13:13:29.94:392,30,0	0/0:27,0:27:75.24:0,75,1665	0/0:16,0:16:48.16:0,48,1089	0/0:55,0:55:99:0,163,3641	1/1:1,12:13:33.11:519,33,0	1/1:1,28:29:81.27:1290,81,0	1/1:0,28:28:81.22:1266,81,0	1/1:0,2:2:6.02:97,6,0
chr10	58811468	.	GAACT	G	16611.14	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=20.459;DP=598;FS=8.086;HRun=0;HaplotypeScore=213.1065;InbreedingCoeff=0.9796;MQ=77.70;MQ0=0;MQRankSum=-19.890;QD=53.76;ReadPosRankSum=6.090;VQSLOD=4.4925;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,21:22:63.21:1209,63,0	1/1:0,4:4:12.04:239,12,0	0/0:17,0:17:51.17:0,51,1292	0/0:22,0:22:63.22:0,63,1526	1/1:4,17:21:39.09:695,39,0	0/0:25,0:25:75.26:0,75,2089	0/0:33,0:33:99:0,99,2647	1/1:0,13:13:39.13:794,39,0	1/1:0,22:22:66.23:1300,66,0	1/1:0,15:16:48.16:940,48,0	1/1:0,16:17:42.14:818,42,0	0/0:35,0:35:99:0,105,2857	0/0:26,0:26:78.25:0,78,2094	1/1:0,26:26:78.27:1521,78,0	1/1:0,23:23:69.24:1357,69,0	1/1:0,18:19:57.20:1109,57,0	1/1:1,11:12:30.06:558,30,0	0/0:28,0:28:84.29:0,84,2304	1/1:0,9:9:27.07:472,27,0	1/1:0,18:18:48.16:924,48,0	1/1:0,13:13:30.10:560,30,0	0/0:27,0:27:78.25:0,78,2064	0/0:18,0:18:54.17:0,54,1457	0/0:58,0:58:99:0,175,4906	1/1:1,12:14:39.13:737,39,0	1/1:1,28:29:84.29:1643,84,0	1/1:0,28:28:81.28:1614,81,0	1/1:0,2:2:6.02:121,6,0
chr10	58812112	.	TTTTG	T	7801.21	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=10.118;DP=631;FS=1.154;HRun=0;HaplotypeScore=157.5301;InbreedingCoeff=0.9890;MQ=69.02;MQ0=16;MQRankSum=-7.945;QD=31.84;ReadPosRankSum=2.278;VQSLOD=4.5427;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:40:60.05:0,60,951	0/0:16,0:16:32.11:0,32,518	0/0:43,0:25:23.23:0,23,373	0/0:33,0:22:17.36:0,17,314	0/0:29,0:29:76.68:0,77,1209	0/0:22,0:22:57.15:0,57,1199	0/0:17,0:17:51.14:0,51,1074	0/0:23,0:20:36.08:0,36,558	0/0:12,0:12:24.07:0,24,430	1/1:18,8:26:57.07:799,57,0	1/1:3,16:19:43.42:558,43,0	0/0:14,0:14:42.14:0,42,1004	0/0:17,0:17:45.15:0,45,1096	1/1:3,14:17:27.05:460,27,0	1/1:6,16:22:30.03:495,30,0	1/1:16,0:16:42.12:660,42,0	0/0:27,0:24:48.15:0,48,879	0/0:25,0:25:52.45:0,52,1147	1/1:10,1:10:20.87:209,21,0	1/1:9,13:21:57.15:903,57,0	1/1:1,4:5:9.03:153,9,0	0/0:16,0:16:41.20:0,41,963	0/0:24,0:24:66.14:0,66,1351	0/0:27,0:26:72.19:0,72,1570	1/1:14,17:31:87.24:1370,87,0	1/1:3,12:14:33.06:507,33,0	1/1:7,30:33:57.19:961,57,0	1/1:3,21:23:45.15:725,45,0
chr10	58812120	.	GTTT	G	1365.99	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=14.003;DP=638;FS=3.677;HRun=3;HaplotypeScore=169.8590;InbreedingCoeff=0.3783;MQ=63.72;MQ0=18;MQRankSum=-9.866;QD=5.99;ReadPosRankSum=6.705;VQSLOD=-0.0943;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:38:63.22:0,63,1341	0/0:16,0:16:40.10:0,40,720	0/0:38,0:20:37.49:0,37,659	0/0:33,0:19:31.31:0,31,642	0/0:34,0:33:93.31:0,93,1917	0/0:25,0:25:69.23:0,69,1533	0/0:20,0:20:57.20:0,57,1329	0/0:22,0:19:54.14:0,54,999	0/0:12,0:12:24.08:0,24,551	0/1:25,0:25:79.80:80,0,192	0/1:20,0:20:63.21:63,0,158	0/0:15,0:15:45.15:0,45,1065	0/0:17,0:17:51.16:0,51,1171	0/1:16,0:16:46.86:81,0,47	0/1:21,0:21:56.32:73,0,56	1/1:7,11:18:32.36:454,32,0	0/0:32,0:29:54.16:0,54,1131	0/0:21,0:21:60.68:0,61,1368	0/0:13,0:11:7.80:0,8,148	0/1:21,0:20:1.89:148,0,2	1/1:4,0:4:8.23:37,8,0	0/0:18,0:18:50.24:0,50,1122	0/0:25,0:25:75.21:0,75,1661	0/0:27,0:26:78.25:0,78,1792	0/1:33,0:33:46.34:209,0,46	0/1:14,0:13:31.54:75,0,32	1/1:34,0:30:13.16:181,13,0	1/1:22,0:21:32.14:142,32,0
chr10	58812125	.	T	TTTGG	4800.93	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=-11.207;DP=645;FS=0.000;HRun=0;HaplotypeScore=170.9324;InbreedingCoeff=0.8785;MQ=62.48;MQ0=19;MQRankSum=4.323;QD=26.82;ReadPosRankSum=0.660;VQSLOD=4.5294;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,35:43:42.14:1052,42,0	1/1:3,12:15:18.06:414,18,0	0/0:40,0:18:12.14:0,12,220	0/0:37,0:20:5.89:0,6,120	1/1:13,20:33:42.97:1156,43,0	0/0:25,0:25:57.13:0,57,844	0/0:21,0:21:48.02:0,48,663	1/1:9,15:21:45.06:693,45,0	1/1:1,14:15:21.07:527,21,0	0/0:25,0:25:50.93:0,51,521	0/0:18,0:18:35.81:0,36,344	0/0:16,0:16:42.13:0,42,681	0/0:18,0:18:51.12:0,51,761	0/0:17,0:17:33.02:0,33,337	0/0:18,0:18:30.01:0,30,306	0/1:15,0:15:6.46:6,0,73	1/1:6,24:29:39.13:954,39,0	0/0:22,0:22:54:0,54,768	0/0:14,0:12:20.48:0,20,151	0/0:22,0:21:46.47:0,46,471	0/0:4,0:4:9.02:0,9,93	0/0:18,0:18:45.08:0,45,635	0/0:24,0:24:51.15:0,51,817	0/0:25,0:24:60.18:0,60,962	0/0:32,0:32:84:0,84,920	0/0:14,0:13:35.84:0,36,356	0/0:32,0:29:59.88:0,60,625	0/0:22,0:21:36.08:0,36,388
chr10	58812155	.	TTG	T	683.34	PASS	AB=0.973;AC=14;AF=0.250;AN=56;BaseQRankSum=10.602;DP=610;FS=1.524;HRun=0;HaplotypeScore=168.6507;InbreedingCoeff=0.0042;MQ=53.12;MQ0=14;MQRankSum=-10.548;QD=3.19;ReadPosRankSum=-2.447;VQSLOD=2.3583;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:36:60.13:0,60,937	0/0:9,0:9:24.04:0,24,370	0/0:46,0:20:26.49:0,26,386	0/0:41,0:9:20.97:0,21,235	0/0:31,0:31:87.20:0,87,1272	0/0:19,0:19:56.93:0,57,908	0/0:17,0:17:45.09:0,45,720	0/0:27,0:27:75.11:0,75,1013	0/0:15,0:15:36.08:0,36,572	0/1:20,1:21:25.14:88,0,25	0/1:16,0:16:18.76:55,0,19	0/0:13,0:13:32.96:0,33,476	0/0:19,0:19:57.18:0,57,902	0/1:17,0:17:24.69:25,0,47	0/1:17,0:17:23.86:24,0,54	0/1:17,0:17:16.25:16,0,100	0/0:33,0:30:63.21:0,63,1029	0/0:21,0:21:59.64:0,60,809	0/1:17,1:15:44.53:67,0,45	0/1:16,3:19:42.60:142,0,43	0/1:6,0:6:6.19:18,0,6	0/0:16,0:16:48.05:0,48,684	0/0:23,0:23:69.24:0,69,1144	0/0:29,0:27:78.23:0,78,1236	0/1:26,1:27:42.49:151,0,42	1/1:20,1:20:8.09:84,8,0	0/1:24,0:24:52.73:86,0,53	1/1:10,1:11:2.01:86,2,0
chr10	58812156	.	TG	T	3696.15	PASS	AB=0.687;AC=22;AF=0.393;AN=56;BaseQRankSum=14.896;DP=610;FS=7.608;HRun=1;HaplotypeScore=150.2454;InbreedingCoeff=0.8183;MQ=53.05;MQ0=14;MQRankSum=-14.084;QD=17.03;ReadPosRankSum=0.698;VQSLOD=3.4443;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:36:60.11:0,60,741	0/0:9,0:9:24.03:0,24,292	0/0:46,0:20:18.99:0,19,250	0/0:40,1:9:20.48:0,20,164	0/0:32,0:32:90.18:0,90,1054	0/0:20,0:19:51.24:0,51,694	0/0:15,0:15:45.13:0,45,566	0/0:26,0:26:75.11:0,75,851	0/0:15,0:15:36.10:0,36,451	1/1:11,11:22:27.72:457,28,0	1/1:7,9:16:30.05:270,30,0	0/0:11,0:11:31.90:0,32,377	0/0:19,0:19:57.14:0,57,694	1/1:9,8:17:19.29:272,19,0	1/1:10,7:17:21.76:235,22,0	0/1:8,9:17:34.39:246,0,34	0/0:33,0:30:63.14:0,63,792	0/0:20,0:21:57.50:0,58,645	0/1:11,7:15:12.80:220,0,13	1/1:10,9:19:21.53:289,22,0	1/1:4,2:6:2.43:72,2,0	0/0:16,0:16:48.04:0,48,551	0/0:23,0:23:69.22:0,69,892	0/0:29,0:27:78.08:0,78,985	1/1:14,13:27:39.32:549,39,0	1/1:7,14:20:42.41:455,42,0	1/1:15,11:26:14.19:313,14,0	1/1:4,7:11:20.55:318,21,0
chr10	58812162	.	G	GT	2679.46	PASS	AB=0.800;AC=23;AF=0.411;AN=56;BaseQRankSum=15.532;DP=629;FS=25.279;HRun=6;HaplotypeScore=157.6981;InbreedingCoeff=0.8452;MQ=51.25;MQ0=10;MQRankSum=-14.981;QD=12.18;ReadPosRankSum=0.078;VQSLOD=1.0225;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:51.11:0,51,518	0/0:10,0:10:24.05:0,24,245	0/0:41,0:20:9.15:0,9,137	0/0:35,0:9:3.18:0,3,39	0/0:35,0:35:87.16:0,87,878	0/0:20,0:19:51.07:0,51,508	0/0:19,0:19:54.12:0,54,550	0/0:27,0:27:69.14:0,69,697	0/0:15,0:15:30.05:0,30,300	1/1:19,3:22:50.24:363,50,0	1/1:15,1:16:15.44:133,15,0	0/0:14,0:14:38.67:0,39,376	0/0:21,0:21:63.12:0,63,635	1/1:17,3:19:5.02:185,5,0	1/1:12,4:17:4.75:231,5,0	0/1:11,4:16:12.60:204,0,13	0/0:32,0:31:62.04:0,62,637	0/0:22,0:22:54.12:0,54,550	1/1:14,5:16:27.52:302,28,0	1/1:13,7:20:48:374,48,0	1/1:5,1:6:8.49:60,8,0	0/0:18,0:18:48.10:0,48,489	0/0:23,0:23:66.14:0,66,672	0/0:32,0:30:80.93:0,81,825	1/1:22,3:26:43.66:383,44,0	1/1:20,2:21:41.40:271,41,0	1/1:17,6:25:21.18:277,21,0	1/1:9,2:11:12.43:111,12,0
chr10	58812165	.	TTTTG	T	4696.93	PASS	AB=0.988;AC=22;AF=0.393;AN=56;BaseQRankSum=15.643;DP=641;FS=23.885;HRun=0;HaplotypeScore=182.2429;InbreedingCoeff=0.7172;MQ=51.24;MQ0=14;MQRankSum=-15.011;QD=17.93;ReadPosRankSum=1.140;VQSLOD=2.5637;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:66.21:0,66,1372	0/0:10,0:10:27.09:0,27,641	0/0:42,0:20:17.42:0,17,336	0/1:45,0:9:0.87:1,0,80	0/0:35,0:35:96.29:0,96,2182	0/0:20,0:19:57.14:0,57,1079	0/0:21,0:21:60.20:0,60,1293	0/0:27,0:26:71.74:0,72,1586	0/0:16,0:16:33.09:0,33,709	1/1:16,5:21:53.18:699,53,0	1/1:15,1:16:19.20:231,19,0	0/0:14,0:14:41.73:0,42,949	0/0:23,0:23:69.22:0,69,1512	0/1:18,0:18:18.42:274,0,18	0/1:19,1:20:46.16:417,0,46	0/1:16,0:16:69.86:323,0,70	0/0:30,0:30:57.22:0,57,1298	0/0:21,0:21:57.17:0,57,1300	1/1:19,0:16:29.25:421,29,0	1/1:19,0:19:48.30:566,48,0	1/1:4,1:5:9:128,9,0	0/0:19,0:19:54.18:0,54,1260	0/0:26,0:26:75.24:0,75,1730	0/0:33,0:31:87.28:0,87,1917	1/1:26,0:26:29.63:510,30,0	1/1:21,1:21:45.19:441,45,0	1/1:22,1:23:24.52:505,25,0	1/1:11,0:11:12.50:182,12,0
chr10	58812166	.	T	TG	3824.43	PASS	AB=0.760;AC=19;AF=0.339;AN=56;BaseQRankSum=15.221;DP=632;FS=39.550;HRun=0;HaplotypeScore=149.4822;InbreedingCoeff=0.5222;MQ=50.68;MQ0=14;MQRankSum=-14.844;QD=18.39;ReadPosRankSum=3.112;VQSLOD=1.7066;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:72.10:0,72,880	0/0:10,0:10:30.06:0,30,384	0/0:43,0:21:18.25:0,18,333	0/0:41,0:9:16.99:0,17,112	0/0:34,0:34:99:0,99,1319	0/0:20,0:19:60.17:0,60,784	0/0:21,0:21:60.18:0,60,805	0/0:28,0:27:75.70:0,76,1017	0/0:17,0:17:39:0,39,499	1/1:11,10:21:56.80:606,57,0	0/1:8,7:15:17.67:204,0,18	0/0:15,0:15:42.13:0,42,565	0/0:23,0:23:69.20:0,69,930	0/1:14,5:18:17.55:216,0,18	0/1:14,6:20:19.66:302,0,20	0/1:10,6:16:28.17:278,0,28	0/0:31,0:30:66.01:0,66,891	0/0:22,0:22:60.11:0,60,779	1/1:11,7:15:0.29:277,0,0	1/1:10,9:19:53.08:481,53,0	1/1:3,2:5:5.96:77,6,0	0/0:19,0:19:57.17:0,57,753	0/0:26,0:26:78.22:0,78,1027	0/0:34,0:32:89.99:0,90,1205	1/1:12,14:26:40.15:575,40,0	1/1:10,9:18:38.68:406,39,0	0/1:19,5:23:4.39:288,0,4	1/1:3,3:6:0.66:115,1,0
chr10	58812188	.	TGG	T	1439.62	PASS	AB=0.723;AC=13;AF=0.232;AN=56;BaseQRankSum=10.200;DP=636;FS=0.000;HRun=2;HaplotypeScore=145.9499;InbreedingCoeff=-0.1870;MQ=53.82;MQ0=14;MQRankSum=-4.991;QD=6.89;ReadPosRankSum=1.425;VQSLOD=0.2263;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:78.27:0,78,1442	0/0:9,0:9:27.09:0,27,495	0/0:39,0:15:42.04:0,42,666	0/0:39,0:9:2.29:0,2,136	0/0:36,0:36:99:0,108,2004	0/0:19,0:18:54.17:0,54,975	0/0:19,0:19:57.17:0,57,993	0/0:36,0:35:96.76:0,97,1714	0/0:14,0:14:33.08:0,33,586	0/1:22,3:25:99:154,0,275	0/1:8,9:17:99:172,0,234	0/0:18,0:18:54.19:0,54,1014	0/0:20,0:20:60.21:0,60,1100	0/1:11,8:18:99:191,0,263	0/1:9,10:19:99:198,0,115	0/1:7,8:15:83.58:84,0,297	0/0:29,0:28:62.38:0,62,1080	0/0:25,0:24:66.22:0,66,1244	0/1:13,4:14:82.10:82,0,166	0/1:20,6:26:99:217,0,261	1/1:3,4:7:1.08:24,1,0	0/0:23,0:23:69.24:0,69,1302	0/0:29,0:28:84.29:0,84,1589	0/0:32,0:31:86.59:0,87,1523	0/1:17,3:20:63.84:64,0,166	0/1:9,10:18:99:136,0,192	0/1:8,11:19:64.35:204,0,64	0/1:2,3:5:24.63:65,0,25
chr10	58812192	.	T	TG	1422.64	PASS	AB=0.685;AC=13;AF=0.232;AN=56;BaseQRankSum=10.405;DP=658;FS=6.627;HRun=0;HaplotypeScore=137.9231;InbreedingCoeff=-0.2893;MQ=53.93;MQ0=14;MQRankSum=-3.874;QD=5.37;ReadPosRankSum=0.621;VQSLOD=3.2092;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:84.24:0,84,1120	0/0:9,0:9:27.09:0,27,377	0/0:39,0:16:41.64:0,42,495	0/1:38,0:10:24.06:24,0,134	0/0:36,0:36:99:0,105,1450	0/0:19,0:18:54.14:0,54,733	0/0:19,0:19:51.17:0,51,713	0/0:36,0:34:99:0,100,1309	0/0:14,0:14:33.10:0,33,432	0/1:14,3:25:99:115,0,237	0/1:10,9:19:99:195,0,174	0/0:20,0:20:60.18:0,60,806	0/0:20,0:20:60.19:0,60,823	0/1:14,8:22:99:178,0,194	0/1:7,10:18:47.68:161,0,48	0/1:10,8:18:99:153,0,209	0/0:29,0:28:47.20:0,47,765	0/0:24,0:23:69.22:0,69,946	0/1:14,4:17:94.42:94,0,138	0/1:11,6:28:99:190,0,208	0/1:3,4:7:11.87:12,0,12	0/0:23,0:23:69.23:0,69,957	0/0:31,0:30:90.28:0,90,1227	0/0:32,0:31:85.06:0,85,1097	0/1:10,3:24:90.05:90,0,111	0/1:10,10:19:99:133,0,139	0/1:8,11:19:39.47:184,0,39	0/1:1,3:5:20.25:49,0,20
chr10	58813224	.	T	TTCC	4585.20	PASS	AB=1.000;AC=25;AF=0.463;AN=54;BaseQRankSum=2.881;DP=496;FS=13.526;HRun=0;HaplotypeScore=118.8302;InbreedingCoeff=0.8446;MQ=56.60;MQ0=14;MQRankSum=-5.516;QD=23.88;ReadPosRankSum=-0.365;VQSLOD=4.2602;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:62.55:0,63,798	./.	0/0:38,0:14:10.75:0,11,103	0/0:24,0:13:7.92:0,8,98	0/1:12,0:12:11.62:12,0,231	0/0:23,0:22:52.82:0,53,694	0/0:24,0:22:50.75:0,51,645	0/0:25,0:23:18.63:0,19,425	0/0:6,0:6:15.05:0,15,211	1/1:12,5:16:34.76:535,35,0	1/1:10,1:10:12.72:208,13,0	0/0:19,0:19:43.09:0,43,556	0/0:23,0:22:17.56:0,18,618	1/1:6,11:17:36.12:723,36,0	1/1:16,4:20:26.68:531,27,0	1/1:22,0:21:19.67:384,20,0	0/0:12,0:12:18.06:0,18,255	0/0:11,0:11:6.21:0,6,226	1/1:9,3:9:24.04:333,24,0	1/1:8,6:14:24.55:460,25,0	1/1:11,2:12:9:145,9,0	0/0:22,0:22:28.87:0,29,377	0/0:12,0:12:17.69:0,18,245	0/0:33,0:33:63.18:0,63,892	1/1:15,0:15:22.32:250,22,0	1/1:8,14:21:40.95:795,41,0	1/1:3,7:10:9.03:186,9,0	1/1:7,0:7:2.80:24,3,0
chr10	58813259	.	CCCCCT	C	2562.01	PASS	AB=0.850;AC=16;AF=0.296;AN=54;BaseQRankSum=3.003;DP=567;FS=43.599;HRun=0;HaplotypeScore=168.5551;InbreedingCoeff=-0.4154;MQ=39.64;MQ0=22;MQRankSum=-4.948;QD=8.21;ReadPosRankSum=2.370;VQSLOD=1.5269;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:60.08:0,60,1323	./.	0/0:39,0:2:6:0,6,92	0/0:32,0:8:13.24:0,13,214	0/1:15,1:14:5.07:5,0,365	0/1:26,0:23:23.42:23,0,823	0/0:26,0:23:2.51:0,3,1188	0/0:33,1:29:20.85:0,21,1308	0/0:8,0:7:14.77:0,15,312	0/1:19,7:23:99:244,0,373	0/1:8,6:13:99:190,0,100	0/1:20,0:19:13.09:13,0,607	0/1:27,0:25:20.31:20,0,972	0/1:11,11:21:72.54:567,0,73	0/1:20,3:22:99:147,0,650	0/1:17,6:20:99:372,0,539	0/0:8,0:9:15.03:0,15,276	0/0:11,0:9:27.09:0,27,697	0/1:11,5:12:99:277,0,309	0/1:10,10:19:99:257,0,298	0/1:10,3:11:7.69:46,0,8	0/0:26,0:26:26.87:0,27,1102	0/0:17,0:16:29.06:0,29,304	0/0:27,0:26:59.87:0,60,1359	0/1:21,4:24:99:145,0,587	0/1:19,6:24:99:303,0,476	0/1:8,1:9:83.20:83,0,107	0/1:6,0:6:20.39:20,0,197
chr10	58813972	.	CA	C	658.82	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.891;DP=730;FS=0.900;HRun=1;HaplotypeScore=70.3677;InbreedingCoeff=0.9978;MQ=83.73;MQ0=0;MQRankSum=-1.602;QD=26.35;ReadPosRankSum=1.658;VQSLOD=3.5880;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:75.13:0,75,1116	0/0:12,0:12:36.12:0,36,574	0/0:24,0:24:72.08:0,72,1024	0/0:22,0:22:63.04:0,63,886	0/0:19,0:19:54.18:0,54,841	0/0:31,0:31:87.28:0,87,1364	0/0:20,0:20:57.18:0,57,884	0/0:39,0:39:99:0,117,1703	0/0:30,0:30:90.29:0,90,1412	0/0:32,0:32:93.27:0,93,1435	0/0:14,0:14:39.12:0,39,587	0/0:29,0:29:84.24:0,84,1270	0/0:33,0:33:93.32:0,93,1481	0/0:21,0:21:63.21:0,63,1000	0/0:31,0:31:93.25:0,93,1390	1/1:0,25:25:54.18:754,54,0	0/0:28,0:28:84.23:0,84,1262	0/0:18,0:18:54.14:0,54,832	0/0:16,0:16:48.13:0,48,683	0/0:40,0:39:99:0,117,1707	0/0:37,0:37:99:0,111,1721	0/0:28,0:28:84.26:0,84,1310	0/0:26,0:26:78.25:0,78,1218	0/0:25,0:25:72.25:0,72,1149	0/0:27,0:27:78.10:0,78,1102	0/0:33,0:33:99:0,99,1485	0/0:32,0:32:96.27:0,96,1435	0/0:11,0:11:24.08:0,24,383
chr10	58814202	.	GTC	G	3613.76	PASS	AB=0.969;AC=32;AF=0.615;AN=52;BaseQRankSum=8.127;DP=580;FS=0.000;HRun=0;HaplotypeScore=184.9664;InbreedingCoeff=0.7859;MQ=76.18;MQ0=7;MQRankSum=-5.325;QD=11.19;ReadPosRankSum=0.232;VQSLOD=3.4006;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:13,5:18:32.87:347,33,0	1/1:5,4:9:21.02:238,21,0	0/0:46,0:27:31.05:0,31,355	0/0:64,0:36:18:0,18,312	1/1:3,10:13:30:329,30,0	0/0:20,0:20:39.12:0,39,580	0/1:28,1:29:19.27:19,0,688	1/1:7,16:23:48.15:582,48,0	1/1:3,11:14:21.06:254,21,0	1/1:20,0:20:42.59:269,43,0	1/1:17,0:17:16.27:77,16,0	0/0:17,0:17:36.12:0,36,543	0/0:10,0:10:12.04:0,12,162	1/1:20,0:20:13.01:173,13,0	1/1:24,0:24:25.60:126,26,0	1/1:18,0:18:28.50:144,29,0	1/1:16,5:21:38.95:396,39,0	0/0:24,0:24:60.20:0,60,936	0/1:9,0:9:14.63:30,0,15	1/1:19,0:19:14.20:69,14,0	./.	0/0:22,0:21:51.17:0,51,801	0/0:18,0:17:30.09:0,30,445	0/0:26,1:26:0.91:0,1,663	1/1:29,0:29:32.91:277,33,0	1/1:21,0:21:31.54:172,32,0	1/1:18,0:18:22.68:111,23,0	./.
chr10	58814212	.	CTCTCTCTCTT	C	6142.64	PASS	AB=1.000;AC=20;AF=0.370;AN=54;BaseQRankSum=9.985;DP=597;FS=3.786;HRun=0;HaplotypeScore=264.2826;InbreedingCoeff=0.8056;MQ=67.05;MQ0=8;MQRankSum=-8.423;QD=28.44;ReadPosRankSum=4.733;VQSLOD=4.1558;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:17:27.29:0,27,666	0/1:11,0:11:0.07:0,0,355	0/0:39,0:20:48.07:0,48,1127	0/0:61,0:33:33.12:0,33,930	0/0:18,0:17:9.67:0,10,465	0/0:21,0:21:46.24:0,46,1453	0/0:30,0:28:67.98:0,68,2329	0/0:23,0:23:63.18:0,63,1754	0/0:15,0:15:16.56:0,17,384	1/1:20,0:19:23.19:806,23,0	1/1:18,0:18:18.06:333,18,0	0/0:17,0:17:36.59:0,37,1406	0/0:9,0:9:13.19:0,13,343	1/1:22,0:22:36.12:734,36,0	1/1:25,1:24:27.09:568,27,0	1/1:6,9:15:30.10:907,30,0	0/0:20,0:20:19.88:0,20,695	0/0:23,0:23:66.20:0,66,2186	0/1:12,0:12:33.59:206,0,34	1/1:21,1:20:15.05:274,15,0	0/0:5,0:5:0.47:0,0,1	0/0:26,0:25:57.18:0,57,2199	0/0:21,0:19:35.58:0,36,1091	0/0:31,0:30:59.93:0,60,1991	1/1:31,0:31:39.70:1103,40,0	1/1:18,0:18:6.93:706,7,0	1/1:21,0:21:5.50:505,5,0	./.
chr10	58814214	.	CTCTCTCTT	C	7653.82	PASS	AC=22;AF=0.407;AN=54;BaseQRankSum=6.578;DP=595;FS=4.427;HRun=0;HaplotypeScore=245.7817;InbreedingCoeff=0.9412;MQ=63.48;MQ0=10;MQRankSum=-7.160;QD=36.62;ReadPosRankSum=3.837;VQSLOD=4.2589;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:17:36.89:0,37,549	0/0:12,0:12:5.35:0,5,300	0/0:38,0:19:34.38:0,34,778	0/0:58,0:30:21.61:0,22,630	0/0:19,0:18:29.02:0,29,407	0/0:22,0:22:43.23:0,43,1123	0/0:30,0:28:67.98:0,68,1821	0/0:23,0:23:66.03:0,66,1300	0/0:15,0:15:25.89:0,26,340	1/1:15,4:18:46.29:1088,46,0	1/1:11,7:18:18.06:466,18,0	0/0:16,0:16:36.59:0,37,1094	0/0:9,0:9:11.92:0,12,233	1/1:16,7:23:39.12:959,39,0	1/1:24,1:23:27.09:684,27,0	1/1:12,1:13:30.10:771,30,0	0/0:20,0:20:10.58:0,11,474	0/0:23,0:23:63.15:0,63,1572	1/1:10,1:11:23.96:340,24,0	1/1:22,1:20:15.05:356,15,0	1/1:3,1:4:2.99:24,3,0	0/0:27,0:25:53.23:0,53,1769	0/0:21,0:19:35.35:0,35,783	0/0:30,0:29:58.99:0,59,1578	1/1:25,6:31:60.19:1493,60,0	1/1:17,3:19:44.93:870,45,0	1/1:22,0:22:28.24:602,28,0	./.
chr10	58814217	.	TCTCTTTCTCACACACA	T	13424.71	PASS	AB=1.000;AC=34;AF=0.630;AN=54;BaseQRankSum=4.001;DP=578;FS=4.794;HRun=0;HaplotypeScore=287.2584;InbreedingCoeff=0.0347;MQ=62.95;MQ0=10;MQRankSum=-8.952;QD=30.86;ReadPosRankSum=0.194;VQSLOD=3.5389;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:17,0:15:49.80:50,0,462	0/1:12,0:12:99:160,0,252	0/0:37,0:18:34.86:0,35,789	0/0:47,0:24:29.08:0,29,634	0/1:19,0:18:99:144,0,307	0/1:21,0:21:99:159,0,1158	0/1:32,0:30:99:150,0,1791	0/0:23,0:23:18.68:0,19,1198	0/1:15,0:15:27.88:28,0,253	1/1:16,3:18:47.26:1692,47,0	1/1:10,6:16:18.06:692,18,0	0/1:16,0:16:31.37:31,0,1171	0/1:10,0:10:52.55:53,0,311	1/1:18,5:23:39.12:1474,39,0	1/1:5,20:23:27.09:1182,27,0	1/1:11,0:11:30.10:861,30,0	0/1:21,0:21:99:128,0,477	0/1:24,0:24:8.72:9,0,1678	1/1:7,2:9:24:560,24,0	1/1:9,14:21:18.06:730,18,0	1/1:4,0:4:2.99:24,3,0	0/1:26,0:24:45.60:46,0,1832	0/1:21,0:19:93.37:93,0,909	0/0:29,0:28:22.55:0,23,1555	1/1:19,11:30:60.19:2107,60,0	1/1:13,7:19:48.12:1742,48,0	1/1:6,14:20:33.58:1311,34,0	./.
chr10	58814225	.	TCACACACA	T	9587.78	PASS	AB=1.000;AC=47;AF=0.940;AN=50;BaseQRankSum=-0.276;DP=509;FS=0.000;HRun=0;HaplotypeScore=219.8231;InbreedingCoeff=0.2662;MQ=57.65;MQ0=13;MQRankSum=-1.927;QD=21.64;ReadPosRankSum=2.075;VQSLOD=3.9794;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,4:12:25.49:277,25,0	1/1:4,7:11:22.89:434,23,0	./.	0/0:35,0:16:0.89:0,1,2	1/1:9,7:17:27.08:422,27,0	1/1:8,6:15:26.11:451,26,0	1/1:23,6:29:36.02:640,36,0	0/1:25,0:25:28.85:162,0,29	1/1:10,3:13:15.02:249,15,0	1/1:16,0:15:17.70:490,18,0	1/1:14,1:15:15.78:204,16,0	1/1:5,9:15:12.50:220,12,0	1/1:3,6:9:11.94:288,12,0	1/1:17,3:20:29.56:446,30,0	1/1:25,0:23:27.05:453,27,0	1/1:11,0:11:17.54:117,18,0	1/1:9,4:16:6.35:368,6,0	1/1:16,5:21:39.18:850,39,0	1/1:6,1:7:12.01:204,12,0	1/1:22,2:21:18.06:308,18,0	./.	1/1:17,6:22:24.65:419,25,0	1/1:6,14:18:21.07:434,21,0	1/1:21,5:25:15.04:273,15,0	1/1:27,2:29:36.08:542,36,0	1/1:17,0:17:39.02:724,39,0	1/1:17,2:19:33.11:613,33,0	./.
chr10	58814273	.	AAC	A	642.36	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=0.489;DP=650;FS=1.397;HRun=0;HaplotypeScore=285.8978;InbreedingCoeff=0.7257;MQ=35.54;MQ0=52;MQRankSum=-1.510;QD=4.94;ReadPosRankSum=0.144;VQSLOD=2.6906;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:17,5:20:11.53:90,12,0	1/1:6,5:11:17.65:124,18,0	0/0:82,0:9:16.92:0,17,179	0/0:73,0:8:5.75:0,6,56	1/1:13,6:18:11.29:73,11,0	0/0:15,0:15:17.94:0,18,236	0/0:25,0:24:36.12:0,36,585	1/1:19,3:22:13.24:132,13,0	1/1:7,7:13:26.86:208,27,0	0/0:28,0:27:25.52:0,26,167	0/0:23,0:23:5.31:0,5,35	0/0:15,1:16:11.87:0,12,193	0/0:11,0:10:5.93:0,6,58	0/0:22,0:22:14.13:0,14,70	0/1:24,0:22:2.17:3,0,2	0/0:10,0:10:9.34:0,9,23	1/1:11,7:18:23.88:187,24,0	0/0:7,0:18:33.02:0,33,307	0/0:15,0:14:22.97:0,23,136	0/0:26,0:23:1.90:0,2,18	0/0:13,0:12:4.84:0,5,44	0/0:19,0:18:24.08:0,24,388	0/0:18,0:17:15.05:0,15,243	0/0:19,0:18:12.04:0,12,193	0/0:29,0:29:0.16:0,0,53	0/0:29,0:28:37.09:0,37,191	0/0:25,0:25:21.79:0,22,84	0/0:4,0:3:3.38:0,3,8
chr10	58814288	.	ACGCGTGCGCGCG	A	17051.09	PASS	AB=1.000;AC=36;AF=0.643;AN=56;BaseQRankSum=10.106;DP=527;FS=31.907;HRun=0;HaplotypeScore=263.6939;InbreedingCoeff=0.7767;MQ=42.82;MQ0=7;MQRankSum=-9.190;QD=50.60;ReadPosRankSum=4.284;VQSLOD=2.7797;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:22:18.06:511,18,0	1/1:10,0:10:18.06:580,18,0	0/0:33,0:9:11.40:0,11,174	0/0:34,0:6:2.13:0,2,38	1/1:19,0:18:21.54:479,22,0	0/0:19,0:19:33.11:0,33,1656	0/0:26,0:25:42.14:0,42,2240	0/1:15,0:15:64.47:423,0,64	1/1:11,0:11:24.02:752,24,0	1/1:5,16:21:51.16:1616,51,0	1/1:10,13:23:30.10:1103,30,0	0/0:15,0:15:14.23:0,14,534	0/0:11,0:10:8.96:0,9,520	1/1:6,13:19:36.07:1256,36,0	1/1:9,15:22:30.10:1143,30,0	1/1:2,1:10:24.08:560,24,0	1/1:19,0:19:24.54:809,25,0	0/1:19,0:19:26.54:27,0,1279	1/1:8,3:12:26.74:610,27,0	1/1:13,6:17:21.07:740,21,0	1/1:1,10:10:12.04:417,12,0	0/0:16,0:15:24.07:0,24,1285	0/0:17,0:16:21.07:0,21,1268	0/0:17,0:16:20.70:0,21,1194	1/1:7,19:26:48.06:1736,48,0	1/1:8,18:26:63.20:2019,63,0	1/1:7,16:24:57.08:1923,57,0	1/1:1,3:3:9.03:347,9,0
chr10	58814292	.	GTGCGCGCGCA	G	10936.88	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=10.869;DP=439;FS=19.315;HRun=0;HaplotypeScore=231.4262;InbreedingCoeff=0.9392;MQ=44.11;MQ0=4;MQRankSum=-9.977;QD=39.92;ReadPosRankSum=4.239;VQSLOD=3.0716;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:6,18:22:18.06:511,18,0	1/1:3,5:8:18.06:523,18,0	0/0:22,0:7:13.53:0,14,157	0/0:23,0:3:2.98:0,3,22	1/1:7,11:17:21.05:467,21,0	0/0:16,0:16:33.05:0,33,1457	0/0:20,0:20:45.10:0,45,2072	1/1:6,5:11:26.52:532,27,0	1/1:2,8:10:24.08:719,24,0	1/1:18,0:18:44.83:812,45,0	1/1:19,0:19:30.03:586,30,0	0/0:14,0:14:21.04:0,21,874	0/0:10,0:9:9:0,9,467	1/1:13,0:13:33.11:649,33,0	1/1:20,0:20:30.10:615,30,0	1/1:8,0:8:24.03:582,24,0	1/1:2,18:20:29.93:853,30,0	0/0:17,0:17:15.37:0,15,1208	1/1:9,0:9:26.54:318,27,0	1/1:13,0:11:21.07:408,21,0	1/1:11,0:10:11.96:201,12,0	0/0:12,0:12:21.07:0,21,1059	0/0:15,0:15:24.08:0,24,1235	0/0:16,0:15:21.07:0,21,1067	1/1:24,0:24:47.97:924,48,0	1/1:23,0:23:62.92:1078,63,0	1/1:22,0:22:48.64:984,49,0	1/1:3,0:3:9.03:176,9,0
chr10	58814302	.	ACG	A	1937.88	PASS	AB=1.000;AC=34;AF=0.630;AN=54;BaseQRankSum=10.967;DP=396;FS=0.000;HRun=0;HaplotypeScore=206.2819;InbreedingCoeff=0.8055;MQ=51.77;MQ0=1;MQRankSum=-9.472;QD=7.72;ReadPosRankSum=5.225;VQSLOD=3.1274;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:19:0.34:39,0,0	1/1:8,0:8:13.10:65,13,0	0/1:9,0:5:0:0,0,0	./.	1/1:11,0:11:8.44:35,8,0	0/0:15,0:15:33.11:0,33,545	0/0:23,0:23:48.08:0,48,702	0/1:9,0:9:11.27:38,0,11	1/1:12,0:12:22.04:99,22,0	1/1:15,1:16:38.03:231,38,0	1/1:15,0:15:26.09:144,26,0	0/0:13,0:13:23.87:0,24,366	0/0:12,0:12:24.08:0,24,368	1/1:16,0:16:16.04:137,16,0	1/1:17,1:18:29.12:170,29,0	0/0:13,0:13:29.05:0,29,230	1/1:18,0:18:24.34:103,24,0	0/0:20,0:20:45.06:0,45,650	1/1:8,0:8:12.51:66,13,0	1/1:11,0:11:4.06:51,4,0	1/1:15,0:13:11.75:74,12,0	0/0:9,0:9:18.06:0,18,281	0/0:11,0:11:24.04:0,24,376	0/0:16,0:15:30.03:0,30,441	1/1:21,2:23:44.53:279,45,0	1/1:20,0:20:46.67:269,47,0	1/1:17,1:18:45.75:290,46,0	1/1:5,0:5:8.75:50,9,0
chr10	58814333	.	GGT	G	5013.70	PASS	AB=0.833;AC=25;AF=0.446;AN=56;BaseQRankSum=0.527;DP=645;FS=0.874;HRun=0;HaplotypeScore=206.8144;InbreedingCoeff=0.9159;MQ=60.15;MQ0=14;MQRankSum=-1.807;QD=17.35;ReadPosRankSum=0.220;VQSLOD=4.4639;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,1:29:14.11:0,14,644	0/1:4,1:5:21.61:22,0,162	0/0:51,0:18:20.90:0,21,319	0/0:46,0:20:41.27:0,41,477	0/0:13,0:13:18.06:0,18,281	0/0:3,0:21:50.99:0,51,449	0/0:4,0:24:42:0,42,393	0/0:25,0:25:63.21:0,63,1010	0/0:21,0:21:51.17:0,51,823	1/1:7,13:21:47.60:549,48,0	1/1:6,13:19:15.04:178,15,0	0/0:4,0:17:42.01:0,42,412	0/0:3,0:11:32.99:0,33,290	1/1:2,22:24:30.09:363,30,0	1/1:3,22:25:30.09:366,30,0	1/1:6,19:22:48.15:586,48,0	0/0:23,0:23:30.10:0,30,460	0/0:27,0:27:72.19:0,72,1115	1/1:12,10:22:30.03:324,30,0	1/1:5,8:12:11.93:146,12,0	1/1:9,41:48:72.22:879,72,0	0/0:3,0:14:23.70:0,24,211	0/0:7,0:12:28.28:0,28,303	0/0:5,0:20:45.01:0,45,441	1/1:3,28:31:39.12:477,39,0	1/1:10,13:23:42.60:503,43,0	1/1:8,13:21:30.09:366,30,0	1/1:2,8:10:21.07:257,21,0
chr10	58816668	.	G	GGACTCT	19627.69	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-9.739;DP=650;FS=3.695;HRun=0;HaplotypeScore=130.5159;InbreedingCoeff=0.9981;MQ=81.28;MQ0=0;MQRankSum=-19.095;QD=80.11;ReadPosRankSum=1.022;VQSLOD=5.8350;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,157,3414	0/0:9,0:9:27.09:0,27,612	0/0:26,0:26:66.15:0,66,1287	0/0:16,0:16:39.12:0,39,787	0/0:21,0:21:60.20:0,60,1326	0/0:23,0:23:63.19:0,63,1348	0/0:26,0:26:72.25:0,72,1620	0/0:28,0:28:72.24:0,72,1587	0/0:23,0:23:63.22:0,63,1385	1/1:9,13:22:57.67:1939,58,0	1/1:5,10:16:33.08:1127,33,0	0/0:22,0:22:63.22:0,63,1420	0/0:22,0:22:57.20:0,57,1281	1/1:6,17:26:57.20:1916,57,0	1/1:5,25:30:75.26:2570,75,0	1/1:5,13:20:45.15:1542,45,0	0/0:36,0:36:99:0,105,2304	0/0:24,0:24:66.17:0,66,1405	1/1:12,10:23:63.20:1787,63,0	1/1:8,15:25:45.15:1550,45,0	1/1:4,5:10:18.06:625,18,0	0/0:26,0:26:75.72:0,76,1634	0/0:21,0:21:63.22:0,63,1422	0/0:28,0:28:78.26:0,78,1732	1/1:5,17:23:54.19:1849,54,0	1/1:4,15:19:54.19:1818,54,0	1/1:5,18:23:63.22:2174,63,0	1/1:0,7:7:21.07:730,21,0
chr10	58817151	.	AGGG	A	7208.23	PASS	AB=0.895;AC=23;AF=0.411;AN=56;BaseQRankSum=19.233;DP=730;FS=4.871;HRun=7;HaplotypeScore=160.4893;InbreedingCoeff=0.9264;MQ=73.37;MQ0=2;MQRankSum=-4.361;QD=25.74;ReadPosRankSum=1.472;VQSLOD=1.7368;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,144,3062	0/0:14,0:14:36.12:0,36,805	0/0:30,0:25:63.21:0,63,1268	0/0:27,0:23:50.73:0,51,923	0/0:33,0:33:93.32:0,93,2046	0/0:29,0:29:84.28:0,84,1815	0/0:17,0:17:48.15:0,48,1030	0/0:37,0:37:99:0,105,2174	0/0:24,0:24:69.24:0,69,1520	1/1:33,1:34:83.65:1021,84,0	1/1:16,0:16:34.95:383,35,0	0/0:31,0:31:87.30:0,87,1940	0/0:35,0:35:99:0,105,2291	1/1:15,1:16:27.65:269,28,0	1/1:30,2:32:79.74:874,80,0	0/1:15,2:17:22.26:409,0,22	0/0:24,0:24:69.24:0,69,1527	0/0:17,0:17:48.15:0,48,1030	1/1:22,1:23:56.75:576,57,0	1/1:35,0:35:89.68:819,90,0	1/1:13,0:13:30.33:263,30,0	0/0:28,0:28:72.22:0,72,1524	0/0:28,0:28:84.29:0,84,1856	0/0:25,0:25:66.23:0,66,1403	1/1:25,1:26:59.06:699,59,0	1/1:30,0:30:83.59:861,84,0	1/1:24,2:26:64.52:636,65,0	1/1:9,3:12:35.97:397,36,0
chr10	58817155	.	G	GA	6260.81	PASS	AB=0.563;AC=23;AF=0.411;AN=56;BaseQRankSum=19.511;DP=713;FS=4.500;HRun=0;HaplotypeScore=133.5316;InbreedingCoeff=0.9208;MQ=73.50;MQ0=2;MQRankSum=-2.975;QD=23.63;ReadPosRankSum=4.595;VQSLOD=5.8010;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,153,2045	0/0:13,0:13:39.11:0,39,526	0/0:31,0:26:66.12:0,66,864	0/0:26,0:22:49.92:0,50,600	0/0:31,0:31:93.31:0,93,1296	0/0:28,0:28:84.26:0,84,1139	0/0:19,0:19:57.15:0,57,732	0/0:39,0:39:99:0,114,1470	0/0:23,0:23:69.22:0,69,939	1/1:5,24:29:48.41:741,48,0	1/1:4,11:15:13.73:344,14,0	0/0:29,0:29:87.29:0,87,1207	0/0:38,0:38:99:0,114,1497	1/1:1,14:15:30.08:340,30,0	1/1:3,27:30:53.15:817,53,0	0/1:4,3:18:18:119,0,18	0/0:27,0:27:78.20:0,78,1034	0/0:19,0:19:54.14:0,54,702	1/1:2,18:20:39.88:541,40,0	1/1:5,28:33:61.51:832,62,0	1/1:2,9:11:26.96:297,27,0	0/0:24,0:24:70.46:0,70,945	0/0:28,0:28:84.26:0,84,1137	0/0:22,0:22:66.20:0,66,887	1/1:5,19:24:21.10:564,21,0	1/1:5,25:30:72.74:785,73,0	1/1:5,23:28:40.26:598,40,0	1/1:3,9:12:14.21:282,14,0
chr10	58817691	.	A	ACCTCG	19768.47	PASS	AB=1.000;AC=25;AF=0.446;AN=56;BaseQRankSum=-12.192;DP=753;FS=3.389;HRun=0;HaplotypeScore=139.8626;InbreedingCoeff=0.9116;MQ=74.67;MQ0=0;MQRankSum=-8.973;QD=62.17;ReadPosRankSum=0.925;VQSLOD=5.4885;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,129,2790	0/1:20,0:20:31.70:32,0,1097	0/0:18,0:18:51.16:0,51,980	0/0:12,0:13:17.57:0,18,544	0/0:31,0:31:90.30:0,90,1869	0/0:33,0:33:99:0,99,2100	0/0:27,0:27:69.22:0,69,1425	0/0:34,0:34:99:0,99,2065	0/0:25,0:25:66.23:0,66,1399	1/1:3,20:25:72.10:1897,72,0	1/1:2,10:14:23.94:718,24,0	0/0:41,0:41:99:0,123,2606	0/0:34,0:34:99:0,102,2154	1/1:3,23:28:66.23:2074,66,0	1/1:5,21:30:66.23:2035,66,0	1/1:6,19:26:66.23:2055,66,0	0/0:42,0:42:99:0,120,2505	0/0:23,0:23:66.23:0,66,1418	1/1:8,13:22:60.11:1610,60,0	1/1:4,15:21:33.11:1020,33,0	1/1:13,25:42:60.20:1817,60,0	0/0:22,0:22:63.20:0,63,1327	0/0:19,0:19:54.18:0,54,1110	0/0:28,0:28:84.27:0,84,1777	1/1:2,22:24:54.19:1621,54,0	1/1:3,23:28:78.25:2334,78,0	1/1:10,21:36:75.26:2364,75,0	1/1:1,1:2:6.02:190,6,0
chr10	58817973	.	A	AAT	13628.08	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-17.762;DP=728;FS=1.611;HRun=0;HaplotypeScore=79.1344;InbreedingCoeff=0.9998;MQ=89.03;MQ0=2;MQRankSum=-2.758;QD=47.48;ReadPosRankSum=2.642;VQSLOD=6.1969;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:51:99:0,144,2043	0/0:13,0:13:36.11:0,36,499	0/0:26,0:26:72.23:0,72,993	0/0:30,0:30:59.10:0,59,918	0/0:26,0:26:75.25:0,75,1074	0/0:25,0:25:72.24:0,72,1032	0/0:32,0:32:90.30:0,90,1290	0/0:23,0:23:60.15:0,60,821	0/0:23,0:23:69.23:0,69,989	1/1:1,29:30:84.25:1480,84,0	1/1:0,14:14:42.14:769,42,0	0/0:35,0:35:99:0,102,1462	0/0:28,0:28:81.27:0,81,1154	1/1:0,25:26:69.24:1265,69,0	1/1:2,27:29:69.24:1265,69,0	1/1:0,23:22:63.22:1155,63,0	0/0:30,0:30:86.88:0,87,1243	0/0:17,0:17:51.17:0,51,731	1/1:1,18:19:54.17:948,54,0	1/1:1,21:22:51.17:935,51,0	1/1:2,39:41:99:1925,105,0	0/0:27,0:27:81.27:0,81,1155	0/0:21,0:21:60.19:0,60,833	0/0:33,0:33:99:0,99,1416	1/1:1,16:17:48.16:880,48,0	1/1:2,26:28:75.26:1375,75,0	1/1:0,26:26:63.22:1154,63,0	1/1:2,9:11:27.09:478,27,0
chr10	58818806	.	GCTCCC	G	11873.14	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=18.074;DP=680;FS=2.235;HRun=0;HaplotypeScore=180.5993;InbreedingCoeff=0.9959;MQ=75.12;MQ0=0;MQRankSum=-18.398;QD=44.97;ReadPosRankSum=0.783;VQSLOD=5.0822;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,108,3155	0/0:8,0:8:21.07:0,21,645	0/0:18,0:18:48.16:0,48,1434	0/0:25,0:25:33.13:0,33,1747	0/0:23,0:23:57.20:0,57,1750	0/0:22,0:22:63.22:0,63,1921	0/0:29,0:29:84.29:0,84,2534	0/0:33,0:33:93.32:0,93,2850	0/0:31,0:31:81.28:0,81,2488	1/1:3,20:23:60.19:1193,60,0	1/1:4,10:14:17.90:354,18,0	0/0:23,0:23:66.23:0,66,2029	0/0:28,0:28:78.27:0,78,2398	1/1:2,33:35:93.16:1863,93,0	1/1:5,21:26:48.16:984,48,0	1/1:1,15:16:42.14:869,42,0	0/0:47,0:47:99:0,135,4028	0/0:31,0:31:87.30:0,87,2654	1/1:8,18:26:54.18:1075,54,0	1/1:0,19:19:54.19:1100,54,0	1/1:6,22:28:36.10:736,36,0	0/0:17,0:17:48.16:0,48,1460	0/0:11,0:11:33.11:0,33,1011	0/0:31,0:31:87.30:0,87,2660	1/1:4,18:22:33.11:665,33,0	1/1:2,26:28:78.27:1615,78,0	1/1:1,18:19:54.19:1108,54,0	1/1:0,8:8:15.05:310,15,0
chr10	58820282	.	C	CTTGT	6321.38	PASS	AB=1.000;AC=40;AF=0.714;AN=56;BaseQRankSum=-3.031;DP=617;FS=43.830;HRun=0;HaplotypeScore=103.6968;InbreedingCoeff=0.3891;MQ=63.40;MQ0=18;MQRankSum=3.314;QD=12.69;ReadPosRankSum=-2.186;VQSLOD=1.6533;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:28:12.93:148,13,0	1/1:2,9:12:11.90:139,12,0	0/0:35,0:9:4.63:0,5,56	0/0:37,0:12:0.93:0,1,71	1/1:17,1:18:31.59:274,32,0	0/1:10,0:10:27.87:28,0,120	0/0:14,0:14:19.91:0,20,222	1/1:40,0:40:99:998,102,0	0/1:33,0:32:40.50:331,0,41	1/1:7,26:33:76.62:699,77,0	1/1:16,0:16:39.32:338,39,0	0/1:8,0:8:49.57:87,0,50	0/1:15,0:15:31.36:31,0,172	1/1:26,1:27:15.04:250,15,0	1/1:9,20:30:27.03:517,27,0	1/1:18,1:19:6.02:108,6,0	1/1:5,16:22:17:423,17,0	0/0:20,0:20:56.89:0,57,576	1/1:13,0:12:25.88:258,26,0	1/1:2,12:14:32.18:308,32,0	1/1:41,1:40:12.06:204,12,0	0/0:13,0:13:26.94:0,27,216	0/1:8,0:8:2.97:3,0,37	0/1:12,0:12:20.06:20,0,80	1/1:24,0:24:6.02:124,6,0	1/1:28,0:28:69.51:668,70,0	1/1:6,16:23:17.38:208,17,0	1/1:22,1:23:12:156,12,0
chr10	58820283	.	T	TTGTTTG	6041.58	PASS	AB=0.923;AC=39;AF=0.696;AN=56;BaseQRankSum=-2.291;DP=680;FS=25.326;HRun=0;HaplotypeScore=145.0628;InbreedingCoeff=0.1599;MQ=61.90;MQ0=20;MQRankSum=3.942;QD=10.54;ReadPosRankSum=-1.972;VQSLOD=2.2489;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:9,18:38:4.54:161,0,5	1/1:11,0:11:11.90:107,12,0	0/0:33,0:9:4.97:0,5,56	0/0:37,0:12:7.90:0,8,80	1/1:5,11:25:26.48:276,26,0	0/1:15,0:15:83.41:83,0,117	0/1:18,0:18:17.03:17,0,202	1/1:40,0:40:99:999,102,0	0/1:32,0:32:99:315,0,176	1/1:32,0:32:76.62:668,77,0	1/1:14,0:18:39.32:335,39,0	0/1:12,0:12:48.83:212,0,49	0/1:23,0:23:99:154,0,165	1/1:27,0:28:1.54:156,2,0	0/1:28,0:29:12.98:255,0,13	1/1:4,15:23:6.02:145,6,0	1/1:21,0:22:16.44:248,16,0	0/0:9,0:20:56.90:0,57,706	1/1:14,0:13:28.84:285,29,0	1/1:14,0:14:32.16:245,32,0	1/1:42,0:41:9.76:126,10,0	0/0:16,0:16:26.93:0,27,216	0/1:8,0:8:33.94:40,0,34	0/1:14,0:19:45.54:46,0,80	1/1:3,0:30:9.03:226,9,0	1/1:30,0:30:72.07:711,72,0	1/1:22,0:23:16.46:143,16,0	1/1:24,0:23:11.39:90,11,0
chr10	58820285	.	G	GTT	4747.33	PASS	AB=0.883;AC=28;AF=0.500;AN=56;BaseQRankSum=-3.918;DP=689;FS=104.625;HRun=2;HaplotypeScore=127.4886;InbreedingCoeff=0.3140;MQ=60.41;MQ0=20;MQRankSum=3.915;QD=9.75;ReadPosRankSum=3.306;VQSLOD=0.7688;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:38,0:38:27.02:63,0,27	1/1:8,0:8:8.94:76,9,0	0/0:32,0:8:4.98:0,5,56	0/0:36,0:11:7.76:0,8,81	1/1:22,0:22:0.77:186,1,0	0/0:15,0:15:22.27:0,22,159	0/0:18,0:18:32.34:0,32,245	1/1:40,0:40:98.93:973,99,0	1/1:33,0:32:54.80:480,55,0	1/1:36,0:36:46.62:580,47,0	1/1:18,0:18:17.63:276,18,0	0/0:12,0:12:20.34:0,20,138	0/0:22,0:22:22.89:0,23,239	0/1:9,20:29:30.29:198,0,30	0/1:27,2:29:92.12:258,0,92	0/1:23,0:23:21.14:30,0,21	0/1:21,1:22:18.51:213,0,19	0/0:21,0:21:57.20:0,57,440	1/1:16,0:15:13.94:204,14,0	1/1:17,0:17:10.86:196,11,0	0/1:18,27:44:66.65:85,0,67	0/0:17,0:17:29.88:0,30,236	0/0:7,0:7:8.35:0,8,54	0/0:21,0:20:5.05:0,5,85	1/1:30,0:30:7.83:77,8,0	0/1:31,0:31:27.22:591,0,27	0/1:23,1:24:7.17:112,0,7	1/1:4,21:24:6.62:147,7,0
chr10	58820845	.	GTT	G	9144.07	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=14.238;DP=581;FS=1.033;HRun=4;HaplotypeScore=79.4093;InbreedingCoeff=0.9669;MQ=84.05;MQ0=0;MQRankSum=-0.487;QD=41.19;ReadPosRankSum=3.899;VQSLOD=4.1099;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,157,2855	0/0:9,0:9:24.07:0,24,420	0/0:14,0:13:29.22:0,29,477	0/0:21,0:21:50.35:0,50,887	0/0:23,0:23:69.22:0,69,1261	0/0:24,0:24:72.25:0,72,1343	0/0:19,0:19:57.20:0,57,1068	0/0:24,0:24:69.23:0,69,1218	0/0:17,0:17:51.15:0,51,894	1/1:0,19:19:57.15:814,57,0	1/1:0,17:17:48.16:705,48,0	0/0:18,0:18:51.17:0,51,926	0/0:23,0:23:69.21:0,69,1232	1/1:0,13:13:39.13:574,39,0	1/1:0,11:11:33.11:486,33,0	1/1:1,19:20:0.99:739,1,0	0/0:31,0:31:93.31:0,93,1710	0/0:22,0:22:66.19:0,66,1201	1/1:1,19:20:57.18:820,57,0	1/1:2,25:27:75.25:1104,75,0	1/1:0,12:12:36.12:530,36,0	0/0:19,0:19:51.17:0,51,927	0/0:21,0:21:63.21:0,63,1146	0/0:21,0:21:63.21:0,63,1150	1/1:1,27:28:75.25:1104,75,0	1/1:1,24:25:72.24:1060,72,0	1/1:1,20:21:57.11:812,57,0	1/1:0,9:9:27.09:397,27,0
chr10	58821343	.	AT	A	11636.05	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=3.539;DP=622;FS=20.533;HRun=5;HaplotypeScore=97.9261;InbreedingCoeff=0.9899;MQ=79.37;MQ0=0;MQRankSum=-0.915;QD=29.24;ReadPosRankSum=1.522;VQSLOD=3.1540;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,42:44:99:1292,114,0	1/1:1,8:9:21.06:244,21,0	0/0:21,1:22:11.86:0,12,626	0/0:12,0:13:30.04:0,30,355	1/1:2,23:25:63.18:715,63,0	0/0:16,0:16:45.15:0,45,615	0/0:29,0:29:72.19:0,72,948	1/1:4,30:34:90.26:1020,90,0	1/1:0,20:20:54.15:612,54,0	1/1:3,29:32:87.25:987,87,0	1/1:1,17:18:48.14:544,48,0	0/0:22,0:22:63.21:0,63,854	0/0:22,0:22:57.19:0,57,772	1/1:2,14:16:42.09:465,42,0	1/1:0,16:16:45.13:510,45,0	1/1:0,18:18:54.15:612,54,0	1/1:2,24:26:72.20:816,72,0	0/0:28,0:28:66.12:0,66,843	1/1:3,15:18:42.08:462,42,0	1/1:2,15:17:42.12:476,42,0	1/1:4,34:38:81.18:907,81,0	0/0:20,0:20:57.13:0,57,733	0/0:24,0:24:72.24:0,72,982	0/0:28,0:28:66.17:0,66,861	1/1:0,21:21:54.15:613,54,0	1/1:0,26:26:75.21:851,75,0	1/1:0,11:11:33.09:374,33,0	1/1:4,4:8:12.03:136,12,0
chr10	58821393	.	GCACACA	G	3079.85	PASS	AB=0.760;AC=27;AF=0.482;AN=56;BaseQRankSum=-0.834;DP=661;FS=24.543;HRun=0;HaplotypeScore=241.9731;InbreedingCoeff=0.8005;MQ=56.92;MQ0=9;MQRankSum=-6.210;QD=10.00;ReadPosRankSum=-2.222;VQSLOD=1.1075;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:22,12:35:3.46:39,3,0	1/1:7,7:15:12.04:214,12,0	0/0:49,0:23:9.03:0,9,151	0/0:56,0:24:5.23:0,5,73	1/1:8,10:20:3.01:44,3,0	1/1:6,5:12:6.02:118,6,0	1/1:17,7:26:9.29:91,9,0	1/1:8,7:15:21.49:394,21,0	1/1:7,12:22:17.70:302,18,0	0/0:21,0:22:29.43:0,29,1130	0/0:14,0:14:23.24:0,23,674	1/1:15,12:29:23.74:336,24,0	1/1:9,13:24:41.29:595,41,0	0/0:16,0:17:30.10:0,30,892	0/0:14,0:14:21.07:0,21,647	0/0:16,0:20:29.74:0,30,854	1/1:9,8:18:24.03:423,24,0	0/1:13,5:19:7.21:286,0,7	0/0:12,0:12:24.05:0,24,525	0/0:19,0:20:27.09:0,27,822	0/0:47,0:54:48.14:0,48,1237	1/1:5,10:16:5.03:132,5,0	1/1:9,10:20:5.99:74,6,0	1/1:22,10:34:15.37:242,15,0	0/0:21,0:24:22.62:0,23,591	0/0:29,0:31:69.24:0,69,1949	0/0:11,0:13:24.03:0,24,557	0/0:4,0:4:12.04:0,12,330
chr10	58821432	.	TACAC	T	3665.12	PASS	AB=0.970;AC=34;AF=0.654;AN=52;BaseQRankSum=-3.800;DP=751;FS=16.399;HRun=0;HaplotypeScore=259.0185;InbreedingCoeff=0.2989;MQ=37.17;MQ0=35;MQRankSum=4.659;QD=6.83;ReadPosRankSum=2.110;VQSLOD=1.2844;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:33,0:32:4.19:18,4,0	./.	0/1:51,0:5:6.02:6,0,15	0/0:63,0:7:12.01:0,12,142	./.	0/1:19,0:19:1.47:11,0,1	0/0:39,0:39:3.03:0,3,82	0/0:33,0:31:11.20:0,11,160	0/0:24,0:24:4.74:0,5,44	1/1:17,4:20:26.49:560,26,0	1/1:10,5:14:12:166,12,0	0/1:40,0:39:27.21:27,0,41	0/1:34,0:34:61.60:62,0,166	1/1:10,7:17:14.14:197,14,0	1/1:11,5:15:15.01:198,15,0	1/1:11,5:16:21.36:277,21,0	0/1:18,0:18:3.15:3,0,130	0/1:27,0:28:42.73:43,0,161	0/1:13,3:15:14.45:309,0,14	1/1:11,8:19:15.05:220,15,0	1/1:55,7:60:35.54:422,36,0	0/1:24,0:24:2.98:3,0,31	0/0:26,0:26:6.68:0,7,119	1/1:40,0:40:16.74:52,17,0	1/1:12,8:20:18.32:267,18,0	1/1:22,6:25:40.51:663,41,0	1/1:7,7:14:9.69:130,10,0	1/1:5,0:4:5.36:32,5,0
chr10	58821444	.	CATACACACACACACACACACACACACAT	C	2663.25	PASS	AB=0.847;AC=9;AF=0.173;AN=52;BaseQRankSum=1.241;DP=739;FS=8.574;HRun=0;HaplotypeScore=412.3583;InbreedingCoeff=0.5339;MQ=38.34;MQ0=35;MQRankSum=-3.577;QD=18.37;ReadPosRankSum=-7.394;VQSLOD=-0.3397;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:28:12.95:135,13,0	./.	0/0:46,0:3:5.98:0,6,58	0/0:60,0:6:16.61:0,17,426	./.	0/0:21,0:21:34.75:0,35,2146	0/0:41,0:41:35.38:0,35,1953	0/1:5,29:31:25.61:1041,0,26	1/1:19,0:23:24.31:628,24,0	0/1:23,0:21:11.23:11,0,665	0/0:12,0:12:7.66:0,8,149	0/0:38,0:39:48.28:0,48,2316	0/0:33,0:33:53.25:0,53,2597	0/0:19,0:20:19.75:0,20,270	0/1:19,0:18:5.79:6,0,277	0/0:21,0:21:29.76:0,30,438	1/1:14,0:18:34.98:991,35,0	0/0:29,0:29:72.25:0,72,3455	0/0:19,0:17:47.77:0,48,838	0/0:17,0:17:16.43:0,16,417	0/0:56,0:54:24.76:0,25,365	0/0:20,0:21:19.82:0,20,1196	0/0:26,0:26:21.56:0,22,1050	0/0:44,0:44:39.80:0,40,3139	0/0:21,0:21:10.63:0,11,265	0/0:29,0:27:72.97:0,73,1456	0/0:14,0:14:17.21:0,17,323	0/0:1,0:1:3.01:0,3,74
chr10	58821446	.	TACAC	T	4677.32	PASS	AB=1.000;AC=30;AF=0.625;AN=48;BaseQRankSum=-4.885;DP=734;FS=5.971;HRun=0;HaplotypeScore=249.7628;InbreedingCoeff=0.3413;MQ=38.48;MQ0=34;MQRankSum=3.971;QD=9.08;ReadPosRankSum=3.146;VQSLOD=2.9816;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:27:3.30:16,3,0	./.	./.	0/0:56,0:6:7.26:0,7,71	./.	1/1:5,16:21:33.09:518,33,0	1/1:16,25:41:30.09:495,30,0	0/0:34,0:31:11.73:0,12,92	0/0:24,0:24:8.92:0,9,91	0/1:23,0:21:53.60:87,0,54	1/1:12,0:12:0.86:2,1,0	1/1:16,24:40:41.76:674,42,0	1/1:8,25:33:35.81:577,36,0	0/0:20,0:20:5.51:0,6,37	0/1:18,0:17:0.02:1,0,0	0/1:21,0:21:2.05:25,0,2	0/0:18,0:18:1.65:0,2,156	1/1:6,23:29:26.76:798,27,0	0/1:21,0:19:95.88:96,0,120	1/1:17,0:17:0.58:3,1,0	0/1:58,0:55:0:0,0,1	1/1:7,14:21:18.06:298,18,0	1/1:9,17:27:5.39:236,5,0	1/1:8,35:43:45.15:743,45,0	0/1:21,0:21:0.48:1,0,0	0/1:29,0:27:33.51:103,0,34	0/1:13,0:13:5.58:6,0,6	./.
chr10	58821457	.	A	AGG	470.81	PASS	AB=0.891;AC=10;AF=0.179;AN=56;BaseQRankSum=3.830;DP=681;FS=13.210;HRun=0;HaplotypeScore=242.9370;InbreedingCoeff=0.5096;MQ=39.32;MQ0=23;MQRankSum=-2.720;QD=3.77;ReadPosRankSum=-2.515;VQSLOD=1.1074;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:13,9:27:8.69:64,9,0	1/1:8,0:8:6.02:75,6,0	0/0:27,0:2:5.20:0,5,29	0/0:42,0:7:20.74:0,21,290	1/1:11,4:17:2.91:39,3,0	0/0:21,0:21:41.49:0,41,356	0/0:39,0:39:34.79:0,35,295	0/1:32,0:31:47.07:74,0,47	1/1:17,3:23:4.14:250,4,0	0/0:20,0:18:42.95:0,43,519	0/0:12,0:12:6.22:0,6,92	0/0:35,0:35:41.40:0,41,301	0/0:33,0:33:54.03:0,54,489	0/0:18,0:18:8.83:0,9,120	0/0:22,0:21:10.93:0,11,158	0/0:19,0:19:23.73:0,24,304	0/1:13,3:18:99:111,0,123	0/0:27,0:27:68.57:0,69,598	0/0:21,0:19:45.14:0,45,583	0/0:18,0:18:17.93:0,18,265	0/0:53,0:50:16.23:0,16,204	0/0:18,0:18:20.81:0,21,168	0/0:26,0:26:26.68:0,27,248	0/0:42,0:42:46.65:0,47,351	0/0:21,0:21:7.70:0,8,115	0/0:26,0:24:59.18:0,59,749	0/0:14,0:14:20.74:0,21,242	0/0:1,0:1:3.01:0,3,45
chr10	58821461	.	ACACACACACATGCACG	A	3606.85	PASS	AB=1.000;AC=24;AF=0.444;AN=54;BaseQRankSum=0.543;DP=657;FS=0.000;HRun=0;HaplotypeScore=295.4334;InbreedingCoeff=0.6173;MQ=40.04;MQ0=19;MQRankSum=-7.741;QD=12.14;ReadPosRankSum=-4.066;VQSLOD=1.0506;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:6.69:0,7,90	0/0:6,0:6:6.02:0,6,70	0/0:17,0:2:3.01:0,3,95	0/0:37,0:8:21.94:0,22,498	0/0:14,0:14:3:0,3,35	0/0:23,0:23:35.67:0,36,1618	0/0:39,0:39:38.58:0,39,1126	0/0:31,0:30:56.65:0,57,554	0/0:20,0:20:20.73:0,21,309	1/1:20,1:19:38.53:1009,39,0	1/1:11,0:11:3.43:21,3,0	0/0:33,0:33:31.82:0,32,1720	0/1:32,0:32:37.37:37,0,1039	1/1:20,0:20:9.66:187,10,0	1/1:19,3:21:3.94:76,4,0	1/1:17,2:19:21.11:414,21,0	0/1:17,0:17:98.48:98,0,267	0/0:28,0:28:29.68:0,30,1817	1/1:20,0:18:0.03:480,0,0	1/1:16,2:18:5.45:76,5,0	1/1:57,0:54:8.45:193,8,0	0/0:19,0:19:20.47:0,20,650	0/0:23,0:24:20.57:0,21,625	0/0:42,0:42:52.58:0,53,2103	1/1:18,2:20:4.21:15,4,0	1/1:25,1:24:51.08:723,51,0	1/1:13,1:14:7.18:278,7,0	./.
chr10	58821466	.	CACACAT	C	1644.63	PASS	AB=1.000;AC=29;AF=0.537;AN=54;BaseQRankSum=6.839;DP=634;FS=0.000;HRun=0;HaplotypeScore=234.6763;InbreedingCoeff=0.5089;MQ=40.99;MQ0=14;MQRankSum=-4.017;QD=4.67;ReadPosRankSum=-4.712;VQSLOD=1.4654;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:25:12.83:92,13,0	0/1:6,0:6:0.10:0,0,1	0/0:13,0:3:8.99:0,9,77	0/0:31,0:10:30.01:0,30,327	1/1:12,0:12:2.97:20,3,0	0/0:24,0:24:46.79:0,47,282	0/0:34,0:34:35.52:0,36,200	1/1:31,0:30:8.24:281,8,0	0/1:20,0:20:36.77:37,0,68	1/1:21,0:20:15.48:340,15,0	1/1:11,0:11:1.65:4,2,0	0/0:32,0:32:43.58:0,44,232	0/0:33,0:33:51.63:0,52,290	1/1:17,2:19:7.55:71,8,0	1/1:19,0:19:3.41:19,3,0	1/1:17,1:18:12.12:165,12,0	0/1:23,0:23:99:160,0,151	0/0:29,0:29:41.74:0,42,280	0/1:18,0:17:84.10:175,0,84	1/1:15,0:15:2.64:32,3,0	1/1:54,1:51:8.09:63,8,0	0/0:17,0:17:18.15:0,18,91	0/0:26,0:26:31.30:0,31,252	0/0:42,0:42:50.98:0,51,260	1/1:21,0:21:1.22:3,1,0	1/1:22,1:21:2.99:251,3,0	0/1:14,0:14:1.77:112,0,2	./.
chr10	58821468	.	CACAT	C	3934.30	PASS	AB=0.981;AC=39;AF=0.722;AN=54;BaseQRankSum=4.048;DP=614;FS=10.981;HRun=0;HaplotypeScore=210.0708;InbreedingCoeff=-0.0931;MQ=41.86;MQ0=12;MQRankSum=0.513;QD=6.93;ReadPosRankSum=5.368;VQSLOD=1.4822;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:25:12.12:90,12,0	1/1:6,0:6:1.19:5,1,0	0/0:16,0:5:14.94:0,15,125	0/0:29,0:11:32.99:0,33,312	1/1:11,0:11:2.97:20,3,0	0/1:24,0:24:97.19:233,0,97	0/1:32,0:32:47.99:212,0,48	1/1:31,0:30:15.50:289,15,0	0/1:19,0:19:21.47:66,0,21	1/1:19,2:20:23.04:305,23,0	1/1:9,3:12:5.89:40,6,0	0/1:33,0:33:67.44:307,0,67	0/1:33,0:33:99:258,0,104	1/1:12,5:18:8.92:63,9,0	1/1:16,2:18:2.94:18,3,0	1/1:15,2:17:19.47:111,19,0	0/1:23,0:23:65.68:171,0,66	0/1:29,0:29:35:401,0,35	0/1:11,4:14:23.46:262,0,23	1/1:8,6:14:2.60:10,3,0	1/1:49,5:50:11.16:84,11,0	0/1:16,0:16:4.02:127,0,4	0/1:24,0:24:98.67:99,0,115	0/1:40,0:40:38.98:339,0,39	1/1:13,5:18:0.22:2,0,0	1/1:15,7:21:30.49:346,30,0	1/1:9,4:13:7.09:75,7,0	./.
chr10	58821471	.	ATG	A	2028.94	PASS	AB=0.923;AC=26;AF=0.481;AN=54;BaseQRankSum=5.322;DP=598;FS=7.024;HRun=0;HaplotypeScore=203.8487;InbreedingCoeff=0.6062;MQ=45.25;MQ0=9;MQRankSum=-6.579;QD=6.79;ReadPosRankSum=-2.704;VQSLOD=1.9457;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:22:0.14:10,0,0	0/0:3,0:3:3.37:0,3,9	0/0:15,0:6:13.90:0,14,186	0/0:30,1:15:39.59:0,40,621	0/0:11,0:11:1.55:0,2,4	0/0:23,0:23:48.03:0,48,606	0/0:32,0:32:45.52:0,46,554	0/1:31,0:30:13.76:14,0,27	0/1:15,0:15:3.82:4,0,29	1/1:9,7:19:50.14:594,50,0	1/1:5,3:10:2.24:45,2,0	0/0:33,0:33:40.48:0,40,636	0/0:34,0:34:56.18:0,56,671	1/1:11,3:18:15.04:203,15,0	1/1:5,0:17:2.20:36,2,0	1/1:7,1:16:17.23:193,17,0	0/1:21,0:21:10.96:11,0,53	0/0:32,0:32:59.93:0,60,768	1/1:9,2:11:8.20:135,8,0	1/1:9,4:14:5.94:80,6,0	1/1:34,14:48:16.25:223,16,0	0/0:16,0:16:20.80:0,21,260	0/0:25,0:25:35.70:0,36,473	0/0:43,0:43:63.13:0,63,774	0/1:10,4:18:0.13:0,0,1	1/1:14,5:21:20.87:485,21,0	1/1:8,2:12:14.64:181,15,0	./.
chr10	58822887	.	G	GA	7399.95	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-7.880;DP=635;FS=3.203;HRun=6;HaplotypeScore=65.0429;InbreedingCoeff=0.9985;MQ=83.29;MQ0=0;MQRankSum=-1.717;QD=31.36;ReadPosRankSum=3.508;VQSLOD=5.4942;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,108,1084	0/0:10,0:10:26.09:0,26,251	0/0:25,0:23:57.12:0,57,577	0/0:20,0:19:46.86:0,47,448	0/0:26,0:26:72.15:0,72,728	0/0:26,0:26:75:0,75,730	0/0:32,0:32:93.07:0,93,899	0/0:35,0:35:87.13:0,87,857	0/0:24,0:24:69.16:0,69,703	1/1:1,22:23:63.20:793,63,0	1/1:2,15:17:42.09:510,42,0	0/0:26,0:26:66.12:0,66,658	0/0:20,0:20:54.12:0,54,550	1/1:0,16:16:39.12:492,39,0	1/1:1,25:26:69.22:870,69,0	1/1:2,17:19:17.58:537,18,0	0/0:37,0:37:99:0,108,1068	0/0:28,0:28:72.12:0,72,724	1/1:4,24:28:72.19:869,72,0	1/1:1,15:16:42.13:529,42,0	1/1:1,14:15:36.12:454,36,0	0/0:16,0:16:39.09:0,39,397	0/0:15,0:15:42.08:0,42,422	0/0:22,0:22:60.11:0,60,603	1/1:3,16:19:42.13:529,42,0	1/1:1,24:25:75.21:909,75,0	1/1:4,17:21:39.12:492,39,0	1/1:0,11:11:33.11:415,33,0
chr10	58823971	.	T	TGATA	34617.73	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-7.121;DP=633;FS=2.525;HRun=0;HaplotypeScore=81.3745;InbreedingCoeff=0.9485;MQ=76.99;MQ0=0;MQRankSum=-8.702;QD=57.60;ReadPosRankSum=5.269;VQSLOD=6.3772;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,43:47:99:2558,99,0	1/1:1,6:9:15.05:376,15,0	0/0:19,0:19:44.31:0,44,830	0/0:13,0:13:32.81:0,33,452	1/1:1,23:26:60.14:1534,60,0	1/1:2,27:29:66.23:1758,66,0	1/1:0,15:18:33.11:828,33,0	1/1:5,33:45:99:2483,120,0	1/1:2,17:20:39.13:1038,39,0	1/1:0,22:25:75.15:1717,75,0	1/1:0,27:29:75.12:1873,75,0	1/1:0,26:26:60.21:1575,60,0	1/1:0,22:23:54.19:1421,54,0	1/1:0,17:18:39.13:1038,39,0	1/1:1,21:23:54.19:1438,54,0	1/1:0,20:21:48.16:1278,48,0	1/1:1,16:22:45.15:1199,45,0	1/1:2,8:10:18.06:479,18,0	1/1:4,11:18:45.14:1093,45,0	1/1:1,28:34:84.29:2208,84,0	1/1:0,5:5:9.03:216,9,0	1/1:3,22:28:63.04:1536,63,0	1/1:1,10:15:24.08:639,24,0	1/1:1,10:12:21.07:559,21,0	1/1:4,19:24:45.15:1173,45,0	1/1:2,28:31:87.24:2203,87,0	1/1:2,31:36:75.26:1995,75,0	1/1:0,7:7:15.05:400,15,0
chr10	58826424	.	ATATGTGTGTGTGTG	A	2674.38	PASS	AB=1.000;AC=18;AF=0.321;AN=56;BaseQRankSum=1.387;DP=666;FS=3.147;HRun=0;HaplotypeScore=201.6035;InbreedingCoeff=0.6191;MQ=71.62;MQ0=30;MQRankSum=-0.411;QD=11.58;ReadPosRankSum=0.384;VQSLOD=2.6365;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:37:56.87:0,57,456	0/0:6,0:6:14.99:0,15,133	0/0:33,0:19:40.90:0,41,409	0/0:44,0:25:56.56:0,57,486	0/0:17,0:17:18.93:0,19,296	1/1:32,0:31:83.81:711,84,0	1/1:24,0:24:63.34:589,63,0	0/0:25,0:24:68.94:0,69,599	0/0:21,0:20:41.80:0,42,468	0/0:21,0:19:49.95:0,50,438	0/0:21,0:21:50.74:0,51,462	1/1:21,0:17:23.74:185,24,0	1/1:4,16:20:5.65:255,6,0	0/0:21,0:20:56.10:0,56,447	0/1:26,0:25:99:152,0,310	0/0:27,0:26:37.39:0,37,535	0/0:31,0:30:54.59:0,55,601	0/0:28,0:28:50.59:0,51,500	0/0:21,0:20:56.56:0,57,471	0/0:23,0:21:44.81:0,45,360	0/0:34,0:32:47.42:0,47,587	1/1:14,0:14:38.88:351,39,0	1/1:22,0:20:44.93:405,45,0	1/1:3,15:16:3.01:128,3,0	0/1:19,0:19:18.46:18,0,194	0/0:23,0:20:58.85:0,59,503	0/1:24,0:23:49.42:49,0,258	0/1:11,0:10:27.29:27,0,126
chr10	58826426	.	ATGTGTGTGTGTG	A	1209.31	PASS	AB=1.000;AC=29;AF=0.630;AN=46;BaseQRankSum=2.911;DP=667;FS=5.909;HRun=0;HaplotypeScore=183.1737;InbreedingCoeff=0.4068;MQ=68.87;MQ0=38;MQRankSum=0.682;QD=3.81;ReadPosRankSum=2.856;VQSLOD=2.4339;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	1/1:4,0:6:0.89:2,1,0	./.	./.	1/1:14,0:18:2.96:20,3,0	1/1:31,0:30:2.98:22,3,0	1/1:25,0:24:4.05:30,4,0	0/0:27,0:25:2.99:0,3,24	0/0:21,0:20:9.03:0,9,111	0/0:22,0:20:4.72:0,5,17	./.	0/0:20,0:16:0.47:0,0,1	1/1:19,0:19:5.73:172,6,0	1/1:20,0:19:5.98:60,6,0	1/1:19,6:24:17.23:434,17,0	0/0:15,0:25:13.80:0,14,180	0/0:24,0:30:1.69:0,2,52	1/1:21,0:30:4.63:63,5,0	0/0:22,0:20:0.89:0,1,2	./.	0/1:37,0:34:2.73:3,0,101	1/1:16,0:16:2.98:22,3,0	1/1:18,0:18:2.98:22,3,0	1/1:20,0:17:3.01:86,3,0	1/1:10,7:17:3.01:102,3,0	0/0:26,0:22:4.06:0,4,12	1/1:14,7:20:5.97:203,6,0	1/1:8,4:10:3.01:102,3,0
chr10	58827349	.	TTTTGG	T	5200.78	PASS	AB=0.972;AC=35;AF=0.700;AN=50;BaseQRankSum=10.077;DP=521;FS=1.259;HRun=0;HaplotypeScore=105.6267;InbreedingCoeff=0.8313;MQ=69.51;MQ0=4;MQRankSum=-2.991;QD=15.52;ReadPosRankSum=0.180;VQSLOD=4.4939;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:29.27:0,29,667	0/0:11,0:11:12.04:0,12,329	./.	./.	0/0:16,0:16:24.07:0,24,600	1/1:8,0:16:12.04:139,12,0	1/1:11,0:14:12.03:130,12,0	./.	0/0:15,0:15:24.08:0,24,659	1/1:11,8:19:21.07:359,21,0	1/1:8,7:15:24.08:413,24,0	1/1:9,0:15:9.03:105,9,0	1/1:9,0:19:27.08:314,27,0	1/1:9,9:18:24.08:423,24,0	1/1:8,9:18:24.08:405,24,0	0/0:14,0:14:15.05:0,15,394	0/1:34,1:35:7.74:8,0,1115	0/0:30,0:30:42.14:0,42,1084	1/1:14,4:17:12.04:212,12,0	1/1:17,7:24:21:306,21,0	1/1:14,10:24:21.07:370,21,0	1/1:4,0:13:18.05:205,18,0	1/1:12,0:17:11.93:121,12,0	0/0:10,0:12:0.47:0,0,1	1/1:13,8:21:18.06:317,18,0	1/1:10,6:16:24.08:423,24,0	1/1:11,14:25:39.13:687,39,0	1/1:3,5:8:15.05:264,15,0
chr10	58827820	.	GCA	G	2489.40	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=3.458;DP=352;FS=0.000;HRun=0;HaplotypeScore=95.6329;InbreedingCoeff=0.8760;MQ=55.23;MQ0=5;MQRankSum=-5.266;QD=19.45;ReadPosRankSum=-0.477;VQSLOD=3.6975;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:44.18:0,44,579	0/0:4,0:4:12.04:0,12,220	0/0:17,0:3:6.02:0,6,86	0/0:18,0:8:14.03:0,14,85	0/0:11,0:11:30.06:0,30,492	0/0:14,0:14:22.15:0,22,371	0/0:12,0:12:7.86:0,8,117	0/0:23,0:23:57.17:0,57,855	0/0:12,0:12:30.09:0,30,494	1/1:1,1:2:6.02:82,6,0	1/1:2,11:13:5.99:85,6,0	0/0:14,0:14:24.05:0,24,354	0/0:6,0:6:17.52:0,18,203	1/1:6,6:12:33.08:419,33,0	1/1:0,6:6:9.03:128,9,0	0/0:11,0:11:24.06:0,24,361	0/0:41,0:41:99:0,114,1754	1/1:9,10:18:34.29:442,34,0	1/1:6,4:10:27.06:342,27,0	1/1:8,3:11:21.01:253,21,0	1/1:8,5:12:2.84:42,3,0	0/0:4,0:4:9.02:0,9,126	0/0:6,0:6:11.31:0,11,190	0/0:14,0:14:17.88:0,18,263	1/1:2,5:7:8.82:124,9,0	1/1:2,6:8:18.06:240,18,0	1/1:7,6:13:32.89:348,33,0	1/1:9,5:14:15.05:198,15,0
chr10	58827828	.	GCA	G	429.05	PASS	AB=0.986;AC=30;AF=0.536;AN=56;BaseQRankSum=6.648;DP=357;FS=2.330;HRun=0;HaplotypeScore=105.9482;InbreedingCoeff=0.2108;MQ=45.78;MQ0=13;MQRankSum=-5.182;QD=1.88;ReadPosRankSum=1.930;VQSLOD=2.0547;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:15,3:17:99:106,0,260	0/0:6,0:6:18.02:0,18,250	0/0:23,0:2:2.98:0,3,22	0/0:25,0:5:5.05:0,5,44	0/0:11,0:11:21.04:0,21,275	1/1:16,0:16:0.71:57,1,0	0/1:14,0:14:5.50:5,0,10	0/1:23,0:23:1.53:2,0,162	0/0:11,0:11:24.06:0,24,342	1/1:2,0:2:2.74:12,3,0	1/1:11,0:11:5.25:21,5,0	0/1:14,0:14:0.46:0,0,84	0/1:5,0:5:21.37:21,0,32	1/1:12,0:12:9.68:36,10,0	1/1:7,0:7:7.77:33,8,0	0/1:11,0:11:1.32:32,0,1	0/0:38,1:38:14.52:0,15,1031	0/1:20,0:19:3.67:66,0,4	0/1:13,0:11:28.58:29,0,40	1/1:8,0:8:1.55:4,2,0	1/1:12,0:11:2.67:14,3,0	0/1:3,0:3:1.39:1,0,7	0/0:6,0:6:1.30:0,1,4	0/1:14,0:14:3.14:4,0,3	1/1:8,0:8:4.82:30,5,0	1/1:6,0:6:2.74:12,3,0	1/1:11,0:11:14.99:98,15,0	0/0:8,0:8:2.36:0,2,15
chr10	58827847	.	CA	C	732.01	PASS	AB=0.842;AC=26;AF=0.464;AN=56;BaseQRankSum=9.363;DP=371;FS=0.000;HRun=1;HaplotypeScore=101.0295;InbreedingCoeff=0.3623;MQ=50.29;MQ0=20;MQRankSum=-7.134;QD=5.34;ReadPosRankSum=-1.536;VQSLOD=-0.3183;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:16:32.93:0,33,427	0/0:8,0:8:24.08:0,24,362	0/0:48,0:9:6.96:0,7,244	0/0:50,0:12:12.03:0,12,290	0/0:13,0:13:27.09:0,27,411	0/0:12,1:13:2.67:0,3,98	0/1:13,1:14:2.10:2,0,43	0/0:16,0:16:45.01:0,45,616	0/0:12,0:11:30.10:0,30,459	1/1:4,0:4:3.36:48,3,0	1/1:5,1:7:5.18:27,5,0	0/1:14,0:14:10.92:11,0,147	0/1:3,2:5:28.81:29,0,39	1/1:7,1:8:17.19:129,17,0	1/1:7,1:8:8.62:49,9,0	0/1:7,1:8:25.18:25,0,97	0/0:38,0:38:99:0,100,1466	0/1:5,11:15:76.86:154,0,77	0/1:11,1:10:57.39:57,0,103	1/1:2,2:4:5.48:23,5,0	1/1:9,1:9:2.90:16,3,0	0/0:3,0:3:4.48:0,4,21	0/0:4,0:4:1.92:0,2,11	0/0:11,0:11:7.66:0,8,33	1/1:5,1:6:5.92:58,6,0	1/1:2,0:2:2.18:15,2,0	1/1:6,3:10:13.40:176,13,0	1/1:7,2:9:11.93:92,12,0
chr10	58827848	.	A	AC	1035.58	PASS	AB=0.883;AC=37;AF=0.661;AN=56;BaseQRankSum=10.009;DP=369;FS=1.848;HRun=1;HaplotypeScore=99.3134;InbreedingCoeff=0.5544;MQ=50.51;MQ0=19;MQRankSum=-6.563;QD=6.28;ReadPosRankSum=-0.088;VQSLOD=0.5258;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:16:38.62:0,39,409	0/0:8,0:8:24.08:0,24,309	0/0:50,0:9:9.30:0,9,242	0/0:50,0:13:22.13:0,22,303	0/0:13,0:13:27.07:0,27,332	1/1:9,4:13:16.16:115,16,0	1/1:6,7:13:11.41:69,11,0	0/0:16,0:16:45.13:0,45,551	0/0:12,0:11:30.10:0,30,383	1/1:4,0:4:5.79:48,6,0	1/1:4,3:7:0.57:7,1,0	1/1:5,8:13:21.58:162,22,0	1/1:3,2:5:10.03:70,10,0	1/1:2,6:8:16.46:90,16,0	1/1:4,4:8:8.17:37,8,0	0/1:5,3:8:15.87:93,0,16	0/0:37,0:36:99:0,99,1239	0/1:16,0:15:81.83:82,0,88	0/1:11,1:10:44.22:44,0,70	1/1:3,1:4:5.02:19,5,0	1/1:6,3:9:2.74:12,3,0	1/1:2,1:3:5.04:32,5,0	1/1:1,3:4:3.01:33,3,0	1/1:9,3:12:8.04:80,8,0	1/1:1,5:6:5.18:23,5,0	1/1:2,0:2:5.50:39,6,0	1/1:5,5:10:7.77:58,8,0	1/1:2,6:8:17.60:115,18,0
chr10	58827849	.	CACA	C	2842.97	PASS	AB=0.900;AC=38;AF=0.679;AN=56;BaseQRankSum=10.383;DP=367;FS=3.164;HRun=0;HaplotypeScore=97.2859;InbreedingCoeff=0.6455;MQ=50.65;MQ0=19;MQRankSum=-8.199;QD=17.66;ReadPosRankSum=-1.395;VQSLOD=2.9655;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:16:38.75:0,39,627	0/0:8,0:8:24.08:0,24,508	0/0:50,0:9:23.57:0,24,294	0/0:51,0:13:8.28:0,8,349	0/0:13,0:13:30.09:0,30,594	1/1:12,1:13:26.89:330,27,0	1/1:11,2:13:11.88:113,12,0	0/0:16,0:16:45.13:0,45,753	0/0:12,0:11:30.10:0,30,656	1/1:3,1:4:3.94:121,4,0	1/1:4,2:6:5.92:54,6,0	1/1:11,2:13:7.24:229,7,0	1/1:5,0:5:9.55:87,10,0	1/1:7,1:8:23.52:227,24,0	1/1:6,2:8:17.97:220,18,0	0/1:6,2:8:23.01:251,0,23	0/0:38,0:37:99:0,105,2158	0/1:16,0:15:41.43:277,0,41	1/1:8,4:10:18.91:256,19,0	1/1:3,1:4:5.38:43,5,0	1/1:6,2:8:2.84:53,3,0	1/1:3,0:3:6:72,6,0	1/1:4,0:4:4.78:35,5,0	1/1:8,1:11:8.53:117,9,0	1/1:6,0:6:8.96:102,9,0	1/1:0,1:1:3.01:51,3,0	1/1:9,1:10:17.49:202,17,0	1/1:8,0:8:23.38:201,23,0
chr10	58827851	.	CA	C	1913.89	PASS	AB=0.705;AC=37;AF=0.661;AN=56;BaseQRankSum=11.089;DP=370;FS=0.514;HRun=1;HaplotypeScore=92.0649;InbreedingCoeff=0.6052;MQ=50.58;MQ0=20;MQRankSum=-8.662;QD=11.89;ReadPosRankSum=-1.244;VQSLOD=1.5246;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:15:29.65:0,30,386	0/0:8,0:8:24.08:0,24,359	0/0:50,1:9:24.45:0,24,270	0/0:53,0:13:18.93:0,19,372	0/0:11,1:12:27.09:0,27,405	1/1:6,7:13:26.86:236,27,0	1/1:4,9:13:13.58:72,14,0	0/0:16,0:16:44.98:0,45,585	0/0:13,0:12:30.10:0,30,454	1/1:2,1:3:5.11:63,5,0	1/1:2,4:6:5.75:34,6,0	1/1:5,8:13:15.16:149,15,0	1/1:1,4:5:10.89:67,11,0	1/1:1,7:8:22.32:163,22,0	1/1:3,5:8:17.89:147,18,0	0/1:4,4:8:12.71:93,0,13	0/0:40,0:39:99:0,108,1548	0/1:5,11:15:32.01:230,0,32	0/1:10,2:10:21.87:110,0,22	1/1:1,3:4:5.75:46,6,0	1/1:4,4:8:2.99:25,3,0	1/1:2,1:3:5.79:36,6,0	1/1:1,3:4:4.78:34,5,0	1/1:8,3:11:7.31:48,7,0	1/1:1,6:7:9:99,9,0	1/1:1,0:1:2.98:22,3,0	1/1:1,9:10:21.45:225,21,0	1/1:0,8:8:23.79:216,24,0
chr10	58827883	.	C	CTAAG	5035.48	PASS	AB=0.775;AC=37;AF=0.661;AN=56;BaseQRankSum=6.697;DP=354;FS=0.480;HRun=0;HaplotypeScore=103.4352;InbreedingCoeff=0.4514;MQ=59.60;MQ0=4;MQRankSum=-6.198;QD=22.68;ReadPosRankSum=-0.243;VQSLOD=4.3372;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:5,0:15:70.91:162,0,71	0/0:7,0:7:18.02:0,18,244	0/0:27,0:16:23.51:0,24,237	0/0:23,0:11:5.60:0,6,125	0/1:6,0:13:68.96:201,0,69	0/1:10,0:25:56.22:103,0,56	0/1:6,0:8:4.83:56,0,5	0/0:19,0:19:54.09:0,54,689	0/0:8,0:8:23.97:0,24,258	1/1:0,10:10:17.87:243,18,0	1/1:7,0:7:11.65:75,12,0	1/1:7,0:11:0.74:101,1,0	1/1:3,0:5:2.55:48,3,0	1/1:4,3:7:17.80:264,18,0	1/1:5,1:6:17.54:163,18,0	0/0:1,0:4:5.95:0,6,54	0/0:38,0:37:99:0,102,1500	0/1:8,12:19:33.19:974,0,33	1/1:1,15:17:50.83:852,51,0	1/1:2,1:3:5.91:96,6,0	1/1:3,0:3:2.77:17,3,0	1/1:8,0:8:17.87:136,18,0	1/1:8,0:11:14.70:121,15,0	1/1:5,0:5:2.74:13,3,0	1/1:5,7:12:17.80:233,18,0	1/1:3,6:9:14.96:283,15,0	1/1:10,3:13:32.38:390,32,0	1/1:8,5:14:35.71:505,36,0
chr10	58829158	.	A	AGGAG	894.10	PASS	AB=1.000;AC=15;AF=0.278;AN=54;BaseQRankSum=5.042;DP=396;FS=7.811;HRun=0;HaplotypeScore=78.6205;InbreedingCoeff=0.7112;MQ=74.48;MQ0=1;MQRankSum=-1.504;QD=10.52;ReadPosRankSum=-0.371;VQSLOD=1.4474;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:42.12:0,42,653	0/0:7,0:7:18.02:0,18,251	0/0:19,0:15:18.15:0,18,168	0/1:24,0:21:19:19,0,109	0/0:21,0:21:33.09:0,33,526	./.	1/1:8,5:15:6.02:147,6,0	0/0:29,0:29:20.16:0,20,330	0/0:12,0:12:30.10:0,30,503	0/0:14,0:14:21.05:0,21,303	0/0:10,0:10:24.06:0,24,376	1/1:4,11:16:21.07:498,21,0	1/1:1,3:5:3.01:75,3,0	0/0:27,0:27:63.21:0,63,1042	0/0:19,0:19:39.11:0,39,608	0/0:17,0:17:45.14:0,45,733	0/0:12,0:12:12.02:0,12,176	1/1:2,1:3:3.01:75,3,0	0/0:12,0:12:15.03:0,15,199	0/0:12,0:12:14.18:0,14,251	0/0:20,0:20:42.14:0,42,700	1/1:5,0:5:9.01:94,9,0	1/1:5,1:7:4.26:77,4,0	1/1:6,2:9:3.01:75,3,0	0/0:14,0:14:35.80:0,36,455	0/0:17,0:17:24.06:0,24,336	0/0:14,0:14:39.11:0,39,606	0/0:3,0:3:6.02:0,6,97
chr10	58829768	.	G	GAGAG	2134.60	PASS	AB=0.965;AC=42;AF=0.778;AN=54;BaseQRankSum=0.365;DP=784;FS=4.252;HRun=0;HaplotypeScore=153.6275;InbreedingCoeff=0.3026;MQ=64.09;MQ0=14;MQRankSum=-3.694;QD=3.20;ReadPosRankSum=-3.247;VQSLOD=1.3484;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:44,0:44:2.36:2,0,412	1/1:4,0:4:2.60:10,3,0	1/1:47,0:23:5.24:28,5,0	0/0:69,0:25:0.16:0,0,1	0/0:19,0:19:12.04:0,12,186	0/1:21,0:20:0:0,0,0	1/1:40,0:38:5.61:63,6,0	1/1:28,0:28:2.70:7,3,0	0/0:20,0:20:33.07:0,33,416	1/1:33,0:31:16.50:131,17,0	./.	1/1:35,0:35:15.04:204,15,0	1/1:28,0:26:7.38:122,7,0	1/1:32,0:32:14.79:221,15,0	1/1:34,0:34:11.77:168,12,0	1/1:26,0:26:8.84:157,9,0	0/1:25,0:25:22.86:23,0,165	0/1:30,0:29:10.42:10,0,302	1/1:24,0:24:20.61:225,21,0	0/1:14,5:19:0:0,0,0	0/1:24,0:22:16.96:41,0,17	1/1:30,0:30:2.98:48,3,0	1/1:28,0:28:3.01:45,3,0	1/1:16,0:16:2.41:46,2,0	1/1:27,0:27:8.55:161,9,0	1/1:22,0:22:18.66:254,19,0	1/1:32,0:30:15.02:260,15,0	1/1:18,0:18:8.89:49,9,0
chr10	58831026	.	T	TACAC	2799.48	PASS	AC=44;AF=0.917;AN=48;BaseQRankSum=-3.489;DP=576;FS=0.000;HRun=0;HaplotypeScore=126.8327;InbreedingCoeff=0.3511;MQ=48.07;MQ0=24;MQRankSum=2.800;QD=6.53;ReadPosRankSum=-1.852;VQSLOD=2.2151;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:34,0:34:15.01:176,15,0	1/1:6,0:6:6.01:94,6,0	./.	./.	1/1:18,0:17:6:91,6,0	1/1:16,0:15:15:173,15,0	1/1:24,2:27:0.47:1,0,0	./.	./.	1/1:16,0:16:6.96:93,7,0	1/1:11,0:11:6.02:94,6,0	1/1:14,0:14:2.95:23,3,0	1/1:15,5:23:3:69,3,0	1/1:23,0:22:21:348,21,0	1/1:18,0:17:15.05:300,15,0	0/0:6,0:16:12.01:0,12,112	1/1:21,5:28:3.01:70,3,0	0/0:14,0:18:2.81:0,3,27	1/1:16,0:16:9.03:177,9,0	1/1:17,0:16:2.98:49,3,0	1/1:24,0:20:21.03:291,21,0	1/1:27,0:26:8.51:124,9,0	1/1:14,0:14:2.92:20,3,0	1/1:22,8:34:2.88:70,3,0	1/1:18,0:17:9.01:132,9,0	1/1:20,0:17:27.23:358,27,0	1/1:11,0:9:3.48:48,3,0	1/1:11,0:10:7.74:107,8,0
chr10	58831322	.	AC	A	4738	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=9.713;DP=621;FS=3.535;HRun=6;HaplotypeScore=64.6780;InbreedingCoeff=0.9988;MQ=79.64;MQ0=0;MQRankSum=-0.436;QD=27.23;ReadPosRankSum=1.984;VQSLOD=5.4969;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:38:99:0,111,1385	0/0:11,0:11:30.10:0,30,393	0/0:20,0:20:44.50:0,45,530	0/0:20,0:20:45.11:0,45,566	0/0:24,0:23:63.20:0,63,827	1/1:1,19:20:54.14:580,54,0	1/1:2,26:28:72.18:774,72,0	0/0:36,0:36:99:0,99,1286	0/0:19,0:19:51.16:0,51,657	0/0:21,0:21:63.20:0,63,812	0/0:8,0:8:21.06:0,21,266	1/1:0,28:28:78.20:838,78,0	1/1:2,24:26:63.16:677,63,0	0/0:16,0:16:48.15:0,48,618	0/0:39,0:39:99:0,114,1500	0/0:20,0:20:60.18:0,60,774	0/0:25,0:25:60.20:0,60,789	1/1:0,16:16:48.12:516,48,0	0/0:21,0:21:54.17:0,54,706	0/0:19,0:19:54.18:0,54,710	0/0:37,0:37:96.30:0,96,1246	1/1:1,16:16:39.10:418,39,0	1/1:2,8:10:24.06:258,24,0	1/1:6,23:29:63.15:677,63,0	0/0:24,0:24:66.20:0,66,849	0/0:20,0:19:57.17:0,57,732	0/0:12,0:12:33.10:0,33,420	0/0:16,0:16:48.16:0,48,627
chr10	58834924	.	GA	G	2229.86	PASS	AB=0.876;AC=18;AF=0.321;AN=56;BaseQRankSum=10.249;DP=579;FS=0.394;HRun=11;HaplotypeScore=75.7252;InbreedingCoeff=0.4265;MQ=55.18;MQ0=17;MQRankSum=-3.029;QD=8.64;ReadPosRankSum=2.622;VQSLOD=2.5137;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:40:99:0,100,1018	0/0:10,0:10:24.04:0,24,242	0/1:18,1:4:3.81:4,0,24	0/1:20,0:6:4.54:17,0,5	0/0:27,1:28:35.30:0,35,551	1/1:8,5:13:3.87:230,4,0	0/1:18,4:22:9.99:250,0,10	0/0:15,0:16:41.96:0,42,421	0/1:8,1:9:6.83:7,0,97	0/0:24,0:22:51.11:0,51,525	0/0:10,0:10:14.11:0,14,198	1/1:14,4:18:44.86:358,45,0	1/1:9,7:16:29.91:244,30,0	0/0:20,0:20:47.95:0,48,470	0/0:16,1:17:8.36:0,8,268	0/0:19,0:19:45.11:0,45,480	0/0:31,1:30:56.79:0,57,787	1/1:22,9:30:59.86:487,60,0	0/1:15,3:19:11.46:11,0,302	0/0:22,0:22:53.78:0,54,537	0/1:16,3:19:4.21:4,0,356	0/1:15,9:24:0.81:269,0,1	1/1:13,6:18:23.02:191,23,0	0/1:21,4:24:37.98:337,0,38	0/0:22,0:22:45.05:0,45,454	0/0:26,0:27:62.83:0,63,635	0/0:15,1:16:14.51:0,15,352	0/0:14,1:17:8.06:0,8,242
chr10	58834944	.	C	CA	4202.42	PASS	AB=1.000;AC=18;AF=0.321;AN=56;BaseQRankSum=5.708;DP=653;FS=3.044;HRun=10;HaplotypeScore=81.0378;InbreedingCoeff=0.8346;MQ=63.05;MQ0=12;MQRankSum=-3.792;QD=17.88;ReadPosRankSum=0.403;VQSLOD=4.2443;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:46:99:0,103,812	0/0:13,0:13:35.94:0,36,292	0/1:25,0:12:20.83:21,0,71	0/1:30,0:16:22.13:107,0,22	0/0:29,1:30:40.96:0,41,521	1/1:9,5:15:35.89:351,36,0	1/1:14,5:19:17.42:378,17,0	0/0:23,1:24:27.92:0,28,436	0/0:14,0:13:32.96:0,33,270	0/0:24,0:24:59.92:0,60,491	0/0:16,0:17:47.29:0,47,371	1/1:14,11:25:44.03:650,44,0	1/1:12,7:19:45.11:478,45,0	0/0:22,0:22:56.93:0,57,467	0/0:15,0:16:34.97:0,35,277	0/0:20,0:20:50.91:0,51,413	0/0:33,0:32:45.23:0,45,563	1/1:20,7:26:51.13:543,51,0	0/0:27,0:26:31.17:0,31,460	0/0:30,2:32:36.89:0,37,508	0/0:17,0:17:35.90:0,36,293	1/1:13,14:28:50.04:684,50,0	1/1:8,8:17:39.02:382,39,0	1/1:20,8:27:19.84:609,20,0	0/0:20,0:20:55.98:0,56,449	0/0:34,0:34:89.29:0,89,736	0/0:13,0:13:32.90:0,33,265	0/0:15,0:15:35.94:0,36,295
chr10	58836154	.	G	GT	238.10	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=-3.054;DP=487;FS=8.611;HRun=9;HaplotypeScore=47.2172;InbreedingCoeff=0.6620;MQ=74.79;MQ0=0;MQRankSum=0.939;QD=11.91;ReadPosRankSum=0.312;VQSLOD=1.9237;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:56.95:0,57,486	0/0:6,0:6:8.99:0,9,78	0/1:10,0:10:2.83:3,0,130	0/0:10,0:10:17.95:0,18,147	0/0:21,0:21:62.99:0,63,547	0/0:22,0:22:65.95:0,66,565	0/0:12,0:12:32.98:0,33,282	0/0:41,0:41:83.94:0,84,726	0/0:11,0:11:26.99:0,27,234	0/0:25,0:25:68.97:0,69,596	0/0:13,0:13:32.99:0,33,286	0/0:21,0:21:56.92:0,57,485	0/0:18,0:18:47.97:0,48,413	0/0:11,0:11:32.99:0,33,284	0/0:17,0:17:41.98:0,42,364	1/1:0,10:10:30.08:332,30,0	0/0:27,0:28:73.90:0,74,606	0/0:27,0:27:62.98:0,63,547	0/0:22,0:22:44.97:0,45,391	0/0:21,0:21:53.97:0,54,464	0/0:4,0:4:9:0,9,78	0/0:10,0:11:29.03:0,29,240	0/0:17,0:17:47.99:0,48,417	0/0:5,0:6:14.03:0,14,110	0/0:22,0:22:62.99:0,63,547	0/0:21,0:21:53.98:0,54,468	0/0:24,0:24:56.96:0,57,495	0/0:17,0:17:35.95:0,36,307
chr10	58836649	.	A	AT	8621.96	PASS	AB=0.844;AC=40;AF=0.714;AN=56;BaseQRankSum=-11.810;DP=546;FS=0.000;HRun=9;HaplotypeScore=56.5698;InbreedingCoeff=0.8195;MQ=74.70;MQ0=4;MQRankSum=-0.452;QD=22.81;ReadPosRankSum=3.014;VQSLOD=5.5457;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:56.97:0,57,495	0/0:6,0:6:15:0,15,130	0/0:41,0:23:24:0,24,237	0/1:38,0:21:11.89:12,0,80	0/0:18,0:18:44.97:0,45,387	1/1:0,11:11:27.07:299,27,0	1/1:2,18:20:13.19:372,13,0	0/0:24,0:24:56.97:0,57,490	0/0:20,0:20:53.99:0,54,469	1/1:2,14:16:42.10:456,42,0	1/1:1,14:15:16.02:391,16,0	1/1:2,17:20:48.12:525,48,0	1/1:0,16:16:39.11:431,39,0	1/1:2,21:23:54.15:597,54,0	1/1:2,15:17:39.11:431,39,0	1/1:2,0:13:25.57:128,26,0	0/0:35,0:35:90.85:0,91,780	1/1:2,17:19:45.12:498,45,0	1/1:5,13:18:19.05:425,19,0	1/1:1,15:17:48.13:528,48,0	1/1:2,19:21:51.14:564,51,0	0/1:6,5:11:30.92:145,0,31	1/1:3,9:12:24.06:266,24,0	1/1:2,26:28:72.19:797,72,0	1/1:1,10:11:21.06:232,21,0	1/1:1,17:18:51.14:564,51,0	1/1:0,17:17:48.13:531,48,0	1/1:1,13:14:39.11:431,39,0
chr10	58836801	.	TA	T	2345.10	PASS	AB=0.923;AC=15;AF=0.268;AN=56;BaseQRankSum=10.102;DP=426;FS=4.854;HRun=7;HaplotypeScore=45.8933;InbreedingCoeff=0.9168;MQ=80.36;MQ0=0;MQRankSum=-0.471;QD=20.57;ReadPosRankSum=2.580;VQSLOD=3.0445;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:81.25:0,81,1006	0/0:3,0:3:9.03:0,9,110	0/0:14,0:14:18.08:0,18,250	0/1:11,1:12:5.20:5,0,220	0/0:22,0:22:63.20:0,63,792	1/1:0,19:19:45.10:459,45,0	1/1:0,17:17:45.10:459,45,0	0/0:20,0:20:51.16:0,51,630	0/0:11,0:11:24.08:0,24,302	0/0:21,0:21:57.17:0,57,695	0/0:12,0:12:36.12:0,36,453	1/1:2,12:14:33.07:337,33,0	1/1:2,15:17:36.08:367,36,0	0/0:21,0:21:63.20:0,63,793	0/0:16,0:16:42.11:0,42,502	0/0:10,0:10:30.10:0,30,377	0/0:14,0:14:42.13:0,42,528	0/0:14,0:14:39.07:0,39,459	0/0:16,0:16:36.12:0,36,453	0/0:10,0:10:24.08:0,24,302	0/0:12,0:12:33.11:0,33,415	1/1:0,9:9:27.06:275,27,0	1/1:1,13:14:35.38:366,35,0	1/1:0,12:12:27.06:275,27,0	0/0:11,0:11:33.08:0,33,400	0/0:19,0:19:54.17:0,54,679	0/0:24,0:23:69.17:0,69,816	0/0:14,0:14:42.13:0,42,528
chr10	58837321	.	A	AACC	715.05	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-2.267;DP=718;FS=2.440;HRun=0;HaplotypeScore=97.7557;InbreedingCoeff=0.9664;MQ=82.46;MQ0=0;MQRankSum=-2.865;QD=44.69;ReadPosRankSum=0.476;VQSLOD=5.1662;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:90.27:0,90,1460	0/0:7,0:7:21.07:0,21,338	0/0:21,0:21:57.19:0,57,933	0/0:18,0:18:51.17:0,51,826	0/0:21,0:21:63.22:0,63,1049	0/0:36,0:36:99:0,105,1735	0/0:21,0:21:57.18:0,57,916	0/0:25,0:25:72.16:0,72,1135	0/0:28,0:28:81.26:0,81,1322	0/0:31,0:31:87.29:0,87,1411	0/0:36,0:36:99:0,105,1675	0/0:30,0:30:78.25:0,78,1274	0/0:35,0:35:96.33:0,96,1595	0/0:29,0:29:75.26:0,75,1249	0/0:28,0:28:69.24:0,69,1149	0/0:27,0:27:81.28:0,81,1350	0/0:27,0:27:78.27:0,78,1285	1/1:3,12:15:36.12:810,36,0	0/0:33,0:33:90.30:0,90,1475	0/0:39,0:39:99:0,114,1897	0/0:28,0:28:81.26:0,81,1313	0/0:20,0:20:45.12:0,45,676	0/0:27,0:27:78.27:0,78,1291	0/0:22,0:22:66.13:0,66,1014	0/0:20,0:20:60.19:0,60,967	0/0:32,0:32:87.30:0,87,1449	0/0:26,0:26:78.25:0,78,1269	0/0:4,0:4:12.04:0,12,200
chr10	58837904	.	GAAGT	G	294.62	PASS	AC=2;AF=0.040;AN=50;BaseQRankSum=2.017;DP=655;FS=8.543;HRun=0;HaplotypeScore=63.4346;InbreedingCoeff=0.7642;MQ=37.13;MQ0=201;MQRankSum=-4.326;QD=32.74;ReadPosRankSum=-0.832;VQSLOD=2.6138;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:22:36.08:0,36,867	0/0:6,0:3:9.03:0,9,238	./.	./.	0/0:26,0:14:33.06:0,33,759	0/0:20,0:14:21.07:0,21,545	0/0:14,0:7:11.99:0,12,201	./.	0/0:29,0:13:33.11:0,33,853	0/0:28,0:17:42.14:0,42,1032	0/0:15,0:11:27.09:0,27,712	0/0:21,0:18:30.06:0,30,733	0/0:14,0:14:30.10:0,30,790	0/0:36,0:9:18.06:0,18,475	0/0:34,1:10:18.02:0,18,406	1/1:0,9:9:20.75:386,21,0	0/0:18,0:8:12.04:0,12,314	0/0:6,0:5:12.04:0,12,302	0/0:18,0:7:16.30:0,16,400	0/0:17,0:9:24.08:0,24,633	0/0:62,1:31:58.36:0,58,1389	0/0:11,0:6:15.05:0,15,396	0/0:7,0:5:12.04:0,12,316	0/0:21,0:14:24.08:0,24,631	0/0:26,0:20:48.16:0,48,1232	0/0:28,2:12:36.12:0,36,896	0/0:33,1:17:42.13:0,42,947	0/0:19,0:12:9.03:0,9,226
chr10	58838437	.	GAGAAGTA	G	3798.84	PASS	AB=0.699;AC=7;AF=0.125;AN=56;BaseQRankSum=9.684;DP=632;FS=0.514;HRun=0;HaplotypeScore=132.3213;InbreedingCoeff=-0.1530;MQ=49.18;MQ0=33;MQRankSum=-10.998;QD=18.90;ReadPosRankSum=2.316;VQSLOD=3.1763;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,111,4277	0/0:9,0:9:24.08:0,24,905	0/0:30,0:5:12.04:0,12,342	0/0:20,0:3:9.03:0,9,330	0/0:31,0:31:90.31:0,90,3520	0/1:12,9:20:99:422,0,1277	0/1:17,13:26:99:270,0,1191	0/0:37,0:34:96.30:0,96,3336	0/0:22,0:22:63.22:0,63,2487	0/0:18,0:13:39.09:0,39,1240	0/0:17,0:15:33.10:0,33,984	0/1:19,15:34:99:744,0,1677	0/1:21,20:40:99:1111,0,2064	0/0:13,0:13:33.11:0,33,1195	0/0:19,0:19:39.13:0,39,1532	0/1:19,21:40:99:1085,0,1671	0/0:23,0:23:66.22:0,66,2556	0/1:7,5:12:57.98:58,0,552	0/0:23,0:18:28.44:0,28,1770	0/0:14,0:14:30.08:0,30,961	0/0:22,0:21:40.18:0,40,1172	0/0:9,6:10:18.06:0,18,726	0/0:15,4:18:8.47:0,8,1523	0/1:16,7:23:99:109,0,1473	0/0:14,0:12:27.09:0,27,946	0/0:18,0:18:51.13:0,51,1912	0/0:21,0:21:57.16:0,57,2074	0/0:6,0:4:9.03:0,9,362
chr10	58838469	.	G	GAGAAGTA	6844.57	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-7.158;DP=571;FS=0.000;HRun=0;HaplotypeScore=134.5794;InbreedingCoeff=0.9666;MQ=50.43;MQ0=10;MQRankSum=-8.684;QD=49.96;ReadPosRankSum=-5.303;VQSLOD=3.2299;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,111,2548	0/0:13,0:13:32.15:0,32,742	0/0:21,0:10:27.06:0,27,534	0/0:26,0:14:37.61:0,38,596	0/0:30,0:30:78.24:0,78,1918	0/0:21,0:21:51.16:0,51,1290	0/0:26,0:23:42.14:0,42,1034	0/0:32,0:32:90.29:0,90,2217	0/0:24,0:24:69.22:0,69,1706	1/1:0,6:5:9.03:360,9,0	1/1:1,10:15:19.18:205,19,0	0/0:34,0:34:84.29:0,84,2236	0/0:36,0:35:96.31:0,96,2472	1/1:2,10:16:24.08:959,24,0	1/1:0,8:12:15.05:541,15,0	0/0:38,0:38:89.95:0,90,2262	0/0:24,0:24:63.19:0,63,1602	0/0:12,0:12:24.08:0,24,633	1/1:3,5:8:19.50:805,20,0	1/1:3,5:10:15.01:274,15,0	1/1:0,9:12:15.01:248,15,0	0/0:18,0:14:27.07:0,27,558	0/0:18,0:17:41.25:0,41,1039	0/0:23,0:23:54.14:0,54,1348	1/1:2,12:15:30.10:720,30,0	1/1:1,11:16:48.15:1624,48,0	1/1:1,8:15:23.95:868,24,0	1/1:1,3:5:6.02:242,6,0
chr10	58838762	.	AT	A	2051.37	PASS	AC=16;AF=0.296;AN=54;BaseQRankSum=9.474;DP=458;FS=0.000;HRun=7;HaplotypeScore=50.9315;InbreedingCoeff=0.9708;MQ=68.25;MQ0=0;MQRankSum=1.391;QD=23.05;ReadPosRankSum=2.286;VQSLOD=3.3387;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:57.16:0,57,702	0/0:14,0:14:39.12:0,39,490	0/0:6,0:3:8.98:0,9,74	0/0:19,0:17:20.62:0,21,237	0/0:37,0:37:99:0,108,1307	1/1:1,18:19:51.12:520,51,0	1/1:1,5:6:15.03:153,15,0	0/0:41,0:41:96.27:0,96,1180	0/0:10,0:10:27.05:0,27,323	0/0:22,0:22:60.18:0,60,734	0/0:28,0:28:75.20:0,75,895	1/1:1,13:14:33.08:337,33,0	1/1:0,13:13:36.08:367,36,0	0/0:10,0:10:30.10:0,30,377	0/0:6,0:6:15.05:0,15,183	0/0:7,0:7:21.04:0,21,237	0/0:28,0:28:81.23:0,81,991	1/1:1,7:8:21.05:214,21,0	0/0:18,0:18:42.13:0,42,518	0/0:23,0:23:66.19:0,66,804	./.	1/1:0,4:4:8.98:80,9,0	1/1:0,19:19:39.09:398,39,0	1/1:0,6:6:18.04:183,18,0	0/0:15,0:15:42:0,42,486	0/0:23,0:23:57.17:0,57,706	0/0:21,0:21:60.12:0,60,734	0/0:18,0:18:51.14:0,51,615
chr10	58840372	.	G	GATACTACC	2567.06	PASS	AB=0.545;AC=1;AF=0.018;AN=56;BaseQRankSum=-5.335;DP=658;FS=5.709;HRun=0;HaplotypeScore=182.1208;InbreedingCoeff=0.0389;MQ=97.10;MQ0=0;MQRankSum=-7.772;QD=71.31;ReadPosRankSum=1.430;VQSLOD=3.3886;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:59,0:59:99:0,166,4357	0/0:8,0:8:21.07:0,21,568	0/0:32,0:32:74.93:0,75,1492	0/0:34,0:34:69.13:0,69,1752	0/0:18,0:18:51.03:0,51,1132	0/0:14,0:14:32.54:0,33,867	0/0:23,0:23:54.14:0,54,1309	0/0:31,0:31:66.10:0,66,1430	0/0:27,0:27:63.22:0,63,1692	0/0:28,0:28:81.25:0,81,2112	0/0:12,0:12:30.10:0,30,801	0/0:26,0:26:72.22:0,72,1737	0/0:26,0:26:69.19:0,69,1783	0/0:29,0:29:75.16:0,75,1886	0/0:31,0:30:90.28:0,90,2325	0/1:6,24:36:15.05:2642,0,15	0/0:28,0:28:78.22:0,78,2004	0/0:10,0:10:30.05:0,30,640	0/0:10,0:10:24:0,24,570	0/0:13,0:13:33.07:0,33,800	0/0:31,0:31:87.24:0,87,2220	0/0:12,0:12:36.11:0,36,875	0/0:14,0:14:39.13:0,39,1057	0/0:36,0:36:99:0,102,2565	0/0:13,0:13:33.03:0,33,718	0/0:25,0:25:60.12:0,60,1439	0/0:24,0:24:69.24:0,69,1842	0/0:8,0:8:18.06:0,18,488
chr10	58842128	.	TG	T	2780	PASS	AB=0.756;AC=23;AF=0.411;AN=56;BaseQRankSum=-5.325;DP=475;FS=0.480;HRun=11;HaplotypeScore=84.2020;InbreedingCoeff=0.6743;MQ=74.41;MQ0=1;MQRankSum=0.375;QD=11.54;ReadPosRankSum=7.361;VQSLOD=3.0765;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:13.65:0,14,88	0/0:1,0:1:0.47:0,0,1	0/0:14,1:15:5.05:0,5,214	0/0:11,0:12:21.25:0,21,147	0/0:8,0:17:5.93:0,6,40	0/1:7,0:15:3.23:3,0,53	0/0:15,0:15:18.19:0,18,131	0/0:9,0:9:0:0,0,0	0/0:23,0:23:47.39:0,47,587	1/1:8,7:15:30.79:239,31,0	1/1:3,8:10:11.98:99,12,0	0/0:14,0:14:16.05:0,16,102	0/0:11,0:16:23.60:0,24,151	1/1:6,18:25:49.97:399,50,0	1/1:4,13:17:38.94:320,39,0	0/0:11,0:25:23.96:0,24,144	0/0:10,0:15:14.72:0,15,94	1/1:5,9:15:22.99:178,23,0	0/1:11,11:22:15.07:212,0,15	1/1:8,12:21:21.40:258,21,0	1/1:10,16:26:34.76:271,35,0	0/0:10,0:11:11.72:0,12,87	0/0:9,0:9:17.84:0,18,131	0/0:19,0:29:23.15:0,23,141	1/1:17,11:27:53.94:403,54,0	1/1:7,8:15:0.80:157,1,0	1/1:6,14:20:38.90:315,39,0	0/1:3,6:9:32.09:124,0,32
chr10	58842436	.	AG	A	1059.74	PASS	AB=1.000;AC=26;AF=0.464;AN=56;BaseQRankSum=5.078;DP=412;FS=5.355;HRun=10;HaplotypeScore=176.0096;InbreedingCoeff=0.4923;MQ=76.41;MQ0=5;MQRankSum=-2.282;QD=5.17;ReadPosRankSum=1.596;VQSLOD=0.2529;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:10.22:0,10,111	1/1:4,0:4:2.59:25,3,0	0/0:40,0:17:3.47:0,3,121	0/0:27,1:20:0.43:0,0,74	0/1:13,0:13:10.12:10,0,35	1/1:11,2:13:27.63:151,28,0	1/1:25,1:26:33.53:238,34,0	0/0:13,0:13:7.02:0,7,21	0/0:11,0:11:13.23:0,13,62	0/0:7,0:7:8.05:0,8,40	0/1:5,0:5:0.01:3,0,0	1/1:14,1:15:19.20:119,19,0	1/1:11,0:11:23.64:158,24,0	0/0:16,0:16:12.82:0,13,85	0/0:19,0:19:8.01:0,8,92	1/1:19,0:19:32.37:203,32,0	0/0:17,0:17:10.59:0,11,66	1/1:8,0:8:11.83:82,12,0	0/0:17,0:17:13.54:0,14,93	0/0:13,0:13:0.37:0,0,15	0/1:15,0:15:14.51:28,0,15	1/1:13,1:14:26.06:151,26,0	1/1:9,0:10:6.18:28,6,0	1/1:12,0:12:5.91:38,6,0	0/1:12,0:12:3.37:3,0,73	0/1:7,0:7:1:1,0,8	0/1:21,0:21:0.12:0,0,51	0/0:4,0:4:3.59:0,4,10
chr10	58842445	.	G	GA	1174.38	PASS	AB=0.929;AC=22;AF=0.393;AN=56;BaseQRankSum=4.410;DP=350;FS=8.350;HRun=0;HaplotypeScore=172.1580;InbreedingCoeff=0.5941;MQ=64.97;MQ0=5;MQRankSum=-4.298;QD=7.68;ReadPosRankSum=3.005;VQSLOD=3.1321;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:31.08:0,31,247	0/1:3,1:4:6.82:7,0,89	0/0:35,0:12:14.55:0,15,221	0/1:21,0:13:6.58:7,0,77	0/0:11,0:11:7.97:0,8,56	1/1:4,6:12:25.04:194,25,0	1/1:5,9:19:25.95:287,26,0	0/1:10,0:10:2.93:3,0,56	0/0:13,0:13:24.91:0,25,247	0/0:7,0:7:6.69:0,7,32	0/0:4,0:4:9:0,9,85	1/1:8,3:14:8.30:95,8,0	1/1:2,5:11:22.88:129,23,0	0/0:16,0:16:30.81:0,31,324	0/0:13,0:14:10.65:0,11,217	1/1:1,10:18:31.30:212,31,0	0/0:16,0:16:30.83:0,31,268	1/1:1,2:5:5.68:76,6,0	0/0:15,0:15:28.29:0,28,320	0/0:8,0:8:1.77:0,2,55	0/1:9,1:11:31.57:52,0,32	1/1:1,5:9:26.42:202,26,0	1/1:1,1:9:8.93:64,9,0	1/1:0,3:10:5.92:40,6,0	0/0:11,1:12:5.55:0,6,154	0/0:6,0:6:11.75:0,12,93	0/0:17,1:18:17.04:0,17,342	0/0:3,0:3:5.99:0,6,51
chr10	58842450	.	AAAAG	A	3102.10	PASS	AB=0.961;AC=41;AF=0.732;AN=56;BaseQRankSum=7.042;DP=301;FS=45.208;HRun=0;HaplotypeScore=161.3104;InbreedingCoeff=-0.0502;MQ=60.36;MQ0=5;MQRankSum=-3.105;QD=12.31;ReadPosRankSum=4.889;VQSLOD=1.0075;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:14,0:14:25.97:105,0,26	0/1:2,1:3:0.17:50,0,0	0/0:29,0:6:17.27:0,17,346	0/0:20,0:12:9.86:0,10,164	0/1:8,0:8:17.61:56,0,18	1/1:5,6:11:29.32:363,29,0	1/1:8,10:18:46.94:477,47,0	1/1:7,0:7:14.59:107,15,0	0/1:11,0:11:22.99:39,0,23	0/1:3,0:3:19.77:46,0,20	1/1:4,0:4:8.29:37,8,0	1/1:12,3:15:17.72:152,18,0	1/1:6,5:11:26.67:292,27,0	0/1:14,0:14:24.63:25,0,51	0/1:10,0:10:10.50:36,0,10	1/1:7,10:17:32.47:403,32,0	1/1:13,0:13:7.75:95,8,0	1/1:3,2:5:10.66:168,11,0	0/1:12,0:12:21.24:79,0,21	0/1:9,0:9:14.73:15,0,35	1/1:7,1:8:5.93:72,6,0	1/1:4,5:9:15.93:227,16,0	0/1:6,1:7:16.73:32,0,17	1/1:7,3:10:5.64:73,6,0	1/1:8,1:9:11.14:105,11,0	1/1:5,0:5:3.27:38,3,0	0/1:15,1:16:22.14:139,0,22	1/1:3,0:3:5.85:36,6,0
chr10	58842451	.	AAAG	A	4101.84	PASS	AB=1.000;AC=44;AF=0.786;AN=56;BaseQRankSum=5.440;DP=326;FS=26.537;HRun=0;HaplotypeScore=177.1435;InbreedingCoeff=0.1552;MQ=58.14;MQ0=5;MQRankSum=-2.834;QD=14.75;ReadPosRankSum=4.232;VQSLOD=1.9209;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:14:10.92:125,11,0	0/1:5,0:5:5.60:58,0,6	0/0:28,0:6:17.42:0,17,275	0/0:19,0:11:15.56:0,16,135	0/1:8,0:8:6.68:52,0,7	1/1:13,0:13:35.57:429,36,0	1/1:18,0:18:47.34:587,47,0	1/1:7,0:7:10.37:85,10,0	0/1:13,0:13:5.42:65,0,5	0/1:4,0:4:9.17:37,0,9	0/1:5,0:5:7.18:42,0,7	1/1:7,8:15:17.73:188,18,0	1/1:13,0:13:32.85:381,33,0	0/1:15,0:15:26.95:52,0,27	0/1:11,0:11:4.52:62,0,5	1/1:17,0:17:33.10:500,33,0	1/1:13,0:13:19.09:152,19,0	1/1:5,0:5:10.06:174,10,0	1/1:13,0:13:4.12:112,4,0	0/1:9,0:9:8.34:8,0,21	1/1:10,0:10:9.42:93,9,0	1/1:8,0:8:20.59:273,21,0	1/1:9,0:9:8.70:83,9,0	1/1:13,0:13:8.51:96,9,0	1/1:13,0:13:12.32:122,12,0	1/1:5,0:5:10.15:63,10,0	1/1:16,0:16:9.90:213,10,0	1/1:6,0:6:6.75:48,7,0
chr10	58842452	.	AAG	A	5633.75	PASS	AB=0.729;AC=50;AF=0.893;AN=56;BaseQRankSum=-0.852;DP=320;FS=12.789;HRun=0;HaplotypeScore=166.3917;InbreedingCoeff=0.4174;MQ=54.82;MQ0=5;MQRankSum=-3.097;QD=20.56;ReadPosRankSum=4.244;VQSLOD=4.7212;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,13:14:22.62:256,23,0	0/1:4,1:5:12.17:101,0,12	0/0:28,0:5:12.84:0,13,149	0/0:18,0:10:1.85:0,2,83	1/1:0,8:8:8.96:103,9,0	1/1:10,2:12:34.97:357,35,0	1/1:17,0:17:46.80:453,47,0	1/1:4,3:7:17.86:211,18,0	1/1:0,13:13:20.86:232,21,0	1/1:2,2:4:4.54:93,5,0	0/1:2,3:5:2.02:121,0,2	1/1:14,0:14:17.51:120,18,0	1/1:11,2:13:32.47:332,32,0	1/1:1,14:15:19.65:202,20,0	1/1:1,10:11:17.67:180,18,0	1/1:17,0:17:32.69:390,33,0	1/1:2,11:13:27.03:362,27,0	1/1:5,0:5:14.81:162,15,0	1/1:5,7:12:30.81:347,31,0	1/1:6,3:9:8.67:55,9,0	1/1:6,4:10:5.98:89,6,0	1/1:8,0:8:20.75:220,21,0	1/1:9,0:9:8.72:67,9,0	1/1:13,0:13:9.08:81,9,0	1/1:1,12:13:19.55:243,20,0	1/1:0,5:5:12.04:170,12,0	1/1:3,13:16:42.05:595,42,0	1/1:2,4:6:5.99:91,6,0
chr10	58842458	.	G	GAA	4190.31	PASS	AB=0.636;AC=51;AF=0.911;AN=56;BaseQRankSum=2.461;DP=285;FS=23.497;HRun=0;HaplotypeScore=173.2714;InbreedingCoeff=0.5545;MQ=52.88;MQ0=3;MQRankSum=-2.874;QD=16.30;ReadPosRankSum=3.397;VQSLOD=1.7747;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,1:15:15.18:145,15,0	1/1:2,2:4:11.89:104,12,0	0/0:16,0:4:9.25:0,9,72	0/0:12,0:7:10.16:0,10,43	1/1:8,0:8:9.03:119,9,0	1/1:8,4:12:35.24:317,35,0	1/1:11,5:16:38.81:363,39,0	1/1:5,1:6:15.05:213,15,0	1/1:13,0:13:11.87:109,12,0	1/1:2,1:3:9.03:131,9,0	1/1:3,1:4:11.51:62,12,0	1/1:12,0:12:5.55:33,6,0	1/1:9,2:11:25.71:262,26,0	1/1:13,1:14:11.76:109,12,0	1/1:10,1:11:11.89:135,12,0	1/1:18,0:18:38.06:282,38,0	1/1:12,1:13:22.66:174,23,0	1/1:2,2:4:11.95:124,12,0	1/1:8,2:10:29.46:297,29,0	0/1:3,1:7:6.03:48,0,6	1/1:5,4:9:5.86:47,6,0	1/1:6,1:8:20.40:167,20,0	1/1:3,3:6:7.83:76,8,0	1/1:8,4:12:14.95:137,15,0	1/1:13,0:13:14.76:141,15,0	1/1:5,0:5:11.89:120,12,0	1/1:16,0:16:39.85:296,40,0	1/1:5,2:7:14.96:179,15,0
chr10	58842476	.	G	GAGA	5132.61	PASS	AB=0.933;AC=32;AF=0.640;AN=50;BaseQRankSum=-7.265;DP=317;FS=8.279;HRun=0;HaplotypeScore=280.2228;InbreedingCoeff=-0.5283;MQ=30.28;MQ0=1;MQRankSum=0.030;QD=16.35;ReadPosRankSum=-7.547;VQSLOD=2.2630;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:18,0:18:46.46:124,0,46	0/1:2,2:4:3.46:85,0,3	./.	./.	0/1:6,0:6:28.65:29,0,29	0/1:18,1:18:41.04:368,0,41	0/1:20,0:19:48.50:66,0,49	./.	0/1:10,0:10:20.59:144,0,21	1/1:17,1:15:25.09:536,25,0	0/1:7,1:7:13.18:143,0,13	1/1:10,0:10:11.96:180,12,0	0/1:16,0:15:16.84:379,0,17	1/1:12,1:13:0.20:247,0,0	1/1:13,0:12:5.45:222,5,0	0/1:19,0:19:85.34:85,0,99	0/1:11,1:12:13.37:119,0,13	0/1:7,0:7:12.04:120,0,12	0/1:9,2:11:35.34:329,0,35	1/1:11,0:10:16.81:273,17,0	0/1:11,2:12:1.12:104,0,1	0/1:10,0:10:33.33:45,0,33	1/1:5,1:6:7.60:152,8,0	0/1:17,1:18:40.58:190,0,41	1/1:21,0:19:15.89:446,16,0	0/1:5,0:5:4.55:129,0,5	0/1:19,0:19:48.08:341,0,48	0/1:4,3:7:0.12:276,0,0
chr10	58842512	.	AGAG	A	1251.10	PASS	AB=0.924;AC=9;AF=0.161;AN=56;BaseQRankSum=1.616;DP=666;FS=24.706;HRun=0;HaplotypeScore=254.5621;InbreedingCoeff=-0.2103;MQ=44.09;MQ0=9;MQRankSum=-2.977;QD=5.04;ReadPosRankSum=-4.827;VQSLOD=0.2869;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,1:35:48.19:0,48,1569	0/0:5,0:5:15.05:0,15,305	0/0:21,0:10:22.81:0,23,242	0/0:37,0:12:4.60:0,5,233	0/1:22,1:22:26.97:27,0,1035	0/0:30,0:29:56.46:0,56,1518	0/0:28,0:27:62.37:0,62,1067	0/1:48,0:48:99:478,0,1400	0/0:16,0:16:35.15:0,35,658	0/1:30,0:27:5.15:5,0,1383	0/1:18,3:19:95.87:96,0,686	0/0:18,0:18:42.14:0,42,879	0/0:19,1:19:1.03:0,1,858	0/0:25,0:25:69.22:0,69,1239	0/1:22,2:23:66.21:66,0,825	0/0:25,0:25:72.17:0,72,1331	0/0:26,1:27:55:0,55,1028	0/0:10,0:10:24.08:0,24,457	0/1:25,12:37:99:537,0,1298	0/1:18,3:19:99:109,0,696	0/0:23,1:23:8.72:0,9,879	0/0:14,2:16:3.15:0,3,629	0/0:11,0:11:31.66:0,32,566	0/0:24,2:26:22.14:0,22,697	0/0:29,1:28:19.09:0,19,1192	0/1:18,0:18:5.06:5,0,769	0/1:24,2:25:61:61,0,1110	0/0:11,0:11:30.10:0,30,611
chr10	58842639	.	C	CT	3637.14	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-7.410;DP=612;FS=8.490;HRun=9;HaplotypeScore=65.8716;InbreedingCoeff=0.9833;MQ=72.88;MQ0=0;MQRankSum=-1.320;QD=25.08;ReadPosRankSum=0.864;VQSLOD=4.2482;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,1:44:80.76:0,81,923	0/0:8,0:8:20.98:0,21,179	0/0:14,0:15:23.99:0,24,208	0/0:21,0:19:34.51:0,35,305	0/0:27,0:27:68.96:0,69,595	1/1:4,20:24:34.11:604,34,0	1/1:2,16:18:39.11:431,39,0	0/0:33,0:34:52.82:0,53,676	0/0:22,0:22:56.98:0,57,495	0/0:26,0:26:56.97:0,57,493	0/0:19,0:19:50.98:0,51,440	1/1:4,19:23:48.12:531,48,0	1/1:1,14:15:10.04:339,10,0	0/0:21,0:21:26.34:0,26,438	0/0:20,0:20:47.96:0,48,413	0/0:23,0:23:59.97:0,60,521	0/0:24,0:24:65.99:0,66,573	0/0:19,0:20:56:0,56,470	0/0:25,0:25:62.97:0,63,544	0/0:20,1:21:11.59:0,12,331	0/0:19,0:19:50.97:0,51,439	1/1:3,21:24:37.59:638,38,0	1/1:1,17:18:48.13:530,48,0	1/1:4,19:23:51.14:564,51,0	0/0:18,0:18:44.95:0,45,386	0/0:26,0:27:68.01:0,68,579	0/0:19,0:19:29.74:0,30,418	0/0:14,0:14:23.59:0,24,208
chr10	58843151	.	CA	C	337.16	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.346;DP=940;FS=1.044;HRun=4;HaplotypeScore=78.4477;InbreedingCoeff=0.8951;MQ=44.73;MQ0=151;MQRankSum=1.050;QD=9.37;ReadPosRankSum=1.134;VQSLOD=0.6699;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:81,1:71:99:0,114,1898	0/0:15,0:14:39.13:0,39,545	0/0:8,0:4:9.03:0,9,114	0/0:7,0:4:9.03:0,9,120	0/0:33,0:30:75.19:0,75,1010	0/0:33,0:28:69.23:0,69,964	0/0:35,0:29:66.16:0,66,882	0/0:38,0:32:96.24:0,96,1280	0/0:43,0:35:96.29:0,96,1321	0/0:36,0:29:81.20:0,81,1091	0/0:35,0:30:75.24:0,75,1035	0/0:43,0:40:99:0,105,1452	0/0:38,0:33:77.98:0,78,1067	0/0:45,0:39:99:0,105,1467	0/0:39,0:31:87.29:0,87,1216	0/0:39,0:31:78.15:0,78,1027	0/0:48,0:34:69.19:0,69,944	1/1:23,13:15:36.11:432,36,0	0/0:21,0:17:45.15:0,45,624	0/0:33,0:24:60.13:0,60,798	0/0:43,0:25:66.13:0,66,874	0/0:27,0:24:66.17:0,66,885	0/0:16,0:15:30.10:0,30,420	0/0:36,0:28:54.17:0,54,738	0/0:18,0:16:45.15:0,45,630	0/0:40,0:33:93.31:0,93,1296	0/0:33,0:28:84.24:0,84,1138	0/0:20,0:14:36.09:0,36,479
chr10	58844737	.	G	GA	4541.21	PASS	AB=0.889;AC=19;AF=0.339;AN=56;BaseQRankSum=-9.844;DP=607;FS=8.627;HRun=9;HaplotypeScore=58.8631;InbreedingCoeff=0.9005;MQ=75.83;MQ0=0;MQRankSum=-1.669;QD=21.42;ReadPosRankSum=1.178;VQSLOD=5.4586;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,2:28:41.97:0,42,592	0/0:5,0:5:12:0,12,104	0/0:16,0:16:32.98:0,33,284	0/0:9,0:9:14.17:0,14,172	0/0:24,0:24:62.93:0,63,538	1/1:5,12:17:36.10:398,36,0	1/1:2,9:11:21.06:232,21,0	0/0:27,0:28:67.98:0,68,571	0/0:15,0:15:41.99:0,42,365	0/0:29,1:30:45:0,45,615	0/0:16,0:16:38.98:0,39,339	1/1:4,23:27:60.15:657,60,0	1/1:4,17:22:53.98:578,54,0	0/0:37,0:38:99:0,101,862	0/0:27,0:27:68.96:0,69,599	1/1:0,0:23:14.08:68,14,0	0/0:27,0:28:77.02:0,77,657	1/1:3,21:24:63.17:697,63,0	0/0:20,0:20:41.98:0,42,364	0/0:23,0:23:62.98:0,63,545	0/1:14,2:16:33.36:33,0,198	1/1:3,24:27:66.14:717,66,0	1/1:4,25:29:69.19:763,69,0	1/1:3,13:16:36.10:398,36,0	0/0:26,0:26:68.98:0,69,596	0/0:28,0:28:71.69:0,72,605	0/0:30,1:31:47.78:0,48,644	0/0:3,0:3:9:0,9,78
chr10	58846268	.	TGTGGG	T	4615.19	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=7.683;DP=611;FS=12.542;HRun=0;HaplotypeScore=189.5230;InbreedingCoeff=0.9447;MQ=68.55;MQ0=0;MQRankSum=-6.492;QD=25.93;ReadPosRankSum=-0.603;VQSLOD=3.7185;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,102,3134	0/0:9,0:9:24.08:0,24,737	0/0:27,0:19:54.18:0,54,1578	0/0:30,0:23:60.20:0,60,1715	0/0:22,0:22:63.22:0,63,1938	1/1:19,0:19:42.50:463,42,0	1/1:14,0:14:20.18:332,20,0	0/0:22,0:22:63.22:0,63,1895	0/0:22,0:22:66.23:0,66,2051	0/0:29,0:29:84.29:0,84,2484	0/0:18,0:18:45.14:0,45,1315	1/1:17,0:17:17.19:348,17,0	0/1:27,0:27:1.81:461,0,2	0/0:22,0:22:63.22:0,63,1912	0/0:20,0:20:54.19:0,54,1665	1/1:4,14:18:54.19:1147,54,0	0/0:24,0:24:72.25:0,72,2190	1/1:15,0:15:36.10:506,36,0	0/0:22,0:22:66.23:0,66,1975	0/0:34,0:34:99:0,99,2978	0/0:12,0:12:36.12:0,36,1033	1/1:20,0:20:16.09:455,16,0	1/1:23,0:23:32.60:531,33,0	1/1:25,0:25:29.90:372,30,0	0/0:32,0:32:69.72:0,70,2476	0/0:26,0:26:72.25:0,72,2092	0/0:18,0:17:51.18:0,51,1533	0/0:10,0:10:30.10:0,30,926
chr10	58846270	.	TGGGG	T	5428.05	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=10.284;DP=606;FS=8.143;HRun=4;HaplotypeScore=176.5342;InbreedingCoeff=0.9994;MQ=66.40;MQ0=2;MQRankSum=-9.800;QD=32.31;ReadPosRankSum=0.703;VQSLOD=1.2480;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,105,2867	0/0:8,0:8:24.08:0,24,661	0/0:27,0:18:54.18:0,54,1437	0/0:28,0:21:60.18:0,60,1536	0/0:21,0:21:63.22:0,63,1740	1/1:17,0:19:55.93:653,56,0	1/1:10,2:13:33.61:429,34,0	0/0:23,0:23:69.24:0,69,1885	0/0:25,0:25:75.26:0,75,2024	0/0:28,0:28:84.29:0,84,2243	0/0:17,0:17:45.12:0,45,1177	1/1:14,1:16:45.05:554,45,0	1/1:17,5:25:68.07:713,68,0	0/0:22,0:22:66.23:0,66,1820	0/0:21,0:21:57.08:0,57,1575	1/1:15,3:18:54.17:717,54,0	0/0:26,0:26:78.27:0,78,2099	1/1:2,4:14:36.01:547,36,0	0/0:23,0:23:69.24:0,69,1847	0/0:34,0:34:99:0,99,2689	0/0:12,0:12:36.12:0,36,948	1/1:17,0:19:52.76:652,53,0	1/1:14,5:21:59.08:722,59,0	1/1:19,2:23:30.05:441,30,0	0/0:32,0:32:92.78:0,93,2366	0/0:26,0:26:78.27:0,78,2039	0/0:18,0:17:51.18:0,51,1373	0/0:10,0:10:30.10:0,30,828
chr10	58846291	.	GTTGT	G	6566.17	PASS	AB=1.000;AC=27;AF=0.482;AN=56;BaseQRankSum=5.777;DP=616;FS=3.564;HRun=0;HaplotypeScore=163.6745;InbreedingCoeff=0.8817;MQ=55.92;MQ0=10;MQRankSum=2.752;QD=21.96;ReadPosRankSum=3.439;VQSLOD=4.3297;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:16,19:34:46.30:735,46,0	0/0:9,0:9:21.07:0,21,504	0/0:26,0:15:15.05:0,15,239	0/0:39,0:26:27.08:0,27,415	0/0:21,0:21:57.19:0,57,1165	0/0:19,0:19:36.01:0,36,588	0/0:12,0:12:24:0,24,354	0/0:32,0:32:48.15:0,48,782	0/0:24,0:24:60.19:0,60,1317	1/1:12,18:30:60.09:866,60,0	1/1:5,13:18:36.12:551,36,0	0/0:22,0:22:23.88:0,24,812	0/0:23,0:23:45.04:0,45,753	1/1:6,13:19:27.09:432,27,0	1/1:6,15:21:30.02:480,30,0	1/1:19,0:19:0.76:66,1,0	0/0:25,0:25:60.20:0,60,1285	0/1:16,0:16:86.22:89,0,86	1/1:12,6:16:21.07:322,21,0	1/1:9,21:30:57.19:843,57,0	1/1:4,9:14:9.02:124,9,0	0/0:18,0:18:27.09:0,27,495	0/0:24,0:24:34.93:0,35,601	0/0:23,0:23:23.47:0,23,374	1/1:9,15:24:45.15:721,45,0	1/1:9,15:24:42.14:638,42,0	1/1:5,16:21:27.08:411,27,0	1/1:3,6:9:18.06:288,18,0
chr10	58846294	.	GT	G	1724.70	PASS	AB=0.970;AC=14;AF=0.250;AN=56;BaseQRankSum=10.485;DP=610;FS=4.639;HRun=3;HaplotypeScore=142.2175;InbreedingCoeff=-0.1623;MQ=56.04;MQ0=10;MQRankSum=0.364;QD=6.18;ReadPosRankSum=5.708;VQSLOD=0.6371;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:32:79.84:80,0,303	0/0:9,0:9:27.09:0,27,382	0/0:27,0:14:39.08:0,39,492	0/0:38,0:26:45.20:0,45,672	0/0:23,0:23:69.23:0,69,972	0/0:19,0:19:40.80:0,41,272	0/0:13,0:13:2.95:0,3,169	0/0:34,0:34:99:0,102,1369	0/0:24,0:24:69.23:0,69,981	0/1:28,2:30:99:279,0,179	0/1:18,0:18:99:172,0,141	0/0:20,1:21:20.29:0,20,347	0/0:25,0:25:37.23:0,37,396	0/1:19,0:19:13.10:13,0,204	0/1:21,0:21:17.10:17,0,177	1/1:3,17:20:57.18:713,57,0	0/0:27,0:27:78.26:0,78,1094	0/1:10,0:17:75.23:78,0,75	0/1:18,0:15:57.14:57,0,135	0/1:29,0:29:99:262,0,220	0/0:14,0:14:4.67:0,5,129	0/0:17,0:17:33.97:0,34,232	0/0:20,0:20:45.19:0,45,338	0/0:20,0:20:22.57:0,23,175	0/1:24,0:24:34.12:34,0,270	0/1:22,0:22:99:117,0,229	0/1:19,0:18:49.16:49,0,56	0/1:9,0:9:11.57:12,0,100
chr10	58846656	.	TC	T	6436.31	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=0.589;DP=570;FS=2.001;HRun=9;HaplotypeScore=67.5617;InbreedingCoeff=0.9887;MQ=76.96;MQ0=0;MQRankSum=-2.539;QD=22.74;ReadPosRankSum=3.279;VQSLOD=5.7754;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:51.15:0,51,588	0/0:12,0:12:33.10:0,33,381	0/0:21,0:21:48.01:0,48,506	0/0:16,0:15:25.23:0,25,268	0/0:24,0:24:60.14:0,60,685	0/0:8,0:30:45.62:0,46,251	0/0:5,0:15:25.57:0,26,130	0/0:25,0:25:54.12:0,54,594	0/0:14,0:15:35.93:0,36,386	1/1:4,18:22:57.02:517,57,0	1/1:2,26:28:72.04:658,72,0	0/0:3,0:11:8.52:0,9,43	0/0:5,0:15:17.04:0,17,87	1/1:1,20:21:52.44:491,52,0	1/1:4,27:31:75.03:686,75,0	1/1:4,22:26:31.42:542,31,0	0/0:25,1:26:41.75:0,42,734	1/1:3,21:24:60.03:549,60,0	1/1:3,12:15:32.99:297,33,0	1/1:2,29:33:83.07:747,83,0	1/1:2,13:15:39.02:357,39,0	0/0:4,0:14:22.93:0,23,136	0/0:5,0:25:48.62:0,49,276	0/0:5,0:18:34.43:0,34,214	1/1:0,16:16:48.03:439,48,0	1/1:3,18:21:54.03:494,54,0	1/1:4,17:21:45.01:412,45,0	1/1:0,10:10:27.01:247,27,0
chr10	58847450	.	CA	C	517.70	PASS	AB=0.991;AC=10;AF=0.179;AN=56;BaseQRankSum=13.780;DP=587;FS=3.830;HRun=1;HaplotypeScore=79.0552;InbreedingCoeff=0.4994;MQ=78.64;MQ0=0;MQRankSum=-1.073;QD=3.30;ReadPosRankSum=4.267;VQSLOD=0.3413;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:89.31:0,89,1250	0/0:11,0:11:33.07:0,33,443	0/0:22,1:22:29.26:0,29,565	0/0:23,0:18:26.67:0,27,303	0/0:24,0:24:69.11:0,69,901	0/1:34,0:34:66.49:66,0,102	0/1:26,1:27:25.54:104,0,26	0/0:21,0:21:56.91:0,57,577	0/0:17,0:17:47.97:0,48,629	0/0:13,0:13:39.11:0,39,520	0/0:22,2:24:60.20:0,60,800	0/1:15,0:15:43.82:59,0,44	1/1:17,0:17:10.87:105,11,0	0/0:15,0:15:44.72:0,45,566	0/0:21,0:21:63.20:0,63,862	0/0:19,0:18:57.13:0,57,744	0/0:24,0:23:72.23:0,72,996	0/0:13,0:13:39.07:0,39,506	0/0:18,0:18:39.10:0,39,573	0/0:21,0:21:54.16:0,54,752	0/0:19,0:19:50.89:0,51,677	0/1:25,0:25:4.95:122,0,5	1/1:14,0:14:4.81:68,5,0	1/1:25,0:25:24.89:147,25,0	0/0:23,0:23:65.99:0,66,836	0/0:24,0:24:72.21:0,72,964	0/0:32,0:32:85.86:0,86,1182	0/0:11,0:11:33.05:0,33,425
chr10	58847451	.	AC	A	3435.21	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=9.628;DP=585;FS=4.608;HRun=8;HaplotypeScore=68.2802;InbreedingCoeff=0.9915;MQ=78.87;MQ0=0;MQRankSum=-0.397;QD=22.16;ReadPosRankSum=2.987;VQSLOD=4.3772;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,1:34:64.18:0,64,977	0/0:11,0:11:30.06:0,30,347	0/0:24,0:23:21.91:0,22,351	0/0:23,0:18:11.17:0,11,131	0/0:23,0:23:63.10:0,63,736	1/1:6,27:33:67.91:642,68,0	1/1:4,22:26:60.09:578,60,0	0/0:20,0:20:21.06:0,21,252	0/0:17,0:17:45.10:0,45,509	0/0:13,0:13:39.11:0,39,458	0/0:25,0:25:60.16:0,60,700	1/1:4,12:16:31.29:293,31,0	1/1:1,16:17:42.06:405,42,0	0/0:16,0:16:39.09:0,39,445	0/0:21,0:21:63.13:0,63,694	0/0:19,0:18:48.12:0,48,549	0/0:24,0:23:72.21:0,72,855	0/0:13,0:13:33.08:0,33,378	0/0:17,0:17:36.08:0,36,403	0/0:21,0:21:63.13:0,63,704	0/0:19,0:19:48.12:0,48,548	1/1:2,23:25:59.88:563,60,0	1/1:1,13:14:39.06:376,39,0	1/1:1,23:24:60.10:579,60,0	0/0:23,0:23:60.09:0,60,654	0/0:24,0:24:63.16:0,63,738	0/0:32,0:32:87.16:0,87,988	0/0:11,0:11:27.06:0,27,311
chr10	58848903	.	G	GCATA	443.31	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-2.033;DP=613;FS=1.473;HRun=0;HaplotypeScore=108.1412;InbreedingCoeff=0.9901;MQ=69.81;MQ0=0;MQRankSum=-3.571;QD=36.94;ReadPosRankSum=-2.421;VQSLOD=3.4791;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:75.26:0,75,1355	0/0:14,0:14:39.13:0,39,709	0/0:27,0:26:68.80:0,69,1132	0/0:26,0:25:57.17:0,57,976	0/0:28,0:28:81.28:0,81,1467	0/0:22,0:22:60.21:0,60,1078	0/0:21,0:21:63.20:0,63,1102	0/0:19,0:19:48.15:0,48,840	0/0:23,0:23:57.20:0,57,1035	0/0:21,0:21:60.21:0,60,1079	0/0:16,0:16:42.14:0,42,750	0/0:22,0:22:63.22:0,63,1136	0/0:18,0:18:45.15:0,45,818	0/0:18,0:18:48.15:0,48,843	0/0:17,0:17:48.16:0,48,873	1/1:8,4:12:19.52:535,20,0	0/0:30,0:30:81.28:0,81,1442	0/0:26,0:26:75.22:0,75,1288	0/0:18,0:18:51.17:0,51,919	0/0:17,0:17:45.15:0,45,817	0/0:32,0:32:93.32:0,93,1692	0/0:9,0:9:21.07:0,21,377	0/0:19,0:19:48.16:0,48,859	0/0:21,0:21:57.18:0,57,1006	0/0:23,0:23:60.21:0,60,1089	0/0:33,0:33:90.31:0,90,1634	0/0:30,0:30:84.27:0,84,1482	0/0:19,0:19:54.19:0,54,982
chr10	58849459	.	TATATATATAC	T	234.72	PASS	AB=1.000;AC=10;AF=0.455;AN=22;BaseQRankSum=-1.350;DP=95;FS=0.000;HRun=0;HaplotypeScore=42.9481;InbreedingCoeff=0.1873;MQ=68.04;MQ0=3;MQRankSum=-1.778;QD=3.13;ReadPosRankSum=-1.054;VQSLOD=1.0099;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:5.10:0,5,282	./.	1/1:13,0:4:0.74:1,1,0	0/1:13,0:4:0:0,0,0	0/0:2,0:2:6.02:0,6,111	./.	./.	1/1:7,0:6:11.97:100,12,0	0/1:4,0:4:2.62:3,0,322	./.	0/0:1,0:1:3.01:0,3,98	./.	./.	./.	./.	0/0:2,0:2:3.40:0,3,17	1/1:3,16:19:6.02:189,6,0	0/1:15,0:14:29.35:29,0,444	./.	./.	./.	./.	./.	./.	./.	./.	./.	0/1:4,0:4:4.05:4,0,37
chr10	58849865	.	ATAAG	A	795.42	PASS	AB=0.977;AC=14;AF=0.250;AN=56;BaseQRankSum=6.159;DP=285;FS=41.570;HRun=0;HaplotypeScore=56.7352;InbreedingCoeff=-0.3386;MQ=61.11;MQ0=3;MQRankSum=-0.259;QD=5.56;ReadPosRankSum=0.391;VQSLOD=0.1749;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:21,0:21:99:135,0,170	0/0:1,0:1:1.82:0,2,5	0/0:3,0:3:6:0,6,55	0/0:6,0:6:8.97:0,9,72	0/1:12,0:12:33.05:33,0,139	0/1:13,0:12:48.03:91,0,48	0/1:5,0:5:33.54:34,0,41	0/0:32,0:28:15:0,15,496	0/0:6,0:6:17.96:0,18,144	0/1:11,0:11:5.72:6,0,358	0/1:10,0:10:99:128,0,197	0/1:11,0:11:80.36:80,0,89	0/1:7,0:7:12.05:12,0,105	0/0:4,0:4:11.94:0,12,147	0/0:11,0:11:26.96:0,27,270	0/0:6,0:6:15.04:0,15,292	0/0:24,0:24:53.95:0,54,658	0/0:15,0:15:25.94:0,26,561	0/1:15,0:14:20.84:21,0,325	0/1:6,0:6:73.69:74,0,111	0/0:3,0:3:9:0,9,102	0/1:4,0:4:17.99:23,0,18	0/1:4,0:4:12.04:54,0,12	0/1:5,0:5:15.01:37,0,15	0/0:11,0:11:18.01:0,18,208	0/0:7,0:7:3.73:0,4,154	0/0:12,0:11:5.57:0,6,253	0/1:10,9:19:99:217,0,192
chr10	58849869	.	G	GTAAA	3051.52	PASS	AB=0.934;AC=40;AF=0.769;AN=52;BaseQRankSum=-5.798;DP=274;FS=19.849;HRun=0;HaplotypeScore=47.9102;InbreedingCoeff=0.3316;MQ=61.18;MQ0=3;MQRankSum=0.861;QD=13.27;ReadPosRankSum=-4.319;VQSLOD=-0.1281;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:8,0:20:45.17:45,0,116	1/1:0,1:1:3.01:71,3,0	./.	./.	1/1:8,0:13:5.96:44,6,0	0/0:3,0:13:15.02:0,15,140	0/1:3,0:5:5.29:14,0,5	1/1:34,0:29:19.27:113,19,0	1/1:6,0:6:2.98:21,3,0	1/1:7,4:11:12.04:274,12,0	1/1:4,7:11:20.94:303,21,0	0/0:5,0:10:15.01:0,15,135	1/1:2,0:3:3.01:30,3,0	1/1:2,2:4:6.02:141,6,0	1/1:8,0:8:3:27,3,0	0/0:7,0:7:12.04:0,12,186	1/1:10,11:22:24.08:565,24,0	0/1:15,0:15:6.74:7,0,193	0/1:9,4:13:28.55:280,0,29	1/1:1,4:5:12.01:192,12,0	1/1:2,1:3:3.01:71,3,0	1/1:1,0:3:3:29,3,0	1/1:1,0:4:4.39:41,4,0	0/0:1,0:3:6.01:0,6,56	1/1:4,9:13:6.02:141,6,0	1/1:2,4:6:12.04:278,12,0	1/1:7,3:9:9.03:211,9,0	1/1:19,0:19:15.05:310,15,0
chr10	58854427	.	TGCTC	T	789.51	PASS	AB=1.000;AC=14;AF=0.250;AN=56;BaseQRankSum=-1.050;DP=561;FS=4.727;HRun=0;HaplotypeScore=111.9238;InbreedingCoeff=0.0207;MQ=69.73;MQ0=6;MQRankSum=0.157;QD=3.61;ReadPosRankSum=1.400;VQSLOD=1.7519;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:78.15:0,78,1268	0/0:11,0:11:32.30:0,32,284	0/0:30,0:17:31.25:0,31,300	0/0:31,0:21:40.68:0,41,415	0/0:27,0:27:41.83:0,42,702	0/1:12,0:12:29.33:29,0,68	0/1:15,0:15:37.83:60,0,38	0/0:30,0:30:74.49:0,74,637	0/0:15,0:15:41.90:0,42,778	0/0:25,0:25:3.21:0,3,408	0/0:15,0:15:18.68:0,19,145	0/1:14,0:14:29.39:29,0,143	0/1:14,0:14:46.99:47,0,102	0/0:23,0:23:32.79:0,33,243	0/0:24,0:23:23.43:0,23,374	0/0:15,0:15:45.06:0,45,1022	0/0:16,0:16:28.43:0,28,263	1/1:0,20:20:24.08:447,24,0	0/0:10,0:9:17.86:0,18,154	0/1:23,0:23:44.57:45,0,218	0/0:18,0:18:38.56:0,39,304	1/1:11,0:11:10.90:135,11,0	0/1:13,0:13:55.17:69,0,55	0/1:20,0:20:52.99:53,0,102	0/0:22,0:22:7.86:0,8,246	0/1:23,0:22:11.19:11,0,205	0/1:30,0:30:9.89:10,0,346	0/1:24,0:24:18.60:19,0,226
chr10	58854428	.	G	GCTCTCT	2084.31	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=3.144;DP=587;FS=13.845;HRun=0;HaplotypeScore=142.9942;InbreedingCoeff=0.6893;MQ=68.33;MQ0=6;MQRankSum=-6.719;QD=11.15;ReadPosRankSum=-1.448;VQSLOD=2.0633;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:58.10:0,58,1316	0/1:14,0:14:46.22:46,0,347	0/0:30,0:17:38.44:0,38,604	0/0:31,0:21:40.44:0,40,655	0/0:27,0:27:42.10:0,42,725	1/1:11,3:15:29.74:353,30,0	1/1:8,7:16:1.98:42,2,0	0/1:34,0:34:99:448,0,847	0/0:15,0:15:42.14:0,42,869	0/0:24,0:24:69.22:0,69,1268	0/0:15,0:15:27.06:0,27,483	1/1:7,8:20:13.87:261,14,0	1/1:8,10:19:13.54:432,14,0	0/0:23,0:23:32.99:0,33,497	0/0:24,0:23:60.13:0,60,1104	0/0:15,0:15:45.12:0,45,925	0/1:19,0:18:39.77:40,0,262	0/0:20,0:20:24.03:0,24,279	0/0:8,0:7:18.02:0,18,253	0/0:23,0:23:48.11:0,48,816	0/0:18,0:18:39.10:0,39,691	1/1:13,0:13:14.83:165,15,0	1/1:13,0:14:18.03:236,18,0	1/1:9,11:23:11.43:253,11,0	0/0:22,0:22:45.04:0,45,718	0/0:22,0:21:43.68:0,44,647	0/0:30,0:30:65.68:0,66,1246	0/0:24,0:24:42.13:0,42,788
chr10	58854432	.	GCT	G	3178.76	PASS	AB=0.883;AC=26;AF=0.464;AN=56;BaseQRankSum=-0.617;DP=597;FS=9.931;HRun=0;HaplotypeScore=96.5332;InbreedingCoeff=0.6790;MQ=65.47;MQ0=6;MQRankSum=2.634;QD=10.70;ReadPosRankSum=2.594;VQSLOD=2.7842;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,1:33:16.77:0,17,600	0/0:14,0:14:5.94:0,6,42	0/0:28,0:15:0.47:0,0,1	0/0:31,1:21:6.57:0,7,54	0/1:22,4:27:1.26:1,0,357	0/0:16,0:16:18.85:0,19,140	0/0:15,0:15:8.73:0,9,61	0/0:37,0:37:32.28:0,32,377	0/1:15,2:17:33.32:33,0,401	1/1:10,16:28:37.54:487,38,0	1/1:2,11:14:21.06:240,21,0	0/0:22,0:22:23.79:0,24,194	0/0:17,0:17:11.84:0,12,92	1/1:5,18:23:0.09:185,0,0	1/1:7,17:24:30.98:445,31,0	0/0:17,0:17:7.88:0,8,543	0/0:18,0:17:9.46:0,9,98	1/1:21,0:21:1.81:60,2,0	1/1:4,1:4:8.53:61,9,0	1/1:7,11:21:29.58:282,30,0	1/1:5,13:18:24.07:274,24,0	0/0:12,0:12:5.96:0,6,45	0/0:15,0:15:19.22:0,19,162	0/0:24,0:24:0.42:0,0,97	1/1:6,15:22:35.87:362,36,0	1/1:7,11:18:16.69:200,17,0	1/1:9,19:30:42.25:440,42,0	1/1:6,19:27:29.75:302,30,0
chr10	58855806	.	G	GGTTTGTTT	2252.10	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-2.429;DP=796;FS=4.905;HRun=0;HaplotypeScore=247.6788;InbreedingCoeff=0.9835;MQ=66.42;MQ0=1;MQRankSum=-5.326;QD=31.72;ReadPosRankSum=-3.342;VQSLOD=2.4194;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:78.98:0,79,2264	1/1:1,5:7:15.05:623,15,0	0/0:28,0:22:16.65:0,17,687	0/0:30,0:28:35.16:0,35,903	0/0:28,0:28:57.20:0,57,1452	0/0:26,0:26:37.37:0,37,667	0/0:35,0:35:49.44:0,49,785	1/1:37,0:37:30.09:634,30,0	0/0:35,0:35:69.24:0,69,1693	0/0:28,0:28:60.21:0,60,1492	0/0:13,0:13:36.12:0,36,872	0/0:25,0:25:37.57:0,38,625	0/0:28,0:28:60.03:0,60,952	0/0:36,0:36:87.29:0,87,2171	0/0:33,0:33:72.23:0,72,1690	0/0:41,0:41:99:0,102,2554	1/1:10,13:27:30.09:1135,30,0	0/0:22,0:22:44.10:0,44,739	0/0:20,0:20:27.09:0,27,670	0/0:29,0:29:39.12:0,39,900	0/0:39,0:39:84.27:0,84,2023	0/0:24,0:24:42.24:0,42,725	0/0:21,0:21:51.15:0,51,907	0/0:52,0:52:99:0,114,2022	0/0:15,0:15:27.09:0,27,692	0/0:30,0:30:51.16:0,51,1200	0/0:26,0:24:53.75:0,54,1327	0/0:12,0:11:15.05:0,15,384
chr10	58855822	.	TG	T	3610.90	PASS	AB=0.603;AC=12;AF=0.214;AN=56;BaseQRankSum=17.265;DP=784;FS=11.029;HRun=1;HaplotypeScore=125.1267;InbreedingCoeff=0.5506;MQ=64.50;MQ0=1;MQRankSum=-4.501;QD=16.19;ReadPosRankSum=4.900;VQSLOD=2.9115;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,130,1912	0/0:9,0:9:23.99:0,24,231	0/0:36,0:29:68.03:0,68,1068	0/0:30,0:29:71.81:0,72,1143	0/0:28,0:28:81.24:0,81,1173	1/1:10,13:23:11.94:341,12,0	0/1:11,19:30:42.11:334,0,42	0/0:32,0:32:96.18:0,96,1354	0/0:35,0:35:99:0,102,1449	0/0:31,0:31:90.29:0,90,1336	0/0:16,0:16:48.16:0,48,720	1/1:11,12:23:3.99:342,4,0	0/1:13,19:32:18.67:487,0,19	0/0:36,0:36:99:0,108,1610	0/0:34,0:34:99:0,102,1497	0/0:39,0:39:99:0,117,1761	0/0:25,0:25:48.03:0,48,536	0/1:5,15:20:7.52:323,0,8	0/0:13,0:13:35.66:0,36,488	0/0:28,0:28:81.11:0,81,1127	0/0:39,0:39:99:0,117,1738	0/1:8,16:24:34.81:367,0,35	1/1:2,16:18:53.93:461,54,0	1/1:11,42:53:25.97:957,26,0	0/0:20,0:20:60.05:0,60,796	0/0:25,0:25:75.15:0,75,1075	0/0:29,0:27:87.22:0,87,1255	0/0:9,0:8:24.08:0,24,357
chr10	58855824	.	TTTG	T	4699.49	PASS	AB=0.614;AC=13;AF=0.232;AN=56;BaseQRankSum=17.179;DP=780;FS=10.587;HRun=0;HaplotypeScore=152.4332;InbreedingCoeff=0.6712;MQ=66.24;MQ0=1;MQRankSum=-4.746;QD=21.17;ReadPosRankSum=5.281;VQSLOD=4.2449;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,129,2744	0/0:9,0:9:24.08:0,24,348	0/0:38,0:31:77.73:0,78,1284	0/0:30,0:29:61.02:0,61,1307	0/0:27,0:27:75.25:0,75,1550	1/1:9,13:22:18:434,18,0	0/1:11,19:30:23.24:461,0,23	0/0:32,0:32:93.30:0,93,1746	0/0:32,0:32:90.31:0,90,1958	0/0:32,0:32:90.30:0,90,1915	0/0:16,0:16:48.16:0,48,995	1/1:11,12:23:12.40:449,12,0	0/1:12,19:31:10.27:615,0,10	0/0:38,0:38:99:0,108,2270	0/0:35,0:35:99:0,105,2146	0/0:39,0:39:99:0,117,2562	0/0:23,0:23:45.06:0,45,686	1/1:5,15:20:4.63:445,5,0	0/0:12,0:12:30.10:0,30,683	0/0:29,0:29:84.27:0,84,1530	0/0:39,0:39:99:0,108,2234	0/1:9,16:25:27.89:434,0,28	1/1:2,16:18:51.14:573,51,0	1/1:11,42:53:47.56:1288,48,0	0/0:18,0:18:51.17:0,51,930	0/0:25,0:25:69.23:0,69,1441	0/0:30,0:28:90.30:0,90,1754	0/0:9,0:8:24.08:0,24,486
chr10	58856059	.	A	AGGAG	3908.31	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=5.317;DP=632;FS=15.832;HRun=0;HaplotypeScore=132.7383;InbreedingCoeff=0.9666;MQ=63.49;MQ0=6;MQRankSum=-3.298;QD=24.89;ReadPosRankSum=-1.891;VQSLOD=2.3910;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:52.67:0,53,815	0/0:11,0:11:18.01:0,18,274	0/0:32,0:17:17.89:0,18,215	0/0:41,0:29:24.32:0,24,282	0/0:15,0:15:36.10:0,36,558	1/1:3,11:14:6:216,6,0	1/1:15,0:15:15.05:256,15,0	0/0:18,0:17:33.06:0,33,478	0/0:26,0:26:60.19:0,60,956	0/0:33,0:33:81.22:0,81,1275	0/0:18,0:18:36.07:0,36,532	1/1:27,0:27:32.97:777,33,0	1/1:24,0:24:52.87:721,53,0	0/0:27,0:27:54.17:0,54,880	0/0:36,0:36:90.21:0,90,1381	0/0:26,0:26:66.22:0,66,1079	0/0:32,0:32:72.95:0,73,1379	1/1:14,0:14:22.10:343,22,0	0/0:20,0:19:29.87:0,30,419	0/0:22,0:22:63.13:0,63,972	0/0:16,0:15:35.02:0,35,445	1/1:25,0:25:29.14:715,29,0	1/1:13,0:12:26.80:385,27,0	1/1:23,1:25:11.28:495,11,0	0/0:19,0:19:54.18:0,54,891	0/0:19,0:19:57.19:0,57,936	0/0:30,0:30:84.23:0,84,1296	0/0:8,0:8:15.05:0,15,257
chr10	58856134	.	AAG	A	438.13	PASS	AB=1.000;AC=15;AF=0.300;AN=50;BaseQRankSum=0.643;DP=442;FS=3.664;HRun=0;HaplotypeScore=110.7683;InbreedingCoeff=0.1642;MQ=42.86;MQ0=22;MQRankSum=-1.789;QD=2.42;ReadPosRankSum=0.861;VQSLOD=2.0411;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:15,3:16:3.59:182,4,0	./.	./.	./.	1/1:10,14:23:9.95:248,10,0	0/0:8,0:7:5.99:0,6,53	0/0:7,0:6:5.75:0,6,43	0/0:20,0:15:8.94:0,9,67	1/1:4,0:12:11.36:56,11,0	0/0:28,0:28:46.91:0,47,397	1/1:8,0:7:0.47:1,0,0	0/0:9,0:9:2.80:0,3,13	0/1:11,0:11:18.83:19,0,51	0/0:18,0:17:0.85:0,1,45	0/1:14,0:15:6.81:7,0,25	0/0:4,0:14:1.84:0,2,24	0/1:27,0:38:3.96:4,0,59	0/1:5,0:5:0:0,0,0	0/0:17,0:14:9.51:0,10,124	0/1:15,0:15:17.05:17,0,31	0/0:10,0:8:5.99:0,6,48	0/0:12,0:12:5.85:0,6,42	0/1:12,0:10:34.04:34,0,50	0/0:9,0:9:8.84:0,9,62	0/1:20,0:19:6.43:6,0,20	0/0:21,0:21:23.86:0,24,279	0/0:22,0:22:14.84:0,15,121	0/0:10,0:8:7.87:0,8,101
chr10	58856136	.	G	GAA	3846.87	PASS	AB=0.973;AC=33;AF=0.589;AN=56;BaseQRankSum=-0.716;DP=441;FS=1.572;HRun=3;HaplotypeScore=98.1007;InbreedingCoeff=-0.1324;MQ=42.76;MQ0=23;MQRankSum=0.916;QD=10.26;ReadPosRankSum=1.465;VQSLOD=0.4872;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,1:17:5.37:0,5,174	1/1:9,0:8:2.86:20,3,0	0/0:21,0:8:23.93:0,24,199	0/1:30,0:5:1.80:2,0,48	0/1:26,0:24:80.65:81,0,215	1/1:6,1:6:11.86:80,12,0	0/1:6,0:5:11.76:12,0,15	0/1:21,0:16:4.99:257,0,5	0/0:12,0:12:20.74:0,21,154	0/1:27,0:27:99:352,0,134	1/1:7,0:6:9.47:80,9,0	0/1:8,0:8:26.39:30,0,26	1/1:6,5:11:15.33:282,15,0	0/1:18,0:17:15.67:266,0,16	1/1:14,0:14:7.80:232,8,0	0/0:14,0:14:2.90:0,3,66	1/1:39,1:38:1.58:460,2,0	0/1:4,0:4:17.28:33,0,17	0/1:17,0:14:50.29:207,0,50	1/1:17,0:17:10.36:209,10,0	0/1:10,0:8:12.15:49,0,12	0/1:11,0:11:2.58:75,0,3	1/1:10,2:10:14.63:121,15,0	0/1:8,1:9:6.19:114,0,6	1/1:20,0:19:31.51:252,32,0	0/1:21,0:21:95.29:186,0,95	0/1:19,0:19:48.11:255,0,48	0/1:6,5:9:19.53:195,0,20
chr10	58856264	.	A	AT	330.84	PASS	AB=0.954;AC=13;AF=0.232;AN=56;BaseQRankSum=6.172;DP=475;FS=16.151;HRun=0;HaplotypeScore=91.4664;InbreedingCoeff=0.1340;MQ=49.46;MQ0=23;MQRankSum=-9.253;QD=1.96;ReadPosRankSum=3.556;VQSLOD=1.1026;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:28,4:31:93.16:93,0,707	0/1:10,1:11:22.24:22,0,271	0/0:13,0:2:5.98:0,6,62	0/0:15,0:4:11.98:0,12,128	0/0:28,0:28:34.08:0,34,578	0/1:10,0:10:16.09:16,0,25	1/1:15,0:12:20.02:71,20,0	0/0:27,0:21:57.08:0,57,712	0/0:18,0:16:42.14:0,42,586	0/0:17,0:17:45.59:0,46,632	0/0:23,0:23:57.05:0,57,744	0/1:12,0:11:5.80:23,0,6	0/1:5,0:4:1.86:2,0,18	0/0:9,0:9:9.03:0,9,126	0/0:26,0:24:36.54:0,37,479	0/0:16,0:15:33.06:0,33,439	0/1:25,6:30:99:160,0,715	0/1:8,0:6:0.25:0,0,28	0/0:15,0:13:39.13:0,39,574	0/0:23,0:23:60.63:0,61,852	0/0:7,0:7:11.94:0,12,123	0/1:14,0:13:24.73:25,0,60	0/1:11,0:11:27.75:28,0,55	1/1:17,0:14:11.41:44,11,0	0/0:18,0:18:21.02:0,21,271	0/0:18,0:18:51.13:0,51,723	0/0:25,0:25:39.04:0,39,476	0/0:7,0:6:6.02:0,6,84
chr10	58856265	.	A	AC	1974.06	PASS	AB=0.832;AC=20;AF=0.357;AN=56;BaseQRankSum=5.103;DP=482;FS=55.839;HRun=0;HaplotypeScore=89.2764;InbreedingCoeff=0.5725;MQ=49.40;MQ0=22;MQRankSum=-7.572;QD=10.18;ReadPosRankSum=-2.642;VQSLOD=1.4573;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:26,8:33:99:160,0,674	0/1:9,2:11:76.57:77,0,239	0/0:13,0:2:5.97:0,6,60	0/0:15,0:4:11.99:0,12,130	0/1:19,9:28:99:269,0,484	1/1:3,7:11:19.67:226,20,0	1/1:3,11:12:4.20:298,4,0	0/0:29,0:22:37.97:0,38,627	0/0:18,0:16:42.14:0,42,586	0/0:17,0:17:34.24:0,34,549	0/0:23,0:23:30.65:0,31,631	1/1:2,8:11:23.82:266,24,0	1/1:2,3:4:6.90:81,7,0	0/0:9,0:9:9:0,9,106	0/1:24,2:24:5.66:6,0,321	0/0:15,1:15:38.74:0,39,471	0/0:33,0:30:3.80:0,4,696	1/1:5,4:7:10.54:116,11,0	0/0:16,0:14:10.62:0,11,508	0/0:23,0:23:39.53:0,40,775	0/0:8,0:8:12.72:0,13,92	1/1:3,10:12:19.26:250,19,0	1/1:3,9:12:20.78:250,21,0	1/1:3,7:15:14.17:169,14,0	0/0:18,0:18:8.13:0,8,169	0/0:18,0:18:37.11:0,37,690	0/0:25,0:25:39.03:0,39,461	0/0:7,0:6:5.51:0,6,51
chr10	58856277	.	G	GAAAC	8324.96	PASS	AB=1.000;AC=35;AF=0.625;AN=56;BaseQRankSum=-6.533;DP=509;FS=1.497;HRun=0;HaplotypeScore=101.6771;InbreedingCoeff=0.0471;MQ=52.05;MQ0=16;MQRankSum=5.525;QD=19.27;ReadPosRankSum=1.890;VQSLOD=4.2019;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:38,0:35:99:162,0,237	0/1:11,0:11:60.79:61,0,135	0/1:12,0:2:0.85:1,0,17	0/0:13,0:4:6:0,6,55	0/1:29,0:29:56.15:166,0,56	0/1:14,0:14:78.29:78,0,116	0/0:15,0:14:23.77:0,24,183	0/0:33,0:28:49.52:0,50,410	0/0:16,0:15:39.02:0,39,579	1/1:2,19:22:57.14:1172,57,0	1/1:1,22:23:57.10:1021,57,0	0/1:13,0:12:57.20:83,0,57	0/1:6,0:5:29.37:62,0,29	1/1:1,14:15:9.03:243,9,0	1/1:6,18:22:31.37:758,31,0	0/1:14,0:14:26.27:26,0,315	0/1:34,0:32:99:136,0,308	0/1:10,0:9:5.29:101,0,5	1/1:2,16:16:36.09:657,36,0	1/1:1,22:23:60.01:1024,60,0	1/1:1,8:9:9.03:213,9,0	0/1:12,0:11:37.90:54,0,38	0/1:10,0:10:88.53:103,0,89	0/1:15,0:14:2.30:2,0,97	1/1:1,23:24:21.07:565,21,0	1/1:2,17:21:54.04:1003,54,0	1/1:1,21:25:21.07:554,21,0	1/1:1,8:8:3.01:81,3,0
chr10	58856965	.	GA	G	4997.17	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=8.539;DP=625;FS=3.599;HRun=4;HaplotypeScore=70.3516;InbreedingCoeff=0.9944;MQ=83.27;MQ0=0;MQRankSum=-1.025;QD=31.63;ReadPosRankSum=2.142;VQSLOD=5.6089;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:90.27:0,90,1240	0/0:13,0:13:36.12:0,36,504	0/0:27,0:27:66.10:0,66,828	0/0:23,0:23:40.69:0,41,682	0/0:17,0:17:39.13:0,39,546	1/1:0,17:17:45.14:540,45,0	1/1:4,17:21:48.15:576,48,0	0/0:28,0:28:75.24:0,75,1033	0/0:26,0:26:75.24:0,75,1030	0/0:25,0:25:69.22:0,69,952	0/0:16,0:16:48.12:0,48,646	1/1:3,33:36:96.29:1150,96,0	1/1:1,30:31:81.11:969,81,0	0/0:19,0:19:54.16:0,54,722	0/0:35,0:35:99:0,105,1450	0/0:26,0:26:75.25:0,75,1050	0/0:29,0:29:84.28:0,84,1173	1/1:1,17:18:48.15:576,48,0	0/0:17,0:17:48.13:0,48,649	0/0:11,0:11:24.04:0,24,314	0/0:38,0:38:99:0,105,1450	1/1:0,12:12:36.11:430,36,0	1/1:0,5:5:12.04:144,12,0	1/1:1,17:18:51.16:612,51,0	0/0:20,0:20:54.17:0,54,740	0/0:23,0:23:69.23:0,69,966	0/0:27,0:26:78.26:0,78,1092	0/0:16,0:16:48.16:0,48,672
chr10	58857259	.	ATTGTTG	A	9335.35	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=0.542;DP=845;FS=3.002;HRun=0;HaplotypeScore=195.8574;InbreedingCoeff=0.9902;MQ=56.35;MQ0=2;MQRankSum=-9.794;QD=31.22;ReadPosRankSum=-1.599;VQSLOD=4.5840;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:90.22:0,90,2714	0/0:4,0:16:40.36:0,40,853	0/0:27,0:23:36.12:0,36,1035	0/0:31,0:28:51.17:0,51,1414	0/0:23,0:23:45.15:0,45,1349	0/0:3,0:18:27.09:0,27,712	0/0:14,0:44:78.27:0,78,2014	0/0:40,0:40:75.21:0,75,1438	0/0:32,0:32:66.23:0,66,2099	1/1:8,29:37:78.25:1571,78,0	1/1:10,15:25:42.14:825,42,0	0/0:15,0:35:59.86:0,60,1576	0/0:6,0:32:45.46:0,45,1299	1/1:12,24:36:54.18:1086,54,0	1/1:5,25:30:36.12:764,36,0	0/0:42,0:42:99:0,99,2986	0/0:9,0:45:78.25:0,78,2028	0/0:10,0:23:12.04:0,12,337	1/1:11,8:18:24.05:460,24,0	1/1:5,25:30:59.69:902,60,0	1/1:5,16:21:24.08:501,24,0	0/0:10,0:37:83.99:0,84,1846	0/0:14,0:26:26.12:0,26,669	0/0:10,0:39:66.65:0,67,1598	1/1:11,13:24:30.10:635,30,0	1/1:12,21:34:63.17:1214,63,0	1/1:9,21:31:54.18:1124,54,0	1/1:3,8:11:12.04:253,12,0
chr10	58857423	.	G	GC	7842.55	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-17.596;DP=800;FS=3.494;HRun=3;HaplotypeScore=73.3307;InbreedingCoeff=1.0000;MQ=82.24;MQ0=0;MQRankSum=-0.171;QD=37.17;ReadPosRankSum=3.215;VQSLOD=5.5314;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,117,1389	0/0:12,0:12:36.11:0,36,431	0/0:25,0:25:69.18:0,69,795	0/0:26,0:26:51.55:0,52,721	0/0:28,0:28:84.26:0,84,1005	1/1:1,24:25:75.25:1040,75,0	1/1:2,30:32:81.27:1134,81,0	0/0:28,0:28:75.20:0,75,872	0/0:26,0:26:75.22:0,75,888	0/0:35,0:35:99:0,105,1257	0/0:23,0:23:69.20:0,69,816	1/1:1,21:22:60.20:840,60,0	1/1:1,28:29:72.24:1008,72,0	0/0:31,0:31:84.22:0,84,981	0/0:44,0:44:99:0,129,1501	0/0:35,0:35:99:0,105,1247	0/0:35,0:35:99:0,99,1186	1/1:1,21:22:54.18:756,54,0	0/0:20,0:20:57.17:0,57,684	0/0:29,0:29:81.23:0,81,960	0/0:41,0:41:99:0,114,1356	1/1:1,20:21:57.19:797,57,0	1/1:0,33:33:90.30:1259,90,0	1/1:0,27:27:72.24:1008,72,0	0/0:24,0:23:69.20:0,69,816	0/0:26,0:26:60.17:0,60,708	0/0:31,0:30:84.26:0,84,1006	0/0:26,0:26:78.19:0,78,900
chr10	58858181	.	T	TA	5026.40	PASS	AB=0.941;AC=29;AF=0.518;AN=56;BaseQRankSum=-13.574;DP=722;FS=11.120;HRun=13;HaplotypeScore=95.5872;InbreedingCoeff=0.8785;MQ=72.57;MQ0=2;MQRankSum=-0.284;QD=13.92;ReadPosRankSum=-4.001;VQSLOD=2.8523;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,4:46:7.46:0,7,614	1/1:3,2:5:5.93:44,6,0	0/0:20,0:17:26.57:0,27,177	0/1:15,1:15:5.05:5,0,48	0/0:27,0:27:50.44:0,50,348	0/0:5,0:28:41.65:0,42,132	0/0:7,0:26:34.56:0,35,100	1/1:7,21:28:32.40:437,32,0	0/0:29,3:32:31.43:0,31,356	1/1:8,17:26:36.24:456,36,0	1/1:6,13:20:33.18:267,33,0	0/0:7,0:36:42.72:0,43,123	0/0:5,0:23:26.44:0,26,77	1/1:7,17:24:33.02:301,33,0	1/1:3,18:20:39.03:359,39,0	0/0:26,0:26:56.43:0,56,390	1/1:9,31:40:18.90:457,19,0	0/0:5,0:26:38.69:0,39,112	1/1:6,16:24:21.71:409,22,0	1/1:10,13:23:12.85:248,13,0	1/1:7,13:23:35.55:294,36,0	0/0:4,0:23:36.26:0,36,110	0/0:4,0:11:12.19:0,12,35	0/0:4,0:36:54.95:0,55,159	1/1:5,20:26:1.16:426,1,0	1/1:10,26:38:18:543,18,0	1/1:5,22:28:47.89:432,48,0	1/1:2,16:19:38.88:349,39,0
chr10	58860605	.	CGGG	C	4149.04	PASS	AB=0.850;AC=19;AF=0.339;AN=56;BaseQRankSum=-5.652;DP=408;FS=0.000;HRun=11;HaplotypeScore=82.1650;InbreedingCoeff=0.7470;MQ=74.60;MQ0=2;MQRankSum=-0.790;QD=21.72;ReadPosRankSum=7.084;VQSLOD=1.6394;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:27.04:0,27,402	0/0:0,0:6:2.49:0,2,5	0/1:14,0:12:0.90:1,0,229	0/0:20,0:18:0.45:0,0,143	1/1:4,0:4:0.20:1,0,0	1/1:0,9:9:21.07:271,21,0	1/1:5,27:32:66.19:866,66,0	0/0:10,0:17:5.10:0,5,36	0/0:9,0:9:21.05:0,21,345	0/0:2,0:3:4.36:0,4,39	0/0:2,0:7:7.34:0,7,78	1/1:7,22:29:45.10:590,45,0	1/1:0,18:18:45.15:589,45,0	0/0:16,0:17:40.51:0,41,418	0/0:12,0:15:34.29:0,34,433	0/0:9,0:9:18.06:0,18,332	0/0:4,0:31:30.31:0,30,67	1/1:3,30:33:72.21:946,72,0	0/0:12,0:14:26.25:0,26,216	0/0:5,0:5:8.99:0,9,102	0/0:12,0:15:23.93:0,24,188	1/1:3,9:12:4.08:182,4,0	1/1:2,11:13:26.72:353,27,0	1/1:5,18:24:25.60:351,26,0	0/0:11,0:13:20.34:0,20,198	0/0:11,0:12:21.42:0,21,189	0/0:5,0:8:9:0,9,107	0/0:2,0:2:3:0,3,25
chr10	58860615	.	GGA	G	274	PASS	AB=0.964;AC=5;AF=0.089;AN=56;BaseQRankSum=0.731;DP=419;FS=61.106;HRun=0;HaplotypeScore=92.2296;InbreedingCoeff=0.2272;MQ=76.82;MQ0=2;MQRankSum=-1.145;QD=3.91;ReadPosRankSum=3.574;VQSLOD=-0.6540;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:46.37:0,46,457	0/1:6,0:6:16.95:24,0,17	0/0:17,0:13:6.98:0,7,219	0/1:18,0:17:5.97:6,0,188	0/0:5,0:5:5.10:0,5,48	0/0:12,0:12:11.76:0,12,104	0/0:31,0:31:50.64:0,51,237	0/1:15,1:16:60.65:61,0,155	0/0:10,0:10:26.63:0,27,323	0/0:4,0:4:11.89:0,12,108	0/0:8,0:8:13.26:0,13,100	0/0:24,0:24:27.05:0,27,149	0/0:20,0:20:16.71:0,17,115	0/0:18,0:18:37.33:0,37,385	0/0:15,0:15:19.18:0,19,366	0/0:9,0:9:27.03:0,27,302	1/1:27,2:29:61.83:301,62,0	0/0:33,0:33:57:0,57,264	0/0:15,0:15:25.47:0,25,219	0/0:5,0:5:11.92:0,12,128	0/0:17,1:18:16.76:0,17,341	0/0:13,0:13:1.27:0,1,95	0/0:14,0:14:20.02:0,20,114	0/0:22,0:22:11.43:0,11,109	0/0:13,0:13:4.09:0,4,155	0/0:15,0:15:19.11:0,19,212	0/0:8,0:8:14.81:0,15,146	0/0:3,0:3:8.94:0,9,65
chr10	58861094	.	CA	C	8302.65	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=15.627;DP=736;FS=0.301;HRun=1;HaplotypeScore=71.9547;InbreedingCoeff=0.9993;MQ=87.85;MQ0=0;MQRankSum=-7.504;QD=38.98;ReadPosRankSum=3.410;VQSLOD=5.4947;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:55:99:0,166,2582	0/0:7,0:7:21.07:0,21,335	0/0:24,0:24:69.23:0,69,1091	0/0:28,0:28:81.04:0,81,1198	0/0:25,0:25:75.26:0,75,1196	1/1:0,22:22:57.19:796,57,0	1/1:0,35:35:93.18:1301,93,0	0/0:33,0:33:96.33:0,96,1506	0/0:19,0:19:54.17:0,54,831	0/0:22,0:22:66.22:0,66,1034	0/0:14,0:14:42.14:0,42,658	1/1:1,31:32:90.26:1235,90,0	1/1:1,24:25:69.23:957,69,0	0/0:34,0:34:99:0,99,1563	0/0:33,0:33:96.31:0,96,1486	0/0:29,0:29:87.30:0,87,1379	0/0:24,0:24:69.21:0,69,1078	1/1:0,26:26:72.24:1007,72,0	0/0:22,0:22:66.23:0,66,1053	0/0:24,0:24:69.23:0,69,1083	0/0:45,0:45:99:0,132,2028	1/1:0,27:27:81.27:1133,81,0	1/1:1,14:15:45.14:615,45,0	1/1:0,31:31:90.30:1259,90,0	0/0:20,0:20:60.19:0,60,928	0/0:29,0:29:84.28:0,84,1298	0/0:18,0:17:54.18:0,54,863	0/0:17,0:17:51.17:0,51,812
chr10	58864876	.	TGTGTGTGC	T	3062.18	PASS	AB=1.000;AC=33;AF=0.589;AN=56;BaseQRankSum=3.967;DP=556;FS=26.298;HRun=0;HaplotypeScore=147.4932;InbreedingCoeff=0.0365;MQ=57.63;MQ0=13;MQRankSum=1.090;QD=6.77;ReadPosRankSum=0.816;VQSLOD=1.0580;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:36:85.28:0,85,960	1/1:2,6:7:3.01:72,3,0	0/0:5,0:3:3.76:0,4,17	0/0:12,0:5:0.91:0,1,3	0/1:12,0:12:1.94:2,0,84	0/1:13,0:12:28.59:29,0,266	0/1:36,0:36:99:100,0,642	1/1:15,0:14:17.60:144,18,0	0/0:17,0:17:30.34:0,30,429	1/1:18,0:16:35.22:275,35,0	1/1:7,0:7:5.99:49,6,0	0/1:20,0:20:44.07:44,0,489	0/1:18,0:17:32.32:32,0,303	1/1:31,0:29:4.99:54,5,0	0/1:20,0:20:18.85:19,0,41	0/0:14,0:14:30.91:0,31,770	1/1:1,30:31:8.61:259,9,0	0/1:20,0:19:64.76:251,0,65	1/1:12,0:11:5.64:206,6,0	1/1:7,0:7:8.81:60,9,0	1/1:75,0:74:99:1095,113,0	0/1:10,0:10:13.83:14,0,39	0/1:10,0:9:16.07:39,0,16	0/1:35,0:33:37.77:135,0,38	0/0:19,0:19:3.85:0,4,22	0/1:24,0:23:27.94:250,0,28	1/1:12,0:12:2.49:24,2,0	1/1:17,0:17:9:78,9,0
chr10	58864878	.	TGTGTGC	T	4253.98	PASS	AB=1.000;AC=35;AF=0.625;AN=56;BaseQRankSum=1.864;DP=539;FS=16.119;HRun=0;HaplotypeScore=130.3930;InbreedingCoeff=0.1732;MQ=59.08;MQ0=12;MQRankSum=0.420;QD=9.73;ReadPosRankSum=0.067;VQSLOD=2.9685;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:36:20.59:0,21,555	1/1:8,0:7:3.01:40,3,0	0/0:5,0:3:3.76:0,4,17	0/0:11,0:5:0:0,0,0	0/1:11,0:11:1.94:2,0,58	0/1:13,0:12:53.10:53,0,163	0/1:35,0:35:99:152,0,344	1/1:13,0:12:14.80:113,15,0	0/0:17,0:17:29.85:0,30,317	1/1:4,14:16:38.75:406,39,0	1/1:6,0:6:5.99:49,6,0	0/1:20,0:20:65.80:66,0,311	0/1:19,0:18:54.40:54,0,190	1/1:6,23:28:5.34:144,5,0	1/1:4,14:18:2.59:72,3,0	0/0:14,0:14:27.91:0,28,548	1/1:31,0:31:8.61:160,9,0	0/1:18,0:18:1.21:259,0,1	1/1:2,10:11:23.87:220,24,0	1/1:7,0:7:9.02:107,9,0	1/1:77,0:75:99:1537,147,0	0/1:11,0:11:14.23:14,0,18	0/1:10,0:9:5.29:39,0,5	0/1:34,0:32:19.35:156,0,19	0/0:1,17:18:0.47:0,0,1	1/1:4,15:18:39:383,39,0	1/1:1,9:10:2.69:68,3,0	1/1:2,16:18:8.99:160,9,0
chr10	58865168	.	G	GAC	4169.65	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-2.561;DP=525;FS=1.845;HRun=0;HaplotypeScore=101.4653;InbreedingCoeff=0.9447;MQ=74.68;MQ0=19;MQRankSum=-1.819;QD=23.83;ReadPosRankSum=2.730;VQSLOD=4.4009;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:62.53:0,63,497	0/0:6,0:6:0.21:0,0,65	0/0:54,0:19:43.08:0,43,395	0/0:78,0:28:24.82:0,25,403	0/0:16,0:16:26.05:0,26,217	0/0:12,0:12:11.17:0,11,116	0/0:17,0:17:42:0,42,421	0/0:23,0:22:64.23:0,64,583	0/0:12,0:12:32.94:0,33,318	1/1:14,0:14:39.01:389,39,0	1/1:9,0:9:26.88:245,27,0	0/0:12,0:12:20.95:0,21,171	0/0:13,0:12:23.93:0,24,220	1/1:7,3:10:26.79:303,27,0	1/1:21,2:23:51:524,51,0	0/0:13,0:14:39.04:0,39,389	0/0:18,0:18:31.07:0,31,264	0/0:10,0:10:23.23:0,23,163	1/1:11,1:12:34.37:309,34,0	1/1:15,0:15:25.62:266,26,0	1/1:16,0:16:24.38:192,24,0	0/0:14,0:14:36:0,36,355	0/0:9,0:9:7.99:0,8,69	0/0:15,0:15:18.03:0,18,146	1/1:13,3:16:32.89:295,33,0	1/1:13,2:15:45.06:550,45,0	1/1:19,3:23:63.17:608,63,0	1/1:21,0:21:54.68:489,55,0
chr10	58865169	.	ACTCTCT	A	149.08	PASS	AC=2;AF=0.038;AN=52;BaseQRankSum=-0.672;DP=559;FS=0.000;HRun=0;HaplotypeScore=148.1532;InbreedingCoeff=0.3635;MQ=72.60;MQ0=20;MQRankSum=-2.339;QD=5.52;ReadPosRankSum=-0.914;VQSLOD=2.4047;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:19,5:26:13.81:235,14,0	0/0:6,0:6:6.01:0,6,103	0/0:54,0:19:0.47:0,0,1	0/0:78,0:28:2.28:0,2,12	./.	0/0:11,0:11:5.56:0,6,140	0/0:19,0:19:11.98:0,12,260	0/0:29,0:28:14.24:0,14,208	0/0:12,0:12:18.03:0,18,325	0/0:19,0:18:19.62:0,20,397	0/0:10,0:10:6.02:0,6,136	0/0:12,0:12:6.01:0,6,76	0/0:14,0:13:11.96:0,12,203	0/0:10,0:10:14.84:0,15,345	0/0:24,0:26:18.02:0,18,411	0/0:15,0:15:0.74:0,1,138	0/0:21,0:21:27.96:0,28,582	./.	0/0:13,0:13:15.04:0,15,299	0/0:15,0:15:3.48:0,3,74	0/0:17,0:16:2.99:0,3,24	0/0:14,0:14:9.03:0,9,202	0/0:11,0:11:6.91:0,7,136	0/0:16,0:16:12.02:0,12,262	0/0:18,0:18:8.95:0,9,188	0/0:19,0:18:36.10:0,36,757	0/0:24,0:25:30.09:0,30,601	0/0:21,0:22:15.01:0,15,256
chr10	58865209	.	TCTC	T	791.14	PASS	AB=0.968;AC=12;AF=0.240;AN=50;BaseQRankSum=-1.371;DP=364;FS=2.154;HRun=0;HaplotypeScore=108.8223;InbreedingCoeff=-0.1398;MQ=38.52;MQ0=32;MQRankSum=-1.667;QD=5.01;ReadPosRankSum=2.448;VQSLOD=2.4065;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:25:20.74:21,0,147	0/0:4,0:4:9.02:0,9,97	./.	./.	0/0:16,0:16:9.49:0,9,99	0/1:10,0:10:27.99:28,0,31	0/1:19,0:19:30.59:31,0,61	0/0:17,0:15:26.72:0,27,244	0/1:13,0:12:1.68:2,0,165	0/1:16,0:15:69.44:134,0,69	0/0:10,0:9:7.69:0,8,49	./.	0/1:7,3:9:26.99:81,0,27	0/1:9,1:10:8.70:9,0,119	0/0:18,0:16:18.58:0,19,147	1/1:12,3:15:32.87:394,33,0	0/0:21,0:20:39.54:0,40,453	0/0:17,0:17:3.87:0,4,176	0/1:7,0:7:33.90:34,0,75	0/0:9,0:9:10.67:0,11,54	0/0:13,0:9:3.60:0,4,13	0/0:6,0:5:8.34:0,8,44	0/0:9,0:9:9.77:0,10,66	0/0:13,0:12:7.53:0,8,87	0/0:15,0:15:8.48:0,8,61	0/1:23,0:20:99:164,0,178	0/0:13,0:12:23.95:0,24,193	0/1:9,0:6:37.64:38,0,89
chr10	58865210	.	CT	C	432.86	PASS	AB=0.979;AC=15;AF=0.288;AN=52;BaseQRankSum=0.831;DP=364;FS=3.861;HRun=1;HaplotypeScore=104.2162;InbreedingCoeff=0.0292;MQ=38.61;MQ0=30;MQRankSum=-1.845;QD=2.67;ReadPosRankSum=0.899;VQSLOD=-0.2393;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:24:11.29:11,0,111	0/0:4,0:4:8.95:0,9,71	./.	./.	0/0:16,0:16:9:0,9,77	0/1:10,0:10:12.13:18,0,12	0/1:17,2:19:0.90:49,0,1	0/0:15,2:16:26.76:0,27,211	0/1:13,0:12:16.94:17,0,91	0/1:15,0:15:66.62:67,0,67	0/0:9,1:9:3.25:0,3,30	1/1:4,0:4:0.47:1,0,0	0/1:9,1:9:26.86:72,0,27	0/0:10,0:10:4.49:0,4,78	0/0:18,0:16:13.55:0,14,94	1/1:13,2:15:32.50:217,32,0	0/0:23,0:21:39.19:0,39,343	0/0:17,1:18:3.59:0,4,119	0/0:7,0:7:6.89:0,7,80	0/0:8,1:9:6.51:0,7,36	0/0:13,0:9:1.68:0,2,5	1/1:6,0:5:4.97:20,5,0	0/0:9,0:9:8.92:0,9,51	0/1:13,0:12:14.36:14,0,50	0/0:15,0:15:5.51:0,6,34	0/1:23,0:20:85.33:85,0,152	0/0:13,0:12:20.54:0,21,151	0/1:9,0:6:6.60:7,0,41
chr10	58865211	.	TC	T	1045.03	PASS	AB=0.694;AC=23;AF=0.426;AN=54;BaseQRankSum=-0.426;DP=364;FS=18.883;HRun=9;HaplotypeScore=97.7718;InbreedingCoeff=0.4809;MQ=38.60;MQ0=29;MQRankSum=-0.735;QD=6.41;ReadPosRankSum=5.601;VQSLOD=0.2132;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:25:32.66:0,33,219	0/0:4,0:4:7.26:0,7,70	./.	0/0:13,0:1:3:0,3,25	0/0:16,0:16:9.02:0,9,99	1/1:5,5:10:7.36:66,7,0	1/1:5,13:19:9.30:148,9,0	0/0:17,0:15:20.73:0,21,165	0/0:12,0:11:18.91:0,19,129	1/1:12,3:15:28.79:200,29,0	0/1:2,8:10:4:23,0,4	0/1:0,4:4:0:0,0,0	1/1:9,1:9:8.81:62,9,0	1/1:7,2:10:2.17:28,2,0	0/0:13,6:17:3.66:0,4,16	1/1:13,2:15:26.20:166,26,0	0/0:22,0:20:26.54:0,27,260	0/0:18,0:18:4.11:0,4,177	1/1:5,1:7:11.58:81,12,0	0/0:2,7:9:6.26:0,6,17	0/0:12,1:9:1.76:0,2,6	1/1:0,6:5:9:82,9,0	0/0:7,1:9:3.45:0,3,9	0/1:8,3:11:10.40:23,0,10	0/0:12,2:14:1.71:0,2,9	1/1:17,6:20:34.67:267,35,0	0/1:11,2:12:6.79:28,0,7	0/1:5,3:6:8.47:45,0,8
chr10	58865212	.	C	CT	1969.91	PASS	AB=0.913;AC=33;AF=0.611;AN=54;BaseQRankSum=2.321;DP=364;FS=8.767;HRun=1;HaplotypeScore=99.6383;InbreedingCoeff=0.3508;MQ=38.44;MQ0=30;MQRankSum=-1.381;QD=8.01;ReadPosRankSum=0.984;VQSLOD=0.3434;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:25:36.55:0,37,281	0/1:3,0:4:28.86:29,0,59	./.	0/0:14,0:1:3:0,3,25	0/0:16,0:16:9.02:0,9,99	1/1:11,0:11:1.10:33,1,0	0/1:19,0:19:10.64:41,0,11	0/0:17,0:15:20.32:0,20,162	0/0:12,0:11:22.53:0,23,195	1/1:5,9:14:36.85:360,37,0	1/1:10,0:9:10.71:72,11,0	0/1:4,0:4:0:0,0,0	0/1:9,0:8:20.57:21,0,26	1/1:6,0:9:17.59:150,18,0	1/1:14,7:20:15.66:139,16,0	0/1:15,0:15:25.04:60,0,25	0/1:19,0:18:75.34:75,0,199	0/0:18,0:18:4.25:0,4,184	1/1:3,2:5:15.01:148,15,0	1/1:11,0:11:8.68:47,9,0	1/1:6,5:8:2.60:10,3,0	0/0:6,0:5:5.45:0,5,15	1/1:3,0:9:7.18:47,7,0	1/1:10,2:11:6.77:69,7,0	0/1:6,5:14:1.16:44,0,1	1/1:12,11:20:53.93:484,54,0	1/1:9,1:12:6.17:210,6,0	1/1:9,0:6:14.56:104,15,0
chr10	58865219	.	C	CT	1174.55	PASS	AB=0.947;AC=34;AF=0.630;AN=54;BaseQRankSum=3.337;DP=386;FS=7.811;HRun=0;HaplotypeScore=98.6243;InbreedingCoeff=0.3116;MQ=38.15;MQ0=34;MQRankSum=-3.242;QD=4.40;ReadPosRankSum=1.143;VQSLOD=2.9191;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:23:23.30:0,23,357	0/0:6,0:6:14.73:0,15,135	./.	0/0:18,0:4:12.01:0,12,117	0/0:20,0:20:14.77:0,15,161	1/1:9,0:8:7.30:47,7,0	1/1:17,1:18:8.42:34,8,0	0/1:18,0:16:12.40:12,0,168	0/0:13,0:12:21.89:0,22,179	1/1:17,0:17:9.46:232,9,0	1/1:11,0:10:11.48:45,11,0	1/1:5,0:5:2.37:8,2,0	1/1:6,1:6:6.79:48,7,0	0/1:8,0:8:3.54:34,0,4	1/1:24,0:22:18.30:90,18,0	0/1:9,5:14:20.61:125,0,21	0/0:21,0:19:38.66:0,39,416	0/1:21,0:21:32.75:33,0,179	1/1:6,0:5:8.18:47,8,0	1/1:12,0:12:8.27:32,8,0	1/1:11,0:7:5.19:20,5,0	1/1:6,0:5:6.52:22,7,0	0/1:9,0:8:7.86:16,0,8	0/1:11,1:10:10.54:43,0,11	1/1:12,1:13:6.64:33,7,0	1/1:23,0:20:32.26:325,32,0	0/1:10,1:11:12.31:32,0,12	0/1:12,0:9:0.40:73,0,0
chr10	58865222	.	C	CTGTGTG	6697.15	PASS	AB=0.974;AC=39;AF=0.696;AN=56;BaseQRankSum=-0.134;DP=451;FS=6.099;HRun=0;HaplotypeScore=142.2693;InbreedingCoeff=0.4313;MQ=38.10;MQ0=32;MQRankSum=-5.012;QD=19.24;ReadPosRankSum=-2.779;VQSLOD=3.8431;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:25:38.83:39,0,472	0/0:5,0:5:9.50:0,10,153	0/1:18,0:2:5.02:5,0,12	0/0:19,0:5:12.04:0,12,228	0/0:20,0:20:23.63:0,24,366	1/1:14,0:14:15.05:371,15,0	1/1:20,0:21:11.99:242,12,0	0/1:19,0:17:22.02:172,0,22	0/0:12,0:12:11.93:0,12,128	0/1:17,3:20:32.35:652,0,32	1/1:6,4:10:2.60:75,3,0	1/1:10,0:11:21.04:463,21,0	1/1:14,0:13:15.05:320,15,0	1/1:8,0:9:9.03:190,9,0	1/1:20,9:28:33.09:899,33,0	0/1:15,0:15:31.51:32,0,52	0/0:22,0:20:29.93:0,30,477	0/0:10,0:24:6.09:0,6,24	1/1:11,0:10:18.05:422,18,0	1/1:9,5:14:8.75:167,9,0	1/1:7,2:7:2.95:98,3,0	1/1:11,0:10:3:25,3,0	1/1:9,0:9:6:112,6,0	1/1:13,0:12:15.05:362,15,0	1/1:15,2:17:6.18:305,6,0	1/1:18,6:23:48.02:1069,48,0	1/1:11,2:13:12.04:364,12,0	1/1:11,1:9:12.04:314,12,0
chr10	58867627	.	A	ATTG	11768.71	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-12.549;DP=779;FS=0.000;HRun=0;HaplotypeScore=102.8369;InbreedingCoeff=0.9993;MQ=66.67;MQ0=0;MQRankSum=-6.142;QD=53.49;ReadPosRankSum=1.954;VQSLOD=6.8432;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,120,1959	0/0:8,0:8:24.08:0,24,389	0/0:23,0:23:48.14:0,48,717	0/0:15,0:15:23.97:0,24,342	0/0:25,0:25:69.24:0,69,1123	1/1:1,20:21:63.22:1400,63,0	1/1:4,17:21:51.11:1088,51,0	0/0:28,0:27:81.26:0,81,1281	0/0:34,0:34:96.31:0,96,1540	0/0:31,0:31:78.25:0,78,1230	0/0:24,0:24:69.24:0,69,1127	1/1:0,31:31:72.25:1605,72,0	1/1:0,39:40:96.33:2126,96,0	0/0:28,0:28:84.29:0,84,1371	0/0:31,0:31:87.30:0,87,1421	0/0:47,0:47:99:0,129,2080	0/0:38,0:38:99:0,111,1786	1/1:2,30:33:72.25:1607,72,0	0/0:15,0:15:42.13:0,42,658	0/0:38,0:38:99:0,111,1783	0/0:37,0:36:99:0,108,1734	1/1:1,25:26:72.25:1605,72,0	1/1:1,18:22:47.83:1066,48,0	1/1:4,21:25:57.20:1272,57,0	0/0:20,0:20:54.16:0,54,834	0/0:26,0:26:78.26:0,78,1242	0/0:28,0:28:78.24:0,78,1248	0/0:21,0:21:63.18:0,63,978
chr10	58869399	.	TA	T	8990.85	PASS	AB=0.519;AC=51;AF=0.944;AN=54;BaseQRankSum=-0.811;DP=423;FS=0.000;HRun=2;HaplotypeScore=213.4563;InbreedingCoeff=0.5178;MQ=42.84;MQ0=2;MQRankSum=-2.954;QD=22.42;ReadPosRankSum=1.038;VQSLOD=4.3438;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,20:22:30.10:388,30,0	1/1:0,10:10:27.09:349,27,0	./.	0/0:12,0:7:3.54:0,4,77	0/1:1,13:14:0:0,0,0	1/1:0,16:15:39.13:499,39,0	1/1:2,22:19:48.14:616,48,0	1/1:2,26:28:78.25:1011,78,0	1/1:0,13:13:30.10:389,30,0	1/1:2,17:19:51.12:642,51,0	1/1:0,11:11:6.02:74,6,0	1/1:2,16:15:30.09:384,30,0	1/1:1,11:10:21.07:266,21,0	1/1:3,13:14:21.05:271,21,0	1/1:0,19:18:30.10:388,30,0	1/1:1,11:11:30.10:388,30,0	1/1:0,18:15:39.08:485,39,0	1/1:0,18:12:33.11:427,33,0	1/1:2,14:12:33.11:425,33,0	1/1:1,15:16:5.63:77,6,0	1/1:3,14:11:7.56:82,8,0	1/1:1,11:12:9.45:117,9,0	1/1:0,5:5:12.04:155,12,0	1/1:0,10:9:9.03:117,9,0	1/1:3,9:12:11.65:155,12,0	1/1:0,19:19:54.18:700,54,0	1/1:0,18:18:36.46:467,36,0	1/1:1,4:5:9.03:117,9,0
chr10	58869419	.	ACCCACC	A	2870.23	PASS	AB=0.960;AC=39;AF=0.780;AN=50;BaseQRankSum=-1.579;DP=438;FS=0.000;HRun=0;HaplotypeScore=193.6756;InbreedingCoeff=0.4207;MQ=40.83;MQ0=34;MQRankSum=-1.096;QD=9.41;ReadPosRankSum=-2.083;VQSLOD=2.2393;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:19:6.02:73,6,0	1/1:6,1:8:12.04:178,12,0	./.	0/0:47,0:7:11.80:0,12,111	0/0:8,0:9:2.74:0,3,25	1/1:19,0:16:5.51:54,6,0	1/1:22,0:18:2.66:17,3,0	1/1:21,0:21:36.92:551,37,0	0/1:10,0:11:50.60:69,0,51	1/1:12,0:12:23.83:240,24,0	./.	1/1:15,3:17:17.62:259,18,0	1/1:13,2:11:5.12:66,5,0	1/1:6,1:10:9.07:118,9,0	1/1:18,0:17:11.52:119,12,0	0/0:10,0:11:8.70:0,9,116	1/1:17,1:16:20.14:328,20,0	0/1:21,0:12:10.12:173,0,10	1/1:9,0:7:14.27:193,14,0	0/0:10,0:8:0:0,0,0	0/1:17,0:9:0:0,0,0	1/1:7,0:7:0.11:0,0,0	./.	1/1:10,2:10:0.20:1,0,0	1/1:6,0:6:2.44:8,2,0	1/1:16,0:14:23.11:299,23,0	1/1:9,1:12:14.99:199,15,0	1/1:6,0:5:5.79:55,6,0
chr10	58869423	.	ACC	A	1793.46	PASS	AB=1.000;AC=45;AF=0.865;AN=52;BaseQRankSum=0.480;DP=466;FS=3.966;HRun=3;HaplotypeScore=181.3210;InbreedingCoeff=0.3541;MQ=38.65;MQ0=46;MQRankSum=-2.476;QD=5.29;ReadPosRankSum=0.461;VQSLOD=-0.0025;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:18:8.86:58,9,0	1/1:7,1:8:11.92:97,12,0	./.	0/0:51,0:6:5.60:0,6,42	1/1:11,0:11:2.69:21,3,0	1/1:19,0:15:4.98:24,5,0	1/1:25,0:20:8.03:41,8,0	1/1:21,0:20:36.93:253,37,0	1/1:11,0:10:9.34:53,9,0	1/1:14,0:13:19.03:126,19,0	./.	1/1:20,0:17:17.53:124,18,0	1/1:17,0:13:6.34:36,6,0	1/1:10,1:11:7.92:66,8,0	1/1:20,0:17:11.62:102,12,0	0/1:12,0:11:8.53:18,0,9	1/1:20,0:17:24.94:177,25,0	1/1:24,0:14:13.40:157,13,0	1/1:11,0:8:15.45:107,15,0	0/0:10,0:8:0:0,0,0	0/0:17,0:9:0:0,0,0	1/1:8,0:8:0.34:1,0,0	1/1:11,0:8:1.49:17,1,0	1/1:11,0:9:0.05:0,0,0	1/1:5,0:5:2.74:25,3,0	1/1:21,0:18:35.60:229,36,0	1/1:10,2:12:15.75:118,16,0	1/1:7,0:5:8.24:44,8,0
chr10	58869462	.	CT	C	7865.61	PASS	AB=0.811;AC=51;AF=0.944;AN=54;BaseQRankSum=-1.797;DP=505;FS=0.000;HRun=1;HaplotypeScore=80.5089;InbreedingCoeff=-0.0744;MQ=50.78;MQ0=41;MQRankSum=0.585;QD=15.61;ReadPosRankSum=2.514;VQSLOD=4.8069;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,20:21:21.52:271,22,0	1/1:0,4:4:12.03:147,12,0	0/1:49,3:11:91.46:91,0,178	0/1:69,3:20:43.96:44,0,247	1/1:0,12:13:24.07:314,24,0	1/1:3,19:18:27.09:373,27,0	1/1:1,21:14:27.09:368,27,0	1/1:1,16:15:38.34:502,38,0	1/1:0,11:11:24.08:326,24,0	1/1:1,21:22:66.10:830,66,0	./.	1/1:0,18:12:21.07:280,21,0	0/1:1,9:10:3.20:190,0,3	1/1:0,19:15:20.70:288,21,0	1/1:0,10:7:12.02:141,12,0	1/1:1,17:18:36.02:444,36,0	1/1:3,17:15:28.49:407,28,0	1/1:2,21:12:22.87:315,23,0	1/1:4,16:15:30:452,30,0	1/1:0,3:3:6.02:83,6,0	1/1:3,17:10:6.02:83,6,0	1/1:1,9:9:12.02:165,12,0	1/1:2,9:9:11.71:165,12,0	1/1:0,14:12:14.52:206,15,0	1/1:0,6:5:15.05:207,15,0	1/1:1,15:16:45.06:554,45,0	1/1:0,19:19:45.14:589,45,0	1/1:0,1:1:3.01:30,3,0
chr10	58871141	.	TA	T	4744.13	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=11.198;DP=577;FS=6.140;HRun=6;HaplotypeScore=59.6190;InbreedingCoeff=0.9953;MQ=86.49;MQ0=0;MQRankSum=-1.728;QD=28.58;ReadPosRankSum=2.162;VQSLOD=5.6013;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,150,1971	0/0:6,0:6:18.06:0,18,236	0/0:22,0:22:57.18:0,57,736	0/0:14,0:15:26.09:0,26,373	0/0:15,0:15:39.13:0,39,513	1/1:0,27:27:78.20:838,78,0	1/1:4,23:27:63.15:677,63,0	0/0:30,0:30:84.27:0,84,1105	0/0:17,0:17:51.17:0,51,671	0/0:19,0:19:54.17:0,54,699	0/0:6,0:6:18.06:0,18,237	1/1:1,21:22:61.71:649,62,0	1/1:1,27:28:78.19:838,78,0	0/0:17,0:17:51.17:0,51,671	0/0:24,0:24:66.19:0,66,851	0/0:16,0:16:48.14:0,48,617	0/0:40,0:40:99:0,114,1485	1/1:3,20:23:60.15:645,60,0	0/0:20,0:20:57.17:0,57,734	0/0:12,0:12:33.11:0,33,434	0/0:18,0:18:51.17:0,51,671	1/1:0,8:8:24.06:258,24,0	1/1:2,12:14:33.08:355,33,0	1/1:1,16:17:45.11:484,45,0	0/0:19,0:19:57.19:0,57,750	0/0:29,0:29:84.27:0,84,1105	0/0:26,0:25:75.24:0,75,985	0/0:7,0:7:18.06:0,18,237
chr10	58871426	.	C	CAG	660.58	PASS	AB=1.000;AC=19;AF=0.365;AN=52;BaseQRankSum=3.124;DP=137;FS=12.623;HRun=0;HaplotypeScore=26.1557;InbreedingCoeff=0.5315;MQ=65.19;MQ0=0;MQRankSum=-1.056;QD=8.36;ReadPosRankSum=0.603;VQSLOD=1.4664;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:4:11.95:0,12,94	0/0:1,0:1:2.98:0,3,21	0/0:2,0:2:6.02:0,6,67	0/0:2,0:2:3:0,3,25	0/0:1,0:1:3:0,3,26	1/1:9,0:9:20.92:167,21,0	1/1:0,0:6:3.01:37,3,0	0/0:3,0:3:8.85:0,9,68	0/0:1,0:1:3:0,3,26	0/0:5,0:5:8.93:0,9,64	0/0:3,0:3:5.93:0,6,40	1/1:7,0:7:20.08:140,20,0	1/1:7,0:7:15.40:119,15,0	0/0:6,0:6:11.81:0,12,85	0/0:5,0:5:5.92:0,6,39	0/0:6,0:6:5.97:0,6,46	0/0:4,0:4:7.24:0,7,53	1/1:1,12:13:3.01:60,3,0	./.	0/0:2,0:2:3:0,3,26	0/1:6,0:6:2.34:2,0,57	./.	1/1:8,0:8:23.97:217,24,0	1/1:0,8:9:3.01:60,3,0	0/0:1,0:1:3:0,3,27	0/0:5,0:5:12.01:0,12,107	1/1:11,0:11:1.73:10,2,0	1/1:3,0:3:2.60:10,3,0
chr10	58871496	.	G	GC	1612.10	PASS	AB=1.000;AC=39;AF=0.780;AN=50;BaseQRankSum=-0.483;DP=156;FS=15.460;HRun=0;HaplotypeScore=21.6494;InbreedingCoeff=0.5726;MQ=73.53;MQ0=0;MQRankSum=-1.064;QD=14.27;ReadPosRankSum=1.316;VQSLOD=2.4866;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:26.98:0,27,228	1/1:1,0:1:2.04:6,2,0	0/1:5,0:3:3.89:4,0,69	0/0:5,0:5:2.11:0,2,36	0/0:3,0:3:6:0,6,51	1/1:17,1:18:43.58:299,44,0	1/1:16,1:17:39.58:315,40,0	1/1:5,0:5:11.97:101,12,0	0/0:5,0:5:9.41:0,9,55	./.	./.	1/1:6,0:6:16.89:113,17,0	1/1:5,0:5:11.74:84,12,0	1/1:3,0:3:7:29,7,0	1/1:5,0:5:4.81:30,5,0	0/0:15,0:15:23.87:0,24,199	1/1:3,0:3:8.89:62,9,0	1/1:1,4:5:3.01:34,3,0	1/1:5,0:5:14.96:123,15,0	1/1:3,0:3:5.99:49,6,0	1/1:5,0:5:11.98:99,12,0	1/1:2,0:2:2.94:18,3,0	1/1:1,0:1:2.98:22,3,0	1/1:6,1:7:14.76:114,15,0	./.	1/1:0,2:2:2.98:22,3,0	1/1:11,0:11:26.71:205,27,0	1/1:2,1:3:5.93:40,6,0
chr10	58874702	.	C	CA	1302.60	PASS	AB=0.866;AC=36;AF=0.643;AN=56;BaseQRankSum=0.988;DP=582;FS=2.965;HRun=17;HaplotypeScore=85.6006;InbreedingCoeff=-0.1159;MQ=44.07;MQ0=21;MQRankSum=-3.900;QD=2.45;ReadPosRankSum=-0.419;VQSLOD=-0.4933;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:41,2:45:38.35:38,0,138	0/1:13,3:16:28.36:28,0,44	0/1:9,0:2:2.58:3,0,4	0/1:8,0:3:0:0,0,0	0/0:30,0:30:29.68:0,30,144	0/1:6,1:16:6.72:28,0,7	1/1:6,1:15:14.35:79,14,0	0/1:23,6:27:13.05:59,0,13	0/0:16,2:18:10.77:0,11,56	0/1:19,3:22:37.52:61,0,38	0/1:16,8:24:12.94:92,0,13	0/1:19,1:18:3.95:27,0,4	1/1:18,0:17:6.85:54,7,0	0/1:14,1:15:4.79:58,0,5	0/1:15,1:18:11.64:29,0,12	1/1:7,8:14:11.58:106,12,0	1/1:10,12:21:2.47:93,2,0	1/1:7,0:17:11.05:49,11,0	0/1:21,3:24:46.37:46,0,56	0/1:17,2:21:10.99:101,0,11	1/1:11,1:13:6.38:41,6,0	1/1:9,0:14:10.48:49,10,0	1/1:11,0:30:16.47:84,16,0	1/1:10,0:19:8.52:43,9,0	0/1:10,5:15:8.32:18,0,8	1/1:27,6:36:19.57:156,20,0	0/1:19,2:20:1.32:58,0,1	0/1:11,4:12:0.31:57,0,0
chr10	58875265	.	T	TCACACACACA	5098.93	PASS	AC=40;AF=0.769;AN=52;BaseQRankSum=-2.189;DP=643;FS=3.666;HRun=0;HaplotypeScore=190.9684;InbreedingCoeff=0.6829;MQ=64.27;MQ0=10;MQRankSum=-3.781;QD=11.61;ReadPosRankSum=-3.607;VQSLOD=3.2347;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:32:39.06:0,39,844	1/1:5,0:3:6.02:117,6,0	./.	0/0:39,0:20:2.99:0,3,26	0/0:14,0:15:15.05:0,15,381	1/1:18,0:23:9.03:240,9,0	1/1:25,1:33:6.49:298,6,0	1/1:21,0:21:15.03:330,15,0	0/0:23,0:23:28.97:0,29,625	1/1:23,0:23:18.05:377,18,0	1/1:7,0:9:0.47:1,0,0	1/1:22,0:29:8.67:211,9,0	1/1:18,9:28:14.53:642,15,0	1/1:23,5:32:15.05:632,15,0	1/1:15,0:21:6.02:167,6,0	0/0:13,0:21:31.36:0,31,603	1/1:23,0:23:2.97:22,3,0	0/0:12,0:18:15.05:0,15,359	1/1:21,0:21:10.27:198,10,0	1/1:13,3:17:6.02:279,6,0	1/1:30,0:29:6.02:93,6,0	1/1:22,0:22:15.03:244,15,0	./.	1/1:25,7:33:5.69:159,6,0	1/1:17,3:18:3.01:148,3,0	1/1:21,0:20:18.95:466,19,0	1/1:22,0:21:17.75:428,18,0	1/1:4,0:4:3.01:46,3,0
chr10	58875834	.	C	CATGTGT	5749.92	PASS	AB=0.952;AC=29;AF=0.518;AN=56;BaseQRankSum=6.010;DP=598;FS=10.919;HRun=0;HaplotypeScore=180.6412;InbreedingCoeff=0.9165;MQ=58.80;MQ0=12;MQRankSum=-4.294;QD=20.18;ReadPosRankSum=-1.732;VQSLOD=3.5572;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:44:99:0,104,1114	1/1:4,0:4:11.93:92,12,0	0/0:32,0:18:44.08:0,44,453	0/0:25,0:14:34.82:0,35,309	0/0:20,0:20:41.68:0,42,438	0/0:12,0:11:14.64:0,15,105	0/0:24,0:22:28.63:0,29,257	1/1:21,0:21:56.22:469,56,0	0/0:34,0:35:89.59:0,90,1061	1/1:24,0:23:62.94:715,63,0	1/1:15,0:16:30.24:295,30,0	0/0:24,0:24:44.81:0,45,543	0/0:16,0:15:20.83:0,21,192	1/1:25,0:25:51.05:617,51,0	1/1:34,0:37:35.45:371,35,0	0/1:19,0:20:55.85:56,0,136	1/1:26,0:25:56.54:469,57,0	0/0:14,0:13:14.74:0,15,102	1/1:1,10:15:44.42:538,44,0	1/1:8,0:9:20.96:205,21,0	1/1:25,0:24:50.76:395,51,0	0/0:29,0:29:22.70:0,23,159	0/0:22,0:22:34.09:0,34,288	0/0:16,0:15:23.51:0,24,220	1/1:18,0:18:36.46:395,36,0	1/1:24,0:24:62.86:701,63,0	1/1:10,0:11:24:250,24,0	1/1:8,0:8:20.92:182,21,0
chr10	58875874	.	TGTGA	T	549.85	PASS	AB=0.995;AC=22;AF=0.393;AN=56;BaseQRankSum=1.404;DP=543;FS=9.491;HRun=0;HaplotypeScore=136.2448;InbreedingCoeff=-0.0610;MQ=39.41;MQ0=28;MQRankSum=-2.014;QD=1.50;ReadPosRankSum=-1.685;VQSLOD=1.6369;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:43,0:42:7.85:8,0,439	0/1:1,0:1:0:0,0,0	0/1:15,0:4:1.73:2,0,32	0/0:33,0:4:1.92:0,2,24	0/0:15,0:14:21.05:0,21,325	0/0:6,11:16:0.47:0,0,2	1/1:19,0:16:8.35:94,8,0	0/0:16,0:15:29.74:0,30,238	0/0:25,0:25:48.24:0,48,691	0/1:18,0:17:21.55:22,0,85	0/0:12,0:12:5.99:0,6,49	0/1:21,0:19:61.32:61,0,86	1/1:6,14:19:18.28:176,18,0	0/1:23,0:22:5.22:5,0,102	0/1:43,0:43:14.36:14,0,38	0/0:19,0:18:1.23:0,1,124	0/1:20,0:18:13.80:14,0,29	0/0:14,0:12:2.88:0,3,17	0/1:21,0:18:39.25:39,0,210	0/0:12,0:12:2.98:0,3,21	0/0:13,0:13:1.25:0,1,3	0/1:26,2:28:0.26:0,0,0	1/1:7,9:16:0.21:1,0,0	1/1:20,3:19:9.03:168,9,0	0/1:16,0:16:15.03:15,0,33	0/1:18,0:18:48.54:49,0,132	0/1:17,0:17:22.45:22,0,87	0/1:5,0:5:1.98:2,0,16
chr10	58875876	.	TGAGTGTGAGAGAGAGA	T	798.55	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=5.085;DP=543;FS=16.064;HRun=0;HaplotypeScore=188.3379;InbreedingCoeff=0.0509;MQ=38.69;MQ0=27;MQRankSum=-3.600;QD=4.44;ReadPosRankSum=1.083;VQSLOD=1.9416;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:70.38:0,70,2178	0/1:1,0:1:0:0,0,0	0/0:18,0:6:18.06:0,18,448	0/0:37,0:6:17.63:0,18,244	0/0:13,0:12:21.07:0,21,775	0/0:16,0:15:2.51:0,3,7	1/1:8,0:15:6.35:81,6,0	0/1:20,0:19:49.56:50,0,228	0/0:24,0:24:52.88:0,53,1777	0/1:17,0:16:99:160,0,204	0/0:11,0:11:6.02:0,6,99	0/0:21,0:19:22.51:0,23,413	0/1:20,0:19:13.69:188,0,14	0/0:23,0:22:21.94:0,22,322	0/0:41,0:41:6.55:0,7,129	0/0:19,0:18:23.12:0,23,597	0/1:20,0:18:73.42:121,0,73	0/0:15,0:13:6.01:0,6,139	0/1:21,0:18:88.04:88,0,409	0/0:11,0:11:3.48:0,3,41	0/0:14,0:14:1.25:0,1,3	0/0:6,22:28:0:0,0,1	0/0:14,0:15:2.90:0,3,17	1/1:21,0:18:8.81:99,9,0	0/0:16,0:16:6.02:0,6,136	0/1:18,0:18:99:109,0,313	0/1:17,0:17:12.67:13,0,233	0/1:6,0:6:34.86:35,0,68
chr10	58875878	.	AGT	A	49.48	PASS	AB=0.988;AC=15;AF=0.268;AN=56;BaseQRankSum=5.342;DP=538;FS=6.471;HRun=0;HaplotypeScore=132.9787;InbreedingCoeff=0.2619;MQ=38.61;MQ0=26;MQRankSum=-1.184;QD=0.29;ReadPosRankSum=1.209;VQSLOD=2.0832;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:41:39.37:0,39,515	0/1:1,0:1:0:0,0,0	0/0:20,0:6:17.20:0,17,174	0/0:40,0:6:14.27:0,14,84	0/0:13,0:12:20.68:0,21,223	0/0:15,1:15:0.47:0,0,1	1/1:18,0:15:5.65:36,6,0	0/0:19,0:18:2.13:0,2,117	0/0:25,0:25:50.56:0,51,622	0/1:17,0:16:32.90:33,0,58	0/0:11,0:11:5.99:0,6,50	0/0:21,1:20:4.74:0,5,179	0/1:19,1:19:0.49:21,0,0	0/0:23,0:22:14.90:0,15,111	0/0:39,0:39:5.83:0,6,47	0/0:20,0:19:9.65:0,10,128	0/0:20,0:18:1.91:0,2,34	1/1:15,0:13:1.82:5,2,0	0/1:19,0:17:3.91:4,0,171	0/0:11,0:11:2.92:0,3,17	0/0:13,0:13:3.28:0,3,9	0/1:27,1:28:0.34:1,0,0	1/1:13,1:14:2.30:20,2,0	1/1:21,0:17:8.09:41,8,0	0/1:14,0:14:10.33:10,0,18	0/0:15,0:15:0.29:0,0,108	0/0:15,1:16:14.01:0,14,81	0/1:6,0:6:12.46:12,0,14
chr10	58875882	.	TGAGAGAGAGAGAGA	T	2465.81	PASS	AB=0.788;AC=14;AF=0.259;AN=54;BaseQRankSum=1.228;DP=537;FS=2.236;HRun=0;HaplotypeScore=169.4862;InbreedingCoeff=0.0808;MQ=38.02;MQ0=26;MQRankSum=-4.928;QD=12.65;ReadPosRankSum=0.387;VQSLOD=2.6112;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:45:73.43:0,73,2530	0/1:0,1:1:0:0,0,0	0/0:20,0:6:18.06:0,18,485	0/0:40,0:6:17.65:0,18,274	0/0:13,0:12:18.05:0,18,516	0/0:17,0:16:3.07:0,3,12	0/0:20,0:17:0.47:0,0,1	1/1:6,13:18:39.12:743,39,0	0/0:23,0:23:45.63:0,46,1782	0/1:6,8:16:36.61:518,0,37	./.	0/0:16,0:14:18.32:0,18,317	0/1:22,0:21:37.53:76,0,38	0/1:18,1:20:3.37:3,0,54	0/0:28,0:39:3.52:0,4,27	0/0:21,0:20:24.03:0,24,475	1/1:14,1:18:4.24:395,4,0	0/0:15,0:12:6.02:0,6,178	0/1:16,0:15:99:410,0,105	0/0:7,2:10:0.94:0,1,2	0/0:14,0:13:3.01:0,3,137	0/1:30,0:30:0:0,0,0	0/0:15,0:15:2.95:0,3,21	0/0:22,0:17:1.47:0,1,4	0/1:11,0:15:1.68:2,0,82	0/1:10,2:13:47.70:290,0,48	0/1:8,1:15:67.67:68,0,92	0/1:3,0:6:27.74:96,0,28
chr10	58875907	.	GAC	G	361.73	PASS	AB=0.978;AC=20;AF=0.357;AN=56;BaseQRankSum=4.905;DP=509;FS=8.809;HRun=0;HaplotypeScore=116.0951;InbreedingCoeff=-0.2004;MQ=36.73;MQ0=28;MQRankSum=-3.165;QD=1.05;ReadPosRankSum=1.676;VQSLOD=1.7788;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:41,1:41:47.20:47,0,570	0/0:2,0:2:2.78:0,3,24	0/1:20,0:6:7.49:7,0,93	0/1:43,0:6:2.05:2,0,28	0/0:7,0:7:9.03:0,9,173	1/1:20,0:19:3.53:12,4,0	0/0:15,0:12:5.99:0,6,49	0/0:21,0:18:3.90:0,4,128	0/0:25,0:25:56.79:0,57,738	0/1:19,0:17:59.18:59,0,63	0/0:7,0:7:2.99:0,3,24	0/0:14,0:12:2.42:0,2,34	0/1:17,0:16:9.53:53,0,10	1/1:21,1:22:5.13:27,5,0	0/1:26,0:26:16.37:18,0,16	0/1:21,0:19:20.51:21,0,74	0/1:18,1:19:16.20:16,0,105	1/1:12,0:9:0.23:18,0,0	0/1:14,1:13:61.07:88,0,61	0/1:15,0:15:0.20:0,0,0	0/0:17,0:15:3.01:0,3,42	0/0:25,0:25:2.97:0,3,20	0/0:10,1:10:2.99:0,3,24	0/0:21,0:16:2.79:0,3,23	0/1:15,2:17:2.38:34,0,2	0/1:16,0:15:54.58:71,0,55	0/1:14,1:15:5.99:6,0,29	0/1:5,0:5:9.29:22,0,9
chr10	58875909	.	CAG	C	171.06	PASS	AB=0.954;AC=15;AF=0.268;AN=56;BaseQRankSum=3.009;DP=511;FS=16.334;HRun=0;HaplotypeScore=116.1662;InbreedingCoeff=-0.0789;MQ=38.29;MQ0=27;MQRankSum=-0.649;QD=0.68;ReadPosRankSum=-0.328;VQSLOD=1.2661;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:39:49.55:0,50,791	0/0:2,0:2:2.80:0,3,48	0/1:21,1:7:28.09:28,0,114	0/1:48,0:9:2.80:3,0,36	0/0:7,0:7:9.03:0,9,165	0/0:13,5:17:2.97:0,3,10	0/0:10,3:12:6.02:0,6,86	0/0:22,0:19:45.81:0,46,441	0/0:24,0:24:57.18:0,57,922	0/1:19,0:17:8.32:8,0,216	0/0:7,0:7:3.01:0,3,48	1/1:11,1:10:5.03:30,5,0	0/1:10,8:17:67.70:123,0,68	1/1:22,0:23:2.85:18,3,0	0/0:27,0:27:10.87:0,11,63	0/1:20,0:18:16.30:16,0,121	0/0:20,0:19:22.22:0,22,305	0/1:12,0:9:7.90:8,0,10	0/1:16,0:14:16.46:16,0,163	0/0:14,0:14:1.55:0,2,4	0/0:16,0:15:3.01:0,3,54	0/0:21,3:24:6.01:0,6,66	0/1:9,2:10:0.02:0,0,0	0/0:18,3:16:2.81:0,3,42	0/1:18,0:18:14.05:23,0,14	0/1:16,0:15:30.57:31,0,144	0/1:16,0:16:3.03:3,0,63	0/0:5,0:5:3.01:0,3,37
chr10	58875913	.	GAC	G	1074.73	PASS	AB=0.902;AC=24;AF=0.429;AN=56;BaseQRankSum=5.018;DP=525;FS=13.745;HRun=0;HaplotypeScore=116.3411;InbreedingCoeff=-0.1506;MQ=38.95;MQ0=27;MQRankSum=-3.417;QD=3.12;ReadPosRankSum=-0.752;VQSLOD=1.6204;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:40:64.61:0,65,968	0/0:3,0:3:2.80:0,3,52	0/1:18,0:5:17.83:18,0,95	0/1:48,1:9:29.94:30,0,41	0/0:9,0:9:9.03:0,9,168	1/1:19,0:18:8.28:58,8,0	0/0:14,0:13:5.77:0,6,37	0/0:23,0:20:15.34:0,15,487	0/0:24,0:24:57.19:0,57,974	0/1:19,2:19:99:152,0,187	0/1:7,1:8:18.91:19,0,46	1/1:12,0:10:8.66:53,9,0	1/1:18,0:17:1.71:81,2,0	1/1:13,11:24:8.87:78,9,0	0/0:25,0:25:3.14:0,3,9	0/1:22,1:21:89.22:114,0,89	0/1:20,0:19:7.89:8,0,286	0/1:10,0:8:5.97:65,0,6	0/1:14,2:14:99:123,0,157	0/1:15,1:16:9.24:18,0,9	0/0:18,0:17:3.01:0,3,50	0/0:23,0:23:2.81:0,3,17	1/1:10,0:9:2.94:24,3,0	0/1:17,4:16:12.02:18,0,12	0/1:16,4:20:14.88:73,0,15	0/1:10,6:15:62.94:225,0,63	0/1:9,10:19:6.06:50,0,6	0/1:5,0:5:15.06:28,0,15
chr10	58875917	.	GAGAC	G	1211.48	PASS	AB=0.984;AC=29;AF=0.518;AN=56;BaseQRankSum=4.275;DP=544;FS=7.084;HRun=0;HaplotypeScore=122.5460;InbreedingCoeff=-0.1786;MQ=42.04;MQ0=26;MQRankSum=-1.758;QD=2.72;ReadPosRankSum=-1.623;VQSLOD=1.6337;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:43,0:42:99:102,0,553	1/1:3,0:3:2.98:22,3,0	0/0:16,0:5:4.08:0,4,71	0/1:54,0:9:18.05:18,0,95	0/0:8,3:11:8.98:0,9,73	1/1:20,0:20:1.84:9,2,0	0/0:16,0:16:5.31:0,5,48	0/1:21,3:21:93.83:94,0,116	0/1:24,0:24:2.16:2,0,717	0/1:21,0:19:86.84:136,0,87	1/1:11,0:11:5.54:64,6,0	1/1:13,0:12:8.88:66,9,0	0/1:17,0:17:8.79:47,0,9	1/1:26,0:26:5.60:35,6,0	1/1:22,1:23:3.92:18,4,0	0/1:24,0:22:9.19:73,0,9	0/1:17,3:19:0.58:254,0,1	0/1:7,0:7:14.80:19,0,15	0/1:16,0:14:44.56:137,0,45	0/0:16,0:16:0.27:0,0,1	0/0:18,0:17:2.80:0,3,13	0/0:19,0:21:2.88:0,3,19	1/1:10,0:9:1.61:5,2,0	0/1:22,0:17:35.72:36,0,37	0/1:19,0:19:1.49:1,0,14	0/1:16,0:15:20.81:139,0,21	0/1:20,0:19:2.63:50,0,3	0/1:7,0:7:8.04:27,0,8
chr10	58875919	.	GAC	G	1586.40	PASS	AB=0.991;AC=29;AF=0.518;AN=56;BaseQRankSum=4.816;DP=546;FS=8.609;HRun=0;HaplotypeScore=113.4620;InbreedingCoeff=-0.0235;MQ=42.27;MQ0=26;MQRankSum=-2.930;QD=3.74;ReadPosRankSum=-3.011;VQSLOD=1.3210;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:44:49.45:0,49,688	0/0:3,0:3:2.73:0,3,17	0/1:16,0:5:0.08:0,0,63	0/1:48,1:9:20.64:21,0,53	0/0:11,0:11:8.98:0,9,73	1/1:21,0:20:8.54:60,9,0	0/0:17,0:16:5.67:0,6,37	0/1:25,0:22:9.68:10,0,132	0/0:24,0:24:42.32:0,42,609	0/1:20,1:19:64.26:151,0,64	0/1:11,0:11:8.72:35,0,9	1/1:14,0:12:11.75:77,12,0	0/1:18,0:17:2.70:76,0,3	1/1:25,1:26:14.83:123,15,0	1/1:15,9:24:11.61:179,12,0	0/1:22,0:20:5.45:139,0,5	0/1:20,0:19:48.25:48,0,59	1/1:9,0:7:8.91:76,9,0	0/1:16,0:14:43.59:133,0,44	0/1:16,0:16:0.89:19,0,1	0/1:19,0:18:6.99:16,0,7	0/0:22,0:21:2.81:0,3,17	1/1:11,0:10:5.94:49,6,0	0/1:22,0:17:12.02:18,0,12	0/1:19,1:20:6.74:94,0,7	0/1:16,0:15:13.53:265,0,14	1/1:19,1:19:17.43:129,17,0	0/1:7,0:7:5.97:34,0,6
chr10	58875921	.	C	CAG	1814.99	PASS	AB=0.961;AC=40;AF=0.741;AN=54;BaseQRankSum=0.385;DP=552;FS=7.744;HRun=0;HaplotypeScore=117.0971;InbreedingCoeff=-0.0922;MQ=42.91;MQ0=23;MQRankSum=-2.305;QD=3.63;ReadPosRankSum=-2.276;VQSLOD=1.7344;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:21,23:44:99:450,0,151	1/1:3,1:4:3.01:46,3,0	0/1:15,0:5:6.39:6,0,26	0/1:45,0:9:7.72:8,0,57	./.	1/1:20,0:19:0.88:2,1,0	0/0:17,0:16:5.13:0,5,34	1/1:24,0:21:12:148,12,0	0/1:21,1:24:33.97:34,0,259	0/1:22,0:20:22.78:23,0,23	1/1:11,1:12:5.57:88,6,0	1/1:14,0:12:8.04:73,8,0	0/1:19,0:18:25.49:37,0,25	1/1:26,0:26:5.97:48,6,0	1/1:23,0:24:9.19:54,9,0	0/1:23,0:21:1.19:147,0,1	1/1:15,4:18:24.08:346,24,0	1/1:10,0:9:10.99:84,11,0	1/1:18,0:16:1.46:60,1,0	1/1:17,0:17:2.38:24,2,0	1/1:21,0:20:2.98:22,3,0	0/0:24,0:23:2.55:0,3,17	1/1:12,0:11:7.81:55,8,0	0/1:20,0:15:11.76:36,0,12	0/1:21,0:21:17.02:17,0,21	0/1:16,0:15:5.14:66,0,5	1/1:21,0:20:9.14:56,9,0	1/1:7,0:7:4.71:28,5,0
chr10	58876975	.	G	GGA	20635.23	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-0.282;DP=865;FS=1.105;HRun=0;HaplotypeScore=110.8611;InbreedingCoeff=0.9997;MQ=81.80;MQ0=1;MQRankSum=-3.106;QD=49.01;ReadPosRankSum=0.146;VQSLOD=5.5677;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:66,0:65:99:0,181,2661	1/1:0,9:10:27.09:505,27,0	0/0:26,0:26:75.25:0,75,1085	0/0:22,0:22:59.87:0,60,833	0/0:32,0:32:87.29:0,87,1279	0/0:32,0:32:93.28:0,93,1330	0/0:28,0:28:75.25:0,75,1104	1/1:2,38:41:99:2057,114,0	0/0:29,0:29:87.29:0,87,1279	1/1:2,34:37:99:1896,105,0	1/1:0,11:12:30.10:561,30,0	0/0:35,0:35:96.32:0,96,1408	0/0:30,0:30:87.29:0,87,1279	1/1:2,31:33:81.25:1483,81,0	1/1:3,38:41:99:1911,102,0	0/0:38,0:38:99:0,114,1677	1/1:1,34:36:93.32:1742,93,0	0/0:19,0:19:57.19:0,57,839	1/1:2,29:31:87.30:1628,87,0	1/1:1,17:19:51.17:951,51,0	1/1:3,56:59:99:2753,147,0	0/0:25,0:25:63.21:0,63,927	0/0:24,0:24:60.19:0,60,856	0/0:38,0:38:99:0,111,1627	1/1:1,22:23:60.21:1124,60,0	1/1:2,39:41:99:2152,117,0	1/1:1,25:25:75.22:1365,75,0	1/1:0,10:10:27.09:506,27,0
chr10	58877312	.	GCC	G	4235.03	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=18.214;DP=663;FS=3.374;HRun=3;HaplotypeScore=146.2698;InbreedingCoeff=0.9996;MQ=82.90;MQ0=0;MQRankSum=-14.003;QD=23.79;ReadPosRankSum=-0.438;VQSLOD=2.9859;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,157,2924	0/0:8,0:8:24.08:0,24,463	0/0:28,0:28:78.18:0,78,1411	0/0:19,0:19:54.17:0,54,1012	0/0:17,0:17:48.15:0,48,886	1/1:6,25:31:77.91:699,78,0	1/1:4,16:20:47.98:412,48,0	0/0:23,0:23:66.20:0,66,1190	0/0:23,0:23:66.23:0,66,1275	0/0:16,0:16:45.15:0,45,865	0/0:14,0:14:42.14:0,42,805	1/1:4,26:30:86.76:758,87,0	1/1:4,13:17:39.50:379,40,0	0/0:19,1:20:35.44:0,35,1076	0/0:33,0:33:99:0,99,1861	0/0:21,0:21:63.19:0,63,1144	0/0:36,0:36:99:0,108,2056	1/1:1,21:22:62.84:788,63,0	0/0:18,0:18:48.14:0,48,842	0/0:19,0:19:57.17:0,57,1021	0/0:46,0:46:99:0,132,2543	1/1:3,14:18:41.87:360,42,0	1/1:2,20:22:59.81:474,60,0	1/1:2,16:18:43.16:365,43,0	0/0:21,0:21:60.21:0,60,1159	0/0:32,0:32:93.31:0,93,1755	0/0:22,0:22:66.23:0,66,1238	0/0:16,0:16:48.15:0,48,865
chr10	58877316	.	A	AG	3805.06	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=18.364;DP=632;FS=1.484;HRun=0;HaplotypeScore=132.9559;InbreedingCoeff=0.9996;MQ=84.06;MQ0=0;MQRankSum=-14.347;QD=23.78;ReadPosRankSum=-0.775;VQSLOD=3.8796;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,156,2070	0/0:8,0:8:24.08:0,24,335	0/0:27,0:27:81.24:0,81,1104	0/0:20,0:20:60.06:0,60,773	0/0:15,0:15:45.14:0,45,611	1/1:1,25:26:77.60:625,78,0	1/1:2,16:18:47.79:363,48,0	0/0:20,0:20:57.16:0,57,749	0/0:22,0:22:66.21:0,66,907	0/0:17,0:17:45.14:0,45,615	0/0:14,0:14:42.14:0,42,585	1/1:2,26:28:83.14:649,83,0	1/1:1,13:14:39.35:314,39,0	0/0:21,1:22:41.11:0,41,815	0/0:31,0:31:93.30:0,93,1283	0/0:18,0:18:54.18:0,54,754	0/0:40,0:40:99:0,114,1552	1/1:1,21:22:66.16:762,66,0	0/0:12,0:12:36.12:0,36,500	0/0:18,0:18:51.14:0,51,670	0/0:46,0:46:99:0,138,1894	1/1:1,14:15:41.58:320,42,0	1/1:0,20:20:57.36:397,57,0	1/1:1,16:17:47.63:374,48,0	0/0:21,0:21:63.20:0,63,863	0/0:32,0:32:93.30:0,93,1279	0/0:22,0:22:66.19:0,66,881	0/0:14,0:14:42.14:0,42,587
chr10	58878443	.	A	AAAAC	9272.28	PASS	AB=0.588;AC=15;AF=0.268;AN=56;BaseQRankSum=13.973;DP=732;FS=2.679;HRun=0;HaplotypeScore=117.0476;InbreedingCoeff=0.8639;MQ=64.06;MQ0=1;MQRankSum=-0.537;QD=39.29;ReadPosRankSum=1.833;VQSLOD=4.8846;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:87.24:0,87,1371	0/0:13,0:13:24.05:0,24,348	0/0:25,0:20:27.02:0,27,343	0/0:12,0:9:9:0,9,127	0/0:29,0:29:63.19:0,63,981	1/1:4,21:26:36.12:880,36,0	1/1:8,18:26:33.04:732,33,0	0/0:27,0:27:57.16:0,57,813	0/0:26,0:26:57.19:0,57,919	0/0:28,0:28:75.24:0,75,1191	0/0:22,0:22:42.13:0,42,668	1/1:4,31:35:69.24:1687,69,0	1/1:10,14:24:33.04:746,33,0	0/0:20,0:20:45.14:0,45,722	0/0:29,0:29:69.24:0,69,1142	0/0:18,0:18:51.16:0,51,817	0/0:31,0:31:81.27:0,81,1308	0/1:9,21:30:16.55:1165,0,17	0/0:25,0:25:45.11:0,45,665	0/0:36,0:36:84.28:0,84,1366	0/0:27,0:27:63.19:0,63,994	1/1:6,18:24:5.87:1191,6,0	1/1:4,23:28:51.56:1189,52,0	1/1:10,33:42:69.24:1682,69,0	0/0:26,0:26:63.18:0,63,970	0/0:28,0:28:63.17:0,63,925	0/0:23,0:23:48.16:0,48,796	0/0:8,0:8:6.02:0,6,83
chr10	58879337	.	T	TG	4655.13	PASS	AB=0.714;AC=31;AF=0.554;AN=56;BaseQRankSum=-4.544;DP=504;FS=4.908;HRun=9;HaplotypeScore=66.2584;InbreedingCoeff=0.4722;MQ=80.00;MQ0=1;MQRankSum=-0.526;QD=14.92;ReadPosRankSum=0.279;VQSLOD=5.0056;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:74.91:0,75,641	0/0:5,0:5:15:0,15,130	0/0:17,1:18:18.98:0,19,203	0/1:17,0:17:5.65:6,0,129	0/0:29,0:29:31.58:0,32,489	0/1:10,9:19:18.99:228,0,19	1/1:5,11:16:14.31:282,14,0	0/0:20,0:20:32.96:0,33,286	0/0:18,0:18:44.98:0,45,388	1/1:6,14:20:19.06:438,19,0	1/1:3,11:14:24.06:265,24,0	0/1:9,11:20:7.44:140,0,7	0/1:6,3:9:18.62:55,0,19	1/1:3,12:15:10.04:339,10,0	1/1:1,12:13:13.06:372,13,0	0/0:16,0:16:47.90:0,48,399	0/0:31,0:31:77.96:0,78,673	0/0:24,0:23:9.13:0,9,184	0/1:9,6:15:10.96:118,0,11	1/1:4,17:21:17.09:348,17,0	1/1:8,18:27:35.93:379,36,0	0/1:7,7:14:9.27:115,0,9	1/1:9,9:18:15.02:157,15,0	1/1:7,8:15:15.73:244,16,0	1/1:2,13:15:13.06:371,13,0	1/1:8,11:19:33.07:354,33,0	1/1:6,7:13:1.09:239,1,0	0/1:2,10:12:25.02:205,0,25
chr10	58880472	.	CATCCAGCCA	C	10454.42	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=15.797;DP=634;FS=6.273;HRun=0;HaplotypeScore=181.9311;InbreedingCoeff=0.9990;MQ=80.79;MQ0=0;MQRankSum=-16.404;QD=50.50;ReadPosRankSum=1.957;VQSLOD=4.3018;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:69.22:0,69,2947	0/0:11,0:11:33.11:0,33,1244	0/0:16,0:16:39.13:0,39,1699	0/0:24,0:24:42.45:0,42,2539	0/0:15,0:15:45.15:0,45,2086	1/1:1,18:19:39.04:1037,39,0	1/1:6,34:40:63.22:1854,63,0	0/0:20,0:20:51.17:0,51,2078	0/0:17,0:17:45.15:0,45,2039	0/0:18,0:18:51.18:0,51,2328	0/0:10,0:10:30.10:0,30,1264	1/1:1,32:33:71.98:1950,72,0	1/1:1,30:31:53.60:1633,54,0	0/0:31,0:31:93.31:0,93,4229	0/0:40,0:40:99:0,117,5506	0/0:25,0:25:72.25:0,72,3395	0/0:38,0:38:99:0,114,5224	1/1:10,23:33:51.09:1402,51,0	0/0:20,0:20:60.21:0,60,2637	0/0:19,0:19:48.62:0,49,2010	0/0:34,0:34:93.30:0,93,3957	1/1:1,10:11:24.08:726,24,0	1/1:2,12:14:26.93:817,27,0	1/1:5,21:26:38.60:1035,39,0	0/0:18,0:18:54.19:0,54,2408	0/0:25,0:25:72.24:0,72,3147	0/0:14,0:14:42.14:0,42,2022	0/0:8,0:8:24.08:0,24,1118
chr10	58885589	.	G	GATGTATGTATGTATGTATGT	26619.12	PASS	AB=1.000;AC=45;AF=0.804;AN=56;BaseQRankSum=7.201;DP=925;FS=0.000;HRun=0;HaplotypeScore=482.8018;InbreedingCoeff=0.8039;MQ=62.56;MQ0=2;MQRankSum=-8.095;QD=34.30;ReadPosRankSum=-2.875;VQSLOD=1.6484;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:51,0:51:21.84:22,0,3159	1/1:12,0:12:15.04:822,15,0	0/0:29,0:26:24.05:0,24,394	0/0:28,0:26:15.88:0,16,180	0/0:34,0:34:57.12:0,57,2150	1/1:36,0:36:21.03:837,21,0	1/1:31,0:33:5.49:185,5,0	1/1:59,0:59:81.25:2349,81,0	0/0:30,0:30:42.11:0,42,1574	1/1:42,0:42:98.69:3012,99,0	1/1:15,11:26:15.05:1298,15,0	1/1:35,0:36:30.03:932,30,0	1/1:33,0:34:39.02:1982,39,0	1/1:44,0:44:30.03:1412,30,0	1/1:18,17:37:12.04:1112,12,0	0/0:27,0:28:57.13:0,57,2189	1/1:30,0:31:23.98:959,24,0	1/1:15,0:15:14.95:408,15,0	1/1:28,0:29:37.68:1427,38,0	1/1:34,0:34:24.05:1394,24,0	1/1:40,0:40:27:804,27,0	1/1:38,0:38:15.02:587,15,0	1/1:23,0:24:10.68:408,11,0	1/1:25,0:25:12.02:594,12,0	1/1:18,17:38:18.06:1512,18,0	1/1:34,0:34:67.29:2907,67,0	1/1:20,21:41:15.52:1121,16,0	1/1:9,8:17:6.02:533,6,0
chr10	58886992	.	GGTGTGTGTGTATGTGTGT	G	2822.44	PASS	AB=1.000;AC=36;AF=0.643;AN=56;BaseQRankSum=4.202;DP=445;FS=0.000;HRun=0;HaplotypeScore=170.0725;InbreedingCoeff=0.7144;MQ=72.38;MQ0=24;MQRankSum=-2.251;QD=12.54;ReadPosRankSum=4.015;VQSLOD=2.0638;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:16:20.97:0,21,319	0/1:4,0:4:99:101,0,145	0/0:35,0:19:26.96:0,27,325	0/0:52,0:30:36.26:0,36,386	0/0:14,0:14:14.96:0,15,120	1/1:18,0:17:8.91:72,9,0	1/1:11,0:8:17.85:132,18,0	0/0:36,0:31:66.04:0,66,528	0/0:20,0:19:38.90:0,39,459	1/1:11,0:10:23.99:208,24,0	0/0:1,4:4:0:0,0,1	1/1:18,0:16:32.63:237,33,0	1/1:14,0:15:29.52:208,30,0	1/1:5,10:15:2.81:121,3,0	1/1:1,9:9:3.01:150,3,0	0/0:20,0:18:26.68:0,27,184	0/0:21,0:20:35.76:0,36,263	1/1:10,0:10:26.20:180,26,0	1/1:2,9:11:26.88:336,27,0	1/1:5,0:5:11.97:96,12,0	1/1:22,0:18:29.51:259,30,0	1/1:9,0:9:20.95:168,21,0	1/1:3,0:3:4.24:27,4,0	0/1:26,0:21:36.35:152,0,36	1/1:8,0:8:8.98:73,9,0	1/1:11,0:11:30.77:239,31,0	1/1:11,0:11:17.82:127,18,0	1/1:7,0:6:17.94:141,18,0
chr10	58887001	.	GTA	G	2521.70	PASS	AB=1.000;AC=38;AF=0.679;AN=56;BaseQRankSum=3.855;DP=403;FS=0.000;HRun=0;HaplotypeScore=64.7519;InbreedingCoeff=0.6889;MQ=62.64;MQ0=30;MQRankSum=-2.097;QD=10.51;ReadPosRankSum=1.192;VQSLOD=2.7105;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:19,0:18:40.93:41,0,134	0/0:3,0:3:6.85:0,7,47	0/0:33,0:17:27.15:0,27,327	0/0:44,0:22:36.11:0,36,386	0/0:11,4:14:14.96:0,15,120	1/1:12,0:11:8.98:72,9,0	1/1:9,1:7:17.85:132,18,0	0/0:29,0:24:68.33:0,68,540	0/1:22,0:20:41.84:42,0,229	1/1:10,0:8:23.99:208,24,0	0/0:5,0:4:0.94:0,1,1	1/1:17,0:15:32.63:237,33,0	1/1:13,0:13:29.75:216,30,0	1/1:12,0:11:2.66:17,3,0	1/1:11,0:9:2.97:20,3,0	0/0:16,0:14:27.16:0,27,184	0/0:18,0:16:35.77:0,36,266	1/1:10,0:9:26.20:180,26,0	1/1:9,0:9:26.84:207,27,0	1/1:4,0:4:11.97:96,12,0	1/1:20,0:15:29.80:236,30,0	1/1:9,0:9:20.95:168,21,0	1/1:2,0:2:4.24:27,4,0	1/1:25,0:20:29.79:223,30,0	1/1:6,0:6:8.98:73,9,0	1/1:11,0:11:32.81:253,33,0	1/1:11,0:11:17.82:127,18,0	1/1:7,0:6:17.94:141,18,0
chr10	58887123	.	G	GGGACATGAAAGAAAAGTTCCC	25431.05	PASS	AB=0.729;AC=54;AF=0.964;AN=56;BaseQRankSum=0.333;DP=203;FS=54.848;HRun=0;HaplotypeScore=260.6070;InbreedingCoeff=-0.0590;MQ=71.17;MQ0=0;MQRankSum=-3.267;QD=125.28;ReadPosRankSum=2.714;VQSLOD=2.4437;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,0:7:18.06:1302,18,0	1/1:3,0:3:9.03:255,9,0	0/1:2,0:5:7.62:571,0,8	0/1:8,1:10:69.21:511,0,69	1/1:5,0:5:12.04:585,12,0	1/1:8,0:8:18.02:1060,18,0	1/1:5,0:5:12.04:833,12,0	1/1:14,0:14:42.14:2447,42,0	1/1:4,0:4:9.92:491,10,0	1/1:10,0:10:18.53:618,19,0	1/1:6,0:6:15.05:912,15,0	1/1:6,0:6:15.05:729,15,0	1/1:7,0:7:12.04:742,12,0	1/1:7,0:7:18.06:1251,18,0	1/1:7,0:7:15.93:1040,16,0	1/1:8,0:8:24.04:1268,24,0	1/1:7,0:7:15.05:962,15,0	1/1:3,0:3:8.99:453,9,0	1/1:4,0:4:12.04:467,12,0	1/1:7,0:7:15.05:921,15,0	1/1:6,0:6:9:308,9,0	1/1:9,0:9:18.06:1195,18,0	1/1:8,0:8:23.87:1455,24,0	1/1:11,0:11:18.06:1138,18,0	1/1:10,0:10:21.06:1131,21,0	1/1:12,0:12:18.06:954,18,0	1/1:13,0:13:24.07:1714,24,0	1/1:1,0:1:3.01:118,3,0
chr10	58890565	.	C	CG	8465.23	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=14.938;DP=665;FS=2.566;HRun=7;HaplotypeScore=150.0079;InbreedingCoeff=0.9846;MQ=77.89;MQ0=0;MQRankSum=-1.400;QD=16.86;ReadPosRankSum=2.546;VQSLOD=3.3895;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:58:99:0,159,1530	1/1:8,0:8:17.94:147,18,0	0/0:20,0:20:38.95:0,39,362	0/0:15,0:15:26.96:0,27,305	0/0:24,0:24:60.09:0,60,579	1/1:21,0:21:50.56:353,51,0	1/1:29,0:29:66.71:483,67,0	1/1:22,0:22:20.82:184,21,0	0/0:29,0:29:69.10:0,69,666	1/1:26,0:26:58.60:374,59,0	1/1:7,0:7:17.91:148,18,0	1/1:23,2:25:47.48:389,47,0	1/1:22,0:22:54.92:415,55,0	1/1:21,1:22:53.68:414,54,0	1/1:31,0:31:80.43:589,80,0	0/0:17,0:17:51.08:0,51,492	1/1:33,1:34:77.62:679,78,0	1/1:20,2:22:56.80:466,57,0	1/1:13,0:13:13.83:88,14,0	1/1:23,0:23:41.75:328,42,0	1/1:47,0:47:99:758,110,0	1/1:21,0:21:44.79:364,45,0	1/1:15,3:18:50.83:436,51,0	1/1:43,0:43:98.31:732,98,0	1/1:23,2:25:59.70:484,60,0	1/1:10,0:10:23.71:176,24,0	1/1:25,0:24:50.60:373,51,0	1/1:8,0:8:11.92:86,12,0
chr10	58890571	.	G	GT	16947.91	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=13.157;DP=660;FS=2.437;HRun=0;HaplotypeScore=115.1386;InbreedingCoeff=0.9899;MQ=77.09;MQ0=0;MQRankSum=-4.002;QD=33.69;ReadPosRankSum=2.840;VQSLOD=4.5466;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:56:99:0,165,2247	1/1:0,6:7:18.06:254,18,0	0/0:17,0:17:48.04:0,48,621	0/0:18,0:18:40.77:0,41,513	0/0:21,0:21:63.20:0,63,860	1/1:4,23:27:42.17:749,42,0	1/1:1,31:32:65.22:975,65,0	1/1:3,20:23:52.16:685,52,0	0/0:27,0:27:75.22:0,75,1009	1/1:2,20:22:63.10:896,63,0	1/1:0,6:7:17.94:242,18,0	1/1:2,25:27:53.84:746,54,0	1/1:2,21:23:52.68:783,53,0	1/1:1,18:20:54.18:784,54,0	1/1:1,30:31:81.27:1198,81,0	0/0:18,0:18:54.17:0,54,738	1/1:2,39:42:86.72:1303,87,0	1/1:2,24:26:57.18:816,57,0	1/1:1,9:10:23.85:305,24,0	1/1:1,18:19:39.15:567,39,0	1/1:3,44:47:91.03:1633,91,0	1/1:1,18:19:48.11:673,48,0	1/1:4,15:19:51.12:705,51,0	1/1:0,41:41:99:1468,99,0	1/1:2,20:23:60.18:845,60,0	1/1:1,11:12:29.74:397,30,0	1/1:1,19:19:51.17:746,51,0	1/1:0,6:6:12.04:179,12,0
chr10	58891589	.	A	ACACAGTGAGTCAGG	55737.76	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-1.223;DP=655;FS=3.635;HRun=0;HaplotypeScore=270.0125;InbreedingCoeff=0.9545;MQ=78.65;MQ0=0;MQRankSum=-16.544;QD=113.06;ReadPosRankSum=4.193;VQSLOD=4.3194;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,154,5943	1/1:4,5:10:24.04:1420,24,0	0/0:25,0:25:66.18:0,66,2341	0/0:23,0:23:59.83:0,60,2116	0/0:19,0:19:57.18:0,57,2125	1/1:11,8:21:45.02:2481,45,0	1/1:22,12:37:78.27:4586,78,0	1/1:20,1:26:66.16:2999,66,0	0/0:23,0:23:69.24:0,69,2781	1/1:15,3:20:57.14:2576,57,0	1/1:8,3:16:9.03:629,9,0	1/1:9,17:31:66.06:4245,66,0	1/1:11,13:25:65.28:3898,65,0	1/1:11,21:33:81.28:5275,81,0	1/1:10,20:33:84.21:5036,84,0	0/0:18,0:18:54.19:0,54,2169	1/1:13,6:23:35.88:2275,36,0	1/1:8,6:15:33.11:2003,33,0	1/1:15,3:20:54.16:2296,54,0	1/1:10,6:18:24.51:1349,25,0	1/1:12,2:21:8.99:317,9,0	1/1:19,6:28:39.13:1962,39,0	1/1:11,1:14:6.02:245,6,0	1/1:13,9:26:30.57:1912,31,0	1/1:10,6:18:33.11:1898,33,0	1/1:15,1:19:25.18:2504,25,0	1/1:9,18:31:66.02:4340,66,0	1/1:1,7:8:24.04:1493,24,0
chr10	58892087	.	AC	A	10873.76	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=5.064;DP=599;FS=1.745;HRun=8;HaplotypeScore=62.7491;InbreedingCoeff=0.9858;MQ=85.18;MQ0=0;MQRankSum=-4.399;QD=23.38;ReadPosRankSum=2.969;VQSLOD=5.6828;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,108,1256	1/1:2,3:5:9.01:87,9,0	0/0:23,0:23:38.40:0,38,623	0/0:16,0:16:35.88:0,36,359	0/0:21,0:21:60.17:0,60,711	1/1:2,17:19:48.07:464,48,0	1/1:4,24:28:72.11:695,72,0	1/1:7,26:33:78.12:752,78,0	0/0:19,0:19:57.17:0,57,689	1/1:2,17:19:51.02:473,51,0	1/1:3,10:13:18.02:174,18,0	1/1:4,17:21:48.07:463,48,0	1/1:3,18:21:54.08:521,54,0	1/1:3,10:13:30.04:290,30,0	1/1:4,19:23:57.08:549,57,0	0/0:12,0:12:27.08:0,27,326	1/1:3,32:35:84.13:811,84,0	1/1:4,19:23:57.09:550,57,0	1/1:2,14:16:45.07:434,45,0	1/1:1,12:13:30.05:290,30,0	1/1:4,34:38:90.14:869,90,0	1/1:3,15:18:45.07:434,45,0	1/1:2,14:17:44.10:411,44,0	1/1:2,42:44:99:1101,114,0	1/1:1,13:14:30.05:290,30,0	1/1:1,19:20:57.09:550,57,0	1/1:1,17:18:42.06:405,42,0	1/1:2,12:14:27.04:261,27,0
chr10	58892235	.	C	CTT	5815.21	PASS	AB=0.909;AC=23;AF=0.411;AN=56;BaseQRankSum=-11.889;DP=548;FS=2.714;HRun=10;HaplotypeScore=82.5392;InbreedingCoeff=0.8797;MQ=72.41;MQ0=3;MQRankSum=0.512;QD=27.05;ReadPosRankSum=0.383;VQSLOD=5.0559;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:57.03:0,57,571	0/0:7,0:7:11.99:0,12,122	0/0:15,0:12:2.24:0,2,71	0/1:9,0:10:2.60:3,0,154	0/0:27,0:28:62.82:0,63,686	0/0:23,0:23:60.95:0,61,600	0/0:14,0:14:36.04:0,36,356	0/0:30,0:30:70.32:0,70,699	0/0:19,0:20:44.78:0,45,432	1/1:9,18:29:54.18:803,54,0	1/1:3,11:16:38.06:486,38,0	0/0:18,0:18:50.99:0,51,503	0/0:14,0:14:27.01:0,27,267	1/1:3,13:16:24.08:358,24,0	1/1:5,15:20:37.37:539,37,0	0/0:20,0:20:45.08:0,45,458	0/0:33,1:37:61.37:0,61,873	0/0:29,0:29:75.09:0,75,746	1/1:5,18:23:54.11:740,54,0	1/1:4,15:21:48.05:626,48,0	1/1:2,5:7:6.02:89,6,0	0/0:23,0:23:63.11:0,63,640	0/0:16,0:16:42.07:0,42,426	0/0:12,0:12:32.77:0,33,306	1/1:2,17:19:39.13:582,39,0	1/1:4,22:27:44.73:920,45,0	1/1:4,18:21:45.10:625,45,0	1/1:2,3:4:3.01:45,3,0
chr10	58892472	.	CT	C	5361.92	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=9.513;DP=384;FS=25.267;HRun=1;HaplotypeScore=74.5252;InbreedingCoeff=0.9378;MQ=86.27;MQ0=0;MQRankSum=-7.142;QD=19.29;ReadPosRankSum=-4.696;VQSLOD=2.7312;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:74.68:0,75,1087	1/1:1,0:1:3:26,3,0	0/0:16,0:16:48.15:0,48,706	0/0:13,1:14:33.02:0,33,448	0/0:9,0:9:18.06:0,18,273	1/1:6,7:13:32.92:274,33,0	1/1:5,11:16:34.38:266,34,0	1/1:10,6:16:32.71:254,33,0	0/0:16,0:16:48.14:0,48,697	1/1:8,8:16:38.70:334,39,0	1/1:8,2:10:14.33:116,14,0	1/1:6,6:12:27.83:228,28,0	1/1:2,3:5:11.54:97,12,0	1/1:9,5:15:36.31:295,36,0	1/1:6,15:21:53.77:438,54,0	0/0:18,0:18:54.05:0,54,790	1/1:20,10:30:78.26:742,78,0	1/1:11,0:11:15.24:165,15,0	1/1:7,8:15:39.03:320,39,0	1/1:6,7:13:29.94:252,30,0	1/1:8,9:17:32.91:278,33,0	1/1:4,5:9:23.53:190,24,0	1/1:0,4:9:11.62:97,12,0	1/1:7,2:9:23.08:196,23,0	1/1:6,10:16:34.08:272,34,0	1/1:4,9:13:29.92:255,30,0	1/1:1,5:6:17.92:146,18,0	1/1:2,3:5:14.96:123,15,0
chr10	58892474	.	CCG	C	6354.19	PASS	AB=1.000;AC=43;AF=0.768;AN=56;BaseQRankSum=9.113;DP=401;FS=42.964;HRun=0;HaplotypeScore=80.6322;InbreedingCoeff=0.8658;MQ=86.14;MQ0=0;MQRankSum=-5.546;QD=22.06;ReadPosRankSum=-3.969;VQSLOD=2.6456;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:92.89:0,93,1586	1/1:2,0:2:6:51,6,0	0/0:17,0:17:47.88:0,48,795	0/0:14,0:14:36.09:0,36,561	0/0:11,0:11:20.89:0,21,318	1/1:12,0:12:32.56:396,33,0	1/1:20,0:20:31.62:392,32,0	1/1:18,0:18:24.90:231,25,0	0/0:16,0:16:48.16:0,48,910	1/1:16,0:16:38.87:449,39,0	1/1:8,0:8:14.55:163,15,0	1/1:10,2:12:26.55:291,27,0	1/1:7,0:7:11.21:136,11,0	1/1:16,0:16:36.43:367,36,0	1/1:20,1:21:54.07:660,54,0	0/0:20,0:20:54.18:0,54,1012	1/1:30,0:30:54.22:422,54,0	0/1:10,0:10:8.69:9,0,32	1/1:14,1:15:33.60:345,34,0	1/1:12,1:13:24:277,24,0	1/1:16,2:18:33.04:371,33,0	1/1:9,0:9:20.57:266,21,0	1/1:8,1:9:8.95:111,9,0	1/1:9,0:9:21.44:222,21,0	1/1:15,1:16:33.54:403,34,0	1/1:16,0:16:33.04:391,33,0	1/1:6,0:6:17.98:214,18,0	1/1:5,0:5:15.01:187,15,0
chr10	58892475	.	CG	C	5474.31	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=8.868;DP=403;FS=29.895;HRun=1;HaplotypeScore=80.6481;InbreedingCoeff=0.9356;MQ=86.14;MQ0=0;MQRankSum=-5.682;QD=19.48;ReadPosRankSum=-4.061;VQSLOD=2.6900;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:96.67:0,97,1299	1/1:2,0:2:6:51,6,0	0/0:17,0:17:50.88:0,51,690	0/0:14,0:14:33.53:0,34,459	0/0:13,0:13:9.12:0,9,216	1/1:5,7:12:31.90:271,32,0	1/1:7,11:18:37.67:296,38,0	1/1:17,1:18:38.67:316,39,0	0/0:17,0:17:51.16:0,51,758	1/1:8,8:16:39.76:328,40,0	1/1:5,2:7:14.33:119,14,0	1/1:7,4:11:26.50:223,27,0	1/1:5,2:7:13.38:124,13,0	1/1:11,5:16:41.82:338,42,0	1/1:6,14:20:53.76:435,54,0	0/0:20,0:20:57.18:0,57,847	1/1:31,1:32:80.80:767,81,0	1/1:11,0:11:13.02:142,13,0	1/1:8,6:14:35.57:294,36,0	1/1:6,6:12:23.92:196,24,0	1/1:10,7:17:32.89:278,33,0	1/1:4,5:9:23.65:180,24,0	1/1:6,3:9:8.65:76,9,0	1/1:7,2:9:23.95:204,24,0	1/1:6,8:14:32.83:266,33,0	1/1:9,7:16:35.92:302,36,0	1/1:2,4:6:17.91:145,18,0	1/1:2,3:5:14.96:123,15,0
chr10	58893285	.	TTGTGTG	T	8789.31	PASS	AB=0.917;AC=32;AF=0.593;AN=54;BaseQRankSum=7.786;DP=663;FS=10.935;HRun=0;HaplotypeScore=174.9173;InbreedingCoeff=0.5867;MQ=62.73;MQ0=4;MQRankSum=-8.681;QD=21.23;ReadPosRankSum=-0.874;VQSLOD=3.9038;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:33:48.15:0,48,1386	0/0:17,0:17:12.91:0,13,268	0/0:20,0:12:2.80:0,3,13	./.	0/0:25,0:27:62.15:0,62,1369	1/1:28,0:28:6.15:347,6,0	0/1:28,0:27:8.77:150,0,9	0/0:30,0:30:42.06:0,42,704	0/0:3,0:18:32.26:0,32,380	1/1:11,18:31:61.05:1079,61,0	1/1:5,9:15:30.06:561,30,0	0/1:31,0:31:46.65:408,0,47	1/1:17,0:17:15.05:206,15,0	1/1:10,16:28:42.14:832,42,0	1/1:6,33:39:68.88:1418,69,0	0/0:16,0:36:12.02:0,12,254	0/0:30,0:28:14.97:0,15,246	0/0:21,0:20:26.08:0,26,465	0/1:8,7:16:7.81:243,0,8	1/1:3,14:20:18.98:621,19,0	1/1:12,6:18:6.02:104,6,0	1/1:23,0:23:13.12:353,13,0	1/1:25,0:25:4.05:305,4,0	0/1:14,0:14:84.30:96,0,84	1/1:9,19:28:35.99:701,36,0	1/1:8,9:18:5.16:434,5,0	1/1:10,20:30:38.55:808,39,0	1/1:1,3:3:6.02:125,6,0
chr10	58893303	.	GTGTGTGTGTGTGTGTT	G	6936.23	PASS	AB=0.715;AC=12;AF=0.214;AN=56;BaseQRankSum=3.372;DP=716;FS=4.150;HRun=0;HaplotypeScore=291.1721;InbreedingCoeff=0.7697;MQ=51.49;MQ0=14;MQRankSum=-7.214;QD=39.86;ReadPosRankSum=5.582;VQSLOD=3.6355;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:43:90.74:0,91,5174	0/0:17,0:17:35.82:0,36,869	0/0:32,0:15:32.26:0,32,778	0/0:27,0:11:19.85:0,20,453	0/0:36,0:35:96.30:0,96,4802	1/1:6,20:26:27.09:1201,27,0	0/1:12,13:24:29.60:528,0,30	0/0:31,0:31:72.19:0,72,3020	0/0:22,0:22:44.05:0,44,2216	0/0:31,0:30:69.24:0,69,2168	0/0:15,0:15:36.11:0,36,1032	1/1:14,20:34:36.12:1546,36,0	1/1:6,15:21:15.05:678,15,0	0/0:23,0:23:51.17:0,51,1394	0/0:44,0:44:93.76:0,94,2678	0/0:32,0:31:24.06:0,24,996	0/0:30,0:28:53.91:0,54,1588	0/0:19,0:18:51.13:0,51,2238	0/0:18,0:18:32.55:0,33,549	0/0:23,0:23:45.15:0,45,1403	0/0:16,0:15:15.59:0,16,306	1/1:6,19:25:30.06:1241,30,0	1/1:6,20:26:30.10:1250,30,0	0/1:12,5:17:99:493,0,154	0/0:24,0:24:45.07:0,45,1150	0/0:22,0:22:48.15:0,48,1419	0/0:30,0:29:59.97:0,60,1625	0/0:6,0:4:9.03:0,9,286
chr10	58893762	.	GT	G	7216.32	PASS	AB=1.000;AC=44;AF=0.786;AN=56;BaseQRankSum=12.924;DP=736;FS=2.061;HRun=1;HaplotypeScore=318.1644;InbreedingCoeff=-0.2751;MQ=70.36;MQ0=0;MQRankSum=-2.031;QD=9.80;ReadPosRankSum=12.472;VQSLOD=1.1092;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:40,0:40:33.30:320,0,33	0/1:5,0:5:8.50:49,0,9	0/1:20,0:20:18.94:19,0,194	0/1:21,0:21:69.48:86,0,69	1/1:31,0:31:64.72:361,65,0	1/1:21,1:22:9.71:241,10,0	0/1:27,0:27:46.21:201,0,46	0/1:36,0:36:12.23:349,0,12	1/1:33,0:33:1.09:297,1,0	1/1:26,1:27:75.33:435,75,0	1/1:16,1:17:31.93:196,32,0	0/1:39,0:39:23.69:396,0,24	1/1:29,0:29:18.38:330,18,0	1/1:28,1:29:7.65:323,8,0	1/1:36,0:36:27.21:387,27,0	1/1:36,0:36:81.74:461,82,0	0/1:22,0:22:9.50:199,0,10	1/1:11,0:11:30.15:137,30,0	0/1:25,0:25:18.89:195,0,19	1/1:23,1:24:45.50:255,46,0	0/1:47,0:46:16.15:257,0,16	1/1:23,0:23:44.40:237,44,0	1/1:20,0:20:40.07:233,40,0	0/1:23,0:22:46.48:141,0,46	1/1:20,0:20:25.24:207,25,0	1/1:27,0:27:74.40:368,74,0	0/1:30,0:29:5.51:325,0,6	1/1:16,0:16:41.43:212,41,0
chr10	58894520	.	G	GT	4094.68	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-11.601;DP=502;FS=0.414;HRun=7;HaplotypeScore=49.8136;InbreedingCoeff=0.9894;MQ=79.16;MQ0=0;MQRankSum=-1.415;QD=29.04;ReadPosRankSum=1.573;VQSLOD=4.1474;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:57.09:0,57,550	0/0:10,0:10:24.04:0,24,232	0/0:19,0:16:11.82:0,12,275	0/0:23,0:22:16.58:0,17,244	0/0:16,0:16:39.04:0,39,371	1/1:1,20:21:54.17:652,54,0	1/1:1,9:10:21.06:254,21,0	0/0:22,0:22:48.01:0,48,463	0/0:16,0:16:45.07:0,45,435	0/0:16,0:16:45.07:0,45,434	0/0:9,0:9:24.04:0,24,232	1/1:1,14:15:36.11:435,36,0	1/1:1,16:17:42.13:507,42,0	0/0:14,0:14:36.05:0,36,348	0/0:17,0:17:51.08:0,51,493	0/0:16,0:16:42.07:0,42,405	0/0:41,0:41:99:0,111,1065	1/1:7,23:30:66.20:797,66,0	0/0:17,0:17:45.07:0,45,434	0/0:14,0:14:27.03:0,27,261	0/0:17,0:17:48.07:0,48,458	1/1:2,11:13:30.09:362,30,0	1/1:0,8:8:24.07:290,24,0	1/1:3,24:27:66.20:797,66,0	0/0:18,0:18:54.07:0,54,515	0/0:25,0:25:63.04:0,63,608	0/0:19,0:19:45.07:0,45,434	0/0:11,0:11:18.02:0,18,174
chr10	58895072	.	TG	T	823.69	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.969;DP=430;FS=1.771;HRun=1;HaplotypeScore=41.9505;InbreedingCoeff=0.6897;MQ=69.78;MQ0=0;MQRankSum=0.418;QD=37.44;ReadPosRankSum=0.156;VQSLOD=3.5335;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:93.75:0,94,1459	0/0:3,0:3:9.03:0,9,144	0/0:3,0:3:9.03:0,9,124	0/0:8,0:7:6.09:0,6,227	0/0:14,0:14:39.13:0,39,623	0/0:15,0:15:45.15:0,45,719	0/0:36,0:36:99:0,108,1671	0/0:7,0:7:18.06:0,18,288	0/0:7,0:7:21.07:0,21,336	0/0:16,0:16:48.16:0,48,756	0/0:2,0:2:6.02:0,6,96	0/0:16,0:16:48.11:0,48,715	0/0:10,0:10:30.10:0,30,478	0/0:17,0:17:51.17:0,51,803	0/0:4,0:4:12.04:0,12,192	0/0:4,0:4:12.04:0,12,192	0/0:28,0:28:84.26:0,84,1315	1/1:0,22:22:66.22:918,66,0	0/0:22,0:22:63.20:0,63,964	0/0:4,0:4:12.04:0,12,192	0/0:54,0:54:99:0,163,2576	0/0:11,0:11:27.09:0,27,432	0/0:12,0:12:36.12:0,36,574	0/0:38,0:38:99:0,111,1676	0/0:8,0:8:24.08:0,24,381	0/0:20,0:20:60.19:0,60,934	0/0:10,0:10:30.10:0,30,477	0/0:7,0:7:21.07:0,21,334
chr10	58897597	.	TACTC	T	3758.70	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=6.402;DP=732;FS=5.171;HRun=0;HaplotypeScore=151.4640;InbreedingCoeff=0.9941;MQ=78.28;MQ0=1;MQRankSum=-4.117;QD=43.20;ReadPosRankSum=-1.137;VQSLOD=3.8170;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:54:99:0,160,4216	1/1:3,19:22:54.11:969,54,0	0/0:24,0:24:59.38:0,59,1555	0/0:15,0:15:41.88:0,42,1003	0/0:22,0:22:63.18:0,63,1645	0/0:12,0:12:17.99:0,18,386	0/0:28,0:28:33.11:0,33,828	1/1:4,30:34:90.25:1628,90,0	0/0:31,0:31:90.31:0,90,2430	0/0:34,0:34:99:0,102,2515	0/0:12,0:12:24.07:0,24,566	0/0:37,0:37:66.07:0,66,1585	0/0:25,0:25:57.09:0,57,1457	0/0:35,0:35:69.12:0,69,1614	0/0:32,0:32:62.84:0,63,1323	0/0:38,0:38:99:0,111,2844	1/1:1,30:30:60.21:1161,60,0	0/0:15,0:15:21.07:0,21,574	0/0:14,0:14:42.13:0,42,979	0/0:18,0:18:36.12:0,36,979	0/0:45,0:45:72.25:0,72,1895	0/0:29,0:29:72.15:0,72,1712	0/0:21,0:20:36.10:0,36,894	0/0:23,0:23:39.12:0,39,965	0/0:21,0:21:30:0,30,627	0/0:32,0:32:80.97:0,81,2044	0/0:18,0:18:39.13:0,39,1064	0/0:9,0:9:27.09:0,27,737
chr10	58897633	.	T	TTGGAGGGATGGC	33788.30	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-14.544;DP=775;FS=1.524;HRun=0;HaplotypeScore=191.6762;InbreedingCoeff=0.9531;MQ=76.81;MQ0=1;MQRankSum=-14.322;QD=66.78;ReadPosRankSum=0.181;VQSLOD=4.8063;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:62,0:62:99:0,165,5127	0/0:15,0:15:42.11:0,42,1139	0/0:26,0:26:54.02:0,54,1369	0/0:20,0:20:40.76:0,41,1145	0/0:16,0:16:39.13:0,39,1156	1/1:2,14:20:27.09:1627,27,0	1/1:3,18:26:24.08:1446,24,0	0/0:25,0:25:66.03:0,66,1545	0/0:35,0:35:93.29:0,93,2747	1/1:9,18:39:78.25:3099,78,0	1/1:2,11:17:9.03:541,9,0	1/1:6,28:42:63.22:3785,63,0	1/1:6,19:31:45.15:2696,45,0	1/1:3,24:36:44.73:2709,45,0	1/1:2,25:36:51.17:2933,51,0	0/0:36,0:36:96.27:0,96,3044	0/0:34,0:33:75.17:0,75,1978	1/1:2,7:14:6.02:362,6,0	1/1:1,14:26:69.15:2465,69,0	1/1:3,13:19:24.08:1141,24,0	1/1:11,20:46:30.04:1390,30,0	1/1:2,14:27:24.04:1443,24,0	1/1:4,17:28:20.79:1217,21,0	1/1:0,15:21:8.61:541,9,0	1/1:1,17:20:21.07:1235,21,0	1/1:3,23:33:81.26:3356,81,0	1/1:2,10:18:20.82:1262,21,0	1/1:1,3:6:9.03:543,9,0
chr10	58900069	.	GTTTTTT	G	14864.22	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=3.619;DP=535;FS=0.373;HRun=13;HaplotypeScore=134.1834;InbreedingCoeff=0.9419;MQ=50.81;MQ0=1;MQRankSum=-15.215;QD=42.71;ReadPosRankSum=6.298;VQSLOD=2.9611;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:33:84.29:0,84,2564	0/0:2,0:7:12.04:0,12,340	0/0:11,0:11:20.74:0,21,481	0/0:5,0:3:2.99:0,3,101	0/0:24,0:25:66.23:0,66,1991	1/1:2,14:16:33.08:646,33,0	1/1:2,18:20:39.03:763,39,0	0/0:9,0:29:78.26:0,78,2077	0/0:21,0:24:69.24:0,69,2133	1/1:3,18:20:48.11:904,48,0	1/1:3,14:17:36.07:704,36,0	1/1:1,19:20:45.13:881,45,0	1/1:1,19:20:42.10:822,42,0	1/1:0,15:15:39.13:763,39,0	1/1:0,23:23:54.15:1057,54,0	0/0:3,0:21:57.20:0,57,1301	0/0:10,0:29:48.15:0,48,1252	1/1:1,5:6:15.03:294,15,0	1/1:4,11:13:30.05:537,30,0	1/1:2,22:24:54.09:1057,54,0	1/1:2,6:7:8.99:176,9,0	1/1:2,16:18:45.13:881,45,0	1/1:2,22:24:54.16:1057,54,0	1/1:2,11:13:9.43:231,9,0	1/1:3,29:32:72.22:1409,72,0	1/1:1,19:20:54.16:981,54,0	1/1:3,28:31:75.21:1468,75,0	1/1:0,5:4:12.04:235,12,0
chr10	58900697	.	ATT	A	8604.93	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=7.772;DP=535;FS=5.851;HRun=11;HaplotypeScore=73.0433;InbreedingCoeff=0.9830;MQ=75.97;MQ0=0;MQRankSum=-1.398;QD=25.09;ReadPosRankSum=4.066;VQSLOD=4.8508;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:61.75:0,62,906	0/0:3,0:4:9.03:0,9,121	0/0:19,0:18:30.06:0,30,352	0/0:15,0:15:16.17:0,16,135	0/0:25,0:26:72.24:0,72,1089	1/1:0,18:18:45.11:479,45,0	1/1:3,25:28:66.16:702,66,0	0/0:25,0:26:65.68:0,66,936	0/0:14,0:14:33.10:0,33,487	1/1:1,16:17:45.09:470,45,0	1/1:3,20:25:50.99:598,51,0	1/1:1,19:20:48.12:511,48,0	1/1:2,9:11:21.04:222,21,0	1/1:2,16:18:48.10:511,48,0	1/1:1,10:12:32.80:331,33,0	0/0:1,0:20:44.92:0,45,154	0/0:39,0:41:99:0,117,1699	1/1:1,19:20:51.12:543,51,0	1/1:3,15:18:45.05:452,45,0	1/1:3,13:16:36.07:383,36,0	1/1:2,10:12:27.06:287,27,0	1/1:3,17:20:54.08:562,54,0	1/1:3,14:17:40.86:425,41,0	1/1:1,23:24:60.15:639,60,0	1/1:2,11:13:30.07:319,30,0	1/1:5,20:25:57.09:598,57,0	1/1:5,16:21:42.08:447,42,0	1/1:2,6:8:12.02:125,12,0
chr10	58900833	.	A	ATT	2965.94	PASS	AB=0.612;AC=15;AF=0.268;AN=56;BaseQRankSum=-4.058;DP=564;FS=1.938;HRun=11;HaplotypeScore=79.7581;InbreedingCoeff=0.8767;MQ=77.10;MQ0=5;MQRankSum=-0.440;QD=21.34;ReadPosRankSum=0.878;VQSLOD=3.3001;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:35:63.09:0,63,273	0/0:5,0:6:5.94:0,6,108	0/0:34,1:21:21.12:0,21,167	0/0:38,0:22:19.16:0,19,155	0/0:3,0:23:52.12:0,52,225	1/1:5,10:16:30.09:413,30,0	1/1:6,11:20:40.60:496,41,0	0/0:26,0:27:53.67:0,54,502	0/0:8,0:9:11.95:0,12,166	0/0:8,0:8:15:0,15,145	0/0:18,0:19:53.82:0,54,506	1/1:5,13:19:44.58:588,45,0	1/1:2,5:7:9.03:130,9,0	0/0:17,0:17:42.02:0,42,407	0/0:15,0:15:45.07:0,45,436	0/0:17,0:18:44.77:0,45,413	0/0:27,0:27:60.03:0,60,582	0/1:11,1:30:11.50:129,0,12	0/0:20,0:22:34.42:0,34,379	0/0:31,0:32:77.82:0,78,739	0/0:10,0:10:21.01:0,21,204	1/1:3,9:14:29.42:375,29,0	1/1:2,14:19:44.62:569,45,0	1/1:2,11:14:33.11:463,33,0	0/0:13,0:14:35.76:0,36,332	0/0:24,0:25:62.80:0,63,587	0/0:18,0:19:35.96:0,36,399	0/0:24,0:24:57.05:0,57,547
chr10	58904789	.	GACACACACACAC	G	1216.19	PASS	AB=0.870;AC=21;AF=0.438;AN=48;BaseQRankSum=3.868;DP=487;FS=16.559;HRun=0;HaplotypeScore=154.3026;InbreedingCoeff=0.5060;MQ=70.76;MQ0=16;MQRankSum=-2.992;QD=7.15;ReadPosRankSum=-0.331;VQSLOD=1.8953;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:21.07:0,21,581	0/0:4,0:4:6.02:0,6,147	./.	./.	0/0:12,0:12:3.01:0,3,48	0/0:13,0:13:5.85:0,6,51	0/0:20,0:18:5.99:0,6,48	0/0:20,0:18:1.55:0,2,4	0/0:16,0:16:18.06:0,18,689	1/1:17,0:16:1.30:26,1,0	./.	0/0:16,0:17:12.37:0,12,106	1/1:8,0:10:4.41:14,4,0	1/1:13,3:16:6.02:132,6,0	1/1:11,5:16:17.14:444,17,0	0/1:17,3:19:99:195,0,152	0/0:18,0:22:30.46:0,30,867	0/0:24,0:21:6.91:0,7,78	1/1:11,2:13:4.42:155,4,0	1/1:9,1:9:3.01:102,3,0	1/1:36,0:35:9:80,9,0	0/0:9,0:9:0.47:0,0,1	0/0:7,0:6:3.01:0,3,38	0/0:25,0:26:2.82:0,3,38	./.	1/1:12,0:11:6.01:62,6,0	1/1:11,0:11:5.63:58,6,0	1/1:6,3:8:3.01:102,3,0
chr10	58904930	.	TGCCTC	T	10771.70	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=13.659;DP=668;FS=6.969;HRun=0;HaplotypeScore=137.2262;InbreedingCoeff=0.9972;MQ=89.94;MQ0=0;MQRankSum=-7.376;QD=44.15;ReadPosRankSum=4.400;VQSLOD=4.3474;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,114,3323	1/1:1,5:6:15.05:311,15,0	0/0:31,0:31:78.26:0,78,2160	0/0:24,0:24:46.56:0,47,1491	0/0:18,0:18:54.19:0,54,1650	1/1:1,15:16:33.08:636,33,0	1/1:4,19:22:36.12:746,36,0	1/1:7,17:24:48.11:833,48,0	0/0:29,0:29:78.27:0,78,2322	0/0:27,0:27:81.28:0,81,2410	0/0:13,0:13:33.11:0,33,967	1/1:0,33:33:81.28:1679,81,0	1/1:1,27:28:78.27:1617,78,0	0/0:32,0:32:81.28:0,81,2455	0/0:31,0:31:87.30:0,87,2605	0/0:28,0:28:84.29:0,84,2559	1/1:0,26:26:60.21:1244,60,0	1/1:2,14:16:29.11:620,29,0	0/0:19,0:18:48.16:0,48,1418	0/0:10,0:10:24.08:0,24,724	0/0:27,0:27:69.24:0,69,2054	1/1:1,12:13:33.03:600,33,0	1/1:2,20:21:39.61:809,40,0	1/1:4,33:37:81.28:1679,81,0	0/0:23,0:23:66.23:0,66,2026	0/0:26,0:26:75.21:0,75,2198	0/0:27,0:27:75.26:0,75,2288	0/0:15,0:15:36.12:0,36,1106
chr10	58906632	.	CT	C	958.16	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=2.932;DP=714;FS=0.000;HRun=9;HaplotypeScore=91.7186;InbreedingCoeff=0.9518;MQ=63.04;MQ0=7;MQRankSum=-3.718;QD=15.97;ReadPosRankSum=-0.951;VQSLOD=3.5205;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,129,1466	1/1:2,6:8:18.01:164,18,0	0/0:22,0:9:15.04:0,15,165	0/0:27,0:11:9.48:0,9,93	0/0:38,0:38:99:0,99,1112	0/0:23,0:23:51.15:0,51,586	0/0:22,0:22:45.06:0,45,478	1/1:13,19:31:42.48:551,42,0	0/0:21,0:21:57.15:0,57,648	0/0:35,0:35:84.22:0,84,953	0/0:16,0:16:39.11:0,39,447	0/0:37,0:37:78.20:0,78,876	0/0:24,0:23:42.59:0,43,480	0/0:20,1:21:29.78:0,30,587	0/0:24,0:25:63.01:0,63,698	0/0:26,0:26:69.19:0,69,787	1/1:5,15:20:41.89:384,42,0	0/0:20,0:20:36.10:0,36,415	0/0:24,0:23:54.16:0,54,623	0/0:20,0:20:57.15:0,57,641	0/0:19,0:19:36.07:0,36,384	0/0:21,0:21:47.98:0,48,554	0/0:17,1:18:8.75:0,9,353	0/0:31,1:32:76.36:0,76,882	0/0:20,0:20:45.12:0,45,510	0/0:48,0:48:99:0,120,1366	0/0:29,0:28:75.21:0,75,853	0/0:18,0:17:36.11:0,36,415
chr10	58906658	.	C	CT	7813.12	PASS	AB=0.550;AC=43;AF=0.768;AN=56;BaseQRankSum=-6.993;DP=677;FS=13.496;HRun=10;HaplotypeScore=72.2413;InbreedingCoeff=0.7302;MQ=56.30;MQ0=16;MQRankSum=-2.228;QD=16.35;ReadPosRankSum=0.804;VQSLOD=4.1317;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:91.96:0,92,936	1/1:0,4:5:14.87:142,15,0	0/0:32,0:7:2.89:0,3,73	0/0:31,0:11:15.87:0,16,88	0/0:33,0:33:83.87:0,84,689	1/1:2,16:18:17.92:363,18,0	1/1:4,8:12:15.04:160,15,0	1/1:9,14:22:29.39:445,29,0	0/0:23,0:23:56.92:0,57,468	1/1:7,21:30:54.91:570,55,0	1/1:3,9:13:2.12:194,2,0	1/1:9,27:36:7.64:494,8,0	1/1:7,13:19:5.03:260,5,0	1/1:5,9:15:26.90:268,27,0	1/1:5,18:23:14.48:359,14,0	0/0:29,0:29:68.89:0,69,566	1/1:12,10:22:6.03:285,6,0	1/1:5,13:16:5.43:263,5,0	1/1:7,10:16:30.07:316,30,0	1/1:4,15:19:12.71:345,13,0	1/1:5,12:16:30.08:320,30,0	1/1:4,15:19:39.06:402,39,0	1/1:4,17:21:24.06:256,24,0	1/1:7,28:34:2.92:602,3,0	0/1:4,18:22:4.18:368,0,4	1/1:13,29:43:34.86:761,35,0	1/1:9,24:32:25.65:513,26,0	1/1:9,4:12:12.03:128,12,0
chr10	58907355	.	CA	C	190.80	PASS	AB=0.958;AC=25;AF=0.625;AN=40;BaseQRankSum=4.012;DP=137;FS=0.000;HRun=1;HaplotypeScore=29.9937;InbreedingCoeff=0.2961;MQ=25.44;MQ0=24;MQRankSum=1.279;QD=2.98;ReadPosRankSum=0.426;VQSLOD=-0.7445;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	./.	0/1:6,0:6:6.87:27,0,7	1/1:9,0:7:0.30:8,0,0	0/0:8,0:8:20.96:0,21,247	0/0:8,0:5:3.28:0,3,9	1/1:1,1:2:5.88:53,6,0	0/0:1,1:1:0:0,0,0	0/1:6,1:6:12.32:12,0,29	0/1:6,0:6:34.62:35,0,69	1/1:1,0:1:3:29,3,0	1/1:2,0:2:2.04:6,2,0	0/0:11,0:11:10.25:0,10,92	0/0:14,0:8:15.05:0,15,182	0/0:4,0:4:9.03:0,9,118	1/1:4,0:2:2.83:15,3,0	./.	1/1:8,1:5:0.74:3,1,0	1/1:3,0:3:2.84:8,3,0	1/1:6,0:4:3.91:11,4,0	./.	1/1:3,0:2:5.92:42,6,0	1/1:4,0:3:7.75:56,8,0	1/1:2,0:2:2.17:14,2,0	./.
chr10	58907357	.	CA	C	443.47	PASS	AB=0.929;AC=26;AF=0.650;AN=40;BaseQRankSum=4.249;DP=128;FS=0.000;HRun=1;HaplotypeScore=27.6081;InbreedingCoeff=0.3526;MQ=25.05;MQ0=24;MQRankSum=0.916;QD=7.27;ReadPosRankSum=-0.403;VQSLOD=0.2035;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	./.	1/1:4,1:5:9:88,9,0	1/1:7,1:6:0.51:23,1,0	0/0:6,0:6:18.06:0,18,234	0/0:8,0:5:3.06:0,3,7	1/1:2,0:2:5.88:46,6,0	0/0:2,0:1:0:0,0,0	0/1:7,0:6:26.45:26,0,29	0/1:5,1:6:60.31:92,0,60	1/1:0,1:1:3.01:38,3,0	1/1:2,0:2:2.04:6,2,0	0/0:10,0:10:7.57:0,8,80	0/0:13,0:7:15.04:0,15,176	0/0:4,0:4:8.92:0,9,101	1/1:3,0:1:2.88:15,3,0	./.	1/1:9,0:5:2.30:18,2,0	1/1:2,0:2:3.46:24,3,0	1/1:5,1:4:2.27:6,2,0	./.	1/1:1,2:2:6.02:76,6,0	1/1:0,4:3:8.92:82,9,0	1/1:0,3:3:6.25:33,6,0	./.
chr10	58907359	.	CA	C	444.33	PASS	AB=0.789;AC=23;AF=0.639;AN=36;BaseQRankSum=4.852;DP=119;FS=0.000;HRun=1;HaplotypeScore=26.6980;InbreedingCoeff=0.2301;MQ=25.20;MQ0=21;MQRankSum=0.610;QD=7.05;ReadPosRankSum=-1.376;VQSLOD=-0.0378;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	./.	1/1:2,3:5:8.51:87,9,0	1/1:6,1:5:0.51:35,1,0	0/0:6,0:6:18.06:0,18,233	0/0:7,0:4:2.44:0,2,6	1/1:1,0:1:2.94:18,3,0	0/0:2,0:1:0:0,0,0	0/1:4,3:6:26.24:40,0,26	0/1:3,3:6:56.97:133,0,57	1/1:1,0:1:3.01:32,3,0	./.	0/1:10,0:10:10.41:10,0,57	0/0:13,0:7:14.99:0,15,164	0/0:4,0:4:6.02:0,6,85	./.	./.	1/1:6,3:5:2.56:32,3,0	1/1:0,2:2:2.98:39,3,0	1/1:3,3:4:1.01:4,1,0	./.	1/1:2,0:2:5.50:44,6,0	1/1:4,0:3:8.78:58,9,0	1/1:3,0:3:6.25:33,6,0	./.
chr10	58910766	.	G	GACACACACACAC	9932.42	PASS	AC=42;AF=0.808;AN=52;BaseQRankSum=1.250;DP=659;FS=6.722;HRun=0;HaplotypeScore=232.6154;InbreedingCoeff=0.6684;MQ=63.49;MQ0=7;MQRankSum=-5.955;QD=20.44;ReadPosRankSum=-3.704;VQSLOD=2.2355;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:41:62.95:0,63,1689	1/1:8,0:8:6.02:229,6,0	0/0:35,0:21:3.01:0,3,71	0/0:26,0:15:2.09:0,2,24	0/0:14,0:17:33.01:0,33,985	./.	1/1:45,0:44:12.02:199,12,0	1/1:24,0:24:27.04:719,27,0	0/0:21,0:24:30.07:0,30,775	1/1:25,0:25:42.94:1308,43,0	./.	1/1:21,9:30:14.88:687,15,0	1/1:16,0:23:15.05:605,15,0	1/1:27,0:27:18.46:396,18,0	1/1:18,8:26:6:197,6,0	1/1:17,0:18:18.06:699,18,0	1/1:32,0:30:24.08:811,24,0	1/1:14,7:20:12.04:465,12,0	1/1:11,0:11:13.27:289,13,0	1/1:14,0:14:2.45:91,2,0	1/1:40,0:39:15.10:365,15,0	1/1:18,0:16:3.48:70,3,0	1/1:10,9:18:0.47:1,0,0	1/1:25,0:40:15.45:384,15,0	1/1:8,0:10:3.01:135,3,0	1/1:29,0:29:59.56:1659,60,0	1/1:7,0:19:17.25:524,17,0	1/1:6,0:5:3.01:99,3,0
chr10	58911149	.	GTCAACA	G	14114.42	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=17.021;DP=627;FS=4.761;HRun=0;HaplotypeScore=141.3339;InbreedingCoeff=0.9744;MQ=93.54;MQ0=0;MQRankSum=-15.489;QD=51.70;ReadPosRankSum=0.130;VQSLOD=4.7273;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,151,5005	1/1:0,8:8:21.07:474,21,0	0/0:35,0:35:96.33:0,96,2860	0/0:29,0:29:74.92:0,75,2120	0/0:21,0:21:63.22:0,63,2157	0/0:16,0:16:48.16:0,48,1579	0/0:31,0:31:90.31:0,90,2859	1/1:0,20:20:60.19:1311,60,0	0/0:24,0:24:69.24:0,69,2186	1/1:1,30:31:87.28:1850,87,0	1/1:2,13:15:27.09:557,27,0	0/0:17,0:17:51.18:0,51,1782	0/0:20,0:20:57.20:0,57,1923	1/1:0,15:15:33.11:762,33,0	1/1:0,31:31:69.24:1629,69,0	0/0:19,0:19:51.17:0,51,1541	1/1:2,24:26:57.20:1304,57,0	0/0:26,0:26:78.27:0,78,2764	1/1:3,22:25:66.23:1449,66,0	1/1:0,14:14:33.11:747,33,0	1/1:0,19:19:19.71:391,20,0	0/0:25,0:24:69.24:0,69,2211	0/0:20,0:20:57.20:0,57,1910	0/0:19,0:19:57.20:0,57,1947	1/1:0,14:14:24.08:548,24,0	1/1:1,27:28:74.30:1646,74,0	1/1:1,25:26:60.21:1375,60,0	1/1:0,1:1:3.01:72,3,0
chr10	58913292	.	C	CTT	3162.59	PASS	AB=0.587;AC=26;AF=0.464;AN=56;BaseQRankSum=10.301;DP=612;FS=6.240;HRun=9;HaplotypeScore=89.9063;InbreedingCoeff=0.7937;MQ=81.36;MQ0=0;MQRankSum=-1.176;QD=10.20;ReadPosRankSum=0.199;VQSLOD=0.9135;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:84.12:0,84,865	1/1:4,9:14:27.09:416,27,0	0/0:18,0:18:4.10:0,4,116	0/0:16,0:18:35.36:0,35,334	0/0:27,0:27:66.08:0,66,682	0/0:21,0:21:60.13:0,60,638	0/0:25,0:26:59.84:0,60,608	1/1:8,19:30:63.14:861,63,0	0/0:10,0:10:27.07:0,27,287	1/1:3,0:24:52.33:205,52,0	1/1:4,0:28:25.85:156,26,0	0/0:11,0:11:27.05:0,27,287	0/0:23,0:23:63.11:0,63,651	1/1:0,0:13:27.45:94,27,0	1/1:3,0:23:15.99:122,16,0	0/0:24,0:24:51.07:0,51,543	1/1:2,17:20:44.64:655,45,0	0/0:25,0:26:66.09:0,66,747	0/1:8,0:22:23.04:79,0,23	1/1:4,0:18:5.83:88,6,0	0/1:2,0:9:13.95:33,0,14	0/0:20,0:21:36:0,36,438	0/0:24,0:25:45.02:0,45,527	0/0:20,0:20:57.14:0,57,607	1/1:4,0:28:59.89:206,60,0	1/1:7,0:32:65.10:246,65,0	1/1:8,0:36:2.05:142,2,0	1/1:3,0:13:22.46:77,22,0
chr10	58914395	.	G	GA	3574.83	PASS	AB=0.695;AC=44;AF=0.786;AN=56;BaseQRankSum=3.538;DP=515;FS=3.773;HRun=13;HaplotypeScore=104.5859;InbreedingCoeff=0.5255;MQ=54.45;MQ0=4;MQRankSum=-1.913;QD=7.98;ReadPosRankSum=-3.990;VQSLOD=2.0037;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:34.14:0,34,222	1/1:4,0:12:14.91:87,15,0	0/0:3,0:3:7.97:0,8,47	0/1:7,1:8:6.09:13,0,6	0/0:12,0:15:20.92:0,21,120	1/1:6,9:16:3.28:161,3,0	1/1:11,6:15:14.97:131,15,0	1/1:16,0:18:23.98:128,24,0	0/0:14,0:16:33.78:0,34,217	1/1:13,1:25:26.15:157,26,0	1/1:9,1:24:24.77:130,25,0	1/1:7,20:28:43.10:375,43,0	1/1:5,12:18:25.06:203,25,0	1/1:24,0:26:38.68:229,39,0	1/1:5,0:11:11.42:59,11,0	1/1:6,18:25:17.62:336,18,0	1/1:10,0:19:25.66:131,26,0	0/1:6,16:22:2.12:267,0,2	1/1:16,0:17:16.09:96,16,0	1/1:10,0:25:31.61:169,32,0	1/1:4,0:4:0.47:1,0,0	1/1:11,13:26:2.42:157,2,0	0/1:10,11:22:32.01:152,0,32	0/1:6,7:14:44.44:45,0,44	1/1:8,1:23:28.52:145,29,0	1/1:7,2:19:31.92:182,32,0	1/1:16,0:18:26.44:141,26,0	1/1:7,0:6:14.48:80,14,0
chr10	58919046	.	A	ACTG	21035.06	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=5.420;DP=773;FS=1.881;HRun=0;HaplotypeScore=147.6203;InbreedingCoeff=0.9976;MQ=87.97;MQ0=0;MQRankSum=-12.366;QD=60.79;ReadPosRankSum=0.571;VQSLOD=5.7681;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,141,2552	1/1:0,11:11:33.11:806,33,0	0/0:28,0:28:78.19:0,78,1286	0/0:35,0:34:78.67:0,79,1439	0/0:23,0:23:69.22:0,69,1246	0/0:29,0:29:84.24:0,84,1471	0/0:35,0:35:99:0,105,1704	1/1:1,39:40:99:2733,117,0	0/0:37,0:37:99:0,108,1939	1/1:0,22:23:66.23:1594,66,0	1/1:0,9:10:27.09:640,27,0	0/0:29,0:29:84.29:0,84,1560	0/0:32,0:32:96.27:0,96,1691	1/1:0,32:35:84.10:2025,84,0	1/1:0,35:36:93.32:2259,93,0	0/0:35,0:35:99:0,105,1925	1/1:0,32:32:78.27:1918,78,0	0/0:19,0:19:57.15:0,57,1017	1/1:1,10:13:38.93:816,39,0	1/1:1,26:28:16.25:1486,16,0	1/1:0,21:22:48.16:1160,48,0	0/0:29,0:29:87.23:0,87,1457	0/0:13,0:13:39.13:0,39,727	0/0:35,0:35:99:0,102,1846	1/1:0,35:35:93.32:2233,93,0	1/1:0,22:25:72.18:1559,72,0	1/1:1,19:21:54.19:1308,54,0	1/1:1,11:15:21.07:498,21,0
chr10	58920376	.	TC	T	11374.22	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=22.188;DP=803;FS=0.000;HRun=2;HaplotypeScore=127.2193;InbreedingCoeff=0.9995;MQ=76.09;MQ0=0;MQRankSum=-5.296;QD=32.04;ReadPosRankSum=1.307;VQSLOD=4.3122;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,114,1705	1/1:1,12:13:30.10:385,30,0	0/0:20,0:20:54.18:0,54,781	0/0:31,0:31:89.97:0,90,1225	0/0:24,0:24:72.23:0,72,1056	0/0:32,0:32:96.31:0,96,1418	0/0:36,0:36:99:0,108,1554	1/1:2,37:39:99:1317,111,0	0/0:34,0:34:99:0,102,1466	1/1:0,27:27:81.26:1038,81,0	1/1:0,9:9:27.03:327,27,0	0/0:37,0:37:99:0,111,1660	0/0:36,0:36:99:0,108,1557	1/1:0,25:25:56.82:735,57,0	1/1:0,36:36:96.31:1238,96,0	0/0:43,0:43:99:0,126,1838	1/1:0,39:39:96.24:1219,96,0	0/0:31,0:31:93.27:0,93,1347	1/1:1,17:18:51.13:618,51,0	1/1:2,23:25:69.14:852,69,0	1/1:6,22:28:51.16:657,51,0	0/0:21,0:21:63.21:0,63,931	0/0:15,0:15:42.14:0,42,626	0/0:47,0:47:99:0,132,1935	1/1:0,25:25:72.19:911,72,0	1/1:4,21:25:66.19:820,66,0	1/1:0,29:29:75.24:966,75,0	1/1:0,17:17:24.04:290,24,0
chr10	58920932	.	G	GA	941.94	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=10.690;DP=666;FS=18.237;HRun=1;HaplotypeScore=81.3070;InbreedingCoeff=0.9958;MQ=87.32;MQ0=0;MQRankSum=-10.598;QD=18.11;ReadPosRankSum=-2.196;VQSLOD=2.2661;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,132,1698	1/1:1,5:6:17.92:157,18,0	0/0:28,0:28:78.17:0,78,952	0/0:21,0:21:57.12:0,57,697	0/0:17,0:17:51.17:0,51,661	0/0:23,0:23:69.21:0,69,881	0/0:30,0:30:84.25:0,84,1074	1/1:11,19:30:36.27:626,36,0	0/0:19,0:19:57.19:0,57,740	0/0:26,0:26:78.25:0,78,1013	0/0:14,0:14:42.14:0,42,545	0/0:34,0:34:99:0,99,1270	0/0:27,0:27:81.25:0,81,1037	0/0:32,0:32:96.30:0,96,1229	0/0:29,0:29:87.27:0,87,1115	0/0:33,0:33:96.31:0,96,1247	1/1:6,10:16:22.26:299,22,0	0/0:23,0:23:69.18:0,69,877	0/0:20,0:20:60.19:0,60,778	0/0:16,0:16:48.16:0,48,623	0/0:42,0:42:99:0,126,1636	0/0:20,0:20:57.18:0,57,738	0/0:14,0:14:39.13:0,39,506	0/0:25,0:25:75.23:0,75,960	0/0:18,0:18:54.18:0,54,701	0/0:20,0:20:60.20:0,60,779	0/0:19,0:19:51.17:0,51,662	0/0:19,0:19:57.17:0,57,725
chr10	58920934	.	T	TGTTTG	4130.98	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=10.311;DP=678;FS=11.065;HRun=0;HaplotypeScore=131.5424;InbreedingCoeff=0.9971;MQ=86.27;MQ0=0;MQRankSum=-9.268;QD=70.02;ReadPosRankSum=-3.730;VQSLOD=3.5371;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,138,3109	1/1:3,5:8:18.06:473,18,0	0/0:27,0:27:81.01:0,81,1651	0/0:20,0:20:57.18:0,57,1196	0/0:17,0:17:51.16:0,51,1140	0/0:23,0:23:66.23:0,66,1511	0/0:29,0:29:84.29:0,84,1919	1/1:14,19:33:95.90:2438,96,0	0/0:20,0:20:57.20:0,57,1327	0/0:27,0:27:78.27:0,78,1807	0/0:17,0:17:42.13:0,42,901	0/0:33,0:33:96.33:0,96,2234	0/0:26,0:26:78.27:0,78,1790	0/0:32,0:32:96.33:0,96,2223	0/0:29,0:29:84.29:0,84,1944	0/0:33,0:33:99:0,99,2253	1/1:8,10:18:48.10:1220,48,0	0/0:23,0:23:69.24:0,69,1593	0/0:20,0:20:60.21:0,60,1361	0/0:16,0:16:48.16:0,48,1107	0/0:42,0:42:99:0,126,2928	0/0:20,0:20:60.21:0,60,1359	0/0:14,0:14:39.13:0,39,876	0/0:25,0:25:72.25:0,72,1650	0/0:20,0:20:54.19:0,54,1257	0/0:20,0:20:60.21:0,60,1386	0/0:20,0:20:57.19:0,57,1259	0/0:19,0:19:57.20:0,57,1316
chr10	58925315	.	A	AC	16625.30	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=7.001;DP=818;FS=3.082;HRun=6;HaplotypeScore=115.5796;InbreedingCoeff=0.9913;MQ=88.13;MQ0=3;MQRankSum=-5.009;QD=24.85;ReadPosRankSum=6.023;VQSLOD=3.7264;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,129,1295	1/1:0,9:9:27.09:336,27,0	0/0:30,0:30:72.12:0,72,719	0/0:30,0:30:62.72:0,63,686	0/0:15,0:15:42.08:0,42,421	1/1:6,1:29:48.46:246,48,0	1/1:6,2:38:71.16:363,71,0	1/1:3,35:38:99:1251,105,0	0/0:24,0:24:69.12:0,69,690	1/1:0,24:24:72.23:905,72,0	1/1:2,10:12:30.10:377,30,0	1/1:5,0:42:94.17:481,94,0	1/1:2,2:34:79.68:406,80,0	1/1:6,36:42:99:1283,102,0	1/1:1,29:30:84.27:1057,84,0	1/1:5,28:33:78.25:981,78,0	1/1:6,24:30:66.21:827,66,0	1/1:4,29:33:72.23:904,72,0	1/1:3,22:25:66.10:763,66,0	1/1:2,19:21:57.18:714,57,0	1/1:4,56:60:99:1799,144,0	1/1:1,0:23:59.93:304,60,0	1/1:1,0:8:19.89:101,20,0	1/1:4,0:36:85.53:435,86,0	1/1:4,23:27:60.19:754,60,0	1/1:2,34:36:86.32:1167,86,0	1/1:3,28:31:81.26:1018,81,0	1/1:0,5:5:12.04:151,12,0
chr10	58927646	.	G	GC	4221.84	PASS	AB=0.542;AC=7;AF=0.125;AN=56;BaseQRankSum=-13.675;DP=729;FS=2.927;HRun=1;HaplotypeScore=75.0124;InbreedingCoeff=0.8735;MQ=92.81;MQ0=0;MQRankSum=-0.292;QD=39.83;ReadPosRankSum=0.604;VQSLOD=5.4858;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,135,1737	0/1:2,11:13:5.84:415,0,6	0/0:36,0:36:93.77:0,94,1195	0/0:29,0:29:72.16:0,72,904	0/0:28,0:28:81.26:0,81,1052	0/0:23,0:23:66.20:0,66,843	0/0:31,0:31:93.30:0,93,1207	1/1:2,29:31:87.25:1244,87,0	0/0:27,0:27:81.25:0,81,1038	0/0:34,0:34:99:0,99,1260	0/0:17,0:17:51.17:0,51,660	0/0:45,0:45:99:0,132,1713	0/0:24,0:24:63.20:0,63,818	0/0:23,0:23:63.20:0,63,817	0/0:29,0:29:81.26:0,81,1050	0/0:32,0:32:93.30:0,93,1207	1/1:1,35:36:99:1483,99,0	1/1:0,26:26:72.24:1079,72,0	0/0:27,0:27:78.24:0,78,999	0/0:12,0:12:33.11:0,33,425	0/0:28,0:28:84.26:0,84,1076	0/0:23,0:23:63.67:0,64,805	0/0:16,0:16:45.15:0,45,584	0/0:21,0:21:54.05:0,54,701	0/0:21,0:21:60.19:0,60,779	0/0:22,0:22:66.21:0,66,857	0/0:19,0:19:54.18:0,54,700	0/0:11,0:11:33.11:0,33,429
chr10	58928828	.	ACT	A	3732.32	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=9.551;DP=693;FS=1.913;HRun=0;HaplotypeScore=84.8891;InbreedingCoeff=0.9855;MQ=88.73;MQ0=1;MQRankSum=-1.990;QD=41.01;ReadPosRankSum=-0.666;VQSLOD=5.2801;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:58:99:0,175,3249	1/1:0,7:7:21.07:309,21,0	0/0:26,0:26:75.25:0,75,1339	0/0:25,0:25:75.23:0,75,1265	0/0:18,0:18:48.16:0,48,890	0/0:21,0:21:63.22:0,63,1172	0/0:26,0:25:78.27:0,78,1442	1/1:1,22:23:66.22:971,66,0	0/0:20,0:20:60.21:0,60,1123	0/0:25,0:25:69.24:0,69,1279	0/0:15,0:15:45.15:0,45,821	0/0:20,0:20:60.21:0,60,1094	0/0:19,0:19:57.20:0,57,1067	0/0:25,0:25:75.26:0,75,1390	0/0:29,0:29:87.28:0,87,1598	1/1:1,22:22:10.02:872,10,0	1/1:1,37:38:99:1580,108,0	0/0:30,0:30:87.30:0,87,1630	0/0:21,0:21:63.22:0,63,1150	0/0:14,0:14:42.14:0,42,787	0/0:41,0:41:99:0,117,2169	0/0:18,0:18:51.17:0,51,955	0/0:20,0:20:60.21:0,60,1112	0/0:35,0:35:99:0,105,1934	0/0:23,0:23:69.24:0,69,1284	0/0:26,0:26:75.25:0,75,1352	0/0:32,0:32:96.33:0,96,1779	0/0:15,0:15:45.15:0,45,842
chr10	58930550	.	T	TTGG	22165.45	PASS	AB=0.571;AC=45;AF=0.804;AN=56;BaseQRankSum=-12.635;DP=748;FS=2.348;HRun=0;HaplotypeScore=105.7587;InbreedingCoeff=0.8858;MQ=72.48;MQ0=1;MQRankSum=-5.477;QD=37.63;ReadPosRankSum=5.613;VQSLOD=5.7333;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:96.29:0,96,1370	1/1:2,13:15:39.13:801,39,0	0/0:36,0:33:57.03:0,57,751	0/0:31,0:31:43.93:0,44,729	0/0:33,0:33:66.22:0,66,947	1/1:10,18:27:66.22:1329,66,0	1/1:5,18:24:51.17:1000,51,0	1/1:16,13:29:45.61:876,46,0	0/0:19,0:19:54.15:0,54,742	1/1:14,17:31:54.19:1096,54,0	1/1:12,6:18:30.10:600,30,0	1/1:5,21:26:57.20:1164,57,0	1/1:7,19:28:51.12:1044,51,0	1/1:3,17:20:48.16:979,48,0	1/1:10,22:32:60.21:1224,60,0	1/1:19,23:42:69.24:1390,69,0	1/1:8,19:27:54.19:1110,54,0	0/1:6,17:24:36.14:873,0,36	1/1:12,7:19:21.07:431,21,0	1/1:12,13:25:33.11:671,33,0	1/1:10,15:25:45.15:924,45,0	1/1:14,11:25:36.12:724,36,0	1/1:9,12:22:33.58:655,34,0	1/1:5,25:30:72.23:1478,72,0	1/1:11,16:27:48.16:958,48,0	1/1:13,16:29:51.16:988,51,0	1/1:9,18:26:54.18:1109,54,0	1/1:3,12:15:36.12:740,36,0
chr10	58930605	.	T	TTG	4052.14	PASS	AC=42;AF=0.840;AN=50;BaseQRankSum=3.503;DP=672;FS=0.000;HRun=0;HaplotypeScore=175.5856;InbreedingCoeff=0.8386;MQ=60.42;MQ0=7;MQRankSum=0.485;QD=7.96;ReadPosRankSum=1.027;VQSLOD=3.2939;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:24,7:31:9.03:134,9,0	./.	./.	./.	0/0:23,0:23:15.03:0,15,156	1/1:22,0:22:11.21:109,11,0	1/1:27,0:28:17.34:138,17,0	0/0:33,0:32:3.69:0,4,36	0/0:22,0:23:26.69:0,27,235	1/1:27,0:28:26.69:277,27,0	1/1:15,0:17:13.84:142,14,0	1/1:25,0:26:17.92:159,18,0	1/1:20,0:20:14.96:133,15,0	1/1:19,0:21:12.01:118,12,0	1/1:17,1:25:39.02:402,39,0	1/1:30,0:32:14.48:110,14,0	0/0:21,0:21:18.05:0,18,195	1/1:21,9:32:48.13:662,48,0	1/1:16,0:16:7.80:53,8,0	1/1:15,1:16:14.49:127,14,0	1/1:24,0:26:15.01:160,15,0	1/1:19,0:19:11.98:110,12,0	1/1:21,0:21:14.55:112,15,0	1/1:29,0:30:11.45:78,11,0	1/1:25,1:27:26.99:262,27,0	1/1:30,0:30:30.82:320,31,0	1/1:21,1:24:30.02:308,30,0	1/1:12,0:12:14.98:138,15,0
chr10	58933415	.	GGC	G	364.64	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.075;DP=707;FS=0.000;HRun=0;HaplotypeScore=80.3045;InbreedingCoeff=0.9916;MQ=82.14;MQ0=0;MQRankSum=-1.465;QD=26.05;ReadPosRankSum=0.062;VQSLOD=4.2304;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,123,2324	0/0:6,0:6:18.06:0,18,339	0/0:19,0:19:54.12:0,54,980	0/0:24,0:24:72.25:0,72,1350	0/0:26,0:26:72.25:0,72,1386	0/0:22,0:22:66.21:0,66,1241	0/0:35,0:35:99:0,102,1966	0/0:21,0:21:60.19:0,60,1095	0/0:23,0:23:66.23:0,66,1266	0/0:39,0:39:99:0,114,2149	0/0:21,0:21:57.16:0,57,1032	0/0:38,0:38:99:0,111,2138	0/0:20,0:20:57.20:0,57,1085	0/0:33,0:33:99:0,99,1861	0/0:20,0:20:60.21:0,60,1154	1/1:2,12:14:30.10:459,30,0	0/0:33,0:33:99:0,99,1889	0/0:21,0:21:63.22:0,63,1214	0/0:26,0:26:78.26:0,78,1470	0/0:19,0:19:51.16:0,51,931	0/0:34,0:34:99:0,99,1832	0/0:35,0:35:99:0,99,1855	0/0:19,0:19:57.20:0,57,1099	0/0:22,0:22:66.23:0,66,1240	0/0:22,0:22:66.23:0,66,1272	0/0:31,0:31:87.26:0,87,1627	0/0:26,0:26:78.23:0,78,1436	0/0:16,0:16:48.11:0,48,884
chr10	58935699	.	TG	T	911.95	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.725;DP=857;FS=6.550;HRun=1;HaplotypeScore=76.6007;InbreedingCoeff=0.9999;MQ=87.96;MQ0=1;MQRankSum=-1.894;QD=32.57;ReadPosRankSum=0.976;VQSLOD=3.0023;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:58:99:0,172,2601	0/0:15,0:15:45.14:0,45,682	0/0:30,0:30:87.27:0,87,1326	0/0:29,0:29:72.99:0,73,1023	0/0:24,0:24:72.19:0,72,1057	0/0:27,0:27:81.25:0,81,1223	0/0:29,0:29:87.30:0,87,1359	0/0:24,0:24:72.22:0,72,1084	0/0:31,0:31:93.30:0,93,1428	0/0:36,0:36:99:0,108,1617	0/0:29,0:29:87.28:0,87,1338	0/0:42,0:42:99:0,120,1806	0/0:28,0:28:81.26:0,81,1239	0/0:35,0:35:96.26:0,96,1409	0/0:33,0:33:99:0,99,1525	1/1:0,28:28:72.24:1007,72,0	0/0:39,0:39:99:0,117,1754	0/0:26,0:26:75.24:0,75,1147	0/0:17,0:17:51.15:0,51,757	0/0:18,0:18:54.14:0,54,795	0/0:54,0:53:99:0,156,2367	0/0:25,0:25:75.24:0,75,1148	0/0:26,0:26:72.25:0,72,1123	0/0:42,0:42:99:0,123,1898	0/0:28,0:28:84.26:0,84,1266	0/0:40,0:40:99:0,120,1853	0/0:32,0:32:96.29:0,96,1444	0/0:12,0:12:36.12:0,36,563
chr10	58937258	.	GCTACAGCCCCACTCCACAGATCCACA	G	2657.61	PASS	AB=0.617;AC=7;AF=0.125;AN=56;BaseQRankSum=4.778;DP=798;FS=0.870;HRun=0;HaplotypeScore=500.0496;InbreedingCoeff=0.7501;MQ=90.81;MQ0=0;MQRankSum=-5.365;QD=39.67;ReadPosRankSum=0.252;VQSLOD=0.0291;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,144,14429	1/1:6,14:20:30.10:1833,30,0	0/0:37,0:37:99:0,99,5749	0/0:27,0:27:57.15:0,57,2885	0/0:12,0:12:33.11:0,33,3372	0/0:38,0:38:99:0,108,10724	0/0:41,0:41:99:0,114,10207	1/1:14,0:14:9.02:159,9,0	0/0:31,0:31:81.28:0,81,8684	0/0:28,0:28:72.24:0,72,6204	0/0:17,0:17:48.16:0,48,4954	0/0:31,0:31:90.30:0,90,8931	0/0:29,0:29:81.28:0,81,8037	0/0:26,0:26:72.25:0,72,7480	0/0:39,0:39:99:0,114,12220	0/0:45,0:45:99:0,126,12686	0/1:11,18:29:99:761,0,346	1/1:4,0:4:3.01:39,3,0	0/0:21,0:21:48.16:0,48,3299	0/0:22,0:22:63.22:0,63,6179	0/0:70,0:70:99:0,205,18734	0/0:20,0:20:57.18:0,57,6097	0/0:19,0:19:57.20:0,57,6051	0/0:33,0:33:93.32:0,93,10035	0/0:19,0:19:57.20:0,57,5290	0/0:30,0:30:87.30:0,87,9376	0/0:24,0:24:66.23:0,66,5761	0/0:19,0:19:57.20:0,57,5978
chr10	58939350	.	A	AT	7502.46	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-8.961;DP=623;FS=5.474;HRun=9;HaplotypeScore=65.9201;InbreedingCoeff=0.9836;MQ=72.47;MQ0=0;MQRankSum=-2.881;QD=24.93;ReadPosRankSum=0.770;VQSLOD=5.7149;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,111,963	1/1:1,9:10:21.06:232,21,0	0/0:17,1:18:14.56:0,15,264	0/0:16,0:16:26.05:0,26,237	0/0:15,0:15:29.99:0,30,260	0/0:27,0:27:71.95:0,72,621	0/0:31,0:31:77.96:0,78,673	1/1:5,22:27:66.18:729,66,0	0/0:15,0:15:38.98:0,39,338	1/1:3,31:34:96.23:1043,96,0	1/1:3,14:17:33.09:360,33,0	0/0:25,0:25:62.97:0,63,547	0/0:20,0:20:50.98:0,51,443	1/1:2,17:19:51.14:564,51,0	1/1:7,23:30:66.12:706,66,0	0/0:26,0:26:59.94:0,60,513	1/1:5,30:35:20.17:890,20,0	0/0:22,0:23:65.02:0,65,553	1/1:5,13:18:39.11:431,39,0	1/1:2,8:10:21.02:219,21,0	1/1:5,14:20:42.11:463,42,0	0/0:21,0:21:50.95:0,51,435	0/0:20,0:20:50.98:0,51,442	0/0:24,0:24:56.95:0,57,490	1/1:2,23:25:63.17:697,63,0	1/1:4,11:15:7.03:306,7,0	1/1:7,15:23:39.11:431,39,0	1/1:2,16:18:39.11:431,39,0
chr10	58939674	.	T	TCCAGTGTGGGCACA	17981.71	PASS	AB=0.948;AC=50;AF=0.893;AN=56;BaseQRankSum=-5.319;DP=289;FS=5.625;HRun=0;HaplotypeScore=331.4280;InbreedingCoeff=-0.1257;MQ=60.80;MQ0=1;MQRankSum=-0.549;QD=62.22;ReadPosRankSum=0.090;VQSLOD=3.3919;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:11:18.06:644,18,0	0/1:3,0:3:2.10:354,0,2	0/1:7,1:8:69.68:216,0,70	0/1:3,0:4:23.11:578,0,23	0/1:14,0:14:1.32:73,0,1	1/1:13,0:14:28.32:834,28,0	1/1:20,0:20:44.69:1414,45,0	1/1:10,0:10:30.09:1146,30,0	0/1:10,0:10:7.67:543,0,8	1/1:11,0:11:24.47:673,24,0	1/1:7,0:7:11.22:382,11,0	1/1:10,0:10:6.52:650,7,0	1/1:17,0:17:23.10:1336,23,0	1/1:5,0:5:6.96:305,7,0	1/1:10,0:11:9.16:558,9,0	1/1:19,0:20:27.78:1256,28,0	1/1:6,0:6:0.98:456,1,0	1/1:9,0:9:20.96:791,21,0	1/1:13,0:13:34.42:1102,34,0	1/1:10,0:10:5.18:237,5,0	1/1:11,0:13:20.99:413,21,0	1/1:11,0:11:17.32:541,17,0	0/1:5,0:5:4.30:116,0,4	1/1:6,0:6:12:397,12,0	1/1:14,0:14:22.27:775,22,0	1/1:8,0:8:13.15:731,13,0	1/1:11,0:12:14.49:807,14,0	1/1:6,0:6:11.28:655,11,0
chr10	58940021	.	C	CT	257.03	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-0.977;DP=577;FS=3.491;HRun=10;HaplotypeScore=72.0164;InbreedingCoeff=0.9146;MQ=78.28;MQ0=1;MQRankSum=-0.201;QD=16.06;ReadPosRankSum=-0.498;VQSLOD=3.9849;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,117,960	0/0:8,0:9:17.01:0,17,129	0/0:16,0:17:26.79:0,27,239	0/0:16,0:17:19.50:0,19,125	0/0:17,0:18:31.99:0,32,252	0/0:17,0:18:49.98:0,50,400	0/0:21,0:21:47.86:0,48,388	0/0:21,0:21:47.92:0,48,394	0/0:20,0:20:47.91:0,48,394	0/0:19,0:19:44.91:0,45,367	0/0:15,0:15:26.93:0,27,221	0/0:20,0:20:50.94:0,51,419	0/0:19,0:18:41.93:0,42,345	0/0:22,0:22:56.90:0,57,466	0/0:27,1:28:39.92:0,40,534	1/1:2,14:16:33.08:352,33,0	0/0:26,1:27:42.88:0,43,553	0/0:23,0:23:50.92:0,51,419	0/0:20,0:20:47.93:0,48,394	0/0:16,0:16:35.93:0,36,295	0/0:19,1:20:21.93:0,22,387	0/0:17,0:17:35.95:0,36,296	0/0:14,1:15:16.22:0,16,251	0/0:19,0:19:41.93:0,42,345	0/0:27,0:27:62.90:0,63,517	0/0:29,0:31:66.98:0,67,529	0/0:31,0:31:68.60:0,69,566	0/0:4,0:4:8.98:0,9,74
chr10	58940414	.	G	GGTGT	7417.37	PASS	AB=0.694;AC=34;AF=0.680;AN=50;BaseQRankSum=-4.031;DP=676;FS=1.342;HRun=0;HaplotypeScore=128.4012;InbreedingCoeff=0.3949;MQ=66.81;MQ0=16;MQRankSum=-0.904;QD=15.01;ReadPosRankSum=-1.076;VQSLOD=4.2818;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:41:36.77:0,37,512	0/0:2,0:6:6.43:0,6,57	./.	./.	0/0:13,0:16:9.73:0,10,387	0/1:12,7:21:28.12:139,0,28	1/1:34,4:40:41.32:551,41,0	./.	0/0:14,0:19:21.05:0,21,271	0/1:15,7:23:66.85:395,0,67	1/1:12,0:13:11.78:167,12,0	0/1:19,6:33:23.89:266,0,24	1/1:12,9:21:22.32:485,22,0	0/1:11,8:21:6.95:484,0,7	1/1:14,7:22:26.50:518,26,0	0/1:15,0:31:77.54:112,0,78	0/0:14,0:25:18.02:0,18,167	0/1:22,11:39:6.48:535,0,6	1/1:21,0:22:9:144,9,0	1/1:10,7:21:14.77:297,15,0	1/1:23,11:43:28.83:471,29,0	1/1:4,4:8:9.03:213,9,0	1/1:6,7:14:12.03:240,12,0	1/1:15,20:40:25.87:1077,26,0	1/1:13,8:22:18.06:415,18,0	1/1:15,4:22:23.76:379,24,0	1/1:4,9:22:26.56:504,27,0	1/1:6,0:8:5.49:25,5,0
chr10	58940429	.	GT	G	285.35	PASS	AB=0.765;AC=4;AF=0.071;AN=56;BaseQRankSum=4.593;DP=682;FS=4.134;HRun=1;HaplotypeScore=106.2640;InbreedingCoeff=0.3151;MQ=54.89;MQ0=24;MQRankSum=-2.899;QD=5.82;ReadPosRankSum=-1.656;VQSLOD=-0.0818;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:41:91.15:0,91,1233	1/1:7,1:7:3.24:11,3,0	0/0:30,0:15:42.10:0,42,522	0/0:44,0:13:33.11:0,33,424	0/0:17,0:17:45.01:0,45,601	0/0:21,0:21:36.10:0,36,454	0/0:35,0:33:84.68:0,85,1003	0/1:6,11:17:99:351,0,180	0/0:18,0:18:45.24:0,45,552	0/0:23,0:22:63.63:0,64,757	0/0:13,0:13:28.63:0,29,315	0/0:35,0:35:78.17:0,78,973	0/0:23,0:23:54.04:0,54,630	0/0:23,0:21:41.98:0,42,462	0/0:32,0:31:84.06:0,84,1003	0/0:24,0:24:47.82:0,48,566	0/1:22,2:22:20.12:20,0,73	0/0:36,0:36:86.95:0,87,1018	0/0:18,0:17:51.17:0,51,682	0/0:17,0:17:28.54:0,29,348	0/0:44,0:44:75.20:0,75,912	0/0:10,0:10:24.05:0,24,272	0/0:17,0:16:32.67:0,33,353	0/0:38,0:38:77.20:0,77,812	0/0:20,0:19:38.84:0,39,448	0/0:18,0:18:53.75:0,54,662	0/0:25,0:24:48.10:0,48,526	0/0:10,0:10:27.05:0,27,304
chr10	58940786	.	TCCCA	T	14869.79	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=17.335;DP=750;FS=0.587;HRun=0;HaplotypeScore=128.5788;InbreedingCoeff=0.9995;MQ=80.76;MQ0=2;MQRankSum=-6.130;QD=49.73;ReadPosRankSum=3.677;VQSLOD=5.8411;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,123,3414	1/1:0,9:9:24.08:475,24,0	0/0:21,0:21:60.06:0,60,1447	0/0:20,0:20:47.47:0,47,1423	0/0:21,0:21:57.20:0,57,1566	1/1:0,24:23:63.22:1257,63,0	1/1:0,22:22:63.22:1256,63,0	1/1:4,28:32:81.24:1505,81,0	0/0:17,0:17:45.15:0,45,1259	0/0:31,0:31:93.32:0,93,2587	0/0:15,0:15:45.15:0,45,1253	1/1:1,37:37:93.32:1849,93,0	1/1:1,23:25:60.21:1197,60,0	0/0:36,1:37:51.62:0,52,2818	0/0:38,0:38:99:0,114,3060	0/0:26,0:26:78.25:0,78,2045	1/1:1,36:37:93.32:1852,93,0	1/1:1,33:34:87.30:1730,87,0	0/0:22,0:22:66.22:0,66,1783	0/0:18,0:18:54.19:0,54,1492	0/0:48,0:48:99:0,135,3644	1/1:0,24:24:60.21:1197,60,0	1/1:0,16:16:36.12:710,36,0	1/1:0,38:38:93.32:1843,93,0	0/0:24,0:24:72.24:0,72,1951	0/0:35,0:35:99:0,105,2914	0/0:25,0:25:75.26:0,75,2039	0/0:10,0:10:27.09:0,27,755
chr10	59001345	.	GT	G	1291.51	PASS	AB=1.000;AC=20;AF=0.357;AN=56;BaseQRankSum=9.937;DP=448;FS=10.847;HRun=1;HaplotypeScore=76.8526;InbreedingCoeff=0.6234;MQ=61.34;MQ0=0;MQRankSum=-2.608;QD=8.39;ReadPosRankSum=4.594;VQSLOD=0.0702;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,99,1529	0/0:7,0:7:21.07:0,21,333	0/0:19,1:17:28.27:0,28,740	0/0:23,0:23:63.21:0,63,988	0/0:5,0:5:15.05:0,15,239	0/0:18,0:18:48.16:0,48,766	0/0:32,0:32:96.31:0,96,1485	0/0:15,0:15:42.12:0,42,608	0/0:9,0:9:27.09:0,27,420	0/1:15,0:15:51.66:87,0,52	1/1:5,0:5:8.45:44,8,0	0/0:19,0:19:52.73:0,53,814	0/0:15,0:15:42.13:0,42,645	1/1:10,1:11:3.65:135,4,0	1/1:11,2:13:34.16:228,34,0	1/1:15,0:15:16.68:166,17,0	0/0:20,0:20:52.40:0,52,784	0/0:28,0:28:79.07:0,79,1162	0/1:18,0:17:28.97:109,0,29	0/1:15,0:15:10.08:142,0,10	1/1:30,1:31:3.71:242,4,0	0/0:14,0:14:30.08:0,30,454	0/0:12,0:12:33.11:0,33,527	0/0:23,0:23:66.22:0,66,1044	1/1:6,0:6:11.28:59,11,0	0/1:15,0:15:7.66:142,0,8	1/1:7,0:7:16.77:90,17,0	1/1:3,0:3:8.52:44,9,0
chr10	59001346	.	TG	T	4624.05	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=4.992;DP=446;FS=10.723;HRun=3;HaplotypeScore=66.3182;InbreedingCoeff=0.9748;MQ=61.46;MQ0=0;MQRankSum=-1.542;QD=31.24;ReadPosRankSum=2.986;VQSLOD=4.3522;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:96.32:0,96,1381	0/0:7,0:7:21.07:0,21,302	0/0:20,0:17:48.12:0,48,651	0/0:24,0:24:66.21:0,66,907	0/0:6,0:6:15.05:0,15,215	0/0:18,0:18:48.16:0,48,691	0/0:32,0:32:93.30:0,93,1320	0/0:15,0:15:23.85:0,24,542	0/0:9,0:9:27.09:0,27,388	1/1:2,13:15:33.10:409,33,0	1/1:0,5:5:9.03:112,9,0	0/0:20,0:20:54.15:0,54,756	0/0:15,0:15:42.13:0,42,587	1/1:3,7:10:27.08:330,27,0	1/1:5,9:14:42.11:489,42,0	1/1:0,15:15:39.12:483,39,0	0/0:20,0:20:54.15:0,54,754	0/0:28,0:28:68.09:0,68,986	1/1:3,14:16:42.12:501,42,0	1/1:1,13:14:36.11:446,36,0	1/1:2,27:29:72.22:893,72,0	0/0:15,0:15:33.10:0,33,456	0/0:12,0:12:33.11:0,33,475	0/0:23,0:23:66.21:0,66,932	1/1:2,4:6:12.04:144,12,0	1/1:0,13:13:39.12:483,39,0	1/1:0,7:7:18.06:223,18,0	1/1:0,3:3:9.03:112,9,0
chr10	59001393	.	T	TTG	1009.61	PASS	AB=0.728;AC=15;AF=0.268;AN=56;BaseQRankSum=9.240;DP=408;FS=0.000;HRun=0;HaplotypeScore=102.6001;InbreedingCoeff=0.1585;MQ=70.19;MQ0=0;MQRankSum=-4.818;QD=7.26;ReadPosRankSum=-4.012;VQSLOD=2.4934;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:49:0,49,163	0/0:5,0:5:6.11:0,6,17	0/0:15,0:16:27.50:0,27,443	0/0:17,0:15:21.64:0,22,182	0/0:11,0:11:19.90:0,20,73	0/0:16,0:16:25.65:0,26,85	0/0:23,0:23:40.30:0,40,147	0/0:11,0:11:21.04:0,21,152	0/0:15,0:15:42.14:0,42,616	0/1:8,0:12:40.78:140,0,41	1/1:1,0:7:10.47:107,10,0	0/0:23,0:23:38.70:0,39,107	0/0:14,0:14:25.18:0,25,84	0/1:7,0:9:6.13:78,0,6	0/1:4,0:16:38.12:94,0,38	0/1:10,0:15:34.19:139,0,34	0/0:13,0:13:20.37:0,20,56	0/0:13,0:13:21.09:0,21,71	0/1:4,0:7:29.13:51,0,29	0/1:6,0:8:4.11:4,0,14	0/1:7,0:17:29.25:88,0,29	0/0:17,0:17:28.37:0,28,107	0/0:20,0:20:28:0,28,83	0/0:20,0:20:33.11:0,33,108	1/1:3,1:13:24.01:222,24,0	0/1:9,0:17:53.33:193,0,53	0/1:10,0:12:36.31:36,0,38	1/1:2,0:5:2.99:23,3,0
chr10	59001394	.	T	TG	7280.52	PASS	AB=1.000;AC=51;AF=0.911;AN=56;BaseQRankSum=-1.608;DP=430;FS=1.711;HRun=7;HaplotypeScore=87.4305;InbreedingCoeff=0.6491;MQ=68.50;MQ0=0;MQRankSum=-4.084;QD=18.34;ReadPosRankSum=0.048;VQSLOD=4.5341;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,28:36:66.20:797,66,0	1/1:1,4:5:9.03:109,9,0	0/0:16,0:17:32.56:0,33,282	0/1:17,0:15:22.08:23,0,22	1/1:1,10:11:27.07:313,27,0	1/1:1,15:16:36.11:433,36,0	1/1:5,17:22:51.16:613,51,0	1/1:8,6:14:20.94:194,21,0	0/0:16,0:16:42.07:0,42,405	1/1:14,0:14:25.41:137,25,0	1/1:7,1:8:17.38:111,17,0	1/1:0,23:23:57.17:689,57,0	1/1:2,12:14:33.10:399,33,0	1/1:12,0:12:23.97:150,24,0	1/1:24,0:24:29.05:180,29,0	1/1:17,0:17:37.77:219,38,0	1/1:1,13:14:30.09:362,30,0	1/1:2,10:12:27.08:326,27,0	1/1:8,0:7:8.58:44,9,0	1/1:9,0:9:5.79:50,6,0	1/1:17,0:17:19.92:140,20,0	1/1:2,15:17:36.03:415,36,0	1/1:1,19:20:45.50:539,46,0	1/1:2,17:19:45.14:544,45,0	1/1:14,0:14:32:206,32,0	1/1:17,0:17:31.66:181,32,0	1/1:13,0:13:13.89:92,14,0	1/1:3,0:3:2.84:14,3,0
chr10	59001932	.	GAT	G	14251.02	PASS	AB=0.515;AC=23;AF=0.411;AN=56;BaseQRankSum=19.844;DP=758;FS=7.023;HRun=0;HaplotypeScore=108.0345;InbreedingCoeff=0.9267;MQ=89.93;MQ0=0;MQRankSum=-3.815;QD=42.67;ReadPosRankSum=3.748;VQSLOD=6.6460;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:66,0:66:99:0,196,3869	0/0:6,0:6:18.05:0,18,330	0/0:30,0:30:90.30:0,90,1744	0/0:30,0:30:90.29:0,90,1764	0/0:26,0:26:78.25:0,78,1528	0/0:21,0:21:63.15:0,63,1107	0/0:25,0:25:72.22:0,72,1388	0/0:24,0:24:68.96:0,69,1368	0/0:28,0:28:84.29:0,84,1691	1/1:0,31:31:90.26:1390,90,0	1/1:0,18:18:48.16:777,48,0	0/0:23,0:23:69.18:0,69,1280	0/0:24,0:24:72.25:0,72,1459	1/1:0,25:25:63.22:1027,63,0	1/1:0,38:38:99:1681,105,0	0/1:2,33:35:16.47:1506,0,16	0/0:25,0:25:75.23:0,75,1484	0/0:15,0:15:45.12:0,45,836	1/1:0,23:23:69.16:1040,69,0	1/1:0,24:24:63.22:1025,63,0	1/1:0,39:39:96.33:1562,96,0	0/0:23,0:23:66.23:0,66,1311	0/0:19,0:19:57.16:0,57,1073	0/0:39,0:39:99:0,117,2282	1/1:0,22:22:57.19:929,57,0	1/1:0,42:42:99:1995,126,0	1/1:0,21:21:47.73:782,48,0	1/1:0,16:16:33.11:538,33,0
chr10	59004430	.	T	TTTTGG	15257.51	PASS	AB=1.000;AC=25;AF=0.446;AN=56;BaseQRankSum=-13.799;DP=744;FS=6.864;HRun=0;HaplotypeScore=128.7086;InbreedingCoeff=0.9350;MQ=69.09;MQ0=2;MQRankSum=-0.636;QD=39.63;ReadPosRankSum=0.874;VQSLOD=4.7096;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:63.21:0,63,1138	0/0:10,0:10:24.07:0,24,412	0/0:40,0:34:34.10:0,34,567	0/1:46,0:31:9.18:9,0,444	0/0:27,0:27:48.16:0,48,874	0/0:24,0:24:57.19:0,57,997	0/0:25,0:25:45.15:0,45,832	0/0:30,0:30:36.08:0,36,621	0/0:32,0:32:75.26:0,75,1365	1/1:14,18:33:60.20:1610,60,0	1/1:7,12:21:32.59:830,33,0	0/0:22,0:22:51.15:0,51,883	0/0:21,0:21:45.15:0,45,827	1/1:6,16:24:45.15:1282,45,0	1/1:13,19:34:51.18:1453,51,0	1/1:7,17:25:45.15:1282,45,0	0/0:18,0:18:36.12:0,36,639	0/0:18,0:18:33.10:0,33,558	1/1:13,12:24:39.02:920,39,0	1/1:9,19:29:54.18:1452,54,0	1/1:18,16:35:42.14:1197,42,0	0/0:22,0:22:48.11:0,48,812	0/0:17,0:17:33.11:0,33,603	0/0:23,0:23:57.18:0,57,972	1/1:7,16:23:45.15:1249,45,0	1/1:14,15:30:48.15:1264,48,0	1/1:11,21:34:57.20:1599,57,0	1/1:12,14:26:39.61:1112,40,0
chr10	59004572	.	AC	A	2625.93	PASS	AB=0.969;AC=40;AF=0.714;AN=56;BaseQRankSum=-3.885;DP=471;FS=1.513;HRun=4;HaplotypeScore=99.3089;InbreedingCoeff=0.2321;MQ=76.80;MQ0=0;MQRankSum=-0.777;QD=6.36;ReadPosRankSum=-1.697;VQSLOD=-0.4064;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:11:4.46:28,4,0	1/1:7,0:7:11.39:65,11,0	0/0:13,0:11:23.59:0,24,197	0/0:20,0:17:25.81:0,26,244	1/1:7,0:7:4.54:32,5,0	1/1:25,0:25:52.92:276,53,0	1/1:18,0:18:17.74:82,18,0	1/1:24,0:24:49.66:283,50,0	0/0:15,0:15:38.47:0,38,466	1/1:16,0:16:7.28:75,7,0	0/1:13,0:13:1.10:1,0,64	1/1:21,0:21:22.87:136,23,0	1/1:22,0:22:41.22:241,41,0	1/1:16,3:19:8.99:193,9,0	0/1:33,1:34:9.66:210,0,10	0/1:20,0:20:22:71,0,22	1/1:14,0:14:15.34:60,15,0	0/0:10,0:10:0.89:0,1,2	0/1:13,0:12:10.81:33,0,11	0/1:20,1:21:20.10:101,0,20	0/1:8,1:9:11.24:39,0,11	1/1:17,0:17:34.10:201,34,0	1/1:14,0:14:15.69:96,16,0	1/1:18,0:18:20.06:108,20,0	0/1:10,0:10:8.36:8,0,15	1/1:18,2:20:1.51:153,2,0	0/1:24,2:26:45.07:146,0,45	1/1:12,2:14:4.87:155,5,0
chr10	59004575	.	C	CAA	3130.29	PASS	AB=0.920;AC=30;AF=0.536;AN=56;BaseQRankSum=-5.684;DP=512;FS=0.876;HRun=0;HaplotypeScore=121.5991;InbreedingCoeff=0.5983;MQ=74.41;MQ0=0;MQRankSum=0.182;QD=9.29;ReadPosRankSum=-0.557;VQSLOD=3.3448;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,0:12:3.10:38,3,0	1/1:2,5:10:8.53:95,9,0	0/0:13,0:10:26.96:0,27,330	0/0:19,0:16:26.22:0,26,347	1/1:1,1:9:10.18:89,10,0	1/1:6,15:25:26.54:527,27,0	0/1:6,13:20:3.83:356,0,4	1/1:5,15:25:49.93:553,50,0	0/0:14,0:14:42.08:0,42,625	0/0:16,0:17:16.24:0,16,151	0/0:14,0:14:23.76:0,24,247	1/1:3,17:24:7.78:208,8,0	1/1:7,12:22:6.27:325,6,0	0/1:23,1:24:18.47:18,0,184	0/1:37,0:38:1.48:1,0,354	0/0:20,0:20:21.65:0,22,264	1/1:1,10:15:18.34:200,18,0	1/1:1,2:11:1.89:17,2,0	0/0:14,0:13:8.59:0,9,164	0/1:23,0:23:1.39:1,0,227	0/1:9,0:9:0.44:0,0,130	1/1:4,14:22:34.15:391,34,0	1/1:6,7:16:16.30:183,16,0	1/1:4,17:23:8.18:319,8,0	0/1:9,0:9:2.39:2,0,79	0/0:21,0:21:40.05:0,40,261	0/0:27,0:29:56.60:0,57,361	0/0:12,0:14:19.17:0,19,153
chr10	59004743	.	GAA	G	6799.74	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=10.215;DP=565;FS=0.341;HRun=9;HaplotypeScore=83.4316;InbreedingCoeff=0.9843;MQ=78.77;MQ0=1;MQRankSum=-1.599;QD=28.10;ReadPosRankSum=3.100;VQSLOD=5.0026;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:89.79:0,90,1271	0/0:5,0:5:12.04:0,12,195	0/0:25,0:24:7.87:0,8,621	0/0:17,0:15:21.07:0,21,327	0/0:19,0:19:48.16:0,48,788	0/0:24,0:24:60.20:0,60,971	0/0:21,0:21:54.13:0,54,813	0/0:32,0:32:81.28:0,81,1324	0/0:9,0:9:24.07:0,24,368	1/1:4,23:27:69.20:803,69,0	1/1:3,21:24:63.18:734,63,0	0/0:24,0:24:42.10:0,42,650	0/0:15,0:15:42.08:0,42,656	1/1:2,16:18:42.12:489,42,0	1/1:4,18:22:45.12:524,45,0	1/1:2,8:10:24.07:279,24,0	0/0:26,0:26:60.20:0,60,972	0/0:17,0:17:48.12:0,48,751	1/1:1,16:17:45.12:514,45,0	1/1:2,19:21:45.11:524,45,0	1/1:1,17:18:39.11:454,39,0	0/0:19,0:19:42.13:0,42,665	0/0:16,0:17:38.61:0,39,577	0/0:19,0:19:54.10:0,54,825	1/1:2,27:29:72.21:838,72,0	1/1:2,18:20:54.16:629,54,0	1/1:5,18:23:51.14:592,51,0	1/1:1,12:13:36.11:419,36,0
chr10	59004768	.	CAGGCAGAGGCAGAGGCAGAGGCAGAGGCAG	C	704.45	PASS	AB=0.852;AC=16;AF=0.667;AN=24;BaseQRankSum=3.073;DP=464;FS=0.000;HRun=0;HaplotypeScore=313.7273;InbreedingCoeff=0.3553;MQ=60.83;MQ0=11;MQRankSum=-1.115;QD=3.98;ReadPosRankSum=1.822;VQSLOD=1.8846;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/1:35,0:14:0:0,0,0	./.	./.	./.	./.	1/1:19,0:18:3.01:44,3,0	0/0:10,0:10:21.07:0,21,2612	./.	./.	0/1:11,8:19:99:222,0,293	1/1:10,2:12:3.01:228,3,0	./.	./.	./.	1/1:20,0:20:9:109,9,0	0/0:14,0:14:7.20:0,7,89	./.	./.	0/0:13,0:13:0.89:0,1,2	1/1:14,0:14:5.70:87,6,0	1/1:14,0:14:6:68,6,0	1/1:18,0:18:5.16:34,5,0	1/1:26,0:26:2.74:12,3,0	./.	./.	./.
chr10	59004796	.	CAG	C	1005.19	PASS	AB=1.000;AC=23;AF=0.426;AN=54;BaseQRankSum=4.587;DP=245;FS=0.000;HRun=0;HaplotypeScore=42.4520;InbreedingCoeff=0.5644;MQ=41.61;MQ0=16;MQRankSum=-3.090;QD=10.05;ReadPosRankSum=-1.344;VQSLOD=2.8218;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:15.05:0,15,262	0/0:3,0:3:3.01:0,3,52	0/0:19,0:3:9.02:0,9,120	0/0:23,0:5:12.03:0,12,164	0/0:4,0:4:3.01:0,3,52	0/0:10,0:9:18.06:0,18,314	0/0:8,0:8:6.02:0,6,105	0/1:6,0:5:10.85:11,0,186	0/0:14,0:13:39.13:0,39,683	1/1:5,4:8:15.04:204,15,0	1/1:3,1:4:3:25,3,0	0/1:12,0:12:0.83:1,0,149	0/0:8,0:8:8.18:0,8,301	1/1:5,2:6:3:25,3,0	1/1:2,3:5:2.97:20,3,0	./.	0/0:13,0:13:18.06:0,18,303	0/0:9,0:9:23.78:0,24,341	1/1:4,3:7:15:178,15,0	1/1:3,3:6:6.01:69,6,0	0/0:3,4:6:0.89:0,1,2	0/0:10,0:8:6.02:0,6,104	0/0:5,0:5:12.04:0,12,209	0/1:11,0:12:29.24:29,0,192	1/1:10,3:13:20.62:157,21,0	1/1:6,3:9:15.03:185,15,0	1/1:1,3:4:8.99:108,9,0	1/1:1,5:6:12.04:174,12,0
chr10	59004808	.	CAG	C	248.60	PASS	AB=0.820;AC=16;AF=0.381;AN=42;BaseQRankSum=3.280;DP=187;FS=1.050;HRun=0;HaplotypeScore=36.4130;InbreedingCoeff=0.1411;MQ=39.07;MQ0=17;MQRankSum=2.463;QD=3.95;ReadPosRankSum=-2.136;VQSLOD=1.4402;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:10,2:12:18.06:0,18,330	0/0:3,2:5:6.02:0,6,110	0/0:16,0:3:2.22:0,2,7	0/0:17,0:4:12:0,12,156	0/0:5,1:5:6.02:0,6,100	0/0:5,5:9:15.05:0,15,274	0/0:9,5:14:21.07:0,21,384	0/1:3,1:4:33.31:33,0,83	0/0:14,0:13:39.13:0,39,717	1/1:2,0:1:3:25,3,0	1/1:1,0:1:2.94:18,3,0	0/0:14,0:14:7.64:0,8,317	0/0:12,0:12:13.66:0,14,426	./.	1/1:1,0:1:2.80:13,3,0	1/1:2,0:2:5.95:49,6,0	0/1:12,7:19:69.80:70,0,502	0/1:7,1:8:13.26:13,0,204	./.	./.	./.	0/1:5,3:6:73.15:73,0,150	0/1:5,1:4:46.19:59,0,46	0/1:10,1:11:7.74:8,0,232	./.	./.	1/1:1,0:1:2.99:24,3,0	./.
chr10	59004923	.	AAC	A	938.14	PASS	AB=0.975;AC=31;AF=0.596;AN=52;BaseQRankSum=7.176;DP=519;FS=1.589;HRun=0;HaplotypeScore=120.2103;InbreedingCoeff=0.2222;MQ=58.37;MQ0=9;MQRankSum=-3.045;QD=2.58;ReadPosRankSum=0.045;VQSLOD=2.4573;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:27:11.47:0,11,85	0/1:5,0:5:1.88:2,0,46	./.	./.	0/0:10,0:12:0.79:0,1,61	0/1:18,0:18:15.33:18,0,15	0/1:28,0:27:8.41:8,0,11	0/0:17,0:15:10.85:0,11,57	0/0:15,0:15:27.08:0,27,370	1/1:5,5:10:15.04:160,15,0	1/1:16,0:16:8.75:52,9,0	1/1:17,0:17:8.39:40,8,0	1/1:13,0:13:1.32:32,1,0	1/1:18,0:18:14.47:90,14,0	0/1:24,0:23:14.30:57,0,14	1/1:16,0:16:17:82,17,0	0/0:26,0:26:24.13:0,24,157	0/0:8,0:8:6.84:0,7,46	0/1:15,3:18:19:41,0,19	1/1:29,0:28:17.09:123,17,0	0/1:20,2:19:16.79:83,0,17	0/1:21,0:21:11.75:39,0,12	0/1:13,0:13:5.54:29,0,6	0/1:18,0:18:1.72:2,0,60	1/1:26,0:26:4.29:17,4,0	1/1:29,0:29:18.78:114,19,0	1/1:15,0:15:2.84:14,3,0	1/1:4,3:6:9.02:100,9,0
chr10	59004943	.	CACACACACACACACACAA	C	6493.66	PASS	AB=0.928;AC=36;AF=0.643;AN=56;BaseQRankSum=4.416;DP=572;FS=8.061;HRun=0;HaplotypeScore=199.4656;InbreedingCoeff=0.3330;MQ=49.71;MQ0=23;MQRankSum=-2.710;QD=15.21;ReadPosRankSum=0.925;VQSLOD=3.0961;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:2.70:0,3,552	1/1:5,0:5:5.38:137,5,0	0/0:21,0:7:3:0,3,26	0/0:36,0:9:6.23:0,6,53	0/1:17,0:16:46.19:46,0,382	1/1:7,13:20:6.02:296,6,0	1/1:8,21:29:9:300,9,0	0/1:14,0:11:10.45:48,0,10	0/0:18,0:18:45.15:0,45,2804	0/0:11,0:10:15.96:0,16,81	1/1:14,0:13:2.63:127,3,0	1/1:2,19:20:11.71:550,12,0	0/1:5,16:21:33.40:370,0,33	1/1:26,0:26:15.52:612,16,0	0/1:28,0:27:2.09:613,0,2	1/1:13,0:13:18.06:758,18,0	1/1:31,0:31:32.46:270,32,0	0/0:9,0:9:18.04:0,18,612	0/1:15,0:11:27.94:28,0,57	1/1:30,0:29:8.28:256,8,0	0/0:19,0:15:4.41:0,4,40	1/1:21,0:21:15.05:428,15,0	1/1:5,9:14:8.79:424,9,0	1/1:10,14:24:6.01:176,6,0	1/1:30,0:30:0.09:316,0,0	1/1:29,0:29:26.88:603,27,0	1/1:18,0:18:3:127,3,0	0/1:7,0:6:3.30:10,0,3
chr10	59004945	.	CACACACACACACACAA	C	5981.03	PASS	AB=1.000;AC=40;AF=0.714;AN=56;BaseQRankSum=3.574;DP=577;FS=2.348;HRun=0;HaplotypeScore=192.8276;InbreedingCoeff=0.3687;MQ=49.68;MQ0=20;MQRankSum=-4.276;QD=13.17;ReadPosRankSum=0.677;VQSLOD=3.8927;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:31:6.69:0,7,571	1/1:5,0:5:5.38:123,5,0	0/0:21,0:7:3:0,3,26	0/0:36,0:9:1.47:0,1,19	0/1:17,0:16:43.87:44,0,362	1/1:20,0:20:6.02:230,6,0	1/1:28,0:28:8.39:220,8,0	0/1:15,0:12:14.23:91,0,14	0/0:18,0:18:45.15:0,45,2471	1/1:11,0:10:6.15:42,6,0	1/1:14,0:13:2.63:113,3,0	1/1:21,0:20:11.71:418,12,0	1/1:20,1:21:11.96:388,12,0	1/1:27,0:27:15.52:543,16,0	0/1:29,0:28:2.48:544,0,2	1/1:13,0:13:18.06:674,18,0	1/1:32,0:32:18.73:239,19,0	0/0:10,0:10:18.52:0,19,521	0/1:18,0:14:32.56:76,0,33	1/1:29,0:28:7.32:211,7,0	1/1:18,0:14:4.03:20,4,0	1/1:9,12:21:15.05:572,15,0	1/1:14,0:14:8.54:344,9,0	1/1:24,0:24:5.85:129,6,0	1/1:30,0:30:4.17:299,4,0	1/1:29,0:29:26.88:548,27,0	1/1:18,0:18:3:113,3,0	0/0:6,0:6:4.46:0,4,13
chr10	59004955	.	CACACAAACACACACACACACACACAG	C	5729.34	PASS	AB=0.996;AC=21;AF=0.375;AN=56;BaseQRankSum=4.730;DP=592;FS=12.824;HRun=0;HaplotypeScore=261.6756;InbreedingCoeff=-0.1142;MQ=50.16;MQ0=26;MQRankSum=-2.243;QD=15.87;ReadPosRankSum=3.717;VQSLOD=2.2054;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:34:24.81:0,25,1153	0/1:7,0:7:36.07:36,0,151	0/0:28,0:8:23.11:0,23,477	0/0:33,0:9:20.92:0,21,514	0/0:20,0:19:6.85:0,7,735	0/1:16,0:16:13.67:14,0,33	0/1:26,0:26:0.37:0,0,67	0/0:16,0:13:33.01:0,33,497	0/0:17,0:17:51.17:0,51,4324	0/1:13,0:12:9.68:205,0,10	0/1:15,0:14:17.40:146,0,17	0/1:20,0:19:18.18:22,0,18	0/1:21,0:21:14.16:14,0,114	1/1:28,0:28:15.03:751,15,0	0/1:28,1:28:54.01:815,0,54	1/1:0,13:13:18.06:1281,18,0	0/0:32,0:32:64.79:0,65,1304	0/0:10,0:10:18.06:0,18,936	0/1:17,0:14:99:168,0,128	0/1:32,0:31:18.20:324,0,18	0/1:26,0:22:9.82:304,0,10	0/0:19,0:19:27.02:0,27,291	0/1:12,0:12:57.88:58,0,67	0/0:21,0:21:5.37:0,5,177	0/1:29,0:29:17.89:428,0,18	0/1:28,1:29:98.14:834,0,98	0/1:20,0:21:10.92:182,0,11	1/1:4,0:5:11.58:147,12,0
chr10	59004957	.	CACAAACACACACACACACACACAG	C	7682.43	PASS	AB=0.910;AC=28;AF=0.500;AN=56;BaseQRankSum=4.295;DP=585;FS=7.868;HRun=0;HaplotypeScore=239.1617;InbreedingCoeff=0.2275;MQ=51.42;MQ0=26;MQRankSum=-2.034;QD=20.76;ReadPosRankSum=3.529;VQSLOD=2.5857;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:34:24.67:0,25,1098	0/1:6,0:6:64.89:65,0,111	0/0:27,0:8:23.11:0,23,428	0/0:34,0:9:18.76:0,19,390	0/0:20,0:19:4.85:0,5,637	0/1:16,0:16:33.13:65,0,33	0/1:26,0:26:38.97:44,0,39	0/0:18,0:15:27.39:0,27,264	0/0:18,0:18:54.18:0,54,4026	1/1:12,0:11:29.96:453,30,0	1/1:2,13:14:9.02:265,9,0	1/1:20,0:19:6.97:107,7,0	0/1:21,0:21:44.51:68,0,45	1/1:0,28:28:15.26:978,15,0	0/1:4,24:27:11.06:964,0,11	1/1:13,0:13:18.06:1079,18,0	0/0:36,0:36:67.92:0,68,914	0/0:10,0:10:18.06:0,18,810	0/1:17,0:13:60.92:285,0,61	1/1:2,30:31:21.04:547,21,0	0/1:27,0:22:7.13:480,0,7	0/0:17,0:17:10.37:0,10,95	0/1:12,0:12:44.73:135,0,45	0/1:19,0:19:26.13:26,0,100	0/1:6,21:27:18.06:533,0,18	1/1:2,24:26:47.98:1134,48,0	1/1:1,19:20:4.57:205,5,0	1/1:5,0:5:9.19:249,9,0
chr10	59004959	.	CAA	C	2283.72	PASS	AB=1.000;AC=46;AF=0.821;AN=56;BaseQRankSum=4.990;DP=576;FS=7.453;HRun=3;HaplotypeScore=133.5454;InbreedingCoeff=0.2337;MQ=51.86;MQ0=27;MQRankSum=-2.514;QD=4.32;ReadPosRankSum=1.064;VQSLOD=-0.3108;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:37,0:36:66:82,0,66	1/1:6,0:6:8.29:49,8,0	0/0:28,0:10:22.75:0,23,169	0/1:35,0:9:4.32:4,0,41	0/1:18,0:17:26.23:105,0,26	1/1:15,0:15:5.85:35,6,0	1/1:26,0:26:8.06:49,8,0	1/1:16,0:13:10.31:178,10,0	0/0:18,0:18:51.48:0,51,595	1/1:14,0:13:32.34:239,32,0	1/1:15,0:14:2.52:15,3,0	1/1:20,0:19:11.63:70,12,0	1/1:21,0:21:12.67:78,13,0	1/1:28,0:28:13.50:68,13,0	0/1:27,0:26:2.78:58,0,3	1/1:13,0:13:17.28:91,17,0	1/1:34,0:34:61.07:426,61,0	0/1:11,0:11:27.74:28,0,96	1/1:9,8:13:16.49:143,16,0	1/1:32,0:31:7.87:50,8,0	1/1:27,0:22:36.41:242,36,0	1/1:13,0:13:14.76:96,15,0	1/1:11,0:11:8.77:52,9,0	0/1:19,0:19:9.51:12,0,10	1/1:23,0:23:11.75:74,12,0	1/1:26,0:26:26.34:158,26,0	1/1:20,0:20:2.88:15,3,0	1/1:5,0:5:6.96:22,7,0
chr10	59004961	.	A	AAC	290.93	PASS	AB=0.899;AC=16;AF=0.286;AN=56;BaseQRankSum=-1.681;DP=558;FS=0.000;HRun=0;HaplotypeScore=141.7120;InbreedingCoeff=0.3523;MQ=52.38;MQ0=24;MQRankSum=2.586;QD=1.50;ReadPosRankSum=-5.477;VQSLOD=0.5202;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:20,18:37:26.94:56,0,27	0/0:4,0:4:2.84:0,3,14	0/0:30,0:11:29.58:0,30,295	0/0:34,0:9:9.16:0,9,116	1/1:6,11:17:5.71:170,6,0	0/0:13,0:13:5.64:0,6,27	0/1:25,0:25:7.76:29,0,8	1/1:13,0:12:5.58:37,6,0	0/0:18,0:18:48.10:0,48,543	1/1:16,0:15:6:56,6,0	0/0:15,0:14:2.80:0,3,13	0/0:20,0:19:8.19:0,8,37	0/0:22,0:22:7.98:0,8,38	0/0:28,0:28:6.80:0,7,32	0/0:27,0:26:13.64:0,14,63	0/0:13,0:13:15.74:0,16,65	1/1:31,0:31:3.94:9,4,0	0/1:10,0:11:21.58:38,0,22	1/1:14,0:12:2.97:20,3,0	0/0:32,0:31:2.74:0,3,12	1/1:24,0:20:2.46:23,2,0	0/0:13,0:13:10.21:0,10,46	0/0:11,0:11:8.37:0,8,40	0/0:17,0:17:2.84:0,3,14	0/0:23,0:23:2.80:0,3,13	0/0:25,0:25:11.30:0,11,55	0/0:19,0:19:2.84:0,3,14	0/1:4,0:4:0:0,0,0
chr10	59004972	.	A	ACA	338.63	PASS	AB=0.896;AC=17;AF=0.304;AN=56;BaseQRankSum=-1.471;DP=564;FS=0.000;HRun=0;HaplotypeScore=136.4366;InbreedingCoeff=0.3584;MQ=55.14;MQ0=20;MQRankSum=1.889;QD=1.80;ReadPosRankSum=-5.262;VQSLOD=0.5250;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:37,0:37:25.69:57,0,26	0/0:3,0:3:2.84:0,3,14	0/0:41,0:19:29.58:0,30,295	0/0:39,0:13:8.44:0,8,115	1/1:19,0:18:5.71:170,6,0	0/0:14,0:14:5.64:0,6,27	0/1:24,0:24:7.76:29,0,8	1/1:16,0:15:5.58:37,6,0	0/0:17,0:17:48.10:0,48,543	1/1:13,0:12:6:56,6,0	0/0:15,0:14:2.80:0,3,13	0/0:20,0:20:8.19:0,8,37	0/0:18,0:18:7.98:0,8,38	0/0:28,0:28:6.80:0,7,32	0/0:26,0:25:13.64:0,14,63	0/0:13,0:13:15.74:0,16,65	1/1:32,0:32:3.53:8,4,0	0/1:6,4:11:18.57:82,0,19	1/1:9,0:8:2.97:20,3,0	0/0:30,0:30:2.74:0,3,12	1/1:23,0:20:2.46:23,2,0	0/0:17,0:17:10.21:0,10,46	0/0:12,0:12:8.37:0,8,40	0/0:17,0:17:2.84:0,3,14	0/0:22,0:22:2.80:0,3,13	0/0:25,0:25:11.30:0,11,55	0/0:19,0:19:2.84:0,3,14	1/1:4,0:4:2.22:7,2,0
chr10	59006156	.	CATATATATATATATATATATAT	C	12004.52	PASS	AC=20;AF=0.526;AN=38;BaseQRankSum=4.076;DP=298;FS=5.799;HRun=0;HaplotypeScore=191.7052;InbreedingCoeff=0.8179;MQ=69.93;MQ0=3;MQRankSum=-5.465;QD=68.99;ReadPosRankSum=4.193;VQSLOD=3.5488;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:5:3.01:0,3,165	./.	0/0:13,0:10:3.01:0,3,42	0/0:14,0:7:5.99:0,6,136	0/0:6,0:6:3.01:0,3,61	0/0:3,0:3:6.02:0,6,91	./.	0/0:18,0:18:39.12:0,39,1922	0/0:1,0:2:6.02:0,6,494	1/1:14,5:19:45.14:1282,45,0	1/1:7,3:10:12.04:468,12,0	./.	./.	1/1:9,7:16:21.07:1130,21,0	1/1:11,14:25:42.14:2403,42,0	1/1:8,8:16:30.09:1477,30,0	0/0:14,0:21:21.07:0,21,1252	0/0:15,0:17:33.04:0,33,2386	1/1:12,2:14:30.10:706,30,0	1/1:13,6:19:27.05:1223,27,0	./.	./.	./.	./.	1/1:11,4:15:18.06:804,18,0	1/1:18,6:24:45.15:1484,45,0	1/1:11,5:16:24.07:1028,24,0	./.
chr10	59006204	.	A	AACAC	16345.19	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=12.513;DP=448;FS=88.227;HRun=0;HaplotypeScore=154.8071;InbreedingCoeff=0.9635;MQ=70.01;MQ0=1;MQRankSum=-12.454;QD=59.44;ReadPosRankSum=3.161;VQSLOD=1.7211;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:24.53:0,25,363	0/0:5,0:5:12.03:0,12,193	0/0:13,0:10:27.07:0,27,419	0/0:23,0:19:43.73:0,44,719	0/0:9,0:9:27.08:0,27,469	0/0:14,0:14:39.11:0,39,642	0/0:5,0:5:12.04:0,12,221	0/0:23,0:23:65.97:0,66,1032	0/0:9,0:9:27.09:0,27,483	1/1:0,22:23:69.22:1703,69,0	1/1:0,15:18:45.15:950,45,0	0/0:4,0:4:12.04:0,12,216	0/0:6,0:6:18.04:0,18,299	1/1:0,27:27:75.26:1715,75,0	1/1:1,35:40:99:2471,105,0	1/1:0,22:24:63.22:1543,63,0	0/0:16,0:16:30.07:0,30,486	0/0:18,0:18:25.75:0,26,729	1/1:6,8:20:42.09:895,42,0	1/1:0,16:21:45.15:1010,45,0	1/1:3,14:19:33.11:666,33,0	0/0:4,0:4:9.02:0,9,137	0/0:5,0:5:15.05:0,15,276	0/0:8,0:8:24.08:0,24,441	1/1:0,23:25:66.23:1513,66,0	1/1:0,28:30:90.31:2289,90,0	1/1:1,17:19:54.19:1284,54,0	1/1:4,4:8:7.51:306,8,0
chr10	59006809	.	ATGAG	A	290.07	PASS	AB=0.964;AC=7;AF=0.125;AN=56;BaseQRankSum=4.115;DP=534;FS=0.000;HRun=0;HaplotypeScore=158.9100;InbreedingCoeff=-0.1500;MQ=60.17;MQ0=2;MQRankSum=-6.469;QD=2.82;ReadPosRankSum=-3.764;VQSLOD=1.2577;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:21.23:0,21,569	0/1:10,0:10:39.38:39,0,295	0/0:23,0:17:49.14:0,49,925	0/0:39,0:31:52.05:0,52,1033	0/0:23,0:23:60.19:0,60,1068	0/1:17,0:17:43.50:43,0,367	0/1:23,0:23:47.89:48,0,318	0/1:8,4:12:99:168,0,393	0/0:18,0:18:54.17:0,54,1291	0/0:21,0:21:60.12:0,60,622	0/0:17,0:17:43.26:0,43,581	0/0:28,0:28:4.33:0,4,676	0/0:22,0:22:23.18:0,23,644	0/0:21,0:21:53.52:0,54,686	0/0:21,0:21:63.08:0,63,902	0/0:14,0:14:40.98:0,41,477	0/1:13,0:13:58.60:59,0,213	0/1:14,0:14:32.56:33,0,392	0/0:12,0:12:35.77:0,36,548	0/0:17,0:17:48.07:0,48,779	0/0:35,0:34:89.56:0,90,1278	0/0:18,0:18:19.11:0,19,597	0/0:13,0:13:21.04:0,21,363	0/1:14,0:14:30.87:31,0,176	0/0:15,0:15:41.33:0,41,598	0/0:24,0:24:64.09:0,64,983	0/0:19,0:19:56.58:0,57,669	0/0:10,0:10:23.75:0,24,221
chr10	59006817	.	G	GGGGAGGAA	6592.75	PASS	AB=0.596;AC=15;AF=0.268;AN=56;BaseQRankSum=-4.959;DP=573;FS=25.313;HRun=0;HaplotypeScore=173.8691;InbreedingCoeff=0.0697;MQ=55.83;MQ0=2;MQRankSum=-8.071;QD=23.89;ReadPosRankSum=2.086;VQSLOD=3.0013;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:8,0:25:99:217,0,108	0/1:2,0:11:8.93:514,0,9	0/0:21,0:16:44.58:0,45,579	0/0:31,0:25:47.11:0,47,686	1/1:0,1:26:13.24:269,13,0	0/1:5,0:16:71:614,0,71	0/1:6,0:33:66.42:616,0,66	0/1:18,0:18:5.20:532,0,5	0/0:17,0:17:51.07:0,51,1106	0/0:22,0:22:60.12:0,60,983	0/0:16,0:16:23.95:0,24,634	1/1:3,0:30:16.42:1285,16,0	0/1:3,0:21:49:739,0,49	0/0:18,0:18:47.84:0,48,678	0/0:21,0:21:49.10:0,49,661	0/0:13,0:13:36.06:0,36,581	0/1:3,0:19:38:425,0,38	0/1:4,0:15:29.91:539,0,30	0/0:14,0:14:36.33:0,36,409	0/0:16,0:16:32.72:0,33,422	0/0:38,0:37:71.37:0,71,872	0/1:2,0:23:21.61:491,0,22	0/1:2,0:18:30.55:31,0,33	0/1:4,0:21:4.36:320,0,4	0/0:16,0:16:36.07:0,36,524	0/0:23,0:23:27.57:0,28,728	0/0:20,0:20:45.39:0,45,694	0/0:9,0:9:24.06:0,24,428
chr10	59006832	.	ACGG	A	4431.54	PASS	AB=0.754;AC=20;AF=0.357;AN=56;BaseQRankSum=4.449;DP=571;FS=7.389;HRun=0;HaplotypeScore=150.8951;InbreedingCoeff=0.5075;MQ=53.20;MQ0=0;MQRankSum=4.152;QD=16.91;ReadPosRankSum=5.479;VQSLOD=4.0099;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:24.06:0,24,411	0/0:13,0:14:27.09:0,27,492	0/0:12,0:8:22.25:0,22,330	0/0:16,0:13:21:0,21,474	0/1:27,0:27:0.17:0,0,503	0/0:13,0:13:27.09:0,27,473	0/0:35,0:35:38.58:0,39,696	0/0:25,0:25:74.55:0,75,1259	0/0:22,0:22:66.22:0,66,1405	1/1:6,18:24:54.73:654,55,0	1/1:5,11:16:3.52:370,4,0	0/0:28,0:28:44.92:0,45,732	0/0:21,0:21:29.61:0,30,476	1/1:5,12:17:5.78:338,6,0	0/1:16,9:25:36.22:379,0,36	1/1:1,9:10:15.01:294,15,0	0/0:17,0:17:21.02:0,21,319	0/0:17,0:17:36.07:0,36,659	0/1:11,6:17:89.76:216,0,90	0/1:10,8:18:17.95:236,0,18	0/1:21,17:37:99:440,0,115	0/0:20,0:20:12.72:0,13,349	0/0:18,0:18:14.77:0,15,312	0/0:27,0:27:36.12:0,36,692	0/1:9,9:18:32.79:300,0,33	1/1:11,11:22:34.68:482,35,0	1/1:9,11:20:14.41:439,14,0	1/1:2,8:10:29.36:285,29,0
chr10	59006836	.	AC	A	2070.94	PASS	AB=0.672;AC=17;AF=0.304;AN=56;BaseQRankSum=5.138;DP=573;FS=1.323;HRun=1;HaplotypeScore=142.9843;InbreedingCoeff=0.3491;MQ=53.54;MQ0=0;MQRankSum=2.448;QD=8.93;ReadPosRankSum=9.524;VQSLOD=0.4826;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:27.08:0,27,384	0/0:15,0:15:30.10:0,30,445	0/0:13,0:10:29.76:0,30,359	0/0:14,0:11:29.87:0,30,370	0/0:25,0:25:29.99:0,30,384	0/0:12,0:12:27.09:0,27,397	0/0:35,0:35:39.13:0,39,586	0/0:29,0:29:73.46:0,73,998	0/0:25,0:25:72.12:0,72,1056	1/1:7,17:24:27.46:335,27,0	1/1:5,11:16:5.30:187,5,0	0/0:27,0:27:45.35:0,45,641	0/0:21,0:21:32.82:0,33,475	0/1:5,12:17:44.69:159,0,45	0/1:17,9:26:99:197,0,135	1/1:2,9:11:3.91:180,4,0	0/0:18,0:18:18.05:0,18,265	0/0:18,0:18:36.12:0,36,551	0/1:11,6:17:99:102,0,172	0/1:8,8:16:74.67:97,0,75	0/1:19,17:35:99:203,0,227	0/0:19,0:19:20.07:0,20,249	0/0:19,0:19:15.03:0,15,216	0/0:26,0:26:39.09:0,39,573	0/1:9,9:18:88.76:144,0,89	1/1:12,11:23:37.41:304,37,0	0/1:7,11:18:31.90:191,0,32	1/1:2,8:10:23.54:154,24,0
chr10	59007863	.	GCC	G	5176.33	PASS	AB=0.913;AC=25;AF=0.446;AN=56;BaseQRankSum=-0.321;DP=398;FS=12.769;HRun=10;HaplotypeScore=84.2280;InbreedingCoeff=0.8848;MQ=84.35;MQ0=0;MQRankSum=-2.917;QD=24.30;ReadPosRankSum=3.988;VQSLOD=3.0780;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:3,1:19:7.09:0,7,96	0/0:2,0:3:2.50:0,2,9	0/1:19,0:17:6.06:6,0,312	0/0:17,0:17:21.42:0,21,261	0/0:3,0:9:17.97:0,18,75	0/0:2,0:10:12.48:0,12,43	0/0:5,0:21:40.44:0,40,176	0/0:5,0:17:33.07:0,33,131	0/0:7,0:7:18.05:0,18,265	1/1:2,15:17:36.87:460,37,0	1/1:1,6:7:15.04:167,15,0	0/0:0,0:11:17.01:0,17,60	0/0:2,0:8:14.97:0,15,51	1/1:4,15:19:45.03:500,45,0	1/1:2,12:14:30.04:334,30,0	1/1:1,15:16:45.09:502,45,0	0/0:0,0:13:29.94:0,30,103	0/0:4,0:14:24.95:0,25,86	1/1:2,15:17:45.04:490,45,0	1/1:4,11:15:36.01:373,36,0	1/1:6,25:31:59.41:649,59,0	0/0:3,0:11:22.96:0,23,94	0/0:0,0:4:9.98:0,10,34	0/0:2,0:20:39.92:0,40,137	1/1:3,12:15:39.03:426,39,0	1/1:0,18:18:54.15:600,54,0	1/1:1,17:18:45.12:502,45,0	1/1:0,5:5:15.04:167,15,0
chr10	59009266	.	C	CT	5149.44	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=1.476;DP=679;FS=7.287;HRun=9;HaplotypeScore=130.9870;InbreedingCoeff=0.9944;MQ=72.69;MQ0=0;MQRankSum=-9.110;QD=24.18;ReadPosRankSum=-2.166;VQSLOD=3.0786;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:95.93:0,96,826	1/1:0,5:5:15.04:166,15,0	0/0:13,0:15:28.04:0,28,216	0/0:20,0:19:41.25:0,41,334	0/0:30,1:31:68.77:0,69,579	1/1:3,21:24:58.04:632,58,0	1/1:4,22:26:63.08:669,63,0	1/1:14,26:40:85.09:912,85,0	0/0:25,0:25:65.98:0,66,573	0/0:41,0:41:99:0,111,964	0/0:16,1:17:17.79:0,18,380	1/1:4,17:21:22.52:472,23,0	1/1:4,17:21:45.04:471,45,0	0/0:34,0:34:59.83:0,60,679	0/0:37,0:37:98.95:0,99,859	0/0:30,1:31:41.76:0,42,585	1/1:8,18:26:43.30:465,43,0	0/0:21,0:21:38.96:0,39,334	0/0:23,0:24:53.01:0,53,449	0/0:17,0:18:38.01:0,38,318	0/0:26,0:26:68.94:0,69,588	1/1:1,15:16:45.12:495,45,0	1/1:4,17:21:51.06:537,51,0	1/1:1,12:13:30.08:332,30,0	0/0:16,0:16:35.96:0,36,313	0/0:27,1:28:44.80:0,45,615	0/0:32,1:34:46.79:0,47,624	0/0:7,0:7:17.99:0,18,156
chr10	59009299	.	G	GAA	9466.96	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=20.431;DP=642;FS=13.304;HRun=1;HaplotypeScore=199.2354;InbreedingCoeff=0.9932;MQ=75.73;MQ0=0;MQRankSum=-19.874;QD=38.17;ReadPosRankSum=-2.807;VQSLOD=2.4754;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:32:90.17:1010,90,0	1/1:2,3:5:15.05:211,15,0	0/0:30,0:30:83.69:0,84,1148	0/0:21,0:20:51.12:0,51,699	1/1:7,0:28:81.14:880,81,0	1/1:4,16:20:60.20:880,60,0	1/1:8,17:25:75.25:1120,75,0	1/1:18,13:31:78.26:1178,78,0	0/0:29,0:29:87.30:0,87,1332	0/0:32,0:32:93.32:0,93,1424	0/0:18,0:18:51.17:0,51,780	1/1:5,10:15:42.14:609,42,0	1/1:5,7:13:39.12:545,39,0	0/0:30,0:30:87.30:0,87,1330	0/0:45,0:45:99:0,132,2000	0/0:35,0:35:99:0,105,1584	1/1:8,7:15:36.12:545,36,0	1/1:4,0:10:24.05:253,24,0	0/0:11,0:11:33.11:0,33,505	0/0:20,0:20:60.20:0,60,916	0/0:28,0:28:84.29:0,84,1286	1/1:8,19:27:81.27:1166,81,0	1/1:5,9:14:42.11:599,42,0	1/1:5,8:13:33.11:471,33,0	0/0:18,0:18:51.17:0,51,781	0/0:33,0:33:93.29:0,93,1400	0/0:40,0:40:99:0,120,1814	0/0:4,0:4:12.04:0,12,178
chr10	59009305	.	T	TC	3736.90	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=17.662;DP=547;FS=15.953;HRun=0;HaplotypeScore=142.4827;InbreedingCoeff=0.9854;MQ=77.71;MQ0=0;MQRankSum=-17.300;QD=23.80;ReadPosRankSum=1.260;VQSLOD=3.0753;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:17:38.84:177,39,0	1/1:0,3:3:9.02:95,9,0	0/0:25,0:25:62.34:0,62,927	0/0:18,0:17:44.98:0,45,588	1/1:19,0:19:49.58:225,50,0	1/1:1,16:17:48.11:504,48,0	1/1:1,17:18:51.11:536,51,0	1/1:1,13:14:36.09:388,36,0	0/0:29,0:29:87.27:0,87,1198	0/0:31,0:30:93.27:0,93,1264	0/0:18,0:18:54.18:0,54,754	1/1:0,10:10:27.06:280,27,0	1/1:1,7:8:22.84:209,23,0	0/0:28,0:28:84.28:0,84,1174	0/0:47,0:47:99:0,141,1937	0/0:33,0:33:96.32:0,96,1342	1/1:3,7:10:21.05:220,21,0	1/1:5,0:5:14.21:79,14,0	0/0:12,0:12:36.11:0,36,488	0/0:23,0:23:69.21:0,69,933	0/0:29,0:29:87.29:0,87,1215	1/1:0,19:19:57.09:558,57,0	1/1:0,9:9:27.02:256,27,0	1/1:0,8:8:21.04:209,21,0	0/0:18,0:18:54.18:0,54,754	0/0:32,0:32:96.32:0,96,1341	0/0:42,0:42:99:0,123,1686	0/0:5,0:5:15.05:0,15,209
chr10	59010942	.	T	TCACACACACACACACA	13755.79	PASS	AB=1.000;AC=51;AF=0.911;AN=56;BaseQRankSum=0.878;DP=744;FS=9.216;HRun=0;HaplotypeScore=246.8489;InbreedingCoeff=0.4015;MQ=57.55;MQ0=18;MQRankSum=-3.162;QD=20.94;ReadPosRankSum=-2.744;VQSLOD=2.0182;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:32,0:31:23.57:509,24,0	1/1:8,0:8:15.05:573,15,0	0/0:61,0:20:14.26:0,14,262	0/1:52,0:31:51.13:51,0,247	1/1:19,0:19:24.07:572,24,0	1/1:7,0:28:3.01:169,3,0	1/1:12,0:35:3.48:106,3,0	1/1:28,0:28:46.70:1307,47,0	0/0:25,0:26:66.01:0,66,2638	1/1:3,0:26:45.07:1070,45,0	1/1:8,0:17:3.01:89,3,0	1/1:9,7:31:3.01:228,3,0	1/1:6,7:21:9.03:651,9,0	1/1:3,0:18:9.03:306,9,0	1/1:9,0:28:15.52:646,16,0	1/1:6,0:33:15.52:511,16,0	1/1:19,0:20:30.09:1095,30,0	1/1:22,0:23:3.33:475,3,0	1/1:19,0:19:51.11:1178,51,0	1/1:13,0:30:10.88:423,11,0	1/1:15,0:32:27.06:784,27,0	1/1:24,0:24:15.05:362,15,0	1/1:4,9:19:3.01:227,3,0	1/1:12,8:31:3.48:155,3,0	1/1:11,0:27:15.05:604,15,0	1/1:6,0:27:39.09:1011,39,0	1/1:2,0:18:14.63:564,15,0	1/1:2,0:11:3.01:89,3,0
chr10	59011953	.	CTGTGTGTG	C	5506.77	PASS	AB=0.905;AC=36;AF=0.692;AN=52;BaseQRankSum=4.918;DP=662;FS=1.483;HRun=0;HaplotypeScore=181.9718;InbreedingCoeff=0.6669;MQ=69.10;MQ0=15;MQRankSum=-3.431;QD=12.24;ReadPosRankSum=1.104;VQSLOD=3.9115;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:33:6.02:0,6,207	./.	./.	0/1:54,0:30:17.70:18,0,241	0/0:23,0:18:6.02:0,6,198	1/1:9,1:10:9.01:128,9,0	1/1:19,3:22:9.03:187,9,0	0/0:21,0:19:30.10:0,30,864	0/0:28,0:28:48.16:0,48,1575	1/1:23,3:27:12.15:354,12,0	0/1:13,3:17:8.75:211,0,9	1/1:12,6:19:17.99:387,18,0	1/1:19,5:23:17.99:359,18,0	1/1:14,5:19:18.02:351,18,0	1/1:23,5:29:27.06:482,27,0	1/1:14,8:23:30.10:730,30,0	0/0:20,0:19:12.03:0,12,229	0/0:13,0:13:18.06:0,18,600	1/1:22,1:20:2.84:76,3,0	1/1:11,10:21:17.93:444,18,0	1/1:39,4:41:8.90:185,9,0	1/1:15,2:18:15.05:280,15,0	1/1:14,7:21:23.86:291,24,0	1/1:27,4:31:12.03:216,12,0	1/1:6,1:8:8.96:150,9,0	1/1:13,1:15:9.02:158,9,0	1/1:13,11:24:26.62:501,27,0	0/0:11,0:11:4.49:0,4,189
chr10	59012025	.	C	CTG	202.62	PASS	AB=0.976;AC=12;AF=0.214;AN=56;BaseQRankSum=9.351;DP=654;FS=0.000;HRun=0;HaplotypeScore=248.5651;InbreedingCoeff=-0.2329;MQ=56.80;MQ0=27;MQRankSum=-5.904;QD=0.91;ReadPosRankSum=8.116;VQSLOD=1.7302;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:22:2.92:0,3,17	0/1:7,0:7:6.11:32,0,6	0/0:64,0:18:12.49:0,12,165	0/0:86,0:35:29.27:0,29,243	0/0:16,0:16:9.18:0,9,66	0/0:16,0:16:5.44:0,5,168	0/0:21,0:20:3.43:0,3,133	0/1:15,0:13:0.27:0,0,36	0/0:19,0:19:42.75:0,43,413	0/0:26,0:26:7.53:0,8,218	0/0:11,0:11:0.50:0,1,69	0/1:24,0:23:1.63:2,0,167	0/0:19,0:19:24.46:0,24,228	0/1:20,0:18:26.07:26,0,64	0/1:26,0:25:14.87:15,0,124	0/1:28,0:27:21.04:21,0,99	0/1:6,4:9:65.15:161,0,65	0/0:6,0:6:3.61:0,4,55	0/1:18,0:14:6.44:6,0,149	0/1:17,0:16:2.46:2,0,60	0/0:36,0:34:36.07:0,36,309	0/0:28,0:28:11.67:0,12,230	0/0:19,0:18:14.68:0,15,137	0/1:20,0:20:2.07:2,0,43	0/0:23,0:23:22.80:0,23,274	0/1:17,0:16:3.73:4,0,187	0/0:17,0:17:15.72:0,16,187	0/1:21,0:21:41.68:56,0,42
chr10	59012027	.	C	CTG	1406.20	PASS	AB=0.969;AC=21;AF=0.375;AN=56;BaseQRankSum=7.075;DP=646;FS=0.000;HRun=0;HaplotypeScore=241.1007;InbreedingCoeff=-0.0481;MQ=56.15;MQ0=27;MQRankSum=-2.922;QD=4.14;ReadPosRankSum=6.772;VQSLOD=2.1336;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:22:2.92:0,3,17	0/1:7,0:7:6.92:32,0,7	0/0:63,0:16:24.92:0,25,207	0/0:88,0:36:4.36:0,4,206	0/0:17,0:17:8.77:0,9,70	0/1:15,1:16:7.51:59,0,8	0/1:16,4:19:1.56:184,0,2	0/1:15,0:13:18.95:21,0,19	0/0:19,0:19:45.77:0,46,441	0/1:25,0:25:1.06:1,0,161	0/1:11,0:11:2.62:3,0,44	0/1:17,5:21:0.31:202,0,0	0/1:16,1:17:25.43:71,0,25	0/1:21,0:19:22.69:23,0,70	1/1:26,0:25:5.53:266,6,0	0/1:30,0:29:29.01:29,0,97	0/1:10,0:9:44.09:162,0,44	0/0:5,0:5:4.53:0,5,57	0/1:18,0:14:2.54:3,0,116	0/1:16,0:15:4.54:5,0,40	0/0:34,0:32:10.21:0,10,201	1/1:25,3:28:20.01:220,20,0	0/0:15,2:16:8.34:0,8,38	1/1:13,7:20:9.05:218,9,0	0/0:23,0:23:20.34:0,20,204	0/1:17,0:16:16.50:16,0,122	0/0:17,0:17:11.05:0,11,136	0/1:21,0:21:28.59:51,0,29
chr10	59012029	.	C	CTCTCTG	7673.42	PASS	AB=0.975;AC=30;AF=0.536;AN=56;BaseQRankSum=-4.873;DP=663;FS=10.950;HRun=0;HaplotypeScore=256.8122;InbreedingCoeff=0.3862;MQ=57.31;MQ0=27;MQRankSum=-2.591;QD=20.80;ReadPosRankSum=-0.152;VQSLOD=2.9856;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:26:5.43:0,5,24	0/1:7,0:7:31.69:32,0,42	0/0:62,0:14:9.14:0,9,92	0/0:91,0:38:16.70:0,17,244	0/1:17,0:17:35.97:38,0,36	0/1:16,0:17:1.99:2,0,171	0/1:20,0:19:1.18:1,0,183	0/0:14,0:12:13.93:0,14,261	0/0:20,0:20:24.31:0,24,548	1/1:21,3:25:58.55:927,59,0	1/1:7,3:11:9.36:241,9,0	0/1:21,0:20:60.86:61,0,102	0/1:17,0:17:12.57:13,0,279	1/1:15,6:19:29.28:852,29,0	1/1:21,0:27:47.98:789,48,0	0/1:25,0:29:23.83:699,0,24	0/0:13,0:12:2.46:0,2,158	0/1:5,0:5:7.27:130,0,7	1/1:15,1:14:28.15:460,28,0	1/1:14,2:16:18.01:337,18,0	1/1:31,1:33:35.71:575,36,0	0/0:28,0:28:1.50:0,1,212	0/0:18,0:17:11.87:0,12,154	0/0:21,0:21:8.06:0,8,56	1/1:21,1:23:27.43:445,27,0	1/1:14,2:18:20.11:589,20,0	1/1:14,2:17:11.90:318,12,0	1/1:12,7:21:48.01:1164,48,0
chr10	59012048	.	TGA	T	1727.83	PASS	AB=0.984;AC=29;AF=0.518;AN=56;BaseQRankSum=-5.411;DP=639;FS=9.736;HRun=0;HaplotypeScore=229.5894;InbreedingCoeff=-0.5924;MQ=59.02;MQ0=20;MQRankSum=1.794;QD=2.88;ReadPosRankSum=-4.983;VQSLOD=0.4753;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:25:14.53:95,15,0	0/1:9,0:8:15.73:22,0,16	0/1:63,0:17:70.35:70,0,133	0/1:97,0:34:22.03:22,0,244	0/1:18,0:18:2.75:25,0,3	0/1:16,0:16:49.28:82,0,49	0/1:17,0:15:36.66:76,0,37	0/1:15,0:10:11.15:152,0,11	1/1:17,4:21:50.41:513,50,0	0/1:22,0:21:64.89:65,0,111	0/1:11,0:11:27.46:31,0,27	0/1:22,0:21:45.60:46,0,63	0/1:13,0:13:3.93:4,0,71	0/0:16,0:16:4.09:0,4,78	0/0:24,0:23:7.58:0,8,88	0/1:26,0:24:41.01:41,0,48	0/1:14,0:13:14.06:14,0,87	0/1:2,1:3:8.23:27,0,8	0/1:19,0:16:25.57:118,0,26	1/1:19,0:18:3.46:177,3,0	0/1:33,0:31:85.23:85,0,133	0/1:21,0:21:27.42:62,0,27	0/1:14,1:15:37.13:66,0,37	0/1:21,0:21:7.86:14,0,8	0/1:24,0:24:14.79:15,0,32	0/1:19,0:20:46.95:47,0,87	0/1:13,0:13:7.85:8,0,62	0/1:20,0:20:5:5,0,38
chr10	59012065	.	TTCTCTC	T	720.40	PASS	AB=0.906;AC=14;AF=0.250;AN=56;BaseQRankSum=3.440;DP=622;FS=5.212;HRun=0;HaplotypeScore=223.1903;InbreedingCoeff=0.6404;MQ=55.94;MQ0=22;MQRankSum=-2.646;QD=6.67;ReadPosRankSum=-1.281;VQSLOD=2.2815;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:28:5.96:0,6,56	0/0:4,0:3:6.01:0,6,76	0/0:64,0:15:16.14:0,16,227	0/0:99,0:31:4.57:0,5,312	0/0:17,0:19:6.01:0,6,100	1/1:5,4:9:5.85:36,6,0	1/1:11,3:13:14.98:236,15,0	0/0:16,0:12:6.60:0,7,176	0/0:23,0:23:51.11:0,51,1025	0/0:24,0:23:45.05:0,45,964	0/0:11,0:11:15.05:0,15,315	1/1:9,6:14:14.98:253,15,0	1/1:6,3:9:0.15:94,0,0	0/0:16,0:16:30.08:0,30,627	0/0:24,0:22:27.07:0,27,602	0/0:20,0:19:11.52:0,12,252	0/1:14,0:14:30.78:31,0,318	0/0:5,0:4:6.02:0,6,160	0/0:23,0:22:42.78:0,43,933	0/0:21,0:21:30.10:0,30,677	0/0:30,0:30:38.76:0,39,793	1/1:14,6:20:6.02:103,6,0	1/1:9,5:13:8.88:129,9,0	0/1:10,3:13:0:0,0,0	0/0:25,0:24:51.04:0,51,1177	0/0:26,0:24:14.27:0,14,866	0/0:13,0:13:29.72:0,30,444	0/0:20,0:20:17.09:0,17,324
chr10	59012083	.	CTCTCTCTGTGTGTGTG	C	1633.29	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=2.279;DP=624;FS=4.637;HRun=0;HaplotypeScore=259.8540;InbreedingCoeff=0.5914;MQ=43.18;MQ0=33;MQRankSum=-2.790;QD=11.42;ReadPosRankSum=-0.801;VQSLOD=2.2056;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:34:8.99:0,9,125	0/0:5,0:4:6.01:0,6,206	0/0:44,0:8:15.26:0,15,225	0/0:54,0:11:3.68:0,4,311	0/1:23,0:19:28.92:29,0,91	1/1:7,1:8:5.64:35,6,0	1/1:24,0:20:18.46:411,18,0	0/0:16,0:12:9.61:0,10,256	0/0:25,0:25:62.87:0,63,2332	0/0:31,0:29:64.89:0,65,1323	0/0:17,0:17:19.77:0,20,440	1/1:11,3:14:24.08:721,24,0	1/1:13,0:12:11.82:274,12,0	0/0:20,0:18:30.08:0,30,785	0/0:24,0:23:30.10:0,30,784	0/0:26,0:24:45.31:0,45,909	0/1:15,0:14:25.93:26,0,1069	0/1:6,0:5:11.88:12,0,277	0/0:25,0:21:56.94:0,57,1062	0/0:22,0:21:32.60:0,33,707	0/0:34,0:31:48.93:0,49,1381	1/1:20,1:22:5.29:172,5,0	1/1:17,0:16:8.99:129,9,0	0/0:15,2:16:0.47:0,0,1	0/0:26,0:24:27.04:0,27,1325	0/0:28,0:26:74.70:0,75,1619	0/0:19,0:17:34.35:0,34,888	0/0:10,0:9:21.07:0,21,598
chr10	59012089	.	CTGTGTGTGTG	C	926.07	PASS	AB=0.982;AC=16;AF=0.308;AN=52;BaseQRankSum=3.020;DP=586;FS=0.000;HRun=0;HaplotypeScore=213.2281;InbreedingCoeff=0.3191;MQ=40.88;MQ0=35;MQRankSum=-2.526;QD=4.72;ReadPosRankSum=-1.239;VQSLOD=2.3386;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:37:3.01:0,3,70	0/0:5,0:4:3.01:0,3,118	./.	./.	1/1:21,0:17:2.50:37,3,0	0/0:7,0:7:0:0,0,0	1/1:21,4:20:6:170,6,0	0/0:18,0:15:15.05:0,15,397	0/0:23,0:23:36.52:0,37,1050	0/0:26,0:25:16.64:0,17,108	0/0:16,0:17:7.13:0,7,80	1/1:11,2:13:18.06:443,18,0	1/1:12,2:13:8.71:225,9,0	0/0:20,0:18:7.25:0,7,79	0/0:21,0:22:6.02:0,6,81	0/0:21,0:20:19.41:0,19,342	0/0:15,0:14:16.66:0,17,756	0/1:7,0:5:14.89:15,0,136	0/1:24,0:18:18.72:19,0,19	0/1:22,0:21:4.62:7,0,5	0/0:36,0:33:27.80:0,28,485	1/1:16,2:21:2.90:70,3,0	0/1:13,1:13:0:0,0,0	0/0:14,2:14:0.47:0,0,1	0/1:23,0:23:57.38:60,0,57	0/0:28,0:28:34.13:0,34,306	0/0:18,0:15:6.33:0,6,196	0/1:10,0:9:29.44:29,0,94
chr10	59012354	.	GAC	G	2143.83	PASS	AB=0.940;AC=14;AF=0.250;AN=56;BaseQRankSum=10.477;DP=771;FS=0.871;HRun=0;HaplotypeScore=100.9253;InbreedingCoeff=0.2537;MQ=65.29;MQ0=8;MQRankSum=-0.761;QD=6.78;ReadPosRankSum=0.419;VQSLOD=3.3793;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:18,48:66:99:1466,126,0	0/0:7,0:7:12.04:0,12,193	0/0:36,0:25:32.76:0,33,405	0/1:56,0:39:2.68:3,0,623	1/1:1,10:13:20.73:210,21,0	0/1:19,2:21:26.16:26,0,604	0/0:34,2:36:11.45:0,11,1155	0/1:36,3:39:43.03:43,0,824	0/0:26,1:27:32.83:0,33,1017	0/1:19,2:21:21.64:22,0,636	0/0:15,0:15:21.07:0,21,338	0/0:26,0:26:75.23:0,75,1167	0/0:29,0:29:69.17:0,69,1077	0/0:21,1:22:2.73:0,3,544	0/0:31,1:32:38.84:0,39,1125	0/0:34,1:35:47.81:0,48,1217	0/0:33,3:37:14.50:0,15,1212	1/1:7,19:25:35.93:500,36,0	0/1:25,2:27:18.67:19,0,677	0/1:9,1:10:12.33:12,0,315	0/0:42,2:44:35.67:0,36,1549	0/0:21,1:22:8.74:0,9,591	0/0:8,0:8:21.07:0,21,298	0/0:49,2:51:62.62:0,63,1971	0/1:19,0:19:0.28:0,0,496	0/0:19,2:21:8.71:0,9,594	0/1:12,1:13:6.31:6,0,405	0/0:7,0:7:12.04:0,12,193
chr10	59013921	.	TAATG	T	8296.57	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-4.308;DP=668;FS=4.162;HRun=0;HaplotypeScore=152.0494;InbreedingCoeff=0.9478;MQ=60.65;MQ0=1;MQRankSum=9.147;QD=27.38;ReadPosRankSum=5.601;VQSLOD=4.4973;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:37:53.65:0,54,649	0/0:4,0:12:27.09:0,27,459	0/0:11,0:9:6.02:0,6,145	0/0:11,0:9:3.01:0,3,72	0/0:21,0:43:65.30:0,65,969	0/0:10,0:25:23.96:0,24,549	0/0:9,0:15:15.05:0,15,221	0/0:41,0:36:48.15:0,48,836	0/0:15,0:15:30.10:0,30,722	1/1:7,22:29:66.21:1024,66,0	1/1:6,23:29:63.21:1011,63,0	0/0:6,0:20:39.06:0,39,642	0/0:11,0:17:33.11:0,33,504	1/1:13,3:16:9.03:145,9,0	1/1:11,18:29:45.15:722,45,0	1/1:9,15:24:39.13:626,39,0	0/0:17,0:25:30.04:0,30,394	0/0:12,0:31:57.17:0,57,997	1/1:6,8:14:24.06:357,24,0	1/1:13,11:24:24.08:373,24,0	1/1:6,19:25:48.16:771,48,0	0/0:14,0:22:35.56:0,36,543	0/0:17,0:26:26.05:0,26,363	0/0:7,0:13:16.28:0,16,221	1/1:9,23:33:63.21:991,63,0	1/1:9,19:28:57.17:882,57,0	1/1:14,22:36:60.20:961,60,0	1/1:6,10:16:27.09:433,27,0
chr10	59015660	.	TCATACACACACACACA	T	2721.75	PASS	AB=0.990;AC=22;AF=0.393;AN=56;BaseQRankSum=2.456;DP=470;FS=11.107;HRun=0;HaplotypeScore=188.5660;InbreedingCoeff=0.5839;MQ=77.67;MQ0=4;MQRankSum=-3.642;QD=12.96;ReadPosRankSum=1.226;VQSLOD=1.3585;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:30:99:133,0,366	1/1:0,0:6:6.49:162,6,0	0/0:34,0:26:58.72:0,59,636	0/0:39,0:35:79.72:0,80,756	0/1:13,0:13:27.95:28,0,514	1/1:1,10:11:9.03:423,9,0	1/1:1,22:22:3.01:69,3,0	1/1:12,0:12:28.54:251,29,0	0/0:8,0:8:14.05:0,14,253	0/0:16,0:16:44.44:0,44,1581	0/0:12,0:12:27.03:0,27,947	1/1:0,13:13:9.03:360,9,0	1/1:8,0:9:23.88:280,24,0	0/0:17,0:17:41.02:0,41,1731	0/0:22,0:22:65.81:0,66,2078	0/0:9,0:9:24.02:0,24,705	1/1:16,0:19:38.97:488,39,0	0/1:19,0:19:99:150,0,809	0/0:15,0:15:41.83:0,42,915	0/0:9,0:9:18.04:0,18,755	0/0:26,0:26:57:0,57,2050	1/1:0,16:16:5.48:249,5,0	1/1:0,13:13:1.90:121,2,0	0/1:24,1:25:99:204,0,170	0/0:18,0:18:40.61:0,41,1323	0/0:16,0:16:48:0,48,1145	0/0:7,0:6:18:0,18,507	0/0:12,0:12:33.10:0,33,2211
chr10	59015663	.	TAC	T	251.42	PASS	AB=0.934;AC=28;AF=0.583;AN=48;BaseQRankSum=5.399;DP=507;FS=19.820;HRun=0;HaplotypeScore=99.8896;InbreedingCoeff=0.1643;MQ=70.63;MQ0=5;MQRankSum=-2.683;QD=0.86;ReadPosRankSum=5.501;VQSLOD=-0.3741;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:37,0:36:0.24:0,0,0	1/1:6,0:6:5.37:25,5,0	./.	./.	0/0:16,0:16:5.99:0,6,49	1/1:10,0:10:8.52:42,9,0	./.	./.	1/1:4,0:8:5.68:28,6,0	0/0:21,0:20:21.01:0,21,232	0/1:11,2:13:20.04:20,0,82	1/1:13,0:13:5.68:28,6,0	1/1:10,0:10:2.51:14,3,0	0/1:18,1:19:8.03:8,0,223	0/1:25,1:27:25.12:25,0,140	1/1:8,1:12:8.64:78,9,0	1/1:21,0:20:8.52:42,9,0	0/0:22,0:22:11.89:0,12,117	1/1:16,0:15:1.50:4,2,0	0/0:13,0:13:14.56:0,15,137	0/1:26,3:29:15.06:15,0,98	1/1:16,0:16:1.70:4,2,0	1/1:14,0:14:0.32:1,0,0	0/0:24,0:24:3.01:0,3,38	0/1:18,0:19:4.18:4,0,77	0/0:20,0:20:9.03:0,9,81	0/1:10,0:9:22.39:22,0,63	0/1:11,2:13:37.04:37,0,278
chr10	59015699	.	C	CACAT	408.23	PASS	AB=0.731;AC=3;AF=0.054;AN=56;BaseQRankSum=4.532;DP=617;FS=5.351;HRun=0;HaplotypeScore=136.8486;InbreedingCoeff=0.1394;MQ=54.09;MQ0=12;MQRankSum=0.415;QD=4.17;ReadPosRankSum=1.313;VQSLOD=2.3552;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:45,0:44:2.74:298,0,3	0/0:14,0:14:18.17:0,18,177	0/0:28,0:15:36.03:0,36,366	0/0:14,0:8:15.01:0,15,150	0/1:9,0:25:12.98:147,0,13	0/0:20,0:20:24.94:0,25,235	0/0:29,0:27:29.50:0,30,238	0/0:21,0:21:53.56:0,54,438	0/0:7,0:7:14.99:0,15,139	0/0:19,0:19:52.94:0,53,525	0/0:18,0:18:31.87:0,32,311	0/0:26,0:25:47.64:0,48,388	0/0:7,0:7:15.86:0,16,135	0/0:30,0:28:77.87:0,78,723	0/0:27,0:27:62.94:0,63,599	0/0:20,0:20:41.90:0,42,358	0/0:26,0:25:47.61:0,48,395	0/1:8,18:28:62.91:63,0,75	0/0:19,0:19:52.01:0,52,431	0/0:16,0:16:29.42:0,29,237	0/0:41,0:40:67.14:0,67,568	0/0:23,0:23:13.85:0,14,161	0/0:12,0:12:1.61:0,2,42	0/0:24,0:24:38.75:0,39,293	0/0:18,0:18:32.68:0,33,325	0/0:21,0:21:56.63:0,57,471	0/0:16,0:15:40.16:0,40,376	0/0:23,0:23:60.76:0,61,688
chr10	59017302	.	GAGCCCCC	G	12646.53	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=16.284;DP=678;FS=13.501;HRun=0;HaplotypeScore=172.4784;InbreedingCoeff=0.9986;MQ=81.47;MQ0=2;MQRankSum=-17.552;QD=57.75;ReadPosRankSum=-1.225;VQSLOD=3.6937;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:58:99:0,175,6662	1/1:2,9:9:27.09:727,27,0	0/0:23,0:23:66.23:0,66,2431	0/0:22,0:22:63.17:0,63,2281	0/0:24,0:24:69.22:0,69,2618	1/1:0,28:28:69.24:1804,69,0	1/1:1,21:22:48.12:1231,48,0	1/1:5,29:34:84.27:2047,84,0	0/0:33,0:33:99:0,99,3895	0/0:44,0:44:99:0,129,5272	0/0:16,0:16:48.15:0,48,1784	1/1:0,22:22:57.20:1491,57,0	1/1:0,19:19:41.92:1131,42,0	0/0:19,0:19:54.19:0,54,2129	0/0:29,0:29:84.27:0,84,3271	0/0:24,0:24:72.23:0,72,2779	1/1:2,22:24:48.16:1181,48,0	0/0:25,0:25:72.20:0,72,2769	0/0:17,0:17:51.18:0,51,2021	0/0:22,0:22:63.20:0,63,2471	0/0:29,0:29:87.30:0,87,3485	1/1:0,22:22:51.13:1226,51,0	1/1:0,16:16:39.13:981,39,0	1/1:3,18:21:33.07:828,33,0	0/0:23,0:23:69.23:0,69,2577	0/0:20,0:20:57.20:0,57,2104	0/0:25,0:25:75.26:0,75,3061	0/0:6,0:6:18.06:0,18,680
chr10	59020757	.	GAC	G	4597.62	PASS	AB=0.774;AC=29;AF=0.537;AN=54;BaseQRankSum=4.688;DP=669;FS=0.797;HRun=0;HaplotypeScore=85.6584;InbreedingCoeff=0.6796;MQ=62.12;MQ0=20;MQRankSum=0.780;QD=12.91;ReadPosRankSum=3.714;VQSLOD=4.7089;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,17:27:32.93:374,33,0	0/1:2,6:8:5.57:129,0,6	./.	0/0:47,0:19:9.98:0,10,92	1/1:5,13:19:32.93:373,33,0	1/1:5,12:17:27.08:324,27,0	1/1:5,17:22:21.06:252,21,0	1/1:11,17:28:45.08:498,45,0	1/1:2,15:17:27.08:324,27,0	0/0:29,1:31:31.10:0,31,1043	0/0:17,2:19:15.19:0,15,697	1/1:7,9:16:17.41:215,17,0	1/1:4,12:16:26.91:302,27,0	0/0:19,1:20:16.42:0,16,682	0/1:26,4:30:2.71:3,0,874	0/0:23,1:24:30.26:0,30,954	1/1:10,26:37:60.02:697,60,0	0/1:10,13:24:1.10:225,0,1	0/1:15,3:17:68.82:69,0,398	0/1:24,2:26:8.74:9,0,801	0/0:27,0:26:51.58:0,52,751	1/1:1,7:9:15.05:180,15,0	1/1:5,11:16:18.05:216,18,0	1/1:7,17:25:36.41:411,36,0	0/0:27,1:28:24.07:0,24,792	0/0:22,2:24:6.52:0,7,890	0/0:32,3:34:51.37:0,51,1206	0/0:12,0:12:29.59:0,30,438
chr10	59022505	.	C	CTACA	946.34	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-6.391;DP=695;FS=3.738;HRun=0;HaplotypeScore=113.9270;InbreedingCoeff=0.9788;MQ=69.21;MQ0=1;MQRankSum=0.623;QD=43.02;ReadPosRankSum=1.659;VQSLOD=4.0137;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,99,1598	0/0:9,0:9:24.05:0,24,374	0/0:21,0:17:23.54:0,24,331	0/0:23,0:23:29.88:0,30,423	0/0:23,0:23:45.09:0,45,699	0/0:29,0:29:66.12:0,66,1073	0/0:30,0:30:78.25:0,78,1281	0/0:26,0:26:42.14:0,42,683	0/0:35,0:35:93.31:0,93,1537	0/0:29,0:29:69.21:0,69,1131	0/0:9,0:9:15.05:0,15,252	0/0:27,0:27:66.19:0,66,1056	0/0:23,0:23:63.22:0,63,1053	0/0:28,0:28:72.25:0,72,1209	0/0:29,0:29:78.22:0,78,1208	1/1:7,15:22:42.14:1041,42,0	0/0:29,0:29:78.22:0,78,1254	0/0:25,0:25:60.17:0,60,953	0/0:28,0:28:57.17:0,57,889	0/0:12,0:12:33.11:0,33,554	0/0:43,0:43:99:0,102,1686	0/0:23,0:23:48.16:0,48,794	0/0:11,0:11:30.10:0,30,504	0/0:22,0:22:57.19:0,57,949	0/0:17,0:17:39.13:0,39,648	0/0:38,0:38:99:0,102,1709	0/0:28,0:28:78.26:0,78,1269	0/0:14,0:14:36.12:0,36,597
chr10	59022714	.	T	TATC	7875.66	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=4.080;DP=864;FS=3.200;HRun=0;HaplotypeScore=134.3902;InbreedingCoeff=1.0000;MQ=82.59;MQ0=3;MQRankSum=-6.121;QD=59.22;ReadPosRankSum=1.630;VQSLOD=6.4821;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,40:44:99:2619,117,0	0/0:13,0:13:39.13:0,39,665	0/0:23,0:23:66.21:0,66,1051	0/0:27,0:27:75.23:0,75,1230	1/1:0,26:27:75.26:1714,75,0	0/0:20,0:20:42.14:0,42,716	0/0:28,0:28:81.28:0,81,1381	0/0:33,0:32:93.30:0,93,1555	1/1:5,35:41:99:2394,105,0	0/0:47,0:47:99:0,141,2398	0/0:27,0:27:78.25:0,78,1289	0/0:41,0:41:99:0,108,1837	0/0:29,0:28:78.25:0,78,1294	0/0:34,0:34:90.31:0,90,1534	0/0:51,0:51:99:0,129,2150	0/0:29,0:28:72.23:0,72,1200	0/0:34,0:33:84.29:0,84,1415	1/1:4,17:20:54.12:1149,54,0	0/0:28,0:28:81.26:0,81,1327	0/0:27,0:27:78.25:0,78,1299	0/0:47,0:47:99:0,129,2138	0/0:28,0:28:84.28:0,84,1394	0/0:31,0:31:84.27:0,84,1398	0/0:23,0:22:57.13:0,57,903	0/0:32,0:31:78.27:0,78,1324	0/0:34,0:34:96.33:0,96,1632	0/0:25,0:24:62.84:0,63,1063	0/0:20,0:20:57.16:0,57,919
chr10	59022757	.	A	AGT	10358.92	PASS	AB=0.729;AC=34;AF=0.607;AN=56;BaseQRankSum=-6.909;DP=946;FS=8.725;HRun=0;HaplotypeScore=152.1854;InbreedingCoeff=-0.4822;MQ=64.65;MQ0=25;MQRankSum=1.679;QD=11.59;ReadPosRankSum=0.992;VQSLOD=4.1798;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:36,9:45:72.19:243,0,72	1/1:7,1:14:0.34:49,0,0	0/0:52,0:15:2.04:0,2,6	0/1:46,0:17:0:0,0,0	1/1:15,8:22:14.70:172,15,0	0/1:10,17:27:30.90:426,0,31	1/1:13,11:24:21.07:322,21,0	1/1:37,0:37:17.68:120,18,0	0/1:27,8:35:41.21:261,0,41	1/1:15,20:35:25.59:692,26,0	0/1:11,8:20:22.02:125,0,22	0/1:26,12:40:99:458,0,112	0/1:14,16:29:22.97:552,0,23	1/1:15,23:39:17.20:697,17,0	0/1:19,24:45:24.42:634,0,24	0/1:18,18:36:99:502,0,110	0/1:40,1:40:11.24:275,0,11	0/1:11,6:16:12.48:249,0,12	0/1:26,7:31:76.18:267,0,76	0/1:14,8:23:41.53:255,0,42	1/1:49,24:73:73.11:1250,73,0	0/1:15,19:35:31.93:425,0,32	0/1:9,14:25:18.09:331,0,18	0/1:16,20:36:93.23:545,0,93	0/1:16,8:24:50.03:166,0,50	0/1:23,18:40:1.94:786,0,2	0/1:11,12:23:13.53:296,0,14	0/1:12,9:20:10.49:261,0,10
chr10	59022786	.	GTC	G	970.31	PASS	AB=0.899;AC=5;AF=0.089;AN=56;BaseQRankSum=1.933;DP=877;FS=4.631;HRun=0;HaplotypeScore=167.2867;InbreedingCoeff=-0.0695;MQ=53.58;MQ0=33;MQRankSum=-3.372;QD=5.95;ReadPosRankSum=-1.958;VQSLOD=2.8540;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:46:47.23:0,47,648	0/1:10,1:11:19.52:115,0,20	0/0:14,0:1:2.04:0,2,6	0/0:20,0:4:3.73:0,4,16	0/0:31,0:30:24.82:0,25,359	0/0:35,0:35:36.06:0,36,679	0/0:31,0:30:50.33:0,50,412	0/1:39,4:37:99:345,0,241	0/0:37,0:37:70.64:0,71,647	0/1:39,0:36:27.35:27,0,550	0/0:20,0:20:28.70:0,29,324	0/0:37,0:37:89.80:0,90,922	0/0:25,0:24:62.64:0,63,646	0/0:37,0:37:77.15:0,77,775	0/0:42,0:42:56.36:0,56,735	0/0:31,0:30:68.63:0,69,789	0/1:20,21:40:99:553,0,299	0/0:24,0:23:2.19:0,2,324	0/1:29,0:23:45.72:46,0,470	0/0:23,0:23:43.26:0,43,413	0/0:71,1:70:83.67:0,84,1168	0/0:35,0:34:59.14:0,59,638	0/0:21,0:20:23.19:0,23,279	0/0:35,0:35:80.57:0,81,851	0/0:17,0:16:26.72:0,27,323	0/0:40,0:37:54.93:0,55,824	0/0:19,0:19:22.23:0,22,430	0/0:20,0:17:39.35:0,39,342
chr10	59025242	.	TAC	T	1749.39	PASS	AB=0.914;AC=13;AF=0.232;AN=56;BaseQRankSum=10.146;DP=835;FS=0.000;HRun=0;HaplotypeScore=99.4074;InbreedingCoeff=0.2641;MQ=59.85;MQ0=12;MQRankSum=0.983;QD=6.94;ReadPosRankSum=-0.627;VQSLOD=2.9217;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:52,3:55:39.21:0,39,1505	1/1:1,9:9:21.06:252,21,0	0/0:42,0:20:15:0,15,211	0/0:53,0:22:18.06:0,18,279	0/0:21,0:21:45.11:0,45,671	0/0:20,0:20:48.13:0,48,741	0/1:33,3:36:14.67:15,0,1195	1/1:9,26:35:72.20:840,72,0	0/0:31,0:31:56.76:0,57,737	0/0:31,0:30:72.21:0,72,1104	0/0:21,1:22:12.18:0,12,681	0/0:32,0:32:68.02:0,68,1021	0/0:12,1:14:0.13:0,0,469	0/0:28,0:28:75.24:0,75,1167	0/1:24,2:26:14.78:15,0,726	0/0:17,1:18:9.15:0,9,611	1/1:2,29:31:63.02:733,63,0	0/1:24,3:27:5.29:5,0,841	0/0:22,0:22:36.10:0,36,640	0/1:23,2:25:17.72:18,0,714	0/0:81,8:87:0.69:0,1,2394	0/0:31,4:35:48.26:0,48,1227	0/1:20,2:21:14.77:15,0,730	0/0:27,0:27:72.25:0,72,1148	0/0:27,0:27:59.40:0,59,889	0/1:27,2:30:4.91:5,0,997	0/0:16,0:16:46.04:0,46,718	0/1:7,1:8:14.91:15,0,267
chr10	59025875	.	T	TG	3570.14	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-13.238;DP=673;FS=7.958;HRun=3;HaplotypeScore=63.5846;InbreedingCoeff=0.9992;MQ=85.28;MQ0=0;MQRankSum=-1.906;QD=34.66;ReadPosRankSum=2.933;VQSLOD=4.2212;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,33:40:93.31:1302,93,0	0/0:10,0:10:30.07:0,30,346	0/0:22,0:22:60.16:0,60,694	0/0:21,0:21:57.11:0,57,648	1/1:1,17:18:48.16:672,48,0	0/0:30,0:30:84.26:0,84,1006	0/0:31,0:31:90.24:0,90,1054	0/0:27,0:27:78.23:0,78,926	1/1:0,15:15:42.14:588,42,0	0/0:16,0:16:45.13:0,45,530	0/0:11,0:11:27.08:0,27,323	0/0:36,0:36:99:0,108,1284	0/0:22,0:22:60.17:0,60,707	0/0:33,0:33:90.27:0,90,1080	0/0:16,0:16:42.13:0,42,503	0/0:18,0:18:54.15:0,54,637	0/0:39,0:39:99:0,108,1280	1/1:4,26:30:72.24:1008,72,0	0/0:20,0:20:57.16:0,57,672	0/0:9,0:9:27.06:0,27,300	0/0:59,0:59:99:0,168,1988	0/0:21,0:21:54.16:0,54,647	0/0:14,0:14:42.12:0,42,493	0/0:27,0:27:78.24:0,78,936	0/0:21,0:21:60.18:0,60,719	0/0:21,0:21:60.18:0,60,720	0/0:31,0:31:90.28:0,90,1078	0/0:15,0:15:45.08:0,45,522
chr10	59033746	.	C	CG	58.73	PASS	AB=0.800;AC=13;AF=0.361;AN=36;BaseQRankSum=2.877;DP=78;FS=24.714;HRun=0;HaplotypeScore=27.1674;InbreedingCoeff=0.4556;MQ=89.75;MQ0=0;MQRankSum=-4.636;QD=3.67;ReadPosRankSum=-0.519;VQSLOD=0.9722;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:1,0:0:2.90:0,3,16	./.	0/0:3,0:3:5.12:0,5,21	0/0:4,0:4:8.99:0,9,76	./.	./.	0/0:6,0:6:18.06:0,18,251	1/1:1,0:1:2.97:20,3,0	./.	1/1:0,1:1:3.01:42,3,0	./.	./.	./.	./.	./.	1/1:0,2:2:4.04:12,4,0	0/1:6,2:8:1.34:1,0,142	0/0:14,0:14:42.09:0,42,548	./.	0/0:1,0:1:2.99:0,3,24	0/0:23,0:23:47.16:0,47,614	0/0:2,0:2:4.24:0,4,28	0/0:1,0:1:3:0,3,27	0/0:5,0:5:15.05:0,15,210	1/1:0,1:1:0.47:1,0,0	1/1:0,2:2:6.02:66,6,0	0/0:1,0:1:3:0,3,26	1/1:0,1:1:3.01:31,3,0
chr10	59035728	.	GGTGTGTGTGTGTGTGTGTGTGT	G	970.49	PASS	AB=0.774;AC=10;AF=0.179;AN=56;BaseQRankSum=2.737;DP=713;FS=0.000;HRun=0;HaplotypeScore=340.7160;InbreedingCoeff=0.5418;MQ=65.95;MQ0=15;MQRankSum=-3.073;QD=6.03;ReadPosRankSum=-0.582;VQSLOD=1.2694;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:30:15.05:0,15,280	0/0:12,0:18:20.96:0,21,423	0/0:31,0:21:15.05:0,15,304	0/0:36,0:29:21.17:0,21,398	0/0:13,0:25:12.04:0,12,221	1/1:9,8:18:6.02:176,6,0	1/1:32,0:32:3.01:94,3,0	0/0:34,0:32:34.67:0,35,712	0/0:14,0:22:6:0,6,83	0/0:25,0:35:53.20:0,53,1257	0/0:8,0:8:3.01:0,3,58	1/1:21,18:39:9.03:371,9,0	1/1:11,14:26:8.61:371,9,0	0/0:16,0:19:27.07:0,27,475	0/0:14,0:20:27.07:0,27,541	0/0:15,0:17:20.43:0,20,452	0/0:20,0:26:10.88:0,11,369	0/1:21,0:27:93.74:94,0,568	0/0:19,0:18:3.01:0,3,40	0/0:9,0:9:3.01:0,3,72	0/0:74,0:74:78.25:0,78,1825	0/1:12,7:18:0:0,0,0	0/0:7,10:17:0:0,0,0	0/0:21,14:35:0:0,0,1	0/0:8,0:14:9.03:0,9,198	0/0:21,0:28:59.87:0,60,1654	0/0:8,0:20:14.68:0,15,318	0/0:9,0:8:6.02:0,6,124
chr10	59035765	.	G	GTACA	147.25	PASS	AB=0.926;AC=3;AF=0.054;AN=56;BaseQRankSum=7.155;DP=751;FS=51.477;HRun=0;HaplotypeScore=175.1070;InbreedingCoeff=0.4261;MQ=45.95;MQ0=42;MQRankSum=-4.684;QD=3.78;ReadPosRankSum=3.445;VQSLOD=1.3451;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:33:48.66:0,49,991	1/1:12,2:13:10.18:119,10,0	0/0:24,0:6:16.87:0,17,266	0/0:36,0:10:21.03:0,21,318	0/0:25,0:25:24.07:0,24,471	0/0:21,0:20:13.99:0,14,359	0/0:24,0:19:7.11:0,7,439	0/0:35,0:30:3.95:0,4,921	0/0:19,0:19:26.54:0,27,502	0/0:32,0:31:12.16:0,12,1108	0/0:23,0:23:52.42:0,52,1002	0/0:36,0:34:14.70:0,15,627	0/0:26,0:25:29.23:0,29,476	0/0:27,0:25:22.71:0,23,742	0/0:24,0:24:20.31:0,20,768	0/0:19,0:18:42.14:0,42,800	0/1:23,2:25:77.78:126,0,78	0/0:24,0:23:39.25:0,39,575	0/0:13,0:9:23.36:0,23,421	0/0:18,0:17:24.03:0,24,525	0/0:87,0:85:99:0,121,2062	0/0:27,0:23:38.96:0,39,717	0/0:22,0:21:18.04:0,18,303	0/0:34,0:31:8.89:0,9,177	0/0:18,0:18:23.88:0,24,452	0/0:32,0:27:54.96:0,55,1073	0/0:22,0:20:8.65:0,9,348	0/0:8,0:5:9.03:0,9,177
chr10	59037998	.	TTGTGTGTGTGTGTGTGTG	T	5085.54	PASS	AB=0.568;AC=13;AF=0.232;AN=56;BaseQRankSum=8.433;DP=631;FS=26.573;HRun=0;HaplotypeScore=263.4501;InbreedingCoeff=0.8445;MQ=68.37;MQ0=9;MQRankSum=-7.953;QD=32.39;ReadPosRankSum=1.948;VQSLOD=2.6658;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:41:45.12:0,45,1837	0/0:7,0:7:15.05:0,15,1211	0/0:29,0:17:9.03:0,9,155	0/0:25,0:20:9.92:0,10,219	0/0:20,0:18:27.09:0,27,1620	1/1:8,9:17:15.05:732,15,0	1/1:12,17:29:15.05:732,15,0	0/0:22,0:22:36.11:0,36,1511	0/0:18,0:18:24.08:0,24,854	0/0:31,0:29:58.38:0,58,3143	0/0:15,0:15:24.08:0,24,1394	0/1:6,17:25:5.45:1389,0,5	1/1:11,10:22:18.06:781,18,0	0/0:17,0:17:26.76:0,27,1800	0/0:22,0:22:18.06:0,18,1057	0/0:10,0:10:18.06:0,18,895	0/0:34,0:38:81.28:0,81,5321	0/0:23,0:23:53.21:0,53,3425	0/0:21,0:21:33.10:0,33,1460	0/0:20,0:20:21.06:0,21,1098	0/0:33,0:33:36.12:0,36,1583	1/1:6,13:19:12.04:518,12,0	1/1:7,8:16:18.06:788,18,0	1/1:18,10:29:3.01:147,3,0	0/0:20,0:21:24.94:0,25,1080	0/0:25,0:25:54.19:0,54,2748	0/0:19,0:19:33.11:0,33,1620	0/0:15,0:15:24.08:0,24,968
chr10	59038039	.	T	TTGTGC	695.38	PASS	AB=0.610;AC=12;AF=0.214;AN=56;BaseQRankSum=3.405;DP=606;FS=1.431;HRun=0;HaplotypeScore=147.8858;InbreedingCoeff=-0.1178;MQ=63.85;MQ0=8;MQRankSum=0.532;QD=2.87;ReadPosRankSum=3.872;VQSLOD=2.3992;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:52:12.52:0,13,171	0/0:9,0:9:24.05:0,24,471	0/0:18,0:15:33.26:0,33,715	0/0:16,0:9:21.93:0,22,292	0/0:20,0:19:0.57:0,1,160	0/0:16,0:16:30.08:0,30,469	0/0:34,0:34:42.11:0,42,643	0/0:18,0:18:46.31:0,46,702	0/0:3,0:11:2.07:0,2,37	0/1:11,0:26:99:124,0,264	0/1:7,0:16:65.41:73,0,65	0/0:28,0:28:54.14:0,54,845	0/0:18,0:18:33.11:0,33,536	0/1:3,0:19:41.26:163,0,41	0/1:5,0:25:51.89:76,0,52	0/0:3,0:10:1.19:0,1,23	0/0:31,0:31:87.21:0,87,1670	0/1:3,0:23:4.54:5,0,66	0/1:16,0:15:2.88:3,0,172	0/0:5,0:20:7.24:0,7,57	0/1:7,0:28:28.03:28,0,86	0/0:20,0:20:24.92:0,25,370	0/0:14,0:14:23.99:0,24,311	0/0:25,0:25:12.98:0,13,218	1/1:4,0:19:8.62:120,9,0	0/1:5,0:33:76.47:76,0,365	0/1:4,1:22:82.18:82,0,100	0/1:2,0:14:20.26:89,0,20
chr10	59038903	.	A	AACAC	2923.19	PASS	AB=0.855;AC=40;AF=0.769;AN=52;BaseQRankSum=-2.970;DP=541;FS=30.497;HRun=0;HaplotypeScore=117.9034;InbreedingCoeff=-0.1863;MQ=62.69;MQ0=9;MQRankSum=0.172;QD=5.97;ReadPosRankSum=1.498;VQSLOD=1.0124;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:29:43.34:234,0,43	0/0:8,0:8:9.02:0,9,95	./.	./.	0/1:9,0:12:19.07:25,0,19	0/1:9,8:20:58.21:58,0,72	1/1:15,1:22:8.99:111,9,0	1/1:12,0:12:6.83:43,7,0	1/1:5,0:13:7.79:51,8,0	1/1:26,0:25:5.14:48,5,0	0/1:12,0:12:34.36:85,0,34	1/1:23,4:30:15.05:332,15,0	0/1:9,7:18:23.69:152,0,24	1/1:17,0:16:15.02:193,15,0	1/1:10,5:22:8.50:95,8,0	0/1:10,0:10:17.35:17,0,30	0/1:24,0:23:68.96:69,0,107	0/1:26,0:25:31.27:153,0,31	1/1:10,0:14:8.76:99,9,0	1/1:5,7:13:3.01:70,3,0	1/1:27,11:50:11.69:170,12,0	1/1:14,0:11:9.02:130,9,0	0/1:8,4:12:23.92:64,0,24	0/1:23,7:31:21.52:198,0,22	1/1:9,4:14:3.01:70,3,0	1/1:20,0:21:29.25:336,29,0	1/1:17,0:17:17.97:196,18,0	1/1:3,0:8:5.98:72,6,0
chr10	59039633	.	CAAA	C	2535.93	PASS	AB=0.647;AC=27;AF=0.482;AN=56;BaseQRankSum=6.494;DP=546;FS=3.332;HRun=19;HaplotypeScore=102.5529;InbreedingCoeff=0.7331;MQ=59.86;MQ0=7;MQRankSum=2.849;QD=9.09;ReadPosRankSum=6.323;VQSLOD=-0.5304;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:33:5.83:90,6,0	1/1:2,4:7:17.64:147,18,0	0/0:32,0:11:6.49:0,6,92	0/0:23,0:8:3.40:0,3,69	0/1:9,2:15:15.53:41,0,16	1/1:5,10:15:22.74:200,23,0	1/1:4,17:21:32.12:290,32,0	1/1:7,13:20:35.63:320,36,0	0/1:11,0:22:23.29:23,0,26	0/0:18,0:21:38.56:0,39,485	0/0:13,0:15:24.05:0,24,306	1/1:6,6:13:14.24:137,14,0	1/1:6,9:16:29.37:278,29,0	0/0:10,0:24:33.30:0,33,402	0/0:18,0:20:35.44:0,35,426	0/1:3,0:14:5.54:37,0,6	1/1:2,15:18:28.34:277,28,0	1/1:10,1:23:6.43:97,6,0	0/0:20,0:21:28.25:0,28,315	0/0:12,0:14:31.82:0,32,369	0/0:16,0:18:19.23:0,19,229	1/1:2,17:23:24.71:324,25,0	1/1:5,10:15:24.98:226,25,0	1/1:6,13:23:31.88:263,32,0	0/0:7,0:12:21.02:0,21,276	0/0:18,0:20:30.22:0,30,280	0/0:25,1:27:30.62:0,31,656	0/0:14,0:17:29.54:0,30,382
chr10	59040638	.	GCA	G	4127.66	PASS	AB=0.923;AC=11;AF=0.196;AN=56;BaseQRankSum=10.621;DP=681;FS=0.000;HRun=0;HaplotypeScore=112.5611;InbreedingCoeff=0.9097;MQ=68.23;MQ0=1;MQRankSum=-3.524;QD=27.70;ReadPosRankSum=3.575;VQSLOD=4.6773;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,45:53:99:1567,124,0	0/0:7,0:7:18.04:0,18,254	0/0:24,0:23:28.55:0,29,574	0/0:33,0:33:61.63:0,62,1123	1/1:2,18:20:51.16:649,51,0	0/0:19,0:19:42.14:0,42,699	0/0:32,0:32:84.29:0,84,1396	0/0:25,0:25:69.23:0,69,1126	1/1:3,17:20:48.15:611,48,0	0/0:16,0:16:45.15:0,45,753	0/0:18,0:18:48.15:0,48,778	0/0:24,0:24:57.19:0,57,947	0/0:14,0:14:42.14:0,42,695	0/0:23,0:23:60.21:0,60,1002	0/0:24,0:24:66.23:0,66,1101	1/1:2,15:16:38.92:496,39,0	0/0:35,1:36:93.32:0,93,1539	1/1:3,24:27:28.79:800,29,0	0/0:23,1:24:25.01:0,25,955	0/0:19,0:19:51.17:0,51,850	0/0:48,1:49:94.27:0,94,2113	0/0:22,0:22:48.16:0,48,802	0/1:11,1:11:5.10:5,0,440	0/0:37,0:37:99:0,102,1694	0/0:18,0:18:42.14:0,42,703	0/0:24,0:24:66.23:0,66,1105	0/0:23,0:23:60.21:0,60,999	0/0:21,0:21:54.17:0,54,846
chr10	59043513	.	TCACA	T	865.18	PASS	AB=1.000;AC=22;AF=0.423;AN=52;BaseQRankSum=-3.112;DP=587;FS=0.000;HRun=0;HaplotypeScore=117.6301;InbreedingCoeff=0.6819;MQ=72.33;MQ0=7;MQRankSum=0.308;QD=4.01;ReadPosRankSum=0.114;VQSLOD=1.6489;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:21.07:0,21,358	0/0:10,0:10:9.01:0,9,126	./.	0/1:33,0:23:0:0,0,0	0/0:23,0:23:21.58:0,22,427	0/0:8,0:8:3.01:0,3,49	0/0:27,0:26:6.02:0,6,98	0/0:27,0:27:8.99:0,9,101	0/1:17,0:17:2.90:3,0,258	1/1:13,5:18:14.95:136,15,0	1/1:10,1:12:6.40:46,6,0	0/0:19,0:19:15.04:0,15,214	0/0:16,0:16:18.04:0,18,250	1/1:15,2:16:6.49:93,6,0	1/1:6,6:14:14.99:168,15,0	0/0:21,0:21:18.24:0,18,334	0/0:36,0:36:21.07:0,21,362	0/0:20,0:20:19.38:0,19,283	1/1:16,1:18:6.01:74,6,0	1/1:17,3:21:12.03:158,12,0	1/1:24,0:24:6.02:89,6,0	0/0:27,0:27:8.54:0,9,109	0/0:23,0:22:3.01:0,3,52	0/0:25,0:25:6.70:0,7,126	1/1:14,2:16:6.02:92,6,0	./.	1/1:9,3:12:9.03:138,9,0	1/1:11,3:13:3.01:46,3,0
chr10	59043552	.	C	CAT	2824.51	PASS	AB=0.923;AC=19;AF=0.339;AN=56;BaseQRankSum=6.885;DP=666;FS=24.950;HRun=0;HaplotypeScore=120.9545;InbreedingCoeff=0.0807;MQ=55.37;MQ0=15;MQRankSum=2.328;QD=7.78;ReadPosRankSum=4.096;VQSLOD=1.4648;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:47,0:47:22.92:474,0,23	1/1:1,8:10:1.45:92,1,0	0/0:23,0:9:16.96:0,17,153	0/0:27,0:13:23.89:0,24,214	0/1:25,0:24:79.52:126,0,80	1/1:17,0:17:2.98:22,3,0	0/1:11,17:28:33.45:33,0,83	1/1:32,0:31:76.97:608,77,0	0/1:18,0:18:89.98:90,0,154	0/0:29,0:29:83.76:0,84,704	0/0:15,0:15:29.78:0,30,224	0/1:17,0:15:23.18:129,0,23	0/1:23,0:22:67.58:186,0,68	0/0:24,0:23:53.83:0,54,423	0/0:21,0:21:44.11:0,44,349	0/1:16,0:16:13.15:144,0,13	0/1:4,36:41:4.15:305,0,4	0/1:22,0:22:21.07:248,0,21	0/0:26,0:24:71.72:0,72,589	0/0:16,0:16:35.34:0,35,277	0/0:43,0:42:68.56:0,69,553	0/1:17,0:17:61.09:61,0,87	1/1:26,0:25:31.67:258,32,0	0/1:24,0:24:20.12:222,0,20	0/0:20,0:19:47.91:0,48,390	0/0:20,0:20:55.80:0,56,442	0/0:18,0:18:47.32:0,47,331	0/0:21,0:20:47.50:0,48,351
chr10	59043563	.	A	ATACACACACACC	7282.91	PASS	AB=0.945;AC=22;AF=0.393;AN=56;BaseQRankSum=-4.519;DP=603;FS=2.046;HRun=0;HaplotypeScore=209.5984;InbreedingCoeff=0.4044;MQ=67.94;MQ0=12;MQRankSum=-0.542;QD=22.27;ReadPosRankSum=0.647;VQSLOD=4.2201;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:38,0:38:99:1152,0,153	0/1:11,0:11:48.18:48,0,68	0/0:29,0:17:39.94:0,40,426	0/0:30,0:18:38.65:0,39,511	0/1:23,0:22:99:336,0,437	0/1:4,9:18:0.54:184,0,1	1/1:23,0:23:11.96:174,12,0	1/1:30,0:29:86.98:1167,87,0	0/1:16,0:16:99:298,0,223	0/0:25,0:25:59.59:0,60,996	0/0:14,0:14:28.30:0,28,391	1/1:11,0:10:21.90:386,22,0	1/1:20,0:20:59.42:817,59,0	0/0:16,0:15:36.10:0,36,623	0/0:22,0:22:45.93:0,46,824	0/1:18,0:18:99:403,0,234	0/1:35,0:35:66.54:168,0,67	0/1:22,0:22:99:626,0,186	0/0:25,0:24:69.68:0,70,1090	0/0:13,0:13:34.50:0,35,489	0/0:38,0:37:71.50:0,71,980	1/1:14,0:14:2.77:219,3,0	1/1:25,0:24:41.29:640,41,0	1/1:21,0:21:19.15:665,19,0	0/0:19,0:18:42.13:0,42,737	0/0:16,0:16:48.16:0,48,760	0/0:16,0:16:45.59:0,46,751	0/0:13,0:13:23.89:0,24,405
chr10	59046247	.	GTTGTTTGTTTGT	G	14553.20	PASS	AB=0.637;AC=27;AF=0.482;AN=56;BaseQRankSum=13.900;DP=731;FS=3.862;HRun=0;HaplotypeScore=250.0383;InbreedingCoeff=0.7875;MQ=65.46;MQ0=2;MQRankSum=-13.511;QD=38.71;ReadPosRankSum=-0.288;VQSLOD=4.4089;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:20,15:35:36.75:1214,37,0	1/1:3,3:6:9.03:314,9,0	0/0:28,0:23:17.99:0,18,682	0/0:23,0:21:15.05:0,15,356	1/1:14,20:34:54.10:1497,54,0	1/1:14,16:30:27.09:940,27,0	1/1:8,9:17:13.62:485,14,0	1/1:27,10:35:30.06:433,30,0	0/1:2,16:18:7.44:1012,0,7	0/0:32,0:32:69.24:0,69,3948	0/0:19,0:19:42.14:0,42,2424	1/1:8,18:26:42.14:1463,42,0	1/1:15,13:28:24.08:836,24,0	0/0:28,0:28:66.22:0,66,3336	0/0:39,0:39:90.29:0,90,4773	1/1:14,14:28:39.13:1358,39,0	1/1:9,13:22:30.10:1045,30,0	0/1:12,10:22:25.88:469,0,26	0/0:18,0:17:9.03:0,9,391	0/0:36,0:36:90.31:0,90,4714	0/0:26,0:26:60.19:0,60,3064	1/1:7,18:25:57.09:1782,57,0	1/1:9,13:22:36.08:1100,36,0	0/1:14,11:24:6.09:606,0,6	0/0:19,0:31:75.26:0,75,3845	0/0:30,0:30:75.26:0,75,4030	0/0:36,0:35:81.25:0,81,4217	0/0:7,0:8:21.07:0,21,1081
chr10	59046460	.	CT	C	3595.75	PASS	AB=0.777;AC=33;AF=0.589;AN=56;BaseQRankSum=-0.119;DP=653;FS=0.759;HRun=15;HaplotypeScore=93.3648;InbreedingCoeff=0.3558;MQ=61.26;MQ0=2;MQRankSum=1.951;QD=7.40;ReadPosRankSum=3.047;VQSLOD=3.0732;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,33:48:66.83:505,67,0	0/1:7,2:9:17.55:18,0,108	0/1:17,2:12:6.29:6,0,53	0/1:17,1:13:14.15:14,0,33	0/1:10,13:25:7.87:195,0,8	0/0:26,1:27:20.12:0,20,398	0/0:13,0:14:20.83:0,21,169	0/0:28,1:30:5.99:0,6,382	0/1:4,11:16:31.47:141,0,31	1/1:10,15:25:35.23:228,35,0	1/1:7,12:20:8:171,8,0	0/1:16,2:19:3.33:3,0,237	0/0:20,1:22:29.05:0,29,351	1/1:8,9:18:15.14:158,15,0	1/1:15,18:34:11.16:317,11,0	1/1:10,14:24:14.30:203,14,0	0/0:30,2:32:20.44:0,20,453	0/1:16,7:26:62.61:63,0,243	1/1:14,6:23:11.39:167,11,0	0/1:14,15:29:6.41:221,0,6	1/1:4,12:17:29.64:194,30,0	0/0:20,0:20:11.25:0,11,219	0/1:18,1:23:0.26:0,0,156	0/0:20,2:22:18.37:0,18,396	1/1:3,14:17:8.97:184,9,0	1/1:10,20:31:63.28:408,63,0	1/1:17,13:30:41.02:267,41,0	1/1:4,8:13:0.51:130,1,0
chr10	59049734	.	A	AT	4926.56	PASS	AB=0.744;AC=29;AF=0.518;AN=56;BaseQRankSum=2.473;DP=348;FS=24.746;HRun=9;HaplotypeScore=100.4777;InbreedingCoeff=0.7419;MQ=66.24;MQ0=0;MQRankSum=-4.318;QD=21.61;ReadPosRankSum=-2.931;VQSLOD=2.9377;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,16:22:22.93:461,23,0	1/1:2,7:9:21.06:232,21,0	0/1:8,0:5:17.14:17,0,53	0/0:7,0:7:5.98:0,6,52	1/1:1,14:15:32.97:325,33,0	1/1:3,12:15:33.09:365,33,0	1/1:2,7:9:17.72:199,18,0	1/1:4,24:28:72.14:762,72,0	0/1:6,6:12:5:178,0,5	0/0:10,0:11:7.13:0,7,168	0/0:7,0:7:11.96:0,12,98	1/1:7,12:18:29.87:325,30,0	1/1:3,11:14:31.63:336,32,0	0/0:17,0:17:20.98:0,21,182	0/0:11,0:11:20.96:0,21,179	0/1:6,6:12:10.59:176,0,11	1/1:4,18:22:22.09:471,22,0	1/1:4,15:20:47.94:500,48,0	0/0:5,0:5:15:0,15,130	0/0:9,0:9:18:0,18,156	0/0:4,0:4:2.98:0,3,26	1/1:0,8:8:24.06:265,24,0	1/1:1,8:9:15.04:166,15,0	1/1:0,5:5:14.96:149,15,0	0/0:13,1:14:29.81:0,30,260	0/0:7,0:7:21:0,21,182	0/0:12,0:12:29.58:0,30,244	0/0:16,0:16:41.99:0,42,365
chr10	59049764	.	GTATA	G	1051.11	PASS	AB=0.882;AC=21;AF=0.477;AN=44;BaseQRankSum=3.285;DP=219;FS=1.075;HRun=0;HaplotypeScore=109.3597;InbreedingCoeff=0.5415;MQ=48.36;MQ0=2;MQRankSum=-5.992;QD=7.56;ReadPosRankSum=-0.815;VQSLOD=2.5207;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,3:11:3.01:30,3,0	1/1:3,4:7:6.02:96,6,0	0/0:9,0:1:0.47:0,0,1	./.	0/1:13,2:15:0:0,0,0	1/1:8,1:13:5.99:50,6,0	1/1:6,0:6:1.25:3,1,0	1/1:30,3:24:20.06:290,20,0	1/1:6,0:6:3:29,3,0	0/0:4,0:4:3.01:0,3,47	0/0:3,0:3:3.01:0,3,45	0/0:6,0:7:2.74:0,3,12	1/1:5,0:7:3:25,3,0	0/0:6,0:6:6.02:0,6,84	0/0:3,0:3:4.83:0,5,63	1/1:8,0:8:15.03:151,15,0	1/1:13,5:18:23.82:273,24,0	1/1:12,3:15:18.05:244,18,0	0/0:7,0:5:0.94:0,1,5	./.	./.	./.	./.	./.	0/0:10,0:10:12.08:0,12,136	0/0:4,0:4:3.01:0,3,54	0/0:4,0:4:3.01:0,3,56	0/0:7,0:7:15.05:0,15,300
chr10	59049769	.	TATATATATATATATATATAC	T	3113.38	PASS	AB=1.000;AC=21;AF=0.457;AN=46;BaseQRankSum=3.050;DP=201;FS=3.580;HRun=0;HaplotypeScore=141.5736;InbreedingCoeff=0.5136;MQ=47.38;MQ0=2;MQRankSum=-6.008;QD=25.73;ReadPosRankSum=-0.446;VQSLOD=2.6783;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:9,2:11:3.01:163,3,0	1/1:6,0:6:6.02:240,6,0	0/0:8,0:1:0.47:0,0,1	./.	0/0:13,3:16:0.47:0,0,1	1/1:14,0:14:9.03:333,9,0	1/1:6,0:6:1.25:3,1,0	1/1:28,0:19:17.75:204,18,0	1/1:5,1:6:3.01:162,3,0	0/0:3,0:3:3.01:0,3,224	0/0:3,0:3:6.02:0,6,229	0/0:7,0:7:2.74:0,3,12	1/1:5,0:5:3.01:147,3,0	0/0:5,0:5:6.02:0,6,285	0/0:4,0:4:9.03:0,9,374	1/1:3,5:8:15.05:813,15,0	1/1:17,0:17:23.98:607,24,0	1/1:14,0:14:21.07:537,21,0	0/1:6,0:4:46.04:52,0,46	./.	./.	./.	0/0:3,0:3:0:0,0,0	./.	0/0:9,0:9:14.06:0,14,560	0/0:3,0:3:3.01:0,3,54	0/0:3,0:3:3.01:0,3,219	0/0:7,0:7:18.04:0,18,1111
chr10	59049787	.	TAC	T	878.24	PASS	AB=1.000;AC=37;AF=0.804;AN=46;BaseQRankSum=0.051;DP=151;FS=4.619;HRun=0;HaplotypeScore=80.2953;InbreedingCoeff=-0.0168;MQ=47.77;MQ0=2;MQRankSum=-2.421;QD=6.32;ReadPosRankSum=-2.955;VQSLOD=1.8686;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:11:5.87:39,6,0	1/1:5,0:5:5.81:33,6,0	1/1:5,0:2:2.68:11,3,0	./.	1/1:12,0:12:2.99:24,3,0	1/1:6,1:7:8.73:50,9,0	1/1:4,0:4:2.94:18,3,0	1/1:18,1:11:26.21:172,26,0	1/1:3,0:3:2.92:17,3,0	1/1:5,0:5:10.32:59,10,0	1/1:2,0:2:5.49:25,5,0	./.	1/1:3,2:5:2.88:15,3,0	0/1:4,0:4:0.17:20,0,0	0/1:3,0:3:1.53:24,0,2	1/1:5,0:5:14.38:76,14,0	1/1:12,1:13:17.55:103,18,0	1/1:11,0:11:23.17:156,23,0	0/1:2,0:2:11.77:13,0,12	./.	1/1:1,0:1:2.90:16,3,0	./.	0/0:1,1:2:0:0,0,0	./.	0/1:9,0:9:1.71:67,0,2	0/1:4,0:4:15.42:35,0,15	0/1:3,0:3:2.48:7,0,2	0/1:6,0:6:1.61:2,0,52
chr10	59049791	.	TATATATATATATAC	T	2150.58	PASS	AB=0.958;AC=16;AF=0.348;AN=46;BaseQRankSum=2.748;DP=189;FS=0.000;HRun=0;HaplotypeScore=118.2658;InbreedingCoeff=0.3842;MQ=45.98;MQ0=1;MQRankSum=-5.630;QD=19.73;ReadPosRankSum=2.236;VQSLOD=2.1864;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:14,0:14:42.87:70,0,43	1/1:4,2:6:6.02:240,6,0	0/0:5,0:2:3.01:0,3,40	./.	0/0:16,0:16:2.11:0,2,14	1/1:4,5:9:9.03:293,9,0	./.	1/1:24,0:16:26.83:426,27,0	1/1:8,0:8:3.90:79,4,0	0/0:5,0:6:10.84:0,11,237	0/0:2,0:2:5.85:0,6,139	0/1:4,1:5:0:0,0,0	1/1:4,2:6:3.01:119,3,0	0/0:4,0:4:12.01:0,12,299	0/0:4,0:4:9.03:0,9,339	0/1:8,0:8:31.28:372,0,31	1/1:13,4:17:16.17:550,16,0	0/1:12,0:12:59.24:147,0,59	0/0:2,0:2:3.01:0,3,38	./.	0/0:2,0:2:2.98:0,3,21	./.	0/0:2,1:3:0:0,0,0	./.	0/0:9,0:9:12.01:0,12,408	0/0:5,0:5:14.85:0,15,132	0/0:3,0:3:6.02:0,6,280	0/0:6,0:6:15.05:0,15,769
chr10	59049805	.	C	CAT	1230.23	PASS	AB=0.750;AC=19;AF=0.339;AN=56;BaseQRankSum=-2.902;DP=243;FS=15.271;HRun=0;HaplotypeScore=93.9345;InbreedingCoeff=0.6925;MQ=57.67;MQ0=1;MQRankSum=-3.375;QD=12.55;ReadPosRankSum=0.039;VQSLOD=2.1424;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:29.56:0,30,327	1/1:5,1:6:4.44:15,4,0	0/0:11,0:8:14.61:0,15,137	0/0:7,0:3:3.27:0,3,14	0/0:15,0:15:5.70:0,6,63	1/1:8,2:10:10.08:73,10,0	0/1:0,8:8:0:0,0,0	1/1:15,5:16:45.15:727,45,0	0/0:12,0:12:20.15:0,20,229	0/0:9,0:9:23.91:0,24,234	0/0:7,0:7:15.05:0,15,188	1/1:6,3:9:15.04:211,15,0	1/1:4,6:10:2.01:6,2,0	0/0:6,0:6:18.04:0,18,203	0/0:7,0:7:21.05:0,21,248	0/0:10,0:10:27.07:0,27,299	1/1:16,2:18:16.40:138,16,0	0/0:13,0:13:20.95:0,21,219	0/0:4,0:3:9.03:0,9,111	0/0:2,0:2:3.01:0,3,38	0/0:3,0:3:6.02:0,6,74	1/1:2,0:2:3:25,3,0	0/1:2,1:3:0.02:0,0,0	1/1:6,0:6:15.01:205,15,0	0/0:7,0:7:18.04:0,18,208	0/0:9,0:9:27.09:0,27,337	0/0:4,0:4:6:0,6,61	0/1:6,0:6:0.95:1,0,101
chr10	59051830	.	CTT	C	1418.51	PASS	AB=0.670;AC=18;AF=0.321;AN=56;BaseQRankSum=-2.934;DP=519;FS=5.249;HRun=16;HaplotypeScore=81.8130;InbreedingCoeff=0.6463;MQ=65.78;MQ0=8;MQRankSum=2.254;QD=7.55;ReadPosRankSum=3.958;VQSLOD=0.8081;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:9,1:18:2.01:2,0,96	0/1:5,1:9:9.16:9,0,44	0/0:13,0:8:5.37:0,5,35	0/0:8,0:7:8.62:0,9,52	0/0:12,1:19:6.59:0,7,159	1/1:13,13:26:55.81:426,56,0	1/1:4,10:15:11.85:142,12,0	0/0:13,0:16:21.65:0,22,83	0/1:6,1:12:7.22:7,0,64	0/0:17,0:17:20.98:0,21,222	0/0:20,0:22:36.45:0,36,370	1/1:13,3:19:11.03:102,11,0	1/1:4,10:14:8:157,8,0	0/0:13,0:13:29.88:0,30,285	0/0:16,0:18:40.32:0,40,400	0/0:7,0:19:29.73:0,30,158	0/0:14,1:26:27.95:0,28,216	0/1:9,3:18:40:40,0,114	0/0:20,0:25:46.83:0,47,433	0/0:13,0:13:29.22:0,29,257	0/0:8,0:11:15.28:0,15,134	1/1:6,13:20:11.27:221,11,0	1/1:10,9:19:24.81:278,25,0	1/1:7,5:12:26.96:224,27,0	0/0:17,0:17:43.18:0,43,488	0/0:20,0:22:46.07:0,46,432	0/0:36,0:36:63.03:0,63,551	0/0:30,0:31:51.88:0,52,557
chr10	59052004	.	T	TGC	16653.69	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-8.052;DP=603;FS=0.000;HRun=0;HaplotypeScore=71.9858;InbreedingCoeff=0.9996;MQ=74.22;MQ0=2;MQRankSum=-2.197;QD=46.65;ReadPosRankSum=2.092;VQSLOD=6.1281;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,38:36:96.33:1792,96,0	1/1:1,12:14:36.12:673,36,0	0/0:15,0:15:40.02:0,40,575	0/0:19,0:19:51.13:0,51,718	1/1:2,14:16:39.13:724,39,0	1/1:1,27:28:75.26:1403,75,0	1/1:1,27:28:75.26:1402,75,0	1/1:4,28:32:84.27:1430,84,0	1/1:0,20:20:45.15:841,45,0	0/0:18,0:18:45.15:0,45,662	0/0:13,0:13:39.13:0,39,573	1/1:1,26:29:78.27:1451,78,0	1/1:3,20:23:51.17:952,51,0	0/0:26,0:26:72.24:0,72,1059	0/0:27,0:27:81.26:0,81,1173	1/1:0,17:17:51.17:951,51,0	1/1:1,20:21:54.19:1010,54,0	1/1:1,28:30:75.26:1390,75,0	0/0:17,0:17:45.11:0,45,591	0/0:12,0:12:30.07:0,30,418	0/0:36,0:36:99:0,102,1480	1/1:0,11:11:27.09:505,27,0	1/1:1,14:15:33.11:614,33,0	1/1:1,33:34:81.28:1515,81,0	0/0:13,0:12:39.13:0,39,574	0/0:21,0:21:60.20:0,60,883	0/0:19,0:18:54.18:0,54,792	0/0:10,0:10:30.07:0,30,402
chr10	59053994	.	A	AACAC	1690.82	PASS	AB=0.822;AC=44;AF=0.846;AN=52;BaseQRankSum=2.114;DP=519;FS=0.000;HRun=0;HaplotypeScore=139.0131;InbreedingCoeff=-0.0976;MQ=63.05;MQ0=7;MQRankSum=-0.456;QD=3.56;ReadPosRankSum=-3.307;VQSLOD=1.5448;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:25:6.65:7,0,83	1/1:5,0:10:2.60:12,3,0	./.	./.	1/1:8,0:12:2.68:12,3,0	0/1:16,0:26:6.44:6,0,40	0/1:14,0:17:23.41:23,0,37	1/1:20,0:20:1.82:5,2,0	1/1:20,0:20:2.91:24,3,0	1/1:17,0:16:11.78:154,12,0	1/1:21,0:21:11.95:166,12,0	0/1:11,0:11:0.01:0,0,0	1/1:12,0:12:0.88:2,1,0	1/1:19,0:22:3.01:50,3,0	1/1:17,0:17:3.01:48,3,0	1/1:9,5:18:8.77:147,9,0	0/1:13,0:19:19.13:31,0,19	0/1:17,0:22:39.56:42,0,40	1/1:16,0:16:9.91:133,10,0	1/1:7,0:7:3.01:68,3,0	1/1:16,0:18:3.01:49,3,0	1/1:7,0:14:5.49:24,5,0	0/1:11,0:16:25.77:49,0,26	0/1:21,0:35:37.96:38,0,93	1/1:14,0:18:12.04:219,12,0	1/1:21,0:23:15.03:226,15,0	1/1:27,0:27:16.39:223,16,0	1/1:7,0:7:6.07:55,6,0
chr10	59054136	.	TTTTTTTTG	T	6508.34	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=8.347;DP=610;FS=0.851;HRun=0;HaplotypeScore=176.2066;InbreedingCoeff=0.4540;MQ=62.14;MQ0=0;MQRankSum=-9.670;QD=20.99;ReadPosRankSum=-0.950;VQSLOD=4.1617;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:22:99:234,0,158	0/1:9,0:9:33.96:222,0,34	0/0:22,0:17:30.08:0,30,404	0/0:14,0:12:19.88:0,20,436	0/1:34,0:34:99:420,0,380	1/1:12,16:28:24.08:609,24,0	1/1:3,18:21:30.03:707,30,0	0/0:26,0:26:50.81:0,51,418	0/1:26,0:26:99:560,0,142	0/0:27,0:27:75.16:0,75,1650	0/0:19,0:19:48.06:0,48,874	1/1:2,20:22:26.99:628,27,0	1/1:1,16:17:24.08:613,24,0	0/0:26,0:26:62.99:0,63,1456	0/0:19,0:19:42.08:0,42,865	0/1:21,0:21:99:558,0,143	0/1:27,0:26:99:281,0,254	0/1:16,0:16:99:130,0,158	0/0:23,0:23:45:0,45,788	0/0:23,0:23:60.07:0,60,1500	0/0:11,0:11:26.98:0,27,527	1/1:4,21:25:53.34:743,53,0	1/1:2,23:25:37.64:634,38,0	1/1:2,15:17:8.92:169,9,0	0/0:27,0:27:63.16:0,63,1542	0/0:30,0:30:68.90:0,69,1589	0/0:25,0:25:56.18:0,56,1399	0/0:8,0:8:18:0,18,425
chr10	59054148	.	TTTTGTTTG	T	6955.33	PASS	AB=1.000;AC=24;AF=0.429;AN=56;BaseQRankSum=1.011;DP=636;FS=3.633;HRun=0;HaplotypeScore=170.2863;InbreedingCoeff=0.5720;MQ=55.34;MQ0=3;MQRankSum=-5.371;QD=21.08;ReadPosRankSum=1.439;VQSLOD=4.2379;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:18,7:24:31.07:513,31,0	1/1:2,6:8:17.99:349,18,0	0/0:25,0:18:27.02:0,27,384	0/0:15,0:11:15.05:0,15,381	1/1:12,21:34:38.90:765,39,0	0/1:18,0:18:6.89:437,0,7	0/1:21,0:21:16.94:500,0,17	1/1:25,0:25:23.97:208,24,0	1/1:8,18:26:33.11:838,33,0	0/0:16,0:31:57.20:0,57,1658	0/0:13,0:22:29.90:0,30,589	0/1:23,0:23:41.41:433,0,41	1/1:17,0:17:9.10:458,9,0	0/0:16,0:31:36.11:0,36,1150	0/0:8,0:26:18.06:0,18,625	1/1:8,14:22:33.11:838,33,0	1/1:11,16:27:21.03:477,21,0	1/1:9,12:21:11.40:237,11,0	0/0:11,0:16:21.05:0,21,620	0/0:10,0:26:51.10:0,51,1419	0/0:9,0:15:15.01:0,15,386	0/1:23,0:23:9.95:405,0,10	0/1:24,0:24:26.94:388,0,27	0/1:16,0:16:7.97:110,0,8	0/0:10,0:28:39.13:0,39,1237	0/0:15,0:30:60.19:0,60,1674	0/0:14,0:31:39.11:0,39,1136	0/0:8,0:8:18.03:0,18,426
chr10	59054472	.	C	CA	9649.70	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-10.909;DP=747;FS=2.058;HRun=2;HaplotypeScore=79.2486;InbreedingCoeff=0.9999;MQ=93.12;MQ0=0;MQRankSum=-6.750;QD=39.71;ReadPosRankSum=0.972;VQSLOD=5.1649;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,129,1626	1/1:0,13:13:33.11:487,33,0	0/0:31,1:31:52.95:0,53,941	0/0:35,0:35:83.49:0,83,1013	0/0:29,0:29:72.23:0,72,933	1/1:0,15:15:39.13:585,39,0	1/1:1,21:22:54.18:809,54,0	1/1:2,32:34:96.32:1434,96,0	0/0:29,0:29:84.26:0,84,1075	0/0:19,0:19:54.17:0,54,690	0/0:25,0:25:72.23:0,72,934	1/1:0,23:23:57.19:854,57,0	1/1:0,30:30:90.30:1349,90,0	0/0:26,0:26:78.25:0,78,1012	0/0:34,0:34:99:0,99,1270	0/0:22,0:22:66.21:0,66,857	1/1:0,22:22:60.20:897,60,0	0/0:10,0:10:30.10:0,30,389	0/0:14,0:14:42.14:0,42,544	0/0:29,0:29:87.28:0,87,1121	0/0:29,0:29:81.26:0,81,1051	1/1:2,29:31:72.24:1079,72,0	1/1:1,24:25:63.21:941,63,0	1/1:0,28:28:81.27:1214,81,0	0/0:33,0:33:99:0,99,1269	0/0:28,0:28:84.26:0,84,1078	0/0:50,0:48:99:0,150,1945	0/0:16,0:16:48.16:0,48,620
chr10	59057069	.	G	GA	1584.51	PASS	AB=0.805;AC=19;AF=0.339;AN=56;BaseQRankSum=-5.023;DP=697;FS=9.128;HRun=15;HaplotypeScore=94.6117;InbreedingCoeff=0.1173;MQ=79.08;MQ0=2;MQRankSum=0.182;QD=4.18;ReadPosRankSum=-3.277;VQSLOD=0.1979;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:18,27:47:19.03:243,0,19	0/1:3,5:8:8.55:42,0,9	0/1:30,0:22:0.40:0,0,44	0/0:22,0:17:8.33:0,8,53	1/1:7,17:25:47.65:368,48,0	0/0:28,0:29:51.40:0,51,308	0/0:23,2:25:8.50:0,8,160	1/1:14,15:31:10.61:283,11,0	1/1:8,12:21:3.82:117,4,0	0/0:26,0:27:2.57:0,3,118	0/1:22,2:24:48.67:49,0,69	0/0:13,1:14:14.25:0,14,89	0/0:23,2:25:6.93:0,7,134	0/0:19,0:21:26.30:0,26,153	0/0:25,4:31:9.93:0,10,160	1/1:7,20:31:23.07:289,23,0	0/1:9,29:39:46.30:182,0,46	0/1:10,11:21:26.32:119,0,26	0/0:13,0:17:29.56:0,30,160	0/1:24,1:27:3.91:4,0,126	0/0:15,0:19:28.22:0,28,148	0/1:18,3:22:4.92:5,0,87	0/0:25,2:30:15.99:0,16,188	0/0:22,1:24:9:0,9,159	0/1:13,2:18:34.62:35,0,89	0/1:14,1:20:3.01:3,0,65	0/0:29,1:34:19.94:0,20,212	0/1:9,2:13:13.84:14,0,87
chr10	59057987	.	ATAG	A	725.73	PASS	AB=1.000;AC=18;AF=0.321;AN=56;BaseQRankSum=-1.617;DP=346;FS=3.043;HRun=0;HaplotypeScore=65.2306;InbreedingCoeff=0.5592;MQ=58.80;MQ0=3;MQRankSum=-1.739;QD=7.11;ReadPosRankSum=-4.389;VQSLOD=1.0792;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:66.21:0,66,736	0/1:3,0:3:18.93:19,0,27	0/0:10,0:9:9.35:0,9,69	0/0:6,0:3:2.62:0,3,26	0/0:20,0:20:47.98:0,48,595	1/1:3,16:19:9.03:132,9,0	1/1:1,2:3:3.01:44,3,0	1/1:33,0:29:44.98:400,45,0	0/0:8,0:8:2.91:0,3,167	0/0:17,0:16:35.40:0,35,351	0/0:14,0:14:26.40:0,26,258	1/1:2,7:9:3.01:44,3,0	1/1:6,0:6:9.01:95,9,0	0/0:4,0:4:5.99:0,6,49	0/0:14,0:14:21.48:0,21,185	0/0:15,0:15:36.02:0,36,459	0/1:19,0:19:21.12:21,0,396	0/0:14,0:14:39.07:0,39,620	0/0:21,0:20:16.99:0,17,176	0/0:8,0:8:8.93:0,9,78	0/0:5,0:5:2.84:0,3,14	1/1:3,0:3:3:25,3,0	1/1:4,0:4:8.99:75,9,0	1/1:3,0:3:3.01:43,3,0	0/0:24,0:24:12.13:0,12,171	0/0:12,0:12:6.15:0,6,95	0/0:10,0:10:14.96:0,15,132	0/0:15,0:15:32.92:0,33,263
chr10	59058002	.	GTAATAA	G	1618.59	PASS	AB=1.000;AC=19;AF=0.396;AN=48;BaseQRankSum=3.834;DP=312;FS=4.810;HRun=0;HaplotypeScore=78.9427;InbreedingCoeff=0.6605;MQ=54.28;MQ0=5;MQRankSum=-4.465;QD=12.74;ReadPosRankSum=0.994;VQSLOD=2.1020;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:32.90:0,33,686	0/0:2,0:2:3.01:0,3,97	./.	./.	0/0:20,0:20:24.08:0,24,534	0/0:18,0:18:15.05:0,15,245	0/0:2,0:2:3.01:0,3,40	0/0:31,0:25:30.02:0,30,435	0/1:7,0:7:43.82:44,0,156	1/1:11,6:16:12.02:204,12,0	1/1:10,4:14:14.95:188,15,0	0/0:7,0:7:3.01:0,3,39	0/0:4,0:4:9.03:0,9,152	./.	1/1:6,4:10:8.97:106,9,0	0/0:13,0:13:16.30:0,16,361	0/0:22,0:22:66.18:0,66,1787	0/0:17,0:17:43.26:0,43,872	1/1:10,7:16:18.06:371,18,0	1/1:2,6:8:3.01:62,3,0	./.	0/0:2,0:2:3.01:0,3,49	0/0:5,0:5:6.02:0,6,112	0/0:1,0:1:3.01:0,3,42	1/1:6,12:18:12.04:247,12,0	1/1:2,7:9:21.04:348,21,0	1/1:5,7:12:5.98:82,6,0	1/1:14,0:14:9.03:142,9,0
chr10	59058800	.	AG	A	13178.61	PASS	AB=0.520;AC=29;AF=0.518;AN=56;BaseQRankSum=7.585;DP=662;FS=8.676;HRun=1;HaplotypeScore=87.1255;InbreedingCoeff=0.9311;MQ=90.61;MQ0=0;MQRankSum=-2.892;QD=36.51;ReadPosRankSum=4.243;VQSLOD=4.8466;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,33:33:78.26:1085,78,0	0/1:1,12:13:14.21:386,0,14	0/0:25,0:25:62.33:0,62,935	0/0:25,0:25:56.22:0,56,769	1/1:0,22:22:63.04:822,63,0	1/1:0,27:27:60.20:837,60,0	1/1:0,20:20:57.19:796,57,0	1/1:2,15:17:48.15:655,48,0	1/1:0,20:20:54.18:754,54,0	0/0:19,0:19:57.11:0,57,822	0/0:17,0:17:45.13:0,45,670	1/1:0,25:25:69.23:964,69,0	1/1:0,44:44:99:1715,123,0	0/0:22,0:22:66.20:0,66,1003	0/0:35,0:35:99:0,105,1636	1/1:0,30:30:72.24:1005,72,0	1/1:0,24:24:66.22:921,66,0	1/1:1,20:21:54.18:754,54,0	0/0:15,0:15:45.15:0,45,697	0/0:25,0:25:75.14:0,75,1051	0/0:23,0:23:69.19:0,69,1031	1/1:0,21:21:57.19:796,57,0	1/1:0,20:20:57.19:792,57,0	1/1:0,24:24:66.14:896,66,0	0/0:19,0:19:51.17:0,51,794	0/0:26,0:26:78.25:0,78,1180	0/0:25,0:25:66.12:0,66,978	0/0:25,0:25:75.13:0,75,1011
chr10	59058877	.	GT	G	10809.68	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=11.385;DP=803;FS=3.504;HRun=3;HaplotypeScore=84.7510;InbreedingCoeff=1.0000;MQ=87.07;MQ0=0;MQRankSum=-4.031;QD=32.86;ReadPosRankSum=3.938;VQSLOD=5.3530;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:81.25:0,81,1129	0/0:15,0:15:42.14:0,42,603	0/0:27,0:27:75.18:0,75,1054	0/0:26,0:26:69.55:0,70,877	0/0:30,0:30:84.26:0,84,1175	0/0:34,0:34:84.27:0,84,1189	0/0:21,0:21:60.19:0,60,845	0/0:41,0:41:99:0,123,1709	0/0:21,0:21:60.20:0,60,864	1/1:2,32:34:96.22:1168,96,0	1/1:0,21:21:60.19:743,60,0	0/0:38,0:38:99:0,105,1460	0/0:36,0:36:96.29:0,96,1356	1/1:3,30:33:87.27:1078,87,0	1/1:1,30:31:78.24:964,78,0	0/0:26,0:26:72.24:0,72,1037	0/0:27,0:27:78.22:0,78,1067	0/0:16,0:16:39.09:0,39,537	1/1:1,17:18:51.16:630,51,0	1/1:1,33:34:81.25:1003,81,0	1/1:0,28:28:81.25:1003,81,0	0/0:29,0:29:81.26:0,81,1141	0/0:21,0:21:60.19:0,60,840	0/0:33,0:33:90.24:0,90,1252	1/1:0,31:31:78.25:966,78,0	1/1:2,29:31:81.22:987,81,0	1/1:2,26:28:66.08:817,66,0	1/1:0,40:40:99:1450,117,0
chr10	59060090	.	A	AAACC	10900.64	PASS	AB=0.682;AC=27;AF=0.500;AN=54;BaseQRankSum=-3.814;DP=462;FS=9.279;HRun=0;HaplotypeScore=77.5996;InbreedingCoeff=0.9007;MQ=68.01;MQ0=2;MQRankSum=-4.116;QD=37.46;ReadPosRankSum=1.587;VQSLOD=4.1461;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,27:35:72.18:1708,72,0	./.	0/0:18,0:16:21.54:0,22,340	0/0:19,0:19:27.09:0,27,442	1/1:3,7:10:21.07:476,21,0	1/1:4,15:19:39.13:956,39,0	1/1:6,7:13:21.07:514,21,0	1/1:20,16:39:60.17:1272,60,0	1/1:8,14:22:35.81:869,36,0	0/0:7,0:7:9.03:0,9,148	0/0:8,0:8:21.07:0,21,347	1/1:7,9:17:21.07:514,21,0	1/1:3,15:18:32.89:807,33,0	0/0:13,0:13:27.09:0,27,441	0/0:16,0:16:36.10:0,36,546	0/1:8,4:15:47.97:204,0,48	1/1:10,22:32:45.15:1047,45,0	1/1:3,17:22:44.84:1102,45,0	0/0:10,0:10:12.03:0,12,174	0/0:15,0:15:30.10:0,30,489	0/0:17,0:17:36.08:0,36,559	1/1:3,7:10:12.04:254,12,0	1/1:3,6:11:12.04:294,12,0	1/1:9,12:21:36.12:883,36,0	0/0:10,0:10:24.08:0,24,396	0/0:12,0:12:30.10:0,30,495	0/0:14,0:14:39.13:0,39,644	0/0:9,0:9:24.08:0,24,396
chr10	59060176	.	AAAAT	A	4166.48	PASS	AB=0.667;AC=31;AF=0.574;AN=54;BaseQRankSum=2.219;DP=296;FS=4.259;HRun=0;HaplotypeScore=56.7212;InbreedingCoeff=0.7370;MQ=76.83;MQ0=1;MQRankSum=1.931;QD=22.52;ReadPosRankSum=0.508;VQSLOD=3.0391;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:12,0:12:24.06:299,24,0	0/0:5,0:5:12.04:0,12,193	0/0:14,0:13:11.87:0,12,265	./.	1/1:17,0:17:30.09:358,30,0	0/0:10,0:10:18.06:0,18,276	0/0:2,0:2:3.01:0,3,38	0/0:17,0:16:36.12:0,36,630	1/1:15,0:13:30.10:420,30,0	1/1:2,4:6:12.04:191,12,0	1/1:4,12:16:27.08:345,27,0	0/0:8,0:7:9.03:0,9,140	0/0:9,0:9:12.04:0,12,175	1/1:5,1:6:6.02:100,6,0	1/1:10,0:9:18.05:255,18,0	1/1:5,1:6:3.01:52,3,0	0/0:18,0:16:33.10:0,33,438	1/1:23,0:23:51.17:745,51,0	1/1:4,9:12:27.09:427,27,0	0/1:8,8:16:22.53:256,0,23	1/1:6,0:6:6.02:95,6,0	0/0:9,0:9:15.05:0,15,230	0/0:11,0:11:15.05:0,15,255	0/0:4,0:4:6.02:0,6,72	1/1:2,5:7:3.01:52,3,0	1/1:4,0:4:3.01:50,3,0	1/1:3,11:14:9.03:157,9,0	1/1:2,12:14:21.07:365,21,0
chr10	59060185	.	AAATAAAATAAAT	A	3527.40	PASS	AB=0.950;AC=20;AF=0.370;AN=54;BaseQRankSum=-0.104;DP=233;FS=12.509;HRun=0;HaplotypeScore=80.0348;InbreedingCoeff=0.1228;MQ=73.86;MQ0=0;MQRankSum=1.481;QD=26.13;ReadPosRankSum=1.452;VQSLOD=1.2074;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,3:9:27.07:495,27,0	0/0:4,0:4:12.01:0,12,165	0/0:12,0:11:11.87:0,12,265	./.	0/1:0,11:13:6.90:361,0,7	0/1:8,0:8:30.84:31,0,255	0/0:1,0:1:3.01:0,3,38	0/0:14,0:13:36.12:0,36,630	1/1:9,3:12:30.10:501,30,0	0/1:4,0:4:74.75:75,0,113	0/1:14,0:14:99:174,0,282	0/0:5,0:5:9.03:0,9,140	0/1:5,0:5:37.42:37,0,157	0/1:5,0:5:35.80:36,0,303	1/1:7,0:6:18.05:255,18,0	0/0:3,0:3:3.01:0,3,70	0/0:12,0:12:33.10:0,33,438	1/1:19,2:21:51.16:872,51,0	0/1:13,0:12:99:249,0,253	0/1:12,0:12:99:256,0,332	1/1:2,0:2:6.02:95,6,0	0/1:7,0:7:46.90:47,0,177	0/0:6,0:6:15.05:0,15,255	0/0:3,0:3:6.02:0,6,72	0/0:9,0:9:12.04:0,12,437	0/1:3,0:3:43.62:44,0,103	0/0:12,0:12:12.04:0,12,316	0/0:15,0:15:30.10:0,30,860
chr10	59060189	.	AAAATAAATAAATAAATAAAT	A	672.58	PASS	AC=12;AF=0.286;AN=42;BaseQRankSum=-0.473;DP=220;FS=5.604;HRun=0;HaplotypeScore=122.5625;InbreedingCoeff=0.6024;MQ=68.06;MQ0=0;MQRankSum=-1.660;QD=24.02;ReadPosRankSum=2.077;VQSLOD=2.1308;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:8:16.30:0,16,287	1/1:4,0:4:3.01:88,3,0	./.	./.	0/0:13,0:13:15.05:0,15,387	1/1:6,1:7:3.01:160,3,0	./.	./.	0/0:11,0:11:15.05:0,15,435	0/0:4,0:4:6.02:0,6,397	0/0:13,0:13:12.04:0,12,764	1/1:3,0:3:3:27,3,0	1/1:4,1:5:6.02:218,6,0	0/0:4,0:4:9.03:0,9,676	0/0:6,0:5:3.01:0,3,121	0/0:1,0:1:3.01:0,3,205	./.	0/0:24,0:24:39.13:0,39,1177	0/0:12,0:11:16.30:0,16,881	0/0:11,0:11:9.03:0,9,760	./.	1/1:4,2:6:6.02:281,6,0	./.	1/1:3,0:3:3.01:31,3,0	0/0:10,0:10:18.06:0,18,1132	0/0:2,0:2:3.01:0,3,197	0/0:12,0:12:12.04:0,12,809	0/0:17,0:17:36.12:0,36,2422
chr10	59060209	.	T	TA	1179.18	PASS	AB=0.805;AC=9;AF=0.173;AN=52;BaseQRankSum=-6.903;DP=202;FS=2.412;HRun=3;HaplotypeScore=39.5167;InbreedingCoeff=0.2268;MQ=52.02;MQ0=4;MQRankSum=0.431;QD=19.99;ReadPosRankSum=-6.831;VQSLOD=1.2881;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:27.06:0,27,306	0/1:2,1:3:31.74:32,0,55	./.	./.	0/0:12,0:12:18.03:0,18,201	0/1:5,1:6:25.31:116,0,25	0/1:2,0:2:29.89:36,0,30	1/1:6,22:26:27.20:774,27,0	0/0:5,0:5:15.04:0,15,174	0/0:3,0:3:9.03:0,9,108	0/0:7,0:6:18.05:0,18,212	0/0:2,0:2:6.02:0,6,72	0/1:3,2:5:21.01:108,0,21	0/0:5,0:5:15.05:0,15,179	0/0:2,0:1:3.01:0,3,36	0/0:2,0:2:6.02:0,6,71	0/1:7,5:12:99:134,0,186	0/0:23,0:23:66.17:0,66,769	0/0:14,0:11:30.56:0,31,357	0/0:5,0:5:8.94:0,9,89	0/0:1,0:1:0.47:0,0,1	0/0:5,0:5:14.07:0,14,149	1/1:0,3:3:9.03:122,9,0	0/0:3,0:3:6.02:0,6,72	0/0:10,0:10:24.07:0,24,287	0/0:4,0:4:12.04:0,12,144	0/0:8,0:8:15.05:0,15,180	0/0:17,0:17:48.15:0,48,576
chr10	59061535	.	G	GC	11003.22	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-18.678;DP=790;FS=3.157;HRun=1;HaplotypeScore=74.3151;InbreedingCoeff=1.0000;MQ=67.33;MQ0=0;MQRankSum=-0.911;QD=41.37;ReadPosRankSum=0.965;VQSLOD=5.4770;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,144,1852	1/1:0,13:13:36.12:540,36,0	0/0:27,0:25:68.12:0,68,793	0/0:26,0:26:65.42:0,65,816	0/0:34,0:34:96.28:0,96,1214	1/1:1,29:30:72.24:1077,72,0	1/1:1,28:29:81.27:1214,81,0	1/1:4,40:44:99:1768,120,0	0/0:34,0:34:99:0,102,1303	0/0:20,0:20:57.19:0,57,739	0/0:26,0:26:75.24:0,75,973	1/1:0,13:13:39.13:584,39,0	1/1:1,33:34:93.32:1394,93,0	0/0:30,0:30:87.28:0,87,1129	0/0:19,0:19:51.39:0,51,681	0/0:31,0:31:90.29:0,90,1166	1/1:1,24:25:72.21:1055,72,0	0/0:16,0:16:48.13:0,48,604	0/0:25,0:25:75.24:0,75,959	0/0:30,0:30:90.29:0,90,1166	0/0:40,0:40:99:0,120,1526	1/1:0,25:25:69.23:1033,69,0	1/1:0,21:21:60.20:899,60,0	1/1:0,32:32:96.33:1439,96,0	0/0:35,0:35:99:0,102,1324	0/0:28,0:28:81.24:0,81,1035	0/0:41,0:41:99:0,114,1462	0/0:13,0:13:39.13:0,39,506
chr10	59062444	.	C	CAG	4860.21	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=3.484;DP=766;FS=3.744;HRun=0;HaplotypeScore=155.8408;InbreedingCoeff=0.9996;MQ=61.05;MQ0=7;MQRankSum=-0.551;QD=30.57;ReadPosRankSum=2.160;VQSLOD=6.5019;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:18,17:35:42.14:745,42,0	0/0:12,0:12:33.11:0,33,469	0/0:43,0:18:45.06:0,45,555	0/0:42,0:26:40.46:0,40,520	1/1:13,24:37:57.19:1007,57,0	0/0:28,0:27:66.21:0,66,925	0/0:13,0:13:27.54:0,28,368	0/0:32,0:32:90.27:0,90,1219	1/1:10,25:35:87.13:1385,87,0	0/0:23,0:23:69.23:0,69,976	0/0:20,0:20:60.18:0,60,837	0/0:24,0:23:63.21:0,63,901	0/0:30,0:30:84.27:0,84,1182	0/0:23,0:23:66.22:0,66,945	0/0:24,0:24:72.24:0,72,1028	1/1:13,19:32:51.17:907,51,0	0/0:22,0:22:63.21:0,63,900	1/1:2,18:20:45.15:817,45,0	0/0:20,0:17:45.14:0,45,623	0/0:32,0:32:93.30:0,93,1314	0/0:20,0:20:51.17:0,51,728	0/0:28,0:28:78.26:0,78,1115	0/0:41,0:41:92.04:0,92,1250	0/0:29,0:29:60.16:0,60,814	0/0:18,0:18:45.15:0,45,641	0/0:40,0:40:99:0,114,1602	0/0:31,0:31:84.28:0,84,1201	0/0:12,0:12:30.10:0,30,429
chr10	59062506	.	AG	A	4974.06	PASS	AB=0.734;AC=50;AF=0.893;AN=56;BaseQRankSum=-3.274;DP=571;FS=1.120;HRun=12;HaplotypeScore=146.1302;InbreedingCoeff=0.4978;MQ=67.48;MQ0=10;MQRankSum=-0.332;QD=10.09;ReadPosRankSum=4.697;VQSLOD=3.0026;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,18:28:32.31:253,32,0	1/1:2,5:7:14.94:115,15,0	0/0:36,0:20:5.64:0,6,53	0/0:41,0:17:15.79:0,16,98	1/1:8,9:18:20:161,20,0	1/1:4,23:27:55.75:438,56,0	1/1:3,11:14:23.47:184,23,0	1/1:15,23:37:47.14:363,47,0	1/1:5,25:29:62.21:485,62,0	1/1:5,0:16:12.14:35,12,0	1/1:7,0:9:3.59:11,4,0	1/1:6,15:20:39.57:302,40,0	1/1:3,23:26:68.73:532,69,0	1/1:11,1:20:15.27:42,15,0	1/1:3,0:12:8.14:24,8,0	1/1:4,24:26:44.53:346,45,0	1/1:5,17:22:44.76:347,45,0	1/1:3,6:9:17.93:139,18,0	0/1:10,0:13:4.78:6,0,5	1/1:8,0:12:5.87:17,6,0	0/1:9,1:19:14.76:27,0,15	1/1:2,11:13:26.87:207,27,0	1/1:4,23:27:48.15:372,48,0	1/1:6,27:33:59.76:462,60,0	1/1:5,0:9:9.96:29,10,0	1/1:15,0:16:9.49:27,9,0	1/1:5,0:14:8.10:23,8,0	1/1:4,0:12:6.91:26,7,0
chr10	59063513	.	CA	C	14479.76	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=18.195;DP=714;FS=0.563;HRun=2;HaplotypeScore=81.6586;InbreedingCoeff=0.9994;MQ=72.08;MQ0=0;MQRankSum=-0.781;QD=37.03;ReadPosRankSum=3.064;VQSLOD=5.4598;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,40:40:99:1480,114,0	1/1:0,7:7:21.07:273,21,0	0/0:20,0:20:55.23:0,55,842	0/0:12,0:12:33.06:0,33,428	1/1:1,33:34:93.22:1186,93,0	1/1:0,20:20:60.20:779,60,0	1/1:1,22:23:57.19:740,57,0	1/1:1,34:35:99:1297,102,0	1/1:1,21:22:63.20:818,63,0	0/0:24,0:24:69.23:0,69,1018	0/0:25,0:25:75.24:0,75,1104	1/1:1,34:35:96.31:1246,96,0	1/1:0,25:25:72.23:935,72,0	0/0:28,0:28:84.28:0,84,1257	0/0:30,0:30:90.23:0,90,1284	1/1:0,23:23:69.22:896,69,0	1/1:0,46:46:99:1792,138,0	1/1:0,29:29:87.28:1130,87,0	0/0:21,0:21:63.21:0,63,945	0/0:42,0:42:99:0,126,1885	0/0:14,0:14:42.14:0,42,627	1/1:1,21:22:60.19:779,60,0	1/1:0,18:18:54.18:701,54,0	1/1:0,12:12:33.11:428,33,0	0/0:27,0:27:75.25:0,75,1122	0/0:28,0:28:84.28:0,84,1242	0/0:26,0:26:78.26:0,78,1168	0/0:26,0:26:78.26:0,78,1167
chr10	59064936	.	GGGTT	G	464.12	PASS	AB=0.897;AC=8;AF=0.143;AN=56;BaseQRankSum=-2.206;DP=752;FS=10.524;HRun=0;HaplotypeScore=195.6838;InbreedingCoeff=-0.1606;MQ=66.74;MQ0=4;MQRankSum=-4.059;QD=2.05;ReadPosRankSum=-5.868;VQSLOD=-0.2169;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:27,7:34:94.41:94,0,940	0/1:8,5:13:99:140,0,384	0/0:21,0:16:43.84:0,44,962	0/0:23,0:16:40.97:0,41,801	0/1:30,2:32:31.57:32,0,1249	0/0:29,0:29:87.30:0,87,1655	0/0:21,0:21:63.22:0,63,1180	0/1:39,1:39:6.19:6,0,1910	0/1:32,2:34:77.87:78,0,1459	0/0:43,0:43:99:0,123,2876	0/0:18,0:18:32.80:0,33,964	0/0:27,0:27:81.24:0,81,1395	0/0:35,0:35:99:0,105,1977	0/0:24,0:24:69.19:0,69,1452	0/0:36,0:36:92.41:0,92,2222	0/1:30,6:36:99:173,0,1171	0/1:18,2:19:65.76:66,0,786	0/1:17,0:17:5.69:6,0,816	0/0:19,0:18:26.97:0,27,1126	0/0:39,0:39:7.42:0,7,2435	0/0:17,0:17:51.16:0,51,1216	0/0:25,0:25:75.25:0,75,1404	0/0:26,0:26:74.28:0,74,1363	0/0:24,0:24:72.23:0,72,1355	0/0:31,0:31:87.27:0,87,1912	0/0:31,0:31:91.19:0,91,2192	0/0:26,0:25:58.41:0,58,1189	0/0:11,0:11:33.11:0,33,661
chr10	59064940	.	T	TTTTTG	17171.09	PASS	AC=36;AF=0.667;AN=54;BaseQRankSum=-12.043;DP=771;FS=4.543;HRun=0;HaplotypeScore=164.9601;InbreedingCoeff=0.9072;MQ=62.68;MQ0=4;MQRankSum=-0.261;QD=33.41;ReadPosRankSum=-1.208;VQSLOD=4.5427;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:35:3.83:994,4,0	1/1:11,0:14:18.06:424,18,0	0/0:21,0:16:5.93:0,6,100	0/0:27,0:16:3.35:0,3,11	1/1:22,0:32:42.12:1057,42,0	0/0:29,0:29:33.30:0,33,709	0/0:23,0:23:27.04:0,27,343	1/1:42,0:42:21.03:246,21,0	1/1:23,0:34:45.15:1108,45,0	1/1:22,21:44:69.21:1800,69,0	1/1:6,12:18:35.96:933,36,0	0/0:25,0:25:18.15:0,18,468	0/0:35,0:35:54.18:0,54,739	1/1:8,15:23:45.15:1257,45,0	1/1:19,18:37:39.13:1093,39,0	1/1:16,0:33:63.20:1550,63,0	1/1:18,0:18:13.85:199,14,0	./.	1/1:13,6:18:18.06:503,18,0	1/1:22,19:46:69.12:1703,69,0	1/1:13,3:17:12.04:322,12,0	0/0:25,0:25:23.19:0,23,500	0/0:27,0:27:13.19:0,13,421	0/0:26,0:26:10.31:0,10,632	1/1:11,20:31:51.18:1429,51,0	1/1:16,16:33:51.11:1209,51,0	1/1:10,16:25:30.10:840,30,0	1/1:3,7:10:18.06:504,18,0
chr10	59065087	.	T	TTCC	13758.96	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=12.699;DP=752;FS=1.933;HRun=0;HaplotypeScore=124.1809;InbreedingCoeff=0.9727;MQ=66.38;MQ0=1;MQRankSum=-0.892;QD=32.92;ReadPosRankSum=0.155;VQSLOD=5.4122;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,34:48:78.27:1575,78,0	1/1:1,13:14:33.11:669,33,0	0/0:31,0:24:9.84:0,10,250	0/0:23,0:19:4.57:0,5,192	1/1:3,26:32:63.13:1142,63,0	1/1:6,8:14:21.07:411,21,0	1/1:6,26:32:54.19:1103,54,0	1/1:20,16:39:50.89:812,51,0	1/1:3,21:24:30.10:622,30,0	0/0:25,0:25:66.22:0,66,968	0/0:20,0:20:48.16:0,48,693	1/1:4,24:29:45.15:933,45,0	1/1:3,23:26:51.18:1045,51,0	0/0:32,0:32:81.26:0,81,1155	0/0:29,0:29:63.21:0,63,927	1/1:4,29:34:75.26:1550,75,0	1/1:8,20:30:36.66:922,37,0	1/1:10,8:18:18.43:299,18,0	0/0:19,0:19:36.08:0,36,498	0/0:26,0:26:69.22:0,69,992	0/0:31,0:31:81.23:0,81,1168	1/1:4,16:21:39.13:803,39,0	1/1:7,11:18:26.87:505,27,0	1/1:6,33:39:66.23:1368,66,0	0/0:29,0:29:75.25:0,75,1079	0/0:27,0:27:57.19:0,57,819	0/0:27,0:27:69.20:0,69,956	0/0:15,0:15:36.12:0,36,528
chr10	59067342	.	G	GC	5570.37	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-7.275;DP=588;FS=0.000;HRun=8;HaplotypeScore=70.9133;InbreedingCoeff=0.9272;MQ=82.64;MQ0=0;MQRankSum=-4.434;QD=18.76;ReadPosRankSum=2.841;VQSLOD=4.6912;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:29:12.19:77,12,0	1/1:2,12:14:33.06:366,33,0	0/0:29,0:29:62.26:0,62,533	0/0:20,0:20:47.92:0,48,420	1/1:6,0:11:8.52:43,9,0	1/1:3,15:18:42.10:471,42,0	1/1:2,27:29:44.48:769,44,0	1/1:7,13:20:30.09:346,30,0	1/1:11,2:30:17.64:99,18,0	0/0:23,0:23:48.01:0,48,435	0/0:10,0:10:27.01:0,27,247	1/1:4,28:32:78.23:900,78,0	1/1:4,19:23:2.23:533,2,0	0/0:34,0:34:75:0,75,680	0/0:22,0:22:57.03:0,57,521	1/1:2,0:12:19.89:101,20,0	1/1:3,17:20:57.16:648,57,0	1/1:10,0:10:10.19:74,10,0	0/0:21,0:21:42.01:0,42,384	0/0:19,0:19:50.95:0,51,456	0/0:42,0:42:99:0,99,905	1/1:0,11:11:24.07:277,24,0	1/1:1,4:5:3.01:35,3,0	1/1:6,26:32:72.21:831,72,0	0/0:11,0:11:21:0,21,192	0/0:28,0:28:75.01:0,75,673	0/0:18,0:18:45.02:0,45,412	0/0:14,0:14:36.02:0,36,329
chr10	59068120	.	TGGTGGTGGTGATG	T	21273.93	PASS	AB=0.607;AC=29;AF=0.518;AN=56;BaseQRankSum=17.561;DP=599;FS=1.971;HRun=0;HaplotypeScore=240.6620;InbreedingCoeff=0.9143;MQ=77.22;MQ0=0;MQRankSum=-16.505;QD=76.25;ReadPosRankSum=3.003;VQSLOD=4.6160;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,23:29:63.30:2174,63,0	1/1:3,5:8:15.05:584,15,0	0/0:17,0:17:39.12:0,39,1956	0/0:29,0:29:24.84:0,25,2979	1/1:3,16:19:36.04:1209,36,0	1/1:2,10:12:30.10:1168,30,0	1/1:3,17:20:48.16:1868,48,0	1/1:8,18:26:54.13:1583,54,0	1/1:7,14:21:39.13:1518,39,0	0/0:25,0:25:72.24:0,72,4234	0/0:10,0:10:30.10:0,30,1888	1/1:4,15:19:45.15:1751,45,0	1/1:1,24:25:60.21:2335,60,0	0/0:19,0:19:54.19:0,54,3382	0/0:43,0:43:99:0,117,6905	1/1:7,27:34:72.25:2802,72,0	1/1:3,7:10:18.05:701,18,0	1/1:3,3:6:9.03:350,9,0	0/0:28,0:28:78.19:0,78,3818	0/0:17,0:17:42.14:0,42,2663	0/0:58,0:58:99:0,160,9001	0/1:6,11:17:99:907,0,168	1/1:3,15:18:45.15:1740,45,0	1/1:5,10:15:14.83:584,15,0	0/0:16,0:16:45.11:0,45,2331	0/0:18,0:18:48.14:0,48,2703	0/0:31,0:31:78.27:0,78,4949	0/0:9,0:9:24.08:0,24,1510
chr10	59068788	.	TTCATCATCATCA	T	5501.34	PASS	AC=18;AF=0.375;AN=48;BaseQRankSum=2.682;DP=519;FS=0.000;HRun=0;HaplotypeScore=182.7301;InbreedingCoeff=0.9449;MQ=63.94;MQ0=5;MQRankSum=-6.549;QD=33.96;ReadPosRankSum=2.416;VQSLOD=3.7350;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:35:54.15:0,54,1564	0/0:5,0:10:12.04:0,12,145	./.	./.	0/0:16,0:31:60.21:0,60,1970	0/0:12,0:20:24.08:0,24,446	0/0:14,0:14:33.11:0,33,1685	0/0:37,0:36:15.03:0,15,237	0/0:6,0:16:36.12:0,36,1176	1/1:12,7:19:21.07:515,21,0	1/1:9,8:17:17.98:421,18,0	0/0:16,0:16:21.07:0,21,1221	0/0:22,0:22:48.13:0,48,2285	1/1:9,9:18:21.07:716,21,0	1/1:9,4:13:15.05:512,15,0	0/0:26,0:26:45.14:0,45,2133	0/0:11,0:22:18.06:0,18,253	0/0:5,0:15:21.07:0,21,666	./.	1/1:11,11:21:30.06:827,30,0	./.	0/0:13,0:13:15.05:0,15,784	0/0:12,0:12:15.05:0,15,787	0/0:13,0:13:30.10:0,30,1661	1/1:11,8:19:15.05:512,15,0	1/1:13,12:25:36.12:1078,36,0	1/1:12,8:19:24.08:819,24,0	1/1:9,0:9:3.01:102,3,0
chr10	59070276	.	G	GCGATT	7449.54	PASS	AB=0.574;AC=27;AF=0.500;AN=54;BaseQRankSum=12.755;DP=537;FS=4.882;HRun=0;HaplotypeScore=93.3766;InbreedingCoeff=0.8621;MQ=57.20;MQ0=1;MQRankSum=-10.837;QD=30.78;ReadPosRankSum=-6.211;VQSLOD=3.0948;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:0,19:13:24.08:631,24,0	1/1:3,11:7:11.30:354,11,0	0/0:14,0:13:36.11:0,36,744	0/0:10,0:10:18.06:0,18,378	1/1:1,16:8:12.04:239,12,0	1/1:2,17:11:14.72:446,15,0	1/1:1,12:3:6.02:137,6,0	1/1:1,11:3:3.01:43,3,0	1/1:5,18:9:24.08:653,24,0	0/0:27,0:27:81.28:0,81,1858	0/0:26,0:26:71.99:0,72,1657	1/1:4,21:20:41.73:1203,42,0	0/1:7,18:19:31.98:750,0,32	0/0:23,0:23:66.23:0,66,1495	0/0:32,0:32:96.33:0,96,2208	1/1:4,15:14:37.01:1072,37,0	1/1:1,12:9:18.06:552,18,0	1/1:2,6:5:9.03:275,9,0	0/0:14,0:14:42.13:0,42,905	0/0:22,0:22:66.23:0,66,1535	0/0:28,0:28:84.29:0,84,1954	1/1:1,13:9:24.08:637,24,0	1/1:3,12:13:18.95:459,19,0	./.	0/0:26,0:26:75.26:0,75,1748	0/0:27,0:27:81.28:0,81,1855	0/0:30,0:30:90.31:0,90,2097	0/0:12,0:12:36.12:0,36,839
chr10	59070278	.	A	AG	3963.02	PASS	AB=0.569;AC=26;AF=0.464;AN=56;BaseQRankSum=14.307;DP=589;FS=5.307;HRun=0;HaplotypeScore=92.9304;InbreedingCoeff=0.7114;MQ=54.05;MQ0=0;MQRankSum=-11.963;QD=13.48;ReadPosRankSum=-5.720;VQSLOD=2.8669;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:4,19:12:4.94:220,0,5	1/1:3,11:7:4.80:150,5,0	0/0:15,0:15:45.09:0,45,524	0/0:10,0:9:21:0,21,253	0/1:2,16:9:2.83:102,0,3	1/1:8,17:17:26.88:326,27,0	1/1:5,12:5:6.02:86,6,0	1/1:8,11:7:3.01:47,3,0	1/1:1,21:8:18.06:247,18,0	0/0:29,0:29:81.26:0,81,1116	0/0:25,0:25:72.03:0,72,964	1/1:7,23:24:35.12:651,35,0	0/1:8,22:22:17.02:443,0,17	0/0:22,0:22:66.20:0,66,888	0/0:32,0:32:96.32:0,96,1341	1/1:7,17:19:47.98:636,48,0	1/1:1,12:9:20.10:248,20,0	1/1:3,7:7:12.04:162,12,0	0/0:14,0:14:39.12:0,39,530	0/0:22,0:22:66.22:0,66,919	0/0:31,0:31:84.25:0,84,1152	0/1:9,14:15:0.70:301,0,1	1/1:7,12:16:21:256,21,0	1/1:3,3:4:6.02:87,6,0	0/0:26,0:26:78.26:0,78,1085	0/0:26,0:26:78.26:0,78,1091	0/0:31,0:31:90.30:0,90,1255	0/0:12,0:12:36.12:0,36,503
chr10	59070399	.	T	TA	10317.42	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-14.782;DP=695;FS=8.269;HRun=6;HaplotypeScore=61.8867;InbreedingCoeff=0.9949;MQ=66.84;MQ0=0;MQRankSum=-0.082;QD=27.15;ReadPosRankSum=0.389;VQSLOD=5.1635;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,39:35:90.28:1121,90,0	1/1:0,10:10:30.10:377,30,0	0/0:6,0:6:12.01:0,12,122	0/0:8,0:8:21.05:0,21,214	1/1:2,31:33:84.27:1053,84,0	1/1:0,24:21:54.17:679,54,0	1/1:3,24:23:51.16:642,51,0	1/1:2,31:26:66.16:788,66,0	1/1:1,25:22:54.17:675,54,0	0/0:26,0:26:75.17:0,75,765	0/0:25,0:25:63.13:0,63,636	1/1:4,19:20:42.09:511,42,0	1/1:1,27:25:60.19:755,60,0	0/0:33,0:33:90.18:0,90,910	0/0:27,0:27:72.15:0,72,728	1/1:2,20:19:48.15:604,48,0	1/1:1,18:17:45.14:566,45,0	1/1:1,14:14:30.10:376,30,0	0/0:17,0:17:39.08:0,39,398	0/0:27,0:27:75.17:0,75,764	0/0:19,0:19:51.12:0,51,520	1/1:1,21:22:54.13:661,54,0	1/1:4,29:33:73.12:905,73,0	1/1:3,20:22:48.15:604,48,0	0/0:45,0:45:99:0,129,1308	0/0:38,0:38:99:0,99,1002	0/0:35,0:35:99:0,99,1009	0/0:9,0:9:27.06:0,27,275
chr10	59071227	.	C	CTCA	17140.35	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-15.522;DP=837;FS=9.124;HRun=0;HaplotypeScore=107.4282;InbreedingCoeff=0.9993;MQ=70.32;MQ0=0;MQRankSum=-4.617;QD=51.94;ReadPosRankSum=1.849;VQSLOD=6.8100;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,129,2070	0/0:10,0:10:27.06:0,27,414	0/0:18,0:16:41.73:0,42,637	0/0:29,0:29:71.49:0,71,1174	0/0:31,0:31:93.31:0,93,1495	0/0:31,0:31:84.27:0,84,1332	0/0:19,0:19:51.64:0,52,801	0/0:40,0:40:96.31:0,96,1518	0/0:30,0:30:84.29:0,84,1366	1/1:2,25:31:90.27:1848,90,0	1/1:4,27:31:84.28:1757,84,0	0/0:36,0:36:99:0,102,1644	0/0:42,0:42:99:0,120,1910	1/1:4,24:28:66.23:1468,66,0	1/1:4,38:42:93.09:2044,93,0	0/0:34,0:34:93.32:0,93,1516	0/0:36,0:36:93.32:0,93,1487	0/0:23,0:23:60.20:0,60,975	1/1:2,16:18:48.15:1006,48,0	1/1:1,20:22:54.18:1165,54,0	1/1:4,49:53:99:2653,123,0	0/0:29,0:29:84.27:0,84,1334	0/0:31,0:31:84.29:0,84,1368	0/0:23,0:23:63.21:0,63,1005	1/1:5,24:29:63.21:1275,63,0	1/1:2,26:29:81.28:1741,81,0	1/1:2,30:32:81.28:1744,81,0	1/1:2,11:13:21.07:438,21,0
chr10	59073906	.	A	AAAAAAC	2342.07	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=0.752;DP=715;FS=12.453;HRun=0;HaplotypeScore=149.0440;InbreedingCoeff=0.9338;MQ=66.83;MQ0=0;MQRankSum=-6.644;QD=25.46;ReadPosRankSum=-6.213;VQSLOD=1.2069;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:70.08:0,70,1473	1/1:4,3:8:15.05:404,15,0	0/0:20,0:19:24.08:0,24,447	0/0:22,0:20:20.61:0,21,335	0/0:21,0:21:33.11:0,33,646	0/0:23,0:23:48.16:0,48,974	0/0:20,0:20:39.11:0,39,679	1/1:42,5:50:45.14:995,45,0	0/0:20,0:20:36.09:0,36,655	0/0:22,0:22:54.18:0,54,1097	0/0:24,0:24:50.45:0,50,1035	0/0:15,0:15:30.10:0,30,589	0/0:32,0:32:63.18:0,63,1198	0/0:16,0:16:24.06:0,24,412	0/0:34,0:34:72.21:0,72,1365	0/0:30,0:30:48.15:0,48,944	1/1:25,9:34:38.92:1084,39,0	0/0:28,0:28:45.14:0,45,855	0/0:19,0:19:24.06:0,24,436	0/0:29,0:29:60.17:0,60,1140	0/0:25,0:25:39.12:0,39,731	0/0:27,0:27:48.16:0,48,952	0/0:25,0:25:33.10:0,33,637	0/0:26,0:26:5.85:0,6,817	0/0:35,0:35:78.27:0,78,1578	0/0:32,0:32:51.16:0,51,978	0/0:33,0:33:66.19:0,66,1251	0/0:8,0:8:9.03:0,9,184
chr10	59079315	.	T	TA	15714.36	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=-14.481;DP=707;FS=0.000;HRun=8;HaplotypeScore=59.2574;InbreedingCoeff=0.9965;MQ=71.48;MQ0=0;MQRankSum=-3.525;QD=29.59;ReadPosRankSum=1.670;VQSLOD=4.7615;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,2:30:14.81:0,15,645	1/1:1,11:12:33.06:366,33,0	0/0:11,0:11:23.98:0,24,212	0/0:17,0:17:32.53:0,33,317	0/0:42,0:41:99:0,123,1114	1/1:1,16:17:48.14:554,48,0	1/1:2,19:21:54.16:623,54,0	1/1:0,33:33:99:1122,99,0	0/0:20,0:20:54.02:0,54,494	1/1:5,28:33:84.25:970,84,0	1/1:2,22:24:69.16:776,69,0	1/1:1,15:17:47.97:533,48,0	1/1:3,29:32:78.23:900,78,0	1/1:1,27:28:81.24:932,81,0	1/1:3,19:22:51.15:589,51,0	0/0:31,0:31:87.03:0,87,792	1/1:3,24:27:72.21:831,72,0	0/0:25,0:25:63.02:0,63,577	1/1:3,21:24:60.17:682,60,0	1/1:7,40:47:99:1351,120,0	1/1:4,16:20:45.13:519,45,0	1/1:2,21:23:54.08:605,54,0	1/1:4,31:35:87.09:1004,87,0	1/1:1,15:16:45.13:519,45,0	1/1:1,20:21:57.13:643,57,0	1/1:2,26:28:75.19:844,75,0	1/1:3,25:28:60.18:692,60,0	1/1:0,23:23:57.17:658,57,0
chr10	59079620	.	CA	C	1196.82	PASS	AB=0.747;AC=10;AF=0.179;AN=56;BaseQRankSum=-11.220;DP=626;FS=0.463;HRun=14;HaplotypeScore=137.6692;InbreedingCoeff=0.6939;MQ=67.72;MQ0=4;MQRankSum=2.846;QD=8.09;ReadPosRankSum=7.417;VQSLOD=1.6321;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:9,21:31:17.91:294,0,18	0/0:4,0:10:25.77:0,26,136	0/0:40,0:22:16.85:0,17,126	0/0:22,0:11:2.41:0,2,47	1/1:8,21:31:54.49:361,54,0	0/0:10,0:18:42.07:0,42,255	0/0:6,0:11:19.97:0,20,103	0/0:26,1:30:32.16:0,32,283	1/1:5,10:16:28.79:191,29,0	0/0:13,0:30:41.33:0,41,219	0/0:8,0:20:20.02:0,20,103	0/0:19,0:25:46.25:0,46,271	0/1:14,2:19:8.88:9,0,135	0/0:10,0:17:15.28:0,15,81	0/0:17,0:17:33.35:0,33,179	1/1:6,15:22:19.91:249,20,0	0/0:15,1:26:29.90:0,30,235	1/1:10,17:28:38.26:259,38,0	0/0:13,0:22:42.71:0,43,216	0/0:22,0:35:52.61:0,53,289	0/0:6,0:15:14.40:0,14,85	0/0:11,0:18:37.72:0,38,223	0/0:12,0:20:46.16:0,46,270	0/0:5,0:9:11.51:0,12,63	0/0:5,0:23:30.29:0,30,153	0/0:12,0:32:63.14:0,63,391	0/0:7,0:24:22.59:0,23,119	0/0:0,0:8:5.68:0,6,29
chr10	59079639	.	G	GA	4115.17	PASS	AB=1.000;AC=22;AF=0.393;AN=56;BaseQRankSum=4.324;DP=640;FS=13.813;HRun=9;HaplotypeScore=97.2927;InbreedingCoeff=0.7958;MQ=60.54;MQ0=7;MQRankSum=-0.984;QD=15.83;ReadPosRankSum=-1.800;VQSLOD=2.1558;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:68.88:0,69,598	1/1:3,6:9:21.05:224,21,0	0/1:37,0:17:4.68:5,0,176	0/0:22,0:10:22.96:0,23,174	0/0:33,0:33:89.94:0,90,777	1/1:7,12:18:24.03:253,24,0	1/1:4,14:17:36.09:390,36,0	1/1:9,31:38:87.17:936,87,0	0/0:18,0:18:38.98:0,39,337	0/0:31,0:31:56.88:0,57,484	0/0:20,0:20:35.90:0,36,301	1/1:6,21:27:57.13:615,57,0	1/1:6,12:17:7.85:289,8,0	0/0:11,0:11:11.98:0,12,104	0/1:16,0:15:27.76:28,0,128	0/0:24,0:23:53.96:0,54,469	1/1:12,8:20:3.99:259,4,0	0/0:25,0:25:53.94:0,54,463	0/0:23,0:22:5.45:0,5,272	0/0:33,0:33:62.82:0,63,541	0/0:12,0:12:14.74:0,15,123	1/1:8,13:21:42.57:450,43,0	1/1:10,12:22:45.10:480,45,0	1/1:6,7:13:18:186,18,0	0/0:30,0:30:48.02:0,48,435	0/0:28,0:27:51.71:0,52,427	0/0:34,0:34:46.89:0,47,387	0/0:4,0:4:5.96:0,6,44
chr10	59080054	.	CCA	C	8069.24	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=13.990;DP=715;FS=1.352;HRun=0;HaplotypeScore=92.3691;InbreedingCoeff=0.9993;MQ=95.91;MQ0=0;MQRankSum=-4.906;QD=34.78;ReadPosRankSum=4.481;VQSLOD=7.0187;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:67,0:67:99:0,184,3171	1/1:0,7:7:21.07:284,21,0	0/0:32,0:32:72.26:0,72,1275	0/0:36,0:36:90.14:0,90,1407	0/0:26,0:26:75.24:0,75,1286	1/1:1,19:20:54.18:731,54,0	1/1:2,21:23:54.18:731,54,0	1/1:4,12:16:36.08:441,36,0	0/0:16,0:16:45.13:0,45,755	0/0:31,0:31:93.24:0,93,1517	0/0:19,0:19:45.14:0,45,752	1/1:1,38:39:99:1502,111,0	1/1:1,23:24:66.22:893,66,0	0/0:15,0:15:42.11:0,42,680	0/0:16,0:16:48.16:0,48,841	0/0:25,0:25:72.25:0,72,1262	1/1:2,23:25:63.21:852,63,0	0/0:26,0:26:69.24:0,69,1209	0/0:23,0:23:66.21:0,66,1129	0/0:27,0:27:78.27:0,78,1353	0/0:31,0:31:93.29:0,93,1575	1/1:2,30:32:78.26:1055,78,0	1/1:3,17:20:45:608,45,0	1/1:0,26:26:72.24:974,72,0	0/0:21,0:21:51.17:0,51,894	0/0:35,0:35:99:0,99,1678	0/0:25,0:25:75.26:0,75,1314	0/0:12,0:12:36.10:0,36,578
chr10	59080909	.	CT	C	6368.19	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=13.040;DP=664;FS=1.750;HRun=7;HaplotypeScore=68.2347;InbreedingCoeff=0.9697;MQ=68.27;MQ0=0;MQRankSum=0.142;QD=25.99;ReadPosRankSum=1.098;VQSLOD=5.6048;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:38:99:0,108,1319	1/1:0,10:10:24.05:245,24,0	0/0:19,0:16:37.34:0,37,428	0/0:15,1:14:2.01:0,2,279	0/0:25,0:25:66.20:0,66,808	1/1:1,26:27:66.15:673,66,0	1/1:2,27:29:75.17:765,75,0	1/1:5,35:40:99:982,99,0	0/0:22,0:22:63.19:0,63,779	0/0:14,0:14:33.11:0,33,415	0/0:19,0:19:51.15:0,51,630	1/1:0,17:17:51.12:520,51,0	1/1:1,26:27:72.16:735,72,0	0/0:32,0:32:93.25:0,93,1130	0/0:22,0:22:60.18:0,60,744	0/0:26,0:26:75.23:0,75,931	1/1:5,39:44:99:1132,111,0	0/0:34,0:34:99:0,99,1198	0/0:18,0:18:48.14:0,48,590	0/0:20,0:20:60.15:0,60,703	0/0:32,0:32:87.23:0,87,1054	1/1:0,18:18:51.12:520,51,0	1/1:2,11:13:30.06:306,30,0	1/1:0,20:20:48.11:490,48,0	0/0:14,0:14:39.08:0,39,472	0/0:24,0:24:66.20:0,66,819	0/0:34,0:34:99:0,99,1180	0/0:10,0:10:30.10:0,30,377
chr10	59081194	.	TTGTGTGTGTGTGTG	T	833.14	PASS	AB=0.781;AC=13;AF=0.241;AN=54;BaseQRankSum=4.723;DP=542;FS=1.239;HRun=0;HaplotypeScore=201.0832;InbreedingCoeff=0.6141;MQ=60.20;MQ0=13;MQRankSum=-1.751;QD=5.75;ReadPosRankSum=-1.090;VQSLOD=2.3961;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:28:39.11:0,39,1622	0/0:9,0:9:12.04:0,12,401	./.	0/0:13,0:11:0.89:0,1,2	0/0:16,0:16:12.04:0,12,488	1/1:17,0:16:0.94:54,1,0	1/1:20,4:23:2.75:112,3,0	0/0:31,0:29:24.01:0,24,580	0/0:16,0:21:23.11:0,23,512	0/0:16,0:16:21.07:0,21,883	0/0:11,0:12:18.06:0,18,837	0/1:18,7:25:15.46:224,0,15	1/1:19,0:18:2.73:24,3,0	0/0:13,0:13:24.08:0,24,992	0/0:29,0:31:33.58:0,34,1460	0/0:21,0:29:21.07:0,21,992	0/0:19,0:27:21.07:0,21,1007	0/0:7,0:10:18.06:0,18,727	0/0:12,0:10:10.85:0,11,437	0/0:8,0:12:21.06:0,21,819	0/0:33,0:33:27.09:0,27,1291	1/1:6,7:12:8.72:252,9,0	1/1:16,0:18:6.02:195,6,0	1/1:20,8:28:3.01:117,3,0	0/0:19,0:19:12.04:0,12,521	0/0:15,0:15:19.92:0,20,434	0/0:21,0:24:45.13:0,45,1586	0/0:2,0:2:3.01:0,3,138
chr10	59081819	.	G	GA	3497.23	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-11.139;DP=676;FS=15.708;HRun=9;HaplotypeScore=65.8746;InbreedingCoeff=0.9248;MQ=75.21;MQ0=0;MQRankSum=-0.210;QD=24.12;ReadPosRankSum=0.726;VQSLOD=2.9041;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,35:42:93.20:1015,93,0	0/0:8,0:8:14.98:0,15,130	0/0:14,0:15:6.31:0,6,236	0/0:13,0:13:29.83:0,30,248	1/1:8,27:35:6.08:752,6,0	0/0:15,0:15:35.99:0,36,313	0/0:18,0:18:50.99:0,51,442	0/0:34,0:34:89.98:0,90,781	1/1:5,12:17:36.08:389,36,0	0/0:23,0:23:50.97:0,51,443	0/0:23,0:22:56.98:0,57,495	0/0:18,1:20:16.83:0,17,363	0/0:27,0:27:77.97:0,78,677	0/0:27,1:28:41.77:0,42,584	0/0:43,0:43:99:0,102,882	1/1:2,34:36:96.26:1062,96,0	0/0:21,0:21:56.99:0,57,495	1/1:4,10:15:6.85:279,7,0	0/0:23,0:23:56.98:0,57,495	0/0:32,0:33:80.01:0,80,683	0/0:16,0:16:41.98:0,42,365	0/0:20,0:20:50.99:0,51,443	0/0:18,0:21:48.09:0,48,383	0/0:25,0:25:65.92:0,66,562	0/0:24,0:24:62.98:0,63,547	0/0:31,0:31:83.92:0,84,726	0/0:34,0:34:86.97:0,87,755	0/0:16,0:16:38.98:0,39,339
chr10	59083254	.	CA	C	9016.75	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=16.849;DP=657;FS=9.388;HRun=4;HaplotypeScore=61.7034;InbreedingCoeff=1.0000;MQ=83.45;MQ0=0;MQRankSum=-3.104;QD=34.15;ReadPosRankSum=2.533;VQSLOD=5.2413;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,111,1554	0/0:13,0:13:39.12:0,39,528	0/0:21,0:21:57.19:0,57,787	0/0:20,0:20:51.10:0,51,673	0/0:30,0:30:81.27:0,81,1134	0/0:26,0:26:75.24:0,75,1035	0/0:23,0:23:69.22:0,69,950	0/0:33,0:33:93.30:0,93,1286	0/0:19,0:19:57.18:0,57,781	1/1:2,29:31:84.22:982,84,0	1/1:0,25:25:72.22:864,72,0	0/0:21,0:21:60.20:0,60,831	0/0:12,0:12:33.11:0,33,462	1/1:0,20:20:51.16:612,51,0	1/1:0,20:20:60.18:720,60,0	0/0:29,0:29:87.28:0,87,1202	0/0:24,0:24:72.23:0,72,991	0/0:19,0:19:57.15:0,57,776	1/1:0,18:18:54.13:632,54,0	1/1:0,33:33:99:1185,99,0	1/1:0,24:24:66.20:792,66,0	0/0:26,0:26:72.24:0,72,1008	0/0:20,0:20:57.18:0,57,779	0/0:19,0:19:54.18:0,54,756	1/1:0,27:27:78.24:936,78,0	1/1:2,16:18:48.14:567,48,0	1/1:0,29:29:87.27:1044,87,0	1/1:0,19:19:57.17:684,57,0
chr10	59084023	.	GAAA	G	2137.82	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-2.647;DP=644;FS=2.825;HRun=15;HaplotypeScore=108.1294;InbreedingCoeff=0.9695;MQ=61.19;MQ0=13;MQRankSum=0.304;QD=16.44;ReadPosRankSum=5.582;VQSLOD=2.7790;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,37:48:62.89:745,63,0	0/0:3,0:6:12:0,12,156	0/0:43,0:11:12.80:0,13,156	0/0:31,0:12:24.80:0,25,261	1/1:9,13:26:17.78:351,18,0	0/0:17,0:25:54.02:0,54,736	0/0:14,0:14:39.03:0,39,657	0/0:13,0:29:69.76:0,70,631	1/1:4,7:11:20.90:219,21,0	0/0:9,0:31:66.70:0,67,849	0/0:8,0:18:30.56:0,31,403	0/0:15,0:15:35.95:0,36,524	0/0:18,0:18:42.09:0,42,694	0/0:7,0:11:18.06:0,18,259	0/0:9,0:25:30.10:0,30,423	1/1:6,14:23:47.89:493,48,0	0/0:12,1:37:20.66:0,21,356	1/1:3,18:21:45.05:505,45,0	0/0:11,0:20:54.17:0,54,564	0/0:15,0:31:50.32:0,50,557	0/0:2,0:9:12.17:0,12,127	0/0:20,0:21:42.10:0,42,678	0/0:20,0:22:42.12:0,42,714	0/0:10,0:12:27.09:0,27,481	0/0:5,0:21:26.88:0,27,312	0/0:12,0:30:70.80:0,71,798	0/0:5,0:29:45.77:0,46,593	0/0:6,0:10:15.05:0,15,212
chr10	59088770	.	CAAA	C	1141.29	PASS	AB=0.909;AC=11;AF=0.196;AN=56;BaseQRankSum=-4.183;DP=490;FS=1.894;HRun=17;HaplotypeScore=96.8909;InbreedingCoeff=0.7704;MQ=64.96;MQ0=12;MQRankSum=5.685;QD=10.87;ReadPosRankSum=6.218;VQSLOD=0.5543;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,10:16:27.21:290,27,0	0/0:5,0:5:6.02:0,6,85	0/0:55,0:17:20.43:0,20,188	0/0:36,0:15:5.21:0,5,23	1/1:9,11:23:19.72:306,20,0	0/0:10,0:10:11.83:0,12,129	0/0:6,0:6:8.95:0,9,78	0/0:20,0:22:40.86:0,41,351	1/1:4,0:9:8.72:52,9,0	0/0:22,0:26:62.93:0,63,703	0/0:19,0:22:41.90:0,42,482	0/1:9,0:9:2.01:2,0,173	0/0:6,0:5:8.94:0,9,66	0/0:12,0:12:23.97:0,24,266	0/0:9,0:7:9.01:0,9,108	1/1:6,8:16:25.24:197,25,0	0/0:19,0:19:22.47:0,22,171	1/1:11,17:30:37.60:461,38,0	0/0:14,0:14:30:0,30,318	0/0:19,0:20:27.90:0,28,259	0/0:2,0:2:5.34:0,5,28	0/0:5,0:7:10.99:0,11,89	0/0:16,0:17:12.58:0,13,117	0/0:5,0:5:6.86:0,7,63	0/0:13,0:14:17.77:0,18,238	0/0:23,0:24:58.45:0,58,563	0/0:22,0:28:47.79:0,48,579	0/0:16,0:16:19.30:0,19,241
chr10	59088784	.	A	AAAAAAG	6377.02	PASS	AB=0.625;AC=39;AF=0.696;AN=56;BaseQRankSum=-4.509;DP=605;FS=0.472;HRun=0;HaplotypeScore=123.7505;InbreedingCoeff=0.6680;MQ=55.55;MQ0=18;MQRankSum=-3.372;QD=16.56;ReadPosRankSum=-3.941;VQSLOD=3.0905;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:39.02:0,39,530	1/1:2,0:9:8.92:125,9,0	0/0:63,0:13:0.16:0,0,86	0/0:56,0:19:2.51:0,3,29	0/0:28,0:28:60.61:0,61,654	1/1:4,0:19:14.70:295,15,0	0/1:4,0:14:2.63:66,0,3	1/1:28,0:26:51.25:554,51,0	0/0:10,0:10:17.99:0,18,198	1/1:24,0:25:41.52:587,42,0	1/1:10,2:32:66.36:910,66,0	1/1:18,0:16:31.89:190,32,0	1/1:15,0:13:29.66:263,30,0	0/1:8,0:15:9.17:46,0,9	1/1:2,1:12:9.03:176,9,0	0/0:15,0:15:27.02:0,27,399	1/1:21,0:19:32.35:307,32,0	0/0:30,0:29:64.28:0,64,769	1/1:8,0:15:26.44:234,26,0	1/1:3,10:21:38.59:475,39,0	1/1:2,0:2:0.89:2,1,0	1/1:3,0:17:9.64:146,10,0	1/1:5,0:18:9.50:224,10,0	0/1:3,0:8:2.85:51,0,3	1/1:9,0:23:25.23:218,25,0	1/1:24,0:24:47.95:479,48,0	1/1:30,0:28:59.95:577,60,0	1/1:2,10:15:19.64:450,20,0
chr10	59090002	.	C	CT	3868.98	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-11.769;DP=681;FS=6.390;HRun=6;HaplotypeScore=73.6597;InbreedingCoeff=0.9997;MQ=85.20;MQ0=0;MQRankSum=-2.128;QD=30.71;ReadPosRankSum=3.246;VQSLOD=4.3561;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,15:19:42.10:512,42,0	0/0:17,0:17:48.11:0,48,489	0/0:27,0:27:72.14:0,72,724	0/0:17,0:17:35.83:0,36,336	1/1:2,19:21:48.15:604,48,0	0/0:29,0:29:69.14:0,69,703	0/0:18,0:18:42.09:0,42,428	0/0:38,0:38:84.15:0,84,847	1/1:2,30:32:78.25:981,78,0	0/0:25,0:25:63.14:0,63,643	0/0:11,0:11:27.06:0,27,275	0/0:40,0:40:93.19:0,93,948	0/0:27,0:27:57.59:0,58,581	0/0:20,0:20:54.12:0,54,550	0/0:37,0:37:99:0,105,1069	1/1:2,34:36:93.30:1169,93,0	0/0:25,0:25:72.15:0,72,728	1/1:1,17:18:48.15:604,48,0	0/0:18,0:18:45.08:0,45,448	0/0:23,0:23:63.09:0,63,625	0/0:20,0:20:51.11:0,51,520	0/0:18,0:18:39.08:0,39,398	0/0:24,0:24:66.15:0,66,673	0/0:27,0:27:78.17:0,78,795	0/0:21,0:21:48.09:0,48,485	0/0:18,0:18:42.08:0,42,423	0/0:37,0:37:96.20:0,96,970	0/0:18,0:18:48.04:0,48,465
chr10	59091404	.	C	CACACACACACACACACACAT	7736.97	PASS	AB=0.936;AC=24;AF=0.429;AN=56;BaseQRankSum=2.991;DP=641;FS=3.166;HRun=0;HaplotypeScore=288.3727;InbreedingCoeff=0.5639;MQ=61.65;MQ0=4;MQRankSum=-6.483;QD=23.81;ReadPosRankSum=-2.648;VQSLOD=3.3043;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:39,0:39:99:111,0,162	1/1:11,0:11:11.76:436,12,0	0/0:43,0:22:40.82:0,41,663	0/0:36,0:19:12.10:0,12,579	0/1:33,0:33:54.85:254,0,55	1/1:17,0:16:17.64:263,18,0	1/1:25,0:24:29.45:411,29,0	1/1:28,0:26:68.72:1433,69,0	0/1:24,0:23:24.14:1073,0,24	0/0:37,0:37:90.46:0,90,2734	0/0:22,0:22:38.43:0,38,2108	1/1:9,9:24:6.02:476,6,0	1/1:13,0:13:20.98:470,21,0	0/0:15,0:15:42.07:0,42,1305	0/0:13,0:13:39.10:0,39,1791	0/1:14,0:14:28.86:403,0,29	1/1:5,0:21:15.05:1209,15,0	0/1:20,0:20:99:460,0,133	0/0:25,0:25:63.89:0,64,1197	0/0:24,0:24:63.08:0,63,1548	0/0:21,0:21:51.03:0,51,1346	1/1:17,0:15:17.67:246,18,0	0/1:6,0:16:0.17:1,0,0	1/1:6,0:23:6.49:491,6,0	0/0:33,0:32:80.38:0,80,2968	0/0:22,0:22:54.13:0,54,1639	0/0:19,0:19:51.69:0,52,2014	0/0:6,0:6:15:0,15,619
chr10	59092791	.	AAATGAATGAATGAATG	A	10260.59	PASS	AB=0.735;AC=44;AF=0.846;AN=52;BaseQRankSum=4.932;DP=489;FS=4.235;HRun=0;HaplotypeScore=219.4905;InbreedingCoeff=-0.2210;MQ=51.45;MQ0=3;MQRankSum=-3.774;QD=22.02;ReadPosRankSum=-2.038;VQSLOD=3.4632;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:12,0:21:42.03:82,0,42	1/1:7,4:11:9.03:392,9,0	./.	./.	0/1:25,0:30:99:126,0,211	1/1:5,0:15:18.05:189,18,0	0/1:11,0:19:52.96:85,0,53	1/1:24,0:22:9.02:131,9,0	0/1:16,0:20:96.44:96,0,273	1/1:8,9:17:27.09:1007,27,0	1/1:12,5:17:15.05:562,15,0	1/1:9,0:21:27.07:285,27,0	0/1:10,0:15:13.11:83,0,13	1/1:11,8:19:18.06:727,18,0	1/1:18,10:28:15.05:654,15,0	0/1:5,1:16:99:351,0,101	1/1:8,4:13:8.99:208,9,0	1/1:15,0:17:6.02:63,6,0	1/1:11,4:12:12.04:392,12,0	1/1:11,7:18:21.07:860,21,0	1/1:12,3:15:3.01:110,3,0	0/1:11,0:15:48.21:48,0,158	0/1:7,0:15:74.08:74,0,121	1/1:11,0:13:3.48:33,3,0	1/1:10,10:20:21.07:915,21,0	1/1:12,9:21:27.09:1088,27,0	1/1:6,15:21:30.10:1307,30,0	1/1:7,3:10:9.03:392,9,0
chr10	59092890	.	TACACACACACACACACACACACACAC	T	4232.27	PASS	AB=0.964;AC=11;AF=0.196;AN=56;BaseQRankSum=4.887;DP=502;FS=3.904;HRun=0;HaplotypeScore=272.9235;InbreedingCoeff=0.7277;MQ=52.90;MQ0=21;MQRankSum=-3.463;QD=37.45;ReadPosRankSum=3.121;VQSLOD=3.5137;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:15,1:14:15.01:415,15,0	0/0:8,0:8:11.16:0,11,860	0/0:22,0:11:3.01:0,3,111	0/0:35,0:18:27.08:0,27,1092	1/1:9,15:24:11.73:500,12,0	0/0:19,0:20:21.53:0,22,1560	0/0:27,0:26:33.11:0,33,2105	0/0:19,0:15:24.08:0,24,1277	1/1:8,12:20:24.97:1634,25,0	0/0:12,0:11:24.08:0,24,1760	0/0:12,0:11:3.01:0,3,96	0/0:21,0:20:27.07:0,27,1923	0/0:10,0:9:9.50:0,10,770	0/0:17,0:17:24.06:0,24,1572	0/1:26,1:26:99:159,0,3437	1/1:12,7:19:24.08:1501,24,0	0/0:21,0:21:38.80:0,39,2262	1/1:7,0:7:2.99:23,3,0	0/0:18,0:17:30.09:0,30,2104	0/0:8,0:8:12.04:0,12,920	0/0:26,0:23:21.07:0,21,1752	0/0:16,0:16:29.92:0,30,2285	0/0:11,0:11:15.51:0,16,780	0/0:22,0:22:30.57:0,31,2192	0/0:16,0:17:21.93:0,22,1379	0/0:16,0:14:42.14:0,42,3379	0/0:26,0:26:45.15:0,45,2935	0/0:3,0:4:9.03:0,9,764
chr10	59093089	.	G	GA	2725.51	PASS	AB=0.735;AC=18;AF=0.321;AN=56;BaseQRankSum=-3.236;DP=603;FS=7.049;HRun=13;HaplotypeScore=116.2509;InbreedingCoeff=0.5202;MQ=66.59;MQ0=7;MQRankSum=-0.526;QD=12.33;ReadPosRankSum=0.054;VQSLOD=2.6826;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,1:37:7.68:0,8,370	0/0:11,0:11:29.66:0,30,200	0/0:43,0:21:6.20:0,6,64	0/0:41,0:21:12.73:0,13,87	0/0:28,0:30:23.62:0,24,349	0/0:15,0:16:34.59:0,35,224	0/0:14,0:15:39.79:0,40,248	0/0:30,0:30:52.27:0,52,337	0/0:9,0:9:11.85:0,12,82	1/1:7,13:20:39.98:383,40,0	0/1:13,4:18:25.55:166,0,26	0/0:22,0:24:24.91:0,25,303	0/0:14,0:14:24.37:0,24,161	1/1:12,4:16:35.77:299,36,0	0/1:7,12:20:0.12:301,0,0	0/0:14,0:15:3.50:0,4,151	0/0:35,3:39:38.74:0,39,554	0/1:11,1:13:9.16:9,0,72	0/1:12,5:16:10.80:174,0,11	0/1:6,13:19:3.57:238,0,4	1/1:2,10:12:9.01:84,9,0	0/0:18,2:21:4.34:0,4,163	0/0:16,1:18:9.83:0,10,202	0/0:16,0:16:36.71:0,37,237	0/1:15,10:25:6.54:346,0,7	1/1:4,24:28:46.80:556,47,0	1/1:9,14:24:24.03:223,24,0	1/1:1,6:8:11.18:133,11,0
chr10	59093196	.	AGT	A	10174.55	PASS	AB=0.890;AC=47;AF=0.839;AN=56;BaseQRankSum=7.334;DP=757;FS=15.563;HRun=0;HaplotypeScore=121.2630;InbreedingCoeff=0.4814;MQ=62.40;MQ0=15;MQRankSum=2.746;QD=15.39;ReadPosRankSum=2.311;VQSLOD=4.0353;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:14,0:23:2.34:94,0,2	0/1:7,0:7:22.80:23,0,126	0/0:24,0:11:3.01:0,3,41	0/0:33,0:15:9.02:0,9,110	1/1:15,0:23:20.77:100,21,0	1/1:6,22:29:50.98:571,51,0	1/1:7,7:16:29.75:307,30,0	0/1:37,2:37:21.50:21,0,596	1/1:9,0:19:37.09:193,37,0	1/1:14,24:38:75.21:860,75,0	1/1:5,12:17:24.50:264,25,0	1/1:14,14:30:16:608,16,0	1/1:16,9:24:32.90:354,33,0	1/1:10,13:26:50.65:530,51,0	1/1:6,32:40:92.94:1038,93,0	1/1:15,0:28:41.02:199,41,0	0/0:37,2:39:6.67:0,7,1085	1/1:7,0:14:29.74:145,30,0	1/1:19,9:24:27.08:313,27,0	1/1:10,13:23:33.07:369,33,0	1/1:13,24:42:83.58:890,84,0	1/1:11,12:25:0.96:434,1,0	1/1:9,8:17:35.43:372,35,0	1/1:17,19:36:19.18:663,19,0	1/1:11,12:23:21.06:244,21,0	1/1:25,16:43:80.56:856,81,0	1/1:16,10:27:41.22:434,41,0	1/1:9,8:18:26.91:293,27,0
chr10	59093281	.	CTG	C	9468.69	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=11.559;DP=930;FS=9.514;HRun=0;HaplotypeScore=138.4645;InbreedingCoeff=0.9664;MQ=58.88;MQ0=22;MQRankSum=0.102;QD=21.04;ReadPosRankSum=6.221;VQSLOD=4.7637;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,34:37:57.17:725,57,0	1/1:4,12:16:30.51:383,31,0	0/0:53,0:16:24.07:0,24,270	0/0:73,0:27:23:0,23,264	1/1:2,20:22:27.09:344,27,0	1/1:12,18:30:57.18:723,57,0	1/1:19,6:25:1.52:510,2,0	1/1:17,6:22:13.85:369,14,0	1/1:3,24:26:48.15:610,48,0	0/0:32,0:32:81.06:0,81,1285	0/0:22,0:22:39.13:0,39,643	1/1:12,22:34:51.11:615,51,0	1/1:9,24:30:53.98:663,54,0	0/0:35,0:35:81.24:0,81,1288	0/0:44,0:44:84.22:0,84,1287	1/1:6,23:28:45.03:573,45,0	1/1:11,22:33:75.22:937,75,0	1/1:5,35:39:78.25:992,78,0	0/0:25,0:23:63.21:0,63,1028	0/0:18,0:18:41.72:0,42,637	0/0:75,1:76:99:0,100,2387	1/1:10,14:23:41.98:519,42,0	1/1:8,22:29:23.61:338,24,0	1/1:19,28:45:96.25:1167,96,0	0/0:22,0:22:45.14:0,45,725	0/0:31,0:31:81.27:0,81,1298	0/0:27,0:27:72.03:0,72,1161	0/0:21,0:21:60.20:0,60,971
chr10	59093329	.	C	CTG	8403.98	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-2.547;DP=1030;FS=8.715;HRun=0;HaplotypeScore=140.5785;InbreedingCoeff=0.9993;MQ=54.31;MQ0=47;MQRankSum=3.350;QD=24.86;ReadPosRankSum=-2.906;VQSLOD=4.7429;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,1:43:75.24:0,75,972	1/1:8,8:16:32.54:497,33,0	0/0:62,0:14:36.56:0,37,413	0/0:76,0:21:30.11:0,30,367	0/0:17,0:17:30.10:0,30,390	1/1:12,8:20:29.85:396,30,0	1/1:4,24:27:44.98:765,45,0	1/1:15,49:46:67.79:1600,68,0	0/0:29,0:28:60.19:0,60,778	0/0:33,0:31:84.16:0,84,1004	0/0:14,0:14:41.95:0,42,502	1/1:11,27:38:57.19:957,57,0	1/1:6,28:32:68.74:1059,69,0	0/0:41,0:41:99:0,114,1434	0/0:44,0:44:96.28:0,96,1216	0/0:29,0:29:66.06:0,66,823	1/1:22,19:41:77.65:1122,78,0	0/0:50,0:48:99:0,123,1536	0/0:27,0:20:54.16:0,54,685	0/0:17,0:16:39.13:0,39,506	0/0:89,0:86:99:0,186,2333	1/1:5,18:22:30.10:510,30,0	1/1:12,8:18:24.08:371,24,0	1/1:21,32:53:72.20:1126,72,0	0/0:28,0:28:63.17:0,63,802	0/0:45,0:43:87.39:0,87,1359	0/0:32,0:32:81.25:0,81,1037	0/0:15,0:15:41.96:0,42,455
chr10	59093373	.	CTG	C	1878.14	PASS	AB=0.929;AC=7;AF=0.125;AN=56;BaseQRankSum=6.218;DP=1079;FS=0.000;HRun=0;HaplotypeScore=160.7750;InbreedingCoeff=0.7765;MQ=56.88;MQ0=49;MQRankSum=0.608;QD=18.06;ReadPosRankSum=-1.912;VQSLOD=3.1065;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,2:36:1.88:0,2,1045	1/1:5,8:13:30.08:367,30,0	0/0:65,0:17:47.56:0,48,576	0/0:70,0:21:39.78:0,40,441	0/0:25,0:24:63.21:0,63,1009	0/0:25,0:25:57.19:0,57,933	0/0:38,0:37:6.71:0,7,1258	1/1:18,8:18:25.49:338,25,0	0/0:33,0:33:72.25:0,72,1181	0/0:35,0:34:90.31:0,90,1477	0/1:12,1:13:8.11:8,0,369	0/0:39,0:38:90.29:0,90,1469	0/0:37,0:37:90.27:0,90,1443	0/0:45,0:45:99:0,114,1824	0/0:59,0:58:99:0,138,2206	0/0:31,1:32:40.07:0,40,1176	1/1:17,35:52:99:1310,111,0	0/0:48,0:48:96.21:0,96,1752	0/0:30,0:23:57.11:0,57,827	0/0:18,0:18:30.10:0,30,494	0/0:99,0:98:99:0,192,2950	0/0:33,0:32:72.25:0,72,1180	0/0:19,1:19:51.13:0,51,829	0/0:53,3:55:99:0,117,1798	0/0:33,0:33:66.12:0,66,1042	0/0:49,0:48:99:0,129,2040	0/0:35,0:34:69.15:0,69,1075	0/0:12,0:12:33.11:0,33,526
chr10	59093436	.	T	TGC	9999.18	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-15.735;DP=905;FS=10.794;HRun=0;HaplotypeScore=114.2430;InbreedingCoeff=0.9543;MQ=60.26;MQ0=17;MQRankSum=0.577;QD=27.93;ReadPosRankSum=2.686;VQSLOD=6.3245;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:87.18:0,87,1092	0/0:15,0:15:39.08:0,39,472	0/0:31,0:11:6.21:0,6,154	0/0:29,0:12:14.53:0,15,155	0/0:33,0:33:89.84:0,90,1121	0/0:39,0:39:67.99:0,68,1080	0/0:37,0:37:99:0,99,1200	0/0:35,0:34:51.04:0,51,555	0/0:27,0:27:66.06:0,66,789	1/1:8,35:42:87.13:1531,87,0	1/1:3,12:15:13.15:449,13,0	0/0:42,0:41:83.74:0,84,1051	0/0:28,0:28:60.06:0,60,725	1/1:7,29:36:43.75:969,44,0	1/1:14,33:44:44.12:919,44,0	0/0:29,0:28:54.07:0,54,635	0/0:41,0:41:99:0,99,1198	0/0:30,0:30:72.16:0,72,892	1/1:3,21:23:57:838,57,0	1/1:2,16:18:33.11:553,33,0	1/1:16,64:81:99:2169,126,0	0/0:35,0:35:78.21:0,78,991	0/0:22,0:22:60.17:0,60,765	0/0:41,0:41:90.70:0,91,1145	1/1:6,22:27:27.15:659,27,0	1/1:3,29:32:83.94:1245,84,0	1/1:4,18:22:36.02:616,36,0	1/1:4,4:8:3.01:52,3,0
chr10	59093738	.	G	GA	7744.70	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-12.943;DP=819;FS=7.284;HRun=6;HaplotypeScore=87.8364;InbreedingCoeff=1.0000;MQ=70.23;MQ0=2;MQRankSum=-1.566;QD=29.90;ReadPosRankSum=1.480;VQSLOD=5.2407;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,108,1069	0/0:14,0:14:39.07:0,39,389	0/0:35,0:29:68.28:0,68,652	0/0:20,0:17:42.05:0,42,418	0/0:28,0:28:72.16:0,72,733	1/1:3,25:28:72.16:886,72,0	1/1:4,26:30:72.23:906,72,0	0/0:37,0:37:99:0,102,1024	0/0:22,0:22:63.14:0,63,643	0/0:30,0:30:75.16:0,75,765	0/0:27,0:27:75.15:0,75,758	1/1:3,33:36:90.15:1093,90,0	1/1:2,43:46:99:1371,111,0	0/0:22,0:22:63.11:0,63,629	0/0:38,0:38:99:0,105,1064	0/0:29,0:29:69.14:0,69,698	0/0:25,0:25:51.06:0,51,508	0/0:24,0:24:69.10:0,69,691	0/0:28,0:28:72.14:0,72,727	0/0:21,0:21:45.09:0,45,453	0/0:34,0:34:93.20:0,93,948	1/1:2,34:36:90.13:1075,90,0	1/1:3,28:30:75.09:888,75,0	1/1:6,46:52:99:1527,123,0	0/0:20,0:20:54.12:0,54,551	0/0:25,0:25:66.15:0,66,673	0/0:28,0:28:81.16:0,81,818	0/0:12,0:12:36.08:0,36,367
chr10	59095334	.	A	AG	8813.34	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-5.577;DP=645;FS=9.968;HRun=1;HaplotypeScore=80.9653;InbreedingCoeff=0.9953;MQ=91.52;MQ0=0;MQRankSum=-1.286;QD=39.52;ReadPosRankSum=0.437;VQSLOD=4.8209;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:78.25:0,78,1008	1/1:0,11:11:29.90:449,30,0	0/0:28,0:28:66.25:0,66,948	0/0:23,0:23:52.73:0,53,785	0/0:29,0:29:84.26:0,84,1077	1/1:0,33:33:93.32:1394,93,0	1/1:1,13:14:39.13:585,39,0	1/1:0,28:28:81.24:1172,81,0	0/0:20,0:20:57.17:0,57,725	0/0:20,0:20:60.19:0,60,777	0/0:30,0:30:84.27:0,84,1090	1/1:0,19:19:48.16:719,48,0	1/1:1,28:29:72.24:1079,72,0	0/0:11,0:11:33.11:0,33,429	0/0:27,0:27:78.25:0,78,1013	0/0:27,0:27:81.26:0,81,1052	1/1:0,15:15:36.12:539,36,0	0/0:22,0:22:63.20:0,63,817	0/0:24,0:24:72.23:0,72,935	0/0:29,0:29:84.27:0,84,1090	0/0:4,0:4:12.04:0,12,155	1/1:1,32:33:90.30:1349,90,0	1/1:0,25:25:63.21:944,63,0	1/1:1,15:16:39.13:585,39,0	0/0:23,0:23:66.20:0,66,842	0/0:30,0:30:90.28:0,90,1157	0/0:36,0:35:99:0,105,1363	0/0:12,0:12:36.12:0,36,467
chr10	59095937	.	G	GA	5120.36	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-13.760;DP=505;FS=3.232;HRun=9;HaplotypeScore=64.6810;InbreedingCoeff=0.8768;MQ=81.78;MQ0=0;MQRankSum=-0.100;QD=25.22;ReadPosRankSum=-1.262;VQSLOD=5.1710;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:74.96:0,75,646	0/0:2,0:7:10.18:0,10,30	0/0:26,0:22:2.48:0,2,232	0/0:14,0:15:7.13:0,7,101	0/0:24,0:24:31.57:0,32,466	0/0:2,0:12:20.37:0,20,60	0/0:7,0:18:20.37:0,20,60	0/0:3,0:30:38.19:0,38,124	0/0:14,0:14:41.98:0,42,361	1/1:5,20:25:38.36:640,38,0	1/1:4,13:17:39.11:430,39,0	0/0:4,0:19:24.44:0,24,72	0/0:6,0:15:18.33:0,18,54	1/1:3,9:12:1.02:239,1,0	1/1:4,10:14:1.02:239,1,0	0/0:19,0:19:29.71:0,30,391	0/0:2,0:20:27.22:0,27,87	0/0:18,0:18:41.98:0,42,364	1/1:5,25:30:61.15:889,61,0	1/1:3,12:16:36.09:394,36,0	1/1:0,5:5:12.03:133,12,0	0/0:0,0:10:16.56:0,17,51	0/0:0,0:13:26.48:0,26,78	0/0:1,0:11:18.33:0,18,54	1/1:4,21:25:63.17:697,63,0	1/1:7,15:22:22.06:463,22,0	1/1:6,18:24:51.14:564,51,0	1/1:0,13:13:39.11:431,39,0
chr10	59101307	.	CTT	C	2213.73	PASS	AC=20;AF=0.370;AN=54;BaseQRankSum=-5.293;DP=365;FS=4.711;HRun=13;HaplotypeScore=67.2153;InbreedingCoeff=0.8936;MQ=53.88;MQ0=6;MQRankSum=4.207;QD=18.45;ReadPosRankSum=3.797;VQSLOD=3.0973;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:27.07:0,27,371	1/1:0,3:3:5.98:58,6,0	0/0:7,0:5:6.02:0,6,85	./.	0/0:28,0:27:45.05:0,45,584	1/1:1,23:24:66.10:639,66,0	1/1:2,3:5:9.01:87,9,0	1/1:6,23:28:69.07:669,69,0	0/0:7,0:7:15.01:0,15,192	0/0:11,0:16:42.05:0,42,437	0/0:10,0:21:48.06:0,48,502	1/1:3,7:10:21.01:204,21,0	1/1:3,2:5:6:58,6,0	0/0:7,0:10:20.97:0,21,190	0/0:5,0:9:18.03:0,18,186	0/0:14,0:17:35.01:0,35,404	1/1:10,13:23:41.51:373,42,0	0/0:15,0:12:24.02:0,24,289	0/0:8,0:12:30.02:0,30,321	0/0:5,0:15:39.07:0,39,390	0/0:5,0:6:3:0,3,29	1/1:4,3:7:8.94:78,9,0	1/1:0,6:6:15.01:145,15,0	1/1:3,3:6:11.96:107,12,0	0/0:12,0:17:36.05:0,36,388	0/0:15,0:16:30.05:0,30,331	0/0:16,0:24:48.07:0,48,496	0/0:1,0:6:18:0,18,173
chr10	59101324	.	GATTT	G	2855.27	PASS	AB=0.792;AC=21;AF=0.389;AN=54;BaseQRankSum=2.903;DP=331;FS=7.135;HRun=0;HaplotypeScore=73.2899;InbreedingCoeff=0.7605;MQ=41.21;MQ0=41;MQRankSum=-8.418;QD=19.42;ReadPosRankSum=-2.929;VQSLOD=1.3581;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:11:27.09:0,27,652	0/0:2,0:2:6.02:0,6,152	0/0:3,0:2:3.01:0,3,56	./.	0/0:16,0:15:27.09:0,27,597	0/0:26,0:24:51.13:0,51,1235	0/0:6,0:4:12.03:0,12,253	0/0:36,0:29:69.24:0,69,1716	0/0:6,0:6:12.04:0,12,269	0/1:14,5:16:61.15:193,0,61	1/1:8,8:16:18.06:309,18,0	0/0:7,0:7:12.03:0,12,253	0/0:3,0:3:6.02:0,6,132	1/1:3,6:9:18.06:310,18,0	1/1:4,5:8:15.05:257,15,0	0/0:9,0:9:21.07:0,21,529	0/0:25,0:18:42.11:0,42,954	0/0:18,0:9:21.03:0,21,477	1/1:6,9:12:21.04:332,21,0	1/1:6,8:14:18.06:310,18,0	1/1:4,2:3:3.01:48,3,0	0/0:2,0:2:3:0,3,26	0/0:8,0:6:15.05:0,15,364	0/0:4,0:4:3.01:0,3,76	1/1:2,13:15:27.09:458,27,0	1/1:8,7:11:18.02:281,18,0	1/1:12,9:21:21.07:365,21,0	1/1:5,3:5:12.04:192,12,0
chr10	59102082	.	A	ACTCGG	32935.68	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=-10.890;DP=616;FS=2.510;HRun=0;HaplotypeScore=113.9656;InbreedingCoeff=0.9976;MQ=65.80;MQ0=0;MQRankSum=-7.277;QD=74.01;ReadPosRankSum=1.756;VQSLOD=6.7171;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:90.31:0,90,2051	1/1:3,5:9:24:578,24,0	0/0:21,0:19:45.13:0,45,919	0/0:34,0:32:62.28:0,62,1623	0/0:17,0:17:45.15:0,45,1028	1/1:2,24:26:66.18:2005,66,0	1/1:3,15:18:42.14:1331,42,0	1/1:4,14:22:51.16:1440,51,0	0/0:22,0:22:66.21:0,66,1487	1/1:0,11:16:45.14:1265,45,0	1/1:2,14:17:25.54:896,26,0	1/1:3,14:19:48.16:1597,48,0	1/1:3,12:16:39.09:1182,39,0	1/1:2,15:19:51.17:1619,51,0	1/1:4,27:32:69.71:2208,70,0	0/0:28,0:28:84.27:0,84,1892	1/1:1,19:23:54.19:1787,54,0	0/0:18,0:18:27.87:0,28,1138	1/1:2,10:13:39.13:1202,39,0	1/1:1,11:13:33.07:1017,33,0	1/1:1,31:39:84.72:2715,85,0	1/1:1,19:20:42.14:1357,42,0	1/1:0,18:20:33.11:1096,33,0	1/1:1,24:27:51.65:1698,52,0	1/1:1,14:17:39.13:1275,39,0	1/1:2,26:29:84.29:2710,84,0	1/1:4,34:42:99:3439,108,0	1/1:2,5:8:18.03:520,18,0
chr10	59104948	.	ATAG	A	6511.52	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=14.458;DP=575;FS=5.711;HRun=0;HaplotypeScore=90.5805;InbreedingCoeff=0.9957;MQ=77.77;MQ0=0;MQRankSum=-4.592;QD=33.91;ReadPosRankSum=1.687;VQSLOD=5.3642;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:93.29:0,93,2046	1/1:0,10:10:30.10:499,30,0	0/0:7,0:7:18.06:0,18,329	0/0:23,0:23:39.38:0,39,910	0/0:23,0:23:69.24:0,69,1517	1/1:2,21:23:42.14:686,42,0	1/1:2,17:19:45.07:675,45,0	1/1:2,28:30:78.17:1163,78,0	0/0:17,0:17:42.14:0,42,951	0/0:26,0:26:78.27:0,78,1745	0/0:24,0:24:72.25:0,72,1606	1/1:1,20:21:54.18:898,54,0	1/1:0,24:22:42.14:698,42,0	0/0:28,0:28:69.22:0,69,1427	0/0:24,0:24:57.20:0,57,1290	0/0:18,0:18:51.17:0,51,1101	1/1:2,15:17:23.50:369,24,0	0/0:10,0:10:27.09:0,27,587	0/0:19,0:19:48:0,48,1012	0/0:20,0:20:60.21:0,60,1317	0/0:26,0:26:75.24:0,75,1609	1/1:1,11:12:29.61:456,30,0	1/1:1,14:15:14.90:217,15,0	1/1:0,21:21:51.17:849,51,0	0/0:14,0:14:42.14:0,42,951	0/0:26,0:26:75.24:0,75,1653	0/0:26,0:26:72.25:0,72,1585	0/0:20,0:20:60.21:0,60,1326
chr10	59105082	.	CT	C	1381.31	PASS	AB=0.933;AC=23;AF=0.411;AN=56;BaseQRankSum=-4.738;DP=498;FS=6.331;HRun=13;HaplotypeScore=79.2315;InbreedingCoeff=0.3576;MQ=52.61;MQ0=10;MQRankSum=3.370;QD=5.06;ReadPosRankSum=4.527;VQSLOD=2.1093;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:1.83:0,2,12	0/0:4,0:4:1.36:0,1,3	0/0:23,0:5:10.09:0,10,69	0/0:25,0:8:16.86:0,17,104	0/0:18,0:18:7.05:0,7,31	0/0:17,0:17:10.09:0,10,39	0/0:19,0:19:11.16:0,11,49	0/1:24,0:24:5.59:6,0,16	1/1:13,0:13:0.36:1,0,0	0/1:20,0:20:9.49:70,0,9	1/1:14,2:16:0.48:133,0,0	0/1:29,0:29:9.62:10,0,15	0/0:19,0:18:0.47:0,0,1	1/1:13,1:14:18.50:131,19,0	1/1:12,2:13:23.95:135,24,0	0/0:19,0:19:5.41:0,5,13	0/0:18,0:16:3.34:0,3,18	0/0:10,0:10:1.36:0,1,3	0/1:19,9:27:22.90:198,0,23	1/1:18,1:18:23.82:197,24,0	1/1:4,0:4:8.94:65,9,0	0/0:8,0:8:2.42:0,2,14	0/0:12,0:11:5.79:0,6,36	0/0:8,0:8:4.21:0,4,14	1/1:9,14:23:12.19:87,12,0	1/1:22,2:24:8.73:168,9,0	0/1:35,4:39:48.14:293,0,48	1/1:6,0:5:8.78:54,9,0
chr10	59105095	.	TC	T	4732.14	PASS	AB=0.978;AC=48;AF=0.857;AN=56;BaseQRankSum=-0.942;DP=490;FS=2.287;HRun=1;HaplotypeScore=71.2630;InbreedingCoeff=0.2980;MQ=48.05;MQ0=19;MQRankSum=-3.413;QD=11.06;ReadPosRankSum=1.259;VQSLOD=2.9906;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:29:73.46:532,73,0	1/1:3,0:3:8.12:46,8,0	0/0:29,1:5:3.17:0,3,69	0/0:32,0:8:6.68:0,7,89	1/1:20,0:20:50.11:366,50,0	1/1:18,0:18:40.05:268,40,0	1/1:15,0:15:43.21:319,43,0	1/1:22,2:24:58.33:447,58,0	1/1:13,0:13:32.42:253,32,0	1/1:14,0:14:12.10:76,12,0	0/1:14,1:15:4.53:83,0,5	1/1:26,0:25:46.36:401,46,0	1/1:14,0:13:11.94:93,12,0	1/1:17,0:17:31.40:179,31,0	1/1:13,0:12:8.83:60,9,0	1/1:17,0:17:47.63:361,48,0	1/1:13,1:11:27.58:210,28,0	1/1:9,0:9:20.52:149,21,0	0/1:24,0:23:60.23:60,0,71	1/1:22,0:21:11.74:113,12,0	0/1:5,0:5:3.80:7,0,4	1/1:8,0:8:17.09:111,17,0	1/1:11,0:10:22.58:150,23,0	1/1:8,0:8:11.54:73,12,0	1/1:21,0:21:1.94:71,2,0	1/1:23,1:24:23.07:163,23,0	0/1:36,1:37:14.60:109,0,15	1/1:6,0:4:8.02:33,8,0
chr10	59105096	.	C	CT	1155.16	PASS	AB=0.989;AC=37;AF=0.661;AN=56;BaseQRankSum=-3.634;DP=493;FS=5.260;HRun=14;HaplotypeScore=88.2013;InbreedingCoeff=0.3997;MQ=45.00;MQ0=19;MQRankSum=2.754;QD=2.86;ReadPosRankSum=-1.117;VQSLOD=0.2943;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:29:1.22:1,0,1	0/0:3,0:3:0.46:0,0,2	0/0:28,0:4:5.75:0,6,32	0/0:31,0:7:3.41:0,3,21	1/1:19,0:19:2.83:6,3,0	0/1:18,0:18:3.96:17,0,4	1/1:16,0:16:4.19:14,4,0	1/1:24,0:24:7.05:19,7,0	0/1:13,0:13:0.90:1,0,1	1/1:16,0:16:11.27:123,11,0	1/1:14,2:16:3.23:123,3,0	1/1:26,0:25:1.41:4,1,0	0/1:14,0:13:0:0,0,0	1/1:14,4:18:34.35:205,34,0	0/1:11,1:11:4.02:61,0,4	1/1:16,0:16:5.56:20,6,0	1/1:14,0:11:0.47:1,0,0	0/1:9,0:9:0:0,0,0	1/1:25,0:25:2.56:95,3,0	1/1:20,1:22:7.78:102,8,0	0/1:4,0:4:0:0,0,0	0/0:8,0:8:3.99:0,4,12	0/0:11,0:10:2.07:0,2,14	0/0:8,0:8:3.21:0,3,10	1/1:20,1:21:15.31:111,15,0	1/1:22,4:26:22.48:154,22,0	1/1:32,4:37:29.29:165,29,0	1/1:6,0:4:8.90:61,9,0
chr10	59105107	.	T	TCTC	1902.40	PASS	AB=0.884;AC=15;AF=0.268;AN=56;BaseQRankSum=-2.996;DP=469;FS=9.748;HRun=0;HaplotypeScore=136.9813;InbreedingCoeff=0.5155;MQ=37.58;MQ0=20;MQRankSum=-1.439;QD=13.49;ReadPosRankSum=3.316;VQSLOD=2.6506;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:17:38.50:0,39,391	0/1:5,0:5:5.10:99,0,5	0/0:24,0:2:6.02:0,6,104	0/0:28,0:6:8.92:0,9,84	0/0:19,0:19:27.51:0,28,222	1/1:20,0:20:4.60:290,5,0	0/1:9,1:10:42.14:240,0,42	0/1:16,16:31:7.74:708,0,8	0/0:10,0:10:23.68:0,24,231	0/0:22,0:22:50.99:0,51,613	0/0:16,0:16:39:0,39,478	1/1:19,0:18:4.77:189,5,0	1/1:5,9:15:8.58:52,9,0	0/0:20,0:20:56.98:0,57,697	0/0:17,0:16:38.98:0,39,467	0/0:9,0:9:18.37:0,18,154	0/1:10,1:8:3.57:107,0,4	0/0:7,0:7:19.86:0,20,212	0/0:21,0:21:49.88:0,50,514	0/0:22,0:22:62.82:0,63,709	0/0:5,0:5:9.02:0,9,103	1/1:5,1:6:12.03:144,12,0	0/1:12,1:11:8.90:105,0,9	1/1:9,1:10:10.49:138,10,0	0/0:20,0:20:33.06:0,33,405	0/0:22,0:22:53.69:0,54,640	0/0:35,0:35:84.29:0,84,927	0/0:13,0:11:27.97:0,28,403
chr10	59105426	.	TC	T	4822.55	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=9.759;DP=609;FS=2.759;HRun=1;HaplotypeScore=62.7430;InbreedingCoeff=0.9988;MQ=61.74;MQ0=0;MQRankSum=1.599;QD=40.19;ReadPosRankSum=1.888;VQSLOD=5.5897;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,46:46:99:1930,138,0	0/0:7,0:7:21.07:0,21,335	0/0:21,0:16:45.15:0,45,720	0/0:25,0:22:57.11:0,57,837	1/1:0,23:23:60.11:795,60,0	0/0:12,0:12:36.12:0,36,576	0/0:24,0:24:72.25:0,72,1149	0/0:28,0:28:81.26:0,81,1252	1/1:0,19:19:57.19:797,57,0	0/0:19,0:19:57.19:0,57,912	0/0:16,0:16:45.14:0,45,695	0/0:29,0:29:87.30:0,87,1385	0/0:25,0:25:75.26:0,75,1197	0/0:17,0:17:51.17:0,51,815	0/0:25,0:25:72.22:0,72,1103	1/1:0,18:18:51.17:713,51,0	0/0:42,0:42:99:0,126,1950	1/1:0,14:14:42.14:587,42,0	0/0:17,0:16:48.16:0,48,766	0/0:14,0:14:42.13:0,42,646	0/0:30,0:30:90.29:0,90,1412	0/0:16,0:16:48.15:0,48,744	0/0:16,0:15:45.15:0,45,719	0/0:31,0:31:93.32:0,93,1487	0/0:19,0:19:51.16:0,51,791	0/0:21,0:21:63.19:0,63,964	0/0:26,0:25:75.24:0,75,1166	0/0:9,0:9:27.09:0,27,432
chr10	59105511	.	GC	G	8686.35	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=11.073;DP=622;FS=2.606;HRun=1;HaplotypeScore=66.1949;InbreedingCoeff=0.9957;MQ=82.23;MQ0=0;MQRankSum=-7.894;QD=38.44;ReadPosRankSum=1.001;VQSLOD=5.4528;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,99,1556	0/0:6,0:6:18.06:0,18,287	0/0:19,0:19:57.16:0,57,868	0/0:21,0:21:14.69:0,15,641	0/0:23,0:23:63.20:0,63,980	0/0:17,0:17:51.16:0,51,787	0/0:16,0:16:48.14:0,48,721	0/0:39,0:39:99:0,117,1843	0/0:21,0:21:60.20:0,60,955	1/1:0,13:13:39.13:544,39,0	1/1:0,14:14:36.12:503,36,0	0/0:32,0:32:96.29:0,96,1479	0/0:30,0:30:90.26:0,90,1382	1/1:0,18:18:48.16:670,48,0	1/1:0,29:29:78.26:1090,78,0	0/0:21,0:21:63.21:0,63,1006	0/0:33,0:33:99:0,99,1532	0/0:27,0:27:81.26:0,81,1263	1/1:0,26:26:75.22:1012,75,0	1/1:0,15:15:39.13:545,39,0	1/1:0,36:36:96.32:1341,96,0	0/0:12,0:12:36.12:0,36,573	0/0:20,0:20:60.03:0,60,892	0/0:25,0:25:75.24:0,75,1171	1/1:0,21:21:54.18:752,54,0	1/1:0,17:17:51.13:690,51,0	1/1:0,30:30:90.30:1245,90,0	1/1:0,7:7:21.07:293,21,0
chr10	59105871	.	A	AACT	10837.44	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-14.621;DP=841;FS=2.247;HRun=0;HaplotypeScore=110.4950;InbreedingCoeff=0.9928;MQ=76.64;MQ0=0;MQRankSum=-6.063;QD=53.92;ReadPosRankSum=3.351;VQSLOD=7.2161;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,43:49:99:2378,105,0	0/0:4,0:4:12.04:0,12,200	0/0:14,0:14:39.06:0,39,598	0/0:20,0:20:44.67:0,45,585	1/1:5,26:31:69.23:1493,69,0	0/0:28,0:28:81.28:0,81,1342	0/0:18,0:18:45.15:0,45,749	0/0:50,0:50:99:0,132,2172	1/1:5,51:56:99:3216,144,0	0/0:28,0:27:75.25:0,75,1225	0/0:17,0:17:48.15:0,48,775	0/0:43,0:43:99:0,123,2037	0/0:44,0:44:99:0,126,2020	0/0:44,0:44:99:0,126,2099	0/0:55,0:55:99:0,157,2598	1/1:5,45:51:99:2874,129,0	0/0:27,0:27:81.28:0,81,1349	1/1:0,14:14:39.13:876,39,0	0/0:23,0:23:69.20:0,69,1051	0/0:16,0:16:45.15:0,45,746	0/0:40,0:40:99:0,117,1916	0/0:22,0:22:60.21:0,60,1000	0/0:20,0:20:57.17:0,57,897	0/0:24,0:24:66.18:0,66,1069	0/0:21,0:21:63.22:0,63,1049	0/0:26,0:26:72.24:0,72,1175	0/0:40,0:40:99:0,114,1893	0/0:16,0:16:48.16:0,48,798
chr10	59109221	.	A	AT	15752.11	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-3.604;DP=586;FS=0.000;HRun=4;HaplotypeScore=116.4896;InbreedingCoeff=0.9953;MQ=78.44;MQ0=0;MQRankSum=-7.055;QD=28.69;ReadPosRankSum=3.438;VQSLOD=3.7943;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,20:26:57.48:776,57,0	1/1:1,7:8:21.02:264,21,0	0/0:24,0:22:31.62:0,32,307	0/0:13,0:13:23.14:0,23,248	1/1:5,18:23:60.08:732,60,0	1/1:0,13:13:36.12:491,36,0	1/1:2,18:20:45.15:614,45,0	1/1:3,23:26:69.15:848,69,0	1/1:8,13:21:54.10:648,54,0	1/1:25,0:25:69.08:653,69,0	1/1:22,0:22:60.03:555,60,0	1/1:0,25:25:69.23:942,69,0	1/1:3,12:15:33.11:451,33,0	1/1:20,0:20:47.83:431,48,0	1/1:24,2:26:68.89:664,69,0	1/1:5,22:27:69.21:911,69,0	1/1:1,25:26:66.22:896,66,0	1/1:1,11:12:36.11:476,36,0	1/1:16,1:17:45.07:438,45,0	1/1:25,0:26:62.63:562,63,0	1/1:13,1:14:27.04:269,27,0	1/1:2,26:28:72.11:936,72,0	1/1:2,20:22:48.63:655,49,0	1/1:1,15:16:39.13:528,39,0	1/1:23,1:24:53.85:505,54,0	1/1:32,0:32:77.95:715,78,0	1/1:21,0:21:55.61:485,56,0	1/1:13,1:14:30.03:309,30,0
chr10	59109225	.	T	TTA	15171.66	PASS	AB=1.000;AC=50;AF=0.893;AN=56;BaseQRankSum=-1.001;DP=579;FS=5.759;HRun=0;HaplotypeScore=125.7552;InbreedingCoeff=0.6064;MQ=76.02;MQ0=0;MQRankSum=-3.940;QD=27.84;ReadPosRankSum=7.623;VQSLOD=5.8861;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:27:12.58:299,0,13	1/1:8,0:8:2.64:96,3,0	0/0:21,0:20:36.79:0,37,427	0/0:11,0:12:23.14:0,23,296	1/1:23,0:23:23.76:292,24,0	1/1:13,0:13:34.80:195,35,0	1/1:18,0:18:43.59:247,44,0	0/1:28,0:28:5.14:330,0,5	1/1:20,0:20:32.41:289,32,0	1/1:0,22:23:69.18:1194,69,0	1/1:2,23:26:66.13:1206,66,0	1/1:27,0:27:48.64:361,49,0	1/1:13,0:13:13.72:160,14,0	1/1:0,18:18:48.16:926,48,0	1/1:3,21:28:69.02:1250,69,0	1/1:26,0:26:15.26:333,15,0	1/1:25,0:25:63.79:356,64,0	1/1:12,0:12:34.93:205,35,0	1/1:2,16:19:57.06:949,57,0	1/1:2,20:23:62.76:1111,63,0	1/1:2,11:14:29.99:519,30,0	1/1:28,0:28:31.57:350,32,0	1/1:23,0:23:24.21:234,24,0	1/1:15,0:15:37.58:208,38,0	1/1:4,22:28:60.07:1032,60,0	1/1:3,26:29:81.19:1468,81,0	1/1:7,14:21:63.12:1062,63,0	1/1:4,6:10:30.08:500,30,0
chr10	59109286	.	T	TG	2907.72	PASS	AB=0.746;AC=19;AF=0.339;AN=56;BaseQRankSum=-4.232;DP=521;FS=3.852;HRun=9;HaplotypeScore=99.7636;InbreedingCoeff=0.6244;MQ=74.77;MQ0=0;MQRankSum=-0.311;QD=13.40;ReadPosRankSum=-3.926;VQSLOD=2.8609;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:24:32.59:0,33,95	0/0:6,0:6:17.99:0,18,156	0/1:16,0:15:15.95:16,0,131	0/0:8,0:8:10.85:0,11,69	0/0:5,0:23:30.07:0,30,88	0/0:17,0:17:35.94:0,36,305	0/0:20,0:20:50.98:0,51,443	0/0:23,1:24:23.89:0,24,208	0/0:2,0:18:21.67:0,22,74	1/1:12,10:22:36.10:397,36,0	0/1:16,3:20:60.13:74,0,60	0/0:14,0:14:29.98:0,30,260	0/0:19,0:19:44.98:0,45,390	1/1:6,4:10:12.02:125,12,0	1/1:9,14:23:25.54:496,26,0	0/0:4,0:23:38.70:0,39,114	0/0:26,0:27:65.01:0,65,553	0/0:2,0:14:18.80:0,19,54	0/1:13,9:22:27.47:362,0,27	1/1:11,7:18:23.35:239,23,0	1/1:5,5:10:15.50:157,15,0	0/0:25,0:26:38.94:0,39,497	0/0:28,0:28:71.97:0,72,623	0/0:11,0:13:37.07:0,37,298	1/1:15,7:22:25.62:270,26,0	0/1:10,10:20:15.71:296,0,16	1/1:6,16:22:43.67:469,44,0	0/1:1,11:12:1.81:208,0,2
chr10	59110529	.	TGGAATTCG	T	15739.73	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=17.976;DP=658;FS=4.755;HRun=0;HaplotypeScore=180.7971;InbreedingCoeff=0.9743;MQ=74.97;MQ0=0;MQRankSum=-16.383;QD=66.69;ReadPosRankSum=2.130;VQSLOD=4.9420;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,105,4520	0/0:13,0:13:39.13:0,39,1660	0/0:33,0:29:57.38:0,57,2488	0/0:20,0:20:49.05:0,49,1680	0/0:28,0:28:81.26:0,81,3405	0/0:22,0:22:66.21:0,66,2609	0/0:20,0:20:60.21:0,60,2587	0/0:25,0:25:75.25:0,75,2967	0/0:21,0:21:63.22:0,63,2678	1/1:2,26:28:72.25:1993,72,0	1/1:0,22:22:48.12:1263,48,0	0/0:26,0:26:75.24:0,75,2967	0/0:25,0:25:72.25:0,72,2909	1/1:1,16:17:42.14:1191,42,0	1/1:1,33:34:78.27:2217,78,0	0/0:33,0:33:96.31:0,96,4075	0/0:24,0:24:72.25:0,72,3217	0/0:15,0:15:45.15:0,45,1780	1/1:2,7:9:21.07:573,21,0	1/1:1,22:24:48.16:1328,48,0	1/1:0,3:3:3.01:40,3,0	0/0:21,0:21:60.21:0,60,2601	0/0:35,0:35:98.82:0,99,4146	0/0:25,0:25:72.25:0,72,3098	1/1:2,18:20:48.16:1364,48,0	1/1:2,33:35:99:2644,102,0	1/1:1,27:28:75.26:2137,75,0	1/1:1,15:16:36.12:991,36,0
chr10	59111532	.	AT	A	7805.69	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-6.585;DP=377;FS=13.166;HRun=10;HaplotypeScore=51.0013;InbreedingCoeff=0.9143;MQ=81.33;MQ0=0;MQRankSum=-5.018;QD=22.56;ReadPosRankSum=4.596;VQSLOD=4.5397;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,20:20:53.99:469,54,0	1/1:0,6:6:18:156,18,0	0/0:17,0:14:19.20:0,19,205	0/0:13,0:11:20.25:0,20,145	1/1:2,24:26:68.90:590,69,0	1/1:1,21:24:61.05:507,61,0	1/1:0,5:5:15:130,15,0	1/1:4,26:30:77.96:671,78,0	1/1:0,8:8:18:156,18,0	1/1:2,15:17:44.93:384,45,0	1/1:1,12:13:35.99:312,36,0	1/1:0,10:10:29.99:260,30,0	1/1:1,11:12:29.99:260,30,0	1/1:4,2:6:6:52,6,0	1/1:0,6:6:18:156,18,0	1/1:0,13:13:32.99:287,33,0	1/1:1,21:22:56.99:495,57,0	1/1:3,13:16:38.98:338,39,0	1/1:2,17:20:53.02:449,53,0	1/1:1,11:12:32.99:286,33,0	1/1:0,8:8:24:208,24,0	1/1:0,6:6:18:156,18,0	1/1:0,8:8:24:208,24,0	1/1:0,7:7:21:182,21,0	1/1:3,13:15:38.99:339,39,0	1/1:3,11:14:32.97:283,33,0	1/1:1,11:12:29.99:260,30,0	1/1:0,9:9:24:208,24,0
chr10	59112956	.	GT	G	6520.98	PASS	AB=0.565;AC=51;AF=0.911;AN=56;BaseQRankSum=-6.284;DP=350;FS=20.700;HRun=10;HaplotypeScore=41.2884;InbreedingCoeff=0.7937;MQ=82.78;MQ0=2;MQRankSum=-4.496;QD=21.17;ReadPosRankSum=5.249;VQSLOD=3.5236;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,19:20:56.99:495,57,0	1/1:1,4:5:12:104,12,0	0/0:24,0:16:28.81:0,29,233	0/0:18,0:12:18.46:0,18,174	1/1:1,13:14:38.99:338,39,0	1/1:0,14:14:41.99:364,42,0	1/1:2,8:10:20.99:182,21,0	1/1:6,32:38:95.88:812,96,0	1/1:2,8:10:23.98:208,24,0	1/1:0,12:12:35.99:312,36,0	1/1:2,11:13:26.98:234,27,0	1/1:2,4:6:12:104,12,0	1/1:3,5:8:14.99:130,15,0	0/1:3,10:13:0.19:227,0,0	1/1:1,12:13:19.15:270,19,0	1/1:0,7:7:21:182,21,0	1/1:0,14:14:35.99:312,36,0	1/1:1,12:13:26.98:234,27,0	1/1:4,9:13:26.99:234,27,0	1/1:1,9:10:23.99:208,24,0	1/1:1,5:6:9:78,9,0	1/1:2,9:12:26.02:214,26,0	1/1:0,7:7:21:182,21,0	1/1:1,6:7:17.99:156,18,0	1/1:1,9:10:23.99:208,24,0	1/1:2,13:15:41.99:364,42,0	1/1:4,4:8:11.98:104,12,0	1/1:0,10:10:29.99:260,30,0
chr10	59113020	.	T	TTTTATTTA	4479.74	PASS	AC=38;AF=0.950;AN=40;BaseQRankSum=2.092;DP=197;FS=0.000;HRun=0;HaplotypeScore=57.2501;InbreedingCoeff=0.2278;MQ=63.55;MQ0=2;MQRankSum=-4.857;QD=31.77;ReadPosRankSum=-2.932;VQSLOD=3.5238;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:5:3.01:104,3,0	./.	./.	./.	./.	1/1:6,0:10:21.03:585,21,0	1/1:2,0:2:3.01:102,3,0	1/1:24,0:24:21.05:353,21,0	1/1:2,0:3:3.01:97,3,0	1/1:7,0:7:6.02:131,6,0	./.	1/1:3,0:4:3.01:104,3,0	1/1:7,0:8:18.06:579,18,0	1/1:7,0:7:3.01:96,3,0	./.	1/1:5,0:5:3.01:104,3,0	0/0:22,0:22:36.12:0,36,895	1/1:9,0:9:9.03:304,9,0	1/1:8,2:10:13.86:411,14,0	1/1:2,1:3:6.01:148,6,0	./.	1/1:5,0:5:3.01:104,3,0	1/1:7,0:7:3.01:104,3,0	./.	1/1:5,3:8:12.04:428,12,0	1/1:7,3:10:9.03:368,9,0	1/1:5,1:6:9.02:236,9,0	1/1:7,1:7:3.01:123,3,0
chr10	59113462	.	CT	C	4964.11	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=11.423;DP=461;FS=1.185;HRun=6;HaplotypeScore=45.4541;InbreedingCoeff=0.9962;MQ=77.14;MQ0=0;MQRankSum=-0.452;QD=28.21;ReadPosRankSum=-0.058;VQSLOD=4.9877;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:39.11:0,39,496	1/1:1,7:8:21.05:225,21,0	0/0:10,0:10:23.85:0,24,322	0/0:10,0:10:24.07:0,24,293	0/0:20,0:20:48.16:0,48,631	1/1:0,16:16:42.11:451,42,0	1/1:1,11:12:26.95:290,27,0	1/1:4,33:37:99:1063,99,0	0/0:10,0:10:27.09:0,27,355	0/0:15,0:14:39.13:0,39,513	0/0:18,0:18:54.18:0,54,708	1/1:2,14:16:39.10:419,39,0	1/1:2,25:27:75.19:806,75,0	0/0:23,0:23:66.19:0,66,838	0/0:24,0:24:72.23:0,72,947	0/0:14,0:13:42.14:0,42,552	1/1:2,26:28:72.18:774,72,0	0/0:8,0:8:24.08:0,24,316	0/0:15,0:15:39.12:0,39,500	0/0:18,0:18:48.16:0,48,632	0/0:15,0:15:42.11:0,42,524	1/1:0,9:9:24.06:258,24,0	1/1:1,6:7:18.05:193,18,0	1/1:0,16:16:45.11:484,45,0	0/0:16,0:16:48.16:0,48,631	0/0:10,0:10:24.08:0,24,316	0/0:32,0:32:87.27:0,87,1130	0/0:13,0:13:30.05:0,30,375
chr10	59114263	.	CT	C	4832.93	PASS	AB=0.950;AC=21;AF=0.375;AN=56;BaseQRankSum=14.160;DP=654;FS=4.962;HRun=9;HaplotypeScore=72.9949;InbreedingCoeff=0.9395;MQ=74.19;MQ0=0;MQRankSum=-0.302;QD=20.83;ReadPosRankSum=0.759;VQSLOD=5.5386;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:93.26:0,93,1063	1/1:2,4:6:9:82,9,0	0/1:18,1:19:2.84:3,0,285	0/0:12,0:10:17.97:0,18,179	0/0:31,0:31:81.22:0,81,921	1/1:0,29:29:72.04:659,72,0	1/1:2,14:16:33.01:301,33,0	1/1:6,33:39:99:905,99,0	0/0:22,0:22:63.19:0,63,724	0/0:31,0:31:81.22:0,81,919	0/0:32,0:33:93.10:0,93,1045	1/1:2,27:29:72.03:659,72,0	1/1:3,19:22:57.02:522,57,0	0/0:26,0:26:75.22:0,75,866	0/0:25,0:25:70.06:0,70,771	0/0:26,0:26:63.18:0,63,719	1/1:1,21:22:57.03:521,57,0	0/0:12,0:12:36.11:0,36,415	0/0:23,1:24:32.71:0,33,630	0/0:27,0:27:66.65:0,67,752	0/0:13,0:14:32.93:0,33,361	1/1:1,17:18:48.02:439,48,0	1/1:0,17:17:42.02:384,42,0	1/1:1,14:15:39.02:357,39,0	0/0:37,0:37:99:0,102,1168	0/0:20,0:20:51.15:0,51,589	0/0:34,0:34:90.25:0,90,1029	0/0:15,0:15:45.12:0,45,509
chr10	59114805	.	A	AT	6687.06	PASS	AB=1.000;AC=31;AF=0.554;AN=56;BaseQRankSum=-5.344;DP=527;FS=4.822;HRun=8;HaplotypeScore=90.3101;InbreedingCoeff=0.8871;MQ=70.23;MQ0=0;MQRankSum=-1.705;QD=21.78;ReadPosRankSum=0.539;VQSLOD=5.0774;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,31:32:75.22:861,75,0	1/1:1,1:4:5.68:29,6,0	0/0:16,0:15:25.39:0,25,224	0/0:14,0:12:24.63:0,25,221	1/1:1,22:26:71.86:739,72,0	1/1:3,21:24:43.37:591,43,0	1/1:1,15:16:33.10:379,33,0	1/1:9,0:29:57.54:328,58,0	1/1:2,20:22:50.86:601,51,0	0/0:29,0:29:73.57:0,74,292	0/0:10,0:10:24.79:0,25,108	1/1:1,7:8:18.05:207,18,0	1/1:3,7:10:21.06:241,21,0	0/1:18,0:18:4.87:5,0,146	0/0:16,0:16:17.71:0,18,159	1/1:2,21:23:49.44:676,49,0	1/1:5,1:34:79.71:422,80,0	1/1:4,26:30:54.15:712,54,0	0/0:16,0:16:0.36:0,0,75	0/0:29,1:30:36.34:0,36,296	0/0:9,0:9:19.86:0,20,96	1/1:1,8:9:24.07:276,24,0	1/1:1,8:10:27.08:310,27,0	1/1:2,10:12:27.08:310,27,0	0/0:25,1:26:35.37:0,35,265	0/0:25,0:25:57.46:0,57,253	0/0:20,0:20:22.58:0,23,197	0/0:9,0:9:13.66:0,14,67
chr10	59114904	.	C	CTG	735.04	PASS	AB=0.925;AC=14;AF=0.250;AN=56;BaseQRankSum=4.278;DP=521;FS=15.237;HRun=0;HaplotypeScore=107.7377;InbreedingCoeff=-0.0660;MQ=59.05;MQ0=7;MQRankSum=3.536;QD=2.99;ReadPosRankSum=-1.569;VQSLOD=0.9614;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:49:0,49,618	0/0:2,0:2:6:0,6,52	0/0:21,0:8:15.99:0,16,208	0/0:19,0:11:23.60:0,24,315	0/1:26,0:26:13.77:14,0,364	0/0:16,0:16:1.13:0,1,286	0/0:19,0:19:37.83:0,38,492	0/0:29,0:29:77.85:0,78,1027	0/1:13,1:14:4.87:5,0,255	0/1:19,1:20:12.86:56,0,13	0/1:13,1:14:2.86:38,0,3	0/0:18,0:18:37.68:0,38,532	0/0:12,0:11:5.81:0,6,183	0/1:19,1:21:5.62:120,0,6	0/1:19,1:20:11.65:41,0,12	0/1:16,0:16:13.60:14,0,377	0/0:38,0:38:67.60:0,68,845	0/0:26,0:26:10.24:0,10,457	0/1:17,0:16:37.40:55,0,37	0/1:16,8:24:24.24:77,0,24	0/1:6,5:11:15.23:35,0,15	0/0:10,0:10:16.56:0,17,243	0/0:13,0:13:27.60:0,28,329	0/0:19,0:19:20.01:0,20,199	1/1:6,6:12:14.47:259,14,0	0/1:23,0:23:33.78:58,0,34	0/1:26,1:27:35.15:117,0,35	0/0:5,0:5:0:0,0,0
chr10	59114906	.	C	CTGTG	2807.98	PASS	AB=0.940;AC=37;AF=0.771;AN=48;BaseQRankSum=-0.077;DP=565;FS=11.324;HRun=0;HaplotypeScore=132.5432;InbreedingCoeff=-0.2629;MQ=56.43;MQ0=8;MQRankSum=0.504;QD=5.41;ReadPosRankSum=-1.172;VQSLOD=1.9752;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:18,1:29:14.11:175,14,0	./.	./.	./.	1/1:15,0:26:5.75:69,6,0	1/1:20,0:20:3.01:46,3,0	1/1:17,2:23:6.02:122,6,0	0/1:29,0:29:0.11:0,0,26	1/1:16,0:17:23.74:244,24,0	0/1:21,0:21:18.22:108,0,18	1/1:13,0:13:5.98:68,6,0	1/1:19,0:19:6:75,6,0	1/1:9,1:11:15.05:281,15,0	0/1:23,0:23:12.91:82,0,13	0/1:20,0:20:20.77:21,0,29	1/1:13,5:19:15.05:286,15,0	0/1:24,0:40:51.08:51,0,60	0/1:12,16:29:31.44:264,0,31	0/1:20,0:19:12.58:31,0,13	0/1:25,0:25:29.67:43,0,30	0/1:13,0:13:28.53:35,0,29	1/1:9,0:13:9.03:188,9,0	1/1:13,1:14:9.03:157,9,0	1/1:20,2:25:6.02:142,6,0	1/1:12,0:12:21:185,21,0	0/1:25,0:25:8.85:149,0,9	0/1:30,0:29:60.82:123,0,61	./.
chr10	59115677	.	GCACACACACACA	G	21599.88	PASS	AB=0.623;AC=49;AF=0.875;AN=56;BaseQRankSum=5.901;DP=635;FS=11.750;HRun=0;HaplotypeScore=228.5231;InbreedingCoeff=0.4860;MQ=48.15;MQ0=13;MQRankSum=-1.596;QD=38.43;ReadPosRankSum=3.480;VQSLOD=3.1946;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,25:40:12.04:400,12,0	1/1:2,12:14:27.09:948,27,0	0/0:36,0:21:21.07:0,21,699	0/0:37,0:17:12.48:0,12,248	1/1:11,17:29:35.64:839,36,0	1/1:11,11:22:27.09:944,27,0	0/1:11,18:29:7.91:915,0,8	1/1:13,9:22:23.43:287,23,0	1/1:6,17:24:33.11:1063,33,0	1/1:7,10:18:20.23:1057,20,0	1/1:11,8:18:29.90:704,30,0	1/1:2,21:24:51.18:1739,51,0	1/1:3,14:17:27.09:947,27,0	1/1:3,16:21:39.13:1331,39,0	1/1:5,21:26:35.86:1264,36,0	1/1:4,18:24:51.18:1745,51,0	1/1:8,19:29:29.92:962,30,0	0/1:9,8:17:39.71:316,0,40	1/1:5,4:8:12.04:227,12,0	1/1:2,21:24:36.12:1083,36,0	1/1:21,11:32:5.93:118,6,0	1/1:3,20:23:30.10:1042,30,0	1/1:2,9:11:15.05:444,15,0	1/1:4,17:21:12.04:421,12,0	1/1:5,14:20:12.04:390,12,0	1/1:4,14:17:36.01:1014,36,0	1/1:3,14:17:27.01:913,27,0	0/1:3,8:12:4.70:487,0,5
chr10	59116082	.	A	AAAG	38758.68	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-5.349;DP=746;FS=2.368;HRun=0;HaplotypeScore=102.5162;InbreedingCoeff=0.9987;MQ=74.89;MQ0=0;MQRankSum=-9.252;QD=54.59;ReadPosRankSum=5.151;VQSLOD=7.0480;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,26:30:69.15:1421,69,0	1/1:0,10:10:24:486,24,0	0/0:20,0:20:48.15:0,48,756	0/0:16,0:16:41.92:0,42,545	1/1:2,32:34:90.17:1916,90,0	1/1:1,33:34:93.32:2082,93,0	1/1:3,20:23:57.19:1216,57,0	1/1:5,31:38:99:2144,105,0	1/1:5,20:26:57.11:1181,57,0	1/1:5,30:37:99:2226,105,0	1/1:6,27:33:72.25:1582,72,0	1/1:2,25:29:75.21:1605,75,0	1/1:1,26:27:78.27:1718,78,0	1/1:1,20:24:63.17:1361,63,0	1/1:2,36:39:99:2437,111,0	1/1:2,28:30:72.25:1611,72,0	1/1:2,20:22:42.06:891,42,0	1/1:4,12:16:33.11:739,33,0	1/1:4,11:16:39.12:804,39,0	1/1:3,23:26:66.23:1446,66,0	1/1:1,16:18:45.07:914,45,0	1/1:2,21:25:54.14:1161,54,0	1/1:2,22:24:66.22:1416,66,0	1/1:2,14:16:39.10:826,39,0	1/1:3,34:37:99:2206,102,0	1/1:3,32:35:96.30:2068,96,0	1/1:2,29:32:93.28:2027,93,0	1/1:2,25:27:57.20:1276,57,0
chr10	59118792	.	G	GTGGA	1990.10	PASS	AB=0.765;AC=18;AF=0.346;AN=52;BaseQRankSum=-6.010;DP=814;FS=0.000;HRun=0;HaplotypeScore=198.5177;InbreedingCoeff=0.7160;MQ=68.87;MQ0=14;MQRankSum=-0.696;QD=7.90;ReadPosRankSum=-4.067;VQSLOD=2.1121;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:67:33.02:0,33,303	0/0:12,0:12:24.08:0,24,365	./.	./.	0/0:10,0:21:30.03:0,30,277	1/1:13,0:19:12.04:184,12,0	1/1:34,0:34:30.07:414,30,0	1/1:33,0:33:1.25:3,1,0	0/0:34,0:34:48.15:0,48,707	0/0:34,0:34:15.05:0,15,226	0/0:16,0:16:9.03:0,9,130	0/1:18,9:28:63.24:241,0,63	1/1:13,16:30:18.06:413,18,0	0/0:33,0:33:51.17:0,51,762	0/0:44,0:44:66.21:0,66,984	0/0:10,0:28:54.05:0,54,499	0/0:48,0:48:40.95:0,41,589	0/0:14,0:21:14.92:0,15,128	1/1:15,0:14:12.02:183,12,0	0/0:22,0:22:36.12:0,36,536	0/0:43,0:43:57.13:0,57,813	1/1:11,11:22:18.06:378,18,0	1/1:6,6:12:3.01:68,3,0	1/1:17,16:35:12.04:241,12,0	0/1:17,6:23:49.71:50,0,198	0/0:27,0:27:30.10:0,30,456	0/0:24,0:24:39.13:0,39,588	0/0:3,0:3:6.02:0,6,91
chr10	59118994	.	AG	A	9359.26	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=17.177;DP=686;FS=12.246;HRun=1;HaplotypeScore=103.9837;InbreedingCoeff=0.9986;MQ=81.71;MQ0=0;MQRankSum=-0.639;QD=38.67;ReadPosRankSum=2.717;VQSLOD=4.0265;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,138,2084	0/0:11,0:11:30.10:0,30,462	0/0:17,0:17:50.72:0,51,698	0/0:21,0:22:35.49:0,35,862	0/0:18,0:18:54.16:0,54,800	0/0:30,0:30:90.27:0,90,1358	0/0:41,0:41:99:0,120,1779	0/0:30,0:30:90.26:0,90,1323	0/0:25,0:25:75.24:0,75,1150	1/1:0,23:23:69.12:886,69,0	1/1:1,18:19:54.12:707,54,0	0/0:24,0:24:69.22:0,69,1055	0/0:27,0:27:81.26:0,81,1229	1/1:0,21:21:57.19:796,57,0	1/1:0,22:22:63.21:880,63,0	0/0:24,0:24:72.23:0,72,1103	0/0:40,0:40:99:0,120,1862	0/0:19,0:19:57.15:0,57,843	1/1:0,20:20:60.15:771,60,0	1/1:0,11:11:30.10:419,30,0	1/1:0,47:47:99:1883,135,0	0/0:12,0:12:33.11:0,33,514	0/0:19,0:19:57.19:0,57,886	0/0:36,0:36:99:0,105,1587	1/1:0,23:23:60.19:837,60,0	1/1:0,33:33:99:1313,99,0	1/1:0,17:17:45.15:627,45,0	1/1:1,5:6:18.06:241,18,0
chr10	59119824	.	G	GC	22814.96	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-7.389;DP=685;FS=15.212;HRun=3;HaplotypeScore=68.2317;InbreedingCoeff=0.9995;MQ=83.14;MQ0=0;MQRankSum=-9.029;QD=35.43;ReadPosRankSum=5.066;VQSLOD=3.7284;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,44:50:99:1722,123,0	1/1:1,14:15:36.12:504,36,0	0/0:23,0:23:44.35:0,44,576	0/0:18,0:18:45.12:0,45,526	1/1:2,21:23:60.20:840,60,0	1/1:1,15:16:45.15:627,45,0	1/1:0,19:19:48.16:672,48,0	1/1:3,28:31:69.19:913,69,0	1/1:0,11:11:30.10:420,30,0	1/1:0,14:14:42.14:588,42,0	1/1:2,23:25:66.22:923,66,0	1/1:1,31:32:81.27:1129,81,0	1/1:2,19:21:57.19:798,57,0	1/1:2,24:26:72.23:987,72,0	1/1:1,22:23:57.19:798,57,0	1/1:2,21:23:57.19:798,57,0	1/1:2,27:29:78.26:1092,78,0	1/1:1,22:23:60.20:840,60,0	1/1:2,24:26:75.21:987,75,0	1/1:2,12:14:33.11:462,33,0	1/1:3,39:42:99:1470,105,0	1/1:0,21:21:51.17:713,51,0	1/1:0,21:21:51.17:714,51,0	1/1:5,41:46:99:1596,114,0	1/1:0,19:20:48.16:672,48,0	1/1:2,30:32:87.29:1211,87,0	1/1:1,22:23:51.17:707,51,0	1/1:0,18:18:45.15:629,45,0
chr10	59120219	.	AT	A	4291.53	PASS	AB=0.900;AC=23;AF=0.411;AN=56;BaseQRankSum=2.884;DP=566;FS=4.390;HRun=10;HaplotypeScore=69.4817;InbreedingCoeff=0.8736;MQ=65.75;MQ0=0;MQRankSum=0.232;QD=17.81;ReadPosRankSum=1.775;VQSLOD=5.6380;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,111,1210	0/0:3,0:9:14.20:0,14,71	0/0:3,0:1:0:0,0,0	0/1:8,0:9:1.68:2,0,39	0/0:33,0:33:52.19:0,52,804	0/0:20,0:20:54.12:0,54,579	0/0:19,0:19:42.07:0,42,451	0/0:10,0:29:57.49:0,57,327	0/0:20,0:20:57.14:0,57,621	1/1:5,22:28:68:576,68,0	1/1:4,25:29:65.96:572,66,0	0/0:18,0:18:54.15:0,54,597	0/0:25,0:25:69.19:0,69,763	1/1:8,13:21:32.98:286,33,0	1/1:1,15:16:32.98:286,33,0	0/0:20,0:20:51.13:0,51,556	0/0:5,0:33:74.03:0,74,388	0/0:17,0:17:39.11:0,39,430	1/1:7,12:19:3.56:255,4,0	1/1:5,20:25:56.97:494,57,0	1/1:1,11:12:1.33:183,1,0	0/0:9,0:9:27.07:0,27,299	0/0:18,0:19:41.96:0,42,435	0/0:9,0:9:24.06:0,24,265	1/1:5,24:29:56.92:518,57,0	1/1:2,16:18:47.98:417,48,0	1/1:2,21:23:59.97:521,60,0	1/1:4,8:12:20.99:182,21,0
chr10	59121213	.	AGAGAGAGAGAG	A	744.25	PASS	AB=0.592;AC=8;AF=0.143;AN=56;BaseQRankSum=6.256;DP=533;FS=21.099;HRun=0;HaplotypeScore=149.0343;InbreedingCoeff=0.6578;MQ=65.09;MQ0=23;MQRankSum=-0.965;QD=7.30;ReadPosRankSum=-0.806;VQSLOD=0.7869;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,0:11:8.99:97,9,0	0/0:10,0:10:21.53:0,22,347	0/0:22,0:17:47.84:0,48,502	0/0:24,0:18:42.08:0,42,450	1/1:2,0:18:12.34:96,12,0	0/0:17,0:16:29.90:0,30,716	0/0:17,0:17:38.91:0,39,665	0/0:32,0:31:77.64:0,78,883	0/1:2,0:9:99:209,0,104	0/0:21,0:21:54.53:0,55,1003	0/0:10,0:10:24.07:0,24,283	0/0:19,0:19:48.54:0,49,801	0/0:12,0:12:33.10:0,33,931	0/0:17,0:17:31.64:0,32,610	0/0:23,0:23:47.98:0,48,876	1/1:3,18:20:13.27:449,13,0	0/0:19,0:19:50.74:0,51,848	0/1:9,0:18:37.61:38,0,86	0/0:17,0:17:28.81:0,29,305	0/0:14,0:14:30.35:0,30,338	0/0:24,0:24:54.13:0,54,1135	0/0:29,0:28:63.17:0,63,1369	0/0:7,0:7:14.64:0,15,181	0/0:27,0:26:66.20:0,66,1635	0/0:14,0:14:15.04:0,15,234	0/0:27,0:27:72.14:0,72,1335	0/0:23,0:23:58.07:0,58,1137	0/0:5,0:5:15.05:0,15,395
chr10	59121385	.	C	CA	14266.36	PASS	AB=0.947;AC=37;AF=0.661;AN=56;BaseQRankSum=-9.784;DP=623;FS=0.000;HRun=0;HaplotypeScore=138.8635;InbreedingCoeff=0.8979;MQ=88.86;MQ0=0;MQRankSum=-6.708;QD=34.80;ReadPosRankSum=2.270;VQSLOD=4.2238;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:53.99:0,54,336	0/0:3,0:3:7.67:0,8,29	0/0:23,0:23:66.19:0,66,865	0/0:30,0:30:68.10:0,68,996	0/0:12,0:12:8.99:0,9,106	1/1:4,12:16:41.40:511,41,0	1/1:4,11:15:39.48:467,39,0	0/0:31,0:31:41.67:0,42,197	0/1:17,1:18:37.03:37,0,163	1/1:0,29:29:84.22:1162,84,0	1/1:0,21:21:63.21:897,63,0	1/1:3,15:18:47.92:644,48,0	1/1:7,8:15:19.27:376,19,0	1/1:0,28:28:69.23:988,69,0	1/1:0,27:27:78.26:1120,78,0	0/0:29,0:29:28.61:0,29,309	0/0:20,0:20:43.93:0,44,191	0/0:28,0:28:39.04:0,39,227	1/1:1,22:23:63.10:888,63,0	1/1:0,13:13:36.12:517,36,0	1/1:2,47:49:99:1764,123,0	1/1:2,11:13:33.92:439,34,0	1/1:2,13:15:41.83:481,42,0	1/1:5,15:20:32.47:421,32,0	1/1:0,22:22:56.93:813,57,0	1/1:1,30:31:90.05:1217,90,0	1/1:0,26:26:75.21:1051,75,0	1/1:0,11:11:33.11:473,33,0
chr10	59121425	.	A	AG	5983.46	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-1.225;DP=636;FS=5.732;HRun=0;HaplotypeScore=127.9850;InbreedingCoeff=0.9993;MQ=80.93;MQ0=0;MQRankSum=-6.263;QD=42.14;ReadPosRankSum=1.517;VQSLOD=4.0077;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,117,1636	0/0:8,0:8:24.08:0,24,336	0/0:22,0:22:58.60:0,59,775	0/0:19,0:19:56.86:0,57,654	0/0:10,0:10:27.09:0,27,377	1/1:0,14:14:42.14:670,42,0	1/1:3,27:30:75.26:1198,75,0	0/0:31,0:31:93.28:0,93,1240	0/0:18,0:18:54.18:0,54,753	0/0:28,0:28:84.28:0,84,1175	0/0:16,0:16:48.16:0,48,669	1/1:0,29:29:84.29:1340,84,0	1/1:1,19:20:57.19:910,57,0	0/0:28,0:28:78.26:0,78,1087	0/0:30,0:30:84.28:0,84,1173	0/0:29,0:29:84.27:0,84,1155	0/0:24,0:24:60.20:0,60,839	0/0:30,0:30:84.28:0,84,1175	0/0:19,0:19:54.14:0,54,732	0/0:23,0:23:66.21:0,66,905	0/0:43,0:43:99:0,120,1676	1/1:0,19:19:51.17:814,51,0	1/1:2,12:14:30.10:477,30,0	1/1:0,16:16:36.59:575,37,0	0/0:17,0:17:48.16:0,48,670	0/0:21,0:21:63.18:0,63,847	0/0:22,0:22:63.21:0,63,877	0/0:17,0:17:48.16:0,48,671
chr10	59122150	.	G	GAT	950.29	PASS	AB=0.862;AC=15;AF=0.268;AN=56;BaseQRankSum=1.127;DP=457;FS=28.114;HRun=0;HaplotypeScore=99.8960;InbreedingCoeff=0.4697;MQ=69.25;MQ0=3;MQRankSum=-1.960;QD=6.79;ReadPosRankSum=-3.744;VQSLOD=0.8152;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:15.01:0,15,168	1/1:4,0:4:9.03:137,9,0	0/0:8,0:6:3.71:0,4,15	0/0:14,0:10:4.23:0,4,14	0/0:25,0:25:39.12:0,39,470	0/1:21,2:22:6.22:251,0,6	1/1:14,1:15:10.32:110,10,0	0/1:13,8:21:7.11:312,0,7	0/0:19,0:18:29.90:0,30,315	0/0:28,0:29:57.83:0,58,678	0/0:18,0:18:36.11:0,36,439	1/1:6,0:6:5.75:59,6,0	1/1:6,0:6:2.81:86,3,0	0/0:10,0:10:20.85:0,21,233	0/0:26,0:26:42.13:0,42,515	0/0:14,0:14:20.63:0,21,255	0/1:8,8:16:20.19:20,0,28	0/0:9,0:8:14.93:0,15,184	0/1:23,0:23:0.30:0,0,370	0/0:19,0:19:33.10:0,33,405	0/0:19,0:19:41.98:0,42,465	0/1:10,0:10:24.64:40,0,25	1/1:14,2:16:8.06:98,8,0	0/0:9,10:19:9:0,9,89	0/0:14,0:14:32.92:0,33,369	0/0:17,0:17:45.13:0,45,540	0/0:16,0:16:33.10:0,33,403	0/0:21,0:21:45.11:0,45,528
chr10	59122165	.	CTGTG	C	1875.20	PASS	AB=0.837;AC=21;AF=0.389;AN=54;BaseQRankSum=-3.279;DP=488;FS=4.025;HRun=0;HaplotypeScore=113.1719;InbreedingCoeff=0.4778;MQ=57.05;MQ0=10;MQRankSum=4.170;QD=7.38;ReadPosRankSum=3.637;VQSLOD=2.2025;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:11.89:0,12,170	0/0:6,0:6:3.01:0,3,48	./.	0/0:10,0:4:3.01:0,3,41	0/0:34,0:33:8.96:0,9,108	0/0:16,0:21:19.23:0,19,222	0/0:7,0:9:4.55:0,5,28	0/0:13,0:13:6.02:0,6,97	0/0:22,0:21:12.49:0,12,169	1/1:16,15:33:48.13:671,48,0	1/1:13,9:22:9.03:143,9,0	0/0:1,0:6:4.24:0,4,26	0/0:5,0:8:4.55:0,5,29	1/1:10,0:10:9.03:142,9,0	1/1:14,15:32:2.52:158,3,0	0/1:15,0:15:0:0,0,0	0/0:15,0:13:3.01:0,3,48	0/0:12,0:11:12.04:0,12,160	0/1:15,1:15:69.81:87,0,70	0/1:9,9:19:59.45:131,0,59	1/1:21,8:27:3.01:47,3,0	0/0:8,0:8:6:0,6,77	0/0:12,0:14:2.94:0,3,18	0/0:24,0:24:5.64:0,6,86	1/1:15,7:22:9.02:122,9,0	1/1:12,7:20:11.54:310,12,0	1/1:8,7:15:11.83:190,12,0	1/1:15,0:16:3.01:44,3,0
chr10	59122303	.	TTGTGTGTG	T	696.07	PASS	AB=1.000;AC=11;AF=0.220;AN=50;BaseQRankSum=1.938;DP=422;FS=0.000;HRun=0;HaplotypeScore=110.5306;InbreedingCoeff=0.6483;MQ=54.89;MQ0=11;MQRankSum=-1.732;QD=7.57;ReadPosRankSum=0.877;VQSLOD=1.3104;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:16,10:26:10.28:230,10,0	0/0:4,0:5:11.96:0,12,184	./.	./.	1/1:10,8:18:5.38:146,5,0	./.	0/0:15,0:14:2.65:0,3,93	0/0:10,0:10:12.03:0,12,265	1/1:5,7:12:9.03:227,9,0	0/0:17,0:18:36.12:0,36,880	0/0:19,0:19:9.03:0,9,363	0/0:6,0:6:0:0,0,0	0/0:7,0:6:7.84:0,8,188	0/0:12,0:12:12.04:0,12,373	0/0:20,0:20:12.04:0,12,266	1/1:6,4:10:6.01:103,6,0	0/0:16,0:16:11.71:0,12,290	1/1:6,2:8:6.02:128,6,0	0/0:18,0:17:8.24:0,8,183	0/0:19,0:16:18.06:0,18,582	0/0:16,0:15:8.84:0,9,156	0/0:15,0:14:0:0,0,0	0/0:9,0:8:0.47:0,0,1	0/1:16,0:14:0:0,0,0	0/0:19,0:19:15.52:0,16,471	0/0:16,0:13:30.10:0,30,806	0/0:26,0:26:12.51:0,13,332	0/0:13,0:17:6.02:0,6,174
chr10	59122435	.	AC	A	8026	PASS	AB=0.976;AC=54;AF=0.964;AN=56;BaseQRankSum=-3.418;DP=545;FS=5.611;HRun=11;HaplotypeScore=104.9086;InbreedingCoeff=0.2619;MQ=76.68;MQ0=1;MQRankSum=-3.302;QD=14.73;ReadPosRankSum=3.420;VQSLOD=5.0596;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,0:39:61.10:177,61,0	1/1:3,2:5:5.98:49,6,0	0/1:19,1:19:2.03:2,0,144	0/1:18,0:18:24.94:25,0,112	1/1:8,0:25:32.57:95,33,0	1/1:5,11:16:35.91:290,36,0	1/1:2,16:18:38.94:320,39,0	1/1:8,8:17:25.95:203,26,0	1/1:4,0:21:32.58:94,33,0	1/1:3,22:25:65.92:542,66,0	1/1:0,11:12:32:252,32,0	1/1:3,20:23:40.46:470,40,0	1/1:1,16:17:41.93:345,42,0	1/1:3,16:19:47.92:394,48,0	1/1:2,16:18:41.93:345,42,0	1/1:0,0:22:40.74:118,41,0	1/1:4,25:29:56.92:468,57,0	1/1:1,0:12:20.37:59,20,0	1/1:3,7:10:23.96:195,24,0	1/1:3,12:15:35.94:296,36,0	1/1:5,24:29:51.57:568,52,0	1/1:4,16:21:55:428,55,0	1/1:4,12:16:35.95:296,36,0	1/1:4,18:22:38.95:320,39,0	1/1:0,16:16:47.95:394,48,0	1/1:0,24:24:71.92:591,72,0	1/1:3,13:16:19.48:298,19,0	1/1:3,16:19:47.93:394,48,0
chr10	59124072	.	A	AT	9918.27	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-15.393;DP=848;FS=6.713;HRun=3;HaplotypeScore=81.7896;InbreedingCoeff=0.9986;MQ=85.79;MQ0=0;MQRankSum=1.061;QD=38.44;ReadPosRankSum=1.643;VQSLOD=4.8901;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,51:51:99:2036,147,0	1/1:0,6:6:18.06:252,18,0	0/0:26,0:26:74.81:0,75,862	0/0:31,0:31:77.95:0,78,869	1/1:1,24:25:69.19:944,69,0	0/0:27,0:27:75.22:0,75,888	0/0:39,0:39:99:0,99,1175	1/1:2,34:36:99:1351,99,0	1/1:0,26:26:75.25:1050,75,0	0/0:28,0:28:78.24:0,78,935	0/0:22,0:22:54.13:0,54,632	0/0:32,0:32:96.29:0,96,1152	0/0:41,0:41:99:0,123,1476	0/0:29,0:29:81.25:0,81,972	0/0:43,0:43:99:0,126,1511	1/1:0,33:33:96.32:1344,96,0	1/1:3,41:44:99:1554,111,0	1/1:0,37:37:99:1386,99,0	0/0:18,0:18:48.12:0,48,554	0/0:24,0:24:66.20:0,66,791	0/0:38,0:38:99:0,111,1317	0/0:29,0:29:81.23:0,81,960	0/0:35,0:35:96.27:0,96,1137	0/0:33,0:33:90.23:0,90,1063	0/0:24,0:23:60.18:0,60,720	0/0:27,0:27:66.18:0,66,770	0/0:30,0:30:90.26:0,90,1069	0/0:14,0:14:42.13:0,42,502
chr10	59124789	.	CCTAA	C	6960.94	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=14.738;DP=767;FS=0.000;HRun=0;HaplotypeScore=142.4693;InbreedingCoeff=0.9951;MQ=54.20;MQ0=12;MQRankSum=-4.333;QD=38.04;ReadPosRankSum=3.652;VQSLOD=5.1902;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:37:69.24:0,69,1839	0/0:20,0:20:60.20:0,60,1543	0/0:20,0:12:30.10:0,30,699	0/0:27,0:18:47.88:0,48,1066	0/0:26,0:26:45.12:0,45,1155	1/1:2,30:32:78.27:1430,78,0	1/1:2,15:14:24.01:403,24,0	0/0:52,0:51:99:0,129,3254	0/0:27,0:27:51.18:0,51,1319	0/0:31,0:30:81.24:0,81,2106	0/0:19,0:18:33.11:0,33,879	1/1:2,26:28:69.24:1254,69,0	1/1:3,31:34:72.25:1320,72,0	0/0:28,0:27:66.23:0,66,1738	0/0:41,0:40:99:0,108,2766	0/0:29,0:29:48.16:0,48,1280	0/0:31,0:29:69.15:0,69,1720	0/0:14,0:12:15.05:0,15,400	0/0:20,0:19:48.15:0,48,1208	0/0:37,0:35:90.22:0,90,2315	0/0:29,0:25:57.20:0,57,1512	1/1:5,18:17:33.11:605,33,0	1/1:1,25:22:42.07:771,42,0	1/1:0,23:23:66.16:1177,66,0	0/0:24,0:19:38.81:0,39,847	0/0:22,0:21:57.20:0,57,1512	0/0:38,0:37:93.32:0,93,2450	0/0:9,0:9:18.06:0,18,480
chr10	59125223	.	TGTG	T	176.74	PASS	AB=0.797;AC=4;AF=0.071;AN=56;BaseQRankSum=7.379;DP=688;FS=11.191;HRun=0;HaplotypeScore=128.3014;InbreedingCoeff=-0.0735;MQ=57.19;MQ0=2;MQRankSum=-5.427;QD=2.56;ReadPosRankSum=4.279;VQSLOD=1.4186;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,135,3242	0/0:16,0:16:48.16:0,48,1183	0/0:33,0:30:80.17:0,80,2043	0/0:20,0:19:57.19:0,57,1317	0/0:27,0:27:81.28:0,81,1979	0/1:9,9:18:99:145,0,316	0/0:12,0:12:33.09:0,33,517	0/0:29,0:29:87.29:0,87,2078	0/0:30,0:30:87.30:0,87,2142	0/0:31,0:31:89.90:0,90,2130	0/0:16,0:16:45.15:0,45,1062	0/1:13,5:18:44.03:44,0,587	0/1:11,6:17:86.71:87,0,440	0/0:35,0:35:99:0,99,2342	0/0:37,0:37:99:0,111,2642	0/0:25,0:25:75.24:0,75,1757	0/0:32,0:32:93.32:0,93,2290	0/0:30,0:30:90.31:0,90,2217	0/0:20,0:19:57.20:0,57,1376	0/0:20,0:20:60.19:0,60,1405	0/0:49,0:49:99:0,141,3348	0/0:9,0:9:21.05:0,21,323	0/0:11,2:13:7:0,7,471	0/1:16,0:16:2.76:3,0,260	0/0:24,0:24:69.24:0,69,1696	0/0:27,0:27:75.25:0,75,1778	0/0:26,0:26:78.25:0,78,1829	0/0:9,0:9:24.08:0,24,591
chr10	59125227	.	AGAGGATGTTTTGCGGAAGCAGGCATG	A	3756.32	PASS	AB=0.837;AC=6;AF=0.107;AN=56;BaseQRankSum=8.767;DP=677;FS=22.348;HRun=0;HaplotypeScore=440.9930;InbreedingCoeff=-0.1178;MQ=58.39;MQ0=2;MQRankSum=-6.245;QD=43.18;ReadPosRankSum=4.719;VQSLOD=0.0336;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,129,11897	0/0:16,0:16:48.16:0,48,4699	0/0:33,0:30:80.27:0,80,3663	0/0:20,0:19:57.19:0,57,2868	0/0:27,0:27:81.28:0,81,8402	0/1:8,9:17:99:1630,0,142	0/1:11,0:11:12.61:13,0,280	0/0:31,0:31:93.31:0,93,6776	0/0:32,0:32:93.32:0,93,8832	0/0:29,0:29:87.30:0,87,7047	0/0:17,0:17:51.18:0,51,4032	0/1:13,5:18:99:803,0,298	0/1:10,6:16:99:1091,0,177	0/0:33,0:33:99:0,99,8491	0/0:36,0:36:99:0,108,10541	0/0:28,0:28:84.29:0,84,7453	0/0:33,0:33:96.33:0,96,8843	0/0:31,0:31:93.32:0,93,8514	0/0:20,0:19:57.19:0,57,3274	0/0:20,0:20:60.21:0,60,5124	0/0:50,0:50:99:0,151,13235	0/0:8,0:8:21.04:0,21,233	0/1:10,2:12:99:207,0,281	0/1:13,0:13:12.31:12,0,172	0/0:23,0:23:69.24:0,69,7819	0/0:23,0:23:69.24:0,69,7251	0/0:25,0:25:75.26:0,75,6003	0/0:12,0:12:33.11:0,33,3760
chr10	59125960	.	TACACAC	T	2793.86	PASS	AB=0.734;AC=18;AF=0.333;AN=54;BaseQRankSum=0.138;DP=561;FS=14.459;HRun=0;HaplotypeScore=126.6413;InbreedingCoeff=0.7052;MQ=71.18;MQ0=8;MQRankSum=-6.225;QD=17.14;ReadPosRankSum=2.302;VQSLOD=2.6060;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:36:21.07:0,21,507	0/0:7,0:14:18.06:0,18,424	0/0:34,0:20:2.98:0,3,21	0/0:36,0:22:3.01:0,3,37	0/0:11,0:26:23.77:0,24,576	0/0:13,0:13:9.03:0,9,247	0/0:24,0:24:18.02:0,18,420	0/0:23,0:23:33.07:0,33,703	0/0:12,0:20:15.02:0,15,270	1/1:10,5:15:17.30:279,17,0	0/1:6,0:7:17.95:36,0,18	0/0:15,0:15:9.03:0,9,246	0/0:14,0:14:9.03:0,9,236	1/1:12,4:16:3.01:56,3,0	1/1:12,11:26:36.94:611,37,0	0/0:11,0:23:24.03:0,24,536	0/0:14,0:33:16.05:0,16,535	0/0:7,0:12:18.02:0,18,335	1/1:13,5:18:9.03:184,9,0	1/1:8,8:16:15.05:301,15,0	./.	0/0:14,0:14:6.02:0,6,143	0/0:9,0:9:8.96:0,9,143	0/0:27,0:27:15.05:0,15,401	0/1:6,10:19:0:369,0,0	1/1:12,6:18:18.06:365,18,0	1/1:4,12:16:33.11:678,33,0	1/1:9,2:12:6.02:104,6,0
chr10	59125995	.	A	ACACG	1768.40	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=4.354;DP=600;FS=18.780;HRun=0;HaplotypeScore=119.3387;InbreedingCoeff=0.2242;MQ=66.82;MQ0=9;MQRankSum=-2.467;QD=5.13;ReadPosRankSum=1.890;VQSLOD=1.3944;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:23:97.33:97,0,132	0/1:11,0:11:72.79:146,0,73	0/0:35,0:13:39.02:0,39,381	0/0:46,0:24:43.35:0,43,476	0/1:27,0:27:99:283,0,129	1/1:4,0:25:9.03:181,9,0	1/1:14,18:32:7.70:93,8,0	0/1:35,0:35:27.07:27,0,504	0/1:14,0:14:76.45:76,0,100	0/0:14,0:14:35.94:0,36,342	0/1:5,0:5:8.97:9,0,74	1/1:2,0:18:6.02:121,6,0	1/1:2,3:26:14.77:289,15,0	0/0:14,0:14:29.93:0,30,256	0/0:26,0:26:59.82:0,60,592	0/1:23,0:23:99:198,0,189	0/1:32,0:32:99:181,0,213	0/1:15,0:15:61.78:62,0,134	0/0:20,0:20:46.81:0,47,419	0/0:14,0:13:21.03:0,21,230	0/0:25,0:25:26.83:0,27,222	1/1:3,0:17:2.92:17,3,0	1/1:0,0:8:3.01:60,3,0	1/1:13,0:34:5.72:109,6,0	0/0:21,0:21:42.02:0,42,434	0/0:15,0:15:44.87:0,45,431	0/0:18,0:17:45.05:0,45,488	0/0:7,0:7:17.97:0,18,166
chr10	59127936	.	C	CT	2707.98	PASS	AB=0.936;AC=27;AF=0.482;AN=56;BaseQRankSum=7.967;DP=564;FS=11.402;HRun=13;HaplotypeScore=100.7796;InbreedingCoeff=0.4611;MQ=67.58;MQ0=6;MQRankSum=-4.267;QD=8.44;ReadPosRankSum=-1.762;VQSLOD=1.2047;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,1:35:37.90:0,38,432	0/0:11,1:12:1.91:0,2,157	0/1:27,0:13:11.81:12,0,42	0/1:18,0:13:8.63:9,0,30	0/0:23,0:25:45.14:0,45,336	0/0:26,0:25:32.32:0,32,139	0/1:13,1:14:7.41:7,0,56	0/0:32,0:31:55.31:0,55,369	0/0:15,0:15:25.05:0,25,177	1/1:6,9:15:18.27:200,18,0	1/1:14,19:33:33.05:404,33,0	0/0:20,0:20:18.62:0,19,88	0/1:17,0:17:16.95:17,0,57	1/1:4,5:9:8.95:73,9,0	1/1:7,6:13:23.97:210,24,0	0/0:11,0:11:29.60:0,30,198	0/0:37,0:38:88.92:0,89,572	0/0:25,0:25:62.48:0,62,432	1/1:10,16:26:25.46:330,25,0	1/1:13,7:21:29.93:299,30,0	0/1:4,4:8:2.78:47,0,3	0/0:2,0:2:2.59:0,3,10	0/1:11,0:10:16.06:16,0,33	0/1:9,0:9:28.07:28,0,30	1/1:16,4:22:1.96:223,2,0	1/1:18,7:26:41.73:346,42,0	1/1:15,8:25:45.89:377,46,0	1/1:8,15:21:33.04:307,33,0
chr10	59127949	.	TA	T	2055.65	PASS	AB=0.936;AC=31;AF=0.554;AN=56;BaseQRankSum=6.599;DP=538;FS=0.000;HRun=3;HaplotypeScore=88.3955;InbreedingCoeff=0.6093;MQ=59.50;MQ0=8;MQRankSum=-3.069;QD=6.94;ReadPosRankSum=-1.777;VQSLOD=-0.0559;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:36:86.36:0,86,963	0/0:11,0:11:30.08:0,30,364	0/0:23,0:9:0.14:0,0,83	0/0:13,0:7:11.89:0,12,117	0/0:28,0:28:69.67:0,70,747	0/1:21,2:22:1.67:118,0,2	0/1:11,1:12:4.62:57,0,5	0/0:37,0:36:91.65:0,92,963	0/0:15,0:15:41.99:0,42,442	1/1:16,0:16:34.56:229,35,0	1/1:31,0:31:42.40:268,42,0	0/1:14,0:14:18.82:38,0,19	0/1:14,1:15:5.66:82,0,6	1/1:8,0:8:6.92:39,7,0	1/1:14,0:14:23.25:142,23,0	0/0:12,0:12:36.08:0,36,416	0/0:39,0:38:99:0,99,1174	0/0:25,0:25:69.17:0,69,840	1/1:26,0:25:42.54:261,43,0	1/1:18,0:18:19.76:82,20,0	1/1:5,0:5:3.92:22,4,0	1/1:2,0:2:2.60:26,3,0	1/1:11,0:10:11.56:93,12,0	0/1:8,1:9:6.41:27,0,6	1/1:20,0:20:23.95:161,24,0	1/1:23,0:24:39.55:241,40,0	1/1:23,0:22:36.36:164,36,0	1/1:23,0:23:45.38:207,45,0
chr10	59128504	.	TTAG	T	12989.56	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=17.740;DP=564;FS=70.648;HRun=0;HaplotypeScore=174.4788;InbreedingCoeff=0.9868;MQ=90.57;MQ0=0;MQRankSum=-14.768;QD=41.77;ReadPosRankSum=1.217;VQSLOD=2.3466;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:87.30:0,87,2035	0/0:7,0:7:18.06:0,18,391	0/0:34,0:34:99:0,99,2140	0/0:28,0:28:72.37:0,72,1674	0/0:16,0:16:39.13:0,39,922	1/1:2,11:13:30.10:529,30,0	1/1:1,17:18:42.14:740,42,0	0/0:27,0:27:75.25:0,75,1689	0/0:29,0:29:87.28:0,87,1929	1/1:2,17:19:54.18:950,54,0	1/1:0,16:16:29.83:397,30,0	1/1:0,26:26:69.24:1214,69,0	1/1:0,14:14:42.11:708,42,0	1/1:0,23:23:66.19:1131,66,0	1/1:0,28:28:81.28:1428,81,0	0/0:31,0:31:90.26:0,90,2014	0/0:30,0:30:84.29:0,84,1984	0/0:20,0:20:60.16:0,60,1354	1/1:2,17:19:48.16:846,48,0	1/1:0,22:22:48.08:780,48,0	1/1:1,7:8:8.56:158,9,0	1/1:1,12:13:20.94:271,21,0	1/1:0,19:19:42.01:641,42,0	1/1:0,14:14:21.49:361,21,0	1/1:0,14:14:39.13:687,39,0	1/1:0,21:21:60.21:1056,60,0	1/1:3,15:18:45.15:777,45,0	1/1:0,6:6:18.06:316,18,0
chr10	59128578	.	C	CAGAGACAAAATATGGAAGGAAAT	2203.03	PASS	AB=0.571;AC=15;AF=0.938;AN=16;BaseQRankSum=-1.123;DP=20;FS=3.274;HRun=0;HaplotypeScore=30.7336;MQ=101.17;MQ0=0;MQRankSum=-1.531;QD=122.39;ReadPosRankSum=0.306;VQSLOD=3.0148;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	1/1:1,0:1:2.99:23,3,0	1/1:1,1:5:15.05:909,15,0	0/1:1,0:4:21.27:706,0,21	./.	./.	./.	1/1:1,0:1:3.01:77,3,0	./.	1/1:1,0:1:3:28,3,0	./.	./.	./.	./.	./.	1/1:2,0:2:6.02:179,6,0	1/1:2,0:2:3.01:105,3,0	./.	1/1:2,0:2:6.02:254,6,0	./.	./.	./.	./.	./.	./.	./.	./.	./.
chr10	59130254	.	T	TAAGAA	33439.77	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-15.285;DP=737;FS=5.080;HRun=0;HaplotypeScore=111.5185;InbreedingCoeff=0.9998;MQ=79.67;MQ0=0;MQRankSum=-7.273;QD=69.81;ReadPosRankSum=3.207;VQSLOD=6.0792;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:96.29:0,96,1881	0/0:15,0:15:39.13:0,39,797	0/0:21,0:21:54.19:0,54,1079	0/0:22,0:22:51.17:0,51,997	0/0:29,0:29:72.25:0,72,1439	1/1:7,21:29:60.21:1831,60,0	1/1:3,9:13:33.11:972,33,0	0/0:32,0:32:75.25:0,75,1495	0/0:25,0:25:72.25:0,72,1450	1/1:4,30:35:93.32:2740,93,0	1/1:2,25:28:75.26:2243,75,0	1/1:4,26:34:77.82:2335,78,0	1/1:4,20:25:60.21:1804,60,0	1/1:5,15:21:42.14:1266,42,0	1/1:4,30:35:84.29:2561,84,0	0/0:36,0:36:99:0,102,2034	0/0:22,0:22:60.18:0,60,1189	0/0:22,0:22:48.16:0,48,966	1/1:4,8:13:27.08:758,27,0	1/1:9,29:38:93.32:2751,93,0	1/1:1,20:22:48.16:1462,48,0	1/1:8,28:36:78.22:2204,78,0	1/1:7,13:21:42.14:1218,42,0	1/1:0,19:19:51.13:1485,51,0	1/1:6,17:23:51.18:1521,51,0	1/1:5,25:31:84.29:2508,84,0	1/1:5,26:31:66.23:1961,66,0	1/1:2,20:25:63.17:1818,63,0
chr10	59135244	.	T	TG	19165.15	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=4.700;DP=765;FS=1.527;HRun=0;HaplotypeScore=117.5997;InbreedingCoeff=0.9993;MQ=84.98;MQ0=0;MQRankSum=-5.777;QD=40.43;ReadPosRankSum=3.999;VQSLOD=4.5449;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,150,2040	0/0:8,0:8:21.07:0,21,291	0/0:32,0:32:95.49:0,95,1235	0/0:22,0:23:55.21:0,55,748	0/0:31,0:31:93.30:0,93,1283	1/1:0,24:24:66.23:1055,66,0	1/1:1,31:32:93.32:1487,93,0	0/0:35,0:35:99:0,102,1426	0/0:22,0:22:66.22:0,66,923	1/1:1,32:33:96.96:1313,97,0	1/1:1,13:14:32.07:451,32,0	1/1:0,34:34:93.32:1487,93,0	1/1:0,24:24:69.24:1103,69,0	1/1:1,22:23:60.11:844,60,0	1/1:0,32:32:81.27:1135,81,0	0/0:32,0:32:96.31:0,96,1325	0/0:32,0:32:96.28:0,96,1305	0/0:25,0:25:75.25:0,75,1048	1/1:0,19:19:57.18:791,57,0	1/1:1,18:19:51.03:693,51,0	1/1:1,37:38:99:1479,105,0	1/1:0,18:18:48.16:767,48,0	1/1:0,23:23:57.19:909,57,0	1/1:0,34:34:96.33:1535,96,0	1/1:0,30:30:84.28:1148,84,0	1/1:0,33:33:99:1338,99,0	1/1:0,30:30:81.27:1117,81,0	1/1:0,14:14:36.12:513,36,0
chr10	59136392	.	A	AG	1085.68	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=0.043;DP=435;FS=14.117;HRun=1;HaplotypeScore=63.6993;InbreedingCoeff=0.8580;MQ=72.83;MQ0=11;MQRankSum=2.996;QD=7.98;ReadPosRankSum=2.004;VQSLOD=-0.5543;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:14:29.80:0,30,219	0/0:4,0:4:11:0,11,86	0/1:39,0:17:5.77:6,0,143	0/0:31,0:19:7.66:0,8,88	0/0:17,0:17:21.73:0,22,232	1/1:12,3:14:38.30:312,38,0	1/1:5,9:16:22.22:163,22,0	0/0:27,0:26:62.36:0,62,540	0/0:11,0:11:23.23:0,23,169	0/0:14,0:13:32.59:0,33,229	0/0:11,0:11:23.73:0,24,167	1/1:1,16:18:6.48:61,6,0	1/1:14,1:15:40.96:301,41,0	0/0:8,0:8:17.81:0,18,128	0/0:15,0:14:23.71:0,24,167	0/0:13,0:13:22.82:0,23,205	0/0:29,0:28:64.68:0,65,514	0/0:21,0:19:29.61:0,30,249	0/0:14,0:13:35.80:0,36,285	0/0:11,0:11:29.83:0,30,232	0/0:8,0:8:17.89:0,18,137	1/1:1,6:7:14.87:131,15,0	1/1:11,2:13:29.47:236,29,0	1/1:9,1:9:8.46:67,8,0	0/0:16,0:16:41.42:0,41,290	0/0:11,0:10:17.80:0,18,130	0/0:18,0:16:41.43:0,41,289	0/0:5,0:4:8.89:0,9,61
chr10	59137889	.	T	TCTCTGAG	10819.34	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-3.617;DP=703;FS=0.409;HRun=0;HaplotypeScore=157.7475;InbreedingCoeff=0.9926;MQ=83.69;MQ0=0;MQRankSum=-15.204;QD=81.96;ReadPosRankSum=3.361;VQSLOD=5.1494;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,28:34:69.24:2749,69,0	0/0:10,0:10:27.08:0,27,649	0/0:18,0:18:54.16:0,54,1197	0/0:28,0:28:71.75:0,72,1557	1/1:4,19:28:47.98:1910,48,0	0/0:15,0:15:39.12:0,39,945	0/0:29,0:29:84.27:0,84,2009	0/0:31,0:31:87.27:0,87,2053	1/1:1,18:20:51.18:2031,51,0	0/0:26,0:26:78.26:0,78,1912	0/0:16,0:16:48.14:0,48,1141	0/0:24,0:24:69.21:0,69,1656	0/0:30,0:30:90.28:0,90,2151	0/0:28,0:28:81.28:0,81,2038	0/0:33,0:33:96.29:0,96,2270	1/1:3,22:33:72.25:2812,72,0	0/0:26,0:26:75.24:0,75,1860	1/1:5,9:17:33.11:1317,33,0	0/0:34,0:34:93.30:0,93,2191	0/0:28,0:28:81:0,81,1940	0/0:40,0:40:99:0,114,2792	0/0:22,0:22:63.20:0,63,1569	0/0:20,0:20:57.16:0,57,1359	0/0:40,0:40:99:0,117,2878	0/0:19,0:19:51.18:0,51,1324	0/0:29,0:29:81.28:0,81,2074	0/0:21,0:21:63.20:0,63,1541	0/0:4,0:4:12.04:0,12,312
chr10	59139223	.	TC	T	4502.56	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=17.530;DP=840;FS=2.959;HRun=6;HaplotypeScore=110.8909;InbreedingCoeff=0.9995;MQ=63.41;MQ0=15;MQRankSum=-0.400;QD=27.12;ReadPosRankSum=2.316;VQSLOD=4.5430;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,54:57:99:1510,141,0	0/0:10,0:10:30.10:0,30,395	0/0:39,0:17:36.02:0,36,419	0/0:39,0:24:26.54:0,27,397	1/1:4,30:32:84.20:894,84,0	0/0:19,0:19:54.17:0,54,705	0/0:32,0:32:87.25:0,87,1100	0/0:30,0:29:54.08:0,54,648	1/1:3,19:22:51.12:543,51,0	0/0:32,0:32:90.29:0,90,1177	0/0:36,0:36:99:0,102,1330	0/0:33,0:33:93.28:0,93,1195	0/0:30,0:30:90.29:0,90,1182	0/0:33,0:33:87.26:0,87,1115	0/0:28,0:27:72.71:0,73,948	1/1:2,27:29:81.20:864,81,0	0/0:33,0:33:94.83:0,95,1209	1/1:3,21:24:66.08:692,66,0	0/0:23,0:21:54.15:0,54,667	0/0:35,0:34:96.31:0,96,1257	0/0:36,0:36:99:0,105,1332	0/0:26,0:26:72.22:0,72,929	0/0:28,0:28:81.24:0,81,1031	0/0:32,0:32:90.23:0,90,1149	0/0:31,0:31:87.27:0,87,1132	0/0:29,0:27:72.21:0,72,917	0/0:24,0:24:69.20:0,69,881	0/0:14,0:14:33.07:0,33,390
chr10	59140483	.	TAGGA	T	6328.29	PASS	AB=0.557;AC=13;AF=0.232;AN=56;BaseQRankSum=14.678;DP=732;FS=2.194;HRun=0;HaplotypeScore=117.2391;InbreedingCoeff=0.9014;MQ=85.89;MQ0=0;MQRankSum=-4.558;QD=38.12;ReadPosRankSum=2.756;VQSLOD=4.7714;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:41:99:0,117,2930	0/0:11,0:11:30.10:0,30,774	0/0:34,0:33:62.40:0,62,1441	0/0:25,0:24:55.88:0,56,1353	0/0:33,0:33:90.30:0,90,2249	1/1:1,31:32:84.29:1477,84,0	1/1:2,18:20:30.10:534,30,0	0/0:27,0:27:69.23:0,69,1698	0/0:28,0:28:81.28:0,81,2051	0/0:31,0:31:84.29:0,84,2159	0/0:19,0:19:57.20:0,57,1424	0/1:7,27:34:17.25:940,0,17	1/1:2,31:33:75.26:1320,75,0	0/0:29,0:29:81.28:0,81,2039	0/0:35,0:35:90.30:0,90,2263	0/0:36,1:37:52.08:0,52,2507	0/0:23,0:23:63.22:0,63,1552	0/0:25,0:25:72.23:0,72,1755	0/0:23,0:23:57.20:0,57,1466	0/0:22,0:22:60.21:0,60,1549	0/0:28,0:28:75.26:0,75,1836	1/1:2,10:12:33.11:562,33,0	1/1:5,11:16:36.12:641,36,0	1/1:1,18:19:48.16:854,48,0	0/0:25,0:25:69.24:0,69,1748	0/0:32,0:32:84.29:0,84,2138	0/0:26,0:26:69.21:0,69,1644	0/0:11,0:11:30.10:0,30,758
chr10	59143909	.	GT	G	2124.90	PASS	AB=0.891;AC=23;AF=0.411;AN=56;BaseQRankSum=1.869;DP=579;FS=1.277;HRun=13;HaplotypeScore=76.7482;InbreedingCoeff=0.7373;MQ=72.01;MQ0=4;MQRankSum=0.045;QD=8.33;ReadPosRankSum=1.727;VQSLOD=3.0093;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,3:41:52.12:0,52,807	1/1:1,3:4:8.95:66,9,0	0/1:22,2:13:32.80:33,0,65	0/0:21,0:13:12.25:0,12,77	0/0:22,2:26:31.56:0,32,404	1/1:2,14:16:38.77:284,39,0	1/1:8,18:26:19.42:301,19,0	1/1:16,12:25:29.69:218,30,0	0/0:23,0:23:59.77:0,60,566	0/1:23,3:28:1.84:2,0,316	0/0:10,0:12:29.87:0,30,271	1/1:4,17:20:29.77:219,30,0	1/1:3,15:19:34.81:247,35,0	0/0:16,2:18:8.86:0,9,228	0/0:24,0:24:54.07:0,54,514	0/0:21,1:22:26.08:0,26,399	1/1:4,3:7:2.92:22,3,0	0/0:12,0:13:26.86:0,27,241	0/0:20,0:22:37.93:0,38,486	0/0:17,1:21:23.99:0,24,359	0/0:15,0:15:28.91:0,29,339	1/1:6,17:23:19.88:318,20,0	1/1:8,11:20:5.60:195,6,0	1/1:4,23:28:35.55:415,36,0	0/0:15,1:16:10.97:0,11,250	0/0:30,1:33:33.96:0,34,593	0/0:14,0:14:24.04:0,24,234	0/1:8,2:11:13.93:14,0,179
chr10	59145393	.	AGAG	A	169.12	PASS	AB=0.959;AC=10;AF=0.192;AN=52;BaseQRankSum=0.614;DP=428;FS=13.474;HRun=0;HaplotypeScore=65.4707;InbreedingCoeff=-0.0964;MQ=24.90;MQ0=67;MQRankSum=-2.293;QD=1.12;ReadPosRankSum=-2.549;VQSLOD=-0.1811;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:8:2.75:38,3,0	0/0:12,0:11:15.42:0,15,184	./.	./.	0/0:20,0:17:3.01:0,3,46	0/1:22,0:16:26.64:43,0,27	0/0:12,0:10:4.18:0,4,182	0/0:24,0:16:10.76:0,11,282	0/0:10,0:5:5.92:0,6,56	0/1:17,1:11:25.91:26,0,274	0/0:13,0:12:2.97:0,3,20	0/1:10,0:7:0.06:0,0,47	0/0:10,0:8:3.60:0,4,70	0/0:11,0:7:0.21:0,0,0	0/0:11,1:12:4.34:0,4,45	0/0:8,0:6:0:0,0,0	0/1:13,0:7:9.81:10,0,127	0/0:5,0:4:2.60:0,3,69	0/1:15,4:14:99:135,0,201	0/1:12,1:13:13.92:22,0,14	0/0:17,0:9:11.82:0,12,187	0/0:16,0:11:3.01:0,3,68	0/0:17,0:13:6:0,6,108	0/1:8,0:5:1.18:1,0,53	0/0:23,0:14:2.53:0,3,170	0/1:36,1:26:10.98:11,0,776	0/0:12,0:5:9.03:0,9,132	0/0:14,0:10:16.24:0,16,213
chr10	59145585	.	GGGT	G	1442.99	PASS	AB=0.836;AC=25;AF=0.463;AN=54;BaseQRankSum=0.272;DP=552;FS=9.856;HRun=0;HaplotypeScore=85.5567;InbreedingCoeff=-0.3221;MQ=33.37;MQ0=46;MQRankSum=-0.730;QD=4.75;ReadPosRankSum=-0.018;VQSLOD=0.9797;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:7,10:16:3.18:51,0,3	0/1:11,3:12:45.96:46,0,46	0/0:82,0:8:2.19:0,2,8	0/0:105,0:10:1.12:0,1,70	0/0:10,7:15:0:0,0,0	0/1:9,5:8:14.14:48,0,14	0/1:9,1:10:11.39:124,0,11	0/1:38,3:36:99:116,0,455	1/1:11,2:11:9.16:159,9,0	0/1:11,3:13:89.07:89,0,133	./.	0/0:1,6:7:6.09:0,6,55	0/1:5,1:6:25.48:147,0,25	0/1:5,3:5:0.41:0,0,1	0/1:11,3:13:28.60:51,0,29	1/1:3,9:11:6.78:106,7,0	0/1:6,1:5:3.04:81,0,3	1/1:1,0:1:3.01:55,3,0	0/1:14,1:14:38.10:38,0,117	0/1:17,4:20:61.64:94,0,62	0/0:8,4:11:2.04:0,2,6	0/1:5,4:7:0:0,0,0	0/0:9,1:10:2.96:0,3,19	1/1:4,2:5:3.01:47,3,0	0/1:15,10:23:15.07:46,0,15	0/1:29,2:27:99:168,0,367	0/1:11,1:11:28.34:96,0,28	0/1:12,0:11:17.88:18,0,162
chr10	59145586	.	GGT	G	1215.26	PASS	AB=0.895;AC=41;AF=0.788;AN=52;BaseQRankSum=1.444;DP=542;FS=0.000;HRun=0;HaplotypeScore=81.7930;InbreedingCoeff=0.1574;MQ=33.73;MQ0=46;MQRankSum=-0.405;QD=2.43;ReadPosRankSum=0.830;VQSLOD=1.0441;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:14,3:16:7.14:40,7,0	1/1:11,3:12:0.02:14,0,0	0/1:76,1:5:2.61:3,0,3	0/1:102,2:9:19.43:19,0,47	0/1:13,4:15:0:0,0,0	0/1:10,3:7:10.93:11,0,14	0/1:8,1:9:4.72:40,0,5	1/1:36,6:37:38.04:382,38,0	1/1:12,2:12:13.59:71,14,0	1/1:13,1:13:18.45:106,18,0	./.	0/0:7,0:7:5.48:0,5,30	1/1:6,0:6:8.54:44,9,0	0/1:7,1:5:0.05:0,0,0	1/1:13,1:13:5.85:37,6,0	1/1:10,1:10:8.62:45,9,0	1/1:7,1:5:5.98:54,6,0	1/1:2,0:2:2.92:17,3,0	1/1:14,1:14:14.56:69,15,0	1/1:20,2:20:6.86:32,7,0	0/0:11,1:11:0.94:0,1,2	./.	1/1:9,1:10:0.31:1,0,0	1/1:4,2:5:2.68:11,3,0	1/1:21,2:21:4.01:41,4,0	0/1:26,4:26:99:210,0,117	1/1:11,1:11:8.96:44,9,0	1/1:11,0:10:6.33:45,6,0
chr10	59146655	.	CGTGTGTGTGTGTGTGTGT	C	4726	PASS	AB=0.801;AC=18;AF=0.321;AN=56;BaseQRankSum=10.069;DP=625;FS=10.781;HRun=0;HaplotypeScore=310.9014;InbreedingCoeff=0.6214;MQ=65.77;MQ0=15;MQRankSum=-9.568;QD=19.13;ReadPosRankSum=1.774;VQSLOD=2.1918;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:31,0:38:19.40:19,0,384	0/0:7,0:11:18.06:0,18,1183	0/0:27,0:21:6.02:0,6,143	0/0:27,0:18:12.04:0,12,481	0/0:19,0:21:19.33:0,19,308	1/1:11,5:17:12.04:549,12,0	1/1:18,2:19:5.85:145,6,0	0/0:25,0:22:20.65:0,21,653	0/1:18,0:29:99:109,0,341	0/0:25,0:28:30.10:0,30,1562	0/0:9,0:11:27.09:0,27,1524	1/1:14,7:22:18.06:855,18,0	1/1:9,7:17:21.07:1002,21,0	0/0:14,0:24:33.11:0,33,1986	0/0:14,0:17:27.06:0,27,1301	0/1:12,0:16:9.58:10,0,162	0/0:25,0:37:42.61:0,43,2513	0/1:22,0:27:16.56:17,0,434	0/0:18,0:19:23.56:0,24,1100	0/0:14,0:14:27.09:0,27,1725	0/0:24,0:36:45.15:0,45,2445	1/1:8,9:17:18.06:785,18,0	1/1:9,4:14:14.94:673,15,0	1/1:21,7:28:12.04:563,12,0	0/0:13,0:17:18.06:0,18,982	0/0:29,0:28:36.12:0,36,2047	0/0:21,0:20:33.11:0,33,2306	0/0:7,0:12:18.06:0,18,1193
chr10	59146657	.	TGTGTGTGTGTG	T	3675.89	PASS	AB=0.924;AC=12;AF=0.214;AN=56;BaseQRankSum=12.858;DP=624;FS=7.577;HRun=0;HaplotypeScore=231.9275;InbreedingCoeff=-0.2719;MQ=63.05;MQ0=16;MQRankSum=-11.399;QD=13.82;ReadPosRankSum=5.306;VQSLOD=1.2348;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:30,7:37:99:395,0,248	0/0:13,0:13:33.11:0,33,1119	0/0:24,0:18:50.98:0,51,607	0/0:27,0:18:51.15:0,51,689	0/1:19,3:21:99:127,0,195	0/1:16,0:16:99:218,0,253	0/1:20,0:19:15.11:15,0,383	0/0:28,0:24:69.01:0,69,1063	0/1:17,9:27:99:783,0,219	0/0:30,0:30:86.77:0,87,1924	0/0:11,0:11:33.11:0,33,991	0/1:22,0:22:99:360,0,263	0/1:17,0:17:99:428,0,224	0/0:21,0:21:46.03:0,46,1323	0/0:15,0:15:42.12:0,42,1002	0/1:13,3:17:81.52:314,0,82	0/0:36,0:36:69.69:0,70,2064	0/1:22,4:27:99:266,0,254	0/0:22,0:22:64.25:0,64,1413	0/0:14,0:14:35.66:0,36,1275	0/0:34,0:34:78.25:0,78,1869	0/1:17,0:17:99:279,0,158	0/1:15,0:14:99:291,0,161	0/1:28,0:28:99:200,0,395	0/0:17,0:17:39.13:0,39,801	0/0:31,0:29:87.27:0,87,2085	0/0:21,0:20:57.19:0,57,1827	0/0:14,0:14:30.10:0,30,1026
chr10	59147299	.	T	TAA	3467.15	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-10.352;DP=532;FS=8.436;HRun=7;HaplotypeScore=64.8866;InbreedingCoeff=0.9800;MQ=77.77;MQ0=1;MQRankSum=-0.561;QD=35.02;ReadPosRankSum=3.053;VQSLOD=3.0266;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,22:26:51.17:813,51,0	0/0:10,0:10:24.07:0,24,280	0/0:14,0:10:12.97:0,13,92	0/0:20,0:17:13.68:0,14,89	1/1:3,27:30:77.63:1219,78,0	0/0:18,0:18:46.04:0,46,501	0/0:23,0:23:57.16:0,57,659	0/0:22,0:22:57.17:0,57,663	1/1:4,9:13:27.05:408,27,0	0/0:25,0:25:69.19:0,69,794	0/0:14,0:14:39.11:0,39,454	0/0:21,0:21:51.12:0,51,573	0/0:18,0:18:51.13:0,51,583	0/0:21,0:21:60.15:0,60,677	0/0:21,0:21:51.13:0,51,582	1/1:3,10:13:27.09:440,27,0	0/0:24,0:24:69.17:0,69,790	1/1:2,13:16:36.12:587,36,0	0/0:26,0:26:57.16:0,57,663	0/0:19,0:19:51.15:0,51,594	0/0:10,0:10:27.08:0,27,314	0/0:18,0:18:51.15:0,51,594	0/0:26,0:27:71.95:0,72,816	0/0:8,0:8:21.06:0,21,245	0/0:16,0:16:39.11:0,39,454	0/0:32,0:32:87.21:0,87,997	0/0:19,0:18:51.10:0,51,568	0/0:7,0:7:12.03:0,12,140
chr10	59151875	.	TGG	T	2526.41	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=1.231;DP=290;FS=17.800;HRun=11;HaplotypeScore=48.2278;InbreedingCoeff=0.8979;MQ=75.96;MQ0=2;MQRankSum=-0.601;QD=15.69;ReadPosRankSum=5.494;VQSLOD=0.3327;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,11:15:36.08:383,36,0	1/1:1,0:7:10.98:48,11,0	0/0:15,0:13:15.05:0,15,217	0/0:8,0:8:8.60:0,9,83	1/1:2,2:4:9.02:96,9,0	1/1:0,7:7:18.05:192,18,0	1/1:3,6:9:15.03:160,15,0	1/1:5,0:22:32.37:158,32,0	1/1:6,6:10:17.97:179,18,0	0/0:8,0:9:17.49:0,17,200	0/0:9,0:9:15.04:0,15,211	1/1:2,9:11:8.79:293,9,0	1/1:5,9:14:27.06:285,27,0	0/0:13,0:13:24.07:0,24,336	0/0:8,0:8:18.03:0,18,225	1/1:3,9:13:23.78:229,24,0	1/1:1,0:14:27.44:120,27,0	1/1:6,5:11:18.03:191,18,0	0/0:5,0:5:11.53:0,12,139	0/0:11,0:11:17.95:0,18,243	0/0:10,0:11:20.47:0,20,261	1/1:1,8:9:24.06:255,24,0	1/1:3,3:6:6.01:64,6,0	1/1:3,4:7:9.02:96,9,0	0/0:5,0:5:3.01:0,3,46	0/0:11,0:13:17.52:0,18,196	0/0:16,0:16:42.02:0,42,498	0/0:5,0:5:12.04:0,12,184
chr10	59151885	.	GGT	G	640.75	PASS	AB=0.939;AC=15;AF=0.268;AN=56;BaseQRankSum=4.927;DP=283;FS=5.654;HRun=0;HaplotypeScore=52.2367;InbreedingCoeff=0.2228;MQ=70.43;MQ0=2;MQRankSum=1.105;QD=5.52;ReadPosRankSum=7.129;VQSLOD=1.2553;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:19,1:20:85.36:85,0,102	0/0:6,0:6:9.12:0,9,34	0/0:11,0:9:18.05:0,18,244	0/0:9,0:8:20.94:0,21,212	1/1:3,0:3:7.18:26,7,0	0/1:9,0:9:27.66:41,0,28	0/1:8,0:8:19.61:31,0,20	0/0:26,0:26:42.62:0,43,309	1/1:6,2:6:16.45:116,16,0	0/0:6,0:6:17.94:0,18,213	0/0:10,0:10:27.02:0,27,324	0/1:14,1:15:47.28:98,0,47	0/1:11,1:12:18.92:125,0,19	0/0:10,0:10:30.07:0,30,423	0/0:6,0:6:17.27:0,17,191	0/1:11,1:12:3.61:84,0,4	0/0:13,0:13:18.62:0,19,68	0/1:6,4:10:4.37:82,0,4	0/0:7,0:7:18.02:0,18,217	0/0:13,0:13:38.89:0,39,432	0/0:10,0:10:26.86:0,27,343	1/1:8,0:8:19.33:72,19,0	0/1:6,0:6:22.55:23,0,60	0/1:5,0:5:10.85:31,0,11	0/0:6,0:6:17.99:0,18,175	0/0:10,0:10:20.91:0,21,190	0/0:20,0:20:59.82:0,60,689	0/0:4,0:4:12.01:0,12,144
chr10	59155512	.	CGTGT	C	4416.17	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=3.572;DP=704;FS=0.000;HRun=0;HaplotypeScore=155.3605;InbreedingCoeff=0.9986;MQ=70.36;MQ0=0;MQRankSum=-2.000;QD=29.64;ReadPosRankSum=4.556;VQSLOD=4.4966;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:12,27:39:54.18:938,54,0	0/0:13,0:13:23.16:0,23,314	0/0:39,0:31:82.49:0,82,1629	0/0:32,0:29:48.02:0,48,1301	1/1:8,17:25:42.46:639,42,0	0/0:25,0:25:54.17:0,54,881	0/0:27,0:27:45.13:0,45,736	0/0:31,0:31:23.89:0,24,814	1/1:6,21:27:48.16:821,48,0	0/0:22,0:22:57.16:0,57,1127	0/0:19,0:19:48.14:0,48,1060	0/0:21,0:21:45.14:0,45,744	0/0:25,0:25:48.55:0,49,720	0/0:21,0:24:62.95:0,63,1484	0/0:24,0:24:69.15:0,69,1575	1/1:7,30:37:69.24:1199,69,0	0/0:31,0:31:32.61:0,33,733	1/1:4,17:21:48.16:820,48,0	0/0:25,0:26:72.02:0,72,1522	0/0:20,0:20:48.14:0,48,972	0/0:40,0:41:79.90:0,80,1853	0/0:16,0:16:36.10:0,36,592	0/0:14,0:14:29.59:0,30,476	0/0:25,0:25:54.17:0,54,906	0/0:20,0:19:54.15:0,54,1147	0/0:25,0:25:66.21:0,66,1494	0/0:23,0:23:57.20:0,57,1384	0/0:11,0:12:35.67:0,36,631
chr10	59155523	.	GTGT	G	1964.61	PASS	AB=0.969;AC=8;AF=0.143;AN=56;BaseQRankSum=9.777;DP=673;FS=0.883;HRun=0;HaplotypeScore=139.5454;InbreedingCoeff=0.6888;MQ=70.07;MQ0=2;MQRankSum=-3.075;QD=14.77;ReadPosRankSum=5.812;VQSLOD=2.8267;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:30:7.87:406,0,8	0/0:13,0:13:23.29:0,23,261	0/0:43,0:33:94.15:0,94,1647	0/0:33,0:29:71.65:0,72,1346	1/1:19,1:20:19.49:347,19,0	0/0:28,0:28:54.17:0,54,944	0/0:25,0:24:45.14:0,45,782	0/0:28,0:28:70.22:0,70,843	0/1:28,2:30:43.25:364,0,43	0/0:22,0:22:66.16:0,66,1122	0/0:18,0:18:49.57:0,50,949	0/0:20,0:20:45.14:0,45,791	0/0:22,0:22:48.46:0,48,758	0/0:26,0:26:70.77:0,71,1430	0/0:26,0:26:75.15:0,75,1522	1/1:30,1:31:68.99:601,69,0	0/0:26,0:26:65.86:0,66,690	1/1:22,0:21:5.13:393,5,0	0/0:28,0:28:83.27:0,83,1558	0/0:19,0:19:51.13:0,51,929	0/0:33,0:33:56.47:0,56,1673	0/0:17,0:16:36.10:0,36,614	0/0:14,0:14:29.79:0,30,510	0/0:24,0:24:54.17:0,54,956	0/0:18,0:18:54.15:0,54,1054	0/0:24,0:24:69.23:0,69,1395	0/0:21,0:21:57.19:0,57,1242	0/0:12,0:12:33.96:0,34,577
chr10	59155526	.	TGG	T	1575.33	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=0.922;DP=673;FS=1.646;HRun=9;HaplotypeScore=128.2859;InbreedingCoeff=0.9130;MQ=69.64;MQ0=2;MQRankSum=1.938;QD=23.51;ReadPosRankSum=0.258;VQSLOD=2.4868;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:61.73:0,62,311	1/1:3,10:13:18.52:209,19,0	0/0:37,1:30:59.12:0,59,771	0/0:32,0:28:62.85:0,63,794	0/0:21,0:21:3.33:0,3,84	0/0:25,0:27:21.66:0,22,80	0/0:25,0:25:22.26:0,22,83	1/1:4,27:31:79.64:820,80,0	0/0:30,0:30:42.73:0,43,258	0/0:20,0:20:48.08:0,48,672	0/0:17,0:18:50.52:0,51,687	0/0:18,0:19:30.01:0,30,99	0/0:17,0:19:14.25:0,14,62	0/0:31,0:31:70.32:0,70,1075	0/0:26,0:26:69.18:0,69,1032	0/0:32,0:32:59.37:0,59,254	1/1:7,16:23:63.12:688,63,0	0/0:23,0:22:48.97:0,49,286	0/0:28,0:28:62.17:0,62,964	0/0:19,0:19:42.08:0,42,568	0/0:28,0:28:43.23:0,43,962	0/0:17,0:16:32.99:0,33,287	0/0:11,0:13:11.87:0,12,43	0/0:24,0:24:36.55:0,37,112	0/0:19,0:19:45.12:0,45,669	0/0:27,0:27:69.17:0,69,991	0/0:25,0:25:69.18:0,69,1014	0/0:8,0:10:12.37:0,12,299
chr10	59155527	.	G	GT	3643.63	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=0.995;DP=672;FS=0.421;HRun=1;HaplotypeScore=115.0766;InbreedingCoeff=0.9992;MQ=70.30;MQ0=2;MQRankSum=-0.886;QD=24.45;ReadPosRankSum=4.774;VQSLOD=3.6725;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:68:0,68,479	0/0:13,0:13:23.69:0,24,138	0/0:40,0:31:73.50:0,74,770	0/0:32,0:28:62.71:0,63,758	0/0:22,0:22:38.84:0,39,263	1/1:2,25:27:50.95:631,51,0	1/1:1,25:25:42.05:537,42,0	0/0:31,0:31:73.40:0,73,432	0/0:30,0:30:56.04:0,56,400	0/0:20,0:20:57:0,57,666	0/0:18,0:18:53.59:0,54,641	1/1:2,17:19:40.01:523,40,0	1/1:2,17:19:38.67:466,39,0	0/0:32,0:32:84.14:0,84,1028	0/0:26,0:26:78.18:0,78,963	0/0:32,0:32:67.67:0,68,407	0/0:22,0:22:60.15:0,60,345	0/0:23,0:22:54.01:0,54,357	0/0:27,0:27:78.17:0,78,956	0/0:16,0:16:39.07:0,39,460	0/0:26,0:26:68.81:0,69,903	1/1:4,16:19:33.10:471,33,0	1/1:3,11:14:26.79:336,27,0	1/1:0,24:24:51.17:680,51,0	0/0:19,0:19:50.34:0,50,615	0/0:26,0:26:75.20:0,75,941	0/0:25,0:25:69.13:0,69,867	0/0:10,0:10:28.99:0,29,313
chr10	59156028	.	AGTGTGT	A	234.28	PASS	AC=8;AF=0.174;AN=46;BaseQRankSum=4.493;DP=494;FS=21.506;HRun=0;HaplotypeScore=97.0996;InbreedingCoeff=0.4760;MQ=66.69;MQ0=6;MQRankSum=-2.537;QD=2.76;ReadPosRankSum=0.830;VQSLOD=0.2067;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:30:3.01:42,3,0	0/0:9,0:9:9.03:0,9,151	./.	./.	./.	0/0:18,0:18:0:0,0,0	0/0:18,0:18:6.02:0,6,80	./.	1/1:15,0:18:5.76:84,6,0	0/0:11,0:10:6.02:0,6,96	0/0:6,0:6:6.02:0,6,84	0/0:18,0:19:2.10:0,2,23	0/0:17,0:17:0.47:0,0,1	0/0:21,0:22:15.50:0,16,265	0/0:18,0:19:12.01:0,12,183	1/1:13,6:20:12.03:218,12,0	0/0:20,0:20:21.04:0,21,452	0/0:22,0:22:0.47:0,0,1	0/0:24,0:24:6.01:0,6,122	0/0:6,0:7:3.01:0,3,42	0/0:39,0:37:18.04:0,18,254	./.	0/0:8,0:7:3.01:0,3,39	1/1:15,0:17:0.88:2,1,0	0/0:15,0:13:6.01:0,6,121	0/0:16,0:16:6.91:0,7,137	0/0:7,0:7:6.02:0,6,127	0/0:16,0:16:9.02:0,9,154
chr10	59156428	.	A	AG	8287.32	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-5.658;DP=755;FS=1.329;HRun=2;HaplotypeScore=83.5741;InbreedingCoeff=0.9972;MQ=88.35;MQ0=0;MQRankSum=-0.199;QD=38.73;ReadPosRankSum=2.325;VQSLOD=5.4206;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,51:54:99:2028,141,0	1/1:0,11:11:27.09:388,27,0	0/0:33,0:33:90.68:0,91,1038	0/0:24,0:24:56.33:0,56,630	1/1:0,15:15:42.14:604,42,0	0/0:24,0:24:69.22:0,69,854	0/0:36,0:36:99:0,105,1301	1/1:2,24:26:72.21:998,72,0	1/1:1,31:32:90.30:1289,90,0	0/0:34,0:34:99:0,99,1212	0/0:22,0:22:63.20:0,63,780	0/0:24,0:24:72.23:0,72,892	0/0:29,0:29:81.25:0,81,1003	0/0:39,0:39:99:0,114,1382	0/0:34,0:34:99:0,102,1264	1/1:2,16:18:48.16:691,48,0	1/1:2,23:25:63.21:907,63,0	1/1:0,33:33:96.32:1382,96,0	0/0:24,0:24:72.19:0,72,858	0/0:7,0:7:15.05:0,15,186	0/0:42,0:42:99:0,126,1517	0/0:19,0:19:57.16:0,57,693	0/0:19,0:19:51.13:0,51,605	0/0:29,0:29:78.24:0,78,967	0/0:28,0:27:81.21:0,81,982	0/0:30,0:30:87.27:0,87,1078	0/0:31,0:31:93.28:0,93,1140	0/0:13,0:13:39.03:0,39,433
chr10	59161222	.	GC	G	761.10	PASS	AB=0.906;AC=13;AF=0.232;AN=56;BaseQRankSum=3.961;DP=472;FS=0.561;HRun=11;HaplotypeScore=53.2682;InbreedingCoeff=0.2345;MQ=76.79;MQ0=0;MQRankSum=-0.507;QD=4.56;ReadPosRankSum=3.931;VQSLOD=0.2561;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:24,2:26:7.18:7,0,327	1/1:0,6:6:14.98:123,15,0	0/0:15,0:14:9.93:0,10,57	0/0:12,1:13:11.79:0,12,85	0/1:11,2:13:7.50:8,0,133	0/0:20,0:20:45.06:0,45,453	0/0:18,1:19:8.44:0,8,295	1/1:14,4:18:2.28:8,2,0	0/1:11,1:12:0.63:1,0,176	0/0:13,0:14:20.87:0,21,199	0/1:11,1:12:6.66:7,0,113	0/0:14,1:15:2.39:0,2,211	0/0:14,0:14:20.95:0,21,190	0/0:22,0:22:42.55:0,43,428	0/0:17,0:17:33.04:0,33,328	0/0:9,1:20:4.82:0,5,176	1/1:5,35:42:64.93:719,65,0	0/0:37,4:41:22.79:0,23,611	0/0:9,0:9:15.04:0,15,160	0/1:12,1:13:12.15:12,0,76	0/0:17,0:17:35.96:0,36,349	0/0:13,0:13:20.99:0,21,195	0/1:6,1:7:15.63:16,0,48	0/1:16,2:18:10.18:10,0,304	0/0:13,0:13:12.01:0,12,118	0/0:11,0:11:15.04:0,15,160	0/0:15,1:16:8.41:0,8,279	0/0:16,0:16:14.92:0,15,118
chr10	59162313	.	TATA	T	4027.46	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=12.846;DP=699;FS=0.000;HRun=0;HaplotypeScore=103.9491;InbreedingCoeff=0.9994;MQ=93.48;MQ0=0;MQRankSum=-7.585;QD=30.28;ReadPosRankSum=4.460;VQSLOD=3.9527;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,31:34:59.81:980,60,0	0/0:12,0:12:36.12:0,36,781	0/0:33,0:33:93.29:0,93,1892	0/0:27,0:27:74.47:0,74,1512	1/1:1,29:30:45.11:706,45,0	0/0:32,0:32:87.30:0,87,1942	0/0:20,0:20:57.20:0,57,1274	0/0:39,0:39:96.32:0,96,2035	1/1:3,16:19:36.10:587,36,0	0/0:25,0:25:75.25:0,75,1625	0/0:22,0:22:57.20:0,57,1237	0/0:21,0:21:63.22:0,63,1370	0/0:32,0:32:96.31:0,96,2043	0/0:23,0:23:63.22:0,63,1405	0/0:25,0:25:69.24:0,69,1524	1/1:1,20:21:39.13:637,39,0	0/0:29,0:29:84.29:0,84,1853	1/1:1,28:29:69.24:1117,69,0	0/0:21,0:21:63.21:0,63,1354	0/0:25,0:25:69.22:0,69,1447	0/0:29,0:29:72.25:0,72,1593	0/0:31,0:31:90.31:0,90,1967	0/0:19,0:19:54.16:0,54,1158	0/0:19,0:19:54.19:0,54,1167	0/0:13,0:13:39.13:0,39,870	0/0:30,0:30:84.29:0,84,1858	0/0:31,0:31:90.31:0,90,1948	0/0:8,0:8:24.08:0,24,529
chr10	59163461	.	C	CA	7963.03	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-10.333;DP=750;FS=4.062;HRun=1;HaplotypeScore=87.8885;InbreedingCoeff=1.0000;MQ=78.70;MQ0=0;MQRankSum=-1.832;QD=33.74;ReadPosRankSum=2.570;VQSLOD=4.7500;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,38:38:81.27:1213,81,0	1/1:0,13:13:36.12:539,36,0	0/0:19,0:19:54.12:0,54,641	0/0:20,0:20:51.12:0,51,620	1/1:5,36:41:92.59:970,93,0	0/0:23,0:23:66.20:0,66,842	0/0:24,0:24:72.18:0,72,878	1/1:7,23:30:66.17:927,66,0	1/1:1,29:30:66.22:987,66,0	0/0:26,0:26:72.17:0,72,853	0/0:24,0:24:68.74:0,69,765	0/0:33,0:33:99:0,99,1268	0/0:26,0:26:75.24:0,75,971	0/0:22,0:22:63.17:0,63,787	0/0:33,0:33:99:0,99,1243	1/1:1,23:24:69.23:1034,69,0	1/1:1,39:40:99:1463,99,0	1/1:1,19:20:57.16:830,57,0	0/0:23,0:23:60.16:0,60,739	0/0:20,0:20:54.09:0,54,614	0/0:52,0:52:99:0,150,1820	0/0:24,0:24:72.13:0,72,821	0/0:20,0:20:48.09:0,48,550	0/0:34,0:34:99:0,102,1304	0/0:15,0:15:42.09:0,42,490	0/0:29,0:29:81.23:0,81,992	0/0:29,0:29:87.26:0,87,1101	0/0:18,0:18:54.16:0,54,685
chr10	59163657	.	CT	C	3122.78	PASS	AB=0.909;AC=15;AF=0.268;AN=56;BaseQRankSum=9.114;DP=605;FS=7.931;HRun=10;HaplotypeScore=63.7321;InbreedingCoeff=0.9009;MQ=79.41;MQ0=0;MQRankSum=-1.253;QD=19.28;ReadPosRankSum=2.464;VQSLOD=4.4991;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:32:87.07:0,87,923	0/0:17,0:17:48.09:0,48,505	0/0:19,0:19:13.61:0,14,154	0/1:9,1:10:16.63:17,0,46	0/0:25,0:25:53.99:0,54,563	1/1:5,14:20:44.01:370,44,0	1/1:1,23:24:65.99:573,66,0	0/0:28,1:29:31.08:0,31,558	0/0:24,0:24:57.12:0,57,613	0/0:21,0:23:53.80:0,54,539	0/0:17,0:17:44.95:0,45,476	1/1:1,27:28:74.98:651,75,0	1/1:1,21:22:50.99:443,51,0	0/0:21,0:21:54.15:0,54,597	0/0:30,1:31:58.19:0,58,870	0/0:15,1:16:19.07:0,19,431	0/0:20,0:20:60.16:0,60,664	0/0:16,0:16:39.06:0,39,418	0/0:16,0:16:30.95:0,31,323	0/0:15,1:16:16.06:0,16,405	0/0:20,0:21:50.96:0,51,537	1/1:2,14:16:41.99:365,42,0	1/1:3,16:19:17.94:383,18,0	1/1:1,22:23:59.99:521,60,0	0/0:25,0:25:69.16:0,69,741	0/0:34,2:39:31.61:0,32,747	0/0:27,1:28:52.14:0,52,793	0/0:7,0:7:18.05:0,18,199
chr10	59163785	.	TAC	T	949.53	PASS	AB=0.902;AC=33;AF=0.660;AN=50;BaseQRankSum=7.091;DP=527;FS=11.515;HRun=0;HaplotypeScore=76.0891;InbreedingCoeff=-0.0035;MQ=58.42;MQ0=11;MQRankSum=-1.568;QD=2.45;ReadPosRankSum=-0.017;VQSLOD=0.7652;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:28:0:0,0,0	1/1:2,0:3:5.68:28,6,0	./.	./.	1/1:10,0:14:0.88:2,1,0	1/1:16,0:25:5.68:28,6,0	0/1:15,5:20:1.36:85,0,1	./.	1/1:12,0:22:5.13:22,5,0	0/1:18,2:19:63.60:64,0,118	0/1:9,1:11:31.41:31,0,96	1/1:13,10:24:18.76:177,19,0	1/1:7,5:12:5.85:64,6,0	0/0:16,0:16:21:0,21,244	0/0:21,2:23:3.30:0,3,338	1/1:11,0:17:8.52:42,9,0	1/1:18,0:29:8.52:42,9,0	1/1:5,0:8:5.48:28,5,0	0/1:16,2:18:49.67:50,0,64	0/1:19,2:21:35.42:52,0,35	0/1:38,1:39:29.63:30,0,420	1/1:10,3:13:10.31:80,10,0	1/1:5,0:4:3.01:32,3,0	1/1:14,10:24:3.98:155,4,0	0/1:15,0:16:13.99:17,0,14	0/1:27,3:30:47.10:47,0,366	0/0:16,0:16:15.05:0,15,221	0/1:12,1:12:19.42:19,0,55
chr10	59164434	.	CAGAGAG	C	1732.58	PASS	AC=14;AF=0.269;AN=52;BaseQRankSum=3.711;DP=457;FS=22.330;HRun=0;HaplotypeScore=101.1765;InbreedingCoeff=0.8873;MQ=71.38;MQ0=7;MQRankSum=-8.037;QD=17.50;ReadPosRankSum=2.434;VQSLOD=1.1649;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:24.08:0,24,605	0/0:8,0:8:15.02:0,15,214	./.	./.	0/0:14,0:14:21.07:0,21,611	1/1:4,14:20:33.11:634,33,0	1/1:4,8:14:15.05:267,15,0	0/0:23,0:21:17.08:0,17,327	0/0:12,0:12:18.04:0,18,426	0/0:10,0:15:25.64:0,26,736	0/0:14,0:14:12.03:0,12,311	1/1:11,10:22:21.07:386,21,0	1/1:12,4:17:12.04:225,12,0	0/0:15,0:17:33.11:0,33,1007	0/0:21,0:22:39.09:0,39,912	0/0:15,0:15:15.05:0,15,412	0/0:25,0:25:38.34:0,38,542	0/0:14,0:14:15.05:0,15,403	0/0:16,0:16:21.46:0,21,524	0/0:15,0:15:21.07:0,21,664	0/0:15,0:14:27.09:0,27,746	1/1:6,0:6:3.01:31,3,0	1/1:1,7:8:12.04:245,12,0	1/1:8,4:12:6.02:122,6,0	0/0:13,0:12:18.06:0,18,545	0/0:12,0:12:17.09:0,17,363	0/0:30,0:31:60.18:0,60,1503	0/0:7,0:8:6.02:0,6,136
chr10	59164477	.	CG	C	912.13	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=9.241;DP=475;FS=10.536;HRun=1;HaplotypeScore=78.5733;InbreedingCoeff=0.8151;MQ=67.40;MQ0=4;MQRankSum=2.180;QD=6.42;ReadPosRankSum=0.493;VQSLOD=-0.3800;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:23,1:24:13.89:54,14,0	1/1:1,1:2:5.68:40,6,0	0/0:14,0:10:27.06:0,27,346	0/0:25,0:13:29.55:0,30,365	0/1:20,0:20:16.74:95,0,17	0/0:27,0:27:59.89:0,60,673	0/0:21,0:21:50.99:0,51,650	1/1:37,0:37:90.03:470,90,0	1/1:10,0:9:6.64:21,7,0	0/0:13,0:13:39.13:0,39,614	0/0:15,0:15:36.12:0,36,567	0/0:21,0:21:42.87:0,43,519	0/0:13,0:13:35.90:0,36,434	0/0:22,0:22:50.95:0,51,734	0/0:16,0:16:42.12:0,42,620	1/1:14,0:14:7.40:37,7,0	1/1:11,10:21:39.46:336,39,0	1/1:14,0:14:10.38:43,10,0	0/0:16,0:16:39.07:0,39,548	0/0:17,0:17:45.15:0,45,716	0/0:21,0:21:54.18:0,54,859	0/0:2,0:2:2.87:0,3,38	0/0:10,0:10:20.88:0,21,227	0/0:15,0:15:26.53:0,27,367	0/0:16,0:16:45.15:0,45,717	0/0:18,0:18:51.16:0,51,777	0/0:23,0:23:63.67:0,64,954	0/0:8,0:8:24.07:0,24,360
chr10	59164478	.	G	GAC	2680.67	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=6.463;DP=473;FS=12.627;HRun=0;HaplotypeScore=80.5319;InbreedingCoeff=0.9247;MQ=67.64;MQ0=4;MQRankSum=1.772;QD=17.64;ReadPosRankSum=0.106;VQSLOD=2.5671;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,19:26:18.06:323,18,0	1/1:4,0:4:5.80:40,6,0	0/0:14,0:10:24.91:0,25,324	0/0:25,0:13:10.92:0,11,306	1/1:18,1:20:42.78:506,43,0	0/0:28,0:28:60.20:0,60,893	0/0:20,0:20:51.15:0,51,752	1/1:38,0:38:99:1100,111,0	1/1:3,1:11:12.04:182,12,0	0/0:13,0:13:39.07:0,39,540	0/0:15,0:15:36.12:0,36,568	0/0:18,0:18:43.39:0,43,647	0/0:14,0:14:36.10:0,36,510	0/0:21,0:21:48.14:0,48,716	0/0:15,0:15:42.13:0,42,652	1/1:2,12:15:9.93:186,10,0	1/1:21,0:21:57.32:379,57,0	1/1:0,0:16:12.04:162,12,0	0/0:13,0:13:36.11:0,36,537	0/0:17,0:17:45.15:0,45,734	0/0:20,0:20:54.17:0,54,855	0/0:2,0:2:2.98:0,3,24	0/0:8,0:8:21.01:0,21,280	0/0:15,0:15:26.87:0,27,414	0/0:17,0:17:45.15:0,45,734	0/0:17,0:17:51.15:0,51,780	0/0:21,0:21:63.19:0,63,962	0/0:8,0:8:24.08:0,24,386
chr10	59164609	.	TA	T	3104.04	PASS	AB=0.921;AC=18;AF=0.321;AN=56;BaseQRankSum=10.055;DP=500;FS=0.792;HRun=10;HaplotypeScore=47.7650;InbreedingCoeff=0.8284;MQ=72.72;MQ0=0;MQRankSum=-1.132;QD=15.52;ReadPosRankSum=-1.327;VQSLOD=3.2245;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,25:29:71.96:625,72,0	1/1:0,5:5:12:104,12,0	0/1:14,1:13:2.46:2,0,157	0/0:6,0:5:8.98:0,9,86	1/1:5,17:23:44.97:391,45,0	0/0:22,0:22:63.10:0,63,667	0/0:11,0:11:27.05:0,27,289	1/1:5,34:39:71.74:839,72,0	1/1:1,11:12:26.99:234,27,0	0/0:12,1:13:4.04:0,4,272	0/0:22,0:22:60.15:0,60,655	0/0:24,0:24:60.12:0,60,650	0/0:18,0:18:42.08:0,42,443	0/0:16,0:17:50.87:0,51,512	0/0:17,0:17:22.36:0,22,472	1/1:3,15:18:41.99:365,42,0	1/1:3,18:21:38.98:339,39,0	1/1:2,17:19:44.98:391,45,0	0/1:17,2:19:19.85:20,0,390	0/0:15,0:15:33.09:0,33,364	0/0:18,0:18:42.07:0,42,438	0/0:12,0:12:36.10:0,36,398	0/0:20,0:20:57.15:0,57,631	0/0:15,0:15:39.11:0,39,431	0/0:15,0:15:30.06:0,30,317	0/0:23,0:23:60.16:0,60,664	0/0:18,0:18:39.11:0,39,431	0/0:14,0:14:42.11:0,42,465
chr10	59165432	.	TTC	T	3834.87	PASS	AB=0.510;AC=21;AF=0.375;AN=56;BaseQRankSum=6.666;DP=434;FS=12.001;HRun=0;HaplotypeScore=78.0376;InbreedingCoeff=0.8344;MQ=64.60;MQ0=5;MQRankSum=-3.235;QD=23.53;ReadPosRankSum=0.313;VQSLOD=3.7527;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:0,22:22:0.47:0,0,1	1/1:4,1:5:5.81:50,6,0	0/0:20,0:16:27.86:0,28,613	0/0:30,0:11:29.22:0,29,346	0/1:1,24:25:0:0,0,0	1/1:12,0:12:30.10:461,30,0	0/0:0,6:6:0:0,0,0	1/1:0,34:33:96.31:1390,96,0	1/1:14,0:14:17.89:237,18,0	0/0:19,0:19:57.18:0,57,934	0/0:12,0:12:33.49:0,33,497	1/1:10,1:11:33.11:499,33,0	1/1:0,11:11:3.01:36,3,0	0/0:17,0:17:39.59:0,40,641	0/0:20,0:20:60.18:0,60,948	1/1:18,2:20:26:254,26,0	1/1:7,6:13:27.09:368,27,0	1/1:7,0:7:18.01:225,18,0	0/0:19,0:19:57.19:0,57,953	0/0:17,0:17:42.40:0,42,644	0/0:19,0:19:57.19:0,57,906	0/0:0,8:8:0.68:0,1,2	0/0:0,6:6:0.40:0,0,1	1/1:10,1:11:21.07:316,21,0	0/0:20,0:19:51.65:0,52,878	0/0:12,0:12:32.51:0,33,535	0/0:16,0:16:45.88:0,46,663	0/0:8,0:8:24.08:0,24,383
chr10	59165434	.	CGAGA	C	134.72	PASS	AB=0.976;AC=19;AF=0.452;AN=42;BaseQRankSum=-0.655;DP=447;FS=6.467;HRun=0;HaplotypeScore=106.8483;InbreedingCoeff=0.2944;MQ=61.10;MQ0=5;MQRankSum=0.824;QD=0.69;ReadPosRankSum=-0.655;VQSLOD=1.6366;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:25:0.47:1,0,0	0/0:5,0:5:3.01:0,3,46	./.	./.	0/1:28,0:28:0:0,0,0	0/0:14,0:14:0:0,0,0	./.	./.	0/0:14,0:14:3.01:0,3,36	./.	0/1:11,0:12:3.94:22,0,4	1/1:11,0:11:0.21:22,0,0	./.	1/1:13,5:18:3:46,3,0	0/1:21,1:22:33.91:34,0,61	0/0:20,0:20:15.05:0,15,231	0/0:14,0:14:5.93:0,6,39	0/0:8,0:8:5.98:0,6,66	1/1:20,0:20:2.84:14,3,0	1/1:16,0:16:2.97:21,3,0	0/0:20,0:20:0:0,0,0	0/1:8,0:8:0:0,0,0	0/1:7,0:7:0.01:0,0,0	1/1:10,0:10:2.60:12,3,0	0/0:20,0:19:5.59:0,6,34	0/0:11,0:11:3.63:0,4,9	1/1:15,1:17:5.29:73,5,0	./.
chr10	59165451	.	G	GACAGAGAC	1584.20	PASS	AB=1.000;AC=13;AF=0.241;AN=54;BaseQRankSum=8.945;DP=490;FS=19.213;HRun=0;HaplotypeScore=139.8583;InbreedingCoeff=0.7892;MQ=50.43;MQ0=8;MQRankSum=-6.642;QD=11.91;ReadPosRankSum=-0.272;VQSLOD=1.6301;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:25:0:0,0,0	1/1:1,5:7:5.97:146,6,0	0/0:14,0:9:4.43:0,4,151	0/0:30,0:11:17.61:0,18,165	./.	0/0:15,0:15:29.10:0,29,423	0/0:14,0:14:20.35:0,20,322	1/1:32,0:28:50.99:529,51,0	1/1:1,0:19:3.01:109,3,0	0/0:19,0:19:57.18:0,57,936	0/0:15,0:15:33.10:0,33,516	0/0:23,0:23:48.50:0,48,679	0/0:14,0:14:7.23:0,7,96	0/0:25,0:25:50.86:0,51,851	0/0:22,0:22:45.11:0,45,685	1/1:2,22:26:14.58:635,15,0	1/1:14,0:14:14.96:195,15,0	1/1:8,0:8:11.80:135,12,0	0/0:18,0:18:54.15:0,54,799	0/0:12,0:12:24.03:0,24,367	0/0:21,0:21:48.15:0,48,762	0/0:7,0:7:2.96:0,3,19	0/0:8,0:8:0.94:0,1,2	0/0:11,0:11:18.05:0,18,305	0/0:19,0:18:45.12:0,45,688	0/0:21,0:21:63.14:0,63,945	0/0:19,0:19:52.48:0,52,794	0/0:8,0:8:11.97:0,12,107
chr10	59166254	.	TCTC	T	7438.36	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=17.258;DP=770;FS=10.057;HRun=0;HaplotypeScore=142.9168;InbreedingCoeff=0.9998;MQ=87.64;MQ0=0;MQRankSum=-4.412;QD=40.21;ReadPosRankSum=3.363;VQSLOD=6.1286;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,163,3601	0/0:16,0:16:48.16:0,48,1060	0/0:30,0:30:84.23:0,84,1677	0/0:27,0:26:45.44:0,45,1416	0/0:26,0:26:78.27:0,78,1739	1/1:1,30:31:78.27:1299,78,0	1/1:2,25:27:66.23:1099,66,0	0/0:41,0:41:99:0,114,2535	0/0:20,0:20:54.15:0,54,1087	0/0:28,0:28:78.27:0,78,1737	0/0:28,0:28:78.23:0,78,1704	1/1:4,26:30:66.23:1099,66,0	1/1:0,23:23:60.21:999,60,0	0/0:27,0:27:81.28:0,81,1815	0/0:22,0:22:60.21:0,60,1353	0/0:32,0:32:96.33:0,96,2172	0/0:33,0:32:92.03:0,92,2077	0/0:22,0:22:66.23:0,66,1491	0/0:26,0:26:69.24:0,69,1537	0/0:23,0:23:66.22:0,66,1449	0/0:26,0:26:75.26:0,75,1694	1/1:3,26:29:78.27:1298,78,0	1/1:4,22:26:63.22:1048,63,0	1/1:4,15:19:34.45:596,34,0	0/0:26,0:26:78.27:0,78,1752	0/0:37,0:37:99:0,108,2380	0/0:32,0:32:93.32:0,93,2105	0/0:9,0:9:27.09:0,27,564
chr10	59168411	.	TTATC	T	2193.89	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.986;DP=689;FS=0.559;HRun=0;HaplotypeScore=112.7850;InbreedingCoeff=0.9970;MQ=77.73;MQ0=2;MQRankSum=-2.041;QD=37.18;ReadPosRankSum=-0.889;VQSLOD=3.6678;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,105,2412	1/1:0,11:11:21.07:360,21,0	0/0:32,0:31:66.33:0,66,1272	0/0:24,0:24:56.74:0,57,1235	0/0:26,0:26:72.23:0,72,1742	0/0:18,0:18:54.19:0,54,1355	0/0:22,0:22:60.19:0,60,1428	1/1:3,28:31:84.26:1358,84,0	0/0:23,0:23:57.20:0,57,1379	0/0:28,0:28:69.22:0,69,1594	0/0:17,0:17:39.13:0,39,870	0/0:28,0:28:75.24:0,75,1808	0/0:28,0:28:78.27:0,78,1924	0/0:22,0:22:57.20:0,57,1424	0/0:30,0:30:78.25:0,78,1854	0/0:35,0:35:93.31:0,93,2240	1/1:1,16:16:36.12:618,36,0	0/0:16,0:16:45.15:0,45,1125	0/0:21,0:21:48.14:0,48,999	0/0:25,0:25:63.20:0,63,1530	0/0:31,0:30:72.23:0,72,1728	0/0:24,0:24:66.21:0,66,1537	0/0:9,0:9:21.06:0,21,478	0/0:22,0:22:66.21:0,66,1580	0/0:21,0:21:57.20:0,57,1404	0/0:32,0:32:78.24:0,78,1860	0/0:33,0:32:78.27:0,78,1892	0/0:19,0:19:36.08:0,36,801
chr10	59170431	.	TAA	T	759.19	PASS	AB=0.906;AC=10;AF=0.179;AN=56;BaseQRankSum=1.856;DP=547;FS=15.595;HRun=16;HaplotypeScore=117.6033;InbreedingCoeff=0.5959;MQ=78.13;MQ0=8;MQRankSum=-2.885;QD=7.03;ReadPosRankSum=2.213;VQSLOD=-0.2784;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,11:19:1.56:229,2,0	0/0:6,0:6:2.51:0,3,8	0/0:37,0:23:39.01:0,39,253	0/0:43,0:25:16.93:0,17,119	1/1:11,6:18:32.27:238,32,0	0/0:16,0:15:12.53:0,13,202	0/0:13,0:13:5.29:0,5,135	0/0:14,0:14:1.38:0,1,4	0/1:10,3:13:21.68:113,0,22	0/0:18,0:19:44.04:0,44,454	0/0:16,0:16:20.36:0,20,204	0/0:10,0:10:22.85:0,23,163	0/0:25,0:25:43.38:0,43,345	0/0:15,1:18:6.65:0,7,335	0/0:23,0:24:50.70:0,51,544	1/1:6,8:16:20.54:197,21,0	0/0:17,1:17:6.56:0,7,31	1/1:11,7:16:15.61:129,16,0	0/0:13,0:14:29.08:0,29,266	0/0:19,0:22:50.47:0,50,566	0/0:10,0:11:22.16:0,22,195	0/0:21,0:21:38.29:0,38,258	0/0:18,0:17:19.39:0,19,174	0/1:19,0:19:7.27:7,0,116	0/0:22,0:24:35.01:0,35,368	0/0:30,0:32:70.45:0,70,696	0/0:21,0:25:56.68:0,57,616	0/0:8,0:9:23.39:0,23,247
chr10	59170440	.	A	AC	2677.30	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=1.544;DP=580;FS=3.700;HRun=0;HaplotypeScore=118.1654;InbreedingCoeff=0.9833;MQ=76.46;MQ0=10;MQRankSum=-1.540;QD=21.77;ReadPosRankSum=4.502;VQSLOD=5.0263;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:29:69.69:0,70,453	0/0:9,0:9:20.25:0,20,166	0/0:43,0:22:33.41:0,33,254	0/0:42,0:20:23.75:0,24,156	0/0:21,0:20:37.47:0,37,250	1/1:8,11:18:46.43:451,46,0	1/1:5,10:15:38.31:388,38,0	0/0:14,0:14:17.74:0,18,131	0/0:11,1:12:24.97:0,25,145	0/0:20,0:20:50.06:0,50,528	0/0:15,0:14:32.86:0,33,295	1/1:4,6:10:8.14:220,8,0	1/1:3,18:20:35.23:502,35,0	0/0:17,0:17:42.13:0,42,419	0/0:21,0:21:54.08:0,54,636	0/0:15,0:14:35:0,35,226	0/0:21,0:20:41.28:0,41,315	0/0:22,0:20:48.72:0,49,320	0/0:20,0:19:52.27:0,52,476	0/0:27,0:26:63.20:0,63,634	0/0:11,0:11:24.61:0,25,212	1/1:5,14:20:57.98:593,58,0	1/1:3,16:18:46.65:432,47,0	1/1:5,14:19:26.93:287,27,0	0/0:27,0:27:52.19:0,52,528	0/0:29,0:29:84.01:0,84,867	0/0:27,0:26:76.33:0,76,840	0/0:11,0:11:31.78:0,32,296
chr10	59170447	.	ACAAACAAAC	A	2526.82	PASS	AB=0.951;AC=11;AF=0.196;AN=56;BaseQRankSum=-5.735;DP=563;FS=4.595;HRun=0;HaplotypeScore=185.3745;InbreedingCoeff=0.4492;MQ=62.28;MQ0=11;MQRankSum=-1.989;QD=16.85;ReadPosRankSum=-9.867;VQSLOD=-0.2067;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:31:53.37:0,53,786	1/1:8,0:8:24.08:602,24,0	0/0:26,0:12:3.78:0,4,318	0/1:25,0:11:2.46:2,0,53	0/0:20,0:19:24.78:0,25,392	0/0:19,0:19:46.97:0,47,1138	0/0:19,0:19:42.96:0,43,858	1/1:0,15:15:36.64:569,37,0	0/1:11,0:12:41.45:41,0,204	0/0:22,0:22:41.59:0,42,1744	0/0:12,0:11:30.06:0,30,844	0/0:11,0:11:32.13:0,32,761	0/0:21,0:20:59.26:0,59,1680	0/0:16,0:16:45.13:0,45,1112	0/0:23,0:23:15.93:0,16,1515	0/1:17,0:17:55.14:55,0,383	1/1:27,0:26:64.93:1398,65,0	0/1:20,0:18:12.67:13,0,419	0/1:22,0:23:4.23:4,0,1351	0/0:26,0:25:66.18:0,66,2092	0/0:11,0:11:8.71:0,9,692	0/0:19,0:19:55.82:0,56,1378	0/0:20,0:19:39.14:0,39,1036	0/0:18,0:18:14.14:0,14,765	0/0:27,0:28:35.72:0,36,1533	0/0:29,0:29:84.29:0,84,2736	0/0:23,0:23:66.47:0,66,1854	0/0:12,0:12:35.33:0,35,1030
chr10	59170454	.	AAC	A	1639.31	PASS	AB=0.963;AC=22;AF=0.393;AN=56;BaseQRankSum=5.223;DP=580;FS=5.167;HRun=0;HaplotypeScore=119.7678;InbreedingCoeff=0.2057;MQ=57.10;MQ0=11;MQRankSum=-1.524;QD=5.17;ReadPosRankSum=-5.754;VQSLOD=0.5924;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:36,0:32:7.92:148,0,8	1/1:8,0:8:23.89:205,24,0	0/0:18,0:7:3.31:0,3,84	0/1:23,0:10:16.10:16,0,37	1/1:21,0:20:14.61:126,15,0	0/1:18,1:19:22:22,0,187	0/1:20,0:20:44.89:45,0,166	1/1:15,0:15:22.45:152,22,0	1/1:11,0:11:11.69:110,12,0	0/0:22,0:22:19.09:0,19,544	0/0:15,0:14:20.08:0,20,330	0/1:10,2:12:70.23:70,0,141	0/1:26,0:25:68.35:68,0,310	0/0:15,0:15:25.21:0,25,321	0/0:20,0:20:47:0,47,538	0/1:17,0:16:2.96:93,0,3	1/1:30,0:28:61.70:468,62,0	1/1:20,0:19:0.37:92,0,0	0/0:31,0:30:36.38:0,36,632	0/0:28,0:27:65.03:0,65,686	0/0:14,0:14:24.30:0,24,226	0/1:19,0:19:23.91:24,0,286	0/1:18,3:19:99:118,0,195	0/1:18,1:19:66.62:67,0,158	0/0:28,0:28:11:0,11,428	0/0:33,0:33:61.57:0,62,941	0/0:26,0:25:13.38:0,13,515	0/0:13,0:13:7.73:0,8,317
chr10	59170456	.	C	CAA	2758.76	PASS	AB=0.949;AC=31;AF=0.554;AN=56;BaseQRankSum=8.012;DP=583;FS=8.374;HRun=12;HaplotypeScore=122.3864;InbreedingCoeff=0.6612;MQ=56.21;MQ0=11;MQRankSum=-5.462;QD=7.95;ReadPosRankSum=-2.250;VQSLOD=0.7282;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:36,0:32:21:286,21,0	0/1:8,0:8:0:1,0,0	0/0:17,0:7:5.45:0,5,53	0/1:22,0:10:24.48:28,0,24	1/1:21,0:20:18.44:98,18,0	1/1:4,14:20:16.06:409,16,0	1/1:8,4:21:23.47:256,23,0	1/1:17,0:17:3.71:15,4,0	1/1:11,0:11:1.85:52,2,0	0/0:21,0:21:5.56:0,6,194	0/0:15,0:14:9.84:0,10,165	1/1:10,2:12:6.72:209,7,0	1/1:19,5:24:47.35:477,47,0	0/0:16,0:16:9.92:0,10,86	0/0:18,0:18:20.73:0,21,194	1/1:17,0:16:14.23:106,14,0	1/1:29,0:27:4.91:15,5,0	1/1:20,0:19:5.04:98,5,0	0/0:29,0:31:21.85:0,22,395	0/0:22,0:26:23.21:0,23,242	0/0:12,0:15:20.03:0,20,146	1/1:13,6:19:29.89:303,30,0	1/1:16,4:19:32.46:329,32,0	1/1:17,1:19:25.52:265,26,0	0/1:23,0:28:11.06:11,0,141	0/0:34,0:34:49.27:0,49,447	0/0:25,0:24:3.17:0,3,197	0/0:15,0:15:20.20:0,20,192
chr10	59171154	.	C	CAGA	769.94	PASS	AB=0.927;AC=11;AF=0.196;AN=56;BaseQRankSum=7.145;DP=428;FS=1.355;HRun=0;HaplotypeScore=122.9135;InbreedingCoeff=0.5335;MQ=75.06;MQ0=1;MQRankSum=-4.061;QD=7.26;ReadPosRankSum=-4.406;VQSLOD=1.6608;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:27.06:0,27,398	0/0:6,0:6:17.98:0,18,257	0/0:24,0:20:55.41:0,55,925	0/0:17,0:16:48.11:0,48,780	0/0:21,0:21:40.29:0,40,855	0/1:12,3:15:6.25:120,0,6	0/1:8,0:8:4.06:24,0,4	0/0:39,0:39:22.45:0,22,1801	0/0:9,0:9:24:0,24,371	0/0:13,0:13:39.12:0,39,715	0/0:24,0:24:65.70:0,66,947	0/1:13,1:14:4.84:91,0,5	0/1:17,3:20:22.78:203,0,23	0/0:11,0:11:29.98:0,30,416	0/0:11,0:11:32.94:0,33,458	0/0:19,0:19:27.22:0,27,683	0/0:14,0:14:24.20:0,24,667	0/0:12,0:12:30:0,30,431	0/0:19,0:19:52.71:0,53,996	0/1:12,0:12:3.06:3,0,478	0/0:10,0:10:22.62:0,23,323	1/1:11,1:12:8.67:140,9,0	1/1:15,2:17:13.59:223,14,0	1/1:2,6:8:13.69:123,14,0	0/0:10,0:10:29.94:0,30,410	0/0:21,0:21:63.17:0,63,1092	0/0:23,0:23:66.23:0,66,1189	0/0:8,0:8:24:0,24,377
chr10	59171155	.	T	TAGA	290.51	PASS	AB=0.879;AC=8;AF=0.143;AN=56;BaseQRankSum=8.075;DP=426;FS=6.277;HRun=0;HaplotypeScore=124.4471;InbreedingCoeff=-0.1693;MQ=73.07;MQ0=1;MQRankSum=-4.875;QD=2.72;ReadPosRankSum=-4.847;VQSLOD=-0.0377;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:24.60:0,25,297	0/0:6,0:6:12.04:0,12,211	0/0:23,0:19:26.18:0,26,875	0/0:16,0:15:45.12:0,45,751	0/0:21,0:21:39.94:0,40,791	0/1:12,3:15:61.20:61,0,170	0/1:8,0:8:1.21:1,0,114	0/0:39,0:39:8.48:0,8,1668	0/0:9,0:9:18.05:0,18,306	0/0:13,0:13:36.10:0,36,689	0/0:24,0:24:51.45:0,51,831	0/1:13,1:14:28.12:28,0,215	0/1:18,2:21:99:132,0,245	0/0:11,0:11:21.46:0,21,321	0/0:11,0:11:21.02:0,21,326	0/0:18,0:18:2.58:0,3,492	0/0:14,0:14:21.22:0,21,614	0/0:12,0:12:21.78:0,22,344	0/0:19,0:19:40.19:0,40,970	0/1:12,0:12:18.03:18,0,448	0/0:10,0:10:3.20:0,3,226	0/1:11,1:12:31.80:32,0,73	0/1:15,2:17:79.01:79,0,132	0/1:2,6:8:14.18:68,0,14	0/0:10,0:10:21.92:0,22,292	0/0:21,0:21:56.13:0,56,952	0/0:22,0:22:66.14:0,66,1146	0/0:8,0:8:19:0,19,338
chr10	59171156	.	T	TATAGATAG	14968.23	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=1.117;DP=565;FS=2.839;HRun=0;HaplotypeScore=227.9741;InbreedingCoeff=0.5350;MQ=64.62;MQ0=2;MQRankSum=-1.325;QD=28.40;ReadPosRankSum=2.221;VQSLOD=4.5721;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:10,4:14:9.03:292,9,0	1/1:9,0:10:9.03:309,9,0	0/0:22,0:18:3.01:0,3,74	0/0:16,0:15:3.01:0,3,67	1/1:20,6:26:21.07:845,21,0	1/1:18,0:21:23.74:772,24,0	1/1:12,0:12:12:212,12,0	1/1:47,0:47:57.17:1655,57,0	1/1:16,0:16:15.05:484,15,0	1/1:17,0:19:21.07:734,21,0	1/1:29,0:35:27.09:897,27,0	1/1:17,0:18:15.05:507,15,0	1/1:23,0:27:21.05:636,21,0	1/1:14,0:17:12.04:407,12,0	1/1:18,0:18:24.08:808,24,0	1/1:22,0:24:12.04:374,12,0	1/1:18,0:19:15.05:297,15,0	1/1:12,0:17:21.07:663,21,0	1/1:22,0:21:9.03:263,9,0	1/1:17,0:17:14.74:423,15,0	1/1:10,0:10:3.01:59,3,0	1/1:14,0:15:8.37:302,8,0	1/1:19,0:22:18.06:643,18,0	1/1:3,0:9:13.10:312,13,0	1/1:14,0:16:12.04:417,12,0	1/1:18,0:28:39.03:1028,39,0	1/1:34,0:34:36.12:1214,36,0	1/1:8,0:14:12.04:417,12,0
chr10	59172674	.	G	GT	17931.87	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-5.964;DP=747;FS=2.264;HRun=1;HaplotypeScore=78.5650;InbreedingCoeff=0.9994;MQ=79.52;MQ0=0;MQRankSum=-4.045;QD=42.39;ReadPosRankSum=2.516;VQSLOD=5.3298;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,35:36:93.32:1486,93,0	1/1:0,8:8:21.07:336,21,0	0/0:20,0:20:54.13:0,54,676	0/0:14,0:14:41.99:0,42,519	1/1:0,27:27:75.26:1196,75,0	1/1:1,22:23:63.21:1007,63,0	1/1:1,34:35:87.30:1390,87,0	1/1:0,32:32:96.29:1451,96,0	1/1:3,16:18:48.16:767,48,0	0/0:25,0:25:75.21:0,75,1014	0/0:27,0:27:72.22:0,72,974	1/1:0,29:29:75.26:1198,75,0	1/1:1,28:29:81.28:1291,81,0	0/0:19,0:19:57.12:0,57,734	0/0:28,0:28:84.28:0,84,1175	1/1:0,29:29:69.24:1103,69,0	1/1:0,39:39:99:1629,102,0	1/1:0,36:36:99:1581,99,0	0/0:23,0:23:69.22:0,69,943	0/0:37,0:37:99:0,111,1513	0/0:37,0:37:99:0,111,1476	1/1:0,24:24:66.23:1054,66,0	1/1:0,29:29:78.10:1244,78,0	1/1:0,28:28:75.26:1198,75,0	0/0:22,0:22:63.20:0,63,865	0/0:33,0:33:99:0,99,1357	0/0:25,0:25:72.23:0,72,985	0/0:14,0:14:42.14:0,42,587
chr10	59173285	.	T	TA	1467.83	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-2.622;DP=346;FS=2.136;HRun=8;HaplotypeScore=44.5640;InbreedingCoeff=0.9723;MQ=87.59;MQ0=0;MQRankSum=0.274;QD=22.58;ReadPosRankSum=1.195;VQSLOD=3.9111;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:45.01:0,45,408	0/0:8,0:8:24.01:0,24,220	0/0:22,0:21:28.35:0,28,260	0/0:10,0:10:23.70:0,24,183	0/0:22,0:22:56.93:0,57,505	1/1:2,8:10:24.07:277,24,0	1/1:4,4:8:9.03:104,9,0	0/0:12,0:12:33:0,33,294	0/0:11,0:11:29.86:0,30,244	0/0:9,0:9:24.01:0,24,219	0/0:9,0:9:26.94:0,27,237	1/1:0,5:4:12.04:138,12,0	1/1:4,7:11:21.02:227,21,0	0/0:11,0:11:30.02:0,30,274	0/0:21,0:21:51.02:0,51,466	0/0:11,0:11:27.01:0,27,247	0/0:12,0:12:35.89:0,36,305	0/0:19,0:19:47.99:0,48,432	0/0:7,0:7:14.99:0,15,135	0/0:17,0:17:42.02:0,42,384	0/0:13,0:13:36:0,36,324	1/1:1,5:6:17.99:188,18,0	1/1:1,16:17:48.14:553,48,0	1/1:1,7:8:15.04:173,15,0	0/0:8,0:8:21.01:0,21,192	0/0:16,0:16:39.02:0,39,357	0/0:16,0:16:41.88:0,42,358	0/0:10,0:10:30.02:0,30,274
chr10	59175963	.	A	AT	19250.76	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-6.983;DP=632;FS=14.733;HRun=0;HaplotypeScore=69.2420;InbreedingCoeff=0.9853;MQ=73.77;MQ0=4;MQRankSum=-3.753;QD=32.25;ReadPosRankSum=5.361;VQSLOD=3.3811;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,0:37:98.46:743,98,0	1/1:0,11:11:30.10:439,30,0	0/0:19,0:13:31.65:0,32,271	0/0:14,0:13:14.70:0,15,120	1/1:1,1:30:77.45:597,77,0	1/1:0,22:22:54.18:790,54,0	1/1:0,26:26:51.17:746,51,0	1/1:1,36:37:99:1426,108,0	1/1:2,0:22:38.80:299,39,0	1/1:0,26:26:78.24:1117,78,0	1/1:1,18:19:45.67:660,46,0	1/1:0,11:11:21.07:307,21,0	1/1:0,14:15:45.15:643,45,0	1/1:1,15:16:33.11:481,33,0	1/1:0,23:23:60.20:878,60,0	1/1:0,0:19:50.63:398,51,0	1/1:0,27:27:75.25:1097,75,0	1/1:0,0:29:80.57:619,81,0	1/1:1,20:21:59.84:827,60,0	1/1:1,19:20:57.12:807,57,0	1/1:0,12:12:24.08:350,24,0	1/1:0,23:23:60.03:824,60,0	1/1:0,24:24:53.94:759,54,0	1/1:1,24:25:57.19:833,57,0	1/1:0,26:26:66.22:966,66,0	1/1:0,36:36:99:1465,108,0	1/1:0,27:27:59.75:876,60,0	1/1:0,10:10:21.07:307,21,0
chr10	59176782	.	C	CTTG	6587.25	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=15.339;DP=775;FS=6.761;HRun=0;HaplotypeScore=177.0297;InbreedingCoeff=-0.3353;MQ=37.94;MQ0=2;MQRankSum=-6.582;QD=9.41;ReadPosRankSum=1.843;VQSLOD=4.0134;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,8:27:53.30:670,53,0	0/1:20,0:20:56.35:56,0,482	0/0:13,0:7:14.98:0,15,194	0/0:15,0:10:27.34:0,27,324	1/1:20,11:31:34.61:859,35,0	0/1:25,0:25:99:200,0,259	0/1:17,0:16:78.55:79,0,113	0/0:35,0:34:20.34:0,20,611	1/1:18,15:33:89.76:1192,90,0	0/1:43,0:43:24.02:24,0,695	0/1:37,0:37:4.99:5,0,746	0/1:37,0:37:77.22:291,0,77	0/1:30,0:30:99:206,0,141	0/1:41,0:40:99:134,0,835	0/1:27,0:27:75.12:75,0,451	1/1:26,12:38:92.64:1234,93,0	0/1:17,0:17:12.72:13,0,377	1/1:6,5:11:26.45:462,26,0	0/1:24,0:22:11.79:12,0,257	0/1:34,0:34:58.22:58,0,763	0/0:12,0:12:30.07:0,30,395	0/1:36,0:36:99:359,0,154	0/1:31,0:31:99:280,0,160	0/1:19,0:19:23.66:24,0,166	0/1:31,0:31:99:115,0,467	0/1:45,0:45:51.58:52,0,848	0/1:30,0:30:99:133,0,493	0/1:16,0:16:56.22:56,0,277
chr10	59176788	.	G	GTTGTTC	6797.16	PASS	AB=1.000;AC=24;AF=0.429;AN=56;BaseQRankSum=10.033;DP=829;FS=3.438;HRun=0;HaplotypeScore=357.7529;InbreedingCoeff=0.6763;MQ=42.01;MQ0=3;MQRankSum=-10.226;QD=16.74;ReadPosRankSum=6.639;VQSLOD=2.5648;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:28:10.96:74,0,11	0/0:21,0:21:21.48:0,21,569	0/0:19,0:10:17.89:0,18,221	0/0:19,0:13:22.11:0,22,353	0/1:33,0:33:38.71:130,0,39	1/1:20,7:27:43.57:849,44,0	1/1:15,2:16:20.35:365,20,0	0/1:41,0:40:16.96:17,0,528	1/1:34,0:34:39.13:208,39,0	0/0:46,0:46:40.95:0,41,878	0/0:41,0:41:54.73:0,55,1107	1/1:35,5:40:53.34:1011,53,0	1/1:27,4:31:54.68:1022,55,0	0/0:46,0:45:46.07:0,46,1091	0/0:28,0:28:17.51:0,18,491	1/1:39,0:39:7.09:150,7,0	0/0:17,0:17:7.28:0,7,321	1/1:11,0:11:19.73:99,20,0	0/0:25,0:22:10.61:0,11,287	0/0:35,0:35:7.08:0,7,768	0/0:13,0:13:36.04:0,36,581	1/1:24,12:36:61.44:1376,61,0	1/1:25,8:33:57.32:1060,57,0	1/1:19,1:20:26.07:429,26,0	0/0:32,0:32:16.92:0,17,418	0/0:47,0:47:41.02:0,41,943	0/0:34,0:34:22.47:0,22,609	0/1:16,0:16:8.83:9,0,51
chr10	59177969	.	T	TA	6362.64	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-11.257;DP=413;FS=3.548;HRun=8;HaplotypeScore=36.8977;InbreedingCoeff=0.9217;MQ=70.73;MQ0=0;MQRankSum=0.659;QD=27.19;ReadPosRankSum=1.996;VQSLOD=5.2229;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,30:36:81.24:933,81,0	1/1:1,5:6:15.04:173,15,0	0/0:11,0:10:3.35:0,3,122	0/0:12,0:11:0.95:0,1,81	1/1:4,14:18:36.04:399,36,0	1/1:0,22:22:60.18:692,60,0	1/1:0,10:10:30.09:346,30,0	1/1:9,18:27:54.15:613,54,0	1/1:6,6:12:18.05:208,18,0	0/0:24,0:24:72.03:0,72,657	0/0:10,0:10:27.01:0,27,247	1/1:2,14:16:39.12:450,39,0	1/1:0,9:9:24.07:277,24,0	0/0:15,0:15:39.01:0,39,352	0/0:15,0:15:33.01:0,33,302	1/1:1,18:19:51.13:576,51,0	1/1:1,21:22:57.17:658,57,0	1/1:1,16:17:39.12:450,39,0	0/0:11,0:11:24.01:0,24,220	0/0:13,0:13:35.99:0,36,320	0/0:7,0:7:20.99:0,21,186	1/1:0,2:2:6.02:69,6,0	1/1:0,5:5:12.04:138,12,0	1/1:0,13:13:33.10:381,33,0	0/0:16,0:16:41.98:0,42,370	0/0:11,0:11:33.02:0,33,302	0/0:22,0:22:54.01:0,54,494	0/0:12,0:12:36.02:0,36,329
chr10	59179003	.	CAA	C	2109.84	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.189;DP=709;FS=2.338;HRun=6;HaplotypeScore=81.3878;InbreedingCoeff=0.9969;MQ=85.50;MQ0=0;MQRankSum=-2.791;QD=32.97;ReadPosRankSum=-1.587;VQSLOD=3.3462;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:58:99:0,163,2815	1/1:1,13:14:36.12:480,36,0	0/0:23,0:23:54.16:0,54,866	0/0:29,0:29:78.20:0,78,1278	0/0:30,0:30:87.28:0,87,1488	0/0:26,0:26:75.26:0,75,1350	0/0:24,0:24:72.23:0,72,1233	1/1:1,28:29:84.19:1052,84,0	0/0:30,0:30:90.28:0,90,1530	0/0:26,0:26:78.25:0,78,1350	0/0:12,0:12:36.12:0,36,622	0/0:27,0:27:81.28:0,81,1448	0/0:23,0:23:63.20:0,63,1059	0/0:27,0:27:81.28:0,81,1453	0/0:31,0:31:93.30:0,93,1616	0/0:29,0:29:87.28:0,87,1538	1/1:0,21:21:54.18:720,54,0	0/0:25,0:25:63.18:0,63,1092	0/0:25,0:25:72.18:0,72,1179	0/0:28,0:28:81.28:0,81,1451	0/0:26,0:26:75.22:0,75,1259	0/0:29,0:29:84.29:0,84,1509	0/0:23,0:23:63.20:0,63,1079	0/0:26,0:25:72.23:0,72,1258	0/0:12,0:12:33.11:0,33,594	0/0:25,0:25:69.23:0,69,1186	0/0:25,0:25:69.23:0,69,1210	0/0:6,0:6:18.04:0,18,294
chr10	59179612	.	GC	G	796.36	PASS	AB=1.000;AC=34;AF=0.810;AN=42;BaseQRankSum=-1.047;DP=87;FS=0.000;HRun=2;HaplotypeScore=32.5763;InbreedingCoeff=0.2680;MQ=87.75;MQ0=1;MQRankSum=-1.400;QD=11.06;ReadPosRankSum=-1.307;VQSLOD=1.1039;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,0:2:2.97:20,3,0	./.	0/0:7,0:7:13.50:0,14,141	0/1:9,0:7:19.85:20,0,39	./.	1/1:4,0:4:8.45:43,8,0	1/1:8,2:10:15.69:143,16,0	0/0:2,0:3:2.47:0,2,9	0/0:1,0:1:0.47:0,0,1	1/1:0,2:2:6.01:64,6,0	1/1:1,1:2:3.01:39,3,0	1/1:3,0:3:5.19:27,5,0	1/1:3,0:3:5.77:40,6,0	1/1:1,2:3:5.93:56,6,0	./.	1/1:3,0:3:5.02:29,5,0	0/1:3,0:3:1.43:3,0,1	./.	1/1:1,1:2:0.10:34,0,0	./.	1/1:6,4:10:21.86:217,22,0	1/1:3,0:3:2.37:8,2,0	1/1:2,0:2:2.74:12,3,0	1/1:2,0:2:2.22:7,2,0	1/1:4,0:4:5.95:44,6,0	./.	1/1:2,2:5:11.93:101,12,0	./.
chr10	59180751	.	T	TG	2092.38	PASS	AB=0.613;AC=13;AF=0.232;AN=56;BaseQRankSum=1.577;DP=488;FS=0.476;HRun=9;HaplotypeScore=72.8367;InbreedingCoeff=0.8534;MQ=66.75;MQ0=1;MQRankSum=-3.381;QD=19.37;ReadPosRankSum=-1.493;VQSLOD=3.4323;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:47.99:0,48,416	0/0:1,0:3:2.03:0,2,6	0/0:24,0:21:28.22:0,28,300	0/0:8,0:9:6.50:0,6,73	0/0:29,0:28:62.91:0,63,539	0/1:7,12:19:7:378,0,7	1/1:5,15:21:27.91:511,28,0	0/0:10,0:33:43.23:0,43,127	0/0:10,0:10:25.81:0,26,214	0/0:19,0:19:44.98:0,45,391	0/0:21,0:21:62.94:0,63,540	1/1:5,8:13:27.02:277,27,0	1/1:4,12:16:39.04:400,39,0	0/0:15,0:15:38.97:0,39,334	0/0:12,0:12:29.99:0,30,260	0/0:21,0:21:47.98:0,48,417	0/0:4,0:23:38.69:0,39,114	0/0:17,0:18:52.03:0,52,429	0/0:18,0:18:7.75:0,8,235	0/0:17,0:17:50.95:0,51,434	0/0:11,0:12:31.98:0,32,256	1/1:3,11:13:30.08:332,30,0	1/1:9,4:13:15.03:157,15,0	1/1:5,7:12:21.04:224,21,0	0/0:13,0:13:32.99:0,33,286	0/0:28,0:28:68.97:0,69,599	0/0:19,0:19:50.98:0,51,441	0/0:16,0:17:47.03:0,47,397
chr10	59180775	.	C	CT	1192.31	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=3.856;DP=486;FS=0.000;HRun=11;HaplotypeScore=76.2761;InbreedingCoeff=0.8931;MQ=63.38;MQ0=2;MQRankSum=-2.092;QD=10.94;ReadPosRankSum=-1.260;VQSLOD=2.8922;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:31:64.64:0,65,485	0/0:0,0:5:10.19:0,10,29	0/0:17,0:13:14.74:0,15,102	0/1:6,0:7:0.84:1,0,50	0/0:28,0:27:50.71:0,51,395	1/1:6,10:16:12.82:306,13,0	1/1:9,12:22:23.07:246,23,0	0/0:18,0:31:26.91:0,27,76	0/0:13,0:13:10.46:0,10,189	0/0:21,0:21:41.76:0,42,322	0/0:21,1:23:19.36:0,19,324	1/1:6,5:11:12.02:122,12,0	1/1:11,5:17:6.62:206,7,0	0/0:15,0:15:32.83:0,33,255	0/0:13,0:13:17.78:0,18,139	0/0:18,0:18:44.82:0,45,348	0/0:7,0:28:28.56:0,29,98	0/0:21,0:21:41.76:0,42,325	0/0:15,0:15:38.84:0,39,302	0/0:19,0:19:35.78:0,36,277	0/0:11,0:12:22.17:0,22,165	1/1:11,4:15:25.07:209,25,0	1/1:6,5:12:15.45:137,15,0	1/1:3,5:8:15.03:153,15,0	0/0:18,0:19:31.86:0,32,238	0/0:20,0:20:35.80:0,36,278	0/0:14,0:15:28.88:0,29,215	0/0:12,0:12:29.85:0,30,232
chr10	59180981	.	TTCTC	T	1173.09	PASS	AB=0.851;AC=28;AF=0.538;AN=52;BaseQRankSum=1.819;DP=583;FS=17.694;HRun=0;HaplotypeScore=104.0464;InbreedingCoeff=0.2454;MQ=68.36;MQ0=14;MQRankSum=-1.065;QD=3.61;ReadPosRankSum=0.657;VQSLOD=0.8512;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:27:2.76:6,3,0	0/0:12,0:12:9.03:0,9,153	./.	0/0:53,0:24:0.47:0,0,1	1/1:16,0:19:2.96:25,3,0	0/1:14,1:16:3.51:55,0,4	0/0:23,0:23:5.24:0,5,35	0/0:21,0:19:2.99:0,3,23	1/1:10,0:16:14.96:129,15,0	0/1:17,3:20:29.15:149,0,29	1/1:12,2:15:8.05:98,8,0	0/1:7,2:10:6.44:41,0,6	0/0:10,0:11:2.74:0,3,12	0/0:8,0:12:5.49:0,5,24	1/1:13,1:13:3.01:46,3,0	1/1:10,4:14:12.04:185,12,0	0/0:37,0:37:33.80:0,34,675	1/1:19,0:19:2.67:27,3,0	0/0:16,0:14:3.01:0,3,70	./.	1/1:26,3:29:6.01:72,6,0	0/0:14,0:17:12.04:0,12,206	0/1:19,2:21:18.93:40,0,19	0/1:26,2:33:31.78:76,0,32	0/1:11,1:12:36.04:39,0,36	1/1:23,3:27:6.93:117,7,0	1/1:16,7:24:15.04:197,15,0	1/1:4,0:3:3:28,3,0
chr10	59181876	.	TG	T	2658.03	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.970;DP=624;FS=0.000;HRun=2;HaplotypeScore=64.8462;InbreedingCoeff=0.9985;MQ=83.45;MQ0=0;MQRankSum=-3.709;QD=33.23;ReadPosRankSum=0.549;VQSLOD=3.4745;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,132,1975	1/1:0,14:14:39.13:506,39,0	0/0:23,0:23:66.22:0,66,951	0/0:15,0:15:21.95:0,22,528	0/0:22,0:22:66.22:0,66,989	0/0:14,0:14:42.14:0,42,628	0/0:33,0:33:96.30:0,96,1435	1/1:1,31:32:93.30:1204,93,0	0/0:18,0:18:54.18:0,54,809	0/0:20,0:20:57.19:0,57,837	0/0:15,0:15:39.12:0,39,565	0/0:30,0:30:90.29:0,90,1329	0/0:30,0:30:90.30:0,90,1348	0/0:25,0:25:75.25:0,75,1123	0/0:14,0:14:42.14:0,42,630	0/0:17,0:17:51.17:0,51,764	1/1:1,33:34:84.27:1091,84,0	0/0:19,0:19:54.18:0,54,809	0/0:22,0:22:63.21:0,63,942	0/0:20,0:20:54.02:0,54,809	0/0:37,0:37:99:0,102,1450	0/0:17,0:17:48.16:0,48,718	0/0:12,0:12:36.10:0,36,518	0/0:27,0:27:81.27:0,81,1214	0/0:15,0:15:42.14:0,42,630	0/0:23,0:23:63.21:0,63,945	0/0:21,0:21:60.20:0,60,898	0/0:10,0:10:30.10:0,30,450
chr10	59182694	.	TG	T	6617.99	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=13.533;DP=822;FS=5.098;HRun=4;HaplotypeScore=79.8434;InbreedingCoeff=0.9999;MQ=86.34;MQ0=0;MQRankSum=-2.601;QD=30.22;ReadPosRankSum=2.444;VQSLOD=5.3602;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:58:99:0,153,2122	0/0:12,0:12:33.11:0,33,457	0/0:28,0:28:69.14:0,69,958	0/0:28,0:28:60.24:0,60,916	0/0:27,0:27:69.22:0,69,949	1/1:1,27:28:69.21:828,69,0	1/1:2,29:31:72.22:864,72,0	0/0:25,0:25:50.74:0,51,674	0/0:31,0:31:87.29:0,87,1210	0/0:30,0:30:87.29:0,87,1206	0/0:24,0:24:69.20:0,69,919	1/1:1,42:43:69.33:1254,69,0	1/1:0,27:27:72.22:863,72,0	0/0:35,0:35:99:0,105,1451	0/0:31,0:31:93.30:0,93,1285	0/0:30,0:30:84.26:0,84,1146	0/0:42,0:42:99:0,126,1743	0/0:18,0:18:54.14:0,54,724	0/0:30,0:30:75.24:0,75,1034	0/0:17,0:17:39.13:0,39,543	0/0:51,0:51:99:0,144,1980	1/1:2,23:25:63.19:755,63,0	1/1:2,14:16:37:434,37,0	1/1:2,47:49:99:1620,135,0	0/0:21,0:21:60.19:0,60,823	0/0:31,0:31:81.25:0,81,1097	0/0:20,0:20:57.19:0,57,797	0/0:14,0:14:42.11:0,42,554
chr10	59183265	.	CGTGTGTGTGTGT	C	3168.52	PASS	AB=0.941;AC=21;AF=0.404;AN=52;BaseQRankSum=5.759;DP=618;FS=32.562;HRun=0;HaplotypeScore=207.4648;InbreedingCoeff=0.5918;MQ=65.62;MQ0=16;MQRankSum=-5.125;QD=11.56;ReadPosRankSum=0.753;VQSLOD=1.1413;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:37:45.60:0,46,1809	0/1:6,0:7:34.70:35,0,132	./.	./.	0/0:21,0:21:24.08:0,24,1189	0/0:19,0:20:21:0,21,536	0/0:21,0:21:21.06:0,21,503	0/0:28,0:25:16.52:0,17,243	0/0:18,0:18:15.03:0,15,607	1/1:20,7:28:17.79:272,18,0	1/1:16,1:17:5.39:241,5,0	0/0:18,0:20:33.04:0,33,648	0/0:12,0:19:36.10:0,36,731	0/1:13,0:13:0.11:32,0,0	1/1:29,2:37:10.09:551,10,0	0/0:17,0:17:27.07:0,27,1219	0/1:26,0:29:7.08:7,0,764	0/0:24,0:24:38.05:0,38,1382	0/1:23,2:24:17.98:140,0,18	1/1:11,4:15:6.02:205,6,0	0/1:24,0:23:9.27:43,0,9	0/0:11,0:12:21.06:0,21,486	0/0:11,0:17:18.03:0,18,395	0/0:26,0:30:18.06:0,18,428	1/1:18,5:27:33.99:928,34,0	1/1:13,9:22:11.96:222,12,0	1/1:8,5:14:12.04:392,12,0	1/1:11,3:14:9.03:289,9,0
chr10	59183745	.	ATGTGTG	A	1125.36	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=7.671;DP=763;FS=11.661;HRun=0;HaplotypeScore=162.4750;InbreedingCoeff=0.7752;MQ=66.49;MQ0=21;MQRankSum=-4.468;QD=3.76;ReadPosRankSum=-0.394;VQSLOD=1.7204;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:35:31.29:0,31,421	1/1:6,0:14:15.03:192,15,0	1/1:59,0:32:1.82:5,2,0	0/0:47,0:25:0.47:0,0,1	0/0:13,0:18:15.05:0,15,222	1/1:17,9:26:6.01:108,6,0	1/1:19,0:19:6.90:119,7,0	1/1:26,0:31:9.34:52,9,0	0/0:21,1:24:11.19:0,11,163	0/0:32,0:32:37.91:0,38,688	0/0:17,0:19:6.02:0,6,127	1/1:16,4:20:12.04:224,12,0	1/1:19,4:24:15.05:262,15,0	0/0:27,0:29:36.56:0,37,768	0/0:37,0:39:39.12:0,39,924	0/0:15,0:26:20.16:0,20,382	1/1:15,0:20:9.03:126,9,0	0/0:22,0:22:21.01:0,21,350	0/0:20,0:20:12.04:0,12,260	0/0:16,0:16:24.07:0,24,559	0/0:55,0:58:36.11:0,36,815	1/1:21,6:27:5.62:102,6,0	1/1:13,10:24:5.70:121,6,0	1/1:22,8:31:0.33:1,0,0	0/0:14,0:18:24:0,24,238	0/0:19,0:19:9.03:0,9,151	0/0:33,0:32:33.04:0,33,624	0/0:5,0:4:3.01:0,3,90
chr10	59184849	.	TAGAGGGCGGAGGG	T	1891.74	PASS	AC=6;AF=0.111;AN=54;BaseQRankSum=7.964;DP=267;FS=59.993;HRun=0;HaplotypeScore=99.3299;InbreedingCoeff=0.7739;MQ=74.43;MQ0=1;MQRankSum=0.827;QD=36.38;ReadPosRankSum=-1.308;VQSLOD=0.4916;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:39.13:0,39,1519	1/1:0,4:4:6.02:242,6,0	0/0:2,0:2:5.95:0,6,64	0/0:12,0:13:3.04:0,3,759	0/0:7,0:7:16.30:0,16,677	0/0:6,0:6:15.04:0,15,366	0/0:22,0:22:66.23:0,66,2599	1/1:3,22:25:60.64:1238,61,0	0/0:7,0:7:21.06:0,21,567	0/0:8,0:8:21.07:0,21,628	./.	0/0:11,0:11:30.10:0,30,1151	0/0:11,0:11:33.11:0,33,927	0/0:16,0:16:45.13:0,45,1874	0/0:12,0:12:33.10:0,33,1093	0/0:11,0:11:30.10:0,30,1377	1/1:5,18:22:15.05:542,15,0	0/0:2,0:2:5.98:0,6,66	0/0:7,0:7:15.05:0,15,651	0/0:5,0:5:15.05:0,15,629	0/0:18,0:18:54.18:0,54,2596	0/0:7,0:7:18.06:0,18,848	0/0:5,0:5:15.05:0,15,805	0/0:6,0:6:18.06:0,18,719	0/0:5,0:5:12.04:0,12,466	0/0:12,0:12:33.10:0,33,1109	0/0:5,0:5:15.05:0,15,668	0/0:3,0:3:9.03:0,9,159
chr10	59186307	.	CT	C	6865.70	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=14.266;DP=605;FS=5.338;HRun=6;HaplotypeScore=64.9181;InbreedingCoeff=0.9971;MQ=77.16;MQ0=0;MQRankSum=-0.726;QD=29.22;ReadPosRankSum=1.660;VQSLOD=5.7008;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,132,1705	1/1:1,5:6:15.04:161,15,0	0/0:14,0:14:23.88:0,24,272	0/0:12,0:12:27.23:0,27,326	0/0:21,0:21:60.20:0,60,789	1/1:0,14:14:42.11:451,42,0	1/1:1,20:21:60.15:645,60,0	1/1:2,29:31:84.21:903,84,0	0/0:22,0:22:66.19:0,66,834	0/0:20,0:20:54.16:0,54,686	0/0:15,0:15:42.12:0,42,537	1/1:2,27:29:72.18:774,72,0	1/1:1,24:25:69.17:742,69,0	0/0:22,0:22:60.18:0,60,775	0/0:15,0:15:42.14:0,42,552	0/0:17,0:17:42.13:0,42,539	1/1:3,47:50:99:1483,138,0	0/0:19,0:19:51.17:0,51,671	0/0:24,0:24:69.18:0,69,854	0/0:17,0:17:51.17:0,51,671	0/0:28,0:28:81.25:0,81,1050	1/1:0,21:21:57.14:613,57,0	1/1:0,14:14:36.09:385,36,0	1/1:2,22:24:66.16:709,66,0	0/0:23,0:23:57.19:0,57,750	0/0:26,0:26:75.22:0,75,947	0/0:21,0:21:63.20:0,63,814	0/0:10,0:10:30.10:0,30,395
chr10	59187102	.	TGGGCAGGTGAGCAGGC	T	1415.60	PASS	AB=1.000;AC=17;AF=0.340;AN=50;BaseQRankSum=5.625;DP=370;FS=1.534;HRun=0;HaplotypeScore=141.5116;InbreedingCoeff=0.7113;MQ=50.07;MQ0=18;MQRankSum=-4.785;QD=10.41;ReadPosRankSum=-3.559;VQSLOD=1.4229;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:16:39.13:0,39,1178	0/0:6,0:4:1.45:0,1,37	0/0:17,0:3:6.01:0,6,64	0/0:14,0:3:5.87:0,6,60	0/0:6,0:6:12.04:0,12,208	0/0:7,0:6:18.06:0,18,735	0/0:29,0:28:69.23:0,69,2354	0/0:8,0:4:6.48:0,6,73	0/0:12,0:12:36.07:0,36,998	1/1:3,7:9:12.97:207,13,0	./.	0/0:16,0:13:32.66:0,33,1122	0/0:13,0:12:27.09:0,27,534	1/1:4,0:4:6.02:147,6,0	1/1:5,0:5:6.01:118,6,0	0/0:9,0:9:5.09:0,5,722	0/1:18,0:17:6.71:7,0,285	0/0:21,0:19:54.19:0,54,2164	1/1:4,7:6:18.03:265,18,0	./.	1/1:22,40:56:5.45:56,5,0	0/0:7,0:6:18.06:0,18,618	0/0:10,0:10:24.08:0,24,679	0/0:36,0:34:93.32:0,93,3375	1/1:5,0:5:6.02:161,6,0	1/1:1,10:11:26.99:372,27,0	1/1:0,10:10:6.15:256,6,0	./.
chr10	59187110	.	TGAGCAGGC	T	1113.19	PASS	AB=1.000;AC=22;AF=0.423;AN=52;BaseQRankSum=6.996;DP=343;FS=0.611;HRun=0;HaplotypeScore=98.8232;InbreedingCoeff=0.5970;MQ=54.99;MQ0=11;MQRankSum=-5.051;QD=8.01;ReadPosRankSum=-3.443;VQSLOD=0.8455;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:41.87:0,42,1026	0/1:6,0:4:11.98:18,0,12	0/0:13,0:5:14.76:0,15,158	0/0:14,0:6:2.27:0,2,112	0/0:5,0:5:10.27:0,10,148	0/0:9,0:8:21.46:0,21,643	0/0:28,0:28:76.87:0,77,1947	0/1:6,0:4:13.73:14,0,42	0/0:13,0:13:36.10:0,36,896	1/1:8,0:7:13.03:135,13,0	./.	0/0:16,0:14:41.77:0,42,954	0/0:11,0:11:29.67:0,30,392	1/1:4,0:4:10.81:113,11,0	1/1:3,0:3:6.01:63,6,0	0/1:11,0:11:0.59:1,0,668	0/1:18,0:17:72.45:72,0,156	0/0:21,0:20:60.18:0,60,2035	1/1:7,0:6:17.93:187,18,0	./.	1/1:49,0:43:5.75:57,6,0	0/0:8,0:7:21.07:0,21,420	0/0:9,0:9:24.08:0,24,526	0/0:36,0:36:99:0,105,3014	1/1:5,0:5:15.01:196,15,0	1/1:10,0:10:26.98:291,27,0	1/1:10,0:9:6.24:104,6,0	1/1:2,0:1:3.01:47,3,0
chr10	59187130	.	CAGATGAGA	C	546.91	PASS	AB=0.792;AC=6;AF=0.107;AN=56;BaseQRankSum=3.974;DP=402;FS=3.209;HRun=0;HaplotypeScore=127.1325;InbreedingCoeff=0.4665;MQ=65.47;MQ0=7;MQRankSum=-4.278;QD=13.02;ReadPosRankSum=-1.319;VQSLOD=2.4995;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:47.59:0,48,973	1/1:3,2:4:9.03:178,9,0	0/0:13,0:13:36.32:0,36,766	0/0:17,0:13:33.10:0,33,893	0/0:6,0:6:13.92:0,14,445	0/0:13,0:12:33:0,33,523	0/0:29,0:29:80.95:0,81,1411	1/1:1,4:4:12.02:189,12,0	0/0:14,0:14:38.57:0,39,903	0/0:11,0:10:24.53:0,25,650	0/0:7,0:7:9.03:0,9,272	0/0:21,0:19:52.34:0,52,1042	0/0:15,0:15:23.06:0,23,799	0/0:8,0:8:17.99:0,18,497	0/0:5,0:5:15.05:0,15,366	0/0:17,0:17:51.03:0,51,1041	0/1:6,15:20:99:252,0,197	0/0:21,0:21:50.78:0,51,1082	0/0:14,0:12:35.45:0,35,564	0/0:1,0:1:3.01:0,3,69	0/0:47,0:43:20.41:0,20,433	0/0:8,0:8:19.86:0,20,306	0/0:9,0:9:27.03:0,27,528	0/0:40,0:40:99:0,104,1984	0/0:11,0:11:5.33:0,5,541	0/0:14,0:14:11.87:0,12,632	0/1:11,0:10:53.86:54,0,66	0/0:2,0:2:6.02:0,6,103
chr10	59188706	.	GGTCCTGGGTT	G	3093.28	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.628;DP=512;FS=15.869;HRun=0;HaplotypeScore=152.2980;InbreedingCoeff=0.9945;MQ=79.85;MQ0=0;MQRankSum=-8.511;QD=65.81;ReadPosRankSum=-1.123;VQSLOD=2.1352;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,108,5358	1/1:0,7:7:20.94:535,21,0	0/0:23,0:23:69.24:0,69,3083	0/0:23,0:23:66.18:0,66,2828	0/0:14,0:14:39.13:0,39,2064	0/0:26,0:26:78.27:0,78,4079	0/0:16,0:16:48.15:0,48,2374	1/1:3,22:25:63.05:1585,63,0	0/0:22,0:22:66.23:0,66,3371	0/0:22,0:22:63.22:0,63,3127	0/0:9,0:9:27.09:0,27,1399	0/0:17,0:17:51.18:0,51,2720	0/0:19,0:19:57.20:0,57,2954	0/0:21,0:21:60.21:0,60,3098	0/0:27,0:27:75.26:0,75,3763	0/0:26,0:26:78.26:0,78,3856	1/1:1,14:15:36.04:1115,36,0	0/0:18,0:18:54.19:0,54,2843	0/0:7,0:7:18.06:0,18,804	0/0:12,0:12:36.12:0,36,1773	0/0:22,0:22:60.21:0,60,3054	0/0:12,0:12:33.11:0,33,1738	0/0:10,0:10:30.10:0,30,1558	0/0:22,0:22:66.23:0,66,3391	0/0:13,0:13:36.12:0,36,1767	0/0:14,0:14:42.14:0,42,2026	0/0:22,0:22:63.22:0,63,3185	0/0:10,0:10:27.09:0,27,1260
chr10	59191748	.	GA	G	1588.20	PASS	AB=0.832;AC=21;AF=0.375;AN=56;BaseQRankSum=-6.057;DP=543;FS=7.696;HRun=14;HaplotypeScore=91.2370;InbreedingCoeff=0.7238;MQ=56.26;MQ0=17;MQRankSum=2.037;QD=8.63;ReadPosRankSum=-0.120;VQSLOD=2.5353;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:27.51:0,28,214	0/0:11,0:11:14.74:0,15,98	0/0:49,0:10:14.55:0,15,104	0/0:62,0:13:14.69:0,15,84	0/0:23,0:24:44.76:0,45,418	0/0:15,0:20:46.93:0,47,253	0/0:13,0:15:7.56:0,8,40	0/0:23,0:22:33.08:0,33,205	0/1:19,0:19:0.43:0,0,250	1/1:15,7:22:27.52:279,28,0	1/1:6,4:10:13.59:85,14,0	0/0:16,0:17:23.35:0,23,117	0/0:17,0:18:12.47:0,12,73	1/1:9,4:13:21.62:126,22,0	0/1:16,5:20:9.31:157,0,9	0/0:18,0:18:38.55:0,39,300	0/0:22,0:21:23.12:0,23,246	0/0:23,0:23:35.73:0,36,305	0/1:11,9:19:4.83:221,0,5	1/1:8,9:17:37.92:238,38,0	1/1:3,1:4:4.15:23,4,0	0/0:10,0:10:8.94:0,9,45	0/0:11,0:13:17.91:0,18,101	0/0:9,0:11:7.12:0,7,34	1/1:6,5:9:16.98:96,17,0	1/1:8,7:15:26.25:171,26,0	1/1:12,5:18:41.51:256,42,0	1/1:7,7:14:0.47:132,0,0
chr10	59191763	.	G	GAAAA	4148.64	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=-5.403;DP=568;FS=2.583;HRun=14;HaplotypeScore=125.2659;InbreedingCoeff=0.7083;MQ=57.21;MQ0=20;MQRankSum=-3.997;QD=26.09;ReadPosRankSum=0.558;VQSLOD=2.4826;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:22.74:0,23,572	0/1:6,0:6:64.67:65,0,102	0/0:59,0:16:24.88:0,25,311	0/0:76,0:17:23.99:0,24,233	0/0:27,0:27:76.39:0,76,973	1/1:21,5:25:68.91:1017,69,0	1/1:11,2:13:35.89:552,36,0	0/1:31,0:29:99:223,0,323	0/0:17,0:17:39.07:0,39,551	0/0:23,0:23:50.72:0,51,738	0/0:9,0:9:21.05:0,21,292	1/1:16,1:17:49.83:662,50,0	1/1:4,10:14:11.07:215,11,0	0/0:10,0:10:5.02:0,5,304	0/0:20,0:19:21.38:0,21,520	0/0:17,0:17:45.11:0,45,690	0/1:23,0:22:99:253,0,212	0/0:21,0:21:30.68:0,31,576	0/0:22,0:20:52.76:0,53,662	0/0:20,0:20:50.94:0,51,637	0/0:7,0:7:8.81:0,9,93	1/1:7,0:7:16.75:164,17,0	1/1:10,2:11:33.06:608,33,0	1/1:9,1:10:23.10:390,23,0	0/0:14,0:12:26.68:0,27,342	0/0:16,0:16:47.13:0,47,617	0/0:18,0:18:37.17:0,37,549	0/0:12,0:12:32.90:0,33,441
chr10	59191779	.	G	GA	5022.32	PASS	AB=0.832;AC=36;AF=0.643;AN=56;BaseQRankSum=-6.011;DP=529;FS=6.130;HRun=10;HaplotypeScore=86.9363;InbreedingCoeff=0.6592;MQ=62.52;MQ0=14;MQRankSum=-1.518;QD=13.72;ReadPosRankSum=1.276;VQSLOD=4.9761;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,21:22:39.10:416,39,0	1/1:3,0:7:5.68:28,6,0	0/0:48,0:18:23.36:0,23,234	0/1:61,0:17:15.78:16,0,109	1/1:8,13:22:22.49:398,22,0	0/0:26,0:25:61.83:0,62,484	0/0:13,0:14:31.90:0,32,241	1/1:28,0:31:23.14:138,23,0	1/1:1,10:11:24.06:256,24,0	1/1:5,15:20:52:533,52,0	1/1:2,7:9:21.05:223,21,0	0/0:19,0:19:44.53:0,45,342	0/0:16,1:17:2.02:0,2,104	1/1:2,9:11:27.06:281,27,0	1/1:2,12:14:36.01:362,36,0	0/0:17,0:17:41.94:0,42,345	1/1:11,0:18:19.95:102,20,0	1/1:4,13:17:30.08:320,30,0	0/1:12,12:24:23.18:346,0,23	1/1:6,12:18:11.98:306,12,0	1/1:1,5:6:8.98:84,9,0	0/0:8,0:8:8.96:0,9,74	0/0:13,0:13:25.95:0,26,203	0/1:8,0:8:3.77:4,0,62	1/1:4,14:16:38.89:385,39,0	1/1:6,13:19:39.06:403,39,0	0/1:7,6:13:1.06:167,0,1	1/1:2,8:10:5.42:255,5,0
chr10	59192021	.	CTCTCTCTCTTTTTTTT	C	5501.78	PASS	AB=0.955;AC=16;AF=0.286;AN=56;BaseQRankSum=7.554;DP=424;FS=0.649;HRun=0;HaplotypeScore=117.4501;InbreedingCoeff=0.7263;MQ=58.42;MQ0=19;MQRankSum=-6.793;QD=45.47;ReadPosRankSum=2.303;VQSLOD=4.3327;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:12.04:0,12,615	0/1:4,0:3:51.01:51,0,84	0/0:52,0:12:13.28:0,13,695	0/0:50,0:14:30.99:0,31,787	0/0:8,0:8:9.03:0,9,567	1/1:2,15:15:27.09:1129,27,0	1/1:1,20:23:39.13:1712,39,0	0/1:9,0:6:12.38:99,0,12	0/0:4,0:4:3.01:0,3,205	0/0:12,0:10:30.10:0,30,1475	0/0:12,0:12:36.09:0,36,1164	1/1:1,12:15:21.07:840,21,0	1/1:0,5:5:6.02:278,6,0	0/0:18,0:18:37.66:0,38,1928	0/0:15,0:15:42.12:0,42,2090	0/0:6,0:5:9.03:0,9,280	0/0:7,0:28:8.68:0,9,135	0/0:13,0:12:15.05:0,15,663	0/0:11,0:11:33.11:0,33,1300	0/0:10,0:9:27.09:0,27,1496	0/0:10,0:10:27.08:0,27,1287	1/1:1,9:12:21.03:726,21,0	1/1:1,15:16:9.03:345,9,0	1/1:2,17:19:12.51:322,13,0	0/0:11,0:10:30.10:0,30,1403	0/0:18,0:18:54.17:0,54,2742	0/0:6,0:6:18.06:0,18,740	0/0:6,0:5:15.05:0,15,429
chr10	59192022	.	TCTCTCTC	T	3708.69	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=8.131;DP=417;FS=0.661;HRun=0;HaplotypeScore=77.5386;InbreedingCoeff=0.8740;MQ=58.53;MQ0=20;MQRankSum=-6.856;QD=25.75;ReadPosRankSum=0.394;VQSLOD=3.2393;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:12.04:0,12,346	1/1:0,4:3:6.02:137,6,0	0/0:54,0:12:12.28:0,12,394	0/0:49,0:13:29.86:0,30,616	0/0:8,0:8:9.03:0,9,288	1/1:16,1:15:27.09:647,27,0	1/1:23,0:23:37.37:846,37,0	1/1:1,8:6:15.04:273,15,0	0/0:4,0:4:3.01:0,3,98	0/0:12,0:10:29.59:0,30,767	0/0:13,0:13:26.02:0,26,853	1/1:14,1:15:21.07:474,21,0	1/1:5,0:5:6.02:140,6,0	0/0:15,0:15:35.95:0,36,1107	0/0:15,0:14:30.84:0,31,1085	0/0:6,0:5:9.03:0,9,222	1/1:24,3:26:18.06:412,18,0	0/0:13,0:12:6.33:0,6,322	0/0:11,0:11:29.38:0,29,885	0/0:11,0:9:27.09:0,27,884	0/0:10,0:10:27.08:0,27,774	1/1:11,0:11:21.03:448,21,0	1/1:15,0:15:6.91:143,7,0	1/1:17,1:18:10.75:188,11,0	0/0:11,0:10:30.10:0,30,898	0/0:18,0:18:54.17:0,54,1606	0/0:6,0:6:18.06:0,18,462	0/0:6,0:5:15.05:0,15,392
chr10	59192030	.	T	TCTCTC	676.92	PASS	AB=0.808;AC=10;AF=0.179;AN=56;BaseQRankSum=-1.562;DP=473;FS=4.202;HRun=0;HaplotypeScore=113.2371;InbreedingCoeff=0.3408;MQ=58.60;MQ0=21;MQRankSum=-2.270;QD=6.91;ReadPosRankSum=0.870;VQSLOD=1.8525;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:5,6:13:4.31:210,4,0	0/0:6,0:5:0.86:0,1,40	0/0:53,0:11:14.08:0,14,179	0/0:52,0:16:7.86:0,8,243	0/1:5,6:12:33.23:202,0,33	0/0:17,0:15:27.06:0,27,321	0/0:23,0:23:36:0,36,402	0/1:11,0:8:1.19:1,0,88	1/1:1,4:5:3.01:84,3,0	0/0:15,0:13:12.68:0,13,360	0/0:17,0:17:33.17:0,33,521	0/0:17,0:16:20.43:0,20,226	0/0:5,0:5:5.98:0,6,55	0/0:19,0:19:33.99:0,34,647	0/0:14,0:13:28.04:0,28,552	1/1:5,0:4:7.25:153,7,0	0/1:40,0:38:1.50:1,0,189	0/1:4,7:10:23.10:154,0,23	0/0:10,0:9:21.53:0,22,374	0/0:11,0:9:26.45:0,26,498	0/0:11,0:11:24.01:0,24,413	0/0:11,0:11:18.05:0,18,217	0/0:16,0:16:8.40:0,8,84	0/0:18,0:18:3.47:0,3,38	0/0:14,0:13:27:0,27,486	0/0:20,0:20:45.51:0,46,834	0/0:11,0:10:17.94:0,18,255	0/0:15,0:14:12.64:0,13,165
chr10	59194441	.	AC	A	3537.55	PASS	AB=0.994;AC=34;AF=0.607;AN=56;BaseQRankSum=-1.710;DP=683;FS=171.204;HRun=1;HaplotypeScore=81.6947;InbreedingCoeff=0.0442;MQ=54.62;MQ0=24;MQRankSum=1.361;QD=6.49;ReadPosRankSum=-6.420;VQSLOD=-0.0314;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:24:10.63:11,0,229	1/1:10,0:9:23.94:196,24,0	1/1:33,1:7:0.38:21,0,0	0/0:25,0:10:7:0,7,47	0/0:39,1:40:43.67:0,44,498	1/1:22,0:21:56.87:474,57,0	1/1:21,0:21:50.39:364,50,0	1/1:30,0:28:64.92:480,65,0	0/0:26,0:25:40.56:0,41,290	0/1:48,0:46:99:106,0,452	0/1:20,1:21:34.13:34,0,200	1/1:0,20:20:2.90:16,3,0	1/1:12,0:11:26.85:210,27,0	0/1:26,0:26:40.67:41,0,204	0/1:17,0:16:42.60:43,0,87	0/0:27,0:25:47.92:0,48,352	1/1:26,0:26:71.85:591,72,0	0/0:20,0:20:35.56:0,36,241	0/1:22,0:19:69.29:69,0,157	0/1:29,0:25:99:127,0,137	0/1:22,0:22:20.31:20,0,246	1/1:1,21:22:32.58:214,33,0	1/1:0,14:14:4.77:24,5,0	1/1:21,0:18:38.97:333,39,0	0/1:41,0:37:45.19:45,0,400	0/1:30,1:30:63.17:63,0,300	0/1:21,0:21:47.33:47,0,148	0/1:10,0:9:7.30:7,0,114
chr10	59194968	.	GA	G	7944.72	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=15.547;DP=688;FS=2.093;HRun=3;HaplotypeScore=67.7740;InbreedingCoeff=0.9999;MQ=83.69;MQ0=0;MQRankSum=-2.026;QD=32.83;ReadPosRankSum=1.306;VQSLOD=5.3806;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,111,1555	1/1:0,13:13:36.11:446,36,0	0/0:20,0:20:57.19:0,57,798	0/0:25,0:25:60.19:0,60,806	0/0:30,0:30:90.24:0,90,1201	1/1:0,25:25:75.24:929,75,0	1/1:0,14:14:39.12:482,39,0	1/1:3,31:34:93.19:1054,93,0	0/0:24,0:24:69.20:0,69,957	0/0:28,0:28:78.25:0,78,1094	0/0:14,0:14:42.11:0,42,567	1/1:1,29:30:84.19:1041,84,0	1/1:0,22:22:63.20:780,63,0	0/0:27,0:27:78.25:0,78,1105	0/0:24,0:24:66.21:0,66,934	0/0:30,0:30:90.30:0,90,1294	1/1:0,34:34:81.21:986,81,0	0/0:24,0:24:63.19:0,63,883	0/0:13,0:13:39.12:0,39,526	0/0:21,0:21:60.18:0,60,829	0/0:28,0:28:81.27:0,81,1165	1/1:1,21:22:54.17:667,54,0	1/1:0,19:19:48.15:593,48,0	1/1:1,28:29:78.25:966,78,0	0/0:24,0:24:72.23:0,72,1020	0/0:27,0:27:78.26:0,78,1108	0/0:35,0:35:99:0,105,1489	0/0:14,0:14:39.10:0,39,522
chr10	59195364	.	AT	A	966.60	PASS	AB=0.870;AC=7;AF=0.125;AN=56;BaseQRankSum=6.757;DP=484;FS=6.115;HRun=11;HaplotypeScore=53.3266;InbreedingCoeff=0.5948;MQ=71.51;MQ0=0;MQRankSum=0.100;QD=13.61;ReadPosRankSum=-0.682;VQSLOD=3.2780;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:39.05:0,39,398	1/1:1,12:13:32.94:271,33,0	0/0:16,1:15:0.08:0,0,130	0/0:8,0:7:6.02:0,6,64	0/0:21,1:24:35.18:0,35,526	0/0:10,0:10:6.02:0,6,64	0/0:13,0:13:9.02:0,9,94	1/1:1,24:26:73.92:590,74,0	0/0:22,1:23:38.45:0,38,588	0/0:23,0:23:57.14:0,57,603	0/0:20,1:21:32.45:0,32,535	0/0:17,0:17:15.04:0,15,159	0/0:7,0:7:3.01:0,3,32	0/0:13,0:13:24.06:0,24,256	0/0:21,0:21:60.13:0,60,625	0/0:17,0:17:20.55:0,21,423	1/1:2,10:12:26.97:222,27,0	0/0:23,1:24:44.51:0,45,670	0/0:33,1:34:68.54:0,69,902	0/0:21,0:21:57.02:0,57,573	0/0:11,0:11:5.60:0,6,254	0/0:11,0:11:15.03:0,15,155	0/0:11,0:11:8.98:0,9,83	0/0:5,0:5:3.01:0,3,32	0/0:27,0:27:75.15:0,75,777	0/1:17,3:20:28.82:29,0,339	0/0:27,0:27:69.16:0,69,728	0/0:12,0:13:23.86:0,24,221
chr10	59197511	.	G	GT	2532.41	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-11.213;DP=725;FS=2.983;HRun=1;HaplotypeScore=68.7699;InbreedingCoeff=0.9824;MQ=76.76;MQ0=0;MQRankSum=-0.476;QD=37.80;ReadPosRankSum=-2.317;VQSLOD=3.2246;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,153,1971	1/1:0,10:10:30.10:450,30,0	0/0:16,0:16:41.02:0,41,453	0/0:13,0:13:9.82:0,10,268	0/0:25,0:25:72.23:0,72,934	0/0:22,0:22:63.20:0,63,817	0/0:33,0:33:93.30:0,93,1206	1/1:3,25:28:75.24:1102,75,0	0/0:29,0:29:87.28:0,87,1126	0/0:32,0:32:87.07:0,87,1103	0/0:21,0:21:60.19:0,60,779	0/0:35,0:35:99:0,102,1323	0/0:32,0:32:96.31:0,96,1244	0/0:25,0:25:75.22:0,75,945	0/0:29,0:29:87.28:0,87,1128	0/0:23,0:23:66.21:0,66,857	1/1:0,29:29:75.25:1124,75,0	0/0:28,0:28:84.27:0,84,1089	0/0:24,0:24:72.23:0,72,922	0/0:21,0:21:57.19:0,57,740	0/0:24,0:24:69.21:0,69,881	0/0:19,0:19:57.18:0,57,738	0/0:20,0:20:57.18:0,57,728	0/0:26,0:26:78.25:0,78,1013	0/0:24,0:24:69.21:0,69,881	0/0:36,0:36:99:0,108,1401	0/0:34,0:34:99:0,102,1294	0/0:14,0:14:42.12:0,42,529
chr10	59199376	.	GT	G	3863.47	PASS	AB=0.894;AC=16;AF=0.286;AN=56;BaseQRankSum=9.441;DP=667;FS=21.546;HRun=9;HaplotypeScore=73.6970;InbreedingCoeff=0.7966;MQ=75.70;MQ0=0;MQRankSum=1.120;QD=16.23;ReadPosRankSum=4.844;VQSLOD=2.4821;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:97.13:0,97,1080	0/0:7,0:7:21.04:0,21,225	0/0:30,2:27:2.22:0,2,407	0/0:15,0:13:2.99:0,3,157	0/0:20,0:20:48.55:0,49,520	1/1:2,23:25:60.03:549,60,0	1/1:2,26:28:78.04:714,78,0	0/0:27,1:28:38.69:0,39,665	0/0:15,0:15:39.09:0,39,429	0/0:33,0:33:72.16:0,72,807	0/0:24,0:25:66.02:0,66,731	1/1:2,25:28:65.06:583,65,0	1/1:1,23:24:59.88:549,60,0	0/0:21,0:21:42.11:0,42,468	0/0:21,0:21:57.11:0,57,625	0/0:25,0:25:63.15:0,63,700	0/1:30,3:33:4.20:4,0,695	0/0:17,0:17:48.12:0,48,542	0/0:20,0:20:54.07:0,54,589	0/0:26,0:26:63.17:0,63,712	0/1:23,4:27:10.20:10,0,646	1/1:2,22:24:45:412,45,0	1/1:0,23:23:54.02:494,54,0	1/1:3,23:26:60.03:549,60,0	0/0:25,0:25:69.17:0,69,770	0/0:24,0:24:69.19:0,69,780	0/0:26,0:26:66.16:0,66,741	0/0:11,0:12:35.92:0,36,382
chr10	59202307	.	AGTGTGT	A	830.13	PASS	AC=10;AF=0.192;AN=52;BaseQRankSum=3.491;DP=608;FS=0.000;HRun=0;HaplotypeScore=122.6475;InbreedingCoeff=0.8523;MQ=75.72;MQ0=35;MQRankSum=-1.749;QD=8.47;ReadPosRankSum=1.837;VQSLOD=2.5031;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:21,6:28:9.03:145,9,0	0/0:4,0:7:9.03:0,9,244	./.	./.	1/1:11,12:24:30.35:377,30,0	0/0:21,0:30:24.07:0,24,531	0/0:19,0:26:18.06:0,18,427	0/0:34,0:34:26.09:0,26,534	1/1:10,8:18:12.04:217,12,0	0/0:17,0:21:39.10:0,39,927	0/0:12,0:12:12.03:0,12,292	0/0:9,0:20:8.96:0,9,192	0/0:5,0:12:9.03:0,9,236	0/0:20,0:19:39.13:0,39,993	0/0:15,0:14:18.02:0,18,493	1/1:11,5:16:9.03:184,9,0	0/0:14,0:16:26.23:0,26,712	1/1:11,1:12:3.01:61,3,0	0/0:13,0:13:14.06:0,14,259	0/0:13,0:14:20.57:0,21,525	0/0:20,0:23:45.13:0,45,1201	0/0:22,0:22:23.10:0,23,522	0/0:9,0:19:11.79:0,12,261	0/0:13,0:20:21.99:0,22,483	0/0:12,0:12:18.06:0,18,551	0/0:20,0:20:23.59:0,24,637	0/0:16,0:17:33.10:0,33,889	0/0:15,0:15:36.10:0,36,1016
chr10	59202325	.	T	TGTGT	1133.99	PASS	AB=1.000;AC=19;AF=0.352;AN=54;BaseQRankSum=-3.325;DP=622;FS=0.000;HRun=0;HaplotypeScore=114.0372;InbreedingCoeff=0.6108;MQ=55.38;MQ0=35;MQRankSum=1.961;QD=4.57;ReadPosRankSum=1.508;VQSLOD=2.0709;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:32:14.66:0,15,106	1/1:6,0:6:5.62:27,6,0	0/1:44,0:16:0:0,0,0	./.	0/0:27,0:27:10.16:0,10,72	1/1:30,0:30:11.14:166,11,0	1/1:29,0:29:8.77:154,9,0	0/0:32,0:31:8.99:0,9,115	0/0:18,0:18:9.01:0,9,84	0/0:28,0:28:23.64:0,24,310	0/1:14,0:14:15.48:15,0,39	1/1:19,0:18:6.02:141,6,0	1/1:10,0:10:9.01:165,9,0	0/0:22,0:21:19.29:0,19,280	0/0:14,0:14:15.04:0,15,204	0/0:17,0:17:9.01:0,9,84	0/1:21,0:21:15.60:16,0,84	0/0:11,0:11:3.89:0,4,30	0/0:14,0:14:3.48:0,3,47	0/0:20,0:20:18.51:0,19,233	0/0:28,0:28:35.95:0,36,384	1/1:17,10:27:12.03:199,12,0	1/1:21,0:20:7.43:152,7,0	1/1:26,0:26:14.64:278,15,0	0/0:16,0:15:4.99:0,5,180	0/0:23,0:23:4.56:0,5,224	0/0:14,0:14:27.04:0,27,311	0/0:15,0:15:26.89:0,27,311
chr10	59205892	.	A	AC	1264.46	PASS	AB=0.923;AC=7;AF=0.125;AN=56;BaseQRankSum=-7.450;DP=665;FS=0.556;HRun=8;HaplotypeScore=69.3712;InbreedingCoeff=0.8955;MQ=85.50;MQ0=1;MQRankSum=-1.848;QD=18.33;ReadPosRankSum=-2.148;VQSLOD=3.0600;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,123,1120	1/1:1,14:15:33.07:367,33,0	0/0:29,1:30:31.24:0,31,522	0/0:19,0:18:18.12:0,18,268	0/0:19,0:19:57:0,57,512	0/0:21,0:21:57.01:0,57,516	0/0:26,0:27:58.97:0,59,518	1/1:4,17:21:48.09:520,48,0	0/0:23,0:23:63.03:0,63,577	0/0:20,0:19:42.01:0,42,384	0/0:20,0:20:45.02:0,45,411	0/0:30,0:30:75.01:0,75,681	0/0:20,0:20:54.03:0,54,493	0/0:18,0:18:48.02:0,48,439	0/0:34,0:34:90.03:0,90,823	0/0:32,0:32:78.03:0,78,714	1/1:1,20:21:45.12:519,45,0	0/1:11,1:12:1.60:2,0,242	0/0:10,0:10:30.01:0,30,271	0/0:22,0:22:60.02:0,60,544	0/0:26,0:26:65.98:0,66,592	0/0:24,0:24:63.02:0,63,577	0/0:26,0:26:63.03:0,63,576	0/0:31,0:31:80.98:0,81,729	0/0:29,0:29:50.36:0,50,618	0/0:28,0:28:57:0,57,521	0/0:23,0:23:69.02:0,69,625	0/0:14,0:14:36.02:0,36,330
chr10	59206645	.	T	TTTCTA	10163.34	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-12.075;DP=669;FS=3.981;HRun=0;HaplotypeScore=115.8432;InbreedingCoeff=0.9990;MQ=85.88;MQ0=0;MQRankSum=-7.968;QD=66.86;ReadPosRankSum=3.473;VQSLOD=6.2705;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,111,2130	0/0:8,0:8:21.07:0,21,448	0/0:25,0:25:62.30:0,62,1239	0/0:22,0:22:45.99:0,46,831	0/0:29,0:29:69.22:0,69,1379	1/1:0,13:15:36.12:1111,36,0	1/1:4,25:33:51.18:1573,51,0	0/0:20,0:20:56.87:0,57,930	0/0:30,0:30:87.30:0,87,1827	0/0:32,0:32:90.22:0,90,1693	0/0:19,0:19:54.13:0,54,1058	1/1:1,20:22:42.14:1300,42,0	1/1:0,23:25:66.23:2061,66,0	0/0:24,0:24:72.23:0,72,1469	0/0:29,0:29:81.25:0,81,1613	0/0:31,0:31:90.30:0,90,1881	0/0:19,0:19:51.14:0,51,995	0/0:20,0:20:54.19:0,54,1151	0/0:23,0:23:69.24:0,69,1447	0/0:31,0:31:87.25:0,87,1687	0/0:16,0:16:44.98:0,45,909	1/1:1,12:14:36.12:1122,36,0	1/1:0,22:23:51.18:1496,51,0	1/1:1,18:20:48.16:1502,48,0	0/0:20,0:20:57.17:0,57,1139	0/0:34,0:34:99:0,99,2048	0/0:37,0:36:99:0,102,2137	0/0:9,0:9:27.09:0,27,575
chr10	59210410	.	T	TCA	15305.70	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-12.935;DP=1037;FS=8.986;HRun=0;HaplotypeScore=144.2581;InbreedingCoeff=1.0000;MQ=62.52;MQ0=7;MQRankSum=0.071;QD=37.06;ReadPosRankSum=3.069;VQSLOD=6.0809;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:66.87:0,67,873	0/0:25,0:25:63.17:0,63,800	0/0:55,0:43:92.75:0,93,1121	0/0:68,0:47:97.69:0,98,1189	0/0:25,0:25:66:0,66,833	0/0:27,0:27:66.17:0,66,836	0/0:26,0:27:56.78:0,57,797	0/0:44,0:44:96.31:0,96,1246	0/0:35,0:35:99:0,102,1325	1/1:6,38:45:99:1938,120,0	1/1:2,20:22:45.15:765,45,0	0/0:35,0:35:96.31:0,96,1247	0/0:29,0:29:81.26:0,81,1049	1/1:4,31:34:75.26:1275,75,0	1/1:8,44:52:99:1784,105,0	0/0:30,0:30:84.27:0,84,1086	0/0:26,0:26:64.65:0,65,783	0/0:52,0:50:99:0,126,1627	1/1:6,19:24:56.68:913,57,0	1/1:2,31:34:72.25:1225,72,0	1/1:6,62:70:99:2399,141,0	0/0:38,0:38:99:0,102,1297	0/0:31,0:31:84.19:0,84,1041	0/0:39,0:37:99:0,99,1271	1/1:3,29:32:69.24:1174,69,0	1/1:7,29:36:51.27:1401,51,0	1/1:5,31:37:84.29:1412,84,0	1/1:2,22:24:60.21:1020,60,0
chr10	59211422	.	A	AT	4055.92	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-12.197;DP=627;FS=2.202;HRun=8;HaplotypeScore=57.5401;InbreedingCoeff=0.9898;MQ=75.75;MQ0=0;MQRankSum=-1.035;QD=28.17;ReadPosRankSum=2.398;VQSLOD=4.1756;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,105,961	0/0:9,0:9:18.01:0,18,165	0/0:15,0:15:32.96:0,33,289	0/0:9,0:9:10.09:0,10,94	0/0:25,0:25:57.01:0,57,518	1/1:4,22:26:57.17:658,57,0	1/1:0,22:22:57.17:658,57,0	0/0:28,0:28:69.03:0,69,629	0/0:14,0:14:39.02:0,39,357	0/0:23,0:23:57.02:0,57,522	0/0:22,0:21:54.03:0,54,494	1/1:2,19:21:32.71:628,33,0	1/1:5,18:23:51.15:588,51,0	0/0:18,0:18:36:0,36,329	0/0:29,0:29:72.01:0,72,654	0/0:32,0:32:84.01:0,84,764	0/0:24,0:24:66:0,66,594	0/0:26,1:27:43.41:0,43,648	0/0:19,0:19:54.03:0,54,494	0/0:27,0:27:74.95:0,75,660	0/0:17,0:17:41.99:0,42,379	1/1:1,22:23:60.18:692,60,0	1/1:1,13:14:39.12:450,39,0	1/1:1,14:15:33.10:381,33,0	0/0:21,0:21:63.02:0,63,573	0/0:45,0:45:99:0,123,1108	0/0:31,0:31:84.02:0,84,764	0/0:12,0:12:33.02:0,33,302
chr10	59213472	.	CG	C	6039.65	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=11.665;DP=593;FS=1.557;HRun=1;HaplotypeScore=58.1769;InbreedingCoeff=0.9969;MQ=93.96;MQ0=0;MQRankSum=-5.806;QD=38.97;ReadPosRankSum=0.893;VQSLOD=5.4027;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,150,2346	0/0:6,0:6:18.06:0,18,287	0/0:29,0:29:74.79:0,75,1289	0/0:27,0:27:66.18:0,66,979	0/0:12,0:12:33.11:0,33,526	1/1:0,14:14:39.13:545,39,0	1/1:0,35:35:87.29:1217,87,0	0/0:25,0:25:72.24:0,72,1127	0/0:14,0:14:42.14:0,42,670	0/0:13,0:13:39.13:0,39,623	0/0:11,0:11:30.10:0,30,479	1/1:0,26:26:75.25:1049,75,0	1/1:0,22:22:66.22:921,66,0	0/0:22,0:22:66.21:0,66,1030	0/0:23,0:23:69.22:0,69,1080	0/0:21,0:21:63.21:0,63,1006	0/0:32,0:32:96.33:0,96,1517	0/0:34,0:34:99:0,99,1577	0/0:15,0:15:45.15:0,45,700	0/0:11,0:11:30.10:0,30,479	0/0:33,0:33:99:0,99,1510	1/1:0,9:9:27.09:377,27,0	1/1:0,11:11:33.11:461,33,0	1/1:0,38:38:99:1469,105,0	0/0:8,0:8:24.07:0,24,356	0/0:19,0:19:54.17:0,54,827	0/0:26,0:26:78.27:0,78,1244	0/0:7,0:7:21.07:0,21,335
chr10	59214171	.	G	GA	1005.57	PASS	AB=1.000;AC=8;AF=0.148;AN=54;BaseQRankSum=1.234;DP=472;FS=32.387;HRun=7;HaplotypeScore=89.9621;InbreedingCoeff=0.6399;MQ=52.60;MQ0=17;MQRankSum=-1.749;QD=13.59;ReadPosRankSum=-2.860;VQSLOD=0.7774;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:21:3.61:0,4,64	1/1:3,4:6:12.04:145,12,0	./.	0/1:4,0:3:4.30:4,0,10	0/0:24,0:24:35.28:0,35,339	0/0:26,0:26:48:0,48,462	0/0:16,0:15:14.46:0,14,134	1/1:7,6:11:15:153,15,0	0/1:18,0:17:15.14:15,0,199	0/0:26,0:23:39.99:0,40,401	0/0:21,0:21:33.04:0,33,318	0/0:16,0:16:14.83:0,15,134	0/0:16,0:15:26.99:0,27,251	0/0:11,0:11:29.96:0,30,289	0/0:17,0:16:21.03:0,21,203	0/0:19,0:18:15.43:0,15,263	1/1:3,28:28:69.21:831,69,0	0/0:12,0:11:20.99:0,21,202	0/0:15,0:12:26.10:0,26,238	0/0:24,0:24:38.96:0,39,376	0/0:7,0:6:3:0,3,29	0/0:14,0:13:21.03:0,21,202	0/0:21,0:20:11.62:0,12,115	0/0:21,0:21:26.88:0,27,284	0/0:19,0:19:39.02:0,39,364	0/0:15,0:15:30.05:0,30,289	0/0:21,0:21:45.02:0,45,417	0/0:8,0:7:14.95:0,15,145
chr10	59214183	.	C	CAAA	1043.13	PASS	AB=0.974;AC=14;AF=0.250;AN=56;BaseQRankSum=4.810;DP=508;FS=3.257;HRun=4;HaplotypeScore=110.9209;InbreedingCoeff=0.5229;MQ=52.14;MQ0=11;MQRankSum=-6.645;QD=5.83;ReadPosRankSum=-0.692;VQSLOD=-0.5510;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:6,17:29:26.29:375,26,0	0/0:5,0:5:14.96:0,15,153	0/0:12,0:5:8.95:0,9,91	0/1:9,0:4:12.69:13,0,21	1/1:23,0:23:33:270,33,0	0/1:30,0:30:14.68:15,0,134	0/0:15,0:15:2.03:0,2,68	0/0:21,0:19:39.01:0,39,468	1/1:16,0:14:15.41:123,15,0	0/0:27,0:26:62.97:0,63,721	0/0:27,0:27:40:0,40,421	0/0:14,0:14:17.35:0,17,131	0/1:13,0:13:22.22:22,0,24	0/0:10,0:10:26.25:0,26,334	0/0:17,0:16:17.76:0,18,210	1/1:22,0:21:47.25:339,47,0	0/0:34,0:32:67.12:0,67,934	1/1:8,0:7:4.70:26,5,0	0/0:13,0:12:6.08:0,6,262	0/0:19,0:23:26.40:0,26,347	0/0:10,0:10:12.02:0,12,156	0/0:14,0:12:8.73:0,9,71	0/0:18,0:17:20.50:0,21,142	0/1:24,0:25:37.21:37,0,39	0/0:18,0:20:47.79:0,48,556	0/0:17,0:17:36.05:0,36,404	0/0:19,0:23:41.35:0,41,504	0/0:6,0:6:18:0,18,197
chr10	59214186	.	AAG	A	948.74	PASS	AB=0.972;AC=17;AF=0.304;AN=56;BaseQRankSum=-0.904;DP=508;FS=2.092;HRun=0;HaplotypeScore=86.2654;InbreedingCoeff=0.1764;MQ=51.88;MQ0=12;MQRankSum=-3.629;QD=3.86;ReadPosRankSum=-3.055;VQSLOD=1.2602;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:31,0:29:0.33:0,0,12	0/0:5,0:5:14.97:0,15,172	0/0:15,0:5:5.61:0,6,95	0/1:9,0:4:2.71:3,0,21	1/1:21,0:20:13.10:121,13,0	0/1:30,1:31:4.28:276,0,4	0/1:14,2:16:1.05:104,0,1	0/0:23,0:21:48.98:0,49,459	0/1:13,0:11:6.10:44,0,6	0/0:28,0:27:46.50:0,46,575	0/0:27,0:27:50.65:0,51,360	0/1:13,1:14:19.35:86,0,19	1/1:13,0:12:2.34:58,2,0	0/0:10,0:10:26.62:0,27,284	0/0:16,0:15:20.79:0,21,189	0/1:20,0:19:5.89:59,0,6	0/0:33,0:31:41.12:0,41,734	1/1:5,0:4:0.40:14,0,0	0/0:16,0:14:2.05:0,2,191	0/0:24,0:24:10.13:0,10,399	0/0:11,0:10:7.05:0,7,122	0/1:13,0:11:4.98:102,0,5	0/1:17,2:18:9.66:115,0,10	0/1:24,0:24:1.88:110,0,2	0/0:23,0:23:5.58:0,6,402	0/1:17,0:17:5.31:5,0,260	0/0:24,0:24:54.69:0,55,469	0/0:7,0:6:17.94:0,18,147
chr10	59214188	.	G	GA	1990.35	PASS	AB=0.839;AC=30;AF=0.536;AN=56;BaseQRankSum=-3.576;DP=513;FS=3.820;HRun=15;HaplotypeScore=83.8411;InbreedingCoeff=0.2838;MQ=52.95;MQ0=11;MQRankSum=-3.045;QD=5.20;ReadPosRankSum=-1.010;VQSLOD=2.4233;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:32,0:29:22.88:125,23,0	0/0:5,0:5:8.79:0,9,54	0/0:15,0:5:10.77:0,11,52	0/0:9,0:5:4.19:0,4,25	1/1:20,0:19:15.33:83,15,0	0/1:30,0:30:18.07:18,0,57	0/0:17,0:17:5.15:0,5,37	0/0:24,0:23:21.02:0,21,189	1/1:13,0:12:11.37:52,11,0	0/1:19,10:28:3.60:261,0,4	1/1:7,18:25:22.12:260,22,0	0/0:13,0:13:11.70:0,12,60	0/1:13,0:12:18.96:19,0,21	0/1:8,2:10:23.49:40,0,23	0/1:9,7:15:12.02:19,0,12	1/1:21,0:20:10.53:100,11,0	0/0:31,0:31:52.96:0,53,304	1/1:5,0:4:4.57:30,5,0	1/1:10,8:16:14.62:203,15,0	0/1:22,2:24:2.05:161,0,2	0/1:3,8:11:3.03:85,0,3	0/0:12,0:10:10.22:0,10,47	0/1:19,0:18:13.68:14,0,54	0/1:25,0:25:8.43:32,0,8	1/1:16,7:23:25.03:285,25,0	0/1:7,11:18:1.41:108,0,1	1/1:17,6:23:9.01:208,9,0	1/1:5,2:6:8.96:70,9,0
chr10	59217329	.	GC	G	1373.46	PASS	AB=0.607;AC=18;AF=0.333;AN=54;BaseQRankSum=4.575;DP=383;FS=27.068;HRun=12;HaplotypeScore=58.1807;InbreedingCoeff=0.6722;MQ=83.40;MQ0=1;MQRankSum=-0.226;QD=7.08;ReadPosRankSum=4.075;VQSLOD=0.3240;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:13,15:27:10.13:189,10,0	1/1:1,1:10:19.28:70,19,0	0/0:13,0:12:6.16:0,6,60	0/0:22,0:23:12.38:0,12,100	1/1:7,5:13:13.92:99,14,0	0/1:4,5:9:15.53:78,0,16	0/1:6,18:24:10.10:298,0,10	1/1:10,0:17:15.48:44,15,0	1/1:7,14:23:33.88:244,34,0	0/0:3,0:8:17.90:0,18,139	0/0:3,0:3:2.94:0,3,18	0/0:10,0:10:20.98:0,21,180	0/0:17,1:18:15.80:0,16,313	0/0:11,0:11:23.72:0,24,169	0/0:5,0:10:2.84:0,3,15	1/1:5,16:21:41.76:325,42,0	1/1:2,0:29:44.80:129,45,0	1/1:4,0:20:31.44:90,31,0	0/0:7,0:7:11.72:0,12,88	0/0:6,0:6:5.92:0,6,49	0/0:12,0:16:11.83:0,12,93	0/0:5,0:5:6.01:0,6,61	0/0:6,0:6:15.02:0,15,146	0/0:19,0:22:41.75:0,42,394	0/0:3,0:3:2.99:0,3,23	0/0:6,0:7:8.94:0,9,69	0/0:6,0:18:9.16:0,9,60	./.
chr10	59218045	.	GGTGTGTGT	G	1041.42	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=5.742;DP=527;FS=0.897;HRun=0;HaplotypeScore=128.5700;InbreedingCoeff=0.9137;MQ=70.84;MQ0=21;MQRankSum=-3.829;QD=11.32;ReadPosRankSum=-1.563;VQSLOD=2.5666;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:23:5.95:57,6,0	0/0:7,0:7:21.07:0,21,569	0/0:26,0:17:11.09:0,11,313	0/0:30,0:22:18.06:0,18,543	1/1:12,3:15:15.05:363,15,0	0/0:23,0:22:35.20:0,35,946	0/0:25,0:24:39.61:0,40,1005	0/0:28,0:26:42.11:0,42,1074	1/1:23,0:22:12.04:274,12,0	0/0:20,0:20:54.17:0,54,1539	0/0:13,0:13:18.03:0,18,390	0/0:13,0:12:21.07:0,21,631	0/0:14,0:14:20.55:0,21,282	0/0:16,0:15:21.07:0,21,678	0/0:20,0:20:30.10:0,30,942	1/1:14,0:14:9.03:207,9,0	0/0:18,0:17:33.11:0,33,923	1/1:6,9:14:12.04:300,12,0	0/0:16,0:19:21.34:0,21,676	0/0:9,0:8:24.07:0,24,671	0/0:22,0:21:33.11:0,33,953	0/0:20,0:19:39.13:0,39,1086	0/0:13,0:12:12.43:0,12,308	0/0:33,0:33:20.89:0,21,671	0/0:11,0:10:21.54:0,22,672	0/0:16,0:16:30.05:0,30,815	0/0:20,0:19:39.13:0,39,1019	0/0:16,0:14:18.06:0,18,601
chr10	59218061	.	TGTGTGTGTGAGAGAGAGAGA	T	1652.27	PASS	AB=1.000;AC=12;AF=0.214;AN=56;BaseQRankSum=6.380;DP=492;FS=0.000;HRun=0;HaplotypeScore=185.5493;InbreedingCoeff=0.7352;MQ=48.10;MQ0=25;MQRankSum=-5.286;QD=12.33;ReadPosRankSum=2.730;VQSLOD=2.6349;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,17:23:2.06:155,2,0	0/0:10,0:10:27.05:0,27,705	0/0:13,0:5:12.04:0,12,315	0/0:17,0:9:18.06:0,18,543	1/1:18,0:18:13.78:361,14,0	0/0:23,0:21:27.96:0,28,1034	0/1:23,0:22:37.02:37,0,1018	0/0:24,0:19:57.06:0,57,1291	1/1:7,19:24:15.05:661,15,0	0/0:24,0:24:66.22:0,66,2399	0/0:13,0:12:24.05:0,24,830	0/0:10,0:9:21.07:0,21,658	0/1:10,0:10:1.02:1,0,274	0/0:18,0:14:27.05:0,27,1370	0/0:19,0:19:36.12:0,36,1919	1/1:4,1:17:8.99:300,9,0	0/0:19,0:18:36.12:0,36,1471	1/1:13,0:12:11.60:299,12,0	0/0:18,0:13:30.21:0,30,1561	0/0:13,0:12:30.09:0,30,1797	0/0:21,0:20:48.16:0,48,2177	0/0:19,0:18:39.13:0,39,1355	0/0:9,0:8:12.35:0,12,341	0/0:25,0:25:20.69:0,21,714	0/0:14,0:12:27.98:0,28,1212	0/0:19,0:19:51.13:0,51,2607	0/0:21,0:19:45.15:0,45,1748	0/0:9,0:7:21.07:0,21,1175
chr10	59218067	.	TGTGAGAGAGAGAGA	T	1272.70	PASS	AB=0.964;AC=15;AF=0.268;AN=56;BaseQRankSum=5.207;DP=469;FS=0.663;HRun=0;HaplotypeScore=136.2435;InbreedingCoeff=0.3427;MQ=46.80;MQ0=26;MQRankSum=-4.794;QD=6.49;ReadPosRankSum=1.150;VQSLOD=2.1470;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:24:0.95:96,0,1	0/0:9,0:9:18.79:0,19,157	0/0:9,0:2:3.01:0,3,34	0/0:11,0:4:8.99:0,9,85	1/1:18,0:17:13.75:75,14,0	0/1:16,8:22:99:158,0,176	0/1:23,0:22:99:116,0,172	0/0:23,0:16:11.63:0,12,294	1/1:26,0:23:14.97:425,15,0	0/0:22,0:22:28.59:0,29,876	0/1:12,0:11:3.63:4,0,479	0/1:10,0:9:4.66:5,0,116	0/1:10,0:10:17.91:228,0,18	0/0:17,0:13:26.99:0,27,794	0/0:18,0:18:33:0,33,988	1/1:16,0:16:9.01:234,9,0	0/0:19,0:18:11.43:0,11,624	1/1:13,0:12:11.24:65,11,0	0/1:16,0:11:35.79:36,0,789	0/0:12,0:11:2.47:0,2,1084	0/0:21,0:20:8.49:0,8,1145	0/0:20,0:19:35.94:0,36,356	0/0:10,0:9:9.23:0,9,64	0/0:26,0:26:20.39:0,20,158	0/0:13,0:11:24.50:0,24,609	0/0:15,0:15:42.11:0,42,1622	0/0:19,0:17:14.24:0,14,724	0/0:9,0:6:18.06:0,18,712
chr10	59218069	.	TGAGAGAGAGAGA	T	1108.35	PASS	AB=0.821;AC=13;AF=0.260;AN=50;BaseQRankSum=5.710;DP=468;FS=9.944;HRun=0;HaplotypeScore=125.5107;InbreedingCoeff=0.6278;MQ=46.41;MQ0=27;MQRankSum=-4.649;QD=6.41;ReadPosRankSum=1.393;VQSLOD=2.0381;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:24:0.95:96,0,1	0/0:7,0:7:1.40:0,1,17	./.	./.	0/0:13,4:16:0.47:0,0,1	1/1:21,1:21:6.02:206,6,0	1/1:16,4:20:1.45:97,1,0	0/0:24,0:17:6.89:0,7,89	1/1:25,0:23:12.04:366,12,0	0/0:21,0:21:18.06:0,18,632	0/0:12,0:11:9.03:0,9,409	./.	1/1:5,4:10:9.03:290,9,0	0/0:17,0:13:15.01:0,15,608	0/0:18,0:18:18.06:0,18,692	1/1:15,0:17:9.03:192,9,0	0/0:13,0:18:18.06:0,18,335	0/0:13,0:12:0:0,0,0	0/0:16,0:11:15.05:0,15,685	0/0:12,0:11:21.07:0,21,950	0/0:20,0:19:24.06:0,24,931	0/1:13,3:19:0:0,0,0	0/0:6,5:10:0.47:0,0,1	0/1:19,9:28:0:0,0,0	0/0:13,0:11:9.50:0,10,398	0/0:16,0:15:33.11:0,33,1450	0/0:20,0:19:16.30:0,16,605	0/0:11,0:8:19.58:0,20,503
chr10	59218190	.	T	TG	607.81	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-4.066;DP=572;FS=3.773;HRun=0;HaplotypeScore=102.6498;InbreedingCoeff=0.8653;MQ=53.53;MQ0=51;MQRankSum=2.877;QD=10.30;ReadPosRankSum=-1.138;VQSLOD=3.2440;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:32:58.39:0,58,229	1/1:2,5:7:3.03:75,3,0	0/0:39,0:12:6.92:0,7,102	0/0:59,0:13:15.06:0,15,165	0/0:26,0:22:36.93:0,37,143	0/0:22,0:20:38.28:0,38,149	0/0:17,0:14:26.14:0,26,119	1/1:9,15:20:28.34:332,28,0	0/0:19,0:16:15.38:0,15,129	0/0:28,0:27:62.02:0,62,486	0/0:11,0:11:17.46:0,17,128	0/0:11,0:10:20.17:0,20,76	0/0:11,0:10:18.88:0,19,76	0/0:19,0:15:36.53:0,37,282	0/0:12,0:11:27.13:0,27,209	1/1:0,0:5:4.45:13,4,0	1/1:12,7:18:40.78:328,41,0	0/0:33,0:29:70.26:0,70,386	0/0:21,0:16:45.47:0,45,329	0/0:14,0:12:25.46:0,25,187	0/0:9,0:9:25.16:0,25,185	0/0:15,0:15:25.95:0,26,108	0/0:15,0:14:20.93:0,21,76	0/0:14,0:13:24.64:0,25,96	0/0:19,0:16:42.24:0,42,315	0/0:20,0:17:47.34:0,47,374	0/0:24,0:22:63.29:0,63,429	0/0:18,0:13:20.85:0,21,158
chr10	59218709	.	A	ATTGTTT	7694	PASS	AC=14;AF=0.259;AN=54;BaseQRankSum=-9.013;DP=591;FS=2.694;HRun=0;HaplotypeScore=124.7911;InbreedingCoeff=0.9981;MQ=78.76;MQ0=0;MQRankSum=-13.047;QD=62.55;ReadPosRankSum=0.494;VQSLOD=5.3952;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:40:99:0,111,2467	0/0:11,0:11:27.09:0,27,583	0/0:19,0:18:42.14:0,42,905	0/0:23,0:23:54.14:0,54,1081	0/0:30,0:30:78.27:0,78,1695	1/1:3,17:21:54.18:1752,54,0	1/1:9,17:28:48.16:1578,48,0	0/0:30,0:30:84.26:0,84,1697	0/0:25,0:25:66.15:0,66,1374	0/0:11,0:11:27.06:0,27,554	0/0:12,0:12:30.53:0,31,542	1/1:2,14:16:33.11:1100,33,0	1/1:7,7:15:27.08:900,27,0	0/0:16,0:16:42.14:0,42,918	0/0:23,0:23:63.22:0,63,1385	0/0:25,0:25:66.23:0,66,1434	0/0:43,0:43:99:0,117,2554	0/0:26,0:26:63.20:0,63,1357	0/0:28,0:28:69.19:0,69,1432	0/0:16,0:16:45.15:0,45,1000	0/0:24,0:24:66.21:0,66,1408	1/1:5,9:14:24.08:788,24,0	1/1:1,13:14:30.57:900,31,0	1/1:5,10:15:21.07:676,21,0	0/0:21,0:21:54.16:0,54,1065	0/0:21,0:21:57.18:0,57,1212	0/0:23,0:22:60.21:0,60,1331	./.
chr10	59219040	.	C	CTT	407.92	PASS	AB=1.000;AC=19;AF=0.413;AN=46;BaseQRankSum=4.643;DP=201;FS=31.526;HRun=0;HaplotypeScore=30.9638;InbreedingCoeff=0.7060;MQ=79.44;MQ0=13;MQRankSum=0.258;QD=17.74;ReadPosRankSum=-4.662;VQSLOD=0.9929;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	1/1:3,0:3:6.02:95,6,0	0/0:11,0:10:30.10:0,30,472	0/0:15,0:11:24.06:0,24,365	1/1:2,1:3:3.01:59,3,0	./.	1/1:2,0:1:3.01:48,3,0	1/1:4,0:2:3.01:46,3,0	./.	0/0:11,0:11:33.08:0,33,510	0/0:11,0:11:30.06:0,30,445	1/1:0,1:1:3.01:57,3,0	1/1:1,0:1:3.01:48,3,0	0/0:11,0:11:27.09:0,27,440	0/0:11,0:11:33.11:0,33,538	1/1:0,2:2:6.02:114,6,0	1/1:2,0:1:3.01:40,3,0	0/1:3,0:1:0:0,0,0	0/0:13,0:11:33.11:0,33,538	0/0:14,0:14:42.14:0,42,682	0/0:11,0:11:30.10:0,30,489	1/1:1,0:1:3.01:53,3,0	./.	./.	0/0:21,0:21:60.20:0,60,975	0/0:18,0:18:54.18:0,54,865	0/0:20,0:20:60.19:0,60,939	0/0:8,0:6:18.06:0,18,294
chr10	59219622	.	T	TG	3012.10	PASS	AB=0.588;AC=29;AF=0.518;AN=56;BaseQRankSum=10.303;DP=588;FS=2.621;HRun=8;HaplotypeScore=103.9831;InbreedingCoeff=0.8742;MQ=85.39;MQ0=2;MQRankSum=-3.292;QD=9.94;ReadPosRankSum=-1.111;VQSLOD=2.1057;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:26,2:31:32.11:247,32,0	1/1:1,4:5:12.03:135,12,0	0/0:22,0:22:29.17:0,29,320	0/0:19,0:19:30.44:0,30,333	1/1:8,0:13:8.62:46,9,0	1/1:5,1:20:36.61:187,37,0	1/1:0,1:20:42.68:217,43,0	0/1:6,14:20:12.85:348,0,13	1/1:5,0:19:11.42:60,11,0	0/0:18,0:18:51.02:0,51,463	0/0:19,0:19:51.01:0,51,463	1/1:4,3:21:39.51:254,40,0	1/1:3,0:21:36.93:187,37,0	0/0:21,0:21:60.03:0,60,549	0/0:29,1:30:40.41:0,40,624	1/1:6,1:16:20.34:131,20,0	1/1:3,20:23:57.17:658,57,0	1/1:7,1:17:8.51:44,9,0	0/0:17,0:18:47.06:0,47,417	0/0:15,1:16:1.40:0,1,267	0/0:31,0:31:81.02:0,81,736	1/1:3,0:19:39.77:202,40,0	1/1:4,0:14:22.70:115,23,0	1/1:7,0:42:79.61:404,80,0	0/0:25,0:26:62.06:0,62,555	0/0:19,0:19:48:0,48,435	0/0:25,0:24:63.02:0,63,576	0/0:21,0:21:57:0,57,516
chr10	59221654	.	A	AAC	679.69	PASS	AB=0.990;AC=17;AF=0.304;AN=56;BaseQRankSum=8.509;DP=511;FS=0.000;HRun=0;HaplotypeScore=140.1521;InbreedingCoeff=0.4908;MQ=65.81;MQ0=3;MQRankSum=-4.605;QD=3.09;ReadPosRankSum=-2.940;VQSLOD=1.7758;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,1:37:4.35:0,4,244	0/0:4,0:4:6.76:0,7,40	0/0:29,0:23:39.02:0,39,470	0/0:31,0:25:46.25:0,46,528	0/0:4,0:4:5.81:0,6,32	1/1:16,0:16:1.36:68,1,0	1/1:34,2:35:9.92:134,10,0	0/0:18,0:18:11.33:0,11,160	0/1:18,1:18:34.92:66,0,35	0/0:12,0:12:20.98:0,21,217	0/0:7,0:7:9.03:0,9,111	1/1:19,0:17:23.81:182,24,0	1/1:16,0:15:26.11:183,26,0	0/0:23,0:23:57.16:0,57,682	0/0:17,0:17:42.07:0,42,491	0/1:18,0:18:2.85:76,0,3	0/1:27,0:27:37.52:38,0,207	0/1:20,0:20:30.58:31,0,171	0/0:11,0:11:9:0,9,96	0/0:5,0:5:9.03:0,9,112	0/0:39,0:39:99:0,99,1225	0/1:5,0:4:0:0,0,0	1/1:10,0:10:5.79:48,6,0	1/1:34,0:33:3.81:26,4,0	0/0:12,0:12:33.10:0,33,402	0/0:16,0:16:35.84:0,36,409	0/0:14,0:14:15.05:0,15,185	0/0:10,0:10:30.08:0,30,360
chr10	59221688	.	C	CCA	72.14	PASS	AB=0.860;AC=2;AF=0.036;AN=56;BaseQRankSum=2.592;DP=465;FS=3.495;HRun=0;HaplotypeScore=112.9820;InbreedingCoeff=0.0672;MQ=53.74;MQ0=5;MQRankSum=-2.674;QD=1.85;ReadPosRankSum=-2.340;VQSLOD=2.0175;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:9.84:0,10,131	0/1:3,0:3:35.62:36,0,39	0/0:39,0:18:11.61:0,12,182	0/0:36,0:19:11.27:0,11,192	0/0:4,0:4:0:0,0,0	0/0:9,0:9:2.33:0,2,40	0/0:36,0:35:28.50:0,29,332	0/0:4,0:4:9.03:0,9,136	0/0:19,0:19:17.62:0,18,214	0/0:8,0:8:12.04:0,12,191	0/0:4,0:4:12.04:0,12,190	0/0:22,0:20:26.59:0,27,380	0/0:15,0:14:28.85:0,29,312	0/0:17,0:17:48.16:0,48,781	0/0:16,0:16:45.15:0,45,729	0/0:16,0:16:11.61:0,12,148	0/1:22,14:36:99:124,0,514	0/0:22,0:23:20.61:0,21,407	0/0:24,0:22:41.07:0,41,437	0/0:5,0:5:12.04:0,12,192	0/0:45,0:44:99:0,108,1500	0/0:7,0:7:8.35:0,8,104	0/0:7,0:7:8.53:0,9,117	0/0:23,0:22:11.40:0,11,165	0/0:8,0:8:24.07:0,24,366	0/0:9,0:8:21.06:0,21,319	0/0:3,0:3:6.02:0,6,97	0/0:9,0:9:27.09:0,27,423
chr10	59221692	.	CCA	C	692.76	PASS	AB=0.834;AC=15;AF=0.268;AN=56;BaseQRankSum=8.540;DP=385;FS=24.534;HRun=0;HaplotypeScore=79.8684;InbreedingCoeff=0.4396;MQ=57.37;MQ0=7;MQRankSum=-5.457;QD=6.19;ReadPosRankSum=0.776;VQSLOD=1.1279;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,1:7:2.14:23,2,0	0/1:3,0:3:15.49:15,0,55	0/0:36,0:17:15.12:0,15,161	0/0:33,0:16:10.76:0,11,108	0/1:0,1:5:0:0,0,0	0/0:5,1:6:6.17:0,6,57	0/0:18,0:18:29.46:0,29,291	1/1:2,0:2:3:26,3,0	1/1:3,6:10:14.99:213,15,0	0/0:7,0:6:12.04:0,12,231	0/0:4,0:4:12.02:0,12,191	0/1:16,1:16:7.65:8,0,523	0/1:11,2:13:34.28:34,0,305	0/0:17,0:17:51.17:0,51,913	0/0:16,0:16:45.15:0,45,825	1/1:2,4:7:12:127,12,0	0/1:23,5:30:99:135,0,262	1/1:10,7:18:5.29:270,5,0	0/0:25,0:23:33.07:0,33,602	0/0:5,0:5:9.03:0,9,157	0/0:48,0:46:99:0,120,1883	0/0:7,0:7:12.51:0,13,224	0/0:6,0:6:12:0,12,148	0/0:20,0:20:24.55:0,25,446	0/0:7,0:7:21.07:0,21,345	0/0:8,0:7:18.06:0,18,327	0/0:2,0:2:6.02:0,6,108	0/0:8,0:8:24.08:0,24,424
chr10	59221698	.	CCA	C	224.98	PASS	AB=0.772;AC=7;AF=0.125;AN=56;BaseQRankSum=7.759;DP=390;FS=13.249;HRun=0;HaplotypeScore=80.3200;InbreedingCoeff=0.2091;MQ=57.35;MQ0=9;MQRankSum=-6.633;QD=2.74;ReadPosRankSum=2.345;VQSLOD=0.8725;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:4,1:6:3.33:0,3,8	0/0:2,0:2:5.99:0,6,82	0/0:34,0:16:48.05:0,48,708	0/0:32,0:15:38.09:0,38,607	0/1:4,1:5:0:0,0,0	0/0:6,1:7:11.15:0,11,149	0/0:21,0:21:47.79:0,48,859	0/0:3,0:1:3.01:0,3,55	1/1:1,6:8:11.54:64,12,0	0/0:7,0:6:18.06:0,18,310	0/0:4,0:4:12.04:0,12,218	0/0:15,1:16:23.70:0,24,700	0/1:11,2:13:26.92:27,0,489	0/0:17,0:17:51.17:0,51,988	0/0:18,0:18:51.16:0,51,949	0/1:2,4:7:27.57:44,0,28	0/1:26,6:31:49.62:50,0,551	0/1:9,8:17:99:164,0,327	0/0:23,0:21:63.03:0,63,1066	0/0:5,0:5:9.03:0,9,171	0/0:49,0:45:99:0,125,2278	0/0:7,0:7:18.53:0,19,358	0/0:7,0:7:15.05:0,15,290	0/0:20,0:20:27.98:0,28,530	0/0:9,0:9:27.05:0,27,436	0/0:9,0:8:24.05:0,24,426	0/0:3,0:3:9.03:0,9,173	0/0:9,0:9:27.09:0,27,497
chr10	59221704	.	CCA	C	426.25	PASS	AB=0.743;AC=6;AF=0.107;AN=56;BaseQRankSum=7.480;DP=396;FS=9.271;HRun=0;HaplotypeScore=79.3660;InbreedingCoeff=0.2812;MQ=57.39;MQ0=11;MQRankSum=-5.580;QD=8.04;ReadPosRankSum=1.688;VQSLOD=2.5077;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:4,2:6:6.38:0,6,41	0/0:2,0:2:6.02:0,6,116	0/0:34,0:16:39.56:0,40,658	0/0:31,0:15:39.50:0,39,578	0/1:4,1:5:0:0,0,0	0/0:5,1:6:12.31:0,12,168	0/0:25,0:25:67.11:0,67,1190	0/0:5,0:3:9.03:0,9,164	1/1:3,7:10:14.99:214,15,0	0/0:8,0:6:18.06:0,18,347	0/0:3,0:3:9.03:0,9,176	0/0:18,1:19:6.33:0,6,813	0/1:12,2:14:18.27:18,0,568	0/0:18,0:18:54.19:0,54,1048	0/0:17,0:17:48.16:0,48,905	0/1:2,5:7:56.15:79,0,56	0/0:29,3:31:32.23:0,32,808	0/1:9,8:17:99:234,0,279	0/0:18,0:16:48.15:0,48,880	0/0:4,0:4:9.03:0,9,171	0/0:47,0:43:99:0,120,2195	0/0:7,0:7:18.53:0,19,358	0/0:7,0:7:15.52:0,16,291	0/0:21,0:21:37.35:0,37,650	0/0:8,0:8:21.07:0,21,401	0/0:11,0:8:24.08:0,24,467	0/0:5,0:5:15.05:0,15,291	0/0:9,0:9:27.08:0,27,485
chr10	59221716	.	CCA	C	55.95	PASS	AB=0.806;AC=3;AF=0.054;AN=56;BaseQRankSum=4.555;DP=412;FS=8.349;HRun=0;HaplotypeScore=81.8741;InbreedingCoeff=-0.0684;MQ=55.03;MQ0=12;MQRankSum=-2.907;QD=1.40;ReadPosRankSum=-0.420;VQSLOD=0.4457;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:17,1:18:34.80:0,35,526	0/0:2,0:2:6.02:0,6,120	0/0:23,0:13:17.51:0,18,409	0/0:25,0:9:22.28:0,22,292	0/0:6,0:6:8.93:0,9,168	0/0:8,1:9:19.85:0,20,314	0/0:25,0:25:70.79:0,71,1328	0/0:7,0:5:15.05:0,15,284	0/1:6,4:10:99:105,0,223	0/0:10,0:7:21.07:0,21,406	0/0:4,0:4:12.04:0,12,237	0/0:19,0:19:51.78:0,52,961	0/0:12,2:14:40.52:0,41,711	0/0:19,0:19:57.19:0,57,1072	0/0:17,0:17:45.15:0,45,886	0/1:8,2:10:15.09:15,0,347	0/0:35,0:34:71.57:0,72,1288	0/1:17,3:20:33.67:34,0,747	0/0:17,0:12:33.11:0,33,655	0/0:4,0:4:9.03:0,9,171	0/0:44,0:40:99:0,111,2126	0/0:8,0:8:18.53:0,19,358	0/0:6,0:6:15.52:0,16,291	0/0:21,0:21:46.04:0,46,880	0/0:7,0:7:21.07:0,21,404	0/0:17,0:14:42.14:0,42,798	0/0:7,0:7:21.07:0,21,406	0/0:8,0:8:24.08:0,24,460
chr10	59224013	.	TC	T	3210.44	PASS	AB=0.870;AC=49;AF=0.875;AN=56;BaseQRankSum=3.392;DP=449;FS=6.737;HRun=12;HaplotypeScore=75.3696;InbreedingCoeff=0.1993;MQ=69.85;MQ0=0;MQRankSum=-3.057;QD=7.43;ReadPosRankSum=4.747;VQSLOD=2.3586;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:12,8:20:20.60:161,21,0	1/1:1,1:2:1.75:21,2,0	0/1:10,0:11:8.67:9,0,101	0/0:16,1:15:9.73:0,10,73	1/1:5,4:9:14.92:116,15,0	1/1:12,7:20:28.88:212,29,0	1/1:5,14:19:38.78:301,39,0	0/1:18,2:20:14.44:14,0,29	1/1:5,8:13:24.67:205,25,0	1/1:3,0:5:2.03:6,2,0	1/1:5,0:9:3.81:11,4,0	0/1:7,6:13:1.06:78,0,1	1/1:10,11:20:26.83:246,27,0	1/1:9,0:17:22.16:63,22,0	1/1:14,0:23:13.67:40,14,0	1/1:5,19:27:62.44:457,62,0	0/1:9,1:10:30.81:31,0,63	1/1:16,14:30:44.76:347,45,0	0/1:9,0:11:8.54:9,0,27	1/1:2,1:7:8.14:24,8,0	1/1:19,0:36:30.50:87,30,0	1/1:4,7:12:25.94:190,26,0	1/1:4,6:10:20.92:162,21,0	1/1:10,18:29:14.83:356,15,0	1/1:9,0:14:16.04:47,16,0	1/1:11,0:15:15.43:44,15,0	1/1:6,0:21:27.35:79,27,0	1/1:2,0:6:9.39:27,9,0
chr10	59224223	.	T	TA	11330.25	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-14.529;DP=627;FS=0.000;HRun=1;HaplotypeScore=57.7469;InbreedingCoeff=0.9993;MQ=78.56;MQ0=0;MQRankSum=-2.288;QD=40.90;ReadPosRankSum=2.395;VQSLOD=5.3415;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,42:43:99:1698,114,0	0/0:8,0:8:24.08:0,24,309	0/0:20,0:20:53.95:0,54,637	0/0:18,0:18:51.01:0,51,603	1/1:2,23:25:66.22:981,66,0	1/1:0,13:13:33.11:495,33,0	1/1:0,21:21:60.20:899,60,0	0/0:32,0:32:90.29:0,90,1169	1/1:2,13:15:36.12:536,36,0	0/0:26,0:26:78.25:0,78,1013	0/0:21,0:21:57.15:0,57,704	1/1:0,34:34:99:1474,99,0	1/1:1,12:13:33.11:495,33,0	0/0:22,0:22:66.21:0,66,853	0/0:16,0:16:48.14:0,48,609	1/1:0,18:18:51.17:764,51,0	0/0:29,0:29:87.28:0,87,1130	1/1:0,19:19:54.18:804,54,0	0/0:21,0:21:60.18:0,60,766	0/0:18,0:18:51.17:0,51,661	0/0:38,0:38:99:0,105,1343	1/1:0,25:25:72.24:1079,72,0	1/1:3,17:20:54.18:801,54,0	1/1:0,31:31:87.29:1304,87,0	0/0:19,0:19:54.17:0,54,700	0/0:32,0:32:87.28:0,87,1130	0/0:22,0:22:63.18:0,63,801	0/0:8,0:8:24.08:0,24,312
chr10	59226604	.	AGT	A	2265.98	PASS	AB=0.972;AC=42;AF=0.808;AN=52;BaseQRankSum=2.392;DP=600;FS=8.823;HRun=0;HaplotypeScore=119.9526;InbreedingCoeff=0.4457;MQ=61.42;MQ0=9;MQRankSum=-2.388;QD=4.62;ReadPosRankSum=2.435;VQSLOD=1.7271;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:32,0:32:2.20:2,0,373	./.	1/1:23,0:15:0.89:2,1,0	./.	0/1:15,0:14:2.13:2,0,84	1/1:7,0:13:8.52:42,9,0	1/1:17,0:25:8.52:42,9,0	0/0:16,0:27:2.50:0,2,9	0/0:7,0:18:24.88:0,25,226	1/1:17,7:24:18.24:175,18,0	1/1:8,6:17:11.58:162,12,0	1/1:11,0:19:8.52:42,9,0	1/1:10,0:14:5.68:28,6,0	1/1:8,12:24:29.41:253,29,0	0/1:20,0:21:49.99:50,0,263	0/1:13,1:24:5.97:6,0,173	1/1:18,0:25:5.68:28,6,0	0/0:11,1:30:9.07:0,9,335	1/1:14,3:16:9.02:99,9,0	1/1:11,6:20:26.57:240,27,0	1/1:31,23:57:29.56:272,30,0	1/1:5,0:11:8.52:42,9,0	1/1:7,0:14:8.52:42,9,0	1/1:7,0:15:5.68:28,6,0	1/1:12,5:19:23.35:187,23,0	1/1:19,10:32:41.55:382,42,0	1/1:7,11:16:18.05:195,18,0	1/1:4,0:9:11.70:93,12,0
chr10	59230374	.	AT	A	1870.16	PASS	AC=14;AF=0.269;AN=52;BaseQRankSum=-1.151;DP=660;FS=4.247;HRun=2;HaplotypeScore=127.8072;InbreedingCoeff=0.9565;MQ=36.66;MQ0=34;MQRankSum=-1.098;QD=12.72;ReadPosRankSum=-3.480;VQSLOD=1.4478;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:39:62.93:0,63,917	0/0:13,0:10:30.10:0,30,449	./.	./.	0/0:21,0:19:36.03:0,36,470	1/1:0,17:12:27.09:350,27,0	1/1:5,18:15:24.08:311,24,0	0/0:34,0:21:63.17:0,63,915	0/0:28,0:28:71.88:0,72,1050	0/0:27,0:24:62.95:0,63,943	0/0:20,0:19:42.10:0,42,600	1/1:0,39:25:38.96:505,39,0	1/1:2,20:15:15.05:194,15,0	0/0:27,0:26:54.18:0,54,807	0/0:33,0:33:72.20:0,72,1052	0/0:24,0:24:60.16:0,60,873	0/0:31,0:30:63.21:0,63,940	0/0:29,0:29:57.17:0,57,831	0/0:23,0:15:45.08:0,45,625	0/0:31,0:27:51.17:0,51,763	0/0:36,0:24:42.13:0,42,607	1/1:0,19:15:24.08:311,24,0	1/1:0,14:11:18.06:233,18,0	1/1:0,13:9:12.04:155,12,0	0/0:20,0:19:39.56:0,40,559	0/0:29,0:29:84.28:0,84,1257	0/0:24,0:24:32.80:0,33,494	0/0:5,0:5:3.01:0,3,45
chr10	59230754	.	G	GA	2557.73	PASS	AB=0.809;AC=41;AF=0.732;AN=56;BaseQRankSum=-3.878;DP=450;FS=17.763;HRun=13;HaplotypeScore=67.4720;InbreedingCoeff=0.4669;MQ=58.23;MQ0=5;MQRankSum=-1.843;QD=6.97;ReadPosRankSum=-5.803;VQSLOD=-0.7640;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:30:13.68:0,14,85	1/1:3,2:4:8.82:64,9,0	0/1:9,0:5:12.39:12,0,19	0/0:3,0:2:5.89:0,6,37	0/1:10,0:14:3.87:4,0,26	1/1:5,0:13:4.82:41,5,0	1/1:7,1:23:25.76:143,26,0	1/1:19,10:30:14:225,14,0	0/0:2,0:13:18.32:0,18,53	1/1:7,5:11:14.96:127,15,0	1/1:12,3:14:8.95:70,9,0	1/1:7,2:22:26.03:158,26,0	1/1:7,1:15:17.29:103,17,0	1/1:0,15:15:23.63:209,24,0	1/1:4,10:15:12.19:232,12,0	0/0:4,0:17:25.35:0,25,85	0/1:13,14:27:19.67:254,0,20	0/0:1,0:20:26.44:0,26,76	1/1:5,11:16:32.74:259,33,0	1/1:14,2:13:11.19:82,11,0	1/1:4,2:13:2.84:14,3,0	1/1:3,0:5:5.78:33,6,0	1/1:6,0:5:2.94:18,3,0	1/1:3,1:14:25.67:133,26,0	0/1:4,17:21:8.70:59,0,9	1/1:5,12:18:15.18:228,15,0	1/1:8,14:22:21.02:195,21,0	0/1:8,2:9:5.69:73,0,6
chr10	59231710	.	TA	T	10002.35	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=11.806;DP=513;FS=3.492;HRun=7;HaplotypeScore=76.3164;InbreedingCoeff=0.9661;MQ=65.48;MQ0=0;MQRankSum=-1.593;QD=26.05;ReadPosRankSum=1.011;VQSLOD=5.6300;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:61.71:0,62,1041	1/1:0,10:10:24.01:234,24,0	0/0:15,0:14:8.47:0,8,341	0/0:9,0:8:20.29:0,20,201	0/0:33,0:33:84.26:0,84,1044	1/1:2,17:19:48.11:490,48,0	1/1:1,13:14:33.07:336,33,0	1/1:4,45:49:99:1324,132,0	0/0:11,0:11:30.07:0,30,353	1/1:0,11:11:33.08:337,33,0	1/1:1,18:19:51.03:498,51,0	1/1:0,12:12:36.08:367,36,0	1/1:1,14:15:39.08:398,39,0	1/1:1,16:17:42.10:428,42,0	1/1:0,23:23:69.16:704,69,0	0/0:15,0:15:45.14:0,45,555	1/1:5,17:22:48.11:490,48,0	0/0:16,0:16:45.13:0,45,552	1/1:1,27:28:81.14:807,81,0	1/1:0,16:16:45.10:459,45,0	1/1:1,12:13:33.07:337,33,0	1/1:0,7:7:18.04:184,18,0	1/1:1,21:22:57.13:581,57,0	1/1:5,3:8:6.01:61,6,0	1/1:1,17:18:48.11:489,48,0	1/1:2,21:23:63.14:643,63,0	1/1:0,15:15:30.07:306,30,0	1/1:1,22:23:37.53:531,38,0
chr10	59232844	.	CG	C	4866.35	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=16.153;DP=633;FS=0.741;HRun=2;HaplotypeScore=71.5676;InbreedingCoeff=0.9997;MQ=89.49;MQ0=0;MQRankSum=-2.966;QD=35.01;ReadPosRankSum=3.104;VQSLOD=5.3192;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,36:36:99:1227,99,0	0/0:10,0:10:27.09:0,27,399	0/0:25,0:25:75.25:0,75,1119	0/0:22,0:22:54.18:0,54,801	1/1:0,28:28:84.26:1040,84,0	0/0:25,0:25:75.24:0,75,1104	0/0:25,0:25:72.24:0,72,1075	0/0:29,0:29:84.28:0,84,1240	1/1:1,31:32:93.29:1151,93,0	0/0:27,0:27:81.27:0,81,1194	0/0:19,0:19:57.19:0,57,852	0/0:16,0:16:48.16:0,48,708	0/0:19,0:19:57.19:0,57,854	0/0:15,0:15:42.11:0,42,605	0/0:23,0:23:69.22:0,69,1015	1/1:0,15:15:42.13:520,42,0	0/0:36,0:36:99:0,105,1530	1/1:1,27:28:75.24:929,75,0	0/0:14,0:14:42.14:0,42,618	0/0:17,0:17:48.11:0,48,657	0/0:28,0:28:81.26:0,81,1191	0/0:20,0:20:60.20:0,60,897	0/0:14,0:14:42.14:0,42,629	0/0:32,0:32:96.29:0,96,1395	0/0:18,0:18:54.13:0,54,783	0/0:23,0:23:66.20:0,66,950	0/0:23,0:23:69.23:0,69,1033	0/0:14,0:14:42.14:0,42,628
chr10	59233497	.	T	TAC	6162.67	PASS	AB=0.831;AC=30;AF=0.536;AN=56;BaseQRankSum=-6.429;DP=658;FS=8.625;HRun=0;HaplotypeScore=137.1686;InbreedingCoeff=-0.2707;MQ=60.60;MQ0=12;MQRankSum=2.157;QD=11.16;ReadPosRankSum=1.352;VQSLOD=4.3658;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:32,0:37:6.04:6,0,28	1/1:11,0:10:2.10:33,2,0	0/0:35,0:22:3.24:0,3,23	0/0:30,0:21:4.50:0,4,85	0/1:22,0:22:4.46:4,0,24	0/1:10,8:17:0.88:1,0,93	0/1:29,2:31:79.27:524,0,79	0/1:18,0:18:6.96:22,0,7	0/1:23,0:29:5.39:5,0,63	0/1:11,17:28:53.44:703,0,53	1/1:9,3:13:21.05:304,21,0	0/1:8,11:20:4.64:158,0,5	0/1:16,1:17:1.60:303,0,2	0/1:13,5:18:2.58:291,0,3	0/1:12,5:16:36.19:362,0,36	0/0:18,0:23:3.69:0,4,107	1/1:26,0:28:13.29:80,13,0	0/0:16,0:18:2.49:0,2,79	1/1:17,0:17:9.83:253,10,0	0/1:17,4:20:73.49:167,0,73	0/1:49,3:49:33.84:740,0,34	0/1:11,14:25:55.75:86,0,56	0/1:6,9:15:32.08:82,0,32	0/1:30,13:42:99:904,0,135	1/1:20,8:28:36.09:519,36,0	0/1:22,2:24:41.52:352,0,42	0/1:9,2:11:48.82:214,0,49	1/1:6,0:6:5.99:49,6,0
chr10	59233536	.	G	GCA	2576.80	PASS	AB=0.865;AC=26;AF=0.464;AN=56;BaseQRankSum=0.316;DP=706;FS=9.913;HRun=0;HaplotypeScore=160.4619;InbreedingCoeff=-0.0256;MQ=50.73;MQ0=25;MQRankSum=0.762;QD=5.08;ReadPosRankSum=-1.511;VQSLOD=2.4756;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:38,0:39:20.75:37,0,21	1/1:12,0:11:12.02:153,12,0	1/1:9,0:3:3.45:23,3,0	0/0:13,0:2:2.98:0,3,21	0/1:22,0:24:2.91:63,0,3	0/0:19,0:18:16.61:0,17,142	0/0:37,0:40:47.13:0,47,578	0/1:23,0:21:2.02:136,0,2	0/1:23,0:24:35.71:36,0,38	0/1:27,1:25:65.47:110,0,65	0/1:12,6:18:77.93:78,0,87	0/0:27,0:28:47.77:0,48,471	0/0:17,0:18:31.44:0,31,331	0/1:16,9:25:99:119,0,113	0/1:13,10:21:37.15:289,0,37	0/1:19,0:22:1.99:2,0,82	1/1:12,12:24:8.75:139,9,0	0/1:18,0:19:1.48:62,0,1	0/1:16,7:22:38.46:291,0,38	1/1:13,9:21:12.04:184,12,0	0/1:52,29:78:99:312,0,246	0/0:14,0:15:20.64:0,21,181	0/0:12,0:11:0.38:0,0,19	0/0:53,0:52:74.20:0,74,773	0/1:19,13:32:81.20:266,0,81	0/1:23,10:32:99:305,0,138	1/1:7,5:16:5.95:93,6,0	1/1:4,0:3:4.26:45,4,0
chr10	59233544	.	A	ACACACG	2552.40	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=4.392;DP=725;FS=2.213;HRun=0;HaplotypeScore=193.1879;InbreedingCoeff=0.7966;MQ=51.24;MQ0=25;MQRankSum=0.454;QD=16.15;ReadPosRankSum=-0.974;VQSLOD=3.2614;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:37,1:39:1.20:575,1,0	0/0:13,0:12:10.34:0,10,79	0/0:16,0:6:7.72:0,8,59	0/0:18,0:5:11.50:0,11,123	1/1:25,1:25:29.78:453,30,0	0/0:22,0:21:31.99:0,32,422	0/0:43,0:42:98.76:0,99,1519	0/0:22,0:20:36.67:0,37,260	1/1:25,0:25:42.97:518,43,0	0/0:26,0:23:52.39:0,52,493	0/0:17,0:17:23.05:0,23,293	0/0:29,0:29:59.66:0,60,1067	0/0:19,0:19:53.78:0,54,797	0/0:26,0:26:32.70:0,33,396	0/0:25,0:23:16.30:0,16,249	1/1:22,0:22:35.68:486,36,0	0/0:25,0:25:18.78:0,19,128	1/1:21,2:22:28.67:681,29,0	0/0:24,0:23:33.34:0,33,404	0/1:23,0:22:2.81:3,0,64	0/0:83,0:78:64.35:0,64,930	0/0:14,0:14:30.53:0,31,476	0/0:10,0:9:9.01:0,9,127	0/0:50,0:49:99:0,111,1840	0/0:34,0:33:18.58:0,19,354	0/0:34,0:34:77.72:0,78,810	0/0:12,0:12:15.58:0,16,95	0/0:4,0:3:5.83:0,6,38
chr10	59235514	.	GGT	G	18101.48	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=10.945;DP=718;FS=0.651;HRun=0;HaplotypeScore=94.1499;InbreedingCoeff=0.9988;MQ=86.52;MQ0=6;MQRankSum=-4.115;QD=35.01;ReadPosRankSum=4.554;VQSLOD=7.1758;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,165,2830	1/1:0,8:8:21.07:294,21,0	0/0:29,0:29:74.18:0,74,1120	0/0:30,0:30:64.09:0,64,1035	0/0:27,0:27:75.24:0,75,1310	1/1:1,12:13:24.08:336,24,0	1/1:0,32:32:84.28:1176,84,0	1/1:5,26:31:81.23:1084,81,0	0/0:16,0:16:48.15:0,48,834	1/1:2,26:28:78.24:1059,78,0	1/1:2,23:23:54.17:740,54,0	1/1:1,25:26:66.22:924,66,0	1/1:1,18:19:54.18:756,54,0	1/1:2,22:24:57.19:798,57,0	1/1:0,22:22:57.19:798,57,0	0/0:15,0:15:45.13:0,45,775	1/1:3,27:30:72.24:1008,72,0	0/0:29,0:29:84.29:0,84,1491	1/1:1,14:15:42.10:548,42,0	1/1:0,28:28:72.20:985,72,0	1/1:3,40:42:99:1490,108,0	1/1:2,24:26:63.21:882,63,0	1/1:3,21:24:57.19:798,57,0	1/1:1,38:36:90.30:1260,90,0	1/1:2,15:17:42.14:588,42,0	1/1:1,34:35:99:1406,102,0	1/1:1,18:19:51.17:709,51,0	1/1:0,13:13:33.11:462,33,0
chr10	59235999	.	CTG	C	4842.34	PASS	AB=1.000;AC=55;AF=0.982;AN=56;BaseQRankSum=-5.023;DP=613;FS=8.095;HRun=0;HaplotypeScore=106.0326;InbreedingCoeff=-0.0499;MQ=55.68;MQ0=38;MQRankSum=0.401;QD=7.90;ReadPosRankSum=-0.772;VQSLOD=3.9202;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,26:26:2.96:19,3,0	1/1:8,0:8:9.60:64,10,0	1/1:61,0:14:0.58:46,1,0	0/1:86,0:23:59.93:60,0,67	1/1:15,1:15:8.94:68,9,0	1/1:30,0:29:18.78:296,19,0	1/1:7,6:13:20.98:250,21,0	1/1:42,0:42:82.46:678,82,0	1/1:2,15:16:9.02:110,9,0	1/1:15,0:12:35.04:245,35,0	1/1:23,0:22:38.58:307,39,0	1/1:13,1:14:17.40:142,17,0	1/1:0,14:14:5.74:61,6,0	1/1:15,0:13:17.73:142,18,0	1/1:17,1:18:15.62:108,16,0	1/1:18,0:17:16.55:138,17,0	1/1:13,0:13:17.83:126,18,0	1/1:7,0:7:18.59:112,19,0	1/1:23,0:22:46.92:319,47,0	1/1:17,0:16:10.64:80,11,0	1/1:12,0:11:11.99:101,12,0	1/1:20,0:17:26.83:216,27,0	1/1:23,1:23:20.96:186,21,0	1/1:1,11:12:6.02:91,6,0	1/1:19,0:19:23.68:198,24,0	1/1:25,0:23:27.84:374,28,0	1/1:11,0:10:8.43:97,8,0	1/1:12,1:13:21.39:208,21,0
chr10	59236020	.	TCCCTCC	T	3860.80	PASS	AB=0.945;AC=39;AF=0.722;AN=54;BaseQRankSum=-4.712;DP=472;FS=11.629;HRun=0;HaplotypeScore=94.7433;InbreedingCoeff=-0.1894;MQ=35.45;MQ0=31;MQRankSum=4.199;QD=8.83;ReadPosRankSum=1.348;VQSLOD=1.0543;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:21,0:21:6.35:128,0,6	0/1:9,0:9:29.87:104,0,30	./.	0/1:51,0:5:30.18:30,0,31	1/1:14,0:13:3.01:49,3,0	0/1:18,0:17:78.58:153,0,79	1/1:6,0:15:0.41:86,0,0	0/1:19,13:31:99:381,0,319	1/1:14,0:13:13.87:189,14,0	1/1:16,0:13:17.24:249,17,0	1/1:17,0:16:8.43:77,8,0	1/1:12,0:12:6.61:210,7,0	1/1:12,0:12:13.98:152,14,0	0/1:16,0:14:0.87:107,0,1	0/1:18,0:18:1.89:81,0,2	0/1:15,0:14:61.96:91,0,62	1/1:17,0:16:20.07:209,20,0	1/1:7,0:7:6.11:209,6,0	1/1:16,0:14:28.44:252,28,0	1/1:17,0:16:4.77:69,5,0	0/1:8,0:7:6.04:65,0,6	0/1:4,12:12:0:0,0,0	0/1:13,0:12:2.19:89,0,2	1/1:20,0:20:13.66:220,14,0	0/0:13,0:13:2.19:0,2,6	0/1:21,0:19:52.31:289,0,52	0/1:11,0:10:0.38:144,0,0	1/1:11,0:11:7.46:228,7,0
chr10	59236266	.	G	GTTCATTCA	9547.14	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=5.201;DP=458;FS=4.298;HRun=0;HaplotypeScore=123.6918;InbreedingCoeff=0.6916;MQ=61.85;MQ0=0;MQRankSum=-2.438;QD=22.10;ReadPosRankSum=2.928;VQSLOD=3.7522;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,6:21:14.18:372,14,0	1/1:4,0:9:9.01:119,9,0	0/0:11,0:10:29.94:0,30,385	0/0:15,0:15:39.08:0,39,735	1/1:3,12:17:27.29:622,27,0	1/1:4,14:18:21.53:863,22,0	1/1:6,8:16:3:72,3,0	1/1:32,0:32:25.47:353,25,0	1/1:1,12:14:12.51:493,13,0	1/1:0,0:12:28.87:351,29,0	1/1:10,0:20:20.96:261,21,0	1/1:3,10:11:8.48:368,8,0	1/1:12,0:12:17.49:541,17,0	1/1:10,0:15:26.43:287,26,0	1/1:5,0:30:48.10:588,48,0	1/1:12,0:12:17.93:330,18,0	1/1:1,0:19:36.11:472,36,0	1/1:1,4:6:3.01:122,3,0	1/1:7,0:14:25.37:280,25,0	1/1:4,0:23:47.04:575,47,0	1/1:5,0:21:25.49:322,25,0	1/1:2,2:4:6.01:245,6,0	1/1:5,13:19:14.92:445,15,0	1/1:14,2:15:24.47:473,24,0	1/1:8,0:18:12.42:147,12,0	1/1:5,0:22:45.70:482,46,0	1/1:5,0:20:23.46:284,23,0	1/1:5,0:9:6.36:79,6,0
chr10	59236439	.	TTGTGTGTG	T	692.78	PASS	AB=0.983;AC=11;AF=0.212;AN=52;BaseQRankSum=3.777;DP=429;FS=2.489;HRun=0;HaplotypeScore=120.3381;InbreedingCoeff=0.4606;MQ=58.17;MQ0=9;MQRankSum=-4.638;QD=8.45;ReadPosRankSum=2.558;VQSLOD=2.4179;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:16,9:26:0.47:0,0,1	1/1:5,0:5:8.99:127,9,0	./.	./.	1/1:13,1:14:6.02:110,6,0	0/0:15,0:17:18.06:0,18,539	0/0:14,0:14:15.05:0,15,454	0/0:23,0:22:3.01:0,3,33	1/1:2,0:4:3.01:56,3,0	0/0:19,0:20:39.11:0,39,1131	0/0:12,0:12:18.06:0,18,431	0/0:16,0:14:27.09:0,27,866	0/0:8,0:8:18.05:0,18,461	0/0:20,0:20:18.06:0,18,593	0/0:13,0:13:21.07:0,21,707	1/1:3,0:6:3.01:107,3,0	0/1:21,0:21:62.44:246,0,62	0/1:18,1:17:10.06:157,0,10	0/0:21,0:20:13.29:0,13,417	0/0:14,0:15:12.04:0,12,322	0/0:14,0:13:11.98:0,12,332	0/0:9,0:8:15.05:0,15,498	0/0:10,0:12:15.05:0,15,506	0/0:15,0:15:30.10:0,30,1008	0/0:14,0:13:17.90:0,18,675	0/0:17,0:18:24.07:0,24,548	0/0:19,0:20:27.09:0,27,971	0/1:13,0:13:32.77:33,0,288
chr10	59236442	.	TGTGTGTG	T	229.95	PASS	AB=0.985;AC=8;AF=0.143;AN=56;BaseQRankSum=6.463;DP=432;FS=7.228;HRun=0;HaplotypeScore=114.2589;InbreedingCoeff=0.0184;MQ=54.38;MQ0=12;MQRankSum=-5.080;QD=2.87;ReadPosRankSum=1.884;VQSLOD=1.4518;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:31.62:0,32,369	1/1:2,2:4:0.98:63,1,0	0/0:12,0:7:21.03:0,21,238	0/0:24,0:12:33.10:0,33,409	0/1:15,0:14:14.81:15,0,242	0/0:19,0:19:32.67:0,33,846	0/0:13,0:13:33.07:0,33,769	0/0:21,0:20:13.24:0,13,165	0/1:4,0:4:30.97:31,0,67	0/0:18,0:18:51.16:0,51,1516	0/0:13,0:13:33.11:0,33,777	0/0:18,0:16:36.12:0,36,1169	0/0:10,0:10:26.53:0,27,714	0/0:19,0:19:26.53:0,27,710	0/0:14,0:13:33.11:0,33,950	0/1:6,0:6:62.99:68,0,63	0/1:18,2:20:99:158,0,133	0/1:19,0:16:14.01:14,0,366	0/0:22,0:20:56.20:0,56,1160	0/0:16,0:16:35.88:0,36,698	0/0:16,0:15:19.66:0,20,507	0/0:12,0:10:24.08:0,24,701	0/0:12,0:12:17.93:0,18,589	0/0:17,0:16:39.06:0,39,1247	0/0:15,0:14:35.81:0,36,986	0/0:17,0:17:51.17:0,51,1053	0/0:18,0:18:51.16:0,51,1356	0/1:12,0:12:8.65:9,0,564
chr10	59237211	.	GTCTTTCTT	G	4077.76	PASS	AB=0.995;AC=24;AF=0.462;AN=52;BaseQRankSum=3.785;DP=496;FS=0.000;HRun=0;HaplotypeScore=156.4441;InbreedingCoeff=0.3124;MQ=67.37;MQ0=4;MQRankSum=-6.813;QD=14.36;ReadPosRankSum=-2.955;VQSLOD=1.5968;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:21,1:22:23.28:273,0,23	1/1:15,0:14:13.14:90,13,0	./.	./.	1/1:27,3:30:53.93:939,54,0	1/1:19,0:19:23.10:341,23,0	0/0:16,0:15:6.64:0,7,37	0/0:35,0:33:11.97:0,12,78	1/1:13,2:15:15.05:265,15,0	0/1:25,0:24:55.34:356,0,55	1/1:17,0:17:6.02:112,6,0	0/1:10,0:10:35.26:117,0,35	0/1:21,0:21:58.16:254,0,58	0/0:16,0:16:22.42:0,22,239	1/1:13,0:12:8.43:217,8,0	1/1:7,1:8:18.04:304,18,0	0/0:14,0:14:6.02:0,6,77	1/1:18,0:17:23.94:292,24,0	0/1:17,0:16:35.99:36,0,97	0/1:24,0:24:20.09:296,0,20	0/0:10,0:10:15.02:0,15,216	0/1:10,0:9:7.78:8,0,11	0/1:20,0:19:99:178,0,175	0/0:15,0:13:8.40:0,8,51	0/0:10,0:10:12.01:0,12,267	0/0:24,0:24:31.05:0,31,925	0/0:30,0:30:37.84:0,38,490	0/0:19,0:19:15.50:0,16,361
chr10	59237237	.	CTT	C	321.27	PASS	AB=0.889;AC=6;AF=0.115;AN=52;BaseQRankSum=1.268;DP=462;FS=6.334;HRun=3;HaplotypeScore=136.0725;InbreedingCoeff=-0.1498;MQ=47.78;MQ0=18;MQRankSum=-4.488;QD=3.18;ReadPosRankSum=2.434;VQSLOD=-0.2379;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,1:20:0.83:0,1,601	0/0:12,0:11:30.09:0,30,411	./.	./.	0/0:29,0:29:20.37:0,20,534	0/0:22,1:23:16.77:0,17,563	0/0:11,0:10:21.04:0,21,294	0/1:25,14:30:99:338,0,583	0/0:20,0:20:43.48:0,43,584	0/0:33,0:31:13.20:0,13,960	0/0:12,0:12:29.34:0,29,316	0/0:11,0:11:23.21:0,23,284	0/0:14,0:13:34.58:0,35,401	0/0:17,0:17:47.52:0,48,576	0/1:7,1:8:22.71:23,0,137	0/0:11,0:11:7.24:0,7,149	0/1:16,1:16:27.88:28,0,362	0/0:19,0:17:27.02:0,27,445	0/1:16,1:10:15.46:15,0,329	0/0:22,1:22:57.76:0,58,561	0/1:9,1:10:18.54:19,0,341	0/1:9,1:10:18.53:19,0,350	0/0:18,0:17:46.75:0,47,555	0/0:13,0:11:27.93:0,28,377	0/0:9,0:7:21.07:0,21,356	0/0:19,1:20:8.54:0,9,792	0/0:26,0:26:67.79:0,68,848	0/0:14,0:14:27.08:0,27,390
chr10	59237247	.	T	TTC	162.19	PASS	AB=0.915;AC=4;AF=0.077;AN=52;BaseQRankSum=-0.021;DP=423;FS=0.000;HRun=0;HaplotypeScore=141.0746;InbreedingCoeff=-0.0887;MQ=46.34;MQ0=20;MQRankSum=-2.518;QD=2.35;ReadPosRankSum=-0.322;VQSLOD=2.4710;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:21:43.44:0,43,411	0/1:8,1:8:99:125,0,108	./.	./.	0/0:29,0:29:71.38:0,71,732	0/0:17,0:17:45.08:0,45,516	0/0:8,0:6:6.91:0,7,86	0/1:33,0:24:90.78:91,0,510	0/0:17,0:17:45.08:0,45,564	0/0:31,0:29:81.23:0,81,1022	0/0:11,0:11:21.06:0,21,257	0/1:11,0:11:42.63:43,0,109	0/0:14,0:13:33.04:0,33,360	0/0:19,0:19:48.13:0,48,608	0/0:5,0:5:15.03:0,15,160	0/0:12,0:12:21:0,21,221	0/1:11,5:15:8.59:9,0,319	0/0:18,0:16:42.78:0,43,496	0/0:12,0:5:14.99:0,15,170	0/0:24,0:23:60.18:0,60,757	0/0:7,0:7:17.25:0,17,194	0/0:8,0:8:18.06:0,18,249	0/0:17,0:16:45.01:0,45,485	0/0:13,0:11:12.12:0,12,255	0/0:10,0:8:24.06:0,24,322	0/0:17,0:17:51.11:0,51,670	0/0:23,0:23:60.19:0,60,828	0/0:13,0:12:18.01:0,18,182
chr10	59237249	.	CTT	C	174.37	PASS	AB=0.875;AC=4;AF=0.077;AN=52;BaseQRankSum=2.674;DP=413;FS=1.573;HRun=3;HaplotypeScore=141.6368;InbreedingCoeff=-0.0977;MQ=46.19;MQ0=19;MQRankSum=-4.048;QD=2.64;ReadPosRankSum=2.086;VQSLOD=-0.1668;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:17:21.13:0,21,381	0/1:4,5:8:97.41:134,0,97	./.	./.	0/0:31,0:31:25.81:0,26,507	0/0:16,0:16:31.71:0,32,335	0/0:8,0:6:8.70:0,9,118	0/1:30,2:23:90.36:90,0,546	0/0:17,0:17:34.31:0,34,454	0/0:31,0:29:73.92:0,74,939	0/0:11,0:11:21.35:0,21,231	0/1:10,1:11:40.87:41,0,85	0/0:14,0:13:19.47:0,19,288	0/0:17,0:17:47.55:0,48,618	0/0:5,0:5:5.98:0,6,59	0/0:11,0:11:5.48:0,5,90	0/1:14,0:13:15.75:16,0,351	0/0:19,0:17:31.45:0,31,454	0/0:11,0:5:14.63:0,15,178	0/0:24,0:23:60.70:0,61,559	0/0:6,0:6:18.04:0,18,289	0/0:8,0:8:18.06:0,18,293	0/0:17,0:16:36.01:0,36,475	0/0:12,0:10:24.75:0,25,286	0/0:13,0:11:32.99:0,33,459	0/0:17,0:17:51.17:0,51,879	0/0:23,0:23:64.80:0,65,808	0/0:13,0:12:18.04:0,18,267
chr10	59237257	.	CCT	C	2104.46	PASS	AB=0.891;AC=17;AF=0.327;AN=52;BaseQRankSum=4.367;DP=403;FS=1.449;HRun=0;HaplotypeScore=129.6506;InbreedingCoeff=-0.4458;MQ=44.88;MQ0=17;MQRankSum=-3.527;QD=8.49;ReadPosRankSum=2.846;VQSLOD=3.4338;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:16,0:14:36.17:36,0,236	0/1:8,0:7:1.10:1,0,47	./.	./.	0/1:30,0:30:68.37:68,0,449	0/1:15,2:17:49.70:182,0,50	0/1:8,1:7:12.34:60,0,12	0/0:30,0:20:45.05:0,45,578	0/1:18,0:18:14.26:14,0,325	0/1:18,12:29:99:643,0,166	0/1:9,2:11:18.67:105,0,19	0/1:12,0:12:17.21:75,0,17	0/1:5,6:10:4.23:254,0,4	0/0:19,0:19:23.52:0,24,214	0/1:4,4:7:53.24:160,0,53	0/1:12,0:12:33.69:43,0,34	0/0:13,0:12:21.66:0,22,263	0/0:15,0:14:15.98:0,16,306	0/1:7,0:4:14.96:15,0,46	0/1:23,0:22:18.05:201,0,18	0/0:4,0:4:11.93:0,12,136	0/1:7,1:9:53.31:144,0,53	0/1:8,4:13:42.60:189,0,43	0/1:8,3:9:57.87:61,0,58	0/0:13,0:11:26.21:0,26,166	0/0:19,0:18:14.26:0,14,334	0/0:23,0:22:0.79:0,1,211	0/0:11,0:10:8.83:0,9,100
chr10	59237263	.	TTCTTTC	T	4552.36	PASS	AB=0.979;AC=32;AF=0.593;AN=54;BaseQRankSum=-0.124;DP=431;FS=4.344;HRun=0;HaplotypeScore=158.0448;InbreedingCoeff=-0.1577;MQ=45.06;MQ0=15;MQRankSum=-1.530;QD=11.79;ReadPosRankSum=1.197;VQSLOD=3.4024;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:18,0:16:54.45:54,0,75	1/1:9,0:8:11:166,11,0	0/0:4,0:1:3.01:0,3,38	./.	0/1:32,0:32:57.79:58,0,159	1/1:14,2:16:25.87:321,26,0	0/1:12,0:9:1.57:2,0,18	0/0:25,0:19:36.12:0,36,551	0/1:21,0:21:59.86:66,0,60	0/1:27,7:32:14.95:822,0,15	1/1:9,2:11:28.82:326,29,0	1/1:12,0:12:20.11:268,20,0	1/1:13,5:17:14.05:351,14,0	0/1:16,0:16:99:113,0,122	1/1:7,4:10:22.57:323,23,0	0/1:13,0:13:4.10:59,0,4	0/1:15,0:14:36.93:81,0,37	0/1:17,0:16:81.28:81,0,103	0/1:6,0:4:26.95:27,0,41	1/1:22,0:21:39.40:333,39,0	0/1:4,0:4:0.34:0,0,70	0/1:13,0:13:3.84:116,0,4	0/1:12,3:14:21.68:374,0,22	1/1:10,0:8:16.51:145,17,0	0/1:15,0:13:99:164,0,127	0/1:21,0:20:99:130,0,444	0/1:25,0:24:99:174,0,262	0/0:10,0:9:9.03:0,9,209
chr10	59237267	.	TTC	T	2755.01	PASS	AB=0.914;AC=27;AF=0.500;AN=54;BaseQRankSum=3.567;DP=434;FS=9.063;HRun=0;HaplotypeScore=129.4264;InbreedingCoeff=-0.3999;MQ=45.38;MQ0=14;MQRankSum=-0.067;QD=7.35;ReadPosRankSum=0.738;VQSLOD=2.8592;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:14,4:16:77.52:78,0,119	0/1:8,0:8:10.97:94,0,11	0/0:5,0:1:3.01:0,3,37	./.	0/1:24,9:33:99:157,0,203	0/1:13,2:15:22.80:212,0,23	0/0:12,0:9:8.38:0,8,33	0/0:25,0:18:36.12:0,36,528	0/1:15,6:21:91.38:91,0,165	0/1:33,2:33:99:443,0,102	1/1:9,2:11:15.87:154,16,0	1/1:12,0:12:11.57:163,12,0	0/1:18,0:17:2.32:168,0,2	0/1:16,0:16:3.38:3,0,93	0/1:12,0:11:29.01:184,0,29	0/1:10,4:14:9.89:95,0,10	0/1:13,1:13:24.93:25,0,125	0/1:11,7:17:99:131,0,172	1/1:5,0:3:3.25:10,3,0	1/1:14,6:19:30.38:333,30,0	0/1:5,0:5:60.57:61,0,68	0/1:12,1:13:53.10:76,0,53	0/1:13,1:14:16.66:181,0,17	0/1:9,1:8:7.58:46,0,8	0/1:17,0:15:10.16:81,0,10	0/1:23,0:22:86.73:87,0,322	0/1:22,1:22:39.52:40,0,65	0/0:10,0:9:7.26:0,7,62
chr10	59237269	.	C	CTCTT	11726.37	PASS	AB=1.000;AC=51;AF=0.944;AN=54;BaseQRankSum=-1.381;DP=439;FS=6.781;HRun=0;HaplotypeScore=118.2307;InbreedingCoeff=0.3384;MQ=45.52;MQ0=14;MQRankSum=1.185;QD=27.46;ReadPosRankSum=-0.311;VQSLOD=4.2475;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:17:41.94:676,42,0	1/1:6,0:8:18.06:223,18,0	0/0:5,0:1:3.01:0,3,37	./.	1/1:13,19:34:78.06:1306,78,0	1/1:15,0:15:28.20:313,28,0	1/1:11,0:8:12.04:175,12,0	1/1:24,0:17:5.95:42,6,0	1/1:21,0:21:55.05:1072,55,0	1/1:33,0:31:72.36:1001,72,0	1/1:11,0:11:28.89:377,29,0	1/1:11,0:12:15.39:140,15,0	1/1:18,0:17:19.18:178,19,0	1/1:16,0:16:8.20:532,8,0	1/1:13,0:12:27.54:335,28,0	1/1:5,9:15:15.05:220,15,0	1/1:15,0:14:28.49:338,28,0	1/1:18,0:17:44.36:712,44,0	1/1:5,0:3:6.02:89,6,0	1/1:22,0:21:57.29:699,57,0	1/1:5,0:5:9.03:168,9,0	1/1:13,0:13:18.53:269,19,0	0/1:14,0:14:9.01:257,0,9	1/1:10,0:8:16.87:223,17,0	1/1:17,0:15:45.09:643,45,0	1/1:23,0:22:54.61:936,55,0	1/1:23,0:22:46.68:632,47,0	1/1:3,9:11:9:171,9,0
chr10	59237325	.	C	CTCTT	2212.56	PASS	AB=0.585;AC=13;AF=0.232;AN=56;BaseQRankSum=-3.673;DP=569;FS=4.066;HRun=0;HaplotypeScore=122.2268;InbreedingCoeff=0.7915;MQ=56.56;MQ0=6;MQRankSum=0.578;QD=18.59;ReadPosRankSum=1.155;VQSLOD=3.4277;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:48.14:0,48,749	0/0:7,0:7:12.03:0,12,171	0/0:23,0:10:10.89:0,11,140	0/0:14,0:5:4.65:0,5,76	0/0:34,0:33:57.08:0,57,816	1/1:3,7:10:6.02:145,6,0	1/1:9,8:16:3.01:73,3,0	0/0:23,0:21:36.05:0,36,464	0/0:21,0:21:48.07:0,48,674	0/0:33,0:33:69.09:0,69,1015	0/0:28,0:28:63.19:0,63,972	1/1:2,9:11:12.04:291,12,0	1/1:5,18:23:24.04:523,24,0	0/0:21,0:21:48.06:0,48,686	0/0:14,0:13:36.02:0,36,482	0/0:12,0:12:14.68:0,15,219	0/0:23,0:23:60.15:0,60,893	0/0:23,0:21:39.09:0,39,603	0/0:17,0:16:23.97:0,24,356	0/0:32,0:32:84.26:0,84,1308	0/0:12,0:12:30.03:0,30,403	1/1:4,12:16:26.96:492,27,0	0/1:7,16:24:72.31:361,0,72	1/1:5,13:16:21.07:504,21,0	0/0:28,0:28:60.17:0,60,902	0/0:27,0:26:69.24:0,69,1112	0/0:25,0:23:54.14:0,54,830	0/0:7,0:7:15.05:0,15,243
chr10	59237839	.	CGTGTGTGTGTGTGT	C	1106.06	PASS	AB=0.925;AC=24;AF=0.480;AN=50;BaseQRankSum=0.593;DP=459;FS=4.557;HRun=0;HaplotypeScore=172.3409;InbreedingCoeff=0.0721;MQ=69.11;MQ0=17;MQRankSum=0.480;QD=4.39;ReadPosRankSum=0.160;VQSLOD=1.9248;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:12.04:0,12,403	1/1:4,1:5:3.01:39,3,0	0/0:30,0:20:3.01:0,3,41	0/0:30,0:12:3.01:0,3,42	0/0:19,0:18:24.07:0,24,606	0/1:14,0:15:78.89:98,0,79	0/0:15,0:15:4.13:0,4,40	1/1:23,0:25:3.98:49,4,0	0/0:24,0:23:21.06:0,21,579	1/1:15,0:15:3:28,3,0	./.	0/1:10,0:10:74.62:76,0,75	0/1:6,0:6:35.09:35,0,71	./.	0/1:6,0:9:1.57:61,0,2	0/0:11,0:11:9.03:0,9,317	0/1:10,0:11:51.32:51,0,134	0/0:20,0:18:18.06:0,18,623	0/1:11,2:12:6.97:106,0,7	./.	1/1:29,0:29:4.81:135,5,0	0/1:19,0:17:22.77:38,0,23	0/1:7,0:8:31.07:31,0,66	0/1:28,0:27:3.23:3,0,270	1/1:5,5:11:3.01:41,3,0	1/1:18,0:18:5.62:75,6,0	1/1:9,0:16:18.05:342,18,0	0/1:11,0:11:1.45:50,0,1
chr10	59237981	.	G	GGAGAGA	7467.08	PASS	AB=0.840;AC=53;AF=0.946;AN=56;BaseQRankSum=-2.361;DP=627;FS=0.000;HRun=0;HaplotypeScore=157.9793;InbreedingCoeff=-0.0206;MQ=49.62;MQ0=43;MQRankSum=-1.294;QD=11.91;ReadPosRankSum=1.106;VQSLOD=4.0757;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:18,1:23:14.89:336,15,0	1/1:10,0:15:14.55:300,15,0	1/1:48,0:13:1.25:3,1,0	0/1:74,0:22:14.04:16,0,14	1/1:12,0:14:11:145,11,0	1/1:6,5:15:3.01:93,3,0	1/1:12,6:21:6.96:75,7,0	1/1:28,0:25:29.99:389,30,0	1/1:15,3:27:35.97:725,36,0	1/1:17,1:27:37.90:807,38,0	1/1:16,0:16:4.68:54,5,0	1/1:10,1:13:9.03:214,9,0	1/1:6,0:9:6.02:136,6,0	1/1:11,0:13:12.04:261,12,0	1/1:22,0:21:13.53:186,14,0	1/1:16,6:24:24.03:549,24,0	1/1:13,0:16:11.61:146,12,0	0/1:7,0:9:12.23:115,0,12	1/1:17,0:13:17.09:278,17,0	1/1:14,0:18:15.05:353,15,0	1/1:14,0:13:5.70:131,6,0	1/1:14,3:17:9.03:229,9,0	0/1:15,7:24:31.31:202,0,31	1/1:13,5:23:5.31:76,5,0	1/1:8,0:11:14.86:317,15,0	1/1:20,0:30:38.57:705,39,0	1/1:21,0:21:26.55:474,27,0	1/1:9,0:6:10.53:153,11,0
chr10	59238199	.	GGA	G	488.42	PASS	AB=0.964;AC=18;AF=0.375;AN=48;BaseQRankSum=1.620;DP=573;FS=32.211;HRun=0;HaplotypeScore=98.8929;InbreedingCoeff=-0.0566;MQ=52.30;MQ0=32;MQRankSum=2.330;QD=1.71;ReadPosRankSum=-1.680;VQSLOD=0.0347;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:26:21:0,21,194	./.	./.	./.	0/1:16,1:15:15.73:16,0,82	1/1:18,0:18:1.63:25,2,0	0/0:20,0:21:15.91:0,16,178	0/0:28,0:27:1.36:0,1,3	1/1:20,0:20:11.90:95,12,0	0/0:16,0:17:12.02:0,12,136	0/0:12,0:12:2.99:0,3,24	0/1:18,0:17:23.14:23,0,61	0/0:11,0:11:6.01:0,6,71	0/1:13,1:13:38.97:39,0,68	0/0:15,0:16:11.96:0,12,117	0/0:21,0:22:3.63:0,4,171	1/1:22,1:22:11.78:129,12,0	0/1:8,1:10:8.05:96,0,8	0/1:19,0:17:11.51:12,0,85	0/0:18,0:17:0:0,0,0	0/1:28,0:27:19.84:20,0,60	0/1:22,0:23:34.07:67,0,34	1/1:14,1:15:3:32,3,0	0/1:29,1:27:28.10:28,0,262	0/0:16,0:15:2.35:0,2,42	0/1:24,0:21:46.11:46,0,85	0/1:26,0:26:3.62:4,0,137	./.
chr10	59241113	.	A	ATCTCT	3773.11	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-5.813;DP=634;FS=7.116;HRun=0;HaplotypeScore=130.6239;InbreedingCoeff=0.9460;MQ=80.91;MQ0=2;MQRankSum=-0.564;QD=27.74;ReadPosRankSum=-4.568;VQSLOD=1.7841;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:56.54:0,57,949	0/0:10,0:10:27.07:0,27,415	0/0:48,0:37:1.49:0,1,220	0/0:49,0:30:14.15:0,14,326	0/0:23,0:23:45.14:0,45,807	1/1:8,16:25:14.94:362,15,0	1/1:7,9:16:15.01:364,15,0	0/0:24,0:24:38.89:0,39,561	0/0:23,0:23:60.15:0,60,976	0/0:20,0:20:36.11:0,36,619	0/0:11,0:11:24.08:0,24,450	1/1:9,11:22:27.09:776,27,0	1/1:2,10:12:15.05:431,15,0	0/0:28,0:28:60.16:0,60,1001	0/0:20,0:20:45.12:0,45,734	0/0:30,0:30:69.20:0,69,1174	0/0:25,0:25:60.10:0,60,952	0/0:16,0:16:36.06:0,36,577	0/0:20,0:20:27.03:0,27,417	0/0:21,0:21:44.98:0,45,616	0/0:22,0:22:51.14:0,51,865	1/1:4,14:19:35.94:697,36,0	1/1:3,13:16:20.99:534,21,0	1/1:6,20:26:22.89:609,23,0	0/0:20,0:20:27.08:0,27,448	0/0:19,0:19:27.08:0,27,435	0/0:26,0:26:57.16:0,57,968	0/0:10,0:10:23.10:0,23,360
chr10	59241178	.	CCTCT	C	1128.84	PASS	AB=0.910;AC=23;AF=0.442;AN=52;BaseQRankSum=-2.835;DP=556;FS=5.878;HRun=0;HaplotypeScore=121.7774;InbreedingCoeff=0.4395;MQ=51.03;MQ0=21;MQRankSum=3.784;QD=4.34;ReadPosRankSum=2.273;VQSLOD=1.8134;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:24:5.84:20,0,6	0/0:9,0:8:8.99:0,9,115	0/0:36,0:11:2.92:0,3,17	./.	0/1:17,0:22:22.47:22,0,26	0/0:26,0:25:40.18:0,40,497	0/0:13,0:13:6.02:0,6,94	0/0:37,0:36:49.54:0,50,403	1/1:10,0:9:0.32:1,0,0	1/1:20,0:20:1.03:79,1,0	1/1:9,8:17:3.48:49,3,0	0/0:21,0:20:9.01:0,9,107	0/0:13,0:13:14.40:0,14,160	1/1:11,11:21:9.03:144,9,0	1/1:16,1:19:25.32:247,25,0	0/1:18,0:17:14.66:53,0,15	0/0:22,0:20:21.77:0,22,191	1/1:16,0:13:9.25:43,9,0	./.	1/1:6,0:6:2.96:48,3,0	1/1:18,9:26:11.72:129,12,0	0/0:22,0:22:13.56:0,14,143	0/0:14,0:14:9.49:0,9,113	0/0:26,0:26:39.12:0,39,631	0/1:14,7:22:3.54:87,0,4	1/1:9,11:20:16.42:257,16,0	0/1:14,0:13:5:120,0,5	0/0:4,0:4:1.25:0,1,3
chr10	59241500	.	C	CTTGT	31654.77	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=0.916;DP=684;FS=1.688;HRun=0;HaplotypeScore=134.5543;InbreedingCoeff=0.9824;MQ=93.07;MQ0=0;MQRankSum=-12.472;QD=51.47;ReadPosRankSum=4.956;VQSLOD=5.5095;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,42:46:99:2119,102,0	1/1:0,13:13:29.99:676,30,0	0/0:32,0:33:79.76:0,80,1298	0/0:36,0:36:87.31:0,87,1554	1/1:1,18:22:41.88:778,42,0	1/1:1,24:27:59.96:1352,60,0	1/1:4,25:30:62.81:1167,63,0	1/1:3,23:27:69.15:1479,69,0	1/1:3,22:26:66.18:1697,66,0	1/1:4,14:24:57.14:1177,57,0	1/1:3,12:15:26.90:534,27,0	1/1:2,24:26:65.98:1511,66,0	1/1:0,18:20:51.18:1358,51,0	1/1:0,16:19:39.07:977,39,0	1/1:1,30:31:84.12:2016,84,0	1/1:2,18:20:45.15:1200,45,0	1/1:0,28:31:78.24:2021,78,0	1/1:1,13:15:29.99:675,30,0	1/1:4,12:22:60.14:1341,60,0	1/1:2,17:19:44.68:764,45,0	1/1:3,30:36:66.28:1276,66,0	1/1:2,16:19:38.93:772,39,0	1/1:0,13:13:24.88:579,25,0	1/1:1,29:31:66.23:1759,66,0	1/1:2,22:25:56.93:1274,57,0	1/1:2,18:20:51.17:1322,51,0	1/1:5,20:29:57.20:1517,57,0	1/1:2,3:6:12.04:314,12,0
chr10	59241928	.	AT	A	4113.88	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=1.300;DP=640;FS=0.000;HRun=5;HaplotypeScore=77.5657;InbreedingCoeff=0.9961;MQ=85.08;MQ0=0;MQRankSum=-5.499;QD=29.60;ReadPosRankSum=2.697;VQSLOD=4.1677;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,44:46:99:1360,120,0	0/0:10,0:10:30.10:0,30,410	0/0:18,0:18:51.16:0,51,682	0/0:23,0:23:63.20:0,63,844	1/1:2,22:24:63.18:713,63,0	0/0:24,0:23:66.21:0,66,889	0/0:27,0:27:81.27:0,81,1105	0/0:32,0:32:90.28:0,90,1203	1/1:0,24:24:66.19:748,66,0	0/0:31,0:30:81.26:0,81,1095	0/0:13,0:13:39.12:0,39,519	0/0:28,0:28:81.27:0,81,1105	0/0:15,0:15:42.12:0,42,557	0/0:26,0:26:78.23:0,78,1034	0/0:21,0:21:63.21:0,63,862	1/1:2,26:28:72.21:817,72,0	0/0:18,0:18:54.15:0,54,716	1/1:2,15:17:42.12:476,42,0	0/0:19,0:19:45.15:0,45,614	0/0:24,0:24:66.22:0,66,902	0/0:27,0:27:69.23:0,69,944	0/0:26,0:26:78.25:0,78,1053	0/0:13,0:13:39.13:0,39,533	0/0:31,0:31:87.29:0,87,1188	0/0:19,0:19:48.16:0,48,656	0/0:27,0:27:72.23:0,72,972	0/0:24,0:24:72.24:0,72,984	0/0:5,0:5:15.05:0,15,205
chr10	59242286	.	CT	C	3787.18	PASS	AB=0.690;AC=51;AF=0.911;AN=56;BaseQRankSum=-1.607;DP=386;FS=17.279;HRun=14;HaplotypeScore=46.2266;InbreedingCoeff=0.5495;MQ=73.40;MQ0=5;MQRankSum=-1.438;QD=10.40;ReadPosRankSum=3.244;VQSLOD=1.2517;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:11,9:19:0.80:120,0,1	1/1:3,4:7:8.83:62,9,0	0/0:13,0:8:2.50:0,2,9	0/0:8,0:8:8.88:0,9,64	1/1:7,10:17:23.71:164,24,0	1/1:3,0:19:30.54:88,31,0	1/1:0,0:5:6.10:18,6,0	1/1:9,11:20:34.61:228,35,0	1/1:5,8:13:20.73:144,21,0	1/1:0,14:14:35.45:238,35,0	1/1:3,8:12:19.85:129,20,0	1/1:5,0:11:8.12:23,8,0	1/1:2,0:10:14.24:41,14,0	1/1:5,4:8:11.85:82,12,0	1/1:4,10:14:17.70:123,18,0	1/1:4,8:12:14.87:103,15,0	1/1:3,18:21:53.52:370,54,0	1/1:3,26:29:56.01:390,56,0	1/1:7,10:16:26.63:183,27,0	1/1:2,14:18:17.83:251,18,0	1/1:1,7:8:17.84:123,18,0	1/1:1,0:3:4.07:12,4,0	1/1:1,0:4:2.02:6,2,0	1/1:4,0:12:16.28:47,16,0	1/1:4,13:17:26.04:184,26,0	1/1:8,14:20:38.62:267,39,0	1/1:4,17:20:25.38:268,25,0	1/1:1,6:7:17.85:123,18,0
chr10	59244307	.	C	CT	4115.25	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-10.547;DP=645;FS=0.369;HRun=9;HaplotypeScore=78.3503;InbreedingCoeff=0.9908;MQ=73.01;MQ0=0;MQRankSum=0.461;QD=25.56;ReadPosRankSum=0.378;VQSLOD=3.9826;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:44:69.23:0,69,203	0/0:6,0:6:18:0,18,156	0/0:16,0:16:32.71:0,33,268	0/0:12,0:12:24.41:0,24,182	0/0:1,0:28:46.85:0,47,138	1/1:2,24:25:64.42:700,64,0	1/1:4,27:31:69.18:759,69,0	0/0:33,0:32:71.92:0,72,621	0/0:2,0:19:28.52:0,29,84	0/0:25,0:25:56.98:0,57,495	0/0:17,0:17:50.97:0,51,439	1/1:2,15:16:36.10:398,36,0	1/1:1,6:6:12.03:132,12,0	0/0:22,0:19:50.91:0,51,431	0/0:23,0:23:62.96:0,63,543	0/0:0,0:22:42.78:0,43,126	0/0:40,0:38:92.75:0,93,802	0/0:2,0:28:39.95:0,40,118	0/0:22,0:21:42.82:0,43,474	0/0:22,1:23:26.76:0,27,454	0/0:23,0:23:53.96:0,54,469	1/1:2,16:19:18.91:419,19,0	1/1:1,19:20:54.01:579,54,0	1/1:2,39:41:99:1128,102,0	0/0:19,0:19:53.97:0,54,465	0/0:26,0:24:59.94:0,60,516	0/0:14,0:13:32.97:0,33,280	0/0:18,0:17:44.98:0,45,391
chr10	59244504	.	T	TTC	16282.87	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-7.299;DP=523;FS=0.000;HRun=0;HaplotypeScore=54.5656;InbreedingCoeff=0.9739;MQ=64.84;MQ0=12;MQRankSum=-5.153;QD=34.79;ReadPosRankSum=5.419;VQSLOD=6.7743;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,25:25:60.21:1063,60,0	1/1:0,7:7:21.07:372,21,0	0/0:21,0:21:51.17:0,51,691	0/0:34,0:32:70.21:0,70,938	1/1:3,24:21:60.21:1064,60,0	1/1:0,15:10:30.10:531,30,0	1/1:0,22:19:48.16:851,48,0	1/1:4,10:8:21.06:345,21,0	1/1:0,14:7:18.06:319,18,0	1/1:0,28:21:59.99:1002,60,0	1/1:2,13:13:24.08:426,24,0	1/1:2,10:9:18.06:319,18,0	1/1:3,8:9:18.06:305,18,0	1/1:2,14:12:33.11:585,33,0	1/1:0,19:18:48.16:851,48,0	1/1:1,9:9:21.07:373,21,0	1/1:1,25:21:63.22:1117,63,0	1/1:2,14:13:33.11:585,33,0	1/1:3,12:14:24.04:384,24,0	1/1:4,23:18:45.15:795,45,0	1/1:3,21:21:54.19:958,54,0	1/1:4,14:13:33.11:585,33,0	1/1:2,16:13:30.10:532,30,0	1/1:1,25:23:60.20:1010,60,0	1/1:3,15:12:30.10:532,30,0	1/1:2,14:11:30.10:532,30,0	1/1:2,12:11:30.10:526,30,0	1/1:0,7:6:18.06:319,18,0
chr10	59244576	.	CT	C	759.46	PASS	AB=0.802;AC=22;AF=0.393;AN=56;BaseQRankSum=-5.068;DP=491;FS=9.090;HRun=17;HaplotypeScore=95.2259;InbreedingCoeff=0.1411;MQ=71.33;MQ0=24;MQRankSum=4.660;QD=2.75;ReadPosRankSum=4.431;VQSLOD=-0.6488;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:29:48.90:0,49,262	0/0:5,0:5:0.47:0,0,1	0/0:23,0:14:0.52:0,1,26	0/0:26,0:22:13.24:0,13,68	0/0:20,0:22:24.13:0,24,127	0/1:8,3:11:27.66:52,0,28	0/1:13,4:16:27.37:62,0,27	0/0:20,0:13:11.77:0,12,74	0/0:7,0:7:11.42:0,11,60	0/1:10,7:17:0.63:92,0,1	0/1:13,5:15:11.16:37,0,11	0/1:8,3:11:5.23:54,0,5	0/1:10,3:12:11.64:43,0,12	1/1:12,1:13:11.41:57,11,0	1/1:14,3:17:12.54:69,13,0	0/0:17,0:17:32.80:0,33,182	0/0:21,0:19:21.84:0,22,129	0/0:13,0:13:19.97:0,20,111	1/1:11,4:13:4.03:19,4,0	0/1:13,3:16:23.89:39,0,24	1/1:18,3:20:18.25:101,18,0	0/0:14,0:13:11.83:0,12,82	0/1:17,2:21:21.24:21,0,47	0/1:19,4:23:11.23:56,0,11	1/1:8,3:12:12.88:70,13,0	0/1:19,3:20:3.67:80,0,4	0/1:13,3:17:2.49:68,0,2	0/1:4,1:2:10.77:11,0,18
chr10	59244973	.	CTTTCTTTTTTTTTTTTCT	C	3848.70	PASS	AB=0.994;AC=24;AF=0.429;AN=56;BaseQRankSum=-8.325;DP=374;FS=29.059;HRun=0;HaplotypeScore=185.0468;InbreedingCoeff=0.0787;MQ=66.65;MQ0=11;MQRankSum=3.289;QD=16.73;ReadPosRankSum=1.560;VQSLOD=1.2180;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:58.96:0,59,1491	0/1:8,0:7:24:24,0,211	0/0:23,0:14:23.53:0,24,343	0/0:22,0:11:26.23:0,26,368	0/0:13,0:12:22.20:0,22,487	1/1:8,3:11:30.03:745,30,0	1/1:16,0:16:35.82:502,36,0	0/1:16,0:13:60.67:61,0,117	0/0:10,0:10:30:0,30,693	0/0:11,0:10:3.40:0,3,642	0/0:11,0:11:26.16:0,26,559	1/1:17,1:18:40.20:602,40,0	1/1:10,0:10:7.88:175,8,0	0/1:12,0:10:39.22:39,0,447	0/1:16,0:15:20.54:21,0,826	0/0:10,0:10:24.07:0,24,892	0/1:22,0:18:31.02:31,0,708	0/0:9,0:8:17.78:0,18,228	0/1:19,0:19:26.47:26,0,783	0/1:8,0:8:84.18:84,0,89	0/1:3,0:3:20.80:21,0,37	1/1:8,2:10:29.88:487,30,0	0/1:11,1:12:5.46:445,0,5	1/1:15,3:18:25.77:438,26,0	0/0:11,0:9:0.07:0,0,690	0/1:14,0:14:22.39:22,0,502	0/1:8,0:6:41.28:44,0,41	0/1:9,0:8:81.49:81,0,212
chr10	59244976	.	TC	T	4281.30	PASS	AB=1.000;AC=43;AF=0.768;AN=56;BaseQRankSum=-3.940;DP=391;FS=16.231;HRun=1;HaplotypeScore=91.6160;InbreedingCoeff=0.8007;MQ=58.46;MQ0=16;MQRankSum=-0.385;QD=14.71;ReadPosRankSum=-0.082;VQSLOD=3.2095;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:40.37:0,40,275	1/1:6,2:7:17.92:143,18,0	0/0:22,0:12:14.50:0,14,187	0/0:21,1:9:18.98:0,19,164	0/0:12,0:11:8.33:0,8,37	1/1:10,0:10:29.86:236,30,0	1/1:12,4:15:35.84:331,36,0	1/1:18,2:17:23.16:170,23,0	0/0:11,0:11:24:0,24,161	1/1:14,0:12:27.35:230,27,0	1/1:12,1:13:0.52:68,1,0	1/1:11,4:15:41.91:381,42,0	1/1:8,2:9:25.74:211,26,0	1/1:13,0:10:22.21:190,22,0	1/1:16,1:16:31.57:246,32,0	0/0:9,0:8:22.57:0,23,162	1/1:22,3:22:37.22:294,37,0	0/1:11,0:9:14.70:15,0,64	1/1:18,0:18:38.84:225,39,0	1/1:10,0:10:25.15:198,25,0	1/1:3,0:3:5.93:43,6,0	1/1:10,0:10:29.31:230,29,0	1/1:12,1:12:32.90:291,33,0	1/1:15,3:17:23.93:222,24,0	1/1:9,3:10:9.64:169,10,0	1/1:14,1:15:27:193,27,0	1/1:9,1:8:11.96:88,12,0	1/1:8,1:7:13.61:106,14,0
chr10	59244984	.	TTTTTTC	T	2780.55	PASS	AB=1.000;AC=34;AF=0.607;AN=56;BaseQRankSum=-1.396;DP=465;FS=31.006;HRun=0;HaplotypeScore=123.8025;InbreedingCoeff=-0.1679;MQ=43.37;MQ0=43;MQRankSum=1.412;QD=6.64;ReadPosRankSum=1.017;VQSLOD=0.9845;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:33,1:32:62.25:511,62,0	1/1:10,0:6:11.99:141,12,0	0/1:20,0:10:23.12:40,0,23	0/0:19,0:4:11.29:0,11,100	1/1:13,1:13:27.47:245,27,0	1/1:8,0:8:11.31:156,11,0	0/1:12,0:11:3.24:30,0,3	0/1:23,0:20:10.42:86,0,10	1/1:15,0:14:16.61:216,17,0	0/0:23,0:18:3.78:0,4,181	0/1:19,0:18:68.63:69,0,115	0/1:12,0:11:14.50:56,0,15	0/1:8,0:7:7.55:8,0,18	0/1:16,0:12:38.10:50,0,38	0/1:21,0:17:83.55:111,0,84	0/1:11,0:9:4.85:123,0,5	1/1:26,2:24:25.06:385,25,0	1/1:17,0:12:10.43:123,10,0	0/1:25,0:22:80.81:81,0,163	0/1:14,0:13:51.09:55,0,51	0/0:4,0:4:8.62:0,9,46	1/1:9,0:9:11.76:122,12,0	0/1:11,0:10:1.04:22,0,1	1/1:17,0:13:14.20:98,14,0	0/1:11,0:10:61.34:72,0,61	0/1:25,0:24:99:101,0,113	0/1:14,0:12:6.45:6,0,68	0/1:25,0:17:40.56:41,0,71
chr10	59244985	.	TTTTTC	T	3623.92	PASS	AB=1.000;AC=39;AF=0.696;AN=56;BaseQRankSum=-1.440;DP=465;FS=19.801;HRun=0;HaplotypeScore=112.9358;InbreedingCoeff=-0.1763;MQ=41.39;MQ0=46;MQRankSum=1.895;QD=8.22;ReadPosRankSum=0.123;VQSLOD=1.3020;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:33,3:34:73.81:654,74,0	1/1:9,1:6:11.52:148,12,0	0/1:19,0:9:13.85:40,0,14	0/0:19,0:4:10.54:0,11,76	1/1:13,1:13:28.66:290,29,0	1/1:8,0:8:11.66:136,12,0	1/1:12,0:11:12.95:65,13,0	1/1:22,1:20:9.15:124,9,0	1/1:15,0:14:30.41:271,30,0	0/1:23,0:18:36.61:37,0,62	0/1:19,0:18:59:89,0,59	1/1:11,0:10:13.45:88,13,0	0/1:8,0:7:3.82:27,0,4	0/1:16,0:12:20.60:80,0,21	0/1:21,0:17:40.42:136,0,40	0/1:11,0:9:11.62:156,0,12	1/1:28,0:24:25.08:400,25,0	1/1:15,1:12:10.03:127,10,0	0/1:27,0:23:50.98:115,0,51	0/1:14,0:13:31.22:58,0,31	0/0:5,0:4:0.89:0,1,2	1/1:8,0:8:10.50:100,10,0	1/1:12,0:10:8.86:38,9,0	1/1:17,0:13:17.22:106,17,0	0/1:11,0:10:13.12:98,0,13	0/1:25,0:24:35.52:175,0,36	0/1:14,0:12:19.04:19,0,24	0/1:22,0:14:27.49:50,0,27
chr10	59244986	.	TTTTC	T	4325.50	PASS	AB=1.000;AC=52;AF=0.929;AN=56;BaseQRankSum=-1.735;DP=474;FS=7.081;HRun=0;HaplotypeScore=106.8789;InbreedingCoeff=0.3629;MQ=40.74;MQ0=46;MQRankSum=-0.945;QD=9.51;ReadPosRankSum=-2.985;VQSLOD=2.1268;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:37,1:36:93.85:734,94,0	1/1:9,1:6:13.54:133,14,0	0/1:19,0:9:26.36:40,0,26	0/0:19,0:4:9.59:0,10,65	1/1:14,0:13:31.09:262,31,0	1/1:11,0:11:15.06:123,15,0	1/1:14,0:13:18.69:84,19,0	1/1:23,0:20:31.52:170,32,0	1/1:14,1:14:38.94:302,39,0	1/1:23,0:18:14.99:105,15,0	1/1:19,0:18:18.44:117,18,0	1/1:10,0:9:13.73:83,14,0	1/1:10,0:8:0.88:42,1,0	1/1:16,0:12:8.81:112,9,0	1/1:21,0:17:18.04:175,18,0	1/1:10,1:9:2.33:204,2,0	1/1:27,1:24:43.14:473,43,0	1/1:17,0:12:17.39:116,17,0	1/1:26,0:22:25.46:164,25,0	1/1:13,0:12:9.36:77,9,0	0/1:5,0:4:0:0,0,0	1/1:11,0:8:12.24:97,12,0	1/1:13,0:11:9.11:39,9,0	1/1:17,0:13:18.52:103,19,0	1/1:10,1:10:17.06:171,17,0	1/1:24,0:23:37.06:274,37,0	1/1:14,0:12:8.72:47,9,0	1/1:22,0:14:4.88:77,5,0
chr10	59244987	.	T	TGG	939.69	PASS	AB=0.856;AC=10;AF=0.179;AN=56;BaseQRankSum=0.626;DP=473;FS=5.208;HRun=0;HaplotypeScore=120.3593;InbreedingCoeff=0.4790;MQ=40.17;MQ0=46;MQRankSum=-0.914;QD=10.80;ReadPosRankSum=4.578;VQSLOD=3.2594;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:36:92:0,92,933	0/0:9,0:6:14.95:0,15,160	0/0:18,0:8:20.81:0,21,218	0/0:19,0:4:10.58:0,11,121	0/0:15,0:14:25.09:0,25,226	1/1:8,2:10:2.25:124,2,0	0/1:11,2:12:5.22:218,0,5	0/0:22,0:19:42.11:0,42,522	0/0:14,0:14:38.97:0,39,418	0/0:23,0:18:51.14:0,51,660	0/0:19,0:18:46.32:0,46,551	0/1:8,2:9:14.25:160,0,14	0/1:11,1:10:25.18:25,0,92	0/0:16,0:12:33:0,33,342	0/0:22,0:18:48.02:0,48,534	0/0:10,0:9:26.92:0,27,270	0/0:26,0:24:66.02:0,66,744	0/0:17,0:12:23.95:0,24,237	0/0:26,0:22:63.14:0,63,803	0/0:13,0:12:32.73:0,33,386	0/0:5,0:4:9.03:0,9,113	1/1:8,2:7:14.05:155,14,0	0/1:9,3:10:11.53:228,0,12	1/1:15,5:16:19.60:181,20,0	0/0:11,0:10:27.05:0,27,341	0/0:22,0:22:63.16:0,63,795	0/0:13,0:11:30.96:0,31,366	0/0:21,0:14:33.09:0,33,421
chr10	59244988	.	TTC	T	5019	PASS	AB=1.000;AC=53;AF=0.946;AN=56;BaseQRankSum=-2.294;DP=466;FS=13.577;HRun=0;HaplotypeScore=89.6116;InbreedingCoeff=0.3840;MQ=39.97;MQ0=46;MQRankSum=-0.827;QD=11.23;ReadPosRankSum=-3.034;VQSLOD=2.9457;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:38,0:36:94.18:699,94,0	1/1:10,0:6:14.95:126,15,0	0/1:18,0:8:33.12:40,0,33	0/0:19,0:4:8.74:0,9,50	1/1:15,0:14:33.47:260,33,0	1/1:10,0:10:15.80:85,16,0	1/1:14,0:13:18.74:84,19,0	1/1:19,1:18:38.37:274,38,0	1/1:15,0:14:40.69:286,41,0	1/1:23,0:18:36.51:258,37,0	1/1:19,0:18:21.90:158,22,0	1/1:10,0:9:13.68:70,14,0	1/1:12,0:10:3.84:62,4,0	1/1:15,0:11:26.83:191,27,0	1/1:21,1:18:43.36:323,43,0	1/1:11,0:9:0.83:147,1,0	1/1:26,2:24:47.42:452,47,0	1/1:17,0:12:17.07:135,17,0	1/1:25,0:21:41.72:248,42,0	1/1:13,0:12:24.36:172,24,0	1/1:5,0:4:4.93:13,5,0	1/1:9,0:6:12.94:78,13,0	1/1:11,0:9:12.02:44,12,0	1/1:20,0:16:21.39:109,21,0	1/1:9,2:10:15.50:178,15,0	1/1:22,0:21:44.97:292,45,0	1/1:12,0:10:20.77:102,21,0	1/1:22,0:14:13.60:131,14,0
chr10	59244989	.	TC	T	5441.37	PASS	AB=0.895;AC=53;AF=0.946;AN=56;BaseQRankSum=-2.031;DP=464;FS=1.445;HRun=1;HaplotypeScore=80.7544;InbreedingCoeff=0.4764;MQ=37.95;MQ0=48;MQRankSum=-1.244;QD=12.23;ReadPosRankSum=0.260;VQSLOD=3.2132;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:37,0:35:94.36:694,94,0	1/1:10,0:6:14.92:114,15,0	0/1:15,2:7:24.60:40,0,25	0/0:19,0:4:9.70:0,10,53	1/1:14,1:14:33.41:243,33,0	1/1:10,0:10:15.25:65,15,0	1/1:14,0:13:18.70:85,19,0	1/1:19,1:18:40.87:283,41,0	1/1:15,0:14:40.42:277,40,0	1/1:23,0:18:45.29:327,45,0	1/1:19,0:18:38.38:231,38,0	1/1:10,0:9:13.50:64,13,0	1/1:11,0:9:3.88:62,4,0	1/1:15,0:11:27.99:197,28,0	1/1:22,0:18:47.04:328,47,0	1/1:12,0:9:22.88:157,23,0	1/1:27,2:24:62.78:434,63,0	1/1:17,0:12:24.33:154,24,0	1/1:24,0:20:54.23:355,54,0	1/1:13,0:12:28.82:187,29,0	1/1:5,0:4:8.86:57,9,0	1/1:9,0:6:12.47:60,12,0	1/1:11,0:9:13.70:58,14,0	1/1:19,1:16:21.04:103,21,0	1/1:11,0:10:25.13:197,25,0	1/1:23,0:21:55.34:350,55,0	1/1:11,0:9:23.48:131,23,0	1/1:22,0:14:29.16:189,29,0
chr10	59245018	.	TC	T	5946.88	PASS	AC=40;AF=0.800;AN=50;BaseQRankSum=1.304;DP=335;FS=0.614;HRun=1;HaplotypeScore=50.7734;InbreedingCoeff=0.9089;MQ=36.11;MQ0=40;MQRankSum=-2.233;QD=23.98;ReadPosRankSum=1.460;VQSLOD=4.7949;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:21:50.91:0,51,650	1/1:3,7:7:8.99:102,9,0	./.	./.	0/0:19,0:17:29.70:0,30,303	1/1:1,15:16:30.10:405,30,0	1/1:3,13:13:30.05:386,30,0	1/1:1,12:12:32.98:386,33,0	0/0:16,0:15:42.12:0,42,580	1/1:1,11:11:33.10:438,33,0	1/1:0,5:5:15.05:205,15,0	1/1:2,9:10:14.82:204,15,0	1/1:1,7:7:18.06:241,18,0	1/1:0,8:8:15.01:184,15,0	1/1:4,5:5:9.03:122,9,0	0/0:4,0:2:6.01:0,6,60	1/1:5,10:10:21.07:287,21,0	0/0:11,0:5:12.04:0,12,169	1/1:3,13:13:39.03:490,39,0	1/1:1,12:12:26.61:295,27,0	./.	1/1:2,13:12:33.02:400,33,0	1/1:4,11:13:21.02:252,21,0	1/1:7,12:15:27:323,27,0	1/1:0,5:5:12.04:164,12,0	1/1:2,16:16:48.12:611,48,0	1/1:0,11:11:21.07:287,21,0	1/1:5,8:8:12.04:165,12,0
chr10	59245440	.	GGTGTGTGTGTGTGT	G	1189.42	PASS	AB=0.962;AC=23;AF=0.500;AN=46;BaseQRankSum=1.179;DP=507;FS=4.650;HRun=0;HaplotypeScore=175.2250;InbreedingCoeff=0.4534;MQ=64.10;MQ0=18;MQRankSum=-1.299;QD=5.04;ReadPosRankSum=0.023;VQSLOD=2.6737;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:21:24.08:0,24,541	0/0:1,0:2:6:0,6,85	./.	./.	0/0:16,0:15:9.03:0,9,180	1/1:22,2:22:8.82:271,9,0	0/1:16,1:17:77.61:78,0,141	0/0:28,0:28:8.49:0,8,79	0/0:15,0:15:6.02:0,6,210	0/1:14,0:14:0:0,0,0	0/1:15,0:14:0:0,0,0	1/1:14,0:12:3.01:65,3,0	0/1:11,1:13:11.89:165,0,12	./.	1/1:13,0:14:3.01:98,3,0	0/0:11,0:11:9.50:0,10,440	0/0:30,0:31:29.81:0,30,467	0/0:16,0:15:16.30:0,16,370	0/0:17,0:16:0:0,0,0	./.	./.	1/1:19,4:23:3.01:116,3,0	1/1:18,1:17:6.02:127,6,0	1/1:25,0:23:12.02:143,12,0	0/1:13,0:13:0:0,0,0	1/1:23,0:23:2.49:9,2,0	1/1:14,0:14:6.02:164,6,0	1/1:5,0:5:3.01:98,3,0
chr10	59245552	.	CT	C	10866.08	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=-9.653;DP=517;FS=0.765;HRun=6;HaplotypeScore=63.7622;InbreedingCoeff=0.9981;MQ=91.00;MQ0=0;MQRankSum=-0.534;QD=29.69;ReadPosRankSum=0.552;VQSLOD=5.4257;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:25:72.23:0,72,946	1/1:1,8:9:18.04:193,18,0	0/0:20,0:20:48.03:0,48,546	0/0:24,0:24:48.14:0,48,582	0/0:24,0:24:69.21:0,69,894	1/1:0,13:13:36.09:387,36,0	1/1:0,28:28:72.18:774,72,0	1/1:2,20:22:60.13:636,60,0	0/0:19,0:19:57.19:0,57,750	1/1:0,17:17:51.11:540,51,0	1/1:0,10:10:27.07:290,27,0	1/1:0,14:14:39.10:419,39,0	1/1:0,12:12:36.09:387,36,0	1/1:1,13:14:39.10:419,39,0	1/1:0,18:18:54.14:580,54,0	0/0:17,0:17:51.17:0,51,671	1/1:2,24:26:72.18:774,72,0	0/0:21,0:21:60.20:0,60,789	1/1:3,19:22:57.10:600,57,0	1/1:0,26:26:75.19:806,75,0	1/1:0,16:16:45.11:484,45,0	1/1:0,15:15:45.11:484,45,0	1/1:3,16:19:51.13:547,51,0	1/1:1,18:19:51.13:548,51,0	1/1:0,12:12:36.09:387,36,0	1/1:1,19:20:57.14:613,57,0	1/1:1,23:24:63.16:677,63,0	1/1:0,10:10:30.08:322,30,0
chr10	59246093	.	G	GTTGTTTTGTT	3186.85	PASS	AB=1.000;AC=20;AF=0.357;AN=56;BaseQRankSum=-9.634;DP=436;FS=0.000;HRun=0;HaplotypeScore=127.2264;InbreedingCoeff=0.1600;MQ=63.61;MQ0=2;MQRankSum=-4.140;QD=14.69;ReadPosRankSum=-0.278;VQSLOD=2.4824;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:10,14:26:24.08:1042,24,0	0/1:7,0:7:6.94:7,0,317	0/0:18,0:11:17.63:0,18,363	0/0:33,0:22:35.64:0,36,479	1/1:4,12:18:21.07:954,21,0	0/0:14,0:14:24.01:0,24,497	0/0:25,0:25:45.66:0,46,957	0/1:30,0:29:75.29:75,0,414	1/1:2,3:7:3.01:151,3,0	0/0:16,0:16:1.66:0,2,614	0/0:5,0:5:12.04:0,12,293	0/0:15,0:15:19.82:0,20,668	0/1:12,0:12:22.91:23,0,448	0/0:7,0:7:15.05:0,15,338	0/0:4,0:4:2.97:0,3,20	1/1:1,3:4:6.02:302,6,0	0/1:28,0:27:21.37:21,0,967	1/1:13,8:25:14.98:623,15,0	0/1:17,0:16:66.90:67,0,298	0/1:16,0:16:1.14:1,0,451	0/0:22,0:22:30.92:0,31,995	0/0:12,0:12:18.04:0,18,359	0/1:9,0:9:8.71:9,0,337	0/0:25,0:25:57.09:0,57,1151	0/1:6,0:6:13:13,0,156	0/0:21,0:21:16.76:0,17,710	0/1:7,0:7:35.05:35,0,204	0/1:4,0:4:37.96:38,0,121
chr10	59246219	.	A	AT	2142.47	PASS	AB=0.712;AC=37;AF=0.685;AN=54;BaseQRankSum=-0.985;DP=265;FS=4.577;HRun=9;HaplotypeScore=56.5445;InbreedingCoeff=0.4384;MQ=58.07;MQ0=15;MQRankSum=-2.400;QD=14.10;ReadPosRankSum=2.870;VQSLOD=3.6384;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:14:10.62:0,11,144	1/1:2,0:2:2.92:17,3,0	0/0:38,0:11:19.68:0,20,138	0/0:27,0:10:3.09:0,3,78	0/0:11,0:11:26.49:0,26,197	1/1:4,0:3:2.90:16,3,0	1/1:1,3:4:9.02:100,9,0	1/1:10,11:19:37.02:386,37,0	0/0:2,0:2:2.74:0,3,12	1/1:3,4:7:11.59:124,12,0	1/1:1,3:4:9.02:99,9,0	1/1:3,0:3:5.81:31,6,0	1/1:6,0:6:8.40:41,8,0	1/1:1,2:2:3.01:33,3,0	0/1:3,4:7:9.02:117,0,9	0/0:3,0:3:7.96:0,8,45	1/1:11,6:16:23.63:237,24,0	0/0:13,0:12:8.35:0,8,142	1/1:10,6:14:1.10:179,1,0	1/1:7,2:7:15.04:166,15,0	1/1:2,1:3:3.01:33,3,0	./.	1/1:2,1:3:3.48:34,3,0	0/1:2,1:3:16.67:57,0,17	1/1:2,3:5:15.04:163,15,0	1/1:5,6:9:7.12:209,7,0	1/1:3,2:5:9.01:90,9,0	0/1:12,5:18:13.67:181,0,14
chr10	59246224	.	T	TTTTTTATTTTA	5388.05	PASS	AB=0.959;AC=43;AF=0.796;AN=54;BaseQRankSum=-2.158;DP=281;FS=0.723;HRun=0;HaplotypeScore=96.8522;InbreedingCoeff=0.1293;MQ=57.54;MQ0=23;MQRankSum=-2.327;QD=22.54;ReadPosRankSum=1.696;VQSLOD=3.7663;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:14,0:13:41.45:41,0,72	1/1:0,0:1:3.01:46,3,0	0/0:40,0:11:20.66:0,21,226	0/1:31,0:10:8.85:9,0,142	0/1:12,0:11:4.47:4,0,117	1/1:0,9:9:3.01:165,3,0	1/1:6,0:5:9.03:261,9,0	1/1:22,0:19:31.27:429,31,0	0/0:2,0:2:0.47:0,0,1	1/1:8,0:8:20.99:443,21,0	1/1:5,0:5:12.04:267,12,0	1/1:1,3:4:6.02:330,6,0	0/1:3,2:5:12.50:322,0,12	1/1:3,0:2:3.01:33,3,0	1/1:8,0:8:10.56:250,11,0	0/1:3,0:3:0.79:1,0,20	1/1:12,0:14:24.87:307,25,0	0/1:14,0:12:42.17:42,0,100	1/1:16,0:13:19.86:517,20,0	1/1:8,0:6:15.04:166,15,0	1/1:2,0:2:3.01:66,3,0	./.	1/1:3,0:3:3.48:34,3,0	0/1:4,0:4:6.97:79,0,7	1/1:6,0:6:15.05:357,15,0	1/1:14,0:12:27.02:499,27,0	1/1:4,0:4:9.01:172,9,0	1/1:18,0:18:26.85:547,27,0
chr10	59246234	.	A	AT	2492.14	PASS	AB=0.783;AC=37;AF=0.712;AN=52;BaseQRankSum=-0.128;DP=271;FS=1.684;HRun=4;HaplotypeScore=58.9220;InbreedingCoeff=0.2854;MQ=46.10;MQ0=31;MQRankSum=-1.840;QD=13.05;ReadPosRankSum=2.126;VQSLOD=1.8019;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:11,5:12:53.40:110,0,53	1/1:2,0:2:2.96:19,3,0	0/0:37,0:9:3.54:0,4,45	0/0:28,0:7:16.61:0,17,129	1/1:10,2:11:4.20:103,4,0	1/1:11,0:10:2.50:9,2,0	1/1:4,1:4:6.02:71,6,0	0/1:17,7:21:99:242,0,160	1/1:1,1:2:3.01:42,3,0	1/1:3,6:9:26.96:267,27,0	1/1:5,1:6:7.26:68,7,0	0/0:4,0:4:3.59:0,4,10	0/1:3,0:3:1.20:1,0,4	./.	1/1:5,3:8:11.67:129,12,0	0/1:1,2:3:7.90:73,0,8	1/1:10,8:13:4.10:352,4,0	0/1:10,4:11:52.92:156,0,53	1/1:10,5:12:20.98:251,21,0	1/1:6,0:4:0.47:1,0,0	1/1:1,1:2:3.01:33,3,0	0/0:2,0:2:3.01:0,3,33	./.	0/0:4,0:4:8.61:0,9,82	1/1:3,2:5:14.98:172,15,0	1/1:9,6:13:28.88:239,29,0	1/1:0,1:2:6:58,6,0	1/1:9,3:12:22.41:248,22,0
chr10	59246235	.	TTTA	T	1359.40	PASS	AB=0.974;AC=29;AF=0.537;AN=54;BaseQRankSum=0.719;DP=268;FS=0.000;HRun=0;HaplotypeScore=65.5593;InbreedingCoeff=0.1706;MQ=45.46;MQ0=32;MQRankSum=-1.588;QD=7.31;ReadPosRankSum=0.199;VQSLOD=2.1334;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:13,1:10:99:132,0,149	0/0:2,0:2:5.98:0,6,58	0/0:35,0:8:11.17:0,11,136	0/0:27,0:7:13.84:0,14,186	0/1:8,2:9:6.18:86,0,6	0/1:11,0:10:13.68:14,0,27	1/1:5,1:4:6.02:89,6,0	0/1:25,0:22:41.71:42,0,419	0/0:2,0:2:1.82:0,2,5	1/1:8,1:9:20.83:143,21,0	1/1:6,1:7:8.85:67,9,0	0/0:4,0:4:6.49:0,6,107	0/1:3,0:3:33.24:33,0,46	0/0:3,0:2:2.50:0,2,9	1/1:8,0:8:1.11:52,1,0	0/1:3,0:3:1.50:2,0,19	0/1:18,0:13:26.90:27,0,184	0/1:14,0:11:82.59:83,0,129	1/1:15,1:12:0.36:149,0,0	0/1:5,0:3:0:0,0,0	1/1:2,0:2:3.01:33,3,0	0/0:2,0:2:6.02:0,6,95	./.	0/0:4,0:4:8.97:0,9,164	1/1:3,2:5:12.51:132,13,0	1/1:14,1:13:21.85:141,22,0	1/1:3,0:3:2.44:10,2,0	1/1:8,4:12:14.04:287,14,0
chr10	59246237	.	TATTTA	T	1453.83	PASS	AB=0.924;AC=23;AF=0.442;AN=52;BaseQRankSum=-4.282;DP=256;FS=0.651;HRun=0;HaplotypeScore=66.7013;InbreedingCoeff=0.0335;MQ=45.07;MQ0=32;MQRankSum=-1.551;QD=9.69;ReadPosRankSum=-4.772;VQSLOD=0.5900;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:14,0:10:79.53:80,0,88	0/0:2,0:2:5.05:0,5,64	0/0:31,0:7:11.93:0,12,135	0/0:27,0:7:17.66:0,18,188	0/1:10,0:9:5.34:93,0,5	0/0:10,0:10:0.73:0,1,33	1/1:5,0:3:4.56:36,5,0	0/1:21,0:19:11.27:11,0,305	0/0:2,0:2:3.01:0,3,32	1/1:7,2:9:18.19:264,18,0	0/1:5,0:6:3.49:62,0,3	0/0:4,0:4:7.27:0,7,158	0/1:4,0:3:0.41:0,0,94	1/1:3,0:2:3.01:35,3,0	0/1:4,4:8:36.75:110,0,37	0/1:3,0:3:12.08:12,0,40	0/0:17,0:12:27.70:0,28,332	0/1:13,0:10:23.68:24,0,191	0/1:16,1:13:14.97:255,0,15	./.	1/1:2,0:2:2.90:16,3,0	0/0:2,0:2:6.02:0,6,90	./.	0/0:3,0:3:9.03:0,9,180	1/1:5,0:5:3.42:107,3,0	0/1:9,5:12:5.35:265,0,5	0/1:3,0:3:16.17:31,0,16	1/1:11,1:12:13.90:207,14,0
chr10	59246238	.	A	AT	790.69	PASS	AB=0.860;AC=25;AF=0.481;AN=52;BaseQRankSum=2.420;DP=259;FS=0.725;HRun=3;HaplotypeScore=61.2481;InbreedingCoeff=0.1163;MQ=44.55;MQ0=34;MQRankSum=-3.388;QD=4.62;ReadPosRankSum=1.820;VQSLOD=0.4920;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:12,0:9:4.94:5,0,104	0/0:3,0:3:5.88:0,6,37	0/0:33,0:7:10.41:0,10,80	0/1:27,0:7:3.68:4,0,57	0/1:7,0:8:7.15:32,0,7	0/0:10,0:10:5.05:0,5,40	1/1:4,1:3:5.81:45,6,0	0/0:22,0:19:13.11:0,13,124	1/1:2,0:2:2.60:10,3,0	0/1:6,3:9:6.38:84,0,6	1/1:5,1:6:10.20:71,10,0	0/0:4,0:4:6.01:0,6,57	0/0:5,0:4:7.50:0,8,48	0/0:3,1:2:2.50:0,2,9	1/1:5,3:8:6.36:94,6,0	0/1:2,0:3:9.02:11,0,9	0/1:18,0:13:38.31:38,0,46	0/1:12,0:10:13.28:13,0,63	1/1:14,4:13:8.80:142,9,0	./.	0/1:1,1:2:0:0,0,0	0/0:2,0:2:6.02:0,6,70	./.	0/1:3,0:3:14.14:14,0,63	0/1:4,1:5:4.04:56,0,4	0/1:11,3:12:22.83:103,0,23	1/1:2,1:3:6.88:58,7,0	1/1:12,0:12:17.04:167,17,0
chr10	59246241	.	TA	T	1037.27	PASS	AB=0.915;AC=29;AF=0.558;AN=52;BaseQRankSum=0.250;DP=255;FS=1.439;HRun=1;HaplotypeScore=57.4075;InbreedingCoeff=0.1724;MQ=44.53;MQ0=36;MQRankSum=-1.592;QD=5.14;ReadPosRankSum=-0.357;VQSLOD=0.1964;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:12,0:8:33.91:34,0,57	0/1:3,0:3:4.49:13,0,4	0/1:28,1:7:2.61:3,0,42	0/0:26,2:7:16.27:0,16,116	1/1:9,0:8:7.10:52,7,0	0/0:9,0:9:5.97:0,6,51	1/1:5,0:3:4.09:17,4,0	0/1:16,4:17:51.19:51,0,92	0/0:2,0:2:1.25:0,1,3	1/1:7,2:9:21.64:124,22,0	0/1:3,3:6:0.50:47,0,1	0/0:4,0:4:6.49:0,6,70	0/1:5,0:4:1.25:1,0,67	1/1:2,2:2:3.01:35,3,0	1/1:8,0:8:14.31:75,14,0	0/1:3,0:3:3.01:6,0,3	0/1:20,0:14:38.15:38,0,47	0/1:12,0:9:37.41:37,0,58	1/1:14,3:12:33.72:246,34,0	./.	0/0:2,0:2:0:0,0,0	0/0:3,0:3:5.99:0,6,67	./.	0/1:3,0:3:2.81:3,0,66	1/1:4,1:5:12.88:59,13,0	1/1:10,3:11:18.49:157,18,0	0/1:1,2:3:1.32:52,0,1	1/1:11,2:12:21.12:138,21,0
chr10	59246748	.	T	TGG	1080.69	PASS	AB=0.570;AC=13;AF=0.232;AN=56;BaseQRankSum=8.020;DP=564;FS=3.096;HRun=9;HaplotypeScore=80.9270;InbreedingCoeff=0.7163;MQ=79.56;MQ0=0;MQRankSum=-1.309;QD=6.80;ReadPosRankSum=-1.293;VQSLOD=-0.3195;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,0:22:3.71:74,4,0	1/1:2,7:10:11.35:147,11,0	0/0:22,0:22:51.09:0,51,529	0/0:19,0:20:41.78:0,42,396	0/1:6,0:25:5.46:85,0,5	0/0:19,0:20:56.88:0,57,586	0/0:28,0:28:66.08:0,66,686	1/1:4,5:12:18.41:218,18,0	0/1:5,0:25:0.02:86,0,0	0/0:32,0:33:87.17:0,87,911	0/0:13,0:13:33.08:0,33,351	0/0:14,0:14:39.09:0,39,415	0/0:17,0:17:38.78:0,39,385	0/0:25,0:25:60.09:0,60,620	0/0:21,0:21:54.11:0,54,566	0/1:5,0:17:32.89:55,0,33	1/1:10,6:18:23.42:476,23,0	1/1:6,0:30:6.78:111,7,0	0/0:10,0:11:26.80:0,27,267	0/0:24,0:24:60.03:0,60,612	0/0:20,0:20:35.29:0,35,426	0/0:23,0:24:56.64:0,57,565	0/0:20,0:20:18.46:0,18,356	0/0:22,0:22:57.09:0,57,590	0/0:12,0:12:33.07:0,33,347	0/0:26,0:28:74.63:0,75,756	0/0:23,0:23:63.16:0,63,670	0/0:8,0:8:24.04:0,24,247
chr10	59248091	.	AAGAGAGAGAGAGAGAGAG	A	2169.73	PASS	AB=0.825;AC=20;AF=0.370;AN=54;BaseQRankSum=5.190;DP=525;FS=51.127;HRun=0;HaplotypeScore=224.4602;InbreedingCoeff=0.5978;MQ=56.20;MQ0=14;MQRankSum=-4.321;QD=9.56;ReadPosRankSum=0.255;VQSLOD=1.2122;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:33.09:0,33,838	0/0:9,0:9:12.03:0,12,499	./.	0/1:23,0:9:0:0,0,0	0/0:20,0:19:18.01:0,18,354	0/0:13,0:18:16.28:0,16,266	0/0:18,0:24:24.01:0,24,471	0/0:18,0:17:18.06:0,18,580	0/0:19,0:19:30.10:0,30,1372	0/1:14,0:21:99:127,0,120	0/1:11,1:22:24.89:134,0,25	0/0:13,0:16:9.03:0,9,260	0/0:12,0:14:33.11:0,33,772	1/1:13,1:15:12.03:441,12,0	1/1:10,9:20:15.94:659,16,0	0/0:10,0:10:12.01:0,12,422	0/0:23,0:23:39.58:0,40,1738	0/0:15,0:14:21.05:0,21,549	1/1:21,0:21:2.93:21,3,0	0/1:20,1:23:96.92:197,0,97	1/1:17,0:17:8.60:49,9,0	0/0:21,0:22:18.06:0,18,470	0/0:14,0:15:24.74:0,25,476	0/0:19,0:20:14.29:0,14,460	1/1:10,5:14:3.01:136,3,0	1/1:12,10:22:20.70:385,21,0	1/1:20,0:20:11.94:175,12,0	1/1:8,0:5:3:27,3,0
chr10	59248135	.	GAGAGAGAGAA	G	1772.30	PASS	AB=0.998;AC=21;AF=0.375;AN=56;BaseQRankSum=8.155;DP=432;FS=55.949;HRun=0;HaplotypeScore=133.2342;InbreedingCoeff=-0.4560;MQ=50.81;MQ0=16;MQRankSum=-1.583;QD=5.49;ReadPosRankSum=4.386;VQSLOD=0.4026;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:27,1:27:3.50:302,0,3	0/1:12,0:12:27.82:28,0,117	0/0:9,0:8:16.81:0,17,199	0/0:7,0:5:5.37:0,5,88	1/1:3,14:16:5.95:112,6,0	0/1:12,0:12:30.75:122,0,31	0/1:19,0:18:68.34:68,0,258	0/1:31,0:26:99:217,0,114	0/1:18,0:17:40.93:41,0,290	0/1:14,0:13:52.21:52,0,151	0/1:13,0:13:37.96:38,0,38	0/0:17,0:16:7.58:0,8,158	0/1:6,0:6:36.22:152,0,36	0/1:12,0:11:99:121,0,117	0/1:16,0:16:99:173,0,105	0/1:11,0:10:91.81:92,0,124	0/1:25,0:25:31.70:32,0,671	0/1:14,0:13:41.36:133,0,41	0/0:14,0:12:33.61:0,34,235	0/1:6,0:6:58.94:85,0,59	0/0:24,0:23:59.71:0,60,479	0/0:10,0:10:24:0,24,214	0/1:12,0:12:30.99:31,0,99	0/1:25,0:24:43.97:44,0,308	0/1:14,0:13:18.93:19,0,143	0/1:18,0:17:72.06:72,0,132	0/0:12,0:12:19.99:0,20,234	0/0:16,0:15:43.44:0,43,357
chr10	59248144	.	AAAGG	A	1317.87	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=2.348;DP=439;FS=11.198;HRun=0;HaplotypeScore=98.2406;InbreedingCoeff=0.8112;MQ=52.64;MQ0=14;MQRankSum=1.337;QD=12.20;ReadPosRankSum=0.845;VQSLOD=2.4615;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:21:3.62:33,4,0	1/1:10,0:10:12.54:139,13,0	0/0:15,0:12:35.80:0,36,563	0/0:12,0:9:9.05:0,9,299	0/0:15,0:14:0.63:0,1,80	0/0:12,0:12:11.13:0,11,87	0/0:23,0:22:44.57:0,45,660	1/1:5,22:22:58.31:812,58,0	1/1:9,0:8:4.45:28,4,0	0/0:16,0:15:24.38:0,24,401	0/0:13,0:13:6.90:0,7,89	0/0:15,0:15:30.29:0,30,403	0/0:9,0:9:26.16:0,26,332	0/0:13,0:12:30.03:0,30,298	0/0:20,0:20:31.94:0,32,491	1/1:9,0:8:3.67:18,4,0	1/1:21,0:21:29.90:439,30,0	1/1:10,0:10:6.96:21,7,0	0/0:15,0:13:23.95:0,24,348	0/0:6,0:6:14.12:0,14,159	0/0:25,0:24:65.32:0,65,926	0/0:11,0:11:30.10:0,30,482	0/0:13,0:13:30.88:0,31,445	0/0:29,0:28:68.55:0,69,1013	0/0:15,0:14:26.95:0,27,401	0/0:18,0:17:23.33:0,23,309	0/0:17,0:17:42.13:0,42,692	0/0:19,0:18:46.54:0,47,799
chr10	59249808	.	TA	T	7769.82	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=7.743;DP=467;FS=4.576;HRun=8;HaplotypeScore=45.9972;InbreedingCoeff=0.9921;MQ=70.56;MQ0=1;MQRankSum=-1.167;QD=22.65;ReadPosRankSum=2.689;VQSLOD=5.2589;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:78.19:0,78,904	1/1:0,7:7:18.03:174,18,0	0/0:21,0:14:29.80:0,30,323	0/0:11,0:9:13.67:0,14,163	0/0:13,0:13:36.08:0,36,410	1/1:1,15:16:36.06:348,36,0	1/1:0,15:15:39.06:376,39,0	1/1:3,17:20:50.44:468,50,0	0/0:16,0:16:45.59:0,46,530	1/1:0,20:20:60.08:574,60,0	1/1:0,16:16:42.07:405,42,0	1/1:2,13:15:27.04:261,27,0	1/1:1,19:20:48.08:463,48,0	1/1:1,12:13:27.04:261,27,0	1/1:1,15:16:36.06:348,36,0	0/0:8,0:8:24.06:0,24,278	1/1:1,23:24:57.09:550,57,0	0/0:25,0:25:69.21:0,69,833	1/1:4,14:18:42.04:399,42,0	1/1:3,9:12:24.02:226,24,0	1/1:2,15:17:36.06:347,36,0	1/1:0,12:12:33.05:316,33,0	1/1:0,10:10:21.03:203,21,0	1/1:1,19:20:42.07:405,42,0	1/1:1,19:20:48.08:463,48,0	1/1:2,18:20:57.08:546,57,0	1/1:2,19:21:42.07:405,42,0	1/1:3,8:11:24.04:232,24,0
chr10	59250369	.	CTA	C	684.06	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=7.033;DP=426;FS=21.373;HRun=0;HaplotypeScore=73.7622;InbreedingCoeff=0.8317;MQ=68.15;MQ0=7;MQRankSum=-1.227;QD=10.06;ReadPosRankSum=0.259;VQSLOD=1.2958;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:21,2:23:35.45:262,35,0	0/0:8,0:8:14.79:0,15,106	0/0:29,0:16:36.73:0,37,383	0/0:27,0:18:47.65:0,48,434	1/1:10,1:11:23.94:192,24,0	0/0:8,0:7:7.82:0,8,91	0/0:18,0:18:32.91:0,33,341	0/0:30,0:28:74.55:0,75,601	1/1:6,2:8:5.99:51,6,0	0/0:20,0:19:40.14:0,40,397	0/0:9,0:9:23.97:0,24,200	0/0:15,0:15:16.32:0,16,173	0/0:13,0:13:21.64:0,22,194	0/0:16,0:16:18.95:0,19,181	0/0:15,0:15:25.03:0,25,242	1/1:10,2:12:11.30:101,11,0	0/0:12,0:12:19.87:0,20,128	1/1:13,0:13:35.58:243,36,0	0/0:15,0:15:26.88:0,27,300	0/0:12,0:12:25.01:0,25,242	0/0:23,0:21:27.71:0,28,278	0/0:4,0:4:3.19:0,3,65	0/0:18,0:18:44:0,44,365	0/0:11,0:11:7.23:0,7,160	0/0:14,0:14:15.13:0,15,251	0/0:16,0:16:38.11:0,38,350	0/0:13,0:13:7.59:0,8,169	0/0:11,0:11:3.61:0,4,145
chr10	59250372	.	TAC	T	1121.29	PASS	AB=0.956;AC=41;AF=0.891;AN=46;BaseQRankSum=2.393;DP=433;FS=0.000;HRun=0;HaplotypeScore=74.8392;InbreedingCoeff=-0.0656;MQ=66.97;MQ0=7;MQRankSum=-0.242;QD=3.45;ReadPosRankSum=1.022;VQSLOD=1.7925;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:21:2.44:12,2,0	1/1:6,0:8:5.68:28,6,0	./.	./.	0/1:8,0:8:0:0,0,0	1/1:9,0:8:3.01:31,3,0	0/1:21,0:21:4.45:4,0,164	./.	1/1:8,0:8:2.84:14,3,0	1/1:20,0:19:9.02:96,9,0	./.	0/1:13,1:14:34.06:47,0,34	1/1:11,3:14:2.02:31,2,0	1/1:13,3:16:2.74:32,3,0	1/1:15,0:15:8.98:79,9,0	1/1:12,0:12:5.68:28,6,0	1/1:9,0:12:8.52:42,9,0	./.	1/1:17,0:17:6.01:58,6,0	1/1:14,0:14:8.99:80,9,0	1/1:25,1:24:8.89:79,9,0	1/1:3,1:4:3.01:32,3,0	1/1:17,0:17:3:26,3,0	0/1:9,2:11:33.94:55,0,34	0/1:14,0:14:9.92:106,0,10	1/1:19,0:19:14.68:109,15,0	1/1:14,0:14:15:143,15,0	1/1:10,1:11:9.02:96,9,0
chr10	59250414	.	CACACACAG	C	1007.83	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=4.625;DP=463;FS=1.264;HRun=0;HaplotypeScore=144.1773;InbreedingCoeff=0.6641;MQ=56.30;MQ0=18;MQRankSum=-2.757;QD=9.08;ReadPosRankSum=0.836;VQSLOD=2.4406;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:20,2:21:38.68:373,39,0	0/1:6,0:6:56.21:56,0,67	0/0:31,0:18:35.09:0,35,455	0/1:32,0:21:13:13,0,437	1/1:9,1:10:17.30:170,17,0	0/0:14,0:13:29.59:0,30,330	0/0:25,0:25:51.92:0,52,1169	0/0:20,0:19:50.91:0,51,453	1/1:8,2:10:20.26:167,20,0	0/0:23,0:21:60.04:0,60,866	0/0:9,0:9:21.02:0,21,355	0/0:19,0:19:29.75:0,30,572	0/0:14,0:13:26.72:0,27,315	0/0:9,0:8:8.99:0,9,149	0/0:26,0:24:56.70:0,57,905	1/1:5,1:6:9:174,9,0	0/1:13,0:13:83.86:84,0,99	1/1:12,0:11:12.03:149,12,0	0/0:14,0:14:35.25:0,35,430	0/0:11,0:11:15.04:0,15,340	0/0:44,0:41:90.47:0,90,1404	0/0:12,0:12:15.03:0,15,266	0/0:10,0:10:26.95:0,27,365	0/0:9,0:9:24.02:0,24,578	0/0:18,0:18:45.08:0,45,754	0/0:19,0:19:52.93:0,53,831	0/0:12,0:12:33.08:0,33,688	0/0:13,0:13:35.98:0,36,515
chr10	59250466	.	AATG	A	10844.75	PASS	AB=0.577;AC=51;AF=0.911;AN=56;BaseQRankSum=4.204;DP=455;FS=12.502;HRun=0;HaplotypeScore=139.1559;InbreedingCoeff=0.6915;MQ=56.46;MQ0=0;MQRankSum=-6.494;QD=26.65;ReadPosRankSum=3.987;VQSLOD=4.6644;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,21:26:51.09:707,51,0	1/1:2,3:5:12.04:173,12,0	0/0:23,0:21:27.78:0,28,480	0/0:24,0:20:33.11:0,33,588	1/1:3,5:8:14.71:111,15,0	0/1:4,0:15:9.13:156,0,9	1/1:5,0:15:3.49:127,3,0	1/1:13,20:33:72.16:961,72,0	1/1:3,11:14:30.10:431,30,0	1/1:3,23:26:72.24:1029,72,0	1/1:3,14:17:44.83:538,45,0	1/1:4,0:16:37.27:256,37,0	1/1:5,0:12:8.89:150,9,0	1/1:2,8:10:27.09:388,27,0	1/1:4,29:32:93.16:1268,93,0	1/1:3,6:9:24.08:344,24,0	1/1:6,9:15:27.01:339,27,0	1/1:4,7:11:24.08:340,24,0	1/1:11,6:16:33.09:426,33,0	1/1:6,8:14:33.04:443,33,0	1/1:7,10:16:27.05:364,27,0	1/1:5,0:22:17.86:231,18,0	1/1:2,0:11:14.88:105,15,0	1/1:3,0:8:11.90:84,12,0	1/1:4,15:19:48.03:639,48,0	1/1:3,8:11:27.09:383,27,0	1/1:2,11:13:36.12:508,36,0	1/1:1,8:9:24.08:345,24,0
chr10	59250503	.	TA	T	13051.90	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=0.512;DP=511;FS=11.502;HRun=5;HaplotypeScore=128.7416;InbreedingCoeff=0.9352;MQ=56.87;MQ0=0;MQRankSum=-7.169;QD=27.25;ReadPosRankSum=4.124;VQSLOD=3.2600;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,21:28:48.11:533,48,0	1/1:0,8:8:18.05:204,18,0	0/0:9,0:8:15.05:0,15,191	0/0:23,0:20:23.05:0,23,517	1/1:0,12:12:27.07:306,27,0	1/1:2,18:20:54.15:612,54,0	1/1:1,14:15:39.11:442,39,0	1/1:9,36:45:99:1216,108,0	1/1:2,16:18:39.11:442,39,0	1/1:3,34:37:99:1147,102,0	1/1:1,17:18:48.14:544,48,0	1/1:5,15:20:39.11:442,39,0	1/1:3,13:16:39.11:442,39,0	1/1:0,14:14:42.12:476,42,0	1/1:1,34:35:87.24:986,87,0	1/1:0,12:12:27.08:306,27,0	1/1:2,11:13:21:213,21,0	1/1:2,12:14:33.09:374,33,0	1/1:2,14:16:39.10:435,39,0	1/1:0,27:27:78.22:884,78,0	1/1:1,5:5:9.03:102,9,0	1/1:3,16:19:48.14:544,48,0	1/1:0,15:15:33.09:373,33,0	1/1:1,6:7:12.03:136,12,0	1/1:2,24:26:69.18:771,69,0	1/1:2,10:12:30.08:340,30,0	1/1:1,17:18:51.15:578,51,0	1/1:0,8:8:18.05:204,18,0
chr10	59250702	.	CCA	C	13347.15	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=5.222;DP=699;FS=7.057;HRun=0;HaplotypeScore=107.5680;InbreedingCoeff=0.9993;MQ=72.71;MQ0=3;MQRankSum=-1.046;QD=28.34;ReadPosRankSum=4.036;VQSLOD=6.5322;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,42:44:99:1351,108,0	1/1:0,8:8:24.04:283,24,0	0/0:30,0:24:45.13:0,45,694	0/0:27,0:25:44.75:0,45,670	1/1:8,14:22:39.12:488,39,0	0/0:26,2:28:28.19:0,28,942	0/0:30,0:30:75.26:0,75,1222	1/1:13,26:39:78.24:962,78,0	1/1:2,25:27:69.22:863,69,0	1/1:6,23:29:63.19:770,63,0	1/1:0,14:14:39.12:487,39,0	0/0:31,0:31:75.26:0,75,1230	0/0:16,0:16:42.14:0,42,672	1/1:2,21:23:51.16:638,51,0	1/1:3,21:23:48.15:600,48,0	1/1:0,12:12:30.10:375,30,0	1/1:5,20:26:57.18:713,57,0	1/1:3,19:22:54.17:675,54,0	1/1:7,13:20:39.05:454,39,0	1/1:2,18:20:51.16:638,51,0	1/1:8,58:66:99:1839,147,0	0/0:12,0:12:33.10:0,33,515	0/0:18,0:18:45.14:0,45,717	0/0:36,0:36:99:0,102,1684	1/1:1,17:18:33.11:413,33,0	1/1:2,23:25:66.21:823,66,0	1/1:0,17:17:42.13:525,42,0	1/1:4,11:15:36.12:450,36,0
chr10	59251863	.	TGAGTCAGA	T	21493.40	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=16.476;DP=613;FS=4.546;HRun=0;HaplotypeScore=184.9321;InbreedingCoeff=0.9982;MQ=85.38;MQ0=0;MQRankSum=-16.082;QD=55.83;ReadPosRankSum=3.326;VQSLOD=4.7343;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,23:28:48.16:1304,48,0	1/1:1,10:11:21.07:568,21,0	0/0:32,0:32:45.95:0,46,2687	0/0:27,0:25:47.77:0,48,1685	1/1:3,25:28:57.15:1453,57,0	0/0:23,0:23:66.23:0,66,2810	0/0:22,0:22:60.21:0,60,2354	1/1:9,24:33:69.20:1321,69,0	1/1:1,15:16:42.14:1146,42,0	1/1:0,20:20:51.17:1362,51,0	1/1:0,17:17:48.12:1244,48,0	0/0:25,0:25:63.19:0,63,2507	0/0:30,0:30:78.27:0,78,3209	1/1:4,17:21:45.15:1225,45,0	1/1:2,23:25:48.16:1306,48,0	1/1:3,14:17:33.11:883,33,0	1/1:1,17:18:24.08:655,24,0	1/1:0,15:15:33.11:900,33,0	1/1:9,14:23:39.13:838,39,0	1/1:2,15:17:30.10:767,30,0	1/1:4,10:14:21.07:571,21,0	0/0:21,0:21:57.20:0,57,2247	0/0:24,0:24:69.24:0,69,2732	0/0:24,0:24:72.23:0,72,2978	1/1:0,19:19:51.18:1389,51,0	1/1:1,25:26:72.23:1861,72,0	1/1:1,25:26:66.23:1801,66,0	1/1:0,11:11:33.11:900,33,0
chr10	59254025	.	ACACACACACACGCGCGCGCGCG	A	5578	PASS	AB=0.970;AC=21;AF=0.389;AN=54;BaseQRankSum=3.134;DP=315;FS=30.663;HRun=0;HaplotypeScore=184.7624;InbreedingCoeff=0.0305;MQ=45.15;MQ0=12;MQRankSum=-4.868;QD=33.20;ReadPosRankSum=-2.816;VQSLOD=2.3801;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:9,2:10:9.01:393,9,0	0/1:7,0:6:99:206,0,107	0/1:10,0:3:18.01:18,0,50	0/0:8,0:2:6.02:0,6,106	1/1:10,6:16:17.84:1004,18,0	0/0:14,0:14:21.05:0,21,1180	0/0:16,0:16:21.05:0,21,1220	0/1:13,0:12:99:520,0,402	1/1:0,8:8:15.05:927,15,0	0/1:13,0:13:99:182,0,917	0/0:18,0:17:12.04:0,12,509	0/0:13,0:13:12.51:0,13,717	0/0:15,0:15:19:0,19,963	1/1:8,0:8:5.87:213,6,0	0/0:5,0:5:0.82:0,1,151	1/1:6,0:6:6.02:235,6,0	0/1:7,0:5:42.91:43,0,103	0/1:4,4:8:25.97:959,0,26	0/1:5,0:5:99:209,0,229	0/0:11,0:10:9.03:0,9,587	./.	0/0:10,0:8:12.04:0,12,837	0/0:10,0:10:18.04:0,18,942	0/0:25,0:24:26.77:0,27,1856	0/1:12,0:12:90.34:90,0,516	0/1:14,0:13:99:288,0,806	0/1:19,0:18:79.15:79,0,935	0/1:11,0:11:99:211,0,450
chr10	59254076	.	TTTTAA	T	5588.24	PASS	AB=0.770;AC=19;AF=0.339;AN=56;BaseQRankSum=9.625;DP=472;FS=123.373;HRun=0;HaplotypeScore=161.0483;InbreedingCoeff=-0.5158;MQ=58.69;MQ0=0;MQRankSum=-9.117;QD=15.83;ReadPosRankSum=2.834;VQSLOD=1.3822;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:17,5:22:99:210,0,1516	0/1:3,4:7:99:150,0,281	0/0:7,0:7:14.22:0,14,348	0/0:11,0:9:27:0,27,611	0/1:19,13:32:99:549,0,1344	0/0:19,0:19:39.12:0,39,1181	0/0:15,0:15:36.12:0,36,1199	0/1:18,4:22:99:263,0,1350	0/1:11,4:15:99:237,0,677	0/1:15,5:20:99:281,0,1301	0/1:17,2:19:90.46:90,0,771	0/0:16,0:16:39.13:0,39,1294	0/0:16,0:16:33.11:0,33,1083	0/1:12,5:17:99:244,0,937	0/1:16,7:23:99:318,0,1327	0/1:13,3:16:99:171,0,1142	0/1:10,3:13:99:137,0,604	0/1:9,7:16:99:390,0,668	0/1:7,8:15:99:453,0,554	0/1:14,4:18:99:269,0,1070	0/1:4,1:5:39.45:39,0,381	0/0:8,0:8:24.08:0,24,787	0/0:10,0:10:24.04:0,24,697	0/0:17,0:17:21.07:0,21,693	0/1:15,9:24:99:438,0,1278	0/1:13,8:21:99:400,0,1064	0/1:14,11:25:99:608,0,928	0/1:17,6:23:99:342,0,1282
chr10	59254178	.	G	GA	17825.48	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=3.723;DP=578;FS=1.609;HRun=0;HaplotypeScore=74.6486;InbreedingCoeff=0.9992;MQ=80.11;MQ0=0;MQRankSum=-7.645;QD=42.14;ReadPosRankSum=3.597;VQSLOD=5.5527;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,42:42:99:1677,105,0	1/1:0,7:7:21.07:335,21,0	0/0:21,0:21:63.20:0,63,854	0/0:19,0:19:44.99:0,45,629	1/1:0,18:18:45.15:719,45,0	0/0:20,0:20:60.19:0,60,824	0/0:14,0:14:42.12:0,42,569	1/1:0,24:24:72.23:1129,72,0	1/1:0,20:20:60.20:959,60,0	1/1:0,27:27:78.27:1241,78,0	1/1:0,14:14:33.11:526,33,0	0/0:21,0:21:63.21:0,63,881	0/0:14,0:14:42.14:0,42,587	1/1:0,17:17:42.14:671,42,0	1/1:0,24:24:60.20:946,60,0	1/1:0,20:20:51.17:815,51,0	1/1:1,35:36:99:1558,99,0	1/1:3,25:28:69.22:1072,69,0	1/1:0,16:14:42.14:671,42,0	1/1:0,14:14:36.12:573,36,0	1/1:1,35:36:93.32:1486,93,0	0/0:11,0:11:30.10:0,30,416	0/0:12,0:12:33.11:0,33,452	0/0:23,0:23:66.21:0,66,908	1/1:0,18:18:48.16:766,48,0	1/1:1,22:23:66.23:1054,66,0	1/1:0,18:18:42.14:670,42,0	1/1:0,21:21:60.20:958,60,0
chr10	59254300	.	A	AT	9888.33	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=1.709;DP=593;FS=10.955;HRun=7;HaplotypeScore=76.5199;InbreedingCoeff=0.9637;MQ=66.69;MQ0=1;MQRankSum=-3.751;QD=23.49;ReadPosRankSum=1.602;VQSLOD=4.5292;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:49,0:49:99:674,106,0	1/1:1,4:5:12.04:145,12,0	0/0:24,0:22:54.12:0,54,523	0/0:14,0:12:27.02:0,27,251	1/1:21,0:21:4.91:214,5,0	0/0:24,0:24:60.09:0,60,579	0/0:23,0:23:66.07:0,66,626	1/1:1,27:28:81.25:978,81,0	1/1:31,0:31:61.24:403,61,0	1/1:4,21:25:63.18:749,63,0	1/1:3,17:20:39.12:470,39,0	0/0:19,0:19:51.08:0,51,492	0/0:13,0:13:30.04:0,30,290	1/1:0,26:26:69.17:817,69,0	1/1:4,23:27:57.17:689,57,0	1/1:17,0:17:39.54:194,40,0	1/1:1,29:30:75.23:902,75,0	1/1:25,0:25:36.19:297,36,0	1/1:3,20:23:63.16:735,63,0	1/1:2,6:8:18.06:217,18,0	1/1:2,13:15:36.11:435,36,0	0/0:19,0:19:51.08:0,51,492	0/0:15,0:15:45.07:0,45,434	0/0:21,0:21:54.06:0,54,515	1/1:3,7:10:18.06:217,18,0	1/1:4,30:34:90.02:1027,90,0	1/1:1,18:19:50.99:616,51,0	1/1:4,4:8:9.03:109,9,0
chr10	59254307	.	T	TA	6980.77	PASS	AB=1.000;AC=34;AF=0.607;AN=56;BaseQRankSum=5.311;DP=588;FS=8.396;HRun=3;HaplotypeScore=87.2002;InbreedingCoeff=0.6271;MQ=69.28;MQ0=1;MQRankSum=-3.416;QD=17.03;ReadPosRankSum=5.387;VQSLOD=4.0814;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,42:46:99:1786,132,0	0/1:5,0:5:12.54:39,0,13	0/0:29,0:29:78.46:0,78,774	0/0:12,0:11:26.95:0,27,251	1/1:2,19:21:45.08:583,45,0	0/0:22,0:22:66.18:0,66,767	0/0:22,0:22:60.16:0,60,705	0/1:32,0:32:28.21:174,0,28	1/1:2,30:32:81.27:1103,81,0	1/1:25,0:25:2.40:187,2,0	1/1:19,0:19:3.80:182,4,0	0/0:21,0:21:60.13:0,60,673	0/0:14,0:14:42.08:0,42,460	1/1:27,0:27:41.93:237,42,0	1/1:23,0:23:50.33:217,50,0	1/1:0,18:18:42.14:574,42,0	1/1:32,0:32:7.34:228,7,0	1/1:1,19:20:57.19:778,57,0	0/1:24,0:24:37.04:134,0,37	1/1:6,0:6:17.13:97,17,0	1/1:15,0:15:10.93:96,11,0	0/0:22,0:22:60.12:0,60,672	0/0:16,0:16:48.10:0,48,554	0/0:20,0:20:51.15:0,51,609	0/1:9,0:9:31.94:32,0,32	1/1:31,1:32:52.53:311,53,0	1/1:20,0:20:10.48:177,10,0	1/1:4,0:4:8.65:47,9,0
chr10	59254471	.	ATG	A	8481.84	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=7.307;DP=595;FS=1.304;HRun=0;HaplotypeScore=133.2335;InbreedingCoeff=0.9793;MQ=60.83;MQ0=3;MQRankSum=-4.405;QD=22.44;ReadPosRankSum=1.541;VQSLOD=5.0629;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,25:31:51.16:638,51,0	1/1:3,5:8:12.04:150,12,0	0/0:33,0:23:42.14:0,42,682	0/0:28,0:20:40.35:0,40,563	1/1:1,12:13:33.11:413,33,0	0/0:20,0:20:51.17:0,51,839	0/0:28,0:28:60.17:0,60,927	1/1:10,25:35:75.23:925,75,0	1/1:6,22:28:57.65:714,58,0	1/1:5,15:20:51.10:607,51,0	1/1:7,13:20:33.09:399,33,0	0/0:25,0:25:45.14:0,45,712	0/0:19,0:19:36.12:0,36,594	1/1:7,12:19:30.09:375,30,0	1/1:4,13:17:21.05:243,21,0	1/1:2,12:14:24.42:301,24,0	1/1:7,19:26:45.14:562,45,0	1/1:3,8:11:18.06:225,18,0	1/1:5,14:19:39.11:475,39,0	1/1:2,12:15:21.07:260,21,0	1/1:7,27:34:60.10:742,60,0	0/0:11,0:11:15.05:0,15,248	0/0:16,0:16:39.13:0,39,638	0/0:37,0:37:69.24:0,69,1129	1/1:4,8:12:9.02:100,9,0	1/1:11,19:30:66.15:794,66,0	1/1:4,10:14:30.09:375,30,0	1/1:4,8:12:18.01:185,18,0
chr10	59254514	.	TGC	T	1292.68	PASS	AB=0.858;AC=25;AF=0.446;AN=56;BaseQRankSum=8.523;DP=500;FS=64.398;HRun=0;HaplotypeScore=153.8575;InbreedingCoeff=0.6479;MQ=48.85;MQ0=19;MQRankSum=-6.541;QD=6.21;ReadPosRankSum=0.494;VQSLOD=1.0790;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:61.93:0,62,887	1/1:6,3:9:8.95:69,9,0	0/0:16,0:2:5.60:0,6,40	0/0:27,0:6:11.75:0,12,89	0/0:14,0:14:24.02:0,24,368	0/0:18,0:18:27.14:0,27,184	0/0:28,0:27:24.19:0,24,177	1/1:11,0:8:12.78:101,13,0	0/0:27,0:27:65.02:0,65,723	1/1:10,6:16:35.36:261,35,0	1/1:10,1:11:6.06:91,6,0	0/0:21,0:21:11.51:0,12,149	0/0:20,0:20:10.70:0,11,67	1/1:8,5:13:5.79:110,6,0	1/1:7,6:13:5.88:50,6,0	0/0:11,0:11:11.27:0,11,345	1/1:19,2:21:18.53:101,19,0	0/0:19,0:19:4.14:0,4,485	0/1:19,1:16:14.74:163,0,15	1/1:12,3:15:7.53:73,8,0	1/1:31,0:30:1.61:98,2,0	0/0:11,0:11:5.56:0,6,31	0/0:19,0:18:19.45:0,19,100	0/0:30,0:29:30.85:0,31,268	0/1:7,5:12:2:2,0,6	1/1:9,4:13:24.11:238,24,0	1/1:8,4:12:16.26:116,16,0	0/1:10,1:11:16.08:16,0,18
chr10	59254516	.	CGTGT	C	2425.81	PASS	AB=0.926;AC=37;AF=0.661;AN=56;BaseQRankSum=2.854;DP=491;FS=2.032;HRun=0;HaplotypeScore=159.6786;InbreedingCoeff=0.4384;MQ=48.89;MQ0=18;MQRankSum=-1.214;QD=6.89;ReadPosRankSum=2.956;VQSLOD=2.7551;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:31:8.01:0,8,928	1/1:9,0:9:3:28,3,0	0/0:14,0:3:3:0,3,28	0/0:25,0:4:0:0,0,0	0/0:11,0:11:18.06:0,18,424	0/1:7,10:17:12.19:136,0,12	1/1:10,17:27:27.08:423,27,0	1/1:10,0:7:6.02:75,6,0	0/0:26,0:27:41.57:0,42,659	0/1:16,0:16:4.99:133,0,5	1/1:11,0:11:2.22:7,2,0	1/1:8,13:21:14.88:211,15,0	1/1:2,16:19:15.05:248,15,0	1/1:13,0:13:12.11:91,12,0	1/1:15,0:15:6.51:59,7,0	0/0:11,0:12:27.32:0,27,424	0/1:21,0:21:4.40:196,0,4	0/0:18,0:19:33.83:0,34,543	0/1:20,0:16:19.70:20,0,24	1/1:15,0:15:5.22:35,5,0	0/1:30,0:29:0.59:7,0,1	1/1:2,9:11:2.98:50,3,0	1/1:7,11:17:11.77:197,12,0	1/1:10,20:30:26.92:409,27,0	1/1:12,0:11:3.58:10,4,0	1/1:13,0:13:11.22:89,11,0	1/1:12,0:12:8.45:109,8,0	1/1:11,0:11:9.59:64,10,0
chr10	59254520	.	T	TGC	327.25	PASS	AB=0.973;AC=11;AF=0.196;AN=56;BaseQRankSum=5.305;DP=483;FS=10.816;HRun=0;HaplotypeScore=158.6359;InbreedingCoeff=0.0958;MQ=49.12;MQ0=16;MQRankSum=-0.983;QD=2.14;ReadPosRankSum=-0.952;VQSLOD=1.8057;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,1:33:30.51:0,31,934	0/0:9,0:9:8.84:0,9,60	0/1:11,0:3:6.92:7,0,45	0/0:23,0:3:6.01:0,6,59	0/0:10,0:10:21.03:0,21,299	0/0:17,0:17:29.20:0,29,210	0/1:26,0:25:37.93:38,0,148	0/1:12,0:9:63.98:91,0,64	0/0:25,0:25:60.03:0,60,667	0/0:17,0:17:30.19:0,30,180	0/0:11,0:11:4.16:0,4,68	0/0:21,0:21:31.74:0,32,211	0/0:18,0:18:16.72:0,17,80	0/0:13,0:13:8.61:0,9,87	0/0:15,0:15:0.11:0,0,22	0/0:14,0:14:35.39:0,35,408	0/1:16,5:21:38.86:176,0,39	0/0:19,0:19:44.02:0,44,505	0/0:17,0:14:22.22:0,22,145	0/1:16,0:16:9.20:9,0,48	0/1:30,0:29:0.44:0,0,53	0/0:11,0:11:5.72:0,6,37	0/0:17,0:16:22.80:0,23,148	0/0:28,0:27:45.59:0,46,286	1/1:12,0:11:3.58:10,4,0	0/0:12,0:12:20.12:0,20,161	0/1:15,0:15:22.28:70,0,22	1/1:10,0:10:9.19:61,9,0
chr10	59254528	.	TGTGTGTGTGTGTGC	T	4198.37	PASS	AB=0.893;AC=24;AF=0.429;AN=56;BaseQRankSum=9.263;DP=458;FS=16.062;HRun=0;HaplotypeScore=202.1052;InbreedingCoeff=0.6535;MQ=51.99;MQ0=8;MQRankSum=-6.716;QD=21.20;ReadPosRankSum=2.277;VQSLOD=1.7564;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:72.23:0,72,3251	0/1:3,3:6:4.90:118,0,5	0/0:6,0:2:6:0,6,151	0/0:10,0:2:5.69:0,6,139	0/0:10,0:10:24.07:0,24,1278	0/0:20,0:20:36.11:0,36,905	0/0:27,0:26:44.94:0,45,1334	0/1:7,0:5:6.71:58,0,7	0/0:23,0:23:57.18:0,57,2364	1/1:14,0:14:42.10:1100,42,0	1/1:6,0:6:3.01:42,3,0	0/0:22,0:22:36.08:0,36,864	0/0:18,0:18:17.10:0,17,583	1/1:13,0:13:18.06:482,18,0	1/1:15,1:16:3.45:277,3,0	0/0:15,0:15:40.02:0,40,1523	0/1:17,2:19:21.92:246,0,22	0/0:21,0:21:51.07:0,51,1798	0/1:21,0:17:1.75:284,0,2	1/1:13,1:14:11.51:199,12,0	1/1:30,0:30:11.52:127,12,0	0/0:11,0:11:6.02:0,6,163	0/0:17,0:16:24.27:0,24,614	0/0:28,0:27:44.80:0,45,1338	1/1:13,0:12:8.48:113,8,0	1/1:14,1:15:15.14:454,15,0	1/1:13,1:14:21.03:416,21,0	1/1:10,0:10:21.06:284,21,0
chr10	59254530	.	TGTGTGTGTGTGC	T	2850.65	PASS	AB=0.982;AC=25;AF=0.446;AN=56;BaseQRankSum=9.450;DP=431;FS=30.674;HRun=0;HaplotypeScore=183.1553;InbreedingCoeff=0.6707;MQ=53.09;MQ0=7;MQRankSum=-4.609;QD=15.93;ReadPosRankSum=0.957;VQSLOD=1.4335;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:69.24:0,69,2653	1/1:6,0:6:8.17:122,8,0	0/0:5,0:2:6:0,6,122	0/0:9,0:2:5.69:0,6,112	0/0:9,0:9:21.07:0,21,1110	0/0:20,0:20:35.96:0,36,585	0/0:27,0:26:44.94:0,45,1042	0/1:8,0:6:8.32:70,0,8	0/0:22,0:22:53.88:0,54,1880	1/1:8,6:14:33.22:746,33,0	1/1:4,1:5:2.98:21,3,0	0/0:21,0:21:27.08:0,27,570	0/0:18,0:18:16.87:0,17,428	1/1:7,5:12:17.75:333,18,0	1/1:9,5:14:0.76:198,1,0	0/0:14,0:14:40.02:0,40,1318	0/1:20,0:20:18.50:267,0,18	0/0:21,0:21:50.94:0,51,1535	0/1:17,1:14:9.66:190,0,10	1/1:8,2:10:9.83:139,10,0	1/1:25,0:25:14.64:99,15,0	0/0:11,0:11:6.49:0,6,135	0/0:16,0:15:21.28:0,21,427	0/0:30,0:29:47.72:0,48,1062	1/1:6,5:10:11.75:75,12,0	1/1:11,3:14:21.25:379,21,0	1/1:11,3:14:20.82:268,21,0	1/1:7,1:8:20.78:147,21,0
chr10	59254538	.	TGTGC	T	3196.48	PASS	AB=1.000;AC=36;AF=0.643;AN=56;BaseQRankSum=7.569;DP=442;FS=12.382;HRun=0;HaplotypeScore=144.0268;InbreedingCoeff=0.3379;MQ=56.02;MQ0=6;MQRankSum=-4.684;QD=9.49;ReadPosRankSum=2.477;VQSLOD=2.4698;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:49.54:0,50,1305	1/1:4,1:5:8.17:69,8,0	0/1:6,0:4:1.77:2,0,31	0/0:6,0:1:2.68:0,3,11	0/0:9,0:9:21.05:0,21,519	0/1:17,0:17:66.32:66,0,113	0/1:25,0:24:41.26:184,0,41	1/1:7,2:7:17.90:202,18,0	0/0:19,0:19:38.40:0,38,783	1/1:18,0:18:37.63:350,38,0	1/1:4,0:4:2.92:17,3,0	0/1:19,0:19:54.06:103,0,54	0/1:20,0:20:33.92:119,0,34	1/1:13,0:13:17.30:169,17,0	1/1:14,0:14:10.17:112,10,0	0/0:17,0:17:48.31:0,48,678	1/1:16,5:21:20.55:420,21,0	0/0:23,0:23:38.95:0,39,864	1/1:16,0:13:20.64:220,21,0	1/1:12,0:12:17.39:152,17,0	1/1:29,0:29:19.62:133,20,0	0/1:11,0:11:18.84:19,0,19	0/1:17,0:16:58.18:89,0,58	0/1:31,0:30:99:166,0,150	1/1:11,0:10:11.34:65,11,0	1/1:15,0:15:41.46:381,41,0	1/1:14,1:15:19.19:201,19,0	1/1:8,1:9:19.56:146,20,0
chr10	59254540	.	TGC	T	3085.01	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=6.358;DP=456;FS=17.335;HRun=0;HaplotypeScore=137.7225;InbreedingCoeff=0.8658;MQ=58.52;MQ0=6;MQRankSum=-5.772;QD=14.90;ReadPosRankSum=1.032;VQSLOD=2.4884;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:62.62:0,63,908	1/1:6,0:6:11.16:80,11,0	0/0:7,0:5:1.12:0,1,41	0/1:7,0:2:4.83:5,0,5	0/0:9,0:9:21.05:0,21,316	0/0:17,0:17:11.41:0,11,163	0/0:27,0:26:35.71:0,36,169	1/1:10,0:8:17.86:132,18,0	0/0:18,0:18:38.28:0,38,573	1/1:13,6:19:51.02:559,51,0	1/1:1,4:5:3.01:42,3,0	0/0:19,0:19:12.71:0,13,110	0/0:20,0:20:18.90:0,19,90	1/1:5,9:14:18.05:214,18,0	1/1:6,7:13:11.62:112,12,0	0/0:17,0:17:29.87:0,30,458	1/1:21,0:21:34.37:254,34,0	0/0:22,0:22:27.99:0,28,579	1/1:14,2:13:32.91:307,33,0	1/1:9,4:13:23.93:210,24,0	1/1:22,7:29:20.98:219,21,0	0/0:12,0:12:8.34:0,8,55	0/0:17,0:16:20.27:0,20,109	0/0:32,0:31:49.98:0,50,301	1/1:9,4:12:18.02:199,18,0	1/1:15,2:17:47.96:457,48,0	1/1:5,10:15:21.03:242,21,0	1/1:2,7:9:21.05:271,21,0
chr10	59254633	.	GTTGTTTTGTTTTGTTTTGTTTTGTT	G	6335.97	PASS	AB=0.738;AC=24;AF=0.429;AN=56;BaseQRankSum=10.549;DP=526;FS=33.078;HRun=0;HaplotypeScore=321.3027;InbreedingCoeff=0.7632;MQ=54.01;MQ0=12;MQRankSum=-4.770;QD=28.67;ReadPosRankSum=-1.362;VQSLOD=2.2109;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:72.23:0,72,6277	1/1:5,6:11:12.04:471,12,0	0/0:20,0:13:12.04:0,12,619	0/0:15,0:12:15.05:0,15,495	0/0:16,0:16:45.15:0,45,4430	0/0:12,0:18:36.12:0,36,3018	0/0:19,0:22:27.09:0,27,2413	0/1:19,10:26:99:360,0,159	0/0:20,0:20:48.15:0,48,4042	1/1:13,13:26:35.91:971,36,0	1/1:6,10:15:15.05:430,15,0	0/0:22,0:26:51.18:0,51,4624	0/0:4,0:15:21.54:0,22,2160	1/1:10,2:12:5.51:391,6,0	1/1:5,7:12:15.05:827,15,0	0/0:11,0:11:15.05:0,15,1536	0/0:10,0:8:6.02:0,6,493	0/0:23,0:23:51.18:0,51,5041	1/1:19,0:14:2.98:22,3,0	1/1:7,9:16:9.69:535,10,0	0/1:14,8:22:0.54:107,0,1	0/0:8,0:13:24.08:0,24,2196	0/0:16,0:21:54.19:0,54,5297	0/0:15,0:35:60.21:0,60,5622	1/1:8,7:15:3.01:44,3,0	1/1:16,11:27:27.98:1309,28,0	1/1:3,7:10:12.04:631,12,0	1/1:5,1:6:6.02:238,6,0
chr10	59254656	.	GTT	G	1776	PASS	AB=0.800;AC=22;AF=0.393;AN=56;BaseQRankSum=10.503;DP=381;FS=16.858;HRun=4;HaplotypeScore=89.8936;InbreedingCoeff=0.7398;MQ=56.17;MQ0=14;MQRankSum=-5.556;QD=17.24;ReadPosRankSum=-1.434;VQSLOD=-0.1032;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:90.31:0,90,1531	1/1:6,0:6:11.82:110,12,0	0/0:17,0:9:27.04:0,27,342	0/0:14,0:9:21.64:0,22,211	0/0:18,0:18:51.17:0,51,908	0/0:19,0:19:45.15:0,45,687	0/0:19,0:19:51.17:0,51,811	0/1:14,0:11:23.47:267,0,23	0/0:18,0:18:51.16:0,51,866	1/1:13,0:13:35.63:431,36,0	1/1:10,0:10:11.93:140,12,0	0/0:19,0:19:57.13:0,57,820	0/0:15,0:15:27.09:0,27,382	1/1:2,1:3:8.82:75,9,0	1/1:7,0:7:14.62:106,15,0	0/0:7,0:7:21.07:0,21,372	0/1:4,8:10:79.51:227,0,80	0/0:20,0:20:57.18:0,57,980	0/0:7,0:2:0:0,0,0	1/1:9,0:9:12.02:158,12,0	0/0:8,0:8:0:0,0,0	0/0:12,0:12:33.11:0,33,527	0/0:21,0:20:60.20:0,60,981	0/0:32,0:31:72.22:0,72,971	1/1:7,0:7:3.01:44,3,0	1/1:11,0:11:26.45:226,26,0	1/1:7,0:7:11.72:91,12,0	1/1:2,2:4:8.92:104,9,0
chr10	59256618	.	T	TG	13897.95	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=0.425;DP=558;FS=11.514;HRun=2;HaplotypeScore=67.6085;InbreedingCoeff=0.9842;MQ=87.99;MQ0=0;MQRankSum=-0.419;QD=37.56;ReadPosRankSum=2.100;VQSLOD=4.8435;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,36:36:99:1391,102,0	1/1:0,8:8:24.01:301,24,0	0/0:20,0:20:50.35:0,50,646	0/0:24,0:24:68.96:0,69,784	1/1:1,19:20:54.11:751,54,0	0/0:21,0:20:51.12:0,51,613	0/0:26,0:26:75.17:0,75,897	1/1:4,23:27:69.19:939,69,0	1/1:0,20:20:57.19:820,57,0	1/1:0,10:10:30.10:430,30,0	1/1:1,6:7:18.06:259,18,0	0/0:23,0:23:60.19:0,60,743	0/0:17,0:17:45.14:0,45,557	1/1:0,20:20:57.08:772,57,0	1/1:3,25:28:66.18:925,66,0	1/1:1,24:25:57.16:796,57,0	1/1:0,25:25:66.19:928,66,0	1/1:0,20:20:54.18:773,54,0	1/1:0,20:20:60.16:804,60,0	1/1:2,14:16:7.91:534,8,0	1/1:1,28:29:72.24:1037,72,0	0/0:15,0:15:16.12:0,16,394	0/0:8,0:8:24.05:0,24,274	0/0:34,0:34:97.67:0,98,1193	1/1:0,9:9:27.09:388,27,0	1/1:0,23:23:69.20:971,69,0	1/1:1,18:19:50.72:733,51,0	1/1:0,8:8:24.08:346,24,0
chr10	59257084	.	AT	A	20398.92	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=4.006;DP=700;FS=19.507;HRun=1;HaplotypeScore=79.2705;InbreedingCoeff=0.9999;MQ=87.48;MQ0=0;MQRankSum=-4.076;QD=38.56;ReadPosRankSum=5.062;VQSLOD=3.0138;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,105,1644	1/1:0,19:19:54.18:755,54,0	0/0:24,0:24:41.89:0,42,903	0/0:22,0:22:52.73:0,53,715	0/0:23,0:23:69.20:0,69,1055	1/1:0,19:19:51.17:713,51,0	1/1:0,18:18:48.16:671,48,0	1/1:0,26:26:78.21:1010,78,0	0/0:34,0:34:99:0,102,1550	1/1:0,43:43:99:1803,129,0	1/1:0,22:22:60.16:816,60,0	1/1:0,21:21:63.21:881,63,0	1/1:0,23:23:60.20:838,60,0	1/1:0,16:16:45.15:629,45,0	1/1:0,26:26:66.22:923,66,0	0/0:22,0:22:66.18:0,66,985	1/1:0,24:24:66.22:922,66,0	0/0:11,0:11:33.04:0,33,471	1/1:0,22:22:66.20:892,66,0	1/1:0,35:35:99:1358,102,0	1/1:0,29:29:84.28:1173,84,0	1/1:0,35:35:99:1360,99,0	1/1:0,22:22:57.19:797,57,0	1/1:0,36:36:96.32:1342,96,0	1/1:0,23:23:63.21:881,63,0	1/1:0,25:25:75.18:959,75,0	1/1:0,31:31:81.27:1132,81,0	1/1:0,14:14:39.13:545,39,0
chr10	59258142	.	CA	C	2438.08	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=15.295;DP=670;FS=0.769;HRun=1;HaplotypeScore=93.0805;InbreedingCoeff=0.9989;MQ=64.19;MQ0=0;MQRankSum=-1.737;QD=17.67;ReadPosRankSum=1.193;VQSLOD=3.9413;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,28:42:99:938,116,0	0/0:13,0:13:33.06:0,33,455	0/0:13,0:11:33.06:0,33,443	0/0:18,0:16:48.05:0,48,606	1/1:17,15:32:59.78:440,60,0	0/0:33,0:33:96.27:0,96,1345	0/0:22,0:22:58.62:0,59,746	0/0:37,0:37:99:0,111,1561	1/1:12,9:21:42:300,42,0	0/0:26,0:26:72.14:0,72,953	0/0:15,0:15:45.11:0,45,599	0/0:20,0:20:57.17:0,57,805	0/0:17,0:17:51.10:0,51,681	0/0:14,0:14:39.11:0,39,551	0/0:20,0:20:60.14:0,60,813	1/1:10,11:21:57.39:466,57,0	0/0:37,0:37:99:0,111,1582	1/1:7,15:22:58.78:470,59,0	0/0:26,0:26:78.19:0,78,1021	0/0:22,0:22:66.21:0,66,945	0/0:33,0:33:96.26:0,96,1341	0/0:21,0:21:63.05:0,63,801	0/0:29,0:29:87.25:0,87,1222	0/0:36,0:36:99:0,108,1528	0/0:26,0:26:75.23:0,75,1058	0/0:22,0:22:66.22:0,66,963	0/0:25,0:25:75.19:0,75,1022	0/0:7,0:7:21.05:0,21,287
chr10	59258143	.	AC	A	656.41	PASS	AB=0.900;AC=8;AF=0.143;AN=56;BaseQRankSum=14.133;DP=668;FS=0.432;HRun=4;HaplotypeScore=97.5122;InbreedingCoeff=0.7091;MQ=64.91;MQ0=0;MQRankSum=1.156;QD=4.72;ReadPosRankSum=1.268;VQSLOD=-0.1676;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:41,2:43:33.24:271,33,0	0/0:13,0:13:33.05:0,33,441	0/0:14,0:12:27.09:0,27,372	0/0:18,0:16:44.83:0,45,520	0/1:24,8:32:16.31:126,0,16	0/0:34,0:34:99:0,99,1339	0/0:22,0:22:51.64:0,52,707	0/0:38,0:38:99:0,105,1434	0/1:21,0:21:18.75:91,0,19	0/0:26,0:26:66.22:0,66,916	0/0:15,0:15:42.14:0,42,582	0/0:19,0:19:57.19:0,57,787	0/0:16,0:16:48.16:0,48,651	0/0:13,0:13:39.13:0,39,539	0/0:20,0:20:54.17:0,54,735	1/1:17,4:21:31.76:229,32,0	0/0:38,0:38:99:0,108,1482	1/1:22,0:22:17.16:93,17,0	0/0:24,0:24:69.23:0,69,940	0/0:22,0:22:66.22:0,66,913	0/0:32,0:32:93.30:0,93,1258	0/0:19,0:19:54.16:0,54,722	0/0:29,0:29:81.27:0,81,1124	0/0:37,0:37:99:0,111,1511	0/0:26,0:26:72.24:0,72,1007	0/0:22,0:22:66.22:0,66,918	0/0:25,0:25:69.22:0,69,943	0/0:7,0:7:18.06:0,18,252
chr10	59258146	.	C	CACA	4784.06	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=13.913;DP=666;FS=0.396;HRun=0;HaplotypeScore=115.0233;InbreedingCoeff=0.9961;MQ=64.23;MQ0=0;MQRankSum=-0.966;QD=34.67;ReadPosRankSum=1.542;VQSLOD=5.0485;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:16,28:44:85.46:1725,85,0	0/0:13,0:13:33.09:0,33,581	0/0:14,0:12:30.08:0,30,457	0/0:17,0:15:18.37:0,18,605	1/1:15,16:31:31.65:879,32,0	0/0:33,0:33:99:0,99,1728	0/0:20,0:20:54.64:0,55,925	0/0:41,0:41:99:0,111,1872	1/1:10,9:19:34.51:541,35,0	0/0:27,0:27:75.23:0,75,1239	0/0:15,0:15:45.15:0,45,792	0/0:19,0:19:57.19:0,57,1008	0/0:16,0:16:48.16:0,48,807	0/0:14,0:14:42.13:0,42,717	0/0:19,0:19:54.17:0,54,941	1/1:9,11:20:47.64:809,48,0	0/0:37,0:37:99:0,111,1974	1/1:9,15:24:53.16:830,53,0	0/0:23,0:23:68.97:0,69,1171	0/0:24,0:24:69.22:0,69,1204	0/0:32,0:32:96.30:0,96,1588	0/0:18,0:18:54.17:0,54,955	0/0:30,0:30:87.26:0,87,1505	0/0:38,0:38:99:0,114,1987	0/0:25,0:25:72.25:0,72,1324	0/0:23,0:23:69.23:0,69,1224	0/0:24,0:24:72.22:0,72,1255	0/0:6,0:6:18.06:0,18,335
chr10	59258156	.	A	ACA	4199.04	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=14.217;DP=653;FS=0.847;HRun=0;HaplotypeScore=96.8460;InbreedingCoeff=0.9882;MQ=63.42;MQ0=0;MQRankSum=-1.424;QD=31.34;ReadPosRankSum=-0.014;VQSLOD=5.5711;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:42,0:43:99:1505,101,0	0/0:15,0:15:30.10:0,30,381	0/0:11,0:8:15.03:0,15,188	0/0:14,0:14:12.99:0,13,263	1/1:28,0:30:52.09:783,52,0	0/0:30,0:30:81.23:0,81,1003	0/0:21,0:21:48.10:0,48,580	0/0:39,0:39:87.25:0,87,1064	1/1:16,5:22:38.23:534,38,0	0/0:28,0:28:63.16:0,63,749	0/0:16,0:16:42.13:0,42,522	0/0:17,0:17:48.13:0,48,594	0/0:14,0:14:33.09:0,33,406	0/0:13,0:13:36.10:0,36,444	0/0:21,0:21:45.14:0,45,572	1/1:19,0:19:47.98:662,48,0	0/0:38,0:38:99:0,102,1268	1/1:20,0:20:45.14:715,45,0	0/0:20,0:20:27.46:0,27,634	0/0:24,0:24:60.17:0,60,737	0/0:26,0:26:69.19:0,69,849	0/0:20,0:20:48.15:0,48,610	0/0:31,0:31:78.19:0,78,936	0/0:36,0:36:99:0,99,1216	0/0:25,0:25:69.22:0,69,878	0/0:26,0:26:63.19:0,63,790	0/0:25,0:25:66.20:0,66,825	0/0:8,0:8:18.06:0,18,229
chr10	59258641	.	A	AAAAC	11592.50	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=7.706;DP=694;FS=6.140;HRun=0;HaplotypeScore=154.8090;InbreedingCoeff=0.9943;MQ=65.85;MQ0=3;MQRankSum=-11.159;QD=37.27;ReadPosRankSum=-1.690;VQSLOD=3.9903;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:37:34.85:833,35,0	0/0:2,0:12:30.03:0,30,280	0/0:24,0:22:32.59:0,33,474	0/0:25,0:22:14.56:0,15,232	1/1:17,1:26:39.13:677,39,0	1/1:10,15:24:57.19:1322,57,0	1/1:21,13:34:63.16:1302,63,0	0/0:16,0:25:23.87:0,24,204	1/1:11,1:24:54.18:958,54,0	0/0:27,0:27:60.19:0,60,940	0/0:21,0:21:45.14:0,45,706	1/1:11,14:24:60.20:1343,60,0	1/1:9,10:19:36.12:841,36,0	0/0:30,0:30:66.21:0,66,1057	0/0:25,0:25:54.15:0,54,856	1/1:10,0:24:48.16:822,48,0	0/0:9,0:23:39.79:0,40,334	1/1:23,0:27:15.85:425,16,0	0/0:18,0:18:24.07:0,24,360	0/0:34,0:34:63.21:0,63,1023	0/0:30,0:30:63.17:0,63,950	1/1:14,15:29:54.18:1312,54,0	1/1:12,9:21:39.11:881,39,0	1/1:8,12:18:39.13:874,39,0	0/0:21,0:21:39.13:0,39,639	0/0:33,0:33:72.25:0,72,1163	0/0:28,0:28:66.17:0,66,1030	0/0:7,0:7:21.07:0,21,344
chr10	59258672	.	TA	T	6527.67	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=15.533;DP=649;FS=3.205;HRun=9;HaplotypeScore=122.1269;InbreedingCoeff=0.9934;MQ=61.21;MQ0=1;MQRankSum=-9.801;QD=19.66;ReadPosRankSum=-0.130;VQSLOD=3.7838;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,29:35:77.90:694,78,0	1/1:2,10:12:27.01:247,27,0	0/0:26,1:22:42.63:0,43,495	0/0:14,0:12:17.96:0,18,206	1/1:2,26:28:65.99:603,66,0	1/1:4,22:26:63.01:572,63,0	1/1:6,22:28:66.02:604,66,0	1/1:8,16:24:48.01:438,48,0	1/1:7,15:22:44.95:401,45,0	0/0:27,1:28:47.75:0,48,804	0/0:24,0:24:66.19:0,66,758	1/1:3,17:20:48.02:439,48,0	1/1:2,14:16:42.01:384,42,0	0/0:24,0:24:69.21:0,69,796	0/0:18,0:18:45.13:0,45,519	1/1:6,13:19:36:329,36,0	1/1:6,14:20:30:274,30,0	1/1:2,17:19:47.77:424,48,0	0/0:29,1:30:47.75:0,48,803	0/0:34,0:34:81.23:0,81,925	0/0:23,0:23:60.18:0,60,692	1/1:3,23:26:57.01:520,57,0	1/1:2,18:20:45.01:411,45,0	1/1:6,11:17:20.39:186,20,0	0/0:15,0:15:42.12:0,42,484	0/0:33,0:33:90.26:0,90,1031	0/0:34,0:34:96.23:0,96,1082	0/0:12,1:13:11.65:0,12,388
chr10	59259163	.	G	GTA	2093.12	PASS	AB=1.000;AC=12;AF=0.214;AN=56;BaseQRankSum=2.741;DP=524;FS=1.206;HRun=0;HaplotypeScore=76.4270;InbreedingCoeff=0.7100;MQ=50.58;MQ0=18;MQRankSum=1.287;QD=18.36;ReadPosRankSum=7.896;VQSLOD=3.3564;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,22:26:20.44:555,20,0	0/1:11,0:11:35.02:35,0,141	0/0:28,0:8:15.08:0,15,190	0/0:35,0:11:13.70:0,14,147	1/1:2,9:11:4.42:273,4,0	0/0:25,0:24:39.01:0,39,624	0/0:19,0:19:35.97:0,36,355	0/0:24,0:22:62.69:0,63,525	1/1:1,20:21:40.87:709,41,0	0/0:22,0:21:49.46:0,49,336	0/0:13,0:12:4.25:0,4,87	0/0:14,0:14:33.02:0,33,412	0/0:11,0:11:29.87:0,30,310	0/0:14,0:13:4.86:0,5,81	0/1:10,0:9:0.65:1,0,40	1/1:4,15:16:24.08:459,24,0	0/0:13,0:13:9.89:0,10,229	1/1:2,13:13:11.39:229,11,0	0/0:16,0:16:41.51:0,42,297	0/0:12,0:11:17.90:0,18,140	0/0:22,0:20:7.83:0,8,135	0/0:21,0:21:45.01:0,45,509	0/0:20,0:20:56.61:0,57,583	0/0:26,0:26:65.71:0,66,759	0/0:14,0:14:17.98:0,18,149	0/0:23,0:22:44.11:0,44,338	0/0:20,0:19:47.09:0,47,334	0/0:18,0:18:35.03:0,35,274
chr10	59259378	.	G	GTATTTATTTATTTATT	2500.76	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=0.047;DP=342;FS=6.963;HRun=0;HaplotypeScore=239.4239;InbreedingCoeff=0.8326;MQ=64.42;MQ0=1;MQRankSum=-4.458;QD=56.84;ReadPosRankSum=-1.768;VQSLOD=1.7090;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,0:10:11.21:450,11,0	0/0:4,0:4:9.03:0,9,248	0/0:17,0:17:33.07:0,33,938	0/0:13,0:10:18.53:0,19,612	1/1:14,3:17:15.05:996,15,0	0/0:16,0:16:36.12:0,36,1218	0/0:4,0:4:6.02:0,6,268	0/0:30,0:30:57.19:0,57,2107	1/1:5,2:7:6.02:459,6,0	0/0:17,0:17:36.11:0,36,1496	0/0:10,0:10:21.03:0,21,469	0/0:18,0:18:24.08:0,24,761	0/0:12,0:12:24.08:0,24,668	0/0:11,0:11:27.08:0,27,700	0/0:11,0:10:12.04:0,12,204	1/1:3,1:4:6.02:270,6,0	0/0:10,0:10:18.06:0,18,494	1/1:5,1:6:8.14:479,8,0	0/0:14,0:14:24.08:0,24,830	0/0:14,0:14:20.30:0,20,428	0/0:7,0:7:6.02:0,6,189	0/0:15,0:15:25.33:0,25,503	0/0:10,0:10:12.04:0,12,371	0/0:7,0:7:12.04:0,12,298	0/0:13,0:13:27.09:0,27,954	0/0:16,0:16:39.13:0,39,1583	0/0:13,0:13:30.10:0,30,1071	0/0:16,0:16:39.10:0,39,1405
chr10	59259401	.	T	TAC	2316.51	PASS	AB=0.791;AC=20;AF=0.370;AN=54;BaseQRankSum=-8.843;DP=347;FS=0.000;HRun=0;HaplotypeScore=96.8662;InbreedingCoeff=0.5260;MQ=49.82;MQ0=4;MQRankSum=6.654;QD=13.09;ReadPosRankSum=0.403;VQSLOD=3.1891;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:3,0:9:11.12:0,11,56	0/0:2,0:3:2.84:0,3,14	./.	0/0:13,0:8:2.99:0,3,24	0/0:5,0:8:8.52:0,9,42	0/0:5,0:15:19.89:0,20,97	0/0:2,0:4:5.68:0,6,28	0/0:20,0:28:8.52:0,9,42	0/0:2,0:4:5.68:0,6,28	1/1:8,11:19:30.09:432,30,0	0/1:8,4:12:24.34:82,0,24	0/0:6,0:19:31.25:0,31,153	0/0:4,0:9:11.36:0,11,56	0/1:11,4:15:12.39:219,0,12	1/1:4,5:9:12.03:162,12,0	0/0:2,0:6:14.20:0,14,70	0/1:9,0:12:1.04:1,0,20	0/0:2,0:5:6.15:0,6,29	1/1:7,6:13:18.02:244,18,0	0/1:6,9:15:21.33:124,0,21	1/1:4,10:14:21.07:318,21,0	0/0:8,0:14:17.04:0,17,84	0/0:4,0:10:14.20:0,14,70	0/0:5,0:9:5.68:0,6,28	1/1:9,1:10:9.03:131,9,0	1/1:11,6:17:4.10:164,4,0	1/1:11,9:20:8.05:218,8,0	1/1:8,11:20:27.56:406,28,0
chr10	59259542	.	CCA	C	3214.20	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=9.651;DP=588;FS=3.582;HRun=0;HaplotypeScore=76.4741;InbreedingCoeff=0.9994;MQ=81.69;MQ0=0;MQRankSum=-1.045;QD=41.74;ReadPosRankSum=0.806;VQSLOD=5.2302;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,19:19:48.16:782,48,0	0/0:16,0:16:48.16:0,48,964	0/0:22,0:21:63.21:0,63,1219	0/0:20,0:20:55.71:0,56,978	1/1:0,21:21:63.21:1007,63,0	0/0:31,0:31:93.32:0,93,1887	0/0:15,0:15:45.15:0,45,913	0/0:44,0:44:99:0,126,2558	1/1:0,12:12:36.12:587,36,0	0/0:27,0:27:81.28:0,81,1644	0/0:17,0:17:51.17:0,51,1016	0/0:25,0:25:75.26:0,75,1516	0/0:18,0:18:51.18:0,51,1035	0/0:11,0:11:33.11:0,33,670	0/0:23,0:23:69.24:0,69,1400	1/1:0,10:10:24.08:391,24,0	0/0:23,0:23:66.23:0,66,1336	1/1:0,15:15:39.13:622,39,0	0/0:23,0:23:66.23:0,66,1304	0/0:28,0:28:84.29:0,84,1706	0/0:22,0:22:66.21:0,66,1286	0/0:16,0:16:45.15:0,45,914	0/0:23,0:23:69.24:0,69,1383	0/0:16,0:16:48.16:0,48,973	0/0:20,0:20:56.99:0,57,1141	0/0:21,0:21:63.22:0,63,1278	0/0:30,0:30:86.91:0,87,1688	0/0:20,0:20:54.19:0,54,1097
chr10	59259712	.	C	CCT	2440.50	PASS	AB=0.586;AC=9;AF=0.161;AN=56;BaseQRankSum=-6.417;DP=691;FS=0.000;HRun=0;HaplotypeScore=100.8949;InbreedingCoeff=0.8309;MQ=85.54;MQ0=5;MQRankSum=-0.173;QD=24.41;ReadPosRankSum=3.885;VQSLOD=4.0626;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,27:35:63.21:1017,63,0	0/0:7,0:7:18.05:0,18,217	0/0:54,0:41:11.08:0,11,364	0/0:60,0:44:64.13:0,64,636	1/1:2,11:13:8.78:145,9,0	0/0:30,0:34:75.04:0,75,863	0/0:25,0:26:71.88:0,72,828	0/0:37,0:36:59.46:0,59,724	1/1:3,15:18:30.10:484,30,0	0/0:22,0:22:54.16:0,54,646	0/0:15,0:15:35.85:0,36,436	0/0:18,0:18:51.14:0,51,607	0/0:16,0:16:36.09:0,36,413	0/0:6,0:6:12.04:0,12,146	0/0:20,0:20:54.15:0,54,643	1/1:2,14:17:33.11:532,33,0	0/0:35,0:35:84.24:0,84,1006	0/1:5,11:17:34.94:424,0,35	0/0:16,0:15:17.45:0,17,173	0/0:27,0:28:63:0,63,718	0/0:27,0:29:69:0,69,775	0/0:22,0:22:51.14:0,51,605	0/0:20,0:20:51.06:0,51,570	0/0:28,0:28:65.98:0,66,751	0/0:16,0:17:38.94:0,39,441	0/0:24,0:24:60.12:0,60,691	0/0:21,0:24:56.79:0,57,608	0/0:32,0:32:60.12:0,60,692
chr10	59260016	.	G	GT	2932.85	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=6.149;DP=562;FS=28.367;HRun=1;HaplotypeScore=62.6433;InbreedingCoeff=0.9975;MQ=89.11;MQ0=0;MQRankSum=-2.596;QD=40.18;ReadPosRankSum=2.276;VQSLOD=1.5819;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,23:24:69.23:1025,69,0	0/0:6,0:6:18.02:0,18,214	0/0:25,0:25:65.31:0,65,817	0/0:19,0:19:45.30:0,45,497	1/1:2,15:18:48.16:709,48,0	0/0:34,0:34:99:0,102,1280	0/0:24,0:24:72.16:0,72,869	0/0:32,0:32:87.24:0,87,1058	1/1:1,7:8:24.08:342,24,0	0/0:19,0:19:54.18:0,54,700	0/0:16,0:16:48.11:0,48,598	0/0:14,0:14:42.11:0,42,527	0/0:20,0:20:60.17:0,60,761	0/0:17,0:17:51.12:0,51,628	0/0:21,0:21:57.17:0,57,724	1/1:0,10:10:30.10:449,30,0	0/0:23,0:23:69.18:0,69,850	1/1:0,13:13:39.13:583,39,0	0/0:24,0:24:72.22:0,72,910	0/0:26,0:26:72.23:0,72,930	0/0:28,0:28:84.24:0,84,1046	0/0:17,0:17:48.13:0,48,595	0/0:22,0:22:66.19:0,66,811	0/0:19,0:19:57.17:0,57,725	0/0:18,0:18:54.17:0,54,688	0/0:17,0:17:51.16:0,51,656	0/0:32,0:32:96.21:0,96,1164	0/0:16,0:16:48.16:0,48,622
chr10	59260333	.	A	AAAG	633.39	PASS	AB=1.000;AC=12;AF=0.214;AN=56;BaseQRankSum=2.377;DP=515;FS=17.792;HRun=0;HaplotypeScore=85.2383;InbreedingCoeff=0.0934;MQ=44.66;MQ0=57;MQRankSum=-1.096;QD=3.44;ReadPosRankSum=3.850;VQSLOD=0.2852;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:26:73.06:86,0,73	0/0:7,0:7:17.93:0,18,186	0/0:14,0:7:17.89:0,18,175	0/0:9,0:3:3:0,3,34	0/1:18,0:17:40.55:55,0,41	0/1:25,0:22:50.72:51,0,71	0/1:10,0:10:3.22:3,0,97	0/0:27,0:26:59.04:0,59,701	0/1:16,0:14:21.60:22,0,75	0/0:27,0:25:57.75:0,58,531	0/0:20,0:18:40.22:0,40,404	0/1:21,0:16:9.97:29,0,10	0/0:9,0:6:7.51:0,8,39	0/0:23,0:21:41.74:0,42,418	0/0:14,0:12:26.86:0,27,233	1/1:2,8:9:18.32:400,18,0	0/0:35,0:31:65.92:0,66,806	0/1:28,0:23:53.43:53,0,133	0/0:24,0:19:56.42:0,56,575	0/0:30,0:27:61.92:0,62,540	0/0:9,0:7:11.90:0,12,121	0/0:4,0:4:2.96:0,3,19	0/1:12,0:9:33.03:33,0,59	1/1:14,0:11:4.79:54,5,0	0/0:18,0:14:32.80:0,33,314	0/0:26,0:25:64.43:0,64,615	0/0:25,0:23:16.42:0,16,473	0/0:10,0:9:23.96:0,24,253
chr10	59261648	.	A	AT	3564.95	PASS	AB=0.756;AC=38;AF=0.679;AN=56;BaseQRankSum=0.051;DP=484;FS=1.164;HRun=15;HaplotypeScore=74.0358;InbreedingCoeff=-0.0334;MQ=66.42;MQ0=11;MQRankSum=-2.016;QD=8.10;ReadPosRankSum=-1.440;VQSLOD=2.5235;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:19,7:28:8.46:218,8,0	0/1:2,3:5:14.12:61,0,14	0/0:18,0:13:6.94:0,7,39	0/1:11,0:9:0.50:0,0,13	1/1:14,15:29:23.81:289,24,0	1/1:4,8:12:2.96:133,3,0	0/1:8,6:13:21.05:58,0,21	0/1:12,10:23:4.05:191,0,4	1/1:8,14:22:11.46:293,11,0	0/1:10,6:16:10.39:122,0,10	0/1:7,6:15:16.13:105,0,16	0/1:7,6:15:7.02:73,0,7	0/1:6,3:9:1.19:73,0,1	0/1:5,7:12:9.02:41,0,9	1/1:5,6:12:2.95:127,3,0	1/1:12,7:17:17.78:134,18,0	1/1:22,10:30:8.64:370,9,0	0/1:18,10:27:31.15:177,0,31	0/1:21,1:22:18.08:78,0,18	1/1:7,6:14:4.11:107,4,0	0/1:7,1:9:16.33:16,0,27	1/1:10,8:18:8.35:191,8,0	0/0:13,0:12:17.43:0,17,107	0/0:11,1:13:0.37:0,0,106	1/1:5,9:15:5.08:171,5,0	1/1:10,10:20:11.94:204,12,0	1/1:12,10:23:14.77:211,15,0	1/1:4,6:10:14.95:120,15,0
chr10	59263503	.	AGGT	A	15494.23	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=5.830;DP=672;FS=9.012;HRun=0;HaplotypeScore=109.0047;InbreedingCoeff=0.9955;MQ=79.45;MQ0=0;MQRankSum=-6.226;QD=46.25;ReadPosRankSum=2.953;VQSLOD=7.0039;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,138,3131	1/1:1,6:7:12.04:212,12,0	0/0:22,0:22:52.24:0,52,1313	0/0:13,0:13:33.09:0,33,664	0/0:21,0:21:60.21:0,60,1385	0/0:19,0:19:54.19:0,54,1276	0/0:25,0:25:72.23:0,72,1629	1/1:1,28:29:78.22:1307,78,0	0/0:25,0:25:75.26:0,75,1769	1/1:0,17:17:51.15:843,51,0	1/1:1,23:24:63.21:1094,63,0	0/0:29,0:29:87.30:0,87,2009	0/0:28,0:28:83.86:0,84,1796	1/1:0,23:23:57.19:989,57,0	1/1:0,22:22:48.16:846,48,0	1/1:0,15:15:45.15:793,45,0	1/1:0,25:25:72.24:1268,72,0	0/0:19,0:19:54.19:0,54,1275	1/1:0,27:27:81.19:1328,81,0	1/1:1,20:21:63.21:1065,63,0	1/1:0,44:44:99:2046,117,0	0/0:29,0:29:84.27:0,84,1922	0/0:31,0:31:90.31:0,90,2086	0/0:30,0:30:90.29:0,90,2075	1/1:0,21:21:57.20:1003,57,0	1/1:0,27:27:78.23:1292,78,0	1/1:0,19:19:57.19:987,57,0	1/1:0,14:14:24.08:421,24,0
chr10	59265526	.	T	TACAC	1147.42	PASS	AB=0.872;AC=31;AF=0.596;AN=52;BaseQRankSum=-1.492;DP=577;FS=1.711;HRun=0;HaplotypeScore=112.3424;InbreedingCoeff=0.4654;MQ=66.90;MQ0=6;MQRankSum=1.644;QD=2.92;ReadPosRankSum=-3.103;VQSLOD=1.2803;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:24:3:0,3,28	0/0:4,0:6:12.01:0,12,122	./.	./.	0/0:11,0:10:0:0,0,0	1/1:17,2:29:12.66:214,13,0	1/1:19,2:25:9.13:150,9,0	1/1:22,0:22:2.66:5,3,0	0/0:7,0:13:15.89:0,16,137	1/1:26,0:26:9.83:66,10,0	1/1:13,0:20:8.23:37,8,0	1/1:8,4:15:6.14:83,6,0	1/1:14,7:24:3.01:71,3,0	0/1:18,0:18:0.88:1,0,2	1/1:12,0:21:13.72:61,14,0	0/0:21,0:26:36.49:0,36,376	0/0:19,0:19:24.07:0,24,353	0/0:10,0:15:12:0,12,108	1/1:14,0:17:14.71:99,15,0	0/0:11,0:11:9.03:0,9,133	0/1:38,0:38:7.52:8,0,83	1/1:11,2:17:5.45:80,5,0	1/1:10,1:12:5.75:83,6,0	0/1:18,7:28:37.46:132,0,37	1/1:14,0:25:8.50:77,8,0	0/1:22,0:22:22.21:97,0,22	1/1:11,0:14:7.52:36,8,0	0/1:6,0:14:1.45:16,0,1
chr10	59265603	.	G	GTGAA	1962.24	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-7.307;DP=592;FS=2.150;HRun=0;HaplotypeScore=98.0030;InbreedingCoeff=0.9801;MQ=56.14;MQ0=1;MQRankSum=1.432;QD=25.16;ReadPosRankSum=-0.426;VQSLOD=3.2733;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:90.18:0,90,1285	1/1:1,5:8:11.96:236,12,0	0/0:23,0:14:24:0,24,282	0/0:21,0:17:13.96:0,14,175	0/0:21,0:21:60.17:0,60,913	0/0:22,0:22:48.14:0,48,753	0/0:21,0:21:45.11:0,45,637	1/1:27,0:27:42.06:574,42,0	0/0:21,0:21:39.12:0,39,608	0/0:21,0:20:42.13:0,42,658	0/0:12,0:12:27.08:0,27,412	0/0:20,0:20:57.17:0,57,874	0/0:26,0:26:69.17:0,69,1009	0/0:20,0:20:51.09:0,51,729	0/0:26,0:26:75.21:0,75,1125	1/1:8,19:27:27.09:659,27,0	1/1:3,13:16:27.09:651,27,0	0/0:13,0:13:24.08:0,24,391	0/0:28,0:27:39.04:0,39,558	0/0:11,0:11:27.08:0,27,403	0/0:26,0:26:51.14:0,51,779	0/0:18,0:18:39.12:0,39,607	0/0:23,0:23:63.11:0,63,858	0/0:25,0:25:51.14:0,51,765	0/0:23,0:23:60.17:0,60,917	0/0:16,0:16:36.11:0,36,565	0/0:20,0:20:54.14:0,54,843	0/0:20,0:20:16.57:0,17,378
chr10	59265817	.	G	GGATAGATA	12099.71	PASS	AC=42;AF=0.808;AN=52;BaseQRankSum=-7.850;DP=689;FS=0.000;HRun=0;HaplotypeScore=196.8276;InbreedingCoeff=0.8495;MQ=55.64;MQ0=1;MQRankSum=-0.823;QD=22.96;ReadPosRankSum=-4.318;VQSLOD=3.3010;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:48:33.10:0,33,461	0/0:7,0:7:17.09:0,17,377	./.	./.	0/0:9,0:23:9.14:0,9,206	1/1:11,8:24:24.08:973,24,0	1/1:16,0:16:9.03:246,9,0	1/1:33,0:33:12.01:160,12,0	0/0:10,0:25:33.11:0,33,536	1/1:15,3:26:27.05:629,27,0	1/1:12,9:26:18.06:729,18,0	1/1:15,3:20:9.03:359,9,0	1/1:23,0:32:6.02:208,6,0	1/1:17,1:26:21.07:728,21,0	1/1:11,11:26:30.09:1119,30,0	1/1:24,0:24:21:317,21,0	1/1:9,0:26:32.92:268,33,0	0/0:17,0:23:33.06:0,33,640	1/1:16,4:22:21.03:574,21,0	1/1:4,8:19:21.07:850,21,0	1/1:18,0:22:2.99:24,3,0	1/1:15,8:25:18.06:730,18,0	1/1:12,1:22:9.03:312,9,0	1/1:21,0:21:12.04:278,12,0	1/1:15,14:40:42.13:1607,42,0	1/1:13,1:32:63.44:893,63,0	1/1:19,9:33:18.06:730,18,0	1/1:4,3:9:9.03:365,9,0
chr10	59266883	.	ACAGG	A	14592.44	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=14.873;DP=601;FS=22.220;HRun=0;HaplotypeScore=107.0899;InbreedingCoeff=0.9972;MQ=86.53;MQ0=0;MQRankSum=-5.287;QD=46.92;ReadPosRankSum=2.765;VQSLOD=3.4763;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,117,3068	1/1:1,13:14:36.12:683,36,0	0/0:24,0:24:66.23:0,66,1748	0/0:29,0:29:78.66:0,79,1919	0/0:12,0:12:33.11:0,33,891	0/0:12,0:12:33.11:0,33,880	0/0:31,0:31:87.26:0,87,2276	1/1:2,19:21:57.20:1073,57,0	0/0:29,0:29:84.29:0,84,2258	1/1:1,27:28:72.22:1302,72,0	1/1:1,11:12:27.09:512,27,0	0/0:24,0:24:72.25:0,72,1925	0/0:15,0:15:45.15:0,45,1210	1/1:0,24:24:54.19:1024,54,0	1/1:1,16:17:48.16:911,48,0	1/1:0,21:21:60.21:1138,60,0	1/1:3,32:35:80.33:1532,80,0	0/0:23,0:23:69.24:0,69,1821	1/1:2,22:24:69.13:1151,69,0	1/1:0,14:14:36.12:683,36,0	1/1:3,35:38:81.75:1538,82,0	0/0:18,0:18:54.19:0,54,1458	0/0:10,0:10:27.09:0,27,727	0/0:22,0:22:60.21:0,60,1589	1/1:0,9:9:24.08:455,24,0	1/1:0,22:22:63.19:1110,63,0	1/1:1,25:26:63.22:1194,63,0	1/1:0,6:6:15.05:285,15,0
chr10	59267095	.	A	ACTTTCTTT	9331.69	PASS	AC=50;AF=0.962;AN=52;BaseQRankSum=1.307;DP=553;FS=20.823;HRun=0;HaplotypeScore=141.9278;InbreedingCoeff=0.4299;MQ=61.43;MQ0=1;MQRankSum=-2.498;QD=18.16;ReadPosRankSum=-0.516;VQSLOD=2.7337;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:41:35.92:292,36,0	1/1:4,3:7:9.03:364,9,0	./.	./.	1/1:21,6:31:30.10:781,30,0	1/1:6,0:9:9.03:260,9,0	1/1:14,0:12:15.05:317,15,0	1/1:38,0:37:2.99:23,3,0	1/1:10,2:13:9.02:268,9,0	1/1:33,0:37:24.06:579,24,0	1/1:15,0:15:21.11:429,21,0	1/1:17,6:23:12.04:459,12,0	1/1:9,3:12:9.03:362,9,0	1/1:8,0:8:6.02:166,6,0	1/1:20,0:20:21.06:574,21,0	1/1:7,0:10:2.99:24,3,0	1/1:25,0:25:20.10:399,20,0	0/0:19,0:19:26.34:0,26,662	1/1:25,0:25:15.05:510,15,0	1/1:16,0:16:21.07:592,21,0	1/1:17,0:17:18.04:375,18,0	1/1:13,4:20:15.05:518,15,0	1/1:12,0:16:10.85:246,11,0	1/1:18,4:22:3.01:121,3,0	1/1:16,0:20:18.06:511,18,0	1/1:28,0:28:21.07:642,21,0	1/1:19,0:19:12.04:312,12,0	1/1:28,0:28:6.02:207,6,0
chr10	59267260	.	G	GT	1359.61	PASS	AC=28;AF=1.000;AN=28;DP=46;FS=0.000;HRun=2;HaplotypeScore=24.5974;InbreedingCoeff=-0.1109;MQ=33.95;MQ0=1;QD=34.86;VQSLOD=2.9148;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,3:3:6.02:94,6,0	1/1:0,1:1:3.01:47,3,0	./.	./.	1/1:0,4:4:3.01:48,3,0	1/1:0,3:3:9.03:142,9,0	1/1:0,3:3:8.52:104,9,0	1/1:0,3:3:9.03:143,9,0	./.	1/1:0,3:2:6.02:95,6,0	./.	./.	1/1:0,1:1:3.01:48,3,0	./.	./.	1/1:1,1:2:3.01:48,3,0	1/1:0,3:3:6.02:95,6,0	./.	./.	1/1:0,2:2:6.02:96,6,0	./.	./.	./.	./.	1/1:0,5:5:12.04:190,12,0	1/1:0,4:4:12.04:187,12,0	./.	1/1:0,2:2:6.02:95,6,0
chr10	59267265	.	CCA	C	766.94	PASS	AC=24;AF=1.000;AN=24;DP=28;FS=0.000;HRun=0;HaplotypeScore=26.6695;InbreedingCoeff=-0.1415;MQ=29.40;MQ0=0;QD=31.96;VQSLOD=4.7414;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,2:2:6.02:96,6,0	1/1:0,1:1:3.01:48,3,0	./.	./.	1/1:0,1:1:3:25,3,0	1/1:0,3:3:9.03:133,9,0	1/1:0,2:2:5.38:45,5,0	1/1:0,1:1:3.01:48,3,0	./.	1/1:0,3:2:6.02:97,6,0	./.	./.	./.	./.	./.	1/1:0,1:1:3.01:49,3,0	1/1:0,3:3:6.02:97,6,0	./.	./.	./.	./.	./.	./.	./.	1/1:0,3:3:3.01:37,3,0	1/1:1,1:2:5.99:67,6,0	./.	1/1:0,2:2:6.02:97,6,0
chr10	59267272	.	TTG	T	590.89	PASS	AC=14;AF=1.000;AN=14;DP=19;FS=0.000;HRun=0;HaplotypeScore=50.5082;MQ=26.65;MQ0=0;QD=34.76;VQSLOD=5.3797;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,2:2:5.91:65,6,0	1/1:0,1:1:2.90:16,3,0	./.	./.	./.	1/1:0,2:2:6.02:96,6,0	./.	./.	./.	1/1:0,3:2:6.02:97,6,0	./.	./.	./.	./.	./.	1/1:0,1:1:3.01:48,3,0	1/1:0,3:3:6.02:96,6,0	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	1/1:0,5:5:15.05:242,15,0
chr10	59267583	.	GTA	G	910.97	PASS	AB=1.000;AC=19;AF=0.380;AN=50;BaseQRankSum=0.517;DP=309;FS=12.928;HRun=0;HaplotypeScore=64.4136;InbreedingCoeff=0.3696;MQ=67.12;MQ0=14;MQRankSum=-1.400;QD=7.59;ReadPosRankSum=1.718;VQSLOD=1.4694;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,10:12:3.01:43,3,0	0/0:4,0:4:11.84:0,12,98	0/0:31,0:16:40.23:0,40,449	0/0:22,0:13:33.02:0,33,337	./.	0/0:10,0:10:0:0,0,0	./.	0/0:16,0:15:41.97:0,42,365	1/1:1,4:5:6.02:83,6,0	1/1:13,0:12:3.96:184,4,0	0/1:6,0:5:18.92:19,0,20	0/0:7,0:7:8.68:0,9,42	0/0:8,0:7:14.06:0,14,74	1/1:8,0:8:5.94:43,6,0	1/1:8,0:8:8.96:102,9,0	0/0:13,0:13:17.91:0,18,209	0/0:15,0:14:32.62:0,33,284	1/1:2,10:12:3.01:43,3,0	1/1:9,3:10:3.52:133,4,0	./.	0/1:18,0:18:29.25:119,0,29	0/0:10,0:10:5.91:0,6,28	0/0:6,0:5:2.70:0,3,7	0/0:19,0:18:9.95:0,10,42	0/0:5,0:4:5.92:0,6,43	0/1:10,0:9:10.37:170,0,10	0/1:12,0:10:21.22:96,0,21	0/1:4,0:4:0.55:33,0,1
chr10	59267587	.	ATGTG	A	338.24	PASS	AC=10;AF=0.227;AN=44;BaseQRankSum=-2.307;DP=345;FS=2.863;HRun=0;HaplotypeScore=79.8572;InbreedingCoeff=0.5620;MQ=60.27;MQ0=19;MQRankSum=-1.233;QD=5.64;ReadPosRankSum=0.330;VQSLOD=1.9223;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:13:5.98:0,6,86	0/0:3,0:6:6.02:0,6,95	./.	./.	0/0:12,0:12:0:0,0,0	./.	./.	./.	0/0:6,0:6:5.88:0,6,36	0/0:18,0:17:20.92:0,21,231	0/0:9,0:8:6.02:0,6,111	1/1:3,6:9:6.02:93,6,0	1/1:9,0:8:3.01:46,3,0	0/0:7,0:7:3:0,3,25	0/0:10,0:10:5.35:0,5,29	0/0:6,0:12:12.04:0,12,218	0/0:14,0:16:11.97:0,12,191	0/0:12,0:11:2.99:0,3,23	0/0:14,0:12:11.98:0,12,163	./.	0/0:19,0:19:16.63:0,17,333	1/1:3,7:10:6.02:85,6,0	1/1:3,5:7:8.99:111,9,0	1/1:11,13:23:9.03:134,9,0	0/0:5,0:4:6.02:0,6,140	0/0:13,0:12:15.04:0,15,187	0/0:14,0:12:6.02:0,6,140	0/0:6,0:4:3.01:0,3,68
chr10	59268326	.	TTATATATA	T	482.32	PASS	AB=0.901;AC=11;AF=0.500;AN=22;BaseQRankSum=3.118;DP=177;FS=10.488;HRun=0;HaplotypeScore=48.5850;InbreedingCoeff=0.0456;MQ=53.58;MQ0=8;MQRankSum=-1.984;QD=3.95;ReadPosRankSum=1.732;VQSLOD=0.0114;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,0:13:2.58:55,3,0	./.	./.	0/1:31,0:5:21.75:36,0,22	./.	0/0:3,0:3:3.01:0,3,113	0/0:1,0:2:3.01:0,3,65	0/1:28,0:27:36.23:36,0,109	./.	./.	./.	./.	./.	1/1:1,0:2:2.90:16,3,0	./.	./.	0/1:11,7:18:35.45:140,0,35	1/1:15,0:21:16.87:267,17,0	./.	./.	./.	./.	./.	./.	0/0:2,0:2:3.01:0,3,43	0/0:1,0:1:3:0,3,29	./.	1/1:2,0:7:5.80:31,6,0
chr10	59268548	.	TACACAC	T	381.12	PASS	AB=0.921;AC=28;AF=0.667;AN=42;BaseQRankSum=3.175;DP=388;FS=1.666;HRun=0;HaplotypeScore=77.1088;InbreedingCoeff=0.3836;MQ=56.81;MQ0=5;MQRankSum=-0.410;QD=2.02;ReadPosRankSum=-0.714;VQSLOD=1.3624;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:27:7.80:0,8,74	./.	./.	./.	./.	1/1:8,0:8:2.37:8,2,0	1/1:16,0:18:4.31:17,4,0	0/0:25,0:25:6.60:0,7,46	1/1:11,4:15:6.02:102,6,0	0/0:5,0:5:3.01:0,3,44	1/1:2,0:2:2.99:24,3,0	1/1:5,0:7:3.01:42,3,0	1/1:9,0:9:3.01:42,3,0	./.	1/1:11,3:14:3.01:60,3,0	0/0:13,0:18:6.02:0,6,81	0/0:19,0:26:11.73:0,12,126	0/0:18,0:16:9.92:0,10,135	./.	1/1:2,0:3:2.22:7,2,0	1/1:32,8:40:0.47:1,0,0	1/1:5,0:7:3.01:42,3,0	./.	0/1:26,0:32:0:0,0,0	1/1:5,0:5:3:25,3,0	1/1:14,0:13:5.81:47,6,0	1/1:5,5:10:3.01:60,3,0	0/1:3,0:2:32.43:35,0,32
chr10	59268905	.	G	GT	745.87	PASS	AB=0.559;AC=33;AF=0.660;AN=50;BaseQRankSum=-0.593;DP=245;FS=12.105;HRun=0;HaplotypeScore=35.7080;InbreedingCoeff=0.4465;MQ=67.06;MQ0=1;MQRankSum=1.227;QD=5.04;ReadPosRankSum=1.746;VQSLOD=1.5898;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:29.97:0,30,250	./.	0/0:13,0:9:12.74:0,13,155	0/0:15,0:13:16.97:0,17,149	1/1:2,0:2:0.47:1,0,0	1/1:3,0:10:2.58:16,3,0	0/1:3,13:17:12.67:72,0,13	0/0:10,0:10:11.99:0,12,101	0/0:8,0:8:11.98:0,12,99	1/1:5,0:5:5.16:47,5,0	1/1:4,0:4:2.95:20,3,0	1/1:1,6:7:3.46:24,3,0	1/1:13,1:15:0.41:115,0,0	./.	1/1:5,1:6:5.94:43,6,0	./.	0/0:16,0:16:36.69:0,37,229	0/0:3,0:3:5.36:0,5,32	1/1:7,3:11:4.73:78,5,0	1/1:2,0:2:3:25,3,0	0/1:6,3:21:9.78:13,0,10	0/1:1,0:6:0:0,0,0	1/1:2,0:2:2.97:25,3,0	1/1:8,0:8:14.64:120,15,0	1/1:6,0:6:8.39:87,8,0	1/1:2,0:10:1.93:129,2,0	1/1:3,1:12:2.07:17,2,0	1/1:3,0:3:8.98:72,9,0
chr10	59270861	.	G	GCACACACA	2564.32	PASS	AB=0.937;AC=22;AF=0.423;AN=52;BaseQRankSum=-7.129;DP=723;FS=2.521;HRun=0;HaplotypeScore=240.0379;InbreedingCoeff=0.2034;MQ=57.73;MQ0=17;MQRankSum=-1.324;QD=6.56;ReadPosRankSum=-0.539;VQSLOD=2.2350;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:44:29.36:0,29,459	0/0:18,0:18:13.01:0,13,409	./.	./.	0/0:25,0:24:9:0,9,140	1/1:11,9:23:18.06:634,18,0	1/1:24,18:43:5.75:167,6,0	0/1:34,0:33:66.29:66,0,142	0/0:14,0:14:24.08:0,24,448	0/1:25,0:25:29.16:29,0,256	0/0:15,0:15:0.08:0,0,265	1/1:11,13:29:18.06:569,18,0	1/1:13,14:28:19.62:656,20,0	0/0:29,0:29:2.10:0,2,608	0/1:25,0:25:44.27:44,0,685	0/0:25,0:25:33.10:0,33,571	0/0:20,0:20:15.54:0,16,576	0/1:18,0:18:56.68:57,0,171	0/1:15,0:15:35.35:35,0,279	0/0:23,0:22:18.06:0,18,315	0/0:55,0:55:39.71:0,40,933	1/1:21,0:21:11.76:226,12,0	0/1:8,1:18:0.25:0,0,0	0/1:14,8:22:0.01:0,0,0	0/1:24,0:24:16.40:16,0,657	0/1:28,0:28:96.34:96,0,487	0/1:24,0:24:60.49:60,0,359	1/1:12,0:12:8.99:75,9,0
chr10	59270882	.	CACACACAT	C	1914.53	PASS	AB=0.968;AC=19;AF=0.339;AN=56;BaseQRankSum=-8.961;DP=747;FS=9.602;HRun=0;HaplotypeScore=230.1649;InbreedingCoeff=-0.3636;MQ=55.42;MQ0=17;MQRankSum=2.637;QD=3.79;ReadPosRankSum=-8.959;VQSLOD=-0.7413;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:44,3:47:99:304,0,264	0/0:16,0:16:18.62:0,19,134	0/0:19,0:9:24.06:0,24,547	0/1:31,0:7:7.74:8,0,82	0/1:24,3:26:30.74:54,0,31	0/0:19,0:19:0.08:0,0,503	0/1:40,0:39:99:107,0,144	0/1:42,0:41:99:366,0,297	1/1:11,1:12:23.78:223,24,0	0/1:26,0:26:99:135,0,390	0/0:16,0:16:21.30:0,21,261	0/1:33,0:33:99:110,0,573	0/1:33,0:33:99:100,0,397	0/0:30,0:30:35.74:0,36,709	0/0:25,0:25:21.93:0,22,847	0/0:28,0:28:11.57:0,12,140	0/1:26,0:26:8.64:9,0,112	0/1:7,11:18:74.64:200,0,75	0/1:19,0:18:75.20:75,0,397	0/0:25,0:24:17.74:0,18,208	0/0:58,0:57:71.57:0,72,1062	0/1:21,0:21:52.84:53,0,357	0/1:21,0:20:17.92:81,0,18	0/1:21,0:21:18.47:18,0,18	0/1:27,0:27:6.70:7,0,1402	0/1:32,0:32:93.33:93,0,688	0/1:29,0:29:99:134,0,635	0/0:6,0:5:8.68:0,9,81
chr10	59270886	.	CACAT	C	6641.95	PASS	AB=0.982;AC=41;AF=0.732;AN=56;BaseQRankSum=-7.202;DP=739;FS=5.893;HRun=0;HaplotypeScore=180.6043;InbreedingCoeff=-0.1397;MQ=56.05;MQ0=14;MQRankSum=4.376;QD=9.25;ReadPosRankSum=-0.385;VQSLOD=3.8840;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:46,1:47:99:224,0,110	1/1:3,12:15:30.10:543,30,0	0/0:20,0:13:30.06:0,30,391	0/1:26,0:6:0.53:1,0,81	0/1:27,0:26:25.60:57,0,26	0/1:19,0:19:44.88:45,0,162	0/1:37,0:36:36.31:179,0,36	1/1:8,38:45:14.55:1032,15,0	1/1:12,0:12:24.06:260,24,0	1/1:7,18:25:39.42:438,39,0	0/1:15,2:17:2.30:104,0,2	0/1:33,0:33:99:210,0,157	0/1:34,0:34:99:172,0,110	1/1:27,3:30:9.03:200,9,0	1/1:23,2:25:17.04:243,17,0	1/1:2,26:28:32.86:598,33,0	1/1:4,22:26:33.01:574,33,0	0/1:18,0:18:64.97:108,0,65	1/1:18,0:17:16.87:141,17,0	1/1:21,3:23:8.43:168,8,0	0/1:50,7:56:30.11:316,0,30	0/1:20,0:20:80.63:95,0,81	0/1:20,0:19:11.66:80,0,12	1/1:19,0:19:2.58:25,3,0	0/1:27,0:27:97.37:97,0,422	1/1:32,2:34:49.23:443,49,0	1/1:27,1:28:30.83:273,31,0	1/1:6,0:5:4.16:15,4,0
chr10	59270888	.	CAT	C	9197.46	PASS	AB=0.980;AC=45;AF=0.804;AN=56;BaseQRankSum=-5.370;DP=714;FS=0.000;HRun=0;HaplotypeScore=153.0789;InbreedingCoeff=0.1028;MQ=57.20;MQ0=12;MQRankSum=4.221;QD=13.65;ReadPosRankSum=2.198;VQSLOD=4.4427;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:45,0:45:46.25:164,0,46	1/1:13,0:13:29.63:219,30,0	0/0:19,0:14:33.02:0,33,342	0/0:21,0:5:1.86:0,2,83	0/1:26,0:25:15.50:28,0,15	0/1:19,0:19:12.25:77,0,12	0/1:33,0:32:1.59:181,0,2	1/1:44,1:44:50.42:751,50,0	1/1:12,0:12:23.56:148,24,0	1/1:20,5:25:59.96:601,60,0	1/1:3,14:17:17.76:227,18,0	0/1:33,0:33:10.03:260,0,10	1/1:31,0:31:15.85:242,16,0	1/1:5,24:29:50.35:679,50,0	1/1:11,15:26:72.09:916,72,0	1/1:27,0:27:32.51:244,33,0	1/1:26,0:26:32.76:240,33,0	0/1:17,0:17:39.42:80,0,39	1/1:2,14:15:42.01:505,42,0	1/1:4,19:22:17.99:204,18,0	1/1:11,45:55:48.26:844,48,0	1/1:20,0:20:1:151,1,0	1/1:21,0:20:2.89:105,3,0	1/1:19,0:19:2.97:25,3,0	0/1:21,4:25:99:334,0,148	1/1:3,32:35:91.45:983,91,0	1/1:18,11:29:77.97:851,78,0	1/1:1,5:5:9.03:137,9,0
chr10	59272593	.	T	TAC	1263.73	PASS	AB=0.952;AC=30;AF=0.600;AN=50;BaseQRankSum=-4.481;DP=545;FS=6.013;HRun=0;HaplotypeScore=100.8705;InbreedingCoeff=0.2645;MQ=63.68;MQ0=12;MQRankSum=1.088;QD=3.50;ReadPosRankSum=0.413;VQSLOD=1.8612;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:39,0:39:1.15:115,0,1	0/0:4,0:4:2.84:0,3,14	./.	./.	0/1:17,0:17:20.19:58,0,20	1/1:10,0:17:2.47:9,2,0	0/0:11,0:17:6.15:0,6,29	0/1:17,0:17:0:0,0,0	1/1:13,3:18:3.01:44,3,0	0/1:14,0:15:6.87:22,0,7	1/1:11,5:16:9.03:133,9,0	0/0:10,0:15:5.03:0,5,27	0/0:9,0:10:0.47:0,0,1	0/1:14,5:22:77.97:114,0,78	1/1:7,5:13:3.01:44,3,0	1/1:8,8:19:12.04:177,12,0	0/0:17,0:32:33.76:0,34,160	0/0:16,0:28:19.54:0,20,97	1/1:11,0:10:0.47:1,0,0	1/1:6,4:11:6.02:88,6,0	0/1:38,5:44:29.79:30,0,71	0/1:12,0:17:0.16:0,0,0	0/1:8,0:20:0:0,0,0	./.	1/1:9,6:15:6.02:88,6,0	1/1:12,9:21:3.96:240,4,0	1/1:16,0:16:14.99:163,15,0	1/1:9,2:11:6.02:77,6,0
chr10	59273159	.	GA	G	87.71	PASS	AB=0.826;AC=9;AF=0.161;AN=56;BaseQRankSum=1.628;DP=584;FS=0.000;HRun=18;HaplotypeScore=113.4018;InbreedingCoeff=-0.1742;MQ=75.37;MQ0=5;MQRankSum=1.587;QD=0.46;ReadPosRankSum=4.864;VQSLOD=-0.6401;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:28:25.90:0,26,141	0/1:8,2:10:11.15:11,0,52	0/1:37,1:22:6.52:7,0,84	0/1:22,1:18:10.51:11,0,25	0/0:27,0:25:46.23:0,46,248	0/1:17,9:27:21.36:60,0,21	0/1:16,7:24:62.31:64,0,62	0/0:15,0:17:17.73:0,18,116	0/0:15,1:15:25.07:0,25,129	0/0:21,1:33:22.07:0,22,165	0/0:10,0:16:15.54:0,16,95	0/1:17,6:23:4.19:4,0,32	0/0:14,2:16:2.98:0,3,22	0/0:19,1:19:31.86:0,32,169	0/0:23,1:27:26.44:0,26,207	0/0:8,0:21:12.57:0,13,75	0/0:17,0:17:30.88:0,31,205	0/0:24,0:24:47.29:0,47,252	0/0:21,0:23:33.89:0,34,210	0/0:14,0:24:30.73:0,31,168	0/0:9,0:13:22.74:0,23,125	0/1:10,5:15:13.12:22,0,13	0/1:16,2:19:31.50:33,0,32	0/1:8,3:11:6.59:7,0,35	0/0:10,0:19:19.38:0,19,121	0/0:24,0:23:25.85:0,26,166	0/0:25,0:25:32.69:0,33,203	0/0:2,0:2:5.03:0,5,28
chr10	59274994	.	T	TG	6728.04	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-14.597;DP=619;FS=5.572;HRun=8;HaplotypeScore=71.4868;InbreedingCoeff=0.9940;MQ=80.87;MQ0=0;MQRankSum=-2.121;QD=25.20;ReadPosRankSum=1.025;VQSLOD=5.7411;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:95.71:0,96,844	0/0:8,0:8:17.99:0,18,162	0/0:20,0:19:29.22:0,29,329	0/0:16,0:16:28.89:0,29,229	0/0:26,0:26:77.38:0,77,680	0/0:21,0:21:60.03:0,60,549	0/0:19,0:19:47.92:0,48,418	0/0:29,0:29:59.99:0,60,539	0/0:17,0:17:44.39:0,44,372	1/1:5,26:30:75.21:856,75,0	1/1:2,18:20:51.15:589,51,0	0/0:18,0:18:48.02:0,48,439	0/0:14,0:14:39.02:0,39,357	1/1:6,13:19:17.65:446,18,0	1/1:5,27:32:62.94:712,63,0	1/1:6,11:17:27.08:312,27,0	0/0:38,0:38:96.01:0,96,871	0/0:21,0:21:63.03:0,63,576	1/1:10,11:22:14.44:379,14,0	1/1:2,25:27:63.15:712,63,0	1/1:0,16:17:44.97:499,45,0	0/0:23,0:23:63.03:0,63,577	0/0:24,0:24:65.99:0,66,590	0/0:24,0:24:69.02:0,69,628	1/1:0,17:17:48.14:554,48,0	1/1:6,17:23:51.11:557,51,0	1/1:4,25:28:75.22:862,75,0	1/1:2,9:13:19.95:251,20,0
chr10	59275585	.	TCACA	T	1213	PASS	AB=0.869;AC=22;AF=0.440;AN=50;BaseQRankSum=3.509;DP=577;FS=0.793;HRun=0;HaplotypeScore=101.2656;InbreedingCoeff=0.3591;MQ=70.42;MQ0=8;MQRankSum=0.768;QD=4.17;ReadPosRankSum=1.693;VQSLOD=1.3564;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:30:3:28,3,0	0/0:14,0:14:12:0,12,231	./.	./.	1/1:13,0:19:6.01:55,6,0	0/0:19,0:19:3.01:0,3,42	0/0:21,0:27:22.46:0,22,113	0/0:23,0:23:10.85:0,11,151	1/1:6,0:14:15.02:140,15,0	1/1:26,7:33:14.60:250,15,0	1/1:11,5:16:9.03:140,9,0	0/1:21,3:25:56.84:122,0,57	0/1:16,1:20:29.58:99,0,30	0/0:16,0:17:11.07:0,11,160	0/0:20,0:22:8.76:0,9,124	0/0:14,0:14:6.02:0,6,141	0/0:16,0:18:26.83:0,27,548	0/0:16,0:18:1.25:0,1,3	1/1:20,2:23:8.89:116,9,0	0/1:7,3:11:3.47:66,0,3	1/1:23,2:25:5.96:66,6,0	0/0:12,0:17:8.48:0,8,48	0/1:11,0:12:17.83:22,0,18	0/0:25,0:33:22.47:0,22,167	0/1:13,1:14:31.55:32,0,213	0/1:25,2:27:8.88:63,0,9	1/1:14,7:21:12.04:186,12,0	./.
chr10	59276459	.	AAAAG	A	14761.06	PASS	AB=1.000;AC=39;AF=0.696;AN=56;BaseQRankSum=13.809;DP=603;FS=3.749;HRun=0;HaplotypeScore=107.0706;InbreedingCoeff=0.9089;MQ=69.89;MQ0=1;MQRankSum=-0.766;QD=34.17;ReadPosRankSum=2.706;VQSLOD=5.1051;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,120,2824	0/0:8,0:8:24.08:0,24,601	0/0:15,0:15:17.83:0,18,282	0/1:14,0:10:10.65:11,0,264	0/0:19,0:19:51.17:0,51,1213	1/1:5,15:20:36.12:617,36,0	1/1:4,18:22:10.07:637,10,0	0/0:22,0:22:54.17:0,54,1201	0/0:22,0:22:60.20:0,60,1454	1/1:4,26:30:78.26:1300,78,0	1/1:0,20:20:54.18:881,54,0	1/1:4,22:26:33.73:708,34,0	1/1:5,20:24:51.17:876,51,0	1/1:2,17:19:36.12:619,36,0	1/1:4,20:23:39.13:653,39,0	1/1:3,9:11:18.06:310,18,0	0/0:25,0:25:51.17:0,51,1226	0/0:16,0:16:45.15:0,45,1055	1/1:4,22:26:63.15:974,63,0	1/1:2,22:24:63.15:1007,63,0	1/1:2,20:22:36.08:587,36,0	1/1:1,21:22:51:748,51,0	1/1:1,13:14:21.06:361,21,0	1/1:3,29:32:68.94:1183,69,0	1/1:1,21:22:45.15:772,45,0	1/1:1,26:27:78.27:1332,78,0	1/1:1,21:22:54.03:926,54,0	1/1:0,9:9:15.05:258,15,0
chr10	59277215	.	GA	G	740.92	PASS	AB=0.846;AC=8;AF=0.143;AN=56;BaseQRankSum=5.149;DP=542;FS=0.000;HRun=12;HaplotypeScore=65.8454;InbreedingCoeff=0.4442;MQ=71.50;MQ0=1;MQRankSum=0.202;QD=6.07;ReadPosRankSum=0.936;VQSLOD=1.8741;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:81.07:0,81,789	1/1:1,4:5:5.97:46,6,0	0/0:27,0:19:13.45:0,13,260	0/1:19,0:15:21.59:35,0,22	0/1:18,3:21:10.40:10,0,268	0/0:21,1:22:30.75:0,31,444	0/0:14,0:15:32.10:0,32,346	0/1:16,14:32:6.31:294,0,6	0/0:14,0:14:35.86:0,36,329	0/0:13,1:14:19.12:0,19,237	0/0:20,1:21:18.72:0,19,337	0/0:16,1:17:18.80:0,19,346	0/0:17,0:17:27.92:0,28,290	0/0:7,0:8:11.17:0,11,141	0/0:25,0:27:62.94:0,63,616	0/0:16,0:16:33.94:0,34,332	1/1:6,22:28:62.75:488,63,0	0/0:18,3:21:18.84:0,19,363	0/0:26,0:26:62.93:0,63,608	0/0:18,0:18:51.04:0,51,496	0/0:15,0:17:35.88:0,36,336	0/0:20,0:23:38.72:0,39,346	0/0:14,0:14:36.06:0,36,359	0/0:8,0:10:29.76:0,30,273	0/1:14,2:16:1.46:1,0,329	0/0:25,1:27:39.83:0,40,561	0/0:15,0:16:41.88:0,42,388	0/0:10,0:10:27.04:0,27,268
chr10	59279647	.	CACAAA	C	24099.61	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-3.831;DP=707;FS=8.015;HRun=0;HaplotypeScore=158.9388;InbreedingCoeff=0.9978;MQ=62.76;MQ0=0;MQRankSum=-4.154;QD=45.73;ReadPosRankSum=3.932;VQSLOD=4.6339;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,126,3697	1/1:1,10:11:24.08:480,24,0	0/0:30,0:24:63.21:0,63,1639	0/0:19,0:17:43.36:0,43,996	0/0:34,0:34:93.32:0,93,2706	1/1:3,15:18:36.12:653,36,0	1/1:5,21:26:57.19:1117,57,0	1/1:5,27:31:78.23:1447,78,0	0/0:28,0:28:78.27:0,78,2298	1/1:4,25:29:75.25:1462,75,0	1/1:1,17:18:42.14:747,42,0	1/1:3,21:24:51.65:1000,52,0	1/1:3,20:23:57.19:1116,57,0	1/1:2,20:22:51.17:997,51,0	1/1:1,25:26:63.22:1259,63,0	1/1:4,21:24:57.20:1140,57,0	1/1:2,32:34:78.27:1559,78,0	0/0:24,0:24:69.20:0,69,2001	1/1:1,11:12:33.11:637,33,0	1/1:2,18:20:54.18:1017,54,0	1/1:4,38:42:99:1979,99,0	1/1:1,22:23:63.22:1236,63,0	1/1:0,21:21:39.13:756,39,0	1/1:5,29:34:72.25:1440,72,0	1/1:1,20:21:42.14:795,42,0	1/1:0,34:34:99:1916,102,0	1/1:5,21:26:51.16:985,51,0	1/1:0,6:6:18.06:360,18,0
chr10	59280039	.	CACACACAT	C	14927.21	PASS	AB=0.527;AC=36;AF=0.643;AN=56;BaseQRankSum=17.122;DP=1002;FS=2.321;HRun=0;HaplotypeScore=326.7914;InbreedingCoeff=0.8171;MQ=52.48;MQ0=4;MQRankSum=-11.362;QD=22.35;ReadPosRankSum=1.447;VQSLOD=3.8715;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:43:99:0,111,4375	0/0:16,0:16:42.10:0,42,1475	0/0:45,0:27:63.03:0,63,2357	0/0:46,0:34:49.07:0,49,2691	0/0:23,0:23:63.19:0,63,2478	1/1:0,23:23:15.05:382,15,0	1/1:2,22:24:9.03:226,9,0	0/0:51,0:51:99:0,138,4769	0/0:44,0:44:99:0,126,4485	1/1:2,42:44:99:2452,105,0	1/1:2,22:24:8.63:95,9,0	1/1:1,57:58:51.89:1344,52,0	1/1:0,37:37:44.86:1160,45,0	1/1:2,45:47:18.06:476,18,0	1/1:2,53:55:39.13:1012,39,0	1/1:1,36:37:42.09:1074,42,0	0/0:28,0:28:81.28:0,81,3282	0/0:36,0:36:99:0,102,4088	1/1:0,26:26:77.30:1300,77,0	1/1:1,22:23:11.92:133,12,0	1/1:16,41:57:12.11:175,12,0	1/1:2,29:31:17.83:275,18,0	0/1:2,19:21:14.98:66,0,15	0/1:4,32:36:11.69:14,0,12	1/1:1,31:32:15.05:402,15,0	1/1:3,47:50:99:3058,137,0	1/1:1,34:35:36.12:959,36,0	1/1:0,8:8:12.04:324,12,0
chr10	59280047	.	T	TAC	2644.79	PASS	AB=1.000;AC=33;AF=0.589;AN=56;BaseQRankSum=16.403;DP=996;FS=3.618;HRun=0;HaplotypeScore=305.9777;InbreedingCoeff=0.6360;MQ=50.90;MQ0=3;MQRankSum=-11.795;QD=4.29;ReadPosRankSum=1.036;VQSLOD=2.5069;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:45:99:0,113,1639	0/0:15,0:15:39.12:0,39,540	0/0:49,0:32:82.85:0,83,1112	0/0:44,0:32:81.16:0,81,1039	0/0:22,0:22:66.13:0,66,885	1/1:25,0:25:2.71:53,3,0	0/1:25,0:25:2.87:43,0,3	0/0:55,0:55:99:0,150,2051	0/0:43,0:43:99:0,126,1713	1/1:43,1:44:71.62:505,72,0	1/1:22,0:22:2.90:16,3,0	0/1:58,0:58:29.43:159,0,29	0/1:38,0:38:45.73:188,0,46	1/1:46,0:46:11.43:57,11,0	1/1:55,0:55:32.70:193,33,0	1/1:36,1:37:28.98:135,29,0	0/0:31,0:31:81.22:0,81,1117	0/0:38,0:38:99:0,108,1455	1/1:26,0:26:47.80:476,48,0	1/1:22,0:22:2.88:15,3,0	1/1:43,4:47:5.73:35,6,0	1/1:31,0:31:8.47:48,8,0	1/1:19,0:19:2.90:16,3,0	0/0:36,0:36:0.39:0,0,1	1/1:31,0:31:10.95:50,11,0	1/1:47,1:48:88.17:641,88,0	1/1:34,1:35:24.47:150,24,0	1/1:8,0:8:7.37:62,7,0
chr10	59282114	.	C	CAA	16687.75	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-18.130;DP=740;FS=7.239;HRun=1;HaplotypeScore=80.4127;InbreedingCoeff=0.9991;MQ=77.80;MQ0=3;MQRankSum=-2.378;QD=50.88;ReadPosRankSum=0.343;VQSLOD=4.2367;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:58:99:0,163,2474	0/0:17,0:17:51.17:0,51,778	0/0:15,0:15:44.81:0,45,607	0/0:20,0:20:51.12:0,51,651	0/0:22,0:22:60.19:0,60,898	0/0:14,0:14:39.13:0,39,587	0/0:30,0:30:84.27:0,84,1265	0/0:18,0:18:51.16:0,51,761	0/0:29,0:29:81.27:0,81,1236	1/1:0,31:32:96.30:1817,96,0	1/1:2,18:20:60.13:1082,60,0	0/0:18,0:18:54.12:0,54,779	0/0:8,0:8:24.08:0,24,367	1/1:0,29:28:78.27:1507,78,0	1/1:0,27:26:75.26:1449,75,0	1/1:1,26:27:66.06:1275,66,0	0/0:57,0:57:99:0,172,2570	0/0:29,0:29:84.23:0,84,1238	1/1:1,31:31:90.31:1724,90,0	1/1:0,24:24:72.25:1368,72,0	1/1:2,46:49:99:2242,120,0	0/0:15,0:15:39.09:0,39,552	0/0:24,0:24:66.22:0,66,1010	0/0:38,0:38:99:0,114,1687	1/1:1,19:20:48.16:927,48,0	1/1:0,26:26:78.27:1500,78,0	1/1:3,29:32:72.25:1390,72,0	1/1:0,10:10:21.07:406,21,0
chr10	59284681	.	CGGTA	C	28818.45	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-1.385;DP=700;FS=7.501;HRun=0;HaplotypeScore=159.3921;InbreedingCoeff=0.9950;MQ=80.60;MQ0=0;MQRankSum=-10.169;QD=43.93;ReadPosRankSum=7.063;VQSLOD=4.6168;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,42:42:93.32:1735,93,0	1/1:2,11:13:27.09:503,27,0	0/0:22,0:22:57.15:0,57,1389	0/0:21,0:22:54.14:0,54,1365	1/1:4,10:14:24.08:448,24,0	1/1:0,22:22:60.21:1119,60,0	1/1:0,20:20:48.16:894,48,0	1/1:8,28:36:87.30:1597,87,0	1/1:0,27:27:72.25:1343,72,0	1/1:4,20:24:60.21:1116,60,0	1/1:1,9:10:24.08:447,24,0	1/1:1,32:33:90.31:1677,90,0	1/1:2,22:24:63.22:1174,63,0	1/1:0,32:32:87.30:1623,87,0	1/1:1,27:29:75.73:1400,76,0	1/1:3,26:29:75.26:1398,75,0	1/1:0,35:35:84.29:1567,84,0	1/1:4,22:26:45.15:839,45,0	1/1:2,21:23:60.21:1118,60,0	1/1:1,16:17:42.14:783,42,0	1/1:6,38:44:68.61:1287,69,0	1/1:1,11:12:30.10:559,30,0	1/1:0,13:13:21.07:391,21,0	1/1:1,36:37:87.30:1623,87,0	1/1:5,22:27:51.17:951,51,0	1/1:2,19:21:54.17:965,54,0	1/1:2,24:26:63.19:1142,63,0	1/1:0,20:20:60.21:1119,60,0
chr10	59284992	.	C	CTCTGTCTGTCTGTCTG	13752.46	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-9.976;DP=739;FS=11.636;HRun=0;HaplotypeScore=306.6375;InbreedingCoeff=0.9547;MQ=69.52;MQ0=0;MQRankSum=-11.590;QD=53.93;ReadPosRankSum=-3.547;VQSLOD=2.7378;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:43:99:0,105,3856	1/1:4,9:14:12.04:907,12,0	0/0:23,0:21:21.07:0,21,530	0/0:31,0:29:48.16:0,48,1596	0/0:20,0:20:36.12:0,36,1518	1/1:11,16:27:21.07:1598,21,0	1/1:12,12:24:12.04:852,12,0	1/1:46,0:38:60.19:2143,60,0	0/0:22,0:22:54.17:0,54,1934	0/0:31,0:31:72.20:0,72,2736	0/0:20,0:20:42.13:0,42,1562	1/1:14,16:32:45.15:3361,45,0	1/1:16,8:24:33.11:2251,33,0	0/0:25,0:25:54.19:0,54,2250	0/0:31,0:31:69.21:0,69,2536	0/0:28,0:28:60.15:0,60,2080	1/1:16,0:16:9.03:384,9,0	0/0:18,0:18:42.14:0,42,1670	0/0:22,0:22:42.13:0,42,1236	0/0:26,0:26:54.17:0,54,2033	0/0:54,0:54:99:0,105,3807	1/1:7,10:20:12.04:910,12,0	1/1:7,12:19:5.70:456,6,0	1/1:19,12:33:12.04:890,12,0	0/0:22,0:22:39.11:0,39,1403	0/0:27,0:27:45.14:0,45,1723	0/0:23,0:23:45.15:0,45,1675	0/0:17,0:17:33.11:0,33,1383
chr10	59285161	.	T	TA	8169.81	PASS	AB=0.585;AC=50;AF=0.893;AN=56;BaseQRankSum=-3.296;DP=637;FS=46.399;HRun=11;HaplotypeScore=87.3149;InbreedingCoeff=0.4841;MQ=70.83;MQ0=1;MQRankSum=-3.265;QD=13.73;ReadPosRankSum=3.564;VQSLOD=1.8230;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,43:51:44.26:942,44,0	0/1:2,5:7:5.24:123,0,5	0/0:26,0:26:11.78:0,12,244	0/0:15,0:15:3.80:0,4,99	1/1:2,16:19:35.87:338,36,0	1/1:5,17:22:1.63:380,2,0	1/1:6,18:24:7.63:441,8,0	1/1:7,21:30:53.44:531,53,0	1/1:2,14:16:36.07:366,36,0	1/1:15,2:26:39.70:253,40,0	1/1:5,1:18:15.42:190,15,0	1/1:7,18:25:9.61:262,10,0	1/1:0,12:12:24.05:243,24,0	1/1:5,0:19:14.20:72,14,0	1/1:6,2:32:43.11:263,43,0	1/1:5,1:22:36.77:201,37,0	1/1:2,23:25:42.89:616,43,0	1/1:3,19:22:21.85:403,22,0	1/1:7,2:24:41.70:243,42,0	1/1:4,1:24:26.44:251,26,0	1/1:1,1:13:22.89:130,23,0	1/1:5,10:15:24.05:243,24,0	0/1:5,12:17:10.81:242,0,11	1/1:7,22:29:40.85:587,41,0	1/1:4,0:18:21.13:103,21,0	1/1:7,3:31:35.35:282,35,0	1/1:7,1:25:34.39:194,34,0	1/1:3,0:27:53.97:271,54,0
chr10	59290396	.	AACACACACAC	A	1688.95	PASS	AC=10;AF=0.200;AN=50;BaseQRankSum=2.862;DP=577;FS=0.000;HRun=0;HaplotypeScore=168.8452;InbreedingCoeff=0.8357;MQ=73.12;MQ0=8;MQRankSum=-6.777;QD=13.09;ReadPosRankSum=-0.495;VQSLOD=2.4199;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:29:27.09:0,27,995	0/0:4,0:4:9.03:0,9,230	./.	./.	0/0:11,0:11:9.03:0,9,304	1/1:8,8:15:12:288,12,0	1/1:25,11:36:12.03:234,12,0	0/0:24,0:23:21.07:0,21,444	0/0:22,0:25:33.11:0,33,1240	0/0:18,0:18:22.63:0,23,684	0/0:11,0:11:14.99:0,15,625	1/1:12,14:27:30.06:770,30,0	1/1:8,5:13:12.04:356,12,0	0/0:18,0:18:15.47:0,15,576	0/0:16,0:22:12.17:0,12,371	0/0:26,0:26:15.05:0,15,618	0/0:20,0:32:31.94:0,32,772	0/0:21,0:28:42.14:0,42,1701	0/0:13,0:13:15.05:0,15,565	0/0:9,0:9:5.98:0,6,172	0/0:28,0:26:33.11:0,33,1271	./.	0/0:0,7:7:0:0,0,0	1/1:25,10:36:8.59:198,9,0	0/0:25,0:25:29.38:0,29,930	0/0:26,0:26:43.70:0,44,1510	0/0:18,0:18:24.08:0,24,919	0/0:5,0:4:6.02:0,6,240
chr10	59294906	.	TCCCTCCCTCTCCCC	T	1380.65	PASS	AB=1.000;AC=18;AF=0.391;AN=46;BaseQRankSum=-0.152;DP=329;FS=16.545;HRun=0;HaplotypeScore=67.7987;InbreedingCoeff=0.2454;MQ=28.31;MQ0=58;MQRankSum=2.601;QD=11.22;ReadPosRankSum=1.169;VQSLOD=0.0863;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:7:5.98:0,6,47	0/0:9,0:8:14.57:0,15,173	./.	0/0:23,0:1:3.01:0,3,66	./.	1/1:4,0:4:9.01:169,9,0	1/1:9,0:5:8.76:203,9,0	0/0:21,0:17:29:0,29,269	./.	0/0:9,0:8:13.26:0,13,150	./.	1/1:8,0:6:8.53:211,9,0	1/1:6,0:5:12.04:327,12,0	0/1:16,0:12:39.72:136,0,40	0/0:11,0:8:4.56:0,5,15	0/1:8,0:6:30.11:30,0,41	0/1:12,0:6:36:52,0,36	0/0:14,0:11:17.44:0,17,257	0/0:22,0:17:23.93:0,24,338	0/0:7,0:7:2.48:0,2,21	0/0:20,0:17:0.45:0,0,1	./.	1/1:2,0:2:3.01:50,3,0	1/1:16,0:13:9.03:219,9,0	0/0:19,0:18:11.95:0,12,124	0/1:12,0:9:62.50:63,0,62	0/1:13,0:10:19.09:19,0,72	0/1:17,0:10:23.84:55,0,24
chr10	59294918	.	CCCCTCTCTCT	C	621.52	PASS	AB=0.944;AC=21;AF=0.438;AN=48;BaseQRankSum=-2.474;DP=386;FS=1.784;HRun=0;HaplotypeScore=70.9126;InbreedingCoeff=0.0502;MQ=28.41;MQ0=97;MQRankSum=-0.747;QD=2.85;ReadPosRankSum=4.847;VQSLOD=1.1458;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:7:5.67:0,6,28	1/1:10,0:9:4.99:25,5,0	./.	0/0:22,0:1:2.88:0,3,15	./.	1/1:9,0:7:4.62:35,5,0	0/1:13,0:7:10.06:10,0,60	1/1:23,0:18:22.13:149,22,0	0/0:8,0:7:5.67:0,6,35	1/1:12,0:9:11.44:93,11,0	./.	0/1:19,0:11:9.59:10,0,25	0/1:12,0:9:49.67:50,0,50	0/1:18,0:11:8.39:8,0,18	0/0:13,2:11:6.45:0,6,48	0/1:6,0:5:19.07:22,0,19	0/0:16,0:9:13.27:0,13,77	0/0:16,0:12:10.72:0,11,61	0/1:25,0:16:31.22:220,0,31	1/1:6,0:6:2.90:16,3,0	0/0:18,0:15:0:0,0,0	./.	0/0:8,0:5:6.01:0,6,57	0/1:21,0:16:9.50:10,0,95	0/0:17,0:15:2.92:0,3,21	0/1:4,6:8:8.72:67,0,9	0/1:9,0:7:11.49:11,0,26	1/1:24,0:10:8.32:44,8,0
chr10	59295692	.	A	ACACATG	2055.37	PASS	AB=0.511;AC=13;AF=0.232;AN=56;BaseQRankSum=2.369;DP=950;FS=22.996;HRun=0;HaplotypeScore=198.4147;InbreedingCoeff=0.8749;MQ=53.11;MQ0=19;MQRankSum=-8.360;QD=10.49;ReadPosRankSum=-0.152;VQSLOD=1.2429;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,141,2823	0/0:8,0:8:21.06:0,21,424	0/0:70,0:13:16.46:0,16,238	0/0:73,0:22:41.84:0,42,591	0/0:33,0:33:84.13:0,84,1573	1/1:5,25:31:15.05:454,15,0	1/1:6,29:37:6.49:190,6,0	0/0:54,0:53:99:0,111,1675	0/0:33,0:33:88.07:0,88,1712	0/0:47,0:47:99:0,111,2278	0/0:19,0:19:48.16:0,48,1005	1/1:3,23:28:30.10:976,30,0	1/1:4,15:18:11.97:309,12,0	0/0:28,0:28:81.17:0,81,1534	0/0:25,0:25:69.24:0,69,1491	0/0:26,0:26:74.94:0,75,1349	0/0:44,0:43:99:0,104,2147	0/0:28,0:28:53.59:0,54,1403	0/0:17,0:16:32.85:0,33,441	0/0:25,0:25:66.20:0,66,1332	0/0:83,0:82:99:0,192,3707	0/1:1,20:24:0.15:1,0,0	1/1:5,21:28:3.17:88,3,0	1/1:5,22:29:6.02:204,6,0	0/0:26,0:26:72.23:0,72,1516	0/0:24,0:24:63.22:0,63,1318	0/0:25,0:24:66.23:0,66,1395	0/0:11,0:11:18.01:0,18,311
chr10	59296772	.	GCACA	G	260.04	PASS	AB=0.922;AC=14;AF=0.538;AN=26;BaseQRankSum=0.996;DP=443;FS=0.000;HRun=0;HaplotypeScore=106.4368;InbreedingCoeff=0.1665;MQ=52.58;MQ0=26;MQRankSum=1.268;QD=1.71;ReadPosRankSum=1.359;VQSLOD=1.9316;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:37,0:34:9.01:86,9,0	./.	./.	./.	1/1:11,0:11:0.47:1,0,0	./.	./.	0/0:17,0:17:0.47:0,0,1	0/1:17,0:15:13.71:14,0,30	0/0:12,0:11:1.25:0,1,3	./.	./.	1/1:11,0:15:3:28,3,0	./.	1/1:16,0:14:2.96:23,3,0	1/1:16,0:13:9.02:117,9,0	0/0:26,0:25:0:0,0,0	0/1:22,5:24:38.30:38,0,64	./.	./.	./.	./.	0/0:11,0:10:3.01:0,3,39	./.	./.	./.	1/1:13,0:11:3.01:43,3,0	0/0:6,0:5:0.47:0,0,1
chr10	59298243	.	CCA	C	892.14	PASS	AB=0.917;AC=15;AF=0.341;AN=44;BaseQRankSum=-1.962;DP=434;FS=14.416;HRun=0;HaplotypeScore=64.2495;InbreedingCoeff=0.6106;MQ=65.83;MQ0=11;MQRankSum=0.425;QD=5.68;ReadPosRankSum=0.373;VQSLOD=1.2406;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:26:8.98:84,9,0	0/0:4,0:6:5.94:0,6,63	./.	./.	0/1:10,1:10:17.81:26,0,18	1/1:9,5:15:5.68:43,6,0	1/1:22,2:26:20.08:165,20,0	0/0:28,0:27:15.73:0,16,102	1/1:10,3:13:9.02:97,9,0	0/0:7,0:7:2.92:0,3,17	0/0:6,0:5:5.98:0,6,48	1/1:7,0:7:3.01:31,3,0	./.	0/0:6,0:13:3.47:0,3,27	0/0:7,0:12:5.92:0,6,43	0/0:9,0:14:6:0,6,52	0/0:21,0:26:39.03:0,39,404	1/1:17,3:21:29.54:250,30,0	./.	0/0:0,0:1:3:0,3,26	0/0:41,0:41:41.10:0,41,336	./.	./.	1/1:28,9:37:32.95:355,33,0	0/0:5,0:5:8.99:0,9,88	0/0:17,0:16:15.37:0,15,125	0/0:8,0:7:5.97:0,6,47	0/0:8,0:8:9.46:0,9,85
chr10	59298586	.	C	CA	2507.92	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-11.939;DP=498;FS=2.933;HRun=4;HaplotypeScore=51.6169;InbreedingCoeff=0.9818;MQ=98.46;MQ0=0;MQRankSum=0.854;QD=36.88;ReadPosRankSum=-1.791;VQSLOD=3.2340;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,108,1189	1/1:0,4:4:12.04:164,12,0	0/0:26,0:26:68.99:0,69,720	0/0:28,0:28:58.32:0,58,688	0/0:8,0:8:24.05:0,24,261	0/0:18,0:18:54.07:0,54,586	0/0:24,0:24:66.16:0,66,728	1/1:1,33:34:99:1294,99,0	0/0:16,0:15:39.09:0,39,433	0/0:14,0:14:39.09:0,39,430	0/0:10,0:10:30.04:0,30,325	0/0:21,0:21:63.11:0,63,698	0/0:13,0:13:33.09:0,33,374	0/0:15,0:15:42.12:0,42,475	0/0:15,0:15:39.11:0,39,442	0/0:12,0:12:33.09:0,33,374	1/1:0,30:30:87.29:1190,87,0	0/0:24,0:24:66.15:0,66,734	0/0:20,0:20:45.12:0,45,510	0/0:9,0:9:27.08:0,27,306	0/0:40,0:40:99:0,111,1237	0/0:7,0:7:21.06:0,21,238	0/0:7,0:7:18.05:0,18,204	0/0:18,0:18:54.14:0,54,603	0/0:15,0:15:42.04:0,42,441	0/0:10,0:10:27.08:0,27,306	0/0:13,0:13:30.08:0,30,340	0/0:10,0:10:24.05:0,24,261
chr10	59298721	.	CCTCTCTCTCTCTCTCT	C	670.24	PASS	AB=0.800;AC=7;AF=0.135;AN=52;BaseQRankSum=2.493;DP=427;FS=9.715;HRun=0;HaplotypeScore=155.9670;InbreedingCoeff=0.5118;MQ=59.29;MQ0=10;MQRankSum=-0.155;QD=9.71;ReadPosRankSum=2.145;VQSLOD=2.2805;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:23,3:25:3.01:94,3,0	./.	0/0:13,0:9:0.47:0,0,1	0/0:23,0:16:8.94:0,9,117	0/1:9,2:11:0:0,0,0	0/0:12,0:11:9.03:0,9,277	0/0:22,0:21:6.02:0,6,123	0/0:24,0:23:3.90:0,4,159	1/1:13,3:16:18.05:453,18,0	0/0:16,0:15:24.08:0,24,1222	0/0:7,0:7:3.01:0,3,107	0/0:11,0:11:6.02:0,6,287	0/0:9,0:9:9.01:0,9,142	0/0:12,0:12:18.04:0,18,651	0/0:19,0:18:12.04:0,12,559	0/0:11,0:10:6.02:0,6,360	0/0:23,0:23:18.03:0,18,455	1/1:13,1:14:1.23:235,1,0	0/0:17,0:16:12.04:0,12,465	./.	0/0:19,0:18:12.04:0,12,716	0/0:12,0:12:5.99:0,6,297	0/0:7,0:7:1.82:0,2,5	0/0:18,0:17:15.05:0,15,421	0/0:17,0:17:9.03:0,9,465	0/0:20,0:20:24.08:0,24,1510	0/0:13,0:13:18.06:0,18,845	0/0:21,0:20:30.57:0,31,1283
chr10	59298776	.	GTGTGTA	G	1383.59	PASS	AB=1.000;AC=27;AF=0.519;AN=52;BaseQRankSum=-6.833;DP=476;FS=8.861;HRun=0;HaplotypeScore=114.2762;InbreedingCoeff=0.0445;MQ=45.92;MQ0=24;MQRankSum=-2.573;QD=4.06;ReadPosRankSum=-2.098;VQSLOD=1.3659;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:13,24:34:2.68:49,3,0	0/0:9,0:9:1.23:0,1,3	./.	./.	1/1:7,14:20:0.47:1,0,0	1/1:10,0:9:8.98:114,9,0	0/1:26,0:24:2.86:10,0,3	1/1:32,0:31:81.28:578,81,0	1/1:7,7:10:0.42:1,0,0	0/1:18,0:16:56.09:56,0,467	0/0:12,0:11:6.02:0,6,95	0/0:19,0:16:4.66:0,5,12	0/0:19,0:19:0.22:0,0,0	0/1:16,0:16:45.99:46,0,153	0/0:17,0:16:2.49:0,2,301	0/1:15,0:14:6.03:6,0,177	1/1:21,0:20:3.01:33,3,0	1/1:4,12:16:17.91:347,18,0	0/1:15,0:15:89.70:90,0,209	1/1:14,0:14:5.64:36,6,0	0/1:24,0:20:33.17:33,0,258	0/1:13,0:12:0.09:1,0,0	1/1:12,0:12:0.06:0,0,0	0/0:30,0:27:1.82:0,2,5	0/0:11,0:11:3.90:0,4,44	0/1:21,0:20:42.48:42,0,383	0/1:16,0:15:72.96:73,0,167	0/0:15,0:14:0.08:0,0,259
chr10	59298778	.	GTGTA	G	1690.68	PASS	AB=0.952;AC=32;AF=0.615;AN=52;BaseQRankSum=-6.660;DP=480;FS=26.349;HRun=0;HaplotypeScore=105.8615;InbreedingCoeff=0.0400;MQ=46.12;MQ0=24;MQRankSum=-1.932;QD=4.25;ReadPosRankSum=-3.883;VQSLOD=-0.4929;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:37,0:34:2.81:24,3,0	1/1:9,0:9:2.23:8,2,0	./.	./.	0/0:21,0:20:0.40:0,0,0	1/1:10,0:9:8.98:92,9,0	1/1:26,0:24:8.83:56,9,0	1/1:2,31:32:92.11:736,92,0	1/1:14,0:10:0.42:1,0,0	0/1:18,0:16:74.87:75,0,231	0/0:12,0:11:5.98:0,6,47	1/1:18,1:16:8.90:61,9,0	0/1:19,0:19:0.46:1,0,0	0/1:16,0:16:46.13:46,0,67	0/0:17,0:16:0.61:0,1,124	0/1:14,0:13:10.23:10,0,73	1/1:1,20:20:3.01:52,3,0	1/1:16,0:16:17.91:246,18,0	0/1:15,0:15:95.45:109,0,95	1/1:14,0:14:8.74:60,9,0	0/1:24,0:20:42.59:43,0,114	0/1:13,0:12:0.09:0,0,0	0/1:1,11:12:0:1,0,0	1/1:30,0:27:2.96:19,3,0	0/0:13,0:13:3.73:0,4,17	0/1:21,0:20:88.17:88,0,194	0/1:17,0:16:59.75:97,0,60	0/0:15,0:14:0.06:0,0,140
chr10	59298780	.	GTA	G	2070.43	PASS	AB=0.917;AC=42;AF=0.808;AN=52;BaseQRankSum=-3.090;DP=478;FS=15.975;HRun=0;HaplotypeScore=97.8427;InbreedingCoeff=0.1557;MQ=46.33;MQ0=24;MQRankSum=0.850;QD=4.73;ReadPosRankSum=-2.373;VQSLOD=1.1688;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:37,0:34:2.99:24,3,0	1/1:0,9:9:2.96:19,3,0	./.	./.	0/0:21,0:20:0.02:0,0,0	1/1:9,0:8:8.97:75,9,0	1/1:3,21:22:6.02:88,6,0	1/1:32,0:31:92.11:673,92,0	1/1:14,0:10:0.42:1,0,0	0/1:18,0:16:15.54:105,0,16	1/1:11,0:10:0.47:1,0,0	1/1:4,15:16:9.03:134,9,0	0/1:0,19:19:0.10:0,0,0	1/1:16,0:16:8.81:67,9,0	1/1:18,0:17:8.43:65,8,0	1/1:13,0:13:6.10:42,6,0	1/1:21,0:20:3.01:35,3,0	1/1:15,0:15:15.84:146,16,0	0/1:15,0:15:1.84:124,0,2	1/1:15,0:15:11.85:81,12,0	1/1:26,0:22:14.57:112,15,0	0/0:1,12:12:0:0,0,1	0/1:12,0:12:0.11:0,0,0	1/1:3,27:27:3.01:44,3,0	1/1:14,0:14:1.62:23,2,0	0/1:21,0:20:24.34:163,0,24	1/1:17,0:16:22.04:149,22,0	0/1:12,0:11:3.66:4,0,25
chr10	59298786	.	G	GTA	1419.59	PASS	AB=0.881;AC=14;AF=0.250;AN=56;BaseQRankSum=-0.835;DP=482;FS=56.746;HRun=0;HaplotypeScore=96.8064;InbreedingCoeff=-0.0200;MQ=47.85;MQ0=21;MQRankSum=4.685;QD=7.84;ReadPosRankSum=3.229;VQSLOD=1.2276;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:34:5.72:0,6,41	0/0:9,0:9:2.70:0,3,34	0/0:2,0:1:3:0,3,29	0/0:9,0:3:8.98:0,9,87	0/0:22,0:21:2.84:0,3,21	0/0:9,0:9:11.46:0,11,78	0/0:23,0:21:10.02:0,10,60	0/0:33,0:32:6.17:0,6,233	0/0:14,0:11:5.88:0,6,37	0/1:10,8:17:85.06:214,0,85	1/1:10,0:10:2.80:46,3,0	0/0:17,0:14:4.93:0,5,14	0/0:21,0:21:5.78:0,6,49	0/1:14,1:15:22.33:126,0,22	1/1:18,0:17:1.90:223,2,0	0/1:15,0:14:27.84:86,0,28	0/0:21,0:20:3.01:0,3,30	0/0:15,0:15:22.54:0,23,120	0/1:12,3:16:99:101,0,138	0/1:14,0:14:27.52:37,0,28	0/1:26,0:22:13.54:273,0,14	0/0:12,0:12:0.20:0,0,0	0/0:11,0:11:0:0,0,0	0/0:32,0:29:4.75:0,5,26	0/0:7,7:14:2.66:0,3,22	0/1:9,0:21:99:198,0,107	0/1:17,0:16:76.77:77,0,115	1/1:9,0:8:13.79:181,14,0
chr10	59300605	.	T	TGGCCTGTACCA	23326.96	PASS	AB=0.967;AC=45;AF=0.804;AN=56;BaseQRankSum=-8.979;DP=437;FS=95.410;HRun=0;HaplotypeScore=115.1857;InbreedingCoeff=0.7458;MQ=72.60;MQ0=0;MQRankSum=-11.190;QD=70.05;ReadPosRankSum=-0.896;VQSLOD=1.0548;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:72.21:0,72,2259	1/1:3,0:3:3.01:171,3,0	0/0:15,0:16:32.98:0,33,841	0/0:12,0:11:27.08:0,27,640	0/0:23,0:23:54.18:0,54,1713	1/1:3,2:8:12.04:560,12,0	1/1:6,18:30:66.23:3407,66,0	1/1:1,3:14:39.11:1554,39,0	0/0:27,0:27:75.23:0,75,2368	1/1:1,5:14:39.10:1324,39,0	1/1:3,2:8:2.84:106,3,0	1/1:4,4:16:21.07:1074,21,0	1/1:3,3:13:20.98:1191,21,0	1/1:4,9:19:30.10:1660,30,0	1/1:2,8:13:27.09:1541,27,0	1/1:1,6:11:15.05:856,15,0	1/1:2,10:19:27.09:1472,27,0	0/1:28,1:29:93.22:93,0,2485	1/1:1,2:7:18.05:615,18,0	1/1:0,5:8:9.03:513,9,0	1/1:6,9:37:18.06:647,18,0	1/1:1,2:12:6.02:269,6,0	1/1:2,3:9:8.96:288,9,0	1/1:4,6:18:21.07:1197,21,0	1/1:1,7:11:24.08:1237,24,0	1/1:9,4:20:54.14:2059,54,0	1/1:2,6:12:21.07:1146,21,0	1/1:0,2:2:6.02:342,6,0
chr10	59302776	.	G	GTA	3911.21	PASS	AB=0.556;AC=13;AF=0.232;AN=56;BaseQRankSum=-4.345;DP=755;FS=4.446;HRun=0;HaplotypeScore=161.6088;InbreedingCoeff=0.8897;MQ=58.75;MQ0=6;MQRankSum=2.076;QD=22.87;ReadPosRankSum=3.520;VQSLOD=4.4157;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:93.62:0,94,1340	0/0:9,0:9:27.07:0,27,381	0/0:24,0:17:26.24:0,26,389	0/0:20,0:12:12.86:0,13,260	0/0:29,0:29:78.23:0,78,1152	1/1:2,26:28:48.16:799,48,0	1/1:3,25:27:33.04:549,33,0	0/0:51,0:51:99:0,153,2182	0/0:26,0:26:72.24:0,72,1091	0/0:47,0:47:63.34:0,63,630	0/0:17,0:17:23.39:0,23,220	1/1:3,30:33:35.41:602,35,0	1/1:2,21:23:22.20:531,22,0	0/0:25,0:25:41.30:0,41,413	0/0:34,0:34:98.01:0,98,630	0/0:18,0:18:24.18:0,24,286	0/0:26,0:26:75.24:0,75,1110	0/0:15,0:15:15.47:0,15,517	0/0:10,0:9:15.60:0,16,114	0/0:33,0:33:86.76:0,87,604	0/0:55,0:55:99:0,146,959	1/1:2,23:25:35.97:602,36,0	0/1:3,12:15:15.84:325,0,16	1/1:2,17:19:30.10:503,30,0	0/0:26,0:26:63.46:0,63,432	0/0:34,0:34:86.24:0,86,540	0/0:33,0:33:21.29:0,21,496	0/0:12,0:12:24.94:0,25,173
chr10	59303142	.	AACACACACACAC	A	4120.13	PASS	AB=0.832;AC=31;AF=0.620;AN=50;BaseQRankSum=4.264;DP=751;FS=3.329;HRun=0;HaplotypeScore=210.8572;InbreedingCoeff=0.1418;MQ=61.27;MQ0=47;MQRankSum=-5.583;QD=9.20;ReadPosRankSum=-1.671;VQSLOD=2.5296;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:30:21.05:0,21,444	1/1:2,0:6:2.98:77,3,0	./.	./.	0/0:6,0:8:12.14:0,12,279	0/1:11,0:17:23.48:23,0,115	0/1:37,0:45:36.95:96,0,37	./.	0/0:10,0:12:3:0,3,25	1/1:16,6:22:9.40:327,9,0	1/1:7,4:10:6.02:114,6,0	0/1:14,0:15:0:0,0,0	0/1:10,0:12:21.62:68,0,22	1/1:10,9:20:8.61:289,9,0	1/1:12,9:20:11.11:440,11,0	1/1:7,6:13:15.05:442,15,0	1/1:18,0:43:15.03:346,15,0	0/0:11,0:15:24.05:0,24,419	1/1:19,4:17:10.26:336,10,0	0/1:11,9:18:3.05:70,0,3	0/1:65,0:66:49.12:162,0,49	0/1:13,1:11:41.77:42,0,118	0/0:15,0:17:9.13:0,9,68	0/1:33,0:35:55.11:55,0,156	0/1:6,9:17:46.87:47,0,47	1/1:8,5:13:22.26:616,22,0	1/1:16,2:16:2.97:245,3,0	1/1:3,6:8:0.82:324,1,0
chr10	59305408	.	G	GTT	5352.81	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-0.376;DP=682;FS=0.756;HRun=4;HaplotypeScore=133.2993;InbreedingCoeff=0.9859;MQ=81.17;MQ0=0;MQRankSum=-3.459;QD=32.84;ReadPosRankSum=-3.864;VQSLOD=2.9009;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,111,1478	0/0:10,0:10:26.45:0,26,159	0/0:21,0:21:60.20:0,60,791	0/0:16,0:16:28.19:0,28,435	0/0:32,0:32:84.23:0,84,1073	1/1:0,19:19:33.11:565,33,0	1/1:3,14:17:39.13:664,39,0	0/0:41,0:41:21.91:0,22,493	0/0:23,0:23:54.16:0,54,703	0/0:23,0:23:31.81:0,32,320	0/0:21,0:21:32.91:0,33,331	1/1:5,18:23:46.04:773,46,0	1/1:5,21:25:60.13:923,60,0	0/0:27,0:27:58.64:0,59,351	0/0:39,0:39:92.53:0,93,557	0/0:31,0:31:76.12:0,76,444	0/0:25,0:25:37.96:0,38,333	0/0:17,0:17:48.16:0,48,638	0/0:22,0:22:23.50:0,23,263	0/0:23,0:23:35.84:0,36,343	0/0:29,0:29:8.19:0,8,397	1/1:4,23:27:55.83:857,56,0	1/1:4,17:21:55.79:748,56,0	1/1:2,27:30:47.88:823,48,0	0/0:24,0:23:40.52:0,41,375	0/0:21,0:21:48.17:0,48,279	0/0:24,0:24:61.70:0,62,388	0/0:11,0:11:32.44:0,32,203
chr10	59305848	.	C	CA	2162.68	PASS	AB=0.906;AC=27;AF=0.482;AN=56;BaseQRankSum=5.991;DP=542;FS=0.876;HRun=15;HaplotypeScore=71.9999;InbreedingCoeff=0.5605;MQ=46.40;MQ0=23;MQRankSum=0.746;QD=6.82;ReadPosRankSum=1.546;VQSLOD=2.8523;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:38:32.57:0,33,262	0/1:11,1:11:32.30:32,0,43	0/0:2,0:1:2.80:0,3,13	0/0:4,0:2:1.55:0,2,4	0/0:27,0:23:37.26:0,37,220	0/0:23,0:22:23.51:0,24,157	0/1:11,4:13:49.76:50,0,77	0/1:17,1:14:2.37:2,0,70	0/0:19,0:18:27.65:0,28,139	1/1:23,0:20:23.07:178,23,0	0/1:21,0:18:17.98:128,0,18	0/0:14,0:16:24.10:0,24,132	0/0:11,0:11:12.98:0,13,76	1/1:18,0:17:13.62:135,14,0	1/1:20,0:20:46.69:289,47,0	1/1:25,0:25:15.50:201,15,0	0/0:28,0:24:3.51:0,4,177	0/0:15,1:17:2.87:0,3,115	1/1:17,0:13:34.32:140,34,0	1/1:28,0:28:62.19:313,62,0	1/1:9,0:6:10.98:47,11,0	0/1:10,2:9:34.64:35,0,40	0/0:16,0:16:23.42:0,23,144	0/0:18,0:18:18.46:0,18,107	1/1:22,1:23:44.82:227,45,0	1/1:25,0:23:30.57:180,31,0	1/1:25,0:25:45.88:255,46,0	1/1:20,0:17:33.42:151,33,0
chr10	59305860	.	A	AG	6194.35	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-7.825;DP=555;FS=0.753;HRun=0;HaplotypeScore=60.8453;InbreedingCoeff=0.9663;MQ=52.94;MQ0=9;MQRankSum=2.411;QD=23.73;ReadPosRankSum=4.582;VQSLOD=5.8694;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:45:75.81:0,76,931	0/0:10,0:9:13.18:0,13,170	0/0:8,0:5:11.80:0,12,94	0/0:9,0:5:5.97:0,6,49	0/0:30,0:26:48.02:0,48,573	0/0:20,0:20:50.83:0,51,537	0/0:17,0:15:24.50:0,24,319	0/0:19,0:13:35.13:0,35,341	0/0:17,0:17:39.02:0,39,426	1/1:2,19:23:57.88:583,58,0	1/1:11,11:20:40.16:407,40,0	0/0:19,0:19:53.83:0,54,517	0/0:11,0:11:32.99:0,33,335	1/1:1,15:16:29.31:356,29,0	1/1:0,18:18:48.14:566,48,0	1/1:2,19:21:10.59:535,11,0	0/0:27,0:23:41.54:0,42,546	0/0:13,0:13:33.43:0,33,415	1/1:0,21:21:59.84:612,60,0	1/1:1,28:32:80.65:827,81,0	1/1:3,7:8:12.02:147,12,0	0/0:16,0:16:33.86:0,34,353	0/0:15,0:15:35.99:0,36,419	0/0:16,0:16:21.53:0,22,267	1/1:2,18:22:49.77:504,50,0	1/1:1,24:23:64.89:723,65,0	1/1:6,24:29:44.98:534,45,0	1/1:2,15:17:35.94:401,36,0
chr10	59309123	.	GCGCACACACACACA	G	2016.30	PASS	AB=1.000;AC=23;AF=0.460;AN=50;BaseQRankSum=4.126;DP=275;FS=11.425;HRun=0;HaplotypeScore=111.9951;InbreedingCoeff=0.7205;MQ=67.19;MQ0=8;MQRankSum=-2.963;QD=20.57;ReadPosRankSum=0.354;VQSLOD=1.4584;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:1,0:19:2.55:0,3,16	./.	1/1:7,0:4:7.62:31,8,0	0/1:14,0:9:0.70:1,0,31	0/0:4,0:7:9.35:0,9,90	0/0:8,0:8:24.02:0,24,794	0/0:22,0:22:50.71:0,51,1828	0/0:19,0:17:40.21:0,40,539	0/0:2,0:7:2.84:0,3,37	1/1:2,4:6:11.98:270,12,0	./.	0/0:9,0:9:24.07:0,24,1109	0/0:4,0:4:12.01:0,12,395	1/1:0,2:3:6.02:178,6,0	1/1:1,10:11:3:128,3,0	1/1:0,3:3:3.01:129,3,0	0/0:21,0:21:49.95:0,50,997	0/0:1,0:16:18.06:0,18,314	1/1:2,6:9:14.01:422,14,0	./.	1/1:15,0:13:11.80:82,12,0	0/0:8,0:7:12.03:0,12,367	0/0:9,0:9:9.03:0,9,486	0/0:19,0:19:44.93:0,45,2116	1/1:1,8:8:2.99:109,3,0	1/1:2,3:4:8.84:163,9,0	1/1:1,6:7:9.03:385,9,0	1/1:0,8:9:9.03:297,9,0
chr10	59309125	.	GCACACA	G	1345.13	PASS	AB=0.849;AC=29;AF=0.580;AN=50;BaseQRankSum=4.795;DP=272;FS=0.000;HRun=0;HaplotypeScore=91.5429;InbreedingCoeff=0.3903;MQ=66.79;MQ0=9;MQRankSum=-5.005;QD=8.30;ReadPosRankSum=0.724;VQSLOD=1.8808;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:19:2.92:44,3,0	./.	0/0:8,0:4:1.55:0,2,4	0/0:13,0:9:2.92:0,3,17	1/1:6,0:7:2.64:48,3,0	0/0:7,0:7:12.04:0,12,276	0/0:19,0:20:26.17:0,26,620	0/1:13,7:18:0.34:211,0,0	1/1:8,0:7:2.68:11,3,0	1/1:5,0:5:3.01:42,3,0	./.	0/0:9,0:9:21.02:0,21,425	0/0:5,0:4:6.02:0,6,171	1/1:3,0:3:3.01:41,3,0	1/1:10,0:10:3.01:41,3,0	1/1:3,0:3:3.01:42,3,0	0/1:16,4:21:15.32:324,0,15	0/1:18,0:17:38.78:290,0,39	1/1:9,0:9:8.72:124,9,0	./.	0/0:13,0:13:0.47:0,0,1	1/1:2,1:7:2.66:5,3,0	0/0:7,0:8:9.03:0,9,167	0/0:19,0:19:33.10:0,33,828	1/1:10,0:9:2.95:26,3,0	1/1:5,0:4:3.01:42,3,0	1/1:7,0:7:8.77:124,9,0	1/1:9,0:9:8.95:80,9,0
chr10	59309187	.	TTAA	T	585.37	PASS	AC=8;AF=0.174;AN=46;BaseQRankSum=2.506;DP=220;FS=3.594;HRun=0;HaplotypeScore=53.2635;InbreedingCoeff=0.4561;MQ=65.88;MQ0=3;MQRankSum=0.648;QD=11.04;ReadPosRankSum=1.061;VQSLOD=2.8720;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:12:24.08:0,24,314	1/1:0,1:1:3.01:40,3,0	./.	./.	0/0:3,0:7:12.04:0,12,157	0/0:7,0:7:15.03:0,15,252	0/0:5,0:5:3.01:0,3,58	1/1:27,0:26:6.02:76,6,0	0/0:2,0:3:3.01:0,3,39	0/0:4,0:4:6.02:0,6,114	0/0:5,0:5:6.02:0,6,115	./.	0/0:3,0:3:3.01:0,3,58	1/1:2,2:4:6.02:79,6,0	0/0:4,0:4:6.02:0,6,95	0/0:6,0:6:6.02:0,6,115	1/1:6,15:21:39.13:515,39,0	0/0:20,1:21:2.53:0,3,678	0/0:7,0:7:3.01:0,3,58	./.	0/0:3,0:3:9.03:0,9,164	0/0:7,0:7:6.02:0,6,108	./.	0/0:5,0:5:3.01:0,3,58	0/0:10,0:10:15.05:0,15,288	0/0:5,0:5:3.01:0,3,58	0/0:7,0:7:12.04:0,12,227	0/0:4,0:4:6.02:0,6,115
chr10	59310302	.	A	AAT	7258.36	PASS	AB=1.000;AC=45;AF=0.804;AN=56;BaseQRankSum=-6.724;DP=568;FS=5.480;HRun=0;HaplotypeScore=95.5591;InbreedingCoeff=0.8097;MQ=66.28;MQ0=9;MQRankSum=2.905;QD=16.80;ReadPosRankSum=7.497;VQSLOD=3.7782;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:23.98:0,24,255	1/1:0,6:6:5.90:61,6,0	0/0:43,0:14:7.89:0,8,226	0/0:14,0:5:0.46:0,0,2	0/0:35,0:35:38.53:0,39,342	1/1:19,1:20:39.85:223,40,0	1/1:15,0:15:28.54:178,29,0	1/1:5,29:37:72.28:1169,72,0	0/1:9,0:9:0.70:1,0,128	1/1:24,0:24:68.27:499,68,0	1/1:22,0:22:55.95:401,56,0	1/1:10,0:10:13.23:63,13,0	1/1:16,1:17:34.33:202,34,0	1/1:12,0:12:17.93:143,18,0	1/1:16,0:16:31.66:237,32,0	1/1:29,0:29:65.72:525,66,0	1/1:4,28:33:28.19:705,28,0	0/0:16,0:17:13.08:0,13,128	1/1:27,0:26:64.12:455,64,0	1/1:13,0:13:32.43:279,32,0	1/1:12,0:12:32.12:226,32,0	1/1:8,0:8:14.22:72,14,0	1/1:26,0:26:5.27:161,5,0	1/1:12,0:12:25.48:122,25,0	1/1:22,0:22:53.85:433,54,0	1/1:20,0:20:56.07:402,56,0	1/1:27,0:26:59.28:469,59,0	1/1:15,0:15:12.10:230,12,0
chr10	59310303	.	A	ATT	9567.16	PASS	AB=0.754;AC=28;AF=0.500;AN=56;BaseQRankSum=-13.969;DP=563;FS=12.854;HRun=0;HaplotypeScore=87.3641;InbreedingCoeff=0.5887;MQ=66.28;MQ0=9;MQRankSum=1.394;QD=29.08;ReadPosRankSum=3.374;VQSLOD=6.1884;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:62.12:0,62,709	1/1:5,0:5:0.44:17,0,0	0/0:44,0:15:22.12:0,22,311	0/0:13,0:4:2.45:0,2,15	0/0:35,0:35:83.87:0,84,937	0/0:1,0:20:0.54:0,1,19	0/0:3,0:15:1.55:0,2,55	0/1:36,0:36:50.44:335,0,50	0/0:9,0:9:25.22:0,25,312	1/1:0,23:24:69.69:1090,70,0	1/1:1,21:23:57.03:832,57,0	0/0:0,0:10:8.15:0,8,25	0/1:2,0:18:5.33:5,0,13	1/1:0,11:12:18.06:293,18,0	1/1:0,14:15:33.11:519,33,0	1/1:0,27:29:66.18:1048,66,0	0/1:31,0:32:15.53:277,0,16	0/0:17,0:17:12.50:0,13,248	1/1:2,20:25:51.69:991,52,0	1/1:1,12:15:33.06:502,33,0	1/1:0,10:12:33.11:507,33,0	0/0:1,0:7:6.23:0,6,14	0/0:5,0:25:32.22:0,32,155	0/0:0,0:12:11.16:0,11,25	1/1:0,21:22:54.18:880,54,0	1/1:0,16:19:57.19:863,57,0	1/1:1,22:25:60.20:952,60,0	0/1:1,13:15:7.66:456,0,8
chr10	59310666	.	CGT	C	1098.38	PASS	AB=0.836;AC=16;AF=0.286;AN=56;BaseQRankSum=11.155;DP=588;FS=59.182;HRun=0;HaplotypeScore=144.5671;InbreedingCoeff=-0.4082;MQ=50.41;MQ0=16;MQRankSum=-6.254;QD=3.69;ReadPosRankSum=-2.514;VQSLOD=0.6983;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:98.20:0,98,1836	0/1:6,3:8:77.07:77,0,107	0/0:54,0:24:62.95:0,63,1174	0/0:41,0:20:54.40:0,54,1045	0/0:24,0:24:39.13:0,39,754	0/1:22,3:25:22.15:22,0,928	0/1:16,9:25:99:125,0,299	0/1:18,5:21:85.88:86,0,610	0/0:20,0:20:60.21:0,60,1202	0/1:9,1:9:87.60:88,0,338	0/1:20,5:24:57.31:57,0,457	0/0:16,1:15:18.05:0,18,331	0/0:10,1:11:18.95:0,19,311	0/1:10,4:12:58.07:85,0,58	0/1:16,0:16:59.76:60,0,210	0/1:14,6:19:42.74:43,0,345	0/1:20,4:24:99:118,0,497	0/0:16,1:17:31.95:0,32,795	0/1:17,5:21:99:140,0,831	0/0:10,6:15:20.87:0,21,424	0/0:15,1:16:5.98:0,6,122	0/0:14,3:16:12.04:0,12,240	0/0:15,4:19:23.82:0,24,438	0/1:20,3:22:30.14:30,0,119	0/1:7,2:9:11.77:12,0,86	0/1:16,5:19:84.43:84,0,719	0/1:23,4:26:99:155,0,791	0/1:4,1:5:74.02:74,0,107
chr10	59310672	.	T	TCACACACACACACACA	6752.92	PASS	AB=1.000;AC=41;AF=0.788;AN=52;BaseQRankSum=1.947;DP=622;FS=7.189;HRun=0;HaplotypeScore=253.3542;InbreedingCoeff=0.6064;MQ=47.87;MQ0=19;MQRankSum=-4.580;QD=17.32;ReadPosRankSum=-1.440;VQSLOD=2.0809;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:44:39.22:0,39,2318	1/1:12,0:11:15.03:408,15,0	0/0:60,0:25:13.56:0,14,252	0/0:41,0:19:12.04:0,12,286	0/0:28,0:29:1.95:0,2,896	1/1:25,0:25:15.03:368,15,0	1/1:24,0:24:17.70:419,18,0	1/1:19,0:17:15.05:427,15,0	0/0:21,0:21:2.18:0,2,1438	1/1:11,0:10:15.05:422,15,0	1/1:25,0:23:11.24:245,11,0	1/1:13,3:18:1.03:224,1,0	1/1:9,3:18:6.91:284,7,0	1/1:14,0:12:12.04:315,12,0	1/1:14,0:14:10.28:244,10,0	1/1:19,0:18:12:213,12,0	1/1:27,0:27:18.03:506,18,0	0/1:14,0:15:2.99:3,0,1011	1/1:27,0:26:27.66:645,28,0	1/1:15,0:14:2.91:18,3,0	./.	1/1:17,0:16:2.94:18,3,0	./.	1/1:25,0:24:9.91:447,10,0	1/1:7,0:7:3.01:80,3,0	1/1:21,0:19:21.07:633,21,0	1/1:29,0:28:24.08:598,24,0	1/1:6,0:6:9.03:237,9,0
chr10	59310869	.	TCAA	T	2169.85	PASS	AB=0.941;AC=26;AF=0.481;AN=54;BaseQRankSum=-1.589;DP=702;FS=2.380;HRun=0;HaplotypeScore=124.8069;InbreedingCoeff=0.0775;MQ=44.46;MQ0=25;MQRankSum=1.316;QD=4.29;ReadPosRankSum=0.986;VQSLOD=2.5736;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:11,27:36:27.09:375,27,0	0/0:16,0:15:1.85:0,2,28	0/0:26,1:16:6.49:0,6,96	0/0:34,0:14:3.01:0,3,52	1/1:16,1:17:30.10:382,30,0	1/1:21,0:19:4.19:13,4,0	0/1:35,0:32:12.79:13,0,29	1/1:21,0:18:4.80:17,5,0	0/1:13,29:41:4.75:151,0,5	0/0:24,0:23:5.32:0,5,56	0/0:11,0:10:2.93:0,3,38	0/1:32,0:33:7.60:48,0,8	0/1:26,0:23:16.48:21,0,16	1/1:21,0:18:9.37:100,9,0	0/1:28,0:22:37.99:49,0,38	1/1:23,0:19:15.02:146,15,0	0/1:18,0:14:3.59:4,0,10	1/1:30,9:34:69.15:910,69,0	0/0:17,0:12:0.09:0,0,4	0/1:20,0:19:8.41:8,0,42	0/0:34,0:28:8.38:0,8,82	1/1:14,0:12:1.84:4,2,0	0/0:22,0:21:4.22:0,4,23	0/1:51,0:45:53.35:65,0,53	0/0:7,0:7:2.97:0,3,20	0/1:28,0:27:14.03:14,0,101	0/1:22,0:18:7.87:8,0,35	./.
chr10	59310887	.	A	ACAG	4845.80	PASS	AB=0.955;AC=36;AF=0.643;AN=56;BaseQRankSum=-3.555;DP=988;FS=0.396;HRun=0;HaplotypeScore=129.7983;InbreedingCoeff=0.1311;MQ=32.62;MQ0=181;MQRankSum=1.029;QD=6.22;ReadPosRankSum=4.701;VQSLOD=3.3524;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:36:44.86:0,45,374	0/1:7,13:16:1.12:207,0,1	0/1:15,0:6:9.30:9,0,111	0/0:22,0:6:5.07:0,5,103	0/0:33,0:21:25.28:0,25,289	1/1:25,0:15:20.64:133,21,0	1/1:43,0:31:3.88:262,4,0	1/1:22,10:13:4.37:261,4,0	0/0:57,0:47:47.18:0,47,367	1/1:33,0:19:0.99:361,1,0	1/1:20,0:11:5.71:118,6,0	0/1:55,0:34:61.06:213,0,61	0/1:57,0:43:74.41:257,0,74	1/1:27,0:15:23.06:148,23,0	0/1:51,0:31:48.30:130,0,48	1/1:38,0:17:25.19:144,25,0	0/1:27,0:14:8.80:324,0,9	0/0:53,0:41:95.70:0,96,871	1/1:26,0:13:4.14:134,4,0	1/1:30,0:17:21.70:259,22,0	1/1:45,0:28:24.57:441,25,0	0/1:30,0:17:49:109,0,49	1/1:32,0:22:12.40:233,12,0	0/1:75,0:54:29.63:463,0,30	0/1:15,0:10:15.21:15,0,60	1/1:45,0:26:44.61:484,45,0	0/1:32,0:21:54.79:118,0,55	1/1:5,0:2:2.99:23,3,0
chr10	59310896	.	ACAG	A	3980.75	PASS	AB=0.987;AC=31;AF=0.574;AN=54;BaseQRankSum=-1.561;DP=1128;FS=5.001;HRun=0;HaplotypeScore=131.9917;InbreedingCoeff=-0.4248;MQ=28.64;MQ0=233;MQRankSum=4.134;QD=3.69;ReadPosRankSum=3.938;VQSLOD=2.1628;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:51,0:37:99:148,0,111	0/1:20,0:15:25.15:57,0,25	0/0:11,0:3:5.90:0,6,41	0/0:14,0:2:3:0,3,25	0/1:41,0:23:51.06:180,0,51	1/1:24,0:12:11.89:85,12,0	0/1:47,0:30:1.28:227,0,1	0/1:38,0:9:18.94:65,0,19	0/1:63,0:51:65.78:66,0,156	0/1:37,0:16:28.96:218,0,29	0/1:21,1:11:9.64:115,0,10	0/1:71,0:45:99:194,0,181	0/1:74,0:47:98.10:173,0,98	1/1:34,4:23:3.62:271,4,0	0/1:58,2:36:99:214,0,109	1/1:44,5:19:22.06:300,22,0	0/1:31,3:17:12.88:125,0,13	0/1:67,0:51:99:310,0,106	0/1:28,0:10:10.55:79,0,11	1/1:29,0:12:2.86:124,3,0	1/1:53,1:28:1.83:228,2,0	0/1:30,0:16:50.18:79,0,50	1/1:34,0:23:11.27:177,11,0	0/1:86,2:60:99:204,0,163	0/0:18,0:11:3.15:0,3,100	1/1:41,1:20:0.64:249,1,0	0/1:35,1:19:73.65:92,0,74	./.
chr10	59310899	.	GCAA	G	275.71	PASS	AB=0.985;AC=9;AF=0.180;AN=50;BaseQRankSum=2.807;DP=1179;FS=2.651;HRun=0;HaplotypeScore=145.1966;InbreedingCoeff=-0.1466;MQ=27.48;MQ0=257;MQRankSum=-1.616;QD=0.72;ReadPosRankSum=5.316;VQSLOD=1.8259;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:55,1:41:23.45:0,23,330	0/0:19,0:13:1.65:0,2,62	./.	./.	0/1:41,1:24:48.04:48,0,211	0/0:25,0:13:2.36:0,2,16	0/0:51,0:31:16.01:0,16,130	0/0:41,0:9:5.98:0,6,59	0/1:64,2:51:40.86:41,0,425	0/0:35,0:13:3.61:0,4,94	0/0:24,1:12:2.90:0,3,16	0/0:71,0:44:45.93:0,46,485	0/0:74,1:48:30.09:0,30,347	0/1:41,1:22:35.23:85,0,35	0/1:66,0:36:35.41:35,0,231	1/1:57,0:21:1.43:127,1,0	0/1:35,1:17:37.10:37,0,55	0/0:71,1:52:70.72:0,71,598	0/0:28,0:10:3.01:0,3,31	0/1:32,0:11:12.26:12,0,32	0/0:55,0:26:9.19:0,9,72	0/0:33,0:17:16.80:0,17,164	0/0:35,0:23:3.37:0,3,21	0/0:90,0:60:60.21:0,60,578	0/0:19,0:11:18.04:0,18,218	0/1:42,0:18:15.37:15,0,87	0/0:36,0:19:5.65:0,6,196	./.
chr10	59311019	.	GCAATAACAA	G	428.50	PASS	AB=0.955;AC=12;AF=0.231;AN=52;BaseQRankSum=3.480;DP=885;FS=0.000;HRun=0;HaplotypeScore=115.2952;InbreedingCoeff=-0.1054;MQ=21.71;MQ0=230;MQRankSum=-3.012;QD=1.38;ReadPosRankSum=-1.061;VQSLOD=1.7002;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:26:22.08:0,22,887	0/1:7,0:6:7.97:12,0,8	./.	0/0:49,0:9:23.76:0,24,385	0/0:38,0:27:40.69:0,41,1008	0/0:8,0:3:3.01:0,3,36	0/0:16,0:6:3.01:0,3,34	./.	0/0:87,0:64:99:0,109,2726	0/0:29,0:9:7.30:0,7,157	0/1:14,0:5:10.98:11,0,33	0/0:31,0:16:15.38:0,15,284	0/1:37,0:19:22.04:22,0,138	0/1:31,1:12:32.96:38,0,33	0/1:51,2:26:50.19:50,0,546	0/1:44,5:24:99:227,0,115	0/1:26,0:11:1.45:1,0,150	0/0:53,0:37:8.15:0,8,1390	1/1:7,0:2:2.98:21,3,0	0/1:27,1:7:70.05:139,0,70	0/0:50,0:9:3.71:0,4,77	0/0:23,0:7:11.95:0,12,115	0/0:11,0:3:1.55:0,2,4	0/0:43,0:24:11.07:0,11,339	0/0:10,0:4:1.16:0,1,3	0/1:23,0:4:3.96:14,0,4	0/1:30,0:11:25.79:26,0,138	0/0:6,0:3:2.22:0,2,7
chr10	59311020	.	CAAT	C	752.79	PASS	AB=0.938;AC=17;AF=0.327;AN=52;BaseQRankSum=5.115;DP=891;FS=13.203;HRun=0;HaplotypeScore=84.8858;InbreedingCoeff=-0.2030;MQ=21.69;MQ0=231;MQRankSum=-5.138;QD=1.64;ReadPosRankSum=-1.780;VQSLOD=0.3516;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:25:21.74:0,22,585	0/1:10,0:6:5.25:19,0,5	./.	0/0:49,0:9:6.27:0,6,262	0/0:37,1:27:32.97:0,33,654	0/0:9,0:3:3.01:0,3,36	0/0:16,0:6:2.92:0,3,17	./.	0/0:86,1:64:76.89:0,77,1952	0/1:29,1:9:45.69:119,0,46	0/1:14,0:5:2.60:12,0,3	0/0:29,3:16:26.73:0,27,260	0/1:31,8:20:74.58:128,0,75	0/1:24,9:13:38.93:150,0,39	0/1:45,7:25:39.07:39,0,328	0/1:38,11:24:56.38:219,0,56	0/1:25,2:11:48.73:49,0,119	0/1:50,3:37:87.87:88,0,912	0/1:7,0:2:12.98:15,0,13	0/1:28,0:7:0.95:1,0,99	0/1:48,1:9:0.89:1,0,46	0/0:25,0:7:11.86:0,12,97	0/0:9,2:3:1.55:0,2,4	0/0:44,3:27:34.41:0,34,267	0/1:10,0:4:0.46:0,0,1	0/1:23,0:4:13.99:14,0,18	0/1:28,2:11:4.12:4,0,96	1/1:6,0:3:3.01:33,3,0
chr10	59311052	.	ACAG	A	252.26	PASS	AB=0.992;AC=11;AF=0.212;AN=52;BaseQRankSum=0.658;DP=1290;FS=2.955;HRun=0;HaplotypeScore=115.4713;InbreedingCoeff=-0.0906;MQ=19.83;MQ0=353;MQRankSum=-2.611;QD=0.51;ReadPosRankSum=1.566;VQSLOD=2.3039;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:57,0:17:17.31:17,0,80	0/1:22,0:12:22.04:22,0,140	./.	0/0:18,0:5:1.26:0,1,56	0/1:36,1:21:15.03:15,0,108	0/1:22,0:6:11.10:11,0,12	0/1:45,0:13:1.63:2,0,124	1/1:92,0:4:5.91:38,6,0	0/1:80,2:57:99:240,0,198	0/1:45,0:14:29.61:30,0,307	0/0:17,0:5:2.92:0,3,17	0/0:68,0:32:23.68:0,24,575	0/0:60,0:26:28.51:0,29,389	0/0:48,0:19:12.12:0,12,149	0/0:86,0:34:8.76:0,9,307	0/0:65,0:29:30.89:0,31,190	0/0:58,0:24:28.27:0,28,704	0/1:54,1:36:1.52:2,0,260	./.	0/0:31,0:17:17.50:0,17,290	0/0:81,0:13:2.31:0,2,18	0/0:41,0:19:20.97:0,21,306	0/0:26,0:9:6.01:0,6,114	0/0:88,0:52:79.38:0,79,1419	0/0:17,0:10:9:0,9,105	0/1:41,0:12:4.41:4,0,162	0/0:39,0:17:22.16:0,22,183	0/0:17,0:9:6.02:0,6,80
chr10	59311055	.	GCAA	G	724.38	PASS	AB=0.970;AC=13;AF=0.260;AN=50;BaseQRankSum=-2.237;DP=1305;FS=0.000;HRun=0;HaplotypeScore=116.2915;InbreedingCoeff=0.2143;MQ=19.76;MQ0=364;MQRankSum=-1.867;QD=1.45;ReadPosRankSum=1.477;VQSLOD=2.1394;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:60,0:20:9.01:99,9,0	0/1:24,0:12:16.42:16,0,148	./.	./.	0/1:34,0:18:16.41:84,0,16	1/1:22,0:6:3.01:30,3,0	0/0:48,0:12:10.58:0,11,136	1/1:96,0:4:6.02:77,6,0	0/1:65,14:54:48.76:438,0,49	0/1:48,0:18:46.34:46,0,362	0/0:16,0:5:3.01:0,3,37	0/0:67,0:31:23.67:0,24,499	0/0:62,0:28:32.59:0,33,432	0/0:48,0:20:2.70:0,3,174	0/0:85,0:35:15.48:0,15,228	0/0:67,1:30:6.31:0,6,172	0/0:61,0:25:0.05:0,0,611	0/1:56,0:36:64.55:65,0,95	./.	0/0:31,0:17:28.33:0,28,309	1/1:80,1:13:2.74:12,3,0	0/0:38,0:18:18.02:0,18,272	0/0:26,0:9:8.99:0,9,104	0/0:94,0:53:93.23:0,93,1383	0/0:18,0:11:9.03:0,9,138	0/0:43,0:12:15.99:0,16,204	0/0:38,0:16:26.84:0,27,299	0/0:18,0:9:6.02:0,6,96
chr10	59311061	.	A	ACAG	608.08	PASS	AB=0.977;AC=12;AF=0.240;AN=50;BaseQRankSum=-0.335;DP=1345;FS=28.612;HRun=0;HaplotypeScore=123.8179;InbreedingCoeff=-0.2010;MQ=19.43;MQ0=379;MQRankSum=-2.369;QD=1.07;ReadPosRankSum=-1.603;VQSLOD=0.3765;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:63,0:18:17.80:0,18,130	0/0:24,0:12:2.79:0,3,97	./.	./.	0/0:38,0:19:26.65:0,27,177	1/1:25,0:8:2.52:23,3,0	0/0:55,0:16:14.67:0,15,104	0/0:106,0:4:5.02:0,5,28	0/0:72,0:47:14.91:0,15,389	0/1:48,3:21:99:372,0,227	0/0:17,0:5:3:0,3,27	0/1:66,0:32:43.35:43,0,390	0/1:67,0:32:27.08:27,0,292	0/1:53,0:22:36.61:37,0,195	0/1:80,0:31:41.31:41,0,165	0/0:69,0:31:32.46:0,32,237	0/0:61,0:23:8.21:0,8,344	0/0:48,1:31:14.82:0,15,248	./.	0/1:29,3:18:2.98:3,0,238	0/1:85,0:16:13.04:31,0,13	0/0:38,0:19:5.97:0,6,169	0/0:27,0:10:8.98:0,9,99	0/0:102,0:58:61.37:0,61,847	0/1:21,1:14:10.26:10,0,32	0/1:47,1:14:99:139,0,108	0/1:36,1:15:17.93:18,0,225	0/0:23,0:11:8.95:0,9,89
chr10	59311076	.	ACAG	A	640.33	PASS	AB=0.993;AC=14;AF=0.280;AN=50;BaseQRankSum=2.151;DP=1391;FS=1.888;HRun=0;HaplotypeScore=130.9317;InbreedingCoeff=-0.1551;MQ=19.12;MQ0=395;MQRankSum=-1.596;QD=0.82;ReadPosRankSum=-4.468;VQSLOD=1.0147;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:50,0:16:1.64:38,0,2	0/1:30,0:18:12.83:13,0,192	./.	./.	0/1:30,0:12:6.07:49,0,6	1/1:23,1:10:11.79:104,12,0	0/1:69,0:17:28.12:28,0,182	0/1:118,0:5:8.10:28,0,8	0/1:62,0:42:20.84:317,0,21	0/1:61,2:31:73.15:73,0,558	0/0:20,0:7:3.01:0,3,54	0/1:71,1:37:28.39:28,0,618	0/1:71,0:36:15.50:15,0,470	0/0:51,0:21:23.01:0,23,244	0/0:81,0:34:6.37:0,6,248	0/1:66,0:29:21.90:22,0,234	0/0:60,0:23:12.38:0,12,767	0/1:40,2:24:34.39:60,0,34	./.	0/0:31,0:20:34.37:0,34,368	0/1:83,0:17:8.86:9,0,47	0/0:39,0:19:0.43:0,0,296	0/0:29,0:13:6.35:0,6,46	0/0:118,2:67:47.33:0,47,1497	0/0:30,0:17:14.72:0,15,207	0/0:56,0:14:32.40:0,32,363	0/0:37,1:15:30.04:0,30,447	0/0:25,0:13:8.15:0,8,79
chr10	59311085	.	GCAA	G	489.80	PASS	AB=0.954;AC=10;AF=0.192;AN=52;BaseQRankSum=1.145;DP=1406;FS=10.828;HRun=0;HaplotypeScore=142.6740;InbreedingCoeff=-0.1074;MQ=19.32;MQ0=390;MQRankSum=-4.724;QD=1.12;ReadPosRankSum=-3.404;VQSLOD=0.6503;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:18:11.92:0,12,99	0/1:34,0:21:4.39:4,0,261	./.	./.	0/0:26,0:9:6.01:0,6,77	0/1:24,1:8:41.56:60,0,42	0/1:73,0:18:9.25:9,0,187	0/0:129,0:4:3:0,3,60	0/0:55,1:36:5.79:0,6,112	0/1:48,12:36:99:438,0,561	0/0:22,3:10:3.48:0,3,64	0/0:73,0:38:59.35:0,59,788	0/0:79,0:38:29.45:0,29,600	0/1:47,4:21:26.84:27,0,194	0/1:76,1:31:11.97:12,0,176	0/1:63,2:27:3.55:4,0,122	0/0:61,0:24:17.61:0,18,609	0/0:39,2:21:7.81:0,8,54	1/1:29,0:3:2.97:20,3,0	0/0:30,2:25:16.53:0,17,310	0/0:77,0:14:4.17:0,4,155	0/0:40,0:23:24.65:0,25,374	0/0:30,0:16:4.76:0,5,120	0/0:124,0:69:83.01:0,83,1382	0/0:24,11:20:12.29:0,12,265	0/0:58,1:20:47.98:0,48,629	0/0:34,1:16:29.44:0,29,448	0/1:21,1:12:28.61:43,0,29
chr10	59311124	.	ACAACAACAG	A	831.74	PASS	AB=0.981;AC=12;AF=0.240;AN=50;BaseQRankSum=-0.482;DP=1656;FS=0.669;HRun=0;HaplotypeScore=191.4363;InbreedingCoeff=-0.2271;MQ=19.71;MQ0=450;MQRankSum=0.571;QD=1.20;ReadPosRankSum=0.702;VQSLOD=2.7793;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:31,21:23:3.01:52,3,0	0/1:26,0:21:90.36:90,0,163	./.	./.	0/1:25,3:11:52.57:73,0,53	0/0:36,0:13:9.03:0,9,139	0/0:74,0:21:12.04:0,12,234	./.	0/1:61,2:30:72.02:331,0,72	0/0:98,0:52:54.24:0,54,1337	0/0:36,0:20:11.97:0,12,155	0/1:88,1:47:99:100,0,470	0/0:83,0:39:38.08:0,38,546	0/1:59,0:24:53.73:54,0,157	0/1:91,0:33:45.91:46,0,273	0/0:86,0:32:19.46:0,19,331	0/1:71,0:26:41.85:42,0,115	0/1:50,1:24:92.81:120,0,93	0/0:46,0:10:11.89:0,12,152	0/0:61,0:42:16.11:0,16,510	0/0:97,0:26:3.93:0,4,372	0/0:45,0:19:1.48:0,1,206	0/0:37,0:16:3.94:0,4,192	0/1:121,0:63:1.92:2,0,327	0/1:40,0:28:56.62:57,0,95	0/0:78,0:28:6.99:0,7,753	0/0:37,0:15:8.31:0,8,128	0/0:26,0:14:0.99:0,1,112
chr10	59311130	.	ACAG	A	486.53	PASS	AB=0.987;AC=14;AF=0.269;AN=52;BaseQRankSum=2.239;DP=1613;FS=2.034;HRun=0;HaplotypeScore=143.4106;InbreedingCoeff=-0.0572;MQ=20.12;MQ0=420;MQRankSum=1.174;QD=0.62;ReadPosRankSum=1.244;VQSLOD=2.5490;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:48,1:20:3:27,3,0	0/1:25,0:19:76.13:76,0,210	./.	./.	0/1:24,0:12:30.30:30,0,33	0/0:35,0:11:8.92:0,9,68	0/0:74,0:21:15:0,15,234	1/1:108,0:5:8.93:63,9,0	0/1:65,0:32:52.56:154,0,53	0/0:98,0:51:99:0,117,1892	0/0:36,0:21:0.32:0,0,110	0/1:86,0:49:34.61:35,0,474	0/0:79,4:38:10.88:0,11,401	0/0:60,1:28:33.79:0,34,211	0/1:89,3:36:7.47:7,0,288	0/1:93,0:37:26.63:27,0,245	0/0:61,0:18:23.41:0,23,202	0/1:46,3:22:14.05:150,0,14	0/0:43,0:14:4.22:0,4,182	0/0:58,0:43:41.25:0,41,513	0/0:99,0:33:16.27:0,16,376	0/0:40,0:18:32.04:0,32,280	0/0:33,0:17:25.48:0,25,184	0/1:111,2:59:32.32:32,0,477	0/1:39,0:26:0.80:1,0,152	0/0:76,0:27:57.39:0,57,929	0/1:38,1:17:30.11:30,0,96	0/0:27,0:17:20.90:0,21,215
chr10	59311160	.	ACAG	A	173.76	PASS	AB=0.985;AC=9;AF=0.173;AN=52;BaseQRankSum=7.865;DP=1412;FS=0.000;HRun=0;HaplotypeScore=127.3380;InbreedingCoeff=-0.0026;MQ=21.32;MQ0=335;MQRankSum=-5.082;QD=0.43;ReadPosRankSum=-0.976;VQSLOD=2.0942;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:21:18.06:0,18,408	0/1:27,0:19:40.89:41,0,217	./.	./.	0/1:41,1:29:21.43:21,0,799	1/1:35,1:11:5.77:34,6,0	0/0:56,0:15:18.02:0,18,318	0/0:94,0:4:12.04:0,12,241	0/1:60,6:39:99:161,0,1133	0/0:55,0:23:48.79:0,49,868	0/0:23,0:13:9.03:0,9,160	0/1:81,0:50:4.34:4,0,723	0/0:83,1:42:19.89:0,20,1079	0/0:54,0:23:25.64:0,26,658	0/0:97,0:50:49.65:0,50,1135	0/0:76,2:37:13.10:0,13,1070	0/1:46,0:13:29.02:29,0,50	0/0:45,1:23:34.19:0,34,696	0/1:22,0:8:2.85:3,0,304	0/0:54,0:39:45.02:0,45,811	0/0:104,0:43:52.83:0,53,1401	0/0:37,0:22:4.91:0,5,586	0/0:18,0:15:14.73:0,15,438	0/1:82,0:46:5.57:6,0,871	0/0:26,0:15:14.42:0,14,301	0/0:63,0:29:2.65:0,3,1145	0/0:39,0:18:27.56:0,28,553	0/0:24,0:15:4.95:0,5,329
chr10	59311181	.	ACAACAACAG	A	993.58	PASS	AB=0.926;AC=10;AF=0.192;AN=52;BaseQRankSum=4.664;DP=1331;FS=4.365;HRun=0;HaplotypeScore=154.6209;InbreedingCoeff=-0.2499;MQ=21.50;MQ0=346;MQRankSum=-1.488;QD=2.06;ReadPosRankSum=-3.608;VQSLOD=1.2426;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:21:32.98:0,33,954	0/0:24,0:12:24.08:0,24,523	0/0:4,0:1:3.01:0,3,36	./.	0/0:47,0:31:51.64:0,52,1345	./.	0/1:46,0:10:26.83:27,0,107	0/0:91,0:3:3.01:0,3,66	0/0:72,0:44:66.95:0,67,2301	0/1:50,0:18:99:214,0,128	0/1:17,0:8:27.82:28,0,65	0/0:66,0:38:33.10:0,33,737	0/0:74,0:38:60.19:0,60,1148	0/0:52,3:25:36.11:0,36,720	0/1:94,2:49:2.50:2,0,1146	0/1:76,2:40:49.57:50,0,987	0/0:43,0:17:21.04:0,21,233	0/0:49,0:31:44.87:0,45,1228	0/1:24,1:9:99:156,0,219	0/1:33,22:34:78.50:78,0,553	0/0:97,1:43:78.10:0,78,1722	0/0:36,0:23:35.76:0,36,802	0/0:20,0:16:11.60:0,12,398	0/0:62,0:37:40.70:0,41,908	0/0:23,0:13:17.38:0,17,486	0/1:57,5:27:99:443,0,1282	0/1:33,2:16:47.89:48,0,467	0/1:13,6:15:84:84,0,365
chr10	59311244	.	GCAA	G	174.52	PASS	AB=0.992;AC=10;AF=0.200;AN=50;BaseQRankSum=5.174;DP=837;FS=13.498;HRun=0;HaplotypeScore=105.2499;InbreedingCoeff=-0.1088;MQ=23.60;MQ0=231;MQRankSum=-4.637;QD=0.62;ReadPosRankSum=-1.729;VQSLOD=0.4520;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:29:60.19:0,60,1135	1/1:7,0:3:0.46:1,0,0	./.	./.	0/0:31,0:22:10.34:0,10,684	0/0:13,0:5:6.89:0,7,39	0/0:27,0:4:3.01:0,3,36	0/0:53,0:5:12.04:0,12,168	0/0:63,1:43:69.71:0,70,1554	0/0:32,0:14:24.63:0,25,203	./.	0/1:34,0:15:0.18:0,0,81	0/0:36,0:20:25.83:0,26,191	0/1:36,0:16:2.86:3,0,34	0/0:39,1:23:14.72:0,15,177	0/1:47,0:25:29.52:39,0,30	0/0:23,0:7:5.16:0,5,25	0/0:36,0:29:63.15:0,63,1295	0/1:22,0:9:2.21:2,0,95	0/0:24,0:13:11.93:0,12,119	0/1:54,2:24:74.66:81,0,75	0/0:20,0:8:5.19:0,5,27	0/0:14,0:8:3.69:0,4,24	0/1:38,0:22:8.25:58,0,8	0/1:10,0:6:18.18:18,0,81	0/0:56,0:22:37.24:0,37,471	0/1:31,1:17:85.29:85,0,102	0/0:17,0:4:2.74:0,3,12
chr10	59311247	.	ACAG	A	759.68	PASS	AB=0.979;AC=24;AF=0.480;AN=50;BaseQRankSum=7.478;DP=834;FS=3.759;HRun=0;HaplotypeScore=104.0459;InbreedingCoeff=-0.2443;MQ=24.13;MQ0=225;MQRankSum=-7.736;QD=1.35;ReadPosRankSum=-1.972;VQSLOD=1.7178;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:31:66.15:0,66,1196	1/1:8,0:3:2.98:21,3,0	./.	./.	0/1:29,2:21:14.35:14,0,648	0/1:14,0:5:19.89:20,0,27	0/0:31,0:8:4.82:0,5,40	0/0:50,1:5:12.02:0,12,182	0/0:61,4:42:38.72:0,39,1586	0/1:29,0:13:61.90:62,0,94	./.	0/1:35,0:15:19.79:20,0,72	0/1:36,0:21:22.89:23,0,77	1/1:36,1:19:12.68:85,13,0	0/1:38,0:21:43.06:43,0,60	0/1:45,1:25:18.58:153,0,19	0/1:24,0:8:7.08:7,0,8	0/0:34,1:29:58.77:0,59,1228	0/1:22,0:8:42.57:43,0,43	0/0:23,0:14:2.08:0,2,34	0/1:57,0:24:31.54:38,0,32	1/1:19,0:7:2.80:13,3,0	1/1:13,0:7:8.77:54,9,0	0/1:36,3:23:46.15:117,0,46	0/1:10,1:7:38.15:38,0,82	0/1:55,0:23:12.17:12,0,340	0/1:28,2:16:44.03:141,0,44	1/1:17,0:4:2.50:9,2,0
chr10	59311262	.	ACAG	A	2170.10	PASS	AB=0.911;AC=25;AF=0.481;AN=52;BaseQRankSum=7.207;DP=922;FS=26.363;HRun=0;HaplotypeScore=118.3599;InbreedingCoeff=-0.3051;MQ=24.08;MQ0=237;MQRankSum=-6.518;QD=2.98;ReadPosRankSum=-1.836;VQSLOD=0.0545;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:28:60.05:0,60,1179	0/0:11,0:6:2.94:0,3,18	./.	./.	0/1:30,0:19:3.63:4,0,618	0/1:18,3:9:60.33:129,0,60	0/0:35,0:7:4.91:0,5,103	0/1:67,0:7:7.02:7,0,91	0/0:66,0:43:92.88:0,93,1784	0/1:26,5:13:99:255,0,100	0/1:20,2:6:10.16:14,0,10	0/1:36,2:17:76.73:77,0,88	0/1:38,1:22:73.40:73,0,164	1/1:34,10:23:38.63:311,39,0	0/1:30,12:25:82.33:228,0,82	0/1:33,11:26:17.03:277,0,17	0/1:26,0:12:4.10:38,0,4	0/0:41,0:33:77.99:0,78,1341	0/1:18,4:10:58.51:181,0,59	0/1:20,2:9:6.05:6,0,46	0/1:58,5:29:65.17:65,0,183	1/1:21,2:9:3.01:51,3,0	1/1:18,2:12:8.41:89,8,0	0/1:49,4:30:96.70:97,0,118	0/1:11,1:6:1.54:2,0,74	0/1:54,6:23:99:210,0,297	0/1:31,5:19:99:158,0,159	1/1:11,3:4:3.01:50,3,0
chr10	59311265	.	G	GCAA	793.63	PASS	AB=0.975;AC=16;AF=0.308;AN=52;BaseQRankSum=4.813;DP=929;FS=30.376;HRun=0;HaplotypeScore=133.1702;InbreedingCoeff=0.0990;MQ=24.18;MQ0=238;MQRankSum=-6.608;QD=1.70;ReadPosRankSum=-4.070;VQSLOD=-0.3792;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:28:42.54:0,43,824	0/0:13,0:8:3:0,3,29	./.	./.	0/0:30,0:19:33.92:0,34,474	0/0:21,0:9:6.29:0,6,85	0/0:36,0:8:6.49:0,6,84	0/0:65,0:7:0.46:0,0,1	0/0:65,1:44:61.88:0,62,1288	0/1:32,0:14:23.46:23,0,129	0/0:22,0:6:2.84:0,3,27	0/1:37,2:18:75.41:113,0,75	0/1:38,3:24:99:103,0,175	1/1:41,4:22:17.04:259,17,0	0/1:43,1:26:70.56:104,0,71	0/1:42,2:26:47.70:103,0,48	1/1:26,0:12:8.22:70,8,0	0/0:42,0:33:76.52:0,77,1075	0/0:21,0:10:20.98:0,21,152	0/0:20,0:8:7.57:0,8,78	0/1:65,0:29:1.62:2,0,158	1/1:23,0:9:2.80:13,3,0	1/1:23,0:14:2.15:11,2,0	0/1:49,1:30:99:117,0,115	0/0:11,0:5:11.38:0,11,116	0/0:60,0:23:18.82:0,19,231	0/1:35,0:18:25.48:25,0,168	0/0:14,0:4:2.74:0,3,12
chr10	59311268	.	ACAG	A	932.80	PASS	AB=0.989;AC=21;AF=0.404;AN=52;BaseQRankSum=9.183;DP=959;FS=11.123;HRun=0;HaplotypeScore=126.2873;InbreedingCoeff=-0.2387;MQ=24.34;MQ0=242;MQRankSum=-6.793;QD=1.34;ReadPosRankSum=0.583;VQSLOD=1.8906;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:31:59.54:0,60,1147	0/0:13,0:8:2.94:0,3,18	./.	./.	0/0:28,0:17:16.04:0,16,540	0/1:21,0:9:23.44:23,0,82	0/0:38,1:8:4.91:0,5,101	0/1:67,0:8:10.77:11,0,26	0/0:66,0:44:98.59:0,99,1800	0/1:33,0:14:15.98:16,0,184	0/1:22,0:7:10.83:11,0,41	0/1:40,3:21:72.69:78,0,73	0/1:40,1:24:90.30:90,0,208	1/1:46,0:23:36.20:301,36,0	0/1:45,0:27:27.71:143,0,28	0/1:43,1:26:71.95:125,0,72	1/1:27,0:13:6.95:42,7,0	0/0:44,1:35:43.47:0,43,1305	0/1:22,1:11:33.91:34,0,86	0/0:20,0:8:10.58:0,11,154	0/1:64,1:29:72.67:73,0,91	1/1:26,0:11:2.84:15,3,0	0/1:24,0:15:1.90:2,0,32	0/1:54,0:32:23.08:23,0,102	0/0:11,0:5:11.71:0,12,161	0/1:61,0:24:58.83:59,0,322	0/1:35,0:18:39.57:40,0,167	0/1:17,0:8:3.09:3,0,31
chr10	59311271	.	GCAA	G	1187.27	PASS	AB=0.936;AC=14;AF=0.269;AN=52;BaseQRankSum=8.363;DP=978;FS=8.372;HRun=0;HaplotypeScore=134.4285;InbreedingCoeff=-0.2427;MQ=24.76;MQ0=243;MQRankSum=-7.127;QD=2.22;ReadPosRankSum=1.041;VQSLOD=1.8775;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:29:60.03:0,60,1059	0/0:13,0:8:3.01:0,3,38	./.	./.	0/0:29,0:18:26.30:0,26,512	0/1:20,0:8:64.11:64,0,74	0/0:40,0:8:4.91:0,5,112	0/0:69,0:9:13.44:0,13,82	0/0:66,1:48:99:0,99,1662	0/1:34,0:15:21.14:21,0,196	0/1:24,3:12:30.20:30,0,99	0/1:44,0:21:58.42:58,0,93	0/1:43,1:27:82.28:82,0,256	1/1:33,13:23:35.87:331,36,0	0/1:36,12:29:69.72:123,0,70	0/1:38,7:28:40.80:177,0,41	0/0:24,1:11:5.11:0,5,22	0/1:44,0:34:6.22:6,0,1071	0/1:22,1:11:57.10:79,0,57	0/0:21,1:9:11.06:0,11,173	0/1:60,4:31:52.69:134,0,53	0/0:28,0:13:16.84:0,17,102	0/0:26,0:15:14.31:0,14,109	0/0:53,1:33:4.61:0,5,164	0/0:12,1:5:4.78:0,5,145	0/1:55,6:25:99:157,0,283	0/1:30,5:18:73.15:73,0,113	0/0:17,0:8:4.57:0,5,51
chr10	59311286	.	ACAG	A	1498.83	PASS	AB=0.987;AC=22;AF=0.423;AN=52;BaseQRankSum=8.431;DP=1042;FS=48.175;HRun=0;HaplotypeScore=152.0724;InbreedingCoeff=-0.4432;MQ=25.47;MQ0=251;MQRankSum=-5.218;QD=1.85;ReadPosRankSum=-1.640;VQSLOD=0.9727;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:30:65.95:0,66,1214	0/0:16,0:9:3.01:0,3,30	./.	./.	0/0:35,0:19:18.22:0,18,577	0/1:17,4:9:41.12:125,0,41	0/1:44,0:10:63.07:63,0,64	0/1:68,0:16:11.23:11,0,93	0/0:65,0:46:99:0,105,1761	0/1:30,0:11:19.15:19,0,198	0/1:25,0:12:5.12:5,0,136	0/1:47,3:29:62.34:62,0,103	0/1:50,1:28:97.98:98,0,194	1/1:49,0:23:22.87:211,23,0	0/1:47,0:31:70.47:132,0,70	0/1:47,0:29:82.66:172,0,83	1/1:26,0:12:11.24:64,11,0	0/0:42,0:32:7.01:0,7,1175	0/1:26,0:9:17.63:61,0,18	0/1:32,0:11:19.81:20,0,164	0/1:67,0:28:15.37:77,0,15	0/1:39,0:19:51.64:53,0,52	0/0:29,0:17:6.58:0,7,81	0/1:60,0:38:70.69:104,0,71	0/1:17,0:7:46.44:46,0,88	0/1:54,0:25:99:181,0,245	0/1:42,0:23:99:131,0,167	0/1:16,0:8:20.53:21,0,54
chr10	59311289	.	GCAA	G	2397.29	PASS	AB=0.891;AC=20;AF=0.385;AN=52;BaseQRankSum=7.082;DP=1046;FS=23.760;HRun=0;HaplotypeScore=152.4491;InbreedingCoeff=-0.2060;MQ=25.83;MQ0=246;MQRankSum=-6.643;QD=3.57;ReadPosRankSum=-2.164;VQSLOD=1.0029;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:33:75.08:0,75,1286	0/0:13,0:9:2.80:0,3,13	./.	./.	0/0:35,0:19:35.29:0,35,543	1/1:20,0:9:3.07:78,3,0	0/0:45,0:11:4.74:0,5,54	0/1:65,1:18:56.76:82,0,57	0/0:65,2:47:90.30:0,90,1694	0/1:32,0:12:12.67:13,0,207	0/1:21,4:12:50.42:50,0,173	0/1:49,0:29:33.19:33,0,118	0/0:52,0:29:10.01:0,10,237	1/1:35,14:24:28.83:377,29,0	0/1:38,10:32:71.19:242,0,71	0/1:33,12:28:76.19:347,0,76	1/1:21,1:12:3.20:34,3,0	0/0:42,0:32:30.64:0,31,1101	0/1:21,3:9:1.45:144,0,1	0/1:29,2:11:58.36:58,0,115	0/1:59,7:28:29.89:177,0,30	0/0:42,0:20:18.43:0,18,134	0/0:28,0:17:8.49:0,8,63	0/1:52,7:38:48.30:48,0,98	0/1:14,4:8:37.75:103,0,38	0/1:44,9:26:99:422,0,136	0/1:32,9:22:99:316,0,166	0/1:15,1:8:28.56:29,0,62
chr10	59311307	.	GCAA	G	1068.57	PASS	AB=0.942;AC=15;AF=0.288;AN=52;BaseQRankSum=7.003;DP=1015;FS=70.717;HRun=0;HaplotypeScore=181.2493;InbreedingCoeff=-0.2770;MQ=28.19;MQ0=209;MQRankSum=-8.095;QD=2.12;ReadPosRankSum=4.161;VQSLOD=0.3265;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:32:57.11:0,57,992	1/1:16,0:10:2.99:27,3,0	./.	./.	0/0:35,0:18:32.99:0,33,467	0/1:21,0:11:16.23:16,0,104	0/0:46,0:15:29.75:0,30,311	0/1:57,0:23:99:162,0,419	0/0:58,0:42:93.22:0,93,1525	0/0:36,1:12:23.84:0,24,278	0/1:24,0:10:6.83:7,0,150	0/1:47,10:39:99:134,0,363	0/1:47,4:32:99:135,0,451	0/1:35,5:21:35.86:114,0,36	0/1:40,7:33:81.46:248,0,81	0/1:42,5:34:99:172,0,180	0/1:23,1:16:15.03:15,0,140	0/0:39,0:30:70.82:0,71,1415	0/0:20,0:10:5.59:0,6,194	0/0:34,0:13:19.41:0,19,193	0/0:59,0:28:21.03:0,21,174	0/0:42,0:21:4.93:0,5,385	0/0:28,0:17:12.02:0,12,150	0/0:70,0:49:53.34:0,53,636	0/1:19,0:8:11.59:12,0,29	0/1:46,2:24:67.82:68,0,226	0/1:37,2:23:79.83:80,0,152	0/1:12,1:8:28.97:29,0,51
chr10	59311346	.	GCAACAA	G	6497.03	PASS	AB=0.730;AC=37;AF=0.661;AN=56;BaseQRankSum=3.940;DP=911;FS=106.896;HRun=0;HaplotypeScore=192.7608;InbreedingCoeff=0.4282;MQ=36.84;MQ0=84;MQRankSum=-3.714;QD=8.84;ReadPosRankSum=2.600;VQSLOD=-0.0699;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:30:62.94:0,63,1071	0/1:10,7:15:9.41:32,0,9	0/0:11,0:10:29.99:0,30,328	0/0:7,0:6:7.27:0,7,147	0/0:36,0:27:54.51:0,55,838	1/1:8,0:13:5.39:25,5,0	0/1:21,0:28:22.25:90,0,22	1/1:24,0:13:11.95:107,12,0	0/0:47,0:40:96.10:0,96,2199	1/1:34,3:22:11.12:649,11,0	1/1:15,1:13:9:114,9,0	1/1:18,0:48:22.24:69,22,0	1/1:30,0:29:5.21:149,5,0	1/1:22,25:35:36.12:690,36,0	1/1:24,25:41:15.15:599,15,0	1/1:16,25:35:39.13:782,39,0	1/1:16,5:17:29.95:457,30,0	0/0:38,0:35:78.17:0,78,1879	1/1:16,14:18:38.81:390,39,0	1/1:29,3:19:1.73:321,2,0	0/1:35,0:26:9.11:146,0,9	0/1:17,0:31:1.39:1,0,33	0/1:18,0:20:0.97:1,0,32	1/1:42,0:56:1.46:105,1,0	1/1:16,2:9:20.98:267,21,0	1/1:38,3:29:21.09:669,21,0	0/1:22,10:24:23.83:714,0,24	0/1:2,11:13:7.57:120,0,8
chr10	59313301	.	G	GAA	3499.68	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=-0.607;DP=655;FS=0.755;HRun=10;HaplotypeScore=83.8117;InbreedingCoeff=0.9118;MQ=70.09;MQ0=0;MQRankSum=1.276;QD=20.96;ReadPosRankSum=-2.345;VQSLOD=2.6131;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,18:23:49.20:683,49,0	1/1:0,0:12:27.92:107,28,0	0/1:11,0:11:7.52:8,0,86	0/0:12,0:13:11.02:0,11,216	1/1:2,25:29:77.57:1002,78,0	0/0:23,0:24:47.78:0,48,540	0/0:17,0:17:42.09:0,42,427	1/1:7,0:25:14:148,14,0	1/1:1,12:14:38.62:539,39,0	0/0:32,0:33:74.83:0,75,740	0/0:18,0:18:45.09:0,45,458	0/0:20,0:21:44.80:0,45,510	0/0:18,0:20:47.53:0,48,451	0/0:22,0:25:53.83:0,54,523	0/0:36,0:36:84.06:0,84,835	0/0:25,1:26:30.16:0,30,681	1/1:6,1:34:62.90:249,63,0	1/1:1,17:19:54.13:763,54,0	0/0:29,0:29:69.08:0,69,693	0/0:24,0:24:63.10:0,63,633	0/0:21,0:21:53.43:0,53,518	0/0:27,0:28:65.87:0,66,723	0/0:30,0:30:55.39:0,55,767	0/0:20,0:20:51.04:0,51,500	0/0:17,0:18:44.81:0,45,432	0/0:31,0:32:77.85:0,78,774	0/0:31,0:32:93.07:0,93,917	0/0:20,0:20:36.01:0,36,359
chr10	59313631	.	CCCTT	C	3554.12	PASS	AB=1.000;AC=26;AF=0.464;AN=56;BaseQRankSum=0.901;DP=497;FS=7.189;HRun=0;HaplotypeScore=123.7970;InbreedingCoeff=0.8639;MQ=74.08;MQ0=0;MQRankSum=-0.379;QD=15.32;ReadPosRankSum=0.375;VQSLOD=3.0433;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:44.96:0,45,475	0/0:5,0:5:12:0,12,152	0/0:19,0:16:17.03:0,17,159	0/0:26,0:22:19.25:0,19,173	0/0:19,0:19:42.02:0,42,497	0/0:26,0:25:7.01:0,7,199	0/0:24,0:23:12.04:0,12,146	0/0:17,0:17:30:0,30,297	0/0:15,0:15:35.39:0,35,359	1/1:14,2:16:30.05:325,30,0	1/1:7,0:7:8.98:74,9,0	0/0:20,0:20:4.76:0,5,224	0/1:22,0:22:1.55:2,0,188	1/1:7,10:17:18.06:303,18,0	1/1:18,1:19:29.94:274,30,0	1/1:17,5:22:48.01:533,48,0	0/0:15,0:15:32.98:0,33,471	0/0:7,0:7:14.99:0,15,173	1/1:13,3:16:30.02:354,30,0	1/1:14,2:16:29.85:280,30,0	1/1:18,4:21:24.01:311,24,0	0/0:22,0:22:29.88:0,30,300	0/1:23,0:23:0.87:1,0,140	0/0:31,0:31:39:0,39,348	1/1:12,1:13:32.99:284,33,0	1/1:12,0:12:33.04:326,33,0	1/1:18,1:19:29.90:285,30,0	1/1:6,2:8:17.99:201,18,0
chr10	59313647	.	TCCTCCCTCCCTC	T	7497.21	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=1.425;DP=442;FS=4.981;HRun=0;HaplotypeScore=172.9061;InbreedingCoeff=0.3932;MQ=55.97;MQ0=9;MQRankSum=-5.727;QD=28.84;ReadPosRankSum=1.061;VQSLOD=4.0245;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:19:23.83:0,24,540	0/0:4,0:4:3.01:0,3,126	0/0:12,0:6:5.05:0,5,44	0/0:12,0:9:2.28:0,2,35	0/0:15,0:14:9.03:0,9,310	1/1:18,7:25:60.17:1514,60,0	1/1:9,14:22:21.07:603,21,0	0/0:18,0:17:26.98:0,27,561	0/0:13,0:13:10.16:0,10,244	0/1:14,0:13:37.18:37,0,46	0/1:6,0:5:21:29,0,21	1/1:16,4:20:39.12:891,39,0	1/1:16,4:20:48.12:1200,48,0	0/0:10,0:10:12.17:0,12,67	0/1:18,0:18:3.59:4,0,142	0/1:20,0:19:5.16:5,0,257	0/0:13,0:14:15.04:0,15,500	0/0:6,0:6:8.99:0,9,191	0/1:16,0:16:36.53:37,0,207	0/1:13,0:13:9.86:10,0,159	0/0:26,0:24:29.92:0,30,384	1/1:15,5:20:42.13:953,42,0	1/1:14,7:21:57.10:1212,57,0	1/1:22,8:30:49.50:984,50,0	0/0:14,0:14:5.84:0,6,34	0/1:14,0:14:18.12:18,0,85	0/0:9,0:9:9.47:0,9,80	0/0:9,0:8:8.97:0,9,81
chr10	59313666	.	TC	T	874.43	PASS	AB=0.956;AC=8;AF=0.143;AN=56;BaseQRankSum=4.377;DP=367;FS=9.596;HRun=3;HaplotypeScore=100.0518;InbreedingCoeff=0.1046;MQ=42.72;MQ0=19;MQRankSum=-4.183;QD=5.79;ReadPosRankSum=4.202;VQSLOD=-0.0478;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:9:15.04:0,15,198	0/0:5,0:3:3.01:0,3,43	0/0:6,0:2:5.61:0,6,46	0/0:4,0:1:1.82:0,2,5	0/0:11,0:10:9.03:0,9,130	1/1:23,2:25:30.18:261,30,0	0/1:16,0:15:6.32:61,0,6	0/0:17,0:15:34:0,34,458	0/0:9,0:8:17.30:0,17,171	0/0:9,0:8:20.90:0,21,207	0/0:4,0:3:3.01:0,3,39	0/1:19,0:19:16.58:65,0,17	0/1:20,0:19:32.08:185,0,32	0/0:13,0:13:25.53:0,26,191	0/0:11,0:11:12:0,12,118	0/0:18,0:17:28.59:0,29,264	0/0:9,0:9:18.06:0,18,255	0/0:4,0:4:7.26:0,7,80	0/0:17,0:15:38.64:0,39,384	0/0:8,0:8:17.95:0,18,191	0/0:31,0:26:30.02:0,30,333	0/1:14,3:17:12.08:163,0,12	0/1:22,0:22:61.20:114,0,61	0/1:28,4:32:99:164,0,107	0/0:6,0:5:9.03:0,9,124	0/0:7,0:7:15.02:0,15,187	0/0:7,0:5:8.93:0,9,79	0/0:8,0:7:14.94:0,15,140
chr10	59313668	.	CCTCCCTTCCTCCTTCCTTCCT	C	4535.12	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=6.887;DP=368;FS=4.120;HRun=0;HaplotypeScore=189.6422;InbreedingCoeff=0.3634;MQ=42.47;MQ0=20;MQRankSum=-4.576;QD=24.25;ReadPosRankSum=3.586;VQSLOD=3.2636;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:8:15.05:0,15,503	0/0:5,0:3:3.01:0,3,110	0/0:6,0:2:5.69:0,6,54	0/0:3,0:1:2.84:0,3,14	0/0:11,0:10:10.85:0,11,278	1/1:20,3:23:50.23:1083,50,0	1/1:17,0:16:22.29:264,22,0	0/0:16,0:13:34.36:0,34,745	0/1:10,0:9:86.23:86,0,267	0/0:9,0:8:11.64:0,12,154	0/1:5,0:4:3.26:3,0,33	1/1:18,1:19:26.40:673,26,0	1/1:20,1:20:30.97:877,31,0	0/0:13,0:13:0.52:0,1,119	0/0:12,0:12:9.40:0,9,71	0/0:19,0:18:21.02:0,21,193	0/0:8,0:8:18.06:0,18,581	0/1:4,0:4:35.55:36,0,136	0/0:18,0:16:16.11:0,16,315	0/0:10,0:10:3.86:0,4,182	0/0:32,0:27:1.03:0,1,706	1/1:16,0:16:28.06:347,28,0	1/1:19,3:22:43.98:780,44,0	0/1:31,0:31:55.58:374,0,56	0/1:5,0:4:1.82:2,0,93	0/1:8,0:8:2.30:2,0,109	0/1:6,0:4:8.50:9,0,28	0/0:8,0:7:14.72:0,15,122
chr10	59313675	.	TCCTCCTTCCTTC	T	6415.55	PASS	AB=0.926;AC=39;AF=0.750;AN=52;BaseQRankSum=5.669;DP=369;FS=8.096;HRun=0;HaplotypeScore=141.7013;InbreedingCoeff=0.3754;MQ=43.29;MQ0=23;MQRankSum=-1.043;QD=20.11;ReadPosRankSum=1.817;VQSLOD=3.5107;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:7:14.95:0,15,128	0/0:5,0:3:3:0,3,25	./.	./.	0/0:13,0:12:8.67:0,9,61	1/1:22,0:22:35.65:479,36,0	1/1:16,0:16:9.92:114,10,0	0/0:16,0:12:32.91:0,33,271	0/1:8,0:7:45.82:122,0,46	1/1:3,8:10:29.46:478,29,0	1/1:1,5:5:11.89:177,12,0	1/1:15,0:15:23.82:398,24,0	1/1:22,0:21:16.55:418,17,0	1/1:13,0:13:29.89:477,30,0	1/1:1,9:10:6.01:124,6,0	1/1:6,13:18:20.76:300,21,0	0/1:8,0:8:32.87:33,0,78	0/1:4,0:4:16.38:81,0,16	1/1:5,14:17:47.98:757,48,0	1/1:3,7:10:17.97:278,18,0	0/1:14,20:28:99:222,0,325	1/1:15,0:15:9.28:149,9,0	1/1:22,0:22:14.62:506,15,0	0/1:34,0:34:52.22:167,0,52	1/1:8,0:7:20.94:334,21,0	1/1:0,9:9:20.89:421,21,0	1/1:6,0:4:11.83:206,12,0	1/1:7,0:6:11.98:174,12,0
chr10	59313677	.	CTCCTTCCTTCCT	C	4611.27	PASS	AB=1.000;AC=41;AF=0.820;AN=50;BaseQRankSum=2.334;DP=371;FS=0.000;HRun=0;HaplotypeScore=149.3407;InbreedingCoeff=0.0343;MQ=43.50;MQ0=22;MQRankSum=-2.056;QD=13.85;ReadPosRankSum=2.409;VQSLOD=3.7493;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:7:2.97:0,3,20	./.	./.	./.	1/1:3,0:11:2.21:7,2,0	1/1:14,8:22:21.02:467,21,0	1/1:18,0:17:2.47:35,2,0	0/0:17,0:13:0.89:0,1,2	1/1:8,0:8:12.04:240,12,0	0/1:12,0:11:54.32:245,0,54	1/1:6,0:5:4.11:100,4,0	1/1:5,10:15:17.20:422,17,0	1/1:11,11:21:17.39:438,17,0	1/1:13,0:13:12.04:262,12,0	1/1:10,0:10:3.01:78,3,0	1/1:18,0:18:5.76:150,6,0	1/1:8,0:8:3.85:11,4,0	1/1:4,0:4:6.02:130,6,0	0/1:19,0:17:0.09:356,0,0	0/1:9,0:9:8.01:142,0,8	0/1:34,0:28:93.32:93,0,307	1/1:10,5:15:5.95:104,6,0	1/1:14,8:22:21.52:553,22,0	1/1:18,14:33:3.81:104,4,0	1/1:9,0:8:14.70:196,15,0	0/1:9,0:9:8.95:248,0,9	1/1:7,0:5:11.95:156,12,0	1/1:7,0:6:3.01:74,3,0
chr10	59313679	.	CCTT	C	1091.16	PASS	AB=0.967;AC=25;AF=0.481;AN=52;BaseQRankSum=7.922;DP=373;FS=1.294;HRun=0;HaplotypeScore=117.0061;InbreedingCoeff=-0.5821;MQ=43.45;MQ0=24;MQRankSum=-1.951;QD=3.27;ReadPosRankSum=-0.133;VQSLOD=1.8300;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:14,0:10:11:11,0,165	0/0:6,0:4:5.99:0,6,49	./.	./.	0/0:12,0:11:5.85:0,6,74	1/1:21,0:21:25.44:158,25,0	0/1:16,1:17:14.38:39,0,14	0/0:17,0:13:30.09:0,30,372	0/1:6,2:7:55.65:100,0,56	0/1:12,0:11:27.89:28,0,139	0/1:6,0:5:10.97:11,0,11	1/1:15,0:15:8.67:85,9,0	0/1:22,0:21:5.53:136,0,6	0/1:11,2:13:69.45:69,0,102	0/1:10,0:10:13.06:13,0,25	0/1:18,0:18:17.50:17,0,72	0/1:8,0:8:3.70:4,0,131	0/1:3,1:4:28.16:77,0,28	0/1:22,0:18:44.14:44,0,205	0/1:9,0:9:18.04:18,0,67	0/1:34,0:28:7.70:8,0,293	0/1:12,0:12:30.02:30,0,44	0/1:22,0:22:32.12:167,0,32	0/1:31,0:31:26.10:26,0,152	0/1:10,0:9:51.56:52,0,53	0/1:9,0:9:46.58:62,0,47	0/1:7,1:6:30.08:40,0,30	0/1:8,0:7:45.35:45,0,81
chr10	59313696	.	CT	C	304.36	PASS	AB=0.789;AC=5;AF=0.093;AN=54;BaseQRankSum=4.672;DP=390;FS=10.666;HRun=2;HaplotypeScore=101.8414;InbreedingCoeff=0.2075;MQ=45.30;MQ0=19;MQRankSum=-3.552;QD=8.70;ReadPosRankSum=3.327;VQSLOD=0.3853;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:8,6:10:68.72:123,0,69	0/0:4,0:2:3.01:0,3,44	./.	0/0:4,0:2:5.05:0,5,47	0/1:10,0:10:31.46:98,0,31	0/0:22,0:22:24.23:0,24,290	0/0:16,0:15:18.06:0,18,238	0/0:17,0:13:36.10:0,36,497	0/1:3,3:6:68.41:91,0,68	0/0:13,0:12:31.62:0,32,399	0/0:10,0:10:26.82:0,27,338	0/0:16,0:16:9.34:0,9,134	0/0:20,0:19:8.32:0,8,166	0/0:14,0:14:33.04:0,33,401	0/0:9,0:9:5.99:0,6,63	0/0:21,0:21:30.04:0,30,368	0/0:11,0:11:21.12:0,21,253	1/1:0,5:5:9.03:109,9,0	0/0:19,0:15:40.48:0,40,479	0/0:11,0:11:29.96:0,30,369	0/0:32,0:27:26.91:0,27,293	0/0:12,0:12:12.33:0,12,115	0/0:22,0:22:36.84:0,37,397	0/0:31,0:31:18.86:0,19,239	0/0:13,0:12:36.08:0,36,473	0/0:11,0:11:29.85:0,30,351	0/0:15,0:13:39.10:0,39,509	0/0:10,0:9:17.97:0,18,182
chr10	59315322	.	CG	C	9302.77	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=12.659;DP=597;FS=0.998;HRun=1;HaplotypeScore=59.6862;InbreedingCoeff=0.9990;MQ=81.48;MQ0=0;MQRankSum=-0.931;QD=37.36;ReadPosRankSum=4.891;VQSLOD=5.1227;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,99,1553	0/0:9,0:8:21.07:0,21,333	0/0:14,0:14:37.56:0,38,499	0/0:21,0:21:63.18:0,63,951	0/0:33,0:32:87.27:0,87,1360	0/0:22,0:22:63.18:0,63,955	0/0:17,0:17:51.07:0,51,693	0/0:34,0:34:99:0,99,1493	0/0:16,0:16:45.15:0,45,708	1/1:0,29:29:84.23:1135,84,0	1/1:0,12:11:29.99:373,30,0	0/0:23,0:23:57.16:0,57,880	0/0:20,0:20:57.19:0,57,890	1/1:0,19:19:51.17:712,51,0	1/1:0,15:15:42.14:587,42,0	1/1:0,24:23:54.18:755,54,0	0/0:23,0:23:69.19:0,69,1073	0/0:26,0:26:78.21:0,78,1216	1/1:0,15:15:45.15:629,45,0	1/1:0,27:27:75.25:1046,75,0	1/1:0,19:19:55.07:757,55,0	0/0:11,0:11:33.09:0,33,489	0/0:20,0:20:57.16:0,57,877	0/0:24,0:24:72.22:0,72,1111	1/1:0,31:29:75.25:1046,75,0	1/1:0,24:24:72.24:1006,72,0	1/1:0,25:24:66.22:922,66,0	1/1:0,9:9:24.08:335,24,0
chr10	59315497	.	TACACAC	T	410.88	PASS	AC=8;AF=0.154;AN=52;BaseQRankSum=-0.324;DP=409;FS=0.000;HRun=0;HaplotypeScore=82.4981;InbreedingCoeff=0.5522;MQ=43.48;MQ0=34;MQRankSum=-2.607;QD=5.95;ReadPosRankSum=1.447;VQSLOD=1.5882;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:22,12:31:9.03:184,9,0	0/0:3,0:3:6.02:0,6,72	0/0:40,0:17:6.47:0,6,62	0/0:49,0:16:9.03:0,9,164	0/0:4,8:11:0:0,0,0	0/0:11,0:10:15.05:0,15,381	0/0:16,0:15:11.87:0,12,180	0/0:23,0:19:18.05:0,18,218	1/1:4,9:13:9.03:187,9,0	0/0:6,0:6:12.04:0,12,183	./.	0/0:13,0:10:5.05:0,5,128	0/0:14,0:14:6.91:0,7,153	0/0:12,0:12:15.03:0,15,378	1/1:11,0:11:1.55:4,2,0	0/0:16,0:13:24.75:0,25,550	0/0:18,0:18:6.02:0,6,67	1/1:7,4:11:11.06:159,11,0	0/0:8,0:6:9.03:0,9,191	0/0:3,0:3:3.01:0,3,38	0/0:20,0:14:9.03:0,9,233	0/0:8,0:7:6.02:0,6,155	./.	0/0:24,0:22:17.80:0,18,405	0/0:10,0:9:5.94:0,6,110	0/0:11,0:8:13.29:0,13,249	0/0:9,0:6:1.82:0,2,5	0/0:5,0:5:2.98:0,3,21
chr10	59315545	.	AAAGG	A	621.83	PASS	AB=0.982;AC=8;AF=0.148;AN=54;BaseQRankSum=2.194;DP=491;FS=3.225;HRun=0;HaplotypeScore=77.4380;InbreedingCoeff=0.5342;MQ=54.15;MQ0=63;MQRankSum=0.831;QD=9.28;ReadPosRankSum=-1.104;VQSLOD=2.1624;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:33:71.78:0,72,1828	1/1:1,0:1:3.01:62,3,0	0/0:46,0:17:21.07:0,21,996	0/0:55,1:22:41.59:0,42,1224	0/0:18,0:18:50.58:0,51,1184	0/0:16,0:15:27.05:0,27,593	0/1:26,1:25:7.91:8,0,413	1/1:0,9:9:27.03:444,27,0	0/0:16,0:16:36.11:0,36,931	0/0:22,0:11:20.90:0,21,517	0/0:4,0:2:6.02:0,6,149	0/0:19,0:12:22.32:0,22,472	0/0:11,0:11:23.44:0,23,523	0/0:14,0:12:16.30:0,16,431	0/0:18,0:12:17.01:0,17,330	0/1:20,0:18:9.49:9,0,699	1/1:7,3:9:14.70:235,15,0	0/0:14,0:13:33.04:0,33,788	0/0:21,0:18:49.02:0,49,1007	0/0:4,0:2:3.01:0,3,76	0/0:24,2:19:18.05:0,18,382	0/0:4,0:4:9.03:0,9,212	0/0:5,0:4:3.01:0,3,76	0/0:17,0:14:15.05:0,15,371	0/0:17,0:14:9.50:0,10,251	0/0:17,0:13:30.93:0,31,746	0/0:19,0:16:12.04:0,12,243	./.
chr10	59315547	.	AGG	A	395.13	PASS	AB=0.929;AC=7;AF=0.130;AN=54;BaseQRankSum=3.397;DP=488;FS=3.847;HRun=2;HaplotypeScore=69.8496;InbreedingCoeff=0.6308;MQ=54.41;MQ0=62;MQRankSum=0.462;QD=8.59;ReadPosRankSum=-1.490;VQSLOD=0.0969;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:34:65.63:0,66,1272	1/1:0,1:1:3.01:37,3,0	0/0:48,0:19:44.08:0,44,857	0/0:56,0:22:54.26:0,54,918	0/0:18,0:18:45.15:0,45,875	0/0:16,0:15:24.90:0,25,429	0/1:24,2:24:10.72:11,0,288	1/1:9,0:9:27.03:316,27,0	0/0:16,0:16:36.11:0,36,695	0/0:21,0:11:20.92:0,21,387	0/0:5,0:3:9.03:0,9,168	0/0:19,0:13:25.33:0,25,427	0/0:10,0:10:21.07:0,21,371	0/0:14,0:12:16.09:0,16,308	0/0:17,1:12:17.42:0,17,293	0/0:17,1:16:31.66:0,32,556	1/1:9,1:9:14.60:164,15,0	0/0:14,0:13:30.10:0,30,597	0/0:20,1:18:42.01:0,42,817	0/0:4,0:2:2.86:0,3,61	0/0:23,0:16:17.72:0,18,266	0/0:5,0:5:12.04:0,12,227	0/0:5,0:4:3.01:0,3,61	0/0:16,0:13:12.93:0,13,246	0/0:16,0:13:9.02:0,9,183	0/0:19,0:15:38.08:0,38,690	0/0:19,0:16:11.96:0,12,212	./.
chr10	59316842	.	TA	T	1422.84	PASS	AB=0.829;AC=19;AF=0.339;AN=56;BaseQRankSum=2.397;DP=486;FS=19.707;HRun=13;HaplotypeScore=57.3657;InbreedingCoeff=0.4792;MQ=75.79;MQ0=0;MQRankSum=0.569;QD=6.78;ReadPosRankSum=2.489;VQSLOD=0.6999;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:24:48.36:0,48,442	0/0:2,0:6:14.37:0,14,86	0/1:20,2:19:5.58:6,0,229	0/1:8,1:10:14.65:15,0,86	0/0:18,3:23:12.76:0,13,384	1/1:3,14:17:35.76:263,36,0	1/1:3,12:15:29.77:219,30,0	0/0:12,0:30:54.52:0,55,305	0/1:7,2:9:19.81:20,0,141	0/1:16,3:19:4.93:5,0,264	0/0:14,0:14:32.92:0,33,299	1/1:8,20:28:35.75:263,36,0	1/1:1,12:13:9.29:195,9,0	0/0:15,1:16:17.13:0,17,318	0/0:22,0:23:53.87:0,54,490	0/0:17,1:18:32.15:0,32,463	0/0:4,0:15:28.57:0,29,157	0/0:21,0:25:38.81:0,39,458	0/0:16,0:15:38.99:0,39,359	0/0:11,1:14:7.81:0,8,211	0/1:12,2:14:19.78:20,0,151	0/1:8,8:18:35.50:92,0,36	1/1:2,13:17:39.84:274,40,0	1/1:5,13:18:32.79:241,33,0	0/0:14,0:15:32.89:0,33,306	0/0:15,0:17:35.73:0,36,319	0/0:20,0:20:48.03:0,48,453	0/1:8,1:9:0.88:1,0,154
chr10	59317193	.	G	GCC	2957.98	PASS	AB=0.520;AC=5;AF=0.089;AN=56;BaseQRankSum=-9.349;DP=541;FS=0.000;HRun=2;HaplotypeScore=62.0750;InbreedingCoeff=0.8102;MQ=80.82;MQ0=0;MQRankSum=-2.308;QD=45.51;ReadPosRankSum=-2.178;VQSLOD=2.8597;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,99,1437	0/1:1,12:13:8.06:582,0,8	0/0:13,0:13:35.99:0,36,500	0/0:21,0:20:20.77:0,21,732	0/0:18,0:18:54.18:0,54,795	0/0:17,0:17:48.16:0,48,707	0/0:21,0:21:60.20:0,60,883	1/1:3,22:26:69.17:1195,69,0	0/0:16,0:16:48.15:0,48,688	0/0:27,0:27:78.26:0,78,1149	0/0:16,0:16:45.14:0,45,644	0/0:23,0:23:66.22:0,66,972	0/0:16,0:16:48.16:0,48,706	0/0:17,0:17:51.17:0,51,750	0/0:22,0:22:60.20:0,60,881	0/0:20,0:20:60.20:0,60,883	1/1:3,23:26:72.20:1310,72,0	0/0:13,0:13:39.13:0,39,573	0/0:25,0:25:75.19:0,75,1045	0/0:15,0:15:45.15:0,45,663	0/0:34,0:34:99:0,102,1501	0/0:6,0:6:18.06:0,18,265	0/0:13,0:13:39.13:0,39,574	0/0:21,0:21:60.20:0,60,883	0/0:17,0:17:51.16:0,51,733	0/0:20,0:20:57.19:0,57,839	0/0:18,0:18:51.17:0,51,751	0/0:13,0:13:39.13:0,39,574
chr10	59317252	.	TTCTCTCTCTC	T	700.65	PASS	AB=0.995;AC=19;AF=0.365;AN=52;BaseQRankSum=-0.016;DP=410;FS=1.231;HRun=0;HaplotypeScore=115.7318;InbreedingCoeff=0.0248;MQ=70.02;MQ0=12;MQRankSum=1.625;QD=3.16;ReadPosRankSum=-1.552;VQSLOD=2.2190;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:11.97:0,12,160	0/0:7,0:7:3:0,3,25	./.	./.	0/0:14,0:14:6:0,6,74	0/1:15,0:13:47.28:51,0,47	0/1:19,0:17:7.29:19,0,7	0/0:23,0:23:1.55:0,2,4	0/1:13,0:12:39.18:39,0,41	0/0:16,0:16:3.48:0,3,31	0/0:13,0:12:8.96:0,9,68	0/1:10,0:10:5.28:5,0,5	1/1:12,0:10:6.01:73,6,0	1/1:9,1:9:6.90:112,7,0	0/1:15,0:14:23.20:71,0,23	1/1:9,2:11:5.76:144,6,0	0/0:13,0:13:9.45:0,9,182	0/0:6,0:6:2.99:0,3,24	0/1:18,0:18:0.48:0,0,39	1/1:12,0:12:3.01:35,3,0	0/0:20,0:20:8.98:0,9,82	0/0:8,0:8:2.60:0,3,10	0/0:11,1:12:0.89:0,1,2	0/1:16,1:17:14.94:105,0,15	0/1:24,0:24:54.57:55,0,104	0/1:12,0:11:0.48:39,0,0	0/1:15,0:15:2.01:21,0,2	0/1:19,0:16:7.99:72,0,8
chr10	59317315	.	TCTCC	T	4666.54	PASS	AB=0.583;AC=37;AF=0.661;AN=56;BaseQRankSum=0.715;DP=343;FS=18.027;HRun=0;HaplotypeScore=67.4447;InbreedingCoeff=0.7465;MQ=61.23;MQ0=32;MQRankSum=-0.634;QD=19.28;ReadPosRankSum=-0.107;VQSLOD=2.9273;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:19:36.12:0,36,831	0/0:2,0:2:3.01:0,3,53	0/0:8,0:2:1.81:0,2,11	0/0:25,0:13:6.10:0,6,59	0/0:8,0:7:15.03:0,15,314	1/1:19,1:19:38.85:566,39,0	1/1:3,9:11:5.92:39,6,0	0/0:19,0:19:23.91:0,24,220	0/0:8,0:6:15.04:0,15,289	1/1:0,6:6:15.04:228,15,0	1/1:2,9:9:12.73:143,13,0	1/1:14,0:13:23.55:355,24,0	1/1:11,2:11:32.08:473,32,0	1/1:7,3:9:20.88:246,21,0	1/1:12,2:12:27.02:449,27,0	1/1:14,2:13:32.87:374,33,0	0/0:2,0:2:3.48:0,3,60	0/0:4,0:4:8.94:0,9,113	1/1:4,13:17:35.94:392,36,0	1/1:2,8:10:11.55:140,12,0	1/1:20,0:18:6.01:76,6,0	1/1:3,6:7:9.03:141,9,0	0/1:2,5:6:0:0,0,0	1/1:10,14:21:5.53:71,6,0	1/1:9,1:10:21.07:359,21,0	1/1:9,2:9:21.06:328,21,0	1/1:1,8:9:3.01:50,3,0	1/1:9,0:6:6.13:237,6,0
chr10	59317422	.	CT	C	5992.57	PASS	AB=1.000;AC=45;AF=0.804;AN=56;BaseQRankSum=7.914;DP=415;FS=10.543;HRun=11;HaplotypeScore=74.6728;InbreedingCoeff=0.7913;MQ=69.48;MQ0=0;MQRankSum=-2.209;QD=17.07;ReadPosRankSum=1.768;VQSLOD=5.4056;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,2:21:29.34:0,29,488	1/1:0,0:6:10.19:29,10,0	0/0:7,1:8:0.36:0,0,108	0/1:8,0:8:10.87:11,0,70	0/0:15,0:15:36.08:0,36,378	1/1:4,18:22:49.97:400,50,0	1/1:2,10:12:23.97:197,24,0	1/1:3,0:17:28.51:82,29,0	0/0:8,0:8:18.03:0,18,183	1/1:2,12:14:32.89:264,33,0	1/1:0,10:10:29.84:237,30,0	1/1:3,10:13:26.96:222,27,0	1/1:1,15:16:38.95:320,39,0	1/1:4,6:10:17.94:148,18,0	1/1:2,19:20:50.94:419,51,0	1/1:3,14:17:38.95:320,39,0	1/1:1,0:18:3.61:62,4,0	0/0:12,0:12:30.08:0,30,320	1/1:2,13:16:37.99:301,38,0	1/1:3,18:21:44.90:369,45,0	1/1:1,16:17:38.96:320,39,0	1/1:3,16:19:38.93:320,39,0	1/1:0,7:8:23.01:178,23,0	1/1:2,14:16:35.90:290,36,0	1/1:1,13:14:35.95:296,36,0	1/1:2,14:16:41.95:345,42,0	1/1:3,28:31:77.90:641,78,0	1/1:0,9:9:26.97:222,27,0
chr10	59318819	.	AAAAC	A	19057.41	PASS	AB=1.000;AC=53;AF=0.946;AN=56;BaseQRankSum=2.382;DP=753;FS=10.074;HRun=0;HaplotypeScore=134.5327;InbreedingCoeff=0.6387;MQ=58.32;MQ0=3;MQRankSum=2.827;QD=26.21;ReadPosRankSum=4.707;VQSLOD=4.0179;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,43:51:73.84:1439,74,0	1/1:1,4:5:15.05:243,15,0	0/1:27,0:19:24.10:24,0,372	0/0:26,0:22:27.08:0,27,563	1/1:7,22:29:51.60:799,52,0	1/1:5,15:22:45.14:688,45,0	1/1:13,16:29:36.12:584,36,0	1/1:12,20:32:60.21:900,60,0	1/1:10,15:25:33.11:535,33,0	1/1:10,20:30:57.18:888,57,0	1/1:6,11:17:27.09:438,27,0	1/1:6,22:30:51.16:785,51,0	1/1:10,17:27:45.15:729,45,0	1/1:7,19:25:33:535,33,0	1/1:13,21:33:48.06:778,48,0	1/1:12,31:43:69.03:1118,69,0	1/1:9,27:36:61.39:1245,61,0	1/1:10,13:23:33.11:535,33,0	1/1:5,12:18:38.98:460,39,0	1/1:9,12:21:36.09:556,36,0	1/1:12,24:36:54.18:875,54,0	1/1:9,13:22:24.08:389,24,0	1/1:8,17:25:42.14:679,42,0	1/1:7,26:33:60.20:973,60,0	1/1:4,14:18:39.13:632,39,0	1/1:5,27:32:81.28:1305,81,0	1/1:6,14:19:26.56:437,27,0	1/1:5,11:16:30.10:486,30,0
chr10	59319061	.	A	AAATTAAAG	34451.64	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-4.264;DP=652;FS=12.041;HRun=0;HaplotypeScore=157.7719;InbreedingCoeff=0.9776;MQ=58.28;MQ0=0;MQRankSum=-16.633;QD=78.84;ReadPosRankSum=-0.074;VQSLOD=4.7507;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,129,3273	0/0:4,0:4:12.04:0,12,323	0/0:13,0:10:21.05:0,21,476	0/0:11,0:12:14.63:0,15,317	0/0:16,0:16:42.14:0,42,1081	1/1:5,13:25:45.15:1861,45,0	1/1:14,15:34:72.25:2981,72,0	0/0:39,0:39:93.32:0,93,2437	0/0:21,0:21:51.17:0,51,1311	1/1:7,9:20:45.10:1668,45,0	1/1:5,7:17:24.08:962,24,0	1/1:9,12:25:48.16:2009,48,0	1/1:10,10:26:36.12:1411,36,0	1/1:12,9:24:48.16:1951,48,0	1/1:6,16:23:54.18:2222,54,0	1/1:5,15:23:54.15:2188,54,0	0/0:35,0:35:90.28:0,90,2274	0/0:26,0:26:69.21:0,69,1713	1/1:12,6:23:63.09:1928,63,0	1/1:11,8:21:44.80:1460,45,0	1/1:4,4:11:12.04:487,12,0	1/1:9,13:29:48.16:1854,48,0	1/1:10,23:33:96.32:3554,96,0	1/1:10,17:28:33.29:1153,33,0	1/1:4,15:21:57.20:2243,57,0	1/1:4,19:25:63.21:2461,63,0	1/1:9,8:18:42.14:1672,42,0	1/1:1,3:10:9.03:385,9,0
chr10	59319262	.	AGGGAGGGAGGGAGG	A	978.39	PASS	AB=0.694;AC=10;AF=0.185;AN=54;BaseQRankSum=1.243;DP=272;FS=0.000;HRun=0;HaplotypeScore=77.9717;InbreedingCoeff=0.5547;MQ=54.37;MQ0=17;MQRankSum=0.145;QD=10.87;ReadPosRankSum=0.731;VQSLOD=0.8213;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:8:19.84:0,20,422	0/0:4,0:4:12.04:0,12,288	0/0:14,0:8:9.37:0,9,135	0/1:9,0:7:31.83:32,0,216	0/0:9,0:8:18.05:0,18,573	1/1:13,0:11:25.31:632,25,0	1/1:2,15:15:3.01:112,3,0	0/0:10,0:7:20.90:0,21,436	0/0:4,0:4:12.02:0,12,235	0/0:12,0:10:27.08:0,27,412	0/0:10,0:9:7.91:0,8,188	0/0:11,0:11:3.11:0,3,9	1/1:4,16:18:9.03:272,9,0	0/0:9,0:9:20.61:0,21,573	0/0:10,0:10:30.03:0,30,654	0/0:4,0:4:8.99:0,9,113	0/0:4,0:4:9.03:0,9,263	0/0:4,0:4:9.03:0,9,367	0/0:8,0:5:15.04:0,15,232	0/0:4,3:7:9.03:0,9,199	0/0:16,0:14:39.10:0,39,825	1/1:0,16:16:0.86:67,1,0	./.	0/1:2,11:13:0:0,0,0	0/0:11,0:11:27.02:0,27,488	0/0:2,0:2:6.02:0,6,152	0/0:8,0:7:5.98:0,6,180	0/0:4,0:4:12.04:0,12,281
chr10	59319274	.	AGG	A	1225.99	PASS	AB=0.987;AC=34;AF=0.654;AN=52;BaseQRankSum=-1.584;DP=283;FS=3.661;HRun=3;HaplotypeScore=45.6070;InbreedingCoeff=0.2546;MQ=47.84;MQ0=25;MQRankSum=2.883;QD=5.47;ReadPosRankSum=3.321;VQSLOD=-0.1825;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:11.95:0,12,82	0/0:5,0:5:1.88:0,2,12	./.	0/0:4,0:2:2.94:0,3,20	0/1:8,0:7:0.47:0,0,53	1/1:12,1:11:24.41:200,24,0	1/1:17,1:16:1.27:39,1,0	0/0:19,0:13:11.74:0,12,82	0/0:4,0:4:7.57:0,8,89	1/1:16,0:13:16.85:137,17,0	1/1:7,0:5:5.08:42,5,0	1/1:1,11:12:2.14:32,2,0	0/1:21,2:20:41.06:41,0,53	0/1:10,0:10:18.22:87,0,18	0/1:13,0:12:36.62:153,0,37	./.	1/1:5,0:5:4.26:13,4,0	0/1:7,0:7:25.69:26,0,32	1/1:8,0:4:6.01:56,6,0	1/1:9,0:9:8.18:54,8,0	1/1:18,0:15:33.77:278,34,0	1/1:16,0:16:2.77:16,3,0	0/0:14,0:14:0.88:0,1,2	0/1:15,0:15:0.09:0,0,0	1/1:6,0:6:14.80:110,15,0	1/1:3,0:2:2.98:42,3,0	1/1:2,9:10:2.94:18,3,0	1/1:6,0:5:5.16:31,5,0
chr10	59319276	.	GGA	G	161.73	PASS	AB=0.955;AC=18;AF=0.450;AN=40;BaseQRankSum=2.787;DP=286;FS=1.398;HRun=0;HaplotypeScore=53.5029;InbreedingCoeff=0.1593;MQ=47.51;MQ0=24;MQRankSum=-0.929;QD=1.39;ReadPosRankSum=2.896;VQSLOD=0.9687;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:6:0,6,67	1/1:3,2:5:2.98:21,3,0	./.	./.	0/0:8,0:7:2.04:0,2,6	0/1:12,0:11:5:5,0,24	1/1:17,0:16:2.99:24,3,0	0/0:20,0:14:0:0,0,0	0/0:5,0:5:9.02:0,9,110	0/0:16,0:13:0:0,0,0	1/1:6,1:5:3.01:33,3,0	1/1:12,0:12:2.90:16,3,0	0/0:24,0:21:2.22:0,2,71	0/0:9,0:9:3.01:0,3,42	0/1:12,1:12:0.24:0,0,75	./.	1/1:2,3:5:6.02:66,6,0	1/1:4,3:7:6.02:66,6,0	./.	0/1:9,0:9:0:0,0,0	0/1:18,0:15:9.23:9,0,19	./.	./.	0/0:16,0:16:2.68:0,3,11	./.	0/1:2,0:4:10.24:10,0,12	./.	0/1:2,1:3:12.93:27,0,13
chr10	59319431	.	CCAGA	C	3596.29	PASS	AB=0.981;AC=14;AF=0.250;AN=56;BaseQRankSum=3.922;DP=488;FS=16.799;HRun=0;HaplotypeScore=105.7556;InbreedingCoeff=0.7372;MQ=56.08;MQ0=5;MQRankSum=0.912;QD=21.15;ReadPosRankSum=-1.919;VQSLOD=1.6241;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:17.77:0,18,119	0/0:9,0:9:27.05:0,27,522	0/0:6,0:1:2.96:0,3,19	0/0:9,0:6:1.18:0,1,64	0/0:11,0:11:15.38:0,15,117	1/1:1,19:20:20.16:398,20,0	1/1:1,21:21:6.02:113,6,0	0/0:29,0:27:78.71:0,79,643	0/0:6,0:6:8.20:0,8,103	0/0:12,0:12:36.08:0,36,836	0/0:12,0:12:21.45:0,21,377	1/1:0,19:19:27.09:508,27,0	0/1:25,1:26:99:273,0,514	0/1:14,0:14:2.08:2,0,115	0/0:22,0:22:66.04:0,66,1241	0/0:12,0:12:24.12:0,24,224	0/0:22,0:22:63:0,63,999	0/0:20,0:20:16.05:0,16,161	0/0:19,0:17:28.97:0,29,279	0/0:17,0:17:40.29:0,40,346	0/0:17,0:16:41.82:0,42,333	1/1:1,28:29:60.82:750,61,0	1/1:11,6:17:47.93:639,48,0	1/1:13,10:23:68.92:911,69,0	0/0:21,0:21:62.78:0,63,732	0/0:17,0:17:30.32:0,30,408	0/0:32,0:30:45.74:0,46,481	0/0:10,0:10:29.43:0,29,251
chr10	59319432	.	CAGAAAGAAAGAAAGAAAGAAAGAA	C	1495.13	PASS	AB=0.625;AC=7;AF=0.130;AN=54;BaseQRankSum=0.787;DP=494;FS=4.211;HRun=0;HaplotypeScore=284.2418;InbreedingCoeff=0.6965;MQ=55.77;MQ0=5;MQRankSum=-3.954;QD=29.32;ReadPosRankSum=-0.742;VQSLOD=2.1817;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:6,9:15:51.77:163,0,52	0/0:9,0:9:21.07:0,21,1469	./.	0/0:9,0:6:0.89:0,1,2	1/1:3,7:10:18.06:761,18,0	0/0:20,0:20:24.08:0,24,1674	0/0:22,0:21:6.02:0,6,233	0/0:27,0:25:27.09:0,27,670	1/1:5,1:6:12.04:516,12,0	0/0:12,0:12:30.10:0,30,2208	0/0:12,0:12:33.11:0,33,2083	0/0:19,0:19:27.09:0,27,1949	0/0:26,0:26:48.16:0,48,2976	0/0:14,0:14:27.09:0,27,1049	0/0:22,0:22:60.21:0,60,4011	0/0:12,0:12:27.09:0,27,1620	0/0:22,0:22:36.11:0,36,2782	1/1:8,12:20:3.01:188,3,0	0/0:20,0:18:36.12:0,36,2370	0/0:17,0:17:39.13:0,39,1776	0/0:16,0:15:18.04:0,18,599	0/0:29,0:29:45.15:0,45,2550	0/0:17,0:17:27.09:0,27,1205	0/0:26,0:26:55.42:0,55,2720	0/0:26,0:26:63.18:0,63,3804	0/0:17,0:17:39.13:0,39,2187	0/0:33,0:31:66.22:0,66,3591	0/0:10,0:10:21.07:0,21,1249
chr10	59319482	.	GAAAGATAA	G	5860.97	PASS	AB=0.988;AC=16;AF=0.286;AN=56;BaseQRankSum=-10.121;DP=597;FS=29.781;HRun=0;HaplotypeScore=181.8874;InbreedingCoeff=0.1185;MQ=57.94;MQ0=5;MQRankSum=2.860;QD=20.35;ReadPosRankSum=-3.868;VQSLOD=2.2434;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:43.48:0,43,553	0/1:9,0:9:99:184,0,253	0/0:21,0:13:33.31:0,33,515	0/0:24,0:8:13.83:0,14,187	0/0:17,0:17:47.80:0,48,589	0/0:21,0:21:32.97:0,33,358	0/0:24,0:23:11.54:0,12,171	1/1:28,0:24:45.95:663,46,0	0/0:13,0:13:19.23:0,19,529	0/1:23,0:23:99:541,0,351	0/1:13,0:13:99:148,0,189	0/0:23,0:23:31.87:0,32,318	0/0:27,0:27:47.44:0,47,985	1/1:0,14:14:12.04:341,12,0	0/1:33,0:33:99:606,0,764	0/0:15,0:15:12.98:0,13,49	0/1:23,0:23:99:542,0,494	0/0:22,0:22:16.21:0,16,438	0/1:18,2:17:50.50:444,0,51	0/1:23,0:23:5.15:433,0,5	1/1:18,0:17:34.92:684,35,0	0/0:22,0:21:35.81:0,36,362	0/0:22,0:22:25.44:0,25,211	0/0:22,0:22:41.71:0,42,358	0/1:30,0:30:99:484,0,617	0/1:23,0:23:58.12:733,0,58	0/1:30,1:28:56.93:57,0,87	0/0:11,0:11:3.64:0,4,44
chr10	59319486	.	GATAA	G	11250.34	PASS	AB=1.000;AC=36;AF=0.643;AN=56;BaseQRankSum=-3.957;DP=610;FS=24.997;HRun=0;HaplotypeScore=130.2431;InbreedingCoeff=0.4932;MQ=59.09;MQ0=6;MQRankSum=4.734;QD=25.06;ReadPosRankSum=-0.462;VQSLOD=2.8727;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:37.33:0,37,551	0/1:9,0:9:44.16:184,0,44	0/0:23,0:14:12.57:0,13,508	0/0:26,0:9:6.17:0,6,166	0/0:19,0:19:51.60:0,52,710	0/1:20,0:20:0.42:195,0,0	0/1:23,0:22:30.35:64,0,30	1/1:22,5:23:63.18:921,63,0	0/0:15,0:15:44.38:0,44,652	1/1:28,0:28:8.52:957,9,0	1/1:8,4:12:3.05:511,3,0	1/1:23,0:23:27.98:280,28,0	0/0:30,0:30:9.39:0,9,632	1/1:14,0:14:12.04:160,12,0	0/1:33,0:33:99:901,0,118	1/1:0,15:15:15.05:299,15,0	0/1:24,0:24:87.04:595,0,87	0/0:22,0:22:32.78:0,33,465	1/1:4,16:17:51.17:844,51,0	1/1:1,21:22:60.03:798,60,0	1/1:19,1:19:54.11:847,54,0	1/1:21,0:20:29.31:293,29,0	1/1:23,0:23:23.96:267,24,0	1/1:21,0:21:31.63:362,32,0	0/1:29,0:29:43.37:702,0,43	1/1:2,21:23:54.16:1075,54,0	1/1:1,31:32:39.13:754,39,0	1/1:0,10:10:12.04:239,12,0
chr10	59319490	.	A	AGAAAG	2067.41	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=-3.494;DP=626;FS=22.848;HRun=0;HaplotypeScore=178.0863;InbreedingCoeff=0.3389;MQ=60.59;MQ0=4;MQRankSum=4.206;QD=8.40;ReadPosRankSum=-0.077;VQSLOD=1.1892;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:19.50:0,20,938	0/1:8,0:8:19.21:19,0,21	0/0:29,0:18:30.63:0,31,774	0/0:32,0:11:11.59:0,12,212	0/0:19,0:19:51.17:0,51,1064	0/0:20,0:20:51.63:0,52,792	0/0:23,0:22:9.27:0,9,632	1/1:28,0:27:29.74:347,30,0	0/0:16,0:16:47.98:0,48,936	1/1:27,0:27:13.45:401,13,0	0/1:12,0:12:60.83:61,0,95	0/0:24,0:24:63.21:0,63,999	0/0:29,0:29:77.65:0,78,1217	0/0:14,0:14:11.43:0,11,83	0/1:36,0:36:61.66:254,0,62	0/0:15,0:15:15.02:0,15,142	0/1:24,0:24:51.94:101,0,52	0/0:23,0:23:33.11:0,33,733	0/1:19,0:18:9.85:10,0,172	0/1:22,0:22:95.77:112,0,96	1/1:19,0:18:15.35:313,15,0	0/0:22,0:21:51.16:0,51,800	0/0:23,0:23:63.25:0,63,868	0/0:22,0:22:66.11:0,66,982	1/1:24,4:28:46.37:495,46,0	0/1:23,0:23:94.27:134,0,94	0/0:32,0:29:29.21:0,29,291	0/0:10,0:10:10.83:0,11,90
chr10	59323129	.	C	CT	4263.62	PASS	AB=0.608;AC=22;AF=0.393;AN=56;BaseQRankSum=-6.928;DP=651;FS=2.037;HRun=12;HaplotypeScore=110.1813;InbreedingCoeff=0.8425;MQ=77.36;MQ0=1;MQRankSum=-0.253;QD=16.09;ReadPosRankSum=-2.488;VQSLOD=4.1450;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:55:99:0,135,948	0/0:9,0:9:17.87:0,18,130	0/0:27,0:22:19.35:0,19,164	0/0:15,0:14:7.78:0,8,72	0/0:18,0:18:41.07:0,41,292	0/0:3,0:20:35.57:0,36,116	0/0:2,0:20:32.59:0,33,94	0/0:29,1:30:44.59:0,45,474	0/0:23,0:23:59.63:0,60,434	1/1:6,20:26:35.15:491,35,0	1/1:6,16:24:30.14:341,30,0	0/0:4,0:30:46.20:0,46,143	0/0:7,0:24:32.54:0,33,94	1/1:3,18:21:30.05:292,30,0	1/1:3,21:23:42:403,42,0	1/1:6,14:21:20.46:343,20,0	0/0:30,0:33:75.52:0,76,528	0/0:24,0:26:48.57:0,49,339	0/1:8,17:25:8.69:393,0,9	1/1:4,13:17:20.63:291,21,0	1/1:6,9:16:26.88:248,27,0	0/0:1,0:15:27.03:0,27,81	0/0:4,0:17:23.17:0,23,80	0/0:0,0:23:38.69:0,39,112	0/1:6,10:18:38.65:158,0,39	1/1:6,25:32:65.91:616,66,0	1/1:4,24:30:18.27:514,18,0	1/1:3,7:10:18.03:175,18,0
chr10	59323945	.	CT	C	2093.82	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=5.343;DP=341;FS=9.910;HRun=9;HaplotypeScore=62.5595;InbreedingCoeff=0.9328;MQ=58.69;MQ0=2;MQRankSum=-7.400;QD=19.75;ReadPosRankSum=-1.783;VQSLOD=2.9688;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,16:22:44.98:412,45,0	1/1:0,5:5:15.01:137,15,0	0/0:11,0:4:8.89:0,9,84	0/0:8,0:5:11.93:0,12,103	1/1:4,20:24:72.04:659,72,0	0/0:22,0:22:48.14:0,48,554	0/0:13,0:13:24.05:0,24,258	1/1:6,18:23:54.29:480,54,0	1/1:1,3:4:9:82,9,0	0/0:14,0:14:39.09:0,39,433	0/0:9,0:9:21.05:0,21,232	0/0:8,0:8:15.04:0,15,173	0/0:6,0:6:18.04:0,18,197	0/0:10,0:10:24.05:0,24,266	0/0:11,0:11:27.08:0,27,311	0/0:16,0:16:42.11:0,42,473	1/1:5,10:15:35.55:299,36,0	1/1:5,7:11:24.01:220,24,0	0/0:25,0:23:51.61:0,52,580	0/0:7,0:7:18.05:0,18,208	0/0:7,0:7:18.05:0,18,208	0/0:4,0:4:12.04:0,12,138	0/0:4,0:4:5.76:0,6,69	0/0:5,0:5:15.02:0,15,160	0/0:11,0:11:30.09:0,30,346	0/0:10,0:9:24.02:0,24,261	0/0:15,0:15:36.11:0,36,415	0/0:19,0:19:51.14:0,51,580
chr10	59332676	.	TC	T	6341.70	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=12.988;DP=773;FS=0.652;HRun=3;HaplotypeScore=80.5279;InbreedingCoeff=0.9998;MQ=88.43;MQ0=0;MQRankSum=-2.534;QD=33.91;ReadPosRankSum=2.590;VQSLOD=5.4329;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,99,1406	0/0:15,0:15:42.10:0,42,550	0/0:21,0:21:57.18:0,57,781	0/0:37,0:37:96:0,96,1351	0/0:16,0:16:45.14:0,45,629	1/1:1,11:12:30.09:372,30,0	1/1:0,32:32:87.26:1078,87,0	0/0:26,0:26:75.23:0,75,1047	0/0:28,0:28:81.26:0,81,1148	0/0:22,0:22:60.15:0,60,825	0/0:13,0:13:36.11:0,36,496	1/1:0,32:32:93.29:1153,93,0	1/1:0,22:22:63.20:781,63,0	0/0:32,0:32:96.31:0,96,1360	0/0:33,0:33:96.32:0,96,1382	0/0:41,0:41:99:0,123,1735	0/0:41,0:41:99:0,117,1644	0/0:26,0:26:78.26:0,78,1111	0/0:31,0:31:90.30:0,90,1295	0/0:18,0:18:54.17:0,54,759	0/0:71,0:70:99:0,202,2776	1/1:0,25:25:63.20:781,63,0	1/1:0,21:21:51.13:616,51,0	1/1:0,43:43:99:1562,126,0	0/0:22,0:22:63.19:0,63,884	0/0:28,0:28:84.28:0,84,1208	0/0:16,0:16:48.16:0,48,691	0/0:14,0:14:36.12:0,36,514
chr10	59336718	.	GC	G	917.70	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.060;DP=763;FS=3.637;HRun=2;HaplotypeScore=73.5245;InbreedingCoeff=0.9986;MQ=87.86;MQ0=0;MQRankSum=-2.034;QD=31.64;ReadPosRankSum=1.200;VQSLOD=3.4516;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,144,2110	0/0:10,0:10:27.09:0,27,403	0/0:24,0:24:72.17:0,72,975	0/0:30,0:30:75.16:0,75,1069	0/0:16,0:16:45.13:0,45,647	0/0:23,0:23:69.23:0,69,1034	0/0:29,0:29:84.26:0,84,1220	0/0:29,0:29:81.27:0,81,1190	0/0:23,0:23:69.22:0,69,1013	0/0:35,0:35:99:0,102,1529	0/0:11,0:11:33.10:0,33,475	0/0:44,0:44:99:0,132,1949	0/0:16,0:16:48.16:0,48,720	0/0:26,0:26:78.26:0,78,1169	1/1:1,28:29:78.25:1013,78,0	0/0:30,0:30:90.30:0,90,1349	0/0:37,0:37:99:0,108,1569	0/0:40,0:40:99:0,117,1730	0/0:24,0:24:72.21:0,72,1021	0/0:21,0:21:60.19:0,60,867	0/0:71,0:71:99:0,208,3054	0/0:21,0:21:54.18:0,54,809	0/0:16,0:16:48.16:0,48,718	0/0:35,0:35:99:0,105,1562	0/0:25,0:25:75.22:0,75,1084	0/0:21,0:21:60.18:0,60,861	0/0:13,0:13:39.13:0,39,579	0/0:14,0:14:42.14:0,42,629
chr10	59338026	.	AGCCTGGGCCACAGTT	A	5908.65	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=11.026;DP=636;FS=2.630;HRun=0;HaplotypeScore=251.4192;InbreedingCoeff=0.9963;MQ=86.57;MQ0=0;MQRankSum=-10.531;QD=80.94;ReadPosRankSum=2.319;VQSLOD=4.6848;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,29:29:51.17:2059,51,0	0/0:14,0:14:42.04:0,42,2746	0/0:26,0:24:65.93:0,66,2992	0/0:24,0:24:65.39:0,65,3381	1/1:1,9:10:21.07:737,21,0	0/0:19,0:19:57.19:0,57,3759	0/0:40,0:40:99:0,120,7691	0/0:32,0:32:96.28:0,96,5265	1/1:0,23:23:51.18:2311,51,0	0/0:19,0:19:57.17:0,57,3654	0/0:12,0:12:30.03:0,30,1813	0/0:26,0:26:72.25:0,72,5048	0/0:21,0:21:60.18:0,60,4127	0/0:33,0:33:99:0,99,6846	0/0:28,0:28:84.29:0,84,6036	0/0:17,0:17:51.16:0,51,3601	0/0:42,0:42:99:0,123,8201	1/1:0,11:11:18.06:801,18,0	0/0:15,0:15:45.15:0,45,2998	0/0:21,0:21:57.20:0,57,4006	0/0:45,0:45:99:0,132,8070	0/0:24,0:24:66.20:0,66,4131	0/0:16,0:16:45.15:0,45,2923	0/0:24,0:24:72.20:0,72,4512	0/0:14,0:14:42.14:0,42,3015	0/0:22,0:22:66.23:0,66,4710	0/0:19,0:18:57.18:0,57,3905	0/0:10,0:10:30.10:0,30,2120
chr10	59344709	.	C	CT	117.76	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-2.846;DP=559;FS=1.004;HRun=11;HaplotypeScore=55.2186;InbreedingCoeff=0.5676;MQ=63.28;MQ0=3;MQRankSum=-0.399;QD=11.78;ReadPosRankSum=-1.626;VQSLOD=2.6955;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:80.55:0,81,624	0/0:11,0:11:26.87:0,27,209	0/0:7,0:7:8.95:0,9,69	0/0:6,0:4:2.96:0,3,20	0/0:27,0:28:57.81:0,58,430	0/0:27,0:27:62.67:0,63,483	0/0:10,0:10:20:0,20,158	0/0:40,2:42:13.75:0,14,472	1/1:2,7:10:17.20:207,17,0	0/0:24,0:24:47.70:0,48,364	0/0:22,1:23:23.35:0,23,364	0/0:17,0:17:44.71:0,45,340	0/0:18,0:18:44.80:0,45,348	0/0:13,0:13:29.87:0,30,232	0/0:21,0:22:61.81:0,62,470	0/0:16,2:18:38.82:0,39,300	0/0:22,0:22:26.25:0,26,387	0/0:24,1:25:58.76:0,59,442	0/0:20,0:20:5.37:0,5,225	0/0:20,0:21:31.82:0,32,238	0/0:10,0:10:14.91:0,15,116	0/0:18,0:18:35.33:0,35,278	0/0:20,0:20:1.41:0,1,152	0/0:19,0:20:31.82:0,32,377	0/0:22,1:23:7.49:0,7,246	0/0:24,0:24:37.79:0,38,283	0/0:25,0:24:59.73:0,60,464	0/0:17,0:17:38.80:0,39,302
chr10	59344985	.	TTTCC	T	870.64	PASS	AB=0.984;AC=14;AF=0.280;AN=50;BaseQRankSum=4.496;DP=673;FS=4.359;HRun=0;HaplotypeScore=110.6986;InbreedingCoeff=0.6160;MQ=71.39;MQ0=4;MQRankSum=0.287;QD=4.19;ReadPosRankSum=0.507;VQSLOD=2.0524;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:20,16:37:15.05:228,15,0	1/1:8,0:11:2.96:27,3,0	./.	./.	1/1:24,11:36:31.89:429,32,0	0/0:13,0:19:6.02:0,6,102	0/0:29,0:29:24.08:0,24,398	./.	1/1:13,0:21:12.01:112,12,0	0/0:27,0:26:17.85:0,18,348	0/0:18,0:18:21.06:0,21,444	0/0:18,0:25:15.04:0,15,221	0/0:14,0:15:3.01:0,3,53	0/0:26,0:26:33.11:0,33,737	0/1:29,1:30:18.44:18,0,467	0/0:31,0:31:33.07:0,33,663	1/1:22,0:28:2.84:27,3,0	1/1:10,8:18:12.04:182,12,0	0/0:16,0:15:3.01:0,3,55	0/0:17,0:17:9.03:0,9,207	0/0:50,0:50:57.17:0,57,1145	0/0:12,0:19:14.08:0,14,230	0/0:19,0:19:15.04:0,15,234	0/0:19,0:32:21:0,21,303	0/0:21,0:21:15.04:0,15,290	0/1:27,0:27:11.72:12,0,509	0/0:17,0:17:21.05:0,21,384	0/0:19,0:19:18.53:0,19,417
chr10	59345402	.	C	CGT	11612.11	PASS	AB=0.915;AC=46;AF=0.821;AN=56;BaseQRankSum=-4.375;DP=616;FS=3.183;HRun=0;HaplotypeScore=113.2195;InbreedingCoeff=0.3439;MQ=54.64;MQ0=17;MQRankSum=-3.229;QD=19.85;ReadPosRankSum=3.077;VQSLOD=5.0879;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:15,0:27:0.17:159,0,0	1/1:12,1:13:5.94:94,6,0	0/0:15,0:12:24.03:0,24,292	0/0:16,0:14:35.90:0,36,425	0/1:7,0:17:1.93:74,0,2	1/1:16,0:15:21.06:254,21,0	1/1:26,0:25:42.12:470,42,0	1/1:5,13:16:35.94:375,36,0	0/1:12,0:19:14.38:138,0,14	1/1:6,22:27:75.10:1111,75,0	1/1:12,9:21:33.10:522,33,0	1/1:26,0:25:29.82:372,30,0	1/1:14,0:14:23.99:261,24,0	1/1:5,22:27:51.17:868,51,0	1/1:2,21:23:24.08:411,24,0	1/1:8,8:16:35.77:591,36,0	0/1:7,21:26:3.22:280,0,3	0/1:17,0:24:7.43:242,0,7	0/1:20,2:21:20.97:388,0,21	1/1:12,8:18:33.11:578,33,0	1/1:12,35:43:54.10:820,54,0	1/1:14,0:14:21.24:230,21,0	1/1:8,0:8:12.03:132,12,0	1/1:40,0:42:67.07:774,67,0	1/1:3,16:19:17.14:317,17,0	1/1:7,25:29:74.70:1159,75,0	1/1:3,14:17:30.57:515,31,0	1/1:1,13:14:27.09:477,27,0
chr10	59345404	.	T	TGC	9994.65	PASS	AB=1.000;AC=49;AF=0.875;AN=56;BaseQRankSum=0.964;DP=621;FS=3.435;HRun=0;HaplotypeScore=122.3846;InbreedingCoeff=0.4132;MQ=54.30;MQ0=17;MQRankSum=-1.877;QD=16.85;ReadPosRankSum=7.638;VQSLOD=4.2221;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:16,13:31:45.83:482,46,0	1/1:1,0:13:5.92:58,6,0	0/0:13,0:10:30.10:0,30,447	0/0:15,0:14:35.61:0,36,489	1/1:10,5:16:20.68:237,21,0	1/1:2,15:16:21.07:404,21,0	1/1:1,22:23:42.14:802,42,0	0/1:19,0:17:14.72:99,0,15	1/1:13,8:18:35.37:403,35,0	1/1:28,0:27:43.34:502,43,0	1/1:21,0:21:30.22:250,30,0	1/1:3,25:26:35.90:649,36,0	1/1:0,14:14:24.08:429,24,0	1/1:27,0:27:50.77:471,51,0	1/1:23,0:23:1.92:194,2,0	1/1:16,0:16:35.12:311,35,0	0/1:28,0:26:9.22:168,0,9	1/1:12,15:24:44.79:585,45,0	0/1:20,0:19:99:135,0,107	1/1:20,0:18:16.45:287,16,0	1/1:46,0:42:46.38:387,46,0	1/1:0,13:13:21.26:403,21,0	1/1:2,10:12:11.77:231,12,0	1/1:4,38:44:69.21:1286,69,0	1/1:20,0:20:2.17:150,2,0	1/1:33,0:29:52.51:530,53,0	1/1:17,0:17:30.48:291,30,0	1/1:14,0:14:10.05:250,10,0
chr10	59345414	.	TGC	T	983.04	PASS	AB=0.873;AC=14;AF=0.250;AN=56;BaseQRankSum=-2.270;DP=606;FS=19.846;HRun=0;HaplotypeScore=152.1030;InbreedingCoeff=-0.3567;MQ=50.94;MQ0=18;MQRankSum=-0.729;QD=2.80;ReadPosRankSum=-1.200;VQSLOD=1.4709;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:37,3:39:51.55:52,0,215	0/0:14,0:14:8.31:0,8,80	0/0:6,0:4:5.95:0,6,42	0/0:6,0:3:3:0,3,31	0/0:16,2:18:12.71:0,13,98	0/0:19,0:18:20.36:0,20,371	0/0:27,0:26:59.79:0,60,627	0/0:16,0:14:21.93:0,22,239	0/1:20,3:21:54.01:54,0,164	0/1:19,5:23:99:171,0,247	0/1:17,5:22:55.67:56,0,183	0/0:24,0:23:26.70:0,27,456	0/0:12,0:12:26.84:0,27,319	0/1:22,4:26:99:109,0,437	0/1:20,1:21:12.62:13,0,232	0/1:12,5:17:41.55:42,0,240	0/0:23,0:21:10.98:0,11,370	0/0:23,1:21:18.87:0,19,256	0/1:14,5:18:87.59:181,0,88	0/1:15,7:20:48.70:49,0,236	0/1:45,5:45:99:210,0,261	0/0:11,0:11:20.32:0,20,251	0/0:14,0:14:20.96:0,21,320	0/0:41,0:41:80.86:0,81,1096	0/1:20,1:21:41.13:41,0,248	0/1:29,5:30:99:130,0,439	0/1:15,1:16:13.67:14,0,168	0/1:15,1:15:16.51:17,0,218
chr10	59352002	.	T	TCA	26695.96	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-1.459;DP=1270;FS=0.811;HRun=0;HaplotypeScore=227.1278;InbreedingCoeff=0.9926;MQ=60.64;MQ0=16;MQRankSum=5.053;QD=22.99;ReadPosRankSum=6.358;VQSLOD=5.0179;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:22,29:51:99:1728,111,0	1/1:15,0:15:27.04:277,27,0	0/0:40,0:16:15.93:0,16,186	0/0:68,0:28:47.86:0,48,431	1/1:1,23:24:50.84:836,51,0	1/1:25,0:25:57.14:607,57,0	1/1:50,0:50:87.19:900,87,0	1/1:41,0:38:75.03:696,75,0	1/1:21,31:53:99:2100,136,0	1/1:52,0:49:99:1130,115,0	1/1:29,1:29:57.09:594,57,0	1/1:63,0:63:99:1494,144,0	1/1:68,0:68:99:1348,129,0	1/1:53,0:53:99:1169,111,0	1/1:72,0:72:99:1494,150,0	1/1:58,0:58:99:1191,116,0	1/1:47,0:47:99:1098,106,0	1/1:10,11:21:48.12:715,48,0	1/1:23,0:20:38.75:387,39,0	1/1:35,0:35:87.21:910,87,0	1/1:117,0:115:99:2338,220,0	1/1:38,0:38:78.12:791,78,0	1/1:40,0:40:78.19:820,78,0	1/1:51,0:51:99:1092,108,0	1/1:43,0:43:74.39:778,74,0	1/1:42,0:41:99:1114,111,0	1/1:31,0:31:66.12:714,66,0	1/1:17,0:16:36.09:376,36,0
chr10	59352009	.	C	CAA	43847.45	PASS	AB=1.000;AC=51;AF=0.911;AN=56;BaseQRankSum=-9.353;DP=1287;FS=5.431;HRun=1;HaplotypeScore=173.1929;InbreedingCoeff=0.7742;MQ=61.68;MQ0=16;MQRankSum=8.393;QD=37.32;ReadPosRankSum=9.654;VQSLOD=4.4157;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:48,0:48:18.52:747,19,0	1/1:0,15:15:27.08:521,27,0	0/0:44,0:21:49.88:0,50,482	0/0:68,0:30:70.50:0,71,789	1/1:23,0:23:50.58:420,51,0	1/1:8,16:24:66.18:1173,66,0	1/1:1,48:51:87.30:1679,87,0	1/1:36,8:41:99:1795,103,0	1/1:56,0:55:17.02:893,17,0	1/1:0,49:49:99:2378,144,0	1/1:2,28:29:63.71:1142,64,0	1/1:0,61:62:99:2802,149,0	1/1:2,63:67:99:2478,129,0	1/1:1,51:52:99:2140,111,0	1/1:1,75:76:99:2894,153,0	1/1:1,61:63:99:2253,116,0	1/1:18,27:46:99:2138,107,0	0/1:22,0:22:31.20:329,0,31	1/1:2,21:20:57.04:859,57,0	1/1:2,36:38:99:1781,102,0	1/1:8,116:123:99:4305,228,0	1/1:1,36:37:87.79:1555,88,0	1/1:2,39:41:67.29:1491,67,0	1/1:26,29:55:99:2378,148,0	1/1:0,39:39:75.26:1447,75,0	1/1:12,29:40:99:2178,120,0	1/1:10,17:28:84.16:1378,84,0	1/1:1,16:16:36.12:694,36,0
chr10	59352099	.	AAC	A	30539.13	PASS	AB=0.599;AC=50;AF=0.893;AN=56;BaseQRankSum=-7.866;DP=1238;FS=3.157;HRun=0;HaplotypeScore=189.1543;InbreedingCoeff=0.6603;MQ=63.98;MQ0=19;MQRankSum=2.338;QD=27.61;ReadPosRankSum=6.197;VQSLOD=5.5302;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:18,35:52:99:1501,126,0	1/1:0,13:13:36.12:454,36,0	0/0:58,0:23:45.66:0,46,613	0/0:74,0:37:44.01:0,44,819	0/1:5,14:19:4.84:431,0,5	1/1:5,24:29:51.12:626,51,0	1/1:16,15:30:81.20:971,81,0	0/1:25,39:63:99:1273,0,196	1/1:9,38:47:93.25:1155,93,0	1/1:22,32:54:99:1581,129,0	1/1:9,8:17:39.10:465,39,0	1/1:13,36:49:99:1666,131,0	1/1:26,28:53:99:1514,126,0	1/1:15,31:45:99:1353,114,0	1/1:28,48:75:99:2340,166,0	1/1:22,34:56:99:1677,135,0	1/1:10,40:50:93.30:1174,93,0	1/1:5,30:35:69.22:870,69,0	1/1:18,5:17:33.08:381,33,0	1/1:13,18:31:78.21:963,78,0	1/1:31,77:107:99:3176,262,0	1/1:13,17:30:75.21:907,75,0	1/1:7,14:21:51.16:642,51,0	1/1:12,55:67:99:1476,103,0	1/1:9,12:21:48.15:605,48,0	1/1:5,43:48:99:1557,101,0	1/1:4,40:44:93.30:1174,93,0	1/1:7,13:20:48.15:606,48,0
chr10	59352967	.	TAA	T	6633.52	PASS	AB=0.606;AC=46;AF=0.821;AN=56;BaseQRankSum=-5.114;DP=543;FS=5.545;HRun=13;HaplotypeScore=95.6124;InbreedingCoeff=0.7139;MQ=60.44;MQ0=4;MQRankSum=1.675;QD=14.81;ReadPosRankSum=1.837;VQSLOD=4.0969;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:5,2:42:3.58:0,4,153	1/1:1,8:9:21.03:204,21,0	0/0:21,1:10:17.58:0,18,168	0/0:16,0:8:15.62:0,16,94	0/1:14,2:34:10.36:10,0,183	1/1:1,0:14:30.18:132,30,0	1/1:2,0:16:35.67:155,36,0	1/1:7,20:25:31.27:466,31,0	0/0:4,0:14:30.96:0,31,154	1/1:2,13:15:39.03:373,39,0	1/1:5,13:19:32.91:366,33,0	1/1:3,0:24:43.83:191,44,0	1/1:3,0:19:43.90:191,44,0	1/1:1,11:13:35.79:332,36,0	1/1:1,19:22:56.47:499,56,0	1/1:3,14:17:39.04:378,39,0	1/1:8,11:21:34.19:312,34,0	0/1:6,2:21:19.38:19,0,88	1/1:7,13:20:14.05:357,14,0	1/1:2,14:16:36.01:348,36,0	1/1:5,9:14:20.95:194,21,0	1/1:3,0:15:30.11:131,30,0	1/1:1,0:19:46.58:202,47,0	1/1:0,0:13:30.19:131,30,0	1/1:0,18:18:51.08:495,51,0	1/1:3,15:19:38.85:409,39,0	1/1:3,12:16:29.76:274,30,0	1/1:4,18:22:48.06:466,48,0
chr10	59353988	.	GGTGTGTGTGTGTGTGTGTGTGT	G	2165.16	PASS	AB=0.770;AC=14;AF=0.259;AN=54;BaseQRankSum=3.087;DP=561;FS=12.064;HRun=0;HaplotypeScore=259.2008;InbreedingCoeff=0.6418;MQ=64.87;MQ0=16;MQRankSum=-2.354;QD=13.12;ReadPosRankSum=-0.201;VQSLOD=0.6303;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:33:18.06:0,18,609	0/0:13,0:13:12.04:0,12,406	./.	0/0:22,0:13:3.01:0,3,41	0/0:14,0:14:12.51:0,13,601	1/1:9,8:17:12.04:672,12,0	1/1:24,0:23:14.78:220,15,0	0/0:25,0:24:15.52:0,16,545	0/0:11,0:11:18.06:0,18,775	0/0:21,0:21:24.08:0,24,1125	0/0:10,0:10:9.03:0,9,606	0/1:16,4:20:0.14:168,0,0	1/1:14,4:17:3.48:173,3,0	0/0:14,0:16:15.05:0,15,1009	0/0:24,0:30:18.53:0,19,1065	0/1:14,0:23:99:306,0,114	0/0:20,0:25:16.58:0,17,428	0/0:8,0:14:13.25:0,13,284	0/0:16,0:14:8.72:0,9,439	0/0:9,0:9:12.04:0,12,912	0/0:46,0:43:24.08:0,24,1844	1/1:13,9:22:11.99:538,12,0	1/1:14,0:14:6.48:81,6,0	1/1:14,11:25:2.74:173,3,0	0/0:11,0:9:9.03:0,9,715	0/0:19,0:19:24.07:0,24,1495	0/0:23,0:23:39.13:0,39,2225	0/0:10,0:8:3.01:0,3,267
chr10	59355561	.	A	AT	10526.67	PASS	AB=0.611;AC=43;AF=0.768;AN=56;BaseQRankSum=-11.078;DP=569;FS=12.061;HRun=9;HaplotypeScore=55.9842;InbreedingCoeff=0.9045;MQ=70.81;MQ0=3;MQRankSum=-1.690;QD=23.87;ReadPosRankSum=1.684;VQSLOD=5.0252;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:71.97:0,72,624	1/1:4,12:16:33.09:365,33,0	0/0:21,0:12:23.52:0,24,175	0/0:13,0:9:10.29:0,10,67	0/0:23,0:23:59.96:0,60,517	1/1:2,22:24:63.17:697,63,0	1/1:3,21:24:60.16:664,60,0	1/1:6,24:30:72.15:782,72,0	0/0:19,0:19:38.97:0,39,339	1/1:7,19:26:57.63:631,58,0	1/1:4,18:23:50.97:543,51,0	1/1:4,19:23:39.11:431,39,0	1/1:7,13:20:13.07:372,13,0	1/1:0,14:13:30.08:332,30,0	1/1:3,16:19:42.11:465,42,0	1/1:4,14:19:18.90:420,19,0	1/1:5,24:29:26.06:731,26,0	0/0:23,0:23:62.89:0,63,537	1/1:3,23:26:69.15:742,69,0	1/1:3,13:16:33.05:352,33,0	1/1:2,11:13:24.06:266,24,0	0/1:4,7:11:5:178,0,5	1/1:4,21:25:51.10:551,51,0	1/1:2,19:21:51.14:564,51,0	1/1:2,12:14:27.07:299,27,0	1/1:4,16:20:25.08:505,25,0	1/1:2,17:19:42.11:464,42,0	1/1:2,7:9:17.54:175,18,0
chr10	59360090	.	GCTCTCT	G	1705.29	PASS	AB=0.976;AC=15;AF=0.326;AN=46;BaseQRankSum=-4.991;DP=524;FS=26.051;HRun=0;HaplotypeScore=128.5050;InbreedingCoeff=0.5986;MQ=62.97;MQ0=25;MQRankSum=1.779;QD=13.12;ReadPosRankSum=2.354;VQSLOD=0.8121;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:25:25.97:434,0,26	0/0:11,0:11:3.01:0,3,75	./.	./.	1/1:13,0:12:3.01:60,3,0	1/1:15,0:15:18.06:343,18,0	1/1:9,0:14:3.01:50,3,0	0/0:30,0:25:1.55:0,2,4	1/1:3,0:10:3.01:47,3,0	0/0:22,0:19:24.08:0,24,511	./.	0/1:5,0:5:0:1,0,0	./.	0/0:17,0:16:12.04:0,12,273	0/0:33,0:32:24.54:0,25,495	0/0:24,0:24:26.83:0,27,628	0/0:21,0:19:24.04:0,24,418	1/1:15,1:14:15.05:283,15,0	0/0:21,0:20:18.53:0,19,436	0/0:17,0:17:9.03:0,9,222	0/0:25,0:23:12.04:0,12,273	0/1:9,0:9:0:0,0,0	./.	1/1:20,0:20:36.10:636,36,0	0/0:21,0:21:6.02:0,6,151	0/0:32,0:30:18.06:0,18,378	0/0:16,0:15:9.03:0,9,180	0/0:11,0:9:6.49:0,6,132
chr10	59360096	.	T	TCG	3669.07	PASS	AB=0.972;AC=20;AF=0.357;AN=56;BaseQRankSum=3.394;DP=558;FS=0.000;HRun=0;HaplotypeScore=98.0115;InbreedingCoeff=0.6723;MQ=57.52;MQ0=43;MQRankSum=1.861;QD=13.69;ReadPosRankSum=3.006;VQSLOD=2.9747;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:26:53.58:0,54,472	0/0:12,0:12:18:0,18,172	0/0:20,0:10:24.04:0,24,254	0/0:39,0:21:43.62:0,44,481	0/0:15,0:13:23.98:0,24,208	0/0:15,0:15:36.03:0,36,349	0/0:17,0:16:17.93:0,18,143	0/0:29,0:24:65.87:0,66,586	0/0:11,0:11:8.99:0,9,75	0/1:24,0:21:72.60:295,0,73	1/1:15,0:14:17.92:140,18,0	0/0:5,0:5:5.99:0,6,48	0/0:11,0:9:14.93:0,15,119	1/1:18,0:17:29.93:282,30,0	1/1:34,0:33:48.94:505,49,0	1/1:26,0:25:49.44:485,49,0	0/0:29,0:23:51.04:0,51,461	0/0:16,0:14:35.96:0,36,331	0/1:21,0:20:6.26:381,0,6	1/1:19,0:18:37.85:297,38,0	1/1:26,0:23:29.74:282,30,0	0/0:9,0:9:17.98:0,18,151	0/0:7,0:6:3:0,3,25	0/0:28,0:21:47.87:0,48,448	1/1:18,0:18:38.79:321,39,0	0/1:28,4:30:1.34:423,0,1	0/1:21,0:19:15.53:171,0,16	1/1:14,0:11:5.92:88,6,0
chr10	59360136	.	TCACACACACACACACACACACA	T	755.14	PASS	AB=0.884;AC=7;AF=0.152;AN=46;BaseQRankSum=2.453;DP=467;FS=9.667;HRun=0;HaplotypeScore=169.7928;InbreedingCoeff=0.3323;MQ=38.19;MQ0=58;MQRankSum=-3.385;QD=8.12;ReadPosRankSum=0.659;VQSLOD=2.2508;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:27:17.20:0,17,189	0/0:8,0:8:6.02:0,6,392	./.	./.	0/0:11,0:12:3.48:0,3,36	0/0:15,0:15:12.04:0,12,810	0/0:25,0:23:12.51:0,13,950	0/0:13,0:7:12.04:0,12,311	0/0:14,0:14:0.94:0,1,1	0/1:22,1:18:6.48:165,0,6	./.	0/0:11,0:11:7.84:0,8,379	0/0:20,0:17:30.02:0,30,1797	0/0:11,0:10:0.47:0,0,1	0/0:24,5:27:3.34:0,3,20	0/1:19,3:22:4.15:165,0,4	0/0:28,0:21:24.55:0,25,1174	0/0:17,0:12:26.20:0,26,442	0/1:11,0:12:6.64:329,0,7	1/1:12,2:12:3.48:37,3,0	0/0:33,0:27:5.25:0,5,23	0/0:17,0:16:12.04:0,12,970	./.	0/0:35,0:26:23.60:0,24,1030	0/0:6,3:9:4.77:0,5,24	0/0:15,0:12:0:0,0,0	1/1:16,3:17:2.02:170,2,0	./.
chr10	59362115	.	GCACACA	G	476.09	PASS	AB=0.937;AC=28;AF=0.700;AN=40;BaseQRankSum=1.959;DP=551;FS=2.762;HRun=0;HaplotypeScore=119.5063;InbreedingCoeff=0.2972;MQ=68.40;MQ0=17;MQRankSum=-1.175;QD=1.68;ReadPosRankSum=2.820;VQSLOD=2.2701;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:3.01:0,3,33	./.	./.	./.	0/0:14,0:14:3.01:0,3,32	1/1:9,0:11:3.01:42,3,0	1/1:26,0:25:2.79:41,3,0	./.	1/1:19,0:22:2.79:13,3,0	0/0:21,0:19:0.89:0,1,2	0/1:9,0:9:0:0,0,0	1/1:16,0:18:3.01:42,3,0	1/1:12,0:15:3.01:42,3,0	./.	1/1:17,3:24:6.02:119,6,0	1/1:19,4:22:6:84,6,0	1/1:22,0:28:6.02:84,6,0	1/1:14,0:16:3.77:17,4,0	1/1:20,0:20:0.88:2,1,0	./.	./.	1/1:17,0:17:2.74:12,3,0	1/1:11,0:10:2.88:15,3,0	0/1:26,0:27:0:0,0,0	./.	0/0:25,0:23:0.89:0,1,2	0/0:12,0:12:0.47:0,0,1	1/1:10,2:12:3.01:60,3,0
chr10	59364729	.	G	GAC	316.12	PASS	AB=0.941;AC=9;AF=0.161;AN=56;BaseQRankSum=6.758;DP=766;FS=6.914;HRun=0;HaplotypeScore=130.8170;InbreedingCoeff=-0.0878;MQ=52.53;MQ0=29;MQRankSum=0.155;QD=1.29;ReadPosRankSum=-2.505;VQSLOD=1.4990;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:52:6.02:0,6,84	0/0:15,0:13:39.13:0,39,545	0/0:14,0:2:2.84:0,3,14	0/1:27,0:11:2.91:3,0,152	0/1:23,0:22:0:0,0,0	0/1:25,4:26:99:193,0,250	0/1:33,3:35:99:109,0,575	0/0:34,0:29:81.11:0,81,1046	0/0:27,0:27:21.03:0,21,214	0/0:20,0:20:51.01:0,51,595	0/0:16,0:14:33.09:0,33,437	0/1:28,2:28:3.75:4,0,435	0/1:18,8:25:50.87:51,0,342	0/0:26,0:25:60.20:0,60,836	0/0:41,0:38:99:0,100,1294	0/0:39,0:36:99:0,99,1371	0/0:39,0:34:64.89:0,65,1124	0/1:25,0:24:5.78:6,0,163	0/0:18,0:18:47.82:0,48,544	0/0:28,0:27:23.86:0,24,550	0/0:38,0:37:74.57:0,75,963	0/1:26,1:26:34.12:34,0,486	0/1:22,0:22:38.95:39,0,451	0/0:36,2:36:42.12:0,42,578	0/0:19,0:19:39.12:0,39,524	0/0:33,0:32:84.29:0,84,1123	0/0:13,0:12:36.08:0,36,460	0/0:9,0:9:23.97:0,24,312
chr10	59364733	.	GACAGACAC	G	907.15	PASS	AB=0.949;AC=15;AF=0.278;AN=54;BaseQRankSum=-4.797;DP=781;FS=9.235;HRun=0;HaplotypeScore=185.4886;InbreedingCoeff=0.1577;MQ=52.44;MQ0=31;MQRankSum=0.436;QD=2.56;ReadPosRankSum=-3.146;VQSLOD=1.3774;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:3,52:54:2.90:53,3,0	0/0:15,0:13:35.55:0,36,633	./.	0/0:21,0:12:16.75:0,17,154	1/1:2,22:24:5.58:30,6,0	0/0:29,0:26:44.98:0,45,749	0/0:39,0:38:60.42:0,60,579	0/0:34,0:28:17.11:0,17,303	1/1:2,26:29:20.92:500,21,0	0/1:19,0:19:17.81:18,0,488	0/0:17,0:15:16.06:0,16,503	0/0:31,0:29:39.05:0,39,837	0/0:26,0:25:41.77:0,42,585	0/1:23,0:22:22.26:22,0,860	0/1:38,0:35:56.75:57,0,1494	0/0:41,0:38:31.36:0,31,1975	0/0:40,0:35:55.28:0,55,1503	0/1:4,22:25:1:209,0,1	0/0:20,0:20:14.23:0,14,539	0/1:27,0:26:51.43:51,0,407	0/1:41,0:40:6.36:6,0,902	0/0:24,0:23:19.90:0,20,565	0/0:24,0:24:43.97:0,44,545	0/0:38,0:36:15.03:0,15,401	0/1:19,0:19:35.83:36,0,347	0/1:35,0:35:45.70:46,0,999	0/1:16,0:14:39.81:40,0,358	0/0:10,0:10:30.04:0,30,712
chr10	59364735	.	CAG	C	2793.24	PASS	AB=0.968;AC=25;AF=0.463;AN=54;BaseQRankSum=-1.099;DP=787;FS=16.831;HRun=0;HaplotypeScore=121.0762;InbreedingCoeff=-0.6246;MQ=54.20;MQ0=32;MQRankSum=-1.383;QD=4.26;ReadPosRankSum=-0.912;VQSLOD=1.7573;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:55,0:53:0.36:1,0,0	0/1:15,0:13:26.75:74,0,27	./.	0/0:21,0:11:15.70:0,16,130	0/0:25,0:24:3.01:0,3,32	0/1:30,0:27:99:207,0,206	0/1:42,0:41:99:148,0,281	0/1:32,0:26:22.74:23,0,242	1/1:29,0:29:20.70:134,21,0	0/1:20,0:20:19.90:214,0,20	0/1:16,1:15:75.39:75,0,121	0/0:31,0:29:15.15:0,15,309	0/1:26,0:25:30.14:30,0,170	0/1:25,1:25:99:184,0,143	0/1:32,6:35:99:363,0,232	0/1:37,4:38:99:284,0,346	0/1:39,0:34:99:151,0,150	0/1:25,0:24:32.79:33,0,61	0/1:18,1:19:50.55:99,0,51	0/1:26,0:25:64.82:65,0,141	0/1:41,1:41:99:253,0,202	0/1:24,0:23:61.11:61,0,269	0/1:24,1:25:71.80:72,0,213	0/0:39,0:37:14.99:0,15,270	0/1:20,1:21:34.22:34,0,164	0/1:36,1:36:99:239,0,173	0/1:16,0:14:61.31:144,0,61	0/1:8,2:10:59.18:59,0,134
chr10	59364737	.	GAC	G	1264.46	PASS	AB=0.978;AC=18;AF=0.333;AN=54;BaseQRankSum=1.124;DP=782;FS=1.554;HRun=0;HaplotypeScore=133.1359;InbreedingCoeff=0.0610;MQ=54.25;MQ0=34;MQRankSum=-1.118;QD=2.69;ReadPosRankSum=2.116;VQSLOD=2.7149;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:56,0:54:7.33:18,0,7	1/1:3,10:12:29.92:327,30,0	./.	0/0:20,0:11:21.19:0,21,229	0/0:25,0:24:5.80:0,6,32	0/1:31,0:28:61.89:62,0,165	0/1:43,0:42:20.76:21,0,257	0/1:22,9:25:1.24:202,0,1	1/1:29,0:29:12.57:51,13,0	0/0:19,0:19:7.59:0,8,201	0/0:18,0:16:9.96:0,10,343	0/0:13,0:30:14.45:0,14,159	0/1:26,0:25:0.82:1,0,144	0/0:25,0:25:23.32:0,23,508	0/1:37,0:36:34.45:34,0,711	0/1:39,0:37:19.24:19,0,880	1/1:14,23:34:48.24:602,48,0	0/1:24,1:24:34.31:42,0,34	0/0:19,0:19:15.59:0,16,248	0/0:24,0:24:29.84:0,30,400	0/1:41,0:40:0.78:1,0,654	0/1:22,0:21:16.15:16,0,83	0/1:23,0:24:16.30:16,0,94	0/0:19,0:39:0:0,0,0	0/0:21,0:21:39.09:0,39,500	0/0:35,0:34:50.93:0,51,720	0/0:14,0:13:1.83:0,2,205	0/1:10,0:10:10.94:11,0,321
chr10	59369552	.	T	TCAGAGTGGCAGCCATGGAGTCAC	102736.30	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-5.112;DP=699;FS=3.297;HRun=0;HaplotypeScore=364.0542;InbreedingCoeff=0.9164;MQ=72.71;MQ0=0;MQRankSum=-9.598;QD=156.85;ReadPosRankSum=4.886;VQSLOD=3.9994;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:34,5:46:78.22:4885,78,0	1/1:9,2:11:27.09:1721,27,0	0/0:23,0:23:48.14:0,48,1653	0/0:20,0:21:51.65:0,52,1897	1/1:20,1:23:12:680,12,0	1/1:12,2:17:30.10:1592,30,0	1/1:20,1:25:57.20:4581,57,0	1/1:39,0:39:99:5442,111,0	1/1:18,11:31:78.27:7198,78,0	1/1:24,3:32:81.21:4403,81,0	1/1:17,2:19:18.06:1835,18,0	1/1:28,12:43:99:9490,106,0	1/1:25,6:32:90.31:7006,90,0	1/1:28,9:38:96.33:8585,96,0	1/1:14,7:23:63.22:5658,63,0	1/1:21,7:30:77.96:6642,78,0	1/1:13,6:23:57.19:5434,57,0	1/1:9,2:16:27.09:2376,27,0	1/1:16,1:17:48.16:2497,48,0	1/1:23,3:28:39.13:2925,39,0	1/1:18,1:24:15.01:1312,15,0	1/1:15,1:17:21.03:1287,21,0	1/1:18,1:22:18.06:1561,18,0	1/1:8,6:17:33.07:3078,33,0	1/1:20,4:31:48.08:2898,48,0	1/1:20,0:20:60.21:3574,60,0	1/1:19,6:27:66.70:5424,67,0	1/1:2,1:4:6.02:652,6,0
chr10	59370460	.	CAGAG	C	5778.85	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=12.807;DP=771;FS=0.799;HRun=0;HaplotypeScore=130.6055;InbreedingCoeff=0.9997;MQ=80.52;MQ0=0;MQRankSum=-2.186;QD=44.11;ReadPosRankSum=4.980;VQSLOD=5.3477;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,39:39:93.32:1765,93,0	0/0:11,0:11:30.10:0,30,787	0/0:23,0:23:45.20:0,45,1327	0/0:21,0:21:54.13:0,54,1185	1/1:3,30:33:72.16:1287,72,0	0/0:24,0:24:66.23:0,66,1744	0/0:31,0:31:90.31:0,90,2316	0/0:38,0:38:99:0,108,2783	1/1:1,25:26:69.24:1305,69,0	0/0:31,0:31:84.29:0,84,2210	0/0:12,0:12:30.10:0,30,786	0/0:32,0:32:90.30:0,90,2334	0/0:24,0:24:66.23:0,66,1685	0/0:24,0:24:72.23:0,72,1800	0/0:15,0:15:42.14:0,42,1125	0/0:28,0:28:84.28:0,84,2131	0/0:37,0:37:99:0,108,2846	1/1:3,30:33:75.26:1422,75,0	0/0:27,0:27:81.28:0,81,2102	0/0:21,0:21:51.63:0,52,1241	0/0:57,0:57:99:0,166,4176	0/0:24,0:24:72.25:0,72,1916	0/0:33,0:33:99:0,99,2625	0/0:40,0:40:99:0,120,3239	0/0:17,0:17:51.18:0,51,1366	0/0:27,0:27:81.28:0,81,2102	0/0:27,0:27:75.23:0,75,1776	0/0:16,0:16:48.16:0,48,1295
chr10	59373343	.	TCA	T	468.34	PASS	AB=0.833;AC=19;AF=0.475;AN=40;BaseQRankSum=3.561;DP=319;FS=2.321;HRun=0;HaplotypeScore=43.9517;InbreedingCoeff=0.1745;MQ=61.40;MQ0=8;MQRankSum=0.252;QD=2.39;ReadPosRankSum=0.855;VQSLOD=1.4920;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:17.96:0,18,144	./.	./.	./.	0/0:3,0:3:2.98:0,3,22	0/0:5,0:5:5.68:0,6,53	0/1:33,0:39:32.44:32,0,55	./.	0/0:6,0:6:2.99:0,3,23	1/1:10,3:13:5.93:49,6,0	./.	0/1:8,2:9:20.26:20,0,115	0/0:5,0:5:9:0,9,109	0/1:10,3:13:52.61:53,0,55	1/1:2,1:3:2.68:32,3,0	1/1:1,1:2:3.01:32,3,0	1/1:20,0:20:12.18:52,12,0	0/0:12,0:21:24.02:0,24,254	1/1:11,1:11:3.01:32,3,0	./.	1/1:39,3:41:0.23:160,0,0	./.	0/0:5,0:5:5.95:0,6,58	0/1:16,4:20:31.52:32,0,337	0/1:7,2:9:19.10:26,0,19	1/1:7,5:13:11.78:86,12,0	0/0:4,0:4:6.02:0,6,89	./.
chr10	59374391	.	CG	C	2557.99	PASS	AC=40;AF=0.952;AN=42;BaseQRankSum=-1.732;DP=93;FS=0.000;HRun=2;HaplotypeScore=31.6629;InbreedingCoeff=0.1499;MQ=56.32;MQ0=0;MQRankSum=-1.732;QD=28.11;ReadPosRankSum=0.317;VQSLOD=3.0158;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,5:5:11.99:136,12,0	1/1:0,1:1:3.01:39,3,0	./.	0/0:1,0:1:2.98:0,3,22	./.	./.	1/1:0,12:12:36.12:466,36,0	1/1:1,1:2:3.01:39,3,0	1/1:0,2:2:6.02:78,6,0	1/1:0,5:5:15.05:195,15,0	1/1:0,3:3:9.03:117,9,0	1/1:0,1:1:3.01:39,3,0	./.	1/1:0,2:2:6.02:77,6,0	1/1:0,1:1:3.01:39,3,0	1/1:0,1:1:3.01:39,3,0	1/1:1,3:4:8.98:117,9,0	1/1:1,2:3:6.02:78,6,0	1/1:0,3:3:9.03:117,9,0	./.	1/1:0,20:20:32.86:426,33,0	1/1:0,3:3:6.02:78,6,0	1/1:0,4:4:6.02:78,6,0	1/1:1,14:15:27.56:351,28,0	1/1:0,1:1:3.01:39,3,0	1/1:1,2:3:9:100,9,0	./.	./.
chr10	59376207	.	GCACACACACA	G	2467.42	PASS	AC=14;AF=0.259;AN=54;BaseQRankSum=6.093;DP=656;FS=0.681;HRun=0;HaplotypeScore=180.4789;InbreedingCoeff=0.8079;MQ=60.87;MQ0=14;MQRankSum=-8.312;QD=13.19;ReadPosRankSum=0.778;VQSLOD=2.8094;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:33:33.09:0,33,1164	0/0:9,0:9:3.48:0,3,132	0/0:22,0:15:3.01:0,3,84	./.	0/0:6,0:8:3.01:0,3,131	1/1:14,12:24:24.55:691,25,0	1/1:23,8:31:19.80:461,20,0	0/0:31,0:31:47.89:0,48,1256	0/0:16,0:23:24.08:0,24,913	0/0:17,0:16:18.06:0,18,843	0/0:8,0:8:15.05:0,15,516	1/1:13,12:25:17.65:390,18,0	1/1:9,12:22:2.56:585,3,0	0/0:29,0:32:39.12:0,39,1408	0/0:22,0:24:45.06:0,45,1676	0/0:22,0:23:45.15:0,45,2079	0/0:19,0:22:39.10:0,39,1427	0/0:16,0:35:40.65:0,41,1605	0/0:12,0:13:16.85:0,17,473	0/0:10,0:10:18.06:0,18,600	0/0:53,0:57:66.67:0,67,2398	1/1:12,10:24:14.76:265,15,0	1/1:7,6:14:5.93:158,6,0	1/1:32,11:44:3.48:90,3,0	0/0:19,0:20:21.06:0,21,654	0/0:20,0:19:39.13:0,39,1337	0/0:17,0:19:27.09:0,27,1077	0/0:14,0:18:38.81:0,39,1347
chr10	59380037	.	AGTGT	A	1519.49	PASS	AC=36;AF=0.692;AN=52;BaseQRankSum=4.045;DP=556;FS=0.000;HRun=0;HaplotypeScore=102.3736;InbreedingCoeff=0.5887;MQ=63.28;MQ0=13;MQRankSum=-1.704;QD=4.66;ReadPosRankSum=2.879;VQSLOD=1.8344;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:28.86:0,29,549	0/0:6,0:10:2.70:0,3,52	./.	0/0:31,0:21:0:0,0,0	0/0:19,1:20:30.10:0,30,640	1/1:16,8:24:9.01:102,9,0	1/1:21,6:28:8.12:264,8,0	0/0:25,0:23:10.84:0,11,125	1/1:9,0:18:12.01:110,12,0	1/1:19,0:22:3:28,3,0	1/1:9,0:10:3:28,3,0	1/1:17,4:20:3.01:46,3,0	1/1:13,3:16:9.02:139,9,0	1/1:10,0:12:6.01:56,6,0	1/1:14,0:17:3:28,3,0	1/1:12,0:12:3:28,3,0	0/0:22,0:29:18.04:0,18,283	1/1:8,7:15:15.05:231,15,0	./.	1/1:18,0:23:9.89:84,10,0	0/0:29,0:27:0.29:0,0,0	0/0:11,0:13:5.74:0,6,37	1/1:17,3:21:5.56:92,6,0	1/1:17,8:25:12.04:185,12,0	1/1:8,0:17:8.38:63,8,0	1/1:13,0:15:5.29:55,5,0	1/1:13,0:17:9.01:84,9,0	1/1:4,0:8:6.01:56,6,0
chr10	59383826	.	GCT	G	237.24	PASS	AB=0.951;AC=11;AF=0.204;AN=54;BaseQRankSum=-1.450;DP=712;FS=5.573;HRun=0;HaplotypeScore=108.9014;InbreedingCoeff=0.2142;MQ=65.88;MQ0=11;MQRankSum=1.545;QD=1.14;ReadPosRankSum=-0.220;VQSLOD=1.1254;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:61,0:61:23.40:0,23,185	0/1:12,0:12:14.43:14,0,30	./.	0/0:38,0:17:0:0,0,0	0/0:23,0:23:7.57:0,8,89	1/1:28,0:28:4.90:29,5,0	0/1:24,2:26:5.96:33,0,6	0/0:31,0:29:6.02:0,6,67	0/0:14,0:16:17.73:0,18,199	0/0:32,0:32:22.83:0,23,279	0/0:14,0:14:4.34:0,4,45	0/0:22,0:22:20.51:0,21,243	0/0:22,0:22:18.77:0,19,143	0/0:17,0:17:1.44:0,1,4	0/1:23,0:22:7.37:7,0,39	0/0:29,0:30:8.22:0,8,55	0/1:19,7:26:15.19:77,0,15	1/1:11,3:17:22.92:179,23,0	0/0:27,0:27:0.89:0,1,2	0/1:24,0:23:0.16:0,0,21	0/0:31,0:28:10.05:0,10,83	0/0:15,0:16:2.24:0,2,7	0/0:16,0:16:3.01:0,3,32	0/1:29,1:33:29.73:30,0,455	0/1:18,0:18:0.40:0,0,2	0/0:32,0:32:23.87:0,24,227	0/0:25,0:23:11.19:0,11,98	0/0:17,0:17:17.99:0,18,190
chr10	59385141	.	T	TCA	164.31	PASS	AB=0.967;AC=10;AF=0.217;AN=46;BaseQRankSum=-0.358;DP=502;FS=1.425;HRun=0;HaplotypeScore=73.1261;InbreedingCoeff=0.2240;MQ=67.03;MQ0=8;MQRankSum=-0.472;QD=1.29;ReadPosRankSum=-0.324;VQSLOD=1.2810;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:11.08:0,11,90	1/1:3,0:3:2.12:41,2,0	./.	./.	0/0:21,0:21:9:0,9,87	0/0:22,0:21:17.79:0,18,158	0/0:27,0:27:20.68:0,21,206	1/1:15,0:15:2.98:21,3,0	0/0:14,0:17:11.86:0,12,110	0/1:16,0:15:8.76:9,0,39	./.	0/1:19,0:20:26.11:26,0,124	0/0:19,0:18:5.30:0,5,63	0/0:10,0:10:6.01:0,6,64	0/1:18,0:18:26.52:27,0,98	0/1:17,3:20:25.92:38,0,26	1/1:19,6:34:9.50:132,10,0	0/0:24,0:24:23.56:0,24,234	./.	./.	0/0:38,0:37:13.07:0,13,123	0/0:22,0:22:15.04:0,15,159	0/0:4,0:4:9.02:0,9,96	0/0:33,0:35:44.78:0,45,443	0/0:7,0:7:2.84:0,3,14	0/0:13,0:11:5.80:0,6,45	0/0:17,0:17:9.02:0,9,96	0/0:2,0:2:6.02:0,6,64
chr10	59385494	.	G	GTAA	297.68	PASS	AB=0.649;AC=1;AF=0.024;AN=42;BaseQRankSum=-3.270;DP=254;FS=9.339;HRun=0;HaplotypeScore=40.5796;InbreedingCoeff=-0.0263;MQ=83.74;MQ0=0;MQRankSum=-1.338;QD=12.40;ReadPosRankSum=0.520;VQSLOD=1.1268;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:14.99:0,15,162	./.	./.	./.	0/0:9,0:11:2.98:0,3,21	0/0:8,0:11:17.96:0,18,180	0/0:6,0:6:3.01:0,3,39	0/0:28,0:28:0.47:0,0,1	./.	0/0:4,0:5:5.99:0,6,60	./.	0/0:5,0:6:2.98:0,3,21	0/0:5,0:6:5.99:0,6,60	0/0:8,0:8:9.03:0,9,117	0/0:6,0:6:3.01:0,3,39	0/0:3,0:3:3.01:0,3,39	0/0:23,0:25:13.87:0,14,77	0/0:10,0:14:8.93:0,9,63	0/0:8,0:8:6.02:0,6,78	0/0:5,0:5:6.02:0,6,78	0/0:4,0:4:2.97:0,3,20	./.	0/0:1,0:2:2.98:0,3,21	0/0:6,0:6:6.02:0,6,77	0/0:5,0:10:11.85:0,12,80	./.	0/0:9,0:9:9.03:0,9,117	0/1:11,13:24:87.10:369,0,87
chr10	59390687	.	AAG	A	13103.40	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=10.604;DP=800;FS=12.097;HRun=0;HaplotypeScore=103.0424;InbreedingCoeff=0.9997;MQ=77.01;MQ0=0;MQRankSum=-3.372;QD=38.88;ReadPosRankSum=3.771;VQSLOD=6.5125;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,141,2565	0/0:10,0:10:27.09:0,27,497	0/0:20,0:20:46.92:0,47,721	0/0:15,0:15:42.12:0,42,698	0/0:32,0:32:90.29:0,90,1612	0/0:26,0:26:75.24:0,75,1362	0/0:28,0:28:84.27:0,84,1536	0/0:25,0:25:72.23:0,72,1238	0/0:30,0:30:87.30:0,87,1613	1/1:0,32:32:96.32:1413,96,0	1/1:0,21:21:54.14:771,54,0	0/0:29,0:29:84.29:0,84,1556	0/0:37,0:37:99:0,108,1956	1/1:0,27:27:75.25:1103,75,0	1/1:1,40:41:99:1458,99,0	1/1:0,33:33:87.29:1281,87,0	0/0:38,0:38:99:0,114,2094	0/0:24,0:24:72.25:0,72,1347	1/1:0,18:18:54.18:794,54,0	1/1:1,26:27:72.17:1012,72,0	1/1:1,45:46:99:1723,117,0	0/0:29,0:29:87.25:0,87,1493	0/0:31,0:31:93.32:0,93,1702	0/0:40,0:40:99:0,117,2131	1/1:1,22:23:54.18:795,54,0	1/1:0,28:28:78.24:1126,78,0	1/1:0,30:30:84.28:1230,84,0	1/1:0,11:11:27.09:398,27,0
chr10	59393160	.	C	CACCA	38229.60	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-11.959;DP=753;FS=2.806;HRun=0;HaplotypeScore=119.0162;InbreedingCoeff=0.9997;MQ=62.67;MQ0=1;MQRankSum=-5.402;QD=60.97;ReadPosRankSum=6.086;VQSLOD=6.6925;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,43:52:99:2944,120,0	0/0:11,0:10:30.10:0,30,552	0/0:29,0:27:72.68:0,73,1279	0/0:22,0:20:47.58:0,48,808	1/1:4,26:29:75.21:1871,75,0	1/1:3,19:22:60.21:1559,60,0	1/1:5,27:33:84.29:2215,84,0	0/0:29,0:29:78.25:0,78,1347	1/1:1,23:24:63.22:1662,63,0	1/1:5,30:34:96.33:2376,96,0	1/1:1,15:17:42.14:1106,42,0	1/1:3,22:27:63.22:1651,63,0	1/1:0,16:19:51.18:1328,51,0	1/1:0,24:24:66.23:1739,66,0	1/1:2,26:30:72.25:1898,72,0	1/1:2,25:28:63.22:1662,63,0	0/0:35,0:35:96.33:0,96,1709	1/1:3,14:16:33.11:862,33,0	1/1:3,10:12:33.10:816,33,0	1/1:4,18:24:57.05:1282,57,0	1/1:12,36:48:78.27:2056,78,0	1/1:2,22:26:57.20:1505,57,0	1/1:7,15:22:36.12:947,36,0	1/1:7,29:36:77.97:2028,78,0	1/1:1,16:17:39.13:1022,39,0	1/1:6,30:36:96.22:2379,96,0	1/1:0,28:28:81.28:2136,81,0	1/1:1,16:17:45.15:1186,45,0
chr10	59393551	.	CCACACA	C	1708.70	PASS	AB=0.944;AC=28;AF=0.560;AN=50;BaseQRankSum=4.476;DP=463;FS=0.000;HRun=0;HaplotypeScore=111.4832;InbreedingCoeff=0.3739;MQ=64.57;MQ0=24;MQRankSum=-4.970;QD=7.00;ReadPosRankSum=1.442;VQSLOD=1.7874;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:26:5.85:56,6,0	0/0:6,0:5:3.01:0,3,74	./.	./.	1/1:8,0:11:3.01:42,3,0	0/0:12,0:12:12.04:0,12,272	0/0:14,0:13:15.03:0,15,349	0/0:21,0:21:1.55:0,2,4	1/1:14,0:17:11.40:133,11,0	1/1:7,2:10:9.49:128,9,0	1/1:9,3:11:9.03:167,9,0	0/1:18,0:18:16.85:17,0,527	0/0:8,0:8:9.03:0,9,191	1/1:13,0:13:3.89:62,4,0	1/1:11,5:16:24.04:389,24,0	1/1:13,4:19:18.06:324,18,0	0/0:10,0:12:15.05:0,15,353	1/1:9,0:11:6.49:84,6,0	./.	1/1:11,1:12:3.01:60,3,0	0/0:19,0:16:1.84:0,2,23	0/1:14,0:14:48.14:48,0,228	0/0:14,0:16:7.71:0,8,211	0/0:15,0:19:12.04:0,12,327	1/1:11,1:12:3.90:62,4,0	1/1:11,0:11:2.99:25,3,0	0/1:15,5:20:35.75:150,0,36	0/1:18,0:17:55.68:129,0,56
chr10	59394021	.	T	TC	1759.84	PASS	AB=0.828;AC=9;AF=0.161;AN=56;BaseQRankSum=14.254;DP=1178;FS=128.352;HRun=0;HaplotypeScore=490.0875;InbreedingCoeff=-0.2032;MQ=48.67;MQ0=23;MQRankSum=-12.037;QD=4.68;ReadPosRankSum=3.080;VQSLOD=0.4515;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:62.29:0,62,810	0/1:14,3:21:96.77:97,0,379	0/0:96,0:39:83.34:0,83,1156	0/0:76,0:31:76.58:0,77,959	0/1:33,8:44:99:157,0,106	0/0:17,2:19:18.95:0,19,335	0/0:36,1:38:67.11:0,67,940	0/0:44,0:44:99:0,110,1241	0/0:44,1:45:43.94:0,44,817	0/1:39,7:58:99:185,0,883	0/1:25,10:41:99:142,0,227	0/0:46,1:47:36.03:0,36,1046	0/0:44,3:47:68.01:0,68,835	0/0:37,1:38:44.16:0,44,821	0/0:61,1:62:39.32:0,39,1241	0/0:49,1:50:42:0,42,1088	0/0:23,2:25:1.13:0,1,634	0/0:16,0:17:37.28:0,37,486	0/0:24,0:24:31.67:0,32,882	0/1:24,13:44:99:314,0,335	0/0:55,0:55:99:0,117,1608	0/1:41,7:50:99:175,0,417	0/1:24,8:37:99:137,0,247	0/0:40,1:41:56.88:0,57,888	0/1:20,15:39:99:393,0,484	0/1:34,8:41:99:301,0,691	0/0:22,3:25:32.43:0,32,559	0/0:17,1:18:20.69:0,21,482
chr10	59395149	.	A	AC	116.86	PASS	AC=12;AF=0.300;AN=40;BaseQRankSum=-1.666;DP=58;FS=0.000;HRun=0;HaplotypeScore=15.3305;InbreedingCoeff=0.3286;MQ=68.01;MQ0=10;MQRankSum=-1.666;QD=8.35;ReadPosRankSum=0.067;VQSLOD=3.0447;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:2,0:1:0:0,0,0	./.	0/0:4,0:3:2.99:0,3,24	0/0:4,0:3:2.50:0,2,9	0/0:1,0:1:0:0,0,0	./.	1/1:0,1:1:3.01:34,3,0	0/0:5,0:4:0:0,0,1	0/0:1,3:4:0:0,0,0	1/1:2,1:3:3:28,3,0	./.	0/0:1,0:1:0:0,0,0	0/0:0,1:1:0:0,0,0	0/0:2,0:2:0:0,0,0	0/0:2,3:4:0:0,0,0	./.	./.	./.	1/1:3,0:1:2.98:22,3,0	1/1:1,2:3:2.94:33,3,0	1/1:1,0:1:2.96:19,3,0	./.	0/0:3,0:1:0:0,0,0	0/0:1,2:3:0:0,0,0	0/0:3,0:3:0:0,0,0	1/1:1,2:2:6.01:63,6,0	0/0:1,0:1:0:0,0,0	./.
chr10	59395165	.	A	ACAC	2380.65	PASS	AB=0.790;AC=6;AF=0.107;AN=56;BaseQRankSum=10.180;DP=828;FS=83.911;HRun=0;HaplotypeScore=417.3340;InbreedingCoeff=-0.1353;MQ=36.42;MQ0=4;MQRankSum=-7.893;QD=10.13;ReadPosRankSum=-3.216;VQSLOD=0.6740;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,2:19:29.46:0,29,470	0/0:13,3:16:3.42:0,3,222	0/0:22,0:11:30.09:0,30,420	0/0:23,0:15:45.15:0,45,672	0/0:28,10:38:13.59:0,14,309	0/0:16,15:31:38.13:0,38,563	0/0:25,3:28:53.01:0,53,801	0/1:27,13:40:99:743,0,914	0/0:19,9:28:15.47:0,15,343	0/1:58,18:78:99:1187,0,1254	0/0:26,5:32:28.08:0,28,469	0/0:20,16:36:37.27:0,37,804	0/1:12,9:21:17.77:18,0,345	0/0:17,6:23:30.01:0,30,574	0/0:20,10:30:31.50:0,31,569	0/0:23,20:43:24.28:0,24,795	0/0:10,1:11:11.50:0,11,267	0/0:9,1:10:6.58:0,7,275	0/1:22,4:25:99:249,0,592	0/0:42,5:47:57.50:0,57,1117	0/0:8,0:8:18.06:0,18,300	0/0:27,13:40:39.08:0,39,631	0/0:27,12:40:22.93:0,23,596	0/0:19,2:21:15.38:0,15,279	0/0:30,6:37:46.83:0,47,830	0/1:36,5:41:99:265,0,1209	0/1:19,9:27:41.93:42,0,665	0/0:7,1:8:23.86:0,24,340
chr10	59395188	.	AT	A	234.28	PASS	AB=0.730;AC=1;AF=0.018;AN=56;BaseQRankSum=11.949;DP=967;FS=111.784;HRun=2;HaplotypeScore=346.6510;InbreedingCoeff=-0.0232;MQ=41.63;MQ0=3;MQRankSum=-7.931;QD=2.79;ReadPosRankSum=4.299;VQSLOD=0.5300;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,1:27:60.42:0,60,751	0/0:9,5:14:7.13:0,7,283	0/0:43,0:32:76.17:0,76,1220	0/0:35,0:26:78.26:0,78,1148	0/0:33,16:53:77.39:0,77,1004	0/0:17,13:30:38.33:0,38,551	0/0:28,1:29:65.25:0,65,831	0/0:43,3:46:68.04:0,68,1513	0/0:28,10:38:74.27:0,74,908	0/1:53,29:84:99:309,0,1619	0/0:17,12:30:27.48:0,27,296	0/0:28,11:39:95.17:0,95,1059	0/0:19,7:26:60.32:0,60,678	0/0:25,3:28:73.67:0,74,971	0/0:24,7:31:72.84:0,73,860	0/0:30,15:45:82.37:0,82,1064	0/0:12,2:15:21.94:0,22,483	0/0:13,1:15:10.32:0,10,481	0/0:30,1:30:55.63:0,56,1014	0/0:38,12:49:80.01:0,80,1045	0/0:12,0:12:30.49:0,30,401	0/0:25,17:43:80.36:0,80,697	0/0:26,17:43:61.96:0,62,599	0/0:19,3:22:50.03:0,50,625	0/0:32,11:46:89.85:0,90,979	0/0:45,6:51:80.61:0,81,1805	0/0:19,10:28:19.48:0,19,776	0/0:10,1:11:24.47:0,24,417
chr10	59395198	.	CT	C	603.47	PASS	AB=0.780;AC=4;AF=0.071;AN=56;BaseQRankSum=13.671;DP=970;FS=129.534;HRun=1;HaplotypeScore=324.4806;InbreedingCoeff=-0.1078;MQ=45.05;MQ0=1;MQRankSum=-10.766;QD=4.64;ReadPosRankSum=3.972;VQSLOD=0.4793;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,1:28:63.69:0,64,1002	0/1:9,6:15:22.54:23,0,330	0/0:41,3:35:50.03:0,50,1416	0/0:38,0:29:84.27:0,84,1278	0/0:42,7:53:25.29:0,25,1192	0/1:20,9:29:33.43:33,0,629	0/0:30,1:31:53.90:0,54,1012	0/0:40,1:41:79.28:0,79,1760	0/0:31,6:38:73.10:0,73,1074	0/1:54,19:75:99:633,0,1556	0/0:22,5:28:23.49:0,23,320	0/0:27,7:34:84.99:0,85,1227	0/0:20,5:25:42.16:0,42,900	0/0:29,2:31:76.24:0,76,1104	0/0:28,3:31:73.30:0,73,1090	0/0:35,12:47:42.50:0,43,1350	0/0:16,1:17:6.20:0,6,519	0/0:14,1:16:0.96:0,1,527	0/0:29,0:29:45.93:0,46,1137	0/0:39,10:50:80.46:0,80,1214	0/0:11,0:11:24.08:0,24,383	0/0:29,12:44:66.69:0,67,822	0/0:29,16:45:41.42:0,41,738	0/0:22,1:23:50.20:0,50,771	0/0:35,12:49:8.59:0,9,1049	0/0:49,5:54:3.69:0,4,1969	0/0:25,7:32:1.91:0,2,842	0/1:9,2:11:21.85:22,0,398
chr10	59396313	.	GTCTC	G	918.50	PASS	AB=0.902;AC=22;AF=0.440;AN=50;BaseQRankSum=0.216;DP=680;FS=0.000;HRun=0;HaplotypeScore=115.1489;InbreedingCoeff=0.3590;MQ=73.87;MQ0=8;MQRankSum=1.238;QD=2.93;ReadPosRankSum=0.661;VQSLOD=1.9893;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:37:39.11:0,39,592	0/0:12,0:12:6.98:0,7,101	./.	./.	0/0:15,0:18:2.74:0,3,12	0/0:24,0:23:14.04:0,14,104	0/1:22,0:22:33.10:33,0,82	0/0:51,0:51:26.53:0,27,291	0/0:22,0:34:21.50:0,21,335	0/1:20,0:20:24.82:25,0,130	0/1:16,1:17:6.63:28,0,7	0/0:15,0:15:11.42:0,11,76	0/0:25,0:25:11.63:0,12,144	1/1:17,3:20:6.02:83,6,0	0/1:27,9:36:0.46:127,0,0	1/1:22,3:26:8.11:119,8,0	0/0:14,0:25:12.02:0,12,168	0/1:15,1:25:38.07:38,0,123	0/0:15,0:13:5.81:0,6,49	1/1:16,0:16:5.97:90,6,0	0/1:47,0:46:33.05:33,0,88	1/1:14,0:13:3.01:45,3,0	./.	0/0:28,0:28:15.04:0,15,202	1/1:17,0:21:18.04:215,18,0	1/1:18,0:18:2.92:17,3,0	1/1:17,5:23:14.68:187,15,0	1/1:5,2:7:3.01:46,3,0
chr10	59396315	.	C	CAG	2722.98	PASS	AB=0.789;AC=14;AF=0.250;AN=56;BaseQRankSum=2.299;DP=733;FS=3.464;HRun=0;HaplotypeScore=116.0461;InbreedingCoeff=0.7828;MQ=70.58;MQ0=9;MQRankSum=0.332;QD=14.80;ReadPosRankSum=0.532;VQSLOD=3.6363;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:46:81.41:0,81,1095	0/0:12,0:12:27.23:0,27,368	0/0:29,0:19:42.13:0,42,704	0/0:38,0:25:51.39:0,51,806	0/0:23,0:23:0.90:0,1,414	1/1:27,0:26:63.21:1007,63,0	1/1:24,0:24:50.10:836,50,0	0/0:55,0:55:99:0,108,1403	0/0:35,0:35:56.91:0,57,778	0/1:25,0:25:46.95:47,0,557	0/0:20,0:19:38.35:0,38,512	1/1:13,0:13:36.08:535,36,0	1/1:6,24:31:14.21:243,14,0	0/0:22,0:21:48.12:0,48,647	0/0:37,0:37:81.18:0,81,1139	0/0:27,0:27:65.51:0,66,898	0/0:27,0:27:17.48:0,17,452	0/0:26,0:26:21.82:0,22,633	0/0:20,0:18:36.82:0,37,492	0/0:15,0:15:20.69:0,21,406	0/0:47,0:46:99:0,111,1646	1/1:9,7:15:2.74:12,3,0	0/1:3,7:11:0:0,0,0	1/1:8,22:37:16.93:220,17,0	0/0:22,0:22:15.98:0,16,540	0/0:17,0:17:45.61:0,46,671	0/0:21,0:21:55.12:0,55,723	0/0:8,0:8:12.50:0,12,161
chr10	59400110	.	T	TA	2938.07	PASS	AB=0.706;AC=20;AF=0.357;AN=56;BaseQRankSum=-7.272;DP=561;FS=0.000;HRun=11;HaplotypeScore=61.8942;InbreedingCoeff=0.3930;MQ=73.50;MQ0=1;MQRankSum=0.209;QD=10.57;ReadPosRankSum=0.706;VQSLOD=2.7123;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:68.27:0,68,699	0/0:9,0:12:19.95:0,20,143	0/1:46,0:24:21.71:22,0,86	0/1:27,0:17:25.78:26,0,54	0/0:21,1:23:25.37:0,25,367	0/0:19,0:20:49.76:0,50,370	0/0:18,1:19:12.94:0,13,274	0/0:26,0:26:21.56:0,22,257	0/0:12,0:14:24.94:0,25,171	1/1:2,13:16:21.79:379,22,0	0/1:9,12:21:12.82:240,0,13	0/0:10,0:10:23.89:0,24,184	0/0:12,0:13:28.91:0,29,211	0/1:7,14:21:9.82:321,0,10	1/1:5,11:16:21.04:214,21,0	0/1:7,6:13:5.20:134,0,5	0/0:39,0:41:79.66:0,80,603	0/0:14,0:15:34.90:0,35,261	1/1:9,6:16:3.30:193,3,0	0/1:7,15:22:2.99:330,0,3	1/1:1,11:13:14.86:136,15,0	0/0:17,0:19:37.71:0,38,271	0/0:14,0:14:29.33:0,29,211	0/0:20,0:21:43.83:0,44,329	0/1:6,17:23:12.02:399,0,12	0/1:4,15:19:18.59:349,0,19	1/1:6,13:19:33.07:335,33,0	1/1:2,1:3:5.97:50,6,0
chr10	59402404	.	T	TTTAA	4087.44	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-8.444;DP=692;FS=1.110;HRun=0;HaplotypeScore=110.7775;InbreedingCoeff=0.9992;MQ=61.56;MQ0=1;MQRankSum=-6.609;QD=57.57;ReadPosRankSum=-3.074;VQSLOD=4.4132;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,117,2130	1/1:1,8:9:24.04:571,24,0	0/0:23,0:22:54.15:0,54,957	0/0:20,0:17:41.81:0,42,727	0/0:37,0:37:99:0,99,1812	0/0:31,0:31:81.25:0,81,1422	0/0:21,0:21:57.20:0,57,1044	1/1:14,28:44:99:2604,102,0	0/0:15,0:15:45.15:0,45,822	0/0:33,0:33:93.32:0,93,1712	0/0:19,0:19:51.17:0,51,922	0/0:21,0:21:54.17:0,54,958	0/0:27,0:27:75.26:0,75,1333	0/0:22,0:22:66.22:0,66,1176	0/0:39,0:39:99:0,108,1971	0/0:18,0:18:51.17:0,51,938	1/1:1,16:18:36.59:913,37,0	0/0:15,0:15:45.15:0,45,818	0/0:31,0:31:87.28:0,87,1539	0/0:26,0:26:69.24:0,69,1263	0/0:26,0:26:75.26:0,75,1358	0/0:19,0:19:54.19:0,54,986	0/0:22,0:22:66.21:0,66,1177	0/0:25,0:25:72.25:0,72,1316	0/0:17,0:17:48.16:0,48,883	0/0:25,0:25:75.24:0,75,1324	0/0:32,0:32:93.30:0,93,1642	0/0:15,0:15:42.14:0,42,773
chr10	59404164	.	CA	C	2528.04	PASS	AB=0.850;AC=10;AF=0.179;AN=56;BaseQRankSum=4.073;DP=660;FS=2.218;HRun=10;HaplotypeScore=85.1268;InbreedingCoeff=0.7004;MQ=71.29;MQ0=0;MQRankSum=1.388;QD=15.61;ReadPosRankSum=2.832;VQSLOD=4.3046;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,51:57:99:1217,141,0	0/0:11,0:11:27.07:0,27,299	0/1:14,4:18:44.99:45,0,128	0/0:15,2:16:0.65:0,1,252	1/1:4,23:27:29.78:488,30,0	0/0:7,0:28:67.56:0,68,357	0/0:4,0:24:57.43:0,57,295	0/0:30,0:30:69.18:0,69,756	1/1:3,20:23:50.99:443,51,0	0/0:22,0:22:51.14:0,51,562	0/0:20,0:20:57.13:0,57,612	0/0:5,0:26:43.16:0,43,225	0/0:5,0:20:34.48:0,34,176	0/0:27,0:27:68.20:0,68,727	0/0:26,1:27:31.08:0,31,555	0/0:18,1:19:25.08:0,25,505	0/0:29,0:29:87.24:0,87,962	1/1:2,20:22:56.99:495,57,0	0/0:25,1:26:34.07:0,34,582	0/0:21,2:23:5.01:0,5,487	0/0:24,0:24:63.15:0,63,687	0/0:3,0:17:37.74:0,38,212	0/0:3,0:15:37.57:0,38,206	0/0:0,0:15:40.15:0,40,202	0/1:13,2:15:7.01:7,0,376	0/0:27,0:27:66.18:0,66,730	0/0:36,0:36:88.10:0,88,948	0/0:14,1:15:16.03:0,16,386
chr10	59410272	.	TCACA	T	2701.26	PASS	AB=0.822;AC=23;AF=0.411;AN=56;BaseQRankSum=5.562;DP=561;FS=2.869;HRun=0;HaplotypeScore=124.0649;InbreedingCoeff=0.5690;MQ=56.08;MQ0=11;MQRankSum=3.332;QD=10.12;ReadPosRankSum=3.940;VQSLOD=3.1196;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:15,0:20:11.48:22,0,11	0/0:6,0:6:15.03:0,15,293	0/0:37,0:16:3.01:0,3,40	0/0:38,0:16:12:0,12,183	1/1:9,0:25:11.99:112,12,0	1/1:10,5:16:15:210,15,0	1/1:9,12:21:21.54:333,22,0	0/1:32,0:31:3.44:3,0,402	1/1:4,0:14:24.03:223,24,0	0/0:25,0:23:54.18:0,54,1075	0/0:10,0:10:3.01:0,3,67	1/1:11,14:27:29.91:454,30,0	1/1:9,13:22:30.10:475,30,0	0/0:17,0:17:3:0,3,50	0/0:11,0:16:3.01:0,3,52	0/0:17,0:17:5.48:0,5,44	0/0:24,0:25:47.88:0,48,1011	0/1:7,0:14:20.19:72,0,20	0/0:11,0:11:18.05:0,18,309	0/0:6,0:17:5.80:0,6,118	1/1:20,0:20:0.47:1,0,0	1/1:6,8:14:15.05:237,15,0	1/1:8,8:17:0.09:223,0,0	1/1:10,14:24:33.11:522,33,0	0/0:19,0:18:5.08:0,5,132	0/0:26,0:24:46.95:0,47,964	0/0:17,0:16:21.25:0,21,433	0/0:4,0:12:5.98:0,6,66
chr10	59411027	.	CTG	C	1286.34	PASS	AB=0.942;AC=26;AF=0.481;AN=54;BaseQRankSum=4.355;DP=372;FS=1.800;HRun=0;HaplotypeScore=58.3116;InbreedingCoeff=0.5530;MQ=48.56;MQ0=7;MQRankSum=0.521;QD=7.89;ReadPosRankSum=1.360;VQSLOD=2.8814;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,5:12:0.55:164,1,0	0/0:3,0:3:9.03:0,9,145	0/0:33,0:7:11.87:0,12,158	./.	1/1:7,5:11:3.01:36,3,0	1/1:11,8:20:11.88:128,12,0	1/1:6,3:9:15.04:179,15,0	0/0:27,0:27:38.93:0,39,543	1/1:6,5:11:11.98:117,12,0	0/1:7,1:8:21.15:21,0,178	0/0:4,0:3:6.02:0,6,96	1/1:3,4:7:6.02:72,6,0	1/1:5,2:7:8.73:108,9,0	0/0:9,0:9:18.04:0,18,264	0/0:10,1:11:18.05:0,18,267	0/1:7,0:7:30.07:30,0,42	0/1:13,1:14:21.84:22,0,254	1/1:6,6:12:18.05:213,18,0	0/0:19,0:19:23.94:0,24,293	0/0:16,0:16:33.11:0,33,513	0/0:28,0:28:30.10:0,30,482	1/1:2,4:6:8.99:92,9,0	1/1:5,3:8:9.03:108,9,0	1/1:5,7:12:15.04:181,15,0	0/0:12,0:12:9.03:0,9,144	0/0:10,0:10:22.87:0,23,304	0/1:16,1:17:9.07:9,0,357	0/0:8,0:8:12.04:0,12,180
chr10	59411048	.	AATATATATATATATATAT	A	587.75	PASS	AB=0.774;AC=8;AF=0.182;AN=44;BaseQRankSum=3.179;DP=218;FS=2.684;HRun=0;HaplotypeScore=105.4301;InbreedingCoeff=0.1537;MQ=47.06;MQ0=6;MQRankSum=-1.277;QD=11.30;ReadPosRankSum=2.017;VQSLOD=1.7661;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:7,1:8:28.14:161,0,28	0/0:3,0:3:3.01:0,3,188	./.	./.	0/0:3,4:9:3:0,3,27	0/1:7,0:14:32.30:32,0,295	0/0:5,0:6:3:0,3,27	0/0:17,0:16:27.02:0,27,840	1/1:3,4:7:8.86:56,9,0	0/0:6,0:6:0:0,0,0	./.	0/0:4,0:4:3.01:0,3,39	0/1:4,0:5:6:89,0,6	0/0:5,0:5:3.01:0,3,95	0/0:6,0:7:6:0,6,111	0/0:2,0:3:3.01:0,3,90	0/0:11,0:11:15.03:0,15,588	1/1:5,2:10:11.96:334,12,0	0/0:5,0:6:12.03:0,12,199	./.	0/0:12,0:12:6.02:0,6,168	./.	0/0:3,0:5:2.98:0,3,21	./.	0/0:5,0:10:9.03:0,9,221	0/1:5,0:7:27.40:38,0,27	0/0:9,0:10:9.03:0,9,223	0/0:4,0:4:9.03:0,9,247
chr10	59412723	.	GGAGAGAGAGAGAGAGAGAGA	G	1114.36	PASS	AC=4;AF=0.074;AN=54;BaseQRankSum=4.281;DP=251;FS=5.217;HRun=0;HaplotypeScore=95.1089;InbreedingCoeff=0.4867;MQ=63.71;MQ0=13;MQRankSum=-3.949;QD=33.77;ReadPosRankSum=3.051;VQSLOD=1.5280;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:11,10:21:5.98:180,6,0	0/0:7,0:6:6.02:0,6,384	0/0:14,0:7:0.89:0,1,2	0/0:26,0:8:2.98:0,3,22	./.	0/0:11,0:10:11.82:0,12,440	0/0:2,0:3:6.02:0,6,369	0/0:13,0:9:14.08:0,14,361	1/1:3,8:12:21.07:1041,21,0	0/0:9,0:9:15.04:0,15,717	0/0:9,0:9:6.02:0,6,407	0/0:9,0:9:15.05:0,15,878	0/0:1,0:4:6.02:0,6,265	0/0:6,0:6:18.06:0,18,1367	0/0:7,0:6:12.04:0,12,833	0/0:9,0:9:18.06:0,18,1328	0/0:4,0:6:12.04:0,12,751	0/0:6,0:4:5.38:0,5,159	0/0:2,0:4:9.03:0,9,492	0/0:7,0:7:9.03:0,9,530	0/0:11,0:11:27.09:0,27,1910	0/0:10,0:10:9.03:0,9,445	0/0:5,0:4:9.03:0,9,461	0/0:3,0:4:6.02:0,6,327	0/0:7,0:7:9.03:0,9,522	0/0:8,0:8:21.04:0,21,868	0/0:7,0:6:9.03:0,9,428	0/0:3,0:3:6.02:0,6,445
chr10	59415347	.	G	GGA	732.23	PASS	AB=0.975;AC=30;AF=0.577;AN=52;BaseQRankSum=-1.372;DP=456;FS=3.832;HRun=0;HaplotypeScore=82.8194;InbreedingCoeff=-0.1241;MQ=43.99;MQ0=34;MQRankSum=-0.184;QD=2.15;ReadPosRankSum=-0.560;VQSLOD=1.5981;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:20:9.04:34,0,9	1/1:8,0:8:4.23:25,4,0	./.	./.	0/0:8,0:6:2.98:0,3,21	0/1:22,0:17:33.74:49,0,34	0/1:15,0:16:10.60:19,0,11	0/0:23,0:19:0.73:0,1,13	1/1:15,0:14:1.24:41,1,0	0/1:18,0:16:14.37:35,0,14	0/0:17,0:16:2.64:0,3,14	1/1:13,0:10:2.13:23,2,0	0/1:13,0:13:13.13:13,0,44	0/1:18,3:20:7.62:70,0,8	1/1:18,0:17:6:51,6,0	1/1:23,0:19:10.66:81,11,0	0/0:14,0:12:1.03:0,1,16	0/0:9,0:7:2.68:0,3,11	0/0:15,0:13:2.22:0,2,7	0/1:14,0:14:11.64:12,0,12	1/1:17,0:12:4.76:34,5,0	1/1:12,2:13:9.02:133,9,0	0/1:13,0:11:29.92:30,0,51	0/1:22,0:18:26.15:106,0,26	1/1:16,0:16:3:26,3,0	1/1:23,0:18:4.13:59,4,0	0/1:11,0:10:9.27:14,0,9	1/1:13,0:9:2.88:16,3,0
chr10	59418181	.	TA	T	1812.85	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=8.413;DP=645;FS=12.339;HRun=9;HaplotypeScore=68.8639;InbreedingCoeff=0.9917;MQ=72.98;MQ0=2;MQRankSum=-4.444;QD=20.14;ReadPosRankSum=4.358;VQSLOD=3.3528;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,40:42:99:986,108,0	0/0:10,0:10:30.06:0,30,325	0/0:19,0:14:26.65:0,27,201	0/0:15,0:14:12.79:0,13,97	1/1:3,15:18:45.02:411,45,0	0/0:28,0:28:75.19:0,75,847	0/0:24,0:24:72.09:0,72,784	0/0:24,0:24:60.11:0,60,639	1/1:2,15:17:39.01:356,39,0	0/0:4,0:24:57.70:0,58,305	0/0:3,0:17:40.30:0,40,214	0/0:21,0:21:51.11:0,51,556	0/0:14,0:14:39.09:0,39,432	0/0:23,0:23:63.17:0,63,718	0/0:14,0:15:44.89:0,45,464	0/0:27,0:27:75.20:0,75,849	0/0:30,0:30:81.14:0,81,887	1/1:1,12:13:24.01:219,24,0	0/0:30,0:30:66.19:0,66,755	0/0:15,0:15:45.10:0,45,497	0/0:21,0:21:60.15:0,60,667	0/0:38,0:38:93.16:0,93,1001	0/0:23,0:25:69:0,69,748	0/0:32,0:32:78.22:0,78,891	0/0:20,0:20:60.15:0,60,670	0/0:31,0:31:87.24:0,87,987	0/0:28,1:29:50.77:0,51,796	0/0:22,0:22:63.17:0,63,713
chr10	59419833	.	C	CAT	6986.46	PASS	AB=0.701;AC=20;AF=0.357;AN=56;BaseQRankSum=-12.926;DP=561;FS=0.377;HRun=0;HaplotypeScore=88.0815;InbreedingCoeff=0.4741;MQ=69.36;MQ0=5;MQRankSum=1.009;QD=25.97;ReadPosRankSum=-0.534;VQSLOD=5.6192;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:30:62.96:0,63,726	0/0:10,0:10:30.09:0,30,372	0/1:13,0:10:1.90:11,0,2	0/1:16,0:9:0.03:0,0,0	0/0:25,0:25:69.20:0,69,841	0/0:3,0:15:28.41:0,28,140	0/0:2,0:16:18.29:0,18,87	0/0:30,0:30:66.03:0,66,798	0/0:22,0:24:53.98:0,54,633	1/1:9,21:31:35:1043,35,0	0/1:7,9:15:52.87:225,0,53	0/0:2,0:20:42.61:0,43,210	0/0:4,0:20:39.53:0,40,191	0/1:4,13:17:4.05:459,0,4	0/1:8,19:27:54.42:730,0,54	0/1:3,13:16:13.13:320,0,13	0/0:22,0:22:48.11:0,48,564	0/0:14,0:14:39.12:0,39,484	1/1:6,11:17:39.12:604,39,0	1/1:2,16:18:45.15:738,45,0	0/1:11,8:18:99:479,0,104	0/0:4,0:17:31.25:0,31,154	0/0:3,0:21:48.01:0,48,233	0/0:4,0:25:42.35:0,42,206	0/1:5,20:25:17.22:780,0,17	1/1:8,15:22:7.94:652,8,0	1/1:4,18:22:10.96:701,11,0	1/1:1,8:9:15.05:246,15,0
chr10	59419939	.	A	ATG	12002.55	PASS	AB=0.764;AC=41;AF=0.759;AN=54;BaseQRankSum=-3.898;DP=880;FS=0.000;HRun=0;HaplotypeScore=86.3685;InbreedingCoeff=0.6693;MQ=47.28;MQ0=76;MQRankSum=6.549;QD=16.37;ReadPosRankSum=6.017;VQSLOD=4.6481;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:13,34:46:3.01:51,3,0	0/0:7,0:6:12.04:0,12,156	0/0:16,0:6:18.06:0,18,228	0/0:11,0:2:6.01:0,6,57	./.	1/1:17,8:25:30.10:496,30,0	0/1:8,17:23:0:0,0,0	0/0:61,0:46:45.86:0,46,1023	1/1:36,2:37:3.19:94,3,0	1/1:35,9:36:61.40:1286,61,0	1/1:14,6:17:33.11:531,33,0	1/1:27,11:31:54.07:842,54,0	1/1:10,18:26:27.09:457,27,0	1/1:8,25:31:24.08:396,24,0	1/1:24,5:27:35.99:578,36,0	1/1:25,19:40:49.12:1063,49,0	0/0:25,0:22:33.44:0,33,596	0/1:26,0:23:10.96:356,0,11	0/1:13,9:18:3.07:403,0,3	1/1:27,6:31:48.16:772,48,0	1/1:36,43:73:5.87:634,6,0	1/1:7,20:24:6.02:102,6,0	1/1:6,10:15:12.04:204,12,0	1/1:32,9:35:39.05:621,39,0	1/1:26,8:29:66.21:1072,66,0	1/1:30,7:30:54.09:1000,54,0	1/1:16,5:19:33.11:517,33,0	1/1:14,5:17:38.57:529,39,0
chr10	59419969	.	ATG	A	122.25	PASS	AB=0.980;AC=6;AF=0.115;AN=52;BaseQRankSum=3.582;DP=852;FS=28.381;HRun=0;HaplotypeScore=137.6741;InbreedingCoeff=0.0692;MQ=41.73;MQ0=107;MQRankSum=0.009;QD=0.71;ReadPosRankSum=-2.357;VQSLOD=0.7522;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:46,0:42:14.11:23,0,14	0/0:9,0:7:7.63:0,8,69	./.	./.	1/1:24,0:19:2.88:15,3,0	0/0:18,0:18:14.79:0,15,194	0/0:34,0:24:2.23:0,2,21	0/0:56,0:45:74.36:0,74,859	0/1:37,1:36:60.57:61,0,84	0/0:44,0:33:55.21:0,55,631	0/0:19,0:15:18.06:0,18,267	0/0:41,0:32:24.34:0,24,349	0/0:23,0:18:24.25:0,24,379	0/0:31,0:26:25.57:0,26,344	0/1:29,0:22:14.45:14,0,115	0/0:43,0:38:45.26:0,45,669	0/0:27,1:24:5.56:0,6,402	0/1:33,2:31:53.43:124,0,53	0/0:19,0:16:14.36:0,14,230	0/0:28,0:24:29.65:0,30,384	0/0:91,0:79:44.41:0,44,584	0/0:28,1:24:6.02:0,6,93	0/0:16,0:14:6:0,6,70	0/0:52,0:41:35.23:0,35,279	0/0:25,0:20:35.99:0,36,464	0/0:35,0:24:36.29:0,36,533	0/0:22,0:19:13.21:0,13,141	0/0:13,0:8:8.31:0,8,133
chr10	59419983	.	ATGTG	A	1002.74	PASS	AB=0.991;AC=25;AF=0.521;AN=48;BaseQRankSum=-0.761;DP=818;FS=15.022;HRun=0;HaplotypeScore=146.7978;InbreedingCoeff=0.0957;MQ=40.19;MQ0=106;MQRankSum=2.678;QD=1.72;ReadPosRankSum=-1.816;VQSLOD=1.4396;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:42:19.75:0,20,188	0/0:8,0:6:8.83:0,9,62	./.	./.	0/0:23,0:18:9.01:0,9,116	1/1:18,0:18:5.08:90,5,0	1/1:34,0:24:1.55:6,2,0	0/0:47,0:39:9.45:0,9,84	0/1:40,0:38:15.33:15,0,223	0/1:41,0:30:66.63:85,0,67	1/1:21,0:17:0.89:2,1,0	1/1:38,1:30:3.14:67,3,0	0/1:24,0:19:11.26:69,0,11	0/1:30,0:25:14.40:22,0,14	1/1:29,0:21:6.54:42,7,0	0/1:40,0:36:18.02:18,0,24	0/0:24,0:19:5.99:0,6,49	0/0:32,0:29:28.23:0,28,217	0/1:17,0:15:15.19:38,0,15	0/1:30,0:27:17.44:31,0,17	1/1:95,0:83:15.35:170,15,0	./.	0/0:14,0:12:3.46:0,3,25	1/1:41,6:37:6.90:338,7,0	1/1:20,0:16:12.38:100,12,0	0/1:35,0:23:35.82:36,0,48	0/1:20,0:18:0.44:28,0,0	./.
chr10	59420333	.	GTT	G	2241.28	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=10.398;DP=612;FS=2.270;HRun=15;HaplotypeScore=85.6204;InbreedingCoeff=0.8841;MQ=70.10;MQ0=1;MQRankSum=-0.882;QD=9.15;ReadPosRankSum=8.585;VQSLOD=1.5631;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,1:37:37.87:194,38,0	0/0:7,1:7:12.01:0,12,130	0/0:20,0:14:9.10:0,9,175	0/1:17,0:15:7.85:8,0,125	1/1:5,2:18:24.80:120,25,0	1/1:7,14:21:32.65:335,33,0	1/1:5,16:22:35.60:302,36,0	0/0:18,0:21:47.10:0,47,554	1/1:3,0:21:43.85:188,44,0	0/0:19,0:21:46.95:0,47,514	0/0:16,0:16:38.23:0,38,404	1/1:7,18:25:35.83:317,36,0	1/1:5,14:20:26.75:282,27,0	0/0:17,0:17:45.14:0,45,593	0/0:26,0:27:51.13:0,51,648	0/0:26,0:27:75.19:0,75,953	0/0:36,0:35:82.18:0,82,950	1/1:6,0:23:38.33:165,38,0	0/0:22,0:22:54.14:0,54,693	0/0:27,0:30:65.56:0,66,716	0/0:25,0:28:49.46:0,49,450	1/1:13,10:23:23.64:211,24,0	1/1:3,12:15:31.24:285,31,0	1/1:0,2:2:6:53,6,0	0/0:23,0:25:65.57:0,66,754	0/0:28,0:32:63.05:0,63,694	0/0:33,0:36:90.18:0,90,1076	0/0:1,0:1:3:0,3,28
chr10	59420599	.	GGT	G	4889.76	PASS	AB=0.853;AC=31;AF=0.554;AN=56;BaseQRankSum=10.430;DP=727;FS=0.000;HRun=0;HaplotypeScore=91.1602;InbreedingCoeff=0.1726;MQ=66.17;MQ0=6;MQRankSum=1.427;QD=9.09;ReadPosRankSum=2.789;VQSLOD=4.5680;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:44,5:49:28.22:28,0,908	0/0:15,0:15:18.06:0,18,277	0/0:25,0:16:8.01:0,8,95	0/0:42,0:18:11.98:0,12,123	0/1:21,1:23:4.66:5,0,311	0/1:14,5:19:67.39:67,0,350	0/1:26,2:28:17.82:18,0,613	0/0:33,0:33:22.22:0,22,516	0/1:20,6:27:72.52:73,0,438	1/1:7,12:21:41.76:429,42,0	0/1:5,6:12:22.92:174,0,23	0/1:19,4:23:52.29:52,0,593	0/0:21,1:23:19.69:0,20,735	1/1:10,15:27:44.62:456,45,0	1/1:11,13:27:50.64:525,51,0	1/1:9,14:26:44.63:456,45,0	0/1:28,4:32:11.78:12,0,733	0/1:24,1:25:7.56:8,0,595	0/1:18,4:22:7.83:140,0,8	1/1:7,15:25:38.98:386,39,0	1/1:14,38:53:78.05:876,78,0	0/0:32,1:33:13.60:0,14,554	0/0:16,0:17:0.57:0,1,451	0/1:28,5:35:99:128,0,708	1/1:6,8:15:23.69:255,24,0	1/1:11,13:24:38.60:424,39,0	1/1:7,15:22:30.08:345,30,0	1/1:1,1:1:3.01:34,3,0
chr10	59420865	.	G	GAGTGGCTC	10169.40	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-3.116;DP=749;FS=1.365;HRun=0;HaplotypeScore=189.0438;InbreedingCoeff=0.9948;MQ=79.84;MQ0=0;MQRankSum=-14.522;QD=83.36;ReadPosRankSum=0.166;VQSLOD=5.0120;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:25,17:47:86.31:3057,86,0	0/0:14,0:14:42.14:0,42,1175	0/0:38,0:38:99:0,108,2791	0/0:27,0:27:56.17:0,56,1595	1/1:5,15:24:39.13:1705,39,0	0/0:26,0:26:63.22:0,63,1748	0/0:22,0:22:66.21:0,66,1681	0/0:26,0:26:63.22:0,63,1659	1/1:8,28:39:99:4092,99,0	0/0:35,0:35:96.33:0,96,2631	0/0:13,0:13:36.12:0,36,999	0/0:29,0:29:84.29:0,84,2331	0/0:25,0:25:72.25:0,72,2003	0/0:22,0:22:60.21:0,60,1616	0/0:32,0:32:93.32:0,93,2521	0/0:27,0:27:23.57:0,24,2036	0/0:38,0:38:99:0,108,2911	1/1:5,6:12:30.10:1316,30,0	0/0:27,0:27:81.28:0,81,2204	0/0:21,0:21:54.17:0,54,1419	0/0:45,0:45:99:0,132,3570	0/0:37,0:37:99:0,102,2804	0/0:18,0:18:48.16:0,48,1343	0/0:22,0:22:57.20:0,57,1559	0/0:19,0:19:54.19:0,54,1488	0/0:31,0:31:90.31:0,90,2506	0/0:27,0:27:75.26:0,75,2063	0/0:6,0:6:15.05:0,15,418
chr10	59421544	.	G	GA	12405.05	PASS	AB=0.625;AC=50;AF=0.893;AN=56;BaseQRankSum=-4.385;DP=598;FS=8.103;HRun=10;HaplotypeScore=98.0495;InbreedingCoeff=0.5627;MQ=58.07;MQ0=2;MQRankSum=-3.469;QD=21.88;ReadPosRankSum=2.980;VQSLOD=5.0862;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,33:39:62.57:871,63,0	1/1:4,5:9:15.04:160,15,0	0/0:20,0:16:22.97:0,23,273	0/0:11,0:5:8.86:0,9,70	1/1:8,19:28:19.46:431,19,0	1/1:4,8:12:2.42:231,2,0	1/1:12,19:31:47.12:680,47,0	1/1:11,20:31:53.54:538,54,0	1/1:4,7:12:26.90:266,27,0	1/1:6,19:25:48.12:510,48,0	1/1:4,15:19:45.07:466,45,0	1/1:1,17:18:21.59:424,22,0	0/1:1,11:12:0.45:200,0,0	1/1:3,9:12:25.88:260,26,0	1/1:6,18:25:59.90:597,60,0	1/1:6,13:20:53.95:536,54,0	1/1:9,27:36:25.27:868,25,0	1/1:1,18:19:45.11:480,45,0	0/1:10,6:15:43.86:187,0,44	1/1:9,19:28:19.87:608,20,0	1/1:4,9:13:30.04:307,30,0	1/1:1,16:17:45.11:480,45,0	1/1:2,19:21:3.39:424,3,0	1/1:7,35:43:92.32:1017,92,0	1/1:5,13:16:36.09:384,36,0	1/1:13,18:31:64.86:666,65,0	1/1:6,15:22:56.94:577,57,0	1/1:4,5:9:24.01:235,24,0
chr10	59421562	.	G	GACAACA	12833.98	PASS	AB=0.714;AC=23;AF=0.411;AN=56;BaseQRankSum=-4.119;DP=667;FS=14.607;HRun=0;HaplotypeScore=173.2529;InbreedingCoeff=0.9213;MQ=60.77;MQ0=0;MQRankSum=-13.558;QD=47.71;ReadPosRankSum=-1.011;VQSLOD=3.6552;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,111,2200	0/0:10,0:10:21.07:0,21,406	0/0:31,0:28:48.35:0,48,970	0/0:16,0:15:33.11:0,33,552	0/0:25,0:25:66.23:0,66,1329	0/0:19,0:19:36.12:0,36,680	0/0:23,0:23:60.17:0,60,1208	0/0:40,0:40:75.25:0,75,1460	0/0:16,0:16:42.13:0,42,810	1/1:19,7:27:45.62:1213,46,0	1/1:6,14:20:42.14:1018,42,0	0/0:21,0:21:48.16:0,48,1004	0/0:13,0:13:24:0,24,491	1/1:6,9:16:21.07:696,21,0	1/1:14,13:29:36.12:1011,36,0	1/1:4,17:23:45.15:1325,45,0	0/0:36,0:36:84.20:0,84,1585	0/0:24,0:24:57.20:0,57,1170	0/1:12,7:19:25.96:631,0,26	1/1:12,16:29:54.18:1434,54,0	1/1:9,8:18:15.05:367,15,0	0/0:21,0:21:45.13:0,45,918	0/0:20,0:20:28.39:0,28,582	0/0:41,0:41:84.22:0,84,1638	1/1:8,9:17:31.91:861,32,0	1/1:10,23:37:90.29:2505,90,0	1/1:9,15:24:42.14:1272,42,0	1/1:5,4:9:18.06:501,18,0
chr10	59425272	.	G	GC	5705.66	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=6.824;DP=686;FS=2.116;HRun=0;HaplotypeScore=75.8483;InbreedingCoeff=0.9970;MQ=71.03;MQ0=0;MQRankSum=-0.561;QD=45.28;ReadPosRankSum=2.362;VQSLOD=5.0079;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,46:47:99:2110,132,0	0/0:6,0:6:18.06:0,18,248	0/0:24,0:22:66.22:0,66,913	0/0:19,0:18:29.27:0,29,422	1/1:1,28:29:75.26:1199,75,0	0/0:14,0:14:42.14:0,42,586	0/0:23,0:23:69.23:0,69,965	0/0:29,0:29:84.25:0,84,1150	1/1:0,25:25:75.26:1198,75,0	0/0:27,0:27:78.25:0,78,1071	0/0:16,0:16:48.16:0,48,671	0/0:32,0:32:96.30:0,96,1314	0/0:27,0:27:81.25:0,81,1115	0/0:22,0:22:66.22:0,66,923	0/0:31,0:31:93.30:0,93,1284	0/0:33,0:33:99:0,99,1384	0/0:36,0:36:99:0,105,1466	1/1:0,25:25:75.26:1199,75,0	0/0:28,0:28:81.27:0,81,1131	0/0:24,0:24:72.24:0,72,1002	0/0:39,0:39:99:0,117,1636	0/0:26,0:26:78.26:0,78,1087	0/0:16,0:16:48.16:0,48,671	0/0:14,0:14:42.14:0,42,587	0/0:13,0:13:39.11:0,39,526	0/0:24,0:24:72.24:0,72,1007	0/0:28,0:26:84.26:0,84,1156	0/0:9,0:9:24.08:0,24,336
chr10	59426230	.	A	ACTGCGCGTGGACCAAATCTCAGCT	13009.17	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=2.468;DP=736;FS=3.385;HRun=0;HaplotypeScore=397.8480;InbreedingCoeff=0.9952;MQ=79.38;MQ0=1;MQRankSum=-11.489;QD=100.07;ReadPosRankSum=-0.384;VQSLOD=3.7348;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:17,5:51:48.16:3725,48,0	0/0:11,0:11:33.10:0,33,1756	0/0:22,0:22:60.03:0,60,2429	0/0:18,0:18:38.30:0,38,1694	1/1:7,4:21:15.24:806,15,0	0/0:25,0:25:72.21:0,72,4146	0/0:40,0:40:99:0,108,5518	0/0:20,0:20:57.17:0,57,2513	1/1:18,8:40:66.23:5698,66,0	0/0:21,0:21:60.20:0,60,3362	0/0:18,0:18:51.13:0,51,2598	0/0:30,0:30:87.25:0,87,4861	0/0:23,0:23:63.20:0,63,3395	0/0:26,0:26:72.20:0,72,4039	0/0:40,0:40:99:0,120,7093	0/0:21,0:21:60.21:0,60,3632	0/0:31,0:31:87.28:0,87,5048	1/1:7,3:17:27.09:2780,27,0	0/0:31,0:31:72.21:0,72,2909	0/0:27,0:27:78.22:0,78,4327	0/0:44,0:44:99:0,105,5956	0/0:17,0:17:39.12:0,39,2032	0/0:22,0:22:57.65:0,58,3216	0/0:24,0:24:72.22:0,72,4129	0/0:20,0:20:57.17:0,57,3000	0/0:42,0:42:99:0,120,6629	0/0:21,0:20:57.20:0,57,3642	0/0:12,0:12:30.10:0,30,1889
chr10	59426685	.	TTCTCTCTCTCTCTCTC	T	239.88	PASS	AC=6;AF=0.231;AN=26;BaseQRankSum=2.488;DP=472;FS=18.177;HRun=0;HaplotypeScore=156.1456;InbreedingCoeff=0.4098;MQ=48.25;MQ0=30;MQRankSum=-1.685;QD=6.15;ReadPosRankSum=-0.642;VQSLOD=1.6976;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:31:15.05:0,15,319	./.	./.	./.	./.	0/0:13,0:12:2.98:0,3,21	./.	./.	0/0:16,0:16:2.37:0,2,8	0/0:14,0:14:3.74:0,4,13	./.	./.	./.	./.	0/0:20,0:20:3:0,3,25	./.	0/0:21,0:20:12.04:0,12,503	0/0:14,0:13:15.05:0,15,406	0/0:14,0:13:0.47:0,0,1	./.	0/0:31,0:31:3:0,3,25	1/1:12,2:14:3.01:130,3,0	./.	1/1:13,0:15:3.01:72,3,0	./.	0/0:18,0:14:6.02:0,6,114	1/1:7,2:8:2.80:130,3,0	./.
chr10	59427204	.	CCA	C	2593.05	PASS	AB=0.858;AC=14;AF=0.250;AN=56;BaseQRankSum=-4.755;DP=854;FS=2.726;HRun=0;HaplotypeScore=259.5189;InbreedingCoeff=0.4615;MQ=39.25;MQ0=24;MQRankSum=0.992;QD=11.03;ReadPosRankSum=-2.298;VQSLOD=2.5653;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:44.90:0,45,666	0/1:11,1:13:16.50:17,0,161	0/0:52,0:10:9.79:0,10,299	0/1:24,0:6:0.28:0,0,81	0/0:33,1:33:5.21:0,5,516	1/1:5,10:15:20.55:222,21,0	0/1:21,10:31:19.60:345,0,20	0/0:43,0:38:70.62:0,71,828	0/0:43,0:43:82.21:0,82,1224	0/0:35,0:47:95.62:0,96,644	0/0:12,0:29:33.16:0,33,298	1/1:17,11:28:34.09:507,34,0	1/1:15,13:27:42:561,42,0	0/0:15,0:27:49.82:0,50,400	0/0:18,0:27:49.73:0,50,462	0/0:11,0:33:54.94:0,55,481	0/0:20,0:21:6.12:0,6,537	0/1:8,1:9:10.35:10,0,215	0/0:37,0:35:33.88:0,34,344	0/0:26,0:35:45.65:0,46,350	0/0:27,0:48:78.54:0,79,850	0/1:20,10:29:41.09:270,0,41	0/1:13,5:21:5.13:166,0,5	1/1:15,18:34:49.18:669,49,0	0/0:20,0:23:26.99:0,27,191	0/0:43,0:55:99:0,113,813	0/0:9,0:15:37.69:0,38,296	0/0:6,0:12:29.21:0,29,245
chr10	59427915	.	G	GT	1376.94	PASS	AB=0.788;AC=8;AF=0.143;AN=56;BaseQRankSum=-3.351;DP=579;FS=34.025;HRun=9;HaplotypeScore=52.6857;InbreedingCoeff=0.6891;MQ=56.50;MQ0=4;MQRankSum=-2.234;QD=20.86;ReadPosRankSum=-0.479;VQSLOD=1.6860;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,18:18:45.12:498,45,0	0/0:14,0:14:38.97:0,39,335	0/0:20,0:10:11.45:0,11,112	0/1:10,0:3:2.64:3,0,20	0/1:4,11:15:16.01:296,0,16	0/0:27,0:27:71.98:0,72,625	0/0:15,0:15:35.99:0,36,312	0/0:35,0:35:86.95:0,87,751	1/1:0,10:10:30.08:332,30,0	0/0:37,0:38:92:0,92,787	0/0:21,0:21:59.99:0,60,521	0/0:15,1:16:8.78:0,9,299	0/0:21,0:21:50.98:0,51,443	0/0:12,2:14:2.80:0,3,253	0/0:14,0:14:41.99:0,42,365	0/0:19,0:19:44.97:0,45,391	0/0:31,2:33:23.61:0,24,663	1/1:0,13:12:36.10:398,36,0	0/0:23,0:21:50.97:0,51,440	0/0:30,0:30:77.92:0,78,666	0/0:12,0:14:28.06:0,28,220	0/0:33,0:33:92.96:0,93,803	0/0:17,0:17:41.97:0,42,361	0/0:12,0:14:34.06:0,34,272	0/0:36,0:36:92.94:0,93,800	0/0:24,0:24:62.95:0,63,541	0/0:30,0:30:68.98:0,69,599	0/0:5,0:5:15:0,15,130
chr10	59428351	.	GCTTACTGTAGGCAGT	G	5241.65	PASS	AB=0.958;AC=9;AF=0.161;AN=56;BaseQRankSum=10.714;DP=621;FS=0.000;HRun=0;HaplotypeScore=252.0481;InbreedingCoeff=0.8604;MQ=64.88;MQ0=0;MQRankSum=-9.990;QD=50.40;ReadPosRankSum=0.280;VQSLOD=3.8585;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,29:36:60.21:2420,60,0	0/0:6,0:6:18.06:0,18,1277	0/0:21,0:19:50.64:0,51,2370	0/0:19,0:19:51.17:0,51,2773	1/1:2,19:20:20.92:504,21,0	0/0:24,0:24:72.24:0,72,4671	0/0:27,0:27:81.28:0,81,5880	0/0:23,0:23:63.22:0,63,4215	1/1:3,13:16:36.12:1619,36,0	0/0:32,0:32:93.31:0,93,6303	0/0:17,0:17:51.18:0,51,3629	0/0:25,0:25:75.24:0,75,4858	0/0:28,0:28:81.28:0,81,5664	0/0:24,0:24:72.25:0,72,5108	0/0:23,0:23:69.23:0,69,4954	0/1:22,1:23:24.23:24,0,4424	0/0:25,0:25:72.25:0,72,5285	1/1:2,6:8:15.05:675,15,0	0/0:26,0:26:78.27:0,78,4594	0/0:21,0:21:57.18:0,57,3938	0/0:33,0:33:93.32:0,93,6466	0/0:19,0:19:54.19:0,54,3960	0/0:10,0:10:30.10:0,30,1957	0/0:21,0:21:54.18:0,54,3722	0/0:22,0:22:66.23:0,66,4815	0/0:27,0:27:81.28:0,81,5827	0/0:34,0:34:99:0,102,7377	0/0:10,0:10:30.10:0,30,1904
chr10	59428909	.	GCACACACA	G	3748.85	PASS	AB=0.571;AC=13;AF=0.250;AN=52;BaseQRankSum=5.422;DP=709;FS=14.741;HRun=0;HaplotypeScore=198.8219;InbreedingCoeff=0.8464;MQ=57.50;MQ0=7;MQRankSum=-10.014;QD=20.26;ReadPosRankSum=2.967;VQSLOD=2.1217;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:42:16.48:0,16,238	0/0:7,0:17:36.08:0,36,702	./.	./.	0/0:12,0:27:10.80:0,11,199	1/1:7,15:23:3.63:564,4,0	1/1:12,18:31:12.51:286,13,0	0/0:18,0:24:32.52:0,33,441	0/0:8,0:27:38.94:0,39,1154	0/0:30,0:32:84.26:0,84,2692	0/0:17,0:17:33.11:0,33,1292	1/1:7,18:25:27.09:674,27,0	1/1:4,17:22:44.98:1052,45,0	0/0:20,0:23:51.16:0,51,1727	0/0:20,0:20:51.17:0,51,1899	0/0:15,0:15:39.13:0,39,1402	0/0:14,0:48:84.15:0,84,1451	0/0:9,0:20:24.04:0,24,604	0/0:18,0:19:27.05:0,27,790	0/0:31,0:29:66.21:0,66,2338	0/0:43,0:44:96.30:0,96,2901	1/1:5,23:29:27.97:667,28,0	0/1:6,18:24:6.81:357,0,7	1/1:10,19:31:6.49:150,6,0	0/0:25,0:30:68.95:0,69,2379	0/0:22,0:27:72.14:0,72,2249	0/0:15,0:18:30.10:0,30,976	0/0:15,0:15:42.10:0,42,1395
chr10	59430545	.	TACACACACACAC	T	1306.17	PASS	AB=0.771;AC=14;AF=0.269;AN=52;BaseQRankSum=5.118;DP=484;FS=0.000;HRun=0;HaplotypeScore=155.5280;InbreedingCoeff=0.6246;MQ=68.08;MQ0=12;MQRankSum=-5.294;QD=8.71;ReadPosRankSum=-0.192;VQSLOD=1.8172;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:42.14:0,42,1962	./.	./.	0/0:40,0:31:0:0,0,0	0/0:7,0:9:9.01:0,9,313	0/1:10,6:16:7.12:169,0,7	1/1:23,6:29:6.02:205,6,0	0/0:24,0:23:12.04:0,12,213	0/0:9,0:12:15.05:0,15,400	0/0:8,0:12:24.08:0,24,887	0/0:12,0:15:21.05:0,21,626	1/1:11,5:15:18.04:520,18,0	1/1:10,8:18:5.60:127,6,0	0/0:16,0:18:15.04:0,15,464	0/0:10,0:13:9.03:0,9,236	0/0:9,0:16:24.06:0,24,864	0/1:17,0:21:0.79:1,0,146	0/0:19,0:19:30.07:0,30,999	0/0:11,0:10:15.76:0,16,235	0/0:6,0:9:18.06:0,18,669	0/0:39,0:38:54.14:0,54,1888	1/1:10,4:14:6.49:155,6,0	1/1:7,3:10:5.75:189,6,0	1/1:18,7:25:3.90:95,4,0	0/0:9,0:10:2.99:0,3,24	0/0:12,0:13:30.57:0,31,1065	0/0:5,0:10:12.51:0,13,524	0/0:1,0:2:3.01:0,3,117
chr10	59430870	.	TA	T	3665.88	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=0.000;DP=479;FS=12.678;HRun=1;HaplotypeScore=72.1829;InbreedingCoeff=0.9874;MQ=82.66;MQ0=0;MQRankSum=-0.120;QD=37.41;ReadPosRankSum=1.139;VQSLOD=3.1388;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,114,1785	0/0:3,0:3:9.03:0,9,140	0/0:14,0:14:39.13:0,39,618	0/0:18,0:18:51.17:0,51,810	0/0:11,0:11:27.09:0,27,431	1/1:0,14:14:33.11:462,33,0	1/1:0,11:11:33.07:439,33,0	0/0:33,0:32:93.29:0,93,1421	0/0:17,0:16:48.16:0,48,765	0/0:28,0:28:84.29:0,84,1340	0/0:9,0:9:27.09:0,27,431	1/1:0,21:21:60.20:839,60,0	1/1:0,8:8:24.08:336,24,0	0/0:18,0:18:51.17:0,51,814	0/0:11,0:11:30.10:0,30,478	0/0:15,0:15:45.15:0,45,719	0/0:23,0:22:60.20:0,60,958	0/0:25,0:25:75.26:0,75,1198	0/0:19,0:19:57.19:0,57,886	0/0:15,0:15:45.15:0,45,719	0/0:9,0:9:27.09:0,27,431	1/1:2,14:16:45.11:606,45,0	1/1:0,11:11:27.05:355,27,0	1/1:0,17:16:45.15:629,45,0	0/0:20,0:20:60.20:0,60,957	0/0:16,0:16:42.14:0,42,671	0/0:30,0:30:90.31:0,90,1435	0/0:7,0:7:21.07:0,21,336
chr10	59430919	.	GGTTT	G	818.47	PASS	AB=0.882;AC=13;AF=0.232;AN=56;BaseQRankSum=1.500;DP=406;FS=2.696;HRun=0;HaplotypeScore=103.7321;InbreedingCoeff=0.8603;MQ=87.16;MQ0=6;MQRankSum=-3.621;QD=11.86;ReadPosRankSum=0.251;VQSLOD=2.7308;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:69.09:0,69,1027	0/0:4,0:4:9.02:0,9,132	0/0:38,0:27:55.38:0,55,575	0/0:40,0:21:33.10:0,33,316	0/0:9,0:9:23.96:0,24,363	0/1:13,2:15:3.15:202,0,3	1/1:11,2:12:26.72:225,27,0	0/0:26,0:26:38.88:0,39,476	0/0:7,0:7:17.99:0,18,276	0/0:24,0:24:60.07:0,60,757	0/0:8,0:8:18.52:0,19,283	1/1:10,0:10:14.01:105,14,0	1/1:3,0:3:5.97:46,6,0	0/0:9,0:9:26.92:0,27,340	0/0:9,0:8:21.03:0,21,255	0/0:6,0:6:14.93:0,15,140	0/0:11,0:9:23.53:0,24,177	0/0:15,0:15:35.95:0,36,717	0/0:20,0:19:46.37:0,46,586	0/0:11,0:11:27.03:0,27,381	0/0:6,0:6:5.98:0,6,48	1/1:7,0:7:17.91:138,18,0	1/1:11,2:12:24.04:188,24,0	1/1:8,0:6:11.94:96,12,0	0/0:20,0:19:45.04:0,45,759	0/0:18,0:18:40.35:0,40,437	0/0:22,0:22:23.13:0,23,555	0/0:6,0:5:15.05:0,15,277
chr10	59430921	.	TTTG	T	1546.77	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=-1.667;DP=436;FS=4.927;HRun=0;HaplotypeScore=99.0686;InbreedingCoeff=0.8449;MQ=82.98;MQ0=8;MQRankSum=-4.483;QD=22.10;ReadPosRankSum=-0.385;VQSLOD=3.3658;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:68.55:0,69,850	0/0:4,0:4:9.02:0,9,114	0/0:40,0:27:58.21:0,58,561	0/0:42,0:21:34.29:0,34,305	0/0:10,0:10:24.25:0,24,282	1/1:10,5:15:17.61:416,18,0	1/1:8,4:11:30:397,30,0	0/0:26,0:26:24.57:0,25,423	0/0:9,0:9:20.96:0,21,274	0/0:28,0:28:44.68:0,45,652	0/0:11,0:10:21.52:0,22,254	1/1:7,1:8:14.99:154,15,0	1/1:2,0:2:5.97:46,6,0	0/0:12,0:12:29.16:0,29,286	0/0:9,0:8:20.03:0,20,176	0/0:9,0:9:17.12:0,17,127	0/0:12,0:10:23.34:0,23,174	0/0:16,0:16:38.95:0,39,631	0/0:22,0:21:35.80:0,36,462	0/0:13,0:13:19.84:0,20,358	0/1:7,0:7:10.62:11,0,38	1/1:2,5:7:18.05:270,18,0	1/1:10,3:12:28.85:297,29,0	1/1:5,1:5:12.02:148,12,0	0/0:26,0:25:40.82:0,41,649	0/0:20,0:20:41.17:0,41,379	0/0:23,0:23:4.76:0,5,352	0/0:7,0:6:15.05:0,15,229
chr10	59430924	.	G	GTT	3062.53	PASS	AB=0.933;AC=31;AF=0.554;AN=56;BaseQRankSum=-1.728;DP=487;FS=7.181;HRun=14;HaplotypeScore=111.9553;InbreedingCoeff=0.5152;MQ=75.69;MQ0=10;MQRankSum=-2.451;QD=11.22;ReadPosRankSum=-3.231;VQSLOD=1.6467;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:28:8.59:0,9,233	1/1:2,0:3:3.47:29,3,0	0/0:40,0:26:3.74:0,4,91	0/0:47,0:19:0.43:0,0,42	0/0:12,0:11:2.66:0,3,78	0/1:19,0:19:40.66:47,0,41	0/0:14,0:13:6.75:0,7,57	1/1:29,0:30:22.44:133,22,0	0/0:9,0:9:12.28:0,12,74	1/1:27,2:30:53.10:510,53,0	1/1:9,3:13:20.30:185,20,0	0/0:11,0:11:1.03:0,1,10	0/1:4,0:4:0:0,0,0	1/1:11,1:14:1.55:131,2,0	1/1:9,1:10:17.99:189,18,0	1/1:10,0:9:10.24:83,10,0	1/1:11,0:9:0.82:13,1,0	0/0:15,0:15:12.76:0,13,214	1/1:19,3:23:48.25:413,48,0	1/1:12,1:15:25.65:198,26,0	1/1:6,0:6:5.92:39,6,0	0/0:9,0:8:1.04:0,1,34	0/0:16,0:15:8.40:0,8,50	0/0:11,0:9:2.61:0,3,13	1/1:22,7:28:42.67:492,43,0	1/1:18,3:22:38.65:375,39,0	1/1:23,0:23:39.80:364,40,0	0/1:6,0:7:11.58:37,0,12
chr10	59430950	.	GT	G	703.41	PASS	AB=0.811;AC=27;AF=0.482;AN=56;BaseQRankSum=-4.353;DP=451;FS=10.582;HRun=14;HaplotypeScore=81.3184;InbreedingCoeff=0.3990;MQ=51.58;MQ0=25;MQRankSum=-2.213;QD=2.78;ReadPosRankSum=0.303;VQSLOD=-0.6441;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:25:27.12:0,27,137	1/1:1,1:3:5:26,5,0	0/1:27,0:9:0.22:0,0,34	0/0:56,0:15:4.12:0,4,58	0/0:5,0:13:16.99:0,17,116	0/0:15,0:20:32.23:0,32,182	0/0:12,0:13:22.91:0,23,122	1/1:13,10:22:4.97:121,5,0	0/0:5,0:7:8.11:0,8,45	0/1:11,6:16:12.55:98,0,13	1/1:15,3:18:9.12:51,9,0	0/0:9,0:12:15.86:0,16,114	0/0:2,0:4:0:0,0,0	1/1:7,3:11:13.83:84,14,0	1/1:9,2:9:10.90:64,11,0	0/1:3,2:5:8.54:15,0,9	1/1:7,4:8:2.96:21,3,0	0/1:9,0:11:3.16:3,0,61	1/1:11,5:14:11.23:80,11,0	0/1:12,5:18:13.74:69,0,14	1/1:9,2:6:2.97:21,3,0	0/0:9,1:16:4.96:0,5,90	0/0:12,0:14:17.06:0,17,132	0/0:8,0:7:9.47:0,9,71	1/1:22,4:26:7.24:61,7,0	0/1:6,9:14:0.14:120,0,0	0/1:13,3:17:14.58:15,0,30	1/1:6,2:5:5.61:31,6,0
chr10	59431041	.	AG	A	11503.47	PASS	AB=0.833;AC=54;AF=0.964;AN=56;BaseQRankSum=-1.734;DP=423;FS=7.101;HRun=4;HaplotypeScore=108.6673;InbreedingCoeff=-0.0439;MQ=65.18;MQ0=8;MQRankSum=-3.009;QD=27.19;ReadPosRankSum=3.827;VQSLOD=3.7061;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,12:16:33.09:384,33,0	1/1:0,7:7:21.06:251,21,0	0/1:21,5:15:99:102,0,127	0/1:19,5:10:55.53:76,0,56	1/1:4,20:24:69.01:762,69,0	1/1:2,17:19:51.06:565,51,0	1/1:7,13:18:47.89:518,48,0	1/1:1,15:16:42.08:486,42,0	1/1:1,8:9:27.07:313,27,0	1/1:2,20:22:66.15:766,66,0	1/1:5,17:22:63.01:691,63,0	1/1:2,7:9:17.88:215,18,0	1/1:0,5:5:15.05:179,15,0	1/1:1,9:9:27.08:323,27,0	1/1:2,7:9:27.07:310,27,0	1/1:1,11:12:33.10:394,33,0	1/1:2,21:22:51.11:593,51,0	1/1:2,14:16:48.07:535,48,0	1/1:11,12:21:60.04:630,60,0	1/1:3,13:16:39.12:467,39,0	1/1:1,4:3:6.84:55,7,0	1/1:3,11:14:36.06:403,36,0	1/1:2,8:10:24.07:287,24,0	1/1:0,8:7:21.06:250,21,0	1/1:3,13:16:45.10:522,45,0	1/1:4,13:17:48.06:542,48,0	1/1:5,17:22:66.19:776,66,0	1/1:0,3:3:9.03:108,9,0
chr10	59431072	.	G	GTTTT	1270.14	PASS	AB=0.965;AC=18;AF=0.321;AN=56;BaseQRankSum=-5.003;DP=486;FS=2.248;HRun=0;HaplotypeScore=197.7798;InbreedingCoeff=-0.3185;MQ=57.82;MQ0=18;MQRankSum=3.562;QD=5.25;ReadPosRankSum=-8.251;VQSLOD=-0.5893;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:16,0:16:39.49:39,0,196	0/1:5,4:9:9.55:337,0,10	0/0:50,0:19:20.08:0,20,320	0/0:67,0:24:9.19:0,9,194	0/1:13,0:13:40.03:40,0,202	0/0:19,0:17:50.97:0,51,555	0/1:20,0:20:37.61:38,0,359	0/1:11,3:11:60.36:132,0,60	0/1:9,0:8:2.92:3,0,195	0/0:23,0:23:21.11:0,21,481	0/1:10,0:9:30.78:31,0,166	0/0:13,0:12:29.65:0,30,335	0/0:7,0:7:21.05:0,21,235	0/0:11,0:10:6.11:0,6,270	0/0:12,0:12:35.71:0,36,376	0/0:13,0:13:8.07:0,8,317	1/1:12,8:20:19.77:543,20,0	0/1:18,0:16:14.91:15,0,326	0/1:19,0:15:32.43:32,0,253	0/1:15,0:15:60.37:60,0,315	0/0:12,0:9:3.88:0,4,92	0/1:15,0:14:14.02:14,0,344	0/1:11,0:11:23.43:23,0,192	0/0:12,0:10:5.80:0,6,208	0/1:14,0:14:8.93:9,0,308	0/1:13,0:13:48.32:48,0,224	0/1:18,0:18:24.52:25,0,395	0/1:7,0:5:40.11:40,0,52
chr10	59431073	.	G	GT	131.38	PASS	AB=0.852;AC=5;AF=0.089;AN=56;BaseQRankSum=4.121;DP=516;FS=0.000;HRun=3;HaplotypeScore=200.1587;InbreedingCoeff=0.0715;MQ=56.37;MQ0=20;MQRankSum=-2.479;QD=1.00;ReadPosRankSum=-0.066;VQSLOD=-0.7370;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:34.72:0,35,207	0/1:5,4:9:1.93:78,0,2	0/0:52,2:18:13.35:0,13,158	0/1:70,0:25:31.03:31,0,92	0/0:14,0:14:33.83:0,34,181	0/0:19,0:17:48.81:0,49,282	0/0:21,0:21:47.72:0,48,244	0/1:12,3:12:2.73:3,0,71	0/0:9,0:8:19.53:0,20,104	0/0:25,0:25:54.04:0,54,236	0/1:11,0:10:0.53:1,0,79	0/0:13,0:12:29.16:0,29,176	0/0:7,0:7:20.49:0,20,128	0/0:12,0:11:28.67:0,29,156	0/0:12,0:12:32.88:0,33,199	0/0:14,0:14:19.44:0,19,174	0/1:14,8:22:36.97:121,0,37	0/0:20,0:18:38.94:0,39,199	0/0:22,0:17:35.29:0,35,170	0/0:16,0:16:35.75:0,36,195	0/0:12,0:9:8.35:0,8,49	0/0:15,0:14:38.23:0,38,220	0/0:14,0:12:19.42:0,19,101	0/0:13,0:11:20.26:0,20,121	0/0:14,0:14:36.80:0,37,197	0/0:14,0:14:15.13:0,15,153	0/0:19,0:19:31.63:0,32,236	0/0:7,0:5:5.64:0,6,30
chr10	59431093	.	TG	T	8119.15	PASS	AB=0.966;AC=53;AF=0.946;AN=56;BaseQRankSum=-2.147;DP=512;FS=13.080;HRun=4;HaplotypeScore=142.4855;InbreedingCoeff=0.5226;MQ=44.85;MQ0=51;MQRankSum=0.644;QD=18.66;ReadPosRankSum=0.571;VQSLOD=3.3735;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,15:16:26.73:200,27,0	1/1:0,8:8:23.44:177,23,0	0/0:76,1:13:23.85:0,24,410	0/1:82,3:18:41.03:41,0,465	1/1:1,7:8:15.80:131,16,0	1/1:1,16:16:44.60:327,45,0	1/1:2,16:17:47.93:526,48,0	1/1:1,6:3:6.02:80,6,0	1/1:4,6:8:17.05:242,17,0	1/1:4,15:18:51.02:674,51,0	1/1:1,16:16:36.66:329,37,0	1/1:3,10:12:26.79:308,27,0	1/1:0,7:7:21.06:269,21,0	1/1:3,11:13:32.90:329,33,0	1/1:1,11:12:35.78:345,36,0	1/1:1,14:15:41.95:473,42,0	1/1:2,15:17:37.34:439,37,0	1/1:1,16:15:39.52:483,40,0	1/1:5,12:11:29.31:370,29,0	1/1:2,14:16:39.87:456,40,0	1/1:3,11:10:16.16:146,16,0	1/1:2,16:16:33.54:223,34,0	1/1:1,9:8:8.99:100,9,0	1/1:4,11:14:26.47:213,26,0	1/1:2,11:12:35.89:370,36,0	1/1:0,10:10:30.10:400,30,0	1/1:4,11:13:35.81:387,36,0	1/1:0,5:3:6.02:82,6,0
chr10	59431095	.	T	TG	2994.40	PASS	AB=0.992;AC=46;AF=0.821;AN=56;BaseQRankSum=-4.294;DP=535;FS=14.723;HRun=1;HaplotypeScore=172.4228;InbreedingCoeff=0.2197;MQ=42.82;MQ0=54;MQRankSum=1.390;QD=6.81;ReadPosRankSum=4.839;VQSLOD=-0.7131;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:21:2.37:38,2,0	0/1:8,0:8:11.08:19,0,11	0/0:76,0:12:29.71:0,30,329	0/1:87,0:18:11.48:11,0,376	0/1:8,0:8:0.27:10,0,0	0/1:18,1:17:4.42:10,0,4	1/1:20,0:18:26.90:190,27,0	1/1:7,0:3:5.90:38,6,0	1/1:9,1:9:5.74:48,6,0	1/1:18,2:19:51.82:417,52,0	1/1:17,1:17:8.39:79,8,0	1/1:10,3:12:23.72:211,24,0	1/1:7,0:7:20.87:181,21,0	1/1:11,3:13:17.66:167,18,0	0/1:13,0:13:1.68:76,0,2	1/1:14,0:14:18.52:167,19,0	0/1:17,0:17:4.03:135,0,4	1/1:16,0:14:29.47:199,29,0	1/1:16,1:12:31.30:229,31,0	1/1:15,1:16:26.02:212,26,0	1/1:18,1:14:6.24:36,6,0	0/0:19,0:17:2.51:0,3,7	1/1:10,0:9:5.97:52,6,0	1/1:16,1:16:9.17:55,9,0	1/1:15,0:14:18.86:143,19,0	1/1:10,0:10:28.35:178,28,0	1/1:12,3:13:23.68:183,24,0	1/1:5,0:3:5.84:42,6,0
chr10	59431136	.	TGA	T	2595.38	PASS	AB=0.978;AC=42;AF=0.808;AN=52;BaseQRankSum=-6.861;DP=433;FS=6.252;HRun=0;HaplotypeScore=128.1102;InbreedingCoeff=0.0585;MQ=46.73;MQ0=26;MQRankSum=0.136;QD=6.92;ReadPosRankSum=-0.513;VQSLOD=2.8686;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:21:20.94:164,21,0	1/1:3,0:3:8.58:61,9,0	0/0:27,0:8:6.03:0,6,106	0/1:29,0:7:15.11:15,0,44	1/1:8,0:7:11.98:97,12,0	1/1:20,0:19:14.99:126,15,0	1/1:16,3:17:21.58:211,22,0	1/1:10,0:10:29.80:223,30,0	0/1:9,0:8:10.57:43,0,11	1/1:12,0:12:23.03:145,23,0	0/1:21,0:20:2.12:2,0,15	1/1:7,1:10:17.96:151,18,0	1/1:7,2:9:14.92:128,15,0	0/1:14,0:13:2.53:42,0,3	0/1:18,0:16:12.22:57,0,12	1/1:12,0:12:10.18:86,10,0	1/1:9,0:9:11.94:97,12,0	1/1:17,0:15:38.54:284,39,0	0/1:10,0:8:5.26:35,0,5	1/1:12,0:11:3.53:26,4,0	./.	1/1:10,1:10:3:25,3,0	1/1:9,2:10:11.98:112,12,0	1/1:27,1:27:47.69:412,48,0	0/1:19,0:17:8.54:51,0,9	1/1:12,0:12:11.02:74,11,0	0/1:21,0:20:0.02:59,0,0	./.
chr10	59431138	.	AGAGT	A	4355.36	PASS	AB=0.899;AC=46;AF=0.885;AN=52;BaseQRankSum=-4.298;DP=381;FS=0.000;HRun=0;HaplotypeScore=111.6294;InbreedingCoeff=0.0913;MQ=49.63;MQ0=21;MQRankSum=-1.075;QD=13.44;ReadPosRankSum=1.665;VQSLOD=4.3924;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:17:13.31:147,13,0	1/1:3,0:3:8.99:74,9,0	0/0:31,0:8:7.60:0,8,356	0/1:37,0:7:25.50:25,0,56	1/1:7,0:6:11.76:95,12,0	1/1:16,0:16:15.20:110,15,0	1/1:17,0:15:0.44:180,0,0	1/1:10,0:10:29.74:220,30,0	0/1:12,0:11:59.92:60,0,75	1/1:8,1:9:20.94:371,21,0	0/1:14,4:17:13.05:78,0,13	1/1:8,0:8:14.93:118,15,0	1/1:6,0:6:11.86:87,12,0	1/1:10,2:12:21.93:257,22,0	1/1:11,4:13:1.10:174,1,0	1/1:6,3:9:20.72:292,21,0	1/1:9,0:9:12.41:96,12,0	1/1:16,0:15:21.28:293,21,0	1/1:7,1:6:14.84:220,15,0	1/1:8,1:9:15.17:166,15,0	./.	1/1:7,0:6:5.99:50,6,0	1/1:9,0:9:14.82:114,15,0	1/1:26,0:26:33.58:324,34,0	1/1:15,2:16:21.68:303,22,0	0/1:5,2:7:13.43:301,0,13	1/1:6,14:19:5.66:199,6,0	./.
chr10	59431140	.	AGT	A	1839.18	PASS	AB=1.000;AC=32;AF=0.615;AN=52;BaseQRankSum=0.300;DP=376;FS=4.012;HRun=0;HaplotypeScore=109.9741;InbreedingCoeff=0.3293;MQ=50.10;MQ0=20;MQRankSum=-1.240;QD=8.32;ReadPosRankSum=4.770;VQSLOD=3.2981;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:17:2.82:9,3,0	1/1:3,0:3:5.48:19,5,0	0/0:32,0:8:3.77:0,4,259	0/0:38,0:7:16.57:0,17,134	0/0:7,0:6:0.43:0,0,2	0/0:15,0:15:0.79:0,1,21	0/1:17,0:15:33.32:46,0,33	0/0:10,0:10:1.77:0,2,4	0/0:11,0:11:17.45:0,17,150	1/1:6,2:8:21.05:251,21,0	1/1:13,3:16:14.31:91,14,0	0/1:9,0:9:16.10:16,0,17	1/1:6,0:6:6.06:27,6,0	1/1:12,0:12:25.95:198,26,0	1/1:12,2:12:16.87:181,17,0	1/1:7,2:9:20.72:211,21,0	0/1:10,0:10:3.76:4,0,35	0/0:17,0:15:4.23:0,4,42	1/1:6,1:6:16.42:144,16,0	1/1:7,1:8:14.71:128,15,0	./.	1/1:5,0:4:0.24:0,0,0	0/1:8,0:8:16.11:16,0,20	0/1:27,0:27:12.33:28,0,12	1/1:15,2:16:30.25:256,30,0	0/1:8,0:8:1.96:198,0,2	1/1:19,1:19:17.15:173,17,0	./.
chr10	59431790	.	TA	T	3750.69	PASS	AB=0.885;AC=27;AF=0.482;AN=56;BaseQRankSum=11.794;DP=424;FS=10.209;HRun=10;HaplotypeScore=43.0680;InbreedingCoeff=0.8231;MQ=70.53;MQ0=0;MQRankSum=-1.972;QD=17.95;ReadPosRankSum=1.770;VQSLOD=3.7366;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:51.14:0,51,564	0/1:6,1:7:4.71:5,0,178	0/0:7,0:7:17.92:0,18,181	0/1:6,1:7:14.29:14,0,74	0/0:29,1:30:49.12:0,49,753	0/0:24,0:24:69.17:0,69,754	0/0:9,0:9:27.07:0,27,299	0/0:33,0:33:72.19:0,72,796	0/0:11,0:11:33.06:0,33,354	1/1:0,10:10:29.87:249,30,0	1/1:4,10:14:26.98:234,27,0	0/0:13,1:14:16.04:0,16,396	0/0:12,0:12:33.07:0,33,356	1/1:0,7:7:21:182,21,0	1/1:0,10:10:29.99:260,30,0	1/1:1,10:11:26.98:234,27,0	0/0:23,0:23:60.16:0,60,664	0/1:17,2:19:0.73:1,0,447	1/1:7,14:21:11.70:312,12,0	1/1:2,16:18:41.97:365,42,0	1/1:1,4:5:11.99:104,12,0	0/0:5,0:5:15.04:0,15,166	0/0:14,0:14:36.10:0,36,398	0/0:15,0:15:42.11:0,42,465	1/1:1,17:18:47.99:417,48,0	1/1:2,21:23:32.80:513,33,0	1/1:1,25:26:68.99:599,69,0	1/1:3,10:13:29.99:260,30,0
chr10	59431967	.	CT	C	5188.94	PASS	AB=0.795;AC=44;AF=0.786;AN=56;BaseQRankSum=-7.383;DP=490;FS=1.019;HRun=13;HaplotypeScore=60.7028;InbreedingCoeff=0.7408;MQ=76.44;MQ0=0;MQRankSum=-0.897;QD=13.20;ReadPosRankSum=2.843;VQSLOD=5.2918;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:21:29.95:0,30,395	1/1:1,4:5:5.90:41,6,0	0/0:13,0:10:11.91:0,12,92	0/1:17,0:16:14.67:15,0,24	0/0:20,2:24:14.13:0,14,405	1/1:6,16:24:17.98:250,18,0	1/1:7,16:24:43.73:312,44,0	1/1:7,8:17:24.85:162,25,0	0/0:22,0:22:51.06:0,51,486	1/1:1,11:12:26.67:189,27,0	1/1:2,11:13:29.81:219,30,0	1/1:5,14:19:29.80:219,30,0	1/1:2,11:14:28.87:203,29,0	1/1:7,13:20:31.80:222,32,0	1/1:6,23:30:39.18:443,39,0	1/1:3,12:15:32.81:241,33,0	1/1:4,20:26:57.75:406,58,0	0/0:15,0:17:44.81:0,45,405	1/1:4,10:16:34.55:226,35,0	1/1:5,9:15:25.81:177,26,0	1/1:3,13:16:35.79:263,36,0	0/1:4,9:13:24.31:139,0,24	1/1:2,12:16:39.85:274,40,0	1/1:0,18:19:40.82:290,41,0	1/1:1,11:13:31.86:225,32,0	1/1:4,17:21:28.09:345,28,0	1/1:1,14:15:38.77:285,39,0	1/1:5,8:13:5.94:44,6,0
chr10	59434131	.	TA	T	11828.77	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=9.797;DP=685;FS=1.876;HRun=9;HaplotypeScore=69.9064;InbreedingCoeff=0.9989;MQ=77.20;MQ0=0;MQRankSum=-2.234;QD=23.94;ReadPosRankSum=2.907;VQSLOD=5.7799;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,38:41:99:933,102,0	1/1:1,11:13:32.05:281,32,0	0/0:24,0:23:34.59:0,35,436	0/0:13,1:13:18.96:0,19,213	1/1:7,28:35:81.02:741,81,0	0/0:20,0:20:57.16:0,57,650	0/0:23,0:23:63.12:0,63,700	1/1:5,22:27:66:594,66,0	1/1:1,24:25:71.96:648,72,0	1/1:3,34:37:99:934,102,0	1/1:2,29:31:83.92:750,84,0	0/0:16,0:16:45.13:0,45,519	0/0:26,0:26:72.17:0,72,816	1/1:1,17:18:51.03:467,51,0	1/1:1,24:25:69.04:632,69,0	1/1:1,24:25:72.04:659,72,0	1/1:3,16:19:45.02:412,45,0	1/1:0,20:20:57.03:522,57,0	1/1:6,27:33:75.02:686,75,0	1/1:1,25:26:66.02:604,66,0	1/1:4,21:25:63.03:577,63,0	0/0:24,0:24:72.20:0,72,820	0/0:25,1:26:70.01:0,70,763	0/0:18,0:18:54.16:0,54,623	1/1:1,14:15:42.02:384,42,0	1/1:1,34:35:99:933,102,0	1/1:2,25:27:50.48:634,50,0	1/1:1,16:17:48.03:439,48,0
chr10	59437239	.	AG	A	2787.80	PASS	AB=0.533;AC=5;AF=0.089;AN=56;BaseQRankSum=5.373;DP=1086;FS=0.891;HRun=2;HaplotypeScore=134.3895;InbreedingCoeff=0.7813;MQ=59.65;MQ0=34;MQRankSum=1.121;QD=30.98;ReadPosRankSum=-1.206;VQSLOD=2.9679;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:53:99:0,144,2094	0/1:1,7:8:14.67:213,0,15	0/0:37,0:13:25.30:0,25,295	0/0:36,1:16:14.16:0,14,337	0/0:25,0:25:63.20:0,63,911	0/0:29,0:29:78.25:0,78,1145	0/0:43,0:43:99:0,123,1775	1/1:2,36:34:58.82:1225,59,0	0/0:41,0:41:99:0,120,1795	0/0:58,0:56:99:0,169,2493	0/0:18,0:18:51.17:0,51,760	0/0:60,0:61:99:0,176,2658	0/0:43,0:42:99:0,126,1876	0/0:45,0:45:99:0,126,1812	0/0:37,0:37:99:0,107,1547	0/0:43,0:43:99:0,126,1838	1/1:2,42:44:99:1480,114,0	0/0:36,0:36:93.31:0,93,1385	0/0:30,0:25:63.21:0,63,931	0/0:19,0:19:54.16:0,54,765	0/0:113,0:111:99:0,304,4486	0/0:39,0:39:99:0,111,1652	0/0:16,0:16:36.12:0,36,538	0/0:62,0:62:99:0,183,2623	0/0:32,0:32:87.29:0,87,1298	0/0:48,0:47:99:0,129,1881	0/0:10,0:10:27.08:0,27,376	0/0:20,0:20:54.16:0,54,755
chr10	59437447	.	GCACACACATACACACACACAGGCA	G	7604.67	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=6.953;DP=941;FS=5.574;HRun=0;HaplotypeScore=516.5457;InbreedingCoeff=0.8732;MQ=54.26;MQ0=15;MQRankSum=-0.850;QD=21.18;ReadPosRankSum=0.030;VQSLOD=0.9585;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:40:84.24:0,84,3691	0/0:20,0:19:32.47:0,32,1429	0/0:36,0:4:9.49:0,9,220	0/0:35,0:13:16.76:0,17,231	0/0:21,0:21:51.57:0,52,2591	0/0:29,0:29:66.18:0,66,3428	0/0:50,0:49:99:0,122,3670	0/0:38,0:35:21.13:0,21,1315	0/0:35,0:34:25.91:0,26,3941	1/1:9,48:53:21.50:1348,21,0	0/0:3,0:3:0:0,0,0	0/0:50,0:50:99:0,120,5623	0/0:35,0:35:87.18:0,87,4003	1/1:28,0:28:41.55:750,42,0	1/1:32,0:32:41.22:397,41,0	0/1:23,0:23:99:444,0,104	0/0:41,0:41:82.50:0,83,2895	0/0:38,0:39:95.51:0,96,3170	1/1:16,14:22:41.90:579,42,0	1/1:6,12:17:6.32:35,6,0	1/1:93,0:89:99:1660,99,0	0/0:27,0:27:63.19:0,63,2987	0/0:17,0:17:45.07:0,45,2128	0/0:64,0:64:99:0,138,5122	1/1:15,0:14:26.71:376,27,0	1/1:12,28:38:52.83:896,53,0	1/1:8,0:8:17.97:302,18,0	1/1:14,0:14:38.97:818,39,0
chr10	59437454	.	CAT	C	222.54	PASS	AB=0.854;AC=9;AF=0.161;AN=56;BaseQRankSum=8.961;DP=930;FS=1.382;HRun=0;HaplotypeScore=210.8019;InbreedingCoeff=-0.0771;MQ=53.14;MQ0=19;MQRankSum=-6.283;QD=1.21;ReadPosRankSum=-5.717;VQSLOD=1.0644;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:40:89.40:0,89,1501	0/0:20,0:19:42.10:0,42,691	0/0:41,0:5:10.48:0,10,108	0/0:37,0:11:26.26:0,26,364	0/0:24,0:23:27.08:0,27,1007	0/0:28,0:28:75.04:0,75,1272	0/0:54,0:53:99:0,130,2347	0/0:41,0:38:92.48:0,92,1584	0/0:35,0:34:99:0,99,1811	0/0:56,1:53:37.52:0,38,1147	0/1:2,1:3:0:0,0,0	0/0:46,0:46:99:0,132,2392	0/0:36,0:36:99:0,108,1768	0/1:21,8:29:13.97:14,0,650	0/1:25,5:30:2.41:2,0,733	0/1:20,3:23:36.06:36,0,633	0/0:41,0:41:81.28:0,81,1556	0/0:37,0:37:73.34:0,73,1656	0/1:25,0:17:10.80:11,0,397	0/0:17,0:16:10.56:0,11,109	0/0:86,2:83:99:0,124,2221	0/0:28,0:28:71.68:0,72,1273	0/0:18,0:18:43.12:0,43,879	0/0:57,0:57:99:0,153,2700	0/1:12,4:15:1.37:1,0,383	0/1:34,0:32:27.91:28,0,579	0/1:5,1:6:17.37:17,0,258	0/1:12,6:18:99:235,0,288
chr10	59437469	.	GCA	G	2361.24	PASS	AB=0.804;AC=14;AF=0.250;AN=56;BaseQRankSum=10.467;DP=937;FS=1.972;HRun=0;HaplotypeScore=212.4362;InbreedingCoeff=-0.0313;MQ=53.46;MQ0=18;MQRankSum=-1.457;QD=6.86;ReadPosRankSum=-8.663;VQSLOD=1.2713;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,99,1691	0/0:16,0:15:27.07:0,27,433	0/0:38,1:8:12.93:0,13,213	0/0:43,0:15:37.01:0,37,513	0/0:27,0:26:66.05:0,66,1105	0/0:28,0:28:75.22:0,75,1286	0/0:59,1:59:84.10:0,84,1983	0/0:38,0:36:90.07:0,90,1403	0/0:36,0:35:93.29:0,93,1517	0/1:54,0:51:99:509,0,231	1/1:2,4:6:2.93:39,3,0	0/0:50,0:50:99:0,135,2225	0/0:30,0:30:84.26:0,84,1383	0/1:16,16:32:82.91:83,0,245	0/1:14,12:26:96.49:96,0,97	0/1:15,14:29:99:271,0,168	0/0:43,0:43:92.95:0,93,1502	0/0:35,0:35:77.81:0,78,1224	0/1:22,0:14:7.36:229,0,7	1/1:12,1:13:2.89:16,3,0	0/1:69,19:83:99:445,0,512	0/0:28,0:28:69.20:0,69,1170	0/0:18,0:18:42.14:0,42,696	0/0:60,1:61:99:0,147,2444	0/1:11,8:18:74.75:75,0,82	0/1:30,0:28:93.21:313,0,93	0/1:5,1:6:58.90:67,0,59	0/1:8,11:19:99:373,0,104
chr10	59437516	.	TAC	T	1815.23	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=7.185;DP=916;FS=5.525;HRun=0;HaplotypeScore=168.3739;InbreedingCoeff=0.8847;MQ=53.04;MQ0=14;MQRankSum=1.664;QD=20.40;ReadPosRankSum=-1.291;VQSLOD=3.3877;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,114,1836	1/1:3,11:15:27.09:341,27,0	0/0:38,0:7:8.13:0,8,65	0/0:43,1:7:15.03:0,15,172	0/0:30,0:30:56.43:0,56,1237	0/0:24,0:24:51.16:0,51,830	0/0:42,0:42:96.36:0,96,1527	1/1:10,25:35:1.42:728,1,0	0/0:27,0:27:57.16:0,57,921	0/0:46,0:46:97.56:0,98,1600	0/0:18,0:18:38.84:0,39,613	0/0:42,1:43:69.73:0,70,1629	0/0:30,0:30:78.27:0,78,1286	0/0:33,0:33:50.95:0,51,782	0/0:23,0:23:24.50:0,24,457	0/0:29,0:29:60.15:0,60,961	1/1:7,32:39:61.29:877,61,0	0/0:23,0:22:54.15:0,54,863	0/0:18,0:16:44.62:0,45,624	0/0:21,0:18:24.08:0,24,381	0/0:95,0:92:99:0,174,2812	0/0:30,0:30:77.94:0,78,1254	0/0:19,0:19:48.16:0,48,789	0/0:48,3:51:31.29:0,31,2139	0/0:19,0:18:27.09:0,27,426	0/0:45,0:45:99:0,99,1559	0/0:12,0:12:33.09:0,33,499	0/0:21,0:21:51.17:0,51,824
chr10	59439020	.	G	GTGTCTGTC	774.47	PASS	AB=1.000;AC=17;AF=0.327;AN=52;BaseQRankSum=8.125;DP=744;FS=17.224;HRun=0;HaplotypeScore=185.1601;InbreedingCoeff=0.0542;MQ=63.02;MQ0=20;MQRankSum=-6.477;QD=2.44;ReadPosRankSum=-3.052;VQSLOD=1.2653;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:21,23:41:0.47:1,0,0	0/0:14,0:14:0.78:0,1,38	0/0:32,0:16:5.99:0,6,68	0/0:56,0:25:8.79:0,9,117	./.	0/0:27,0:27:54.17:0,54,1220	0/0:32,0:32:38.38:0,38,796	0/1:40,0:38:50.43:50,0,185	1/1:17,4:22:14.98:183,15,0	0/1:24,0:24:58.17:206,0,58	1/1:11,0:11:2.22:7,2,0	0/0:25,0:25:45.10:0,45,1012	0/0:18,0:18:24.05:0,24,447	0/1:21,0:21:0:0,0,0	0/0:34,0:33:4.85:0,5,73	0/1:34,0:34:20.52:21,0,259	0/0:24,0:24:0.49:0,0,20	1/1:7,1:9:6.02:96,6,0	0/1:19,0:16:45.84:106,0,46	0/0:20,0:20:11.32:0,11,156	0/1:44,0:44:18.18:18,0,105	0/0:25,0:25:48.13:0,48,1002	0/0:33,0:33:54.19:0,54,1334	0/0:48,0:47:89.93:0,90,1936	./.	0/1:20,0:20:91.92:139,0,92	0/1:25,0:23:61.17:61,0,78	0/1:5,0:5:32.31:32,0,40
chr10	59439042	.	G	GTCTCTC	4528.85	PASS	AB=1.000;AC=25;AF=0.481;AN=52;BaseQRankSum=4.545;DP=731;FS=2.684;HRun=0;HaplotypeScore=147.8845;InbreedingCoeff=0.7332;MQ=49.36;MQ0=32;MQRankSum=-5.620;QD=13.85;ReadPosRankSum=-2.871;VQSLOD=3.9410;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:37,0:34:0.47:1,0,0	1/1:14,0:16:18.53:255,19,0	0/0:20,0:3:9.03:0,9,170	0/0:40,0:7:18.03:0,18,280	./.	0/0:36,0:35:78.67:0,79,1562	0/0:31,0:31:53.31:0,53,975	0/1:41,0:39:17.05:243,0,17	0/0:21,0:21:13.72:0,14,152	1/1:4,23:29:62.09:1226,62,0	1/1:3,10:15:4.40:45,4,0	0/0:26,0:26:71.74:0,72,1508	0/0:17,0:17:39.01:0,39,725	0/0:1,19:23:0.16:0,0,1	0/0:6,23:32:1.31:0,1,4	1/1:24,5:29:47.39:713,47,0	1/1:3,0:21:6.49:109,6,0	0/0:12,0:12:7.99:0,8,105	1/1:10,11:18:32.34:603,32,0	1/1:7,13:22:3.44:26,3,0	1/1:22,18:41:5.69:46,6,0	0/0:30,0:29:66.14:0,66,1276	0/0:31,0:31:69.22:0,69,1483	0/0:49,0:48:99:0,124,2566	./.	1/1:4,15:21:42.88:790,43,0	1/1:5,14:23:11.81:264,12,0	1/1:2,4:5:9.03:208,9,0
chr10	59439074	.	T	TACACACACAC	1060.66	PASS	AB=1.000;AC=14;AF=0.250;AN=56;BaseQRankSum=-1.315;DP=756;FS=2.830;HRun=0;HaplotypeScore=216.9460;InbreedingCoeff=0.6656;MQ=50.25;MQ0=27;MQRankSum=-5.055;QD=4.84;ReadPosRankSum=-5.137;VQSLOD=1.3049;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:36,2:37:13.42:195,13,0	1/1:8,0:12:2.97:52,3,0	0/1:26,0:7:5.50:5,0,39	0/0:23,0:6:5.61:0,6,55	0/0:7,20:29:0.94:0,1,2	0/0:14,0:34:33.20:0,33,463	0/0:16,0:40:24.45:0,24,252	1/1:48,0:47:62.96:525,63,0	1/1:7,16:26:3.01:132,3,0	0/0:32,0:31:42.61:0,43,880	0/0:13,0:13:15.92:0,16,315	0/0:10,0:28:45.07:0,45,494	0/0:3,0:18:30.04:0,30,290	0/0:19,0:20:24.46:0,24,474	0/0:31,0:31:21.38:0,21,531	0/1:24,0:28:7.99:8,0,534	1/1:23,0:24:16.57:202,17,0	1/1:2,8:15:5.95:109,6,0	0/0:13,0:11:17.24:0,17,313	0/0:25,0:24:27.01:0,27,499	0/0:30,0:28:42.11:0,42,804	0/0:12,0:32:33.07:0,33,365	0/0:12,0:32:22.40:0,22,209	0/0:16,0:54:75.45:0,75,711	0/0:25,0:26:36.03:0,36,626	0/0:25,0:25:45.03:0,45,1057	0/0:19,0:20:15.44:0,15,244	0/0:7,0:6:3.01:0,3,91
chr10	59439597	.	CCACA	C	4677.83	PASS	AB=0.671;AC=36;AF=0.692;AN=52;BaseQRankSum=-4.284;DP=541;FS=2.193;HRun=0;HaplotypeScore=98.7629;InbreedingCoeff=0.6684;MQ=49.22;MQ0=48;MQRankSum=1.828;QD=13.92;ReadPosRankSum=3.392;VQSLOD=4.3463;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:20:11.23:91,11,0	1/1:3,2:6:9.02:104,9,0	./.	./.	0/1:6,0:15:0:1,0,0	0/0:8,0:20:12.73:0,13,143	0/0:13,0:18:16.57:0,17,247	1/1:22,10:29:21.02:268,21,0	1/1:7,0:9:6.01:56,6,0	1/1:8,5:12:18.06:286,18,0	1/1:5,7:14:9.40:256,9,0	0/0:6,0:12:14.55:0,15,216	0/0:5,0:7:9.33:0,9,119	1/1:4,5:9:6.02:96,6,0	1/1:6,10:15:18.17:419,18,0	1/1:7,8:18:27.08:391,27,0	0/1:17,11:26:31.47:353,0,31	1/1:13,0:21:11.51:77,12,0	1/1:8,6:10:13.76:276,14,0	1/1:8,5:14:17.98:232,18,0	1/1:25,7:30:9.03:144,9,0	0/0:5,0:4:0:0,0,0	0/0:5,0:9:2.94:0,3,18	0/0:15,0:22:3.47:0,3,26	1/1:7,8:17:15.05:239,15,0	1/1:12,7:20:37.36:548,37,0	1/1:5,10:14:24.07:361,24,0	1/1:9,10:16:29.83:479,30,0
chr10	59440256	.	A	AGT	1262.84	PASS	AB=0.863;AC=18;AF=0.333;AN=54;BaseQRankSum=2.703;DP=415;FS=1.880;HRun=0;HaplotypeScore=71.5488;InbreedingCoeff=0.5969;MQ=66.74;MQ0=0;MQRankSum=-1.246;QD=7.18;ReadPosRankSum=1.260;VQSLOD=3.2165;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:27:0,27,269	1/1:6,0:6:15.95:86,16,0	0/0:14,0:13:19.67:0,20,152	0/0:13,0:14:30.83:0,31,232	0/0:9,0:9:6.01:0,6,65	1/1:8,6:15:8.86:111,9,0	1/1:8,13:21:17.95:261,18,0	1/1:27,0:27:53.69:297,54,0	0/0:13,0:13:17.99:0,18,170	0/0:9,0:9:6:0,6,54	0/0:7,0:7:5.92:0,6,39	1/1:10,1:11:5.85:61,6,0	0/1:11,1:12:27.94:78,0,28	0/0:16,0:16:5.13:0,5,61	0/0:19,0:19:24.05:0,24,264	0/0:11,0:11:15.02:0,15,148	1/1:38,0:38:86.14:369,86,0	0/0:19,0:19:29.21:0,29,253	0/0:16,0:16:18:0,18,158	0/1:11,0:11:1.99:2,0,82	0/0:23,0:23:32.91:0,33,288	0/1:2,3:5:0:0,0,0	1/1:9,2:11:5.78:66,6,0	0/1:17,1:19:10.86:109,0,11	0/0:6,0:6:2.97:0,3,27	0/0:10,0:10:6:0,6,54	0/0:19,0:18:17.97:0,18,160	./.
chr10	59440264	.	TG	T	1111.89	PASS	AB=0.952;AC=14;AF=0.250;AN=56;BaseQRankSum=0.529;DP=406;FS=22.152;HRun=12;HaplotypeScore=68.8189;InbreedingCoeff=0.1330;MQ=68.28;MQ0=3;MQRankSum=-0.525;QD=5.50;ReadPosRankSum=4.363;VQSLOD=0.4508;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:24,1:25:29.72:30,0,76	1/1:2,5:7:11.92:93,12,0	0/0:18,0:14:23.93:0,24,208	0/0:16,0:14:32.02:0,32,279	0/0:8,0:8:5.99:0,6,54	0/0:14,0:14:5.85:0,6,33	0/0:22,1:23:5.69:0,6,128	1/1:13,15:29:52.11:359,52,0	0/1:13,1:14:17.22:17,0,25	0/0:7,0:7:3:0,3,25	0/0:3,0:3:0:0,0,0	0/0:11,0:11:5.58:0,6,27	0/1:12,1:13:8.86:9,0,51	0/0:9,0:12:3.48:0,3,32	0/0:16,2:18:2.03:0,2,176	0/1:8,1:9:14.22:14,0,46	1/1:8,29:36:91.63:702,92,0	0/1:22,2:24:16.48:16,0,178	0/1:8,0:8:12.77:13,0,51	0/0:8,0:8:2.98:0,3,22	0/1:29,1:30:7.08:7,0,157	0/1:5,0:5:0.03:0,0,0	0/0:7,0:7:5.52:0,6,26	0/0:23,0:23:26.17:0,26,186	0/0:5,0:5:2.92:0,3,19	0/0:3,0:3:0:0,0,0	0/0:21,2:22:11.82:0,12,102	0/0:5,0:5:2.99:0,3,24
chr10	59440265	.	G	GT	1358.29	PASS	AB=0.904;AC=17;AF=0.304;AN=56;BaseQRankSum=1.192;DP=391;FS=7.961;HRun=1;HaplotypeScore=82.7016;InbreedingCoeff=0.5055;MQ=70.36;MQ0=3;MQRankSum=-2.822;QD=8.28;ReadPosRankSum=5.979;VQSLOD=0.7257;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:35.73:0,36,304	1/1:7,0:7:17.47:110,17,0	0/0:18,0:14:29.59:0,30,240	0/0:16,0:14:36.95:0,37,322	0/0:9,0:9:5.96:0,6,67	1/1:10,0:10:8.68:50,9,0	0/1:23,1:24:28.46:126,0,28	1/1:28,0:28:62.06:409,62,0	0/0:14,0:14:17.89:0,18,159	0/0:7,0:7:9:0,9,79	0/0:3,0:3:5.92:0,6,39	1/1:4,4:8:5.97:65,6,0	0/1:6,2:8:14.86:75,0,15	0/0:11,0:11:5.60:0,6,65	0/0:18,0:18:29.94:0,30,311	0/0:9,0:9:17.91:0,18,162	1/1:39,2:39:99:556,100,0	0/0:22,0:22:41.17:0,41,348	0/0:8,0:8:20.94:0,21,193	0/1:8,0:8:1.98:2,0,82	0/0:31,0:31:44.75:0,45,373	0/1:3,0:3:0.01:0,0,0	1/1:3,2:5:5.93:58,6,0	0/1:15,7:22:81.91:82,0,102	0/0:5,0:5:5.90:0,6,46	0/0:5,0:5:6:0,6,54	0/0:19,0:18:26.62:0,27,233	0/0:6,0:6:2.99:0,3,24
chr10	59440601	.	G	GA	1323.02	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=-5.269;DP=549;FS=0.556;HRun=9;HaplotypeScore=61.2617;InbreedingCoeff=0.8489;MQ=69.51;MQ0=11;MQRankSum=1.237;QD=18.12;ReadPosRankSum=-0.577;VQSLOD=3.4643;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:68.83:0,69,594	1/1:4,3:7:17.98:175,18,0	0/0:39,0:18:25.77:0,26,233	0/0:43,0:16:2.41:0,2,80	0/0:22,0:21:53.97:0,54,466	0/0:15,0:15:32.98:0,33,286	0/0:14,0:14:35.98:0,36,312	1/1:4,23:27:71.22:762,71,0	0/0:14,0:14:38.97:0,39,332	0/0:17,0:16:47.95:0,48,408	0/0:17,0:17:38.94:0,39,330	0/0:23,0:22:59.98:0,60,521	0/0:9,0:7:20.99:0,21,181	0/0:10,0:10:23.99:0,24,208	0/0:16,0:16:38.91:0,39,327	0/0:15,0:13:32.99:0,33,286	1/1:2,23:25:48.13:527,48,0	0/1:14,0:13:0.12:0,0,226	0/0:22,0:21:56.69:0,57,484	0/0:26,0:26:62.94:0,63,540	0/0:20,0:20:41.96:0,42,364	0/0:15,0:15:41.98:0,42,364	0/0:15,0:13:32.99:0,33,286	0/0:9,0:9:20.99:0,21,182	0/0:13,0:13:32.99:0,33,286	0/0:26,0:26:56.90:0,57,483	0/0:31,0:30:71.94:0,72,619	0/0:18,0:18:53.99:0,54,468
chr10	59441039	.	G	GT	2740.43	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-10.974;DP=602;FS=1.381;HRun=9;HaplotypeScore=56.8191;InbreedingCoeff=0.9953;MQ=72.94;MQ0=0;MQRankSum=-0.428;QD=26.35;ReadPosRankSum=1.586;VQSLOD=4.2285;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,37:44:99:1210,112,0	0/0:10,0:10:26.99:0,27,234	0/0:12,0:12:23.96:0,24,204	0/0:10,0:10:20.98:0,21,178	1/1:5,25:30:75.16:816,75,0	0/0:29,0:29:83.98:0,84,729	0/0:21,0:21:44.93:0,45,384	0/0:34,0:34:83.32:0,83,716	1/1:0,14:14:42.11:465,42,0	0/0:30,0:30:77.97:0,78,674	0/0:20,0:20:56.98:0,57,493	0/0:12,0:12:32.99:0,33,286	0/0:16,0:16:41.96:0,42,360	0/0:19,0:19:56.96:0,57,485	0/0:24,0:24:56.98:0,57,495	0/0:14,0:14:41.98:0,42,361	0/0:34,0:34:89.96:0,90,781	1/1:1,15:16:20.27:410,20,0	0/0:20,0:20:47.98:0,48,417	0/0:23,0:24:62.02:0,62,526	0/0:10,0:10:20.99:0,21,182	0/0:16,0:17:47:0,47,391	0/0:25,0:25:65.97:0,66,569	0/0:17,0:17:50.99:0,51,443	0/0:21,0:21:56.93:0,57,487	0/0:33,0:33:86.96:0,87,753	0/0:34,0:34:99:0,102,875	0/0:12,0:12:32.99:0,33,287
chr10	59443821	.	AGT	A	9170.62	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-2.273;DP=570;FS=7.504;HRun=0;HaplotypeScore=108.9619;InbreedingCoeff=0.7429;MQ=58.49;MQ0=10;MQRankSum=-1.232;QD=17.43;ReadPosRankSum=2.191;VQSLOD=4.6622;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:9,40:49:48.15:579,48,0	1/1:4,4:8:18.04:191,18,0	0/0:21,0:4:3.01:0,3,44	0/0:23,0:10:9.91:0,10,64	1/1:9,15:24:15.05:181,15,0	1/1:4,16:20:24.07:283,24,0	1/1:10,6:16:12.03:137,12,0	1/1:23,4:27:53.74:599,54,0	1/1:2,14:17:18.05:215,18,0	1/1:18,3:21:48.13:559,48,0	1/1:5,20:25:20.73:248,21,0	1/1:4,9:13:12.51:141,13,0	1/1:8,7:16:38.91:440,39,0	1/1:3,14:17:27.08:320,27,0	1/1:13,6:19:39.11:454,39,0	1/1:2,13:15:21.06:251,21,0	1/1:16,7:23:39.08:436,39,0	1/1:3,10:13:3.01:36,3,0	1/1:13,4:16:21.05:251,21,0	1/1:10,10:20:36.09:410,36,0	1/1:25,2:27:39.12:465,39,0	1/1:7,6:13:18.04:196,18,0	1/1:9,13:22:42.13:492,42,0	1/1:12,7:19:33.08:382,33,0	1/1:15,7:21:41.99:497,42,0	1/1:11,7:18:23.12:389,23,0	1/1:6,11:17:42.12:487,42,0	1/1:22,6:28:45.13:533,45,0
chr10	59443842	.	ATG	A	6536.86	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=4.730;DP=640;FS=9.063;HRun=0;HaplotypeScore=138.6667;InbreedingCoeff=0.8883;MQ=52.39;MQ0=20;MQRankSum=-1.747;QD=13.82;ReadPosRankSum=1.209;VQSLOD=3.9506;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:26.27:0,26,349	1/1:4,4:8:21.06:235,21,0	0/0:29,0:4:5.95:0,6,60	0/0:31,0:6:3.37:0,3,9	0/0:25,0:24:28.80:0,29,304	1/1:11,7:19:38.90:429,39,0	1/1:2,12:14:9.02:95,9,0	1/1:27,13:36:32.08:399,32,0	0/0:20,1:22:18.26:0,18,268	1/1:12,12:24:36.10:408,36,0	1/1:18,9:28:35.45:393,35,0	1/1:11,3:14:12.04:138,12,0	1/1:13,8:21:29.43:303,29,0	1/1:9,7:16:32.57:344,33,0	1/1:9,17:26:18.03:196,18,0	1/1:8,7:15:27.08:314,27,0	1/1:20,9:29:46.61:495,47,0	0/0:11,0:11:8.84:0,9,78	1/1:17,5:19:27.59:310,28,0	1/1:5,18:24:23.84:242,24,0	1/1:18,13:32:12.01:126,12,0	1/1:3,8:12:8.81:81,9,0	1/1:5,19:24:32.94:366,33,0	1/1:4,13:17:21.06:243,21,0	1/1:9,13:21:23.92:263,24,0	1/1:5,17:24:56.75:595,57,0	1/1:5,17:23:29.63:321,30,0	1/1:8,11:19:21.06:240,21,0
chr10	59443844	.	G	GTA	454.34	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=-1.837;DP=638;FS=33.066;HRun=0;HaplotypeScore=160.4967;InbreedingCoeff=0.0038;MQ=53.17;MQ0=20;MQRankSum=3.482;QD=1.65;ReadPosRankSum=-3.663;VQSLOD=0.2493;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:56.77:0,57,956	0/1:9,0:9:16.40:17,0,16	0/0:28,0:5:9.39:0,9,103	0/0:32,0:7:14.04:0,14,96	0/0:25,0:24:39.05:0,39,539	0/1:19,0:19:1.13:62,0,1	0/1:15,0:15:21.81:22,0,35	0/1:41,0:37:99:124,0,350	0/0:22,0:22:32.82:0,33,467	0/1:23,0:23:82.07:82,0,224	1/1:27,0:27:6.26:82,6,0	0/1:14,0:14:2.63:3,0,34	0/0:14,7:21:17.68:0,18,126	0/1:16,0:16:2.94:3,0,17	0/0:25,0:25:17.09:0,17,142	1/1:15,0:15:5.19:22,5,0	0/1:30,0:30:62.18:62,0,104	0/0:11,0:11:8.98:0,9,110	0/1:22,0:19:43.27:43,0,90	0/0:24,0:24:14.81:0,15,101	0/0:31,0:32:24.88:0,25,210	0/0:11,0:11:6.14:0,6,41	0/0:24,0:24:3.29:0,3,85	0/0:18,0:18:6.96:0,7,60	0/0:23,0:21:14.59:0,15,186	0/1:24,0:24:66.24:79,0,66	0/1:21,0:21:3.26:3,0,65	0/0:19,0:19:23.93:0,24,192
chr10	59443878	.	CAT	C	2518.16	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=1.303;DP=594;FS=6.674;HRun=0;HaplotypeScore=139.3161;InbreedingCoeff=0.9857;MQ=65.60;MQ0=3;MQRankSum=-0.783;QD=32.28;ReadPosRankSum=0.527;VQSLOD=5.0861;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:89.03:0,89,1433	1/1:0,14:14:42.14:584,42,0	0/0:28,0:19:36.74:0,37,485	0/0:22,0:10:16.36:0,16,195	0/0:25,0:25:72.22:0,72,1233	0/0:22,0:22:63.22:0,63,1139	0/0:15,0:15:18.06:0,18,326	1/1:4,34:34:86.99:1185,87,0	0/0:23,0:23:54.15:0,54,914	0/0:25,0:25:69.17:0,69,1171	0/0:22,0:22:56.83:0,57,1043	0/0:8,0:8:21.07:0,21,385	0/0:17,0:17:27.09:0,27,493	0/0:14,0:14:42.14:0,42,750	0/0:21,0:21:27.09:0,27,482	0/0:14,0:14:42.13:0,42,734	1/1:2,24:26:63.21:892,63,0	0/0:9,0:9:18.06:0,18,330	0/0:21,0:21:63.22:0,63,1148	0/0:31,0:31:66.23:0,66,1201	0/0:16,0:16:24.08:0,24,427	0/0:10,0:10:21.07:0,21,371	0/0:21,0:21:36.12:0,36,651	0/0:20,0:20:45.15:0,45,823	0/0:22,0:21:57.13:0,57,1005	0/0:22,0:22:66.20:0,66,1133	0/0:32,0:32:75.24:0,75,1311	0/0:19,0:19:42.11:0,42,707
chr10	59447918	.	ATGGTGG	A	297.02	PASS	AB=1.000;AC=9;AF=0.225;AN=40;BaseQRankSum=-0.442;DP=336;FS=0.000;HRun=0;HaplotypeScore=53.7012;InbreedingCoeff=0.3623;MQ=46.97;MQ0=75;MQRankSum=-0.368;QD=4.24;ReadPosRankSum=-1.399;VQSLOD=1.2376;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:13,4:15:8.70:111,9,0	0/0:6,0:6:0:0,0,0	./.	./.	0/0:6,3:8:0:0,0,0	0/0:8,0:6:6:0,6,54	0/0:25,0:20:8.98:0,9,73	./.	1/1:19,1:15:13.85:215,14,0	0/0:7,0:4:2.92:0,3,17	./.	0/0:20,0:13:7.84:0,8,149	0/0:6,0:5:3.01:0,3,78	1/1:9,0:4:2.22:7,2,0	./.	0/0:11,0:9:9.02:0,9,178	0/0:11,0:8:1.25:0,1,3	1/1:13,4:17:3:60,3,0	0/0:16,0:7:2.80:0,3,13	./.	0/0:32,0:35:6.02:0,6,100	./.	0/0:6,0:5:3.01:0,3,78	0/0:18,0:17:6.02:0,6,160	0/0:8,0:7:2.96:0,3,93	0/0:9,0:6:3:0,3,26	0/1:7,0:5:14.80:18,0,15	./.
chr10	59450590	.	AGTTT	A	12767.03	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=5.535;DP=655;FS=3.504;HRun=0;HaplotypeScore=128.5411;InbreedingCoeff=0.8795;MQ=77.55;MQ0=6;MQRankSum=-2.899;QD=21.90;ReadPosRankSum=3.879;VQSLOD=4.8271;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,28:41:68.26:1072,68,0	1/1:2,2:4:6.02:97,6,0	0/0:35,0:30:21.06:0,21,333	0/0:37,0:32:24.06:0,24,413	1/1:5,20:25:56.39:728,56,0	1/1:5,19:24:27.09:436,27,0	1/1:8,17:26:30.10:464,30,0	1/1:15,13:28:38.82:399,39,0	1/1:7,15:22:27.09:436,27,0	1/1:18,14:32:53.71:784,54,0	1/1:7,12:19:10.26:392,10,0	1/1:8,16:24:27.09:436,27,0	1/1:7,12:19:20.89:339,21,0	1/1:3,11:14:15.05:241,15,0	1/1:4,22:26:45.15:696,45,0	1/1:3,13:16:33.11:514,33,0	1/1:2,14:16:27.07:412,27,0	1/1:6,6:12:18.06:291,18,0	1/1:17,3:20:12.03:171,12,0	1/1:15,12:27:32.97:450,33,0	1/1:18,10:28:18.06:271,18,0	1/1:4,24:28:68.59:970,69,0	1/1:4,18:22:35.31:580,35,0	1/1:7,17:24:39.13:630,39,0	1/1:3,15:18:33.11:503,33,0	1/1:12,18:30:50.57:728,51,0	1/1:11,15:26:33.11:532,33,0	1/1:7,5:12:12.04:194,12,0
chr10	59451565	.	G	GA	4239.62	PASS	AB=0.563;AC=19;AF=0.339;AN=56;BaseQRankSum=-4.789;DP=594;FS=2.805;HRun=9;HaplotypeScore=91.6677;InbreedingCoeff=0.8779;MQ=58.97;MQ0=26;MQRankSum=-3.625;QD=21.97;ReadPosRankSum=1.381;VQSLOD=5.4055;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:32:74.97:0,75,648	1/1:3,3:7:11.98:130,12,0	0/0:40,0:17:3.59:0,4,194	0/0:46,0:12:20.08:0,20,128	0/0:38,0:37:99:0,105,903	1/1:5,16:21:47.49:504,47,0	1/1:5,9:13:10.04:337,10,0	1/1:7,19:26:56.94:611,57,0	0/0:17,0:17:32.97:0,33,286	0/0:29,0:28:71.97:0,72,625	0/0:14,0:14:35.99:0,36,312	1/1:1,9:10:27.07:297,27,0	1/1:6,12:16:33.09:365,33,0	0/0:16,0:16:35.99:0,36,312	0/0:18,0:17:35.99:0,36,313	0/0:12,0:11:17.98:0,18,153	1/1:8,34:37:66.53:954,67,0	0/0:22,0:20:29.02:0,29,240	0/0:22,0:22:59.99:0,60,520	0/0:21,0:21:53.97:0,54,465	0/0:7,0:7:11.99:0,12,104	1/1:6,12:16:13.07:371,13,0	1/1:8,11:19:30.04:318,30,0	0/1:4,14:18:10:354,0,10	0/0:22,0:22:20.30:0,20,359	0/0:18,0:17:44.98:0,45,390	0/0:13,0:13:20.99:0,21,182	0/0:10,0:9:15.48:0,15,197
chr10	59451600	.	GAGAA	G	6864.40	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-11.371;DP=565;FS=0.844;HRun=0;HaplotypeScore=146.6742;InbreedingCoeff=0.9671;MQ=63.69;MQ0=3;MQRankSum=5.672;QD=30.24;ReadPosRankSum=2.245;VQSLOD=4.5700;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:42.53:0,43,660	0/0:2,0:8:18.06:0,18,313	0/0:34,0:26:15.78:0,16,153	0/0:25,0:13:2.19:0,2,109	0/0:37,0:36:83.19:0,83,1376	0/0:11,0:14:33.58:0,34,610	0/0:17,0:17:35.92:0,36,446	0/0:22,0:22:21.04:0,21,282	0/0:19,0:19:36.07:0,36,649	1/1:7,20:27:57.14:902,57,0	1/1:3,13:16:29.84:370,30,0	0/0:10,0:13:26.96:0,27,400	0/0:8,0:17:27.09:0,27,481	1/1:3,15:18:30:493,30,0	1/1:0,17:17:42.14:690,42,0	1/1:1,12:13:24.08:395,24,0	0/0:21,0:31:72.04:0,72,1029	0/0:18,0:18:36.03:0,36,582	1/1:12,13:24:39.04:469,39,0	1/1:7,16:23:47.88:635,48,0	1/1:0,12:12:30.10:493,30,0	0/0:16,0:18:47.84:0,48,604	0/0:11,0:20:21:0,21,286	0/0:16,0:19:38.94:0,39,459	1/1:4,19:23:36.12:592,36,0	1/1:4,16:20:48.14:741,48,0	1/1:2,21:23:45.15:739,45,0	1/1:0,10:10:21.07:345,21,0
chr10	59451623	.	A	AAAGG	4947.08	PASS	AB=1.000;AC=18;AF=0.321;AN=56;BaseQRankSum=-0.363;DP=558;FS=1.893;HRun=0;HaplotypeScore=140.8312;InbreedingCoeff=0.3354;MQ=55.79;MQ0=3;MQRankSum=-4.167;QD=18.46;ReadPosRankSum=4.571;VQSLOD=4.3665;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,16:24:18.89:583,19,0	1/1:6,0:6:18.06:292,18,0	0/0:20,0:12:11.58:0,12,77	0/0:14,0:11:15.02:0,15,148	1/1:6,29:34:40.54:1486,41,0	0/1:20,0:20:99:103,0,135	0/1:21,0:21:26.90:27,0,167	0/0:23,0:22:30.01:0,30,405	1/1:3,17:20:27.09:665,27,0	0/0:22,0:22:56.14:0,56,560	0/0:15,0:15:26.90:0,27,260	0/1:16,0:16:99:146,0,136	0/1:16,0:16:67.46:123,0,67	0/0:17,0:17:36.09:0,36,403	0/0:18,0:18:45.13:0,45,521	0/0:15,0:15:33.06:0,33,358	0/1:30,0:30:54.84:499,0,55	1/1:5,14:22:27.06:613,27,0	0/0:21,0:17:25.14:0,25,234	0/0:21,0:21:47.35:0,47,438	0/0:20,0:20:51.07:0,51,530	0/1:22,0:22:99:112,0,139	0/1:16,0:16:99:106,0,124	0/1:20,0:20:74.91:191,0,75	0/0:25,0:25:54.10:0,54,577	0/0:24,0:24:61.55:0,62,629	0/0:23,0:22:51.11:0,51,563	0/0:12,0:12:27.04:0,27,293
chr10	59451920	.	TA	T	4863.19	PASS	AB=0.940;AC=26;AF=0.464;AN=56;BaseQRankSum=10.046;DP=593;FS=13.784;HRun=11;HaplotypeScore=64.8065;InbreedingCoeff=0.8580;MQ=85.11;MQ0=0;MQRankSum=0.468;QD=17.43;ReadPosRankSum=2.320;VQSLOD=4.8530;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:90.57:0,91,943	0/0:8,0:8:24.06:0,24,256	0/1:19,3:21:33.85:34,0,201	0/0:22,1:22:23.31:0,23,374	0/0:39,2:41:71.57:0,72,946	0/0:24,0:24:66.16:0,66,702	0/0:15,0:15:36.09:0,36,384	0/0:24,0:24:60.10:0,60,615	0/0:19,0:19:48.10:0,48,503	1/1:5,18:23:53.92:441,54,0	1/1:0,27:27:74.90:616,75,0	0/0:8,0:8:21.05:0,21,223	0/0:18,1:19:32.43:0,32,527	1/1:3,15:18:23.75:345,24,0	1/1:4,17:22:46.98:375,47,0	1/1:1,12:13:32.82:271,33,0	0/0:28,0:28:63.03:0,63,643	0/0:24,0:24:63.15:0,63,664	1/1:7,7:14:20.96:172,21,0	1/1:6,14:20:41.94:345,42,0	1/1:2,19:21:47.94:394,48,0	0/0:24,0:24:60.15:0,60,640	0/0:25,0:25:57.14:0,57,601	0/1:4,0:4:12.61:13,0,84	1/1:3,18:21:50.93:419,51,0	1/1:1,23:25:70.95:572,71,0	1/1:6,24:30:65.89:542,66,0	1/1:6,13:19:40.32:324,40,0
chr10	59452558	.	A	AACACACACAC	8788.79	PASS	AB=0.691;AC=42;AF=0.750;AN=56;BaseQRankSum=-0.388;DP=695;FS=8.535;HRun=0;HaplotypeScore=227.8098;InbreedingCoeff=-0.1093;MQ=57.34;MQ0=12;MQRankSum=-4.908;QD=15.08;ReadPosRankSum=-2.009;VQSLOD=2.1250;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:34,0:56:99:135,0,299	1/1:7,0:13:11.91:183,12,0	0/0:49,0:21:3.01:0,3,55	0/0:63,0:34:1.24:0,1,3	0/1:19,0:33:30.66:31,0,192	0/1:6,0:15:17.64:18,0,42	0/1:20,0:28:22.47:115,0,22	1/1:23,0:23:25.27:366,25,0	1/1:15,0:25:18.06:449,18,0	0/1:16,0:27:35.78:666,0,36	1/1:11,0:17:11.63:188,12,0	0/1:6,0:15:30.15:30,0,133	0/1:8,0:13:15.77:61,0,16	1/1:8,3:12:5.98:297,6,0	1/1:14,7:23:9.43:331,9,0	1/1:14,0:18:3.01:149,3,0	1/1:20,0:23:6.45:343,6,0	1/1:18,0:18:19.28:282,19,0	1/1:16,0:18:19.44:397,19,0	1/1:17,7:25:11.56:594,12,0	1/1:24,0:23:2.23:119,2,0	0/1:8,0:17:15.97:40,0,16	0/1:16,0:20:4.83:5,0,22	0/1:10,0:31:21.66:89,0,22	1/1:8,7:16:3.01:90,3,0	1/1:19,6:26:56.54:1740,57,0	1/1:17,7:26:30.10:1258,30,0	1/1:12,2:14:18.06:814,18,0
chr10	59453143	.	G	GA	3162.47	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-3.400;DP=427;FS=2.075;HRun=8;HaplotypeScore=54.3095;InbreedingCoeff=0.7723;MQ=37.79;MQ0=59;MQRankSum=-2.131;QD=19.05;ReadPosRankSum=3.062;VQSLOD=3.6195;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:12:25.50:0,25,207	0/0:3,0:2:3:0,3,27	0/0:71,1:5:13.25:0,13,111	0/0:98,0:14:16.12:0,16,79	0/0:10,0:9:12.01:0,12,110	1/1:10,11:20:33.07:332,33,0	1/1:1,3:4:6.02:69,6,0	0/0:29,0:28:44.78:0,45,408	0/0:8,0:8:4.74:0,5,75	1/1:5,11:16:34.01:360,34,0	1/1:2,9:11:18.05:201,18,0	1/1:0,2:2:6.02:67,6,0	1/1:2,6:8:18.73:216,19,0	1/1:2,4:5:11.62:126,12,0	1/1:4,4:7:9.39:87,9,0	1/1:2,7:9:19.30:211,19,0	0/0:12,0:11:11.44:0,11,156	0/0:10,0:9:9.18:0,9,152	1/1:4,8:12:21.06:241,21,0	1/1:1,4:3:9.03:102,9,0	1/1:1,1:2:3.01:35,3,0	1/1:2,1:1:3.01:35,3,0	1/1:6,5:11:15:158,15,0	1/1:3,2:4:6.02:69,6,0	1/1:4,15:18:43.01:485,43,0	1/1:3,7:10:18.49:209,18,0	1/1:7,6:9:30.93:321,31,0	1/1:0,1:1:3.01:35,3,0
chr10	59453170	.	A	AAAAG	2981.45	PASS	AB=0.786;AC=21;AF=0.375;AN=56;BaseQRankSum=-4.870;DP=374;FS=5.308;HRun=0;HaplotypeScore=61.0010;InbreedingCoeff=0.7929;MQ=52.54;MQ0=23;MQRankSum=-1.739;QD=28.13;ReadPosRankSum=3.280;VQSLOD=3.0224;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,12:16:21.07:515,21,0	0/0:2,0:2:6.02:0,6,100	0/0:50,0:6:9.01:0,9,122	0/0:60,0:12:8.04:0,8,167	1/1:3,6:9:18.06:427,18,0	1/1:7,11:19:18.06:440,18,0	1/1:2,6:8:3.01:73,3,0	0/0:25,0:25:57.15:0,57,839	1/1:1,9:10:12.04:294,12,0	0/0:13,0:12:24.08:0,24,384	0/0:4,0:4:6.02:0,6,100	1/1:4,2:6:18.05:378,18,0	0/1:8,3:11:1.59:316,0,2	0/0:8,0:8:24.07:0,24,375	0/0:9,0:9:17.73:0,18,259	0/0:11,0:11:23.97:0,24,364	0/0:13,0:13:20.89:0,21,284	1/1:3,7:10:17.14:436,17,0	0/0:17,0:16:36.10:0,36,542	0/0:4,0:3:9.03:0,9,149	0/0:5,0:4:12.04:0,12,199	1/1:2,0:2:3.01:36,3,0	1/1:4,2:6:9.03:190,9,0	1/1:2,5:7:3.01:74,3,0	0/0:19,0:19:57.15:0,57,914	0/0:10,0:10:30.10:0,30,498	0/0:13,0:11:27.08:0,27,419	0/0:5,0:5:14.98:0,15,169
chr10	59454806	.	GA	G	5356.84	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=11.783;DP=520;FS=6.627;HRun=9;HaplotypeScore=51.9089;InbreedingCoeff=0.9797;MQ=69.57;MQ0=2;MQRankSum=-1.315;QD=23.70;ReadPosRankSum=2.829;VQSLOD=5.7086;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:72.21:0,72,831	0/0:5,0:5:15.04:0,15,173	0/0:19,0:17:47.89:0,48,476	0/0:13,0:12:15.19:0,15,252	0/0:20,0:20:57.17:0,57,655	0/0:20,0:20:57.15:0,57,647	0/0:15,0:15:39.12:0,39,450	0/0:34,0:35:69.02:0,69,759	0/0:22,0:22:60.18:0,60,692	1/1:3,19:22:57.01:516,57,0	1/1:1,15:16:42.02:384,42,0	0/0:14,0:14:39.10:0,39,440	0/0:10,0:10:24.07:0,24,275	1/1:0,15:15:39.02:357,39,0	1/1:1,24:25:72.04:659,72,0	1/1:4,14:18:7.40:322,7,0	0/0:29,1:30:59.74:0,60,917	0/0:17,0:17:45.13:0,45,519	1/1:1,17:17:51.02:463,51,0	1/1:3,13:16:39.02:357,39,0	1/1:3,18:21:42.02:384,42,0	0/0:12,0:12:36.11:0,36,415	0/0:14,0:14:39.12:0,39,450	0/0:21,0:21:39.12:0,39,450	1/1:1,18:19:54.03:494,54,0	1/1:1,28:29:84:761,84,0	1/1:3,20:23:60.03:549,60,0	1/1:0,4:4:12.01:110,12,0
chr10	59456910	.	G	GAGGA	3120.79	PASS	AB=0.773;AC=36;AF=0.643;AN=56;BaseQRankSum=1.866;DP=286;FS=9.908;HRun=0;HaplotypeScore=75.0136;InbreedingCoeff=0.6337;MQ=43.21;MQ0=6;MQRankSum=-2.726;QD=22.45;ReadPosRankSum=-1.713;VQSLOD=2.0986;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,0:10:6.02:129,6,0	1/1:3,0:3:3.01:61,3,0	0/0:19,0:3:8.90:0,9,108	0/0:23,0:8:17.71:0,18,213	1/1:8,0:8:6.02:130,6,0	0/0:14,0:14:26.65:0,27,343	0/0:27,0:27:51.53:0,52,647	1/1:16,0:16:36.07:513,36,0	1/1:14,0:14:28.56:459,29,0	1/1:2,0:2:5.93:60,6,0	1/1:2,0:2:3.01:36,3,0	0/0:17,0:17:21.86:0,22,387	0/0:11,0:11:26.61:0,27,435	1/1:5,0:4:9.03:182,9,0	0/1:2,9:12:11.41:119,0,11	1/1:4,0:4:9.03:164,9,0	1/1:2,10:13:6.02:114,6,0	1/1:7,0:7:9.69:96,10,0	0/1:3,0:3:0:0,0,0	1/1:1,0:1:3.01:74,3,0	1/1:15,0:15:32.31:472,32,0	0/0:13,0:13:15.04:0,15,227	0/0:13,0:13:6.80:0,7,273	0/0:10,0:10:4.83:0,5,55	1/1:7,0:7:11.90:182,12,0	1/1:4,0:4:9.03:183,9,0	1/1:10,0:9:1.17:261,1,0	1/1:3,0:2:3.01:74,3,0
chr10	59456925	.	GAAGA	G	222.93	PASS	AB=0.966;AC=17;AF=0.304;AN=56;BaseQRankSum=2.529;DP=317;FS=3.487;HRun=0;HaplotypeScore=77.0432;InbreedingCoeff=-0.1581;MQ=43.50;MQ0=13;MQRankSum=-3.318;QD=1.33;ReadPosRankSum=-5.682;VQSLOD=0.0981;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:10.09:0,10,70	0/0:2,0:1:0.89:0,1,2	0/0:24,0:3:9.03:0,9,131	0/0:26,0:7:18:0,18,287	0/0:7,0:7:9.60:0,10,52	0/0:12,1:13:7.27:0,7,328	0/1:28,2:30:5.91:6,0,667	0/1:13,0:13:60.07:60,0,63	0/1:14,0:14:22.87:23,0,119	1/1:2,0:2:2.96:20,3,0	1/1:2,0:2:0.47:1,0,0	0/0:18,0:18:32.22:0,32,463	0/1:9,5:14:9.78:10,0,459	0/1:8,0:7:6.47:69,0,6	0/1:14,0:14:17.06:17,0,42	0/1:4,0:4:8.55:9,0,18	0/1:14,0:14:10.01:10,0,40	0/1:7,1:8:41.53:42,0,80	0/0:6,0:4:9.89:0,10,88	0/0:1,0:1:3.01:0,3,39	0/1:21,0:20:66.72:67,0,82	0/0:10,0:10:19.96:0,20,251	0/1:14,0:14:3.10:3,0,316	0/0:16,0:16:6:0,6,80	0/1:7,0:7:6.60:7,0,37	0/1:3,0:3:1.08:21,0,1	0/0:12,0:11:2.43:0,2,127	0/0:2,0:2:3:0,3,26
chr10	59458944	.	TCCGGGGGGGG	T	3653.30	PASS	AB=0.542;AC=22;AF=0.423;AN=52;BaseQRankSum=7.067;DP=205;FS=0.769;HRun=0;HaplotypeScore=50.9752;InbreedingCoeff=0.6198;MQ=49.10;MQ0=7;MQRankSum=-1.032;QD=33.52;ReadPosRankSum=6.603;VQSLOD=2.2055;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:4:9.03:0,9,123	0/0:1,0:1:0:0,0,0	1/1:8,0:3:2.94:48,3,0	0/0:5,0:3:5.82:0,6,204	0/0:7,0:7:6.02:0,6,83	0/0:3,0:3:6.02:0,6,161	0/0:14,0:12:14.80:0,15,254	0/0:9,0:8:22.57:0,23,246	0/0:4,0:4:3.01:0,3,35	1/1:0,3:3:6.02:203,6,0	./.	0/0:7,0:7:15.04:0,15,399	./.	1/1:0,10:10:6.02:203,6,0	1/1:0,8:10:21.07:674,21,0	1/1:0,10:12:21.07:612,21,0	0/0:14,0:14:31.26:0,31,527	0/0:10,0:9:25.33:0,25,383	1/1:1,10:11:20.93:350,21,0	0/1:2,8:10:99:194,0,133	0/1:1,7:8:0:0,0,0	0/0:4,0:4:6.02:0,6,67	0/0:1,0:1:3.01:0,3,38	0/0:2,0:2:3.01:0,3,47	1/1:0,5:6:9.03:284,9,0	1/1:0,12:14:21.07:553,21,0	1/1:0,13:13:15.04:488,15,0	1/1:2,0:1:3.01:44,3,0
chr10	59458965	.	GAA	G	448.55	PASS	AC=4;AF=0.074;AN=54;BaseQRankSum=-1.812;DP=247;FS=5.160;HRun=2;HaplotypeScore=54.6356;InbreedingCoeff=0.6585;MQ=79.43;MQ0=6;MQRankSum=2.349;QD=28.03;ReadPosRankSum=-0.253;VQSLOD=2.6551;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:36.05:0,36,489	./.	0/0:33,0:21:38.48:0,38,627	0/0:20,0:15:26.95:0,27,358	0/0:4,0:4:9.03:0,9,139	0/0:3,0:3:9.03:0,9,124	0/0:9,0:8:21.07:0,21,280	1/1:0,4:4:12.04:153,12,0	0/0:2,0:2:3.01:0,3,44	0/0:11,0:11:33.10:0,33,443	0/0:5,0:5:15.04:0,15,214	0/0:4,0:4:12.04:0,12,159	0/0:4,0:4:12.04:0,12,174	0/0:4,0:4:7.56:0,8,72	0/0:19,0:19:49.39:0,49,509	0/0:9,0:9:19.85:0,20,117	1/1:12,0:12:33.10:410,33,0	0/0:10,0:9:24.08:0,24,336	0/0:9,0:9:22.31:0,22,300	0/0:15,0:15:45.11:0,45,584	0/0:12,0:12:33:0,33,455	0/0:3,0:3:6.02:0,6,88	0/0:4,0:4:8.86:0,9,125	0/0:1,0:1:3.01:0,3,34	0/0:10,0:10:24.03:0,24,295	0/0:11,0:11:30.05:0,30,341	0/0:12,0:12:23.58:0,24,243	0/0:4,0:3:9.03:0,9,127
chr10	59461266	.	GTTC	G	11681.01	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=16.180;DP=698;FS=4.892;HRun=0;HaplotypeScore=104.8832;InbreedingCoeff=0.9995;MQ=88.60;MQ0=1;MQRankSum=-6.538;QD=41.13;ReadPosRankSum=3.342;VQSLOD=6.4414;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,153,3240	0/0:10,0:10:30.10:0,30,670	0/0:27,0:27:75.26:0,75,1581	0/0:30,0:29:41:0,41,1461	0/0:29,0:29:87.26:0,87,1877	0/0:18,0:18:48.16:0,48,1072	0/0:27,0:27:81.28:0,81,1789	0/0:43,0:43:99:0,114,2487	0/0:19,0:19:57.17:0,57,1211	1/1:2,23:25:69.24:1118,69,0	1/1:1,16:17:39.13:636,39,0	0/0:23,0:23:63.20:0,63,1364	0/0:30,0:30:90.31:0,90,1992	1/1:0,10:10:30.10:489,30,0	1/1:2,25:27:66.23:1077,66,0	1/1:2,24:26:63.21:1012,63,0	0/0:28,0:28:81.28:0,81,1784	0/0:13,0:13:36.12:0,36,804	1/1:2,16:18:48.12:742,48,0	1/1:3,26:29:66.23:1076,66,0	1/1:1,41:42:99:1665,102,0	0/0:19,0:19:45.15:0,45,972	0/0:16,0:16:48.16:0,48,1071	0/0:30,0:30:87.26:0,87,1879	1/1:1,21:22:63.22:1028,63,0	1/1:1,28:29:84.23:1320,84,0	1/1:4,24:29:69.24:1126,69,0	1/1:1,9:10:24.08:392,24,0
chr10	59462728	.	CGCGCGCGCGT	C	9700.42	PASS	AB=1.000;AC=49;AF=0.907;AN=54;BaseQRankSum=1.926;DP=395;FS=5.308;HRun=0;HaplotypeScore=166.9166;InbreedingCoeff=0.1587;MQ=56.44;MQ0=2;MQRankSum=-2.992;QD=25.33;ReadPosRankSum=1.366;VQSLOD=4.1308;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:28:6.02:112,6,0	0/1:12,0:12:0.37:41,0,0	./.	0/0:11,0:9:4.20:0,4,81	1/1:12,0:12:17.49:273,17,0	1/1:12,0:12:17.84:273,18,0	1/1:23,0:23:14.13:192,14,0	1/1:16,0:15:3.64:23,4,0	1/1:17,0:17:21.32:381,21,0	1/1:8,8:16:39.13:1124,39,0	1/1:6,6:12:12.01:257,12,0	1/1:12,0:12:12.04:227,12,0	1/1:12,0:12:17.97:193,18,0	1/1:8,4:11:15.05:459,15,0	1/1:11,5:16:18.02:405,18,0	1/1:10,1:11:24.04:660,24,0	1/1:21,0:21:0.38:220,0,0	1/1:14,0:14:27.71:382,28,0	1/1:9,4:13:17.87:407,18,0	1/1:7,7:14:21.07:629,21,0	1/1:13,0:13:11.02:115,11,0	1/1:12,0:12:8.55:155,9,0	0/1:19,0:19:55.56:434,0,56	0/1:20,0:20:33.73:195,0,34	1/1:6,7:13:12.04:365,12,0	1/1:9,4:12:27.09:798,27,0	1/1:10,6:16:33.11:1006,33,0	1/1:2,2:4:12.04:375,12,0
chr10	59462732	.	CGCGCGT	C	9053.75	PASS	AC=52;AF=0.963;AN=54;BaseQRankSum=-0.915;DP=373;FS=12.296;HRun=0;HaplotypeScore=139.4177;InbreedingCoeff=0.5388;MQ=52.28;MQ0=6;MQRankSum=-1.519;QD=24.87;ReadPosRankSum=2.336;VQSLOD=4.0290;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,21:27:6.02:129,6,0	1/1:11,0:11:12.03:146,12,0	./.	0/0:8,0:6:4.51:0,5,38	1/1:9,2:12:18.55:380,19,0	1/1:10,3:13:22.75:487,23,0	1/1:6,20:24:14.74:316,15,0	1/1:15,0:13:12.39:107,12,0	1/1:14,2:16:33.10:600,33,0	1/1:16,0:16:39.11:652,39,0	1/1:9,0:9:11.94:147,12,0	1/1:4,8:12:12.04:255,12,0	1/1:5,2:7:17.99:348,18,0	1/1:12,0:11:15.05:258,15,0	1/1:14,0:14:17.97:229,18,0	1/1:11,0:10:24.04:390,24,0	1/1:20,0:20:37.91:497,38,0	1/1:12,5:17:37.65:654,38,0	1/1:9,0:9:17.87:239,18,0	1/1:14,0:14:21.07:357,21,0	1/1:12,0:12:10.94:66,11,0	1/1:3,7:10:8.62:193,9,0	1/1:18,2:19:44.80:762,45,0	1/1:15,5:20:24.51:397,25,0	1/1:11,0:11:12.04:212,12,0	1/1:12,0:11:27.05:444,27,0	1/1:14,0:14:33.11:584,33,0	1/1:4,0:4:12.04:204,12,0
chr10	59462734	.	CGCGT	C	6603.13	PASS	AC=52;AF=0.963;AN=54;BaseQRankSum=-0.670;DP=371;FS=12.478;HRun=0;HaplotypeScore=137.4481;InbreedingCoeff=0.4912;MQ=50.66;MQ0=7;MQRankSum=-1.316;QD=18.19;ReadPosRankSum=2.407;VQSLOD=4.1355;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:26:6.02:80,6,0	1/1:1,10:11:12.04:200,12,0	./.	0/0:7,0:5:4.50:0,4,28	1/1:15,0:15:5.03:237,5,0	1/1:17,0:17:23.29:305,23,0	1/1:26,0:24:15:217,15,0	1/1:14,0:11:13.65:124,14,0	1/1:16,0:16:32.98:364,33,0	1/1:15,0:15:38.90:453,39,0	1/1:8,0:8:11.94:115,12,0	1/1:12,0:12:12.04:159,12,0	1/1:8,0:8:17.99:237,18,0	1/1:12,0:11:15.05:182,15,0	1/1:13,0:13:17.84:170,18,0	1/1:11,0:10:24.03:288,24,0	1/1:17,1:18:39.05:623,39,0	1/1:18,0:18:37.65:458,38,0	1/1:8,0:8:17.86:169,18,0	1/1:12,0:12:21:246,21,0	1/1:11,0:11:10.94:66,11,0	1/1:10,0:10:8.55:127,9,0	1/1:20,1:20:44.79:527,45,0	1/1:20,0:20:21.02:236,21,0	1/1:11,0:11:12.04:153,12,0	1/1:12,0:11:27.04:313,27,0	1/1:14,0:14:33.10:411,33,0	1/1:4,0:4:12.03:143,12,0
chr10	59462736	.	CGT	C	4272.09	PASS	AC=52;AF=0.963;AN=54;BaseQRankSum=-0.948;DP=366;FS=12.478;HRun=0;HaplotypeScore=136.8479;InbreedingCoeff=0.4715;MQ=50.36;MQ0=8;MQRankSum=-1.426;QD=11.93;ReadPosRankSum=2.571;VQSLOD=4.1402;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:22,3:25:6:51,6,0	1/1:10,1:11:12.02:121,12,0	./.	0/0:7,0:5:4.21:0,4,15	1/1:12,3:15:4.28:163,4,0	1/1:14,3:17:23.31:201,23,0	1/1:24,2:24:14.75:134,15,0	1/1:14,0:11:13.65:98,14,0	1/1:8,8:16:32.18:236,32,0	1/1:9,5:14:38.47:276,38,0	1/1:7,1:8:11.89:84,12,0	1/1:8,4:12:11.99:101,12,0	1/1:6,2:8:17.96:162,18,0	1/1:10,4:13:14.95:117,15,0	1/1:8,3:11:17.28:118,17,0	1/1:4,6:9:23.91:187,24,0	1/1:11,5:16:38.99:373,39,0	1/1:17,3:20:37.57:306,38,0	1/1:7,1:8:17.55:108,18,0	1/1:12,3:14:19.96:144,20,0	1/1:11,0:11:10.94:66,11,0	1/1:7,2:9:8.97:80,9,0	1/1:16,5:20:44.70:378,45,0	1/1:16,3:19:18.32:156,18,0	1/1:8,3:11:11.96:94,12,0	1/1:5,5:9:26.70:190,27,0	1/1:6,7:13:32.78:245,33,0	1/1:2,2:4:11.85:84,12,0
chr10	59462741	.	GCGCGCGCGCACACA	G	10634	PASS	AB=0.982;AC=43;AF=0.827;AN=52;BaseQRankSum=4.188;DP=388;FS=2.131;HRun=0;HaplotypeScore=174.6211;InbreedingCoeff=-0.0377;MQ=48.89;MQ0=11;MQRankSum=-0.873;QD=28.28;ReadPosRankSum=3.684;VQSLOD=4.2582;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:28:6.02:218,6,0	0/1:13,0:13:35.27:37,0,35	./.	0/0:7,0:5:2.34:0,2,73	1/1:17,0:16:18.04:397,18,0	1/1:18,0:18:20.10:428,20,0	1/1:26,0:24:14.52:315,15,0	0/1:13,0:9:9.08:53,0,9	1/1:16,0:16:24.52:683,25,0	1/1:9,5:14:37.68:948,38,0	1/1:8,1:9:11.67:195,12,0	1/1:15,0:15:15.05:486,15,0	1/1:8,0:8:15.02:227,15,0	1/1:12,4:15:15.05:473,15,0	1/1:8,3:10:13.29:364,13,0	1/1:4,5:9:21.07:700,21,0	0/1:21,0:21:20.42:232,0,20	0/1:21,0:21:4.40:513,0,4	0/1:6,1:7:15.63:252,0,16	1/1:14,2:16:21.07:530,21,0	./.	1/1:10,0:10:9.03:256,9,0	0/1:22,0:21:37.18:640,0,37	0/1:22,0:22:99:264,0,106	1/1:8,3:11:11.61:385,12,0	1/1:8,4:12:16.98:686,17,0	1/1:7,7:14:21.14:993,21,0	1/1:2,2:4:12.04:360,12,0
chr10	59462745	.	GCGCGCACACACA	G	9741.66	PASS	AB=0.953;AC=45;AF=0.865;AN=52;BaseQRankSum=3.231;DP=422;FS=4.810;HRun=0;HaplotypeScore=182.3034;InbreedingCoeff=0.0696;MQ=45.45;MQ0=11;MQRankSum=-0.905;QD=23.76;ReadPosRankSum=3.397;VQSLOD=3.3457;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:26,3:29:9.02:259,9,0	1/1:12,0:12:12.04:219,12,0	./.	0/0:5,0:3:3.01:0,3,30	1/1:14,3:16:19.27:303,19,0	1/1:17,3:20:21.86:391,22,0	1/1:26,2:25:14.99:292,15,0	1/1:18,0:14:24.41:445,24,0	1/1:9,7:16:27.54:615,28,0	1/1:17,0:17:43.47:639,43,0	0/1:13,0:13:4.66:116,0,5	1/1:11,4:15:15.05:455,15,0	1/1:7,2:9:15.01:211,15,0	1/1:17,0:16:12.04:306,12,0	1/1:11,0:10:12.03:239,12,0	1/1:11,0:10:21.06:520,21,0	1/1:21,0:21:39.11:919,39,0	0/1:19,3:22:8.92:488,0,9	0/1:12,0:12:33.27:160,0,33	1/1:17,0:16:21.04:341,21,0	./.	1/1:9,2:11:9.03:226,9,0	1/1:13,5:17:26.10:588,26,0	0/1:20,2:23:89.09:276,0,89	1/1:14,0:14:17.73:327,18,0	0/1:19,0:18:20.80:511,0,21	1/1:16,0:16:25.02:662,25,0	1/1:4,0:4:12.01:234,12,0
chr10	59462747	.	GCGCACACACA	G	7766.98	PASS	AB=1.000;AC=45;AF=0.865;AN=52;BaseQRankSum=2.782;DP=425;FS=1.471;HRun=0;HaplotypeScore=180.6469;InbreedingCoeff=0.0772;MQ=45.35;MQ0=12;MQRankSum=-0.567;QD=18.94;ReadPosRankSum=2.759;VQSLOD=4.0362;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:30:12.04:293,12,0	1/1:10,1:11:11.78:133,12,0	./.	0/0:6,0:3:2.92:0,3,17	1/1:16,0:15:17.34:224,17,0	1/1:19,0:19:19.84:295,20,0	1/1:27,0:24:14.49:217,14,0	1/1:20,0:15:29.05:481,29,0	1/1:15,0:15:25.93:511,26,0	1/1:17,0:17:39.40:485,39,0	0/1:14,0:14:2.19:100,0,2	1/1:14,0:14:15.05:409,15,0	1/1:9,0:9:14.30:141,14,0	1/1:18,0:17:12.04:256,12,0	1/1:12,0:11:14.45:198,14,0	1/1:11,0:10:20.66:430,21,0	1/1:16,5:21:38.11:643,38,0	0/1:23,0:23:7.72:362,0,8	0/1:12,0:12:25.21:113,0,25	1/1:16,0:15:17.07:230,17,0	./.	1/1:10,0:10:8.92:186,9,0	1/1:18,0:17:27.57:471,28,0	0/1:23,0:23:89.31:181,0,89	1/1:15,0:15:20.10:293,20,0	0/1:19,0:18:21.94:408,0,22	1/1:16,0:16:34.60:526,35,0	1/1:4,0:4:11.40:183,11,0
chr10	59462749	.	GCACACACA	G	6190.13	PASS	AB=0.928;AC=45;AF=0.865;AN=52;BaseQRankSum=0.967;DP=425;FS=2.285;HRun=0;HaplotypeScore=178.2144;InbreedingCoeff=-0.0787;MQ=44.72;MQ0=13;MQRankSum=-0.733;QD=15.13;ReadPosRankSum=0.510;VQSLOD=4.1674;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:29:13.29:288,13,0	1/1:11,0:11:3:71,3,0	./.	./.	1/1:10,6:15:7.84:148,8,0	1/1:12,8:20:9.02:202,9,0	1/1:24,0:21:6.02:143,6,0	1/1:10,10:15:29.48:494,29,0	1/1:11,0:15:20.80:413,21,0	1/1:17,0:17:14.73:380,15,0	0/1:15,0:16:1.54:161,0,2	1/1:14,0:14:15.05:358,15,0	1/1:6,3:9:3.01:72,3,0	1/1:10,0:17:12.04:205,12,0	1/1:13,0:12:9.85:163,10,0	1/1:8,0:10:15.30:338,15,0	1/1:23,0:23:26.01:509,26,0	0/1:13,9:23:21.04:267,0,21	0/1:11,0:11:30.54:89,0,31	1/1:11,0:15:2.02:147,2,0	0/0:8,0:8:0:0,0,0	1/1:9,0:9:6.02:145,6,0	1/1:13,4:16:15.05:349,15,0	0/1:23,0:23:97.01:117,0,97	1/1:15,0:15:15.44:281,15,0	0/1:19,0:18:25.16:322,0,25	1/1:16,0:16:18.48:399,18,0	1/1:4,0:4:5.44:131,5,0
chr10	59462868	.	TAC	T	896.14	PASS	AB=0.870;AC=26;AF=0.481;AN=54;BaseQRankSum=2.020;DP=513;FS=4.336;HRun=0;HaplotypeScore=100.7601;InbreedingCoeff=0.7024;MQ=60.52;MQ0=21;MQRankSum=-2.929;QD=3.67;ReadPosRankSum=2.885;VQSLOD=2.1919;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:27:8.52:42,9,0	1/1:4,0:8:12.25:58,12,0	./.	0/1:23,0:10:0:0,0,0	1/1:8,0:22:5.20:79,5,0	0/1:10,6:17:14.11:86,0,14	1/1:14,9:24:6.50:143,6,0	0/0:13,0:23:2.42:0,2,6	1/1:4,0:10:7.01:39,7,0	0/0:19,0:19:35.87:0,36,353	0/0:13,0:24:14.29:0,14,115	1/1:2,5:6:6.02:66,6,0	1/1:4,0:4:3.01:33,3,0	0/0:10,0:10:14.15:0,14,150	0/0:9,0:9:8.61:0,9,80	0/0:5,0:10:9.01:0,9,97	1/1:13,0:26:5.68:28,6,0	1/1:14,0:18:2.84:14,3,0	0/0:11,0:11:11.89:0,12,99	0/0:16,0:22:21.04:0,21,267	0/0:21,0:24:38.87:0,39,389	1/1:5,5:11:12.02:131,12,0	1/1:8,9:17:17.88:178,18,0	1/1:18,6:25:20.26:189,20,0	0/0:13,0:22:21:0,21,199	0/0:19,0:28:31.80:0,32,291	0/0:9,0:14:17.99:0,18,172	0/0:8,0:13:11.98:0,12,101
chr10	59463111	.	C	CT	8338.67	PASS	AB=1.000;AC=39;AF=0.696;AN=56;BaseQRankSum=-10.412;DP=525;FS=7.568;HRun=9;HaplotypeScore=62.4600;InbreedingCoeff=0.8491;MQ=78.83;MQ0=0;MQRankSum=-0.238;QD=22.91;ReadPosRankSum=1.067;VQSLOD=5.7326;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,33:37:90.08:977,90,0	1/1:0,6:6:15.04:166,15,0	0/0:28,0:21:36.63:0,37,277	0/1:29,0:23:22.38:22,0,93	1/1:1,21:22:56.99:577,57,0	0/0:22,0:22:65.99:0,66,573	0/0:24,0:24:65.97:0,66,573	1/1:4,15:19:42.11:464,42,0	1/1:2,13:16:33.09:362,33,0	1/1:2,17:19:51.12:554,51,0	1/1:6,7:13:4.04:264,4,0	0/0:13,0:13:35.99:0,36,312	0/0:20,0:20:50.97:0,51,443	1/1:2,17:19:28.09:538,28,0	1/1:2,12:14:20.89:227,21,0	1/1:2,14:16:36.09:390,36,0	1/1:2,24:26:69.19:763,69,0	1/1:3,12:15:36.10:398,36,0	1/1:2,17:19:45.07:469,45,0	1/1:3,11:14:6.98:280,7,0	1/1:3,13:16:36.10:398,36,0	0/0:12,0:12:26.97:0,27,231	0/0:16,1:17:8.79:0,9,305	0/0:23,0:23:59.98:0,60,521	1/1:9,3:12:17.99:171,18,0	1/1:1,23:24:63.16:688,63,0	1/1:4,19:23:51.14:563,51,0	1/1:0,3:3:6.02:66,6,0
chr10	59466274	.	AG	A	11517.91	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=3.782;DP=790;FS=6.470;HRun=2;HaplotypeScore=89.3924;InbreedingCoeff=0.9998;MQ=65.36;MQ0=3;MQRankSum=-0.734;QD=35.66;ReadPosRankSum=3.102;VQSLOD=5.2676;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:62,0:62:99:0,184,2664	0/0:10,0:10:30.09:0,30,430	0/0:38,0:32:87.24:0,87,1192	0/0:36,0:32:60.46:0,60,1046	0/0:25,0:25:75.23:0,75,1084	0/0:22,0:22:66.21:0,66,967	0/0:32,0:32:93.26:0,93,1314	0/0:38,0:38:99:0,114,1689	0/0:27,0:27:81.25:0,81,1173	1/1:0,23:22:66.15:811,66,0	1/1:0,14:14:42.14:545,42,0	0/0:32,0:32:96.33:0,96,1439	0/0:23,0:23:69.21:0,69,992	1/1:0,26:26:75.24:974,75,0	1/1:0,34:34:93.26:1207,93,0	1/1:0,30:30:84.27:1091,84,0	0/0:34,0:34:99:0,99,1461	0/0:14,0:14:42.14:0,42,623	1/1:2,20:22:57.18:737,57,0	1/1:0,23:23:66.21:857,66,0	1/1:1,64:65:99:2259,175,0	0/0:19,0:19:57.19:0,57,830	0/0:23,0:23:63.21:0,63,943	0/0:32,0:32:93.32:0,93,1394	1/1:1,11:12:27.09:351,27,0	1/1:0,29:29:87.28:1129,87,0	1/1:0,32:32:84.11:1090,84,0	1/1:0,13:13:36.12:467,36,0
chr10	59466512	.	GGA	G	2163.81	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=9.201;DP=578;FS=1.699;HRun=0;HaplotypeScore=66.2384;InbreedingCoeff=0.9541;MQ=71.30;MQ0=1;MQRankSum=-1.334;QD=23.27;ReadPosRankSum=1.766;VQSLOD=4.1450;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,23:23:33.11:504,33,0	0/0:10,0:10:30.08:0,30,463	0/0:16,0:15:3.72:0,4,510	0/0:15,0:15:32.92:0,33,371	1/1:2,21:22:41.82:484,42,0	0/0:28,0:28:84.23:0,84,1345	0/0:24,0:24:69.22:0,69,1156	0/0:33,0:33:96.28:0,96,1458	1/1:0,22:22:39.13:596,39,0	0/0:17,0:17:48.15:0,48,763	0/0:14,0:14:39.12:0,39,631	0/0:26,0:26:75.21:0,75,1190	0/0:26,0:26:75.23:0,75,1242	0/0:11,0:11:32.87:0,33,477	0/0:22,0:22:66.20:0,66,1081	0/0:29,0:29:84.24:0,84,1370	0/0:31,0:31:86.08:0,86,1417	1/1:2,23:25:50.76:740,51,0	0/0:21,0:21:63.18:0,63,988	0/0:14,0:14:16.78:0,17,563	0/0:22,0:22:66.17:0,66,1023	0/0:21,0:21:60.17:0,60,978	0/0:18,0:18:48.11:0,48,735	0/0:14,0:14:42.11:0,42,660	0/0:17,0:17:48.07:0,48,702	0/0:22,0:22:63.19:0,63,1016	0/0:26,0:26:75.20:0,75,1194	0/0:8,0:8:24.08:0,24,403
chr10	59467113	.	A	ATTT	5338.92	PASS	AB=0.698;AC=50;AF=0.893;AN=56;BaseQRankSum=-2.381;DP=570;FS=4.610;HRun=14;HaplotypeScore=100.1703;InbreedingCoeff=0.0857;MQ=72.62;MQ0=2;MQRankSum=-0.917;QD=9.80;ReadPosRankSum=0.471;VQSLOD=2.2681;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:8,0:33:5.34:40,0,5	1/1:2,4:8:7.27:105,7,0	0/0:24,0:20:3.99:0,4,70	0/1:29,0:24:36.05:36,0,102	0/1:9,0:19:26.28:26,0,100	1/1:2,10:15:15.01:199,15,0	1/1:7,5:19:27:304,27,0	1/1:10,12:23:34.91:562,35,0	1/1:10,0:18:5.48:28,5,0	1/1:15,0:32:45.43:380,45,0	1/1:2,0:7:20.93:197,21,0	1/1:11,7:22:18.02:239,18,0	1/1:9,0:9:18.04:258,18,0	1/1:14,1:29:3.35:246,3,0	1/1:1,1:15:20.47:187,20,0	1/1:5,0:15:17.97:166,18,0	1/1:9,14:26:15.78:217,16,0	0/1:6,0:29:23.14:32,0,23	1/1:13,0:25:11.89:184,12,0	1/1:5,0:13:22.08:163,22,0	1/1:4,0:8:8.97:68,9,0	1/1:6,1:19:26.79:220,27,0	1/1:8,13:27:0.92:322,1,0	1/1:9,14:26:21.03:290,21,0	1/1:6,1:23:29.93:277,30,0	1/1:9,2:25:16.58:403,17,0	1/1:11,0:22:9.67:70,10,0	1/1:2,1:7:11.98:120,12,0
chr10	59468864	.	AACACACACAC	A	5503.08	PASS	AB=0.947;AC=24;AF=0.429;AN=56;BaseQRankSum=2.877;DP=585;FS=11.494;HRun=0;HaplotypeScore=178.4277;InbreedingCoeff=0.6039;MQ=66.43;MQ0=9;MQRankSum=-4.838;QD=18.40;ReadPosRankSum=1.496;VQSLOD=3.4867;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:43,0:42:14.76:556,0,15	1/1:4,0:8:6:59,6,0	0/0:24,0:18:2.99:0,3,23	0/0:31,0:22:8.97:0,9,83	0/1:24,0:24:26.02:343,0,26	1/1:11,12:22:21.05:627,21,0	1/1:9,10:19:8.92:268,9,0	0/1:22,0:28:10.51:11,0,75	1/1:13,0:13:10.28:239,10,0	0/0:13,0:20:35.99:0,36,1162	0/0:14,0:14:11.94:0,12,464	1/1:10,11:22:17.17:516,17,0	1/1:5,17:22:36.12:1053,36,0	0/0:6,0:15:12.04:0,12,450	0/0:17,0:24:39.12:0,39,1420	0/0:8,0:18:21.05:0,21,699	1/1:15,0:27:12.08:273,12,0	0/1:15,0:15:42.82:75,0,43	0/0:21,0:21:15.04:0,15,516	0/0:12,0:16:9.32:0,9,202	0/0:13,0:13:9.50:0,10,346	1/1:6,10:15:24.08:666,24,0	1/1:7,12:20:19.07:550,19,0	1/1:10,7:17:8.92:268,9,0	0/0:15,0:15:15.05:0,15,635	0/0:28,0:27:51.18:0,51,1901	0/0:27,0:28:48.14:0,48,1605	0/0:7,0:16:9.03:0,9,392
chr10	59468898	.	CACACACACAA	C	4860.07	PASS	AB=1.000;AC=18;AF=0.321;AN=56;BaseQRankSum=8.727;DP=609;FS=2.463;HRun=0;HaplotypeScore=179.1557;InbreedingCoeff=0.1407;MQ=57.87;MQ0=17;MQRankSum=-7.978;QD=16.31;ReadPosRankSum=7.537;VQSLOD=3.2516;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:5,27:31:8.88:688,9,0	0/1:10,0:10:20.23:20,0,112	0/0:31,0:17:34.88:0,35,418	0/0:28,0:15:22.20:0,22,260	1/1:4,23:27:26.84:541,27,0	0/1:22,0:21:99:437,0,152	0/1:23,0:23:99:164,0,263	0/1:28,0:25:35.25:35,0,498	1/1:1,10:11:4.68:283,5,0	0/0:31,0:28:75.15:0,75,1656	0/0:15,0:14:30.46:0,30,681	0/1:19,0:19:99:361,0,113	0/1:25,0:25:99:756,0,116	0/0:16,0:16:21.05:0,21,513	0/0:31,0:30:67.98:0,68,1762	0/0:19,0:19:39.05:0,39,1032	0/1:24,0:24:99:144,0,108	1/1:22,1:23:43.84:427,44,0	0/0:19,0:18:46.60:0,47,844	0/0:15,0:15:27.90:0,28,412	0/0:16,0:16:31.01:0,31,601	0/1:20,0:19:99:464,0,154	0/1:19,0:19:99:363,0,137	0/1:15,0:15:99:178,0,235	0/0:12,0:12:30.03:0,30,703	0/0:34,0:33:93.21:0,93,2195	0/0:28,0:28:70.68:0,71,1895	0/0:16,0:16:24.05:0,24,724
chr10	59470273	.	TC	T	770.89	PASS	AB=0.955;AC=8;AF=0.143;AN=56;BaseQRankSum=2.826;DP=506;FS=21.099;HRun=10;HaplotypeScore=69.8844;InbreedingCoeff=0.7559;MQ=74.34;MQ0=1;MQRankSum=-0.398;QD=8.76;ReadPosRankSum=0.438;VQSLOD=0.5912;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,1:32:47.01:0,47,722	1/1:4,7:11:29.03:239,29,0	0/1:16,0:15:2.23:2,0,118	0/0:15,0:11:23.98:0,24,172	0/0:15,0:15:30.07:0,30,324	0/0:30,0:30:72.65:0,73,789	0/0:32,1:33:49.18:0,49,770	1/1:13,11:24:38.94:332,39,0	0/0:20,0:20:48.13:0,48,531	0/0:12,0:12:27.07:0,27,297	0/0:8,0:8:12.03:0,12,133	0/1:18,2:20:3.94:4,0,416	0/0:11,0:11:27.05:0,27,282	0/0:16,0:16:33.08:0,33,358	0/0:23,1:25:60:0,60,645	0/0:25,0:25:60.15:0,60,649	1/1:4,13:17:38.98:338,39,0	0/0:10,0:10:27.04:0,27,286	0/0:12,0:12:21.06:0,21,232	0/0:8,0:8:12.02:0,12,125	0/0:21,0:21:45.09:0,45,479	0/0:14,0:14:30.08:0,30,332	0/0:4,0:11:9.18:0,9,59	0/0:35,3:39:46.95:0,47,944	0/0:10,0:10:26.88:0,27,250	0/0:19,1:20:18.94:0,19,420	0/0:19,0:19:30.06:0,30,321	0/0:12,0:12:27.06:0,27,290
chr10	59470320	.	C	CT	15132.38	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-12.394;DP=577;FS=0.665;HRun=1;HaplotypeScore=56.0658;InbreedingCoeff=0.9978;MQ=93.03;MQ0=0;MQRankSum=-4.256;QD=41.12;ReadPosRankSum=1.486;VQSLOD=5.3012;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,41:42:99:1798,120,0	1/1:0,13:13:36.12:539,36,0	0/0:28,0:28:71.86:0,72,855	0/0:27,0:27:64.89:0,65,888	1/1:1,17:18:48.16:719,48,0	0/0:30,0:30:90.29:0,90,1167	0/0:34,0:34:99:0,99,1270	1/1:0,19:19:54.18:804,54,0	1/1:0,17:17:51.17:764,51,0	1/1:3,20:23:65.94:927,66,0	1/1:0,9:9:27.05:379,27,0	0/0:19,0:19:57.16:0,57,711	0/0:11,0:11:33.11:0,33,428	1/1:0,22:22:66.22:989,66,0	1/1:0,27:27:72.24:1079,72,0	1/1:0,15:15:42.14:630,42,0	1/1:2,15:17:39.09:552,39,0	1/1:0,19:19:51.13:739,51,0	1/1:1,25:26:75.25:1124,75,0	1/1:0,11:11:33.07:469,33,0	1/1:1,32:33:81.27:1214,81,0	0/0:12,0:12:36.12:0,36,467	0/0:9,0:9:21.07:0,21,273	0/0:39,0:39:99:0,114,1433	1/1:1,7:8:18.06:270,18,0	1/1:0,20:20:60.18:877,60,0	1/1:0,18:18:51.17:765,51,0	1/1:0,11:11:33.11:494,33,0
chr10	59470848	.	TTA	T	479.78	PASS	AB=0.984;AC=16;AF=0.286;AN=56;BaseQRankSum=-7.213;DP=509;FS=4.748;HRun=0;HaplotypeScore=100.4752;InbreedingCoeff=-0.2373;MQ=73.62;MQ0=1;MQRankSum=0.099;QD=1.72;ReadPosRankSum=-9.300;VQSLOD=-0.4714;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:28.09:0,28,317	0/0:7,0:7:10.34:0,10,104	0/0:17,0:16:13.35:0,13,428	0/0:9,0:7:14.88:0,15,157	0/1:25,2:27:41.06:41,0,408	0/0:14,0:14:36.52:0,37,271	0/1:16,0:15:59.37:59,0,180	0/1:25,0:25:64.53:65,0,299	1/1:21,0:21:8.41:133,8,0	0/1:20,0:20:99:113,0,162	0/0:14,0:14:9.18:0,9,178	0/1:19,0:19:27.61:28,0,235	0/0:23,0:23:9.24:0,9,346	0/0:18,0:18:22.99:0,23,271	0/0:17,0:17:18.09:0,18,265	0/0:28,0:28:25.94:0,26,455	0/0:22,0:22:11.25:0,11,331	0/1:17,0:17:3.04:3,0,244	0/1:18,0:18:17.21:17,0,174	0/1:12,1:13:49.62:50,0,166	0/1:11,0:11:27.63:28,0,116	0/1:11,0:11:16.54:17,0,154	0/0:16,0:16:21.76:0,22,263	0/1:14,0:14:8.79:9,0,189	0/0:25,0:25:11.71:0,12,340	0/1:26,0:25:39.98:40,0,285	0/1:29,0:29:28.29:28,0,374	0/1:11,1:12:7.22:7,0,186
chr10	59472452	.	TA	T	4659.81	PASS	AB=0.625;AC=47;AF=0.839;AN=56;BaseQRankSum=-3.304;DP=505;FS=10.354;HRun=14;HaplotypeScore=85.7174;InbreedingCoeff=0.2920;MQ=78.78;MQ0=4;MQRankSum=-2.402;QD=9.96;ReadPosRankSum=4.011;VQSLOD=3.5734;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,0:35:46.78:135,47,0	1/1:0,3:3:5.95:41,6,0	0/0:18,0:16:1.11:0,1,117	0/0:17,0:18:16.09:0,16,183	1/1:2,1:17:19.20:68,19,0	1/1:1,14:16:43.42:285,43,0	1/1:3,11:14:20.74:144,21,0	1/1:14,11:25:22.13:210,22,0	1/1:6,0:18:24.17:69,24,0	1/1:9,16:25:22.69:301,23,0	0/1:4,11:15:13.61:187,0,14	1/1:3,13:16:32.62:226,33,0	0/1:3,8:11:1.07:138,0,1	1/1:8,12:21:34.69:232,35,0	1/1:5,14:21:30.70:197,31,0	1/1:2,13:16:12.86:224,13,0	1/1:6,18:25:52.55:355,53,0	1/1:2,0:21:30.54:88,31,0	1/1:5,10:15:29.63:202,30,0	1/1:6,15:24:16.80:272,17,0	1/1:0,8:9:11.85:82,12,0	0/1:5,7:12:10.04:85,0,10	0/1:7,5:14:12.20:71,0,12	0/1:7,9:16:1.10:138,0,1	1/1:4,14:21:44.74:285,45,0	1/1:9,18:27:43.54:293,44,0	1/1:3,6:9:17.77:123,18,0	1/1:4,12:17:31.75:211,32,0
chr10	59474224	.	AAG	A	3682.43	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=8.011;DP=549;FS=1.208;HRun=0;HaplotypeScore=70.2163;InbreedingCoeff=0.9463;MQ=69.52;MQ0=1;MQRankSum=-1.749;QD=12.07;ReadPosRankSum=-1.398;VQSLOD=3.1936;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:53,3:56:48.07:344,48,0	0/0:10,0:10:27.06:0,27,397	0/0:24,0:15:33.64:0,34,346	0/0:20,0:12:24.75:0,25,279	1/1:4,15:18:27.26:263,27,0	0/0:16,0:16:42.02:0,42,537	0/0:23,0:23:69.20:0,69,993	0/0:28,0:28:68.97:0,69,879	1/1:13,1:14:17.69:143,18,0	1/1:20,2:22:55.31:514,55,0	1/1:15,0:15:32.29:204,32,0	0/0:19,0:19:51.11:0,51,689	0/0:17,0:17:45.12:0,45,625	1/1:17,0:17:16.67:115,17,0	1/1:13,3:15:20.64:185,21,0	1/1:10,0:10:14.49:79,14,0	0/0:29,0:29:60.31:0,60,993	1/1:26,2:28:38.35:317,38,0	1/1:26,4:29:80.76:674,81,0	1/1:7,0:7:4.74:98,5,0	1/1:5,8:13:8.41:149,8,0	0/0:13,0:13:36.54:0,37,500	0/0:12,0:12:33:0,33,437	0/0:33,0:32:91.83:0,92,1258	1/1:14,0:14:5.91:50,6,0	1/1:15,0:15:31.95:233,32,0	1/1:4,13:17:12.53:206,13,0	1/1:12,0:12:17.57:108,18,0
chr10	59474225	.	AG	A	5596.80	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=7.392;DP=546;FS=0.000;HRun=1;HaplotypeScore=55.8332;InbreedingCoeff=0.9772;MQ=69.59;MQ0=1;MQRankSum=-1.636;QD=18.41;ReadPosRankSum=-1.793;VQSLOD=4.3749;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,50:55:50.50:593,51,0	0/0:10,0:10:27.07:0,27,310	0/0:23,0:15:35.13:0,35,290	0/0:20,0:12:19.59:0,20,228	1/1:16,2:17:37.02:292,37,0	0/0:16,0:16:41.90:0,42,425	0/0:23,0:23:69.03:0,69,746	0/0:26,1:27:68.88:0,69,704	1/1:1,13:14:17.97:189,18,0	1/1:16,7:23:68.28:701,68,0	1/1:0,15:15:32.93:355,33,0	0/0:18,1:19:53.89:0,54,534	0/0:17,0:17:44.99:0,45,469	1/1:1,16:17:28.62:336,29,0	1/1:3,13:15:21:236,21,0	1/1:0,10:10:15.05:205,15,0	0/0:28,0:28:40.35:0,40,727	1/1:3,25:28:50.49:612,50,0	1/1:19,11:29:81.78:785,82,0	1/1:7,0:7:19.67:133,20,0	1/1:11,2:13:19.17:171,19,0	0/0:13,0:13:36.93:0,37,389	0/0:13,0:13:32.96:0,33,349	0/0:33,0:32:79.33:0,79,950	1/1:0,14:14:6.02:81,6,0	1/1:7,8:15:41.74:467,42,0	1/1:14,3:17:22.19:193,22,0	1/1:0,12:12:18.06:247,18,0
chr10	59474801	.	TTAAATAAATAAATAAATAAA	T	4158.16	PASS	AC=20;AF=0.526;AN=38;BaseQRankSum=-0.439;DP=154;FS=2.995;HRun=0;HaplotypeScore=68.0620;InbreedingCoeff=0.6505;MQ=35.75;MQ0=20;MQRankSum=-0.439;QD=56.19;ReadPosRankSum=3.735;VQSLOD=2.2645;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:6:12.04:0,12,307	0/0:1,0:1:2.98:0,3,21	./.	./.	0/0:6,0:5:3.01:0,3,55	0/0:1,0:11:9.03:0,9,523	./.	0/0:13,0:8:15.05:0,15,245	0/0:0,0:2:6.01:0,6,62	1/1:2,3:5:9.03:309,9,0	1/1:3,2:4:9.03:232,9,0	0/0:2,0:3:3.01:0,3,167	0/0:4,0:4:3.01:0,3,170	1/1:3,3:4:6.02:321,6,0	1/1:5,0:3:2.96:19,3,0	./.	./.	0/0:3,0:1:2.98:0,3,21	1/1:7,1:5:6.02:264,6,0	1/1:6,6:10:21.07:728,21,0	./.	./.	./.	./.	1/1:4,5:9:10.47:571,10,0	1/1:7,2:9:12.04:432,12,0	1/1:1,5:6:12.04:641,12,0	1/1:5,4:5:12.04:641,12,0
chr10	59477064	.	A	AAAGG	12903.48	PASS	AB=0.846;AC=38;AF=0.679;AN=56;BaseQRankSum=-8.753;DP=562;FS=0.000;HRun=0;HaplotypeScore=119.9302;InbreedingCoeff=0.8097;MQ=59.90;MQ0=5;MQRankSum=-1.231;QD=36.45;ReadPosRankSum=0.175;VQSLOD=4.3021;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:17,15:33:40.22:1264,40,0	1/1:5,3:8:9.03:180,9,0	0/0:41,0:19:26.44:0,26,314	0/0:39,0:19:26.88:0,27,299	1/1:11,10:21:36.12:793,36,0	0/0:36,0:35:54.89:0,55,1290	0/0:17,0:16:33.11:0,33,534	1/1:8,14:15:18.06:301,18,0	1/1:10,9:20:42.14:895,42,0	1/1:8,19:28:57.17:1284,57,0	1/1:7,9:16:29.93:672,30,0	0/0:24,0:24:29.58:0,30,842	0/1:16,0:15:31.47:31,0,518	1/1:4,10:16:33.55:699,34,0	1/1:9,4:14:18.06:359,18,0	1/1:6,8:15:36.56:772,37,0	1/1:17,8:25:39.11:877,39,0	1/1:8,7:15:24.06:527,24,0	0/1:10,7:17:14.71:489,0,15	1/1:6,3:10:18.06:431,18,0	1/1:7,12:19:30.10:720,30,0	0/0:20,0:20:43.51:0,44,695	0/0:9,0:9:21.06:0,21,312	0/0:22,0:21:51.16:0,51,821	1/1:5,11:17:36.08:721,36,0	1/1:7,13:20:41.35:949,41,0	1/1:2,12:14:33.11:792,33,0	1/1:1,3:4:6.02:146,6,0
chr10	59477093	.	A	AAAG	1671.77	PASS	AB=0.890;AC=12;AF=0.214;AN=56;BaseQRankSum=3.378;DP=590;FS=6.649;HRun=0;HaplotypeScore=175.7791;InbreedingCoeff=-0.2810;MQ=47.70;MQ0=13;MQRankSum=-5.547;QD=6.19;ReadPosRankSum=-5.548;VQSLOD=0.6198;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:88.63:0,89,986	0/0:2,0:2:6.02:0,6,90	0/0:26,0:8:21.04:0,21,303	0/0:32,0:6:12.02:0,12,142	0/0:18,0:18:34.33:0,34,374	0/1:29,9:38:99:411,0,932	0/1:16,4:19:99:206,0,305	0/0:26,0:23:54.18:0,54,841	0/0:18,0:18:49.62:0,50,523	0/1:31,0:31:99:106,0,552	0/0:15,0:14:24.06:0,24,337	0/1:19,5:24:99:169,0,699	0/1:12,6:19:99:343,0,327	0/1:18,0:18:99:121,0,290	0/1:21,0:21:99:106,0,395	0/1:28,0:27:99:111,0,607	0/0:22,0:22:53.61:0,54,630	0/0:13,0:13:35.91:0,36,449	0/0:22,0:18:18.42:0,18,538	0/0:9,0:9:27:0,27,305	0/0:17,0:16:28.85:0,29,390	0/1:15,1:16:63.01:63,0,553	0/1:8,4:12:88.47:88,0,248	0/1:19,7:26:79.69:80,0,627	0/1:17,0:17:19.77:20,0,349	0/0:25,0:24:48.69:0,49,720	0/0:23,0:23:59.65:0,60,722	0/0:14,0:14:23.58:0,24,225
chr10	59477110	.	AG	A	2266.92	PASS	AB=0.697;AC=7;AF=0.130;AN=54;BaseQRankSum=-5.368;DP=582;FS=1.560;HRun=2;HaplotypeScore=147.0280;InbreedingCoeff=-0.1557;MQ=46.34;MQ0=12;MQRankSum=3.729;QD=14.91;ReadPosRankSum=0.442;VQSLOD=3.5267;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:81.04:0,81,890	./.	0/0:13,0:7:17.85:0,18,229	0/0:14,5:3:6.02:0,6,78	0/0:17,0:17:45.09:0,45,526	0/1:20,18:38:99:659,0,470	0/1:11,8:18:99:227,0,232	0/0:36,0:33:84.72:0,85,1142	0/0:18,0:18:42.03:0,42,451	0/0:28,0:28:78.12:0,78,929	0/0:10,0:9:14.88:0,15,193	0/1:12,12:24:99:496,0,179	0/1:11,7:18:99:207,0,341	0/0:18,0:18:48.11:0,48,591	0/0:23,0:23:60.63:0,61,790	0/0:27,0:26:75.19:0,75,970	0/0:27,0:27:47.91:0,48,500	0/0:19,0:19:45.06:0,45,530	0/0:24,0:22:61.10:0,61,806	0/0:9,0:9:26.31:0,26,229	0/0:17,0:16:33.05:0,33,424	0/1:3,11:14:90.38:347,0,90	0/1:7,5:12:99:168,0,147	0/1:22,5:27:99:292,0,325	0/0:15,0:15:33.09:0,33,454	0/0:32,0:30:86.63:0,87,1074	0/0:23,0:23:65.45:0,65,786	0/0:17,1:18:16.37:0,16,489
chr10	59478266	.	CTT	C	5178.23	PASS	AB=0.590;AC=34;AF=0.607;AN=56;BaseQRankSum=-10.570;DP=565;FS=1.219;HRun=14;HaplotypeScore=85.3907;InbreedingCoeff=0.5134;MQ=70.36;MQ0=2;MQRankSum=0.138;QD=12.72;ReadPosRankSum=2.624;VQSLOD=4.1402;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:3,1:17:2.01:0,2,63	1/1:0,6:7:17.74:151,18,0	0/0:17,0:14:23.92:0,24,248	0/0:11,0:10:17.06:0,17,198	0/0:10,2:34:3.06:0,3,259	0/1:11,3:33:23.09:23,0,179	0/1:5,4:26:56.47:56,0,122	0/1:10,14:25:5.27:270,0,5	0/0:5,0:20:36.52:0,37,164	1/1:9,13:22:37.61:353,38,0	1/1:2,21:25:50.83:519,51,0	0/0:3,0:11:20.97:0,21,102	0/1:6,2:20:29.68:30,0,43	1/1:3,16:19:39.25:353,39,0	1/1:3,13:18:38.48:327,38,0	1/1:7,15:24:39.93:416,40,0	1/1:2,18:20:44.55:398,45,0	0/1:7,3:26:65.42:65,0,69	1/1:6,5:11:14.94:139,15,0	1/1:2,18:20:44.95:416,45,0	1/1:3,10:15:25.54:217,26,0	0/1:5,1:15:6.78:7,0,73	0/0:4,0:20:28.80:0,29,108	0/0:7,1:25:18.69:0,19,171	1/1:4,11:15:28.42:259,28,0	1/1:9,14:23:38.92:356,39,0	1/1:4,23:27:61.49:581,61,0	1/1:2,9:12:20.88:241,21,0
chr10	59478415	.	TAAG	T	14992.55	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=0.375;DP=517;FS=1.271;HRun=0;HaplotypeScore=121.4028;InbreedingCoeff=0.8596;MQ=74.73;MQ0=3;MQRankSum=-8.775;QD=35.11;ReadPosRankSum=5.245;VQSLOD=5.6666;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,21:21:48.16:798,48,0	1/1:1,6:7:21.07:349,21,0	0/0:39,0:29:61.76:0,62,1423	0/0:48,0:27:34.35:0,34,1131	1/1:0,14:14:27.09:448,27,0	1/1:1,24:25:51.17:849,51,0	1/1:3,25:28:47.68:798,48,0	1/1:2,14:16:42.07:609,42,0	1/1:0,17:17:48.16:798,48,0	1/1:1,24:25:69.62:1019,70,0	1/1:0,19:19:42.14:699,42,0	1/1:0,16:16:27.09:449,27,0	1/1:0,15:15:42.11:669,42,0	1/1:0,22:22:48.16:798,48,0	1/1:1,17:18:39.13:648,39,0	1/1:1,16:17:39.13:649,39,0	1/1:2,16:18:41.88:699,42,0	1/1:0,8:8:15.05:250,15,0	1/1:1,18:19:54.18:876,54,0	1/1:0,14:15:26.89:449,27,0	1/1:2,15:17:20.87:349,21,0	1/1:0,18:18:25.98:448,26,0	1/1:0,6:6:6.02:100,6,0	1/1:3,16:19:29.95:499,30,0	1/1:0,15:15:30.10:499,30,0	1/1:0,15:15:45.11:696,45,0	1/1:0,14:13:30.10:497,30,0	1/1:0,3:3:3.01:50,3,0
chr10	59480342	.	G	GTAAAAAA	5030.96	PASS	AB=1.000;AC=34;AF=0.630;AN=54;BaseQRankSum=4.878;DP=201;FS=0.000;HRun=0;HaplotypeScore=68.1749;InbreedingCoeff=0.6986;MQ=85.68;MQ0=2;MQRankSum=-8.895;QD=52.41;ReadPosRankSum=1.670;VQSLOD=4.6379;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,0:7:15.05:429,15,0	1/1:4,0:4:12.04:348,12,0	0/0:18,0:11:28.02:0,28,512	0/0:20,0:12:26.26:0,26,438	1/1:3,1:9:8.99:158,9,0	0/0:9,0:9:27.02:0,27,636	0/0:15,0:15:39.05:0,39,593	1/1:9,0:9:8.99:570,9,0	1/1:5,0:6:15.05:442,15,0	1/1:1,0:1:3.01:111,3,0	0/1:5,0:5:13.34:88,0,13	0/0:6,0:6:8.11:0,8,238	0/0:10,0:10:21.53:0,22,495	1/1:4,0:3:9.03:199,9,0	0/1:3,0:3:3.56:84,0,4	1/1:6,0:5:9.50:218,10,0	1/1:8,0:8:20.81:531,21,0	1/1:5,0:6:18.06:539,18,0	./.	1/1:1,0:1:3.01:90,3,0	1/1:8,0:7:14.08:194,14,0	0/0:4,0:4:8.80:0,9,242	0/0:7,0:7:15.05:0,15,379	0/0:14,0:14:36.11:0,36,905	1/1:7,0:8:18.06:584,18,0	1/1:4,0:3:6.02:147,6,0	1/1:6,0:5:9.03:219,9,0	1/1:1,0:1:3.01:80,3,0
chr10	59480343	.	G	GTAAAAAAAA	15826.97	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=1.686;DP=284;FS=3.179;HRun=0;HaplotypeScore=99.4906;InbreedingCoeff=0.9159;MQ=74.61;MQ0=1;MQRankSum=-10.122;QD=88.42;ReadPosRankSum=0.220;VQSLOD=5.0745;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,2:13:30.10:1025,30,0	1/1:1,0:4:12.04:382,12,0	0/0:17,0:11:29.47:0,29,524	0/0:21,0:15:26.19:0,26,495	1/1:13,0:13:30.09:948,30,0	0/0:9,0:9:26.98:0,27,743	0/0:15,0:15:39.85:0,40,748	1/1:17,0:21:60.21:2022,60,0	1/1:7,0:10:24.08:1009,24,0	1/1:5,0:5:15.05:577,15,0	1/1:6,0:6:14.71:400,15,0	0/0:6,0:6:7.67:0,8,273	0/0:10,0:10:24.03:0,24,601	1/1:10,0:12:33.11:1122,33,0	1/1:4,0:6:6.30:466,6,0	1/1:6,0:7:18.06:701,18,0	1/1:8,0:12:33.11:1132,33,0	1/1:5,3:8:24.08:1001,24,0	1/1:8,0:7:18.06:725,18,0	1/1:5,1:6:18.06:619,18,0	1/1:7,2:12:23.44:515,23,0	0/0:4,0:4:8.31:0,8,281	0/0:7,0:7:15.05:0,15,448	0/0:14,0:14:39.11:0,39,1100	1/1:9,1:11:30.10:1196,30,0	1/1:6,0:7:17.70:559,18,0	1/1:10,0:12:30.10:1321,30,0	1/1:1,0:1:3.01:109,3,0
chr10	59481000	.	AT	A	11366.14	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-4.777;DP=600;FS=68.663;HRun=9;HaplotypeScore=80.1722;InbreedingCoeff=0.9218;MQ=70.15;MQ0=0;MQRankSum=-5.343;QD=20.30;ReadPosRankSum=5.789;VQSLOD=-0.3192;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,21:28:31.12:426,31,0	1/1:1,12:13:27.01:247,27,0	0/0:22,1:23:48.11:0,48,526	0/0:17,0:17:10.05:0,10,344	1/1:3,14:17:39.01:357,39,0	1/1:3,19:22:53.99:492,54,0	1/1:4,20:24:60.02:549,60,0	1/1:3,18:21:53.99:485,54,0	1/1:5,13:18:33:302,33,0	1/1:2,18:20:51.01:466,51,0	1/1:4,16:21:7.32:323,7,0	1/1:3,26:29:75.01:679,75,0	1/1:10,28:38:65.87:591,66,0	1/1:3,13:16:35.96:321,36,0	1/1:5,21:26:63:576,63,0	1/1:2,14:16:35.96:321,36,0	1/1:3,16:19:44.98:403,45,0	1/1:3,17:20:45.01:411,45,0	1/1:5,17:22:53.99:486,54,0	1/1:10,19:29:23.29:482,23,0	1/1:5,13:18:39:357,39,0	1/1:1,14:15:42.02:384,42,0	1/1:12,14:26:18.97:310,19,0	1/1:1,22:23:66.04:604,66,0	1/1:2,13:15:38.96:357,39,0	1/1:1,20:21:57.01:517,57,0	1/1:6,29:35:86.97:783,87,0	1/1:3,5:8:15.01:137,15,0
chr10	59481896	.	CT	C	1292.41	PASS	AB=0.840;AC=27;AF=0.482;AN=56;BaseQRankSum=2.108;DP=392;FS=1.119;HRun=15;HaplotypeScore=67.6345;InbreedingCoeff=0.3872;MQ=71.32;MQ0=1;MQRankSum=2.276;QD=4.70;ReadPosRankSum=5.478;VQSLOD=1.5094;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,14:24:15.19:166,15,0	0/0:7,0:7:9.90:0,10,69	0/0:14,0:7:10.91:0,11,67	0/1:10,1:8:0:0,0,0	1/1:9,10:21:33.36:200,33,0	1/1:5,8:12:20.63:134,21,0	0/1:5,5:12:20.94:63,0,21	0/1:22,4:29:7.51:8,0,255	1/1:5,7:12:20.66:134,21,0	0/0:18,0:18:28.04:0,28,225	0/0:9,0:9:14.95:0,15,124	1/1:3,9:12:14.73:96,15,0	1/1:5,9:14:23.55:153,24,0	0/0:6,0:6:8.96:0,9,72	0/0:8,0:8:11.97:0,12,99	0/0:12,0:12:32.18:0,32,261	0/1:22,2:24:9.63:10,0,283	1/1:9,10:22:6.27:145,6,0	0/1:15,1:16:5.50:6,0,185	0/1:13,1:14:2.73:3,0,88	0/1:8,1:9:7.31:7,0,60	1/1:3,2:5:2.93:19,3,0	1/1:4,14:18:32.01:210,32,0	0/1:6,7:13:5.85:95,0,6	0/0:15,0:20:28.03:0,28,233	0/0:9,0:9:1.71:0,2,124	0/0:14,0:13:14.22:0,14,152	0/1:4,2:6:17.50:29,0,18
chr10	59484131	.	CT	C	3068.21	PASS	AB=0.692;AC=23;AF=0.411;AN=56;BaseQRankSum=6.600;DP=524;FS=10.989;HRun=10;HaplotypeScore=63.9374;InbreedingCoeff=0.8661;MQ=80.48;MQ0=17;MQRankSum=0.567;QD=15.82;ReadPosRankSum=2.695;VQSLOD=3.3602;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:21:48.09:0,48,517	0/0:5,0:5:12.03:0,12,133	0/0:35,1:19:3.03:0,3,206	0/0:47,1:27:38.57:0,39,357	0/0:20,1:21:28.09:0,28,535	0/0:14,0:13:32.87:0,33,338	0/0:22,1:22:33.84:0,34,578	0/0:33,0:33:82.09:0,82,815	0/0:9,0:9:21.06:0,21,232	1/1:4,18:22:50.97:441,51,0	1/1:2,15:17:38.99:339,39,0	0/0:13,0:13:33.09:0,33,365	0/0:15,0:13:32.66:0,33,348	1/1:2,11:12:26.99:234,27,0	1/1:4,14:19:38.02:319,38,0	1/1:2,9:10:21:182,21,0	0/0:42,0:41:99:0,99,1095	0/0:18,1:16:4.03:0,4,272	1/1:11,16:27:14.78:353,15,0	0/1:5,4:9:18.11:89,0,18	1/1:3,6:8:12:104,12,0	0/0:9,0:9:21:0,21,210	0/0:8,0:7:15.03:0,15,158	0/0:11,0:10:24.06:0,24,265	1/1:4,7:10:20.99:182,21,0	1/1:2,16:18:23.81:367,24,0	1/1:2,22:23:50.99:442,51,0	1/1:5,9:14:26.97:234,27,0
chr10	59488470	.	A	ACCAAT	5203.68	PASS	AB=1.000;AC=16;AF=0.286;AN=56;BaseQRankSum=-5.760;DP=670;FS=7.176;HRun=0;HaplotypeScore=122.0364;InbreedingCoeff=0.8156;MQ=70.94;MQ0=6;MQRankSum=-2.680;QD=29.40;ReadPosRankSum=2.492;VQSLOD=4.3798;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:92.87:0,93,1399	0/1:16,0:16:5.22:5,0,253	0/0:40,0:30:71.29:0,71,905	0/0:40,0:34:50:0,50,747	0/0:17,0:17:45.05:0,45,642	1/1:1,22:25:21.07:612,21,0	1/1:0,17:18:21.07:645,21,0	0/0:50,0:44:78.68:0,79,789	0/0:23,0:23:63.13:0,63,1060	0/0:28,0:28:78.15:0,78,1192	0/0:18,0:18:45.13:0,45,854	1/1:2,17:20:30.10:906,30,0	1/1:0,27:28:60.04:1743,60,0	0/0:14,0:14:42.08:0,42,661	0/0:27,0:27:78.15:0,78,1405	0/0:37,0:37:99:0,108,1703	0/1:18,0:17:19.35:19,0,214	0/0:20,0:20:51.09:0,51,927	0/0:21,0:20:60.03:0,60,835	0/0:27,0:27:72.03:0,72,1014	0/0:21,0:21:62.86:0,63,985	1/1:3,16:19:18.06:500,18,0	1/1:1,12:15:10.66:206,11,0	1/1:3,14:18:16.03:567,16,0	0/0:15,0:15:43.27:0,43,615	0/0:28,0:28:78.16:0,78,1229	0/0:32,0:32:89.99:0,90,1493	0/0:2,0:2:6:0,6,51
chr10	59492175	.	G	GAA	14124.47	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-3.781;DP=592;FS=8.812;HRun=10;HaplotypeScore=124.5308;InbreedingCoeff=0.9535;MQ=69.26;MQ0=0;MQRankSum=-4.371;QD=25.87;ReadPosRankSum=1.077;VQSLOD=3.6386;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,24:32:59.63:799,60,0	1/1:2,4:7:11.53:143,12,0	0/0:24,0:20:26.96:0,27,280	0/0:21,0:18:21.32:0,21,259	1/1:3,14:19:40.76:448,41,0	1/1:5,7:12:12.88:156,13,0	1/1:3,15:19:41.58:548,42,0	1/1:16,21:38:74.68:1006,75,0	1/1:8,17:25:48.08:660,48,0	1/1:9,5:14:33.05:414,33,0	1/1:6,14:20:39:506,39,0	1/1:7,10:18:46.01:609,46,0	1/1:6,12:18:28.87:384,29,0	1/1:3,12:17:21.04:289,21,0	1/1:3,24:28:50.54:676,51,0	1/1:7,12:21:38.55:482,39,0	1/1:7,13:20:36.12:536,36,0	1/1:4,14:18:39.13:582,39,0	1/1:7,9:17:47.60:590,48,0	1/1:9,9:21:13.55:434,14,0	1/1:3,14:19:38.57:514,39,0	1/1:1,11:13:26.92:303,27,0	1/1:10,6:16:42.91:500,43,0	1/1:7,10:22:37.57:439,38,0	1/1:12,14:28:59.65:771,60,0	1/1:7,18:27:59.99:669,60,0	1/1:5,24:33:66.97:884,67,0	1/1:3,18:24:56.66:782,57,0
chr10	59492853	.	CGCAGAGGCAGAGGCTGAGGCAGAGGCAGAG	C	9892.94	PASS	AC=30;AF=0.556;AN=54;BaseQRankSum=13.786;DP=597;FS=2.422;HRun=0;HaplotypeScore=364.1999;InbreedingCoeff=0.8799;MQ=81.10;MQ0=1;MQRankSum=1.385;QD=32.12;ReadPosRankSum=0.676;VQSLOD=2.7080;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:4,29:33:3.01:236,3,0	0/0:7,0:7:21.04:0,21,1742	0/0:28,0:23:51.13:0,51,971	0/0:23,0:18:28.66:0,29,974	1/1:0,28:28:56.80:1352,57,0	0/0:23,0:23:60.21:0,60,4836	0/0:24,0:24:60.18:0,60,4022	0/0:31,0:30:87.27:0,87,3280	1/1:1,18:19:3.48:237,3,0	1/1:3,21:24:37.12:1392,37,0	1/1:0,11:11:14.87:292,15,0	0/0:23,0:23:57.17:0,57,5514	0/0:21,0:21:57.15:0,57,4735	1/1:2,14:16:3.01:236,3,0	1/1:1,19:20:6.02:471,6,0	1/1:3,26:29:8.32:476,8,0	0/0:23,0:23:69.10:0,69,6292	1/1:8,0:8:20.99:240,21,0	1/1:5,9:12:24.07:482,24,0	1/1:4,29:33:53.79:1090,54,0	1/1:9,0:9:14.46:208,14,0	0/0:23,0:23:63.15:0,63,4578	0/0:23,0:23:69.20:0,69,4563	0/0:33,0:33:99:0,99,8607	1/1:1,16:17:6.02:471,6,0	1/1:2,25:27:66.19:1532,66,0	1/1:1,19:20:15.99:1180,16,0	./.
chr10	59492879	.	CAGAG	C	1032.05	PASS	AB=0.881;AC=24;AF=0.444;AN=54;BaseQRankSum=9.312;DP=594;FS=28.273;HRun=0;HaplotypeScore=143.4408;InbreedingCoeff=0.3822;MQ=58.30;MQ0=29;MQRankSum=-6.683;QD=3.51;ReadPosRankSum=3.264;VQSLOD=0.8225;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:29:3.01:30,3,0	0/0:6,0:6:18.06:0,18,477	0/0:40,0:9:23.86:0,24,334	0/0:34,0:14:36.45:0,36,640	0/1:28,0:28:55.72:56,0,161	0/0:22,0:22:66.23:0,66,1682	0/0:20,0:20:60.18:0,60,1448	0/0:36,0:36:99:0,102,2209	1/1:18,0:18:3.01:32,3,0	0/1:23,0:21:30.52:182,0,31	1/1:11,0:11:3.01:62,3,0	0/0:23,0:23:69.24:0,69,1700	0/0:19,0:19:57.16:0,57,1443	1/1:14,0:14:3.01:30,3,0	1/1:19,0:19:6.01:60,6,0	1/1:26,0:26:5.75:60,6,0	0/0:23,0:22:66.23:0,66,1798	0/1:3,2:5:85.45:95,0,85	0/1:14,0:8:42.84:43,0,99	1/1:29,0:29:11.96:108,12,0	0/1:4,12:16:26.31:49,0,26	0/0:21,0:19:54.18:0,54,1378	0/0:19,0:19:54.17:0,54,1384	0/0:30,0:30:90.31:0,90,2413	1/1:18,0:16:6.01:60,6,0	0/1:25,0:25:99:197,0,210	1/1:19,0:19:14.76:150,15,0	./.
chr10	59497024	.	CG	C	6727.58	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=13.173;DP=467;FS=0.356;HRun=3;HaplotypeScore=56.8008;InbreedingCoeff=0.9974;MQ=93.80;MQ0=0;MQRankSum=-0.905;QD=33.81;ReadPosRankSum=0.516;VQSLOD=5.1125;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:51.17:0,51,734	0/0:6,0:6:18.06:0,18,258	0/0:17,0:17:47.34:0,47,630	0/0:25,0:25:66.69:0,67,930	0/0:13,0:13:39.13:0,39,559	0/0:22,0:22:63.16:0,63,829	0/0:26,0:26:78.24:0,78,1088	0/0:20,0:20:60.20:0,60,863	0/0:13,0:13:39.12:0,39,541	1/1:2,14:16:42.12:507,42,0	1/1:0,6:6:18.06:223,18,0	0/0:12,0:12:33.11:0,33,474	0/0:12,0:12:36.12:0,36,518	1/1:0,18:18:54.17:669,54,0	1/1:3,23:26:69.21:844,69,0	1/1:3,19:22:57.18:703,57,0	0/0:21,0:21:63.21:0,63,906	0/0:24,0:24:69.22:0,69,973	1/1:0,16:16:45.13:545,45,0	1/1:0,12:12:33.10:409,33,0	1/1:1,20:21:54.17:668,54,0	0/0:13,0:12:30.10:0,30,432	0/0:11,0:11:30.09:0,30,414	0/0:15,0:15:42.14:0,42,604	1/1:1,12:13:39.12:483,39,0	1/1:3,19:22:57.12:673,57,0	1/1:0,17:17:51.16:632,51,0	1/1:0,10:10:30.09:372,30,0
chr10	59497027	.	GT	G	2048.55	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=16.592;DP=464;FS=0.734;HRun=1;HaplotypeScore=71.0629;InbreedingCoeff=0.9401;MQ=95.52;MQ0=0;MQRankSum=-2.432;QD=10.45;ReadPosRankSum=1.590;VQSLOD=1.5231;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:51.17:0,51,815	0/0:7,0:7:21.06:0,21,287	0/0:19,0:19:53.96:0,54,791	0/0:25,0:25:61.77:0,62,1048	0/0:14,0:14:42.13:0,42,647	0/0:21,0:21:60.16:0,60,894	0/0:26,0:26:72.24:0,72,1103	0/0:22,0:22:66.21:0,66,1005	0/0:13,0:13:36.10:0,36,549	1/1:14,0:14:30.65:110,31,0	1/1:6,0:6:16.47:73,16,0	0/0:12,0:12:36.11:0,36,538	0/0:12,0:12:36.12:0,36,566	1/1:18,0:18:50.44:253,50,0	1/1:23,3:26:64.90:386,65,0	1/1:19,2:21:53.47:317,53,0	0/0:21,0:21:63.21:0,63,1005	0/0:23,0:23:66.22:0,66,1037	1/1:16,0:16:34.97:131,35,0	1/1:12,0:12:15.44:125,15,0	1/1:22,0:22:30.84:225,31,0	0/0:10,0:10:30.10:0,30,479	0/0:10,0:10:30.10:0,30,476	0/0:15,0:15:45.14:0,45,684	1/1:12,1:13:35.94:181,36,0	0/1:21,0:21:4.77:117,0,5	1/1:17,0:17:47.06:221,47,0	1/1:10,0:10:27.98:133,28,0
chr10	59499815	.	T	TA	4805.54	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-12.998;DP=535;FS=1.303;HRun=1;HaplotypeScore=54.9695;InbreedingCoeff=0.9979;MQ=77.51;MQ0=1;MQRankSum=-0.577;QD=39.07;ReadPosRankSum=3.018;VQSLOD=5.4170;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:66.17:0,66,824	0/0:8,0:8:24.08:0,24,311	0/0:12,0:12:33.11:0,33,428	0/0:13,0:13:36.11:0,36,457	0/0:38,0:38:99:0,108,1387	1/1:1,25:26:66.22:989,66,0	1/1:0,7:7:21.07:315,21,0	0/0:30,0:30:87.28:0,87,1130	0/0:19,0:19:54.18:0,54,701	0/0:20,0:20:60.20:0,60,779	0/0:20,0:20:60.18:0,60,753	1/1:1,25:26:69.23:1034,69,0	1/1:2,18:19:47.95:717,48,0	0/0:26,0:26:75.23:0,75,960	0/0:26,0:26:78.23:0,78,982	0/0:18,0:18:54.18:0,54,700	0/0:17,0:17:51.15:0,51,648	0/0:12,0:12:33.11:0,33,428	0/0:14,0:14:39.11:0,39,492	0/0:29,0:29:87.27:0,87,1115	0/0:17,0:17:48.15:0,48,610	1/1:0,15:15:39.13:584,39,0	1/1:0,15:15:42.14:628,42,0	1/1:1,13:14:36.12:539,36,0	0/0:11,0:11:33.11:0,33,428	0/0:21,0:21:63.20:0,63,807	0/0:28,0:28:84.22:0,84,1036	0/0:8,0:8:21.07:0,21,273
chr10	59501571	.	G	GCCC	1434.29	PASS	AB=0.748;AC=7;AF=0.125;AN=56;BaseQRankSum=8.037;DP=439;FS=22.804;HRun=0;HaplotypeScore=68.0548;InbreedingCoeff=-0.1434;MQ=62.85;MQ0=7;MQRankSum=-7.950;QD=23.51;ReadPosRankSum=-1.523;VQSLOD=1.5576;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,111,1870	0/0:11,0:11:33.11:0,33,615	0/0:13,0:11:27.09:0,27,478	0/0:19,0:7:18.06:0,18,322	0/0:17,0:17:51.16:0,51,896	0/1:8,2:10:99:270,0,160	0/1:6,3:8:99:194,0,202	0/0:34,0:32:96.27:0,96,1628	0/0:11,0:11:33.11:0,33,613	0/0:21,0:21:63.22:0,63,1172	0/0:17,0:17:48.15:0,48,865	0/1:7,4:12:99:310,0,143	0/1:6,3:10:99:185,0,253	0/0:15,0:15:45.11:0,45,746	0/0:18,0:18:54.14:0,54,969	0/0:14,0:14:42.14:0,42,783	0/0:30,0:30:90.29:0,90,1645	0/0:18,0:18:45.13:0,45,805	0/0:19,0:18:54.18:0,54,975	0/0:14,0:14:42.13:0,42,752	0/0:15,0:15:42.09:0,42,716	0/1:2,4:6:38.06:343,0,38	0/1:3,3:6:96.53:202,0,97	0/1:7,0:7:61.49:61,0,123	0/0:10,0:10:30.08:0,30,497	0/0:18,0:18:54.18:0,54,974	0/0:15,0:15:45.15:0,45,839	0/0:8,0:8:24.08:0,24,447
chr10	59501711	.	A	AG	2171.09	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=-1.215;DP=538;FS=9.893;HRun=1;HaplotypeScore=75.3573;InbreedingCoeff=0.2015;MQ=59.35;MQ0=11;MQRankSum=1.466;QD=7.78;ReadPosRankSum=5.163;VQSLOD=0.2797;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:41,0:41:32.14:32,0,108	1/1:2,2:4:9.85:108,10,0	0/0:37,1:10:16.95:0,17,140	0/0:23,0:8:17.40:0,17,115	0/1:26,0:25:7.37:7,0,126	0/0:12,0:12:14.44:0,14,58	0/0:13,0:13:9.34:0,9,45	1/1:6,22:29:75.45:878,75,0	0/1:16,0:16:19.86:20,0,31	0/0:30,0:29:5.56:0,6,223	0/0:13,0:14:5.54:0,6,123	0/0:15,0:15:21.82:0,22,125	0/0:12,0:11:13.71:0,14,71	0/1:12,0:12:6.37:6,0,19	0/1:22,0:21:15.51:16,0,50	1/1:23,0:22:16.59:43,17,0	1/1:0,36:35:84.20:1179,84,0	0/1:21,0:21:24.05:24,0,91	0/0:19,0:17:17.96:0,18,221	0/1:16,0:15:4.14:4,0,89	0/1:12,0:12:1.64:2,0,49	0/0:4,0:4:5.12:0,5,46	0/0:8,0:8:10.29:0,10,66	0/0:15,0:14:29.77:0,30,146	0/0:20,0:19:9.76:0,10,186	0/0:25,0:25:13.48:0,13,185	0/1:21,0:21:22.35:22,0,31	0/0:11,0:11:1.74:0,2,25
chr10	59501712	.	G	GA	6112.18	PASS	AB=0.858;AC=49;AF=0.875;AN=56;BaseQRankSum=-4.582;DP=549;FS=5.372;HRun=12;HaplotypeScore=65.8613;InbreedingCoeff=0.1608;MQ=59.31;MQ0=10;MQRankSum=-1.465;QD=11.60;ReadPosRankSum=1.430;VQSLOD=4.6091;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,35:42:28.30:598,28,0	0/1:4,0:4:12.84:32,0,13	0/1:36,0:10:3.60:4,0,37	0/0:21,0:7:7.36:0,7,33	1/1:15,10:26:41.01:401,41,0	1/1:4,0:14:14.68:72,15,0	1/1:1,1:13:16.55:92,17,0	0/1:29,0:30:11.26:250,0,11	1/1:2,13:15:24.02:227,24,0	1/1:9,23:31:54.05:512,54,0	0/1:6,8:14:3.41:128,0,3	1/1:3,1:16:14.20:71,14,0	1/1:2,0:10:11.25:57,11,0	1/1:5,10:15:21.38:191,21,0	1/1:4,19:22:36.06:350,36,0	1/1:3,21:23:51.08:497,51,0	1/1:36,0:35:79.79:551,80,0	1/1:9,9:20:5.76:336,6,0	0/1:7,8:17:15.81:222,0,16	1/1:5,10:15:21.03:204,21,0	1/1:5,9:14:15.02:146,15,0	1/1:2,0:4:2.96:19,3,0	1/1:4,0:10:5.68:28,6,0	1/1:5,0:14:25.57:128,26,0	1/1:9,11:19:2.17:183,2,0	1/1:7,16:25:32.27:410,32,0	1/1:2,18:20:35.79:331,36,0	1/1:2,9:11:8.85:73,9,0
chr10	59502103	.	C	CACTT	5838.91	PASS	AB=0.842;AC=41;AF=0.788;AN=52;BaseQRankSum=6.929;DP=271;FS=5.336;HRun=0;HaplotypeScore=141.6493;InbreedingCoeff=0.1447;MQ=53.71;MQ0=8;MQRankSum=-1.789;QD=27.28;ReadPosRankSum=6.482;VQSLOD=4.2431;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,12:22:7.26:792,7,0	./.	0/0:35,0:17:37.92:0,38,713	0/0:20,0:9:24.08:0,24,465	0/1:8,8:13:78.42:382,0,78	1/1:12,0:11:18.71:260,19,0	0/1:11,0:9:47.68:165,0,48	1/1:6,0:5:12.51:206,13,0	0/1:2,7:9:3.35:367,0,3	1/1:7,0:7:15.05:209,15,0	1/1:2,0:2:3.01:59,3,0	1/1:7,0:7:18.06:271,18,0	1/1:5,0:5:12.04:170,12,0	1/1:6,0:6:16.86:203,17,0	0/1:11,0:10:0:266,0,0	1/1:16,0:16:31.61:431,32,0	1/1:15,0:15:33.10:449,33,0	0/1:2,2:4:17.99:132,0,18	1/1:6,0:5:12.48:154,12,0	1/1:2,0:1:3.01:58,3,0	1/1:5,0:5:6.02:133,6,0	./.	1/1:4,0:3:5.72:57,6,0	1/1:10,0:10:14.90:225,15,0	1/1:3,0:3:3.01:58,3,0	0/1:13,0:13:35.64:261,0,36	1/1:15,0:15:7.08:393,7,0	0/1:6,0:6:2.01:139,0,2
chr10	59502104	.	GT	G	1669.85	PASS	AB=0.667;AC=37;AF=0.841;AN=44;BaseQRankSum=4.606;DP=212;FS=16.476;HRun=1;HaplotypeScore=81.7480;InbreedingCoeff=0.5866;MQ=58.74;MQ0=8;MQRankSum=-1.006;QD=11.93;ReadPosRankSum=3.412;VQSLOD=0.7791;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,10:21:35.77:294,36,0	./.	0/0:35,0:17:44.81:0,45,596	0/0:23,0:10:27.09:0,27,399	1/1:1,7:13:29.70:274,30,0	1/1:0,3:6:13.71:113,14,0	1/1:0,3:5:8.24:90,8,0	./.	1/1:0,2:9:17.75:136,18,0	1/1:0,2:3:2.74:12,3,0	0/1:1,1:2:0:0,0,0	1/1:0,2:4:6.79:52,7,0	1/1:0,0:4:5.59:16,6,0	1/1:0,2:5:8.70:58,9,0	1/1:0,1:7:12.77:70,13,0	1/1:0,6:12:17.70:89,18,0	1/1:1,1:8:4.26:39,4,0	1/1:0,2:4:11.97:113,12,0	1/1:0,3:2:6.02:84,6,0	./.	./.	./.	1/1:2,0:2:1.51:7,2,0	0/0:0,5:6:0.47:0,0,1	./.	1/1:0,5:6:14.72:178,15,0	1/1:0,4:14:21.41:164,21,0	1/1:2,0:3:0.89:2,1,0
chr10	59502105	.	T	TTGCCTAGCAAGCG	16305.31	PASS	AB=1.000;AC=41;AF=0.891;AN=46;BaseQRankSum=0.400;DP=287;FS=15.349;HRun=0;HaplotypeScore=112.2908;InbreedingCoeff=0.3899;MQ=54.75;MQ0=8;MQRankSum=0.338;QD=68.22;ReadPosRankSum=3.555;VQSLOD=3.8043;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:22:51.18:2833,51,0	./.	0/1:36,0:17:23.17:23,0,1212	0/0:24,0:10:27.09:0,27,869	1/1:8,0:13:36.07:1595,36,0	1/1:7,4:10:15.05:891,15,0	1/1:3,4:5:9.03:410,9,0	./.	1/1:2,0:9:24.08:1201,24,0	1/1:4,1:5:3.01:186,3,0	0/1:5,0:5:0:0,0,0	1/1:5,2:7:9.03:537,9,0	1/1:3,4:7:9.03:533,9,0	1/1:4,3:7:15.05:870,15,0	1/1:2,7:8:17.83:936,18,0	1/1:13,5:19:24.08:1344,24,0	1/1:6,6:12:12.04:576,12,0	1/1:3,0:5:15.01:605,15,0	1/1:5,0:4:6.02:363,6,0	./.	0/1:6,0:6:0:0,0,0	./.	1/1:5,1:5:2.28:181,2,0	1/1:13,1:14:8.24:518,8,0	./.	1/1:9,1:10:18.02:691,18,0	1/1:6,10:16:35.89:1836,36,0	1/1:3,1:4:3.01:175,3,0
chr10	59502143	.	AC	A	1014.75	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=3.563;DP=389;FS=0.000;HRun=1;HaplotypeScore=73.5013;InbreedingCoeff=0.9190;MQ=73.63;MQ0=4;MQRankSum=-3.613;QD=23.06;ReadPosRankSum=-2.536;VQSLOD=2.8864;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:25:59.85:0,60,692	1/1:0,2:2:6.02:80,6,0	0/0:38,0:16:33.70:0,34,323	0/0:27,0:13:10.87:0,11,124	0/0:19,0:17:47.90:0,48,542	0/0:13,0:13:36.09:0,36,447	0/0:9,0:9:24.08:0,24,316	1/1:9,15:23:59.99:660,60,0	0/0:12,0:12:32.70:0,33,364	0/0:12,0:12:36.10:0,36,462	0/0:8,0:8:23.77:0,24,255	0/0:7,0:7:18.04:0,18,219	0/0:10,0:10:21.03:0,21,264	0/0:10,0:10:27.07:0,27,337	0/0:8,0:8:14.93:0,15,197	0/0:19,0:19:48.90:0,49,615	1/1:8,10:18:38.86:409,39,0	0/0:8,0:8:21.05:0,21,251	0/0:13,0:12:33.06:0,33,396	0/0:17,0:16:48.03:0,48,552	0/0:9,0:9:24.01:0,24,291	0/0:8,0:7:17.99:0,18,216	0/0:5,0:5:14.90:0,15,154	0/0:11,0:11:26.02:0,26,297	0/0:11,0:11:26.84:0,27,276	0/0:21,0:21:63.15:0,63,786	0/0:19,0:19:44.95:0,45,534	0/0:5,0:5:14.98:0,15,161
chr10	59502150	.	G	GAA	945.44	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=4.079;DP=406;FS=0.723;HRun=11;HaplotypeScore=79.0167;InbreedingCoeff=0.8512;MQ=75.53;MQ0=3;MQRankSum=-1.115;QD=18.18;ReadPosRankSum=-3.090;VQSLOD=2.1530;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:25:53.48:0,53,481	1/1:0,2:2:6.02:87,6,0	0/0:37,0:19:22.26:0,22,156	0/0:30,0:17:3.97:0,4,94	0/0:19,0:18:38.99:0,39,369	0/0:11,0:11:27.01:0,27,255	0/0:9,0:9:21.02:0,21,204	1/1:18,9:29:41.64:489,42,0	0/0:11,0:12:32.79:0,33,303	0/0:15,0:15:42.06:0,42,407	0/0:5,0:8:14.29:0,14,159	0/0:6,0:6:15.02:0,15,145	0/0:8,0:9:14.72:0,15,128	0/0:11,0:11:30.05:0,30,290	0/0:8,0:8:14.91:0,15,145	0/0:18,0:19:53.79:0,54,506	1/1:4,15:20:38.57:503,39,0	0/0:8,0:8:18.02:0,18,175	0/0:15,0:15:45.07:0,45,436	0/0:14,0:16:47.56:0,48,431	0/0:9,0:9:21:0,21,195	0/0:8,0:7:21.03:0,21,202	0/0:3,0:4:9.01:0,9,87	0/0:9,0:9:24.04:0,24,233	0/0:10,0:10:21.02:0,21,204	0/0:21,0:21:63.09:0,63,605	0/0:21,0:21:32.72:0,33,313	0/0:7,0:8:11.96:0,12,166
chr10	59502274	.	CTA	C	7482.83	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=10.656;DP=372;FS=1.359;HRun=0;HaplotypeScore=49.5053;InbreedingCoeff=0.9406;MQ=69.65;MQ0=2;MQRankSum=-0.792;QD=41.57;ReadPosRankSum=3.317;VQSLOD=6.6092;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:54.16:0,54,979	0/0:2,0:2:3.01:0,3,57	0/0:5,0:6:6.02:0,6,115	0/0:6,0:7:20.89:0,21,254	0/0:28,0:28:78.20:0,78,1359	0/0:16,0:16:42.14:0,42,803	0/0:7,0:7:21.07:0,21,379	0/0:23,0:23:66.20:0,66,1225	0/0:8,0:8:24.08:0,24,459	1/1:0,24:24:72.22:1060,72,0	1/1:1,20:21:60.20:918,60,0	0/0:6,0:6:15.05:0,15,287	0/0:7,0:7:18.06:0,18,344	1/1:0,11:11:24.08:367,24,0	1/1:0,12:12:33.11:505,33,0	1/1:0,10:10:30.10:459,30,0	0/0:16,0:16:39.03:0,39,701	0/0:18,0:18:48.16:0,48,917	1/1:0,15:15:45.15:688,45,0	1/1:0,20:20:57.19:872,57,0	1/1:0,3:3:6.02:92,6,0	0/0:10,0:10:30.10:0,30,574	0/0:12,0:12:36.11:0,36,651	0/0:8,0:8:24.08:0,24,459	1/1:1,14:15:42.14:643,42,0	1/1:0,17:17:51.17:778,51,0	1/1:1,24:23:51.17:780,51,0	1/1:0,7:7:21.07:321,21,0
chr10	59504086	.	G	GAA	11758.57	PASS	AB=0.609;AC=49;AF=0.875;AN=56;BaseQRankSum=-6.304;DP=643;FS=9.418;HRun=10;HaplotypeScore=89.3862;InbreedingCoeff=0.5170;MQ=66.01;MQ0=15;MQRankSum=-0.918;QD=20.81;ReadPosRankSum=4.040;VQSLOD=3.3725;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,1:26:20.89:183,21,0	1/1:0,6:6:15.05:223,15,0	0/0:41,0:26:61.70:0,62,471	0/0:35,0:13:9.07:0,9,128	1/1:9,0:33:30.10:181,30,0	1/1:1,0:18:34.81:123,35,0	0/1:4,0:19:3.74:70,0,4	1/1:17,19:38:62.68:871,63,0	1/1:4,1:16:30.42:116,30,0	1/1:6,22:31:78.11:997,78,0	1/1:6,22:31:74.17:1003,74,0	1/1:6,1:24:7.48:125,7,0	1/1:4,0:15:25.70:92,26,0	1/1:5,12:17:31.35:451,31,0	1/1:5,19:28:52.63:681,53,0	1/1:2,17:22:52.63:681,53,0	1/1:5,15:21:41.63:590,42,0	0/1:6,0:16:7.67:47,0,8	1/1:9,12:21:41.06:507,41,0	1/1:5,20:29:67.24:845,67,0	1/1:1,14:15:39.13:581,39,0	0/1:7,0:15:10.14:41,0,10	1/1:2,0:15:29.70:105,30,0	1/1:1,0:7:14.97:53,15,0	1/1:5,19:24:69.12:957,69,0	1/1:3,23:31:75.66:939,76,0	1/1:10,16:27:41.13:891,41,0	1/1:4,8:15:32.08:404,32,0
chr10	59507151	.	A	ATT	12093.60	PASS	AB=0.833;AC=25;AF=0.446;AN=56;BaseQRankSum=-16.182;DP=597;FS=9.396;HRun=3;HaplotypeScore=61.7041;InbreedingCoeff=0.9257;MQ=75.57;MQ0=3;MQRankSum=-1.075;QD=47.99;ReadPosRankSum=1.468;VQSLOD=3.3975;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,120,1643	0/1:4,1:5:42.98:43,0,114	0/0:23,0:24:25.88:0,26,688	0/0:18,0:17:33.58:0,34,572	0/0:34,0:34:99:0,102,1428	0/0:22,0:22:66.22:0,66,924	0/0:14,0:14:42.14:0,42,588	0/0:39,0:39:99:0,111,1493	0/0:13,0:13:36.11:0,36,486	1/1:0,18:18:51.17:915,51,0	1/1:0,18:18:54.14:951,54,0	0/0:25,0:25:75.24:0,75,1033	0/0:20,0:20:57.19:0,57,797	1/1:0,11:11:27.09:495,27,0	1/1:0,25:25:69.24:1266,69,0	1/1:0,28:28:81.28:1486,81,0	0/0:18,0:18:54.16:0,54,736	0/0:18,0:18:48.16:0,48,669	1/1:1,20:21:60.19:1071,60,0	1/1:1,32:34:90.27:1586,90,0	1/1:0,8:8:21.07:385,21,0	0/0:21,0:21:63.21:0,63,881	0/0:20,0:20:57.15:0,57,776	0/0:18,0:18:48.16:0,48,670	1/1:0,23:23:66.23:1210,66,0	1/1:2,23:24:63.22:1147,63,0	1/1:3,22:25:66.23:1210,66,0	1/1:0,9:9:18.06:328,18,0
chr10	59508338	.	TCATG	T	2184.91	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.005;DP=643;FS=3.693;HRun=0;HaplotypeScore=103.8531;InbreedingCoeff=0.9954;MQ=85.10;MQ0=0;MQRankSum=-4.514;QD=42.84;ReadPosRankSum=-2.390;VQSLOD=3.6530;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,102,2712	1/1:0,8:8:24.08:478,24,0	0/0:28,0:28:67.61:0,68,1563	0/0:20,0:20:51.15:0,51,1360	0/0:22,0:22:66.23:0,66,1822	0/0:29,0:29:84.29:0,84,2275	0/0:28,0:28:84.27:0,84,2254	1/1:1,25:26:72.17:1252,72,0	0/0:16,0:16:48.12:0,48,1129	0/0:19,0:19:57.18:0,57,1483	0/0:26,0:26:78.20:0,78,1841	0/0:16,0:16:48.16:0,48,1284	0/0:35,0:35:99:0,99,2743	0/0:16,0:16:48.16:0,48,1330	0/0:25,0:25:75.26:0,75,2085	0/0:30,0:30:87.26:0,87,2248	1/1:0,17:17:29.61:597,30,0	0/0:13,0:13:19.12:0,19,790	0/0:25,0:25:69.23:0,69,1814	0/0:25,0:25:75.24:0,75,2007	0/0:28,0:28:81.24:0,81,2093	0/0:34,0:34:99:0,102,2805	0/0:26,0:26:78.27:0,78,2181	0/0:20,0:20:60.21:0,60,1666	0/0:17,0:17:51.16:0,51,1368	0/0:28,0:28:81.25:0,81,2089	0/0:23,0:22:69.22:0,69,1794	0/0:7,0:7:21.07:0,21,587
chr10	59508580	.	CT	C	1154.28	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=7.724;DP=680;FS=9.962;HRun=9;HaplotypeScore=69.5020;InbreedingCoeff=0.9812;MQ=69.60;MQ0=4;MQRankSum=0.008;QD=20.25;ReadPosRankSum=-3.099;VQSLOD=2.5789;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,1:26:42.52:0,43,718	1/1:1,8:10:21.01:192,21,0	0/0:60,0:28:52.84:0,53,574	0/0:55,0:20:29.72:0,30,314	0/0:27,0:27:69.19:0,69,785	0/0:24,2:27:20.11:0,20,712	0/0:9,0:9:27.08:0,27,312	1/1:6,26:32:74:693,74,0	0/0:9,0:9:24.07:0,24,277	0/0:30,1:31:53.77:0,54,873	0/0:26,1:27:41.75:0,42,729	0/0:16,0:16:45.13:0,45,519	0/0:25,0:25:63.14:0,63,702	0/0:21,0:21:54.14:0,54,605	0/0:20,0:20:51.14:0,51,578	0/0:27,0:28:78.06:0,78,880	1/1:0,15:15:45.02:412,45,0	0/0:15,0:15:22:0,22,416	0/0:23,0:23:30.67:0,31,554	0/0:24,0:24:66.20:0,66,762	0/0:11,0:11:33.10:0,33,381	0/0:22,2:24:11.25:0,11,618	0/0:30,0:30:61.80:0,62,834	0/0:19,0:19:48.14:0,48,553	0/0:25,1:26:41.74:0,42,734	0/0:22,0:22:63.19:0,63,723	0/0:28,0:27:58.82:0,59,900	0/0:18,0:18:48.10:0,48,539
chr10	59508902	.	C	CT	1145.78	PASS	AB=0.887;AC=25;AF=0.446;AN=56;BaseQRankSum=4.891;DP=590;FS=3.917;HRun=16;HaplotypeScore=108.6032;InbreedingCoeff=-0.1633;MQ=61.87;MQ0=12;MQRankSum=0.099;QD=2.82;ReadPosRankSum=6.926;VQSLOD=0.1325;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,1:23:17.58:0,18,103	0/0:1,0:6:6.01:0,6,17	0/0:30,0:10:13.35:0,13,63	0/0:24,0:13:14.33:0,14,63	0/0:30,1:35:12.27:0,12,146	1/1:14,2:17:5.06:97,5,0	0/1:8,8:16:30.60:54,0,31	0/0:16,0:31:20.40:0,20,93	0/1:16,5:22:11.09:11,0,71	0/1:29,0:28:29.93:72,0,30	0/1:22,0:22:30.13:30,0,87	0/1:8,9:18:12.97:108,0,13	0/1:7,11:17:10.77:18,0,11	0/1:15,0:15:18.19:18,0,60	0/1:17,1:21:26.65:66,0,27	0/1:26,0:27:23.78:119,0,24	0/0:11,0:27:20.59:0,21,76	1/1:12,0:12:2.57:11,3,0	0/1:17,0:17:8.37:8,0,60	0/1:21,0:21:25.77:26,0,28	0/1:14,0:13:7.43:7,0,30	1/1:15,3:18:2.68:121,3,0	0/1:8,4:12:14.40:14,0,24	1/1:10,18:30:29.97:260,30,0	0/1:26,0:26:56.53:93,0,57	1/1:26,0:26:13.28:135,13,0	0/1:19,0:21:46.07:46,0,82	0/0:3,0:3:5.65:0,6,31
chr10	59508905	.	T	TC	3727.84	PASS	AB=0.875;AC=27;AF=0.482;AN=56;BaseQRankSum=8.653;DP=603;FS=4.300;HRun=0;HaplotypeScore=100.2371;InbreedingCoeff=0.6004;MQ=63.27;MQ0=12;MQRankSum=-2.463;QD=10.96;ReadPosRankSum=5.529;VQSLOD=3.5299;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:23,1:24:69.14:69,0,347	0/0:9,0:8:11.91:0,12,89	0/0:33,0:12:20.75:0,21,164	0/0:24,0:13:21.32:0,21,123	0/1:37,0:37:99:141,0,506	0/0:17,0:16:41.48:0,41,291	0/0:15,0:15:24.68:0,25,229	0/0:35,0:34:93.25:0,93,790	0/1:24,0:23:99:134,0,221	1/1:19,8:26:36.10:458,36,0	1/1:9,7:23:25.27:215,25,0	0/0:18,0:18:33.20:0,33,248	0/0:18,0:17:13.50:0,13,111	0/1:11,4:15:15.03:122,0,15	1/1:10,8:18:24.86:208,25,0	1/1:13,12:26:52.72:486,53,0	0/0:28,1:27:35.02:0,35,483	0/1:4,6:10:20.95:21,0,64	1/1:17,2:19:35.05:263,35,0	1/1:15,4:19:41.44:293,41,0	1/1:8,3:12:18.72:143,19,0	0/0:21,0:20:48.37:0,48,386	0/0:13,0:13:28.73:0,29,267	0/0:30,0:30:22.51:0,23,260	1/1:17,12:29:53.57:437,54,0	1/1:7,20:26:63.52:503,64,0	1/1:18,5:23:32.88:220,33,0	1/1:5,0:5:0.38:15,0,0
chr10	59508906	.	T	TTTC	2612.16	PASS	AB=0.852;AC=13;AF=0.232;AN=56;BaseQRankSum=7.684;DP=607;FS=11.332;HRun=0;HaplotypeScore=127.1464;InbreedingCoeff=-0.2903;MQ=64.01;MQ0=12;MQRankSum=0.349;QD=9.40;ReadPosRankSum=5.294;VQSLOD=2.3908;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:54.82:0,55,531	0/0:9,0:8:15.02:0,15,153	0/0:35,0:13:16.73:0,17,174	0/1:24,0:13:3.21:3,0,93	0/0:37,0:37:93.25:0,93,882	0/0:17,0:16:22.09:0,22,297	0/0:15,0:15:29.93:0,30,310	0/0:34,0:33:86.88:0,87,860	0/0:24,0:23:38.01:0,38,390	0/1:24,5:28:13.25:407,0,13	0/1:17,5:22:79.54:80,0,99	0/0:17,0:17:35.84:0,36,336	0/0:17,0:16:11.95:0,12,115	0/1:11,4:15:99:150,0,111	0/1:11,8:18:50.20:289,0,50	0/1:15,11:27:55.27:461,0,55	0/0:29,0:27:58.31:0,58,627	0/0:9,0:9:14.80:0,15,111	0/1:17,2:19:70.83:98,0,71	0/1:19,2:21:96.57:97,0,105	0/1:13,0:12:31.85:32,0,41	0/0:20,0:19:48.31:0,48,377	0/0:14,0:14:14.80:0,15,233	0/0:28,0:28:55.19:0,55,411	0/1:21,9:30:50.76:494,0,51	0/1:21,8:28:77.74:376,0,78	0/1:19,4:23:99:248,0,103	0/1:7,0:7:28.81:29,0,42
chr10	59509406	.	AAAC	A	2067.79	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.819;DP=686;FS=0.000;HRun=0;HaplotypeScore=101.0633;InbreedingCoeff=0.9963;MQ=83.87;MQ0=1;MQRankSum=-3.739;QD=32.31;ReadPosRankSum=-3.311;VQSLOD=3.1475;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:93.25:0,93,1896	1/1:0,9:9:24.08:368,24,0	0/0:24,0:23:57.18:0,57,1030	0/0:28,0:28:37.22:0,37,1004	0/0:17,0:17:48.16:0,48,1016	0/0:20,0:20:60.21:0,60,1273	0/0:17,0:17:48.16:0,48,1022	1/1:5,27:32:75.23:1108,75,0	0/0:36,0:36:99:0,105,2239	0/0:29,0:29:84.28:0,84,1757	0/0:26,0:26:63.12:0,63,1249	0/0:20,0:20:57.20:0,57,1207	0/0:16,0:16:45.15:0,45,926	0/0:28,0:28:78.27:0,78,1660	0/0:30,0:30:84.29:0,84,1792	0/0:34,0:34:87.30:0,87,1857	1/1:3,20:23:48.16:735,48,0	0/0:15,0:15:42.14:0,42,896	0/0:30,0:30:72.25:0,72,1524	0/0:35,0:35:99:0,102,2172	0/0:22,0:22:60.21:0,60,1273	0/0:25,0:25:72.23:0,72,1497	0/0:12,0:12:36.12:0,36,768	0/0:28,0:28:66.23:0,66,1401	0/0:18,0:18:48.16:0,48,1024	0/0:38,0:38:99:0,108,2305	0/0:28,0:28:75.25:0,75,1548	0/0:9,0:9:18.06:0,18,384
chr10	59509656	.	A	AT	1671.46	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-9.032;DP=476;FS=2.883;HRun=1;HaplotypeScore=44.4464;InbreedingCoeff=0.9681;MQ=73.51;MQ0=0;MQRankSum=0.157;QD=35.56;ReadPosRankSum=-2.837;VQSLOD=2.6059;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:72.20:0,72,892	1/1:0,8:8:18.06:270,18,0	0/0:12,0:12:30.08:0,30,362	0/0:4,0:4:8.81:0,9,90	0/0:18,0:18:51.15:0,51,637	0/0:18,0:18:54.16:0,54,686	0/0:12,0:12:36.10:0,36,452	1/1:1,25:26:75.18:1005,75,0	0/0:10,0:10:27.93:0,28,310	0/0:29,0:29:84.26:0,84,1067	0/0:19,0:19:57.17:0,57,715	0/0:16,0:16:48.12:0,48,583	0/0:15,0:15:45.13:0,45,568	0/0:14,0:14:39.13:0,39,506	0/0:21,0:21:60.19:0,60,779	0/0:20,0:20:57.14:0,57,688	1/1:0,13:13:36.12:539,36,0	0/0:16,0:16:39.09:0,39,463	0/0:19,0:19:54.16:0,54,677	0/0:24,0:24:69.19:0,69,856	0/0:6,0:6:15.05:0,15,195	0/0:14,0:14:39.09:0,39,467	0/0:12,0:12:36.11:0,36,456	0/0:7,0:7:21.07:0,21,272	0/0:22,0:22:66.18:0,66,818	0/0:27,0:27:81.25:0,81,1038	0/0:36,0:36:99:0,105,1331	0/0:12,0:12:30.06:0,30,359
chr10	59511840	.	T	TC	1384.55	PASS	AB=0.683;AC=21;AF=0.375;AN=56;BaseQRankSum=-4.080;DP=478;FS=26.886;HRun=10;HaplotypeScore=68.1965;InbreedingCoeff=0.4448;MQ=86.69;MQ0=5;MQRankSum=-1.507;QD=7.44;ReadPosRankSum=-1.218;VQSLOD=-0.0079;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:9,13:22:0.42:170,0,0	1/1:0,2:2:3.01:32,3,0	0/0:44,0:30:30.82:0,31,241	0/0:45,0:33:13.74:0,14,216	0/1:10,11:21:0.89:142,0,1	1/1:8,14:22:26.81:267,27,0	1/1:1,10:11:9.02:91,9,0	0/1:21,0:21:25.27:141,0,25	0/1:5,10:15:28.05:81,0,28	0/0:16,1:17:21.51:0,22,193	0/0:10,0:11:23.91:0,24,199	0/1:5,7:12:12.66:70,0,13	1/1:3,7:10:12.03:128,12,0	0/0:10,0:10:23.52:0,24,174	0/0:21,1:23:33.35:0,33,370	0/0:19,0:19:37.99:0,38,313	1/1:2,12:14:3.85:202,4,0	0/1:4,3:7:21.19:21,0,43	0/0:10,0:10:20.97:0,21,172	0/0:24,0:25:48.61:0,49,384	0/0:21,1:22:15.51:0,16,267	1/1:4,7:11:11.96:107,12,0	1/1:1,8:9:2.68:32,3,0	0/1:2,7:9:12.55:83,0,13	0/0:13,0:13:20.95:0,21,224	0/0:17,0:17:35.89:0,36,286	0/0:22,0:24:57.95:0,58,446	0/0:9,0:10:19.96:0,20,148
chr10	59513761	.	T	TA	2143.01	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-9.018;DP=530;FS=5.842;HRun=10;HaplotypeScore=52.7912;InbreedingCoeff=0.9752;MQ=73.51;MQ0=0;MQRankSum=-0.336;QD=19.66;ReadPosRankSum=-1.058;VQSLOD=4.1676;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:54.89:0,55,654	0/0:4,0:4:11.98:0,12,97	0/0:11,0:11:14.97:0,15,137	0/0:10,0:10:14.93:0,15,122	0/0:27,0:27:74.90:0,75,613	1/1:7,18:26:48.10:503,48,0	1/1:6,10:16:33.04:339,33,0	0/0:32,0:32:74.84:0,75,608	0/0:14,0:14:32.92:0,33,266	0/0:29,0:29:77.89:0,78,638	0/0:24,0:24:62.91:0,63,517	1/1:3,13:16:20.37:336,20,0	1/1:8,12:20:33.72:521,34,0	0/0:26,0:26:68.85:0,69,558	0/0:19,0:19:50.91:0,51,416	0/0:22,0:23:58.97:0,59,474	0/0:24,0:24:47.87:0,48,389	0/0:23,0:23:55.92:0,56,444	0/0:17,0:17:32.92:0,33,271	0/0:20,1:22:20.95:0,21,366	0/0:18,0:18:47.94:0,48,394	1/1:2,5:7:12.03:128,12,0	1/1:1,13:14:33.08:352,33,0	1/1:0,10:10:15.04:160,15,0	0/0:14,0:14:38.95:0,39,320	0/0:17,0:17:47.94:0,48,394	0/0:28,0:28:71.85:0,72,582	0/0:7,0:7:14.95:0,15,123
chr10	59514295	.	A	ATGTGTG	769.66	PASS	AB=0.997;AC=22;AF=0.393;AN=56;BaseQRankSum=14.721;DP=740;FS=15.961;HRun=0;HaplotypeScore=188.8977;InbreedingCoeff=-0.2329;MQ=56.06;MQ0=9;MQRankSum=-0.026;QD=1.67;ReadPosRankSum=-0.157;VQSLOD=1.8631;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:49:2.60:0,3,307	1/1:5,0:5:3:25,3,0	0/0:35,0:18:28.57:0,29,366	0/0:35,0:21:26.74:0,27,353	0/1:26,0:26:11.01:11,0,188	0/1:26,0:26:10.84:11,0,292	0/0:24,0:24:0.86:0,1,383	1/1:39,0:37:44.60:349,45,0	0/1:24,0:24:44.28:44,0,118	0/1:25,0:24:29.08:29,0,375	0/1:11,0:10:14.56:15,0,80	0/1:16,0:17:1.91:2,0,180	0/1:26,0:26:33.32:33,0,315	0/1:26,0:26:0.16:0,0,292	0/1:49,0:49:17.93:18,0,410	0/1:35,0:35:45.51:46,0,123	1/1:4,12:17:8.77:205,9,0	0/1:15,0:15:4.11:4,0,68	0/0:31,0:29:20.10:0,20,644	0/0:22,0:21:5.93:0,6,279	0/0:32,0:32:2.94:0,3,337	0/0:25,0:25:1.49:0,1,155	0/0:23,0:23:8.07:0,8,227	0/1:42,0:42:17.10:17,0,465	0/1:18,0:17:4.67:5,0,253	0/1:28,0:28:46.74:47,0,398	0/1:20,0:20:1.35:1,0,204	0/1:12,0:12:41.72:58,0,42
chr10	59514307	.	A	ATGTG	15465.63	PASS	AB=0.610;AC=50;AF=0.893;AN=56;BaseQRankSum=-4.590;DP=758;FS=3.834;HRun=0;HaplotypeScore=120.0285;InbreedingCoeff=0.4598;MQ=57.30;MQ0=9;MQRankSum=2.001;QD=22.09;ReadPosRankSum=3.443;VQSLOD=4.5080;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,32:52:35.86:817,36,0	1/1:5,0:5:3:25,3,0	0/0:24,0:12:8.96:0,9,106	0/0:33,0:18:15.05:0,15,226	1/1:7,16:24:27.09:658,27,0	0/1:12,19:31:15.97:698,0,16	1/1:11,14:28:9.03:214,9,0	1/1:35,0:33:22.94:117,23,0	1/1:4,19:24:36.12:877,36,0	1/1:11,13:25:39.06:802,39,0	1/1:4,8:12:17.99:432,18,0	1/1:6,9:15:17.89:380,18,0	0/1:10,20:30:12.99:745,0,13	1/1:11,14:26:21.07:510,21,0	1/1:13,32:46:45.15:1066,45,0	1/1:7,26:34:53.68:1254,54,0	1/1:20,0:20:12.49:181,12,0	1/1:4,8:13:5.20:501,5,0	1/1:19,12:32:41.86:828,42,0	1/1:12,11:22:18.06:397,18,0	1/1:11,18:31:26.83:597,27,0	1/1:8,20:29:6.92:294,7,0	1/1:9,20:30:8.56:219,9,0	1/1:15,30:45:11.12:1340,11,0	1/1:7,11:18:23.82:524,24,0	1/1:11,17:29:16.15:1242,16,0	1/1:7,12:20:26.74:541,27,0	1/1:4,10:16:11.25:206,11,0
chr10	59514514	.	AG	A	1125.12	PASS	AB=0.931;AC=24;AF=0.429;AN=56;BaseQRankSum=-0.530;DP=312;FS=25.587;HRun=11;HaplotypeScore=56.6351;InbreedingCoeff=0.3258;MQ=85.11;MQ0=0;MQRankSum=-0.681;QD=5.07;ReadPosRankSum=2.386;VQSLOD=0.1912;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:12:9.16:0,9,60	0/1:4,0:5:4.70:5,0,16	0/0:17,1:12:6.37:0,6,170	0/1:27,0:22:12.55:13,0,100	0/0:3,0:6:5.63:0,6,29	1/1:6,10:16:32.32:254,32,0	1/1:4,8:13:25.96:197,26,0	1/1:14,0:25:22.04:64,22,0	0/1:5,1:9:9.82:10,0,67	0/0:6,0:6:6.02:0,6,64	0/1:6,1:7:32.57:33,0,50	1/1:11,10:21:31.45:248,31,0	0/1:9,1:10:16.58:17,0,21	0/0:7,0:7:6.88:0,7,66	0/1:12,1:13:26.22:26,0,128	0/0:11,0:11:18.03:0,18,177	1/1:3,1:11:15.68:61,16,0	0/0:1,0:1:3.01:0,3,32	0/0:3,0:3:5.65:0,6,33	0/1:7,0:7:6.45:6,0,54	0/0:5,0:5:6:0,6,57	1/1:13,6:20:24.40:181,24,0	1/1:8,6:14:5.48:114,5,0	1/1:13,2:15:10.13:78,10,0	0/0:8,0:8:12.89:0,13,122	0/0:6,0:6:12.01:0,12,116	0/0:7,0:7:18.48:0,18,170	0/1:7,0:7:6.57:7,0,106
chr10	59514538	.	TA	T	682	PASS	AB=0.849;AC=15;AF=0.268;AN=56;BaseQRankSum=1.996;DP=393;FS=5.964;HRun=15;HaplotypeScore=72.2365;InbreedingCoeff=0.4728;MQ=73.10;MQ0=1;MQRankSum=-1.973;QD=3.92;ReadPosRankSum=2.956;VQSLOD=0.8893;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:0.49:0,0,106	0/0:1,0:5:14.20:0,14,71	0/0:22,1:14:11.92:0,12,93	0/1:24,0:16:14.25:14,0,22	0/0:14,1:15:18.45:0,18,152	1/1:10,9:20:19.59:121,20,0	1/1:7,8:15:11.64:77,12,0	0/0:11,0:31:59.88:0,60,323	0/1:8,0:8:3.07:3,0,67	0/0:10,0:10:17.86:0,18,141	0/0:8,0:9:8.82:0,9,63	1/1:8,14:22:35.40:230,35,0	0/1:5,4:9:11.50:62,0,12	0/0:11,0:12:21.26:0,21,163	0/0:14,0:14:20.55:0,21,175	0/0:14,0:14:26.11:0,26,225	0/0:7,0:15:27.47:0,27,135	0/0:3,0:3:3:0,3,26	0/0:13,0:13:32.95:0,33,278	0/0:15,0:15:20.82:0,21,167	0/0:2,0:2:3:0,3,26	0/1:12,13:27:14.51:160,0,15	1/1:9,9:18:13.51:93,14,0	1/1:3,7:10:14.42:92,14,0	0/0:6,0:8:5.84:0,6,41	0/1:18,2:20:2.65:3,0,212	0/0:11,0:11:14.99:0,15,129	0/0:8,0:8:14.94:0,15,121
chr10	59515230	.	T	TCTC	3721.30	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-11.017;DP=623;FS=9.959;HRun=0;HaplotypeScore=87.9143;InbreedingCoeff=0.9886;MQ=81.56;MQ0=0;MQRankSum=-1.006;QD=55.54;ReadPosRankSum=-3.296;VQSLOD=4.6300;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:87.25:0,87,1448	1/1:0,10:10:27.09:591,27,0	0/0:32,0:30:76.14:0,76,1090	0/0:23,0:21:48.59:0,49,576	0/0:32,0:32:93.27:0,93,1504	0/0:17,0:17:51.15:0,51,817	0/0:14,0:14:42.11:0,42,663	1/1:2,31:37:93.45:1969,93,0	0/0:23,0:23:69.22:0,69,1148	0/0:25,0:25:75.24:0,75,1210	0/0:22,0:22:57.19:0,57,938	0/0:17,0:17:51.14:0,51,792	0/0:22,0:22:60.18:0,60,971	0/0:19,0:19:57.19:0,57,945	0/0:24,0:24:66.23:0,66,1120	0/0:30,0:30:84.27:0,84,1400	1/1:1,19:20:51.18:1162,51,0	0/0:18,0:18:54.09:0,54,831	0/0:26,0:26:72.22:0,72,1168	0/0:31,0:31:93.30:0,93,1527	0/0:14,0:14:42.14:0,42,712	0/0:12,0:12:36.12:0,36,614	0/0:18,0:18:51.17:0,51,863	0/0:22,0:20:60.21:0,60,1020	0/0:31,0:31:90.29:0,90,1474	0/0:24,0:24:72.25:0,72,1224	0/0:23,0:23:69.23:0,69,1152	0/0:5,0:5:12.03:0,12,178
chr10	59516076	.	A	AT	2510.66	PASS	AB=0.600;AC=13;AF=0.232;AN=56;BaseQRankSum=-10.803;DP=550;FS=8.162;HRun=10;HaplotypeScore=58.1108;InbreedingCoeff=0.8892;MQ=71.32;MQ0=0;MQRankSum=0.229;QD=22.42;ReadPosRankSum=2.036;VQSLOD=4.5337;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:53.91:0,54,443	0/0:10,0:10:16.79:0,17,129	0/0:19,0:17:23.50:0,24,177	0/0:9,0:10:10.57:0,11,73	0/0:27,0:27:64.96:0,65,540	1/1:4,23:27:69.01:718,69,0	0/1:3,6:9:3.59:171,0,4	0/0:34,0:36:82.91:0,83,667	0/0:23,0:23:65.92:0,66,542	0/0:22,0:23:61.97:0,62,499	0/0:32,0:32:89.88:0,90,738	1/1:3,15:18:39.07:406,39,0	1/1:1,10:11:24.06:256,24,0	0/0:18,0:18:38.92:0,39,320	0/0:20,0:20:59.86:0,60,483	0/0:21,0:21:53.92:0,54,443	0/0:11,0:11:32.89:0,33,261	0/0:6,0:6:4.34:0,4,28	0/0:17,0:17:46.18:0,46,372	0/0:35,0:35:89.86:0,90,739	0/0:15,0:15:38.94:0,39,320	1/1:4,13:17:36.05:371,36,0	1/1:1,15:16:42.58:449,43,0	1/1:1,13:14:11.45:327,11,0	0/0:18,0:18:44.93:0,45,367	0/0:19,0:19:53.93:0,54,443	0/0:36,0:36:51.86:0,52,627	0/0:19,0:19:47.93:0,48,394
chr10	59516309	.	CT	C	1307.23	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=6.364;DP=536;FS=9.468;HRun=5;HaplotypeScore=52.8507;InbreedingCoeff=0.9561;MQ=75.95;MQ0=0;MQRankSum=-1.632;QD=25.63;ReadPosRankSum=-2.921;VQSLOD=1.4378;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,132,1742	1/1:1,4:4:9.03:102,9,0	0/0:14,0:14:42.12:0,42,533	0/0:21,0:21:54.15:0,54,675	0/0:20,0:20:54.12:0,54,701	0/0:20,0:19:57.17:0,57,757	0/0:26,0:26:78.25:0,78,1052	1/1:7,22:29:78.20:867,78,0	0/0:13,0:13:39.13:0,39,532	0/0:28,0:28:78.25:0,78,1053	0/0:11,0:11:24.08:0,24,328	0/0:22,0:22:57.17:0,57,750	0/0:20,0:20:60.20:0,60,818	0/0:8,0:8:24.08:0,24,322	0/0:28,0:28:75.24:0,75,1010	0/0:19,0:19:54.18:0,54,739	1/1:2,15:17:42.09:475,42,0	0/0:9,0:9:23.99:0,24,283	0/0:13,0:13:36.11:0,36,478	0/0:13,0:13:39.13:0,39,533	0/0:31,0:31:87.29:0,87,1183	0/0:13,0:13:33.11:0,33,451	0/0:13,0:13:33.11:0,33,451	0/0:21,0:21:60.18:0,60,803	0/0:22,0:22:63.21:0,63,861	0/0:25,0:25:75.22:0,75,993	0/0:26,0:26:75.18:0,75,964	0/0:3,0:3:9.03:0,9,123
chr10	59516354	.	C	CTG	2619.51	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=3.056;DP=547;FS=13.631;HRun=0;HaplotypeScore=67.3976;InbreedingCoeff=0.9654;MQ=76.97;MQ0=0;MQRankSum=-0.271;QD=43.66;ReadPosRankSum=-4.159;VQSLOD=2.8950;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,114,1586	1/1:1,5:5:11.93:181,12,0	0/0:20,0:20:51.13:0,51,662	0/0:18,0:17:26.32:0,26,411	0/0:20,0:20:57.16:0,57,777	0/0:21,0:20:57.19:0,57,814	0/0:27,0:27:75.22:0,75,1037	1/1:1,33:35:99:1701,102,0	0/0:17,0:17:51.16:0,51,711	0/0:24,0:24:69.22:0,69,958	0/0:14,0:14:39.13:0,39,557	0/0:15,0:15:39.12:0,39,540	0/0:18,0:18:51.10:0,51,703	0/0:8,0:8:24.08:0,24,343	0/0:31,0:31:87.28:0,87,1224	0/0:22,0:22:57.19:0,57,813	1/1:2,17:19:53.96:877,54,0	0/0:9,0:9:21.07:0,21,300	0/0:18,0:18:54.15:0,54,708	0/0:17,0:17:51.11:0,51,672	0/0:30,0:30:87.26:0,87,1207	0/0:10,0:10:30.10:0,30,429	0/0:15,0:15:41.80:0,42,550	0/0:17,0:17:51.17:0,51,729	0/0:23,0:23:69.20:0,69,946	0/0:20,0:20:57.17:0,57,769	0/0:32,0:32:86.94:0,87,1133	0/0:3,0:3:9.01:0,9,109
chr10	59516901	.	A	AT	1224.66	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-8.839;DP=413;FS=34.975;HRun=7;HaplotypeScore=42.8195;InbreedingCoeff=0.9610;MQ=72.90;MQ0=2;MQRankSum=0.512;QD=24.99;ReadPosRankSum=-1.688;VQSLOD=1.1062;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:45.07:0,45,435	1/1:0,6:6:15.05:181,15,0	0/0:29,0:13:29.71:0,30,255	0/0:23,0:13:22.60:0,23,172	0/0:26,0:26:69.11:0,69,666	0/0:17,0:17:42.06:0,42,405	0/0:9,0:9:24.03:0,24,232	1/1:6,23:29:69.01:785,69,0	0/0:10,0:10:30.05:0,30,290	0/0:15,0:15:42.06:0,42,405	0/0:22,0:22:57.07:0,57,545	0/0:12,0:12:36.06:0,36,348	0/0:12,0:12:30.03:0,30,283	0/0:9,0:9:27.03:0,27,256	0/0:20,0:20:54.07:0,54,515	0/0:9,0:9:27.04:0,27,261	1/1:1,13:14:33.10:399,33,0	0/0:8,0:8:21.03:0,21,202	0/0:16,0:16:36.05:0,36,348	0/0:21,0:21:57.09:0,57,550	0/0:3,0:3:9.01:0,9,87	0/0:5,0:5:15.02:0,15,145	0/0:10,0:10:24.04:0,24,232	0/0:8,0:8:24.02:0,24,222	0/0:15,0:15:45.03:0,45,419	0/0:18,0:18:51.08:0,51,492	0/0:23,0:23:60.07:0,60,574	0/0:9,0:9:21.03:0,21,202
chr10	59518101	.	TG	T	1064.63	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=9.795;DP=498;FS=13.468;HRun=3;HaplotypeScore=80.3608;InbreedingCoeff=0.9859;MQ=77.70;MQ0=0;MQRankSum=-8.947;QD=26.62;ReadPosRankSum=1.315;VQSLOD=2.0967;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,7:8:18.06:215,18,0	0/0:9,0:9:27.09:0,27,388	0/0:15,0:15:41.20:0,41,576	0/0:10,0:10:30:0,30,385	1/1:0,20:20:51.16:610,51,0	0/0:23,0:23:69.20:0,69,970	0/0:16,0:16:45:0,45,630	0/0:37,0:37:99:0,105,1480	1/1:0,7:7:21.06:251,21,0	0/0:28,0:28:84.28:0,84,1205	0/0:22,0:22:63.20:0,63,887	0/0:12,0:12:30.10:0,30,429	0/0:15,0:15:45.13:0,45,613	0/0:19,0:19:57.19:0,57,821	0/0:20,0:19:57.18:0,57,803	0/0:15,0:15:45.15:0,45,648	0/0:22,0:22:63.19:0,63,888	1/1:0,4:4:12.04:144,12,0	0/0:24,0:24:66.20:0,66,916	0/0:34,0:34:96.31:0,96,1363	0/0:21,0:21:54.17:0,54,758	0/0:15,0:15:36.12:0,36,517	0/0:19,0:19:57.17:0,57,800	0/0:8,0:7:21.07:0,21,302	0/0:20,0:20:57.19:0,57,820	0/0:19,0:19:54.18:0,54,777	0/0:26,0:26:78.25:0,78,1104	0/0:9,0:9:27.09:0,27,388
chr10	59518207	.	CT	C	1638.32	PASS	AB=0.751;AC=31;AF=0.554;AN=56;BaseQRankSum=0.746;DP=439;FS=17.303;HRun=16;HaplotypeScore=71.9078;InbreedingCoeff=0.3033;MQ=72.24;MQ0=7;MQRankSum=0.904;QD=4.91;ReadPosRankSum=2.066;VQSLOD=0.7496;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,14:22:21.54:140,22,0	1/1:2,0:2:2.87:18,3,0	0/0:25,0:12:0.20:0,0,33	0/0:23,0:15:19.05:0,19,128	0/1:14,4:21:15.40:111,0,15	0/0:10,0:14:23.65:0,24,177	0/1:13,1:14:9.85:10,0,119	1/1:23,16:41:3.28:228,3,0	1/1:9,0:12:14.97:41,15,0	1/1:7,4:11:4.47:61,4,0	0/1:1,5:6:4.03:57,0,4	0/1:13,0:14:4.25:4,0,79	0/0:13,0:14:29.52:0,30,220	0/1:4,6:10:10.91:56,0,11	1/1:5,7:12:8.01:52,8,0	1/1:7,14:21:9.08:140,9,0	0/1:10,15:24:22.32:141,0,22	1/1:6,12:18:22.10:128,22,0	1/1:12,9:21:29.16:167,29,0	0/0:5,0:5:0.94:0,1,2	1/1:11,5:17:27.31:154,27,0	0/0:8,0:8:14.11:0,14,103	0/0:8,0:8:14.97:0,15,122	0/0:7,0:7:14.54:0,15,104	1/1:8,6:16:17.19:87,17,0	0/1:18,5:25:4.57:121,0,5	0/1:8,6:14:1.09:93,0,1	0/1:8,1:8:7.92:8,0,43
chr10	59519339	.	A	AT	1886.92	PASS	AB=0.889;AC=7;AF=0.125;AN=56;BaseQRankSum=9.582;DP=472;FS=1.057;HRun=9;HaplotypeScore=56.0663;InbreedingCoeff=0.7283;MQ=72.06;MQ0=4;MQRankSum=-0.251;QD=20.97;ReadPosRankSum=-2.330;VQSLOD=3.2717;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:80.92:0,81,691	1/1:2,6:8:18.05:199,18,0	0/0:32,0:15:6.76:0,7,101	0/0:24,0:13:5.06:0,5,71	0/0:27,0:27:68.97:0,69,596	0/0:21,0:20:59.95:0,60,513	0/0:8,0:8:23.98:0,24,204	1/1:6,34:40:99:1094,102,0	0/0:11,0:11:32.94:0,33,277	0/0:20,0:20:53.99:0,54,469	0/0:17,0:17:50.98:0,51,439	0/0:10,0:10:26.99:0,27,234	0/0:8,0:8:17.99:0,18,156	0/0:7,0:7:20.97:0,21,176	0/1:14,2:16:9.22:9,0,156	0/0:14,0:14:26.96:0,27,231	1/1:1,25:26:66.18:730,66,0	0/0:14,0:14:35.96:0,36,307	0/0:25,0:25:56.96:0,57,490	0/0:14,0:14:35.96:0,36,305	0/0:4,0:4:2.99:0,3,26	0/0:5,0:5:9:0,9,78	0/0:7,0:7:21:0,21,182	0/0:6,0:5:17.96:0,18,150	0/0:21,0:21:57.55:0,58,515	0/0:25,0:25:59.97:0,60,516	0/0:21,0:21:53.98:0,54,466	0/0:11,0:11:29.99:0,30,260
chr10	59521865	.	A	AT	1358.93	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-7.956;DP=393;FS=0.597;HRun=6;HaplotypeScore=41.5292;InbreedingCoeff=0.8689;MQ=72.53;MQ0=0;MQRankSum=-0.862;QD=25.17;ReadPosRankSum=-1.715;VQSLOD=2.3163;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:45.63:0,46,534	1/1:1,5:6:15.05:189,15,0	0/0:14,0:12:11.41:0,11,140	0/0:16,0:11:13.63:0,14,194	0/0:35,0:35:96.17:0,96,956	0/0:20,0:20:60.14:0,60,612	0/0:4,0:4:9.02:0,9,92	1/1:6,26:32:69.81:933,70,0	0/0:7,0:7:9.01:0,9,87	0/0:13,0:13:33.07:0,33,336	0/0:20,0:20:57.10:0,57,564	0/0:7,0:7:18.04:0,18,184	0/0:10,0:10:27.06:0,27,275	0/0:3,0:3:9.02:0,9,92	0/0:8,0:7:21.04:0,21,209	0/0:14,0:14:39.07:0,39,387	1/1:2,14:16:30.10:377,30,0	0/0:17,0:17:35.99:0,36,346	0/0:21,0:21:51.10:0,51,517	0/0:8,0:8:24.03:0,24,233	0/0:8,0:8:21.05:0,21,214	0/0:4,0:4:6:0,6,57	0/0:10,0:10:27.05:0,27,270	0/0:5,0:5:12.01:0,12,116	0/0:16,0:16:48.11:0,48,489	0/0:26,0:26:72.13:0,72,721	0/0:19,0:19:54.10:0,54,538	0/0:14,0:15:37.95:0,38,373
chr10	59522386	.	TA	T	13506.23	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-5.340;DP=520;FS=3.456;HRun=6;HaplotypeScore=52.6741;InbreedingCoeff=0.9850;MQ=89.79;MQ0=0;MQRankSum=-9.490;QD=28.20;ReadPosRankSum=5.789;VQSLOD=4.9892;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,19:19:51.13:548,51,0	1/1:1,6:7:15.04:161,15,0	0/0:23,0:23:56.09:0,56,610	0/0:18,0:18:48.11:0,48,578	1/1:2,21:23:60.15:644,60,0	1/1:1,18:19:51.13:548,51,0	1/1:2,16:18:45.11:484,45,0	1/1:2,23:25:69.13:724,69,0	1/1:1,16:17:39.10:419,39,0	1/1:0,24:24:69.17:741,69,0	1/1:0,15:15:45.11:483,45,0	1/1:0,17:17:48.12:516,48,0	1/1:2,9:11:27.07:290,27,0	1/1:0,7:7:18.05:193,18,0	1/1:1,21:22:57.14:613,57,0	1/1:1,24:25:66.10:695,66,0	1/1:1,18:19:45.06:462,45,0	1/1:0,17:17:48.12:516,48,0	1/1:1,26:27:75.13:778,75,0	1/1:2,16:18:48.08:503,48,0	1/1:2,22:24:60.15:645,60,0	1/1:1,14:15:39.09:418,39,0	1/1:1,20:21:60.15:644,60,0	1/1:1,18:19:45.11:483,45,0	1/1:0,17:17:36.09:387,36,0	1/1:0,20:20:60.15:645,60,0	1/1:1,24:25:69.17:741,69,0	1/1:0,8:8:21.05:226,21,0
chr10	59522483	.	TACACACAC	T	2503.56	PASS	AB=1.000;AC=29;AF=0.580;AN=50;BaseQRankSum=0.260;DP=308;FS=6.452;HRun=0;HaplotypeScore=75.8334;InbreedingCoeff=0.6352;MQ=60.92;MQ0=13;MQRankSum=-2.343;QD=16.92;ReadPosRankSum=1.961;VQSLOD=1.5097;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:15,1:16:6:100,6,0	0/0:4,0:4:6:0,6,70	0/0:29,0:11:3.01:0,3,78	0/0:36,0:15:6.01:0,6,118	1/1:8,2:11:12.04:263,12,0	0/0:9,0:9:9.03:0,9,319	0/0:10,0:13:8.97:0,9,272	0/1:8,0:8:2.12:2,0,21	1/1:7,2:9:9.03:227,9,0	1/1:5,1:5:3.01:76,3,0	./.	0/0:9,0:9:15.05:0,15,477	./.	1/1:4,3:8:9.03:207,9,0	1/1:7,0:7:3.01:49,3,0	1/1:6,2:8:11.61:187,12,0	0/0:8,0:13:18.45:0,18,151	./.	1/1:6,2:8:6.02:151,6,0	1/1:5,8:14:21.07:510,21,0	1/1:18,0:19:14.25:183,14,0	0/0:11,0:12:3.01:0,3,105	0/0:6,0:6:0.47:0,0,1	0/0:13,0:13:12:0,12,406	1/1:6,2:8:6.01:101,6,0	1/1:8,7:14:14.51:334,15,0	1/1:2,2:5:9.92:209,10,0	1/1:4,1:5:3.01:76,3,0
chr10	59522747	.	C	CA	3494.90	PASS	AB=0.671;AC=37;AF=0.661;AN=56;BaseQRankSum=-4.055;DP=417;FS=10.498;HRun=14;HaplotypeScore=50.6592;InbreedingCoeff=0.1650;MQ=54.58;MQ0=9;MQRankSum=1.693;QD=10.13;ReadPosRankSum=2.317;VQSLOD=2.2610;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:12,13:28:54.15:181,0,54	0/0:6,0:6:8.83:0,9,58	0/0:8,0:5:1.36:0,1,24	0/0:5,0:1:0:0,0,0	0/1:7,7:15:1.43:102,0,1	0/1:6,10:15:2.63:211,0,3	1/1:3,6:10:20.84:172,21,0	0/0:28,1:30:0.72:0,1,165	0/1:5,6:9:6.41:62,0,6	1/1:9,7:17:20.82:167,21,0	1/1:10,4:14:12.72:95,13,0	1/1:4,8:11:9:79,9,0	1/1:4,4:7:11.92:97,12,0	0/1:3,4:8:7.42:54,0,7	1/1:6,10:17:7.76:213,8,0	1/1:5,12:16:8.17:192,8,0	0/0:21,0:20:37.27:0,37,230	0/1:6,3:8:23.53:64,0,24	1/1:15,9:24:6.02:198,6,0	0/1:8,6:15:1.57:135,0,2	0/1:6,2:7:14.48:42,0,14	1/1:2,8:11:4.57:152,5,0	1/1:7,8:15:7.68:191,8,0	1/1:10,12:25:21.58:319,22,0	1/1:5,13:18:26.78:237,27,0	1/1:7,12:19:12.54:223,13,0	0/1:7,10:18:2.63:216,0,3	1/1:1,3:5:11.84:93,12,0
chr10	59523073	.	A	AT	2083.07	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=-9.717;DP=636;FS=0.000;HRun=5;HaplotypeScore=54.6476;InbreedingCoeff=0.8223;MQ=72.73;MQ0=0;MQRankSum=-0.439;QD=26.37;ReadPosRankSum=-2.575;VQSLOD=1.9354;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:66.16:0,66,708	1/1:0,13:13:39.13:513,39,0	0/1:10,0:11:8.49:8,0,162	0/0:8,0:8:15.91:0,16,155	0/0:27,0:27:75.17:0,75,797	0/0:31,0:31:90.22:0,90,967	0/0:13,0:13:36.09:0,36,387	1/1:6,24:30:69.20:879,69,0	0/0:17,0:17:45.11:0,45,484	0/0:33,0:33:93.23:0,93,994	0/0:22,0:22:57.14:0,57,612	0/0:27,0:27:81.20:0,81,870	0/0:26,0:26:69.17:0,69,741	0/0:20,0:20:60.15:0,60,645	0/0:38,0:38:99:0,111,1185	0/0:29,0:29:81.20:0,81,870	1/1:0,24:24:63.20:829,63,0	0/0:3,0:2:6.01:0,6,64	0/0:17,0:17:42.07:0,42,435	0/0:27,0:27:63.13:0,63,669	0/0:18,0:18:51.10:0,51,536	0/0:24,0:24:72.18:0,72,774	0/0:29,0:29:87.22:0,87,935	0/0:24,0:24:69.17:0,69,741	0/0:21,0:21:63.16:0,63,677	0/0:26,0:26:63.16:0,63,677	0/0:38,0:38:99:0,99,1056	0/0:16,0:16:48.12:0,48,516
chr10	59523395	.	AT	A	1632.47	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.155;DP=527;FS=4.084;HRun=5;HaplotypeScore=52.8289;InbreedingCoeff=0.9956;MQ=87.24;MQ0=1;MQRankSum=-0.092;QD=27.67;ReadPosRankSum=-0.825;VQSLOD=3.3059;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,105,1373	1/1:0,8:8:18.05:204,18,0	0/0:26,0:23:56.16:0,56,663	0/0:26,0:25:53.28:0,53,826	0/0:15,0:15:42.10:0,42,525	0/0:18,0:18:51.14:0,51,664	0/0:12,0:12:33.10:0,33,431	1/1:1,31:32:93.19:1026,93,0	0/0:12,0:12:33.11:0,33,450	0/0:25,0:25:72.23:0,72,962	0/0:14,0:14:42.04:0,42,528	0/0:18,0:18:51.16:0,51,681	0/0:23,0:23:63.17:0,63,812	0/0:19,0:19:54.17:0,54,721	0/0:21,0:21:60.20:0,60,821	0/0:17,0:17:51.14:0,51,664	1/1:1,18:19:48.14:544,48,0	0/0:9,0:9:24.08:0,24,324	0/0:19,0:19:51.16:0,51,683	0/0:27,0:27:74.97:0,75,995	0/0:15,0:14:39.13:0,39,532	0/0:12,0:12:33.08:0,33,408	0/0:14,0:14:39.10:0,39,500	0/0:11,0:11:27.08:0,27,354	0/0:18,0:18:54.18:0,54,737	0/0:18,0:18:54.15:0,54,708	0/0:31,0:31:84.25:0,84,1114	0/0:11,0:11:33.11:0,33,451
chr10	59524911	.	C	CA	1428.44	PASS	AC=6;AF=0.188;AN=32;BaseQRankSum=-4.616;DP=408;FS=4.443;HRun=2;HaplotypeScore=55.6797;InbreedingCoeff=0.8948;MQ=53.01;MQ0=17;MQRankSum=-2.938;QD=24.21;ReadPosRankSum=0.065;VQSLOD=3.3387;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:35:78.24:0,78,965	1/1:0,12:11:27.09:388,27,0	0/0:14,0:1:2.99:0,3,23	0/0:15,0:3:6.01:0,6,66	0/0:41,0:41:99:0,108,1338	0/0:21,0:20:42.13:0,42,521	0/0:16,0:15:20.96:0,21,260	1/1:3,16:9:24.08:345,24,0	0/0:32,0:32:78.24:0,78,967	./.	./.	0/0:26,0:26:66.05:0,66,818	0/0:35,0:35:96.21:0,96,1189	./.	./.	./.	1/1:0,28:28:57.19:821,57,0	0/0:22,0:19:39.11:0,39,470	./.	./.	./.	0/0:36,0:34:66.21:0,66,818	0/0:29,0:27:60.18:0,60,741	0/0:19,0:18:42.13:0,42,521	./.	./.	./.	./.
chr10	59525516	.	A	AT	386.40	PASS	AB=0.517;AC=12;AF=0.857;AN=14;BaseQRankSum=1.950;DP=20;FS=0.000;HRun=0;HaplotypeScore=98.3421;MQ=29.00;MQ0=0;MQRankSum=0.350;QD=19.32;ReadPosRankSum=1.950;VQSLOD=5.7838;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:1,7:8:4.58:197,0,5	./.	./.	./.	1/1:0,1:1:0.47:1,0,0	1/1:0,2:2:1.80:35,2,0	./.	./.	./.	./.	./.	1/1:0,1:1:3.01:42,3,0	1/1:0,1:1:3.01:38,3,0	./.	./.	./.	1/1:0,4:4:11.52:120,12,0	./.	./.	./.	./.	./.	./.	0/1:0,3:3:14.08:30,0,14	./.	./.	./.	./.
chr10	59526581	.	GT	G	915.98	PASS	AB=0.500;AC=13;AF=0.283;AN=46;BaseQRankSum=7.196;DP=413;FS=47.834;HRun=1;HaplotypeScore=46.6281;InbreedingCoeff=0.8747;MQ=82.10;MQ0=6;MQRankSum=-7.499;QD=12.55;ReadPosRankSum=1.109;VQSLOD=-0.2679;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:54.18:0,54,861	0/0:7,0:7:21.07:0,21,335	0/0:10,0:10:30.09:0,30,434	0/0:17,0:17:45.15:0,45,718	0/0:26,0:26:72.24:0,72,1137	0/0:38,0:38:99:0,114,1817	0/0:19,0:19:57.19:0,57,911	0/0:29,0:29:87.28:0,87,1348	0/0:20,0:20:60.20:0,60,959	1/1:0,8:8:24.08:335,24,0	./.	0/0:20,0:20:60.14:0,60,840	0/0:25,0:25:72.25:0,72,1148	./.	1/1:0,14:12:3.01:40,3,0	./.	0/0:24,0:24:72.22:0,72,1125	0/0:6,0:6:18.06:0,18,287	1/1:0,5:5:15.05:209,15,0	./.	0/1:0,6:5:0:0,0,0	0/0:22,0:22:57.19:0,57,898	0/0:21,0:21:63.21:0,63,997	0/0:14,0:14:42.14:0,42,668	1/1:0,17:15:2.99:42,3,0	1/1:0,7:7:21.07:288,21,0	1/1:0,16:16:12.04:161,12,0	./.
chr10	59528575	.	C	CT	3071.16	PASS	AB=0.635;AC=28;AF=0.519;AN=54;BaseQRankSum=-6.218;DP=388;FS=0.000;HRun=12;HaplotypeScore=41.8977;InbreedingCoeff=0.7276;MQ=73.86;MQ0=0;MQRankSum=0.868;QD=14.02;ReadPosRankSum=-2.311;VQSLOD=2.7548;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:32.64:0,33,240	1/1:0,4:4:6.01:58,6,0	./.	0/0:12,0:11:14.52:0,15,80	0/0:17,0:18:40.78:0,41,290	0/0:19,1:20:18.21:0,18,288	0/0:14,0:15:28.83:0,29,203	1/1:3,24:27:45.31:559,45,0	0/0:14,0:14:35.72:0,36,261	1/1:5,9:14:2.23:179,2,0	0/1:6,5:11:6.80:92,0,7	0/0:7,1:8:14.83:0,15,109	0/0:18,0:18:8.58:0,9,192	1/1:3,10:13:23.99:224,24,0	0/1:4,10:14:3.88:128,0,4	1/1:5,11:16:21.03:204,21,0	1/1:2,12:14:18.03:175,18,0	0/0:11,0:11:26.81:0,27,197	1/1:7,6:13:5.54:172,6,0	1/1:6,9:15:2.06:163,2,0	1/1:7,8:15:24.27:234,24,0	0/0:5,0:5:5.94:0,6,43	0/0:17,0:17:26.72:0,27,195	0/0:8,0:8:8.88:0,9,66	1/1:4,15:19:11.14:270,11,0	1/1:4,16:20:42.03:389,42,0	1/1:2,17:22:28.76:393,29,0	1/1:0,2:2:3:29,3,0
chr10	59528717	.	CT	C	11262.43	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-5.404;DP=490;FS=2.353;HRun=8;HaplotypeScore=62.1293;InbreedingCoeff=0.9140;MQ=79.72;MQ0=0;MQRankSum=-4.530;QD=25.03;ReadPosRankSum=3.925;VQSLOD=5.6520;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,14:17:39.06:376,39,0	1/1:0,10:10:30.05:290,30,0	0/0:14,0:11:14.42:0,14,107	0/0:23,1:19:23.10:0,23,203	1/1:1,27:28:78.04:741,78,0	1/1:2,22:24:63.10:608,63,0	1/1:0,11:11:27.04:261,27,0	1/1:5,28:33:87.04:828,87,0	1/1:1,17:18:38.97:377,39,0	1/1:3,18:21:54.08:521,54,0	1/1:2,24:26:65.95:615,66,0	1/1:1,13:14:36.06:348,36,0	1/1:1,15:16:42.06:406,42,0	1/1:0,17:17:39.06:377,39,0	1/1:0,11:11:30.05:290,30,0	1/1:0,17:17:48.08:464,48,0	1/1:2,8:10:27.01:253,27,0	1/1:1,16:17:48.08:464,48,0	1/1:1,14:15:42.07:406,42,0	1/1:0,26:26:78.13:753,78,0	1/1:0,4:4:12.02:116,12,0	1/1:1,10:11:27.04:261,27,0	1/1:1,14:15:42.07:406,42,0	1/1:0,2:2:6.01:58,6,0	1/1:2,19:21:51.08:493,51,0	1/1:2,30:32:90.12:860,90,0	1/1:5,23:28:57.08:550,57,0	1/1:1,5:6:15.02:145,15,0
chr10	59528785	.	G	GT	935.68	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-3.769;DP=568;FS=9.174;HRun=10;HaplotypeScore=82.8494;InbreedingCoeff=0.9114;MQ=68.05;MQ0=5;MQRankSum=0.336;QD=20.34;ReadPosRankSum=-4.094;VQSLOD=2.4357;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:53.84:0,54,432	1/1:1,2:3:6.02:64,6,0	0/0:44,0:16:17.27:0,17,102	0/0:25,0:13:14.50:0,14,115	0/0:28,0:28:68.51:0,69,542	0/0:10,0:10:23.97:0,24,197	0/0:11,0:11:26.97:0,27,222	1/1:6,17:27:65.34:599,65,0	0/0:21,0:21:50.83:0,51,418	0/0:23,0:23:59.91:0,60,492	0/0:27,0:27:68.80:0,69,558	0/0:18,0:18:37.95:0,38,301	0/0:19,0:20:43.88:0,44,338	0/0:19,0:19:47.70:0,48,376	0/0:13,0:13:35.94:0,36,293	0/0:18,0:18:35.89:0,36,292	1/1:7,9:15:39.55:407,40,0	0/0:19,0:19:41.78:0,42,331	0/0:28,0:28:59.91:0,60,493	0/0:26,1:27:35.98:0,36,488	0/0:8,0:8:17.94:0,18,148	0/0:13,0:13:26.96:0,27,222	0/0:24,0:24:59.91:0,60,492	0/0:13,0:12:32.89:0,33,262	0/0:23,0:23:45.43:0,45,439	0/0:27,1:28:33.90:0,34,485	0/0:29,0:29:74.74:0,75,604	0/0:4,0:4:5.98:0,6,48
chr10	59529007	.	AC	A	2327.70	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=10.291;DP=712;FS=13.524;HRun=3;HaplotypeScore=72.7480;InbreedingCoeff=0.8303;MQ=76.81;MQ0=0;MQRankSum=0.530;QD=24.25;ReadPosRankSum=-3.069;VQSLOD=1.5475;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,117,1667	1/1:0,7:7:18.06:223,18,0	0/0:19,0:19:49.92:0,50,619	0/1:21,0:20:6.69:7,0,519	0/0:26,0:26:78.23:0,78,1070	0/0:22,0:22:60.20:0,60,864	0/0:28,0:28:72.23:0,72,1018	1/1:2,37:39:99:1313,111,0	0/0:31,0:31:87.29:0,87,1244	0/0:36,0:36:99:0,105,1511	0/0:23,0:23:66.22:0,66,949	0/0:20,0:20:57.18:0,57,794	0/0:29,0:29:84.24:0,84,1185	0/0:23,0:23:69.18:0,69,933	0/0:41,0:41:99:0,117,1651	0/0:25,0:25:69.21:0,69,960	1/1:1,28:29:75.24:930,75,0	0/0:18,0:18:51.17:0,51,730	0/0:29,0:29:78.24:0,78,1088	0/0:9,0:9:27.08:0,27,370	0/0:49,0:49:99:0,147,2117	0/0:20,0:20:57.19:0,57,820	0/0:15,0:15:42.13:0,42,585	0/0:35,0:35:99:0,102,1439	0/0:20,0:20:60.20:0,60,862	0/0:28,0:28:78.26:0,78,1123	0/0:24,0:24:69.23:0,69,993	0/0:2,0:2:6.02:0,6,85
chr10	59529163	.	GGTGTGTGT	G	1448.16	PASS	AB=1.000;AC=27;AF=0.614;AN=44;BaseQRankSum=1.888;DP=571;FS=1.367;HRun=0;HaplotypeScore=150.0717;InbreedingCoeff=0.4939;MQ=58.25;MQ0=26;MQRankSum=-0.573;QD=4.89;ReadPosRankSum=0.272;VQSLOD=2.7403;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:24:0.47:0,0,1	0/0:2,0:2:6.02:0,6,111	./.	./.	./.	0/0:13,0:13:2.04:0,2,6	0/0:23,0:21:0:0,0,0	0/0:41,0:41:9.93:0,10,52	1/1:12,0:14:6.02:112,6,0	1/1:23,0:26:11.86:127,12,0	./.	1/1:18,0:17:6.02:137,6,0	0/1:16,0:16:37.91:84,0,38	1/1:15,2:18:3.01:74,3,0	0/0:14,0:21:14.98:0,15,180	1/1:10,6:16:6.02:130,6,0	0/0:23,0:20:7.47:0,7,31	./.	1/1:26,0:26:5.97:101,6,0	1/1:16,5:22:5.93:55,6,0	1/1:31,0:28:15.50:232,16,0	0/0:20,0:19:1.55:0,2,4	./.	1/1:26,0:25:11.84:117,12,0	1/1:20,4:23:0.47:1,0,0	1/1:24,6:29:16.09:249,16,0	1/1:13,3:15:5.98:94,6,0	1/1:7,2:6:3.01:74,3,0
chr10	59529212	.	GTGTGTGTC	G	1465.30	PASS	AB=0.968;AC=21;AF=0.375;AN=56;BaseQRankSum=6.908;DP=514;FS=28.656;HRun=0;HaplotypeScore=134.2657;InbreedingCoeff=-0.0535;MQ=47.96;MQ0=34;MQRankSum=-0.310;QD=4.68;ReadPosRankSum=-1.662;VQSLOD=0.6980;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:27:27.40:0,27,322	0/0:4,0:4:5.99:0,6,62	0/0:17,0:4:8.88:0,9,61	0/0:25,0:5:2.07:0,2,56	0/0:14,0:11:5.97:0,6,45	1/1:21,0:19:29.71:236,30,0	1/1:20,0:15:29.33:209,29,0	0/1:23,0:22:5.15:5,0,67	0/1:11,0:10:61.10:61,0,82	0/1:20,0:19:2.80:3,0,252	0/0:22,0:22:26.69:0,27,205	1/1:3,10:12:6.02:173,6,0	0/1:5,12:15:13.38:112,0,13	0/1:16,0:15:79.46:79,0,145	0/0:20,0:20:42.01:0,42,442	0/1:19,0:19:55.93:56,0,207	0/1:23,0:19:11.80:12,0,25	0/1:3,0:3:29.33:29,0,36	0/1:16,0:15:27.75:28,0,213	0/0:20,0:19:13.35:0,13,212	0/1:38,0:34:39.30:39,0,443	0/0:4,19:21:1.22:0,1,10	0/0:2,8:9:0:0,0,0	1/1:27,0:26:44.94:446,45,0	0/0:16,0:15:20.97:0,21,174	0/1:26,0:25:65.68:66,0,345	0/1:10,0:9:34.60:35,0,104	0/1:10,0:6:42.96:43,0,63
chr10	59529226	.	C	CTG	1228.85	PASS	AC=4;AF=0.074;AN=54;BaseQRankSum=1.707;DP=569;FS=5.741;HRun=0;HaplotypeScore=107.1521;InbreedingCoeff=0.7626;MQ=51.31;MQ0=24;MQRankSum=-3.042;QD=22.34;ReadPosRankSum=-3.820;VQSLOD=2.8480;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:25:45.15:0,45,644	./.	0/0:32,0:9:17.23:0,17,272	0/0:40,0:14:26.99:0,27,334	0/0:12,0:13:15.05:0,15,215	0/0:19,0:18:33.09:0,33,464	0/0:21,0:18:38.80:0,39,485	1/1:4,26:32:81.21:1268,81,0	0/0:16,0:15:10.38:0,10,346	0/0:21,0:20:46:0,46,594	0/0:24,0:24:38.87:0,39,540	0/0:11,0:11:6:0,6,66	0/0:19,0:18:21.33:0,21,266	0/0:16,0:15:33.08:0,33,434	0/0:17,0:17:42.14:0,42,579	0/0:23,0:23:51.01:0,51,660	1/1:7,15:20:6:71,6,0	0/0:4,0:4:12.01:0,12,151	0/0:22,0:20:57.11:0,57,744	0/0:19,0:19:39.13:0,39,556	0/0:33,0:32:74.93:0,75,1027	0/0:21,0:21:6.48:0,6,67	0/0:11,0:11:6.02:0,6,83	0/0:27,0:27:31.23:0,31,566	0/0:18,0:17:27.07:0,27,366	0/0:31,0:28:63.14:0,63,837	0/0:15,0:14:36.04:0,36,489	0/0:11,0:9:21.04:0,21,280
chr10	59529520	.	A	AC	1560.27	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-10.076;DP=619;FS=1.889;HRun=6;HaplotypeScore=63.8049;InbreedingCoeff=0.9291;MQ=73.78;MQ0=0;MQRankSum=-0.675;QD=25.17;ReadPosRankSum=-1.595;VQSLOD=3.1735;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,102,1041	1/1:1,7:8:12.04:151,12,0	0/0:26,0:27:53.88:0,54,522	0/0:17,0:17:35.84:0,36,329	0/0:18,0:18:27.05:0,27,275	0/0:15,0:15:45.10:0,45,459	0/0:24,0:24:69.12:0,69,688	1/1:3,25:28:63.10:718,63,0	0/0:24,0:24:60.13:0,60,612	0/0:29,0:29:81.18:0,81,826	0/0:23,0:23:63.14:0,63,642	0/0:18,0:18:51.12:0,51,519	0/0:19,0:19:57.13:0,57,582	0/0:17,0:17:48.07:0,48,476	0/0:32,0:32:90.20:0,90,918	0/0:39,0:39:99:0,117,1186	1/1:2,24:26:66.21:830,66,0	0/0:13,0:13:36.08:0,36,367	0/0:16,0:16:42.05:0,42,418	0/0:17,0:17:51.12:0,51,520	0/0:30,0:30:87.16:0,87,878	0/0:17,0:17:42.10:0,42,428	0/0:14,0:14:36.05:0,36,353	0/0:14,0:14:39.07:0,39,390	0/0:29,0:29:78.17:0,78,794	0/0:26,0:26:72.16:0,72,734	0/0:33,0:33:93.19:0,93,940	0/0:1,0:1:3.01:0,3,31
chr10	59529868	.	AACAC	A	1669.39	PASS	AC=14;AF=0.269;AN=52;BaseQRankSum=1.258;DP=561;FS=3.175;HRun=0;HaplotypeScore=100.0820;InbreedingCoeff=0.7971;MQ=63.98;MQ0=12;MQRankSum=2.905;QD=12.55;ReadPosRankSum=2.094;VQSLOD=3.3413;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:8.04:0,8,820	./.	./.	0/0:23,0:19:7.17:0,7,43	0/0:23,0:24:57.09:0,57,1003	1/1:8,20:28:18.06:289,18,0	1/1:10,2:12:17.74:252,18,0	0/0:35,0:28:36.07:0,36,341	0/0:17,0:18:35.83:0,36,644	0/0:21,0:22:9.90:0,10,341	0/0:16,0:23:9:0,9,111	1/1:10,11:21:12.79:273,13,0	1/1:5,16:21:12.02:193,12,0	0/0:9,0:13:6.02:0,6,98	0/0:12,0:28:8.73:0,9,127	0/0:16,0:15:9.03:0,9,197	0/0:18,0:14:9.01:0,9,111	0/0:12,0:12:24.69:0,25,384	0/0:17,0:17:16.48:0,16,183	0/0:11,0:22:11.78:0,12,178	0/0:14,0:23:6.02:0,6,112	1/1:4,10:14:24.04:353,24,0	1/1:6,7:13:8.61:106,9,0	1/1:4,20:24:24.08:385,24,0	0/0:17,0:30:9.02:0,9,129	0/0:13,0:24:33.58:0,34,565	0/0:15,0:27:6.02:0,6,103	0/0:2,0:2:3.48:0,3,47
chr10	59531970	.	G	GGTTTGTTT	23117.44	PASS	AB=0.684;AC=51;AF=0.911;AN=56;BaseQRankSum=-0.494;DP=675;FS=0.000;HRun=0;HaplotypeScore=157.0687;InbreedingCoeff=0.6123;MQ=56.57;MQ0=6;MQRankSum=-3.595;QD=36.75;ReadPosRankSum=4.320;VQSLOD=4.0913;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:14,0:26:41.89:225,0,42	1/1:3,0:11:23.97:197,24,0	0/0:27,0:19:18.02:0,18,286	0/0:19,0:15:4.95:0,5,336	1/1:7,0:29:50.89:423,51,0	1/1:10,0:26:24.08:837,24,0	1/1:9,0:18:12.04:418,12,0	1/1:27,0:27:17.87:176,18,0	1/1:4,0:16:29.96:246,30,0	1/1:14,13:33:51.08:1797,51,0	1/1:13,9:24:30.02:992,30,0	1/1:6,0:22:21.07:732,21,0	1/1:17,1:35:21.07:732,21,0	1/1:11,6:20:21.07:850,21,0	1/1:15,10:25:27.09:1115,27,0	1/1:11,22:36:66.21:2627,66,0	1/1:13,0:29:29.69:249,30,0	1/1:4,0:15:23.95:196,24,0	1/1:16,5:21:24.08:760,24,0	1/1:10,17:34:48.13:1586,48,0	1/1:7,4:13:12.04:441,12,0	1/1:9,0:27:33.07:1012,33,0	1/1:9,1:29:39.13:1370,39,0	1/1:10,0:10:9.03:270,9,0	1/1:9,15:26:36.12:1486,36,0	1/1:10,20:35:72.19:2396,72,0	1/1:15,17:35:45.15:1859,45,0	1/1:5,1:6:3.01:124,3,0
chr10	59532833	.	A	AT	6308.91	PASS	AB=1.000;AC=25;AF=0.446;AN=56;BaseQRankSum=-13.836;DP=556;FS=0.000;HRun=10;HaplotypeScore=53.7408;InbreedingCoeff=0.9322;MQ=72.12;MQ0=0;MQRankSum=2.094;QD=23.28;ReadPosRankSum=1.777;VQSLOD=5.5200;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:41.81:0,42,335	0/0:14,0:14:35.90:0,36,289	0/1:10,0:9:2.54:3,0,81	0/0:9,0:10:14.91:0,15,115	0/0:31,0:31:74.86:0,75,611	0/0:20,0:20:50.92:0,51,419	0/0:9,0:9:20.97:0,21,172	0/0:26,0:26:68.89:0,69,564	0/0:21,0:21:53.59:0,54,425	1/1:6,25:31:50.52:731,51,0	1/1:1,15:16:45.07:467,45,0	0/0:17,0:17:44.94:0,45,369	0/0:24,0:24:50.90:0,51,415	1/1:4,16:20:42.11:448,42,0	1/1:3,32:35:90.23:960,90,0	1/1:5,14:19:36.09:384,36,0	0/0:20,0:20:50.88:0,51,411	0/0:16,0:17:46.94:0,47,369	1/1:4,18:23:56.97:583,57,0	1/1:9,28:38:86.94:874,87,0	1/1:0,5:5:12.03:128,12,0	0/0:24,0:24:68.90:0,69,564	0/0:27,0:28:16.61:0,17,429	0/0:7,0:7:11.95:0,12,95	1/1:1,11:12:30.08:320,30,0	1/1:8,30:38:65.43:868,65,0	1/1:3,17:20:42.10:448,42,0	1/1:0,4:4:9.02:96,9,0
chr10	59533460	.	TAAACA	T	1828.74	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.004;DP=589;FS=0.658;HRun=0;HaplotypeScore=108.9801;InbreedingCoeff=0.9638;MQ=63.82;MQ0=0;MQRankSum=-5.534;QD=36.57;ReadPosRankSum=-3.032;VQSLOD=2.8235;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:69.24:0,69,2047	1/1:1,9:10:21.07:422,21,0	0/0:13,0:11:11.89:0,12,347	0/0:11,0:7:12.04:0,12,283	0/0:27,0:27:72.23:0,72,2022	0/0:27,0:27:75.26:0,75,2242	0/0:10,0:10:27.08:0,27,723	1/1:5,23:28:69.22:1328,69,0	0/0:10,0:10:24.08:0,24,654	0/0:45,0:45:99:0,126,3650	0/0:33,0:33:90.31:0,90,2608	0/0:10,0:10:30.09:0,30,835	0/0:13,0:13:36.12:0,36,1079	0/0:20,0:20:57.20:0,57,1674	0/0:24,0:24:69.24:0,69,2054	0/0:28,0:28:72.25:0,72,2095	1/1:2,10:12:12.04:217,12,0	0/0:11,0:11:30.10:0,30,771	0/0:15,0:15:36.10:0,36,906	0/0:34,0:34:96.32:0,96,2678	0/0:20,0:20:54.19:0,54,1583	0/0:17,0:17:39.09:0,39,953	0/0:31,0:31:84.25:0,84,2278	0/0:16,0:16:48.16:0,48,1366	0/0:24,0:24:69.22:0,69,1927	0/0:28,0:28:81.27:0,81,2239	0/0:39,0:39:99:0,102,2792	0/0:10,0:10:30.10:0,30,904
chr10	59534495	.	GAACAAGAACAAGAACAAGAAC	G	4293.95	PASS	AB=1.000;AC=20;AF=0.357;AN=56;BaseQRankSum=-0.619;DP=531;FS=1.922;HRun=0;HaplotypeScore=258.8784;InbreedingCoeff=0.4630;MQ=57.65;MQ0=8;MQRankSum=-7.143;QD=18.67;ReadPosRankSum=3.815;VQSLOD=3.5465;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:37,0:37:56.72:57,0,2504	0/1:10,0:10:26.19:147,0,26	0/0:28,0:14:32.98:0,33,622	0/0:12,0:9:27.08:0,27,807	0/1:21,0:20:99:248,0,1592	1/1:1,14:15:15.05:682,15,0	1/1:1,18:19:3.01:174,3,0	0/1:19,0:19:60.35:60,0,78	0/0:17,0:17:21.07:0,21,1125	0/0:29,0:29:81.22:0,81,4505	0/0:19,0:19:54.01:0,54,2734	1/1:1,25:26:18.19:1041,18,0	1/1:2,12:15:15.05:868,15,0	0/0:13,0:13:28.22:0,28,1804	0/0:32,0:32:57.15:0,57,3245	0/0:16,0:15:21.75:0,22,1692	0/1:17,0:17:46.29:58,0,46	0/1:15,0:15:12.80:13,0,1241	0/0:18,0:14:37.67:0,38,2008	0/0:11,0:11:26.97:0,27,1052	0/0:40,0:40:63.11:0,63,3107	1/1:3,0:3:9.03:160,9,0	1/1:0,12:12:8.33:519,8,0	1/1:2,19:21:9.03:266,9,0	0/0:17,0:17:33.10:0,33,1903	0/0:23,0:23:68.55:0,69,3167	0/0:22,0:20:33.10:0,33,2257	0/0:4,0:4:11.97:0,12,122
chr10	59534498	.	CAAG	C	2221.69	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=3.635;DP=521;FS=1.602;HRun=0;HaplotypeScore=132.8535;InbreedingCoeff=0.8009;MQ=56.62;MQ0=9;MQRankSum=-3.715;QD=10.73;ReadPosRankSum=5.766;VQSLOD=2.8614;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,34:38:52.93:766,53,0	0/1:10,0:10:12.90:13,0,32	0/0:27,0:14:36.09:0,36,551	0/0:12,0:10:30.10:0,30,615	1/1:9,11:19:44.98:548,45,0	1/1:15,0:15:8.97:68,9,0	1/1:18,0:18:2.99:23,3,0	0/0:16,0:16:43.87:0,44,427	1/1:0,16:16:21.07:321,21,0	0/0:28,0:28:81.18:0,81,1367	0/0:19,0:18:54.17:0,54,913	1/1:26,0:26:17.49:135,17,0	1/1:13,0:13:14.94:113,15,0	0/0:14,0:14:30.08:0,30,603	0/0:32,0:32:57.14:0,57,1039	0/0:15,0:14:21.75:0,22,493	0/0:17,0:17:5.92:0,6,96	1/1:3,13:16:2.55:298,3,0	0/0:18,0:13:39.06:0,39,700	0/0:10,0:10:27.04:0,27,409	0/0:40,0:40:63.09:0,63,1069	1/1:3,0:3:8.81:53,9,0	1/1:12,0:12:8.83:68,9,0	1/1:20,0:20:2.99:23,3,0	0/0:18,0:18:33.07:0,33,571	0/0:23,0:23:69.12:0,69,1099	0/0:21,0:20:33.11:0,33,714	0/0:4,0:4:12.02:0,12,150
chr10	59534501	.	GAACAAGAACAAGAAC	G	4492.38	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=-0.499;DP=520;FS=2.386;HRun=0;HaplotypeScore=207.1089;InbreedingCoeff=0.8378;MQ=56.54;MQ0=10;MQRankSum=-5.827;QD=25.97;ReadPosRankSum=-0.836;VQSLOD=4.1243;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:18.03:0,18,1583	1/1:2,8:10:21.07:801,21,0	0/0:24,0:12:23.94:0,24,366	0/0:15,0:13:35.61:0,36,675	0/1:20,0:19:99:143,0,1022	1/1:14,0:14:15.05:409,15,0	1/1:18,0:18:3.01:109,3,0	1/1:17,0:17:51.01:595,51,0	0/0:16,0:16:21.07:0,21,736	0/0:27,0:27:40.32:0,40,2682	0/0:19,0:18:40.13:0,40,1614	1/1:25,0:25:17.91:654,18,0	1/1:12,0:13:15.05:546,15,0	0/0:15,0:15:27.06:0,27,1188	0/0:30,0:30:48.12:0,48,2088	0/0:15,0:14:21.74:0,22,1122	1/1:5,14:19:21.54:580,22,0	0/0:16,0:16:9.54:0,10,826	0/0:19,0:14:34.58:0,35,1281	0/0:10,0:10:12.04:0,12,613	0/0:36,0:36:48.92:0,49,1959	1/1:4,0:4:12.04:147,12,0	1/1:13,0:12:8.67:326,9,0	1/1:20,0:20:9.03:182,9,0	0/0:19,0:19:29.21:0,29,1210	0/0:23,0:23:46.36:0,46,1839	0/0:21,0:20:30.09:0,30,1509	0/0:4,0:4:5.93:0,6,40
chr10	59534504	.	CAAGAACAAG	C	2921.42	PASS	AB=0.989;AC=24;AF=0.429;AN=56;BaseQRankSum=0.059;DP=525;FS=0.464;HRun=0;HaplotypeScore=174.1722;InbreedingCoeff=0.6316;MQ=55.46;MQ0=10;MQRankSum=-5.786;QD=11.64;ReadPosRankSum=-4.645;VQSLOD=0.9092;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:42,0:42:99:185,0,300	1/1:10,0:10:21.03:396,21,0	0/0:19,0:9:23.78:0,24,318	0/0:17,0:15:41.62:0,42,621	0/1:20,0:20:99:218,0,204	1/1:14,0:14:15.01:235,15,0	1/1:18,0:18:3.01:63,3,0	1/1:4,17:21:62.45:580,62,0	0/0:16,0:16:20.95:0,21,186	0/0:26,0:26:40.46:0,40,1522	0/0:19,0:18:37.12:0,37,915	1/1:25,0:25:17.61:378,18,0	1/1:13,0:13:15.05:316,15,0	0/0:14,0:14:27.07:0,27,767	0/0:30,0:30:51.04:0,51,1315	0/0:15,0:14:21.73:0,22,699	1/1:19,0:19:21.36:282,21,0	0/0:16,0:16:4.12:0,4,166	0/1:21,0:16:9.03:9,0,748	0/1:9,0:9:11.85:12,0,355	0/0:35,0:35:48.92:0,49,1206	1/1:6,0:6:17.83:163,18,0	1/1:13,0:12:8.31:189,8,0	1/1:19,0:19:8.88:102,9,0	0/0:20,0:20:29.21:0,29,725	0/0:22,0:22:18.46:0,18,1019	0/0:21,0:20:30.09:0,30,951	0/0:4,0:4:5.93:0,6,40
chr10	59534516	.	C	CAAG	7953.19	PASS	AB=1.000;AC=30;AF=0.536;AN=56;BaseQRankSum=-7.507;DP=533;FS=32.087;HRun=0;HaplotypeScore=113.7688;InbreedingCoeff=0.4944;MQ=56.12;MQ0=9;MQRankSum=7.297;QD=23.81;ReadPosRankSum=0.031;VQSLOD=2.5516;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:27.19:0,27,595	0/1:10,0:10:56.69:62,0,57	0/0:17,0:9:17.87:0,18,193	0/0:17,0:15:45.06:0,45,586	0/0:22,0:21:39.93:0,40,474	0/1:14,0:14:35.34:67,0,35	0/0:19,0:19:2.92:0,3,17	0/1:23,0:23:38.66:350,0,39	0/0:18,0:18:20.71:0,21,265	1/1:2,26:30:50.80:1058,51,0	1/1:3,15:17:38.57:534,39,0	0/0:26,0:26:9:0,9,76	0/0:13,0:13:14.62:0,15,84	1/1:0,11:11:21.07:483,21,0	1/1:2,27:29:25.45:864,25,0	1/1:1,14:14:21.07:475,21,0	0/1:19,0:19:28.02:144,0,28	0/0:14,0:14:1.34:0,1,238	1/1:10,10:14:15.09:517,15,0	1/1:1,8:9:20.87:299,21,0	1/1:2,34:36:18.44:732,18,0	0/1:6,0:6:18.95:108,0,19	0/0:13,0:12:8.49:0,8,50	0/1:20,0:20:0.76:64,0,1	1/1:0,23:23:24.08:508,24,0	1/1:3,22:25:65.86:1053,66,0	1/1:0,24:23:27.09:618,27,0	1/1:1,0:1:2.96:19,3,0
chr10	59534541	.	AAC	A	99.58	PASS	AB=0.921;AC=5;AF=0.089;AN=56;BaseQRankSum=4.394;DP=573;FS=15.715;HRun=0;HaplotypeScore=135.6453;InbreedingCoeff=0.2619;MQ=61.63;MQ0=2;MQRankSum=-0.705;QD=1.28;ReadPosRankSum=6.087;VQSLOD=1.2602;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,107,972	1/1:9,1:10:5.48:56,5,0	0/0:17,0:14:41.45:0,41,489	0/0:22,0:20:60.14:0,60,861	0/0:23,0:22:54.79:0,55,492	0/0:16,0:16:6.72:0,7,113	0/0:23,0:23:32.44:0,32,336	0/1:34,4:38:93.66:94,0,241	0/0:16,0:16:36.57:0,37,295	0/0:30,0:30:50.60:0,51,888	0/0:16,0:15:44.96:0,45,525	0/0:25,0:25:26.26:0,26,186	0/0:14,0:14:20.88:0,21,143	0/0:12,0:12:30.01:0,30,386	0/0:22,0:22:39.11:0,39,577	0/0:19,0:18:29.29:0,29,430	0/1:20,4:24:54.02:54,0,116	0/0:19,0:19:47.37:0,47,467	0/0:21,0:19:37.84:0,38,544	0/0:9,0:9:19.80:0,20,282	0/0:33,0:33:47.50:0,48,632	0/1:6,0:6:5.22:5,0,86	0/0:11,0:11:16.14:0,16,127	0/0:23,0:23:22.91:0,23,275	0/0:25,0:25:29.32:0,29,463	0/0:24,0:24:20.45:0,20,550	0/0:26,0:26:57.18:0,57,728	0/0:8,0:8:21.06:0,21,237
chr10	59534812	.	CT	C	3082.05	PASS	AB=0.721;AC=29;AF=0.518;AN=56;BaseQRankSum=7.399;DP=375;FS=7.307;HRun=13;HaplotypeScore=40.3654;InbreedingCoeff=0.7278;MQ=63.97;MQ0=4;MQRankSum=1.107;QD=12.68;ReadPosRankSum=0.993;VQSLOD=3.2608;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,1:23:26.58:0,27,399	0/1:2,7:9:5.31:129,0,5	0/0:8,0:3:2.89:0,3,23	0/0:7,0:5:5.44:0,5,51	0/0:19,1:20:26.12:0,26,399	0/0:22,1:23:44.14:0,44,579	0/0:12,0:12:18.03:0,18,175	1/1:14,18:32:52.65:376,53,0	0/1:4,0:4:5.48:5,0,76	1/1:2,17:18:47.69:347,48,0	1/1:3,10:14:25.83:181,26,0	0/0:8,0:8:15.02:0,15,146	0/0:6,0:6:12.01:0,12,113	1/1:3,7:10:17.86:131,18,0	1/1:5,14:19:23.38:175,23,0	1/1:4,5:9:14.89:109,15,0	1/1:6,20:27:58.59:416,59,0	0/0:10,0:9:20.98:0,21,194	1/1:4,6:10:19.52:136,20,0	1/1:2,11:13:26.80:193,27,0	0/1:2,4:6:14.26:73,0,14	0/0:2,0:2:6.01:0,6,58	0/0:7,0:7:6.01:0,6,58	0/0:4,0:6:11.69:0,12,86	1/1:4,18:22:27.49:365,27,0	1/1:6,16:22:35.65:262,36,0	1/1:2,16:18:41.75:306,42,0	1/1:3,4:7:11.82:87,12,0
chr10	59536967	.	AT	A	1653.50	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=4.675;DP=527;FS=6.345;HRun=4;HaplotypeScore=61.6988;InbreedingCoeff=0.9976;MQ=76.16;MQ0=0;MQRankSum=-2.608;QD=28.51;ReadPosRankSum=-1.209;VQSLOD=2.7699;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:39.09:0,39,524	1/1:1,10:11:30.09:360,30,0	0/0:17,0:16:42.10:0,42,536	0/0:16,0:14:36.12:0,36,489	0/0:27,0:27:72.22:0,72,988	0/0:22,0:22:63.21:0,63,882	0/0:18,0:18:51.16:0,51,698	1/1:3,26:29:75.23:899,75,0	0/0:18,0:18:39.13:0,39,546	0/0:20,0:20:57.18:0,57,784	0/0:11,0:11:27.09:0,27,378	0/0:22,0:22:63.21:0,63,882	0/0:24,0:24:69.21:0,69,936	0/0:13,0:13:36.11:0,36,490	0/0:18,0:18:45.13:0,45,599	0/0:17,0:17:39.13:0,39,546	1/1:2,16:18:45.14:537,45,0	0/0:14,0:14:36.12:0,36,504	0/0:21,0:21:54.18:0,54,748	0/0:24,0:24:60.19:0,60,821	0/0:16,0:16:36.12:0,36,504	0/0:17,0:17:48.14:0,48,641	0/0:20,0:20:54.18:0,54,755	0/0:16,0:16:45.15:0,45,629	0/0:22,0:22:33.10:0,33,447	0/0:25,0:25:69.22:0,69,937	0/0:18,0:18:42.14:0,42,587	0/0:7,0:7:21.07:0,21,287
chr10	59536992	.	GTTT	G	778.56	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-0.199;DP=587;FS=3.472;HRun=14;HaplotypeScore=101.5311;InbreedingCoeff=0.9644;MQ=69.68;MQ0=3;MQRankSum=-4.265;QD=12.56;ReadPosRankSum=1.069;VQSLOD=2.0676;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:29:38.66:0,39,420	1/1:8,6:14:20.92:225,21,0	0/0:25,0:18:32.45:0,32,391	0/0:18,0:12:19.44:0,19,217	0/0:13,0:40:99:0,100,1201	0/0:27,0:28:61:0,61,924	0/0:15,0:17:43.38:0,43,741	1/1:15,13:29:12.85:379,13,0	0/0:11,0:22:42.04:0,42,500	0/0:7,0:24:49.19:0,49,677	0/0:3,0:16:27.91:0,28,324	0/0:16,0:17:37.36:0,37,606	0/0:15,1:23:16.01:0,16,649	0/0:7,0:11:28.28:0,28,364	0/0:5,0:19:32.85:0,33,448	0/0:5,0:16:21.05:0,21,291	1/1:7,11:19:25.59:313,26,0	0/0:8,0:15:42.03:0,42,577	0/0:9,0:12:21.06:0,21,312	0/0:5,0:33:76.52:0,77,1017	0/0:10,0:16:13.23:0,13,145	0/0:17,0:21:60.09:0,60,944	0/0:23,0:25:60.02:0,60,898	0/0:12,0:12:21.07:0,21,390	0/0:5,0:26:21.07:0,21,303	0/0:5,0:21:56.99:0,57,757	0/0:7,0:25:39.05:0,39,527	0/0:1,0:9:18.04:0,18,226
chr10	59537220	.	CT	C	1500.48	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=7.432;DP=572;FS=2.477;HRun=7;HaplotypeScore=55.7856;InbreedingCoeff=0.9998;MQ=79.12;MQ0=0;MQRankSum=-3.074;QD=24.60;ReadPosRankSum=-0.250;VQSLOD=3.8932;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:39.09:0,39,474	1/1:0,12:12:33.07:336,33,0	0/0:19,0:18:47.12:0,47,525	0/0:13,0:13:35.91:0,36,401	0/0:21,0:21:48.15:0,48,602	0/0:20,0:20:51.16:0,51,642	0/0:16,0:16:42.13:0,42,528	1/1:1,24:25:72.14:726,72,0	0/0:20,0:20:45.14:0,45,566	0/0:23,0:23:66.21:0,66,821	0/0:16,0:16:48.13:0,48,578	0/0:17,0:17:48.15:0,48,603	0/0:20,0:20:57.18:0,57,717	0/0:24,0:24:69.21:0,69,855	0/0:21,0:21:57.18:0,57,717	0/0:20,0:20:54.17:0,54,679	1/1:4,20:24:57.13:581,57,0	0/0:27,0:26:78.19:0,78,941	0/0:14,0:14:39.12:0,39,491	0/0:33,0:33:84.26:0,84,1043	0/0:17,0:17:51.16:0,51,642	0/0:25,0:25:69.19:0,69,827	0/0:20,0:19:48.15:0,48,604	0/0:16,0:16:48.15:0,48,604	0/0:17,0:16:48.15:0,48,604	0/0:28,0:28:72.23:0,72,906	0/0:32,0:32:96.29:0,96,1190	0/0:16,0:16:42.13:0,42,525
chr10	59537500	.	CTCTTTCTTTCTT	C	786.47	PASS	AB=1.000;AC=8;AF=0.154;AN=52;BaseQRankSum=3.612;DP=459;FS=2.362;HRun=0;HaplotypeScore=204.9829;InbreedingCoeff=0.3257;MQ=47.05;MQ0=18;MQRankSum=-3.108;QD=7.71;ReadPosRankSum=-2.524;VQSLOD=2.3642;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:12,0:11:5.87:135,0,6	./.	0/0:9,0:5:3.01:0,3,33	0/0:17,0:8:2.98:0,3,41	1/1:2,17:19:9.03:157,9,0	0/0:22,0:19:39.11:0,39,800	0/0:10,0:7:8.99:0,9,131	0/0:1,0:1:0:0,0,0	1/1:9,0:8:18.05:377,18,0	0/1:21,0:21:36.54:37,0,807	0/0:24,0:21:47.28:0,47,1076	0/0:12,0:12:2.09:0,2,489	0/0:21,0:19:12.14:0,12,731	0/0:14,0:14:24.08:0,24,638	0/0:20,0:20:14.18:0,14,748	0/1:27,0:26:19.01:19,0,742	./.	0/1:14,0:11:99:198,0,181	0/0:22,0:18:22.74:0,23,589	0/0:24,0:24:54.14:0,54,1399	0/0:20,0:20:38.65:0,39,762	0/0:16,0:14:30.10:0,30,842	0/0:14,0:13:24.07:0,24,656	0/0:17,0:13:23.09:0,23,460	0/0:22,0:21:8.97:0,9,528	0/0:30,0:30:59.61:0,60,1196	0/0:27,0:27:41.30:0,41,1127	0/0:13,0:13:23.94:0,24,225
chr10	59537520	.	TTCTTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	T	5322.62	PASS	AB=0.983;AC=17;AF=0.340;AN=50;BaseQRankSum=5.417;DP=418;FS=0.491;HRun=0;HaplotypeScore=441.3258;InbreedingCoeff=-0.5852;MQ=41.35;MQ0=25;MQRankSum=-6.277;QD=16.33;ReadPosRankSum=-6.547;VQSLOD=0.9930;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:14,0:13:19.43:19,0,468	./.	0/0:3,0:1:3.01:0,3,50	0/0:5,0:1:3.01:0,3,68	0/0:20,0:20:24.08:0,24,959	0/1:21,0:18:99:253,0,1347	0/0:10,0:6:9.03:0,9,314	./.	0/0:16,0:15:35.19:0,35,1472	0/1:15,8:22:99:499,0,960	0/1:25,0:22:99:393,0,1400	0/1:11,0:11:97.43:97,0,1120	0/1:18,0:15:99:191,0,1492	0/1:10,0:10:99:270,0,832	0/1:16,0:16:99:337,0,634	0/1:26,0:24:99:1142,0,971	./.	0/0:14,0:11:1.91:0,2,1340	0/1:17,0:15:99:259,0,533	0/1:24,0:24:99:468,0,2104	0/1:14,0:14:99:110,0,572	0/1:16,0:13:88.50:88,0,2171	0/1:13,0:12:99:154,0,994	0/0:14,0:10:16.83:0,17,1083	0/1:19,0:17:99:629,0,1428	0/1:26,0:26:99:194,0,2697	0/1:32,0:32:99:219,0,2623	0/0:6,0:5:4.18:0,4,132
chr10	59537558	.	C	CTT	3495.89	PASS	AB=1.000;AC=31;AF=0.620;AN=50;BaseQRankSum=3.643;DP=359;FS=0.521;HRun=1;HaplotypeScore=169.6954;InbreedingCoeff=-0.2220;MQ=42.43;MQ0=28;MQRankSum=-1.723;QD=10.28;ReadPosRankSum=1.261;VQSLOD=0.3956;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:14:4.74:159,5,0	./.	0/0:5,0:2:3:0,3,26	0/0:4,0:3:5.61:0,6,52	0/1:19,0:19:24.86:149,0,25	1/1:20,0:17:32.76:246,33,0	1/1:5,4:6:7.26:86,7,0	./.	0/1:15,0:14:56.03:94,0,56	0/1:18,0:17:8.90:117,0,9	0/1:19,0:16:1.83:166,0,2	0/1:9,0:9:58.36:58,0,64	0/1:18,0:17:86.50:165,0,86	0/1:10,0:10:43.43:77,0,43	1/1:12,0:12:26.94:233,27,0	1/1:21,0:19:8.80:339,9,0	./.	0/1:12,0:11:50.61:51,0,58	1/1:7,0:7:1.17:108,1,0	0/1:18,0:18:26.65:123,0,27	1/1:6,0:5:8.24:65,8,0	1/1:14,0:11:8.78:127,9,0	1/1:14,2:14:31.59:271,32,0	0/0:6,0:3:2.91:0,3,41	0/1:20,0:18:3.57:274,0,4	0/1:23,0:23:12.99:241,0,13	0/1:31,0:30:38.03:308,0,38	0/1:9,0:6:28.09:38,0,28
chr10	59538827	.	G	GTGTCTA	10591.75	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=13.871;DP=690;FS=0.743;HRun=0;HaplotypeScore=195.0526;InbreedingCoeff=0.9649;MQ=73.44;MQ0=0;MQRankSum=-15.193;QD=36.40;ReadPosRankSum=-0.149;VQSLOD=4.1989;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:18,1:19:30.09:561,30,0	1/1:20,0:20:42.61:974,43,0	0/0:46,0:39:54.22:0,54,1141	0/0:32,0:28:38.99:0,39,626	1/1:20,0:20:21.06:369,21,0	1/1:17,0:17:42.14:897,42,0	1/1:22,0:22:42.10:1000,42,0	1/1:44,0:44:60.18:1354,60,0	1/1:27,0:27:63.22:1377,63,0	0/0:25,0:25:66.21:0,66,1300	0/0:16,0:16:30.09:0,30,595	1/1:29,0:29:57.20:1438,57,0	1/1:29,0:29:54.18:1403,54,0	0/0:29,0:29:63.22:0,63,1316	0/0:44,0:44:99:0,99,2086	0/0:29,0:29:69.24:0,69,1457	1/1:7,1:7:6:93,6,0	1/1:7,3:10:12.03:275,12,0	0/0:16,0:16:33.09:0,33,574	0/0:23,0:23:36.07:0,36,680	0/0:41,0:41:90.29:0,90,1803	1/1:15,0:15:24.07:439,24,0	1/1:19,0:19:18.03:294,18,0	1/1:12,0:12:6.02:120,6,0	0/0:27,0:26:66.16:0,66,1274	0/0:26,0:26:63.15:0,63,1166	0/0:32,0:32:84.29:0,84,1766	0/0:13,0:13:30.10:0,30,631
chr10	59538845	.	ATGT	A	6568.13	PASS	AB=0.703;AC=19;AF=0.339;AN=56;BaseQRankSum=15.361;DP=711;FS=2.446;HRun=0;HaplotypeScore=168.3615;InbreedingCoeff=0.2811;MQ=64.22;MQ0=4;MQRankSum=-16.221;QD=23.63;ReadPosRankSum=-5.353;VQSLOD=3.7628;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,12:18:16.91:483,17,0	1/1:5,16:21:39.05:635,39,0	0/0:66,0:40:78.91:0,79,1564	0/0:36,0:23:56.42:0,56,808	0/1:4,14:18:82.79:319,0,83	1/1:1,14:15:42.14:683,42,0	0/1:16,12:28:99:470,0,410	0/1:24,16:40:99:627,0,744	0/1:7,21:28:99:892,0,120	0/0:29,0:29:87.28:0,87,1526	0/0:14,0:14:39.11:0,39,681	1/1:6,21:27:55.05:846,55,0	1/1:2,19:21:54.17:788,54,0	0/0:27,0:27:81.21:0,81,1410	0/0:38,0:38:99:0,114,2098	0/0:34,0:34:90.31:0,90,1621	0/1:6,0:5:40.85:41,0,81	0/1:10,1:11:73.20:73,0,246	0/0:15,0:15:45.15:0,45,789	0/0:16,0:16:40.47:0,40,697	0/0:48,0:48:99:0,132,2307	0/1:5,12:17:68.89:369,0,69	0/1:7,9:16:76.57:250,0,77	0/1:5,7:12:46.35:91,0,46	0/0:28,0:27:72.11:0,72,1234	0/0:30,0:30:90.17:0,90,1561	0/0:37,0:36:98.77:0,99,1797	0/0:15,0:15:38.63:0,39,696
chr10	59538848	.	T	TCTA	6726.53	PASS	AB=0.976;AC=19;AF=0.339;AN=56;BaseQRankSum=15.621;DP=725;FS=3.962;HRun=0;HaplotypeScore=182.7493;InbreedingCoeff=0.2811;MQ=62.27;MQ0=9;MQRankSum=-16.406;QD=23.94;ReadPosRankSum=-5.824;VQSLOD=3.1647;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:16:16.91:483,17,0	1/1:21,0:21:39.65:636,40,0	0/0:66,0:38:78.91:0,79,1564	0/0:35,0:22:56.42:0,56,808	0/1:20,0:20:82.79:319,0,83	1/1:15,0:15:43.39:687,43,0	0/1:28,0:27:99:470,0,410	0/1:37,0:37:99:645,0,741	0/1:28,0:28:99:893,0,119	0/0:30,0:30:90.19:0,90,1569	0/0:15,0:15:39.11:0,39,681	1/1:29,0:28:58.70:896,59,0	1/1:24,0:24:58.98:805,59,0	0/0:29,0:29:84.15:0,84,1428	0/0:42,0:42:99:0,117,2116	0/0:33,0:33:90.30:0,90,1621	0/1:6,0:5:78.39:88,0,78	0/1:10,1:10:73.20:73,0,246	0/0:15,0:15:45.15:0,45,789	0/0:19,0:17:44.26:0,44,715	0/0:48,2:50:99:0,138,2342	0/1:18,0:18:66.10:391,0,66	0/1:15,0:15:76.72:250,0,77	0/1:11,2:12:46.35:91,0,46	0/0:29,0:29:78.05:0,78,1302	0/0:31,0:31:93.11:0,93,1579	0/0:35,0:34:99:0,100,1799	0/0:15,0:15:38.67:0,39,695
chr10	59538875	.	TCTA	T	193.01	PASS	AB=0.852;AC=4;AF=0.071;AN=56;BaseQRankSum=5.847;DP=736;FS=3.783;HRun=0;HaplotypeScore=173.0542;InbreedingCoeff=-0.1065;MQ=50.41;MQ0=75;MQRankSum=-2.957;QD=1.86;ReadPosRankSum=-3.718;VQSLOD=1.0719;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:17:16.78:0,17,239	0/0:19,1:18:17.13:0,17,213	0/1:24,0:9:58.41:58,0,87	0/1:15,0:5:15.74:16,0,26	0/0:26,1:23:20.93:0,21,312	0/0:12,12:15:7.25:0,7,76	0/0:25,1:23:19.80:0,20,486	0/0:32,1:20:0.70:0,1,769	0/0:27,1:27:23.92:0,24,527	0/0:34,0:24:72.25:0,72,1206	0/0:19,0:15:33.03:0,33,545	0/1:20,14:30:86.93:87,0,127	0/1:16,12:25:99:139,0,177	0/0:32,0:32:78.27:0,78,1300	0/0:51,0:51:99:0,123,2019	0/0:36,0:36:84.20:0,84,1383	0/0:8,1:7:5.81:0,6,72	0/0:14,0:12:25.33:0,25,382	0/0:16,0:12:36.12:0,36,585	0/0:26,0:19:42.77:0,43,656	0/0:49,0:44:99:0,105,1750	0/0:16,5:18:5.49:0,5,99	0/0:14,3:15:7.75:0,8,105	0/0:13,2:12:5.98:0,6,94	0/0:26,0:24:43.52:0,44,895	0/0:46,0:32:96.33:0,96,1602	0/0:35,0:34:96.33:0,96,1565	0/0:10,0:9:25.33:0,25,423
chr10	59539118	.	TGGGG	T	104.85	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=3.877;DP=636;FS=3.463;HRun=4;HaplotypeScore=108.9532;InbreedingCoeff=0.8115;MQ=72.68;MQ0=0;MQRankSum=-2.125;QD=14.98;ReadPosRankSum=0.033;VQSLOD=-0.2890;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,117,3229	1/1:0,1:1:3.01:43,3,0	0/0:10,0:10:27.07:0,27,689	0/0:22,0:21:57.17:0,57,1458	0/0:33,0:33:93.32:0,93,2654	0/0:20,0:20:60.21:0,60,1661	0/0:17,0:17:51.16:0,51,1381	1/1:1,0:1:3:28,3,0	0/0:22,0:22:66.23:0,66,1848	0/0:34,0:34:96.32:0,96,2662	0/0:34,0:34:99:0,102,2820	0/0:31,0:31:93.31:0,93,2608	0/0:40,0:40:99:0,117,3292	0/0:27,0:27:81.28:0,81,2297	0/0:31,0:31:93.31:0,93,2555	0/0:20,0:20:60.21:0,60,1729	1/1:1,4:5:12.02:150,12,0	0/0:3,0:3:6.02:0,6,148	0/0:19,0:19:57.18:0,57,1531	0/0:26,0:26:78.27:0,78,2223	0/0:27,0:27:78.27:0,78,2251	0/0:21,0:21:63.22:0,63,1813	0/0:24,0:24:72.25:0,72,2081	0/0:15,0:15:45.15:0,45,1259	0/0:29,0:29:87.30:0,87,2485	0/0:34,0:34:99:0,99,2696	0/0:41,0:41:99:0,123,3449	0/0:8,0:8:24.08:0,24,696
chr10	59539123	.	ATGATGTTATATCCCCTTAGTCC	A	636.64	PASS	AC=4;AF=0.074;AN=54;BaseQRankSum=4.005;DP=637;FS=9.390;HRun=0;HaplotypeScore=362.8895;InbreedingCoeff=0.7541;MQ=72.01;MQ0=0;MQRankSum=-2.458;QD=127.33;ReadPosRankSum=0.368;VQSLOD=2.2922;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,117,10569	1/1:0,1:1:3.01:169,3,0	0/0:10,0:10:1.10:0,1,2031	0/0:21,0:20:60.17:0,60,4435	0/0:34,0:34:99:0,102,10150	0/0:19,0:19:54.19:0,54,5097	0/0:16,0:16:48.16:0,48,4253	./.	0/0:25,0:25:69.24:0,69,5895	0/0:34,0:34:99:0,99,10096	0/0:34,0:34:99:0,102,10137	0/0:32,0:32:96.33:0,96,9341	0/0:40,0:40:99:0,117,11270	0/0:28,0:28:84.29:0,84,8386	0/0:30,0:30:87.30:0,87,8780	0/0:21,0:21:63.22:0,63,6692	1/1:0,4:4:12.04:570,12,0	0/0:3,0:3:9.03:0,9,875	0/0:19,0:19:57.20:0,57,4827	0/0:27,0:27:81.26:0,81,7844	0/0:29,0:29:87.30:0,87,8626	0/0:22,0:22:66.21:0,66,6108	0/0:24,0:24:72.23:0,72,6377	0/0:13,0:13:39.13:0,39,3996	0/0:29,0:29:87.26:0,87,7391	0/0:32,0:32:93.32:0,93,9296	0/0:41,0:41:99:0,123,11620	0/0:8,0:8:24.08:0,24,2208
chr10	59539243	.	GTATGTACAGATA	G	35189.21	PASS	AC=44;AF=0.815;AN=54;BaseQRankSum=10.095;DP=527;FS=0.519;HRun=0;HaplotypeScore=281.7826;InbreedingCoeff=0.9204;MQ=51.99;MQ0=0;MQRankSum=-8.105;QD=77.51;ReadPosRankSum=5.098;VQSLOD=3.7404;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,18:32:51.17:1738,51,0	0/0:18,0:18:36.12:0,36,2016	0/0:10,0:10:16.66:0,17,459	0/0:8,0:8:12.93:0,13,290	1/1:2,20:22:51.18:1854,51,0	1/1:4,18:21:51.18:1893,51,0	1/1:9,8:17:27.09:873,27,0	0/0:22,0:22:63.22:0,63,3187	1/1:8,8:16:29.68:920,30,0	1/1:10,21:31:89.40:2758,89,0	1/1:2,17:19:54.17:1896,54,0	1/1:0,20:20:57.20:2094,57,0	1/1:4,14:17:42.14:1474,42,0	1/1:7,16:23:48.16:1749,48,0	1/1:9,21:30:62.69:2125,63,0	1/1:7,11:18:39.09:1236,39,0	0/0:15,0:15:39.13:0,39,2288	./.	1/1:8,10:18:54.19:1681,54,0	1/1:3,23:25:66.21:2331,66,0	1/1:4,7:11:6.02:223,6,0	1/1:5,14:19:45.14:1576,45,0	1/1:4,17:21:48.16:1678,48,0	1/1:5,2:7:6:134,6,0	1/1:6,21:27:66.22:2289,66,0	1/1:8,15:23:58.50:1942,58,0	1/1:10,21:31:81.68:2655,82,0	1/1:3,0:3:6:71,6,0
chr10	59539252	.	GA	G	1597.48	PASS	AB=0.983;AC=39;AF=0.750;AN=52;BaseQRankSum=13.767;DP=457;FS=3.233;HRun=1;HaplotypeScore=297.5153;InbreedingCoeff=0.4621;MQ=65.05;MQ0=0;MQRankSum=-8.549;QD=4.10;ReadPosRankSum=10.102;VQSLOD=-0.6366;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:22:17.42:86,17,0	0/0:14,0:14:36.12:0,36,574	0/0:14,0:14:27.99:0,28,343	0/1:10,1:11:10.17:10,0,157	1/1:21,0:21:12.43:81,12,0	1/1:19,0:19:35.99:116,36,0	1/1:9,0:9:15.18:48,15,0	0/0:26,0:26:78.26:0,78,1226	1/1:9,0:9:15.60:49,16,0	0/1:25,0:25:44.08:81,0,44	1/1:17,0:17:34.08:112,34,0	1/1:20,0:20:26.65:110,27,0	0/1:18,0:18:14.33:52,0,14	1/1:18,1:19:34.09:124,34,0	1/1:27,1:28:41.77:149,42,0	1/1:15,0:15:13.72:60,14,0	0/0:13,0:13:39.13:0,39,622	./.	0/1:16,0:16:32.54:33,0,102	1/1:27,0:26:25.70:117,26,0	1/1:7,0:7:4.59:15,5,0	1/1:16,0:16:30.11:97,30,0	1/1:19,0:19:10.46:74,10,0	1/1:2,0:2:2.37:8,2,0	1/1:26,0:26:18.74:106,19,0	0/1:17,0:17:4.12:65,0,4	1/1:25,2:27:20.93:178,21,0	./.
chr10	59539261	.	AC	A	13242.60	PASS	AB=1.000;AC=45;AF=0.833;AN=54;BaseQRankSum=11.994;DP=537;FS=5.380;HRun=2;HaplotypeScore=264.6446;InbreedingCoeff=0.7429;MQ=67.08;MQ0=0;MQRankSum=-7.578;QD=28.42;ReadPosRankSum=5.886;VQSLOD=3.8198;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,26:27:51.16:627,51,0	0/0:15,0:15:27.09:0,27,404	0/1:15,0:15:37.12:37,0,371	0/0:15,0:15:6.33:0,6,145	1/1:0,26:26:54.17:658,54,0	1/1:0,21:21:54.17:665,54,0	1/1:0,17:17:24.08:296,24,0	0/0:28,0:28:84.24:0,84,1214	1/1:0,12:12:33.11:414,33,0	1/1:0,29:29:87.28:1106,87,0	1/1:0,18:18:51.16:615,51,0	1/1:0,24:24:63.20:777,63,0	1/1:0,21:21:57.13:705,57,0	1/1:0,18:18:45.14:545,45,0	1/1:0,28:28:60.19:736,60,0	1/1:1,17:18:39.12:483,39,0	0/0:13,0:13:39.13:0,39,583	1/1:0,1:1:3.01:39,3,0	1/1:0,20:20:60.19:768,60,0	1/1:0,29:28:72.22:879,72,0	1/1:0,10:10:6.02:73,6,0	1/1:0,20:20:45.14:548,45,0	1/1:0,24:24:48.15:583,48,0	1/1:0,6:6:3.48:36,3,0	1/1:0,30:30:69.22:853,69,0	1/1:0,22:22:66.21:838,66,0	1/1:0,30:30:78.24:961,78,0	./.
chr10	59541676	.	G	GTT	2369.12	PASS	AB=0.519;AC=19;AF=0.339;AN=56;BaseQRankSum=7.294;DP=741;FS=2.510;HRun=10;HaplotypeScore=111.0456;InbreedingCoeff=0.8980;MQ=76.05;MQ0=8;MQRankSum=-0.137;QD=10.35;ReadPosRankSum=-0.322;VQSLOD=1.6655;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:41:74.30:0,74,911	1/1:10,0:10:12.02:158,12,0	0/0:49,0:29:18.64:0,19,298	0/0:43,0:30:25.27:0,25,253	0/0:26,0:32:48.21:0,48,563	1/1:1,2:24:42.94:185,43,0	0/1:2,1:28:7.05:149,0,7	1/1:7,13:27:53.51:571,54,0	0/0:21,2:23:6.31:0,6,416	0/0:26,0:26:59.82:0,60,583	0/0:27,0:28:68.77:0,69,670	1/1:8,1:30:37.94:154,38,0	1/1:7,1:22:23.28:112,23,0	0/0:22,0:23:62.83:0,63,612	0/0:32,0:33:74.83:0,75,737	0/0:31,0:36:68.77:0,69,714	1/1:3,25:30:54.17:853,54,0	0/0:15,0:15:39.06:0,39,396	0/0:22,0:22:54.55:0,55,540	0/0:25,0:25:54.04:0,54,543	0/0:26,0:26:27.68:0,28,640	1/1:0,1:17:38.29:178,38,0	1/1:2,1:22:27.94:149,28,0	1/1:5,0:19:11.14:71,11,0	0/0:25,0:25:63.09:0,63,639	0/0:34,0:34:72:0,72,716	0/0:22,0:24:49.07:0,49,641	0/0:3,0:3:9.02:0,9,92
chr10	59541826	.	AT	A	3884.28	PASS	AB=0.833;AC=21;AF=0.375;AN=56;BaseQRankSum=10.836;DP=650;FS=3.411;HRun=11;HaplotypeScore=72.7915;InbreedingCoeff=0.8912;MQ=68.60;MQ0=0;MQRankSum=-0.165;QD=15.85;ReadPosRankSum=3.067;VQSLOD=4.6236;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,1:41:80.50:0,81,1017	1/1:1,8:9:23.97:197,24,0	0/0:11,0:11:18.01:0,18,181	0/0:13,0:12:4.58:0,5,180	0/0:26,1:31:56.11:0,56,738	1/1:4,18:22:44.94:369,45,0	1/1:1,17:20:46.02:357,46,0	1/1:9,24:33:36.84:507,37,0	0/0:22,0:23:59.99:0,60,606	0/0:33,0:33:84.18:0,84,870	0/0:28,0:28:75.12:0,75,765	1/1:3,26:29:71.91:591,72,0	1/1:3,19:22:44.90:369,45,0	0/0:13,0:15:35.92:0,36,360	0/0:27,0:27:75.13:0,75,776	0/0:25,1:26:32.47:0,32,537	1/1:1,20:21:53.92:443,54,0	0/0:7,0:7:15.01:0,15,150	0/0:19,0:21:32.07:0,32,356	0/0:32,1:35:68.25:0,68,872	0/0:29,0:29:75.14:0,75,771	1/1:6,12:18:8.84:269,9,0	1/1:4,23:27:22.89:389,23,0	1/1:4,19:24:43.97:351,44,0	0/1:15,4:20:41.57:42,0,406	0/0:25,0:25:60.14:0,60,633	0/0:30,1:30:59.54:0,60,824	0/0:9,0:9:27.05:0,27,280
chr10	59542135	.	AATAC	A	4869.61	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=12.628;DP=561;FS=7.929;HRun=0;HaplotypeScore=92.8111;InbreedingCoeff=0.9789;MQ=74.69;MQ0=0;MQRankSum=-3.223;QD=40.24;ReadPosRankSum=3.033;VQSLOD=4.9252;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:33.11:0,33,864	0/0:5,0:5:9.03:0,9,235	0/0:14,0:14:33.11:0,33,727	0/0:12,0:12:25.51:0,26,448	0/0:32,0:32:96.33:0,96,2460	1/1:1,34:35:93.32:1691,93,0	1/1:0,7:7:18.06:327,18,0	0/0:28,0:28:75.25:0,75,1849	0/0:20,0:20:54.17:0,54,1353	0/0:40,0:40:99:0,108,2745	0/0:36,0:36:99:0,99,2367	1/1:1,18:19:42.14:761,42,0	1/1:4,15:19:30.10:545,30,0	0/0:18,0:18:54.19:0,54,1384	0/0:25,0:25:63.19:0,63,1512	0/0:31,0:31:81.28:0,81,2048	0/0:13,0:13:33.10:0,33,786	0/0:12,0:12:30.10:0,30,782	0/0:16,0:16:45.14:0,45,1055	0/0:26,0:26:78.27:0,78,2031	0/0:23,0:23:66.23:0,66,1693	1/1:0,13:13:33.07:535,33,0	1/1:0,17:18:45.04:738,45,0	1/1:2,8:10:15.05:273,15,0	0/0:17,0:17:48.15:0,48,1174	0/0:25,0:24:72.25:0,72,1813	0/0:29,0:29:78.27:0,78,1993	0/0:4,0:4:12:0,12,256
chr10	59542598	.	A	AT	1013.01	PASS	AB=0.538;AC=5;AF=0.089;AN=56;BaseQRankSum=-5.053;DP=396;FS=21.002;HRun=10;HaplotypeScore=40.9424;InbreedingCoeff=0.7767;MQ=78.58;MQ0=0;MQRankSum=-1.478;QD=20.67;ReadPosRankSum=-2.922;VQSLOD=1.7471;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:25:51.52:0,52,503	0/1:1,6:7:3.59:165,0,4	0/0:13,0:13:26.16:0,26,191	0/0:12,0:12:19.84:0,20,153	0/0:23,0:24:64.95:0,65,523	0/0:20,0:20:47.92:0,48,391	0/0:12,0:12:29.56:0,30,232	1/1:4,19:23:54.06:540,54,0	0/0:11,0:11:26.95:0,27,222	0/0:16,0:16:38.94:0,39,319	0/0:14,0:15:29.02:0,29,245	0/0:9,0:9:17.97:0,18,148	0/0:10,0:10:26.97:0,27,222	0/0:10,0:10:23.96:0,24,197	0/0:17,0:17:47.94:0,48,394	0/0:11,0:11:26.94:0,27,222	1/1:4,15:19:42.08:437,42,0	0/0:6,0:6:11.98:0,12,99	0/0:14,0:15:32:0,32,252	0/0:20,0:21:58.97:0,59,474	0/0:7,0:7:20.98:0,21,172	0/0:12,0:12:35.96:0,36,296	0/0:7,0:7:20.98:0,21,172	0/0:7,0:7:20.98:0,21,172	0/0:17,1:18:15.94:0,16,335	0/0:19,0:19:53.92:0,54,443	0/0:25,1:26:36.92:0,37,509	0/0:3,0:3:3.47:0,3,25
chr10	59543035	.	TA	T	1044.76	PASS	AB=0.980;AC=8;AF=0.143;AN=56;BaseQRankSum=7.389;DP=530;FS=2.977;HRun=12;HaplotypeScore=59.2675;InbreedingCoeff=0.6799;MQ=72.23;MQ0=2;MQRankSum=1.340;QD=8.63;ReadPosRankSum=0.812;VQSLOD=2.5418;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:57.05:0,57,556	1/1:0,13:13:32.87:255,33,0	0/1:31,0:21:7.82:8,0,137	0/0:19,0:13:5.67:0,6,116	0/0:19,0:20:47.91:0,48,458	0/0:13,0:13:39.08:0,39,396	0/0:11,0:11:30.06:0,30,304	1/1:4,31:35:58.14:619,58,0	0/0:17,1:18:27.76:0,28,435	0/0:32,0:32:81.04:0,81,796	0/0:23,0:24:62.92:0,63,605	0/0:18,0:18:42.03:0,42,414	0/0:15,0:15:36.05:0,36,358	0/0:14,0:15:38.77:0,39,364	0/1:22,1:24:11.91:12,0,380	0/0:15,0:16:35.25:0,35,385	1/1:1,16:17:38.81:302,39,0	0/0:10,0:10:15.01:0,15,144	0/0:27,0:27:57.05:0,57,559	0/0:18,0:19:41.80:0,42,366	0/0:12,1:13:9.76:0,10,262	0/0:13,0:13:30.06:0,30,304	0/0:15,1:16:21.82:0,22,382	0/0:12,1:13:9.81:0,10,272	0/0:12,0:12:32.37:0,32,300	0/0:22,0:22:54.11:0,54,548	0/0:27,0:27:56.24:0,56,641	0/0:10,0:10:21.04:0,21,213
chr10	59544285	.	C	CAAAAA	12168.58	PASS	AB=0.867;AC=47;AF=0.839;AN=56;BaseQRankSum=-7.307;DP=578;FS=0.000;HRun=8;HaplotypeScore=100.1774;InbreedingCoeff=0.6015;MQ=55.60;MQ0=18;MQRankSum=-3.199;QD=25.78;ReadPosRankSum=-1.272;VQSLOD=1.4896;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,18:21:22.18:511,22,0	0/1:9,0:9:6.28:17,0,6	0/0:41,0:11:2.54:0,3,92	0/0:33,0:9:8.87:0,9,97	1/1:8,11:25:49.17:901,49,0	1/1:4,0:24:38.77:409,39,0	1/1:4,0:15:21.05:220,21,0	0/1:23,0:23:1.45:1,0,8	1/1:1,9:10:9.03:225,9,0	1/1:4,21:27:62.83:1414,63,0	1/1:6,13:26:42.09:820,42,0	1/1:5,0:23:41.44:403,41,0	1/1:1,0:16:27.07:284,27,0	1/1:5,6:13:12:273,12,0	1/1:6,13:23:21.07:590,21,0	1/1:4,13:18:27.09:714,27,0	0/0:31,0:31:25.41:0,25,68	1/1:4,5:10:9:194,9,0	1/1:3,9:11:26.65:378,27,0	1/1:3,13:23:44.50:857,45,0	1/1:1,7:10:8.99:112,9,0	1/1:2,0:19:45.07:459,45,0	1/1:2,0:22:45.11:493,45,0	1/1:0,0:12:24.06:252,24,0	1/1:6,21:25:42.10:1088,42,0	1/1:7,11:18:36:623,36,0	1/1:5,24:30:21.07:601,21,0	0/1:2,4:6:4.04:331,0,4
chr10	59544293	.	A	AAC	2789.33	PASS	AB=0.966;AC=28;AF=0.500;AN=56;BaseQRankSum=6.791;DP=549;FS=14.779;HRun=0;HaplotypeScore=101.8076;InbreedingCoeff=-0.0688;MQ=57.28;MQ0=16;MQRankSum=-5.438;QD=6.82;ReadPosRankSum=11.809;VQSLOD=0.6795;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:20:2.89:3,0,62	0/1:1,8:10:2.51:364,0,3	0/0:42,0:16:29.85:0,30,262	0/0:31,0:8:3.90:0,4,86	0/1:21,0:21:35.72:36,0,133	0/1:26,0:25:20.47:50,0,20	0/1:12,0:12:10:19,0,10	1/1:2,20:22:54.11:871,54,0	0/1:12,0:11:8.06:8,0,41	0/1:26,0:26:60.76:61,0,160	0/1:23,0:23:32.68:33,0,87	1/1:19,0:19:23.05:104,23,0	1/1:16,0:16:12.26:44,12,0	0/0:15,0:15:1.52:0,2,113	0/1:18,0:18:12.81:20,0,13	1/1:16,0:15:14.35:45,14,0	1/1:0,31:32:57.20:1078,57,0	0/0:9,0:9:2.70:0,3,59	0/0:12,0:10:11.34:0,11,114	0/1:23,0:24:24.97:25,0,65	0/0:9,0:9:5.39:0,5,41	1/1:18,0:18:3.34:40,3,0	0/1:24,0:24:28.01:28,0,49	1/1:11,0:11:12.64:37,13,0	0/1:24,0:22:15.40:48,0,15	0/0:19,0:17:0.78:0,1,158	0/1:28,0:28:6.68:33,0,7	0/1:5,0:5:8.36:8,0,34
chr10	59547545	.	TTAA	T	2718.67	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=5.283;DP=553;FS=10.033;HRun=0;HaplotypeScore=104.8117;InbreedingCoeff=0.9890;MQ=68.35;MQ0=0;MQRankSum=-3.567;QD=36.25;ReadPosRankSum=-0.024;VQSLOD=4.2650;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:45.13:0,45,932	1/1:0,15:15:36.12:576,36,0	0/0:7,0:7:18.06:0,18,390	0/0:9,0:9:20.87:0,21,304	0/0:28,0:28:81.28:0,81,1762	0/0:20,0:20:51.18:0,51,1122	0/0:19,0:19:57.20:0,57,1223	1/1:4,28:32:84.25:1274,84,0	0/0:15,0:15:42.14:0,42,922	0/0:25,0:25:69.23:0,69,1470	0/0:33,0:33:96.32:0,96,2042	0/0:16,0:16:45.15:0,45,957	0/0:16,0:16:45.14:0,45,906	0/0:16,0:16:48.16:0,48,1045	0/0:20,0:20:54.19:0,54,1181	0/0:15,0:15:45.15:0,45,993	1/1:3,25:28:63.21:1012,63,0	0/0:8,0:8:24.07:0,24,486	0/0:24,0:24:63.22:0,63,1372	0/0:28,0:28:78.26:0,78,1682	0/0:11,0:11:30.09:0,30,623	0/0:14,0:14:39.13:0,39,860	0/0:27,0:27:75.26:0,75,1652	0/0:5,0:5:15.05:0,15,327	0/0:31,0:31:81.28:0,81,1690	0/0:22,0:22:57.19:0,57,1219	0/0:28,0:28:75.19:0,75,1503	0/0:24,0:24:66.23:0,66,1448
chr10	59549009	.	T	TC	2535.87	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=-5.635;DP=498;FS=86.321;HRun=1;HaplotypeScore=55.7729;InbreedingCoeff=0.7973;MQ=49.89;MQ0=27;MQRankSum=2.918;QD=12.62;ReadPosRankSum=2.870;VQSLOD=0.1929;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:41:99:0,104,767	0/0:3,0:3:8.93:0,9,68	0/0:57,0:7:10.44:0,10,73	0/0:45,0:3:2.80:0,3,13	0/0:21,0:21:43.80:0,44,296	0/0:13,0:13:23.72:0,24,164	0/0:9,0:9:23.62:0,24,156	0/0:24,0:24:60.77:0,61,424	0/0:12,0:13:32.33:0,32,238	1/1:16,0:16:27.50:259,27,0	1/1:22,0:22:47.09:370,47,0	0/0:3,0:3:5.67:0,6,36	0/0:9,0:10:14.53:0,15,102	1/1:9,0:9:21.39:141,21,0	1/1:13,0:12:31.78:186,32,0	0/1:9,0:9:7.23:110,0,7	0/0:29,0:28:53.59:0,54,303	0/0:8,0:13:14.89:0,15,124	1/1:21,0:17:3.73:232,4,0	1/1:24,1:25:16.48:322,16,0	1/1:12,0:11:3.50:92,3,0	0/0:3,0:3:5.80:0,6,33	0/0:3,0:3:5.95:0,6,44	0/0:7,0:7:14.38:0,14,89	1/1:14,0:14:32.71:253,33,0	1/1:10,18:28:23.02:327,23,0	1/1:19,0:19:31.98:291,32,0	1/1:13,0:11:15.59:161,16,0
chr10	59550790	.	A	ATT	2095.80	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-8.886;DP=511;FS=18.723;HRun=8;HaplotypeScore=59.9374;InbreedingCoeff=0.9493;MQ=73.54;MQ0=1;MQRankSum=-1.745;QD=29.11;ReadPosRankSum=-1.869;VQSLOD=1.6191;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:15:41.85:0,42,447	1/1:2,8:9:12.04:191,12,0	0/0:11,0:10:21.05:0,21,234	0/0:14,0:14:9.05:0,9,213	0/0:33,0:33:87.18:0,87,959	0/0:22,0:22:66.16:0,66,726	0/0:7,0:7:18.02:0,18,191	1/1:11,23:34:63.21:997,63,0	0/0:11,0:11:27.05:0,27,292	0/0:23,0:23:66.15:0,66,722	0/0:29,0:29:75.18:0,75,827	0/0:14,0:14:42.11:0,42,468	0/0:14,0:14:36.07:0,36,392	0/0:21,0:21:60.13:0,60,651	0/0:19,0:19:54.14:0,54,602	0/0:20,0:20:51.09:0,51,550	1/1:3,24:28:66.23:1048,66,0	0/0:6,0:6:18.05:0,18,201	0/0:18,0:18:36.08:0,36,401	0/0:27,0:27:66.15:0,66,736	0/0:7,0:7:21.06:0,21,234	0/0:13,0:13:39.09:0,39,426	0/0:15,0:15:45.12:0,45,502	0/0:5,0:5:12.03:0,12,134	0/0:25,0:25:69.16:0,69,761	0/0:23,0:23:60.12:0,60,660	0/0:31,0:31:90.20:0,90,984	0/0:16,0:16:45.11:0,45,502
chr10	59552984	.	TTACA	T	1296.36	PASS	AB=1.000;AC=25;AF=0.463;AN=54;BaseQRankSum=5.259;DP=312;FS=0.746;HRun=0;HaplotypeScore=67.2487;InbreedingCoeff=0.6620;MQ=63.59;MQ0=9;MQRankSum=-4.969;QD=9.13;ReadPosRankSum=1.597;VQSLOD=2.2207;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:19:6.02:69,6,0	./.	0/0:23,0:14:34.55:0,35,371	0/0:14,0:10:10.25:0,10,130	1/1:9,0:9:11.95:102,12,0	1/1:0,8:8:3.01:56,3,0	1/1:4,16:20:18.01:296,18,0	0/0:19,0:18:47.87:0,48,401	1/1:7,0:7:18.05:214,18,0	0/0:9,0:9:26.97:0,27,236	0/0:14,0:14:29.94:0,30,276	1/1:1,6:7:6.02:110,6,0	1/1:10,2:12:29.88:316,30,0	0/0:9,0:8:20.97:0,21,181	0/0:11,0:11:26.94:0,27,221	0/0:6,0:6:14.99:0,15,156	0/1:9,0:9:6.84:7,0,52	1/1:4,0:4:11.91:88,12,0	0/0:11,0:11:26.85:0,27,218	0/1:12,0:10:2.51:3,0,249	0/0:19,0:19:18.94:0,19,322	1/1:1,7:8:3.01:55,3,0	1/1:0,7:7:6:111,6,0	1/1:2,11:13:2.65:55,3,0	0/1:7,0:7:7.52:8,0,84	0/0:15,0:15:16.79:0,17,384	0/0:15,0:13:32.66:0,33,317	0/0:5,0:2:5.99:0,6,48
chr10	59552985	.	TACATACACACACAC	T	1201.02	PASS	AB=0.929;AC=10;AF=0.185;AN=54;BaseQRankSum=2.834;DP=307;FS=0.000;HRun=0;HaplotypeScore=110.7139;InbreedingCoeff=0.5542;MQ=63.61;MQ0=9;MQRankSum=-3.068;QD=20.36;ReadPosRankSum=0.523;VQSLOD=1.6739;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:0,18:18:6.02:249,6,0	./.	0/0:22,0:13:34.56:0,35,668	0/0:14,0:10:10.25:0,10,183	1/1:5,4:9:11.97:217,12,0	0/0:8,0:8:3.01:0,3,95	0/0:16,0:20:18.95:0,19,486	0/0:18,0:17:48.06:0,48,652	1/1:0,7:7:18.06:755,18,0	0/0:9,0:9:27.03:0,27,820	0/0:14,0:14:30.06:0,30,973	0/0:7,0:7:6.02:0,6,188	0/1:10,0:12:35.82:36,0,467	0/0:9,0:8:21.07:0,21,1039	0/0:11,0:11:26.93:0,27,759	0/0:6,0:6:15.04:0,15,650	0/1:9,0:9:8.05:8,0,52	1/1:4,0:4:11.91:88,12,0	0/0:11,0:11:26.94:0,27,446	0/0:11,0:9:27.04:0,27,838	0/0:19,0:19:41.82:0,42,1247	0/0:7,0:7:3.01:0,3,94	0/0:7,0:7:5.74:0,6,188	0/0:14,0:14:3.01:0,3,95	0/0:7,0:7:15.05:0,15,466	0/0:15,0:15:45.13:0,45,1818	0/0:14,0:12:32.45:0,32,1444	0/0:5,0:2:6.02:0,6,284
chr10	59552989	.	TAC	T	1438.46	PASS	AB=0.792;AC=41;AF=0.891;AN=46;BaseQRankSum=1.612;DP=319;FS=0.000;HRun=0;HaplotypeScore=58.3978;InbreedingCoeff=-0.0018;MQ=61.78;MQ0=12;MQRankSum=-0.497;QD=5.80;ReadPosRankSum=2.121;VQSLOD=2.2217;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:18:5.52:25,6,0	./.	./.	./.	1/1:9,0:9:2.84:14,3,0	1/1:8,0:8:2.60:10,3,0	1/1:20,0:20:16.04:71,16,0	./.	1/1:7,0:7:16.95:82,17,0	1/1:6,4:10:12.02:122,12,0	0/1:11,5:16:2.99:28,0,3	1/1:6,0:6:5.36:22,5,0	1/1:12,0:12:11.11:51,11,0	1/1:9,1:9:14.75:157,15,0	1/1:6,5:11:8.84:100,9,0	1/1:5,2:7:12.03:133,12,0	1/1:6,0:9:5.68:28,6,0	./.	0/0:10,0:10:0:0,0,0	0/1:8,3:10:36.40:38,0,36	0/1:16,2:19:32.05:69,0,32	1/1:8,0:7:2.68:11,3,0	1/1:7,0:7:5.19:20,5,0	1/1:14,0:14:2.52:10,3,0	1/1:4,3:8:5.85:47,6,0	1/1:8,8:17:12.45:201,12,0	1/1:4,10:12:21.05:233,21,0	1/1:4,2:2:6.02:67,6,0
chr10	59553153	.	AATGAAGGTGCTGTAGGAGGCCATAG	A	9327.68	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=10.993;DP=508;FS=1.942;HRun=0;HaplotypeScore=301.7692;InbreedingCoeff=0.9402;MQ=88.68;MQ0=0;MQRankSum=-9.918;QD=116.60;ReadPosRankSum=3.969;VQSLOD=4.1032;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,114,11233	0/0:6,0:6:18.05:0,18,1165	0/0:17,0:17:51.16:0,51,2621	0/0:26,0:26:78.18:0,78,5488	0/0:34,0:34:99:0,102,10143	1/1:0,13:13:24.08:1675,24,0	1/1:0,7:7:3.01:209,3,0	0/0:27,0:27:81.26:0,81,6652	0/0:10,0:10:30.10:0,30,3125	0/0:19,0:19:54.18:0,54,5301	0/0:19,0:19:57.18:0,57,5770	1/1:0,13:13:21.07:1466,21,0	1/1:0,17:17:36.12:2513,36,0	0/0:15,0:15:45.15:0,45,4791	0/0:21,0:21:63.17:0,63,5915	0/0:22,0:22:66.23:0,66,6190	0/0:21,0:20:60.21:0,60,6022	0/0:18,0:18:51.18:0,51,5700	0/0:21,0:21:62.22:0,62,5182	0/0:8,0:8:24.08:0,24,2308	0/0:21,0:21:63.20:0,63,6750	1/1:0,12:12:30.10:1934,30,0	1/1:0,9:9:18.06:1155,18,0	1/1:0,9:9:6.02:376,6,0	0/0:17,0:17:51.18:0,51,5471	0/0:21,0:21:63.21:0,63,7015	0/0:41,0:41:99:0,114,10921	0/0:5,0:5:14.98:0,15,1121
chr10	59553646	.	T	TTAAC	6345.37	PASS	AB=0.519;AC=13;AF=0.232;AN=56;BaseQRankSum=-10.168;DP=502;FS=9.927;HRun=0;HaplotypeScore=73.8324;InbreedingCoeff=0.8807;MQ=56.92;MQ0=7;MQRankSum=-0.406;QD=62.21;ReadPosRankSum=1.947;VQSLOD=6.6738;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:96.28:0,96,1702	0/0:6,0:6:18.06:0,18,331	0/0:22,0:10:15.02:0,15,238	0/0:17,0:9:17.99:0,18,294	0/0:24,0:24:66.21:0,66,1184	1/1:3,18:23:48.16:1206,48,0	1/1:6,11:17:39.13:997,39,0	0/0:31,0:31:81.26:0,81,1397	0/0:11,0:11:33.11:0,33,607	0/0:23,0:22:57.19:0,57,1012	0/0:15,0:15:45.15:0,45,828	0/1:1,11:14:19.09:832,0,19	1/1:2,12:14:35.99:937,36,0	0/0:13,0:13:39.12:0,39,688	0/0:21,0:21:63.22:0,63,1148	0/0:14,0:14:42.14:0,42,773	0/0:14,0:14:36.12:0,36,662	0/0:21,0:21:63.22:0,63,1157	0/0:28,0:27:75.26:0,75,1357	0/0:18,0:18:51.17:0,51,938	0/0:27,0:26:75.26:0,75,1361	1/1:0,5:5:15.05:396,15,0	1/1:1,7:8:21.07:554,21,0	1/1:0,21:20:54.19:1424,54,0	0/0:17,0:17:51.17:0,51,939	0/0:15,0:15:42.14:0,42,773	0/0:22,0:21:63.21:0,63,1112	0/0:3,0:3:9.03:0,9,166
chr10	59553746	.	C	CT	10024.84	PASS	AB=0.588;AC=45;AF=0.804;AN=56;BaseQRankSum=-11.637;DP=496;FS=1.664;HRun=10;HaplotypeScore=52.9518;InbreedingCoeff=0.8214;MQ=72.97;MQ0=0;MQRankSum=-1.816;QD=24.45;ReadPosRankSum=3.149;VQSLOD=5.3877;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,17:20:23.50:455,24,0	0/0:1,0:9:16.30:0,16,47	0/0:15,0:14:27.40:0,27,180	0/0:18,0:14:13.94:0,14,123	1/1:8,19:28:59.25:644,59,0	1/1:4,15:19:14.48:359,14,0	1/1:5,15:20:42.11:448,42,0	0/0:3,0:24:39.17:0,39,112	0/1:3,7:10:3.31:171,0,3	1/1:2,20:22:60.14:631,60,0	1/1:2,19:21:36.60:584,37,0	1/1:5,19:24:57.14:608,57,0	1/1:1,16:17:45.11:479,45,0	1/1:1,6:7:18.04:191,18,0	1/1:1,11:12:30.08:320,30,0	1/1:1,29:30:78.20:831,78,0	0/0:3,0:18:26.48:0,26,77	1/1:2,13:15:2.43:229,2,0	1/1:2,15:17:39.07:402,39,0	1/1:2,16:18:51.02:508,51,0	1/1:0,2:2:3.01:32,3,0	1/1:0,4:4:9.02:96,9,0	1/1:2,7:9:18.05:192,18,0	1/1:4,7:11:23.98:233,24,0	1/1:4,22:27:41.35:630,41,0	1/1:4,18:22:54.11:559,54,0	1/1:6,24:31:31.72:722,32,0	1/1:2,22:24:66.17:703,66,0
chr10	59555329	.	TTTTGTTTG	T	16476.26	PASS	AC=50;AF=0.926;AN=54;BaseQRankSum=1.478;DP=533;FS=2.036;HRun=0;HaplotypeScore=143.1893;InbreedingCoeff=0.8262;MQ=60.01;MQ0=2;MQRankSum=-1.060;QD=34.11;ReadPosRankSum=3.337;VQSLOD=4.8691;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,18:24:18.06:417,18,0	1/1:9,7:16:21.07:513,21,0	0/0:16,0:12:6.02:0,6,218	0/0:28,0:24:9.03:0,9,337	1/1:10,12:22:28.79:501,29,0	1/1:4,13:17:36.12:831,36,0	1/1:8,9:17:24.08:553,24,0	1/1:11,5:16:16.79:166,17,0	1/1:7,17:24:45.15:1102,45,0	1/1:8,15:23:42.14:1009,42,0	1/1:8,21:29:54.10:1134,54,0	1/1:1,12:13:24.08:607,24,0	1/1:8,11:19:30.10:761,30,0	1/1:4,13:17:20.70:513,21,0	1/1:7,15:22:30.10:763,30,0	1/1:3,14:17:27.09:625,27,0	1/1:4,6:10:12.04:305,12,0	1/1:6,8:14:9.03:229,9,0	1/1:10,5:14:14.91:355,15,0	1/1:6,12:18:30.10:717,30,0	./.	1/1:3,17:20:39.07:905,39,0	1/1:8,16:24:34.35:741,34,0	1/1:5,10:15:11.99:248,12,0	1/1:10,12:22:30.10:677,30,0	1/1:6,15:21:45.15:1132,45,0	1/1:11,20:31:51.18:1254,51,0	1/1:7,10:17:21.07:418,21,0
chr10	59555406	.	T	TTGTGTGTG	6209.88	PASS	AC=48;AF=0.923;AN=52;BaseQRankSum=0.951;DP=499;FS=0.000;HRun=0;HaplotypeScore=195.4818;InbreedingCoeff=0.3747;MQ=44.74;MQ0=6;MQRankSum=2.355;QD=14.58;ReadPosRankSum=2.141;VQSLOD=3.4396;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	1/1:9,0:9:9.03:277,9,0	0/0:21,0:12:9.03:0,9,160	0/0:30,0:8:2.74:0,3,12	1/1:23,1:24:2.95:25,3,0	1/1:24,1:26:15.03:380,15,0	1/1:18,0:18:15.52:297,16,0	1/1:21,0:20:12.92:273,13,0	1/1:11,0:15:11.65:279,12,0	1/1:29,0:29:30.93:754,31,0	1/1:20,0:20:3.01:47,3,0	1/1:18,2:21:14.63:408,15,0	1/1:12,1:12:12.04:375,12,0	1/1:12,0:13:5.05:78,5,0	1/1:17,0:17:7.71:46,8,0	1/1:23,0:22:23.99:530,24,0	1/1:5,0:5:6.02:128,6,0	1/1:6,0:6:3.01:49,3,0	1/1:22,0:21:10.58:131,11,0	1/1:21,0:21:9.01:166,9,0	./.	1/1:19,2:22:6.02:144,6,0	1/1:20,2:21:15.05:376,15,0	1/1:16,1:18:9.03:220,9,0	1/1:17,0:18:2.99:95,3,0	1/1:14,0:14:3.45:23,3,0	1/1:19,0:19:27.08:733,27,0	1/1:8,0:10:12.04:378,12,0
chr10	59555408	.	G	GTGTGTGTGTGTGTGTGTC	7800.37	PASS	AB=1.000;AC=38;AF=0.704;AN=54;BaseQRankSum=-0.671;DP=500;FS=0.000;HRun=0;HaplotypeScore=252.3544;InbreedingCoeff=0.0749;MQ=44.67;MQ0=7;MQRankSum=-1.918;QD=18.93;ReadPosRankSum=2.799;VQSLOD=3.3048;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	1/1:9,0:9:6.49:115,6,0	0/0:21,0:12:17.98:0,18,291	0/0:30,0:8:13.42:0,13,144	0/0:24,0:24:12.30:0,12,91	0/1:26,0:26:46.19:125,0,46	0/1:18,0:18:4.79:5,0,132	0/1:21,0:20:99:232,0,100	0/1:15,0:15:49.84:381,0,50	1/1:28,0:28:44.05:1636,44,0	1/1:20,0:20:8.98:118,9,0	0/1:21,0:21:7.51:94,0,8	0/1:13,0:12:14.55:16,0,15	1/1:12,1:13:5.75:186,6,0	1/1:16,0:16:6.64:63,7,0	1/1:21,3:23:21.07:1234,21,0	1/1:6,0:5:5.96:44,6,0	0/1:6,0:6:15.06:15,0,29	0/1:24,0:23:32.59:227,0,33	1/1:21,0:21:9.03:241,9,0	1/1:5,0:3:2.99:23,3,0	0/1:21,0:21:17.40:43,0,17	1/1:22,0:21:12.03:115,12,0	0/1:20,0:20:4.55:5,0,50	1/1:18,1:19:3.01:121,3,0	1/1:14,0:14:21.73:172,22,0	1/1:20,0:20:34.78:1751,35,0	1/1:10,0:10:17.85:838,18,0
chr10	59555424	.	G	GTC	1527.72	PASS	AB=0.950;AC=28;AF=0.500;AN=56;BaseQRankSum=3.528;DP=438;FS=5.281;HRun=0;HaplotypeScore=132.3488;InbreedingCoeff=0.3007;MQ=40.10;MQ0=12;MQRankSum=-1.453;QD=5.76;ReadPosRankSum=2.689;VQSLOD=3.0998;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:12:2.74:12,3,0	0/0:6,0:6:1.41:0,1,3	0/0:15,0:7:17.77:0,18,165	0/0:30,0:6:17.70:0,18,158	0/0:25,0:25:11.21:0,11,97	0/0:18,0:18:6.51:0,7,53	0/0:15,0:15:8.56:0,9,51	0/0:20,0:15:41.55:0,42,301	0/1:13,0:13:0.45:0,0,54	0/1:26,0:25:51.36:371,0,51	1/1:15,0:15:11.02:100,11,0	0/1:18,0:18:7.81:8,0,17	0/1:14,0:13:2.11:2,0,6	1/1:13,0:13:8.48:59,8,0	1/1:14,1:15:7.70:66,8,0	1/1:19,0:18:21.06:254,21,0	1/1:4,0:3:0.87:2,1,0	0/0:7,0:6:5.91:0,6,38	0/1:21,0:20:59.07:59,0,201	1/1:18,0:18:11.54:151,12,0	1/1:5,0:3:2.99:23,3,0	0/0:15,0:15:1.36:0,1,3	1/1:16,0:15:0.86:9,1,0	0/0:21,0:21:5.75:0,6,48	0/1:17,0:17:1.80:42,0,2	0/1:4,8:12:14.61:122,0,15	1/1:18,0:18:0.98:290,1,0	0/1:8,0:8:1.14:116,0,1
chr10	59555437	.	T	TGAGAGAGA	3984.45	PASS	AB=0.866;AC=48;AF=0.889;AN=54;BaseQRankSum=0.829;DP=442;FS=9.087;HRun=0;HaplotypeScore=182.5615;InbreedingCoeff=0.2946;MQ=36.76;MQ0=15;MQRankSum=-0.441;QD=10.30;ReadPosRankSum=-0.592;VQSLOD=1.9289;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:12,0:13:0:0,0,0	1/1:11,0:10:1.72:4,2,0	0/0:13,0:5:6.02:0,6,145	0/0:27,0:5:2.42:0,2,33	1/1:21,1:22:5.97:110,6,0	1/1:16,0:17:6.02:123,6,0	1/1:16,0:16:9.02:204,9,0	1/1:25,0:17:15.94:376,16,0	1/1:11,0:11:3.41:52,3,0	1/1:26,0:24:23.95:394,24,0	./.	1/1:19,1:20:14.60:193,15,0	0/1:10,2:11:3.55:243,0,4	1/1:15,0:16:5.05:45,5,0	1/1:16,0:17:5.94:93,6,0	1/1:17,0:16:6:52,6,0	1/1:11,0:10:15.05:341,15,0	1/1:5,0:4:8.99:149,9,0	1/1:17,0:16:9.03:240,9,0	1/1:18,1:19:7.36:100,7,0	1/1:5,0:3:2.99:24,3,0	1/1:14,0:15:3.01:75,3,0	1/1:15,0:14:3:25,3,0	1/1:19,0:19:5.68:193,6,0	1/1:20,0:20:6.02:180,6,0	1/1:6,0:6:6.02:167,6,0	1/1:19,0:19:20.98:304,21,0	1/1:12,0:12:20.99:301,21,0
chr10	59556152	.	GTC	G	8546.28	PASS	AB=1.000;AC=50;AF=0.893;AN=56;BaseQRankSum=-1.513;DP=529;FS=19.285;HRun=0;HaplotypeScore=96.0295;InbreedingCoeff=0.5870;MQ=69.44;MQ0=16;MQRankSum=-3.574;QD=18.54;ReadPosRankSum=5.162;VQSLOD=3.3912;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:26:62.87:510,63,0	1/1:4,1:5:11.99:103,12,0	0/0:35,0:18:42.05:0,42,429	0/0:33,0:13:27.87:0,28,251	1/1:13,3:16:35.97:324,36,0	1/1:13,3:16:44.36:381,44,0	1/1:21,0:20:47.76:372,48,0	1/1:14,0:14:39.43:344,39,0	0/1:16,0:16:28.95:172,0,29	1/1:21,0:21:38.28:470,38,0	1/1:0,11:11:9:81,9,0	1/1:14,4:18:39.96:411,40,0	1/1:15,4:18:47.92:403,48,0	1/1:15,5:20:20.72:193,21,0	1/1:22,2:23:57.54:502,58,0	1/1:14,4:18:50.93:434,51,0	1/1:16,3:19:36.87:361,37,0	0/1:13,0:12:5.15:175,0,5	1/1:15,0:15:36.03:330,36,0	1/1:1,20:21:3.01:44,3,0	1/1:32,0:32:83.77:676,84,0	1/1:13,4:16:41.96:355,42,0	1/1:15,3:18:41.27:339,41,0	1/1:23,1:23:35.31:298,35,0	1/1:12,4:16:44.89:382,45,0	1/1:1,16:16:44.92:372,45,0	1/1:15,3:18:47.82:397,48,0	1/1:5,0:4:14.96:120,15,0
chr10	59556153	.	TCTCACACA	T	8437.31	PASS	AB=1.000;AC=41;AF=0.732;AN=56;BaseQRankSum=-4.756;DP=518;FS=1.077;HRun=0;HaplotypeScore=144.1854;InbreedingCoeff=-0.0191;MQ=68.02;MQ0=16;MQRankSum=-2.643;QD=18.67;ReadPosRankSum=-0.672;VQSLOD=4.2983;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:25:71.47:327,0,71	1/1:5,0:5:12:158,12,0	0/0:34,0:17:42.05:0,42,429	0/0:32,0:12:27.45:0,27,250	0/1:16,0:16:99:110,0,259	1/1:16,0:16:39.44:324,39,0	0/1:19,0:18:45.07:261,0,45	0/1:14,0:14:23.12:284,0,23	0/1:16,0:16:99:149,0,622	1/1:21,0:21:33.90:416,34,0	1/1:11,0:11:9.03:247,9,0	0/1:18,0:18:42.61:386,0,43	1/1:17,0:16:45.20:412,45,0	1/1:8,11:19:20.21:573,20,0	1/1:24,0:23:41.04:570,41,0	1/1:18,0:18:48.48:639,48,0	0/1:18,0:18:35.08:35,0,485	0/1:13,0:12:99:173,0,254	1/1:13,0:13:32.47:280,32,0	1/1:21,0:21:3.01:85,3,0	1/1:32,0:32:78.74:644,79,0	0/1:17,0:16:12.98:295,0,13	0/1:19,0:19:18.60:228,0,19	1/1:23,0:22:33.86:276,34,0	1/1:16,0:16:41.91:564,42,0	1/1:17,0:16:43.12:396,43,0	1/1:18,0:18:46.64:542,47,0	0/1:5,0:4:9.89:62,0,10
chr10	59556194	.	CACACACAA	C	8548.25	PASS	AB=0.996;AC=41;AF=0.732;AN=56;BaseQRankSum=-2.418;DP=612;FS=0.000;HRun=0;HaplotypeScore=190.4541;InbreedingCoeff=-0.0225;MQ=63.55;MQ0=18;MQRankSum=-0.459;QD=15.40;ReadPosRankSum=2.499;VQSLOD=3.5655;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:31,0:31:99:247,0,141	1/1:8,0:8:19.74:203,20,0	0/0:26,0:18:40.29:0,40,428	0/0:31,0:18:47.46:0,47,528	0/1:29,0:29:99:199,0,427	1/1:21,0:21:0.66:256,1,0	0/1:23,0:22:70.36:246,0,70	0/1:21,0:19:99:247,0,141	0/1:19,0:19:99:156,0,702	1/1:24,0:23:62.69:572,63,0	1/1:13,0:13:30:423,30,0	0/1:33,0:33:27.39:464,0,27	1/1:20,0:19:20.38:211,20,0	1/1:20,1:21:47.89:766,48,0	1/1:26,0:26:58.90:789,59,0	1/1:17,1:18:44.98:608,45,0	0/1:37,0:37:99:237,0,791	0/1:12,0:11:85.73:86,0,359	1/1:22,0:22:35:326,35,0	1/1:11,0:11:17.99:207,18,0	1/1:34,0:34:60.43:558,60,0	0/1:23,1:21:47.50:144,0,48	0/1:24,0:24:34.93:35,0,49	1/1:29,0:28:19.30:231,19,0	1/1:13,1:14:32.96:496,33,0	1/1:14,0:13:26.81:284,27,0	1/1:17,0:17:41.79:500,42,0	0/1:10,0:8:10.53:58,0,11
chr10	59556196	.	CACACAA	C	9533.72	PASS	AB=1.000;AC=47;AF=0.839;AN=56;BaseQRankSum=-1.407;DP=595;FS=4.539;HRun=0;HaplotypeScore=164.9307;InbreedingCoeff=0.2663;MQ=64.75;MQ0=17;MQRankSum=-0.533;QD=17.72;ReadPosRankSum=3.142;VQSLOD=4.1439;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:31,0:31:1.65:282,2,0	1/1:7,1:8:20.30:182,20,0	0/0:26,0:19:43.26:0,43,470	0/0:31,0:19:47.72:0,48,566	0/1:30,0:30:99:258,0,157	1/1:19,0:19:31.80:505,32,0	1/1:26,0:25:50.92:484,51,0	0/1:21,0:20:65.95:271,0,66	0/1:19,0:19:99:156,0,465	1/1:23,0:22:65.92:599,66,0	1/1:9,3:12:30:343,30,0	1/1:26,2:28:56.79:654,57,0	1/1:18,1:18:20.23:363,20,0	1/1:16,5:21:50.88:620,51,0	1/1:22,2:24:68.40:746,68,0	1/1:13,3:16:47.93:518,48,0	0/1:37,0:37:99:260,0,364	0/1:12,0:11:99:108,0,252	1/1:20,0:20:36.08:327,36,0	1/1:11,1:12:23.98:236,24,0	1/1:32,0:32:61.94:542,62,0	1/1:23,0:20:12.15:216,12,0	1/1:23,0:23:4:134,4,0	1/1:31,0:30:54.05:485,54,0	1/1:10,3:13:33.02:430,33,0	1/1:12,1:12:29.95:288,30,0	1/1:13,3:16:41.86:450,42,0	1/1:9,0:8:4.19:76,4,0
chr10	59556198	.	CACAA	C	9169.14	PASS	AB=1.000;AC=49;AF=0.875;AN=56;BaseQRankSum=-1.012;DP=576;FS=26.955;HRun=0;HaplotypeScore=144.4883;InbreedingCoeff=0.4394;MQ=65.35;MQ0=17;MQRankSum=-1.446;QD=17.67;ReadPosRankSum=2.202;VQSLOD=3.0187;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:29:50.66:420,51,0	1/1:8,0:8:19.48:162,19,0	0/0:26,0:19:43.26:0,43,470	0/0:31,0:19:50.13:0,50,569	1/1:28,0:28:42.73:384,43,0	1/1:16,3:19:45.04:445,45,0	1/1:22,0:21:53.53:509,54,0	1/1:22,0:21:3.50:302,3,0	0/1:18,0:18:99:160,0,224	1/1:25,0:24:71.91:625,72,0	1/1:10,0:10:30:297,30,0	1/1:23,2:25:53.88:524,54,0	1/1:19,3:21:20.99:249,21,0	1/1:20,0:20:50.54:513,51,0	1/1:25,0:25:71.04:631,71,0	1/1:17,0:17:50.94:486,51,0	0/1:36,0:36:19.44:406,0,19	0/1:12,0:11:99:108,0,147	1/1:20,0:20:37.08:329,37,0	1/1:11,0:11:26.97:250,27,0	1/1:32,0:32:61.93:520,62,0	1/1:17,3:17:9.61:131,10,0	1/1:0,18:18:4.95:84,5,0	1/1:29,1:29:56.51:504,57,0	1/1:14,0:14:36:370,36,0	1/1:11,0:10:29.96:273,30,0	1/1:17,0:17:44.83:403,45,0	1/1:8,0:7:10.82:86,11,0
chr10	59556200	.	CAA	C	8824.21	PASS	AB=1.000;AC=50;AF=0.893;AN=56;BaseQRankSum=-0.592;DP=567;FS=14.612;HRun=4;HaplotypeScore=126.2919;InbreedingCoeff=0.5458;MQ=68.43;MQ0=14;MQRankSum=-3.564;QD=17.44;ReadPosRankSum=3.098;VQSLOD=1.5211;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:26:50.76:418,51,0	1/1:8,0:8:18.39:146,18,0	0/0:28,0:21:46.27:0,46,506	0/0:33,0:21:56.31:0,56,606	1/1:22,2:24:53.60:457,54,0	1/1:19,0:19:46.83:401,47,0	1/1:21,0:21:53.51:461,54,0	1/1:22,0:21:47.69:396,48,0	0/1:18,0:18:27.40:172,0,27	1/1:25,0:24:71.91:623,72,0	1/1:10,0:10:29.98:255,30,0	1/1:26,0:26:56.71:466,57,0	1/1:4,16:20:17.54:152,18,0	1/1:22,0:22:59.43:489,59,0	1/1:24,0:24:68.53:564,69,0	1/1:18,0:18:53.92:454,54,0	1/1:28,1:29:69.58:573,70,0	0/1:12,0:11:13.88:114,0,14	1/1:20,0:20:38.75:332,39,0	1/1:11,0:11:26.97:241,27,0	1/1:32,0:32:62.87:521,63,0	1/1:8,13:18:9.17:86,9,0	1/1:18,0:18:4.66:53,5,0	1/1:30,0:30:56.22:443,56,0	1/1:14,0:14:35.98:313,36,0	1/1:11,0:10:29.95:259,30,0	1/1:17,0:17:44.81:361,45,0	1/1:8,0:7:3.47:75,3,0
chr10	59556713	.	G	GT	161.15	PASS	AB=0.917;AC=24;AF=0.500;AN=48;BaseQRankSum=-1.443;DP=151;FS=41.555;HRun=0;HaplotypeScore=39.1373;InbreedingCoeff=0.4472;MQ=72.52;MQ0=10;MQRankSum=-1.379;QD=2.21;ReadPosRankSum=1.546;VQSLOD=0.8042;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,0:5:2.98:22,3,0	./.	0/0:12,0:6:11.74:0,12,82	0/0:13,0:3:4.46:0,4,21	0/1:6,0:6:1.51:2,0,2	0/0:1,0:1:2.74:0,3,12	1/1:16,0:15:1.92:21,2,0	0/0:3,0:3:5.98:0,6,47	0/0:2,0:2:2.03:0,2,5	1/1:3,0:3:3.97:23,4,0	1/1:2,1:3:2.37:8,2,0	0/0:10,0:10:14.22:0,14,72	0/0:7,0:7:7.77:0,8,41	0/1:4,1:5:7.70:22,0,8	0/0:3,0:1:0:0,0,0	1/1:3,0:2:1.25:3,1,0	0/0:4,0:4:10.35:0,10,54	1/1:3,0:2:3.93:12,4,0	1/1:6,0:5:12:67,12,0	1/1:4,0:4:4.53:25,5,0	./.	0/0:8,0:7:2.74:0,3,12	./.	1/1:8,0:8:0.87:2,1,0	./.	1/1:8,1:7:15.73:64,16,0	1/1:1,1:2:4.54:26,5,0	0/0:1,0:1:0.89:0,1,2
chr10	59556715	.	G	GT	78.68	PASS	AB=0.975;AC=26;AF=0.542;AN=48;BaseQRankSum=-1.238;DP=158;FS=31.635;HRun=0;HaplotypeScore=42.1745;InbreedingCoeff=0.3610;MQ=70.89;MQ0=13;MQRankSum=-1.901;QD=1.00;ReadPosRankSum=0.832;VQSLOD=0.4639;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:6,0:6:3.73:16,4,0	./.	0/0:12,0:6:11.94:0,12,109	0/0:13,0:3:4.74:0,5,22	1/1:6,0:6:4.70:21,5,0	0/0:1,0:1:2.74:0,3,12	0/0:16,0:15:1.65:0,2,12	0/0:3,0:3:2.99:0,3,24	0/0:2,0:2:3.81:0,4,19	1/1:3,0:3:7.18:43,7,0	1/1:2,1:3:2.04:6,2,0	0/0:14,0:13:15.29:0,15,77	0/0:7,0:7:8.93:0,9,43	1/1:4,1:5:6.42:30,6,0	./.	1/1:3,0:2:0.89:2,1,0	0/1:5,0:3:5.73:6,0,6	1/1:5,0:3:3.25:9,3,0	0/1:6,0:5:5.43:5,0,6	1/1:4,0:4:2.13:5,2,0	0/1:14,0:14:0:0,0,0	0/0:8,0:7:2.74:0,3,12	./.	1/1:7,0:7:0.47:1,0,0	./.	0/1:8,1:7:4.47:23,0,4	1/1:1,1:2:3.86:23,4,0	1/1:1,0:1:2.97:20,3,0
chr10	59556751	.	TGGAGGTGGCGGG	T	438.31	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=2.179;DP=187;FS=12.010;HRun=0;HaplotypeScore=64.4884;InbreedingCoeff=0.4092;MQ=74.04;MQ0=10;MQRankSum=0.078;QD=21.92;ReadPosRankSum=-0.887;VQSLOD=0.7978;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:3,0:2:3.01:0,3,62	1/1:1,0:1:3.01:58,3,0	0/0:7,0:4:12.04:0,12,252	0/0:16,0:12:19.67:0,20,502	0/0:5,0:5:6.02:0,6,239	0/0:8,0:8:21.07:0,21,475	0/0:12,0:11:24.08:0,24,692	1/1:3,8:9:24:451,24,0	0/0:4,0:4:9.92:0,10,205	0/0:6,0:6:17.73:0,18,720	0/0:5,0:5:9.03:0,9,182	0/0:16,0:17:36.37:0,36,1572	0/0:9,0:9:23.67:0,24,619	0/0:7,0:7:18.06:0,18,470	0/0:4,0:4:12.04:0,12,371	0/0:4,0:4:12.04:0,12,345	0/1:8,0:6:45.80:46,0,199	0/0:5,0:4:8.76:0,9,126	0/0:7,0:6:11.63:0,12,237	0/0:5,0:5:9.03:0,9,220	0/0:13,0:10:17.82:0,18,492	0/0:8,0:8:9.03:0,9,409	0/0:2,0:2:6.02:0,6,148	0/0:8,0:7:9.03:0,9,265	0/0:3,0:3:9.03:0,9,223	0/0:4,0:4:9.03:0,9,248	0/0:2,0:2:6.02:0,6,164	0/0:3,0:3:9.03:0,9,329
chr10	59557088	.	C	CT	1570.34	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=5.692;DP=552;FS=0.505;HRun=8;HaplotypeScore=61.8477;InbreedingCoeff=0.8423;MQ=66.18;MQ0=1;MQRankSum=1.433;QD=20.66;ReadPosRankSum=-3.236;VQSLOD=2.5264;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:68.14:0,68,629	1/1:3,5:8:18.05:206,18,0	0/1:17,0:11:0.81:1,0,48	0/0:20,0:13:2.06:0,2,99	0/0:22,0:21:60.03:0,60,548	0/0:22,0:22:63.03:0,63,576	0/0:19,0:19:45:0,45,406	1/1:4,26:32:83.29:882,83,0	0/0:13,0:13:34.46:0,34,327	0/0:36,0:36:99:0,99,906	0/0:18,0:17:45.02:0,45,411	0/0:15,0:15:39.01:0,39,356	0/0:22,0:22:43.64:0,44,488	0/0:26,0:26:65.99:0,66,596	0/0:22,0:22:57.02:0,57,521	0/0:17,0:16:42.01:0,42,384	1/1:5,14:19:54.16:622,54,0	0/0:13,0:13:39.02:0,39,357	0/0:18,0:18:44.75:0,45,396	0/0:12,0:12:33.02:0,33,301	0/0:10,0:10:27.01:0,27,247	0/0:15,0:15:42.02:0,42,384	0/0:12,0:12:29.89:0,30,256	0/0:20,0:20:48.02:0,48,439	0/0:26,0:26:72.02:0,72,651	0/0:27,0:27:71.99:0,72,646	0/0:24,0:24:66.02:0,66,601	0/0:20,0:20:21.10:0,21,336
chr10	59557182	.	C	CT	2463.24	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-12.197;DP=734;FS=1.031;HRun=3;HaplotypeScore=65.0250;InbreedingCoeff=0.9997;MQ=59.35;MQ0=24;MQRankSum=0.243;QD=31.99;ReadPosRankSum=-3.611;VQSLOD=2.2304;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:33:96.27:0,96,1138	1/1:0,13:13:36.12:504,36,0	0/0:17,0:15:39:0,39,414	0/0:33,0:21:53.14:0,53,562	0/0:26,0:25:54.16:0,54,648	0/0:18,0:17:51.14:0,51,600	0/0:28,0:26:68.05:0,68,802	1/1:6,31:35:90.24:1178,90,0	0/0:34,0:32:90.26:0,90,1067	0/0:30,0:30:87.26:0,87,1035	0/0:23,0:23:63.19:0,63,754	0/0:28,0:26:69.18:0,69,804	0/0:34,0:33:93.17:0,93,1069	0/0:27,0:25:69.20:0,69,818	0/0:35,0:34:99:0,99,1178	0/0:36,0:35:99:0,99,1166	1/1:5,22:25:66.22:924,66,0	0/0:15,0:14:39.09:0,39,453	0/0:21,0:20:60.18:0,60,720	0/0:25,0:25:72.22:0,72,864	0/0:35,0:34:90.25:0,90,1067	0/0:16,0:15:33.03:0,33,377	0/0:20,0:20:54.16:0,54,638	0/0:28,0:27:75.22:0,75,889	0/0:18,0:18:45.12:0,45,526	0/0:36,0:35:99:0,99,1187	0/0:26,0:25:69.20:0,69,815	0/0:13,0:13:33.10:0,33,395
chr10	59557391	.	C	CTTT	4362.52	PASS	AB=1.000;AC=54;AF=0.964;AN=56;BaseQRankSum=2.090;DP=548;FS=10.247;HRun=10;HaplotypeScore=190.6911;InbreedingCoeff=0.0069;MQ=59.70;MQ0=1;MQRankSum=-3.546;QD=7.96;ReadPosRankSum=-2.637;VQSLOD=0.6156;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:31,1:32:47.57:427,48,0	1/1:5,0:12:14.21:51,14,0	0/1:29,0:22:10.26:10,0,130	0/1:26,0:18:30.42:30,0,110	1/1:17,0:15:20.19:185,20,0	1/1:10,0:9:14.47:123,14,0	1/1:11,14:22:10.34:77,10,0	1/1:17,0:38:32.62:164,33,0	1/1:17,0:16:11.44:108,11,0	1/1:21,1:20:32.72:280,33,0	1/1:19,0:18:15.77:101,16,0	1/1:16,0:15:15.45:156,15,0	1/1:15,0:11:18.71:110,19,0	1/1:9,0:8:13.21:72,13,0	1/1:19,0:19:40.10:288,40,0	1/1:13,0:12:24.95:175,25,0	1/1:5,0:29:37.60:154,38,0	1/1:10,0:9:12.40:150,12,0	1/1:19,1:19:27.22:231,27,0	1/1:17,0:17:17.89:193,18,0	1/1:12,0:9:1.49:16,1,0	1/1:16,0:15:14.31:125,14,0	1/1:15,0:14:14.10:138,14,0	1/1:13,0:13:5.97:23,6,0	1/1:16,0:14:24.94:148,25,0	1/1:36,1:34:64.12:519,64,0	1/1:21,0:21:23.95:188,24,0	1/1:15,0:14:19.95:119,20,0
chr10	59557401	.	TGG	T	4301.40	PASS	AB=0.847;AC=36;AF=0.643;AN=56;BaseQRankSum=7.303;DP=516;FS=3.524;HRun=2;HaplotypeScore=124.7355;InbreedingCoeff=0.0779;MQ=56.21;MQ0=1;MQRankSum=-9.201;QD=10.75;ReadPosRankSum=-0.728;VQSLOD=1.5758;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:25,5:30:99:294,0,407	0/0:13,0:12:35.99:0,36,389	0/0:40,0:21:15.81:0,16,353	0/1:35,0:20:2.38:2,0,311	0/1:10,4:13:99:169,0,181	0/1:10,0:9:62.40:62,0,134	0/1:20,0:19:99:114,0,164	0/0:32,0:32:47.82:0,48,1001	0/1:10,6:15:49.80:50,0,242	1/1:9,7:16:38.90:333,39,0	1/1:8,4:12:17.06:129,17,0	0/1:15,1:16:99:170,0,165	0/1:10,2:9:75.92:169,0,76	1/1:7,2:8:22.19:220,22,0	1/1:16,1:17:33.87:237,34,0	1/1:6,3:9:23.43:213,23,0	0/0:29,0:30:66.46:0,66,845	0/1:7,2:9:52.35:52,0,212	1/1:17,0:15:35.16:207,35,0	1/1:14,2:15:26.71:204,27,0	1/1:6,0:4:3.01:38,3,0	0/1:12,1:12:99:106,0,152	0/1:13,3:15:99:140,0,247	0/1:6,2:10:80.77:104,0,81	1/1:8,5:12:25.30:284,25,0	1/1:29,7:33:79.41:583,79,0	1/1:15,2:17:24.88:201,25,0	1/1:8,5:13:24.02:217,24,0
chr10	59557405	.	TC	T	1666.97	PASS	AB=0.983;AC=36;AF=0.643;AN=56;BaseQRankSum=9.103;DP=519;FS=5.409;HRun=1;HaplotypeScore=124.6844;InbreedingCoeff=0.0242;MQ=54.30;MQ0=1;MQRankSum=-8.612;QD=4.11;ReadPosRankSum=0.060;VQSLOD=0.2522;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:30,1:30:81.43:81,0,398	0/0:12,0:11:33.10:0,33,438	0/0:40,0:19:22.16:0,22,281	0/1:38,0:20:10.97:11,0,205	0/1:15,0:13:66.21:66,0,176	0/1:10,0:9:38.84:39,0,74	0/1:21,0:18:42.30:42,0,112	0/0:30,0:30:87.28:0,87,1178	0/1:18,0:16:8.88:9,0,231	1/1:17,1:16:33.04:199,33,0	1/1:13,0:12:11.69:63,12,0	0/1:20,0:19:43.89:44,0,241	0/1:16,0:12:51.39:51,0,137	1/1:11,0:10:18.27:111,18,0	1/1:17,0:16:10.77:111,11,0	1/1:9,2:9:14.97:99,15,0	0/0:31,0:31:89.71:0,90,1060	0/1:11,1:11:13.03:13,0,221	1/1:17,0:15:21.36:113,21,0	1/1:15,1:15:15.05:105,15,0	1/1:7,0:4:0.47:15,0,0	0/1:12,0:11:27.66:28,0,134	0/1:16,0:15:66.11:66,0,226	0/1:9,1:10:52.64:53,0,68	1/1:10,2:11:18.50:100,19,0	1/1:32,3:32:45.54:254,46,0	1/1:14,1:14:1.40:50,1,0	1/1:13,2:13:20.49:124,20,0
chr10	59557424	.	G	GTT	1928.27	PASS	AB=1.000;AC=28;AF=0.500;AN=56;BaseQRankSum=4.287;DP=489;FS=0.000;HRun=11;HaplotypeScore=122.5836;InbreedingCoeff=0.7027;MQ=56.53;MQ0=5;MQRankSum=-8.177;QD=7.14;ReadPosRankSum=-1.467;VQSLOD=0.8261;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:26:7.07:0,7,210	0/0:13,0:12:3.74:0,4,14	0/0:34,0:16:8.09:0,8,69	0/1:37,0:17:3.61:4,0,45	0/0:14,0:14:14.98:0,15,145	0/0:9,0:8:8.57:0,9,88	0/0:15,0:15:14.91:0,15,145	0/1:24,0:24:26.81:31,0,27	0/0:15,0:14:21.01:0,21,203	1/1:9,5:15:19.97:201,20,0	1/1:6,4:11:11.99:135,12,0	0/0:18,0:18:29.76:0,30,282	0/0:12,0:11:24.03:0,24,232	1/1:6,3:9:11.53:138,12,0	1/1:18,6:24:39.39:446,39,0	1/1:9,7:16:17.55:225,18,0	1/1:28,0:29:1.43:39,1,0	0/0:12,0:11:17.94:0,18,174	1/1:16,3:17:10.83:114,11,0	1/1:10,4:14:15.47:179,15,0	1/1:1,1:2:3.01:44,3,0	0/0:12,0:13:11.93:0,12,166	0/0:19,0:18:15.59:0,16,246	0/0:8,0:9:11.72:0,12,99	1/1:6,4:8:9.03:130,9,0	1/1:18,6:26:25.18:268,25,0	1/1:11,4:14:10.44:133,10,0	1/1:10,1:9:3.48:45,3,0
chr10	59557430	.	T	TA	1725.91	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=-4.121;DP=485;FS=42.529;HRun=0;HaplotypeScore=108.9494;InbreedingCoeff=0.7966;MQ=50.79;MQ0=7;MQRankSum=-0.405;QD=17.61;ReadPosRankSum=1.906;VQSLOD=1.9851;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:26:35.76:0,36,430	1/1:1,11:11:26.95:319,27,0	0/0:30,0:12:21.82:0,22,204	0/1:31,0:13:4.82:5,0,92	0/0:19,0:18:32.94:0,33,342	0/0:8,0:7:17.75:0,18,184	0/0:15,0:14:19.20:0,19,228	1/1:7,18:23:63.06:740,63,0	0/0:14,0:13:24.04:0,24,312	0/0:19,0:18:24.50:0,24,174	0/0:11,0:10:13.99:0,14,73	0/0:20,0:20:44.20:0,44,520	0/0:11,0:11:24.08:0,24,334	0/0:11,0:10:8.42:0,8,78	0/0:24,0:23:54.63:0,55,325	0/0:18,0:17:27.54:0,28,200	1/1:9,21:29:67.30:806,67,0	0/0:12,0:11:26.23:0,26,299	0/0:21,0:19:46.22:0,46,319	0/0:15,0:14:34.11:0,34,195	0/0:2,0:2:5.71:0,6,32	0/0:15,0:15:19.17:0,19,314	0/0:20,0:19:39.53:0,40,475	0/0:9,0:9:16.48:0,16,166	0/0:8,0:6:11.33:0,11,49	0/0:25,0:24:42.96:0,43,309	0/0:19,0:18:41.67:0,42,288	0/0:11,0:9:23.32:0,23,146
chr10	59557728	.	A	ATAT	30598.30	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-6.313;DP=589;FS=4.726;HRun=0;HaplotypeScore=69.9365;InbreedingCoeff=0.9953;MQ=76.44;MQ0=0;MQRankSum=-8.990;QD=54.84;ReadPosRankSum=4.970;VQSLOD=7.2613;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,25:25:60.16:1279,60,0	1/1:0,12:11:27.09:610,27,0	0/0:18,0:18:49.40:0,49,746	0/0:13,0:13:21.52:0,22,537	1/1:0,26:26:72.16:1378,72,0	1/1:3,35:39:93.32:2106,93,0	1/1:3,22:26:57.20:1287,57,0	1/1:7,29:37:93.31:2012,93,0	1/1:1,16:17:51.17:1125,51,0	1/1:1,21:23:69.20:1407,69,0	1/1:1,16:17:42.14:909,42,0	1/1:1,18:19:51.18:1152,51,0	1/1:3,16:19:42.14:951,42,0	1/1:1,22:24:60.21:1358,60,0	1/1:2,22:25:66.23:1494,66,0	1/1:1,25:26:66.23:1495,66,0	1/1:2,10:13:27.05:562,27,0	1/1:0,14:14:42.14:939,42,0	1/1:3,14:17:48.15:1016,48,0	1/1:1,9:11:27.09:609,27,0	1/1:4,23:27:51.18:1152,51,0	1/1:0,21:21:57.11:1194,57,0	1/1:1,17:19:33.11:746,33,0	1/1:0,11:11:24.08:543,24,0	1/1:1,13:14:39.13:882,39,0	1/1:0,30:30:87.30:1929,87,0	1/1:1,25:26:57.20:1287,57,0	1/1:1,18:20:54.16:1176,54,0
chr10	59558780	.	TA	T	9141.25	PASS	AB=1.000;AC=47;AF=0.839;AN=56;BaseQRankSum=6.404;DP=475;FS=16.771;HRun=10;HaplotypeScore=48.3838;InbreedingCoeff=0.8777;MQ=69.06;MQ0=0;MQRankSum=-1.169;QD=21.82;ReadPosRankSum=5.475;VQSLOD=3.7481;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,14:15:41.99:364,42,0	0/0:9,0:9:27.06:0,27,291	0/0:8,0:8:14.93:0,15,140	0/1:7,0:6:8.35:8,0,112	1/1:2,28:30:80.85:687,81,0	1/1:1,21:22:59.99:521,60,0	1/1:3,16:19:41.99:365,42,0	0/0:26,0:27:66.16:0,66,717	1/1:0,17:17:50.99:443,51,0	1/1:6,19:25:56.98:494,57,0	1/1:1,26:27:77.76:656,78,0	1/1:1,11:12:29.99:260,30,0	1/1:0,18:18:50.99:443,51,0	1/1:2,15:17:32.99:286,33,0	1/1:3,16:19:44.99:391,45,0	1/1:2,12:14:35.99:313,36,0	0/0:12,0:12:24.04:0,24,254	1/1:2,8:10:23.99:208,24,0	1/1:1,7:8:20.96:176,21,0	1/1:3,23:26:71.66:610,72,0	1/1:0,9:9:26.99:234,27,0	1/1:1,17:18:41.98:365,42,0	1/1:4,19:23:50.71:442,51,0	1/1:1,7:8:21:182,21,0	1/1:0,13:13:38.99:339,39,0	1/1:6,21:27:42.40:521,42,0	1/1:0,18:18:50.99:443,51,0	1/1:2,15:17:44.98:391,45,0
chr10	59559056	.	GC	G	12231.37	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=12.658;DP=498;FS=7.964;HRun=1;HaplotypeScore=49.4041;InbreedingCoeff=0.9968;MQ=85.46;MQ0=0;MQRankSum=-3.319;QD=39.84;ReadPosRankSum=4.791;VQSLOD=4.9316;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,12:12:36.12:503,36,0	0/0:7,0:7:21.07:0,21,336	0/0:17,0:17:43.38:0,43,627	0/0:15,0:15:42.13:0,42,650	1/1:0,31:31:93.31:1297,93,0	0/0:24,0:24:69.24:0,69,1101	0/0:14,0:14:42.14:0,42,671	0/0:31,0:31:93.30:0,93,1443	1/1:0,21:21:60.20:839,60,0	1/1:0,21:21:63.21:879,63,0	1/1:0,21:21:57.19:797,57,0	0/0:11,0:11:33.11:0,33,527	0/0:24,0:24:72.25:0,72,1138	1/1:0,17:17:45.15:625,45,0	1/1:0,17:17:48.16:671,48,0	1/1:0,23:23:63.21:881,63,0	0/0:15,0:15:45.15:0,45,714	1/1:0,17:17:51.17:712,51,0	1/1:0,8:8:24.07:317,24,0	1/1:0,28:28:81.27:1128,81,0	1/1:0,9:9:21.07:294,21,0	0/0:7,0:7:18.06:0,18,288	0/0:17,0:17:51.16:0,51,789	0/0:9,0:9:21.07:0,21,336	1/1:0,18:18:48.16:670,48,0	1/1:0,29:29:87.26:1197,87,0	1/1:0,24:24:69.23:965,69,0	1/1:0,11:11:33.11:458,33,0
chr10	59560450	.	AGGCTGGCCTCTAGCTCAC	A	27830.96	PASS	AB=0.529;AC=43;AF=0.796;AN=54;BaseQRankSum=9.986;DP=281;FS=6.560;HRun=0;HaplotypeScore=164.1164;InbreedingCoeff=0.8229;MQ=49.76;MQ0=0;MQRankSum=-10.321;QD=125.36;ReadPosRankSum=5.426;VQSLOD=4.1418;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,9:9:18.06:616,18,0	0/0:6,0:6:18.05:0,18,1189	0/0:9,0:9:27.08:0,27,1759	0/0:12,0:12:36.01:0,36,1892	1/1:0,21:21:54.66:2810,55,0	1/1:0,7:7:9.03:482,9,0	1/1:1,14:15:29.31:1452,29,0	0/0:14,0:14:42.14:0,42,2811	1/1:0,10:10:27.09:1443,27,0	1/1:0,13:13:39.08:1826,39,0	1/1:0,7:7:21.07:1124,21,0	1/1:0,8:8:24.08:1281,24,0	1/1:1,16:17:42.14:2242,42,0	1/1:0,2:2:3.01:161,3,0	1/1:0,9:9:24.08:1281,24,0	1/1:0,6:6:18.06:963,18,0	0/0:17,0:17:45.15:0,45,3911	1/1:1,4:5:15.02:664,15,0	1/1:0,9:9:26.92:1022,27,0	1/1:0,11:11:30.10:1606,30,0	./.	1/1:0,4:4:12.04:642,12,0	1/1:0,16:16:33.11:1765,33,0	0/1:1,8:9:21.25:469,0,21	1/1:0,7:7:21.07:1124,21,0	1/1:0,8:8:24.03:1028,24,0	1/1:1,17:18:45.63:2385,46,0	1/1:0,11:11:27.09:1445,27,0
chr10	59560507	.	AT	A	858.44	PASS	AB=0.909;AC=7;AF=0.125;AN=56;BaseQRankSum=-1.833;DP=351;FS=5.628;HRun=9;HaplotypeScore=142.6121;InbreedingCoeff=0.8016;MQ=62.67;MQ0=0;MQRankSum=3.112;QD=15.90;ReadPosRankSum=-0.176;VQSLOD=2.3812;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:41.99:0,42,430	1/1:2,4:6:12.01:110,12,0	0/0:18,0:15:27:0,27,279	0/0:14,1:11:24.07:0,24,277	0/0:20,0:20:33.10:0,33,377	0/0:9,0:9:24.07:0,24,277	0/0:13,0:13:30.07:0,30,335	1/1:1,17:17:48.03:439,48,0	0/0:12,0:12:30.03:0,30,319	0/0:11,0:11:30.09:0,30,346	0/0:8,0:8:18.05:0,18,205	0/0:13,0:13:24.04:0,24,263	0/0:19,0:19:36.07:0,36,398	0/0:4,0:4:11.99:0,12,122	0/0:13,0:13:30.05:0,30,329	0/0:7,0:8:17.89:0,18,187	1/1:2,17:19:50.06:445,50,0	0/0:9,0:9:27.08:0,27,312	0/1:9,1:10:6.41:6,0,185	0/0:15,0:15:36.11:0,36,415	0/0:3,0:3:9.03:0,9,104	0/0:7,0:7:12.04:0,12,138	0/0:11,0:11:18.01:0,18,189	0/0:10,0:10:12.04:0,12,138	0/0:13,0:13:30.09:0,30,346	0/0:12,0:12:30.05:0,30,330	0/0:24,0:24:57.11:0,57,623	0/0:14,0:14:30.07:0,30,332
chr10	59561444	.	A	ATT	696.06	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=7.762;DP=604;FS=1.439;HRun=2;HaplotypeScore=96.4636;InbreedingCoeff=0.9909;MQ=71.78;MQ0=12;MQRankSum=-6.380;QD=11.60;ReadPosRankSum=-3.417;VQSLOD=-0.5208;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:46:99:0,120,1725	1/1:4,2:9:14.71:133,15,0	0/0:17,0:15:32.59:0,33,357	0/0:17,0:15:38.55:0,39,424	0/0:20,0:20:45.15:0,45,657	0/0:20,0:19:54.14:0,54,769	0/0:27,0:27:78.21:0,78,1084	1/1:22,5:31:18.66:355,19,0	0/0:15,0:15:42.12:0,42,597	0/0:37,0:35:99:0,102,1456	0/0:19,0:19:48.15:0,48,684	0/0:16,0:15:42.01:0,42,557	0/0:20,0:20:51.17:0,51,739	0/0:16,0:15:42.14:0,42,610	0/0:20,0:20:42.14:0,42,603	0/0:17,0:16:36.09:0,36,507	1/1:8,9:17:35.92:348,36,0	0/0:28,0:28:50.13:0,50,775	0/0:15,0:14:36.12:0,36,526	0/0:21,0:21:48.15:0,48,680	0/0:22,0:22:57.19:0,57,837	0/0:17,0:17:42.13:0,42,598	0/0:15,0:15:36.10:0,36,508	0/0:22,0:22:60.20:0,60,861	0/0:22,0:22:54.17:0,54,768	0/0:36,0:33:93.28:0,93,1307	0/0:22,0:22:60.15:0,60,829	0/0:15,0:16:44.74:0,45,627
chr10	59562554	.	T	TGG	1745.32	PASS	AB=0.974;AC=18;AF=0.321;AN=56;BaseQRankSum=3.436;DP=540;FS=1.636;HRun=3;HaplotypeScore=137.7911;InbreedingCoeff=0.4961;MQ=54.15;MQ0=7;MQRankSum=-1.034;QD=7.69;ReadPosRankSum=1.386;VQSLOD=0.4693;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:0.61:0,1,80	0/0:10,0:10:11.66:0,12,91	0/0:22,0:10:23.94:0,24,227	0/0:18,0:8:0.51:0,1,26	0/0:27,0:27:13.95:0,14,272	1/1:21,4:25:41.95:414,42,0	1/1:18,3:21:3.44:165,3,0	0/0:23,0:20:45.81:0,46,370	0/1:23,0:23:0.93:1,0,34	0/0:29,0:25:38.36:0,38,348	0/1:23,0:23:4.12:4,0,85	1/1:20,2:22:9.89:319,10,0	0/1:18,3:22:4.59:256,0,5	0/0:16,0:16:2.86:0,3,23	0/1:8,0:8:0:0,0,0	0/0:14,0:14:3:0,3,25	0/0:19,0:18:31.71:0,32,216	0/0:11,0:10:27.36:0,27,187	0/0:14,0:11:10.09:0,10,159	0/0:19,0:19:14.98:0,15,124	0/1:11,0:11:3.62:4,0,64	1/1:17,2:19:31.28:346,31,0	1/1:19,0:19:25.97:204,26,0	1/1:21,0:21:19.86:193,20,0	0/0:22,0:22:23.22:0,23,285	0/0:23,0:22:56.22:0,56,396	0/0:15,0:14:13.74:0,14,84	0/1:13,0:13:10.27:10,0,65
chr10	59562580	.	T	TGTGTGTGTGC	6975.25	PASS	AB=1.000;AC=37;AF=0.661;AN=56;BaseQRankSum=-0.050;DP=473;FS=5.403;HRun=0;HaplotypeScore=191.8803;InbreedingCoeff=0.0093;MQ=47.53;MQ0=5;MQRankSum=-1.017;QD=16.69;ReadPosRankSum=-0.147;VQSLOD=3.6963;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:30:5.44:80,5,0	1/1:9,0:9:8.75:137,9,0	0/0:13,0:6:18:0,18,169	0/0:18,0:10:8.90:0,9,139	0/1:17,0:17:32.83:65,0,33	1/1:13,3:19:20.99:625,21,0	1/1:23,2:26:27.30:455,27,0	1/1:22,0:19:50.40:548,50,0	0/1:20,0:20:49.35:55,0,49	0/1:23,0:20:12.23:810,0,12	0/0:15,0:15:3.22:0,3,12	1/1:23,2:25:25.51:546,26,0	1/1:22,2:25:35.88:807,36,0	0/1:15,0:15:13.03:103,0,13	0/0:9,0:9:2.65:0,3,23	0/1:16,0:16:9.82:241,0,10	1/1:18,0:17:20.53:364,21,0	1/1:8,0:7:14.19:286,14,0	0/1:9,0:8:45.80:46,0,83	0/1:16,0:16:16.21:90,0,16	0/1:11,0:11:52.64:182,0,53	1/1:12,1:15:11.47:184,11,0	1/1:12,0:12:3.01:92,3,0	1/1:22,0:24:9.12:206,9,0	1/1:15,0:15:14.89:267,15,0	0/1:14,0:13:73.04:294,0,73	0/1:15,0:14:6.95:162,0,7	0/1:13,0:13:19.05:331,0,19
chr10	59562636	.	GGCCGGCCGGCCTGCCTGCCT	G	10650	PASS	AB=1.000;AC=33;AF=0.589;AN=56;BaseQRankSum=2.326;DP=402;FS=20.857;HRun=0;HaplotypeScore=206.2398;InbreedingCoeff=0.2029;MQ=63.72;MQ0=3;MQRankSum=-4.057;QD=35.03;ReadPosRankSum=7.109;VQSLOD=2.2073;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:13:5.44:758,5,0	0/1:5,0:5:29.85:30,0,47	0/0:11,0:9:5.21:0,5,97	0/0:10,0:8:6.73:0,7,88	0/1:18,0:18:64.93:597,0,65	1/1:4,0:19:21.07:985,21,0	1/1:22,0:21:15.05:658,15,0	0/1:21,0:21:11.19:11,0,372	0/1:24,0:24:99:947,0,220	0/1:18,0:17:51.34:754,0,51	0/1:12,0:12:62.78:403,0,63	1/1:1,14:16:15.05:782,15,0	1/1:2,0:17:9.03:429,9,0	0/0:16,0:16:8.87:0,9,228	0/0:20,0:20:3.86:0,4,61	0/0:18,0:18:14.97:0,15,327	0/1:28,0:28:99:150,0,850	0/1:2,0:2:0:0,0,0	1/1:8,0:8:11.50:367,11,0	0/0:11,0:11:2.59:0,3,25	1/1:5,0:5:12.04:306,12,0	1/1:1,11:12:9.03:394,9,0	1/1:3,6:8:3.01:150,3,0	1/1:5,11:16:6.49:338,6,0	1/1:15,0:14:36.12:1084,36,0	0/1:16,0:16:12.40:859,0,12	0/0:12,0:12:6.01:0,6,69	1/1:8,0:8:21.07:648,21,0
chr10	59562640	.	GGCCGGCCT	G	8451.77	PASS	AB=1.000;AC=48;AF=0.857;AN=56;BaseQRankSum=-0.008;DP=374;FS=2.714;HRun=0;HaplotypeScore=142.8247;InbreedingCoeff=0.1949;MQ=55.29;MQ0=7;MQRankSum=-1.553;QD=24.36;ReadPosRankSum=5.110;VQSLOD=4.2351;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:13:32.82:444,33,0	1/1:5,0:5:14.96:171,15,0	0/0:9,0:6:5.98:0,6,49	0/1:8,0:6:10.04:10,0,24	1/1:16,0:16:16.44:496,16,0	1/1:15,0:15:21.07:397,21,0	1/1:16,0:15:15.05:269,15,0	1/1:0,0:20:46.43:467,46,0	0/1:24,0:24:12.78:663,0,13	1/1:17,0:16:35.94:498,36,0	1/1:9,2:11:27.05:480,27,0	0/1:16,0:16:1.94:264,0,2	1/1:15,0:15:9.03:170,9,0	0/0:18,0:17:0.77:0,1,84	1/1:2,18:20:12.04:330,12,0	0/1:19,0:19:24.44:24,0,30	1/1:27,0:27:55.92:1175,56,0	1/1:2,0:2:2.97:20,3,0	1/1:8,0:6:17.99:229,18,0	1/1:0,11:11:3.48:53,3,0	1/1:5,0:5:12.04:164,12,0	1/1:11,0:11:6.02:112,6,0	1/1:7,0:6:3.01:56,3,0	1/1:11,0:11:6.02:112,6,0	1/1:13,0:12:36.12:647,36,0	1/1:2,14:16:35.96:649,36,0	1/1:1,11:12:6.02:164,6,0	1/1:8,0:8:21.07:386,21,0
chr10	59562690	.	C	CCTTCCTTT	1995.88	PASS	AB=1.000;AC=25;AF=0.446;AN=56;BaseQRankSum=5.019;DP=493;FS=11.314;HRun=0;HaplotypeScore=181.1043;InbreedingCoeff=-0.1501;MQ=40.68;MQ0=25;MQRankSum=-4.730;QD=5.58;ReadPosRankSum=8.889;VQSLOD=-0.0722;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:21,0:21:43.28:392,0,43	1/1:2,0:2:2.94:18,3,0	1/1:6,0:2:2.04:6,2,0	0/0:3,0:2:5.97:0,6,49	1/1:27,0:24:37.92:653,38,0	0/1:22,0:22:14.37:14,0,178	0/1:16,0:15:37.47:37,0,120	0/0:24,0:19:24.13:0,24,177	1/1:14,14:29:29.62:203,30,0	0/1:15,0:12:16.61:17,0,175	0/1:13,0:12:5.93:6,0,137	0/1:27,0:25:99:106,0,126	0/1:30,0:30:53.32:53,0,149	0/1:18,0:18:85.47:85,0,103	0/1:19,0:19:29.13:29,0,133	0/0:17,0:17:17.71:0,18,210	0/0:30,0:30:34.68:0,35,304	1/1:7,0:6:15.01:184,15,0	0/0:15,0:10:23.88:0,24,185	0/0:17,0:16:30.38:0,30,265	0/0:12,0:10:15.54:0,16,120	0/1:14,0:13:28.78:29,0,80	0/1:18,0:17:93.83:94,0,140	0/1:22,0:22:73.40:73,0,154	0/1:17,0:16:30.77:31,0,147	0/1:24,0:22:99:115,0,128	0/0:17,0:17:9.28:0,9,170	0/1:10,0:10:23.70:24,0,42
chr10	59562713	.	TC	T	641.45	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=2.925;DP=516;FS=10.576;HRun=2;HaplotypeScore=116.7172;InbreedingCoeff=0.6962;MQ=62.66;MQ0=9;MQRankSum=2.708;QD=14.25;ReadPosRankSum=-0.542;VQSLOD=2.0534;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:78.94:0,79,984	1/1:3,0:3:6.02:73,6,0	0/0:16,0:9:21.06:0,21,251	0/0:12,0:11:7.10:0,7,319	0/0:23,0:23:61.11:0,61,861	0/0:20,0:20:45.87:0,46,610	0/0:24,0:24:69.01:0,69,900	1/1:3,16:19:47.50:596,47,0	0/0:26,0:26:29.93:0,30,334	0/0:21,0:18:47.66:0,48,637	0/0:15,0:15:42.14:0,42,601	0/0:25,0:25:62.32:0,62,823	0/0:30,0:30:64.97:0,65,892	0/0:19,0:19:53.97:0,54,757	0/0:14,0:14:38.32:0,38,488	0/0:18,0:18:48.16:0,48,666	0/1:23,0:23:40.75:93,0,41	0/0:11,0:10:26.56:0,27,333	0/0:14,0:14:42.01:0,42,513	0/0:14,0:14:42.13:0,42,583	0/0:12,0:12:33.11:0,33,472	0/0:16,0:15:44:0,44,564	0/0:21,0:21:54.28:0,54,710	0/0:26,0:26:72.24:0,72,1025	0/0:14,0:14:42.14:0,42,608	0/0:28,0:27:69.37:0,69,877	0/0:14,0:14:33.10:0,33,449	0/0:9,0:9:27.09:0,27,393
chr10	59562715	.	C	CTTG	1291.06	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=-0.300;DP=523;FS=9.435;HRun=0;HaplotypeScore=140.8496;InbreedingCoeff=0.7875;MQ=65.59;MQ0=8;MQRankSum=1.663;QD=22.26;ReadPosRankSum=-1.872;VQSLOD=2.9829;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:72.14:0,72,1136	1/1:0,3:3:6.02:122,6,0	0/0:19,0:12:24.07:0,24,350	0/1:12,0:11:13.53:14,0,396	0/0:24,0:24:60.66:0,61,954	0/0:20,0:20:42.96:0,43,682	0/0:24,0:24:63.02:0,63,1004	1/1:20,0:20:51.17:1046,51,0	0/0:25,0:25:14.44:0,14,374	0/0:20,0:18:42.01:0,42,733	0/0:15,0:15:42.14:0,42,702	0/0:24,0:24:57.97:0,58,912	0/0:29,0:29:65.70:0,66,1003	0/0:21,0:21:57.04:0,57,848	0/0:15,0:15:42.12:0,42,583	0/0:18,0:18:48.16:0,48,807	1/1:5,18:23:12.04:247,12,0	0/0:11,0:10:27.09:0,27,438	0/0:14,0:14:42.10:0,42,656	0/0:15,0:15:45.09:0,45,707	0/0:12,0:12:33.11:0,33,544	0/0:16,0:15:41.34:0,41,624	0/0:20,0:20:48.24:0,48,762	0/0:27,0:27:75.24:0,75,1195	0/0:16,0:16:45.11:0,45,692	0/0:28,0:27:57.50:0,58,926	0/0:14,0:14:33.11:0,33,538	0/0:9,0:9:27.09:0,27,431
chr10	59564110	.	C	CAA	18140.68	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=-14.461;DP=633;FS=10.633;HRun=4;HaplotypeScore=69.2680;InbreedingCoeff=0.9971;MQ=78.49;MQ0=2;MQRankSum=-1.768;QD=47.36;ReadPosRankSum=5.115;VQSLOD=3.1982;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,13:14:33.11:594,33,0	0/0:7,0:7:15.05:0,15,200	0/0:20,0:20:29.57:0,30,520	0/0:9,0:9:21.03:0,21,262	1/1:2,22:24:66.11:1118,66,0	0/0:26,0:26:75.22:0,75,969	0/0:15,0:15:42.11:0,42,528	0/0:34,0:34:99:0,102,1331	1/1:1,21:22:63.22:1125,63,0	1/1:3,23:27:72.23:1267,72,0	1/1:1,27:28:81.09:1321,81,0	0/0:25,0:25:69.21:0,69,903	0/0:27,0:27:72.18:0,72,913	1/1:0,21:21:51.17:918,51,0	1/1:0,24:25:66.23:1189,66,0	1/1:3,27:32:72.25:1294,72,0	0/0:20,0:20:57.19:0,57,759	1/1:1,15:16:42.14:756,42,0	1/1:2,17:19:54.18:937,54,0	1/1:0,25:24:72.17:1230,72,0	1/1:0,16:16:45.15:810,45,0	0/0:34,0:34:93.29:0,93,1224	0/0:16,0:16:45.12:0,45,582	0/0:17,0:17:48.11:0,48,606	1/1:2,28:29:78.27:1405,78,0	1/1:1,29:30:84.27:1484,84,0	1/1:2,40:42:99:2045,114,0	1/1:0,12:12:36.12:648,36,0
chr10	59564426	.	AT	A	830.54	PASS	AB=0.769;AC=7;AF=0.125;AN=56;BaseQRankSum=7.807;DP=509;FS=6.713;HRun=10;HaplotypeScore=48.8579;InbreedingCoeff=0.7747;MQ=73.04;MQ0=1;MQRankSum=1.122;QD=14.57;ReadPosRankSum=-3.029;VQSLOD=2.6163;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:6:12.03:0,12,133	1/1:1,6:7:17.99:156,18,0	0/0:14,0:14:23.93:0,24,248	0/1:7,2:9:23.45:23,0,108	0/0:24,1:25:43.08:0,43,682	0/0:22,0:22:60.16:0,60,664	0/0:12,0:12:27.07:0,27,299	1/1:4,26:30:77.93:666,78,0	0/0:18,0:18:48.11:0,48,522	0/0:24,0:24:63.17:0,63,694	0/0:17,0:17:48.06:0,48,514	0/0:18,0:18:54.15:0,54,597	0/0:18,1:19:19.07:0,19,438	0/0:17,0:17:48.10:0,48,512	0/0:27,2:29:26.15:0,26,737	0/0:20,0:20:54.14:0,54,590	1/1:2,8:10:14.99:130,15,0	0/0:22,0:22:54.15:0,54,596	0/0:23,0:23:63.16:0,63,684	0/0:19,0:19:57.15:0,57,630	0/0:9,1:10:4.02:0,4,273	0/0:16,0:16:42.11:0,42,465	0/0:15,1:16:16.06:0,16,405	0/0:9,0:9:27.07:0,27,299	0/0:23,0:23:69.19:0,69,763	0/0:20,1:21:22.07:0,22,472	0/0:32,0:32:84.23:0,84,926	0/0:20,0:20:32.90:0,33,525
chr10	59565685	.	TTTTTG	T	6582.58	PASS	AB=1.000;AC=25;AF=0.446;AN=56;BaseQRankSum=9.188;DP=598;FS=8.239;HRun=0;HaplotypeScore=115.5316;InbreedingCoeff=0.8720;MQ=61.98;MQ0=4;MQRankSum=0.997;QD=22.24;ReadPosRankSum=3.098;VQSLOD=4.2397;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:78.27:0,78,2128	0/0:5,0:5:5.78:0,6,53	0/0:9,0:7:3:0,3,26	0/0:17,0:9:5.80:0,6,72	0/0:30,0:30:78.23:0,78,1813	0/0:15,0:15:30.08:0,30,665	0/0:20,0:20:32.79:0,33,923	0/1:36,0:33:9.01:9,0,242	0/0:18,0:18:39.10:0,39,885	1/1:11,11:22:36.12:659,36,0	1/1:3,16:17:38.99:591,39,0	0/0:21,0:21:33.11:0,33,792	0/0:21,0:21:57.17:0,57,1385	1/1:4,14:18:15.05:275,15,0	1/1:8,13:21:30.08:517,30,0	1/1:4,8:12:15.05:275,15,0	0/0:31,0:31:63.87:0,64,812	0/0:17,0:17:39.10:0,39,972	1/1:21,7:26:21.04:324,21,0	1/1:2,18:19:48.03:774,48,0	1/1:9,17:26:14.65:275,15,0	0/0:18,0:17:51.18:0,51,1369	0/0:9,0:9:24.08:0,24,622	0/0:33,0:32:61.27:0,61,1871	1/1:5,19:24:42.14:770,42,0	1/1:7,19:26:57.18:1015,57,0	1/1:6,24:30:45.15:824,45,0	1/1:5,9:13:15.05:275,15,0
chr10	59565700	.	G	GT	1725.46	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=4.623;DP=577;FS=0.000;HRun=4;HaplotypeScore=87.2595;InbreedingCoeff=0.8655;MQ=59.16;MQ0=9;MQRankSum=-2.633;QD=23.01;ReadPosRankSum=-2.355;VQSLOD=2.0805;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:84.24:0,84,953	1/1:3,2:5:6.02:77,6,0	0/0:5,0:2:0.14:0,0,1	0/0:22,0:11:4.66:0,5,153	0/0:33,0:32:93.26:0,93,1053	0/0:13,0:13:39.11:0,39,442	0/0:20,0:19:48.75:0,49,605	1/1:12,25:36:31.87:794,32,0	0/0:17,0:17:45.13:0,45,510	0/0:17,0:17:44.37:0,44,270	0/0:19,0:17:45.16:0,45,329	0/0:15,0:15:42.12:0,42,476	0/0:24,0:24:69.20:0,69,782	0/0:16,0:16:16.40:0,16,91	0/0:17,0:17:33.20:0,33,203	0/0:11,0:11:22.42:0,22,159	1/1:1,30:31:78.25:988,78,0	0/0:17,0:17:45.13:0,45,510	0/0:22,0:17:34.45:0,34,293	0/0:21,0:20:44.91:0,45,343	0/0:24,0:24:31.05:0,31,225	0/0:18,0:17:51.15:0,51,578	0/0:11,0:11:33.09:0,33,374	0/0:33,0:32:90.25:0,90,1014	0/0:23,0:23:43.51:0,44,227	0/0:22,0:22:60.38:0,60,340	0/0:27,0:27:49.27:0,49,272	0/0:20,0:17:25.42:0,25,190
chr10	59569020	.	T	TGAG	3428.95	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-9.903;DP=594;FS=0.534;HRun=0;HaplotypeScore=80.0118;InbreedingCoeff=0.9831;MQ=79.95;MQ0=0;MQRankSum=-4.569;QD=56.21;ReadPosRankSum=-1.078;VQSLOD=5.3878;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:96.33:0,96,1627	1/1:1,6:7:12.04:276,12,0	0/0:21,0:21:36.46:0,36,783	0/0:15,0:15:36.12:0,36,595	0/0:31,0:31:87.28:0,87,1439	0/0:20,0:20:60.18:0,60,971	0/0:18,0:18:51.16:0,51,840	1/1:6,25:32:90.30:1977,90,0	0/0:21,0:21:60.21:0,60,1015	0/0:26,0:26:78.26:0,78,1306	0/0:30,0:30:87.30:0,87,1475	0/0:21,0:21:63.19:0,63,1017	0/0:28,0:28:81.26:0,81,1355	0/0:32,0:32:90.29:0,90,1509	0/0:23,0:23:66.23:0,66,1118	0/0:26,0:26:78.27:0,78,1325	1/1:0,21:22:51.18:1176,51,0	0/0:16,0:16:48.11:0,48,744	0/0:18,0:18:54.17:0,54,893	0/0:18,0:18:54.17:0,54,892	0/0:14,0:14:42.14:0,42,713	0/0:12,0:12:36.12:0,36,610	0/0:20,0:20:60.21:0,60,1012	0/0:21,0:21:60.21:0,60,1023	0/0:12,0:12:36.12:0,36,610	0/0:15,0:15:42.14:0,42,713	0/0:38,0:38:99:0,111,1882	0/0:5,0:5:15.05:0,15,256
chr10	59570285	.	AC	A	1639.13	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=7.458;DP=617;FS=3.437;HRun=3;HaplotypeScore=67.3382;InbreedingCoeff=0.9984;MQ=92.13;MQ0=0;MQRankSum=-1.260;QD=32.14;ReadPosRankSum=-3.166;VQSLOD=2.4732;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:66.21:0,66,930	1/1:0,8:8:21.07:260,21,0	0/0:29,0:28:73.92:0,74,984	0/0:30,0:30:68.03:0,68,884	0/0:29,0:29:87.28:0,87,1234	0/0:25,0:25:75.23:0,75,1044	0/0:13,0:13:36.12:0,36,517	1/1:1,29:30:87.27:1078,87,0	0/0:19,0:19:54.18:0,54,775	0/0:31,0:31:90.30:0,90,1295	0/0:20,0:20:60.18:0,60,845	0/0:23,0:23:63.21:0,63,906	0/0:28,0:28:84.28:0,84,1209	0/0:28,0:28:84.28:0,84,1208	0/0:29,0:29:84.28:0,84,1205	0/0:23,0:23:66.22:0,66,948	1/1:1,12:13:36.11:443,36,0	0/0:15,0:15:42.14:0,42,603	0/0:20,0:20:60.20:0,60,864	0/0:23,0:23:69.22:0,69,975	0/0:17,0:17:42.14:0,42,604	0/0:14,0:14:42.14:0,42,604	0/0:20,0:20:54.18:0,54,777	0/0:17,0:17:48.12:0,48,667	0/0:23,0:23:69.23:0,69,993	0/0:26,0:26:75.24:0,75,1063	0/0:29,0:29:84.24:0,84,1153	0/0:13,0:13:39.13:0,39,562
chr10	59570991	.	C	CT	3586.73	PASS	AB=0.686;AC=39;AF=0.696;AN=56;BaseQRankSum=-4.162;DP=566;FS=9.170;HRun=15;HaplotypeScore=88.2938;InbreedingCoeff=0.1675;MQ=75.20;MQ0=2;MQRankSum=-0.100;QD=7.43;ReadPosRankSum=-1.018;VQSLOD=1.9374;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:6,8:16:12.28:108,0,12	0/0:2,0:8:9.95:0,10,29	0/0:32,0:19:6.47:0,6,28	0/1:18,0:13:15.81:16,0,30	1/1:12,14:29:20.48:252,20,0	1/1:5,0:15:20:102,20,0	1/1:5,2:16:23.14:142,23,0	0/0:9,0:28:38.77:0,39,119	1/1:8,13:22:6.53:135,7,0	1/1:13,17:31:17.26:345,17,0	1/1:10,15:26:24.54:277,25,0	1/1:7,3:23:28.75:158,29,0	0/1:7,2:22:0.19:63,0,0	1/1:4,10:15:23.66:179,24,0	1/1:12,11:24:2.08:144,2,0	1/1:4,13:18:32.86:267,33,0	0/0:4,0:13:16.25:0,16,47	0/1:3,12:17:19.05:92,0,19	0/1:7,4:11:35.77:36,0,39	1/1:11,17:29:2.95:257,3,0	0/1:10,6:17:18.20:72,0,18	1/1:3,1:14:13.35:68,13,0	1/1:4,2:24:14.17:147,14,0	1/1:2,1:10:11.99:68,12,0	0/1:9,7:18:39.40:122,0,39	0/1:12,16:28:8.31:247,0,8	1/1:17,9:26:1.28:240,1,0	0/1:5,6:13:10.03:51,0,10
chr10	59571358	.	A	ATATC	1257.39	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-8.816;DP=640;FS=3.911;HRun=0;HaplotypeScore=190.2405;InbreedingCoeff=0.8526;MQ=59.89;MQ0=0;MQRankSum=4.165;QD=17.71;ReadPosRankSum=-6.906;VQSLOD=1.4764;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:23.83:0,24,204	1/1:1,12:13:8.90:214,9,0	0/0:18,0:18:24.21:0,24,267	0/0:20,0:13:14.10:0,14,151	0/0:36,0:36:44.14:0,44,328	0/0:14,0:14:23.97:0,24,219	0/0:8,0:8:12.01:0,12,116	1/1:48,0:48:96.08:883,96,0	0/0:30,0:30:50.10:0,50,501	0/0:39,0:39:94.75:0,95,921	0/0:23,0:23:14.85:0,15,113	0/0:18,0:18:35.91:0,36,324	0/0:27,0:27:41.07:0,41,334	0/0:16,0:16:34.21:0,34,341	0/0:29,0:29:60.02:0,60,597	0/0:27,0:27:56.97:0,57,577	1/1:3,7:10:12.04:293,12,0	0/0:13,0:13:23.74:0,24,178	0/0:10,0:10:9.86:0,10,82	0/0:37,0:37:53.82:0,54,454	0/0:12,0:12:9.43:0,9,71	0/0:28,0:28:47.79:0,48,412	0/0:28,0:28:32.37:0,32,314	0/0:10,0:10:2.97:0,3,20	0/0:24,0:24:32.91:0,33,309	0/0:31,0:31:75.38:0,75,699	0/0:32,0:32:59.69:0,60,574	0/0:16,0:16:39.01:0,39,365
chr10	59571369	.	TCTAACTAACTAA	T	12932.84	PASS	AB=0.643;AC=41;AF=0.732;AN=56;BaseQRankSum=3.889;DP=623;FS=0.644;HRun=0;HaplotypeScore=215.8996;InbreedingCoeff=0.6887;MQ=55.07;MQ0=1;MQRankSum=-6.680;QD=26.07;ReadPosRankSum=8.031;VQSLOD=2.7999;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,13:23:4.31:205,4,0	0/0:12,0:12:13.60:0,14,500	0/0:17,0:14:6.02:0,6,184	0/0:18,0:9:3.01:0,3,53	1/1:11,23:34:12.19:324,12,0	1/1:5,9:14:9.03:303,9,0	0/1:4,5:9:0.92:99,0,1	0/0:44,0:44:72.23:0,72,2454	1/1:9,22:31:27.09:936,27,0	1/1:17,18:35:54.19:1851,54,0	1/1:9,13:22:3.01:92,3,0	1/1:9,10:19:15.05:512,15,0	1/1:12,11:23:12.04:417,12,0	1/1:5,13:18:24.08:830,24,0	1/1:11,19:30:30.10:1036,30,0	1/1:8,19:27:39.13:1324,39,0	0/0:12,0:12:19.31:0,19,836	1/1:7,5:12:3.01:104,3,0	1/1:1,6:7:18.03:435,18,0	1/1:16,21:37:9.03:306,9,0	0/0:6,9:15:0.47:0,0,1	1/1:12,16:28:15.01:426,15,0	1/1:8,23:31:12.47:505,12,0	0/0:5,4:9:4.48:0,4,12	1/1:9,12:21:12.04:417,12,0	1/1:14,15:29:45.15:1455,45,0	1/1:11,19:30:30.10:1042,30,0	1/1:11,5:16:9.03:312,9,0
chr10	59574029	.	G	GCT	92.69	PASS	AB=0.989;AC=12;AF=0.250;AN=48;BaseQRankSum=-0.743;DP=278;FS=1.636;HRun=0;HaplotypeScore=43.3057;InbreedingCoeff=0.4906;MQ=58.05;MQ0=32;MQRankSum=0.225;QD=0.97;ReadPosRankSum=0.730;VQSLOD=1.4585;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:13:11.71:0,12,125	0/0:5,0:5:11.86:0,12,78	0/0:35,0:11:23.55:0,24,231	0/1:45,0:8:22.26:22,0,32	0/0:3,0:3:3.01:0,3,39	1/1:15,0:13:6.01:66,6,0	1/1:9,0:9:6.13:67,6,0	0/0:5,0:5:8.86:0,9,56	0/0:7,0:7:5.23:0,5,48	0/0:6,0:4:6.01:0,6,63	0/0:5,0:5:2.88:0,3,16	./.	1/1:3,0:3:2.97:20,3,0	0/0:7,0:6:14.98:0,15,184	0/0:7,0:6:6:0,6,67	0/0:9,0:8:11.98:0,12,131	0/0:11,0:11:20.90:0,21,194	0/0:15,0:15:41.36:0,41,450	0/0:6,0:6:18:0,18,221	0/0:2,0:1:2.94:0,3,18	./.	1/1:4,0:4:2.85:19,3,0	0/1:7,0:7:0:0,0,0	1/1:12,0:9:5.80:32,6,0	./.	0/0:5,0:5:5.87:0,6,36	0/0:9,0:9:17.75:0,18,204	./.
chr10	59574030	.	C	CT	176.09	PASS	AB=1.000;AC=13;AF=0.260;AN=50;BaseQRankSum=-2.054;DP=282;FS=8.460;HRun=0;HaplotypeScore=41.0399;InbreedingCoeff=0.5018;MQ=57.69;MQ0=32;MQRankSum=1.232;QD=1.73;ReadPosRankSum=0.006;VQSLOD=0.3349;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:12:11.93:0,12,120	0/0:5,0:5:11.86:0,12,79	0/0:38,0:12:11.94:0,12,212	0/1:47,0:8:9.38:9,0,50	0/0:3,0:3:3.01:0,3,32	1/1:3,12:13:6.01:76,6,0	1/1:2,7:9:9.91:112,10,0	0/0:6,0:6:8.90:0,9,63	0/0:7,0:7:5.85:0,6,40	0/0:6,0:4:5.92:0,6,43	0/0:5,0:5:2.92:0,3,17	./.	1/1:3,0:3:2.97:20,3,0	0/0:7,0:6:13.38:0,13,141	0/0:7,0:6:6:0,6,57	0/0:9,0:8:11.78:0,12,95	0/0:12,0:12:20.89:0,21,180	0/0:17,0:15:40.28:0,40,365	0/0:6,0:6:18:0,18,200	0/0:2,0:1:2.94:0,3,18	./.	1/1:4,0:4:2.33:18,2,0	0/1:7,0:7:0:0,0,0	1/1:4,8:9:6.01:74,6,0	0/1:5,0:4:0:0,0,0	0/0:5,0:5:5.87:0,6,36	0/0:10,0:9:17.67:0,18,161	./.
chr10	59574272	.	G	GCA	6505.93	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-14.885;DP=657;FS=0.763;HRun=0;HaplotypeScore=77.5323;InbreedingCoeff=0.9968;MQ=72.56;MQ0=1;MQRankSum=-0.232;QD=36.35;ReadPosRankSum=3.152;VQSLOD=6.7838;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:44.81:0,45,529	0/0:7,0:7:18.04:0,18,218	0/0:24,0:24:56.30:0,56,649	0/0:20,0:20:39.08:0,39,473	0/0:22,0:22:57.19:0,57,733	1/1:2,31:33:81.28:1367,81,0	1/1:8,20:28:60.21:1012,60,0	0/0:43,0:43:96.30:0,96,1223	0/0:25,0:25:66.20:0,66,835	0/0:28,0:28:78.24:0,78,992	0/0:23,0:23:57.17:0,57,719	1/1:7,27:34:62.47:1375,62,0	1/1:2,30:31:56.99:931,57,0	0/0:17,0:17:48.16:0,48,617	0/0:25,0:25:66.21:0,66,849	0/0:21,0:21:60.19:0,60,772	0/0:21,0:21:54.18:0,54,693	0/0:15,0:15:27.26:0,27,432	0/0:14,0:14:36.12:0,36,463	0/0:27,0:27:75.20:0,75,923	0/0:32,0:32:84.24:0,84,1064	1/1:3,10:13:21.07:354,21,0	1/1:1,24:25:47.82:809,48,0	1/1:1,13:14:39.13:658,39,0	0/0:19,0:19:48.16:0,48,618	0/0:21,0:21:60.19:0,60,772	0/0:48,0:48:99:0,129,1629	0/0:7,0:7:21.07:0,21,270
chr10	59574854	.	G	GT	5529.31	PASS	AB=0.786;AC=40;AF=0.714;AN=56;BaseQRankSum=-2.385;DP=582;FS=0.000;HRun=13;HaplotypeScore=79.3457;InbreedingCoeff=0.3184;MQ=71.05;MQ0=0;MQRankSum=0.050;QD=10.82;ReadPosRankSum=1.218;VQSLOD=4.5355;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:23,20:47:61.28:751,61,0	1/1:4,0:5:2.84:14,3,0	0/1:21,0:17:42.41:42,0,60	0/0:14,0:11:15.23:0,15,92	1/1:4,18:23:53.03:452,53,0	0/1:17,3:21:12.05:12,0,209	0/0:13,0:15:25.78:0,26,170	1/1:15,1:31:42.42:234,42,0	1/1:9,9:19:27.24:362,27,0	1/1:7,12:21:15.38:252,15,0	1/1:1,23:24:32.99:369,33,0	0/1:22,3:26:0.61:1,0,203	0/1:13,3:16:28.86:29,0,184	1/1:3,18:21:18.46:314,18,0	0/1:3,12:16:5.28:221,0,5	0/1:4,13:19:8.46:191,0,8	1/1:6,0:29:37.82:188,38,0	1/1:1,11:14:32.71:279,33,0	1/1:13,11:25:14.26:381,14,0	0/1:10,9:21:17.90:241,0,18	1/1:4,12:19:31.01:278,31,0	0/0:20,0:20:38.55:0,39,267	0/1:15,1:16:14.63:15,0,66	0/0:20,2:22:16.57:0,17,256	1/1:4,8:12:18.91:169,19,0	1/1:16,6:24:2.98:241,3,0	1/1:13,19:33:5.54:311,6,0	1/1:1,6:8:20.86:182,21,0
chr10	59576583	.	T	TA	515.12	PASS	AB=0.904;AC=11;AF=0.196;AN=56;BaseQRankSum=-3.624;DP=523;FS=1.325;HRun=13;HaplotypeScore=64.9986;InbreedingCoeff=0.2229;MQ=68.61;MQ0=7;MQRankSum=0.198;QD=3.50;ReadPosRankSum=-1.499;VQSLOD=-0.0359;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:11,1:12:4.09:4,0,116	1/1:2,7:9:7.66:141,8,0	0/1:29,1:23:36.45:36,0,73	0/0:16,0:13:9.30:0,9,73	0/0:24,0:27:51.20:0,51,324	0/0:14,1:15:7.77:0,8,194	0/0:14,0:15:38.38:0,38,257	1/1:13,18:31:12.17:355,12,0	0/1:7,1:8:10.17:10,0,75	0/1:17,1:16:1.11:1,0,138	0/0:21,0:23:48.56:0,49,317	0/0:21,0:23:39.19:0,39,243	0/0:20,0:20:40.81:0,41,282	0/0:13,0:13:0.08:0,0,118	0/0:17,1:18:38.64:0,39,267	0/0:27,0:27:50.49:0,50,349	0/1:8,6:14:5.57:96,0,6	0/0:13,0:12:20.45:0,20,142	0/0:20,1:21:21.71:0,22,282	0/0:19,0:19:29.68:0,30,205	0/0:15,0:17:22.17:0,22,136	0/0:18,0:19:4.98:0,5,145	0/1:10,0:10:0.04:0,0,119	0/0:14,0:14:5.62:0,6,159	0/0:21,1:22:7.80:0,8,195	0/0:26,2:29:36.35:0,36,374	0/0:20,1:21:25.04:0,25,304	0/1:12,1:13:4.16:4,0,120
chr10	59578649	.	C	CT	2765.52	PASS	AB=0.600;AC=13;AF=0.232;AN=56;BaseQRankSum=-10.726;DP=645;FS=2.444;HRun=9;HaplotypeScore=66.9731;InbreedingCoeff=0.9367;MQ=74.56;MQ0=0;MQRankSum=-0.385;QD=20.64;ReadPosRankSum=1.235;VQSLOD=4.5321;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:32.93:0,33,286	0/0:12,0:12:29.97:0,30,260	0/0:20,0:19:35.91:0,36,305	0/0:11,0:10:23.99:0,24,208	0/0:31,0:31:77.95:0,78,673	1/1:1,17:19:50.97:545,51,0	0/1:4,8:12:1.99:208,0,2	0/0:32,0:32:65.94:0,66,569	0/0:19,0:19:47.97:0,48,417	0/0:40,0:40:95.97:0,96,833	0/0:18,0:18:35.97:0,36,313	1/1:5,20:25:58.40:631,58,0	1/1:4,10:15:20.89:213,21,0	0/0:13,0:13:32.98:0,33,282	0/0:36,0:36:92.92:0,93,802	0/0:24,0:24:71.99:0,72,625	0/0:16,0:16:38.97:0,39,339	0/0:29,0:29:58.45:0,58,580	0/0:30,0:30:68.92:0,69,587	0/0:24,1:25:38.81:0,39,566	0/0:11,0:11:23.97:0,24,205	1/1:5,19:24:52.05:567,52,0	1/1:8,17:25:19.03:426,19,0	1/1:1,13:14:33.09:365,33,0	0/0:31,0:31:54.81:0,55,638	0/0:39,0:39:99:0,108,934	0/0:34,0:34:86.96:0,87,755	0/0:19,0:19:44.95:0,45,391
chr10	59578677	.	ATTG	A	1980.19	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=6.507;DP=642;FS=2.767;HRun=0;HaplotypeScore=95.4946;InbreedingCoeff=0.9940;MQ=71.09;MQ0=0;MQRankSum=-2.551;QD=37.36;ReadPosRankSum=-1.547;VQSLOD=4.1202;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:61.85:0,62,1291	1/1:0,7:7:18.06:293,18,0	0/0:20,0:19:54.18:0,54,1141	0/0:12,0:11:33.11:0,33,693	0/0:32,0:32:90.31:0,90,2008	0/0:18,0:18:48.16:0,48,1054	0/0:15,0:15:42.14:0,42,936	1/1:3,24:27:72.23:1143,72,0	0/0:19,0:19:54.19:0,54,1206	0/0:35,0:35:99:0,102,2270	0/0:13,0:13:36.12:0,36,804	0/0:27,0:27:75.26:0,75,1675	0/0:10,0:10:18.06:0,18,384	0/0:14,0:14:42.14:0,42,938	0/0:35,0:35:99:0,105,2341	0/0:25,0:25:69.24:0,69,1523	1/1:3,16:19:42.14:685,42,0	0/0:33,0:33:93.28:0,93,1969	0/0:28,0:28:81.26:0,81,1742	0/0:28,0:28:81.28:0,81,1779	0/0:14,0:14:39.13:0,39,869	0/0:27,0:27:78.27:0,78,1704	0/0:24,0:24:66.23:0,66,1473	0/0:14,0:14:42.14:0,42,921	0/0:28,0:28:81.28:0,81,1790	0/0:38,0:38:99:0,105,2287	0/0:32,0:32:96.33:0,96,2140	0/0:23,0:23:69.24:0,69,1534
chr10	59580993	.	CT	C	10449.49	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=17.444;DP=636;FS=12.538;HRun=1;HaplotypeScore=89.5934;InbreedingCoeff=0.9998;MQ=82.74;MQ0=0;MQRankSum=-1.915;QD=38.70;ReadPosRankSum=0.631;VQSLOD=4.1654;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:96.31:0,96,1509	0/0:13,0:13:39.13:0,39,624	0/0:19,0:19:57.15:0,57,875	0/0:18,0:18:47.95:0,48,728	0/0:28,0:28:78.27:0,78,1247	0/0:30,0:30:81.26:0,81,1272	0/0:15,0:15:45.15:0,45,719	0/0:28,0:28:78.27:0,78,1248	0/0:16,0:16:48.14:0,48,721	1/1:0,19:19:57.19:797,57,0	1/1:0,21:21:60.20:838,60,0	0/0:31,0:31:83.94:0,84,1342	0/0:21,0:21:60.20:0,60,959	1/1:0,11:11:26.82:377,27,0	1/1:0,27:27:72.24:1005,72,0	1/1:0,21:21:51.17:713,51,0	0/0:39,0:39:99:0,108,1699	0/0:13,0:13:39.13:0,39,611	1/1:0,16:16:48.15:654,48,0	1/1:0,27:27:78.26:1091,78,0	1/1:0,22:22:66.22:923,66,0	0/0:11,0:11:30.10:0,30,480	0/0:23,0:23:66.22:0,66,1055	0/0:26,0:25:75.26:0,75,1199	1/1:0,25:25:66.22:923,66,0	1/1:0,30:30:90.28:1241,90,0	1/1:0,32:31:77.75:1090,78,0	1/1:0,19:19:57.19:797,57,0
chr10	59581076	.	CT	C	4007.04	PASS	AB=0.704;AC=42;AF=0.750;AN=56;BaseQRankSum=3.945;DP=572;FS=4.861;HRun=15;HaplotypeScore=87.9506;InbreedingCoeff=0.6470;MQ=68.63;MQ0=3;MQRankSum=-0.405;QD=8.56;ReadPosRankSum=4.348;VQSLOD=3.2023;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,1:28:22.44:0,22,291	1/1:3,0:7:6.35:20,6,0	0/0:17,0:11:5.97:0,6,47	0/0:10,0:8:16.15:0,16,86	0/0:26,1:26:20.64:0,21,292	1/1:3,11:15:30.62:185,31,0	0/1:7,9:15:2.74:111,0,3	1/1:7,0:24:29.69:85,30,0	0/0:21,0:22:31.43:0,31,276	1/1:17,17:34:16.05:341,16,0	1/1:15,12:27:38.07:248,38,0	0/1:8,15:23:13.44:157,0,13	1/1:10,11:21:22.39:140,22,0	1/1:5,6:11:14.69:96,15,0	1/1:13,16:30:20.25:261,20,0	1/1:6,8:15:25.58:160,26,0	1/1:11,0:39:44.72:129,45,0	0/1:14,1:13:1.28:1,0,109	1/1:10,2:13:19.60:113,20,0	1/1:7,13:21:23.23:268,23,0	1/1:6,14:21:40.43:256,40,0	1/1:6,9:15:26.25:162,26,0	1/1:6,13:20:19.52:151,20,0	1/1:5,13:18:32.50:211,32,0	1/1:11,13:25:2.51:260,3,0	1/1:8,13:22:19.88:248,20,0	1/1:8,15:23:47.58:305,48,0	0/1:5,6:12:2.49:99,0,2
chr10	59581425	.	G	GT	8420.68	PASS	AB=0.709;AC=45;AF=0.804;AN=56;BaseQRankSum=-5.439;DP=565;FS=11.146;HRun=11;HaplotypeScore=66.8160;InbreedingCoeff=0.6470;MQ=73.10;MQ0=0;MQRankSum=-0.547;QD=17.47;ReadPosRankSum=2.812;VQSLOD=5.3404;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:16:22.16:135,22,0	0/0:9,0:9:17.92:0,18,139	0/1:16,0:16:11.13:11,0,117	0/0:6,0:6:4.99:0,5,29	1/1:30,0:30:65.42:364,65,0	1/1:6,21:28:27.60:433,28,0	1/1:5,15:21:21.56:371,22,0	0/0:41,0:40:49.86:0,50,566	1/1:13,0:13:28.74:149,29,0	1/1:3,18:21:50.92:472,51,0	1/1:1,22:24:33.63:487,34,0	1/1:0,13:13:39.08:396,39,0	1/1:3,9:12:30.06:303,30,0	1/1:1,12:13:24.05:244,24,0	1/1:6,17:23:15.84:342,16,0	1/1:0,18:18:51.10:518,51,0	0/0:23,1:26:33.28:0,33,411	1/1:16,0:16:40.47:215,40,0	1/1:10,16:26:50.86:479,51,0	1/1:0,25:25:66.56:660,67,0	1/1:3,9:14:29.73:272,30,0	0/1:5,12:17:28.47:256,0,28	1/1:2,24:28:33.56:493,34,0	1/1:1,14:16:35.91:349,36,0	1/1:2,18:21:35.23:390,35,0	1/1:6,14:21:44.89:431,45,0	1/1:12,21:35:6.20:487,6,0	0/1:2,11:13:2.19:162,0,2
chr10	59581436	.	T	TTC	2732.44	PASS	AB=0.989;AC=14;AF=0.250;AN=56;BaseQRankSum=-9.148;DP=586;FS=6.979;HRun=0;HaplotypeScore=94.0910;InbreedingCoeff=0.4616;MQ=75.65;MQ0=0;MQRankSum=1.807;QD=13.59;ReadPosRankSum=-0.979;VQSLOD=2.7217;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,13:17:31.61:475,32,0	0/0:8,0:8:24.03:0,24,276	0/0:20,0:19:30.16:0,30,354	0/0:9,0:8:17.91:0,18,149	1/1:2,32:36:77.86:1088,78,0	0/0:29,0:29:19.92:0,20,230	0/0:22,0:22:20.11:0,20,180	0/0:34,0:33:62.42:0,62,1093	1/1:0,13:17:30:494,30,0	0/1:20,0:20:37.67:38,0,127	0/1:26,0:26:6.77:7,0,167	0/0:18,0:18:39.02:0,39,193	0/1:13,1:14:0.99:1,0,96	0/0:16,0:16:26.52:0,27,143	0/0:20,0:20:31.24:0,31,157	0/0:22,0:22:43.28:0,43,194	0/0:27,0:27:76.85:0,77,872	1/1:0,16:19:41.90:673,42,0	0/1:18,0:18:59.40:103,0,59	0/0:29,0:29:55.85:0,56,254	0/1:13,0:13:8.56:9,0,67	0/0:19,0:19:30.04:0,30,181	0/0:29,0:29:16.11:0,16,188	0/0:16,0:16:7.17:0,7,59	0/0:24,0:24:39.66:0,40,196	0/1:20,0:20:19.92:20,0,150	0/0:31,0:31:41.37:0,41,281	0/0:12,0:12:13.91:0,14,73
chr10	59583389	.	CTGGCGTGTGTGTGTGT	C	38.96	PASS	AB=0.938;AC=4;AF=0.071;AN=56;BaseQRankSum=6.650;DP=501;FS=6.451;HRun=0;HaplotypeScore=241.9469;InbreedingCoeff=-0.0823;MQ=82.55;MQ0=14;MQRankSum=-5.557;QD=0.60;ReadPosRankSum=1.375;VQSLOD=1.8458;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:54.19:0,54,1179	0/0:5,0:5:15.02:0,15,224	0/0:30,0:24:67.94:0,68,1395	0/0:41,0:31:84.81:0,85,1633	0/0:13,0:13:21.07:0,21,396	0/0:9,0:9:27.09:0,27,577	0/0:17,0:16:35.79:0,36,783	0/0:26,0:24:66.23:0,66,1377	0/0:16,0:14:38.97:0,39,836	0/0:13,0:13:29.82:0,30,527	0/0:9,0:9:20.83:0,21,427	0/0:25,0:25:66.01:0,66,1424	0/0:14,0:14:39.13:0,39,755	0/0:14,0:14:25.55:0,26,723	0/0:20,0:20:20.93:0,21,884	0/1:22,0:22:30.59:31,0,675	0/1:21,0:19:71.07:71,0,662	0/0:18,0:17:51.17:0,51,983	0/0:17,0:17:50.78:0,51,878	0/1:8,4:12:11.01:11,0,66	0/0:37,0:36:12.03:0,12,172	0/0:17,0:17:12.03:0,12,222	0/0:13,0:13:8.71:0,9,141	0/0:18,0:18:14.77:0,15,418	0/1:10,0:10:33.33:33,0,325	0/0:14,0:14:42.01:0,42,682	0/0:20,0:20:46.71:0,47,902	0/0:10,0:10:25.31:0,25,471
chr10	59583392	.	G	GCC	11832.06	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=0.266;DP=512;FS=11.578;HRun=1;HaplotypeScore=103.8582;InbreedingCoeff=0.7200;MQ=75.66;MQ0=19;MQRankSum=-2.116;QD=26.47;ReadPosRankSum=3.132;VQSLOD=2.8723;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:21,1:21:54.18:846,54,0	1/1:4,0:4:12.04:187,12,0	0/0:26,0:21:43.66:0,44,733	0/0:38,0:27:49.98:0,50,813	1/1:2,13:15:17.89:160,18,0	1/1:9,0:9:27.09:433,27,0	1/1:20,0:18:26.75:409,27,0	1/1:6,23:27:65.28:975,65,0	1/1:16,0:14:35.83:485,36,0	1/1:3,7:11:25.62:391,26,0	1/1:8,0:8:20.89:269,21,0	1/1:24,1:25:63.20:915,63,0	1/1:20,0:20:39.19:574,39,0	1/1:17,0:17:43.66:601,44,0	1/1:20,0:20:49.04:804,49,0	1/1:22,0:22:65.59:851,66,0	1/1:20,1:19:44.89:633,45,0	1/1:16,1:16:45.15:670,45,0	1/1:1,14:15:39.09:573,39,0	1/1:5,8:13:3.01:40,3,0	1/1:4,32:34:3.01:39,3,0	1/1:4,11:15:8.89:92,9,0	1/1:2,10:13:5.15:60,5,0	1/1:5,13:18:6.17:68,6,0	1/1:11,0:11:12.40:223,12,0	1/1:2,12:14:33.07:433,33,0	1/1:22,0:21:45.45:729,45,0	1/1:13,0:12:27.55:372,28,0
chr10	59583393	.	CGTGTGTGTGT	C	1999.70	PASS	AB=0.922;AC=25;AF=0.568;AN=44;BaseQRankSum=0.870;DP=499;FS=15.832;HRun=0;HaplotypeScore=175.3103;InbreedingCoeff=0.1180;MQ=73.19;MQ0=19;MQRankSum=-2.838;QD=7.60;ReadPosRankSum=2.399;VQSLOD=1.6364;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:23:8.39:0,8,165	./.	./.	./.	0/0:14,0:14:3.01:0,3,103	0/0:9,0:9:3.85:0,4,11	0/0:16,0:16:0.82:0,1,25	./.	0/0:16,0:14:3.01:0,3,81	./.	1/1:6,2:8:3.01:87,3,0	0/1:25,0:25:46.57:47,0,48	0/1:18,0:20:14.74:32,0,15	1/1:17,0:17:2.83:83,3,0	1/1:18,2:21:9.03:230,9,0	1/1:16,6:22:30.10:798,30,0	1/1:15,0:19:6.02:139,6,0	0/1:17,0:16:13.96:28,0,14	1/1:12,0:12:3.01:47,3,0	0/1:12,0:12:0:0,0,0	./.	0/1:12,0:15:16.22:16,0,58	0/1:11,0:12:5.76:6,0,46	0/0:15,0:17:8.98:0,9,82	0/1:8,2:11:16.06:234,0,16	1/1:15,0:15:4.51:75,5,0	1/1:19,3:21:8.56:218,9,0	1/1:13,0:12:5.85:96,6,0
chr10	59584707	.	CT	C	9408.33	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-6.014;DP=507;FS=8.120;HRun=10;HaplotypeScore=64.8416;InbreedingCoeff=0.8734;MQ=79.16;MQ0=2;MQRankSum=-2.461;QD=20.50;ReadPosRankSum=4.354;VQSLOD=5.5921;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,21:25:56.98:495,57,0	1/1:0,6:6:15:130,15,0	0/0:27,0:18:29.91:0,30,198	0/0:21,0:17:2.37:0,2,141	1/1:1,26:28:74.01:630,74,0	1/1:4,14:18:38.98:339,39,0	1/1:0,11:11:26.99:234,27,0	1/1:9,24:33:68.93:593,69,0	1/1:0,7:7:18:156,18,0	1/1:2,15:17:44.99:391,45,0	1/1:5,20:25:47.97:416,48,0	1/1:2,10:12:26.99:234,27,0	1/1:2,9:11:20.99:182,21,0	1/1:0,9:9:26.99:234,27,0	1/1:1,14:15:35.98:309,36,0	1/1:1,23:24:56.99:495,57,0	1/1:2,22:24:27.39:462,27,0	1/1:1,14:15:35.99:313,36,0	1/1:3,14:17:41.98:365,42,0	1/1:5,18:23:53.98:468,54,0	1/1:1,13:14:35.99:313,36,0	1/1:1,9:10:26.99:234,27,0	1/1:2,13:15:35.99:313,36,0	1/1:0,9:9:24:208,24,0	1/1:4,19:23:59.93:513,60,0	1/1:0,15:15:44.99:391,45,0	1/1:6,31:37:80.98:703,81,0	1/1:5,11:16:32.97:286,33,0
chr10	59586468	.	CAG	C	312.08	PASS	AB=1.000;AC=10;AF=0.227;AN=44;BaseQRankSum=1.193;DP=544;FS=20.755;HRun=0;HaplotypeScore=88.1315;InbreedingCoeff=0.4509;MQ=56.58;MQ0=26;MQRankSum=1.644;QD=2.69;ReadPosRankSum=2.559;VQSLOD=0.3894;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:21:8.82:76,9,0	./.	./.	0/0:47,0:26:0:0,0,0	1/1:13,0:13:8.78:96,9,0	0/0:11,0:11:0.89:0,1,2	0/0:20,0:20:3:0,3,25	./.	0/1:11,0:11:16.72:85,0,17	0/1:11,0:11:5.08:5,0,10	0/0:17,0:16:5.92:0,6,41	0/0:24,0:23:14.74:0,15,115	0/0:17,0:17:3.01:0,3,35	0/0:16,0:16:0:0,0,0	0/0:19,0:19:11.58:0,12,88	0/0:28,0:28:14.16:0,14,103	1/1:23,5:31:2.67:31,3,0	1/1:28,0:25:15:149,15,0	0/0:18,0:18:13.56:0,14,103	0/0:15,0:13:2.04:0,2,6	0/0:35,0:31:6:0,6,51	./.	./.	0/0:26,0:26:11.96:0,12,93	0/0:13,0:13:2.82:0,3,26	0/0:30,0:29:24.70:0,25,203	0/0:15,0:14:20.73:0,21,152	./.
chr10	59586515	.	A	AGCGTGCGAGCGT	1994.62	PASS	AB=0.847;AC=20;AF=0.357;AN=56;BaseQRankSum=-5.294;DP=550;FS=9.341;HRun=0;HaplotypeScore=198.5146;InbreedingCoeff=0.1089;MQ=50.58;MQ0=23;MQRankSum=-1.693;QD=6.67;ReadPosRankSum=-1.265;VQSLOD=1.7737;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:19,0:17:18.91:19,0,32	0/0:4,0:4:6.02:0,6,186	0/0:28,0:7:13.72:0,14,339	0/0:38,0:16:10.54:0,11,424	0/1:6,0:11:1.34:22,0,1	1/1:18,0:17:11.80:278,12,0	1/1:39,0:38:40.95:859,41,0	0/0:22,0:22:38.90:0,39,351	0/1:8,0:16:54.04:54,0,54	0/0:16,0:15:30.64:0,31,662	1/1:11,0:10:2.37:8,2,0	0/1:8,17:32:18.98:115,0,19	0/1:5,11:19:19.24:102,0,19	0/0:14,0:20:27.09:0,27,667	0/0:13,0:15:16.46:0,16,321	0/0:23,0:22:13.77:0,14,891	0/1:25,0:25:17.58:18,0,202	0/1:17,0:15:24.78:192,0,25	0/1:23,0:22:32.34:32,0,447	0/0:13,0:11:7.26:0,7,72	0/0:19,0:34:28.86:0,29,700	1/1:7,0:7:2.53:49,3,0	1/1:9,0:8:2.96:19,3,0	0/1:25,0:24:7.54:348,0,8	0/0:7,0:7:6.01:0,6,107	0/1:27,0:27:47.72:48,0,840	0/0:19,0:19:35.29:0,35,682	0/0:6,0:6:2.69:0,3,82
chr10	59586520	.	GCGTGCGAGCGTT	G	1792.61	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=6.251;DP=556;FS=1.171;HRun=0;HaplotypeScore=189.9310;InbreedingCoeff=0.1209;MQ=52.36;MQ0=18;MQRankSum=1.272;QD=6.74;ReadPosRankSum=3.130;VQSLOD=2.3201;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:32:52.09:0,52,862	1/1:0,4:4:6.02:220,6,0	0/0:30,0:8:21.07:0,21,863	0/1:42,0:20:17.18:17,0,919	0/0:17,0:17:17.69:0,18,301	0/0:16,0:15:29.82:0,30,830	0/0:35,0:34:39.44:0,39,1760	1/1:3,18:21:53.80:1224,54,0	0/0:22,0:22:32.19:0,32,485	0/1:17,0:15:7.88:8,0,277	0/0:11,0:10:3.01:0,3,42	0/1:29,0:29:29.81:30,0,322	0/0:16,0:16:9.03:0,9,338	0/1:19,0:19:13.31:13,0,104	0/0:12,0:10:6.62:0,7,147	0/0:21,0:19:2.76:0,3,165	1/1:10,17:27:12.04:377,12,0	0/0:26,0:24:63.07:0,63,1628	0/1:25,0:24:6.10:6,0,310	0/0:9,0:8:8.96:0,9,157	0/1:31,0:31:11.55:12,0,260	0/0:7,0:7:5.98:0,6,61	0/0:8,0:7:5.97:0,6,59	0/0:26,0:25:0.23:0,0,726	1/1:4,0:4:2.50:9,2,0	0/1:25,0:25:24.99:25,0,567	0/1:17,0:17:9.34:9,0,265	0/1:5,0:5:1.33:1,0,8
chr10	59586532	.	TCGAGCGTG	T	7956.14	PASS	AB=1.000;AC=28;AF=0.500;AN=56;BaseQRankSum=4.564;DP=522;FS=6.454;HRun=0;HaplotypeScore=148.8768;InbreedingCoeff=0.8051;MQ=61.30;MQ0=5;MQRankSum=3.153;QD=36.66;ReadPosRankSum=5.065;VQSLOD=3.8211;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:52.37:0,52,884	0/1:6,0:6:15.97:97,0,16	0/0:21,0:8:15.05:0,15,464	0/0:38,0:26:23.72:0,24,879	0/0:18,0:18:24.07:0,24,377	0/0:19,0:19:44.84:0,45,1020	0/0:38,0:38:78.51:0,79,1725	0/1:21,0:21:4.72:367,0,5	0/0:19,0:19:17.06:0,17,297	1/1:3,17:20:51.10:844,51,0	1/1:1,6:7:2.94:18,3,0	0/0:33,0:33:32.98:0,33,656	0/0:17,0:17:24.08:0,24,544	1/1:17,0:17:39.09:837,39,0	1/1:9,0:9:21.02:386,21,0	1/1:20,0:20:60.21:1313,60,0	1/1:19,0:19:9.50:160,10,0	0/0:25,0:23:59.15:0,59,1113	1/1:2,18:20:53.87:832,54,0	1/1:2,8:10:17.76:116,18,0	1/1:25,0:25:54.01:992,54,0	0/0:8,0:8:5.99:0,6,59	0/0:7,0:7:12.04:0,12,177	0/0:23,0:23:20.54:0,21,642	1/1:2,0:2:6.02:133,6,0	1/1:4,15:19:39.13:780,39,0	1/1:16,0:16:37.84:796,38,0	1/1:6,0:6:18.03:283,18,0
chr10	59587951	.	AGGTTCCGGGAGTAGGCCT	A	2329.84	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=7.578;DP=674;FS=1.827;HRun=0;HaplotypeScore=312.7084;InbreedingCoeff=0.9773;MQ=82.82;MQ0=0;MQRankSum=-3.630;QD=54.18;ReadPosRankSum=-1.281;VQSLOD=2.6003;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,120,9281	1/1:2,5:7:12.04:553,12,0	0/0:29,0:29:74.27:0,74,4140	0/0:25,0:25:63.19:0,63,3525	0/0:34,0:34:93.28:0,93,7288	0/0:23,0:23:69.24:0,69,5599	0/0:29,0:29:78.27:0,78,5985	1/1:11,13:24:39.11:1303,39,0	0/0:12,0:12:36.12:0,36,2925	0/0:30,0:30:84.26:0,84,6046	0/0:22,0:22:57.18:0,57,4398	0/0:39,0:39:99:0,111,8499	0/0:20,0:20:48.16:0,48,3758	0/0:25,0:25:72.25:0,72,5618	0/0:34,0:34:93.32:0,93,7091	0/0:20,0:20:51.18:0,51,4081	1/1:5,7:12:12.04:609,12,0	0/0:12,0:12:30.10:0,30,2359	0/0:25,0:25:72.24:0,72,4920	0/0:29,0:29:78.27:0,78,5984	0/0:29,0:29:78.27:0,78,6232	0/0:19,0:19:48.11:0,48,3249	0/0:19,0:19:51.16:0,51,3991	0/0:18,0:18:51.13:0,51,3634	0/0:29,0:29:81.28:0,81,6277	0/0:24,0:24:69.24:0,69,5639	0/0:31,0:30:87.28:0,87,6599	0/0:11,0:11:33.11:0,33,2792
chr10	59590063	.	C	CAAAT	31750.68	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-9.335;DP=685;FS=13.302;HRun=0;HaplotypeScore=91.5992;InbreedingCoeff=0.9997;MQ=84.47;MQ0=3;MQRankSum=-8.926;QD=57.73;ReadPosRankSum=5.607;VQSLOD=5.8759;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,24:24:51.18:1315,51,0	0/0:13,0:13:39.12:0,39,681	0/0:29,0:29:62.78:0,63,1125	0/0:19,0:19:42.14:0,42,722	1/1:3,26:30:66.18:1669,66,0	1/1:5,28:34:81.28:2134,81,0	1/1:1,22:23:48.16:1264,48,0	0/0:46,0:45:99:0,126,2133	1/1:4,17:24:36.12:948,36,0	1/1:4,23:26:72.25:1759,72,0	1/1:4,16:20:48.16:1256,48,0	1/1:3,19:22:54.19:1422,54,0	1/1:4,16:21:39.13:1028,39,0	1/1:2,17:19:54.19:1408,54,0	1/1:8,15:26:36.12:945,36,0	1/1:0,16:17:36.07:949,36,0	0/0:28,0:27:72.25:0,72,1323	1/1:1,11:14:33.11:865,33,0	1/1:4,11:15:33.11:860,33,0	1/1:6,34:40:96.29:2473,96,0	1/1:2,15:17:42.14:1108,42,0	1/1:2,19:20:51.18:1343,51,0	1/1:4,25:29:72.25:1881,72,0	1/1:2,22:24:48.08:1203,48,0	1/1:2,17:20:42.14:1106,42,0	1/1:5,22:27:66.21:1634,66,0	1/1:2,35:37:87.26:2233,87,0	1/1:5,13:18:36.12:949,36,0
chr10	59591534	.	GT	G	9910.94	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=5.952;DP=666;FS=0.289;HRun=3;HaplotypeScore=89.4105;InbreedingCoeff=0.9914;MQ=83.15;MQ0=0;MQRankSum=-1.163;QD=34.41;ReadPosRankSum=2.242;VQSLOD=5.2455;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,123,1706	0/0:9,0:9:24.08:0,24,346	0/0:17,0:17:38.94:0,39,524	0/0:22,0:22:63.20:0,63,861	0/0:17,0:17:48.15:0,48,669	0/0:19,0:19:54.18:0,54,777	0/0:27,0:27:78.26:0,78,1123	0/0:24,0:24:63.21:0,63,892	0/0:23,0:23:69.23:0,69,994	1/1:0,21:21:63.20:780,63,0	1/1:0,11:11:27.08:335,27,0	0/0:28,0:28:84.24:0,84,1182	0/0:29,0:29:84.27:0,84,1192	1/1:0,29:29:87.27:1078,87,0	1/1:1,47:48:99:1636,132,0	1/1:0,26:26:78.25:967,78,0	0/0:33,0:33:99:0,99,1404	0/0:26,0:26:75.21:0,75,1057	1/1:0,17:17:51.16:631,51,0	1/1:0,17:17:45.14:557,45,0	1/1:1,35:36:93.29:1153,93,0	0/0:20,0:20:60.17:0,60,825	0/0:13,0:13:33.11:0,33,474	0/0:28,0:28:81.27:0,81,1167	1/1:1,22:23:60.19:744,60,0	1/1:1,29:30:84.25:1028,84,0	1/1:1,26:27:72.23:891,72,0	1/1:0,3:3:9.03:111,9,0
chr10	59592741	.	CCTTTTCTTTTCTTTTCTTTT	C	1374.89	PASS	AB=0.933;AC=7;AF=0.130;AN=54;BaseQRankSum=2.799;DP=735;FS=6.827;HRun=0;HaplotypeScore=272.4640;InbreedingCoeff=0.7262;MQ=39.62;MQ0=74;MQRankSum=-1.973;QD=18.58;ReadPosRankSum=0.419;VQSLOD=1.5899;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:18,12:27:6.02:311,6,0	0/0:11,0:11:27.09:0,27,1846	./.	0/0:126,0:18:6.96:0,7,97	1/1:15,4:17:12:408,12,0	0/0:18,0:19:42.14:0,42,2881	0/0:19,0:18:24.08:0,24,1564	0/0:32,0:30:18.06:0,18,730	1/1:3,8:10:12.04:636,12,0	0/0:24,0:23:42.14:0,42,2880	0/0:18,0:17:36.12:0,36,2143	0/0:14,0:12:21.07:0,21,1079	0/0:9,0:16:21.07:0,21,1214	0/0:11,0:11:27.09:0,27,1807	0/0:30,0:28:48.16:0,48,3253	0/0:19,0:18:24.08:0,24,1624	0/0:20,0:18:31.53:0,32,1923	0/1:13,1:13:99:153,0,228	0/0:18,0:17:18.06:0,18,1327	0/0:31,0:29:72.25:0,72,4648	0/0:26,0:22:21.07:0,21,1067	0/0:24,0:24:45.15:0,45,2524	0/0:17,0:17:24.08:0,24,1373	0/0:25,0:22:39.13:0,39,2396	0/0:17,0:16:21.07:0,21,1252	0/0:23,0:22:39.13:0,39,2557	0/0:14,0:14:36.12:0,36,2227	0/0:7,0:6:9.03:0,9,656
chr10	59592936	.	CTA	C	16673	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=5.351;DP=694;FS=4.228;HRun=0;HaplotypeScore=92.6766;InbreedingCoeff=0.9995;MQ=87.79;MQ0=0;MQRankSum=-5.503;QD=40.67;ReadPosRankSum=5.229;VQSLOD=6.9366;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,51:51:99:1836,120,0	0/0:9,0:9:24.08:0,24,463	0/0:30,0:30:90.27:0,90,1632	0/0:22,0:22:60.16:0,60,1080	1/1:1,25:26:75.21:1112,75,0	0/0:26,0:26:72.25:0,72,1379	0/0:26,0:26:75.13:0,75,1446	0/0:38,0:38:99:0,111,2005	1/1:0,25:25:63.21:963,63,0	1/1:0,22:22:66.20:985,66,0	1/1:1,18:19:45.15:688,45,0	0/0:15,0:15:45.15:0,45,862	0/0:23,0:23:66.23:0,66,1274	1/1:0,21:21:60.20:916,60,0	1/1:0,30:30:75.25:1147,75,0	1/1:2,12:14:27.09:413,27,0	0/0:27,0:27:81.22:0,81,1492	1/1:1,22:23:63.21:959,63,0	1/1:1,24:25:72.22:1045,72,0	1/1:0,23:23:69.19:1030,69,0	1/1:0,46:46:99:1883,123,0	0/0:15,0:15:42.14:0,42,811	0/0:21,0:21:63.22:0,63,1215	0/0:32,0:31:90.31:0,90,1713	1/1:0,16:16:45.15:689,45,0	1/1:0,31:31:93.24:1354,93,0	1/1:0,28:28:78.26:1193,78,0	1/1:0,10:10:30.10:459,30,0
chr10	59593471	.	T	TA	4868.38	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-12.549;DP=742;FS=7.354;HRun=2;HaplotypeScore=69.0422;InbreedingCoeff=0.9996;MQ=86.53;MQ0=0;MQRankSum=-1.693;QD=37.74;ReadPosRankSum=2.676;VQSLOD=5.4993;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,38:41:99:1531,108,0	0/0:10,0:10:27.05:0,27,308	0/0:23,0:23:63.18:0,63,749	0/0:26,0:26:69.06:0,69,810	1/1:1,36:37:99:1402,99,0	0/0:25,0:25:72.21:0,72,880	0/0:31,0:31:87.26:0,87,1065	0/0:33,0:33:99:0,99,1185	1/1:0,23:23:60.20:864,60,0	0/0:40,0:40:99:0,114,1413	0/0:17,0:17:51.16:0,51,632	0/0:29,0:29:84.24:0,84,1015	0/0:26,0:26:72.22:0,72,882	0/0:19,0:19:51.15:0,51,620	0/0:34,0:34:99:0,99,1202	0/0:32,1:33:53.09:0,53,1097	0/0:23,0:23:66.19:0,66,805	1/1:1,27:28:69.52:1072,70,0	0/0:18,0:18:54.15:0,54,645	0/0:24,0:24:69.21:0,69,843	0/0:42,0:42:99:0,126,1533	0/0:21,0:21:60.19:0,60,743	0/0:19,0:19:51.14:0,51,615	0/0:37,0:37:99:0,111,1362	0/0:25,0:25:75.24:0,75,930	0/0:24,0:24:66.21:0,66,818	0/0:23,0:23:63.18:0,63,767	0/0:11,0:11:33.10:0,33,409
chr10	59594120	.	G	GAA	7373.64	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=2.097;DP=598;FS=4.609;HRun=11;HaplotypeScore=159.2969;InbreedingCoeff=0.9358;MQ=61.36;MQ0=3;MQRankSum=-4.435;QD=18.76;ReadPosRankSum=0.217;VQSLOD=2.3423;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:37:80.80:0,81,768	0/0:14,0:14:36.03:0,36,344	0/0:22,0:13:21.98:0,22,123	0/0:13,0:5:8.97:0,9,82	0/0:25,0:24:44.32:0,44,477	1/1:3,1:16:4.36:109,4,0	1/1:5,1:16:20.48:103,20,0	0/0:19,0:20:35.99:0,36,395	0/0:21,0:21:45.02:0,45,436	1/1:9,16:25:45.04:568,45,0	1/1:3,22:26:57.06:754,57,0	1/1:6,0:24:17.49:127,17,0	1/1:5,0:20:39.86:169,40,0	1/1:4,14:19:35.83:497,36,0	1/1:4,11:17:35.05:451,35,0	1/1:2,11:13:23.57:312,24,0	0/0:34,0:33:80.95:0,81,821	0/0:18,0:18:45.04:0,45,436	1/1:8,7:14:24.07:331,24,0	1/1:13,29:45:89.08:1109,89,0	1/1:4,2:5:0.47:1,0,0	1/1:6,1:20:30.93:139,31,0	1/1:3,0:12:12.48:43,12,0	1/1:6,1:25:46.13:226,46,0	1/1:3,17:21:48.16:679,48,0	1/1:5,13:23:50.95:576,51,0	1/1:10,22:34:30.56:744,31,0	1/1:1,12:13:30.10:434,30,0
chr10	59596999	.	GGTGGTTGTTGTT	G	22858.33	PASS	AB=0.601;AC=44;AF=0.786;AN=56;BaseQRankSum=5.643;DP=706;FS=15.740;HRun=0;HaplotypeScore=207.6677;InbreedingCoeff=0.6332;MQ=60.21;MQ0=3;MQRankSum=-8.473;QD=38.94;ReadPosRankSum=5.925;VQSLOD=2.8346;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:1,0:48:30.53:330,0,31	0/0:9,0:9:0.06:0,0,501	0/0:19,0:14:22.10:0,22,327	0/0:38,0:28:68.21:0,68,1053	0/1:13,0:23:70.50:267,0,71	1/1:1,27:28:33.11:1190,33,0	1/1:2,28:30:30.10:1072,30,0	0/0:23,0:23:66.16:0,66,1612	1/1:2,0:26:1.26:364,1,0	1/1:3,24:28:81.09:1620,81,0	1/1:0,7:7:20.98:526,21,0	1/1:0,28:29:45.15:1538,45,0	1/1:1,31:32:50.96:1927,51,0	1/1:0,27:27:39.13:1410,39,0	1/1:0,25:25:42.14:1587,42,0	1/1:0,33:34:46.57:1732,47,0	0/0:30,0:30:78.08:0,78,1793	1/1:1,0:19:16.76:173,17,0	1/1:2,19:21:56.78:836,57,0	1/1:1,23:24:59.69:1117,60,0	1/1:0,35:35:9.03:329,9,0	1/1:0,20:20:37:825,37,0	1/1:1,14:15:8.88:339,9,0	1/1:1,27:27:11.62:237,12,0	1/1:0,21:21:27.05:927,27,0	1/1:1,23:24:5.69:1937,6,0	1/1:1,36:37:63.06:2235,63,0	1/1:0,5:5:9.03:341,9,0
chr10	59597002	.	GGTT	G	5242.63	PASS	AC=52;AF=0.963;AN=54;BaseQRankSum=2.530;DP=694;FS=5.217;HRun=0;HaplotypeScore=191.2466;InbreedingCoeff=0.5450;MQ=60.30;MQ0=3;MQRankSum=-2.411;QD=8.20;ReadPosRankSum=2.792;VQSLOD=4.2234;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:47,0:47:32.74:230,33,0	1/1:5,4:9:12.04:161,12,0	./.	0/0:36,0:27:6:0,6,74	1/1:24,0:24:17.82:123,18,0	1/1:27,0:27:29.76:209,30,0	1/1:29,0:29:26.78:189,27,0	1/1:12,10:22:30.02:310,30,0	1/1:26,0:25:35.71:251,36,0	1/1:27,0:27:29.76:209,30,0	1/1:7,0:7:11.90:84,12,0	1/1:29,0:29:36.18:252,36,0	1/1:31,0:31:50.51:356,51,0	1/1:27,0:27:35.71:251,36,0	1/1:25,0:25:41.66:293,42,0	1/1:34,0:34:47.45:334,47,0	1/1:14,17:31:18.18:500,18,0	1/1:18,0:18:15.34:104,15,0	1/1:19,0:19:8.93:63,9,0	1/1:23,0:23:20.83:147,21,0	1/1:35,0:35:8.70:53,9,0	1/1:20,0:20:15.80:106,16,0	1/1:14,0:14:8.82:63,9,0	1/1:28,0:27:2.97:21,3,0	1/1:21,0:21:23.81:168,24,0	1/1:24,0:24:44.46:306,44,0	1/1:37,0:37:56.37:398,56,0	1/1:5,0:5:8.93:63,9,0
chr10	59597436	.	A	ATTT	9992.67	PASS	AB=0.705;AC=45;AF=0.804;AN=56;BaseQRankSum=-0.285;DP=524;FS=6.370;HRun=10;HaplotypeScore=83.0532;InbreedingCoeff=0.6322;MQ=67.84;MQ0=2;MQRankSum=-1.895;QD=22.21;ReadPosRankSum=0.643;VQSLOD=3.0886;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,0:25:28.70:113,29,0	0/0:8,0:8:24.07:0,24,292	0/1:10,0:9:37.75:38,0,78	0/0:16,0:11:20.64:0,21,200	1/1:2,0:27:35.57:137,36,0	1/1:3,0:16:14.95:35,15,0	1/1:2,0:11:8.72:20,9,0	0/0:25,0:25:66.15:0,66,781	1/1:2,0:18:17.44:41,17,0	1/1:5,16:23:57.09:967,57,0	1/1:2,18:21:57.14:1024,57,0	0/1:2,0:17:14.30:38,0,14	0/1:6,0:21:17.56:20,0,18	1/1:1,7:12:21.05:352,21,0	1/1:4,18:24:42.12:743,42,0	1/1:2,16:20:39.13:718,39,0	0/0:24,0:24:47.40:0,47,561	1/1:1,0:12:12.46:29,12,0	1/1:6,19:29:66.07:944,66,0	1/1:2,12:19:44.99:623,45,0	1/1:2,9:11:21.04:368,21,0	1/1:0,0:7:8.72:20,9,0	1/1:1,0:20:19.50:52,20,0	1/1:1,0:13:17.94:59,18,0	1/1:2,16:19:39.13:735,39,0	1/1:3,19:25:60.17:1020,60,0	1/1:3,25:29:61.45:1149,61,0	1/1:0,19:19:39.13:747,39,0
chr10	59597667	.	TTTTTTA	T	1480.26	PASS	AB=0.994;AC=26;AF=0.464;AN=56;BaseQRankSum=11.391;DP=393;FS=3.082;HRun=0;HaplotypeScore=80.1211;InbreedingCoeff=-0.4413;MQ=44.93;MQ0=54;MQRankSum=-4.720;QD=4.81;ReadPosRankSum=9.259;VQSLOD=0.2443;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:20:85.10:85,0,127	0/1:3,0:3:0.50:1,0,20	0/0:19,0:5:11.33:0,11,79	0/0:22,0:4:6.02:0,6,76	0/1:20,0:19:30.17:116,0,30	0/1:13,0:13:39.30:39,0,122	0/1:13,0:11:34.08:38,0,34	0/0:28,0:26:54.91:0,55,493	1/1:10,0:8:6.94:95,7,0	0/1:10,0:7:26.36:89,0,26	0/1:21,0:20:76.50:77,0,168	0/1:5,0:5:27.69:28,0,47	0/1:15,0:13:40.57:41,0,66	1/1:9,1:5:5.63:96,6,0	0/1:12,0:10:29.49:136,0,29	0/1:14,1:15:17.19:140,0,17	0/1:20,0:16:13.26:13,0,183	0/1:17,0:15:42.86:43,0,172	0/1:10,0:6:46.22:48,0,46	0/1:20,0:17:18.44:18,0,112	0/0:8,0:7:8.27:0,8,35	0/1:3,0:2:18.45:25,0,18	0/1:10,0:9:4.64:5,0,123	0/0:8,0:7:14.82:0,15,104	1/1:12,1:10:14.59:173,15,0	0/1:11,0:8:32.87:33,0,72	0/1:14,1:12:38.84:129,0,39	0/1:20,0:13:15.84:174,0,16
chr10	59597775	.	A	AT	3875.84	PASS	AB=0.668;AC=28;AF=0.500;AN=56;BaseQRankSum=-8.151;DP=443;FS=19.278;HRun=11;HaplotypeScore=48.6216;InbreedingCoeff=0.4957;MQ=79.26;MQ0=3;MQRankSum=-0.934;QD=14.35;ReadPosRankSum=2.446;VQSLOD=2.1596;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,20:25:2.46:353,2,0	0/0:6,0:6:14.94:0,15,116	0/0:39,1:23:11.05:0,11,115	0/0:26,0:19:13.98:0,14,116	1/1:3,8:11:3.82:220,4,0	0/0:17,0:18:16.31:0,16,258	0/0:8,0:8:20.92:0,21,163	0/1:19,2:21:12.99:13,0,214	0/1:5,7:12:11.21:79,0,11	1/1:5,8:13:21.04:213,21,0	0/1:4,11:15:8.28:230,0,8	0/0:10,0:11:28.92:0,29,213	0/0:15,1:18:15.42:0,15,279	1/1:1,5:6:6.01:61,6,0	1/1:1,10:11:24.05:244,24,0	0/1:5,9:14:2.18:162,0,2	0/0:25,0:26:73.72:0,74,557	1/1:6,17:23:18.89:373,19,0	0/1:6,5:11:45.57:109,0,46	1/1:3,14:17:26.42:252,26,0	1/1:1,6:7:15.03:152,15,0	0/0:1,0:1:2.99:0,3,23	0/0:13,0:13:34.55:0,35,237	0/0:5,0:5:11.94:0,12,93	1/1:3,13:16:6.74:237,7,0	1/1:7,20:29:62.93:605,63,0	0/1:5,11:16:34.51:237,0,35	1/1:6,16:22:33.07:335,33,0
chr10	59598131	.	T	TTGTGTGTGTGTGTG	15317.19	PASS	AB=0.879;AC=48;AF=0.857;AN=56;BaseQRankSum=-5.400;DP=665;FS=4.821;HRun=0;HaplotypeScore=265.5713;InbreedingCoeff=0.5681;MQ=57.26;MQ0=6;MQRankSum=-3.091;QD=25.61;ReadPosRankSum=0.812;VQSLOD=3.5113;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:27:9:107,9,0	0/0:2,0:9:19.30:0,19,308	0/0:27,0:22:2.95:0,3,19	0/1:24,0:18:0.42:0,0,160	1/1:18,6:26:12.04:675,12,0	1/1:29,0:29:13.40:483,13,0	1/1:23,0:26:30.10:1027,30,0	0/1:17,0:24:68.96:69,0,176	1/1:25,1:25:15.45:618,15,0	1/1:32,0:37:48.15:2089,48,0	1/1:18,0:18:12.03:446,12,0	1/1:19,0:20:16.71:442,17,0	1/1:16,0:24:19.71:635,20,0	1/1:22,0:21:6.02:281,6,0	1/1:22,5:28:6.03:594,6,0	1/1:25,1:27:15.72:1094,16,0	0/0:17,0:31:24.06:0,24,422	1/1:13,0:12:6.02:177,6,0	1/1:18,0:18:17.09:784,17,0	1/1:20,6:28:6.02:402,6,0	1/1:21,0:20:13.54:146,14,0	1/1:16,0:23:19.74:708,20,0	1/1:17,0:21:12.76:515,13,0	1/1:18,0:27:8.15:317,8,0	1/1:20,4:28:9.03:518,9,0	1/1:26,0:26:24.07:1231,24,0	1/1:24,0:24:27.07:1199,27,0	1/1:7,0:7:12.04:760,12,0
chr10	59598642	.	TTTTTTGG	T	1547.97	PASS	AB=0.979;AC=13;AF=0.232;AN=56;BaseQRankSum=9.824;DP=448;FS=44.011;HRun=0;HaplotypeScore=104.1284;InbreedingCoeff=-0.1088;MQ=43.41;MQ0=26;MQRankSum=-3.043;QD=8.23;ReadPosRankSum=2.100;VQSLOD=0.2841;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:27:68.11:0,68,1421	0/0:5,0:5:4.90:0,5,273	1/1:21,0:7:1.78:12,2,0	0/0:23,0:6:12.17:0,12,154	0/0:31,0:29:54.21:0,54,1095	0/0:14,0:11:21.89:0,22,544	0/0:10,0:9:18.06:0,18,486	0/0:22,0:20:49.67:0,50,795	0/0:15,0:14:35.85:0,36,692	0/1:17,0:16:81.47:120,0,81	0/1:9,0:8:4.22:133,0,4	0/0:13,0:12:29.83:0,30,507	0/0:12,0:12:18.99:0,19,498	0/1:11,0:11:27.76:28,0,80	0/1:15,2:16:64.38:182,0,64	0/1:15,0:14:75.64:189,0,76	0/0:19,0:15:17.60:0,18,274	0/0:19,0:16:22.26:0,22,395	0/1:20,0:18:99:246,0,117	0/1:14,0:11:29.87:79,0,30	0/0:8,0:6:6.95:0,7,42	0/0:13,0:12:19.83:0,20,451	0/0:19,0:18:45.23:0,45,913	0/0:9,0:5:6.02:0,6,135	0/1:17,1:16:53.32:191,0,53	0/1:22,2:24:50.87:329,0,51	0/1:14,0:14:32.72:139,0,33	0/1:8,0:6:3.89:50,0,4
chr10	59598643	.	TTTTTGG	T	1527.78	PASS	AB=0.982;AC=20;AF=0.357;AN=56;BaseQRankSum=9.769;DP=430;FS=22.238;HRun=0;HaplotypeScore=93.7730;InbreedingCoeff=0.3456;MQ=43.47;MQ0=25;MQRankSum=-2.616;QD=8.49;ReadPosRankSum=2.217;VQSLOD=-0.0737;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:27:64.23:0,64,1219	0/0:5,0:5:4.64:0,5,232	1/1:18,0:5:2.64:13,3,0	0/0:21,0:6:8.61:0,9,106	0/0:30,0:28:53.33:0,53,924	0/0:14,0:11:21.59:0,22,477	0/0:11,0:9:18.06:0,18,414	0/0:22,0:20:47.46:0,47,705	0/0:16,0:15:34.65:0,35,626	0/1:15,0:14:33.63:126,0,34	1/1:7,0:6:12.51:145,13,0	0/0:13,0:12:31.91:0,32,456	0/0:12,0:12:19.29:0,19,420	1/1:10,0:10:1.14:39,1,0	0/1:16,1:16:4.92:172,0,5	0/1:15,0:14:31.04:187,0,31	0/0:18,0:14:12.15:0,12,223	0/0:19,0:16:24.86:0,25,372	0/1:17,1:16:59.75:242,0,60	1/1:9,2:8:4.79:81,5,0	0/1:7,0:5:12.99:13,0,14	0/0:13,0:12:19.62:0,20,389	0/0:19,0:18:44.55:0,45,795	0/0:9,0:5:6.02:0,6,125	1/1:16,1:16:0.26:189,0,0	1/1:20,2:22:10.59:333,11,0	0/1:14,0:14:21.26:112,0,21	1/1:7,1:6:5.41:47,5,0
chr10	59598647	.	TGGTTC	T	2188.12	PASS	AB=0.875;AC=27;AF=0.482;AN=56;BaseQRankSum=5.473;DP=340;FS=10.073;HRun=0;HaplotypeScore=69.2435;InbreedingCoeff=0.2965;MQ=39.70;MQ0=24;MQRankSum=-4.554;QD=12.58;ReadPosRankSum=1.890;VQSLOD=1.0986;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:25:56.09:0,56,1104	0/1:5,0:5:20.22:20,0,151	1/1:7,0:3:2.37:8,2,0	0/0:11,0:3:6.36:0,6,88	0/0:27,0:26:46.49:0,46,800	0/1:14,0:10:24.71:25,0,427	0/0:12,0:9:17.89:0,18,300	0/0:18,0:15:45.15:0,45,884	0/0:15,0:14:18.70:0,19,460	1/1:3,6:8:5.16:246,5,0	0/1:5,4:7:6.13:194,0,6	0/0:13,0:12:21.51:0,22,532	0/1:14,0:14:4.02:4,0,503	1/1:2,1:3:4.56:42,5,0	1/1:5,4:8:15.05:227,15,0	0/1:4,8:11:11.37:295,0,11	0/1:18,0:14:18.68:19,0,149	0/0:17,0:14:8.68:0,9,262	0/1:7,4:10:44.61:342,0,45	1/1:6,2:4:7.57:83,8,0	1/1:3,1:2:1.55:4,2,0	0/1:14,0:13:2.47:2,0,381	0/0:16,0:15:21.39:0,21,716	0/0:9,0:5:6.02:0,6,150	1/1:6,6:11:11.30:221,11,0	1/1:5,7:12:16.01:483,16,0	1/1:5,0:5:9.03:117,9,0	0/1:6,1:5:1.88:34,0,2
chr10	59598660	.	T	TC	1479.45	PASS	AC=24;AF=0.462;AN=52;BaseQRankSum=5.948;DP=336;FS=5.867;HRun=1;HaplotypeScore=67.8579;InbreedingCoeff=0.9110;MQ=40.98;MQ0=22;MQRankSum=-3.990;QD=10.72;ReadPosRankSum=0.046;VQSLOD=1.3580;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:22:51.11:0,51,600	0/0:3,0:3:5.98:0,6,59	./.	./.	0/0:24,0:23:30.02:0,30,328	0/0:14,0:10:15.04:0,15,180	0/0:12,0:9:20.77:0,21,154	0/0:20,0:18:50.96:0,51,549	0/0:11,0:10:17.93:0,18,185	1/1:12,0:10:26.76:196,27,0	1/1:11,0:9:20.65:143,21,0	0/0:11,0:10:27.07:0,27,324	0/0:9,0:9:23.59:0,24,285	1/1:9,0:9:20.46:127,20,0	1/1:13,1:11:23.16:167,23,0	1/1:12,0:12:26.51:181,27,0	0/0:16,0:12:18.04:0,18,210	0/0:19,0:16:24.02:0,24,264	1/1:18,0:16:8.34:258,8,0	1/1:12,0:7:11.48:74,11,0	1/1:10,0:8:14.94:119,15,0	0/0:8,0:7:12.04:0,12,154	0/0:17,0:16:40.87:0,41,449	0/0:8,0:5:9.02:0,9,103	1/1:11,0:10:17.19:101,17,0	1/1:14,0:14:37.47:241,37,0	1/1:3,7:10:10.15:72,10,0	1/1:5,0:3:2.22:7,2,0
chr10	59598926	.	TA	T	2191.21	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=9.820;DP=564;FS=1.901;HRun=10;HaplotypeScore=55.3443;InbreedingCoeff=0.9877;MQ=70.63;MQ0=0;MQRankSum=0.610;QD=16.86;ReadPosRankSum=2.192;VQSLOD=4.2539;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,117,1251	0/0:13,0:13:36.10:0,36,398	0/0:15,0:14:11.65:0,12,237	0/0:7,0:7:15.51:0,16,164	0/0:30,0:30:65.99:0,66,678	1/1:1,25:26:68.99:599,69,0	1/1:5,14:19:32.98:286,33,0	0/0:34,0:35:83.28:0,83,956	0/0:16,0:16:48.11:0,48,521	0/0:22,0:22:51.13:0,51,558	0/0:17,1:18:19.08:0,19,439	1/1:2,17:19:44.96:391,45,0	1/1:1,19:20:17.53:314,18,0	0/0:20,0:20:42.08:0,42,445	0/0:28,0:28:75.12:0,75,805	0/0:16,0:16:42.11:0,42,465	0/0:29,0:29:73.84:0,74,759	0/0:15,0:15:36.08:0,36,388	0/0:15,0:15:36.08:0,36,389	0/0:16,0:16:39.11:0,39,431	0/0:12,0:12:24.06:0,24,266	1/1:4,13:17:26.95:227,27,0	1/1:1,14:15:35.99:312,36,0	1/1:1,13:14:29.55:260,30,0	0/0:27,0:27:78.20:0,78,856	0/0:20,0:20:54.14:0,54,590	0/0:23,0:23:57.12:0,57,608	0/0:14,0:14:39.05:0,39,394
chr10	59599148	.	A	ATT	3689.97	PASS	AB=0.724;AC=30;AF=0.536;AN=56;BaseQRankSum=4.791;DP=508;FS=1.758;HRun=12;HaplotypeScore=73.7053;InbreedingCoeff=0.6972;MQ=71.49;MQ0=2;MQRankSum=-0.114;QD=11.15;ReadPosRankSum=0.178;VQSLOD=2.1545;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,21:34:69.01:938,69,0	0/0:8,0:8:21.01:0,21,194	0/0:15,0:11:11.91:0,12,110	0/1:15,0:9:5.41:5,0,69	1/1:6,14:24:54.43:630,54,0	0/0:15,0:16:44.76:0,45,396	0/0:22,0:23:50.89:0,51,513	0/0:25,0:26:62.71:0,63,563	1/1:4,16:20:42.14:589,42,0	1/1:3,0:18:9.78:93,10,0	1/1:4,0:18:25.60:107,26,0	0/0:9,0:9:20.98:0,21,189	0/0:14,0:14:30.87:0,31,279	0/1:3,0:14:9.91:34,0,10	1/1:7,0:27:22.96:106,23,0	1/1:6,0:23:12.54:102,13,0	0/0:20,0:20:44.96:0,45,405	1/1:1,10:11:27.09:379,27,0	0/1:10,0:20:22.88:58,0,23	1/1:4,0:17:3.74:93,4,0	0/1:9,1:17:54.67:55,0,61	0/0:15,0:15:41.87:0,42,375	0/0:12,0:12:27:0,27,244	0/0:17,0:18:35.86:0,36,380	1/1:3,0:15:24.95:86,25,0	1/1:6,1:27:24.51:214,25,0	1/1:2,1:18:27.51:125,28,0	1/1:0,0:12:22.33:77,22,0
chr10	59600000	.	A	AC	8270.02	PASS	AB=0.700;AC=53;AF=0.981;AN=54;BaseQRankSum=-2.247;DP=212;FS=31.695;HRun=0;HaplotypeScore=55.9001;InbreedingCoeff=-0.0337;MQ=55.09;MQ0=0;MQRankSum=-2.973;QD=39.76;ReadPosRankSum=1.995;VQSLOD=2.7591;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,7:6:15.05:239,15,0	1/1:1,4:5:8.94:112,9,0	0/1:4,3:3:60.79:78,0,61	./.	1/1:1,7:8:20.96:303,21,0	1/1:2,8:10:26.99:376,27,0	1/1:0,12:12:33.11:526,33,0	1/1:3,15:15:42.09:612,42,0	1/1:0,6:6:18.06:287,18,0	1/1:1,9:10:24.08:383,24,0	1/1:0,5:5:12.04:191,12,0	1/1:0,8:8:21.07:335,21,0	1/1:0,4:4:12.04:191,12,0	1/1:0,7:7:21.07:335,21,0	1/1:0,7:7:21.07:334,21,0	1/1:0,4:4:12.04:191,12,0	1/1:0,11:11:33.11:526,33,0	1/1:1,5:6:14.75:235,15,0	1/1:1,6:6:18.06:286,18,0	1/1:1,5:6:18.05:264,18,0	1/1:0,4:4:9.03:144,9,0	1/1:0,5:5:12.04:191,12,0	1/1:0,8:8:21.07:334,21,0	1/1:0,6:6:14.94:207,15,0	1/1:1,11:12:36.04:543,36,0	1/1:1,11:12:33.11:527,33,0	1/1:2,7:9:27:375,27,0	1/1:1,3:4:9.03:144,9,0
chr10	59600606	.	G	GGC	1026.13	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-5.041;DP=453;FS=11.939;HRun=0;HaplotypeScore=77.4643;InbreedingCoeff=0.8296;MQ=71.48;MQ0=4;MQRankSum=1.950;QD=8.62;ReadPosRankSum=5.493;VQSLOD=2.1786;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:44.75:0,45,375	0/0:1,0:1:2.98:0,3,22	0/0:43,0:15:26.45:0,26,172	0/0:42,0:16:22.58:0,23,161	0/0:5,0:5:12.02:0,12,132	1/1:4,0:16:6.06:63,6,0	1/1:3,0:16:6.02:98,6,0	0/0:4,0:4:8.93:0,9,66	0/0:12,0:12:32.18:0,32,282	0/0:3,0:6:14.82:0,15,103	0/0:9,0:9:22.40:0,22,153	1/1:6,5:14:18:214,18,0	1/1:3,15:18:10.90:166,11,0	0/0:14,0:13:15.21:0,15,98	0/0:12,0:13:14.87:0,15,109	0/0:16,0:18:50.55:0,51,379	0/0:16,0:16:25.94:0,26,279	0/0:18,0:18:53.84:0,54,484	0/0:17,0:18:25.32:0,25,196	0/0:10,0:11:5.91:0,6,38	0/0:22,0:22:11.62:0,12,72	1/1:5,8:13:9.01:119,9,0	1/1:4,5:11:14.71:146,15,0	1/1:6,23:31:25.77:400,26,0	0/0:8,0:7:3.47:0,3,27	0/0:13,0:13:23.58:0,24,158	0/0:25,0:25:60.90:0,61,455	0/0:7,0:11:32.52:0,33,230
chr10	59600607	.	GGT	G	2682.08	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=-4.744;DP=454;FS=6.769;HRun=0;HaplotypeScore=62.1418;InbreedingCoeff=0.8397;MQ=71.56;MQ0=4;MQRankSum=-0.560;QD=13.97;ReadPosRankSum=-0.555;VQSLOD=2.4979;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:65.71:0,66,582	1/1:1,0:1:2.98:22,3,0	0/0:43,0:15:29.20:0,29,204	0/0:40,0:15:28.25:0,28,218	0/0:5,0:5:14.87:0,15,174	0/0:16,0:16:27.09:0,27,362	0/0:15,0:15:30.10:0,30,434	1/1:6,0:6:14.78:109,15,0	0/0:15,0:15:32.96:0,33,345	1/1:5,1:6:14.90:123,15,0	1/1:9,1:10:26.95:227,27,0	0/0:14,0:14:26.97:0,27,257	0/0:17,0:18:14.73:0,15,141	1/1:1,13:13:14.83:143,15,0	1/1:1,11:12:14.95:158,15,0	1/1:10,7:17:50.90:490,51,0	0/1:16,0:16:48.96:49,0,114	0/0:18,0:18:50.80:0,51,566	1/1:4,13:17:38.48:342,38,0	1/1:1,10:11:5.85:34,6,0	1/1:2,20:22:8.90:102,9,0	0/0:13,0:13:29.61:0,30,241	0/0:10,0:10:18.01:0,18,196	0/0:30,0:30:36.08:0,36,408	1/1:0,8:7:2.26:22,2,0	1/1:2,12:13:29.85:251,30,0	1/1:14,13:25:59.01:534,59,0	1/1:7,4:11:32.88:295,33,0
chr10	59600823	.	C	CA	3958.72	PASS	AB=0.741;AC=41;AF=0.732;AN=56;BaseQRankSum=-4.042;DP=586;FS=3.644;HRun=13;HaplotypeScore=65.7219;InbreedingCoeff=0.2098;MQ=60.48;MQ0=9;MQRankSum=-1.102;QD=8.37;ReadPosRankSum=0.982;VQSLOD=2.7999;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,10:23:26.57:391,27,0	0/1:7,0:9:2.36:2,0,85	0/0:71,0:23:19.72:0,20,109	0/1:52,0:17:15.23:15,0,46	1/1:4,17:21:29.54:336,30,0	1/1:7,11:18:18.02:167,18,0	1/1:1,10:12:20.92:182,21,0	0/0:24,0:24:33.83:0,34,241	1/1:4,17:21:19.84:172,20,0	0/1:17,5:22:14.57:142,0,15	1/1:5,7:12:8.13:97,8,0	0/1:8,8:16:13.12:22,0,13	1/1:8,18:27:19.07:294,19,0	1/1:7,12:18:9.01:84,9,0	1/1:5,14:18:1.86:140,2,0	1/1:10,14:24:27.03:251,27,0	0/0:15,0:17:37.53:0,38,231	0/1:5,15:20:5.63:87,0,6	1/1:11,5:15:4.05:137,4,0	1/1:9,11:22:29.70:249,30,0	0/1:6,10:17:2.09:122,0,2	1/1:5,2:8:12.74:100,13,0	0/1:8,12:20:21.52:94,0,22	1/1:1,13:14:15.02:139,15,0	0/1:4,8:12:36:91,0,36	1/1:8,17:24:37.59:338,38,0	1/1:10,7:16:32.92:285,33,0	0/1:3,1:4:14.58:22,0,15
chr10	59601000	.	C	CATACATATACAAATG	20092.35	PASS	AB=1.000;AC=44;AF=0.786;AN=56;BaseQRankSum=9.494;DP=459;FS=2.321;HRun=0;HaplotypeScore=180.0758;InbreedingCoeff=0.4579;MQ=58.93;MQ0=0;MQRankSum=-10.389;QD=53.30;ReadPosRankSum=4.342;VQSLOD=4.4564;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,0:6:8.06:384,8,0	0/0:6,0:6:18.06:0,18,752	0/0:13,0:13:21.11:0,21,978	0/1:13,0:13:20:20,0,975	0/1:22,0:22:27.71:550,0,28	1/1:16,0:16:12.04:683,12,0	1/1:18,0:18:6.02:133,6,0	0/0:41,0:41:99:0,102,3795	1/1:13,0:13:6.02:236,6,0	1/1:24,0:24:54.97:2306,55,0	1/1:15,0:15:5.45:195,5,0	1/1:11,0:11:2.62:636,3,0	0/1:26,0:26:0.99:912,0,1	1/1:16,0:16:33.11:1841,33,0	0/1:9,0:8:13.76:367,0,14	1/1:18,0:18:21.07:1326,21,0	0/0:22,0:22:40.26:0,40,2247	1/1:7,0:7:21.03:688,21,0	1/1:5,5:17:45.13:1505,45,0	1/1:20,0:20:7.07:696,7,0	1/1:8,0:8:3.01:81,3,0	1/1:22,0:22:29.04:2036,29,0	1/1:20,0:20:13.12:639,13,0	1/1:6,0:6:5.38:76,5,0	1/1:19,0:18:21.07:1218,21,0	1/1:15,0:14:36.12:1670,36,0	1/1:26,0:25:18.06:1135,18,0	1/1:8,0:8:12.04:758,12,0
chr10	59601001	.	A	ATACATATACAAATGAATACATGTTT	73103.02	PASS	AB=1.000;AC=47;AF=0.839;AN=56;BaseQRankSum=-0.522;DP=648;FS=19.558;HRun=0;HaplotypeScore=257.8759;InbreedingCoeff=0.8230;MQ=52.80;MQ0=0;MQRankSum=-12.966;QD=129.39;ReadPosRankSum=1.761;VQSLOD=2.9243;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,3:18:39.13:2854,39,0	0/0:6,0:6:18.06:0,18,1085	0/0:13,0:13:21.11:0,21,1071	0/1:14,0:13:10.56:11,0,1320	1/1:11,9:32:48.16:3024,48,0	1/1:13,4:28:48.16:4025,48,0	1/1:12,1:28:36.12:2139,36,0	0/0:42,0:42:99:0,102,5121	1/1:8,1:23:24.08:1776,24,0	1/1:12,5:36:84.84:7338,85,0	1/1:12,3:28:45.11:2361,45,0	1/1:8,5:20:39.13:3305,39,0	1/1:12,8:36:57.20:3930,57,0	1/1:11,8:24:54.14:4441,54,0	1/1:16,5:25:54.19:3806,54,0	1/1:8,7:25:39.13:3911,39,0	0/0:22,0:22:40.26:0,40,3161	1/1:10,0:10:27.05:1479,27,0	1/1:12,1:12:33.11:2477,33,0	1/1:7,6:29:45.15:2781,45,0	1/1:1,1:10:3.01:257,3,0	1/1:7,13:26:57.19:4733,57,0	1/1:9,4:28:38.80:2467,39,0	1/1:2,1:8:9.03:333,9,0	1/1:8,7:26:36.12:3180,36,0	1/1:11,5:24:66.23:5322,66,0	1/1:13,8:38:57.20:4647,57,0	1/1:7,4:12:24.08:2506,24,0
chr10	59603494	.	G	GT	5823.29	PASS	AB=0.951;AC=25;AF=0.446;AN=56;BaseQRankSum=-2.824;DP=577;FS=21.165;HRun=9;HaplotypeScore=134.6987;InbreedingCoeff=0.9001;MQ=74.43;MQ0=3;MQRankSum=-0.306;QD=20.22;ReadPosRankSum=0.955;VQSLOD=3.5679;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:41.96:0,42,359	0/0:13,0:13:35.91:0,36,308	0/1:36,2:23:22.51:23,0,206	0/0:41,0:26:15.05:0,15,227	0/0:28,0:28:74.87:0,75,635	0/0:17,0:17:38.93:0,39,338	0/0:19,0:19:53.91:0,54,459	0/0:21,0:21:38.88:0,39,332	0/0:18,0:19:55.99:0,56,468	1/1:9,18:27:57.15:627,57,0	1/1:1,24:25:46.16:737,46,0	0/0:11,0:11:29.97:0,30,260	0/0:17,0:17:41.93:0,42,361	1/1:3,9:12:27.07:299,27,0	1/1:4,18:22:25.09:505,25,0	1/1:4,20:24:48.13:531,48,0	0/0:22,0:22:50.97:0,51,439	0/0:13,0:12:32.98:0,33,282	1/1:4,9:13:21.06:232,21,0	1/1:7,26:33:78.16:844,78,0	1/1:0,1:1:3.01:33,3,0	0/0:20,0:20:53.96:0,54,468	0/0:22,0:22:53.94:0,54,467	0/0:9,0:9:26.95:0,27,227	1/1:5,12:17:30.08:332,30,0	1/1:4,17:21:48.07:509,48,0	1/1:8,30:38:81.52:878,82,0	1/1:8,8:16:26.44:274,26,0
chr10	59605230	.	C	CACACACACAA	10752.29	PASS	AB=1.000;AC=45;AF=0.804;AN=56;BaseQRankSum=0.153;DP=611;FS=4.133;HRun=0;HaplotypeScore=163.4108;InbreedingCoeff=0.7684;MQ=55.92;MQ0=17;MQRankSum=-2.148;QD=23.07;ReadPosRankSum=0.898;VQSLOD=4.3415;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:27:10.74:112,11,0	0/0:7,0:7:12:0,12,233	0/0:45,0:14:23.77:0,24,191	0/0:40,0:13:17.68:0,18,143	1/1:33,0:33:53.54:673,54,0	1/1:9,18:29:18.42:1184,18,0	1/1:19,1:19:17.97:440,18,0	0/0:26,0:26:1:0,1,718	1/1:16,0:17:18.06:338,18,0	1/1:24,0:24:63.56:939,64,0	1/1:14,0:13:23.46:256,23,0	1/1:10,7:17:17.79:529,18,0	1/1:5,13:18:18.55:807,19,0	0/1:16,0:16:10.47:431,0,10	1/1:23,0:23:27.09:536,27,0	1/1:18,0:16:14.50:562,15,0	0/0:27,0:26:40.40:0,40,1505	1/1:11,0:11:18.46:287,18,0	1/1:9,0:9:20.77:197,21,0	1/1:21,0:20:31.85:389,32,0	1/1:21,0:20:0.47:1,0,0	1/1:23,1:23:38.59:289,39,0	1/1:8,15:23:14.78:288,15,0	1/1:17,0:18:17.57:267,18,0	1/1:25,0:25:24.03:431,24,0	1/1:26,0:26:77.06:1030,77,0	1/1:22,0:22:33.06:595,33,0	1/1:9,0:9:8.98:171,9,0
chr10	59605232	.	C	CACACACAA	10813.29	PASS	AB=0.884;AC=39;AF=0.696;AN=56;BaseQRankSum=0.028;DP=624;FS=5.311;HRun=0;HaplotypeScore=152.2969;InbreedingCoeff=0.3743;MQ=55.69;MQ0=20;MQRankSum=0.098;QD=22.76;ReadPosRankSum=5.089;VQSLOD=3.4217;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:27:14.38:191,14,0	0/0:8,0:8:11.97:0,12,206	0/0:45,0:14:23.77:0,24,191	0/0:42,0:12:17.49:0,17,142	1/1:33,0:33:56.53:754,57,0	0/1:30,1:30:48.23:847,0,48	0/1:10,11:21:31.64:327,0,32	0/0:27,0:27:43.10:0,43,777	1/1:16,0:16:18.04:422,18,0	1/1:24,0:24:66.53:1017,67,0	1/1:15,0:14:24.26:283,24,0	0/1:17,0:17:8.61:379,0,9	0/1:19,0:19:14.64:519,0,15	1/1:16,0:16:0.46:534,0,0	1/1:23,0:23:27.09:631,27,0	1/1:20,0:18:27.33:692,27,0	0/0:27,0:26:43.29:0,43,1260	1/1:11,0:11:19.57:332,20,0	1/1:8,0:8:18.45:199,18,0	1/1:21,0:20:31.91:410,32,0	1/1:21,0:20:0.47:1,0,0	0/1:9,15:24:7.24:182,0,7	0/1:24,1:25:24.93:250,0,25	0/1:19,0:19:3.86:164,0,4	1/1:24,0:24:24.08:530,24,0	1/1:27,0:27:80.07:1187,80,0	1/1:22,0:22:33.11:738,33,0	1/1:8,1:9:3.69:225,4,0
chr10	59605236	.	C	CACAA	7976.41	PASS	AB=0.969;AC=30;AF=0.536;AN=56;BaseQRankSum=2.199;DP=650;FS=3.052;HRun=0;HaplotypeScore=120.8979;InbreedingCoeff=-0.1420;MQ=54.19;MQ0=20;MQRankSum=0.708;QD=16.11;ReadPosRankSum=7.063;VQSLOD=4.0614;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:28:33.95:133,0,34	0/0:8,0:8:14.97:0,15,181	0/0:45,0:14:26.38:0,26,208	0/0:43,0:12:17.72:0,18,143	0/1:33,0:33:22.47:669,0,22	0/1:31,0:30:52.07:415,0,52	0/1:24,0:23:99:108,0,104	0/0:31,0:31:84.77:0,85,844	1/1:16,0:16:18.06:349,18,0	1/1:26,0:26:48.28:840,48,0	0/1:17,0:17:3.74:262,0,4	0/1:15,0:15:39.40:100,0,39	0/1:21,0:21:45.89:204,0,46	1/1:20,0:20:12.09:471,12,0	0/1:23,0:23:15.32:485,0,15	1/1:23,0:21:5.48:564,5,0	0/0:28,0:27:64.53:0,65,918	0/1:12,0:12:10.57:291,0,11	1/1:9,0:9:1.28:166,1,0	0/1:22,0:21:38.82:304,0,39	0/1:19,0:19:7.24:7,0,38	0/1:25,0:24:35.32:141,0,35	0/1:23,0:23:43.08:43,0,151	0/1:19,0:19:5.03:120,0,5	1/1:21,0:21:9.71:470,10,0	1/1:28,0:28:66.09:1035,66,0	0/1:26,1:27:7.90:624,0,8	0/1:5,6:11:36.43:179,0,36
chr10	59605238	.	C	CAA	4829.69	PASS	AB=0.990;AC=28;AF=0.500;AN=56;BaseQRankSum=5.949;DP=645;FS=0.398;HRun=1;HaplotypeScore=119.6138;InbreedingCoeff=-0.1659;MQ=51.82;MQ0=20;MQRankSum=-0.706;QD=10.21;ReadPosRankSum=7.512;VQSLOD=1.3065;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:27,1:28:54.16:59,0,54	0/0:7,0:7:14.97:0,15,159	0/0:43,0:12:29.39:0,29,251	0/0:43,0:12:14.93:0,15,151	0/1:32,0:32:67.87:424,0,68	0/1:32,0:32:88.33:177,0,88	0/1:24,0:23:52.68:53,0,127	0/0:31,0:31:87.79:0,88,830	0/1:14,0:14:1.89:171,0,2	1/1:26,0:26:19.80:564,20,0	0/1:18,0:17:33.48:169,0,33	0/1:14,0:14:39.26:47,0,39	0/1:21,0:21:45.66:99,0,46	1/1:18,1:19:5.12:297,5,0	0/1:23,0:23:18.98:307,0,19	1/1:22,1:21:13.70:356,14,0	0/0:28,0:27:60.38:0,60,749	0/1:12,0:12:10.02:181,0,10	1/1:9,0:9:0.36:138,0,0	0/1:22,1:22:99:262,0,118	0/0:20,0:19:11.63:0,12,92	0/1:25,0:24:18.83:145,0,19	0/1:21,1:22:14.99:15,0,139	0/1:19,0:19:10.57:72,0,11	1/1:21,0:21:14.85:272,15,0	1/1:27,1:28:17.56:635,18,0	0/1:26,1:27:93.20:307,0,93	0/1:12,0:12:45.10:80,0,45
chr10	59606736	.	G	GA	3475.01	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-10.999;DP=670;FS=0.437;HRun=1;HaplotypeScore=58.8125;InbreedingCoeff=0.9998;MQ=84.78;MQ0=0;MQRankSum=-2.759;QD=39.05;ReadPosRankSum=2.173;VQSLOD=4.2400;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,16:16:39.13:584,39,0	0/0:11,0:11:33.11:0,33,426	0/0:23,0:23:66.20:0,66,826	0/0:18,0:18:35.33:0,35,492	1/1:1,42:43:99:1663,111,0	0/0:37,0:37:99:0,105,1321	0/0:12,0:12:36.10:0,36,452	0/0:37,0:37:99:0,108,1391	1/1:0,15:15:42.14:629,42,0	0/0:25,0:26:78.24:0,78,996	0/0:27,0:27:81.26:0,81,1051	0/0:18,0:18:54.16:0,54,686	0/0:25,0:25:75.24:0,75,972	0/0:21,0:21:60.19:0,60,778	0/0:34,0:34:99:0,102,1324	0/0:26,0:26:78.23:0,78,984	0/0:25,0:25:69.20:0,69,880	1/1:0,15:15:42.10:598,42,0	0/0:26,0:26:78.24:0,78,1000	0/0:34,0:34:90.27:0,90,1140	0/0:16,0:15:48.12:0,48,605	0/0:25,0:25:72.23:0,72,935	0/0:13,0:13:39.13:0,39,506	0/0:31,0:31:93.29:0,93,1191	0/0:20,0:20:51.17:0,51,662	0/0:26,0:26:78.25:0,78,1000	0/0:35,0:35:99:0,99,1257	0/0:15,0:15:45.12:0,45,567
chr10	59608405	.	CT	C	15604.27	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=11.391;DP=555;FS=0.826;HRun=2;HaplotypeScore=92.7613;InbreedingCoeff=0.9988;MQ=84.99;MQ0=1;MQRankSum=-5.618;QD=35.30;ReadPosRankSum=7.196;VQSLOD=4.3681;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,26:26:75.24:973,75,0	0/0:10,0:10:30.09:0,30,431	0/0:20,0:20:57.10:0,57,721	0/0:23,0:23:59.46:0,59,839	1/1:0,19:19:51.16:655,51,0	1/1:1,20:21:48.16:623,48,0	1/1:1,19:20:51.17:662,51,0	0/0:42,0:42:99:0,123,1821	1/1:0,15:15:45.15:584,45,0	1/1:0,29:29:87.24:1074,87,0	1/1:0,19:19:57.19:740,57,0	1/1:1,20:21:51.17:661,51,0	1/1:0,19:19:54.18:701,54,0	1/1:1,15:16:39.13:506,39,0	1/1:0,25:25:69.22:895,69,0	1/1:0,18:18:48.16:620,48,0	0/0:18,0:18:54.18:0,54,808	1/1:1,9:9:24.08:311,24,0	1/1:0,13:13:39.13:506,39,0	1/1:0,11:11:33.11:428,33,0	1/1:0,28:28:75.24:973,75,0	1/1:0,22:22:60.20:779,60,0	1/1:0,14:14:39.13:506,39,0	1/1:0,15:15:45.15:584,45,0	1/1:0,21:21:48.16:623,48,0	1/1:1,21:22:63.19:802,63,0	1/1:1,29:30:84.27:1087,84,0	1/1:0,8:8:24.08:311,24,0
chr10	59608718	.	AAAAT	A	1559.01	PASS	AB=0.667;AC=31;AF=0.738;AN=42;BaseQRankSum=2.879;DP=229;FS=1.393;HRun=0;HaplotypeScore=38.7010;InbreedingCoeff=0.3955;MQ=58.26;MQ0=3;MQRankSum=0.343;QD=9.51;ReadPosRankSum=0.370;VQSLOD=2.0653;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:6,6:12:19.79:170,0,20	1/1:7,0:7:3:28,3,0	./.	./.	1/1:8,0:8:3.01:46,3,0	0/0:8,0:8:12.04:0,12,261	0/0:6,0:6:3.01:0,3,52	1/1:34,0:33:2.88:15,3,0	./.	1/1:8,1:9:3.01:46,3,0	1/1:8,2:10:9.03:139,9,0	./.	0/0:3,0:3:3.01:0,3,70	1/1:2,2:4:6.02:93,6,0	./.	1/1:3,2:5:3.01:46,3,0	1/1:12,0:13:9.02:108,9,0	1/1:6,5:11:15.05:232,15,0	1/1:13,3:16:9.02:119,9,0	./.	1/1:2,2:4:6.02:93,6,0	0/0:4,0:4:3.01:0,3,57	./.	0/0:3,0:3:3.01:0,3,70	1/1:5,2:7:6.02:93,6,0	1/1:3,2:5:6.02:93,6,0	1/1:5,4:9:12.04:185,12,0	1/1:4,6:10:12.04:185,12,0
chr10	59609237	.	C	CTT	6906.05	PASS	AB=0.619;AC=48;AF=0.857;AN=56;BaseQRankSum=-5.523;DP=509;FS=0.000;HRun=12;HaplotypeScore=75.0261;InbreedingCoeff=0.3686;MQ=79.01;MQ0=6;MQRankSum=-2.365;QD=15.45;ReadPosRankSum=2.008;VQSLOD=3.7238;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,0:21:12.02:116,12,0	0/1:6,0:12:12.67:13,0,89	0/0:34,0:22:25.71:0,26,275	0/0:26,0:19:24.93:0,25,157	1/1:9,1:27:30.95:351,31,0	1/1:5,0:17:30.05:291,30,0	1/1:2,1:15:20.71:183,21,0	0/1:13,0:29:50.54:85,0,51	1/1:6,0:9:7.83:70,8,0	1/1:2,16:21:59.09:700,59,0	1/1:3,13:19:22.60:491,23,0	1/1:5,0:14:21.04:206,21,0	1/1:6,0:6:6.01:62,6,0	0/1:3,6:13:8.80:148,0,9	1/1:3,11:14:12.04:161,12,0	1/1:4,12:16:24.08:337,24,0	1/1:2,1:26:37.27:159,37,0	1/1:14,0:14:2.94:53,3,0	1/1:9,18:26:57.13:711,57,0	1/1:4,8:14:32.59:411,33,0	1/1:2,4:8:11.53:135,12,0	1/1:2,0:7:12.03:125,12,0	1/1:8,0:16:18.02:170,18,0	0/1:6,1:18:6.71:174,0,7	1/1:3,14:20:32.42:386,32,0	1/1:10,14:25:39.53:484,40,0	1/1:3,22:28:31.91:709,32,0	1/1:2,4:6:14.54:176,15,0
chr10	59609677	.	CG	C	5999.09	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=15.124;DP=632;FS=4.703;HRun=1;HaplotypeScore=65.9168;InbreedingCoeff=0.9981;MQ=84.57;MQ0=0;MQRankSum=-4.344;QD=38.70;ReadPosRankSum=3.307;VQSLOD=5.6201;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,120,1912	0/0:10,0:10:30.10:0,30,479	0/0:26,0:26:78.27:0,78,1235	0/0:13,0:13:36.59:0,37,561	0/0:12,0:12:36.09:0,36,527	1/1:0,22:22:63.21:881,63,0	1/1:0,30:30:78.26:1091,78,0	0/0:29,0:29:87.29:0,87,1363	0/0:13,0:13:39.11:0,39,595	0/0:24,0:24:72.24:0,72,1130	0/0:6,0:6:18.06:0,18,287	1/1:0,30:30:84.28:1175,84,0	1/1:0,28:28:81.27:1133,81,0	0/0:21,0:21:63.21:0,63,1001	0/0:40,0:40:99:0,120,1913	0/0:20,0:20:60.20:0,60,956	0/0:43,0:43:99:0,126,1985	0/0:13,0:13:39.13:0,39,619	0/0:22,0:22:63.21:0,63,1006	0/0:23,0:23:66.21:0,66,1025	0/0:45,0:45:99:0,132,2021	1/1:0,12:12:33.11:462,33,0	1/1:0,10:10:30.10:420,30,0	1/1:0,23:23:60.20:838,60,0	0/0:10,0:10:30.08:0,30,454	0/0:32,0:32:96.33:0,96,1529	0/0:21,0:21:63.21:0,63,1006	0/0:13,0:13:39.13:0,39,623
chr10	59611350	.	ATAT	A	3688.45	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=11.182;DP=522;FS=24.817;HRun=0;HaplotypeScore=77.2605;InbreedingCoeff=0.9753;MQ=81.43;MQ0=0;MQRankSum=-3.024;QD=40.98;ReadPosRankSum=3.707;VQSLOD=2.3392;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,27:29:63.21:1034,63,0	0/0:4,0:4:12.04:0,12,271	0/0:16,0:16:41.15:0,41,820	0/0:16,0:16:45.11:0,45,832	1/1:0,25:25:65.85:1067,66,0	0/0:26,0:26:66.23:0,66,1496	0/0:12,0:12:36.12:0,36,816	0/0:41,0:41:99:0,120,2626	1/1:0,20:20:57.19:949,57,0	0/0:20,0:20:60.21:0,60,1361	0/0:18,0:18:54.19:0,54,1224	0/0:19,0:19:51.17:0,51,1156	0/0:12,0:12:36.12:0,36,797	0/0:21,0:21:60.21:0,60,1332	0/0:28,0:28:78.27:0,78,1740	0/0:20,0:20:57.20:0,57,1248	0/0:15,0:15:42.14:0,42,946	1/1:0,16:16:39.13:637,39,0	0/0:12,0:12:30.10:0,30,678	0/0:15,0:15:45.15:0,45,1002	0/0:21,0:21:60.21:0,60,1336	0/0:12,0:12:36.12:0,36,815	0/0:15,0:15:45.15:0,45,1013	0/0:16,0:16:45.15:0,45,991	0/0:14,0:14:42.14:0,42,952	0/0:34,0:34:99:0,102,2192	0/0:22,0:22:63.18:0,63,1380	0/0:3,0:3:9.03:0,9,204
chr10	59611828	.	ATGG	A	243.81	PASS	AB=0.828;AC=2;AF=0.036;AN=56;BaseQRankSum=5.661;DP=652;FS=7.171;HRun=0;HaplotypeScore=150.0317;InbreedingCoeff=-0.0424;MQ=55.75;MQ0=9;MQRankSum=-5.447;QD=7.86;ReadPosRankSum=-0.579;VQSLOD=2.7102;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,100,2245	0/0:10,0:10:30.10:0,30,711	0/0:23,1:12:4.32:0,4,336	0/0:24,0:16:47.95:0,48,1016	0/0:22,0:22:63.22:0,63,1501	0/0:23,0:23:66.18:0,66,1358	0/0:32,0:32:85.54:0,86,2024	0/0:26,0:24:72.25:0,72,1639	0/0:23,0:24:49.92:0,50,1365	0/0:21,0:21:57.18:0,57,1323	0/0:15,0:15:23.17:0,23,970	0/0:22,0:21:60.16:0,60,1383	0/0:27,0:27:75.24:0,75,1697	0/0:37,0:37:99:0,108,2499	0/1:9,10:19:99:233,0,425	0/0:21,0:21:63.22:0,63,1470	0/0:30,1:31:47.93:0,48,1941	0/0:22,0:22:63.07:0,63,1386	0/0:15,0:13:39.13:0,39,869	0/0:14,0:14:42.14:0,42,1003	0/0:40,0:39:99:0,111,2510	0/0:17,0:17:48.16:0,48,1152	0/0:21,0:21:57.14:0,57,1215	0/0:25,0:25:63.22:0,63,1456	0/0:17,0:17:51.17:0,51,1136	0/0:25,0:25:75.25:0,75,1781	0/0:28,0:28:81.21:0,81,1778	0/1:12,0:12:99:99,0,509
chr10	59611979	.	A	AGAGGAGGAG	2025.45	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=3.152;DP=654;FS=6.660;HRun=0;HaplotypeScore=177.9996;InbreedingCoeff=0.8805;MQ=57.89;MQ0=6;MQRankSum=-6.285;QD=13.50;ReadPosRankSum=-1.341;VQSLOD=1.9854;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:62.39:0,62,1410	0/0:6,0:5:8.98:0,9,240	0/0:27,0:9:10.41:0,10,137	0/0:28,0:14:18.54:0,19,234	0/0:23,0:23:51.09:0,51,1129	1/1:12,0:12:6.02:244,6,0	1/1:25,0:25:35.89:486,36,0	0/0:25,0:24:45.11:0,45,851	0/0:24,0:24:38.13:0,38,1353	0/0:25,0:24:48.73:0,49,1027	0/0:15,0:15:36.07:0,36,889	1/1:6,9:21:6.02:172,6,0	1/1:33,0:33:14.73:563,15,0	0/0:24,0:24:57.18:0,57,1551	0/0:30,0:30:62.79:0,63,1516	0/0:29,0:29:66.19:0,66,1569	0/0:27,0:27:61.44:0,61,1473	0/0:18,0:18:45.07:0,45,992	0/0:16,0:16:38.28:0,38,775	0/0:25,0:24:40.85:0,41,1382	0/0:51,0:50:96.28:0,96,2312	1/1:15,0:15:12.04:391,12,0	1/1:22,0:21:8.58:332,9,0	1/1:22,0:22:2.84:14,3,0	0/0:27,0:27:54.18:0,54,1395	0/0:18,0:19:13.55:0,14,1122	0/0:22,0:21:60.18:0,60,1483	0/0:11,0:11:19.47:0,19,578
chr10	59611985	.	G	GGAGGAGGAA	2831.23	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=0.776;DP=687;FS=1.223;HRun=0;HaplotypeScore=180.4528;InbreedingCoeff=0.8743;MQ=59.77;MQ0=7;MQRankSum=-4.679;QD=17.06;ReadPosRankSum=-3.038;VQSLOD=2.1168;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:32:71.66:0,72,1584	0/0:6,0:5:9.95:0,10,249	0/0:33,0:12:0.41:0,0,203	0/0:35,0:17:26.25:0,26,372	0/0:21,0:21:54.09:0,54,1210	1/1:3,9:14:9:304,9,0	1/1:26,0:26:42.09:786,42,0	0/0:26,0:25:54.14:0,54,1106	0/0:25,0:25:68.63:0,69,1493	0/0:26,0:25:59.96:0,60,1276	0/0:13,0:13:36.12:0,36,959	1/1:22,1:23:14.98:272,15,0	1/1:4,26:34:14.93:661,15,0	0/0:27,0:26:63.16:0,63,1661	0/0:29,0:29:69.15:0,69,1646	0/0:31,0:31:69.18:0,69,1682	0/0:27,0:27:66.17:0,66,1578	0/0:19,0:19:48.15:0,48,1139	0/0:16,0:16:42.08:0,42,948	0/0:26,0:25:61.84:0,62,1507	0/0:50,0:49:98.03:0,98,2397	1/1:4,12:16:23.84:540,24,0	1/1:2,22:27:10.71:407,11,0	1/1:4,20:25:5.91:47,6,0	0/0:26,0:26:57.15:0,57,1479	0/0:22,0:22:42.35:0,42,1289	0/0:20,0:19:60.19:0,60,1571	0/0:11,0:11:3.39:0,3,602
chr10	59612060	.	A	AGAG	15526.41	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-14.606;DP=737;FS=4.560;HRun=0;HaplotypeScore=114.6701;InbreedingCoeff=0.9967;MQ=66.71;MQ0=4;MQRankSum=1.143;QD=39.51;ReadPosRankSum=2.034;VQSLOD=5.7209;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:66.14:0,66,928	1/1:1,8:9:24.08:489,24,0	0/0:34,0:16:18.45:0,18,185	0/0:41,0:29:16.28:0,16,407	0/0:22,0:22:54.18:0,54,793	0/0:26,0:26:63.21:0,63,927	0/0:19,0:19:45.13:0,45,642	1/1:9,20:31:59.71:943,60,0	0/0:20,0:20:57.13:0,57,815	1/1:4,20:24:63.18:1162,63,0	1/1:4,24:28:63.21:1252,63,0	0/0:31,0:31:75.25:0,75,1101	0/0:37,0:37:84.26:0,84,1198	1/1:3,26:30:72.25:1489,72,0	1/1:7,24:31:55.67:1178,56,0	1/1:3,29:32:69.24:1429,69,0	1/1:5,23:29:49.98:1000,50,0	0/0:15,0:15:30.10:0,30,438	1/1:8,13:21:39.13:718,39,0	1/1:4,17:21:48.16:971,48,0	1/1:9,26:35:42.82:887,43,0	0/0:18,0:18:42.12:0,42,583	0/0:20,0:20:39.02:0,39,574	0/0:28,0:28:60.19:0,60,863	1/1:5,21:26:42.14:871,42,0	1/1:2,25:27:72.19:1414,72,0	1/1:3,20:26:60.21:1242,60,0	1/1:5,15:20:24.08:482,24,0
chr10	59612693	.	AGAAAAG	A	7053.68	PASS	AB=1.000;AC=49;AF=0.875;AN=56;BaseQRankSum=-7.577;DP=479;FS=0.000;HRun=0;HaplotypeScore=80.9511;InbreedingCoeff=0.5291;MQ=52.01;MQ0=39;MQRankSum=-0.287;QD=17.08;ReadPosRankSum=-2.644;VQSLOD=3.5349;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:20:46.78:645,47,0	0/1:11,0:11:6.73:7,0,250	0/0:30,0:8:18.75:0,19,157	0/1:52,0:15:4.22:4,0,278	1/1:25,0:25:55.24:798,55,0	1/1:11,0:10:28.97:355,29,0	1/1:13,0:13:28.13:273,28,0	0/0:35,0:34:76.48:0,76,1197	1/1:12,0:12:24.04:362,24,0	1/1:19,0:17:28.30:489,28,0	1/1:17,0:16:25.08:287,25,0	1/1:12,0:11:26.83:319,27,0	1/1:7,0:6:14.88:165,15,0	1/1:15,0:13:20.36:280,20,0	1/1:8,0:8:15.87:209,16,0	1/1:11,0:9:23.70:298,24,0	0/1:27,0:26:56.41:56,0,531	1/1:8,0:7:15.87:176,16,0	1/1:12,0:7:12.90:179,13,0	1/1:5,14:18:29.49:303,29,0	1/1:7,0:5:9.03:157,9,0	1/1:3,0:2:3.01:53,3,0	1/1:10,0:8:19.40:216,19,0	1/1:9,0:8:9.81:178,10,0	1/1:19,0:17:32:354,32,0	1/1:17,0:17:31.69:433,32,0	1/1:40,0:37:24.63:188,25,0	1/1:9,0:9:24.41:270,24,0
chr10	59612696	.	AAAG	A	2615.19	PASS	AB=0.959;AC=36;AF=0.643;AN=56;BaseQRankSum=6.264;DP=452;FS=30.314;HRun=0;HaplotypeScore=74.6680;InbreedingCoeff=0.1864;MQ=55.95;MQ0=28;MQRankSum=5.243;QD=8.84;ReadPosRankSum=1.235;VQSLOD=1.3605;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:18:16.95:276,17,0	0/0:11,0:11:32.14:0,32,454	0/0:28,0:9:18.72:0,19,213	0/0:49,0:17:11.12:0,11,374	1/1:24,0:24:42.93:377,43,0	1/1:10,0:9:20.32:160,20,0	0/1:13,0:13:43.32:57,0,43	0/0:37,0:36:99:0,100,1753	0/1:12,0:12:16.91:140,0,17	1/1:18,0:16:11.42:234,11,0	0/1:15,0:14:11.40:98,0,11	1/1:11,0:11:19.58:149,20,0	0/1:6,0:6:16.78:51,0,17	0/1:13,0:13:22.76:108,0,23	0/1:8,0:8:5.45:71,0,5	1/1:8,0:8:16.33:129,16,0	0/0:30,0:29:42.92:0,43,928	1/1:7,0:6:6:54,6,0	0/1:9,0:7:7.35:68,0,7	0/1:19,0:18:71.51:92,0,72	1/1:7,0:5:9.48:82,9,0	1/1:3,0:3:3.84:29,4,0	1/1:9,0:8:11.50:86,12,0	1/1:9,0:8:10.10:89,10,0	1/1:16,0:14:13.74:113,14,0	0/1:18,0:18:16.82:202,0,17	0/1:11,25:33:32.04:32,0,57	1/1:7,0:7:12.45:103,12,0
chr10	59612698	.	AG	A	3144.95	PASS	AB=0.900;AC=38;AF=0.679;AN=56;BaseQRankSum=5.529;DP=402;FS=10.052;HRun=1;HaplotypeScore=54.5737;InbreedingCoeff=0.3306;MQ=59.85;MQ0=24;MQRankSum=3.509;QD=12.84;ReadPosRankSum=2.474;VQSLOD=1.5433;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:15:21.02:280,21,0	0/0:11,0:11:32.10:0,32,369	0/0:29,1:11:23.30:0,23,214	0/0:48,0:18:5.77:0,6,320	1/1:19,0:19:50.07:442,50,0	1/1:8,0:8:22.75:182,23,0	0/1:13,0:13:38.49:147,0,38	0/0:38,0:37:99:0,101,1314	1/1:9,0:9:5.07:148,5,0	1/1:14,0:13:16.02:264,16,0	1/1:10,0:10:8.60:144,9,0	1/1:10,0:10:23.92:200,24,0	0/1:6,0:6:1.20:87,0,1	0/1:11,0:11:12.67:112,0,13	0/1:6,0:6:1.82:90,0,2	1/1:7,0:7:20.96:182,21,0	0/0:30,0:29:17.19:0,17,658	1/1:4,0:3:6.01:54,6,0	0/1:3,4:5:4.93:92,0,5	0/1:18,0:17:48.22:92,0,48	1/1:7,0:5:12.01:107,12,0	1/1:3,0:3:4.56:31,5,0	1/1:6,0:5:12.01:108,12,0	1/1:8,0:7:11.31:91,11,0	1/1:8,0:6:13.26:113,13,0	0/1:4,14:18:17.51:247,0,18	0/1:32,0:29:9.53:10,0,43	1/1:6,0:6:12.45:103,12,0
chr10	59614003	.	CTT	C	5079.58	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=11.407;DP=603;FS=3.893;HRun=5;HaplotypeScore=76.3253;InbreedingCoeff=0.9952;MQ=62.22;MQ0=2;MQRankSum=0.566;QD=32.35;ReadPosRankSum=3.598;VQSLOD=4.4782;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,104,2093	0/0:6,0:6:18.03:0,18,292	0/0:23,0:18:43.70:0,44,735	0/0:23,0:16:39.13:0,39,704	0/0:29,0:29:81.13:0,81,1327	1/1:3,22:25:54.18:756,54,0	1/1:1,17:18:39.13:546,39,0	0/0:20,0:20:60.20:0,60,1074	0/0:23,0:23:63.21:0,63,1127	0/0:30,0:30:81.26:0,81,1405	0/0:22,0:22:63.21:0,63,1120	1/1:0,20:20:45.15:630,45,0	1/1:1,22:23:54.18:756,54,0	0/0:14,0:14:42.14:0,42,765	0/0:23,0:23:69.23:0,69,1238	0/0:23,0:23:66.23:0,66,1210	0/0:20,0:19:54.17:0,54,959	0/0:10,0:10:30.07:0,30,487	0/0:25,0:25:66.19:0,66,1064	0/0:22,0:22:57.20:0,57,1045	0/0:17,0:17:51.16:0,51,900	1/1:0,27:27:72.24:1007,72,0	1/1:1,21:22:41.97:588,42,0	1/1:1,21:22:57.19:798,57,0	0/0:17,0:17:48.16:0,48,874	0/0:24,0:24:69.23:0,69,1233	0/0:26,0:26:72.23:0,72,1242	0/0:6,0:6:14.62:0,15,185
chr10	59615555	.	ATG	A	889.38	PASS	AB=0.847;AC=16;AF=0.364;AN=44;BaseQRankSum=-1.241;DP=513;FS=0.000;HRun=0;HaplotypeScore=82.9120;InbreedingCoeff=0.2940;MQ=43.22;MQ0=93;MQRankSum=0.450;QD=5.08;ReadPosRankSum=3.963;VQSLOD=2.3466;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:11,0:9:0:0,0,0	0/0:6,0:9:10.07:0,10,64	./.	./.	0/1:17,4:18:32.48:86,0,32	./.	0/0:27,0:17:8.94:0,9,69	0/0:18,0:9:3.01:0,3,41	0/1:8,6:14:35.61:56,0,36	1/1:12,3:13:9.02:98,9,0	1/1:15,4:19:8.53:79,9,0	0/0:20,0:17:2.88:0,3,16	./.	0/0:11,0:20:15.03:0,15,180	1/1:10,9:16:26.66:271,27,0	0/1:10,5:17:23.92:138,0,24	0/0:16,0:19:3:0,3,26	1/1:11,4:11:11.86:112,12,0	0/1:7,1:6:23.69:24,0,32	0/0:20,0:21:12.02:0,12,136	0/0:19,0:16:6:0,6,51	./.	0/0:15,0:10:6.01:0,6,66	./.	1/1:9,7:15:14.93:163,15,0	0/0:12,0:14:17.41:0,17,192	0/1:12,1:16:14.05:14,0,124	0/0:3,0:4:8.99:0,9,92
chr10	59616476	.	T	TG	2471.47	PASS	AB=0.666;AC=15;AF=0.268;AN=56;BaseQRankSum=10.326;DP=541;FS=1.611;HRun=0;HaplotypeScore=111.1880;InbreedingCoeff=0.2358;MQ=68.12;MQ0=5;MQRankSum=-1.195;QD=10.47;ReadPosRankSum=8.965;VQSLOD=3.4872;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:54.48:0,54,290	0/0:6,0:6:13.47:0,13,60	0/0:25,0:16:41.02:0,41,408	0/0:26,0:20:36.32:0,36,392	0/0:21,0:21:54.26:0,54,281	0/0:23,0:23:52.27:0,52,523	0/0:12,0:12:28.87:0,29,295	0/0:34,0:33:72.87:0,73,365	0/0:14,0:14:13.33:0,13,162	1/1:6,9:15:2.12:188,2,0	0/1:11,16:27:2.01:328,0,2	0/0:13,0:13:39:0,39,371	0/0:20,0:20:56.71:0,57,560	1/1:5,19:24:30.86:358,31,0	1/1:5,12:17:3.37:203,3,0	0/1:6,11:18:20.18:193,0,20	0/0:25,0:24:25.81:0,26,116	0/0:17,0:17:46.55:0,47,258	0/1:9,8:17:56.16:144,0,56	0/1:13,11:24:50.46:199,0,50	0/1:8,6:14:20.02:131,0,20	0/0:12,0:12:33.05:0,33,359	0/0:25,0:25:60.93:0,61,569	0/0:10,0:10:26.96:0,27,264	0/1:3,10:13:3.59:179,0,4	0/1:12,20:32:37.18:385,0,37	0/1:11,16:26:0.94:315,0,1	0/1:7,1:8:10.94:11,0,62
chr10	59616477	.	T	TG	6802.27	PASS	AB=0.786;AC=40;AF=0.714;AN=56;BaseQRankSum=3.843;DP=542;FS=31.015;HRun=0;HaplotypeScore=102.4748;InbreedingCoeff=-0.0394;MQ=67.14;MQ0=5;MQRankSum=1.476;QD=13.88;ReadPosRankSum=8.735;VQSLOD=3.5024;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:24:17.49:65,0,17	1/1:1,5:6:3.83:152,4,0	0/0:25,0:15:17.97:0,18,289	0/0:27,0:21:42.27:0,42,398	0/1:20,0:20:18.72:27,0,19	0/1:9,0:23:87.20:87,0,150	0/1:3,0:12:65.35:85,0,65	1/1:4,31:34:78:820,78,0	0/1:12,0:12:8.63:9,0,18	1/1:6,9:15:40.39:361,40,0	1/1:11,15:27:50.82:502,51,0	0/1:7,0:13:55.22:55,0,102	0/1:11,2:20:83.62:84,0,206	1/1:4,19:23:56.84:527,57,0	1/1:7,12:19:43.03:409,43,0	1/1:5,12:18:38.14:378,38,0	1/1:2,23:24:38.85:526,39,0	0/1:19,0:19:6.03:68,0,6	1/1:10,8:18:32.18:308,32,0	1/1:12,11:23:46.55:411,47,0	1/1:7,6:13:24.16:219,24,0	0/1:5,0:11:58.33:58,0,107	0/1:11,1:24:99:141,0,162	0/1:5,0:10:62.38:70,0,62	1/1:3,10:13:27.65:274,28,0	1/1:11,20:31:60.20:672,60,0	1/1:11,16:26:38.30:462,38,0	0/1:8,1:9:32.10:32,0,50
chr10	59616659	.	T	TA	9169.36	PASS	AB=0.730;AC=46;AF=0.821;AN=56;BaseQRankSum=-2.097;DP=481;FS=1.095;HRun=9;HaplotypeScore=61.0871;InbreedingCoeff=0.7336;MQ=71.59;MQ0=0;MQRankSum=-2.423;QD=22.04;ReadPosRankSum=5.425;VQSLOD=5.2706;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,10:12:24.06:266,24,0	0/0:9,0:9:23.99:0,24,208	0/0:8,0:9:17.99:0,18,156	0/1:7,1:8:13.73:14,0,41	1/1:5,26:31:58.71:780,59,0	1/1:5,0:14:19.89:99,20,0	1/1:0,0:16:45.45:227,45,0	0/0:34,0:34:80.94:0,81,699	1/1:3,11:14:33.09:365,33,0	1/1:5,18:23:54.15:597,54,0	1/1:1,15:16:45.04:481,45,0	1/1:2,0:12:25.57:128,26,0	1/1:6,0:28:59.84:306,60,0	1/1:2,20:22:54.15:597,54,0	1/1:3,16:19:22.21:472,22,0	1/1:2,15:17:42.11:465,42,0	0/0:13,0:13:29.98:0,30,260	1/1:3,3:6:6.02:66,6,0	1/1:2,13:15:42.11:465,42,0	1/1:2,33:35:99:1094,99,0	0/1:3,9:12:22.03:235,0,22	1/1:0,1:13:31.42:175,31,0	1/1:3,0:15:31.37:162,31,0	1/1:0,0:8:22.73:114,23,0	1/1:4,14:18:36.10:398,36,0	1/1:1,18:19:54.13:587,54,0	1/1:4,34:36:41.15:910,41,0	1/1:0,5:5:15.04:166,15,0
chr10	59617351	.	T	TACACTTTTGTATGTGTGAACAGGTGC	141307.72	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-4.432;DP=749;FS=15.887;HRun=0;HaplotypeScore=435.7023;InbreedingCoeff=0.9886;MQ=66.72;MQ0=0;MQRankSum=-10.931;QD=201.58;ReadPosRankSum=6.393;VQSLOD=4.3406;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:34,5:44:87.30:6515,87,0	1/1:4,3:7:21.07:2174,21,0	0/0:34,0:34:89.87:0,90,3553	0/0:14,0:14:36.12:0,36,1472	1/1:20,2:25:39.13:2225,39,0	1/1:17,2:22:54.19:4502,54,0	1/1:26,0:26:72.25:5045,72,0	1/1:52,0:52:99:9309,150,0	1/1:18,6:26:69.24:6260,69,0	1/1:37,3:42:99:10325,120,0	1/1:21,2:24:63.22:3370,63,0	1/1:30,5:39:95.54:7455,96,0	1/1:17,11:30:81.28:7543,81,0	1/1:15,9:26:75.26:7533,75,0	1/1:25,5:34:81.28:6664,81,0	1/1:25,4:30:87.30:8178,87,0	1/1:14,0:14:20.33:1745,20,0	1/1:12,1:15:36.12:3102,36,0	1/1:16,0:16:45.15:3037,45,0	1/1:28,1:29:75.26:5446,75,0	1/1:6,0:6:18.06:1379,18,0	1/1:11,1:14:27.09:1586,27,0	1/1:20,1:27:63.14:3754,63,0	1/1:22,0:22:42.14:3833,42,0	1/1:28,6:37:90.31:7755,90,0	1/1:26,4:34:99:8579,99,0	1/1:34,7:47:99:12025,123,0	1/1:4,3:11:21.07:1971,21,0
chr10	59617549	.	CT	C	1995.55	PASS	AB=0.866;AC=25;AF=0.446;AN=56;BaseQRankSum=3.779;DP=530;FS=1.823;HRun=13;HaplotypeScore=63.1465;InbreedingCoeff=0.6846;MQ=73.25;MQ0=6;MQRankSum=0.499;QD=9.78;ReadPosRankSum=3.674;VQSLOD=3.1094;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,17:24:41.72:306,42,0	0/0:1,0:3:5.85:0,6,44	0/0:26,0:16:6.10:0,6,68	0/0:23,0:13:14.02:0,14,93	1/1:5,15:20:15.53:277,16,0	1/1:2,10:12:23.86:175,24,0	1/1:0,8:8:20.88:153,21,0	0/0:15,1:34:24.74:0,25,290	1/1:4,12:16:24.57:193,25,0	0/0:26,3:30:28.38:0,28,584	0/0:28,2:31:19.75:0,20,528	1/1:2,14:17:47.25:335,47,0	1/1:0,14:15:28.76:203,29,0	0/0:19,0:19:44.99:0,45,416	0/0:24,1:25:13.38:0,13,447	0/1:15,3:18:20.63:21,0,305	0/0:8,1:26:12.37:0,12,169	1/1:2,9:11:17.87:131,18,0	0/0:21,0:22:50.21:0,50,465	0/0:24,2:26:7.10:0,7,382	0/0:3,0:3:6.01:0,6,58	1/1:2,2:4:5.96:44,6,0	1/1:6,11:18:5.86:177,6,0	1/1:1,8:10:22.89:159,23,0	0/1:19,4:23:26.35:26,0,349	0/0:17,3:20:1.25:0,1,335	0/0:33,3:36:18.45:0,18,646	0/1:7,1:8:0.94:1,0,142
chr10	59620592	.	AT	A	2939.95	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=10.215;DP=708;FS=2.868;HRun=6;HaplotypeScore=85.1373;InbreedingCoeff=0.9908;MQ=72.63;MQ0=0;MQRankSum=-1.241;QD=24.71;ReadPosRankSum=3.103;VQSLOD=3.5834;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,35:40:79.59:1010,80,0	0/0:12,0:12:33.11:0,33,434	0/0:25,0:24:29.04:0,29,642	0/0:24,1:24:26.44:0,26,620	1/1:1,37:38:99:1090,102,0	0/0:19,0:19:54.18:0,54,708	0/0:33,0:33:84.27:0,84,1104	0/0:27,0:27:66.19:0,66,828	1/1:2,14:16:36.09:387,36,0	0/0:30,0:30:84.27:0,84,1102	0/0:26,0:26:69.20:0,69,879	0/0:25,0:25:69.21:0,69,893	0/0:28,0:28:81.19:0,81,1034	0/0:20,0:20:54.17:0,54,704	0/0:21,0:21:63.20:0,63,815	0/0:28,0:28:81.25:0,81,1050	0/0:45,0:43:99:0,129,1660	1/1:2,23:25:57.14:613,57,0	0/0:14,0:14:36.12:0,36,470	0/0:28,0:28:75.22:0,75,949	0/0:17,0:17:45.09:0,45,541	0/0:16,0:16:48.16:0,48,631	0/0:30,0:30:81.26:0,81,1065	0/0:16,0:16:39.10:0,39,484	0/0:28,0:28:81.26:0,81,1064	0/0:28,0:28:78.25:0,78,1012	0/0:44,0:44:99:0,117,1518	0/0:4,0:4:12.04:0,12,158
chr10	59621700	.	AAAAAACCC	A	1090.72	PASS	AB=0.963;AC=11;AF=0.196;AN=56;BaseQRankSum=3.079;DP=691;FS=10.491;HRun=0;HaplotypeScore=157.4969;InbreedingCoeff=0.5523;MQ=62.35;MQ0=23;MQRankSum=-4.265;QD=9.92;ReadPosRankSum=3.885;VQSLOD=2.0521;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:42.56:0,43,997	0/0:11,0:11:32.95:0,33,690	0/0:93,0:24:53.04:0,53,1061	0/0:88,0:29:67.05:0,67,1190	0/0:32,0:32:75.44:0,75,1602	1/1:13,10:22:19.44:586,19,0	1/1:18,0:18:8.14:83,8,0	0/0:34,0:30:64.08:0,64,1248	0/0:18,0:18:27.09:0,27,713	0/0:20,0:20:48.01:0,48,937	0/0:29,0:29:73.94:0,74,1619	1/1:13,1:14:5.36:108,5,0	0/1:18,1:19:21.91:141,0,22	0/0:15,0:15:34.20:0,34,552	0/0:17,0:17:46.89:0,47,929	0/0:18,0:16:42.48:0,42,804	0/0:15,0:14:37.28:0,37,741	0/0:14,0:13:9.03:0,9,237	0/0:30,0:27:60.67:0,61,1256	0/0:17,0:17:42.13:0,42,975	0/0:8,0:8:17.95:0,18,359	0/1:14,1:15:18.08:176,0,18	0/1:13,0:13:16.99:111,0,17	1/1:8,0:7:2.73:40,3,0	0/0:28,0:27:76.16:0,76,1391	0/0:24,0:24:60.62:0,61,1148	0/0:22,0:21:59.90:0,60,1029	0/0:15,0:15:35.82:0,36,390
chr10	59621701	.	AAAAACCC	A	1348.85	PASS	AB=0.633;AC=13;AF=0.232;AN=56;BaseQRankSum=2.156;DP=690;FS=12.347;HRun=0;HaplotypeScore=148.4764;InbreedingCoeff=0.7734;MQ=63.22;MQ0=23;MQRankSum=-4.472;QD=12.26;ReadPosRankSum=3.828;VQSLOD=1.7270;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:39.95:0,40,869	0/0:11,0:11:29.72:0,30,581	0/0:92,0:24:44.88:0,45,909	0/0:88,0:31:70.45:0,70,1216	0/0:32,0:32:72.49:0,72,1366	1/1:19,4:22:35.86:635,36,0	1/1:17,1:18:7.94:105,8,0	0/0:34,0:30:57.20:0,57,1040	0/0:18,0:18:27.09:0,27,628	0/0:21,0:21:47.37:0,47,811	0/0:29,0:29:69.54:0,70,1372	1/1:6,8:14:5.78:116,6,0	0/1:8,11:19:4.92:181,0,5	0/0:15,0:15:32.28:0,32,437	0/0:18,0:18:46.24:0,46,831	0/0:18,0:16:37.06:0,37,658	0/0:16,0:15:35.31:0,35,659	0/0:14,0:13:9.03:0,9,211	0/0:29,0:26:53.59:0,54,1048	0/0:17,0:17:37.39:0,37,860	0/0:7,0:7:16.08:0,16,278	1/1:8,7:15:11.59:222,12,0	1/1:5,8:13:0.14:189,0,0	1/1:3,5:7:2.68:61,3,0	0/0:28,0:27:69.96:0,70,1098	0/0:25,0:25:61.31:0,61,1014	0/0:22,0:21:55.83:0,56,773	0/0:13,0:13:25.93:0,26,251
chr10	59621702	.	AAAACCC	A	1168.74	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=1.468;DP=680;FS=32.479;HRun=0;HaplotypeScore=138.0253;InbreedingCoeff=0.8740;MQ=63.56;MQ0=23;MQRankSum=-5.660;QD=11.03;ReadPosRankSum=2.944;VQSLOD=1.1547;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:36.12:0,36,778	0/0:11,0:11:21.07:0,21,487	0/0:88,0:23:43.74:0,44,806	0/0:87,0:32:66.98:0,67,1121	0/0:31,0:31:52.09:0,52,1144	1/1:22,0:21:36.12:553,36,0	1/1:6,11:17:5.89:104,6,0	0/0:34,0:30:42.12:0,42,942	0/0:18,0:18:27.02:0,27,564	0/0:22,0:22:30.10:0,30,698	0/0:29,0:29:51.64:0,52,1132	1/1:13,0:13:5.61:95,6,0	1/1:18,0:18:11.89:175,12,0	0/0:15,0:15:17.96:0,18,329	0/0:18,0:18:34:0,34,710	0/0:17,0:15:24.08:0,24,525	0/0:16,0:15:25.02:0,25,555	0/0:13,0:12:9.03:0,9,197	0/0:29,0:26:39.55:0,40,887	0/0:17,0:17:33.11:0,33,767	0/0:7,0:7:9.92:0,10,213	1/1:15,0:15:12.04:188,12,0	1/1:12,1:13:11.93:183,12,0	1/1:8,0:7:3.01:48,3,0	0/0:29,0:28:40.08:0,40,893	0/0:25,0:25:37.07:0,37,802	0/0:23,0:22:27.09:0,27,599	0/0:13,0:13:9.03:0,9,174
chr10	59622364	.	T	TTTCC	3199.69	PASS	AB=0.806;AC=31;AF=0.620;AN=50;BaseQRankSum=-9.264;DP=668;FS=14.241;HRun=0;HaplotypeScore=155.4239;InbreedingCoeff=0.7695;MQ=54.74;MQ0=4;MQRankSum=4.082;QD=8.08;ReadPosRankSum=-1.179;VQSLOD=2.0361;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:35,0:35:20.91:182,21,0	0/0:6,0:12:8.98:0,9,77	./.	./.	1/1:33,0:33:18.32:178,18,0	0/0:19,0:19:17.62:0,18,180	0/0:27,0:26:2.84:0,3,14	./.	1/1:20,0:19:11.94:126,12,0	1/1:14,6:20:15.04:304,15,0	1/1:20,6:26:15.05:283,15,0	0/0:33,0:33:43.92:0,44,431	0/0:26,0:26:11.97:0,12,133	1/1:13,11:26:12.04:278,12,0	1/1:9,10:19:3.01:69,3,0	1/1:18,9:28:9.03:209,9,0	0/0:19,0:28:9:0,9,80	1/1:32,0:32:8.88:76,9,0	1/1:17,5:22:15.05:293,15,0	1/1:24,6:30:15.05:323,15,0	1/1:17,0:17:15.05:335,15,0	0/0:19,0:19:20.42:0,20,197	0/0:15,0:15:14.56:0,15,96	0/0:27,0:27:17.24:0,17,195	1/1:24,0:24:14.45:168,14,0	1/1:26,4:30:12.03:232,12,0	0/1:19,5:25:4.94:262,0,5	1/1:7,2:9:3.01:69,3,0
chr10	59625053	.	GA	G	4283.37	PASS	AB=0.676;AC=38;AF=0.679;AN=56;BaseQRankSum=8.772;DP=585;FS=0.389;HRun=14;HaplotypeScore=78.6077;InbreedingCoeff=0.5818;MQ=68.85;MQ0=2;MQRankSum=-1.095;QD=9.63;ReadPosRankSum=3.573;VQSLOD=4.4574;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,2:22:6.87:0,7,343	0/0:12,1:13:18.38:0,18,300	0/0:23,0:15:20.67:0,21,155	0/0:11,0:5:3:0,3,27	0/0:27,2:30:30.74:0,31,554	1/1:2,0:22:36.44:106,36,0	1/1:0,0:12:20.37:60,20,0	0/1:25,3:29:7.77:8,0,346	1/1:7,18:26:46.08:346,46,0	1/1:7,23:34:54.59:469,55,0	0/1:7,19:26:15.18:333,0,15	1/1:2,0:16:24.89:71,25,0	1/1:1,0:14:20.37:60,20,0	1/1:6,15:21:5.60:267,6,0	1/1:1,20:21:53.53:370,54,0	1/1:4,18:23:5.18:284,5,0	0/0:22,1:23:39.44:0,39,500	0/0:16,2:18:7.53:0,8,344	1/1:7,10:17:30.48:204,30,0	1/1:10,24:34:25.88:461,26,0	0/1:4,6:10:7.05:102,0,7	1/1:5,0:29:48.86:143,49,0	1/1:4,0:25:40.91:120,41,0	1/1:1,0:10:6.10:18,6,0	1/1:6,13:23:18.89:238,19,0	0/1:7,15:22:5.15:257,0,5	1/1:5,17:25:53.63:346,54,0	1/1:4,1:5:2.97:21,3,0
chr10	59625871	.	TG	T	2519.25	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=10.844;DP=606;FS=0.858;HRun=6;HaplotypeScore=111.2030;InbreedingCoeff=0.9955;MQ=70.07;MQ0=3;MQRankSum=-2.806;QD=22.90;ReadPosRankSum=1.186;VQSLOD=2.3633;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:36:74.90:0,75,834	0/0:7,0:7:14.99:0,15,175	0/0:47,0:27:51.76:0,52,517	0/0:29,0:19:41.90:0,42,436	0/0:22,0:22:60:0,60,713	1/1:4,18:21:62.84:624,63,0	1/1:8,8:16:38.54:356,39,0	0/0:30,0:30:69.15:0,69,796	0/0:17,0:17:51.02:0,51,591	0/0:21,0:21:57.10:0,57,699	0/0:23,0:23:59.19:0,59,649	1/1:4,8:11:32.77:316,33,0	1/1:4,13:17:44.56:429,45,0	0/0:19,0:19:50.98:0,51,616	0/0:17,0:17:38.92:0,39,416	0/0:22,0:22:48.01:0,48,542	0/0:40,0:40:99:0,111,1379	0/0:10,0:9:20.93:0,21,214	0/0:23,0:23:60.07:0,60,684	0/0:35,0:35:99:0,99,1190	0/0:13,0:12:23.07:0,23,246	1/1:2,14:16:40.35:378,40,0	1/1:4,11:16:38.45:386,38,0	1/1:4,7:10:26.24:228,26,0	0/0:16,0:16:41.91:0,42,445	0/0:24,0:24:69.14:0,69,813	0/0:32,0:32:87.12:0,87,1044	0/0:12,0:12:36.10:0,36,451
chr10	59625893	.	T	TTTGTTGTTG	8431.32	PASS	AB=0.882;AC=23;AF=0.411;AN=56;BaseQRankSum=-9.757;DP=596;FS=1.172;HRun=0;HaplotypeScore=185.5082;InbreedingCoeff=0.8138;MQ=50.18;MQ0=12;MQRankSum=0.765;QD=30.66;ReadPosRankSum=-3.125;VQSLOD=4.1374;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:42:22.79:0,23,583	0/0:4,0:4:9.03:0,9,243	0/0:36,0:10:2.80:0,3,13	0/0:30,0:15:6.02:0,6,80	0/0:12,0:26:20.96:0,21,361	0/0:18,0:19:17.88:0,18,196	0/0:5,0:8:10.23:0,10,117	0/0:23,0:23:21.02:0,21,213	0/0:8,0:15:15.05:0,15,314	1/1:13,12:28:48.12:1369,48,0	1/1:13,10:25:27.09:1051,27,0	0/0:9,0:12:20.81:0,21,290	0/0:11,0:16:30.83:0,31,351	1/1:9,8:22:15.05:631,15,0	1/1:6,9:19:14.92:677,15,0	1/1:8,11:20:9.03:407,9,0	0/0:36,0:36:69.17:0,69,1576	0/0:2,0:7:3.01:0,3,63	1/1:21,1:21:18.06:583,18,0	1/1:19,12:32:27.09:782,27,0	1/1:9,6:16:12.04:375,12,0	0/0:10,0:18:33.01:0,33,384	0/0:10,0:14:15.01:0,15,204	0/0:11,0:12:8.90:0,9,96	1/1:7,7:16:9.03:404,9,0	1/1:16,12:29:36.12:1127,36,0	1/1:17,9:29:21.96:895,22,0	0/1:13,1:14:9.61:130,0,10
chr10	59625904	.	TG	T	1826.74	PASS	AB=0.745;AC=7;AF=0.125;AN=56;BaseQRankSum=11.250;DP=572;FS=0.998;HRun=1;HaplotypeScore=125.8072;InbreedingCoeff=-0.1305;MQ=50.03;MQ0=11;MQRankSum=-8.728;QD=17.23;ReadPosRankSum=1.923;VQSLOD=4.0520;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,1:41:19.89:0,20,594	0/0:4,0:4:12.04:0,12,187	0/0:32,0:11:26.89:0,27,344	0/0:29,1:15:26.24:0,26,501	0/0:23,0:23:22.17:0,22,362	0/1:14,5:19:99:261,0,327	0/1:5,2:7:64.70:135,0,65	0/0:24,0:24:72.22:0,72,1033	0/0:11,0:11:7.80:0,8,144	0/0:24,0:23:69.21:0,69,987	0/0:26,0:25:72.20:0,72,939	0/1:8,5:12:73.89:266,0,74	0/1:12,9:21:99:505,0,112	0/0:21,0:21:39.07:0,39,468	0/0:20,0:20:33.08:0,33,424	0/0:22,0:22:39.10:0,39,510	0/0:36,0:36:99:0,108,1656	0/0:8,0:8:5.11:0,5,83	0/0:20,0:18:54.16:0,54,725	0/0:32,0:32:87.27:0,87,1206	0/0:15,0:15:21.06:0,21,299	0/1:12,3:15:70.93:247,0,71	0/1:10,5:15:99:210,0,163	0/1:7,9:15:10.39:334,0,10	0/0:15,0:15:23.97:0,24,255	0/0:29,0:29:81.24:0,81,1139	0/0:23,0:23:55.87:0,56,704	0/0:9,0:8:21.06:0,21,250
chr10	59625941	.	T	TG	4356.69	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=1.445;DP=540;FS=2.339;HRun=3;HaplotypeScore=120.9218;InbreedingCoeff=0.9923;MQ=58.81;MQ0=3;MQRankSum=-2.810;QD=34.30;ReadPosRankSum=4.764;VQSLOD=4.1924;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:37:93.03:0,93,1025	0/0:8,0:8:24.06:0,24,278	0/0:38,0:29:46.71:0,47,757	0/0:35,0:30:60.78:0,61,700	0/0:31,0:31:75.89:0,76,844	1/1:3,13:17:39.12:525,39,0	1/1:3,16:19:45.06:603,45,0	0/0:26,0:26:69.11:0,69,773	0/0:11,0:11:27.05:0,27,308	0/0:19,0:19:53.93:0,54,569	0/0:19,0:19:53.99:0,54,577	1/1:1,19:19:51.06:683,51,0	1/1:2,19:21:63.14:847,63,0	0/0:20,0:20:41.95:0,42,427	0/0:17,0:17:26.91:0,27,307	0/0:14,0:14:24.02:0,24,270	0/0:28,0:28:75.12:0,75,853	0/0:8,0:8:14.99:0,15,162	0/0:14,0:14:39.03:0,39,422	0/0:12,0:12:27.07:0,27,307	0/0:14,0:14:26.98:0,27,303	1/1:2,13:15:44.86:526,45,0	1/1:1,18:19:48.05:636,48,0	1/1:1,15:16:41.98:536,42,0	0/0:15,0:15:27.07:0,27,312	0/0:24,0:24:68.91:0,69,725	0/0:15,0:15:33.05:0,33,366	0/0:6,0:6:14.85:0,15,113
chr10	59626295	.	T	TA	3433.52	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=-8.388;DP=572;FS=0.000;HRun=9;HaplotypeScore=65.4903;InbreedingCoeff=0.7151;MQ=59.98;MQ0=1;MQRankSum=0.984;QD=20.81;ReadPosRankSum=1.800;VQSLOD=4.2118;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,46:50:99:1305,120,0	0/0:7,0:7:21:0,21,182	0/0:24,0:14:26.96:0,27,229	0/0:14,0:11:10.66:0,11,167	1/1:4,32:36:90.16:966,90,0	0/0:23,0:23:2.14:0,2,9	0/1:12,0:11:0.01:0,0,1	0/0:24,0:24:50.96:0,51,443	1/1:4,22:26:57.15:631,57,0	0/0:23,0:23:65.96:0,66,567	0/0:26,0:26:65.97:0,66,573	0/0:11,0:11:0:0,0,1	0/1:13,0:13:0.24:0,0,2	0/0:25,0:25:62.94:0,63,543	0/0:17,0:17:44.98:0,45,391	0/0:16,0:16:47.96:0,48,410	0/0:31,0:31:77.95:0,78,672	1/1:8,16:24:48.13:531,48,0	0/0:21,0:18:47.99:0,48,417	0/0:18,0:18:41.99:0,42,364	0/0:14,0:14:35.97:0,36,308	0/1:4,0:4:0:0,0,1	0/0:18,0:18:1.26:0,1,14	0/0:15,0:15:0.94:0,1,3	0/0:22,0:22:65.95:0,66,565	0/0:20,0:20:50.98:0,51,441	0/0:26,0:26:4.09:0,4,344	0/0:12,0:12:35.99:0,36,313
chr10	59626304	.	AC	A	2535.49	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=4.576;DP=556;FS=17.667;HRun=1;HaplotypeScore=64.2548;InbreedingCoeff=0.9750;MQ=60.14;MQ0=1;MQRankSum=0.747;QD=27.56;ReadPosRankSum=-0.151;VQSLOD=2.0817;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,131,730	0/0:8,0:8:24.05:0,24,282	0/0:24,0:12:36.04:0,36,411	0/0:13,0:12:10.93:0,11,310	0/0:33,0:33:29.89:0,30,370	1/1:1,20:21:57.15:761,57,0	1/1:1,11:11:21.07:292,21,0	0/0:23,0:23:68.72:0,69,787	0/0:23,0:23:57.56:0,58,311	0/0:24,0:24:72.14:0,72,872	0/0:26,0:26:72.05:0,72,890	1/1:1,11:12:18.06:250,18,0	1/1:0,15:15:30.10:417,30,0	0/0:22,0:22:66.20:0,66,835	0/0:17,0:17:51.13:0,51,630	0/0:18,0:18:53.88:0,54,636	0/0:30,0:30:87.20:0,87,1061	0/0:18,0:18:48.71:0,49,263	0/0:25,0:22:66.15:0,66,774	0/0:17,0:17:51.05:0,51,592	0/0:14,0:14:42.10:0,42,513	1/1:3,0:3:9.02:111,9,0	1/1:1,14:15:34.89:443,35,0	1/1:0,14:14:33.11:457,33,0	0/0:26,0:25:75.09:0,75,862	0/0:18,0:18:54.17:0,54,687	0/0:20,0:20:13.20:0,13,619	0/0:12,0:12:36.12:0,36,465
chr10	59626407	.	GTGCC	G	2181.30	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.905;DP=611;FS=18.702;HRun=0;HaplotypeScore=97.0310;InbreedingCoeff=0.9930;MQ=65.81;MQ0=0;MQRankSum=-1.016;QD=32.08;ReadPosRankSum=0.758;VQSLOD=2.3689;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:90.27:0,90,2070	1/1:2,15:17:32.19:502,32,0	0/0:30,0:22:42.08:0,42,793	0/0:19,0:15:30.10:0,30,731	0/0:16,0:16:33.11:0,33,797	0/0:16,0:15:45.15:0,45,1122	0/0:46,0:46:99:0,120,2854	1/1:4,16:20:48.10:697,48,0	0/0:25,0:25:60.21:0,60,1450	0/0:20,0:20:48.15:0,48,1078	0/0:19,0:19:42.13:0,42,996	0/0:20,0:20:48.15:0,48,1089	0/0:20,0:20:45.14:0,45,1034	0/0:27,0:27:72.17:0,72,1514	0/0:22,0:22:45.14:0,45,1063	0/0:30,0:30:72.23:0,72,1740	1/1:5,26:31:66.23:1126,66,0	0/0:14,0:14:36.12:0,36,901	0/0:17,0:17:39.10:0,39,792	0/0:17,0:17:36.11:0,36,797	0/0:37,0:37:96.21:0,96,2123	0/0:11,0:11:24.08:0,24,601	0/0:9,0:9:18.03:0,18,334	0/0:23,0:23:66.23:0,66,1654	0/0:16,0:16:42.13:0,42,936	0/0:21,0:21:42.13:0,42,933	0/0:25,0:25:60.17:0,60,1356	0/0:7,0:7:18.06:0,18,388
chr10	59629259	.	TGCTG	T	6125.07	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=12.829;DP=548;FS=3.740;HRun=0;HaplotypeScore=92.7914;InbreedingCoeff=0.9988;MQ=91.41;MQ0=1;MQRankSum=-8.648;QD=47.85;ReadPosRankSum=1.161;VQSLOD=5.1287;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,102,2738	0/0:14,0:14:42.14:0,42,1151	0/0:20,0:20:60.19:0,60,1518	0/0:27,0:27:81.11:0,81,1984	0/0:21,0:21:57.20:0,57,1558	1/1:2,16:18:36.12:676,36,0	1/1:2,20:22:54.14:979,54,0	0/0:23,0:23:57.20:0,57,1542	0/0:25,0:25:75.26:0,75,2042	0/0:16,0:16:45.15:0,45,1171	0/0:14,0:14:42.14:0,42,1138	1/1:0,20:20:57.20:1104,57,0	1/1:1,23:24:66.23:1278,66,0	0/0:13,0:13:39.13:0,39,1058	0/0:22,0:22:66.23:0,66,1808	0/0:19,0:19:57.20:0,57,1553	0/0:21,0:21:60.21:0,60,1600	0/0:17,0:17:51.18:0,51,1397	0/0:25,0:25:66.23:0,66,1789	0/0:22,0:22:60.21:0,60,1643	0/0:22,0:22:66.23:0,66,1808	1/1:0,13:13:39.13:735,39,0	1/1:1,13:14:39.13:713,39,0	1/1:2,15:16:33.11:640,33,0	0/0:8,0:8:21.07:0,21,574	0/0:19,0:19:57.20:0,57,1552	0/0:28,0:28:84.29:0,84,2296	0/0:8,0:8:24.08:0,24,657
chr10	59630710	.	CTTGTTTTTTTTTTTTTTTTTTT	C	1502.82	PASS	AB=0.971;AC=17;AF=0.304;AN=56;BaseQRankSum=6.603;DP=565;FS=8.712;HRun=0;HaplotypeScore=255.5348;InbreedingCoeff=0.6670;MQ=66.55;MQ0=38;MQRankSum=-0.333;QD=8.21;ReadPosRankSum=4.284;VQSLOD=1.1945;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:17:38.71:0,39,1952	0/0:6,0:6:17.91:0,18,259	0/0:62,0:21:45.42:0,45,440	0/0:60,0:17:21.35:0,21,722	0/0:25,0:24:62.37:0,62,2186	0/0:12,0:10:26.98:0,27,655	0/0:15,0:15:38.96:0,39,529	0/0:20,0:20:53.24:0,53,931	0/0:10,0:9:21:0,21,1055	0/1:22,0:17:51.32:52,0,51	0/0:22,0:21:2.52:0,3,8	0/0:13,0:9:24.01:0,24,473	0/0:18,0:18:47.99:0,48,912	1/1:13,0:12:5.81:167,6,0	0/0:14,0:14:5.55:0,6,212	0/1:19,0:18:0.08:0,0,9	0/0:27,0:27:71.76:0,72,2438	0/0:13,0:12:36.07:0,36,2210	1/1:22,0:18:10.07:208,10,0	0/1:20,1:21:0.28:155,0,0	1/1:10,1:10:5.84:159,6,0	0/0:17,0:16:44.96:0,45,726	0/0:17,0:14:32.82:0,33,512	0/0:12,0:11:27.80:0,28,612	1/1:12,6:18:9.32:309,9,0	1/1:22,1:23:2.52:163,3,0	1/1:19,0:18:6.52:265,7,0	1/1:9,0:9:7.43:195,7,0
chr10	59634443	.	A	AGAAG	8973.99	PASS	AC=44;AF=0.846;AN=52;BaseQRankSum=-2.486;DP=671;FS=13.206;HRun=0;HaplotypeScore=124.9770;InbreedingCoeff=0.9320;MQ=57.67;MQ0=8;MQRankSum=-3.177;QD=17.19;ReadPosRankSum=-0.402;VQSLOD=3.9570;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:69.16:0,69,966	1/1:5,0:9:9.03:156,9,0	./.	./.	0/0:18,0:18:30.08:0,30,435	1/1:19,0:19:18.06:328,18,0	1/1:23,0:23:21.07:370,21,0	1/1:30,0:30:15.49:230,15,0	0/0:27,0:27:45.15:0,45,690	1/1:9,1:17:26.27:378,26,0	1/1:12,0:17:18.45:280,18,0	1/1:28,0:27:24.08:454,24,0	1/1:30,0:29:33.58:611,34,0	1/1:13,0:21:27.09:466,27,0	1/1:21,0:30:23.14:388,23,0	1/1:23,0:28:18.06:285,18,0	1/1:30,0:31:21.01:275,21,0	0/0:26,0:26:36.09:0,36,498	1/1:18,6:21:15.05:348,15,0	1/1:19,9:28:27.09:568,27,0	1/1:16,20:38:27.09:632,27,0	1/1:16,0:16:21.07:369,21,0	1/1:23,0:22:18.52:331,19,0	1/1:30,0:30:51.17:946,51,0	1/1:18,0:26:24.08:413,24,0	1/1:12,0:15:21.07:409,21,0	1/1:16,13:28:30.03:639,30,0	1/1:9,0:9:6.02:98,6,0
chr10	59634448	.	G	GAAGGAAGG	8144.24	PASS	AC=44;AF=0.846;AN=52;BaseQRankSum=3.764;DP=656;FS=11.399;HRun=0;HaplotypeScore=170.7101;InbreedingCoeff=0.9284;MQ=57.69;MQ0=13;MQRankSum=-3.264;QD=16.00;ReadPosRankSum=0.156;VQSLOD=3.0361;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:68.37:0,68,1466	1/1:7,0:7:9.03:313,9,0	./.	./.	0/0:19,0:19:30.09:0,30,677	1/1:18,0:18:14.90:53,15,0	1/1:22,0:22:18.43:103,18,0	1/1:30,0:30:15.02:249,15,0	0/0:25,0:25:45.15:0,45,1071	1/1:17,0:17:25.61:724,26,0	1/1:18,0:18:21.46:675,21,0	1/1:29,0:28:21:96,21,0	1/1:28,0:27:28.38:109,28,0	1/1:23,0:23:27.09:1090,27,0	1/1:30,0:30:27.09:882,27,0	1/1:26,0:26:21.07:620,21,0	1/1:28,0:28:21.01:425,21,0	0/0:27,0:27:39.09:0,39,797	1/1:24,0:17:14.98:138,15,0	1/1:28,0:28:27.46:275,27,0	1/1:37,0:36:26.94:220,27,0	1/1:14,0:14:18.26:94,18,0	1/1:22,0:21:16.82:82,17,0	1/1:29,0:29:43.25:176,43,0	1/1:26,0:26:24.08:902,24,0	1/1:15,0:15:21.07:507,21,0	1/1:27,0:26:29.68:226,30,0	1/1:6,4:11:6.02:184,6,0
chr10	59634469	.	A	AAGGG	6991.96	PASS	AB=1.000;AC=27;AF=0.482;AN=56;BaseQRankSum=1.558;DP=735;FS=27.503;HRun=0;HaplotypeScore=124.4850;InbreedingCoeff=0.0453;MQ=59.12;MQ0=15;MQRankSum=0.499;QD=13.39;ReadPosRankSum=11.757;VQSLOD=1.4117;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,123,1721	0/1:13,0:13:64.52:65,0,174	0/0:11,0:7:7.67:0,8,104	0/0:20,0:10:23.97:0,24,214	0/0:25,0:25:72.04:0,72,913	1/1:0,21:22:18.06:484,18,0	1/1:4,23:28:24.04:565,24,0	0/0:33,0:33:86.98:0,87,751	0/0:23,0:23:66.03:0,66,1012	0/1:25,0:25:99:104,0,371	0/1:28,0:28:99:110,0,360	1/1:1,31:33:24.08:644,24,0	1/1:0,31:31:33.58:888,34,0	0/1:26,0:26:99:234,0,319	0/1:35,0:35:52.73:53,0,489	0/0:30,0:30:5.16:0,5,457	0/1:27,0:27:34.49:34,0,380	0/0:30,0:30:75:0,75,972	0/1:22,0:13:99:178,0,119	0/1:27,0:27:99:264,0,325	0/1:47,0:46:99:308,0,491	1/1:0,14:17:32.83:611,33,0	1/1:2,22:23:23.99:504,24,0	1/1:2,30:32:51.17:1371,51,0	0/1:29,0:29:99:123,0,408	0/1:22,0:22:97.78:98,0,368	0/1:22,0:21:99:343,0,125	0/1:10,0:10:12.38:12,0,101
chr10	59634599	.	G	GA	4282.46	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-13.177;DP=611;FS=12.093;HRun=7;HaplotypeScore=57.0300;InbreedingCoeff=0.9967;MQ=77.15;MQ0=0;MQRankSum=-0.705;QD=30.81;ReadPosRankSum=1.474;VQSLOD=4.4919;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,102,971	0/0:18,0:18:48.08:0,48,463	0/0:17,0:17:36.01:0,36,333	0/0:10,0:10:14.98:0,15,136	0/0:23,0:23:60.08:0,60,573	1/1:2,17:19:51.16:616,51,0	1/1:0,15:15:39.12:471,39,0	0/0:42,0:42:99:0,111,1072	0/0:24,0:24:54.08:0,54,521	0/0:34,0:34:99:0,102,981	0/0:13,0:13:30.05:0,30,289	1/1:6,19:25:37.50:711,38,0	1/1:3,20:23:57.17:688,57,0	0/0:19,0:19:54.08:0,54,521	0/0:28,0:28:81.13:0,81,782	0/0:22,0:22:63.08:0,63,597	0/0:26,0:26:69.10:0,69,666	0/0:18,0:18:48.08:0,48,464	0/0:15,0:15:42.07:0,42,406	0/0:31,0:31:77.75:0,78,752	0/0:15,0:15:39.05:0,39,370	1/1:1,21:22:63.19:761,63,0	1/1:4,16:20:51.11:600,51,0	1/1:0,15:15:36.11:435,36,0	0/0:36,0:36:99:0,105,1002	0/0:18,0:18:54.08:0,54,518	0/0:18,0:17:54.08:0,54,516	0/0:10,0:10:27.04:0,27,261
chr10	59636664	.	A	AGG	12751.70	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=20.557;DP=727;FS=2.414;HRun=1;HaplotypeScore=129.7229;InbreedingCoeff=0.9982;MQ=81.84;MQ0=0;MQRankSum=-5.395;QD=45.22;ReadPosRankSum=4.260;VQSLOD=5.1411;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,30:33:78.27:1399,78,0	0/0:7,0:7:18.03:0,18,251	0/0:16,0:16:48.15:0,48,689	0/0:26,0:26:72.12:0,72,983	1/1:2,27:29:69.10:1179,69,0	1/1:0,22:23:66.23:1176,66,0	1/1:3,18:21:57.19:1009,57,0	0/0:37,0:37:99:0,99,1386	1/1:2,28:30:87.30:1560,87,0	0/0:26,0:26:78.26:0,78,1177	0/0:11,0:11:33.10:0,33,484	1/1:4,24:30:63.17:1107,63,0	1/1:4,33:37:99:1773,99,0	0/0:28,1:29:29.54:0,30,1165	0/0:31,0:31:93.30:0,93,1402	0/0:30,1:30:36.39:0,36,1277	0/0:27,0:27:26.11:0,26,1096	1/1:0,16:17:45.15:819,45,0	0/0:27,0:27:69.20:0,69,1031	0/0:29,0:29:84.29:0,84,1286	0/0:56,0:56:99:0,157,2357	1/1:1,19:21:51.11:873,51,0	1/1:6,19:25:66.22:1136,66,0	1/1:2,14:16:39.13:720,39,0	0/0:16,0:16:48.16:0,48,730	0/0:31,0:31:90.31:0,90,1379	0/0:36,0:36:99:0,108,1652	0/0:9,0:9:24.08:0,24,367
chr10	59640012	.	T	TG	3925.62	PASS	AB=0.955;AC=24;AF=0.429;AN=56;BaseQRankSum=10.837;DP=617;FS=11.855;HRun=10;HaplotypeScore=90.3469;InbreedingCoeff=0.8606;MQ=70.67;MQ0=0;MQRankSum=-1.785;QD=13.73;ReadPosRankSum=2.091;VQSLOD=2.5211;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:27:53.14:346,53,0	0/1:9,1:10:5.75:6,0,123	0/0:21,0:20:19.06:0,19,218	0/1:10,0:10:13.55:14,0,103	1/1:20,1:21:26.54:174,27,0	1/1:21,0:21:50.47:374,50,0	1/1:30,0:30:30.22:329,30,0	0/0:24,0:25:37.96:0,38,301	1/1:26,0:26:68.49:533,68,0	0/0:16,0:16:14.92:0,15,119	0/0:18,0:18:32.46:0,32,253	1/1:35,1:37:84.44:613,84,0	1/1:37,1:38:85.74:597,86,0	0/0:26,0:26:45.72:0,46,443	0/0:25,0:25:59.88:0,60,489	0/0:32,0:33:79.86:0,80,636	0/0:19,0:19:44.93:0,45,369	1/1:6,1:7:14.85:115,15,0	0/0:21,1:23:11.95:0,12,287	0/0:26,0:26:38.92:0,39,319	0/0:20,0:21:40.91:0,41,317	1/1:20,2:22:41.50:320,42,0	1/1:10,0:10:17.79:130,18,0	1/1:27,0:27:37.60:377,38,0	0/0:18,0:18:46.97:0,47,375	0/0:17,0:18:43.98:0,44,350	0/0:30,0:30:77.88:0,78,637	0/0:11,0:11:23.96:0,24,195
chr10	59640022	.	G	GA	7733.46	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-10.138;DP=616;FS=22.979;HRun=0;HaplotypeScore=74.3119;InbreedingCoeff=0.9826;MQ=74.23;MQ0=0;MQRankSum=0.425;QD=29.29;ReadPosRankSum=6.280;VQSLOD=3.3659;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,25:26:54.18:743,54,0	0/0:9,0:10:21.99:0,22,298	0/0:21,0:21:57.96:0,58,600	0/0:13,0:14:6.63:0,7,301	1/1:1,16:17:32.95:399,33,0	1/1:0,23:23:51.17:696,51,0	1/1:1,23:26:52.98:722,53,0	0/0:27,0:27:74.99:0,75,820	1/1:2,24:26:69.23:931,69,0	0/0:14,0:14:35.84:0,36,356	0/0:17,0:16:41.93:0,42,490	1/1:3,34:38:92.93:1230,93,0	1/1:2,40:42:90.23:1199,90,0	0/0:25,0:25:71.76:0,72,862	0/0:25,0:25:75.12:0,75,913	0/0:31,0:31:88.98:0,89,1119	0/0:17,0:17:51.13:0,51,664	1/1:1,7:8:15.05:198,15,0	0/0:19,0:19:48.45:0,48,591	0/0:26,0:26:57:0,57,642	0/0:18,0:18:51.04:0,51,617	1/1:2,17:19:42.13:548,42,0	1/1:0,10:10:18.06:241,18,0	1/1:1,28:29:58.38:826,58,0	0/0:20,0:20:58.91:0,59,708	0/0:24,0:24:66.02:0,66,757	0/0:34,0:34:90.17:0,90,1137	0/0:9,0:9:27.07:0,27,349
chr10	59640359	.	A	ATGTGTGTGTGTG	9638.77	PASS	AB=0.897;AC=46;AF=0.821;AN=56;BaseQRankSum=-2.315;DP=816;FS=5.848;HRun=0;HaplotypeScore=375.2601;InbreedingCoeff=0.2415;MQ=40.76;MQ0=10;MQRankSum=1.346;QD=12.50;ReadPosRankSum=0.749;VQSLOD=1.6769;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:31:5.44:89,5,0	1/1:8,0:16:2.88:16,3,0	0/0:25,0:11:17.71:0,18,327	0/0:20,0:11:5.97:0,6,99	0/1:20,0:20:0:0,0,0	0/1:42,0:42:58.20:247,0,58	0/1:27,0:27:78.46:125,0,78	1/1:37,0:37:47.84:807,48,0	1/1:8,0:19:3.40:72,3,0	1/1:15,17:43:60.15:1786,60,0	1/1:26,0:26:13.14:362,13,0	1/1:24,0:56:5.11:203,5,0	0/1:44,0:47:4.53:374,0,5	1/1:13,13:30:2.10:48,2,0	1/1:34,5:40:7.70:141,8,0	1/1:8,16:26:8.90:393,9,0	0/1:10,0:10:23.06:144,0,23	1/1:2,0:7:6.02:166,6,0	1/1:21,0:20:27.01:690,27,0	0/1:2,14:20:0:0,0,0	1/1:20,0:19:9:135,9,0	1/1:53,0:53:53.44:331,53,0	1/1:51,0:53:43.11:631,43,0	1/1:16,0:37:5.47:83,5,0	1/1:16,0:19:5.14:224,5,0	1/1:26,0:25:56.41:1276,56,0	1/1:30,0:29:27.04:580,27,0	1/1:6,0:9:15.05:716,15,0
chr10	59640374	.	T	TGTGAGAGAGA	3655.66	PASS	AB=1.000;AC=35;AF=0.625;AN=56;BaseQRankSum=-3.167;DP=787;FS=49.472;HRun=0;HaplotypeScore=339.1495;InbreedingCoeff=-0.1656;MQ=38.11;MQ0=10;MQRankSum=-0.394;QD=5.06;ReadPosRankSum=-0.396;VQSLOD=0.8247;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:23:8.72:50,9,0	1/1:13,0:14:8.81:78,9,0	0/0:14,0:7:11.10:0,11,121	0/1:10,0:4:0.83:1,0,21	1/1:9,9:29:2.99:38,3,0	0/1:41,0:41:42.89:73,0,43	0/1:29,0:28:2.96:82,0,3	1/1:39,0:38:61:557,61,0	1/1:15,0:16:12.80:251,13,0	0/1:39,0:38:99:276,0,612	0/1:26,0:25:56.99:57,0,77	0/1:54,0:54:42.99:157,0,43	0/1:50,0:50:70.05:264,0,70	0/0:25,0:25:11.40:0,11,197	0/1:31,0:31:17.65:18,0,47	0/1:23,0:23:51.14:140,0,51	1/1:8,0:11:14.25:103,14,0	0/1:8,0:8:45.11:172,0,45	0/1:18,0:17:99:125,0,129	0/0:26,0:26:12.04:0,12,228	0/1:14,0:13:36.95:37,0,58	1/1:60,0:60:14.37:362,14,0	0/1:59,0:59:7.66:295,0,8	1/1:36,0:35:1.62:34,2,0	1/1:21,0:21:4.95:76,5,0	0/1:26,0:25:99:99,0,521	0/1:31,0:30:71.26:71,0,176	1/1:8,0:8:16.99:242,17,0
chr10	59640375	.	GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGTT	G	2345.56	PASS	AB=0.986;AC=19;AF=0.339;AN=56;BaseQRankSum=-7.605;DP=708;FS=6.240;HRun=0;HaplotypeScore=464.1135;InbreedingCoeff=-0.5270;MQ=38.57;MQ0=8;MQRankSum=0.183;QD=4.46;ReadPosRankSum=-7.470;VQSLOD=-0.4422;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:19,0:17:15.13:50,0,15	0/0:11,0:11:8.94:0,9,1040	0/0:12,0:7:17.72:0,18,420	0/0:8,0:3:5.97:0,6,155	0/0:25,0:23:5.98:0,6,464	0/1:40,0:40:46.25:46,0,2092	0/1:29,0:28:32.05:32,0,364	0/1:18,11:28:99:323,0,3375	0/0:16,0:15:15.98:0,16,1431	0/1:32,0:31:99:422,0,7195	0/1:23,0:22:99:248,0,1038	0/1:51,0:51:99:101,0,2059	0/0:48,0:48:44.71:0,45,4230	0/1:20,0:20:38.39:38,0,1654	0/1:28,0:28:24.14:24,0,442	0/0:21,0:21:15.05:0,15,1063	0/1:8,0:8:29.93:30,0,423	0/0:8,0:8:12.04:0,12,1415	0/1:14,0:14:19.79:20,0,1854	0/1:26,0:26:4.34:4,0,2502	0/1:12,0:11:60.90:61,0,383	0/1:58,0:58:5.22:5,0,3637	0/1:59,0:59:99:301,0,3069	0/0:33,0:32:4.15:0,4,182	0/1:22,0:21:99:193,0,110	0/1:23,0:22:99:248,0,5884	0/1:27,0:27:99:293,0,2392	0/1:6,0:6:60.72:61,0,654
chr10	59640390	.	A	AGC	52.36	PASS	AB=0.979;AC=6;AF=0.107;AN=56;BaseQRankSum=3.859;DP=757;FS=0.719;HRun=0;HaplotypeScore=275.4639;InbreedingCoeff=0.0393;MQ=41.85;MQ0=12;MQRankSum=-3.248;QD=0.30;ReadPosRankSum=1.398;VQSLOD=2.4117;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:19:8.94:0,9,69	1/1:9,0:9:3.04:12,3,0	0/0:11,0:5:14.94:0,15,122	0/0:15,0:4:3.62:0,4,12	0/0:33,0:31:24.41:0,24,199	0/0:37,3:42:28.93:0,29,156	0/1:28,0:27:13.52:14,0,43	0/0:42,0:40:64.62:0,65,468	0/0:18,0:17:15.89:0,16,122	0/0:30,0:28:68.60:0,69,674	0/0:22,0:21:6.02:0,6,78	0/1:48,3:52:85.44:85,0,116	0/0:47,2:51:2.48:0,2,264	0/0:19,0:19:20.89:0,21,222	0/0:30,0:29:2.78:0,3,44	0/0:20,0:20:15.79:0,16,107	0/0:8,0:8:8.72:0,9,77	0/0:9,0:9:11.87:0,12,82	0/0:20,0:18:47.74:0,48,406	0/0:28,0:27:29.83:0,30,261	0/0:8,0:8:2.70:0,3,34	0/1:58,2:64:45.91:46,0,180	0/0:55,2:60:1.41:0,1,229	0/0:28,2:29:2.62:0,3,20	0/1:24,0:23:2.11:2,0,14	0/0:28,0:27:74.95:0,75,738	0/0:26,0:26:20.74:0,21,208	0/0:9,0:8:14.42:0,14,91
chr10	59640410	.	A	AGT	2081.66	PASS	AB=0.990;AC=24;AF=0.429;AN=56;BaseQRankSum=4.700;DP=778;FS=0.415;HRun=0;HaplotypeScore=271.6008;InbreedingCoeff=0.3255;MQ=51.73;MQ0=12;MQRankSum=-3.324;QD=4.17;ReadPosRankSum=-2.477;VQSLOD=2.0166;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:18:14.30:0,14,91	0/1:8,0:8:4.53:5,0,21	0/0:29,0:20:44.48:0,44,476	0/0:27,0:17:9.99:0,10,158	0/0:31,0:29:35.74:0,36,282	1/1:44,2:46:34.83:321,35,0	0/1:23,1:23:5.83:129,0,6	0/0:43,0:42:63.47:0,63,584	0/0:16,0:15:28.09:0,28,209	0/0:31,0:29:34.27:0,34,357	1/1:21,0:20:7.57:51,8,0	1/1:48,2:50:20.87:379,21,0	0/1:44,2:46:49.76:229,0,50	0/1:18,0:18:7.36:12,0,7	0/0:31,0:30:3.27:0,3,8	0/1:18,0:18:9.04:9,0,25	0/0:9,0:9:1.19:0,1,58	0/0:13,0:13:17.39:0,17,153	0/0:17,0:15:10.83:0,11,162	0/1:27,0:26:17.54:44,0,18	0/0:11,0:11:6.08:0,6,43	1/1:49,2:55:55.27:510,55,0	1/1:58,2:64:32.35:416,32,0	1/1:24,2:25:9.16:63,9,0	1/1:26,0:25:4.62:26,5,0	0/1:33,0:33:36.26:36,0,135	0/1:26,0:26:23.83:29,0,24	1/1:11,0:10:0.77:7,1,0
chr10	59640413	.	T	TTG	5693.62	PASS	AB=0.882;AC=30;AF=0.536;AN=56;BaseQRankSum=1.587;DP=768;FS=19.699;HRun=0;HaplotypeScore=238.9629;InbreedingCoeff=0.4141;MQ=52.89;MQ0=11;MQRankSum=-2.033;QD=9.83;ReadPosRankSum=0.509;VQSLOD=2.7584;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:16:32.80:0,33,306	0/0:7,0:7:1.03:0,1,100	0/0:31,0:22:45.90:0,46,530	0/1:28,0:17:1.35:1,0,223	0/0:31,0:29:42.06:0,42,500	0/1:41,0:44:26.60:27,0,289	0/1:19,0:22:13.90:14,0,156	0/0:43,0:42:54.09:0,54,636	0/0:12,0:11:33.10:0,33,402	1/1:27,4:29:54.73:674,55,0	1/1:5,18:22:26.62:403,27,0	0/1:41,1:48:99:166,0,282	0/1:42,0:46:99:99,0,177	1/1:15,3:18:32.99:507,33,0	1/1:12,19:31:8.98:148,9,0	1/1:18,1:19:21.05:317,21,0	0/0:9,0:9:14.99:0,15,154	0/0:12,0:12:29.99:0,30,337	1/1:11,12:21:36.03:487,36,0	1/1:23,2:25:38.85:649,39,0	0/1:5,6:11:24.54:136,0,25	0/1:48,0:53:43.48:43,0,281	0/1:55,0:61:9.43:9,0,361	0/0:24,0:25:23.69:0,24,187	1/1:7,20:26:14.84:214,15,0	1/1:5,26:31:78.21:1200,78,0	1/1:3,22:26:29.58:451,30,0	1/1:1,9:9:9.03:147,9,0
chr10	59640797	.	T	TTTG	10723.05	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-10.525;DP=706;FS=0.000;HRun=0;HaplotypeScore=101.4468;InbreedingCoeff=0.9915;MQ=88.73;MQ0=0;MQRankSum=-4.409;QD=54.71;ReadPosRankSum=0.315;VQSLOD=6.4976;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,123,1974	0/0:5,0:5:12.04:0,12,196	0/0:30,0:30:72.03:0,72,1358	0/0:27,0:27:66.13:0,66,928	0/0:22,0:22:63.22:0,63,1027	1/1:5,21:26:69.24:1481,69,0	1/1:4,19:25:54.19:1194,54,0	0/0:37,0:37:99:0,105,1662	0/0:20,0:20:54.18:0,54,882	0/0:32,0:32:96.32:0,96,1538	0/0:19,0:19:57.19:0,57,930	1/1:3,21:25:69.24:1540,69,0	1/1:5,23:29:75.26:1647,75,0	0/0:33,0:33:93.30:0,93,1494	0/0:20,0:20:54.17:0,54,858	0/0:25,0:25:72.23:0,72,1151	0/0:35,0:35:99:0,99,1607	0/0:20,0:20:60.20:0,60,980	0/0:21,0:20:57.19:0,57,928	0/0:21,0:21:54.18:0,54,882	0/0:23,0:23:63.22:0,63,1029	1/1:8,29:38:93.32:2046,93,0	1/1:4,20:24:60.20:1278,60,0	1/1:3,26:29:68.57:1537,69,0	0/0:15,0:15:45.15:0,45,735	0/0:31,0:31:78.26:0,78,1251	0/0:25,0:25:72.24:0,72,1159	0/0:5,0:5:15.05:0,15,245
chr10	59640910	.	GGTGTGGTGGGGAGAAGCTGCTGGTCACCCTTATGCTATCCTCT	G	2289.52	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=3.648;DP=628;FS=3.219;HRun=0;HaplotypeScore=628.9395;InbreedingCoeff=0.8823;MQ=80.72;MQ0=0;MQRankSum=-3.901;QD=208.14;ReadPosRankSum=2.234;VQSLOD=2.6401;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,126,15967	1/1:0,5:5:15.05:1673,15,0	0/0:24,0:23:69.23:0,69,4242	0/0:29,0:29:87.30:0,87,6804	0/0:15,0:15:45.14:0,45,6236	0/0:15,0:15:45.15:0,45,6278	0/0:32,0:32:96.33:0,96,11465	1/1:1,0:1:3.01:66,3,0	0/0:26,0:26:78.27:0,78,10355	0/0:24,0:24:72.25:0,72,8296	0/0:16,0:16:48.13:0,48,5624	0/0:28,0:28:81.28:0,81,12400	0/0:29,0:29:87.28:0,87,14469	0/0:27,0:27:78.27:0,78,11553	0/0:35,0:35:99:0,105,17116	0/0:25,0:25:75.26:0,75,12371	1/1:0,5:5:6.02:671,6,0	0/0:22,0:22:66.23:0,66,9442	0/0:16,0:16:48.16:0,48,5315	0/0:21,0:21:63.20:0,63,8891	0/0:31,0:31:90.27:0,90,11211	0/0:27,0:27:76.14:0,76,11499	0/0:19,0:19:54.18:0,54,7019	0/0:28,0:28:81.28:0,81,13074	0/0:17,0:17:51.16:0,51,7373	0/0:26,0:26:72.25:0,72,11123	0/0:36,0:36:99:0,108,17164	0/0:6,0:6:18.06:0,18,3205
chr10	59642423	.	GT	G	1229.08	PASS	AB=1.000;AC=27;AF=0.500;AN=54;BaseQRankSum=-1.358;DP=270;FS=2.147;HRun=1;HaplotypeScore=50.2678;InbreedingCoeff=0.8106;MQ=89.93;MQ0=0;MQRankSum=-1.268;QD=10.69;ReadPosRankSum=-2.374;VQSLOD=0.7562;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,1:12:12.47:103,12,0	0/0:8,0:8:11.99:0,12,99	0/0:24,2:23:3.97:0,4,316	0/0:17,0:12:12.44:0,12,116	1/1:7,0:7:9:79,9,0	0/0:11,0:11:8.62:0,9,73	0/0:14,0:14:27.01:0,27,171	0/0:9,0:9:17.98:0,18,163	1/1:8,0:8:12.47:103,12,0	1/1:0,8:8:14.98:124,15,0	0/0:4,0:4:0.47:0,0,1	0/0:10,0:10:11.65:0,12,84	0/0:14,0:14:31.83:0,32,226	1/1:9,0:9:9.87:76,10,0	1/1:9,0:9:11.86:74,12,0	1/1:12,1:13:23.84:208,24,0	0/0:9,0:9:8.60:0,9,57	1/1:7,0:7:2.83:22,3,0	1/1:4,0:4:9.01:81,9,0	1/1:5,0:5:8.99:76,9,0	1/1:9,1:10:20.95:170,21,0	0/0:11,0:11:14.33:0,14,103	0/0:6,0:6:8.98:0,9,71	0/0:16,0:16:26.59:0,27,187	1/1:6,0:6:14.99:127,15,0	1/1:10,0:10:21:184,21,0	0/1:7,0:7:0:0,0,0	./.
chr10	59643190	.	A	AAAAAAAG	5204.79	PASS	AB=0.759;AC=14;AF=0.250;AN=56;BaseQRankSum=-7.789;DP=495;FS=1.810;HRun=0;HaplotypeScore=116.2775;InbreedingCoeff=0.8038;MQ=54.73;MQ0=19;MQRankSum=-8.524;QD=40.66;ReadPosRankSum=2.118;VQSLOD=4.7677;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:56.80:0,57,1040	0/0:8,0:7:18.06:0,18,328	0/0:8,0:5:11.86:0,12,144	0/1:10,0:8:20.96:21,0,89	0/0:33,0:32:69.17:0,69,1267	1/1:1,22:26:45.15:1635,45,0	1/1:2,7:10:12.04:365,12,0	0/0:18,0:16:22.25:0,22,274	0/0:12,0:11:27.04:0,27,487	0/0:20,0:18:47.97:0,48,612	0/0:16,0:14:31.92:0,32,343	1/1:5,8:15:15.03:545,15,0	1/1:2,10:16:15.03:495,15,0	0/0:21,0:21:33.03:0,33,449	0/0:20,0:20:30.34:0,30,425	0/0:15,0:15:33.03:0,33,458	0/0:36,0:33:50.63:0,51,793	0/0:28,0:27:63.09:0,63,1018	0/0:25,0:23:61.19:0,61,644	0/0:17,0:16:32.80:0,33,452	0/0:9,0:9:27.09:0,27,396	1/1:4,7:12:24.08:732,24,0	1/1:2,13:19:20.98:709,21,0	0/1:1,13:15:7.67:702,0,8	0/0:21,0:20:45.06:0,45,625	0/0:13,0:13:33.04:0,33,443	0/0:17,0:17:36.33:0,36,424	0/0:11,0:9:27.09:0,27,397
chr10	59643194	.	A	AG	5754.25	PASS	AB=0.531;AC=23;AF=0.411;AN=56;BaseQRankSum=-12.702;DP=504;FS=8.007;HRun=0;HaplotypeScore=71.4538;InbreedingCoeff=0.9108;MQ=58.18;MQ0=19;MQRankSum=7.373;QD=26.76;ReadPosRankSum=1.039;VQSLOD=5.1545;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:56.89:0,57,677	0/0:4,0:8:17.86:0,18,146	0/0:13,0:9:11.18:0,11,143	0/0:12,0:10:22.87:0,23,220	0/0:33,0:32:75:0,75,895	0/0:24,0:23:41.44:0,41,185	0/0:8,0:8:10.83:0,11,46	0/0:7,0:15:29.61:0,30,237	0/0:14,0:13:30.07:0,30,367	1/1:2,18:18:51.12:633,51,0	1/1:2,14:14:38.46:410,38,0	0/0:14,0:13:16.69:0,17,81	0/0:18,0:17:10.83:0,11,92	1/1:0,21:21:33.11:432,33,0	1/1:1,19:20:36.12:474,36,0	0/1:2,15:17:8.90:365,0,9	0/0:11,0:33:50.80:0,51,415	0/0:27,0:26:57.40:0,57,692	1/1:4,24:26:35.57:777,36,0	1/1:1,17:17:36.04:456,36,0	1/1:0,9:9:27.09:359,27,0	0/0:12,0:10:15.19:0,15,66	0/0:19,0:19:16.80:0,17,69	0/0:14,0:14:22.75:0,23,124	1/1:2,20:21:35.22:548,35,0	1/1:0,14:14:39.08:471,39,0	1/1:0,19:19:36.12:476,36,0	1/1:2,9:9:27.09:355,27,0
chr10	59643199	.	AG	A	251.80	PASS	AB=0.971;AC=4;AF=0.071;AN=56;BaseQRankSum=4.433;DP=498;FS=4.951;HRun=1;HaplotypeScore=90.7258;InbreedingCoeff=0.4143;MQ=61.94;MQ0=15;MQRankSum=-2.673;QD=4.27;ReadPosRankSum=-1.622;VQSLOD=-0.1832;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:42.49:0,42,494	0/1:9,0:8:4.14:75,0,4	0/0:15,1:12:4.02:0,4,168	0/0:13,0:11:10.50:0,11,161	0/0:33,0:32:71.27:0,71,655	0/0:22,0:21:43.87:0,44,257	0/0:8,0:8:10.03:0,10,73	0/1:15,1:14:10.45:143,0,10	0/0:11,3:13:12.57:0,13,270	0/0:21,0:20:59.89:0,60,507	0/0:14,0:13:17.40:0,17,237	0/0:12,0:11:17.59:0,18,108	0/0:18,0:17:8.06:0,8,126	0/0:18,0:18:35.14:0,35,273	0/0:20,0:20:37.90:0,38,288	0/0:18,0:18:38.87:0,39,314	1/1:34,0:32:11.71:143,12,0	0/0:26,0:25:62.63:0,63,604	0/0:28,0:26:75.74:0,76,645	0/0:16,0:15:35.87:0,36,290	0/0:10,0:10:29.96:0,30,251	0/0:12,0:11:14.66:0,15,161	0/0:17,0:17:32.32:0,32,201	0/0:14,0:14:0.20:0,0,116	0/0:25,0:24:52.16:0,52,425	0/0:14,0:14:41.93:0,42,352	0/0:18,0:18:38.36:0,38,293	0/0:13,0:12:35.60:0,36,279
chr10	59644360	.	T	TTGTG	3723.23	PASS	AC=48;AF=1.000;AN=48;DP=666;FS=0.000;HRun=0;HaplotypeScore=154.5846;InbreedingCoeff=-0.0713;MQ=61.40;MQ0=14;QD=6.89;VQSLOD=2.6187;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:43,0:42:30.86:354,31,0	1/1:10,0:10:2.99:24,3,0	./.	./.	1/1:22,0:22:15:205,15,0	1/1:12,0:12:5.35:47,5,0	1/1:27,0:26:6.49:96,6,0	./.	1/1:9,0:13:3.01:43,3,0	1/1:16,0:20:18.38:232,18,0	1/1:15,0:15:12.04:200,12,0	1/1:32,0:29:8.85:70,9,0	1/1:20,0:20:23.76:223,24,0	1/1:18,0:25:3.48:32,3,0	1/1:24,0:24:11.78:200,12,0	1/1:19,0:19:8.98:128,9,0	1/1:23,6:32:6.02:140,6,0	1/1:21,0:20:23.02:288,23,0	1/1:10,0:10:3.01:56,3,0	1/1:23,0:22:11.99:126,12,0	1/1:36,0:36:18.04:251,18,0	1/1:15,0:14:3:27,3,0	./.	1/1:19,0:18:2.99:23,3,0	1/1:26,7:35:9.03:160,9,0	1/1:33,0:32:36.92:477,37,0	1/1:22,0:21:18.06:266,18,0	1/1:10,0:10:5.97:58,6,0
chr10	59645124	.	TA	T	2385.99	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.854;DP=569;FS=0.000;HRun=2;HaplotypeScore=55.0061;InbreedingCoeff=0.9954;MQ=86.35;MQ0=0;MQRankSum=-0.320;QD=30.59;ReadPosRankSum=-1.299;VQSLOD=2.7133;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:90.22:0,90,1276	1/1:0,9:9:18.06:234,18,0	0/0:27,0:27:81.27:0,81,1178	0/0:14,0:14:42.14:0,42,614	0/0:26,0:26:78.26:0,78,1166	0/0:27,0:27:81.27:0,81,1212	0/0:13,0:13:39.12:0,39,565	1/1:1,31:32:90.25:1126,90,0	0/0:25,0:25:72.24:0,72,1074	0/0:25,0:25:75.25:0,75,1116	0/0:25,0:25:72.23:0,72,1059	0/0:19,0:19:57.18:0,57,832	0/0:17,0:17:51.16:0,51,743	0/0:21,0:21:63.21:0,63,944	0/0:19,0:19:54.17:0,54,788	0/0:8,0:8:24.08:0,24,360	1/1:0,37:37:90.29:1168,90,0	0/0:17,0:17:48.16:0,48,712	0/0:14,0:14:42.14:0,42,628	0/0:29,0:29:87.29:0,87,1303	0/0:18,0:18:51.16:0,51,743	0/0:17,0:17:51.16:0,51,746	0/0:10,0:10:30.10:0,30,449	0/0:8,0:8:24.08:0,24,360	0/0:30,0:30:87.24:0,87,1240	0/0:19,0:19:54.18:0,54,809	0/0:14,0:14:42.14:0,42,629	0/0:17,0:17:51.17:0,51,764
chr10	59646076	.	GA	G	2999.92	PASS	AB=0.532;AC=13;AF=0.232;AN=56;BaseQRankSum=6.680;DP=605;FS=0.376;HRun=10;HaplotypeScore=73.8791;InbreedingCoeff=0.8997;MQ=70.92;MQ0=0;MQRankSum=2.993;QD=17.96;ReadPosRankSum=3.293;VQSLOD=4.3314;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:3,0:20:45.61:0,46,238	0/0:9,0:9:24.06:0,24,265	0/0:15,1:12:12.03:0,12,131	0/0:13,1:13:13.75:0,14,110	0/0:6,0:20:45.40:0,45,228	1/1:6,32:38:80.98:703,81,0	1/1:0,15:15:29.99:260,30,0	0/0:28,1:31:36.88:0,37,588	0/0:3,0:13:28.56:0,29,152	0/0:30,0:30:72.19:0,72,791	0/0:23,0:23:57.15:0,57,630	1/1:2,22:24:65.99:573,66,0	1/1:3,23:26:56.88:495,57,0	0/0:23,0:23:54.13:0,54,585	0/0:14,0:14:39.11:0,39,431	0/0:29,0:29:63.17:0,63,697	0/0:22,0:23:56.05:0,56,631	0/0:3,0:24:51.17:0,51,260	0/0:13,0:14:38.90:0,39,385	0/0:22,0:25:59.59:0,60,611	0/0:19,0:19:35.89:0,36,366	1/1:5,17:22:20.81:409,21,0	0/1:3,22:25:9.38:386,0,9	1/1:1,16:17:41.99:365,42,0	0/0:25,1:26:49.11:0,49,750	0/0:23,0:23:31.43:0,31,555	0/0:24,0:24:56.97:0,57,596	0/0:17,0:18:50.97:0,51,545
chr10	59649034	.	G	GTT	3168.49	PASS	AB=0.750;AC=35;AF=0.625;AN=56;BaseQRankSum=-0.745;DP=552;FS=8.532;HRun=14;HaplotypeScore=76.6593;InbreedingCoeff=0.6211;MQ=69.54;MQ0=28;MQRankSum=2.691;QD=9.10;ReadPosRankSum=-0.474;VQSLOD=1.3428;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:23:37.02:0,37,321	1/1:1,3:4:6.02:79,6,0	0/1:68,0:25:8.84:9,0,107	0/0:83,0:27:11.39:0,11,119	0/0:11,0:13:20.53:0,21,203	1/1:1,8:12:7.53:279,8,0	1/1:2,10:17:37.84:427,38,0	1/1:13,6:20:22.92:238,23,0	0/0:14,0:14:38.94:0,39,325	1/1:4,1:20:18.11:113,18,0	1/1:5,1:14:19.09:68,19,0	1/1:2,10:13:34.84:410,35,0	1/1:5,5:8:11.52:127,12,0	1/1:5,1:12:12.50:73,12,0	0/1:7,0:16:27.43:27,0,52	1/1:2,0:9:14.23:51,14,0	1/1:7,11:21:16.39:443,16,0	0/0:18,0:25:46.83:0,47,431	0/1:22,0:21:2.75:3,0,210	0/0:14,0:15:29.46:0,29,237	0/0:8,0:9:17.61:0,18,137	1/1:0,6:7:17.42:205,17,0	0/1:7,13:21:0.41:445,0,0	1/1:1,4:6:12.03:146,12,0	0/1:4,0:12:13.23:15,0,13	1/1:3,1:23:17.38:166,17,0	0/0:17,1:18:5.66:0,6,310	1/1:1,0:7:12.28:46,12,0
chr10	59649219	.	CGTGTGTGTGTGTGTGT	C	2684.06	PASS	AB=0.974;AC=35;AF=0.729;AN=48;BaseQRankSum=4.142;DP=469;FS=13.262;HRun=0;HaplotypeScore=199.5414;InbreedingCoeff=0.2887;MQ=64.24;MQ0=8;MQRankSum=-4.541;QD=8.74;ReadPosRankSum=-1.333;VQSLOD=1.7321;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:32.11:0,32,604	1/1:4,0:5:3.01:112,3,0	./.	0/0:25,0:21:1.55:0,2,4	0/0:8,0:9:15.05:0,15,339	1/1:11,0:11:3.01:112,3,0	./.	0/1:32,0:32:0.18:1,0,0	0/0:12,0:12:2.37:0,2,8	1/1:12,3:15:6.02:260,6,0	./.	1/1:10,0:12:6.02:222,6,0	1/1:12,0:13:3.01:112,3,0	1/1:11,5:16:3.01:130,3,0	1/1:14,3:17:3.01:130,3,0	1/1:10,4:14:3.01:130,3,0	1/1:15,0:18:6.02:223,6,0	0/1:22,0:22:48.10:48,0,329	1/1:22,0:21:3.01:47,3,0	./.	0/0:22,3:24:3.47:0,3,26	1/1:11,0:13:6.02:223,6,0	1/1:9,0:12:9.01:246,9,0	1/1:17,0:20:3.95:113,4,0	1/1:11,1:13:9.03:236,9,0	0/1:20,0:19:41.28:41,0,167	1/1:13,1:15:9.03:304,9,0	1/1:7,5:12:3.01:130,3,0
chr10	59649844	.	A	ACT	6155.56	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-13.541;DP=824;FS=0.755;HRun=0;HaplotypeScore=92.1885;InbreedingCoeff=1.0000;MQ=79.99;MQ0=0;MQRankSum=-0.984;QD=48.09;ReadPosRankSum=0.438;VQSLOD=5.7423;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,43:48:99:2268,126,0	0/0:18,0:18:48.14:0,48,651	0/0:21,0:21:40.78:0,41,638	0/0:18,0:18:45.15:0,45,623	1/1:2,21:23:63.22:1133,63,0	0/0:15,0:15:45.13:0,45,611	0/0:38,0:38:99:0,108,1456	0/0:29,0:29:84.27:0,84,1160	1/1:0,26:26:75.26:1350,75,0	0/0:30,0:30:81.26:0,81,1114	0/0:22,0:22:66.22:0,66,923	0/0:34,0:34:99:0,102,1426	0/0:38,0:38:99:0,111,1499	0/0:38,0:38:99:0,111,1535	0/0:45,0:45:99:0,129,1780	0/0:25,0:25:72.23:0,72,985	0/0:48,0:48:99:0,132,1809	1/1:1,30:31:78.27:1404,78,0	0/0:20,0:20:54.18:0,54,754	0/0:25,0:25:60.20:0,60,837	0/0:59,0:59:99:0,168,2258	0/0:26,0:26:78.23:0,78,1055	0/0:23,0:23:63.21:0,63,878	0/0:30,0:30:84.24:0,84,1154	0/0:24,0:24:72.23:0,72,992	0/0:25,0:25:66.22:0,66,924	0/0:30,0:30:78.26:0,78,1086	0/0:15,0:15:45.13:0,45,612
chr10	59651794	.	A	AT	2303.34	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-10.982;DP=528;FS=0.000;HRun=10;HaplotypeScore=52.7975;InbreedingCoeff=0.9643;MQ=69.28;MQ0=2;MQRankSum=-0.836;QD=19.86;ReadPosRankSum=1.974;VQSLOD=4.4493;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:68.88:0,69,566	0/0:12,0:12:35.93:0,36,291	0/0:14,0:12:4.35:0,4,111	0/0:6,0:6:12.27:0,12,92	0/0:28,0:28:74.88:0,75,612	1/1:4,14:18:27.07:288,27,0	1/1:4,20:24:48.12:512,48,0	0/0:31,0:30:68.88:0,69,564	0/0:12,0:12:26.95:0,27,222	0/0:26,1:27:36.40:0,36,493	0/0:23,0:23:65.92:0,66,542	1/1:3,11:14:36.08:378,36,0	1/1:5,13:18:14.40:346,14,0	0/0:15,0:15:41.94:0,42,344	0/0:16,0:16:36.43:0,36,296	0/0:16,0:16:41.91:0,42,340	0/0:14,0:14:29.95:0,30,246	0/0:23,0:23:61.68:0,62,490	0/0:16,0:16:35.62:0,36,272	0/0:22,0:22:54.81:0,55,445	0/0:9,0:9:23.96:0,24,197	1/1:0,9:9:20.97:209,21,0	1/1:3,18:21:45.11:480,45,0	1/1:2,9:11:27.07:288,27,0	0/0:26,0:26:68.91:0,69,566	0/0:28,0:28:59.89:0,60,493	0/0:25,0:24:47.89:0,48,394	0/0:17,0:17:38.88:0,39,315
chr10	59652269	.	AT	A	6056.93	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=15.373;DP=692;FS=6.164;HRun=3;HaplotypeScore=68.0021;InbreedingCoeff=0.9998;MQ=77.79;MQ0=0;MQRankSum=-0.185;QD=34.61;ReadPosRankSum=1.377;VQSLOD=5.4683;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:51.17:0,51,734	0/0:11,0:11:33.11:0,33,475	0/0:13,0:13:33.11:0,33,460	0/0:17,0:17:45.15:0,45,647	0/0:32,0:32:93.31:0,93,1337	1/1:0,21:21:57.18:707,57,0	1/1:0,22:22:66.21:818,66,0	0/0:47,0:47:99:0,138,1957	0/0:30,0:30:90.28:0,90,1259	0/0:41,0:41:99:0,123,1756	0/0:20,0:20:60.20:0,60,864	1/1:0,27:27:78.25:967,78,0	1/1:1,30:31:47.07:1035,47,0	0/0:27,0:27:78.25:0,78,1103	0/0:32,0:32:93.31:0,93,1339	0/0:30,0:30:87.29:0,87,1253	0/0:19,0:19:57.15:0,57,781	0/0:30,0:30:87.29:0,87,1253	0/0:17,0:17:48.16:0,48,691	0/0:24,0:24:69.22:0,69,969	0/0:22,0:22:63.21:0,63,906	1/1:0,25:25:75.24:930,75,0	1/1:0,26:26:72.23:893,72,0	1/1:3,20:23:57.18:707,57,0	0/0:26,0:26:78.26:0,78,1123	0/0:21,0:21:60.19:0,60,848	0/0:30,0:30:84.23:0,84,1153	0/0:10,0:10:30.10:0,30,432
chr10	59654235	.	CATTT	C	5232.71	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=12.842;DP=544;FS=7.828;HRun=0;HaplotypeScore=87.7755;InbreedingCoeff=0.9951;MQ=71.72;MQ0=0;MQRankSum=-2.113;QD=49.37;ReadPosRankSum=3.995;VQSLOD=5.5144;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,36:36:96.33:1861,96,0	0/0:8,0:8:24.08:0,24,633	0/0:7,0:7:18.06:0,18,445	0/0:8,0:8:24.08:0,24,582	1/1:1,26:27:62.89:1220,63,0	0/0:20,0:20:57.20:0,57,1547	0/0:9,0:9:27.09:0,27,740	0/0:31,0:31:93.31:0,93,2486	1/1:0,16:16:48.16:930,48,0	0/0:30,0:30:87.30:0,87,2348	0/0:23,0:23:66.23:0,66,1764	0/0:24,0:24:69.24:0,69,1866	0/0:24,0:24:69.21:0,69,1762	0/0:18,0:18:54.15:0,54,1380	0/0:26,0:26:78.27:0,78,2130	0/0:21,0:21:63.22:0,63,1726	0/0:28,0:28:84.29:0,84,2228	1/1:2,25:27:63.19:1221,63,0	0/0:10,0:10:30.10:0,30,817	0/0:17,0:17:45.15:0,45,1233	0/0:9,0:9:27.09:0,27,740	0/0:10,0:10:30.10:0,30,803	0/0:12,0:12:33.11:0,33,904	0/0:8,0:8:24.08:0,24,618	0/0:23,0:23:69.22:0,69,1807	0/0:29,0:29:84.29:0,84,2301	0/0:29,0:29:87.30:0,87,2346	0/0:14,0:14:42.14:0,42,1146
chr10	59654456	.	T	TA	1952.35	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-7.726;DP=374;FS=24.701;HRun=4;HaplotypeScore=35.4153;InbreedingCoeff=0.9307;MQ=75.94;MQ0=0;MQRankSum=-1.903;QD=32.01;ReadPosRankSum=1.601;VQSLOD=1.5549;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,19:19:51.17:697,51,0	0/0:6,0:6:18.05:0,18,204	0/0:14,0:14:28.22:0,28,333	0/0:12,0:12:21.51:0,22,228	1/1:0,12:12:33.11:451,33,0	0/0:23,0:23:66.19:0,66,748	0/0:9,0:9:24.07:0,24,272	0/0:29,0:29:87.23:0,87,970	1/1:0,10:10:27.09:368,27,0	0/0:12,0:12:36.10:0,36,408	0/0:15,0:15:45.13:0,45,510	0/0:6,0:6:18.05:0,18,204	0/0:8,0:8:18.04:0,18,195	0/0:11,0:11:33.09:0,33,374	0/0:13,0:13:36.10:0,36,408	0/0:12,0:12:33.09:0,33,373	0/0:24,0:24:69.18:0,69,771	1/1:1,19:20:45.12:595,45,0	0/0:18,0:18:51.14:0,51,579	0/0:15,0:15:39.11:0,39,442	0/0:10,0:10:27.08:0,27,306	0/0:2,0:2:6.02:0,6,68	0/0:2,0:2:6.02:0,6,68	0/0:10,0:10:24.07:0,24,272	0/0:15,0:15:39.09:0,39,433	0/0:23,0:23:60.15:0,60,665	0/0:18,0:18:45.13:0,45,510	0/0:6,0:6:15.04:0,15,170
chr10	59654551	.	TC	T	2298.01	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=10.923;DP=480;FS=15.897;HRun=1;HaplotypeScore=51.6302;InbreedingCoeff=0.9834;MQ=64.08;MQ0=2;MQRankSum=-4.161;QD=31.48;ReadPosRankSum=-0.819;VQSLOD=1.7799;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:72.19:0,72,951	0/0:5,0:5:15.05:0,15,209	0/0:18,1:10:15.25:0,15,169	0/0:18,0:11:26.18:0,26,249	0/0:32,0:32:93.31:0,93,1293	1/1:11,3:13:39.11:525,39,0	1/1:0,10:10:24.08:330,24,0	0/0:33,0:33:64.93:0,65,1005	0/0:9,0:9:24.02:0,24,282	0/0:22,0:22:66.21:0,66,896	0/0:22,0:22:66.18:0,66,869	1/1:5,12:17:42.08:540,42,0	1/1:2,6:8:24.05:312,24,0	0/0:13,0:13:39.09:0,39,493	0/0:10,0:10:30.07:0,30,385	0/0:4,0:4:12.01:0,12,134	0/0:42,0:42:99:0,123,1583	0/0:27,0:27:69.17:0,69,940	0/0:20,0:20:60.14:0,60,758	0/0:19,0:19:57:0,57,737	0/0:7,0:7:21.07:0,21,293	1/1:1,5:6:18.01:212,18,0	1/1:3,6:9:21.07:286,21,0	1/1:6,3:9:21.07:289,21,0	0/0:23,0:23:69.18:0,69,890	0/0:17,0:17:48:0,48,613	0/0:31,0:31:93.28:0,93,1259	0/0:9,0:9:27.09:0,27,376
chr10	59654565	.	C	CT	1521.87	PASS	AB=1.000;AC=16;AF=0.286;AN=56;BaseQRankSum=9.040;DP=492;FS=5.505;HRun=8;HaplotypeScore=55.4441;InbreedingCoeff=0.8139;MQ=59.15;MQ0=4;MQRankSum=-2.252;QD=13.35;ReadPosRankSum=-0.792;VQSLOD=2.8393;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:87.05:0,87,795	0/0:6,0:6:12.01:0,12,110	0/1:14,0:5:3.23:3,0,21	0/1:20,0:7:3.54:4,0,44	0/0:34,0:34:78.02:0,78,713	1/1:10,3:12:33.10:381,33,0	1/1:6,4:10:15:156,15,0	0/0:31,0:28:59.98:0,60,546	0/0:10,0:10:30.02:0,30,274	0/0:20,0:20:51.02:0,51,467	0/0:21,0:21:54:0,54,485	1/1:10,8:18:5.63:314,6,0	1/1:3,6:9:21.06:242,21,0	0/0:14,0:14:36.01:0,36,330	0/0:14,0:14:39:0,39,351	0/0:1,0:1:3:0,3,27	0/0:43,0:42:96.02:0,96,873	0/0:26,0:26:65.96:0,66,589	0/0:15,0:15:26.99:0,27,239	0/0:24,0:24:57.01:0,57,520	0/0:7,0:7:15.01:0,15,137	1/1:1,6:7:18.04:197,18,0	1/1:6,4:10:18.01:192,18,0	1/1:12,1:13:21.04:224,21,0	0/0:22,0:22:44.99:0,45,404	0/0:20,0:20:51.02:0,51,467	0/0:28,0:28:74.99:0,75,676	0/0:12,0:12:30.01:0,30,274
chr10	59656793	.	CAT	C	2392.16	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.490;DP=745;FS=11.236;HRun=0;HaplotypeScore=87.6134;InbreedingCoeff=0.9887;MQ=80.10;MQ0=0;MQRankSum=-1.270;QD=38.58;ReadPosRankSum=-1.933;VQSLOD=4.7545;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,111,2067	1/1:2,5:7:15.05:221,15,0	0/0:29,0:28:72.23:0,72,1266	0/0:33,0:33:93.31:0,93,1681	0/0:32,0:32:93.32:0,93,1731	0/0:23,0:23:63.22:0,63,1180	0/0:35,0:35:99:0,102,1878	1/1:1,30:31:90.29:1304,90,0	0/0:26,0:26:78.27:0,78,1453	0/0:25,0:25:72.25:0,72,1347	0/0:28,0:28:84.29:0,84,1567	0/0:17,0:17:48.14:0,48,829	0/0:22,0:22:66.21:0,66,1179	0/0:30,0:30:78.27:0,78,1460	0/0:24,0:24:69.22:0,69,1253	0/0:29,0:29:84.29:0,84,1562	1/1:1,23:24:63.49:1008,63,0	0/0:30,0:30:87.30:0,87,1628	0/0:29,0:29:78.27:0,78,1452	0/0:29,0:29:84.29:0,84,1566	0/0:21,0:21:63.22:0,63,1180	0/0:29,0:29:87.29:0,87,1574	0/0:35,0:35:99:0,99,1809	0/0:21,0:21:63.22:0,63,1171	0/0:24,0:24:72.23:0,72,1304	0/0:26,0:26:75.26:0,75,1404	0/0:42,0:42:99:0,123,2235	0/0:5,0:5:15.05:0,15,281
chr10	59658221	.	CTT	C	1413.72	PASS	AB=0.716;AC=18;AF=0.321;AN=56;BaseQRankSum=1.375;DP=495;FS=0.000;HRun=16;HaplotypeScore=79.0708;InbreedingCoeff=0.5656;MQ=59.23;MQ0=3;MQRankSum=5.352;QD=7.85;ReadPosRankSum=7.629;VQSLOD=0.4594;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:12,7:19:2.37:84,0,2	0/1:6,2:8:35.19:35,0,82	0/0:19,0:11:5.57:0,6,43	0/0:5,0:4:5.85:0,6,53	1/1:12,3:18:11.73:121,12,0	1/1:5,13:18:22.95:307,23,0	0/1:7,7:15:21.70:94,0,22	0/0:36,0:37:46.17:0,46,477	1/1:6,10:16:6.25:165,6,0	0/0:15,0:25:56:0,56,456	0/0:18,0:21:50.66:0,51,459	1/1:9,6:15:0.01:129,0,0	1/1:8,7:16:17.45:137,17,0	0/0:4,0:11:20.50:0,21,190	0/0:11,0:16:35.37:0,35,338	0/0:13,1:21:12.69:0,13,298	0/0:11,1:18:12.47:0,12,318	1/1:4,6:14:20.16:177,20,0	0/0:16,0:19:29.87:0,30,267	0/0:8,0:20:23.42:0,23,241	0/0:13,0:13:21.43:0,21,210	0/1:9,8:17:7.45:125,0,7	1/1:12,9:22:5.61:220,6,0	0/0:4,0:4:2.50:0,2,9	0/0:18,0:20:38.86:0,39,362	0/0:11,0:15:25.84:0,26,264	0/0:24,0:27:44.22:0,44,419	0/0:14,0:20:15.01:0,15,148
chr10	59663417	.	CTCT	C	2076.74	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=6.413;DP=775;FS=11.151;HRun=0;HaplotypeScore=115.8834;InbreedingCoeff=0.9961;MQ=66.59;MQ0=4;MQRankSum=-3.458;QD=34.04;ReadPosRankSum=-1.441;VQSLOD=3.6496;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,102,1433	1/1:0,9:9:24.08:360,24,0	0/0:41,0:24:35.07:0,35,555	0/0:37,0:17:29.74:0,30,609	0/0:25,0:25:72.23:0,72,1004	0/0:27,0:27:69.23:0,69,1419	0/0:25,0:25:75.26:0,75,1600	1/1:4,20:23:57.18:847,57,0	0/0:23,0:23:63.21:0,63,897	0/0:28,0:28:78.27:0,78,1651	0/0:28,0:28:78.27:0,78,1665	0/0:30,0:30:75.24:0,75,1510	0/0:35,0:35:93.32:0,93,1955	0/0:22,0:22:54.19:0,54,1131	0/0:37,0:37:99:0,102,2086	0/0:29,0:29:78.26:0,78,1582	1/1:2,26:28:66.22:1012,66,0	0/0:26,0:25:69.18:0,69,934	0/0:26,0:26:60.21:0,60,1250	0/0:41,0:41:99:0,114,2398	0/0:15,0:15:39.13:0,39,832	0/0:21,0:21:63.22:0,63,1329	0/0:35,0:35:99:0,99,2009	0/0:29,0:29:78.23:0,78,1600	0/0:22,0:22:60.21:0,60,1260	0/0:27,0:27:78.27:0,78,1636	0/0:39,0:38:99:0,111,2366	0/0:7,0:7:18.06:0,18,368
chr10	59664780	.	G	GT	4839.11	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-11.309;DP=676;FS=2.620;HRun=5;HaplotypeScore=70.3867;InbreedingCoeff=0.9965;MQ=92.30;MQ0=0;MQRankSum=-5.148;QD=32.70;ReadPosRankSum=1.607;VQSLOD=5.5384;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,135,1442	0/0:9,0:9:24.06:0,24,257	0/0:36,0:35:83.29:0,83,873	0/0:38,0:38:60.47:0,60,613	0/0:16,0:16:42.11:0,42,451	1/1:1,20:21:45.15:592,45,0	1/1:2,25:27:60.17:773,60,0	0/0:29,0:29:75.16:0,75,789	0/0:19,0:19:57.13:0,57,604	0/0:21,0:21:60.14:0,60,633	0/0:11,0:11:33.08:0,33,354	1/1:0,16:16:45.15:592,45,0	1/1:0,24:24:57.18:750,57,0	0/0:35,0:35:90.22:0,90,967	0/0:22,0:22:63.13:0,63,660	0/0:24,0:24:66.14:0,66,694	0/0:33,0:33:84.18:0,84,886	0/0:29,0:29:84.17:0,84,886	0/0:16,0:16:36.06:0,36,371	0/0:21,0:21:60.09:0,60,612	0/0:45,0:45:99:0,129,1377	1/1:2,17:20:54.17:703,54,0	1/1:1,4:5:15.04:186,15,0	1/1:5,30:35:96.29:1243,96,0	0/0:17,0:17:48.12:0,48,516	0/0:23,0:23:60.12:0,60,626	0/0:26,0:26:69.17:0,69,741	0/0:10,0:10:27.06:0,27,286
chr10	59666513	.	TAA	T	6770.03	PASS	AB=0.625;AC=41;AF=0.732;AN=56;BaseQRankSum=-9.182;DP=581;FS=0.981;HRun=15;HaplotypeScore=81.7277;InbreedingCoeff=0.6192;MQ=59.47;MQ0=8;MQRankSum=1.458;QD=13.51;ReadPosRankSum=1.129;VQSLOD=4.1009;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:6,17:21:2.15:240,0,2	1/1:5,7:14:20.37:156,20,0	0/0:14,0:8:17.78:0,18,167	0/0:8,0:4:3.48:0,3,33	1/1:4,22:30:57.15:518,57,0	0/1:7,1:15:5.43:5,0,34	0/0:6,0:18:23.49:0,23,141	1/1:11,20:32:30:396,30,0	1/1:4,8:13:20.72:170,21,0	1/1:10,14:23:26.20:274,26,0	1/1:4,28:34:74.27:623,74,0	0/1:10,1:23:2.13:2,0,131	0/1:6,1:17:0.47:0,0,68	1/1:7,14:22:29.81:264,30,0	1/1:4,21:25:59.94:529,60,0	1/1:4,10:15:20.80:229,21,0	1/1:4,24:29:56.70:488,57,0	1/1:4,11:14:32.94:291,33,0	1/1:6,11:20:41.15:320,41,0	1/1:3,21:24:47.73:422,48,0	1/1:2,4:6:8.99:79,9,0	0/0:1,1:18:11.38:0,11,94	0/1:8,1:17:10.95:11,0,28	0/0:7,1:21:6.04:0,6,164	1/1:2,32:34:77.90:687,78,0	1/1:10,21:31:59.66:511,60,0	1/1:4,19:22:47.91:423,48,0	1/1:5,7:12:14.86:132,15,0
chr10	59674413	.	TA	T	2301.02	PASS	AB=0.910;AC=31;AF=0.554;AN=56;BaseQRankSum=2.084;DP=381;FS=7.423;HRun=14;HaplotypeScore=44.4351;InbreedingCoeff=0.6905;MQ=55.64;MQ0=1;MQRankSum=0.695;QD=10.09;ReadPosRankSum=2.252;VQSLOD=2.6370;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,10:16:30.93:205,31,0	1/1:2,5:7:10.14:64,10,0	0/0:14,0:6:11.87:0,12,91	0/1:12,0:6:1.30:1,0,22	1/1:5,14:20:37.72:252,38,0	1/1:2,10:13:1.02:143,1,0	1/1:1,11:13:25.84:170,26,0	1/1:9,12:22:35.56:243,36,0	1/1:5,9:15:9.49:151,9,0	0/0:15,0:15:6.41:0,6,182	0/0:15,2:16:4.71:0,5,288	1/1:3,13:15:38.67:266,39,0	1/1:4,12:16:29.65:205,30,0	0/1:5,1:6:8.56:9,0,72	0/0:11,0:10:23.99:0,24,215	0/0:11,1:12:9.37:0,9,212	1/1:5,12:18:28.40:190,28,0	1/1:2,10:12:32.72:226,33,0	0/1:16,1:15:6.95:7,0,207	0/0:15,0:15:24.03:0,24,223	0/0:13,0:13:10.04:0,10,131	1/1:0,4:4:11.90:82,12,0	1/1:0,10:10:24.26:165,24,0	1/1:2,8:10:17.68:123,18,0	0/0:17,1:18:2.69:0,3,283	0/0:8,0:8:24.02:0,24,220	0/0:22,1:22:6.89:0,7,324	0/0:6,0:7:11.85:0,12,98
chr10	59674585	.	T	TCA	7446.63	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=7.953;DP=252;FS=9.003;HRun=0;HaplotypeScore=138.3507;InbreedingCoeff=0.7906;MQ=96.01;MQ0=0;MQRankSum=-8.280;QD=34.00;ReadPosRankSum=5.141;VQSLOD=6.8045;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,7:8:23.98:253,24,0	1/1:1,2:3:9.03:127,9,0	0/0:8,0:9:19.71:0,20,347	0/0:24,0:24:54.12:0,54,850	1/1:1,9:10:27.07:326,27,0	1/1:1,8:9:24.08:309,24,0	1/1:1,11:12:33.02:386,33,0	1/1:2,2:4:12.01:131,12,0	1/1:2,17:19:57.16:708,57,0	1/1:1,7:8:24.07:314,24,0	1/1:1,6:7:17.67:181,18,0	1/1:1,6:6:17.97:209,18,0	1/1:0,7:7:21.07:265,21,0	1/1:0,6:6:18.05:214,18,0	1/1:1,9:9:24.02:274,24,0	1/1:0,7:7:21.07:271,21,0	1/1:1,5:6:15.01:171,15,0	1/1:1,5:6:15.05:194,15,0	1/1:4,7:11:29.95:375,30,0	1/1:2,12:14:38.99:473,39,0	1/1:0,1:1:2.97:20,3,0	1/1:1,8:9:26.88:294,27,0	1/1:0,9:9:24.08:303,24,0	1/1:0,3:3:5.91:53,6,0	1/1:0,6:6:17.98:194,18,0	1/1:0,14:14:42.14:554,42,0	1/1:2,17:19:57.14:713,57,0	1/1:2,2:4:12.02:133,12,0
chr10	59674588	.	T	TTTCAAAA	20073	PASS	AB=0.714;AC=51;AF=0.911;AN=56;BaseQRankSum=6.507;DP=260;FS=28.550;HRun=0;HaplotypeScore=113.0111;InbreedingCoeff=0.6096;MQ=95.15;MQ0=0;MQRankSum=-9.263;QD=88.43;ReadPosRankSum=7.057;VQSLOD=3.6057;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,7:9:6.57:678,7,0	1/1:1,2:3:5.95:213,6,0	0/0:10,0:10:23.87:0,24,595	0/0:23,0:23:62.99:0,63,1487	1/1:0,8:9:24.08:833,24,0	1/1:1,8:9:27.09:930,27,0	1/1:4,11:15:31.21:1088,31,0	0/1:3,2:5:9.89:207,0,10	1/1:3,17:20:52.29:1861,52,0	1/1:1,7:8:20.66:759,21,0	1/1:2,6:8:24.08:722,24,0	1/1:1,6:6:18.06:629,18,0	1/1:0,7:7:21.07:741,21,0	1/1:1,6:7:18.06:626,18,0	1/1:3,9:11:24.07:736,24,0	1/1:1,7:8:24.08:798,24,0	1/1:4,5:9:21.04:545,21,0	1/1:0,5:5:15.05:534,15,0	1/1:2,7:9:24.08:856,24,0	1/1:2,12:14:21.11:1254,21,0	1/1:0,1:1:3.01:73,3,0	1/1:1,8:9:9.19:805,9,0	1/1:0,9:9:24.08:844,24,0	1/1:0,3:3:6.02:172,6,0	1/1:0,6:6:18.06:572,18,0	1/1:0,14:14:42.14:1504,42,0	1/1:0,17:17:51.18:1818,51,0	1/1:2,2:4:12.03:276,12,0
chr10	59674722	.	CTT	C	2669.11	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=1.222;DP=357;FS=8.580;HRun=12;HaplotypeScore=56.2147;InbreedingCoeff=0.9527;MQ=65.83;MQ0=4;MQRankSum=0.443;QD=17.91;ReadPosRankSum=3.356;VQSLOD=2.0125;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:16:37.63:0,38,473	0/0:7,0:7:11.99:0,12,138	0/0:15,0:11:17.83:0,18,167	0/0:19,0:13:18.62:0,19,147	0/0:22,0:23:60.54:0,61,722	0/0:5,0:6:18.05:0,18,252	0/0:7,0:7:12.04:0,12,179	0/0:25,0:24:48.59:0,49,658	0/0:4,0:4:9.03:0,9,134	1/1:4,11:16:22.09:269,22,0	1/1:5,13:19:29.86:355,30,0	0/0:5,0:6:18.05:0,18,252	0/0:11,0:10:18.05:0,18,234	1/1:1,9:10:19.40:211,19,0	1/1:0,7:7:15.03:153,15,0	1/1:3,8:11:24.04:244,24,0	0/0:22,0:24:27.50:0,28,524	0/0:13,0:14:32.25:0,32,454	1/1:7,16:23:43.37:465,43,0	1/1:4,7:11:23.97:231,24,0	1/1:1,8:9:17.41:169,17,0	0/0:7,0:8:17.50:0,18,207	0/0:13,0:14:26.82:0,27,290	0/0:6,0:7:12.03:0,12,163	1/1:3,10:13:12.14:252,12,0	1/1:1,3:3:9.02:92,9,0	1/1:7,7:14:26.38:252,26,0	1/1:6,6:12:17.59:203,18,0
chr10	59674799	.	G	GGCAA	612.36	PASS	AC=2;AF=0.037;AN=54;BaseQRankSum=-4.126;DP=356;FS=10.778;HRun=0;HaplotypeScore=61.5675;InbreedingCoeff=0.8087;MQ=50.54;MQ0=13;MQRankSum=0.225;QD=61.24;ReadPosRankSum=2.450;VQSLOD=4.5092;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:33.11:0,33,600	0/0:6,0:6:18.06:0,18,327	./.	0/0:6,0:3:3.01:0,3,43	0/0:7,0:5:12.04:0,12,218	0/0:8,0:8:23.81:0,24,366	0/0:14,0:13:39.12:0,39,680	0/0:25,0:23:60.20:0,60,1031	1/1:1,9:10:27.09:706,27,0	0/0:10,0:10:27.09:0,27,491	0/0:16,0:15:36.12:0,36,654	0/0:10,0:10:27:0,27,462	0/0:11,0:11:33.11:0,33,592	0/0:9,0:9:24.08:0,24,430	0/0:6,0:6:18.06:0,18,327	0/0:12,0:12:36.11:0,36,627	0/0:24,0:22:57.14:0,57,972	0/0:16,0:15:36.12:0,36,654	0/0:14,0:13:36.04:0,36,610	0/0:10,0:9:24.08:0,24,436	0/0:19,0:19:51.17:0,51,927	0/0:11,0:11:30.10:0,30,545	0/0:16,0:14:30.10:0,30,545	0/0:14,0:14:33.11:0,33,600	0/0:17,0:17:39.13:0,39,682	0/0:14,0:14:42.14:0,42,763	0/0:16,0:16:48.16:0,48,871	0/0:21,0:17:33.01:0,33,500
chr10	59676290	.	A	AAAAACAAAAC	43700.18	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-7.561;DP=739;FS=8.965;HRun=0;HaplotypeScore=162.4104;InbreedingCoeff=0.9185;MQ=56.23;MQ0=0;MQRankSum=-7.784;QD=64.08;ReadPosRankSum=3.797;VQSLOD=4.2820;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,17:28:40.90:1953,41,0	1/1:4,9:19:24.05:1077,24,0	0/0:28,0:22:54.02:0,54,1127	0/0:28,0:27:32.97:0,33,737	1/1:9,19:36:57.12:2319,57,0	1/1:10,14:30:36.12:1690,36,0	1/1:8,9:19:30.10:1497,30,0	1/1:15,3:29:45.14:1651,45,0	1/1:12,17:35:45.15:2263,45,0	1/1:11,13:28:48.15:2204,48,0	1/1:11,11:30:39.13:1846,39,0	1/1:15,9:32:15.05:754,15,0	1/1:7,5:23:18.06:899,18,0	1/1:3,11:24:30.10:1508,30,0	1/1:7,19:35:48.16:2375,48,0	1/1:11,12:31:19.57:1643,20,0	1/1:5,5:12:15.05:754,15,0	1/1:16,2:18:18.02:776,18,0	1/1:8,10:24:51.13:1893,51,0	1/1:8,19:32:63.09:2816,63,0	1/1:7,7:20:9.50:444,10,0	1/1:3,19:26:57.20:2842,57,0	1/1:10,9:25:26.43:1354,26,0	1/1:7,10:21:33.11:1364,33,0	1/1:2,12:21:30.10:1487,30,0	1/1:10,18:39:75.23:3158,75,0	1/1:10,22:35:55.43:2681,55,0	1/1:0,4:9:9.03:453,9,0
chr10	59677184	.	TTGGATGGATGGATGGATGGATGGA	T	10143.62	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=11.069;DP=772;FS=0.000;HRun=0;HaplotypeScore=427.4200;InbreedingCoeff=0.9150;MQ=63.97;MQ0=11;MQRankSum=-6.856;QD=37.99;ReadPosRankSum=0.756;VQSLOD=2.1354;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:48:82.47:0,82,5372	0/0:10,0:15:30.10:0,30,2117	0/0:44,0:31:6.02:0,6,196	0/0:23,0:20:18.04:0,18,470	0/0:19,0:25:43.03:0,43,2688	0/0:15,0:25:36.12:0,36,2211	0/0:34,0:33:42.13:0,42,2938	0/0:37,0:37:45.13:0,45,1727	0/0:37,0:36:72.23:0,72,6918	1/1:13,8:20:15.03:499,15,0	1/1:5,11:16:9.03:298,9,0	0/0:43,0:43:96.32:0,96,6877	0/0:42,0:42:84.29:0,84,6253	1/1:10,18:28:27.09:1689,27,0	1/1:11,16:27:30.10:1841,30,0	1/1:16,16:32:27.09:1689,27,0	0/0:19,0:30:45.15:0,45,2959	0/0:11,0:17:30.10:0,30,2374	1/1:11,9:19:23.98:913,24,0	1/1:12,11:23:20.91:504,21,0	1/1:16,14:30:3.01:60,3,0	0/0:29,0:29:42.13:0,42,3341	0/0:29,0:29:36.12:0,36,2267	0/0:26,0:26:35.95:0,36,2275	1/1:7,10:17:12.04:565,12,0	1/1:10,13:23:32.95:1146,33,0	1/1:10,13:23:12.51:751,13,0	1/1:5,2:7:3.01:188,3,0
chr10	59678629	.	T	TA	20182.17	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-8.669;DP=774;FS=14.898;HRun=8;HaplotypeScore=81.9962;InbreedingCoeff=0.9997;MQ=78.70;MQ0=0;MQRankSum=-8.721;QD=27.61;ReadPosRankSum=6.189;VQSLOD=3.5475;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,52:55:99:1531,111,0	1/1:0,17:17:51.15:589,51,0	0/0:23,0:23:55.93:0,56,476	0/0:20,0:20:45.02:0,45,409	1/1:4,27:31:75.18:851,75,0	1/1:1,19:20:45.13:519,45,0	1/1:7,22:29:48.14:554,48,0	1/1:4,25:29:75.20:854,75,0	1/1:5,18:23:51.15:589,51,0	1/1:8,20:28:63.17:716,63,0	1/1:5,18:23:54.12:607,54,0	1/1:5,25:30:75.22:864,75,0	1/1:1,24:25:57.14:658,57,0	1/1:3,29:32:50.80:838,51,0	1/1:3,27:30:63.19:727,63,0	1/1:4,28:32:57.07:908,57,0	1/1:6,41:47:99:1177,102,0	1/1:1,20:21:57.17:658,57,0	1/1:4,25:29:50.76:828,51,0	1/1:3,16:19:45.13:519,45,0	1/1:2,30:32:84.25:967,84,0	1/1:5,19:24:29.70:593,30,0	1/1:3,25:29:69.51:777,70,0	1/1:1,26:27:72.21:831,72,0	1/1:2,20:22:60.18:692,60,0	1/1:2,28:30:79.48:903,79,0	1/1:3,27:30:75:844,75,0	1/1:0,17:17:51.15:589,51,0
chr10	59679267	.	GCT	G	21194.42	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=7.764;DP=649;FS=0.000;HRun=0;HaplotypeScore=97.6248;InbreedingCoeff=0.9959;MQ=58.18;MQ0=8;MQRankSum=3.603;QD=37.98;ReadPosRankSum=5.084;VQSLOD=7.0737;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,36:36:99:1386,99,0	0/0:11,0:11:33.11:0,33,594	0/0:12,0:6:15.05:0,15,270	0/0:12,0:11:27.09:0,27,465	1/1:1,24:24:66.22:924,66,0	1/1:0,18:18:48.16:672,48,0	1/1:1,19:20:48.16:672,48,0	0/0:34,0:33:96.33:0,96,1716	1/1:0,23:23:63.21:882,63,0	1/1:1,28:29:81.27:1133,81,0	1/1:0,18:17:51.17:714,51,0	1/1:0,10:10:30.10:415,30,0	1/1:1,20:20:51.17:715,51,0	1/1:4,21:25:60.20:840,60,0	1/1:0,24:24:72.24:1008,72,0	1/1:0,25:25:69.23:966,69,0	0/0:22,0:22:60.21:0,60,1080	1/1:0,20:20:54.18:756,54,0	1/1:1,26:27:78.24:1060,78,0	1/1:1,25:26:72.21:987,72,0	1/1:1,31:31:87.29:1219,87,0	1/1:0,22:22:60.20:834,60,0	1/1:1,22:23:60.20:840,60,0	1/1:2,21:23:63.21:882,63,0	1/1:0,19:19:57.19:798,57,0	1/1:1,37:38:99:1515,111,0	1/1:1,35:35:96.32:1344,96,0	1/1:2,16:18:45.15:630,45,0
chr10	59680541	.	C	CAAA	5367.34	PASS	AB=0.688;AC=51;AF=0.911;AN=56;BaseQRankSum=-0.484;DP=563;FS=2.057;HRun=20;HaplotypeScore=143.5301;InbreedingCoeff=0.4741;MQ=69.26;MQ0=5;MQRankSum=-0.723;QD=11.59;ReadPosRankSum=-1.410;VQSLOD=0.3451;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:17:21:226,21,0	1/1:5,0:4:4.51:23,5,0	0/0:49,0:20:2.34:0,2,10	0/0:51,0:23:5.58:0,6,37	1/1:30,0:28:42.08:494,42,0	1/1:13,0:13:24.05:276,24,0	1/1:15,0:15:14.02:117,14,0	1/1:49,0:47:60.94:574,61,0	1/1:12,0:12:14.97:151,15,0	1/1:21,0:25:17.92:105,18,0	1/1:9,6:16:16.15:133,16,0	1/1:16,0:16:17.59:143,18,0	1/1:13,0:13:15.92:184,16,0	1/1:19,0:19:34.07:293,34,0	1/1:28,0:28:46.85:439,47,0	1/1:16,0:16:26.99:303,27,0	1/1:23,0:23:23.47:184,23,0	1/1:9,0:7:9.03:116,9,0	1/1:15,0:14:28.84:241,29,0	1/1:9,1:18:23.81:220,24,0	1/1:20,0:20:30.29:285,30,0	1/1:13,0:13:24.04:222,24,0	1/1:15,0:15:20.49:181,20,0	1/1:8,0:8:9.48:102,9,0	1/1:10,8:18:16.47:142,16,0	1/1:13,0:13:11.89:92,12,0	0/1:12,9:22:12.02:100,0,12	1/1:10,0:10:4.20:22,4,0
chr10	59681118	.	T	TC	9091.67	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-16.399;DP=707;FS=0.000;HRun=3;HaplotypeScore=67.6509;InbreedingCoeff=0.9995;MQ=81.28;MQ0=0;MQRankSum=-1.794;QD=37.57;ReadPosRankSum=3.509;VQSLOD=5.2403;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,34:34:90.30:1260,90,0	0/0:8,0:8:24.07:0,24,288	0/0:20,0:20:48.09:0,48,545	0/0:30,0:29:69.59:0,70,796	1/1:0,22:22:63.21:882,63,0	1/1:2,28:30:81.27:1134,81,0	1/1:2,14:16:39.13:546,39,0	0/0:21,0:21:54.12:0,54,632	1/1:0,24:24:69.23:966,69,0	0/0:35,0:35:99:0,99,1161	0/0:28,0:28:84.24:0,84,993	1/1:0,24:24:69.23:965,69,0	1/1:2,23:25:63.21:881,63,0	0/0:32,0:32:96.29:0,96,1151	0/0:42,0:42:99:0,123,1450	0/0:26,0:26:75.23:0,75,900	0/0:40,0:40:99:0,111,1302	1/1:0,11:11:30.10:420,30,0	0/0:26,0:26:72.22:0,72,864	0/0:27,0:27:78.23:0,78,924	0/0:29,0:29:81.23:0,81,959	1/1:0,22:22:57.19:797,57,0	1/1:0,13:13:33.07:440,33,0	1/1:1,20:21:57.19:798,57,0	0/0:20,0:20:60.18:0,60,720	0/0:28,0:28:84.25:0,84,998	0/0:40,0:39:99:0,114,1355	0/0:10,0:10:30.09:0,30,360
chr10	59683499	.	AGGCGGC	A	2969.43	PASS	AC=22;AF=0.423;AN=52;BaseQRankSum=5.757;DP=327;FS=9.868;HRun=0;HaplotypeScore=78.1701;InbreedingCoeff=0.7495;MQ=65.44;MQ0=0;MQRankSum=-8.732;QD=22.50;ReadPosRankSum=0.356;VQSLOD=2.0801;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:5:9.03:0,9,270	0/0:2,0:2:3.01:0,3,80	0/0:6,0:6:3.85:0,4,212	0/0:5,0:5:6.02:0,6,135	./.	0/0:1,0:1:3.01:0,3,101	0/0:38,0:38:72.25:0,72,2427	0/0:7,0:7:12.02:0,12,251	0/0:5,0:5:9.03:0,9,304	1/1:4,6:10:18.05:352,18,0	1/1:2,1:3:3.01:65,3,0	0/0:13,0:13:18.06:0,18,586	0/0:13,0:13:27.09:0,27,831	1/1:2,6:8:15.05:327,15,0	1/1:2,2:4:6.02:131,6,0	1/1:2,5:7:12.04:262,12,0	0/0:13,0:37:75.17:0,75,1901	0/0:24,0:24:60.19:0,60,1899	1/1:2,8:10:24.06:468,24,0	1/1:2,2:4:3.01:65,3,0	1/1:26,26:52:8.81:196,9,0	0/0:2,0:2:3.01:0,3,101	0/0:5,0:5:9.03:0,9,250	0/0:28,0:28:69.22:0,69,2233	1/1:5,3:8:6.02:131,6,0	1/1:5,7:12:21.07:442,21,0	1/1:2,12:14:33.11:719,33,0	./.
chr10	59685218	.	C	CA	10156.78	PASS	AB=0.810;AC=52;AF=0.929;AN=56;BaseQRankSum=-5.021;DP=555;FS=0.000;HRun=11;HaplotypeScore=60.3364;InbreedingCoeff=0.3019;MQ=76.11;MQ0=0;MQRankSum=0.518;QD=18.67;ReadPosRankSum=1.674;VQSLOD=5.8791;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,16:18:44.86:428,45,0	1/1:2,1:3:3.01:30,3,0	0/0:11,0:11:8.30:0,8,59	0/1:12,1:12:13.59:14,0,32	1/1:9,30:39:35.52:684,36,0	1/1:4,20:24:39.08:396,39,0	1/1:3,15:19:38.81:380,39,0	1/1:10,25:35:51.93:698,52,0	1/1:5,1:21:39.77:200,40,0	1/1:4,15:19:24.86:433,25,0	1/1:5,22:30:42.36:557,42,0	1/1:2,17:19:48.06:476,48,0	1/1:3,13:17:38.89:371,39,0	1/1:1,16:18:38.91:380,39,0	1/1:5,13:19:24.70:414,25,0	0/1:5,4:9:14.22:52,0,14	1/1:4,17:21:15.85:342,16,0	1/1:4,9:13:0.83:190,1,0	1/1:7,10:19:41.59:377,42,0	1/1:5,25:31:74.88:714,75,0	1/1:3,19:22:54.08:539,54,0	1/1:3,18:22:33.63:487,34,0	1/1:3,15:18:39.08:396,39,0	1/1:0,3:4:8.65:75,9,0	1/1:4,19:24:24.69:417,25,0	1/1:7,13:20:33.04:323,33,0	1/1:6,26:32:16.65:533,17,0	1/1:6,9:15:6.82:251,7,0
chr10	59685955	.	CT	C	5975.34	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=14.414;DP=547;FS=6.537;HRun=8;HaplotypeScore=53.1619;InbreedingCoeff=0.9985;MQ=68.11;MQ0=0;MQRankSum=-0.037;QD=22.72;ReadPosRankSum=0.911;VQSLOD=5.2376;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,22:24:63.10:608,63,0	1/1:0,13:13:36.06:348,36,0	0/0:17,0:15:23.28:0,23,249	0/0:12,0:11:26.31:0,26,226	1/1:3,27:30:75.05:712,75,0	1/1:0,21:21:54.09:521,54,0	1/1:0,13:13:33.05:319,33,0	1/1:11,24:35:69.08:660,69,0	1/1:0,15:15:33.05:319,33,0	0/0:34,0:34:93.27:0,93,1103	0/0:18,0:18:51.15:0,51,606	1/1:1,12:13:36.05:348,36,0	1/1:2,17:19:42.07:406,42,0	0/0:13,0:13:39.11:0,39,460	0/0:15,0:15:42.12:0,42,498	0/0:16,0:16:48.13:0,48,560	1/1:3,25:28:66.11:637,66,0	1/1:1,8:9:24.04:231,24,0	0/0:24,0:24:54.17:0,54,652	0/0:26,0:26:72.22:0,72,868	0/0:16,0:16:42.11:0,42,495	1/1:3,12:15:36.06:348,36,0	1/1:3,14:18:32.97:317,33,0	1/1:2,8:10:21.03:203,21,0	0/0:23,0:23:69.21:0,69,833	0/0:26,0:26:72.21:0,72,859	0/0:18,0:18:54.17:0,54,652	0/0:24,1:25:43.27:0,43,805
chr10	59691038	.	TCTTGTGC	T	2903.84	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.546;DP=716;FS=3.645;HRun=0;HaplotypeScore=162.9776;InbreedingCoeff=0.9995;MQ=90.01;MQ0=0;MQRankSum=-9.034;QD=46.09;ReadPosRankSum=-1.150;VQSLOD=3.4955;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,126,4711	1/1:1,10:11:27.09:665,27,0	0/0:28,0:28:75.14:0,75,2487	0/0:29,0:29:78.22:0,78,2759	0/0:23,0:23:60.21:0,60,2289	0/0:15,0:15:42.14:0,42,1521	0/0:28,0:28:69.24:0,69,2631	1/1:9,23:32:69.22:1568,69,0	0/0:33,0:33:99:0,99,3825	0/0:27,0:27:72.24:0,72,2526	0/0:20,0:20:54.14:0,54,1716	0/0:29,0:29:84.29:0,84,3239	0/0:25,0:25:72.25:0,72,2658	0/0:28,0:28:81.28:0,81,3126	0/0:22,0:22:63.22:0,63,2387	0/0:26,0:26:75.26:0,75,2849	1/1:4,16:20:33.11:813,33,0	0/0:24,0:24:60.21:0,60,2318	0/0:25,0:25:60.19:0,60,2169	0/0:18,0:18:48.16:0,48,1851	0/0:46,0:46:99:0,126,4830	0/0:24,0:24:60.20:0,60,2085	0/0:21,0:21:48.16:0,48,1776	0/0:30,0:30:78.27:0,78,2932	0/0:25,0:25:69.24:0,69,2615	0/0:24,0:24:57.20:0,57,2076	0/0:23,0:23:63.22:0,63,2406	0/0:13,0:13:36.12:0,36,1373
chr10	59691132	.	A	AT	10538.53	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-17.620;DP=740;FS=6.233;HRun=6;HaplotypeScore=69.8943;InbreedingCoeff=0.9994;MQ=86.95;MQ0=0;MQRankSum=-9.359;QD=33.04;ReadPosRankSum=2.056;VQSLOD=5.1696;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,54:54:99:1962,156,0	0/0:8,0:8:21.05:0,21,214	0/0:24,0:25:58.63:0,59,561	0/0:27,0:27:81.17:0,81,816	1/1:2,24:26:66.17:805,66,0	1/1:1,27:28:72.23:906,72,0	1/1:4,23:27:63.20:793,63,0	0/0:29,0:29:72.16:0,72,735	1/1:1,25:26:72.23:906,72,0	0/0:25,0:25:69.15:0,69,704	0/0:21,0:21:63.13:0,63,637	1/1:2,37:40:99:1394,111,0	1/1:3,21:24:63.20:793,63,0	0/0:17,0:17:42.08:0,42,422	0/0:31,0:31:87.20:0,87,888	0/0:28,0:28:84.18:0,84,851	0/0:29,0:29:72.16:0,72,735	1/1:2,17:19:51.16:642,51,0	0/0:23,0:23:57.10:0,57,564	0/0:30,0:30:78.17:0,78,796	0/0:37,0:37:99:0,102,1040	1/1:1,23:24:57.18:717,57,0	1/1:1,28:29:78.25:981,78,0	1/1:3,19:22:51.16:642,51,0	0/0:22,0:22:63.14:0,63,643	0/0:28,0:28:81.16:0,81,815	0/0:25,0:25:69.15:0,69,703	0/0:16,0:16:45.09:0,45,454
chr10	59694241	.	A	AGCGC	784.11	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-2.870;DP=373;FS=7.277;HRun=0;HaplotypeScore=95.1963;InbreedingCoeff=0.7827;MQ=60.88;MQ0=8;MQRankSum=-0.267;QD=19.12;ReadPosRankSum=-0.001;VQSLOD=2.7855;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:17:0,17,135	1/1:3,0:3:6.02:88,6,0	0/0:30,0:20:50.64:0,51,770	0/0:24,0:13:33.10:0,33,541	0/0:8,0:8:17.62:0,18,146	0/0:12,0:12:9.42:0,9,59	0/0:14,0:14:11.13:0,11,83	1/1:19,0:19:46.32:617,46,0	0/0:11,0:11:12.17:0,12,91	0/0:15,0:15:42.13:0,42,696	0/0:6,0:6:15.03:0,15,206	0/0:13,0:13:14.80:0,15,127	0/0:12,0:11:19.38:0,19,125	0/0:11,0:11:24.08:0,24,386	0/0:12,0:12:23.60:0,24,307	0/0:12,0:12:20.79:0,21,319	1/1:5,10:19:9.03:207,9,0	0/0:11,0:11:20.47:0,20,135	0/0:10,0:10:24.93:0,25,386	0/0:11,0:11:24.03:0,24,335	0/0:8,0:8:15.01:0,15,211	0/0:11,0:10:14.29:0,14,89	0/0:12,0:12:9.04:0,9,58	0/0:19,0:19:3.62:0,4,15	0/0:11,0:11:21.02:0,21,276	0/0:11,0:11:23.54:0,24,339	0/0:16,0:16:36.05:0,36,514	0/0:4,0:4:9.01:0,9,121
chr10	59694242	.	G	GCA	551.89	PASS	AB=0.864;AC=19;AF=0.380;AN=50;BaseQRankSum=-4.780;DP=387;FS=3.649;HRun=0;HaplotypeScore=84.7590;InbreedingCoeff=0.2148;MQ=60.51;MQ0=10;MQRankSum=3.774;QD=3.29;ReadPosRankSum=0.627;VQSLOD=2.1167;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:29:7.75:0,8,41	0/0:3,0:3:2.99:0,3,24	./.	./.	0/0:4,0:8:11.36:0,11,56	0/0:11,0:13:5.59:0,6,26	0/0:12,0:13:2.84:0,3,14	./.	0/0:8,0:11:8.48:0,8,40	1/1:16,0:16:6.48:56,6,0	0/1:8,1:9:22.78:67,0,23	0/0:6,0:12:12.61:0,13,59	0/0:9,0:11:8.17:0,8,39	0/0:11,0:12:5.63:0,6,46	0/1:9,5:16:22.78:79,0,23	0/1:8,4:14:19.77:119,0,20	1/1:15,0:15:5.50:39,6,0	0/0:11,0:12:1:0,1,12	1/1:10,0:10:3:26,3,0	1/1:8,4:12:6.02:88,6,0	0/1:10,0:9:0:0,0,0	0/0:8,0:10:10.66:0,11,47	0/0:4,0:12:6.52:0,7,30	0/1:19,0:19:0.02:0,0,0	1/1:7,5:14:6.02:88,6,0	0/1:11,0:11:21.32:36,0,21	0/1:12,3:18:50.32:75,0,50	1/1:4,0:4:2.99:24,3,0
chr10	59698624	.	GC	G	1301.38	PASS	AB=0.944;AC=9;AF=0.161;AN=56;BaseQRankSum=6.747;DP=644;FS=2.975;HRun=3;HaplotypeScore=44.1484;InbreedingCoeff=0.7623;MQ=42.31;MQ0=125;MQRankSum=2.052;QD=16.07;ReadPosRankSum=1.598;VQSLOD=3.2215;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,12:11:24.07:297,24,0	0/0:9,0:9:21.07:0,21,302	0/0:5,0:2:3.01:0,3,43	0/0:12,0:2:3.01:0,3,39	1/1:0,24:23:60.19:744,60,0	0/0:34,0:28:51.17:0,51,734	0/0:15,0:12:33.07:0,33,447	0/0:52,0:18:51.13:0,51,705	1/1:1,14:12:27.08:334,27,0	0/0:32,0:25:69.23:0,69,992	0/0:21,0:18:30.10:0,30,432	0/0:23,0:21:51.17:0,51,733	0/0:23,0:21:39.13:0,39,559	0/0:15,0:13:24.08:0,24,345	0/0:18,0:17:33.11:0,33,474	0/1:16,1:16:7.02:7,0,358	0/0:20,0:17:48.14:0,48,674	1/1:1,5:5:6.02:74,6,0	0/0:84,0:8:24.08:0,24,346	0/0:21,0:20:33.11:0,33,475	0/0:19,0:17:15.05:0,15,216	0/0:33,0:32:63.21:0,63,893	0/0:30,0:27:48.16:0,48,689	0/0:12,0:10:9.03:0,9,129	0/0:16,0:15:30.10:0,30,431	0/0:22,0:18:45.14:0,45,629	0/0:34,0:30:66.06:0,66,903	0/0:13,0:10:30.07:0,30,395
chr10	59700037	.	G	GT	3526.47	PASS	AB=0.732;AC=21;AF=0.375;AN=56;BaseQRankSum=6.045;DP=609;FS=1.322;HRun=10;HaplotypeScore=62.4926;InbreedingCoeff=0.7649;MQ=52.17;MQ0=5;MQRankSum=1.074;QD=13.94;ReadPosRankSum=2.449;VQSLOD=3.8290;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,20:24:42.11:447,42,0	0/0:18,0:18:29.90:0,30,240	0/0:9,0:6:17.95:0,18,143	0/0:12,0:6:12.43:0,12,95	1/1:4,32:35:44.90:437,45,0	0/1:5,13:19:16.36:237,0,16	1/1:2,12:12:33.08:352,33,0	0/0:41,1:37:94.86:0,95,765	1/1:1,19:20:38.94:415,39,0	0/0:39,0:38:89.84:0,90,738	0/0:33,0:32:26.97:0,27,221	1/1:3,21:24:42.11:448,42,0	1/1:5,13:17:8.27:278,8,0	0/0:13,0:14:25.99:0,26,203	0/0:25,0:25:47.92:0,48,394	0/0:18,0:18:44.93:0,45,369	0/0:22,0:22:55.95:0,56,448	0/1:3,2:5:12.46:72,0,12	0/0:18,0:16:38.90:0,39,316	0/1:34,4:36:9.71:10,0,340	0/0:11,0:11:20.95:0,21,172	1/1:5,9:14:18.05:192,18,0	1/1:5,15:19:18.05:192,18,0	1/1:1,17:18:42.11:448,42,0	0/0:14,0:14:20.96:0,21,172	0/0:25,0:25:47.89:0,48,394	0/0:36,2:38:51.88:0,52,633	0/0:16,0:16:29.96:0,30,246
chr10	59703803	.	CG	C	10144.95	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=12.647;DP=568;FS=0.659;HRun=2;HaplotypeScore=64.6576;InbreedingCoeff=0.9954;MQ=74.22;MQ0=0;MQRankSum=-0.730;QD=34.98;ReadPosRankSum=3.079;VQSLOD=5.2192;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,44:44:99:1595,123,0	1/1:0,4:4:12.04:156,12,0	0/0:13,0:13:35.74:0,36,514	0/0:9,0:9:24.07:0,24,330	1/1:1,21:22:57.19:739,57,0	1/1:0,20:20:60.19:778,60,0	1/1:1,15:16:33.11:428,33,0	1/1:1,27:28:81.26:1048,81,0	1/1:0,22:22:57.19:739,57,0	0/0:20,0:20:54.16:0,54,764	0/0:16,0:16:45.12:0,45,649	1/1:0,16:16:39.13:504,39,0	1/1:0,19:19:54.18:698,54,0	0/0:25,0:25:72.24:0,72,1075	0/0:22,0:22:66.22:0,66,985	0/0:25,0:25:72.23:0,72,1058	1/1:0,27:27:69.22:895,69,0	1/1:1,20:21:57.18:738,57,0	0/0:23,0:23:69.21:0,69,990	0/0:18,0:18:48.14:0,48,678	0/0:26,0:26:72.18:0,72,1030	1/1:1,20:21:60.19:777,60,0	1/1:0,17:17:45.15:583,45,0	1/1:0,13:13:36.12:467,36,0	0/0:25,0:25:63.01:0,63,894	0/0:23,0:23:69.23:0,69,1014	0/0:16,0:16:45.15:0,45,673	0/0:17,0:17:48.02:0,48,623
chr10	59703984	.	G	GC	904.41	PASS	AB=0.792;AC=19;AF=0.339;AN=56;BaseQRankSum=-1.210;DP=389;FS=10.239;HRun=11;HaplotypeScore=54.5485;InbreedingCoeff=0.0214;MQ=80.73;MQ0=0;MQRankSum=-0.471;QD=4.86;ReadPosRankSum=-1.894;VQSLOD=0.1093;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:17,0:17:8.53:14,0,9	1/1:3,1:4:6.01:59,6,0	0/1:17,0:17:10.74:11,0,27	0/1:13,0:14:14.85:52,0,15	1/1:14,0:14:2.56:19,3,0	0/1:11,3:14:45.73:46,0,55	1/1:7,11:19:5.98:272,6,0	0/1:7,5:12:8.25:96,0,8	1/1:8,0:8:2.96:19,3,0	0/0:9,1:11:10.97:0,11,75	0/0:9,0:10:13.95:0,14,96	0/1:2,7:9:31.27:75,0,31	0/1:3,9:12:25.14:131,0,25	0/0:14,0:14:17.84:0,18,139	0/0:21,0:25:48.24:0,48,344	0/0:21,0:23:51.84:0,52,383	0/1:5,3:8:51.56:73,0,52	0/1:8,0:8:2.83:36,0,3	0/0:13,0:15:13.90:0,14,83	0/0:16,0:17:0.22:0,0,100	0/0:21,0:23:38.21:0,38,247	0/0:7,6:13:2.94:0,3,23	0/1:4,5:9:13.95:45,0,14	0/1:11,10:21:99:117,0,127	0/0:8,0:9:8.92:0,9,70	0/0:17,0:17:23.83:0,24,182	0/0:12,0:13:34.90:0,35,261	0/0:9,0:12:13.01:0,13,81
chr10	59708636	.	AAC	A	2173.55	PASS	AB=0.978;AC=30;AF=0.536;AN=56;BaseQRankSum=8.026;DP=558;FS=17.596;HRun=0;HaplotypeScore=73.4257;InbreedingCoeff=0.7636;MQ=53.74;MQ0=23;MQRankSum=-2.815;QD=8.26;ReadPosRankSum=-4.127;VQSLOD=0.9763;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,1:14:26.34:215,26,0	1/1:5,1:3:5.81:41,6,0	0/0:30,0:9:10.04:0,10,152	0/1:25,0:10:13.82:14,0,62	1/1:20,2:19:43.85:324,44,0	1/1:16,3:17:33.82:283,34,0	1/1:10,0:9:21.95:153,22,0	1/1:38,1:32:48.80:399,49,0	1/1:12,1:12:5.05:40,5,0	0/0:32,0:28:51.03:0,51,640	0/0:28,0:27:21.16:0,21,502	1/1:12,0:12:24.97:139,25,0	1/1:10,1:11:5.96:44,6,0	0/0:21,0:21:38.81:0,39,371	0/0:28,0:27:51.52:0,52,579	0/0:20,0:20:7.87:0,8,355	1/1:21,0:20:14.21:185,14,0	1/1:9,0:7:16.53:135,17,0	0/0:26,0:21:13.63:0,14,388	0/0:33,0:30:57.16:0,57,710	0/0:13,0:13:15.49:0,15,194	1/1:16,1:16:13.39:98,13,0	1/1:14,2:15:32.18:241,32,0	1/1:6,0:6:6.85:54,7,0	0/0:15,0:15:10.06:0,10,234	0/1:21,1:20:23.72:24,0,384	0/0:39,0:36:76.68:0,77,612	0/0:10,0:10:18.76:0,19,150
chr10	59709328	.	C	CTCTCTCTT	8676.05	PASS	AB=0.992;AC=39;AF=0.696;AN=56;BaseQRankSum=-0.781;DP=497;FS=1.725;HRun=0;HaplotypeScore=117.5648;InbreedingCoeff=-0.1820;MQ=45.74;MQ0=19;MQRankSum=-4.372;QD=19.72;ReadPosRankSum=-0.939;VQSLOD=4.2942;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:20,0:18:84.30:189,0,84	0/1:9,0:8:12.51:13,0,49	0/0:24,0:11:14.95:0,15,190	0/0:29,0:5:2.90:0,3,25	1/1:17,0:16:3.31:94,3,0	0/1:18,0:18:99:207,0,127	0/1:22,0:21:99:197,0,134	0/1:26,0:21:99:231,0,172	0/1:17,0:18:63.50:530,0,64	1/1:16,0:14:37.15:647,37,0	1/1:3,5:9:3.01:49,3,0	0/1:18,0:19:55.66:703,0,56	0/1:15,0:14:71.24:360,0,71	1/1:1,9:13:6.02:227,6,0	1/1:14,0:16:44.90:892,45,0	1/1:2,11:15:9.03:265,9,0	0/1:18,0:16:8:8,0,370	0/1:5,0:5:52.79:86,0,53	1/1:3,0:13:35.99:532,36,0	1/1:1,11:18:9:284,9,0	1/1:10,0:10:14.96:174,15,0	0/1:20,0:17:33.24:156,0,33	0/1:21,0:18:25.04:349,0,25	0/1:16,0:16:97.15:162,0,97	1/1:12,0:11:20.93:289,21,0	1/1:3,0:21:58.94:880,59,0	1/1:25,1:24:60.45:1001,60,0	1/1:7,8:15:5.99:152,6,0
chr10	59709329	.	T	TCTCTC	3162.82	PASS	AB=0.939;AC=24;AF=0.444;AN=54;BaseQRankSum=-1.018;DP=447;FS=22.987;HRun=0;HaplotypeScore=87.9923;InbreedingCoeff=-0.4372;MQ=46.23;MQ0=20;MQRankSum=-3.662;QD=9.88;ReadPosRankSum=-1.713;VQSLOD=0.3804;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:19,0:17:97.82:98,0,171	0/0:9,0:8:12.04:0,12,207	0/0:25,0:11:30.12:0,30,292	0/0:30,0:4:2.84:0,3,35	0/1:17,0:16:47.11:81,0,47	0/1:15,0:15:99:168,0,227	0/1:22,0:20:99:167,0,216	0/0:26,0:21:63.08:0,63,768	0/1:17,0:17:99:460,0,107	0/1:16,0:13:28.34:216,0,28	./.	0/1:11,0:11:99:115,0,124	0/1:12,0:11:72.44:72,0,178	1/1:11,0:12:6.02:131,6,0	0/1:13,2:14:99:280,0,108	1/1:13,0:12:6.02:143,6,0	0/0:18,0:16:45.10:0,45,831	0/1:5,0:5:42.56:43,0,90	0/1:11,1:11:99:127,0,207	0/1:14,0:14:14.65:134,0,15	0/1:5,1:9:23.83:24,0,42	0/1:17,0:14:63.50:128,0,64	0/1:13,0:15:81.61:82,0,85	0/0:10,0:12:23.82:0,24,227	0/1:8,3:11:73.14:73,0,99	0/1:18,2:20:99:315,0,186	0/1:24,1:23:99:385,0,201	1/1:18,0:14:2.80:81,3,0
chr10	59710152	.	GCACA	G	189.51	PASS	AB=0.957;AC=11;AF=0.306;AN=36;BaseQRankSum=2.544;DP=458;FS=16.239;HRun=0;HaplotypeScore=76.6258;InbreedingCoeff=0.4397;MQ=62.41;MQ0=10;MQRankSum=-1.441;QD=2.13;ReadPosRankSum=1.655;VQSLOD=0.4671;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:26:18.06:0,18,354	1/1:4,0:7:9.01:83,9,0	./.	./.	0/0:11,0:11:9.03:0,9,201	0/0:15,0:15:15.05:0,15,219	0/0:26,0:24:5.59:0,6,106	./.	1/1:17,1:20:3:46,3,0	0/0:14,0:14:0.47:0,0,1	./.	0/0:17,0:17:8.98:0,9,158	0/0:9,0:9:9.03:0,9,143	./.	1/1:9,3:12:6.02:91,6,0	./.	0/1:21,0:22:14.01:22,0,14	0/0:8,0:8:3.01:0,3,42	./.	./.	0/0:37,0:36:3.01:0,3,40	0/0:15,0:14:2.54:0,3,63	0/0:17,0:17:3.01:0,3,53	0/0:22,0:20:15.05:0,15,255	1/1:10,0:11:2.99:23,3,0	./.	1/1:16,1:17:3.01:45,3,0	./.
chr10	59712698	.	AAAAAAG	A	5905.25	PASS	AB=0.750;AC=25;AF=0.463;AN=54;BaseQRankSum=5.742;DP=481;FS=0.000;HRun=0;HaplotypeScore=123.9701;InbreedingCoeff=0.8836;MQ=62.36;MQ0=2;MQRankSum=-11.629;QD=30.92;ReadPosRankSum=0.541;VQSLOD=4.4684;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,15:20:23.07:561,23,0	1/1:2,5:6:15.05:315,15,0	0/0:25,0:21:36.56:0,37,763	0/0:11,0:10:14.41:0,14,320	1/1:7,19:25:42.10:784,42,0	1/1:1,13:14:24.08:506,24,0	1/1:5,13:18:27.09:569,27,0	./.	1/1:1,8:9:18.06:379,18,0	0/0:24,0:24:51.17:0,51,1614	0/0:28,0:28:66.23:0,66,2118	1/1:3,12:15:27.09:568,27,0	1/1:7,16:22:30.10:632,30,0	0/0:13,0:13:30.08:0,30,849	0/0:27,0:27:48.15:0,48,1514	0/0:17,0:17:33.11:0,33,1044	1/1:9,0:8:9.03:180,9,0	0/1:4,2:6:43.98:54,0,44	0/0:11,0:10:18.06:0,18,553	0/0:38,0:38:87.30:0,87,2830	0/0:14,0:14:36.12:0,36,1114	1/1:9,11:20:30.10:603,30,0	1/1:3,13:16:31.35:692,31,0	1/1:5,3:8:3.01:62,3,0	0/0:20,0:20:42.14:0,42,1371	0/0:23,0:23:45.15:0,45,1454	0/0:20,0:20:45.14:0,45,1366	0/0:17,0:17:48.16:0,48,1581
chr10	59712854	.	AGAACC	A	213.32	PASS	AB=0.970;AC=9;AF=0.167;AN=54;BaseQRankSum=-1.423;DP=410;FS=3.316;HRun=0;HaplotypeScore=82.9431;InbreedingCoeff=-0.0773;MQ=38.01;MQ0=11;MQRankSum=-0.764;QD=2.22;ReadPosRankSum=-3.116;VQSLOD=0.9677;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:16,0:15:21.50:22,0,727	0/0:13,0:12:12.36:0,12,442	1/1:3,0:1:1.55:4,2,0	./.	0/0:32,0:32:21.13:0,21,972	0/0:16,0:16:45.15:0,45,1061	0/1:12,0:11:8.35:8,0,321	0/0:20,1:19:24.32:0,24,687	0/0:11,1:9:7.03:0,7,216	0/0:24,1:25:6.89:0,7,1063	0/0:21,1:22:13.59:0,14,749	0/1:9,0:9:5.61:6,0,387	0/0:7,0:6:11.88:0,12,121	0/1:9,0:9:44.90:45,0,263	0/0:11,0:11:17.53:0,18,254	0/0:12,0:12:33.02:0,33,657	0/0:23,1:24:25.08:0,25,838	0/1:11,0:10:91.25:91,0,230	0/1:11,4:15:99:134,0,565	0/0:22,0:23:8.02:0,8,881	0/0:7,0:7:0.02:0,0,277	0/0:12,0:10:27.06:0,27,412	0/0:18,0:17:19.34:0,19,583	0/0:13,0:12:20.95:0,21,433	0/0:14,0:14:27.45:0,27,524	0/0:12,0:11:33.07:0,33,657	0/1:21,0:21:28.27:28,0,847	0/0:17,0:15:41.88:0,42,575
chr10	59717290	.	CT	C	4736.01	PASS	AB=0.875;AC=25;AF=0.446;AN=56;BaseQRankSum=9.136;DP=624;FS=4.995;HRun=12;HaplotypeScore=69.5564;InbreedingCoeff=0.8897;MQ=73.48;MQ0=2;MQRankSum=-0.831;QD=16.85;ReadPosRankSum=2.403;VQSLOD=6.1797;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:90.13:0,90,887	0/0:7,0:7:15.03:0,15,152	0/0:24,0:19:5.18:0,5,155	0/0:17,0:13:17.48:0,17,166	0/0:38,1:39:81.33:0,81,984	0/0:20,0:21:56.88:0,57,550	0/0:14,0:14:38.10:0,38,366	0/0:41,1:42:75.94:0,76,941	0/0:22,0:22:47.98:0,48,463	1/1:4,20:24:59.74:463,60,0	1/1:3,19:22:53.77:418,54,0	0/0:16,0:16:39.06:0,39,389	0/0:22,0:22:60.10:0,60,600	1/1:3,17:19:41.83:325,42,0	1/1:5,17:22:41.84:325,42,0	1/1:3,15:18:39.73:304,40,0	0/0:35,0:36:83.32:0,83,872	0/1:12,2:14:7.42:7,0,289	1/1:3,21:23:62.74:485,63,0	1/1:4,24:28:71.71:557,72,0	1/1:4,9:13:26.89:209,27,0	0/0:20,0:20:51.10:0,51,518	0/0:23,0:23:51.98:0,52,477	0/0:9,0:9:15.03:0,15,152	1/1:1,20:21:56.78:441,57,0	1/1:8,23:32:70.74:540,71,0	1/1:5,21:26:36.86:461,37,0	1/1:4,13:17:2.44:202,2,0
chr10	59719122	.	ATCCTTT	A	1357.69	PASS	AB=0.785;AC=8;AF=0.143;AN=56;BaseQRankSum=8.037;DP=496;FS=31.202;HRun=0;HaplotypeScore=112.7750;InbreedingCoeff=-0.1668;MQ=71.31;MQ0=0;MQRankSum=-6.854;QD=11.31;ReadPosRankSum=1.063;VQSLOD=1.1222;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:99:0,99,3527	0/0:10,0:10:30.10:0,30,1063	0/0:25,0:24:66.22:0,66,1871	0/0:17,0:17:40.46:0,40,1275	0/0:27,0:27:78.27:0,78,2780	0/0:23,0:23:69.24:0,69,2503	0/0:17,0:17:51.18:0,51,1858	0/0:27,0:27:81.27:0,81,2779	0/0:13,0:13:39.12:0,39,1330	0/1:12,5:17:99:333,0,1139	0/1:17,5:20:99:128,0,1713	0/0:17,0:17:51.16:0,51,1706	0/0:16,0:16:48.16:0,48,1725	0/0:13,0:13:36.12:0,36,1296	0/1:5,2:7:21.68:22,0,520	0/0:8,0:8:24.08:0,24,829	0/0:21,0:21:63.22:0,63,2286	0/0:34,0:34:99:0,102,3570	0/0:13,0:13:39.13:0,39,1352	0/1:15,6:21:99:376,0,1559	0/0:7,0:7:21.07:0,21,756	0/0:19,0:19:57.18:0,57,1874	0/0:19,0:19:57.20:0,57,2070	0/0:16,0:16:48.16:0,48,1671	0/1:10,4:14:99:246,0,983	0/1:11,3:14:99:190,0,1006	0/1:18,2:20:91.17:91,0,1885	0/1:2,3:5:99:109,0,144
chr10	59726460	.	GT	G	2862.76	PASS	AB=0.818;AC=26;AF=0.464;AN=56;BaseQRankSum=3.540;DP=519;FS=0.000;HRun=12;HaplotypeScore=85.5063;InbreedingCoeff=0.6057;MQ=81.54;MQ0=0;MQRankSum=-1.118;QD=10.15;ReadPosRankSum=3.853;VQSLOD=3.1521;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:54.81:0,55,701	0/0:8,0:8:21.04:0,21,209	0/0:28,1:24:34.61:0,35,285	0/0:28,0:22:1.80:0,2,100	0/1:20,5:25:15.61:16,0,397	0/0:5,0:17:28.72:0,29,167	0/1:4,1:10:1.77:2,0,78	0/0:24,0:24:48.06:0,48,468	0/1:13,2:16:4.62:5,0,284	1/1:3,17:22:51.87:383,52,0	1/1:0,17:19:42.41:329,42,0	0/0:3,0:16:30.39:0,30,164	0/0:3,0:12:14.33:0,14,77	1/1:8,11:19:26.88:209,27,0	1/1:2,11:14:22.94:168,23,0	1/1:5,11:16:8.40:248,8,0	0/0:18,0:18:45.04:0,45,427	0/0:13,0:13:27.04:0,27,267	0/1:2,4:7:4.62:78,0,5	1/1:7,23:30:23.39:422,23,0	1/1:4,5:9:11.94:93,12,0	0/1:5,0:15:5.11:5,0,71	0/0:2,0:20:37.53:0,38,192	0/0:1,0:19:36.93:0,37,185	1/1:3,15:20:16.82:264,17,0	1/1:2,13:19:46.98:324,47,0	0/1:13,17:29:18.68:314,0,19	1/1:2,9:11:26.89:209,27,0
chr10	59730289	.	T	TTCTCTC	2833.84	PASS	AB=0.846;AC=46;AF=0.958;AN=48;BaseQRankSum=-0.300;DP=505;FS=3.054;HRun=0;HaplotypeScore=141.3261;InbreedingCoeff=-0.0214;MQ=46.73;MQ0=8;MQRankSum=-0.322;QD=6.33;ReadPosRankSum=-0.522;VQSLOD=2.6085;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:21,0:19:23.45:51,0,23	1/1:3,9:13:3.41:55,3,0	./.	./.	1/1:19,0:22:3.01:59,3,0	1/1:28,0:25:3:26,3,0	1/1:28,0:26:2.16:5,2,0	1/1:29,0:29:18.31:133,18,0	1/1:9,0:10:8.99:134,9,0	1/1:19,0:18:11.99:132,12,0	./.	1/1:21,0:21:15.89:217,16,0	1/1:19,0:19:17.80:153,18,0	1/1:11,0:12:9.03:149,9,0	1/1:20,0:21:7.27:151,7,0	1/1:11,0:11:6.02:86,6,0	0/1:10,8:18:13.25:50,0,13	1/1:9,0:8:11.97:150,12,0	1/1:22,0:21:26.49:233,26,0	1/1:15,0:16:2.04:6,2,0	./.	1/1:22,0:23:3:25,3,0	1/1:22,0:23:5.98:92,6,0	1/1:15,0:15:10.54:79,11,0	1/1:14,0:14:3.01:76,3,0	1/1:16,0:17:32.91:339,33,0	1/1:20,0:20:21.54:409,22,0	1/1:13,0:10:12.01:120,12,0
chr10	59730315	.	C	CTGTGTGTGTG	1072.03	PASS	AB=1.000;AC=13;AF=0.250;AN=52;BaseQRankSum=5.238;DP=460;FS=0.832;HRun=0;HaplotypeScore=175.9213;InbreedingCoeff=-0.0292;MQ=39.17;MQ0=12;MQRankSum=-3.703;QD=7.05;ReadPosRankSum=1.018;VQSLOD=2.5619;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:19:5.72:0,6,82	0/1:16,0:16:18.80:19,0,72	./.	./.	0/0:22,0:21:11.74:0,12,182	0/0:27,0:24:32.83:0,33,857	0/0:24,0:21:9.17:0,9,346	0/0:30,0:29:66.44:0,66,1000	0/1:11,0:10:29.10:29,0,165	0/1:13,0:11:99:164,0,258	0/0:11,0:10:2.76:0,3,75	0/1:19,0:18:12.45:12,0,417	0/0:23,0:22:33.82:0,34,966	0/1:12,0:11:80.57:139,0,81	0/0:25,0:25:17.54:0,18,198	0/1:13,0:13:83.64:133,0,84	0/1:15,0:14:37.80:38,0,243	0/0:11,0:10:26.96:0,27,343	0/1:17,0:16:2.40:2,0,444	0/0:7,4:13:6.84:0,7,69	1/1:9,0:6:2.98:22,3,0	0/0:23,0:22:15.04:0,15,351	0/0:22,0:21:26.98:0,27,637	0/0:17,0:17:26.77:0,27,745	0/0:14,0:13:2.66:0,3,21	0/1:18,0:18:99:177,0,575	0/0:17,0:17:15.41:0,15,310	1/1:9,0:7:12.04:482,12,0
chr10	59730319	.	C	CTGTGTGTGTGTGTG	1980.43	PASS	AB=0.979;AC=16;AF=0.308;AN=52;BaseQRankSum=1.536;DP=446;FS=2.596;HRun=0;HaplotypeScore=191.1178;InbreedingCoeff=-0.1348;MQ=38.48;MQ0=10;MQRankSum=-3.101;QD=9.43;ReadPosRankSum=-0.973;VQSLOD=2.5201;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:19:16:19,0,16	0/1:15,0:15:27.17:99,0,27	./.	./.	0/0:22,0:21:11.78:0,12,174	0/0:26,0:23:26.26:0,26,918	0/1:25,0:22:3.99:4,0,370	0/1:27,0:26:91.61:92,0,183	0/1:11,0:10:17.14:17,0,106	0/1:13,0:11:84.72:321,0,85	0/0:9,0:11:2.74:0,3,25	0/0:18,0:17:23.03:0,23,590	0/0:23,0:22:37.52:0,38,1083	0/1:8,2:9:15.94:183,0,16	0/0:24,0:24:9.70:0,10,72	0/1:10,1:11:18.96:188,0,19	0/1:15,0:14:92.69:93,0,138	0/1:11,0:10:3.35:3,0,136	0/1:16,0:15:33.94:34,0,192	0/0:13,0:13:0:0,0,0	1/1:9,0:6:3.01:66,3,0	0/0:25,0:24:21.04:0,21,519	0/0:22,0:21:23.93:0,24,723	0/0:16,0:16:26.49:0,26,880	0/0:13,0:12:2.75:0,3,44	0/1:18,0:18:99:303,0,202	0/0:17,0:17:14.43:0,14,183	1/1:6,1:7:12.04:708,12,0
chr10	59730321	.	C	CTGTGTGTGTGTGTGTG	4681.96	PASS	AB=0.970;AC=31;AF=0.596;AN=52;BaseQRankSum=1.176;DP=473;FS=16.845;HRun=0;HaplotypeScore=214.2833;InbreedingCoeff=0.3753;MQ=38.07;MQ0=8;MQRankSum=-5.927;QD=14.41;ReadPosRankSum=-2.987;VQSLOD=1.5735;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:20:2.91:49,3,0	1/1:14,0:14:11.44:171,11,0	./.	./.	0/1:22,0:22:14.04:14,0,129	0/0:24,0:21:23.57:0,24,945	0/0:22,0:21:7.58:0,8,393	1/1:27,0:26:15.28:465,15,0	0/1:13,0:12:54.41:55,0,54	1/1:16,0:13:18.94:618,19,0	0/1:14,0:13:0:0,0,0	0/1:18,0:17:99:106,0,533	0/0:22,0:21:27.01:0,27,1040	1/1:11,0:10:6.02:209,6,0	1/1:19,0:26:2.94:18,3,0	1/1:9,0:15:11.18:431,11,0	0/1:15,0:14:43.93:200,0,44	0/1:12,0:11:38.17:38,0,80	1/1:17,0:18:12.02:203,12,0	0/0:12,0:12:0:0,0,0	1/1:12,0:9:3.01:88,3,0	0/0:26,0:25:24.07:0,24,646	0/0:21,0:20:21.05:0,21,720	0/0:15,0:15:23.45:0,23,929	0/1:11,0:14:0:0,0,0	1/1:20,2:26:38.87:1126,39,0	1/1:16,1:18:5.96:49,6,0	1/1:2,3:9:9.89:841,10,0
chr10	59732456	.	G	GA	775.30	PASS	AB=0.854;AC=9;AF=0.161;AN=56;BaseQRankSum=10.494;DP=582;FS=7.348;HRun=10;HaplotypeScore=85.8776;InbreedingCoeff=-0.2525;MQ=52.44;MQ0=1;MQRankSum=-8.134;QD=3.73;ReadPosRankSum=-4.115;VQSLOD=-0.5660;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:73.14:0,73,937	0/0:11,0:11:27.08:0,27,319	0/0:18,0:3:9.02:0,9,104	0/0:14,0:6:12.10:0,12,122	0/0:30,0:29:9.88:0,10,477	0/1:18,5:23:99:125,0,531	0/1:18,2:20:8.09:8,0,538	0/0:32,0:32:84.15:0,84,973	0/0:17,0:17:11.39:0,11,304	0/0:21,0:21:52.89:0,53,680	0/0:15,0:15:32.75:0,33,338	0/1:14,8:22:99:222,0,411	0/1:17,6:23:99:160,0,489	0/1:24,7:31:99:208,0,646	0/0:20,0:20:1.67:0,2,439	0/0:21,0:21:27.36:0,27,500	0/0:19,0:19:42.08:0,42,502	0/1:19,4:23:64.03:64,0,496	0/0:19,1:19:7.16:0,7,514	0/0:24,0:24:21.41:0,21,458	0/0:3,1:3:0.41:0,0,33	0/0:15,3:18:1.37:0,1,438	0/1:25,2:27:21.77:22,0,764	0/1:19,5:24:32.51:33,0,470	0/1:15,0:15:67.29:67,0,195	0/0:27,0:26:74.69:0,75,869	0/0:28,0:28:1.32:0,1,398	0/0:2,0:2:6.02:0,6,72
chr10	59732742	.	TTGC	T	2901.24	PASS	AB=0.920;AC=25;AF=0.521;AN=48;BaseQRankSum=7.965;DP=511;FS=7.291;HRun=0;HaplotypeScore=72.3517;InbreedingCoeff=0.7435;MQ=69.54;MQ0=5;MQRankSum=2.189;QD=12.61;ReadPosRankSum=0.974;VQSLOD=2.1649;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:6.02:0,6,117	1/1:2,7:10:15.02:184,15,0	0/0:29,0:24:14.94:0,15,240	0/0:35,0:29:9.03:0,9,130	./.	0/0:18,0:18:24.07:0,24,432	0/0:26,0:26:48.12:0,48,829	1/1:18,4:22:18.01:232,18,0	0/1:21,2:23:30.38:30,0,783	1/1:11,3:14:9:103,9,0	1/1:4,1:5:3.01:41,3,0	0/0:22,0:22:48.15:0,48,905	0/0:24,0:24:60.19:0,60,1119	1/1:10,8:18:23.44:293,23,0	1/1:14,16:30:33.11:448,33,0	1/1:7,7:14:18.03:225,18,0	1/1:12,26:38:60.20:815,60,0	0/0:21,0:21:42.14:0,42,818	0/0:21,0:20:0:0,0,0	1/1:5,1:6:3.01:41,3,0	1/1:15,11:25:21.07:285,21,0	0/0:9,0:9:6.02:0,6,116	./.	0/0:30,0:30:42.14:0,42,823	1/1:9,1:10:3.01:41,3,0	./.	1/1:6,8:14:27.05:346,27,0	./.
chr10	59733671	.	GC	G	9120.62	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=13.037;DP=602;FS=6.099;HRun=1;HaplotypeScore=61.6266;InbreedingCoeff=0.9839;MQ=88.60;MQ0=0;MQRankSum=-7.684;QD=38.32;ReadPosRankSum=4.601;VQSLOD=5.3582;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,30:30:84.28:1174,84,0	0/0:6,0:6:18.06:0,18,288	0/0:21,0:21:63.18:0,63,963	0/0:26,0:26:59.85:0,60,1021	1/1:0,23:23:63.21:878,63,0	1/1:0,20:20:51.17:713,51,0	1/1:0,15:15:39.13:545,39,0	0/0:37,0:37:99:0,108,1702	1/1:0,33:33:90.30:1259,90,0	0/0:25,0:25:72.24:0,72,1133	0/0:27,0:27:75.21:0,75,1127	1/1:0,21:21:60.20:839,60,0	1/1:0,22:22:63.18:860,63,0	0/0:24,0:24:72.25:0,72,1147	0/0:18,0:18:54.18:0,54,863	0/0:19,0:19:57.19:0,57,911	0/0:19,0:19:57.18:0,57,883	1/1:0,19:19:54.18:755,54,0	0/0:15,0:15:42.14:0,42,672	0/0:26,0:26:72.23:0,72,1127	0/0:19,0:19:57.18:0,57,887	1/1:0,20:20:48.16:671,48,0	1/1:0,16:16:45.15:629,45,0	1/1:0,19:19:57.19:797,57,0	0/0:22,0:22:63.19:0,63,961	0/0:21,0:21:60.20:0,60,938	0/0:37,0:37:99:0,111,1769	0/0:2,0:2:6.02:0,6,96
chr10	59733977	.	CAGAGAG	C	609.12	PASS	AB=0.949;AC=24;AF=0.522;AN=46;BaseQRankSum=1.956;DP=463;FS=7.652;HRun=0;HaplotypeScore=84.2759;InbreedingCoeff=0.3910;MQ=52.83;MQ0=16;MQRankSum=-0.759;QD=2.47;ReadPosRankSum=0.847;VQSLOD=0.9057;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:16:3.01:0,3,91	1/1:4,0:5:3.01:42,3,0	./.	0/1:20,0:7:0:0,0,0	./.	0/0:20,0:20:6.02:0,6,146	0/0:15,0:13:6.02:0,6,130	0/0:32,0:32:2.97:0,3,20	0/0:9,0:9:2.51:0,3,6	0/1:15,0:15:0:0,0,0	1/1:5,2:7:3.01:38,3,0	0/0:21,0:21:12.04:0,12,299	0/0:14,0:14:8.59:0,9,204	1/1:15,1:20:6.02:102,6,0	1/1:20,0:23:3.01:42,3,0	1/1:13,6:20:6.02:99,6,0	0/1:20,0:27:51.67:52,0,52	0/0:9,0:8:3.01:0,3,64	1/1:11,2:13:6:83,6,0	0/1:14,0:13:0:0,0,0	1/1:23,5:27:2.51:59,3,0	./.	./.	0/0:16,0:14:3.01:0,3,72	1/1:15,1:17:3.01:42,3,0	1/1:14,2:15:5.95:70,6,0	1/1:20,2:21:4.55:116,5,0	./.
chr10	59735171	.	GT	G	1169.80	PASS	AB=0.881;AC=13;AF=0.232;AN=56;BaseQRankSum=2.650;DP=1161;FS=0.000;HRun=2;HaplotypeScore=180.2559;InbreedingCoeff=-0.2975;MQ=37.08;MQ0=120;MQRankSum=-3.099;QD=2.00;ReadPosRankSum=0.450;VQSLOD=-0.7218;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:52,8:44:89.40:89,0,206	0/0:11,4:10:2.51:0,3,6	0/0:15,0:7:12.30:0,12,135	0/0:21,0:5:13.85:0,14,165	0/1:13,4:13:35.31:35,0,86	0/1:21,13:29:99:216,0,272	0/1:63,6:46:26.09:26,0,200	0/1:57,12:24:71.79:388,0,72	0/1:47,3:39:43.05:43,0,174	0/0:42,0:27:44.36:0,44,845	0/0:14,0:12:29.31:0,29,387	0/1:43,5:39:30.01:30,0,183	0/1:44,5:38:99:113,0,275	0/0:45,0:36:79.68:0,80,965	0/0:40,1:35:77.40:0,77,927	0/0:38,0:34:65.98:0,66,822	0/1:29,8:28:99:146,0,184	0/1:31,3:27:74.45:74,0,303	0/0:35,0:19:34.66:0,35,461	0/0:24,0:20:47.83:0,48,631	0/0:155,2:121:99:0,165,2051	0/1:23,2:21:19.51:20,0,163	0/1:26,3:24:56.97:57,0,179	0/1:57,5:53:85.70:86,0,308	0/0:25,0:20:38.13:0,38,491	0/0:45,1:35:56.49:0,56,911	0/0:41,2:37:24.17:0,24,703	0/0:14,0:11:21.54:0,22,278
chr10	59735172	.	T	TTG	222.15	PASS	AB=0.923;AC=21;AF=0.375;AN=56;BaseQRankSum=6.570;DP=1156;FS=12.182;HRun=0;HaplotypeScore=205.9917;InbreedingCoeff=0.6643;MQ=37.55;MQ0=117;MQRankSum=-5.142;QD=0.44;ReadPosRankSum=-1.571;VQSLOD=1.5313;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:49,0:45:6.39:36,6,0	0/1:15,0:10:0:0,0,0	0/0:17,0:7:11.63:0,12,98	0/0:23,0:6:10.49:0,10,72	1/1:12,0:12:4.82:31,5,0	0/1:30,0:29:1.25:1,0,37	1/1:62,0:47:9.02:32,9,0	1/1:68,0:24:10.34:77,10,0	1/1:32,2:41:3.83:53,4,0	0/0:39,0:28:33.05:0,33,377	0/0:15,0:13:20.73:0,21,217	1/1:34,0:39:5.99:33,6,0	0/1:44,0:39:11.82:12,0,18	0/0:44,0:35:41.93:0,42,482	0/0:42,0:36:28.07:0,28,371	0/0:40,0:36:19.77:0,20,288	0/0:34,0:28:3.66:0,4,76	1/1:25,0:27:11.31:58,11,0	0/0:33,0:17:9.26:0,9,133	0/0:22,0:21:29.21:0,29,332	0/0:149,0:119:80.56:0,81,861	1/1:22,0:20:5.07:24,5,0	1/1:17,0:24:12.48:45,12,0	0/0:45,0:53:2.50:0,3,31	0/0:23,0:19:17.98:0,18,191	0/0:44,0:34:15.81:0,16,250	0/0:39,0:35:23.22:0,23,354	0/0:13,0:11:16.28:0,16,198
chr10	59736698	.	TA	T	2590.90	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-3.927;DP=437;FS=0.842;HRun=10;HaplotypeScore=68.2730;InbreedingCoeff=0.9030;MQ=70.01;MQ0=3;MQRankSum=0.583;QD=11.88;ReadPosRankSum=2.393;VQSLOD=3.3396;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,0:19:18.11:75,18,0	1/1:1,5:6:17.63:134,18,0	0/0:19,0:10:7.35:0,7,102	0/0:15,0:11:1.54:0,2,53	1/1:2,0:31:57.98:179,58,0	1/1:5,16:21:5.80:279,6,0	1/1:1,5:6:9:78,9,0	1/1:4,29:33:86.91:738,87,0	1/1:0,0:11:20.15:59,20,0	0/0:28,0:28:54.89:0,55,644	0/0:13,0:13:20.09:0,20,249	1/1:1,8:9:12:104,12,0	1/1:0,9:9:18:156,18,0	0/0:13,0:13:30.07:0,30,322	0/0:9,0:9:24.06:0,24,265	0/0:8,0:8:21.02:0,21,219	1/1:5,31:34:71.97:625,72,0	1/1:2,0:17:24.44:72,24,0	0/0:18,0:18:42.11:0,42,463	0/0:10,0:9:24.02:0,24,245	0/0:5,0:5:12.03:0,12,132	1/1:1,3:4:6:52,6,0	1/1:1,7:8:14.99:130,15,0	1/1:1,6:7:15:130,15,0	0/0:22,0:22:53.97:0,54,564	0/0:22,0:21:60.13:0,60,648	0/0:24,0:24:63.11:0,63,667	0/0:9,0:9:27.07:0,27,298
chr10	59739239	.	GT	G	7056.80	PASS	AB=0.739;AC=51;AF=0.911;AN=56;BaseQRankSum=0.442;DP=604;FS=8.932;HRun=13;HaplotypeScore=71.0714;InbreedingCoeff=0.3284;MQ=73.67;MQ0=0;MQRankSum=-1.540;QD=12.04;ReadPosRankSum=4.035;VQSLOD=4.4059;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:9,13:25:14:176,0,14	1/1:4,0:12:16.28:47,16,0	0/0:18,0:15:20.91:0,21,167	0/1:15,0:14:10.61:11,0,58	1/1:11,26:37:19.11:467,19,0	1/1:3,19:22:47.69:350,48,0	0/1:6,10:17:49.71:165,0,50	1/1:15,1:38:36.97:127,37,0	1/1:3,10:14:28.84:203,29,0	1/1:7,17:24:23.38:314,23,0	1/1:4,18:23:34.53:371,35,0	1/1:1,11:13:34.85:247,35,0	1/1:7,13:22:16.63:265,17,0	1/1:1,12:14:31.87:225,32,0	1/1:1,17:19:43.77:312,44,0	1/1:1,24:26:61.67:443,62,0	1/1:2,0:27:43.24:124,43,0	1/1:1,9:10:26.84:197,27,0	1/1:5,12:18:26.50:213,26,0	1/1:4,32:39:60.73:539,61,0	1/1:3,0:3:2.96:22,3,0	1/1:5,21:26:56.38:409,56,0	1/1:8,13:25:34.84:220,35,0	1/1:1,13:14:35.80:263,36,0	1/1:7,19:27:17.56:283,18,0	1/1:13,16:31:34.84:358,35,0	1/1:3,29:34:39.52:510,40,0	1/1:2,9:11:26.84:197,27,0
chr10	59740110	.	G	GCCAA	21472.74	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-9.518;DP=808;FS=12.595;HRun=0;HaplotypeScore=105.2660;InbreedingCoeff=0.9911;MQ=66.14;MQ0=6;MQRankSum=-1.258;QD=31.30;ReadPosRankSum=2.546;VQSLOD=4.4248;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,47:57:44.54:2133,45,0	0/0:12,0:12:21.03:0,21,268	0/0:35,0:25:32.74:0,33,367	0/0:27,0:24:25.78:0,26,272	1/1:3,26:30:59.75:1074,60,0	1/1:6,24:31:33.11:801,33,0	1/1:13,14:28:26.71:655,27,0	0/0:25,0:25:33.05:0,33,362	1/1:13,19:33:35.48:802,35,0	1/1:9,21:34:75.10:1241,75,0	1/1:5,10:16:14.88:252,15,0	1/1:6,21:32:45.15:1066,45,0	1/1:12,12:24:21.07:510,21,0	1/1:8,24:33:39.13:926,39,0	1/1:11,19:30:42.14:1019,42,0	1/1:8,22:32:48.16:1165,48,0	0/0:21,0:22:54.05:0,54,762	1/1:6,12:19:26.58:592,27,0	1/1:13,12:24:37.27:668,37,0	1/1:9,28:39:83.92:1560,84,0	1/1:6,20:26:39.13:935,39,0	1/1:5,25:31:65.54:1072,66,0	1/1:7,10:16:20.92:502,21,0	1/1:16,20:36:37.37:876,37,0	1/1:10,19:29:39.13:925,39,0	1/1:11,25:37:78.15:1386,78,0	1/1:9,23:32:32.84:801,33,0	1/1:4,9:13:21.07:510,21,0
chr10	59741112	.	C	CA	2409.48	PASS	AB=0.764;AC=46;AF=0.821;AN=56;BaseQRankSum=-1.894;DP=401;FS=0.645;HRun=14;HaplotypeScore=70.2493;InbreedingCoeff=0.4723;MQ=51.66;MQ0=8;MQRankSum=-0.592;QD=6.66;ReadPosRankSum=-1.410;VQSLOD=2.2477;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,1:27:23.97:117,24,0	0/0:4,0:11:10.14:0,10,29	0/0:2,0:2:2.90:0,3,19	0/0:4,0:4:5.11:0,5,47	1/1:18,1:25:36.65:208,37,0	1/1:6,0:11:2.84:14,3,0	1/1:4,3:10:10.09:70,10,0	0/0:9,0:21:26.39:0,26,88	1/1:5,0:5:3.82:18,4,0	1/1:14,10:24:17.99:156,18,0	1/1:5,7:13:23.68:186,24,0	1/1:4,0:12:2.88:15,3,0	1/1:3,0:9:5.68:28,6,0	1/1:7,7:15:13.20:101,13,0	1/1:5,7:11:7.24:53,7,0	1/1:1,6:7:6.47:53,6,0	0/1:7,0:22:1.99:2,0,40	1/1:7,0:11:15.20:77,15,0	1/1:4,5:16:35.32:258,35,0	1/1:13,14:28:5.18:296,5,0	0/1:3,8:12:20.70:75,0,21	1/1:9,0:14:27.40:136,27,0	1/1:7,0:13:11.29:63,11,0	1/1:6,0:6:3.35:16,3,0	1/1:5,15:20:4.73:165,5,0	1/1:8,11:20:6.08:266,6,0	1/1:7,8:15:12:105,12,0	1/1:3,4:6:9:79,9,0
chr10	59742956	.	TACAC	T	3711.84	PASS	AB=0.813;AC=24;AF=0.480;AN=50;BaseQRankSum=-5.634;DP=657;FS=2.048;HRun=0;HaplotypeScore=133.6039;InbreedingCoeff=0.6936;MQ=54.01;MQ0=13;MQRankSum=1.399;QD=11.25;ReadPosRankSum=4.161;VQSLOD=2.9903;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:20,11:29:28.01:172,0,28	./.	./.	./.	1/1:15,11:28:5.50:227,6,0	1/1:10,17:27:30.10:478,30,0	1/1:14,9:22:5.54:70,6,0	1/1:36,0:33:34.36:271,34,0	1/1:12,10:24:20.19:313,20,0	0/0:24,0:25:45.27:0,45,469	0/0:15,0:19:8.98:0,9,95	1/1:5,10:15:2.68:48,3,0	1/1:10,12:22:19.42:331,19,0	0/0:10,0:17:3:0,3,28	0/0:8,0:18:10.99:0,11,101	0/0:14,0:24:11.35:0,11,129	1/1:8,14:24:26.83:395,27,0	1/1:5,22:27:33.11:526,33,0	0/0:6,0:8:9.03:0,9,144	0/0:13,0:23:7.24:0,7,48	0/0:33,0:54:17.86:0,18,230	1/1:4,15:20:15.05:239,15,0	1/1:8,21:29:29.93:479,30,0	0/1:21,2:24:44.16:162,0,44	0/0:15,0:30:13.83:0,14,195	0/0:17,0:24:28.76:0,29,340	0/0:12,0:23:20.85:0,21,256	0/0:5,0:19:12.02:0,12,156
chr10	59743882	.	C	CCA	22412.35	PASS	AB=0.759;AC=46;AF=0.821;AN=56;BaseQRankSum=-5.385;DP=758;FS=2.517;HRun=0;HaplotypeScore=109.5027;InbreedingCoeff=0.7267;MQ=76.42;MQ0=4;MQRankSum=-4.645;QD=34.48;ReadPosRankSum=6.544;VQSLOD=7.0816;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,62:70:99:2821,172,0	0/0:6,0:6:15.05:0,15,188	0/0:45,0:36:46.52:0,47,614	0/0:34,0:31:33.62:0,34,522	1/1:5,22:28:66.70:1063,67,0	1/1:4,22:28:57.19:941,57,0	0/1:9,22:31:14.87:832,0,15	0/0:23,0:23:48.14:0,48,588	1/1:1,26:27:66.23:1090,66,0	1/1:4,22:26:66.18:1049,66,0	1/1:6,10:16:27.06:416,27,0	1/1:2,18:20:47.92:792,48,0	1/1:8,12:19:4.62:602,5,0	1/1:3,15:18:39.13:644,39,0	1/1:4,30:34:75.26:1238,75,0	1/1:3,29:31:57.19:942,57,0	0/1:26,2:28:23.86:24,0,787	1/1:5,18:22:45.15:743,45,0	1/1:5,15:20:45.14:706,45,0	1/1:4,24:28:34.72:1100,35,0	1/1:7,38:45:55.79:1448,56,0	1/1:3,13:16:33.11:545,33,0	1/1:1,15:17:35.72:594,36,0	1/1:5,22:27:63.19:1007,63,0	1/1:5,26:31:75.26:1239,75,0	1/1:3,25:28:75.26:1228,75,0	1/1:5,26:32:34.72:1102,35,0	1/1:0,5:5:15.05:248,15,0
chr10	59745489	.	AG	A	10632.24	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=13.559;DP=706;FS=0.287;HRun=1;HaplotypeScore=68.8642;InbreedingCoeff=0.9996;MQ=59.85;MQ0=1;MQRankSum=2.341;QD=38.38;ReadPosRankSum=1.466;VQSLOD=5.4227;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,35:35:99:1384,99,0	0/0:8,0:8:24.08:0,24,380	0/0:22,0:13:39.13:0,39,589	0/0:34,0:21:60.15:0,60,889	1/1:0,23:23:51.17:713,51,0	1/1:0,30:30:78.26:1091,78,0	1/1:0,22:22:57.19:797,57,0	0/0:29,0:29:84.29:0,84,1343	1/1:0,20:20:60.20:839,60,0	0/0:23,0:23:69.23:0,69,1082	0/0:18,0:18:54.18:0,54,863	1/1:0,30:30:87.29:1216,87,0	1/1:0,22:22:66.22:922,66,0	0/0:21,0:21:63.20:0,63,983	0/0:30,0:30:90.31:0,90,1439	0/0:27,0:27:81.26:0,81,1271	0/0:36,0:36:99:0,108,1702	1/1:2,32:34:71.30:1237,71,0	0/0:22,0:22:66.22:0,66,1048	0/0:25,0:25:75.26:0,75,1198	0/0:39,0:39:99:0,117,1870	1/1:0,21:21:60.20:839,60,0	1/1:0,17:17:48.16:671,48,0	1/1:0,23:23:66.22:923,66,0	0/0:24,0:24:72.22:0,72,1126	0/0:35,0:35:99:0,105,1657	0/0:25,0:25:75.24:0,75,1176	0/0:11,0:11:30.10:0,30,480
chr10	59746101	.	C	CT	1547.65	PASS	AB=0.568;AC=7;AF=0.125;AN=56;BaseQRankSum=-8.215;DP=693;FS=3.664;HRun=10;HaplotypeScore=102.3076;InbreedingCoeff=0.7632;MQ=73.96;MQ0=2;MQRankSum=0.297;QD=16.29;ReadPosRankSum=-0.250;VQSLOD=3.6687;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:80.84:0,81,665	1/1:2,7:9:15.04:160,15,0	0/0:24,0:25:32.91:0,33,238	0/0:24,0:23:11.61:0,12,111	0/0:25,0:27:54.02:0,54,409	0/0:21,0:22:52.95:0,53,421	0/0:17,0:18:34.97:0,35,277	1/1:11,19:31:10.76:491,11,0	0/0:21,0:22:55.77:0,56,435	0/0:29,0:30:76.94:0,77,621	0/0:15,0:15:1.09:0,1,213	0/0:27,0:27:59.91:0,60,492	0/0:24,0:25:64.52:0,65,516	0/0:28,0:28:62.86:0,63,510	0/0:30,0:32:84.94:0,85,673	0/0:31,0:34:81.92:0,82,645	0/1:6,19:25:10.17:313,0,10	0/0:17,0:17:20.33:0,20,281	0/0:26,0:26:68.63:0,69,547	0/0:19,0:20:28.01:0,28,330	0/0:37,0:37:83.86:0,84,686	0/0:21,0:21:57.22:0,57,452	0/0:24,0:24:50.11:0,50,398	0/0:20,0:21:40.67:0,41,323	0/0:16,0:17:49.98:0,50,400	0/0:26,0:26:71.90:0,72,590	1/1:3,24:30:63.73:726,64,0	0/0:16,0:16:24.59:0,25,346
chr10	59746130	.	TC	T	7666.45	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=9.462;DP=630;FS=3.092;HRun=3;HaplotypeScore=75.6476;InbreedingCoeff=0.9985;MQ=92.06;MQ0=1;MQRankSum=-4.063;QD=33.48;ReadPosRankSum=2.270;VQSLOD=5.5670;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,36:36:96.30:1189,96,0	0/0:6,0:6:18.06:0,18,259	0/0:38,0:37:99:0,105,1457	0/0:25,0:25:56.08:0,56,777	1/1:0,27:27:69.22:855,69,0	1/1:0,20:20:57.18:706,57,0	1/1:0,13:13:36.11:446,36,0	0/0:27,0:27:75.22:0,75,1042	1/1:1,25:26:75.24:929,75,0	0/0:30,0:30:87.29:0,87,1247	0/0:14,0:14:42.12:0,42,570	1/1:0,19:19:51.16:632,51,0	1/1:0,19:19:51.16:631,51,0	0/0:20,0:20:57.19:0,57,819	0/0:31,0:31:90.30:0,90,1290	0/0:36,0:36:99:0,102,1424	0/0:18,0:18:51.14:0,51,713	1/1:0,13:13:36.11:446,36,0	0/0:27,0:27:75.22:0,75,1059	0/0:19,0:19:57.16:0,57,780	0/0:31,0:31:90.29:0,90,1276	1/1:0,19:19:54.17:669,54,0	1/1:1,19:20:48.15:595,48,0	1/1:3,14:17:48.11:567,48,0	0/0:16,0:16:48.16:0,48,691	0/0:26,0:26:78.19:0,78,1097	0/0:29,0:29:81.24:0,81,1129	0/0:8,0:8:24.08:0,24,345
chr10	59746319	.	TG	T	1166.81	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=8.749;DP=544;FS=0.503;HRun=1;HaplotypeScore=74.3377;InbreedingCoeff=0.8872;MQ=53.54;MQ0=21;MQRankSum=-5.717;QD=11.79;ReadPosRankSum=-5.092;VQSLOD=-0.0737;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,2:21:9.17:0,9,125	0/0:12,0:11:27.08:0,27,392	0/0:23,1:14:15.67:0,16,424	0/0:12,0:6:15.05:0,15,219	0/0:23,0:21:26.45:0,26,171	1/1:8,2:10:20.86:161,21,0	1/1:14,3:15:17.13:210,17,0	0/0:36,0:35:99:0,105,1526	0/0:17,0:17:23.71:0,24,258	0/0:24,0:24:69.18:0,69,993	0/0:26,0:25:75.25:0,75,1145	1/1:12,2:13:7.77:176,8,0	1/1:11,3:14:8.44:162,8,0	0/0:11,0:11:29.30:0,29,399	0/0:19,0:18:48.13:0,48,687	0/0:20,0:20:56.45:0,56,817	0/0:29,0:28:34.70:0,35,961	0/0:10,0:9:6:0,6,64	0/0:23,0:22:66.19:0,66,906	0/0:25,0:25:69.16:0,69,1015	0/0:17,0:17:48.08:0,48,705	1/1:15,3:18:20.08:296,20,0	1/1:10,3:13:24.74:227,25,0	1/1:9,4:13:0.43:117,0,0	0/0:25,0:24:60.11:0,60,848	0/0:29,0:28:84.28:0,84,1253	0/0:32,0:31:93.23:0,93,1355	0/0:9,0:9:27.09:0,27,412
chr10	59749170	.	T	TA	24689.95	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=1.542;DP=624;FS=0.000;HRun=1;HaplotypeScore=87.2686;InbreedingCoeff=0.9987;MQ=76.85;MQ0=0;MQRankSum=-8.131;QD=41.50;ReadPosRankSum=4.767;VQSLOD=4.9800;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,23:23:63.21:944,63,0	1/1:0,8:8:24.08:360,24,0	0/0:17,0:17:45.11:0,45,559	0/0:12,0:12:36.12:0,36,467	1/1:2,34:36:93.27:1369,93,0	1/1:0,21:21:60.20:899,60,0	1/1:0,16:16:42.14:630,42,0	1/1:1,22:23:66.22:987,66,0	1/1:0,19:19:54.18:809,54,0	1/1:1,22:23:66.22:990,66,0	1/1:0,24:24:66.18:964,66,0	1/1:2,17:19:51.17:764,51,0	1/1:1,28:29:87.29:1296,87,0	1/1:0,18:18:54.18:809,54,0	1/1:2,21:23:60.20:899,60,0	1/1:0,33:33:93.32:1394,93,0	1/1:0,26:26:72.24:1079,72,0	1/1:3,23:26:69.17:1007,69,0	1/1:1,20:21:63.19:919,63,0	1/1:0,15:15:42.06:580,42,0	1/1:1,21:22:60.20:899,60,0	1/1:1,26:28:75.15:1046,75,0	1/1:0,20:20:54.18:809,54,0	1/1:0,14:14:39.13:584,39,0	1/1:0,27:27:75.25:1124,75,0	1/1:0,29:29:87.28:1282,87,0	1/1:0,38:37:99:1708,114,0	1/1:2,12:14:36.12:540,36,0
chr10	59749687	.	T	TACACACACACAC	23469.94	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-2.995;DP=632;FS=12.348;HRun=0;HaplotypeScore=234.6902;InbreedingCoeff=0.7014;MQ=57.22;MQ0=2;MQRankSum=-5.259;QD=41.10;ReadPosRankSum=2.778;VQSLOD=2.9530;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:25,8:36:23.86:1469,24,0	1/1:7,0:6:6.02:257,6,0	0/0:34,0:25:28.07:0,28,700	0/0:26,0:21:26.61:0,27,484	1/1:25,5:33:6.02:347,6,0	1/1:17,9:28:22.63:978,23,0	1/1:13,1:19:11.90:646,12,0	1/1:17,0:15:9.03:218,9,0	1/1:12,4:16:21.07:1134,21,0	1/1:32,0:39:61.07:1925,61,0	1/1:16,0:18:6.02:313,6,0	1/1:12,5:19:18.06:918,18,0	1/1:17,6:26:39.13:1842,39,0	1/1:16,0:18:6.02:314,6,0	1/1:19,1:28:33.11:1714,33,0	1/1:17,0:24:18.06:876,18,0	1/1:15,0:15:18.06:777,18,0	1/1:13,1:14:6.48:355,6,0	1/1:13,0:14:27.05:1105,27,0	1/1:19,0:25:15.03:745,15,0	1/1:23,0:22:18.19:508,18,0	1/1:16,5:21:12.08:706,12,0	1/1:7,5:13:14.86:771,15,0	1/1:15,5:20:18.06:948,18,0	1/1:24,1:31:21.07:1118,21,0	1/1:23,0:31:60.20:2152,60,0	1/1:23,0:22:15.05:715,15,0	1/1:2,0:5:12.04:618,12,0
chr10	59750342	.	A	AT	4569.06	PASS	AB=0.669;AC=44;AF=0.786;AN=56;BaseQRankSum=0.802;DP=492;FS=13.342;HRun=12;HaplotypeScore=95.6648;InbreedingCoeff=0.4953;MQ=72.48;MQ0=1;MQRankSum=-4.187;QD=11.84;ReadPosRankSum=1.165;VQSLOD=3.0772;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,2:21:46:265,46,0	0/1:7,1:8:11.29:11,0,91	0/0:19,0:16:2.70:0,3,74	0/0:21,0:18:19.77:0,20,128	1/1:11,0:17:26.04:130,26,0	1/1:6,0:15:32.93:178,33,0	1/1:3,0:11:14.20:71,14,0	0/0:37,1:39:51.28:0,51,540	1/1:8,0:16:28.75:157,29,0	1/1:13,11:25:45.03:395,45,0	1/1:5,9:15:29.83:263,30,0	1/1:6,1:14:12.81:59,13,0	1/1:5,0:8:17.01:84,17,0	1/1:4,8:15:4.92:187,5,0	0/1:5,10:15:19.83:141,0,20	1/1:4,11:15:30.05:292,30,0	0/0:24,0:24:32.75:0,33,241	1/1:5,1:15:20.26:124,20,0	1/1:8,13:23:12:272,12,0	1/1:4,13:17:39.01:368,39,0	1/1:7,5:13:0.78:143,1,0	1/1:10,0:17:19.96:108,20,0	1/1:4,1:14:14.20:71,14,0	1/1:4,0:13:17.04:86,17,0	0/1:10,14:22:4.76:278,0,5	1/1:5,19:24:38.14:523,38,0	1/1:5,17:20:17.25:275,17,0	0/1:1,3:5:7.05:87,0,7
chr10	59752596	.	ATTTTT	A	8532.16	PASS	AB=0.833;AC=51;AF=0.911;AN=56;BaseQRankSum=4.018;DP=331;FS=17.153;HRun=11;HaplotypeScore=135.1887;InbreedingCoeff=0.5587;MQ=62.09;MQ0=8;MQRankSum=-4.628;QD=28.16;ReadPosRankSum=4.610;VQSLOD=1.6822;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:15,14:29:48.12:840,48,0	1/1:3,4:7:12.02:216,12,0	0/0:17,0:12:23.68:0,24,546	0/0:10,0:8:7.82:0,8,181	1/1:2,11:13:27.06:479,27,0	1/1:8,4:12:20.99:289,21,0	1/1:6,8:14:27.07:483,27,0	1/1:17,3:18:12.39:188,12,0	1/1:6,7:13:21.04:377,21,0	1/1:7,9:16:27.04:459,27,0	1/1:4,6:10:18.03:320,18,0	1/1:9,4:12:15.02:266,15,0	1/1:6,2:8:9.01:165,9,0	1/1:10,3:12:11.99:195,12,0	1/1:4,8:11:24.07:424,24,0	1/1:7,3:10:8.99:161,9,0	1/1:3,4:7:15.05:273,15,0	0/1:8,2:8:52.48:99,0,52	1/1:4,2:6:6:105,6,0	1/1:2,9:11:27.08:482,27,0	1/1:4,2:5:6.01:106,6,0	1/1:3,2:5:6:107,6,0	1/1:4,11:15:36.10:613,36,0	1/1:2,4:5:15.05:257,15,0	1/1:2,7:9:24.08:434,24,0	1/1:6,12:18:39.10:661,39,0	1/1:6,6:12:21.05:376,21,0	1/1:5,3:8:9:156,9,0
chr10	59752602	.	T	TAA	4897.53	PASS	AB=0.941;AC=51;AF=0.911;AN=56;BaseQRankSum=4.873;DP=247;FS=20.451;HRun=0;HaplotypeScore=119.2606;InbreedingCoeff=0.3461;MQ=62.66;MQ0=15;MQRankSum=-2.476;QD=21.58;ReadPosRankSum=5.346;VQSLOD=3.5507;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,5:19:48.05:455,48,0	1/1:4,0:4:12.01:120,12,0	0/0:20,0:12:24.51:0,25,345	0/1:7,0:6:1.74:2,0,89	1/1:12,0:12:27.03:295,27,0	1/1:9,0:9:21:187,21,0	1/1:11,0:11:24.92:231,25,0	1/1:9,0:5:5.77:54,6,0	1/1:7,0:7:21.04:218,21,0	1/1:10,0:10:5.22:289,5,0	1/1:7,0:7:18.04:207,18,0	1/1:6,0:5:15.04:165,15,0	1/1:2,2:5:9:83,9,0	1/1:5,0:5:12:108,12,0	1/1:12,0:11:24.04:238,24,0	1/1:4,0:4:9.02:96,9,0	1/1:5,2:7:15.01:149,15,0	0/1:6,0:4:39.84:43,0,40	1/1:2,0:2:6:62,6,0	1/1:11,0:11:27.05:273,27,0	1/1:7,0:6:6.01:67,6,0	1/1:3,0:3:6.02:79,6,0	1/1:15,0:15:36.07:396,36,0	1/1:6,0:5:15.04:185,15,0	1/1:10,1:11:23.98:239,24,0	0/1:13,1:14:1.16:369,0,1	1/1:8,0:8:21.01:196,21,0	1/1:6,0:5:9.01:94,9,0
chr10	59752611	.	G	GTTTAT	8969.72	PASS	AB=0.759;AC=48;AF=0.857;AN=56;BaseQRankSum=5.756;DP=242;FS=27.074;HRun=0;HaplotypeScore=101.4332;InbreedingCoeff=0.2531;MQ=41.78;MQ0=28;MQRankSum=-0.963;QD=40.04;ReadPosRankSum=3.969;VQSLOD=3.1334;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,7:14:42.14:818,42,0	1/1:1,2:4:12.04:227,12,0	0/0:14,0:6:7.52:0,8,179	0/0:4,0:2:6.02:0,6,104	1/1:2,4:11:27.01:485,27,0	1/1:2,2:6:12.04:242,12,0	1/1:3,2:9:24.08:466,24,0	1/1:8,0:4:10.28:148,10,0	1/1:1,4:8:21.07:410,21,0	0/1:2,7:11:99:668,0,107	1/1:2,4:7:18.06:350,18,0	1/1:2,2:5:12.04:249,12,0	1/1:0,2:2:6.02:124,6,0	1/1:3,3:5:12.03:212,12,0	1/1:6,6:11:24.08:489,24,0	1/1:2,2:4:9.03:183,9,0	1/1:2,3:5:12.04:237,12,0	0/1:6,1:6:60.49:115,0,60	0/1:2,1:4:99:133,0,125	1/1:2,5:11:27.09:534,27,0	1/1:7,1:7:8.96:122,9,0	1/1:3,0:4:6.02:115,6,0	1/1:4,2:15:33.11:642,33,0	1/1:3,3:5:12.04:224,12,0	1/1:4,2:11:21.07:428,21,0	0/1:2,5:13:30.72:785,0,31	1/1:1,4:7:18.06:355,18,0	1/1:4,3:6:9.03:210,9,0
chr10	59752615	.	TA	T	2267.65	PASS	AB=0.817;AC=49;AF=0.875;AN=56;BaseQRankSum=5.278;DP=251;FS=18.216;HRun=1;HaplotypeScore=116.8729;InbreedingCoeff=0.1131;MQ=37.76;MQ0=39;MQRankSum=0.033;QD=9.22;ReadPosRankSum=1.863;VQSLOD=0.0746;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,7:14:41.07:264,41,0	1/1:3,2:4:10.16:52,10,0	0/1:11,0:5:7.87:8,0,67	0/0:5,0:2:6.02:0,6,76	1/1:7,4:11:21.68:129,22,0	1/1:5,2:6:10.69:64,11,0	1/1:9,2:9:19.82:126,20,0	1/1:11,0:4:3.92:19,4,0	1/1:4,4:8:18.28:102,18,0	0/1:4,7:11:58.87:214,0,59	1/1:5,4:7:14.16:71,14,0	1/1:5,2:5:10.96:69,11,0	1/1:0,2:2:5.97:45,6,0	1/1:2,4:5:11.30:70,11,0	1/1:8,6:11:23.82:174,24,0	1/1:4,2:4:7.96:46,8,0	1/1:3,3:5:8.75:46,9,0	0/1:7,1:6:28.83:29,0,37	0/1:4,1:4:34.77:35,0,80	1/1:6,5:11:25.49:170,25,0	1/1:11,1:7:1.36:3,1,0	1/1:7,0:4:3.63:10,4,0	1/1:13,2:15:26.24:137,26,0	1/1:4,3:5:9.38:50,9,0	1/1:9,2:11:18.86:111,19,0	0/1:10,5:13:13:167,0,13	1/1:3,4:7:17.84:128,18,0	1/1:5,3:6:8.90:67,9,0
chr10	59752621	.	T	TC	1394.72	PASS	AB=0.754;AC=36;AF=0.643;AN=56;BaseQRankSum=7.667;DP=267;FS=45.343;HRun=0;HaplotypeScore=118.8479;InbreedingCoeff=-0.0496;MQ=32.90;MQ0=57;MQRankSum=-0.595;QD=6.09;ReadPosRankSum=6.358;VQSLOD=1.3736;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,7:14:19.18:137,19,0	0/1:4,2:4:2.89:12,0,3	0/0:14,0:4:7.57:0,8,88	0/0:6,0:1:3.01:0,3,42	0/1:7,4:11:7.59:59,0,8	0/1:5,2:6:2.02:29,0,2	1/1:11,2:9:15.08:90,15,0	0/0:11,0:4:0.30:0,0,13	1/1:4,4:8:0.46:42,0,0	0/1:4,7:11:86.41:265,0,86	0/1:7,4:7:16.03:22,0,16	1/1:5,2:5:4.15:48,4,0	1/1:0,2:2:5.91:38,6,0	1/1:2,4:5:3.18:42,3,0	1/1:9,6:11:23.59:149,24,0	1/1:5,2:4:1.45:29,1,0	0/1:3,3:5:10.86:11,0,11	0/1:7,1:6:7.19:7,0,49	0/1:5,1:4:31.10:31,0,90	1/1:6,5:11:12.91:108,13,0	1/1:11,1:7:1.79:5,2,0	0/0:7,0:4:4.44:0,4,14	0/1:14,2:15:3.53:37,0,4	0/1:5,3:5:0.35:14,0,0	1/1:10,2:11:3.53:61,4,0	0/1:10,5:13:65.30:169,0,65	0/1:4,4:7:3.59:56,0,4	1/1:5,3:6:8.88:76,9,0
chr10	59752784	.	C	CTT	473.63	PASS	AB=1.000;AC=29;AF=0.806;AN=36;BaseQRankSum=-0.108;DP=76;FS=20.061;HRun=0;HaplotypeScore=13.2364;InbreedingCoeff=0.3251;MQ=68.07;MQ0=15;MQRankSum=-1.779;QD=12.14;ReadPosRankSum=-3.449;VQSLOD=0.8255;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,4:6:3.01:56,3,0	./.	0/0:9,0:5:8.30:0,8,144	0/0:13,0:6:18.06:0,18,281	1/1:2,0:2:3:27,3,0	./.	0/1:2,0:1:0:0,0,0	./.	./.	0/1:2,0:1:0:0,0,0	1/1:2,0:2:6.01:73,6,0	1/1:1,0:1:3.01:40,3,0	1/1:2,0:2:3.01:43,3,0	1/1:1,0:1:2.97:20,3,0	1/1:1,0:1:3.01:45,3,0	./.	0/1:2,0:2:0:0,0,0	1/1:1,0:1:3.01:44,3,0	1/1:5,0:3:3:26,3,0	./.	./.	1/1:3,0:1:3:26,3,0	1/1:2,0:2:6.01:68,6,0	./.	./.	1/1:4,0:3:3:27,3,0	./.	1/1:2,0:2:6.02:81,6,0
chr10	59753511	.	GAC	G	809.05	PASS	AB=0.872;AC=19;AF=0.365;AN=52;BaseQRankSum=-0.301;DP=588;FS=11.428;HRun=0;HaplotypeScore=86.7969;InbreedingCoeff=0.5442;MQ=57.60;MQ0=7;MQRankSum=2.675;QD=3.47;ReadPosRankSum=0.562;VQSLOD=1.3564;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:23,8:32:26.76:67,0,27	0/0:5,0:5:3.01:0,3,43	./.	./.	1/1:17,3:20:3.01:32,3,0	1/1:22,4:26:20.46:199,20,0	0/1:20,1:20:15.59:26,0,16	0/0:31,0:30:9.42:0,9,77	1/1:11,1:12:11.86:111,12,0	0/0:20,0:19:18.02:0,18,177	0/0:12,0:12:2.35:0,2,23	1/1:9,5:15:11.21:110,11,0	1/1:19,7:26:9.02:97,9,0	0/0:17,0:17:27.02:0,27,257	0/0:19,0:24:6:0,6,51	0/0:18,0:25:14.99:0,15,129	0/0:17,0:26:33.04:0,33,368	0/1:19,1:22:2.76:107,0,3	0/0:14,0:16:6.01:0,6,62	0/0:13,0:12:9.02:0,9,111	0/0:26,0:32:6:0,6,51	1/1:12,1:14:5.85:46,6,0	1/1:11,1:14:5.85:46,6,0	1/1:23,4:30:19.58:145,20,0	0/0:20,0:23:2.91:0,3,26	0/0:20,0:20:33.06:0,33,391	0/0:19,0:19:26.93:0,27,249	0/0:5,0:9:8.98:0,9,89
chr10	59759873	.	A	AT	5838.05	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-13.024;DP=615;FS=5.079;HRun=10;HaplotypeScore=69.8705;InbreedingCoeff=0.9571;MQ=77.44;MQ0=1;MQRankSum=-1.549;QD=22.45;ReadPosRankSum=1.631;VQSLOD=5.9265;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,25:28:72.01:748,72,0	0/0:1,0:13:22.41:0,22,65	0/0:19,0:18:23.12:0,23,209	0/0:19,0:18:4.31:0,4,181	1/1:6,23:29:47.35:655,47,0	1/1:6,26:32:53.51:763,54,0	1/1:7,15:22:20.51:423,21,0	0/0:7,0:35:56.79:0,57,168	1/1:5,25:30:60.15:640,60,0	0/0:24,0:24:50.90:0,51,419	0/0:18,0:18:44.93:0,45,367	1/1:2,16:18:33.08:352,33,0	1/1:3,18:22:56.98:589,57,0	0/0:21,0:21:56.91:0,57,465	0/0:20,0:20:56.91:0,57,463	0/0:18,2:20:9.95:0,10,288	0/0:1,0:27:44.81:0,45,129	1/1:2,20:23:53.97:558,54,0	0/0:19,0:19:47.90:0,48,388	0/0:22,1:23:30.92:0,31,458	0/0:21,1:22:22.02:0,22,381	1/1:6,19:26:10.73:509,11,0	1/1:2,17:19:39.97:410,40,0	1/1:3,8:11:18.05:192,18,0	0/0:14,1:15:9.95:0,10,285	0/0:23,1:25:35.96:0,36,489	0/0:23,0:23:56.89:0,57,465	0/0:12,0:12:29.74:0,30,234
chr10	59762346	.	G	GT	4471.14	PASS	AB=0.970;AC=25;AF=0.446;AN=56;BaseQRankSum=-8.492;DP=547;FS=0.357;HRun=11;HaplotypeScore=56.0816;InbreedingCoeff=0.7970;MQ=69.16;MQ0=0;MQRankSum=0.365;QD=18.55;ReadPosRankSum=0.030;VQSLOD=5.6233;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,29:35:74.98:745,75,0	0/0:4,0:4:11.94:0,12,91	0/1:22,0:11:24.01:24,0,52	0/1:21,0:15:33.40:33,0,38	1/1:5,19:25:39.51:534,40,0	1/1:1,12:13:36.07:365,36,0	1/1:0,11:11:30.06:305,30,0	0/0:23,2:25:38.27:0,38,479	1/1:1,13:14:39.08:396,39,0	0/0:25,1:28:34.60:0,35,443	0/0:16,0:17:46.85:0,47,351	1/1:3,16:19:24.86:433,25,0	1/1:5,19:24:33.85:514,34,0	0/0:18,0:18:50.79:0,51,392	0/0:23,0:25:60.85:0,61,452	0/0:15,1:18:15.46:0,15,283	0/0:41,0:43:99:0,103,778	1/1:3,14:17:37.89:370,38,0	0/1:9,1:10:3.58:4,0,154	0/0:17,0:18:46.84:0,47,354	0/0:11,0:12:28.93:0,29,215	1/1:1,9:10:27.05:274,27,0	1/1:2,10:12:29.98:291,30,0	1/1:1,7:8:18.04:183,18,0	0/0:28,0:29:73.72:0,74,563	0/0:23,0:23:59.73:0,60,464	0/0:33,0:32:73.66:0,74,556	0/0:12,0:12:32.09:0,32,239
chr10	59763306	.	CTT	C	9072.95	PASS	AB=0.620;AC=50;AF=0.893;AN=56;BaseQRankSum=-5.344;DP=548;FS=18.167;HRun=13;HaplotypeScore=80.6089;InbreedingCoeff=0.5826;MQ=68.80;MQ0=6;MQRankSum=0.083;QD=18.04;ReadPosRankSum=5.933;VQSLOD=2.0938;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,24:30:53.45:539,53,0	1/1:1,6:7:18.02:175,18,0	0/0:24,0:13:14.91:0,15,171	0/0:19,0:12:21.90:0,22,229	1/1:7,12:19:23.09:231,23,0	1/1:5,17:22:48.06:465,48,0	1/1:3,17:20:42.05:407,42,0	1/1:10,32:42:96.04:920,96,0	1/1:1,13:14:36.04:349,36,0	1/1:5,8:14:23.73:215,24,0	0/1:5,7:12:4.58:154,0,5	1/1:10,11:22:47.68:437,48,0	1/1:7,9:15:29.93:280,30,0	1/1:2,12:14:19.27:201,19,0	1/1:7,15:23:0.68:255,1,0	0/1:5,8:14:16.93:163,0,17	1/1:4,16:21:29.86:390,30,0	1/1:3,13:19:29.42:366,29,0	1/1:5,15:20:45.03:436,45,0	1/1:7,12:21:32.96:320,33,0	1/1:7,23:29:52.77:521,53,0	1/1:6,15:23:23.39:367,23,0	1/1:4,13:18:35.35:328,35,0	1/1:4,14:19:15.04:349,15,0	1/1:2,16:18:39.02:378,39,0	1/1:5,10:15:29.98:291,30,0	1/1:10,12:22:38.92:378,39,0	1/1:1,5:7:17.76:157,18,0
chr10	59763326	.	CGT	C	1142.06	PASS	AB=0.928;AC=21;AF=0.438;AN=48;BaseQRankSum=2.238;DP=588;FS=6.913;HRun=0;HaplotypeScore=123.1969;InbreedingCoeff=0.6329;MQ=55.15;MQ0=14;MQRankSum=1.980;QD=4.36;ReadPosRankSum=3.075;VQSLOD=2.3879;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:26,1:30:11.53:74,12,0	./.	./.	./.	./.	1/1:16,2:19:11.85:103,12,0	1/1:17,3:20:18.05:196,18,0	0/0:40,0:38:7.26:0,7,78	1/1:12,1:18:17.21:103,17,0	0/0:15,0:16:21.90:0,22,261	0/0:12,0:13:15.02:0,15,173	1/1:12,9:22:23.90:242,24,0	0/1:11,1:13:33.07:50,0,33	0/0:16,0:17:24.05:0,24,287	0/0:14,0:17:12.01:0,12,122	0/0:15,0:13:9.01:0,9,101	0/0:23,0:26:26.98:0,27,280	1/1:16,0:22:17.04:84,17,0	0/1:22,1:22:23.63:24,0,52	0/1:20,1:23:14.60:15,0,149	0/0:30,0:32:27.02:0,27,273	1/1:21,5:26:12.03:131,12,0	1/1:16,3:19:9.02:98,9,0	1/1:15,9:26:20.89:210,21,0	0/0:15,0:16:6.01:0,6,70	0/0:22,0:25:39.09:0,39,489	0/0:15,0:18:17.97:0,18,169	0/0:9,1:13:0.90:0,1,316
chr10	59763804	.	G	GCC	966.47	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.880;DP=699;FS=0.727;HRun=0;HaplotypeScore=97.0714;InbreedingCoeff=0.9981;MQ=88.72;MQ0=0;MQRankSum=-8.070;QD=28.43;ReadPosRankSum=0.535;VQSLOD=4.8883;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,141,2301	1/1:0,9:9:21.07:283,21,0	0/0:32,0:32:90.29:0,90,1384	0/0:22,0:22:60.15:0,60,899	0/0:26,0:25:78.27:0,78,1270	0/0:25,0:25:69.22:0,69,1100	0/0:19,0:19:54.18:0,54,877	1/1:3,11:14:36.03:484,36,0	0/0:24,0:24:72.24:0,72,1150	0/0:26,0:26:75.25:0,75,1199	0/0:19,0:19:54.17:0,54,856	0/0:27,0:27:78.27:0,78,1269	0/0:31,0:31:93.30:0,93,1490	0/0:22,0:22:66.23:0,66,1077	0/0:39,0:39:99:0,117,1883	0/0:32,0:32:93.32:0,93,1514	1/1:1,10:11:27.04:341,27,0	0/0:22,0:22:63.18:0,63,999	0/0:21,0:21:60.17:0,60,929	0/0:22,0:22:60.20:0,60,979	0/0:42,0:42:99:0,126,1977	0/0:27,0:27:78.25:0,78,1248	0/0:19,0:19:54.16:0,54,854	0/0:21,0:21:63.22:0,63,1025	0/0:27,0:27:81.28:0,81,1322	0/0:27,0:27:78.27:0,78,1272	0/0:33,0:33:96.33:0,96,1558	0/0:13,0:13:39.08:0,39,583
chr10	59763805	.	T	TA	195.69	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.931;DP=694;FS=4.821;HRun=0;HaplotypeScore=84.2673;InbreedingCoeff=0.9962;MQ=89.40;MQ0=0;MQRankSum=-7.605;QD=6.12;ReadPosRankSum=0.551;VQSLOD=3.2430;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,141,1972	1/1:0,9:9:19.08:82,19,0	0/0:32,0:32:78.27:0,78,1144	0/0:23,0:23:51.67:0,52,783	0/0:26,0:25:78.26:0,78,1088	0/0:25,0:25:72.21:0,72,970	0/0:20,0:20:57.17:0,57,779	1/1:2,11:13:31.32:163,31,0	0/0:23,0:23:69.22:0,69,950	0/0:26,0:26:75.25:0,75,1040	0/0:18,0:18:54.13:0,54,717	0/0:27,0:27:81.26:0,81,1116	0/0:32,0:32:93.30:0,93,1283	0/0:22,0:22:66.22:0,66,923	0/0:39,0:39:99:0,117,1612	0/0:32,0:32:96.31:0,96,1327	1/1:0,10:10:21.51:92,22,0	0/0:22,0:22:60.20:0,60,837	0/0:20,0:20:60.17:0,60,803	0/0:21,0:21:63.19:0,63,862	0/0:40,0:40:99:0,120,1677	0/0:27,0:27:78.25:0,78,1074	0/0:19,0:19:54.18:0,54,753	0/0:21,0:21:63.21:0,63,881	0/0:27,0:27:81.27:0,81,1132	0/0:28,0:28:78.25:0,78,1075	0/0:34,0:34:99:0,99,1337	0/0:11,0:11:33.11:0,33,460
chr10	59763806	.	TGGGTG	T	1093.80	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.057;DP=693;FS=0.000;HRun=0;HaplotypeScore=137.4024;InbreedingCoeff=0.9976;MQ=90.41;MQ0=0;MQRankSum=-7.300;QD=34.18;ReadPosRankSum=0.068;VQSLOD=3.3591;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,141,4515	1/1:0,9:9:21.07:310,21,0	0/0:32,0:32:89.79:0,90,2635	0/0:25,0:25:55.14:0,55,1872	0/0:26,0:25:78.27:0,78,2509	0/0:24,0:24:69.24:0,69,2214	0/0:21,0:21:63.20:0,63,1917	1/1:2,11:13:39.09:575,39,0	0/0:23,0:23:69.24:0,69,2179	0/0:26,0:26:78.27:0,78,2449	0/0:17,0:17:51.18:0,51,1547	0/0:27,0:27:81.28:0,81,2472	0/0:31,0:31:90.29:0,90,2741	0/0:23,0:23:69.24:0,69,2209	0/0:39,0:39:99:0,114,3425	0/0:32,0:32:93.32:0,93,2975	1/1:0,10:10:24.08:351,24,0	0/0:21,0:21:60.16:0,60,1836	0/0:20,0:20:57.18:0,57,1696	0/0:22,0:22:66.23:0,66,2025	0/0:40,0:40:99:0,120,3751	0/0:26,0:26:78.27:0,78,2448	0/0:19,0:19:57.18:0,57,1697	0/0:21,0:21:60.21:0,60,1938	0/0:28,0:28:84.29:0,84,2606	0/0:27,0:27:81.27:0,81,2467	0/0:33,0:33:96.33:0,96,3003	0/0:11,0:11:30.10:0,30,924
chr10	59766168	.	C	CT	5001.46	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-13.462;DP=427;FS=1.754;HRun=7;HaplotypeScore=38.4592;InbreedingCoeff=0.9497;MQ=75.92;MQ0=0;MQRankSum=-1.533;QD=30.87;ReadPosRankSum=1.754;VQSLOD=4.9284;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,21:25:54.17:652,54,0	0/0:9,0:9:27.04:0,27,260	0/0:7,0:8:0.37:0,0,114	0/0:11,0:11:14.65:0,15,133	1/1:1,28:29:81.25:979,81,0	1/1:3,19:22:57.17:689,57,0	1/1:0,7:7:18.06:217,18,0	0/0:20,0:20:48.05:0,48,455	1/1:0,17:17:42.13:507,42,0	0/0:13,0:13:33.05:0,33,319	0/0:18,0:18:48.08:0,48,464	1/1:1,7:8:18.06:217,18,0	1/1:0,12:12:33.10:399,33,0	0/0:14,0:14:36.06:0,36,347	0/0:8,0:8:24.04:0,24,232	0/0:22,1:23:23.85:0,24,514	0/0:16,0:16:48.08:0,48,463	1/1:0,15:15:39.12:471,39,0	0/0:12,0:12:33.05:0,33,319	0/0:28,0:28:75.10:0,75,719	0/0:6,0:6:15.02:0,15,145	1/1:1,5:6:12.04:145,12,0	1/1:1,15:16:45.14:544,45,0	1/1:0,5:5:15.05:181,15,0	0/0:11,0:11:27.04:0,27,261	0/0:26,0:26:66.09:0,66,633	0/0:26,0:26:75.12:0,75,723	0/0:16,0:16:48.05:0,48,456
chr10	59768284	.	G	GA	1267.85	PASS	AB=0.786;AC=14;AF=0.250;AN=56;BaseQRankSum=-4.665;DP=590;FS=0.000;HRun=13;HaplotypeScore=69.7804;InbreedingCoeff=0.5241;MQ=71.87;MQ0=16;MQRankSum=-0.315;QD=5.66;ReadPosRankSum=-0.701;VQSLOD=2.0165;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:19:34.26:0,34,220	0/0:11,0:11:26.78:0,27,185	0/0:52,0:18:11.06:0,11,129	0/1:30,0:14:5.70:6,0,57	0/0:23,2:25:10.71:0,11,218	1/1:6,23:33:49.03:484,49,0	0/1:7,6:13:1.31:123,0,1	0/1:23,4:26:33.09:33,0,236	0/0:18,0:19:37.22:0,37,252	0/0:18,0:19:31.64:0,32,207	0/0:19,0:20:46.57:0,47,314	1/1:7,13:20:20.90:179,21,0	0/1:10,8:19:13.96:46,0,14	0/0:16,0:17:28.67:0,29,189	0/0:16,0:18:29.96:0,30,183	0/0:10,0:10:26.74:0,27,185	0/1:23,4:29:23.04:23,0,277	0/0:19,0:21:42.61:0,43,279	0/0:22,0:27:55.42:0,55,349	0/0:20,0:21:31.61:0,32,211	0/0:10,0:10:14.81:0,15,103	1/1:7,14:21:27.82:235,28,0	1/1:8,9:17:21.02:195,21,0	0/1:4,11:15:2.56:121,0,3	0/0:18,0:20:34.69:0,35,232	0/0:16,0:17:37.64:0,38,248	0/0:21,0:22:40.56:0,41,273	0/0:14,0:17:21.77:0,22,132
chr10	59772554	.	GTGTC	G	7907.48	PASS	AC=38;AF=0.731;AN=52;BaseQRankSum=13.189;DP=770;FS=8.937;HRun=0;HaplotypeScore=148.3408;InbreedingCoeff=0.8830;MQ=58.67;MQ0=15;MQRankSum=-2.530;QD=14.73;ReadPosRankSum=1.986;VQSLOD=3.7266;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:52:21.01:189,21,0	1/1:2,0:9:12.01:112,12,0	./.	./.	1/1:10,0:34:38.75:363,39,0	0/0:23,0:23:48.14:0,48,1029	0/0:32,0:32:63.15:0,63,1186	1/1:30,0:36:6.73:24,7,0	1/1:7,0:16:15.02:140,15,0	1/1:13,19:31:54.06:753,54,0	1/1:12,15:27:30.10:469,30,0	0/0:23,1:24:7.25:0,7,1150	0/0:23,0:23:51.17:0,51,1146	1/1:10,23:33:57.19:891,57,0	1/1:10,16:26:33.11:516,33,0	1/1:15,24:39:56.98:884,57,0	1/1:16,0:31:11.61:94,12,0	1/1:14,0:22:5.26:78,5,0	1/1:23,9:31:27.09:391,27,0	1/1:10,17:27:33.11:516,33,0	1/1:13,21:33:39.13:610,39,0	0/0:21,0:21:1.87:0,2,1008	0/0:21,0:21:48.16:0,48,1094	0/0:30,1:31:19.24:0,19,1240	1/1:8,10:18:21.07:328,21,0	1/1:14,12:26:36.11:536,36,0	1/1:13,21:36:54.18:826,54,0	1/1:0,5:5:12.04:188,12,0
chr10	59773151	.	C	CTATTATTATTAT	8074.91	PASS	AC=52;AF=0.963;AN=54;BaseQRankSum=1.330;DP=272;FS=0.000;HRun=0;HaplotypeScore=86.2053;InbreedingCoeff=0.2299;MQ=58.65;MQ0=0;MQRankSum=-1.392;QD=30.47;ReadPosRankSum=0.124;VQSLOD=3.8158;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,5:8:5.85:352,6,0	1/1:3,0:3:6.01:80,6,0	1/1:3,0:3:0.47:1,0,0	0/0:5,0:5:3.01:0,3,74	1/1:8,0:8:9.03:127,9,0	1/1:7,9:20:9.03:434,9,0	1/1:2,0:2:3.01:124,3,0	1/1:51,0:50:96.24:1827,96,0	1/1:5,1:6:3.01:177,3,0	1/1:3,0:12:21.06:545,21,0	1/1:5,0:14:11.91:231,12,0	1/1:5,7:13:6.02:353,6,0	1/1:5,0:5:9.03:318,9,0	1/1:6,0:6:8.81:107,9,0	1/1:3,0:6:3.01:97,3,0	1/1:7,0:7:9.03:168,9,0	1/1:13,0:13:27.07:727,27,0	1/1:8,0:8:14.95:140,15,0	1/1:12,0:12:15.03:242,15,0	1/1:3,0:6:9.03:291,9,0	1/1:7,0:7:5.21:31,5,0	./.	1/1:3,0:3:6.02:248,6,0	1/1:3,0:3:3.01:65,3,0	1/1:4,0:11:18.06:581,18,0	1/1:4,0:9:12.03:231,12,0	1/1:8,0:13:9.03:290,9,0	1/1:8,0:16:9.03:291,9,0
chr10	59775524	.	G	GCAAA	6595.50	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-11.725;DP=629;FS=8.942;HRun=0;HaplotypeScore=99.6952;InbreedingCoeff=0.9978;MQ=72.90;MQ0=0;MQRankSum=-2.523;QD=55.89;ReadPosRankSum=3.262;VQSLOD=6.4011;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,37:45:99:2511,102,0	0/0:18,0:18:48.16:0,48,815	0/0:29,0:27:45.15:0,45,749	0/0:16,0:16:24.07:0,24,359	1/1:5,24:30:75.26:1860,75,0	0/0:22,0:22:54.17:0,54,890	0/0:13,0:13:33.10:0,33,533	0/0:36,0:36:84.28:0,84,1396	1/1:4,15:20:51.18:1271,51,0	0/0:19,0:19:42.14:0,42,690	0/0:27,0:27:72.25:0,72,1206	0/0:26,0:26:69.22:0,69,1145	0/0:23,0:23:69.22:0,69,1134	0/0:24,0:24:60.19:0,60,989	0/0:12,0:12:27.09:0,27,456	0/0:22,0:22:54.18:0,54,916	0/0:25,0:25:51.13:0,51,865	1/1:8,13:23:39.13:953,39,0	0/0:25,0:25:53.85:0,54,774	0/0:22,0:23:57.16:0,57,892	0/0:15,0:15:33.11:0,33,560	0/0:20,0:20:45.15:0,45,752	0/0:23,0:23:60.21:0,60,1018	0/0:8,0:8:21.07:0,21,356	0/0:21,0:20:51.17:0,51,866	0/0:30,0:30:81.26:0,81,1323	0/0:18,0:18:51.17:0,51,855	0/0:16,0:16:45.15:0,45,761
chr10	59776830	.	A	AGGAAT	52848.85	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-5.167;DP=800;FS=1.788;HRun=0;HaplotypeScore=154.3843;InbreedingCoeff=0.9958;MQ=80.04;MQ0=0;MQRankSum=-11.884;QD=71.51;ReadPosRankSum=5.351;VQSLOD=5.9912;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,36:49:99:3101,117,0	1/1:2,12:16:41.78:1169,42,0	0/0:31,0:31:78.25:0,78,1502	0/0:30,0:30:75.22:0,75,1397	1/1:3,16:20:48.16:1304,48,0	1/1:4,19:25:66.18:1824,66,0	1/1:9,18:27:69.23:1848,69,0	1/1:13,21:35:96.31:2618,96,0	1/1:5,23:29:72.25:2182,72,0	1/1:9,25:38:99:2966,105,0	1/1:6,27:34:90.31:2439,90,0	1/1:4,28:34:87.30:2584,87,0	1/1:10,25:37:93.28:2564,93,0	1/1:5,23:31:72.20:2078,72,0	1/1:4,41:48:99:3740,126,0	1/1:3,23:26:63.22:1914,63,0	1/1:3,14:18:39.13:1027,39,0	1/1:1,5:6:18.06:534,18,0	1/1:15,15:31:75.23:2137,75,0	1/1:4,31:35:93.32:2673,93,0	1/1:7,21:29:63.21:1592,63,0	1/1:5,18:25:57.19:1579,57,0	1/1:8,21:32:78.05:2097,78,0	1/1:6,14:22:54.18:1454,54,0	1/1:1,23:24:63.22:1841,63,0	1/1:2,21:23:69.24:2088,69,0	1/1:3,22:26:72.25:2151,72,0	1/1:2,15:18:45.15:1347,45,0
chr10	59777059	.	GATAA	G	30789.75	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-0.846;DP=653;FS=0.000;HRun=0;HaplotypeScore=143.6969;InbreedingCoeff=0.9990;MQ=80.88;MQ0=0;MQRankSum=-10.300;QD=50.31;ReadPosRankSum=6.356;VQSLOD=5.2472;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,23:24:51.17:995,51,0	1/1:0,10:10:26.97:539,27,0	0/0:13,0:13:33.11:0,33,878	0/0:28,0:28:81.24:0,81,2035	1/1:1,30:31:69.19:1337,69,0	1/1:1,32:33:84.29:1677,84,0	1/1:1,29:30:72.20:1373,72,0	1/1:1,22:23:63.20:1196,63,0	1/1:1,12:13:33.07:619,33,0	1/1:0,33:33:99:1941,99,0	1/1:2,20:22:51.17:1018,51,0	1/1:1,20:21:57.15:1098,57,0	1/1:0,30:30:81.28:1617,81,0	1/1:2,28:30:78.22:1516,78,0	1/1:1,25:26:63.22:1258,63,0	1/1:0,20:20:54.19:1078,54,0	1/1:1,20:21:54.15:1078,54,0	1/1:1,14:15:33.58:640,34,0	1/1:0,15:15:45.12:816,45,0	1/1:1,35:36:96.33:1895,96,0	1/1:1,19:20:51.18:1017,51,0	1/1:1,25:26:66.23:1317,66,0	1/1:1,24:25:63.22:1256,63,0	1/1:2,25:27:63.22:1259,63,0	1/1:2,14:16:39.13:778,39,0	1/1:2,25:27:75.23:1436,75,0	1/1:0,21:21:60.21:1197,60,0	1/1:1,16:17:42.14:838,42,0
chr10	59779002	.	TAA	T	5294.94	PASS	AB=0.630;AC=25;AF=0.446;AN=56;BaseQRankSum=-6.327;DP=587;FS=9.143;HRun=13;HaplotypeScore=86.0669;InbreedingCoeff=0.8289;MQ=73.11;MQ0=1;MQRankSum=-0.756;QD=20.44;ReadPosRankSum=1.281;VQSLOD=3.8110;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:6,1:20:1.87:0,2,100	0/0:13,0:16:32.59:0,33,416	0/0:15,0:15:12.40:0,12,143	0/0:10,0:10:0.23:0,0,122	0/0:3,2:31:17.11:0,17,241	0/0:4,0:26:49.91:0,50,171	0/1:7,1:17:21.24:21,0,83	0/0:37,0:40:80.20:0,80,1029	0/0:4,0:19:35.44:0,35,137	1/1:8,20:28:56.99:548,57,0	1/1:4,19:23:36.79:504,37,0	0/0:3,1:20:14.34:0,14,126	0/0:7,1:22:12.34:0,12,132	1/1:1,8:10:14.92:145,15,0	1/1:5,20:25:54.04:524,54,0	1/1:5,16:22:41.96:457,42,0	0/0:27,0:27:78.21:0,78,1070	0/0:7,0:25:39.93:0,40,137	1/1:3,18:23:50.73:527,51,0	1/1:3,22:25:63.04:608,63,0	1/1:3,10:13:27:262,27,0	0/0:4,0:20:35.78:0,36,158	0/0:6,1:16:5.17:0,5,136	0/0:6,0:18:17.34:0,17,59	1/1:3,12:16:27.01:312,27,0	1/1:3,22:25:69.07:661,69,0	1/1:4,22:26:63.09:611,63,0	1/1:2,4:6:11.98:116,12,0
chr10	59780703	.	T	TTCTCTCTCTC	6806.28	PASS	AC=50;AF=0.926;AN=54;BaseQRankSum=1.565;DP=705;FS=2.586;HRun=0;HaplotypeScore=256.9014;InbreedingCoeff=0.3672;MQ=65.24;MQ0=14;MQRankSum=-1.113;QD=11.01;ReadPosRankSum=-0.191;VQSLOD=3.7942;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:18:2.98:22,3,0	1/1:8,5:15:11.76:291,12,0	0/0:32,0:23:3.01:0,3,60	0/0:39,0:27:2.84:0,3,144	1/1:28,0:28:6:96,6,0	1/1:16,0:15:0.47:1,0,0	1/1:21,0:20:9.01:122,9,0	1/1:52,0:48:42.43:633,42,0	1/1:21,0:18:11.39:387,11,0	1/1:39,0:38:56.48:1139,56,0	1/1:23,0:22:6.02:153,6,0	1/1:21,0:20:21.53:588,22,0	1/1:31,1:29:32.33:832,32,0	1/1:24,0:24:3.01:48,3,0	1/1:25,0:22:3.48:50,3,0	1/1:25,0:23:9.16:128,9,0	1/1:15,9:24:11.83:324,12,0	1/1:12,0:12:3.01:125,3,0	1/1:19,0:19:3.47:27,3,0	1/1:24,0:23:0.47:2,0,0	1/1:21,0:18:3:25,3,0	1/1:21,0:20:5.99:95,6,0	1/1:21,0:20:0.46:1,0,0	./.	1/1:29,0:29:9.03:171,9,0	1/1:37,0:35:38.91:833,39,0	1/1:26,0:25:18.52:409,19,0	1/1:17,0:17:11.83:306,12,0
chr10	59780731	.	CTGTGTGTGTGTGT	C	2537.10	PASS	AB=0.808;AC=11;AF=0.196;AN=56;BaseQRankSum=-0.816;DP=554;FS=41.109;HRun=0;HaplotypeScore=223.5085;InbreedingCoeff=-0.0147;MQ=39.81;MQ0=19;MQRankSum=-3.689;QD=14.33;ReadPosRankSum=1.844;VQSLOD=1.3840;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:29.05:0,29,1323	0/0:19,0:18:18.06:0,18,718	0/0:5,0:1:2.88:0,3,15	0/0:12,0:4:12.04:0,12,322	0/0:11,0:11:27.05:0,27,1320	0/0:23,0:17:27.19:0,27,1424	0/0:23,0:21:48.12:0,48,2138	0/0:38,0:32:87.11:0,87,2116	0/0:23,0:20:15.01:0,15,398	0/1:24,6:32:99:1012,0,229	0/0:12,0:11:5.83:0,6,78	0/0:27,0:26:47.11:0,47,2028	0/0:33,0:31:33.10:0,33,1245	0/0:13,3:16:2.99:0,3,25	0/1:16,7:20:16.97:113,0,17	0/1:23,1:21:85.96:120,0,86	0/0:27,0:26:35.96:0,36,1081	0/0:14,0:13:20.96:0,21,543	0/1:5,0:9:18.82:208,0,19	1/1:12,1:12:2.75:100,3,0	0/0:13,0:13:6:0,6,62	0/0:15,0:14:8.02:0,8,66	1/1:16,0:15:0.32:1,0,0	0/0:12,0:8:11.07:0,11,534	0/0:17,12:29:9.01:0,9,102	0/1:21,9:27:99:605,0,246	0/1:16,4:19:99:281,0,187	0/1:6,1:7:99:232,0,136
chr10	59780734	.	TGTGTGTGTG	T	1869.72	PASS	AB=0.990;AC=13;AF=0.241;AN=54;BaseQRankSum=1.269;DP=443;FS=45.731;HRun=0;HaplotypeScore=178.8465;InbreedingCoeff=0.2732;MQ=41.97;MQ0=22;MQRankSum=-6.409;QD=13.17;ReadPosRankSum=3.127;VQSLOD=0.9519;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:23.07:0,23,982	0/0:19,0:18:17.65:0,18,513	0/0:7,0:3:9.03:0,9,313	0/0:15,0:7:21.07:0,21,694	0/0:10,0:10:30.05:0,30,1216	0/0:18,0:15:29.60:0,30,1210	0/0:18,0:16:42.08:0,42,1689	0/0:43,0:35:96.25:0,96,2368	0/0:21,0:19:11.58:0,12,255	0/1:28,0:27:54.48:785,0,54	0/0:8,0:7:5.70:0,6,53	0/0:23,0:22:49.73:0,50,1751	0/0:21,0:18:32.73:0,33,880	0/1:9,0:9:0:0,0,1	1/1:16,2:17:3.48:87,3,0	0/1:15,0:13:45.04:141,0,45	0/0:21,0:20:26.97:0,27,755	0/0:10,0:9:12.04:0,12,394	1/1:7,0:6:14.35:66,14,0	1/1:10,1:9:3.01:69,3,0	./.	0/0:10,0:9:4.80:0,5,25	0/1:14,0:14:0:2,0,0	0/0:12,0:8:14.08:0,14,534	0/0:23,1:23:8.77:0,9,51	0/1:20,0:19:27.16:453,0,27	0/1:13,1:14:56.03:235,0,56	0/1:6,0:6:64.53:178,0,65
chr10	59780736	.	TGTGTGTG	T	1466.28	PASS	AB=0.970;AC=13;AF=0.241;AN=54;BaseQRankSum=3.863;DP=438;FS=35.251;HRun=0;HaplotypeScore=170.6661;InbreedingCoeff=0.1509;MQ=41.92;MQ0=21;MQRankSum=-5.424;QD=9.28;ReadPosRankSum=3.038;VQSLOD=1.3054;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:23.11:0,23,814	0/0:19,0:18:14.97:0,15,424	0/0:7,0:3:9.03:0,9,295	0/0:16,0:8:24.08:0,24,660	0/0:11,0:11:33.03:0,33,1073	0/0:19,0:16:32.81:0,33,1073	0/0:16,0:14:39.13:0,39,1390	0/0:42,0:34:96.26:0,96,2070	0/0:21,0:19:11.65:0,12,218	0/1:24,1:26:53.27:579,0,53	0/0:8,0:7:5.58:0,6,48	0/0:24,0:23:55.75:0,56,1605	0/0:21,0:18:29.75:0,30,708	0/1:8,0:8:0:0,0,1	1/1:16,1:16:3.48:72,3,0	0/1:14,1:13:35.89:142,0,36	0/0:21,0:20:26.96:0,27,624	0/0:10,0:10:12.04:0,12,341	0/1:8,0:7:46.65:79,0,47	1/1:10,0:8:3.01:50,3,0	./.	0/0:10,0:9:4.68:0,5,23	0/1:14,0:14:0:2,0,0	0/0:13,0:9:17.09:0,17,509	0/1:23,0:22:0:0,0,0	0/1:19,0:18:23.70:327,0,24	0/1:11,0:11:23.55:191,0,24	0/1:5,1:6:47.57:159,0,48
chr10	59780740	.	TGTG	T	721.12	PASS	AB=0.957;AC=15;AF=0.278;AN=54;BaseQRankSum=6.195;DP=434;FS=29.522;HRun=0;HaplotypeScore=155.9194;InbreedingCoeff=0.2892;MQ=42.32;MQ0=19;MQRankSum=-6.012;QD=5.26;ReadPosRankSum=2.856;VQSLOD=0.9404;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:22.97:0,23,485	0/0:18,0:17:14.59:0,15,264	0/0:6,0:4:12.04:0,12,198	0/0:16,0:9:27.09:0,27,459	0/0:11,0:11:33.11:0,33,647	0/0:19,0:16:33.47:0,33,633	0/0:18,0:16:42.14:0,42,877	0/0:44,0:36:99:0,105,1566	0/0:21,0:19:11.57:0,12,150	0/1:24,0:23:92.81:299,0,93	0/1:7,0:6:0:0,0,0	0/0:25,0:24:59.06:0,59,1023	0/0:18,0:16:23.92:0,24,406	0/1:7,1:8:0:0,0,1	1/1:16,0:15:3.48:44,3,0	0/1:14,1:13:19.27:68,0,19	0/0:22,0:21:30.03:0,30,451	0/0:10,0:10:12.04:0,12,218	0/1:6,1:7:59.15:59,0,139	1/1:11,0:9:6:58,6,0	./.	0/0:10,0:9:4.58:0,5,43	1/1:14,0:14:0.18:2,0,0	0/0:13,0:9:17.09:0,17,295	0/0:20,1:20:0:0,0,0	0/1:19,0:18:35.67:155,0,36	1/1:10,0:10:3.22:93,3,0	0/1:6,0:6:11.08:82,0,11
chr10	59780744	.	T	TC	1500.21	PASS	AB=0.813;AC=17;AF=0.304;AN=56;BaseQRankSum=8.427;DP=484;FS=5.319;HRun=0;HaplotypeScore=169.3026;InbreedingCoeff=0.4565;MQ=42.67;MQ0=20;MQRankSum=-7.879;QD=7.98;ReadPosRankSum=3.055;VQSLOD=3.6008;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:28.64:0,29,349	0/0:17,0:16:14.84:0,15,176	0/0:5,0:4:12.04:0,12,166	0/0:15,0:9:27.07:0,27,357	0/0:16,0:16:48.13:0,48,581	0/0:20,0:16:33.34:0,33,391	0/0:19,0:17:42.14:0,42,538	0/0:46,0:38:99:0,114,1545	0/0:21,0:19:8.04:0,8,79	0/1:18,6:25:69.47:443,0,69	0/1:8,2:9:0:0,0,0	0/0:27,0:26:61.61:0,62,698	0/0:19,0:17:24.50:0,25,267	0/1:11,1:12:34.35:39,0,34	1/1:19,2:20:2.93:25,3,0	0/1:10,1:17:27.44:97,0,27	0/0:24,0:23:29.89:0,30,357	0/0:10,0:10:12.03:0,12,143	0/1:7,1:7:90.17:90,0,104	1/1:10,4:12:6.02:89,6,0	0/1:9,4:9:0:0,0,0	0/0:10,0:9:4.56:0,5,45	0/0:15,0:15:2.93:0,3,31	0/0:14,0:10:19.61:0,20,233	0/1:17,3:20:0:0,0,0	1/1:22,4:26:22.44:586,22,0	1/1:9,0:11:14.39:137,14,0	1/1:6,0:6:17.62:158,18,0
chr10	59780745	.	G	GTA	2725.27	PASS	AB=0.835;AC=21;AF=0.375;AN=56;BaseQRankSum=-2.086;DP=495;FS=7.712;HRun=0;HaplotypeScore=171.0842;InbreedingCoeff=0.4634;MQ=43.16;MQ0=20;MQRankSum=6.439;QD=10.69;ReadPosRankSum=2.649;VQSLOD=2.7036;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:19:26.68:362,27,0	0/1:17,0:16:16.80:25,0,17	0/0:6,0:5:12:0,12,107	0/0:17,0:10:26.99:0,27,245	1/1:16,0:16:48.03:545,48,0	1/1:21,0:17:33.27:427,33,0	1/1:19,0:17:28.50:512,29,0	0/0:47,0:39:99:0,101,707	0/1:8,13:19:8.90:53,0,9	0/0:26,0:25:62.12:0,62,423	0/1:10,0:9:0:0,0,0	1/1:28,0:27:41.96:494,42,0	0/1:9,10:17:10.22:133,0,10	0/0:13,0:13:5.87:0,6,41	0/0:21,0:20:2.99:0,3,29	0/0:19,0:17:14.49:0,14,98	0/1:22,1:22:53.92:54,0,73	0/1:4,6:11:11.26:69,0,11	0/0:8,0:7:15.88:0,16,103	0/0:15,0:13:8.74:0,9,56	0/0:13,0:10:0:0,0,0	0/0:4,6:9:2.60:0,3,10	1/1:5,9:15:2.49:23,2,0	1/1:14,0:10:17.99:208,18,0	0/1:22,0:21:0.03:0,0,0	0/0:28,0:26:55.08:0,55,417	0/0:11,0:11:14.35:0,14,108	0/0:6,0:6:13.21:0,13,82
chr10	59780746	.	T	TC	181.05	PASS	AB=0.892;AC=5;AF=0.089;AN=56;BaseQRankSum=5.362;DP=509;FS=9.347;HRun=0;HaplotypeScore=178.6087;InbreedingCoeff=-0.0504;MQ=43.30;MQ0=21;MQRankSum=-5.463;QD=2.16;ReadPosRankSum=1.481;VQSLOD=2.4320;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:31.45:0,31,265	0/0:17,0:16:14.88:0,15,177	0/0:8,0:6:15.05:0,15,206	0/0:18,0:11:30.10:0,30,411	0/0:16,0:16:47.93:0,48,505	0/0:21,0:17:39.64:0,40,321	0/0:19,0:17:44.76:0,45,395	0/0:48,0:40:99:0,116,1551	0/0:22,0:20:9.30:0,9,78	0/1:27,0:26:83.96:84,0,280	0/1:8,0:9:0:0,0,0	0/0:28,0:27:64.65:0,65,615	0/0:19,0:17:24.95:0,25,218	0/0:15,0:15:5.53:0,6,65	0/0:23,0:22:2.98:0,3,22	0/0:20,0:18:10.13:0,10,100	0/0:23,0:22:29.92:0,30,372	0/0:11,0:11:11.50:0,11,101	0/0:8,0:7:7.54:0,8,131	0/0:15,0:13:6.72:0,7,67	0/0:13,0:10:2.98:0,3,24	0/0:11,0:10:4.56:0,5,43	0/0:15,0:15:2.93:0,3,41	0/0:14,0:10:19.52:0,20,188	0/0:22,0:21:2.56:0,3,25	0/1:27,1:27:69.02:69,0,243	0/1:10,1:11:29.01:29,0,78	0/1:4,2:7:38.89:106,0,39
chr10	59780747	.	G	GTA	1354.18	PASS	AB=0.943;AC=14;AF=0.250;AN=56;BaseQRankSum=1.198;DP=515;FS=3.409;HRun=0;HaplotypeScore=182.7979;InbreedingCoeff=-0.1070;MQ=43.53;MQ0=20;MQRankSum=3.831;QD=5.79;ReadPosRankSum=8.035;VQSLOD=2.6432;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:16,4:20:8.97:193,0,9	0/1:18,0:17:17.22:24,0,17	0/0:8,0:6:18.01:0,18,174	0/0:18,0:11:33.02:0,33,316	0/1:16,0:16:32.14:201,0,32	0/1:20,2:18:24.79:256,0,25	0/1:19,0:17:12.97:277,0,13	0/0:46,0:39:99:0,106,733	0/1:20,2:20:27.79:28,0,31	0/0:27,0:26:73.42:0,73,561	0/1:10,0:9:0:0,0,0	0/1:28,0:27:41.85:248,0,42	1/1:18,1:17:18.05:160,18,0	0/0:15,0:15:8.95:0,9,72	0/0:23,0:22:2.99:0,3,30	0/0:19,1:18:17.83:0,18,138	0/1:23,0:22:3.88:4,0,74	0/1:11,1:12:27.72:28,0,39	0/0:8,0:7:17.11:0,17,122	0/0:17,0:15:11.90:0,12,89	0/0:13,0:10:3:0,3,25	0/1:9,2:10:18.58:19,0,19	0/0:14,2:16:2.36:0,2,10	0/1:12,2:10:13.06:66,0,13	0/0:23,0:22:0.07:0,0,20	0/0:29,0:27:67.39:0,67,555	0/0:11,0:11:17.66:0,18,127	0/0:7,0:7:20.06:0,20,146
chr10	59780763	.	G	GTC	5275.60	PASS	AB=0.889;AC=27;AF=0.482;AN=56;BaseQRankSum=-0.065;DP=589;FS=14.959;HRun=0;HaplotypeScore=168.8528;InbreedingCoeff=0.7852;MQ=56.67;MQ0=16;MQRankSum=6.592;QD=16.13;ReadPosRankSum=3.266;VQSLOD=3.8236;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,4:23:41.60:489,42,0	1/1:16,0:16:6.01:133,6,0	0/0:22,0:17:48.09:0,48,489	0/0:33,0:25:65.61:0,66,654	1/1:21,0:21:60.02:654,60,0	1/1:23,2:22:44.17:580,44,0	1/1:22,0:21:34.12:599,34,0	0/1:25,17:39:20.34:711,0,20	1/1:25,2:25:13.16:145,13,0	0/0:33,0:32:85.31:0,85,701	0/1:7,0:7:0:0,0,0	1/1:32,0:32:54.77:743,55,0	0/1:21,1:21:2.63:202,0,3	0/0:17,0:17:8.96:0,9,74	0/0:24,0:23:8.99:0,9,77	0/0:19,1:18:15.88:0,16,134	1/1:23,1:24:33.38:343,33,0	1/1:15,1:16:20.02:178,20,0	0/0:10,0:8:20.91:0,21,171	0/0:15,0:14:14.90:0,15,115	0/0:11,0:8:8.98:0,9,73	1/1:9,2:11:5.91:48,6,0	1/1:19,2:21:20.42:166,20,0	1/1:13,2:13:26.99:285,27,0	0/0:25,0:24:8.88:0,9,76	0/0:31,0:29:76.65:0,77,565	0/0:15,0:15:17.83:0,18,140	0/0:6,0:6:15.34:0,15,120
chr10	59781913	.	C	CA	3026.17	PASS	AB=0.758;AC=28;AF=0.500;AN=56;BaseQRankSum=-1.918;DP=483;FS=1.829;HRun=12;HaplotypeScore=51.6870;InbreedingCoeff=0.8003;MQ=64.41;MQ0=8;MQRankSum=-1.089;QD=11.55;ReadPosRankSum=-0.634;VQSLOD=2.8708;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:13,26:38:31.35:524,0,31	1/1:2,4:5:12.02:117,12,0	0/0:9,0:8:5.95:0,6,87	0/0:9,0:7:9.11:0,9,57	1/1:3,14:18:41.65:349,42,0	1/1:5,0:13:14.20:71,14,0	1/1:1,1:6:11.36:57,11,0	1/1:11,19:30:13.88:466,14,0	1/1:1,4:5:6.01:58,6,0	0/0:17,0:15:22.83:0,23,159	0/0:22,1:23:30.45:0,30,385	1/1:1,0:7:8.52:43,9,0	1/1:5,0:9:8.78:90,9,0	0/0:14,0:14:32.79:0,33,238	0/0:22,2:25:24.26:0,24,331	0/0:13,0:13:23.68:0,24,175	1/1:4,23:28:33.51:446,34,0	1/1:5,29:34:60.10:584,60,0	0/0:19,0:21:37.53:0,38,264	0/1:20,2:21:4.70:5,0,294	0/0:15,0:15:38.77:0,39,285	1/1:6,0:14:20.10:108,20,0	1/1:8,2:17:41.69:254,42,0	1/1:3,1:12:14.20:71,14,0	0/0:18,0:18:47.63:0,48,345	0/0:18,0:18:43.54:0,44,311	0/0:24,1:26:58.67:0,59,421	0/0:12,0:11:14.88:0,15,109
chr10	59783994	.	GGAAAAAA	G	4725.50	PASS	AB=0.949;AC=39;AF=0.696;AN=56;BaseQRankSum=-7.879;DP=545;FS=21.002;HRun=0;HaplotypeScore=105.1520;InbreedingCoeff=-0.1045;MQ=59.77;MQ0=58;MQRankSum=2.564;QD=12.15;ReadPosRankSum=1.840;VQSLOD=2.2501;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:12,0:12:18.94:218,19,0	0/1:2,0:4:5.82:6,0,14	0/0:74,0:22:40.30:0,40,457	0/0:81,0:20:41.99:0,42,260	1/1:16,3:18:19.89:394,20,0	1/1:12,0:13:17.70:275,18,0	1/1:9,1:14:41.92:467,42,0	0/1:12,0:11:50.98:158,0,51	1/1:16,0:16:22.79:254,23,0	0/1:12,0:12:11.46:225,0,11	0/1:25,0:24:77.98:222,0,78	1/1:14,1:14:15.41:157,15,0	1/1:14,0:13:20.31:249,20,0	0/1:12,0:10:49.08:49,0,59	0/1:15,0:15:26.52:88,0,27	0/1:11,0:10:41.55:42,0,42	0/1:29,0:25:99:173,0,169	1/1:17,0:15:3.43:233,3,0	0/1:18,0:12:44.31:191,0,44	0/1:13,0:11:70.36:70,0,104	1/1:4,0:4:12:104,12,0	1/1:10,0:10:21.12:165,21,0	1/1:7,0:8:12.12:193,12,0	1/1:12,0:11:7.31:164,7,0	0/1:14,0:13:76.11:94,0,76	1/1:13,1:13:13.22:237,13,0	0/1:32,0:29:97.94:217,0,98	0/1:16,0:9:28.96:81,0,29
chr10	59784130	.	G	GTGTTGTGGTT	26828.90	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-7.654;DP=605;FS=10.978;HRun=0;HaplotypeScore=146.7665;InbreedingCoeff=0.9457;MQ=70.10;MQ0=6;MQRankSum=-13.036;QD=60.84;ReadPosRankSum=-1.091;VQSLOD=4.0764;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:85.96:0,86,3084	1/1:7,7:7:6.02:307,6,0	0/0:25,0:21:42.07:0,42,1019	0/0:29,0:28:56.84:0,57,1397	0/0:25,0:23:54.24:0,54,1498	1/1:15,7:23:24.08:1163,24,0	1/1:13,6:18:27.09:1256,27,0	1/1:14,4:17:24:724,24,0	0/0:17,0:17:39.13:0,39,1185	1/1:15,10:23:39.08:1439,39,0	1/1:16,7:16:20.23:975,20,0	1/1:5,11:18:24.08:1204,24,0	1/1:8,14:22:48.16:2224,48,0	1/1:5,14:21:36.12:1839,36,0	1/1:12,11:23:42.14:2041,42,0	1/1:5,8:13:21.07:1034,21,0	1/1:14,7:21:29.89:1332,30,0	0/0:21,0:21:51.17:0,51,1524	1/1:12,4:16:26.59:1432,27,0	1/1:21,11:23:36.12:1514,36,0	1/1:12,0:10:12:377,12,0	1/1:20,8:21:24.08:1146,24,0	1/1:10,11:19:33.11:1636,33,0	1/1:12,3:15:12.04:528,12,0	1/1:13,0:9:12.04:434,12,0	1/1:9,13:22:45.13:1874,45,0	1/1:11,15:28:39.13:1969,39,0	1/1:7,2:8:9.03:379,9,0
chr10	59785476	.	T	TTTTA	14772.61	PASS	AB=1.000;AC=53;AF=0.946;AN=56;BaseQRankSum=-5.719;DP=465;FS=8.780;HRun=0;HaplotypeScore=79.1884;InbreedingCoeff=0.4089;MQ=65.52;MQ0=5;MQRankSum=-1.347;QD=34.43;ReadPosRankSum=3.006;VQSLOD=4.4798;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:22,5:27:57.18:1298,57,0	1/1:7,0:7:15.03:322,15,0	0/0:36,0:11:4.28:0,4,264	0/1:34,0:14:36.39:36,0,207	1/1:12,3:15:23.80:434,24,0	1/1:18,0:18:23.80:465,24,0	1/1:14,1:15:26.88:514,27,0	1/1:20,1:21:47.68:622,48,0	1/1:10,3:13:30.10:668,30,0	1/1:20,1:21:47.98:813,48,0	1/1:10,4:13:20.96:394,21,0	1/1:10,3:13:18.06:405,18,0	1/1:11,1:12:14.26:269,14,0	1/1:16,0:15:27.08:564,27,0	1/1:14,1:15:32.84:652,33,0	1/1:3,2:5:12.04:275,12,0	1/1:24,1:25:48.16:1103,48,0	1/1:18,0:18:32.66:635,33,0	1/1:4,13:17:42.03:687,42,0	1/1:11,3:14:32.96:603,33,0	1/1:16,2:18:36.12:789,36,0	1/1:2,0:2:3:61,3,0	1/1:12,2:13:15.51:262,16,0	1/1:15,1:15:20.65:449,21,0	1/1:15,2:17:27.07:576,27,0	1/1:16,2:18:54.09:1027,54,0	1/1:17,0:17:22.29:429,22,0	1/1:7,0:7:18.06:420,18,0
chr10	59785477	.	T	TTTA	11572.80	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-4.512;DP=467;FS=10.494;HRun=0;HaplotypeScore=83.8892;InbreedingCoeff=0.6606;MQ=65.58;MQ0=5;MQRankSum=-0.532;QD=29.15;ReadPosRankSum=2.637;VQSLOD=4.4407;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:27,1:28:54.24:966,54,0	1/1:7,0:7:15.03:250,15,0	0/0:36,0:11:5.91:0,6,236	0/0:34,0:14:1.17:0,1,171	1/1:13,0:13:23.65:353,24,0	1/1:7,12:22:21.48:416,21,0	1/1:2,10:16:27.01:465,27,0	1/1:21,0:21:43.14:525,43,0	1/1:13,0:13:30.10:508,30,0	1/1:21,0:21:47.98:656,48,0	1/1:14,0:13:20.96:337,21,0	1/1:3,10:13:18.06:348,18,0	1/1:2,9:12:13.86:243,14,0	1/1:16,0:15:27.08:427,27,0	1/1:15,0:15:12.83:472,13,0	1/1:6,0:6:12.04:206,12,0	1/1:24,0:24:48.16:808,48,0	1/1:17,0:17:24.74:461,25,0	1/1:15,0:15:35.95:455,36,0	1/1:14,0:14:32.80:480,33,0	1/1:19,0:19:36.12:599,36,0	1/1:1,1:2:3:61,3,0	1/1:3,10:13:15.04:240,15,0	1/1:3,11:15:21.03:424,21,0	1/1:17,0:17:27.07:449,27,0	1/1:17,0:18:53.88:777,54,0	1/1:17,0:17:22.18:340,22,0	1/1:7,0:7:18.06:307,18,0
chr10	59785478	.	T	TTA	9044.81	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-2.086;DP=469;FS=0.796;HRun=0;HaplotypeScore=87.7124;InbreedingCoeff=0.6771;MQ=65.60;MQ0=5;MQRankSum=0.185;QD=22.73;ReadPosRankSum=4.649;VQSLOD=5.0218;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,19:28:50.62:819,51,0	1/1:1,6:7:15.03:245,15,0	0/0:36,0:11:12.93:0,13,200	0/0:35,0:14:11.60:0,12,165	1/1:4,9:13:4.98:263,5,0	1/1:21,1:22:6.09:186,6,0	1/1:15,1:16:23.41:220,23,0	1/1:5,16:21:35.33:482,35,0	1/1:3,10:13:30.10:446,30,0	1/1:4,15:22:46.10:610,46,0	1/1:6,9:14:15.18:268,15,0	1/1:13,0:13:18.01:177,18,0	1/1:12,0:12:11.10:106,11,0	1/1:2,13:14:27.06:406,27,0	1/1:5,10:16:9.24:391,9,0	1/1:2,4:6:12.04:164,12,0	1/1:4,20:24:48.16:724,48,0	1/1:2,16:18:5.01:378,5,0	1/1:14,0:14:21.08:294,21,0	1/1:3,11:14:32.91:376,33,0	1/1:3,16:19:36.11:523,36,0	1/1:1,0:1:3.01:41,3,0	1/1:14,0:13:11.12:87,11,0	1/1:16,0:15:20.71:182,21,0	1/1:5,11:17:27.07:411,27,0	1/1:3,15:18:51.85:634,52,0	1/1:2,15:17:22.29:326,22,0	1/1:0,7:7:18.06:286,18,0
chr10	59785479	.	T	TA	2564.06	PASS	AB=1.000;AC=44;AF=0.786;AN=56;BaseQRankSum=1.900;DP=449;FS=5.516;HRun=0;HaplotypeScore=104.1788;InbreedingCoeff=0.1207;MQ=66.52;MQ0=5;MQRankSum=-0.812;QD=6.80;ReadPosRankSum=7.400;VQSLOD=2.6670;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:29:23.32:212,23,0	1/1:7,0:7:5.37:54,5,0	0/0:36,0:11:24.59:0,25,204	0/0:36,0:15:20.27:0,20,196	0/1:12,0:12:20.81:82,0,21	0/1:22,0:22:47.80:48,0,78	1/1:16,0:16:1.51:56,2,0	0/1:15,0:15:12.17:163,0,12	1/1:12,0:12:28.07:137,28,0	1/1:20,0:20:35.84:268,36,0	1/1:14,0:13:10.55:94,11,0	1/1:13,0:13:15.81:65,16,0	0/1:12,0:12:2.43:30,0,2	1/1:14,1:14:25.16:124,25,0	0/1:16,0:16:5.78:82,0,6	1/1:5,0:5:10.98:48,11,0	1/1:23,1:24:43.14:214,43,0	0/1:16,0:16:8.74:79,0,9	0/1:10,0:10:17.38:72,0,17	1/1:13,0:13:15.67:136,16,0	1/1:19,0:19:13.93:135,14,0	1/1:1,0:1:2.98:21,3,0	0/1:15,0:14:6.99:22,0,7	1/1:15,1:15:18.83:82,19,0	1/1:15,1:16:5.41:125,5,0	1/1:19,0:19:20.72:207,21,0	1/1:13,0:13:20.25:91,20,0	1/1:7,0:7:16.47:75,16,0
chr10	59785483	.	TGG	T	3859.93	PASS	AB=1.000;AC=40;AF=0.741;AN=54;BaseQRankSum=-5.138;DP=425;FS=2.170;HRun=12;HaplotypeScore=103.9103;InbreedingCoeff=0.7286;MQ=64.81;MQ0=5;MQRankSum=-2.832;QD=12.87;ReadPosRankSum=2.519;VQSLOD=2.6378;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:27:42.89:355,43,0	1/1:7,0:7:17.82:138,18,0	0/0:36,0:11:15.22:0,15,136	0/0:37,0:15:21.79:0,22,156	1/1:13,0:13:18.02:168,18,0	0/1:20,0:20:23.89:24,0,86	0/0:15,0:15:4.57:0,5,98	1/1:9,1:10:20.73:168,21,0	1/1:12,0:12:23.55:180,24,0	1/1:15,1:17:35.51:267,36,0	1/1:14,0:13:17.56:144,18,0	0/0:12,0:12:10.54:0,11,55	0/0:10,0:10:10.39:0,10,53	1/1:12,1:12:29.79:242,30,0	1/1:15,2:17:32.90:289,33,0	1/1:6,0:6:8.75:75,9,0	1/1:22,0:22:47.70:410,48,0	1/1:14,0:14:13.32:218,13,0	1/1:10,0:10:10.77:82,11,0	1/1:11,0:11:14.80:112,15,0	1/1:19,0:19:29.24:234,29,0	./.	0/1:19,0:18:12.98:13,0,53	0/0:14,0:13:15.70:0,16,102	1/1:11,1:12:26.64:199,27,0	1/1:18,0:18:35.49:282,35,0	1/1:12,0:12:17.22:102,17,0	1/1:7,0:7:18:160,18,0
chr10	59785494	.	GGC	G	521.47	PASS	AB=0.984;AC=22;AF=0.407;AN=54;BaseQRankSum=6.921;DP=387;FS=10.156;HRun=0;HaplotypeScore=99.2914;InbreedingCoeff=0.0514;MQ=63.67;MQ0=4;MQRankSum=0.156;QD=2.32;ReadPosRankSum=5.874;VQSLOD=0.1099;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:25,1:26:52.64:69,0,53	1/1:6,0:6:8.53:27,9,0	0/0:28,0:6:9.03:0,9,127	0/0:32,0:13:14.47:0,14,130	1/1:8,1:9:13.69:75,14,0	0/0:22,0:22:37.94:0,38,302	0/0:17,0:17:31.76:0,32,251	0/1:10,0:10:8.67:54,0,9	1/1:9,0:9:11.07:37,11,0	0/1:16,0:16:4.07:81,0,4	0/1:10,1:11:17.76:18,0,33	0/0:9,0:9:17.68:0,18,127	0/0:11,0:11:20.86:0,21,170	1/1:11,0:10:20.26:72,20,0	0/1:17,0:17:0.21:43,0,0	0/1:5,0:5:6.08:6,0,11	0/1:24,1:25:54.09:66,0,54	0/1:15,0:15:13.36:13,0,33	0/1:7,0:7:8.54:9,0,30	0/1:9,0:9:10:10,0,13	0/1:15,0:15:8.83:17,0,9	./.	0/0:16,0:15:11.79:0,12,178	0/0:12,0:11:19.15:0,19,190	0/1:12,1:13:19.27:41,0,19	0/1:14,0:14:4.52:41,0,5	0/0:13,0:13:11.32:0,11,80	0/1:7,0:7:8.46:11,0,8
chr10	59785829	.	T	TTTC	2939.80	PASS	AB=0.975;AC=37;AF=0.661;AN=56;BaseQRankSum=-7.628;DP=422;FS=53.885;HRun=0;HaplotypeScore=80.7424;InbreedingCoeff=-0.1489;MQ=56.58;MQ0=6;MQRankSum=4.350;QD=7.60;ReadPosRankSum=4.892;VQSLOD=0.5347;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:30:46.85:196,0,47	1/1:5,0:4:11.92:90,12,0	0/1:25,0:11:1.44:1,0,165	0/0:12,0:8:5.34:0,5,91	0/1:19,0:18:21.64:81,0,22	1/1:14,0:13:1.26:68,1,0	1/1:10,0:10:8.25:101,8,0	0/1:17,13:31:58.99:261,0,59	1/1:14,0:14:21.04:209,21,0	1/1:21,0:21:19.09:325,19,0	0/1:10,0:9:5.07:44,0,5	0/1:11,0:11:21.97:95,0,22	1/1:12,0:12:13.37:155,13,0	0/0:7,0:7:1.25:0,1,3	0/1:18,0:17:53.24:92,0,53	0/1:17,0:17:26:69,0,26	0/0:16,0:16:4.39:0,4,25	0/1:15,0:15:19.54:98,0,20	0/1:19,0:19:12.45:146,0,12	1/1:11,0:11:5.51:154,6,0	1/1:6,0:5:5.99:49,6,0	1/1:4,0:4:4.84:30,5,0	1/1:13,0:11:9.85:104,10,0	1/1:17,0:17:10.44:140,10,0	0/1:10,0:10:7.66:98,0,8	1/1:24,0:24:13.21:272,13,0	0/1:19,0:19:30.97:186,0,31	0/1:11,0:11:27.38:33,0,27
chr10	59785831	.	T	TC	3008.38	PASS	AB=0.869;AC=37;AF=0.661;AN=56;BaseQRankSum=0.174;DP=429;FS=121.347;HRun=0;HaplotypeScore=64.4203;InbreedingCoeff=0.0441;MQ=56.45;MQ0=6;MQRankSum=2.413;QD=8.04;ReadPosRankSum=8.377;VQSLOD=0.3964;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:31,0:31:32.28:362,32,0	1/1:6,0:5:11.85:90,12,0	0/1:27,0:11:1.18:1,0,159	0/0:15,0:9:8.31:0,8,111	1/1:19,0:18:22.95:139,23,0	1/1:14,0:13:33.71:185,34,0	1/1:11,0:11:21.85:138,22,0	0/1:29,0:28:99:195,0,261	1/1:14,0:14:32.67:232,33,0	0/1:20,0:20:41.94:278,0,42	0/1:10,0:9:38.79:39,0,55	1/1:11,0:11:16.98:141,17,0	1/1:14,0:14:34.26:212,34,0	0/0:1,6:7:2.50:0,2,9	0/1:17,0:16:48.39:48,0,118	0/0:9,7:17:6.32:0,6,135	0/0:9,7:16:11.13:0,11,63	1/1:14,0:14:18.56:166,19,0	0/1:17,0:17:79.62:80,0,98	0/1:5,6:11:65.31:83,0,65	1/1:6,0:5:5.99:49,6,0	1/1:5,0:5:7.45:60,7,0	1/1:13,0:11:0.85:117,1,0	1/1:17,0:17:37.29:230,37,0	0/1:3,5:8:22.68:23,0,54	0/1:12,13:26:99:215,0,112	0/1:23,0:23:83.87:84,0,154	0/1:5,6:11:13.59:14,0,58
chr10	59786167	.	TTTCTTTCTTTC	T	1904.98	PASS	AB=1.000;AC=27;AF=0.482;AN=56;BaseQRankSum=-2.545;DP=390;FS=2.534;HRun=0;HaplotypeScore=157.9063;InbreedingCoeff=-0.5095;MQ=47.42;MQ0=14;MQRankSum=-0.922;QD=5.20;ReadPosRankSum=-4.337;VQSLOD=1.5430;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:21,0:20:15.30:367,0,15	0/1:6,0:6:8.55:49,0,9	0/0:5,0:2:2.90:0,3,16	0/0:6,0:6:4.52:0,5,30	1/1:7,20:24:20.32:259,20,0	0/1:8,0:8:44.80:45,0,53	0/1:8,0:7:12.34:12,0,44	1/1:20,0:19:21.12:163,21,0	1/1:19,0:19:10.57:112,11,0	0/1:24,0:21:31.57:108,0,32	0/1:20,0:18:59.14:129,0,59	0/1:14,0:14:65.59:87,0,66	0/1:10,0:9:5.65:6,0,49	0/1:11,0:10:15.17:15,0,81	0/1:11,0:10:15.65:16,0,97	0/1:18,0:17:63.07:63,0,129	0/1:19,0:18:25.40:143,0,25	0/1:12,0:12:31.12:176,0,31	0/0:8,0:4:3.46:0,3,30	0/1:15,0:14:61.83:97,0,62	0/1:10,0:10:28.53:29,0,30	0/1:14,0:14:28.19:28,0,111	0/1:13,0:13:0.82:1,0,20	0/1:12,0:11:39.21:39,0,58	0/1:18,0:17:25.05:25,0,176	0/1:18,0:16:33.05:47,0,33	0/1:18,0:16:47.71:48,0,63	0/0:5,0:5:11.93:0,12,120
chr10	59786176	.	TTC	T	3905.03	PASS	AB=0.976;AC=46;AF=0.821;AN=56;BaseQRankSum=-0.853;DP=403;FS=47.702;HRun=0;HaplotypeScore=88.7686;InbreedingCoeff=0.1667;MQ=45.84;MQ0=18;MQRankSum=0.293;QD=9.99;ReadPosRankSum=-2.634;VQSLOD=1.0143;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:15,0:15:52.69:65,0,53	0/1:5,1:6:6.64:49,0,7	0/0:5,0:1:2.94:0,3,18	0/0:7,0:6:5.77:0,6,43	1/1:28,0:25:12.63:70,13,0	1/1:13,1:13:23.72:159,24,0	0/1:10,0:8:22.84:23,0,29	1/1:15,0:12:11.89:76,12,0	1/1:8,15:23:11.48:92,11,0	1/1:23,0:20:26.79:339,27,0	1/1:19,1:18:33.83:275,34,0	0/1:14,0:14:3.95:257,0,4	1/1:11,0:10:23.85:199,24,0	1/1:11,1:11:29.60:223,30,0	1/1:12,0:11:23.15:159,23,0	1/1:17,2:18:36.29:315,36,0	0/1:20,0:19:5.77:65,0,6	1/1:13,1:14:1.24:108,1,0	0/1:8,0:4:10.22:48,0,10	1/1:14,1:13:32.80:254,33,0	1/1:9,1:10:18.53:122,19,0	1/1:7,6:13:11.79:88,12,0	1/1:13,0:13:1.19:4,1,0	1/1:12,0:10:15.38:123,15,0	1/1:18,0:17:7.32:168,7,0	1/1:19,0:17:36.24:250,36,0	1/1:19,0:16:29.19:193,29,0	1/1:8,0:8:20.21:179,20,0
chr10	59786177	.	TC	T	4494.84	PASS	AB=1.000;AC=49;AF=0.875;AN=56;BaseQRankSum=-1.883;DP=401;FS=30.156;HRun=1;HaplotypeScore=78.9724;InbreedingCoeff=0.2952;MQ=46.00;MQ0=19;MQRankSum=-0.779;QD=11.55;ReadPosRankSum=-3.351;VQSLOD=0.9888;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:14,0:14:36.11:69,0,36	1/1:7,0:7:13.13:81,13,0	0/0:5,0:1:2.60:0,3,10	0/0:7,0:6:4.14:0,4,38	1/1:28,0:25:11.50:66,11,0	1/1:14,0:13:24.75:148,25,0	0/1:10,0:8:15.49:29,0,15	1/1:15,0:12:16.90:118,17,0	1/1:21,2:23:17.15:81,17,0	1/1:22,1:20:31.72:365,32,0	1/1:17,2:17:39.48:278,39,0	1/1:14,0:14:3.63:226,4,0	1/1:10,1:10:26.90:188,27,0	1/1:12,0:11:30.42:226,30,0	1/1:10,2:11:25.14:183,25,0	1/1:18,1:18:50.33:430,50,0	1/1:19,1:18:35.83:206,36,0	1/1:12,0:12:12.59:104,13,0	0/1:9,0:5:11.98:56,0,12	1/1:13,2:13:34.39:277,34,0	1/1:9,1:10:18.74:130,19,0	1/1:13,0:13:18.07:96,18,0	1/1:3,9:12:4.36:11,4,0	1/1:12,0:10:16.94:123,17,0	1/1:15,3:17:11.73:199,12,0	1/1:14,6:18:45.02:325,45,0	1/1:16,3:16:40.78:307,41,0	1/1:8,0:8:20.96:173,21,0
chr10	59786227	.	A	AT	6765.86	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-9.731;DP=432;FS=4.185;HRun=1;HaplotypeScore=47.6541;InbreedingCoeff=0.9429;MQ=54.46;MQ0=16;MQRankSum=1.910;QD=38.88;ReadPosRankSum=0.286;VQSLOD=5.0624;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:39.13:0,39,506	0/0:10,0:10:27.09:0,27,351	0/0:10,0:5:0.33:0,0,89	0/0:18,0:12:30.08:0,30,365	0/0:11,0:10:27.09:0,27,349	0/0:16,0:15:45.15:0,45,584	0/0:14,0:13:36.12:0,36,467	0/0:29,0:25:69.22:0,69,896	0/0:21,0:20:39.13:0,39,506	1/1:2,11:11:33.11:494,33,0	1/1:0,12:12:33.11:495,33,0	0/0:16,0:16:42.14:0,42,545	0/0:23,0:23:69.22:0,69,890	1/1:0,18:18:54.18:809,54,0	1/1:2,13:14:4.18:504,4,0	1/1:1,22:23:63.21:944,63,0	0/0:20,0:20:51.16:0,51,657	0/0:11,0:11:27.09:0,27,350	1/1:5,14:13:33.11:489,33,0	1/1:2,11:12:30.10:450,30,0	1/1:2,10:12:30.06:425,30,0	0/0:10,0:10:24.08:0,24,307	0/0:17,0:17:51.17:0,51,662	0/0:16,0:15:33.11:0,33,428	1/1:0,8:8:24.08:360,24,0	1/1:0,15:15:45.15:672,45,0	1/1:0,19:19:54.18:809,54,0	1/1:0,7:7:21.07:315,21,0
chr10	59787592	.	AG	A	4708.07	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-3.515;DP=428;FS=2.072;HRun=1;HaplotypeScore=63.5021;InbreedingCoeff=0.7654;MQ=59.49;MQ0=12;MQRankSum=0.565;QD=12.62;ReadPosRankSum=1.001;VQSLOD=3.6165;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:18,1:17:33.45:240,33,0	1/1:1,0:1:3:26,3,0	0/0:25,0:12:10.28:0,10,145	0/0:30,0:15:17.83:0,18,248	1/1:19,3:22:27.33:225,27,0	1/1:17,3:20:40.44:306,40,0	1/1:13,0:11:19.75:147,20,0	1/1:13,0:13:35.95:291,36,0	1/1:11,2:13:18.94:129,19,0	1/1:13,1:14:30.64:198,31,0	1/1:25,0:25:47.26:263,47,0	1/1:14,2:16:34.13:248,34,0	1/1:12,1:12:26.67:167,27,0	1/1:10,0:9:21.96:140,22,0	1/1:10,0:10:10.66:73,11,0	1/1:12,0:11:9.76:70,10,0	1/1:23,0:23:31.61:197,32,0	1/1:1,0:1:3:26,3,0	1/1:18,0:17:41.76:291,42,0	1/1:20,1:21:44.83:303,45,0	1/1:10,0:10:26.64:197,27,0	1/1:10,0:11:18.38:123,18,0	1/1:16,2:18:21.75:258,22,0	1/1:12,1:13:26.45:207,26,0	1/1:12,0:12:17.92:123,18,0	1/1:19,0:19:37.85:220,38,0	1/1:14,1:15:22.36:123,22,0	1/1:11,0:11:19.59:118,20,0
chr10	59790711	.	C	CT	859.12	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=-4.111;DP=551;FS=5.670;HRun=12;HaplotypeScore=69.1219;InbreedingCoeff=0.7120;MQ=69.99;MQ0=1;MQRankSum=-0.106;QD=9.44;ReadPosRankSum=-2.941;VQSLOD=2.1780;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:50.36:0,50,357	1/1:1,3:4:11.86:102,12,0	0/0:14,0:12:5.92:0,6,43	0/0:4,0:3:2.47:0,2,9	0/0:41,0:41:87.91:0,88,606	0/0:19,0:19:32.74:0,33,240	0/0:15,0:15:35.78:0,36,262	1/1:10,20:31:41.01:478,41,0	0/0:19,0:19:15.50:0,15,237	0/0:32,0:31:65.20:0,65,463	0/1:30,0:30:1.37:1,0,228	0/0:21,0:21:38.68:0,39,284	0/0:18,0:18:38.67:0,39,284	0/0:14,0:14:29.76:0,30,218	0/0:18,0:19:31.80:0,32,225	0/0:16,3:19:6.56:0,7,208	1/1:5,21:26:26.01:416,26,0	0/0:6,0:6:11.89:0,12,85	0/0:16,0:16:26.80:0,27,197	0/0:30,1:31:21.07:0,21,306	0/0:13,2:14:0.58:0,1,162	0/0:17,0:18:37.65:0,38,259	0/0:19,0:19:20.37:0,20,174	0/0:12,0:12:23.79:0,24,175	0/0:22,0:22:47.59:0,48,343	0/0:29,0:28:59.42:0,59,427	0/0:23,0:23:47.60:0,48,347	0/0:11,0:11:14.79:0,15,109
chr10	59791195	.	AT	A	5381.85	PASS	AB=0.704;AC=46;AF=0.821;AN=56;BaseQRankSum=1.821;DP=502;FS=8.766;HRun=14;HaplotypeScore=57.2806;InbreedingCoeff=0.0291;MQ=70.55;MQ0=9;MQRankSum=-0.149;QD=11.03;ReadPosRankSum=1.313;VQSLOD=4.1906;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,31:41:50.74:454,51,0	0/1:2,6:9:3.26:89,0,3	0/0:14,0:10:14.51:0,15,94	0/1:8,1:8:7.09:12,0,7	1/1:4,19:26:32.71:351,33,0	1/1:5,13:20:17.41:219,17,0	1/1:2,13:15:22.71:213,23,0	1/1:7,17:24:49.43:329,49,0	0/1:9,1:10:23.09:23,0,93	1/1:11,16:24:17.15:260,17,0	1/1:4,12:17:30.77:197,31,0	1/1:3,16:20:16.75:247,17,0	1/1:3,10:15:2.66:145,3,0	1/1:4,2:8:15.02:80,15,0	1/1:1,12:14:25.83:170,26,0	1/1:0,7:7:17.86:123,18,0	1/1:6,18:27:64.66:414,65,0	0/1:19,3:22:19.77:20,0,249	0/1:3,9:11:26.90:118,0,27	0/1:6,8:15:46.69:139,0,47	1/1:4,14:19:10.50:218,10,0	1/1:1,12:14:34.72:232,35,0	1/1:6,14:20:38.63:267,39,0	1/1:5,15:20:16.40:260,16,0	1/1:3,15:19:34.56:224,35,0	1/1:9,19:27:55.46:374,55,0	0/1:4,9:14:26.86:121,0,27	0/1:3,5:8:22.91:84,0,23
chr10	59794276	.	GCACACACACACACACACACA	G	7595.83	PASS	AB=0.750;AC=21;AF=0.404;AN=52;BaseQRankSum=9.142;DP=579;FS=12.702;HRun=0;HaplotypeScore=281.8282;InbreedingCoeff=0.8082;MQ=66.53;MQ0=21;MQRankSum=-7.378;QD=39.77;ReadPosRankSum=-1.363;VQSLOD=2.2829;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:25:27.09:0,27,1372	0/0:4,0:6:9.03:0,9,709	./.	./.	0/0:13,0:18:33.11:0,33,1926	0/0:16,0:16:18.06:0,18,1109	0/0:13,0:20:18.06:0,18,1049	0/0:17,0:17:19.62:0,20,752	0/0:11,0:15:18.06:0,18,944	1/1:13,9:21:21.07:803,21,0	1/1:4,5:9:6.02:319,6,0	0/0:18,0:26:39.61:0,40,2026	0/0:15,0:21:36.12:0,36,2245	1/1:14,6:20:14.84:651,15,0	1/1:10,5:19:24.08:1156,24,0	1/1:9,9:19:27.09:1415,27,0	0/0:12,0:21:36.12:0,36,2405	0/0:22,0:24:34.93:0,35,2059	1/1:18,1:20:6.02:299,6,0	1/1:11,7:18:12.04:638,12,0	0/0:34,0:32:3.01:0,3,51	0/0:20,0:25:45.15:0,45,2309	0/0:10,0:13:21.07:0,21,951	0/0:22,0:33:51.05:0,51,2726	1/1:18,5:22:15.05:797,15,0	1/1:17,7:25:20.20:578,20,0	0/1:10,5:15:24.80:779,0,25	1/1:0,1:1:3.01:160,3,0
chr10	59795414	.	GC	G	7289.43	PASS	AB=0.624;AC=29;AF=0.518;AN=56;BaseQRankSum=8.755;DP=597;FS=19.297;HRun=3;HaplotypeScore=124.2200;InbreedingCoeff=-0.0732;MQ=86.90;MQ0=3;MQRankSum=-9.868;QD=18.13;ReadPosRankSum=0.692;VQSLOD=3.5247;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,132,1859	0/1:4,6:10:92.44:218,0,92	0/0:40,1:40:83.24:0,83,1396	0/0:29,0:29:84.27:0,84,1163	0/0:32,0:32:75.21:0,75,1055	0/1:3,9:11:53:301,0,53	0/1:11,10:19:99:317,0,234	0/1:12,0:30:99:519,0,361	0/0:25,0:25:75.24:0,75,1061	0/1:5,0:23:99:425,0,130	1/1:5,0:17:7.72:111,8,0	0/1:6,11:16:3.97:394,0,4	0/1:6,11:16:95.95:264,0,96	0/1:11,8:17:56.88:200,0,57	1/1:5,17:19:49.40:597,49,0	1/1:4,12:15:36.11:438,36,0	1/1:4,9:13:24.07:297,24,0	0/0:20,0:20:60.20:0,60,863	0/1:13,11:23:99:447,0,201	0/1:5,8:13:50.56:287,0,51	0/1:11,7:17:78.71:162,0,79	1/1:0,2:18:6.02:74,6,0	0/1:4,2:16:12.91:65,0,13	1/1:4,3:7:6.49:75,6,0	0/1:9,14:23:99:477,0,150	0/1:8,6:25:99:634,0,140	0/1:5,14:18:1.48:473,0,1	1/1:3,16:18:5.39:515,5,0
chr10	59795432	.	GA	G	3784.75	PASS	AB=0.757;AC=25;AF=0.446;AN=56;BaseQRankSum=8.984;DP=560;FS=182.089;HRun=2;HaplotypeScore=128.9537;InbreedingCoeff=-0.3858;MQ=72.32;MQ0=10;MQRankSum=-10.341;QD=9.73;ReadPosRankSum=2.435;VQSLOD=-0.3872;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,126,1843	0/1:3,6:9:95.64:206,0,96	0/0:30,1:29:37.53:0,38,993	0/0:25,1:24:39.41:0,39,671	0/0:23,0:23:63.16:0,63,899	0/1:3,9:11:59.65:281,0,60	0/1:13,8:19:99:217,0,373	0/1:40,3:40:99:162,0,695	0/0:22,0:22:66.21:0,66,967	0/1:26,1:25:35.74:36,0,287	0/1:17,1:18:23.81:24,0,164	0/1:4,11:14:62.55:245,0,63	0/1:4,16:17:47.64:424,0,48	0/1:8,5:11:56.65:57,0,203	1/1:1,16:14:36.12:466,36,0	1/1:1,10:10:24.08:311,24,0	0/1:8,2:10:65.71:66,0,75	0/0:20,0:20:60.20:0,60,899	0/1:25,4:27:99:104,0,817	0/1:7,6:13:99:163,0,153	0/1:13,2:12:11.73:12,0,326	1/1:16,3:19:6.02:78,6,0	0/1:16,2:16:62.65:63,0,119	0/1:4,2:6:33.06:33,0,38	0/1:13,9:19:99:152,0,357	0/1:22,6:26:99:284,0,266	0/1:6,10:15:98.48:300,0,98	0/1:4,3:6:74.66:102,0,75
chr10	59795523	.	G	GC	3562.55	PASS	AB=0.765;AC=25;AF=0.446;AN=56;BaseQRankSum=4.483;DP=502;FS=103.466;HRun=2;HaplotypeScore=80.3775;InbreedingCoeff=-0.3576;MQ=44.89;MQ0=41;MQRankSum=-9.494;QD=9.90;ReadPosRankSum=1.597;VQSLOD=-0.0588;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,108,1337	1/1:3,4:5:12.04:173,12,0	0/1:45,0:9:33.04:63,0,33	0/1:44,0:6:6.90:7,0,96	0/0:15,0:14:24.08:0,24,297	0/1:1,9:10:7.02:357,0,7	0/1:8,2:8:68.20:68,0,130	0/1:27,1:18:35.97:36,0,472	0/0:37,0:37:90.24:0,90,1098	0/1:10,2:10:65.26:65,0,165	0/1:6,2:8:59.35:105,0,59	0/1:6,3:7:88.09:88,0,93	0/1:10,6:12:87.23:191,0,87	0/1:12,12:20:94.33:506,0,94	1/1:5,8:10:21.07:293,21,0	1/1:7,5:9:18.06:251,18,0	0/1:15,6:20:99:135,0,211	0/0:27,0:26:75.24:0,75,928	0/1:5,7:9:13.08:276,0,13	0/1:6,5:9:90.44:151,0,90	0/1:13,9:18:99:123,0,193	0/0:8,0:8:18.06:0,18,223	0/1:7,2:9:68.17:68,0,119	0/0:9,0:8:10.27:0,10,114	0/1:9,3:8:68.20:68,0,131	0/1:11,3:7:39.30:146,0,39	0/1:3,7:9:51.15:234,0,51	0/1:3,6:8:22.15:157,0,22
chr10	59795587	.	G	GC	82.08	PASS	AC=4;AF=0.133;AN=30;BaseQRankSum=3.288;DP=297;FS=2.410;HRun=2;HaplotypeScore=35.6875;InbreedingCoeff=0.4963;MQ=34.66;MQ0=95;MQRankSum=-3.119;QD=7.46;ReadPosRankSum=-0.228;VQSLOD=0.7916;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:36:75.24:0,75,929	./.	./.	./.	0/0:22,0:21:33.10:0,33,409	0/0:2,0:1:0:0,0,0	./.	0/0:11,0:5:15.05:0,15,186	0/0:33,0:30:75.22:0,75,916	0/0:3,0:2:3.01:0,3,37	./.	./.	./.	1/1:3,1:3:2.90:43,3,0	1/1:1,6:3:9.03:129,9,0	./.	0/0:4,1:3:6.02:0,6,74	0/0:29,0:28:75.18:0,75,899	0/0:6,0:3:6.02:0,6,74	./.	0/0:13,3:3:3.01:0,3,37	./.	./.	./.	0/0:2,0:1:0:0,0,0	0/0:4,0:2:6.02:0,6,74	./.	0/0:8,3:10:3.01:0,3,37
chr10	59795651	.	G	GC	521.04	PASS	AB=0.831;AC=17;AF=0.425;AN=40;BaseQRankSum=6.442;DP=265;FS=25.916;HRun=1;HaplotypeScore=40.9302;InbreedingCoeff=0.3622;MQ=32.79;MQ0=72;MQRankSum=-5.760;QD=9.47;ReadPosRankSum=1.908;VQSLOD=-0.4753;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:30:63.18:0,63,801	0/0:1,0:1:3.01:0,3,39	./.	./.	0/0:23,0:19:33.10:0,33,428	./.	./.	./.	0/0:38,0:37:90.24:0,90,1146	0/1:15,0:6:15.91:16,0,113	0/0:5,0:4:0:0,0,0	1/1:1,3:2:6.01:74,6,0	0/1:3,2:3:30.07:49,0,30	1/1:3,3:4:6.02:77,6,0	1/1:1,1:1:3.01:45,3,0	0/1:5,2:4:29.86:46,0,30	1/1:0,2:1:3.01:44,3,0	0/0:24,0:23:66.21:0,66,854	./.	1/1:3,4:6:12.04:166,12,0	./.	1/1:2,1:1:3.01:45,3,0	0/0:3,0:3:0.98:0,1,17	./.	0/0:5,0:2:5.94:0,6,41	0/0:6,0:3:9.03:0,9,117	1/1:3,1:3:8.99:99,9,0	0/0:6,1:7:3.01:0,3,39
chr10	59795712	.	G	GA	210.96	PASS	AB=0.809;AC=9;AF=0.281;AN=32;BaseQRankSum=4.289;DP=286;FS=7.216;HRun=1;HaplotypeScore=30.3432;InbreedingCoeff=0.1390;MQ=22.09;MQ0=140;MQRankSum=-2.914;QD=5.86;ReadPosRankSum=-0.290;VQSLOD=0.1089;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:12:18.06:0,18,233	1/1:1,1:2:3.01:45,3,0	./.	./.	0/0:19,0:16:15.05:0,15,194	0/0:2,0:1:3.01:0,3,39	./.	./.	0/0:39,0:33:56.87:0,57,719	0/1:8,1:8:20.80:21,0,244	0/1:5,2:4:65.30:78,0,65	0/0:4,0:2:6.02:0,6,77	1/1:3,1:2:3.01:45,3,0	./.	0/0:7,0:1:3.01:0,3,38	./.	./.	0/0:25,0:19:33.11:0,33,428	./.	0/0:4,0:3:3.01:0,3,39	./.	./.	1/1:5,0:2:2.22:7,2,0	./.	0/0:7,0:4:3.01:0,3,39	0/1:6,3:4:26.30:122,0,26	0/0:4,0:2:6.02:0,6,77	./.
chr10	59795970	.	G	GA	131.32	PASS	AB=0.778;AC=7;AF=0.389;AN=18;BaseQRankSum=0.103;DP=373;FS=0.000;HRun=1;HaplotypeScore=13.0884;MQ=10.79;MQ0=275;MQRankSum=0.851;QD=3.86;ReadPosRankSum=0.851;VQSLOD=-0.0605;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	./.	./.	./.	./.	./.	1/1:11,3:1:3.01:45,3,0	./.	0/0:19,3:6:3.01:0,3,39	0/0:15,6:5:0:0,0,0	./.	./.	./.	./.	./.	0/0:10,0:2:3.01:0,3,39	./.	0/0:28,11:7:3:0,3,29	1/1:1,3:2:6.02:88,6,0	./.	./.	1/1:1,1:1:3.01:45,3,0	0/1:10,4:2:32.92:39,0,33	0/0:9,2:3:3.01:0,3,39	./.
chr10	59796084	.	C	CT	237.45	PASS	AB=0.909;AC=9;AF=0.300;AN=30;BaseQRankSum=-2.526;DP=273;FS=0.000;HRun=1;HaplotypeScore=28.0962;InbreedingCoeff=0.3125;MQ=18.81;MQ0=147;MQRankSum=1.516;QD=5.05;ReadPosRankSum=-1.233;VQSLOD=-0.2040;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:33,0:1:2.98:0,3,21	0/0:40,0:6:0.62:0,1,92	./.	./.	1/1:13,3:3:9.03:134,9,0	1/1:8,1:1:3.01:45,3,0	./.	0/1:9,1:6:36.12:36,0,69	./.	./.	0/0:9,0:4:6.02:0,6,75	0/0:20,0:5:3.01:0,3,39	0/0:12,0:8:9.03:0,9,117	./.	./.	./.	0/0:7,0:1:3.01:0,3,39	./.	0/0:36,0:20:24.08:0,24,309	./.	1/1:2,1:1:3.01:40,3,0	0/0:7,0:3:3.01:0,3,39	0/0:2,0:1:3.01:0,3,39	1/1:7,2:3:6.02:90,6,0	./.	0/0:6,0:3:2.97:0,3,20
chr10	59796386	.	G	GC	243.65	PASS	AB=0.881;AC=9;AF=0.250;AN=36;BaseQRankSum=-1.044;DP=375;FS=1.911;HRun=1;HaplotypeScore=25.1402;InbreedingCoeff=0.2073;MQ=14.33;MQ0=238;MQRankSum=-0.613;QD=2.90;ReadPosRankSum=0.812;VQSLOD=-0.5151;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	0/0:10,0:7:3.01:0,3,39	./.	1/1:14,6:8:9.50:130,10,0	./.	0/0:15,0:4:9.03:0,9,117	0/1:9,1:6:33.75:55,0,34	0/0:4,0:2:3.01:0,3,39	./.	0/0:15,0:7:9.02:0,9,117	0/0:12,2:7:9.03:0,9,116	0/1:11,3:4:32.84:37,0,33	1/1:4,2:2:3.01:45,3,0	0/0:12,1:4:5.93:0,6,40	./.	./.	0/0:8,0:3:6.02:0,6,78	0/1:27,3:3:5.30:5,0,27	0/0:8,1:5:5.99:0,6,60	0/0:7,0:3:6:0,6,62	./.	0/0:11,2:7:3.01:0,3,39	0/0:12,0:4:5.91:0,6,78	0/0:13,2:4:5.65:0,6,31	1/1:2,2:2:6.02:88,6,0
chr10	59796623	.	G	GC	1999.36	PASS	AB=0.719;AC=23;AF=0.411;AN=56;BaseQRankSum=9.151;DP=373;FS=48.513;HRun=1;HaplotypeScore=72.0405;InbreedingCoeff=-0.2247;MQ=35.78;MQ0=40;MQRankSum=-9.125;QD=12.50;ReadPosRankSum=-1.740;VQSLOD=-0.4200;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:34:93.19:0,93,1156	1/1:2,3:4:3.01:43,3,0	0/0:30,0:2:3.01:0,3,39	0/0:36,0:7:21.07:0,21,270	0/0:15,0:15:42.10:0,42,523	0/1:3,3:6:47.70:74,0,48	0/1:4,2:5:51.33:51,0,66	0/0:20,0:14:42:0,42,503	0/0:20,0:20:60.15:0,60,746	0/1:2,2:4:65.82:74,0,66	0/1:5,4:9:21.52:114,0,22	0/1:2,4:6:23.85:134,0,24	0/1:6,3:8:26.83:117,0,27	0/1:6,9:14:26.74:271,0,27	0/1:7,3:9:40.78:131,0,41	1/1:2,4:6:0.07:197,0,0	1/1:4,4:7:5.98:65,6,0	0/0:46,0:45:99:0,135,1738	0/1:12,1:5:28.21:28,0,100	0/1:8,2:9:29.96:55,0,30	0/0:9,1:5:3.01:0,3,31	0/1:5,2:6:8.06:8,0,69	0/1:4,4:7:62.61:107,0,63	1/1:2,4:5:6.02:83,6,0	0/1:6,4:6:3.91:157,0,4	0/1:3,4:6:6.93:118,0,7	0/1:9,6:13:24.74:330,0,25	0/0:1,0:1:3.01:0,3,39
chr10	59796644	.	GC	G	6918.08	PASS	AB=0.615;AC=34;AF=0.607;AN=56;BaseQRankSum=12.055;DP=498;FS=28.309;HRun=3;HaplotypeScore=83.8863;InbreedingCoeff=0.2694;MQ=48.95;MQ0=36;MQRankSum=-6.115;QD=22.68;ReadPosRankSum=-2.721;VQSLOD=2.6582;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,102,1445	1/1:0,7:7:21.07:260,21,0	0/0:34,0:10:30.10:0,30,432	0/0:41,0:18:51.15:0,51,698	0/0:15,0:15:36.03:0,36,471	0/1:2,13:15:50.10:335,0,50	0/1:1,17:17:3.96:407,0,4	0/1:12,9:17:99:270,0,230	0/0:26,0:26:66.22:0,66,949	0/1:2,10:12:50.18:336,0,50	1/1:0,9:9:24.07:297,24,0	1/1:1,8:9:21.07:260,21,0	1/1:5,10:14:27.08:334,27,0	1/1:4,15:18:25.16:500,25,0	1/1:1,13:13:10.11:314,10,0	1/1:0,8:7:21.07:260,21,0	0/1:2,16:18:12.90:305,0,13	0/0:41,0:41:99:0,120,1662	0/1:6,7:7:25.15:168,0,25	1/1:1,13:13:27.08:334,27,0	0/1:3,18:17:19.03:236,0,19	0/1:3,8:11:61.61:200,0,62	0/1:3,12:14:50.02:324,0,50	1/1:0,15:13:30.09:369,30,0	1/1:1,11:11:30.09:369,30,0	1/1:1,18:17:45.13:545,45,0	1/1:1,17:18:39.12:481,39,0	0/1:2,0:2:14.98:16,0,15
chr10	59797712	.	TGC	T	185.45	PASS	AB=0.974;AC=17;AF=0.327;AN=52;BaseQRankSum=1.723;DP=395;FS=12.826;HRun=0;HaplotypeScore=102.6972;InbreedingCoeff=0.1627;MQ=40.40;MQ0=22;MQRankSum=-1.280;QD=0.97;ReadPosRankSum=-0.617;VQSLOD=1.2408;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:20:45.64:0,46,529	0/0:14,0:10:3.48:0,3,42	0/0:6,0:1:3.01:0,3,40	./.	0/0:9,0:8:5.87:0,6,63	1/1:9,1:9:14.92:113,15,0	0/1:22,0:19:9.78:34,0,10	0/0:22,0:19:20.80:0,21,307	0/0:14,0:14:32.61:0,33,334	0/1:23,0:21:40.20:40,0,88	0/0:10,0:10:10.45:0,10,82	0/1:6,1:7:0.01:0,0,0	0/1:7,1:8:31.01:31,0,36	0/0:10,0:10:5.82:0,6,59	1/1:8,0:8:0.45:1,0,0	0/0:6,0:6:0:0,0,0	0/0:15,0:15:14.26:0,14,112	0/0:34,0:30:71.44:0,71,870	0/0:14,0:13:16.49:0,16,179	0/0:10,0:10:9.33:0,9,78	0/1:23,0:19:9.62:10,0,34	0/1:7,0:6:0:0,0,0	./.	1/1:12,1:14:4.55:28,5,0	1/1:26,0:26:4.61:16,5,0	0/1:21,0:18:33.51:34,0,124	0/1:12,0:11:6.10:6,0,114	0/1:10,0:10:13.71:14,0,14
chr10	59797716	.	TGCGTGC	T	2669.90	PASS	AB=0.930;AC=26;AF=0.542;AN=48;BaseQRankSum=-5.694;DP=400;FS=0.000;HRun=0;HaplotypeScore=113.3752;InbreedingCoeff=0.1345;MQ=39.46;MQ0=23;MQRankSum=1.976;QD=8.87;ReadPosRankSum=-1.932;VQSLOD=1.8994;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:23:17.56:640,18,0	1/1:14,0:10:0.81:20,1,0	./.	./.	0/1:1,6:6:0:0,0,0	1/1:9,1:9:15:183,15,0	1/1:25,0:22:8.03:80,8,0	1/1:22,0:18:20.93:172,21,0	1/1:16,0:15:31.67:340,32,0	0/1:24,0:22:30.70:31,0,152	0/0:9,0:9:4.91:0,5,71	0/1:6,1:7:0.04:0,0,0	0/1:7,1:8:11.60:91,0,12	0/0:10,0:10:5.80:0,6,76	0/0:8,0:8:1.67:0,2,5	0/0:6,0:6:0:0,0,0	0/1:16,0:16:75.74:125,0,76	1/1:35,0:31:5.09:992,5,0	0/1:14,0:13:9.90:57,0,10	0/0:8,0:8:6:0,6,76	0/0:27,0:23:7.68:0,8,42	0/1:8,0:7:0:0,0,0	./.	./.	1/1:27,0:27:1.99:6,2,0	0/1:20,0:17:51.84:52,0,132	0/1:12,0:11:4.52:5,0,142	0/1:11,0:10:13.56:14,0,54
chr10	59797718	.	C	CGTGTGT	1079.86	PASS	AB=0.985;AC=29;AF=0.604;AN=48;BaseQRankSum=1.705;DP=404;FS=38.187;HRun=0;HaplotypeScore=128.5968;InbreedingCoeff=0.1305;MQ=39.15;MQ0=23;MQRankSum=-4.451;QD=3.70;ReadPosRankSum=-0.772;VQSLOD=0.8822;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:25:39.36:0,39,400	1/1:14,0:10:0.89:2,1,0	./.	./.	./.	1/1:10,0:9:0.45:1,0,0	0/0:26,0:23:0.38:0,0,1	0/1:19,0:15:11.47:162,0,11	0/0:18,0:17:17.37:0,17,306	1/1:23,0:21:1.51:215,2,0	1/1:9,0:9:2.99:50,3,0	0/1:7,0:7:0:0,0,0	0/1:9,0:9:18.43:18,0,58	1/1:9,0:9:6.44:51,6,0	0/0:9,0:9:1.23:0,1,4	0/0:1,5:7:0:0,0,0	1/1:16,0:16:12.55:78,13,0	0/1:37,0:33:21.36:21,0,590	0/1:14,0:13:25.75:35,0,26	1/1:8,0:8:0.88:2,1,0	0/1:27,0:23:16.47:16,0,57	0/1:8,0:7:0:0,0,0	0/1:10,0:8:0:0,0,0	./.	1/1:28,0:27:0.45:1,0,0	1/1:20,0:17:30.67:358,31,0	0/1:11,2:12:7.32:32,0,7	1/1:11,0:10:9:156,9,0
chr10	59797720	.	TGC	T	2192.85	PASS	AB=0.930;AC=38;AF=0.792;AN=48;BaseQRankSum=-2.283;DP=396;FS=0.000;HRun=0;HaplotypeScore=102.4290;InbreedingCoeff=-0.0099;MQ=38.75;MQ0=24;MQRankSum=1.608;QD=5.91;ReadPosRankSum=0.624;VQSLOD=2.9070;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:15,13:26:3.17:542,0,3	1/1:15,0:11:2.01:20,2,0	./.	./.	0/1:6,1:6:0:0,0,0	1/1:8,0:7:8.95:68,9,0	1/1:25,0:22:2.08:17,2,0	1/1:19,0:15:15.41:75,15,0	1/1:17,0:16:30.47:184,30,0	1/1:22,0:20:5.06:140,5,0	1/1:8,0:8:2.99:24,3,0	0/1:7,0:7:0.01:0,0,0	0/1:9,0:9:14.40:34,0,14	1/1:9,0:9:0.94:2,1,0	1/1:9,0:9:2.95:20,3,0	0/1:7,0:7:0:0,0,0	0/1:16,0:16:6.58:58,0,7	0/1:24,13:33:49.06:688,0,49	1/1:15,0:13:2.21:65,2,0	1/1:8,0:8:2.83:25,3,0	0/1:27,0:23:4.84:78,0,5	0/1:8,0:7:0:0,0,0	./.	./.	1/1:28,0:27:5.88:51,6,0	1/1:18,0:15:7.21:127,7,0	1/1:13,0:12:9.69:65,10,0	0/1:11,0:10:2.69:14,0,3
chr10	59797722	.	CGT	C	449.77	PASS	AB=0.994;AC=10;AF=0.208;AN=48;BaseQRankSum=-3.316;DP=399;FS=32.263;HRun=0;HaplotypeScore=111.8383;InbreedingCoeff=0.4278;MQ=38.64;MQ0=23;MQRankSum=4.831;QD=3.41;ReadPosRankSum=0.121;VQSLOD=1.0533;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:26:12.77:184,13,0	0/0:15,0:11:1.35:0,1,3	./.	./.	./.	0/0:9,0:8:0:0,0,0	0/1:25,0:22:0.28:0,0,0	0/0:17,0:13:26.40:0,26,158	1/1:6,11:16:17.96:204,18,0	0/0:24,0:22:28.99:0,29,165	0/0:8,0:8:3:0,3,25	0/1:8,0:8:0.10:0,0,0	0/0:8,0:8:3.87:0,4,24	0/0:9,0:9:5.92:0,6,47	0/0:9,0:9:0:0,0,0	0/1:7,0:7:0:0,0,0	0/0:16,0:16:16.07:0,16,121	0/1:35,1:34:99:171,0,170	0/0:15,0:13:11.79:0,12,88	0/0:8,0:8:3:0,3,25	0/0:27,0:23:2.97:0,3,20	1/1:9,0:8:0.75:2,1,0	./.	0/0:14,0:14:2.04:0,2,6	0/0:27,0:26:0:0,0,0	0/0:18,0:15:19.75:0,20,143	0/0:13,0:12:12.34:0,12,82	0/0:12,0:11:6.43:0,6,49
chr10	59797752	.	T	TGCGCGCGC	2028.79	PASS	AB=1.000;AC=31;AF=0.596;AN=52;BaseQRankSum=-3.632;DP=444;FS=25.622;HRun=0;HaplotypeScore=145.6086;InbreedingCoeff=0.5874;MQ=49.26;MQ0=22;MQRankSum=-3.995;QD=7.77;ReadPosRankSum=-2.438;VQSLOD=0.5610;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:31:53.71:0,54,1000	0/1:17,0:13:6.12:6,0,45	0/0:3,0:2:6.02:0,6,109	0/0:6,0:5:6.06:0,6,58	0/0:11,0:10:15.04:0,15,273	./.	1/1:27,0:24:0.33:0,0,0	0/0:21,0:17:26.40:0,26,239	0/0:19,0:18:39.59:0,40,792	1/1:23,0:21:21.05:378,21,0	1/1:14,0:14:5.95:61,6,0	1/1:6,0:6:0.47:1,0,0	1/1:15,0:15:2.80:71,3,0	1/1:9,0:9:3.02:21,3,0	1/1:11,0:11:2.88:76,3,0	1/1:11,0:11:2.17:35,2,0	0/0:21,0:21:5.18:0,5,189	0/0:39,0:35:62.64:0,63,1192	1/1:11,4:15:15.05:300,15,0	0/0:9,0:9:0:0,0,0	1/1:23,1:20:2.97:64,3,0	0/1:7,0:7:0.16:0,0,0	./.	0/1:14,0:14:0.18:0,0,0	1/1:23,0:22:11.89:164,12,0	1/1:19,0:16:21.06:495,21,0	1/1:12,0:10:8.87:159,9,0	1/1:12,0:11:21.01:359,21,0
chr10	59797755	.	G	GCGCG	1402.14	PASS	AB=1.000;AC=40;AF=0.714;AN=56;BaseQRankSum=0.894;DP=423;FS=16.850;HRun=0;HaplotypeScore=123.0462;InbreedingCoeff=0.5497;MQ=53.52;MQ0=18;MQRankSum=-2.513;QD=4.61;ReadPosRankSum=-3.050;VQSLOD=0.6502;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:32:15.58:0,16,367	1/1:16,0:12:4.71:29,5,0	0/0:4,0:3:6.02:0,6,78	0/0:7,0:6:1.72:0,2,27	0/0:10,0:9:15.03:0,15,176	1/1:11,0:10:4.07:12,4,0	0/1:27,0:24:0.19:1,0,0	1/1:19,0:15:6.88:18,7,0	0/0:19,0:18:39.10:0,39,451	1/1:10,8:18:20.07:208,20,0	1/1:11,0:11:4.23:26,4,0	0/1:6,0:6:0.05:0,0,0	1/1:15,0:15:2.80:33,3,0	1/1:7,0:7:2.96:19,3,0	1/1:11,0:11:2.75:42,3,0	1/1:11,0:11:3.01:37,3,0	1/1:20,0:20:10.43:89,10,0	0/0:37,0:33:40.38:0,40,480	1/1:16,0:15:17.09:225,17,0	0/0:8,0:8:0:0,0,0	1/1:21,0:19:2.47:38,2,0	1/1:7,0:7:0.83:4,1,0	1/1:9,0:8:2.04:6,2,0	1/1:14,0:14:3.71:12,4,0	1/1:21,0:20:12.02:130,12,0	1/1:18,0:16:21.06:274,21,0	1/1:10,0:9:9.02:99,9,0	1/1:14,0:13:21:259,21,0
chr10	59797765	.	A	ACGCGCGCG	2893.86	PASS	AB=0.796;AC=35;AF=0.648;AN=54;BaseQRankSum=-8.811;DP=415;FS=6.152;HRun=0;HaplotypeScore=136.3128;InbreedingCoeff=0.4318;MQ=68.94;MQ0=4;MQRankSum=-0.613;QD=10.45;ReadPosRankSum=-6.971;VQSLOD=-0.4275;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:32:7.74:0,8,846	0/1:8,0:8:33.36:46,0,33	0/0:7,0:6:17.81:0,18,213	0/0:11,0:11:4.95:0,5,95	0/1:11,0:10:18.91:19,0,233	./.	0/0:3,11:23:0.33:0,0,0	0/1:19,0:17:90.74:91,0,173	0/0:20,0:19:24.17:0,24,714	1/1:18,0:18:30.57:335,31,0	1/1:13,0:13:3.24:79,3,0	1/1:2,5:8:0.47:1,0,0	1/1:12,0:12:5.77:65,6,0	1/1:6,0:6:8.93:64,9,0	1/1:11,0:11:9.92:123,10,0	1/1:14,0:14:14.02:103,14,0	0/1:17,0:17:32.78:33,0,158	0/0:34,0:31:56.55:0,57,1069	1/1:16,0:16:19.48:379,19,0	1/1:8,0:8:5.56:40,6,0	1/1:24,0:24:23.80:207,24,0	0/1:0,7:10:0:0,0,0	0/1:1,8:14:0:0,0,0	0/1:3,11:16:0.18:0,0,0	1/1:14,0:14:20.75:226,21,0	1/1:15,0:15:32.96:599,33,0	1/1:9,0:9:20.89:237,21,0	1/1:14,0:13:30.75:410,31,0
chr10	59800038	.	CTTT	C	1901.07	PASS	AB=0.758;AC=24;AF=0.429;AN=56;BaseQRankSum=-2.079;DP=533;FS=2.539;HRun=18;HaplotypeScore=85.2550;InbreedingCoeff=0.5991;MQ=58.30;MQ0=28;MQRankSum=-0.366;QD=8.02;ReadPosRankSum=4.004;VQSLOD=-0.4987;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:14,2:24:22.15:0,22,177	0/0:3,0:8:10.23:0,10,99	0/0:32,0:10:11.62:0,12,116	0/0:10,0:6:3.45:0,3,22	0/0:29,0:37:43.78:0,44,332	0/0:10,0:15:19.19:0,19,152	0/0:9,0:15:17.60:0,18,187	0/0:23,0:35:53.57:0,54,452	0/0:14,0:17:20.24:0,20,187	1/1:10,7:14:17.45:164,17,0	1/1:8,10:18:1.86:182,2,0	0/1:8,0:11:15.96:16,0,54	0/0:11,0:15:25.18:0,25,243	1/1:7,4:10:8.26:87,8,0	1/1:5,12:20:25.68:254,26,0	1/1:5,3:8:8.74:76,9,0	0/0:19,0:22:30.05:0,30,431	0/1:12,0:11:8.04:8,0,88	0/1:15,9:25:18.03:160,0,18	1/1:8,13:21:38.40:369,38,0	1/1:2,6:10:10.34:115,10,0	0/0:7,1:11:11.02:0,11,88	0/0:7,0:22:38.76:0,39,289	0/0:13,0:16:25.03:0,25,174	1/1:8,6:17:18.98:167,19,0	1/1:11,4:17:0.58:132,1,0	0/1:11,4:16:6.65:120,0,7	1/1:9,11:15:26.69:251,27,0
chr10	59803302	.	AC	A	22536.18	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=14.880;DP=824;FS=1.747;HRun=2;HaplotypeScore=117.2660;InbreedingCoeff=0.9997;MQ=88.03;MQ0=0;MQRankSum=-4.486;QD=35.77;ReadPosRankSum=3.084;VQSLOD=4.6118;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,147,2181	1/1:0,12:12:33.11:428,33,0	0/0:29,0:29:70.96:0,71,958	0/0:29,1:30:65.49:0,65,1072	0/0:31,0:31:87.26:0,87,1262	1/1:0,25:25:66.21:857,66,0	1/1:0,31:31:81.26:1052,81,0	1/1:0,35:35:99:1348,105,0	0/0:25,0:25:75.24:0,75,1104	1/1:1,34:35:99:1294,102,0	1/1:0,22:22:63.20:818,63,0	1/1:0,37:37:99:1285,99,0	1/1:0,22:22:63.20:818,63,0	1/1:0,34:34:90.29:1168,90,0	1/1:0,29:29:72.23:934,72,0	1/1:0,28:28:78.25:1013,78,0	1/1:0,40:40:99:1480,114,0	0/0:28,0:28:84.28:0,84,1259	1/1:1,23:24:69.21:882,69,0	1/1:2,33:35:99:1263,99,0	1/1:1,54:55:99:1831,141,0	1/1:0,24:24:63.12:796,63,0	1/1:0,22:22:60.17:779,60,0	1/1:0,31:31:90.29:1169,90,0	1/1:0,16:16:39.13:506,39,0	1/1:0,31:31:93.27:1178,93,0	1/1:0,33:33:99:1285,99,0	1/1:0,9:9:27.09:351,27,0
chr10	59804292	.	G	GT	4889.02	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-13.022;DP=599;FS=2.769;HRun=3;HaplotypeScore=53.0823;InbreedingCoeff=0.9992;MQ=84.87;MQ0=0;MQRankSum=-1.300;QD=37.32;ReadPosRankSum=0.077;VQSLOD=5.1574;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:69.21:0,69,827	0/0:19,0:19:54.14:0,54,634	0/0:20,0:20:47.90:0,48,635	0/0:16,0:16:41.99:0,42,465	0/0:31,0:31:84.22:0,84,983	1/1:2,23:25:63.21:882,63,0	1/1:1,14:15:42.14:588,42,0	0/0:32,0:32:87.25:0,87,1025	0/0:19,0:19:57.15:0,57,671	0/0:22,0:22:57.16:0,57,674	0/0:29,0:29:87.25:0,87,1031	1/1:1,26:27:72.24:1008,72,0	1/1:0,27:27:75.25:1050,75,0	0/0:18,0:18:54.17:0,54,648	0/0:29,0:29:78.24:0,78,936	0/0:25,0:25:72.21:0,72,853	0/0:19,0:19:57.15:0,57,670	0/0:14,0:14:42.13:0,42,504	0/0:18,0:18:51.16:0,51,611	0/0:21,0:21:63.19:0,63,755	0/0:17,0:17:45.14:0,45,539	1/1:0,9:9:24.08:336,24,0	1/1:0,19:20:51.13:689,51,0	1/1:0,8:8:24.08:336,24,0	0/0:25,0:25:75.23:0,75,900	0/0:17,0:17:51.16:0,51,612	0/0:40,0:40:99:0,120,1412	0/0:13,0:13:39.12:0,39,468
chr10	59805811	.	A	ATAAATGAAGTTT	76787.71	PASS	AB=0.700;AC=43;AF=0.768;AN=56;BaseQRankSum=-5.754;DP=738;FS=6.020;HRun=0;HaplotypeScore=209.6574;InbreedingCoeff=0.8934;MQ=75.48;MQ0=0;MQRankSum=-17.093;QD=131.94;ReadPosRankSum=1.867;VQSLOD=4.8764;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,102,3364	1/1:4,4:9:24.08:1148,24,0	0/0:26,0:26:69.24:0,69,2146	0/0:33,0:33:81.16:0,81,2383	0/0:26,0:25:75.24:0,75,2629	1/1:7,13:23:51.17:3077,51,0	1/1:10,6:16:33.11:1523,33,0	1/1:39,4:46:99:5699,129,0	0/0:19,0:19:54.17:0,54,1840	1/1:12,15:28:72.25:4050,72,0	1/1:15,19:37:96.33:4790,96,0	1/1:14,11:26:60.20:3336,60,0	1/1:10,14:27:66.23:3767,66,0	1/1:11,16:32:81.28:4490,81,0	1/1:12,25:41:99:5868,105,0	0/1:16,11:28:45.83:3323,0,46	1/1:14,5:21:51.18:2311,51,0	0/0:16,0:16:42.14:0,42,1490	1/1:11,6:20:51.16:2411,51,0	1/1:18,20:39:99:5774,111,0	1/1:5,3:8:12:570,12,0	1/1:8,13:22:57.20:3169,57,0	1/1:11,10:22:51.04:2672,51,0	1/1:5,6:13:24.08:1162,24,0	1/1:15,13:33:81.28:4079,81,0	1/1:15,12:30:84.25:4027,84,0	1/1:13,27:43:99:6743,114,0	1/1:5,11:16:48.16:2798,48,0
chr10	59810939	.	C	CCCTGGGA	6626.28	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-8.715;DP=674;FS=3.847;HRun=0;HaplotypeScore=151.9470;InbreedingCoeff=0.9937;MQ=80.44;MQ0=0;MQRankSum=-11.310;QD=53.87;ReadPosRankSum=0.988;VQSLOD=4.7770;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,29:37:45.09:1612,45,0	0/0:10,0:10:27.09:0,27,665	0/0:18,0:18:30:0,30,667	0/0:19,0:19:23.57:0,24,617	1/1:5,20:28:33.04:1084,33,0	0/0:25,0:25:63.14:0,63,1376	0/0:29,0:29:63.22:0,63,1525	0/0:31,0:31:66.22:0,66,1556	1/1:4,32:39:78.27:3004,78,0	0/0:23,0:23:53.78:0,54,1331	0/0:21,0:21:53.80:0,54,1222	0/0:22,0:22:60.12:0,60,1292	0/0:20,0:20:53.49:0,53,1177	0/0:29,0:29:78.24:0,78,1822	0/0:21,0:21:57.18:0,57,1324	0/0:30,0:30:72.25:0,72,1767	0/0:22,0:22:54.19:0,54,1331	1/1:3,13:19:24.08:926,24,0	0/0:24,0:24:48.15:0,48,1111	0/0:17,0:17:45.12:0,45,971	0/0:45,0:45:99:0,114,2556	0/0:21,0:21:57.20:0,57,1404	0/0:11,0:11:30.10:0,30,735	0/0:26,0:26:69.18:0,69,1599	0/0:31,0:31:81.17:0,81,1886	0/0:24,0:24:63.18:0,63,1377	0/0:24,0:24:60.10:0,60,1320	0/0:8,0:8:15.05:0,15,370
chr10	59813889	.	AT	A	11559.75	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-0.901;DP=666;FS=2.736;HRun=9;HaplotypeScore=72.0651;InbreedingCoeff=0.9779;MQ=71.27;MQ0=4;MQRankSum=-1.406;QD=22.19;ReadPosRankSum=1.537;VQSLOD=5.8611;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:90.22:0,90,1021	1/1:2,9:11:24.01:219,24,0	0/0:17,0:14:29.72:0,30,291	0/0:19,0:15:30.68:0,31,315	0/0:30,0:30:81.19:0,81,911	1/1:2,21:23:60.02:549,60,0	1/1:2,22:24:66.03:604,66,0	1/1:5,25:29:72.02:654,72,0	0/0:18,2:20:52.57:0,53,621	1/1:1,33:34:99:900,99,0	1/1:2,25:27:66.02:604,66,0	1/1:3,18:21:51.03:467,51,0	1/1:3,20:23:54.03:494,54,0	1/1:2,15:17:45.02:412,45,0	1/1:7,19:26:51.01:467,51,0	1/1:2,25:27:66.03:604,66,0	1/1:4,27:31:74.53:668,75,0	0/0:23,0:23:60.61:0,61,678	1/1:0,14:15:44.06:390,44,0	1/1:4,26:31:69.26:659,69,0	1/1:3,12:15:24.01:219,24,0	1/1:1,25:26:63.03:575,63,0	1/1:6,27:33:77.76:714,78,0	1/1:0,23:23:63.03:577,63,0	1/1:4,24:28:63.03:577,63,0	1/1:2,23:25:66.03:604,66,0	1/1:2,21:23:60.03:549,60,0	1/1:4,4:7:6:55,6,0
chr10	59822170	.	GT	G	3482.35	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=9.817;DP=517;FS=5.694;HRun=1;HaplotypeScore=52.0139;InbreedingCoeff=0.9928;MQ=86.96;MQ0=0;MQRankSum=-1.266;QD=38.69;ReadPosRankSum=2.752;VQSLOD=4.1845;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,38:38:99:1511,108,0	0/0:5,0:5:15.05:0,15,237	0/0:20,0:21:60.20:0,60,910	0/0:22,0:22:23.18:0,23,805	1/1:0,21:21:57.19:797,57,0	0/0:19,0:19:57.19:0,57,911	0/0:16,0:16:48.16:0,48,767	0/0:19,0:19:57.19:0,57,910	1/1:0,8:8:21.07:294,21,0	0/0:21,0:21:63.21:0,63,974	0/0:13,0:13:39.13:0,39,623	0/0:16,0:16:48.16:0,48,765	0/0:17,0:17:51.17:0,51,813	0/0:18,0:18:54.17:0,54,839	0/0:23,0:23:69.24:0,69,1103	0/0:17,0:17:51.17:0,51,815	0/0:46,0:46:99:0,138,2183	1/1:0,23:23:63.21:881,63,0	0/0:11,0:11:33.11:0,33,525	0/0:17,0:17:51.16:0,51,790	0/0:24,0:24:72.25:0,72,1146	0/0:8,0:8:24.08:0,24,384	0/0:14,0:14:42.14:0,42,663	0/0:13,0:13:39.13:0,39,624	0/0:19,0:19:54.18:0,54,850	0/0:16,0:16:48.16:0,48,768	0/0:23,0:23:69.22:0,69,1079	0/0:9,0:9:27.09:0,27,431
chr10	59823046	.	CA	C	5465.40	PASS	AB=0.734;AC=37;AF=0.661;AN=56;BaseQRankSum=0.862;DP=544;FS=6.859;HRun=13;HaplotypeScore=66.0113;InbreedingCoeff=0.5530;MQ=71.21;MQ0=3;MQRankSum=0.904;QD=13.33;ReadPosRankSum=3.007;VQSLOD=5.2325;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:42.02:0,42,389	0/0:1,0:4:8.52:0,9,43	0/1:19,1:13:29.80:30,0,35	0/0:14,0:11:9.54:0,10,114	0/0:30,4:34:0.38:0,0,489	1/1:5,16:22:23.56:327,24,0	1/1:2,8:11:25.88:179,26,0	0/0:8,0:23:48.93:0,49,294	0/1:12,2:14:4.69:5,0,273	1/1:3,20:24:58.71:422,59,0	1/1:1,26:27:71.58:525,72,0	1/1:2,17:19:47.72:349,48,0	1/1:4,10:15:28.86:203,29,0	1/1:6,7:13:23.85:174,24,0	1/1:4,14:20:27.71:273,28,0	1/1:2,11:13:32.80:240,33,0	0/0:5,0:27:46.78:0,47,265	0/0:15,0:15:23.18:0,23,372	0/1:7,5:13:9.26:95,0,9	1/1:2,23:26:64.64:465,65,0	1/1:3,8:11:6.11:173,6,0	1/1:6,11:19:7.70:201,8,0	1/1:3,12:18:38.88:258,39,0	1/1:5,8:15:24.91:165,25,0	0/1:8,23:32:13.96:392,0,14	1/1:5,23:29:67.60:485,68,0	1/1:12,23:39:42.96:409,43,0	0/1:3,6:10:9.26:95,0,9
chr10	59823274	.	C	CT	2722.62	PASS	AB=0.763;AC=41;AF=0.732;AN=56;BaseQRankSum=2.757;DP=481;FS=0.000;HRun=15;HaplotypeScore=96.1019;InbreedingCoeff=0.1140;MQ=65.06;MQ0=6;MQRankSum=-3.447;QD=6.44;ReadPosRankSum=-3.794;VQSLOD=1.7606;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:26,5:31:54.77:55,0,238	1/1:6,0:9:9.58:48,10,0	0/0:14,0:11:1.19:0,1,18	0/1:12,0:8:1.81:2,0,12	0/0:23,1:24:13.18:0,13,177	1/1:8,1:21:31.63:176,32,0	1/1:3,3:9:16.26:107,16,0	1/1:29,0:33:46.69:250,47,0	0/0:15,0:15:5.70:0,6,38	1/1:10,7:19:8.94:165,9,0	1/1:8,6:14:2.49:167,2,0	1/1:13,0:16:17.54:93,18,0	1/1:13,0:14:16.15:105,16,0	0/1:6,2:8:6.25:46,0,6	0/1:12,12:24:0.03:108,0,0	1/1:10,7:17:18.78:140,19,0	1/1:10,0:20:23.72:120,24,0	1/1:9,11:19:24.44:203,24,0	0/1:11,3:14:17:73,0,17	1/1:4,6:11:1.90:107,2,0	0/1:5,6:11:20.58:62,0,21	1/1:3,0:8:17.20:91,17,0	1/1:4,0:9:9.59:54,10,0	0/1:8,6:16:5.81:32,0,6	1/1:8,14:22:3.60:235,4,0	1/1:9,8:18:9.22:168,9,0	0/1:22,4:28:20.93:132,0,21	0/1:4,6:11:9.21:138,0,9
chr10	59823452	.	G	GTAGA	1787.55	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-6.210;DP=651;FS=6.282;HRun=0;HaplotypeScore=124.0197;InbreedingCoeff=0.9459;MQ=54.82;MQ0=15;MQRankSum=-1.889;QD=27.08;ReadPosRankSum=-2.580;VQSLOD=2.6015;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:32:66.12:0,66,1042	1/1:9,3:12:18.05:333,18,0	0/0:24,0:12:8.08:0,8,274	0/0:31,0:12:7.87:0,8,158	0/0:31,0:31:84.18:0,84,1335	0/0:18,0:18:48.11:0,48,724	0/0:21,0:21:49.92:0,50,715	1/1:4,21:26:63.06:855,63,0	0/0:24,0:24:69.20:0,69,1145	0/0:26,0:24:57.18:0,57,944	0/0:26,0:26:39.05:0,39,659	0/0:28,0:28:78.26:0,78,1327	0/0:23,0:23:60.08:0,60,896	0/0:17,0:16:29.70:0,30,427	0/0:23,0:22:48.27:0,48,656	0/0:22,0:21:47.98:0,48,680	1/1:7,21:27:33.04:741,33,0	0/0:20,0:20:48.12:0,48,768	0/0:12,0:11:21.02:0,21,287	0/0:27,0:27:54.10:0,54,877	0/0:20,0:20:44.93:0,45,664	0/0:25,0:25:63.11:0,63,931	0/0:23,0:23:57.13:0,57,882	0/0:26,0:26:72.21:0,72,1192	0/0:24,0:24:54.17:0,54,940	0/0:26,0:26:72.15:0,72,1054	0/0:24,0:24:56.93:0,57,883	0/0:10,0:10:30.07:0,30,506
chr10	59823488	.	GTAGGTAGA	G	6687.16	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=11.341;DP=698;FS=11.436;HRun=0;HaplotypeScore=169.9116;InbreedingCoeff=0.9053;MQ=52.30;MQ0=28;MQRankSum=-5.779;QD=18.58;ReadPosRankSum=-1.986;VQSLOD=3.4193;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:25:33.04:0,33,1152	1/1:3,5:8:9.03:224,9,0	0/0:33,0:9:3.01:0,3,68	0/0:26,0:3:2.90:0,3,16	0/0:35,0:35:69.24:0,69,2584	0/0:20,0:20:39.02:0,39,1419	0/0:17,0:16:27.09:0,27,831	1/1:27,0:27:15.04:296,15,0	0/0:28,0:28:48.16:0,48,1546	1/1:11,9:18:27.04:491,27,0	1/1:10,25:35:15.01:284,15,0	0/0:33,0:33:63.20:0,63,2143	0/0:25,0:25:60.21:0,60,2164	1/1:8,14:21:8.63:222,9,0	1/1:7,15:21:21.07:515,21,0	1/1:11,16:26:17.89:451,18,0	1/1:21,3:22:30.02:661,30,0	0/0:24,0:24:39.13:0,39,1450	1/1:14,12:22:39.08:894,39,0	1/1:12,18:30:26.85:449,27,0	1/1:13,6:19:5.98:129,6,0	0/0:22,0:22:39.13:0,39,1299	0/0:22,0:22:42.14:0,42,1435	0/0:27,0:27:39.13:0,39,1492	1/1:16,16:32:12.04:289,12,0	1/1:13,13:26:45.14:1034,45,0	1/1:10,18:28:14.17:374,14,0	1/1:9,5:14:15.05:373,15,0
chr10	59826920	.	T	TGG	5041.25	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=13.193;DP=596;FS=9.162;HRun=6;HaplotypeScore=145.3018;InbreedingCoeff=0.8990;MQ=93.94;MQ0=0;MQRankSum=-5.719;QD=12.12;ReadPosRankSum=-3.067;VQSLOD=0.6040;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,114,1376	1/1:5,0:6:2.90:16,3,0	0/0:33,0:33:81.21:0,81,955	0/0:26,0:26:63.19:0,63,762	0/0:30,0:29:81.21:0,81,971	1/1:19,0:19:9.02:103,9,0	1/1:22,0:23:28.78:305,29,0	1/1:12,4:17:21.30:190,21,0	0/0:30,0:30:87.23:0,87,1024	1/1:3,0:17:28.14:209,28,0	1/1:6,0:18:29.73:224,30,0	1/1:24,0:24:21.03:244,21,0	1/1:17,0:17:27.06:301,27,0	1/1:6,0:19:17.31:213,17,0	1/1:6,0:28:50.67:366,51,0	1/1:6,0:27:53.54:381,54,0	1/1:14,1:20:15.04:167,15,0	0/0:17,0:17:39.08:0,39,460	1/1:13,1:26:56.65:439,57,0	1/1:2,0:19:34.82:225,35,0	1/1:13,0:25:22.62:342,23,0	1/1:16,0:17:11.88:97,12,0	1/1:12,0:12:3:26,3,0	1/1:15,0:15:16.44:183,16,0	1/1:2,0:12:29.75:210,30,0	1/1:4,0:27:58.75:415,59,0	1/1:9,0:20:12.18:265,12,0	1/1:0,0:6:17.78:121,18,0
chr10	59828931	.	G	GA	2252.86	PASS	AB=0.668;AC=32;AF=0.571;AN=56;BaseQRankSum=-3.852;DP=563;FS=5.179;HRun=15;HaplotypeScore=65.5584;InbreedingCoeff=0.2561;MQ=53.55;MQ0=22;MQRankSum=1.483;QD=5.14;ReadPosRankSum=-3.428;VQSLOD=1.3527;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:21,20:40:6.63:106,0,7	1/1:3,1:7:8.83:65,9,0	0/1:21,0:8:4.06:4,0,28	0/0:23,0:8:13.13:0,13,65	1/1:12,8:20:5.43:114,5,0	0/0:7,0:15:17.08:0,17,59	0/0:12,0:25:21.40:0,21,60	0/1:16,18:34:0.26:302,0,0	1/1:14,0:14:8.20:130,8,0	0/1:10,15:24:15.15:209,0,15	0/1:5,10:14:1.71:80,0,2	0/0:8,0:16:7.26:0,7,22	0/0:8,0:8:1.83:0,2,7	1/1:14,1:15:24.62:154,25,0	1/1:5,17:21:8.99:76,9,0	0/1:8,10:17:8.30:41,0,8	1/1:27,5:27:29.65:232,30,0	1/1:18,2:18:7.91:145,8,0	0/1:8,10:18:3.59:157,0,4	0/1:8,13:20:28.49:69,0,28	1/1:5,9:12:3:25,3,0	0/0:9,0:15:13.19:0,13,46	1/1:3,0:13:0.42:1,0,0	0/0:6,0:19:15.69:0,16,57	0/1:7,16:24:14.17:117,0,14	1/1:13,4:31:47.13:295,47,0	1/1:5,0:12:2.84:14,3,0	0/1:8,10:15:2.99:86,0,3
chr10	59829141	.	GA	G	6740.78	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=13.404;DP=584;FS=1.416;HRun=8;HaplotypeScore=56.4014;InbreedingCoeff=0.9918;MQ=73.22;MQ0=0;MQRankSum=0.031;QD=25.44;ReadPosRankSum=2.532;VQSLOD=5.6714;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,99,1184	0/0:7,0:7:21.06:0,21,253	0/0:10,0:10:9.86:0,10,269	0/0:13,0:12:21.04:0,21,235	0/0:26,0:26:66.19:0,66,787	0/0:21,0:21:63.19:0,63,761	0/0:15,0:15:36.11:0,36,435	0/0:34,0:33:90.27:0,90,1078	0/0:17,0:17:51.16:0,51,616	1/1:3,21:24:63.05:599,63,0	1/1:2,16:18:48.08:464,48,0	0/0:23,0:23:63.14:0,63,726	0/0:16,0:16:45.13:0,45,529	1/1:6,19:25:54.08:521,54,0	1/1:2,24:26:72.11:695,72,0	1/1:0,21:21:57.09:550,57,0	0/0:11,0:11:30.09:0,30,362	0/0:16,0:16:42.13:0,42,506	1/1:1,17:18:51.08:493,51,0	1/1:1,16:17:48.08:464,48,0	1/1:0,26:26:69.11:666,69,0	0/0:32,0:32:96.29:0,96,1149	0/0:23,0:23:66.20:0,66,797	0/0:21,0:21:54.08:0,54,619	1/1:1,13:14:27.04:261,27,0	1/1:2,27:29:78.12:753,78,0	1/1:1,25:26:72.12:695,72,0	1/1:1,20:21:60.10:579,60,0
chr10	59833117	.	TACACAC	T	8287.63	PASS	AB=0.645;AC=37;AF=0.661;AN=56;BaseQRankSum=1.404;DP=606;FS=8.700;HRun=0;HaplotypeScore=156.2582;InbreedingCoeff=0.5071;MQ=62.65;MQ0=4;MQRankSum=-3.892;QD=17.41;ReadPosRankSum=4.868;VQSLOD=3.3351;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:20,8:28:12.51:224,13,0	0/0:6,0:12:14.28:0,14,250	0/0:24,0:13:3.01:0,3,97	0/0:27,0:25:12.04:0,12,227	1/1:9,12:21:27.09:548,27,0	0/1:10,0:15:1.12:1,0,17	0/1:3,0:13:6.22:6,0,32	0/0:14,0:26:40.37:0,40,586	1/1:8,13:22:36.12:722,36,0	1/1:14,12:27:32.28:555,32,0	1/1:12,11:23:21.07:433,21,0	0/1:12,2:32:4.04:123,0,4	0/1:10,1:26:9.65:62,0,10	1/1:5,10:17:33.11:635,33,0	1/1:10,16:27:32.85:660,33,0	1/1:9,16:25:35.82:742,36,0	0/0:11,0:29:47.81:0,48,629	1/1:7,5:13:9.92:187,10,0	0/0:12,0:12:1.25:0,1,3	1/1:6,13:19:27.09:557,27,0	1/1:17,4:21:6.02:124,6,0	0/1:6,1:16:6.03:52,0,6	0/1:6,0:12:0.51:1,0,1	0/1:16,0:30:5.17:5,0,27	1/1:6,18:25:15.16:677,15,0	1/1:10,18:28:54.10:946,54,0	1/1:10,14:24:36.12:742,36,0	1/1:6,6:12:15.05:287,15,0
chr10	59836396	.	C	CT	7784.47	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-14.463;DP=608;FS=1.480;HRun=9;HaplotypeScore=61.1693;InbreedingCoeff=0.9898;MQ=61.37;MQ0=2;MQRankSum=-0.307;QD=24.63;ReadPosRankSum=-0.672;VQSLOD=5.3841;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,1:29:71.97:0,72,626	1/1:4,5:9:12.03:133,12,0	0/0:23,0:19:35.20:0,35,290	0/0:16,0:10:20.81:0,21,165	0/0:34,0:34:83.38:0,83,728	0/0:27,0:27:74.98:0,75,649	0/0:16,0:16:44.99:0,45,391	1/1:12,30:42:67.19:970,67,0	0/0:21,1:22:20.47:0,20,390	1/1:10,14:24:19.06:439,19,0	1/1:0,16:16:42.07:451,42,0	0/0:20,3:23:26.81:0,27,462	0/0:12,0:12:26.97:0,27,234	1/1:3,14:17:42.11:464,42,0	1/1:4,18:22:42.11:465,42,0	1/1:0,19:19:54.15:597,54,0	1/1:2,20:23:62.84:659,63,0	0/0:33,0:33:92.90:0,93,798	1/1:4,19:21:45.10:486,45,0	1/1:7,18:25:54.11:585,54,0	1/1:3,14:17:39.11:431,39,0	0/0:19,0:19:44.96:0,45,387	0/0:21,1:22:14.79:0,15,357	0/0:16,0:16:38.90:0,39,325	1/1:2,13:15:30.08:332,30,0	1/1:1,24:24:69.19:763,69,0	1/1:2,30:33:75.04:811,75,0	1/1:0,6:6:18.05:199,18,0
chr10	59839067	.	CAGAGAGAGAGAGAGAGAG	C	3670.69	PASS	AB=0.871;AC=19;AF=0.365;AN=52;BaseQRankSum=6.997;DP=546;FS=31.479;HRun=0;HaplotypeScore=226.1099;InbreedingCoeff=0.5629;MQ=65.95;MQ0=11;MQRankSum=-5.507;QD=20.39;ReadPosRankSum=0.983;VQSLOD=1.2764;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:33:8.67:0,9,207	0/0:6,0:6:3.90:0,4,94	0/0:33,0:19:3.01:0,3,43	0/0:37,0:18:5.04:0,5,49	0/0:23,0:23:18.06:0,18,357	0/0:19,0:18:28.34:0,28,1844	0/0:26,0:26:22.28:0,22,1012	0/0:38,0:38:52.34:0,52,1822	0/1:9,0:12:46:46,0,142	1/1:13,3:16:6.01:196,6,0	1/1:12,6:19:9.03:404,9,0	0/0:21,0:22:36.59:0,37,2378	0/0:23,0:23:24.54:0,25,1239	1/1:9,1:10:3.01:145,3,0	1/1:12,1:15:9.03:396,9,0	1/1:14,9:23:24.08:1138,24,0	0/0:12,0:12:13.29:0,13,540	0/0:18,0:17:9:0,9,217	0/1:14,0:14:8.46:53,0,8	1/1:15,7:23:11.05:552,11,0	./.	0/0:16,0:16:15.52:0,16,704	0/0:15,0:15:12.04:0,12,777	0/0:17,0:17:15.01:0,15,662	1/1:12,7:20:9.03:379,9,0	0/1:10,0:12:49.01:73,0,49	1/1:10,5:15:6.02:289,6,0	./.
chr10	59839116	.	A	AGG	1600.97	PASS	AB=0.797;AC=10;AF=0.179;AN=56;BaseQRankSum=0.002;DP=566;FS=6.049;HRun=1;HaplotypeScore=99.6463;InbreedingCoeff=0.4174;MQ=58.83;MQ0=14;MQRankSum=1.394;QD=9.82;ReadPosRankSum=0.818;VQSLOD=0.3914;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:53.46:0,53,420	0/0:10,0:10:18.46:0,18,152	0/0:25,0:8:22.28:0,22,218	0/0:43,0:19:44.81:0,45,448	0/0:13,0:12:26.97:0,27,224	0/1:26,0:26:13.07:351,0,13	0/1:10,18:28:13.47:59,0,13	0/0:40,0:40:99:0,108,916	0/0:18,0:18:41.88:0,42,337	0/0:18,0:18:50.98:0,51,464	0/0:17,0:16:29.71:0,30,228	0/1:28,0:28:29.05:375,0,29	0/1:6,0:21:44.66:45,0,48	0/0:19,0:19:47.95:0,48,405	0/0:14,0:14:26.91:0,27,214	0/0:18,0:17:47.70:0,48,360	0/0:15,0:15:14.70:0,15,201	0/0:14,0:13:26.79:0,27,202	0/0:11,0:11:32.93:0,33,279	0/0:19,0:19:35.83:0,36,278	0/0:17,0:17:41.96:0,42,354	1/1:20,0:20:50.54:411,51,0	1/1:24,0:23:2.38:324,2,0	1/1:15,0:15:4.49:184,4,0	0/0:17,0:17:23.94:0,24,196	0/0:22,0:22:63.28:0,63,562	0/0:12,0:12:25.72:0,26,191	0/0:11,0:10:23.91:0,24,190
chr10	59849749	.	TCCCTCCCTCA	T	13895.29	PASS	AB=1.000;AC=43;AF=0.796;AN=54;BaseQRankSum=8.133;DP=613;FS=8.654;HRun=0;HaplotypeScore=187.3311;InbreedingCoeff=0.6837;MQ=68.46;MQ0=4;MQRankSum=-6.301;QD=28.36;ReadPosRankSum=1.977;VQSLOD=3.7838;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:75.26:0,75,3293	1/1:5,0:5:3.01:65,3,0	0/0:17,0:16:0.85:0,1,95	0/1:34,0:21:12.66:13,0,309	0/0:16,0:16:36.12:0,36,1331	1/1:6,16:22:21.07:607,21,0	1/1:4,22:26:15.05:457,15,0	1/1:13,18:31:51.03:965,51,0	0/0:9,0:9:15.05:0,15,583	1/1:5,15:20:42.06:891,42,0	1/1:7,6:13:8.99:167,9,0	1/1:7,18:25:17.93:550,18,0	1/1:10,30:40:56.33:1737,56,0	1/1:5,18:23:33.11:973,33,0	1/1:8,22:30:38.85:1190,39,0	1/1:7,16:23:17.74:551,18,0	1/1:6,14:20:11.92:367,12,0	0/0:17,0:17:33.07:0,33,1288	1/1:16,15:30:39.02:777,39,0	1/1:3,10:13:21.02:533,21,0	./.	1/1:6,14:20:21.07:567,21,0	1/1:3,4:7:2.85:92,3,0	1/1:5,15:20:14.93:342,15,0	1/1:8,12:19:6.02:184,6,0	1/1:4,22:26:63.21:1635,63,0	1/1:5,19:24:32.64:878,33,0	1/1:8,9:17:2.24:355,2,0
chr10	59849760	.	CCCTCCCTCA	C	7113.92	PASS	AB=0.994;AC=23;AF=0.411;AN=56;BaseQRankSum=13.180;DP=569;FS=1.295;HRun=0;HaplotypeScore=187.0725;InbreedingCoeff=-0.4029;MQ=65.42;MQ0=4;MQRankSum=-8.722;QD=17.35;ReadPosRankSum=10.433;VQSLOD=2.6370;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:96.32:0,96,3782	0/1:2,0:2:10.08:23,0,10	0/0:22,0:17:18.81:0,19,581	0/0:34,0:21:29.66:0,30,777	0/0:16,0:16:48.15:0,48,1676	0/1:23,0:23:99:323,0,131	0/1:26,0:26:83.88:253,0,84	0/1:27,0:26:99:327,0,186	0/0:7,0:7:21.07:0,21,782	0/1:19,0:19:96.84:383,0,97	0/1:10,0:10:57.71:58,0,105	0/1:22,0:22:99:306,0,114	0/1:36,1:37:99:990,0,107	1/1:18,2:20:33.08:579,33,0	1/1:23,1:24:39.04:728,39,0	0/1:23,0:23:99:300,0,180	0/1:17,1:18:21:211,0,21	0/0:17,0:17:48.16:0,48,1626	0/1:24,0:23:99:304,0,279	0/1:11,0:11:61.72:271,0,62	0/0:29,0:28:6.02:0,6,70	0/1:17,0:17:20.21:289,0,20	0/1:5,0:5:30.34:50,0,30	0/1:21,0:22:99:144,0,130	0/1:19,0:18:91.05:97,0,91	0/1:27,0:27:99:811,0,146	0/1:21,1:22:18.32:466,0,18	0/1:11,0:12:66.38:203,0,66
chr10	59850112	.	GGT	G	2879.99	PASS	AB=0.941;AC=13;AF=0.232;AN=56;BaseQRankSum=6.115;DP=1060;FS=1.729;HRun=0;HaplotypeScore=162.7675;InbreedingCoeff=0.4677;MQ=52.13;MQ0=50;MQRankSum=1.321;QD=10.18;ReadPosRankSum=1.821;VQSLOD=3.6487;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:21,26:45:17.17:985,17,0	0/1:12,1:12:12.61:13,0,284	0/0:67,0:2:3.01:0,3,49	0/0:73,0:6:12.03:0,12,163	1/1:3,15:18:35.94:400,36,0	0/0:18,0:18:51.16:0,51,787	0/0:39,0:39:70.51:0,71,1134	0/0:53,0:49:95.34:0,95,1423	1/1:5,23:28:54:636,54,0	0/0:43,0:41:42.38:0,42,1156	0/0:17,0:17:36.12:0,36,581	0/0:40,0:38:76.14:0,76,1193	0/1:43,2:45:7.61:8,0,1358	0/0:38,1:39:53.63:0,54,1365	0/0:31,0:30:55.42:0,55,843	0/0:30,0:30:60.20:0,60,931	0/0:48,0:48:93.91:0,94,1920	1/1:12,25:36:20.07:899,20,0	0/0:21,0:15:24.03:0,24,319	0/0:26,1:28:27.74:0,28,640	0/0:117,1:118:99:0,201,3653	0/0:28,0:28:54.85:0,55,763	0/1:13,1:14:9.64:10,0,296	0/0:52,1:52:99:0,113,1699	0/1:25,3:28:81.75:82,0,653	0/1:50,1:48:21.51:22,0,1075	0/0:23,1:24:9.93:0,10,684	0/0:5,0:4:6.02:0,6,97
chr10	59850138	.	ATG	A	1454.79	PASS	AB=0.942;AC=5;AF=0.089;AN=56;BaseQRankSum=0.052;DP=974;FS=12.100;HRun=0;HaplotypeScore=167.4421;InbreedingCoeff=0.6024;MQ=51.72;MQ0=57;MQRankSum=-1.544;QD=13.60;ReadPosRankSum=-2.306;VQSLOD=2.5407;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:42:98.82:0,99,1667	1/1:10,0:9:5:169,5,0	0/0:57,0:2:3.01:0,3,34	0/0:63,0:2:3.01:0,3,44	0/0:23,0:23:47.62:0,48,738	0/0:22,0:22:54.18:0,54,921	0/0:33,0:33:75.15:0,75,1176	1/1:47,1:40:64.57:788,65,0	0/0:27,0:26:57.11:0,57,895	0/0:38,0:34:84.26:0,84,1396	0/0:17,0:17:27.09:0,27,461	0/0:31,0:31:76.75:0,77,1007	0/0:35,0:34:87.28:0,87,1412	0/0:39,0:38:78.25:0,78,1272	0/0:28,0:27:58.42:0,58,928	0/0:26,0:26:60.03:0,60,975	0/1:46,3:49:62.29:618,0,62	0/0:35,0:35:73.66:0,74,1398	0/0:24,0:15:31.84:0,32,411	0/0:23,0:23:47.64:0,48,753	0/0:111,1:110:99:0,229,3701	0/0:31,0:31:74.46:0,74,1127	0/0:17,0:16:39.13:0,39,669	0/0:54,0:53:99:0,123,2014	0/0:25,0:25:57.28:0,57,859	0/0:38,0:35:95.47:0,95,1492	0/0:16,0:16:46.95:0,47,726	0/0:7,0:6:12.04:0,12,207
chr10	59850200	.	GGT	G	7135.40	PASS	AB=0.957;AC=27;AF=0.482;AN=56;BaseQRankSum=6.174;DP=986;FS=0.318;HRun=0;HaplotypeScore=149.3689;InbreedingCoeff=0.7189;MQ=54.94;MQ0=58;MQRankSum=1.998;QD=14.30;ReadPosRankSum=0.542;VQSLOD=4.8209;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,3:46:10.04:0,10,1325	0/1:14,2:13:38.99:39,0,319	0/0:50,0:8:9.14:0,9,94	0/0:58,0:8:7.26:0,7,67	0/0:25,0:24:15.95:0,16,720	0/1:16,0:16:77.71:78,0,317	0/0:31,0:30:36.26:0,36,1021	0/1:56,1:41:12.53:13,0,698	0/0:24,0:23:42.90:0,43,691	1/1:19,25:40:56.99:870,57,0	1/1:5,13:17:30.01:360,30,0	0/0:39,0:35:84.24:0,84,1259	0/0:37,2:36:12.80:0,13,1114	1/1:11,16:28:6.05:366,6,0	1/1:10,26:34:25.68:649,26,0	1/1:13,29:39:21.23:743,21,0	0/0:22,1:21:7.45:0,7,509	0/0:22,0:23:39.89:0,40,762	1/1:11,7:16:23.88:249,24,0	1/1:11,17:28:36.02:399,36,0	1/1:67,44:113:99:2029,173,0	0/0:38,1:38:74.30:0,74,1118	0/0:30,0:30:69.20:0,69,1024	0/0:54,0:50:69.29:0,69,1379	1/1:8,7:13:11.06:113,11,0	1/1:12,21:32:74.71:817,75,0	1/1:3,9:12:26.91:302,27,0	1/1:9,1:9:9.02:108,9,0
chr10	59850411	.	GTGTGTGTGTGTGGTGTGTA	G	4696.44	PASS	AB=0.810;AC=13;AF=0.232;AN=56;BaseQRankSum=5.396;DP=1137;FS=21.029;HRun=0;HaplotypeScore=464.6071;InbreedingCoeff=0.6709;MQ=51.29;MQ0=43;MQRankSum=-7.312;QD=15.50;ReadPosRankSum=-2.096;VQSLOD=1.4966;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:61,0:61:99:0,158,8559	0/0:14,0:13:36.05:0,36,1343	0/0:26,0:4:6.02:0,6,112	0/0:42,0:10:10.58:0,11,148	0/0:32,0:32:78.27:0,78,4165	1/1:15,3:17:39.09:981,39,0	0/1:7,44:51:26.58:188,0,27	0/0:57,0:53:99:0,132,4679	0/0:56,0:54:99:0,141,7428	0/0:58,0:54:99:0,126,5690	0/0:18,0:18:30.10:0,30,1612	1/1:8,61:68:35.97:1516,36,0	1/1:9,32:41:12.51:528,13,0	0/0:56,0:53:99:0,135,7211	0/0:41,0:41:99:0,108,5455	0/0:43,0:43:99:0,114,6347	0/0:37,0:37:99:0,105,5406	0/1:26,0:25:14.34:14,0,3059	0/0:36,0:19:51.16:0,51,1994	0/0:37,0:35:78.08:0,78,4383	0/0:110,0:105:99:0,245,12881	1/1:18,6:24:17.85:520,18,0	1/1:1,30:31:14.75:261,15,0	0/1:37,5:38:15.13:688,0,15	0/0:24,0:24:63.22:0,63,2709	0/0:47,0:44:99:0,116,5910	0/0:23,0:22:66.18:0,66,3529	0/0:14,0:13:39.13:0,39,2299
chr10	59850422	.	T	TGA	715.71	PASS	AB=0.879;AC=11;AF=0.196;AN=56;BaseQRankSum=10.203;DP=1145;FS=34.224;HRun=0;HaplotypeScore=209.2107;InbreedingCoeff=0.4104;MQ=52.22;MQ0=46;MQRankSum=-5.701;QD=2.49;ReadPosRankSum=0.139;VQSLOD=1.2134;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:65,0:65:99:0,168,2286	0/0:15,0:14:32.89:0,33,378	0/1:25,0:3:0.98:1,0,16	0/0:38,0:6:9:0,9,101	0/0:31,0:31:75.19:0,75,1040	0/1:10,8:18:72.19:228,0,72	1/1:46,0:46:5.76:75,6,0	0/0:60,0:56:99:0,130,1892	0/0:58,0:56:99:0,162,2051	0/0:56,0:52:99:0,144,1923	0/0:17,0:17:30.04:0,30,371	0/1:62,0:62:6.82:81,0,7	1/1:35,0:34:10.86:115,11,0	0/0:63,0:60:99:0,146,2020	0/0:41,0:42:99:0,110,1488	0/0:40,0:40:99:0,114,1581	0/0:39,0:41:89.17:0,89,1229	0/0:28,0:28:70.61:0,71,912	0/0:33,0:16:45.09:0,45,575	0/0:35,0:33:77.89:0,78,1103	0/0:113,0:113:99:0,254,3323	0/1:23,4:27:84.97:105,0,85	1/1:30,0:30:5.84:74,6,0	0/1:36,9:41:99:184,0,155	0/0:23,0:23:60.02:0,60,777	0/0:52,0:49:99:0,132,1758	0/0:24,0:23:69.14:0,69,932	0/0:15,0:14:42.05:0,42,546
chr10	59850802	.	AGT	A	1473.31	PASS	AC=8;AF=0.148;AN=54;BaseQRankSum=-6.854;DP=943;FS=5.979;HRun=0;HaplotypeScore=184.4582;InbreedingCoeff=0.7224;MQ=50.73;MQ0=21;MQRankSum=2.711;QD=10.52;ReadPosRankSum=3.888;VQSLOD=3.1009;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:46,14:59:86.11:886,86,0	0/0:6,0:12:5.04:0,5,32	./.	0/0:47,0:16:3:0,3,39	1/1:14,7:21:17.98:175,18,0	0/0:6,0:22:8.93:0,9,68	0/0:14,0:36:11.73:0,12,80	0/0:40,0:39:17.27:0,17,120	1/1:16,17:35:30.39:316,30,0	0/0:27,0:49:54.32:0,54,423	0/0:6,0:15:13.39:0,13,91	0/0:39,0:45:37.62:0,38,170	0/0:31,0:32:28.10:0,28,210	0/0:15,0:39:13.51:0,14,79	0/0:20,0:31:16.53:0,17,120	0/0:10,0:36:17.48:0,17,128	0/0:26,0:34:39.84:0,40,332	1/1:17,5:23:1.20:242,1,0	0/0:32,0:26:15.81:0,16,130	0/0:16,0:27:14.02:0,14,102	0/0:55,0:56:18.04:0,18,128	0/0:18,0:33:18.26:0,18,100	0/0:21,0:21:9.81:0,10,92	0/0:31,0:32:18.08:0,18,164	0/0:17,0:32:5.40:0,5,44	0/0:28,0:45:55.57:0,56,433	0/0:18,0:18:16.44:0,16,130	0/0:6,0:7:3:0,3,26
chr10	59853098	.	G	GGAC	5471.91	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=-10.408;DP=551;FS=5.582;HRun=0;HaplotypeScore=79.2167;InbreedingCoeff=0.8885;MQ=75.13;MQ0=0;MQRankSum=-0.496;QD=44.85;ReadPosRankSum=1.661;VQSLOD=6.4813;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,129,2130	0/0:9,0:9:23.95:0,24,364	0/0:11,0:12:29.84:0,30,427	0/1:11,0:11:1.90:2,0,284	0/0:12,0:12:26.95:0,27,446	1/1:2,10:13:21.07:475,21,0	1/1:4,23:27:60.21:1355,60,0	0/0:24,0:24:63.20:0,63,996	0/0:18,0:18:51.17:0,51,841	0/0:24,0:24:69.24:0,69,1138	0/0:8,0:8:24.08:0,24,388	1/1:1,12:13:39.13:851,39,0	1/1:0,15:15:39.13:879,39,0	0/0:17,0:17:48.15:0,48,765	0/0:17,0:17:45.14:0,45,725	0/0:16,0:16:42.13:0,42,675	0/0:32,0:32:96.32:0,96,1575	0/0:41,0:41:99:0,117,1886	0/0:23,0:23:63.20:0,63,1025	0/0:7,0:7:15.05:0,15,250	0/0:75,0:75:99:0,220,3513	1/1:1,2:4:3.01:37,3,0	1/1:1,8:10:21.07:447,21,0	1/1:1,28:29:63.69:1426,64,0	0/0:14,0:14:42.14:0,42,700	0/0:18,0:18:54.18:0,54,876	0/0:13,0:13:39.13:0,39,647	0/0:2,0:2:6.02:0,6,100
chr10	59854410	.	AG	A	1145.74	PASS	AB=0.879;AC=10;AF=0.179;AN=56;BaseQRankSum=9.762;DP=253;FS=7.475;HRun=4;HaplotypeScore=62.3126;InbreedingCoeff=0.6048;MQ=83.90;MQ0=0;MQRankSum=-8.978;QD=13.32;ReadPosRankSum=1.733;VQSLOD=1.6942;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,24:32:64.81:602,65,0	0/0:2,0:2:6.02:0,6,84	0/0:15,0:15:24.07:0,24,406	0/0:16,0:14:15.43:0,15,361	1/1:6,8:14:22.49:214,22,0	0/0:5,0:5:12.04:0,12,163	0/0:10,0:10:30.08:0,30,400	0/0:9,0:9:21.07:0,21,282	1/1:5,11:16:17.38:285,17,0	0/0:7,0:6:18.05:0,18,238	0/0:4,0:4:8.96:0,9,126	0/1:8,1:9:11.94:12,0,254	0/1:5,1:6:15.70:16,0,190	0/0:10,0:10:27.08:0,27,361	0/0:12,0:12:30.10:0,30,420	0/0:8,0:8:15.05:0,15,210	0/0:7,0:7:21.07:0,21,294	1/1:2,7:8:18:180,18,0	0/0:7,0:7:15.25:0,15,233	0/0:4,0:4:9.03:0,9,126	0/0:17,0:17:39.09:0,39,523	0/0:4,1:5:6.23:0,6,85	0/0:3,0:3:6.02:0,6,84	0/0:8,0:8:24.08:0,24,327	0/0:3,0:3:9.03:0,9,126	0/0:9,0:9:27.09:0,27,378	0/0:3,0:3:2.69:0,3,79	0/0:2,0:2:6.02:0,6,84
chr10	59854424	.	G	GAGAA	1219.52	PASS	AB=0.769;AC=5;AF=0.089;AN=56;BaseQRankSum=8.271;DP=196;FS=0.000;HRun=0;HaplotypeScore=67.6775;InbreedingCoeff=0.1843;MQ=71.01;MQ0=0;MQRankSum=-7.052;QD=19.99;ReadPosRankSum=5.065;VQSLOD=2.8950;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:22,8:31:42.68:500,0,43	0/0:1,0:1:3.01:0,3,63	0/0:13,0:12:36.12:0,36,714	0/0:11,0:8:20.82:0,21,312	0/1:9,2:11:6.98:183,0,7	0/0:3,0:3:9.03:0,9,188	0/0:9,0:9:24.08:0,24,487	0/0:6,0:6:18.05:0,18,285	0/1:6,5:12:26.80:374,0,27	0/0:4,0:3:9.02:0,9,153	0/0:4,0:4:9.02:0,9,133	0/0:8,0:7:21.06:0,21,384	0/0:4,0:4:10.28:0,10,190	0/0:7,0:7:18.06:0,18,377	0/0:7,0:7:21.07:0,21,400	0/0:4,0:4:12.04:0,12,251	0/0:6,0:6:17.85:0,18,327	1/1:3,4:6:10.85:278,11,0	0/0:5,0:5:11.54:0,12,195	0/0:1,0:1:3.01:0,3,63	0/0:11,0:11:18.06:0,18,359	0/0:7,0:6:10.42:0,10,68	0/0:2,0:2:6.02:0,6,126	0/0:7,0:7:17.80:0,18,351	0/0:2,0:2:6.02:0,6,126	0/0:9,0:9:21.54:0,22,441	0/0:2,0:2:2.47:0,2,62	0/0:2,0:2:6.02:0,6,126
chr10	59854443	.	AG	A	519.34	PASS	AB=0.905;AC=37;AF=0.740;AN=50;BaseQRankSum=-1.189;DP=96;FS=1.965;HRun=3;HaplotypeScore=46.4289;InbreedingCoeff=0.1770;MQ=55.42;MQ0=0;MQRankSum=-1.189;QD=6.33;ReadPosRankSum=3.669;VQSLOD=0.8689;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:20,4:24:27.57:92,0,28	./.	0/1:5,0:4:5.05:5,0,39	0/1:5,1:3:3.66:4,0,34	1/1:8,0:8:4.23:25,4,0	1/1:2,0:2:2.32:20,2,0	1/1:2,0:2:5.83:32,6,0	1/1:2,0:2:5.97:44,6,0	1/1:8,1:9:2.62:56,3,0	./.	1/1:0,1:1:3.01:39,3,0	1/1:3,0:2:5.91:46,6,0	1/1:1,1:2:5.91:47,6,0	1/1:2,0:2:2.88:15,3,0	1/1:2,0:2:5.80:31,6,0	1/1:3,0:3:8.78:53,9,0	1/1:0,1:1:3.01:33,3,0	0/0:6,1:6:0.53:0,1,24	1/1:1,0:1:2.97:20,3,0	1/1:1,0:1:2.99:23,3,0	0/0:3,0:3:0:0,0,0	1/1:0,3:2:0.47:1,0,0	1/1:1,0:1:2.98:22,3,0	1/1:3,1:4:5.40:32,5,0	0/0:1,0:1:1.55:0,2,4	0/0:2,0:2:3.01:0,3,37	0/0:1,0:1:2.88:0,3,15	./.
chr10	59854445	.	GA	G	1307.55	PASS	AB=0.833;AC=42;AF=0.875;AN=48;BaseQRankSum=-0.637;DP=83;FS=2.639;HRun=1;HaplotypeScore=38.1777;InbreedingCoeff=0.0374;MQ=58.64;MQ0=0;MQRankSum=-0.499;QD=16.55;ReadPosRankSum=2.466;VQSLOD=3.9650;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,6:20:30.91:238,31,0	./.	0/1:4,1:4:34.71:35,0,42	0/1:4,1:3:30.10:36,0,30	1/1:4,0:4:5.94:44,6,0	1/1:1,1:2:6.01:66,6,0	1/1:0,2:2:6.02:71,6,0	1/1:0,2:2:6.02:84,6,0	1/1:8,1:9:22.76:145,23,0	./.	1/1:1,0:1:2.99:24,3,0	1/1:0,2:2:6.02:76,6,0	1/1:1,1:2:5.85:49,6,0	1/1:0,2:2:3.01:42,3,0	1/1:0,2:2:6.02:77,6,0	1/1:0,3:3:9.03:119,9,0	1/1:1,0:1:2.88:15,3,0	1/1:6,0:5:4.41:59,4,0	1/1:0,1:1:3.01:42,3,0	1/1:0,1:1:3.01:42,3,0	0/0:0,3:3:0.47:0,0,1	1/1:3,0:2:2.84:15,3,0	1/1:0,1:1:3.01:42,3,0	1/1:2,2:4:6.02:70,6,0	1/1:1,0:1:2.99:23,3,0	0/0:1,0:1:2.97:0,3,20	./.	./.
chr10	59856645	.	GT	G	2920.13	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=3.004;DP=567;FS=1.318;HRun=7;HaplotypeScore=70.8219;InbreedingCoeff=0.9977;MQ=67.65;MQ0=0;MQRankSum=0.684;QD=23.94;ReadPosRankSum=2.660;VQSLOD=4.0745;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:90.29:0,90,1131	0/0:8,0:8:24.08:0,24,301	0/0:13,0:11:17.60:0,18,257	0/0:24,0:20:38.22:0,38,488	0/0:19,0:19:54.17:0,54,673	1/1:1,27:28:72.16:735,72,0	1/1:1,14:15:30.07:306,30,0	0/0:33,0:33:90.28:0,90,1121	0/0:23,0:23:63.19:0,63,779	0/0:28,0:28:75.24:0,75,940	0/0:15,0:15:42.08:0,42,498	1/1:0,21:21:54.12:551,54,0	1/1:0,19:19:48.11:489,48,0	0/0:17,0:17:51.16:0,51,641	0/0:19,0:19:57.18:0,57,717	0/0:18,0:18:45.14:0,45,565	0/0:27,1:28:75.24:0,75,942	0/0:20,0:20:57.18:0,57,716	0/0:23,0:23:66.20:0,66,818	0/0:22,0:22:48.15:0,48,603	0/0:21,0:21:60.18:0,60,742	1/1:3,13:16:39.08:395,39,0	1/1:0,11:11:30.07:306,30,0	1/1:0,12:12:33.08:337,33,0	0/0:19,0:19:54.17:0,54,678	0/0:27,0:27:75.23:0,75,931	0/0:18,0:18:51.16:0,51,640	0/0:18,0:18:54.16:0,54,663
chr10	59863331	.	T	TG	2602.05	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-8.608;DP=561;FS=3.982;HRun=6;HaplotypeScore=77.6217;InbreedingCoeff=0.8987;MQ=78.33;MQ0=0;MQRankSum=-0.583;QD=28.28;ReadPosRankSum=4.184;VQSLOD=4.3255;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,22:26:60.19:751,60,0	0/0:5,0:5:12.03:0,12,122	0/0:25,0:24:51.09:0,51,509	0/0:26,0:25:55.41:0,55,583	1/1:3,6:9:18.03:200,18,0	0/0:6,0:6:12.02:0,12,122	0/0:21,0:21:45.09:0,45,459	0/0:13,0:13:30.06:0,30,306	1/1:1,23:24:69.18:850,69,0	0/0:18,0:18:36.03:0,36,367	0/0:2,0:2:6.01:0,6,61	0/0:33,0:33:78.16:0,78,795	0/0:9,0:9:24.05:0,24,245	0/0:28,0:28:54.07:0,54,542	0/0:14,0:14:30.06:0,30,306	0/0:23,0:23:60.12:0,60,605	0/0:30,0:30:75.73:0,76,846	1/1:6,27:33:78.03:959,78,0	0/0:16,0:16:39.09:0,39,398	0/0:8,0:8:21.05:0,21,214	0/0:92,0:92:99:0,207,2081	0/0:7,0:7:12.03:0,12,122	0/0:7,0:7:3.01:0,3,31	0/0:22,0:22:36.06:0,36,367	0/0:13,0:13:27.03:0,27,267	0/0:25,0:25:57.11:0,57,581	0/0:14,0:14:27.05:0,27,275	0/0:12,0:12:30.06:0,30,306
chr10	59863340	.	AGTGGCCAATGCGATCGTGTGGGTGTAACAGGTGGGAGGAGCTGGGGGCTG	A	2793.69	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=0.535;DP=503;FS=2.371;HRun=0;HaplotypeScore=580.4021;InbreedingCoeff=0.8751;MQ=80.00;MQ0=0;MQRankSum=-6.147;QD=33.26;ReadPosRankSum=0.553;VQSLOD=-0.5319;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:57.09:0,57,2422	0/0:4,0:4:12.02:0,12,447	0/0:19,0:18:33.11:0,33,981	0/0:25,0:24:33.79:0,34,992	0/0:7,0:7:12.04:0,12,568	1/1:4,0:4:8.99:166,9,0	1/1:16,0:16:11.99:287,12,0	0/0:12,0:12:24.08:0,24,1079	0/0:25,0:25:75.26:0,75,3196	0/0:14,0:14:27.56:0,28,1383	0/0:3,0:3:9.02:0,9,298	1/1:25,0:25:58.27:1297,58,0	1/1:7,0:7:9.03:196,9,0	0/0:19,0:19:45.13:0,45,1809	0/0:14,0:14:36.12:0,36,1954	0/0:23,0:23:60.21:0,60,2739	0/0:30,0:30:84.20:0,84,3600	0/0:32,0:32:75.26:0,75,3528	0/0:14,0:14:21.05:0,21,822	0/0:7,0:7:12.03:0,12,418	0/0:87,0:87:99:0,180,7898	1/1:4,0:4:3.01:50,3,0	1/1:2,5:7:3.01:109,3,0	1/1:21,0:21:36.08:867,36,0	0/0:10,0:10:24.08:0,24,878	0/0:26,0:26:66.22:0,66,3099	0/0:10,0:10:19.32:0,19,1061	0/0:13,0:13:24.07:0,24,867
chr10	59863382	.	T	TG	781.57	PASS	AB=0.667;AC=11;AF=0.204;AN=54;BaseQRankSum=6.101;DP=409;FS=11.033;HRun=5;HaplotypeScore=64.1122;InbreedingCoeff=0.7750;MQ=73.35;MQ0=1;MQRankSum=-1.842;QD=16.28;ReadPosRankSum=-3.007;VQSLOD=1.7867;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:48.12:0,48,516	0/0:4,0:4:9.02:0,9,97	0/0:21,0:21:27.74:0,28,419	0/0:10,0:9:23.90:0,24,214	0/0:6,0:6:12.03:0,12,129	1/1:0,5:5:5.98:59,6,0	1/1:2,8:10:20.29:309,20,0	0/0:11,0:11:33.06:0,33,346	0/0:23,0:23:54.13:0,54,579	0/0:12,0:12:27.07:0,27,290	0/0:11,0:11:33.04:0,33,342	0/1:4,4:8:78.57:100,0,79	1/1:0,4:4:9.03:118,9,0	0/0:13,0:13:33.08:0,33,354	0/0:15,0:15:42.10:0,42,451	0/0:14,0:14:33.08:0,33,355	0/0:37,0:37:99:0,102,1096	0/0:21,0:20:54.11:0,54,569	0/0:9,0:9:21.04:0,21,219	0/0:5,0:5:15.02:0,15,153	0/0:76,1:77:99:0,208,2216	1/1:0,1:1:3.01:39,3,0	./.	1/1:0,19:20:24.08:315,24,0	0/0:7,0:7:21.05:0,21,226	0/0:26,0:26:63.15:0,63,677	0/0:11,0:11:30.04:0,30,306	0/0:7,0:7:15.03:0,15,160
chr10	59864620	.	C	CAT	1602.26	PASS	AB=0.813;AC=12;AF=0.222;AN=54;BaseQRankSum=-3.382;DP=279;FS=19.040;HRun=0;HaplotypeScore=40.9042;InbreedingCoeff=0.4906;MQ=64.52;MQ0=10;MQRankSum=0.522;QD=18.63;ReadPosRankSum=-0.950;VQSLOD=1.2779;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	1/1:3,0:2:3.01:50,3,0	0/0:13,0:7:0.06:0,0,1	0/0:14,0:3:3.01:0,3,33	1/1:7,1:7:12.93:202,13,0	0/0:17,0:17:29.99:0,30,332	0/0:2,0:2:3.01:0,3,38	1/1:8,20:27:66.01:924,66,0	0/1:2,3:5:26.12:138,0,26	0/0:12,0:12:23.66:0,24,262	0/0:5,0:5:9.03:0,9,107	0/0:1,0:1:3.01:0,3,38	0/0:6,0:5:9.02:0,9,97	0/0:5,0:5:5.99:0,6,52	0/0:9,0:9:15.01:0,15,160	0/0:8,0:8:21.01:0,21,196	1/1:4,9:13:11.10:200,11,0	1/1:13,2:14:13.96:223,14,0	0/0:16,0:15:0.54:0,1,264	0/1:14,0:13:23.07:23,0,242	0/0:9,0:8:15.05:0,15,190	0/0:4,0:4:6:0,6,61	0/0:3,0:3:2.99:0,3,24	0/0:7,0:7:12.02:0,12,137	0/0:11,0:11:24.07:0,24,293	0/0:13,0:13:9.09:0,9,267	0/0:7,0:7:14.60:0,15,134	0/0:12,0:11:20.96:0,21,209
chr10	59864638	.	T	TAC	1173.91	PASS	AB=0.837;AC=30;AF=0.600;AN=50;BaseQRankSum=-1.724;DP=304;FS=2.394;HRun=0;HaplotypeScore=55.1246;InbreedingCoeff=-0.2357;MQ=50.00;MQ0=17;MQRankSum=0.214;QD=4.46;ReadPosRankSum=-0.684;VQSLOD=2.2383;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:16:3.01:42,3,0	./.	0/0:3,0:1:0.47:0,0,1	./.	1/1:9,0:9:8.37:60,8,0	0/0:9,0:18:7.47:0,7,30	0/0:3,0:9:1.55:0,2,4	0/1:28,0:26:18.13:42,0,18	1/1:8,3:11:17.32:192,17,0	0/1:9,1:10:31.03:58,0,31	1/1:8,0:7:3.01:41,3,0	1/1:4,0:2:0.47:1,0,0	0/1:5,0:4:18.34:34,0,18	1/1:6,0:6:3.01:39,3,0	0/1:9,4:13:23.22:53,0,23	0/1:5,8:12:44.20:202,0,44	0/1:12,3:15:48.43:88,0,48	0/1:7,0:20:1.30:41,0,1	0/1:10,1:9:28.92:75,0,29	0/1:6,7:12:19.59:122,0,20	1/1:15,0:14:4.16:18,4,0	0/1:2,0:9:0:0,0,0	./.	0/1:4,0:9:0:0,0,0	0/1:8,5:15:26.59:39,0,27	0/1:8,0:8:15.46:15,0,33	1/1:6,1:7:5.84:63,6,0	0/1:7,5:10:12.58:79,0,13
chr10	59868302	.	T	TCC	4646.73	PASS	AB=0.950;AC=39;AF=0.696;AN=56;BaseQRankSum=1.918;DP=446;FS=10.040;HRun=8;HaplotypeScore=68.6994;InbreedingCoeff=0.8612;MQ=90.08;MQ0=0;MQRankSum=-2.804;QD=15.24;ReadPosRankSum=0.638;VQSLOD=1.6864;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,108,1179	0/0:5,0:5:15.04:0,15,167	0/0:20,0:20:35.80:0,36,372	0/1:18,0:19:5.10:5,0,260	0/0:8,0:8:24.06:0,24,266	1/1:3,0:19:6.99:96,7,0	1/1:6,0:33:29.17:171,29,0	0/0:15,0:15:27.04:0,27,286	0/0:16,0:16:36.08:0,36,400	1/1:6,8:14:21.07:328,21,0	1/1:2,2:4:3.01:48,3,0	1/1:2,0:20:37.43:129,37,0	1/1:3,0:14:30.20:110,30,0	1/1:6,16:22:36.12:571,36,0	1/1:5,20:26:42.83:603,43,0	1/1:1,12:14:35.61:531,36,0	0/0:17,0:17:48.13:0,48,532	0/0:16,0:16:42.11:0,42,468	1/1:4,5:9:12.04:191,12,0	1/1:2,3:5:5.98:67,6,0	1/1:7,16:23:21.54:335,22,0	1/1:4,0:16:28.77:102,29,0	1/1:1,1:9:12.66:82,13,0	1/1:1,0:12:24.95:86,25,0	1/1:3,4:9:14.53:180,15,0	1/1:5,10:17:34.45:442,34,0	1/1:4,7:11:18.06:286,18,0	1/1:2,7:9:18.06:285,18,0
chr10	59868443	.	T	TG	7401.47	PASS	AB=0.595;AC=42;AF=0.750;AN=56;BaseQRankSum=-2.954;DP=518;FS=9.403;HRun=9;HaplotypeScore=61.9710;InbreedingCoeff=0.6071;MQ=81.38;MQ0=0;MQRankSum=-2.180;QD=17.58;ReadPosRankSum=3.884;VQSLOD=4.4818;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,24:33:40.26:671,40,0	0/0:17,0:17:44.88:0,45,376	0/0:18,0:18:15.52:0,16,245	0/0:17,0:17:9.04:0,9,268	1/1:1,6:7:15.04:166,15,0	1/1:3,15:18:33.09:365,33,0	1/1:10,27:37:14.07:608,14,0	0/0:12,0:12:17.96:0,18,156	1/1:6,13:20:13.90:313,14,0	1/1:2,12:14:17.01:359,17,0	1/1:1,3:5:5.85:47,6,0	1/1:4,19:23:42.59:466,43,0	1/1:6,16:22:29.71:449,30,0	1/1:3,19:22:19.06:431,19,0	1/1:3,14:17:29.87:332,30,0	1/1:2,12:14:27.07:299,27,0	0/0:33,0:33:92.95:0,93,801	1/1:5,18:23:22.34:293,22,0	0/1:3,5:8:5.44:131,0,5	1/1:4,10:14:27.07:296,27,0	0/1:12,17:29:65.11:259,0,65	1/1:1,8:9:18.05:199,18,0	1/1:2,5:7:12.03:132,12,0	1/1:3,24:27:33.09:364,33,0	1/1:4,13:17:27.07:298,27,0	1/1:3,14:17:20.85:391,21,0	0/1:4,21:25:3.81:416,0,4	0/1:4,9:13:34.02:115,0,34
chr10	59872275	.	TTC	T	687.73	PASS	AC=22;AF=0.423;AN=52;BaseQRankSum=0.395;DP=699;FS=8.848;HRun=0;HaplotypeScore=110.2571;InbreedingCoeff=0.7714;MQ=68.05;MQ0=11;MQRankSum=-1.016;QD=2.73;ReadPosRankSum=1.511;VQSLOD=1.7479;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:31:20.91:0,21,225	0/0:11,0:11:11.99:0,12,101	./.	./.	0/0:18,0:27:23.98:0,24,285	0/0:23,0:31:22.80:0,23,196	0/0:35,0:33:24.39:0,24,178	0/0:39,0:38:5.85:0,6,36	0/0:15,0:15:15:0,15,161	0/0:36,0:34:2.72:0,3,20	1/1:15,1:16:6.01:63,6,0	0/0:27,0:25:11.56:0,12,81	0/0:31,0:31:23.91:0,24,200	1/1:21,2:24:8.05:71,8,0	1/1:15,3:18:17.05:138,17,0	1/1:19,0:32:28.41:140,28,0	0/0:17,0:28:15.49:0,15,165	0/0:17,0:17:12.38:0,12,86	1/1:17,3:20:9.02:97,9,0	1/1:11,2:12:3.01:33,3,0	1/1:33,6:38:5.90:48,6,0	0/0:23,0:23:8.96:0,9,69	0/0:8,0:8:2.99:0,3,24	0/0:27,0:26:17.89:0,18,145	1/1:18,9:27:6.02:65,6,0	1/1:18,0:22:25.01:105,25,0	1/1:21,4:26:11.86:110,12,0	1/1:14,0:14:2.04:6,2,0
chr10	59872891	.	TCTC	T	14584.66	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=11.538;DP=818;FS=1.169;HRun=0;HaplotypeScore=130.3151;InbreedingCoeff=0.9998;MQ=71.84;MQ0=0;MQRankSum=-4.524;QD=42.03;ReadPosRankSum=3.206;VQSLOD=6.4399;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:57:99:0,157,3369	0/0:19,0:19:57.18:0,57,1251	0/0:15,0:15:33.05:0,33,565	0/0:15,0:15:36.03:0,36,660	0/0:26,0:26:78.25:0,78,1634	0/0:25,0:25:75.26:0,75,1708	0/0:37,0:37:99:0,108,2444	0/0:23,0:23:56.93:0,57,1202	0/0:26,0:26:75.25:0,75,1686	1/1:1,25:26:75.23:1213,75,0	1/1:1,10:11:27.05:429,27,0	0/0:46,0:46:99:0,129,2856	0/0:26,0:26:78.27:0,78,1775	1/1:0,33:33:84.29:1411,84,0	1/1:0,34:33:87.30:1482,87,0	1/1:0,35:33:93.32:1570,93,0	0/0:46,0:46:99:0,132,3039	0/0:27,0:27:78.27:0,78,1798	1/1:0,17:16:45.06:645,45,0	1/1:1,14:15:39.13:636,39,0	1/1:2,43:45:99:1737,102,0	0/0:26,0:26:78.27:0,78,1798	0/0:19,0:19:57.16:0,57,1163	0/0:38,0:38:99:0,105,2420	1/1:0,35:35:84.24:1386,84,0	1/1:2,51:52:99:2196,141,0	1/1:0,24:24:66.14:1062,66,0	1/1:3,16:19:48.16:818,48,0
chr10	59872973	.	ATG	A	1949.04	PASS	AB=0.947;AC=29;AF=0.537;AN=54;BaseQRankSum=-3.093;DP=779;FS=17.710;HRun=0;HaplotypeScore=177.3075;InbreedingCoeff=-0.0831;MQ=59.13;MQ0=9;MQRankSum=2.831;QD=3.34;ReadPosRankSum=3.176;VQSLOD=1.7020;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:37,2:38:39.69:215,0,40	1/1:10,0:10:4.98:23,5,0	0/0:37,0:25:5.90:0,6,38	0/0:35,0:22:2.98:0,3,21	1/1:18,4:21:3:34,3,0	0/1:13,6:19:5.91:137,0,6	0/1:28,3:31:22.50:187,0,22	0/0:25,0:24:11.47:0,11,67	0/1:22,4:26:8.06:142,0,8	0/1:41,1:42:68.04:93,0,68	./.	1/1:31,10:42:27.92:253,28,0	1/1:26,9:35:21.59:375,22,0	0/1:49,0:48:63.04:63,0,78	0/0:25,0:25:5.47:0,5,89	0/1:28,0:27:5.09:5,0,41	0/1:36,0:35:14.96:39,0,15	0/1:23,1:22:97.32:109,0,97	1/1:15,0:15:3.88:35,4,0	0/0:9,0:8:0.20:0,0,1	0/0:55,0:52:12.36:0,12,124	1/1:10,7:16:3.48:34,3,0	1/1:14,3:17:8.84:87,9,0	1/1:28,3:31:4.49:154,4,0	0/1:19,0:18:15.14:15,0,27	0/1:46,0:45:46.48:46,0,60	0/1:24,0:24:0.75:50,0,1	0/1:9,0:10:6.08:6,0,31
chr10	59873003	.	G	GTC	6302.90	PASS	AB=0.944;AC=33;AF=0.589;AN=56;BaseQRankSum=-0.805;DP=777;FS=4.681;HRun=0;HaplotypeScore=209.3768;InbreedingCoeff=0.0774;MQ=45.25;MQ0=26;MQRankSum=2.630;QD=9.62;ReadPosRankSum=3.791;VQSLOD=4.4673;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:39,2:42:16.32:411,16,0	0/0:9,0:8:11.88:0,12,94	0/0:7,0:4:8.97:0,9,89	0/0:14,0:5:8.89:0,9,77	0/1:24,1:25:4.68:5,0,36	0/1:23,0:23:30.55:39,0,31	0/1:32,1:33:53.87:89,0,54	0/0:27,0:24:40.84:0,41,271	1/1:24,0:26:4.05:241,4,0	1/1:31,10:39:11.83:842,12,0	1/1:12,2:13:2.60:10,3,0	0/1:45,0:45:13.47:81,0,13	0/1:35,2:34:53.56:133,0,54	1/1:34,11:43:48.41:832,48,0	0/1:25,6:31:15.57:339,0,16	1/1:25,6:32:15.37:408,15,0	0/0:40,0:39:13.07:0,13,123	1/1:27,3:28:23.87:423,24,0	0/1:21,0:20:5.85:250,0,6	1/1:8,0:7:2.99:58,3,0	0/1:54,6:52:16.33:393,0,16	0/0:25,0:22:5.03:0,5,124	0/1:14,0:13:16.88:72,0,17	1/1:33,1:37:0.06:207,0,0	1/1:14,3:16:11.37:268,11,0	1/1:37,6:40:7.42:760,7,0	0/1:19,3:23:9.29:404,0,9	0/1:3,0:3:22.21:37,0,22
chr10	59873005	.	GTGTC	G	2946.56	PASS	AB=0.985;AC=42;AF=0.750;AN=56;BaseQRankSum=-1.682;DP=783;FS=7.200;HRun=0;HaplotypeScore=231.0018;InbreedingCoeff=-0.2525;MQ=45.24;MQ0=27;MQRankSum=1.786;QD=3.84;ReadPosRankSum=-2.560;VQSLOD=1.0326;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:43,0:42:48.15:251,0,48	1/1:9,0:8:11.59:86,12,0	1/1:8,0:4:2.04:6,2,0	0/0:16,0:3:2.99:0,3,25	1/1:27,0:26:5.42:25,5,0	1/1:23,0:23:10.21:44,10,0	0/1:39,0:37:27.98:28,0,48	0/1:28,0:25:50.09:197,0,50	1/1:26,0:26:11.08:211,11,0	0/1:40,1:39:27.05:278,0,27	1/1:13,1:13:5.95:42,6,0	1/1:43,0:43:23.94:139,24,0	1/1:37,0:34:22.48:175,22,0	0/1:45,0:43:74.57:75,0,82	0/1:28,1:28:45.87:103,0,46	1/1:30,2:32:7.32:165,7,0	1/1:39,0:39:9.42:53,9,0	0/1:30,0:28:73.34:235,0,73	0/1:21,1:20:48.80:49,0,108	1/1:8,0:7:5.48:32,5,0	0/1:57,1:50:63.16:176,0,63	1/1:25,0:22:16.60:64,17,0	1/1:14,0:13:2.04:14,2,0	1/1:40,0:40:13.09:78,13,0	0/1:17,0:16:35.54:39,0,36	0/1:38,3:38:24.11:315,0,24	1/1:23,0:23:13.34:187,13,0	0/1:5,0:5:31.40:31,0,89
chr10	59873007	.	GTC	G	4163.95	PASS	AB=0.974;AC=46;AF=0.821;AN=56;BaseQRankSum=-0.216;DP=783;FS=0.527;HRun=0;HaplotypeScore=211.8812;InbreedingCoeff=-0.0524;MQ=45.34;MQ0=27;MQRankSum=3.403;QD=5.42;ReadPosRankSum=-0.769;VQSLOD=3.0841;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:38,5:42:20.67:284,21,0	1/1:9,0:8:12.01:122,12,0	1/1:7,0:3:2.04:6,2,0	0/0:15,0:2:2.99:0,3,25	1/1:25,0:24:5.42:25,5,0	1/1:22,0:22:10.99:45,11,0	0/1:40,0:38:19.17:47,0,19	0/1:31,0:27:36.02:197,0,36	1/1:24,4:28:43.45:312,43,0	1/1:39,1:38:17.72:442,18,0	1/1:15,0:13:5.95:42,6,0	1/1:40,0:40:24.39:131,24,0	1/1:36,1:34:38.22:183,38,0	0/1:40,5:43:8.51:236,0,9	0/1:30,1:30:32.87:129,0,33	1/1:32,0:32:10.75:220,11,0	1/1:5,35:39:8.72:128,9,0	1/1:27,3:28:17.26:276,17,0	0/1:22,0:20:87.47:87,0,92	1/1:8,1:8:5.48:32,5,0	0/1:58,1:51:42.38:207,0,42	1/1:24,0:21:17.71:83,18,0	1/1:14,0:13:7.85:40,8,0	1/1:39,1:40:24.77:102,25,0	0/1:15,1:15:29.66:30,0,35	1/1:41,1:39:29.49:503,29,0	1/1:20,2:22:12.25:247,12,0	0/1:5,0:5:7.91:8,0,66
chr10	59873009	.	C	CTG	4953.95	PASS	AB=0.950;AC=38;AF=0.704;AN=54;BaseQRankSum=-2.105;DP=789;FS=2.913;HRun=0;HaplotypeScore=214.6284;InbreedingCoeff=0.2090;MQ=44.95;MQ0=27;MQRankSum=-0.984;QD=7.59;ReadPosRankSum=-1.337;VQSLOD=4.4839;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:36,5:40:15.38:645,15,0	0/0:8,0:7:1.75:0,2,8	./.	0/0:15,0:1:3.01:0,3,36	1/1:10,15:24:3.01:35,3,0	1/1:21,0:21:3.70:17,4,0	0/0:39,0:37:2.37:0,2,16	1/1:29,0:25:10.20:60,10,0	1/1:23,2:25:37.62:452,38,0	1/1:36,3:37:61.86:718,62,0	1/1:14,1:13:6.02:91,6,0	1/1:42,0:42:8.72:51,9,0	1/1:38,0:36:2.95:31,3,0	0/1:38,5:41:14.93:143,0,15	1/1:30,2:32:13.53:165,14,0	1/1:26,5:32:26.34:324,26,0	0/0:40,0:39:7.87:0,8,31	1/1:27,2:27:53.92:641,54,0	0/1:25,0:23:55.03:190,0,55	1/1:8,2:9:2.99:32,3,0	1/1:61,1:54:28.52:295,29,0	0/0:25,0:22:6.99:0,7,41	1/1:14,0:13:2.84:15,3,0	0/1:41,1:42:4.10:10,0,4	0/1:15,1:16:19.27:19,0,30	1/1:41,2:40:66.24:766,66,0	0/1:20,3:23:9.47:217,0,9	0/1:5,0:5:31.93:36,0,32
chr10	59873013	.	G	GTC	4436.50	PASS	AB=0.985;AC=37;AF=0.685;AN=54;BaseQRankSum=3.655;DP=804;FS=0.490;HRun=0;HaplotypeScore=214.6983;InbreedingCoeff=-0.1680;MQ=45.95;MQ0=30;MQRankSum=3.280;QD=5.92;ReadPosRankSum=2.402;VQSLOD=3.9217;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:42,0:41:17.13:388,17,0	0/1:8,0:7:21.84:22,0,27	./.	0/0:22,0:3:4.83:0,5,51	1/1:25,0:24:5.93:41,6,0	1/1:23,0:22:14.80:119,15,0	0/1:39,0:37:23.56:79,0,24	0/0:24,0:20:33.74:0,34,241	1/1:25,0:25:2.81:181,3,0	1/1:39,1:38:45.07:706,45,0	0/1:15,1:14:11.03:33,0,11	1/1:46,0:46:16.28:172,16,0	1/1:38,0:35:24.72:216,25,0	0/1:44,0:42:43.43:265,0,43	1/1:32,0:30:17.39:159,17,0	1/1:32,0:32:30.44:239,30,0	1/1:39,0:38:7.50:34,8,0	0/1:31,0:29:40.38:264,0,40	0/1:22,2:22:99:161,0,181	0/1:10,0:9:7.34:25,0,7	0/1:62,0:54:7.66:196,0,8	1/1:25,0:22:2.95:80,3,0	0/1:14,0:13:14.48:30,0,14	1/1:45,0:45:18.35:123,18,0	0/1:17,0:17:27.45:77,0,27	0/1:43,3:43:4.73:582,0,5	0/1:22,0:22:20.20:191,0,20	0/1:5,0:5:31.10:53,0,31
chr10	59873019	.	GTGTGTGTC	G	844.81	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=-2.504;DP=824;FS=16.055;HRun=0;HaplotypeScore=263.4424;InbreedingCoeff=0.1975;MQ=47.91;MQ0=30;MQRankSum=-0.894;QD=1.76;ReadPosRankSum=-1.123;VQSLOD=0.6347;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:42,0:41:7.69:8,0,887	0/1:7,0:6:11.62:57,0,12	0/0:18,0:4:0.99:0,1,31	0/0:30,0:8:10.58:0,11,207	0/1:26,0:25:8.01:8,0,122	1/1:25,0:24:3.86:17,4,0	0/0:39,0:37:1.96:0,2,34	1/1:9,13:18:28.59:389,29,0	0/0:31,0:31:7.77:0,8,573	0/1:40,0:38:21.78:22,0,375	0/0:15,0:13:8.99:0,9,86	1/1:46,0:46:11.63:87,12,0	1/1:38,0:35:14:74,14,0	0/0:44,0:42:6.21:0,6,360	0/1:34,0:32:23.90:24,0,147	0/0:35,0:35:33.18:0,33,235	0/1:40,0:39:7.46:105,0,7	0/0:31,0:29:25.90:0,26,790	0/0:24,0:22:46.72:0,47,508	0/0:9,0:8:2.70:0,3,21	0/0:62,0:54:22.03:0,22,230	1/1:23,0:20:15.30:113,15,0	1/1:15,0:14:2.69:14,3,0	1/1:41,0:41:5.49:39,5,0	0/1:17,0:17:11.15:11,0,87	0/1:46,0:43:5.12:5,0,620	0/1:19,0:19:47.38:47,0,90	0/0:5,0:5:14.04:0,14,207
chr10	59873023	.	GTGTC	G	2108.30	PASS	AB=0.926;AC=31;AF=0.554;AN=56;BaseQRankSum=-1.702;DP=825;FS=30.983;HRun=0;HaplotypeScore=226.7423;InbreedingCoeff=-0.0293;MQ=49.75;MQ0=30;MQRankSum=-2.621;QD=3.29;ReadPosRankSum=-2.633;VQSLOD=1.1388;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,1:37:14.19:0,14,610	1/1:7,0:7:14.57:109,15,0	0/1:25,0:8:19.05:19,0,61	0/0:35,0:9:13.94:0,14,184	0/1:22,4:25:8.05:8,0,75	1/1:4,20:23:8.49:68,8,0	0/1:11,30:39:16.97:28,0,17	1/1:23,0:20:27.55:193,28,0	0/0:28,3:31:4.83:0,5,421	0/1:34,4:36:99:272,0,252	0/0:14,1:13:9:0,9,91	1/1:6,40:46:11.34:142,11,0	1/1:7,31:35:17.87:231,18,0	0/1:43,4:45:99:162,0,259	0/1:32,1:31:67.55:68,0,113	0/1:35,1:36:54.38:54,0,187	1/1:37,0:36:15.91:106,16,0	0/1:29,1:28:49.16:49,0,542	0/1:25,0:23:34.69:35,0,370	0/0:8,0:8:5.47:0,5,43	0/0:58,1:52:24.39:0,24,246	1/1:12,9:18:17.11:284,17,0	1/1:3,11:13:2.68:14,3,0	1/1:6,37:43:5.98:76,6,0	0/1:16,0:16:35.77:36,0,83	0/1:43,2:42:99:204,0,449	0/1:17,2:19:99:115,0,121	0/1:6,0:6:14.16:14,0,96
chr10	59873039	.	C	CTG	6399.43	PASS	AB=0.564;AC=22;AF=0.393;AN=56;BaseQRankSum=-3.632;DP=872;FS=7.274;HRun=0;HaplotypeScore=195.3811;InbreedingCoeff=0.7987;MQ=54.24;MQ0=25;MQRankSum=0.270;QD=18.66;ReadPosRankSum=2.451;VQSLOD=4.0795;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:41:75.15:0,75,933	0/0:10,0:10:15:0,15,148	0/0:50,0:26:56.30:0,56,592	0/0:55,0:24:44.03:0,44,567	0/0:28,0:27:20.65:0,21,234	0/0:20,0:19:2.36:0,2,9	0/0:35,0:33:11.77:0,12,126	0/0:30,0:28:62.92:0,63,739	0/0:33,0:33:75.24:0,75,945	1/1:15,16:29:51.10:792,51,0	1/1:14,4:16:24.04:338,24,0	0/0:52,0:52:32.88:0,33,359	0/0:31,0:29:20.94:0,21,256	1/1:25,17:41:45.03:710,45,0	1/1:6,28:33:21.04:352,21,0	0/1:5,26:31:5.12:468,0,5	0/0:38,0:37:33.07:0,33,378	0/0:28,0:27:38.34:0,38,683	1/1:13,13:25:22.33:562,22,0	0/1:4,10:14:25.72:138,0,26	1/1:37,19:51:52.94:790,53,0	0/0:25,0:22:29.91:0,30,352	0/0:11,0:11:2.70:0,3,38	0/0:42,0:42:18.04:0,18,213	1/1:4,15:19:12.04:201,12,0	1/1:17,27:42:82.77:1217,83,0	1/1:13,9:22:42.13:675,42,0	1/1:3,3:6:10.85:156,11,0
chr10	59875972	.	CTG	C	394.51	PASS	AB=0.745;AC=3;AF=0.054;AN=56;BaseQRankSum=5.782;DP=1066;FS=0.703;HRun=0;HaplotypeScore=253.8964;InbreedingCoeff=-0.0571;MQ=64.11;MQ0=11;MQRankSum=-6.191;QD=4.38;ReadPosRankSum=-5.822;VQSLOD=1.6167;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:69,0:69:99:0,133,2078	0/1:4,7:11:29.78:30,0,152	0/0:70,1:33:74.10:0,74,1154	0/0:107,2:65:16.82:0,17,1569	0/0:26,0:26:40.87:0,41,807	0/0:37,0:37:78.26:0,78,1397	0/0:37,0:37:51.16:0,51,874	0/1:32,15:46:99:375,0,1114	0/0:32,0:32:44.16:0,44,696	0/0:41,0:41:99:0,114,1933	0/0:23,0:23:63.22:0,63,1115	0/0:37,0:37:75.26:0,75,1351	0/0:34,0:34:63.93:0,64,1145	0/0:28,0:28:66.21:0,66,1174	0/0:41,0:41:84.25:0,84,1507	0/0:46,0:46:99:0,123,2140	0/1:27,5:32:89.81:90,0,839	0/0:25,0:25:68.20:0,68,1064	0/0:17,0:17:48.11:0,48,785	0/0:35,0:35:90.27:0,90,1553	0/0:68,0:68:99:0,174,2924	0/0:30,0:29:39.05:0,39,634	0/0:12,0:12:23.92:0,24,417	0/0:36,0:36:71.27:0,71,1249	0/0:29,0:29:69.24:0,69,1254	0/0:41,0:41:99:0,123,2142	0/0:33,0:33:90.29:0,90,1567	0/0:17,0:17:48.16:0,48,878
chr10	59875974	.	G	GTGTC	7353.09	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=-0.355;DP=1077;FS=2.551;HRun=0;HaplotypeScore=266.6578;InbreedingCoeff=0.0779;MQ=64.08;MQ0=12;MQRankSum=1.369;QD=15.48;ReadPosRankSum=0.013;VQSLOD=4.2337;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:72,0:72:99:920,0,118	1/1:12,0:12:18.05:291,18,0	0/0:75,0:34:53.56:0,54,566	0/0:110,0:65:28.06:0,28,859	0/1:25,0:25:41.78:456,0,42	0/1:38,0:38:54.37:550,0,54	0/1:36,0:36:22.65:203,0,23	1/1:33,21:53:99:1410,118,0	0/1:31,0:31:32.78:427,0,33	0/0:41,0:41:95.27:0,95,1386	0/0:22,0:22:60.06:0,60,826	0/1:38,0:38:69.50:575,0,69	0/1:34,0:34:80.82:427,0,81	0/0:29,0:29:57.11:0,57,799	0/0:39,0:40:78.23:0,78,1232	0/0:44,0:44:99:0,111,1708	1/1:32,0:32:62.93:864,63,0	0/1:25,0:25:62.06:486,0,62	0/0:18,0:17:41.96:0,42,544	0/0:34,0:34:84.17:0,84,1251	0/0:68,0:68:99:0,151,2278	0/1:29,0:28:25.84:195,0,26	0/1:11,0:11:11.36:130,0,11	0/1:38,0:38:99:420,0,131	0/0:28,0:28:69.16:0,69,1020	0/0:43,0:43:99:0,114,1659	0/0:33,0:33:72.09:0,72,1087	0/0:16,0:16:45.04:0,45,623
chr10	59875984	.	G	GTCTC	10934.22	PASS	AB=1.000;AC=27;AF=0.482;AN=56;BaseQRankSum=-9.734;DP=1110;FS=4.634;HRun=0;HaplotypeScore=261.1215;InbreedingCoeff=0.9327;MQ=61.18;MQ0=16;MQRankSum=-0.597;QD=22.22;ReadPosRankSum=2.440;VQSLOD=4.2620;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,52:72:65.77:1523,66,0	1/1:13,0:13:17.88:220,18,0	0/0:75,0:30:31.94:0,32,321	0/0:116,0:62:40.65:0,41,675	1/1:7,19:26:30.10:723,30,0	1/1:36,0:36:56.90:1078,57,0	1/1:36,0:37:28.90:447,29,0	1/1:59,0:58:99:1281,122,0	1/1:6,26:33:27.09:670,27,0	0/0:41,0:41:96.11:0,96,1377	0/0:22,0:22:42.13:0,42,685	1/1:39,0:40:47.28:1060,47,0	1/1:32,0:32:42.13:800,42,0	0/0:28,0:28:48.08:0,48,734	0/0:43,0:43:84.18:0,84,1229	0/0:47,0:47:99:0,111,1684	1/1:32,0:32:53.73:697,54,0	1/1:23,9:33:60.41:1026,60,0	0/0:20,0:18:37.59:0,38,511	0/0:33,0:33:84.22:0,84,1270	0/0:71,0:71:99:0,165,2410	1/1:28,0:27:17.90:361,18,0	1/1:11,0:11:14.96:269,15,0	0/1:40,0:40:8.33:779,0,8	0/0:29,0:29:60.14:0,60,902	0/0:43,0:43:99:0,102,1584	0/0:32,0:32:75.11:0,75,1128	0/0:17,0:17:33.09:0,33,521
chr10	59875986	.	C	CTG	1480.88	PASS	AB=0.990;AC=15;AF=0.268;AN=56;BaseQRankSum=12.981;DP=1111;FS=6.543;HRun=0;HaplotypeScore=261.2936;InbreedingCoeff=-0.1371;MQ=61.16;MQ0=16;MQRankSum=5.095;QD=2.99;ReadPosRankSum=9.833;VQSLOD=0.3832;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:73,0:73:34.46:34,0,155	0/1:11,2:13:4.75:168,0,5	0/0:74,0:29:66.92:0,67,710	0/0:118,0:62:82.05:0,82,1114	0/1:25,0:25:4.39:4,0,71	0/1:36,0:36:66.75:80,0,67	0/1:37,0:37:21.63:77,0,22	0/1:56,0:55:99:528,0,511	0/1:35,0:35:6.52:7,0,68	0/0:42,0:42:99:0,116,1394	0/0:22,0:22:63.06:0,63,790	0/1:40,0:40:62.74:107,0,63	0/1:34,0:34:60.93:61,0,127	0/0:26,0:26:63.13:0,63,803	0/0:43,0:43:93.20:0,93,1202	0/0:46,0:46:99:0,126,1663	1/1:25,7:32:11.18:440,11,0	0/1:33,0:33:21.44:21,0,275	0/0:21,0:19:50.48:0,50,573	0/0:33,0:33:96.20:0,96,1282	0/0:68,0:68:99:0,174,2268	0/1:28,0:27:29.08:33,0,29	0/1:11,0:11:16.65:17,0,34	0/1:42,0:42:62.48:62,0,115	0/0:29,0:29:75.13:0,75,945	0/0:44,0:44:99:0,126,1639	0/0:32,0:32:93.07:0,93,1184	0/0:17,0:17:48.02:0,48,580
chr10	59875998	.	C	CTCTG	13164.42	PASS	AB=1.000;AC=34;AF=0.607;AN=56;BaseQRankSum=-12.126;DP=1141;FS=1.945;HRun=0;HaplotypeScore=252.2698;InbreedingCoeff=-0.0605;MQ=59.97;MQ0=19;MQRankSum=4.689;QD=15.13;ReadPosRankSum=-0.508;VQSLOD=4.0660;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:77,0:77:99:929,0,228	1/1:14,1:16:28.97:309,29,0	0/0:66,0:25:48.55:0,49,455	0/0:101,0:49:41.49:0,41,833	0/1:31,0:31:99:435,0,119	1/1:3,34:38:56.90:1512,57,0	1/1:3,36:42:25.48:607,25,0	1/1:58,0:57:99:2084,154,0	0/1:34,0:34:95.02:416,0,95	0/1:44,0:44:99:104,0,535	0/1:19,0:19:44.90:45,0,315	1/1:0,37:42:57.03:1518,57,0	1/1:0,30:34:44.85:1112,45,0	0/1:29,0:29:99:105,0,317	0/1:42,0:42:15.98:16,0,543	0/1:47,0:47:14:14,0,760	1/1:23,0:32:64.99:890,65,0	0/1:34,0:34:34.58:534,0,35	0/1:23,0:19:35.67:36,0,178	0/0:33,0:33:5.83:0,6,538	0/0:71,0:71:20.39:0,20,1057	1/1:0,27:30:18.06:501,18,0	1/1:1,12:15:14.91:387,15,0	1/1:3,45:53:23.26:1160,23,0	0/1:34,0:34:99:143,0,382	0/1:48,0:48:99:205,0,658	0/1:34,0:34:92.95:93,0,471	0/1:13,0:13:12.49:12,0,249
chr10	59876127	.	T	TTGTGTCTATCTCTG	15318.62	PASS	AB=0.561;AC=25;AF=0.446;AN=56;BaseQRankSum=-2.734;DP=975;FS=0.778;HRun=0;HaplotypeScore=322.9476;InbreedingCoeff=0.7753;MQ=56.59;MQ0=1;MQRankSum=-5.332;QD=34.58;ReadPosRankSum=-1.535;VQSLOD=3.0959;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:35,0:35:16.73:309,17,0	1/1:9,0:9:6.67:273,7,0	0/0:38,0:29:54.68:0,55,633	0/0:45,0:34:21.86:0,22,408	0/1:8,22:37:0.19:0,0,0	0/0:31,0:31:79.03:0,79,2270	0/0:37,0:37:56.60:0,57,1560	1/1:62,0:62:99:2438,114,0	0/0:9,25:39:0.88:0,1,2	1/1:44,0:44:99:4043,114,0	0/0:4,10:17:0.84:0,1,2	0/0:37,0:37:78:0,78,2246	0/0:34,0:34:66.08:0,66,1806	0/0:9,21:33:0.89:0,1,2	0/0:13,35:48:0.89:0,1,2	1/1:11,21:36:3.01:92,3,0	1/1:31,0:31:16.88:323,17,0	1/1:22,0:22:15.75:1236,16,0	1/1:24,0:23:42.14:1511,42,0	0/0:10,20:30:1.77:0,2,4	1/1:48,0:46:10.69:218,11,0	0/0:27,0:27:51.13:0,51,1353	0/0:18,0:18:45.12:0,45,1362	0/0:65,0:65:99:0,138,4265	0/0:11,18:32:0.89:0,1,2	1/1:7,35:49:99:4110,120,0	1/1:10,20:36:9.03:431,9,0	1/1:9,0:9:18.02:334,18,0
chr10	59876147	.	CTG	C	2267.05	PASS	AB=0.834;AC=9;AF=0.161;AN=56;BaseQRankSum=10.768;DP=980;FS=0.850;HRun=0;HaplotypeScore=216.4886;InbreedingCoeff=-0.1962;MQ=56.49;MQ0=7;MQRankSum=-5.875;QD=7.24;ReadPosRankSum=2.197;VQSLOD=3.0346;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:24,5:29:76.73:77,0,297	0/1:6,3:9:27.90:28,0,102	0/0:54,0:39:99:0,112,1696	0/0:73,0:35:50.35:0,50,846	0/0:35,0:35:20.91:0,21,363	0/0:35,0:35:93.28:0,93,1696	0/0:38,0:38:69.69:0,70,1615	0/1:47,11:57:99:619,0,1019	0/0:33,0:33:21.07:0,21,376	0/1:31,20:51:99:647,0,877	0/0:18,0:18:11.97:0,12,221	0/0:38,0:38:99:0,105,1928	0/0:33,0:33:90.21:0,90,1516	0/0:32,0:32:21.07:0,21,384	0/0:43,0:43:27.03:0,27,489	0/0:35,0:35:33.11:0,33,617	0/1:31,6:37:99:136,0,515	0/1:19,2:21:99:120,0,613	0/1:17,6:21:99:350,0,310	0/0:18,0:18:6.01:0,6,83	0/1:27,11:36:0.15:0,0,315	0/0:28,0:28:78.21:0,78,1354	0/0:17,0:17:51.13:0,51,851	0/0:62,0:62:99:0,163,2931	0/0:25,0:25:17.70:0,18,290	0/1:47,0:47:99:424,0,1328	0/0:40,0:39:5.51:0,6,667	0/0:9,1:10:7.29:0,7,319
chr10	59876159	.	GTGTC	G	1926.04	PASS	AB=0.948;AC=8;AF=0.143;AN=56;BaseQRankSum=12.222;DP=976;FS=3.225;HRun=0;HaplotypeScore=239.6681;InbreedingCoeff=0.3531;MQ=54.70;MQ0=11;MQRankSum=-7.315;QD=8.45;ReadPosRankSum=-1.483;VQSLOD=2.8763;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,1:32:2.66:0,3,531	1/1:8,2:11:7.99:97,8,0	0/0:50,0:29:21.68:0,22,837	0/0:77,1:32:19.52:0,20,814	0/0:33,0:33:32.93:0,33,818	0/0:36,0:36:96.26:0,96,2234	0/0:37,0:37:83.24:0,83,1788	0/1:56,0:55:10.50:745,0,10	0/0:33,0:33:30.10:0,30,752	0/1:35,9:44:99:504,0,1483	0/0:19,0:19:17.55:0,18,454	0/0:40,0:40:92.32:0,92,2065	0/0:35,0:35:93.23:0,93,2100	0/0:33,0:33:33.10:0,33,777	0/0:35,0:35:35.62:0,36,856	0/0:35,0:35:48.13:0,48,1115	1/1:41,1:42:26.87:399,27,0	0/0:20,0:20:50.30:0,50,1044	0/1:25,1:22:99:99,0,628	0/0:19,0:19:18.05:0,18,382	0/0:43,2:43:36.60:0,37,927	0/0:25,0:25:66.23:0,66,1646	0/0:14,0:14:36.11:0,36,767	0/0:59,0:59:99:0,147,3296	0/0:23,0:23:20.65:0,21,505	0/1:49,0:49:99:222,0,2188	0/0:36,0:35:18.72:0,19,1200	0/0:11,0:11:5.50:0,5,544
chr10	59876169	.	GTCTC	G	2250.05	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=10.903;DP=974;FS=4.884;HRun=0;HaplotypeScore=232.6073;InbreedingCoeff=0.5896;MQ=54.59;MQ0=13;MQRankSum=-4.713;QD=10.47;ReadPosRankSum=-2.344;VQSLOD=2.4646;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:32.45:0,32,694	1/1:4,6:10:11.40:144,11,0	0/0:49,0:30:52.02:0,52,994	0/0:80,0:33:23.44:0,23,819	0/0:35,0:35:41.92:0,42,942	0/0:39,0:39:99:0,105,2223	0/0:35,0:35:75.05:0,75,1811	1/1:7,36:42:73.26:1408,73,0	0/0:34,0:34:45.09:0,45,938	0/1:50,0:50:99:154,0,1833	0/0:18,0:18:20.56:0,21,524	0/0:36,0:36:87.24:0,87,2041	0/0:35,0:35:93.25:0,93,2120	0/0:33,0:33:42.12:0,42,939	0/0:37,0:37:50.68:0,51,1137	0/0:37,0:37:57.17:0,57,1294	1/1:8,30:39:19.57:652,20,0	0/0:20,0:20:49.36:0,49,1127	0/1:22,0:16:30.66:31,0,619	0/0:22,0:22:33.02:0,33,563	0/0:45,0:43:48.18:0,48,1072	0/0:26,0:26:75.21:0,75,1769	0/0:12,0:12:36.06:0,36,693	0/0:60,0:60:99:0,144,3201	0/0:24,0:24:26.44:0,26,596	0/1:51,0:51:16.60:17,0,2454	0/0:34,0:33:36.60:0,37,1295	0/0:12,0:12:23.54:0,24,619
chr10	59876260	.	CTA	C	1684.19	PASS	AB=0.974;AC=10;AF=0.179;AN=56;BaseQRankSum=13.303;DP=934;FS=3.332;HRun=0;HaplotypeScore=176.9352;InbreedingCoeff=0.2767;MQ=66.47;MQ0=9;MQRankSum=-0.346;QD=5.85;ReadPosRankSum=3.901;VQSLOD=3.3455;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:92.84:0,93,1595	0/0:6,0:6:15.05:0,15,283	0/0:67,0:38:60.57:0,61,1001	0/0:86,0:50:85.99:0,86,1294	0/0:22,0:22:26.27:0,26,769	0/1:26,0:26:9.23:222,0,9	0/1:35,0:35:69.86:167,0,70	0/0:37,0:37:92.96:0,93,1363	0/0:27,0:26:66.09:0,66,1137	0/0:31,0:31:63.42:0,63,1282	0/0:15,0:15:26.12:0,26,515	0/1:34,3:37:17.95:310,0,18	1/1:29,0:29:24.04:294,24,0	0/0:38,0:38:21:0,21,486	0/0:41,0:41:48.12:0,48,795	0/0:29,0:28:54.05:0,54,822	0/0:27,0:27:60.20:0,60,1078	0/0:23,0:23:13.22:0,13,421	0/0:31,0:30:20.16:0,20,1069	0/0:26,0:26:32.24:0,32,1132	0/1:53,0:53:15.21:15,0,1067	0/1:29,2:31:92.21:195,0,92	1/1:32,0:32:14.34:274,14,0	0/1:44,1:45:56.10:362,0,56	0/0:23,0:23:12.98:0,13,499	0/0:38,0:37:62.16:0,62,1442	0/0:25,0:25:51.26:0,51,786	0/0:18,0:18:51.12:0,51,823
chr10	59876262	.	ATC	A	4855.67	PASS	AB=0.951;AC=16;AF=0.286;AN=56;BaseQRankSum=6.578;DP=935;FS=0.736;HRun=0;HaplotypeScore=171.0485;InbreedingCoeff=0.8718;MQ=66.11;MQ0=11;MQRankSum=0.717;QD=17.79;ReadPosRankSum=4.322;VQSLOD=4.8466;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:83.89:0,84,1357	0/0:6,0:6:15.05:0,15,249	0/0:69,1:37:58.09:0,58,766	0/0:87,0:50:65.56:0,66,1092	0/0:24,0:24:57.52:0,58,811	1/1:5,22:27:51.95:677,52,0	1/1:5,27:33:41.52:607,42,0	0/0:37,0:37:32.01:0,32,936	0/0:27,0:26:60.12:0,60,904	0/0:31,0:31:79.70:0,80,1171	0/1:14,1:15:4.56:5,0,416	1/1:10,28:38:62.89:763,63,0	1/1:3,25:28:59.78:724,60,0	0/0:37,0:37:19.31:0,19,290	0/0:38,0:38:39.13:0,39,624	0/0:28,0:27:39.12:0,39,605	0/0:28,0:28:60.16:0,60,948	0/1:26,1:27:2.60:3,0,386	0/0:29,1:29:29.49:0,29,925	0/0:26,0:26:57.13:0,57,934	0/0:55,0:55:57.61:0,58,887	1/1:10,19:30:38.88:442,39,0	1/1:2,29:31:60.12:736,60,0	1/1:22,21:44:73.05:900,73,0	0/0:23,0:23:26.56:0,27,393	0/0:38,0:36:58.99:0,59,1359	0/0:25,0:25:39.58:0,40,578	0/0:19,0:19:48.16:0,48,789
chr10	59876297	.	C	CGT	3959.38	PASS	AB=0.973;AC=32;AF=0.667;AN=48;BaseQRankSum=-1.418;DP=829;FS=0.000;HRun=0;HaplotypeScore=187.3977;InbreedingCoeff=-0.2363;MQ=55.12;MQ0=15;MQRankSum=1.787;QD=5.81;ReadPosRankSum=-1.162;VQSLOD=2.9245;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:44,4:48:38.31:572,0,38	0/0:3,0:6:8.44:0,8,41	./.	./.	0/1:27,0:27:12.50:188,0,12	1/1:32,0:32:21.23:186,21,0	1/1:26,0:26:6:56,6,0	./.	0/1:23,0:22:41.77:148,0,42	0/1:33,4:37:41.14:186,0,41	1/1:20,0:21:12.96:276,13,0	1/1:35,0:35:20.02:162,20,0	1/1:24,0:24:27.88:245,28,0	1/1:34,0:35:0.69:115,1,0	1/1:38,0:37:18.05:209,18,0	0/1:28,1:27:11.10:185,0,11	0/0:16,0:17:2.84:0,3,14	0/1:32,2:34:17.57:294,0,18	0/1:19,0:17:33.20:33,0,55	0/1:22,1:24:31.04:104,0,31	0/1:50,1:48:54.34:156,0,54	1/1:31,0:33:19.56:181,20,0	1/1:24,0:24:3:25,3,0	1/1:31,1:32:18.01:199,18,0	0/1:23,0:24:72.95:73,0,119	0/1:39,0:36:10.63:203,0,11	0/1:26,0:25:42.74:164,0,43	./.
chr10	59876300	.	G	GTGTGTA	7391.89	PASS	AB=1.000;AC=37;AF=0.661;AN=56;BaseQRankSum=-0.268;DP=837;FS=30.519;HRun=0;HaplotypeScore=215.6479;InbreedingCoeff=-0.0924;MQ=53.80;MQ0=14;MQRankSum=2.658;QD=9.94;ReadPosRankSum=3.793;VQSLOD=2.4764;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:51,0:51:99:414,0,231	0/1:6,0:6:12.70:51,0,13	0/0:27,0:13:24.01:0,24,228	0/0:40,0:18:29.98:0,30,282	0/1:24,0:24:67.07:67,0,71	1/1:35,1:35:44.25:618,44,0	1/1:27,0:29:48.78:523,49,0	1/1:28,0:28:65.63:516,66,0	0/1:24,0:23:91.47:138,0,91	0/1:37,0:37:89.35:455,0,89	0/1:21,0:21:10.09:55,0,10	1/1:33,2:35:59.78:744,60,0	1/1:23,1:24:53.84:878,54,0	0/1:36,0:36:56.29:56,0,62	1/1:38,0:37:12.35:48,12,0	0/1:27,0:25:70.26:80,0,70	1/1:16,0:16:8.36:173,8,0	0/1:35,0:35:42.58:43,0,143	0/1:19,0:17:61.82:226,0,62	0/1:25,0:25:14.06:14,0,92	0/1:53,0:50:16.28:16,0,144	1/1:30,3:34:42.28:567,42,0	1/1:24,1:24:16.60:301,17,0	1/1:34,0:35:18.51:492,19,0	0/0:26,0:26:1.29:0,1,193	1/1:40,0:38:4.97:593,5,0	0/1:27,0:26:20.97:21,0,100	1/1:19,0:19:15.85:301,16,0
chr10	59876302	.	G	GTGTA	7802.36	PASS	AB=0.995;AC=38;AF=0.679;AN=56;BaseQRankSum=1.266;DP=831;FS=9.599;HRun=0;HaplotypeScore=190.5522;InbreedingCoeff=-0.1929;MQ=53.96;MQ0=14;MQRankSum=3.893;QD=10.13;ReadPosRankSum=6.031;VQSLOD=2.6111;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:53,0:53:99:587,0,170	1/1:6,0:6:1.16:52,1,0	0/0:25,0:12:23.97:0,24,228	0/0:35,0:16:29.98:0,30,282	0/1:24,0:24:44.21:135,0,44	1/1:34,2:35:44.61:646,45,0	0/1:32,0:32:70:268,0,70	1/1:26,0:26:65.63:516,66,0	0/1:24,0:23:76.66:198,0,77	0/1:37,0:37:31.31:485,0,31	1/1:21,0:21:5.68:169,6,0	1/1:36,0:36:17.88:618,18,0	1/1:24,0:25:53.84:699,54,0	0/1:34,1:35:50.28:131,0,50	1/1:37,0:36:19.79:130,20,0	0/1:26,0:25:45.55:172,0,46	1/1:15,0:15:21.89:187,22,0	0/1:33,0:33:99:147,0,120	0/1:18,0:16:25.14:234,0,25	0/1:25,0:25:47.04:47,0,56	0/1:54,0:50:76.14:76,0,94	1/1:34,0:34:44.27:537,44,0	0/1:24,0:23:4.99:237,0,5	1/1:34,1:35:0.21:416,0,0	0/1:26,0:26:40.77:41,0,122	1/1:41,0:39:28.21:662,28,0	0/1:27,0:26:60.07:110,0,60	1/1:19,0:19:15.82:301,16,0
chr10	59876304	.	G	GTA	9636.90	PASS	AB=0.763;AC=36;AF=0.643;AN=56;BaseQRankSum=1.191;DP=834;FS=15.775;HRun=0;HaplotypeScore=153.2436;InbreedingCoeff=-0.2316;MQ=53.05;MQ0=16;MQRankSum=2.294;QD=12.47;ReadPosRankSum=6.743;VQSLOD=3.1760;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:43,9:52:99:1084,0,134	1/1:6,0:6:12.34:67,12,0	0/0:25,0:11:23.98:0,24,228	0/0:36,0:12:29.98:0,30,282	0/1:2,19:22:8.89:324,0,9	1/1:35,2:36:18:541,18,0	0/1:31,0:31:99:199,0,141	1/1:25,0:25:65.63:516,66,0	0/1:20,4:23:17.91:412,0,18	0/1:36,1:37:14.20:636,0,14	1/1:2,19:21:10.71:446,11,0	0/1:37,0:37:3.39:358,0,3	1/1:23,2:25:33:420,33,0	0/1:5,30:35:31.50:193,0,32	1/1:2,34:35:20.28:326,20,0	0/1:8,17:24:18.48:289,0,18	1/1:14,0:14:31.14:201,31,0	0/1:10,25:36:48.21:441,0,48	0/1:18,1:17:17.51:248,0,18	0/1:8,18:26:17.51:148,0,18	0/1:14,40:51:67.59:236,0,68	1/1:31,3:34:3.16:374,3,0	0/1:24,0:23:5.03:211,0,5	0/1:35,0:35:49.95:313,0,50	0/1:10,17:27:49.57:151,0,50	1/1:40,1:39:70.28:918,70,0	0/1:7,19:28:40.72:281,0,41	1/1:19,0:19:17.81:303,18,0
chr10	59877295	.	A	AACAT	12823.09	PASS	AB=0.701;AC=49;AF=0.875;AN=56;BaseQRankSum=0.653;DP=942;FS=4.569;HRun=0;HaplotypeScore=239.0449;InbreedingCoeff=0.4202;MQ=52.65;MQ0=4;MQRankSum=0.851;QD=14.51;ReadPosRankSum=1.394;VQSLOD=4.3908;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:32,0:37:9:136,9,0	1/1:3,0:12:3.01:38,3,0	0/0:29,0:18:11.63:0,12,99	0/0:29,0:20:9:0,9,98	0/1:15,0:44:0.03:0,0,0	1/1:17,24:42:32.25:1263,32,0	0/1:18,3:21:8.76:771,0,9	1/1:74,0:73:99:1022,107,0	1/1:13,1:40:2.94:18,3,0	1/1:49,0:49:72.14:1163,72,0	1/1:25,0:25:2.97:25,3,0	1/1:11,27:41:48.16:1151,48,0	1/1:13,19:32:24.08:575,24,0	1/1:24,1:25:5.94:48,6,0	1/1:35,0:35:20.89:200,21,0	1/1:37,0:36:20.85:222,21,0	1/1:11,0:18:3.01:49,3,0	1/1:11,0:10:10.03:54,10,0	1/1:22,0:21:25.25:347,25,0	1/1:47,0:47:26.93:298,27,0	1/1:62,0:61:17.88:211,18,0	1/1:7,16:23:18.15:842,18,0	0/1:10,13:25:17.79:617,0,18	1/1:11,23:34:30.10:718,30,0	1/1:24,0:24:59.95:844,60,0	1/1:49,0:49:88.90:1272,89,0	1/1:36,0:36:32.94:552,33,0	1/1:19,0:19:32.95:386,33,0
chr10	59877328	.	ACATG	A	5863.73	PASS	AB=0.939;AC=20;AF=0.357;AN=56;BaseQRankSum=-5.806;DP=937;FS=11.965;HRun=0;HaplotypeScore=286.2004;InbreedingCoeff=0.4497;MQ=50.92;MQ0=5;MQRankSum=3.796;QD=12.34;ReadPosRankSum=-1.018;VQSLOD=2.7539;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:17.62:0,18,427	0/0:16,0:16:21.02:0,21,478	0/1:18,0:8:19.91:20,0,64	0/0:17,0:3:3.01:0,3,37	0/0:39,0:39:23.59:0,24,495	0/0:43,0:43:99:0,104,2350	0/0:26,0:26:61.05:0,61,1285	0/0:60,0:59:70.64:0,71,1515	0/0:34,0:34:21.13:0,21,804	0/1:45,8:53:60.99:757,0,61	1/1:26,5:31:9.03:157,9,0	0/0:43,0:43:96.33:0,96,2271	0/0:33,0:33:75.04:0,75,1664	1/1:19,2:21:2.83:34,3,0	1/1:40,3:43:31.60:782,32,0	1/1:33,5:37:34.92:578,35,0	0/0:13,0:13:11.54:0,12,170	0/0:15,0:14:3.73:0,4,364	0/1:17,1:15:12.86:269,0,13	1/1:43,5:48:56.67:885,57,0	1/1:54,8:62:26.06:377,26,0	0/0:30,0:30:81.22:0,81,1946	0/0:29,0:29:72.25:0,72,1668	0/0:31,0:31:59.97:0,60,1304	1/1:27,3:30:41.40:500,41,0	0/1:54,4:58:58.65:1113,0,59	0/1:32,5:37:42.36:189,0,42	0/1:18,0:18:22.14:202,0,22
chr10	59877330	.	ATG	A	2432.50	PASS	AB=0.989;AC=19;AF=0.339;AN=56;BaseQRankSum=6.203;DP=932;FS=6.557;HRun=0;HaplotypeScore=273.4703;InbreedingCoeff=0.4267;MQ=51.53;MQ0=5;MQRankSum=1.539;QD=5.16;ReadPosRankSum=4.335;VQSLOD=1.7745;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,1:31:20.60:0,21,414	0/0:16,0:16:24.02:0,24,446	0/1:16,0:6:4.10:4,0,211	0/0:19,1:4:6.02:0,6,101	0/0:41,0:41:29.61:0,30,530	0/0:40,0:41:99:0,103,1899	0/0:24,2:26:20.89:0,21,992	0/0:59,0:58:99:0,164,2512	0/0:34,0:34:39.08:0,39,733	0/1:51,1:52:46.29:273,0,46	1/1:31,0:31:8.23:37,8,0	0/0:42,0:42:99:0,99,1872	0/0:31,0:31:75.26:0,75,1412	1/1:21,0:21:2.79:34,3,0	1/1:44,0:44:2.27:267,2,0	0/1:38,0:37:1.47:281,0,1	0/0:13,0:13:12.13:0,12,234	0/0:14,0:13:15.44:0,15,380	0/1:17,0:14:29.96:79,0,30	1/1:49,0:49:60.54:400,61,0	1/1:60,1:61:11.80:140,12,0	0/0:30,0:30:81.22:0,81,1579	0/0:31,0:31:78.27:0,78,1459	0/0:31,0:31:59.28:0,59,1026	1/1:30,0:30:82.66:475,83,0	0/1:56,0:56:5.73:438,0,6	0/1:37,0:36:37.51:75,0,38	0/1:18,0:18:8.13:108,0,8
chr10	59877331	.	T	TACACAC	3641.14	PASS	AB=0.738;AC=12;AF=0.214;AN=56;BaseQRankSum=3.600;DP=948;FS=8.803;HRun=0;HaplotypeScore=316.1189;InbreedingCoeff=-0.1465;MQ=51.65;MQ0=6;MQRankSum=-5.307;QD=8.84;ReadPosRankSum=-0.376;VQSLOD=0.7879;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:16.80:0,17,340	0/1:15,0:15:10.03:10,0,442	0/0:16,0:6:11.49:0,11,245	0/0:23,0:4:6.02:0,6,134	0/0:41,0:41:29.59:0,30,401	0/0:41,0:41:89.40:0,89,1331	0/0:26,0:26:47.85:0,48,1106	0/1:55,0:54:99:105,0,2090	0/0:33,0:33:35.26:0,35,798	0/1:11,0:53:99:1044,0,228	0/0:5,1:33:8.59:0,9,56	0/0:42,0:42:99:0,99,1411	0/0:31,0:31:72.05:0,72,1242	1/1:3,0:22:2.65:16,3,0	0/1:26,0:44:99:126,0,175	0/1:29,0:38:99:185,0,126	0/0:13,0:13:12.51:0,13,263	0/0:15,0:14:4.79:0,5,369	0/1:5,0:13:94.31:245,0,94	0/1:36,0:49:99:275,0,176	0/0:16,0:67:35.25:0,35,257	0/0:30,0:30:80.92:0,81,1277	0/0:31,0:31:77.87:0,78,1272	0/0:31,0:31:59.83:0,60,897	0/0:31,0:31:23.94:0,24,505	0/1:9,0:58:99:1006,0,244	0/1:8,0:40:58.30:394,0,58	0/1:16,0:20:38.01:235,0,38
chr10	59877397	.	CAT	C	3017.36	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=8.860;DP=990;FS=3.297;HRun=0;HaplotypeScore=162.6253;InbreedingCoeff=0.9867;MQ=54.64;MQ0=9;MQRankSum=5.084;QD=24.94;ReadPosRankSum=3.022;VQSLOD=4.4357;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,24:35:35.82:673,36,0	0/0:15,0:15:45.15:0,45,866	0/0:34,0:8:24.08:0,24,421	0/0:40,0:12:26.41:0,26,382	1/1:2,31:33:78.25:1171,78,0	0/0:26,0:26:74.52:0,75,1445	0/0:17,0:17:41.99:0,42,716	0/0:59,0:57:99:0,171,2715	1/1:11,23:34:14.34:931,14,0	0/0:49,0:49:99:0,144,2586	0/0:37,0:37:72.23:0,72,1338	0/0:44,0:44:99:0,126,2317	0/0:41,0:41:99:0,123,2244	0/0:32,0:32:69.24:0,69,1302	0/0:48,0:48:99:0,114,2041	0/0:54,1:55:99:0,135,2432	0/0:20,0:20:32.77:0,33,552	1/1:8,10:18:13.02:399,13,0	0/0:28,0:24:72.05:0,72,1155	0/0:41,0:41:99:0,108,2021	0/0:54,0:53:99:0,99,1759	0/0:28,0:28:78.17:0,78,1366	0/0:38,0:38:99:0,108,1969	0/0:21,0:21:54.17:0,54,995	0/0:34,0:34:93.28:0,93,1668	0/0:50,0:49:99:0,147,2639	0/0:38,0:36:93.26:0,93,1668	0/0:19,0:19:38.70:0,39,824
chr10	59877429	.	C	CAT	435.22	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.242;DP=879;FS=0.000;HRun=0;HaplotypeScore=147.1658;InbreedingCoeff=0.9634;MQ=55.84;MQ0=10;MQRankSum=-2.712;QD=22.91;ReadPosRankSum=-1.217;VQSLOD=3.9094;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:56.60:0,57,650	0/0:16,0:16:42.12:0,42,531	0/0:37,0:11:26.92:0,27,298	0/0:31,0:11:11.30:0,11,76	0/0:27,0:27:57.16:0,57,725	0/0:20,0:20:51.14:0,51,633	0/0:18,0:18:48.14:0,48,603	0/0:55,0:54:99:0,147,1783	0/0:35,0:35:63.02:0,63,772	0/0:48,0:48:99:0,123,1571	0/0:29,0:29:54.14:0,54,673	0/0:39,0:39:99:0,108,1353	0/0:37,0:37:99:0,105,1334	0/0:30,0:30:69.21:0,69,879	0/0:47,0:47:81.25:0,81,1108	0/0:50,0:50:99:0,114,1427	0/0:22,0:21:41.77:0,42,545	1/1:8,10:17:33.08:530,33,0	0/0:21,0:15:36.12:0,36,467	0/0:30,0:30:75.23:0,75,960	0/0:32,0:32:54.15:0,54,674	0/0:18,0:18:45.14:0,45,578	0/0:28,0:28:69.19:0,69,866	0/0:23,0:23:51.09:0,51,611	0/0:34,0:34:63.19:0,63,804	0/0:41,0:41:99:0,117,1508	0/0:37,0:36:90.20:0,90,1116	0/0:14,0:13:29.63:0,30,324
chr10	59877499	.	CAT	C	204.53	PASS	AB=0.940;AC=5;AF=0.089;AN=56;BaseQRankSum=3.762;DP=801;FS=0.620;HRun=0;HaplotypeScore=189.0185;InbreedingCoeff=0.1815;MQ=53.33;MQ0=9;MQRankSum=0.556;QD=2.11;ReadPosRankSum=-3.991;VQSLOD=1.8548;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:44:49.27:0,49,607	0/0:11,0:11:33.01:0,33,343	0/0:45,0:20:50.25:0,50,702	0/0:37,0:21:38.51:0,39,450	0/1:15,2:16:15.31:15,0,279	0/0:29,0:29:69.63:0,70,1135	0/0:23,0:23:55.37:0,55,882	0/1:35,0:34:99:191,0,519	0/1:34,3:37:66.31:66,0,630	0/0:35,0:35:27.06:0,27,307	0/0:18,0:18:8.40:0,8,62	0/0:33,0:33:52.58:0,53,1226	0/0:36,0:36:96.69:0,97,1625	0/0:27,0:27:5.99:0,6,49	0/0:39,0:39:0.36:0,0,87	0/0:25,0:25:12.73:0,13,86	0/0:32,0:31:35.05:0,35,511	0/0:28,0:27:50.35:0,50,473	0/0:21,0:19:32.47:0,32,211	0/0:26,0:25:14.98:0,15,124	0/0:22,0:22:16.68:0,17,138	0/0:20,0:20:59.19:0,59,951	0/0:23,0:22:44.56:0,45,813	0/0:37,0:36:90.38:0,90,1487	0/0:26,0:26:8.99:0,9,75	0/0:39,0:38:44.14:0,44,347	0/0:26,0:25:24.58:0,25,170	1/1:8,0:8:5.15:44,5,0
chr10	59877501	.	TACACAC	T	4505.94	PASS	AB=0.615;AC=17;AF=0.340;AN=50;BaseQRankSum=3.575;DP=801;FS=3.375;HRun=0;HaplotypeScore=217.4374;InbreedingCoeff=0.8142;MQ=53.18;MQ0=9;MQRankSum=-3.470;QD=19.34;ReadPosRankSum=-0.642;VQSLOD=4.5505;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:43:67.12:0,67,1562	0/0:6,0:12:24.02:0,24,504	0/0:46,0:21:48.16:0,48,1233	0/0:30,0:16:24.08:0,24,590	0/0:11,0:17:30.10:0,30,678	0/0:29,0:30:60.21:0,60,1673	0/0:22,0:22:51.16:0,51,1500	0/0:15,0:37:81.44:0,81,1373	0/0:16,0:36:72.23:0,72,1717	1/1:6,29:35:81.15:1433,81,0	1/1:4,14:18:3.05:56,3,0	0/0:29,0:32:75.24:0,75,2064	0/0:36,0:37:87.26:0,87,2575	./.	1/1:9,30:39:3.01:65,3,0	1/1:5,18:23:6.02:125,6,0	0/0:12,0:33:48.12:0,48,1168	0/0:8,0:30:51.17:0,51,1328	1/1:8,14:21:45.07:716,45,0	./.	1/1:17,4:21:8.78:113,9,0	0/0:20,0:20:51.17:0,51,1478	0/0:21,0:21:45.15:0,45,1255	0/0:37,0:36:80.73:0,81,2458	./.	1/1:7,32:38:87.16:1621,87,0	1/1:7,19:26:9.03:195,9,0	0/1:3,5:8:10.56:182,0,11
chr10	59878919	.	C	CCAAT	5511.39	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=2.096;DP=874;FS=7.468;HRun=0;HaplotypeScore=142.4204;InbreedingCoeff=0.9999;MQ=86.52;MQ0=0;MQRankSum=-5.330;QD=56.82;ReadPosRankSum=-0.708;VQSLOD=6.2086;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:82,0:82:99:0,229,4165	1/1:3,11:14:36.12:908,36,0	0/0:27,0:27:72.24:0,72,1280	0/0:34,0:34:87.23:0,87,1557	0/0:32,0:32:93.31:0,93,1681	0/0:21,0:21:57.18:0,57,1019	0/0:30,0:30:38.98:0,39,1478	1/1:21,16:41:81.25:1910,81,0	0/0:21,0:21:60.21:0,60,1104	0/0:31,0:31:78.23:0,78,1341	0/0:21,0:21:60.19:0,60,1062	0/0:40,0:40:99:0,111,2017	0/0:24,0:24:72.21:0,72,1262	0/0:25,0:25:75.26:0,75,1371	0/0:27,0:27:72.25:0,72,1325	0/0:27,0:27:72.25:0,72,1311	1/1:2,39:42:99:2693,102,0	0/0:30,0:30:90.25:0,90,1544	0/0:30,0:30:75.26:0,75,1337	0/0:23,0:23:69.23:0,69,1240	0/0:68,0:68:99:0,193,3511	0/0:15,0:15:45.15:0,45,822	0/0:28,0:28:75.23:0,75,1319	0/0:32,0:32:96.31:0,96,1736	0/0:26,0:26:75.25:0,75,1326	0/0:35,0:35:99:0,102,1849	0/0:33,0:32:99:0,99,1802	0/0:15,0:15:42.14:0,42,758
chr10	59880298	.	C	CA	24254.89	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-8.595;DP=677;FS=7.591;HRun=2;HaplotypeScore=62.7826;InbreedingCoeff=0.9991;MQ=85.31;MQ0=0;MQRankSum=-10.200;QD=38.26;ReadPosRankSum=7.014;VQSLOD=4.4937;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:0,45:45:99:1728,120,0	1/1:1,13:14:33.11:475,33,0	0/0:22,0:22:56.33:0,56,631	0/0:21,0:21:53.86:0,54,600	1/1:1,16:17:45.15:648,45,0	1/1:1,19:20:57.19:821,57,0	1/1:2,19:21:57.19:821,57,0	1/1:1,23:24:63.20:882,63,0	1/1:1,27:28:63.21:907,63,0	1/1:2,14:16:42.13:586,42,0	1/1:1,11:12:33.07:451,33,0	1/1:0,26:26:75.25:1080,75,0	1/1:0,27:27:66.22:950,66,0	1/1:0,22:22:60.20:864,60,0	1/1:1,26:27:75.25:1080,75,0	1/1:1,25:26:65.94:950,66,0	1/1:3,38:41:99:1555,108,0	1/1:0,33:33:96.32:1382,96,0	1/1:2,27:29:81.20:1102,81,0	1/1:0,14:14:39.13:561,39,0	1/1:1,31:32:84.28:1208,84,0	1/1:0,17:17:48.12:668,48,0	1/1:1,12:13:36.12:518,36,0	1/1:0,46:45:99:1728,120,0	1/1:1,26:27:69.23:994,69,0	1/1:2,25:27:75.22:1043,75,0	1/1:0,21:21:60.20:864,60,0	1/1:0,9:9:27.09:389,27,0
chr10	59880906	.	GA	G	5833.85	PASS	AB=0.906;AC=32;AF=0.571;AN=56;BaseQRankSum=-0.581;DP=564;FS=0.349;HRun=11;HaplotypeScore=72.1711;InbreedingCoeff=0.7666;MQ=80.83;MQ0=0;MQRankSum=-1.281;QD=17.26;ReadPosRankSum=0.680;VQSLOD=5.6923;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:37:77.87:0,78,433	1/1:0,13:14:29:228,29,0	0/0:23,0:19:0.22:0,0,237	0/1:17,0:17:42.48:42,0,101	0/0:7,1:24:33.09:0,33,300	0/0:18,2:20:1.84:0,2,430	0/0:18,0:19:47.95:0,48,494	1/1:4,24:28:39.93:535,40,0	0/0:1,0:17:34.09:0,34,171	1/1:4,12:16:35.95:296,36,0	1/1:1,10:11:29.95:246,30,0	0/0:22,0:22:54.13:0,54,570	0/0:13,0:13:30.07:0,30,313	1/1:2,20:22:59.93:493,60,0	1/1:3,19:22:25.31:390,25,0	1/1:1,18:19:53.94:443,54,0	1/1:2,25:28:67.95:548,68,0	0/0:7,0:20:31.67:0,32,180	1/1:3,13:16:38.95:320,39,0	1/1:3,14:17:3.95:239,4,0	1/1:2,19:22:58.97:474,59,0	0/0:18,0:18:51.12:0,51,537	0/1:16,3:19:34.85:35,0,272	0/0:12,0:12:30.08:0,30,320	1/1:4,16:21:43.98:351,44,0	1/1:4,18:23:52.96:425,53,0	1/1:0,17:17:41.95:345,42,0	1/1:2,23:25:39.02:426,39,0
chr10	59881120	.	G	GC	5612.07	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=-13.284;DP=574;FS=2.601;HRun=2;HaplotypeScore=60.4820;InbreedingCoeff=0.9248;MQ=78.96;MQ0=1;MQRankSum=-1.073;QD=34.64;ReadPosRankSum=2.173;VQSLOD=5.2935;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:75.24:0,75,929	0/0:13,0:13:39.12:0,39,483	0/0:14,0:13:30.04:0,30,354	0/1:16,0:16:6.30:6,0,313	0/0:16,0:16:48.13:0,48,581	1/1:1,19:20:48.16:691,48,0	1/1:1,28:29:75.25:1080,75,0	0/0:28,0:28:81.23:0,81,972	0/0:22,0:22:63.20:0,63,780	0/0:17,0:17:48.15:0,48,593	0/0:7,0:7:21.07:0,21,260	1/1:1,22:23:66.22:949,66,0	1/1:2,18:20:57.19:816,57,0	0/0:22,0:22:60.19:0,60,743	0/0:18,0:18:54.17:0,54,669	0/0:16,0:16:45.14:0,45,558	0/0:31,0:31:87.25:0,87,1064	0/0:33,0:32:93.22:0,93,1118	0/0:31,0:31:90.28:0,90,1113	0/0:23,0:23:69.20:0,69,841	0/0:30,0:30:90.27:0,90,1102	1/1:2,16:18:45.15:647,45,0	1/1:0,16:16:42.14:601,42,0	1/1:0,20:20:57.19:821,57,0	0/0:14,0:14:39.12:0,39,483	0/0:17,0:17:48.15:0,48,595	0/0:20,0:20:57.18:0,57,706	0/0:14,0:14:42.13:0,42,520
chr10	59882421	.	T	TGAG	6576.40	PASS	AB=0.590;AC=12;AF=0.214;AN=56;BaseQRankSum=-13.407;DP=721;FS=0.387;HRun=0;HaplotypeScore=110.8675;InbreedingCoeff=0.7627;MQ=70.47;MQ0=0;MQRankSum=-1.009;QD=36.54;ReadPosRankSum=0.244;VQSLOD=5.4530;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,111,1566	0/0:2,0:10:1.88:0,2,107	0/0:23,0:21:36.09:0,36,449	0/0:25,0:22:14.69:0,15,320	0/0:16,0:16:33.11:0,33,472	1/1:6,18:24:54.19:1097,54,0	1/1:14,26:40:72.25:1463,72,0	0/0:13,0:38:23.33:0,23,317	0/0:29,0:29:66.20:0,66,926	0/0:27,0:27:68.89:0,69,925	0/0:13,0:13:27.09:0,27,386	1/1:10,17:28:45.15:913,45,0	1/1:4,19:23:42.14:853,42,0	0/0:23,0:23:54.17:0,54,753	0/0:32,0:32:69.22:0,69,967	0/0:35,0:35:87.28:0,87,1226	0/0:5,0:30:53.49:0,53,372	0/0:21,0:21:36.08:0,36,492	0/0:13,0:13:21.07:0,21,301	0/0:12,0:12:24.08:0,24,344	0/0:67,0:67:99:0,144,2060	0/1:6,11:18:12.84:517,0,13	0/1:5,11:18:9.83:575,0,10	1/1:7,22:29:57.20:1158,57,0	0/0:26,0:25:60.20:0,60,859	0/0:32,0:32:78.24:0,78,1098	0/0:13,0:13:30.10:0,30,429	0/0:6,0:6:18.02:0,18,235
chr10	59886459	.	A	AT	4415.93	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-13.225;DP=588;FS=0.786;HRun=6;HaplotypeScore=56.3597;InbreedingCoeff=0.9953;MQ=76.27;MQ0=0;MQRankSum=-0.413;QD=33.45;ReadPosRankSum=1.574;VQSLOD=4.9953;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:75.16:0,75,759	0/0:5,0:5:15.03:0,15,153	0/0:12,0:13:19.66:0,20,238	0/0:10,0:10:20.87:0,21,210	0/0:24,0:24:66.11:0,66,658	1/1:1,17:18:51.16:642,51,0	1/1:1,14:15:39.12:491,39,0	0/0:30,0:30:78.16:0,78,789	0/0:15,0:15:42.07:0,42,415	0/0:28,0:28:81.17:0,81,817	0/0:21,0:21:57.13:0,57,582	1/1:1,21:22:63.20:793,63,0	1/1:0,22:22:66.21:830,66,0	0/0:17,0:17:45.10:0,45,459	0/0:17,0:17:39.08:0,39,397	0/0:29,0:29:81.18:0,81,826	0/0:27,0:27:78.18:0,78,796	0/0:13,0:13:39.09:0,39,398	0/0:20,0:19:54.12:0,54,551	0/0:28,0:27:75.16:0,75,765	0/0:25,0:25:63.12:0,63,634	1/1:3,19:22:48.15:604,48,0	1/1:2,17:19:42.13:528,42,0	1/1:0,14:14:42.13:528,42,0	0/0:27,0:27:69.15:0,69,703	0/0:34,0:34:90.20:0,90,918	0/0:25,0:25:72.14:0,72,727	0/0:19,0:19:51.12:0,51,520
chr10	59887784	.	GT	G	3774.60	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=16.658;DP=742;FS=10.821;HRun=1;HaplotypeScore=136.9508;InbreedingCoeff=0.9546;MQ=86.31;MQ0=0;MQRankSum=-4.041;QD=17.89;ReadPosRankSum=2.071;VQSLOD=2.9243;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:99:0,99,1582	1/1:2,0:2:0.94:2,1,0	0/0:38,0:38:72.01:0,72,1524	0/0:34,0:34:93.30:0,93,1408	0/0:23,0:23:69.09:0,69,1026	1/1:2,13:15:27.36:268,27,0	1/1:7,29:36:46.69:657,47,0	1/1:6,0:6:6.85:46,7,0	0/0:32,0:32:93.32:0,93,1476	0/0:18,0:18:53.45:0,53,698	0/0:13,0:13:32.86:0,33,479	1/1:13,23:36:82.64:683,83,0	1/1:4,19:23:47.70:440,48,0	0/0:33,1:34:75.14:0,75,1374	0/0:39,0:39:99:0,110,1506	0/0:21,0:21:59.33:0,59,805	1/1:6,0:6:11.44:94,11,0	0/0:36,0:36:59.58:0,60,1504	0/0:25,0:25:74.18:0,74,917	0/0:16,0:16:42.08:0,42,635	0/0:59,0:59:99:0,174,2562	1/1:6,15:22:32.01:382,32,0	1/1:3,15:18:28.72:290,29,0	1/1:9,38:47:96.44:914,96,0	0/0:15,0:15:38.58:0,39,479	0/0:36,0:36:99:0,103,1315	0/0:34,0:34:99:0,102,1518	0/0:25,0:25:74.61:0,75,1073
chr10	59887786	.	GT	G	4196.45	PASS	AB=0.993;AC=28;AF=0.500;AN=56;BaseQRankSum=12.014;DP=750;FS=2.464;HRun=1;HaplotypeScore=134.6976;InbreedingCoeff=0.3971;MQ=84.67;MQ0=0;MQRankSum=-3.584;QD=9.80;ReadPosRankSum=-3.190;VQSLOD=0.3494;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,102,1397	1/1:2,0:2:2.80:7,3,0	0/0:37,0:37:97.14:0,97,1261	0/0:33,0:33:85.79:0,86,1169	0/0:23,0:23:45.39:0,45,857	1/1:3,13:16:40.07:321,40,0	1/1:5,29:34:68.92:642,69,0	1/1:7,0:7:9.85:72,10,0	0/0:33,0:33:93.29:0,93,1325	0/1:19,0:19:40.51:41,0,73	0/1:14,0:14:18.12:18,0,63	1/1:14,22:36:88.31:670,88,0	1/1:5,18:23:54.45:447,54,0	0/1:32,2:34:39.51:40,0,143	0/1:40,0:40:31.44:31,0,164	0/1:23,0:23:25.57:26,0,86	1/1:5,0:5:11.15:93,11,0	0/0:35,0:35:56.42:0,56,1279	0/0:25,0:25:4.94:0,5,130	0/0:16,0:16:11.87:0,12,128	0/0:60,0:60:62.36:0,62,369	1/1:9,15:24:48.17:402,48,0	1/1:3,15:18:36.23:295,36,0	1/1:8,38:46:99:912,109,0	0/1:13,0:13:47.67:48,0,50	0/1:36,0:36:99:130,0,112	0/1:38,0:38:1.66:2,0,207	0/0:26,0:26:10.49:0,10,166
chr10	59888719	.	C	CGT	1803.72	PASS	AB=0.847;AC=38;AF=0.864;AN=44;BaseQRankSum=0.738;DP=737;FS=1.320;HRun=0;HaplotypeScore=144.0405;InbreedingCoeff=-0.2257;MQ=64.31;MQ0=10;MQRankSum=-0.631;QD=3.06;ReadPosRankSum=1.549;VQSLOD=2.7199;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:32,0:31:12.02:133,12,0	1/1:9,0:10:3:26,3,0	./.	./.	1/1:21,0:20:5.98:48,6,0	0/1:21,10:34:95.86:110,0,96	0/1:37,4:42:8.13:39,0,8	1/1:30,0:30:3.31:92,3,0	1/1:21,0:26:5.99:53,6,0	1/1:16,0:16:9.26:64,9,0	./.	0/1:27,1:30:23.42:56,0,23	1/1:19,0:19:3.01:44,3,0	1/1:20,0:20:2.98:22,3,0	./.	1/1:38,0:36:12.91:99,13,0	1/1:29,0:28:14.92:118,15,0	1/1:17,1:24:6:52,6,0	1/1:20,0:19:8.97:72,9,0	./.	1/1:59,0:57:12.01:120,12,0	0/1:17,6:24:4.24:80,0,4	0/1:13,1:14:8.73:38,0,9	0/1:37,10:47:11.01:246,0,11	1/1:11,0:10:6.01:66,6,0	1/1:25,0:24:38.15:301,38,0	1/1:17,0:16:5.74:38,6,0	./.
chr10	59890706	.	T	TA	28023.56	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=1.115;DP=810;FS=2.015;HRun=3;HaplotypeScore=138.6361;InbreedingCoeff=0.9984;MQ=83.16;MQ0=0;MQRankSum=-10.105;QD=36.58;ReadPosRankSum=7.440;VQSLOD=3.1913;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:6,43:49:99:1678,120,0	1/1:1,7:8:24.08:332,24,0	0/0:28,0:28:71.90:0,72,799	0/0:16,0:16:45.09:0,45,494	1/1:1,27:28:84.28:1170,84,0	1/1:0,19:19:51.17:714,51,0	1/1:0,29:29:75.25:1050,75,0	1/1:6,20:26:60.19:822,60,0	1/1:1,24:25:63.21:882,63,0	1/1:1,21:22:63.21:880,63,0	1/1:3,14:17:45.15:626,45,0	1/1:2,38:40:99:1573,114,0	1/1:0,38:38:99:1386,99,0	1/1:1,26:27:57.81:912,58,0	1/1:0,42:42:99:1512,108,0	1/1:1,51:52:99:2058,147,0	1/1:3,39:42:99:1361,99,0	1/1:0,30:30:78.22:1070,78,0	1/1:1,20:21:60.17:801,60,0	1/1:1,20:21:60.20:840,60,0	1/1:5,41:46:99:1470,105,0	1/1:1,34:35:93.26:1263,93,0	1/1:0,21:21:53.99:755,54,0	1/1:1,26:27:69.23:965,69,0	1/1:3,25:28:72.24:1008,72,0	1/1:0,33:33:99:1385,99,0	1/1:2,29:30:81.27:1134,81,0	1/1:0,9:9:27.09:378,27,0
chr10	59892015	.	C	CTAG	10716.77	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=16.060;DP=615;FS=8.432;HRun=0;HaplotypeScore=114.9013;InbreedingCoeff=0.9359;MQ=84.12;MQ0=0;MQRankSum=-8.249;QD=49.39;ReadPosRankSum=4.132;VQSLOD=6.7899;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,13:21:18.04:414,18,0	0/0:14,0:14:42.14:0,42,762	0/0:18,0:18:54.15:0,54,939	0/0:21,0:21:40.57:0,41,874	1/1:0,1:7:3.01:70,3,0	1/1:0,7:12:12.04:295,12,0	1/1:1,28:33:69.24:1692,69,0	0/0:32,0:32:93.30:0,93,1667	1/1:0,27:27:78.27:1906,78,0	0/0:18,0:18:45.15:0,45,839	0/0:7,0:7:18.06:0,18,335	1/1:1,33:35:96.33:2322,96,0	1/1:0,22:23:57.20:1379,57,0	0/0:29,0:29:84.29:0,84,1566	0/0:20,0:20:60.19:0,60,1087	0/0:26,0:26:75.24:0,75,1367	0/0:30,0:30:90.27:0,90,1583	1/1:0,19:20:51.18:1256,51,0	0/0:18,0:18:48.16:0,48,875	0/0:17,0:17:45.15:0,45,828	0/0:68,0:68:99:0,193,3545	1/1:0,8:10:9.03:221,9,0	1/1:0,1:6:3.48:53,3,0	1/1:2,19:23:45.15:1109,45,0	0/0:22,0:22:66.23:0,66,1226	0/0:25,0:25:75.26:0,75,1398	0/0:22,0:22:66.23:0,66,1220	0/0:11,0:11:33.11:0,33,615
chr10	59892449	.	AT	A	8591.05	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-1.985;DP=455;FS=20.104;HRun=9;HaplotypeScore=49.6577;InbreedingCoeff=0.8458;MQ=71.60;MQ0=4;MQRankSum=-1.009;QD=20.12;ReadPosRankSum=4.025;VQSLOD=3.5589;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,27:33:75.03:686,75,0	1/1:1,3:4:9:82,9,0	0/0:20,0:15:17.59:0,18,265	0/0:8,0:5:11.98:0,12,118	1/1:2,17:19:42.01:384,42,0	1/1:0,20:21:56.07:500,56,0	1/1:2,11:13:18.01:164,18,0	1/1:7,26:33:78.03:709,78,0	1/1:2,14:16:27.01:247,27,0	1/1:1,11:12:33.02:302,33,0	1/1:0,15:15:39.02:354,39,0	1/1:1,7:8:18.01:165,18,0	1/1:2,9:11:24.01:220,24,0	1/1:1,8:9:12.01:110,12,0	1/1:5,14:19:27:247,27,0	1/1:2,14:16:24.01:220,24,0	1/1:0,22:22:63.03:576,63,0	1/1:2,27:29:68.08:657,68,0	1/1:4,13:16:36.01:329,36,0	1/1:0,9:9:21:192,21,0	1/1:1,19:20:42.02:384,42,0	1/1:0,13:14:35.06:306,35,0	1/1:1,11:12:27.01:247,27,0	1/1:4,13:17:33.01:302,33,0	1/1:3,17:20:45.02:412,45,0	1/1:1,14:15:42.02:384,42,0	1/1:0,17:17:42.02:384,42,0	1/1:2,3:5:3:27,3,0
chr10	59892549	.	CT	C	1537.79	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=5.767;DP=354;FS=5.855;HRun=4;HaplotypeScore=58.4108;InbreedingCoeff=0.7896;MQ=69.48;MQ0=0;MQRankSum=2.285;QD=27.46;ReadPosRankSum=2.520;VQSLOD=3.1925;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,16:16:33.10:395,33,0	0/0:6,0:6:18.05:0,18,227	0/0:18,0:12:13.25:0,13,116	0/0:8,0:6:1.13:0,1,62	1/1:3,13:16:42.12:493,42,0	0/0:14,0:14:42.12:0,42,548	0/0:2,0:3:0.99:0,1,77	0/0:36,0:36:93.19:0,93,1125	1/1:0,8:8:21.06:252,21,0	0/0:16,0:16:43.01:0,43,538	0/0:17,0:17:51.11:0,51,603	0/0:9,0:9:27.08:0,27,360	0/0:8,0:8:24.07:0,24,318	0/0:8,0:8:21.05:0,21,255	0/0:5,0:5:15.03:0,15,172	0/0:7,0:7:18.06:0,18,242	0/0:32,0:32:93.20:0,93,1150	1/1:3,13:16:48.13:555,48,0	0/0:13,0:11:33.06:0,33,382	0/0:20,0:20:57.16:0,57,737	0/0:2,0:2:6.02:0,6,80	0/0:2,0:2:3:0,3,25	0/0:6,0:6:15.02:0,15,189	0/0:3,0:3:9.01:0,9,108	0/0:14,0:14:39.12:0,39,505	0/0:14,0:14:36.07:0,36,441	0/0:18,0:18:54.13:0,54,677	0/0:19,0:19:51.17:0,51,684
chr10	59893055	.	A	AACAC	2875.79	PASS	AB=0.926;AC=33;AF=0.660;AN=50;BaseQRankSum=-6.991;DP=603;FS=7.594;HRun=0;HaplotypeScore=144.4796;InbreedingCoeff=0.2101;MQ=58.95;MQ0=21;MQRankSum=-0.533;QD=7.05;ReadPosRankSum=-1.149;VQSLOD=1.9917;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:16,0:29:24.33:24,0,46	1/1:8,2:12:15.05:289,15,0	./.	./.	0/0:11,0:21:2.80:0,3,28	1/1:23,0:23:2.99:25,3,0	0/1:31,0:29:9.24:9,0,109	1/1:28,0:27:14.99:105,15,0	./.	1/1:15,11:28:30.49:442,30,0	1/1:7,8:17:3.01:70,3,0	0/1:21,0:21:12.76:13,0,134	0/0:18,0:17:3.91:0,4,210	0/1:5,0:14:19.16:56,0,19	1/1:14,4:22:5.75:83,6,0	1/1:17,0:17:21.04:272,21,0	1/1:27,0:27:17.77:251,18,0	0/1:19,0:19:61.04:78,0,61	1/1:9,0:7:5.98:47,6,0	0/1:16,0:18:20.17:214,0,20	0/1:17,1:19:31.79:206,0,32	0/0:21,0:21:10.65:0,11,71	0/0:20,0:20:8.89:0,9,78	0/0:36,0:35:26.99:0,27,236	1/1:11,1:21:9.03:175,9,0	1/1:14,0:14:16.86:220,17,0	1/1:14,1:18:25.34:316,25,0	1/1:8,1:11:10.23:145,10,0
chr10	59893094	.	ACACG	A	624.20	PASS	AB=0.964;AC=13;AF=0.232;AN=56;BaseQRankSum=6.833;DP=654;FS=0.586;HRun=0;HaplotypeScore=139.2592;InbreedingCoeff=0.7570;MQ=58.62;MQ0=20;MQRankSum=-0.587;QD=3.45;ReadPosRankSum=1.591;VQSLOD=2.6526;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:42:15.54:0,16,283	0/0:8,0:8:12.04:0,12,247	0/0:25,0:12:28.02:0,28,269	0/0:31,0:20:45.01:0,45,422	0/0:21,0:21:15.52:0,16,148	1/1:20,0:20:12.50:206,12,0	0/1:26,1:25:1.04:66,0,1	0/0:32,0:29:60.69:0,61,588	0/0:12,0:12:25.63:0,26,183	0/0:27,0:26:42.66:0,43,670	0/0:21,0:21:30.90:0,31,244	1/1:27,1:28:8.38:102,8,0	1/1:17,1:17:27.76:251,28,0	0/0:13,0:12:17.79:0,18,191	0/0:26,0:25:43.92:0,44,616	0/0:17,0:17:37.67:0,38,488	0/0:24,0:23:2.80:0,3,303	0/0:25,0:23:1.20:0,1,281	0/0:8,0:8:20.82:0,21,147	0/0:24,0:23:49.15:0,49,489	0/0:45,0:41:65.06:0,65,713	1/1:10,10:20:0.01:1,0,0	1/1:23,0:23:3.80:20,4,0	1/1:43,2:44:11.06:137,11,0	0/0:17,0:16:26.89:0,27,315	0/0:24,0:23:17.45:0,17,389	0/0:19,0:18:42.69:0,43,505	0/0:11,0:11:20.94:0,21,260
chr10	59893096	.	ACG	A	1827.04	PASS	AB=1.000;AC=18;AF=0.321;AN=56;BaseQRankSum=5.434;DP=650;FS=18.698;HRun=0;HaplotypeScore=118.5121;InbreedingCoeff=0.6534;MQ=61.15;MQ0=17;MQRankSum=-0.969;QD=6.60;ReadPosRankSum=-0.582;VQSLOD=1.4932;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:41:43.11:0,43,320	0/0:10,0:10:11.92:0,12,143	0/0:25,0:13:30.97:0,31,286	0/0:32,0:22:50.73:0,51,451	0/0:20,0:20:24.79:0,25,162	1/1:18,1:19:29.96:248,30,0	1/1:4,23:25:20.23:235,20,0	0/0:33,0:30:37.49:0,37,551	0/0:14,0:14:31.55:0,32,222	0/0:25,0:24:38.64:0,39,539	0/0:19,0:19:30.90:0,31,218	1/1:3,25:28:12.22:226,12,0	1/1:10,8:17:46.48:540,46,0	0/1:13,0:12:6.22:6,0,81	0/0:29,0:28:52.84:0,53,519	0/0:18,0:18:37.53:0,38,381	0/0:23,0:23:3.74:0,4,166	0/0:25,0:23:26.48:0,26,301	0/0:7,0:9:22.95:0,23,148	0/0:23,0:22:23.05:0,23,318	0/1:46,0:42:6.59:7,0,489	1/1:12,6:18:11.91:180,12,0	1/1:1,19:20:11.72:155,12,0	1/1:3,40:43:26.98:341,27,0	0/0:16,0:15:29.85:0,30,256	0/1:24,0:23:36.71:37,0,323	0/1:20,0:19:48.05:48,0,238	0/0:10,0:10:18.15:0,18,163
chr10	59893156	.	ACTCGGTATCATAAATTCAAGGTTAGC	A	2775.38	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.867;DP=664;FS=1.534;HRun=0;HaplotypeScore=409.5392;InbreedingCoeff=0.9758;MQ=77.59;MQ0=0;MQRankSum=-6.120;QD=66.08;ReadPosRankSum=-1.941;VQSLOD=1.1077;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,123,12113	1/1:0,9:9:18.06:1271,18,0	0/0:24,0:24:69.16:0,69,4616	0/0:33,0:33:96.11:0,96,5761	0/0:24,0:24:66.23:0,66,7144	0/0:24,0:24:72.25:0,72,7885	0/0:30,0:30:75.26:0,75,8212	1/1:0,21:21:59.79:1005,60,0	0/0:22,0:22:66.23:0,66,7101	0/0:32,0:32:93.32:0,93,10641	0/0:16,0:16:48.16:0,48,5488	0/0:27,0:27:51.18:0,51,6213	0/0:12,0:12:36.12:0,36,3870	0/0:22,0:22:66.23:0,66,7927	0/0:31,0:31:93.31:0,93,9999	0/0:21,0:21:63.22:0,63,7298	1/1:0,12:12:9.03:636,9,0	0/0:21,0:21:63.20:0,63,5827	0/0:19,0:18:51.17:0,51,3659	0/0:21,0:21:63.19:0,63,6493	0/0:33,0:33:90.25:0,90,8329	0/0:22,0:22:51.18:0,51,5408	0/0:22,0:22:35.73:0,36,4408	0/0:38,0:38:63.22:0,63,7725	0/0:17,0:17:51.18:0,51,5614	0/0:30,0:30:90.30:0,90,9596	0/0:24,0:24:63.22:0,63,7623	0/0:14,0:14:42.14:0,42,4833
chr10	59895909	.	T	TACACAC	5699.27	PASS	AC=32;AF=0.593;AN=54;BaseQRankSum=-6.164;DP=456;FS=0.593;HRun=0;HaplotypeScore=113.9583;InbreedingCoeff=0.8829;MQ=61.03;MQ0=2;MQRankSum=-7.117;QD=23.95;ReadPosRankSum=-1.539;VQSLOD=4.1459;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:21,5:30:8.99:285,9,0	0/0:6,0:6:15.03:0,15,268	0/0:35,0:25:3.01:0,3,62	./.	1/1:9,2:11:6.02:195,6,0	0/0:22,0:24:39.13:0,39,743	0/0:12,0:12:33.11:0,33,680	0/0:25,0:30:36.09:0,36,594	1/1:3,0:13:24.08:308,24,0	1/1:11,9:24:33.06:779,33,0	1/1:7,3:10:6.02:195,6,0	0/0:12,0:13:27.08:0,27,500	0/0:11,0:12:24.08:0,24,475	1/1:9,5:15:14.93:487,15,0	1/1:10,4:16:15.05:428,15,0	1/1:5,6:13:15.05:487,15,0	0/0:18,0:20:39.13:0,39,764	1/1:9,0:21:21.12:259,21,0	1/1:6,0:9:15.94:278,16,0	1/1:6,4:11:12.04:371,12,0	1/1:15,2:19:5.48:135,5,0	0/0:13,0:12:18.52:0,19,335	0/0:16,0:18:33.11:0,33,626	0/0:13,0:15:24.08:0,24,455	1/1:10,1:14:9.03:175,9,0	1/1:5,5:12:24.08:677,24,0	1/1:8,3:12:12.04:389,12,0	1/1:7,0:7:12.04:251,12,0
chr10	59897673	.	AG	A	5605.85	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=9.716;DP=642;FS=6.494;HRun=4;HaplotypeScore=90.1662;InbreedingCoeff=0.9788;MQ=75.34;MQ0=0;MQRankSum=-1.319;QD=31.32;ReadPosRankSum=3.195;VQSLOD=5.2441;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,123,1682	0/0:7,0:7:21.07:0,21,292	0/0:13,0:13:24.66:0,25,307	0/0:15,0:15:18.70:0,19,269	0/0:19,0:19:57.18:0,57,778	1/1:2,20:22:57.17:684,57,0	1/1:1,18:19:51.16:610,51,0	0/0:23,0:23:60.20:0,60,839	0/0:23,0:23:69.23:0,69,965	0/0:30,0:30:90.29:0,90,1243	0/0:15,0:15:45.12:0,45,595	1/1:1,34:35:90.28:1076,90,0	1/1:0,21:21:57.17:683,57,0	0/0:18,0:18:51.17:0,51,713	0/0:21,0:20:63.20:0,63,863	0/0:26,0:26:72.23:0,72,991	0/0:23,0:24:61.11:0,61,914	0/0:37,0:37:99:0,108,1505	0/0:19,0:19:54.15:0,54,735	0/0:13,0:13:36.12:0,36,503	0/0:48,0:48:99:0,129,1767	1/1:0,26:26:69.21:827,69,0	1/1:1,17:18:48.15:575,48,0	1/1:1,37:38:96.29:1152,96,0	0/0:18,0:18:51.17:0,51,713	0/0:29,0:29:84.26:0,84,1155	0/0:18,0:18:54.18:0,54,756	0/0:3,0:3:6.01:0,6,67
chr10	59900161	.	A	ATC	1729.52	PASS	AB=0.830;AC=43;AF=0.796;AN=54;BaseQRankSum=-1.004;DP=754;FS=2.329;HRun=0;HaplotypeScore=146.6791;InbreedingCoeff=0.1469;MQ=51.99;MQ0=18;MQRankSum=0.079;QD=2.94;ReadPosRankSum=1.186;VQSLOD=2.5140;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:26,13:43:46.63:72,0,47	1/1:12,0:11:3.72:25,4,0	0/0:46,0:19:3.01:0,3,32	./.	1/1:12,2:22:14.90:153,15,0	1/1:32,0:32:15.50:121,16,0	0/1:24,0:23:1.43:1,0,4	1/1:23,0:22:11.54:80,12,0	0/1:12,10:23:13.43:121,0,13	1/1:28,0:27:26.29:160,26,0	1/1:23,0:23:8.72:66,9,0	1/1:25,0:25:16.88:119,17,0	1/1:32,0:31:14.29:96,14,0	1/1:33,0:30:3.83:91,4,0	1/1:32,0:29:2.69:11,3,0	1/1:27,0:22:2.97:21,3,0	1/1:26,0:24:8.60:68,9,0	0/1:15,11:25:89.86:242,0,90	1/1:19,0:19:14.64:83,15,0	1/1:22,0:22:3.01:37,3,0	1/1:16,0:15:2.75:20,3,0	0/0:24,0:23:1.23:0,1,4	0/1:16,0:16:6.58:34,0,7	1/1:23,0:23:5.10:60,5,0	0/0:25,0:23:2.80:0,3,21	1/1:29,0:27:9.11:43,9,0	1/1:17,0:14:7.23:39,7,0	1/1:14,0:14:10.72:96,11,0
chr10	59900196	.	TTCC	T	1032.49	PASS	AB=0.987;AC=28;AF=0.500;AN=56;BaseQRankSum=4.397;DP=536;FS=4.493;HRun=0;HaplotypeScore=138.7384;InbreedingCoeff=0.0800;MQ=38.40;MQ0=29;MQRankSum=-5.297;QD=3.19;ReadPosRankSum=-3.739;VQSLOD=1.4116;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:37:55.40:0,55,966	1/1:8,0:8:0.96:18,1,0	0/0:35,0:4:6.02:0,6,121	0/0:41,0:8:17.79:0,18,351	0/0:21,0:22:37.44:0,37,613	0/1:22,0:22:10.25:30,0,10	0/1:26,0:25:55.79:56,0,113	1/1:7,19:26:40.32:505,40,0	0/0:19,0:19:39.59:0,40,691	0/0:12,0:10:0.82:0,1,143	1/1:11,0:10:2.96:19,3,0	1/1:20,0:21:2.74:16,3,0	0/1:16,0:15:3.57:4,0,54	0/1:17,0:15:20.80:28,0,21	1/1:13,0:11:7.01:66,7,0	0/1:22,0:16:65.33:65,0,114	1/1:12,0:14:9.85:132,10,0	0/0:25,0:24:63.14:0,63,1151	0/1:13,0:10:32.72:33,0,59	0/1:13,0:14:21.89:22,0,58	1/1:12,0:10:1.11:3,1,0	0/1:13,0:14:13.06:48,0,13	0/1:14,0:13:26.74:45,0,27	1/1:22,0:22:4.35:17,4,0	1/1:17,0:15:2.38:36,2,0	0/0:9,0:8:14.63:0,15,110	0/0:11,0:8:5.51:0,6,53	0/1:15,0:13:58.73:59,0,83
chr10	59900199	.	C	CTCCTCCTCCTCT	10168.15	PASS	AB=1.000;AC=39;AF=0.696;AN=56;BaseQRankSum=4.784;DP=522;FS=24.643;HRun=0;HaplotypeScore=168.8279;InbreedingCoeff=0.4774;MQ=39.76;MQ0=27;MQRankSum=-9.166;QD=28.89;ReadPosRankSum=-5.688;VQSLOD=1.0278;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:34:49.07:0,49,1480	0/1:9,0:8:0.51:15,0,1	0/0:33,0:5:6.02:0,6,144	0/0:39,0:9:17.69:0,18,437	0/0:20,0:20:37:0,37,913	0/1:20,0:20:24.49:218,0,24	0/1:27,0:25:8.60:1328,0,9	1/1:26,0:26:11:267,11,0	0/0:18,0:18:41.56:0,42,1179	1/1:12,0:10:17.97:564,18,0	1/1:9,0:8:3.01:124,3,0	1/1:19,0:19:3.84:125,4,0	1/1:16,0:15:19.84:562,20,0	1/1:14,0:13:6.98:529,7,0	1/1:14,0:12:23.18:723,23,0	1/1:22,0:16:33.53:1211,34,0	0/1:18,0:13:44.81:45,0,98	0/0:25,0:25:66.15:0,66,1876	1/1:12,0:9:15.43:297,15,0	1/1:13,0:13:5.96:254,6,0	1/1:6,4:13:2.57:20,3,0	1/1:13,0:13:24.51:827,25,0	1/1:13,0:12:20.51:567,21,0	0/1:22,0:22:62.43:219,0,62	1/1:18,0:16:12:375,12,0	1/1:11,0:10:18.79:618,19,0	1/1:13,0:10:5.98:167,6,0	1/1:16,0:14:30.54:1112,31,0
chr10	59900202	.	C	CTCCTCCTCTTTT	14565.49	PASS	AB=0.935;AC=39;AF=0.696;AN=56;BaseQRankSum=1.314;DP=560;FS=14.577;HRun=0;HaplotypeScore=174.7738;InbreedingCoeff=0.5634;MQ=40.17;MQ0=28;MQRankSum=-8.330;QD=36.78;ReadPosRankSum=-5.917;VQSLOD=1.8734;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:31:55.25:0,55,1637	0/1:6,0:5:12.42:13,0,12	0/0:34,0:6:9.03:0,9,215	0/0:36,0:9:19.94:0,20,557	0/0:20,0:20:36.76:0,37,1104	1/1:13,11:25:21.55:625,22,0	1/1:24,0:27:59.29:2293,59,0	0/1:25,0:25:27.62:28,0,260	0/0:17,0:17:41.92:0,42,1186	1/1:10,0:15:28.79:694,29,0	1/1:3,0:12:6.02:165,6,0	1/1:11,13:25:18.72:558,19,0	1/1:15,0:19:31.85:1350,32,0	0/1:13,0:14:7.81:530,0,8	1/1:13,0:14:25.39:753,25,0	1/1:20,0:16:36.87:1235,37,0	0/1:16,0:12:4.59:5,0,186	0/0:24,0:24:66.17:0,66,2048	1/1:6,0:11:23.99:467,24,0	1/1:15,0:15:10.60:302,11,0	1/1:17,0:16:5.88:46,6,0	1/1:7,0:15:33.58:1353,34,0	1/1:11,1:16:39.07:1276,39,0	0/1:20,0:27:8.55:549,0,9	1/1:7,0:17:12.43:379,12,0	1/1:4,0:12:20.81:647,21,0	1/1:5,0:9:5.99:172,6,0	1/1:15,0:14:32.32:1124,32,0
chr10	59900355	.	AT	A	3685.04	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=14.507;DP=637;FS=5.082;HRun=9;HaplotypeScore=74.6046;InbreedingCoeff=0.9954;MQ=70.94;MQ0=2;MQRankSum=1.602;QD=22.33;ReadPosRankSum=1.827;VQSLOD=4.6447;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,99,1132	0/0:7,0:7:18.05:0,18,207	0/0:23,0:17:28.89:0,29,296	0/0:16,0:14:14.94:0,15,146	0/0:22,0:22:54.09:0,54,597	1/1:3,23:26:69.03:631,69,0	1/1:1,20:21:42.02:384,42,0	0/0:23,0:23:48.10:0,48,532	0/0:21,0:21:60.18:0,60,692	0/0:30,0:30:66.20:0,66,762	0/0:23,0:23:60.17:0,60,684	1/1:1,17:18:48.02:439,48,0	1/1:2,21:23:57.03:522,57,0	0/0:19,0:19:45.12:0,45,511	0/0:31,0:31:72.21:0,72,831	0/0:20,0:20:51.13:0,51,576	0/0:33,0:33:93.28:0,93,1073	0/0:20,0:20:54.16:0,54,623	0/0:15,0:15:39.10:0,39,441	0/0:31,0:31:90.25:0,90,1023	0/0:17,0:17:42.12:0,42,477	1/1:3,27:30:75.03:685,75,0	1/1:2,17:19:45.02:412,45,0	1/1:6,22:28:52.19:612,52,0	0/0:13,0:14:41.94:0,42,455	0/0:29,0:28:72.15:0,72,799	0/0:28,0:28:66.20:0,66,760	0/0:14,0:14:42.12:0,42,485
chr10	59900451	.	G	GT	3834.82	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-5.464;DP=687;FS=0.371;HRun=9;HaplotypeScore=72.3185;InbreedingCoeff=0.9887;MQ=72.34;MQ0=0;MQRankSum=0.639;QD=23.82;ReadPosRankSum=2.246;VQSLOD=4.4830;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:98.91:0,99,849	0/0:16,1:17:11.92:0,12,332	0/0:18,0:16:28.07:0,28,225	0/0:14,0:14:23.98:0,24,207	0/0:33,0:33:92.95:0,93,802	1/1:4,15:19:13.15:372,13,0	1/1:2,24:26:49.15:770,49,0	0/0:33,0:33:77.84:0,78,663	0/0:10,0:10:23.99:0,24,208	0/0:25,0:25:62.96:0,63,547	0/0:23,0:23:62.98:0,63,547	1/1:3,22:25:48.13:531,48,0	1/1:2,16:18:36.10:398,36,0	0/0:27,0:27:56.95:0,57,491	0/0:35,0:35:95.93:0,96,824	0/0:30,0:30:74.93:0,75,651	0/0:32,0:32:86.97:0,87,755	0/0:16,0:16:47.97:0,48,411	0/0:19,0:19:38.97:0,39,338	0/0:28,0:28:77.94:0,78,668	0/0:28,0:28:74.97:0,75,651	1/1:8,15:23:45.11:490,45,0	1/1:9,16:26:34.33:577,34,0	1/1:2,22:24:63.17:697,63,0	0/0:23,1:24:26.79:0,27,461	0/0:25,0:25:62.97:0,63,544	0/0:35,0:35:95.91:0,96,824	0/0:19,0:19:41.92:0,42,357
chr10	59900782	.	CT	C	4744.54	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=13.692;DP=771;FS=1.881;HRun=7;HaplotypeScore=72.4334;InbreedingCoeff=0.9999;MQ=81.86;MQ0=0;MQRankSum=-2.710;QD=25.51;ReadPosRankSum=2.422;VQSLOD=5.5956;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,42:45:99:1224,120,0	1/1:1,14:15:39.09:398,39,0	0/0:22,0:22:53.82:0,54,625	0/0:21,0:21:48.12:0,48,594	1/1:2,19:21:45.09:459,45,0	0/0:21,0:21:60.19:0,60,755	0/0:31,0:31:93.26:0,93,1152	1/1:4,19:23:54.12:551,54,0	1/1:4,30:34:87.19:888,87,0	0/0:42,0:42:99:0,114,1412	0/0:17,0:17:48.15:0,48,604	0/0:41,0:41:99:0,120,1509	0/0:19,0:19:51.16:0,51,642	0/0:37,0:37:99:0,102,1270	0/0:47,0:47:99:0,135,1692	0/0:38,0:38:99:0,105,1310	1/1:2,29:31:81.18:826,81,0	1/1:4,13:17:39.09:398,39,0	0/0:26,0:26:66.18:0,66,776	0/0:27,0:27:78.24:0,78,971	0/0:39,0:39:99:0,108,1340	0/0:22,0:22:55.42:0,55,681	0/0:26,0:26:72.23:0,72,906	0/0:21,0:21:57.18:0,57,717	0/0:15,0:15:39.12:0,39,491	0/0:21,0:21:60.19:0,60,755	0/0:39,0:39:99:0,109,1360	0/0:13,0:13:30.10:0,30,377
chr10	59901429	.	AC	A	12067.07	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=15.421;DP=735;FS=0.562;HRun=1;HaplotypeScore=67.9243;InbreedingCoeff=0.9987;MQ=64.78;MQ0=1;MQRankSum=-2.547;QD=39.43;ReadPosRankSum=4.196;VQSLOD=5.4249;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,132,2079	0/0:9,0:9:27.09:0,27,430	0/0:26,1:24:69.22:0,69,1057	0/0:30,0:30:90.26:0,90,1360	0/0:32,0:32:96.33:0,96,1530	0/0:21,0:21:63.21:0,63,1007	0/0:31,0:31:93.27:0,93,1417	0/0:38,0:38:99:0,114,1823	0/0:17,0:17:51.16:0,51,792	1/1:0,34:34:99:1410,102,0	1/1:0,14:14:42.14:584,42,0	0/0:33,0:33:99:0,99,1530	0/0:23,0:23:69.17:0,69,1009	1/1:0,29:29:84.28:1175,84,0	1/1:0,32:32:87.29:1217,87,0	1/1:0,38:38:99:1552,111,0	0/0:33,0:33:99:0,99,1514	0/0:27,0:27:75.19:0,75,1137	1/1:0,25:25:72.22:988,72,0	1/1:0,13:13:36.07:480,36,0	1/1:1,37:37:99:1468,105,0	0/0:24,0:24:72.25:0,72,1150	0/0:18,0:18:54.17:0,54,839	0/0:22,0:22:66.21:0,66,1028	1/1:0,17:17:48.16:671,48,0	1/1:0,33:33:99:1348,99,0	1/1:0,25:25:66.12:923,66,0	1/1:0,8:8:18.06:252,18,0
chr10	59904992	.	TG	T	11401.32	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=7.132;DP=790;FS=0.269;HRun=1;HaplotypeScore=86.4515;InbreedingCoeff=0.9987;MQ=76.12;MQ0=0;MQRankSum=-0.255;QD=36.90;ReadPosRankSum=3.040;VQSLOD=5.2146;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,156,2169	0/0:19,0:19:57.19:0,57,824	0/0:26,0:26:71.87:0,72,862	0/0:9,0:9:26.98:0,27,340	0/0:22,0:22:66.21:0,66,943	0/0:19,0:19:57.14:0,57,776	0/0:33,0:33:99:0,99,1387	0/0:35,0:35:99:0,102,1456	0/0:29,0:29:87.23:0,87,1193	1/1:0,31:31:90.25:1200,90,0	1/1:0,15:15:42.10:556,42,0	0/0:47,0:47:99:0,138,1955	0/0:23,0:23:69.21:0,69,987	1/1:0,35:35:96.32:1331,96,0	1/1:0,41:41:99:1579,114,0	1/1:0,26:26:60.20:837,60,0	0/0:54,0:54:99:0,162,2231	0/0:28,0:28:81.18:0,81,1118	1/1:0,19:19:57.11:690,57,0	1/1:0,17:17:47.99:640,48,0	1/1:0,52:52:99:1756,126,0	0/0:23,0:23:69.11:0,69,941	0/0:21,0:21:63.21:0,63,913	0/0:41,0:41:99:0,123,1764	1/1:0,16:16:42.14:581,42,0	1/1:0,33:33:99:1311,99,0	1/1:0,18:18:48.16:669,48,0	1/1:0,6:6:18.06:250,18,0
chr10	59906394	.	CACACACACA	C	1381.88	PASS	AB=0.960;AC=16;AF=0.296;AN=54;BaseQRankSum=5.817;DP=612;FS=45.211;HRun=0;HaplotypeScore=122.5945;InbreedingCoeff=0.1660;MQ=51.28;MQ0=128;MQRankSum=-3.014;QD=5.59;ReadPosRankSum=-0.193;VQSLOD=0.6397;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:25,1:12:12.51:221,13,0	0/0:8,0:8:23.50:0,23,268	0/0:28,0:19:57.18:0,57,744	0/0:24,0:13:34:0,34,448	./.	0/0:20,0:19:33.67:0,34,862	0/0:38,0:38:77.96:0,78,1453	0/0:15,0:13:37.01:0,37,429	1/1:18,2:8:15.52:318,16,0	0/1:11,0:5:53.26:148,0,53	0/0:9,0:7:6:0,6,66	0/0:29,0:27:51.60:0,52,983	0/0:27,0:25:54.54:0,55,967	0/1:22,0:7:44.65:45,0,279	0/0:41,0:27:6.79:0,7,88	1/1:30,0:21:1.60:37,2,0	0/0:29,0:26:3.21:0,3,716	0/1:8,7:9:20.10:71,0,20	0/1:12,0:4:31.87:72,0,32	0/0:8,0:6:1.56:0,2,41	1/1:48,0:16:27.09:366,27,0	0/0:19,0:19:32.11:0,32,689	0/0:14,0:13:20.50:0,21,359	0/0:32,0:30:50.37:0,50,1087	0/1:15,0:7:99:104,0,218	0/1:18,0:6:29.29:70,0,29	0/1:19,0:17:29.95:30,0,77	0/1:11,0:6:68.01:68,0,164
chr10	59906398	.	CACACA	C	2335.80	PASS	AB=1.000;AC=25;AF=0.481;AN=52;BaseQRankSum=6.715;DP=595;FS=40.816;HRun=0;HaplotypeScore=93.2940;InbreedingCoeff=0.6807;MQ=56.67;MQ0=128;MQRankSum=-2.267;QD=8.28;ReadPosRankSum=-0.946;VQSLOD=0.2765;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:11:12.04:174,12,0	0/0:7,0:7:3.23:0,3,226	0/0:30,0:21:63.20:0,63,825	0/0:27,0:16:39.60:0,40,528	./.	0/0:19,0:18:32.91:0,33,607	0/0:38,0:38:77.86:0,78,1205	0/0:14,0:12:34.36:0,34,449	1/1:19,0:8:18.06:266,18,0	1/1:11,0:4:12.04:163,12,0	./.	0/0:31,0:29:60.15:0,60,873	0/0:25,0:23:48.01:0,48,610	0/1:23,0:7:64.51:65,0,120	1/1:14,21:21:17.86:415,18,0	1/1:9,20:20:8.63:189,9,0	0/0:26,0:23:35.27:0,35,737	0/1:14,0:8:18.99:35,0,19	1/1:14,0:5:15.05:204,15,0	1/1:7,0:6:6.49:82,6,0	1/1:48,0:15:27.09:366,27,0	0/0:20,0:20:35.64:0,36,574	0/0:14,0:13:20.51:0,21,305	0/0:32,0:30:50.57:0,51,824	0/1:16,0:7:30.46:110,0,30	1/1:20,0:7:18.03:224,18,0	1/1:3,12:13:5.83:121,6,0	1/1:8,0:3:9.03:122,9,0
chr10	59906538	.	G	GTTTTTT	4005.65	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-0.116;DP=653;FS=4.884;HRun=9;HaplotypeScore=148.7711;InbreedingCoeff=0.9935;MQ=70.24;MQ0=3;MQRankSum=-6.846;QD=43.54;ReadPosRankSum=-2.774;VQSLOD=0.4433;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:18,8:26:58.87:1357,59,0	0/0:13,0:13:36.01:0,36,599	0/0:36,0:23:41.94:0,42,586	0/0:31,0:23:15.23:0,15,303	1/1:12,15:32:57.46:1274,57,0	0/0:22,0:22:57.10:0,57,1009	0/0:21,0:22:63.01:0,63,1077	0/0:28,0:28:49.44:0,49,1017	1/1:5,9:14:21.07:686,21,0	0/0:23,0:24:57.89:0,58,979	0/0:19,0:20:50.88:0,51,828	0/0:29,0:29:75.14:0,75,1254	0/0:22,0:22:53.99:0,54,894	0/0:19,0:21:44.66:0,45,607	0/0:26,0:26:62.21:0,62,1052	0/0:29,0:29:69:0,69,1206	0/0:32,0:32:71.89:0,72,1214	1/1:4,10:19:24.08:689,24,0	0/0:22,0:20:38.92:0,39,684	0/0:22,0:22:60.12:0,60,1045	0/0:18,0:18:48.09:0,48,814	0/0:12,0:12:30.02:0,30,525	0/0:18,0:19:41.89:0,42,713	0/0:33,0:33:84.12:0,84,1425	0/0:23,0:23:50.94:0,51,824	0/0:19,0:19:54.13:0,54,932	0/0:26,0:27:75.04:0,75,1323	0/0:10,0:10:26.91:0,27,467
chr10	59912743	.	CGTGTGTGT	C	3163.91	PASS	AB=0.751;AC=36;AF=0.692;AN=52;BaseQRankSum=6.700;DP=619;FS=15.553;HRun=0;HaplotypeScore=165.8955;InbreedingCoeff=0.5867;MQ=55.37;MQ0=15;MQRankSum=-7.219;QD=7.97;ReadPosRankSum=0.402;VQSLOD=1.6441;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:41:42.06:0,42,1238	0/0:7,0:9:21.07:0,21,627	./.	0/0:22,0:7:0:0,0,0	0/0:18,0:20:30.07:0,30,822	0/1:11,0:16:3.56:156,0,4	./.	0/0:30,0:30:15.07:0,15,168	0/1:13,0:20:15.32:15,0,57	1/1:15,7:19:15.05:346,15,0	1/1:7,3:9:3.01:74,3,0	1/1:21,11:32:11.55:232,12,0	1/1:17,0:27:18.06:335,18,0	1/1:12,1:14:9.03:186,9,0	1/1:15,10:27:18.06:409,18,0	1/1:22,4:25:8.95:117,9,0	0/0:32,0:33:42.13:0,42,1320	0/0:19,0:25:18.50:0,18,283	1/1:14,0:14:2.97:20,3,0	1/1:5,1:7:3.01:56,3,0	1/1:32,2:34:6.02:149,6,0	1/1:9,0:16:9.03:167,9,0	1/1:11,0:12:0.76:66,1,0	1/1:25,0:37:11.56:223,12,0	1/1:14,11:25:11.24:231,11,0	1/1:16,0:23:15.05:279,15,0	1/1:13,7:19:8.80:220,9,0	1/1:7,0:8:3.01:56,3,0
chr10	59914059	.	T	TGG	3130.12	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-1.369;DP=628;FS=1.552;HRun=8;HaplotypeScore=80.3112;InbreedingCoeff=0.9759;MQ=71.93;MQ0=0;MQRankSum=-3.633;QD=22.85;ReadPosRankSum=0.210;VQSLOD=2.8455;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,20:29:33.11:524,33,0	1/1:1,1:5:5.86:59,6,0	0/0:11,0:10:21.03:0,21,228	0/0:16,0:15:29.72:0,30,289	1/1:2,23:29:57.15:856,57,0	0/0:27,0:27:69.16:0,69,769	0/0:27,0:27:69.18:0,69,769	1/1:12,1:18:15.03:171,15,0	1/1:2,12:14:27.09:428,27,0	0/0:24,0:24:57.13:0,57,635	0/0:14,0:14:39.10:0,39,434	0/0:35,0:35:96.25:0,96,1070	0/0:26,0:26:69.16:0,69,759	0/0:28,0:28:78.21:0,78,868	0/0:31,0:31:78.16:0,78,860	0/0:37,0:37:99:0,102,1137	1/1:7,23:30:51.17:810,51,0	1/1:2,10:12:30.10:476,30,0	0/0:10,0:10:30.08:0,30,334	0/0:28,0:28:69.15:0,69,766	0/0:20,0:20:57.15:0,57,635	0/0:19,0:19:54.13:0,54,593	0/0:14,0:14:33.08:0,33,368	0/0:18,0:18:42.08:0,42,458	0/0:27,0:27:63.13:0,63,692	0/0:25,0:25:69.18:0,69,769	0/0:39,0:38:99:0,114,1250	0/0:15,0:15:39.04:0,39,411
chr10	59917102	.	T	TC	8027.64	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-15.221;DP=787;FS=6.624;HRun=8;HaplotypeScore=90.5073;InbreedingCoeff=0.9916;MQ=79.30;MQ0=0;MQRankSum=-1.292;QD=26.15;ReadPosRankSum=0.758;VQSLOD=5.2188;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,111,1011	0/0:11,0:11:27:0,27,245	0/0:26,0:26:47.56:0,48,401	0/0:20,0:20:47.87:0,48,410	0/0:23,0:23:59.98:0,60,544	0/0:17,0:17:39.02:0,39,357	0/0:30,0:30:69.03:0,69,631	0/0:29,0:29:53.99:0,54,492	0/0:30,0:30:84.03:0,84,764	1/1:2,20:22:57.14:645,57,0	1/1:1,5:6:9.03:104,9,0	0/0:47,1:48:97.44:0,97,1146	0/0:37,0:37:95.83:0,96,863	1/1:7,23:30:57.17:658,57,0	1/1:1,30:32:81.07:915,81,0	1/1:7,29:37:56.61:873,57,0	0/0:30,0:31:77.07:0,77,692	0/0:40,0:40:99:0,102,933	1/1:6,20:26:60.16:680,60,0	1/1:1,16:17:39.12:450,39,0	1/1:5,41:46:99:1143,99,0	0/0:20,0:21:53.06:0,53,472	0/0:16,0:16:39.01:0,39,356	0/0:52,0:52:99:0,135,1228	1/1:2,22:25:44.58:749,45,0	1/1:3,25:28:66.17:739,66,0	1/1:3,24:27:66.20:762,66,0	1/1:1,10:11:27.08:312,27,0
chr10	59919417	.	CG	C	1618.28	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=7.198;DP=630;FS=1.126;HRun=5;HaplotypeScore=60.6306;InbreedingCoeff=0.9798;MQ=87.34;MQ0=0;MQRankSum=-1.645;QD=28.39;ReadPosRankSum=0.221;VQSLOD=3.7088;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,111,1407	1/1:1,5:6:15.04:170,15,0	0/0:28,0:28:75.23:0,75,994	0/0:18,0:18:39.12:0,39,520	0/0:18,0:18:54.17:0,54,720	0/0:19,0:19:57.19:0,57,776	0/0:31,0:31:87.28:0,87,1174	1/1:0,28:28:81.21:908,81,0	0/0:24,0:24:72.20:0,72,937	0/0:17,0:17:48.13:0,48,625	0/0:7,0:7:18.06:0,18,243	0/0:32,0:32:81.26:0,81,1091	0/0:19,0:19:51.16:0,51,678	0/0:26,0:26:75.24:0,75,1009	0/0:28,0:28:81.24:0,81,1073	0/0:22,0:22:63.21:0,63,861	1/1:1,22:23:60.17:681,60,0	0/0:18,0:18:51.15:0,51,677	0/0:33,0:32:90.29:0,90,1212	0/0:16,0:16:45.15:0,45,613	0/0:41,0:41:99:0,120,1603	0/0:9,0:9:24.06:0,24,310	0/0:19,0:19:48.16:0,48,655	0/0:38,0:38:99:0,111,1479	0/0:18,0:18:54.18:0,54,738	0/0:22,0:22:60.18:0,60,789	0/0:22,0:22:58.42:0,58,763	0/0:5,0:5:12.04:0,12,164
chr10	59920564	.	T	TTTTTA	3648.08	PASS	AC=32;AF=0.615;AN=52;BaseQRankSum=-1.791;DP=270;FS=1.460;HRun=0;HaplotypeScore=60.1542;InbreedingCoeff=0.7128;MQ=68.75;MQ0=1;MQRankSum=-2.575;QD=20.49;ReadPosRankSum=1.683;VQSLOD=3.2219;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:14:5.81:75,6,0	./.	0/0:12,0:10:9.03:0,9,104	0/0:9,0:6:9.03:0,9,108	1/1:3,0:3:6.02:72,6,0	0/0:5,0:5:12:0,12,129	0/0:5,0:5:3.01:0,3,36	0/0:34,0:33:71.57:0,72,380	1/1:6,0:6:9.03:120,9,0	1/1:8,0:8:18.06:283,18,0	1/1:11,0:11:18.02:269,18,0	0/0:3,0:3:3.01:0,3,36	0/0:4,0:4:9.03:0,9,108	1/1:7,0:7:3.01:74,3,0	1/1:11,0:11:12.04:167,12,0	1/1:3,0:3:3.01:41,3,0	1/1:15,0:15:18.05:243,18,0	1/1:25,0:23:51.04:667,51,0	1/1:25,0:25:48.15:664,48,0	./.	1/1:4,0:4:9.03:125,9,0	0/0:4,0:4:3.01:0,3,36	0/0:6,0:6:11.79:0,12,156	0/0:8,0:8:9.03:0,9,108	1/1:9,0:9:15.05:253,15,0	1/1:4,0:4:6.02:83,6,0	1/1:8,0:8:3.01:72,3,0	1/1:4,21:25:15.05:441,15,0
chr10	59920570	.	T	TTTTTTTTA	2460.29	PASS	AB=0.829;AC=15;AF=0.278;AN=54;BaseQRankSum=-3.904;DP=252;FS=19.471;HRun=0;HaplotypeScore=68.0313;InbreedingCoeff=0.0692;MQ=67.05;MQ0=4;MQRankSum=-2.898;QD=13.67;ReadPosRankSum=0.862;VQSLOD=0.5096;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:2,0:16:9.17:98,0,9	./.	0/0:9,0:7:8.18:0,8,110	0/0:9,0:6:1.49:0,1,71	0/1:2,0:3:20.45:77,0,20	0/0:3,0:6:11.90:0,12,88	0/0:4,0:4:11.98:0,12,98	1/1:33,0:31:89.86:779,90,0	0/0:4,0:4:4.26:0,4,11	0/1:7,0:7:30.27:62,0,30	0/1:8,0:8:51.61:196,0,52	0/0:2,0:2:5.99:0,6,49	0/0:4,0:4:11.91:0,12,91	0/1:1,0:4:18.97:93,0,19	0/0:7,0:7:3.54:0,4,9	0/0:3,0:3:3.88:0,4,27	1/1:1,16:21:18.06:774,18,0	0/1:23,0:21:77.27:189,0,77	0/1:9,0:24:99:141,0,116	0/0:1,0:1:2.98:0,3,22	0/0:3,0:3:1.77:0,2,4	0/0:4,0:4:11.89:0,12,90	0/0:2,0:5:11.82:0,12,112	0/0:7,0:7:14.97:0,15,123	0/1:8,0:8:2.60:37,0,3	0/0:4,0:4:4.77:0,5,32	1/1:0,0:9:2.93:98,3,0	0/1:22,0:22:4.37:71,0,4
chr10	59920574	.	A	AT	2007.62	PASS	AB=0.768;AC=25;AF=0.481;AN=52;BaseQRankSum=-1.983;DP=231;FS=7.719;HRun=4;HaplotypeScore=37.1354;InbreedingCoeff=0.4058;MQ=66.09;MQ0=5;MQRankSum=1.160;QD=14.98;ReadPosRankSum=2.534;VQSLOD=1.8444;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:15,0:15:6.50:7,0,28	./.	0/0:7,0:5:9.03:0,9,104	0/0:7,0:5:9.45:0,9,109	0/1:2,1:3:32.90:33,0,35	0/0:6,0:6:11.77:0,12,120	0/0:2,0:2:3.01:0,3,36	0/0:38,0:35:85.13:0,85,480	1/1:0,4:4:9.03:121,9,0	1/1:0,6:6:18.06:251,18,0	0/1:4,3:7:37.41:124,0,37	0/0:1,0:1:3.01:0,3,36	0/0:4,0:4:9.03:0,9,108	1/1:3,0:3:2.98:21,3,0	1/1:0,5:5:12.04:168,12,0	0/1:2,1:3:29.58:36,0,30	0/0:19,0:19:17.82:0,18,93	0/1:10,13:21:21.55:423,0,22	1/1:22,0:20:18.08:523,18,0	./.	1/1:1,2:3:6.02:83,6,0	0/0:3,0:3:3.01:0,3,36	0/0:5,0:5:11.69:0,12,102	0/0:4,0:4:9.03:0,9,108	1/1:0,8:8:15.05:203,15,0	1/1:1,2:3:6.02:84,6,0	1/1:7,0:7:2.97:20,3,0	1/1:22,0:22:14.71:90,15,0
chr10	59920578	.	A	AT	286.21	PASS	AB=0.862;AC=4;AF=0.077;AN=52;BaseQRankSum=2.846;DP=213;FS=0.935;HRun=3;HaplotypeScore=42.4831;InbreedingCoeff=0.1042;MQ=63.10;MQ0=6;MQRankSum=-3.246;QD=9.23;ReadPosRankSum=1.171;VQSLOD=0.9080;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:11.87:0,12,117	./.	0/0:5,0:3:9.03:0,9,107	0/0:7,0:5:2.95:0,3,36	0/0:3,0:3:8.51:0,9,78	0/1:6,0:6:4.92:5,0,96	0/0:1,0:1:3.01:0,3,36	0/0:40,0:37:92.92:0,93,1051	1/1:3,1:4:8.24:74,8,0	0/0:6,0:6:8.94:0,9,49	0/0:5,0:5:1.65:0,2,69	0/0:1,0:1:3.01:0,3,36	0/0:3,0:3:6.02:0,6,72	0/0:3,0:3:2.60:0,3,10	0/0:5,0:5:9.79:0,10,35	0/0:2,0:2:5.69:0,6,47	0/0:19,0:19:17.83:0,18,96	0/1:13,8:19:99:304,0,130	0/0:17,0:14:24.84:0,25,146	./.	0/0:3,0:3:3.04:0,3,35	0/0:1,0:1:3:0,3,26	0/0:5,0:5:11.43:0,11,95	0/0:3,0:3:9.03:0,9,108	0/0:6,0:6:6.70:0,7,35	0/0:2,0:2:2.65:0,3,13	0/0:7,0:7:2.38:0,2,9	0/0:21,0:21:14.83:0,15,105
chr10	59920869	.	G	GACAA	30459	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-8.510;DP=614;FS=0.000;HRun=0;HaplotypeScore=88.5421;InbreedingCoeff=0.9472;MQ=80.84;MQ0=1;MQRankSum=-7.494;QD=55.08;ReadPosRankSum=6.661;VQSLOD=5.8853;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,19:22:45.15:1147,45,0	1/1:3,3:6:9.03:229,9,0	0/0:32,0:29:44.15:0,44,772	0/0:29,0:26:47.99:0,48,719	1/1:2,8:11:21.07:534,21,0	1/1:7,23:32:75.17:1798,75,0	1/1:2,16:18:45.15:1147,45,0	1/1:18,25:49:99:2394,108,0	1/1:6,22:28:69.24:1758,69,0	1/1:4,15:19:48.16:1216,48,0	1/1:3,12:15:39.13:992,39,0	1/1:3,26:29:72.25:1816,72,0	1/1:6,13:21:36.12:917,36,0	1/1:4,20:26:54.19:1354,54,0	1/1:5,22:28:63.17:1550,63,0	1/1:6,28:35:72.20:1773,72,0	1/1:3,26:30:66.23:1682,66,0	1/1:4,15:19:45.15:1147,45,0	1/1:8,8:16:30.09:714,30,0	1/1:1,7:8:18.06:439,18,0	1/1:2,14:15:42.14:1071,42,0	1/1:2,9:12:30.06:707,30,0	1/1:0,8:7:15.05:381,15,0	1/1:4,18:22:51.18:1301,51,0	1/1:3,5:8:15.05:377,15,0	1/1:3,28:31:93.22:2178,93,0	1/1:7,26:34:51.17:1300,51,0	1/1:0,7:7:21.07:536,21,0
chr10	59921204	.	G	GATTCCACTGAACAGTCCTCCTCCCTC	62382.78	PASS	AB=0.671;AC=54;AF=0.964;AN=56;BaseQRankSum=-5.841;DP=407;FS=3.055;HRun=0;HaplotypeScore=514.2047;InbreedingCoeff=-0.0496;MQ=59.18;MQ0=1;MQRankSum=0.369;QD=153.27;ReadPosRankSum=1.448;VQSLOD=3.8711;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:16:40.62:2525,41,0	1/1:4,0:4:12:604,12,0	0/1:3,0:8:18.99:1169,0,19	0/1:5,1:8:3.39:1218,0,3	1/1:17,0:17:42.05:1990,42,0	1/1:12,0:12:20.78:889,21,0	1/1:18,0:18:51.17:4089,51,0	1/1:24,0:24:69.24:4837,69,0	1/1:14,0:14:42.08:2558,42,0	1/1:15,0:15:29.52:1564,30,0	1/1:10,0:10:27.08:1590,27,0	1/1:27,0:27:55.06:2762,55,0	1/1:16,0:16:45.63:3552,46,0	1/1:31,0:31:73.38:5873,73,0	1/1:20,0:20:20.78:2552,21,0	1/1:25,0:25:55:3744,55,0	1/1:10,0:10:0.84:1470,1,0	1/1:4,0:4:7.84:659,8,0	1/1:5,0:5:9.46:729,9,0	1/1:19,0:18:42.74:2571,43,0	1/1:6,0:6:12.04:677,12,0	1/1:17,0:16:43.25:1613,43,0	1/1:12,0:12:29.97:1736,30,0	1/1:8,0:8:15.52:1002,16,0	1/1:14,0:14:40.86:2324,41,0	1/1:23,0:23:49.05:4104,49,0	1/1:21,0:21:55.34:3495,55,0	1/1:3,0:3:9.03:488,9,0
chr10	59921522	.	T	TC	498.01	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-0.518;DP=442;FS=0.000;HRun=1;HaplotypeScore=61.3889;InbreedingCoeff=0.8409;MQ=65.16;MQ0=3;MQRankSum=2.030;QD=7.66;ReadPosRankSum=-0.665;VQSLOD=0.2315;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:87.35:0,87,602	1/1:6,0:6:7.75:68,8,0	0/0:22,0:9:5.21:0,5,76	0/0:19,0:11:7.47:0,7,93	0/0:15,0:15:38.34:0,38,239	0/0:14,0:14:32.78:0,33,247	0/0:21,0:21:56.61:0,57,443	1/1:11,14:25:26.29:323,26,0	0/0:12,0:12:35.78:0,36,275	0/0:18,0:18:38.75:0,39,295	0/0:6,0:6:14.72:0,15,90	0/0:14,0:14:32.94:0,33,270	0/0:9,0:12:26.78:0,27,201	0/0:18,0:17:47.84:0,48,388	0/0:15,0:15:35.96:0,36,301	0/0:14,0:14:26.88:0,27,215	1/1:34,0:34:5.16:233,5,0	0/0:13,0:13:32.54:0,33,224	0/0:11,0:10:24:0,24,210	0/0:16,0:16:44.45:0,44,321	0/0:15,0:14:29.94:0,30,243	0/0:13,0:13:31.50:0,32,248	0/0:8,0:8:20.86:0,21,156	0/0:18,0:18:50.73:0,51,395	0/0:13,0:13:19.19:0,19,111	0/0:17,0:17:44.68:0,45,341	0/0:12,0:12:32.92:0,33,266	0/0:7,0:7:14.18:0,14,102
chr10	59922703	.	AGTTCTAG	A	4148.44	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=7.537;DP=704;FS=12.518;HRun=0;HaplotypeScore=176.2457;InbreedingCoeff=0.9994;MQ=81.25;MQ0=0;MQRankSum=-8.550;QD=57.62;ReadPosRankSum=-3.375;VQSLOD=1.7596;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,117,4512	1/1:0,14:14:39.13:1007,39,0	0/0:18,0:18:32.20:0,32,1346	0/0:21,0:21:45.17:0,45,1645	0/0:16,0:16:42.14:0,42,1679	0/0:25,0:25:75.26:0,75,2916	0/0:29,0:29:84.25:0,84,3026	1/1:4,27:31:81.24:1817,81,0	0/0:33,0:33:93.32:0,93,3701	0/0:20,0:20:57.20:0,57,2141	0/0:10,0:10:30.10:0,30,1128	0/0:42,0:42:99:0,123,4776	0/0:22,0:22:66.23:0,66,2576	0/0:33,0:33:96.33:0,96,3713	0/0:30,0:30:90.31:0,90,3358	0/0:33,0:33:96.32:0,96,3514	1/1:3,24:27:51.18:1324,51,0	0/0:19,0:19:54.19:0,54,2132	0/0:18,0:18:48.16:0,48,1784	0/0:23,0:23:69.24:0,69,2758	0/0:41,0:41:99:0,114,4352	0/0:26,0:26:69.24:0,69,2488	0/0:11,0:11:33.10:0,33,1223	0/0:44,0:44:99:0,123,4454	0/0:13,0:13:39.13:0,39,1554	0/0:17,0:17:51.18:0,51,1955	0/0:35,0:35:99:0,102,3958	0/0:13,0:13:30.10:0,30,1084
chr10	59922909	.	AACACACACACACACACACAC	A	9360.89	PASS	AB=0.698;AC=30;AF=0.556;AN=54;BaseQRankSum=2.010;DP=548;FS=1.251;HRun=0;HaplotypeScore=280.0579;InbreedingCoeff=0.6678;MQ=68.74;MQ0=12;MQRankSum=-3.345;QD=35.19;ReadPosRankSum=1.761;VQSLOD=2.9882;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:26:15.05:0,15,675	1/1:9,0:9:15.05:763,15,0	./.	0/0:44,0:30:17.49:0,17,601	0/0:15,0:19:20.28:0,20,1094	0/1:17,0:23:4.40:4,0,136	0/0:15,0:21:15.45:0,15,296	0/0:21,0:18:16.88:0,17,116	0/0:9,0:17:15.05:0,15,1108	1/1:8,3:11:6.02:320,6,0	1/1:4,3:8:6.02:260,6,0	0/0:19,0:29:38.61:0,39,478	0/0:7,0:19:31.03:0,31,234	0/1:15,8:24:0.85:987,0,1	1/1:10,13:23:27.09:1372,27,0	1/1:16,8:24:17.82:960,18,0	1/1:19,0:19:2.12:152,2,0	0/0:15,0:20:36.12:0,36,2869	1/1:11,3:14:9.03:269,9,0	1/1:1,4:5:9.03:480,9,0	1/1:15,1:17:2.90:160,3,0	0/1:3,0:10:1.38:1,0,152	0/1:7,0:15:25.49:25,0,45	0/0:28,0:36:15.89:0,16,276	1/1:6,7:14:18.06:941,18,0	1/1:5,8:12:21.02:768,21,0	1/1:16,9:25:21.07:1118,21,0	1/1:7,4:10:15.05:780,15,0
chr10	59922937	.	CACACACACACACACACACAG	C	8411.40	PASS	AB=1.000;AC=20;AF=0.357;AN=56;BaseQRankSum=7.725;DP=517;FS=1.535;HRun=0;HaplotypeScore=249.3565;InbreedingCoeff=0.1654;MQ=46.31;MQ0=23;MQRankSum=-5.151;QD=38.41;ReadPosRankSum=5.476;VQSLOD=3.5358;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:29.99:0,30,1304	1/1:2,12:14:15.05:852,15,0	0/0:16,0:2:5.67:0,6,35	0/0:30,0:11:19.61:0,20,622	0/0:25,0:25:38.32:0,38,2031	0/0:16,0:16:14.76:0,15,321	0/0:15,0:14:18.51:0,19,347	1/1:24,0:19:38.38:313,38,0	0/0:13,0:13:18.06:0,18,1249	0/1:16,0:16:99:230,0,269	0/1:8,0:8:7.97:224,0,8	0/0:37,0:37:81.14:0,81,1507	0/0:24,0:24:55.67:0,56,1036	0/1:21,0:21:97.85:847,0,98	0/1:23,0:23:99:1158,0,135	0/1:12,0:12:54.13:823,0,54	1/1:3,13:15:1.60:168,2,0	0/0:29,0:29:69.64:0,70,4273	0/1:9,0:9:99:175,0,106	0/1:10,0:10:56.93:410,0,57	0/1:14,0:13:69.31:161,0,69	0/0:14,0:14:23.21:0,23,619	0/0:17,0:15:9.40:0,9,290	0/0:33,0:32:33.76:0,34,509	1/1:10,0:9:18.06:832,18,0	0/1:17,0:14:99:586,0,99	0/1:18,0:18:99:949,0,104	1/1:7,0:5:15.05:685,15,0
chr10	59922955	.	CAG	C	527.48	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=2.610;DP=586;FS=5.700;HRun=0;HaplotypeScore=162.1620;InbreedingCoeff=0.8833;MQ=56.79;MQ0=15;MQRankSum=3.140;QD=10.14;ReadPosRankSum=-0.858;VQSLOD=2.9921;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:29.90:0,30,243	1/1:12,0:12:14.98:123,15,0	0/0:23,0:10:29.47:0,29,284	0/0:21,0:9:12.34:0,12,151	0/0:27,0:27:43.69:0,44,352	0/0:15,0:15:21.15:0,21,130	0/0:17,0:16:27.49:0,27,198	1/1:5,21:23:65.60:509,66,0	0/0:12,0:12:14.99:0,15,147	0/0:21,0:21:61.23:0,61,463	0/0:10,0:10:14.71:0,15,96	0/0:36,0:36:79.24:0,79,560	0/0:23,0:23:40.22:0,40,244	0/0:23,0:23:47.30:0,47,300	0/0:30,0:30:62.74:0,63,409	0/0:18,0:18:39.16:0,39,253	1/1:14,0:13:2.83:25,3,0	0/0:28,0:28:63.43:0,63,720	0/0:19,0:19:55.28:0,55,437	0/0:18,0:18:34.31:0,34,258	0/0:19,0:18:34.42:0,34,264	0/0:20,0:20:41.24:0,41,275	0/0:17,0:16:27.67:0,28,184	0/0:34,0:33:40.72:0,41,303	0/0:16,0:15:27.57:0,28,173	0/0:26,0:24:61.78:0,62,478	0/0:25,0:25:56.49:0,56,366	0/0:7,0:5:9.26:0,9,24
chr10	59924446	.	GGA	G	7508.49	PASS	AB=1.000;AC=25;AF=0.446;AN=56;BaseQRankSum=8.254;DP=503;FS=1.134;HRun=0;HaplotypeScore=65.5557;InbreedingCoeff=0.9391;MQ=70.57;MQ0=0;MQRankSum=-0.916;QD=31.03;ReadPosRankSum=4.319;VQSLOD=6.5265;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:68.85:0,69,1107	0/0:4,0:4:6.02:0,6,79	0/1:8,0:7:1.19:1,0,224	0/0:10,0:10:12.96:0,13,98	0/0:17,0:17:48.11:0,48,765	0/0:14,0:14:41.97:0,42,626	0/0:25,0:25:64.26:0,64,964	0/0:14,0:14:35.97:0,36,422	0/0:19,0:19:54.07:0,54,896	1/1:0,13:13:39.04:480,39,0	1/1:0,14:14:24.02:314,24,0	0/0:27,0:27:81.12:0,81,1178	0/0:18,0:18:48.11:0,48,747	1/1:2,21:23:51.17:722,51,0	1/1:0,20:20:42.14:600,42,0	1/1:0,21:21:54.18:768,54,0	0/0:19,0:19:51.10:0,51,622	0/0:26,0:26:78.21:0,78,1298	1/1:1,27:28:73.08:956,73,0	1/1:0,7:7:17.97:211,18,0	1/1:0,31:31:74.65:1069,75,0	0/0:17,0:17:48.04:0,48,727	0/0:10,0:10:23.93:0,24,307	0/0:16,0:16:45.14:0,45,798	1/1:2,20:22:47.52:643,48,0	1/1:1,16:17:50.20:601,50,0	1/1:0,26:26:48.12:672,48,0	1/1:0,12:12:33.11:471,33,0
chr10	59924447	.	GA	G	2913.91	PASS	AB=0.889;AC=25;AF=0.446;AN=56;BaseQRankSum=15.144;DP=498;FS=1.589;HRun=1;HaplotypeScore=71.1346;InbreedingCoeff=0.9104;MQ=70.74;MQ0=0;MQRankSum=-1.887;QD=12.04;ReadPosRankSum=4.282;VQSLOD=2.3681;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:27:50.49:0,50,840	0/0:4,0:4:5.99:0,6,48	0/1:7,0:7:12.01:12,0,157	0/0:9,1:10:11.63:0,12,93	0/0:17,0:17:48.04:0,48,588	0/0:14,0:14:34.91:0,35,448	0/0:21,0:21:50.54:0,51,663	0/0:14,0:14:28.10:0,28,299	0/0:19,0:19:50.69:0,51,667	1/1:13,0:13:35.13:220,35,0	1/1:14,0:14:23.29:132,23,0	0/0:27,0:27:80.91:0,81,886	0/0:17,1:18:48.07:0,48,581	1/1:22,0:23:49.54:279,50,0	1/1:20,0:20:40.94:235,41,0	1/1:21,0:21:52.54:299,53,0	0/0:18,0:18:47.80:0,48,409	0/0:25,0:25:75.14:0,75,941	1/1:28,0:28:42.31:401,42,0	1/1:7,0:7:17.61:107,18,0	1/1:31,0:31:73.11:419,73,0	0/0:17,0:17:44.52:0,45,546	0/0:10,0:10:19.83:0,20,232	0/0:15,0:15:42.14:0,42,576	1/1:20,1:22:46.52:287,47,0	1/1:16,1:17:47.68:303,48,0	1/1:26,0:26:46.44:261,46,0	1/1:12,0:12:32.17:185,32,0
chr10	59926221	.	GTGGA	G	4914.96	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=14.843;DP=850;FS=2.282;HRun=0;HaplotypeScore=144.2406;InbreedingCoeff=0.9880;MQ=67.78;MQ0=6;MQRankSum=-1.655;QD=21.94;ReadPosRankSum=4.552;VQSLOD=4.8706;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:87.17:0,87,1654	0/0:16,0:16:39.13:0,39,898	0/0:29,0:23:42.04:0,42,579	0/0:30,0:27:27.89:0,28,595	0/0:27,0:27:37.04:0,37,1174	1/1:3,22:26:50.94:778,51,0	1/1:12,26:38:27.09:446,27,0	0/0:28,0:28:54.11:0,54,843	0/0:19,0:19:51.12:0,51,1089	0/0:29,0:29:72.15:0,72,1472	0/0:17,0:17:48.06:0,48,914	1/1:8,37:45:75.50:1241,75,0	1/1:4,31:35:53.88:860,54,0	0/0:35,0:35:96.22:0,96,1930	0/0:42,0:42:99:0,108,2040	0/0:32,0:32:72.19:0,72,1531	0/0:30,0:30:83.72:0,84,1660	0/0:39,0:39:99:0,99,2163	0/0:18,0:16:35.80:0,36,517	0/0:17,0:17:42.13:0,42,868	0/0:90,0:90:99:0,229,4913	1/1:8,18:26:27.09:448,27,0	1/1:8,7:15:20.39:248,20,0	1/1:7,32:39:54.66:893,55,0	0/0:23,0:23:57.14:0,57,1173	0/0:37,0:37:84.20:0,84,1703	0/0:27,0:26:57.18:0,57,1358	0/0:4,0:4:9.03:0,9,224
chr10	59930052	.	TA	T	5760.87	PASS	AB=0.802;AC=31;AF=0.554;AN=56;BaseQRankSum=11.190;DP=559;FS=12.123;HRun=11;HaplotypeScore=61.6051;InbreedingCoeff=0.8031;MQ=77.78;MQ0=0;MQRankSum=-2.705;QD=16.46;ReadPosRankSum=-0.137;VQSLOD=4.7841;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:31,3:34:2.35:2,0,773	1/1:2,9:11:20.98:172,21,0	0/0:18,0:16:28.57:0,29,262	0/1:11,0:13:15.12:15,0,99	0/0:17,0:17:44.33:0,44,455	0/0:25,0:25:51.13:0,51,544	0/0:15,0:15:39.10:0,39,416	1/1:3,28:32:82.89:666,83,0	0/0:14,1:15:14.42:0,14,344	1/1:3,19:22:56.90:465,57,0	0/1:3,11:14:24.67:232,0,25	0/0:24,1:25:35.47:0,35,560	0/0:17,0:17:45.11:0,45,473	1/1:3,17:20:50.94:419,51,0	1/1:6,18:25:49:381,49,0	1/1:6,17:23:50.93:419,51,0	1/1:0,18:18:44.95:369,45,0	0/0:20,1:21:35.48:0,35,568	1/1:2,19:22:55.95:449,56,0	1/1:2,5:7:11.98:99,12,0	1/1:2,16:18:44.95:370,45,0	0/0:21,0:21:51.13:0,51,543	0/0:17,1:18:23.47:0,23,449	0/0:17,0:17:48.11:0,48,504	1/1:1,24:26:61.97:499,62,0	1/1:5,19:25:55.95:449,56,0	1/1:5,18:23:31.96:418,32,0	1/1:1,16:17:15.97:337,16,0
chr10	59930871	.	C	CAAG	4203.26	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-7.908;DP=750;FS=5.442;HRun=0;HaplotypeScore=105.0352;InbreedingCoeff=0.9955;MQ=82.76;MQ0=0;MQRankSum=-3.140;QD=56.04;ReadPosRankSum=0.984;VQSLOD=5.6126;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:58:99:0,171,2930	1/1:0,7:9:17.93:331,18,0	0/0:27,0:28:78.14:0,78,1139	0/0:23,0:22:48.12:0,48,746	0/0:14,0:14:33.10:0,33,582	0/0:21,0:21:63.01:0,63,1046	0/0:35,0:35:99:0,99,1528	1/1:2,19:23:69.16:1489,69,0	0/0:19,0:19:57.14:0,57,989	0/0:20,0:20:60.12:0,60,953	0/0:8,0:8:24.08:0,24,443	0/0:50,0:50:99:0,144,2579	0/0:29,0:29:86.90:0,87,1457	0/0:25,0:25:72.20:0,72,1289	0/0:32,0:32:90.22:0,90,1598	0/0:32,0:32:93.27:0,93,1649	1/1:0,42:43:99:2383,99,0	0/0:39,0:39:99:0,108,1925	0/0:25,0:25:68.88:0,69,1057	0/0:11,0:11:30.10:0,30,557	0/0:60,0:60:99:0,174,3109	0/0:11,0:11:30.10:0,30,557	0/0:11,0:11:29.75:0,30,369	0/0:34,0:34:99:0,99,1787	0/0:24,0:24:69.18:0,69,1157	0/0:28,0:28:81.15:0,81,1385	0/0:26,0:26:75.15:0,75,1301	0/0:12,0:12:30.05:0,30,516
chr10	59931548	.	GGTC	G	2918.71	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=0.658;DP=776;FS=1.600;HRun=0;HaplotypeScore=132.6524;InbreedingCoeff=0.9960;MQ=86.64;MQ0=0;MQRankSum=-2.305;QD=38.40;ReadPosRankSum=-1.862;VQSLOD=3.9041;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,120,2658	1/1:0,8:8:18.06:299,18,0	0/0:28,0:28:72.16:0,72,1449	0/0:24,0:24:65.93:0,66,1308	0/0:30,0:30:90.31:0,90,2013	0/0:21,0:21:57.20:0,57,1290	0/0:25,0:25:69.24:0,69,1558	1/1:2,34:36:99:1562,102,0	0/0:23,0:23:66.23:0,66,1463	0/0:20,0:20:60.17:0,60,1240	0/0:11,0:11:27.09:0,27,611	0/0:47,0:47:99:0,138,3082	0/0:32,0:32:90.22:0,90,1964	0/0:34,0:34:93.28:0,93,2049	0/0:38,0:38:99:0,105,2324	0/0:35,0:35:99:0,99,2229	1/1:3,29:32:72.25:1199,72,0	0/0:18,0:18:51.17:0,51,1129	0/0:24,0:23:66.23:0,66,1475	0/0:22,0:22:60.14:0,60,1288	0/0:64,0:64:99:0,165,3601	0/0:26,0:26:78.27:0,78,1753	0/0:20,0:20:60.21:0,60,1358	0/0:26,0:26:75.26:0,75,1671	0/0:27,0:27:66.23:0,66,1487	0/0:24,0:24:63.22:0,63,1393	0/0:29,0:29:84.29:0,84,1876	0/0:8,0:8:24.08:0,24,538
chr10	59931968	.	CAAAT	C	13660.20	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=17.184;DP=710;FS=0.000;HRun=0;HaplotypeScore=119.8651;InbreedingCoeff=0.9997;MQ=90.43;MQ0=0;MQRankSum=-7.517;QD=44.35;ReadPosRankSum=3.801;VQSLOD=5.3048;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:78.22:0,78,2040	0/0:18,0:18:51.17:0,51,1344	0/0:28,0:28:71.40:0,71,1812	0/0:29,0:29:68.41:0,68,1773	0/0:26,0:26:78.25:0,78,2037	0/0:20,0:20:60.19:0,60,1523	0/0:30,0:30:87.28:0,87,2245	0/0:38,0:38:99:0,108,2619	0/0:19,0:19:51.18:0,51,1358	1/1:2,29:31:84.03:1468,84,0	1/1:0,13:13:39.13:721,39,0	0/0:31,0:31:87.27:0,87,2122	0/0:35,0:35:99:0,105,2654	1/1:3,24:27:48.16:928,48,0	1/1:1,40:41:90.31:1740,90,0	1/1:3,26:29:60.21:1159,60,0	0/0:30,0:30:90.31:0,90,2390	0/0:21,0:21:63.16:0,63,1497	1/1:2,15:17:45.13:792,45,0	1/1:0,23:23:63.15:1150,63,0	1/1:1,28:29:63.13:1176,63,0	0/0:14,0:14:42.09:0,42,1048	0/0:18,0:18:51.17:0,51,1324	0/0:18,0:18:54.17:0,54,1386	1/1:2,23:25:63.22:1212,63,0	1/1:2,28:30:81.25:1521,81,0	1/1:1,29:30:69.24:1335,69,0	1/1:0,13:13:24.08:459,24,0
chr10	59932276	.	TA	T	4139.58	PASS	AB=0.807;AC=33;AF=0.589;AN=56;BaseQRankSum=6.710;DP=615;FS=10.494;HRun=13;HaplotypeScore=78.7072;InbreedingCoeff=0.5844;MQ=76.93;MQ0=0;MQRankSum=-1.459;QD=9.72;ReadPosRankSum=3.091;VQSLOD=2.2673;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,1:28:43.79:0,44,548	1/1:0,0:9:13.84:41,14,0	0/0:24,0:20:22.32:0,22,175	0/1:12,2:14:35.60:36,0,51	0/0:23,2:26:13.11:0,13,437	0/0:15,3:18:11.14:0,11,270	0/0:16,1:18:25.97:0,26,384	1/1:9,1:36:46.46:146,46,0	0/1:7,3:10:19.78:20,0,151	1/1:9,17:27:48.74:338,49,0	1/1:7,17:24:18.41:291,18,0	0/0:15,1:16:17.12:0,17,315	0/1:20,3:25:1.91:2,0,293	1/1:6,13:21:8.63:217,9,0	1/1:4,25:30:73.62:531,74,0	0/1:9,13:23:8.59:262,0,9	1/1:3,1:35:62.93:194,63,0	0/0:17,0:18:35.64:0,36,296	1/1:5,8:15:1.68:151,2,0	1/1:4,17:23:27.86:331,28,0	1/1:4,12:16:26.80:195,27,0	0/0:21,1:22:6.14:0,6,344	0/1:17,3:20:19.54:20,0,247	0/0:16,3:19:23.14:0,23,379	1/1:4,25:30:3.98:342,4,0	1/1:5,23:29:70.41:500,70,0	1/1:7,19:27:54.76:384,55,0	1/1:2,8:11:19.92:137,20,0
chr10	59935286	.	CTT	C	717.51	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=-0.077;DP=559;FS=3.622;HRun=16;HaplotypeScore=86.3056;InbreedingCoeff=0.8820;MQ=62.35;MQ0=9;MQRankSum=-0.712;QD=7.10;ReadPosRankSum=1.741;VQSLOD=0.8387;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:11,16:30:37.38:327,37,0	0/0:6,0:11:15.03:0,15,161	0/1:23,0:6:1.48:1,0,49	0/0:21,0:15:17.88:0,18,112	1/1:6,9:17:20.01:188,20,0	0/0:21,0:23:52.84:0,53,592	0/0:19,0:18:24.02:0,24,280	0/0:14,0:19:35.48:0,35,340	1/1:5,4:9:7.89:96,8,0	0/0:26,0:29:48.20:0,48,504	0/0:8,0:10:22.92:0,23,245	0/0:13,0:14:26.57:0,27,318	0/0:23,0:24:52.41:0,52,512	0/0:17,0:18:32.52:0,33,366	0/0:20,0:23:33.86:0,34,529	0/0:16,0:22:22.79:0,23,465	0/0:14,0:25:63.05:0,63,664	1/1:6,13:21:35.15:260,35,0	0/0:26,0:26:45.79:0,46,515	0/0:15,1:17:15.71:0,16,364	0/0:10,0:12:23.38:0,23,252	0/0:16,1:21:26.88:0,27,422	0/0:13,0:14:30.04:0,30,368	0/0:20,0:21:45.52:0,46,529	0/0:15,0:17:39.08:0,39,454	0/0:19,1:20:18.86:0,19,420	0/0:20,1:29:34.99:0,35,478	0/0:10,0:11:20.42:0,20,221
chr10	59938392	.	A	AC	4547.01	PASS	AB=1.000;AC=50;AF=0.893;AN=56;BaseQRankSum=-3.716;DP=531;FS=6.215;HRun=11;HaplotypeScore=72.5526;InbreedingCoeff=0.2531;MQ=74.77;MQ0=0;MQRankSum=0.918;QD=8.78;ReadPosRankSum=1.092;VQSLOD=3.7593;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:19:3.69:30,4,0	1/1:5,0:9:5.68:28,6,0	0/1:24,0:23:39.33:39,0,44	0/1:16,0:15:19.07:19,0,45	0/1:3,0:3:0:0,0,0	1/1:19,0:19:13.67:210,14,0	1/1:25,2:27:27.13:307,27,0	1/1:3,0:19:19.96:117,20,0	0/1:11,0:11:0:0,0,0	1/1:16,1:17:26.38:185,26,0	1/1:18,0:18:17.92:152,18,0	1/1:18,2:20:14.99:134,15,0	1/1:24,2:26:35.73:291,36,0	1/1:26,3:29:24.52:352,25,0	1/1:32,1:32:30.37:361,30,0	1/1:22,4:26:47.47:395,47,0	1/1:7,0:19:19.65:96,20,0	0/0:2,0:12:0.47:0,0,1	1/1:13,0:10:5.68:41,6,0	1/1:9,0:9:11.91:90,12,0	1/1:28,2:30:47.31:352,47,0	1/1:10,1:11:11.94:108,12,0	1/1:15,1:16:11.89:88,12,0	1/1:38,3:41:59.68:490,60,0	1/1:11,0:11:11.93:99,12,0	1/1:12,0:11:14.53:89,15,0	1/1:21,2:23:24.16:324,24,0	1/1:12,1:13:17.92:151,18,0
chr10	59938393	.	C	CT	8364.56	PASS	AB=0.838;AC=49;AF=0.875;AN=56;BaseQRankSum=-5.776;DP=528;FS=19.367;HRun=0;HaplotypeScore=58.1955;InbreedingCoeff=0.4712;MQ=74.24;MQ0=0;MQRankSum=-2.801;QD=16.70;ReadPosRankSum=2.735;VQSLOD=4.8055;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:18:30.75:283,31,0	0/1:9,0:9:6.50:79,0,7	0/1:25,0:23:2.97:3,0,283	0/0:16,0:14:26.63:0,27,301	1/1:2,0:2:5.99:50,6,0	0/1:1,18:19:7.35:355,0,7	1/1:4,23:27:46.26:642,46,0	1/1:18,1:18:32.30:284,32,0	0/0:3,8:11:3:0,3,25	1/1:3,15:18:42.04:472,42,0	1/1:1,16:17:20.99:235,21,0	1/1:2,18:20:18:206,18,0	1/1:3,21:26:38.82:476,39,0	1/1:6,22:30:22.14:497,22,0	1/1:3,30:32:48.40:678,48,0	1/1:4,21:26:47.85:572,48,0	1/1:17,2:18:28.56:191,29,0	1/1:14,0:13:2.48:11,2,0	1/1:0,11:9:26.99:241,27,0	1/1:0,7:9:14.09:173,14,0	1/1:3,27:31:54.07:662,54,0	1/1:1,9:10:12.03:128,12,0	1/1:1,15:16:14.99:167,15,0	1/1:6,37:43:60.12:748,60,0	1/1:2,10:12:12.03:141,12,0	1/1:0,12:11:26.94:293,27,0	1/1:4,17:22:31.28:555,31,0	1/1:1,12:13:18.05:222,18,0
chr10	59940197	.	AT	A	10966.96	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=12.134;DP=700;FS=2.415;HRun=7;HaplotypeScore=71.3427;InbreedingCoeff=0.9992;MQ=80.78;MQ0=0;MQRankSum=-1.772;QD=26.81;ReadPosRankSum=0.254;VQSLOD=5.5494;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:42.13:0,42,523	1/1:0,9:9:27.06:276,27,0	0/0:17,0:17:36.03:0,36,424	0/0:22,0:21:48.01:0,48,538	0/0:38,0:38:99:0,108,1343	0/0:31,0:31:87.28:0,87,1094	0/0:14,0:14:39.12:0,39,491	1/1:4,32:36:96.21:979,96,0	0/0:16,0:16:45.14:0,45,566	1/1:0,22:22:63.14:643,63,0	1/1:1,17:18:51.11:514,51,0	0/0:33,0:33:99:0,99,1245	0/0:27,0:27:78.25:0,78,981	1/1:1,31:32:81.18:826,81,0	1/1:2,34:36:99:1010,99,0	1/1:3,32:35:87.19:888,87,0	1/1:1,16:17:39.56:398,40,0	0/0:8,0:8:21.07:0,21,264	1/1:5,26:31:78.16:789,78,0	1/1:3,33:36:67.97:971,68,0	1/1:0,18:18:45.10:459,45,0	0/0:21,0:21:60.18:0,60,743	0/0:30,0:30:84.27:0,84,1057	0/0:20,0:20:57.17:0,57,703	1/1:2,21:23:57.13:582,57,0	1/1:2,37:39:99:1132,111,0	1/1:2,41:43:99:1194,117,0	1/1:4,10:14:30.07:306,30,0
chr10	59945213	.	TCAGTTCC	T	11863.58	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=13.600;DP=547;FS=0.372;HRun=0;HaplotypeScore=134.5917;InbreedingCoeff=0.9951;MQ=56.55;MQ0=3;MQRankSum=-15.603;QD=59.32;ReadPosRankSum=0.799;VQSLOD=5.0161;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,102,3941	0/0:4,0:4:12.04:0,12,414	0/0:28,0:23:63.22:0,63,2165	0/0:18,0:16:45.15:0,45,1718	0/0:23,0:23:66.23:0,66,2542	0/0:23,0:23:63.22:0,63,2359	0/0:20,0:20:60.21:0,60,2189	0/0:30,0:28:81.28:0,81,3041	0/0:25,0:25:72.25:0,72,2750	1/1:0,15:15:45.14:1058,45,0	1/1:1,10:11:27.09:576,27,0	0/0:22,0:22:54.19:0,54,2123	0/0:27,0:27:81.28:0,81,2954	1/1:0,17:17:39.13:1012,39,0	1/1:3,18:21:48.16:1156,48,0	1/1:2,18:20:45.15:1108,45,0	0/0:27,0:27:81.28:0,81,3015	0/0:23,0:23:69.24:0,69,2625	1/1:2,15:16:45.15:1140,45,0	1/1:0,10:10:27.06:535,27,0	1/1:1,13:14:30.06:536,30,0	0/0:11,0:11:27.09:0,27,1016	0/0:11,0:11:33.11:0,33,1319	0/0:20,0:20:57.18:0,57,2040	1/1:0,19:19:51.17:1223,51,0	1/1:1,19:20:54.18:1293,54,0	1/1:1,22:23:54.19:1388,54,0	1/1:0,13:13:33.11:839,33,0
chr10	59945338	.	C	CATA	1227.41	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-3.894;DP=538;FS=0.773;HRun=0;HaplotypeScore=77.2323;InbreedingCoeff=0.8882;MQ=63.07;MQ0=2;MQRankSum=-5.568;QD=38.36;ReadPosRankSum=-2.791;VQSLOD=3.3199;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:33:99:0,99,1533	1/1:1,4:5:7.27:137,7,0	0/0:9,0:5:3.37:0,3,43	0/0:18,0:9:10.39:0,10,121	0/0:24,0:24:66.18:0,66,981	0/0:21,0:21:63.19:0,63,981	0/0:10,0:10:27.09:0,27,435	1/1:1,11:13:39.12:770,39,0	0/0:24,0:24:66.23:0,66,1070	0/0:26,0:26:72.24:0,72,1143	0/0:28,0:28:81.27:0,81,1297	0/0:16,0:16:42.13:0,42,659	0/0:16,0:16:39.13:0,39,637	0/0:20,0:20:54.18:0,54,879	0/0:22,0:22:63.20:0,63,999	0/0:21,0:20:57.18:0,57,903	1/1:3,10:13:27.19:456,27,0	0/0:27,0:27:78.27:0,78,1249	0/0:24,0:24:63.20:0,63,980	0/0:29,0:29:87.30:0,87,1415	0/0:9,0:9:24.08:0,24,392	0/0:4,0:4:12.04:0,12,192	0/0:13,0:13:36.12:0,36,588	0/0:10,0:10:30.10:0,30,490	0/0:39,0:39:99:0,111,1800	0/0:19,0:19:51.17:0,51,830	0/0:29,0:29:87.27:0,87,1368	0/0:11,0:11:33.11:0,33,539
chr10	59946353	.	C	CT	15262.94	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=18.497;DP=763;FS=1.698;HRun=1;HaplotypeScore=220.7015;InbreedingCoeff=0.9996;MQ=73.33;MQ0=0;MQRankSum=-7.083;QD=28.69;ReadPosRankSum=2.990;VQSLOD=4.5703;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:61,0:61:99:0,160,2057	0/0:10,0:10:30.08:0,30,375	0/0:10,0:10:24.07:0,24,293	0/0:24,0:24:52.63:0,53,624	0/0:30,0:30:84.24:0,84,1058	1/1:0,22:22:63.06:674,63,0	1/1:4,20:24:50.96:513,51,0	0/0:23,0:23:66.21:0,66,857	0/0:26,0:26:75.22:0,75,944	1/1:4,23:27:72.07:710,72,0	1/1:4,26:30:74.60:706,75,0	1/1:0,33:33:93.12:1040,93,0	1/1:5,23:28:80.57:852,81,0	1/1:2,32:34:99:1068,99,0	1/1:2,34:36:99:1244,105,0	1/1:0,32:32:90.11:991,90,0	0/0:24,0:24:69.22:0,69,896	0/0:23,0:23:69.22:0,69,884	1/1:1,16:17:48.08:516,48,0	1/1:2,27:29:74.95:753,75,0	1/1:2,25:28:69.46:724,69,0	1/1:5,25:30:83.87:827,84,0	1/1:3,15:18:44.65:434,45,0	1/1:1,34:35:96.19:1101,96,0	1/1:1,24:26:71.96:700,72,0	1/1:1,25:26:78.09:814,78,0	1/1:1,34:36:99:1011,105,0	1/1:0,21:21:54.11:586,54,0
chr10	59946355	.	ACTGG	A	22869.94	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=16.263;DP=740;FS=2.507;HRun=0;HaplotypeScore=232.9612;InbreedingCoeff=0.9998;MQ=73.46;MQ0=0;MQRankSum=-7.605;QD=44.93;ReadPosRankSum=3.112;VQSLOD=4.8630;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:61,0:61:99:0,162,2744	0/0:10,0:10:30.09:0,30,806	0/0:11,0:11:30.10:0,30,798	0/0:22,0:22:47.42:0,47,1056	0/0:30,0:30:87.28:0,87,1455	1/1:2,19:21:63.20:996,63,0	1/1:7,11:18:51.02:657,51,0	0/0:22,0:22:66.21:0,66,1775	0/0:27,0:27:75.24:0,75,1269	1/1:0,23:23:69.23:1091,69,0	1/1:2,26:28:75.16:1123,75,0	1/1:3,30:33:96.31:1566,96,0	1/1:4,23:27:77.26:1223,77,0	1/1:0,32:32:93.32:1557,93,0	1/1:1,34:35:99:1808,105,0	1/1:4,28:32:95.81:1571,96,0	0/0:25,0:25:75.26:0,75,2128	0/0:23,0:23:69.20:0,69,1160	1/1:0,16:16:48.16:802,48,0	1/1:4,25:29:76.54:1109,77,0	1/1:4,22:26:66.07:1021,66,0	1/1:4,25:29:84.26:1201,84,0	1/1:1,14:18:45.13:656,45,0	1/1:3,32:35:96.31:1634,96,0	1/1:3,22:25:72.24:1132,72,0	1/1:1,25:26:78.26:1265,78,0	1/1:2,33:35:99:1544,102,0	1/1:4,17:21:54.18:914,54,0
chr10	59946359	.	G	GC	6039.19	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-16.871;DP=760;FS=2.066;HRun=0;HaplotypeScore=256.3580;InbreedingCoeff=0.9993;MQ=72.78;MQ0=0;MQRankSum=7.333;QD=41.94;ReadPosRankSum=0.960;VQSLOD=3.7989;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,63:64:99:2508,159,0	0/0:10,0:10:30.09:0,30,404	0/0:11,0:11:27.09:0,27,377	0/0:21,1:22:28.67:0,29,555	1/1:1,30:31:84.29:1330,84,0	0/0:23,0:23:49.91:0,50,178	0/0:17,0:17:37.61:0,38,150	0/0:22,0:22:63.20:0,63,866	1/1:0,27:27:72.25:1149,72,0	0/0:24,0:24:56.90:0,57,203	0/0:28,0:28:60.65:0,61,217	0/0:32,0:32:76.49:0,76,288	0/0:28,0:28:65.58:0,66,249	0/0:33,0:33:80.23:0,80,303	0/0:37,0:37:84.19:0,84,311	0/0:33,0:33:76.98:0,77,290	0/0:25,0:25:75.22:0,75,1029	1/1:0,22:22:66.23:1053,66,0	0/0:23,0:23:56.18:0,56,251	0/0:29,0:29:64.77:0,65,272	0/0:26,0:26:54.77:0,55,203	0/0:30,0:30:63.48:0,63,239	0/0:18,0:18:34.81:0,35,125	0/0:38,0:38:83.77:0,84,323	0/0:25,0:25:60.52:0,61,227	0/0:27,0:27:57.91:0,58,214	0/0:34,0:34:85.20:0,85,315	0/0:21,0:21:45.30:0,45,164
chr10	59948070	.	T	TA	12006.95	PASS	AB=1.000;AC=53;AF=0.946;AN=56;BaseQRankSum=-5.177;DP=366;FS=5.394;HRun=5;HaplotypeScore=31.1772;InbreedingCoeff=0.5926;MQ=72.54;MQ0=1;MQRankSum=-3.152;QD=34.21;ReadPosRankSum=3.855;VQSLOD=4.4760;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,17:17:45.15:592,45,0	1/1:0,6:6:18.06:237,18,0	0/0:15,0:10:10.61:0,11,156	0/1:14,0:9:1.71:2,0,77	1/1:0,12:12:33.11:434,33,0	1/1:3,17:20:45.15:592,45,0	1/1:1,5:6:15.05:193,15,0	1/1:2,24:26:75.22:954,75,0	1/1:0,12:12:30.10:395,30,0	1/1:1,13:14:39.13:512,39,0	1/1:0,13:13:36.12:473,36,0	1/1:0,2:2:6.02:79,6,0	1/1:0,5:5:12.04:158,12,0	1/1:0,8:8:24.08:316,24,0	1/1:0,8:8:18.06:237,18,0	1/1:0,14:14:42.14:547,42,0	1/1:2,26:28:72.23:947,72,0	1/1:2,13:15:39.13:508,39,0	1/1:2,16:18:48.15:616,48,0	1/1:1,10:11:30.10:395,30,0	1/1:0,2:2:6.02:79,6,0	1/1:0,1:1:3.01:39,3,0	1/1:2,4:6:15.05:195,15,0	1/1:0,5:5:15.05:197,15,0	1/1:0,14:14:42.14:553,42,0	1/1:0,33:33:99:1301,99,0	1/1:1,16:17:48.16:627,48,0	1/1:0,24:23:63.20:829,63,0
chr10	59949316	.	C	CT	4267.64	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-9.833;DP=689;FS=8.193;HRun=1;HaplotypeScore=66.1776;InbreedingCoeff=0.9952;MQ=78.84;MQ0=0;MQRankSum=-3.730;QD=41.84;ReadPosRankSum=1.864;VQSLOD=5.1272;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,49:49:99:2113,141,0	0/0:11,0:11:30.06:0,30,358	0/0:17,0:17:42.02:0,42,533	0/0:27,0:27:78.18:0,78,936	1/1:1,23:24:66.18:964,66,0	0/0:28,0:28:81.23:0,81,1021	0/0:31,0:31:93.27:0,93,1178	0/0:32,0:32:84.25:0,84,1055	1/1:0,24:24:66.22:989,66,0	0/0:15,0:15:42.12:0,42,513	0/0:19,0:19:54.16:0,54,686	0/0:29,0:29:87.28:0,87,1130	0/0:38,0:38:99:0,111,1440	0/0:20,0:20:60.18:0,60,764	0/0:31,0:31:93.30:0,93,1208	0/0:27,0:27:81.25:0,81,1037	0/0:23,0:23:60.19:0,60,779	1/1:1,4:5:15.02:201,15,0	0/0:16,0:16:45.14:0,45,572	0/0:34,0:34:93.30:0,93,1207	0/0:46,0:46:99:0,138,1761	0/0:13,0:13:30.08:0,30,374	0/0:22,0:22:63.20:0,63,818	0/0:25,0:25:72.21:0,72,918	0/0:21,0:21:63.20:0,63,818	0/0:25,0:25:69.22:0,69,885	0/0:26,0:25:78.25:0,78,1012	0/0:11,0:11:33.11:0,33,428
chr10	59949756	.	CT	C	2427.96	PASS	AB=0.778;AC=29;AF=0.518;AN=56;BaseQRankSum=-2.632;DP=498;FS=11.391;HRun=15;HaplotypeScore=65.3793;InbreedingCoeff=0.5525;MQ=76.10;MQ0=6;MQRankSum=-2.152;QD=6.62;ReadPosRankSum=0.542;VQSLOD=1.5611;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:31:52.07:0,52,323	0/1:5,5:10:31.72:76,0,32	0/1:42,1:23:10.10:10,0,118	0/1:43,1:17:0.19:0,0,88	0/0:7,0:24:39.52:0,40,220	0/0:9,0:9:18:0,18,158	0/0:14,0:14:29.98:0,30,260	1/1:8,14:22:32.31:211,32,0	0/0:13,0:15:32.92:0,33,217	1/1:8,16:24:51.10:318,51,0	1/1:8,12:21:5.30:152,5,0	0/0:13,0:13:22.09:0,22,188	0/0:10,0:10:21:0,21,184	0/1:5,3:9:4.05:88,0,4	1/1:7,10:17:26.58:172,27,0	1/1:6,13:19:32.28:211,32,0	1/1:17,14:31:57.98:367,58,0	0/1:20,1:21:6.04:6,0,313	1/1:5,7:12:23.58:153,24,0	1/1:12,6:18:1.88:127,2,0	1/1:5,5:12:24.62:141,25,0	0/0:2,0:2:5.49:0,5,34	0/0:9,0:9:17.95:0,18,148	0/0:4,0:4:9:0,9,79	0/1:6,9:15:0.19:117,0,0	1/1:9,10:19:20.38:198,20,0	1/1:5,8:15:30.66:184,31,0	0/1:3,9:11:5.63:95,0,6
chr10	59950520	.	TA	T	1814.57	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.857;DP=728;FS=1.724;HRun=3;HaplotypeScore=67.1803;InbreedingCoeff=0.9999;MQ=84.19;MQ0=0;MQRankSum=-1.310;QD=30.24;ReadPosRankSum=-1.112;VQSLOD=2.8638;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:93.30:0,93,1320	1/1:0,13:13:35.92:446,36,0	0/0:21,0:20:60.15:0,60,818	0/0:24,0:24:63.19:0,63,877	0/0:32,0:32:93.30:0,93,1319	0/0:39,0:39:99:0,111,1584	0/0:25,0:25:72.24:0,72,1036	1/1:3,25:28:75.22:916,75,0	0/0:18,0:18:54.18:0,54,774	0/0:33,0:33:99:0,99,1410	0/0:37,0:37:99:0,111,1578	0/0:25,0:25:72.23:0,72,1008	0/0:31,0:31:87.27:0,87,1215	0/0:32,0:32:87.28:0,87,1233	0/0:30,0:30:90.28:0,90,1258	0/0:20,0:20:57.19:0,57,820	1/1:1,18:19:48.15:595,48,0	0/0:17,0:17:48.13:0,48,652	0/0:20,0:20:57.17:0,57,787	0/0:26,0:26:78.26:0,78,1120	0/0:29,0:29:81.27:0,81,1166	0/0:25,0:25:50.53:0,51,1009	0/0:22,0:22:63.21:0,63,896	0/0:15,0:15:39.06:0,39,500	0/0:25,0:25:72.21:0,72,996	0/0:31,0:31:90.29:0,90,1277	0/0:44,0:44:99:0,126,1810	0/0:14,0:14:42.14:0,42,600
chr10	59951683	.	AGGG	A	6245.25	PASS	AB=0.979;AC=49;AF=0.875;AN=56;BaseQRankSum=-4.916;DP=353;FS=12.157;HRun=5;HaplotypeScore=84.5968;InbreedingCoeff=-0.1362;MQ=67.25;MQ0=8;MQRankSum=-3.005;QD=17.69;ReadPosRankSum=1.669;VQSLOD=1.0013;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:16,6:20:39.14:382,39,0	1/1:5,5:10:18.52:268,19,0	0/1:28,0:11:9.58:10,0,128	0/1:22,0:10:10.39:10,0,64	1/1:3,6:9:0.20:285,0,0	0/1:7,0:7:19.07:19,0,34	0/1:6,0:5:19.63:20,0,25	1/1:4,21:24:61.75:654,62,0	1/1:0,5:5:9.03:148,9,0	1/1:2,9:11:30.07:429,30,0	1/1:4,5:10:15.04:198,15,0	1/1:8,0:8:0.09:53,0,0	0/1:5,0:5:3.98:38,0,4	1/1:4,3:7:10.93:133,11,0	1/1:1,6:7:6.02:98,6,0	1/1:1,10:11:24.08:390,24,0	1/1:5,19:24:29.85:462,30,0	1/1:4,15:18:18.06:284,18,0	1/1:6,15:20:36.12:400,36,0	1/1:3,13:16:30.09:425,30,0	1/1:2,2:4:6.02:81,6,0	1/1:2,0:2:5.98:47,6,0	0/1:11,0:11:28.89:31,0,29	0/1:6,0:5:13.22:34,0,13	1/1:1,6:7:6.01:78,6,0	1/1:2,14:15:13.26:398,13,0	1/1:5,15:21:42.14:627,42,0	1/1:3,8:10:15.05:244,15,0
chr10	59951689	.	TG	T	2796.83	PASS	AB=1.000;AC=51;AF=0.911;AN=56;BaseQRankSum=1.321;DP=359;FS=2.726;HRun=5;HaplotypeScore=90.4851;InbreedingCoeff=0.2571;MQ=57.32;MQ0=11;MQRankSum=-1.820;QD=8.37;ReadPosRankSum=2.712;VQSLOD=0.3049;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:22:34.92:213,35,0	1/1:7,0:7:14.48:92,14,0	0/1:38,0:9:14.52:30,0,15	0/0:21,0:6:2.47:0,2,51	1/1:11,0:11:5.16:78,5,0	1/1:10,0:9:2.84:55,3,0	0/0:4,0:3:2.66:0,3,11	1/1:26,1:25:57.36:360,57,0	1/1:7,0:7:8.91:46,9,0	1/1:10,1:11:25.92:170,26,0	1/1:9,1:9:13.78:79,14,0	1/1:6,0:7:5.08:31,5,0	1/1:11,0:11:1.89:67,2,0	1/1:6,0:6:11.55:69,12,0	1/1:5,0:5:5.92:38,6,0	1/1:12,0:12:18.81:119,19,0	1/1:26,0:25:30.53:175,31,0	1/1:14,1:15:18.61:121,19,0	1/1:20,1:18:31.97:224,32,0	1/1:17,0:17:28.98:186,29,0	1/1:4,0:4:8.64:57,9,0	1/1:2,0:2:2.97:20,3,0	1/1:8,0:8:3.29:38,3,0	1/1:7,0:6:4.95:40,5,0	1/1:7,0:7:5.02:29,5,0	1/1:15,0:14:32.24:211,32,0	1/1:17,1:18:40.66:262,41,0	1/1:8,0:7:14:96,14,0
chr10	59951690	.	GGT	G	3095.68	PASS	AB=1.000;AC=44;AF=0.786;AN=56;BaseQRankSum=6.558;DP=350;FS=1.419;HRun=0;HaplotypeScore=84.3307;InbreedingCoeff=0.1015;MQ=55.36;MQ0=11;MQRankSum=-2.883;QD=9.50;ReadPosRankSum=6.299;VQSLOD=3.2337;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:21:23.70:219,24,0	1/1:6,0:6:17:125,17,0	0/1:38,0:9:22.24:22,0,52	0/0:21,0:6:4.64:0,5,71	1/1:12,0:12:9.67:111,10,0	0/1:10,0:9:1.02:1,0,52	0/0:3,0:2:3:0,3,25	1/1:26,0:24:26.83:337,27,0	1/1:7,0:7:8.39:53,8,0	1/1:10,1:11:28.18:225,28,0	0/1:10,0:9:2.89:78,0,3	0/1:8,0:8:34.72:35,0,40	0/1:11,0:11:37.15:41,0,37	1/1:5,0:5:11.79:80,12,0	1/1:5,0:5:5.99:50,6,0	1/1:12,0:12:11.53:151,12,0	1/1:25,1:25:16.72:226,17,0	1/1:15,0:15:10.50:145,10,0	1/1:19,0:16:29.39:209,29,0	1/1:13,1:15:22.16:247,22,0	1/1:3,1:4:5.98:73,6,0	1/1:2,0:2:2.76:19,3,0	0/1:7,0:7:8.53:9,0,25	0/1:7,0:6:7.12:33,0,7	0/1:7,0:7:18.52:22,0,19	1/1:14,0:13:32.85:261,33,0	1/1:15,2:17:41.61:357,42,0	1/1:8,0:7:5.99:114,6,0
chr10	59952324	.	CT	C	1651.59	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=9.524;DP=540;FS=2.269;HRun=9;HaplotypeScore=52.8084;InbreedingCoeff=0.9876;MQ=77.59;MQ0=0;MQRankSum=-3.619;QD=22.02;ReadPosRankSum=1.955;VQSLOD=4.5063;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,22:23:63.03:577,63,0	0/0:10,0:10:24.07:0,24,277	0/0:17,0:16:33.06:0,33,345	0/0:8,0:8:12.03:0,12,138	1/1:1,13:14:36.01:329,36,0	0/0:17,0:17:48.14:0,48,554	0/0:22,0:22:63.19:0,63,726	0/0:33,0:33:96.26:0,96,1091	1/1:2,20:22:51.03:467,51,0	0/0:26,0:26:69.20:0,69,796	0/0:17,0:17:48.13:0,48,546	0/0:18,0:18:51.15:0,51,588	0/0:20,0:20:60.18:0,60,689	0/0:19,0:19:45.13:0,45,519	0/0:28,0:28:78.22:0,78,890	0/0:23,0:23:66.20:0,66,762	0/0:25,0:25:63.15:0,63,713	1/1:0,16:16:48.03:439,48,0	0/0:27,0:27:75.20:0,75,841	0/0:14,0:14:39.12:0,39,450	0/0:27,0:27:75.22:0,75,865	0/0:9,0:9:24.07:0,24,276	0/0:14,0:14:30.09:0,30,346	0/0:15,0:15:42.12:0,42,485	0/0:18,0:18:48.13:0,48,545	0/0:20,0:20:48.14:0,48,549	0/0:16,1:17:17.67:0,18,457	0/0:21,0:21:57.13:0,57,626
chr10	59952559	.	ATATTTATTTATTTATT	A	1624.16	PASS	AC=18;AF=0.391;AN=46;BaseQRankSum=0.755;DP=340;FS=0.000;HRun=0;HaplotypeScore=139.8764;InbreedingCoeff=0.6785;MQ=69.02;MQ0=2;MQRankSum=-3.632;QD=17.10;ReadPosRankSum=-0.303;VQSLOD=2.2496;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:13,2:15:6.02:262,6,0	./.	./.	./.	1/1:8,9:17:14.88:209,15,0	1/1:7,6:13:12.01:414,12,0	1/1:4,0:4:6.02:114,6,0	0/0:48,0:47:27.09:0,27,1094	1/1:8,2:10:3.01:131,3,0	0/0:13,0:13:9.03:0,9,653	0/0:7,0:7:9.03:0,9,674	1/1:4,2:6:6.02:262,6,0	1/1:6,2:8:3.01:131,3,0	0/0:5,0:6:3.01:0,3,209	0/0:14,0:15:9.03:0,9,584	0/0:7,0:9:6.02:0,6,353	0/0:13,0:23:21.07:0,21,840	1/1:10,5:15:3.01:131,3,0	0/0:16,0:18:6.02:0,6,178	0/0:10,0:13:12.04:0,12,434	0/0:6,0:8:6.02:0,6,258	./.	1/1:5,2:7:3.01:131,3,0	./.	0/0:12,0:14:24.08:0,24,1338	0/0:11,0:14:12.04:0,12,646	0/0:8,0:11:12.04:0,12,531	0/0:10,0:30:48.16:0,48,2940
chr10	59954712	.	TTGTGTGTGTGTGTG	T	2683.70	PASS	AB=1.000;AC=21;AF=0.404;AN=52;BaseQRankSum=3.390;DP=540;FS=8.136;HRun=0;HaplotypeScore=187.7031;InbreedingCoeff=0.7007;MQ=69.33;MQ0=21;MQRankSum=-5.469;QD=13.42;ReadPosRankSum=0.746;VQSLOD=1.9110;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:25:38.48:0,38,1361	0/0:10,0:10:15.05:0,15,633	./.	./.	0/0:20,0:20:9:0,9,332	0/0:12,0:14:9.03:0,9,224	0/0:11,0:14:12.02:0,12,353	0/0:28,0:27:9.03:0,9,249	0/0:24,0:23:21.07:0,21,1218	1/1:12,0:15:3.01:98,3,0	1/1:7,4:11:3.01:116,3,0	0/0:17,0:19:9.03:0,9,305	0/0:8,0:8:9.03:0,9,274	1/1:11,6:17:6.02:233,6,0	1/1:12,7:19:14.82:582,15,0	1/1:9,3:13:12.04:447,12,0	0/0:15,0:19:12.04:0,12,526	0/0:17,0:24:12.51:0,13,526	0/0:21,0:17:2.80:0,3,7	1/1:15,7:22:15.01:487,15,0	0/1:28,0:28:2.73:3,0,4	0/0:13,0:12:12.04:0,12,354	0/0:12,0:14:2.99:0,3,24	0/0:10,0:10:21.07:0,21,617	1/1:24,5:30:8.99:234,9,0	1/1:18,0:18:3:98,3,0	1/1:13,7:20:8.63:330,9,0	1/1:3,3:5:6.02:233,6,0
chr10	59954872	.	G	GT	15090.71	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=-13.317;DP=595;FS=2.207;HRun=1;HaplotypeScore=53.7717;InbreedingCoeff=0.9998;MQ=74.55;MQ0=0;MQRankSum=-2.274;QD=41.57;ReadPosRankSum=3.167;VQSLOD=5.3387;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,30:30:87.29:1303,87,0	0/0:12,0:12:36.12:0,36,467	0/0:19,0:19:49.61:0,50,597	0/0:12,0:12:27.43:0,27,404	1/1:0,29:29:84.28:1252,84,0	0/0:15,0:15:45.10:0,45,539	0/0:22,0:22:63.17:0,63,788	0/0:24,0:24:69.21:0,69,872	1/1:1,20:21:57.19:854,57,0	1/1:0,27:27:81.27:1214,81,0	1/1:1,20:21:57.10:826,57,0	0/0:23,0:23:63.20:0,63,814	0/0:14,0:14:39.13:0,39,506	1/1:1,18:19:45.15:674,45,0	1/1:0,26:26:72.24:1078,72,0	1/1:0,22:22:63.21:944,63,0	0/0:25,0:25:75.24:0,75,969	1/1:0,17:17:48.16:713,48,0	1/1:1,13:14:39.13:584,39,0	1/1:0,32:32:93.27:1367,93,0	1/1:1,16:17:42.14:623,42,0	0/0:17,0:17:51.14:0,51,645	0/0:22,0:22:63.20:0,63,818	0/0:27,0:27:69.20:0,69,879	1/1:2,19:21:57.15:829,57,0	1/1:1,31:32:93.30:1373,93,0	1/1:1,22:23:63.21:944,63,0	1/1:0,12:12:36.07:513,36,0
chr10	59956062	.	TG	T	2550.35	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=-0.807;DP=570;FS=0.408;HRun=1;HaplotypeScore=91.5730;InbreedingCoeff=0.8614;MQ=56.82;MQ0=12;MQRankSum=1.109;QD=14.25;ReadPosRankSum=-4.195;VQSLOD=1.5435;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:27:30.76:189,31,0	1/1:0,10:10:24.04:312,24,0	0/1:34,0:11:9.51:10,0,63	0/0:42,0:15:0.30:0,0,170	1/1:29,0:28:45.75:307,46,0	0/0:18,0:18:51:0,51,620	0/0:16,0:16:30.94:0,31,529	1/1:17,14:30:78.94:926,79,0	1/1:10,0:10:11.87:84,12,0	0/0:29,0:28:66.79:0,67,518	0/0:22,0:21:56.58:0,57,436	0/0:17,0:17:48.10:0,48,599	0/0:20,0:20:60.07:0,60,693	0/0:19,0:19:41.86:0,42,342	0/0:18,0:18:41.92:0,42,358	0/0:13,0:13:32.87:0,33,273	1/1:10,14:24:62.55:751,63,0	1/1:13,0:11:26.35:168,26,0	0/0:7,0:6:16.88:0,17,118	0/0:32,0:30:74.32:0,74,577	0/0:9,0:9:17.84:0,18,142	0/0:11,0:11:33.09:0,33,411	0/0:23,0:23:66.16:0,66,807	0/0:29,0:29:77.97:0,78,946	0/0:16,0:16:44.75:0,45,361	0/0:19,0:19:54.45:0,54,410	0/0:22,0:22:41.04:0,41,338	0/0:9,0:9:11.97:0,12,98
chr10	59956065	.	T	TTTG	9348.74	PASS	AB=0.897;AC=26;AF=0.464;AN=56;BaseQRankSum=-11.126;DP=568;FS=7.210;HRun=0;HaplotypeScore=84.2838;InbreedingCoeff=0.6699;MQ=56.81;MQ0=13;MQRankSum=0.289;QD=32.24;ReadPosRankSum=4.294;VQSLOD=5.0598;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:27:47.18:48,0,47	0/0:10,0:10:21.07:0,21,268	0/0:34,0:11:17.22:0,17,138	0/0:41,0:14:17.46:0,17,321	0/1:30,0:29:76.16:76,0,108	0/0:18,0:18:54.13:0,54,853	0/0:16,0:16:27.63:0,28,691	0/0:30,0:29:47.32:0,47,712	0/0:10,0:10:1.09:0,1,30	1/1:3,26:29:71.85:1191,72,0	1/1:3,18:21:48.04:891,48,0	0/0:17,0:17:48.16:0,48,809	0/0:18,0:18:54.17:0,54,843	1/1:0,20:20:42.14:888,42,0	1/1:1,17:18:39.13:824,39,0	1/1:0,14:14:33.01:657,33,0	0/0:24,0:24:65.82:0,66,738	0/1:13,0:11:28.21:28,0,71	1/1:0,7:6:18.05:282,18,0	1/1:1,30:29:69.06:1281,69,0	0/1:3,7:10:23.17:273,0,23	0/0:10,0:10:30.10:0,30,498	0/0:21,0:21:63.21:0,63,1024	0/0:29,0:29:84.18:0,84,1261	1/1:0,16:16:45.15:940,45,0	1/1:1,17:18:54.15:958,54,0	1/1:2,20:22:42.05:820,42,0	1/1:1,9:10:9.03:192,9,0
chr10	59958128	.	GT	G	4622.76	PASS	AB=0.721;AC=43;AF=0.768;AN=56;BaseQRankSum=-1.139;DP=571;FS=2.295;HRun=12;HaplotypeScore=106.3596;InbreedingCoeff=0.0947;MQ=61.43;MQ0=11;MQRankSum=0.630;QD=9.34;ReadPosRankSum=4.723;VQSLOD=4.1789;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:28:30.60:92,31,0	1/1:2,0:10:12.94:40,13,0	0/0:35,0:16:14.82:0,15,119	0/0:41,0:11:0.33:0,0,15	1/1:4,0:22:14.55:66,15,0	0/1:7,6:13:38.39:114,0,38	0/1:7,4:11:4.72:83,0,5	0/1:19,0:18:1.90:18,0,2	1/1:4,0:19:18.11:52,18,0	1/1:4,20:24:59.72:458,60,0	1/1:9,3:12:14.83:108,15,0	0/1:9,10:19:3.42:170,0,3	1/1:12,6:18:29.75:210,30,0	1/1:4,19:23:47.71:369,48,0	1/1:2,18:21:19.53:303,20,0	1/1:8,20:28:40.17:470,40,0	0/1:12,0:30:3.28:3,0,14	1/1:12,0:18:13.77:39,14,0	1/1:8,10:17:14.57:223,15,0	0/1:10,16:26:4.06:295,0,4	0/1:9,2:9:12.79:56,0,13	0/1:4,6:9:16.30:87,0,16	1/1:3,14:17:4.61:210,5,0	1/1:11,8:19:11.02:110,11,0	1/1:6,17:24:16.39:300,16,0	1/1:4,19:23:4.30:364,4,0	1/1:4,19:23:44.76:341,45,0	0/1:4,2:5:19.18:41,0,19
chr10	59958139	.	TTGTTTTTTG	T	3822.17	PASS	AB=0.975;AC=23;AF=0.411;AN=56;BaseQRankSum=5.189;DP=634;FS=19.342;HRun=0;HaplotypeScore=185.3349;InbreedingCoeff=-0.3987;MQ=52.41;MQ0=20;MQRankSum=-4.081;QD=7.38;ReadPosRankSum=-1.738;VQSLOD=1.3011;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:25:27.18:338,0,27	0/1:14,0:14:54.49:107,0,54	0/1:41,0:14:33.25:33,0,71	0/1:58,0:9:13.34:13,0,32	1/1:23,0:23:14.39:381,14,0	0/0:16,0:15:44.64:0,45,753	0/0:16,0:16:25.99:0,26,533	1/1:33,0:30:22.16:401,22,0	0/1:17,1:18:39.99:167,0,40	0/1:26,0:25:99:137,0,154	0/1:9,0:9:11.64:88,0,12	0/0:19,0:19:41.21:0,41,569	0/0:21,0:20:41.69:0,42,722	0/1:23,0:23:99:106,0,191	0/1:25,0:25:99:177,0,137	0/1:25,0:25:83.22:410,0,83	0/1:30,0:30:36.34:98,0,36	0/1:8,9:17:50.80:122,0,51	0/1:19,0:16:99:167,0,121	0/1:26,0:26:99:187,0,159	0/1:10,0:7:16.46:16,0,26	0/0:12,0:11:12.68:0,13,339	0/0:18,0:18:41.74:0,42,757	0/0:13,0:13:25.32:0,25,457	0/1:26,0:26:99:241,0,157	0/1:27,0:27:99:257,0,200	0/1:29,0:29:63.94:285,0,64	0/1:11,0:8:89.40:89,0,107
chr10	59958148	.	GTTTTTTT	G	6421.32	PASS	AB=0.900;AC=31;AF=0.554;AN=56;BaseQRankSum=0.592;DP=654;FS=4.438;HRun=20;HaplotypeScore=159.4366;InbreedingCoeff=0.7646;MQ=51.30;MQ0=29;MQRankSum=-0.803;QD=15.44;ReadPosRankSum=1.403;VQSLOD=-0.3420;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:22,8:27:29.25:463,29,0	0/0:14,0:14:31.17:0,31,355	0/0:49,0:9:9.98:0,10,59	0/1:62,0:9:11.25:11,0,25	1/1:17,5:23:37.77:509,38,0	0/0:16,0:16:42.09:0,42,846	0/0:18,0:18:48.05:0,48,779	0/0:31,0:28:53.85:0,54,552	1/1:17,1:18:13.73:248,14,0	1/1:26,2:27:21.10:470,21,0	1/1:11,0:12:28.28:273,28,0	0/0:17,0:18:30.10:0,30,578	0/0:18,0:17:39.12:0,39,749	0/1:21,3:24:9.69:299,0,10	1/1:16,4:22:31.98:471,32,0	1/1:16,10:27:60.69:850,61,0	0/0:26,0:26:25.22:0,25,281	1/1:15,1:16:10.84:120,11,0	1/1:15,4:15:17.21:285,17,0	1/1:19,6:28:51.42:663,51,0	1/1:10,0:6:6.75:92,7,0	0/0:9,0:8:21.07:0,21,418	0/0:15,0:19:36.59:0,37,677	0/0:15,0:15:29.99:0,30,553	1/1:19,3:25:22.28:473,22,0	1/1:22,3:28:39.94:471,40,0	1/1:20,5:25:37.58:533,38,0	0/1:11,2:8:53.48:188,0,53
chr10	59960028	.	C	CT	2947.54	PASS	AB=0.960;AC=40;AF=0.714;AN=56;BaseQRankSum=2.097;DP=632;FS=0.000;HRun=14;HaplotypeScore=83.0709;InbreedingCoeff=0.5750;MQ=63.56;MQ0=28;MQRankSum=-3.650;QD=5.92;ReadPosRankSum=-0.328;VQSLOD=2.4662;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:30,4:31:16.66:275,17,0	1/1:8,0:10:9.61:42,10,0	0/1:44,0:15:6.11:6,0,13	0/0:42,0:17:8.25:0,8,70	1/1:19,3:22:25.51:178,26,0	0/1:15,1:16:30.25:30,0,75	0/0:10,0:9:11.14:0,11,61	1/1:32,0:29:14.10:81,14,0	1/1:14,0:14:10.84:57,11,0	1/1:22,2:22:28.14:216,28,0	1/1:10,6:17:27.89:219,28,0	0/1:16,0:16:25.54:26,0,35	0/0:21,0:21:23.98:0,24,142	1/1:15,0:14:10.79:48,11,0	1/1:17,1:17:1.96:75,2,0	1/1:7,4:17:14.58:105,15,0	1/1:28,0:26:10.51:33,11,0	1/1:18,1:19:23.55:184,24,0	1/1:21,5:24:41.54:254,42,0	0/1:30,4:32:10.34:228,0,10	1/1:5,0:5:0.47:2,0,0	0/0:9,0:12:16.10:0,16,85	0/0:33,0:32:38.39:0,38,320	0/0:16,0:13:29.40:0,29,191	1/1:14,2:16:17.62:189,18,0	1/1:27,5:31:37.51:386,38,0	1/1:23,3:26:34.14:225,34,0	1/1:23,2:26:16.99:278,17,0
chr10	59960043	.	C	CT	2263.78	PASS	AB=0.879;AC=35;AF=0.625;AN=56;BaseQRankSum=4.079;DP=575;FS=29.925;HRun=14;HaplotypeScore=81.9277;InbreedingCoeff=0.5379;MQ=50.30;MQ0=46;MQRankSum=-3.466;QD=5.04;ReadPosRankSum=-2.005;VQSLOD=-0.2431;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:33,3:31:0.86:300,0,1	1/1:6,0:7:8.14:41,8,0	0/1:25,0:3:0:0,0,0	0/1:30,0:10:0.37:0,0,0	1/1:13,9:21:17.80:115,18,0	0/0:15,0:15:14.07:0,14,91	0/0:13,0:11:14.91:0,15,112	1/1:29,0:27:10.93:67,11,0	1/1:7,5:11:5.74:48,6,0	1/1:13,12:24:9.22:225,9,0	1/1:8,8:13:21.43:195,21,0	0/0:14,4:18:20:0,20,147	0/0:15,0:15:11.69:0,12,92	1/1:10,4:12:2.92:17,3,0	0/1:9,10:16:10.59:80,0,11	0/1:14,4:16:1.06:131,0,1	1/1:20,0:23:3.73:17,4,0	1/1:12,6:16:8:55,8,0	1/1:16,4:18:15.02:148,15,0	0/1:22,10:31:0.03:178,0,0	0/1:4,0:3:0:0,0,0	0/0:14,0:11:5.95:0,6,46	0/0:29,0:28:1.04:0,1,138	0/0:21,0:17:32.71:0,33,255	1/1:11,5:15:15.31:128,15,0	1/1:14,9:23:26.20:234,26,0	1/1:21,5:26:4.04:181,4,0	1/1:18,4:22:32.71:270,33,0
chr10	59962114	.	CGT	C	884.17	PASS	AB=0.929;AC=34;AF=0.850;AN=40;BaseQRankSum=2.474;DP=519;FS=3.696;HRun=0;HaplotypeScore=117.2630;InbreedingCoeff=0.0587;MQ=64.05;MQ0=6;MQRankSum=0.509;QD=2.47;ReadPosRankSum=2.220;VQSLOD=2.2654;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:0:0,0,0	1/1:13,0:13:8.23:42,8,0	./.	./.	./.	0/1:10,2:12:25.97:26,0,37	1/1:13,0:15:6.44:46,6,0	./.	1/1:22,0:22:14.15:72,14,0	1/1:24,0:24:2.94:18,3,0	./.	0/1:7,0:7:11.18:56,0,11	1/1:12,6:18:6.02:64,6,0	./.	1/1:23,0:23:12.71:63,13,0	1/1:14,0:14:8.72:49,9,0	1/1:30,0:30:8.15:41,8,0	1/1:24,0:24:2.81:17,3,0	./.	0/0:12,0:12:0:0,0,0	1/1:35,0:35:8.68:66,9,0	1/1:13,0:13:11.90:83,12,0	1/1:12,0:12:5.85:46,6,0	1/1:30,4:34:23.01:199,23,0	1/1:20,0:20:8.66:47,9,0	1/1:23,0:23:2.05:16,2,0	1/1:18,0:18:5.68:28,6,0	./.
chr10	59962148	.	TGTGTGTGTGTGTGTGTGCGC	T	1904.94	PASS	AB=0.949;AC=11;AF=0.196;AN=56;BaseQRankSum=-1.748;DP=493;FS=4.313;HRun=0;HaplotypeScore=197.4584;InbreedingCoeff=-0.0557;MQ=54.92;MQ0=15;MQRankSum=1.337;QD=11.76;ReadPosRankSum=-2.947;VQSLOD=1.8671;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:12.50:0,12,378	1/1:2,7:9:8.75:493,9,0	0/1:8,0:4:2.35:2,0,12	0/0:12,0:1:3.01:0,3,67	0/0:17,0:16:12.50:0,12,356	0/0:16,0:16:39.13:0,39,2032	0/0:19,0:17:39.13:0,39,1493	0/1:17,0:17:18.59:548,0,19	0/0:18,0:18:30.07:0,30,934	0/1:18,0:18:48.37:48,0,1257	0/0:10,0:10:6.02:0,6,114	0/0:18,0:18:37.07:0,37,1960	0/0:20,0:20:39.13:0,39,2036	0/0:23,0:23:18.52:0,19,668	0/0:20,0:20:30.09:0,30,1124	0/0:20,0:20:18.67:0,19,672	0/1:5,27:31:52.50:502,0,53	0/0:19,0:18:21.05:0,21,831	0/1:6,0:5:32.18:32,0,477	0/0:8,0:8:2.96:0,3,19	0/1:46,0:44:99:258,0,3253	0/0:16,0:16:36.11:0,36,1795	0/0:11,0:10:27.08:0,27,1124	0/0:36,0:35:84.29:0,84,4758	0/0:18,0:18:20.76:0,21,903	0/1:11,0:11:13.53:14,0,956	0/1:11,0:11:71.42:71,0,487	0/1:4,0:4:81.46:81,0,203
chr10	59962160	.	TGTGTGCGC	T	4863.32	PASS	AB=1.000;AC=30;AF=0.536;AN=56;BaseQRankSum=3.702;DP=458;FS=2.405;HRun=0;HaplotypeScore=104.7091;InbreedingCoeff=0.5873;MQ=61.90;MQ0=10;MQRankSum=-0.643;QD=18.35;ReadPosRankSum=-0.540;VQSLOD=3.8050;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:5,19:24:0:0,0,0	1/1:8,0:8:8.91:204,9,0	0/1:9,0:5:5.05:5,0,9	0/0:11,0:5:6.93:0,7,37	0/0:4,10:13:0.47:0,0,1	0/0:16,0:16:39.13:0,39,836	0/0:19,0:17:16.05:0,16,642	1/1:17,0:17:48.11:738,48,0	1/1:2,13:15:14.94:414,15,0	1/1:17,0:17:25.90:396,26,0	0/0:7,0:7:0.47:0,0,1	0/1:20,0:20:9.92:10,0,483	0/0:24,0:24:51.13:0,51,894	0/0:21,0:21:0:0,0,0	1/1:5,13:18:14.78:304,15,0	0/1:25,0:25:9.51:116,0,10	1/1:29,0:28:9.92:206,10,0	1/1:2,13:14:2.95:85,3,0	1/1:5,0:5:1.05:183,1,0	0/1:7,0:7:0.11:0,0,0	1/1:40,0:38:43.40:1166,43,0	0/0:12,0:12:24.91:0,25,545	0/0:9,0:9:24:0,24,342	0/0:36,0:35:64.45:0,64,1509	1/1:15,1:17:8.90:141,9,0	1/1:11,0:11:19.44:349,19,0	1/1:6,2:8:20.28:366,20,0	1/1:4,0:4:12.04:182,12,0
chr10	59962162	.	TGTGCGC	T	5181.59	PASS	AB=0.767;AC=32;AF=0.571;AN=56;BaseQRankSum=3.923;DP=449;FS=3.116;HRun=0;HaplotypeScore=90.6407;InbreedingCoeff=0.6375;MQ=65.96;MQ0=9;MQRankSum=0.670;QD=19.19;ReadPosRankSum=-1.140;VQSLOD=3.6442;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:0:0,0,0	1/1:8,0:8:9.42:162,9,0	0/1:11,0:7:5.47:5,0,9	0/0:12,0:6:9.30:0,9,45	0/0:12,0:11:0.47:0,0,1	0/0:16,0:16:36.12:0,36,666	0/0:21,0:19:26.49:0,26,710	1/1:18,0:18:51.12:787,51,0	1/1:14,0:14:15.05:271,15,0	1/1:3,12:15:28.88:445,29,0	0/0:7,0:7:0.47:0,0,1	0/0:21,0:21:0.62:0,1,448	0/0:24,0:24:51.12:0,51,743	0/1:1,18:19:0:0,0,0	1/1:13,2:15:15.05:295,15,0	1/1:3,22:25:8.87:202,9,0	1/1:29,0:28:9.50:163,10,0	1/1:15,0:14:2.97:53,3,0	1/1:7,0:7:21.06:319,21,0	0/1:1,4:5:0:0,0,0	1/1:39,0:38:90.22:1346,90,0	0/1:12,0:12:13.93:14,0,389	0/0:9,0:9:23.99:0,24,288	0/0:36,0:35:60.79:0,61,1222	1/1:2,15:17:8.91:195,9,0	1/1:1,8:9:23.21:399,23,0	1/1:8,0:8:21.07:343,21,0	1/1:4,0:4:12.04:182,12,0
chr10	59962164	.	TGCGC	T	4707.64	PASS	AB=1.000;AC=31;AF=0.574;AN=54;BaseQRankSum=3.684;DP=445;FS=1.083;HRun=0;HaplotypeScore=81.9562;InbreedingCoeff=0.7655;MQ=67.32;MQ0=9;MQRankSum=-1.218;QD=18.61;ReadPosRankSum=0.100;VQSLOD=4.3761;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	1/1:8,0:8:9.03:120,9,0	0/1:12,0:8:3.90:4,0,12	0/0:11,0:6:9.30:0,9,45	0/0:12,0:11:0.47:0,0,1	0/0:16,0:16:38.72:0,39,602	0/0:22,0:20:46.87:0,47,726	1/1:1,17:18:51.12:787,51,0	1/1:14,0:14:15.05:202,15,0	1/1:15,0:15:29.78:414,30,0	0/0:1,6:7:0.47:0,0,1	0/0:20,0:20:36.38:0,36,453	0/0:26,0:26:57.14:0,57,727	0/1:18,0:18:0:0,0,0	1/1:15,0:15:15.05:201,15,0	1/1:24,0:24:8.87:124,9,0	1/1:29,0:28:9.03:120,9,0	1/1:14,0:14:2.69:38,3,0	1/1:0,7:7:21.07:340,21,0	0/1:5,0:5:0:0,0,0	1/1:37,0:36:87.28:1373,87,0	0/0:12,0:12:24.08:0,24,352	0/0:10,0:10:20.17:0,20,268	0/0:34,0:33:76.50:0,76,1118	1/1:17,0:17:9.02:118,9,0	1/1:8,0:8:24.08:369,24,0	1/1:8,0:8:21.07:315,21,0	1/1:4,0:4:12.04:182,12,0
chr10	59965239	.	T	TTC	20897.16	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-1.996;DP=581;FS=11.908;HRun=0;HaplotypeScore=82.5019;InbreedingCoeff=0.9983;MQ=69.45;MQ0=2;MQRankSum=-6.198;QD=48.49;ReadPosRankSum=0.967;VQSLOD=5.2956;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,32:33:90.31:1668,90,0	1/1:1,6:7:18.06:335,18,0	0/0:11,0:11:27.04:0,27,319	0/0:12,0:12:30.04:0,30,390	1/1:6,28:34:99:1741,99,0	0/0:18,0:18:45.10:0,45,634	0/0:23,0:23:66.17:0,66,963	1/1:2,36:38:99:1872,111,0	1/1:0,18:18:51.17:949,51,0	1/1:7,17:24:66.22:1217,66,0	1/1:5,13:18:54.18:924,54,0	0/0:13,0:13:39.12:0,39,576	0/0:13,0:13:36.08:0,36,525	1/1:7,14:21:60.15:971,60,0	1/1:1,19:20:54.18:981,54,0	1/1:5,15:20:54.13:939,54,0	1/1:2,15:17:45.15:781,45,0	1/1:3,20:22:54.14:944,54,0	1/1:7,11:18:51.09:834,51,0	1/1:2,16:18:51.17:926,51,0	1/1:0,15:15:36.12:670,36,0	0/0:25,0:25:72.22:0,72,1046	0/0:12,0:12:33.11:0,33,482	0/0:23,0:23:57.18:0,57,844	1/1:6,20:26:75.23:1314,75,0	1/1:3,35:39:99:1938,114,0	1/1:7,20:27:78.23:1334,78,0	1/1:1,13:14:30.10:559,30,0
chr10	59965283	.	GT	G	7897.40	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=10.247;DP=490;FS=0.811;HRun=8;HaplotypeScore=98.0773;InbreedingCoeff=0.9839;MQ=72.36;MQ0=0;MQRankSum=-8.140;QD=23.16;ReadPosRankSum=1.890;VQSLOD=5.0297;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,24:27:69.09:660,69,0	1/1:0,10:10:27.04:261,27,0	0/0:14,0:14:35.77:0,36,391	0/0:10,0:10:11.98:0,12,130	1/1:1,27:28:72.12:700,72,0	0/0:18,0:18:42.13:0,42,507	0/0:23,0:24:63.06:0,63,739	1/1:9,17:26:60.09:579,60,0	1/1:3,7:10:21.03:203,21,0	1/1:5,14:19:45.06:431,45,0	1/1:3,15:19:31.85:369,32,0	0/0:10,0:10:24.07:0,24,290	0/0:15,0:15:42:0,42,448	1/1:2,14:16:42.06:405,42,0	1/1:4,13:17:39.06:378,39,0	1/1:1,19:20:54.08:522,54,0	1/1:6,9:15:27.02:255,27,0	1/1:4,13:16:35.09:325,35,0	1/1:4,12:16:36.06:348,36,0	1/1:2,13:15:39.06:377,39,0	1/1:2,8:10:21.02:203,21,0	0/0:25,0:25:63.19:0,63,761	0/0:17,0:17:48.14:0,48,578	0/0:16,0:16:45.08:0,45,515	1/1:2,22:24:63.09:608,63,0	1/1:3,18:21:54.08:521,54,0	1/1:1,24:25:69.11:667,69,0	1/1:4,2:6:9.01:87,9,0
chr10	59965341	.	C	CT	2354.61	PASS	AB=0.873;AC=44;AF=0.786;AN=56;BaseQRankSum=0.652;DP=515;FS=15.924;HRun=16;HaplotypeScore=125.4799;InbreedingCoeff=0.0339;MQ=51.45;MQ0=22;MQRankSum=-1.680;QD=4.78;ReadPosRankSum=-0.956;VQSLOD=0.3887;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:28,1:27:4.43:4,0,47	1/1:8,0:12:13.99:70,14,0	0/1:29,0:11:16.29:16,0,23	0/0:9,0:5:0.44:0,0,2	1/1:23,0:23:1.95:7,2,0	0/1:14,8:22:16.76:79,0,17	0/1:10,5:14:29.58:54,0,30	1/1:22,0:26:25.97:157,26,0	0/0:13,0:12:5.36:0,5,26	1/1:13,0:14:17.18:101,17,0	0/1:17,0:19:5.61:58,0,6	1/1:4,6:9:20.85:158,21,0	1/1:9,4:13:9.77:139,10,0	1/1:16,0:16:6.03:46,6,0	1/1:12,1:15:15.65:108,16,0	1/1:23,1:25:21.75:185,22,0	1/1:13,1:18:13.63:112,14,0	0/1:21,0:16:8.70:28,0,9	1/1:11,3:13:17.53:113,18,0	1/1:13,1:16:18.99:128,19,0	1/1:6,0:4:5.50:26,5,0	1/1:8,5:14:4.41:102,4,0	1/1:8,9:18:1.04:93,1,0	0/1:10,11:22:11.31:187,0,11	1/1:16,2:26:17.57:143,18,0	1/1:26,0:25:38.36:223,38,0	1/1:22,0:25:18.88:144,19,0	0/1:7,0:6:10.58:13,0,11
chr10	59965356	.	TTG	T	979.10	PASS	AB=0.997;AC=20;AF=0.357;AN=56;BaseQRankSum=-1.248;DP=510;FS=13.187;HRun=0;HaplotypeScore=102.2178;InbreedingCoeff=0.0049;MQ=46.44;MQ0=35;MQRankSum=1.247;QD=3.10;ReadPosRankSum=-4.241;VQSLOD=-0.0918;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:30,3:29:9.50:253,10,0	0/0:8,0:8:15.46:0,15,175	0/1:18,0:7:9.53:10,0,82	0/0:9,0:5:6.68:0,7,23	1/1:20,0:19:10.90:190,11,0	0/0:24,0:22:46.24:0,46,556	0/0:12,0:10:27.04:0,27,355	0/0:21,0:21:46.80:0,47,531	1/1:14,0:11:12.41:105,12,0	0/1:17,0:17:52.28:52,0,76	0/1:19,0:18:56.60:57,0,70	0/0:12,0:11:26.88:0,27,242	0/0:15,0:14:35.99:0,36,355	0/1:16,0:16:23.59:24,0,72	0/0:15,0:15:2.64:0,3,117	0/1:25,0:23:70.91:71,0,167	0/0:21,0:16:20.19:0,20,290	0/1:24,1:19:35.63:127,0,36	0/1:15,0:10:25.06:26,0,25	0/1:17,0:16:41.92:42,0,55	1/1:6,0:4:7.14:48,7,0	0/0:15,0:15:37.04:0,37,362	0/0:15,0:15:32.98:0,33,362	0/0:27,0:25:65.96:0,66,723	0/1:27,0:27:20.68:21,0,220	0/1:28,0:25:45.62:46,0,147	0/1:27,0:26:70.56:71,0,135	0/1:9,0:7:13.75:14,0,71
chr10	59965357	.	TG	T	2892.60	PASS	AB=0.988;AC=33;AF=0.589;AN=56;BaseQRankSum=3.323;DP=486;FS=10.812;HRun=2;HaplotypeScore=85.6029;InbreedingCoeff=0.6434;MQ=46.75;MQ0=35;MQRankSum=-0.638;QD=8.51;ReadPosRankSum=-2.119;VQSLOD=-0.3825;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:25,6:29:61.95:467,62,0	0/1:7,0:7:5.33:5,0,84	0/1:15,0:7:3.20:3,0,29	0/0:8,0:5:4.04:0,4,12	1/1:12,8:19:47.56:445,48,0	0/0:21,0:19:19.64:0,20,313	0/0:12,0:10:26.72:0,27,233	0/0:22,0:22:12.43:0,12,338	1/1:8,6:11:31.88:267,32,0	1/1:15,0:15:20.92:132,21,0	1/1:18,1:18:33.18:209,33,0	0/0:12,0:11:20.75:0,21,139	0/0:15,0:14:31.65:0,32,238	1/1:15,0:15:27:139,27,0	1/1:15,0:15:16.43:81,16,0	0/1:23,0:21:10.04:160,0,10	0/1:21,0:16:16.73:17,0,143	1/1:22,2:18:14.65:233,15,0	1/1:15,0:11:21.33:119,21,0	1/1:16,0:15:29.92:174,30,0	1/1:6,0:4:10.17:68,10,0	0/0:14,0:14:31.50:0,31,229	0/0:15,0:15:35.71:0,36,287	0/0:26,0:24:62.52:0,63,500	1/1:22,0:22:29.06:155,29,0	1/1:25,0:22:38.49:188,38,0	1/1:25,0:24:35.67:200,36,0	0/1:8,0:6:24.28:38,0,24
chr10	59968245	.	GAC	G	1517.57	PASS	AB=0.860;AC=20;AF=0.400;AN=50;BaseQRankSum=4.420;DP=669;FS=14.863;HRun=0;HaplotypeScore=120.9401;InbreedingCoeff=0.5932;MQ=54.49;MQ0=22;MQRankSum=0.682;QD=5.03;ReadPosRankSum=3.598;VQSLOD=2.2060;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:30,12:42:29.74:285,30,0	1/1:9,0:13:8.85:76,9,0	./.	./.	./.	1/1:10,10:19:8.86:80,9,0	1/1:28,7:33:21.37:274,21,0	0/1:18,0:18:9.81:10,0,12	0/1:21,0:33:27.55:115,0,28	0/0:20,0:20:18.47:0,18,179	0/0:20,0:20:14.72:0,15,273	0/1:22,4:26:4.89:188,0,5	1/1:16,8:23:14.85:247,15,0	0/0:17,0:22:14.95:0,15,168	0/0:20,0:23:22.02:0,22,179	0/0:17,0:29:14.25:0,14,137	0/1:22,0:24:14.02:14,0,28	0/0:13,0:11:3.22:0,3,13	0/0:16,0:16:9.65:0,10,58	0/0:24,0:27:21.32:0,21,153	0/0:35,0:49:21:0,21,227	1/1:10,6:15:8.45:152,8,0	1/1:13,0:15:2.84:14,3,0	1/1:23,4:24:18.37:246,18,0	0/0:18,0:18:16.24:0,16,181	0/0:26,0:25:25.04:0,25,269	0/0:22,0:22:30.05:0,30,357	0/0:13,0:13:30.51:0,31,355
chr10	59969141	.	AGT	A	11789.35	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=9.510;DP=802;FS=7.689;HRun=0;HaplotypeScore=108.1290;InbreedingCoeff=0.9730;MQ=72.71;MQ0=8;MQRankSum=-1.393;QD=22.85;ReadPosRankSum=2.884;VQSLOD=5.1773;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:15,38:53:99:1216,102,0	1/1:2,5:7:16.29:180,16,0	0/0:52,0:38:43.67:0,44,717	0/0:48,0:38:58.60:0,59,772	1/1:4,23:28:50.77:558,51,0	0/0:26,0:26:60.17:0,60,906	0/0:27,0:27:63.11:0,63,947	1/1:11,29:40:81.24:965,81,0	1/1:4,20:26:59.85:672,60,0	1/1:10,17:27:47.88:548,48,0	1/1:2,16:18:48.11:553,48,0	0/0:24,0:24:51.16:0,51,785	0/0:26,3:29:6.69:0,7,1010	1/1:10,21:32:46:693,46,0	1/1:5,25:33:74.72:829,75,0	1/1:5,23:28:18.43:703,18,0	1/1:5,26:31:63.02:729,63,0	1/1:6,15:18:30.09:358,30,0	1/1:9,11:21:38.90:407,39,0	1/1:9,18:28:50.91:553,51,0	1/1:5,23:29:60.02:694,60,0	0/0:18,1:19:12.39:0,12,675	0/0:21,0:21:45.15:0,45,693	0/0:39,0:39:93.27:0,93,1431	1/1:5,14:20:38.95:441,39,0	1/1:12,25:37:75.20:871,75,0	1/1:6,23:29:57.01:679,57,0	1/1:0,7:7:12.04:141,12,0
chr10	59969425	.	GTC	G	3481.67	PASS	AB=0.855;AC=30;AF=0.536;AN=56;BaseQRankSum=8.318;DP=608;FS=5.845;HRun=0;HaplotypeScore=132.2090;InbreedingCoeff=0.6924;MQ=61.14;MQ0=22;MQRankSum=-7.968;QD=10.46;ReadPosRankSum=-0.144;VQSLOD=3.2361;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:10,13:20:6.02:66,6,0	0/1:9,0:9:6.31:13,0,6	0/0:31,0:24:44.48:0,44,539	0/0:37,0:29:34.96:0,35,550	1/1:21,0:19:9.02:91,9,0	0/0:28,0:28:45.03:0,45,749	0/0:22,0:20:36.12:0,36,590	0/0:44,0:44:46.16:0,46,356	1/1:10,12:21:10.34:128,10,0	0/1:16,8:22:33.07:396,0,33	1/1:6,11:15:11.88:91,12,0	0/0:18,0:17:36.10:0,36,601	0/0:13,0:12:20.72:0,21,325	1/1:6,9:14:23.95:232,24,0	1/1:13,10:22:30:307,30,0	1/1:7,15:20:17.80:203,18,0	0/0:20,0:19:3.37:0,3,17	1/1:5,4:7:8.61:82,9,0	1/1:15,2:16:1.25:254,1,0	1/1:9,13:22:26.76:272,27,0	1/1:13,3:15:11.98:126,12,0	0/0:19,0:18:37.68:0,38,589	0/0:16,0:16:24.07:0,24,369	0/0:26,0:23:49.03:0,49,774	1/1:14,8:22:23.90:249,24,0	1/1:9,21:29:20.70:601,21,0	0/1:23,9:30:0.36:341,0,0	0/1:7,1:8:0.85:30,0,1
chr10	59969429	.	CTCTCTCTCTG	C	1875.58	PASS	AB=1.000;AC=27;AF=0.482;AN=56;BaseQRankSum=9.090;DP=627;FS=4.771;HRun=0;HaplotypeScore=204.8138;InbreedingCoeff=0.4396;MQ=55.36;MQ0=25;MQRankSum=-5.394;QD=5.14;ReadPosRankSum=-0.446;VQSLOD=2.4475;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:21:1.77:0,2,4	1/1:9,0:9:6:84,6,0	0/0:29,0:22:36.66:0,37,473	0/0:34,0:26:5.21:0,5,371	0/0:25,0:23:1.58:0,2,5	0/0:29,0:29:45.12:0,45,994	0/0:23,0:21:38.47:0,38,782	1/1:11,34:45:90.48:1089,90,0	0/1:23,0:21:8.85:9,0,72	0/1:24,0:22:19.36:19,0,236	1/1:17,0:15:7.46:27,7,0	0/0:19,0:18:36.17:0,36,807	0/0:13,0:12:7.60:0,8,335	1/1:16,0:15:18.69:96,19,0	1/1:23,0:22:24.92:114,25,0	1/1:24,0:22:16.89:98,17,0	1/1:20,0:18:6.47:83,6,0	1/1:9,0:7:11.06:52,11,0	0/1:20,0:18:27.79:28,0,83	1/1:26,0:25:9.36:81,9,0	0/1:14,0:13:0.04:24,0,0	0/0:23,0:22:39.11:0,39,748	0/0:16,0:16:21.05:0,21,428	0/0:26,0:23:27.16:0,27,939	1/1:23,0:23:21.08:103,21,0	0/1:33,0:32:96.63:97,0,362	0/1:33,0:31:50.99:51,0,114	0/1:6,0:6:3.44:11,0,3
chr10	59969433	.	CTCTCTG	C	1766.39	PASS	AB=1.000;AC=34;AF=0.607;AN=56;BaseQRankSum=10.516;DP=618;FS=6.373;HRun=0;HaplotypeScore=172.9191;InbreedingCoeff=0.5589;MQ=48.86;MQ0=29;MQRankSum=-6.067;QD=4.30;ReadPosRankSum=-2.183;VQSLOD=1.9457;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:19:5.74:30,6,0	1/1:9,0:9:5.87:39,6,0	0/0:26,0:19:22.71:0,23,426	0/0:27,0:20:5.67:0,6,340	1/1:5,20:22:8.57:45,9,0	0/0:29,0:28:30.63:0,31,999	0/0:24,0:21:36.15:0,36,772	1/1:42,0:42:60.33:364,60,0	0/1:21,0:19:7:85,0,7	0/1:25,0:23:87.20:143,0,87	1/1:17,0:15:8.44:32,8,0	0/0:20,0:19:13.58:0,14,804	0/0:13,0:12:6.07:0,6,348	1/1:17,0:16:19.14:97,19,0	1/1:23,0:22:26.77:138,27,0	1/1:24,0:22:17.78:99,18,0	1/1:16,0:14:8.63:54,9,0	1/1:9,0:7:11.92:110,12,0	0/1:22,0:20:13.82:122,0,14	1/1:28,0:27:11.52:105,12,0	1/1:12,0:11:10.46:51,10,0	0/0:25,0:24:38.97:0,39,695	0/0:15,0:15:21.05:0,21,440	0/0:27,0:23:27.16:0,27,964	1/1:25,0:25:21.79:117,22,0	0/1:36,0:35:99:178,0,151	1/1:31,0:29:0.51:126,1,0	1/1:6,0:6:5.52:30,6,0
chr10	59969439	.	GTC	G	1910.76	PASS	AB=0.894;AC=26;AF=0.481;AN=54;BaseQRankSum=10.912;DP=626;FS=6.729;HRun=0;HaplotypeScore=147.5223;InbreedingCoeff=0.3021;MQ=46.45;MQ0=33;MQRankSum=-6.747;QD=4.92;ReadPosRankSum=0.065;VQSLOD=2.0945;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:21:6.66:7,0,12	1/1:8,0:8:2.22:7,2,0	0/1:23,0:17:10.77:11,0,82	0/0:23,0:15:6.88:0,7,60	./.	0/0:29,0:28:42.02:0,42,618	0/0:27,0:22:27.09:0,27,425	0/1:35,0:35:85.43:85,0,140	0/0:21,0:19:4.25:0,4,19	0/1:20,7:25:60.92:229,0,61	1/1:12,7:17:11.77:79,12,0	0/0:22,0:21:36.04:0,36,503	0/0:12,0:11:18.29:0,18,212	1/1:11,8:18:20.59:163,21,0	1/1:14,10:23:29.83:272,30,0	1/1:17,7:22:20.47:189,20,0	1/1:16,0:14:2.22:7,2,0	0/0:9,0:7:0.73:0,1,1	0/1:22,2:22:20.03:20,0,64	1/1:19,8:25:12.72:192,13,0	1/1:8,3:10:5.95:48,6,0	0/0:23,0:22:24.55:0,25,351	0/0:16,0:16:13.94:0,14,231	0/0:26,0:22:40.01:0,40,591	1/1:11,16:27:23.73:219,24,0	0/1:30,11:40:99:276,0,225	0/1:21,9:27:32.91:263,0,33	0/1:6,1:7:8.55:24,0,9
chr10	59969441	.	C	CTG	710.94	PASS	AB=0.864;AC=7;AF=0.125;AN=56;BaseQRankSum=5.475;DP=650;FS=2.242;HRun=0;HaplotypeScore=171.8248;InbreedingCoeff=0.3959;MQ=45.15;MQ0=35;MQRankSum=-1.844;QD=5.92;ReadPosRankSum=-0.226;VQSLOD=2.8940;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:21:7.13:0,7,39	1/1:2,6:8:2.72:57,3,0	0/0:22,0:17:25.71:0,26,306	0/0:20,0:13:23.54:0,24,244	0/0:31,0:28:8.62:0,9,51	0/0:30,0:29:45.29:0,45,660	0/0:27,0:22:35.92:0,36,478	1/1:44,0:44:38.19:694,38,0	0/0:21,0:19:17.61:0,18,126	0/1:31,0:29:31.77:32,0,280	0/1:21,0:19:1.50:1,0,3	0/0:23,0:22:39.02:0,39,552	0/0:13,0:11:23.80:0,24,265	0/0:17,0:17:10.07:0,10,40	0/0:28,0:27:5.14:0,5,22	0/0:24,0:22:7.21:0,7,19	0/1:5,11:14:13.17:52,0,13	0/0:9,0:6:11.28:0,11,69	0/0:22,0:20:39.98:0,40,348	0/0:28,0:26:11.32:0,11,68	0/0:13,0:12:2.85:0,3,25	0/0:22,0:21:36.07:0,36,456	0/0:17,0:17:21.03:0,21,276	0/0:27,0:23:48.12:0,48,672	0/0:27,0:27:10.78:0,11,33	0/0:43,0:42:35.69:0,36,627	0/0:31,0:28:26.92:0,27,170	0/0:7,0:7:10.87:0,11,64
chr10	59971324	.	TGGC	T	3228.29	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=12.650;DP=840;FS=4.283;HRun=0;HaplotypeScore=127.0173;InbreedingCoeff=0.9999;MQ=86.08;MQ0=0;MQRankSum=-4.634;QD=42.48;ReadPosRankSum=0.532;VQSLOD=5.2543;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:61,0:61:99:0,181,4220	1/1:0,12:12:36.12:634,36,0	0/0:25,0:25:69.22:0,69,1514	0/0:32,0:32:81.14:0,81,1652	0/0:22,0:22:66.05:0,66,1384	0/0:25,0:25:75.26:0,75,1771	0/0:37,0:37:99:0,111,2562	1/1:3,21:24:60.15:971,60,0	0/0:28,0:28:84.27:0,84,1928	0/0:32,0:32:90.31:0,90,2113	0/0:16,0:16:48.16:0,48,1133	0/0:29,0:29:84.28:0,84,1911	0/0:30,0:30:87.28:0,87,1996	0/0:38,0:38:99:0,114,2628	0/0:39,0:39:99:0,111,2577	0/0:30,0:30:90.27:0,90,1963	1/1:1,39:40:99:1766,102,0	0/0:34,0:34:99:0,99,2295	0/0:23,0:23:69.22:0,69,1537	0/0:18,0:18:51.15:0,51,1132	0/0:63,0:63:99:0,174,3971	0/0:24,0:24:72.21:0,72,1601	0/0:26,0:26:78.26:0,78,1794	0/0:48,0:48:99:0,144,3377	0/0:21,0:21:63.20:0,63,1442	0/0:33,0:33:93.29:0,93,2062	0/0:17,0:16:51.16:0,51,1153	0/0:13,0:13:39.12:0,39,874
chr10	59972821	.	CTTTTTCT	C	1226.50	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=3.230;DP=416;FS=0.000;HRun=0;HaplotypeScore=90.4260;InbreedingCoeff=0.8229;MQ=43.99;MQ0=20;MQRankSum=-6.574;QD=27.26;ReadPosRankSum=0.234;VQSLOD=3.1469;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:29:26.79:0,27,1028	1/1:5,2:7:12:242,12,0	0/0:9,0:2:0.47:0,0,1	0/0:11,0:2:1:0,1,4	0/0:21,0:21:33.47:0,33,898	0/0:11,0:11:21.07:0,21,589	0/0:15,0:15:39.06:0,39,914	1/1:16,3:18:41.49:677,41,0	0/0:7,0:7:15.05:0,15,414	0/0:17,0:17:45.15:0,45,1189	0/0:18,0:16:27.09:0,27,600	0/0:13,0:13:33.04:0,33,770	0/0:10,0:9:15.05:0,15,320	0/0:13,0:12:10.37:0,10,459	0/0:15,0:15:39.13:0,39,923	0/0:12,0:11:24.08:0,24,719	1/1:17,2:14:27:445,27,0	0/0:20,0:20:29.14:0,29,1054	0/0:21,0:19:47.39:0,47,1059	0/0:15,0:15:45.06:0,45,995	0/0:6,0:5:9.03:0,9,208	0/0:5,0:5:6.02:0,6,80	0/0:17,0:16:27.56:0,28,618	0/0:17,0:17:37.19:0,37,966	0/0:12,0:11:24.08:0,24,738	0/0:15,0:15:36.12:0,36,876	0/0:24,0:23:48.92:0,49,1104	0/0:15,0:10:24.52:0,25,454
chr10	59972827	.	CT	C	608.84	PASS	AB=0.654;AC=5;AF=0.093;AN=54;BaseQRankSum=5.631;DP=398;FS=7.929;HRun=8;HaplotypeScore=55.8561;InbreedingCoeff=0.7279;MQ=45.57;MQ0=20;MQRankSum=-5.816;QD=16.46;ReadPosRankSum=0.690;VQSLOD=3.1607;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:27:30.55:0,31,342	1/1:2,3:5:12.01:111,12,0	./.	0/0:7,0:1:0.89:0,1,2	0/0:22,0:22:27.08:0,27,323	0/0:11,0:11:18.53:0,19,215	0/0:14,0:14:30.09:0,30,362	1/1:4,11:15:42.05:397,42,0	0/0:7,0:7:14.96:0,15,160	0/0:16,0:16:39.08:0,39,455	0/0:19,0:18:27.08:0,27,326	0/0:15,0:15:29.97:0,30,304	0/0:10,0:9:9.03:0,9,109	0/0:16,0:15:27.48:0,27,294	0/0:17,0:17:33.06:0,33,381	0/0:13,0:12:24.06:0,24,279	0/1:8,9:12:3.51:224,0,4	0/0:20,0:20:37.26:0,37,387	0/0:17,0:15:18.05:0,18,208	0/0:17,0:17:39.12:0,39,471	0/0:6,0:5:9.03:0,9,109	0/0:8,0:8:12.04:0,12,145	0/0:15,0:14:12.03:0,12,136	0/0:19,0:19:18.33:0,18,350	0/0:12,0:11:24.95:0,25,282	0/0:15,0:15:30.09:0,30,361	0/0:20,0:20:45.13:0,45,533	0/0:12,0:7:12.04:0,12,145
chr10	59973755	.	CTT	C	2845.69	PASS	AB=0.736;AC=32;AF=0.571;AN=56;BaseQRankSum=-7.199;DP=587;FS=1.417;HRun=14;HaplotypeScore=104.1304;InbreedingCoeff=0.0087;MQ=61.00;MQ0=12;MQRankSum=0.138;QD=5.57;ReadPosRankSum=4.220;VQSLOD=0.2904;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:14,0:23:4.54:103,0,5	0/0:2,0:12:24.95:0,25,86	0/1:61,0:20:3.86:4,0,133	0/1:52,2:22:20.04:20,0,54	1/1:5,0:20:26.04:117,26,0	0/0:10,0:17:31.70:0,32,170	1/1:14,1:15:15.12:77,15,0	0/1:19,2:26:16.55:17,0,95	1/1:4,0:8:10.87:47,11,0	0/1:8,8:17:12.64:223,0,13	0/1:12,6:16:12.34:198,0,12	0/1:14,1:20:11.07:11,0,78	0/0:8,0:11:12.53:0,13,74	1/1:4,4:6:12:111,12,0	1/1:10,12:23:38.32:315,38,0	0/1:14,3:15:9.11:68,0,9	0/0:11,1:27:12.74:0,13,153	1/1:6,0:13:12.15:57,12,0	1/1:5,10:15:12.39:204,12,0	0/1:11,7:19:46.70:227,0,47	1/1:9,3:11:0.92:97,1,0	0/0:4,0:9:8.24:0,8,34	0/1:9,0:21:30.19:30,0,93	0/1:8,1:16:13.28:13,0,46	0/1:10,17:28:0.53:396,0,1	0/1:10,10:21:48.86:225,0,49	1/1:17,13:31:17.29:375,17,0	0/1:5,6:11:84.82:88,0,85
chr10	59973768	.	TTC	T	1792.76	PASS	AB=0.993;AC=30;AF=0.536;AN=56;BaseQRankSum=2.076;DP=661;FS=14.943;HRun=0;HaplotypeScore=117.9309;InbreedingCoeff=-0.3492;MQ=50.80;MQ0=29;MQRankSum=-5.262;QD=3.11;ReadPosRankSum=0.392;VQSLOD=1.6418;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:23:6.74:0,7,65	0/1:16,0:16:19.50:19,0,106	0/1:75,0:16:37.11:37,0,84	0/1:66,0:20:30.74:31,0,71	0/1:28,0:27:35.05:40,0,35	0/1:22,0:22:99:117,0,113	1/1:13,0:13:26.34:174,26,0	0/1:32,0:28:72.26:120,0,72	0/1:13,0:13:28.25:28,0,54	0/1:23,1:21:32.85:97,0,33	1/1:19,1:18:10.96:172,11,0	0/0:18,0:18:5.52:0,6,83	0/0:13,0:13:0.45:0,0,75	0/1:12,0:9:9.88:14,0,10	1/1:24,0:22:6.24:91,6,0	1/1:17,1:16:6.89:88,7,0	0/0:26,0:26:12.56:0,13,157	0/1:13,0:11:5.29:45,0,5	0/1:16,0:15:20.51:40,0,21	0/1:21,2:22:56.41:196,0,56	1/1:8,0:6:8.93:29,9,0	0/1:12,0:12:6.90:7,0,41	0/1:27,0:25:64.72:65,0,111	0/1:13,0:13:11.58:12,0,81	0/1:34,0:33:60.71:150,0,61	0/1:24,0:23:8.35:154,0,8	1/1:32,0:30:38.40:205,38,0	0/1:12,0:12:26.37:26,0,64
chr10	59973769	.	TC	T	1568.66	PASS	AB=0.935;AC=27;AF=0.482;AN=56;BaseQRankSum=1.181;DP=655;FS=3.274;HRun=1;HaplotypeScore=109.3566;InbreedingCoeff=-0.6173;MQ=50.88;MQ0=31;MQRankSum=-3.667;QD=2.61;ReadPosRankSum=-0.823;VQSLOD=-0.6228;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:22:17.67:0,18,133	1/1:16,0:16:3.97:76,4,0	0/1:71,1:15:37:37,0,76	0/1:63,1:19:26.56:27,0,63	0/1:28,0:27:26.46:26,0,84	0/1:22,0:22:17.09:188,0,17	1/1:12,1:13:18.96:133,19,0	0/1:26,5:28:52.08:220,0,52	0/1:12,1:13:26.13:26,0,74	0/1:24,1:22:50.75:51,0,97	0/1:19,1:18:33.29:94,0,33	0/1:13,6:19:26.79:132,0,27	0/1:5,8:13:29.05:45,0,29	0/0:11,1:9:12.48:0,12,62	0/1:23,1:22:10.05:10,0,86	0/1:16,2:16:10.03:85,0,10	0/1:22,3:25:17.60:92,0,18	0/1:13,0:11:30.09:40,0,30	0/0:16,0:15:6.88:0,7,97	0/1:22,1:22:48.38:91,0,48	0/1:8,0:6:1.63:2,0,22	0/1:12,0:12:23.59:24,0,34	0/1:23,3:24:9.06:117,0,9	0/1:12,1:13:20.98:27,0,21	0/1:33,1:33:9.54:10,0,164	0/1:24,0:23:47.96:85,0,48	0/1:31,2:30:73.13:79,0,73	0/1:12,0:12:9.47:9,0,81
chr10	59976521	.	T	TG	1673.72	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-10.527;DP=747;FS=3.349;HRun=6;HaplotypeScore=71.7693;InbreedingCoeff=0.9607;MQ=79.28;MQ0=0;MQRankSum=-1.967;QD=24.61;ReadPosRankSum=-1.844;VQSLOD=2.7860;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,150,1521	1/1:1,2:3:6.01:67,6,0	0/0:23,0:23:63.13:0,63,635	0/0:20,0:20:48.10:0,48,480	0/0:30,0:30:81.15:0,81,817	0/0:16,0:16:48.11:0,48,490	0/0:23,0:23:63.11:0,63,629	1/1:6,27:33:72.19:874,72,0	0/0:21,0:21:57.11:0,57,574	0/0:47,0:47:99:0,126,1285	0/0:25,0:25:69.15:0,69,704	0/0:31,0:31:81.16:0,81,818	0/0:25,0:25:63.12:0,63,635	0/0:25,0:25:72.16:0,72,735	0/0:27,0:27:72.16:0,72,734	0/0:24,0:24:60.13:0,60,612	1/1:7,25:32:69.22:868,69,0	0/0:37,0:37:99:0,99,999	0/0:14,0:14:33.07:0,33,336	0/0:20,0:20:51.09:0,51,519	0/0:60,0:60:99:0,171,1745	0/0:27,0:27:75.17:0,75,764	0/0:19,0:19:51.11:0,51,520	0/0:35,0:35:99:0,99,1009	0/0:25,0:25:69.11:0,69,685	0/0:25,0:25:66.13:0,66,661	0/0:19,0:19:51.12:0,51,520	0/0:9,0:9:24.05:0,24,244
chr10	59977013	.	T	TCACATC	13648.32	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=14.983;DP=571;FS=10.676;HRun=0;HaplotypeScore=130.0783;InbreedingCoeff=0.9792;MQ=92.23;MQ0=1;MQRankSum=-14.532;QD=85.30;ReadPosRankSum=4.037;VQSLOD=6.0396;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,111,2784	0/0:8,0:8:21.07:0,21,538	0/0:33,0:33:93.32:0,93,2157	0/0:22,0:22:48.42:0,48,1375	0/0:21,0:21:60.21:0,60,1505	0/0:20,0:20:57.20:0,57,1453	0/0:30,0:30:90.29:0,90,2191	0/0:41,0:41:99:0,123,3073	0/0:25,0:25:72.25:0,72,1839	1/1:1,13:17:48.16:1651,48,0	1/1:0,7:8:21.07:759,21,0	0/0:33,0:33:99:0,99,2423	0/0:23,0:22:60.20:0,60,1460	1/1:0,15:15:42.14:1511,42,0	1/1:2,10:12:30.10:1087,30,0	1/1:2,10:14:24.08:869,24,0	0/0:42,0:41:99:0,123,3038	0/0:21,0:19:51.17:0,51,1244	1/1:2,6:11:24.01:692,24,0	1/1:0,14:14:36.12:1298,36,0	1/1:1,5:8:12.04:439,12,0	0/0:10,0:10:30.10:0,30,736	0/0:15,0:15:45.14:0,45,1092	0/0:29,0:29:84.29:0,84,2124	1/1:1,18:23:57.20:2038,57,0	1/1:0,15:17:51.17:1787,51,0	1/1:0,11:17:36.12:1302,36,0	1/1:0,2:2:6.02:216,6,0
chr10	59977397	.	G	GGCGC	745.98	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-4.441;DP=742;FS=11.461;HRun=0;HaplotypeScore=156.0879;InbreedingCoeff=0.8830;MQ=74.79;MQ0=16;MQRankSum=-1.687;QD=14.35;ReadPosRankSum=-1.864;VQSLOD=2.3015;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:63.07:0,63,870	1/1:4,0:4:6.02:87,6,0	0/0:63,0:33:74.71:0,75,1144	0/0:88,0:35:80.50:0,80,1093	0/0:14,0:13:33.11:0,33,444	0/0:22,0:22:39.11:0,39,490	0/0:36,0:36:75.21:0,75,1066	1/1:24,0:23:50.17:701,50,0	0/0:26,0:26:44.93:0,45,654	0/0:21,0:20:57.19:0,57,1050	0/0:15,0:15:39.10:0,39,632	0/0:29,0:29:69.22:0,69,983	0/0:20,0:21:36.11:0,36,506	0/0:21,0:21:54.18:0,54,1003	0/0:24,0:24:69.21:0,69,1219	0/0:25,0:25:69.20:0,69,1183	1/1:1,20:24:2.52:81,3,0	0/0:27,0:27:62.84:0,63,813	0/0:30,0:29:81.24:0,81,1383	0/0:17,0:16:38.80:0,39,718	0/0:23,0:21:52.02:0,52,848	0/0:15,0:15:42.14:0,42,606	0/0:22,0:22:29.57:0,30,435	0/0:35,0:36:75.24:0,75,1015	0/0:23,0:24:54.18:0,54,955	0/0:25,0:26:72.22:0,72,1230	0/0:21,0:21:60.20:0,60,1068	0/0:9,0:7:18.06:0,18,326
chr10	59977398	.	GCT	G	3889.11	PASS	AB=1.000;AC=24;AF=0.429;AN=56;BaseQRankSum=-10.206;DP=752;FS=5.345;HRun=0;HaplotypeScore=121.5054;InbreedingCoeff=0.7868;MQ=74.25;MQ0=16;MQRankSum=1.580;QD=12.27;ReadPosRankSum=1.273;VQSLOD=3.3507;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,22:35:36.11:415,36,0	0/0:4,0:4:0:0,0,0	0/0:65,0:33:5.76:0,6,80	0/0:88,0:35:24.51:0,25,211	1/1:3,11:13:24.03:262,24,0	1/1:4,17:21:30.09:346,30,0	1/1:14,20:35:41.48:420,41,0	0/0:27,0:26:15.87:0,16,159	1/1:8,18:26:21.06:243,21,0	0/0:22,0:21:16.47:0,16,441	0/1:15,0:15:73.53:74,0,188	1/1:12,15:29:32.76:340,33,0	1/1:6,15:21:19.56:239,20,0	0/0:22,0:22:54.10:0,54,545	0/0:24,0:24:55.80:0,56,515	0/0:25,0:25:15.88:0,16,429	0/0:31,0:31:8.97:0,9,73	1/1:10,15:26:38.68:408,39,0	0/0:30,0:29:9.49:0,9,284	0/0:17,0:16:29.90:0,30,296	0/1:24,0:22:53.86:54,0,266	1/1:7,8:15:23.90:257,24,0	1/1:7,15:22:14.70:173,15,0	1/1:7,27:34:57.17:659,57,0	0/0:24,0:24:25.33:0,25,410	0/0:26,0:26:25.25:0,25,479	0/0:21,0:21:41.82:0,42,438	0/0:9,0:7:12.03:0,12,126
chr10	59978164	.	CT	C	2765.80	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.820;DP=744;FS=0.000;HRun=3;HaplotypeScore=71.3944;InbreedingCoeff=0.9942;MQ=82.81;MQ0=0;MQRankSum=0.433;QD=31.43;ReadPosRankSum=-0.533;VQSLOD=3.2970;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,114,1603	1/1:0,12:12:33.10:406,33,0	0/0:20,0:20:60.14:0,60,761	0/0:20,1:21:57.18:0,57,773	0/0:27,0:27:78.26:0,78,1108	0/0:18,0:18:54.18:0,54,777	0/0:33,0:33:99:0,99,1336	1/1:2,33:35:99:1201,99,0	0/0:27,0:27:81.26:0,81,1146	0/0:27,0:27:81.27:0,81,1159	0/0:15,0:15:39.13:0,39,562	0/0:34,0:34:99:0,99,1419	0/0:22,0:22:60.17:0,60,827	0/0:32,0:32:84.26:0,84,1175	0/0:39,0:39:99:0,117,1630	0/0:26,0:26:78.26:0,78,1124	1/1:2,39:41:99:1302,105,0	0/0:25,0:25:72.21:0,72,1014	0/0:16,0:16:42.12:0,42,570	0/0:14,0:14:39.12:0,39,539	0/0:58,0:57:99:0,171,2377	0/0:19,0:19:57.19:0,57,814	0/0:27,0:27:78.25:0,78,1099	0/0:34,0:34:99:0,99,1371	0/0:18,0:18:51.17:0,51,734	0/0:26,0:26:78.26:0,78,1124	0/0:31,0:31:93.29:0,93,1303	0/0:5,0:5:15.05:0,15,216
chr10	59978424	.	AAAAC	A	1364.77	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.174;DP=748;FS=4.348;HRun=0;HaplotypeScore=122.5666;InbreedingCoeff=0.9867;MQ=63.71;MQ0=2;MQRankSum=2.538;QD=19.50;ReadPosRankSum=1.298;VQSLOD=3.1824;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,99,2362	1/1:3,8:11:18.06:289,18,0	0/0:38,0:30:28.86:0,29,510	0/0:26,0:24:27.09:0,27,531	0/0:36,0:36:87.30:0,87,2030	0/0:26,0:26:48.16:0,48,1122	0/0:29,0:29:57.20:0,57,1339	1/1:14,8:22:24.05:350,24,0	0/0:24,0:24:48.16:0,48,1077	0/0:30,0:30:55.42:0,55,1217	0/0:23,0:23:45.15:0,45,1065	0/0:24,0:24:57.16:0,57,1287	0/0:20,0:20:51.18:0,51,1220	0/0:23,0:23:51.17:0,51,1227	0/0:30,0:30:54.18:0,54,1250	0/0:22,0:22:42.13:0,42,963	1/1:13,24:37:53.72:867,54,0	0/0:36,0:36:82.52:0,83,1913	0/0:24,0:23:30.08:0,30,642	0/0:18,0:18:42.13:0,42,927	0/0:33,0:33:84.25:0,84,1919	0/0:12,0:12:27.09:0,27,650	0/0:25,0:25:54.19:0,54,1265	0/0:36,0:36:93.30:0,93,2151	0/0:30,0:30:68.01:0,68,1554	0/0:30,0:29:66.23:0,66,1533	0/0:32,1:33:18.02:0,18,1435	0/0:6,0:6:15.05:0,15,360
chr10	59980700	.	C	CT	2869.34	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-1.712;DP=642;FS=11.630;HRun=0;HaplotypeScore=88.3568;InbreedingCoeff=0.9979;MQ=80.48;MQ0=0;MQRankSum=-0.290;QD=37.75;ReadPosRankSum=-0.698;VQSLOD=2.3990;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,108,1454	1/1:0,8:8:20.99:304,21,0	0/0:26,0:25:72.21:0,72,962	0/0:19,0:19:51.16:0,51,682	0/0:20,0:20:59.99:0,60,730	0/0:18,0:18:51.13:0,51,686	0/0:21,0:21:63.20:0,63,861	1/1:0,27:27:81.19:1132,81,0	0/0:14,0:14:42.09:0,42,563	0/0:31,0:31:87.04:0,87,1149	0/0:12,0:12:36.12:0,36,502	0/0:22,0:22:66.22:0,66,910	0/0:20,0:20:57.19:0,57,795	0/0:25,0:25:69.18:0,69,918	0/0:31,0:31:87.09:0,87,1126	0/0:29,0:29:81.19:0,81,1087	1/1:2,39:41:99:1575,99,0	0/0:29,0:28:84.26:0,84,1154	0/0:16,0:16:45.11:0,45,605	0/0:9,0:9:27.03:0,27,338	0/0:39,0:39:99:0,114,1521	0/0:10,0:10:30.05:0,30,382	0/0:22,0:22:63.15:0,63,837	0/0:37,0:37:99:0,105,1403	0/0:17,0:17:48.05:0,48,604	0/0:23,0:23:66.06:0,66,851	0/0:26,0:26:71.42:0,71,1036	0/0:12,0:12:36.12:0,36,501
chr10	59980897	.	G	GCA	2314.87	PASS	AB=0.848;AC=34;AF=0.630;AN=54;BaseQRankSum=-3.138;DP=614;FS=0.000;HRun=0;HaplotypeScore=146.9394;InbreedingCoeff=0.1479;MQ=62.62;MQ0=9;MQRankSum=0.100;QD=4.89;ReadPosRankSum=-1.139;VQSLOD=2.4566;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:37,3:38:6.61:204,0,7	0/0:18,0:18:10.67:0,11,64	0/0:20,0:14:0.47:0,0,1	./.	0/0:21,0:21:3.45:0,3,25	0/1:13,8:21:32.21:245,0,32	0/1:12,6:18:68.07:158,0,68	0/0:30,0:30:5.49:0,5,24	1/1:12,4:16:17.77:215,18,0	1/1:19,0:20:15:64,15,0	1/1:5,0:7:2.84:14,3,0	0/1:10,8:20:39.93:159,0,40	0/1:9,14:24:6.15:327,0,6	1/1:29,0:31:29.80:168,30,0	1/1:24,0:27:16.04:137,16,0	1/1:23,0:27:25.69:181,26,0	0/0:24,0:24:51.13:0,51,250	1/1:13,2:15:9.92:132,10,0	0/1:23,0:22:10.90:23,0,11	0/1:5,0:6:0:0,0,0	1/1:60,0:55:24.46:125,24,0	0/1:7,4:11:36:36,0,38	1/1:9,0:9:6:67,6,0	1/1:21,0:29:2.52:26,3,0	0/1:10,0:12:5.54:6,0,17	1/1:27,0:29:11.79:66,12,0	0/1:17,0:17:5.63:65,0,6	1/1:8,0:8:14.46:57,14,0
chr10	59980929	.	A	ATG	2539.84	PASS	AB=0.869;AC=18;AF=0.321;AN=56;BaseQRankSum=11.471;DP=766;FS=7.013;HRun=0;HaplotypeScore=156.6306;InbreedingCoeff=-0.2319;MQ=48.28;MQ0=72;MQRankSum=-1.409;QD=5.64;ReadPosRankSum=7.513;VQSLOD=1.9422;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:40,3:38:15.38:15,0,210	1/1:10,0:10:2.77:107,3,0	0/0:60,0:18:38.83:0,39,597	0/0:61,0:25:53.79:0,54,899	0/0:22,0:22:8.61:0,9,133	0/0:21,0:21:37.17:0,37,417	0/0:21,0:21:45.83:0,46,627	0/1:35,0:34:99:273,0,642	0/1:22,4:22:16.64:17,0,85	0/1:16,5:17:99:173,0,135	0/1:5,2:6:4.42:16,0,4	0/0:24,0:24:42.23:0,42,502	0/0:31,0:30:47.26:0,47,518	0/1:24,7:27:4.88:255,0,5	0/1:24,4:25:99:233,0,104	0/1:21,4:22:66.97:271,0,67	0/1:29,1:25:2.70:159,0,3	0/0:18,0:17:9.85:0,10,156	0/1:19,3:18:29.02:29,0,375	0/1:8,1:7:28.82:37,0,29	0/1:67,20:58:99:527,0,148	0/0:14,0:14:22.63:0,23,327	0/0:7,0:7:14.25:0,14,169	0/0:37,0:35:41.71:0,42,611	0/1:12,2:12:5.05:116,0,5	0/1:24,5:21:99:123,0,221	0/1:13,4:12:39.96:132,0,40	0/1:13,2:14:49.31:216,0,49
chr10	59980931	.	A	ATG	5306.53	PASS	AB=0.874;AC=22;AF=0.393;AN=56;BaseQRankSum=6.232;DP=757;FS=0.390;HRun=0;HaplotypeScore=151.8241;InbreedingCoeff=0.1475;MQ=49.16;MQ0=72;MQRankSum=-1.624;QD=12.97;ReadPosRankSum=4.288;VQSLOD=4.2748;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:40,5:39:91.42:91,0,199	0/1:10,0:10:30.62:31,0,44	0/0:63,0:21:30.30:0,30,573	0/0:60,0:24:52.99:0,53,864	0/0:22,0:22:5.60:0,6,94	0/0:20,0:20:30.92:0,31,354	0/0:22,0:22:46.14:0,46,623	0/1:35,0:34:99:186,0,638	0/1:26,0:22:23.91:24,0,83	0/1:15,4:15:67.28:436,0,67	1/1:5,2:6:2.47:59,2,0	0/0:24,0:24:26.87:0,27,506	0/0:32,0:31:46.30:0,46,542	1/1:17,13:26:44.02:773,44,0	1/1:18,9:24:47.85:721,48,0	1/1:15,8:21:9.13:667,9,0	0/0:29,0:24:3:0,3,157	0/0:18,0:17:1.82:0,2,113	0/1:18,3:18:99:154,0,228	0/1:7,2:7:22.85:32,0,23	1/1:75,9:53:39.49:929,39,0	0/0:14,0:14:25.64:0,26,373	0/0:7,0:7:14.25:0,14,165	0/0:37,0:35:41.68:0,42,586	1/1:10,4:12:10.89:137,11,0	0/1:21,5:18:15.98:351,0,16	0/1:12,5:13:16.11:313,0,16	0/1:9,6:14:27.40:404,0,27
chr10	59980934	.	CA	C	3891.63	PASS	AB=0.733;AC=21;AF=0.375;AN=56;BaseQRankSum=10.664;DP=749;FS=8.333;HRun=1;HaplotypeScore=138.1425;InbreedingCoeff=0.0189;MQ=50.13;MQ0=69;MQRankSum=1.424;QD=9.31;ReadPosRankSum=5.295;VQSLOD=1.1115;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:33,8:36:92.76:93,0,302	1/1:0,8:8:21.07:291,21,0	0/0:66,0:24:46.43:0,46,710	0/0:61,0:26:69.11:0,69,856	0/0:21,0:21:6:0,6,72	0/0:19,0:19:39.10:0,39,470	0/0:25,0:25:63.16:0,63,772	0/1:19,15:33:99:326,0,624	0/0:21,4:21:4.45:0,4,151	0/1:11,8:15:97.92:209,0,98	0/1:5,2:6:17.21:17,0,25	0/0:23,0:23:45.71:0,46,524	0/0:32,0:31:63.64:0,64,750	0/1:17,14:27:11.31:233,0,11	0/1:17,9:23:36.64:231,0,37	0/1:15,11:23:64.95:250,0,65	1/1:3,26:24:60.09:775,60,0	0/1:17,1:17:11.35:11,0,210	0/1:16,8:21:99:128,0,297	0/1:5,4:7:27.21:74,0,27	0/1:34,46:52:0.69:581,0,1	0/0:16,0:16:33.08:0,33,414	0/0:8,0:8:18.05:0,18,225	0/0:35,0:34:38.90:0,39,487	1/1:7,8:13:6.76:86,7,0	0/1:10,11:13:62.01:171,0,62	1/1:6,10:12:21.40:212,21,0	0/1:8,6:13:50.49:204,0,50
chr10	59980935	.	A	AC	4780.99	PASS	AB=0.800;AC=26;AF=0.464;AN=56;BaseQRankSum=10.406;DP=772;FS=8.337;HRun=1;HaplotypeScore=144.1270;InbreedingCoeff=0.2354;MQ=51.02;MQ0=69;MQRankSum=-0.353;QD=10.39;ReadPosRankSum=4.481;VQSLOD=2.6841;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:38,5:38:99:136,0,137	1/1:8,0:8:17.98:93,18,0	0/0:68,0:26:60.20:0,60,713	0/0:62,0:28:69.02:0,69,859	0/0:7,0:21:3.01:0,3,39	0/0:20,0:20:28.54:0,29,288	0/0:26,0:26:53.12:0,53,612	0/1:37,0:36:99:257,0,624	0/1:11,1:23:11.80:12,0,26	0/1:16,4:16:66.92:317,0,67	0/1:5,2:6:13.61:38,0,14	0/0:23,0:23:40.86:0,41,431	0/0:32,0:31:49.72:0,50,527	1/1:19,12:27:37.25:546,37,0	1/1:18,9:24:5.40:386,5,0	1/1:20,8:25:15.16:486,15,0	1/1:32,0:27:50.55:237,51,0	0/1:8,0:20:27.53:28,0,98	0/1:23,2:22:99:275,0,286	0/1:7,2:7:27.73:71,0,28	1/1:70,10:52:30:904,30,0	0/0:16,0:16:28.32:0,28,336	0/0:8,0:8:16.23:0,16,165	0/0:35,0:34:36.95:0,37,442	1/1:10,4:12:8.58:90,9,0	0/1:16,5:13:35.55:297,0,36	1/1:11,5:12:23.20:280,23,0	0/1:8,6:13:42.39:329,0,42
chr10	59981144	.	TCCC	T	4980.89	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=2.158;DP=418;FS=1.396;HRun=9;HaplotypeScore=70.5946;InbreedingCoeff=0.8169;MQ=77.77;MQ0=0;MQRankSum=-1.462;QD=30.56;ReadPosRankSum=6.961;VQSLOD=3.1016;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,30:33:66.21:914,66,0	1/1:0,7:7:15.05:212,15,0	0/0:13,0:12:20.95:0,21,458	0/0:21,0:20:45.01:0,45,653	1/1:2,21:23:45.03:607,45,0	0/0:12,0:14:36.05:0,36,572	0/0:21,0:22:59.88:0,60,1102	1/1:5,10:16:26.99:329,27,0	1/1:0,22:22:54.18:759,54,0	0/0:12,0:13:16.49:0,16,217	0/0:3,0:3:3.90:0,4,60	0/0:22,0:23:60.14:0,60,998	0/0:24,0:24:69.05:0,69,1300	0/0:7,0:7:9.03:0,9,147	0/0:10,0:12:14.29:0,14,221	0/0:5,0:6:10.57:0,11,120	1/1:2,32:34:84.28:1191,84,0	1/1:2,26:28:69.23:970,69,0	0/0:5,0:8:6.02:0,6,92	0/0:5,0:5:5.62:0,6,43	0/0:10,0:10:11.71:0,12,111	0/0:11,0:11:30.07:0,30,525	0/0:12,0:12:30.09:0,30,590	0/0:23,0:23:63.16:0,63,1229	0/0:2,0:2:2.28:0,2,10	0/0:11,0:16:11.06:0,11,132	0/0:3,0:8:3.01:0,3,44	0/0:2,0:2:3.90:0,4,62
chr10	59981521	.	A	AT	6972.44	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-13.356;DP=620;FS=12.336;HRun=7;HaplotypeScore=55.6128;InbreedingCoeff=0.9888;MQ=85.48;MQ0=0;MQRankSum=-0.640;QD=29.54;ReadPosRankSum=1.453;VQSLOD=4.6640;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:63,0:63:99:0,159,1535	0/0:8,0:8:18.01:0,18,168	0/0:15,0:15:20.44:0,20,274	0/0:24,0:24:45.04:0,45,427	0/0:20,0:20:48.07:0,48,464	0/0:12,0:12:30.04:0,30,290	0/0:20,0:20:57.09:0,57,550	0/0:25,0:25:57.09:0,57,551	0/0:17,0:17:48.08:0,48,463	1/1:5,26:31:78.22:928,78,0	1/1:2,6:8:18.06:217,18,0	0/0:21,0:21:60.10:0,60,579	0/0:21,0:21:57.09:0,57,550	1/1:1,18:19:51.16:616,51,0	1/1:3,22:25:66.16:781,66,0	1/1:1,19:20:54.17:652,54,0	0/0:30,0:30:75.11:0,75,724	0/0:31,0:31:81.08:0,81,772	1/1:6,17:24:54.03:631,54,0	1/1:2,13:15:39.04:438,39,0	1/1:2,23:25:69.21:833,69,0	0/0:30,0:30:84.13:0,84,811	0/0:23,0:23:54.08:0,54,521	0/0:24,0:24:72.12:0,72,695	1/1:1,14:15:39.12:471,39,0	1/1:5,20:25:31.19:646,31,0	1/1:4,18:22:54.17:650,54,0	1/1:4,3:7:9.03:109,9,0
chr10	59983234	.	AC	A	2770.41	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=7.669;DP=736;FS=5.470;HRun=3;HaplotypeScore=71.6350;InbreedingCoeff=0.9914;MQ=78.72;MQ0=0;MQRankSum=-2.333;QD=30.78;ReadPosRankSum=-1.590;VQSLOD=2.8177;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,138,1969	1/1:1,14:15:39.12:483,39,0	0/0:28,0:28:81.27:0,81,1148	0/0:24,0:22:63.19:0,63,881	0/0:20,0:20:60.20:0,60,863	0/0:20,0:20:60.19:0,60,847	0/0:22,0:22:57.17:0,57,802	1/1:4,34:38:99:1240,102,0	0/0:16,1:17:13.97:0,14,645	0/0:40,0:39:99:0,111,1583	0/0:23,0:23:66.21:0,66,931	0/0:29,0:29:81.26:0,81,1150	0/0:26,0:26:75.25:0,75,1079	0/0:22,0:22:63.21:0,63,906	0/0:36,0:36:99:0,108,1503	0/0:28,0:28:84.22:0,84,1135	1/1:1,36:37:96.30:1190,96,0	0/0:30,0:30:81.25:0,81,1146	0/0:13,0:13:39.13:0,39,562	0/0:28,0:28:81.26:0,81,1148	0/0:34,0:34:99:0,102,1449	0/0:29,0:29:84.26:0,84,1171	0/0:18,0:18:54.18:0,54,775	0/0:28,0:27:78.26:0,78,1120	0/0:15,0:15:45.15:0,45,648	0/0:28,0:28:84.27:0,84,1188	0/0:31,0:31:93.31:0,93,1339	0/0:9,0:9:21.07:0,21,302
chr10	59984341	.	CG	C	377.11	PASS	AC=6;AF=0.115;AN=52;BaseQRankSum=3.068;DP=196;FS=2.252;HRun=2;HaplotypeScore=26.1533;InbreedingCoeff=0.6543;MQ=33.22;MQ0=11;MQRankSum=-0.240;QD=17.14;ReadPosRankSum=-1.115;VQSLOD=3.2280;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:12:30:0,30,385	1/1:1,5:5:12:133,12,0	./.	0/0:4,0:1:2.80:0,3,13	0/0:9,0:9:18.02:0,18,241	0/0:15,0:13:30.06:0,30,419	0/0:7,0:6:12:0,12,153	1/1:1,5:4:12.04:152,12,0	0/0:3,0:3:5.81:0,6,57	0/0:11,0:10:26.99:0,27,340	0/0:9,0:8:14.68:0,15,221	0/0:7,0:7:7.45:0,7,174	0/0:4,0:4:12.04:0,12,177	0/0:10,0:10:26.62:0,27,304	0/0:4,0:4:5.60:0,6,26	0/0:2,0:2:6.02:0,6,88	1/1:0,9:10:7.37:216,7,0	0/0:9,0:9:17.98:0,18,200	0/0:8,0:4:12.01:0,12,154	0/0:9,0:8:18.06:0,18,254	0/0:4,0:4:3.01:0,3,44	0/0:7,0:6:15.05:0,15,216	0/0:4,0:4:9.03:0,9,133	0/0:12,0:11:18.05:0,18,236	0/0:5,0:4:9.03:0,9,121	0/0:6,0:6:15.01:0,15,197	0/0:7,0:6:17.78:0,18,214	./.
chr10	59984352	.	GA	G	1392.45	PASS	AB=0.790;AC=17;AF=0.304;AN=56;BaseQRankSum=11.513;DP=395;FS=11.667;HRun=8;HaplotypeScore=83.0502;InbreedingCoeff=-0.3356;MQ=36.62;MQ0=16;MQRankSum=-2.558;QD=5.44;ReadPosRankSum=2.905;VQSLOD=0.2515;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,1:19:16.64:0,17,405	0/1:10,2:11:35.06:35,0,188	1/1:6,0:3:1.06:3,1,0	0/0:7,0:3:2.98:0,3,14	0/1:11,8:19:99:182,0,278	0/1:18,4:20:80.72:81,0,374	0/0:12,0:11:18.04:0,18,209	0/0:16,0:12:33.02:0,33,346	0/0:4,0:4:9.03:0,9,118	0/1:18,4:20:72.41:72,0,436	0/1:14,2:15:5.38:5,0,197	0/1:12,1:13:6.32:6,0,203	0/1:6,2:8:42.63:43,0,122	0/1:15,5:20:99:99,0,410	0/0:10,0:10:17.45:0,17,168	0/1:5,2:6:50.96:51,0,70	0/0:16,1:17:6.98:0,7,251	0/0:17,0:17:21.54:0,22,280	0/0:9,0:6:15.05:0,15,205	0/1:15,8:22:99:165,0,299	0/0:5,0:5:8.48:0,8,112	0/1:12,9:19:99:189,0,235	0/1:6,5:11:99:120,0,169	0/0:16,1:16:23.54:0,24,240	0/1:12,10:21:69.01:272,0,69	0/1:10,6:16:99:157,0,287	0/1:15,3:17:61.24:61,0,335	0/0:5,0:2:0.89:0,1,2
chr10	59985779	.	T	TCACCTGCAAGTTTCACGT	2660.39	PASS	AB=0.756;AC=28;AF=0.933;AN=30;BaseQRankSum=-1.904;DP=49;FS=6.340;HRun=0;HaplotypeScore=35.8141;InbreedingCoeff=-0.2573;MQ=117.48;MQ0=1;MQRankSum=-1.503;QD=57.83;ReadPosRankSum=-0.167;VQSLOD=1.6653;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/1:5,1:8:13.28:1048,0,13	0/1:8,0:10:31.99:772,0,32	./.	./.	1/1:3,0:3:3.01:49,3,0	1/1:1,0:1:3.01:55,3,0	1/1:3,0:3:2.99:24,3,0	1/1:2,0:2:6.02:141,6,0	./.	1/1:1,0:2:3.01:72,3,0	./.	./.	./.	1/1:1,0:2:3.01:72,3,0	1/1:2,0:2:3.01:49,3,0	./.	1/1:1,0:1:3.01:90,3,0	./.	1/1:2,0:2:3.01:49,3,0	./.	./.	1/1:4,0:5:3.01:49,3,0	1/1:1,0:1:3.01:76,3,0	1/1:0,0:1:3.01:130,3,0	1/1:2,0:2:3.01:72,3,0	./.
chr10	59986807	.	C	CTA	645.39	PASS	AB=0.941;AC=9;AF=0.161;AN=56;BaseQRankSum=0.087;DP=547;FS=5.629;HRun=0;HaplotypeScore=81.5052;InbreedingCoeff=0.7213;MQ=72.95;MQ0=1;MQRankSum=-0.736;QD=6.03;ReadPosRankSum=1.250;VQSLOD=2.6334;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,27:29:3.15:154,3,0	0/0:2,0:2:2.99:0,3,24	0/0:30,0:24:55.92:0,56,522	0/0:31,0:23:47.97:0,48,458	1/1:3,20:23:6.66:185,7,0	0/0:9,0:9:26.94:0,27,219	0/0:14,0:13:28.78:0,29,227	0/0:26,0:26:65.94:0,66,569	1/1:5,14:20:3.85:154,4,0	0/0:17,0:17:36.01:0,36,349	0/0:21,0:21:38.42:0,38,431	0/0:14,0:14:26.98:0,27,230	0/0:23,0:23:50.46:0,50,421	0/0:10,0:10:26.96:0,27,235	0/0:23,0:23:53.97:0,54,526	0/0:21,0:21:36.86:0,37,437	0/0:26,0:26:23.41:0,23,179	1/1:19,0:18:42.39:284,42,0	0/0:15,0:14:32.91:0,33,276	0/0:15,0:15:38.97:0,39,353	0/0:24,0:23:62.96:0,63,626	0/0:20,0:20:56.89:0,57,467	0/0:21,0:21:59.74:0,60,509	0/0:30,0:30:46.58:0,47,672	0/0:18,0:18:47.96:0,48,443	0/1:15,1:16:7.49:7,0,353	0/0:16,0:16:41.52:0,42,316	0/0:14,0:14:38.94:0,39,360
chr10	59986810	.	TAC	T	798.46	PASS	AB=0.924;AC=20;AF=0.417;AN=48;BaseQRankSum=3.548;DP=567;FS=0.000;HRun=0;HaplotypeScore=78.9953;InbreedingCoeff=0.2098;MQ=66.61;MQ0=2;MQRankSum=-2.460;QD=2.73;ReadPosRankSum=0.501;VQSLOD=1.7308;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:33:0.20:0,0,144	./.	./.	./.	0/0:22,0:22:17.57:0,18,167	1/1:8,0:10:5.85:46,6,0	0/1:16,0:15:30.25:75,0,30	./.	0/0:18,0:18:15.03:0,15,148	0/0:15,0:15:12.03:0,12,158	0/0:23,0:23:15.03:0,15,175	1/1:5,7:13:17.88:175,18,0	1/1:14,9:23:15.04:161,15,0	0/1:9,2:11:23.55:24,0,46	0/1:21,3:24:8.17:8,0,271	0/1:21,0:22:8.36:8,0,116	1/1:17,0:26:5.68:28,6,0	1/1:15,3:18:1:160,1,0	0/0:18,0:16:6.01:0,6,70	0/1:14,3:17:45.77:46,0,110	0/0:26,4:29:6.63:0,7,417	1/1:18,1:20:14.84:126,15,0	0/1:22,3:25:46.46:46,0,118	0/1:28,2:32:54.76:55,0,420	0/0:18,0:18:12.02:0,12,153	0/0:19,0:19:13.34:0,13,120	0/0:18,0:18:6.63:0,7,73	0/0:13,0:13:8.52:0,9,98
chr10	59987603	.	GTCACCCTGTGCC	G	2313.73	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.183;DP=646;FS=2.669;HRun=0;HaplotypeScore=214.5483;InbreedingCoeff=0.9277;MQ=76.62;MQ0=0;MQRankSum=-4.510;QD=62.53;ReadPosRankSum=-1.496;VQSLOD=3.1134;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,138,7962	1/1:1,2:3:3.01:113,3,0	0/0:17,0:17:45.15:0,45,2178	0/0:11,0:11:27.09:0,27,1163	0/0:21,0:21:60.21:0,60,3471	0/0:16,0:16:48.16:0,48,2829	0/0:31,0:31:90.29:0,90,5106	1/1:3,19:22:57.16:1767,57,0	0/0:32,0:32:96.33:0,96,5626	0/0:27,0:27:78.26:0,78,4618	0/0:11,0:11:30.10:0,30,1525	0/0:34,0:34:99:0,99,5604	0/0:28,0:28:84.27:0,84,4835	0/0:25,0:25:75.26:0,75,4394	0/0:32,0:32:87.30:0,87,5197	0/0:27,0:27:78.25:0,78,4328	1/1:3,9:12:15.05:564,15,0	0/0:27,0:27:81.28:0,81,4411	0/0:21,0:21:57.16:0,57,2831	0/0:15,0:15:42.14:0,42,2487	0/0:47,0:47:99:0,141,8192	0/0:15,0:15:45.15:0,45,2501	0/0:18,0:18:54.19:0,54,2795	0/0:19,0:19:57.20:0,57,3269	0/0:16,0:16:42.14:0,42,2579	0/0:27,0:27:75.26:0,75,4527	0/0:20,0:20:57.20:0,57,3228	0/0:25,0:24:72.25:0,72,3925
chr10	59988184	.	TG	T	319.22	PASS	AB=0.784;AC=5;AF=0.089;AN=56;BaseQRankSum=6.288;DP=536;FS=4.912;HRun=3;HaplotypeScore=66.3992;InbreedingCoeff=-0.1128;MQ=45.25;MQ0=84;MQRankSum=-5.577;QD=2.55;ReadPosRankSum=-0.109;VQSLOD=-0.4972;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:28,8:14:63.42:96,0,63	0/1:2,3:3:29.59:30,0,35	0/0:17,0:5:12.01:0,12,143	0/0:16,0:7:12.04:0,12,170	0/0:13,3:7:5.88:0,6,54	0/0:13,0:13:24.08:0,24,345	0/0:29,0:29:66.18:0,66,923	0/0:12,1:7:17.88:0,18,243	0/1:14,2:8:16.07:16,0,194	0/0:17,0:13:39.13:0,39,561	0/0:6,0:5:6.02:0,6,86	0/0:24,0:24:69.23:0,69,992	0/0:11,0:11:30.09:0,30,413	0/0:25,0:17:42.14:0,42,604	0/0:24,0:21:51.17:0,51,726	0/0:11,0:8:18.06:0,18,258	0/1:11,11:14:99:197,0,150	0/1:42,4:20:97.33:97,0,438	0/0:12,0:7:21.07:0,21,299	0/0:5,0:4:12.04:0,12,173	0/0:61,0:41:92.89:0,93,1314	0/0:13,0:11:15.52:0,16,216	0/0:9,0:8:18.06:0,18,259	0/0:29,0:26:57.19:0,57,809	0/0:14,0:9:15.05:0,15,216	0/0:15,0:14:39.12:0,39,544	0/0:23,0:18:48.16:0,48,677	0/0:7,0:7:21.07:0,21,302
chr10	59988328	.	G	GACT	371.66	PASS	AC=12;AF=0.222;AN=54;BaseQRankSum=5.275;DP=681;FS=4.733;HRun=0;HaplotypeScore=74.5741;InbreedingCoeff=0.7443;MQ=44.82;MQ0=150;MQRankSum=-4.441;QD=9.53;ReadPosRankSum=-0.847;VQSLOD=2.0337;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,3:5:3.01:52,3,0	1/1:2,2:2:6.02:103,6,0	0/0:9,0:5:12.04:0,12,193	0/0:17,0:5:9.03:0,9,168	1/1:11,1:2:3.01:51,3,0	0/0:23,0:20:39.12:0,39,679	0/0:43,0:41:90.31:0,90,1675	./.	1/1:5,2:5:9.03:155,9,0	0/0:42,0:30:71.93:0,72,1228	0/0:25,0:13:9.03:0,9,150	0/0:33,0:31:81:0,81,1408	0/0:24,0:23:57.17:0,57,997	0/0:44,0:30:51.17:0,51,947	0/0:40,0:27:51.15:0,51,884	0/0:29,0:20:39.13:0,39,724	1/1:0,2:2:6.02:103,6,0	1/1:2,2:3:3.01:55,3,0	0/0:36,0:10:27.09:0,27,472	0/0:30,0:5:15.02:0,15,245	0/0:56,0:42:84.29:0,84,1563	0/0:13,0:6:9.03:0,9,168	0/0:21,0:14:33.10:0,33,584	0/0:22,0:21:54.17:0,54,965	0/0:42,0:22:21.07:0,21,373	0/0:39,0:23:60.21:0,60,1118	0/0:38,0:20:39.11:0,39,695	0/0:15,0:4:3.01:0,3,56
chr10	59988329	.	G	GGAGCAGC	1459.82	PASS	AC=12;AF=0.222;AN=54;BaseQRankSum=6.273;DP=694;FS=17.243;HRun=0;HaplotypeScore=106.5872;InbreedingCoeff=0.8218;MQ=44.89;MQ0=147;MQRankSum=-5.799;QD=26.07;ReadPosRankSum=-1.430;VQSLOD=1.8614;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:15,3:12:9.03:285,9,0	1/1:3,2:3:9.03:310,9,0	0/0:9,0:5:11.87:0,12,242	0/0:16,0:5:12.03:0,12,277	1/1:14,1:4:3.01:103,3,0	0/0:24,0:21:39.12:0,39,983	0/0:43,0:41:89.94:0,90,2493	./.	1/1:9,2:9:12.04:402,12,0	0/0:38,0:27:66.18:0,66,1674	0/0:25,0:13:9.03:0,9,205	0/0:33,0:31:81.02:0,81,2037	0/0:23,0:22:56.92:0,57,1433	0/0:46,0:32:51.18:0,51,1414	0/0:40,0:27:51.15:0,51,1276	0/0:29,0:20:39.13:0,39,1090	1/1:1,2:3:9.03:313,9,0	1/1:2,2:4:6.02:207,6,0	0/0:33,0:10:27.09:0,27,661	0/0:30,0:5:14.98:0,15,352	0/0:54,0:40:87.28:0,87,2358	0/0:13,0:6:9.03:0,9,251	0/0:23,0:16:33.09:0,33,863	0/0:22,0:21:54.18:0,54,1384	0/0:42,0:22:21.02:0,21,521	0/0:39,0:23:60.21:0,60,1644	0/0:38,0:20:35.99:0,36,966	0/0:15,0:4:3.01:0,3,84
chr10	59989170	.	C	CG	7699.11	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-13.171;DP=649;FS=2.317;HRun=0;HaplotypeScore=60.1989;InbreedingCoeff=0.9994;MQ=86.35;MQ0=0;MQRankSum=-3.935;QD=41.39;ReadPosRankSum=2.311;VQSLOD=5.5944;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,50:50:99:2054,129,0	1/1:0,9:9:24.08:383,24,0	0/0:23,0:23:57.14:0,57,746	0/0:19,0:20:46.87:0,47,601	1/1:0,22:22:60.20:956,60,0	0/0:20,0:20:60.15:0,60,770	0/0:25,0:25:75.22:0,75,1010	1/1:1,24:25:69.13:947,69,0	1/1:0,27:27:69.24:1100,69,0	0/0:24,0:24:66.21:0,66,896	0/0:14,0:14:42.11:0,42,562	0/0:29,0:29:81.27:0,81,1132	0/0:18,0:18:54.17:0,54,738	0/0:23,0:23:69.19:0,69,913	0/0:24,0:24:69.23:0,69,963	0/0:24,0:24:69.20:0,69,929	1/1:0,33:33:93.32:1483,93,0	1/1:0,20:20:51:776,51,0	0/0:15,0:15:45.15:0,45,627	0/0:10,0:10:27.07:0,27,345	0/0:28,0:28:81.24:0,81,1095	0/0:28,0:28:78.21:0,78,1021	0/0:24,0:24:72.20:0,72,955	0/0:31,0:31:93.31:0,93,1297	0/0:14,0:14:42.13:0,42,572	0/0:29,0:29:84.26:0,84,1128	0/0:23,0:23:69.19:0,69,923	0/0:17,0:17:51.17:0,51,713
chr10	59989632	.	ATGATGATGATGATGGTGGTGG	A	3057.04	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=6.259;DP=721;FS=0.663;HRun=0;HaplotypeScore=358.4210;InbreedingCoeff=0.9339;MQ=73.56;MQ0=10;MQRankSum=-6.259;QD=22.48;ReadPosRankSum=1.677;VQSLOD=1.4154;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,126,6532	0/0:11,0:11:19.30:0,19,407	0/0:27,0:20:48.12:0,48,976	0/0:42,0:33:87.07:0,87,1529	0/0:26,0:26:72.06:0,72,2990	1/1:2,17:19:11.39:312,11,0	1/1:1,15:16:3.01:165,3,0	0/0:25,0:25:66.65:0,67,2030	0/0:28,0:28:84.19:0,84,5339	0/0:27,0:27:75.12:0,75,2076	0/0:13,0:13:26.96:0,27,1152	1/1:2,23:25:30.03:1455,30,0	1/1:0,19:19:14.37:697,14,0	0/0:37,0:37:80.90:0,81,4879	0/0:23,0:23:47.86:0,48,2742	0/0:29,0:29:75.59:0,76,4671	0/0:40,0:40:57.46:0,57,1217	0/0:31,0:31:87.26:0,87,6049	0/0:23,0:22:60.06:0,60,2055	0/0:13,0:13:38.86:0,39,749	0/0:63,0:62:99:0,120,5411	1/1:15,0:14:19.66:157,20,0	1/1:8,3:10:12.30:96,12,0	1/1:5,26:31:7.89:359,8,0	0/0:14,0:14:41.87:0,42,1456	0/0:28,0:28:81.04:0,81,2251	0/0:29,0:29:81.05:0,81,3942	0/0:10,0:10:17.97:0,18,650
chr10	59989644	.	A	ATGG	7391.81	PASS	AC=26;AF=0.481;AN=54;BaseQRankSum=-11.822;DP=721;FS=6.094;HRun=0;HaplotypeScore=132.1768;InbreedingCoeff=0.8787;MQ=65.24;MQ0=26;MQRankSum=3.791;QD=22.40;ReadPosRankSum=2.785;VQSLOD=4.6957;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:40:81.15:0,81,1092	0/0:6,0:9:14.98:0,15,169	0/0:23,0:15:14.22:0,14,160	0/0:38,0:27:35.42:0,35,359	0/0:26,0:25:35.62:0,36,489	0/0:20,0:19:8.80:0,9,58	1/1:15,0:15:1.55:4,2,0	0/0:34,0:31:65.81:0,66,661	0/0:30,0:29:72.15:0,72,926	1/1:14,14:26:33.04:525,33,0	1/1:5,7:11:12.04:248,12,0	0/0:24,0:23:26.35:0,26,181	0/0:20,0:20:11.62:0,12,80	1/1:8,29:37:62.63:1292,63,0	1/1:4,16:20:27.06:560,27,0	1/1:9,21:31:4.48:919,4,0	0/0:38,0:38:29.79:0,30,338	0/0:33,0:33:81.09:0,81,1036	1/1:12,13:24:41.64:570,42,0	1/1:3,6:9:12:179,12,0	1/1:27,39:62:50.85:1057,51,0	./.	0/0:10,0:8:5.99:0,6,50	0/0:30,0:30:5.63:0,6,44	1/1:8,8:17:12.84:307,13,0	1/1:18,18:34:50.91:673,51,0	1/1:8,19:27:48.06:935,48,0	1/1:1,6:7:6.02:124,6,0
chr10	59989662	.	ATGATGGTGGTGATGG	A	2070.17	PASS	AB=1.000;AC=10;AF=0.185;AN=54;BaseQRankSum=3.783;DP=662;FS=0.000;HRun=0;HaplotypeScore=244.1709;InbreedingCoeff=0.2474;MQ=54.05;MQ0=34;MQRankSum=-6.938;QD=10.35;ReadPosRankSum=1.335;VQSLOD=1.8606;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:35:78.25:0,78,3920	1/1:7,0:6:9.02:280,9,0	0/0:19,0:12:20.09:0,20,491	0/0:26,0:17:26.96:0,27,598	0/0:18,0:17:45.10:0,45,2275	0/1:17,0:16:99:126,0,138	0/1:21,0:21:66.38:66,0,472	0/1:30,0:25:3.22:367,0,3	0/0:33,0:32:78.73:0,79,4360	0/0:23,0:21:45.15:0,45,2616	0/0:10,0:9:21.07:0,21,954	0/1:27,0:26:99:774,0,199	0/1:23,0:23:99:372,0,325	0/0:37,0:37:80.38:0,80,3747	0/0:23,0:23:50.73:0,51,2854	0/0:30,0:30:72.16:0,72,3928	1/1:9,28:37:5.78:56,6,0	0/0:30,0:30:81.24:0,81,4918	0/0:26,0:19:32.69:0,33,1488	0/0:10,0:10:23.91:0,24,855	0/0:52,0:47:81.57:0,82,4260	./.	0/0:11,0:9:8.95:0,9,182	0/1:38,0:38:99:175,0,231	0/0:14,0:13:21:0,21,1043	0/0:24,0:21:38.79:0,39,2156	0/0:25,0:25:63.14:0,63,2826	0/0:7,0:7:9.03:0,9,456
chr10	59990142	.	T	TC	7481.37	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-3.138;DP=352;FS=24.988;HRun=7;HaplotypeScore=65.5745;InbreedingCoeff=0.7513;MQ=86.90;MQ0=0;MQRankSum=-5.242;QD=23.31;ReadPosRankSum=3.553;VQSLOD=3.2909;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,0:9:8.82:56,9,0	1/1:0,6:6:15.05:180,15,0	0/0:17,0:17:19.74:0,20,221	0/0:14,0:14:27.14:0,27,220	1/1:4,0:4:3.01:32,3,0	1/1:3,12:15:27.08:323,27,0	1/1:6,11:17:33.10:396,33,0	1/1:5,14:19:39.06:435,39,0	1/1:5,0:7:16.90:97,17,0	1/1:2,5:7:18.05:215,18,0	1/1:5,5:10:15.05:180,15,0	1/1:4,13:17:42.13:498,42,0	1/1:2,9:11:30.05:338,30,0	1/1:3,24:27:55.41:645,55,0	1/1:0,13:13:39.12:468,39,0	1/1:2,9:11:30.04:343,30,0	1/1:7,21:28:45.15:637,45,0	1/1:2,0:8:9.10:45,9,0	1/1:4,3:7:6.01:144,6,0	1/1:3,7:10:17.84:194,18,0	1/1:4,15:19:46.93:529,47,0	1/1:3,5:8:15.05:180,15,0	1/1:4,6:10:7.20:202,7,0	1/1:2,15:17:33.57:397,34,0	1/1:1,7:8:18.06:216,18,0	1/1:6,7:13:27.06:303,27,0	1/1:1,9:10:24.07:284,24,0	1/1:2,8:10:12.04:144,12,0
chr10	59990527	.	CCCGGG	C	3496.71	PASS	AB=0.876;AC=28;AF=0.500;AN=56;BaseQRankSum=0.783;DP=482;FS=8.245;HRun=0;HaplotypeScore=91.3977;InbreedingCoeff=0.1919;MQ=61.08;MQ0=17;MQRankSum=-6.188;QD=11.66;ReadPosRankSum=4.459;VQSLOD=1.6113;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:22,1:35:99:134,0,162	0/0:2,0:2:0:0,0,0	0/0:54,0:9:23.80:0,24,330	0/0:38,0:12:26.91:0,27,393	0/1:20,0:21:44.54:45,0,95	1/1:3,19:22:23.54:734,24,0	1/1:0,17:19:27.04:457,27,0	0/1:15,0:15:20.77:21,0,67	0/0:19,0:19:14.64:0,15,95	0/0:15,0:15:19.86:0,20,184	0/0:4,0:9:2.56:0,3,47	1/1:4,15:19:35.69:721,36,0	1/1:2,7:9:14.30:219,14,0	0/1:4,0:11:0.98:3,0,1	0/1:9,0:9:23.74:26,0,24	0/1:4,0:4:17.53:26,0,18	0/0:23,1:24:47.35:0,47,651	0/1:28,0:28:38.94:39,0,99	0/1:11,0:12:66.65:67,0,157	0/0:5,0:13:9.12:0,9,178	1/1:3,0:23:5.54:15,6,0	1/1:3,13:16:27.07:460,27,0	1/1:3,15:18:15.35:262,15,0	1/1:0,7:7:9.03:185,9,0	0/1:16,0:16:60.40:60,0,149	0/1:2,0:14:22.13:22,0,60	0/0:6,0:8:3.17:0,3,59	1/1:0,0:2:0.47:1,0,0
chr10	59990528	.	CCGG	C	2974.98	PASS	AB=0.956;AC=39;AF=0.722;AN=54;BaseQRankSum=3.031;DP=469;FS=18.742;HRun=0;HaplotypeScore=85.0772;InbreedingCoeff=-0.0429;MQ=62.41;MQ0=17;MQRankSum=-5.596;QD=7.91;ReadPosRankSum=6.788;VQSLOD=0.8722;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:31,4:35:11.94:339,12,0	./.	0/0:55,0:10:23.48:0,23,192	0/0:38,0:12:28.31:0,28,296	0/1:7,13:21:0.98:207,0,1	1/1:22,0:22:40.68:275,41,0	1/1:19,0:19:26.71:193,27,0	0/1:15,0:15:30.84:48,0,31	1/1:1,18:19:6.07:147,6,0	0/1:10,0:10:20.32:20,0,39	0/1:9,0:9:20.50:21,0,22	1/1:19,0:19:35.65:246,36,0	1/1:9,0:9:17.20:116,17,0	1/1:11,0:11:10.22:125,10,0	1/1:6,0:6:0.77:20,1,0	1/1:4,0:4:7.57:57,8,0	0/1:25,0:25:25.47:25,0,175	1/1:8,17:27:44.19:571,44,0	0/1:10,0:11:49.26:49,0,58	0/1:13,0:13:25.51:26,0,82	1/1:23,0:23:17.85:143,18,0	1/1:16,0:16:26.42:173,26,0	1/1:18,0:18:15.27:107,15,0	1/1:7,0:7:8.93:63,9,0	0/1:9,0:10:26.25:26,0,58	0/1:13,0:13:14.94:50,0,15	0/1:10,0:10:73.24:74,0,73	0/1:4,0:4:17.96:18,0,60
chr10	59990529	.	CGG	C	1797.58	PASS	AB=0.958;AC=32;AF=0.593;AN=54;BaseQRankSum=4.449;DP=457;FS=34.491;HRun=12;HaplotypeScore=84.5469;InbreedingCoeff=0.6018;MQ=62.86;MQ0=16;MQRankSum=-5.340;QD=6.03;ReadPosRankSum=6.540;VQSLOD=-0.6411;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:28,1:29:26.30:204,26,0	./.	0/0:54,0:10:19.75:0,20,147	0/0:36,0:12:16.50:0,17,246	1/1:18,1:20:17.46:157,17,0	1/1:22,0:22:37.34:195,37,0	1/1:19,0:19:23.17:134,23,0	1/1:10,0:10:5.85:60,6,0	1/1:19,0:19:14.70:104,15,0	0/0:10,0:10:3.84:0,4,43	0/0:9,0:9:1.50:0,2,25	1/1:19,0:19:32.49:158,32,0	1/1:9,0:9:11.66:75,12,0	1/1:11,0:11:5.33:34,5,0	0/0:6,0:6:6.30:0,6,22	0/1:4,1:5:12.63:13,0,18	1/1:16,4:24:28.85:250,29,0	1/1:26,1:27:47.38:356,47,0	0/0:11,0:11:16.83:0,17,104	0/0:13,0:13:12.87:0,13,104	0/1:23,0:23:0.70:6,0,1	1/1:16,0:16:20.09:105,20,0	1/1:18,0:18:14.55:79,15,0	1/1:7,0:7:8.56:42,9,0	0/1:10,0:10:8.72:9,0,63	0/0:14,0:14:7.65:0,8,55	0/1:10,0:10:4.51:5,0,76	0/0:4,0:4:4.68:0,5,67
chr10	59990539	.	GGGA	G	852.21	PASS	AB=0.963;AC=15;AF=0.278;AN=54;BaseQRankSum=9.408;DP=430;FS=34.452;HRun=0;HaplotypeScore=99.2316;InbreedingCoeff=-0.2483;MQ=70.33;MQ0=9;MQRankSum=-8.924;QD=3.93;ReadPosRankSum=8.109;VQSLOD=-0.1220;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:25,1:26:55.90:56,0,74	./.	0/0:46,0:13:32.41:0,32,385	0/0:31,0:16:19.29:0,19,367	0/1:18,0:18:8.89:9,0,128	0/1:24,1:25:80.77:162,0,81	0/1:19,0:19:62.13:62,0,64	0/0:14,0:14:31.49:0,31,250	0/0:17,0:17:1.15:0,1,49	0/0:13,0:13:14.01:0,14,318	0/0:10,0:10:11.63:0,12,119	0/1:16,3:19:36.39:166,0,36	0/1:10,1:11:61.45:61,0,75	0/1:10,0:10:48.97:81,0,49	0/0:4,0:4:11.93:0,12,106	0/1:6,0:6:12.75:13,0,103	0/0:22,0:22:34.22:0,34,246	0/1:28,0:28:51.08:128,0,51	0/0:11,0:11:28.20:0,28,309	0/0:14,0:14:29.91:0,30,350	0/0:18,0:18:0.52:0,1,169	0/1:14,2:16:39.98:82,0,40	0/1:12,1:13:27.24:91,0,27	1/1:7,0:7:8.66:50,9,0	0/1:8,0:8:4.91:5,0,205	0/0:8,0:8:20.80:0,21,245	0/1:11,0:11:37.64:38,0,184	0/0:5,0:5:11.78:0,12,173
chr10	59991202	.	G	GGCTCCT	12523.74	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=11.155;DP=735;FS=4.262;HRun=0;HaplotypeScore=175.7864;InbreedingCoeff=0.9996;MQ=84.35;MQ0=0;MQRankSum=-17.248;QD=74.10;ReadPosRankSum=-2.393;VQSLOD=4.6972;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,24:36:83.31:2603,83,0	1/1:6,13:19:51.18:1708,51,0	0/0:31,0:31:74.36:0,74,1931	0/0:30,0:30:78.25:0,78,1787	1/1:6,16:22:28.16:874,28,0	0/0:23,0:23:66.23:0,66,1560	0/0:35,0:35:99:0,105,2477	1/1:16,13:29:63.17:1983,63,0	1/1:12,17:29:78.27:2446,78,0	0/0:30,0:30:90.31:0,90,2149	0/0:20,0:20:60.19:0,60,1374	0/0:29,0:29:87.30:0,87,2070	0/0:23,0:23:66.20:0,66,1535	0/0:29,0:29:80.93:0,81,1877	0/0:41,0:41:99:0,114,2719	0/0:32,0:32:93.32:0,93,2236	1/1:7,15:22:51.18:1833,51,0	1/1:4,8:12:30.10:1077,30,0	0/0:23,0:23:63.22:0,63,1515	0/0:28,0:28:81.26:0,81,1901	0/0:31,0:31:84.26:0,84,1902	0/0:20,0:20:57.20:0,57,1371	0/0:13,0:13:39.13:0,39,938	0/0:32,0:32:93.31:0,93,2190	0/0:28,0:28:84.25:0,84,1966	0/0:33,0:33:96.33:0,96,2308	0/0:25,0:25:75.26:0,75,1803	0/0:10,0:10:27.09:0,27,649
chr10	59991212	.	G	GTGCC	7903.78	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=9.347;DP=762;FS=6.090;HRun=0;HaplotypeScore=158.4690;InbreedingCoeff=0.9960;MQ=81.62;MQ0=0;MQRankSum=-15.224;QD=48.79;ReadPosRankSum=-2.257;VQSLOD=5.0255;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,23:31:75.10:1778,75,0	1/1:6,11:18:33.11:850,33,0	0/0:33,0:32:81.23:0,81,1423	0/0:28,0:29:71.53:0,72,1218	1/1:6,14:20:29.97:667,30,0	0/0:23,0:23:60.19:0,60,1063	0/0:33,0:33:84.27:0,84,1514	1/1:16,11:27:51.18:1316,51,0	1/1:5,21:28:63.22:1581,63,0	0/0:33,0:33:87.30:0,87,1597	0/0:26,0:26:72.22:0,72,1262	0/0:36,0:36:99:0,105,1931	0/0:24,0:24:72.23:0,72,1283	0/0:29,0:29:84.10:0,84,1513	0/0:43,0:43:99:0,129,2341	0/0:34,0:34:99:0,99,1780	1/1:5,15:20:36.12:920,36,0	1/1:7,10:18:30.10:791,30,0	0/0:21,0:21:54.15:0,54,918	0/0:28,0:28:84.29:0,84,1546	0/0:35,0:35:99:0,102,1861	0/0:22,0:22:66.20:0,66,1162	0/0:18,0:18:51.17:0,51,914	0/0:33,0:33:96.33:0,96,1765	0/0:29,0:29:84.29:0,84,1545	0/0:34,1:35:14.05:0,14,1537	0/0:27,0:27:78.27:0,78,1428	0/0:9,0:9:27.07:0,27,449
chr10	59991882	.	A	AC	8701.02	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-15.019;DP=820;FS=1.299;HRun=2;HaplotypeScore=78.7924;InbreedingCoeff=0.9999;MQ=82.35;MQ0=0;MQRankSum=-2.266;QD=38.00;ReadPosRankSum=0.621;VQSLOD=5.3183;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,48:51:99:1872,129,0	1/1:1,13:14:36.12:535,36,0	0/0:27,0:27:69.03:0,69,902	0/0:19,0:19:47.54:0,48,538	1/1:2,28:30:78.26:1168,78,0	0/0:21,0:21:60.19:0,60,778	0/0:25,0:25:72.23:0,72,935	1/1:3,36:39:99:1523,108,0	1/1:3,29:32:36.29:1040,36,0	0/0:20,0:20:57.18:0,57,727	0/0:20,0:20:54.17:0,54,688	0/0:29,0:29:87.28:0,87,1129	0/0:30,0:30:84.26:0,84,1074	0/0:27,0:27:78.24:0,78,998	0/0:37,0:37:99:0,111,1440	0/0:28,0:28:78.24:0,78,999	1/1:0,43:42:99:1754,117,0	1/1:0,20:20:54.18:809,54,0	0/0:38,0:38:99:0,102,1323	0/0:23,0:23:66.19:0,66,828	0/0:49,0:49:99:0,138,1791	0/0:26,0:26:78.25:0,78,1012	0/0:24,0:24:69.21:0,69,882	0/0:45,0:45:99:0,135,1674	0/0:30,0:30:90.29:0,90,1169	0/0:33,0:33:99:0,99,1285	0/0:28,0:28:84.25:0,84,1074	0/0:12,0:12:36.12:0,36,467
chr10	59992250	.	CA	C	3532.28	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=9.145;DP=698;FS=4.923;HRun=9;HaplotypeScore=73.8663;InbreedingCoeff=0.9977;MQ=75.63;MQ0=1;MQRankSum=-0.730;QD=21.54;ReadPosRankSum=3.019;VQSLOD=4.6462;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:40:99:0,111,1186	0/0:11,0:11:30.08:0,30,337	0/0:29,0:28:59.88:0,60,640	0/0:26,0:25:54.48:0,54,580	0/0:22,0:22:51.13:0,51,567	1/1:5,21:26:57.02:522,57,0	1/1:1,29:30:69.04:632,69,0	0/0:33,0:33:81.20:0,81,902	0/0:37,0:37:90.70:0,91,1012	0/0:26,1:27:53.53:0,54,745	0/0:21,0:21:57.17:0,57,652	1/1:3,17:20:16.44:405,16,0	1/1:0,14:14:39.02:357,39,0	0/0:15,0:15:39.10:0,39,439	0/0:22,0:22:54.16:0,54,617	0/0:31,0:31:87.20:0,87,971	0/0:37,0:36:96.24:0,96,1074	0/0:16,0:16:36.06:0,36,399	0/0:23,0:25:65.86:0,66,714	0/0:18,0:18:51.15:0,51,588	0/0:33,0:33:90.23:0,90,1025	1/1:5,26:31:72.03:656,72,0	1/1:2,15:17:39.02:357,39,0	1/1:3,23:26:66.03:604,66,0	0/0:17,0:19:41.78:0,42,444	0/0:36,0:36:90.26:0,90,1030	0/0:20,0:20:57.16:0,57,651	0/0:16,0:16:36.09:0,36,404
chr10	59992475	.	TTCAGA	T	21220.38	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=15.678;DP=652;FS=8.207;HRun=0;HaplotypeScore=152.0581;InbreedingCoeff=0.9939;MQ=79.35;MQ0=2;MQRankSum=-16.023;QD=50.05;ReadPosRankSum=5.551;VQSLOD=4.4905;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,129,3973	0/0:8,0:8:21.07:0,21,612	0/0:25,0:25:69.24:0,69,1814	0/0:27,0:27:71.73:0,72,1760	0/0:17,0:17:48.16:0,48,1505	1/1:2,10:12:21.07:431,21,0	1/1:5,23:28:66.23:1407,66,0	0/0:33,0:33:93.32:0,93,2835	0/0:21,0:21:60.21:0,60,1882	1/1:2,22:24:63.68:1329,64,0	1/1:0,8:8:21.07:455,21,0	1/1:5,29:34:84.29:1823,84,0	1/1:2,19:21:48.16:1042,48,0	1/1:0,30:30:78.27:1692,78,0	1/1:1,32:33:87.30:1883,87,0	1/1:2,34:36:96.33:2083,96,0	0/0:25,0:25:72.25:0,72,2251	0/0:27,0:27:78.27:0,78,2356	1/1:2,21:23:57.20:1208,57,0	1/1:1,13:13:24.08:521,24,0	1/1:5,22:27:30.10:642,30,0	1/1:4,19:22:45.15:963,45,0	1/1:1,8:9:18.06:360,18,0	1/1:3,27:30:72.72:1564,73,0	1/1:0,13:13:29.42:605,29,0	1/1:3,23:26:69.22:1457,69,0	1/1:1,22:23:66.23:1432,66,0	1/1:3,7:10:15.05:326,15,0
chr10	59992477	.	CAGAT	C	10861.07	PASS	AB=1.000;AC=37;AF=0.661;AN=56;BaseQRankSum=17.770;DP=614;FS=4.854;HRun=0;HaplotypeScore=170.5866;InbreedingCoeff=0.9271;MQ=81.08;MQ0=2;MQRankSum=-16.399;QD=27.92;ReadPosRankSum=6.745;VQSLOD=4.2522;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,132,3660	0/0:7,0:7:21.07:0,21,562	0/0:25,0:25:74.92:0,75,1770	0/0:27,0:27:75.13:0,75,1710	0/0:18,0:18:51.18:0,51,1432	1/1:10,0:10:21.06:237,21,0	1/1:23,0:23:66.18:733,66,0	0/0:33,0:33:96.33:0,96,2697	0/0:20,0:20:60.21:0,60,1698	1/1:22,0:22:60.16:659,60,0	1/1:8,0:8:21.06:231,21,0	1/1:30,2:32:84.23:922,84,0	1/1:19,0:19:48.13:528,48,0	1/1:30,0:30:78.21:858,78,0	1/1:32,0:32:87.24:984,87,0	1/1:34,0:34:96.26:1055,96,0	0/0:24,0:24:72.25:0,72,2037	0/0:26,0:26:78.27:0,78,2120	1/1:21,0:21:56.64:629,57,0	1/1:13,1:13:7.34:243,7,0	0/1:22,0:22:3.37:319,0,3	1/1:19,2:20:28.39:492,28,0	1/1:8,0:8:18.05:231,18,0	1/1:27,0:27:72.67:793,73,0	1/1:13,0:13:29.51:319,30,0	1/1:23,0:23:65.18:724,65,0	1/1:22,1:23:66.18:737,66,0	1/1:7,0:7:15.04:166,15,0
chr10	60029207	.	CTT	C	1816.19	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=7.730;DP=399;FS=2.115;HRun=2;HaplotypeScore=49.8971;InbreedingCoeff=0.9128;MQ=56.80;MQ0=3;MQRankSum=-2.009;QD=34.93;ReadPosRankSum=0.400;VQSLOD=3.6210;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:81.23:0,81,1544	0/0:6,0:6:18.05:0,18,331	0/0:25,0:21:48.67:0,49,910	0/0:25,0:13:26.77:0,27,552	0/0:9,0:7:20.65:0,21,326	1/1:0,12:12:27.09:439,27,0	1/1:0,3:3:6.02:98,6,0	0/0:27,0:27:81.28:0,81,1634	0/0:6,0:6:18.06:0,18,366	0/0:9,0:9:27.09:0,27,548	0/0:9,0:9:21.02:0,21,380	1/1:0,13:13:33.11:536,33,0	1/1:0,4:4:12.04:195,12,0	0/0:7,0:7:21.07:0,21,426	0/0:10,0:10:30.09:0,30,573	0/0:14,0:14:42.13:0,42,817	0/0:29,0:29:84.25:0,84,1631	0/0:17,0:17:51.14:0,51,961	0/0:25,0:23:66.20:0,66,1302	0/0:5,0:3:9.03:0,9,182	0/0:27,0:27:75.24:0,75,1484	1/1:0,2:2:3.01:49,3,0	1/1:0,5:5:9.03:146,9,0	1/1:0,13:13:33.11:536,33,0	0/0:6,0:6:17.99:0,18,321	0/0:18,0:18:54.12:0,54,1016	0/0:18,0:18:54.19:0,54,1091	0/0:27,0:27:81.25:0,81,1604
chr10	60029271	.	CTTT	C	953.08	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=2.321;DP=414;FS=23.026;HRun=12;HaplotypeScore=100.9665;InbreedingCoeff=0.8631;MQ=78.32;MQ0=3;MQRankSum=-3.904;QD=23.25;ReadPosRankSum=0.632;VQSLOD=0.6413;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:23:60.13:0,60,993	0/0:6,0:7:17.98:0,18,260	0/0:43,0:18:5.63:0,6,202	0/0:41,0:24:21.58:0,22,265	0/0:7,0:7:18.04:0,18,290	1/1:3,7:11:29.95:326,30,0	1/1:1,3:4:9.02:114,9,0	0/0:23,0:23:57.14:0,57,942	0/0:0,0:1:3.01:0,3,43	0/0:13,0:13:36.07:0,36,624	0/0:10,0:11:33.05:0,33,572	1/1:3,8:11:24.03:276,24,0	1/1:2,4:6:15.04:189,15,0	0/0:9,0:9:24:0,24,392	0/0:8,0:8:18.06:0,18,348	0/0:16,0:17:33.05:0,33,573	0/0:29,0:29:69.17:0,69,1228	0/0:4,0:15:38.90:0,39,509	0/0:23,0:24:42.11:0,42,712	0/0:9,0:10:26.95:0,27,376	0/0:7,0:7:21.07:0,21,412	1/1:0,2:2:3.01:38,3,0	1/1:0,3:3:9.03:114,9,0	1/1:1,3:4:5.60:75,6,0	0/0:16,0:17:30.04:0,30,516	0/0:20,0:23:60.13:0,60,1041	0/0:23,0:23:48.16:0,48,907	0/0:2,0:15:40.12:0,40,337
chr10	60029288	.	CATTTATTT	C	3960.12	PASS	AC=24;AF=0.545;AN=44;BaseQRankSum=-8.172;DP=327;FS=12.198;HRun=0;HaplotypeScore=105.4708;InbreedingCoeff=0.8310;MQ=60.25;MQ0=2;MQRankSum=-1.596;QD=25.88;ReadPosRankSum=0.859;VQSLOD=2.4105;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:19:33.11:0,33,952	0/0:3,0:7:9:0,9,95	./.	./.	./.	0/0:7,0:12:30.10:0,30,845	0/0:3,0:3:3.01:0,3,76	0/0:10,0:26:50.95:0,51,452	0/0:0,0:1:3.01:0,3,105	1/1:11,3:13:12.04:308,12,0	1/1:3,7:10:18.06:334,18,0	0/0:7,0:8:12.04:0,12,406	0/0:2,0:4:9.03:0,9,243	1/1:5,4:9:9.03:210,9,0	1/1:5,3:8:6.01:154,6,0	1/1:6,6:12:8.69:230,9,0	0/0:11,0:30:21.64:0,22,389	0/0:11,0:16:30.10:0,30,877	1/1:8,9:17:27.07:496,27,0	1/1:8,0:8:5.98:92,6,0	1/1:7,0:7:9.03:148,9,0	./.	./.	./.	1/1:5,10:15:15.05:362,15,0	1/1:8,12:20:39.10:733,39,0	1/1:7,12:19:23.73:594,24,0	1/1:12,2:14:15.05:298,15,0
chr10	60031307	.	TG	T	1157.35	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-4.713;DP=554;FS=4.045;HRun=2;HaplotypeScore=123.7890;InbreedingCoeff=0.9406;MQ=83.79;MQ0=2;MQRankSum=0.527;QD=17.54;ReadPosRankSum=-1.566;VQSLOD=3.3146;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:42.13:0,42,581	1/1:7,2:9:22.74:188,23,0	0/0:30,0:30:42.15:0,42,975	0/0:23,0:23:51.56:0,52,653	0/0:13,0:14:13.82:0,14,224	0/0:20,0:20:47.65:0,48,365	0/0:26,0:26:68.20:0,68,523	1/1:30,2:32:59.35:651,59,0	0/0:29,0:29:69.19:0,69,941	0/0:14,0:14:30.09:0,30,407	0/0:7,0:9:9.03:0,9,124	0/0:32,0:32:80.21:0,80,641	0/0:28,0:28:72.85:0,73,533	0/0:12,0:12:21.03:0,21,282	0/0:18,0:19:42.10:0,42,559	0/0:29,0:29:51.17:0,51,719	1/1:24,1:25:51.06:460,51,0	0/0:19,0:19:45.15:0,45,649	0/0:12,0:12:15.05:0,15,214	0/0:8,0:8:9.03:0,9,130	0/0:22,0:20:42.14:0,42,594	0/0:12,0:12:35.34:0,35,267	0/0:21,0:21:46.12:0,46,348	0/0:20,0:20:50.57:0,51,366	0/0:14,0:13:21.07:0,21,294	0/0:19,0:19:33.05:0,33,464	0/0:19,0:18:30.06:0,30,371	0/0:12,0:12:17.73:0,18,248
chr10	60031310	.	TGGG	T	4979.37	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=11.128;DP=530;FS=0.854;HRun=9;HaplotypeScore=124.1818;InbreedingCoeff=0.9544;MQ=88.03;MQ0=2;MQRankSum=-10.514;QD=32.12;ReadPosRankSum=6.591;VQSLOD=3.0932;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:20:18.05:0,18,241	0/0:9,0:9:24.06:0,24,345	0/0:28,0:30:74.31:0,74,1180	0/0:25,0:25:57.59:0,58,974	0/0:6,0:13:13.42:0,13,227	1/1:1,16:17:42.14:595,42,0	1/1:4,19:23:54.16:765,54,0	0/0:26,0:26:60.16:0,60,821	0/0:3,0:25:57.19:0,57,842	0/0:7,0:16:20.92:0,21,263	0/0:3,0:11:6.02:0,6,87	1/1:6,23:29:60.19:850,60,0	1/1:5,25:30:69.68:976,70,0	0/0:5,0:14:15.04:0,15,199	0/0:12,0:27:30.07:0,30,384	0/0:4,0:25:42.14:0,42,629	0/0:25,0:25:68.56:0,69,1000	0/0:3,0:18:42.14:0,42,634	0/0:2,0:7:15.03:0,15,205	0/0:1,0:4:9.03:0,9,131	0/0:5,0:23:27.09:0,27,391	1/1:2,13:15:30.10:425,30,0	1/1:4,17:21:48.02:651,48,0	1/1:1,19:20:51.17:718,51,0	0/0:4,0:9:14.93:0,15,189	0/0:0,0:15:39:0,39,559	0/0:6,0:17:21.03:0,21,264	0/0:3,0:12:24.91:0,25,298
chr10	60031950	.	T	TG	9530.44	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-15.479;DP=624;FS=0.000;HRun=4;HaplotypeScore=56.8570;InbreedingCoeff=0.9988;MQ=83.41;MQ0=0;MQRankSum=-2.153;QD=35.30;ReadPosRankSum=2.529;VQSLOD=5.2447;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,129,1463	0/0:6,0:6:18.05:0,18,204	0/0:25,0:25:69.08:0,69,760	0/0:13,0:13:38.99:0,39,411	0/0:22,0:22:60.15:0,60,667	0/0:34,0:34:99:0,99,1113	0/0:23,0:23:66.17:0,66,738	0/0:46,0:46:99:0,117,1319	0/0:13,0:13:36.10:0,36,408	1/1:1,21:22:63.20:843,63,0	1/1:3,22:25:60.20:819,60,0	0/0:13,0:13:36.10:0,36,408	0/0:16,0:16:48.12:0,48,534	1/1:1,16:17:48.14:640,48,0	1/1:5,27:32:69.23:944,69,0	1/1:6,23:29:69.22:928,69,0	0/0:21,0:21:63.18:0,63,715	0/0:13,0:13:39.11:0,39,442	1/1:4,24:28:72.22:967,72,0	1/1:0,17:17:51.17:697,51,0	1/1:1,26:27:75.25:1026,75,0	0/0:13,0:13:33.08:0,33,364	0/0:21,0:21:57.15:0,57,635	0/0:28,0:28:81.23:0,81,919	1/1:1,17:18:48.16:657,48,0	1/1:1,19:20:57.19:780,57,0	1/1:0,20:20:54.18:739,54,0	1/1:0,15:15:36.10:492,36,0
chr10	60032312	.	TTTC	T	2886.23	PASS	AB=1.000;AC=52;AF=0.929;AN=56;BaseQRankSum=-3.140;DP=285;FS=4.838;HRun=0;HaplotypeScore=37.3729;InbreedingCoeff=0.4438;MQ=72.15;MQ0=10;MQRankSum=-3.775;QD=11.73;ReadPosRankSum=0.908;VQSLOD=2.0170;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:18:35.93:300,36,0	0/1:1,0:1:0:0,0,0	0/0:39,0:11:12.35:0,12,154	0/1:34,0:8:2.06:2,0,26	1/1:1,7:8:9.39:63,9,0	1/1:1,0:1:2.97:20,3,0	1/1:12,0:12:35.58:251,36,0	1/1:15,0:13:24:211,24,0	1/1:2,0:2:6:54,6,0	1/1:9,0:9:14.11:117,14,0	1/1:7,0:7:8.77:53,9,0	1/1:12,0:12:29.69:202,30,0	1/1:6,0:6:11.91:87,12,0	1/1:3,0:3:5.97:48,6,0	1/1:2,0:2:3.90:44,4,0	1/1:4,0:4:9.37:73,9,0	1/1:16,0:16:38.94:334,39,0	1/1:7,0:7:17.89:138,18,0	1/1:12,0:10:20.65:185,21,0	1/1:5,0:5:4.41:29,4,0	1/1:8,0:8:13.25:110,13,0	1/1:6,0:6:14.84:100,15,0	1/1:5,0:5:14.90:114,15,0	1/1:16,0:16:30.20:218,30,0	1/1:8,0:8:7.35:28,7,0	1/1:8,0:8:13.73:112,14,0	1/1:8,0:8:15.15:100,15,0	1/1:13,0:13:1.82:5,2,0
chr10	60032314	.	TC	T	3402.66	PASS	AB=0.902;AC=53;AF=0.946;AN=56;BaseQRankSum=-2.684;DP=305;FS=0.000;HRun=1;HaplotypeScore=35.7343;InbreedingCoeff=0.3506;MQ=69.11;MQ0=10;MQRankSum=-3.958;QD=12.89;ReadPosRankSum=1.488;VQSLOD=2.1267;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:18,1:19:13.59:286,14,0	1/1:1,0:1:3:27,3,0	0/0:36,5:11:5.17:0,5,145	0/1:33,4:7:2.54:3,0,12	1/1:10,0:10:1.95:54,2,0	1/1:1,0:1:2.97:20,3,0	1/1:12,0:12:35.57:249,36,0	1/1:15,0:13:26.96:230,27,0	1/1:3,0:3:6:54,6,0	1/1:1,8:9:17.94:146,18,0	1/1:0,5:5:11.72:69,12,0	1/1:12,0:12:29.69:202,30,0	1/1:5,0:5:11.88:81,12,0	1/1:9,0:9:8.91:67,9,0	1/1:3,1:4:6.81:44,7,0	1/1:2,2:4:11.91:92,12,0	1/1:20,1:21:41.89:343,42,0	1/1:6,0:6:17.92:141,18,0	1/1:9,1:8:20.99:186,21,0	1/1:4,1:5:11.50:79,11,0	1/1:6,0:6:17.65:138,18,0	1/1:5,0:5:14.84:100,15,0	1/1:5,0:5:14.90:113,15,0	1/1:16,0:16:29.75:216,30,0	1/1:5,2:7:15.34:121,15,0	1/1:10,0:10:20.93:164,21,0	1/1:9,0:9:20.82:159,21,0	1/1:0,18:18:2.98:21,3,0
chr10	60033528	.	CCA	C	4153.22	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=14.216;DP=666;FS=0.000;HRun=0;HaplotypeScore=101.5114;InbreedingCoeff=0.9990;MQ=79.95;MQ0=1;MQRankSum=-5.088;QD=28.64;ReadPosRankSum=5.157;VQSLOD=5.1773;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:69.13:0,69,1065	0/0:7,0:7:21.07:0,21,359	0/0:32,0:28:46.39:0,46,1044	0/0:35,0:34:68.72:0,69,1170	0/0:26,0:26:78.09:0,78,1199	1/1:0,28:28:69.22:978,69,0	1/1:0,21:21:45.15:638,45,0	0/0:33,0:33:74.75:0,75,1096	0/0:21,0:21:60.21:0,60,1050	0/0:23,0:23:69.21:0,69,1133	0/0:19,0:19:54.13:0,54,869	1/1:1,15:16:33.08:468,33,0	1/1:2,17:19:38.83:501,39,0	0/0:29,0:29:87.06:0,87,1332	0/0:29,0:29:87.24:0,87,1398	0/0:18,0:18:54.16:0,54,891	0/0:33,0:33:99:0,99,1613	0/0:14,0:14:39.13:0,39,668	0/0:21,0:21:63.14:0,63,968	0/0:22,0:22:59.96:0,60,827	0/0:46,0:46:99:0,133,2110	1/1:1,22:23:45.15:638,45,0	1/1:2,17:19:38.90:547,39,0	1/1:1,18:19:27.07:383,27,0	0/0:28,0:28:78.24:0,78,1296	0/0:18,0:18:54.13:0,54,886	0/0:25,0:25:72.20:0,72,1188	0/0:17,0:17:45.15:0,45,791
chr10	60033530	.	A	AC	2039.92	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=14.394;DP=671;FS=0.000;HRun=9;HaplotypeScore=100.3907;InbreedingCoeff=0.9989;MQ=80.18;MQ0=1;MQRankSum=-2.210;QD=14.27;ReadPosRankSum=5.426;VQSLOD=3.4706;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:69.22:0,69,892	0/0:7,0:7:21.07:0,21,272	0/0:32,0:30:66.52:0,67,821	0/0:36,0:36:84.92:0,85,969	0/0:28,0:28:78.25:0,78,1007	1/1:28,0:28:68.79:554,69,0	1/1:21,0:21:44.66:335,45,0	0/0:30,0:30:75.23:0,75,952	0/0:21,0:21:63.19:0,63,804	0/0:26,0:26:69.22:0,69,884	0/0:19,0:19:54.08:0,54,662	1/1:15,1:16:30.27:229,30,0	1/1:17,2:19:38.49:314,38,0	0/0:29,0:29:84.18:0,84,1055	0/0:29,0:29:87.27:0,87,1113	0/0:18,0:18:54.18:0,54,700	0/0:33,0:33:96.31:0,96,1231	0/0:14,0:14:39.13:0,39,506	0/0:21,0:21:57.17:0,57,727	0/0:24,0:24:57.16:0,57,712	0/0:45,0:45:99:0,129,1637	1/1:22,1:23:42.11:311,42,0	1/1:17,1:18:39.09:284,39,0	1/1:18,0:18:26.91:213,27,0	0/0:29,0:29:78.25:0,78,1011	0/0:19,0:19:51.17:0,51,659	0/0:25,0:25:69.22:0,69,894	0/0:15,0:15:45.15:0,45,584
chr10	60034483	.	A	AGC	9137.91	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=13.867;DP=603;FS=1.657;HRun=0;HaplotypeScore=168.1615;InbreedingCoeff=0.9561;MQ=86.02;MQ0=0;MQRankSum=-11.349;QD=19.16;ReadPosRankSum=4.797;VQSLOD=5.2612;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:50,0:49:99:516,102,0	0/0:10,0:10:30.10:0,30,442	0/0:24,0:24:63.21:0,63,923	0/0:22,0:22:57.15:0,57,800	1/1:21,0:21:33.45:230,33,0	1/1:4,21:26:60.21:1050,60,0	1/1:8,19:27:60.21:1044,60,0	0/0:33,0:33:96.32:0,96,1394	1/1:17,0:16:37.07:170,37,0	1/1:12,0:12:19.71:89,20,0	1/1:17,0:17:33.08:189,33,0	1/1:2,17:19:51.17:886,51,0	1/1:2,16:19:48.16:826,48,0	1/1:19,0:19:47:282,47,0	1/1:25,0:25:49.89:233,50,0	1/1:30,0:30:70.90:359,71,0	0/0:37,0:37:99:0,111,1627	1/1:17,0:16:36.76:159,37,0	1/1:21,0:20:10.48:90,10,0	1/1:18,0:18:45.57:264,46,0	1/1:35,0:35:59.47:262,59,0	1/1:2,21:23:60.21:1062,60,0	1/1:4,7:11:15.05:259,15,0	1/1:0,16:16:36.12:634,36,0	1/1:10,0:10:21.78:126,22,0	1/1:21,0:21:11.06:109,11,0	1/1:19,0:19:44.87:274,45,0	1/1:4,0:4:7:25,7,0
chr10	60034487	.	A	AGC	22395.83	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=13.512;DP=566;FS=5.172;HRun=0;HaplotypeScore=106.6602;InbreedingCoeff=0.9823;MQ=86.14;MQ0=0;MQRankSum=-11.506;QD=51.02;ReadPosRankSum=6.205;VQSLOD=5.3364;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,49:50:99:2615,129,0	0/0:10,0:10:30.10:0,30,490	0/0:22,0:22:66.20:0,66,1026	0/0:21,0:21:60.20:0,60,945	1/1:0,19:20:45.15:891,45,0	1/1:17,0:17:51.17:927,51,0	1/1:19,0:19:54.18:998,54,0	0/0:36,0:36:99:0,108,1675	1/1:1,15:17:42.14:853,42,0	1/1:0,12:13:39.12:756,39,0	1/1:0,15:16:36.12:730,36,0	1/1:18,0:18:51.17:943,51,0	1/1:15,0:15:45.15:843,45,0	1/1:1,17:18:48.16:971,48,0	1/1:0,22:23:60.21:1218,60,0	1/1:0,26:26:75.26:1522,75,0	0/0:38,0:38:99:0,114,1848	1/1:0,19:18:48.16:975,48,0	1/1:1,19:19:54.10:1018,54,0	1/1:2,17:19:45.15:910,45,0	1/1:2,29:33:75.26:1502,75,0	1/1:20,0:20:60.21:1109,60,0	1/1:7,0:7:15.05:273,15,0	1/1:16,0:16:39.09:692,39,0	1/1:0,11:11:24.08:485,24,0	1/1:0,17:17:51.18:1036,51,0	1/1:7,14:21:48.16:948,48,0	1/1:0,3:3:9.03:183,9,0
chr10	60034911	.	G	GA	1446.61	PASS	AB=0.835;AC=8;AF=0.143;AN=56;BaseQRankSum=-0.086;DP=441;FS=2.526;HRun=10;HaplotypeScore=68.1123;InbreedingCoeff=0.6927;MQ=57.19;MQ0=11;MQRankSum=-3.145;QD=13.15;ReadPosRankSum=0.917;VQSLOD=3.7099;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,16:34:66.95:645,67,0	0/0:7,0:7:17.97:0,18,148	0/0:26,0:13:27.26:0,27,205	0/1:26,0:12:1.91:2,0,70	1/1:4,15:19:42.57:436,43,0	0/0:15,0:15:19.22:0,19,150	0/0:10,0:8:14.52:0,15,112	0/0:20,0:18:41.92:0,42,342	1/1:7,2:9:18.02:176,18,0	0/0:20,0:20:43.74:0,44,363	0/0:17,0:17:26.54:0,27,205	0/0:11,0:8:2.78:0,3,24	0/0:14,0:14:11.98:0,12,98	0/0:10,1:10:17.35:0,17,132	0/0:18,0:18:35.14:0,35,258	0/0:7,0:7:14.98:0,15,123	0/0:24,0:23:54.38:0,54,426	0/1:11,8:19:2.22:334,0,2	0/0:23,0:22:36.35:0,36,289	0/0:12,0:12:32.95:0,33,271	0/0:7,0:7:14.72:0,15,110	0/0:4,0:4:5.67:0,6,28	0/0:4,0:4:5.97:0,6,46	0/0:14,0:13:8.85:0,9,68	0/0:15,0:15:30.39:0,30,242	0/0:14,0:14:38.90:0,39,313	0/0:23,0:23:44.75:0,45,348	0/0:15,0:15:31.06:0,31,250
chr10	60034931	.	T	TA	5252.83	PASS	AB=0.800;AC=48;AF=0.857;AN=56;BaseQRankSum=-4.917;DP=441;FS=24.082;HRun=11;HaplotypeScore=66.6518;InbreedingCoeff=0.3539;MQ=61.88;MQ0=6;MQRankSum=0.235;QD=13.54;ReadPosRankSum=0.575;VQSLOD=3.0174;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:11,17:28:4.57:297,0,5	1/1:5,1:7:11.34:64,11,0	0/0:26,0:14:6.78:0,7,55	0/0:27,0:14:13.88:0,14,105	1/1:8,12:21:33.32:287,33,0	1/1:2,0:13:5.68:29,6,0	0/1:8,0:7:23.70:32,0,24	1/1:6,1:36:80.93:422,81,0	1/1:2,5:7:18.04:183,18,0	1/1:2,16:19:39.11:401,39,0	1/1:4,8:13:28.71:263,29,0	0/1:9,0:6:3.80:14,0,4	1/1:2,0:13:6.27:34,6,0	1/1:4,6:10:24.04:238,24,0	1/1:2,12:14:30.06:305,30,0	1/1:3,6:9:15.03:152,15,0	1/1:3,0:23:46.34:230,46,0	1/1:7,14:21:19.20:321,19,0	1/1:9,9:18:14.87:318,15,0	1/1:2,9:12:26.89:258,27,0	1/1:1,5:6:15.03:152,15,0	1/1:1,0:4:8.52:43,9,0	0/1:2,1:7:5.74:31,0,6	1/1:3,0:11:2.96:19,3,0	1/1:2,12:14:30.06:303,30,0	1/1:4,11:15:23.99:226,24,0	1/1:4,19:25:25.11:416,25,0	1/1:4,16:20:21.04:213,21,0
chr10	60035006	.	TTA	T	1597.16	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=2.724;DP=376;FS=9.036;HRun=0;HaplotypeScore=66.5586;InbreedingCoeff=0.9410;MQ=79.78;MQ0=4;MQRankSum=-8.869;QD=26.62;ReadPosRankSum=0.488;VQSLOD=3.8186;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:45.15:0,45,725	0/0:14,0:13:39.13:0,39,730	0/0:23,0:11:20.01:0,20,305	0/0:21,0:17:23.39:0,23,245	0/0:20,0:20:51.17:0,51,900	1/1:4,10:14:39.07:513,39,0	1/1:2,13:15:18.06:272,18,0	0/0:19,0:19:51.13:0,51,880	0/0:10,0:10:24.08:0,24,423	0/0:14,0:14:36.12:0,36,611	0/0:10,0:10:27.09:0,27,483	1/1:1,8:9:24.08:338,24,0	1/1:3,5:7:18.03:246,18,0	0/0:14,0:14:39.13:0,39,707	0/0:15,0:15:45.07:0,45,742	0/0:9,0:9:27.09:0,27,483	0/0:25,0:25:50.18:0,50,1054	0/0:20,0:20:40.39:0,40,703	0/0:12,0:12:17.34:0,17,524	0/0:13,0:13:39.13:0,39,715	0/0:3,0:3:5.94:0,6,114	1/1:0,2:2:6.02:89,6,0	1/1:3,1:4:8.97:93,9,0	1/1:1,7:7:18.05:236,18,0	0/0:8,0:8:21.07:0,21,398	0/0:10,0:10:30.10:0,30,555	0/0:21,0:21:44.16:0,44,785	0/0:17,0:17:33.11:0,33,609
chr10	60035007	.	TA	T	1045.14	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=4.356;DP=376;FS=5.018;HRun=1;HaplotypeScore=62.4411;InbreedingCoeff=0.9417;MQ=77.76;MQ0=4;MQRankSum=-8.568;QD=17.42;ReadPosRankSum=1.230;VQSLOD=3.9233;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:45.13:0,45,564	0/0:14,0:13:39.13:0,39,581	0/0:22,1:11:22.14:0,22,206	0/0:18,1:15:26.27:0,26,189	0/0:20,0:20:51.15:0,51,667	1/1:14,0:15:38.97:357,39,0	1/1:14,1:15:21.03:205,21,0	0/0:20,0:20:54.08:0,54,738	0/0:10,0:10:24.08:0,24,338	0/0:14,0:14:36.09:0,36,474	0/0:10,0:10:27.05:0,27,375	1/1:8,0:8:24.02:217,24,0	1/1:8,0:7:17.99:159,18,0	0/0:14,0:14:39.06:0,39,532	0/0:15,1:16:39.21:0,39,562	0/0:9,0:9:27.08:0,27,373	0/0:24,1:25:38.90:0,39,673	0/0:19,0:19:28.43:0,28,515	0/0:12,0:12:16.43:0,16,419	0/0:14,0:14:39.09:0,39,531	0/0:3,0:3:5.94:0,6,89	1/1:2,0:2:6.01:56,6,0	1/1:3,1:4:8.97:74,9,0	1/1:8,0:7:18.01:167,18,0	0/0:8,0:8:21.07:0,21,320	0/0:10,0:10:30.07:0,30,420	0/0:21,0:21:45.07:0,45,607	0/0:17,0:17:33.10:0,33,439
chr10	60035011	.	TAA	T	598.47	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=1.207;DP=433;FS=15.173;HRun=16;HaplotypeScore=76.8198;InbreedingCoeff=0.8778;MQ=72.81;MQ0=4;MQRankSum=2.124;QD=8.43;ReadPosRankSum=3.458;VQSLOD=0.0339;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,12:20:6.01:225,6,0	0/0:14,0:14:36.09:0,36,434	0/0:23,0:10:16.54:0,17,132	0/0:17,0:14:11.21:0,11,89	1/1:8,11:21:17.35:178,17,0	0/0:18,0:22:58.74:0,59,517	0/0:17,0:17:25.17:0,25,149	0/0:23,0:24:50.66:0,51,572	1/1:4,6:10:11.93:100,12,0	0/0:13,0:15:31.78:0,32,336	0/0:11,0:11:26.99:0,27,315	0/0:11,0:12:31.68:0,32,228	0/0:10,0:9:19.89:0,20,132	0/0:15,0:15:36.01:0,36,369	0/0:15,0:17:46.83:0,47,514	0/0:8,0:10:23.41:0,23,255	0/0:19,0:28:54.92:0,55,367	1/1:12,6:20:32.25:244,32,0	0/0:15,0:16:26.97:0,27,256	0/0:14,0:16:35.42:0,35,392	0/0:4,0:4:6.88:0,7,63	0/0:5,0:5:11.77:0,12,115	0/0:6,0:7:14.82:0,15,121	0/0:7,0:8:10.26:0,10,89	0/0:10,0:10:24.06:0,24,289	0/0:13,0:14:26.41:0,26,282	0/0:23,0:25:56.40:0,56,619	0/0:16,0:16:8.99:0,9,86
chr10	60038366	.	TG	T	1175.56	PASS	AB=0.990;AC=18;AF=0.321;AN=56;BaseQRankSum=1.901;DP=560;FS=100.975;HRun=1;HaplotypeScore=81.6857;InbreedingCoeff=0.5714;MQ=65.29;MQ0=0;MQRankSum=-3.958;QD=7.17;ReadPosRankSum=-6.346;VQSLOD=-0.5499;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,4:24:58.77:0,59,559	0/0:10,0:10:28.66:0,29,174	0/0:18,0:10:23.32:0,23,186	0/0:11,0:8:10.74:0,11,101	0/0:37,0:37:20.78:0,21,710	1/1:20,0:20:51.61:372,52,0	1/1:12,0:12:32.82:241,33,0	0/0:24,0:24:48.63:0,49,353	0/0:26,0:26:68.73:0,69,659	0/0:22,0:22:6.41:0,6,189	0/1:17,0:17:24.04:24,0,59	1/1:11,0:11:27.14:161,27,0	1/1:11,2:13:31.18:225,31,0	0/1:25,0:25:14.68:15,0,67	0/0:30,0:30:16.76:0,17,113	0/0:20,0:20:21.54:0,22,97	0/0:48,0:48:67.57:0,68,494	0/0:17,0:17:30.19:0,30,320	0/1:21,0:21:14.23:14,0,50	0/1:22,1:23:13.89:14,0,72	0/0:7,0:7:7.86:0,8,53	1/1:3,1:4:4.56:43,5,0	1/1:11,0:11:28.06:191,28,0	1/1:7,0:7:8.80:67,9,0	0/0:22,0:22:10.65:0,11,115	0/0:47,0:47:19.20:0,19,407	0/0:25,0:25:7.41:0,7,122	0/0:8,0:8:1.62:0,2,9
chr10	60038367	.	GT	G	3577.35	PASS	AB=0.974;AC=28;AF=0.500;AN=56;BaseQRankSum=-2.417;DP=559;FS=1.758;HRun=13;HaplotypeScore=74.2158;InbreedingCoeff=0.6476;MQ=65.29;MQ0=0;MQRankSum=2.871;QD=11.32;ReadPosRankSum=3.844;VQSLOD=3.6802;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:41.41:0,41,432	0/0:3,0:10:22.89:0,23,129	0/1:18,0:10:15.10:15,0,33	0/0:11,0:8:2.96:0,3,19	0/0:34,1:36:57.89:0,58,660	0/0:21,0:21:11.49:0,11,147	0/0:12,0:12:2.13:0,2,70	0/0:13,0:25:43.81:0,44,264	0/0:24,2:27:34.08:0,34,624	1/1:7,14:21:26.48:196,26,0	1/1:4,13:17:8.70:249,9,0	0/0:11,0:11:16.65:0,17,118	0/1:13,0:13:5.14:5,0,63	1/1:4,21:25:47.48:342,47,0	1/1:2,26:29:76.60:552,77,0	1/1:2,17:20:11.64:239,12,0	0/0:9,0:48:76.21:0,76,403	0/1:15,2:17:2.42:2,0,270	1/1:6,14:21:37.27:250,37,0	1/1:5,18:23:41.62:300,42,0	1/1:2,5:7:11.92:88,12,0	0/1:4,0:4:12.20:12,0,22	0/0:11,0:11:5.62:0,6,58	0/0:7,0:7:2.52:0,3,14	1/1:5,15:21:37.81:268,38,0	1/1:17,29:47:69.05:565,69,0	1/1:6,18:25:46.71:334,47,0	1/1:0,7:8:22.92:159,23,0
chr10	60038653	.	G	GCACA	930.48	PASS	AB=1.000;AC=26;AF=0.500;AN=52;BaseQRankSum=-1.285;DP=582;FS=3.715;HRun=0;HaplotypeScore=117.5483;InbreedingCoeff=0.5016;MQ=76.55;MQ0=10;MQRankSum=-0.742;QD=3.20;ReadPosRankSum=-0.918;VQSLOD=2.3204;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:29:11.57:188,12,0	0/0:9,0:9:6:0,6,71	./.	./.	0/1:15,0:15:0:0,0,0	1/1:16,1:16:8.84:182,9,0	1/1:24,1:28:3.90:72,4,0	0/1:19,0:19:0:0,0,0	0/1:12,0:12:0:0,0,0	1/1:8,0:8:0.47:1,0,0	0/0:19,0:19:2.95:0,3,19	1/1:14,6:21:5.75:82,6,0	0/1:10,0:10:13.46:52,0,13	0/1:19,0:19:0:0,0,0	0/0:19,0:20:6.01:0,6,73	0/0:20,0:24:19.47:0,19,191	0/0:32,0:31:11.66:0,12,164	1/1:11,3:18:8.76:110,9,0	1/1:17,0:17:0.47:1,0,0	0/0:19,0:17:6.01:0,6,91	0/0:43,0:43:2.65:0,3,45	1/1:12,0:12:6:74,6,0	0/1:8,0:8:0:0,0,0	1/1:37,2:39:20.80:284,21,0	0/0:11,0:11:2.31:0,2,44	1/1:17,0:17:5.28:31,5,0	0/0:18,0:18:8.38:0,8,100	0/0:16,0:16:12.01:0,12,142
chr10	60039501	.	CATATATATATATATAT	C	1284.66	PASS	AB=1.000;AC=9;AF=0.375;AN=24;BaseQRankSum=2.079;DP=166;FS=0.000;HRun=0;HaplotypeScore=72.9400;InbreedingCoeff=0.5101;MQ=91.56;MQ0=4;MQRankSum=-1.392;QD=23.36;ReadPosRankSum=1.320;VQSLOD=1.5585;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:5:3.01:0,3,110	./.	0/1:16,0:12:7.16:24,0,7	0/0:18,0:12:6.90:0,7,98	./.	1/1:7,3:9:12.04:362,12,0	./.	0/0:7,0:7:9.03:0,9,198	./.	./.	./.	1/1:7,4:9:9.03:399,9,0	1/1:6,11:17:15:477,15,0	./.	./.	./.	0/0:6,0:7:6.02:0,6,247	0/0:4,0:8:15.05:0,15,612	./.	0/0:3,0:3:2.60:0,3,10	./.	1/1:0,1:1:3.01:133,3,0	./.	./.	./.	./.	./.	0/0:0,0:1:3.01:0,3,210
chr10	60039557	.	AAGAGAGAGAGAGAGAGAGAGAGAGAGAG	A	1298.14	PASS	AB=0.649;AC=10;AF=0.250;AN=40;BaseQRankSum=3.767;DP=186;FS=30.276;HRun=0;HaplotypeScore=110.2197;InbreedingCoeff=0.1334;MQ=76.56;MQ0=14;MQRankSum=-3.692;QD=25.96;ReadPosRankSum=3.077;VQSLOD=0.5053;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:4:6.49:0,6,450	0/0:3,0:3:6.02:0,6,590	./.	0/0:32,0:10:2.95:0,3,71	0/0:5,0:8:12.98:0,13,714	0/1:4,0:10:21.98:386,0,22	./.	0/0:18,0:17:39.13:0,39,2704	0/0:4,0:4:3.01:0,3,173	0/0:3,0:3:0:0,0,0	1/1:1,6:6:3.01:133,3,0	0/1:4,0:6:28.81:206,0,29	0/1:3,0:6:58.95:332,0,59	./.	0/0:2,0:1:2.04:0,2,6	./.	0/0:8,0:8:17.80:0,18,1424	0/0:10,0:10:14.26:0,14,749	./.	1/1:0,8:8:3.01:136,3,0	0/0:5,0:4:1.25:0,1,3	1/1:3,0:3:2.22:7,2,0	0/0:6,0:3:3.01:0,3,36	./.	./.	./.	0/0:1,0:1:0.89:0,1,2	0/1:2,8:10:11.45:211,0,11
chr10	60040562	.	TG	T	2748.78	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.481;DP=711;FS=8.137;HRun=4;HaplotypeScore=70.5387;InbreedingCoeff=0.9999;MQ=88.01;MQ0=0;MQRankSum=-1.062;QD=31.24;ReadPosRankSum=-2.276;VQSLOD=2.9531;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,114,1558	1/1:0,20:20:57.17:684,57,0	0/0:29,0:28:47.04:0,47,922	0/0:26,0:26:60.07:0,60,735	0/0:25,0:25:69.22:0,69,948	0/0:15,0:15:36.11:0,36,488	0/0:24,0:24:72.23:0,72,989	1/1:2,36:38:99:1273,108,0	0/0:23,0:23:66.21:0,66,908	0/0:25,0:25:66.20:0,66,876	0/0:22,0:22:63.19:0,63,848	0/0:22,0:22:66.19:0,66,888	0/0:23,0:23:66.22:0,66,917	0/0:25,0:25:75.25:0,75,1048	0/0:38,0:38:99:0,114,1579	0/0:31,0:31:90.28:0,90,1241	1/1:0,30:30:78.24:936,78,0	0/0:20,0:20:57.19:0,57,798	0/0:22,0:22:63.19:0,63,861	0/0:21,0:21:63.21:0,63,880	0/0:33,0:33:90.25:0,90,1204	0/0:23,0:23:69.23:0,69,962	0/0:21,0:21:63.18:0,63,835	0/0:21,0:21:63.19:0,63,864	0/0:23,0:23:69.21:0,69,929	0/0:24,0:24:72.22:0,72,978	0/0:29,0:29:75.25:0,75,1050	0/0:16,0:16:39.11:0,39,528
chr10	60044120	.	AAAACCAAACCAAACCAAGCC	A	1414.29	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=8.045;DP=613;FS=0.814;HRun=0;HaplotypeScore=289.0267;InbreedingCoeff=0.8421;MQ=61.08;MQ0=8;MQRankSum=-6.029;QD=18.61;ReadPosRankSum=-3.439;VQSLOD=1.3688;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:43:99:0,111,5455	1/1:4,7:11:8.84:459,9,0	0/0:29,0:11:18.06:0,18,451	0/0:34,0:20:6.43:0,6,497	0/0:15,0:15:30.10:0,30,1289	0/0:11,0:11:24.08:0,24,1011	0/0:28,0:27:60.21:0,60,2815	1/1:10,13:23:39.12:641,39,0	0/0:18,0:18:48.16:0,48,2033	0/0:24,0:24:63.22:0,63,3296	0/0:11,0:11:27.09:0,27,1244	0/0:19,0:19:45.15:0,45,2004	0/0:10,0:10:27.09:0,27,1099	0/0:21,0:21:45.15:0,45,2015	0/0:30,0:30:84.29:0,84,4472	0/0:27,0:27:72.25:0,72,3396	1/1:12,17:29:14.84:447,15,0	0/0:32,0:32:75.73:0,76,3962	0/0:16,0:15:27.09:0,27,1150	0/0:16,0:16:33.11:0,33,1572	0/0:31,0:31:81.28:0,81,3883	0/0:11,0:11:30.10:0,30,1402	0/0:8,0:8:18.06:0,18,958	0/0:44,0:44:99:0,111,5543	0/0:10,0:10:18.06:0,18,1234	0/0:22,0:22:60.20:0,60,2769	0/0:26,0:26:69.24:0,69,3672	0/1:13,0:13:0.55:1,0,1278
chr10	60044193	.	GCCAAA	G	923.84	PASS	AC=26;AF=0.867;AN=30;BaseQRankSum=-1.733;DP=687;FS=4.437;HRun=0;HaplotypeScore=134.4190;InbreedingCoeff=0.2268;MQ=66.49;MQ0=25;MQRankSum=0.706;QD=2.71;ReadPosRankSum=1.348;VQSLOD=2.2632;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:44,0:43:2.99:23,3,0	1/1:12,1:13:3:51,3,0	./.	./.	1/1:14,0:14:3.01:51,3,0	./.	./.	./.	1/1:12,6:18:12.04:203,12,0	1/1:25,0:24:1.25:3,1,0	./.	./.	./.	1/1:19,0:25:3.01:35,3,0	1/1:27,0:30:3.01:35,3,0	1/1:23,0:26:5.99:57,6,0	1/1:23,4:27:18.06:298,18,0	1/1:24,3:27:11.68:159,12,0	1/1:21,0:20:3.01:41,3,0	./.	1/1:45,0:45:2.92:8,3,0	./.	0/0:12,0:14:0.47:0,0,1	0/0:30,0:29:2.60:0,3,10	./.	./.	1/1:26,0:26:3.01:41,3,0	./.
chr10	60047808	.	TC	T	10730.96	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=12.442;DP=763;FS=3.950;HRun=3;HaplotypeScore=79.6280;InbreedingCoeff=0.9994;MQ=90.21;MQ0=0;MQRankSum=-1.203;QD=33.85;ReadPosRankSum=3.960;VQSLOD=5.4722;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,163,2329	0/0:7,0:7:21.07:0,21,302	0/0:27,0:28:70.43:0,70,880	0/0:40,0:38:75.73:0,76,1187	0/0:27,0:27:81.26:0,81,1148	0/0:20,0:20:60.19:0,60,845	0/0:31,0:31:93.29:0,93,1303	0/0:35,0:35:99:0,102,1419	0/0:23,0:23:69.23:0,69,993	1/1:0,29:29:87.27:1077,87,0	1/1:0,27:27:78.25:967,78,0	0/0:33,0:33:93.31:0,93,1339	0/0:31,0:31:87.29:0,87,1221	1/1:0,24:24:66.21:817,66,0	1/1:2,26:28:72.23:891,72,0	1/1:1,25:26:72.23:893,72,0	0/0:33,0:33:96.32:0,96,1380	0/0:16,0:16:45.15:0,45,647	1/1:2,22:24:66.17:791,66,0	1/1:0,19:19:45.14:557,45,0	1/1:2,28:30:75.24:930,75,0	0/0:26,0:26:78.25:0,78,1090	0/0:18,0:18:54.18:0,54,771	0/0:23,0:23:69.21:0,69,968	1/1:2,34:36:96.30:1185,96,0	1/1:0,32:32:96.30:1190,96,0	1/1:1,29:30:84.22:1024,84,0	1/1:0,12:12:33.10:409,33,0
chr10	60049068	.	G	GA	1482.54	PASS	AB=0.859;AC=29;AF=0.518;AN=56;BaseQRankSum=-2.255;DP=464;FS=7.562;HRun=14;HaplotypeScore=60.1131;InbreedingCoeff=0.3100;MQ=62.79;MQ0=6;MQRankSum=0.148;QD=5.29;ReadPosRankSum=-2.979;VQSLOD=1.1538;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:37:69.39:0,69,430	0/0:2,0:3:4.47:0,4,23	0/1:18,0:9:14.55:15,0,46	0/1:23,0:10:5.76:6,0,13	0/0:15,0:15:31.51:0,32,196	0/0:21,0:21:35.77:0,36,231	0/1:13,4:17:26.13:26,0,104	0/0:39,0:40:23.61:0,24,282	0/1:9,0:9:8.61:9,0,78	1/1:5,8:14:0.47:154,0,0	1/1:4,6:10:15:132,15,0	0/0:8,0:10:16.26:0,16,78	0/0:12,0:12:27.34:0,27,160	1/1:2,7:9:6:53,6,0	0/1:4,10:14:7.13:67,0,7	0/1:1,4:5:13.27:20,0,13	0/1:32,1:34:2.77:3,0,329	0/0:21,1:23:6.24:0,6,254	1/1:13,6:19:8.53:187,9,0	1/1:14,6:19:36.24:291,36,0	1/1:5,2:9:4.51:65,5,0	0/1:10,0:11:6.78:7,0,66	0/1:9,3:13:30.43:30,0,65	0/0:17,0:20:37.37:0,37,236	1/1:9,1:11:26.03:188,26,0	1/1:0,10:10:20.84:180,21,0	1/1:3,15:18:21.46:182,21,0	1/1:4,10:14:6:53,6,0
chr10	60049448	.	C	CA	11244.24	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=9.896;DP=629;FS=3.998;HRun=6;HaplotypeScore=75.9469;InbreedingCoeff=0.9938;MQ=76.49;MQ0=0;MQRankSum=-3.353;QD=37.48;ReadPosRankSum=2.269;VQSLOD=3.0268;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,108,1354	0/0:6,0:6:18.02:0,18,212	0/0:23,0:23:66.13:0,66,790	0/0:18,0:18:50.89:0,51,609	0/0:20,0:20:51.17:0,51,661	0/0:27,0:27:78.25:0,78,1012	0/0:27,0:27:81.25:0,81,1030	0/0:34,0:34:93.27:0,93,1167	0/0:24,0:24:72.23:0,72,934	1/1:0,27:27:81.24:1154,81,0	1/1:0,16:16:39.13:584,39,0	0/0:21,0:21:63.19:0,63,801	0/0:20,0:20:57.12:0,57,691	1/1:2,15:17:45.11:641,45,0	1/1:3,29:32:69.19:1009,69,0	1/1:1,39:40:54.15:1309,54,0	0/0:26,0:26:78.23:0,78,995	0/0:13,0:13:39.13:0,39,506	1/1:1,21:22:66.22:978,66,0	1/1:3,19:22:51.17:744,51,0	1/1:1,31:32:75.25:1124,75,0	0/0:4,0:4:12.04:0,12,156	0/0:7,0:7:21.07:0,21,273	0/0:23,0:23:69.20:0,69,878	1/1:0,10:10:27.09:404,27,0	1/1:3,25:28:78.25:1140,78,0	1/1:3,36:39:99:1528,102,0	1/1:0,15:15:42.14:629,42,0
chr10	60050548	.	TG	T	13378.09	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=15.913;DP=761;FS=2.988;HRun=1;HaplotypeScore=79.6541;InbreedingCoeff=0.9997;MQ=82.79;MQ0=0;MQRankSum=-2.918;QD=39.00;ReadPosRankSum=2.837;VQSLOD=5.6421;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,123,1930	0/0:11,0:11:33.11:0,33,523	0/0:28,0:29:83.60:0,84,1179	0/0:22,0:21:25.70:0,26,628	0/0:22,0:22:66.22:0,66,1050	0/0:34,0:34:99:0,102,1584	0/0:27,0:27:81.24:0,81,1237	0/0:30,0:30:87.26:0,87,1304	0/0:20,0:20:60.20:0,60,957	1/1:0,22:22:66.20:886,66,0	1/1:0,19:19:54.18:755,54,0	0/0:24,1:25:33.29:0,33,1101	0/0:31,0:31:93.32:0,93,1485	1/1:0,33:33:90.30:1259,90,0	1/1:0,37:37:99:1427,102,0	1/1:0,40:40:99:1552,111,0	0/0:30,0:30:90.31:0,90,1439	0/0:22,0:22:66.23:0,66,1055	1/1:1,18:19:52.93:727,53,0	1/1:0,29:29:78.26:1088,78,0	1/1:0,63:63:99:2476,178,0	0/0:25,0:25:75.24:0,75,1174	0/0:18,0:18:54.17:0,54,840	0/0:31,0:31:93.32:0,93,1485	1/1:0,16:16:45.15:629,45,0	1/1:0,30:30:90.28:1236,90,0	1/1:0,24:24:63.21:881,63,0	1/1:0,11:11:33.11:461,33,0
chr10	60050763	.	G	GA	12136.80	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-17.296;DP=634;FS=1.676;HRun=2;HaplotypeScore=54.6581;InbreedingCoeff=0.9991;MQ=76.05;MQ0=0;MQRankSum=-2.352;QD=40.59;ReadPosRankSum=4.052;VQSLOD=5.0900;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:90.25:0,90,1136	0/0:8,0:8:24.08:0,24,312	0/0:13,0:13:39.11:0,39,485	0/0:13,0:13:36.12:0,36,465	0/0:32,0:32:96.31:0,96,1246	0/0:26,0:26:78.25:0,78,1012	0/0:21,0:20:63.20:0,63,817	0/0:30,0:30:84.27:0,84,1079	0/0:15,0:15:45.15:0,45,584	1/1:0,26:27:81.26:1186,81,0	1/1:0,29:29:87.29:1304,87,0	0/0:18,0:18:54.16:0,54,687	0/0:19,0:19:57.19:0,57,739	1/1:1,19:20:51.17:764,51,0	1/1:1,25:26:63.21:944,63,0	1/1:0,26:26:72.24:1079,72,0	0/0:27,0:27:78.24:0,78,995	0/0:18,0:18:54.13:0,54,677	1/1:0,18:18:54.15:785,54,0	1/1:2,34:36:99:1460,99,0	1/1:0,9:9:21.07:315,21,0	0/0:27,0:27:78.23:0,78,984	0/0:18,0:18:51.15:0,51,647	0/0:18,0:18:51.17:0,51,662	1/1:2,27:29:69.23:1026,69,0	1/1:1,35:35:99:1519,105,0	1/1:1,28:29:78.26:1169,78,0	1/1:0,14:14:39.13:585,39,0
chr10	60051278	.	ATTTT	A	785.05	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-1.467;DP=474;FS=2.695;HRun=17;HaplotypeScore=94.3099;InbreedingCoeff=0.9110;MQ=53.38;MQ0=13;MQRankSum=-3.229;QD=12.08;ReadPosRankSum=2.430;VQSLOD=0.2144;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:30:51.64:0,52,881	1/1:4,5:9:14.95:190,15,0	0/0:14,0:7:9.03:0,9,136	0/0:14,0:9:20.94:0,21,225	0/0:13,0:13:27.09:0,27,468	0/0:10,0:12:30.02:0,30,393	0/0:15,0:15:29.96:0,30,373	1/1:19,11:28:30.52:347,31,0	0/0:8,0:7:15.05:0,15,279	0/0:29,0:32:72.16:0,72,1238	0/0:10,0:11:21.07:0,21,407	0/0:13,0:12:18.31:0,18,191	0/0:7,0:7:12.44:0,12,133	0/0:7,0:7:6.02:0,6,99	0/0:17,0:17:42.13:0,42,645	0/0:17,0:16:24.53:0,25,381	1/1:6,17:23:32.91:388,33,0	0/0:35,0:36:63.21:0,63,1180	0/0:16,0:15:30.09:0,30,470	0/0:19,0:22:45.15:0,45,781	0/0:6,0:6:17.95:0,18,252	0/0:12,0:12:29.84:0,30,324	0/0:7,0:9:20.83:0,21,214	0/0:18,0:19:18.90:0,19,213	0/0:11,0:13:30.10:0,30,436	0/0:24,0:24:66.16:0,66,1090	0/0:9,0:13:27.51:0,28,374	0/0:16,0:16:33.11:0,33,649
chr10	60051297	.	GTTCT	G	1755.71	PASS	AB=0.867;AC=17;AF=0.304;AN=56;BaseQRankSum=-5.157;DP=460;FS=13.826;HRun=0;HaplotypeScore=91.8052;InbreedingCoeff=0.1339;MQ=48.20;MQ0=32;MQRankSum=0.406;QD=8.96;ReadPosRankSum=-2.420;VQSLOD=0.7418;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:28:47.52:0,48,1044	0/0:6,0:6:18.06:0,18,295	0/1:4,0:2:0:0,0,0	0/0:8,0:6:11.91:0,12,143	0/0:19,0:18:42.06:0,42,1005	0/1:3,7:9:58.51:251,0,59	0/1:11,6:15:84.19:253,0,84	0/0:21,0:17:45.10:0,45,845	0/0:12,0:11:27.09:0,27,712	0/1:22,0:25:88.34:88,0,787	0/1:8,0:7:2.14:2,0,200	1/1:5,5:9:20.79:298,21,0	1/1:4,8:11:10.92:137,11,0	0/0:9,0:8:15.05:0,15,248	0/0:23,0:23:1.48:0,1,730	0/0:19,0:16:39.01:0,39,604	0/0:24,0:22:53.61:0,54,859	0/0:39,0:36:68.43:0,68,1531	0/1:15,0:10:6.80:7,0,239	0/0:21,0:21:27.71:0,28,695	0/1:6,0:4:10.95:11,0,61	0/1:6,11:14:99:245,0,140	0/1:4,8:11:55.82:229,0,56	1/1:3,16:18:12.49:329,12,0	0/0:18,0:15:14.15:0,14,635	0/1:25,0:21:2.45:2,0,593	0/0:14,0:14:16.61:0,17,531	0/1:16,0:14:65.77:66,0,291
chr10	60051490	.	ACC	A	6395.51	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=12.502;DP=415;FS=3.428;HRun=6;HaplotypeScore=84.5495;InbreedingCoeff=0.9745;MQ=59.50;MQ0=6;MQRankSum=-3.812;QD=34.57;ReadPosRankSum=0.502;VQSLOD=4.6429;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:87.30:0,87,1553	1/1:0,5:5:15.05:200,15,0	0/0:16,0:12:33.10:0,33,527	0/0:13,0:11:6.80:0,7,439	0/0:26,0:26:78.27:0,78,1401	0/0:10,0:9:24.08:0,24,432	0/0:15,0:15:36.08:0,36,614	1/1:1,6:6:18.05:226,18,0	0/0:14,0:14:39.13:0,39,702	1/1:0,13:13:39.13:519,39,0	1/1:0,15:15:42.14:555,42,0	0/0:14,0:14:36.11:0,36,591	0/0:15,0:14:33.11:0,33,593	1/1:0,14:14:30.06:379,30,0	1/1:0,12:12:36.12:480,36,0	1/1:0,15:14:36.12:480,36,0	1/1:0,22:21:57.19:759,57,0	0/0:22,0:22:60.21:0,60,1080	1/1:2,14:14:42.14:560,42,0	1/1:1,6:7:18.06:240,18,0	1/1:0,9:9:27.09:356,27,0	0/0:14,0:14:42.14:0,42,755	0/0:16,0:16:45.15:0,45,788	0/0:18,0:18:48.16:0,48,865	1/1:0,17:17:45.15:600,45,0	1/1:0,15:13:39.13:520,39,0	1/1:0,13:12:30.10:400,30,0	1/1:2,3:4:9.03:119,9,0
chr10	60051972	.	T	TA	6000.43	PASS	AB=0.660;AC=49;AF=0.875;AN=56;BaseQRankSum=-1.562;DP=595;FS=5.627;HRun=12;HaplotypeScore=115.4296;InbreedingCoeff=0.4474;MQ=69.25;MQ0=0;MQRankSum=-3.740;QD=10.66;ReadPosRankSum=-0.696;VQSLOD=3.8677;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,24:29:44.74:405,45,0	0/1:1,9:10:0.88:154,0,1	0/0:13,0:14:12.98:0,13,92	0/0:17,0:14:10.26:0,10,55	1/1:7,23:30:53.99:506,54,0	1/1:6,21:26:48.08:467,48,0	1/1:2,10:14:16.35:222,16,0	1/1:9,25:37:59.94:662,60,0	1/1:9,12:21:18.03:175,18,0	1/1:15,0:19:31.77:164,32,0	1/1:15,0:23:41.52:197,42,0	1/1:3,13:17:8.45:227,8,0	0/1:12,16:28:7.76:256,0,8	1/1:8,0:17:25.36:125,25,0	1/1:24,0:35:25.82:120,26,0	1/1:18,0:26:9.20:110,9,0	1/1:4,15:19:14.15:299,14,0	0/1:7,2:9:31.79:46,0,32	1/1:16,0:23:26.02:151,26,0	1/1:14,0:24:34.33:164,34,0	1/1:4,0:6:2.84:14,3,0	1/1:6,19:25:26.07:397,26,0	1/1:5,16:21:36.53:351,37,0	1/1:5,9:14:5.12:207,5,0	1/1:10,0:17:27.87:134,28,0	1/1:13,2:20:31.84:192,32,0	1/1:20,1:30:40.49:197,40,0	1/1:12,0:19:11.40:58,11,0
chr10	60052162	.	TATA	T	10309.47	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=14.479;DP=585;FS=3.207;HRun=0;HaplotypeScore=88.8731;InbreedingCoeff=0.9963;MQ=94.83;MQ0=0;MQRankSum=-7.067;QD=44.44;ReadPosRankSum=5.190;VQSLOD=6.6372;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:96.33:0,96,2213	0/0:6,0:6:18.06:0,18,398	0/0:27,0:27:72.44:0,72,1510	0/0:30,0:30:81.26:0,81,1755	0/0:12,0:12:33.11:0,33,761	0/0:23,0:23:69.24:0,69,1590	0/0:13,0:13:36.12:0,36,788	0/0:35,0:35:96.31:0,96,2128	0/0:18,0:18:54.17:0,54,1198	1/1:0,13:13:39.13:662,39,0	1/1:1,11:12:27.09:460,27,0	0/0:26,0:26:78.27:0,78,1797	0/0:32,0:32:90.30:0,90,1992	1/1:0,19:19:51.17:870,51,0	1/1:0,26:26:72.25:1201,72,0	1/1:1,37:38:33.15:1618,33,0	0/0:28,0:28:84.27:0,84,1891	0/0:12,0:12:36.12:0,36,830	1/1:1,19:20:57.19:968,57,0	1/1:1,15:16:42.14:715,42,0	1/1:0,26:26:66.22:1109,66,0	0/0:19,0:19:57.15:0,57,1264	0/0:13,0:13:39.13:0,39,899	0/0:27,0:27:75.26:0,75,1730	1/1:1,13:14:30.10:511,30,0	1/1:0,19:19:57.20:971,57,0	1/1:0,22:22:57.20:970,57,0	1/1:0,7:7:15.05:256,15,0
chr10	60052602	.	GGAAAAA	G	1272.90	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=-3.051;DP=427;FS=3.201;HRun=0;HaplotypeScore=82.8207;InbreedingCoeff=0.0350;MQ=49.83;MQ0=20;MQRankSum=0.495;QD=6.81;ReadPosRankSum=0.598;VQSLOD=1.8614;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:21:12.04:0,12,300	1/1:0,5:4:5.93:84,6,0	0/0:27,0:7:16.87:0,17,261	0/0:11,0:3:3.48:0,3,68	0/0:25,0:25:59.43:0,59,895	0/0:18,0:18:51.16:0,51,1183	0/0:18,0:17:39.02:0,39,966	1/1:0,11:15:38.63:491,39,0	0/0:13,0:13:12.04:0,12,321	0/1:11,0:11:41.43:41,0,200	0/1:10,0:9:3.65:4,0,342	0/0:14,0:14:35.80:0,36,574	0/0:12,0:12:29.96:0,30,506	0/1:13,0:13:31.68:32,0,348	0/1:14,0:14:87.93:88,0,338	0/0:15,0:14:19.77:0,20,512	1/1:1,12:15:15.03:231,15,0	0/0:22,0:21:57.08:0,57,1094	0/1:10,0:11:40.03:40,0,180	0/1:15,0:15:54.31:54,0,423	0/1:12,0:11:69.40:69,0,139	0/0:11,0:11:30.09:0,30,740	0/0:13,0:12:21.35:0,21,206	0/0:19,0:19:30.07:0,30,621	0/1:13,0:13:96.30:96,0,305	0/1:15,0:15:32.73:33,0,452	0/1:13,0:13:99:116,0,212	0/1:21,0:14:63.87:64,0,202
chr10	60052954	.	A	AAC	5078.32	PASS	AB=1.000;AC=49;AF=0.907;AN=54;BaseQRankSum=-5.785;DP=361;FS=15.918;HRun=0;HaplotypeScore=65.0673;InbreedingCoeff=0.5497;MQ=80.12;MQ0=2;MQRankSum=-3.903;QD=16.33;ReadPosRankSum=-2.726;VQSLOD=2.9023;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:17:30.08:231,30,0	1/1:3,0:2:5.99:49,6,0	0/0:24,0:16:18.22:0,18,284	0/0:21,0:16:35.52:0,36,343	1/1:5,0:5:14.45:89,14,0	1/1:14,0:14:7.11:177,7,0	1/1:19,0:19:18.96:285,19,0	1/1:22,0:22:52.75:448,53,0	1/1:17,0:17:43.94:374,44,0	1/1:13,0:13:29.89:248,30,0	./.	1/1:13,0:13:18.21:240,18,0	1/1:17,0:17:42.78:337,43,0	1/1:10,0:10:23.72:180,24,0	1/1:16,0:16:41.80:334,42,0	1/1:2,11:13:3.01:36,3,0	0/1:16,0:16:8.58:185,0,9	1/1:4,0:4:8.99:73,9,0	1/1:13,0:13:35.91:304,36,0	1/1:15,0:15:20.04:184,20,0	1/1:9,0:9:23.95:194,24,0	1/1:9,0:9:2.73:86,3,0	1/1:10,0:10:26.14:171,26,0	1/1:12,0:12:1.47:113,1,0	1/1:8,0:8:20.95:168,21,0	1/1:15,0:15:24.84:171,25,0	1/1:15,0:15:35.94:302,36,0	1/1:6,0:6:14.50:97,15,0
chr10	60052956	.	C	CA	5225.97	PASS	AB=0.636;AC=51;AF=0.911;AN=56;BaseQRankSum=-5.875;DP=356;FS=14.985;HRun=2;HaplotypeScore=53.8681;InbreedingCoeff=0.7104;MQ=80.32;MQ0=2;MQRankSum=-1.754;QD=16.97;ReadPosRankSum=-3.704;VQSLOD=2.8318;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:15:32.97:248,33,0	1/1:3,0:2:5.99:49,6,0	0/0:26,0:16:27.69:0,28,266	0/0:22,0:17:35.58:0,36,346	1/1:5,0:5:14.45:89,14,0	1/1:14,0:14:13.98:190,14,0	1/1:19,0:19:30.49:303,30,0	1/1:21,1:22:53.54:454,54,0	1/1:17,0:17:46.46:380,46,0	1/1:13,0:13:29.90:248,30,0	0/1:3,4:6:0:0,0,0	1/1:13,0:13:23.88:245,24,0	1/1:17,0:17:43.71:340,44,0	1/1:9,0:9:23.75:180,24,0	1/1:16,0:16:42.34:335,42,0	1/1:11,0:11:2.80:36,3,0	1/1:16,0:16:4.87:213,5,0	1/1:5,0:5:8.99:73,9,0	1/1:14,0:14:35.11:303,35,0	1/1:14,0:14:24.09:196,24,0	1/1:9,0:9:23.95:194,24,0	1/1:7,0:7:10.22:98,10,0	1/1:9,0:9:26.37:177,26,0	1/1:12,0:12:7.48:119,7,0	1/1:8,0:8:20.95:168,21,0	1/1:2,11:13:26.73:182,27,0	1/1:14,0:14:35.94:302,36,0	1/1:6,0:6:14.81:102,15,0
chr10	60055270	.	C	CA	2445.48	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-11.023;DP=614;FS=2.364;HRun=1;HaplotypeScore=63.5035;InbreedingCoeff=0.9975;MQ=89.58;MQ0=0;MQRankSum=-2.288;QD=37.05;ReadPosRankSum=-1.687;VQSLOD=3.4669;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,102,1305	1/1:0,12:12:30.10:448,30,0	0/0:24,0:24:66.16:0,66,783	0/0:23,0:23:65.98:0,66,799	0/0:16,0:16:42.13:0,42,532	0/0:17,0:17:48.14:0,48,606	0/0:15,0:15:45.13:0,45,567	1/1:2,28:30:78.26:1164,78,0	0/0:22,0:22:63.20:0,63,814	0/0:17,0:17:45.14:0,45,572	0/0:9,0:9:27.09:0,27,347	0/0:30,0:30:87.27:0,87,1111	0/0:24,0:24:72.23:0,72,931	0/0:33,0:33:96.29:0,96,1227	0/0:42,0:42:99:0,123,1575	0/0:33,0:33:90.28:0,90,1146	1/1:2,22:24:66.22:976,66,0	0/0:14,0:14:42.14:0,42,543	0/0:10,0:10:27.08:0,27,339	0/0:16,0:16:48.16:0,48,615	0/0:28,0:28:75.23:0,75,960	0/0:22,0:22:63.20:0,63,815	0/0:17,0:17:51.16:0,51,650	0/0:22,0:22:66.21:0,66,850	0/0:12,0:12:33.11:0,33,422	0/0:27,0:27:69.22:0,69,879	0/0:32,0:31:93.30:0,93,1203	0/0:7,0:7:21.07:0,21,273
chr10	60056455	.	GCCGACAC	G	3233.06	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=0.242;DP=805;FS=5.501;HRun=0;HaplotypeScore=224.6099;InbreedingCoeff=0.9982;MQ=80.93;MQ0=0;MQRankSum=-8.802;QD=57.73;ReadPosRankSum=-2.686;VQSLOD=2.8341;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,132,5113	1/1:0,10:10:27.09:711,27,0	0/0:20,0:20:45.15:0,45,1622	0/0:23,0:24:49.58:0,50,2235	0/0:24,0:24:63.22:0,63,2500	0/0:21,0:21:63.22:0,63,2458	0/0:34,0:34:99:0,99,3714	1/1:6,29:35:84.27:2151,84,0	0/0:39,0:39:99:0,117,4669	0/0:33,0:33:99:0,99,3078	0/0:16,0:16:48.16:0,48,1543	0/0:34,0:34:99:0,102,4116	0/0:33,0:33:99:0,99,3939	0/0:30,0:30:90.31:0,90,2856	0/0:42,0:42:99:0,126,3892	0/0:48,0:48:99:0,144,4521	1/1:3,8:11:21.07:512,21,0	0/0:26,0:26:78.27:0,78,3111	0/0:29,0:29:87.30:0,87,2631	0/0:24,0:24:72.25:0,72,2302	0/0:51,0:51:99:0,154,4819	0/0:20,0:20:60.21:0,60,2374	0/0:14,0:14:39.13:0,39,1534	0/0:28,0:28:84.29:0,84,3193	0/0:22,0:22:63.22:0,63,2011	0/0:24,0:24:72.23:0,72,2104	0/0:42,0:42:99:0,123,4004	0/0:24,0:24:69.24:0,69,2265
chr10	60057241	.	CA	C	1026.70	PASS	AB=0.969;AC=22;AF=0.393;AN=56;BaseQRankSum=9.959;DP=402;FS=0.000;HRun=1;HaplotypeScore=56.3357;InbreedingCoeff=0.4746;MQ=73.39;MQ0=1;MQRankSum=-0.325;QD=3.99;ReadPosRankSum=6.588;VQSLOD=0.1786;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:44.89:0,45,442	0/0:4,0:4:11.62:0,12,122	0/1:14,1:12:9.66:10,0,229	0/0:8,0:7:11.27:0,11,148	0/0:7,0:7:21.04:0,21,235	0/0:11,0:11:11.03:0,11,227	0/0:17,0:17:39.42:0,39,418	0/0:13,0:13:25.19:0,25,250	0/1:8,0:8:6.81:7,0,110	1/1:13,1:14:5.75:99,6,0	1/1:7,0:7:3.19:24,3,0	0/0:11,0:11:21.90:0,22,251	0/0:13,0:13:17.33:0,17,257	1/1:23,0:23:16.48:154,16,0	1/1:27,2:29:9.04:160,9,0	1/1:24,0:24:17.67:123,18,0	0/0:20,0:20:33.39:0,33,517	0/0:5,0:5:8.77:0,9,87	1/1:13,0:13:2.02:84,2,0	0/1:10,0:10:18.62:29,0,19	0/1:55,0:55:35.74:185,0,36	0/0:3,0:3:5.66:0,6,35	0/0:7,0:7:12.93:0,13,171	0/0:10,0:10:26.92:0,27,258	0/1:14,0:14:49.66:62,0,50	0/1:12,2:13:1.33:74,0,1	1/1:17,0:17:32.33:115,32,0	1/1:14,0:14:29.12:89,29,0
chr10	60057242	.	AC	A	4756.88	PASS	AB=0.538;AC=23;AF=0.426;AN=54;BaseQRankSum=0.378;DP=393;FS=12.675;HRun=7;HaplotypeScore=44.0574;InbreedingCoeff=0.8782;MQ=72.61;MQ0=1;MQRankSum=0.384;QD=21.05;ReadPosRankSum=5.359;VQSLOD=3.1022;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:36.10:0,36,437	0/0:4,0:4:12.02:0,12,137	0/0:15,0:12:15.11:0,15,257	0/0:6,0:6:3.18:0,3,125	0/0:7,0:7:21.07:0,21,263	0/0:11,0:11:18.06:0,18,227	0/0:18,0:18:48.06:0,48,523	0/0:11,0:11:12:0,12,134	0/0:9,0:9:17.94:0,18,165	1/1:2,11:13:33.07:336,33,0	0/1:1,6:7:16.01:51,0,16	0/0:11,0:11:27.03:0,27,297	0/0:13,0:13:36.08:0,36,403	1/1:7,16:23:41.36:417,41,0	1/1:4,24:28:57.12:580,57,0	1/1:2,21:23:51.11:520,51,0	0/0:20,0:20:48.13:0,48,576	0/0:5,0:5:15.01:0,15,161	1/1:4,9:13:32.09:304,32,0	1/1:2,6:8:15.03:153,15,0	1/1:10,43:53:99:1120,111,0	./.	0/0:7,0:7:15.05:0,15,189	0/0:10,0:10:24.01:0,24,259	1/1:4,10:14:15.03:152,15,0	1/1:3,10:12:33.06:329,33,0	1/1:0,17:17:39.09:398,39,0	1/1:0,14:14:39.09:398,39,0
chr10	60057249	.	CA	C	799.09	PASS	AB=0.975;AC=14;AF=0.250;AN=56;BaseQRankSum=11.601;DP=408;FS=6.559;HRun=1;HaplotypeScore=55.6471;InbreedingCoeff=0.1899;MQ=77.22;MQ0=1;MQRankSum=-3.297;QD=3.47;ReadPosRankSum=7.666;VQSLOD=-0.1605;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:42.08:0,42,548	0/0:6,0:6:12.03:0,12,158	0/0:16,1:14:29.12:0,29,429	0/0:10,0:9:6.46:0,6,216	0/0:8,0:8:24.06:0,24,338	0/0:9,0:9:21.05:0,21,275	0/0:17,0:17:39.10:0,39,512	0/0:9,0:8:20.99:0,21,219	0/0:9,0:9:17.96:0,18,183	0/1:14,0:14:3.84:63,0,4	0/1:6,0:6:8.19:28,0,8	0/0:10,0:10:27.06:0,27,349	0/0:16,0:16:33.04:0,33,396	0/1:21,4:25:75.48:169,0,75	1/1:27,0:27:19.59:102,20,0	0/1:26,0:26:71.95:73,0,72	0/0:23,0:23:49.11:0,49,753	0/0:6,0:6:12.02:0,12,156	0/1:11,1:12:13.65:108,0,14	0/1:6,0:6:4:19,0,4	0/1:49,2:51:2.44:191,0,2	0/0:4,0:4:8.99:0,9,75	0/0:7,0:7:18.04:0,18,242	0/0:12,0:12:30.01:0,30,359	0/1:15,0:15:32.53:33,0,76	0/1:14,0:13:6.29:29,0,6	0/1:20,0:20:35.36:61,0,35	1/1:14,0:14:29.20:90,29,0
chr10	60059377	.	GA	G	4530.08	PASS	AB=0.798;AC=24;AF=0.429;AN=56;BaseQRankSum=4.840;DP=698;FS=1.009;HRun=12;HaplotypeScore=78.7891;InbreedingCoeff=0.8513;MQ=72.48;MQ0=0;MQRankSum=-0.861;QD=15.10;ReadPosRankSum=3.340;VQSLOD=5.7285;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:37:69.45:0,69,829	0/0:1,0:15:37.22:0,37,207	0/0:18,0:17:33.04:0,33,315	0/1:11,0:11:0.75:1,0,77	0/0:30,0:30:60.12:0,60,609	0/0:25,0:28:74.64:0,75,703	0/0:17,1:19:21.69:0,22,387	0/0:10,0:34:61.92:0,62,310	0/0:24,0:24:60.11:0,60,604	1/1:9,20:31:8.96:411,9,0	1/1:4,8:12:20.90:162,21,0	0/0:41,0:41:99:0,111,1088	0/0:20,0:20:45.08:0,45,451	1/1:5,25:30:16.88:496,17,0	1/1:10,21:33:33.38:422,33,0	1/1:1,28:29:80.67:627,81,0	0/0:2,0:24:48.46:0,48,259	0/0:29,1:33:71.81:0,72,698	0/1:8,16:25:29.52:338,0,30	1/1:4,20:24:56.75:441,57,0	1/1:3,7:10:23.90:186,24,0	0/0:26,0:26:63.11:0,63,628	0/0:27,1:30:42.55:0,43,574	0/0:17,0:19:53.77:0,54,511	1/1:7,18:25:26.41:388,26,0	1/1:7,26:33:52.49:555,52,0	1/1:6,22:29:3.90:386,4,0	1/1:1,7:8:14.94:116,15,0
chr10	60060023	.	TGGACTTCTGCTCGTCAACAGCTGAGAGAG	T	16473.92	PASS	AB=0.913;AC=48;AF=0.889;AN=54;BaseQRankSum=6.554;DP=572;FS=1.645;HRun=0;HaplotypeScore=436.0137;InbreedingCoeff=0.3570;MQ=78.62;MQ0=0;MQRankSum=-5.697;QD=34.54;ReadPosRankSum=8.765;VQSLOD=0.9156;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:24:9.03:472,9,0	1/1:5,2:7:1.25:219,1,0	0/0:43,0:43:34.73:0,35,879	0/0:35,0:35:48.15:0,48,2160	1/1:13,0:13:10.28:846,10,0	1/1:20,8:28:21.07:1558,21,0	1/1:26,0:26:2.99:24,3,0	1/1:21,0:21:5.99:71,6,0	1/1:14,0:14:15.05:1112,15,0	1/1:13,0:13:6.01:250,6,0	1/1:19,0:19:15.05:1054,15,0	1/1:15,10:25:18.06:1335,18,0	1/1:13,3:16:3.01:223,3,0	1/1:17,0:17:21.07:1406,21,0	1/1:33,0:33:15.03:783,15,0	1/1:29,0:29:24.08:1605,24,0	1/1:21,2:23:6.02:445,6,0	1/1:17,0:17:6.02:389,6,0	./.	1/1:10,0:10:6.02:445,6,0	0/1:28,0:28:2.04:17,0,2	1/1:10,3:13:3.01:223,3,0	1/1:9,2:11:6.02:405,6,0	0/1:26,7:33:3.30:433,0,3	1/1:14,0:14:12.04:890,12,0	1/1:19,0:19:3.01:222,3,0	1/1:18,0:18:18.06:1159,18,0	1/1:6,0:6:12.04:890,12,0
chr10	60060037	.	TCAACAGCTGAGAGAGGGACTTCTGCTCG	T	13347.97	PASS	AB=0.880;AC=23;AF=0.411;AN=56;BaseQRankSum=13.764;DP=475;FS=7.491;HRun=0;HaplotypeScore=366.7325;InbreedingCoeff=-0.5557;MQ=80.47;MQ0=0;MQRankSum=-6.257;QD=39.61;ReadPosRankSum=10.308;VQSLOD=1.1168;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:19,2:21:99:352,0,300	0/1:6,0:6:89.35:170,0,89	0/0:37,0:38:58.28:0,58,3860	0/0:38,0:38:99:0,100,4865	0/1:8,4:12:99:727,0,109	0/1:25,0:25:99:1214,0,575	0/0:21,0:21:63.06:0,63,754	0/0:11,0:11:22.83:0,23,358	0/1:5,5:10:68.53:970,0,69	0/1:11,1:12:99:183,0,124	0/1:13,5:18:99:893,0,142	0/1:24,0:24:99:1042,0,466	0/1:13,0:13:99:154,0,316	0/1:9,6:15:99:1205,0,109	0/1:21,3:24:99:610,0,295	0/1:20,7:27:99:1347,0,299	0/1:16,0:16:99:319,0,487	0/1:10,2:12:99:309,0,157	0/0:7,0:7:20.14:0,20,112	0/1:5,2:7:68.92:380,0,69	0/0:21,0:21:42.21:0,42,344	0/1:12,0:12:99:151,0,345	0/1:9,0:9:99:300,0,227	0/1:27,0:27:99:323,0,388	0/1:6,4:10:99:773,0,100	0/1:16,1:17:99:152,0,246	0/1:11,5:16:99:979,0,147	1/1:0,4:4:12.04:794,12,0
chr10	60060293	.	TAAA	T	4422.12	PASS	AB=0.577;AC=27;AF=0.482;AN=56;BaseQRankSum=0.004;DP=627;FS=0.810;HRun=16;HaplotypeScore=108.9539;InbreedingCoeff=0.7563;MQ=69.04;MQ0=7;MQRankSum=-2.994;QD=14.84;ReadPosRankSum=3.860;VQSLOD=3.4841;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:35:61.15:0,61,616	0/1:3,1:12:18.35:18,0,27	0/0:46,1:20:25.01:0,25,291	0/0:30,0:18:27.56:0,28,372	0/0:12,0:24:50.45:0,50,547	0/0:23,0:28:73.71:0,74,1092	0/0:15,0:15:36.12:0,36,589	0/1:7,2:29:28.53:29,0,82	0/0:6,0:21:38.86:0,39,315	1/1:3,11:17:31.34:338,31,0	1/1:7,11:20:35.70:352,36,0	0/0:24,0:26:63.14:0,63,1002	0/0:19,0:20:45.99:0,46,677	1/1:4,18:22:45.02:484,45,0	1/1:8,21:30:56.88:598,57,0	1/1:7,17:26:43.39:467,43,0	0/1:7,1:23:14.12:28,0,14	0/0:9,0:20:47.41:0,47,431	1/1:8,9:20:37.44:337,37,0	1/1:6,14:20:41.87:442,42,0	1/1:5,5:10:2.88:32,3,0	0/0:17,0:21:54.16:0,54,875	0/0:20,0:23:54.13:0,54,823	0/0:19,0:19:45.11:0,45,720	1/1:2,13:16:29.94:294,30,0	1/1:5,20:28:52.14:568,52,0	1/1:7,14:21:32.67:339,33,0	1/1:0,4:4:9.02:97,9,0
chr10	60061781	.	A	AAAG	4986.14	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=-5.883;DP=350;FS=3.509;HRun=0;HaplotypeScore=27.2770;InbreedingCoeff=0.8059;MQ=45.76;MQ0=118;MQRankSum=-3.515;QD=23.74;ReadPosRankSum=1.403;VQSLOD=3.7514;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,18:19:27.02:504,27,0	0/0:5,0:3:5.98:0,6,64	0/0:9,0:2:5.89:0,6,37	0/0:11,0:4:5.92:0,6,39	1/1:6,2:6:3.01:53,3,0	0/0:18,0:12:12:0,12,154	0/0:10,0:7:5.98:0,6,64	0/0:20,0:8:18.06:0,18,260	1/1:1,12:7:18.06:355,18,0	1/1:4,10:9:17.99:327,18,0	1/1:3,3:2:3.01:62,3,0	0/0:20,0:10:24:0,24,305	0/0:9,0:5:12.04:0,12,178	1/1:4,9:9:15.05:309,15,0	1/1:4,12:8:12.04:247,12,0	1/1:2,13:10:12.04:240,12,0	0/0:13,0:10:15.03:0,15,203	1/1:0,6:6:15.05:309,15,0	1/1:7,7:7:15.05:310,15,0	1/1:2,8:8:18.06:370,18,0	1/1:1,10:11:24.08:494,24,0	0/0:12,0:7:9.03:0,9,134	0/0:4,0:3:9.03:0,9,134	0/0:9,0:9:2.97:0,3,20	1/1:3,6:5:9.03:177,9,0	1/1:0,14:11:30.10:619,30,0	1/1:9,13:15:12.04:239,12,0	1/1:0,11:6:18.06:371,18,0
chr10	60061888	.	ACTGAACT	A	485.87	PASS	AB=0.988;AC=9;AF=0.214;AN=42;BaseQRankSum=2.861;DP=359;FS=7.324;HRun=0;HaplotypeScore=36.8497;InbreedingCoeff=0.3277;MQ=40.51;MQ0=224;MQRankSum=-2.171;QD=8.38;ReadPosRankSum=-0.791;VQSLOD=0.0145;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:2,4:4:12.04:287,12,0	0/0:5,0:3:3.01:0,3,119	0/0:13,0:2:2.75:0,3,33	0/1:14,0:5:16.25:16,0,78	./.	./.	0/0:15,0:9:15.05:0,15,518	0/0:20,0:2:6.02:0,6,238	1/1:0,3:3:6.02:154,6,0	0/0:15,0:6:18.06:0,18,654	0/0:7,0:4:3.01:0,3,118	0/0:19,0:9:2.76:0,3,52	0/0:13,0:5:6.02:0,6,237	0/0:10,0:2:3.01:0,3,118	./.	0/1:25,1:13:70.82:71,0,113	./.	1/1:1,1:1:3.01:77,3,0	0/0:17,0:7:18.06:0,18,714	0/0:18,0:9:15.05:0,15,403	./.	./.	0/1:7,0:1:0:0,0,0	./.	0/0:13,0:5:12.04:0,12,329	0/0:14,0:7:15.05:0,15,593	0/0:14,0:9:6.02:0,6,233	0/0:11,0:5:0:0,0,0
chr10	60065149	.	TGAAC	T	255.89	PASS	AC=6;AF=0.333;AN=18;BaseQRankSum=1.604;DP=334;FS=0.000;HRun=0;HaplotypeScore=11.1808;MQ=27.23;MQ0=246;MQRankSum=0.261;QD=7.31;ReadPosRankSum=-0.560;VQSLOD=1.0146;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	1/1:0,8:4:6.02:116,6,0	0/0:12,0:1:3.01:0,3,49	0/0:4,0:2:0.93:0,1,8	./.	./.	./.	./.	./.	0/0:24,0:7:18.06:0,18,448	./.	./.	./.	./.	./.	./.	./.	./.	./.	0/0:9,0:3:6.02:0,6,163	./.	1/1:1,16:7:9.03:174,9,0	1/1:0,10:4:3.01:58,3,0	./.	./.	0/0:15,0:3:9.03:0,9,209	./.	0/0:13,0:5:3.01:0,3,82
chr10	60067240	.	AAGGGAGGGAGGG	A	3864.91	PASS	AB=0.963;AC=9;AF=0.161;AN=56;BaseQRankSum=9.351;DP=501;FS=8.824;HRun=0;HaplotypeScore=167.0960;InbreedingCoeff=0.8373;MQ=74.69;MQ0=0;MQRankSum=-9.183;QD=39.44;ReadPosRankSum=1.520;VQSLOD=2.6870;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:9,12:21:15.05:440,15,0	0/0:9,0:9:21.04:0,21,1048	0/0:26,0:20:33.11:0,33,1053	0/0:22,0:19:26.76:0,27,1038	1/1:3,13:16:36.04:1045,36,0	0/0:19,0:19:54.18:0,54,2756	0/0:32,0:32:87.30:0,87,4558	0/0:14,0:14:30.10:0,30,1573	1/1:1,20:21:42.14:1465,42,0	0/0:21,0:21:54.18:0,54,2651	0/0:8,0:8:12.04:0,12,545	0/0:19,0:19:51.16:0,51,2709	0/0:17,0:17:39.13:0,39,2247	0/0:21,0:21:54.19:0,54,3006	0/0:27,0:27:72.25:0,72,4204	0/1:25,1:26:48.19:48,0,3312	0/0:5,0:5:9.03:0,9,494	1/1:3,11:14:24.08:867,24,0	0/0:8,0:8:18.06:0,18,962	0/0:16,0:16:45.15:0,45,2544	0/0:19,0:19:42.14:0,42,2491	0/0:17,0:17:48.16:0,48,2656	0/0:14,0:14:36.12:0,36,1873	0/0:23,0:23:57.20:0,57,3333	0/0:7,0:7:18.05:0,18,922	0/0:26,0:26:60.21:0,60,3312	0/0:23,0:23:63.22:0,63,3369	0/0:9,0:9:27.09:0,27,1425
chr10	60067555	.	TTGTGTGTG	T	570.99	PASS	AB=0.692;AC=9;AF=0.196;AN=46;BaseQRankSum=3.228;DP=606;FS=0.000;HRun=0;HaplotypeScore=161.1376;InbreedingCoeff=0.5577;MQ=58.01;MQ0=6;MQRankSum=-3.495;QD=4.84;ReadPosRankSum=1.730;VQSLOD=2.6053;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:36:12.17:0,12,316	0/0:10,0:14:9.01:0,9,247	./.	./.	0/0:8,0:8:0.47:0,0,1	1/1:15,2:18:6.02:131,6,0	1/1:23,8:31:17.98:328,18,0	0/0:30,0:29:18.09:0,18,280	0/0:32,0:32:4.85:0,5,83	0/0:22,0:21:25.33:0,25,714	./.	0/1:10,0:18:16.87:17,0,59	1/1:13,6:21:11.73:221,12,0	0/0:29,0:29:14.33:0,14,446	0/0:35,0:35:14.98:0,15,393	0/0:21,0:21:9.03:0,9,189	0/0:20,0:29:24.55:0,25,747	0/0:17,0:16:28.65:0,29,783	0/0:13,0:11:5.05:0,5,66	0/0:9,0:8:6.02:0,6,112	0/0:34,0:33:0.47:0,0,1	./.	./.	1/1:26,3:30:0.94:1,1,0	0/0:22,0:20:12.04:0,12,379	0/0:19,0:19:23.28:0,23,581	0/0:19,0:19:9.92:0,10,273	0/0:7,0:7:3.01:0,3,75
chr10	60068343	.	TTC	T	4771.07	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=14.021;DP=640;FS=2.781;HRun=0;HaplotypeScore=74.8310;InbreedingCoeff=0.8932;MQ=65.59;MQ0=0;MQRankSum=1.542;QD=33.13;ReadPosRankSum=1.926;VQSLOD=6.7399;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,114,1994	0/0:10,0:10:27.08:0,27,461	0/0:5,0:5:3.33:0,3,139	0/1:5,0:6:7.90:8,0,33	0/0:26,0:26:69.18:0,69,1188	1/1:0,20:20:45.15:641,45,0	1/1:2,22:24:51.16:703,51,0	0/0:45,0:45:99:0,129,2262	0/0:15,0:15:42.12:0,42,698	0/0:32,0:32:84.26:0,84,1456	0/0:28,0:28:81.26:0,81,1432	1/1:1,23:24:60.20:855,60,0	1/1:1,16:17:45.15:641,45,0	0/0:28,0:28:81.25:0,81,1409	0/0:36,0:36:87.30:0,87,1541	0/0:30,0:30:81.28:0,81,1465	0/0:30,0:29:87.25:0,87,1469	0/0:20,0:20:60.16:0,60,1028	0/0:31,0:31:81.21:0,81,1336	0/0:24,0:24:72.23:0,72,1255	0/0:21,0:21:57.19:0,57,988	1/1:1,25:26:66.22:941,66,0	1/1:0,13:13:36.12:512,36,0	1/1:1,13:14:33.11:470,33,0	0/0:19,0:19:51.15:0,51,868	0/0:31,0:31:90.30:0,90,1562	0/0:18,0:18:54.17:0,54,950	0/0:9,0:9:27.09:0,27,490
chr10	60068496	.	AGGGAAAGGCCTATGGTTCTCTGCCCCAGT	A	13808.47	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=13.502;DP=571;FS=5.007;HRun=0;HaplotypeScore=388.9517;InbreedingCoeff=0.9498;MQ=72.43;MQ0=0;MQRankSum=-10.427;QD=76.71;ReadPosRankSum=4.130;VQSLOD=2.9446;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,123,12950	0/0:13,0:13:27.08:0,27,2742	0/0:21,0:21:36:0,36,1660	0/0:11,0:10:13.29:0,13,505	0/0:14,0:14:36.12:0,36,4108	0/0:17,0:17:42.14:0,42,3454	0/0:34,0:34:87.30:0,87,9297	0/0:40,0:40:99:0,108,7784	0/0:22,0:22:63.22:0,63,7399	1/1:3,18:21:45.15:2728,45,0	1/1:4,11:15:12.04:558,12,0	0/0:34,0:34:96.33:0,96,11459	0/0:22,0:22:60.21:0,60,6802	1/1:3,13:16:21.07:1594,21,0	1/1:4,20:24:30.10:2045,30,0	1/1:3,15:18:12.04:911,12,0	0/0:40,0:40:99:0,108,12058	0/0:25,0:25:66.23:0,66,6916	1/1:11,12:23:33.08:1286,33,0	1/1:3,10:13:18.06:820,18,0	1/1:7,10:17:6.02:305,6,0	0/0:13,0:13:39.13:0,39,4397	0/0:13,0:13:33.11:0,33,3133	0/0:28,0:28:75.26:0,75,7497	1/1:0,9:9:15.05:1060,15,0	1/1:2,10:12:24.05:1136,24,0	1/1:0,5:5:12.04:911,12,0	1/1:4,3:7:6.02:455,6,0
chr10	60070590	.	TGC	T	15869.82	PASS	AB=1.000;AC=25;AF=0.446;AN=56;BaseQRankSum=0.408;DP=799;FS=2.564;HRun=0;HaplotypeScore=145.8769;InbreedingCoeff=0.9248;MQ=89.25;MQ0=1;MQRankSum=-5.177;QD=43.24;ReadPosRankSum=4.470;VQSLOD=5.9827;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:48.33:0,48,1093	0/1:12,0:12:12.89:13,0,266	0/0:29,0:29:84.46:0,84,1462	0/0:30,0:30:81.17:0,81,1433	0/0:19,0:19:25.04:0,25,461	0/0:27,0:27:81.26:0,81,1589	0/0:32,0:32:89.95:0,90,1791	0/0:34,0:34:20.18:0,20,747	0/0:25,0:25:51.18:0,51,716	1/1:0,22:22:66.23:1075,66,0	1/1:0,10:9:18.06:293,18,0	0/0:45,0:45:99:0,132,2576	0/0:32,0:32:93.25:0,93,1728	1/1:0,38:38:92.89:1514,93,0	1/1:0,42:42:99:1955,120,0	1/1:0,58:58:99:2641,163,0	0/0:33,0:33:76.24:0,76,965	0/0:24,0:24:49.17:0,49,679	1/1:0,19:19:57.14:876,57,0	1/1:0,15:15:36.12:587,36,0	1/1:0,58:58:99:2689,166,0	0/0:15,0:15:45.14:0,45,865	0/0:10,0:10:30.10:0,30,609	0/0:37,0:37:99:0,111,2167	1/1:0,23:23:60.20:978,60,0	1/1:0,26:26:78.24:1243,78,0	1/1:0,40:40:99:1808,111,0	1/1:0,4:4:12.04:196,12,0
chr10	60071406	.	GT	G	327.26	PASS	AB=0.816;AC=12;AF=0.214;AN=56;BaseQRankSum=0.569;DP=535;FS=3.373;HRun=17;HaplotypeScore=85.7958;InbreedingCoeff=-0.0944;MQ=70.51;MQ0=3;MQRankSum=1.367;QD=1.52;ReadPosRankSum=5.217;VQSLOD=-0.7419;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:34:67.99:0,68,347	0/1:10,1:11:0.19:0,0,67	0/0:19,0:8:4.60:0,5,36	0/0:20,0:15:14.28:0,14,69	0/0:9,0:19:33.73:0,34,193	0/1:9,4:14:32.65:50,0,33	0/1:19,5:25:6.17:81,0,6	0/0:27,0:27:35.31:0,35,227	0/0:12,0:12:22.26:0,22,133	0/0:14,0:14:5.05:0,5,65	0/0:13,0:13:16.72:0,17,113	0/1:15,5:22:7.69:67,0,8	0/1:24,1:27:0.57:87,0,1	0/0:14,2:16:7.84:0,8,120	0/0:16,1:18:20.76:0,21,123	0/1:17,1:20:14.59:15,0,149	0/0:15,0:23:20.15:0,20,233	0/0:11,0:26:16.06:0,16,100	0/1:19,2:22:19.29:19,0,79	0/0:9,0:13:13.61:0,14,81	0/0:16,2:17:1.52:0,2,70	0/1:10,8:19:32.16:35,0,32	0/1:4,6:11:23.97:24,0,30	0/1:16,6:24:3.36:70,0,3	0/1:11,2:13:15.58:16,0,74	0/0:19,0:20:13.97:0,14,154	0/0:23,0:24:21.75:0,22,222	0/1:7,0:7:1.99:2,0,34
chr10	60071678	.	CCTGT	C	4804.83	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=12.930;DP=763;FS=22.708;HRun=0;HaplotypeScore=122.6891;InbreedingCoeff=0.9996;MQ=82.33;MQ0=0;MQRankSum=-0.645;QD=47.11;ReadPosRankSum=3.704;VQSLOD=3.9019;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,37:40:93.32:1802,93,0	0/0:15,0:15:42.14:0,42,1149	0/0:26,0:26:75.22:0,75,1880	0/0:21,0:21:51.18:0,51,1350	1/1:1,20:20:51.11:910,51,0	0/0:20,0:20:57.20:0,57,1549	0/0:21,0:21:63.20:0,63,1636	0/0:29,0:29:84.29:0,84,2289	1/1:1,29:30:81.28:1570,81,0	0/0:38,0:36:99:0,105,2859	0/0:20,0:20:51.18:0,51,1372	0/0:30,0:30:84.29:0,84,2273	0/0:34,0:34:99:0,99,2662	0/0:25,0:25:69.24:0,69,1856	0/0:37,0:37:99:0,108,2945	0/0:45,1:46:80.31:0,80,3602	0/0:32,0:32:93.32:0,93,2516	1/1:0,11:11:27.09:523,27,0	0/0:26,0:26:78.27:0,78,2108	0/0:31,0:31:93.32:0,93,2496	0/0:23,0:23:66.23:0,66,1808	0/0:21,0:21:54.19:0,54,1474	0/0:29,0:29:77.89:0,78,2099	0/0:24,0:24:72.25:0,72,1959	0/0:28,0:28:81.28:0,81,2217	0/0:37,0:37:99:0,108,2950	0/0:36,0:36:99:0,105,2823	0/0:12,0:12:33.11:0,33,905
chr10	60071841	.	A	AGAG	6527.30	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-7.831;DP=696;FS=1.274;HRun=0;HaplotypeScore=142.4720;InbreedingCoeff=0.9974;MQ=59.08;MQ0=10;MQRankSum=1.051;QD=37.95;ReadPosRankSum=2.151;VQSLOD=5.9959;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:38:90.30:0,90,1317	0/0:8,0:8:18.06:0,18,263	0/0:37,0:24:41.16:0,41,557	0/0:26,0:17:30.73:0,31,479	0/0:16,0:16:33.11:0,33,483	1/1:3,14:17:39.13:780,39,0	1/1:5,13:19:33.08:640,33,0	0/0:21,0:18:42.14:0,42,615	0/0:18,0:18:39.11:0,39,551	0/0:16,0:16:36.12:0,36,506	0/0:18,0:18:36.12:0,36,527	1/1:15,21:34:78.09:1399,78,0	1/1:14,11:25:39.48:657,39,0	0/0:24,0:24:54.10:0,54,742	0/0:35,0:35:75.25:0,75,1098	0/0:45,0:43:99:0,105,1530	0/0:39,0:39:72.24:0,72,1054	0/0:20,0:20:48.16:0,48,703	0/0:22,0:21:45.15:0,45,652	0/0:10,0:9:21.07:0,21,307	0/0:31,0:31:66.21:0,66,947	1/1:10,12:23:39.13:802,39,0	1/1:7,12:19:48.16:949,48,0	1/1:11,22:33:63.22:1301,63,0	0/0:22,0:22:57.19:0,57,828	0/0:24,0:24:60.20:0,60,879	0/0:34,0:31:66.22:0,66,958	0/0:18,0:17:30.02:0,30,374
chr10	60071925	.	C	CT	19824.19	PASS	AC=52;AF=0.963;AN=54;BaseQRankSum=1.300;DP=738;FS=1.595;HRun=3;HaplotypeScore=187.9702;InbreedingCoeff=0.9629;MQ=41.09;MQ0=25;MQRankSum=1.073;QD=28.65;ReadPosRankSum=1.908;VQSLOD=3.8941;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,40:39:84.28:1170,84,0	1/1:1,15:15:33.11:454,33,0	./.	0/0:25,0:8:15.03:0,15,160	1/1:3,18:18:30.10:420,30,0	1/1:2,24:25:54.18:755,54,0	1/1:5,16:17:39.13:537,39,0	1/1:8,21:17:39.05:502,39,0	1/1:1,18:18:42.14:587,42,0	1/1:4,27:28:72.24:1007,72,0	1/1:3,24:25:57.19:796,57,0	1/1:3,39:41:93.31:1300,93,0	1/1:1,35:36:93.30:1273,93,0	1/1:2,27:29:66.22:904,66,0	1/1:0,35:34:87.22:1180,87,0	1/1:5,25:29:75.21:1027,75,0	1/1:3,41:40:90.26:1237,90,0	1/1:6,21:23:21.32:657,21,0	1/1:7,15:18:42.14:583,42,0	1/1:2,25:26:57.19:797,57,0	1/1:3,20:16:30.10:420,30,0	1/1:0,30:30:63.06:858,63,0	1/1:3,22:23:48.15:656,48,0	1/1:0,17:16:36.12:503,36,0	1/1:3,14:17:36.08:481,36,0	1/1:3,28:30:78.24:1073,78,0	1/1:3,14:17:33.07:439,33,0	1/1:0,8:7:15.05:210,15,0
chr10	60073866	.	GGTGTGTGTGT	G	3110.24	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=5.488;DP=776;FS=0.000;HRun=0;HaplotypeScore=241.2555;InbreedingCoeff=0.9178;MQ=52.08;MQ0=7;MQRankSum=-7.008;QD=42.61;ReadPosRankSum=4.603;VQSLOD=3.1112;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,18:28:39.13:1096,39,0	0/0:5,0:7:9:0,9,292	0/0:34,0:19:39.12:0,39,1361	0/0:30,0:22:48.12:0,48,1907	1/1:5,11:17:27.05:688,27,0	0/0:27,0:30:22.30:0,22,750	0/0:45,0:42:24.05:0,24,896	0/0:33,0:31:57.18:0,57,2034	1/1:6,16:22:42.14:1294,42,0	0/0:23,0:24:60.19:0,60,2181	0/0:18,0:18:14.79:0,15,545	0/0:42,0:44:24.16:0,24,604	0/0:23,0:23:18.45:0,18,499	0/0:18,0:27:17.98:0,18,597	0/0:37,0:46:33.10:0,33,1062	0/0:24,0:30:23.74:0,24,804	0/0:18,0:21:24.06:0,24,923	1/1:3,3:6:6.02:185,6,0	0/0:34,0:38:61.38:0,61,2205	0/0:22,0:26:17.76:0,18,639	0/0:30,0:29:21.50:0,21,799	0/0:34,0:32:15.05:0,15,508	0/0:19,0:20:12.02:0,12,311	0/0:29,0:32:13.58:0,14,689	0/0:18,0:24:18.06:0,18,788	0/0:30,0:28:60.03:0,60,2210	0/0:21,0:26:30.04:0,30,1171	0/0:18,0:18:24.04:0,24,955
chr10	60074100	.	T	TG	2911.86	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-9.979;DP=637;FS=11.799;HRun=5;HaplotypeScore=72.1562;InbreedingCoeff=0.9978;MQ=77.55;MQ0=0;MQRankSum=-1.447;QD=28.83;ReadPosRankSum=1.268;VQSLOD=3.3798;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,40:46:90.30:1230,90,0	0/0:14,0:14:33.09:0,33,374	0/0:18,0:18:44.79:0,45,455	0/0:19,0:18:20.88:0,21,292	1/1:1,17:18:48.16:655,48,0	0/0:18,0:18:45.11:0,45,501	0/0:14,0:14:39.11:0,39,442	0/0:23,0:23:60.17:0,60,680	1/1:2,18:20:23.17:704,23,0	0/0:26,0:26:72.21:0,72,815	0/0:17,0:17:48.13:0,48,541	0/0:23,0:23:57.16:0,57,646	0/0:27,0:27:78.22:0,78,884	0/0:19,0:19:57.16:0,57,646	0/0:34,0:34:99:0,99,1111	0/0:30,0:30:90.26:0,90,1020	0/0:34,0:34:99:0,99,1120	1/1:3,14:17:36.12:483,36,0	0/0:20,0:20:54.15:0,54,611	0/0:29,0:29:87.17:0,87,949	0/0:23,0:23:57.16:0,57,646	0/0:24,0:24:60.17:0,60,673	0/0:14,0:14:42.12:0,42,476	0/0:29,0:29:78.16:0,78,860	0/0:12,0:12:36.08:0,36,393	0/0:26,0:25:69.20:0,69,781	0/0:33,0:32:90.26:0,90,1018	0/0:10,0:10:30.09:0,30,340
chr10	60075619	.	GTC	G	7402.58	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=15.156;DP=702;FS=0.684;HRun=0;HaplotypeScore=100.3397;InbreedingCoeff=0.9976;MQ=82.77;MQ0=1;MQRankSum=-4.400;QD=30.46;ReadPosRankSum=0.538;VQSLOD=6.6842;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,120,2193	1/1:12,0:12:19.89:98,20,0	0/0:18,0:18:48.16:0,48,854	0/0:26,0:26:69.23:0,69,1208	0/0:13,0:13:33.11:0,33,605	1/1:1,19:20:57.19:817,57,0	1/1:0,38:38:99:1633,114,0	1/1:36,0:36:75.06:363,75,0	0/0:33,0:33:90.31:0,90,1643	0/0:29,0:29:81.27:0,81,1454	0/0:11,0:11:33.11:0,33,599	1/1:1,45:46:99:1805,126,0	1/1:0,24:24:69.23:978,69,0	0/0:39,0:39:99:0,111,2032	0/0:36,0:36:99:0,99,1783	0/0:37,0:37:99:0,105,1917	1/1:17,0:16:24.76:118,25,0	0/0:27,0:27:81.26:0,81,1453	0/0:18,0:18:48.16:0,48,879	0/0:11,0:11:33.11:0,33,598	0/0:41,0:41:99:0,117,2053	1/1:0,14:14:35.95:516,36,0	1/1:1,8:9:21.07:301,21,0	1/1:0,27:27:54.18:774,54,0	0/0:19,0:18:51.17:0,51,935	0/0:19,0:19:57.20:0,57,1045	0/0:30,0:30:87.28:0,87,1562	0/0:10,0:10:21.07:0,21,380
chr10	60075621	.	CTCTGTTA	C	3569.99	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=4.033;DP=696;FS=1.290;HRun=0;HaplotypeScore=185.2671;InbreedingCoeff=0.9951;MQ=81.92;MQ0=1;MQRankSum=-8.904;QD=57.58;ReadPosRankSum=-1.945;VQSLOD=3.4187;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,123,4901	1/1:4,7:11:21.07:565,21,0	0/0:16,0:16:48.16:0,48,1837	0/0:26,0:26:75.25:0,75,2583	0/0:13,0:13:36.12:0,36,1448	0/0:20,0:20:57.20:0,57,1024	0/0:38,0:38:99:0,114,2001	1/1:5,30:35:90.29:2288,90,0	0/0:31,0:31:90.31:0,90,3546	0/0:29,0:29:81.27:0,81,3222	0/0:11,0:11:33.11:0,33,1250	0/0:46,0:46:99:0,126,2258	0/0:25,0:25:72.25:0,72,1323	0/0:41,0:41:99:0,117,4726	0/0:34,0:34:99:0,99,3882	0/0:35,0:35:99:0,105,4146	1/1:4,12:15:27.09:718,27,0	0/0:27,0:27:81.26:0,81,3137	0/0:17,0:17:51.18:0,51,1939	0/0:12,0:12:36.12:0,36,1437	0/0:42,0:42:99:0,123,4490	0/0:14,0:14:36.12:0,36,648	0/0:8,0:8:21.07:0,21,377	0/0:27,0:27:57.19:0,57,1011	0/0:19,0:18:54.19:0,54,2204	0/0:19,0:19:57.20:0,57,2309	0/0:32,0:32:93.30:0,93,3576	0/0:10,0:10:21.07:0,21,727
chr10	60076483	.	G	GT	4512.81	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-13.544;DP=722;FS=2.213;HRun=3;HaplotypeScore=81.4006;InbreedingCoeff=0.9988;MQ=83.73;MQ0=0;MQRankSum=-1.761;QD=38.57;ReadPosRankSum=2.335;VQSLOD=5.0927;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,47:49:99:1848,132,0	0/0:7,0:7:21.06:0,21,252	0/0:19,0:19:52.40:0,52,602	0/0:23,0:23:57.13:0,57,654	1/1:0,17:18:51.13:691,51,0	0/0:27,0:27:78.19:0,78,899	0/0:20,0:20:60.15:0,60,686	0/0:34,0:34:93.24:0,93,1071	1/1:1,23:24:69.23:966,69,0	0/0:25,0:25:75.22:0,75,889	0/0:17,0:17:51.16:0,51,612	0/0:44,0:44:99:0,120,1426	0/0:23,0:23:66.20:0,66,790	0/0:36,0:36:99:0,105,1245	0/0:35,0:35:96.28:0,96,1140	0/0:26,0:26:75.23:0,75,894	0/0:26,0:26:69.18:0,69,804	1/1:0,26:26:72.24:1008,72,0	0/0:18,0:18:42.12:0,42,494	0/0:16,0:16:45.13:0,45,530	0/0:39,0:39:99:0,108,1285	0/0:19,0:19:57.17:0,57,684	0/0:23,0:23:63.18:0,63,744	0/0:33,0:33:93.20:0,93,1083	0/0:17,0:17:48.15:0,48,576	0/0:25,0:25:72.21:0,72,854	0/0:29,0:29:78.24:0,78,935	0/0:24,0:24:72.22:0,72,864
chr10	60076904	.	C	CTATA	13618.42	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=14.225;DP=803;FS=2.701;HRun=0;HaplotypeScore=147.7793;InbreedingCoeff=0.9941;MQ=64.76;MQ0=1;MQRankSum=-6.195;QD=48.12;ReadPosRankSum=1.098;VQSLOD=5.3668;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:22:52.73:0,53,947	1/1:0,10:10:27.09:720,27,0	0/0:42,0:38:93.31:0,93,1660	0/0:30,0:26:60.21:0,60,1092	0/0:30,0:30:78.25:0,78,1415	1/1:4,33:38:56.77:1520,57,0	1/1:6,16:23:11.11:289,11,0	1/1:12,30:49:99:3022,132,0	0/0:22,0:22:63.20:0,63,1127	0/0:36,0:36:99:0,99,1773	0/0:24,0:24:69.24:0,69,1276	1/1:3,27:31:57.20:1518,57,0	1/1:1,20:21:51.18:1360,51,0	0/0:32,0:32:93.32:0,93,1708	0/0:39,0:39:99:0,111,2054	0/0:44,0:44:99:0,123,2265	1/1:3,24:27:54.19:1432,54,0	0/0:11,0:11:33.11:0,33,616	0/0:22,0:22:60.20:0,60,1064	0/0:22,0:22:60.19:0,60,1078	0/0:30,0:30:78.25:0,78,1398	1/1:0,16:16:30.10:800,30,0	1/1:9,29:41:68.41:1838,68,0	1/1:1,25:27:41.65:1120,42,0	0/0:35,0:35:93.30:0,93,1696	0/0:31,0:31:90.30:0,90,1626	0/0:33,0:33:96.32:0,96,1746	0/0:14,0:14:42.14:0,42,783
chr10	60077469	.	CTCTGTCTG	C	7609.01	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-5.726;DP=790;FS=3.769;HRun=0;HaplotypeScore=231.9210;InbreedingCoeff=0.9834;MQ=67.66;MQ0=6;MQRankSum=-11.107;QD=31.18;ReadPosRankSum=-0.174;VQSLOD=4.5476;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:42:15.05:0,15,390	1/1:2,10:12:24.08:611,24,0	0/0:35,0:25:18.05:0,18,598	0/0:35,0:31:42.14:0,42,1394	0/0:31,0:31:12:0,12,239	1/1:6,9:15:24.08:611,24,0	1/1:10,5:15:12.04:306,12,0	1/1:20,13:33:38.98:628,39,0	0/0:19,0:30:30.07:0,30,623	0/0:14,0:30:66.21:0,66,1951	0/0:10,0:21:33.20:0,33,825	1/1:12,26:38:60.21:1528,60,0	1/1:10,23:33:45.15:1146,45,0	0/0:7,0:25:36.12:0,36,1182	0/0:11,0:36:69.21:0,69,2221	0/0:9,0:34:63.20:0,63,2098	1/1:12,16:28:36.12:917,36,0	0/0:17,0:19:28.27:0,28,655	0/0:11,0:25:57.13:0,57,1638	0/0:9,0:29:54.44:0,54,1934	0/0:23,0:53:78.26:0,78,2529	1/1:8,9:17:24.08:588,24,0	1/1:6,18:24:36.12:914,36,0	1/1:13,16:29:15.05:359,15,0	0/0:5,0:19:36.12:0,36,1201	0/0:19,0:37:72.24:0,72,2236	0/0:11,0:23:45.13:0,45,1366	0/0:2,0:16:24.08:0,24,840
chr10	60077477	.	G	GTCTGTCTGTCTGTCTGTCTG	3066.49	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=-8.756;DP=798;FS=9.242;HRun=0;HaplotypeScore=431.2863;InbreedingCoeff=0.5843;MQ=63.18;MQ0=9;MQRankSum=1.662;QD=13.75;ReadPosRankSum=-4.443;VQSLOD=0.0219;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:43,0:43:18.06:822,18,0	0/0:13,0:13:24.46:0,24,619	0/0:37,0:24:11.98:0,12,193	0/0:36,0:31:29.76:0,30,455	1/1:22,5:28:3.48:279,3,0	0/0:14,0:14:23.94:0,24,510	0/0:15,0:15:11.94:0,12,147	0/0:35,0:35:26.75:0,27,148	1/1:35,0:35:9.03:542,9,0	0/1:29,0:28:99:230,0,424	0/0:19,0:19:18.05:0,18,321	0/0:38,0:38:60.11:0,60,2008	0/0:33,0:33:48.59:0,49,1532	0/0:27,0:26:27.56:0,28,536	0/0:34,0:34:53.99:0,54,889	0/0:35,0:35:57.18:0,57,1158	0/0:29,0:29:51.03:0,51,985	1/1:19,0:19:24.08:1087,24,0	0/1:29,0:29:99:160,0,489	0/0:30,0:30:50.78:0,51,800	0/0:52,0:52:65.88:0,66,1122	0/0:12,0:12:21.04:0,21,770	0/0:24,0:24:34.25:0,34,304	0/0:29,0:29:24.03:0,24,864	0/0:21,0:21:33.11:0,33,635	0/1:40,0:38:99:109,0,746	0/0:26,0:24:32.94:0,33,575	0/0:15,0:15:24.08:0,24,449
chr10	60078568	.	CA	C	5205.61	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=13.039;DP=526;FS=1.184;HRun=3;HaplotypeScore=63.0929;InbreedingCoeff=0.9957;MQ=84.20;MQ0=0;MQRankSum=-2.483;QD=33.37;ReadPosRankSum=0.907;VQSLOD=5.1898;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:78.26:0,78,1108	1/1:0,6:6:18.06:223,18,0	0/0:20,0:21:56:0,56,682	0/0:13,0:13:22.98:0,23,274	0/0:13,0:13:39.13:0,39,562	1/1:0,13:13:39.12:483,39,0	1/1:3,14:17:39.12:483,39,0	1/1:1,11:12:33.10:409,33,0	0/0:10,0:10:30.10:0,30,431	0/0:19,0:19:57.18:0,57,806	0/0:13,0:13:36.12:0,36,518	1/1:1,23:24:69.22:855,69,0	1/1:1,12:13:36.11:446,36,0	0/0:24,0:24:63.21:0,63,906	0/0:22,0:22:57.19:0,57,821	0/0:32,0:32:96.31:0,96,1365	1/1:2,26:28:69.22:855,69,0	0/0:28,0:28:81.27:0,81,1167	0/0:15,0:15:39.13:0,39,561	0/0:14,0:14:42.14:0,42,605	0/0:40,0:40:99:0,114,1605	1/1:0,11:11:30.09:372,30,0	1/1:1,7:8:18.06:223,18,0	1/1:0,24:24:69.22:855,69,0	0/0:21,0:21:60.17:0,60,828	0/0:25,0:25:75.24:0,75,1064	0/0:27,0:27:78.26:0,78,1123	0/0:6,0:6:18.06:0,18,259
chr10	60078967	.	CCTT	C	3176.76	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=10.751;DP=754;FS=4.351;HRun=0;HaplotypeScore=104.8687;InbreedingCoeff=0.9793;MQ=80.20;MQ0=1;MQRankSum=-1.967;QD=38.27;ReadPosRankSum=0.789;VQSLOD=4.4593;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,141,3057	1/1:1,11:12:30.10:528,30,0	0/0:31,0:31:87.27:0,87,1867	0/0:22,0:22:60.53:0,61,1221	0/0:20,0:20:54.06:0,54,1170	0/0:21,0:20:60.08:0,60,1275	0/0:28,0:28:84.28:0,84,1880	1/1:3,30:33:90.23:1417,90,0	0/0:30,0:30:90.27:0,90,1960	0/0:37,0:37:99:0,111,2450	0/0:21,0:21:63.20:0,63,1368	0/0:27,0:27:81.25:0,81,1818	0/0:34,0:34:99:0,99,2133	0/0:32,0:32:96.30:0,96,2176	0/0:39,0:39:99:0,117,2448	0/0:32,0:32:95.86:0,96,2012	1/1:1,37:38:78.27:1374,78,0	0/0:16,0:16:48.10:0,48,991	0/0:15,0:15:45.14:0,45,997	0/0:15,0:15:41.94:0,42,798	0/0:47,0:46:99:0,135,3130	0/0:22,0:22:66.19:0,66,1464	0/0:16,0:16:48.15:0,48,1044	0/0:41,0:41:99:0,120,2680	0/0:25,0:24:75.26:0,75,1753	0/0:23,0:23:69.19:0,69,1379	0/0:26,0:26:78.24:0,78,1723	0/0:3,0:3:9.01:0,9,166
chr10	60080622	.	GGTGTGTGTGT	G	7538.13	PASS	AB=0.728;AC=41;AF=0.759;AN=54;BaseQRankSum=4.601;DP=531;FS=29.439;HRun=0;HaplotypeScore=155.6552;InbreedingCoeff=0.5127;MQ=62.06;MQ0=12;MQRankSum=-5.963;QD=18.75;ReadPosRankSum=1.972;VQSLOD=2.6006;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:23:27.09:0,27,696	1/1:4,0:8:2.86:69,3,0	0/0:26,0:17:3.01:0,3,44	0/0:15,0:12:6.02:0,6,85	0/0:9,0:17:17.98:0,18,497	1/1:8,11:21:18.06:490,18,0	1/1:10,9:19:15.05:447,15,0	1/1:33,0:31:0.47:1,0,0	0/0:14,0:16:15.05:0,15,407	1/1:14,4:21:21.07:567,21,0	0/1:10,4:15:99:230,0,100	1/1:7,4:12:11.64:338,12,0	1/1:13,6:20:12.60:395,13,0	1/1:4,3:7:3.01:89,3,0	1/1:12,6:18:24.08:663,24,0	1/1:8,4:12:14.37:416,14,0	0/1:15,0:28:78.70:465,0,79	0/1:8,0:12:3.23:3,0,636	1/1:14,3:17:9.01:203,9,0	1/1:10,2:11:3.01:89,3,0	./.	1/1:7,12:19:24.08:684,24,0	1/1:6,10:16:8.91:247,9,0	1/1:17,8:27:6.02:157,6,0	1/1:8,7:17:15.05:378,15,0	1/1:16,11:27:28.90:825,29,0	1/1:12,10:23:17.66:516,18,0	1/1:10,7:16:9.03:268,9,0
chr10	60080768	.	AT	A	1417.91	PASS	AB=0.760;AC=35;AF=0.625;AN=56;BaseQRankSum=-1.016;DP=483;FS=4.796;HRun=16;HaplotypeScore=71.2192;InbreedingCoeff=0.3012;MQ=70.75;MQ0=3;MQRankSum=0.008;QD=3.82;ReadPosRankSum=2.307;VQSLOD=0.7025;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,0:22:17.98:52,18,0	0/1:2,0:3:4.45:4,0,13	0/0:29,1:19:13.23:0,13,68	0/0:16,0:8:4.81:0,5,30	1/1:5,0:17:22:63,22,0	0/1:11,3:14:11.22:11,0,62	0/0:14,1:16:8.08:0,8,97	1/1:25,14:40:10.05:137,10,0	1/1:2,0:11:11.85:34,12,0	0/1:7,7:16:9.51:50,0,10	0/1:2,9:11:30.55:69,0,31	0/1:20,2:22:14.88:15,0,84	0/0:23,1:24:8.64:0,9,149	0/1:6,4:11:11.41:46,0,11	1/1:13,10:26:31.25:166,31,0	1/1:4,5:12:17.76:89,18,0	1/1:7,7:19:30.69:155,31,0	1/1:3,0:11:16.28:46,16,0	0/1:15,4:19:24.99:67,0,25	1/1:13,5:21:22.62:123,23,0	0/1:9,12:22:52.48:108,0,52	0/0:11,0:11:10.98:0,11,51	0/1:12,0:12:2.97:3,0,41	0/0:15,0:15:13.82:0,14,118	1/1:11,3:14:7.56:41,8,0	1/1:6,9:18:25.98:154,26,0	1/1:12,7:21:16.74:98,17,0	1/1:0,6:6:11.77:72,12,0
chr10	60080958	.	CT	C	8433.40	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=11.159;DP=649;FS=0.968;HRun=2;HaplotypeScore=68.6239;InbreedingCoeff=0.9953;MQ=82.17;MQ0=0;MQRankSum=-4.416;QD=34.99;ReadPosRankSum=2.050;VQSLOD=5.3606;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:90.27:0,90,1292	1/1:0,4:4:12.04:156,12,0	0/0:23,0:22:63.17:0,63,896	0/0:32,0:32:86.77:0,87,1224	0/0:21,0:21:60.20:0,60,894	1/1:0,25:25:63.20:818,63,0	1/1:2,23:25:66.68:852,67,0	1/1:1,42:43:99:1590,126,0	0/0:16,0:16:45.12:0,45,650	0/0:23,0:23:69.23:0,69,1034	0/0:23,0:23:63.19:0,63,905	1/1:0,22:22:60.20:779,60,0	1/1:1,38:39:99:1357,105,0	0/0:28,0:28:84.22:0,84,1192	0/0:33,0:33:99:0,99,1467	0/0:19,0:19:57.19:0,57,853	1/1:0,19:19:54.18:701,54,0	0/0:14,0:14:39.13:0,39,584	0/0:21,0:21:60.18:0,60,872	0/0:19,0:19:57.19:0,57,854	0/0:21,0:21:63.21:0,63,939	1/1:0,23:23:60.20:779,60,0	1/1:0,22:22:60.19:778,60,0	1/1:0,19:19:48.16:623,48,0	0/0:22,0:22:66.18:0,66,958	0/0:27,0:27:78.25:0,78,1134	0/0:23,0:22:69.23:0,69,1034	0/0:12,0:12:30.10:0,30,447
chr10	60081067	.	C	CA	2492.05	PASS	AB=0.806;AC=24;AF=0.429;AN=56;BaseQRankSum=-8.767;DP=583;FS=0.409;HRun=14;HaplotypeScore=83.9863;InbreedingCoeff=0.3464;MQ=65.10;MQ0=1;MQRankSum=-0.052;QD=7.02;ReadPosRankSum=-1.486;VQSLOD=2.4659;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:14:16.06:0,16,46	0/0:4,0:11:13.52:0,14,40	0/1:15,0:11:0.17:0,0,46	0/0:10,0:8:1.33:0,1,4	0/0:2,0:21:32.55:0,33,93	0/1:24,5:30:53.14:53,0,203	0/0:18,0:20:48.30:0,48,300	0/0:8,0:37:56.94:0,57,164	0/0:5,0:9:8.09:0,8,23	1/1:8,9:17:2.19:138,2,0	1/1:15,5:21:24.29:192,24,0	0/0:21,1:24:13.49:0,13,193	0/0:19,0:20:17.27:0,17,213	1/1:11,20:31:26.98:231,27,0	1/1:8,20:29:12.30:345,12,0	1/1:8,18:27:0.44:271,0,0	0/0:1,0:20:34.62:0,35,100	0/0:2,0:23:36.64:0,37,106	0/1:22,2:26:19.97:213,0,20	0/1:7,13:24:20.84:236,0,21	1/1:7,14:24:24.32:287,24,0	0/0:13,1:18:8.27:0,8,151	0/1:21,4:25:5.98:6,0,95	0/1:10,3:15:45.38:45,0,113	0/1:9,6:15:36.81:85,0,37	1/1:11,7:18:9.45:76,9,0	1/1:6,19:27:41.63:337,42,0	0/1:5,5:10:8.65:163,0,9
chr10	60084126	.	T	TTTATTA	3137.11	PASS	AB=1.000;AC=35;AF=0.972;AN=36;BaseQRankSum=0.267;DP=196;FS=3.181;HRun=0;HaplotypeScore=53.7764;InbreedingCoeff=-0.1188;MQ=68.85;MQ0=0;MQRankSum=-1.466;QD=18.67;ReadPosRankSum=-0.933;VQSLOD=2.6330;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,0:6:3.01:78,3,0	./.	./.	./.	1/1:7,0:7:6.02:152,6,0	1/1:5,0:5:6.02:155,6,0	./.	1/1:33,0:32:14.24:163,14,0	1/1:6,0:6:9.03:234,9,0	./.	1/1:6,1:7:6.02:132,6,0	1/1:7,0:7:12.03:243,12,0	1/1:1,0:1:3.01:68,3,0	1/1:1,0:3:5.88:37,6,0	1/1:4,0:5:2.94:18,3,0	1/1:6,0:6:3.01:64,3,0	1/1:23,0:23:18.06:338,18,0	0/1:12,0:12:44.49:193,0,44	1/1:7,2:9:6.02:194,6,0	./.	./.	./.	./.	./.	1/1:6,7:13:15.05:477,15,0	1/1:5,3:8:9.03:190,9,0	1/1:6,0:9:12.04:296,12,0	1/1:6,2:8:6.02:194,6,0
chr10	60084164	.	T	TATTATTATG	4261.25	PASS	AB=0.922;AC=32;AF=0.593;AN=54;BaseQRankSum=0.893;DP=195;FS=20.660;HRun=0;HaplotypeScore=50.7896;InbreedingCoeff=0.2263;MQ=72.94;MQ0=0;MQRankSum=-2.591;QD=26.30;ReadPosRankSum=1.647;VQSLOD=2.4128;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,0:8:3.01:130,3,0	1/1:1,0:1:2.98:22,3,0	0/0:8,0:6:17.99:0,18,178	0/0:6,0:4:6.33:0,6,67	1/1:1,7:12:20.71:363,21,0	1/1:3,2:5:14.94:335,15,0	1/1:2,0:2:5.99:49,6,0	1/1:25,0:28:81.04:879,81,0	1/1:0,7:11:9.50:447,10,0	0/0:4,0:4:6.01:0,6,56	0/1:6,0:6:19.57:20,0,112	1/1:6,2:9:23.91:537,24,0	1/1:1,0:2:6.01:108,6,0	0/0:5,0:5:14.88:0,15,115	0/0:4,0:4:11.96:0,12,101	0/1:4,0:5:84.84:85,0,95	1/1:15,0:19:35.52:441,36,0	0/1:2,0:12:26.61:27,0,46	0/1:5,0:5:68.98:69,0,71	0/0:4,0:4:12.01:0,12,108	0/0:2,0:2:6:0,6,54	./.	1/1:3,0:3:8.99:75,9,0	1/1:3,0:3:8.93:66,9,0	0/1:9,0:9:34.91:189,0,35	0/1:5,0:5:30.64:31,0,71	0/1:10,0:10:80.91:322,0,81	0/1:6,0:6:66.64:67,0,85
chr10	60086282	.	T	TA	5198.63	PASS	AB=0.711;AC=34;AF=0.607;AN=56;BaseQRankSum=-7.292;DP=654;FS=0.834;HRun=13;HaplotypeScore=101.5976;InbreedingCoeff=0.4924;MQ=75.83;MQ0=0;MQRankSum=-1.058;QD=10.50;ReadPosRankSum=-0.032;VQSLOD=4.2673;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,1:39:43:223,43,0	0/1:5,7:12:22.72:85,0,23	0/1:20,0:17:9.21:9,0,32	0/0:14,0:10:5.38:0,5,37	1/1:3,2:24:35.19:179,35,0	0/0:20,0:21:37.60:0,38,252	0/0:16,0:17:37.69:0,38,252	0/1:18,19:37:16.94:366,0,17	1/1:4,2:18:22.18:119,22,0	1/1:4,10:14:6.58:158,7,0	1/1:8,19:27:30.38:418,30,0	0/0:25,1:27:24.66:0,25,306	0/0:20,0:21:33.20:0,33,215	1/1:5,18:23:13.70:260,14,0	0/1:25,14:40:21.54:374,0,22	1/1:5,18:24:38.51:335,39,0	1/1:2,23:26:27.31:384,27,0	1/1:5,3:19:35.95:222,36,0	1/1:8,20:28:30.14:379,30,0	0/1:9,9:19:18.29:178,0,18	1/1:3,13:17:30.34:264,30,0	0/0:16,0:16:5.38:0,5,153	0/0:14,2:16:5.04:0,5,176	0/0:26,1:27:38.38:0,38,405	1/1:7,14:23:27.32:227,27,0	1/1:9,21:31:34.19:426,34,0	0/1:11,24:34:13.38:339,0,13	1/1:6,11:18:28.28:254,28,0
chr10	60086878	.	C	CAA	5361.75	PASS	AB=0.729;AC=46;AF=0.821;AN=56;BaseQRankSum=-1.322;DP=610;FS=1.633;HRun=16;HaplotypeScore=96.7612;InbreedingCoeff=0.0156;MQ=49.05;MQ0=33;MQRankSum=-2.614;QD=9.21;ReadPosRankSum=-0.284;VQSLOD=3.1072;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:24,5:28:0.76:157,0,1	1/1:7,0:13:23.24:248,23,0	0/0:27,0:9:10.67:0,11,68	0/1:27,0:7:11.33:38,0,11	0/1:19,2:25:13.28:206,0,13	0/1:3,3:10:7.39:116,0,7	1/1:2,4:11:24.01:250,24,0	1/1:30,0:29:27.42:202,27,0	1/1:13,0:20:8.99:80,9,0	1/1:14,10:29:51.13:464,51,0	1/1:8,5:18:21.55:182,22,0	0/1:6,3:15:3.05:97,0,3	1/1:13,1:20:34.83:339,35,0	1/1:12,2:14:11.87:108,12,0	1/1:11,6:18:1.92:192,2,0	1/1:15,10:28:7.97:312,8,0	1/1:26,0:24:24.66:181,25,0	1/1:13,1:20:23.23:298,23,0	0/1:13,0:18:13.98:106,0,14	0/1:12,11:22:3.10:234,0,3	1/1:7,2:11:10.12:62,10,0	1/1:16,2:27:18.62:307,19,0	1/1:9,1:18:6.26:138,6,0	1/1:9,3:12:12.44:112,12,0	0/1:9,12:22:30.60:249,0,31	1/1:13,8:29:29.41:345,29,0	1/1:11,12:30:9.43:254,9,0	1/1:7,2:7:8.39:82,8,0
chr10	60089227	.	G	GGA	2037.75	PASS	AB=0.809;AC=18;AF=0.321;AN=56;BaseQRankSum=3.867;DP=728;FS=13.003;HRun=0;HaplotypeScore=118.1867;InbreedingCoeff=0.7667;MQ=48.59;MQ0=36;MQRankSum=-1.526;QD=9.66;ReadPosRankSum=-4.030;VQSLOD=1.2908;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:38.53:0,39,577	1/1:8,0:8:8.46:64,8,0	0/0:90,0:22:18.45:0,18,161	0/0:106,0:17:9.89:0,10,127	0/0:17,0:17:26.91:0,27,331	0/1:15,0:14:13.33:243,0,13	0/1:11,18:28:0:0,0,0	1/1:27,0:26:48.08:644,48,0	0/0:19,0:19:41.13:0,41,461	0/0:15,0:14:22.38:0,22,239	0/0:14,0:14:20.73:0,21,230	1/1:30,0:30:6.85:103,7,0	1/1:21,0:21:11.16:94,11,0	0/0:19,0:19:24.02:0,24,319	0/0:24,0:24:41.13:0,41,460	0/0:36,0:36:41.54:0,42,587	1/1:17,0:17:2.94:32,3,0	0/0:11,0:11:17.78:0,18,186	0/0:21,0:20:35.95:0,36,400	0/0:14,0:14:8.39:0,8,110	0/0:30,0:28:0.12:0,0,534	1/1:19,0:18:11.62:120,12,0	1/1:19,0:19:30.99:453,31,0	1/1:25,1:25:23.70:473,24,0	0/0:24,0:23:56.55:0,57,613	0/0:21,0:21:32.53:0,33,396	0/0:14,0:14:20.43:0,20,225	0/0:13,0:12:17.72:0,18,245
chr10	60089234	.	GAGAGAGAA	G	2627.56	PASS	AB=0.982;AC=32;AF=0.571;AN=56;BaseQRankSum=10.339;DP=700;FS=15.526;HRun=0;HaplotypeScore=156.6026;InbreedingCoeff=-0.0967;MQ=48.82;MQ0=33;MQRankSum=-2.417;QD=4.33;ReadPosRankSum=-1.627;VQSLOD=1.7719;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:38.95:0,39,492	1/1:8,0:8:8.82:116,9,0	0/1:75,0:16:62.77:63,0,88	0/1:89,0:13:34.80:35,0,84	0/0:18,0:18:27.47:0,27,404	1/1:16,0:15:5.76:220,6,0	1/1:25,0:24:5.58:35,6,0	0/1:26,0:25:9.70:237,0,10	0/1:21,0:21:25.46:25,0,271	0/1:14,0:13:41.13:41,0,147	0/1:17,0:17:41.49:41,0,117	1/1:29,0:28:18.86:361,19,0	1/1:21,1:22:6.34:159,6,0	0/1:22,0:22:83.45:83,0,178	0/1:23,0:23:87.93:88,0,236	0/1:35,0:35:65.47:65,0,342	1/1:18,0:18:6.49:99,6,0	0/0:10,0:10:20.82:0,21,239	0/1:14,4:17:99:164,0,193	0/1:13,1:14:9.53:10,0,72	0/1:28,0:27:99:195,0,268	1/1:18,0:17:21.49:131,21,0	1/1:21,0:21:12.88:211,13,0	1/1:29,0:28:31.05:272,31,0	0/1:24,0:23:64.56:65,0,299	0/0:21,0:21:2.95:0,3,243	0/1:15,0:14:63.75:90,0,64	0/0:14,0:13:25.29:0,25,179
chr10	60089236	.	GAGAGAA	G	2037.52	PASS	AB=0.996;AC=31;AF=0.554;AN=56;BaseQRankSum=10.814;DP=690;FS=25.717;HRun=0;HaplotypeScore=143.1392;InbreedingCoeff=-0.0567;MQ=49.01;MQ0=34;MQRankSum=-2.403;QD=3.38;ReadPosRankSum=-2.120;VQSLOD=0.8092;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:30:24.65:25,0,369	1/1:8,0:8:8.79:82,9,0	0/1:70,0:15:59.08:59,0,88	0/1:80,0:11:35.74:36,0,84	0/0:16,0:16:27.47:0,27,309	0/1:16,0:15:17.32:163,0,17	1/1:26,1:26:5.59:35,6,0	0/1:24,0:22:5.18:237,0,5	0/1:20,0:20:0.81:1,0,271	0/1:13,0:12:19.47:19,0,175	0/1:16,1:17:9.90:10,0,117	1/1:13,15:27:22.24:327,22,0	1/1:8,13:21:14.84:202,15,0	0/1:21,0:20:19.91:20,0,178	0/1:24,0:24:11.53:12,0,245	0/1:36,0:36:8.48:8,0,344	1/1:19,0:19:6.48:61,6,0	0/0:10,0:10:20.76:0,21,204	0/1:17,0:16:87.08:87,0,194	0/1:13,0:13:28.31:28,0,71	0/1:29,0:28:92.73:93,0,275	1/1:19,1:19:21.61:127,22,0	1/1:23,0:23:28.92:258,29,0	1/1:26,2:27:42.53:286,43,0	0/0:25,0:24:8.30:0,8,334	0/0:22,0:22:16.79:0,17,282	0/1:16,0:15:40.78:41,0,75	0/0:14,0:13:25.32:0,25,180
chr10	60089238	.	GAGAA	G	1862.71	PASS	AB=0.999;AC=30;AF=0.536;AN=56;BaseQRankSum=10.138;DP=673;FS=44.549;HRun=0;HaplotypeScore=129.5403;InbreedingCoeff=0.1091;MQ=48.68;MQ0=30;MQRankSum=-0.730;QD=3.58;ReadPosRankSum=-2.627;VQSLOD=0.2144;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:29:31.53:32,0,365	1/1:1,7:8:8.81:84,9,0	0/1:64,0:12:54.66:55,0,89	0/1:68,0:11:35.74:36,0,84	0/0:15,0:15:25.22:0,25,222	1/1:14,0:15:4.98:178,5,0	1/1:26,1:27:8.86:61,9,0	0/1:24,0:21:6.09:237,0,6	0/0:21,0:21:14.85:0,15,286	0/1:14,0:13:36.19:36,0,183	0/1:17,0:17:5.29:5,0,117	1/1:26,0:25:20.78:251,21,0	1/1:21,0:21:14.95:172,15,0	0/0:22,0:21:6.93:0,7,186	0/0:24,0:24:19.99:0,20,291	0/0:34,0:34:31.86:0,32,382	1/1:1,17:18:3.48:55,3,0	0/0:12,0:12:4.70:0,5,147	0/1:17,0:16:48.16:48,0,199	0/1:14,0:14:65.97:71,0,66	0/1:32,0:31:80.22:80,0,321	1/1:3,15:18:21.51:126,22,0	1/1:23,0:23:29.24:242,29,0	1/1:28,0:27:25.98:241,26,0	0/0:24,0:23:29.26:0,29,376	0/1:21,0:21:2.19:2,0,261	0/1:16,0:15:17.08:17,0,73	0/1:16,0:15:15.52:16,0,149
chr10	60089242	.	AAGAGAGAG	A	2315.01	PASS	AB=0.936;AC=34;AF=0.654;AN=52;BaseQRankSum=0.295;DP=654;FS=5.929;HRun=0;HaplotypeScore=161.5730;InbreedingCoeff=0.0826;MQ=47.95;MQ0=28;MQRankSum=-1.867;QD=4.98;ReadPosRankSum=2.699;VQSLOD=2.3304;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:21.49:0,21,233	1/1:8,0:8:6:66,6,0	./.	./.	0/0:16,0:15:12.92:0,13,230	0/1:20,0:19:12.42:52,0,12	0/1:29,0:29:0.01:3,0,0	0/0:23,0:20:2.96:0,3,20	1/1:19,0:19:3.01:69,3,0	0/1:15,0:14:26.27:133,0,26	1/1:8,9:17:10.88:104,11,0	0/1:25,0:25:6.50:254,0,7	0/1:17,0:17:11.19:101,0,11	1/1:11,13:23:6.02:150,6,0	1/1:12,10:23:3.82:166,4,0	1/1:14,21:35:8.80:173,9,0	1/1:19,0:19:8.70:65,9,0	0/0:8,0:13:12.93:0,13,213	1/1:20,0:19:12.31:250,12,0	1/1:13,0:13:5.63:36,6,0	0/1:32,0:31:2.25:323,0,2	1/1:20,0:19:2.20:7,2,0	0/1:23,0:23:11.24:11,0,34	0/1:27,0:29:24.82:25,0,45	1/1:22,1:22:17.97:271,18,0	0/1:13,0:19:18.48:18,0,51	0/1:5,9:15:7.59:176,0,8	1/1:16,0:15:5.61:16,6,0
chr10	60089275	.	AGAGAGAGAGAGAGT	A	3985.51	PASS	AB=0.884;AC=22;AF=0.393;AN=56;BaseQRankSum=2.351;DP=658;FS=0.384;HRun=0;HaplotypeScore=231.9552;InbreedingCoeff=0.6276;MQ=56.61;MQ0=12;MQRankSum=-2.895;QD=12.77;ReadPosRankSum=2.635;VQSLOD=2.2274;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:29:81.75:82,0,295	1/1:12,0:12:17.53:111,18,0	0/0:21,0:10:23.19:0,23,281	0/0:23,0:10:19.75:0,20,164	0/0:17,0:16:3.51:0,4,435	1/1:18,0:18:41.20:585,41,0	1/1:30,0:29:57.94:609,58,0	1/1:23,0:21:3.52:276,4,0	0/0:15,0:15:8.66:0,9,57	0/0:17,0:16:42.35:0,42,696	0/0:14,0:14:15.02:0,15,170	1/1:27,1:26:37.94:687,38,0	1/1:22,0:22:38.03:402,38,0	0/0:30,0:29:45.14:0,45,424	0/0:33,0:33:30.31:0,30,537	0/1:33,0:33:34.42:34,0,319	1/1:23,0:23:25.12:160,25,0	0/1:16,0:16:99:120,0,228	0/0:26,0:25:43.37:0,43,618	0/0:18,0:17:10.90:0,11,401	0/0:35,0:34:24.32:0,24,908	1/1:21,0:20:29.50:295,29,0	0/1:3,19:22:14.05:46,0,14	1/1:35,0:34:48.61:579,49,0	0/0:27,0:26:30.36:0,30,482	0/0:28,0:28:11.29:0,11,673	0/0:21,0:20:22.53:0,23,358	0/0:21,0:19:10.28:0,10,297
chr10	60089279	.	AGAGAGAGAGT	A	4182.22	PASS	AB=0.996;AC=32;AF=0.571;AN=56;BaseQRankSum=4.987;DP=645;FS=2.206;HRun=0;HaplotypeScore=193.7175;InbreedingCoeff=0.1286;MQ=58.01;MQ0=12;MQRankSum=-2.717;QD=8.12;ReadPosRankSum=2.222;VQSLOD=2.5444;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:29:99:149,0,136	1/1:13,0:13:32.26:322,32,0	0/0:23,0:11:26.19:0,26,291	0/0:30,0:16:33.65:0,34,295	0/1:17,0:16:83.09:83,0,211	1/1:16,1:17:39.66:398,40,0	1/1:30,0:29:52.57:409,53,0	1/1:24,0:22:44.51:422,45,0	1/1:16,0:16:3.01:41,3,0	0/0:15,0:14:30.20:0,30,328	0/0:13,0:13:4.65:0,5,112	1/1:25,3:26:34.94:509,35,0	1/1:23,1:24:35.16:337,35,0	0/1:25,0:24:8.69:9,0,182	0/1:31,0:31:62.07:62,0,343	0/1:31,0:31:61.10:61,0,129	1/1:24,0:24:31.54:335,32,0	0/1:15,0:15:99:124,0,119	0/1:26,0:25:60.26:60,0,428	0/1:17,0:16:1.96:2,0,261	0/1:27,0:26:99:114,0,431	1/1:20,0:19:35.28:276,35,0	0/1:21,1:22:10.80:38,0,11	1/1:35,0:34:36.01:278,36,0	0/1:23,0:22:71.44:71,0,268	0/0:29,0:29:49.41:0,49,719	0/1:21,0:20:81.16:81,0,166	0/0:20,0:18:41.26:0,41,364
chr10	60089281	.	AGAGAGAGT	A	4502.71	PASS	AB=1.000;AC=33;AF=0.589;AN=56;BaseQRankSum=3.320;DP=655;FS=1.664;HRun=0;HaplotypeScore=178.6889;InbreedingCoeff=0.0071;MQ=58.68;MQ0=12;MQRankSum=-2.551;QD=8.51;ReadPosRankSum=0.090;VQSLOD=3.3823;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:32,0:32:16.70:243,0,17	1/1:13,1:14:32.74:286,33,0	0/0:24,0:12:29.20:0,29,323	0/0:34,0:20:35.78:0,36,346	0/1:19,0:18:99:122,0,113	1/1:17,0:17:37.23:328,37,0	1/1:31,0:30:56.38:435,56,0	1/1:27,0:25:63.74:560,64,0	1/1:0,14:14:3.01:86,3,0	0/1:15,0:14:36.79:37,0,233	0/1:13,0:13:26.88:38,0,27	1/1:28,1:27:31.49:467,31,0	1/1:24,0:24:29.56:312,30,0	0/1:24,0:23:81.83:82,0,182	0/1:31,0:31:55.19:55,0,371	0/1:31,0:31:87.59:88,0,149	1/1:24,0:24:22.75:259,23,0	0/1:15,0:15:90.48:124,0,90	0/1:26,0:25:79.71:80,0,384	0/0:17,0:16:4.93:0,5,231	0/1:28,0:27:99:133,0,367	1/1:18,0:17:35.40:267,35,0	0/1:22,0:22:9.06:27,0,9	1/1:33,0:32:30.06:289,30,0	0/1:21,0:20:99:107,0,205	0/0:30,0:30:66.07:0,66,771	0/1:21,0:20:77.06:77,0,198	0/0:21,0:19:54.88:0,55,487
chr10	60095502	.	T	TA	1801.46	PASS	AB=0.971;AC=8;AF=0.143;AN=56;BaseQRankSum=-9.767;DP=535;FS=4.544;HRun=9;HaplotypeScore=80.3954;InbreedingCoeff=0.7505;MQ=61.48;MQ0=0;MQRankSum=0.863;QD=18.38;ReadPosRankSum=-3.107;VQSLOD=2.9468;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:32:70.08:0,70,656	1/1:1,7:9:23.86:232,24,0	0/1:5,0:4:3.08:3,0,43	0/0:6,0:5:9.47:0,9,79	0/0:24,0:24:65.97:0,66,569	0/0:19,0:19:44.94:0,45,384	0/0:12,0:12:2.80:0,3,249	1/1:11,25:36:72.17:780,72,0	0/0:17,0:17:47.99:0,48,416	0/0:11,0:11:23.47:0,23,192	0/0:22,1:23:36.54:0,37,536	0/0:25,0:25:65.98:0,66,573	0/0:21,0:21:59.98:0,60,521	0/0:23,0:23:56.98:0,57,495	0/0:18,0:18:44.99:0,45,391	0/0:17,0:17:35.99:0,36,313	1/1:2,30:32:84.23:929,84,0	0/0:26,0:25:65.96:0,66,572	0/0:25,1:26:40.33:0,40,559	0/0:22,0:22:50.96:0,51,438	0/0:18,0:18:44.99:0,45,390	0/0:13,0:13:35.99:0,36,312	0/1:15,1:16:0.21:0,0,227	0/0:13,0:13:35.98:0,36,313	0/0:21,0:21:53.86:0,54,458	0/0:25,0:25:62.98:0,63,547	0/0:18,0:18:41.98:0,42,365	0/0:7,0:7:21:0,21,182
chr10	60095683	.	TATTTA	T	2754.52	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=3.960;DP=532;FS=5.317;HRun=0;HaplotypeScore=94.6663;InbreedingCoeff=0.9460;MQ=58.13;MQ0=49;MQRankSum=-7.520;QD=37.22;ReadPosRankSum=-3.171;VQSLOD=2.6720;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:47:99:0,132,3681	1/1:0,9:9:12.04:279,12,0	0/0:13,0:10:27.07:0,27,616	0/0:12,0:8:17.41:0,17,285	0/0:25,0:23:69.14:0,69,1690	0/0:25,0:25:47.18:0,47,1168	0/0:15,0:15:20.12:0,20,516	1/1:12,24:31:75.70:1757,76,0	0/0:11,0:10:30.10:0,30,904	0/0:18,0:15:45.12:0,45,1243	0/0:23,0:22:46.51:0,47,1207	0/0:8,0:8:24.07:0,24,455	0/0:13,0:11:30.09:0,30,576	0/0:20,0:18:54.08:0,54,1393	0/0:10,0:9:27.09:0,27,825	0/0:12,0:10:30.09:0,30,808	1/1:7,19:18:39.13:858,39,0	0/0:36,0:26:69.17:0,69,1796	0/0:15,0:12:36.12:0,36,876	0/0:24,0:23:69.09:0,69,1776	0/0:13,0:11:33.11:0,33,876	0/0:5,0:5:6.11:0,6,251	0/0:11,0:11:30.10:0,30,630	0/0:15,0:10:30.10:0,30,650	0/0:19,0:17:48.16:0,48,1468	0/0:27,0:26:78.20:0,78,2038	0/0:19,0:19:57.19:0,57,1571	0/0:17,0:16:48.14:0,48,1229
chr10	60095688	.	AT	A	1705.34	PASS	AB=0.900;AC=15;AF=0.268;AN=56;BaseQRankSum=6.227;DP=527;FS=4.383;HRun=9;HaplotypeScore=61.0647;InbreedingCoeff=0.8770;MQ=54.40;MQ0=58;MQRankSum=2.493;QD=15.79;ReadPosRankSum=1.149;VQSLOD=3.8516;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:53,1:48:92.89:0,93,1318	0/0:9,0:9:7.22:0,7,24	0/0:11,0:8:15.03:0,15,163	0/0:10,0:6:8.98:0,9,80	0/0:20,0:17:51.12:0,51,567	1/1:0,24:24:69.04:631,69,0	1/1:2,13:15:24.01:220,24,0	0/0:36,0:29:28.16:0,28,114	0/0:12,0:11:33.10:0,33,379	0/0:18,0:15:39.12:0,39,449	0/0:23,1:23:21.18:0,21,458	1/1:1,6:7:21.01:192,21,0	1/1:4,8:10:21.01:192,21,0	0/1:15,2:16:10.44:10,0,379	0/0:10,0:9:27.05:0,27,291	0/0:11,0:9:24.07:0,24,277	0/0:31,0:19:10.95:0,11,41	0/0:35,0:25:51.15:0,51,589	0/0:14,0:11:27.08:0,27,312	0/0:24,0:24:59.95:0,60,640	0/0:14,0:11:27.08:0,27,309	1/1:0,5:5:15.01:137,15,0	1/1:1,11:12:29.89:274,30,0	1/1:6,9:10:27.01:247,27,0	0/0:20,0:18:51.15:0,51,585	0/0:28,0:25:66.18:0,66,749	0/0:21,0:20:47.43:0,47,559	0/0:16,0:15:39.12:0,39,450
chr10	60100524	.	T	TGA	12627.28	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-14.866;DP=765;FS=0.291;HRun=0;HaplotypeScore=88.4216;InbreedingCoeff=0.9999;MQ=57.24;MQ0=1;MQRankSum=-1.779;QD=43.39;ReadPosRankSum=0.742;VQSLOD=6.4463;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,108,1547	1/1:0,15:16:39.13:711,39,0	0/0:20,0:17:48.16:0,48,687	0/0:27,0:23:59.32:0,59,856	0/0:32,0:32:87.29:0,87,1245	1/1:3,17:20:39.13:711,39,0	1/1:4,33:37:96.33:1755,96,0	1/1:6,19:27:63.19:1094,63,0	0/0:30,0:30:87.28:0,87,1228	0/0:32,0:32:87.29:0,87,1247	0/0:17,0:17:48.16:0,48,683	1/1:2,31:33:84.29:1535,84,0	1/1:2,29:31:72.25:1310,72,0	0/0:24,0:24:72.24:0,72,1031	0/0:30,0:30:81.26:0,81,1143	0/0:29,0:29:78.26:0,78,1117	1/1:2,32:34:84.29:1539,84,0	0/0:31,0:31:90.28:0,90,1269	0/0:22,0:20:57.19:0,57,817	0/0:22,0:22:63.20:0,63,885	0/0:43,0:43:99:0,129,1791	1/1:0,24:25:66.23:1201,66,0	1/1:4,28:32:69.24:1254,69,0	1/1:4,31:36:84.29:1517,84,0	0/0:15,0:15:36.10:0,36,495	0/0:29,0:29:81.26:0,81,1144	0/0:20,0:20:57.19:0,57,815	0/0:10,0:10:30.10:0,30,430
chr10	60101031	.	ATG	A	3723.33	PASS	AB=0.642;AC=13;AF=0.232;AN=56;BaseQRankSum=6.309;DP=811;FS=2.122;HRun=0;HaplotypeScore=210.0856;InbreedingCoeff=0.2910;MQ=67.55;MQ0=3;MQRankSum=-1.938;QD=14.21;ReadPosRankSum=2.176;VQSLOD=3.7215;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:59,0:59:99:0,169,3209	0/1:6,7:13:43.84:154,0,44	0/0:40,0:29:84.20:0,84,1387	0/0:30,0:24:69.23:0,69,1033	0/0:16,0:16:43.36:0,43,825	1/1:5,14:19:7:332,7,0	0/1:18,12:30:21.82:237,0,22	0/1:15,8:23:99:139,0,105	0/0:41,0:41:99:0,120,2250	0/0:26,0:26:75.14:0,75,1195	0/0:14,0:14:38.79:0,39,651	0/1:13,22:35:14.42:589,0,14	0/1:8,21:29:0.09:482,0,0	0/0:25,0:25:47.93:0,48,921	0/0:41,0:41:63.22:0,63,1207	0/0:34,0:34:78.25:0,78,1469	0/1:5,14:19:14.16:308,0,14	0/0:13,0:13:34.35:0,34,667	0/0:26,0:26:76.51:0,77,925	0/0:27,0:27:59.47:0,59,1212	0/0:41,0:41:84.20:0,84,1426	0/1:9,15:24:39.84:298,0,40	1/1:4,24:28:13.96:464,14,0	1/1:15,27:42:1.35:721,1,0	0/0:16,0:16:27.09:0,27,520	0/0:37,0:37:96.85:0,97,1743	0/0:42,0:42:58.37:0,58,1154	0/0:21,0:21:33.11:0,33,625
chr10	60101034	.	AT	A	2394.31	PASS	AB=0.694;AC=14;AF=0.250;AN=56;BaseQRankSum=11.823;DP=807;FS=2.199;HRun=1;HaplotypeScore=196.9622;InbreedingCoeff=0.1726;MQ=69.46;MQ0=3;MQRankSum=-1.959;QD=8.23;ReadPosRankSum=2.325;VQSLOD=1.2177;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:59,0:59:99:0,174,2666	0/1:8,7:15:16.44:126,0,16	0/0:39,0:28:82.47:0,82,1191	0/0:31,0:25:72.18:0,72,974	0/0:15,0:15:43.03:0,43,663	1/1:6,14:20:0.92:227,1,0	0/1:17,12:29:44.04:146,0,44	0/1:16,8:24:47.66:48,0,129	0/0:38,0:38:99:0,111,1751	0/0:27,0:27:79.82:0,80,612	0/0:13,0:13:38.29:0,38,263	0/1:12,22:34:29.38:403,0,29	1/1:6,21:27:5.98:334,6,0	0/0:25,0:25:46.88:0,47,316	0/0:42,0:42:61.78:0,62,376	0/0:34,0:34:70.86:0,71,521	0/1:6,14:20:18.59:233,0,19	0/0:12,0:12:34:0,34,524	0/0:27,0:27:79.97:0,80,671	0/1:28,0:28:19.06:19,0,438	0/0:36,0:36:64.93:0,65,478	0/1:8,15:23:27.52:191,0,28	1/1:5,24:29:37.65:342,38,0	0/1:15,27:42:8.54:488,0,9	0/0:19,0:19:26.55:0,27,189	0/0:36,0:36:74.37:0,74,686	0/0:42,0:42:54.41:0,54,419	0/0:21,0:21:32.43:0,32,227
chr10	60101035	.	T	TGAA	15709	PASS	AB=0.650;AC=43;AF=0.768;AN=56;BaseQRankSum=-1.339;DP=821;FS=11.242;HRun=0;HaplotypeScore=182.1979;InbreedingCoeff=0.8993;MQ=69.46;MQ0=3;MQRankSum=0.103;QD=25.05;ReadPosRankSum=2.067;VQSLOD=4.4429;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:60,0:60:99:0,168,2352	1/1:13,0:13:20.40:149,20,0	0/0:39,0:28:68.28:0,68,914	0/0:30,0:25:49.14:0,49,591	0/0:15,0:15:45.10:0,45,628	1/1:20,0:20:28.35:153,28,0	1/1:30,0:30:33.09:349,33,0	1/1:24,0:24:64.51:524,65,0	0/0:38,0:38:99:0,105,1554	1/1:5,23:28:57.91:1232,58,0	0/1:6,7:13:16.12:456,0,16	1/1:35,0:35:70.44:410,70,0	1/1:28,0:28:46.39:260,46,0	1/1:0,24:25:45.02:990,45,0	1/1:0,42:43:63.22:1387,63,0	1/1:4,30:34:60.21:1322,60,0	1/1:20,0:20:35.25:186,35,0	0/0:12,0:12:33.09:0,33,485	1/1:7,24:31:72.08:958,72,0	1/1:5,24:29:57.92:1226,58,0	1/1:2,34:36:39.21:1232,39,0	1/1:23,0:23:42.18:273,42,0	1/1:29,0:29:25.37:164,25,0	1/1:42,0:42:83:467,83,0	1/1:2,18:20:24.08:528,24,0	1/1:5,31:38:88.05:1807,88,0	1/1:5,39:44:20.04:976,20,0	1/1:2,20:22:30.10:660,30,0
chr10	60102336	.	CAACAACA	C	2060.78	PASS	AB=0.910;AC=27;AF=0.482;AN=56;BaseQRankSum=-1.797;DP=453;FS=28.058;HRun=0;HaplotypeScore=139.8178;InbreedingCoeff=-0.2367;MQ=44.47;MQ0=32;MQRankSum=2.822;QD=6.28;ReadPosRankSum=-1.985;VQSLOD=0.9480;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:18,0:16:32.51:33,0,112	1/1:6,0:6:9.41:79,9,0	0/0:39,0:15:41.34:0,41,1097	0/0:39,0:15:30.95:0,31,933	0/1:15,0:15:21.92:22,0,222	0/1:9,5:14:17.21:17,0,21	0/1:8,13:19:28.27:325,0,28	1/1:9,17:24:50.76:981,51,0	0/1:20,0:19:38.75:39,0,290	0/1:17,0:15:35.02:35,0,313	0/0:15,0:12:6.11:0,6,74	0/1:13,2:13:20.44:225,0,20	1/1:7,0:4:5.21:31,5,0	0/1:14,0:11:39.44:39,0,130	0/1:12,0:12:16.53:75,0,17	0/1:21,0:21:19.38:19,0,402	0/1:9,5:14:38.54:39,0,80	0/1:10,0:10:58.69:59,0,105	0/0:12,0:11:14.37:0,14,283	0/1:15,0:15:40.96:41,0,77	0/1:19,0:19:8.23:8,0,128	1/1:6,1:3:2.98:22,3,0	1/1:9,0:8:6.69:63,7,0	0/1:6,8:12:0:0,0,0	0/0:16,0:14:7.71:0,8,208	0/1:19,0:19:69.47:69,0,370	0/1:10,0:10:3.65:4,0,244	0/0:2,0:2:6.02:0,6,75
chr10	60102339	.	CAACA	C	4024.30	PASS	AB=0.915;AC=39;AF=0.696;AN=56;BaseQRankSum=-4.295;DP=451;FS=7.687;HRun=0;HaplotypeScore=120.3884;InbreedingCoeff=0.1434;MQ=44.00;MQ0=33;MQRankSum=4.572;QD=11.30;ReadPosRankSum=-2.028;VQSLOD=2.4105;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:15,2:16:10.39:141,10,0	1/1:6,0:6:13.26:61,13,0	0/0:37,0:12:34.67:0,35,681	0/0:40,0:15:27.73:0,28,646	1/1:12,0:12:12.29:187,12,0	0/1:14,0:13:12.55:13,0,13	1/1:19,0:20:7:202,7,0	1/1:25,0:23:43.57:490,44,0	0/1:17,2:19:35.64:353,0,36	1/1:18,0:17:1.77:288,2,0	0/0:11,5:13:4.55:0,5,14	1/1:13,0:11:8.98:68,9,0	1/1:5,0:3:4.24:27,4,0	1/1:16,1:14:15.44:248,15,0	1/1:11,0:11:20.14:310,20,0	0/1:19,2:20:11.35:259,0,11	1/1:15,0:15:13.21:99,13,0	1/1:10,0:9:15.82:212,16,0	0/1:12,0:11:0.51:82,0,1	0/1:14,2:16:14.42:190,0,14	0/1:10,9:19:11.63:12,0,42	1/1:6,0:3:2.98:22,3,0	1/1:8,0:8:5.68:63,6,0	1/1:12,0:14:5.15:21,5,0	0/1:16,0:14:4.73:120,0,5	0/1:16,0:16:0.67:420,0,1	0/1:11,0:11:6.73:133,0,7	0/0:1,0:1:1.25:0,1,3
chr10	60102340	.	A	AC	4373.73	PASS	AB=0.748;AC=43;AF=0.768;AN=56;BaseQRankSum=3.945;DP=448;FS=0.000;HRun=1;HaplotypeScore=111.0713;InbreedingCoeff=0.1728;MQ=43.83;MQ0=33;MQRankSum=1.800;QD=11.82;ReadPosRankSum=1.957;VQSLOD=3.2166;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,6:17:14.74:145,15,0	1/1:2,4:6:14.35:98,14,0	0/0:38,0:12:32.94:0,33,456	0/0:39,0:14:41.91:0,42,508	1/1:5,6:11:20.80:200,21,0	0/1:8,7:13:3.02:76,0,3	1/1:16,6:20:2.77:105,3,0	0/1:23,2:23:99:108,0,153	1/1:13,7:19:36.23:418,36,0	0/1:11,8:17:23.82:393,0,24	1/1:8,8:13:5.87:68,6,0	1/1:8,7:11:16.65:105,17,0	1/1:2,3:2:5.98:63,6,0	1/1:8,8:14:25.62:216,26,0	1/1:5,6:11:23.99:222,24,0	1/1:9,12:20:38.27:434,38,0	0/1:7,9:15:14.20:192,0,14	1/1:4,6:9:20.81:198,21,0	0/1:7,4:10:99:132,0,135	0/1:10,6:16:20.49:196,0,20	0/1:15,4:19:28.35:28,0,79	1/1:3,4:3:3.01:44,3,0	1/1:5,4:8:5.57:27,6,0	1/1:14,2:14:8.07:34,8,0	1/1:6,10:14:11.20:194,11,0	1/1:11,6:16:17.78:395,18,0	1/1:9,2:11:9.26:282,9,0	0/0:1,0:1:2.97:0,3,20
chr10	60102342	.	CA	C	3070.30	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=2.668;DP=444;FS=0.856;HRun=2;HaplotypeScore=112.9827;InbreedingCoeff=0.5574;MQ=43.03;MQ0=34;MQRankSum=1.471;QD=8.32;ReadPosRankSum=3.057;VQSLOD=1.2882;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:13,5:16:17.12:113,17,0	1/1:4,1:5:10.62:54,11,0	0/0:36,0:10:27.05:0,27,326	0/0:39,0:14:33.56:0,34,388	1/1:11,0:11:20.43:138,20,0	1/1:11,4:13:4.93:50,5,0	1/1:18,4:20:24.81:172,25,0	1/1:26,0:24:30.65:282,31,0	1/1:15,3:17:34.75:229,35,0	1/1:14,5:17:36.67:252,37,0	1/1:15,1:13:3.48:13,3,0	1/1:8,4:8:8.19:46,8,0	1/1:3,3:3:8.20:53,8,0	1/1:13,3:13:26.08:172,26,0	1/1:10,1:11:23.08:164,23,0	1/1:19,1:19:34.91:229,35,0	1/1:8,8:15:18.78:122,19,0	1/1:10,1:10:17.21:142,17,0	1/1:14,0:13:20.86:133,21,0	1/1:16,0:16:8.52:134,9,0	1/1:21,2:22:4.70:70,5,0	1/1:3,4:3:2.98:22,3,0	1/1:7,1:7:2.92:17,3,0	1/1:12,4:14:5.15:21,5,0	1/1:13,2:13:14.85:114,15,0	1/1:16,1:16:40.25:306,40,0	1/1:10,0:10:19.75:116,20,0	1/1:0,1:1:3.01:37,3,0
chr10	60102343	.	A	AC	6442.47	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=2.246;DP=553;FS=1.828;HRun=1;HaplotypeScore=155.9565;InbreedingCoeff=0.6183;MQ=40.56;MQ0=34;MQRankSum=1.474;QD=13.51;ReadPosRankSum=2.818;VQSLOD=4.3965;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:24,2:22:17.57:171,18,0	1/1:3,3:6:11.90:117,12,0	0/0:36,0:10:27.05:0,27,326	0/0:40,0:14:33.51:0,34,379	1/1:13,5:18:21.34:213,21,0	1/1:18,4:20:11.56:109,12,0	1/1:25,4:26:27.04:307,27,0	1/1:28,2:28:42.97:425,43,0	1/1:16,1:20:38.37:407,38,0	1/1:20,6:24:57.73:664,58,0	1/1:9,6:13:5.86:69,6,0	1/1:14,6:16:17.91:201,18,0	1/1:7,1:5:12.02:147,12,0	1/1:10,6:15:29.54:343,30,0	1/1:9,4:14:24.02:239,24,0	1/1:13,7:24:30.49:430,30,0	1/1:14,2:15:20.56:283,21,0	1/1:10,5:14:29.43:311,29,0	1/1:13,2:16:28.73:387,29,0	1/1:14,5:20:4.44:198,4,0	1/1:24,3:26:5.44:119,5,0	1/1:9,1:5:3.01:45,3,0	1/1:6,6:11:2.73:16,3,0	1/1:21,1:21:5.42:95,5,0	1/1:11,6:16:15.57:206,16,0	1/1:15,6:20:55.23:590,55,0	1/1:10,2:13:20.56:276,21,0	1/1:2,0:2:6.02:74,6,0
chr10	60104304	.	C	CTT	6601.88	PASS	AB=0.588;AC=50;AF=0.893;AN=56;BaseQRankSum=1.944;DP=692;FS=27.892;HRun=9;HaplotypeScore=115.4084;InbreedingCoeff=0.6155;MQ=77.12;MQ0=0;MQRankSum=-7.665;QD=10.03;ReadPosRankSum=3.038;VQSLOD=1.1895;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,0:28:62.11:212,62,0	1/1:0,10:11:26.58:378,27,0	0/0:17,0:18:39.02:0,39,469	0/0:15,0:16:38.81:0,39,385	1/1:4,0:25:23.48:148,23,0	1/1:1,1:24:52.79:217,53,0	1/1:2,0:18:37.43:128,37,0	1/1:10,27:37:77.88:1116,78,0	1/1:1,0:24:47.41:163,47,0	1/1:5,2:33:72.58:367,73,0	1/1:1,0:18:42.77:157,43,0	1/1:5,0:22:8.38:96,8,0	1/1:7,0:28:39.80:137,40,0	1/1:1,0:22:42.09:144,42,0	1/1:3,0:25:47.41:163,47,0	1/1:2,1:27:55.41:226,55,0	1/1:3,26:31:68.72:1025,69,0	1/1:2,1:22:42.94:183,43,0	0/1:8,1:23:19.80:123,0,20	1/1:1,0:31:72.59:259,73,0	0/1:6,0:24:12.93:103,0,13	1/1:6,0:28:20.86:139,21,0	1/1:3,0:33:71.23:242,71,0	1/1:1,1:16:37.94:166,38,0	1/1:3,0:27:59.89:205,60,0	1/1:6,0:30:60.73:222,61,0	1/1:5,0:31:30.19:172,30,0	1/1:7,0:20:32.44:112,32,0
chr10	60105778	.	A	AT	8426.37	PASS	AB=0.923;AC=25;AF=0.446;AN=56;BaseQRankSum=4.658;DP=681;FS=2.992;HRun=9;HaplotypeScore=103.0154;InbreedingCoeff=0.9222;MQ=69.20;MQ0=0;MQRankSum=-1.897;QD=24.57;ReadPosRankSum=1.628;VQSLOD=4.8415;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:83.89:0,84,721	0/1:1,1:12:14.28:14,0,28	0/0:13,0:13:30.46:0,30,260	0/0:3,0:3:9:0,9,78	0/0:31,0:31:77.96:0,78,677	0/0:33,0:33:89.97:0,90,781	0/0:19,0:19:53.99:0,54,469	0/0:0,0:26:47.32:0,47,140	0/0:23,0:23:68.99:0,69,599	1/1:4,33:37:96.23:1043,96,0	1/1:1,26:29:77.79:798,78,0	0/0:29,0:29:68.96:0,69,595	0/0:28,0:28:80.97:0,81,699	1/1:3,21:24:54.15:597,54,0	1/1:6,24:30:60.16:664,60,0	1/1:2,30:32:35.12:844,35,0	0/0:3,0:20:32.59:0,33,95	0/0:15,0:15:44.99:0,45,391	1/1:10,18:28:51.13:558,51,0	1/1:6,35:41:99:1068,99,0	1/1:5,12:17:33.09:363,33,0	0/0:29,0:29:74.98:0,75,651	0/0:23,0:23:62.97:0,63,543	0/0:13,0:13:38.99:0,39,339	1/1:3,16:19:42.11:465,42,0	1/1:5,26:31:72.18:787,72,0	1/1:5,28:33:81.22:893,81,0	1/1:0,10:10:30.08:332,30,0
chr10	60106154	.	TG	T	2488.70	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=13.094;DP=675;FS=0.000;HRun=2;HaplotypeScore=96.5754;InbreedingCoeff=0.9986;MQ=82.91;MQ0=0;MQRankSum=-12.630;QD=24.64;ReadPosRankSum=1.828;VQSLOD=3.3295;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,28:30:27.58:506,28,0	0/0:10,0:10:27.08:0,27,385	0/0:21,0:21:60.20:0,60,891	0/0:21,0:21:24.78:0,25,769	1/1:1,15:16:27.06:350,27,0	0/0:22,0:22:66.21:0,66,968	0/0:26,0:26:78.24:0,78,1129	0/0:36,0:36:99:0,102,1458	1/1:1,34:35:84.23:1057,84,0	0/0:23,0:23:63.20:0,63,923	0/0:12,0:12:33.11:0,33,493	0/0:27,0:27:81.27:0,81,1211	0/0:25,0:25:72.24:0,72,1079	0/0:31,0:31:93.31:0,93,1392	0/0:23,0:23:69.23:0,69,1013	0/0:29,0:29:87.29:0,87,1304	0/0:29,0:29:84.24:0,84,1207	1/1:1,19:20:57.18:736,57,0	0/0:18,0:18:54.14:0,54,749	0/0:29,0:29:81.26:0,81,1180	0/0:47,0:47:99:0,135,1952	0/0:20,0:20:54.17:0,54,787	0/0:19,0:19:51.12:0,51,720	0/0:19,0:19:57.19:0,57,853	0/0:21,0:21:63.21:0,63,944	0/0:25,0:25:66.21:0,66,970	0/0:26,0:25:78.25:0,78,1146	0/0:15,0:15:45.15:0,45,674
chr10	60106162	.	C	CA	1573.62	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=13.101;DP=644;FS=1.008;HRun=0;HaplotypeScore=96.9605;InbreedingCoeff=0.9989;MQ=82.05;MQ0=0;MQRankSum=-12.306;QD=21.27;ReadPosRankSum=2.174;VQSLOD=4.9558;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,17:19:37.28:373,37,0	0/0:10,0:10:30.10:0,30,419	0/0:20,0:20:57.14:0,57,710	0/0:18,0:18:38.98:0,39,484	1/1:0,13:13:24:213,24,0	0/0:23,0:23:66.20:0,66,904	0/0:29,0:29:84.24:0,84,1152	0/0:38,0:38:99:0,102,1410	1/1:0,25:26:78:707,78,0	0/0:25,0:25:62.73:0,63,847	0/0:10,0:10:27.09:0,27,378	0/0:27,0:27:81.27:0,81,1132	0/0:23,0:23:69.21:0,69,945	0/0:33,0:33:96.30:0,96,1324	0/0:23,0:23:69.23:0,69,963	0/0:32,0:32:96.32:0,96,1342	0/0:29,0:29:81.27:0,81,1133	1/1:1,15:16:45.06:441,45,0	0/0:16,0:16:45.15:0,45,629	0/0:27,0:27:78.24:0,78,1071	0/0:42,0:42:99:0,126,1762	0/0:18,0:18:51.08:0,51,685	0/0:18,0:18:54.14:0,54,703	0/0:21,0:21:60.19:0,60,819	0/0:22,0:22:66.22:0,66,922	0/0:27,0:27:81.26:0,81,1118	0/0:23,0:22:69.23:0,69,965	0/0:16,0:16:48.16:0,48,671
chr10	60106163	.	C	CTCAG	5031.68	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=13.987;DP=672;FS=1.452;HRun=0;HaplotypeScore=139.2167;InbreedingCoeff=0.9991;MQ=80.64;MQ0=0;MQRankSum=-13.729;QD=49.33;ReadPosRankSum=2.118;VQSLOD=5.8809;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:16,17:36:66.22:1419,66,0	0/0:10,0:10:30.10:0,30,627	0/0:20,0:20:54.17:0,54,1038	0/0:18,0:18:43.74:0,44,727	1/1:4,13:17:24.08:522,24,0	0/0:22,0:22:66.21:0,66,1341	0/0:29,0:29:84.29:0,84,1714	0/0:39,0:39:99:0,105,2109	1/1:6,24:31:87.30:1910,87,0	0/0:25,0:25:63.19:0,63,1189	0/0:11,0:11:30.09:0,30,590	0/0:27,0:27:81.28:0,81,1697	0/0:23,0:23:66.21:0,66,1345	0/0:32,0:32:96.31:0,96,1974	0/0:23,0:23:69.22:0,69,1386	0/0:32,0:32:96.33:0,96,2008	0/0:28,0:28:84.27:0,84,1714	1/1:3,15:18:54.17:1181,54,0	0/0:17,0:17:48.16:0,48,970	0/0:27,0:27:78.27:0,78,1616	0/0:42,0:42:99:0,126,2632	0/0:17,0:17:51.18:0,51,1060	0/0:19,0:19:54.19:0,54,1078	0/0:20,0:20:60.15:0,60,1173	0/0:22,0:22:66.23:0,66,1370	0/0:27,0:27:81.28:0,81,1677	0/0:23,0:22:69.24:0,69,1438	0/0:17,0:17:48.16:0,48,998
chr10	60106917	.	TAC	T	769.85	PASS	AB=0.796;AC=24;AF=0.462;AN=52;BaseQRankSum=0.380;DP=632;FS=0.000;HRun=0;HaplotypeScore=111.3354;InbreedingCoeff=0.6134;MQ=61.97;MQ0=17;MQRankSum=1.261;QD=2.69;ReadPosRankSum=1.833;VQSLOD=1.8935;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:22:19.40:0,19,182	0/0:10,0:10:2.50:0,2,9	./.	./.	0/0:21,0:21:16.72:0,17,165	0/0:22,0:21:14.99:0,15,137	0/0:29,0:29:2.95:0,3,24	0/0:26,0:25:2.68:0,3,11	0/0:23,0:23:27.18:0,27,254	1/1:26,0:26:3:26,3,0	1/1:7,6:13:6.02:64,6,0	0/0:16,0:26:3.46:0,3,25	0/0:19,0:19:14.98:0,15,138	1/1:21,8:30:6.05:46,6,0	1/1:16,10:26:21.03:207,21,0	0/1:12,5:17:1.46:160,0,1	1/1:14,0:21:2.84:14,3,0	0/0:21,0:21:15.41:0,15,150	1/1:15,2:17:5.99:54,6,0	1/1:6,4:10:5.97:52,6,0	0/1:53,15:67:5.30:113,0,5	0/0:18,0:17:9:0,9,82	0/0:12,0:12:12:0,12,117	0/0:43,0:44:34.42:0,34,327	1/1:13,0:14:11.25:59,11,0	1/1:19,0:26:14.20:70,14,0	1/1:9,2:12:8.86:78,9,0	1/1:4,0:4:0.47:1,0,0
chr10	60107965	.	CA	C	647.21	PASS	AB=0.959;AC=10;AF=0.179;AN=56;BaseQRankSum=-5.415;DP=539;FS=8.637;HRun=13;HaplotypeScore=115.4429;InbreedingCoeff=0.3251;MQ=41.51;MQ0=18;MQRankSum=1.897;QD=4.12;ReadPosRankSum=3.648;VQSLOD=1.3098;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:37,4:37:34.57:242,0,35	0/0:4,0:4:1.82:0,2,5	0/0:19,0:5:10.59:0,11,65	0/0:25,0:4:2.04:0,2,6	0/1:33,3:36:29.95:215,0,30	0/0:21,0:22:6.66:0,7,134	0/0:13,0:12:0.47:0,0,1	0/1:20,0:23:1.89:2,0,72	1/1:9,4:13:23.22:136,23,0	0/0:26,0:29:14.75:0,15,85	0/0:22,0:21:18.57:0,19,90	0/1:12,0:11:3.68:4,0,12	0/0:10,0:7:4.66:0,5,23	0/0:14,0:12:1.25:0,1,19	0/0:17,0:16:13.30:0,13,104	0/0:14,0:11:8.05:0,8,46	0/0:16,0:19:5.49:0,5,86	1/1:20,1:19:31.61:177,32,0	0/0:22,0:20:26.99:0,27,139	0/0:15,0:16:10.55:0,11,34	0/0:6,0:5:3.07:0,3,11	0/0:6,0:6:8.43:0,8,46	0/0:13,0:12:7.42:0,7,43	1/1:10,0:8:1.87:7,2,0	0/0:21,0:18:11.08:0,11,44	0/0:28,0:26:43.25:0,43,228	0/0:27,0:25:15.50:0,15,84	0/0:30,0:28:27.89:0,28,172
chr10	60107979	.	G	GA	1942.25	PASS	AB=1.000;AC=14;AF=0.250;AN=56;BaseQRankSum=-0.323;DP=576;FS=18.013;HRun=13;HaplotypeScore=100.0885;InbreedingCoeff=0.3587;MQ=55.19;MQ0=18;MQRankSum=-0.546;QD=7.62;ReadPosRankSum=1.538;VQSLOD=0.9532;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:40,2:38:52.46:597,52,0	0/0:3,0:3:6:0,6,51	0/0:31,0:10:12.52:0,13,95	0/1:44,0:17:3.10:3,0,116	1/1:36,2:38:48.95:674,49,0	0/0:24,0:23:21.31:0,21,172	0/0:16,0:15:23.99:0,24,206	0/0:25,0:25:39.32:0,39,360	1/1:12,1:13:3.98:133,4,0	0/1:28,0:28:46.13:46,0,174	0/1:23,0:21:30.15:30,0,166	0/1:12,0:11:1.77:2,0,81	0/0:9,0:6:4.85:0,5,49	0/0:13,0:13:14.96:0,15,124	0/0:18,0:17:29.79:0,30,227	0/1:12,0:9:12.20:12,0,85	0/0:22,0:20:21.03:0,21,238	1/1:25,3:27:66.41:599,66,0	0/0:22,0:20:14.98:0,15,242	0/1:15,0:15:8.67:9,0,123	0/0:6,0:5:5.72:0,6,53	0/0:12,0:12:25.77:0,26,228	0/0:14,0:13:7.24:0,7,82	0/0:10,0:8:6.19:0,6,54	0/0:19,0:18:12.50:0,12,89	0/0:27,0:25:12.75:0,13,203	0/0:26,0:24:8.32:0,8,200	0/0:23,0:22:13.04:0,13,119
chr10	60110848	.	GGAGA	G	10522.61	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=15.457;DP=824;FS=1.739;HRun=0;HaplotypeScore=149.2368;InbreedingCoeff=0.9998;MQ=82.04;MQ0=1;MQRankSum=-8.734;QD=33.94;ReadPosRankSum=3.814;VQSLOD=4.7383;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:45:99:0,120,2855	1/1:2,17:19:42.14:740,42,0	0/0:36,0:37:84.02:0,84,1907	0/0:33,0:33:72.25:0,72,1713	0/0:27,0:27:60.21:0,60,1523	1/1:2,23:25:54.18:954,54,0	1/1:6,25:31:60.20:1059,60,0	1/1:13,24:37:72.23:1238,72,0	0/0:17,0:17:45.15:0,45,1144	0/0:41,0:41:99:0,111,2745	0/0:15,0:15:36.12:0,36,884	1/1:2,30:32:74.98:1317,75,0	1/1:1,24:24:63.22:1113,63,0	0/0:28,0:28:84.29:0,84,2138	0/0:32,0:32:87.30:0,87,2234	0/0:33,0:33:87.27:0,87,2089	1/1:4,39:43:84.24:1451,84,0	0/0:28,0:28:78.27:0,78,1970	0/0:28,0:28:75.26:0,75,1885	0/0:21,0:21:51.18:0,51,1305	0/0:35,0:35:90.30:0,90,2223	1/1:3,28:31:48.16:848,48,0	1/1:9,19:28:27.09:477,27,0	1/1:3,36:39:75.26:1325,75,0	0/0:21,0:21:48.16:0,48,1232	0/0:31,0:31:75.25:0,75,1822	0/0:28,0:28:81.28:0,81,2078	0/0:14,0:14:36.12:0,36,911
chr10	60112182	.	T	TC	1405.83	PASS	AB=0.857;AC=10;AF=0.179;AN=56;BaseQRankSum=12.661;DP=667;FS=8.522;HRun=6;HaplotypeScore=138.6794;InbreedingCoeff=-0.2175;MQ=64.56;MQ0=0;MQRankSum=-11.834;QD=5.31;ReadPosRankSum=-3.541;VQSLOD=-0.7385;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:33,1:34:90.25:0,90,1084	0/0:14,0:14:39.12:0,39,479	0/0:11,0:10:23.89:0,24,248	0/0:14,0:12:23.83:0,24,237	0/0:22,0:22:63.17:0,63,760	0/0:18,0:18:51.06:0,51,618	0/0:31,0:31:90.25:0,90,1084	0/0:20,0:20:54.16:0,54,658	0/0:28,0:28:84.26:0,84,1039	0/1:21,7:29:99:254,0,615	0/0:11,0:11:24.07:0,24,295	0/0:31,0:31:93.29:0,93,1149	0/0:19,0:19:51.14:0,51,617	0/1:22,4:27:99:122,0,544	0/1:21,10:31:99:375,0,476	0/1:26,4:30:99:130,0,767	0/0:33,0:32:93.29:0,93,1148	0/0:26,0:26:72.23:0,72,892	0/1:11,0:11:30.94:31,0,233	0/1:17,3:20:80.76:81,0,499	0/1:32,4:36:18.78:19,0,842	0/0:28,0:28:81.20:0,81,971	0/0:19,0:19:54.17:0,54,663	0/0:33,0:33:96.28:0,96,1174	0/1:24,3:27:99:129,0,592	0/1:18,5:23:99:172,0,493	0/1:24,7:31:99:239,0,696	0/0:9,0:9:23.80:0,24,295
chr10	60112189	.	T	TG	2184.31	PASS	AB=0.793;AC=10;AF=0.179;AN=56;BaseQRankSum=13.748;DP=676;FS=7.517;HRun=0;HaplotypeScore=137.6909;InbreedingCoeff=-0.2185;MQ=62.91;MQ0=2;MQRankSum=-12.123;QD=8.18;ReadPosRankSum=-1.187;VQSLOD=3.2503;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:96.32:0,96,1340	0/0:13,0:13:36.12:0,36,502	0/0:14,0:11:23.26:0,23,253	0/0:20,0:16:17.86:0,18,409	0/0:23,0:23:69.23:0,69,963	0/0:18,0:18:49.32:0,49,710	0/0:30,0:30:85.51:0,86,1159	0/0:18,0:17:45.13:0,45,599	0/0:28,0:28:84.28:0,84,1168	0/1:17,9:26:99:351,0,631	0/0:10,1:11:24.08:0,24,335	0/0:30,0:30:90.30:0,90,1257	0/0:18,0:18:51.17:0,51,713	0/1:22,6:28:99:189,0,673	0/1:20,13:34:99:553,0,539	0/1:23,7:30:99:236,0,856	0/0:32,0:31:96.30:0,96,1317	0/0:28,0:28:84.25:0,84,1143	0/1:9,2:12:99:112,0,299	0/1:17,3:22:99:136,0,528	0/1:29,5:34:17.80:18,0,871	0/0:30,0:30:90.29:0,90,1236	0/0:19,0:19:57.19:0,57,797	0/0:35,0:35:99:0,102,1424	0/1:20,8:28:99:209,0,642	0/1:16,6:22:99:265,0,547	0/1:23,7:31:99:262,0,817	0/0:6,0:6:14.77:0,15,205
chr10	60112196	.	CT	C	1515.47	PASS	AB=0.815;AC=9;AF=0.161;AN=56;BaseQRankSum=14.321;DP=713;FS=3.973;HRun=2;HaplotypeScore=150.0156;InbreedingCoeff=-0.1988;MQ=59.86;MQ0=2;MQRankSum=-12.409;QD=6.04;ReadPosRankSum=2.095;VQSLOD=0.9669;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,105,1427	0/0:10,0:10:27.09:0,27,394	0/0:14,0:11:32.50:0,33,402	0/0:23,0:17:30.24:0,30,480	0/0:24,0:24:69.16:0,69,967	0/0:20,0:20:54.59:0,55,823	0/0:28,0:28:84.25:0,84,1213	0/0:19,0:18:54.16:0,54,739	0/0:28,0:28:84.26:0,84,1209	0/1:23,9:31:99:248,0,704	0/0:10,1:11:21.07:0,21,312	0/0:37,0:37:99:0,111,1608	0/0:18,0:18:51.17:0,51,763	0/1:22,6:28:99:119,0,693	0/1:27,12:39:99:375,0,539	0/1:24,7:31:99:167,0,809	0/0:35,0:34:99:0,99,1410	0/0:28,0:28:81.21:0,81,1146	0/1:12,2:14:61.14:61,0,258	0/1:23,3:26:85.24:85,0,585	0/0:36,3:39:7.09:0,7,888	0/0:33,0:33:96.29:0,96,1379	0/0:20,0:20:51.09:0,51,698	0/0:34,0:34:99:0,102,1480	0/1:23,8:31:99:235,0,581	0/1:15,6:21:99:190,0,521	0/1:22,7:29:99:177,0,774	0/0:4,0:4:9.03:0,9,135
chr10	60112204	.	CCATG	C	3207.43	PASS	AB=0.863;AC=11;AF=0.196;AN=56;BaseQRankSum=14.103;DP=729;FS=4.854;HRun=0;HaplotypeScore=190.7353;InbreedingCoeff=-0.2362;MQ=61.19;MQ0=2;MQRankSum=-11.256;QD=10.15;ReadPosRankSum=1.572;VQSLOD=2.8742;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,111,3018	0/0:9,0:9:21.07:0,21,576	0/1:20,0:17:2.18:2,0,937	0/0:25,0:19:27.67:0,28,886	0/0:22,0:22:66.23:0,66,1773	0/0:19,0:19:53.87:0,54,1436	0/0:27,0:27:72.25:0,72,2003	0/0:23,0:22:60.21:0,60,1672	0/0:27,0:27:78.27:0,78,2117	0/1:28,8:35:99:631,0,1182	0/0:8,5:13:21.07:0,21,570	0/0:41,0:41:99:0,123,3283	0/0:21,0:21:54.19:0,54,1436	0/1:28,0:28:99:196,0,1082	0/1:30,11:41:99:567,0,799	0/1:27,6:33:99:353,0,1317	0/0:37,0:36:99:0,111,2992	0/0:26,0:26:78.20:0,78,2038	0/1:9,4:13:99:252,0,307	0/1:24,4:28:99:202,0,1126	0/1:31,8:39:12.68:13,0,1325	0/0:29,0:29:87.30:0,87,2374	0/0:18,0:18:51.17:0,51,1324	0/0:33,0:33:99:0,99,2725	0/1:21,6:27:99:413,0,876	0/1:19,4:23:99:403,0,888	0/1:25,3:28:99:322,0,1319	0/0:3,0:3:9.03:0,9,202
chr10	60112222	.	C	CT	2567.11	PASS	AB=0.795;AC=11;AF=0.204;AN=54;BaseQRankSum=6.374;DP=704;FS=29.493;HRun=1;HaplotypeScore=158.9561;InbreedingCoeff=-0.2567;MQ=67.21;MQ0=2;MQRankSum=-9.560;QD=9.01;ReadPosRankSum=-0.496;VQSLOD=-0.5454;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,129,1655	0/0:6,0:6:15.05:0,15,195	0/0:21,0:20:45.32:0,45,623	0/0:25,0:19:31.38:0,31,473	0/0:25,0:25:72.11:0,72,870	0/0:20,0:20:57.08:0,57,685	0/0:31,0:31:81.25:0,81,1037	0/0:28,0:28:69.12:0,69,830	0/0:31,0:31:90.26:0,90,1138	0/1:19,9:27:99:312,0,526	0/1:13,2:15:53.81:174,0,54	0/0:38,0:38:99:0,111,1412	0/0:19,0:19:48.13:0,48,606	0/1:18,14:32:99:265,0,541	0/1:33,7:40:99:195,0,779	0/1:18,12:30:99:418,0,446	0/0:34,0:33:99:0,99,1269	0/0:22,0:22:66.17:0,66,823	0/1:12,1:13:37.56:38,0,281	0/1:15,10:25:99:357,0,297	0/1:20,9:29:99:200,0,229	0/0:28,0:28:81.25:0,81,1036	0/0:16,0:16:42.10:0,42,514	0/0:29,0:29:78.24:0,78,997	0/1:19,6:25:99:255,0,402	0/1:17,4:21:99:181,0,444	0/1:20,7:27:99:320,0,379	./.
chr10	60114194	.	TGA	T	1871.18	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=6.419;DP=738;FS=7.783;HRun=0;HaplotypeScore=92.7999;InbreedingCoeff=0.9978;MQ=84.32;MQ0=1;MQRankSum=0.083;QD=35.98;ReadPosRankSum=-1.344;VQSLOD=5.3563;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,160,3031	1/1:0,9:9:24.08:367,24,0	0/0:25,0:25:75.14:0,75,1215	0/0:26,0:26:73.42:0,73,1284	0/0:27,0:27:81.24:0,81,1527	0/0:20,0:20:57.20:0,57,1087	0/0:31,0:31:90.29:0,90,1675	1/1:0,17:17:51.15:736,51,0	0/0:27,0:27:78.27:0,78,1503	0/0:24,0:24:66.22:0,66,1191	0/0:14,0:14:42.14:0,42,811	0/0:36,0:36:99:0,108,2067	0/0:32,0:32:93.30:0,93,1761	0/0:38,0:38:99:0,114,2197	0/0:26,0:26:75.26:0,75,1449	0/0:24,0:24:72.25:0,72,1370	1/1:1,25:25:60.20:911,60,0	0/0:34,0:34:99:0,99,1912	0/0:20,0:20:60.19:0,60,1094	0/0:23,0:23:69.24:0,69,1332	0/0:44,0:44:99:0,132,2452	0/0:24,0:24:72.25:0,72,1378	0/0:12,0:12:36.11:0,36,662	0/0:35,0:35:99:0,105,1967	0/0:21,0:21:60.19:0,60,1127	0/0:32,0:32:96.33:0,96,1784	0/0:29,0:29:87.27:0,87,1603	0/0:7,0:7:21.07:0,21,406
chr10	60116088	.	CTGTG	C	2438.88	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=0.826;DP=560;FS=4.620;HRun=0;HaplotypeScore=125.9609;InbreedingCoeff=0.9719;MQ=84.99;MQ0=0;MQRankSum=-4.598;QD=48.78;ReadPosRankSum=0.378;VQSLOD=4.1434;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:51.18:0,51,1396	1/1:0,10:10:27.09:522,27,0	0/0:23,0:23:66.21:0,66,1668	0/0:19,0:19:42.11:0,42,1079	0/0:7,0:7:18.06:0,18,493	0/0:15,0:15:45.14:0,45,1145	0/0:25,0:25:72.25:0,72,1975	1/1:0,17:17:51.16:955,51,0	0/0:23,0:23:69.24:0,69,1888	0/0:21,0:21:60.21:0,60,1642	0/0:5,0:5:9.03:0,9,246	0/0:37,0:37:99:0,105,2833	0/0:16,0:16:48.16:0,48,1313	0/0:27,0:27:75.26:0,75,2037	0/0:19,0:19:48.16:0,48,1313	0/0:19,0:19:48.16:0,48,1284	1/1:2,21:23:57.20:1105,57,0	0/0:26,0:26:78.24:0,78,2076	0/0:28,0:28:77.97:0,78,2080	0/0:6,0:6:18.06:0,18,492	0/0:57,0:57:99:0,166,4498	0/0:10,0:10:30.10:0,30,812	0/0:8,0:8:21.06:0,21,518	0/0:33,0:33:90.29:0,90,2333	0/0:14,0:14:39.13:0,39,1052	0/0:29,0:29:81.28:0,81,2193	0/0:13,0:13:36.09:0,36,925	0/0:11,0:11:33.11:0,33,903
chr10	60116234	.	GCGCGCGCA	G	2718.81	PASS	AB=0.973;AC=26;AF=0.481;AN=54;BaseQRankSum=3.283;DP=711;FS=66.658;HRun=0;HaplotypeScore=301.5022;InbreedingCoeff=-0.3946;MQ=40.53;MQ0=13;MQRankSum=-4.129;QD=4.61;ReadPosRankSum=-0.523;VQSLOD=0.0814;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:5.04:0,5,891	0/1:6,0:6:28.80:29,0,134	0/0:40,0:14:24.39:0,24,519	0/1:39,0:10:38.21:38,0,331	0/0:13,0:13:9.03:0,9,315	0/1:18,0:18:12.95:13,0,23	0/1:46,0:45:8.14:8,0,2417	0/1:22,0:20:75.81:76,0,1067	0/1:27,0:27:26.15:26,0,413	0/1:31,2:31:99:332,0,504	./.	0/1:42,0:41:3.26:3,0,1198	0/1:28,0:28:99:113,0,642	0/1:25,1:26:13.76:29,0,14	1/1:25,1:26:15.76:141,16,0	1/1:14,0:15:13.16:111,13,0	0/1:23,0:23:99:182,0,883	0/1:21,0:21:72.69:73,0,1082	0/1:22,0:21:46.96:388,0,47	0/1:11,4:15:0.23:1,0,0	0/1:19,0:16:0:0,0,0	0/0:18,0:18:0.11:0,0,489	0/1:14,0:14:39.41:39,0,263	0/1:36,0:36:0.54:1,0,720	1/1:34,5:39:6.30:40,6,0	0/1:32,2:33:99:584,0,170	0/1:18,1:19:77.10:245,0,77	0/1:16,2:18:69.31:393,0,69
chr10	60116236	.	GCGCGCA	G	3217.62	PASS	AB=0.995;AC=26;AF=0.481;AN=54;BaseQRankSum=3.977;DP=699;FS=47.468;HRun=0;HaplotypeScore=286.1983;InbreedingCoeff=-0.5608;MQ=39.16;MQ0=13;MQRankSum=-3.792;QD=5.42;ReadPosRankSum=1.698;VQSLOD=1.0191;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:36,0:36:52.57:53,0,729	0/1:7,0:7:28.78:29,0,164	0/0:39,0:12:17.16:0,17,339	0/1:40,0:8:45.24:45,0,270	0/0:8,5:13:12.04:0,12,301	0/1:19,0:19:56.56:130,0,57	0/1:42,1:42:99:143,0,1843	0/1:20,0:18:24.46:24,0,925	0/1:25,0:25:99:170,0,306	0/1:33,0:31:99:248,0,250	./.	0/1:38,2:39:99:159,0,845	0/1:30,0:30:99:277,0,561	0/1:26,0:26:3.34:42,0,3	1/1:25,0:25:11.04:70,11,0	1/1:14,0:14:4.71:61,5,0	0/1:21,1:22:99:134,0,684	0/1:22,0:22:99:265,0,827	0/1:21,0:20:35.25:294,0,35	0/1:15,0:15:0.17:1,0,0	0/1:20,0:17:0:0,0,0	0/1:18,0:18:23.83:24,0,380	0/1:13,0:13:82.06:82,0,194	0/1:33,0:33:44.96:45,0,561	0/0:38,1:39:3.52:0,4,13	0/1:34,0:33:99:490,0,150	0/1:21,0:21:54.10:247,0,54	0/1:17,0:17:91.41:331,0,91
chr10	60116238	.	GCGCA	G	2655.87	PASS	AB=0.943;AC=29;AF=0.537;AN=54;BaseQRankSum=7.503;DP=680;FS=46.639;HRun=0;HaplotypeScore=273.2173;InbreedingCoeff=-0.3164;MQ=38.78;MQ0=14;MQRankSum=-6.768;QD=4.72;ReadPosRankSum=1.581;VQSLOD=0.8746;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:33,1:34:10.21:10,0,544	0/1:5,2:7:76.28:76,0,118	0/0:40,0:10:15.48:0,15,220	0/1:39,0:5:24.80:25,0,161	0/0:13,0:13:12.04:0,12,214	0/1:16,1:17:37.83:42,0,38	0/1:44,0:43:26.94:27,0,1393	0/1:14,3:15:31.91:32,0,663	0/1:24,0:24:86.45:86,0,223	0/1:29,1:28:52.21:310,0,52	./.	0/1:40,0:39:81.68:82,0,646	0/1:30,0:30:99:134,0,389	0/1:25,2:27:0.38:33,0,0	1/1:22,1:23:10.34:60,10,0	1/1:13,0:13:3.52:90,4,0	0/1:19,3:22:99:160,0,514	0/1:21,0:21:93.44:93,0,593	1/1:20,1:20:8.76:383,9,0	1/1:14,1:15:0.37:1,0,0	0/1:16,4:17:0:0,0,0	0/0:18,0:18:0.02:0,0,267	0/1:11,0:11:15.07:15,0,150	0/0:33,0:33:3.88:0,4,437	1/1:34,5:39:0.14:13,0,0	1/1:26,6:31:10.13:613,10,0	0/1:18,3:21:3.68:268,0,4	0/1:16,0:16:40.05:249,0,40
chr10	60116240	.	GCA	G	2333.18	PASS	AB=0.973;AC=24;AF=0.462;AN=52;BaseQRankSum=10.951;DP=682;FS=50.140;HRun=0;HaplotypeScore=263.9380;InbreedingCoeff=0.2949;MQ=39.79;MQ0=15;MQRankSum=-9.996;QD=5.83;ReadPosRankSum=4.888;VQSLOD=1.5630;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:33.80:0,34,439	0/1:7,0:7:33.66:34,0,74	0/0:40,0:8:15.43:0,15,156	0/1:40,0:5:17.91:18,0,82	0/0:15,0:15:17.98:0,18,170	0/0:17,0:17:7.35:0,7,35	0/0:45,0:44:68.18:0,68,1029	0/0:18,0:16:2.64:0,3,441	0/1:23,0:23:2.55:3,0,160	1/1:26,3:27:66.51:513,67,0	./.	0/1:40,0:39:37.24:37,0,448	0/1:30,0:30:33.52:34,0,286	1/1:26,1:27:1.07:28,1,0	1/1:19,2:21:1.08:4,1,0	1/1:10,3:13:11.38:117,11,0	0/1:21,0:21:51.51:52,0,330	0/1:18,0:18:41.29:41,0,359	1/1:8,12:19:46.16:438,46,0	0/0:10,5:15:1.72:0,2,4	./.	0/0:18,0:18:17.06:0,17,186	0/0:11,0:11:8.18:0,8,127	0/0:33,0:33:22.20:0,22,322	0/1:31,12:43:1.45:33,0,1	1/1:25,7:31:72.65:618,73,0	1/1:17,3:20:35.75:297,36,0	1/1:13,3:16:21.31:240,21,0
chr10	60116241	.	CAT	C	2056.82	PASS	AB=0.835;AC=23;AF=0.426;AN=54;BaseQRankSum=8.879;DP=682;FS=26.866;HRun=0;HaplotypeScore=263.1591;InbreedingCoeff=-0.0977;MQ=39.72;MQ0=15;MQRankSum=-7.628;QD=4.56;ReadPosRankSum=3.281;VQSLOD=1.4034;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,5:37:15.95:0,16,589	0/1:7,0:7:18.57:19,0,134	0/0:41,0:8:15.91:0,16,246	0/1:39,0:5:7.37:7,0,79	0/0:14,1:15:18.06:0,18,296	0/1:9,8:17:37.87:40,0,38	0/1:41,4:44:9.37:9,0,1235	0/0:17,2:17:16.26:0,16,557	0/1:19,4:23:57.04:57,0,205	1/1:13,15:26:46.36:530,46,0	./.	0/1:26,14:39:99:145,0,579	0/1:23,7:30:99:140,0,370	1/1:21,6:27:0.42:18,0,0	0/0:14,7:21:0.66:0,1,10	1/1:11,2:13:4.29:50,4,0	0/1:22,0:22:15.87:16,0,522	0/1:13,5:18:99:165,0,470	1/1:18,2:19:11.18:216,11,0	0/0:14,1:15:1.72:0,2,4	0/0:17,2:16:0:0,0,0	0/0:12,5:17:1.05:0,1,240	0/1:6,4:10:10.95:11,0,107	0/0:26,7:33:3.97:0,4,391	0/1:38,5:43:1.84:15,0,2	0/1:25,7:31:7.09:353,0,7	1/1:16,4:20:26.68:271,27,0	0/1:8,8:16:14.92:149,0,15
chr10	60116248	.	GTGTA	G	788.60	PASS	AB=0.987;AC=24;AF=0.429;AN=56;BaseQRankSum=7.669;DP=788;FS=4.914;HRun=0;HaplotypeScore=332.9222;InbreedingCoeff=-0.2897;MQ=38.91;MQ0=15;MQRankSum=-6.307;QD=1.34;ReadPosRankSum=-0.519;VQSLOD=1.4985;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:27.01:0,27,1098	0/0:9,0:9:0.96:0,1,243	0/0:44,0:9:7.87:0,8,209	0/1:46,0:6:0.93:1,0,62	0/0:15,0:15:21.06:0,21,510	0/1:22,0:22:25.28:25,0,89	0/0:45,0:44:33.84:0,34,1613	0/1:19,0:17:13.17:13,0,578	0/1:24,0:24:72.42:72,0,396	0/1:34,1:32:62.23:62,0,205	0/1:19,1:20:0:0,0,0	0/1:40,0:39:79.41:79,0,739	0/1:28,0:28:99:127,0,534	0/1:33,4:37:2.72:56,0,3	1/1:30,0:30:4.55:22,5,0	1/1:20,0:20:5:51,5,0	0/1:21,0:21:24.05:24,0,701	0/1:22,0:22:12.36:12,0,893	0/1:32,0:32:10.83:11,0,571	0/0:20,0:20:1.84:0,2,35	0/0:21,0:18:0:0,0,0	0/1:18,0:18:6.90:7,0,337	0/1:11,0:11:11.92:12,0,190	0/1:36,0:36:0.68:1,0,488	1/1:51,1:52:5.05:32,5,0	0/1:38,0:38:99:153,0,248	0/1:21,0:21:61.66:62,0,87	0/1:17,1:18:45.17:111,0,45
chr10	60116250	.	GTA	G	1370.84	PASS	AB=0.952;AC=26;AF=0.464;AN=56;BaseQRankSum=8.843;DP=794;FS=23.857;HRun=0;HaplotypeScore=319.0359;InbreedingCoeff=-0.3058;MQ=38.89;MQ0=17;MQRankSum=-6.129;QD=2.11;ReadPosRankSum=0.243;VQSLOD=0.5547;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:42,1:43:26.96:0,27,751	0/1:8,1:9:4.30:4,0,148	0/0:46,0:9:7.82:0,8,151	0/1:50,0:5:1.32:1,0,44	0/0:15,0:15:20.96:0,21,361	0/1:17,5:22:48:51,0,48	0/1:43,5:47:8.04:8,0,1030	0/1:15,2:15:16.79:17,0,361	0/1:24,0:24:62.16:62,0,255	0/1:36,0:33:45.21:194,0,45	0/1:18,2:20:0:0,0,0	0/1:39,0:39:99:123,0,470	0/1:27,0:27:99:161,0,323	0/1:36,0:36:1.46:19,0,1	1/1:31,0:31:4.26:21,4,0	0/1:20,0:20:6.16:41,0,6	0/1:20,1:21:20.21:20,0,445	0/1:21,1:22:99:156,0,587	0/1:31,0:31:65.81:66,0,342	0/0:20,0:20:2.99:0,3,20	0/0:20,0:17:0:0,0,0	0/1:17,1:18:6.91:7,0,205	0/1:10,2:12:11.93:12,0,116	0/1:35,1:36:0.48:0,0,318	1/1:52,0:52:1.97:33,2,0	0/1:35,3:38:32.08:252,0,32	1/1:20,1:21:15.61:159,16,0	0/1:18,0:18:0.87:107,0,1
chr10	60116263	.	TGTGCGCGC	T	2333.52	PASS	AB=0.978;AC=16;AF=0.296;AN=54;BaseQRankSum=11.501;DP=791;FS=19.906;HRun=0;HaplotypeScore=363.3956;InbreedingCoeff=0.3803;MQ=38.49;MQ0=18;MQRankSum=-11.156;QD=7.03;ReadPosRankSum=3.095;VQSLOD=0.5421;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:57.03:0,57,2443	0/0:9,0:9:18.53:0,19,644	0/0:44,0:9:17.18:0,17,292	0/0:44,0:3:5.89:0,6,133	0/0:13,0:13:20.85:0,21,928	0/0:23,0:23:18.78:0,19,582	0/0:55,0:54:99:0,108,3624	0/0:19,0:18:47.48:0,47,888	0/0:22,0:22:31.52:0,32,1260	0/1:39,1:38:99:685,0,157	0/1:21,1:22:0.03:0,0,0	0/0:38,0:38:52.95:0,53,1576	0/0:24,0:25:44.81:0,45,1204	1/1:36,1:37:0.25:33,0,0	1/1:32,0:32:6.24:58,6,0	1/1:18,2:20:16.30:260,16,0	0/0:22,0:22:54.30:0,54,1474	0/0:27,0:27:72.44:0,72,2295	0/1:23,0:23:56.69:300,0,57	1/1:22,0:22:3.62:10,4,0	./.	0/0:16,0:16:21.07:0,21,619	0/0:11,0:11:15.05:0,15,509	0/0:34,0:34:26.78:0,27,969	1/1:52,3:55:1.61:72,2,0	0/1:33,1:34:99:431,0,179	0/1:24,1:25:99:233,0,110	0/1:21,0:20:3.70:406,0,4
chr10	60116265	.	T	TGC	5172.22	PASS	AB=0.897;AC=21;AF=0.389;AN=54;BaseQRankSum=-7.273;DP=775;FS=4.655;HRun=0;HaplotypeScore=313.9419;InbreedingCoeff=0.5758;MQ=38.98;MQ0=18;MQRankSum=4.183;QD=16.42;ReadPosRankSum=-0.595;VQSLOD=4.2106;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:57.11:0,57,715	0/1:5,4:9:1.36:215,0,1	0/0:39,0:8:5.20:0,5,77	0/0:43,0:2:2.88:0,3,15	0/0:13,0:13:21.07:0,21,280	1/1:15,7:23:18.63:231,19,0	1/1:28,27:55:81.84:1568,82,0	1/1:15,3:17:29.71:333,30,0	0/0:21,0:21:33.29:0,33,383	0/1:34,0:37:17.10:17,0,267	0/0:19,0:22:0:0,0,0	1/1:22,16:38:51.79:770,52,0	1/1:14,11:25:28.35:517,28,0	0/0:25,0:37:5.06:0,5,30	0/0:19,0:32:0.14:0,0,2	0/0:9,0:20:10.32:0,10,50	1/1:10,13:23:44.57:581,45,0	0/0:27,0:27:57.38:0,57,682	0/0:16,0:18:2.76:0,3,97	0/0:19,0:22:3.73:0,4,15	./.	1/1:10,6:16:21.03:307,21,0	1/1:6,5:11:14.90:190,15,0	1/1:23,14:37:29.36:432,29,0	0/0:40,0:54:3.74:0,4,12	0/0:26,0:30:0.43:0,0,227	0/0:14,0:24:7.07:0,7,113	0/1:19,0:20:10.80:11,0,121
chr10	60116266	.	GCGCGCA	G	4474.71	PASS	AB=0.898;AC=20;AF=0.370;AN=54;BaseQRankSum=12.915;DP=752;FS=26.088;HRun=0;HaplotypeScore=333.1833;InbreedingCoeff=0.8204;MQ=39.46;MQ0=18;MQRankSum=-12.438;QD=14.82;ReadPosRankSum=2.190;VQSLOD=2.9434;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:59.87:0,60,2171	0/0:9,0:9:21.03:0,21,655	0/0:37,0:8:18.03:0,18,264	0/0:44,0:3:6.02:0,6,154	0/0:13,0:13:20.84:0,21,782	0/0:23,0:23:12.61:0,13,597	0/0:54,1:55:99:0,112,3382	0/0:16,0:15:27.46:0,27,910	0/0:21,0:21:27.34:0,27,1202	1/1:26,12:36:31.80:1458,32,0	0/1:19,3:22:0.03:0,0,0	0/0:37,0:37:46.74:0,47,1306	0/0:26,0:26:44.13:0,44,1100	1/1:36,1:36:2.81:98,3,0	1/1:27,4:31:7.89:102,8,0	1/1:18,1:19:17.44:288,17,0	0/0:23,0:23:56.20:0,56,1370	0/0:26,1:27:44.96:0,45,2055	1/1:8,2:10:21.94:429,22,0	1/1:19,1:20:4.73:40,5,0	./.	0/0:16,0:16:21.07:0,21,528	0/0:11,0:11:15.05:0,15,447	0/0:38,0:38:38.81:0,39,1175	1/1:48,4:52:6.96:81,7,0	1/1:28,2:30:31.75:890,32,0	0/1:20,2:22:2.76:484,0,3	1/1:20,1:20:26.69:604,27,0
chr10	60116268	.	GCGCA	G	2521.63	PASS	AB=0.981;AC=18;AF=0.333;AN=54;BaseQRankSum=13.336;DP=744;FS=26.625;HRun=0;HaplotypeScore=322.9298;InbreedingCoeff=0.6595;MQ=39.95;MQ0=17;MQRankSum=-12.431;QD=8.49;ReadPosRankSum=1.929;VQSLOD=1.0806;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:60.04:0,60,1659	0/0:9,0:9:21.07:0,21,476	0/0:34,0:7:13.94:0,14,138	0/0:42,0:4:9:0,9,152	0/0:11,0:11:20.97:0,21,586	0/0:23,0:23:16.34:0,16,432	0/0:54,0:54:99:0,112,2431	0/0:17,0:16:34.43:0,34,782	0/0:22,0:22:39.90:0,40,960	0/1:38,0:36:1.71:677,0,2	0/1:22,0:22:0.02:0,0,0	0/0:39,0:39:50.08:0,50,992	0/0:26,0:26:47.58:0,48,832	1/1:33,1:33:5.21:130,5,0	1/1:29,1:30:5.97:60,6,0	1/1:18,1:19:17.18:228,17,0	0/0:23,0:23:52.30:0,52,1002	0/0:27,0:27:60.98:0,61,1571	1/1:10,0:10:23.90:197,24,0	1/1:20,0:20:1.71:4,2,0	./.	0/0:18,0:18:24.08:0,24,417	0/0:11,0:11:15.05:0,15,322	0/0:39,0:39:41.48:0,41,901	1/1:49,2:51:8.14:57,8,0	0/1:29,1:30:20.82:613,0,21	0/1:21,1:22:11.26:312,0,11	1/1:21,0:20:17.33:419,17,0
chr10	60116270	.	GCA	G	2035.56	PASS	AB=0.903;AC=22;AF=0.407;AN=54;BaseQRankSum=13.062;DP=734;FS=23.519;HRun=0;HaplotypeScore=306.7186;InbreedingCoeff=0.7560;MQ=40.38;MQ0=19;MQRankSum=-12.254;QD=6.34;ReadPosRankSum=1.363;VQSLOD=1.9912;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,1:41:60.04:0,60,1155	0/0:9,0:9:21.07:0,21,297	0/0:34,0:7:11.18:0,11,122	0/0:40,0:4:9:0,9,109	0/0:12,0:12:24.07:0,24,449	0/0:22,0:22:23.22:0,23,286	0/0:53,0:53:91.26:0,91,1444	0/1:17,0:16:1.70:2,0,423	0/0:22,0:22:33.60:0,34,682	1/1:30,4:33:81.98:732,82,0	0/1:14,7:21:0.01:0,0,0	0/0:40,0:40:48.07:0,48,575	0/0:27,0:27:47.67:0,48,495	1/1:33,1:33:4.10:53,4,0	1/1:27,3:30:4.93:38,5,0	1/1:19,0:19:14.24:104,14,0	0/0:22,0:22:50.98:0,51,615	0/0:30,0:29:54.93:0,55,1083	1/1:9,0:9:18.87:157,19,0	0/1:16,3:19:0.45:2,0,0	./.	0/1:18,0:18:5.18:5,0,193	0/0:11,0:11:15.04:0,15,189	0/0:39,0:39:41.63:0,42,556	1/1:45,5:50:5.31:69,5,0	1/1:21,6:27:35.42:503,35,0	1/1:21,1:22:25.95:276,26,0	1/1:18,3:20:27.57:283,28,0
chr10	60116271	.	CAT	C	1372.65	PASS	AB=0.964;AC=17;AF=0.315;AN=54;BaseQRankSum=10.580;DP=728;FS=35.795;HRun=0;HaplotypeScore=312.3002;InbreedingCoeff=0.2117;MQ=40.46;MQ0=20;MQRankSum=-10.971;QD=4.17;ReadPosRankSum=-0.039;VQSLOD=1.7576;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:60.21:0,60,1216	0/0:8,0:8:21.05:0,21,297	0/0:34,0:6:5.57:0,6,123	0/0:38,0:4:9.03:0,9,154	0/0:12,0:12:24.08:0,24,475	0/0:17,1:20:23.31:0,23,332	0/0:51,0:51:99:0,112,1332	0/1:17,0:16:53.31:53,0,486	0/0:22,0:22:23.73:0,24,751	0/1:36,1:36:51.45:530,0,51	0/1:22,0:22:0.15:0,0,0	0/0:38,0:39:36.04:0,36,565	0/0:26,0:26:24.45:0,24,482	0/1:35,1:35:4.78:15,0,5	1/1:28,3:31:3.65:17,4,0	0/1:19,0:19:5.63:34,0,6	0/0:20,0:20:51:0,51,646	0/0:29,0:28:63.72:0,64,1166	0/1:7,1:8:11.27:81,0,11	1/1:16,4:20:1.59:16,2,0	./.	0/1:16,0:16:52.73:53,0,226	0/0:10,0:10:15.03:0,15,208	0/0:37,0:37:41.63:0,42,609	1/1:49,4:53:6.37:37,6,0	0/1:21,3:26:25.98:329,0,26	0/1:23,0:23:6.01:156,0,6	1/1:20,1:20:4.03:206,4,0
chr10	60116273	.	TGC	T	947.97	PASS	AB=0.955;AC=14;AF=0.259;AN=54;BaseQRankSum=12.104;DP=736;FS=35.829;HRun=0;HaplotypeScore=319.2967;InbreedingCoeff=0.4638;MQ=40.71;MQ0=19;MQRankSum=-11.193;QD=3.35;ReadPosRankSum=1.630;VQSLOD=1.5287;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:39,1:40:63.05:0,63,1215	0/0:8,0:8:21.07:0,21,403	0/0:32,0:6:15.03:0,15,154	0/0:36,0:4:9.03:0,9,173	0/0:12,0:12:24.08:0,24,462	0/0:21,0:21:25.87:0,26,444	0/0:51,0:51:99:0,118,2212	0/0:17,0:16:35.02:0,35,643	0/0:21,0:21:21.09:0,21,681	0/1:37,1:37:62.90:310,0,63	0/1:20,2:23:0.15:0,0,0	0/0:39,0:39:4.41:0,4,927	0/0:28,0:28:13.06:0,13,793	0/1:34,2:35:4.43:29,0,4	1/1:30,2:32:4.55:22,5,0	1/1:19,0:19:11.55:72,12,0	0/0:20,0:20:51.04:0,51,964	0/0:29,0:28:11.84:0,12,1073	0/1:8,0:8:0.09:51,0,0	0/0:20,2:22:2.64:0,3,12	./.	0/0:16,0:16:22.11:0,22,359	0/0:10,0:10:15.04:0,15,286	0/0:38,0:38:44.67:0,45,866	1/1:51,3:54:6.85:41,7,0	0/1:27,1:28:29.31:237,0,29	0/1:21,2:23:7.36:134,0,7	1/1:21,1:21:12.40:210,12,0
chr10	60116302	.	G	GTA	1125.63	PASS	AB=0.875;AC=13;AF=0.232;AN=56;BaseQRankSum=7.673;DP=802;FS=40.227;HRun=0;HaplotypeScore=313.5632;InbreedingCoeff=0.2989;MQ=43.93;MQ0=20;MQRankSum=-9.068;QD=4.09;ReadPosRankSum=-0.119;VQSLOD=1.7923;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:90.25:0,90,1307	0/0:11,0:11:27.09:0,27,410	0/1:15,0:3:0:0,0,0	0/0:22,0:8:18.02:0,18,222	0/0:14,0:14:33.07:0,33,441	0/0:24,0:24:39.26:0,39,569	0/0:53,0:53:99:0,129,1793	0/0:24,0:23:62.75:0,63,787	0/0:19,0:19:51.10:0,51,737	0/1:41,6:46:99:398,0,382	0/1:17,8:25:0.35:1,0,0	0/0:34,0:34:71.94:0,72,974	0/0:23,0:23:60.02:0,60,813	1/1:22,13:34:7.89:110,8,0	0/0:21,13:34:3.02:0,3,17	1/1:11,9:20:12.62:159,13,0	0/0:30,0:30:76.95:0,77,1035	0/0:40,0:39:99:0,114,1511	0/1:22,0:17:47.92:48,0,165	0/0:19,3:22:3.93:0,4,22	1/1:23,3:22:1.63:28,2,0	0/0:15,0:15:36.11:0,36,527	0/0:14,0:14:26.95:0,27,390	0/0:46,0:46:78.09:0,78,1131	0/0:44,14:58:6.84:0,7,62	0/1:33,11:43:99:190,0,272	0/1:15,7:22:83.21:234,0,83	0/1:16,1:16:99:105,0,144
chr10	60116303	.	TGC	T	1182.79	PASS	AB=0.984;AC=18;AF=0.321;AN=56;BaseQRankSum=11.937;DP=794;FS=15.826;HRun=0;HaplotypeScore=305.0408;InbreedingCoeff=0.6038;MQ=44.11;MQ0=20;MQRankSum=-13.748;QD=3.26;ReadPosRankSum=-3.692;VQSLOD=0.2174;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:90.03:0,90,1591	0/0:11,0:11:27.09:0,27,510	0/1:14,1:3:0:0,0,0	0/0:21,1:8:10.14:0,10,165	0/0:14,0:14:33.07:0,33,536	0/0:23,0:23:38.75:0,39,610	0/0:52,0:52:99:0,124,1949	0/0:24,0:23:17.15:0,17,772	0/0:19,0:19:44.32:0,44,855	1/1:46,1:46:7.03:433,7,0	0/1:26,0:25:0.35:0,0,0	0/0:34,0:34:58.67:0,59,1182	0/0:22,0:22:56.86:0,57,950	1/1:32,2:33:8.24:33,8,0	1/1:32,2:33:7.54:39,8,0	1/1:18,1:19:10.60:76,11,0	0/0:30,0:30:59.10:0,59,1174	0/0:40,0:39:92.92:0,93,1717	0/1:21,0:16:74.56:76,0,75	0/0:21,0:21:0.36:0,0,2	0/1:27,0:23:0.14:0,0,0	0/0:15,0:15:36.08:0,36,641	0/0:15,0:15:33.08:0,33,536	0/0:47,0:47:80.05:0,80,1408	0/1:54,2:56:11.01:11,0,11	0/1:45,0:43:30.63:300,0,31	1/1:19,3:22:22.55:193,23,0	1/1:16,1:16:34.86:193,35,0
chr10	60116315	.	TGC	T	1950.13	PASS	AB=0.992;AC=24;AF=0.429;AN=56;BaseQRankSum=5.717;DP=777;FS=13.561;HRun=0;HaplotypeScore=282.1804;InbreedingCoeff=-0.3045;MQ=46.85;MQ0=15;MQRankSum=0.319;QD=3.33;ReadPosRankSum=3.055;VQSLOD=1.1276;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,110,1835	0/1:12,0:12:29.01:61,0,29	0/0:24,0:5:3.64:0,4,28	0/1:24,0:14:9.99:10,0,267	0/0:10,0:10:29.97:0,30,534	1/1:23,0:23:29.80:265,30,0	0/1:49,0:48:99:230,0,185	0/1:21,0:20:99:121,0,104	0/0:19,0:19:35.55:0,36,749	0/1:41,0:41:73.82:74,0,361	0/1:21,1:21:0.35:0,0,0	0/1:34,0:34:82.65:201,0,83	1/1:26,0:26:10.77:252,11,0	0/1:32,0:31:22.76:23,0,33	0/1:29,2:30:6.10:6,0,14	0/1:19,1:20:16.58:17,0,43	0/1:30,0:30:70.89:173,0,71	0/0:41,0:41:99:0,104,2029	0/1:16,0:11:10.81:11,0,128	0/0:18,1:19:2.85:0,3,24	0/0:26,4:28:14.71:0,15,102	0/1:12,0:12:17.68:78,0,18	0/1:14,0:14:36.39:67,0,36	0/1:51,0:51:7.21:292,0,7	1/1:45,0:45:1.91:13,2,0	0/1:47,0:45:99:153,0,173	0/1:19,0:19:26.55:27,0,89	0/1:16,0:15:37.51:38,0,38
chr10	60116317	.	CGT	C	5504.83	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=-0.310;DP=762;FS=4.634;HRun=0;HaplotypeScore=265.1398;InbreedingCoeff=0.8394;MQ=47.34;MQ0=13;MQRankSum=4.126;QD=18.66;ReadPosRankSum=3.337;VQSLOD=4.7747;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:49:99:0,105,1640	1/1:6,6:12:18.06:223,18,0	0/0:24,0:5:8.65:0,9,107	0/0:21,0:12:4.02:0,4,294	0/0:10,0:10:27.09:0,27,438	1/1:6,18:24:44.81:557,45,0	1/1:13,36:48:72.07:892,72,0	1/1:9,12:20:30.94:389,31,0	0/0:20,1:21:7.95:0,8,599	0/0:39,0:39:55.31:0,55,592	0/1:22,0:21:0.35:0,0,0	1/1:7,26:33:51.16:632,51,0	1/1:4,22:26:54.14:644,54,0	0/0:30,0:29:5.22:0,5,81	0/0:28,0:27:4.98:0,5,61	0/0:19,0:19:14.92:0,15,156	1/1:9,22:31:57.05:643,57,0	0/0:40,0:40:99:0,102,1667	0/0:15,0:10:15.02:0,15,187	0/0:18,0:18:3.06:0,3,49	0/0:30,0:29:14.97:0,15,210	1/1:1,10:11:24.08:297,24,0	1/1:5,10:15:21.07:260,21,0	1/1:10,41:51:79.66:969,80,0	0/0:43,0:43:4.26:0,4,29	0/0:44,0:42:39.35:0,39,410	0/0:20,0:20:15.25:0,15,150	0/0:16,0:15:12.88:0,13,110
chr10	60118245	.	CCA	C	9497.86	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=7.849;DP=431;FS=0.000;HRun=0;HaplotypeScore=216.5713;InbreedingCoeff=0.9539;MQ=72.30;MQ0=0;MQRankSum=-8.614;QD=23.74;ReadPosRankSum=5.612;VQSLOD=5.0690;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,21:22:50.78:425,51,0	1/1:1,4:5:15:130,15,0	0/0:17,0:17:32.59:0,33,711	0/0:14,0:13:38.92:0,39,626	1/1:0,17:17:41.92:350,42,0	1/1:0,14:14:42:365,42,0	1/1:2,9:11:29.94:251,30,0	1/1:3,11:14:41.98:386,42,0	1/1:1,17:18:53.67:456,54,0	1/1:0,16:16:48.08:464,48,0	1/1:1,13:14:35.86:292,36,0	1/1:2,21:23:65.90:557,66,0	1/1:1,15:16:47.97:413,48,0	1/1:1,12:13:38.79:326,39,0	1/1:1,23:24:68.98:597,69,0	1/1:2,17:19:56.64:472,57,0	1/1:1,11:12:29.96:254,30,0	1/1:1,14:15:44.82:391,45,0	1/1:4,10:14:39.05:370,39,0	1/1:0,10:11:20.91:177,21,0	1/1:1,6:8:17.97:152,18,0	1/1:1,11:12:32.98:282,33,0	1/1:2,19:21:50.87:422,51,0	1/1:0,10:11:20.98:179,21,0	1/1:4,16:21:60.30:508,60,0	1/1:1,24:25:75.06:695,75,0	1/1:0,21:21:57.01:504,57,0	1/1:0,3:3:9:81,9,0
chr10	60118248	.	TTCCTCACA	T	24170.09	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=8.695;DP=454;FS=0.606;HRun=0;HaplotypeScore=225.3210;InbreedingCoeff=0.8818;MQ=70.05;MQ0=0;MQRankSum=-7.256;QD=57.14;ReadPosRankSum=6.871;VQSLOD=4.5262;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,21:25:58.86:1167,59,0	1/1:1,4:5:8.10:267,8,0	0/0:17,0:17:48.15:0,48,1721	0/0:14,0:13:31.02:0,31,1215	1/1:1,17:18:38.20:929,38,0	1/1:0,14:14:42.14:951,42,0	1/1:7,9:16:26.91:679,27,0	1/1:6,11:17:50.36:869,50,0	1/1:0,17:17:51.18:1142,51,0	1/1:2,16:18:53.91:1164,54,0	1/1:3,13:16:28.24:780,28,0	1/1:2,21:23:69.10:1436,69,0	1/1:3,15:18:53.54:1106,54,0	1/1:2,12:14:42.01:890,42,0	1/1:1,23:24:69.10:1506,69,0	1/1:2,17:19:57.19:1252,57,0	1/1:2,11:13:35.85:670,36,0	1/1:4,14:18:46.96:1048,47,0	1/1:2,10:12:35.85:735,36,0	1/1:1,10:11:24.08:501,24,0	1/1:5,6:11:6.11:338,6,0	1/1:1,11:12:26.16:670,26,0	1/1:1,19:20:51.17:1115,51,0	1/1:1,10:11:21.07:471,21,0	1/1:3,16:19:57.06:1208,57,0	1/1:1,24:25:75.26:1713,75,0	1/1:1,21:22:63.08:1346,63,0	1/1:2,3:5:7.97:215,8,0
chr10	60118256	.	A	AGACT	5532.87	PASS	AB=0.852;AC=26;AF=0.464;AN=56;BaseQRankSum=-13.484;DP=530;FS=3.763;HRun=0;HaplotypeScore=265.5633;InbreedingCoeff=-0.5672;MQ=70.11;MQ0=0;MQRankSum=0.772;QD=11.90;ReadPosRankSum=-11.251;VQSLOD=1.5075;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:21,6:28:29.86:423,0,30	0/0:4,2:6:6.96:0,7,20	0/0:19,0:18:51.15:0,51,906	0/0:15,0:16:36.08:0,36,599	0/0:17,3:23:24.44:0,24,72	0/1:16,0:16:26.33:115,0,26	0/1:10,7:20:16.46:267,0,16	1/1:11,7:24:40.55:1097,41,0	0/1:20,0:20:18.66:291,0,19	1/1:18,2:23:0.53:278,1,0	0/1:13,4:17:32.98:60,0,33	0/1:21,1:22:47.93:295,0,48	0/1:16,2:21:35.74:288,0,36	0/1:16,1:17:24.63:162,0,25	0/1:23,1:25:58.69:143,0,59	0/1:18,3:22:38.12:124,0,38	0/1:11,5:18:16.76:347,0,17	0/1:17,5:22:24.41:212,0,24	0/1:10,2:13:8.06:228,0,8	0/1:14,0:14:7.49:109,0,7	0/1:8,5:17:6.97:120,0,7	0/1:11,2:16:28.65:32,0,29	0/1:19,1:20:47.60:48,0,64	0/1:11,0:11:19.83:45,0,20	0/1:17,2:21:47.36:159,0,47	0/1:24,2:28:33.83:271,0,34	0/1:21,3:24:28.37:344,0,28	0/1:3,3:6:5.29:74,0,5
chr10	60119530	.	AGGGGTT	A	1846.15	PASS	AC=22;AF=0.440;AN=50;BaseQRankSum=3.356;DP=205;FS=0.908;HRun=0;HaplotypeScore=47.9465;InbreedingCoeff=0.6216;MQ=80.61;MQ0=0;MQRankSum=-4.290;QD=23.98;ReadPosRankSum=0.748;VQSLOD=2.6959;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:24.04:0,24,641	0/0:4,0:4:3.01:0,3,99	0/0:20,0:13:6.66:0,7,207	0/0:15,0:13:2.73:0,3,239	0/0:5,0:5:6.02:0,6,168	0/0:7,0:9:9:0,9,129	0/0:10,0:12:12.04:0,12,237	0/0:9,0:9:3.01:0,3,99	0/0:3,0:3:6.02:0,6,198	1/1:4,3:7:9.03:189,9,0	1/1:1,2:3:6.02:121,6,0	0/0:3,0:8:12.04:0,12,280	./.	1/1:3,7:11:18.06:379,18,0	1/1:3,3:6:12.04:252,12,0	1/1:2,3:5:9.03:189,9,0	0/0:11,0:11:3.01:0,3,99	0/0:5,0:5:12.01:0,12,318	./.	1/1:0,2:2:6.02:122,6,0	1/1:8,8:16:8.92:179,9,0	0/0:2,0:4:3.01:0,3,79	1/1:4,0:4:3.01:62,3,0	0/0:4,0:4:2.99:0,3,24	./.	1/1:5,7:13:21.06:402,21,0	1/1:6,3:9:3.01:59,3,0	1/1:0,1:1:3.01:63,3,0
chr10	60120106	.	A	AAG	5793.07	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-13.897;DP=751;FS=1.253;HRun=0;HaplotypeScore=87.0322;InbreedingCoeff=1.0000;MQ=86.81;MQ0=0;MQRankSum=-1.207;QD=48.68;ReadPosRankSum=1.803;VQSLOD=6.0277;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,35:38:86.88:1646,87,0	0/0:17,0:17:51.17:0,51,779	0/0:35,0:35:99:0,105,1476	0/0:19,0:19:45.08:0,45,623	1/1:1,36:38:99:1927,105,0	0/0:32,0:31:93.31:0,93,1403	0/0:18,0:18:51.15:0,51,738	0/0:35,0:35:96.32:0,96,1451	1/1:0,23:23:63.22:1195,63,0	0/0:36,0:36:99:0,105,1566	0/0:28,0:28:84.27:0,84,1247	0/0:21,0:21:63.21:0,63,945	0/0:21,0:21:63.21:0,63,945	0/0:31,0:31:93.32:0,93,1424	0/0:20,0:20:60.20:0,60,896	0/0:27,0:27:78.26:0,78,1174	0/0:32,0:32:96.31:0,96,1449	1/1:0,20:20:54.19:1025,54,0	0/0:22,0:22:54.18:0,54,827	0/0:18,0:18:51.15:0,51,741	0/0:34,0:34:99:0,99,1514	0/0:24,0:24:63.21:0,63,963	0/0:28,0:28:81.28:0,81,1240	0/0:24,0:24:72.20:0,72,1073	0/0:21,0:21:63.16:0,63,920	0/0:41,0:41:99:0,120,1743	0/0:35,0:34:99:0,99,1455	0/0:13,0:13:39.12:0,39,576
chr10	60120784	.	G	GAAAA	13307.01	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=3.938;DP=696;FS=3.627;HRun=9;HaplotypeScore=155.1209;InbreedingCoeff=0.9946;MQ=72.47;MQ0=0;MQRankSum=-15.166;QD=45.11;ReadPosRankSum=-5.416;VQSLOD=1.4616;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:96.26:0,96,1359	0/0:17,0:17:45.12:0,45,657	0/0:16,0:16:42.05:0,42,544	0/0:23,0:23:38.96:0,39,569	0/0:31,0:32:87.10:0,87,1203	0/0:28,0:28:78.21:0,78,1099	0/0:18,0:18:54.18:0,54,788	0/0:35,0:35:81.10:0,81,1150	0/0:17,0:17:45.08:0,45,600	1/1:21,10:33:13.48:1133,13,0	1/1:5,14:20:48.12:1062,48,0	0/0:20,0:20:57.17:0,57,811	0/0:26,0:26:72.20:0,72,1048	1/1:3,12:18:39.13:908,39,0	1/1:4,11:19:45.15:973,45,0	1/1:7,17:28:19.33:1305,19,0	0/0:27,0:27:75.21:0,75,1097	0/0:22,0:22:63.21:0,63,921	1/1:14,10:26:48.16:1020,48,0	1/1:8,12:24:61.42:1253,61,0	1/1:5,6:20:18.04:345,18,0	0/0:24,0:24:63.19:0,63,922	0/0:32,0:32:84.22:0,84,1209	0/0:30,0:30:81.22:0,81,1185	1/1:9,11:22:36.12:821,36,0	1/1:11,19:31:84.19:1640,84,0	1/1:11,22:40:99:2272,106,0	1/1:3,10:14:24.08:577,24,0
chr10	60121719	.	ATTTATAT	A	6005.42	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=13.460;DP=495;FS=5.161;HRun=0;HaplotypeScore=123.9219;InbreedingCoeff=0.9933;MQ=59.65;MQ0=1;MQRankSum=-13.231;QD=75.07;ReadPosRankSum=4.232;VQSLOD=5.4163;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:25:75.26:0,75,3138	0/0:8,0:8:24.07:0,24,907	0/0:13,0:7:15.52:0,16,471	0/0:10,0:9:24.08:0,24,879	0/0:26,0:26:75.73:0,76,2769	1/1:0,18:18:51.18:1344,51,0	1/1:0,10:10:30.10:790,30,0	0/0:29,0:29:84.29:0,84,3271	0/0:15,0:15:45.15:0,45,1824	0/0:29,0:28:84.29:0,84,3376	0/0:16,0:16:48.16:0,48,1949	1/1:0,13:13:36.12:948,36,0	1/1:0,11:11:33.11:869,33,0	0/0:19,0:19:57.20:0,57,2350	0/0:13,0:13:39.13:0,39,1604	0/0:10,0:10:30.10:0,30,1181	0/0:26,0:26:75.26:0,75,2944	0/0:30,0:30:87.74:0,88,3281	0/0:23,0:21:57.20:0,57,2238	0/0:17,0:17:51.14:0,51,1872	0/0:14,0:14:42.14:0,42,1763	1/1:0,13:13:36.12:948,36,0	1/1:0,9:9:27.09:711,27,0	1/1:0,6:6:15.05:395,15,0	0/0:21,0:21:63.22:0,63,2550	0/0:16,0:16:48.16:0,48,1907	0/0:39,0:39:99:0,117,4668	0/0:15,0:15:45.15:0,45,1721
chr10	60121996	.	A	AT	5765.75	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=5.487;DP=585;FS=8.956;HRun=8;HaplotypeScore=72.2563;InbreedingCoeff=0.9893;MQ=66.71;MQ0=1;MQRankSum=1.958;QD=25.29;ReadPosRankSum=2.493;VQSLOD=5.5177;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:93.03:0,93,845	0/0:9,0:9:24.01:0,24,219	0/0:13,0:12:29.82:0,30,246	0/0:15,0:13:27:0,27,245	0/0:21,0:21:57.02:0,57,516	0/0:19,0:18:45.02:0,45,411	0/0:21,0:21:57.03:0,57,521	0/0:34,0:34:81.01:0,81,734	0/0:11,0:10:30:0,30,270	1/1:9,28:37:93.22:1045,93,0	1/1:1,8:9:21.06:242,21,0	0/0:23,0:23:66.04:0,66,603	0/0:34,0:34:86.99:0,87,784	1/1:2,15:17:36.11:415,36,0	1/1:1,26:27:63.19:725,63,0	1/1:2,12:14:30.09:346,30,0	0/0:40,0:40:96.51:0,97,940	0/0:27,0:27:68.43:0,68,669	1/1:3,14:17:42.12:481,42,0	1/1:2,14:16:42.08:468,42,0	1/1:3,16:19:39.12:450,39,0	0/0:16,0:16:45:0,45,406	0/0:9,0:9:26.96:0,27,235	0/0:29,0:29:75.03:0,75,682	1/1:0,6:6:18.05:208,18,0	1/1:6,21:27:63.19:727,63,0	1/1:9,23:32:48.61:554,49,0	1/1:0,7:7:9.03:104,9,0
chr10	60122118	.	C	CGT	706.29	PASS	AB=0.901;AC=21;AF=0.438;AN=48;BaseQRankSum=-3.225;DP=501;FS=27.300;HRun=0;HaplotypeScore=85.3515;InbreedingCoeff=-0.0696;MQ=66.18;MQ0=7;MQRankSum=0.436;QD=2.74;ReadPosRankSum=-0.753;VQSLOD=0.2659;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:34:8.52:0,9,42	1/1:2,0:2:3.01:42,3,0	./.	./.	0/0:11,0:15:5.68:0,6,28	1/1:7,5:12:3.01:44,3,0	1/1:26,4:30:6.02:88,6,0	./.	0/0:6,0:10:5.68:0,6,28	0/0:17,0:17:5.98:0,6,53	0/0:9,0:10:0:0,0,0	0/1:9,2:11:39.82:76,0,40	0/1:12,1:12:35.11:35,0,54	0/0:13,0:14:5.84:0,6,46	0/1:9,1:11:24.82:35,0,25	0/1:10,2:12:39.84:76,0,40	0/1:20,11:32:54.39:173,0,54	0/0:10,0:11:2.84:0,3,14	0/0:10,0:10:3.01:0,3,32	0/0:15,0:15:12.02:0,12,121	0/1:51,0:52:47.98:54,0,48	1/1:11,0:11:3.01:43,3,0	1/1:12,3:16:3.01:44,3,0	0/1:20,6:26:69.89:70,0,111	1/1:8,6:14:2.89:44,3,0	./.	0/1:13,0:14:8.10:8,0,96	0/1:2,0:2:14.03:14,0,26
chr10	60122679	.	GGA	G	1353.60	PASS	AB=0.969;AC=12;AF=0.214;AN=56;BaseQRankSum=5.070;DP=540;FS=32.937;HRun=0;HaplotypeScore=77.9753;InbreedingCoeff=0.6496;MQ=48.74;MQ0=44;MQRankSum=1.194;QD=14.25;ReadPosRankSum=2.155;VQSLOD=1.1897;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,14:20:41.60:534,42,0	0/0:2,0:2:3.01:0,3,51	0/0:69,1:16:21.66:0,22,309	0/0:85,1:20:10.65:0,11,363	1/1:4,8:12:18.06:230,18,0	0/0:18,0:17:21.41:0,21,634	0/0:20,0:21:41.95:0,42,894	0/0:19,0:18:45.15:0,45,733	1/1:5,9:14:27.02:326,27,0	0/0:21,0:13:27.56:0,28,427	0/0:10,0:7:15.05:0,15,252	0/0:17,0:17:37.89:0,38,562	0/0:20,0:20:46.04:0,46,745	0/0:16,0:11:3.49:0,3,270	0/0:7,0:5:6.02:0,6,85	0/0:12,0:11:12.04:0,12,201	0/0:14,0:14:33.11:0,33,556	1/1:1,11:11:30.02:385,30,0	0/1:14,1:15:11.53:12,0,347	0/0:17,0:12:18.06:0,18,303	0/0:24,0:12:12.04:0,12,183	0/0:11,0:11:27.09:0,27,452	0/0:15,0:15:16.84:0,17,534	0/0:17,0:17:31.21:0,31,481	0/0:13,0:9:15.05:0,15,251	0/1:16,0:13:19.09:19,0,417	0/0:14,0:6:18.04:0,18,255	1/1:5,0:3:2.94:18,3,0
chr10	60122691	.	AAG	A	309.25	PASS	AB=0.895;AC=6;AF=0.107;AN=56;BaseQRankSum=6.956;DP=588;FS=47.308;HRun=0;HaplotypeScore=98.1694;InbreedingCoeff=0.1351;MQ=44.37;MQ0=51;MQRankSum=-4.532;QD=3.82;ReadPosRankSum=1.405;VQSLOD=0.2968;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:17:18.92:0,19,177	0/0:1,1:2:3.01:0,3,57	0/0:75,0:14:25.13:0,25,447	0/0:86,1:18:21.31:0,21,474	0/0:15,1:15:16.13:0,16,93	0/0:17,2:18:6.45:0,6,785	0/0:22,1:23:41.16:0,41,1083	0/0:25,0:22:61.44:0,61,1179	0/0:14,1:15:11.91:0,12,88	0/1:19,3:14:74.36:74,0,493	0/0:11,1:9:15.04:0,15,301	0/0:15,0:14:38.24:0,38,710	0/0:19,0:19:45.12:0,45,893	0/0:15,2:11:6.68:0,7,335	0/0:8,0:5:6.02:0,6,120	0/0:13,3:14:11.91:0,12,226	0/0:14,0:14:36.12:0,36,669	0/1:11,1:11:13.66:14,0,57	0/0:14,0:14:30.99:0,31,574	0/0:12,6:13:1.10:0,1,341	0/0:25,1:14:21.03:0,21,309	0/0:11,3:14:34:0,34,629	0/0:14,5:18:15.73:0,16,685	0/0:17,0:16:33.82:0,34,605	0/0:10,6:12:15:0,15,303	0/1:21,3:21:99:131,0,639	0/1:14,2:7:81.84:82,0,164	1/1:4,3:5:11.97:132,12,0
chr10	60122712	.	AAGAG	A	104.96	PASS	AB=1.000;AC=8;AF=0.174;AN=46;BaseQRankSum=1.136;DP=532;FS=1.702;HRun=0;HaplotypeScore=112.1907;InbreedingCoeff=0.1418;MQ=38.32;MQ0=68;MQRankSum=0.700;QD=1.10;ReadPosRankSum=0.536;VQSLOD=2.3057;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:3.01:0,3,40	1/1:3,0:2:2.74:12,3,0	./.	./.	0/0:17,0:16:3.45:0,3,22	0/0:15,0:14:3.47:0,3,26	0/0:25,0:24:9.01:0,9,165	0/0:23,0:20:4.19:0,4,13	0/0:19,0:19:12.03:0,12,174	0/1:23,0:14:0.84:1,0,84	0/0:9,0:6:2.99:0,3,23	0/0:15,0:14:15.04:0,15,224	0/0:20,0:20:7.85:0,8,112	./.	0/0:10,0:4:2.98:0,3,22	0/1:17,0:13:14.94:15,0,15	1/1:10,5:15:9.03:139,9,0	0/0:17,0:15:13.99:0,14,69	0/1:17,0:16:13.64:17,0,14	./.	./.	0/0:16,0:16:10.87:0,11,148	0/0:17,0:15:2.37:0,2,9	0/1:20,0:19:33.99:34,0,158	0/0:16,0:10:0.84:0,1,2	0/0:24,0:18:10.50:0,10,53	0/0:18,0:4:2.03:0,2,4	0/0:9,0:7:2.88:0,3,15
chr10	60122715	.	A	AG	1233	PASS	AB=0.816;AC=16;AF=0.286;AN=56;BaseQRankSum=-2.775;DP=543;FS=0.000;HRun=1;HaplotypeScore=110.7423;InbreedingCoeff=0.2226;MQ=36.34;MQ0=68;MQRankSum=-3.508;QD=5.10;ReadPosRankSum=-1.133;VQSLOD=-0.2677;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:24.03:0,24,306	0/0:3,0:2:5.95:0,6,54	0/0:33,0:2:6.02:0,6,76	0/1:47,0:7:2.70:3,0,145	0/0:17,0:16:11.70:0,12,139	0/0:18,0:17:16.93:0,17,276	0/0:27,0:26:47.32:0,47,544	0/0:23,0:20:57.11:0,57,672	0/0:20,0:19:29.91:0,30,341	0/1:18,6:15:10.17:337,0,10	1/1:9,3:9:2.88:40,3,0	0/0:17,0:16:29.37:0,29,336	0/0:20,0:20:47.96:0,48,564	0/1:15,2:11:24.31:31,0,24	1/1:9,3:6:3.90:43,4,0	0/1:8,11:15:10.40:69,0,10	0/0:16,0:16:29.80:0,30,317	0/0:19,0:15:27.91:0,28,345	1/1:6,12:17:15.36:384,15,0	0/1:11,2:8:2.53:33,0,3	1/1:27,4:17:5.91:38,6,0	0/0:16,0:16:31.91:0,32,387	0/0:17,0:15:20.53:0,21,261	0/0:18,0:17:16.52:0,17,213	0/0:12,3:10:0.05:0,0,77	0/1:19,6:19:35.13:355,0,35	0/1:12,4:3:26.55:29,0,27	0/1:5,3:6:32.93:33,0,42
chr10	60122716	.	GA	G	1038.09	PASS	AB=0.811;AC=16;AF=0.286;AN=56;BaseQRankSum=-0.443;DP=533;FS=0.000;HRun=1;HaplotypeScore=95.7192;InbreedingCoeff=0.2431;MQ=36.40;MQ0=68;MQRankSum=-3.294;QD=4.34;ReadPosRankSum=0.343;VQSLOD=0.1052;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:24.03:0,24,314	0/0:3,0:2:5.95:0,6,48	0/0:31,0:2:6.02:0,6,76	0/1:45,0:7:2.70:3,0,145	0/0:16,0:15:11.72:0,12,152	0/0:17,0:16:14.11:0,14,272	0/0:27,0:26:49.87:0,50,608	0/0:23,0:20:57.49:0,57,677	0/0:20,0:19:29.91:0,30,369	0/1:13,10:14:3.47:290,0,3	1/1:9,3:9:2.88:40,3,0	0/0:16,0:15:30.06:0,30,416	0/0:20,0:20:47.96:0,48,601	0/1:8,9:11:24.52:31,0,25	1/1:8,4:6:4.26:43,4,0	0/1:19,0:15:13.33:14,0,13	0/0:16,0:16:25.73:0,26,278	0/0:18,0:14:33.24:0,33,387	1/1:17,1:17:13.68:369,14,0	0/1:8,5:8:3.04:33,0,3	1/1:17,15:18:5.84:38,6,0	0/0:15,0:15:35.44:0,35,429	0/0:17,0:15:20.91:0,21,272	0/0:18,0:17:12.06:0,12,214	0/0:14,2:10:0.56:0,1,85	0/1:18,7:19:51.40:294,0,51	0/1:11,5:3:26.55:29,0,27	0/1:6,1:5:14.02:14,0,42
chr10	60123924	.	G	GT	6813.87	PASS	AB=0.810;AC=33;AF=0.589;AN=56;BaseQRankSum=-7.652;DP=682;FS=0.723;HRun=12;HaplotypeScore=70.9732;InbreedingCoeff=0.4811;MQ=69.47;MQ0=0;MQRankSum=-0.876;QD=14.11;ReadPosRankSum=0.164;VQSLOD=5.2731;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,40:53:99:949,102,0	0/1:8,1:10:12.23:12,0,76	0/1:13,0:13:16.10:16,0,46	0/1:11,0:9:13.92:14,0,43	0/1:11,18:31:5.91:394,0,6	0/0:14,0:14:35.74:0,36,263	0/0:19,1:21:16.65:0,17,267	0/0:41,0:41:13.95:0,14,404	1/1:3,13:18:25.84:386,26,0	1/1:8,27:34:47.27:615,47,0	1/1:4,5:9:4.91:182,5,0	0/0:18,2:20:18.54:0,19,299	0/0:22,0:22:47.65:0,48,348	1/1:4,21:29:27.84:419,28,0	1/1:3,23:28:53.75:491,54,0	0/1:11,21:34:2.71:447,0,3	0/0:24,1:25:36.43:0,36,429	1/1:3,13:20:28.11:222,28,0	0/1:17,17:36:3.04:405,0,3	1/1:5,23:29:22.12:525,22,0	1/1:4,14:18:34.89:349,35,0	0/1:15,2:18:23.59:24,0,168	0/0:26,4:30:1.25:0,1,335	0/0:25,1:26:30.46:0,30,387	1/1:6,18:25:44.91:423,45,0	1/1:10,20:32:50.70:447,51,0	1/1:11,19:32:31.94:435,32,0	1/1:0,2:2:6.01:58,6,0
chr10	60124600	.	GCACA	G	3228.29	PASS	AB=0.994;AC=30;AF=0.536;AN=56;BaseQRankSum=-0.791;DP=626;FS=9.051;HRun=0;HaplotypeScore=161.9545;InbreedingCoeff=0.5137;MQ=65.76;MQ0=9;MQRankSum=1.643;QD=7.82;ReadPosRankSum=4.149;VQSLOD=1.9541;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:29:8.74:59,9,0	1/1:10,0:10:9.34:56,9,0	0/0:23,0:12:5.94:0,6,42	0/0:33,0:20:1.51:0,2,4	1/1:7,0:25:13.75:106,14,0	1/1:17,6:25:22.41:413,22,0	1/1:17,8:26:14.91:204,15,0	0/0:21,0:20:14.96:0,15,125	1/1:8,0:27:30.49:274,30,0	0/0:17,0:22:16.17:0,16,482	0/0:16,0:21:32.13:0,32,574	1/1:8,11:22:20.94:272,21,0	1/1:13,8:23:34.50:517,35,0	0/1:23,0:27:0.34:0,0,199	0/1:25,0:29:4.40:4,0,207	0/1:20,0:22:44.33:44,0,142	0/1:31,0:31:87.58:134,0,88	1/1:4,0:10:6.01:56,6,0	0/0:11,0:9:7.21:0,7,49	0/1:20,1:25:8.28:8,0,535	0/0:14,0:14:10.01:0,10,128	1/1:6,11:19:20.96:283,21,0	1/1:11,3:14:14.83:182,15,0	1/1:14,25:39:44.68:792,45,0	0/0:21,0:21:11.21:0,11,216	0/0:10,0:10:6.02:0,6,125	0/0:30,0:34:53.14:0,53,847	0/1:9,0:9:17.58:18,0,197
chr10	60124636	.	ACACACT	A	1947.03	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=0.304;DP=674;FS=13.574;HRun=0;HaplotypeScore=190.2399;InbreedingCoeff=0.1034;MQ=52.73;MQ0=18;MQRankSum=-4.382;QD=5.53;ReadPosRankSum=-1.986;VQSLOD=1.3976;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:30:36.38:36,0,151	1/1:11,2:13:36.01:399,36,0	0/0:23,0:8:3.12:0,3,54	0/0:22,0:8:12.83:0,13,127	0/1:33,0:33:49.53:50,0,224	0/1:30,0:30:99:121,0,264	0/0:32,0:32:25.87:0,26,386	1/1:23,0:16:32.96:291,33,0	1/1:23,0:23:7.94:221,8,0	0/0:25,0:25:59.06:0,59,909	0/0:19,0:19:29.13:0,29,803	0/1:25,0:25:55.29:55,0,227	0/1:27,0:27:40.81:41,0,283	0/1:26,0:26:93.94:94,0,206	0/1:27,0:27:1.91:2,0,296	0/1:18,0:18:14.51:15,0,123	1/1:27,3:30:44.70:726,45,0	0/1:13,0:13:18.76:19,0,139	0/0:15,0:11:17.88:0,18,138	0/0:25,0:24:29.64:0,30,728	0/0:24,0:22:15.88:0,16,278	0/1:16,0:16:48.56:49,0,82	0/1:18,0:17:6.52:7,0,195	0/0:45,0:44:55.48:0,55,435	0/0:25,0:25:11.72:0,12,283	0/0:14,0:14:21.38:0,21,402	0/0:32,0:31:22.78:0,23,1214	0/0:21,0:20:5.23:0,5,265
chr10	60124638	.	ACACT	A	2623.47	PASS	AB=0.988;AC=20;AF=0.357;AN=56;BaseQRankSum=1.929;DP=676;FS=7.744;HRun=0;HaplotypeScore=171.7930;InbreedingCoeff=-0.0471;MQ=52.98;MQ0=17;MQRankSum=-1.212;QD=6.45;ReadPosRankSum=2.439;VQSLOD=2.2577;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:31:0.58:0,1,176	1/1:13,0:13:35.96:313,36,0	0/0:23,0:9:5.49:0,5,71	0/0:21,0:9:15.85:0,16,161	0/1:33,0:33:24.88:25,0,222	0/1:31,0:31:99:226,0,193	0/1:32,0:32:78.04:78,0,296	1/1:24,0:17:41.98:375,42,0	1/1:23,0:23:4.16:82,4,0	0/0:24,0:24:20.41:0,20,666	0/0:19,0:19:29.13:0,29,581	0/1:25,0:25:81.68:82,0,190	0/1:27,0:27:99:252,0,181	0/1:27,0:27:97.84:98,0,174	0/1:24,1:25:73.09:73,0,185	0/1:16,1:17:58.15:92,0,58	1/1:30,1:31:46.07:563,46,0	0/0:13,0:13:7.98:0,8,148	0/0:15,0:11:17.66:0,18,137	0/0:24,0:23:11.18:0,11,525	0/0:24,0:22:0:0,0,186	0/1:16,0:16:29.63:99,0,30	0/1:17,1:17:54.95:55,0,164	0/1:44,0:43:99:346,0,166	0/0:26,0:26:11.83:0,12,207	0/0:14,0:14:20.89:0,21,331	0/0:34,0:33:17.17:0,17,903	0/1:21,0:20:37.97:38,0,177
chr10	60124640	.	ACT	A	1231.18	PASS	AB=0.995;AC=14;AF=0.250;AN=56;BaseQRankSum=-2.667;DP=679;FS=22.127;HRun=0;HaplotypeScore=162.1305;InbreedingCoeff=0.2222;MQ=53.37;MQ0=16;MQRankSum=2.158;QD=4.63;ReadPosRankSum=-6.050;VQSLOD=-0.3415;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:4.65:0,5,187	1/1:12,1:13:35.83:281,36,0	0/0:24,0:9:8.47:0,8,106	0/0:20,0:9:9.05:0,9,152	0/0:33,0:33:22.52:0,23,263	0/1:32,0:32:48.10:48,0,280	0/0:32,0:32:27.76:0,28,353	1/1:26,0:19:13.27:389,13,0	0/0:23,0:23:15.83:0,16,52	0/0:24,0:24:34.07:0,34,479	0/0:18,0:18:29.04:0,29,362	0/0:25,0:25:41.28:0,41,277	0/1:27,0:27:5.93:6,0,256	0/1:26,0:26:67.69:68,0,113	0/1:24,0:24:31.97:32,0,131	0/1:16,0:16:40.18:55,0,40	1/1:28,2:30:49.80:494,50,0	0/0:14,0:14:27.55:0,28,201	0/0:14,0:10:23.39:0,23,163	0/0:27,0:26:4.30:0,4,365	0/1:24,0:22:8.86:9,0,105	0/0:17,0:17:28.92:0,29,143	0/0:17,0:16:12.53:0,13,195	0/0:44,0:43:45.82:0,46,356	0/1:26,0:26:3.12:3,0,120	0/0:15,0:15:18.52:0,19,237	0/0:34,1:34:20.89:0,21,548	0/1:21,1:22:11.94:12,0,132
chr10	60124652	.	T	TCA	4984.86	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-5.567;DP=696;FS=10.988;HRun=0;HaplotypeScore=154.7075;InbreedingCoeff=0.9495;MQ=58.07;MQ0=11;MQRankSum=1.959;QD=17.43;ReadPosRankSum=-1.456;VQSLOD=4.3487;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:43.01:0,43,515	0/0:12,0:12:21.07:0,21,264	0/0:28,0:12:25.99:0,26,265	0/0:23,0:12:5.49:0,5,369	0/0:36,0:36:57.17:0,57,716	0/0:29,0:29:62.86:0,63,768	0/0:33,0:33:74.98:0,75,899	0/0:27,0:22:60.16:0,60,721	0/0:19,0:19:33.37:0,33,381	1/1:9,20:29:41.13:978,41,0	1/1:6,11:17:27.07:403,27,0	0/0:22,0:22:42.14:0,42,540	0/0:29,0:29:63.20:0,63,809	1/1:8,14:23:24.02:328,24,0	1/1:9,16:25:19.28:267,19,0	1/1:12,10:22:6.02:101,6,0	0/0:26,0:26:48.49:0,48,553	0/0:13,0:13:33.11:0,33,418	1/1:2,12:12:30.10:499,30,0	1/1:8,18:25:34.34:531,34,0	1/1:8,17:26:8.68:151,9,0	0/0:16,0:16:33.11:0,33,424	0/0:19,0:19:42.13:0,42,529	0/0:43,0:43:80.81:0,81,1039	1/1:3,26:29:9.03:152,9,0	1/1:2,15:18:41.60:606,42,0	1/1:12,23:34:39.13:657,39,0	1/1:5,17:22:20.43:311,20,0
chr10	60133553	.	CATACATATATATAT	C	1586.95	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.407;DP=535;FS=11.844;HRun=0;HaplotypeScore=200.5427;InbreedingCoeff=0.9313;MQ=65.54;MQ0=2;MQRankSum=-4.656;QD=52.90;ReadPosRankSum=-0.481;VQSLOD=2.4601;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:32.46:0,32,3012	0/0:6,0:6:18.06:0,18,985	0/0:9,0:6:11.82:0,12,200	0/0:22,0:13:16.23:0,16,162	0/0:35,0:35:90.24:0,90,4279	0/0:21,0:21:57.18:0,57,3372	0/0:12,0:12:30.10:0,30,1747	0/0:30,0:30:79.81:0,80,3345	0/0:17,0:17:42.14:0,42,2022	0/0:23,0:23:54.18:0,54,2860	0/0:24,0:23:57.18:0,57,3201	0/0:13,0:13:36.12:0,36,2029	0/0:19,0:19:51.18:0,51,3093	0/0:12,0:12:30.09:0,30,1683	0/0:13,0:13:30.09:0,30,1782	0/0:16,0:15:48.15:0,48,2688	0/0:26,0:26:75.20:0,75,4194	0/0:25,0:25:36.40:0,36,2577	0/0:14,0:14:33.10:0,33,1263	1/1:3,27:30:54.18:1682,54,0	0/0:10,0:10:27.09:0,27,1623	0/0:5,0:5:15.05:0,15,786	0/0:11,0:11:33.09:0,33,1884	0/0:9,0:9:24.08:0,24,1351	0/0:20,0:19:54.19:0,54,2992	0/0:27,0:27:63.20:0,63,3231	0/0:31,0:31:84.29:0,84,4803	0/0:24,0:24:66.23:0,66,3204
chr10	60135500	.	CTCTCTCTCTT	C	1954.56	PASS	AB=0.996;AC=31;AF=0.574;AN=54;BaseQRankSum=2.330;DP=531;FS=2.965;HRun=0;HaplotypeScore=200.8147;InbreedingCoeff=-0.1100;MQ=54.93;MQ0=8;MQRankSum=-0.249;QD=4.85;ReadPosRankSum=2.330;VQSLOD=2.3963;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:16:4.55:30,5,0	0/0:10,0:10:20.90:0,21,168	0/0:20,0:12:1.33:0,1,55	0/1:36,0:17:33.96:37,0,34	1/1:12,1:13:5.33:49,5,0	0/1:23,0:23:25.20:25,0,102	0/1:31,0:31:89.30:89,0,219	0/1:35,0:35:77.74:78,0,431	1/1:15,1:16:1.60:151,2,0	0/1:15,0:15:7.39:224,0,7	./.	0/1:32,0:32:68.82:160,0,69	0/1:30,0:30:99:139,0,190	1/1:6,0:6:11.93:93,12,0	1/1:18,0:17:5.83:50,6,0	0/1:15,0:15:14.16:67,0,14	0/0:28,0:28:36.50:0,37,284	1/1:8,0:8:1.78:92,2,0	0/1:14,0:13:10.86:167,0,11	1/1:14,0:14:21.04:181,21,0	1/1:11,0:11:11.99:100,12,0	0/0:26,0:26:33.39:0,33,242	0/1:24,0:24:9.99:10,0,56	0/0:37,0:37:51.18:0,51,392	1/1:12,1:13:7.24:36,7,0	0/1:10,0:10:16.10:184,0,16	0/1:16,1:16:28.90:127,0,29	0/1:6,0:5:17.71:33,0,18
chr10	60135502	.	CTCTCTCTT	C	2053.07	PASS	AB=1.000;AC=33;AF=0.611;AN=54;BaseQRankSum=3.496;DP=525;FS=5.293;HRun=0;HaplotypeScore=185.1303;InbreedingCoeff=0.0802;MQ=52.11;MQ0=8;MQRankSum=-2.971;QD=5.04;ReadPosRankSum=0.674;VQSLOD=2.2415;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:19:6.35:35,6,0	0/0:10,0:10:14.39:0,14,145	0/0:16,0:7:1.33:0,1,55	0/1:35,0:16:33.96:37,0,34	1/1:11,0:11:5.41:49,5,0	0/1:24,0:24:14.97:15,0,104	0/1:33,0:33:73.57:74,0,223	0/1:35,0:35:99:155,0,309	1/1:18,0:18:3.62:133,4,0	1/1:15,0:15:13.41:235,13,0	./.	0/1:33,0:33:74.71:173,0,75	0/1:30,0:30:99:175,0,212	1/1:6,0:6:11.93:93,12,0	1/1:17,0:16:5.83:50,6,0	1/1:15,0:15:4.28:83,4,0	0/1:27,0:27:8.78:9,0,226	1/1:8,0:8:17.86:129,18,0	0/1:12,0:11:2.92:167,0,3	1/1:13,0:13:21.04:167,21,0	1/1:11,0:11:11.99:100,12,0	0/0:25,0:25:33.39:0,33,242	0/0:25,0:25:8.77:0,9,58	0/0:37,0:37:51.18:0,51,392	1/1:12,0:12:7.24:36,7,0	0/1:10,0:10:3.86:160,0,4	0/1:17,0:16:0.67:114,0,1	0/1:6,0:5:10.24:33,0,10
chr10	60135510	.	TTCTCTC	T	1840.97	PASS	AB=1.000;AC=37;AF=0.841;AN=44;BaseQRankSum=0.857;DP=502;FS=18.027;HRun=0;HaplotypeScore=171.0264;InbreedingCoeff=-0.0456;MQ=48.31;MQ0=8;MQRankSum=1.960;QD=4.44;ReadPosRankSum=1.919;VQSLOD=1.4682;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:16:2.27:8,2,0	1/1:7,1:8:3.01:63,3,0	./.	./.	0/0:6,0:6:0:0,0,0	1/1:7,15:23:9.50:128,10,0	1/1:13,15:32:9.39:118,9,0	1/1:17,15:32:41.85:421,42,0	0/1:20,0:19:6.76:47,0,7	0/1:15,0:15:19.38:19,0,72	./.	1/1:9,21:34:14.25:270,14,0	1/1:10,17:30:23.55:356,24,0	./.	./.	1/1:16,0:15:6.52:38,7,0	1/1:12,14:26:6.02:120,6,0	1/1:9,0:9:0.82:2,1,0	0/1:13,0:11:51.30:51,0,62	1/1:14,0:14:4.25:19,4,0	./.	1/1:5,15:22:14.75:98,15,0	1/1:4,19:24:12.26:90,12,0	1/1:16,17:33:2.21:19,2,0	1/1:13,0:13:4.32:11,4,0	0/1:11,0:11:12.94:13,0,50	1/1:18,0:17:5.72:47,6,0	0/1:6,0:5:11.39:12,0,11
chr10	60135558	.	G	GCACA	4420.80	PASS	AB=0.565;AC=21;AF=0.438;AN=48;BaseQRankSum=9.163;DP=489;FS=15.571;HRun=0;HaplotypeScore=210.9463;InbreedingCoeff=0.8533;MQ=63.29;MQ0=0;MQRankSum=-10.630;QD=29.47;ReadPosRankSum=3.055;VQSLOD=3.1090;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:3,10:13:0:0,0,0	0/0:8,0:8:24.08:0,24,439	0/0:19,0:14:37.62:0,38,485	0/0:13,0:9:14.80:0,15,157	./.	0/0:26,0:26:42.12:0,42,678	0/0:32,0:32:51.15:0,51,803	0/0:20,0:19:48.16:0,48,896	1/1:6,15:21:8.62:156,9,0	1/1:6,11:17:48.16:1081,48,0	./.	0/0:38,0:38:57.08:0,57,876	0/0:31,0:31:59.36:0,59,998	1/1:2,9:12:3.01:51,3,0	./.	1/1:5,11:14:12.04:296,12,0	0/0:19,0:19:18.06:0,18,359	1/1:0,5:5:9.03:248,9,0	1/1:4,6:10:30.10:664,30,0	0/1:2,9:12:0:0,0,0	0/1:2,5:7:0:0,0,0	0/0:23,0:23:27.06:0,27,326	0/0:27,0:27:41.63:0,42,621	0/0:38,0:38:45.15:0,45,729	./.	1/1:6,11:17:51.08:1042,51,0	1/1:7,7:14:21.07:490,21,0	1/1:1,5:6:15.05:393,15,0
chr10	60135563	.	CG	C	2783.16	PASS	AB=1.000;AC=33;AF=0.589;AN=56;BaseQRankSum=13.849;DP=494;FS=33.212;HRun=1;HaplotypeScore=194.0937;InbreedingCoeff=0.8635;MQ=68.96;MQ0=0;MQRankSum=-12.990;QD=12.54;ReadPosRankSum=-6.154;VQSLOD=-0.5691;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,13:13:12.44:31,12,0	0/0:9,0:9:27.06:0,27,405	0/1:23,0:18:3.98:4,0,623	0/0:13,0:10:21.03:0,21,291	1/1:0,7:7:6.22:16,6,0	0/0:24,0:24:42.14:0,42,670	0/0:32,0:32:59.85:0,60,909	0/0:20,0:19:54.18:0,54,839	1/1:0,22:22:23.48:112,23,0	1/1:0,18:18:54.18:745,54,0	1/1:0,7:7:4.66:12,5,0	0/0:33,0:33:63.08:0,63,997	0/0:32,0:32:72.22:0,72,1112	1/1:0,12:12:11.52:67,12,0	1/1:0,17:17:6.94:21,7,0	1/1:2,14:14:22.92:185,23,0	0/0:19,0:19:27.08:0,27,401	1/1:0,5:5:9.03:122,9,0	1/1:0,11:11:26.98:374,27,0	1/1:0,12:12:10.88:27,11,0	1/1:1,6:7:6.69:17,7,0	0/0:24,0:24:33.02:0,33,501	0/0:27,0:27:48.16:0,48,766	0/0:39,0:39:57.18:0,57,886	1/1:1,13:14:14.69:56,15,0	1/1:0,17:17:51.17:699,51,0	1/1:1,13:14:24.08:326,24,0	1/1:0,7:7:15.04:186,15,0
chr10	60135591	.	ATG	A	10019.60	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=14.120;DP=556;FS=0.680;HRun=0;HaplotypeScore=172.0352;InbreedingCoeff=0.9790;MQ=79.62;MQ0=0;MQRankSum=-16.431;QD=45.34;ReadPosRankSum=-2.288;VQSLOD=4.0989;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,10:10:24:391,24,0	0/0:12,0:12:36.12:0,36,731	0/0:27,0:27:74.06:0,74,1353	0/0:27,0:27:74.60:0,75,1274	1/1:0,15:14:36.12:582,36,0	0/0:23,0:23:60.21:0,60,1213	0/0:37,0:37:99:0,111,2229	0/0:25,0:25:75.26:0,75,1502	1/1:0,22:22:63.21:1012,63,0	1/1:0,17:17:48.16:782,48,0	1/1:0,12:12:36.12:586,36,0	0/0:36,0:36:90.31:0,90,1823	0/0:33,0:33:87.30:0,87,1767	1/1:0,16:16:45.15:733,45,0	1/1:0,26:25:75.26:1220,75,0	1/1:0,18:17:51.17:831,51,0	0/0:27,0:27:57.20:0,57,1157	1/1:1,3:4:9.03:131,9,0	1/1:0,10:10:30.10:489,30,0	1/1:0,13:13:36.08:542,36,0	1/1:0,6:6:11.88:181,12,0	0/0:24,0:24:63.22:0,63,1277	0/0:23,0:23:45.15:0,45,900	0/0:41,0:41:96.33:0,96,1944	1/1:0,15:15:45.15:730,45,0	1/1:0,20:20:60.20:978,60,0	1/1:0,14:14:42.14:684,42,0	1/1:0,3:3:9.03:147,9,0
chr10	60135668	.	AG	A	11241.95	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=13.448;DP=559;FS=64.024;HRun=2;HaplotypeScore=116.4754;InbreedingCoeff=0.9947;MQ=81.54;MQ0=0;MQRankSum=-9.643;QD=34.59;ReadPosRankSum=-0.748;VQSLOD=-0.5288;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,17:18:48.07:584,48,0	1/1:1,10:10:30.05:370,30,0	0/0:24,0:24:63.01:0,63,857	0/0:19,0:19:53.84:0,54,713	1/1:2,13:15:36.11:453,36,0	0/0:17,0:17:51.17:0,51,762	0/0:37,0:37:99:0,105,1518	1/1:3,22:24:72.23:924,72,0	1/1:1,9:10:30.10:379,30,0	1/1:1,32:33:96.31:1234,96,0	1/1:3,11:14:33.04:406,33,0	0/0:35,0:35:99:0,105,1563	0/0:31,0:31:87.27:0,87,1273	1/1:2,11:13:33:384,33,0	1/1:1,21:22:63.16:789,63,0	1/1:6,13:19:48:544,48,0	1/1:1,26:27:78.20:982,78,0	1/1:0,5:5:14.96:157,15,0	1/1:1,13:14:39.13:503,39,0	1/1:3,15:18:54.15:670,54,0	1/1:1,17:18:48.15:617,48,0	0/0:18,0:18:54.18:0,54,806	0/0:14,0:14:42.13:0,42,608	0/0:39,0:39:99:0,108,1593	1/1:1,15:16:48.08:586,48,0	1/1:3,21:24:69.15:862,69,0	1/1:1,16:17:48.12:602,48,0	1/1:1,5:6:15.05:195,15,0
chr10	60135714	.	AT	A	11503.35	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=9.651;DP=587;FS=34.814;HRun=2;HaplotypeScore=86.0165;InbreedingCoeff=0.9942;MQ=82.77;MQ0=0;MQRankSum=-10.028;QD=32.77;ReadPosRankSum=1.012;VQSLOD=2.5529;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,21:22:60.06:734,60,0	1/1:0,14:13:36.12:466,36,0	0/0:22,0:22:53.96:0,54,728	0/0:20,0:20:50.18:0,50,583	1/1:0,17:17:42.07:524,42,0	0/0:15,0:15:42.14:0,42,629	0/0:40,0:40:99:0,120,1746	1/1:1,26:27:81.23:1010,81,0	1/1:0,20:20:51.12:641,51,0	1/1:0,29:29:87.27:1113,87,0	1/1:1,6:7:15.05:194,15,0	0/0:43,0:43:99:0,126,1859	0/0:26,0:26:75.25:0,75,1104	1/1:1,12:13:36.05:445,36,0	1/1:1,25:26:69.22:890,69,0	1/1:0,21:21:51.17:660,51,0	1/1:1,25:26:69.22:893,69,0	1/1:0,7:7:21.07:272,21,0	1/1:5,8:13:30.03:355,30,0	1/1:0,23:23:57.05:697,57,0	1/1:2,20:22:56.86:651,57,0	0/0:25,0:25:72.24:0,72,1078	0/0:17,0:17:51.17:0,51,764	0/0:28,0:28:78.24:0,78,1129	1/1:1,18:19:45.15:583,45,0	1/1:2,20:22:63.12:768,63,0	1/1:1,14:15:33.05:413,33,0	1/1:1,7:8:15.05:195,15,0
chr10	60135843	.	G	GATTGTT	8198.93	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=2.499;DP=519;FS=8.898;HRun=0;HaplotypeScore=136.1948;InbreedingCoeff=0.9597;MQ=61.37;MQ0=5;MQRankSum=-2.254;QD=29.60;ReadPosRankSum=-2.325;VQSLOD=3.4150;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,0:17:30.07:513,30,0	0/0:8,0:8:18.06:0,18,360	0/0:30,0:18:23.18:0,23,807	0/0:27,0:16:45.59:0,46,865	1/1:10,0:10:5.97:57,6,0	0/0:14,0:14:30.10:0,30,633	0/0:15,0:15:17.73:0,18,361	0/0:23,0:23:63.21:0,63,1349	1/1:6,0:13:24.08:484,24,0	1/1:15,0:15:41.98:671,42,0	1/1:6,0:6:18.06:282,18,0	0/0:24,0:24:54.17:0,54,973	0/0:21,0:21:48.16:0,48,970	1/1:13,0:13:18.03:321,18,0	1/1:24,0:23:27.06:398,27,0	1/1:1,14:23:27.09:793,27,0	0/0:12,0:12:30.10:0,30,655	1/1:4,0:10:15.01:338,15,0	1/1:13,1:14:39.10:831,39,0	1/1:18,0:18:41.96:582,42,0	1/1:23,1:24:27.09:485,27,0	0/0:28,0:26:45.04:0,45,762	0/0:15,0:15:21.05:0,21,391	0/0:25,0:25:9.01:0,9,160	1/1:28,0:28:36.09:603,36,0	1/1:23,0:23:69.22:1359,69,0	1/1:2,17:23:8.91:132,9,0	1/1:16,0:16:21.07:351,21,0
chr10	60135844	.	A	ATTG	7533.32	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=5.055;DP=535;FS=8.847;HRun=0;HaplotypeScore=125.7139;InbreedingCoeff=0.8777;MQ=60.97;MQ0=6;MQRankSum=-1.568;QD=27.90;ReadPosRankSum=-1.078;VQSLOD=4.3044;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:16:6.58:184,7,0	0/0:8,0:8:18.06:0,18,237	0/0:30,0:18:30.36:0,30,613	0/0:27,0:16:45.48:0,45,613	1/1:10,0:10:5.80:56,6,0	0/0:14,0:14:30.10:0,30,422	0/0:15,0:15:17.68:0,18,243	0/0:22,0:22:63.21:0,63,974	1/1:12,0:12:23.93:220,24,0	1/1:4,14:19:42.60:802,43,0	1/1:0,6:7:18.06:347,18,0	0/0:25,0:25:54.02:0,54,647	0/0:21,0:21:48.15:0,48,667	1/1:2,13:15:21.07:419,21,0	1/1:2,22:24:27.09:540,27,0	0/1:22,0:22:13.59:225,0,14	0/0:12,0:12:30.10:0,30,445	1/1:9,0:9:12.87:132,13,0	1/1:6,10:16:39.09:618,39,0	1/1:2,16:19:45.06:722,45,0	1/1:4,22:26:29.77:603,30,0	0/0:28,0:26:45.02:0,45,524	0/0:15,0:15:21.05:0,21,266	0/0:25,0:25:9.01:0,9,117	1/1:2,27:29:36.08:750,36,0	1/1:3,22:26:72.23:1433,72,0	0/0:23,0:23:8.54:0,9,45	1/1:0,16:18:21.07:483,21,0
chr10	60135846	.	TATCATCATCATCATCATCATC	T	4982.77	PASS	AB=0.761;AC=15;AF=0.268;AN=56;BaseQRankSum=6.876;DP=520;FS=0.000;HRun=0;HaplotypeScore=235.9505;InbreedingCoeff=0.6505;MQ=60.00;MQ0=7;MQRankSum=-3.235;QD=31.34;ReadPosRankSum=2.390;VQSLOD=3.4116;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:4.09:0,4,454	0/1:5,0:7:58.57:79,0,59	0/0:29,0:17:20.98:0,21,675	0/0:27,0:16:21.06:0,21,571	0/0:1,0:12:3.01:0,3,139	1/1:8,6:14:15.05:776,15,0	1/1:10,5:15:2.46:17,2,0	0/0:21,0:21:24.07:0,24,517	0/0:13,0:13:3.69:0,4,514	0/0:17,0:17:36.12:0,36,2790	0/0:8,0:8:18.06:0,18,1432	1/1:10,15:25:27.09:1506,27,0	1/1:13,8:21:15.05:837,15,0	0/0:15,0:15:24.08:0,24,1902	0/0:21,0:20:24.08:0,24,1941	0/0:22,0:22:30.10:0,30,2609	0/1:10,0:12:17.25:17,0,146	0/0:8,0:8:15.05:0,15,785	0/0:15,0:13:20.27:0,20,1049	0/0:18,0:18:33.11:0,33,2688	0/0:25,0:25:29.53:0,30,2448	1/1:10,17:25:32.96:1396,33,0	1/1:5,9:14:8.99:354,9,0	0/1:11,13:24:0:0,0,0	0/0:26,0:26:45.15:0,45,3416	0/0:27,0:27:63.22:0,63,4912	0/0:22,0:22:12.04:0,12,1100	0/0:18,0:18:21.07:0,21,1656
chr10	60135977	.	AG	A	1646.28	PASS	AB=1.000;AC=20;AF=0.357;AN=56;BaseQRankSum=-6.584;DP=434;FS=0.846;HRun=2;HaplotypeScore=97.7998;InbreedingCoeff=0.8060;MQ=69.25;MQ0=0;MQRankSum=0.118;QD=8.76;ReadPosRankSum=1.104;VQSLOD=1.2327;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:62.90:0,63,529	1/1:0,8:8:24.05:240,24,0	0/0:5,0:5:12.04:0,12,163	0/1:11,0:9:2.87:3,0,161	0/0:14,0:14:35.90:0,36,297	1/1:11,0:11:22.52:72,23,0	1/1:18,0:18:18.27:52,18,0	1/1:6,19:25:48.09:474,48,0	0/0:6,0:6:12:0,12,109	0/0:19,0:19:38.62:0,39,297	0/0:10,0:10:26.93:0,27,217	1/1:19,0:19:12.84:84,13,0	1/1:13,0:13:1.96:43,2,0	0/0:12,0:12:32.97:0,33,292	0/0:20,0:20:47.80:0,48,375	0/0:9,0:9:23.92:0,24,203	1/1:4,24:28:69.14:689,69,0	0/0:24,0:24:59.79:0,60,482	0/0:9,0:9:17.81:0,18,128	0/0:14,0:14:32.98:0,33,304	0/0:21,0:21:56.74:0,57,448	1/1:12,0:12:22.17:67,22,0	0/1:15,0:15:24.03:31,0,24	1/1:28,0:28:7.02:96,7,0	0/0:16,0:16:32.89:0,33,265	0/0:22,0:22:50.42:0,50,378	0/0:15,0:15:41.94:0,42,361	0/0:6,0:6:17.98:0,18,154
chr10	60135979	.	GC	G	4214.01	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-11.829;DP=432;FS=0.402;HRun=7;HaplotypeScore=88.7565;InbreedingCoeff=0.9849;MQ=67.68;MQ0=0;MQRankSum=1.026;QD=23.41;ReadPosRankSum=1.609;VQSLOD=4.8280;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:63.20:0,63,781	1/1:8,0:8:24.05:240,24,0	0/0:4,0:4:12.04:0,12,145	0/0:11,0:9:14.79:0,15,175	0/0:14,0:14:36.11:0,36,448	1/1:0,11:11:33.08:337,33,0	1/1:0,18:18:30.07:306,30,0	1/1:25,0:25:48.06:474,48,0	0/0:5,0:5:12.04:0,12,150	0/0:18,0:18:45.12:0,45,531	0/0:10,0:10:27.08:0,27,323	1/1:1,18:19:51.11:518,51,0	1/1:2,12:14:33.07:336,33,0	0/0:12,0:12:36.07:0,36,424	0/0:19,0:19:51.11:0,51,605	0/0:9,0:9:24.08:0,24,299	1/1:29,0:29:69.13:689,69,0	0/0:24,0:24:60.16:0,60,731	0/0:9,0:9:18.05:0,18,212	0/0:15,0:15:33.09:0,33,400	0/0:24,0:24:69.11:0,69,783	1/1:0,13:13:33.08:337,33,0	1/1:2,13:15:33.07:336,33,0	1/1:1,27:28:63.14:642,63,0	0/0:16,0:16:33.10:0,33,411	0/0:19,0:19:51.16:0,51,632	0/0:14,0:14:42.12:0,42,511	0/0:6,0:6:18.06:0,18,221
chr10	60136331	.	G	GA	9330.60	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=-13.453;DP=589;FS=3.798;HRun=8;HaplotypeScore=61.0993;InbreedingCoeff=0.9629;MQ=72.41;MQ0=7;MQRankSum=-2.307;QD=27.85;ReadPosRankSum=1.983;VQSLOD=5.5531;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,23:27:60.18:691,60,0	0/0:7,0:7:19.18:0,19,91	0/0:16,0:16:32.93:0,33,293	0/0:16,0:16:22.65:0,23,220	1/1:7,31:38:62.66:939,63,0	0/0:27,0:27:75.04:0,75,686	0/0:13,0:13:33.02:0,33,302	0/0:37,0:37:0.37:0,0,243	1/1:4,24:27:72.20:823,72,0	1/1:1,20:21:60.18:692,60,0	1/1:4,10:14:30.05:329,30,0	0/0:31,0:31:84.04:0,84,769	0/0:26,0:26:72.03:0,72,658	1/1:2,14:15:36.09:405,36,0	1/1:2,24:25:66.20:762,66,0	1/1:2,19:20:51.15:589,51,0	0/0:24,0:24:62.56:0,63,328	1/1:0,9:9:27.08:312,27,0	1/1:5,20:25:60.09:661,60,0	1/1:0,19:19:51.11:574,51,0	1/1:2,10:12:30.09:346,30,0	0/0:12,0:12:30:0,30,270	0/0:25,0:25:72:0,72,651	0/0:20,0:20:54.03:0,54,494	1/1:2,17:19:45.17:549,45,0	1/1:3,19:22:57.17:656,57,0	1/1:1,23:22:63.19:726,63,0	1/1:1,11:11:24.07:277,24,0
chr10	60137713	.	GA	G	16786.80	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=15.891;DP=687;FS=6.433;HRun=3;HaplotypeScore=92.1028;InbreedingCoeff=0.9988;MQ=83.31;MQ0=0;MQRankSum=-4.975;QD=38.95;ReadPosRankSum=5.331;VQSLOD=4.1185;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,52:52:99:1930,138,0	0/0:11,0:11:33.11:0,33,515	0/0:23,0:23:68.42:0,68,1018	0/0:19,0:19:45.09:0,45,637	1/1:0,19:19:51.17:713,51,0	0/0:21,0:21:63.21:0,63,1000	0/0:25,0:25:75.23:0,75,1169	0/0:35,0:35:99:0,102,1629	1/1:0,23:23:63.21:880,63,0	1/1:0,26:26:78.26:1081,78,0	1/1:0,25:25:75.25:1048,75,0	0/0:24,0:24:72.25:0,72,1148	0/0:19,0:19:57.19:0,57,908	1/1:0,29:29:84.28:1167,84,0	1/1:0,33:33:96.32:1342,96,0	1/1:0,29:29:78.26:1090,78,0	0/0:20,0:20:60.20:0,60,959	1/1:1,20:21:54.18:755,54,0	1/1:0,15:15:45.15:623,45,0	1/1:0,23:23:60.20:839,60,0	1/1:0,60:60:99:2349,169,0	0/0:15,0:15:45.14:0,45,693	0/0:17,0:17:48.16:0,48,767	0/0:27,0:27:81.28:0,81,1292	1/1:0,14:14:39.13:546,39,0	1/1:0,29:29:87.29:1213,87,0	1/1:0,26:26:69.23:961,69,0	1/1:0,7:7:18.06:252,18,0
chr10	60137910	.	T	TGG	8059.72	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=20.037;DP=634;FS=2.537;HRun=1;HaplotypeScore=174.8493;InbreedingCoeff=0.9982;MQ=87.13;MQ0=0;MQRankSum=-19.235;QD=23.77;ReadPosRankSum=0.516;VQSLOD=3.4781;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,30:40:99:1020,99,0	0/0:13,0:13:39.13:0,39,597	0/0:31,0:31:87.30:0,87,1327	0/0:26,0:26:69.23:0,69,1013	1/1:10,23:33:43.94:610,44,0	0/0:18,0:18:51.16:0,51,759	0/0:28,0:28:84.29:0,84,1284	0/0:30,0:30:90.28:0,90,1323	1/1:4,14:18:45.05:459,45,0	1/1:1,15:16:42.04:434,42,0	1/1:1,14:15:44.15:358,44,0	0/0:21,0:21:63.21:0,63,964	0/0:19,0:19:57.16:0,57,848	1/1:6,10:16:23.34:252,23,0	1/1:8,25:33:83.99:781,84,0	1/1:4,11:16:34.97:352,35,0	0/0:31,0:31:90.31:0,90,1378	1/1:1,9:10:24.05:257,24,0	1/1:4,12:18:39.72:436,40,0	1/1:6,27:33:89.14:839,89,0	1/1:5,20:25:55.97:552,56,0	0/0:20,0:20:54.18:0,54,825	0/0:28,0:28:84.27:0,84,1264	0/0:30,0:30:90.31:0,90,1373	1/1:4,10:14:39.04:372,39,0	1/1:6,16:22:49.84:539,50,0	1/1:5,19:24:56.88:628,57,0	1/1:0,6:6:18.02:171,18,0
chr10	60137913	.	ACC	A	3962.51	PASS	AB=0.545;AC=31;AF=0.554;AN=56;BaseQRankSum=19.342;DP=581;FS=3.614;HRun=3;HaplotypeScore=166.4503;InbreedingCoeff=0.9352;MQ=90.36;MQ0=0;MQRankSum=-18.036;QD=13.76;ReadPosRankSum=1.537;VQSLOD=0.6869;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,30:34:89.40:580,89,0	0/0:13,0:13:39.13:0,39,753	0/0:31,0:31:87.30:0,87,1668	0/0:26,0:26:72.20:0,72,1323	1/1:3,23:26:23.77:249,24,0	0/0:18,0:18:54.19:0,54,1043	0/0:27,0:27:81.28:0,81,1565	0/0:28,0:28:78.27:0,78,1499	1/1:0,14:14:34.62:188,35,0	1/1:0,15:15:37.59:249,38,0	1/1:1,14:15:37.31:181,37,0	0/0:21,0:21:63.22:0,63,1200	0/0:20,0:20:60.21:0,60,1149	0/1:2,10:12:7.45:53,0,7	1/1:2,25:27:68.56:376,69,0	1/1:3,12:15:18.40:183,18,0	0/0:31,0:31:90.31:0,90,1739	1/1:0,9:9:20.78:148,21,0	1/1:2,13:15:30.88:266,31,0	1/1:0,27:27:71.01:384,71,0	1/1:3,20:23:41.85:292,42,0	0/0:18,0:18:51.17:0,51,951	0/0:29,0:29:87.29:0,87,1648	0/0:31,0:31:90.31:0,90,1730	1/1:0,10:10:28.99:162,29,0	1/1:2,16:18:30.84:262,31,0	1/1:3,19:22:30.96:288,31,0	1/1:0,6:6:17.48:99,17,0
chr10	60138712	.	C	CTT	2153.30	PASS	AB=0.972;AC=46;AF=0.821;AN=56;BaseQRankSum=-0.773;DP=354;FS=1.370;HRun=15;HaplotypeScore=86.8175;InbreedingCoeff=0.2518;MQ=64.99;MQ0=2;MQRankSum=-0.603;QD=6.69;ReadPosRankSum=0.302;VQSLOD=0.6612;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:7,0:6:0:1,0,0	1/1:2,0:2:3:27,3,0	0/1:22,0:16:15.01:15,0,36	0/0:15,0:11:5.68:0,6,47	1/1:19,0:19:17.79:138,18,0	1/1:1,15:16:12.04:152,12,0	1/1:6,12:17:14.99:171,15,0	1/1:9,1:26:0.84:149,1,0	1/1:7,0:7:8.64:49,9,0	1/1:14,0:14:6.47:56,6,0	1/1:12,0:12:15.90:104,16,0	1/1:12,0:11:18.37:138,18,0	1/1:8,0:8:18:166,18,0	1/1:11,0:10:11.94:95,12,0	1/1:7,0:6:11.28:77,11,0	1/1:12,0:12:15.01:137,15,0	0/1:7,0:8:12.22:38,0,12	0/0:3,0:3:1.04:0,1,2	1/1:11,0:9:8.85:59,9,0	1/1:16,0:15:8.96:71,9,0	1/1:7,0:7:5.99:51,6,0	1/1:5,14:20:23.65:208,24,0	1/1:7,4:11:11.78:90,12,0	1/1:14,0:14:22.70:167,23,0	1/1:15,0:15:2.98:24,3,0	0/0:14,0:14:0.82:0,1,9	0/1:18,0:18:7.41:90,0,7	1/1:6,0:6:1.55:5,2,0
chr10	60138716	.	T	TC	1527.71	PASS	AB=0.928;AC=20;AF=0.357;AN=56;BaseQRankSum=5.417;DP=346;FS=2.856;HRun=0;HaplotypeScore=78.0136;InbreedingCoeff=0.0776;MQ=60.80;MQ0=2;MQRankSum=-4.050;QD=8.63;ReadPosRankSum=3.829;VQSLOD=3.8032;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:7,0:6:20.98:21,0,28	0/0:3,0:3:8.99:0,9,77	0/0:26,0:16:20.90:0,21,239	0/0:13,0:9:8.63:0,9,164	1/1:17,1:19:16.19:244,16,0	0/0:16,0:16:14.84:0,15,104	0/0:15,0:14:24.29:0,24,181	0/0:25,0:25:42.45:0,42,335	0/1:8,0:8:23.93:66,0,24	1/1:12,0:12:5.37:131,5,0	0/1:10,2:12:17.45:79,0,17	0/0:12,0:11:24.26:0,24,167	0/0:7,0:7:16.39:0,16,124	0/1:8,3:10:10.07:127,0,10	0/1:5,2:6:17.15:54,0,17	1/1:9,3:12:9.61:87,10,0	0/0:8,0:8:14.75:0,15,121	0/1:3,0:3:16.78:17,0,24	0/1:11,0:9:42.49:81,0,42	0/1:15,1:15:35.91:119,0,36	0/1:5,2:7:5.43:50,0,5	0/0:19,0:19:51.88:0,52,360	0/0:9,0:9:20.82:0,21,154	0/0:16,0:14:28.72:0,29,195	1/1:13,0:13:38.35:259,38,0	0/1:15,0:15:65.03:124,0,65	0/1:17,0:17:47.74:156,0,48	0/1:7,0:7:3.92:92,0,4
chr10	60138727	.	T	TTC	1895.82	PASS	AB=1.000;AC=44;AF=0.786;AN=56;BaseQRankSum=3.547;DP=296;FS=4.595;HRun=0;HaplotypeScore=84.3827;InbreedingCoeff=0.2503;MQ=59.36;MQ0=4;MQRankSum=-3.756;QD=7.74;ReadPosRankSum=-0.069;VQSLOD=2.6326;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,1:5:8.52:42,9,0	0/0:3,0:3:3.07:0,3,46	0/0:23,0:11:3.17:0,3,107	0/0:25,0:11:6.78:0,7,40	1/1:2,2:8:19.75:173,20,0	0/1:12,0:12:12.12:50,0,12	1/1:11,0:10:14.04:69,14,0	0/1:23,0:23:86.82:87,0,260	1/1:8,1:10:12.76:140,13,0	1/1:10,0:10:16.98:106,17,0	1/1:8,0:12:12.98:76,13,0	1/1:8,0:7:14.56:82,15,0	0/1:8,0:8:10.05:50,0,10	1/1:9,2:11:22.51:153,23,0	1/1:11,1:12:23.10:167,23,0	1/1:4,1:11:23.77:243,24,0	0/1:9,0:9:4.60:5,0,106	1/1:4,0:4:5.70:29,6,0	1/1:7,0:5:5.48:24,5,0	1/1:4,3:8:8.25:55,8,0	1/1:0,4:6:6.02:70,6,0	0/1:14,0:14:38.88:45,0,39	0/1:11,0:11:1.20:1,0,39	1/1:17,0:15:9.26:38,9,0	1/1:3,0:3:8.47:49,8,0	1/1:5,0:6:11.99:66,12,0	1/1:7,2:12:19.67:204,20,0	1/1:1,0:2:5.14:25,5,0
chr10	60138760	.	GGA	G	282.40	PASS	AB=0.921;AC=17;AF=0.304;AN=56;BaseQRankSum=0.826;DP=372;FS=20.390;HRun=0;HaplotypeScore=89.8189;InbreedingCoeff=-0.0604;MQ=42.92;MQ0=36;MQRankSum=-1.535;QD=2.00;ReadPosRankSum=-2.090;VQSLOD=0.0753;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:13:2.73:41,3,0	0/0:5,0:5:14.97:0,15,192	0/0:43,0:6:7.60:0,8,161	0/0:57,0:8:10.74:0,11,57	0/0:8,0:8:10.27:0,10,77	0/1:10,2:12:80.28:80,0,146	0/0:5,5:9:6.02:0,6,75	0/0:24,0:23:66.07:0,66,1088	0/1:10,0:9:14.65:49,0,15	0/1:13,0:13:10.66:11,0,58	0/1:5,1:6:0.78:4,0,1	0/1:8,1:8:8.62:38,0,9	0/1:5,3:7:38.85:43,0,39	0/0:13,0:13:10.20:0,10,58	0/1:12,0:13:29.26:36,0,29	0/0:12,0:12:8.55:0,9,103	0/0:9,0:8:11.97:0,12,164	0/1:4,0:4:17.19:17,0,18	1/1:9,1:10:4.67:43,5,0	0/0:6,0:6:3.42:0,3,30	0/0:5,0:3:2.03:0,2,5	0/1:11,1:12:27.03:27,0,165	0/0:9,1:10:14.91:0,15,190	0/0:18,2:17:3.01:0,3,51	1/1:7,1:8:0.85:1,1,0	0/1:13,0:12:13.19:13,0,36	0/0:8,0:8:9.69:0,10,61	0/1:5,1:6:16.85:27,0,17
chr10	60138762	.	A	AAGAGAGAG	1277.82	PASS	AB=0.971;AC=35;AF=0.795;AN=44;BaseQRankSum=-1.980;DP=400;FS=3.388;HRun=0;HaplotypeScore=123.9750;InbreedingCoeff=0.1412;MQ=42.39;MQ0=34;MQRankSum=-1.457;QD=5.37;ReadPosRankSum=-2.683;VQSLOD=1.9383;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:14:4.99:36,5,0	0/1:5,0:6:15:15,0,78	./.	./.	0/0:10,0:10:1.71:0,2,79	1/1:13,0:13:15.05:222,15,0	./.	1/1:32,0:31:15.83:94,16,0	1/1:10,0:9:9.94:82,10,0	1/1:13,0:13:13.63:105,14,0	./.	1/1:11,0:10:15.03:250,15,0	1/1:9,0:8:5.95:44,6,0	1/1:13,0:14:4.71:17,5,0	1/1:13,0:14:15.98:89,16,0	0/1:13,0:13:6.12:6,0,60	1/1:12,0:12:10.41:72,10,0	1/1:3,0:3:2.64:23,3,0	1/1:11,0:11:3.48:43,3,0	0/1:7,0:7:11.92:12,0,38	0/0:5,0:3:0.47:0,0,1	1/1:11,0:11:6.01:67,6,0	0/1:10,0:10:0:0,0,0	./.	./.	1/1:15,0:14:23.56:198,24,0	1/1:9,0:9:3.46:10,3,0	0/1:6,0:6:8.38:8,0,17
chr10	60138768	.	G	GAA	2704.43	PASS	AB=0.942;AC=33;AF=0.589;AN=56;BaseQRankSum=8.476;DP=421;FS=0.000;HRun=1;HaplotypeScore=98.9956;InbreedingCoeff=0.4330;MQ=42.35;MQ0=38;MQRankSum=-4.515;QD=9.52;ReadPosRankSum=0.326;VQSLOD=0.1482;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:12:11.37:67,11,0	0/1:7,0:7:10.58:11,0,62	0/1:40,0:6:7.25:7,0,59	0/1:55,0:8:4.53:5,0,21	1/1:8,3:10:18.43:147,18,0	0/1:14,0:13:2.45:2,0,49	0/0:13,0:10:2.94:0,3,18	0/0:37,0:36:98.31:0,98,785	1/1:6,5:10:28.78:300,29,0	1/1:13,2:14:8.94:260,9,0	1/1:4,2:6:8.53:50,9,0	0/0:11,0:10:10.83:0,11,93	0/0:11,0:10:10.52:0,11,74	1/1:13,2:15:37.65:290,38,0	1/1:7,8:14:32.28:390,32,0	1/1:8,6:14:33.33:345,33,0	0/0:17,0:15:10.95:0,11,179	1/1:3,0:3:8.50:76,8,0	0/1:7,1:7:12.71:13,0,19	0/1:7,2:9:2.31:94,0,2	1/1:5,0:3:1.55:4,2,0	0/0:12,0:12:7.81:0,8,55	0/0:12,0:12:5.78:0,6,49	0/0:24,0:21:2.77:0,3,25	1/1:8,1:9:14.70:79,15,0	1/1:11,5:15:32.36:407,32,0	1/1:7,3:10:28.08:242,28,0	0/1:7,1:8:13.47:101,0,13
chr10	60138802	.	A	ATG	5471.63	PASS	AC=30;AF=0.600;AN=50;BaseQRankSum=7.732;DP=371;FS=13.090;HRun=0;HaplotypeScore=91.6056;InbreedingCoeff=0.9406;MQ=36.17;MQ0=37;MQRankSum=-5.473;QD=32.38;ReadPosRankSum=1.588;VQSLOD=6.2101;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,3:6:5.97:92,6,0	0/0:5,0:5:11.96:0,12,141	./.	./.	1/1:5,8:12:21.07:393,21,0	0/0:23,0:22:48.05:0,48,687	0/0:22,0:18:36.06:0,36,494	0/0:33,0:28:75.13:0,75,1097	1/1:3,6:8:18.06:323,18,0	1/1:6,13:16:36.10:640,36,0	1/1:3,4:5:6.02:101,6,0	0/0:16,0:15:33.11:0,33,511	0/0:16,0:15:30.54:0,31,437	1/1:5,5:10:18.06:324,18,0	1/1:6,9:14:18.62:437,19,0	1/1:6,8:14:26.88:518,27,0	0/0:20,0:18:38:0,38,497	1/1:1,2:3:9.02:127,9,0	1/1:6,7:11:20.81:321,21,0	1/1:8,7:14:13.86:474,14,0	./.	0/0:19,0:19:27.05:0,27,410	0/0:14,0:14:18.02:0,18,245	0/0:22,0:21:24.05:0,24,331	1/1:2,8:9:21.07:372,21,0	1/1:7,7:13:30.61:529,31,0	1/1:1,8:9:21.07:384,21,0	1/1:1,8:9:24.08:434,24,0
chr10	60138846	.	TGA	T	7740.40	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=14.004;DP=435;FS=0.000;HRun=0;HaplotypeScore=81.9940;InbreedingCoeff=0.9903;MQ=73.73;MQ0=5;MQRankSum=-10.444;QD=38.13;ReadPosRankSum=2.288;VQSLOD=7.0574;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,11:11:24.08:343,24,0	0/0:4,0:4:12.04:0,12,220	0/0:19,0:17:45.61:0,46,758	0/0:25,0:23:51.07:0,51,814	1/1:1,13:14:42.14:599,42,0	0/0:24,0:24:72.25:0,72,1320	0/0:27,0:26:72.25:0,72,1316	0/0:40,0:39:99:0,105,1819	1/1:0,6:6:18.06:257,18,0	1/1:0,11:11:30.10:429,30,0	1/1:1,6:7:15.05:214,15,0	0/0:21,0:20:54.09:0,54,884	0/0:15,0:15:42.13:0,42,733	1/1:0,10:10:30.10:428,30,0	1/1:2,17:19:48.16:671,48,0	1/1:0,11:11:27.09:386,27,0	0/0:21,0:21:60.21:0,60,1082	1/1:0,8:8:24.08:344,24,0	1/1:0,12:12:36.12:515,36,0	1/1:1,17:18:51.17:722,51,0	1/1:1,8:8:21.07:301,21,0	0/0:13,0:13:36.12:0,36,660	0/0:7,0:7:21.07:0,21,384	0/0:16,0:16:36.12:0,36,658	1/1:0,18:18:48.16:686,48,0	1/1:1,11:12:33.11:472,33,0	1/1:0,21:21:57.19:815,57,0	1/1:0,15:15:39.13:558,39,0
chr10	60139024	.	AGTTCT	A	11888.45	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=16.167;DP=536;FS=6.023;HRun=0;HaplotypeScore=124.1053;InbreedingCoeff=0.9607;MQ=87.15;MQ0=0;MQRankSum=-17.609;QD=47.18;ReadPosRankSum=4.847;VQSLOD=4.4862;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,22:26:54.19:1169,54,0	0/0:6,0:6:18.06:0,18,570	0/0:24,0:24:66.20:0,66,1931	0/0:22,0:22:60.19:0,60,1642	1/1:2,19:21:33.11:715,33,0	0/0:26,0:26:78.25:0,78,2302	0/0:27,0:27:78.27:0,78,2458	0/0:22,0:22:63.22:0,63,1975	1/1:1,17:18:39.13:846,39,0	1/1:1,12:13:27.09:586,27,0	1/1:4,8:12:12.04:260,12,0	0/0:20,0:20:60.21:0,60,1858	0/0:24,0:24:69.24:0,69,2120	1/1:2,14:16:36.12:781,36,0	1/1:0,18:18:51.18:1106,51,0	1/1:0,14:14:39.13:846,39,0	0/0:38,0:38:99:0,111,3411	1/1:3,9:12:18.06:391,18,0	1/1:2,16:18:48.16:1040,48,0	1/1:1,12:13:27.09:570,27,0	1/1:2,9:11:8.89:195,9,0	0/0:33,0:33:93.32:0,93,2794	0/0:22,0:22:57.20:0,57,1523	0/0:20,0:20:60.21:0,60,1856	1/1:0,15:15:42.14:911,42,0	1/1:0,18:18:51.18:1107,51,0	1/1:0,26:26:59.69:1301,60,0	1/1:0,1:1:3.01:65,3,0
chr10	60145724	.	AAAACC	A	19156.85	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-3.074;DP=674;FS=10.917;HRun=0;HaplotypeScore=144.4900;InbreedingCoeff=0.9762;MQ=71.82;MQ0=4;MQRankSum=-1.615;QD=31.72;ReadPosRankSum=5.092;VQSLOD=4.2152;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,16:22:28.65:507,29,0	1/1:0,9:9:21.07:373,21,0	0/0:33,0:20:18.92:0,19,386	0/0:37,0:25:15.94:0,16,315	1/1:9,22:31:66:904,66,0	1/1:6,19:25:48.08:876,48,0	1/1:3,18:21:33.11:597,33,0	1/1:8,22:30:63.18:1031,63,0	1/1:4,13:17:30.10:559,30,0	1/1:5,28:33:81.22:1237,81,0	1/1:5,19:23:47.94:711,48,0	1/1:5,16:21:24.08:447,24,0	1/1:4,21:25:41.50:781,41,0	1/1:6,14:20:32.79:614,33,0	1/1:3,15:18:33.11:614,33,0	1/1:5,20:25:36.04:653,36,0	1/1:6,25:31:51.17:949,51,0	1/1:2,18:20:48.16:876,48,0	1/1:8,15:23:44.99:565,45,0	1/1:4,19:23:54.04:846,54,0	1/1:6,13:19:15.05:279,15,0	1/1:4,15:19:45.02:743,45,0	1/1:6,15:21:29.96:555,30,0	1/1:7,17:24:44.22:763,44,0	1/1:6,25:31:54.19:1005,54,0	1/1:4,24:28:69.18:1095,69,0	1/1:5,30:34:65.73:1130,66,0	1/1:0,9:9:24.08:447,24,0
chr10	60150545	.	TC	T	1403.75	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=10.341;DP=664;FS=1.884;HRun=1;HaplotypeScore=72.4589;InbreedingCoeff=0.9946;MQ=76.45;MQ0=0;MQRankSum=-0.943;QD=31.19;ReadPosRankSum=-2.471;VQSLOD=2.7811;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:72.25:0,72,1150	1/1:0,7:7:18.06:221,18,0	0/0:15,0:15:38.99:0,39,556	0/0:17,0:17:18.73:0,19,471	0/0:24,0:24:72.23:0,72,1126	0/0:25,0:25:75.26:0,75,1199	0/0:22,0:22:66.22:0,66,1050	1/1:1,24:25:72.67:861,73,0	0/0:31,0:31:93.30:0,93,1456	0/0:33,0:33:99:0,99,1563	0/0:20,0:20:57.19:0,57,910	0/0:27,0:27:81.26:0,81,1272	0/0:35,0:35:99:0,99,1555	0/0:25,0:25:72.23:0,72,1128	0/0:29,0:29:84.27:0,84,1317	0/0:18,0:18:54.18:0,54,863	1/1:0,13:13:39.12:463,39,0	0/0:20,0:20:60.12:0,60,888	0/0:18,0:18:54.18:0,54,864	0/0:26,0:26:78.25:0,78,1221	0/0:20,0:20:60.20:0,60,959	0/0:21,0:21:63.17:0,63,921	0/0:25,0:25:72.25:0,72,1151	0/0:32,0:31:91.15:0,91,1413	0/0:21,0:21:63.21:0,63,1007	0/0:35,0:35:99:0,105,1633	0/0:42,0:42:99:0,120,1911	0/0:14,0:14:39.13:0,39,617
chr10	60154169	.	C	CA	15398.32	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=-17.218;DP=757;FS=1.577;HRun=4;HaplotypeScore=77.6637;InbreedingCoeff=0.9999;MQ=71.65;MQ0=3;MQRankSum=-0.122;QD=37.37;ReadPosRankSum=5.046;VQSLOD=4.2922;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,45:48:99:1679,120,0	0/0:13,0:13:39.12:0,39,467	0/0:44,1:31:72.92:0,73,726	0/0:45,1:34:56.96:0,57,650	1/1:0,32:32:90.21:1216,90,0	0/0:21,0:21:60.18:0,60,718	0/0:25,0:25:75.23:0,75,899	0/0:34,0:34:90.27:0,90,1079	1/1:1,15:16:39.13:546,39,0	1/1:3,37:40:99:1541,111,0	1/1:0,26:26:72.24:990,72,0	0/0:22,0:22:66.20:0,66,787	0/0:23,0:23:66.19:0,66,779	1/1:0,25:25:72.24:1008,72,0	1/1:0,21:21:54.18:756,54,0	1/1:1,20:21:57.19:798,57,0	0/0:36,0:36:99:0,105,1255	1/1:0,33:33:87.29:1215,87,0	1/1:1,12:13:36.09:477,36,0	1/1:0,22:22:63.21:856,63,0	1/1:1,21:22:60.20:840,60,0	0/0:31,0:31:90.23:0,90,1043	0/0:29,0:29:81.25:0,81,969	0/0:19,0:19:54.16:0,54,648	1/1:0,23:22:66.22:924,66,0	1/1:1,22:23:33.22:884,33,0	1/1:2,25:24:75.25:1041,75,0	1/1:2,18:20:43.17:627,43,0
chr10	60155919	.	AGTGTGT	A	1611.42	PASS	AB=0.744;AC=17;AF=0.327;AN=52;BaseQRankSum=0.946;DP=721;FS=4.203;HRun=0;HaplotypeScore=197.2499;InbreedingCoeff=0.7188;MQ=65.21;MQ0=11;MQRankSum=-8.944;QD=7.98;ReadPosRankSum=1.362;VQSLOD=2.1391;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:49:53.99:0,54,1160	1/1:6,0:10:3.01:42,3,0	0/0:32,0:23:3.01:0,3,43	./.	0/0:8,0:18:14.24:0,14,361	1/1:14,7:22:20.92:278,21,0	1/1:13,10:24:6.02:101,6,0	./.	0/0:26,0:30:36.11:0,36,745	0/0:24,0:25:33.11:0,33,641	0/0:7,0:9:12.03:0,12,219	1/1:10,15:25:26.83:280,27,0	1/1:15,18:35:42.80:941,43,0	0/0:29,0:30:32.62:0,33,723	0/0:25,0:34:34.82:0,35,623	0/0:27,0:39:56.86:0,57,1334	1/1:11,0:21:0.74:2,1,0	0/0:33,0:36:57.15:0,57,1459	0/0:15,0:14:5.81:0,6,69	0/0:8,0:10:15.05:0,15,318	0/0:49,0:47:47.44:0,47,1012	1/1:8,4:12:2.97:20,3,0	1/1:12,7:19:6.01:64,6,0	0/1:21,11:32:19.04:55,0,19	0/0:12,0:14:21.07:0,21,390	0/0:25,0:26:49.72:0,50,919	0/0:20,0:20:30.05:0,30,583	0/0:10,0:13:24.06:0,24,469
chr10	60156030	.	ATG	A	15868.43	PASS	AB=0.572;AC=30;AF=0.577;AN=52;BaseQRankSum=14.603;DP=927;FS=7.645;HRun=0;HaplotypeScore=140.2067;InbreedingCoeff=0.8472;MQ=52.40;MQ0=102;MQRankSum=1.395;QD=30.69;ReadPosRankSum=5.114;VQSLOD=6.8408;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,25:29:35.08:804,35,0	0/0:12,0:12:36.12:0,36,619	./.	./.	1/1:0,26:26:66.22:879,66,0	0/0:33,0:32:79.50:0,79,1312	0/0:29,0:21:56.81:0,57,967	0/0:31,0:11:30.06:0,30,442	1/1:1,26:26:57.19:759,57,0	1/1:9,32:37:99:1305,99,0	1/1:1,15:16:36.12:479,36,0	0/0:35,0:35:96.33:0,96,1652	0/0:45,0:45:99:0,117,2008	0/1:5,20:25:28.01:622,0,28	1/1:3,33:35:85.52:1155,86,0	1/1:1,48:48:99:1598,120,0	0/0:35,0:34:89.73:0,90,1451	1/1:1,31:32:78.26:1039,78,0	0/1:6,14:13:11.81:403,0,12	1/1:1,24:25:55.42:756,55,0	1/1:8,73:75:99:2236,169,0	0/0:26,0:26:75.26:0,75,1267	0/0:21,0:21:60.17:0,60,984	0/0:47,0:47:99:0,104,1688	1/1:3,27:30:77.06:1003,77,0	1/1:1,30:31:90.30:1196,90,0	1/1:3,26:29:73.48:996,73,0	1/1:0,20:20:48.16:639,48,0
chr10	60156178	.	TA	T	9493.51	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=12.810;DP=710;FS=26.177;HRun=9;HaplotypeScore=73.3063;InbreedingCoeff=0.9962;MQ=74.92;MQ0=0;MQRankSum=-1.618;QD=22.99;ReadPosRankSum=4.444;VQSLOD=3.5902;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,40:44:90.04:823,90,0	0/0:8,0:8:21.06:0,21,235	0/0:27,0:26:20.04:0,20,429	0/0:9,0:9:14.97:0,15,149	1/1:2,32:34:93.01:843,93,0	0/0:26,0:26:66.20:0,66,762	0/0:19,0:19:48.13:0,48,545	0/0:39,0:39:99:0,102,1135	1/1:1,21:23:57.03:522,57,0	1/1:5,30:35:90.03:817,90,0	1/1:0,27:27:75.03:686,75,0	0/0:30,0:30:87.24:0,87,987	0/0:33,0:33:78.21:0,78,883	1/1:1,21:22:57.03:522,57,0	1/1:2,29:31:78.04:714,78,0	1/1:4,31:35:84.04:769,84,0	0/0:35,0:36:99:0,102,1157	1/1:0,11:11:33.02:302,33,0	1/1:0,20:20:60.02:545,60,0	1/1:3,21:24:57.03:521,57,0	1/1:2,14:16:33.02:302,33,0	0/0:22,0:22:62.16:0,62,683	0/0:25,0:25:63.14:0,63,705	0/0:22,0:22:63.19:0,63,727	1/1:1,22:23:63.03:576,63,0	1/1:3,25:28:75.02:682,75,0	1/1:3,26:28:69:624,69,0	1/1:2,9:11:27:247,27,0
chr10	60160763	.	GC	G	923.07	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.597;DP=666;FS=0.000;HRun=1;HaplotypeScore=62.2466;InbreedingCoeff=0.9949;MQ=90.09;MQ0=0;MQRankSum=0.090;QD=36.92;ReadPosRankSum=-3.770;VQSLOD=2.4925;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,129,2053	0/0:9,0:9:27.08:0,27,408	0/0:34,0:34:95.43:0,95,1445	0/0:30,0:30:81.27:0,81,1208	0/0:24,0:24:72.25:0,72,1145	0/0:23,0:23:69.17:0,69,1004	0/0:28,0:28:84.23:0,84,1244	1/1:0,25:25:75.24:1018,75,0	0/0:26,0:26:78.22:0,78,1192	0/0:21,0:21:63.20:0,63,960	0/0:21,0:21:63.21:0,63,1003	0/0:20,0:20:60.19:0,60,935	0/0:25,0:25:72.16:0,72,1028	0/0:21,0:21:60.17:0,60,897	0/0:23,0:23:69.22:0,69,1079	0/0:20,0:20:60.19:0,60,935	0/0:29,0:29:84.25:0,84,1286	0/0:36,0:36:99:0,105,1602	0/0:31,0:31:93.28:0,93,1396	0/0:21,0:21:63.18:0,63,958	0/0:23,0:23:69.17:0,69,1024	0/0:25,0:25:75.26:0,75,1180	0/0:22,0:22:66.22:0,66,1044	0/0:18,0:18:54.12:0,54,810	0/0:14,0:14:42.13:0,42,643	0/0:22,0:22:66.22:0,66,1033	0/0:25,0:25:75.24:0,75,1169	0/0:7,0:7:20.98:0,21,274
chr10	60162789	.	AGGCATTT	A	22803.96	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=20.257;DP=830;FS=3.047;HRun=0;HaplotypeScore=210.3766;InbreedingCoeff=0.9999;MQ=81.27;MQ0=0;MQRankSum=-20.329;QD=59.23;ReadPosRankSum=0.896;VQSLOD=5.0325;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:9,44:53:99:2633,102,0	0/0:13,0:13:39.13:0,39,1551	0/0:34,0:34:99:0,99,3360	0/0:25,0:25:66.23:0,66,2498	1/1:3,24:28:51.17:1266,51,0	1/1:0,23:23:63.22:1639,63,0	1/1:0,32:32:87.30:2272,87,0	1/1:3,37:40:99:2830,111,0	1/1:3,33:36:93.32:2498,93,0	0/0:31,0:31:90.31:0,90,3652	0/0:26,0:26:75.26:0,75,2970	1/1:2,41:43:99:2794,105,0	1/1:2,25:27:69.24:1859,69,0	0/0:23,0:23:69.24:0,69,2709	0/0:44,0:43:99:0,132,5146	0/0:37,0:37:99:0,111,4426	0/0:24,0:24:72.20:0,72,2670	1/1:1,20:21:57.20:1536,57,0	0/0:21,0:21:63.22:0,63,2491	0/0:31,0:31:90.31:0,90,3588	0/0:47,0:47:99:0,135,5325	1/1:5,27:32:69.24:1701,69,0	1/1:4,17:21:39.13:1016,39,0	1/1:5,24:29:33.38:760,33,0	0/0:20,0:19:57.20:0,57,2307	0/0:23,0:23:69.24:0,69,2704	0/0:33,0:33:99:0,99,4021	0/0:13,0:13:39.13:0,39,1565
chr10	60163144	.	C	CTCTCTCTCTCTT	2793.70	PASS	AB=0.964;AC=29;AF=0.558;AN=52;BaseQRankSum=-1.457;DP=559;FS=35.695;HRun=0;HaplotypeScore=194.9754;InbreedingCoeff=-0.1855;MQ=36.78;MQ0=30;MQRankSum=-2.836;QD=6.06;ReadPosRankSum=1.114;VQSLOD=1.4440;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:24,1:24:3.61:53,0,4	0/1:11,0:11:12.79:13,0,108	./.	./.	1/1:25,0:22:9.90:49,10,0	0/1:22,0:21:29.91:47,0,30	0/1:23,0:19:13.33:69,0,13	0/0:30,0:29:56.79:0,57,321	1/1:13,0:12:3.15:158,3,0	0/1:19,0:15:28.06:178,0,28	1/1:20,0:18:7.68:36,8,0	0/1:26,0:24:30.86:400,0,31	1/1:26,0:25:6.21:176,6,0	0/1:22,0:19:2.82:191,0,3	0/1:10,10:18:15.10:25,0,15	0/1:21,0:18:12.22:141,0,12	0/1:16,1:16:55.37:205,0,55	0/1:19,0:19:60.61:101,0,61	1/1:16,0:11:0.76:74,1,0	1/1:27,0:26:22.92:249,23,0	0/0:9,0:6:0.80:0,1,2	0/0:15,0:14:10.21:0,10,82	0/0:13,0:13:12.09:0,12,64	0/1:23,0:20:11.09:26,0,11	0/1:20,0:17:1.20:106,0,1	0/1:32,0:31:57.26:517,0,57	1/1:21,0:20:17.23:129,17,0	0/1:11,0:10:4.10:4,0,55
chr10	60163146	.	C	CTCTCTT	2577.91	PASS	AB=0.984;AC=27;AF=0.482;AN=56;BaseQRankSum=2.624;DP=553;FS=8.346;HRun=0;HaplotypeScore=155.2391;InbreedingCoeff=-0.2018;MQ=38.18;MQ0=28;MQRankSum=-1.282;QD=6.11;ReadPosRankSum=-0.357;VQSLOD=2.1636;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:19,0:23:7.96:8,0,37	0/1:12,0:11:55.77:56,0,59	0/0:11,0:3:5.96:0,6,44	0/0:20,0:9:0.30:0,0,1	0/0:24,0:21:3.19:0,3,57	1/1:21,0:20:0.29:194,0,0	1/1:23,0:19:43.37:336,43,0	0/0:28,0:27:65.38:0,65,394	0/1:12,0:11:8.24:177,0,8	0/1:19,0:15:50.19:223,0,50	0/0:20,0:18:5.43:0,5,44	1/1:25,0:24:20.14:453,20,0	1/1:6,19:26:5.46:237,5,0	0/1:21,0:19:43.94:102,0,44	0/0:20,0:18:7.09:0,7,50	0/1:21,0:18:60.47:71,0,60	0/1:17,0:16:65.14:65,0,99	0/1:19,0:19:40.27:40,0,76	1/1:13,0:10:7.92:46,8,0	0/1:29,0:28:86.63:87,0,107	0/0:8,0:5:2.29:0,2,10	0/1:15,0:14:37.26:40,0,37	0/1:13,0:13:9.07:9,0,30	1/1:24,1:22:11.64:137,12,0	0/1:20,0:17:72.07:79,0,72	0/1:32,0:30:99:351,0,190	0/1:20,0:19:3.35:3,0,96	0/1:11,0:10:23.71:24,0,78
chr10	60163156	.	C	CTGTGTGTG	1744.45	PASS	AB=0.967;AC=14;AF=0.250;AN=56;BaseQRankSum=-1.461;DP=510;FS=4.527;HRun=0;HaplotypeScore=172.8129;InbreedingCoeff=0.0193;MQ=37.82;MQ0=17;MQRankSum=-0.167;QD=8.08;ReadPosRankSum=4.112;VQSLOD=1.8093;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:21:5.63:140,6,0	0/1:12,0:11:99:187,0,117	0/0:10,0:3:9.03:0,9,205	0/0:20,0:8:12.95:0,13,302	0/0:26,0:23:6.16:0,6,72	0/0:16,0:16:33.58:0,34,671	0/0:26,0:22:42.41:0,42,765	0/0:19,0:18:47.28:0,47,528	0/1:13,0:12:20.29:56,0,20	0/1:17,0:12:99:114,0,287	0/1:15,0:13:2.48:41,0,2	0/0:23,0:21:12.15:0,12,458	0/0:25,0:24:1.30:0,1,250	0/1:15,5:22:2.51:12,0,3	0/1:16,0:14:31.17:48,0,31	0/1:20,1:18:38.85:194,0,39	0/1:15,0:14:35.32:212,0,35	0/1:19,0:19:83.73:196,0,84	0/0:8,0:5:8.92:0,9,114	0/0:28,0:28:15.40:0,15,139	0/0:8,0:5:0.93:0,1,8	0/0:14,0:13:11.74:0,12,196	0/0:10,0:10:15.05:0,15,276	0/0:22,0:19:8.84:0,9,165	0/0:19,0:16:12.75:0,13,151	0/1:30,0:28:99:554,0,412	0/0:20,0:19:14.62:0,15,196	1/1:10,0:10:7.78:145,8,0
chr10	60163158	.	C	CTGTGTGTGTG	2650	PASS	AB=0.976;AC=18;AF=0.321;AN=56;BaseQRankSum=-4.550;DP=512;FS=10.683;HRun=0;HaplotypeScore=178.8776;InbreedingCoeff=-0.0379;MQ=37.46;MQ0=17;MQRankSum=0.444;QD=10.52;ReadPosRankSum=2.924;VQSLOD=1.8188;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:21:6.36:196,6,0	0/1:11,0:10:67.55:244,0,68	0/0:13,0:3:9.03:0,9,243	0/0:25,0:10:13.15:0,13,337	0/0:25,0:23:2.59:0,3,24	0/0:16,0:16:36.55:0,37,745	0/0:25,0:21:38.63:0,39,878	0/0:19,0:18:39:0,39,274	0/1:13,0:12:52.95:71,0,53	0/1:17,0:12:99:181,0,175	1/1:17,0:15:3.89:88,4,0	0/0:23,0:21:12.40:0,12,435	0/0:22,0:21:7.45:0,7,277	0/1:25,0:22:14.55:15,0,23	0/1:16,0:14:12.56:71,0,13	0/1:20,0:17:34.78:260,0,35	0/1:15,0:14:22.84:295,0,23	0/1:19,0:19:64.59:297,0,65	0/1:9,0:6:36.18:54,0,36	0/0:28,0:28:10.41:0,10,64	0/1:8,0:5:0.27:0,0,1	0/0:13,0:12:11.63:0,12,135	0/0:10,0:10:14.75:0,15,230	0/0:22,0:19:8.60:0,9,133	0/1:12,5:17:54.36:66,0,54	0/1:30,0:28:99:727,0,187	0/0:19,0:18:14.81:0,15,113	1/1:9,0:9:12.92:249,13,0
chr10	60163160	.	C	CTGTGTGTGTG	5421.55	PASS	AB=0.806;AC=32;AF=0.571;AN=56;BaseQRankSum=-6.968;DP=567;FS=2.477;HRun=0;HaplotypeScore=201.8618;InbreedingCoeff=0.6384;MQ=37.67;MQ0=16;MQRankSum=-0.031;QD=15.99;ReadPosRankSum=2.239;VQSLOD=3.6808;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:27:9.39:308,9,0	1/1:12,0:11:12.02:291,12,0	0/0:18,0:3:9.03:0,9,219	0/0:27,0:11:21.49:0,21,326	0/1:11,15:28:0.30:0,0,0	0/0:15,0:17:31.82:0,32,607	0/0:13,0:20:34.50:0,35,759	0/0:7,0:15:3.01:0,3,69	1/1:5,0:13:4.19:85,4,0	1/1:21,0:17:22.32:576,22,0	1/1:21,0:19:6.90:159,7,0	0/0:22,0:22:2.05:0,2,309	0/0:22,0:22:9.92:0,10,248	1/1:26,0:23:3.94:134,4,0	1/1:17,0:15:3.01:120,3,0	1/1:22,0:19:14.09:473,14,0	1/1:20,0:18:11.01:458,11,0	1/1:23,0:23:27.09:763,27,0	1/1:12,0:9:9.92:283,10,0	0/0:13,16:33:0:0,0,0	0/1:8,0:5:0.06:0,0,1	0/0:12,0:13:5.90:0,6,115	0/0:6,0:10:6.02:0,6,140	0/0:11,0:19:2.62:0,3,76	1/1:18,0:16:1.58:121,2,0	1/1:14,0:30:51.13:1171,51,0	1/1:8,12:22:3.01:87,3,0	1/1:10,0:10:18.06:393,18,0
chr10	60166180	.	AACAC	A	1423.06	PASS	AB=0.909;AC=26;AF=0.542;AN=48;BaseQRankSum=2.474;DP=483;FS=7.954;HRun=0;HaplotypeScore=96.5844;InbreedingCoeff=0.6324;MQ=61.37;MQ0=11;MQRankSum=0.661;QD=6.30;ReadPosRankSum=1.344;VQSLOD=1.5177;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:23:24.08:0,24,479	1/1:4,2:5:3.01:46,3,0	./.	./.	0/0:19,0:19:17.20:0,17,317	0/0:13,0:21:0:0,0,0	0/0:19,0:17:12.02:0,12,163	./.	0/0:11,0:12:14.74:0,15,196	1/1:12,4:16:12.04:185,12,0	1/1:10,6:16:6.02:92,6,0	0/1:9,0:9:0.14:0,0,0	0/0:15,0:18:9.02:0,9,124	1/1:10,6:15:12.01:161,12,0	1/1:13,6:19:8.15:136,8,0	1/1:13,1:15:3:46,3,0	1/1:21,6:27:17.25:196,17,0	0/0:15,0:17:25.06:0,25,458	./.	1/1:11,8:19:9.03:139,9,0	0/1:21,6:26:15.91:83,0,16	0/0:12,0:18:3.01:0,3,50	0/0:17,0:24:6.02:0,6,97	0/0:20,0:28:5.93:0,6,58	1/1:13,5:18:9.03:139,9,0	1/1:10,6:16:9.07:157,9,0	1/1:8,6:14:12.04:175,12,0	1/1:5,0:5:5.43:37,5,0
chr10	60168092	.	T	TAA	12606.87	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-17.447;DP=801;FS=1.643;HRun=0;HaplotypeScore=87.0229;InbreedingCoeff=0.9826;MQ=79.88;MQ0=0;MQRankSum=-1.139;QD=54.81;ReadPosRankSum=-0.044;VQSLOD=4.8772;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:99:0,99,1537	0/0:18,0:18:54.18:0,54,881	0/0:21,0:21:60.18:0,60,977	0/0:17,0:17:48.16:0,48,737	0/0:27,0:27:81.28:0,81,1322	1/1:1,13:15:42.10:812,42,0	1/1:1,23:26:66.18:1300,66,0	1/1:1,29:32:96.30:1855,96,0	0/0:45,0:45:99:0,132,2124	0/0:49,0:49:99:0,144,2328	0/0:17,0:17:51.15:0,51,786	1/1:0,37:41:99:2121,105,0	1/1:0,35:35:93.32:1890,93,0	0/0:38,1:39:53.35:0,53,1696	0/0:44,0:44:99:0,132,2086	0/0:31,0:31:93.32:0,93,1517	0/0:14,0:14:42.14:0,42,682	0/0:16,0:16:45.08:0,45,678	0/0:25,0:25:69.24:0,69,1124	0/0:31,0:31:93.29:0,93,1471	0/0:64,0:64:99:0,193,3059	1/1:1,26:27:75.21:1458,75,0	1/1:0,25:25:75.26:1524,75,0	1/1:1,28:29:81.28:1646,81,0	0/0:14,0:14:39.13:0,39,636	0/0:40,0:40:99:0,120,1937	0/0:24,0:24:72.25:0,72,1175	0/0:2,0:2:6.02:0,6,98
chr10	60168602	.	G	GC	4746.94	PASS	AB=0.746;AC=45;AF=0.804;AN=56;BaseQRankSum=-3.571;DP=545;FS=2.085;HRun=10;HaplotypeScore=85.7016;InbreedingCoeff=-0.0179;MQ=78.78;MQ0=1;MQRankSum=-2.601;QD=9.11;ReadPosRankSum=2.055;VQSLOD=3.9742;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:12,14:26:33.94:338,34,0	1/1:3,5:8:9.02:96,9,0	0/0:23,0:24:14.58:0,15,245	0/1:20,1:19:3.25:3,0,196	0/1:8,7:15:34.23:67,0,34	1/1:3,1:21:6.44:28,6,0	1/1:3,2:26:23.23:115,23,0	1/1:29,0:29:29.50:317,29,0	1/1:5,21:26:8.44:295,8,0	1/1:7,10:16:12.03:126,12,0	0/1:7,3:10:29.66:104,0,30	1/1:2,0:19:12.65:61,13,0	1/1:3,0:18:17.35:94,17,0	0/1:7,13:20:22.23:190,0,22	1/1:7,17:24:14.45:359,14,0	1/1:2,24:26:54.14:575,54,0	1/1:3,17:20:39.10:416,39,0	1/1:8,18:26:42.11:448,42,0	1/1:9,4:15:2.25:210,2,0	0/1:11,7:18:28.30:123,0,28	0/1:9,9:17:23.28:23,0,37	1/1:5,0:22:19.87:103,20,0	1/1:2,0:16:5.33:26,5,0	1/1:1,1:14:17:84,17,0	1/1:10,5:18:8.85:76,9,0	0/1:18,0:18:6.58:130,0,7	0/1:6,8:15:23.16:209,0,23	0/1:7,7:14:93.13:130,0,93
chr10	60169758	.	T	TATC	12013.63	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-11.430;DP=718;FS=1.007;HRun=0;HaplotypeScore=94.9804;InbreedingCoeff=0.9997;MQ=79.18;MQ0=0;MQRankSum=-5.313;QD=58.89;ReadPosRankSum=0.063;VQSLOD=6.4111;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:58:99:0,175,2941	0/0:14,0:14:39.13:0,39,659	0/0:25,0:25:53.72:0,54,737	0/0:13,0:13:27.81:0,28,368	0/0:24,0:24:66.23:0,66,1125	1/1:2,22:27:63.22:1452,63,0	1/1:5,16:21:54.19:1185,54,0	1/1:9,25:34:90.31:2052,90,0	0/0:38,0:38:99:0,111,1892	0/0:23,0:23:66.21:0,66,1072	0/0:18,0:18:54.18:0,54,920	1/1:5,25:32:87.30:1923,87,0	1/1:2,15:18:45.15:1023,45,0	0/0:25,0:25:75.24:0,75,1250	0/0:30,0:30:87.28:0,87,1456	0/0:16,0:16:48.16:0,48,815	0/0:33,0:33:96.31:0,96,1609	0/0:18,0:18:54.14:0,54,889	0/0:20,0:20:54.17:0,54,896	0/0:28,0:28:78.26:0,78,1295	0/0:43,0:43:99:0,123,2051	1/1:3,24:27:78.27:1708,78,0	1/1:1,20:22:63.22:1429,63,0	1/1:1,21:23:54.04:1243,54,0	0/0:20,0:20:57.20:0,57,972	0/0:35,0:35:96.29:0,96,1559	0/0:24,0:24:72.25:0,72,1228	0/0:9,0:9:27.09:0,27,446
chr10	60171624	.	TG	T	19402.26	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-0.824;DP=623;FS=4.255;HRun=4;HaplotypeScore=65.6363;InbreedingCoeff=0.9946;MQ=80.41;MQ0=0;MQRankSum=-7.756;QD=32.72;ReadPosRankSum=6.141;VQSLOD=5.0472;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,38:38:99:1368,114,0	1/1:1,20:21:57.14:684,57,0	0/0:17,0:17:33.65:0,34,464	0/0:13,0:13:24.05:0,24,315	1/1:0,16:16:45.10:525,45,0	1/1:1,21:22:63.19:756,63,0	1/1:0,21:21:60.18:720,60,0	1/1:0,35:35:99:1183,102,0	1/1:1,21:22:63.19:756,63,0	1/1:2,29:31:93.27:1099,93,0	1/1:0,10:10:24.07:288,24,0	1/1:1,17:18:48.15:576,48,0	1/1:0,24:24:66.20:790,66,0	1/1:1,21:22:60.18:720,60,0	1/1:0,23:23:57.01:684,57,0	1/1:2,29:31:78.24:936,78,0	1/1:1,33:34:93.29:1116,93,0	1/1:4,23:27:69.21:828,69,0	1/1:1,17:18:51.13:589,51,0	1/1:1,10:11:24.07:288,24,0	1/1:0,32:32:90.28:1080,90,0	1/1:0,17:17:45.14:540,45,0	1/1:1,19:20:51.16:612,51,0	1/1:1,25:26:69.21:828,69,0	1/1:0,20:20:54.17:648,54,0	1/1:2,24:26:72.22:864,72,0	1/1:0,21:21:57.16:673,57,0	1/1:0,7:7:21.06:252,21,0
chr10	60172179	.	G	GTTT	11211.14	PASS	AB=1.000;AC=54;AF=0.964;AN=56;BaseQRankSum=-3.174;DP=586;FS=8.913;HRun=12;HaplotypeScore=100.7537;InbreedingCoeff=0.4603;MQ=67.97;MQ0=1;MQRankSum=-2.495;QD=19.13;ReadPosRankSum=1.161;VQSLOD=3.1664;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,2:25:41.87:355,42,0	1/1:3,2:16:29.93:293,30,0	0/1:10,0:10:1.87:2,0,76	0/1:11,0:9:4.35:4,0,58	1/1:5,1:18:40.12:368,40,0	1/1:3,16:25:48.12:780,48,0	1/1:4,11:18:33.09:535,33,0	1/1:18,16:38:72.19:1122,72,0	1/1:10,0:31:50.36:401,50,0	1/1:11,0:24:32.95:297,33,0	1/1:3,0:23:51.98:394,52,0	1/1:4,2:12:14.99:177,15,0	1/1:11,16:27:32.05:528,32,0	1/1:5,1:19:35.90:321,36,0	1/1:4,0:15:23.43:196,23,0	1/1:2,1:20:40.12:332,40,0	1/1:1,1:14:26.42:220,26,0	1/1:4,0:15:29.12:213,29,0	1/1:7,0:19:34.85:264,35,0	1/1:7,2:33:70.67:576,71,0	1/1:3,2:24:41.88:380,42,0	1/1:3,11:16:37.63:589,38,0	1/1:6,13:21:42.10:678,42,0	1/1:3,21:26:51.17:911,51,0	1/1:8,0:21:23.95:217,24,0	1/1:5,0:22:49.09:395,49,0	1/1:3,1:29:61.34:494,61,0	1/1:2,1:13:17.95:169,18,0
chr10	60172359	.	A	ATT	4510.97	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-7.105;DP=593;FS=8.745;HRun=9;HaplotypeScore=69.8681;InbreedingCoeff=0.9962;MQ=78.37;MQ0=2;MQRankSum=-1.605;QD=32.22;ReadPosRankSum=1.047;VQSLOD=4.5881;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:93.23:0,93,989	0/0:10,0:10:30.08:0,30,319	0/0:17,0:17:29.80:0,30,291	0/0:14,0:14:15.01:0,15,159	0/0:37,0:37:99:0,102,1078	1/1:1,21:22:57.19:877,57,0	1/1:1,0:18:39.80:137,40,0	0/0:28,0:28:66.11:0,66,696	0/0:22,0:22:57.14:0,57,606	0/0:30,0:30:90.23:0,90,958	0/0:19,0:19:54.13:0,54,575	1/1:4,11:15:30.10:456,30,0	1/1:2,21:23:51.02:785,51,0	0/0:22,0:22:54.12:0,54,574	0/0:22,0:24:68.64:0,69,694	0/0:17,0:17:45.11:0,45,479	0/0:14,0:14:42.11:0,42,447	0/0:13,0:13:30.05:0,30,319	0/0:29,0:30:66.07:0,66,751	0/0:27,0:27:75.16:0,75,783	0/0:12,0:12:33.08:0,33,351	1/1:3,15:17:36.04:501,36,0	1/1:3,24:26:69.23:1062,69,0	1/1:2,15:17:45.15:693,45,0	0/0:24,0:24:69.17:0,69,734	0/0:26,0:26:78.20:0,78,830	0/0:27,0:27:72.14:0,72,757	0/0:8,0:8:24.06:0,24,255
chr10	60173573	.	GCA	G	177.75	PASS	AB=0.917;AC=22;AF=0.524;AN=42;BaseQRankSum=3.182;DP=525;FS=5.664;HRun=0;HaplotypeScore=99.6904;InbreedingCoeff=0.1640;MQ=68.19;MQ0=8;MQRankSum=-1.505;QD=0.77;ReadPosRankSum=1.760;VQSLOD=1.3917;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:38:6.02:0,6,84	0/1:8,1:9:19.63:20,0,73	./.	./.	0/1:18,0:18:27.11:27,0,112	./.	./.	./.	0/1:14,3:17:19.35:19,0,76	0/0:18,0:18:12.03:0,12,129	./.	0/1:16,0:16:8.04:8,0,11	1/1:13,0:13:8.52:41,9,0	1/1:21,0:20:2.82:14,3,0	1/1:12,1:14:2.84:14,3,0	1/1:16,0:18:2.84:14,3,0	0/0:31,0:37:30.03:0,30,349	0/1:15,2:17:25.31:25,0,37	0/0:9,0:9:5.88:0,6,42	0/0:17,0:17:5.74:0,6,36	0/0:30,0:29:24.04:0,24,257	1/1:17,0:17:2.68:11,3,0	./.	1/1:30,0:30:2.84:14,3,0	1/1:11,7:18:3.01:31,3,0	1/1:18,0:18:8.22:63,8,0	0/0:9,0:9:12.03:0,12,151	0/1:5,0:5:17.10:17,0,31
chr10	60173574	.	C	CAAGAAT	7488.45	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=4.276;DP=548;FS=3.172;HRun=0;HaplotypeScore=125.3610;InbreedingCoeff=0.9877;MQ=66.23;MQ0=12;MQRankSum=-6.637;QD=48.31;ReadPosRankSum=-5.068;VQSLOD=3.4721;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:37:81.25:0,81,1833	0/0:9,0:9:20.70:0,21,382	0/0:25,0:21:57.17:0,57,1218	0/0:23,0:18:52.99:0,53,1130	0/0:19,0:19:38.47:0,38,844	1/1:18,0:18:48.16:1308,48,0	1/1:18,0:18:43.94:1005,44,0	1/1:17,0:17:51.16:1189,51,0	0/0:17,0:17:36.12:0,36,820	0/0:19,0:19:47.95:0,48,1042	0/0:10,0:9:27.09:0,27,652	1/1:15,0:15:30.48:868,30,0	1/1:14,0:14:40.36:774,40,0	0/0:23,0:20:56.77:0,57,1189	0/0:14,0:14:30.09:0,30,682	0/0:19,0:19:45.15:0,45,1077	0/0:40,0:39:75.25:0,75,1776	0/0:17,0:17:39.09:0,39,836	0/0:13,0:13:25.49:0,25,404	0/0:19,0:19:36.10:0,36,751	0/0:33,0:31:63.15:0,63,1411	1/1:18,0:18:47.53:1056,48,0	1/1:23,0:22:54.19:1170,54,0	1/1:7,18:32:11.94:119,12,0	0/0:18,0:18:27.09:0,27,619	0/0:19,0:19:52.72:0,53,1204	0/0:11,0:11:14.75:0,15,371	0/0:6,0:5:15.05:0,15,326
chr10	60173575	.	AC	A	1403.07	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=12.594;DP=532;FS=2.149;HRun=1;HaplotypeScore=86.5804;InbreedingCoeff=0.8900;MQ=65.12;MQ0=12;MQRankSum=-6.061;QD=10.02;ReadPosRankSum=-3.200;VQSLOD=0.3315;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:38:81.26:0,81,1051	0/0:9,0:9:20.90:0,21,250	0/0:23,0:19:57.13:0,57,656	0/0:23,0:18:51.62:0,52,628	0/0:19,0:19:40.88:0,41,509	1/1:17,0:17:43.41:271,43,0	1/1:16,0:16:34.82:251,35,0	0/1:15,0:15:13.22:77,0,13	0/0:17,0:17:35.48:0,35,456	0/0:19,0:19:51.16:0,51,672	0/0:10,0:9:27.09:0,27,344	1/1:11,1:12:10.67:113,11,0	1/1:8,3:11:25.42:204,25,0	0/0:23,0:20:54.07:0,54,634	0/0:15,0:15:29.37:0,29,350	0/0:18,0:18:44.64:0,45,542	0/0:39,0:38:81.70:0,82,1083	0/0:17,0:17:39.79:0,40,445	0/0:13,0:13:24.04:0,24,284	0/0:19,0:19:36.09:0,36,440	0/0:33,0:31:66.14:0,66,869	1/1:17,1:18:38.72:303,39,0	1/1:18,4:21:47.49:318,47,0	1/1:27,2:29:8.87:61,9,0	0/0:18,0:18:26.45:0,26,305	0/0:20,0:20:54.86:0,55,608	0/0:11,0:11:27.89:0,28,351	0/0:6,0:5:14.94:0,15,178
chr10	60173579	.	ACACAC	A	388.48	PASS	AB=0.923;AC=13;AF=0.232;AN=56;BaseQRankSum=11.526;DP=530;FS=26.962;HRun=0;HaplotypeScore=117.6178;InbreedingCoeff=0.8116;MQ=57.79;MQ0=19;MQRankSum=-1.251;QD=3.24;ReadPosRankSum=-0.805;VQSLOD=0.2512;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:34:75.24:0,75,1164	0/0:9,0:9:18.53:0,19,421	0/0:20,0:16:48.15:0,48,600	0/0:18,0:13:34.35:0,34,419	0/0:21,0:21:41.68:0,42,793	1/1:15,0:15:20.69:72,21,0	1/1:15,0:15:11.37:41,11,0	0/0:12,0:12:5.07:0,5,50	0/0:16,0:16:33.09:0,33,590	0/0:20,0:19:53.66:0,54,888	0/0:11,0:10:27.03:0,27,395	0/1:11,1:12:58.39:88,0,58	1/1:7,3:10:13.21:179,13,0	0/0:21,0:18:49.04:0,49,677	0/0:15,0:15:12.31:0,12,376	0/0:20,0:20:48.11:0,48,578	0/0:42,0:40:89.33:0,89,1873	0/0:21,0:20:50.40:0,50,766	0/0:12,0:12:29.03:0,29,402	0/0:18,0:18:33.11:0,33,563	0/0:36,0:32:69.14:0,69,1400	1/1:17,1:17:10.84:85,11,0	1/1:17,2:20:14.55:46,15,0	1/1:27,2:28:3.48:54,3,0	0/0:18,0:18:27.09:0,27,386	0/0:22,0:21:60.67:0,61,825	0/0:12,0:12:31.35:0,31,655	0/0:10,0:9:27.09:0,27,420
chr10	60174883	.	AT	A	2236.03	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=9.649;DP=525;FS=22.341;HRun=8;HaplotypeScore=59.5668;InbreedingCoeff=0.9875;MQ=80.95;MQ0=1;MQRankSum=0.291;QD=20.90;ReadPosRankSum=2.410;VQSLOD=2.2488;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:75.20:0,75,881	0/0:8,0:8:24.07:0,24,289	0/0:31,0:27:48.90:0,49,427	0/0:16,1:15:23.66:0,24,196	0/0:23,0:23:66.19:0,66,785	1/1:1,28:29:60.09:579,60,0	1/1:0,8:8:24.04:232,24,0	0/0:20,0:20:45.10:0,45,503	0/0:12,0:12:33.09:0,33,387	0/0:19,0:19:54.16:0,54,643	0/0:27,0:27:78.24:0,78,941	1/1:0,12:12:30.05:290,30,0	1/1:0,22:22:60.10:579,60,0	0/0:17,0:17:48.15:0,48,576	0/0:17,0:17:42.13:0,42,507	0/0:18,0:18:48.15:0,48,579	0/0:31,0:31:87.24:0,87,1026	0/0:11,0:11:33.06:0,33,382	0/0:19,0:19:54.14:0,54,620	0/0:24,0:24:66.18:0,66,777	0/0:8,0:8:24.04:0,24,256	1/1:2,3:5:9.01:87,9,0	1/1:0,16:16:32.85:317,33,0	1/1:2,13:15:36.06:348,36,0	0/0:14,0:15:41.96:0,42,453	0/0:24,0:24:72.20:0,72,850	0/0:33,0:33:96.27:0,96,1137	0/0:12,0:12:36.11:0,36,435
chr10	60175264	.	C	CAGGTTTTGATTGACTTGGTTTTTAAATCAA	52249.13	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=10.037;DP=674;FS=40.200;HRun=0;HaplotypeScore=472.1776;InbreedingCoeff=0.9994;MQ=85.56;MQ0=0;MQRankSum=-18.779;QD=239.67;ReadPosRankSum=0.082;VQSLOD=3.6940;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:72.25:0,72,5083	0/0:9,0:9:27.09:0,27,1922	0/0:27,0:27:81.24:0,81,3857	0/0:24,0:24:31.76:0,32,2711	0/0:32,0:32:96.33:0,96,6608	1/1:16,3:20:57.15:5822,57,0	1/1:29,0:29:87.30:7499,87,0	1/1:44,0:44:99:7924,126,0	0/0:11,0:11:33.11:0,33,2070	0/0:21,0:21:63.19:0,63,4293	0/0:33,0:33:93.30:0,93,6551	1/1:24,2:32:75.26:6998,75,0	1/1:21,2:27:66.70:6673,67,0	0/0:16,0:16:48.15:0,48,2529	0/0:23,0:23:69.24:0,69,4497	0/0:21,0:21:57.20:0,57,3853	0/0:35,0:35:99:0,102,6706	0/0:14,0:14:36.12:0,36,2226	0/0:24,0:24:71.92:0,72,4631	0/0:17,0:17:48.15:0,48,2957	0/0:21,0:21:63.22:0,63,4278	1/1:18,1:22:57.20:5457,57,0	1/1:30,3:33:96.20:9297,96,0	1/1:9,1:11:24.04:2578,24,0	0/0:17,0:17:51.15:0,51,3200	0/0:36,0:36:99:0,102,6774	0/0:30,0:30:90.31:0,90,5783	0/0:18,0:18:54.19:0,54,3745
chr10	60176131	.	CT	C	1731.35	PASS	AB=0.710;AC=31;AF=0.554;AN=56;BaseQRankSum=-3.117;DP=435;FS=5.065;HRun=16;HaplotypeScore=66.1616;InbreedingCoeff=0.2389;MQ=74.88;MQ0=7;MQRankSum=1.152;QD=5.12;ReadPosRankSum=3.893;VQSLOD=2.2594;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:11,13:26:10.91:175,0,11	0/1:1,2:4:16.30:27,0,16	1/1:19,0:15:0.25:1,0,0	0/1:14,0:11:8.83:10,0,9	1/1:6,9:15:20.37:122,20,0	0/0:12,1:17:12.12:0,12,150	0/0:9,0:15:23.92:0,24,137	0/1:20,2:24:24.82:25,0,76	1/1:5,4:9:8.74:54,9,0	0/1:12,5:20:46.80:76,0,47	0/1:5,7:13:2.66:89,0,3	0/0:8,0:16:11.70:0,12,75	0/0:12,0:13:30.47:0,30,195	0/1:9,1:10:12.81:54,0,13	1/1:6,12:17:7.32:154,7,0	1/1:2,10:14:21.60:119,22,0	0/1:3,18:24:4.32:167,0,4	0/1:11,11:27:1.60:180,0,2	0/1:7,10:16:6.44:126,0,6	1/1:9,7:17:17.94:100,18,0	1/1:2,5:7:11.73:72,12,0	0/0:6,0:11:17.69:0,18,124	0/0:3,0:8:14.47:0,14,86	0/0:12,0:13:17.70:0,18,130	0/1:9,7:16:20.04:69,0,20	1/1:13,9:22:10.99:137,11,0	1/1:5,10:15:17.01:97,17,0	1/1:0,4:5:10.86:60,11,0
chr10	60176355	.	AGTGTGTGTGT	A	2251.16	PASS	AB=0.817;AC=14;AF=0.259;AN=54;BaseQRankSum=1.321;DP=515;FS=0.000;HRun=0;HaplotypeScore=149.4310;InbreedingCoeff=0.6850;MQ=56.04;MQ0=13;MQRankSum=-7.063;QD=16.31;ReadPosRankSum=1.643;VQSLOD=2.7618;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:29:5.06:0,5,204	0/0:5,0:10:17.80:0,18,698	0/0:14,0:7:2.84:0,3,14	./.	0/0:12,0:21:18.06:0,18,694	1/1:5,6:11:12.04:359,12,0	1/1:14,11:25:12.51:341,13,0	0/0:27,0:27:36.07:0,36,1069	0/0:10,0:16:21.04:0,21,826	0/0:19,0:18:43.70:0,44,1732	0/0:12,0:16:12.04:0,12,422	0/1:8,9:19:3.57:411,0,4	1/1:5,10:15:18.06:539,18,0	0/0:8,0:17:14.71:0,15,545	0/0:5,0:11:6.02:0,6,262	0/0:7,0:7:6.02:0,6,231	0/0:25,0:47:58.73:0,59,2420	0/0:11,0:29:39.13:0,39,1575	0/0:16,0:14:16.87:0,17,409	0/0:6,0:17:26.05:0,26,1087	0/0:11,0:17:15.05:0,15,594	1/1:9,7:17:9.02:250,9,0	1/1:8,7:15:11.94:311,12,0	1/1:11,7:19:6.02:160,6,0	0/1:7,0:16:54.71:55,0,502	0/0:21,0:22:54.19:0,54,2126	0/0:4,0:13:11.05:0,11,259	0/0:13,0:15:24.08:0,24,986
chr10	60179887	.	CTG	C	1254.08	PASS	AB=0.831;AC=42;AF=0.808;AN=52;BaseQRankSum=3.487;DP=554;FS=6.556;HRun=0;HaplotypeScore=77.2601;InbreedingCoeff=0.1852;MQ=67.27;MQ0=8;MQRankSum=0.340;QD=2.90;ReadPosRankSum=1.135;VQSLOD=1.1022;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:2.50:0,2,9	1/1:6,3:8:6.01:64,6,0	./.	./.	0/1:17,0:18:44.89:45,0,53	1/1:17,0:17:3.82:16,4,0	1/1:8,0:9:2.84:14,3,0	0/0:32,0:32:2.60:0,3,10	0/1:17,3:20:13.88:55,0,14	1/1:18,0:18:3.47:28,3,0	1/1:9,7:17:14.87:141,15,0	1/1:17,0:20:5.68:28,6,0	1/1:16,0:18:5.68:28,6,0	0/0:19,0:19:23.99:0,24,263	1/1:13,5:18:9.02:96,9,0	0/1:14,7:22:29.31:96,0,29	1/1:16,8:24:12.02:129,12,0	1/1:18,0:19:11.60:49,12,0	1/1:15,0:14:3:32,3,0	1/1:19,4:25:11.44:89,11,0	1/1:26,0:25:11.82:91,12,0	1/1:20,0:27:11.36:56,11,0	1/1:14,1:20:14.12:84,14,0	1/1:13,0:18:11.36:56,11,0	0/1:12,5:17:15.82:55,0,16	1/1:17,0:22:13.31:67,13,0	1/1:16,1:19:5.84:46,6,0	1/1:8,0:12:5.68:28,6,0
chr10	60182906	.	A	AC	9035.51	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-15.955;DP=682;FS=0.311;HRun=1;HaplotypeScore=60.8861;InbreedingCoeff=0.9997;MQ=81.33;MQ0=0;MQRankSum=-3.381;QD=43.23;ReadPosRankSum=0.734;VQSLOD=4.8958;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,105,1436	0/0:10,0:10:30.10:0,30,420	0/0:16,0:17:35.61:0,36,543	0/0:17,0:17:39.58:0,40,424	0/0:31,0:31:93.10:0,93,1272	1/1:1,20:21:45.15:719,45,0	1/1:0,24:24:57.19:911,57,0	1/1:1,35:36:99:1650,105,0	0/0:28,0:28:81.27:0,81,1131	0/0:34,0:34:99:0,102,1393	0/0:30,0:30:90.29:0,90,1241	1/1:1,23:24:66.23:1055,66,0	1/1:0,24:24:66.23:1055,66,0	0/0:34,0:34:99:0,99,1382	0/0:23,0:23:69.23:0,69,965	0/0:28,0:28:84.28:0,84,1168	0/0:17,0:17:51.17:0,51,713	0/0:18,0:18:51.17:0,51,713	0/0:22,0:22:66.21:0,66,907	0/0:29,0:29:84.28:0,84,1173	0/0:24,0:24:72.24:0,72,1005	1/1:0,19:19:54.18:863,54,0	1/1:0,32:32:93.32:1487,93,0	1/1:0,29:29:81.28:1295,81,0	0/0:17,0:17:48.16:0,48,671	0/0:30,0:30:87.29:0,87,1214	0/0:20,0:20:54.18:0,54,753	0/0:9,0:9:27.08:0,27,361
chr10	60184353	.	A	AAC	1790.90	PASS	AB=0.621;AC=13;AF=0.232;AN=56;BaseQRankSum=0.660;DP=552;FS=6.704;HRun=0;HaplotypeScore=112.4248;InbreedingCoeff=0.8585;MQ=72.86;MQ0=7;MQRankSum=-0.043;QD=14.56;ReadPosRankSum=0.976;VQSLOD=3.3148;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:23.61:0,24,236	0/0:8,0:8:17.56:0,18,131	0/0:34,0:26:38.05:0,38,487	0/0:27,0:18:33.01:0,33,404	0/0:19,0:19:38.80:0,39,349	1/1:19,3:22:36.88:449,37,0	1/1:24,1:25:26.38:347,26,0	0/0:42,0:42:99:0,111,1011	0/0:25,0:25:59.28:0,59,516	0/0:23,0:23:65.67:0,66,670	0/0:11,0:11:29.95:0,30,262	0/1:7,11:18:21.38:134,0,21	1/1:11,5:16:32.99:341,33,0	0/0:9,0:9:17.96:0,18,158	0/0:26,0:26:56.45:0,56,474	0/0:22,0:22:53.12:0,53,506	0/0:22,0:21:44.69:0,45,397	0/0:15,0:15:38.93:0,39,371	0/0:25,0:23:54.85:0,55,508	0/0:22,0:22:50.24:0,50,514	0/0:17,0:15:25.99:0,26,305	1/1:10,1:11:19.70:286,20,0	1/1:2,12:14:2.99:51,3,0	1/1:17,0:16:28.85:366,29,0	0/0:12,0:11:29.22:0,29,252	0/0:24,0:23:60.12:0,60,652	0/0:14,0:14:32.67:0,33,322	0/0:10,0:10:23.96:0,24,207
chr10	60184356	.	ACT	A	764.52	PASS	AB=0.941;AC=27;AF=0.519;AN=52;BaseQRankSum=-1.282;DP=558;FS=1.712;HRun=0;HaplotypeScore=120.0074;InbreedingCoeff=0.2229;MQ=68.52;MQ0=13;MQRankSum=2.227;QD=2.36;ReadPosRankSum=2.176;VQSLOD=1.9141;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:19,0:20:3.64:42,0,4	0/1:7,1:8:7.01:38,0,7	./.	./.	1/1:16,0:17:11.14:60,11,0	0/0:20,0:20:3.25:0,3,117	0/0:24,0:24:11.33:0,11,97	0/0:45,0:44:6:0,6,23	1/1:22,1:24:5.14:56,5,0	1/1:24,0:23:0.41:118,0,0	1/1:10,0:10:5.84:42,6,0	0/0:24,0:23:10.97:0,11,73	0/0:22,0:22:10.88:0,11,75	1/1:7,0:7:2.74:12,3,0	0/1:19,7:26:5.07:179,0,5	0/1:20,0:21:1.48:79,0,1	0/1:24,0:23:13.13:13,0,22	0/1:17,0:17:15.89:16,0,34	0/1:21,0:21:7.32:7,0,7	0/1:22,0:22:13.12:41,0,13	1/1:17,1:16:12.26:62,12,0	0/0:10,0:10:10.53:0,11,65	1/1:15,0:15:3:26,3,0	0/0:20,0:18:8.37:0,8,103	0/0:12,0:11:5.49:0,5,34	1/1:22,0:21:16.57:74,17,0	1/1:11,0:14:13.33:55,13,0	0/1:10,0:10:4.57:7,0,5
chr10	60184397	.	CTG	C	467.16	PASS	AB=0.988;AC=21;AF=0.404;AN=52;BaseQRankSum=2.006;DP=543;FS=21.959;HRun=0;HaplotypeScore=143.5716;InbreedingCoeff=-0.3393;MQ=41.18;MQ0=48;MQRankSum=3.386;QD=1.17;ReadPosRankSum=-1.723;VQSLOD=0.4317;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:20:14.48:14,0,33	1/1:11,0:10:0.26:20,0,0	./.	./.	0/0:22,0:21:7.85:0,8,29	0/1:20,0:19:43.41:61,0,43	0/1:25,0:24:37.59:38,0,82	0/0:31,0:20:50.08:0,50,303	0/1:21,0:21:0.79:69,0,1	0/0:25,0:23:6.30:0,6,215	0/1:6,0:6:1.39:1,0,6	0/1:26,2:26:49.37:49,0,53	0/1:18,0:18:8.97:48,0,9	0/0:15,0:13:3.22:0,3,13	0/1:29,0:28:0.58:86,0,1	0/1:27,0:27:25.82:35,0,26	0/1:23,0:20:17.22:17,0,57	0/1:15,0:14:7.87:8,0,71	0/1:22,0:16:0.50:0,0,134	0/1:27,0:27:22.61:23,0,49	0/1:29,0:22:3.48:3,0,35	0/1:11,0:11:41.68:48,0,42	1/1:16,0:14:0.47:1,0,0	0/1:25,3:23:31.43:54,0,31	0/0:14,0:13:2.68:0,3,11	0/0:22,0:21:3.84:0,4,161	0/1:19,0:18:22.34:22,0,51	0/0:14,0:9:5.62:0,6,27
chr10	60184403	.	GTC	G	717.02	PASS	AB=0.943;AC=25;AF=0.481;AN=52;BaseQRankSum=2.235;DP=535;FS=0.000;HRun=0;HaplotypeScore=146.6034;InbreedingCoeff=0.1097;MQ=40.98;MQ0=46;MQRankSum=-0.790;QD=1.99;ReadPosRankSum=3.077;VQSLOD=1.8247;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:15,8:20:2.93:32,3,0	1/1:11,0:10:4.70:17,5,0	./.	./.	1/1:22,1:22:2.99:33,3,0	0/0:17,0:16:5.63:0,6,35	0/0:22,0:20:2.74:0,3,14	0/0:33,1:23:7.40:0,7,305	1/1:21,2:23:4.71:40,5,0	0/1:28,0:26:3.30:3,0,470	0/0:5,1:6:2.99:0,3,24	0/0:26,0:25:0.54:0,1,37	0/0:17,0:17:3.83:0,4,16	0/0:14,0:13:0.47:0,0,1	1/1:25,3:27:5.96:55,6,0	1/1:25,1:26:2.05:46,2,0	0/1:20,1:18:11.75:35,0,12	0/1:13,1:13:21.28:32,0,21	1/1:20,1:16:0.80:123,1,0	0/1:27,0:26:4.37:86,0,4	1/1:28,3:24:6.12:36,6,0	0/0:10,0:10:1.55:0,2,4	0/0:15,0:13:0.47:0,0,1	0/1:26,0:21:4.11:4,0,9	0/0:13,0:13:1.25:0,1,3	0/1:25,0:24:37.51:150,0,38	0/1:12,8:19:3.03:154,0,3	1/1:13,0:8:0.89:2,1,0
chr10	60184415	.	CTCTCTCTCTCTG	C	3056.30	PASS	AB=1.000;AC=33;AF=0.635;AN=52;BaseQRankSum=-0.290;DP=531;FS=4.266;HRun=0;HaplotypeScore=181.2355;InbreedingCoeff=0.1353;MQ=40.60;MQ0=45;MQRankSum=0.889;QD=6.95;ReadPosRankSum=0.495;VQSLOD=2.4301;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:19:5.94:72,6,0	1/1:4,7:10:4.71:17,5,0	./.	./.	1/1:7,16:22:2.99:31,3,0	0/0:22,0:21:5.57:0,6,35	0/0:22,0:20:6.25:0,6,40	0/1:29,0:18:6.75:7,0,295	1/1:4,16:20:12.04:245,12,0	0/1:30,0:28:99:142,0,385	0/0:5,0:5:2.99:0,3,24	0/1:28,0:26:56.38:107,0,56	0/1:19,0:19:6.61:41,0,7	0/0:4,10:13:0.47:0,0,1	1/1:9,17:25:5.96:55,6,0	1/1:6,21:27:3.44:120,3,0	0/1:17,0:14:14.11:168,0,14	0/1:12,0:11:7.57:131,0,8	1/1:13,11:19:30.45:478,30,0	1/1:12,16:27:5.82:125,6,0	1/1:30,0:23:13.05:112,13,0	1/1:13,0:13:0.08:15,0,0	0/0:12,0:10:0.47:0,0,1	0/1:25,0:21:4.10:4,0,10	0/0:2,14:16:1.18:0,1,3	1/1:9,14:22:36.16:560,36,0	1/1:21,0:19:31.92:671,32,0	1/1:7,5:6:6.02:98,6,0
chr10	60184417	.	CTCTCTCTCTG	C	1936.94	PASS	AB=1.000;AC=38;AF=0.905;AN=42;BaseQRankSum=0.418;DP=531;FS=7.430;HRun=0;HaplotypeScore=176.4100;InbreedingCoeff=0.1850;MQ=40.44;MQ0=45;MQRankSum=1.212;QD=4.31;ReadPosRankSum=0.621;VQSLOD=2.2252;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:19:3:25,3,0	0/1:11,0:10:0:0,0,0	./.	./.	./.	1/1:22,0:21:0.47:1,0,0	1/1:21,0:19:0.65:15,1,0	1/1:28,0:18:2.87:17,3,0	1/1:20,0:20:9.03:141,9,0	1/1:16,12:26:32.10:535,32,0	./.	0/1:30,0:28:11.97:137,0,12	1/1:19,0:19:14.68:88,15,0	./.	./.	1/1:27,0:27:2.95:54,3,0	1/1:17,0:14:5.36:37,5,0	1/1:12,0:11:10.71:61,11,0	1/1:24,0:19:18.25:206,18,0	1/1:28,0:27:3.01:33,3,0	1/1:30,0:23:8.84:67,9,0	1/1:14,0:14:2.96:19,3,0	./.	0/1:25,0:21:0:0,0,1	0/1:15,0:15:0:0,0,0	1/1:23,0:22:14.28:230,14,0	1/1:21,0:19:21.03:326,21,0	1/1:12,0:6:4.54:28,5,0
chr10	60184425	.	CTG	C	2465.91	PASS	AB=1.000;AC=44;AF=0.846;AN=52;BaseQRankSum=4.573;DP=515;FS=0.701;HRun=0;HaplotypeScore=145.7762;InbreedingCoeff=-0.0862;MQ=41.02;MQ0=35;MQRankSum=2.133;QD=4.92;ReadPosRankSum=-2.570;VQSLOD=2.3284;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:18:11.91:91,12,0	1/1:9,0:8:2.73:13,3,0	./.	./.	1/1:21,0:20:5.85:39,6,0	1/1:22,1:22:10.60:72,11,0	1/1:22,0:20:9.66:71,10,0	0/1:29,0:23:97.25:97,0,442	0/1:20,0:20:4.19:51,0,4	0/1:26,0:25:99:124,0,367	0/1:9,0:7:3.19:41,0,3	1/1:32,0:30:9.70:178,10,0	1/1:21,1:22:34.07:208,34,0	0/0:13,0:12:0.47:0,0,1	1/1:24,1:24:8.68:71,9,0	1/1:24,0:24:5.96:46,6,0	1/1:16,0:14:13.84:94,14,0	0/1:13,0:12:4.21:99,0,4	0/1:19,0:15:23.88:141,0,24	1/1:24,0:23:5.50:44,6,0	1/1:27,0:20:20.64:189,21,0	1/1:13,0:13:8.92:63,9,0	1/1:15,0:15:8.98:72,9,0	1/1:25,0:22:8.85:70,9,0	1/1:15,0:15:2.92:22,3,0	1/1:23,0:22:37:352,37,0	1/1:18,1:17:39.53:297,40,0	1/1:10,0:5:5.88:36,6,0
chr10	60184435	.	CTG	C	72.79	PASS	AB=0.954;AC=12;AF=0.214;AN=56;BaseQRankSum=5.819;DP=560;FS=29.059;HRun=0;HaplotypeScore=145.7407;InbreedingCoeff=-0.0720;MQ=42.39;MQ0=34;MQRankSum=-1.806;QD=0.31;ReadPosRankSum=0.776;VQSLOD=0.8934;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:17,2:17:2.14:2,0,61	1/1:9,0:8:1.80:5,2,0	0/0:5,0:1:2.80:0,3,13	0/0:10,0:8:14.05:0,14,204	0/0:23,0:22:12.01:0,12,143	0/1:22,2:23:12.85:13,0,38	0/0:25,0:23:13.30:0,13,65	0/0:30,0:25:68.60:0,69,726	0/0:20,0:20:0.59:0,1,59	0/0:25,0:24:33.56:0,34,471	0/0:12,0:10:14.97:0,15,121	0/1:26,5:29:63.04:63,0,70	0/0:20,2:22:17.30:0,17,164	0/0:18,0:17:15.47:0,15,170	0/1:27,0:26:8.51:9,0,81	0/0:26,0:26:11.20:0,11,73	0/1:15,1:15:24.84:25,0,130	0/1:13,0:12:2.57:3,0,106	0/0:19,0:15:10.14:0,10,301	0/1:25,0:24:2.72:3,0,121	0/1:29,0:22:36.44:36,0,204	0/1:16,1:17:18.34:33,0,18	0/0:15,2:17:14.13:0,14,89	0/1:25,1:23:0.20:9,0,0	0/0:15,0:15:2.99:0,3,23	0/0:27,0:26:16:0,16,613	0/0:20,0:18:9.30:0,9,271	0/0:10,0:5:8.91:0,9,61
chr10	60184445	.	CTG	C	426.14	PASS	AB=0.987;AC=17;AF=0.304;AN=56;BaseQRankSum=8.177;DP=582;FS=9.677;HRun=0;HaplotypeScore=134.5688;InbreedingCoeff=0.5721;MQ=45.87;MQ0=30;MQRankSum=-1.322;QD=1.93;ReadPosRankSum=1.786;VQSLOD=1.8229;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:17:9.03:0,9,173	0/1:8,0:7:0.01:0,0,0	0/0:13,0:5:8.95:0,9,78	0/0:24,0:15:18.09:0,18,441	0/0:24,0:24:21.01:0,21,300	1/1:20,2:22:9.83:69,10,0	1/1:24,1:23:16.93:125,17,0	0/0:33,0:28:77.89:0,78,964	0/1:23,0:23:1.57:2,0,214	0/0:28,0:27:27.69:0,28,650	0/0:12,0:10:18.03:0,18,298	0/1:28,0:26:13.34:53,0,13	1/1:20,0:20:16.69:109,17,0	0/0:21,0:20:24.53:0,25,379	0/0:26,0:25:27.04:0,27,398	0/0:23,0:23:12.03:0,12,190	0/0:16,0:15:1.69:0,2,315	0/1:13,1:13:7.01:7,0,396	0/0:22,0:17:26.84:0,27,430	0/1:22,0:21:6.08:6,0,181	0/0:25,1:21:36.57:0,37,618	1/1:15,2:17:9.08:52,9,0	1/1:16,0:16:14.90:108,15,0	1/1:24,2:23:7.70:70,8,0	0/0:16,0:16:6.01:0,6,83	0/0:31,0:30:53.79:0,54,1058	0/0:20,0:18:10.72:0,11,572	0/0:7,0:4:9.03:0,9,141
chr10	60184449	.	CTCTCTCTG	C	1855.14	PASS	AB=1.000;AC=18;AF=0.321;AN=56;BaseQRankSum=8.463;DP=584;FS=13.630;HRun=0;HaplotypeScore=167.8841;InbreedingCoeff=0.5740;MQ=49.93;MQ0=29;MQRankSum=-4.077;QD=7.89;ReadPosRankSum=5.681;VQSLOD=0.9459;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:17:14.78:0,15,149	0/0:8,0:7:2.96:0,3,39	0/0:16,0:8:15.03:0,15,183	0/0:29,0:20:47.79:0,48,586	0/0:23,0:23:21.07:0,21,280	1/1:21,2:23:15.19:209,15,0	1/1:25,0:23:23.63:342,24,0	0/0:33,0:28:63.83:0,64,683	0/1:23,0:23:6.48:6,0,179	0/1:29,0:29:96.93:97,0,562	0/0:12,0:10:17.79:0,18,189	1/1:22,4:24:23.47:295,23,0	1/1:17,2:19:35.78:361,36,0	0/0:19,0:18:24.08:0,24,319	0/0:28,0:27:33.11:0,33,438	0/0:24,0:24:2.89:0,3,184	0/0:16,0:15:19.88:0,20,230	0/1:16,0:15:87.26:87,0,346	0/0:19,0:14:1.85:0,2,266	0/0:19,0:18:12.79:0,13,161	0/0:26,0:21:42.22:0,42,469	1/1:16,1:17:18.04:259,18,0	1/1:12,2:14:15.03:189,15,0	1/1:22,2:21:8.52:162,9,0	0/0:19,0:19:14.98:0,15,199	0/0:31,0:31:38.42:0,38,634	0/1:19,0:17:37.76:38,0,220	0/0:8,0:5:11.95:0,12,130
chr10	60186233	.	TTTTTTTTTTTTA	T	1114.35	PASS	AB=1.000;AC=16;AF=0.308;AN=52;BaseQRankSum=-0.013;DP=481;FS=4.327;HRun=0;HaplotypeScore=96.9468;InbreedingCoeff=0.6345;MQ=47.37;MQ0=90;MQRankSum=-0.322;QD=10.32;ReadPosRankSum=-2.719;VQSLOD=1.4347;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:13:33.04:0,33,574	0/0:6,0:4:12.04:0,12,232	0/0:72,0:9:11.66:0,12,377	0/0:60,0:10:15.27:0,15,178	0/0:17,0:13:6.93:0,7,456	1/1:2,10:13:17.44:323,17,0	1/1:1,4:5:6.02:145,6,0	1/1:22,0:15:41.66:338,42,0	0/0:6,0:4:6.02:0,6,149	0/0:23,0:19:53.14:0,53,1084	0/0:19,0:13:9.85:0,10,654	1/1:7,0:6:3.01:68,3,0	1/1:9,0:7:12.04:199,12,0	0/0:7,0:5:5.96:0,6,138	0/0:12,0:11:29.89:0,30,581	0/0:14,0:12:30.06:0,30,570	0/0:20,0:18:20.97:0,21,818	0/0:17,0:14:15.76:0,16,662	0/0:24,0:19:23.74:0,24,781	0/0:8,0:7:21.07:0,21,390	./.	./.	1/1:1,6:6:3.56:160,4,0	1/1:2,6:7:3.01:30,3,0	0/0:21,0:18:18.06:0,18,442	0/1:12,0:9:0.59:1,0,402	0/1:19,0:16:16.19:16,0,552	0/0:27,0:13:3.01:0,3,76
chr10	60186234	.	TTTTTTTTTTTA	T	1099.38	PASS	AB=1.000;AC=18;AF=0.346;AN=52;BaseQRankSum=-0.441;DP=480;FS=10.477;HRun=0;HaplotypeScore=90.7618;InbreedingCoeff=0.4530;MQ=46.01;MQ0=90;MQRankSum=-0.083;QD=7.43;ReadPosRankSum=-3.499;VQSLOD=0.0447;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:13:27.49:0,27,434	0/0:6,0:4:11.99:0,12,175	0/0:72,0:9:10.98:0,11,331	0/0:60,0:9:16.73:0,17,164	0/0:16,0:12:4.47:0,4,325	1/1:14,1:13:10.51:284,11,0	1/1:5,0:5:6.02:143,6,0	1/1:21,0:14:41.84:336,42,0	0/0:6,0:4:6.02:0,6,137	0/0:23,0:19:47.40:0,47,864	0/0:19,0:13:9.43:0,9,525	1/1:1,6:6:3.01:91,3,0	1/1:7,5:7:11.97:215,12,0	0/0:7,0:5:5.58:0,6,110	0/0:13,0:12:3.96:0,4,414	0/0:14,0:12:27.53:0,28,435	0/0:20,0:18:2.20:0,2,653	0/1:17,0:14:7.73:8,0,498	0/1:24,0:19:3.26:3,0,566	0/0:8,0:7:21.06:0,21,313	./.	./.	1/1:7,0:6:3.97:130,4,0	1/1:9,0:7:2.84:14,3,0	0/0:21,0:18:18.06:0,18,367	0/1:12,0:9:1.91:2,0,336	0/1:19,0:16:35.44:35,0,440	0/0:27,0:13:3.01:0,3,74
chr10	60186239	.	TTTTTTA	T	2645.10	PASS	AB=0.958;AC=34;AF=0.630;AN=54;BaseQRankSum=0.929;DP=463;FS=37.249;HRun=0;HaplotypeScore=59.6337;InbreedingCoeff=0.0545;MQ=45.19;MQ0=90;MQRankSum=3.229;QD=9.06;ReadPosRankSum=3.100;VQSLOD=-0.2867;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:15,0:11:46.30:87,0,46	1/1:6,0:4:8.64:55,9,0	0/0:63,0:8:11.44:0,11,187	0/0:62,0:10:5:0,5,87	1/1:14,0:11:16.24:135,16,0	0/1:15,0:13:34.01:142,0,34	1/1:5,0:5:6.02:98,6,0	1/1:23,0:15:44.80:354,45,0	0/0:6,0:4:0:0,0,1	0/1:19,0:15:56.50:170,0,56	1/1:17,0:11:22.14:163,22,0	1/1:7,0:6:3.01:50,3,0	0/1:12,0:7:8.20:70,0,8	0/1:6,0:4:0.73:8,0,1	1/1:12,0:11:22.27:191,22,0	1/1:12,0:10:13.18:137,13,0	0/1:19,1:18:3.80:157,0,4	0/1:15,0:13:23.78:137,0,24	1/1:24,0:19:13.27:278,13,0	1/1:7,0:6:13.90:95,14,0	1/1:3,0:3:3:26,3,0	./.	1/1:7,0:6:5.13:67,5,0	0/0:9,0:7:2.94:0,3,18	0/1:9,13:19:6.38:35,0,6	0/1:15,0:12:54.95:197,0,55	0/1:15,0:12:7.46:145,0,7	0/0:29,0:15:2.98:0,3,21
chr10	60186240	.	TTTTTA	T	3119.05	PASS	AB=0.875;AC=40;AF=0.741;AN=54;BaseQRankSum=-0.126;DP=447;FS=22.182;HRun=0;HaplotypeScore=51.6943;InbreedingCoeff=0.1634;MQ=45.19;MQ0=91;MQRankSum=3.306;QD=11.06;ReadPosRankSum=3.161;VQSLOD=0.7329;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:16,0:12:17.04:104,0,17	1/1:5,0:4:11.86:103,12,0	0/0:64,0:8:11.43:0,11,153	0/0:62,0:10:5.02:0,5,78	1/1:14,0:11:21.35:162,21,0	0/1:15,0:13:44.62:121,0,45	1/1:5,0:5:6.02:85,6,0	1/1:24,0:15:44.80:354,45,0	1/1:4,0:2:3:26,3,0	0/1:7,9:12:20.88:229,0,21	1/1:16,0:10:23.80:183,24,0	1/1:7,0:6:3.01:43,3,0	0/1:12,0:7:33.73:56,0,34	1/1:5,0:3:3:26,3,0	1/1:11,0:10:26.76:209,27,0	1/1:10,1:9:21.20:185,21,0	1/1:16,0:14:32.66:240,33,0	1/1:16,0:13:23.46:196,23,0	1/1:22,0:17:31.01:332,31,0	1/1:7,0:6:14.90:113,15,0	1/1:3,0:3:3:26,3,0	./.	1/1:7,0:6:5.33:54,5,0	0/0:9,0:7:3:0,3,26	1/1:19,0:17:3.48:31,3,0	0/1:5,9:11:18.25:195,0,18	0/1:15,0:12:21.93:200,0,22	0/0:29,0:15:2.88:0,3,15
chr10	60186241	.	TTTTA	T	3170.46	PASS	AB=0.983;AC=42;AF=0.778;AN=54;BaseQRankSum=-0.864;DP=436;FS=13.255;HRun=0;HaplotypeScore=46.0153;InbreedingCoeff=0.2250;MQ=44.00;MQ0=91;MQRankSum=3.509;QD=11.45;ReadPosRankSum=2.525;VQSLOD=0.6661;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:12:3.87:111,4,0	1/1:6,0:4:11.90:109,12,0	0/0:63,0:8:11.36:0,11,125	0/0:56,0:8:3.20:0,3,51	1/1:13,1:11:22.95:181,23,0	0/1:15,0:13:37.02:101,0,37	1/1:5,0:5:6.02:72,6,0	1/1:24,0:15:44.80:354,45,0	1/1:4,0:2:3:26,3,0	0/1:15,0:11:10.44:228,0,10	1/1:16,0:10:23.85:184,24,0	1/1:7,0:6:3.01:37,3,0	0/1:12,0:7:30.24:43,0,30	1/1:2,3:3:3.01:45,3,0	1/1:11,0:10:26.76:203,27,0	1/1:11,0:9:22.17:179,22,0	1/1:16,1:15:35.67:279,36,0	1/1:14,1:12:26.26:218,26,0	1/1:22,0:17:47.34:357,47,0	1/1:6,0:5:14.52:101,15,0	1/1:2,0:2:3:26,3,0	./.	1/1:7,0:6:4.51:42,5,0	0/0:9,0:7:2.90:0,3,16	1/1:20,0:17:5.94:45,6,0	1/1:14,0:11:6.85:195,7,0	0/1:13,0:11:22.89:176,0,23	0/0:29,0:15:0:0,0,0
chr10	60186244	.	TA	T	3081.27	PASS	AC=46;AF=0.920;AN=50;BaseQRankSum=-0.080;DP=422;FS=1.669;HRun=3;HaplotypeScore=35.1958;InbreedingCoeff=0.3860;MQ=44.92;MQ0=85;MQRankSum=2.826;QD=11.33;ReadPosRankSum=-1.339;VQSLOD=1.0390;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:11:20:130,20,0	1/1:6,0:5:14.58:88,15,0	0/0:57,0:8:7.44:0,7,90	0/0:55,0:8:0.21:0,0,24	1/1:16,0:13:29.84:230,30,0	1/1:12,0:11:11.33:59,11,0	1/1:5,0:5:5.80:32,6,0	1/1:24,0:18:53.79:428,54,0	1/1:6,0:4:8.99:75,9,0	1/1:15,0:11:8.26:192,8,0	1/1:15,0:10:23.86:183,24,0	1/1:7,0:6:2.92:17,3,0	1/1:9,0:5:3.81:19,4,0	1/1:5,0:3:2.96:19,3,0	1/1:12,0:11:29.58:206,30,0	1/1:11,0:9:23.81:180,24,0	1/1:17,0:15:34.82:233,35,0	1/1:15,0:12:29.86:229,30,0	1/1:6,15:16:47.30:353,47,0	1/1:5,0:4:11.92:90,12,0	1/1:2,0:2:3:26,3,0	./.	1/1:7,0:6:2.92:17,3,0	./.	1/1:20,0:17:4.97:18,5,0	1/1:13,0:10:6.98:177,7,0	1/1:14,0:12:26.45:186,26,0	./.
chr10	60188444	.	TTTTCTTTTC	T	3644.23	PASS	AB=0.775;AC=14;AF=0.250;AN=56;BaseQRankSum=1.105;DP=575;FS=7.139;HRun=0;HaplotypeScore=154.6048;InbreedingCoeff=0.7731;MQ=61.12;MQ0=17;MQRankSum=-7.167;QD=24.62;ReadPosRankSum=0.676;VQSLOD=2.8572;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:75.17:0,75,2242	0/0:5,0:5:12.01:0,12,283	0/0:31,0:15:19.43:0,19,185	0/0:40,0:14:9.92:0,10,155	0/0:24,0:23:42.12:0,42,1531	1/1:3,20:22:27.05:725,27,0	1/1:6,13:18:12.04:268,12,0	0/1:24,0:23:17.37:17,0,811	0/0:14,0:14:24.06:0,24,688	0/0:18,0:17:51.16:0,51,1639	0/0:24,0:23:63.11:0,63,1515	1/1:2,15:17:14.83:432,15,0	1/1:2,15:17:21.05:642,21,0	0/0:16,0:15:7.27:0,7,1051	0/0:18,0:18:33.09:0,33,1149	0/0:18,0:16:24.05:0,24,706	0/0:34,0:34:69.14:0,69,2123	0/0:26,0:26:62.16:0,62,1631	0/0:21,0:20:54.03:0,54,895	0/0:17,0:16:36.05:0,36,959	0/0:11,0:11:18.05:0,18,527	1/1:6,16:21:29.35:991,29,0	1/1:2,13:15:20.80:385,21,0	0/1:2,9:11:12.60:184,0,13	0/0:26,0:26:66.12:0,66,1738	0/0:24,0:22:57.14:0,57,1921	0/0:14,0:14:30.05:0,30,901	0/0:8,0:8:15.05:0,15,546
chr10	60188453	.	CTTTT	C	747.10	PASS	AB=0.979;AC=12;AF=0.214;AN=56;BaseQRankSum=7.832;DP=534;FS=3.597;HRun=10;HaplotypeScore=116.2642;InbreedingCoeff=0.4892;MQ=54.45;MQ0=15;MQRankSum=-8.511;QD=5.26;ReadPosRankSum=2.566;VQSLOD=-0.6375;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:84.23:0,84,1459	0/0:5,0:5:12.04:0,12,219	0/0:12,0:5:5.61:0,6,49	0/0:28,0:5:4.55:0,5,29	0/0:23,0:22:45.02:0,45,769	1/1:23,0:22:23.02:124,23,0	1/1:17,0:16:1.24:26,1,0	1/1:11,9:19:26.09:373,26,0	0/0:15,0:15:24.03:0,24,411	0/0:19,0:17:42.14:0,42,785	0/0:18,0:17:36.07:0,36,629	0/1:17,0:17:9.45:59,0,9	1/1:17,0:17:6.35:123,6,0	0/0:13,0:13:26.21:0,26,524	0/0:17,0:17:33.08:0,33,631	0/0:20,0:18:30.10:0,30,522	0/0:36,0:37:78.21:0,78,1373	0/0:22,0:22:57.15:0,57,986	0/0:21,0:21:51.17:0,51,752	0/0:16,0:16:41.95:0,42,606	0/0:12,0:12:21.07:0,21,381	0/1:19,0:20:6.71:137,0,7	0/1:16,0:16:15.13:43,0,15	0/1:10,0:11:21.70:22,0,33	0/0:22,0:23:54.14:0,54,926	0/0:23,0:21:57.19:0,57,1003	0/0:15,0:15:33.11:0,33,600	0/0:7,0:7:15.05:0,15,282
chr10	60188956	.	G	GCTTC	4172.32	PASS	AB=0.912;AC=51;AF=0.944;AN=54;BaseQRankSum=0.634;DP=569;FS=0.000;HRun=0;HaplotypeScore=110.6911;InbreedingCoeff=0.1355;MQ=66.06;MQ0=5;MQRankSum=-1.380;QD=7.64;ReadPosRankSum=1.156;VQSLOD=1.8414;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:16,7:25:18.06:418,18,0	1/1:13,0:13:14.99:151,15,0	0/1:19,0:15:0:0,0,0	./.	1/1:2,6:8:18.06:389,18,0	1/1:13,0:17:2.94:18,3,0	1/1:26,0:24:12.02:165,12,0	1/1:37,0:36:1.25:3,1,0	0/1:18,9:28:12.46:397,0,12	1/1:25,0:24:7.58:112,8,0	1/1:17,0:17:22.28:295,22,0	1/1:18,0:28:18.04:265,18,0	1/1:14,0:14:6.02:93,6,0	1/1:24,0:23:9.02:107,9,0	1/1:24,0:24:9.03:144,9,0	0/1:26,0:26:4.72:170,0,5	1/1:25,0:25:6.02:113,6,0	1/1:14,0:14:12.04:204,12,0	1/1:20,0:20:6.02:102,6,0	1/1:12,0:12:16.26:179,16,0	1/1:38,0:37:6.73:34,7,0	1/1:13,0:13:12.04:203,12,0	1/1:14,0:14:6.02:67,6,0	1/1:16,1:19:0.47:1,0,0	1/1:21,0:21:9.02:113,9,0	1/1:7,1:18:22.22:306,22,0	1/1:15,0:15:2.96:19,3,0	1/1:3,0:6:6.02:104,6,0
chr10	60189099	.	A	AG	3087.21	PASS	AB=0.817;AC=46;AF=0.958;AN=48;BaseQRankSum=-3.284;DP=94;FS=10.864;HRun=1;HaplotypeScore=14.9579;InbreedingCoeff=-0.0528;MQ=88.76;MQ0=0;MQRankSum=-3.284;QD=33.20;ReadPosRankSum=0.545;VQSLOD=1.4864;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,1:1:3.01:48,3,0	1/1:0,2:2:6.02:96,6,0	0/1:3,1:4:39.93:40,0,54	0/1:8,2:7:33.08:33,0,42	1/1:0,4:4:12.04:192,12,0	./.	1/1:0,4:4:6.02:96,6,0	1/1:0,3:3:9.03:144,9,0	1/1:0,6:6:15.05:240,15,0	1/1:0,4:4:12.04:192,12,0	1/1:0,2:2:6.02:96,6,0	1/1:2,3:5:12.04:187,12,0	1/1:0,1:1:1.25:3,1,0	1/1:0,5:5:12.04:191,12,0	1/1:1,3:4:6.02:96,6,0	1/1:0,3:3:9.03:144,9,0	1/1:0,3:3:9.03:144,9,0	./.	1/1:0,4:4:12.04:192,12,0	1/1:0,2:2:6.02:96,6,0	1/1:0,2:2:3.01:48,3,0	1/1:0,3:3:3.01:48,3,0	./.	./.	1/1:0,8:8:24.08:383,24,0	1/1:0,5:5:15.05:238,15,0	1/1:0,7:7:12.04:191,12,0	1/1:0,1:1:3.01:48,3,0
chr10	60190944	.	G	GT	15171.12	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-7.057;DP=521;FS=13.820;HRun=6;HaplotypeScore=52.3845;InbreedingCoeff=0.9050;MQ=77.38;MQ0=0;MQRankSum=-7.687;QD=31.22;ReadPosRankSum=4.779;VQSLOD=3.9265;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,23:24:60.19:754,60,0	1/1:0,7:7:18.06:226,18,0	0/0:16,0:16:35.94:0,36,334	0/0:19,0:19:3.74:0,4,209	1/1:1,19:20:57.18:717,57,0	1/1:3,27:31:84.27:1055,84,0	1/1:2,18:20:48.15:604,48,0	1/1:7,35:41:99:1264,105,0	1/1:0,13:13:36.12:453,36,0	1/1:1,13:14:39.12:490,39,0	1/1:0,24:24:69.04:810,69,0	1/1:1,18:20:48.15:604,48,0	1/1:2,15:18:39.10:488,39,0	1/1:1,10:11:24.07:291,24,0	1/1:1,21:22:45.14:566,45,0	1/1:2,23:25:54.16:679,54,0	1/1:2,9:11:24.08:302,24,0	1/1:1,9:10:21.07:264,21,0	1/1:3,15:18:45.07:514,45,0	1/1:0,19:19:57.05:663,57,0	1/1:3,24:27:57.18:717,57,0	1/1:0,10:11:27.02:319,27,0	1/1:1,13:14:36.12:453,36,0	1/1:1,13:14:36.12:453,36,0	1/1:0,21:21:60.19:754,60,0	1/1:0,13:13:39.12:487,39,0	1/1:3,19:22:57.18:716,57,0	1/1:0,15:15:42.13:528,42,0
chr10	60191407	.	GAAC	G	7628.57	PASS	AB=0.587;AC=47;AF=0.904;AN=52;BaseQRankSum=-0.512;DP=517;FS=0.000;HRun=0;HaplotypeScore=90.1311;InbreedingCoeff=0.3304;MQ=62.20;MQ0=4;MQRankSum=-0.335;QD=16.84;ReadPosRankSum=2.121;VQSLOD=4.4078;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,10:20:11.54:264,12,0	1/1:5,8:13:21.07:276,21,0	./.	0/0:19,0:8:0:0,0,0	1/1:14,5:19:9.03:119,9,0	1/1:2,0:8:17.78:120,18,0	1/1:4,0:5:2.98:21,3,0	./.	1/1:7,16:23:42.14:553,42,0	1/1:10,9:19:24.02:295,24,0	1/1:12,9:21:17.34:236,17,0	1/1:3,0:10:20.83:147,21,0	1/1:3,0:7:11.90:84,12,0	1/1:11,10:22:30.06:376,30,0	1/1:13,17:32:54.09:672,54,0	1/1:7,18:25:48.14:617,48,0	1/1:6,7:13:21.07:277,21,0	1/1:7,6:13:15.05:197,15,0	1/1:18,4:21:18.05:215,18,0	1/1:18,20:41:45.02:535,45,0	1/1:11,11:22:21.07:276,21,0	1/1:1,0:3:5.95:42,6,0	1/1:4,0:11:17.75:119,18,0	0/0:2,0:3:0:0,0,0	1/1:5,13:19:36.08:455,36,0	1/1:12,11:23:33.08:417,33,0	1/1:10,25:35:54.18:711,54,0	0/1:8,19:27:3.38:602,0,3
chr10	60192068	.	TG	T	11366.22	PASS	AB=0.949;AC=53;AF=0.946;AN=56;BaseQRankSum=-1.435;DP=669;FS=4.875;HRun=10;HaplotypeScore=73.6877;InbreedingCoeff=0.2226;MQ=80.06;MQ0=0;MQRankSum=-5.544;QD=16.99;ReadPosRankSum=6.234;VQSLOD=5.2538;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:23,28:51:63.03:715,63,0	1/1:1,5:6:11.84:92,12,0	0/1:21,0:21:4.39:4,0,230	0/1:17,2:19:25.25:25,0,229	1/1:8,15:23:59.97:516,60,0	1/1:7,18:25:62.97:545,63,0	1/1:7,26:34:76.95:657,77,0	0/1:30,1:32:5.47:5,0,206	1/1:3,25:29:71.02:604,71,0	1/1:4,9:14:32.01:263,32,0	1/1:6,15:21:44.98:391,45,0	1/1:8,28:36:80.91:697,81,0	1/1:4,19:23:53.99:469,54,0	1/1:7,22:29:74.93:644,75,0	1/1:2,19:21:56.95:489,57,0	1/1:6,17:23:44.96:389,45,0	1/1:4,21:25:43.41:524,43,0	1/1:1,4:5:15:130,15,0	1/1:6,14:21:49.98:415,50,0	1/1:9,16:27:55.02:449,55,0	1/1:9,18:27:47.02:397,47,0	1/1:8,11:19:38.98:337,39,0	1/1:1,8:9:18:156,18,0	1/1:5,33:39:81.17:819,81,0	1/1:7,14:22:38.01:318,38,0	1/1:9,14:23:47.82:399,48,0	1/1:10,24:33:64.58:658,65,0	1/1:0,10:10:29.99:260,30,0
chr10	60192205	.	G	GC	22642.05	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-7.064;DP=629;FS=2.596;HRun=3;HaplotypeScore=54.7513;InbreedingCoeff=0.9967;MQ=81.79;MQ0=0;MQRankSum=-8.932;QD=37.99;ReadPosRankSum=4.617;VQSLOD=5.0266;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,31:33:93.31:1301,93,0	1/1:2,8:10:21.07:294,21,0	0/0:15,0:15:42.11:0,42,492	0/0:18,0:18:42.01:0,42,456	1/1:1,28:29:75.21:1027,75,0	1/1:3,30:33:87.21:1177,87,0	1/1:1,21:22:63.21:882,63,0	1/1:2,25:27:75.25:1049,75,0	1/1:0,17:17:48.16:672,48,0	1/1:1,40:41:99:1679,120,0	1/1:2,20:22:57.19:796,57,0	1/1:1,18:19:57.08:747,57,0	1/1:3,17:20:60.11:782,60,0	1/1:2,18:20:51.17:714,51,0	1/1:0,17:17:48.16:671,48,0	1/1:1,20:21:57.19:798,57,0	1/1:1,27:28:81.22:1111,81,0	1/1:0,10:10:24.08:336,24,0	1/1:0,18:18:54.14:719,54,0	1/1:1,24:25:69.19:937,69,0	1/1:1,19:20:48.16:672,48,0	1/1:2,22:24:69.20:930,69,0	1/1:1,13:14:42.14:587,42,0	1/1:0,12:12:36.12:504,36,0	1/1:3,30:33:78.26:1092,78,0	1/1:1,31:32:93.28:1279,93,0	1/1:2,32:34:95.98:1339,96,0	1/1:0,15:15:39.13:546,39,0
chr10	60192271	.	GT	G	4099.77	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=4.588;DP=573;FS=1.975;HRun=10;HaplotypeScore=78.4738;InbreedingCoeff=0.8695;MQ=71.27;MQ0=0;MQRankSum=-0.882;QD=20.30;ReadPosRankSum=0.965;VQSLOD=4.5790;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:45.08:0,45,478	0/0:11,0:12:32.92:0,33,346	0/1:19,0:17:9.84:10,0,214	0/0:7,0:5:2.13:0,2,29	0/0:32,3:35:23.95:0,24,923	1/1:7,21:29:73.94:618,74,0	1/1:4,14:18:50.96:438,51,0	1/1:9,26:35:74.92:646,75,0	0/0:15,0:15:42.11:0,42,465	0/0:31,0:31:66.17:0,66,722	0/0:23,2:25:11.06:0,11,578	1/1:3,20:23:59.97:517,60,0	1/1:1,18:19:53.99:468,54,0	0/0:10,1:12:6.87:0,7,287	0/0:12,0:12:33.09:0,33,365	0/0:13,0:14:38.94:0,39,412	0/0:31,1:32:67.16:0,67,956	0/0:6,0:6:18.05:0,18,199	0/0:15,1:18:21.74:0,22,434	0/0:21,1:23:30.92:0,31,544	0/0:16,0:16:36.04:0,36,375	1/1:1,20:21:59.96:517,60,0	1/1:1,25:26:71.99:625,72,0	1/1:1,11:12:29.99:260,30,0	0/0:24,0:25:66:0,66,703	0/0:21,1:22:31.10:0,31,571	0/0:36,0:36:96.09:0,96,1041	0/0:7,0:7:18.03:0,18,189
chr10	60192688	.	A	ATCTG	6512.23	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-4.515;DP=735;FS=19.773;HRun=0;HaplotypeScore=112.2420;InbreedingCoeff=0.9919;MQ=67.21;MQ0=2;MQRankSum=-0.700;QD=29.33;ReadPosRankSum=-0.593;VQSLOD=3.1569;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:90.28:0,90,1382	0/0:13,0:13:21.06:0,21,314	0/0:27,0:23:18.03:0,18,236	0/0:24,0:19:21.06:0,21,297	0/0:39,0:39:75.23:0,75,1156	1/1:9,12:21:21.07:505,21,0	1/1:9,12:23:21.07:505,21,0	1/1:41,16:56:51.10:887,51,0	0/0:27,0:27:48.15:0,48,740	0/0:31,0:31:60.20:0,60,941	0/0:28,0:28:48.14:0,48,726	1/1:10,24:36:57.20:1372,57,0	1/1:9,17:27:42.14:1009,42,0	0/0:24,0:24:48.14:0,48,742	0/0:22,0:22:54.17:0,54,838	0/0:28,0:28:54.14:0,54,785	0/0:32,0:32:43.23:0,43,883	0/0:12,0:12:21.07:0,21,332	0/0:20,0:19:33.09:0,33,486	0/0:16,0:16:36.12:0,36,576	0/0:28,0:27:57.16:0,57,857	1/1:6,14:22:33.11:757,33,0	1/1:4,10:15:30.01:717,30,0	1/1:5,15:20:33.11:760,33,0	0/0:16,0:16:24.06:0,24,340	0/0:26,0:26:30.21:0,30,659	0/0:45,0:45:99:0,99,1560	0/0:10,0:10:15.03:0,15,216
chr10	60194506	.	TTCTC	T	1856.21	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=9.553;DP=710;FS=2.008;HRun=0;HaplotypeScore=110.7668;InbreedingCoeff=0.9953;MQ=85.32;MQ0=0;MQRankSum=-3.496;QD=45.27;ReadPosRankSum=-5.644;VQSLOD=2.7900;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:21.50:0,22,1464	0/0:9,0:9:27.09:0,27,718	0/0:25,0:23:62.39:0,62,1432	0/0:22,0:22:46.51:0,47,1213	0/0:27,0:26:78.25:0,78,1987	0/0:27,0:27:81.28:0,81,2128	0/0:17,0:17:51.15:0,51,1303	1/1:0,41:41:99:1951,120,0	0/0:26,0:26:78.25:0,78,1996	0/0:31,0:31:87.29:0,87,2240	0/0:28,0:28:84.29:0,84,2191	0/0:20,0:20:57.16:0,57,1408	0/0:31,0:31:84.29:0,84,2226	0/0:32,0:32:93.32:0,93,2476	0/0:39,0:39:99:0,114,2892	0/0:28,0:28:78.27:0,78,2105	0/0:19,0:19:54.19:0,54,1458	0/0:19,0:19:57.11:0,57,1364	0/0:15,0:15:42.12:0,42,1076	0/0:28,0:28:78.27:0,78,2096	0/0:21,0:21:60.16:0,60,1466	0/0:29,0:29:84.27:0,84,2171	0/0:30,0:30:84.27:0,84,2190	0/0:16,0:16:45.15:0,45,1205	0/0:36,0:36:99:0,108,2814	0/0:28,0:28:84.27:0,84,2198	0/0:29,0:29:84.19:0,84,2145	0/0:14,0:14:42.13:0,42,1057
chr10	60195147	.	G	GA	12699.71	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-13.771;DP=662;FS=1.452;HRun=6;HaplotypeScore=66.8856;InbreedingCoeff=0.9877;MQ=69.57;MQ0=0;MQRankSum=-2.518;QD=30.53;ReadPosRankSum=4.979;VQSLOD=5.2543;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,16:19:48.15:604,48,0	1/1:2,10:12:24.08:302,24,0	0/0:39,0:32:70.25:0,70,645	0/0:31,0:22:48.91:0,49,452	1/1:3,22:25:66.21:830,66,0	0/0:21,0:21:57.11:0,57,575	0/0:16,1:17:7.43:0,7,391	0/0:34,0:34:84.17:0,84,852	1/1:5,18:23:39.09:474,39,0	1/1:2,23:25:69.22:866,69,0	1/1:3,35:38:99:1200,99,0	0/0:23,0:23:60.11:0,60,605	0/0:14,0:14:39.09:0,39,398	1/1:1,15:16:36.12:453,36,0	1/1:4,23:27:63.20:793,63,0	1/1:2,23:25:66.21:830,66,0	1/1:4,20:24:54.17:679,54,0	1/1:2,12:14:34.27:425,34,0	1/1:4,15:19:45.14:564,45,0	1/1:1,28:28:78.25:981,78,0	1/1:5,14:19:36.12:453,36,0	0/0:23,0:23:63.11:0,63,629	0/0:24,0:24:72.15:0,72,728	0/0:19,0:19:54.12:0,54,551	1/1:2,17:19:45.14:566,45,0	1/1:1,22:23:63.20:793,63,0	1/1:3,35:38:99:1283,102,0	1/1:0,21:21:48.15:604,48,0
chr10	60195214	.	GA	G	609.04	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.381;DP=569;FS=2.793;HRun=7;HaplotypeScore=65.9166;InbreedingCoeff=0.9975;MQ=85.82;MQ0=0;MQRankSum=-1.245;QD=24.36;ReadPosRankSum=-3.694;VQSLOD=2.5676;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:60.14:0,60,724	0/0:15,0:15:39.12:0,39,490	0/0:24,0:24:68.93:0,69,784	0/0:15,0:15:26.44:0,26,285	0/0:37,0:37:99:0,99,1245	0/0:28,0:28:81.24:0,81,997	0/0:12,0:12:33.11:0,33,415	1/1:1,24:25:69.16:704,69,0	0/0:19,0:19:54.17:0,54,679	0/0:24,0:24:66.18:0,66,814	0/0:31,0:31:81.26:0,81,1014	0/0:15,0:15:45.14:0,45,566	0/0:12,0:12:36.08:0,36,416	0/0:13,0:13:33.11:0,33,415	0/0:14,0:14:33.08:0,33,401	0/0:23,0:23:57.18:0,57,714	0/0:26,0:26:75.21:0,75,926	0/0:15,0:15:42.13:0,42,528	0/0:25,0:25:75.22:0,75,921	0/0:32,0:32:96.30:0,96,1196	0/0:14,0:14:39.12:0,39,491	0/0:14,0:14:42.13:0,42,528	0/0:24,0:24:69.20:0,69,854	0/0:13,0:13:36.12:0,36,453	0/0:15,0:15:39.12:0,39,491	0/0:22,0:22:57.14:0,57,699	0/0:18,0:18:39.11:0,39,476	0/0:22,0:22:57.18:0,57,717
chr10	60196068	.	T	TC	262.06	PASS	AC=2;AF=0.038;AN=52;BaseQRankSum=-4.129;DP=875;FS=15.178;HRun=5;HaplotypeScore=60.5666;InbreedingCoeff=0.7215;MQ=39.68;MQ0=131;MQRankSum=-4.109;QD=20.16;ReadPosRankSum=-2.414;VQSLOD=1.6425;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:30:30.07:0,30,322	0/0:12,0:8:2.99:0,3,32	./.	./.	0/0:25,0:21:21.05:0,21,223	0/0:22,0:18:27.07:0,27,290	0/0:35,0:21:33.05:0,33,354	1/1:2,11:10:27.09:355,27,0	0/0:34,0:28:30.05:0,30,314	0/0:29,0:18:45.10:0,45,473	0/0:21,0:17:9.01:0,9,90	0/0:46,0:43:50.94:0,51,548	0/0:35,0:24:36.04:0,36,374	0/0:62,0:55:56.92:0,57,603	0/0:57,0:52:84.21:0,84,903	0/0:40,0:34:39.08:0,39,411	0/0:28,0:24:45.11:0,45,484	0/0:20,0:14:33.08:0,33,355	0/0:18,0:9:27.07:0,27,290	0/0:13,0:8:12.03:0,12,129	0/0:94,0:68:65.51:0,66,709	0/0:23,0:17:24.06:0,24,258	0/0:15,0:9:11.99:0,12,117	0/0:48,0:38:59.85:0,60,645	0/0:17,0:11:21.05:0,21,226	0/0:30,0:15:24.05:0,24,258	0/0:22,0:20:21.05:0,21,226	0/0:7,0:6:9.02:0,9,97
chr10	60196678	.	TTGTGAA	T	6140.44	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=13.506;DP=552;FS=9.681;HRun=0;HaplotypeScore=117.6645;InbreedingCoeff=0.9844;MQ=80.01;MQ0=0;MQRankSum=-13.964;QD=44.50;ReadPosRankSum=-0.135;VQSLOD=4.4350;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:24:66.23:0,66,2214	0/0:5,0:5:12.04:0,12,418	0/0:18,0:18:51.18:0,51,1592	0/0:23,0:23:53.13:0,53,1563	0/0:22,0:22:63.22:0,63,2157	1/1:1,15:16:33.11:754,33,0	1/1:2,20:21:51.17:1107,51,0	1/1:3,13:16:39.12:832,39,0	0/0:19,0:19:54.19:0,54,1818	0/0:25,0:25:69.23:0,69,2204	0/0:22,0:22:63.22:0,63,2156	1/1:3,21:24:45.12:980,45,0	1/1:2,12:14:33.11:754,33,0	0/0:24,0:24:54.19:0,54,1846	0/0:22,0:21:60.19:0,60,1922	0/0:22,0:22:54.19:0,54,1876	0/0:34,0:34:96.31:0,96,3166	0/0:4,0:4:12.04:0,12,418	0/0:20,0:20:57.20:0,57,1946	0/0:18,0:18:54.19:0,54,1795	0/0:20,0:20:51.17:0,51,1666	1/1:1,12:13:29.97:539,30,0	1/1:1,17:18:45.07:901,45,0	1/1:3,12:14:12.04:274,12,0	0/0:22,0:22:57.18:0,57,1858	0/0:30,0:30:87.30:0,87,3002	0/0:19,0:19:57.16:0,57,1825	0/0:20,0:20:57.20:0,57,1986
chr10	60196778	.	GAC	G	446.30	PASS	AB=0.969;AC=28;AF=0.538;AN=52;BaseQRankSum=0.879;DP=631;FS=16.728;HRun=0;HaplotypeScore=102.3043;InbreedingCoeff=-0.1119;MQ=49.77;MQ0=38;MQRankSum=-0.028;QD=1.00;ReadPosRankSum=0.470;VQSLOD=1.0240;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:39,1:37:14.55:15,0,51	1/1:5,0:5:3:26,3,0	./.	./.	0/1:28,0:26:0.03:0,0,0	0/0:14,1:15:6.42:0,6,43	0/1:23,2:20:21.13:21,0,32	0/1:23,0:18:0.03:0,0,0	1/1:18,0:18:2.96:19,3,0	0/1:20,1:20:31.74:32,0,56	0/1:25,0:25:4.61:5,0,8	0/1:31,0:31:0:0,0,0	1/1:16,0:15:3.27:14,3,0	1/1:16,0:15:2.97:20,3,0	0/0:32,0:32:1.45:0,1,6	1/1:21,0:20:8.56:50,9,0	0/1:27,3:27:45.29:152,0,45	0/1:23,0:22:8.68:29,0,9	0/1:10,1:11:19.88:22,0,20	1/1:20,0:20:2.04:6,2,0	0/0:26,2:22:2.88:0,3,16	0/0:15,0:13:5.73:0,6,44	0/0:21,1:19:12.56:0,13,76	0/1:28,2:24:18.66:19,0,43	1/1:14,2:12:6.02:64,6,0	0/1:15,1:15:25.02:25,0,35	0/1:17,0:15:34.67:52,0,35	0/1:13,0:13:8.07:13,0,8
chr10	60196825	.	ACGCACG	A	6501.84	PASS	AB=0.919;AC=41;AF=0.732;AN=56;BaseQRankSum=-2.212;DP=549;FS=36.770;HRun=0;HaplotypeScore=119.8497;InbreedingCoeff=0.0754;MQ=50.13;MQ0=38;MQRankSum=1.018;QD=12.53;ReadPosRankSum=3.912;VQSLOD=1.9636;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:34,0:31:14.35:490,0,14	1/1:7,0:7:18.06:259,18,0	0/0:12,0:6:18.05:0,18,239	0/0:18,0:6:7.17:0,7,102	0/1:25,0:23:0:0,0,0	1/1:20,0:19:22.73:383,23,0	0/1:22,0:18:20.60:244,0,21	0/1:4,12:15:2.40:367,0,2	1/1:13,0:13:3.01:52,3,0	1/1:5,14:18:37.49:504,37,0	1/1:20,0:20:8.48:73,8,0	0/1:22,0:21:0.08:0,0,0	1/1:19,0:19:6.02:87,6,0	1/1:22,0:21:3.48:53,3,0	1/1:24,0:24:6.01:72,6,0	1/1:18,0:17:11.25:161,11,0	1/1:23,0:20:10.80:513,11,0	1/1:24,0:23:25.64:622,26,0	1/1:14,0:14:26.84:343,27,0	1/1:17,0:17:6.49:73,6,0	0/1:28,0:20:0.73:380,0,1	0/1:18,0:13:12.26:12,0,22	0/1:18,0:15:18.04:275,0,18	0/1:27,0:24:18.10:351,0,18	1/1:14,0:10:17.26:233,17,0	0/1:3,20:22:41.28:652,0,41	0/1:13,0:9:3.41:239,0,3	1/1:19,0:18:5.81:65,6,0
chr10	60198293	.	TC	T	2997.53	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=9.854;DP=525;FS=21.267;HRun=7;HaplotypeScore=53.0349;InbreedingCoeff=0.9969;MQ=89.37;MQ0=0;MQRankSum=-1.298;QD=23.06;ReadPosRankSum=1.590;VQSLOD=2.0333;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:95.81:0,96,1503	0/0:6,0:6:15.04:0,15,177	0/0:22,0:22:57.18:0,57,706	0/0:18,0:18:33.10:0,33,400	0/0:28,0:28:75.22:0,75,917	1/1:2,10:12:30.07:306,30,0	1/1:3,11:14:30.07:306,30,0	1/1:1,14:15:36.06:361,36,0	0/0:17,0:17:42.13:0,42,528	0/0:20,0:20:48.15:0,48,594	0/0:24,0:24:60.19:0,60,754	1/1:2,16:18:45.10:459,45,0	1/1:2,22:24:57.13:581,57,0	0/0:18,0:18:54.17:0,54,679	0/0:23,0:23:63.19:0,63,780	0/0:12,0:12:33.11:0,33,415	0/0:21,0:21:54.17:0,54,679	0/0:18,0:18:45.14:0,45,565	0/0:20,0:20:51.16:0,51,642	0/0:22,0:22:66.18:0,66,804	0/0:14,0:14:33.11:0,33,415	1/1:0,12:12:33.07:336,33,0	1/1:0,16:16:42.09:428,42,0	1/1:2,17:19:42.10:429,42,0	0/0:20,0:20:54.17:0,54,679	0/0:21,0:21:57.09:0,57,662	0/0:14,0:14:42.12:0,42,516	0/0:11,0:11:33.11:0,33,413
chr10	60198497	.	T	TA	5006.01	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-13.148;DP=491;FS=10.375;HRun=1;HaplotypeScore=42.7680;InbreedingCoeff=0.9579;MQ=69.52;MQ0=0;MQRankSum=-0.444;QD=42.42;ReadPosRankSum=-1.099;VQSLOD=3.7830;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:45.15:0,45,629	0/0:12,0:12:33.11:0,33,462	0/0:10,0:10:30.01:0,30,358	0/0:7,0:6:0.50:0,1,76	0/0:36,0:36:99:0,108,1504	1/1:0,20:20:54.18:863,54,0	1/1:0,12:12:30.10:480,30,0	1/1:1,24:25:69.22:1079,69,0	0/0:16,0:16:48.15:0,48,656	0/0:28,0:27:78.26:0,78,1087	0/0:26,0:26:75.25:0,75,1047	1/1:1,12:13:30.10:478,30,0	1/1:0,10:10:30.10:480,30,0	0/0:20,0:20:54.17:0,54,737	0/0:18,0:18:54.17:0,54,738	0/0:13,0:13:39.13:0,39,546	0/0:25,0:25:75.20:0,75,1009	0/0:20,0:20:60.20:0,60,839	0/0:21,0:21:54.18:0,54,753	0/0:24,0:24:72.24:0,72,1005	0/0:10,0:10:30.07:0,30,399	1/1:0,10:10:24.08:381,24,0	1/1:0,20:20:57.19:911,57,0	1/1:0,8:8:21.07:334,21,0	0/0:20,0:20:57.19:0,57,795	0/0:23,0:23:66.20:0,66,891	0/0:18,0:18:54.18:0,54,753	0/0:11,0:11:33.11:0,33,462
chr10	60199341	.	AC	A	3826.58	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=14.586;DP=615;FS=3.700;HRun=8;HaplotypeScore=67.8553;InbreedingCoeff=0.9943;MQ=81.03;MQ0=0;MQRankSum=0.072;QD=22.25;ReadPosRankSum=-1.331;VQSLOD=3.6550;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:84.26:0,84,1015	0/0:9,0:9:27.06:0,27,311	0/0:16,0:16:33.09:0,33,379	0/0:15,0:15:22.45:0,22,226	0/0:20,0:20:57.17:0,57,688	1/1:1,21:22:60.10:579,60,0	1/1:3,14:17:27.04:261,27,0	1/1:10,32:42:87.06:873,87,0	0/0:23,0:23:69.21:0,69,833	0/0:28,0:28:81.22:0,81,943	0/0:29,0:29:78.21:0,78,911	1/1:7,14:21:39.05:376,39,0	1/1:3,15:18:42.06:405,42,0	0/0:25,0:25:48.69:0,49,799	0/0:23,0:23:66.18:0,66,776	0/0:30,0:30:88.51:0,89,1054	0/0:28,0:28:72.19:0,72,837	0/0:7,0:7:21.06:0,21,254	0/0:16,1:17:13.15:0,13,442	0/0:24,0:24:66.18:0,66,775	0/0:29,0:29:87.20:0,87,1002	1/1:4,12:16:39.05:376,39,0	1/1:1,23:24:63.10:608,63,0	1/1:1,11:12:36.06:348,36,0	0/0:24,0:24:69.14:0,69,769	0/0:25,0:25:69.68:0,70,834	0/0:26,0:26:69.21:0,69,832	0/0:13,0:13:39.10:0,39,458
chr10	60203940	.	T	TAAAGGAA	955.99	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.679;DP=669;FS=1.129;HRun=0;HaplotypeScore=152.8239;InbreedingCoeff=0.9936;MQ=85.11;MQ0=0;MQRankSum=-3.144;QD=79.67;ReadPosRankSum=-1.607;VQSLOD=3.6900;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:49:99:0,148,4079	0/0:7,0:7:21.07:0,21,561	0/0:16,0:16:45.13:0,45,1108	0/0:28,0:28:72.16:0,72,1647	0/0:13,0:13:36.12:0,36,926	0/0:22,0:22:63.18:0,63,1654	0/0:31,0:31:87.28:0,87,2296	1/1:3,9:12:36.08:1051,36,0	0/0:22,0:22:66.23:0,66,1805	0/0:21,0:21:54.18:0,54,1373	0/0:18,0:18:54.19:0,54,1481	0/0:33,0:33:99:0,99,2718	0/0:30,0:30:90.30:0,90,2374	0/0:36,0:36:99:0,108,2831	0/0:34,0:34:99:0,102,2826	0/0:31,0:31:93.29:0,93,2406	0/0:31,0:31:93.30:0,93,2468	0/0:26,0:26:78.23:0,78,2004	0/0:24,0:24:69.23:0,69,1771	0/0:22,0:22:66.23:0,66,1826	0/0:35,0:35:99:0,102,2611	0/0:17,0:17:51.18:0,51,1393	0/0:13,0:13:39.13:0,39,1073	0/0:20,0:20:60.21:0,60,1621	0/0:15,0:15:42.13:0,42,1117	0/0:20,0:20:60.20:0,60,1584	0/0:33,0:32:96.30:0,96,2518	0/0:9,0:9:24.04:0,24,596
chr10	60203941	.	C	CAGA	887.64	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.878;DP=670;FS=0.000;HRun=0;HaplotypeScore=99.7907;InbreedingCoeff=0.9937;MQ=83.22;MQ0=0;MQRankSum=-7.206;QD=42.27;ReadPosRankSum=-1.469;VQSLOD=4.3806;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:49:99:0,147,2699	0/0:7,0:7:21.07:0,21,391	0/0:14,0:14:39.13:0,39,712	0/0:27,0:27:72.13:0,72,1192	0/0:13,0:13:36.12:0,36,669	0/0:22,0:22:66.14:0,66,1143	0/0:32,0:32:93.28:0,93,1649	1/1:12,9:21:54.18:983,54,0	0/0:22,0:22:66.21:0,66,1198	0/0:19,0:19:57.14:0,57,942	0/0:18,0:18:54.19:0,54,1000	0/0:34,0:34:99:0,99,1812	0/0:29,0:29:87.28:0,87,1582	0/0:36,0:36:99:0,105,1885	0/0:34,0:34:99:0,102,1901	0/0:31,0:31:87.28:0,87,1590	0/0:32,0:32:90.25:0,90,1611	0/0:26,0:26:78.27:0,78,1436	0/0:23,0:23:69.24:0,69,1256	0/0:22,0:22:66.22:0,66,1199	0/0:34,0:34:93.32:0,93,1724	0/0:17,0:17:51.17:0,51,941	0/0:13,0:13:39.13:0,39,716	0/0:20,0:20:60.15:0,60,1049	0/0:15,0:15:42.11:0,42,748	0/0:19,0:19:57.19:0,57,1033	0/0:31,0:30:93.32:0,93,1717	0/0:9,0:9:24.08:0,24,430
chr10	60205128	.	G	GA	2036.90	PASS	AB=0.947;AC=17;AF=0.304;AN=56;BaseQRankSum=1.436;DP=384;FS=7.314;HRun=9;HaplotypeScore=41.9467;InbreedingCoeff=0.8107;MQ=79.25;MQ0=1;MQRankSum=0.672;QD=18.52;ReadPosRankSum=-1.128;VQSLOD=3.0348;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:14,1:15:8.81:0,9,305	0/0:9,0:9:23.99:0,24,208	0/0:11,0:10:8.17:0,8,96	0/0:10,0:10:3.83:0,4,90	0/0:21,0:22:59:0,59,497	1/1:1,16:19:47.80:493,48,0	1/1:0,6:6:15.04:166,15,0	1/1:6,22:28:63.15:681,63,0	0/0:3,0:3:9:0,9,78	0/0:17,0:17:47.92:0,48,408	0/1:17,1:18:9.21:9,0,339	1/1:1,7:8:18.05:199,18,0	1/1:1,9:10:4.68:273,5,0	0/0:17,0:17:7.54:0,8,232	0/0:11,0:11:29.98:0,30,256	0/0:13,0:13:35.99:0,36,313	0/0:23,0:23:68.99:0,69,599	0/0:13,0:13:29.97:0,30,260	0/0:15,0:16:44.01:0,44,367	0/0:16,0:16:41.98:0,42,365	0/0:9,0:9:23.99:0,24,208	1/1:4,5:10:14.87:147,15,0	1/1:3,1:4:6.02:65,6,0	1/1:1,6:7:18.05:199,18,0	0/0:20,0:20:53.97:0,54,465	0/0:12,0:12:35.99:0,36,312	0/0:17,0:17:50.97:0,51,439	0/0:20,0:20:59.99:0,60,521
chr10	60206417	.	GGTGT	G	1976.86	PASS	AB=0.964;AC=18;AF=0.346;AN=52;BaseQRankSum=3.315;DP=458;FS=12.413;HRun=0;HaplotypeScore=79.4759;InbreedingCoeff=0.7503;MQ=47.18;MQ0=57;MQRankSum=-2.315;QD=11.43;ReadPosRankSum=1.773;VQSLOD=1.9051;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:18:39.07:0,39,668	0/0:9,0:9:15.05:0,15,282	./.	0/0:26,0:1:0.47:0,0,1	0/0:12,0:12:21.96:0,22,420	1/1:12,12:24:33.11:528,33,0	1/1:14,6:12:15.13:262,15,0	1/1:27,2:14:18.06:285,18,0	0/1:12,1:12:24.89:25,0,414	0/0:11,0:12:15.05:0,15,284	0/0:15,0:15:16.08:0,16,681	1/1:5,6:12:7.82:273,8,0	1/1:5,10:15:21.07:313,21,0	0/0:13,0:13:28.04:0,28,584	0/0:14,0:13:22.40:0,22,499	0/0:17,0:17:33.10:0,33,694	0/1:19,0:17:21.13:21,0,406	0/0:17,0:17:33.03:0,33,626	./.	0/0:13,0:12:15.94:0,16,348	0/0:22,0:19:41.93:0,42,805	1/1:6,5:12:8.92:144,9,0	1/1:8,1:9:12.04:174,12,0	1/1:11,4:9:9.03:143,9,0	0/0:17,0:16:18.02:0,18,376	0/0:23,0:23:46.66:0,47,891	0/0:20,0:19:32.22:0,32,522	0/0:8,0:7:15.05:0,15,305
chr10	60206454	.	GA	G	1126.61	PASS	AB=0.887;AC=24;AF=0.429;AN=56;BaseQRankSum=1.621;DP=382;FS=0.000;HRun=1;HaplotypeScore=69.9100;InbreedingCoeff=-0.1182;MQ=62.69;MQ0=20;MQRankSum=-3.469;QD=4.45;ReadPosRankSum=-1.767;VQSLOD=-0.5565;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:8:5.98:0,6,50	0/0:2,0:2:5.90:0,6,40	0/0:24,0:11:20.19:0,20,221	0/0:36,0:11:5.74:0,6,102	0/1:7,3:10:32.62:112,0,33	0/1:28,0:26:19.43:111,0,19	1/1:11,0:8:5.50:74,5,0	0/1:18,0:11:19.92:67,0,20	0/1:9,2:11:23.22:23,0,63	0/1:8,0:7:2.66:3,0,53	0/0:6,0:6:15.42:0,15,148	1/1:13,0:13:20.97:140,21,0	1/1:16,0:15:11.78:106,12,0	0/1:11,4:15:27.33:64,0,27	0/1:14,2:15:63.80:64,0,108	0/1:15,4:19:37.99:202,0,38	0/1:11,2:11:26.09:76,0,26	0/0:17,0:16:23.58:0,24,192	1/1:5,0:3:8.69:77,9,0	0/0:7,1:7:3.14:0,3,79	0/1:16,1:15:50.10:50,0,127	0/0:16,0:16:2.51:0,3,15	1/1:2,3:5:2.94:18,3,0	0/1:13,0:6:11.61:26,0,12	0/0:8,0:8:5.92:0,6,43	0/1:9,6:15:39.12:39,0,124	0/1:14,1:13:36.90:40,0,37	0/1:4,1:5:0.19:0,0,31
chr10	60206455	.	A	AG	3073.19	PASS	AB=0.909;AC=45;AF=0.804;AN=56;BaseQRankSum=1.102;DP=397;FS=31.127;HRun=9;HaplotypeScore=75.4506;InbreedingCoeff=0.2272;MQ=62.95;MQ0=20;MQRankSum=-2.311;QD=9.43;ReadPosRankSum=-0.034;VQSLOD=0.2347;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,5:9:2.98:21,3,0	1/1:1,1:2:3.01:33,3,0	0/0:25,0:11:20.95:0,21,173	0/0:39,0:13:3.88:0,4,86	1/1:8,0:9:17.89:163,18,0	1/1:27,0:25:50.77:408,51,0	1/1:11,0:8:20.76:147,21,0	1/1:20,0:12:26.71:191,27,0	1/1:9,2:11:12.03:133,12,0	1/1:8,1:7:3.48:11,3,0	0/0:7,0:7:6.47:0,6,53	1/1:12,0:12:29.77:247,30,0	1/1:16,0:15:29.85:242,30,0	1/1:11,2:13:21.49:209,21,0	0/1:16,1:15:20.02:130,0,20	1/1:17,2:18:38.16:350,38,0	1/1:12,3:12:22.25:210,22,0	0/1:6,12:16:10.95:116,0,11	1/1:3,4:5:9.02:99,9,0	0/1:8,0:7:20.04:27,0,20	0/1:17,0:15:42.96:43,0,56	1/1:15,0:15:14.50:107,15,0	1/1:5,0:5:2.94:18,3,0	1/1:13,0:6:8.89:60,9,0	1/1:5,6:11:3.01:33,3,0	0/1:16,0:15:8.26:101,0,8	1/1:7,10:14:6.01:62,6,0	1/1:4,1:5:6.49:67,6,0
chr10	60206460	.	G	GC	2670.53	PASS	AB=1.000;AC=28;AF=0.500;AN=56;BaseQRankSum=2.548;DP=398;FS=110.423;HRun=0;HaplotypeScore=64.8647;InbreedingCoeff=0.2950;MQ=64.48;MQ0=17;MQRankSum=-2.097;QD=10.81;ReadPosRankSum=6.310;VQSLOD=0.5092;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:10:10.75:0,11,69	1/1:1,0:1:2.22:7,2,0	0/0:27,0:12:19.92:0,20,280	0/0:40,0:15:24.96:0,25,143	0/1:8,0:8:4.49:4,0,43	1/1:2,25:25:56.53:748,57,0	1/1:1,12:10:24:298,24,0	1/1:5,21:20:26.12:371,26,0	0/1:13,0:13:6.32:6,0,75	0/0:8,0:6:8.62:0,9,58	0/0:4,0:4:9.02:0,9,109	1/1:3,10:13:33.08:421,33,0	1/1:0,17:16:44.73:501,45,0	0/1:13,0:13:7.93:8,0,54	0/0:17,0:15:10.83:0,11,217	0/1:17,0:16:5.56:6,0,77	0/1:15,0:13:19.33:19,0,82	0/1:18,0:16:10.99:11,0,91	0/1:8,0:7:9.12:9,0,81	0/1:6,0:5:1.96:2,0,37	0/0:16,0:15:23.35:0,23,260	1/1:1,14:15:24:233,24,0	1/1:4,1:5:6:68,6,0	1/1:2,10:5:11.79:129,12,0	0/0:11,0:11:1.85:0,2,47	0/0:14,0:13:4.86:0,5,121	0/1:14,0:12:8.37:8,0,19	0/1:5,0:5:3.96:4,0,39
chr10	60207534	.	G	GA	7814.39	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-17.588;DP=779;FS=18.137;HRun=2;HaplotypeScore=67.2649;InbreedingCoeff=0.9998;MQ=59.81;MQ0=5;MQRankSum=1.718;QD=39.07;ReadPosRankSum=3.827;VQSLOD=3.1179;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,104,1424	0/0:9,0:9:27.06:0,27,319	0/0:23,0:15:45.14:0,45,554	0/0:26,0:20:51.10:0,51,610	0/0:40,0:40:99:0,114,1401	1/1:0,30:30:78.26:1123,78,0	1/1:3,18:21:54.18:778,54,0	0/0:36,0:35:96.26:0,96,1145	0/0:19,0:19:51.14:0,51,619	0/0:26,0:26:78.25:0,78,966	0/0:28,0:28:84.25:0,84,1028	1/1:0,33:33:84.28:1210,84,0	1/1:1,20:21:54.18:778,54,0	0/0:19,0:19:57.18:0,57,707	0/0:26,0:26:78.23:0,78,955	0/0:27,0:27:75.24:0,75,930	0/0:25,0:25:72.23:0,72,892	0/0:18,0:18:48.15:0,48,594	0/0:24,0:23:63.18:0,63,765	0/0:44,0:44:99:0,129,1598	0/0:35,0:35:99:0,105,1272	1/1:4,30:34:93.31:1334,93,0	1/1:1,26:27:78.26:1123,78,0	1/1:0,34:34:99:1469,102,0	0/0:26,0:26:78.25:0,78,967	0/0:33,0:33:96.29:0,96,1179	0/0:37,0:37:99:0,108,1326	0/0:14,0:14:39.12:0,39,484
chr10	60208191	.	G	GA	5178.36	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=15.778;DP=592;FS=1.261;HRun=1;HaplotypeScore=84.0349;InbreedingCoeff=0.9986;MQ=57.63;MQ0=12;MQRankSum=-3.862;QD=32.57;ReadPosRankSum=0.437;VQSLOD=4.5600;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:87.28:0,87,1130	0/0:11,0:11:33.11:0,33,429	0/0:24,0:10:26.86:0,27,310	0/0:21,0:10:27.08:0,27,339	0/0:23,0:22:63.20:0,63,818	1/1:1,19:19:54.18:809,54,0	1/1:1,10:11:27.01:354,27,0	1/1:5,16:18:42.14:629,42,0	0/0:11,0:11:33.11:0,33,428	0/0:23,0:23:69.22:0,69,896	0/0:12,0:12:36.12:0,36,467	1/1:3,14:17:30.10:449,30,0	1/1:1,24:25:60.12:849,60,0	0/0:18,0:18:54.18:0,54,701	0/0:31,0:31:87.27:0,87,1114	0/0:15,0:15:45.15:0,45,584	0/0:24,0:24:69.21:0,69,880	0/0:24,0:24:66.18:0,66,839	0/0:22,0:22:66.20:0,66,843	0/0:26,0:26:78.24:0,78,999	0/0:16,0:16:45.13:0,45,569	1/1:6,20:26:54.14:784,54,0	1/1:1,20:21:42.14:629,42,0	1/1:1,17:18:45.15:674,45,0	0/0:26,0:26:78.25:0,78,1013	0/0:31,0:31:93.30:0,93,1208	0/0:38,0:38:99:0,111,1426	0/0:7,0:7:21.07:0,21,273
chr10	60208338	.	T	TA	7446.75	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=-14.259;DP=622;FS=0.000;HRun=1;HaplotypeScore=58.4951;InbreedingCoeff=0.9387;MQ=75.06;MQ0=0;MQRankSum=-0.834;QD=39.82;ReadPosRankSum=-1.388;VQSLOD=4.7624;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:87.27:0,87,1195	0/0:8,0:8:24.08:0,24,334	0/0:12,0:12:30.10:0,30,403	0/1:10,0:11:3.60:4,0,268	0/0:32,0:32:90.28:0,90,1238	1/1:1,21:22:63.21:1007,63,0	1/1:0,16:16:45.15:719,45,0	1/1:0,40:39:99:1836,117,0	0/0:15,0:15:45.13:0,45,610	0/0:33,0:33:99:0,99,1370	0/0:29,0:29:87.29:0,87,1213	1/1:0,8:8:18.06:288,18,0	1/1:0,24:24:63.21:1003,63,0	0/0:25,0:25:75.23:0,75,1027	0/0:26,0:26:75.25:0,75,1049	0/0:11,0:11:33.10:0,33,443	0/0:16,0:16:48.16:0,48,671	0/0:10,0:10:30.10:0,30,415	0/0:24,0:24:69.22:0,69,951	0/0:29,0:29:87.29:0,87,1213	0/0:17,0:17:51.17:0,51,713	1/1:1,24:25:63.21:1007,63,0	1/1:0,26:26:57.19:911,57,0	1/1:1,14:15:42.14:671,42,0	0/0:37,0:37:99:0,111,1552	0/0:30,0:30:90.30:0,90,1257	0/0:31,0:31:93.31:0,93,1293	0/0:20,0:20:60.20:0,60,839
chr10	60209347	.	CTT	C	8271.43	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=18.223;DP=732;FS=0.000;HRun=4;HaplotypeScore=108.4601;InbreedingCoeff=0.9948;MQ=88.90;MQ0=0;MQRankSum=-7.209;QD=38.29;ReadPosRankSum=1.011;VQSLOD=3.8061;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:72.23:0,72,1298	0/0:12,0:12:36.12:0,36,675	0/0:38,0:39:32.59:0,33,1350	0/0:26,0:26:56.32:0,56,1057	0/0:22,0:22:66.23:0,66,1230	1/1:1,24:25:57.19:832,57,0	1/1:1,17:18:45.15:662,45,0	1/1:3,33:36:99:1419,99,0	0/0:21,0:21:60.21:0,60,1120	0/0:35,0:35:99:0,99,1853	0/0:33,0:33:96.31:0,96,1736	1/1:1,34:35:93.31:1362,93,0	1/1:1,26:27:72.24:1038,72,0	0/0:19,0:19:57.20:0,57,1062	0/0:36,0:36:99:0,108,1994	0/0:26,0:26:75.24:0,75,1346	0/0:23,0:23:66.21:0,66,1203	0/0:4,0:4:12.04:0,12,225	0/0:33,0:33:99:0,99,1786	0/0:32,0:32:96.33:0,96,1788	0/0:25,0:25:72.24:0,72,1319	1/1:2,25:27:72.24:1035,72,0	1/1:0,31:31:90.22:1289,90,0	1/1:0,17:17:45.07:635,45,0	0/0:35,0:35:99:0,105,1918	0/0:22,0:22:63.21:0,63,1151	0/0:28,0:28:84.29:0,84,1574	0/0:21,0:21:57.20:0,57,1053
chr10	60209653	.	G	GTATGTATGTATA	710.26	PASS	AB=0.722;AC=13;AF=0.232;AN=56;BaseQRankSum=-1.140;DP=748;FS=1.813;HRun=0;HaplotypeScore=238.1268;InbreedingCoeff=0.5639;MQ=68.32;MQ0=15;MQRankSum=-0.179;QD=3.43;ReadPosRankSum=-1.443;VQSLOD=2.6570;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:40.86:0,41,1097	0/0:8,0:8:17.13:0,17,107	0/0:34,0:18:24.01:0,24,221	0/0:32,0:19:10:0,10,119	0/0:31,0:31:77.96:0,78,1258	1/1:4,24:32:3.01:179,3,0	1/1:21,0:21:26.97:278,27,0	0/0:45,0:42:79.67:0,80,715	0/0:28,0:27:78.07:0,78,1885	0/1:19,0:19:23.38:23,0,212	0/0:20,0:20:36.08:0,36,199	1/1:4,28:44:2.73:163,3,0	1/1:6,14:26:3.01:179,3,0	0/0:39,0:37:76.34:0,76,825	0/0:39,0:38:32.59:0,33,482	0/0:31,0:31:68.09:0,68,510	0/0:16,0:16:29.18:0,29,201	0/1:14,0:14:28.14:28,0,368	0/0:23,0:22:48.02:0,48,869	0/0:23,0:23:63.01:0,63,1073	0/0:29,0:29:59.80:0,60,1451	0/1:3,4:12:0:0,0,0	0/1:2,15:20:0:0,0,0	0/1:1,16:18:0:1,0,0	0/0:35,0:34:69.81:0,70,402	0/0:33,0:33:83.89:0,84,2166	0/0:28,0:28:68.98:0,69,1403	0/0:16,0:16:36.03:0,36,874
chr10	60210100	.	GGTGT	G	1637.62	PASS	AB=0.624;AC=28;AF=0.538;AN=52;BaseQRankSum=-2.899;DP=375;FS=17.695;HRun=0;HaplotypeScore=62.0950;InbreedingCoeff=0.4257;MQ=47.45;MQ0=49;MQRankSum=0.684;QD=8.27;ReadPosRankSum=-1.462;VQSLOD=0.3895;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:12,8:14:6.02:94,6,0	1/1:2,0:2:3.01:36,3,0	./.	0/0:25,0:1:3.01:0,3,30	1/1:4,4:9:6.02:94,6,0	0/0:20,0:19:24.05:0,24,337	0/0:18,0:15:10.73:0,11,118	0/0:21,0:6:3.01:0,3,48	0/1:4,11:16:26.20:173,0,26	1/1:4,2:5:6.02:85,6,0	0/0:6,0:9:2.74:0,3,12	0/0:10,0:9:9.03:0,9,149	0/0:13,0:10:11.91:0,12,168	1/1:7,4:10:2.94:47,3,0	1/1:8,7:15:9.03:141,9,0	1/1:1,4:5:3.01:47,3,0	0/1:11,10:19:45.88:215,0,46	1/1:13,2:14:2.65:221,3,0	1/1:11,2:9:5.53:82,6,0	0/0:4,5:9:0.47:0,0,1	1/1:16,6:20:2.33:46,2,0	0/0:10,0:9:12.03:0,12,171	0/0:8,0:8:7.24:0,7,143	0/0:10,0:6:3.58:0,4,52	1/1:3,7:10:3.01:47,3,0	1/1:8,9:18:30.07:424,30,0	1/1:6,8:15:2.64:47,3,0	./.
chr10	60210143	.	GAGAGAGAGA	G	62.89	PASS	AC=10;AF=0.192;AN=52;BaseQRankSum=3.380;DP=303;FS=22.220;HRun=0;HaplotypeScore=93.5117;InbreedingCoeff=0.6175;MQ=63.37;MQ0=16;MQRankSum=-0.458;QD=2.03;ReadPosRankSum=-2.546;VQSLOD=-0.3092;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:18.06:0,18,705	./.	0/0:35,0:14:35.80:0,36,1272	0/0:31,0:11:24.87:0,25,722	0/0:8,0:8:14.79:0,15,554	1/1:9,3:9:2.88:15,3,0	./.	1/1:1,0:1:3.01:59,3,0	0/0:15,0:15:26.90:0,27,964	0/0:6,0:6:18.06:0,18,667	0/0:10,0:9:18.06:0,18,782	0/0:4,7:6:2.74:0,3,16	1/1:5,0:4:6.01:82,6,0	0/0:12,0:11:17.98:0,18,808	0/0:12,0:12:24.08:0,24,897	0/0:5,0:5:6.02:0,6,244	0/0:16,0:15:30.01:0,30,1080	0/0:10,0:9:27.09:0,27,874	0/0:5,0:4:12.01:0,12,397	0/0:8,0:8:9.03:0,9,361	0/0:15,0:14:23.62:0,24,1078	0/0:6,2:8:0.17:0,0,1	1/1:3,1:4:1.25:3,1,0	1/1:8,0:4:2.99:23,3,0	0/0:9,0:9:9.03:0,9,390	0/0:17,0:17:48.13:0,48,1512	0/0:17,0:17:28.04:0,28,1049	0/0:3,0:2:3.01:0,3,111
chr10	60210348	.	T	TA	8694.51	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-13.076;DP=524;FS=16.823;HRun=7;HaplotypeScore=57.0684;InbreedingCoeff=0.9951;MQ=64.41;MQ0=0;MQRankSum=0.119;QD=27.26;ReadPosRankSum=5.207;VQSLOD=3.4651;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,23:26:63.19:760,63,0	1/1:1,7:8:21.06:250,21,0	0/0:15,0:14:27.02:0,27,253	0/0:19,0:18:33.05:0,33,382	1/1:3,18:21:39.11:459,39,0	0/0:28,0:28:78.10:0,78,747	0/0:17,0:17:45.05:0,45,427	0/0:30,0:30:65.97:0,66,611	1/1:2,19:21:45.14:542,45,0	1/1:2,10:12:30.09:358,30,0	1/1:5,10:15:24.07:285,24,0	0/0:19,0:19:42.06:0,42,405	0/0:24,0:24:72.08:0,72,682	1/1:0,21:21:60.18:725,60,0	1/1:1,25:26:69.21:834,69,0	1/1:1,16:17:39.08:471,39,0	1/1:2,25:27:60.07:709,60,0	1/1:1,5:6:15.05:181,15,0	1/1:3,15:17:39.12:468,39,0	1/1:0,17:17:39.12:468,39,0	1/1:1,7:8:18.06:217,18,0	0/0:17,0:16:42.07:0,42,405	0/0:20,0:20:54.08:0,54,520	0/0:16,0:16:42.07:0,42,405	1/1:2,16:18:30.09:362,30,0	1/1:1,16:17:45.11:519,45,0	1/1:1,26:27:60.15:725,60,0	1/1:1,13:13:30.09:362,30,0
chr10	60210901	.	GTA	G	3781.90	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=11.045;DP=541;FS=25.245;HRun=0;HaplotypeScore=90.2831;InbreedingCoeff=0.9958;MQ=53.73;MQ0=11;MQRankSum=-8.452;QD=35.68;ReadPosRankSum=0.609;VQSLOD=2.8316;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:81.04:0,81,1561	0/0:16,0:16:45.15:0,45,839	0/0:24,0:15:42.13:0,42,763	0/0:28,0:21:62.50:0,63,1062	0/0:17,0:16:33.11:0,33,637	1/1:0,11:11:32.96:446,33,0	1/1:0,8:8:21.07:320,21,0	1/1:3,18:21:54.12:740,54,0	0/0:19,0:18:45.14:0,45,835	0/0:19,0:18:54.19:0,54,1042	0/0:19,0:19:51.16:0,51,952	1/1:0,15:14:33.11:503,33,0	1/1:3,15:18:36.05:521,36,0	0/0:17,0:17:45.15:0,45,867	0/0:16,0:16:42.14:0,42,809	0/0:18,0:18:54.19:0,54,1033	0/0:24,0:24:69.24:0,69,1317	0/0:19,0:19:51.11:0,51,911	0/0:24,0:22:66.22:0,66,1234	0/0:21,0:21:51.11:0,51,945	0/0:27,0:26:75.24:0,75,1413	1/1:0,13:12:36.12:549,36,0	1/1:0,9:9:24:337,24,0	1/1:0,11:11:23.96:366,24,0	0/0:24,0:24:60.21:0,60,1148	0/0:40,0:40:99:0,117,2226	0/0:26,0:26:75.26:0,75,1445	0/0:6,0:6:15.05:0,15,290
chr10	60212226	.	A	AT	1462.86	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.336;DP=438;FS=1.358;HRun=1;HaplotypeScore=51.1842;InbreedingCoeff=0.8693;MQ=76.44;MQ0=0;MQRankSum=1.029;QD=40.63;ReadPosRankSum=-4.585;VQSLOD=2.2339;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:69.20:0,69,879	0/0:5,0:5:15.05:0,15,195	0/0:9,0:9:27.06:0,27,322	0/0:8,0:8:8.52:0,9,178	0/0:20,0:20:60.18:0,60,763	0/0:22,0:22:66.19:0,66,795	0/0:8,0:8:24.07:0,24,295	1/1:0,36:36:99:1558,108,0	0/0:18,0:18:54.16:0,54,686	0/0:26,0:26:78.24:0,78,991	0/0:23,0:23:69.20:0,69,879	0/0:4,0:4:12.04:0,12,148	0/0:10,0:10:30.09:0,30,371	0/0:7,0:7:21.07:0,21,273	0/0:14,0:14:39.11:0,39,492	0/0:14,0:14:42.12:0,42,531	0/0:17,0:17:51.17:0,51,661	0/0:19,0:19:57.15:0,57,721	0/0:21,0:21:57.17:0,57,716	0/0:28,0:28:84.26:0,84,1077	0/0:11,0:11:33.11:0,33,428	0/0:6,0:6:18.06:0,18,222	0/0:20,0:20:60.17:0,60,725	0/0:6,0:6:13.94:0,14,170	0/0:8,0:8:24.08:0,24,312	0/0:14,0:14:42.14:0,42,545	0/0:31,0:30:87.28:0,87,1127	0/0:10,0:10:30.10:0,30,386
chr10	60212824	.	TGGTCAGGTCAGGTCA	T	2211.24	PASS	AB=0.958;AC=21;AF=0.389;AN=54;BaseQRankSum=2.250;DP=709;FS=0.000;HRun=0;HaplotypeScore=303.5276;InbreedingCoeff=0.6856;MQ=72.25;MQ0=5;MQRankSum=-2.788;QD=8.81;ReadPosRankSum=3.683;VQSLOD=1.5721;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:47.87:0,48,2255	1/1:5,5:10:6.02:218,6,0	0/0:32,0:22:3.01:0,3,45	0/0:68,0:42:1.86:0,2,18	0/0:12,0:12:9.03:0,9,398	0/0:19,0:19:27.09:0,27,1356	0/0:54,0:54:66.23:0,66,2560	./.	0/0:24,0:24:42.14:0,42,1994	1/1:30,1:31:16.23:421,16,0	0/0:6,2:8:0:0,0,0	0/0:22,0:22:45.15:0,45,2109	0/0:27,0:27:24.08:0,24,1282	1/1:23,2:25:8.53:213,9,0	1/1:27,2:29:5.85:116,6,0	1/1:28,3:31:10.47:406,10,0	1/1:28,0:28:21.02:413,21,0	0/0:23,0:23:54.14:0,54,2683	1/1:14,1:15:3.01:120,3,0	1/1:13,1:14:2.83:48,3,0	1/1:33,0:33:8.44:111,8,0	0/0:12,0:12:15.05:0,15,915	0/0:15,0:15:15.04:0,15,873	0/0:41,0:42:72.25:0,72,4146	1/1:12,0:12:3.01:113,3,0	0/0:25,0:25:39.12:0,39,2076	0/1:22,1:23:46.73:216,0,47	0/0:8,0:8:15.05:0,15,807
chr10	60213076	.	TGA	T	7683.99	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=17.422;DP=688;FS=4.900;HRun=0;HaplotypeScore=95.3846;InbreedingCoeff=0.9979;MQ=61.84;MQ0=0;MQRankSum=0.864;QD=39.81;ReadPosRankSum=1.207;VQSLOD=6.2548;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,105,1942	0/0:6,0:6:18.06:0,18,337	0/0:19,0:15:39.13:0,39,718	0/0:37,1:36:79.41:0,79,1693	0/0:28,0:28:81.26:0,81,1473	1/1:0,18:18:51.17:751,51,0	1/1:0,28:28:78.26:1149,78,0	1/1:3,26:29:78.26:1145,78,0	0/0:19,0:19:57.20:0,57,1068	0/0:35,0:35:99:0,105,1967	0/0:14,0:14:42.14:0,42,786	1/1:1,21:22:60.20:884,60,0	1/1:0,25:25:72.24:1060,72,0	0/0:25,0:25:75.25:0,75,1350	0/0:43,0:43:99:0,123,2222	0/0:23,0:23:66.23:0,66,1219	0/0:25,0:25:72.25:0,72,1348	0/0:30,0:30:84.29:0,84,1545	0/0:23,0:22:66.23:0,66,1226	0/0:22,0:22:66.23:0,66,1236	0/0:36,0:36:99:0,108,2004	1/1:1,22:23:60.20:884,60,0	1/1:1,13:14:39.13:574,39,0	1/1:1,33:34:84.09:1237,84,0	0/0:18,0:18:54.19:0,54,1012	0/0:34,0:34:93.32:0,93,1732	0/0:15,0:15:45.15:0,45,842	0/0:7,0:7:21.07:0,21,393
chr10	60214378	.	CT	C	5373.99	PASS	AB=0.630;AC=36;AF=0.643;AN=56;BaseQRankSum=-12.181;DP=475;FS=2.109;HRun=12;HaplotypeScore=87.5732;InbreedingCoeff=0.8056;MQ=78.41;MQ0=0;MQRankSum=6.459;QD=16.59;ReadPosRankSum=6.362;VQSLOD=5.4003;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,14:17:8.44:248,8,0	1/1:0,5:5:11.95:93,12,0	0/0:11,1:12:1.13:0,1,54	0/1:8,0:14:29.43:29,0,47	1/1:5,19:24:26.35:387,26,0	0/0:1,0:15:19.24:0,19,88	0/0:1,0:11:16.24:0,16,75	0/0:8,0:34:48.04:0,48,229	1/1:2,23:25:35.31:457,35,0	1/1:4,18:23:52.79:400,53,0	1/1:3,17:22:49.82:377,50,0	0/0:4,0:22:30.07:0,30,158	0/0:5,0:14:26.20:0,26,125	1/1:1,11:13:34.91:261,35,0	0/1:3,10:14:1.40:163,0,1	1/1:2,13:15:38.83:302,39,0	1/1:6,12:18:32.84:255,33,0	1/1:3,10:13:23.89:186,24,0	1/1:4,9:15:27.93:197,28,0	1/1:5,29:34:80.63:627,81,0	1/1:1,5:6:8.92:69,9,0	0/0:3,0:12:23.40:0,23,117	0/0:5,0:23:30.84:0,31,137	0/0:1,0:7:10.58:0,11,50	1/1:0,14:14:41.84:325,42,0	1/1:4,19:23:53.74:415,54,0	1/1:2,21:23:56.78:441,57,0	1/1:0,6:6:17.93:139,18,0
chr10	60217903	.	A	AT	5356.94	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-11.638;DP=635;FS=21.670;HRun=6;HaplotypeScore=60.9894;InbreedingCoeff=0.9986;MQ=60.28;MQ0=0;MQRankSum=-2.579;QD=31.15;ReadPosRankSum=-1.721;VQSLOD=2.6975;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:72.16:0,72,734	0/0:8,0:8:24.05:0,24,245	0/0:23,0:18:37.50:0,37,399	0/0:14,0:9:27.06:0,27,272	0/0:30,0:30:84.19:0,84,857	1/1:4,25:29:69.22:868,69,0	1/1:3,14:16:39.12:491,39,0	1/1:6,21:26:63.19:778,63,0	0/0:18,0:18:48.11:0,48,490	0/0:39,0:39:99:0,114,1163	0/0:25,0:25:72.16:0,72,735	1/1:2,20:22:56.97:717,57,0	1/1:2,19:22:57.18:710,57,0	0/0:16,0:16:48.09:0,48,482	0/0:24,0:24:69.14:0,69,697	0/0:30,0:30:81.14:0,81,806	0/0:32,0:32:87.20:0,87,887	0/0:16,0:16:30.01:0,30,404	0/0:19,0:18:51.11:0,51,520	0/0:32,0:32:87.19:0,87,887	0/0:12,0:12:33.08:0,33,337	1/1:0,14:14:42.13:528,42,0	1/1:4,22:25:60.15:737,60,0	1/1:1,14:15:42.13:528,42,0	0/0:24,0:24:57.12:0,57,581	0/0:25,0:25:72.15:0,72,730	0/0:39,0:39:99:0,108,1102	0/0:9,0:9:21.04:0,21,214
chr10	60218767	.	CCTCA	C	4984.67	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=12.995;DP=486;FS=0.430;HRun=0;HaplotypeScore=80.9943;InbreedingCoeff=0.9939;MQ=81.91;MQ0=0;MQRankSum=-3.462;QD=41.89;ReadPosRankSum=0.298;VQSLOD=4.9474;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:72.23:0,72,1787	0/0:9,0:9:27.09:0,27,707	0/0:15,0:15:36.75:0,37,996	0/0:13,0:13:24.08:0,24,606	0/0:23,0:23:66.23:0,66,1728	1/1:3,21:24:51.17:927,51,0	1/1:1,6:7:18.06:327,18,0	1/1:1,23:24:69.22:1210,69,0	0/0:14,0:14:42.14:0,42,1094	0/0:20,0:19:57.20:0,57,1474	0/0:25,0:25:75.24:0,75,1798	1/1:0,9:9:24.08:437,24,0	1/1:1,12:13:33.11:599,33,0	0/0:10,0:10:30.10:0,30,780	0/0:15,0:15:39.13:0,39,1003	0/0:26,0:26:78.27:0,78,2033	0/0:18,0:18:54.17:0,54,1360	0/0:13,0:13:27.09:0,27,707	0/0:11,0:11:33.09:0,33,731	0/0:26,0:26:72.25:0,72,1839	0/0:13,0:13:39.12:0,39,967	1/1:0,13:13:27.09:491,27,0	1/1:0,18:18:36.06:618,36,0	1/1:1,10:11:21.06:375,21,0	0/0:19,0:19:54.17:0,54,1361	0/0:27,0:27:75.26:0,75,1950	0/0:37,0:37:99:0,108,2811	0/0:7,0:7:15.05:0,15,393
chr10	60219814	.	CTTT	C	5096.57	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=10.800;DP=517;FS=5.164;HRun=12;HaplotypeScore=86.4042;InbreedingCoeff=0.9781;MQ=73.18;MQ0=0;MQRankSum=-3.209;QD=29.46;ReadPosRankSum=2.246;VQSLOD=4.4146;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:11:33.07:0,33,595	0/0:6,0:7:21.07:0,21,368	0/0:18,0:18:17.94:0,18,339	0/0:5,0:5:14.74:0,15,140	0/0:43,0:44:99:0,117,2124	1/1:4,25:30:69.11:852,69,0	1/1:1,9:10:21.07:265,21,0	1/1:7,26:34:81.10:998,81,0	0/0:18,0:19:51.15:0,51,963	0/0:25,0:28:72.20:0,72,1320	0/0:25,0:29:78.22:0,78,1339	1/1:2,15:17:36.25:556,36,0	1/1:3,17:20:45.13:569,45,0	0/0:15,0:16:36.10:0,36,660	0/0:20,0:21:57.15:0,57,993	0/0:11,0:11:27.07:0,27,460	0/0:7,0:8:21.05:0,21,372	0/0:8,0:8:24.08:0,24,451	0/0:12,0:13:33.09:0,33,609	0/0:20,0:24:63.17:0,63,1107	0/0:4,0:5:12.02:0,12,200	1/1:2,32:34:84.21:1061,84,0	1/1:2,23:25:53.81:682,54,0	1/1:0,3:3:9.03:114,9,0	0/0:16,0:18:54.10:0,54,920	0/0:20,0:23:57.14:0,57,966	0/0:22,0:22:72.18:0,72,1268	0/0:10,0:10:30.09:0,30,553
chr10	60222051	.	AT	A	9651.53	PASS	AB=1.000;AC=53;AF=0.946;AN=56;BaseQRankSum=-3.300;DP=411;FS=19.257;HRun=8;HaplotypeScore=43.3088;InbreedingCoeff=0.5825;MQ=71.47;MQ0=0;MQRankSum=-2.441;QD=23.66;ReadPosRankSum=3.031;VQSLOD=3.3248;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,11:11:30.05:290,30,0	1/1:0,4:4:12.02:116,12,0	0/0:3,0:3:6.01:0,6,59	0/1:9,0:9:3.34:3,0,143	1/1:1,24:25:69.10:663,69,0	1/1:1,10:11:30.05:290,30,0	1/1:3,9:12:24.04:232,24,0	1/1:5,25:30:75.10:718,75,0	1/1:1,11:12:27.04:261,27,0	1/1:2,24:26:72.10:690,72,0	1/1:2,19:21:51.08:493,51,0	1/1:1,10:11:30.05:290,30,0	1/1:2,14:16:36.06:348,36,0	1/1:1,12:13:24.04:232,24,0	1/1:0,14:14:36.06:348,36,0	1/1:2,11:13:30.05:290,30,0	1/1:0,8:8:24.04:232,24,0	1/1:0,4:4:9.01:87,9,0	1/1:5,17:22:51.07:490,51,0	1/1:1,18:19:54.09:522,54,0	1/1:2,9:11:21.03:203,21,0	1/1:1,9:10:27.04:261,27,0	1/1:2,16:18:42.06:406,42,0	1/1:0,8:8:24.04:232,24,0	1/1:1,16:17:48.08:464,48,0	1/1:0,18:18:54.08:517,54,0	1/1:3,25:28:69.11:666,69,0	1/1:3,14:17:2.85:311,3,0
chr10	60222298	.	TGATG	T	6092.71	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=12.388;DP=508;FS=5.661;HRun=0;HaplotypeScore=85.3738;InbreedingCoeff=0.9917;MQ=85.04;MQ0=1;MQRankSum=-4.739;QD=46.51;ReadPosRankSum=1.457;VQSLOD=5.3479;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:72.25:0,72,1972	0/0:5,0:5:15.05:0,15,411	0/0:15,0:15:42.13:0,42,1005	0/0:24,0:24:69.19:0,69,1792	0/0:21,0:21:60.21:0,60,1644	1/1:0,24:23:60.21:1132,60,0	1/1:1,7:8:18.06:328,18,0	1/1:4,20:24:60.19:1111,60,0	0/0:20,0:20:60.21:0,60,1603	0/0:27,0:27:81.28:0,81,2202	0/0:15,0:15:45.15:0,45,1200	1/1:1,15:15:33.11:640,33,0	1/1:0,17:17:51.17:988,51,0	0/0:24,0:24:72.25:0,72,1890	0/0:19,0:19:57.20:0,57,1473	0/0:17,0:17:48.15:0,48,1251	0/0:13,0:13:39.09:0,39,1006	0/0:6,0:6:15.02:0,15,349	0/0:25,0:25:72.25:0,72,1809	0/0:17,0:17:51.18:0,51,1388	0/0:31,0:31:93.30:0,93,2349	1/1:1,14:16:45.15:850,45,0	1/1:1,15:16:36.12:696,36,0	1/1:0,10:10:18.06:349,18,0	0/0:20,0:20:57.20:0,57,1502	0/0:12,0:12:27.09:0,27,738	0/0:31,0:31:93.30:0,93,2476	0/0:11,0:11:33.11:0,33,902
chr10	60225606	.	C	CT	5734.96	PASS	AB=0.609;AC=33;AF=0.589;AN=56;BaseQRankSum=-13.246;DP=487;FS=4.819;HRun=10;HaplotypeScore=62.4135;InbreedingCoeff=0.7566;MQ=65.42;MQ0=4;MQRankSum=1.048;QD=18.68;ReadPosRankSum=0.988;VQSLOD=5.7130;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,12:12:24.05:248,24,0	1/1:2,2:4:3.01:32,3,0	0/0:34,0:19:10.14:0,10,110	0/0:19,0:8:14.63:0,15,104	1/1:5,27:32:69.07:710,69,0	0/0:1,0:20:34.62:0,35,100	0/0:0,0:9:18.11:0,18,53	0/0:5,0:23:36.38:0,36,106	1/1:4,15:19:12.09:337,12,0	1/1:5,13:17:14.92:360,15,0	1/1:5,12:17:8.40:283,8,0	0/0:2,0:11:18.32:0,18,53	0/0:1,0:14:24.44:0,24,71	0/1:10,8:18:49.81:136,0,50	1/1:2,12:14:14.87:160,15,0	1/1:1,10:11:24.06:256,24,0	1/1:2,15:17:39.10:416,39,0	1/1:12,12:25:30.79:304,31,0	1/1:3,14:16:17.46:391,17,0	1/1:6,17:23:44.99:442,45,0	1/1:0,5:5:15.04:160,15,0	0/0:1,0:17:26.25:0,26,75	0/0:3,0:16:20.28:0,20,59	0/0:1,0:14:22.41:0,22,65	0/1:2,11:13:0.57:200,0,1	0/1:5,11:16:13.11:275,0,13	1/1:1,26:27:57.12:608,57,0	1/1:4,13:17:39.10:416,39,0
chr10	60226286	.	GCAAAAATT	G	1184.18	PASS	AB=1.000;AC=13;AF=0.241;AN=54;BaseQRankSum=13.698;DP=461;FS=2.246;HRun=0;HaplotypeScore=144.9685;InbreedingCoeff=0.8303;MQ=56.71;MQ0=1;MQRankSum=-13.385;QD=13.61;ReadPosRankSum=3.045;VQSLOD=2.5402;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:54.19:0,54,2422	0/0:10,0:10:30.10:0,30,1360	0/0:7,0:6:8.29:0,8,487	0/0:7,0:6:15.05:0,15,344	0/0:34,0:34:99:0,99,4382	1/1:15,0:15:44.51:315,45,0	0/1:7,0:6:9.11:65,0,9	./.	0/0:25,0:25:75.24:0,75,3292	0/0:24,0:24:72.25:0,72,3218	0/0:23,0:23:63.22:0,63,2793	1/1:10,0:10:27.40:172,27,0	1/1:20,0:20:52.83:328,53,0	0/0:12,0:12:33.10:0,33,1385	0/0:19,0:19:51.17:0,51,2281	0/0:24,0:24:72.25:0,72,3070	0/0:16,0:16:48.16:0,48,2064	0/0:4,0:3:6.02:0,6,272	0/0:21,0:21:60.21:0,60,2658	0/0:29,0:29:87.28:0,87,3809	0/0:25,0:25:72.25:0,72,3149	1/1:10,0:10:29.07:173,29,0	1/1:17,4:21:46.63:277,47,0	1/1:4,0:4:1.56:34,2,0	0/0:19,0:19:54.19:0,54,2388	0/0:27,0:27:81.28:0,81,3531	0/0:20,0:20:57.20:0,57,2334	0/0:6,0:6:18.06:0,18,808
chr10	60226289	.	AAAAT	A	2261.78	PASS	AB=1.000;AC=15;AF=0.278;AN=54;BaseQRankSum=13.878;DP=469;FS=5.204;HRun=0;HaplotypeScore=104.9965;InbreedingCoeff=0.9135;MQ=56.87;MQ0=0;MQRankSum=-13.406;QD=24.32;ReadPosRankSum=3.327;VQSLOD=3.3773;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:54.19:0,54,1564	0/0:10,0:10:30.10:0,30,870	0/1:7,0:7:1.37:1,0,296	0/0:10,0:8:19.87:0,20,233	0/0:36,0:36:99:0,105,2955	1/1:0,15:15:45.12:505,45,0	1/1:0,6:5:12.03:133,12,0	./.	0/0:24,0:24:72.25:0,72,2087	0/0:26,0:26:78.27:0,78,2215	0/0:23,0:23:63.20:0,63,1764	1/1:1,9:10:29.94:308,30,0	1/1:0,19:20:57.09:599,57,0	0/0:12,0:12:33.11:0,33,930	0/0:19,0:19:57.20:0,57,1621	0/0:24,0:24:72.25:0,72,1994	0/0:17,0:17:51.16:0,51,1367	0/0:4,0:3:6.02:0,6,174	0/0:25,0:25:75.26:0,75,2112	0/0:28,0:28:84.29:0,84,2433	0/0:25,0:25:75.24:0,75,2078	1/1:0,10:10:30.07:313,30,0	1/1:4,17:21:48.06:494,48,0	1/1:0,4:4:11.51:99,12,0	0/0:19,0:19:57.20:0,57,1621	0/0:29,0:29:87.29:0,87,2402	0/0:17,0:17:51.18:0,51,1438	0/0:7,0:7:21.07:0,21,574
chr10	60226294	.	T	TGGG	4608.71	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=14.217;DP=513;FS=7.823;HRun=0;HaplotypeScore=104.3530;InbreedingCoeff=0.9771;MQ=55.90;MQ0=1;MQRankSum=-13.569;QD=38.41;ReadPosRankSum=0.250;VQSLOD=5.4148;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:54.19:0,54,1007	0/0:11,0:11:30.10:0,30,559	0/0:10,0:9:27.07:0,27,424	0/0:12,0:10:23.95:0,24,290	0/0:37,0:37:99:0,108,1915	1/1:2,15:17:51.17:784,51,0	1/1:2,6:7:18.05:254,18,0	1/1:17,2:18:45.14:770,45,0	0/0:26,0:26:75.24:0,75,1367	0/0:27,0:27:78.27:0,78,1455	0/0:23,0:23:63.22:0,63,1174	1/1:1,9:10:30.07:422,30,0	1/1:5,19:24:66.21:1017,66,0	0/0:13,0:13:36.12:0,36,671	0/0:21,0:21:60.21:0,60,1119	0/0:21,0:21:63.22:0,63,1175	0/0:19,0:19:54.15:0,54,961	0/0:4,0:3:6.02:0,6,112	0/0:26,0:25:72.25:0,72,1338	0/0:30,0:30:90.31:0,90,1673	0/0:24,0:24:69.22:0,69,1256	1/1:3,10:13:30.10:433,30,0	1/1:7,17:24:50.99:741,51,0	1/1:1,4:5:15:187,15,0	0/0:20,0:20:57.20:0,57,1063	0/0:27,0:27:78.27:0,78,1455	0/0:16,0:16:48.12:0,48,830	0/0:7,0:7:21.07:0,21,391
chr10	60228276	.	AT	A	5325.49	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=12.077;DP=680;FS=11.405;HRun=7;HaplotypeScore=72.8551;InbreedingCoeff=0.9935;MQ=64.88;MQ0=0;MQRankSum=1.436;QD=26.11;ReadPosRankSum=3.219;VQSLOD=4.9802;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:84.26:0,84,1042	0/0:6,0:6:18.06:0,18,227	0/0:13,0:13:33.10:0,33,412	0/0:23,0:22:53.74:0,54,603	0/0:37,0:37:99:0,108,1347	1/1:4,29:33:81.18:826,81,0	1/1:2,21:23:60.14:612,60,0	1/1:5,27:32:78.17:796,78,0	0/0:17,0:17:45.13:0,45,555	0/0:36,0:36:99:0,102,1282	0/0:21,0:21:57.16:0,57,702	1/1:1,16:17:42.10:428,42,0	1/1:1,35:36:93.10:949,93,0	0/0:24,0:24:69.19:0,69,847	0/0:32,0:32:93.30:0,93,1167	0/0:22,0:22:63.20:0,63,792	0/0:21,0:21:60:0,60,699	0/0:25,0:25:69.22:0,69,864	0/0:16,0:16:45.13:0,45,553	0/0:44,0:44:99:0,120,1487	0/0:18,0:18:54.17:0,54,678	1/1:1,21:22:60.14:612,60,0	1/1:2,21:23:63.14:643,63,0	1/1:1,17:18:45.10:459,45,0	0/0:23,0:23:60.19:0,60,754	0/0:27,0:27:69.22:0,69,867	0/0:32,0:32:87.27:0,87,1080	0/0:4,0:4:12.04:0,12,151
chr10	60228461	.	GTA	G	6136.89	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=1.947;DP=705;FS=1.509;HRun=0;HaplotypeScore=104.0582;InbreedingCoeff=0.9992;MQ=59.27;MQ0=3;MQRankSum=0.934;QD=31.63;ReadPosRankSum=1.729;VQSLOD=6.8867;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:39:99:0,99,1754	0/0:8,0:8:24.08:0,24,426	0/0:26,0:22:51.17:0,51,906	0/0:25,0:25:54.18:0,54,920	0/0:38,0:38:99:0,114,1932	1/1:5,37:41:93.31:1278,93,0	1/1:2,9:11:27.09:371,27,0	1/1:4,25:26:63.17:826,63,0	0/0:23,0:23:66.23:0,66,1158	0/0:36,0:36:99:0,102,1808	0/0:26,0:26:78.27:0,78,1384	1/1:2,19:21:54.17:741,54,0	1/1:2,25:26:69.23:948,69,0	0/0:29,0:29:81.28:0,81,1428	0/0:28,0:28:78.27:0,78,1384	0/0:26,0:26:78.25:0,78,1356	0/0:29,0:29:78.23:0,78,1351	0/0:19,0:19:50.18:0,50,903	0/0:19,0:19:48.16:0,48,820	0/0:28,0:28:84.29:0,84,1490	0/0:29,0:29:81.28:0,81,1424	1/1:1,21:21:57.19:778,57,0	1/1:3,13:16:36.12:494,36,0	1/1:2,24:25:51.17:701,51,0	0/0:13,0:13:33.08:0,33,586	0/0:28,0:28:78.27:0,78,1379	0/0:32,0:32:90.31:0,90,1592	0/0:9,0:9:27.09:0,27,479
chr10	60229800	.	T	TGTCTGTCTGA	11398.45	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-1.020;DP=686;FS=17.633;HRun=0;HaplotypeScore=210.2218;InbreedingCoeff=0.9930;MQ=68.69;MQ0=6;MQRankSum=-9.139;QD=74.02;ReadPosRankSum=-2.761;VQSLOD=2.9189;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:87.30:0,87,2608	0/0:12,0:12:36.12:0,36,1117	0/0:50,0:28:59.48:0,59,1130	0/0:65,0:40:66.18:0,66,1205	0/0:20,0:20:54.17:0,54,1637	1/1:3,4:10:17.96:677,18,0	1/1:3,7:22:18.06:957,18,0	1/1:3,11:28:69.22:2238,69,0	0/0:16,0:16:42.14:0,42,1288	0/0:29,0:29:81.26:0,81,2086	0/0:10,0:10:15.05:0,15,500	1/1:1,9:15:27.09:1433,27,0	1/1:7,10:21:48.10:2037,48,0	0/0:29,0:29:84.27:0,84,2625	0/0:23,0:22:60.21:0,60,1939	0/0:30,0:30:75.24:0,75,2171	0/0:20,0:20:57.20:0,57,1734	0/0:16,0:16:48.14:0,48,1494	0/0:24,0:23:66.21:0,66,1633	0/0:25,0:25:63.22:0,63,1876	0/0:45,0:45:99:0,120,3580	1/1:9,11:24:32.64:1753,33,0	1/1:5,13:19:33.10:1617,33,0	1/1:3,3:10:18.03:687,18,0	0/0:21,0:21:57.17:0,57,1499	0/0:21,0:20:57.19:0,57,1727	0/0:28,0:28:75.24:0,75,2425	0/0:15,0:15:45.15:0,45,1447
chr10	60229815	.	T	TTC	3580.28	PASS	AB=0.977;AC=15;AF=0.268;AN=56;BaseQRankSum=13.317;DP=736;FS=3.462;HRun=0;HaplotypeScore=167.5567;InbreedingCoeff=0.9046;MQ=69.29;MQ0=12;MQRankSum=-9.897;QD=17.64;ReadPosRankSum=-3.389;VQSLOD=3.2434;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:31:78.24:0,78,959	0/0:18,0:18:39.12:0,39,479	0/0:74,0:28:38.26:0,38,389	0/1:82,0:46:14.68:15,0,344	0/0:20,0:20:36.11:0,36,443	1/1:0,10:10:27.09:440,27,0	1/1:7,7:14:20.62:329,21,0	0/0:23,0:23:57.12:0,57,664	0/0:17,0:17:42.09:0,42,476	0/0:30,0:30:75.21:0,75,900	0/0:15,0:15:26.77:0,27,314	1/1:4,10:14:30.10:476,30,0	1/1:5,14:19:51.17:800,51,0	0/0:32,0:32:84.24:0,84,1009	0/0:29,0:28:54.17:0,54,664	0/0:23,0:23:54.17:0,54,665	0/0:21,0:21:30.09:0,30,369	0/0:22,0:20:31.75:0,32,570	0/0:25,0:24:44.98:0,45,550	0/0:24,0:24:63.05:0,63,710	0/0:41,0:43:92.95:0,93,1099	1/1:10,17:25:50.94:767,51,0	1/1:8,17:21:36.12:559,36,0	1/1:3,7:10:12.04:195,12,0	0/0:18,0:18:30.09:0,30,368	0/0:21,0:20:51.13:0,51,612	0/0:29,0:29:78.23:0,78,946	0/0:17,0:17:45.13:0,45,542
chr10	60229856	.	TCTTCCTTCCTTC	T	6506.67	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=7.276;DP=635;FS=0.911;HRun=0;HaplotypeScore=236.3373;InbreedingCoeff=0.9532;MQ=54.65;MQ0=32;MQRankSum=-9.682;QD=50.05;ReadPosRankSum=-1.417;VQSLOD=3.8448;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:68.76:0,69,1749	0/0:16,0:16:28.13:0,28,538	0/0:64,0:14:31.65:0,32,613	0/0:65,0:17:28.74:0,29,580	0/0:19,0:18:45.15:0,45,1110	1/1:7,3:10:30.10:754,30,0	1/1:14,0:11:24.55:486,25,0	1/1:1,17:18:48.14:958,48,0	0/0:17,0:15:39.12:0,39,833	0/0:28,0:28:59.03:0,59,1193	0/0:18,0:17:32.10:0,32,538	1/1:8,4:12:30.10:765,30,0	1/1:11,4:15:42.14:982,42,0	0/0:29,0:28:61.29:0,61,1368	0/0:22,0:22:45.33:0,45,942	0/0:23,0:22:35.19:0,35,740	0/0:15,0:14:9.06:0,9,375	0/0:15,0:13:3.40:0,3,770	0/0:26,0:25:64.56:0,65,1208	0/0:18,0:17:33.02:0,33,638	0/0:26,0:25:72.16:0,72,1484	1/1:16,3:18:51.17:1102,51,0	1/1:18,8:23:42.11:1078,42,0	1/1:8,8:15:9.50:380,10,0	0/0:15,0:15:23.83:0,24,472	0/0:20,0:19:38.78:0,39,904	0/0:28,0:28:46.44:0,46,1233	0/0:13,0:12:29.58:0,30,651
chr10	60229936	.	CCTTCCTTCCTTCCTTCCTTCCTTCCTTTCTTTCTTTCTTTCTTTCTTTCTTT	C	8458.13	PASS	AB=0.952;AC=34;AF=0.654;AN=52;BaseQRankSum=2.640;DP=469;FS=15.606;HRun=0;HaplotypeScore=270.7031;InbreedingCoeff=0.4934;MQ=28.76;MQ0=165;MQRankSum=1.407;QD=25.95;ReadPosRankSum=-1.067;VQSLOD=1.4656;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:9:19.18:117,0,19	1/1:4,0:4:6.02:195,6,0	./.	./.	1/1:7,22:21:14.98:255,15,0	0/0:21,0:15:31.92:0,32,1518	0/0:14,0:4:8.94:0,9,190	1/1:7,0:4:9.03:161,9,0	1/1:10,0:4:10.59:453,11,0	1/1:2,17:19:41.28:1234,41,0	1/1:4,24:24:11.28:79,11,0	0/0:21,0:5:9.12:0,9,271	0/0:19,0:5:4.57:0,5,223	1/1:11,0:7:14.53:385,15,0	1/1:9,0:7:18.53:871,19,0	1/1:16,0:7:15.05:800,15,0	1/1:19,0:6:9:441,9,0	0/1:18,0:5:75.09:188,0,75	1/1:7,0:1:3:25,3,0	1/1:7,26:26:22.31:309,22,0	0/1:13,0:7:17.71:108,0,18	0/0:16,0:6:6.03:0,6,235	0/0:31,0:17:15.93:0,16,703	0/0:21,0:12:9.03:0,9,505	0/1:15,0:7:7.22:448,0,7	1/1:34,0:25:63.91:1907,64,0	1/1:9,0:8:13.98:429,14,0	1/1:16,0:3:3.01:54,3,0
chr10	60229940	.	CCTTCCTTCCTTCCTTCCTTCCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTT	C	8738.68	PASS	AB=1.000;AC=34;AF=0.654;AN=52;BaseQRankSum=2.436;DP=462;FS=9.256;HRun=0;HaplotypeScore=265.3226;InbreedingCoeff=0.4828;MQ=29.05;MQ0=162;MQRankSum=-0.412;QD=27.31;ReadPosRankSum=-0.181;VQSLOD=1.7490;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:20,0:7:8.28:52,0,8	1/1:5,0:5:11.78:521,12,0	./.	./.	1/1:28,0:21:11.85:160,12,0	0/0:21,0:15:30.10:0,30,1602	0/0:12,0:3:5.93:0,6,164	1/1:8,0:5:7.96:101,8,0	1/1:9,0:3:9.03:384,9,0	1/1:19,0:18:35.01:946,35,0	1/1:27,0:23:5.35:21,5,0	0/0:21,0:5:8.18:0,8,279	0/0:21,0:7:10.59:0,11,701	1/1:11,0:7:14.37:469,14,0	1/1:9,0:7:21.07:1110,21,0	1/1:16,0:7:15.05:705,15,0	1/1:19,0:5:9.03:388,9,0	0/1:18,0:5:54.55:149,0,55	1/1:6,0:1:1.25:3,1,0	0/1:32,0:25:4.64:176,0,5	0/1:18,0:8:14.69:204,0,15	0/0:16,0:6:3.01:0,3,252	0/0:30,0:16:14.88:0,15,700	0/0:21,0:12:12.04:0,12,778	1/1:16,0:8:3.92:512,4,0	1/1:9,24:24:63.90:2277,64,0	1/1:10,0:8:10.59:506,11,0	1/1:16,0:3:3.01:54,3,0
chr10	60231945	.	AT	A	1902.48	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=2.856;DP=498;FS=9.160;HRun=10;HaplotypeScore=71.5004;InbreedingCoeff=0.9399;MQ=64.40;MQ0=3;MQRankSum=-0.014;QD=18.47;ReadPosRankSum=1.353;VQSLOD=4.2919;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:96.21:0,96,1047	0/0:6,0:6:15.04:0,15,166	0/0:12,0:9:20.91:0,21,188	0/0:8,0:7:12.02:0,12,119	0/0:19,1:19:25.04:0,25,491	1/1:3,15:18:44.99:390,45,0	1/1:0,14:14:35.99:313,36,0	0/0:30,0:30:78.15:0,78,833	0/0:22,0:22:63.16:0,63,690	0/0:36,0:37:99:0,102,1085	0/0:26,1:27:52.12:0,52,777	1/1:0,11:11:24:208,24,0	1/1:2,16:18:44.99:390,45,0	0/0:10,0:10:30.08:0,30,330	0/0:11,1:12:4.02:0,4,265	0/0:25,2:27:8.05:0,8,545	0/0:22,0:22:32.37:0,32,527	0/0:11,0:11:32.12:0,32,338	0/0:12,0:12:33.07:0,33,355	0/0:25,0:25:65.91:0,66,701	0/0:19,1:20:28.10:0,28,529	1/1:1,10:11:29.95:253,30,0	1/1:5,10:15:23.97:206,24,0	1/1:2,14:16:38.73:338,39,0	0/0:10,0:11:23.90:0,24,247	0/0:20,0:19:45.17:0,45,517	0/0:21,1:23:39.94:0,40,635	0/0:3,0:3:9.02:0,9,100
chr10	60231996	.	G	GC	1032.70	PASS	AC=2;AF=0.038;AN=52;BaseQRankSum=-7.907;DP=562;FS=1.611;HRun=1;HaplotypeScore=96.3277;InbreedingCoeff=0.9652;MQ=56.11;MQ0=15;MQRankSum=-4.294;QD=35.61;ReadPosRankSum=-5.162;VQSLOD=1.9498;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,102,1323	0/0:7,0:7:21.07:0,21,273	./.	./.	0/0:25,0:24:72.23:0,72,935	0/0:20,0:20:54.16:0,54,687	0/0:28,0:24:66.21:0,66,855	1/1:3,26:27:78.24:1127,78,0	0/0:16,0:16:48.14:0,48,609	0/0:37,0:37:99:0,105,1341	0/0:22,0:22:63.20:0,63,816	0/0:12,0:11:27.09:0,27,350	0/0:15,0:15:45.13:0,45,567	0/0:13,0:13:36.12:0,36,467	0/0:14,0:14:39.13:0,39,506	0/0:26,0:26:75.24:0,75,974	0/0:20,0:20:60.19:0,60,777	0/0:14,0:14:42.14:0,42,545	0/0:23,0:23:66.21:0,66,853	0/0:34,0:34:99:0,102,1286	0/0:23,0:22:66.21:0,66,857	0/0:23,0:22:66.14:0,66,820	0/0:24,0:23:60.19:0,60,778	0/0:17,0:17:45.10:0,45,565	0/0:21,0:21:63.18:0,63,791	0/0:24,0:22:66.21:0,66,857	0/0:28,0:28:81.26:0,81,1051	0/0:4,0:4:12.04:0,12,156
chr10	60232890	.	T	TGG	1316.25	PASS	AB=0.837;AC=9;AF=0.161;AN=56;BaseQRankSum=9.867;DP=626;FS=1.208;HRun=1;HaplotypeScore=109.3709;InbreedingCoeff=0.3358;MQ=58.64;MQ0=5;MQRankSum=-8.038;QD=13.16;ReadPosRankSum=0.012;VQSLOD=0.3928;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,132,1942	0/0:10,0:10:29.99:0,30,326	0/0:29,0:20:47.50:0,47,630	0/0:28,0:21:47.64:0,48,734	0/0:25,0:25:75.17:0,75,1033	0/1:9,5:13:18.68:224,0,19	0/1:9,4:10:49.86:97,0,50	0/0:11,0:7:17.56:0,18,108	0/0:35,0:35:90.26:0,90,1305	0/0:27,0:27:81.26:0,81,1200	0/0:14,0:14:42.14:0,42,642	1/1:11,10:21:6.24:464,6,0	1/1:7,9:16:33.11:464,33,0	0/0:18,0:18:48.09:0,48,640	0/0:24,0:24:69.21:0,69,1013	0/0:23,0:23:66.18:0,66,945	0/0:38,0:37:99:0,108,1542	0/0:10,0:10:30.05:0,30,410	0/0:29,0:29:62.74:0,63,1115	0/0:24,0:24:69.21:0,69,1013	0/0:55,0:54:99:0,153,2177	0/1:3,0:3:7.75:12,0,8	0/1:7,3:10:16.93:71,0,17	0/1:19,2:21:58.80:131,0,59	0/0:14,0:14:39.12:0,39,575	0/0:32,0:32:87.27:0,87,1286	0/0:22,0:21:66.13:0,66,928	0/0:12,0:12:28.46:0,28,475
chr10	60232895	.	GT	G	671.66	PASS	AB=0.923;AC=17;AF=0.304;AN=56;BaseQRankSum=12.272;DP=598;FS=1.073;HRun=2;HaplotypeScore=92.3979;InbreedingCoeff=0.8775;MQ=58.24;MQ0=4;MQRankSum=-11.235;QD=6.28;ReadPosRankSum=1.898;VQSLOD=0.8766;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,125,1823	0/0:7,0:7:15.05:0,15,216	0/0:28,0:21:51.11:0,51,671	0/0:26,0:20:28.76:0,29,546	0/0:22,0:22:63.17:0,63,882	1/1:11,1:11:19.66:98,20,0	1/1:10,1:8:14.61:104,15,0	1/1:6,2:5:7.57:74,8,0	0/0:35,0:35:92.81:0,93,1230	0/0:30,0:30:88.96:0,89,1089	0/0:16,0:15:45.12:0,45,617	1/1:21,0:19:37.11:196,37,0	1/1:15,0:15:31.92:178,32,0	0/0:18,0:18:48.14:0,48,662	0/0:25,0:25:68.46:0,68,914	0/0:20,0:20:59.55:0,60,833	0/0:36,1:36:66.91:0,67,1459	0/0:10,0:10:29.69:0,30,407	0/0:26,0:26:74.94:0,75,923	0/0:24,0:24:69.18:0,69,952	0/0:56,0:54:99:0,153,2143	1/1:3,0:3:2.90:16,3,0	1/1:9,0:9:11.67:68,12,0	1/1:14,2:16:23.18:129,23,0	0/0:13,0:13:39.07:0,39,501	0/0:32,0:32:90.23:0,90,1191	0/0:20,0:19:51.10:0,51,753	0/1:11,1:12:5.53:6,0,395
chr10	60232896	.	T	TGTG	2089.95	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=11.957;DP=575;FS=1.745;HRun=0;HaplotypeScore=105.2272;InbreedingCoeff=0.9277;MQ=58.15;MQ0=4;MQRankSum=-11.163;QD=26.79;ReadPosRankSum=1.992;VQSLOD=4.0320;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,132,2380	0/0:6,0:6:15.05:0,15,260	0/0:27,0:20:51.05:0,51,854	0/0:24,0:20:35.92:0,36,728	0/0:21,0:21:63.22:0,63,1155	1/1:1,5:8:19.20:332,19,0	1/1:2,4:6:13.54:182,14,0	1/1:3,0:2:6.01:58,6,0	0/0:35,0:35:93.30:0,93,1624	0/0:30,0:30:90.30:0,90,1544	0/0:16,0:15:45.14:0,45,807	1/1:0,9:15:38.75:672,39,0	1/1:0,9:13:33.11:655,33,0	0/0:19,0:19:48.15:0,48,799	0/0:25,0:25:69.22:0,69,1220	0/0:20,0:20:60.21:0,60,1089	0/0:37,0:36:86.62:0,87,1828	0/0:10,0:10:30.10:0,30,519	0/0:25,0:25:75.25:0,75,1290	0/0:25,0:25:69.22:0,69,1223	0/0:55,0:53:99:0,154,2723	1/1:1,0:3:2.88:15,3,0	1/1:0,3:9:11.83:152,12,0	1/1:3,2:14:23.45:219,23,0	0/0:13,0:13:39.13:0,39,709	0/0:31,0:31:90.30:0,90,1606	0/0:20,0:19:60.18:0,60,1038	0/0:12,0:12:8.56:0,9,534
chr10	60233077	.	T	TGTG	1475.15	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=9.554;DP=629;FS=1.988;HRun=0;HaplotypeScore=126.0539;InbreedingCoeff=0.9329;MQ=56.34;MQ0=17;MQRankSum=-5.331;QD=13.92;ReadPosRankSum=-3.856;VQSLOD=2.6457;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:91.21:0,91,1481	0/0:7,0:7:14.37:0,14,183	0/0:45,0:26:54.13:0,54,788	0/0:23,0:6:15.04:0,15,205	0/0:22,0:22:32.28:0,32,592	1/1:4,8:10:11.93:194,12,0	1/1:7,1:8:8.39:82,8,0	1/1:10,0:9:18.48:189,18,0	0/0:22,0:21:42.42:0,42,764	0/0:33,0:33:84.87:0,85,1389	0/0:22,0:22:55.10:0,55,868	1/1:7,4:11:18.06:363,18,0	1/1:9,3:12:26.36:347,26,0	0/0:21,0:21:48.11:0,48,780	0/0:15,0:15:30.09:0,30,482	0/0:25,0:24:54.15:0,54,825	0/0:30,0:29:66.12:0,66,1006	0/0:23,0:23:50.97:0,51,843	0/0:19,0:20:25.51:0,26,719	0/0:22,0:20:60.20:0,60,992	0/0:65,0:59:99:0,115,2105	1/1:4,8:12:11.99:215,12,0	1/1:5,0:5:2.85:43,3,0	1/1:6,17:24:12.04:236,12,0	0/0:19,0:19:39.11:0,39,608	0/0:28,0:29:62.73:0,63,1031	0/0:14,0:14:42.13:0,42,708	0/0:24,0:24:36.46:0,36,856
chr10	60233122	.	TGC	T	1682.25	PASS	AB=0.988;AC=32;AF=0.571;AN=56;BaseQRankSum=6.278;DP=573;FS=1.403;HRun=0;HaplotypeScore=124.5254;InbreedingCoeff=-0.2367;MQ=62.61;MQ0=17;MQRankSum=-1.423;QD=3.50;ReadPosRankSum=5.624;VQSLOD=2.4300;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:38,0:36:87.19:97,0,87	0/1:12,0:12:35.70:36,0,48	0/0:35,0:23:41.35:0,41,378	0/0:25,0:12:12.68:0,13,240	0/1:23,0:23:35.70:36,0,50	1/1:7,3:9:15:135,15,0	1/1:12,2:13:11.92:90,12,0	1/1:15,0:14:7.38:187,7,0	0/1:18,1:19:10.28:10,0,97	0/1:23,0:22:93.29:93,0,163	0/1:24,0:22:40.10:40,0,111	1/1:9,3:11:14.91:122,15,0	1/1:12,1:12:11.68:68,12,0	0/1:26,0:25:55.68:56,0,213	0/1:21,0:20:58.58:59,0,71	0/1:20,1:20:62.60:83,0,63	0/1:34,0:33:44.04:44,0,174	0/1:19,1:20:28.25:86,0,28	0/0:16,0:15:0.09:0,0,160	0/1:21,0:21:49.40:49,0,134	0/1:48,0:45:0.82:1,0,383	1/1:7,1:8:3:29,3,0	1/1:3,2:5:9:81,9,0	1/1:19,1:19:2.94:18,3,0	0/0:16,0:16:20.68:0,21,166	0/1:22,1:22:31.17:289,0,31	0/1:14,0:14:83.99:112,0,84	0/1:17,0:17:30.34:30,0,69
chr10	60233124	.	CGT	C	2994.85	PASS	AB=0.654;AC=38;AF=0.731;AN=52;BaseQRankSum=0.126;DP=562;FS=9.866;HRun=0;HaplotypeScore=118.5625;InbreedingCoeff=0.3325;MQ=62.78;MQ0=18;MQRankSum=0.344;QD=7.00;ReadPosRankSum=2.080;VQSLOD=2.4948;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,29:36:27.08:312,27,0	1/1:10,2:13:20.49:177,20,0	0/0:34,0:23:3.01:0,3,30	0/0:24,0:11:6.02:0,6,74	1/1:4,21:25:12.03:134,12,0	1/1:10,0:9:8.45:41,8,0	0/0:13,0:12:3.85:0,4,11	0/0:13,0:12:2.98:0,3,21	1/1:7,12:19:11.89:120,12,0	1/1:17,3:21:27.04:250,27,0	1/1:5,16:20:11.20:117,11,0	1/1:10,0:9:8.52:41,9,0	./.	0/1:13,11:24:24.68:165,0,25	1/1:4,16:21:17.61:163,18,0	1/1:4,16:19:14.50:150,15,0	1/1:16,17:34:7.03:172,7,0	1/1:4,14:19:17.56:205,18,0	1/1:14,1:14:1.45:64,1,0	0/1:9,12:21:26.79:132,0,27	0/1:26,20:44:64.51:132,0,65	1/1:6,0:6:2.84:14,3,0	1/1:5,0:5:5.68:27,6,0	./.	0/0:8,8:16:2.60:0,3,10	1/1:7,16:22:36.47:339,36,0	1/1:3,7:11:20.89:220,21,0	0/1:7,11:19:1.07:166,0,1
chr10	60233135	.	GTGTGTGTGTGTGTGTGTA	G	1132.40	PASS	AB=1.000;AC=10;AF=0.179;AN=56;BaseQRankSum=4.187;DP=601;FS=11.184;HRun=0;HaplotypeScore=232.6125;InbreedingCoeff=0.4880;MQ=51.96;MQ0=31;MQRankSum=-3.344;QD=13.02;ReadPosRankSum=-0.964;VQSLOD=1.2779;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:40:37.84:0,38,1971	0/0:12,0:12:21.07:0,21,1062	0/0:30,0:11:6.49:0,6,124	0/0:32,0:5:6.02:0,6,137	0/0:25,0:25:14.97:0,15,782	1/1:13,3:15:7.96:393,8,0	0/1:19,0:17:54.77:57,0,55	0/0:10,0:7:9.91:0,10,131	0/0:21,0:21:15.42:0,15,618	0/0:24,0:23:39.90:0,40,1971	0/0:21,0:19:16.74:0,17,984	1/1:12,2:13:8.43:395,8,0	0/0:18,0:17:4.26:0,4,72	0/0:24,0:23:26.92:0,27,1432	0/0:23,0:22:24.08:0,24,1205	0/0:22,0:21:18.09:0,18,1028	0/0:36,0:35:38.76:0,39,1631	0/0:20,0:21:10.65:0,11,1370	0/1:19,0:15:33.96:34,0,737	0/0:20,0:20:27.09:0,27,1233	0/0:46,0:42:36.55:0,37,1577	1/1:14,0:14:1.95:133,2,0	1/1:4,1:5:6.02:263,6,0	0/0:25,0:24:0.98:0,1,47	0/0:14,0:14:6.02:0,6,260	0/0:19,0:18:35.15:0,35,2208	0/0:14,0:13:33.09:0,33,1629	0/0:15,0:15:21.07:0,21,1291
chr10	60233775	.	CCAGT	C	8748.75	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=14.284;DP=589;FS=0.000;HRun=0;HaplotypeScore=99.5840;InbreedingCoeff=0.9996;MQ=75.23;MQ0=0;MQRankSum=-5.329;QD=53.35;ReadPosRankSum=-0.802;VQSLOD=5.5971;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:96.33:0,96,2744	0/0:9,0:9:27.09:0,27,765	0/0:14,0:14:42.14:0,42,1104	0/0:11,0:11:33.07:0,33,803	0/0:27,0:27:81.28:0,81,2345	1/1:0,31:31:77.88:1635,78,0	1/1:0,16:16:33.11:691,33,0	1/1:1,25:26:78.24:1456,78,0	0/0:20,0:20:60.20:0,60,1677	0/0:30,0:30:90.31:0,90,2568	0/0:15,0:15:45.15:0,45,1304	1/1:0,19:19:51.18:1069,51,0	1/1:0,19:19:51.18:1069,51,0	0/0:28,0:28:84.29:0,84,2431	0/0:21,0:21:63.22:0,63,1810	0/0:27,0:27:81.28:0,81,2242	0/0:19,0:19:57.20:0,57,1607	0/0:12,0:12:33.11:0,33,937	0/0:24,0:24:72.25:0,72,2056	0/0:21,0:21:63.22:0,63,1777	0/0:21,0:21:63.22:0,63,1796	1/1:2,21:23:63.22:1320,63,0	1/1:0,13:13:36.12:755,36,0	1/1:0,17:17:36.12:754,36,0	0/0:20,0:20:60.21:0,60,1679	0/0:30,0:30:90.30:0,90,2490	0/0:26,0:26:78.27:0,78,2161	0/0:18,0:17:54.19:0,54,1564
chr10	60236193	.	T	TG	3648.89	PASS	AB=0.677;AC=24;AF=0.444;AN=54;BaseQRankSum=-4.513;DP=535;FS=1.378;HRun=9;HaplotypeScore=65.7627;InbreedingCoeff=0.4005;MQ=55.55;MQ0=22;MQRankSum=1.192;QD=12.00;ReadPosRankSum=-0.144;VQSLOD=3.0473;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:30:68.95:0,69,593	0/1:4,6:9:5:176,0,5	./.	0/1:18,1:4:17.21:25,0,17	0/0:23,0:23:56.97:0,57,492	0/0:20,0:20:41.94:0,42,357	0/0:18,0:17:38.95:0,39,334	0/0:4,0:17:28.51:0,29,84	0/1:12,3:19:1.44:122,0,1	1/1:6,9:15:18.02:189,18,0	1/1:11,10:20:1.02:239,1,0	0/0:15,0:15:34.80:0,35,292	0/0:16,0:16:26.98:0,27,234	0/1:4,11:15:1.99:208,0,2	0/1:11,8:18:31.05:145,0,31	0/0:12,0:12:32.99:0,33,286	1/1:6,11:17:24.06:265,24,0	0/1:14,19:33:66.88:466,0,67	0/1:8,8:16:42.17:243,0,42	1/1:3,7:10:11.72:132,12,0	1/1:16,15:30:9.93:314,10,0	0/0:18,0:18:50.97:0,51,438	0/0:19,0:19:50.97:0,51,439	0/0:25,0:25:56.95:0,57,490	1/1:6,13:19:13.05:372,13,0	1/1:11,11:22:4.02:272,4,0	0/1:6,18:24:42:380,0,42	1/1:3,5:8:9.02:99,9,0
chr10	60236780	.	G	GGT	1502.37	PASS	AB=0.786;AC=13;AF=0.232;AN=56;BaseQRankSum=5.873;DP=713;FS=1.926;HRun=0;HaplotypeScore=113.3099;InbreedingCoeff=0.6415;MQ=69.43;MQ0=12;MQRankSum=-0.745;QD=9.22;ReadPosRankSum=-0.623;VQSLOD=3.5187;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:36:60.17:0,60,701	0/0:8,0:8:21.06:0,21,252	0/0:41,0:16:17.93:0,18,181	0/0:45,0:30:40.30:0,40,427	0/0:33,0:34:65.71:0,66,741	1/1:10,7:19:2.12:206,2,0	1/1:16,2:18:5.97:88,6,0	0/0:21,0:20:3.30:0,3,38	0/0:18,0:18:35.78:0,36,400	0/0:27,0:27:51.15:0,51,606	0/0:25,0:25:54.14:0,54,633	0/1:19,6:26:3.75:306,0,4	1/1:13,1:15:0.56:116,1,0	0/0:22,0:22:51.15:0,51,609	0/0:22,0:22:51.14:0,51,602	0/1:5,15:20:23.68:310,0,24	0/0:31,0:31:72.17:0,72,846	0/0:26,0:26:48.14:0,48,569	0/0:22,0:20:33.03:0,33,378	0/0:22,0:22:41.88:0,42,459	0/0:46,0:46:99:0,111,1293	0/1:13,0:13:0:0,0,0	1/1:25,4:28:16.58:299,17,0	1/1:18,5:23:13.83:332,14,0	0/0:32,0:32:61.06:0,61,714	0/0:23,0:23:57.17:0,57,683	0/0:28,0:28:66.11:0,66,744	0/0:19,0:20:50.98:0,51,581
chr10	60236797	.	GTA	G	1651.05	PASS	AB=0.942;AC=16;AF=0.286;AN=56;BaseQRankSum=6.540;DP=724;FS=7.727;HRun=0;HaplotypeScore=113.8624;InbreedingCoeff=0.2373;MQ=58.19;MQ0=12;MQRankSum=3.712;QD=5.75;ReadPosRankSum=-1.798;VQSLOD=2.3849;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:39,0:37:95.33:95,0,103	0/1:8,0:8:2.29:2,0,233	0/0:35,0:8:18.25:0,18,132	0/0:34,0:16:8.95:0,9,301	0/1:33,0:33:99:128,0,168	0/1:23,0:23:1.23:163,0,1	1/1:20,0:20:28.90:344,29,0	1/1:13,0:12:25.60:176,26,0	0/1:17,0:17:30.89:69,0,31	0/0:26,0:26:31.66:0,32,860	0/0:25,0:25:58.32:0,58,852	1/1:27,1:28:37.32:342,37,0	0/1:13,1:14:17.21:127,0,17	0/0:25,0:25:39.83:0,40,909	0/0:24,0:24:43.16:0,43,839	0/0:22,0:22:10.07:0,10,350	0/0:34,0:34:34.22:0,34,1128	0/1:25,0:25:56.81:57,0,123	0/0:22,0:20:9.29:0,9,549	0/0:19,0:19:28.12:0,28,652	0/0:68,0:66:65.09:0,65,1851	0/1:1,13:14:0.01:0,0,0	0/1:27,1:27:19.40:163,0,19	0/1:25,0:25:35.42:154,0,35	0/0:32,0:32:44.14:0,44,1081	0/0:25,0:25:63.08:0,63,845	0/0:28,0:28:67.85:0,68,989	0/0:18,0:18:15.94:0,16,534
chr10	60236799	.	ATG	A	1381.46	PASS	AB=0.898;AC=14;AF=0.250;AN=56;BaseQRankSum=4.030;DP=727;FS=8.192;HRun=0;HaplotypeScore=116.3213;InbreedingCoeff=0.4369;MQ=58.06;MQ0=13;MQRankSum=-0.040;QD=5.98;ReadPosRankSum=2.285;VQSLOD=2.5901;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,31:37:39.11:459,39,0	0/1:5,3:8:52.57:53,0,165	1/1:36,0:8:0.47:1,0,0	0/0:32,0:15:3.01:0,3,45	1/1:16,16:33:35.13:362,35,0	0/0:22,0:22:20.97:0,21,200	0/0:20,0:20:12.47:0,12,117	0/0:13,0:12:11.12:0,11,59	1/1:4,13:17:24.07:283,24,0	0/1:22,4:26:53.42:53,0,650	0/0:22,3:25:44.87:0,45,647	0/0:27,0:27:10.62:0,11,182	0/0:13,0:13:2.16:0,2,169	0/0:25,0:25:3.51:0,4,782	0/1:25,0:25:13.12:13,0,632	0/1:22,0:22:5.76:6,0,512	0/0:35,0:35:35.42:0,35,946	1/1:8,16:25:29.89:317,30,0	0/0:22,0:20:16.46:0,16,479	0/0:18,0:18:34.01:0,34,544	0/0:72,0:70:46.50:0,46,1700	0/0:14,0:14:2.99:0,3,24	0/0:28,0:27:15.85:0,16,271	0/0:25,0:25:41.50:0,42,410	0/0:29,5:34:30.83:0,31,877	0/0:24,1:25:12.80:0,13,589	0/0:27,0:28:7.50:0,7,687	0/0:18,0:18:4.57:0,5,313
chr10	60239158	.	G	GC	1982.63	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=5.444;DP=493;FS=16.356;HRun=2;HaplotypeScore=96.2680;InbreedingCoeff=0.9526;MQ=79.11;MQ0=3;MQRankSum=-3.494;QD=13.86;ReadPosRankSum=-1.052;VQSLOD=1.6153;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:35.91:0,36,409	0/0:6,0:6:18.01:0,18,164	0/0:29,0:22:22.12:0,22,316	0/1:11,0:9:2.16:4,0,2	0/0:24,0:24:66.03:0,66,598	1/1:15,0:15:40.49:253,40,0	1/1:14,0:14:35.34:191,35,0	1/1:7,17:25:55.99:573,56,0	0/0:10,0:11:24.03:0,24,224	0/0:20,0:20:50.74:0,51,465	0/0:21,0:21:59.47:0,59,512	1/1:9,0:9:21.72:118,22,0	1/1:18,0:19:43.48:235,43,0	0/0:11,0:11:27.02:0,27,244	0/0:28,0:28:68.98:0,69,614	0/0:16,0:16:41.07:0,41,365	0/0:28,0:28:69.02:0,69,617	0/0:9,0:9:23.95:0,24,202	0/0:16,0:17:50.42:0,50,456	0/0:27,0:26:71.20:0,71,626	0/0:13,0:13:33.03:0,33,304	1/1:18,0:18:46.36:293,46,0	1/1:15,0:15:35.09:227,35,0	1/1:17,0:17:49.26:294,49,0	0/0:9,0:9:18.02:0,18,169	0/0:17,0:17:48.04:0,48,445	0/0:29,0:29:71.58:0,72,637	0/0:13,0:13:39:0,39,344
chr10	60239159	.	CAA	C	4429.66	PASS	AB=0.695;AC=43;AF=0.768;AN=56;BaseQRankSum=-0.994;DP=486;FS=2.134;HRun=16;HaplotypeScore=94.8900;InbreedingCoeff=0.5595;MQ=77.84;MQ0=3;MQRankSum=-0.542;QD=11.05;ReadPosRankSum=5.722;VQSLOD=4.0016;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:13,1:23:3.94:4,0,192	1/1:3,3:6:8.95:75,9,0	0/0:30,0:23:5.19:0,5,144	0/1:11,0:8:5.24:5,0,89	0/0:6,0:22:32.49:0,32,156	1/1:4,4:15:27.24:156,27,0	1/1:1,0:13:32.90:141,33,0	0/0:21,0:23:44.04:0,44,453	0/1:1,1:11:5.45:5,0,39	1/1:2,14:19:25.76:314,26,0	0/1:5,16:21:32.75:256,0,33	1/1:2,0:8:16.42:70,16,0	1/1:6,0:19:32.92:142,33,0	1/1:4,7:11:14.93:125,15,0	1/1:9,18:28:38.78:326,39,0	1/1:3,12:16:32.61:261,33,0	1/1:5,21:28:15.63:361,16,0	0/0:5,0:9:9.49:0,9,34	1/1:5,12:18:13.25:300,13,0	1/1:6,21:26:50.23:412,50,0	1/1:2,6:12:11.39:157,11,0	1/1:3,0:18:35.56:152,36,0	1/1:3,0:14:21.77:92,22,0	1/1:1,2:17:44.40:214,44,0	1/1:1,7:8:14.97:125,15,0	1/1:5,10:17:23.60:229,24,0	1/1:4,21:28:41.49:421,41,0	0/1:7,4:13:0.22:84,0,0
chr10	60239268	.	GA	G	3869.80	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=16.192;DP=576;FS=2.148;HRun=7;HaplotypeScore=82.4797;InbreedingCoeff=0.9984;MQ=83.70;MQ0=0;MQRankSum=-3.220;QD=24.81;ReadPosRankSum=-0.228;VQSLOD=3.8529;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:54.13:0,54,661	0/0:8,0:8:21.07:0,21,264	0/0:21,0:21:45.01:0,45,506	0/0:18,0:18:26.82:0,27,302	0/0:37,0:37:90.29:0,90,1131	1/1:3,23:26:66.11:660,66,0	1/1:3,13:16:36.08:367,36,0	1/1:2,25:27:75.12:748,75,0	0/0:16,0:16:42.12:0,42,517	0/0:23,0:23:51.15:0,51,629	0/0:29,0:29:81.24:0,81,994	1/1:1,11:12:27.02:264,27,0	1/1:1,14:15:36.04:356,36,0	0/0:18,0:18:48.14:0,48,588	0/0:13,0:13:36.12:0,36,453	0/0:16,0:16:45.14:0,45,566	0/0:34,0:34:99:0,102,1249	0/0:17,0:17:42.13:0,42,526	0/0:10,0:10:30.08:0,30,364	0/0:38,0:38:99:0,102,1273	0/0:18,0:18:51.14:0,51,616	1/1:1,24:25:57.12:580,57,0	1/1:1,21:22:60.06:589,60,0	1/1:1,12:13:30.06:306,30,0	0/0:22,0:22:60.18:0,60,743	0/0:30,0:30:78.20:0,78,953	0/0:21,0:21:63.19:0,63,777	0/0:10,0:10:24.08:0,24,302
chr10	60240157	.	C	CA	6108.54	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-1.366;DP=669;FS=0.329;HRun=6;HaplotypeScore=68.0646;InbreedingCoeff=0.9994;MQ=73.59;MQ0=0;MQRankSum=-0.757;QD=31.82;ReadPosRankSum=1.671;VQSLOD=5.1979;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:93.19:0,93,949	0/0:9,0:9:24.05:0,24,244	0/0:20,0:20:32.27:0,32,492	0/0:17,0:16:31.76:0,32,365	0/0:33,0:33:84.14:0,84,836	1/1:1,34:35:93.30:1170,93,0	1/1:1,13:14:36.12:453,36,0	1/1:5,17:22:51.16:641,51,0	0/0:28,0:28:81.18:0,81,826	0/0:34,0:34:99:0,102,1037	0/0:25,0:25:69.15:0,69,704	1/1:1,18:19:48.15:604,48,0	1/1:3,20:23:57.18:712,57,0	0/0:17,0:17:51.10:0,51,513	0/0:21,0:21:60.14:0,60,611	0/0:19,0:19:51.11:0,51,520	0/0:20,0:20:51.11:0,51,520	0/0:11,0:11:30.07:0,30,306	0/0:24,0:24:51.08:0,51,513	0/0:38,0:38:99:0,108,1102	0/0:15,0:15:45.10:0,45,458	1/1:0,20:20:54.17:679,54,0	1/1:0,29:29:72.23:905,72,0	1/1:1,29:30:75.24:943,75,0	0/0:26,0:26:72.14:0,72,726	0/0:34,0:34:99:0,99,1004	0/0:39,0:39:99:0,108,1086	0/0:13,0:13:36.08:0,36,367
chr10	60241562	.	T	TC	7651.86	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=17.759;DP=712;FS=22.020;HRun=2;HaplotypeScore=140.4062;InbreedingCoeff=0.9992;MQ=80.96;MQ0=0;MQRankSum=-3.786;QD=36.61;ReadPosRankSum=-0.375;VQSLOD=2.4520;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,132,1607	0/0:18,0:18:54.17:0,54,669	0/0:23,0:23:65.54:0,66,758	0/0:17,0:17:44.80:0,45,515	0/0:29,0:29:84.25:0,84,1027	1/1:1,19:20:54.18:769,54,0	1/1:0,30:30:87.29:1252,87,0	1/1:5,27:32:81.27:1159,81,0	0/0:31,0:31:81.23:0,81,978	0/0:22,0:22:63.20:0,63,781	0/0:23,0:23:57.17:0,57,694	1/1:1,21:22:54.18:764,54,0	1/1:2,21:23:59.94:861,60,0	0/0:25,1:26:29.01:0,29,812	0/0:22,0:21:66.19:0,66,802	0/0:30,0:30:87.26:0,87,1067	0/0:27,0:27:75.24:0,75,928	0/0:23,0:23:64.71:0,65,768	0/0:28,0:28:78.24:0,78,965	0/0:15,0:15:45.12:0,45,533	0/0:40,0:40:99:0,114,1398	1/1:1,19:20:48.16:689,48,0	1/1:0,30:30:75.25:1079,75,0	1/1:2,30:32:75.19:1079,75,0	0/0:24,0:24:69.22:0,69,855	0/0:36,0:36:99:0,99,1225	0/0:16,0:16:45.14:0,45,558	0/0:7,0:7:21.04:0,21,245
chr10	60242336	.	TG	T	17733.24	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=17.222;DP=716;FS=5.132;HRun=1;HaplotypeScore=121.3061;InbreedingCoeff=0.9975;MQ=91.19;MQ0=0;MQRankSum=-3.981;QD=39.23;ReadPosRankSum=4.359;VQSLOD=4.3723;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,53:53:99:1929,138,0	1/1:0,13:13:33.11:461,33,0	0/0:20,0:20:60.20:0,60,958	0/0:36,0:36:99:0,105,1602	1/1:0,27:27:78.23:1069,78,0	0/0:26,0:26:78.27:0,78,1245	0/0:21,0:21:60.20:0,60,959	0/0:27,0:27:81.27:0,81,1273	1/1:0,29:29:84.28:1175,84,0	1/1:0,29:29:84.28:1171,84,0	1/1:0,21:21:54.09:711,54,0	0/0:28,0:28:84.27:0,84,1318	0/0:24,0:24:72.25:0,72,1150	1/1:0,24:24:72.24:1006,72,0	1/1:0,29:29:84.28:1174,84,0	1/1:0,24:24:69.15:965,69,0	1/1:0,27:27:81.27:1132,81,0	1/1:0,11:11:30.10:419,30,0	1/1:0,25:25:75.25:1048,75,0	1/1:0,20:20:57.12:773,57,0	1/1:0,37:37:99:1510,108,0	0/0:24,0:24:72.25:0,72,1151	0/0:26,0:26:78.25:0,78,1220	0/0:32,0:32:96.33:0,96,1534	1/1:0,22:22:66.22:923,66,0	1/1:0,24:24:72.24:1007,72,0	1/1:0,32:32:75.25:1049,75,0	1/1:0,5:5:15.05:210,15,0
chr10	60244281	.	T	TTATATATA	4302.31	PASS	AB=0.910;AC=35;AF=0.673;AN=52;BaseQRankSum=5.492;DP=236;FS=4.249;HRun=0;HaplotypeScore=84.7902;InbreedingCoeff=0.5997;MQ=79.48;MQ0=0;MQRankSum=-6.281;QD=29.47;ReadPosRankSum=-0.121;VQSLOD=4.3214;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:5:3:25,3,0	1/1:3,4:7:18.06:591,18,0	0/1:14,0:11:16.38:16,0,74	0/1:12,0:8:0:0,0,0	1/1:5,0:9:12.02:137,12,0	0/0:21,0:21:57.17:0,57,1261	0/0:5,0:5:15.01:0,15,242	0/0:27,0:27:57.20:0,57,1336	1/1:3,0:8:15:136,15,0	1/1:4,2:7:18.06:557,18,0	1/1:6,2:8:9.03:323,9,0	0/0:6,0:6:12.04:0,12,200	0/0:6,0:6:9.01:0,9,153	1/1:3,1:4:3.01:35,3,0	1/1:2,0:2:3.01:35,3,0	1/1:3,2:5:9.03:361,9,0	1/1:11,2:13:15.05:567,15,0	1/1:6,0:7:3:25,3,0	1/1:4,0:5:6.02:174,6,0	1/1:4,0:4:6.01:61,6,0	./.	./.	0/0:10,0:10:21.07:0,21,526	0/0:9,0:9:24.07:0,24,495	1/1:2,1:3:6.02:141,6,0	1/1:7,0:10:15.01:156,15,0	1/1:9,5:14:30.09:897,30,0	0/1:6,0:8:16.08:66,0,16
chr10	60244307	.	G	GTA	4255.57	PASS	AB=0.647;AC=33;AF=0.635;AN=52;BaseQRankSum=-3.171;DP=229;FS=6.382;HRun=0;HaplotypeScore=58.6675;InbreedingCoeff=0.7045;MQ=68.32;MQ0=0;MQRankSum=-3.203;QD=32.24;ReadPosRankSum=2.104;VQSLOD=6.5423;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,9:9:24.08:401,24,0	1/1:2,6:8:15.05:251,15,0	0/0:7,0:4:0.30:0,0,1	0/0:12,0:7:5.67:0,6,34	0/1:5,5:11:23.13:186,0,23	0/0:19,0:19:51.15:0,51,635	0/0:1,0:1:3.01:0,3,38	0/0:4,0:32:48.73:0,49,271	1/1:3,2:5:9.03:150,9,0	1/1:4,3:7:11.63:160,12,0	1/1:1,5:6:15.05:250,15,0	0/0:4,0:4:12.04:0,12,153	0/0:4,0:4:12.03:0,12,139	1/1:1,2:3:6.02:100,6,0	1/1:1,7:8:18.06:301,18,0	1/1:1,5:6:15.05:251,15,0	1/1:3,14:17:25.90:406,26,0	1/1:1,9:10:24.08:401,24,0	1/1:2,1:3:3.01:50,3,0	1/1:2,2:4:3:25,3,0	./.	./.	0/0:11,0:11:24.08:0,24,305	0/0:7,0:7:15.05:0,15,191	1/1:1,2:3:3.01:50,3,0	1/1:1,6:7:18.06:297,18,0	1/1:5,13:17:42.13:675,42,0	1/1:1,6:7:18.06:301,18,0
chr10	60244782	.	A	ACT	7849.60	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-15.889;DP=574;FS=0.369;HRun=0;HaplotypeScore=85.9152;InbreedingCoeff=0.9980;MQ=94.72;MQ0=0;MQRankSum=-3.213;QD=56.47;ReadPosRankSum=2.932;VQSLOD=5.1021;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:81.24:0,81,1267	0/0:8,0:8:24.08:0,24,391	0/0:28,0:28:81.25:0,81,1276	0/0:24,0:24:63.21:0,63,985	0/0:19,0:19:57.19:0,57,924	1/1:0,32:34:93.32:1885,93,0	1/1:0,20:20:57.20:1157,57,0	0/0:32,0:32:90.30:0,90,1422	0/0:19,0:19:54.12:0,54,760	0/0:27,0:27:72.22:0,72,1087	0/0:28,0:28:81.26:0,81,1286	1/1:0,14:14:42.14:852,42,0	1/1:0,23:24:66.23:1338,66,0	0/0:16,0:16:48.16:0,48,782	0/0:19,0:19:54.16:0,54,854	0/0:21,0:21:63.18:0,63,952	0/0:25,0:25:75.18:0,75,1120	0/0:6,0:6:18.06:0,18,286	0/0:18,0:18:51.17:0,51,828	0/0:24,0:24:72.22:0,72,1117	0/0:18,0:18:51.16:0,51,799	1/1:0,13:13:36.12:731,36,0	1/1:0,16:16:45.15:912,45,0	1/1:1,17:18:48.16:974,48,0	0/0:17,0:17:51.16:0,51,797	0/0:25,0:25:69.22:0,69,1081	0/0:24,0:24:72.25:0,72,1173	0/0:10,0:10:30.10:0,30,488
chr10	60247631	.	C	CT	14332.52	PASS	AB=0.563;AC=49;AF=0.875;AN=56;BaseQRankSum=-9.099;DP=605;FS=0.513;HRun=8;HaplotypeScore=61.0358;InbreedingCoeff=0.8318;MQ=65.53;MQ0=1;MQRankSum=2.115;QD=26.84;ReadPosRankSum=5.844;VQSLOD=4.9052;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,28:32:72.21:831,72,0	1/1:1,9:10:24.07:277,24,0	0/0:16,0:9:23.97:0,24,209	0/0:14,0:12:31.23:0,31,244	1/1:4,26:29:66.11:732,66,0	1/1:1,24:26:65.99:727,66,0	1/1:5,14:19:14.66:423,15,0	0/0:41,0:40:99:0,99,906	1/1:3,18:21:51.15:589,51,0	1/1:3,20:23:32.71:630,33,0	1/1:4,22:25:63.06:683,63,0	1/1:0,14:14:36.11:415,36,0	1/1:3,15:18:45.13:519,45,0	1/1:2,18:20:51.15:589,51,0	1/1:1,24:25:69.21:796,69,0	1/1:2,22:24:38.73:700,39,0	1/1:7,21:27:60.18:692,60,0	1/1:3,17:20:20.71:492,21,0	1/1:4,14:15:36.09:404,36,0	1/1:3,24:27:66.20:762,66,0	1/1:2,11:12:30.09:346,30,0	1/1:1,29:30:74.67:836,75,0	0/1:4,14:18:12.76:373,0,13	1/1:4,12:16:36.11:415,36,0	1/1:1,14:15:33.10:381,33,0	1/1:3,18:21:54.08:577,54,0	1/1:2,31:34:87.06:971,87,0	1/1:0,6:6:15.04:173,15,0
chr10	60248220	.	GTT	G	8581.43	PASS	AB=0.964;AC=39;AF=0.696;AN=56;BaseQRankSum=-12.653;DP=571;FS=7.089;HRun=12;HaplotypeScore=87.4751;InbreedingCoeff=0.7487;MQ=64.71;MQ0=6;MQRankSum=-0.113;QD=19.46;ReadPosRankSum=1.477;VQSLOD=4.1128;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,19:25:35.35:400,35,0	1/1:0,6:5:12.03:122,12,0	0/1:21,0:12:8.73:9,0,111	0/1:26,0:19:4.84:5,0,198	1/1:3,23:26:60.07:610,60,0	0/0:6,1:26:19.91:0,20,136	0/0:2,0:15:35.44:0,35,139	0/1:11,1:13:9.48:9,0,195	1/1:1,23:24:66.15:671,66,0	1/1:2,23:25:66.10:660,66,0	1/1:1,20:22:50.80:500,51,0	0/0:4,0:14:19.96:0,20,70	0/0:5,0:21:37.43:0,37,132	1/1:5,11:16:33.01:336,33,0	1/1:2,23:24:60.13:610,60,0	1/1:3,22:25:54.10:549,54,0	1/1:1,18:19:48.11:488,48,0	1/1:0,11:11:24.05:244,24,0	1/1:3,21:23:57.12:578,57,0	1/1:6,23:32:35.22:522,35,0	1/1:4,14:18:30.05:305,30,0	0/0:3,0:16:35.14:0,35,134	0/0:3,0:23:48.43:0,48,220	0/0:1,1:14:2.32:0,2,74	1/1:0,16:15:42.10:427,42,0	1/1:8,20:28:66.07:662,66,0	1/1:2,23:24:57.07:570,57,0	1/1:2,10:12:30.06:305,30,0
chr10	60250201	.	T	TGG	1380.43	PASS	AB=1.000;AC=32;AF=0.571;AN=56;BaseQRankSum=0.902;DP=421;FS=3.250;HRun=3;HaplotypeScore=46.5096;InbreedingCoeff=0.4226;MQ=38.40;MQ0=75;MQRankSum=0.187;QD=5.63;ReadPosRankSum=1.755;VQSLOD=-0.2272;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:9:1.73:0,2,5	0/0:2,0:1:1.25:0,1,3	0/1:35,0:7:4.79:5,0,133	0/0:31,0:5:11.14:0,11,113	1/1:16,0:12:1.88:28,2,0	1/1:15,0:13:26.95:338,27,0	1/1:8,0:6:18.05:275,18,0	0/0:44,0:32:56.36:0,56,711	0/0:10,0:8:0.55:0,1,3	1/1:16,0:10:1.48:3,1,0	0/1:20,0:16:0.99:1,0,31	1/1:12,0:6:17.99:207,18,0	1/1:18,0:12:27.08:360,27,0	1/1:11,0:4:0.90:3,1,0	0/1:7,0:5:0.29:0,0,1	0/1:10,0:6:0.48:2,0,0	0/0:12,0:8:1.44:0,1,4	0/0:11,0:11:3.79:0,4,18	0/0:12,0:6:2.26:0,2,40	1/1:15,0:7:2.36:7,2,0	1/1:12,0:9:1.83:9,2,0	1/1:0,6:6:2.93:37,3,0	1/1:2,12:14:5.93:56,6,0	1/1:5,0:4:12.04:180,12,0	1/1:6,0:4:1.77:5,2,0	1/1:19,0:14:2.71:7,3,0	0/0:23,0:15:1.63:0,2,17	0/0:14,0:6:2.40:0,2,37
chr10	60251986	.	GGT	G	285.26	PASS	AB=0.911;AC=7;AF=0.125;AN=56;BaseQRankSum=10.801;DP=742;FS=28.019;HRun=0;HaplotypeScore=160.6176;InbreedingCoeff=-0.1373;MQ=64.52;MQ0=21;MQRankSum=-13.942;QD=1.81;ReadPosRankSum=2.668;VQSLOD=1.1641;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:50:48.56:0,49,1283	0/0:13,0:11:14.06:0,14,266	0/0:29,0:22:18.37:0,18,550	0/1:28,0:22:36.65:37,0,407	0/0:24,0:20:26.71:0,27,686	0/1:19,5:22:91.78:92,0,704	0/1:12,6:13:99:118,0,258	0/1:39,0:32:50.03:50,0,1111	0/0:36,0:31:45.83:0,46,994	0/0:28,0:26:66.24:0,66,962	0/1:17,0:14:4.36:4,0,255	0/0:41,0:36:53.42:0,53,1071	0/0:27,0:26:28.78:0,29,651	0/1:20,0:18:8.78:9,0,280	0/0:41,0:38:67.56:0,68,1371	0/0:32,0:28:38.98:0,39,746	0/0:39,0:38:75.79:0,76,1190	0/0:12,0:12:13.72:0,14,196	0/0:27,0:23:45.62:0,46,767	0/0:25,0:21:18.78:0,19,728	0/0:27,0:27:46.88:0,47,606	0/0:22,0:22:47.23:0,47,1038	0/0:15,0:14:36.11:0,36,616	0/1:9,3:12:99:100,0,314	0/0:20,0:13:18.85:0,19,378	0/0:25,0:22:44.52:0,45,747	0/0:40,0:35:65.73:0,66,1297	0/0:8,0:8:16.12:0,16,138
chr10	60252233	.	C	CT	533.23	PASS	AB=0.619;AC=3;AF=0.054;AN=56;BaseQRankSum=-6.714;DP=721;FS=12.280;HRun=7;HaplotypeScore=72.6441;InbreedingCoeff=0.5892;MQ=60.33;MQ0=31;MQRankSum=2.019;QD=15.68;ReadPosRankSum=0.322;VQSLOD=2.2570;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:47:99:0,105,1012	0/0:10,0:10:21.03:0,21,203	0/0:23,0:22:50.34:0,50,434	0/0:10,0:9:25.79:0,26,218	0/0:30,0:27:69.05:0,69,652	0/0:25,0:22:57.08:0,57,548	0/0:28,0:22:57:0,57,528	0/0:30,0:22:54.06:0,54,512	0/0:32,0:23:56.68:0,57,531	0/0:30,0:28:69.05:0,69,657	0/0:26,0:23:60.09:0,60,579	0/0:27,0:21:42.04:0,42,399	0/0:31,0:25:60.07:0,60,573	0/0:31,0:29:75.11:0,75,723	0/0:40,0:30:72.07:0,72,682	0/0:33,0:28:63.09:0,63,604	0/0:13,0:12:24.03:0,24,232	0/0:13,0:12:30.05:0,30,290	0/0:24,0:19:48.06:0,48,458	0/0:19,0:16:45.07:0,45,434	0/0:38,0:34:69.09:0,69,666	0/0:12,0:10:21.03:0,21,202	0/0:21,0:21:54.06:0,54,514	0/0:32,0:30:69.10:0,69,666	0/0:15,0:13:27.03:0,27,261	0/1:10,16:20:29.41:522,0,29	0/0:40,0:31:78.05:0,78,732	1/1:4,4:7:9.03:109,9,0
chr10	60252535	.	C	CCA	899.57	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-7.373;DP=604;FS=4.594;HRun=0;HaplotypeScore=62.7404;InbreedingCoeff=0.9705;MQ=57.86;MQ0=10;MQRankSum=-3.021;QD=39.11;ReadPosRankSum=-3.473;VQSLOD=4.5048;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:20:54.18:0,54,741	0/0:10,0:10:30.10:0,30,412	0/0:27,0:7:18.02:0,18,229	0/0:20,0:8:14.65:0,15,153	0/0:32,0:31:90.30:0,90,1234	0/0:25,0:25:72.24:0,72,985	0/0:14,0:14:42.14:0,42,577	1/1:3,20:21:57.20:994,57,0	0/0:20,0:20:48.16:0,48,655	0/0:23,0:23:63.20:0,63,851	0/0:23,0:21:57.19:0,57,778	0/0:13,0:13:39.13:0,39,533	0/0:21,0:21:51.17:0,51,701	0/0:16,0:16:45.15:0,45,618	0/0:22,0:22:60.20:0,60,823	0/0:21,0:21:63.21:0,63,865	0/0:20,0:17:45.11:0,45,596	0/0:22,0:21:57.19:0,57,778	0/0:25,0:24:60.20:0,60,824	0/0:34,0:31:69.23:0,69,933	0/0:8,0:8:21.07:0,21,289	0/0:19,0:18:54.16:0,54,711	0/0:36,0:36:90.30:0,90,1230	0/0:14,0:13:33.11:0,33,451	0/0:22,0:22:60.17:0,60,804	0/0:27,0:27:69.23:0,69,936	0/0:32,0:32:90.30:0,90,1236	0/0:13,0:13:36.12:0,36,482
chr10	60257491	.	GA	G	9146.93	PASS	AB=0.550;AC=49;AF=0.875;AN=56;BaseQRankSum=-1.193;DP=548;FS=9.322;HRun=11;HaplotypeScore=63.0971;InbreedingCoeff=0.8369;MQ=74.23;MQ0=0;MQRankSum=-1.607;QD=19.42;ReadPosRankSum=6.783;VQSLOD=4.8603;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,12:13:26.96:222,27,0	1/1:1,8:9:23.97:197,24,0	0/0:23,1:23:10.04:0,10,340	0/0:22,0:20:20.60:0,21,221	1/1:7,25:33:70.91:572,71,0	1/1:3,17:20:47.94:394,48,0	1/1:4,17:21:15.95:337,16,0	0/0:29,0:30:63.02:0,63,652	1/1:1,17:18:47.94:394,48,0	1/1:3,16:20:49.94:400,50,0	1/1:1,15:16:47.94:394,48,0	1/1:6,14:20:43.96:351,44,0	1/1:1,12:14:31.99:252,32,0	1/1:2,10:12:23.97:197,24,0	1/1:1,20:21:47.94:394,48,0	1/1:3,11:14:29.96:246,30,0	1/1:2,9:11:26.97:222,27,0	1/1:5,13:17:35.95:296,36,0	1/1:4,24:28:71.90:589,72,0	0/1:4,17:22:4.11:367,0,4	1/1:1,18:20:52.98:425,53,0	1/1:2,16:18:41.92:345,42,0	1/1:1,25:26:71.92:591,72,0	1/1:1,3:4:8.99:74,9,0	1/1:1,21:22:56.93:468,57,0	1/1:6,27:33:42.87:559,43,0	1/1:2,25:27:74.90:616,75,0	1/1:0,11:11:29.97:246,30,0
chr10	60258138	.	AG	A	15883.35	PASS	AC=50;AF=0.926;AN=54;BaseQRankSum=8.074;DP=574;FS=9.453;HRun=3;HaplotypeScore=115.6390;InbreedingCoeff=0.8974;MQ=55.73;MQ0=37;MQRankSum=6.529;QD=31.77;ReadPosRankSum=4.908;VQSLOD=3.7235;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,39:39:93.29:1153,93,0	1/1:0,14:14:39.12:483,39,0	./.	0/0:20,0:2:3.01:0,3,37	1/1:0,24:24:66.21:818,66,0	1/1:2,22:23:57.18:707,57,0	1/1:0,19:18:51.16:632,51,0	0/0:31,0:26:78.25:0,78,1106	1/1:2,22:24:60.19:744,60,0	1/1:0,17:17:51.15:620,51,0	1/1:1,23:24:60.19:744,60,0	1/1:2,15:17:39.12:481,39,0	1/1:0,19:17:42.13:521,42,0	1/1:0,15:15:45.14:558,45,0	1/1:0,18:18:54.17:669,54,0	1/1:1,12:13:36.11:446,36,0	1/1:3,19:22:48.15:595,48,0	1/1:0,7:7:18.06:223,18,0	1/1:0,14:11:30.09:372,30,0	1/1:2,21:23:60.15:727,60,0	1/1:1,24:25:66.21:818,66,0	1/1:2,23:24:66.21:818,66,0	1/1:2,26:27:60.19:744,60,0	1/1:0,11:11:30.09:372,30,0	1/1:0,18:18:54.17:669,54,0	1/1:0,20:19:57.18:706,57,0	1/1:1,27:26:72.23:892,72,0	1/1:2,10:12:30.09:372,30,0
chr10	60258635	.	CTATAAGCAT	C	25020.97	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=9.934;DP=455;FS=1.155;HRun=0;HaplotypeScore=137.3327;InbreedingCoeff=0.8948;MQ=60.40;MQ0=0;MQRankSum=-9.705;QD=65.84;ReadPosRankSum=7.397;VQSLOD=4.4490;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,12:12:18.06:555,18,0	1/1:0,4:4:12.04:372,12,0	0/0:23,0:21:51.15:0,51,1825	0/0:20,0:15:26.72:0,27,1100	1/1:3,16:19:45.07:1220,45,0	1/1:0,20:19:48.16:1482,48,0	1/1:0,11:10:21.07:607,21,0	0/0:32,0:32:93.28:0,93,4095	1/1:1,12:13:27.09:837,27,0	1/1:1,14:15:42.14:1275,42,0	1/1:2,20:22:57.03:1573,57,0	1/1:1,9:10:18.06:521,18,0	1/1:0,16:16:33.11:986,33,0	1/1:3,12:14:30.10:924,30,0	1/1:2,18:19:48.16:1448,48,0	1/1:0,15:15:42.14:1296,42,0	1/1:3,5:8:15.05:465,15,0	1/1:1,6:7:18.06:558,18,0	1/1:4,13:15:30.10:884,30,0	1/1:1,22:23:63.13:1706,63,0	1/1:3,8:9:8.99:206,9,0	1/1:0,12:12:27.09:837,27,0	1/1:0,12:12:33.11:984,33,0	1/1:4,7:10:3.01:93,3,0	1/1:0,22:22:51.18:1540,51,0	1/1:1,20:20:57.20:1676,57,0	1/1:2,31:33:78.27:2417,78,0	1/1:2,7:9:18.06:558,18,0
chr10	60258853	.	AT	A	7281.42	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=2.802;DP=467;FS=0.000;HRun=10;HaplotypeScore=44.3931;InbreedingCoeff=0.7103;MQ=60.94;MQ0=37;MQRankSum=1.067;QD=17.30;ReadPosRankSum=5.381;VQSLOD=4.7363;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,18:21:50.98:443,51,0	1/1:0,9:9:26.99:234,27,0	0/0:4,0:3:6.02:0,6,66	0/0:16,0:11:26.05:0,26,227	1/1:2,30:32:77.96:677,78,0	1/1:0,0:4:6.11:18,6,0	1/1:0,0:2:2.04:6,2,0	0/0:26,0:23:63.13:0,63,666	1/1:2,19:21:53.99:468,54,0	1/1:3,19:20:53.95:460,54,0	1/1:1,22:24:59.01:501,59,0	1/1:0,0:2:2.04:6,2,0	1/1:2,1:7:5.03:32,5,0	1/1:1,14:15:29.99:260,30,0	1/1:0,16:16:47.99:416,48,0	1/1:1,10:11:23.99:208,24,0	1/1:9,20:25:44.97:391,45,0	1/1:0,14:12:24:208,24,0	1/1:2,9:10:26.99:234,27,0	1/1:2,20:22:56.96:494,57,0	1/1:1,8:9:23.99:208,24,0	1/1:1,0:3:2.04:6,2,0	1/1:2,0:9:3.93:12,4,0	1/1:3,0:7:6.11:18,6,0	1/1:2,20:22:59.99:521,60,0	1/1:1,19:19:53.99:469,54,0	1/1:4,30:33:77.97:677,78,0	1/1:0,13:13:35.99:313,36,0
chr10	60260690	.	A	ATTGTTGTTGTTT	10136.66	PASS	AB=1.000;AC=37;AF=0.685;AN=54;BaseQRankSum=-2.862;DP=570;FS=8.671;HRun=0;HaplotypeScore=180.3310;InbreedingCoeff=0.7834;MQ=51.15;MQ0=15;MQRankSum=-7.865;QD=26.47;ReadPosRankSum=-0.994;VQSLOD=3.2339;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:26:35.94:641,36,0	1/1:6,0:5:6.02:195,6,0	./.	0/0:15,0:6:2.97:0,3,22	1/1:16,7:21:9:367,9,0	0/0:22,0:22:42.13:0,42,1276	0/1:18,0:18:19.40:19,0,594	0/0:35,0:34:2.99:0,3,24	1/1:18,6:24:36.12:1857,36,0	1/1:18,0:17:9.02:221,9,0	1/1:20,0:19:14.08:396,14,0	0/0:20,0:20:36.12:0,36,1220	0/0:21,0:21:42.14:0,42,1423	1/1:11,0:11:18.06:586,18,0	1/1:20,0:20:18.06:586,18,0	1/1:17,3:19:30.05:1319,30,0	1/1:34,0:31:18.06:570,18,0	1/1:18,0:18:26.95:549,27,0	1/1:29,0:23:24:610,24,0	1/1:12,0:12:21:528,21,0	1/1:27,0:27:18.16:509,18,0	0/0:9,0:9:15.04:0,15,432	0/0:19,0:19:39.13:0,39,1222	0/0:24,0:23:24.93:0,25,735	1/1:11,0:10:6.02:195,6,0	1/1:16,5:20:17.99:265,18,0	1/1:28,0:28:15.05:488,15,0	1/1:14,0:13:11.93:235,12,0
chr10	60260726	.	TTTG	T	872.03	PASS	AB=0.961;AC=8;AF=0.143;AN=56;BaseQRankSum=2.770;DP=547;FS=4.527;HRun=0;HaplotypeScore=94.0745;InbreedingCoeff=-0.1763;MQ=54.84;MQ0=38;MQRankSum=2.821;QD=4.93;ReadPosRankSum=-4.100;VQSLOD=0.8379;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:30:70:0,70,1176	0/0:6,0:5:6.01:0,6,62	0/0:26,0:5:12.02:0,12,185	0/1:26,0:7:7.27:7,0,88	0/0:24,0:22:30.02:0,30,534	0/0:22,0:22:57.19:0,57,1136	0/0:18,0:17:51.13:0,51,965	0/0:21,0:21:42.14:0,42,790	0/0:20,0:20:48.06:0,48,834	0/1:14,0:13:38.61:240,0,39	0/1:12,0:11:44.83:112,0,45	0/0:16,0:16:45.15:0,45,926	0/0:19,0:19:54.19:0,54,1109	0/0:15,0:15:0.54:0,1,110	0/0:14,0:14:18.04:0,18,187	0/0:20,0:19:45.15:0,45,817	0/1:29,0:28:70.59:71,0,106	0/0:17,0:17:34.90:0,35,542	0/1:26,0:17:64.53:162,0,65	0/1:23,0:22:59.13:297,0,59	0/1:11,9:20:99:109,0,164	0/0:10,0:10:27.09:0,27,527	0/0:23,0:23:15.73:0,16,1072	0/0:22,0:21:48.12:0,48,936	0/0:14,0:13:6.01:0,6,63	0/0:21,0:17:36.12:0,36,731	0/1:27,0:27:1.31:1,0,110	0/0:11,0:10:24.08:0,24,397
chr10	60260729	.	G	GTTGTTGTTT	9109.13	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=-7.583;DP=546;FS=0.425;HRun=0;HaplotypeScore=115.0033;InbreedingCoeff=0.4541;MQ=55.36;MQ0=41;MQRankSum=-4.104;QD=26.25;ReadPosRankSum=-2.143;VQSLOD=4.0183;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:31,0:30:99:245,0,903	1/1:0,6:6:5.69:284,6,0	0/0:27,0:5:12.02:0,12,185	0/0:25,0:7:14.50:0,15,151	0/1:21,0:19:81.14:81,0,459	0/0:23,0:23:61.99:0,62,1472	0/0:18,0:17:50.20:0,50,1130	0/0:18,0:18:42.14:0,42,783	0/1:20,0:20:99:284,0,656	1/1:3,11:15:30.09:593,30,0	1/1:3,9:13:23.11:691,23,0	0/0:16,0:16:45.15:0,45,1243	0/0:19,0:19:54.18:0,54,1470	1/1:0,14:15:18.06:851,18,0	1/1:3,11:15:18.06:852,18,0	0/1:18,0:17:99:471,0,562	1/1:2,24:28:18.06:829,18,0	0/1:16,0:16:99:236,0,346	1/1:11,11:19:51.94:973,52,0	1/1:1,18:20:48.05:1092,48,0	1/1:19,0:19:24.47:472,24,0	0/0:10,0:10:27.09:0,27,652	0/0:23,0:23:13.13:0,13,1347	0/0:20,0:19:33.03:0,33,1115	1/1:2,12:16:6.02:284,6,0	0/1:22,0:18:99:123,0,595	1/1:3,21:27:15.33:711,15,0	0/1:12,0:11:37.92:38,0,253
chr10	60260818	.	G	GTT	7838.82	PASS	AB=0.681;AC=48;AF=0.857;AN=56;BaseQRankSum=-3.595;DP=408;FS=6.353;HRun=9;HaplotypeScore=52.7646;InbreedingCoeff=0.6682;MQ=65.57;MQ0=15;MQRankSum=0.745;QD=22.85;ReadPosRankSum=5.699;VQSLOD=3.2819;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:9,13:21:32.93:453,33,0	0/1:4,4:8:3.21:168,0,3	0/0:13,0:8:14.68:0,15,153	0/0:25,0:18:31.84:0,32,290	1/1:1,11:11:33.07:482,33,0	1/1:3,0:21:10.73:103,11,0	1/1:2,0:15:30.42:114,30,0	0/0:25,0:24:60.11:0,60,626	1/1:3,13:19:23.57:331,24,0	1/1:4,9:13:36.11:535,36,0	1/1:5,9:14:33.10:467,33,0	1/1:0,0:6:12.48:43,12,0	1/1:1,0:10:12.35:43,12,0	1/1:1,3:4:9.03:139,9,0	1/1:3,7:11:26.56:356,27,0	1/1:1,7:9:23.57:332,24,0	1/1:7,18:23:57.16:834,57,0	1/1:3,21:26:51.16:747,51,0	0/1:11,7:14:91.61:313,0,92	1/1:3,4:7:15.05:229,15,0	1/1:4,2:7:15:185,15,0	1/1:1,0:7:12.48:43,12,0	1/1:2,0:8:9.98:34,10,0	1/1:4,1:11:18.49:115,18,0	1/1:6,9:15:11.51:344,12,0	1/1:2,14:18:47.09:598,47,0	1/1:8,12:17:27.31:601,27,0	1/1:5,6:12:15.05:231,15,0
chr10	60260820	.	T	TG	63.82	PASS	AB=0.983;AC=9;AF=0.161;AN=56;BaseQRankSum=-3.806;DP=411;FS=9.780;HRun=0;HaplotypeScore=73.6022;InbreedingCoeff=0.2894;MQ=65.27;MQ0=15;MQRankSum=2.322;QD=0.81;ReadPosRankSum=4.012;VQSLOD=0.4871;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,2:22:28.10:0,28,234	0/0:9,0:8:19.26:0,19,132	0/0:16,0:8:18.02:0,18,228	0/0:25,0:18:41.50:0,41,472	0/0:12,0:11:28.72:0,29,157	0/1:22,0:22:52.15:70,0,52	0/1:15,0:15:27.69:32,0,28	0/0:25,0:24:66.20:0,66,889	0/0:19,0:19:17.39:0,17,151	0/0:12,0:12:34.87:0,35,208	0/0:15,0:14:35.03:0,35,199	1/1:6,0:6:8.98:26,9,0	0/1:11,0:10:13.50:19,0,14	0/0:5,0:5:8.45:0,8,45	0/0:11,0:11:17.41:0,17,105	0/0:9,0:9:19.35:0,19,124	0/0:24,0:22:51.83:0,52,272	0/0:25,1:26:45:0,45,262	0/0:18,0:14:34.05:0,34,294	0/0:7,0:7:20.19:0,20,117	0/0:7,0:7:13.54:0,14,80	1/1:6,0:6:9.31:27,9,0	0/1:8,0:8:12.96:13,0,53	0/1:10,1:11:21.06:21,0,48	0/0:16,0:15:17.46:0,17,144	0/0:18,0:18:33.23:0,33,228	0/0:20,0:17:39.29:0,39,233	0/0:14,0:14:25.48:0,25,159
chr10	60261595	.	A	AG	22509.75	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=4.446;DP=596;FS=1.004;HRun=0;HaplotypeScore=98.2105;InbreedingCoeff=0.9951;MQ=76.76;MQ0=0;MQRankSum=-4.806;QD=42.88;ReadPosRankSum=6.260;VQSLOD=4.4230;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,42:43:99:1918,120,0	1/1:0,7:7:18.06:287,18,0	0/0:21,0:21:58.41:0,58,730	0/0:17,0:17:50.70:0,51,620	1/1:0,31:30:81.28:1283,81,0	1/1:0,21:20:60.20:958,60,0	1/1:1,17:18:45.15:719,45,0	0/0:33,0:33:96.31:0,96,1315	1/1:0,13:11:24.08:383,24,0	1/1:1,23:23:66.23:1055,66,0	1/1:0,13:13:36.12:563,36,0	1/1:1,18:18:45.15:718,45,0	1/1:0,15:15:39.13:620,39,0	1/1:2,17:19:48.10:736,48,0	1/1:1,16:15:33.11:527,33,0	1/1:0,11:10:27.09:431,27,0	1/1:1,39:40:99:1774,111,0	1/1:0,17:17:51.11:785,51,0	1/1:0,19:19:57.15:859,57,0	1/1:0,17:18:54.18:851,54,0	1/1:0,26:26:78.27:1246,78,0	1/1:0,17:17:48.16:766,48,0	1/1:1,14:15:42.14:668,42,0	1/1:0,37:37:99:1678,105,0	1/1:0,22:22:60.20:957,60,0	1/1:2,31:33:93.32:1485,93,0	1/1:0,20:20:54.18:859,54,0	1/1:2,8:10:24.08:383,24,0
chr10	60261703	.	C	CA	13247.09	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-0.403;DP=610;FS=9.196;HRun=4;HaplotypeScore=64.0387;InbreedingCoeff=0.9033;MQ=46.52;MQ0=72;MQRankSum=6.168;QD=25.18;ReadPosRankSum=3.646;VQSLOD=3.2778;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,36:45:65.47:900,65,0	1/1:0,8:8:15.05:205,15,0	0/0:27,0:2:3.01:0,3,34	0/0:28,0:5:11.99:0,12,115	1/1:2,23:25:51.14:677,51,0	1/1:3,13:14:27.09:369,27,0	1/1:1,24:21:39.13:533,39,0	0/0:29,0:15:36.10:0,36,408	1/1:1,17:16:36.11:492,36,0	1/1:2,26:22:57.18:763,57,0	1/1:2,15:11:15.05:205,15,0	1/1:1,19:20:39.13:533,39,0	1/1:0,11:10:24.08:328,24,0	1/1:1,12:12:21.07:287,21,0	1/1:1,18:18:36.12:492,36,0	1/1:0,15:15:27.08:369,27,0	1/1:3,42:39:99:1353,99,0	1/1:3,15:14:24.08:328,24,0	1/1:3,15:13:33.11:451,33,0	1/1:2,21:20:36.12:491,36,0	1/1:5,28:32:66.18:881,66,0	1/1:2,9:9:18.06:246,18,0	1/1:3,21:24:44.71:588,45,0	1/1:1,9:10:27.09:369,27,0	1/1:0,16:15:27.09:369,27,0	1/1:3,27:28:75.25:1026,75,0	1/1:1,19:20:47.99:624,48,0	1/1:5,12:15:27.09:369,27,0
chr10	60262799	.	G	GTGTT	14721.26	PASS	AB=0.839;AC=50;AF=0.893;AN=56;BaseQRankSum=1.922;DP=562;FS=20.275;HRun=0;HaplotypeScore=107.4485;InbreedingCoeff=0.5790;MQ=70.84;MQ0=2;MQRankSum=-5.610;QD=30.23;ReadPosRankSum=6.282;VQSLOD=3.1690;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,8:15:27.05:603,27,0	1/1:2,8:9:21.03:454,21,0	0/0:34,0:27:47.63:0,48,701	0/1:33,0:32:18.42:18,0,426	1/1:9,8:20:24.08:564,24,0	1/1:20,0:19:4.09:756,4,0	1/1:11,0:9:12:231,12,0	0/0:40,0:38:75.26:0,75,1292	1/1:7,8:15:21.07:519,21,0	1/1:11,8:17:42.14:980,42,0	1/1:11,13:19:26.96:424,27,0	1/1:10,0:10:12.04:249,12,0	1/1:12,0:10:21.07:444,21,0	1/1:7,11:20:27.09:666,27,0	1/1:12,6:20:24.08:569,24,0	1/1:10,6:16:21.03:395,21,0	1/1:6,12:18:36.12:869,36,0	0/1:11,9:20:3.13:648,0,3	1/1:8,6:9:24.08:530,24,0	1/1:11,7:17:33.10:765,33,0	1/1:11,8:19:21.07:533,21,0	1/1:20,0:21:5.15:608,5,0	1/1:9,3:14:27.09:629,27,0	1/1:11,0:10:15.05:331,15,0	1/1:5,10:16:24.08:608,24,0	1/1:12,14:25:51.17:1131,51,0	1/1:14,15:25:30.10:663,30,0	1/1:7,7:13:21.07:532,21,0
chr10	60262809	.	G	GTT	6459.40	PASS	AB=0.869;AC=34;AF=0.607;AN=56;BaseQRankSum=7.915;DP=538;FS=7.860;HRun=3;HaplotypeScore=124.8506;InbreedingCoeff=-0.1793;MQ=67.79;MQ0=3;MQRankSum=-4.888;QD=14.42;ReadPosRankSum=9.630;VQSLOD=0.7645;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:13,2:14:99:170,0,101	0/1:11,0:10:95.64:133,0,96	0/0:29,0:20:53.14:0,53,622	0/0:30,0:25:32.73:0,33,522	0/1:20,2:24:99:157,0,195	0/1:18,5:22:10.34:445,0,10	0/1:7,2:9:23.94:119,0,24	0/0:30,0:30:84.29:0,84,1279	1/1:11,2:13:27.01:283,27,0	0/1:19,3:20:99:409,0,145	0/1:21,3:15:85.46:166,0,85	1/1:3,2:6:12.04:150,12,0	1/1:8,6:9:25.12:250,25,0	1/1:13,3:16:30.45:315,30,0	0/1:16,2:18:90.29:248,0,90	0/1:16,3:19:83.17:191,0,83	0/1:19,3:22:99:311,0,107	0/1:21,2:21:54.53:281,0,55	0/1:9,3:11:19.56:292,0,20	1/1:13,4:15:29.93:355,30,0	1/1:16,2:16:29.97:283,30,0	1/1:17,9:24:16.23:400,16,0	1/1:8,6:14:9.19:288,9,0	1/1:9,2:10:12.04:162,12,0	0/1:20,3:21:91.02:171,0,91	0/1:20,5:25:99:476,0,137	0/1:20,4:21:75.31:259,0,75	0/1:9,1:8:0.14:148,0,0
chr10	60262811	.	G	GTG	3167.52	PASS	AB=0.853;AC=36;AF=0.643;AN=56;BaseQRankSum=9.179;DP=541;FS=6.327;HRun=0;HaplotypeScore=133.0794;InbreedingCoeff=-0.0917;MQ=66.48;MQ0=3;MQRankSum=-4.202;QD=7.04;ReadPosRankSum=10.559;VQSLOD=1.5063;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:13,0:14:61.20:101,0,61	0/1:11,0:10:47.33:83,0,47	0/0:28,0:18:47.54:0,48,506	0/0:31,0:25:36.92:0,37,467	0/1:26,0:27:93.24:93,0,107	1/1:15,0:22:21:250,21,0	0/1:2,3:10:5.60:73,0,6	0/0:31,0:31:84.27:0,84,1154	1/1:9,0:11:20.67:134,21,0	0/1:19,0:19:62.76:196,0,63	0/1:17,0:13:44.73:63,0,45	1/1:4,0:6:11.75:77,12,0	1/1:1,0:13:23.90:185,24,0	1/1:17,0:20:17.09:176,17,0	0/1:18,0:19:61.36:123,0,61	0/1:12,0:18:41.09:73,0,41	0/1:20,0:23:66.97:160,0,67	0/1:19,0:19:21.34:116,0,21	1/1:11,0:13:5.64:138,6,0	1/1:17,0:18:19.85:175,20,0	1/1:10,0:10:20.59:128,21,0	1/1:15,0:23:10.98:189,11,0	1/1:6,0:13:9.46:155,9,0	1/1:7,0:9:11.77:83,12,0	0/1:19,0:21:32.63:116,0,33	0/1:22,0:27:55.36:237,0,55	0/1:18,0:20:68.91:116,0,69	0/1:10,0:9:3.75:103,0,4
chr10	60262812	.	G	GTTT	3706.73	PASS	AB=0.982;AC=38;AF=0.679;AN=56;BaseQRankSum=7.307;DP=550;FS=17.681;HRun=11;HaplotypeScore=138.4743;InbreedingCoeff=-0.2040;MQ=65.04;MQ0=5;MQRankSum=-3.080;QD=7.61;ReadPosRankSum=5.601;VQSLOD=-0.4398;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:14,0:14:54.77:104,0,55	0/1:11,0:10:25.43:25,0,71	0/1:28,0:18:10.33:10,0,113	0/0:30,0:24:16.99:0,17,228	0/1:29,0:27:77.55:78,0,129	1/1:19,2:22:2.24:386,2,0	1/1:7,1:8:9.32:90,9,0	0/0:29,0:32:40.24:0,40,449	1/1:11,0:11:18.62:103,19,0	0/1:22,0:19:95.47:126,0,95	0/1:24,0:15:31.70:68,0,32	1/1:5,1:6:6.02:83,6,0	1/1:13,3:13:24.05:325,24,0	1/1:20,0:20:16.95:171,17,0	0/1:20,0:19:65.90:142,0,66	0/1:18,0:18:39.86:40,0,64	0/1:22,0:23:89.15:112,0,89	0/1:20,0:19:29.87:44,0,30	0/1:15,0:13:20.86:59,0,21	1/1:23,0:18:17.34:205,17,0	1/1:13,0:11:17.13:71,17,0	1/1:24,2:23:26.81:481,27,0	1/1:9,4:13:13.39:355,13,0	1/1:9,1:8:12.51:168,13,0	0/1:23,0:21:51:133,0,51	0/1:27,0:27:73.06:202,0,73	0/1:22,0:20:67.60:68,0,85	1/1:12,0:10:0.12:58,0,0
chr10	60263036	.	AGGAG	A	1610.44	PASS	AC=12;AF=0.250;AN=48;BaseQRankSum=-5.404;DP=446;FS=0.776;HRun=0;HaplotypeScore=45.2314;InbreedingCoeff=0.8450;MQ=29.42;MQ0=90;MQRankSum=-2.859;QD=20.13;ReadPosRankSum=0.783;VQSLOD=2.9573;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:16:14.98:0,15,366	0/0:10,0:9:21.07:0,21,608	./.	./.	0/0:15,0:9:3.01:0,3,87	1/1:3,17:12:27.09:565,27,0	./.	./.	0/0:15,0:13:9.03:0,9,260	0/0:15,0:8:24.06:0,24,630	0/0:17,0:10:15.05:0,15,432	1/1:2,8:7:5.75:125,6,0	1/1:0,16:12:17.96:334,18,0	0/0:16,0:11:24.04:0,24,626	0/0:16,0:12:12.04:0,12,346	0/0:14,0:12:15.05:0,15,433	0/0:27,0:19:27.09:0,27,781	0/0:22,0:13:24.01:0,24,625	0/0:15,0:6:18.06:0,18,499	0/0:24,0:19:33.11:0,33,951	0/0:27,0:8:9.03:0,9,260	1/1:0,8:4:9.03:188,9,0	1/1:0,9:5:12.04:251,12,0	1/1:0,16:12:15.05:314,15,0	0/0:10,0:6:12.04:0,12,333	0/0:26,0:16:48.16:0,48,1366	0/0:22,0:13:21.07:0,21,607	0/0:8,0:5:5.99:0,6,173
chr10	60263791	.	G	GC	3463.83	PASS	AB=0.891;AC=50;AF=0.893;AN=56;BaseQRankSum=0.890;DP=407;FS=17.317;HRun=4;HaplotypeScore=26.4319;InbreedingCoeff=0.3378;MQ=36.65;MQ0=97;MQRankSum=1.747;QD=9.98;ReadPosRankSum=4.162;VQSLOD=-0.2598;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,14:7:15.05:205,15,0	1/1:0,6:4:3.01:41,3,0	0/1:12,0:6:6.94:7,0,121	0/0:19,0:7:15.02:0,15,151	1/1:3,8:8:3.01:41,3,0	1/1:1,18:6:3.01:41,3,0	1/1:3,9:11:12.04:163,12,0	0/0:41,0:24:63.16:0,63,705	1/1:0,14:5:8.99:102,9,0	1/1:1,8:7:18.05:230,18,0	1/1:1,10:7:6.02:82,6,0	1/1:2,18:14:12.04:164,12,0	1/1:1,12:5:9.03:123,9,0	1/1:1,9:4:2.82:41,3,0	1/1:3,10:7:6.02:82,6,0	1/1:3,12:8:6.02:82,6,0	1/1:1,7:5:9.03:123,9,0	1/1:0,11:8:15.05:205,15,0	1/1:11,4:3:6:65,6,0	1/1:1,14:8:9.03:123,9,0	0/1:18,7:16:31.97:32,0,59	1/1:1,11:9:9.03:123,9,0	1/1:1,10:7:12.04:164,12,0	1/1:1,12:11:15.05:205,15,0	1/1:1,15:9:15.05:205,15,0	1/1:2,11:9:18.06:246,18,0	1/1:1,20:15:39.13:531,39,0	1/1:2,5:3:3.01:41,3,0
chr10	60264093	.	AGAGAATTCCT	A	20105.90	PASS	AB=0.566;AC=45;AF=0.833;AN=54;BaseQRankSum=4.219;DP=444;FS=17.908;HRun=0;HaplotypeScore=107.5887;InbreedingCoeff=0.2245;MQ=33.63;MQ0=51;MQRankSum=-1.286;QD=51.29;ReadPosRankSum=2.813;VQSLOD=3.3271;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,29:25:42.14:1300,42,0	1/1:1,7:8:15.05:509,15,0	0/0:11,0:1:3:0,3,27	./.	1/1:3,11:13:17.69:558,18,0	0/1:8,16:18:99:458,0,302	1/1:4,10:7:12.04:394,12,0	0/0:19,0:5:12.03:0,12,450	1/1:3,18:20:54.19:1826,54,0	1/1:3,9:12:30.06:934,30,0	1/1:1,12:12:27.09:847,27,0	1/1:1,8:7:15.05:509,15,0	1/1:0,14:11:33.11:1120,33,0	1/1:0,21:19:45.15:1515,45,0	0/1:1,6:7:9.94:362,0,10	1/1:4,14:8:21.07:712,21,0	0/1:2,12:14:99:790,0,131	0/1:8,17:21:99:1097,0,409	1/1:9,10:8:21.04:529,21,0	1/1:3,16:19:42.14:1360,42,0	1/1:3,16:11:9.50:292,10,0	1/1:2,6:7:6.02:204,6,0	1/1:1,5:5:15.05:440,15,0	0/1:4,16:15:99:310,0,135	1/1:2,12:14:36.12:1192,36,0	1/1:0,14:13:39.13:1324,39,0	1/1:1,17:15:33.11:1120,33,0	1/1:0,8:6:12.04:407,12,0
chr10	60264286	.	G	GCC	6181.48	PASS	AB=0.819;AC=46;AF=0.885;AN=52;BaseQRankSum=-2.898;DP=535;FS=0.000;HRun=10;HaplotypeScore=82.9693;InbreedingCoeff=0.1391;MQ=44.72;MQ0=42;MQRankSum=1.734;QD=13.01;ReadPosRankSum=2.292;VQSLOD=2.9344;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:30,1:29:29.23:295,29,0	1/1:7,0:5:6.01:65,6,0	./.	0/0:22,0:8:5.45:0,5,37	1/1:7,0:8:5.90:141,6,0	0/1:15,8:20:52.49:52,0,97	0/1:17,15:27:12.97:163,0,13	0/1:8,0:7:6.90:7,0,25	1/1:21,0:20:43.84:484,44,0	1/1:22,1:21:3.84:317,4,0	1/1:7,0:6:7.26:62,7,0	1/1:7,12:20:17.29:232,17,0	1/1:6,8:14:11.52:132,12,0	1/1:18,0:18:21.14:350,21,0	1/1:20,0:20:39.05:379,39,0	1/1:19,0:18:37.79:401,38,0	1/1:33,0:32:58.45:604,58,0	1/1:24,0:24:60.51:554,61,0	1/1:22,0:10:17.99:153,18,0	1/1:10,0:10:18.02:170,18,0	1/1:24,0:19:30.04:292,30,0	1/1:7,4:9:5.71:64,6,0	./.	1/1:4,7:11:6.02:87,6,0	1/1:16,1:16:36.06:359,36,0	1/1:17,0:16:27.01:249,27,0	1/1:26,0:20:43.68:447,44,0	0/1:16,0:15:42.12:121,0,42
chr10	60264295	.	C	CCT	10429.97	PASS	AB=0.886;AC=39;AF=0.750;AN=52;BaseQRankSum=-5.030;DP=625;FS=4.620;HRun=0;HaplotypeScore=88.7066;InbreedingCoeff=0.2207;MQ=42.32;MQ0=101;MQRankSum=3.237;QD=19.39;ReadPosRankSum=4.837;VQSLOD=4.9786;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:9,22:31:21.96:549,22,0	1/1:2,6:6:9.02:128,9,0	./.	0/0:19,0:5:5.81:0,6,45	0/1:5,13:19:2.61:238,0,3	0/0:22,0:18:5.75:0,6,203	0/1:38,0:24:63.43:63,0,65	0/0:10,0:5:8.35:0,8,69	1/1:4,20:22:51.07:838,51,0	1/1:7,22:26:15.43:732,15,0	1/1:5,6:7:6.02:103,6,0	0/1:25,0:20:53.50:97,0,53	0/1:22,0:19:39.07:50,0,39	1/1:6,16:25:47.73:684,48,0	1/1:1,19:20:39.13:672,39,0	1/1:1,17:19:45.05:740,45,0	1/1:9,32:36:66.22:1102,66,0	1/1:1,23:25:63.17:1017,63,0	1/1:14,8:9:24.03:356,24,0	1/1:6,9:12:18.06:310,18,0	1/1:11,17:19:30.10:517,30,0	0/1:17,0:9:8.85:9,0,33	./.	0/1:17,0:14:21.57:22,0,39	1/1:9,13:16:36.12:620,36,0	1/1:5,13:14:36.09:542,36,0	1/1:6,22:25:47.94:791,48,0	0/1:8,10:17:59.16:250,0,59
chr10	60266510	.	CA	C	1379.24	PASS	AB=0.649;AC=29;AF=0.630;AN=46;BaseQRankSum=0.193;DP=540;FS=7.440;HRun=12;HaplotypeScore=29.7313;InbreedingCoeff=0.6709;MQ=20.49;MQ0=157;MQRankSum=-0.537;QD=4.34;ReadPosRankSum=2.792;VQSLOD=-0.3056;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:20,9:10:8.94:70,9,0	0/0:13,0:11:18:0,18,172	./.	./.	1/1:16,11:21:8.91:70,9,0	0/0:18,0:17:8.77:0,9,54	0/0:17,0:7:2.84:0,3,14	0/0:17,0:7:7.17:0,7,37	1/1:12,4:9:2.98:23,3,0	1/1:17,16:23:19.62:279,20,0	1/1:5,9:9:14.92:116,15,0	0/0:15,0:9:3.44:0,3,20	0/0:18,0:13:15.52:0,16,89	1/1:9,8:7:8.96:70,9,0	1/1:17,8:12:5.95:46,6,0	1/1:7,11:6:8.96:70,9,0	1/1:12,5:5:8.95:70,9,0	./.	1/1:15,7:7:17.92:139,18,0	1/1:9,15:15:14.92:116,15,0	./.	0/0:14,0:17:15.94:0,16,96	0/0:10,0:8:5.93:0,6,39	./.	1/1:5,15:15:20.91:162,21,0	0/1:11,13:12:61.42:133,0,61	1/1:8,9:11:8.95:70,9,0	1/1:7,6:12:14.93:116,15,0
chr10	60267167	.	T	TA	2127.17	PASS	AC=24;AF=0.600;AN=40;BaseQRankSum=-1.064;DP=515;FS=1.751;HRun=5;HaplotypeScore=31.0216;InbreedingCoeff=0.7406;MQ=34.21;MQ0=110;MQRankSum=0.611;QD=9.85;ReadPosRankSum=0.797;VQSLOD=-0.0660;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	1/1:1,8:8:15.05:197,15,0	0/0:8,0:5:9.02:0,9,91	0/0:13,0:5:15.04:0,15,159	1/1:1,23:15:15.05:196,15,0	./.	0/0:13,0:5:3.01:0,3,32	0/0:36,0:5:12.01:0,12,120	./.	1/1:1,15:6:15.05:197,15,0	1/1:1,18:14:18.06:236,18,0	./.	0/0:13,0:4:2.56:0,3,32	1/1:5,15:9:3.01:39,3,0	1/1:3,25:10:6.02:79,6,0	./.	./.	./.	1/1:4,10:4:12.04:158,12,0	1/1:4,12:14:27.09:355,27,0	./.	0/0:26,0:18:27.03:0,27,276	0/0:25,0:19:30.07:0,30,322	0/0:19,0:9:3.01:0,3,32	1/1:1,20:19:39.13:513,39,0	1/1:8,15:12:15.05:197,15,0	1/1:4,14:10:3.01:39,3,0	1/1:0,6:5:6.02:79,6,0
chr10	60267831	.	CAAA	C	3902.86	PASS	AB=0.729;AC=39;AF=0.696;AN=56;BaseQRankSum=-2.404;DP=452;FS=1.370;HRun=16;HaplotypeScore=68.0250;InbreedingCoeff=0.2295;MQ=50.45;MQ0=29;MQRankSum=-0.999;QD=9.86;ReadPosRankSum=4.532;VQSLOD=-0.2036;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,12:24:31.32:322,31,0	1/1:5,4:7:1.47:140,1,0	0/0:11,0:7:15.86:0,16,223	0/1:9,0:4:0:0,0,65	0/1:11,7:15:3.67:142,0,4	0/1:10,2:24:4.67:77,0,5	0/1:4,3:15:17.56:80,0,18	0/0:23,0:21:48.09:0,48,697	1/1:5,9:10:15.04:159,15,0	1/1:5,6:11:2.61:193,3,0	1/1:3,14:16:35.83:354,36,0	0/0:9,0:8:8.64:0,9,25	0/1:12,4:15:25.06:77,0,25	0/1:13,4:12:17.01:25,0,17	1/1:8,12:18:17.88:164,18,0	1/1:2,14:14:21.04:226,21,0	1/1:8,10:20:2.92:189,3,0	1/1:3,17:21:43.59:481,44,0	1/1:9,8:13:20.82:226,21,0	1/1:4,8:9:14.96:161,15,0	0/0:6,0:5:0:0,0,0	0/1:6,1:8:16.83:38,0,17	0/1:10,0:13:5.33:5,0,9	0/1:6,0:10:4.29:20,0,4	1/1:2,10:14:26.94:261,27,0	1/1:5,10:16:32.51:296,33,0	1/1:9,14:15:14.99:161,15,0	1/1:0,5:6:11.93:103,12,0
chr10	60268908	.	AG	A	1774.42	PASS	AB=0.519;AC=13;AF=0.232;AN=56;BaseQRankSum=5.767;DP=623;FS=25.327;HRun=1;HaplotypeScore=56.5388;InbreedingCoeff=0.8479;MQ=46.80;MQ0=91;MQRankSum=1.367;QD=11.67;ReadPosRankSum=0.023;VQSLOD=0.3167;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:32:69.10:0,69,953	0/0:8,0:5:9.02:0,9,116	0/0:25,0:3:6.02:0,6,77	0/0:11,0:2:3.01:0,3,46	0/0:33,0:24:23.98:0,24,294	1/1:2,21:19:24.08:334,24,0	1/1:1,19:16:15.01:187,15,0	0/0:29,0:22:60.08:0,60,839	0/0:23,0:21:45.14:0,45,664	0/0:36,0:21:63.16:0,63,850	0/0:17,0:17:27.02:0,27,384	0/1:2,26:27:3.78:502,0,4	1/1:1,20:20:18.06:251,18,0	0/0:20,0:18:39.12:0,39,574	0/0:19,0:19:39.13:0,39,595	0/0:16,0:15:42.06:0,42,572	0/0:26,0:21:48.14:0,48,693	0/0:26,0:24:51.17:0,51,780	0/0:11,0:5:15.05:0,15,229	0/0:22,0:17:33.03:0,33,433	0/0:17,0:16:42.09:0,42,577	1/1:1,22:15:21.07:293,21,0	1/1:2,24:18:20.86:264,21,0	1/1:0,11:7:9.03:126,9,0	0/0:27,0:22:54.13:0,54,791	0/0:22,0:13:39.13:0,39,595	0/0:31,0:18:17.91:0,18,252	0/0:17,0:12:24.03:0,24,299
chr10	60269435	.	TC	T	11633.24	PASS	AB=0.579;AC=32;AF=0.571;AN=56;BaseQRankSum=-4.663;DP=702;FS=4.269;HRun=3;HaplotypeScore=105.7275;InbreedingCoeff=-0.2694;MQ=45.71;MQ0=43;MQRankSum=6.736;QD=18.98;ReadPosRankSum=13.933;VQSLOD=2.2479;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:14,33:43:60.65:859,0,61	1/1:3,11:11:24.08:297,24,0	0/0:26,0:8:20.09:0,20,241	0/0:27,0:10:27.09:0,27,367	0/1:5,18:18:13:270,0,13	0/1:5,16:20:44.07:398,0,44	0/1:7,17:19:30.66:337,0,31	0/0:36,0:27:78.25:0,78,1103	0/1:10,24:33:50.77:666,0,51	0/1:7,15:16:41.29:435,0,41	1/1:1,12:13:27.08:335,27,0	1/1:4,24:26:8.71:649,9,0	0/1:8,16:24:99:489,0,118	0/1:9,14:23:99:419,0,108	1/1:6,20:25:11.34:692,11,0	0/1:9,19:24:31.79:449,0,32	0/1:7,14:13:7.35:270,0,7	0/1:3,26:26:1.72:575,0,2	0/1:4,15:15:41.72:401,0,42	0/1:4,12:13:35.69:301,0,36	1/1:14,50:62:56.69:1191,57,0	0/1:2,15:17:2.90:202,0,3	0/1:3,8:6:28.64:100,0,29	0/1:7,23:29:70.20:634,0,70	1/1:4,15:11:27.08:335,27,0	0/1:4,18:22:60.14:603,0,60	0/1:9,11:20:24.54:393,0,25	1/1:6,12:12:27.08:335,27,0
chr10	60270206	.	C	CACACAC	1502.59	PASS	AB=0.922;AC=31;AF=0.861;AN=36;BaseQRankSum=-0.830;DP=457;FS=12.203;HRun=0;HaplotypeScore=87.5290;InbreedingCoeff=0.1207;MQ=40.82;MQ0=40;MQRankSum=1.867;QD=5.11;ReadPosRankSum=0.760;VQSLOD=0.6320;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:23,9:28:39.24:80,0,39	./.	./.	./.	1/1:15,0:14:9.02:142,9,0	./.	1/1:19,0:17:9.03:153,9,0	./.	0/0:13,0:9:3.01:0,3,60	1/1:17,0:11:3.01:94,3,0	1/1:21,0:15:3.90:82,4,0	1/1:13,0:12:3.01:50,3,0	0/1:20,0:18:0:0,0,0	1/1:9,0:9:3.01:37,3,0	./.	1/1:19,0:18:0.47:1,0,0	1/1:16,0:15:0.47:1,0,0	1/1:15,0:14:2.76:78,3,0	./.	1/1:16,0:10:6.24:114,6,0	1/1:28,0:19:12.04:308,12,0	./.	./.	0/1:18,0:15:11.70:139,0,12	1/1:13,0:10:6.02:118,6,0	1/1:17,0:12:8.06:127,8,0	./.	1/1:5,0:5:3.01:76,3,0
chr10	60271040	.	AC	A	5689.92	PASS	AB=0.667;AC=35;AF=0.625;AN=56;BaseQRankSum=9.572;DP=508;FS=18.797;HRun=1;HaplotypeScore=138.5163;InbreedingCoeff=0.9344;MQ=55.02;MQ0=9;MQRankSum=-12.006;QD=22.05;ReadPosRankSum=-1.835;VQSLOD=3.2042;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,17:24:52.86:521,53,0	1/1:0,12:9:26.92:252,27,0	0/0:36,1:20:16.36:0,16,523	0/0:41,1:19:19.50:0,19,390	1/1:4,13:16:41.11:473,41,0	0/0:28,0:27:81.19:0,81,1188	0/0:12,0:12:36.11:0,36,529	0/0:30,0:30:87.25:0,87,1245	1/1:4,3:6:16.66:131,17,0	1/1:4,8:9:27.02:286,27,0	1/1:3,10:13:36.02:369,36,0	0/0:18,0:18:51.14:0,51,731	0/0:18,0:18:42.11:0,42,581	1/1:6,9:13:38.21:404,38,0	1/1:1,8:7:21.02:229,21,0	1/1:3,6:7:20.97:199,21,0	0/1:9,9:18:3.52:245,0,4	1/1:3,4:7:18.69:185,19,0	1/1:3,18:19:51.28:541,51,0	1/1:4,14:15:41.17:451,41,0	1/1:0,8:8:21.03:262,21,0	0/0:19,0:19:54.16:0,54,768	0/0:26,0:26:66.15:0,66,956	0/0:20,0:20:54.12:0,54,774	1/1:1,19:15:35.96:389,36,0	1/1:8,6:14:29.66:251,30,0	1/1:7,9:12:35.90:372,36,0	1/1:7,3:8:11.44:129,11,0
chr10	60271066	.	AC	A	8391.32	PASS	AB=0.980;AC=51;AF=0.911;AN=56;BaseQRankSum=4.450;DP=560;FS=1.820;HRun=6;HaplotypeScore=126.4125;InbreedingCoeff=0.7814;MQ=70.93;MQ0=11;MQRankSum=-6.405;QD=17.70;ReadPosRankSum=6.559;VQSLOD=3.4025;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,26:30:57.06:566,57,0	1/1:3,7:7:12.01:119,12,0	0/0:52,0:23:39.40:0,39,488	0/1:47,0:17:4.55:5,0,98	1/1:8,12:19:38.84:346,39,0	1/1:3,26:28:75.15:791,75,0	1/1:1,14:15:33.08:353,33,0	0/0:34,0:34:87.23:0,87,1053	1/1:0,8:7:12.01:115,12,0	1/1:4,12:14:29.39:310,29,0	1/1:3,13:16:35.54:321,36,0	1/1:0,17:17:39.10:417,39,0	1/1:1,18:19:36.09:385,36,0	1/1:5,12:16:45.05:442,45,0	1/1:1,6:6:12.02:126,12,0	1/1:0,11:11:20.98:203,21,0	1/1:2,18:20:26.95:258,27,0	1/1:1,7:8:15.04:158,15,0	1/1:6,15:20:46.22:465,46,0	1/1:3,20:21:35.53:400,36,0	1/1:1,3:4:8.11:93,8,0	1/1:0,19:19:54.02:541,54,0	1/1:2,21:23:42.10:450,42,0	1/1:0,19:19:42.11:450,42,0	1/1:5,8:8:20.91:182,21,0	1/1:6,13:15:34.59:311,35,0	1/1:9,14:19:32.88:298,33,0	1/1:0,16:14:27.07:285,27,0
chr10	60272103	.	AT	A	2090.90	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=0.500;DP=458;FS=14.667;HRun=6;HaplotypeScore=73.0280;InbreedingCoeff=0.9585;MQ=58.77;MQ0=6;MQRankSum=5.113;QD=24.03;ReadPosRankSum=2.098;VQSLOD=2.3864;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:42.14:0,42,553	0/0:11,0:11:24.08:0,24,316	0/0:11,0:7:6.67:0,7,136	0/0:10,0:5:6.02:0,6,79	0/0:26,0:26:63.20:0,63,829	1/1:2,10:10:24.06:258,24,0	1/1:0,15:15:36.09:387,36,0	0/0:34,0:34:99:0,99,1239	0/0:9,0:8:21.07:0,21,276	0/0:18,0:17:45.13:0,45,576	0/0:27,0:26:60.15:0,60,769	1/1:0,11:11:30.08:322,30,0	1/1:0,12:12:36.09:387,36,0	0/0:10,0:10:27.09:0,27,355	0/0:16,0:14:36.09:0,36,444	0/0:23,0:23:63.16:0,63,814	0/0:18,0:17:42.05:0,42,513	0/0:9,0:8:21.07:0,21,276	0/0:16,0:16:43.93:0,44,522	0/0:25,0:23:57.12:0,57,728	0/0:13,0:13:33.06:0,33,415	1/1:0,9:9:24.06:258,24,0	1/1:0,20:20:48.12:516,48,0	1/1:0,8:7:15.04:161,15,0	0/0:22,0:22:51.10:0,51,636	0/0:27,0:25:72.23:0,72,934	0/0:20,0:19:42.08:0,42,533	0/0:11,0:11:24.08:0,24,316
chr10	60272316	.	C	CAA	243.36	PASS	AB=1.000;AC=3;AF=0.38;AN=8;BaseQRankSum=-2.177;DP=59;FS=6.117;HRun=13;HaplotypeScore=32.3511;MQ=55.46;MQ0=16;MQRankSum=-1.540;QD=11.06;ReadPosRankSum=0.690;VQSLOD=0.7201;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:15,0:5:0.25:0,0,25	0/0:16,0:5:4.05:0,4,16	./.	./.	./.	1/1:13,4:16:32.10:313,32,0	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	0/1:1,0:1:0:0,0,0	./.	./.	./.	./.	./.
chr10	60272621	.	ACG	A	12087.49	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=5.288;DP=783;FS=1.140;HRun=0;HaplotypeScore=159.0820;InbreedingCoeff=0.9959;MQ=44.33;MQ0=23;MQRankSum=3.926;QD=26.11;ReadPosRankSum=6.509;VQSLOD=5.3173;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:17,23:35:69.14:974,69,0	1/1:3,6:8:20.99:283,21,0	0/0:52,0:24:40.95:0,41,762	0/0:48,0:20:15.08:0,15,408	1/1:12,19:24:63.09:829,63,0	0/0:25,0:21:45.09:0,45,843	0/0:27,0:19:45.87:0,46,851	0/0:38,0:37:91.89:0,92,1694	1/1:4,24:22:36.03:537,36,0	1/1:4,20:18:51.04:769,51,0	1/1:5,26:26:51.02:751,51,0	0/0:27,0:21:36.98:0,37,835	0/0:30,0:20:45.91:0,46,772	1/1:16,19:25:54.10:730,54,0	1/1:11,22:27:60.18:927,60,0	1/1:7,16:17:39.10:606,39,0	1/1:14,20:34:69.15:993,69,0	1/1:6,13:17:48.09:691,48,0	1/1:6,8:10:30.03:410,30,0	1/1:7,31:37:63.02:947,63,0	1/1:13,33:40:72.14:1044,72,0	0/0:23,0:18:45.15:0,45,883	0/0:20,0:15:32.82:0,33,587	0/0:30,0:24:51.13:0,51,937	1/1:8,11:16:24.06:341,24,0	1/1:8,8:12:35.98:477,36,0	1/1:2,13:13:30.09:462,30,0	1/1:1,6:7:21.05:316,21,0
chr10	60272622	.	CGG	C	5638.02	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=7.200;DP=783;FS=2.121;HRun=2;HaplotypeScore=183.7611;InbreedingCoeff=0.9700;MQ=44.49;MQ0=23;MQRankSum=2.897;QD=12.15;ReadPosRankSum=10.700;VQSLOD=0.7858;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:40,0:35:51.84:433,52,0	1/1:10,0:9:13.65:124,14,0	0/0:47,4:24:9.75:0,10,827	0/0:44,2:19:5.98:0,6,419	1/1:31,0:24:41.05:355,41,0	0/0:24,0:20:47.97:0,48,822	0/0:27,0:19:46.03:0,46,850	0/0:38,0:37:99:0,102,1909	1/1:29,0:23:30.33:252,30,0	1/1:25,1:20:52.20:398,52,0	1/1:31,0:26:42.69:344,43,0	0/0:27,0:21:47.94:0,48,740	0/0:31,0:21:35.25:0,35,760	1/1:35,0:25:36.35:318,36,0	1/1:32,1:27:53.87:443,54,0	1/1:22,0:16:36.83:310,37,0	1/1:34,0:33:54.34:453,54,0	1/1:19,0:17:38.92:330,39,0	1/1:13,0:9:21.44:184,21,0	1/1:37,1:37:54.24:450,54,0	1/1:45,1:40:41.64:474,42,0	0/0:24,0:18:48.07:0,48,882	0/0:19,0:14:26.83:0,27,523	0/0:30,0:24:51.15:0,51,876	1/1:17,0:14:18.93:162,19,0	1/1:17,0:13:24.38:211,24,0	1/1:16,0:14:27.44:235,27,0	1/1:7,0:7:17.99:164,18,0
chr10	60272632	.	T	TAC	2197.03	PASS	AB=0.921;AC=12;AF=0.214;AN=56;BaseQRankSum=-3.140;DP=834;FS=7.714;HRun=0;HaplotypeScore=212.0668;InbreedingCoeff=0.7983;MQ=44.15;MQ0=29;MQRankSum=-0.559;QD=11.81;ReadPosRankSum=-0.817;VQSLOD=2.5048;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:37:83.97:0,84,995	0/0:9,0:8:23.96:0,24,251	0/0:44,0:20:39.02:0,39,464	0/0:47,0:18:17.48:0,17,238	0/0:29,0:23:65.92:0,66,735	1/1:24,2:20:24.04:322,24,0	0/1:26,2:19:11.23:377,0,11	0/0:43,0:42:87.23:0,87,1024	0/0:29,0:22:45.05:0,45,514	0/0:34,0:27:72.17:0,72,827	0/0:33,0:28:44.32:0,44,544	1/1:18,3:14:15.05:214,15,0	1/1:31,2:22:41.45:578,41,0	0/0:37,0:27:60.10:0,60,713	0/0:35,0:29:60.09:0,60,714	0/0:25,0:18:38.95:0,39,419	0/0:40,0:37:81.15:0,81,993	0/0:23,0:19:51.11:0,51,616	0/0:18,0:10:27.08:0,27,330	0/0:38,0:37:65.96:0,66,768	0/0:58,0:50:78:0,78,902	1/1:28,2:17:32.95:370,33,0	1/1:16,2:12:15.04:179,15,0	0/1:27,3:23:9.04:338,0,9	0/0:16,0:13:26.95:0,27,283	0/0:22,0:18:51.15:0,51,621	0/0:17,0:15:33.04:0,33,374	0/0:7,0:7:21:0,21,229
chr10	60272646	.	A	AAAC	748.96	PASS	AB=0.780;AC=10;AF=0.179;AN=56;BaseQRankSum=4.918;DP=856;FS=13.969;HRun=0;HaplotypeScore=241.8838;InbreedingCoeff=0.5786;MQ=44.49;MQ0=29;MQRankSum=-3.182;QD=4.59;ReadPosRankSum=-6.525;VQSLOD=-0.0884;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:45:99:0,101,1657	0/0:9,0:8:21.07:0,21,370	0/0:45,0:15:36.12:0,36,607	0/0:51,0:13:21:0,21,434	0/0:25,0:23:50.84:0,51,847	1/1:15,6:16:6.70:122,7,0	0/1:15,6:17:54.08:86,0,54	0/0:40,0:39:99:0,108,1686	0/0:30,0:24:44.44:0,44,710	0/0:40,0:33:90.07:0,90,1436	0/0:29,0:24:52.75:0,53,850	1/1:8,4:6:8.79:157,9,0	1/1:14,14:18:13.53:326,14,0	0/0:38,0:31:64.19:0,64,1098	0/0:44,0:38:76.87:0,77,1234	0/0:24,0:22:30.78:0,31,473	0/0:43,0:40:90.22:0,90,1505	0/0:24,0:21:63.21:0,63,1034	0/0:20,0:10:30.10:0,30,492	0/0:39,0:37:65.14:0,65,1077	0/0:71,0:64:99:0,104,1720	0/1:14,9:12:37.78:79,0,38	0/1:13,1:8:0.95:31,0,1	0/1:26,4:24:2.78:100,0,3	0/0:17,0:14:23.53:0,24,363	0/0:26,0:23:66.68:0,67,1089	0/0:18,0:16:32.74:0,33,515	0/0:9,0:7:15.05:0,15,245
chr10	60272656	.	CAGAG	C	121.13	PASS	AB=0.876;AC=4;AF=0.071;AN=56;BaseQRankSum=3.486;DP=886;FS=5.676;HRun=0;HaplotypeScore=258.4693;InbreedingCoeff=0.3563;MQ=47.00;MQ0=28;MQRankSum=0.016;QD=1.89;ReadPosRankSum=-1.018;VQSLOD=1.3620;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:45:96.30:0,96,2431	0/0:11,0:9:27.09:0,27,657	0/0:49,0:18:40.37:0,40,766	0/0:54,0:18:36.23:0,36,627	0/0:24,0:21:51.17:0,51,1291	0/1:16,6:16:0.52:1,0,14	0/0:19,3:11:1.30:0,1,30	0/0:47,0:43:99:0,120,2895	0/0:29,0:23:42.14:0,42,1056	0/0:46,0:38:99:0,99,2427	0/0:28,0:23:46.10:0,46,1318	0/0:19,2:14:22.09:0,22,217	0/1:27,1:17:99:128,0,126	0/0:39,0:32:66.21:0,66,1693	0/0:44,0:38:75.23:0,75,1848	0/0:25,0:22:39.13:0,39,969	0/0:47,0:44:99:0,111,2597	0/0:26,0:23:69.17:0,69,1615	0/0:18,0:9:27.09:0,27,682	0/0:36,1:35:72.14:0,72,1704	0/0:80,0:72:99:0,120,3087	0/0:20,3:9:5.43:0,5,44	1/1:12,2:7:6.02:87,6,0	0/0:21,4:19:14.78:0,15,157	0/0:19,0:17:35.64:0,36,820	0/0:32,0:28:64.66:0,65,1831	0/0:19,0:18:42.13:0,42,960	0/0:8,0:6:18.06:0,18,397
chr10	60272675	.	ACT	A	6626.44	PASS	AB=1.000;AC=49;AF=0.875;AN=56;BaseQRankSum=7.382;DP=920;FS=2.707;HRun=0;HaplotypeScore=191.0403;InbreedingCoeff=0.4656;MQ=46.43;MQ0=41;MQRankSum=5.711;QD=8.20;ReadPosRankSum=9.542;VQSLOD=3.8825;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:47,2:42:13.52:402,14,0	0/1:10,0:8:5.68:132,0,6	0/0:64,0:12:19.93:0,20,373	0/1:76,0:22:7.67:8,0,418	1/1:27,0:23:31.26:325,31,0	1/1:20,0:15:5.79:60,6,0	1/1:18,1:10:9:81,9,0	0/0:46,0:42:99:0,123,2111	1/1:35,0:28:22.39:272,22,0	1/1:44,0:37:59.11:544,59,0	1/1:22,1:18:4.88:205,5,0	1/1:20,5:16:23.98:232,24,0	1/1:23,4:17:29.53:253,30,0	1/1:36,1:29:53.34:380,53,0	1/1:41,0:34:37.01:358,37,0	1/1:26,0:23:13.52:214,14,0	1/1:50,0:46:55.12:514,55,0	1/1:26,2:22:53.28:360,53,0	1/1:16,1:7:20.80:147,21,0	0/1:30,0:28:1.56:233,0,2	1/1:88,0:76:87.50:693,88,0	1/1:20,1:6:5.88:48,6,0	1/1:12,3:9:3.01:46,3,0	1/1:21,4:19:11.89:97,12,0	1/1:19,0:17:35.37:224,35,0	1/1:32,1:28:58.39:504,58,0	1/1:17,0:16:35.53:236,36,0	1/1:6,0:3:8.87:58,9,0
chr10	60272677	.	TCA	T	13784.96	PASS	AB=1.000;AC=48;AF=0.857;AN=56;BaseQRankSum=6.387;DP=924;FS=3.016;HRun=0;HaplotypeScore=163.2617;InbreedingCoeff=0.6475;MQ=46.42;MQ0=40;MQRankSum=6.689;QD=18.78;ReadPosRankSum=7.001;VQSLOD=4.5041;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,36:42:75.23:1058,75,0	1/1:3,7:8:21.04:271,21,0	0/0:67,0:12:20.06:0,20,374	0/0:75,1:22:17.96:0,18,529	1/1:7,20:23:54.18:791,54,0	1/1:19,0:14:3.04:10,3,0	1/1:21,0:12:2.10:5,2,0	0/0:47,0:43:99:0,114,1981	1/1:21,15:29:48.12:677,48,0	1/1:5,39:37:96.32:1393,96,0	1/1:11,12:18:39.13:556,39,0	1/1:25,0:17:11.11:42,11,0	0/1:27,0:17:32.68:33,0,35	1/1:9,29:30:54.17:775,54,0	1/1:13,28:34:63.20:904,63,0	1/1:2,26:25:36.12:522,36,0	1/1:15,35:46:84.20:1178,84,0	1/1:10,17:21:54.18:782,54,0	1/1:5,12:7:21.07:309,21,0	1/1:7,20:25:42.14:615,42,0	1/1:20,66:74:99:1577,108,0	0/1:21,0:6:1.59:2,0,2	1/1:15,0:9:2.98:21,3,0	1/1:26,0:19:1.04:4,1,0	1/1:2,19:19:36.12:523,36,0	1/1:3,31:29:69.68:1121,70,0	1/1:3,13:16:33.11:486,33,0	1/1:0,6:3:9.03:133,9,0
chr10	60272752	.	GAC	G	1172.23	PASS	AB=0.976;AC=16;AF=0.308;AN=52;BaseQRankSum=4.516;DP=767;FS=14.155;HRun=0;HaplotypeScore=123.7417;InbreedingCoeff=0.7466;MQ=38.10;MQ0=62;MQRankSum=0.147;QD=6.17;ReadPosRankSum=-0.314;VQSLOD=2.5837;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:20:15.04:0,15,226	0/0:5,0:3:6.02:0,6,88	./.	./.	0/0:21,0:13:21:0,21,269	1/1:3,11:9:9:99,9,0	1/1:6,13:15:6.02:78,6,0	0/0:51,0:41:99:0,99,1568	0/0:40,0:26:32.90:0,33,448	0/0:31,0:22:54.06:0,54,722	0/0:15,0:12:17.26:0,17,218	1/1:4,27:27:26.75:342,27,0	1/1:6,14:15:31.65:385,32,0	0/0:35,0:24:32.90:0,33,418	0/0:25,0:17:30.04:0,30,423	0/0:27,0:18:17.98:0,18,254	0/0:27,0:25:20.57:0,21,290	0/1:25,0:15:14:14,0,342	0/0:32,0:18:25.41:0,25,549	0/0:30,0:24:51.07:0,51,737	0/0:92,0:75:42.06:0,42,590	1/1:3,22:14:14.92:195,15,0	1/1:3,17:17:11.98:155,12,0	1/1:5,11:14:5.96:78,6,0	0/0:20,0:17:28.69:0,29,401	0/1:19,1:11:8.81:9,0,248	0/0:19,0:12:17.99:0,18,242	0/0:11,0:9:23.40:0,23,282
chr10	60272762	.	CAA	C	404.60	PASS	AB=0.945;AC=17;AF=0.315;AN=54;BaseQRankSum=4.694;DP=772;FS=6.699;HRun=3;HaplotypeScore=120.6234;InbreedingCoeff=0.1127;MQ=36.20;MQ0=64;MQRankSum=-0.206;QD=1.45;ReadPosRankSum=-0.158;VQSLOD=-0.6707;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:18:12.03:0,12,139	0/0:4,0:2:6.02:0,6,69	1/1:29,0:1:2.04:6,2,0	./.	0/0:16,5:13:12.03:0,12,138	1/1:13,0:7:3.22:20,3,0	1/1:14,0:10:2.85:20,3,0	0/0:51,0:41:99:0,120,1828	0/0:38,3:26:20.94:0,21,251	0/0:29,6:21:12.54:0,13,328	0/0:15,0:11:11.91:0,12,120	0/1:34,0:26:86.16:86,0,94	1/1:21,0:15:13.09:155,13,0	0/0:33,2:24:18.66:0,19,227	0/0:28,3:21:24:0,24,256	0/0:31,2:20:3.15:0,3,189	0/0:24,2:25:7.96:0,8,180	0/1:23,0:12:27.21:27,0,222	0/1:29,2:19:41.04:41,0,306	0/0:27,5:24:39.11:0,39,436	0/0:95,2:76:31.58:0,32,318	0/1:24,0:12:25.90:26,0,46	0/1:19,0:15:5.48:62,0,5	0/1:14,0:12:12.29:13,0,12	0/1:17,1:14:1.90:2,0,215	0/1:18,4:11:94:94,0,116	0/1:12,5:10:6.24:6,0,133	0/0:9,1:7:14.99:0,15,164
chr10	60272776	.	GAC	G	314.27	PASS	AB=0.857;AC=8;AF=0.143;AN=56;BaseQRankSum=2.508;DP=789;FS=7.509;HRun=0;HaplotypeScore=116.3238;InbreedingCoeff=-0.1970;MQ=32.31;MQ0=90;MQRankSum=-4.366;QD=1.54;ReadPosRankSum=-1.653;VQSLOD=1.5937;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,3:14:9.02:0,9,119	0/0:5,1:2:6.01:0,6,59	0/0:37,0:3:5.85:0,6,64	0/0:47,0:4:2.87:0,3,15	0/0:12,7:10:5.60:0,6,41	0/1:16,1:10:17.94:27,0,18	0/1:13,2:6:25.12:25,0,65	0/0:51,0:42:99:0,99,1515	0/0:29,5:15:14.23:0,14,150	0/1:22,12:16:12.85:13,0,185	0/0:11,4:10:2.90:0,3,42	0/0:30,0:23:50.11:0,50,435	0/1:18,0:13:1.44:1,0,156	0/1:32,4:22:24.60:25,0,217	0/0:25,7:19:18.05:0,18,286	0/1:25,8:17:15.63:16,0,193	0/0:23,3:22:10.83:0,11,208	0/0:25,2:14:5.81:0,6,155	0/1:21,3:16:96.10:96,0,341	0/0:23,10:22:27.06:0,27,340	0/0:86,5:61:18.03:0,18,218	0/0:23,2:11:20.74:0,21,190	0/0:17,1:12:11.69:0,12,125	0/0:19,0:14:8.84:0,9,110	0/0:17,3:13:23.43:0,23,304	0/1:15,12:13:99:238,0,184	0/0:13,6:10:14.38:0,14,156	0/0:9,1:7:14.94:0,15,202
chr10	60272796	.	CACCG	C	331.52	PASS	AB=0.993;AC=24;AF=0.429;AN=56;BaseQRankSum=5.015;DP=821;FS=9.780;HRun=0;HaplotypeScore=105.9637;InbreedingCoeff=-0.0647;MQ=29.36;MQ0=134;MQRankSum=1.688;QD=0.62;ReadPosRankSum=-2.527;VQSLOD=0.9757;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:7:0:0,0,0	0/0:7,0:2:2.90:0,3,17	0/0:70,0:10:27.05:0,27,364	0/0:71,0:9:7.95:0,8,207	0/1:21,0:7:2.18:39,0,2	0/0:17,0:7:2:0,2,14	1/1:15,0:5:2.93:37,3,0	0/0:46,0:41:99:0,114,2513	0/1:34,0:14:2.13:29,0,2	0/1:38,0:8:4:54,0,4	0/1:20,0:10:0.11:0,0,0	0/1:25,2:17:3.07:3,0,22	0/1:18,1:11:4.67:98,0,5	1/1:33,0:17:6.99:25,7,0	0/0:31,0:15:5.92:0,6,90	0/1:29,0:12:12.97:13,0,94	0/1:27,0:18:29.39:29,0,99	0/1:24,0:10:23.52:30,0,24	0/1:21,0:11:7.41:7,0,270	0/1:27,0:13:6.73:30,0,7	0/1:78,0:45:17.99:18,0,39	0/1:27,0:7:0:0,0,0	0/0:12,1:6:0.72:0,1,13	1/1:14,2:9:0.28:2,0,0	1/1:22,0:10:1.25:3,1,0	0/0:30,0:17:36.38:0,36,573	0/1:19,0:8:33.92:35,0,34	0/1:12,0:7:15.83:16,0,21
chr10	60272798	.	CCG	C	621.35	PASS	AB=0.941;AC=34;AF=0.607;AN=56;BaseQRankSum=4.945;DP=788;FS=12.033;HRun=0;HaplotypeScore=87.8954;InbreedingCoeff=0.1582;MQ=28.47;MQ0=137;MQRankSum=2.607;QD=1.19;ReadPosRankSum=-1.514;VQSLOD=0.6735;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:26,1:7:0:0,0,0	1/1:6,1:2:0.90:20,1,0	0/0:74,0:11:27.12:0,27,342	0/0:73,0:9:6.70:0,7,156	1/1:21,0:8:5.89:60,6,0	0/0:16,1:7:0.49:0,0,7	1/1:13,0:3:2.52:10,3,0	0/0:45,0:40:99:0,114,2014	1/1:32,0:12:8.26:50,8,0	0/1:36,0:7:21.61:75,0,22	1/1:21,0:10:2.84:14,3,0	1/1:25,0:15:4.66:16,5,0	1/1:15,1:8:8.81:85,9,0	1/1:27,1:13:8.40:52,8,0	0/0:28,2:14:5.73:0,6,54	0/1:28,0:11:15.12:15,0,40	0/1:16,8:15:52.97:88,0,53	0/1:22,1:9:23.48:50,0,23	0/1:22,0:11:16.72:17,0,269	1/1:27,0:12:11.66:84,12,0	0/1:68,9:44:29.37:39,0,29	0/1:23,0:6:0:0,0,0	0/1:9,2:4:0.23:1,0,0	1/1:13,1:7:1.46:4,1,0	1/1:18,1:8:3:26,3,0	0/0:28,0:15:21.08:0,21,493	0/1:17,0:8:5.35:47,0,5	1/1:9,0:4:2.56:22,3,0
chr10	60272814	.	C	CAG	1189.75	PASS	AB=0.838;AC=13;AF=0.232;AN=56;BaseQRankSum=-0.912;DP=969;FS=2.730;HRun=0;HaplotypeScore=105.1977;InbreedingCoeff=-0.0242;MQ=25.18;MQ0=218;MQRankSum=-2.393;QD=3.11;ReadPosRankSum=0.133;VQSLOD=1.7297;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,8:9:0:0,0,0	0/0:11,2:4:2.94:0,3,18	0/0:54,0:8:16.25:0,16,205	0/0:65,0:8:14.63:0,15,154	0/0:18,11:10:2.82:0,3,23	0/0:24,0:11:0:0,0,0	1/1:25,0:9:0.40:1,0,0	0/0:33,0:22:63.14:0,63,872	0/0:33,8:17:9.88:0,10,87	0/1:34,15:13:99:151,0,101	0/1:14,13:11:0:0,0,0	0/0:29,0:13:2.47:0,2,28	0/0:21,0:9:4.87:0,5,69	0/0:28,7:18:1.10:0,1,58	0/0:31,9:20:2.82:0,3,34	0/1:18,12:14:45.54:46,0,83	0/1:26,6:18:12.93:13,0,173	0/1:29,3:10:63.51:64,0,76	0/1:32,9:14:35.89:321,0,36	0/0:14,15:11:6:0,6,60	0/0:95,13:56:2.80:0,3,34	0/1:26,0:9:0.15:0,0,0	0/1:22,0:9:1.44:1,0,12	0/1:16,0:6:0.12:0,0,0	0/1:24,11:14:0:0,0,1	0/1:29,18:21:76.89:702,0,77	0/0:14,8:8:14.97:0,15,157	0/0:7,2:3:3.01:0,3,46
chr10	60272818	.	CAG	C	65.02	PASS	AB=0.986;AC=20;AF=0.357;AN=56;BaseQRankSum=3.878;DP=953;FS=4.993;HRun=0;HaplotypeScore=97.2323;InbreedingCoeff=0.2538;MQ=23.57;MQ0=221;MQRankSum=3.030;QD=0.17;ReadPosRankSum=-5.515;VQSLOD=0.2518;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:34,0:11:0:0,0,0	0/1:14,0:5:0.01:0,0,0	0/0:47,0:7:15.09:0,15,122	0/0:59,0:7:9.34:0,9,88	1/1:28,1:10:2.37:8,2,0	1/1:23,0:10:1.25:3,1,0	0/0:26,1:9:2.10:0,2,7	0/0:33,0:22:57.01:0,57,704	0/1:38,0:16:13.47:13,0,47	0/0:47,0:11:20.96:0,21,203	0/1:28,0:12:0.11:0,0,0	1/1:25,0:9:8.72:58,9,0	0/1:18,1:7:14.58:21,0,15	0/1:32,0:17:15.47:15,0,67	0/1:38,1:19:2.46:2,0,30	0/1:30,0:14:8.83:9,0,47	0/0:30,2:18:1.69:0,2,182	0/0:33,0:11:17.89:0,18,196	0/0:39,0:12:11.36:0,11,241	0/0:32,0:13:2.80:0,3,13	0/0:114,0:60:3:0,3,35	1/1:25,2:9:1.03:21,1,0	0/0:18,1:7:0.23:0,0,1	1/1:19,0:9:4.66:28,5,0	1/1:34,0:14:2.75:22,3,0	0/0:47,0:19:36.51:0,37,558	0/0:22,0:8:10.22:0,10,109	0/0:9,0:3:3.01:0,3,31
chr10	60272892	.	CAT	C	4796.41	PASS	AB=0.986;AC=45;AF=0.804;AN=56;BaseQRankSum=-0.076;DP=784;FS=7.278;HRun=0;HaplotypeScore=123.0899;InbreedingCoeff=0.2939;MQ=43.69;MQ0=79;MQRankSum=3.926;QD=6.98;ReadPosRankSum=5.921;VQSLOD=3.6705;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:12:4.89:62,5,0	1/1:15,0:13:15.15:195,15,0	0/0:32,0:21:48.33:0,48,434	0/0:24,0:17:47.20:0,47,357	1/1:28,0:19:10.29:170,10,0	1/1:27,0:19:3.23:146,3,0	1/1:25,0:14:11.99:100,12,0	0/0:41,0:34:85.89:0,86,734	1/1:30,0:19:9.30:140,9,0	1/1:36,0:28:72.66:628,73,0	1/1:19,0:13:23.97:198,24,0	1/1:27,0:20:9.42:169,9,0	0/1:20,0:11:14.08:133,0,14	0/1:30,1:25:34.28:167,0,34	0/1:24,0:19:24.31:73,0,24	1/1:29,0:24:17.83:240,18,0	1/1:28,1:22:2.49:165,2,0	0/1:27,0:19:22.57:134,0,23	1/1:19,0:10:25.45:191,25,0	1/1:33,0:28:19.33:295,19,0	1/1:65,1:46:6.18:62,6,0	1/1:35,0:27:50.44:428,50,0	1/1:29,0:21:27.57:208,28,0	0/1:24,1:20:5.23:142,0,5	1/1:42,0:31:5.04:240,5,0	1/1:23,2:14:19.89:327,20,0	1/1:23,0:15:1.84:137,2,0	1/1:6,0:5:6.87:49,7,0
chr10	60274647	.	GCACACACACACACACGCACACACACACACA	G	1829.01	PASS	AB=0.938;AC=23;AF=0.442;AN=52;BaseQRankSum=3.869;DP=436;FS=3.204;HRun=0;HaplotypeScore=220.3215;InbreedingCoeff=0.7275;MQ=41.05;MQ0=46;MQRankSum=-3.612;QD=10.70;ReadPosRankSum=0.746;VQSLOD=2.5848;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:40:39.74:0,40,577	1/1:7,0:6:14.94:118,15,0	1/1:15,0:2:2.97:20,3,0	0/0:19,0:2:0.89:0,1,2	0/0:14,0:13:11.24:0,11,156	0/0:9,0:11:11.94:0,12,93	0/0:20,0:16:26.97:0,27,543	0/0:24,0:15:11.30:0,11,156	0/0:8,0:8:11.96:0,12,175	1/1:10,0:7:15.79:113,16,0	./.	0/0:9,0:8:11.78:0,12,111	0/0:11,0:6:14.90:0,15,148	1/1:11,1:11:5.94:42,6,0	1/1:8,0:7:2.68:11,3,0	./.	1/1:18,0:16:12.47:111,12,0	0/0:32,0:28:56.73:0,57,890	1/1:12,0:10:8.71:82,9,0	1/1:7,0:6:2.97:20,3,0	1/1:25,0:21:5.99:49,6,0	0/0:8,0:7:8.96:0,9,100	0/1:14,0:11:9.27:9,0,60	0/0:17,0:17:14.18:0,14,102	1/1:22,2:18:24.50:633,25,0	0/0:18,0:15:30.09:0,30,1090	1/1:14,3:14:26.71:809,27,0	0/0:10,0:7:8.91:0,9,129
chr10	60274663	.	GCACACACACACACACACA	G	876.65	PASS	AB=0.899;AC=11;AF=0.324;AN=34;BaseQRankSum=3.137;DP=443;FS=0.000;HRun=0;HaplotypeScore=180.3358;InbreedingCoeff=0.0572;MQ=39.39;MQ0=49;MQRankSum=1.945;QD=5.10;ReadPosRankSum=1.929;VQSLOD=2.0619;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,2:35:2.92:0,3,17	./.	./.	./.	1/1:8,9:15:0.47:1,0,0	./.	0/0:20,0:14:3.01:0,3,101	0/0:18,0:8:11.92:0,12,101	./.	0/0:14,0:11:3.79:0,4,12	./.	./.	0/0:17,0:12:0.70:0,1,42	0/0:14,0:12:0.47:0,0,1	./.	1/1:7,0:6:0.51:1,1,0	0/0:24,0:21:5.60:0,6,48	0/1:27,0:30:16.22:202,0,16	0/0:15,0:10:4.48:0,4,14	./.	0/1:28,0:23:0.16:0,0,0	0/0:9,0:7:3:0,3,25	./.	1/1:21,0:20:3.35:17,3,0	0/1:27,0:18:33.03:237,0,33	0/1:10,9:16:5.17:155,0,5	0/1:18,0:15:6:359,0,6	./.
chr10	60274697	.	A	ATG	3756.35	PASS	AC=32;AF=0.593;AN=54;BaseQRankSum=-0.447;DP=418;FS=11.010;HRun=0;HaplotypeScore=79.1276;InbreedingCoeff=0.7475;MQ=54.17;MQ0=42;MQRankSum=-1.130;QD=16.05;ReadPosRankSum=3.700;VQSLOD=2.8187;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:6,12:19:4.74:0,5,21	1/1:4,0:4:9.03:135,9,0	0/0:16,0:8:9.06:0,9,246	0/0:22,0:13:14.73:0,15,316	1/1:15,0:14:11.87:161,12,0	0/0:17,0:17:42.13:0,42,619	0/0:20,0:15:36.07:0,36,496	0/0:15,0:13:37.35:0,37,493	1/1:5,1:6:15.05:247,15,0	1/1:3,10:10:30.09:511,30,0	1/1:15,0:11:3.01:50,3,0	0/0:8,0:7:6.02:0,6,89	0/0:15,0:11:18.06:0,18,264	1/1:4,8:10:0.88:57,1,0	1/1:3,10:12:2.60:10,3,0	1/1:2,4:5:6.02:122,6,0	1/1:2,19:20:21.07:351,21,0	1/1:26,2:24:20.09:465,20,0	1/1:1,10:11:0.58:354,1,0	./.	1/1:2,18:20:3.01:61,3,0	0/0:11,0:9:24.08:0,24,358	0/0:9,0:8:3.01:0,3,46	0/0:20,0:19:26.78:0,27,393	1/1:5,17:18:12.94:234,13,0	1/1:17,0:13:24.06:343,24,0	1/1:5,8:12:18.01:245,18,0	1/1:17,0:14:27.09:410,27,0
chr10	60274853	.	A	AT	12841.80	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-5.725;DP=482;FS=4.949;HRun=6;HaplotypeScore=45.8616;InbreedingCoeff=0.9576;MQ=65.40;MQ0=2;MQRankSum=-1.783;QD=29.66;ReadPosRankSum=6.469;VQSLOD=4.5926;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,16:21:36.05:433,36,0	1/1:0,12:12:33.11:415,33,0	0/0:15,0:13:33.07:0,33,335	0/0:10,0:9:15.03:0,15,152	1/1:5,21:26:60.15:737,60,0	1/1:2,22:24:54.17:677,54,0	1/1:0,12:12:27.09:340,27,0	0/0:24,0:24:72.15:0,72,725	1/1:1,15:16:33.11:415,33,0	1/1:3,21:24:63.18:766,63,0	1/1:2,29:31:87.28:1094,87,0	1/1:3,7:10:15.05:189,15,0	1/1:1,15:17:29.91:375,30,0	1/1:1,11:12:24.08:302,24,0	1/1:3,10:13:27.09:340,27,0	1/1:0,8:8:15.05:189,15,0	1/1:2,20:21:48.15:604,48,0	1/1:3,15:18:45.14:558,45,0	1/1:5,7:10:24.08:302,24,0	1/1:0,27:27:81.22:998,81,0	1/1:3,6:9:18.06:227,18,0	1/1:1,13:14:39.12:491,39,0	1/1:3,17:20:48.15:604,48,0	1/1:2,6:8:9.03:113,9,0	1/1:1,33:34:99:1241,99,0	1/1:2,12:14:36.12:453,36,0	1/1:1,14:15:39.12:490,39,0	1/1:0,13:13:39.12:491,39,0
chr10	60275996	.	C	CT	9030.18	PASS	AB=0.596;AC=34;AF=0.630;AN=54;BaseQRankSum=-10.409;DP=613;FS=0.454;HRun=5;HaplotypeScore=36.2699;InbreedingCoeff=0.7807;MQ=50.88;MQ0=28;MQRankSum=3.537;QD=21.05;ReadPosRankSum=4.283;VQSLOD=3.5776;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:14,35:44:84.27:1105,84,0	1/1:7,6:12:6.02:79,6,0	./.	0/0:15,0:1:2.60:0,3,10	1/1:9,9:17:15.05:197,15,0	0/0:19,0:19:21.05:0,21,226	0/0:18,0:18:21.03:0,21,217	0/0:32,0:21:60.12:0,60,635	1/1:4,16:20:42.14:553,42,0	1/1:3,14:14:9.87:451,10,0	1/1:3,17:20:30.09:395,30,0	0/0:10,0:10:15.04:0,15,161	0/0:13,0:13:30.08:0,30,322	1/1:2,19:21:54.18:711,54,0	1/1:2,18:20:48.16:632,48,0	1/1:7,20:27:54.18:711,54,0	1/1:7,19:23:30.10:395,30,0	1/1:7,20:25:41.35:520,41,0	0/1:7,11:14:31.30:319,0,31	1/1:2,19:21:30.05:375,30,0	1/1:19,25:42:30.10:395,30,0	0/0:18,0:18:18.04:0,18,193	0/0:26,0:26:39.08:0,39,410	0/0:26,0:25:35.71:0,36,387	1/1:4,18:22:45.15:592,45,0	0/1:8,24:31:47.73:796,0,48	1/1:3,18:20:48.13:609,48,0	1/1:6,7:13:15.05:197,15,0
chr10	60276588	.	CTCTCTCTCTT	C	975.95	PASS	AB=1.000;AC=30;AF=0.600;AN=50;BaseQRankSum=-2.547;DP=487;FS=11.697;HRun=0;HaplotypeScore=115.5137;InbreedingCoeff=0.0192;MQ=36.27;MQ0=83;MQRankSum=-0.961;QD=2.73;ReadPosRankSum=-3.882;VQSLOD=0.1697;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:22:10.83:11,0,12	0/1:6,0:4:0:0,0,0	0/0:15,0:1:3:0,3,27	0/1:22,0:6:4.24:4,0,22	1/1:19,0:14:3.38:18,3,0	1/1:18,0:18:2.67:81,3,0	1/1:18,0:13:8.83:68,9,0	0/0:31,0:27:6.73:0,7,349	1/1:20,0:16:11.84:150,12,0	0/1:19,0:11:59.81:60,0,206	0/1:9,0:6:0.01:0,0,1	1/1:19,0:17:5.60:36,6,0	1/1:16,0:14:14.68:88,15,0	0/1:16,0:15:0:0,0,1	0/0:24,0:24:0.01:0,0,0	0/1:26,0:24:66.89:67,0,76	0/1:20,0:13:37.60:55,0,38	0/1:9,0:7:33.78:65,0,34	0/1:14,0:13:75.98:76,0,110	1/1:15,0:13:2.73:19,3,0	0/0:25,0:12:2.62:0,3,92	1/1:9,9:12:5.95:112,6,0	./.	./.	0/1:9,0:9:0:0,0,0	0/1:15,0:14:65.06:65,0,171	1/1:21,0:20:20.76:134,21,0	./.
chr10	60276592	.	CTCTCTT	C	1481.09	PASS	AB=1.000;AC=38;AF=0.760;AN=50;BaseQRankSum=0.682;DP=484;FS=21.747;HRun=0;HaplotypeScore=103.1707;InbreedingCoeff=0.1756;MQ=37.54;MQ0=86;MQRankSum=-1.212;QD=3.61;ReadPosRankSum=0.200;VQSLOD=0.1271;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:21:9.97:12,0,10	0/1:7,0:4:0:0,0,0	0/0:14,0:2:6:0,6,53	0/1:29,0:8:5.75:6,0,37	1/1:18,0:13:2.88:17,3,0	1/1:16,0:16:4.09:61,4,0	1/1:19,0:14:8.50:48,8,0	0/1:29,0:25:37.25:37,0,316	1/1:21,0:17:11.77:99,12,0	1/1:19,0:12:29.04:201,29,0	0/1:8,0:6:0:0,0,0	1/1:17,0:16:4.97:34,5,0	1/1:17,0:15:14.50:87,15,0	1/1:17,0:16:2.17:16,2,0	1/1:1,21:22:3.43:69,3,0	1/1:26,0:24:19.63:152,20,0	1/1:20,0:13:18.04:111,18,0	0/1:10,0:8:6.72:66,0,7	1/1:12,0:12:31.41:209,31,0	1/1:15,0:13:2.96:19,3,0	0/0:27,0:13:3.01:0,3,56	1/1:17,0:11:5.95:67,6,0	./.	./.	0/1:8,0:8:0:0,0,0	0/1:14,0:13:8.26:160,0,8	1/1:21,0:20:21.32:136,21,0	./.
chr10	60278149	.	ACTT	A	3017.95	PASS	AB=0.589;AC=13;AF=0.232;AN=56;BaseQRankSum=3.322;DP=765;FS=0.493;HRun=0;HaplotypeScore=101.6759;InbreedingCoeff=0.8367;MQ=46.23;MQ0=53;MQRankSum=-0.741;QD=18.40;ReadPosRankSum=2.456;VQSLOD=3.3998;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:57.20:0,57,1291	0/0:10,0:10:21.07:0,21,475	0/0:21,0:2:6.02:0,6,116	0/0:26,0:1:3.01:0,3,55	0/0:31,0:29:42.14:0,42,920	0/1:10,23:25:28.65:560,0,29	1/1:3,10:9:9.03:150,9,0	0/0:46,0:36:99:0,111,2450	0/0:16,0:16:33.11:0,33,724	0/0:33,0:29:84.26:0,84,1763	0/0:26,0:26:33.11:0,33,717	1/1:2,20:19:33.11:549,33,0	1/1:8,20:16:30.10:499,30,0	0/0:25,0:25:57.18:0,57,1248	0/0:33,0:32:66.21:0,66,1449	0/0:21,0:21:36.58:0,37,774	0/0:34,0:33:69.20:0,69,1516	0/0:49,0:44:75.26:0,75,1699	0/0:24,0:19:54.17:0,54,1171	0/0:38,0:37:66.23:0,66,1469	0/0:44,0:42:51.13:0,51,1108	1/1:2,25:22:45.07:676,45,0	1/1:1,17:17:24.04:370,24,0	1/1:6,17:15:24.08:400,24,0	0/0:22,0:20:24.08:0,24,543	0/0:30,0:28:81.28:0,81,1821	0/0:29,0:29:75.26:0,75,1697	0/0:14,0:14:27.09:0,27,612
chr10	60278300	.	GCCATCTCTTAGT	G	3746.20	PASS	AC=12;AF=0.231;AN=52;BaseQRankSum=9.239;DP=628;FS=0.000;HRun=0;HaplotypeScore=146.9643;InbreedingCoeff=0.9623;MQ=40.28;MQ0=120;MQRankSum=-7.170;QD=30.21;ReadPosRankSum=0.545;VQSLOD=2.9336;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:36:75.26:0,75,4062	0/0:9,0:7:14.97:0,15,924	./.	0/0:33,0:6:12.01:0,12,299	0/0:23,0:19:39.13:0,39,2401	1/1:13,15:12:21.07:771,21,0	1/1:6,11:12:12.04:441,12,0	0/0:36,0:28:75.22:0,75,3989	0/0:20,0:15:30.10:0,30,1768	0/0:30,0:23:69.24:0,69,3999	0/0:22,0:19:39.13:0,39,2104	1/1:3,14:6:9.03:337,9,0	1/1:9,21:13:15.05:563,15,0	0/0:24,0:15:30.10:0,30,1714	0/0:30,0:18:42.14:0,42,2505	0/0:20,0:12:24.08:0,24,1477	0/0:34,0:33:90.31:0,90,5018	0/0:26,0:25:69.19:0,69,3785	0/0:13,0:9:21.07:0,21,1129	0/0:21,0:19:51.17:0,51,2961	0/0:22,0:21:57.18:0,57,3043	./.	1/1:3,9:8:18.06:639,18,0	1/1:5,15:17:26.68:995,27,0	0/0:22,0:20:42.14:0,42,2523	0/0:17,0:13:33.11:0,33,1918	0/0:28,0:24:51.18:0,51,2911	0/0:8,0:8:18.06:0,18,826
chr10	60278993	.	CT	C	4857.24	PASS	AC=34;AF=0.630;AN=54;BaseQRankSum=0.700;DP=529;FS=2.906;HRun=3;HaplotypeScore=59.8138;InbreedingCoeff=0.8938;MQ=48.99;MQ0=40;MQRankSum=-11.437;QD=17.54;ReadPosRankSum=-1.962;VQSLOD=4.0461;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,25:22:42.13:519,42,0	1/1:0,6:2:6.02:74,6,0	0/0:15,0:8:24.08:0,24,325	0/0:30,0:16:48.14:0,48,631	1/1:1,14:9:15.05:184,15,0	0/0:16,0:16:48.09:0,48,647	0/0:27,0:27:75.25:0,75,1080	0/0:32,0:32:93.30:0,93,1304	1/1:0,18:12:30.09:371,30,0	1/1:1,10:6:18.05:212,18,0	1/1:0,8:4:9.03:111,9,0	0/0:28,0:28:84.28:0,84,1195	0/0:37,0:37:99:0,108,1554	1/1:0,23:13:33.10:407,33,0	1/1:0,30:21:60.15:724,60,0	1/1:0,16:11:30.01:336,30,0	1/1:2,19:18:36.06:426,36,0	1/1:2,14:11:24.02:297,24,0	1/1:3,5:4:3.01:37,3,0	1/1:0,3:1:3.01:37,3,0	1/1:1,20:18:33.07:391,33,0	0/0:27,0:27:81.26:0,81,1149	0/0:20,0:20:60.18:0,60,826	0/0:19,0:19:57.19:0,57,820	1/1:0,8:5:3.01:37,3,0	1/1:0,17:9:27.07:320,27,0	1/1:2,25:16:30.09:371,30,0	./.
chr10	60280957	.	A	AG	1168.77	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=6.097;DP=620;FS=116.248;HRun=2;HaplotypeScore=59.6037;InbreedingCoeff=0.9586;MQ=60.01;MQ0=11;MQRankSum=-5.850;QD=17.71;ReadPosRankSum=-2.267;VQSLOD=-0.4999;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,102,1164	0/0:8,0:8:24.08:0,24,297	0/0:35,0:32:96.29:0,96,1163	0/0:32,0:31:90.25:0,90,1085	0/0:33,0:33:71.14:0,71,903	1/1:2,15:9:27.09:364,27,0	1/1:0,7:7:18.04:230,18,0	0/0:19,0:19:45.11:0,45,532	0/0:16,0:16:45.14:0,45,557	0/0:28,0:28:78.23:0,78,944	0/0:17,0:17:36.11:0,36,445	1/1:0,5:3:9.03:129,9,0	1/1:0,9:5:12.04:173,12,0	0/0:31,0:31:90.28:0,90,1116	0/0:28,0:28:75.23:0,75,930	0/0:21,0:21:60.18:0,60,731	0/0:28,0:27:78.24:0,78,966	0/0:12,0:12:30.09:0,30,372	0/0:37,0:37:99:0,99,1225	0/0:34,0:34:65.98:0,66,781	0/0:41,0:41:99:0,111,1333	1/1:2,12:9:20.92:250,21,0	1/1:2,5:4:8.98:105,9,0	1/1:1,6:7:8.99:106,9,0	0/0:21,0:21:54.06:0,54,645	0/0:32,0:32:78.11:0,78,903	0/0:31,0:31:90.26:0,90,1101	0/0:11,0:11:33.09:0,33,396
chr10	60283110	.	A	AT	439.20	PASS	AC=12;AF=0.222;AN=54;BaseQRankSum=7.607;DP=519;FS=20.273;HRun=0;HaplotypeScore=58.9617;InbreedingCoeff=0.9010;MQ=67.45;MQ0=3;MQRankSum=-3.820;QD=7.99;ReadPosRankSum=0.873;VQSLOD=1.2732;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:18:43.47:0,43,702	0/0:10,0:10:30.10:0,30,415	0/0:19,0:18:42.57:0,43,567	0/0:14,0:12:17.86:0,18,356	0/0:26,0:26:72.21:0,72,958	1/1:2,11:5:6.02:64,6,0	./.	0/0:34,0:34:99:0,102,1392	0/0:10,0:10:30.06:0,30,397	0/0:28,0:28:84.27:0,84,1158	0/0:34,0:34:99:0,102,1381	1/1:1,11:5:15.04:165,15,0	1/1:2,13:7:14.65:148,15,0	0/0:16,0:16:48.16:0,48,670	0/0:28,0:28:84.23:0,84,1135	0/0:20,0:20:57.19:0,57,796	0/0:18,0:18:51.16:0,51,696	0/0:17,0:16:48.14:0,48,653	0/0:22,0:22:63.19:0,63,860	0/0:32,0:32:93.28:0,93,1278	0/0:10,0:10:27.09:0,27,377	1/1:0,6:6:12.03:128,12,0	1/1:0,2:1:3.01:32,3,0	1/1:1,3:3:6.02:65,6,0	0/0:27,0:27:81.24:0,81,1111	0/0:25,0:25:75.24:0,75,1034	0/0:42,0:42:99:0,126,1701	0/0:12,0:12:36.12:0,36,503
chr10	60283115	.	T	TC	441.95	PASS	AC=12;AF=0.222;AN=54;BaseQRankSum=7.022;DP=519;FS=23.263;HRun=3;HaplotypeScore=55.5413;InbreedingCoeff=0.8996;MQ=66.32;MQ0=2;MQRankSum=-4.641;QD=8.34;ReadPosRankSum=-0.632;VQSLOD=-0.4770;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:17:48.15:0,48,576	0/0:10,0:10:30.09:0,30,360	0/0:17,0:17:44.93:0,45,491	0/0:14,0:12:30.05:0,30,324	0/0:25,0:25:75.23:0,75,895	1/1:0,11:3:6.02:68,6,0	./.	0/0:35,0:35:99:0,99,1187	0/0:9,0:9:27.08:0,27,324	0/0:29,0:29:84.23:0,84,978	0/0:31,0:31:90.28:0,90,1079	1/1:2,11:6:12.03:138,12,0	1/1:1,13:5:14.99:157,15,0	0/0:16,0:16:48.15:0,48,575	0/0:27,0:27:78.23:0,78,924	0/0:22,0:22:60.16:0,60,706	0/0:20,0:20:54.15:0,54,635	0/0:18,0:17:42.09:0,42,487	0/0:22,0:22:60.16:0,60,705	0/0:31,0:31:90.28:0,90,1077	0/0:12,0:12:33.10:0,33,395	1/1:3,6:6:12.03:138,12,0	1/1:0,2:1:3.01:34,3,0	1/1:0,3:2:6.02:70,6,0	0/0:27,0:27:78.20:0,78,920	0/0:26,0:26:75.21:0,75,888	0/0:42,0:42:99:0,117,1402	0/0:12,0:12:36.11:0,36,432
chr10	60284749	.	GT	G	1561.31	PASS	AB=0.882;AC=15;AF=0.268;AN=56;BaseQRankSum=-4.648;DP=462;FS=6.505;HRun=9;HaplotypeScore=87.7628;InbreedingCoeff=0.8964;MQ=64.34;MQ0=2;MQRankSum=-2.782;QD=14.07;ReadPosRankSum=-0.015;VQSLOD=3.5370;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:51.11:0,51,574	0/0:8,0:8:24.07:0,24,277	0/1:13,2:7:18.45:18,0,56	0/0:12,0:12:17.55:0,18,225	0/0:22,0:22:42.11:0,42,475	1/1:12,1:13:27:247,27,0	1/1:0,6:5:15.01:137,15,0	0/0:8,0:16:40.24:0,40,234	0/0:12,0:12:21.06:0,21,242	0/0:21,0:21:51.15:0,51,588	0/0:16,0:15:30.09:0,30,346	1/1:9,10:18:39.02:357,39,0	1/1:4,8:11:26.99:241,27,0	0/0:13,0:13:18.04:0,18,198	0/0:9,0:10:23.90:0,24,257	0/0:18,0:18:42.10:0,42,465	0/0:17,0:17:39.10:0,39,440	0/0:12,0:12:30.05:0,30,331	0/0:23,0:22:49.01:0,49,539	0/0:18,0:18:51.12:0,51,575	0/0:14,0:14:24.07:0,24,277	1/1:8,7:15:33.01:302,33,0	1/1:13,6:18:38.98:347,39,0	1/1:8,4:11:11.99:110,12,0	0/0:29,0:29:66.18:0,66,752	0/0:23,0:23:51.15:0,51,589	0/0:24,0:23:51.06:0,51,557	0/0:14,0:14:42.09:0,42,471
chr10	60284763	.	C	CTT	9794.09	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-3.938;DP=417;FS=11.921;HRun=9;HaplotypeScore=62.3814;InbreedingCoeff=0.8395;MQ=61.34;MQ0=6;MQRankSum=-1.768;QD=25.05;ReadPosRankSum=2.499;VQSLOD=3.0423;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,19:20:54.18:831,54,0	1/1:2,6:8:18.02:251,18,0	0/0:14,0:5:10.01:0,10,65	0/0:11,0:10:16.10:0,16,135	1/1:3,14:17:33.11:487,33,0	1/1:9,0:11:24.95:86,25,0	1/1:3,0:7:7.49:26,7,0	1/1:14,1:12:11.48:84,11,0	1/1:3,10:11:21.07:323,21,0	1/1:1,16:17:45.11:606,45,0	1/1:3,13:14:33.11:508,33,0	1/1:8,0:15:29.39:100,29,0	1/1:5,0:10:17.94:61,18,0	1/1:3,9:11:23.57:332,24,0	1/1:3,5:8:15.05:231,15,0	1/1:2,11:14:29.59:424,30,0	1/1:0,13:16:44.08:591,44,0	1/1:3,10:12:16.09:402,16,0	1/1:5,10:15:33.11:500,33,0	1/1:3,12:18:38.61:545,39,0	1/1:2,7:9:15.05:231,15,0	1/1:10,0:13:14.57:49,15,0	1/1:10,0:13:24.95:85,25,0	1/1:8,0:10:7.49:26,7,0	1/1:4,19:24:50.66:747,51,0	1/1:3,20:22:63.20:948,63,0	1/1:4,18:22:45.15:675,45,0	1/1:0,14:14:42.14:646,42,0
chr10	60287414	.	CT	C	12474.41	PASS	AB=1.000;AC=41;AF=0.732;AN=56;BaseQRankSum=6.492;DP=584;FS=72.079;HRun=5;HaplotypeScore=46.8713;InbreedingCoeff=0.8981;MQ=54.48;MQ0=55;MQRankSum=4.142;QD=27.18;ReadPosRankSum=4.463;VQSLOD=-0.0249;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,19:23:48.13:544,48,0	1/1:0,8:8:15.04:170,15,0	0/0:30,0:2:6.02:0,6,75	0/1:28,0:1:0:0,0,0	1/1:3,24:26:57.16:645,57,0	0/0:15,0:12:30.10:0,30,410	0/0:10,0:10:21.07:0,21,287	0/0:30,0:25:75.21:0,75,967	1/1:1,24:25:60.17:681,60,0	1/1:1,32:32:93.26:1054,93,0	1/1:0,21:21:51.14:578,51,0	1/1:0,27:27:72.21:817,72,0	1/1:0,23:23:60.17:681,60,0	1/1:0,16:16:42.12:476,42,0	1/1:0,20:20:57.16:647,57,0	1/1:1,18:19:51.15:579,51,0	1/1:0,12:12:33.09:374,33,0	1/1:0,6:5:9.03:102,9,0	1/1:1,25:22:66.16:736,66,0	1/1:2,22:24:54.15:612,54,0	1/1:1,24:25:69.20:783,69,0	0/0:16,0:8:3.01:0,3,41	0/0:16,0:10:18.05:0,18,229	0/0:8,0:5:12:0,12,143	1/1:1,22:23:57.16:647,57,0	1/1:2,29:31:87.25:987,87,0	1/1:0,29:29:87.25:987,87,0	1/1:2,11:13:33.09:374,33,0
chr10	60287670	.	G	GT	8666.27	PASS	AC=40;AF=0.741;AN=54;BaseQRankSum=-6.692;DP=385;FS=10.874;HRun=8;HaplotypeScore=30.9792;InbreedingCoeff=0.8635;MQ=53.90;MQ0=32;MQRankSum=5.692;QD=26.67;ReadPosRankSum=3.050;VQSLOD=4.4473;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,5:6:15.04:173,15,0	1/1:3,7:10:18.05:208,18,0	0/0:14,0:7:8.98:0,9,82	0/0:6,0:3:2.67:0,3,11	1/1:5,25:29:62.99:665,63,0	./.	0/0:2,0:1:3:0,3,27	0/0:11,0:7:14.97:0,15,130	1/1:1,12:13:32.61:380,33,0	1/1:4,24:26:69.21:796,69,0	1/1:1,18:21:44.97:499,45,0	1/1:4,14:18:45.13:518,45,0	1/1:1,13:15:42.12:483,42,0	1/1:0,9:9:21.06:242,21,0	1/1:1,12:13:36.11:415,36,0	1/1:1,21:22:60.18:692,60,0	1/1:0,11:11:27.05:298,27,0	1/1:4,5:8:15.04:173,15,0	1/1:5,13:16:33.10:381,33,0	1/1:2,24:26:63.17:715,63,0	1/1:1,3:4:9.03:104,9,0	0/0:9,0:3:9:0,9,82	0/0:9,0:3:8.96:0,9,74	0/0:5,0:4:9:0,9,82	1/1:3,19:21:48.14:554,48,0	1/1:2,18:16:48.09:538,48,0	1/1:0,16:16:39.12:450,39,0	1/1:2,12:13:33.10:380,33,0
chr10	60287864	.	CCAGATTATGCCTCTGTAGTT	C	887.59	PASS	AC=10;AF=0.185;AN=54;BaseQRankSum=4.523;DP=456;FS=1.467;HRun=0;HaplotypeScore=198.6377;InbreedingCoeff=0.7965;MQ=57.98;MQ0=23;MQRankSum=-4.124;QD=35.50;ReadPosRankSum=-1.077;VQSLOD=2.1319;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:57.18:0,57,4499	0/0:8,0:8:24.08:0,24,2081	0/0:22,0:13:17.98:0,18,622	0/0:27,0:9:18.95:0,19,588	0/0:23,0:23:57.20:0,57,5089	1/1:3,2:3:6.02:333,6,0	1/1:3,3:3:3.01:125,3,0	1/1:6,2:7:3.01:166,3,0	0/0:23,0:23:48.16:0,48,4575	0/0:25,0:25:60.21:0,60,4966	0/0:23,0:23:57.20:0,57,4979	0/0:19,0:19:51.18:0,51,3922	0/0:11,0:11:23.60:0,24,2094	0/0:17,0:15:33.11:0,33,2633	0/0:17,0:16:36.12:0,36,3338	0/0:21,0:21:51.18:0,51,4375	0/0:14,0:14:21.07:0,21,1539	0/0:12,0:8:15.05:0,15,1207	0/0:20,0:19:51.18:0,51,4110	0/0:23,0:22:66.23:0,66,5348	0/0:24,0:24:66.21:0,66,5518	1/1:1,1:1:3.01:140,3,0	1/1:1,3:4:6.02:258,6,0	./.	0/0:20,0:20:54.19:0,54,4661	0/0:21,0:21:60.21:0,60,5590	0/0:27,0:24:51.18:0,51,4337	0/0:12,0:11:21.06:0,21,1659
chr10	60288912	.	G	GA	3678.36	PASS	AC=12;AF=0.231;AN=52;BaseQRankSum=-9.486;DP=596;FS=18.468;HRun=4;HaplotypeScore=47.3588;InbreedingCoeff=0.9962;MQ=52.71;MQ0=40;MQRankSum=1.019;QD=30.91;ReadPosRankSum=-2.637;VQSLOD=1.2374;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:60.15:0,60,671	0/0:6,0:6:15.04:0,15,170	./.	./.	0/0:27,0:27:72:0,72,805	1/1:3,35:38:87.25:1168,87,0	1/1:1,11:12:27.09:369,27,0	1/1:4,18:18:42.07:520,42,0	0/0:18,0:18:51.15:0,51,578	0/0:26,0:26:66.18:0,66,748	0/0:18,0:18:51.15:0,51,578	0/0:18,0:18:48.14:0,48,544	0/0:31,0:31:87.23:0,87,975	0/0:18,0:18:48.12:0,48,535	0/0:17,0:17:51.15:0,51,578	0/0:21,0:21:57.16:0,57,647	0/0:20,0:20:60.17:0,60,680	0/0:15,0:14:36.08:0,36,397	0/0:25,0:23:63.13:0,63,691	0/0:21,0:21:60.17:0,60,680	0/0:22,0:22:57.16:0,57,646	1/1:2,14:16:39.10:513,39,0	1/1:1,10:10:27.09:369,27,0	1/1:1,19:20:54.18:739,54,0	0/0:29,0:29:81.20:0,81,906	0/0:19,0:19:54.15:0,54,612	0/0:32,0:31:90.24:0,90,1010	0/0:14,0:14:39.11:0,39,442
chr10	60289615	.	AAAAT	A	8803.02	PASS	AB=0.675;AC=36;AF=0.643;AN=56;BaseQRankSum=3.325;DP=416;FS=10.890;HRun=0;HaplotypeScore=93.4613;InbreedingCoeff=0.6949;MQ=34.57;MQ0=18;MQRankSum=-6.441;QD=27.68;ReadPosRankSum=2.117;VQSLOD=4.2491;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,14:14:9.03:155,9,0	1/1:3,5:7:15.05:258,15,0	0/0:11,0:1:3.01:0,3,73	0/0:9,0:1:0:0,0,0	1/1:4,16:18:29.89:359,30,0	0/0:19,0:9:21.07:0,21,490	0/0:5,0:3:9.03:0,9,210	0/0:19,0:12:27.09:0,27,665	0/1:4,12:14:19.96:527,0,20	1/1:5,16:17:42.14:721,42,0	1/1:8,10:17:36.04:556,36,0	1/1:2,10:11:24.08:413,24,0	1/1:7,12:18:33.07:537,33,0	1/1:4,15:18:42.02:628,42,0	1/1:3,13:14:39.13:672,39,0	1/1:5,8:13:21.07:359,21,0	1/1:9,12:14:16.30:307,16,0	0/1:10,4:10:39.48:168,0,39	1/1:4,7:10:24.08:413,24,0	1/1:7,7:12:18.02:278,18,0	0/0:5,2:6:0:0,0,0	0/0:8,0:7:9.03:0,9,181	0/0:10,0:9:18.06:0,18,434	0/0:10,0:5:12.04:0,12,257	1/1:4,10:13:30.02:453,30,0	1/1:8,21:25:60.20:1021,60,0	1/1:3,22:25:60.03:906,60,0	1/1:3,5:4:5.98:72,6,0
chr10	60289635	.	TA	T	7485.51	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=2.822;DP=414;FS=2.782;HRun=7;HaplotypeScore=90.8303;InbreedingCoeff=0.9277;MQ=42.14;MQ0=4;MQRankSum=-3.946;QD=21.95;ReadPosRankSum=0.481;VQSLOD=4.5782;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,19:15:36:343,36,0	1/1:0,7:6:18.04:182,18,0	0/0:7,0:5:15.05:0,15,182	0/0:4,0:2:6.01:0,6,63	1/1:5,15:18:33.02:325,33,0	0/0:14,0:7:21.07:0,21,257	0/0:6,0:6:15.05:0,15,189	0/0:24,0:18:51.16:0,51,642	1/1:1,14:13:36.07:365,36,0	1/1:2,30:26:75.14:753,75,0	1/1:3,17:18:42.09:424,42,0	1/1:1,12:12:33.07:333,33,0	1/1:1,19:19:54.11:548,54,0	1/1:0,17:16:48.10:484,48,0	1/1:2,15:15:36.07:363,36,0	1/1:0,11:11:30.06:303,30,0	1/1:3,19:16:36.08:366,36,0	1/1:7,8:11:12.02:122,12,0	1/1:3,9:12:27.05:275,27,0	1/1:1,14:13:30.06:303,30,0	1/1:2,4:5:8.35:89,8,0	0/0:5,0:4:12.04:0,12,151	0/0:7,0:7:15.01:0,15,172	0/0:6,0:4:12.04:0,12,151	1/1:1,15:15:42.09:425,42,0	1/1:2,27:25:69.11:692,69,0	1/1:4,24:28:72.14:729,72,0	1/1:3,2:2:6.01:61,6,0
chr10	60290049	.	ACTAGCTT	A	1592.80	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=6.500;DP=575;FS=58.835;HRun=0;HaplotypeScore=124.6150;InbreedingCoeff=0.8478;MQ=51.39;MQ0=60;MQRankSum=-7.410;QD=30.63;ReadPosRankSum=-1.596;VQSLOD=0.9645;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:38:42.14:0,42,1371	0/0:7,0:7:15.05:0,15,484	0/0:24,0:1:3.01:0,3,38	0/0:31,0:6:12.02:0,12,245	0/0:26,0:26:45.15:0,45,1335	1/1:0,6:6:15.05:360,15,0	1/1:0,10:10:21.07:563,21,0	1/1:6,9:9:24.08:644,24,0	0/0:29,0:27:45.15:0,45,1500	0/0:20,0:19:57.16:0,57,1717	0/0:23,0:23:54.14:0,54,1616	0/0:21,0:21:44.80:0,45,1411	0/0:28,0:27:53.76:0,54,1710	0/0:18,0:17:26.92:0,27,888	0/0:30,0:29:48.16:0,48,1625	0/0:26,0:25:38.49:0,38,1264	0/0:37,0:34:51.18:0,51,1670	0/0:28,0:18:24.08:0,24,816	0/0:24,0:19:57.20:0,57,1846	0/0:22,0:20:51.18:0,51,1556	0/0:36,0:35:48.16:0,48,1517	1/1:0,2:1:3.01:37,3,0	1/1:0,8:2:3.01:37,3,0	1/1:0,11:11:6.02:118,6,0	0/0:13,0:13:33.08:0,33,1090	0/0:17,0:17:48.16:0,48,1592	0/0:16,0:15:30.57:0,31,987	0/0:5,0:5:12.04:0,12,407
chr10	60290287	.	C	CG	1412.75	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=10.207;DP=565;FS=2.522;HRun=1;HaplotypeScore=61.9093;InbreedingCoeff=0.9699;MQ=71.45;MQ0=4;MQRankSum=-5.285;QD=16.62;ReadPosRankSum=-0.931;VQSLOD=3.4889;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:54.15:0,54,673	0/0:4,0:4:12.04:0,12,156	0/0:16,0:16:42.11:0,42,502	0/0:20,0:20:44.78:0,45,520	0/0:33,0:33:84.22:0,84,1054	1/1:1,31:21:60.05:626,60,0	1/1:3,5:6:10.17:72,10,0	1/1:7,14:10:29.97:273,30,0	0/0:21,0:21:57.18:0,57,738	0/0:35,0:35:99:0,99,1263	0/0:29,0:29:81.24:0,81,1022	0/0:14,0:14:36.07:0,36,435	0/0:25,0:25:75.23:0,75,958	0/0:29,0:29:81.22:0,81,1007	0/0:29,0:29:87.27:0,87,1115	0/0:18,0:18:51.17:0,51,662	0/0:16,0:16:39.11:0,39,491	0/0:11,0:11:33.11:0,33,428	0/0:20,0:20:51.15:0,51,636	0/0:34,0:34:99:0,102,1305	0/0:21,0:21:60.18:0,60,752	1/1:1,3:3:9.02:99,9,0	1/1:1,8:8:24.03:250,24,0	1/1:3,8:10:27.04:275,27,0	0/0:27,0:27:75.22:0,75,944	0/0:20,0:20:57.19:0,57,739	0/0:33,0:32:96.29:0,96,1220	0/0:6,0:6:18.06:0,18,233
chr10	60290290	.	A	AAC	1749.14	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=10.988;DP=570;FS=5.408;HRun=0;HaplotypeScore=70.7868;InbreedingCoeff=0.9375;MQ=69.53;MQ0=5;MQRankSum=-4.570;QD=19.65;ReadPosRankSum=-0.221;VQSLOD=3.3514;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:60.17:0,60,855	0/0:4,0:4:12.04:0,12,184	0/0:18,0:18:51.09:0,51,697	0/0:19,0:18:45.15:0,45,656	0/0:32,0:32:81.28:0,81,1239	1/1:3,31:21:57.19:857,57,0	1/1:3,5:5:8.28:65,8,0	1/1:8,14:8:23.64:277,24,0	0/0:22,0:22:66.20:0,66,966	0/0:34,0:34:93.32:0,93,1424	0/0:29,0:29:78.26:0,78,1187	0/0:16,0:16:45.14:0,45,668	0/0:27,0:27:81.26:0,81,1199	0/0:27,0:27:78.26:0,78,1193	0/0:29,0:29:84.29:0,84,1285	0/0:19,0:19:57.19:0,57,853	0/0:12,0:12:36.12:0,36,551	0/0:11,0:11:33.11:0,33,505	0/0:21,0:21:60.19:0,60,895	0/0:33,0:33:99:0,99,1509	0/0:19,0:19:54.18:0,54,825	1/1:0,3:3:9.03:138,9,0	1/1:2,8:8:4.84:302,5,0	1/1:4,8:10:21.17:285,21,0	0/0:27,0:27:75.24:0,75,1109	0/0:23,0:23:63.21:0,63,945	0/0:32,0:31:96.33:0,96,1470	0/0:6,0:6:18.06:0,18,276
chr10	60291339	.	AATCT	A	4956.11	PASS	AB=0.791;AC=33;AF=0.717;AN=46;BaseQRankSum=6.341;DP=458;FS=2.408;HRun=0;HaplotypeScore=80.8758;InbreedingCoeff=0.5305;MQ=61.27;MQ0=8;MQRankSum=-0.461;QD=15.39;ReadPosRankSum=0.496;VQSLOD=4.1769;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:16,2:17:5.93:92,6,0	1/1:5,5:10:12.04:184,12,0	./.	./.	0/0:29,0:29:45.15:0,45,997	0/1:13,0:22:3.48:47,0,3	./.	0/0:34,0:32:3.39:0,3,19	1/1:6,3:9:3.01:46,3,0	1/1:10,12:21:33.11:499,33,0	0/0:21,0:21:39.13:0,39,908	1/1:9,1:10:3.48:47,3,0	0/1:12,4:16:44.19:252,0,44	1/1:4,6:10:18.06:276,18,0	0/0:9,0:9:24.08:0,24,560	1/1:7,7:14:21.07:322,21,0	1/1:13,11:21:23.73:367,24,0	0/1:16,0:17:16.14:37,0,16	1/1:8,4:12:12.04:177,12,0	1/1:10,17:26:47.33:659,47,0	1/1:11,12:23:27.09:414,27,0	./.	./.	0/0:9,0:8:2.71:0,3,21	1/1:14,16:30:27.09:414,27,0	1/1:11,4:19:29.86:362,30,0	1/1:8,17:25:39.13:579,39,0	1/1:6,5:10:12.04:184,12,0
chr10	60291612	.	GGTGGACTTTTTCCAA	G	3879.58	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=11.099;DP=585;FS=3.529;HRun=0;HaplotypeScore=205.9309;InbreedingCoeff=0.9471;MQ=54.22;MQ0=28;MQRankSum=-7.626;QD=44.59;ReadPosRankSum=-3.563;VQSLOD=2.6463;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:18:48.16:0,48,2774	0/0:10,0:10:30.10:0,30,2242	0/0:21,0:3:9.03:0,9,453	0/0:23,0:9:27.09:0,27,1790	0/0:34,0:34:99:0,102,6966	1/1:28,0:16:39:1010,39,0	1/1:11,0:8:15:328,15,0	1/1:13,9:10:27.07:724,27,0	0/0:17,0:16:48.16:0,48,3483	0/0:30,0:30:90.31:0,90,6130	0/0:27,0:26:69.24:0,69,4912	0/0:17,0:17:51.18:0,51,3555	0/0:25,0:23:66.23:0,66,4545	0/0:21,0:21:60.18:0,60,3947	0/0:26,0:26:78.24:0,78,5257	0/0:27,0:27:81.26:0,81,5632	0/0:15,0:12:33.07:0,33,2223	0/0:17,0:14:42.10:0,42,2769	0/0:22,0:17:51.17:0,51,3452	0/0:38,0:38:99:0,114,8048	0/0:19,0:19:54.19:0,54,3156	1/1:9,0:9:26.95:740,27,0	1/1:13,0:13:29.99:944,30,0	1/1:4,0:2:3.01:135,3,0	0/0:29,0:29:81.28:0,81,5650	0/0:19,0:19:57.20:0,57,3759	0/0:32,0:32:87.30:0,87,6039	0/0:8,0:7:21.07:0,21,1453
chr10	60291614	.	TGGACTTTTTCC	T	2245.55	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=10.849;DP=560;FS=3.721;HRun=0;HaplotypeScore=163.7729;InbreedingCoeff=0.9488;MQ=54.96;MQ0=24;MQRankSum=-7.572;QD=32.54;ReadPosRankSum=-3.132;VQSLOD=2.9877;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:18:48.16:0,48,2369	0/0:10,0:10:30.10:0,30,1780	0/0:21,0:4:12.04:0,12,572	0/0:23,0:10:30.10:0,30,1636	0/0:35,0:35:99:0,105,5883	1/1:5,17:13:38.36:683,38,0	1/1:1,6:5:15.04:221,15,0	1/1:18,0:9:14.17:317,14,0	0/0:17,0:16:48.16:0,48,2837	0/0:30,0:30:90.31:0,90,5154	0/0:23,0:23:69.24:0,69,3980	0/0:17,0:17:51.18:0,51,3026	0/0:25,0:23:66.23:0,66,3733	0/0:20,0:20:60.18:0,60,3346	0/0:27,0:27:81.25:0,81,4433	0/0:28,0:28:84.27:0,84,4722	0/0:14,0:11:33.07:0,33,1799	0/0:17,0:14:42.10:0,42,2214	0/0:21,0:17:51.17:0,51,2875	0/0:39,0:39:99:0,117,6703	0/0:19,0:19:54.19:0,54,2832	1/1:1,8:9:26.93:483,27,0	1/1:1,9:10:30.01:628,30,0	1/1:1,2:1:3.01:91,3,0	0/0:28,0:28:81.28:0,81,4642	0/0:19,0:19:57.20:0,57,3090	0/0:29,0:29:87.30:0,87,4956	0/0:8,0:7:21.07:0,21,1214
chr10	60291627	.	AGTAC	A	526.29	PASS	AB=0.515;AC=7;AF=0.125;AN=56;BaseQRankSum=7.588;DP=556;FS=0.861;HRun=0;HaplotypeScore=99.4597;InbreedingCoeff=0.5287;MQ=63.55;MQ0=8;MQRankSum=-7.209;QD=10.74;ReadPosRankSum=2.268;VQSLOD=2.6055;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:13:36.10:0,36,939	0/0:10,0:10:30.10:0,30,831	0/0:32,0:17:51.18:0,51,1442	0/0:25,0:15:45.15:0,45,1240	0/0:33,0:33:99:0,99,2861	0/1:1,17:8:1.43:199,0,1	0/1:0,6:4:20.96:34,0,21	0/0:18,0:14:22.73:0,23,581	0/0:17,0:17:51.18:0,51,1477	0/0:25,0:25:72.25:0,72,2088	0/0:24,0:24:72.25:0,72,2005	0/0:21,0:21:57.19:0,57,1611	0/0:24,0:22:63.22:0,63,1817	0/0:21,0:21:57.18:0,57,1549	0/0:24,0:24:72.25:0,72,2059	0/0:28,0:28:84.29:0,84,2359	0/0:18,0:16:48.16:0,48,1349	0/0:17,0:14:42.14:0,42,1215	0/0:21,0:21:63.22:0,63,1730	0/0:38,0:38:99:0,114,3182	0/0:15,0:15:42.13:0,42,1154	0/1:1,8:9:13.93:154,0,14	1/1:2,9:11:14.07:227,14,0	1/1:3,2:3:3.01:42,3,0	0/0:24,0:24:69.24:0,69,1962	0/0:19,0:19:57.20:0,57,1633	0/0:32,0:32:96.31:0,96,2672	0/0:6,0:6:18.06:0,18,496
chr10	60292894	.	G	GCC	187.17	PASS	AC=8;AF=0.154;AN=52;BaseQRankSum=4.485;DP=594;FS=1.528;HRun=0;HaplotypeScore=69.6621;InbreedingCoeff=0.7379;MQ=41.52;MQ0=123;MQRankSum=-3.584;QD=5.67;ReadPosRankSum=-0.360;VQSLOD=2.8263;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:36:75.26:0,75,1211	0/0:13,0:8:21.07:0,21,328	0/0:28,0:2:3.01:0,3,49	0/0:27,0:1:3.01:0,3,41	0/0:22,0:10:15.52:0,16,239	./.	1/1:2,10:3:3.01:44,3,0	./.	0/0:19,0:17:36.11:0,36,562	0/0:21,0:15:45.15:0,45,733	0/0:20,0:10:15.05:0,15,245	0/0:24,0:23:48.15:0,48,757	0/0:34,0:31:78.27:0,78,1256	0/0:36,0:34:90.31:0,90,1463	0/0:34,0:32:78.27:0,78,1270	0/0:27,0:23:54.18:0,54,877	0/0:32,0:27:60.20:0,60,975	0/0:12,0:12:27.09:0,27,440	0/0:16,0:9:27.09:0,27,439	0/0:15,0:10:24.08:0,24,391	0/0:52,0:43:99:0,99,1574	1/1:5,4:3:9.03:135,9,0	1/1:1,3:2:2.84:45,3,0	1/1:1,7:4:6:88,6,0	0/0:20,0:14:36.12:0,36,587	0/0:31,0:22:66.23:0,66,1077	0/0:22,0:19:42.14:0,42,684	0/0:10,0:9:27.09:0,27,440
chr10	60292896	.	T	TTCACC	618.93	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=4.418;DP=618;FS=1.190;HRun=0;HaplotypeScore=88.5408;InbreedingCoeff=0.7584;MQ=40.25;MQ0=121;MQRankSum=-3.318;QD=10.32;ReadPosRankSum=-2.313;VQSLOD=1.6482;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:38:75.24:0,75,1622	0/0:13,0:8:21.07:0,21,468	0/0:27,0:1:3.01:0,3,62	0/0:28,0:2:3.01:0,3,30	0/0:22,0:10:14.76:0,15,334	1/1:4,1:3:2.98:21,3,0	1/1:9,10:5:9.03:234,9,0	1/1:10,2:4:3:27,3,0	0/0:19,0:17:39.13:0,39,852	0/0:21,0:16:45.15:0,45,1004	0/0:19,0:9:15.05:0,15,335	0/0:23,0:22:48.16:0,48,1069	0/0:34,0:31:78.23:0,78,1660	0/0:36,0:34:90.31:0,90,1991	0/0:33,0:31:87.17:0,87,1759	0/0:27,0:23:60.12:0,60,1228	0/0:30,0:26:60.17:0,60,1292	0/0:12,0:12:27.09:0,27,602	0/0:17,0:10:30.07:0,30,615	0/0:16,0:11:27.05:0,27,541	0/0:51,0:43:99:0,99,2113	1/1:5,4:3:9.03:243,9,0	1/1:0,3:1:3.01:81,3,0	1/1:5,7:7:5.69:163,6,0	0/0:21,0:15:36.12:0,36,789	0/0:33,0:25:69.22:0,69,1496	0/0:22,0:19:42.11:0,42,890	0/0:10,0:9:27.09:0,27,602
chr10	60293582	.	T	TGTCG	3735.03	PASS	AC=10;AF=0.185;AN=54;BaseQRankSum=-4.393;DP=554;FS=7.452;HRun=0;HaplotypeScore=105.3717;InbreedingCoeff=0.9953;MQ=49.60;MQ0=14;MQRankSum=0.975;QD=42.44;ReadPosRankSum=1.055;VQSLOD=4.0922;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:30:75.05:0,75,1174	0/0:7,0:7:21.06:0,21,366	0/0:16,0:10:20.23:0,20,385	0/0:21,0:12:30.06:0,30,482	0/0:33,0:32:90.24:0,90,1524	1/1:2,18:19:41.97:998,42,0	./.	1/1:1,9:10:23.86:188,24,0	0/0:19,0:18:48.11:0,48,814	0/0:30,0:30:87.20:0,87,1393	0/0:30,0:29:84.18:0,84,1376	0/0:9,0:9:24.07:0,24,399	0/0:18,0:18:39.11:0,39,653	0/0:16,0:16:39.09:0,39,615	0/0:17,0:16:30.10:0,30,542	0/0:22,0:22:51.12:0,51,899	0/0:21,0:19:54.14:0,54,952	0/0:10,0:10:30.05:0,30,478	0/0:19,0:18:54.14:0,54,857	0/0:38,0:38:99:0,102,1807	0/0:17,0:17:45.14:0,45,802	1/1:1,13:13:27.09:673,27,0	1/1:2,24:25:54.08:1340,54,0	1/1:1,9:9:21.07:536,21,0	0/0:19,0:18:48.10:0,48,782	0/0:25,0:25:69.16:0,69,1120	0/0:22,0:21:54.13:0,54,909	0/0:16,0:16:48.11:0,48,810
chr10	60294095	.	AT	A	11588.09	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-0.784;DP=507;FS=4.521;HRun=7;HaplotypeScore=51.6044;InbreedingCoeff=0.8687;MQ=53.41;MQ0=4;MQRankSum=1.586;QD=23.55;ReadPosRankSum=3.590;VQSLOD=4.9712;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,16:17:39.08:397,39,0	1/1:0,7:7:15.03:153,15,0	0/0:10,0:7:18.05:0,18,217	0/0:5,0:5:6.24:0,6,121	1/1:3,27:30:66.14:673,66,0	1/1:0,13:13:39.09:398,39,0	1/1:3,11:13:18.04:184,18,0	1/1:4,30:31:81.14:807,81,0	1/1:2,11:13:24.05:245,24,0	1/1:7,18:25:57.12:581,57,0	1/1:4,24:28:45.09:459,45,0	1/1:2,11:13:33.07:335,33,0	1/1:1,19:20:54.12:551,54,0	1/1:0,22:22:57.13:581,57,0	1/1:1,23:24:63.14:643,63,0	1/1:1,19:20:45.10:459,45,0	1/1:1,14:15:42.10:428,42,0	1/1:4,8:11:15.03:153,15,0	1/1:0,14:13:39.03:380,39,0	1/1:2,20:22:54.12:551,54,0	1/1:4,17:21:48.10:490,48,0	1/1:1,10:11:21.05:214,21,0	1/1:1,19:18:39.08:398,39,0	1/1:1,5:6:6.01:61,6,0	1/1:0,20:20:60.14:612,60,0	1/1:3,21:24:63.14:642,63,0	1/1:1,34:34:81.18:826,81,0	1/1:0,12:12:36.08:367,36,0
chr10	60294673	.	AT	A	669.37	PASS	AC=2;AF=0.038;AN=52;BaseQRankSum=2.036;DP=495;FS=14.576;HRun=2;HaplotypeScore=42.1785;InbreedingCoeff=0.6673;MQ=40.14;MQ0=65;MQRankSum=-3.361;QD=20.92;ReadPosRankSum=-2.599;VQSLOD=1.6242;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:17:15.05:0,15,224	0/0:7,0:7:12.04:0,12,179	./.	./.	0/0:19,0:19:33.09:0,33,455	0/0:16,0:16:30.10:0,30,449	0/0:14,0:8:21.07:0,21,306	1/1:4,28:23:63.11:763,63,0	0/0:13,0:12:27.09:0,27,403	0/0:32,0:29:84.28:0,84,1239	0/0:28,0:28:60.19:0,60,859	0/0:8,0:8:15.05:0,15,224	0/0:24,0:22:35.77:0,36,510	0/0:18,0:16:30.09:0,30,431	0/0:16,0:14:24.08:0,24,359	0/0:12,0:12:21:0,21,313	0/0:14,0:8:3.01:0,3,45	0/0:11,0:6:9.03:0,9,135	0/0:19,0:15:45.12:0,45,625	0/0:27,0:27:75.23:0,75,1080	0/0:11,0:6:9.01:0,9,114	0/0:8,0:8:9.03:0,9,135	0/0:11,0:11:18.06:0,18,268	0/0:8,0:7:12.02:0,12,158	0/0:22,0:21:54.17:0,54,788	0/0:24,0:24:72.20:0,72,1016	0/0:41,0:35:72.21:0,72,1032	0/0:12,0:9:15.04:0,15,205
chr10	60296305	.	TATGAAC	T	231.97	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.581;DP=499;FS=9.216;HRun=0;HaplotypeScore=101.8664;InbreedingCoeff=0.8928;MQ=62.30;MQ0=0;MQRankSum=-3.676;QD=13.65;ReadPosRankSum=-3.178;VQSLOD=1.2733;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:13:42.14:0,42,1390	0/0:10,0:10:30.10:0,30,1080	0/0:13,0:10:30.10:0,30,985	0/0:14,0:10:27.03:0,27,659	0/0:30,0:30:90.31:0,90,3217	0/0:17,0:16:48.08:0,48,1532	0/0:10,0:10:24.08:0,24,865	1/1:0,17:6:18.04:322,18,0	0/0:16,0:16:48.16:0,48,1704	0/0:22,0:22:63.22:0,63,2226	0/0:15,0:15:45.09:0,45,1520	0/0:19,0:19:57.20:0,57,2051	0/0:22,0:22:66.23:0,66,2376	0/0:17,0:17:51.18:0,51,1790	0/0:17,0:17:51.18:0,51,1816	0/0:11,0:11:33.11:0,33,1121	0/0:14,0:14:36.12:0,36,1296	0/0:19,0:17:48.16:0,48,1546	0/0:21,0:19:57.19:0,57,1907	0/0:33,0:33:96.32:0,96,3362	0/0:16,0:16:48.16:0,48,1709	0/0:18,0:18:51.16:0,51,1698	0/0:23,0:23:69.24:0,69,2437	0/0:9,0:9:27.09:0,27,902	0/0:19,0:19:57.20:0,57,1941	0/0:29,0:29:84.29:0,84,2916	0/0:29,0:29:84.27:0,84,2935	0/0:4,0:4:6.02:0,6,216
chr10	60297459	.	TA	T	18423.61	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-5.551;DP=783;FS=5.651;HRun=1;HaplotypeScore=118.7755;InbreedingCoeff=0.9985;MQ=65.07;MQ0=14;MQRankSum=5.870;QD=34.44;ReadPosRankSum=6.027;VQSLOD=4.1618;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,29:26:48.12:649,48,0	1/1:0,10:10:18.06:252,18,0	0/0:46,0:43:99:0,102,1645	0/0:41,0:38:65.76:0,66,1289	1/1:0,36:35:99:1383,102,0	0/0:31,0:28:54.17:0,54,838	0/0:16,0:16:45.15:0,45,716	0/0:36,0:36:99:0,105,1678	1/1:0,22:22:54.18:755,54,0	1/1:1,37:37:99:1446,105,0	1/1:0,33:33:93.27:1279,93,0	1/1:0,27:27:78.19:1049,78,0	1/1:4,28:29:69.13:902,69,0	1/1:3,26:24:57.12:755,57,0	1/1:1,32:32:81.09:1027,81,0	1/1:1,17:16:39.05:502,39,0	1/1:0,21:19:45.07:586,45,0	1/1:0,12:12:36.12:503,36,0	1/1:0,27:26:78.26:1084,78,0	1/1:0,35:35:96.23:1298,96,0	1/1:0,19:19:54.18:755,54,0	0/0:21,0:21:54.16:0,54,817	0/0:37,0:37:99:0,102,1627	0/0:20,0:20:45.15:0,45,718	1/1:0,27:27:72.24:1007,72,0	1/1:1,38:39:94.41:1494,94,0	1/1:2,35:36:96.13:1279,96,0	1/1:0,10:10:30.10:419,30,0
chr10	60297518	.	TGAGAGACAGAAAG	T	157.12	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=0.434;DP=731;FS=2.915;HRun=0;HaplotypeScore=198.4005;InbreedingCoeff=0.7046;MQ=53.75;MQ0=85;MQRankSum=-2.134;QD=5.07;ReadPosRankSum=-1.041;VQSLOD=2.7584;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:24:40.02:0,40,2019	0/0:11,0:11:30.10:0,30,1548	0/0:40,0:7:8.15:0,8,137	0/0:41,0:10:8.70:0,9,131	0/0:35,0:33:84.29:0,84,4843	0/0:30,0:19:30.10:0,30,1128	0/0:16,0:10:18.06:0,18,805	1/1:14,17:11:6.02:237,6,0	0/0:24,0:21:45.14:0,45,2122	0/0:36,0:34:96.33:0,96,5764	0/0:25,0:23:57.18:0,57,2942	0/0:27,0:24:57.19:0,57,2778	0/0:31,0:27:48.62:0,49,2213	0/0:25,0:20:36.12:0,36,1846	0/0:37,0:37:75.26:0,75,4262	0/0:19,0:17:27.56:0,28,1348	0/0:14,0:10:18.03:0,18,842	0/0:12,0:8:15.05:0,15,624	0/0:23,0:19:48.16:0,48,2877	0/0:34,0:32:96.32:0,96,4798	0/0:25,0:15:29.77:0,30,1804	0/0:16,0:16:39.12:0,39,1846	0/0:25,0:23:45.14:0,45,2196	0/0:21,0:18:24.08:0,24,1238	0/0:28,0:26:60.18:0,60,3095	0/0:36,0:34:96.33:0,96,5574	0/0:34,0:30:60.14:0,60,2846	0/0:6,0:4:9.03:0,9,591
chr10	60297941	.	T	TAAA	4706.80	PASS	AB=0.855;AC=48;AF=0.857;AN=56;BaseQRankSum=-8.899;DP=509;FS=2.850;HRun=10;HaplotypeScore=75.5102;InbreedingCoeff=0.1422;MQ=53.44;MQ0=24;MQRankSum=4.682;QD=9.41;ReadPosRankSum=0.337;VQSLOD=0.7990;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,0:11:8.97:68,9,0	1/1:0,0:9:11.96:93,12,0	0/1:14,0:11:28.03:28,0,166	0/1:7,0:3:2.98:3,0,64	1/1:9,0:33:41.84:320,42,0	0/1:12,0:9:54.89:191,0,55	0/0:7,0:6:15.04:0,15,182	1/1:1,2:4:6.02:94,6,0	1/1:4,0:21:35.86:275,36,0	1/1:6,0:25:38.92:398,39,0	1/1:2,0:16:23.93:199,24,0	1/1:4,1:16:26.73:241,27,0	1/1:3,0:16:23.72:184,24,0	1/1:4,0:12:20.94:195,21,0	1/1:1,1:14:14.96:149,15,0	1/1:3,0:7:20.94:168,21,0	1/1:3,0:10:5.98:46,6,0	1/1:4,0:5:5.98:46,6,0	1/1:6,0:19:44.83:346,45,0	1/1:5,0:30:47.65:362,48,0	1/1:2,1:15:11.95:92,12,0	0/1:17,0:17:35.31:35,0,428	0/1:17,0:20:99:149,0,516	0/1:8,0:8:36.16:36,0,165	1/1:3,0:26:26.90:206,27,0	1/1:15,0:29:47.75:361,48,0	1/1:3,1:22:32.88:286,33,0	1/1:2,1:14:17.93:137,18,0
chr10	60300807	.	GA	G	2855.84	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=13.165;DP=571;FS=6.393;HRun=4;HaplotypeScore=63.4939;InbreedingCoeff=0.9591;MQ=52.62;MQ0=33;MQRankSum=2.950;QD=24.20;ReadPosRankSum=-0.224;VQSLOD=2.2379;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:27:50.63:0,51,874	0/0:5,0:5:15.05:0,15,210	0/0:27,0:9:3.86:0,4,307	0/0:22,0:7:15.05:0,15,204	0/0:23,0:22:66.22:0,66,924	1/1:1,15:16:36.11:429,36,0	1/1:1,15:15:36.11:432,36,0	1/1:4,20:13:33.09:384,33,0	0/0:19,0:19:45.15:0,45,629	0/0:24,0:23:66.22:0,66,924	0/0:12,0:12:33.10:0,33,446	0/0:20,0:20:51.17:0,51,713	0/0:26,0:25:72.24:0,72,1006	0/0:22,0:22:63.14:0,63,857	0/0:34,0:34:81.20:0,81,1109	0/0:20,0:20:54.17:0,54,737	0/0:26,0:25:51.51:0,52,661	0/0:9,0:9:18.06:0,18,252	0/0:14,0:8:21.07:0,21,290	0/0:27,0:27:72.23:0,72,989	0/0:10,0:8:18.06:0,18,252	1/1:1,18:18:51.16:612,51,0	1/1:0,25:25:66.20:791,66,0	1/1:0,18:18:33.10:396,33,0	0/0:19,0:18:54.18:0,54,756	0/0:16,0:16:48.16:0,48,672	0/0:39,0:35:96.32:0,96,1340	0/0:10,0:10:27.56:0,28,378
chr10	60301708	.	GA	G	2706.80	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=9.488;DP=565;FS=5.537;HRun=3;HaplotypeScore=58.3860;InbreedingCoeff=0.9909;MQ=62.99;MQ0=3;MQRankSum=-3.739;QD=28.20;ReadPosRankSum=-0.624;VQSLOD=2.4204;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,2:28:41.07:0,41,999	0/0:11,0:11:33.11:0,33,475	0/0:15,0:15:39.11:0,39,506	0/0:13,0:13:16.26:0,16,421	0/0:28,0:28:78.26:0,78,1120	1/1:0,18:18:48.15:592,48,0	1/1:1,14:14:39.12:478,39,0	1/1:2,22:18:48.13:571,48,0	0/0:22,0:22:63.21:0,63,905	0/0:36,0:36:99:0,99,1397	0/0:21,0:21:57.19:0,57,821	0/0:17,0:17:48.16:0,48,691	0/0:27,0:27:75.25:0,75,1077	0/0:16,0:16:45.14:0,45,626	0/0:25,0:25:72.24:0,72,1036	0/0:19,0:19:54.17:0,54,759	0/0:32,1:32:89.04:0,89,1197	0/0:23,0:23:49.31:0,49,928	0/0:17,0:17:51.17:0,51,734	0/0:26,0:26:75.23:0,75,1060	0/0:14,0:14:42.14:0,42,604	1/1:1,10:10:27.08:331,27,0	1/1:0,21:21:63.20:773,63,0	1/1:0,7:6:12.04:149,12,0	0/0:15,0:15:42.13:0,42,590	0/0:24,0:24:69.23:0,69,994	0/0:28,0:28:84.28:0,84,1209	0/0:10,0:10:30.08:0,30,412
chr10	60302685	.	G	GATGATATGATAGTACAC	3743.13	PASS	AB=1.000;AC=11;AF=0.204;AN=54;BaseQRankSum=-2.391;DP=554;FS=14.708;HRun=0;HaplotypeScore=217.5834;InbreedingCoeff=0.7558;MQ=60.27;MQ0=24;MQRankSum=-7.965;QD=31.45;ReadPosRankSum=-2.457;VQSLOD=1.4084;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:43.38:0,43,3201	0/0:6,0:6:18.06:0,18,813	0/0:30,0:23:69.13:0,69,2661	0/0:27,0:21:63.12:0,63,2364	0/0:21,0:20:60.16:0,60,2360	./.	1/1:2,6:10:15.05:1249,15,0	1/1:23,0:15:36.02:1242,36,0	0/0:16,0:16:42.13:0,42,1761	0/0:22,0:21:57.20:0,57,2477	0/0:26,0:26:72.24:0,72,3284	0/0:11,0:11:33.11:0,33,1563	0/0:23,0:23:66.19:0,66,2902	0/0:19,0:18:51.16:0,51,2295	0/0:21,0:21:60.21:0,60,2876	0/0:18,0:18:51.16:0,51,2299	0/1:35,0:35:99:254,0,3722	0/0:16,0:16:45.14:0,45,1981	0/0:21,0:20:54.14:0,54,2236	0/0:33,0:33:96.30:0,96,4510	0/0:23,0:23:66.23:0,66,3157	1/1:3,7:16:6.02:499,6,0	1/1:4,4:13:3.01:250,3,0	1/1:2,4:4:3.01:250,3,0	0/0:15,0:15:42.12:0,42,1839	0/0:15,0:15:42.13:0,42,1817	0/0:26,0:25:72.23:0,72,3283	0/0:4,0:4:9.01:0,9,239
chr10	60303334	.	G	GAA	13651.23	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-2.487;DP=500;FS=9.172;HRun=8;HaplotypeScore=78.9296;InbreedingCoeff=0.8802;MQ=55.11;MQ0=13;MQRankSum=0.755;QD=28.74;ReadPosRankSum=1.869;VQSLOD=4.2387;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,39:42:89.79:1382,90,0	1/1:1,6:7:18.06:285,18,0	0/0:15,0:8:20.88:0,21,205	0/0:9,0:5:12.02:0,12,127	1/1:3,28:30:72.12:1050,72,0	1/1:14,0:14:30.05:307,30,0	1/1:12,0:11:21:209,21,0	1/1:13,0:11:26.73:222,27,0	1/1:2,19:21:51.08:753,51,0	1/1:1,18:19:51.17:789,51,0	1/1:2,18:22:39.55:550,40,0	1/1:3,14:17:30.06:448,30,0	1/1:1,22:24:51.17:809,51,0	1/1:2,15:18:36.11:548,36,0	1/1:0,12:12:21.07:333,21,0	1/1:1,11:11:24.05:347,24,0	1/1:6,26:31:66.22:1036,66,0	1/1:1,5:6:9.03:143,9,0	1/1:6,14:18:42.13:644,42,0	1/1:1,18:19:48.16:752,48,0	1/1:1,12:14:30.06:448,30,0	1/1:6,0:5:11.99:123,12,0	1/1:18,0:16:39:375,39,0	1/1:29,0:29:60.57:595,61,0	1/1:1,13:15:33.11:515,33,0	1/1:3,0:24:53.89:187,54,0	1/1:1,22:23:51.13:781,51,0	1/1:1,0:3:5.88:19,6,0
chr10	60303342	.	A	AAAC	6053.96	PASS	AB=1.000;AC=38;AF=0.679;AN=56;BaseQRankSum=1.135;DP=515;FS=12.617;HRun=0;HaplotypeScore=117.9024;InbreedingCoeff=0.1661;MQ=55.18;MQ0=12;MQRankSum=0.236;QD=13.05;ReadPosRankSum=8.059;VQSLOD=3.0245;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:39,0:38:67.28:282,67,0	1/1:6,0:6:15.17:55,15,0	0/0:13,0:8:24.03:0,24,315	0/0:9,0:5:10.58:0,11,153	1/1:30,0:28:16.60:163,17,0	1/1:0,16:19:30.10:645,30,0	1/1:0,11:11:21.03:432,21,0	1/1:4,14:13:38.96:667,39,0	1/1:23,0:23:18.34:130,18,0	0/1:21,0:21:8.70:97,0,9	0/1:24,0:24:42.64:43,0,82	0/1:16,0:16:2.11:71,0,2	1/1:24,0:24:24.84:133,25,0	0/1:18,0:18:16.78:64,0,17	1/1:12,0:12:17.67:64,18,0	0/1:13,0:13:38.22:86,0,38	0/1:33,0:33:9.10:129,0,9	0/1:7,0:7:14.19:14,0,28	0/1:18,0:16:33.67:76,0,34	0/1:23,0:23:80.41:81,0,80	0/1:15,0:15:17.02:68,0,17	1/1:2,5:6:12:223,12,0	1/1:2,19:19:10.47:884,10,0	1/1:0,27:27:60.20:1391,60,0	1/1:16,0:16:3.58:103,4,0	0/0:26,0:26:48.85:0,49,245	1/1:21,0:21:21.83:152,22,0	0/0:3,0:3:7.54:0,8,30
chr10	60303729	.	AAGG	A	188.44	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=5.870;DP=545;FS=0.000;HRun=0;HaplotypeScore=77.8216;InbreedingCoeff=0.7790;MQ=51.12;MQ0=29;MQRankSum=-5.741;QD=6.28;ReadPosRankSum=0.160;VQSLOD=2.2348;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:93.24:0,93,2048	0/0:13,0:13:39.13:0,39,902	0/0:20,0:4:12.04:0,12,284	0/0:21,0:4:12.04:0,12,284	0/0:25,0:25:69.24:0,69,1610	0/0:2,0:2:2.99:0,3,23	1/1:0,2:1:3.01:33,3,0	0/0:9,0:4:11.58:0,12,75	0/0:16,0:16:42.14:0,42,989	0/0:32,0:31:90.31:0,90,2107	0/0:26,0:26:72.25:0,72,1666	0/0:23,0:23:63.17:0,63,1415	0/0:28,0:28:77.86:0,78,1800	0/0:32,0:32:84.16:0,84,1906	0/0:15,0:14:36.12:0,36,812	0/0:20,0:20:54.17:0,54,1208	0/0:25,0:25:66.20:0,66,1423	0/0:23,0:23:63.22:0,63,1427	0/0:14,0:11:30.10:0,30,709	0/0:25,0:25:75.26:0,75,1725	0/0:24,0:24:72.20:0,72,1574	1/1:2,4:2:3:29,3,0	1/1:2,6:5:12.02:119,12,0	1/1:8,6:14:5.84:136,6,0	0/0:17,0:16:45.15:0,45,1059	0/0:20,0:20:60.21:0,60,1400	0/0:31,0:31:81.28:0,81,1905	0/0:17,0:17:48.16:0,48,1135
chr10	60303730	.	A	AC	314.19	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=5.218;DP=533;FS=3.198;HRun=0;HaplotypeScore=57.8454;InbreedingCoeff=0.8531;MQ=51.27;MQ0=29;MQRankSum=-6.021;QD=7.85;ReadPosRankSum=-1.661;VQSLOD=3.0150;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:90.24:0,90,1212	0/0:13,0:13:39.12:0,39,527	0/0:19,0:4:12.04:0,12,168	0/0:19,0:4:12.04:0,12,168	0/0:24,0:24:69.21:0,69,945	1/1:0,2:2:3.01:47,3,0	1/1:2,0:1:2.80:13,3,0	1/1:4,4:4:12.04:191,12,0	0/0:16,0:16:42.14:0,42,585	0/0:31,0:30:90.29:0,90,1239	0/0:26,0:26:71.60:0,72,972	0/0:23,0:23:63.15:0,63,839	0/0:28,0:28:78.19:0,78,1050	0/0:32,0:32:81.25:0,81,1113	0/0:14,0:13:36.09:0,36,469	0/0:19,0:19:54.14:0,54,716	0/0:24,0:24:66.16:0,66,849	0/0:22,0:22:63.20:0,63,864	0/0:13,0:10:30.09:0,30,404	0/0:25,0:25:75.16:0,75,974	0/0:24,0:24:72.17:0,72,943	1/1:5,1:2:2.50:9,2,0	1/1:7,1:5:10.21:38,10,0	1/1:6,8:14:19.31:172,19,0	0/0:17,0:16:45.11:0,45,607	0/0:21,0:21:60.19:0,60,825	0/0:30,0:30:81.27:0,81,1115	0/0:17,0:17:48.16:0,48,670
chr10	60303734	.	CACTGTTGTTA	C	875.30	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=6.514;DP=524;FS=5.226;HRun=0;HaplotypeScore=138.4447;InbreedingCoeff=0.8495;MQ=51.15;MQ0=30;MQRankSum=-6.109;QD=25.01;ReadPosRankSum=-1.432;VQSLOD=2.3843;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:93.32:0,93,4943	0/0:13,0:13:39.13:0,39,2038	0/0:18,0:4:12.04:0,12,604	0/0:19,0:4:12.01:0,12,476	0/0:25,0:24:69.24:0,69,3446	1/1:1,0:1:3.01:34,3,0	1/1:0,2:1:3.01:85,3,0	1/1:7,0:3:8.92:99,9,0	0/0:15,0:15:39.13:0,39,2140	0/0:31,0:30:90.31:0,90,4910	0/0:27,0:27:75.26:0,75,3906	0/0:22,0:22:57.20:0,57,3005	0/0:29,0:29:80.89:0,81,4398	0/0:31,0:31:84.29:0,84,4488	0/0:16,0:15:42.13:0,42,2135	0/0:17,0:17:48.16:0,48,2636	0/0:21,0:21:57.20:0,57,3088	0/0:22,0:22:63.22:0,63,3247	0/0:14,0:10:30.10:0,30,1466	0/0:25,0:25:75.26:0,75,3973	0/0:23,0:23:69.24:0,69,3525	1/1:2,4:2:3.01:81,3,0	1/1:1,6:4:12.04:327,12,0	1/1:6,6:12:15.03:406,15,0	0/0:17,0:16:45.15:0,45,2355	0/0:22,0:22:66.22:0,66,3432	0/0:29,0:29:78.27:0,78,3956	0/0:18,0:18:51.18:0,51,2648
chr10	60304368	.	CT	C	589.57	PASS	AB=0.636;AC=9;AF=0.180;AN=50;BaseQRankSum=3.373;DP=618;FS=1.864;HRun=3;HaplotypeScore=66.5485;InbreedingCoeff=0.7592;MQ=39.02;MQ0=109;MQRankSum=-5.465;QD=9.07;ReadPosRankSum=-2.664;VQSLOD=0.2269;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:33:57.17:0,57,797	0/0:7,0:5:15.05:0,15,210	./.	./.	0/0:26,0:22:32.79:0,33,425	1/1:0,22:19:33.10:408,33,0	0/1:3,4:5:34.05:65,0,34	./.	0/0:23,0:21:39.10:0,39,543	0/0:32,0:24:66.22:0,66,950	0/0:16,0:14:15.05:0,15,216	0/0:29,0:28:60.18:0,60,863	0/0:17,0:15:21.02:0,21,302	0/0:32,0:30:53.88:0,54,760	0/0:24,0:24:48.16:0,48,691	0/0:24,0:24:54.08:0,54,777	0/0:26,0:17:21.07:0,21,302	0/0:17,0:13:15.05:0,15,216	0/0:24,0:14:42.14:0,42,605	0/0:37,0:25:48.16:0,48,690	0/0:32,0:23:42.10:0,42,581	1/1:4,12:11:12.04:148,12,0	1/1:7,4:3:6.02:74,6,0	1/1:7,2:2:3.01:37,3,0	0/0:25,0:22:30.06:0,30,408	0/0:34,0:31:87.29:0,87,1252	0/0:31,0:31:78.22:0,78,1099	0/0:25,0:11:33.11:0,33,475
chr10	60304576	.	T	TAC	323.36	PASS	AC=6;AF=0.111;AN=54;BaseQRankSum=5.250;DP=461;FS=0.000;HRun=0;HaplotypeScore=64.1280;InbreedingCoeff=0.8071;MQ=62.47;MQ0=2;MQRankSum=-3.919;QD=14.06;ReadPosRankSum=-2.369;VQSLOD=2.9755;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:48:99:0,132,2107	0/0:9,0:9:27.09:0,27,432	0/0:19,0:11:32.93:0,33,427	0/0:13,0:5:11.99:0,12,140	0/0:33,0:32:64.73:0,65,959	0/0:2,0:1:0.47:0,0,1	1/1:2,4:6:9.03:142,9,0	./.	0/0:23,0:23:66.21:0,66,1048	0/0:24,0:24:72.24:0,72,1150	0/0:15,0:15:45.15:0,45,724	0/0:10,0:10:30.10:0,30,488	0/0:9,0:9:21.07:0,21,342	0/0:14,0:14:33.11:0,33,535	0/0:16,0:16:30.06:0,30,457	0/0:14,0:14:36.10:0,36,540	0/0:33,0:33:87.29:0,87,1385	0/0:8,0:8:21.07:0,21,343	0/0:23,0:20:60.20:0,60,971	0/0:18,0:18:48.13:0,48,744	0/0:18,0:18:54.18:0,54,866	1/1:7,0:7:2.47:128,2,0	1/1:10,0:8:14.90:173,15,0	0/0:4,5:9:1.98:0,2,3	0/0:23,0:23:66.22:0,66,1043	0/0:20,0:19:57.18:0,57,891	0/0:21,0:20:54.17:0,54,855	0/0:10,0:10:27.09:0,27,439
chr10	60305024	.	CCA	C	748.19	PASS	AB=0.532;AC=11;AF=0.212;AN=52;BaseQRankSum=5.063;DP=658;FS=2.140;HRun=0;HaplotypeScore=62.3926;InbreedingCoeff=0.7484;MQ=35.02;MQ0=107;MQRankSum=-2.776;QD=5.27;ReadPosRankSum=-2.049;VQSLOD=2.2987;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:42:12.04:0,12,231	0/0:8,0:7:15.05:0,15,285	./.	./.	0/0:21,0:15:18.06:0,18,347	1/1:1,27:22:15.05:229,15,0	1/1:5,17:10:15.05:228,15,0	1/1:6,13:4:9.03:138,9,0	0/0:29,0:25:30.10:0,30,576	0/0:22,0:16:45.11:0,45,818	0/0:16,0:12:9.03:0,9,173	0/0:21,0:20:27.08:0,27,520	0/0:30,0:27:41.57:0,42,771	0/0:25,0:25:33.11:0,33,633	0/0:39,0:36:42.14:0,42,810	0/0:20,0:18:18.06:0,18,346	0/0:34,0:29:24.08:0,24,463	0/0:20,0:13:3.01:0,3,58	0/0:12,0:5:15.05:0,15,290	0/0:25,0:22:36.07:0,36,693	0/0:38,0:17:12.04:0,12,231	0/1:3,22:11:48.81:83,0,49	1/1:4,12:9:6.02:92,6,0	1/1:12,20:16:9.03:138,9,0	0/0:23,0:20:18.06:0,18,347	0/0:30,0:22:66.23:0,66,1275	0/0:30,0:29:39.13:0,39,749	0/0:15,0:5:12.04:0,12,232
chr10	60305451	.	G	GA	2796.93	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-3.043;DP=491;FS=1.463;HRun=6;HaplotypeScore=51.4767;InbreedingCoeff=0.9547;MQ=62.72;MQ0=4;MQRankSum=-4.301;QD=27.15;ReadPosRankSum=-3.178;VQSLOD=2.6511;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:22.84:0,23,406	0/0:10,0:10:24.05:0,24,245	0/0:16,0:11:19.81:0,20,263	0/0:12,0:11:3.77:0,4,106	0/0:20,0:20:54.12:0,54,551	1/1:0,16:16:39.12:490,39,0	1/1:0,7:7:21.07:264,21,0	1/1:6,26:30:44.59:846,45,0	0/0:18,0:18:54.12:0,54,551	0/0:23,0:23:66.15:0,66,673	0/0:23,0:23:63.09:0,63,625	0/0:13,0:13:30.07:0,30,306	0/0:15,0:15:39.08:0,39,397	0/0:17,0:17:48.11:0,48,490	0/0:19,0:19:54.12:0,54,551	0/0:14,0:14:33.07:0,33,337	0/0:12,0:12:9.33:0,9,310	0/0:19,0:19:54.10:0,54,542	0/0:21,0:20:54.11:0,54,546	0/0:30,0:30:81.18:0,81,826	0/0:8,0:8:24.05:0,24,245	1/1:3,13:16:36.11:440,36,0	1/1:2,15:17:39.12:491,39,0	1/1:3,12:15:36.12:453,36,0	0/0:20,0:20:45.10:0,45,459	0/0:27,0:27:78.15:0,78,785	0/0:21,0:21:57.13:0,57,581	0/0:9,0:9:24.05:0,24,244
chr10	60307461	.	TA	T	1869.94	PASS	AC=12;AF=0.222;AN=54;BaseQRankSum=10.897;DP=508;FS=12.800;HRun=5;HaplotypeScore=57.1887;InbreedingCoeff=0.9773;MQ=55.94;MQ0=19;MQRankSum=-1.880;QD=19.48;ReadPosRankSum=-1.136;VQSLOD=1.8365;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:15:36.12:0,36,482	0/0:9,0:9:24.05:0,24,307	0/0:13,0:5:12.03:0,12,140	./.	0/0:30,0:30:75.25:0,75,1025	1/1:1,16:14:36.10:408,36,0	1/1:0,13:10:27.08:306,27,0	1/1:2,13:14:36.09:398,36,0	0/0:12,0:10:21.03:0,21,266	0/0:25,0:25:69.14:0,69,859	0/0:24,0:22:57.19:0,57,774	0/0:15,0:14:33.11:0,33,451	0/0:15,0:13:36.03:0,36,467	0/0:16,0:13:30.09:0,30,391	0/0:20,0:19:45.15:0,45,614	0/0:6,0:6:18.06:0,18,246	0/0:27,0:25:63.21:0,63,860	0/0:21,0:18:45.15:0,45,608	0/0:13,0:9:24.08:0,24,328	0/0:31,0:31:84.22:0,84,1099	0/0:13,0:13:39.13:0,39,533	1/1:1,19:19:36.10:408,36,0	1/1:1,24:25:41.92:448,42,0	1/1:1,5:6:8.94:85,9,0	0/0:22,0:22:45.15:0,45,615	0/0:27,0:25:69.19:0,69,922	0/0:27,0:24:63.21:0,63,861	0/0:12,0:11:24.08:0,24,323
chr10	60307558	.	G	GGA	2088.44	PASS	AC=34;AF=0.680;AN=50;BaseQRankSum=5.977;DP=352;FS=72.986;HRun=0;HaplotypeScore=60.2710;InbreedingCoeff=0.7195;MQ=57.37;MQ0=49;MQRankSum=-5.876;QD=14.81;ReadPosRankSum=-1.224;VQSLOD=0.4330;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,7:3:3.01:61,3,0	1/1:0,1:1:3.01:61,3,0	0/0:28,0:26:72.24:0,72,1122	0/0:18,0:17:48.11:0,48,722	1/1:1,5:1:2.97:20,3,0	0/0:36,0:36:99:0,99,1582	0/0:18,0:17:48.13:0,48,753	0/0:29,0:28:84.27:0,84,1318	1/1:1,9:5:12.04:238,12,0	1/1:4,11:6:18:256,18,0	1/1:0,13:3:6.02:121,6,0	1/1:1,6:2:6.02:117,6,0	1/1:2,6:4:6.02:121,6,0	1/1:1,4:2:6.02:99,6,0	1/1:1,8:5:12.04:243,12,0	1/1:1,2:1:3.01:61,3,0	./.	1/1:1,2:3:9.01:144,9,0	./.	1/1:1,13:5:12.04:243,12,0	./.	0/0:26,0:25:72.25:0,72,1173	0/0:28,0:28:78.27:0,78,1263	0/0:21,0:21:63.17:0,63,997	1/1:2,8:2:3.01:61,3,0	1/1:3,9:6:9.03:182,9,0	1/1:0,10:1:3.01:61,3,0	1/1:0,5:3:9.03:182,9,0
chr10	60307616	.	C	CAAT	9441.25	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=3.720;DP=436;FS=16.305;HRun=0;HaplotypeScore=93.2240;InbreedingCoeff=0.9510;MQ=49.06;MQ0=33;MQRankSum=-6.595;QD=35.90;ReadPosRankSum=3.699;VQSLOD=4.5728;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,14:12:24.08:447,24,0	1/1:0,5:4:9.03:204,9,0	0/0:19,0:11:27.07:0,27,410	0/0:26,0:25:56.38:0,56,929	1/1:1,13:10:18.06:407,18,0	0/0:32,0:31:60.19:0,60,968	0/0:13,0:11:24.04:0,24,369	0/0:18,0:17:45.13:0,45,695	1/1:1,13:12:36.12:781,36,0	1/1:3,10:10:30.09:611,30,0	1/1:2,7:5:12:223,12,0	1/1:1,14:9:24.08:541,24,0	1/1:3,12:12:21.07:474,21,0	1/1:3,11:9:24.08:542,24,0	1/1:4,17:14:39.09:834,39,0	1/1:1,12:10:27.09:610,27,0	1/1:2,9:7:18.06:375,18,0	1/1:1,3:4:8.66:182,9,0	1/1:4,7:7:18.06:361,18,0	1/1:3,14:14:42.06:821,42,0	1/1:1,9:10:12.04:272,12,0	0/0:21,0:15:33.11:0,33,549	0/0:17,0:15:36.11:0,36,568	0/0:27,0:27:45.15:0,45,749	1/1:3,6:5:15.05:313,15,0	1/1:5,10:10:27.09:600,27,0	1/1:4,21:13:36.12:782,36,0	1/1:1,3:3:8.92:62,9,0
chr10	60316807	.	GA	G	305.69	PASS	AC=2;AF=0.25;AN=8;BaseQRankSum=-0.118;DP=141;FS=0.000;HRun=1;HaplotypeScore=17.3320;MQ=23.78;MQ0=103;MQRankSum=-0.589;QD=15.28;ReadPosRankSum=1.532;VQSLOD=3.0508;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:33,0:1:3.01:0,3,48	0/0:40,0:2:0:0,0,0	./.	./.	./.	1/1:11,9:9:27.09:376,27,0	./.	./.	0/0:1,0:1:3.01:0,3,43	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.
chr10	60320676	.	ACG	A	1077.17	PASS	AB=0.974;AC=13;AF=0.232;AN=56;BaseQRankSum=6.602;DP=591;FS=21.583;HRun=0;HaplotypeScore=147.8200;InbreedingCoeff=0.6456;MQ=54.40;MQ0=15;MQRankSum=-1.210;QD=7.13;ReadPosRankSum=-1.182;VQSLOD=1.5521;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:52.15:0,52,369	0/0:13,0:13:27.84:0,28,193	0/0:23,0:9:4.31:0,4,104	0/0:26,0:10:19.64:0,20,149	0/0:22,0:22:36.45:0,36,210	1/1:13,4:17:9.95:193,10,0	1/1:15,4:18:23.52:192,24,0	1/1:7,16:21:39.89:332,40,0	0/0:22,0:21:24.74:0,25,151	0/0:24,1:24:43.26:0,43,378	0/0:12,0:12:5.72:0,6,89	0/0:19,0:18:33.69:0,34,253	0/1:22,0:22:5.86:6,0,171	0/0:36,0:36:66.73:0,67,402	0/0:18,1:19:12.50:0,13,184	0/0:12,0:12:8.73:0,9,154	0/0:25,0:24:46.58:0,47,322	0/0:17,0:17:17.82:0,18,154	0/0:18,0:17:21.60:0,22,167	0/0:18,0:18:39.26:0,39,300	0/0:43,0:42:12.02:0,12,113	1/1:10,1:11:20.96:170,21,0	0/1:11,1:12:18.67:92,0,19	1/1:20,3:23:34.19:260,34,0	0/0:18,1:19:11.99:0,12,169	0/1:24,0:24:8.75:9,0,181	0/0:22,0:22:45.81:0,46,273	0/0:8,0:6:13.84:0,14,73
chr10	60320678	.	GCACA	G	4453.07	PASS	AB=0.883;AC=37;AF=0.712;AN=52;BaseQRankSum=-4.345;DP=585;FS=8.491;HRun=0;HaplotypeScore=153.5097;InbreedingCoeff=0.3004;MQ=54.36;MQ0=16;MQRankSum=-0.335;QD=9.60;ReadPosRankSum=6.254;VQSLOD=2.8958;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:26,11:39:14.73:233,15,0	1/1:8,6:14:5.87:93,6,0	./.	./.	1/1:12,7:21:11.83:154,12,0	0/1:17,0:16:31.84:54,0,32	0/0:22,0:21:8.98:0,9,75	0/0:20,0:18:7.49:0,7,43	1/1:9,9:20:17.23:191,17,0	1/1:21,2:22:2.06:174,2,0	0/0:6,4:11:1.54:0,2,4	1/1:14,4:19:11.65:168,12,0	1/1:7,15:22:32.07:474,32,0	1/1:20,15:38:18.35:407,18,0	1/1:13,4:19:21.02:277,21,0	1/1:11,1:12:8.86:121,9,0	0/1:17,9:27:6.71:194,0,7	1/1:6,10:17:30.05:438,30,0	1/1:14,1:16:3.30:70,3,0	0/1:12,6:18:14.93:128,0,15	0/1:39,2:41:68.76:76,0,69	0/0:10,0:10:0:0,0,0	0/0:11,0:11:8.94:0,9,85	0/1:25,0:25:23.20:23,0,62	1/1:10,7:18:21.06:302,21,0	1/1:14,8:23:24.29:415,24,0	1/1:17,5:23:12.94:273,13,0	1/1:4,4:6:12.04:187,12,0
chr10	60320682	.	A	ACG	4094.36	PASS	AB=0.895;AC=36;AF=0.643;AN=56;BaseQRankSum=-7.538;DP=600;FS=17.543;HRun=0;HaplotypeScore=149.2793;InbreedingCoeff=0.6632;MQ=52.86;MQ0=18;MQRankSum=4.313;QD=9.35;ReadPosRankSum=2.931;VQSLOD=2.5524;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:38,0:38:52.54:350,53,0	1/1:13,0:13:25.50:176,26,0	0/0:19,0:5:2.14:0,2,39	0/0:23,0:8:14.91:0,15,126	1/1:20,0:20:33.25:196,33,0	0/0:19,0:18:19.47:0,19,159	0/0:21,0:20:29.68:0,30,242	0/0:26,0:24:59.11:0,59,407	0/1:22,0:21:14.23:126,0,14	1/1:24,1:23:34.14:405,34,0	1/1:11,0:11:13.97:98,14,0	1/1:19,0:18:37.91:229,38,0	1/1:23,0:23:15.58:178,16,0	1/1:37,0:37:19.83:244,20,0	1/1:19,0:19:33.48:265,33,0	1/1:12,1:13:25.90:213,26,0	1/1:27,0:26:28.75:308,29,0	1/1:17,0:17:32.99:167,33,0	0/1:17,0:16:9.96:118,0,10	1/1:16,0:16:3.19:176,3,0	0/1:12,29:43:40.23:40,0,68	0/0:11,0:11:17.98:0,18,149	0/0:15,0:14:20.93:0,21,206	0/0:27,0:27:50.09:0,50,354	1/1:18,0:18:17.40:169,17,0	1/1:24,0:24:28.63:258,29,0	1/1:24,0:24:27.90:297,28,0	0/1:11,0:9:0.34:80,0,0
chr10	60320719	.	CACAT	C	2693.75	PASS	AB=0.994;AC=28;AF=0.500;AN=56;BaseQRankSum=7.695;DP=608;FS=6.185;HRun=0;HaplotypeScore=154.5502;InbreedingCoeff=-0.3124;MQ=63.47;MQ0=10;MQRankSum=-1.720;QD=5.44;ReadPosRankSum=4.444;VQSLOD=2.1768;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:34,0:34:83.86:84,0,246	0/1:7,0:7:16.15:41,0,16	0/0:24,0:19:53.81:0,54,558	0/0:23,0:20:53.24:0,53,581	0/1:16,0:16:40.95:41,0,144	1/1:19,2:20:21.52:330,22,0	1/1:19,3:22:21.26:193,21,0	1/1:34,0:33:17.14:453,17,0	0/1:20,0:19:70.69:71,0,155	0/1:30,0:29:5.48:5,0,512	0/0:16,0:16:29.93:0,30,245	0/1:16,0:16:49.15:49,0,197	0/1:27,0:27:99:201,0,177	0/1:31,0:31:99:159,0,239	0/1:23,0:23:62.52:63,0,249	0/1:18,0:18:5.91:6,0,269	0/1:18,0:17:66.81:67,0,167	0/1:17,0:17:99:171,0,103	0/1:12,0:12:0.35:0,0,212	0/1:14,0:13:36.54:37,0,154	0/0:50,0:49:43.54:0,44,647	0/1:18,0:18:0:0,0,0	0/1:12,1:12:10.23:152,0,10	1/1:24,2:26:42.33:332,42,0	0/1:19,0:19:87.72:88,0,192	0/1:23,1:24:99:190,0,244	0/1:21,0:21:75.21:75,0,234	0/1:14,0:14:52.68:53,0,140
chr10	60320721	.	CAT	C	1561.71	PASS	AB=0.514;AC=11;AF=0.196;AN=56;BaseQRankSum=-3.093;DP=620;FS=17.422;HRun=0;HaplotypeScore=144.2582;InbreedingCoeff=0.9134;MQ=66.60;MQ0=10;MQRankSum=0.572;QD=11.65;ReadPosRankSum=-1.416;VQSLOD=2.0436;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:46.74:0,47,324	0/0:7,0:7:6.70:0,7,39	0/0:25,0:20:56.50:0,56,586	0/0:26,0:23:62.21:0,62,652	0/0:17,0:17:31.18:0,31,221	1/1:18,1:19:33.06:306,33,0	1/1:23,0:23:26.43:216,26,0	1/1:34,0:33:77.27:619,77,0	0/0:21,0:20:25.50:0,25,224	0/0:31,0:30:87.92:0,88,699	0/0:17,0:17:20.88:0,21,235	0/0:16,0:16:28.57:0,29,229	0/0:27,0:27:48.25:0,48,314	0/0:32,0:32:47.21:0,47,387	0/0:23,0:23:56.65:0,57,393	0/0:19,0:19:50.28:0,50,381	0/0:19,0:18:38.14:0,38,292	0/0:17,0:17:32.18:0,32,210	0/0:12,0:12:24.25:0,24,225	0/0:14,0:13:28.80:0,29,220	0/0:50,0:49:86.03:0,86,752	0/1:1,17:18:0:0,0,0	1/1:13,0:12:5.41:180,5,0	1/1:24,2:26:45.74:409,46,0	0/0:19,0:19:45.39:0,45,288	0/0:24,0:24:25.82:0,26,312	0/0:22,0:22:56.34:0,56,439	0/0:14,0:14:36.95:0,37,218
chr10	60321518	.	CTA	C	264.30	PASS	AB=1.000;AC=5;AF=0.114;AN=44;BaseQRankSum=3.851;DP=351;FS=0.000;HRun=0;HaplotypeScore=54.4644;InbreedingCoeff=0.4530;MQ=24.35;MQ0=141;MQRankSum=-1.646;QD=14.68;ReadPosRankSum=-0.046;VQSLOD=3.0217;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	0/0:7,0:4:9.03:0,9,182	./.	./.	0/0:21,0:15:12.04:0,12,243	0/0:10,0:6:6:0,6,51	1/1:2,7:8:18.06:293,18,0	./.	0/0:18,0:11:18.06:0,18,358	0/0:23,0:18:53.92:0,54,1047	0/0:22,0:17:33.11:0,33,667	0/0:11,0:7:9.03:0,9,183	0/0:11,0:7:8.66:0,9,182	0/0:14,0:12:15.05:0,15,304	0/0:17,0:8:9.03:0,9,182	0/0:11,0:8:18.06:0,18,365	0/0:12,0:5:6.02:0,6,121	./.	0/0:9,0:3:9.02:0,9,147	0/0:27,0:17:45.15:0,45,911	./.	0/0:5,0:4:3.47:0,3,27	0/1:5,0:2:18.67:43,0,19	1/1:3,1:3:3.01:40,3,0	0/0:13,0:9:24.08:0,24,486	0/0:22,0:12:36.12:0,36,731	0/0:18,0:12:21.03:0,21,384	0/0:8,0:4:6.02:0,6,122
chr10	60321520	.	A	ACAAGTGAAAGTATTGTGAACAAC	4001.23	PASS	AB=1.000;AC=11;AF=0.239;AN=46;BaseQRankSum=-0.710;DP=371;FS=0.000;HRun=0;HaplotypeScore=112.4116;InbreedingCoeff=0.7767;MQ=25.04;MQ0=144;MQRankSum=-2.446;QD=61.56;ReadPosRankSum=-1.206;VQSLOD=2.7783;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/0:7,0:4:9.03:0,9,368	./.	./.	0/0:21,0:15:11.87:0,12,534	1/1:3,4:9:12:775,12,0	1/1:11,0:8:18.06:1501,18,0	./.	0/0:18,0:11:15.05:0,15,853	0/0:23,0:18:54.19:0,54,2659	0/0:23,0:17:33.11:0,33,1312	0/0:9,0:5:9.03:0,9,410	0/0:13,0:9:8.52:0,9,577	0/0:14,0:12:15.05:0,15,887	0/0:16,0:7:9.03:0,9,440	0/0:11,0:8:17.82:0,18,1083	0/0:12,0:5:6.02:0,6,231	./.	0/0:8,0:2:6.02:0,6,350	0/0:25,0:16:45.15:0,45,2004	0/1:11,0:2:0:0,0,0	1/1:3,2:12:8.99:679,9,0	1/1:2,5:9:8.76:732,9,0	1/1:6,0:4:8.99:314,9,0	0/0:14,0:10:24.08:0,24,956	0/0:22,0:12:36.12:0,36,2178	0/0:18,0:12:21.03:0,21,783	0/0:8,0:4:6.02:0,6,201
chr10	60325161	.	A	AT	11449.33	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=-12.680;DP=484;FS=0.493;HRun=7;HaplotypeScore=63.1110;InbreedingCoeff=0.9635;MQ=65.12;MQ0=6;MQRankSum=-0.834;QD=29.89;ReadPosRankSum=2.254;VQSLOD=5.2426;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,21:21:63.19:761,63,0	1/1:3,11:13:33.10:399,33,0	0/0:11,0:11:12:0,12,116	0/0:17,0:14:31.27:0,31,264	1/1:3,28:31:81.16:943,81,0	0/0:15,0:13:11.84:0,12,70	0/0:5,0:3:6.43:0,6,28	1/1:15,0:11:22.87:121,23,0	1/1:0,11:11:30.09:362,30,0	1/1:2,23:25:69.20:823,69,0	1/1:4,19:23:48.11:563,48,0	1/1:1,14:15:42.13:507,42,0	1/1:4,18:22:54.17:652,54,0	1/1:1,13:14:33.10:399,33,0	1/1:0,12:12:33.10:399,33,0	1/1:2,14:16:39.12:471,39,0	1/1:2,29:31:75.23:906,75,0	1/1:1,11:12:33.10:399,33,0	1/1:1,8:8:24.07:290,24,0	1/1:0,27:27:81.25:979,81,0	1/1:0,6:6:15.05:181,15,0	0/0:23,0:22:38.36:0,38,187	0/0:20,0:18:23.29:0,23,140	0/0:10,0:9:17.85:0,18,76	1/1:4,17:21:42.10:493,42,0	1/1:2,22:24:69.17:798,69,0	1/1:2,24:26:63.18:750,63,0	1/1:0,8:8:21.06:254,21,0
chr10	60325168	.	T	TAA	3454.17	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-5.174;DP=496;FS=6.929;HRun=3;HaplotypeScore=102.2473;InbreedingCoeff=0.9638;MQ=65.14;MQ0=3;MQRankSum=-2.692;QD=37.14;ReadPosRankSum=-2.906;VQSLOD=2.3103;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:65.38:0,65,499	0/0:12,0:11:35.76:0,36,287	0/0:10,0:9:6.02:0,6,176	0/0:16,0:14:38.93:0,39,474	0/0:31,0:31:59.71:0,60,669	1/1:0,14:13:39.13:685,39,0	1/1:1,6:5:9.03:162,9,0	1/1:1,0:15:32.13:178,32,0	0/0:12,0:12:32.89:0,33,274	0/0:23,0:23:65.95:0,66,567	0/0:23,0:23:59.92:0,60,558	0/0:17,0:17:44.86:0,45,373	0/0:22,0:22:65.56:0,66,575	0/0:16,0:16:41.96:0,42,376	0/0:13,0:13:35.94:0,36,306	0/0:17,0:17:44.95:0,45,394	0/0:30,0:30:80.35:0,80,650	0/0:12,0:12:35.92:0,36,300	0/0:9,0:8:26.71:0,27,218	0/0:29,0:29:86.81:0,87,708	0/0:7,0:7:17.97:0,18,158	1/1:1,25:25:75.26:1307,75,0	1/1:6,14:18:39.13:691,39,0	1/1:1,9:9:24.08:432,24,0	0/0:21,0:21:51.01:0,51,485	0/0:25,0:25:71.98:0,72,641	0/0:26,0:26:62.78:0,63,507	0/0:8,0:8:20.89:0,21,155
chr10	60326147	.	G	GA	531.11	PASS	AC=8;AF=0.154;AN=52;BaseQRankSum=6.234;DP=626;FS=15.466;HRun=0;HaplotypeScore=107.2484;InbreedingCoeff=0.9089;MQ=61.02;MQ0=27;MQRankSum=-2.455;QD=11.80;ReadPosRankSum=-2.353;VQSLOD=3.1187;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:25:69.23:0,69,964	0/0:12,0:12:36.12:0,36,500	0/0:22,0:19:51.03:0,51,653	0/0:26,0:26:63.67:0,64,853	0/0:41,0:41:99:0,117,1595	1/1:0,18:6:15.05:240,15,0	./.	./.	0/0:28,0:28:84.25:0,84,1140	0/0:29,0:29:84.28:0,84,1174	0/0:29,0:29:87.29:0,87,1216	0/0:24,0:24:69.23:0,69,965	0/0:25,0:25:75.24:0,75,1030	0/0:18,0:18:54.18:0,54,754	0/0:36,0:36:99:0,108,1510	0/0:24,0:24:72.21:0,72,970	0/0:24,0:24:72.24:0,72,1007	0/0:14,0:14:33.11:0,33,462	0/0:23,0:18:54.17:0,54,738	0/0:37,0:37:99:0,108,1456	0/0:30,0:30:87.25:0,87,1193	1/1:0,10:4:6.02:96,6,0	1/1:1,11:9:18.06:287,18,0	1/1:0,5:2:3.01:48,3,0	0/0:15,0:15:42.14:0,42,587	0/0:33,0:33:96.32:0,96,1340	0/0:34,0:34:99:0,99,1382	0/0:18,0:18:54.15:0,54,734
chr10	60326391	.	C	CT	1130.87	PASS	AB=0.751;AC=12;AF=0.214;AN=56;BaseQRankSum=7.374;DP=619;FS=24.934;HRun=3;HaplotypeScore=52.8304;InbreedingCoeff=0.7371;MQ=54.54;MQ0=13;MQRankSum=-5.168;QD=15.08;ReadPosRankSum=-2.844;VQSLOD=1.2804;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:27:72.23:0,72,893	0/0:11,0:11:33.10:0,33,409	0/0:20,0:10:30.09:0,30,367	0/0:20,0:7:18.06:0,18,223	0/0:35,0:35:99:0,99,1202	1/1:0,12:11:15.05:216,15,0	1/1:1,3:1:3.01:43,3,0	0/1:5,11:7:40.51:195,0,41	0/0:19,0:19:57.16:0,57,690	0/0:38,0:38:99:0,105,1302	0/0:33,0:33:99:0,99,1227	0/0:32,0:32:90.28:0,90,1115	0/0:22,0:22:66.21:0,66,818	0/0:17,0:17:48.15:0,48,595	0/0:27,0:27:75.21:0,75,903	0/0:20,0:20:60.19:0,60,744	0/0:34,0:33:99:0,99,1227	0/0:27,1:26:78.22:0,78,949	0/0:26,0:22:63.18:0,63,765	0/0:36,0:36:99:0,102,1263	0/0:21,0:21:57.18:0,57,706	1/1:0,11:9:24.08:327,24,0	1/1:3,7:7:15.04:197,15,0	1/1:1,11:9:21.07:301,21,0	0/0:18,0:18:54.15:0,54,655	0/0:35,0:35:99:0,102,1264	0/0:24,0:24:69.20:0,69,841	0/1:9,1:9:25.06:25,0,168
chr10	60326654	.	T	TGGA	425.13	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=6.217;DP=559;FS=3.800;HRun=0;HaplotypeScore=68.9835;InbreedingCoeff=0.8121;MQ=58.68;MQ0=1;MQRankSum=-4.289;QD=10.90;ReadPosRankSum=-1.878;VQSLOD=2.8273;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,99,1749	0/0:9,0:9:21.04:0,21,363	0/0:23,0:4:12.04:0,12,212	0/0:30,0:7:21.07:0,21,391	0/0:34,0:33:81.28:0,81,1510	1/1:2,10:7:18:232,18,0	1/1:1,2:2:3.01:52,3,0	1/1:4,4:4:8.75:92,9,0	0/0:31,0:30:87.25:0,87,1557	0/0:27,0:26:78.26:0,78,1413	0/0:26,0:25:66.18:0,66,1194	0/0:21,0:21:63.19:0,63,1102	0/0:20,0:20:60.19:0,60,1063	0/0:31,0:31:93.32:0,93,1734	0/0:37,0:36:99:0,108,1965	0/0:18,0:18:54.19:0,54,1007	0/0:29,0:29:78.25:0,78,1410	0/0:15,0:14:36.12:0,36,671	0/0:22,0:21:60.21:0,60,1106	0/0:21,0:21:48.16:0,48,882	0/0:19,0:19:42.14:0,42,770	1/1:4,3:7:6.02:106,6,0	0/1:4,0:4:0:0,0,0	1/1:2,3:4:6.02:91,6,0	0/0:25,0:25:66.23:0,66,1231	0/0:28,0:28:81.27:0,81,1467	0/0:15,0:15:42.10:0,42,747	0/0:3,0:3:3.01:0,3,56
chr10	60326655	.	T	TATGGA	771.63	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=4.914;DP=568;FS=1.037;HRun=0;HaplotypeScore=89.5952;InbreedingCoeff=0.8340;MQ=58.16;MQ0=2;MQRankSum=-5.763;QD=14.84;ReadPosRankSum=-1.383;VQSLOD=3.0097;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:96.31:0,96,2168	0/0:9,0:9:21.05:0,21,444	0/0:22,0:4:12.04:0,12,270	0/0:28,0:7:21.07:0,21,489	0/0:33,0:32:81.28:0,81,1886	1/1:4,10:7:11.36:265,11,0	1/1:5,2:2:5.98:98,6,0	1/1:6,4:4:6.02:134,6,0	0/0:32,0:31:87.30:0,87,1974	0/0:26,0:25:75.26:0,75,1737	0/0:26,0:25:63.22:0,63,1466	0/0:21,0:21:60.21:0,60,1355	0/0:20,0:20:60.21:0,60,1359	0/0:31,0:31:93.32:0,93,2166	0/0:37,0:36:99:0,108,2462	0/0:18,0:18:54.19:0,54,1258	0/0:28,0:28:78.25:0,78,1747	0/0:14,0:14:36.12:0,36,839	0/0:24,0:21:63.19:0,63,1411	0/0:21,0:21:48.16:0,48,1108	0/0:19,0:19:42.14:0,42,969	1/1:6,3:9:9.03:212,9,0	0/1:5,0:5:0:0,0,0	1/1:4,3:5:9.03:213,9,0	0/0:25,0:25:66.23:0,66,1538	0/0:29,0:29:84.26:0,84,1841	0/0:15,0:15:42.13:0,42,934	0/0:3,0:3:3.01:0,3,70
chr10	60326947	.	T	TG	816.45	PASS	AC=10;AF=0.192;AN=52;BaseQRankSum=-2.516;DP=492;FS=18.960;HRun=2;HaplotypeScore=98.9669;InbreedingCoeff=0.9184;MQ=61.11;MQ0=6;MQRankSum=-6.659;QD=15.70;ReadPosRankSum=-1.932;VQSLOD=2.0963;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:96.37:0,96,582	0/0:8,0:8:20.36:0,20,127	0/0:24,0:11:33.06:0,33,388	0/0:26,0:16:39.67:0,40,449	0/0:25,0:25:69.43:0,69,376	1/1:1,12:7:15.05:198,15,0	1/1:1,6:3:3.01:43,3,0	./.	0/0:23,0:23:58.05:0,58,329	0/0:25,0:24:45.63:0,46,298	0/0:13,0:13:29.05:0,29,168	0/0:10,0:10:29.13:0,29,172	0/0:10,0:10:23.16:0,23,126	0/0:23,0:22:51.98:0,52,299	0/0:18,0:18:37.57:0,38,208	0/0:19,0:19:46.41:0,46,266	0/0:33,0:33:87.15:0,87,493	0/0:8,0:8:20.31:0,20,115	0/0:13,0:10:20.43:0,20,131	0/0:22,0:22:55.14:0,55,307	0/0:18,0:18:52.17:0,52,290	1/1:1,17:12:30.10:430,30,0	1/1:2,4:5:6.02:86,6,0	1/1:1,7:7:15.05:215,15,0	0/0:22,0:22:43.99:0,44,352	0/0:29,0:28:55.03:0,55,361	0/0:28,0:28:79.12:0,79,456	./.
chr10	60329040	.	T	TA	2455.54	PASS	AC=36;AF=0.900;AN=40;BaseQRankSum=-3.679;DP=115;FS=25.629;HRun=6;HaplotypeScore=17.4718;InbreedingCoeff=0.5250;MQ=77.21;MQ0=11;MQRankSum=-0.509;QD=27.59;ReadPosRankSum=1.954;VQSLOD=1.4611;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,6:8:12.04:151,12,0	1/1:0,1:1:3.01:38,3,0	0/0:14,0:5:11.70:0,12,97	0/0:11,0:9:13.99:0,14,115	1/1:0,5:4:12.04:146,12,0	./.	./.	./.	1/1:0,3:3:9.03:113,9,0	1/1:0,4:4:12.03:140,12,0	1/1:0,2:2:6.02:71,6,0	1/1:0,2:2:6.02:75,6,0	1/1:0,4:4:9.03:113,9,0	1/1:1,1:1:3.01:38,3,0	./.	1/1:0,1:1:3.01:38,3,0	1/1:0,12:12:30.10:377,30,0	1/1:0,7:7:21.07:264,21,0	1/1:2,5:5:6.81:110,7,0	1/1:0,3:3:6.02:75,6,0	./.	./.	./.	./.	1/1:0,6:6:18.06:223,18,0	1/1:1,5:6:15.05:187,15,0	1/1:0,3:3:6.02:75,6,0	1/1:0,13:9:27.09:338,27,0
chr10	60332625	.	G	GAT	13252.77	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-13.627;DP=472;FS=2.777;HRun=0;HaplotypeScore=51.8827;InbreedingCoeff=0.9687;MQ=63.71;MQ0=26;MQRankSum=2.843;QD=40.16;ReadPosRankSum=2.462;VQSLOD=6.8211;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,10:10:24.08:425,24,0	1/1:0,5:5:12.04:213,12,0	0/0:23,0:5:12.02:0,12,135	0/0:19,0:6:11.39:0,11,129	1/1:2,19:20:48.16:834,48,0	0/0:21,0:21:39.13:0,39,535	0/0:9,0:9:18.06:0,18,247	0/0:32,0:28:78.20:0,78,992	1/1:2,15:17:33.11:585,33,0	1/1:2,13:16:42.14:725,42,0	1/1:1,16:17:39.13:676,39,0	1/1:2,12:13:36.12:638,36,0	1/1:3,16:19:48.16:851,48,0	1/1:3,18:20:48.16:828,48,0	1/1:0,20:20:39.13:691,39,0	1/1:0,6:6:12.04:213,12,0	1/1:0,15:15:36.12:638,36,0	1/1:1,5:5:12.04:212,12,0	1/1:1,18:17:51.17:887,51,0	1/1:3,20:23:42.11:682,42,0	1/1:0,18:17:45.15:792,45,0	0/0:13,0:12:36.12:0,36,494	0/0:17,0:17:45.13:0,45,600	0/0:8,0:8:24.08:0,24,330	1/1:0,31:32:78.27:1383,78,0	1/1:0,14:15:42.12:703,42,0	1/1:1,26:26:57.20:1010,57,0	1/1:4,5:9:15.05:266,15,0
chr10	60333092	.	G	GA	12962.40	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-5.241;DP=562;FS=3.708;HRun=9;HaplotypeScore=65.1026;InbreedingCoeff=0.9065;MQ=67.49;MQ0=3;MQRankSum=-2.039;QD=24.64;ReadPosRankSum=3.149;VQSLOD=5.8205;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,27:34:81.01:864,81,0	1/1:1,5:6:15.04:166,15,0	0/0:19,0:17:15.47:0,15,216	0/0:15,0:13:38.91:0,39,327	1/1:8,25:34:51.87:743,52,0	1/1:5,19:21:54.15:597,54,0	1/1:3,14:17:36.10:398,36,0	1/1:7,20:28:40.59:657,41,0	1/1:4,10:14:21.06:232,21,0	1/1:7,12:19:13.05:372,13,0	1/1:3,15:18:42.07:451,42,0	1/1:2,13:15:36.10:398,36,0	1/1:4,8:12:24.06:264,24,0	1/1:3,13:16:36.10:397,36,0	1/1:3,23:26:69.19:763,69,0	1/1:3,18:21:48.13:531,48,0	1/1:3,21:24:48.13:531,48,0	1/1:1,12:13:36.10:398,36,0	1/1:4,15:19:51.14:564,51,0	1/1:4,24:28:69.08:723,69,0	1/1:1,19:20:48.12:524,48,0	1/1:2,9:10:30:316,30,0	1/1:1,15:16:43:463,43,0	1/1:3,16:18:42.11:465,42,0	1/1:4,9:13:5.27:276,5,0	1/1:4,22:26:60.13:645,60,0	1/1:7,27:34:75.18:818,75,0	1/1:3,16:18:16.07:405,16,0
chr10	60333523	.	G	GTGTAATAGCACC	1763.57	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=2.348;DP=699;FS=19.724;HRun=0;HaplotypeScore=204.4058;InbreedingCoeff=0.8891;MQ=73.72;MQ0=34;MQRankSum=-5.860;QD=14.34;ReadPosRankSum=-2.964;VQSLOD=0.3042;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,157,5611	0/0:15,0:15:42.14:0,42,1567	0/0:36,0:36:94.84:0,95,2850	0/0:29,0:29:75.23:0,75,2398	0/0:34,0:34:99:0,99,3387	1/1:5,10:7:3.01:183,3,0	1/1:10,6:7:8.96:135,9,0	1/1:10,6:10:15.04:453,15,0	0/0:28,0:28:81.26:0,81,2865	0/0:29,0:30:84.29:0,84,3013	0/0:16,0:16:45.15:0,45,1582	0/0:16,0:16:48.15:0,48,1640	0/0:20,0:20:54.15:0,54,1772	0/0:15,0:15:39.13:0,39,1416	0/0:29,0:29:87.28:0,87,2970	0/0:27,0:27:81.28:0,81,3019	0/0:29,0:29:81.28:0,81,2932	0/0:18,0:18:51.18:0,51,1902	0/0:14,0:14:42.10:0,42,1370	0/0:35,0:35:99:0,105,3774	0/0:46,0:46:99:0,129,4628	1/1:5,20:11:12.04:718,12,0	1/1:9,11:12:8.99:386,9,0	1/1:10,4:8:3.01:51,3,0	0/0:21,0:21:60.21:0,60,2223	0/0:24,0:24:72.25:0,72,2568	0/0:29,0:29:81.24:0,81,2774	0/0:12,0:12:36.11:0,36,1255
chr10	60334209	.	GC	G	1111.30	PASS	AB=0.539;AC=1;AF=0.018;AN=56;BaseQRankSum=4.489;DP=694;FS=2.232;HRun=2;HaplotypeScore=110.5457;InbreedingCoeff=-0.0182;MQ=59.54;MQ0=2;MQRankSum=-3.160;QD=27.10;ReadPosRankSum=-4.093;VQSLOD=2.3438;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,105,1548	0/0:22,0:22:66.18:0,66,962	0/0:19,0:16:45.10:0,45,622	0/0:27,0:19:45.55:0,46,592	0/0:41,0:41:99:0,120,1778	0/0:24,0:23:54.18:0,54,809	0/0:16,0:16:42.14:0,42,624	0/1:6,35:40:65.49:1186,0,65	0/0:31,0:31:90.27:0,90,1307	0/0:25,0:25:75.25:0,75,1124	0/0:30,0:30:87.28:0,87,1283	0/0:20,0:20:60.20:0,60,899	0/0:20,0:20:60.20:0,60,896	0/0:13,0:13:39.13:0,39,584	0/0:28,0:28:84.26:0,84,1219	0/0:17,0:17:48.16:0,48,719	0/0:25,0:25:69.18:0,69,1009	0/0:10,0:10:30.07:0,30,425	0/0:21,0:21:60.19:0,60,880	0/0:38,0:38:99:0,114,1688	0/0:16,0:16:45.15:0,45,668	0/0:35,0:35:99:0,102,1495	0/0:15,0:15:45.15:0,45,674	0/0:24,0:24:69.22:0,69,1014	0/0:30,0:30:87.29:0,87,1299	0/0:23,0:23:69.23:0,69,1034	0/0:37,0:37:99:0,108,1598	0/0:9,0:9:27:0,27,335
chr10	60334745	.	TA	T	4802.41	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=17.294;DP=757;FS=0.354;HRun=2;HaplotypeScore=108.6340;InbreedingCoeff=0.9882;MQ=76.99;MQ0=0;MQRankSum=-9.174;QD=33.58;ReadPosRankSum=0.078;VQSLOD=4.3964;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,138,2041	0/0:11,0:11:33.11:0,33,494	0/0:22,0:21:60.18:0,60,877	0/0:19,0:19:54.13:0,54,738	0/0:24,0:24:72.24:0,72,1079	1/1:0,25:23:66.21:853,66,0	1/1:0,23:22:60.19:775,60,0	1/1:1,24:24:69.22:892,69,0	0/0:35,0:35:99:0,105,1574	0/0:30,0:30:90.30:0,90,1335	0/0:21,0:21:63.20:0,63,925	0/0:39,0:39:99:0,114,1691	0/0:29,0:29:87.27:0,87,1261	0/0:32,0:32:96.33:0,96,1439	0/0:44,0:44:99:0,132,1979	0/0:28,0:28:81.27:0,81,1212	0/0:17,0:17:48.16:0,48,719	0/0:26,0:26:78.26:0,78,1169	0/0:22,0:22:60.16:0,60,838	0/0:24,0:24:72.24:0,72,1078	0/0:54,0:54:99:0,163,2420	1/1:0,24:22:63.20:818,63,0	1/1:2,20:20:57.17:725,57,0	1/1:0,24:24:56.78:740,57,0	0/0:25,0:25:75.24:0,75,1087	0/0:27,0:27:81.27:0,81,1196	0/0:36,0:34:99:0,108,1591	0/0:3,0:3:9.03:0,9,135
chr10	60335186	.	C	CTTTT	3026.16	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=4.103;DP=548;FS=15.825;HRun=2;HaplotypeScore=134.7812;InbreedingCoeff=0.9861;MQ=53.56;MQ0=17;MQRankSum=-8.806;QD=34.78;ReadPosRankSum=-0.831;VQSLOD=-0.0993;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,138,2638	0/0:8,0:8:24.08:0,24,470	0/0:27,0:14:21.10:0,21,508	0/0:22,0:14:36.12:0,36,678	0/0:18,0:17:51.14:0,51,931	1/1:5,14:16:39.13:902,39,0	1/1:7,6:6:15.03:321,15,0	1/1:5,4:10:18.01:190,18,0	0/0:17,0:17:48.15:0,48,902	0/0:23,0:23:69.24:0,69,1347	0/0:10,0:10:30.10:0,30,586	0/0:15,0:15:45.10:0,45,827	0/0:9,0:8:24.08:0,24,471	0/0:19,0:19:57.18:0,57,1074	0/0:20,0:20:57.17:0,57,1045	0/0:22,0:22:66.23:0,66,1295	0/0:21,0:21:63.20:0,63,1192	0/0:17,0:17:51.17:0,51,985	0/0:25,0:21:63.15:0,63,1046	0/0:30,0:30:87.28:0,87,1662	0/0:44,0:44:99:0,123,2316	1/1:7,8:14:39.08:764,39,0	1/1:4,7:8:21.07:550,21,0	1/1:0,14:8:18.06:486,18,0	0/0:20,0:20:60.09:0,60,1060	0/0:20,0:19:57.18:0,57,1053	0/0:21,0:21:57.20:0,57,1108	0/0:5,0:5:13.29:0,13,238
chr10	60335187	.	TCA	T	703.09	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=7.874;DP=544;FS=13.552;HRun=0;HaplotypeScore=120.9615;InbreedingCoeff=0.9626;MQ=53.47;MQ0=17;MQRankSum=-9.578;QD=8.90;ReadPosRankSum=-0.549;VQSLOD=2.4839;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,138,1787	0/0:8,0:8:24.08:0,24,318	0/0:27,0:15:27.01:0,27,565	0/0:22,0:14:39.10:0,39,714	0/0:18,0:17:51.15:0,51,649	1/1:13,4:14:33.50:261,34,0	1/1:8,4:6:13.46:130,13,0	1/1:9,1:7:11.62:87,12,0	0/0:17,0:17:48.14:0,48,641	0/0:23,0:23:69.22:0,69,901	0/0:10,0:10:30.10:0,30,385	0/0:15,0:15:45.14:0,45,578	0/0:9,0:8:24.08:0,24,319	0/0:20,0:20:57.18:0,57,755	0/0:21,0:21:57.17:0,57,730	0/0:22,0:22:66.21:0,66,848	0/0:21,0:21:63.20:0,63,810	0/0:18,0:18:51.16:0,51,659	0/0:25,0:21:63.14:0,63,750	0/0:30,0:30:87.26:0,87,1089	0/0:44,0:44:99:0,123,1537	1/1:8,7:12:30.14:291,30,0	1/1:7,4:8:8.20:64,8,0	1/1:14,0:8:14.06:50,14,0	0/0:20,0:20:60.15:0,60,741	0/0:20,0:19:57.17:0,57,698	0/0:21,0:21:57.18:0,57,740	0/0:5,0:5:12.04:0,12,165
chr10	60335393	.	C	CTCTGTGTGTGTGTGTG	5878.13	PASS	AB=1.000;AC=51;AF=0.911;AN=56;BaseQRankSum=-2.775;DP=357;FS=14.156;HRun=0;HaplotypeScore=121.1322;InbreedingCoeff=0.3268;MQ=41.06;MQ0=20;MQRankSum=1.374;QD=17.71;ReadPosRankSum=1.322;VQSLOD=2.9122;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:37,0:34:59.95:647,60,0	1/1:6,0:5:11.98:99,12,0	0/0:12,0:1:2.90:0,3,16	0/0:13,0:1:3:0,3,25	1/1:20,0:15:9.56:117,10,0	1/1:3,0:3:2.96:19,3,0	1/1:10,0:7:3:25,3,0	1/1:7,0:7:20.81:148,21,0	1/1:14,0:11:20.53:191,21,0	1/1:21,0:19:51.01:1064,51,0	1/1:10,0:6:8.98:72,9,0	1/1:11,0:9:11.96:117,12,0	1/1:12,0:12:23.99:232,24,0	1/1:18,0:12:29.96:249,30,0	1/1:14,0:13:15.48:161,15,0	1/1:9,0:8:17.98:150,18,0	1/1:17,0:16:39.02:572,39,0	1/1:5,0:5:14.93:117,15,0	1/1:15,0:11:29.41:634,29,0	1/1:12,0:11:17.82:138,18,0	1/1:13,0:9:9.88:77,10,0	1/1:11,0:8:5.92:42,6,0	1/1:6,0:6:5.99:50,6,0	1/1:7,0:6:2.63:91,3,0	1/1:13,0:11:12.43:101,12,0	1/1:14,0:11:27.99:529,28,0	1/1:8,9:19:5.98:182,6,0	0/1:6,0:4:55.95:56,0,91
chr10	60335510	.	G	GGTAA	3440.33	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=8.514;DP=415;FS=16.859;HRun=0;HaplotypeScore=74.2105;InbreedingCoeff=0.9606;MQ=79.06;MQ0=0;MQRankSum=-7.488;QD=58.31;ReadPosRankSum=0.371;VQSLOD=3.9731;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,120,2411	0/0:14,0:14:42.14:0,42,845	0/0:11,0:11:27.06:0,27,476	0/0:16,0:16:32.50:0,33,710	0/0:17,0:17:48.12:0,48,917	1/1:0,8:8:24.08:653,24,0	1/1:1,5:7:12.04:334,12,0	1/1:1,9:10:27.09:749,27,0	0/0:10,0:9:27.09:0,27,546	0/0:17,0:17:51.17:0,51,1012	0/0:17,0:17:48.16:0,48,958	0/0:13,0:13:36.12:0,36,736	0/0:14,0:14:42.14:0,42,866	0/0:18,0:16:42.14:0,42,866	0/0:23,0:23:57.13:0,57,1131	0/0:11,0:11:27.08:0,27,520	0/0:30,0:30:90.27:0,90,1782	0/0:12,0:12:36.12:0,36,742	0/0:9,0:9:24.08:0,24,495	0/0:20,0:20:51.12:0,51,1039	0/0:16,0:15:45.15:0,45,914	1/1:0,13:11:30.10:771,30,0	1/1:2,10:11:27.09:707,27,0	1/1:0,7:8:9.92:225,10,0	0/0:15,0:15:42.14:0,42,865	0/0:11,0:10:30.10:0,30,613	0/0:18,0:17:51.16:0,51,1016	0/0:2,0:2:6.02:0,6,124
chr10	60336230	.	TG	T	4413.86	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=16.042;DP=660;FS=12.046;HRun=6;HaplotypeScore=89.2634;InbreedingCoeff=0.9982;MQ=72.10;MQ0=7;MQRankSum=-2.005;QD=33.69;ReadPosRankSum=1.106;VQSLOD=3.6538;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,126,1872	0/0:11,0:11:33.11:0,33,492	0/0:28,0:28:80.28:0,80,1115	0/0:23,0:23:65.15:0,65,792	0/0:32,0:32:96.32:0,96,1422	1/1:0,17:17:48.16:623,48,0	1/1:1,22:23:63.20:817,63,0	1/1:5,15:13:36.10:453,36,0	0/0:32,0:32:96.30:0,96,1398	0/0:33,0:33:99:0,99,1481	0/0:10,0:10:30.08:0,30,410	0/0:28,0:28:84.26:0,84,1213	0/0:15,0:15:45.14:0,45,645	0/0:30,0:30:90.30:0,90,1344	0/0:22,0:22:66.22:0,66,985	0/0:22,0:22:66.22:0,66,989	0/0:26,0:26:75.25:0,75,1111	0/0:7,0:7:18.06:0,18,270	0/0:24,0:24:63.21:0,63,940	0/0:27,0:27:78.26:0,78,1167	0/0:25,0:25:75.24:0,75,1098	1/1:0,19:19:51.17:661,51,0	1/1:0,22:22:66.21:854,66,0	1/1:1,29:30:72.61:1005,73,0	0/0:21,0:21:60.20:0,60,895	0/0:23,0:23:69.23:0,69,1030	0/0:29,0:29:87.29:0,87,1297	0/0:18,0:14:42.14:0,42,625
chr10	60336623	.	C	CAAAAAA	1360.33	PASS	AC=10;AF=0.185;AN=54;BaseQRankSum=7.163;DP=466;FS=12.583;HRun=0;HaplotypeScore=100.5592;InbreedingCoeff=0.8976;MQ=82.62;MQ0=1;MQRankSum=-6.184;QD=34.01;ReadPosRankSum=-2.249;VQSLOD=2.3401;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:96.30:0,96,2288	0/0:7,0:7:21.06:0,21,455	0/0:26,0:23:69.17:0,69,1417	0/0:24,0:20:44.51:0,45,1072	0/0:32,0:32:93.32:0,93,2224	1/1:4,5:9:24.08:685,24,0	1/1:2,1:2:5.97:55,6,0	1/1:3,3:2:2.49:6,2,0	0/0:18,0:18:51.18:0,51,1253	0/0:22,0:22:66.23:0,66,1626	0/0:12,0:12:36.12:0,36,890	0/0:13,0:13:39.11:0,39,921	0/0:14,0:14:42.14:0,42,1049	0/0:19,0:19:57.20:0,57,1403	0/0:14,0:14:42.14:0,42,1024	0/0:20,0:20:60.20:0,60,1405	0/0:24,0:24:72.22:0,72,1663	0/0:7,0:7:21.07:0,21,524	0/0:17,0:16:45.15:0,45,1009	0/0:33,0:33:99:0,99,2369	0/0:13,0:13:39.13:0,39,947	1/1:4,12:15:21.14:595,21,0	1/1:0,3:2:6.02:167,6,0	./.	0/0:11,0:11:33.11:0,33,816	0/0:29,0:29:87.29:0,87,2101	0/0:33,0:33:99:0,99,2216	0/0:5,0:5:15.05:0,15,375
chr10	60336663	.	C	CT	1669.62	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=4.767;DP=497;FS=32.179;HRun=4;HaplotypeScore=60.9675;InbreedingCoeff=0.9580;MQ=73.60;MQ0=4;MQRankSum=-10.216;QD=19.19;ReadPosRankSum=0.522;VQSLOD=1.7427;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:66.19:0,66,746	0/0:12,0:12:36.09:0,36,398	0/0:16,0:12:30.07:0,30,327	0/0:26,0:22:44.83:0,45,413	0/0:30,0:30:75.20:0,75,837	1/1:3,15:16:39.13:508,39,0	1/1:0,8:7:18.06:231,18,0	1/1:14,11:16:22.14:279,22,0	0/0:22,0:22:54.12:0,54,590	0/0:13,0:13:36.09:0,36,394	0/0:23,0:23:66.15:0,66,720	0/0:15,0:15:36.10:0,36,407	0/0:16,0:16:45.13:0,45,510	0/0:18,0:18:48.11:0,48,524	0/0:14,0:14:39.08:0,39,417	0/0:14,0:14:42.09:0,42,455	0/0:23,0:23:66.17:0,66,736	0/0:7,0:6:18.05:0,18,204	0/0:18,0:18:45.10:0,45,493	0/0:33,0:33:93.19:0,93,1003	0/0:9,0:9:24.07:0,24,271	1/1:1,12:10:24.08:310,24,0	1/1:4,17:17:39.12:485,39,0	1/1:2,0:1:3.01:37,3,0	0/0:15,0:15:45.11:0,45,500	0/0:28,0:28:75.21:0,75,850	0/0:26,0:26:75.20:0,75,839	0/0:8,0:8:21.01:0,21,222
chr10	60336694	.	CAAATGTT	C	838.96	PASS	AB=0.793;AC=4;AF=0.071;AN=56;BaseQRankSum=6.576;DP=466;FS=20.892;HRun=0;HaplotypeScore=93.8463;InbreedingCoeff=-0.0976;MQ=50.41;MQ0=51;MQRankSum=-4.368;QD=13.98;ReadPosRankSum=1.030;VQSLOD=0.8372;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:54.19:0,54,2162	0/0:13,0:12:36.12:0,36,1474	0/0:24,0:7:15.93:0,16,459	0/0:20,0:9:1.60:0,2,133	0/0:27,0:26:66.18:0,66,2454	0/1:12,6:11:99:451,0,481	0/1:8,1:4:71.77:72,0,178	0/0:18,0:10:20.87:0,21,818	0/0:18,0:18:42.13:0,42,1542	0/0:14,0:14:42.14:0,42,1651	0/0:24,0:22:60.16:0,60,2288	0/0:11,0:11:30.09:0,30,1079	0/0:14,0:13:36.12:0,36,1472	0/0:10,0:10:27.09:0,27,1028	0/0:18,0:18:48.16:0,48,1805	0/0:14,0:14:42.14:0,42,1537	0/0:23,0:22:57.20:0,57,2290	0/0:7,0:4:9.03:0,9,287	0/0:20,0:18:48.16:0,48,1934	0/0:27,0:25:66.23:0,66,2534	0/0:10,0:7:12:0,12,292	0/1:8,5:9:99:143,0,319	0/1:15,5:16:99:282,0,915	0/0:6,0:1:3.01:0,3,123	0/0:17,0:17:48.08:0,48,1807	0/0:20,0:20:60.21:0,60,2363	0/0:25,0:25:66.19:0,66,2456	0/0:6,0:5:15.02:0,15,513
chr10	60337211	.	GA	G	1636.14	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=0.563;DP=483;FS=4.179;HRun=5;HaplotypeScore=65.9598;InbreedingCoeff=0.9904;MQ=53.73;MQ0=14;MQRankSum=-1.236;QD=18.38;ReadPosRankSum=1.378;VQSLOD=3.2816;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:66.18:0,66,881	0/0:7,0:7:21.07:0,21,287	0/0:20,0:11:33.10:0,33,434	0/0:19,0:17:39.11:0,39,519	0/0:27,0:27:78.23:0,78,1033	1/1:0,14:11:27.08:306,27,0	1/1:1,5:4:12.03:136,12,0	1/1:1,22:11:30.05:327,30,0	0/0:12,0:12:36.11:0,36,478	0/0:23,0:23:69.22:0,69,917	0/0:29,0:29:87.27:0,87,1168	0/0:12,0:12:36.11:0,36,478	0/0:14,0:14:39.11:0,39,530	0/0:6,0:6:18.05:0,18,230	0/0:17,0:17:51.17:0,51,697	0/0:12,0:12:33.11:0,33,451	0/0:24,0:23:66.22:0,66,902	0/0:17,0:17:51.15:0,51,679	0/0:23,0:19:57.17:0,57,746	0/0:27,0:27:81.26:0,81,1092	0/0:12,0:12:36.12:0,36,488	1/1:0,17:10:27.08:306,27,0	1/1:0,18:13:36.10:408,36,0	1/1:0,11:10:30.09:340,30,0	0/0:14,0:14:39.13:0,39,533	0/0:16,0:16:45.15:0,45,616	0/0:21,0:21:60.20:0,60,817	0/0:19,0:19:57.19:0,57,778
chr10	60338063	.	CT	C	2313.91	PASS	AB=1.000;AC=42;AF=0.750;AN=56;BaseQRankSum=3.373;DP=369;FS=19.943;HRun=11;HaplotypeScore=84.5293;InbreedingCoeff=0.0278;MQ=68.03;MQ0=7;MQRankSum=-1.522;QD=6.69;ReadPosRankSum=6.143;VQSLOD=0.3244;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:26:16.12:137,0,16	1/1:2,0:2:5.05:19,5,0	0/0:9,0:6:14.70:0,15,117	0/0:13,0:9:11.91:0,12,95	0/1:30,0:29:40.59:123,0,41	1/1:2,4:5:8.99:74,9,0	1/1:0,4:4:8.99:74,9,0	1/1:3,10:10:29.97:246,30,0	1/1:6,0:6:10.76:47,11,0	0/1:27,0:27:4.55:131,0,5	0/1:22,0:22:10.29:134,0,10	0/1:7,0:7:8.94:35,0,9	1/1:5,0:5:10.62:53,11,0	1/1:9,0:9:10.53:41,11,0	0/1:6,0:6:13.38:13,0,15	1/1:9,0:9:18.30:71,18,0	1/1:21,0:21:25.84:154,26,0	0/1:12,0:11:1.48:57,0,1	0/1:18,0:18:56.69:57,0,67	1/1:18,0:18:47.09:183,47,0	1/1:13,0:13:6.47:87,6,0	1/1:0,3:3:8.99:74,9,0	1/1:3,8:12:23.33:162,23,0	1/1:2,1:3:2.99:25,3,0	0/1:17,0:17:13.03:84,0,13	1/1:20,0:20:18.16:111,18,0	1/1:26,0:26:37.17:211,37,0	0/1:11,0:11:9.12:72,0,9
chr10	60338074	.	TA	T	8085.33	PASS	AB=1.000;AC=43;AF=0.768;AN=56;BaseQRankSum=-8.624;DP=350;FS=28.910;HRun=4;HaplotypeScore=62.3956;InbreedingCoeff=0.6008;MQ=66.95;MQ0=2;MQRankSum=0.907;QD=26.77;ReadPosRankSum=4.993;VQSLOD=2.9523;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,19:21:45.07:515,45,0	1/1:0,2:2:6.02:72,6,0	0/0:12,0:7:13.28:0,13,102	0/1:11,0:8:24.41:24,0,32	1/1:3,23:25:59.92:628,60,0	0/1:5,0:4:4.04:4,0,13	0/0:6,0:6:1.57:0,2,34	0/0:19,0:19:26.12:0,26,208	1/1:0,5:5:12.04:142,12,0	1/1:7,22:29:77.88:891,78,0	1/1:1,20:21:45.13:524,45,0	1/1:0,7:7:15.05:179,15,0	1/1:0,4:4:12.03:135,12,0	1/1:0,6:6:12.04:143,12,0	1/1:2,4:6:6.02:72,6,0	1/1:0,8:8:21.06:251,21,0	1/1:0,18:18:51.07:589,51,0	1/1:2,9:11:24.02:269,24,0	1/1:6,11:16:37.45:434,37,0	1/1:0,19:19:57.11:661,57,0	1/1:0,11:11:30.09:358,30,0	0/1:3,0:3:1.06:1,0,1	0/0:9,0:9:0.95:0,1,13	0/0:2,0:2:3.56:0,4,13	1/1:1,13:14:36.11:429,36,0	1/1:5,16:21:60.02:655,60,0	1/1:1,25:26:66.20:787,66,0	1/1:0,9:9:27.08:321,27,0
chr10	60338620	.	A	AATGCTGTAC	12164.61	PASS	AC=42;AF=0.875;AN=48;BaseQRankSum=-5.186;DP=262;FS=0.894;HRun=0;HaplotypeScore=41.3568;InbreedingCoeff=0.5517;MQ=50.71;MQ0=4;MQRankSum=-6.321;QD=57.38;ReadPosRankSum=2.405;VQSLOD=4.4852;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,12:15:15.05:732,15,0	./.	0/0:17,0:16:42.14:0,42,1261	0/0:14,0:12:30.10:0,30,897	1/1:0,13:21:12.04:584,12,0	1/1:3,5:5:6.02:290,6,0	1/1:2,2:2:2.96:19,3,0	1/1:2,3:7:18.03:663,18,0	1/1:1,4:10:12.04:586,12,0	1/1:1,12:18:48.16:2134,48,0	1/1:1,4:9:12.04:579,12,0	1/1:2,5:6:9.03:439,9,0	./.	1/1:0,10:11:21.07:1024,21,0	1/1:0,7:10:9.03:439,9,0	1/1:2,3:5:6.02:293,6,0	1/1:1,3:5:9.03:437,9,0	1/1:0,2:3:3.01:147,3,0	1/1:1,4:8:24.06:887,24,0	1/1:4,6:15:15.05:681,15,0	./.	./.	1/1:0,4:3:6.02:232,6,0	0/0:2,0:1:0:0,0,0	1/1:1,8:12:9.03:439,9,0	1/1:0,5:9:27.09:1121,27,0	1/1:0,9:14:6.02:293,6,0	1/1:0,3:2:3.01:147,3,0
chr10	60340348	.	TA	T	8894.97	PASS	AB=0.980;AC=52;AF=0.963;AN=54;BaseQRankSum=0.196;DP=454;FS=4.025;HRun=2;HaplotypeScore=42.3641;InbreedingCoeff=0.1530;MQ=40.52;MQ0=32;MQRankSum=1.670;QD=19.59;ReadPosRankSum=3.472;VQSLOD=4.9927;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,12:12:33.11:426,33,0	1/1:0,4:4:6.02:78,6,0	0/1:48,1:6:18.22:18,0,159	0/1:47,1:12:2.01:2,0,327	1/1:0,36:33:66.17:835,66,0	1/1:2,9:7:2.94:18,3,0	1/1:1,1:1:3.01:39,3,0	./.	1/1:0,20:20:51.17:658,51,0	1/1:0,20:14:39.13:505,39,0	1/1:0,17:17:39.04:466,39,0	1/1:0,16:12:27.09:348,27,0	1/1:0,15:12:21.04:271,21,0	1/1:0,14:14:33.11:426,33,0	1/1:0,12:10:27.09:349,27,0	1/1:0,12:10:18.06:232,18,0	1/1:2,11:12:27.09:349,27,0	1/1:1,8:7:15.05:194,15,0	1/1:2,7:6:15.05:194,15,0	1/1:2,17:18:36.12:465,36,0	1/1:2,12:12:24.08:310,24,0	1/1:0,8:8:15.05:194,15,0	1/1:1,5:6:9.03:116,9,0	1/1:0,3:3:3.01:39,3,0	1/1:0,23:21:48.15:620,48,0	1/1:1,22:21:54.17:698,54,0	1/1:0,25:24:45.15:580,45,0	1/1:0,14:14:36.12:467,36,0
chr10	60343033	.	TG	T	444.65	PASS	AC=8;AF=0.154;AN=52;BaseQRankSum=5.682;DP=633;FS=3.901;HRun=1;HaplotypeScore=49.6181;InbreedingCoeff=0.8761;MQ=43.92;MQ0=111;MQRankSum=-5.148;QD=8.23;ReadPosRankSum=-0.242;VQSLOD=0.7819;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:32:71.01:0,71,1030	0/0:15,0:15:45.15:0,45,685	0/0:7,0:3:9.03:0,9,138	0/0:8,0:3:6.02:0,6,92	0/0:36,0:34:81.21:0,81,1192	1/1:4,9:4:9.03:125,9,0	./.	1/1:11,9:7:15.05:209,15,0	0/0:22,0:15:36.12:0,36,547	0/0:39,0:19:57.19:0,57,868	0/0:27,0:25:57.04:0,57,801	0/0:22,0:17:45.03:0,45,612	0/0:24,0:13:29.61:0,30,435	0/0:18,0:13:30.07:0,30,429	0/0:32,0:21:51.13:0,51,731	0/0:15,0:12:30.09:0,30,430	0/0:40,0:38:81.17:0,81,1206	0/0:14,0:14:30.01:0,30,406	0/0:18,0:12:36.11:0,36,530	0/0:47,0:33:75.25:0,75,1134	0/0:42,0:30:81.10:0,81,1145	1/1:2,7:4:3.01:42,3,0	1/1:1,11:7:15.05:209,15,0	./.	0/0:20,0:16:33.06:0,33,474	0/0:37,0:22:66.10:0,66,909	0/0:26,0:14:30.93:0,31,433	0/0:23,0:18:45.15:0,45,687
chr10	60343588	.	A	ATCT	1473.45	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=2.663;DP=489;FS=17.239;HRun=0;HaplotypeScore=72.1130;InbreedingCoeff=0.8421;MQ=41.79;MQ0=37;MQRankSum=-8.059;QD=27.80;ReadPosRankSum=-3.026;VQSLOD=1.1477;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:27:57.19:0,57,942	0/0:10,0:9:27.09:0,27,449	0/0:22,0:1:3.01:0,3,40	0/0:10,0:1:3.01:0,3,50	0/0:19,0:16:30.02:0,30,483	1/1:3,6:6:15.05:339,15,0	1/1:1,2:3:9.03:203,9,0	1/1:13,5:14:30.10:625,30,0	0/0:27,0:20:45.15:0,45,749	0/0:22,0:17:48.16:0,48,800	0/0:14,0:14:33.11:0,33,549	0/0:11,0:5:15.05:0,15,250	0/0:15,0:12:33.11:0,33,548	0/0:9,0:7:18.06:0,18,300	0/0:20,0:17:27.09:0,27,449	0/0:15,0:12:27.09:0,27,449	0/0:45,0:30:48.16:0,48,799	0/0:20,0:13:24.08:0,24,378	0/0:23,0:11:33.07:0,33,519	0/0:20,0:18:48.16:0,48,780	0/0:15,0:9:15.05:0,15,250	1/1:1,8:4:6.02:135,6,0	1/1:1,11:9:12.04:271,12,0	1/1:0,2:2:3.01:68,3,0	0/0:12,0:11:33.11:0,33,550	0/0:25,0:23:69.24:0,69,1150	0/0:35,0:32:81.28:0,81,1325	0/0:12,0:12:30.10:0,30,500
chr10	60343614	.	ATG	A	1101.81	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=3.351;DP=444;FS=1.561;HRun=0;HaplotypeScore=83.2037;InbreedingCoeff=0.9001;MQ=55.18;MQ0=8;MQRankSum=-7.629;QD=21.60;ReadPosRankSum=-1.616;VQSLOD=3.7565;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:26:63.25:0,63,337	0/0:10,0:9:20.13:0,20,107	0/0:22,0:11:33.10:0,33,556	0/0:6,0:3:9.02:0,9,135	0/0:20,0:19:48.49:0,48,256	1/1:0,8:8:12.04:181,12,0	1/1:1,5:5:9.03:136,9,0	1/1:5,15:16:42.09:592,42,0	0/0:23,0:19:43.19:0,43,232	0/0:20,0:19:54.87:0,55,314	0/0:12,0:12:31.59:0,32,167	0/0:8,0:7:20.19:0,20,109	0/0:13,0:13:34.22:0,34,179	0/0:7,0:6:14.38:0,14,76	0/0:19,0:17:34.50:0,35,184	0/0:13,0:12:31.63:0,32,165	0/0:31,0:29:63.66:0,64,362	0/0:14,0:12:28.75:0,29,152	0/0:18,0:16:46.25:0,46,260	0/0:21,0:21:57.64:0,58,333	0/0:12,0:11:23.02:0,23,125	1/1:1,5:2:6.02:90,6,0	1/1:3,7:8:14.94:226,15,0	1/1:0,1:1:3.01:45,3,0	0/0:16,0:16:43.05:0,43,229	0/0:29,0:29:81.37:0,81,522	0/0:32,0:31:86.62:0,87,477	0/0:18,0:18:51.67:0,52,275
chr10	60343616	.	GT	G	7768.45	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-0.549;DP=427;FS=3.777;HRun=9;HaplotypeScore=54.2206;InbreedingCoeff=0.7329;MQ=56.00;MQ0=7;MQRankSum=-2.649;QD=19.42;ReadPosRankSum=3.323;VQSLOD=5.2200;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,25:26:66.04:604,66,0	1/1:1,8:8:21.01:192,21,0	0/0:21,0:11:33.08:0,33,358	0/0:6,0:3:9.03:0,9,112	1/1:1,16:17:45.02:412,45,0	1/1:9,0:8:6.22:17,6,0	1/1:6,0:5:4.66:12,5,0	1/1:18,0:14:19.43:53,19,0	1/1:4,17:18:41.78:384,42,0	1/1:2,18:19:53.98:486,54,0	1/1:0,12:12:32.98:295,33,0	1/1:2,6:7:17.97:157,18,0	1/1:1,12:13:33.02:301,33,0	1/1:1,6:6:15.01:137,15,0	1/1:1,16:16:36.02:329,36,0	1/1:1,12:12:33.02:302,33,0	1/1:6,25:30:54.02:494,54,0	1/1:2,11:13:29.71:274,30,0	1/1:2,14:16:45:406,45,0	1/1:1,20:21:57.02:522,57,0	1/1:1,11:12:21:192,21,0	1/1:6,0:2:3.93:12,4,0	1/1:8,0:6:7.75:21,8,0	1/1:1,0:1:1.55:4,2,0	1/1:1,15:16:42.02:384,42,0	1/1:5,22:27:65.99:598,66,0	1/1:4,27:31:75.04:686,75,0	1/1:0,19:19:54.03:494,54,0
chr10	60343791	.	C	CT	326.09	PASS	AB=0.600;AC=9;AF=0.167;AN=54;BaseQRankSum=4.232;DP=440;FS=9.594;HRun=6;HaplotypeScore=75.9733;InbreedingCoeff=0.8783;MQ=65.64;MQ0=3;MQRankSum=-4.941;QD=10.52;ReadPosRankSum=-2.330;VQSLOD=0.6053;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,102,1039	0/0:5,0:5:11.98:0,12,112	0/0:30,0:18:37.19:0,37,351	0/0:30,0:17:23.71:0,24,191	0/0:24,0:24:57.12:0,57,579	1/1:1,4:4:9.03:113,9,0	1/1:2,3:3:5.98:57,6,0	1/1:7,5:12:18.03:210,18,0	0/0:11,0:11:27.06:0,27,275	0/0:20,0:20:42.08:0,42,424	0/0:18,0:18:39.06:0,39,389	0/0:14,0:14:39.03:0,39,398	0/0:14,0:14:36.02:0,36,349	0/0:13,0:13:36.08:0,36,367	0/0:16,1:17:31.23:0,31,470	0/0:14,0:14:36.08:0,36,367	0/0:28,0:28:78.16:0,78,789	0/0:13,1:13:33.07:0,33,334	0/0:15,0:12:18.03:0,18,183	0/0:19,0:19:51.11:0,51,519	0/0:26,0:26:72.16:0,72,734	./.	0/1:1,2:1:0:0,0,0	1/1:2,4:4:9.09:86,9,0	0/0:13,0:13:36.03:0,36,349	0/0:17,0:17:39.09:0,39,398	0/0:23,0:23:63.14:0,63,642	0/0:5,0:5:15.03:0,15,153
chr10	60349353	.	C	CT	1468.25	PASS	AB=0.533;AC=23;AF=0.676;AN=34;BaseQRankSum=-1.046;DP=108;FS=29.080;HRun=4;HaplotypeScore=19.8225;InbreedingCoeff=0.6021;MQ=23.48;MQ0=27;MQRankSum=-1.113;QD=26.70;ReadPosRankSum=0.912;VQSLOD=1.3437;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:6,0:3:9.03:0,9,102	0/0:10,0:5:15.04:0,15,170	1/1:3,5:6:12.04:163,12,0	0/0:6,0:3:9.03:0,9,102	./.	./.	./.	1/1:1,5:6:15.05:205,15,0	1/1:0,1:1:3.01:41,3,0	1/1:0,2:2:6.02:82,6,0	1/1:2,7:7:18.06:245,18,0	1/1:1,3:4:8.92:79,9,0	1/1:2,5:6:18.01:223,18,0	1/1:0,3:2:5.97:60,6,0	./.	./.	./.	./.	./.	0/0:5,0:3:6.01:0,6,65	0/0:7,0:3:9.03:0,9,102	./.	1/1:1,1:1:3.01:41,3,0	1/1:0,2:2:6.02:82,6,0	0/1:1,7:8:9.89:262,0,10	1/1:0,3:3:9.03:123,9,0
chr10	60353929	.	A	ACT	5705.76	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-11.778;DP=549;FS=5.179;HRun=0;HaplotypeScore=69.8833;InbreedingCoeff=0.9974;MQ=84.85;MQ0=0;MQRankSum=-3.065;QD=48.77;ReadPosRankSum=-1.440;VQSLOD=5.3926;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:75.23:0,75,1184	0/0:9,0:9:24.08:0,24,391	0/0:17,0:17:34.17:0,34,740	0/0:22,0:22:57.19:0,57,910	0/0:24,0:24:63.17:0,63,976	1/1:2,19:22:48.16:969,48,0	1/1:1,17:18:42.14:852,42,0	1/1:0,25:26:78.25:1515,78,0	0/0:26,0:26:69.24:0,69,1119	0/0:26,0:26:78.23:0,78,1220	0/0:19,0:19:51.17:0,51,831	0/0:15,0:15:45.15:0,45,722	0/0:6,0:6:18.06:0,18,293	0/0:14,0:14:42.13:0,42,660	0/0:20,0:20:57.19:0,57,913	0/0:11,0:11:33.11:0,33,538	0/0:13,0:13:30.10:0,30,489	0/0:12,0:12:33.11:0,33,538	0/0:29,0:29:87.28:0,87,1393	0/0:17,0:17:51.16:0,51,807	0/0:35,0:35:99:0,105,1712	1/1:1,19:25:54.19:1092,54,0	1/1:0,10:12:27.09:547,27,0	1/1:0,14:14:36.12:731,36,0	0/0:13,0:13:39.13:0,39,635	0/0:38,0:38:99:0,102,1641	0/0:20,0:20:60.19:0,60,953	0/0:18,0:18:54.18:0,54,880
chr10	60354767	.	T	TC	6616.69	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-1.207;DP=697;FS=7.112;HRun=1;HaplotypeScore=68.7475;InbreedingCoeff=0.9991;MQ=98.93;MQ0=0;MQRankSum=-6.532;QD=41.35;ReadPosRankSum=-0.389;VQSLOD=5.0039;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:81.25:0,81,1037	0/0:10,0:10:30.10:0,30,389	0/0:35,0:34:90.25:0,90,1112	0/0:39,0:39:99:0,114,1432	0/0:31,0:31:87.28:0,87,1129	1/1:1,31:32:84.28:1259,84,0	1/1:0,7:7:21.07:315,21,0	1/1:0,32:31:96.27:1358,96,0	0/0:27,0:27:78.21:0,78,970	0/0:31,0:31:90.29:0,90,1167	0/0:16,0:16:48.16:0,48,623	0/0:20,0:20:60.18:0,60,765	0/0:16,0:16:48.16:0,48,623	0/0:16,0:16:48.16:0,48,623	0/0:24,0:24:63.19:0,63,805	0/0:19,0:19:57.16:0,57,713	0/0:23,0:23:63.16:0,63,786	0/0:15,0:15:39.08:0,39,487	0/0:19,0:19:57.18:0,57,726	0/0:50,0:50:99:0,147,1869	0/0:22,0:21:63.20:0,63,818	1/1:0,31:31:87.29:1302,87,0	1/1:1,31:32:87.77:1304,88,0	1/1:0,26:26:72.24:1079,72,0	0/0:17,0:17:47.88:0,48,585	0/0:26,0:26:78.22:0,78,964	0/0:33,0:32:99:0,99,1283	0/0:21,0:21:63.20:0,63,816
chr10	60356193	.	G	GT	6175.08	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=16.285;DP=663;FS=6.319;HRun=0;HaplotypeScore=80.6262;InbreedingCoeff=0.9851;MQ=83.52;MQ0=0;MQRankSum=-4.550;QD=43.79;ReadPosRankSum=1.068;VQSLOD=5.1536;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,138,1860	0/0:13,0:13:39.13:0,39,542	0/0:20,0:20:60.04:0,60,756	0/0:19,0:19:54.09:0,54,664	0/0:30,0:30:87.29:0,87,1214	1/1:1,32:33:93.32:1486,93,0	1/1:1,29:30:81.27:1276,81,0	1/1:5,21:26:69.23:1094,69,0	0/0:33,0:33:99:0,99,1382	0/0:28,0:28:84.26:0,84,1133	0/0:23,0:23:66.22:0,66,923	0/0:19,0:19:57.19:0,57,797	0/0:17,0:17:51.17:0,51,713	0/0:28,0:28:84.27:0,84,1153	0/0:18,0:18:51.16:0,51,696	0/0:21,0:21:63.21:0,63,880	0/0:20,0:20:60.20:0,60,837	0/0:3,0:3:9.03:0,9,125	0/0:31,0:31:84.27:0,84,1159	0/0:27,0:27:78.23:0,78,1057	0/0:27,0:27:78.22:0,78,1053	1/1:2,19:21:57.13:881,57,0	1/1:0,26:26:75.02:1198,75,0	1/1:0,5:5:15.05:240,15,0	0/0:28,0:28:78.22:0,78,1069	0/0:22,0:22:66.22:0,66,923	0/0:23,0:23:69.23:0,69,963	0/0:26,0:26:78.26:0,78,1082
chr10	60357030	.	AG	A	2842.09	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=10.686;DP=638;FS=1.866;HRun=6;HaplotypeScore=63.6682;InbreedingCoeff=0.9998;MQ=80.57;MQ0=0;MQRankSum=-0.594;QD=20.30;ReadPosRankSum=1.885;VQSLOD=3.1825;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,105,1346	0/0:16,0:16:48.12:0,48,588	0/0:18,0:18:36.10:0,36,452	0/0:19,0:17:39.11:0,39,491	0/0:25,0:25:69.22:0,69,905	1/1:2,19:21:42.11:451,42,0	1/1:6,26:32:53.89:580,54,0	1/1:6,15:21:42.07:434,42,0	0/0:31,0:31:87.26:0,87,1114	0/0:29,0:30:84.18:0,84,1044	0/0:23,0:23:63.19:0,63,814	0/0:25,0:25:72.20:0,72,905	0/0:18,0:18:54.15:0,54,682	0/0:17,0:17:51.15:0,51,652	0/0:24,0:24:69.22:0,69,895	0/0:16,0:16:48.10:0,48,597	0/0:36,0:35:99:0,102,1321	0/0:16,0:16:39.11:0,39,499	0/0:22,0:22:60.17:0,60,761	0/0:23,0:23:60.15:0,60,734	0/0:33,0:33:93.29:0,93,1206	1/1:1,21:22:60.15:644,60,0	1/1:2,16:18:36.04:374,36,0	1/1:4,22:26:51.12:548,51,0	0/0:17,0:17:48.16:0,48,631	0/0:19,0:19:54.16:0,54,686	0/0:19,0:18:54.17:0,54,701	0/0:11,0:11:33.11:0,33,434
chr10	60357674	.	G	GTTC	7446.44	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-12.320;DP=708;FS=2.162;HRun=0;HaplotypeScore=96.3430;InbreedingCoeff=0.9997;MQ=94.18;MQ0=0;MQRankSum=-3.067;QD=49.31;ReadPosRankSum=0.170;VQSLOD=7.0450;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,120,1915	0/0:14,0:14:39.10:0,39,569	0/0:41,0:41:90.21:0,90,1298	0/0:28,0:28:76.07:0,76,1117	0/0:20,0:20:51.17:0,51,819	1/1:3,23:27:51.17:1097,51,0	1/1:0,18:18:45.15:990,45,0	1/1:3,21:24:66.23:1410,66,0	0/0:34,0:34:99:0,102,1592	0/0:30,0:30:87.30:0,87,1398	0/0:27,0:27:81.26:0,81,1255	0/0:17,0:17:45.15:0,45,723	0/0:28,0:28:81.26:0,81,1271	0/0:24,0:24:69.22:0,69,1079	0/0:24,0:24:63.19:0,63,961	0/0:25,0:25:72.25:0,72,1157	0/0:25,0:25:75.21:0,75,1137	0/0:12,0:12:36.12:0,36,578	0/0:19,0:19:54.18:0,54,840	0/0:32,0:32:87.25:0,87,1325	0/0:38,0:38:99:0,105,1632	1/1:3,19:24:51.09:1054,51,0	1/1:0,29:29:78.26:1630,78,0	1/1:2,25:29:59.95:1265,60,0	0/0:18,0:18:51.17:0,51,813	0/0:31,0:31:81.28:0,81,1295	0/0:16,0:16:42.14:0,42,665	0/0:11,0:10:27.09:0,27,434
chr10	60359655	.	A	AG	127.14	PASS	AB=0.851;AC=2;AF=0.036;AN=56;BaseQRankSum=5.632;DP=547;FS=0.000;HRun=0;HaplotypeScore=58.3780;InbreedingCoeff=-0.0378;MQ=84.84;MQ0=0;MQRankSum=4.456;QD=2.71;ReadPosRankSum=-3.122;VQSLOD=1.2107;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,123,1706	0/0:11,0:11:30.10:0,30,420	0/1:11,5:16:99:166,0,374	0/1:29,2:31:49.95:50,0,908	0/0:21,0:21:63.21:0,63,881	0/0:29,0:29:87.29:0,87,1217	0/0:11,0:11:33.09:0,33,443	0/0:26,0:26:78.25:0,78,1075	0/0:9,0:9:27.09:0,27,378	0/0:17,0:17:48.16:0,48,672	0/0:22,0:22:66.22:0,66,921	0/0:11,0:11:30.10:0,30,420	0/0:17,0:17:51.17:0,51,713	0/0:16,0:16:45.15:0,45,630	0/0:15,0:15:45.15:0,45,630	0/0:7,0:7:21.07:0,21,294	0/0:11,0:11:33.11:0,33,461	0/0:7,0:8:15.77:0,16,261	0/0:16,0:16:48.15:0,48,656	0/0:30,0:30:90.30:0,90,1258	0/0:31,0:31:93.29:0,93,1280	0/0:14,0:14:42.14:0,42,585	0/0:18,0:18:54.18:0,54,755	0/0:21,0:21:63.16:0,63,842	0/0:20,0:20:57.19:0,57,797	0/0:21,0:21:60.19:0,60,824	0/0:37,0:36:99:0,111,1512	0/0:20,0:20:54:0,54,754
chr10	60359991	.	CT	C	2657.08	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=14.428;DP=536;FS=8.546;HRun=2;HaplotypeScore=60.5520;InbreedingCoeff=0.9963;MQ=74.71;MQ0=0;MQRankSum=-0.721;QD=23.31;ReadPosRankSum=0.590;VQSLOD=2.6695;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:96.74:0,97,1394	0/0:9,0:9:27.09:0,27,405	0/0:18,0:18:54.03:0,54,713	0/0:9,0:10:30.04:0,30,380	0/0:19,0:19:57.17:0,57,815	1/1:1,24:25:65.07:669,65,0	1/1:0,22:22:57.09:552,57,0	1/1:4,17:21:51.53:490,52,0	0/0:18,0:18:54.18:0,54,800	0/0:26,0:26:78.26:0,78,1168	0/0:32,0:32:96.31:0,96,1417	0/0:15,0:15:45.15:0,45,674	0/0:12,0:12:36.11:0,36,517	0/0:18,0:18:54.18:0,54,806	0/0:16,0:16:45.15:0,45,674	0/0:17,0:17:51.15:0,51,723	0/0:17,0:17:51.17:0,51,763	0/0:5,0:5:15.05:0,15,225	0/0:22,0:22:66.22:0,66,984	0/0:22,0:22:66.21:0,66,962	0/0:21,0:21:63.21:0,63,939	1/1:0,11:11:28.90:282,29,0	1/1:3,18:21:49.76:482,50,0	1/1:2,12:14:35.90:370,36,0	0/0:14,0:14:42.14:0,42,629	0/0:22,0:22:66.22:0,66,989	0/0:37,0:37:99:0,111,1648	0/0:19,0:19:57.19:0,57,834
chr10	60361938	.	C	CA	2659.45	PASS	AB=0.720;AC=37;AF=0.841;AN=44;BaseQRankSum=-2.497;DP=229;FS=9.187;HRun=2;HaplotypeScore=38.5777;InbreedingCoeff=0.3910;MQ=72.08;MQ0=1;MQRankSum=1.025;QD=13.04;ReadPosRankSum=0.849;VQSLOD=1.5762;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,0:8:11.90:100,12,0	1/1:3,0:3:9:80,9,0	0/1:12,0:5:9.76:10,0,26	0/0:12,0:8:9.17:0,9,104	1/1:3,13:16:29.70:263,30,0	./.	./.	./.	1/1:10,0:10:3.01:33,3,0	1/1:13,2:15:32.91:290,33,0	1/1:14,0:14:31.98:258,32,0	1/1:7,1:8:15.90:141,16,0	1/1:1,3:4:3.01:42,3,0	1/1:5,1:6:14.91:119,15,0	0/1:3,7:10:15.01:24,0,15	0/1:2,6:8:0:0,0,0	0/0:3,7:11:3.82:0,4,11	1/1:5,0:5:8.80:57,9,0	1/1:14,0:14:25.92:211,26,0	1/1:9,1:10:23.84:188,24,0	1/1:12,0:12:22.97:205,23,0	./.	./.	./.	1/1:4,8:12:7.59:35,8,0	1/1:3,8:11:23.89:184,24,0	1/1:21,0:20:59.75:502,60,0	1/1:4,1:5:5.88:37,6,0
chr10	60361940	.	A	AAC	2459.07	PASS	AB=0.983;AC=33;AF=0.786;AN=42;BaseQRankSum=-5.362;DP=230;FS=51.647;HRun=0;HaplotypeScore=43.4545;InbreedingCoeff=0.2427;MQ=72.12;MQ0=0;MQRankSum=0.163;QD=12.36;ReadPosRankSum=4.072;VQSLOD=1.4774;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,0:9:14.93:119,15,0	1/1:3,0:3:9:80,9,0	0/1:12,0:5:7.13:7,0,26	0/0:11,0:8:15.78:0,16,124	1/1:14,1:17:29.83:256,30,0	./.	./.	./.	1/1:1,8:12:5.96:52,6,0	1/1:14,0:15:21.62:271,22,0	1/1:15,0:15:14.19:234,14,0	1/1:8,0:8:15.49:139,15,0	1/1:5,0:5:2.16:40,2,0	1/1:5,0:5:14.91:120,15,0	0/1:10,0:10:17.16:20,0,17	./.	0/0:10,0:11:8.02:0,8,33	1/1:4,0:5:1.48:36,1,0	0/1:13,0:14:4.85:174,0,5	1/1:9,0:10:7.85:166,8,0	0/1:12,0:12:4:174,0,4	./.	./.	./.	0/1:10,1:11:3.71:4,0,21	1/1:10,0:10:23.89:184,24,0	1/1:21,0:20:50.53:470,51,0	1/1:1,4:5:0.26:44,0,0
chr10	60364498	.	A	ACG	1496.61	PASS	AB=1.000;AC=40;AF=0.909;AN=44;BaseQRankSum=-2.679;DP=276;FS=4.446;HRun=0;HaplotypeScore=62.4492;InbreedingCoeff=0.2290;MQ=60.53;MQ0=10;MQRankSum=-0.088;QD=5.65;ReadPosRankSum=0.481;VQSLOD=2.3038;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:16:14.93:114,15,0	1/1:6,0:5:2.74:12,3,0	0/0:9,0:4:5.93:0,6,40	0/1:19,0:8:1.03:1,0,9	1/1:22,0:21:17.57:149,18,0	./.	./.	./.	1/1:8,0:8:8.87:65,9,0	1/1:17,0:16:21:189,21,0	1/1:15,0:15:14.83:110,15,0	1/1:13,0:13:6.01:67,6,0	1/1:2,0:2:3.01:49,3,0	1/1:8,0:8:5.88:39,6,0	1/1:7,0:6:3:25,3,0	1/1:4,0:4:3:25,3,0	1/1:17,0:17:14.44:100,14,0	1/1:3,6:9:2.96:19,3,0	0/1:11,0:9:11.91:38,0,12	1/1:18,0:17:5.95:44,6,0	1/1:27,0:26:26.59:208,27,0	./.	./.	./.	1/1:9,0:9:3:25,3,0	1/1:14,0:13:21.89:157,22,0	1/1:12,0:12:16.51:98,17,0	1/1:11,0:10:11.01:69,11,0
chr10	60365880	.	C	CAT	19643.97	PASS	AC=40;AF=0.909;AN=44;BaseQRankSum=-6.656;DP=509;FS=0.000;HRun=0;HaplotypeScore=77.0877;InbreedingCoeff=0.9960;MQ=58.78;MQ0=6;MQRankSum=-0.743;QD=42.15;ReadPosRankSum=4.514;VQSLOD=6.5908;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,49:48:99:1962,102,0	1/1:1,9:10:24.08:458,24,0	0/0:21,0:18:26.06:0,26,534	0/0:22,0:21:54.18:0,54,785	1/1:2,20:22:42.14:810,42,0	./.	./.	./.	1/1:0,19:20:48.16:922,48,0	1/1:2,31:27:78.27:1476,78,0	1/1:0,16:15:30.10:575,30,0	1/1:0,18:17:36.12:689,36,0	1/1:1,26:27:57.20:1095,57,0	1/1:0,20:19:48.16:921,48,0	1/1:1,20:21:42.14:795,42,0	1/1:0,19:20:54.19:1041,54,0	1/1:0,22:22:51.17:966,51,0	1/1:0,9:9:24.04:425,24,0	1/1:1,12:12:33.10:593,33,0	1/1:1,29:25:72.25:1390,72,0	1/1:1,42:43:99:1951,102,0	./.	./.	./.	1/1:3,21:19:36.12:695,36,0	1/1:3,30:30:81.28:1550,81,0	1/1:1,17:18:42.14:810,42,0	1/1:1,9:10:27.09:520,27,0
chr10	60367501	.	A	AAG	492.94	PASS	AC=24;AF=1.000;AN=24;DP=76;FS=0.000;HRun=0;HaplotypeScore=35.9704;InbreedingCoeff=0.0833;MQ=35.02;MQ0=0;QD=10.27;VQSLOD=2.7264;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	./.	1/1:6,3:8:10.43:61,10,0	./.	./.	1/1:2,4:6:7.49:44,7,0	./.	./.	1/1:2,1:3:8.83:54,9,0	1/1:6,0:6:8.91:61,9,0	1/1:0,1:1:2.97:20,3,0	1/1:4,2:6:10.46:63,10,0	1/1:1,3:4:8.90:60,9,0	./.	./.	1/1:1,0:1:1.25:3,1,0	./.	1/1:4,0:5:11.46:105,11,0	1/1:0,1:1:3.01:38,3,0	1/1:2,0:2:2.92:17,3,0	./.	./.	./.	1/1:4,0:4:5.93:40,6,0	./.
chr10	60378083	.	TA	T	585.26	PASS	AB=0.946;AC=34;AF=0.773;AN=44;BaseQRankSum=2.239;DP=117;FS=18.949;HRun=9;HaplotypeScore=56.1957;InbreedingCoeff=0.2397;MQ=47.84;MQ0=16;MQRankSum=-2.227;QD=6.03;ReadPosRankSum=4.986;VQSLOD=-0.0106;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:9,1:7:1.32:41,0,1	1/1:2,0:2:4.99:18,5,0	0/0:5,0:2:6.02:0,6,69	0/0:8,0:4:4.72:0,5,17	0/1:6,1:6:4.37:8,0,4	./.	./.	./.	1/1:3,0:3:7.49:28,7,0	1/1:5,2:7:3.92:66,4,0	1/1:3,1:4:5.50:37,5,0	0/1:2,0:2:1.92:5,0,2	1/1:1,0:1:2.50:9,2,0	1/1:4,1:5:5.92:47,6,0	1/1:5,1:3:8.19:47,8,0	1/1:1,0:1:2.37:8,2,0	1/1:10,0:6:8.60:44,9,0	1/1:1,3:4:2.22:72,2,0	1/1:8,2:7:7.89:75,8,0	1/1:0,2:2:6:55,6,0	0/0:4,0:2:0.25:0,0,5	./.	./.	./.	1/1:4,0:3:6.49:25,6,0	1/1:3,0:3:7.59:28,8,0	1/1:7,0:6:15.42:59,15,0	0/1:9,0:7:2.80:23,0,3
chr10	60378087	.	A	AT	774.48	PASS	AB=0.779;AC=28;AF=0.636;AN=44;BaseQRankSum=2.779;DP=133;FS=17.558;HRun=0;HaplotypeScore=63.9298;InbreedingCoeff=-0.0844;MQ=50.86;MQ0=15;MQRankSum=-1.112;QD=6.92;ReadPosRankSum=7.074;VQSLOD=1.3510;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:8,3:8:15.80:50,0,16	1/1:0,2:2:5.96:43,6,0	0/0:6,0:3:8.76:0,9,95	0/0:9,0:4:5.83:0,6,34	0/1:4,4:7:25.17:25,0,41	./.	./.	./.	1/1:1,3:4:4.54:58,5,0	0/1:4,3:7:4.45:78,0,4	1/1:2,3:5:1.47:27,1,0	0/1:2,1:3:5.74:16,0,6	0/1:1,1:2:6.56:16,0,7	1/1:2,3:5:2.75:63,3,0	0/1:7,2:6:16.20:32,0,16	1/1:0,1:1:2.97:20,3,0	1/1:5,5:6:5.51:81,6,0	0/1:5,0:5:5.95:15,0,6	1/1:8,3:7:3.46:72,3,0	0/1:5,0:5:7.18:7,0,9	0/0:3,0:2:5.16:0,5,25	./.	./.	./.	0/1:3,2:4:3.28:34,0,3	1/1:0,3:3:8.98:72,9,0	1/1:1,6:6:17.87:128,18,0	0/1:5,4:7:12.07:70,0,12
chr10	60378089	.	A	AAT	2504.02	PASS	AB=0.688;AC=39;AF=0.886;AN=44;BaseQRankSum=1.056;DP=139;FS=59.676;HRun=0;HaplotypeScore=61.5854;InbreedingCoeff=0.4761;MQ=51.21;MQ0=15;MQRankSum=-4.662;QD=20.87;ReadPosRankSum=2.262;VQSLOD=1.4271;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:6,3:8:16.63:134,0,17	1/1:0,2:2:6.02:68,6,0	0/0:6,0:3:8.70:0,9,99	0/0:10,0:5:8.27:0,8,46	1/1:3,4:8:17.96:192,18,0	./.	./.	./.	1/1:1,3:4:11.97:119,12,0	1/1:2,3:7:20.55:249,21,0	1/1:2,3:5:8.90:70,9,0	1/1:1,1:3:8.97:102,9,0	1/1:2,1:3:5.95:52,6,0	1/1:1,3:5:15.01:171,15,0	1/1:7,2:6:16.05:123,16,0	1/1:0,1:1:3.01:32,3,0	1/1:6,4:7:18.94:230,19,0	1/1:4,0:5:13.73:114,14,0	1/1:6,3:9:19.08:190,19,0	1/1:5,0:5:13.04:78,13,0	1/1:1,0:2:5.93:45,6,0	./.	./.	./.	1/1:2,2:4:11.95:114,12,0	1/1:0,3:3:9.03:108,9,0	1/1:1,6:6:18.05:202,18,0	1/1:2,4:7:18.05:230,18,0
chr10	60378099	.	A	AAT	4600.43	PASS	AC=40;AF=0.909;AN=44;BaseQRankSum=0.247;DP=148;FS=61.047;HRun=0;HaplotypeScore=58.0672;InbreedingCoeff=0.5932;MQ=53.96;MQ0=10;MQRankSum=-4.120;QD=36.22;ReadPosRankSum=2.094;VQSLOD=2.2245;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,3:8:2.41:278,2,0	1/1:0,2:2:6.02:113,6,0	0/0:7,0:3:9.03:0,9,125	0/0:12,0:7:14.34:0,14,158	1/1:6,5:10:26.92:364,27,0	./.	./.	./.	1/1:2,3:5:12.04:213,12,0	1/1:4,4:8:20.96:322,21,0	1/1:1,4:5:9.03:155,9,0	1/1:2,1:3:9.03:143,9,0	1/1:2,1:3:9.02:125,9,0	1/1:3,4:7:17.96:285,18,0	1/1:7,2:6:18.06:272,18,0	1/1:0,1:1:3.01:57,3,0	1/1:6,5:8:12.42:330,12,0	1/1:4,2:6:15.05:253,15,0	1/1:13,3:12:26.73:355,27,0	1/1:3,1:4:12.04:186,12,0	1/1:2,0:2:5.61:64,6,0	./.	./.	./.	1/1:2,2:4:12.04:209,12,0	1/1:0,3:3:9.03:170,9,0	1/1:0,6:6:18.06:339,18,0	1/1:7,4:9:23.93:368,24,0
chr10	60378101	.	AAT	A	3067.60	PASS	AC=40;AF=0.909;AN=44;BaseQRankSum=0.461;DP=146;FS=55.179;HRun=0;HaplotypeScore=61.5607;InbreedingCoeff=0.5918;MQ=62.21;MQ0=8;MQRankSum=-4.316;QD=24.94;ReadPosRankSum=2.398;VQSLOD=1.9303;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,2:8:4.31:195,4,0	1/1:2,0:2:6:52,6,0	0/0:8,0:4:11.99:0,12,161	0/0:13,0:8:17.69:0,18,198	1/1:5,6:10:30.04:383,30,0	./.	./.	./.	1/1:3,2:5:12:120,12,0	1/1:4,4:8:20.71:226,21,0	1/1:4,1:5:8.04:76,8,0	1/1:1,2:3:9.02:115,9,0	1/1:1,2:3:9.02:116,9,0	1/1:7,1:8:23.01:216,23,0	1/1:5,3:5:15.02:185,15,0	1/1:1,0:1:2.99:23,3,0	1/1:10,1:8:12.40:217,12,0	1/1:2,3:5:9.39:100,9,0	1/1:3,11:11:30.02:333,30,0	1/1:1,3:4:10.85:141,11,0	1/1:1,1:2:3.01:42,3,0	./.	./.	./.	1/1:2,2:4:12.01:137,12,0	1/1:3,0:3:9:79,9,0	1/1:6,0:6:18:158,18,0	1/1:8,3:9:24.04:276,24,0
chr10	60378238	.	T	TC	10043.92	PASS	AC=40;AF=0.909;AN=44;BaseQRankSum=-4.936;DP=285;FS=9.189;HRun=0;HaplotypeScore=31.8658;InbreedingCoeff=0.8655;MQ=78.18;MQ0=0;MQRankSum=-5.842;QD=40.34;ReadPosRankSum=6.291;VQSLOD=3.5771;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,33:33:90.31:1427,90,0	1/1:0,2:2:3.01:48,3,0	0/0:17,0:17:42.11:0,42,568	0/0:18,0:17:47.87:0,48,582	1/1:0,7:7:21:305,21,0	./.	./.	./.	1/1:0,10:10:27.09:430,27,0	1/1:0,5:5:15.05:239,15,0	1/1:0,7:7:18.06:288,18,0	1/1:0,14:14:39.13:620,39,0	1/1:0,10:10:24.08:383,24,0	1/1:0,10:10:21.07:335,21,0	1/1:1,13:14:30.10:470,30,0	1/1:0,4:4:9.03:144,9,0	1/1:0,22:22:57.19:910,57,0	1/1:0,14:14:36.12:574,36,0	1/1:0,15:15:45.14:694,45,0	1/1:0,9:9:24.08:383,24,0	1/1:0,25:25:57.13:881,57,0	./.	./.	./.	1/1:0,7:7:15.05:240,15,0	1/1:1,12:13:36.12:575,36,0	1/1:0,15:15:30.10:478,30,0	1/1:0,13:13:39.13:622,39,0
chr10	60378348	.	T	TA	7068.82	PASS	AC=40;AF=0.909;AN=44;BaseQRankSum=3.765;DP=298;FS=37.944;HRun=4;HaplotypeScore=83.2302;InbreedingCoeff=0.9287;MQ=72.85;MQ0=1;MQRankSum=-3.330;QD=25.80;ReadPosRankSum=3.068;VQSLOD=2.5685;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,17:18:33.06:377,33,0	1/1:0,5:5:12.03:134,12,0	0/0:11,0:10:24.08:0,24,312	0/0:13,0:12:18.53:0,19,235	1/1:4,17:21:11.54:314,12,0	./.	./.	./.	1/1:1,11:12:30.09:349,30,0	1/1:0,16:16:45.11:522,45,0	1/1:0,18:18:39.55:450,40,0	1/1:0,8:8:15.05:177,15,0	1/1:2,10:12:26.73:348,27,0	1/1:0,10:10:24.03:271,24,0	1/1:1,7:7:15.05:178,15,0	1/1:1,6:7:18.05:213,18,0	1/1:1,18:19:48.13:559,48,0	1/1:4,9:13:24.54:285,25,0	1/1:3,12:17:31.60:451,32,0	1/1:2,12:14:32.70:383,33,0	1/1:2,8:10:21.02:234,21,0	./.	./.	./.	1/1:0,9:9:15.05:179,15,0	1/1:0,21:21:60.13:685,60,0	1/1:0,26:26:57.18:679,57,0	1/1:1,9:10:24.07:283,24,0
chr10	60380365	.	A	AAGACAGACAGAC	25286.89	PASS	AC=40;AF=0.909;AN=44;BaseQRankSum=-0.236;DP=499;FS=1.329;HRun=0;HaplotypeScore=229.0459;InbreedingCoeff=0.8801;MQ=60.93;MQ0=5;MQRankSum=-1.650;QD=56.82;ReadPosRankSum=1.609;VQSLOD=4.3356;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:26:26.96:849,27,0	1/1:9,0:9:12.04:509,12,0	0/0:28,0:19:15.03:0,15,242	0/0:24,0:19:12.04:0,12,215	1/1:29,0:29:48.15:1266,48,0	./.	./.	./.	1/1:26,0:26:39.13:1776,39,0	1/1:28,0:28:54.18:1811,54,0	1/1:26,0:26:12.02:692,12,0	1/1:20,0:20:24.08:1377,24,0	1/1:12,0:12:18.06:926,18,0	1/1:16,0:16:36.12:1986,36,0	1/1:25,0:25:36.11:1525,36,0	1/1:17,0:17:21.07:979,21,0	1/1:20,5:31:10.71:549,11,0	1/1:9,0:9:8.94:123,9,0	1/1:31,0:31:24.08:712,24,0	1/1:25,0:25:45.13:1844,45,0	1/1:19,0:19:14.95:524,15,0	./.	./.	./.	1/1:20,0:20:36.11:1598,36,0	1/1:34,0:34:78.21:2380,78,0	1/1:25,0:24:48.10:2182,48,0	1/1:17,0:17:33.11:1677,33,0
chr10	60380367	.	G	GACAGACAGACAG	25156.42	PASS	AC=40;AF=0.909;AN=44;BaseQRankSum=-0.248;DP=494;FS=1.332;HRun=0;HaplotypeScore=225.0203;InbreedingCoeff=0.8647;MQ=58.95;MQ0=5;MQRankSum=-1.249;QD=56.91;ReadPosRankSum=1.566;VQSLOD=4.7251;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:26:26.96:849,27,0	1/1:9,0:9:12.04:509,12,0	0/0:27,0:18:15.03:0,15,242	0/0:23,0:18:12.04:0,12,215	1/1:29,0:29:48.15:1266,48,0	./.	./.	./.	1/1:28,0:28:39.13:1776,39,0	1/1:26,0:26:54.18:1733,54,0	1/1:19,4:25:12.02:692,12,0	1/1:18,0:18:24.08:1377,24,0	1/1:12,0:12:18.06:926,18,0	1/1:15,0:15:36.12:1986,36,0	1/1:25,0:25:36.11:1525,36,0	1/1:17,0:17:21.07:979,21,0	1/1:32,0:32:7.70:496,8,0	1/1:9,0:9:8.94:123,9,0	1/1:31,0:31:24.08:712,24,0	1/1:25,0:25:45.13:1844,45,0	1/1:19,0:19:14.95:524,15,0	./.	./.	./.	1/1:20,0:20:36.11:1598,36,0	1/1:34,0:34:78.21:2380,78,0	1/1:25,0:24:48.10:2182,48,0	1/1:17,0:17:33.11:1677,33,0
chr10	60380369	.	C	CAGACAGACAGAC	25330.91	PASS	AC=40;AF=0.909;AN=44;BaseQRankSum=-0.242;DP=490;FS=1.334;HRun=0;HaplotypeScore=225.0308;InbreedingCoeff=0.8664;MQ=55.61;MQ0=6;MQRankSum=-1.925;QD=57.57;ReadPosRankSum=1.492;VQSLOD=4.3317;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:25:26.96:849,27,0	1/1:9,0:9:12.04:509,12,0	0/0:26,0:17:15.03:0,15,242	0/0:20,0:16:12.04:0,12,215	1/1:30,0:30:48.15:1266,48,0	./.	./.	./.	1/1:27,0:27:39.13:1776,39,0	1/1:27,0:27:54.18:1733,54,0	1/1:25,0:25:12.02:692,12,0	1/1:14,3:20:24.08:1377,24,0	1/1:12,0:12:21.07:1100,21,0	1/1:15,0:15:36.12:1986,36,0	1/1:24,0:24:36.11:1525,36,0	1/1:18,0:18:21.07:979,21,0	1/1:32,0:32:7.70:496,8,0	1/1:9,0:9:8.94:123,9,0	1/1:28,0:28:24.08:712,24,0	1/1:25,0:25:45.13:1844,45,0	1/1:19,0:19:14.95:524,15,0	./.	./.	./.	1/1:20,0:20:36.11:1598,36,0	1/1:32,0:32:78.21:2380,78,0	1/1:26,0:25:48.10:2182,48,0	1/1:17,0:17:33.11:1677,33,0
chr10	60380393	.	C	CAG	3225.28	PASS	AB=0.817;AC=20;AF=0.455;AN=44;BaseQRankSum=10.211;DP=510;FS=8.423;HRun=0;HaplotypeScore=213.8428;InbreedingCoeff=-0.8098;MQ=46.04;MQ0=9;MQRankSum=-7.179;QD=6.91;ReadPosRankSum=6.709;VQSLOD=1.5910;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:26,1:27:78.75:79,0,79	0/1:4,1:8:16.23:88,0,16	0/0:30,0:18:0.30:0,0,380	0/1:32,0:18:3:3,0,330	0/1:21,10:31:51.46:308,0,51	./.	./.	./.	0/1:19,6:33:86.23:161,0,86	0/1:21,4:25:24.67:290,0,25	0/1:17,5:22:37.63:51,0,38	0/1:12,5:17:37.08:138,0,37	0/1:9,4:13:31.80:101,0,32	0/1:14,8:22:67.98:183,0,68	0/1:16,6:22:12.98:146,0,13	0/1:13,5:18:25.17:121,0,25	0/1:30,0:30:30.91:31,0,76	0/0:10,0:10:13.55:0,14,83	0/1:24,2:26:99:207,0,105	0/1:20,7:27:4.23:260,0,4	0/1:19,1:20:46.32:93,0,46	./.	./.	./.	0/1:14,5:19:18.14:166,0,18	0/1:26,4:30:58.59:403,0,59	0/1:18,8:25:77.70:307,0,78	0/1:7,7:19:76.18:219,0,76
chr10	60380395	.	C	CAGACAGACAG	13395.36	PASS	AB=0.854;AC=24;AF=0.545;AN=44;BaseQRankSum=5.191;DP=498;FS=5.304;HRun=0;HaplotypeScore=235.1553;InbreedingCoeff=-0.5048;MQ=46.39;MQ0=9;MQRankSum=-2.087;QD=30.86;ReadPosRankSum=1.581;VQSLOD=3.9840;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:26,1:27:68.93:165,0,69	0/1:7,1:8:5.80:298,0,6	0/0:29,0:18:40.24:0,40,514	0/0:32,0:18:30.15:0,30,749	1/1:20,0:30:11.76:1129,12,0	./.	./.	./.	0/1:26,5:31:29.51:899,0,30	0/1:22,4:26:35.87:854,0,36	0/1:14,4:19:14.61:425,0,15	0/1:10,5:15:30.32:799,0,30	0/1:11,3:15:15.83:569,0,16	0/1:15,7:23:50.83:1255,0,51	1/1:18,4:22:31.12:688,31,0	0/1:12,5:17:24.29:558,0,24	0/1:28,0:28:83.80:268,0,84	0/1:10,0:10:28.01:28,0,100	0/1:24,2:26:86.19:505,0,86	1/1:19,7:26:1.18:1042,1,0	0/1:19,1:20:59.64:239,0,60	./.	./.	./.	1/1:15,5:20:4.75:790,5,0	0/1:27,0:30:99:689,0,113	0/1:18,8:25:99:1173,0,133	0/1:8,1:15:99:1021,0,110
chr10	60384849	.	ATTT	A	4906.31	PASS	AB=0.606;AC=33;AF=0.750;AN=44;BaseQRankSum=-7.050;DP=370;FS=40.743;HRun=14;HaplotypeScore=104.3843;InbreedingCoeff=0.3392;MQ=57.47;MQ0=2;MQRankSum=-1.255;QD=15.28;ReadPosRankSum=2.676;VQSLOD=0.7007;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:6,1:11:17.15:17,0,82	1/1:3,3:6:8.99:105,9,0	0/0:24,0:12:19.84:0,20,197	0/0:14,0:6:2.60:0,3,63	0/1:6,2:27:32.19:32,0,109	./.	./.	./.	0/1:8,1:17:19.09:19,0,49	1/1:7,10:18:27.31:306,27,0	1/1:3,16:19:45.02:526,45,0	1/1:2,5:8:13.55:173,14,0	1/1:3,9:13:18.87:242,19,0	1/1:4,12:16:33.03:386,33,0	1/1:10,8:19:23.84:263,24,0	1/1:3,7:10:20.99:245,21,0	1/1:5,11:17:27.22:345,27,0	0/1:6,1:20:8.13:8,0,130	1/1:10,14:24:43.69:488,44,0	1/1:5,16:22:37.44:453,37,0	1/1:2,7:9:11.95:140,12,0	./.	./.	./.	1/1:2,19:22:57.07:649,57,0	0/1:3,1:17:11.40:11,0,58	1/1:5,20:25:23.15:498,23,0	0/0:0,0:9:10.46:0,10,39
chr10	60385616	.	A	AT	12393.13	PASS	AC=40;AF=0.909;AN=44;BaseQRankSum=-6.243;DP=441;FS=14.268;HRun=8;HaplotypeScore=52.9295;InbreedingCoeff=0.9853;MQ=65.99;MQ0=0;MQRankSum=-5.112;QD=29.65;ReadPosRankSum=3.807;VQSLOD=3.7517;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,24:27:51.26:723,51,0	1/1:2,13:15:39.12:449,39,0	0/0:12,0:12:29.99:0,30,267	0/0:11,0:9:14.53:0,15,101	1/1:1,30:31:87.21:985,87,0	./.	./.	./.	1/1:2,17:19:45.13:519,45,0	1/1:3,30:33:93.23:1041,93,0	1/1:2,24:26:69.20:796,69,0	1/1:0,20:20:51.15:588,51,0	1/1:2,20:22:57.17:657,57,0	1/1:2,10:12:30.09:346,30,0	1/1:1,12:13:30.09:346,30,0	1/1:0,14:14:42.12:485,42,0	1/1:2,18:20:53.64:589,54,0	1/1:1,11:12:33.10:381,33,0	1/1:4,13:17:39.09:436,39,0	1/1:2,31:33:93.28:1071,93,0	1/1:1,20:21:54.16:622,54,0	./.	./.	./.	1/1:2,17:19:48.14:551,48,0	1/1:2,25:27:72.20:819,72,0	1/1:3,25:28:69.20:791,69,0	1/1:0,8:9:18.04:199,18,0
chr10	60387607	.	A	AT	13350.93	PASS	AB=0.579;AC=39;AF=0.886;AN=44;BaseQRankSum=-8.051;DP=460;FS=19.164;HRun=7;HaplotypeScore=56.3105;InbreedingCoeff=0.8464;MQ=67.98;MQ0=1;MQRankSum=-3.000;QD=32.17;ReadPosRankSum=6.291;VQSLOD=2.9983;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,23:24:67.14:781,67,0	1/1:1,9:10:27.08:326,27,0	0/0:26,0:24:51.42:0,51,455	0/0:17,0:16:45.05:0,45,422	1/1:0,31:31:90.23:1071,90,0	./.	./.	./.	1/1:2,14:16:36.11:433,36,0	1/1:3,21:24:66.20:796,66,0	1/1:2,28:30:81.24:969,81,0	1/1:1,21:22:63.19:761,63,0	1/1:1,17:18:48.15:580,48,0	1/1:1,15:17:39.11:461,39,0	1/1:0,18:18:51.16:616,51,0	1/1:1,13:14:39.12:471,39,0	0/1:3,8:11:1.83:247,0,2	1/1:3,17:20:51.16:616,51,0	1/1:0,13:13:39.12:471,39,0	1/1:5,39:44:99:1380,117,0	1/1:0,5:5:15.05:181,15,0	./.	./.	./.	1/1:3,16:19:48.15:580,48,0	1/1:2,24:26:72.21:858,72,0	1/1:1,32:34:99:1174,99,0	1/1:2,17:19:48.15:580,48,0
chr10	60392380	.	G	GA	8147.10	PASS	AC=40;AF=0.909;AN=44;BaseQRankSum=-5.384;DP=340;FS=1.118;HRun=9;HaplotypeScore=39.4872;InbreedingCoeff=0.8462;MQ=61.01;MQ0=7;MQRankSum=-3.204;QD=25.38;ReadPosRankSum=2.952;VQSLOD=5.1497;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,11:16:29.76:281,30,0	1/1:0,6:6:18.05:199,18,0	0/0:10,0:8:23.02:0,23,185	0/0:5,0:3:9:0,9,78	1/1:4,18:22:31.10:568,31,0	./.	./.	./.	1/1:1,10:11:27.07:299,27,0	1/1:5,14:19:16.06:405,16,0	1/1:5,17:22:51.14:561,51,0	1/1:3,9:12:30.07:325,30,0	1/1:3,16:19:48.13:525,48,0	1/1:3,17:19:42.11:465,42,0	1/1:1,11:12:30.08:332,30,0	1/1:0,7:7:18.05:199,18,0	1/1:1,5:6:15.04:166,15,0	1/1:4,10:12:4.04:273,4,0	1/1:3,13:15:16.10:405,16,0	1/1:4,25:29:52.08:778,52,0	1/1:3,12:15:33.09:365,33,0	./.	./.	./.	1/1:2,12:14:10.04:339,10,0	1/1:1,18:19:54.15:597,54,0	1/1:2,20:22:48.12:531,48,0	1/1:2,18:20:49.38:534,49,0
chr10	60393142	.	G	GT	4255.58	PASS	AC=38;AF=0.905;AN=42;BaseQRankSum=-5.357;DP=239;FS=17.941;HRun=9;HaplotypeScore=30.7183;InbreedingCoeff=0.7370;MQ=79.24;MQ0=11;MQRankSum=-1.625;QD=26.43;ReadPosRankSum=3.739;VQSLOD=3.2680;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,15:16:42.11:464,42,0	./.	0/0:46,0:15:8.44:0,8,115	0/0:28,0:10:13.59:0,14,93	1/1:1,4:6:14.87:147,15,0	./.	./.	./.	1/1:2,3:5:9.02:100,9,0	1/1:1,10:11:30.07:324,30,0	1/1:0,13:13:33.09:365,33,0	1/1:0,4:4:12.03:133,12,0	1/1:1,5:6:12.03:133,12,0	1/1:0,3:3:9.02:99,9,0	1/1:0,2:2:6.02:66,6,0	1/1:0,5:4:9.02:100,9,0	1/1:1,10:11:30.08:332,30,0	1/1:2,5:7:15.04:166,15,0	1/1:2,13:15:36.07:387,36,0	1/1:0,10:10:30.08:332,30,0	1/1:0,6:5:9.02:100,9,0	./.	./.	./.	1/1:0,9:9:24.06:266,24,0	1/1:2,11:13:33.09:365,33,0	1/1:1,10:13:26.91:280,27,0	1/1:0,6:6:9.02:100,9,0
chr10	60393202	.	CATTTATTT	C	504.20	PASS	AC=14;AF=1.000;AN=14;DP=112;FS=0.000;HRun=0;HaplotypeScore=39.3246;MQ=39.98;MQ0=21;QD=15.28;VQSLOD=0.9973;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	1/1:0,2:2:3.01:74,3,0	./.	./.	./.	./.	./.	./.	./.	./.	./.	1/1:2,0:3:3.01:56,3,0	1/1:4,0:5:3.01:56,3,0	./.	1/1:1,0:2:3.01:56,3,0	./.	./.	1/1:6,1:4:3.01:74,3,0	./.	./.	./.	./.	./.	./.	./.	1/1:6,2:8:9.03:184,9,0	./.	1/1:5,1:6:3.01:74,3,0
chr10	60395413	.	GGTC	G	56.04	PASS	AC=4;AF=0.167;AN=24;BaseQRankSum=2.599;DP=594;FS=0.000;HRun=0;HaplotypeScore=15.0887;InbreedingCoeff=0.4227;MQ=13.78;MQ0=295;MQRankSum=-0.282;QD=2.24;ReadPosRankSum=1.785;VQSLOD=0.7493;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:12,0:3:6.02:0,6,147	./.	./.	0/0:51,2:20:15.05:0,15,366	./.	./.	./.	./.	0/0:38,0:9:24.08:0,24,590	0/0:40,0:7:3.01:0,3,73	./.	./.	./.	0/0:15,0:3:3.01:0,3,73	./.	./.	0/0:37,0:5:3.01:0,3,74	0/0:21,0:4:12.01:0,12,243	0/0:29,0:11:5.97:0,6,75	./.	./.	1/1:8,1:1:3.01:47,3,0	./.	0/0:22,0:7:3.01:0,3,73	0/0:33,0:6:15.05:0,15,368	./.	1/1:14,2:3:6.02:95,6,0
chr10	60400586	.	CT	C	3125.41	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=10.139;DP=429;FS=10.457;HRun=2;HaplotypeScore=39.6094;InbreedingCoeff=0.9849;MQ=83.86;MQ0=0;MQRankSum=-1.923;QD=35.92;ReadPosRankSum=0.117;VQSLOD=2.7903;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:39.13:0,39,584	0/0:12,0:12:36.12:0,36,538	0/0:18,0:18:54.16:0,54,774	0/0:7,0:7:19.62:0,20,270	0/0:37,0:37:99:0,105,1555	1/1:1,17:18:51.17:662,51,0	1/1:0,10:10:27.09:351,27,0	1/1:0,27:27:81.26:1052,81,0	0/0:11,0:11:33.11:0,33,495	0/0:22,0:22:66.22:0,66,973	0/0:23,0:23:69.22:0,69,1014	0/0:8,0:8:24.08:0,24,360	0/0:10,0:10:30.09:0,30,426	0/0:15,0:15:45.14:0,45,638	0/0:19,0:19:57.18:0,57,833	0/0:8,0:8:24.08:0,24,360	0/0:11,0:11:33.11:0,33,491	0/0:13,0:13:36.09:0,36,512	0/0:11,0:11:30.09:0,30,428	0/0:27,0:27:81.27:0,81,1213	0/0:13,0:13:36.12:0,36,538	1/1:0,16:16:48.16:623,48,0	1/1:0,12:12:36.12:467,36,0	1/1:0,4:4:12.04:156,12,0	0/0:19,0:19:57.18:0,57,835	0/0:15,0:15:45.13:0,45,637	0/0:26,0:26:78.26:0,78,1169	0/0:4,0:4:12.04:0,12,180
chr10	60400893	.	T	TGG	2957.36	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-9.667;DP=399;FS=3.832;HRun=7;HaplotypeScore=45.1043;InbreedingCoeff=0.9775;MQ=84.35;MQ0=0;MQRankSum=-4.238;QD=33.61;ReadPosRankSum=-3.027;VQSLOD=2.6960;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:26.81:0,27,292	0/0:6,0:6:15.04:0,15,175	0/0:14,0:14:42.11:0,42,478	0/0:11,0:11:11.06:0,11,268	0/0:27,0:27:72.21:0,72,839	1/1:3,13:16:33.58:542,34,0	1/1:1,8:9:15.05:246,15,0	1/1:5,19:25:57.16:880,57,0	0/0:13,0:13:27.07:0,27,315	0/0:13,0:13:36.10:0,36,419	0/0:24,0:24:69.21:0,69,804	0/0:5,0:5:12.04:0,12,140	0/0:12,0:12:33.10:0,33,384	0/0:14,0:14:42.12:0,42,489	0/0:11,0:11:33.10:0,33,384	0/0:9,0:9:21.04:0,21,234	0/0:14,0:14:39.12:0,39,454	0/0:9,0:9:24.06:0,24,279	0/0:11,0:11:30.09:0,30,350	0/0:17,0:17:39.07:0,39,444	0/0:16,0:16:45.13:0,45,524	1/1:2,11:13:30.10:479,30,0	1/1:4,9:14:30.06:455,30,0	1/1:0,11:11:33.11:541,33,0	0/0:20,0:20:54.15:0,54,629	0/0:21,0:21:57.17:0,57,664	0/0:23,0:23:57.16:0,57,664	0/0:10,0:10:30.09:0,30,349
chr10	60401823	.	CCTTTCTTG	C	5229.24	PASS	AB=1.000;AC=46;AF=0.852;AN=54;BaseQRankSum=-0.968;DP=345;FS=0.000;HRun=0;HaplotypeScore=167.4923;InbreedingCoeff=-0.0261;MQ=45.53;MQ0=2;MQRankSum=-2.168;QD=15.61;ReadPosRankSum=-4.255;VQSLOD=2.3112;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,11:18:14.24:181,14,0	1/1:7,0:7:16.35:171,16,0	0/1:13,0:6:10.03:10,0,49	0/0:6,0:2:3.01:0,3,46	1/1:1,18:19:18.01:393,18,0	1/1:9,0:9:18.21:219,18,0	./.	1/1:19,0:19:42.18:412,42,0	1/1:3,7:10:3.01:77,3,0	0/1:21,0:21:44.69:235,0,45	1/1:13,0:13:29.94:307,30,0	1/1:11,0:11:13.64:124,14,0	1/1:8,0:8:17.96:162,18,0	1/1:12,0:12:7:265,7,0	1/1:10,0:10:3.11:149,3,0	0/1:9,0:9:30.06:145,0,30	0/1:10,0:10:94.04:94,0,186	1/1:3,0:3:5.29:65,5,0	1/1:13,0:12:24.70:216,25,0	1/1:16,0:15:24.98:261,25,0	1/1:9,0:9:8.35:116,8,0	1/1:28,0:28:45.82:420,46,0	1/1:16,0:16:25.87:333,26,0	1/1:7,0:7:4.26:43,4,0	1/1:18,0:18:29.33:330,29,0	0/1:17,0:17:99:177,0,297	1/1:15,0:15:0.36:211,0,0	0/1:4,0:4:5.74:111,0,6
chr10	60401825	.	TTTCTTGCTTCCG	T	6508.67	PASS	AB=1.000;AC=32;AF=0.593;AN=54;BaseQRankSum=-6.111;DP=332;FS=15.142;HRun=0;HaplotypeScore=182.5250;InbreedingCoeff=-0.5899;MQ=45.64;MQ0=2;MQRankSum=0.580;QD=20.15;ReadPosRankSum=-11.158;VQSLOD=0.2690;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:16,0:17:2.04:94,0,2	0/1:7,0:7:9.13:223,0,9	0/1:11,0:5:9.13:9,0,67	0/0:6,0:2:3:0,3,27	1/1:19,0:19:17.97:165,18,0	0/1:9,0:9:15.39:232,0,15	./.	1/1:1,18:19:54.10:751,54,0	1/1:8,0:8:3:29,3,0	0/1:20,0:20:99:359,0,294	0/1:12,0:12:38.81:335,0,39	0/1:11,0:11:99:180,0,109	0/1:8,0:8:48.75:183,0,49	0/1:12,0:12:85.33:371,0,85	0/1:11,0:11:42.56:236,0,43	0/1:9,0:9:94.47:193,0,94	0/1:10,0:10:99:174,0,189	1/1:3,0:3:9.03:141,9,0	0/1:11,0:10:21.03:239,0,21	0/1:16,0:15:99:270,0,113	1/1:9,0:9:1.08:218,1,0	0/1:27,0:27:89.02:513,0,89	0/1:16,0:16:33.07:429,0,33	1/1:7,0:7:4.83:65,5,0	0/1:17,0:17:73.45:461,0,73	0/1:15,0:15:99:244,0,363	0/1:15,0:15:99:235,0,165	0/1:4,0:4:25.29:159,0,25
chr10	60401828	.	CTTG	C	1530.68	PASS	AB=0.877;AC=31;AF=0.574;AN=54;BaseQRankSum=2.326;DP=325;FS=33.807;HRun=0;HaplotypeScore=154.5890;InbreedingCoeff=-0.1203;MQ=44.95;MQ0=1;MQRankSum=-2.941;QD=5.49;ReadPosRankSum=3.082;VQSLOD=0.9902;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:16,0:16:2.71:34,0,3	0/1:6,1:7:0.68:41,0,1	0/0:11,0:5:14.98:0,15,176	0/0:6,0:2:3.01:0,3,58	0/1:18,0:18:1.04:53,0,1	1/1:8,2:10:13.12:80,13,0	./.	0/1:18,0:18:12.81:13,0,63	1/1:7,1:8:2.90:16,3,0	0/1:12,7:19:25.31:207,0,25	0/1:10,3:13:2.32:57,0,2	0/1:5,5:10:3.33:145,0,3	1/1:7,3:10:2.27:114,2,0	0/1:10,2:12:29.92:87,0,30	0/1:8,1:9:12.04:28,0,12	0/1:7,2:9:13.42:41,0,13	0/0:11,0:11:5.26:0,5,159	0/1:3,0:3:1.86:4,0,2	1/1:7,1:8:11.40:67,11,0	1/1:9,7:15:6.67:154,7,0	0/1:6,2:8:24.89:44,0,25	0/1:22,5:27:96.01:96,0,117	0/1:14,3:17:28.28:67,0,28	1/1:6,1:7:1.25:3,1,0	1/1:13,4:17:0.91:126,1,0	0/0:15,0:15:16.44:0,16,159	1/1:7,6:13:6.04:192,6,0	0/1:4,0:4:7.54:8,0,8
chr10	60402017	.	AACACACACAC	A	2150.74	PASS	AB=0.869;AC=28;AF=0.583;AN=48;BaseQRankSum=2.012;DP=394;FS=5.068;HRun=0;HaplotypeScore=147.6644;InbreedingCoeff=-0.0602;MQ=45.93;MQ0=19;MQRankSum=-1.468;QD=7.32;ReadPosRankSum=0.710;VQSLOD=2.1648;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:26:2.29:87,2,0	1/1:5,0:5:3.01:51,3,0	./.	./.	1/1:17,3:20:11.55:100,12,0	./.	0/1:10,0:12:19.40:19,0,41	0/1:23,0:23:11.09:11,0,29	0/1:6,1:8:9.98:24,0,10	0/0:14,0:13:6.77:0,7,73	0/1:16,3:21:17.89:212,0,18	1/1:7,3:9:3.01:88,3,0	0/1:8,0:8:27.37:80,0,27	1/1:9,2:10:3.01:77,3,0	1/1:9,1:11:14.62:215,15,0	1/1:6,6:12:8.99:159,9,0	./.	0/0:7,0:7:1.15:0,1,2	0/0:10,0:10:2.24:0,2,4	0/1:17,8:25:7.69:299,0,8	0/1:20,0:18:1.66:83,0,2	0/1:12,0:13:43.19:43,0,45	0/1:12,3:17:22.84:61,0,23	0/1:17,0:21:17.93:19,0,18	1/1:12,3:14:15.04:342,15,0	0/0:9,0:10:8.17:0,8,131	1/1:8,3:11:12.04:323,12,0	0/0:3,0:1:3.01:0,3,83
chr10	60402384	.	GA	G	6522	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=17.719;DP=711;FS=0.684;HRun=1;HaplotypeScore=85.7645;InbreedingCoeff=0.9947;MQ=75.63;MQ0=1;MQRankSum=-0.834;QD=39.05;ReadPosRankSum=2.083;VQSLOD=5.4300;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,132,2082	0/0:6,0:6:18.06:0,18,285	0/0:39,0:39:99:0,107,1671	0/0:31,0:32:83.29:0,83,1343	0/0:37,0:37:99:0,105,1651	1/1:0,29:29:84.28:1175,84,0	1/1:0,23:23:66.22:923,66,0	1/1:0,25:24:72.23:989,72,0	0/0:23,0:23:69.22:0,69,1080	0/0:25,0:25:72.25:0,72,1151	0/0:24,0:24:57.15:0,57,883	0/0:21,0:21:63.21:0,63,1005	0/0:21,0:21:63.18:0,63,955	0/0:15,0:15:42.13:0,42,649	0/0:23,0:23:69.24:0,69,1101	0/0:17,0:17:51.16:0,51,792	0/0:29,0:29:87.28:0,87,1361	0/0:8,0:8:24.08:0,24,382	0/0:24,0:24:72.25:0,72,1150	0/0:39,0:39:99:0,102,1607	0/0:33,0:33:99:0,99,1583	1/1:0,25:25:66.22:923,66,0	1/1:0,35:34:96.32:1338,96,0	1/1:0,30:30:84.28:1175,84,0	0/0:25,0:25:66.22:0,66,1050	0/0:26,0:25:78.27:0,78,1246	0/0:27,0:27:81.26:0,81,1272	0/0:5,0:5:15.05:0,15,238
chr10	60402790	.	G	GT	666.22	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.159;DP=512;FS=0.000;HRun=7;HaplotypeScore=59.2361;InbreedingCoeff=0.9198;MQ=74.61;MQ0=0;MQRankSum=0.673;QD=26.65;ReadPosRankSum=-4.172;VQSLOD=2.2770;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:51.08:0,51,493	0/0:11,0:11:24.04:0,24,231	0/0:18,0:17:36.68:0,37,348	0/0:7,0:7:14.11:0,14,109	0/0:35,0:35:86.20:0,86,822	0/0:27,0:27:66.10:0,66,637	0/0:11,0:11:27.04:0,27,261	1/1:4,21:25:63.19:761,63,0	0/0:23,0:23:57.09:0,57,550	0/0:23,0:23:69.09:0,69,658	0/0:25,0:25:69.11:0,69,666	0/0:14,0:14:42.07:0,42,406	0/0:17,0:17:45.07:0,45,434	0/0:15,0:15:36.05:0,36,347	0/0:12,0:12:36.06:0,36,348	0/0:4,0:4:12.02:0,12,116	0/0:16,0:16:40.88:0,41,381	0/0:5,0:5:12.01:0,12,116	0/0:18,0:18:51.08:0,51,492	0/0:28,0:28:72.11:0,72,695	0/0:13,0:13:33.05:0,33,319	0/0:22,0:22:60.09:0,60,579	0/0:19,0:19:45.06:0,45,435	0/0:13,0:13:36.05:0,36,342	0/0:25,0:25:69.09:0,69,661	0/0:20,0:20:57.09:0,57,550	0/0:40,0:40:99:0,102,973	0/0:9,0:9:24.04:0,24,232
chr10	60403510	.	TAG	T	5240.18	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=12.256;DP=635;FS=5.195;HRun=0;HaplotypeScore=72.9381;InbreedingCoeff=0.9865;MQ=58.57;MQ0=3;MQRankSum=2.689;QD=37.70;ReadPosRankSum=-2.408;VQSLOD=6.2541;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:18:54.19:0,54,1011	0/0:10,0:10:30.10:0,30,562	0/0:29,0:17:45.15:0,45,797	0/0:17,0:7:18.03:0,18,302	0/0:24,0:24:72.23:0,72,1308	1/1:0,19:19:48.16:707,48,0	1/1:1,18:19:45.15:663,45,0	1/1:0,28:27:69.19:955,69,0	0/0:20,0:20:54.17:0,54,980	0/0:41,0:41:99:0,117,2151	0/0:28,0:28:78.26:0,78,1431	0/0:21,0:21:60.21:0,60,1108	0/0:22,0:22:66.21:0,66,1197	0/0:28,0:28:81.28:0,81,1495	0/0:19,0:19:57.20:0,57,1068	0/0:20,0:20:60.21:0,60,1124	0/0:15,0:15:39.13:0,39,730	0/0:13,0:13:36.12:0,36,664	0/0:24,0:22:57.20:0,57,1058	0/0:43,0:43:99:0,120,2192	0/0:24,0:24:69.24:0,69,1292	1/1:0,32:32:90.30:1325,90,0	1/1:1,26:27:66.22:972,66,0	1/1:0,14:14:42.14:619,42,0	0/0:25,0:25:72.25:0,72,1342	0/0:22,0:22:66.23:0,66,1237	0/0:29,0:29:81.25:0,81,1435	0/0:3,0:3:9.03:0,9,168
chr10	60403907	.	TG	T	5524.14	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=14.250;DP=659;FS=7.690;HRun=1;HaplotypeScore=79.6091;InbreedingCoeff=0.9997;MQ=63.11;MQ0=4;MQRankSum=4.445;QD=40.62;ReadPosRankSum=-0.895;VQSLOD=4.7632;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:78.22:0,78,1191	0/0:10,0:10:30.10:0,30,479	0/0:32,0:20:54.18:0,54,853	0/0:28,0:22:51.08:0,51,859	0/0:37,0:37:99:0,111,1726	1/1:0,23:23:66.22:923,66,0	1/1:0,17:17:48.12:649,48,0	1/1:0,24:24:72.22:976,72,0	0/0:25,0:25:75.24:0,75,1173	0/0:27,0:27:81.23:0,81,1224	0/0:32,0:32:93.32:0,93,1484	0/0:20,0:20:60.19:0,60,936	0/0:19,0:19:57.17:0,57,885	0/0:21,0:21:63.20:0,63,982	0/0:18,0:18:54.17:0,54,837	0/0:17,0:17:51.16:0,51,792	0/0:29,0:29:81.23:0,81,1265	0/0:21,0:21:57.12:0,57,856	0/0:16,0:16:48.16:0,48,767	0/0:32,0:32:93.30:0,93,1460	0/0:24,0:24:72.25:0,72,1150	1/1:0,29:29:87.29:1216,87,0	1/1:0,20:20:60.20:838,60,0	1/1:0,23:23:66.22:923,66,0	0/0:28,0:28:81.28:0,81,1294	0/0:20,0:20:60.20:0,60,938	0/0:28,0:28:84.24:0,84,1268	0/0:9,0:9:27.09:0,27,431
chr10	60404195	.	AT	A	4107.61	PASS	AB=0.526;AC=11;AF=0.196;AN=56;BaseQRankSum=11.066;DP=541;FS=2.322;HRun=2;HaplotypeScore=54.9006;InbreedingCoeff=0.8398;MQ=66.15;MQ0=0;MQRankSum=-2.044;QD=35.11;ReadPosRankSum=-0.486;VQSLOD=3.7149;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:63.18:0,63,918	0/0:9,0:9:27.09:0,27,405	0/0:11,0:11:28.54:0,29,414	0/0:17,0:15:45.15:0,45,660	0/0:33,0:33:96.32:0,96,1421	1/1:0,17:17:51.17:662,51,0	0/1:1,9:10:13.91:321,0,14	1/1:3,40:43:99:1529,120,0	0/0:22,0:22:63.20:0,63,907	0/0:23,0:23:69.23:0,69,1035	0/0:24,0:24:66.22:0,66,989	0/0:14,0:14:42.14:0,42,630	0/0:10,0:10:30.10:0,30,450	0/0:14,0:14:39.13:0,39,584	0/0:17,0:17:51.17:0,51,747	0/0:18,0:18:54.17:0,54,790	0/0:31,0:31:81.98:0,82,1211	0/0:18,0:18:48.12:0,48,682	0/0:14,0:13:36.12:0,36,540	0/0:28,0:28:84.26:0,84,1220	0/0:16,0:16:48.16:0,48,719	1/1:0,12:12:27.09:351,27,0	1/1:0,21:21:60.09:779,60,0	1/1:1,13:14:1.99:466,2,0	0/0:13,0:13:39.13:0,39,585	0/0:28,0:28:84.28:0,84,1241	0/0:37,0:37:99:0,111,1614	0/0:5,0:5:15.05:0,15,225
chr10	60404469	.	CT	C	7677.79	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-9.967;DP=441;FS=1.052;HRun=8;HaplotypeScore=81.4690;InbreedingCoeff=0.8837;MQ=74.02;MQ0=1;MQRankSum=0.950;QD=23.41;ReadPosRankSum=3.717;VQSLOD=5.4189;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,24:24:63.10:608,63,0	1/1:0,8:8:24.04:232,24,0	0/0:25,0:19:0.32:0,0,66	0/0:15,0:9:0.56:0,1,66	1/1:1,27:28:72.03:678,72,0	0/0:20,0:20:58.66:0,59,366	0/0:6,0:6:8.77:0,9,52	0/0:26,0:26:61.96:0,62,449	1/1:1,13:14:33.05:319,33,0	1/1:1,15:16:45.06:430,45,0	1/1:5,21:27:50.05:460,50,0	1/1:0,9:9:21.03:203,21,0	1/1:0,8:8:24.04:232,24,0	1/1:0,14:14:27.04:261,27,0	1/1:3,15:18:45.07:435,45,0	1/1:1,10:11:18.03:174,18,0	1/1:1,16:17:45.07:435,45,0	1/1:1,7:8:14.80:144,15,0	1/1:8,19:27:57.02:530,57,0	1/1:1,24:25:68.95:632,69,0	1/1:0,8:8:18.03:174,18,0	0/0:7,0:7:11.84:0,12,106	0/0:9,0:9:18.09:0,18,112	0/0:5,0:5:14.62:0,15,86	1/1:0,19:19:48.08:464,48,0	1/1:1,18:19:54.09:521,54,0	1/1:1,21:22:60.09:578,60,0	1/1:0,6:6:18.03:172,18,0
chr10	60404477	.	T	TA	2021.60	PASS	AB=1.000;AC=14;AF=0.250;AN=56;BaseQRankSum=-10.001;DP=446;FS=1.686;HRun=3;HaplotypeScore=107.1541;InbreedingCoeff=0.7796;MQ=73.83;MQ0=2;MQRankSum=0.284;QD=17.43;ReadPosRankSum=-2.577;VQSLOD=2.6687;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:60.62:0,61,326	0/0:8,0:8:23.22:0,23,127	0/1:24,0:16:8.68:9,0,115	0/1:17,0:9:15.09:15,0,61	0/0:30,0:30:78.67:0,79,448	1/1:1,21:22:54.18:729,54,0	1/1:0,5:5:9.03:122,9,0	1/1:1,23:24:69.14:815,69,0	0/0:14,0:14:34.93:0,35,200	0/0:15,0:15:40.63:0,41,223	0/0:24,0:24:52.30:0,52,290	0/0:10,0:10:23.32:0,23,137	0/0:9,0:9:26.22:0,26,152	0/0:15,0:15:29.12:0,29,168	0/0:15,0:15:43.54:0,44,238	0/0:10,0:10:17.42:0,17,95	0/0:17,0:17:46.50:0,46,260	0/0:8,0:8:7.31:0,7,70	0/0:25,0:25:58.21:0,58,342	0/0:25,0:25:61.08:0,61,346	0/0:10,0:10:23.41:0,23,147	1/1:1,7:8:11.78:112,12,0	1/1:1,9:10:15.05:203,15,0	1/1:0,5:5:15.05:203,15,0	0/0:22,0:22:52.44:0,52,306	0/0:21,0:21:58.09:0,58,336	0/0:21,0:21:58.02:0,58,317	0/0:6,0:6:17.42:0,17,96
chr10	60405712	.	GT	G	1185.04	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=5.626;DP=481;FS=38.773;HRun=5;HaplotypeScore=72.3566;InbreedingCoeff=0.9474;MQ=52.68;MQ0=14;MQRankSum=-8.175;QD=21.55;ReadPosRankSum=-2.441;VQSLOD=0.8003;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:37.39:0,37,849	0/0:8,0:8:18.06:0,18,239	0/0:21,3:7:12.04:0,12,154	0/0:28,3:7:8.99:0,9,91	0/0:20,0:19:48.15:0,48,639	1/1:2,11:12:33.09:372,33,0	1/1:0,6:6:18.05:199,18,0	1/1:5,5:10:24.04:254,24,0	0/0:16,0:16:39.13:0,39,533	0/0:24,0:23:66.21:0,66,885	0/0:25,0:23:53.25:0,53,757	0/0:20,0:20:54.09:0,54,696	0/0:17,0:17:42.14:0,42,573	0/0:10,0:10:30.09:0,30,395	0/0:15,0:15:42.14:0,42,574	0/0:15,0:15:39.13:0,39,534	0/0:19,0:19:45.15:0,45,615	0/0:13,0:13:7.76:0,8,461	0/0:16,0:11:33.08:0,33,432	0/0:37,0:37:87.25:0,87,1179	0/0:14,0:14:42.14:0,42,574	1/1:1,5:5:15.04:170,15,0	1/1:4,10:10:24.07:272,24,0	1/1:0,6:6:9.03:102,9,0	0/0:15,0:15:42.10:0,42,549	0/0:26,0:26:75.24:0,75,1010	0/0:23,0:23:60.19:0,60,805	0/0:11,0:11:24.08:0,24,328
chr10	60405753	.	A	ATTT	14901.46	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-5.258;DP=468;FS=9.151;HRun=9;HaplotypeScore=81.6760;InbreedingCoeff=0.7094;MQ=71.77;MQ0=5;MQRankSum=-4.973;QD=35.91;ReadPosRankSum=2.115;VQSLOD=3.7615;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,17:25:51.11:907,51,0	1/1:1,9:12:27.07:496,27,0	0/0:26,0:15:0.88:0,1,90	0/0:24,0:14:21.50:0,21,154	1/1:0,20:22:57.19:1029,57,0	1/1:5,0:11:28.09:332,28,0	1/1:5,0:7:17.35:173,17,0	1/1:10,2:12:21.04:293,21,0	1/1:1,16:18:45.13:830,45,0	1/1:8,12:24:53.99:750,54,0	1/1:5,20:28:62.96:911,63,0	1/1:3,18:22:48.16:930,48,0	1/1:3,12:16:14.63:295,15,0	1/1:0,8:9:24.06:437,24,0	1/1:3,8:12:18.04:319,18,0	1/1:1,8:11:27.05:460,27,0	1/1:2,13:15:24.08:473,24,0	1/1:3,3:6:9.03:173,9,0	1/1:5,7:12:21.02:309,21,0	1/1:5,23:32:78.07:1261,78,0	1/1:0,6:7:21.07:398,21,0	1/1:7,0:11:19.72:256,20,0	1/1:5,0:10:21.06:276,21,0	1/1:3,0:4:3.01:43,3,0	1/1:2,13:19:42.12:755,42,0	1/1:6,22:31:78.23:1399,78,0	1/1:1,25:29:66.20:1235,66,0	1/1:2,5:8:9.03:161,9,0
chr10	60405784	.	CTT	C	1515.43	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=0.908;DP=385;FS=0.000;HRun=6;HaplotypeScore=83.5130;InbreedingCoeff=0.8701;MQ=62.87;MQ0=1;MQRankSum=-5.764;QD=27.55;ReadPosRankSum=-0.126;VQSLOD=2.8804;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:45.12:0,45,775	0/0:12,0:12:36.10:0,36,616	0/0:6,0:3:9.03:0,9,162	0/1:7,0:7:4.01:4,0,200	0/0:21,0:21:60.19:0,60,1050	1/1:0,12:12:27.09:359,27,0	1/1:1,3:4:12.04:153,12,0	1/1:1,9:10:27.07:344,27,0	0/0:15,0:15:45.15:0,45,783	0/0:22,0:22:63.22:0,63,1126	0/0:29,0:29:78.25:0,78,1346	0/0:17,0:17:48.16:0,48,834	0/0:13,0:13:21.07:0,21,378	0/0:11,0:11:27.09:0,27,486	0/0:10,0:10:15.04:0,15,238	0/0:7,0:7:18.06:0,18,324	0/0:16,0:16:45.12:0,45,777	0/0:2,0:2:6.02:0,6,108	0/0:13,0:13:33.07:0,33,475	0/0:23,0:23:60.21:0,60,1078	0/0:6,0:6:18.05:0,18,297	1/1:0,9:9:27.09:359,27,0	1/1:1,9:10:27.09:359,27,0	1/1:0,3:3:9.03:119,9,0	0/0:22,0:22:54.13:0,54,859	0/0:28,0:28:81.26:0,81,1428	0/0:30,0:30:78.26:0,78,1374	0/0:6,0:6:18.06:0,18,324
chr10	60406067	.	T	TA	20666.37	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-6.336;DP=606;FS=13.725;HRun=3;HaplotypeScore=55.1758;InbreedingCoeff=0.9901;MQ=62.27;MQ0=1;MQRankSum=-0.149;QD=36.64;ReadPosRankSum=5.689;VQSLOD=3.7822;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,30:32:81.27:1132,81,0	1/1:1,6:7:15.05:210,15,0	0/0:19,0:16:39.08:0,39,441	0/0:23,0:19:51:0,51,565	1/1:0,31:31:87.29:1218,87,0	1/1:1,22:23:60.20:840,60,0	1/1:1,13:14:30.10:420,30,0	1/1:5,17:22:57.19:795,57,0	1/1:2,26:28:69.23:966,69,0	1/1:0,32:32:96.28:1294,96,0	1/1:2,25:27:72.24:1008,72,0	1/1:0,19:19:54.18:756,54,0	1/1:0,15:15:42.14:588,42,0	1/1:2,11:13:24.08:336,24,0	1/1:3,19:22:54.18:756,54,0	1/1:1,16:17:48.16:672,48,0	1/1:0,28:28:72.24:1007,72,0	1/1:1,17:18:42.14:587,42,0	1/1:3,14:17:39.13:546,39,0	1/1:1,33:34:99:1385,99,0	1/1:0,19:19:51.17:714,51,0	1/1:1,15:16:45.15:630,45,0	1/1:0,19:19:51.17:714,51,0	1/1:1,11:12:33.04:433,33,0	1/1:2,26:28:46.45:901,46,0	1/1:1,26:27:78.25:1075,78,0	1/1:3,31:34:90.30:1260,90,0	1/1:0,10:10:30.10:420,30,0
chr10	60406560	.	A	AT	4066.59	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=0.118;DP=613;FS=0.000;HRun=7;HaplotypeScore=64.6747;InbreedingCoeff=0.9977;MQ=60.43;MQ0=1;MQRankSum=1.114;QD=29.26;ReadPosRankSum=-1.261;VQSLOD=3.6257;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:31:77.13:0,77,720	0/0:8,0:8:24.04:0,24,232	0/0:17,0:12:30.03:0,30,281	0/0:15,0:10:23.58:0,24,203	0/0:35,0:34:93.15:0,93,898	1/1:5,25:30:75.19:890,75,0	1/1:2,13:15:33.10:399,33,0	1/1:2,27:27:75.13:869,75,0	0/0:22,0:22:63.10:0,63,608	0/0:29,0:29:72.10:0,72,690	0/0:27,0:27:66.08:0,66,632	0/0:16,0:16:39.06:0,39,376	0/0:17,0:17:45.04:0,45,428	0/0:21,0:21:57.08:0,57,545	0/0:26,0:26:75.12:0,75,724	0/0:19,0:19:51.05:0,51,483	0/0:30,0:30:81.12:0,81,781	0/0:27,0:27:69.03:0,69,646	0/0:18,0:17:48.07:0,48,459	0/0:30,0:30:84.12:0,84,806	0/0:18,0:19:56.12:0,56,527	1/1:6,26:32:75.23:906,75,0	1/1:1,19:20:60.17:713,60,0	1/1:2,11:13:24.07:290,24,0	0/0:16,0:16:48.07:0,48,459	0/0:19,0:19:48.07:0,48,463	0/0:24,0:24:57.07:0,57,546	0/0:8,0:8:21.03:0,21,203
chr10	60407742	.	T	TA	3433.21	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-6.583;DP=575;FS=4.431;HRun=6;HaplotypeScore=55.7159;InbreedingCoeff=0.9636;MQ=62.44;MQ0=3;MQRankSum=-1.075;QD=32.09;ReadPosRankSum=-0.822;VQSLOD=3.8122;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,99,964	0/0:13,0:13:30.06:0,30,306	0/0:16,0:11:29.71:0,30,272	0/0:20,0:16:42.09:0,42,421	0/0:35,0:35:96.21:0,96,979	1/1:1,20:21:60.19:755,60,0	1/1:0,8:8:21.07:264,21,0	1/1:4,20:24:60.16:719,60,0	0/0:19,0:19:54.11:0,54,544	0/0:22,0:22:60.13:0,60,608	0/0:33,0:33:99:0,99,1009	0/0:20,0:20:48.09:0,48,483	0/0:14,0:14:36.08:0,36,367	0/0:12,0:12:36.06:0,36,360	0/0:13,0:13:39.05:0,39,388	0/0:9,0:9:27.06:0,27,275	0/0:28,0:28:71.92:0,72,684	0/0:13,0:13:24.05:0,24,245	0/0:24,0:24:63.13:0,63,637	0/0:39,0:39:99:0,114,1155	0/0:6,0:6:15.03:0,15,153	1/1:1,22:23:66.17:812,66,0	1/1:2,18:20:48.62:604,49,0	1/1:2,9:11:3.92:279,4,0	0/0:24,0:24:69.16:0,69,703	0/0:27,0:27:72.12:0,72,720	0/0:33,0:33:90.20:0,90,916	0/0:13,0:13:27.06:0,27,275
chr10	60410447	.	GAA	G	4616.67	PASS	AB=1.000;AC=39;AF=0.696;AN=56;BaseQRankSum=-8.849;DP=492;FS=18.176;HRun=5;HaplotypeScore=80.3283;InbreedingCoeff=0.8805;MQ=84.69;MQ0=20;MQRankSum=-1.858;QD=16.67;ReadPosRankSum=4.719;VQSLOD=1.2303;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:21:13.50:304,13,0	1/1:4,0:4:8.95:69,9,0	0/0:49,0:23:30.93:0,31,371	0/0:67,0:36:34.52:0,35,445	1/1:17,0:17:5.75:36,6,0	0/0:15,0:14:36.02:0,36,348	0/0:21,0:20:53.70:0,54,539	0/0:19,0:17:39.46:0,39,407	1/1:12,0:12:26.94:216,27,0	1/1:14,0:14:41.75:365,42,0	1/1:14,0:14:20.47:160,20,0	1/1:11,0:11:29.91:243,30,0	1/1:10,0:10:29.55:231,30,0	1/1:11,0:11:26.95:219,27,0	1/1:16,0:16:38.94:320,39,0	1/1:7,0:7:3:26,3,0	1/1:23,0:21:45.81:331,46,0	1/1:16,0:16:18.26:237,18,0	1/1:1,15:16:44.03:350,44,0	1/1:15,0:13:26.11:196,26,0	1/1:23,0:22:50.75:429,51,0	0/0:12,0:12:35.83:0,36,308	0/0:17,0:17:41.95:0,42,360	0/0:14,0:14:32.80:0,33,300	1/1:15,0:14:35.94:301,36,0	1/1:11,0:10:30:270,30,0	1/1:12,0:12:35.85:281,36,0	0/1:9,0:3:3.66:34,0,4
chr10	60410449	.	AAAAG	A	4430.85	PASS	AB=1.000;AC=37;AF=0.661;AN=56;BaseQRankSum=-9.905;DP=500;FS=23.949;HRun=0;HaplotypeScore=98.2436;InbreedingCoeff=0.7330;MQ=81.56;MQ0=24;MQRankSum=-2.193;QD=15.38;ReadPosRankSum=5.265;VQSLOD=2.7336;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:21,0:21:17.34:290,0,17	0/1:3,0:3:7.09:41,0,7	0/0:48,0:22:30.93:0,31,371	0/0:66,0:34:34.99:0,35,446	1/1:3,14:17:5.75:36,6,0	0/0:15,0:14:36.04:0,36,405	0/0:22,0:21:54.93:0,55,609	0/0:18,0:16:39.50:0,39,407	1/1:13,0:13:25.99:214,26,0	1/1:15,0:15:44.59:379,45,0	1/1:8,7:15:19.83:159,20,0	1/1:13,0:12:28.85:265,29,0	1/1:10,0:10:29.55:231,30,0	1/1:11,0:11:26.93:220,27,0	1/1:15,0:15:38.94:320,39,0	1/1:2,6:8:1.92:56,2,0	1/1:21,1:20:19.39:281,19,0	1/1:14,0:17:12.58:231,13,0	1/1:16,0:16:21.77:269,22,0	1/1:16,0:14:24.04:193,24,0	1/1:23,0:22:50.62:423,51,0	0/0:13,0:13:36.72:0,37,334	0/0:16,0:16:41.96:0,42,385	0/0:14,0:14:30.70:0,31,336	1/1:17,0:15:35.94:301,36,0	1/1:12,0:11:16.96:207,17,0	1/1:12,0:12:35.85:281,36,0	0/1:11,0:3:7.52:34,0,8
chr10	60410884	.	AACGG	A	5746	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=13.207;DP=535;FS=6.563;HRun=0;HaplotypeScore=97.2222;InbreedingCoeff=0.9928;MQ=79.93;MQ0=0;MQRankSum=-8.103;QD=43.53;ReadPosRankSum=-1.176;VQSLOD=4.6925;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:54.19:0,54,1405	0/0:8,0:8:18.06:0,18,474	0/0:23,0:23:51.12:0,51,1178	0/0:11,0:11:30.10:0,30,732	0/0:19,0:19:45.12:0,45,1089	1/1:5,30:35:81.28:1512,81,0	1/1:2,6:8:18.06:336,18,0	1/1:2,22:24:60.21:1100,60,0	0/0:24,0:24:69.24:0,69,1794	0/0:17,0:17:48.16:0,48,1279	0/0:17,0:17:42.14:0,42,1102	0/0:17,0:17:48.16:0,48,1279	0/0:17,0:17:48.16:0,48,1237	0/0:13,0:13:36.12:0,36,924	0/0:20,0:20:51.17:0,51,1314	0/0:13,0:13:33.11:0,33,865	0/0:19,0:19:54.19:0,54,1381	0/0:10,0:9:24.08:0,24,638	0/0:15,0:15:33.10:0,33,815	0/0:48,0:48:99:0,123,3251	0/0:18,0:18:51.18:0,51,1360	1/1:2,16:18:42.14:784,42,0	1/1:4,28:32:75.26:1399,75,0	1/1:1,14:15:33.11:616,33,0	0/0:19,0:19:54.19:0,54,1440	0/0:16,0:16:45.15:0,45,1199	0/0:32,0:32:90.31:0,90,2391	0/0:6,0:6:15.01:0,15,339
chr10	60411499	.	AG	A	2607.49	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=13.825;DP=559;FS=10.445;HRun=1;HaplotypeScore=98.0540;InbreedingCoeff=0.9991;MQ=57.80;MQ0=1;MQRankSum=-6.005;QD=23.92;ReadPosRankSum=-2.238;VQSLOD=2.1352;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:57.19:0,57,904	0/0:9,0:9:27.06:0,27,406	0/0:23,0:22:65.79:0,66,980	0/0:9,0:8:22.84:0,23,292	0/0:29,0:29:84.26:0,84,1318	1/1:0,15:15:39.07:396,39,0	1/1:1,11:12:36:338,36,0	1/1:0,23:20:54.06:514,54,0	0/0:18,0:18:54.18:0,54,861	0/0:28,0:28:84.29:0,84,1339	0/0:18,0:18:54.18:0,54,863	0/0:20,0:20:57.18:0,57,885	0/0:18,0:18:51.17:0,51,815	0/0:14,0:14:42.14:0,42,671	0/0:23,0:23:66.23:0,66,1053	0/0:19,0:19:57.19:0,57,911	0/0:19,0:19:54.18:0,54,861	0/0:16,0:16:48.08:0,48,713	0/0:24,0:24:69.24:0,69,1103	0/0:31,0:31:93.32:0,93,1485	0/0:23,0:23:66.23:0,66,1055	1/1:2,25:27:80.89:769,81,0	1/1:2,17:19:47.84:449,48,0	1/1:0,13:13:32.99:330,33,0	0/0:20,0:20:60.20:0,60,955	0/0:28,0:28:81.27:0,81,1273	0/0:27,0:27:78.27:0,78,1245	0/0:13,0:13:39.13:0,39,610
chr10	60411501	.	TC	T	2193.48	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=14.830;DP=563;FS=16.365;HRun=2;HaplotypeScore=101.5258;InbreedingCoeff=0.9975;MQ=57.62;MQ0=1;MQRankSum=-3.369;QD=20.12;ReadPosRankSum=-2.254;VQSLOD=2.1202;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:60.17:0,60,847	0/0:9,0:9:27.09:0,27,404	0/0:22,0:21:62.78:0,63,846	0/0:9,0:8:17.15:0,17,255	0/0:29,0:29:87.27:0,87,1264	1/1:3,12:15:38.98:345,39,0	1/1:2,11:13:35.92:305,36,0	1/1:1,20:18:44.95:376,45,0	0/0:18,0:18:51.17:0,51,764	0/0:30,0:30:87.25:0,87,1204	0/0:18,0:18:54.18:0,54,809	0/0:19,0:19:51.17:0,51,764	0/0:18,0:18:51.15:0,51,726	0/0:14,0:14:42.12:0,42,590	0/0:23,0:23:63.20:0,63,925	0/0:19,0:19:57.18:0,57,834	0/0:20,0:20:57.11:0,57,804	0/0:15,0:15:45.10:0,45,624	0/0:25,0:25:72.20:0,72,1020	0/0:31,0:31:90.25:0,90,1322	0/0:23,0:23:69.23:0,69,1033	1/1:3,25:28:83.68:685,84,0	1/1:2,17:19:47.69:388,48,0	1/1:2,11:13:32.90:283,33,0	0/0:20,0:20:54.18:0,54,809	0/0:28,0:28:81.27:0,81,1214	0/0:28,0:28:81.27:0,81,1212	0/0:13,0:13:27.09:0,27,404
chr10	60411961	.	C	CTTTTT	2961.84	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=4.406;DP=403;FS=4.552;HRun=8;HaplotypeScore=77.4010;InbreedingCoeff=0.9687;MQ=72.91;MQ0=0;MQRankSum=-9.794;QD=37.97;ReadPosRankSum=-5.400;VQSLOD=0.4309;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:93.20:0,93,1558	0/0:8,0:8:21.06:0,21,354	0/0:16,0:15:24.02:0,24,404	0/0:14,0:13:29.85:0,30,424	0/0:13,0:14:42.14:0,42,694	1/1:6,0:11:26.45:587,26,0	1/1:3,4:10:18.06:474,18,0	1/1:9,5:12:27.52:595,28,0	0/0:9,0:9:21.07:0,21,360	0/0:13,0:13:27.07:0,27,462	0/0:13,0:13:36.11:0,36,611	0/0:13,0:13:30.07:0,30,511	0/0:12,0:12:36.12:0,36,611	0/0:10,0:10:27.07:0,27,462	0/0:14,0:14:36.05:0,36,559	0/0:7,0:7:21.07:0,21,360	0/0:24,0:24:63.17:0,63,1071	0/0:3,0:3:9.03:0,9,154	0/0:15,0:15:42.12:0,42,714	0/0:26,0:26:69.18:0,69,1169	0/0:13,0:12:39.13:0,39,668	1/1:9,4:16:30.10:729,30,0	1/1:6,1:14:27.05:583,27,0	1/1:4,1:8:8.99:178,9,0	0/0:6,0:6:18.06:0,18,308	0/0:13,0:13:36.12:0,36,617	0/0:28,0:28:72.19:0,72,1215	0/0:15,0:14:39.12:0,39,668
chr10	60412242	.	C	CTT	2746.28	PASS	AC=12;AF=0.222;AN=54;BaseQRankSum=9.015;DP=483;FS=43.292;HRun=1;HaplotypeScore=63.8629;InbreedingCoeff=0.9362;MQ=58.81;MQ0=3;MQRankSum=-10.574;QD=35.67;ReadPosRankSum=-3.638;VQSLOD=0.7559;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:41:58.28:0,58,1100	0/0:5,0:5:15.05:0,15,230	0/0:15,0:9:24.08:0,24,340	0/0:22,0:9:22.62:0,23,305	0/0:14,0:14:30.10:0,30,454	1/1:1,7:8:24.08:446,24,0	1/1:3,14:15:36.08:603,36,0	1/1:2,12:14:38.62:703,39,0	0/0:20,0:20:60.20:0,60,917	0/0:8,0:8:21.07:0,21,320	0/0:11,0:10:18.06:0,18,274	0/0:19,0:19:0.06:0,0,727	0/0:15,0:15:41.87:0,42,601	0/0:12,0:12:33.11:0,33,505	0/0:26,0:26:75.24:0,75,1126	0/0:16,0:16:42.13:0,42,621	0/0:24,0:24:60.19:0,60,892	0/0:34,1:34:35.34:0,35,1267	0/0:20,0:19:54.18:0,54,826	0/0:14,0:13:36.12:0,36,551	0/0:43,0:43:99:0,111,1667	1/1:2,12:14:41.93:620,42,0	1/1:3,8:11:18.06:343,18,0	1/1:2,9:8:14.95:213,15,0	0/0:10,0:10:30.09:0,30,439	0/0:18,0:18:54.18:0,54,806	0/0:17,0:17:51.17:0,51,779	./.
chr10	60412324	.	CAG	C	4598.60	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=11.020;DP=540;FS=3.585;HRun=0;HaplotypeScore=72.3070;InbreedingCoeff=0.9833;MQ=81.32;MQ0=0;MQRankSum=-1.708;QD=37.09;ReadPosRankSum=0.719;VQSLOD=7.0275;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,108,1963	0/0:5,0:5:15.05:0,15,281	0/0:20,0:20:57.17:0,57,954	0/0:24,0:23:38:0,38,868	0/0:13,0:13:39.13:0,39,730	1/1:0,21:21:54.18:795,54,0	1/1:2,19:21:47.76:698,48,0	1/1:4,25:29:72.22:1033,72,0	0/0:18,0:18:54.17:0,54,958	0/0:8,0:7:21.07:0,21,392	0/0:14,0:14:42.14:0,42,786	0/0:13,0:13:30.10:0,30,562	0/0:20,0:20:48.16:0,48,876	0/0:20,0:20:57.20:0,57,1054	0/0:24,0:24:63.20:0,63,1148	0/0:20,0:20:57.20:0,57,1067	0/0:26,0:26:69.24:0,69,1279	0/0:33,0:33:96.29:0,96,1688	0/0:16,0:16:45.15:0,45,843	0/0:15,0:15:42.14:0,42,787	0/0:16,0:16:45.14:0,45,803	1/1:1,25:26:78.26:1146,78,0	1/1:0,9:9:21.07:309,21,0	1/1:1,17:18:42.14:618,42,0	0/0:13,0:13:36.12:0,36,666	0/0:22,0:22:66.23:0,66,1213	0/0:26,0:25:69.21:0,69,1218	0/0:6,0:6:9.03:0,9,168
chr10	60412777	.	T	TCCTTGCA	5705.21	PASS	AB=0.807;AC=6;AF=0.107;AN=56;BaseQRankSum=8.772;DP=767;FS=8.200;HRun=0;HaplotypeScore=191.9468;InbreedingCoeff=-0.1201;MQ=79.19;MQ0=0;MQRankSum=-9.769;QD=30.19;ReadPosRankSum=1.847;VQSLOD=3.5476;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,114,3054	0/0:10,0:10:30.10:0,30,766	0/0:18,0:18:48.13:0,48,1083	0/0:33,0:33:96.31:0,96,2370	0/0:41,0:41:99:0,117,3232	0/1:29,11:40:99:1320,0,2121	0/1:17,6:22:99:640,0,841	0/1:29,5:34:99:670,0,2223	0/0:32,0:32:96.31:0,96,2558	0/0:36,0:36:99:0,105,2898	0/0:30,0:30:87.30:0,87,2403	0/0:15,0:15:45.15:0,45,1245	0/0:33,0:33:96.33:0,96,2602	0/0:14,0:14:39.11:0,39,952	0/0:34,0:34:99:0,102,2788	0/0:20,0:20:60.20:0,60,1608	0/0:32,0:32:93.29:0,93,2475	0/0:18,0:18:54.19:0,54,1442	0/0:22,0:22:66.23:0,66,1801	0/0:30,0:30:90.27:0,90,2399	0/0:25,0:25:75.26:0,75,2049	0/1:25,9:35:99:1121,0,1874	0/1:23,10:33:99:1278,0,1525	0/1:18,5:24:99:677,0,786	0/0:24,0:24:72.25:0,72,1975	0/0:27,0:27:81.28:0,81,2249	0/0:38,0:37:99:0,111,2817	0/0:8,0:8:24.06:0,24,609
chr10	60412784	.	GC	G	879.25	PASS	AB=0.796;AC=5;AF=0.089;AN=56;BaseQRankSum=11.118;DP=736;FS=12.809;HRun=3;HaplotypeScore=102.5876;InbreedingCoeff=-0.1016;MQ=79.78;MQ0=0;MQRankSum=-9.609;QD=5.43;ReadPosRankSum=-1.402;VQSLOD=-0.6369;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,111,1575	0/0:9,0:9:27.09:0,27,388	0/0:17,0:17:29.89:0,30,596	0/0:32,0:33:77.39:0,77,1118	0/0:38,0:38:99:0,108,1533	0/1:29,11:40:99:285,0,1131	0/1:14,6:19:99:133,0,467	0/1:32,5:37:73.18:73,0,1266	0/0:29,0:29:87.29:0,87,1253	0/0:36,0:36:99:0,102,1435	0/0:26,0:26:69.23:0,69,991	0/0:13,0:13:39.13:0,39,561	0/0:36,0:36:99:0,105,1484	0/0:12,0:12:36.12:0,36,519	0/0:35,0:35:99:0,102,1467	0/0:17,0:17:51.17:0,51,735	0/0:31,0:31:87.29:0,87,1253	0/0:19,0:19:57.19:0,57,820	0/0:21,0:21:63.19:0,63,870	0/0:27,0:27:75.25:0,75,1079	0/0:21,0:21:63.20:0,63,888	0/1:26,9:35:99:228,0,974	0/1:20,10:30:99:278,0,748	0/0:16,5:21:7.31:0,7,603	0/0:26,0:26:78.23:0,78,1087	0/0:24,0:24:69.23:0,69,993	0/0:37,0:36:99:0,111,1562	0/0:8,0:8:24.08:0,24,346
chr10	60412820	.	GA	G	3603.68	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=11.910;DP=662;FS=1.698;HRun=7;HaplotypeScore=66.8887;InbreedingCoeff=0.9985;MQ=82.08;MQ0=0;MQRankSum=-2.244;QD=26.30;ReadPosRankSum=-1.109;VQSLOD=3.9694;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:96.29:0,96,1195	0/0:9,0:9:27.09:0,27,340	0/0:26,0:26:63.19:0,63,776	0/0:32,0:32:71.21:0,71,849	0/0:44,0:44:99:0,126,1522	1/1:1,28:29:75.17:765,75,0	1/1:0,17:17:42.10:428,42,0	1/1:5,24:29:72.15:728,72,0	0/0:26,0:26:75.22:0,75,930	0/0:32,0:32:90.29:0,90,1128	0/0:19,0:19:57.17:0,57,705	0/0:22,0:22:60.18:0,60,741	0/0:31,0:31:87.26:0,87,1071	0/0:11,0:11:33.10:0,33,403	0/0:21,0:21:60.18:0,60,743	0/0:13,0:13:39.12:0,39,491	0/0:23,0:23:57.18:0,57,717	0/0:28,0:28:69.22:0,69,867	0/0:31,0:31:90.26:0,90,1106	0/0:23,0:23:60.19:0,60,755	0/0:9,0:9:24.06:0,24,288	1/1:1,26:27:72.16:734,72,0	1/1:0,21:21:53.93:551,54,0	1/1:1,13:14:39.09:398,39,0	0/0:25,0:25:72.23:0,72,906	0/0:25,0:25:69.22:0,69,865	0/0:34,0:33:93.28:0,93,1154	0/0:7,0:7:21.07:0,21,264
chr10	60421103	.	GAGA	G	14178.81	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=5.968;DP=462;FS=6.781;HRun=0;HaplotypeScore=77.6247;InbreedingCoeff=0.9955;MQ=66.70;MQ0=0;MQRankSum=-2.732;QD=45.16;ReadPosRankSum=6.525;VQSLOD=6.0631;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,26:26:69.14:1112,69,0	1/1:0,6:6:18.06:307,18,0	0/0:9,0:9:20.09:0,20,452	0/0:17,0:17:41.99:0,42,792	1/1:0,19:19:51.17:868,51,0	0/0:27,0:27:78.05:0,78,1470	0/0:24,0:24:66.23:0,66,1503	0/0:32,0:32:93.31:0,93,2012	1/1:0,17:17:51.17:868,51,0	1/1:0,22:22:66.18:1040,66,0	1/1:0,17:17:45.15:766,45,0	1/1:0,19:19:51.17:868,51,0	1/1:1,14:15:36.12:612,36,0	1/1:1,12:13:33.07:530,33,0	1/1:0,18:18:54.18:919,54,0	1/1:0,13:13:36.12:613,36,0	1/1:0,15:15:33.11:562,33,0	1/1:0,7:7:21.07:358,21,0	1/1:0,11:11:33.06:501,33,0	1/1:0,16:16:39.13:657,39,0	1/1:0,14:14:33.11:562,33,0	0/0:12,0:12:33.04:0,33,660	0/0:14,0:14:42.11:0,42,917	0/0:13,0:13:39.10:0,39,847	1/1:1,12:13:36.12:613,36,0	1/1:0,17:17:51.11:786,51,0	1/1:1,27:28:81.21:1329,81,0	1/1:0,8:8:18.06:307,18,0
chr10	60422498	.	AAT	A	4490.75	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=14.152;DP=534;FS=1.296;HRun=0;HaplotypeScore=74.6574;InbreedingCoeff=0.9962;MQ=79.92;MQ0=0;MQRankSum=-2.523;QD=37.11;ReadPosRankSum=-2.151;VQSLOD=6.3528;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:48.16:0,48,898	0/0:12,0:12:36.12:0,36,674	0/0:18,0:18:52.39:0,52,892	0/0:11,0:11:27.08:0,27,455	0/0:29,0:29:84.29:0,84,1573	1/1:1,11:12:30.10:442,30,0	1/1:1,6:7:15.05:221,15,0	1/1:4,32:36:96.29:1352,96,0	0/0:19,0:19:54.19:0,54,1011	0/0:26,0:26:75.25:0,75,1373	0/0:38,0:38:99:0,108,1990	0/0:19,0:19:57.18:0,57,1036	0/0:10,0:10:30.09:0,30,530	0/0:11,0:11:33.11:0,33,618	0/0:19,0:19:57.20:0,57,1061	0/0:12,0:12:36.12:0,36,674	0/0:24,0:24:72.11:0,72,1228	0/0:18,0:18:51.17:0,51,924	0/0:16,0:16:48.16:0,48,898	0/0:22,0:22:63.20:0,63,1135	0/0:12,0:12:36.12:0,36,674	1/1:0,22:22:66.22:963,66,0	1/1:1,26:27:63.13:919,63,0	1/1:0,17:17:42.10:594,42,0	0/0:31,0:31:87.30:0,87,1629	0/0:17,0:17:51.17:0,51,916	0/0:18,0:17:54.19:0,54,1006	0/0:14,0:14:39.13:0,39,706
chr10	60423520	.	C	CT	4247.35	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=7.198;DP=582;FS=3.454;HRun=5;HaplotypeScore=62.5278;InbreedingCoeff=0.9845;MQ=83.78;MQ0=0;MQRankSum=0.632;QD=33.71;ReadPosRankSum=-1.960;VQSLOD=4.6628;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:66.16:0,66,709	0/0:5,0:5:9.02:0,9,97	0/0:16,0:16:45.09:0,45,468	0/0:19,0:19:49.63:0,50,505	0/0:31,0:31:84.21:0,84,903	1/1:5,25:30:75.24:987,75,0	1/1:1,15:16:39.13:513,39,0	1/1:3,26:29:78.21:971,78,0	0/0:23,0:23:63.14:0,63,669	0/0:32,0:32:87.21:0,87,928	0/0:31,0:31:90.19:0,90,950	0/0:10,0:10:27.07:0,27,290	0/0:16,0:16:45.11:0,45,484	0/0:25,0:25:69.15:0,69,733	0/0:19,0:19:57.14:0,57,613	0/0:19,0:19:54.14:0,54,580	0/0:18,0:18:48.09:0,48,505	0/0:11,0:11:21.05:0,21,226	0/0:20,0:20:48.09:0,48,501	0/0:42,0:42:99:0,111,1193	0/0:23,0:23:69.17:0,69,742	1/1:0,20:20:57.19:750,57,0	1/1:2,21:23:60.20:789,60,0	1/1:1,7:8:18.06:237,18,0	0/0:20,0:20:60.15:0,60,645	0/0:24,0:24:72.18:0,72,768	0/0:20,0:20:54.13:0,54,580	0/0:8,0:8:19.79:0,20,224
chr10	60423724	.	C	CATGT	8057.42	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-4.831;DP=710;FS=0.806;HRun=0;HaplotypeScore=117.3070;InbreedingCoeff=0.9944;MQ=84.65;MQ0=0;MQRankSum=-7.634;QD=54.08;ReadPosRankSum=-0.937;VQSLOD=5.6298;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:90.27:0,90,1598	0/0:6,0:6:18.06:0,18,336	0/0:29,0:29:72.24:0,72,1264	0/0:18,0:18:42.12:0,42,712	0/0:32,0:32:93.28:0,93,1656	1/1:5,19:24:39.13:1039,39,0	1/1:4,10:16:27.09:709,27,0	1/1:13,20:35:93.29:2277,93,0	0/0:38,0:38:99:0,108,1931	0/0:32,0:32:96.33:0,96,1790	0/0:29,0:29:87.28:0,87,1592	0/0:29,0:29:87.27:0,87,1553	0/0:13,0:13:39.12:0,39,695	0/0:20,0:20:60.21:0,60,1114	0/0:34,0:34:71.43:0,71,1722	0/0:19,0:19:48.15:0,48,865	0/0:21,0:21:57.03:0,57,1021	0/0:15,0:15:29.91:0,30,559	0/0:19,0:19:51.17:0,51,910	0/0:39,0:39:99:0,111,2064	0/0:44,0:44:99:0,114,2056	1/1:3,17:20:42.14:1119,42,0	1/1:5,27:32:72.25:1875,72,0	1/1:4,18:22:39.11:1039,39,0	0/0:32,0:32:96.33:0,96,1785	0/0:26,0:26:75.25:0,75,1371	0/0:24,0:24:63.22:0,63,1165	0/0:9,0:9:14.51:0,15,245
chr10	60424905	.	CA	C	9664.45	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-12.216;DP=513;FS=1.337;HRun=6;HaplotypeScore=61.5257;InbreedingCoeff=0.9886;MQ=72.48;MQ0=7;MQRankSum=-1.768;QD=26.19;ReadPosRankSum=5.227;VQSLOD=4.8648;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,22:24:56.21:611,56,0	1/1:1,6:7:15.04:161,15,0	0/0:10,0:10:24.03:0,24,280	0/0:14,0:13:17.30:0,17,334	1/1:2,11:11:30.07:322,30,0	0/0:27,0:27:66.21:0,66,866	0/0:19,0:19:45.15:0,45,589	0/0:25,0:25:66.20:0,66,834	1/1:4,21:25:57.14:613,57,0	1/1:2,27:26:72.18:773,72,0	1/1:0,12:11:30.07:322,30,0	1/1:1,17:17:48.12:516,48,0	1/1:3,13:16:39.09:419,39,0	1/1:1,15:16:36.09:387,36,0	1/1:2,14:15:42.10:451,42,0	1/1:4,13:15:36.09:387,36,0	1/1:0,15:15:33.08:355,33,0	1/1:0,6:6:12.03:129,12,0	1/1:1,41:40:99:1221,117,0	1/1:3,17:19:42.10:451,42,0	1/1:0,30:29:84.21:903,84,0	0/0:13,0:13:36.12:0,36,466	0/0:17,0:17:48.14:0,48,612	0/0:19,0:19:45.13:0,45,570	1/1:3,13:15:39.10:419,39,0	1/1:2,13:14:39.10:419,39,0	1/1:3,21:24:57.14:612,57,0	1/1:0,6:6:18.05:193,18,0
chr10	60424962	.	GT	G	3549.27	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-7.992;DP=407;FS=1.651;HRun=1;HaplotypeScore=66.7111;InbreedingCoeff=0.9851;MQ=80.17;MQ0=7;MQRankSum=-0.678;QD=38.58;ReadPosRankSum=0.485;VQSLOD=4.1796;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:17:45.13:0,45,694	0/0:4,0:4:9.02:0,9,121	0/0:10,0:10:24.08:0,24,384	0/0:15,0:15:36.67:0,37,544	0/0:18,0:16:48.16:0,48,763	1/1:0,24:24:69.23:965,69,0	1/1:0,10:10:27.09:378,27,0	1/1:0,19:19:57.18:780,57,0	0/0:14,0:14:36.12:0,36,570	0/0:23,0:20:57.19:0,57,890	0/0:14,0:13:36.12:0,36,575	0/0:11,0:10:30.09:0,30,454	0/0:15,0:15:42.14:0,42,671	0/0:8,0:8:24.08:0,24,380	0/0:11,0:10:24.08:0,24,384	0/0:14,0:12:27.09:0,27,432	0/0:15,0:15:39.13:0,39,615	0/0:9,0:9:24.08:0,24,384	0/0:22,0:21:63.16:0,63,958	0/0:18,0:17:51.16:0,51,777	0/0:23,0:22:66.23:0,66,1055	1/1:0,9:9:24.08:336,24,0	1/1:0,12:12:33.11:462,33,0	1/1:0,18:18:45.13:629,45,0	0/0:16,0:15:45.15:0,45,719	0/0:10,0:9:27.09:0,27,430	0/0:16,0:16:48.16:0,48,767	0/0:10,0:10:27.09:0,27,431
chr10	60425004	.	CT	C	5416.48	PASS	AB=0.907;AC=42;AF=0.750;AN=56;BaseQRankSum=-8.185;DP=380;FS=10.750;HRun=11;HaplotypeScore=52.1729;InbreedingCoeff=0.8384;MQ=68.04;MQ0=0;MQRankSum=0.777;QD=17.59;ReadPosRankSum=4.428;VQSLOD=5.1419;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,13:17:41.92:341,42,0	1/1:1,2:3:5.99:49,6,0	0/0:5,0:3:6:0,6,57	0/0:10,0:8:9.02:0,9,90	1/1:0,18:18:47.93:394,48,0	0/0:16,1:17:17.44:0,17,378	0/0:7,0:7:15.04:0,15,160	0/0:25,0:24:44.97:0,45,429	1/1:3,10:13:32.95:268,33,0	1/1:2,11:13:29.95:246,30,0	1/1:2,17:19:47.93:394,48,0	1/1:0,7:7:20.98:172,21,0	1/1:4,12:17:34.98:277,35,0	1/1:0,7:7:20.98:172,21,0	1/1:0,11:12:29.01:228,29,0	1/1:1,9:10:17.98:148,18,0	1/1:5,6:12:20.29:138,20,0	1/1:2,13:15:14.81:271,15,0	1/1:4,15:19:44.94:369,45,0	1/1:1,18:19:47.92:394,48,0	1/1:0,17:20:54.06:412,54,0	0/1:9,1:10:0.50:0,0,200	0/0:8,0:8:21.05:0,21,224	0/1:17,2:19:1.20:1,0,388	1/1:2,14:16:41.94:345,42,0	1/1:3,6:9:17.96:148,18,0	1/1:2,19:22:56.45:451,56,0	1/1:2,8:10:23.97:197,24,0
chr10	60425138	.	T	TC	1253.20	PASS	AC=40;AF=0.741;AN=54;BaseQRankSum=-6.100;DP=195;FS=9.571;HRun=8;HaplotypeScore=29.9151;InbreedingCoeff=0.6499;MQ=64.94;MQ0=2;MQRankSum=0.789;QD=11.09;ReadPosRankSum=-0.782;VQSLOD=0.4780;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,0:6:11.52:63,12,0	1/1:0,1:1:3.01:35,3,0	0/0:12,0:6:15:0,15,137	0/0:14,0:9:16.12:0,16,140	./.	0/0:10,0:10:23.89:0,24,220	0/0:13,0:13:36.01:0,36,329	1/1:10,0:8:2.97:20,3,0	1/1:5,0:5:6.02:69,6,0	1/1:2,3:5:3.01:35,3,0	1/1:2,6:9:12.04:139,12,0	1/1:0,3:3:3.01:35,3,0	1/1:0,3:3:3.01:35,3,0	1/1:2,3:5:3.01:35,3,0	1/1:2,3:5:10.27:106,10,0	1/1:2,6:7:9.03:104,9,0	1/1:2,5:6:12.04:138,12,0	1/1:3,3:6:11.71:115,12,0	1/1:3,4:7:12.04:137,12,0	1/1:1,3:4:6:57,6,0	1/1:3,9:12:9.03:104,9,0	0/0:10,0:10:24.01:0,24,220	0/0:12,0:12:24:0,24,219	0/0:8,0:8:18.01:0,18,164	1/1:1,2:3:3.01:35,3,0	1/1:2,1:3:3.01:35,3,0	1/1:1,6:6:9.03:104,9,0	1/1:0,2:2:3.01:35,3,0
chr10	60425309	.	G	GA	3516.35	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-12.369;DP=457;FS=6.136;HRun=6;HaplotypeScore=44.0611;InbreedingCoeff=0.9937;MQ=85.72;MQ0=0;MQRankSum=-1.100;QD=30.85;ReadPosRankSum=-2.659;VQSLOD=3.0121;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:45.08:0,45,451	0/0:6,0:6:18.02:0,18,176	0/0:19,0:18:39.08:0,39,394	0/0:13,0:13:19.67:0,20,251	0/0:15,0:15:45.10:0,45,459	1/1:0,19:19:51.16:641,51,0	1/1:0,12:12:21.07:264,21,0	1/1:5,38:43:99:1369,111,0	0/0:20,0:20:60.14:0,60,612	0/0:29,0:29:78.12:0,78,776	0/0:16,0:16:39.09:0,39,398	0/0:18,0:18:48.11:0,48,490	0/0:14,0:14:39.09:0,39,398	0/0:17,0:17:48.11:0,48,490	0/0:13,0:13:39.09:0,39,398	0/0:17,0:16:48.11:0,48,490	0/0:12,0:12:36.08:0,36,367	0/0:9,0:9:24.01:0,24,234	0/0:10,0:10:27.05:0,27,269	0/0:13,0:13:39.09:0,39,398	0/0:21,0:21:63.14:0,63,643	1/1:2,12:14:33.11:415,33,0	1/1:1,14:15:36.48:486,36,0	1/1:0,11:11:27.09:340,27,0	0/0:10,0:10:30.06:0,30,300	0/0:17,0:17:45.10:0,45,459	0/0:29,0:28:81.18:0,81,826	0/0:9,0:9:18.04:0,18,184
chr10	60425449	.	A	AT	13688.97	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-13.923;DP=558;FS=0.000;HRun=4;HaplotypeScore=60.0742;InbreedingCoeff=0.9723;MQ=91.81;MQ0=0;MQRankSum=-5.922;QD=36.70;ReadPosRankSum=4.725;VQSLOD=4.8015;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,16:16:42.14:574,42,0	1/1:0,5:5:9.03:123,9,0	0/0:30,0:30:86.57:0,87,929	0/0:21,0:21:51.10:0,51,553	1/1:0,13:13:39.13:533,39,0	0/0:31,0:31:90.24:0,90,1010	0/0:18,0:18:48.14:0,48,544	0/0:26,0:26:69.20:0,69,783	1/1:1,26:27:78.26:1067,78,0	1/1:2,27:29:81.27:1108,81,0	1/1:0,14:14:36.12:492,36,0	1/1:1,18:19:51.17:698,51,0	1/1:0,20:20:57.19:780,57,0	1/1:3,20:23:57.19:780,57,0	1/1:0,23:23:63.21:862,63,0	1/1:1,22:23:63.21:862,63,0	1/1:1,13:14:39.13:533,39,0	1/1:2,18:20:51.14:677,51,0	1/1:0,15:15:42.11:555,42,0	1/1:0,16:16:48.16:657,48,0	1/1:0,30:30:81.27:1108,81,0	0/0:24,0:24:63.17:0,63,705	0/0:22,0:22:54.15:0,54,612	0/0:13,0:13:36.10:0,36,408	1/1:1,7:8:21.03:266,21,0	1/1:0,18:18:48.14:639,48,0	1/1:2,36:38:96.12:1292,96,0	1/1:0,2:2:6.02:82,6,0
chr10	60428373	.	T	TAGGACC	29717.85	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-6.976;DP=633;FS=0.354;HRun=0;HaplotypeScore=134.8025;InbreedingCoeff=0.9659;MQ=56.13;MQ0=0;MQRankSum=-16.522;QD=66.33;ReadPosRankSum=0.683;VQSLOD=5.2886;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,27:47:87.21:2733,87,0	1/1:5,5:10:15.05:515,15,0	0/0:25,0:23:46:0,46,938	0/0:30,0:30:69.03:0,69,1412	1/1:5,15:19:21.07:696,21,0	0/0:18,0:18:45.15:0,45,1007	0/0:19,0:19:54.19:0,54,1182	0/0:35,0:35:90.30:0,90,1972	1/1:12,23:35:84.29:2643,84,0	1/1:14,19:33:69.24:2272,69,0	1/1:3,17:20:36.12:1219,36,0	1/1:6,19:26:54.14:1771,54,0	1/1:6,19:25:54.14:1742,54,0	1/1:7,20:28:57.20:1895,57,0	1/1:5,18:23:51.18:1702,51,0	1/1:6,15:22:54.19:1800,54,0	1/1:9,12:23:45.15:1523,45,0	1/1:3,8:11:21.07:722,21,0	1/1:13,10:23:45.14:1386,45,0	1/1:6,13:19:42.10:1338,42,0	1/1:6,13:19:17.94:580,18,0	0/0:14,0:14:39.13:0,39,874	0/0:24,0:24:69.24:0,69,1542	0/0:20,0:20:54.19:0,54,1192	1/1:3,19:22:60.21:2008,60,0	1/1:4,13:17:39.13:1317,39,0	1/1:7,17:24:54.19:1835,54,0	1/1:1,0:1:2.98:21,3,0
chr10	60429503	.	G	GA	10749.30	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-12.211;DP=568;FS=1.747;HRun=9;HaplotypeScore=51.8206;InbreedingCoeff=0.9776;MQ=56.52;MQ0=7;MQRankSum=4.296;QD=25.78;ReadPosRankSum=2.496;VQSLOD=5.4152;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,20:24:36.95:618,37,0	1/1:1,8:9:24.06:265,24,0	0/0:16,0:6:14.99:0,15,130	0/0:11,0:5:10.57:0,11,82	1/1:6,28:34:61.14:890,61,0	0/0:19,0:19:47.97:0,48,417	0/0:12,0:12:35.99:0,36,313	0/0:10,0:30:41.86:0,42,140	1/1:3,19:22:45.12:498,45,0	1/1:2,18:20:51.13:556,51,0	1/1:5,20:26:59.95:629,60,0	1/1:1,11:13:12.92:354,13,0	1/1:0,14:14:39.11:431,39,0	1/1:2,22:25:66.16:715,66,0	1/1:4,19:22:45.12:498,45,0	1/1:2,14:16:36.10:398,36,0	1/1:2,24:27:59.26:691,59,0	1/1:3,12:14:36.10:398,36,0	1/1:12,15:22:11.14:518,11,0	1/1:0,22:23:59.96:632,60,0	1/1:2,7:10:25.45:251,25,0	0/0:26,0:26:65.97:0,66,573	0/0:22,0:23:62.98:0,63,547	0/0:14,0:14:29.98:0,30,260	1/1:3,15:18:42.11:465,42,0	1/1:2,24:25:72.19:796,72,0	1/1:3,32:35:73.31:946,73,0	1/1:4,6:10:18.05:199,18,0
chr10	60431741	.	GA	G	11139.19	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=12.187;DP=602;FS=5.284;HRun=9;HaplotypeScore=89.7561;InbreedingCoeff=0.9248;MQ=58.25;MQ0=4;MQRankSum=0.645;QD=22.87;ReadPosRankSum=0.546;VQSLOD=5.3904;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,16:19:10.44:350,10,0	1/1:1,9:10:21.01:192,21,0	0/0:5,0:3:2.92:0,3,17	0/0:12,0:1:3.01:0,3,32	1/1:3,33:35:90.03:823,90,0	0/0:18,0:18:51.13:0,51,565	0/0:20,0:20:45.09:0,45,505	1/1:6,21:26:62.28:568,62,0	1/1:2,14:16:39.02:357,39,0	1/1:3,32:34:96.04:874,96,0	1/1:1,29:30:81.03:740,81,0	1/1:1,11:12:33.02:302,33,0	1/1:1,16:17:42.01:384,42,0	1/1:3,19:22:22.45:460,22,0	1/1:0,24:25:74.08:665,74,0	1/1:0,28:28:72.04:659,72,0	1/1:8,16:24:28:343,28,0	1/1:4,21:25:61.58:553,62,0	1/1:1,11:12:33.01:298,33,0	1/1:4,31:35:93.05:851,93,0	1/1:2,18:22:55.10:478,55,0	0/0:27,0:27:75.22:0,75,864	0/0:22,0:22:51.14:0,51,580	0/0:11,0:11:33.09:0,33,371	1/1:1,19:20:54.03:494,54,0	1/1:4,23:27:68.78:615,69,0	1/1:1,28:29:78.04:714,78,0	1/1:0,15:16:47.06:418,47,0
chr10	60433754	.	CA	C	2687.34	PASS	AB=0.920;AC=13;AF=0.232;AN=56;BaseQRankSum=10.513;DP=633;FS=4.604;HRun=10;HaplotypeScore=60.2841;InbreedingCoeff=0.8752;MQ=59.34;MQ0=5;MQRankSum=1.288;QD=16.19;ReadPosRankSum=-0.468;VQSLOD=3.9005;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,1:33:57.50:0,57,897	0/0:13,0:13:27.06:0,27,284	0/1:21,2:19:26.41:26,0,290	0/0:6,0:4:6.02:0,6,66	0/0:19,0:19:51.07:0,51,535	1/1:5,28:33:77.96:677,78,0	1/1:3,18:21:53.98:469,54,0	1/1:10,22:32:35.75:531,36,0	0/0:24,0:25:68.99:0,69,727	0/0:25,0:26:72.03:0,72,777	0/0:36,0:35:87.16:0,87,914	0/0:25,0:27:71.85:0,72,751	0/0:16,0:16:39.11:0,39,431	0/0:27,1:28:43.11:0,43,693	0/0:31,0:31:87.22:0,87,955	0/0:12,0:12:36.09:0,36,391	0/0:17,0:17:42.06:0,42,442	0/0:23,0:23:57.15:0,57,622	0/0:20,0:19:48.12:0,48,525	0/0:39,0:42:99:0,117,1227	0/0:25,0:25:66.17:0,66,722	1/1:1,24:25:59.97:521,60,0	1/1:3,17:20:26.59:392,27,0	1/1:1,11:12:29.99:260,30,0	0/0:15,0:15:39.08:0,39,411	0/0:23,0:23:60.16:0,60,664	0/0:26,0:25:66.17:0,66,723	0/0:4,0:4:12.03:0,12,133
chr10	60435051	.	TGATG	T	594.18	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.442;DP=612;FS=2.173;HRun=0;HaplotypeScore=99.1661;InbreedingCoeff=0.9699;MQ=87.16;MQ0=0;MQRankSum=-3.881;QD=37.14;ReadPosRankSum=-3.239;VQSLOD=3.2874;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,135,3776	0/0:11,0:11:33.11:0,33,885	0/0:25,0:26:66.13:0,66,1703	0/0:25,0:25:45.61:0,46,1817	0/0:36,0:36:99:0,105,2910	0/0:26,0:26:78.25:0,78,2122	0/0:27,0:27:81.28:0,81,2266	1/1:2,14:16:39.11:689,39,0	0/0:18,0:18:54.14:0,54,1444	0/0:27,0:26:81.28:0,81,2187	0/0:16,0:16:45.15:0,45,1244	0/0:15,0:15:45.15:0,45,1259	0/0:24,0:24:72.25:0,72,1972	0/0:17,0:17:51.18:0,51,1426	0/0:21,0:21:63.20:0,63,1703	0/0:24,0:24:72.25:0,72,1969	0/0:19,0:19:57.20:0,57,1568	0/0:15,0:14:45.12:0,45,1138	0/0:18,0:18:54.19:0,54,1505	0/0:32,0:32:96.33:0,96,2674	0/0:44,0:44:99:0,132,3560	0/0:21,0:21:60.21:0,60,1616	0/0:13,0:13:39.13:0,39,1076	0/0:19,0:19:57.20:0,57,1579	0/0:19,0:19:57.20:0,57,1594	0/0:19,0:19:57.20:0,57,1544	0/0:15,0:14:45.15:0,45,1230	0/0:4,0:4:12.04:0,12,335
chr10	60438119	.	C	CGT	1418.54	PASS	AB=0.774;AC=8;AF=0.143;AN=56;BaseQRankSum=-6.070;DP=638;FS=2.891;HRun=0;HaplotypeScore=98.1922;InbreedingCoeff=-0.1627;MQ=62.08;MQ0=9;MQRankSum=0.570;QD=7.71;ReadPosRankSum=-0.114;VQSLOD=3.2273;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:27:0.91:0,1,194	0/0:11,0:11:14.82:0,15,133	0/0:34,0:18:6.02:0,6,68	0/1:26,0:14:3.97:4,0,28	0/0:30,0:31:32.91:0,33,342	0/1:11,15:25:63.20:376,0,63	0/1:5,6:11:12.58:125,0,13	0/0:19,0:28:11.78:0,12,61	0/0:17,0:17:30.07:0,30,327	0/0:30,0:33:58.98:0,59,571	0/0:27,0:30:38.60:0,39,380	0/0:16,0:17:23.90:0,24,250	0/0:16,0:17:29.88:0,30,305	0/0:10,0:11:20.68:0,21,196	0/0:16,0:17:20.78:0,21,205	0/0:14,0:14:29.82:0,30,294	0/0:22,0:22:0.05:0,0,399	0/1:22,1:22:54.06:54,0,297	0/1:18,0:17:6.02:6,0,99	0/0:33,0:34:38.92:0,39,410	0/0:22,0:25:26.21:0,26,212	0/1:11,13:24:15.60:211,0,16	0/1:14,16:32:62.31:391,0,62	0/1:11,11:22:17.80:379,0,18	0/0:22,0:23:35.85:0,36,354	0/0:22,0:24:26.74:0,27,264	0/0:23,0:26:47.46:0,47,461	0/0:11,0:11:27.04:0,27,291
chr10	60438350	.	ATGG	A	2678.90	PASS	AB=1.000;AC=47;AF=0.839;AN=56;BaseQRankSum=-3.261;DP=490;FS=3.790;HRun=0;HaplotypeScore=161.5676;InbreedingCoeff=0.4462;MQ=45.42;MQ0=24;MQRankSum=2.004;QD=6.07;ReadPosRankSum=-3.915;VQSLOD=1.8760;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:25:18.16:155,18,0	1/1:7,0:7:3.85:42,4,0	0/0:13,0:11:32.29:0,32,338	0/0:13,0:10:6.51:0,7,177	1/1:18,0:18:10.95:95,11,0	0/1:20,0:20:11.92:29,0,12	1/1:22,0:16:8.87:66,9,0	1/1:3,22:22:61.21:573,61,0	1/1:17,0:17:10.69:90,11,0	1/1:20,0:18:30.79:250,31,0	1/1:14,0:11:14.98:125,15,0	1/1:16,0:14:0.87:57,1,0	1/1:18,0:17:16.26:117,16,0	1/1:23,0:23:9.55:90,10,0	1/1:29,0:29:22.16:255,22,0	1/1:14,0:14:4.66:28,5,0	1/1:19,0:19:9.76:68,10,0	1/1:5,0:4:1.77:4,2,0	1/1:25,0:20:35.14:251,35,0	1/1:19,0:17:10.46:79,10,0	1/1:37,0:34:5.70:42,6,0	0/1:11,0:11:12.47:20,0,12	0/1:12,0:10:0:0,0,0	0/0:23,0:22:8.26:0,8,73	1/1:12,0:12:11.97:96,12,0	1/1:13,0:13:20.72:169,21,0	1/1:15,0:15:8.63:75,9,0	1/1:3,0:2:5.98:46,6,0
chr10	60438399	.	TGGTGGTGGTG	T	1428.38	PASS	AB=0.950;AC=31;AF=0.574;AN=54;BaseQRankSum=-2.632;DP=334;FS=13.788;HRun=0;HaplotypeScore=133.4525;InbreedingCoeff=-0.4131;MQ=34.40;MQ0=18;MQRankSum=1.905;QD=4.59;ReadPosRankSum=2.811;VQSLOD=1.4881;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:0.63:0,1,39	1/1:3,0:4:5.37:34,5,0	./.	0/1:5,0:1:0:0,0,0	0/1:6,0:6:29.94:44,0,30	0/1:19,0:18:25.55:26,0,159	1/1:17,0:9:6.03:37,6,0	1/1:7,0:6:2.80:13,3,0	0/1:14,2:16:55.49:163,0,55	0/1:13,0:11:41.75:182,0,42	1/1:5,0:5:3.01:67,3,0	0/1:19,1:21:74.44:82,0,74	0/1:10,2:10:31.94:95,0,32	0/1:21,1:21:75.11:86,0,75	0/1:17,0:18:17.30:17,0,263	0/1:8,2:11:87.18:87,0,88	0/1:12,0:13:99:113,0,231	1/1:4,0:4:0.25:58,0,0	0/1:15,0:14:79.04:186,0,79	0/1:12,1:11:4.19:9,0,4	1/1:22,1:23:2.35:30,2,0	0/1:11,0:11:66.09:66,0,73	1/1:9,0:8:1.32:16,1,0	0/1:26,0:24:12.48:12,0,363	0/0:3,0:2:0:0,0,0	0/1:9,0:9:99:134,0,121	0/1:8,0:7:0.01:0,0,0	0/0:2,0:1:3.01:0,3,95
chr10	60438402	.	TGGTGGTG	T	1467.66	PASS	AB=0.928;AC=34;AF=0.630;AN=54;BaseQRankSum=-2.951;DP=349;FS=19.635;HRun=0;HaplotypeScore=124.8598;InbreedingCoeff=-0.3500;MQ=35.14;MQ0=16;MQRankSum=2.461;QD=4.29;ReadPosRankSum=3.295;VQSLOD=1.1248;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:12,1:13:0.68:5,0,1	1/1:3,1:4:4.41:14,4,0	./.	0/1:10,0:2:0:0,0,0	0/1:5,0:5:4.12:27,0,4	0/1:13,5:18:49.35:49,0,75	1/1:16,1:8:6.36:37,6,0	1/1:9,0:8:5.80:42,6,0	0/1:15,1:16:2.10:149,0,2	0/1:11,1:11:18.04:174,0,18	1/1:6,0:6:5.61:56,6,0	0/1:18,1:19:7.38:69,0,7	0/1:14,0:12:12.74:79,0,13	0/1:20,1:20:5.98:66,0,6	0/1:17,1:19:32.34:32,0,76	0/1:10,1:11:30.79:75,0,31	0/1:11,0:12:99:106,0,139	1/1:4,1:4:1.06:59,1,0	0/1:9,6:14:36.48:225,0,36	0/1:14,0:12:0.03:17,0,0	1/1:26,1:26:2.45:15,2,0	0/1:13,0:12:32.96:102,0,33	1/1:10,0:9:5.35:40,5,0	0/1:28,0:25:26.46:26,0,228	1/1:3,0:3:2.51:10,3,0	0/1:9,1:10:79.88:123,0,80	0/1:8,0:7:0.01:0,0,0	0/0:2,0:1:3.01:0,3,59
chr10	60438405	.	TGGTG	T	1710.19	PASS	AB=0.822;AC=43;AF=0.796;AN=54;BaseQRankSum=-2.571;DP=374;FS=7.036;HRun=0;HaplotypeScore=119.6151;InbreedingCoeff=0.0018;MQ=38.01;MQ0=16;MQRankSum=2.797;QD=4.67;ReadPosRankSum=1.562;VQSLOD=1.8496;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:12,2:14:2.97:18,3,0	1/1:3,0:3:5.38:46,5,0	./.	0/1:8,0:2:0:0,0,0	0/1:4,1:5:4.10:5,0,4	0/1:15,0:16:39.63:52,0,40	1/1:16,0:7:10.38:51,10,0	1/1:14,0:13:9.12:70,9,0	1/1:14,1:15:19.77:144,20,0	1/1:11,0:11:16.41:149,16,0	1/1:5,0:5:5.59:35,6,0	1/1:18,1:19:10.88:65,11,0	1/1:15,0:13:18.44:79,18,0	1/1:17,4:21:15.34:94,15,0	0/1:14,4:21:4.71:42,0,5	1/1:12,0:12:4.46:73,4,0	0/1:11,1:12:80.80:96,0,81	1/1:6,0:5:2.78:47,3,0	1/1:13,2:14:23.58:285,24,0	1/1:14,1:13:2.01:20,2,0	1/1:29,1:30:7.44:47,7,0	0/1:13,0:15:2.90:102,0,3	1/1:11,0:10:5.54:40,6,0	0/1:27,0:26:42.78:43,0,123	1/1:3,1:4:5.35:24,5,0	0/1:14,1:15:22.45:209,0,22	0/1:3,7:9:0:0,0,0	0/0:3,0:2:3:0,3,27
chr10	60438408	.	TG	T	1590.15	PASS	AB=0.869;AC=47;AF=0.870;AN=54;BaseQRankSum=-1.800;DP=401;FS=5.958;HRun=2;HaplotypeScore=111.9707;InbreedingCoeff=-0.0290;MQ=41.51;MQ0=17;MQRankSum=1.901;QD=4.03;ReadPosRankSum=2.300;VQSLOD=0.7108;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:14:4.29:20,4,0	1/1:1,2:3:5.38:39,5,0	./.	0/1:15,0:2:0:0,0,0	1/1:7,0:7:1.72:8,2,0	0/1:13,4:17:10.26:55,0,10	1/1:13,2:7:10.54:51,11,0	1/1:14,1:14:8.72:70,9,0	1/1:18,0:18:20.80:115,21,0	1/1:14,0:14:25.62:200,26,0	1/1:10,0:10:5.60:37,6,0	1/1:16,0:17:11.56:48,12,0	1/1:16,0:14:21.45:116,21,0	1/1:21,2:22:17.15:96,17,0	1/1:17,3:20:13.45:57,13,0	1/1:10,1:11:7.55:63,8,0	0/1:12,3:13:23.29:80,0,23	1/1:8,0:7:5.86:44,6,0	0/1:15,0:14:5.98:165,0,6	1/1:20,0:18:4.48:24,4,0	1/1:30,2:31:7.79:47,8,0	0/1:9,8:16:3.05:102,0,3	1/1:7,5:11:5.54:40,6,0	0/1:18,9:25:46.06:46,0,89	1/1:4,1:5:5.44:24,5,0	1/1:15,1:16:4.36:137,4,0	0/1:10,0:9:0:0,0,0	1/1:2,0:2:2.74:12,3,0
chr10	60438409	.	G	GT	4141.48	PASS	AB=0.931;AC=48;AF=0.889;AN=54;BaseQRankSum=-3.460;DP=444;FS=1.294;HRun=1;HaplotypeScore=118.6647;InbreedingCoeff=-0.0336;MQ=41.40;MQ0=17;MQRankSum=1.213;QD=9.48;ReadPosRankSum=3.044;VQSLOD=1.5669;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,7:13:5.38:94,5,0	1/1:4,0:4:5.95:49,6,0	./.	0/1:15,0:2:0:0,0,0	1/1:4,7:11:2.13:46,2,0	0/1:19,0:19:7.06:165,0,7	1/1:12,3:7:11.99:155,12,0	1/1:19,1:19:24.36:351,24,0	1/1:7,12:19:23.20:342,23,0	1/1:7,10:17:26.42:345,26,0	1/1:7,8:15:5.95:93,6,0	1/1:16,3:19:14.60:213,15,0	1/1:9,9:16:13.84:327,14,0	1/1:11,12:22:18.31:289,18,0	1/1:10,10:20:15.78:282,16,0	1/1:6,5:11:7.51:143,8,0	0/1:9,6:13:24.04:118,0,24	1/1:10,0:9:4.25:67,4,0	0/1:16,0:15:19:146,0,19	1/1:9,12:19:5.88:138,6,0	1/1:23,9:31:9.09:107,9,0	0/1:17,2:18:1.35:150,0,1	1/1:21,0:17:5.72:78,6,0	0/1:28,1:26:89.12:100,0,89	1/1:4,3:7:6.02:96,6,0	1/1:16,0:16:4.68:235,5,0	1/1:10,0:9:0.47:1,0,0	1/1:2,0:2:2.74:12,3,0
chr10	60438778	.	AG	A	18128.24	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-2.960;DP=522;FS=6.941;HRun=2;HaplotypeScore=53.8536;InbreedingCoeff=0.9946;MQ=77.45;MQ0=0;MQRankSum=-8.102;QD=36.33;ReadPosRankSum=4.657;VQSLOD=5.1469;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,16:16:48.16:623,48,0	1/1:0,8:8:21.07:273,21,0	0/0:14,0:14:42.14:0,42,616	0/0:9,0:9:27.09:0,27,391	1/1:0,14:14:36.12:467,36,0	1/1:0,28:28:75.24:974,75,0	1/1:0,15:15:39.13:506,39,0	1/1:1,33:34:99:1273,99,0	1/1:0,20:20:51.17:662,51,0	1/1:0,30:30:90.27:1153,90,0	1/1:0,21:21:63.20:818,63,0	1/1:0,25:25:69.22:896,69,0	1/1:1,14:15:42.14:545,42,0	1/1:0,21:21:63.10:779,63,0	1/1:0,19:19:57.19:740,57,0	1/1:0,23:23:66.21:857,66,0	1/1:1,16:17:48.16:623,48,0	1/1:1,12:13:33.11:428,33,0	1/1:1,16:17:48.15:610,48,0	1/1:0,30:30:84.23:1071,84,0	1/1:0,14:14:33.11:429,33,0	1/1:0,15:15:42.14:545,42,0	1/1:0,17:17:39.13:506,39,0	1/1:0,10:10:30.10:389,30,0	1/1:0,21:21:63.20:818,63,0	1/1:0,26:26:78.25:1013,78,0	1/1:0,22:22:66.21:857,66,0	1/1:0,8:8:21.07:273,21,0
chr10	60439026	.	G	GT	11076.30	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-2.542;DP=473;FS=4.354;HRun=9;HaplotypeScore=81.8184;InbreedingCoeff=0.8599;MQ=76.39;MQ0=2;MQRankSum=-5.269;QD=24.95;ReadPosRankSum=2.942;VQSLOD=5.6106;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,8:9:18.05:199,18,0	1/1:1,5:6:12.50:134,13,0	0/0:13,0:12:4.38:0,4,172	0/0:14,0:13:26.92:0,27,216	1/1:6,18:24:42.11:465,42,0	1/1:1,17:18:42.11:464,42,0	1/1:1,3:5:11.87:113,12,0	1/1:7,25:32:75.17:810,75,0	1/1:3,9:12:21.06:232,21,0	1/1:3,17:20:25.05:487,25,0	1/1:4,20:24:60.08:637,60,0	1/1:1,15:16:45.06:482,45,0	1/1:1,15:16:36.10:398,36,0	1/1:4,11:15:27.07:299,27,0	1/1:1,14:15:36.10:398,36,0	1/1:1,5:9:10.93:141,11,0	1/1:0,14:14:33.09:365,33,0	1/1:0,11:11:30.08:332,30,0	1/1:5,15:20:42.11:457,42,0	1/1:3,36:39:99:1140,108,0	1/1:1,6:7:18.05:199,18,0	1/1:0,8:9:23.86:233,24,0	1/1:2,20:22:51.10:551,51,0	1/1:2,8:11:23.90:246,24,0	1/1:2,16:18:48.13:531,48,0	1/1:7,25:32:23.11:700,23,0	1/1:2,26:28:66.18:730,66,0	1/1:0,12:12:30.08:332,30,0
chr10	60439208	.	TAC	T	4227.68	PASS	AC=50;AF=1.000;AN=50;BaseQRankSum=-0.761;DP=509;FS=3.897;HRun=0;HaplotypeScore=123.3622;InbreedingCoeff=-0.0012;MQ=67.03;MQ0=5;MQRankSum=0.695;QD=9.63;ReadPosRankSum=-0.232;VQSLOD=4.6412;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:20,7:27:25.87:258,26,0	1/1:6,3:9:14.87:144,15,0	./.	./.	1/1:14,9:24:29.91:305,30,0	1/1:11,0:23:31.25:153,31,0	1/1:10,0:12:5.68:28,6,0	./.	1/1:9,5:14:15.04:163,15,0	1/1:8,4:13:14.87:144,15,0	1/1:14,13:30:38.77:383,39,0	1/1:12,7:20:20.89:209,21,0	1/1:10,9:20:23.90:242,24,0	1/1:11,8:20:11.97:256,12,0	1/1:14,3:18:11.86:111,12,0	1/1:5,3:9:11.86:111,12,0	1/1:8,3:11:9.02:98,9,0	1/1:10,5:15:15.04:163,15,0	1/1:11,1:11:3.01:33,3,0	1/1:18,8:28:29.74:287,30,0	1/1:9,6:15:12.03:130,12,0	1/1:10,0:17:17.08:84,17,0	1/1:11,0:18:22.73:111,23,0	1/1:11,0:15:2.84:14,3,0	1/1:8,8:17:23.90:242,24,0	1/1:13,5:18:15.04:163,15,0	1/1:15,11:27:32.90:331,33,0	1/1:3,3:6:6.02:65,6,0
chr10	60439222	.	C	CGT	9365.66	PASS	AB=0.969;AC=36;AF=0.643;AN=56;BaseQRankSum=0.254;DP=541;FS=33.555;HRun=0;HaplotypeScore=121.0406;InbreedingCoeff=-0.3048;MQ=52.69;MQ0=11;MQRankSum=1.126;QD=18.84;ReadPosRankSum=10.432;VQSLOD=2.8194;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:25:17.41:320,0,17	1/1:7,0:7:21.01:226,21,0	0/0:18,0:10:25.40:0,25,356	0/0:26,0:13:23.84:0,24,449	0/1:26,0:26:55.58:498,0,56	0/1:26,1:26:40.83:358,0,41	0/1:15,0:15:25.62:319,0,26	0/1:11,19:30:99:736,0,122	1/1:16,0:16:20.30:384,20,0	1/1:12,0:12:33.95:469,34,0	1/1:29,0:29:1.91:546,2,0	0/1:22,0:22:37.54:317,0,38	0/1:22,0:21:20.35:296,0,20	0/1:23,0:23:42.34:461,0,42	0/1:14,0:14:10:278,0,10	1/1:11,0:10:4.90:201,5,0	0/1:12,0:12:9.80:97,0,10	0/1:18,0:17:96.63:169,0,97	0/1:10,0:9:24.72:145,0,25	0/1:31,0:31:22.80:773,0,23	1/1:19,1:18:3.86:351,4,0	0/1:18,0:18:60.21:376,0,60	0/1:20,0:20:76.25:332,0,76	0/1:15,1:16:22.72:116,0,23	1/1:19,0:19:29.63:367,30,0	1/1:20,0:20:1.85:515,2,0	1/1:25,0:25:51.73:589,52,0	1/1:6,0:6:12:126,12,0
chr10	60440948	.	GTGGGC	G	21772.34	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=1.712;DP=446;FS=4.764;HRun=0;HaplotypeScore=167.8840;InbreedingCoeff=0.8860;MQ=58.97;MQ0=0;MQRankSum=-8.966;QD=52.85;ReadPosRankSum=2.758;VQSLOD=5.3669;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,30:33:87.30:1721,87,0	1/1:0,11:11:33.11:704,33,0	0/0:20,0:18:52.04:0,52,1321	0/0:14,0:13:34:0,34,955	1/1:0,11:11:33.11:668,33,0	1/1:3,20:23:63.22:1315,63,0	1/1:5,9:14:30.10:589,30,0	1/1:2,17:19:51.18:1112,51,0	1/1:2,20:22:60.21:1260,60,0	1/1:3,13:16:42.14:878,42,0	1/1:5,13:18:42.14:820,42,0	1/1:1,9:10:27.09:578,27,0	1/1:1,17:19:54.19:1137,54,0	1/1:1,14:15:39.13:822,39,0	1/1:3,13:16:39.13:828,39,0	1/1:1,19:20:54.19:1158,54,0	1/1:3,6:9:12.04:255,12,0	1/1:1,3:4:12.04:213,12,0	1/1:5,13:18:39.13:849,39,0	1/1:4,13:17:42.14:842,42,0	1/1:5,8:13:24.55:422,25,0	1/1:4,13:17:45.15:882,45,0	1/1:1,14:15:45.15:915,45,0	1/1:2,13:15:20.84:409,21,0	1/1:0,10:10:30.10:638,30,0	1/1:3,21:24:69.24:1466,69,0	1/1:4,18:22:57.20:1226,57,0	1/1:0,1:1:3.01:65,3,0
chr10	60440949	.	T	TCAA	6092.14	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=5.852;DP=405;FS=4.761;HRun=0;HaplotypeScore=201.4391;InbreedingCoeff=0.8673;MQ=61.09;MQ0=0;MQRankSum=-8.254;QD=16.42;ReadPosRankSum=2.241;VQSLOD=4.3416;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:32,0:31:81.51:656,82,0	1/1:11,0:11:30.55:144,31,0	0/0:19,0:18:22.65:0,23,806	0/0:14,0:13:31.28:0,31,594	1/1:11,0:11:28.17:182,28,0	1/1:20,2:22:58.27:350,58,0	1/1:10,0:10:27.69:183,28,0	1/1:17,0:17:48.76:303,49,0	1/1:20,0:20:48.19:326,48,0	1/1:14,0:14:40.20:230,40,0	1/1:14,1:18:39.37:370,39,0	1/1:9,0:9:25.16:118,25,0	1/1:18,0:18:48.20:221,48,0	1/1:14,0:14:35.47:157,35,0	1/1:13,0:13:36.14:169,36,0	1/1:19,0:19:50.63:255,51,0	1/1:6,0:6:11.35:68,11,0	1/1:4,0:4:8.69:74,9,0	1/1:13,0:13:37.01:184,37,0	1/1:14,0:14:37.67:254,38,0	1/1:9,0:9:19.24:143,19,0	1/1:13,2:15:39.33:300,39,0	1/1:14,0:15:38.09:304,38,0	1/1:14,0:14:19.70:180,20,0	1/1:10,0:10:28.03:160,28,0	1/1:23,0:23:65.34:474,65,0	1/1:19,0:19:53.55:272,54,0	1/1:1,0:1:2.84:14,3,0
chr10	60440956	.	AT	A	13938.34	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=4.106;DP=429;FS=0.714;HRun=1;HaplotypeScore=164.4995;InbreedingCoeff=0.8748;MQ=65.42;MQ0=0;MQRankSum=-8.778;QD=35.56;ReadPosRankSum=2.711;VQSLOD=4.5000;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,30:30:75.24:944,75,0	1/1:0,11:11:33.11:431,33,0	0/0:19,0:17:46.49:0,46,701	0/0:18,0:17:39.25:0,39,550	1/1:0,15:15:45.15:589,45,0	1/1:1,20:21:60.18:755,60,0	1/1:0,10:10:27.09:345,27,0	1/1:0,18:18:51.17:688,51,0	1/1:0,20:20:60.14:760,60,0	1/1:1,13:14:39.13:525,39,0	1/1:4,13:17:41.81:467,42,0	1/1:0,9:9:27.09:353,27,0	1/1:0,18:18:54.17:689,54,0	1/1:2,14:16:45.14:567,45,0	1/1:3,13:16:48.15:611,48,0	1/1:1,19:20:57.19:751,57,0	1/1:0,6:6:12.04:155,12,0	1/1:0,3:3:9.03:121,9,0	1/1:0,14:14:42.14:564,42,0	1/1:0,17:17:51.04:597,51,0	1/1:0,10:10:21.06:259,21,0	1/1:2,13:15:45.13:558,45,0	1/1:2,14:16:48.13:580,48,0	1/1:0,15:15:23.96:302,24,0	1/1:2,10:12:36.11:458,36,0	1/1:0,26:26:75.20:980,75,0	1/1:3,19:22:66.20:849,66,0	1/1:0,1:1:3.01:40,3,0
chr10	60441346	.	C	CA	11487.45	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-11.393;DP=449;FS=5.507;HRun=4;HaplotypeScore=38.5316;InbreedingCoeff=0.9946;MQ=70.30;MQ0=1;MQRankSum=-2.087;QD=34.81;ReadPosRankSum=2.803;VQSLOD=5.0455;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,12:14:33.11:445,33,0	1/1:0,6:6:15.05:205,15,0	0/0:14,0:13:21.10:0,21,326	0/0:14,0:11:25.53:0,26,255	1/1:1,15:16:42.01:511,42,0	0/0:17,0:17:45.13:0,45,510	0/0:10,0:10:30.07:0,30,331	0/0:19,0:19:45.12:0,45,502	1/1:1,16:17:45.15:615,45,0	1/1:3,26:29:78.26:1067,78,0	1/1:2,11:13:33.11:442,33,0	1/1:2,22:24:54.18:739,54,0	1/1:1,13:14:29.79:410,30,0	1/1:0,9:9:21.07:287,21,0	1/1:1,19:20:51.17:691,51,0	1/1:4,15:19:39.13:533,39,0	1/1:1,14:15:42.14:574,42,0	1/1:0,9:10:27.98:368,28,0	1/1:0,15:15:45.14:597,45,0	1/1:0,27:27:72.24:983,72,0	1/1:0,9:9:24.08:328,24,0	0/0:10,0:10:30.09:0,30,340	0/0:21,0:21:63.17:0,63,707	0/0:14,0:14:30.08:0,30,340	1/1:0,26:26:72.24:985,72,0	1/1:0,19:19:57.18:764,57,0	1/1:1,16:17:42.14:574,42,0	1/1:1,10:11:27.09:369,27,0
chr10	60441564	.	CAA	C	1106.88	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-3.638;DP=658;FS=2.621;HRun=2;HaplotypeScore=113.7943;InbreedingCoeff=0.9876;MQ=68.42;MQ0=0;MQRankSum=-0.325;QD=42.57;ReadPosRankSum=-2.581;VQSLOD=2.8868;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,147,2925	0/0:6,0:6:18.06:0,18,366	0/0:38,0:37:99:0,111,2181	0/0:18,0:18:51.17:0,51,990	0/0:25,0:25:75.26:0,75,1524	0/0:23,0:23:69.24:0,69,1392	0/0:19,0:19:57.20:0,57,1149	1/1:0,26:26:75.25:1202,75,0	0/0:29,0:29:87.27:0,87,1678	0/0:34,0:34:99:0,102,1996	0/0:17,0:17:51.18:0,51,1037	0/0:17,0:17:51.18:0,51,1037	0/0:26,0:26:78.27:0,78,1575	0/0:16,0:16:48.16:0,48,966	0/0:29,0:29:87.28:0,87,1685	0/0:18,0:18:54.19:0,54,1090	0/0:32,0:32:96.33:0,96,1940	0/0:21,0:21:63.15:0,63,1186	0/0:30,0:29:87.29:0,87,1717	0/0:23,0:23:69.24:0,69,1402	0/0:26,0:26:75.24:0,75,1476	0/0:10,0:10:30.09:0,30,573	0/0:13,0:13:39.13:0,39,772	0/0:20,0:20:60.21:0,60,1203	0/0:20,0:20:60.21:0,60,1220	0/0:25,0:25:75.26:0,75,1509	0/0:41,0:41:99:0,123,2490	0/0:7,0:7:21.07:0,21,416
chr10	60442174	.	TATTATTATTATTATG	T	7656.60	PASS	AB=0.920;AC=36;AF=0.750;AN=48;BaseQRankSum=4.555;DP=239;FS=6.603;HRun=0;HaplotypeScore=90.9577;InbreedingCoeff=0.1509;MQ=60.00;MQ0=2;MQRankSum=-0.593;QD=34.03;ReadPosRankSum=3.148;VQSLOD=2.9157;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:20,0:19:1.02:234,0,1	./.	0/0:5,0:5:8.19:0,8,147	./.	0/1:6,0:6:2.22:113,0,2	1/1:16,0:16:10.94:193,11,0	0/0:1,0:1:1.82:0,2,5	0/1:26,0:26:99:156,0,362	1/1:3,0:3:3.01:51,3,0	1/1:0,12:12:23.90:409,24,0	1/1:1,13:14:26.88:613,27,0	1/1:2,0:2:2.97:20,3,0	0/1:3,0:3:13.02:36,0,13	1/1:0,8:8:18.06:801,18,0	./.	1/1:0,10:10:6.49:273,6,0	0/1:1,13:14:99:130,0,159	0/1:6,0:6:28.06:28,0,81	1/1:1,17:17:50.91:1148,51,0	1/1:0,13:13:23.81:280,24,0	1/1:0,5:5:6.02:249,6,0	0/0:1,0:1:3:0,3,28	1/1:4,0:4:6.02:93,6,0	./.	1/1:1,9:10:9.03:386,9,0	1/1:0,12:12:33.01:949,33,0	1/1:0,16:16:18.06:817,18,0	1/1:1,6:6:15.05:679,15,0
chr10	60442177	.	TATTATTATTATG	T	7243.13	PASS	AB=1.000;AC=43;AF=0.935;AN=46;BaseQRankSum=0.648;DP=243;FS=0.000;HRun=0;HaplotypeScore=80.6413;InbreedingCoeff=0.2799;MQ=68.46;MQ0=2;MQRankSum=-3.744;QD=31.77;ReadPosRankSum=2.942;VQSLOD=3.2578;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,17:18:18.06:605,18,0	./.	0/0:8,0:8:7.36:0,7,138	./.	1/1:0,6:6:14.94:249,15,0	1/1:0,19:19:11.17:430,11,0	1/1:1,0:1:3.01:35,3,0	1/1:23,0:23:64.22:619,64,0	1/1:0,5:5:3.01:111,3,0	1/1:12,0:12:20.96:309,21,0	1/1:13,0:13:23.91:427,24,0	1/1:2,0:2:5.96:45,6,0	1/1:4,0:4:8.97:73,9,0	1/1:8,0:8:18.06:553,18,0	./.	1/1:10,0:10:6.02:190,6,0	0/1:14,0:14:88.81:89,0,113	1/1:6,0:6:14.88:107,15,0	1/1:18,0:17:44.95:815,45,0	1/1:13,0:13:23.81:238,24,0	1/1:5,0:5:6.02:167,6,0	./.	1/1:0,6:6:5.94:211,6,0	./.	1/1:10,0:10:9.03:282,9,0	1/1:12,0:12:30:647,30,0	1/1:16,0:16:18.06:569,18,0	1/1:6,0:6:15.05:472,15,0
chr10	60443631	.	TC	T	19783.98	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=9.379;DP=683;FS=16.968;HRun=1;HaplotypeScore=68.9725;InbreedingCoeff=0.9997;MQ=82.43;MQ0=0;MQRankSum=-6.600;QD=39.57;ReadPosRankSum=4.518;VQSLOD=3.3602;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,35:35:90.30:1258,90,0	1/1:0,10:10:30.10:418,30,0	0/0:18,0:19:49.57:0,50,810	0/0:28,0:28:80.76:0,81,1118	1/1:0,40:40:99:1656,120,0	0/0:22,0:22:66.18:0,66,984	0/0:13,0:13:39.13:0,39,620	0/0:28,0:28:81.27:0,81,1271	1/1:0,28:28:81.27:1132,81,0	1/1:0,40:40:99:1677,120,0	1/1:0,29:29:84.19:1131,84,0	1/1:0,19:19:57.19:797,57,0	1/1:0,23:23:63.21:881,63,0	1/1:0,24:24:66.22:923,66,0	1/1:0,38:38:99:1468,105,0	1/1:0,15:15:36.12:503,36,0	1/1:0,24:24:72.24:1006,72,0	1/1:0,15:15:42.14:586,42,0	1/1:0,24:24:72.20:955,72,0	1/1:0,24:24:72.24:1007,72,0	1/1:1,24:25:66.22:923,66,0	0/0:23,0:23:69.24:0,69,1102	0/0:25,0:25:75.26:0,75,1196	0/0:25,0:25:75.18:0,75,1124	1/1:0,22:22:57.19:797,57,0	1/1:0,26:26:78.24:1072,78,0	1/1:0,30:30:87.29:1216,87,0	1/1:0,9:9:27.09:377,27,0
chr10	60443894	.	ACATC	A	6670.46	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=14.400;DP=746;FS=0.000;HRun=0;HaplotypeScore=120.5743;InbreedingCoeff=0.9918;MQ=78.40;MQ0=1;MQRankSum=-4.006;QD=47.99;ReadPosRankSum=4.554;VQSLOD=5.6619;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:72.22:0,72,1981	0/0:7,0:7:21.07:0,21,609	0/0:20,0:20:57.17:0,57,1344	0/0:18,0:18:48.13:0,48,1230	0/0:36,0:36:99:0,108,3048	1/1:0,30:30:66.23:1383,66,0	1/1:0,15:15:30.03:584,30,0	0/0:31,0:31:90.31:0,90,2573	0/0:32,0:32:96.33:0,96,2695	0/0:43,0:43:99:0,129,3541	0/0:21,0:21:63.20:0,63,1724	0/0:39,0:39:99:0,117,3287	0/0:36,0:36:99:0,108,2874	0/0:24,0:24:72.25:0,72,1997	0/0:33,0:33:99:0,99,2635	0/0:27,0:27:81.28:0,81,2262	0/0:30,0:30:90.31:0,90,2544	0/0:14,0:14:36.12:0,36,1018	0/0:16,0:16:48.16:0,48,1255	0/0:24,1:25:12.35:0,12,1931	0/0:26,0:25:75.24:0,75,2102	1/1:0,35:35:84.22:1715,84,0	1/1:0,32:32:78.18:1589,78,0	1/1:0,27:27:69.13:1399,69,0	0/0:24,0:24:72.25:0,72,1982	0/0:35,0:35:99:0,105,2872	0/0:37,0:37:99:0,111,3055	0/0:8,0:8:24.08:0,24,695
chr10	60445147	.	GA	G	2490.75	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=10.575;DP=583;FS=4.432;HRun=8;HaplotypeScore=55.0605;InbreedingCoeff=0.9967;MQ=81.62;MQ0=0;MQRankSum=-0.444;QD=23.72;ReadPosRankSum=3.334;VQSLOD=4.5042;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:42.12:0,42,495	0/0:17,0:17:51.16:0,51,616	0/0:17,0:17:24.95:0,25,387	0/0:14,0:14:21.29:0,21,411	0/0:23,0:23:66.19:0,66,784	1/1:3,26:29:75.12:724,75,0	1/1:1,18:19:51.08:493,51,0	0/0:31,0:31:84.26:0,84,1010	0/0:21,0:21:54.17:0,54,652	0/0:23,0:23:66.20:0,66,796	0/0:25,0:25:63.19:0,63,761	0/0:18,0:18:51.12:0,51,583	0/0:19,0:19:54.12:0,54,626	0/0:21,0:21:57.17:0,57,687	0/0:19,0:19:57.17:0,57,689	0/0:11,0:11:33.09:0,33,388	0/0:16,0:16:33.07:0,33,383	0/0:25,0:25:60.16:0,60,711	0/0:22,0:22:63.19:0,63,760	0/0:32,0:32:96.29:0,96,1160	0/0:19,0:19:45.14:0,45,544	1/1:2,19:21:57.09:551,57,0	1/1:1,26:27:75.12:724,75,0	1/1:0,9:9:18.03:174,18,0	0/0:24,0:24:72.21:0,72,859	0/0:17,0:17:51.15:0,51,610	0/0:32,0:32:93.29:0,93,1122	0/0:16,0:16:42.03:0,42,459
chr10	60448178	.	G	GTT	17562.45	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=0.814;DP=594;FS=2.321;HRun=8;HaplotypeScore=129.9187;InbreedingCoeff=0.9498;MQ=72.14;MQ0=0;MQRankSum=-5.352;QD=30.70;ReadPosRankSum=2.471;VQSLOD=4.0606;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,13:16:27.05:401,27,0	1/1:0,8:8:18.06:286,18,0	0/0:14,0:14:24.03:0,24,262	0/0:8,0:8:15.03:0,15,166	1/1:5,31:37:99:1458,99,0	1/1:1,0:25:54.90:189,55,0	1/1:0,0:9:17.47:60,17,0	1/1:5,0:45:99:340,99,0	1/1:0,9:9:27.09:427,27,0	1/1:5,29:36:98.80:1489,99,0	1/1:2,24:27:77.66:1143,78,0	1/1:4,19:24:51.17:809,51,0	1/1:4,18:22:57.19:884,57,0	1/1:3,18:22:39.13:619,39,0	1/1:6,21:28:71.69:1076,72,0	1/1:3,27:30:78.27:1230,78,0	1/1:1,17:18:42.14:666,42,0	1/1:1,6:7:15.05:238,15,0	1/1:6,15:22:51.13:762,51,0	1/1:2,23:26:69.15:1032,69,0	1/1:3,11:16:26.58:390,27,0	1/1:5,0:32:66.43:227,66,0	1/1:0,0:17:42.42:146,42,0	1/1:1,0:6:12.48:43,12,0	1/1:1,19:21:53.67:817,54,0	1/1:3,19:22:63.21:991,63,0	1/1:6,33:41:99:1642,105,0	1/1:1,4:6:14.54:199,15,0
chr10	60449349	.	C	CAAT	33054.48	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-5.581;DP=566;FS=1.677;HRun=0;HaplotypeScore=83.4863;InbreedingCoeff=0.9613;MQ=66.90;MQ0=0;MQRankSum=-7.363;QD=61.44;ReadPosRankSum=4.324;VQSLOD=6.5374;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,14:17:33.11:779,33,0	1/1:1,10:11:33.11:780,33,0	0/0:18,0:18:54.17:0,54,852	0/0:10,0:10:18.06:0,18,282	1/1:4,27:33:90.26:2041,90,0	1/1:5,24:29:75.26:1704,75,0	1/1:2,8:10:27.09:620,27,0	1/1:6,41:50:99:3333,147,0	1/1:1,18:21:51.18:1205,51,0	1/1:3,24:27:81.28:1859,81,0	1/1:2,27:30:81.15:1725,81,0	1/1:2,17:20:57.20:1317,57,0	1/1:1,10:11:33.11:778,33,0	1/1:4,16:21:48.16:1117,48,0	1/1:1,14:15:42.14:990,42,0	1/1:0,13:15:36.12:851,36,0	1/1:1,11:12:30.53:658,31,0	1/1:1,6:7:18.06:425,18,0	1/1:3,14:17:51.18:1158,51,0	1/1:3,29:33:99:2188,99,0	1/1:2,14:16:45.15:1030,45,0	1/1:1,22:25:63.22:1472,63,0	1/1:2,15:17:51.17:1155,51,0	1/1:1,9:11:30.10:675,30,0	1/1:3,15:20:45.15:996,45,0	1/1:2,27:31:93.29:2001,93,0	1/1:4,26:31:87.30:1985,87,0	1/1:2,4:8:9.03:213,9,0
chr10	60449632	.	AAC	A	90.55	PASS	AB=0.966;AC=10;AF=0.192;AN=52;BaseQRankSum=0.582;DP=461;FS=12.635;HRun=0;HaplotypeScore=67.1215;InbreedingCoeff=-0.0728;MQ=63.96;MQ0=6;MQRankSum=2.033;QD=0.73;ReadPosRankSum=3.141;VQSLOD=0.3121;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:2.41:0,2,156	0/0:7,0:7:0:0,0,0	./.	./.	0/1:18,0:17:49.03:49,0,107	0/0:17,0:16:8.86:0,9,76	0/0:24,0:22:12.02:0,12,134	0/0:20,0:20:11.96:0,12,106	0/1:12,3:15:26.54:27,0,32	0/1:15,0:15:23.51:26,0,24	0/0:17,3:20:15.05:0,15,218	0/0:15,0:15:21.05:0,21,277	0/0:7,0:8:15.03:0,15,179	0/0:6,0:10:6.01:0,6,70	0/1:11,0:11:5.79:26,0,6	0/1:10,0:10:32.49:32,0,40	0/1:15,2:17:14.05:14,0,168	1/1:7,0:7:3:27,3,0	0/0:10,0:10:9.02:0,9,110	0/1:17,0:16:13.75:14,0,131	0/0:23,0:23:5.21:0,5,138	0/0:22,0:21:3:0,3,26	0/0:14,0:14:14.96:0,15,121	0/0:25,0:25:9.46:0,9,78	0/0:14,0:14:9.03:0,9,125	0/1:14,0:14:4.39:4,0,97	0/0:8,0:13:12.48:0,12,136	0/0:8,0:7:2.99:0,3,24
chr10	60450277	.	G	GTTTAT	709.42	PASS	AB=0.698;AC=39;AF=0.750;AN=52;BaseQRankSum=2.187;DP=159;FS=0.000;HRun=0;HaplotypeScore=53.1708;InbreedingCoeff=0.2446;MQ=34.87;MQ0=7;MQRankSum=-3.087;QD=5.03;ReadPosRankSum=-0.893;VQSLOD=1.2907;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:2,0:6:2.92:0,3,17	1/1:0,0:2:2.51:7,3,0	0/0:3,0:1:3.01:0,3,31	0/0:5,0:3:9.03:0,9,198	0/1:0,0:7:2.05:2,0,12	1/1:0,0:5:2.49:6,2,0	1/1:2,0:2:0.41:1,0,0	1/1:12,2:21:38.79:327,39,0	1/1:2,0:5:1.25:3,1,0	1/1:1,0:4:6.28:85,6,0	0/1:2,0:11:1.86:2,0,23	./.	1/1:0,0:6:10.64:81,11,0	1/1:1,0:4:1.82:5,2,0	1/1:2,0:8:3.72:10,4,0	1/1:0,0:2:1.25:3,1,0	0/1:7,0:10:3.11:55,0,3	0/1:3,0:3:29.50:29,0,49	0/1:2,0:5:4.91:87,0,5	1/1:1,0:8:4.98:11,5,0	1/1:3,0:3:1.36:4,1,0	./.	1/1:1,0:7:2.66:7,3,0	0/1:0,0:5:0:0,0,0	1/1:1,0:4:1.02:3,1,0	1/1:5,0:5:2.51:6,3,0	1/1:1,0:4:7.84:97,8,0	0/1:3,0:3:1.71:2,0,4
chr10	60450285	.	GTA	G	2314.22	PASS	AB=1.000;AC=48;AF=0.889;AN=54;BaseQRankSum=-3.012;DP=190;FS=1.822;HRun=0;HaplotypeScore=48.2165;InbreedingCoeff=0.2711;MQ=45.86;MQ0=6;MQRankSum=1.020;QD=13.30;ReadPosRankSum=-0.406;VQSLOD=3.2826;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,0:9:14.80:135,15,0	1/1:2,0:2:2.80:19,3,0	0/0:5,0:3:3:0,3,38	0/0:6,0:4:12.02:0,12,162	1/1:8,0:8:7.72:92,8,0	1/1:6,0:6:9.02:99,9,0	1/1:3,0:3:8.86:60,9,0	1/1:22,0:19:35.94:349,36,0	1/1:7,0:7:9.01:93,9,0	1/1:8,0:7:20.51:168,21,0	1/1:13,0:13:24.04:240,24,0	1/1:1,0:1:3:25,3,0	1/1:9,0:9:15.81:173,16,0	1/1:5,0:5:5.96:45,6,0	1/1:8,0:8:9.01:86,9,0	1/1:3,0:3:6:56,6,0	0/1:11,0:10:5.28:33,0,5	1/1:4,0:4:5.97:56,6,0	1/1:7,0:6:14.37:92,14,0	1/1:14,0:13:24.03:240,24,0	1/1:3,0:3:2.94:18,3,0	./.	1/1:8,0:8:12.01:114,12,0	0/1:6,0:6:6.90:29,0,7	1/1:4,0:4:5.84:55,6,0	1/1:1,5:6:8.97:71,9,0	1/1:4,0:4:3.57:52,4,0	1/1:3,0:3:5.90:37,6,0
chr10	60450959	.	CCAATGGA	C	20139.48	PASS	AC=40;AF=0.741;AN=54;BaseQRankSum=12.093;DP=512;FS=6.751;HRun=0;HaplotypeScore=134.7169;InbreedingCoeff=0.9542;MQ=90.59;MQ0=0;MQRankSum=-14.849;QD=57.05;ReadPosRankSum=3.658;VQSLOD=4.6574;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,13:14:27.09:727,27,0	1/1:0,12:12:24.08:647,24,0	0/0:25,0:25:72.25:0,72,2542	0/0:28,0:28:81.28:0,81,2656	1/1:3,15:18:27.09:724,27,0	0/0:28,0:28:81.28:0,81,3109	0/0:12,0:12:36.12:0,36,1475	1/1:9,28:37:78.25:1926,78,0	1/1:0,16:16:36.12:970,36,0	1/1:1,17:18:48.10:1104,48,0	1/1:1,20:21:45.15:1212,45,0	1/1:0,19:19:45.14:1212,45,0	1/1:1,13:14:33.11:889,33,0	1/1:0,16:16:39.13:1051,39,0	1/1:1,16:17:45.15:1211,45,0	1/1:2,13:15:33.11:889,33,0	1/1:2,6:8:15.05:404,15,0	1/1:0,2:2:3.01:81,3,0	1/1:3,13:16:33.11:856,33,0	1/1:1,30:31:84.29:2261,84,0	1/1:4,5:9:9.03:242,9,0	0/0:30,0:30:90.31:0,90,3446	0/0:23,0:23:69.24:0,69,2741	0/0:12,0:12:36.12:0,36,1437	1/1:0,18:18:39.13:1048,39,0	1/1:3,19:22:54.16:1311,54,0	1/1:5,25:30:50.89:1374,51,0	./.
chr10	60451165	.	G	GAT	316.87	PASS	AB=0.955;AC=12;AF=0.222;AN=54;BaseQRankSum=-2.618;DP=353;FS=14.119;HRun=0;HaplotypeScore=172.1908;InbreedingCoeff=-0.1216;MQ=48.85;MQ0=2;MQRankSum=8.825;QD=1.91;ReadPosRankSum=-1.230;VQSLOD=1.7197;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:7.49:0,7,27	0/0:7,0:7:5.64:0,6,33	0/1:5,0:5:5.98:6,0,23	0/0:2,0:2:3:0,3,28	0/1:21,0:21:14.96:15,0,53	0/0:19,1:20:25.10:0,25,102	0/0:6,0:6:9.86:0,10,36	0/1:33,1:31:37.12:126,0,37	0/0:11,0:11:21.32:0,21,74	0/1:11,1:12:4.12:87,0,4	0/0:17,0:17:19.92:0,20,100	0/0:13,0:13:11.12:0,11,80	0/1:6,0:6:14.86:38,0,15	0/0:5,0:5:0.48:0,0,11	0/0:13,0:13:5.96:0,6,45	0/0:6,0:6:3.36:0,3,19	./.	0/0:3,0:3:4.41:0,4,15	0/1:18,1:15:8.79:73,0,9	0/0:25,3:28:27.78:0,28,130	0/1:8,1:9:0.40:0,0,6	0/0:14,2:16:9.33:0,9,63	0/1:20,1:21:16.30:16,0,47	1/1:5,2:7:0.24:46,0,0	0/1:15,1:16:2.89:3,0,37	0/1:14,1:15:23.70:35,0,24	0/0:20,0:20:6.17:0,6,60	0/0:5,0:5:3.58:0,4,14
chr10	60451674	.	A	AC	24178.35	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-7.716;DP=627;FS=28.949;HRun=0;HaplotypeScore=78.8478;InbreedingCoeff=0.9823;MQ=81.10;MQ0=0;MQRankSum=-9.129;QD=41.69;ReadPosRankSum=6.145;VQSLOD=2.6923;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,28:28:78.27:1219,78,0	1/1:0,9:9:27.09:422,27,0	0/0:28,0:27:71.94:0,72,922	0/0:19,0:19:51.11:0,51,643	1/1:0,33:33:90.20:1363,90,0	1/1:0,31:31:81.28:1266,81,0	1/1:1,11:12:27.09:422,27,0	1/1:2,39:41:99:1778,120,0	1/1:0,22:22:63.21:985,63,0	1/1:0,25:25:75.24:1149,75,0	1/1:1,22:23:57.19:878,57,0	1/1:0,17:17:51.17:798,51,0	1/1:1,20:21:51.17:797,51,0	1/1:1,16:17:45.15:704,45,0	1/1:0,32:32:75.26:1173,75,0	1/1:0,13:13:36.12:563,36,0	1/1:3,26:29:72.71:1109,73,0	1/1:3,14:17:25.78:545,26,0	1/1:0,21:21:63.20:960,63,0	1/1:0,36:36:99:1565,105,0	1/1:0,10:10:30.10:469,30,0	1/1:2,17:19:51.17:796,51,0	1/1:1,19:20:48.06:720,48,0	1/1:0,17:17:51.17:797,51,0	1/1:1,22:23:63.21:985,63,0	1/1:0,22:22:66.22:1025,66,0	1/1:0,37:37:96.33:1501,96,0	1/1:0,5:5:12.04:187,12,0
chr10	60452006	.	G	GTTTT	16365.07	PASS	AB=0.600;AC=51;AF=0.911;AN=56;BaseQRankSum=-3.460;DP=507;FS=15.220;HRun=10;HaplotypeScore=94.1187;InbreedingCoeff=0.5223;MQ=65.82;MQ0=2;MQRankSum=-3.282;QD=33.26;ReadPosRankSum=-0.262;VQSLOD=1.8402;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,5:10:12.04:248,12,0	1/1:3,2:6:9.03:201,9,0	0/0:11,0:11:6.03:0,6,118	0/0:4,0:4:2.40:0,2,41	1/1:13,14:31:58.92:1043,59,0	1/1:14,0:27:42.14:786,42,0	1/1:7,2:15:23.87:465,24,0	1/1:13,0:35:52.54:395,53,0	1/1:5,13:22:48.13:992,48,0	1/1:7,15:23:54.17:1126,54,0	1/1:8,11:21:40.93:737,41,0	1/1:2,5:9:12.04:237,12,0	1/1:6,11:20:28.91:620,29,0	1/1:5,13:23:27.09:537,27,0	0/1:7,14:23:18.67:819,0,19	1/1:2,11:16:36.12:767,36,0	1/1:0,5:6:12.04:283,12,0	1/1:5,3:8:9.03:212,9,0	1/1:16,8:27:51.60:1004,52,0	1/1:8,12:24:51.17:1037,51,0	1/1:2,6:8:15.52:306,16,0	1/1:6,0:17:39.09:654,39,0	1/1:7,0:17:18.06:330,18,0	1/1:3,1:14:24.55:460,25,0	1/1:4,14:22:36.12:700,36,0	1/1:11,13:25:57.20:1217,57,0	1/1:8,19:31:51.13:1049,51,0	1/1:1,4:9:6.02:141,6,0
chr10	60453995	.	GTGT	G	1704.05	PASS	AB=0.990;AC=26;AF=0.464;AN=56;BaseQRankSum=5.455;DP=463;FS=5.429;HRun=0;HaplotypeScore=103.5697;InbreedingCoeff=-0.2636;MQ=65.08;MQ0=4;MQRankSum=-2.293;QD=4.59;ReadPosRankSum=7.060;VQSLOD=1.0230;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:9,0:10:46.83:56,0,47	0/1:5,0:5:11.03:35,0,11	0/0:10,0:8:21.03:0,21,281	0/0:11,0:8:12.94:0,13,156	0/1:37,0:36:96.79:140,0,97	0/0:19,0:19:14.53:0,15,94	0/1:16,0:16:2.48:2,0,63	0/0:21,0:21:40.49:0,40,263	1/1:16,0:15:7.98:109,8,0	0/1:28,0:28:99:107,0,134	0/1:17,0:17:63.78:64,0,89	0/1:11,2:13:2.21:152,0,2	0/1:11,0:11:14.85:43,0,15	0/1:10,0:10:47.02:47,0,55	0/1:15,0:15:47.08:47,0,50	0/1:19,0:19:21.87:103,0,22	0/1:10,0:10:4.48:61,0,4	1/1:5,0:5:10.74:45,11,0	0/1:11,0:11:48.83:49,0,76	0/1:29,0:29:98.25:188,0,98	0/1:14,0:14:57.47:57,0,104	0/0:21,0:21:0.05:0,0,82	0/1:27,0:26:3.73:4,0,43	0/0:10,0:10:9.08:0,9,34	0/1:16,0:16:20.83:65,0,21	1/1:14,0:14:7.91:119,8,0	1/1:29,1:29:40.98:258,41,0	0/1:17,1:18:41.65:118,0,42
chr10	60453997	.	GTTT	G	8011.65	PASS	AB=0.570;AC=50;AF=0.893;AN=56;BaseQRankSum=-2.923;DP=457;FS=1.964;HRun=14;HaplotypeScore=84.4999;InbreedingCoeff=0.6239;MQ=65.34;MQ0=3;MQRankSum=-1.684;QD=18.38;ReadPosRankSum=5.206;VQSLOD=4.0357;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:3,6:9:12.22:189,0,12	1/1:1,4:5:12.02:140,12,0	0/0:8,0:7:15.05:0,15,224	0/0:12,0:9:7.65:0,8,111	1/1:5,29:35:55.34:630,55,0	1/1:3,0:19:38.22:231,38,0	1/1:4,0:16:26.38:158,26,0	0/1:3,1:20:4.36:4,0,83	1/1:2,15:16:33.03:386,33,0	1/1:7,19:27:49.48:582,49,0	1/1:4,13:18:26.84:300,27,0	1/1:3,8:12:25.63:309,26,0	1/1:1,8:11:19.50:226,20,0	1/1:3,5:10:16.51:190,17,0	1/1:4,10:15:18.56:224,19,0	1/1:3,15:19:38.99:439,39,0	1/1:3,7:10:17.74:210,18,0	1/1:0,5:5:12.04:140,12,0	1/1:3,7:10:17.98:200,18,0	1/1:7,22:30:58.59:697,59,0	1/1:6,8:14:24:281,24,0	1/1:3,0:21:37.37:219,37,0	1/1:1,0:26:59.26:354,59,0	1/1:2,0:10:14.70:89,15,0	1/1:2,9:15:28.38:282,28,0	1/1:2,14:16:33.63:416,34,0	1/1:4,25:28:48.65:750,49,0	1/1:2,11:15:31.59:365,32,0
chr10	60454353	.	TCTC	T	8918.43	PASS	AB=0.734;AC=44;AF=0.786;AN=56;BaseQRankSum=-3.700;DP=603;FS=1.898;HRun=0;HaplotypeScore=83.0212;InbreedingCoeff=-0.0376;MQ=57.57;MQ0=70;MQRankSum=2.859;QD=15.09;ReadPosRankSum=6.079;VQSLOD=4.0440;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:10,13:20:1.87:278,0,2	1/1:1,7:8:18.06:259,18,0	0/1:29,0:14:1.17:1,0,122	0/0:12,0:5:5.98:0,6,61	1/1:2,28:29:48.72:644,49,0	0/1:13,13:20:22.08:318,0,22	0/1:12,7:12:93.58:114,0,94	1/1:19,13:26:9.40:267,9,0	1/1:5,21:24:36.09:496,36,0	1/1:8,14:21:42.09:520,42,0	1/1:3,18:19:48.16:690,48,0	0/1:12,11:15:75.66:270,0,76	0/1:15,9:17:32.75:198,0,33	0/1:11,9:13:31.98:238,0,32	1/1:5,11:16:24.08:345,24,0	1/1:4,11:15:15.05:216,15,0	1/1:11,12:19:0.42:213,0,0	0/1:9,5:11:17.60:198,0,18	1/1:6,10:15:30.09:409,30,0	1/1:8,15:22:38.91:445,39,0	1/1:3,6:8:9.03:129,9,0	1/1:15,13:18:24.04:322,24,0	0/1:15,15:22:62.80:372,0,63	0/1:21,5:14:32.15:189,0,32	1/1:8,9:16:15.05:216,15,0	1/1:3,16:17:48.15:666,48,0	1/1:8,21:27:33.11:475,33,0	1/1:5,17:22:30.10:431,30,0
chr10	60454487	.	TCTCCTTCTCCTTCTCCTTCTC	T	12465.82	PASS	AB=0.961;AC=47;AF=0.839;AN=56;BaseQRankSum=-1.930;DP=465;FS=0.000;HRun=0;HaplotypeScore=112.7841;InbreedingCoeff=0.1734;MQ=33.01;MQ0=182;MQRankSum=4.477;QD=28.20;ReadPosRankSum=-0.398;VQSLOD=2.9834;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:21,0:8:0.12:98,0,0	1/1:7,0:4:12.04:363,12,0	0/0:12,0:1:3.01:0,3,91	0/0:11,0:1:3.01:0,3,36	1/1:13,0:9:15.39:456,15,0	1/1:15,0:11:33.11:1010,33,0	0/1:16,0:7:44.78:399,0,45	0/1:22,7:12:24.47:333,0,24	1/1:7,0:4:9.03:275,9,0	1/1:11,0:6:18.06:658,18,0	1/1:9,18:20:32.60:558,33,0	1/1:10,0:3:6.02:206,6,0	0/1:16,0:7:9.35:380,0,9	1/1:8,0:5:14.92:420,15,0	1/1:12,0:8:18.72:606,19,0	1/1:12,0:8:18.06:626,18,0	1/1:22,0:4:6:147,6,0	1/1:19,0:10:11.97:328,12,0	1/1:7,6:8:17.99:394,18,0	1/1:6,12:12:18.01:365,18,0	1/1:16,0:7:6.81:202,7,0	1/1:23,0:5:15.05:430,15,0	0/1:18,0:5:41.35:401,0,41	1/1:37,0:9:11.49:173,11,0	1/1:13,0:10:21.73:765,22,0	1/1:7,9:9:23.79:737,24,0	1/1:23,0:17:51.18:1549,51,0	1/1:19,0:8:18.06:589,18,0
chr10	60456729	.	TAC	T	879.50	PASS	AB=1.000;AC=42;AF=0.875;AN=48;BaseQRankSum=1.453;DP=113;FS=6.822;HRun=0;HaplotypeScore=29.1365;InbreedingCoeff=0.2393;MQ=87.87;MQ0=2;MQRankSum=2.210;QD=11.42;ReadPosRankSum=-1.840;VQSLOD=1.5856;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,0:5:5.98:47,6,0	1/1:1,0:1:3:25,3,0	0/0:13,0:13:12.35:0,12,181	0/0:17,0:13:2.92:0,3,119	1/1:6,0:6:11.98:97,12,0	./.	1/1:1,0:1:2.99:24,3,0	1/1:12,0:11:24.16:156,24,0	./.	1/1:2,0:2:0.47:1,0,0	./.	1/1:6,0:6:14.94:119,15,0	1/1:2,0:2:5.98:47,6,0	1/1:2,0:2:2.99:24,3,0	1/1:2,0:2:3:25,3,0	./.	1/1:3,0:3:2.99:24,3,0	0/1:3,0:3:14.24:19,0,14	0/1:3,0:2:0:0,0,0	1/1:7,0:7:11.97:96,12,0	1/1:1,0:1:2.99:24,3,0	1/1:1,0:1:3:25,3,0	1/1:5,0:5:8.50:73,9,0	1/1:1,0:1:2.99:24,3,0	1/1:4,0:3:5.99:50,6,0	1/1:2,0:2:3:27,3,0	1/1:6,0:6:5.49:47,5,0	1/1:2,0:2:2.97:20,3,0
chr10	60458429	.	A	AT	2869.42	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-12.666;DP=596;FS=6.985;HRun=8;HaplotypeScore=59.5280;InbreedingCoeff=0.9974;MQ=62.48;MQ0=0;MQRankSum=1.190;QD=21.57;ReadPosRankSum=-1.767;VQSLOD=3.2517;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:50.98:0,51,460	0/0:16,0:16:42.02:0,42,384	0/0:19,0:17:36.01:0,36,328	0/0:17,0:17:41.73:0,42,357	0/0:21,0:21:60.03:0,60,549	1/1:4,27:31:75.22:866,75,0	1/1:2,11:13:24.07:277,24,0	1/1:8,20:28:60.16:681,60,0	0/0:23,0:23:66.03:0,66,604	0/0:27,0:27:72.01:0,72,650	0/0:26,0:26:71.58:0,72,653	0/0:20,0:21:54.01:0,54,489	0/0:13,0:13:30.01:0,30,275	0/0:19,0:19:54.03:0,54,494	0/0:11,0:11:33.02:0,33,302	0/0:17,0:17:45.01:0,45,408	0/0:26,0:26:65.96:0,66,603	0/0:15,0:15:39.02:0,39,356	0/0:20,0:20:51.03:0,51,467	0/0:26,0:26:72.03:0,72,659	0/0:23,0:23:57.03:0,57,521	1/1:5,22:27:54.12:608,54,0	1/1:5,10:16:20.55:252,21,0	1/1:4,14:18:27.99:373,28,0	0/0:21,0:21:60.03:0,60,549	0/0:33,0:33:93.05:0,93,851	0/0:37,0:36:99:0,111,1007	0/0:8,0:8:21.01:0,21,192
chr10	60463047	.	GA	G	148.24	PASS	AC=6;AF=0.158;AN=38;BaseQRankSum=0.517;DP=351;FS=3.806;HRun=3;HaplotypeScore=23.4219;InbreedingCoeff=0.5504;MQ=19.91;MQ0=131;MQRankSum=-0.862;QD=8.72;ReadPosRankSum=-0.402;VQSLOD=0.5891;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:12:14.94:0,15,167	./.	./.	./.	./.	1/1:2,4:4:9.03:111,9,0	1/1:3,3:3:9.03:111,9,0	./.	0/0:15,0:6:12.04:0,12,172	0/0:20,0:7:12.02:0,12,139	0/0:16,0:4:2.94:0,3,18	0/0:6,0:3:3.01:0,3,43	0/0:17,0:8:11.98:0,12,149	0/0:8,0:5:6.02:0,6,86	0/0:18,0:9:11.93:0,12,145	0/0:16,0:11:15.05:0,15,215	0/0:18,0:6:3.01:0,3,43	0/0:12,0:3:8.96:0,9,104	0/0:10,0:5:6.02:0,6,86	./.	0/0:16,0:6:15.05:0,15,215	./.	1/1:5,0:2:5.92:39,6,0	./.	./.	0/0:11,0:5:15.01:0,15,192	0/0:18,0:7:2.80:0,3,43	0/0:11,0:6:6.02:0,6,86
chr10	60463992	.	T	TA	3540.65	PASS	AB=0.653;AC=41;AF=0.820;AN=50;BaseQRankSum=-2.178;DP=370;FS=9.067;HRun=5;HaplotypeScore=28.8809;InbreedingCoeff=0.1308;MQ=27.57;MQ0=99;MQRankSum=-1.629;QD=10.66;ReadPosRankSum=-0.029;VQSLOD=-0.0001;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,11:9:12.04:157,12,0	1/1:0,9:7:15.05:197,15,0	0/1:12,1:6:7.96:8,0,53	0/0:10,1:3:6.02:0,6,64	1/1:4,14:11:21.04:276,21,0	0/1:2,9:4:26.17:33,0,26	./.	./.	1/1:5,11:10:9.03:118,9,0	0/1:7,12:13:5.16:288,0,5	1/1:4,21:17:33.11:430,33,0	1/1:1,10:3:6.02:79,6,0	./.	1/1:2,7:4:6.02:79,6,0	0/1:4,9:7:26.19:33,0,26	0/1:4,10:5:20.21:81,0,20	1/1:3,7:7:9.03:118,9,0	1/1:3,3:4:3.01:39,3,0	1/1:10,3:3:6.02:79,6,0	1/1:2,21:17:39.13:512,39,0	1/1:3,5:5:6.02:79,6,0	1/1:4,16:10:17.97:210,18,0	1/1:6,17:11:12:138,12,0	1/1:6,8:8:3.01:37,3,0	1/1:0,7:6:15.05:197,15,0	1/1:6,13:8:12.04:157,12,0	1/1:3,13:6:15.05:193,15,0	0/0:4,0:2:3.01:0,3,32
chr10	60465308	.	A	AAT	9855.60	PASS	AB=0.637;AC=50;AF=0.893;AN=56;BaseQRankSum=-5.698;DP=280;FS=30.541;HRun=0;HaplotypeScore=41.7080;InbreedingCoeff=0.5352;MQ=74.00;MQ0=2;MQRankSum=-0.896;QD=38.95;ReadPosRankSum=3.459;VQSLOD=3.5617;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,13:15:39.05:650,39,0	1/1:0,2:2:6.02:106,6,0	0/0:16,0:9:20.52:0,21,205	0/0:11,0:7:12.04:0,12,177	1/1:0,13:14:39.13:687,39,0	1/1:3,0:11:21.15:234,21,0	0/1:6,0:9:20.73:88,0,21	1/1:3,0:17:41.50:393,42,0	1/1:1,11:12:30.10:528,30,0	0/1:1,10:11:11.01:442,0,11	1/1:3,13:15:38.97:591,39,0	1/1:0,5:5:15.05:264,15,0	1/1:0,2:2:6.02:106,6,0	1/1:0,7:7:21.07:368,21,0	1/1:0,8:8:18.06:317,18,0	1/1:1,6:7:15.04:264,15,0	1/1:1,11:12:33.11:581,33,0	1/1:0,10:10:24.08:408,24,0	1/1:0,14:15:45.09:718,45,0	1/1:0,5:7:20.81:328,21,0	1/1:1,14:14:39.13:685,39,0	1/1:0,0:3:8.99:77,9,0	1/1:3,0:10:28.73:230,29,0	1/1:2,0:5:11.48:86,11,0	1/1:1,8:9:21.07:369,21,0	1/1:0,9:9:27.08:436,27,0	1/1:0,10:10:30.10:528,30,0	1/1:0,10:10:21.07:370,21,0
chr10	60465313	.	TA	T	502.29	PASS	AB=0.800;AC=9;AF=0.161;AN=56;BaseQRankSum=5.748;DP=268;FS=3.410;HRun=7;HaplotypeScore=65.3115;InbreedingCoeff=0.7747;MQ=78.11;MQ0=2;MQRankSum=-2.291;QD=14.77;ReadPosRankSum=1.554;VQSLOD=3.5238;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:33.11:0,33,415	0/0:3,0:3:9.03:0,9,113	0/0:18,0:12:23.75:0,24,195	0/0:9,0:7:14.88:0,15,158	0/0:16,0:16:48.15:0,48,600	1/1:2,9:10:11.21:244,11,0	0/1:6,2:8:41.45:45,0,41	0/0:16,0:15:42.13:0,42,527	0/0:13,0:13:36.11:0,36,452	0/0:11,0:11:24.07:0,24,291	0/0:14,0:13:33.10:0,33,409	0/0:5,0:5:15.04:0,15,178	0/0:3,0:3:8.99:0,9,95	0/0:7,0:7:21.05:0,21,251	0/0:8,0:8:21.07:0,21,264	0/0:5,0:5:15.05:0,15,189	0/0:12,0:12:33.10:0,33,403	0/0:9,0:9:24.08:0,24,300	0/0:14,0:14:39.12:0,39,487	0/0:6,0:6:12:0,12,133	0/0:13,0:13:33.10:0,33,403	1/1:0,3:3:9:85,9,0	1/1:1,8:9:21.02:199,21,0	1/1:0,3:3:8.99:82,9,0	0/0:10,0:10:27.04:0,27,321	0/0:9,0:9:27.09:0,27,339	0/0:10,0:10:30.10:0,30,378	0/0:10,0:10:21.07:0,21,264
chr10	60465321	.	G	GA	80.58	PASS	AB=0.801;AC=2;AF=0.036;AN=56;BaseQRankSum=2.292;DP=270;FS=29.229;HRun=7;HaplotypeScore=61.8549;InbreedingCoeff=-0.0505;MQ=78.65;MQ0=1;MQRankSum=-3.586;QD=4.24;ReadPosRankSum=-0.163;VQSLOD=-0.5991;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:33.11:0,33,461	0/0:3,0:3:9.03:0,9,126	0/0:18,0:13:32.09:0,32,303	0/0:7,0:6:14.98:0,15,157	0/0:19,0:19:57.18:0,57,779	0/1:9,1:10:17.28:17,0,291	0/1:5,4:9:99:150,0,170	0/0:19,0:18:48.15:0,48,655	0/0:14,0:14:39.13:0,39,543	0/0:9,0:9:27.08:0,27,363	0/0:13,0:13:36.12:0,36,502	0/0:4,0:4:12.04:0,12,168	0/0:3,0:3:9.03:0,9,121	0/0:6,0:6:18.03:0,18,231	0/0:8,0:8:21.07:0,21,294	0/0:7,0:7:18.06:0,18,251	0/0:11,0:11:33.11:0,33,461	0/0:10,0:10:27.09:0,27,377	0/0:18,0:18:54.14:0,54,730	0/0:3,0:3:9.03:0,9,126	0/0:13,0:13:39.12:0,39,528	0/0:3,0:3:9.03:0,9,110	0/0:8,0:8:21.06:0,21,252	0/0:3,0:3:9.03:0,9,112	0/0:10,0:10:24.08:0,24,336	0/0:9,0:9:27.09:0,27,377	0/0:11,0:11:30.10:0,30,420	0/0:10,0:10:21.07:0,21,294
chr10	60471326	.	A	AC	66.55	PASS	AC=4;AF=0.50;AN=8;BaseQRankSum=-0.185;DP=165;FS=2.932;HRun=0;HaplotypeScore=5.5574;MQ=50.29;MQ0=58;MQRankSum=-2.589;QD=7.39;ReadPosRankSum=2.404;VQSLOD=2.8816;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:11,0:4:12:0,12,146	0/0:21,0:6:14.97:0,15,166	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	1/1:5,3:3:6.02:95,6,0	./.	./.	./.	./.	1/1:0,1:1:3.01:48,3,0	./.	./.	./.
chr10	60473545	.	T	TA	8620.35	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-3.023;DP=335;FS=22.485;HRun=9;HaplotypeScore=41.6492;InbreedingCoeff=0.6999;MQ=48.24;MQ0=2;MQRankSum=0.451;QD=26.69;ReadPosRankSum=1.741;VQSLOD=3.3450;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,17:19:57.06:595,57,0	1/1:0,11:11:30.08:332,30,0	0/0:8,0:3:8.92:0,9,69	0/0:4,0:2:5.84:0,6,40	1/1:1,15:16:39.10:427,39,0	1/1:3,1:4:12.03:133,12,0	1/1:7,1:8:2.35:180,2,0	1/1:3,17:19:51.14:562,51,0	1/1:1,16:17:42.11:464,42,0	1/1:2,11:13:30.08:332,30,0	1/1:4,23:27:49.08:747,49,0	1/1:0,5:5:9.02:100,9,0	1/1:1,7:8:21.06:232,21,0	1/1:1,11:11:30.08:331,30,0	1/1:0,10:10:30.08:331,30,0	1/1:2,5:7:15.04:165,15,0	1/1:0,3:3:9.02:100,9,0	1/1:0,4:4:12.03:133,12,0	1/1:5,7:12:21.06:232,21,0	1/1:2,21:23:57.15:630,57,0	1/1:0,3:3:9.02:100,9,0	1/1:13,1:14:11.31:340,11,0	1/1:16,4:20:42.07:449,42,0	1/1:7,2:9:18.05:198,18,0	1/1:2,15:16:36.10:398,36,0	1/1:0,11:11:33.09:365,33,0	1/1:3,12:15:33.09:365,33,0	1/1:1,11:13:35.93:379,36,0
chr10	60473559	.	GA	G	1580.76	PASS	AB=0.875;AC=11;AF=0.196;AN=56;BaseQRankSum=3.183;DP=364;FS=7.707;HRun=8;HaplotypeScore=67.5164;InbreedingCoeff=0.8576;MQ=56.74;MQ0=0;MQRankSum=-0.923;QD=20.27;ReadPosRankSum=-0.265;VQSLOD=3.4157;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:60.14:0,60,708	0/0:13,0:13:39.12:0,39,470	0/0:11,0:6:15.03:0,15,167	0/0:5,0:3:9.03:0,9,104	0/0:19,0:19:45.60:0,46,533	1/1:4,2:6:15.02:145,15,0	0/1:6,1:7:5.28:153,0,5	1/1:4,15:19:45.02:423,45,0	0/0:19,0:19:51.12:0,51,600	0/0:13,0:13:39.12:0,39,470	0/0:27,0:27:75.19:0,75,889	0/0:5,0:5:6.02:0,6,72	0/0:10,0:10:30.09:0,30,359	0/0:11,0:10:30.09:0,30,362	0/0:10,0:10:26.99:0,27,293	0/0:9,0:8:24.07:0,24,290	0/0:5,0:5:15:0,15,163	0/0:4,0:4:12.04:0,12,145	0/0:12,0:12:36.11:0,36,432	0/0:24,0:24:69.17:0,69,816	0/0:4,0:4:12.02:0,12,133	1/1:11,5:16:45.07:433,45,0	1/1:18,3:21:45.06:431,45,0	1/1:7,2:9:18.03:173,18,0	0/0:20,0:19:48.15:0,48,579	0/0:15,0:15:39.12:0,39,467	0/0:17,0:17:48.15:0,48,579	0/0:13,0:13:33.03:0,33,367
chr10	60475198	.	T	TAA	11083.60	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-10.698;DP=515;FS=4.322;HRun=8;HaplotypeScore=58.8754;InbreedingCoeff=0.9543;MQ=61.56;MQ0=9;MQRankSum=-0.723;QD=31.22;ReadPosRankSum=3.555;VQSLOD=4.9196;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,12:13:27.09:428,27,0	1/1:0,8:8:20.62:333,21,0	0/0:21,0:19:22.26:0,22,483	0/0:7,0:5:5.86:0,6,47	1/1:7,30:36:81.23:1258,81,0	0/0:19,0:19:20.51:0,21,434	0/0:14,0:14:36.10:0,36,401	0/0:32,0:32:78.16:0,78,852	1/1:2,15:17:42.14:667,42,0	1/1:4,16:19:8.70:586,9,0	1/1:4,19:22:48.08:706,48,0	1/1:0,10:11:32.55:454,33,0	1/1:2,13:16:26.67:428,27,0	1/1:3,13:17:30.10:476,30,0	1/1:3,11:14:21.03:306,21,0	1/1:1,12:12:30.53:449,31,0	1/1:5,17:25:38.92:750,39,0	1/1:1,15:15:33.11:513,33,0	1/1:8,16:22:42.13:640,42,0	1/1:3,17:20:51.14:769,51,0	1/1:1,4:6:9.03:143,9,0	0/0:23,0:23:49:0,49,537	0/0:21,0:21:36.04:0,36,392	0/0:23,0:23:57.14:0,57,635	1/1:2,7:12:14.54:199,15,0	1/1:1,21:23:66.19:979,66,0	1/1:4,26:30:45.06:714,45,0	1/1:1,7:7:18.06:286,18,0
chr10	60477308	.	AT	A	1134.70	PASS	AB=0.973;AC=29;AF=0.537;AN=54;BaseQRankSum=7.340;DP=281;FS=2.702;HRun=1;HaplotypeScore=59.3623;InbreedingCoeff=-0.2240;MQ=58.01;MQ0=2;MQRankSum=-5.116;QD=4.47;ReadPosRankSum=9.100;VQSLOD=0.1081;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:19,0:19:27.41:79,0,27	./.	0/0:7,0:7:17.95:0,18,180	0/0:4,0:4:8.99:0,9,81	0/1:15,0:16:18.87:75,0,19	0/1:10,0:10:25.20:28,0,25	1/1:11,0:11:3.50:81,3,0	0/1:11,0:10:1.85:24,0,2	0/1:7,0:7:8.31:39,0,8	0/0:10,0:10:9.84:0,10,108	1/1:8,0:8:18.57:66,19,0	0/1:12,1:13:67.83:91,0,68	0/1:11,0:11:3.27:45,0,3	0/1:4,0:4:9.97:18,0,10	0/1:16,0:16:38.82:39,0,63	0/1:6,0:5:2.45:2,0,36	1/1:18,1:19:32.75:213,33,0	0/1:8,1:9:12.48:48,0,12	1/1:13,0:11:23.98:104,24,0	0/1:13,1:14:45.04:45,0,90	0/1:18,0:18:30.28:67,0,30	0/0:6,0:6:2.28:0,2,65	0/1:7,0:7:11.80:20,0,12	0/1:9,0:9:3.95:29,0,4	1/1:9,0:9:19.21:60,19,0	0/1:9,1:10:8.70:34,0,9	0/1:11,1:11:47.58:69,0,48	1/1:2,0:2:4.90:17,5,0
chr10	60477309	.	TG	T	5780.65	PASS	AC=50;AF=0.926;AN=54;BaseQRankSum=-3.200;DP=290;FS=14.108;HRun=7;HaplotypeScore=48.8580;InbreedingCoeff=0.6759;MQ=57.83;MQ0=2;MQRankSum=-4.171;QD=20.65;ReadPosRankSum=1.213;VQSLOD=3.2606;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,14:21:42.08:427,42,0	./.	0/0:7,0:7:14.77:0,15,139	0/0:3,0:3:3.01:0,3,30	1/1:7,11:18:30.06:305,30,0	1/1:4,7:11:18.04:183,18,0	1/1:1,10:11:30.06:305,30,0	1/1:2,7:9:26.08:246,26,0	1/1:4,5:9:18.03:183,18,0	1/1:6,5:11:18.01:175,18,0	1/1:1,8:9:26.85:256,27,0	1/1:5,8:13:21.03:213,21,0	1/1:1,10:11:24.05:245,24,0	1/1:1,3:4:6.01:61,6,0	1/1:5,10:15:33.07:336,33,0	1/1:2,4:5:5.97:50,6,0	1/1:3,17:20:54.11:546,54,0	1/1:5,4:8:12:114,12,0	1/1:2,11:11:30.06:305,30,0	1/1:7,7:14:21.03:210,21,0	1/1:4,13:17:42.07:420,42,0	1/1:3,3:6:5.55:60,6,0	1/1:4,4:8:18.02:177,18,0	1/1:3,7:10:15.03:153,15,0	1/1:1,8:9:27.06:275,27,0	1/1:7,3:10:24.04:237,24,0	1/1:5,8:13:24.04:239,24,0	1/1:0,2:2:6.01:61,6,0
chr10	60477353	.	TA	T	2244.57	PASS	AB=0.977;AC=46;AF=0.821;AN=56;BaseQRankSum=3.451;DP=304;FS=0.883;HRun=1;HaplotypeScore=72.7967;InbreedingCoeff=-0.1049;MQ=39.14;MQ0=7;MQRankSum=-2.851;QD=7.51;ReadPosRankSum=4.322;VQSLOD=1.0478;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:17,0:17:24.89:81,0,25	1/1:1,0:1:2.80:13,3,0	0/1:9,0:4:1.93:32,0,2	0/0:5,0:1:0:0,0,0	1/1:26,1:24:17.26:148,17,0	1/1:12,0:12:30.27:144,30,0	0/1:7,2:9:16.61:114,0,17	1/1:17,0:15:6.49:109,6,0	1/1:13,0:13:33.01:169,33,0	1/1:9,1:9:19.91:134,20,0	1/1:13,0:13:28.76:128,29,0	1/1:14,0:12:25.40:135,25,0	0/1:5,0:5:13.58:28,0,14	1/1:8,0:5:11.52:66,12,0	0/1:6,0:6:32.53:42,0,33	1/1:8,0:6:7.66:31,8,0	0/1:18,0:17:17:111,0,17	1/1:6,0:5:10.31:42,10,0	1/1:16,1:15:9.59:86,10,0	1/1:11,0:11:24.71:123,25,0	0/1:9,0:8:12.53:13,0,15	0/1:6,0:6:11.86:47,0,12	1/1:12,0:12:22.18:110,22,0	1/1:6,0:6:13.48:61,13,0	1/1:13,0:13:9.31:114,9,0	1/1:14,0:13:13.89:125,14,0	1/1:11,0:10:19.17:92,19,0	1/1:7,0:7:18.65:81,19,0
chr10	60477407	.	T	TG	12128.26	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-0.866;DP=374;FS=1.905;HRun=2;HaplotypeScore=53.0635;InbreedingCoeff=0.8823;MQ=58.44;MQ0=4;MQRankSum=-0.331;QD=35.67;ReadPosRankSum=2.913;VQSLOD=5.3431;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,15:18:45.13:611,45,0	1/1:0,4:4:9.03:129,9,0	0/0:17,0:12:13.54:0,14,313	0/0:16,0:12:30.09:0,30,367	1/1:1,26:25:71.81:947,72,0	1/1:1,17:18:51.17:733,51,0	1/1:2,8:10:24.04:317,24,0	1/1:4,13:17:48.14:656,48,0	1/1:5,9:14:33.10:449,33,0	1/1:2,16:17:48.16:685,48,0	1/1:0,21:21:57.11:794,57,0	1/1:0,12:12:27.02:362,27,0	1/1:0,4:4:9.03:129,9,0	1/1:0,10:7:18.06:259,18,0	1/1:0,13:13:39.13:561,39,0	1/1:0,6:6:15.05:216,15,0	1/1:0,12:12:33.11:474,33,0	1/1:2,7:9:24.08:340,24,0	1/1:4,14:18:45.11:605,45,0	1/1:1,12:13:33.11:475,33,0	1/1:2,8:10:24.05:323,24,0	1/1:1,6:7:9.03:129,9,0	1/1:0,14:14:35.97:466,36,0	1/1:0,5:6:15.04:198,15,0	1/1:3,14:17:48.15:672,48,0	1/1:0,16:15:42.14:604,42,0	1/1:0,19:18:48.16:690,48,0	1/1:0,7:7:21.07:302,21,0
chr10	60482780	.	GGTATATATATATATAT	G	2870.97	PASS	AB=0.751;AC=45;AF=0.865;AN=52;BaseQRankSum=-3.654;DP=162;FS=17.598;HRun=0;HaplotypeScore=61.8685;InbreedingCoeff=0.1790;MQ=85.38;MQ0=6;MQRankSum=-0.877;QD=24.33;ReadPosRankSum=1.468;VQSLOD=0.1826;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:2,0:2:5.99:48,6,0	1/1:0,1:1:3.01:145,3,0	0/0:15,0:5:12.01:0,12,110	0/0:28,0:12:23.42:0,23,181	1/1:6,0:6:11.81:96,12,0	1/1:10,0:14:38.88:718,39,0	./.	0/1:13,0:13:99:203,0,191	1/1:2,0:2:5.99:48,6,0	1/1:0,6:6:17.95:264,18,0	1/1:0,5:5:3.01:37,3,0	1/1:2,0:2:3:25,3,0	1/1:5,0:5:14.98:123,15,0	1/1:1,0:1:3:25,3,0	1/1:0,0:2:3.01:85,3,0	1/1:1,0:1:2.37:8,2,0	0/1:1,0:10:31.24:67,0,31	1/1:5,0:5:8.98:72,9,0	1/1:8,0:8:20.96:176,21,0	1/1:3,0:3:5.99:50,6,0	1/1:4,0:4:11.98:97,12,0	1/1:0,0:6:3.01:127,3,0	1/1:4,0:4:8.99:75,9,0	./.	1/1:0,0:7:3.01:85,3,0	1/1:1,0:1:3:27,3,0	1/1:2,0:2:5.99:48,6,0	0/1:5,2:8:89.22:360,0,89
chr10	60482798	.	TATATATATATATATATATATATATATAA	T	947.27	PASS	AC=4;AF=0.095;AN=42;BaseQRankSum=2.149;DP=114;FS=1.958;HRun=0;HaplotypeScore=78.1147;InbreedingCoeff=0.2623;MQ=65.35;MQ0=6;MQRankSum=-1.343;QD=135.32;ReadPosRankSum=3.342;VQSLOD=3.2304;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:1,0:1:3.01:0,3,196	0/0:1,0:1:3.01:0,3,60	0/0:14,0:2:2.50:0,2,9	0/0:27,0:9:20.54:0,21,238	0/0:3,0:3:3.44:0,3,21	1/1:0,4:4:12.04:834,12,0	./.	0/0:8,0:8:24.08:0,24,1145	./.	0/0:5,0:5:6.02:0,6,103	0/0:5,0:5:3.01:0,3,86	0/0:2,0:2:2.97:0,3,20	0/0:1,0:1:3.01:0,3,124	./.	0/0:2,0:2:3.01:0,3,100	./.	0/0:11,0:11:14.97:0,15,545	0/0:4,0:4:9:0,9,395	0/0:1,0:1:3.01:0,3,73	0/0:3,0:3:6.02:0,6,282	./.	1/1:2,1:3:3.01:209,3,0	./.	./.	0/0:7,0:7:3.01:0,3,100	0/0:1,0:1:3.01:0,3,175	0/0:2,0:2:3.01:0,3,151	0/0:9,0:9:27.09:0,27,1227
chr10	60483722	.	GAAAC	G	15686.66	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=11.202;DP=578;FS=1.526;HRun=0;HaplotypeScore=107.8912;InbreedingCoeff=0.9927;MQ=78.23;MQ0=0;MQRankSum=-4.738;QD=41.39;ReadPosRankSum=6.061;VQSLOD=5.2129;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,27:27:66.23:1165,66,0	1/1:0,6:6:12.04:212,12,0	0/0:28,0:29:66.45:0,66,1403	0/0:18,0:17:35.04:0,35,786	1/1:1,18:19:45.08:752,45,0	0/0:38,0:37:99:0,108,2621	0/0:14,0:14:42.14:0,42,1091	0/0:34,0:34:81.27:0,81,1964	1/1:2,13:15:39.13:681,39,0	1/1:0,28:28:84.28:1465,84,0	1/1:1,28:29:71.92:1141,72,0	1/1:3,11:14:27.09:485,27,0	1/1:3,13:16:33.11:588,33,0	1/1:3,18:21:45.15:808,45,0	1/1:2,14:16:33.11:592,33,0	1/1:0,17:17:36.12:646,36,0	1/1:4,10:14:27.09:485,27,0	1/1:0,7:7:18.06:323,18,0	1/1:3,19:22:57.02:935,57,0	1/1:5,34:39:93.25:1626,93,0	1/1:0,12:12:24.08:431,24,0	0/0:26,0:26:75.26:0,75,1892	0/0:21,0:21:57.20:0,57,1438	0/0:19,0:18:54.17:0,54,1331	1/1:3,15:18:39.13:698,39,0	1/1:0,19:19:57.18:985,57,0	1/1:0,24:24:56.99:1024,57,0	1/1:0,16:16:36.12:647,36,0
chr10	60485084	.	CT	C	2058.07	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=4.968;DP=486;FS=1.476;HRun=8;HaplotypeScore=73.2705;InbreedingCoeff=0.9663;MQ=80.28;MQ0=0;MQRankSum=-2.261;QD=23.93;ReadPosRankSum=1.687;VQSLOD=4.4154;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:40.92:0,41,464	0/0:3,0:3:9.03:0,9,109	0/0:16,0:16:24.84:0,25,385	0/0:15,0:15:10.33:0,10,270	0/0:32,0:32:93.28:0,93,1114	1/1:1,22:23:66.11:637,66,0	1/1:2,4:6:12.02:116,12,0	0/0:30,0:30:72.21:0,72,860	0/0:24,0:24:66.20:0,66,797	0/0:23,0:23:66.20:0,66,789	0/0:25,0:25:69.20:0,69,824	0/0:8,0:8:21.06:0,21,254	0/0:12,0:12:36.11:0,36,435	0/0:12,0:12:33.10:0,33,399	0/0:15,0:15:36.11:0,36,435	0/0:15,0:15:45.10:0,45,528	0/0:12,0:12:30.09:0,30,362	0/0:10,0:10:20.65:0,21,227	0/0:14,0:14:30.08:0,30,352	0/0:30,0:30:84.26:0,84,1015	0/0:12,0:12:30.09:0,30,362	1/1:2,13:15:36.06:348,36,0	1/1:1,27:28:75.12:724,75,0	1/1:0,14:14:42.07:406,42,0	0/0:20,0:20:57.17:0,57,688	0/0:18,0:18:54.16:0,54,643	0/0:24,0:24:72.20:0,72,855	0/0:12,0:12:30.09:0,30,362
chr10	60500213	.	TA	T	6912.15	PASS	AC=50;AF=0.962;AN=52;DP=291;FS=0.000;HRun=3;HaplotypeScore=183.7939;InbreedingCoeff=0.2968;MQ=37.85;MQ0=0;QD=23.92;VQSLOD=3.8944;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,11:11:26.99:237,27,0	./.	1/1:1,1:2:5.38:43,5,0	./.	1/1:2,7:9:20.59:170,21,0	1/1:0,19:19:57:504,57,0	1/1:2,5:7:14.99:129,15,0	1/1:6,32:38:99:1005,105,0	1/1:2,8:10:23.99:217,24,0	1/1:1,17:18:51.05:489,51,0	1/1:6,7:13:24:214,24,0	1/1:1,12:13:35.92:302,36,0	1/1:0,12:12:32.99:295,33,0	1/1:2,9:11:26.99:234,27,0	1/1:0,10:10:30:273,30,0	1/1:0,13:13:39:348,39,0	1/1:3,7:10:18:160,18,0	1/1:0,3:3:9.01:84,9,0	1/1:3,9:11:24.04:235,24,0	1/1:1,8:8:18.01:164,18,0	1/1:0,3:3:5.99:51,6,0	1/1:0,2:2:6.01:58,6,0	1/1:0,5:5:14.99:137,15,0	0/0:0,1:1:0:0,0,0	1/1:1,13:14:42.01:380,42,0	1/1:0,21:21:63.07:585,63,0	1/1:0,22:22:62.92:546,63,0	1/1:0,2:2:6:53,6,0
chr10	60500217	.	TG	T	6430.30	PASS	AC=50;AF=0.962;AN=52;DP=269;FS=0.000;HRun=3;HaplotypeScore=180.8226;InbreedingCoeff=0.2812;MQ=37.10;MQ0=0;QD=24.08;VQSLOD=3.9420;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,11:11:26.98:232,27,0	./.	1/1:1,1:2:4.56:38,5,0	./.	1/1:0,7:7:18:161,18,0	1/1:0,19:19:56.98:498,57,0	1/1:0,5:5:14.99:130,15,0	1/1:1,32:33:96.12:905,96,0	1/1:1,7:8:20.99:181,21,0	1/1:1,17:18:48.07:466,48,0	1/1:1,7:8:17.99:153,18,0	1/1:0,12:12:35.96:306,36,0	1/1:0,12:12:32.94:279,33,0	1/1:1,9:10:26.99:233,27,0	1/1:1,9:10:26.99:238,27,0	1/1:0,13:13:35.99:316,36,0	1/1:2,7:9:18:156,18,0	1/1:0,3:3:9:81,9,0	1/1:1,9:9:21.02:198,21,0	1/1:1,8:8:18:159,18,0	1/1:0,3:3:6:51,6,0	1/1:0,2:2:5.99:51,6,0	1/1:1,4:5:11.99:101,12,0	0/0:0,1:1:0:0,0,0	1/1:0,13:13:35.99:316,36,0	1/1:0,21:21:63.06:582,63,0	1/1:0,22:22:62.96:546,63,0	1/1:0,2:2:6:54,6,0
chr10	60500241	.	C	CA	12464.81	PASS	AB=0.857;AC=51;AF=0.981;AN=52;BaseQRankSum=0.915;DP=331;FS=6.066;HRun=1;HaplotypeScore=161.1034;InbreedingCoeff=-0.0292;MQ=54.03;MQ0=0;MQRankSum=-2.416;QD=37.89;ReadPosRankSum=0.721;VQSLOD=4.0191;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,15:17:39.09:558,39,0	./.	1/1:2,3:5:6.07:172,6,0	0/1:5,1:6:3.37:97,0,3	1/1:2,10:12:27.05:379,27,0	1/1:1,21:22:60.20:898,60,0	1/1:1,7:8:21.03:289,21,0	1/1:9,32:41:99:1584,114,0	1/1:0,10:10:30.07:425,30,0	1/1:1,11:12:33.11:494,33,0	1/1:0,9:9:24.04:334,24,0	1/1:2,13:15:42.10:595,42,0	1/1:1,9:10:27.09:404,27,0	1/1:1,12:13:33.11:493,33,0	1/1:1,11:12:36.09:514,36,0	1/1:1,14:15:39.10:559,39,0	1/1:1,10:11:33.07:468,33,0	1/1:1,5:6:15.05:224,15,0	1/1:2,13:14:39.05:556,39,0	1/1:3,4:6:18.06:269,18,0	1/1:0,1:1:2.97:20,3,0	./.	1/1:0,7:7:18.06:269,18,0	1/1:0,1:1:3.01:45,3,0	1/1:0,13:13:33.11:494,33,0	1/1:1,28:29:87.29:1297,87,0	1/1:0,26:26:66.14:937,66,0	1/1:3,3:6:6.02:90,6,0
chr10	60500394	.	C	CCA	21524.42	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-2.051;DP=407;FS=1.687;HRun=0;HaplotypeScore=62.0923;InbreedingCoeff=0.9656;MQ=74.59;MQ0=0;MQRankSum=-8.167;QD=56.49;ReadPosRankSum=4.236;VQSLOD=5.4072;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,15:15:42.10:811,42,0	1/1:1,8:9:24.08:487,24,0	0/0:11,0:11:33.11:0,33,515	0/0:15,0:15:37.29:0,37,587	1/1:1,15:16:48.12:930,48,0	1/1:0,20:20:60.16:1175,60,0	1/1:0,7:7:21.07:426,21,0	1/1:0,17:17:51.17:1010,51,0	1/1:2,11:14:33.11:663,33,0	1/1:0,21:21:63.18:1238,63,0	1/1:1,19:20:54.19:1096,54,0	1/1:0,13:13:39.13:790,39,0	1/1:0,12:12:30.10:608,30,0	1/1:0,15:15:45.15:912,45,0	1/1:0,16:16:42.14:851,42,0	1/1:3,15:18:51.18:1024,51,0	1/1:0,8:8:24.08:485,24,0	1/1:0,16:17:39.10:751,39,0	1/1:0,8:10:30.07:536,30,0	1/1:1,16:17:51.18:1027,51,0	1/1:1,15:16:42.14:853,42,0	1/1:0,7:7:21.04:386,21,0	1/1:0,6:6:18.06:365,18,0	1/1:0,6:6:15.05:305,15,0	1/1:1,23:24:66.23:1339,66,0	1/1:1,23:24:72.25:1454,72,0	1/1:1,27:29:87.30:1760,87,0	1/1:0,4:4:12.04:244,12,0
chr10	60502650	.	TAC	T	19105.32	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-4.538;DP=655;FS=0.000;HRun=0;HaplotypeScore=102.0127;InbreedingCoeff=0.9310;MQ=68.42;MQ0=5;MQRankSum=-4.675;QD=30.67;ReadPosRankSum=4.978;VQSLOD=6.7605;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,16:18:39.12:496,39,0	1/1:0,6:6:11.99:152,12,0	0/0:13,0:9:7.97:0,8,151	0/0:19,0:12:20.51:0,21,222	1/1:1,34:35:90.29:1142,90,0	1/1:2,29:30:78.25:993,78,0	1/1:2,13:15:33.11:420,33,0	1/1:8,33:41:96.27:1181,96,0	1/1:3,15:18:36.11:458,36,0	1/1:5,24:29:72.23:914,72,0	1/1:5,24:29:63.20:802,63,0	1/1:4,26:30:66.21:840,66,0	1/1:0,22:21:60.19:764,60,0	1/1:4,19:23:54.17:687,54,0	1/1:2,31:33:84.27:1069,84,0	1/1:2,23:25:63.20:802,63,0	1/1:1,5:6:15.05:191,15,0	1/1:1,10:11:30.10:381,30,0	1/1:3,17:19:48.13:595,48,0	1/1:2,45:47:99:1492,120,0	1/1:3,19:22:51.16:649,51,0	1/1:6,24:30:66.21:840,66,0	1/1:1,21:22:60.19:764,60,0	1/1:1,12:13:33.11:420,33,0	1/1:1,25:26:69.22:878,69,0	1/1:2,19:20:57.18:725,57,0	1/1:1,37:38:96.31:1221,96,0	1/1:6,6:12:18.06:229,18,0
chr10	60503815	.	TTTG	T	6668.11	PASS	AB=1.000;AC=44;AF=0.786;AN=56;BaseQRankSum=-1.434;DP=608;FS=1.740;HRun=0;HaplotypeScore=116.7637;InbreedingCoeff=0.4545;MQ=61.53;MQ0=7;MQRankSum=3.898;QD=13.26;ReadPosRankSum=4.855;VQSLOD=4.6500;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,26:35:24.08:350,24,0	1/1:2,8:10:8.62:131,9,0	0/0:36,1:26:35.20:0,35,407	0/0:43,0:25:41.85:0,42,499	1/1:14,8:22:6.02:87,6,0	0/1:13,0:13:31.77:94,0,32	0/1:22,0:22:92.44:110,0,92	0/0:12,0:12:24.02:0,24,222	1/1:2,21:23:36.12:525,36,0	1/1:7,14:21:35.60:322,36,0	1/1:7,9:16:6.02:87,6,0	1/1:3,16:20:33.07:457,33,0	1/1:4,22:26:38.87:536,39,0	1/1:5,8:13:30.07:398,30,0	1/1:4,18:22:30.10:437,30,0	1/1:9,18:27:29.89:436,30,0	1/1:3,20:23:27.05:369,27,0	1/1:7,8:15:12.04:175,12,0	1/1:8,8:16:20.75:169,21,0	1/1:3,12:15:11.96:128,12,0	1/1:8,27:35:33.11:481,33,0	0/1:14,0:14:14.25:50,0,14	0/0:6,0:13:0.47:0,0,2	0/1:38,0:39:99:105,0,249	1/1:8,10:17:9.03:131,9,0	1/1:17,5:22:26.61:285,27,0	1/1:5,22:27:39.13:562,39,0	1/1:3,5:8:18.05:243,18,0
chr10	60503827	.	G	GC	1289.20	PASS	AB=0.963;AC=28;AF=0.500;AN=56;BaseQRankSum=10.123;DP=548;FS=7.848;HRun=0;HaplotypeScore=115.9345;InbreedingCoeff=-0.2982;MQ=58.20;MQ0=11;MQRankSum=4.010;QD=2.89;ReadPosRankSum=10.266;VQSLOD=0.4444;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:31,0:30:23.79:105,24,0	0/1:12,0:12:14.02:14,0,14	0/0:30,1:18:29.07:0,29,585	0/0:42,0:22:63.12:0,63,824	1/1:12,0:12:5.96:35,6,0	0/1:15,1:16:22.49:22,0,65	0/1:16,5:21:24.13:24,0,111	0/0:9,0:9:24.08:0,24,336	1/1:21,0:21:29.41:104,29,0	0/1:16,0:16:16.89:17,0,92	0/1:10,0:10:8.72:9,0,26	0/1:19,0:19:11.04:54,0,11	1/1:22,0:22:10.64:70,11,0	1/1:13,0:13:0.55:53,1,0	0/1:21,0:21:3.03:80,0,3	0/1:23,0:23:53.18:53,0,70	0/1:23,0:23:27.41:43,0,27	0/1:10,0:10:10.26:10,0,65	0/1:16,0:15:19.65:20,0,176	0/1:16,0:16:1.62:2,0,45	0/1:39,0:38:49.18:138,0,49	0/1:13,1:14:36.71:37,0,41	0/0:8,0:8:1.55:0,2,4	0/1:18,19:36:56.67:367,0,57	0/1:15,0:14:23.44:46,0,23	0/1:13,0:14:68.67:73,0,69	0/1:25,0:25:22.23:74,0,22	0/0:12,0:12:5.54:0,6,171
chr10	60503828	.	T	TGC	779.94	PASS	AB=0.834;AC=4;AF=0.071;AN=56;BaseQRankSum=0.388;DP=537;FS=3.179;HRun=0;HaplotypeScore=126.3677;InbreedingCoeff=0.0093;MQ=59.34;MQ0=11;MQRankSum=0.975;QD=8.96;ReadPosRankSum=2.575;VQSLOD=3.5767;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:26.59:0,27,174	0/0:12,0:12:20.83:0,21,153	0/0:31,0:18:45.95:0,46,651	0/0:41,0:22:63.15:0,63,896	0/0:9,0:9:8.86:0,9,57	0/1:16,1:17:63.43:83,0,63	0/1:16,5:21:97.25:118,0,97	0/0:9,0:9:24.08:0,24,392	0/0:21,0:21:35.94:0,36,233	0/0:15,0:15:35.78:0,36,247	0/0:10,0:10:8.92:0,9,88	0/0:19,0:19:38.47:0,38,277	0/0:22,0:22:38.53:0,39,259	0/0:13,0:13:38.49:0,38,256	0/0:20,0:20:35.98:0,36,261	0/0:23,0:23:41.52:0,42,336	0/0:23,0:23:29.65:0,30,226	0/0:10,0:10:17.87:0,18,176	0/0:15,0:14:39.71:0,40,362	0/0:16,0:16:17.42:0,17,157	0/0:39,0:38:59.28:0,59,456	0/1:11,1:12:52.17:58,0,52	0/0:8,0:8:0.47:0,0,2	0/1:18,19:36:79.30:629,0,79	0/0:15,0:14:17.78:0,18,144	0/0:13,0:13:38.16:0,38,300	0/0:26,0:26:47.20:0,47,353	0/0:11,0:11:32.82:0,33,353
chr10	60505466	.	C	CA	16328.42	PASS	AB=0.583;AC=51;AF=0.911;AN=56;BaseQRankSum=1.450;DP=569;FS=7.942;HRun=6;HaplotypeScore=144.1024;InbreedingCoeff=0.6771;MQ=64.29;MQ0=0;MQRankSum=-4.503;QD=30.29;ReadPosRankSum=3.866;VQSLOD=2.9945;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,16:19:39.04:455,39,0	1/1:1,10:11:24.03:284,24,0	0/0:18,0:16:39.04:0,39,378	0/0:12,0:8:1.08:0,1,105	1/1:3,25:28:66.21:830,66,0	1/1:2,22:24:63.13:759,63,0	1/1:3,16:19:39.08:473,39,0	1/1:3,19:22:63.15:761,63,0	1/1:1,24:25:69.22:868,69,0	1/1:4,29:33:90.25:1112,90,0	1/1:7,30:37:78.13:929,78,0	1/1:0,26:26:69.22:868,69,0	1/1:2,10:12:33.06:397,33,0	1/1:1,17:18:51.04:589,51,0	1/1:0,13:13:33.04:381,33,0	1/1:0,17:17:45.11:549,45,0	0/1:4,10:14:0.25:309,0,0	1/1:3,11:14:2.53:344,3,0	1/1:4,17:21:57.13:685,57,0	1/1:2,25:27:66.13:795,66,0	1/1:0,9:9:27.09:340,27,0	1/1:2,19:21:51.16:642,51,0	1/1:4,18:22:53.87:636,54,0	1/1:2,13:15:27.09:340,27,0	1/1:2,18:20:54.13:661,54,0	1/1:2,23:25:66.19:815,66,0	1/1:5,29:33:87.28:1094,87,0	1/1:0,13:13:33.11:415,33,0
chr10	60505536	.	TA	T	15742.13	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=4.347;DP=472;FS=0.635;HRun=2;HaplotypeScore=124.1024;InbreedingCoeff=0.9528;MQ=54.11;MQ0=1;MQRankSum=-7.627;QD=36.36;ReadPosRankSum=4.503;VQSLOD=4.3657;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,8:8:23.99:289,24,0	1/1:0,13:13:39.13:505,39,0	0/0:22,0:22:59.12:0,59,833	0/0:17,0:16:41.72:0,42,557	1/1:1,23:24:69.16:858,69,0	1/1:0,20:20:60.20:777,60,0	1/1:3,9:12:33.10:414,33,0	1/1:3,18:21:37.27:740,37,0	1/1:1,20:21:63.12:780,63,0	1/1:1,19:20:60.19:768,60,0	1/1:0,20:20:51.17:659,51,0	1/1:2,14:16:42.12:530,42,0	1/1:1,9:10:30.08:372,30,0	1/1:2,13:15:42.07:522,42,0	1/1:0,17:17:51.17:660,51,0	1/1:1,20:21:63.20:803,63,0	1/1:0,4:4:12.04:155,12,0	1/1:0,12:12:36.12:467,36,0	1/1:2,11:13:36.11:457,36,0	1/1:0,25:25:75.14:931,75,0	1/1:1,2:3:9.02:102,9,0	1/1:1,17:18:54.18:699,54,0	1/1:2,27:29:81.25:1029,81,0	1/1:2,9:10:27.04:329,27,0	1/1:0,22:22:66.17:835,66,0	1/1:3,18:20:51.48:682,51,0	1/1:1,28:29:84.23:1067,84,0	1/1:0,8:8:24.08:311,24,0
chr10	60505546	.	T	TA	12691.42	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=0.670;DP=500;FS=7.003;HRun=8;HaplotypeScore=131.0487;InbreedingCoeff=0.8959;MQ=46.38;MQ0=1;MQRankSum=-5.452;QD=27.12;ReadPosRankSum=2.367;VQSLOD=3.4215;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,7:9:24.03:262,24,0	1/1:1,12:13:36.11:413,36,0	0/0:18,0:18:27.13:0,27,322	0/0:14,0:12:23.94:0,24,206	1/1:7,21:28:48.10:536,48,0	1/1:4,17:21:51.15:585,51,0	1/1:3,9:12:2.62:281,3,0	1/1:8,17:25:54.15:613,54,0	1/1:5,15:20:48.14:550,48,0	1/1:7,18:25:63.18:713,63,0	1/1:10,17:27:32.68:602,33,0	1/1:5,10:15:36.08:396,36,0	1/1:1,9:10:27.08:311,27,0	1/1:8,9:17:36.05:388,36,0	1/1:4,15:19:45.13:519,45,0	1/1:4,16:20:51.11:573,51,0	1/1:1,6:7:18.05:208,18,0	1/1:1,10:11:33.06:366,33,0	1/1:3,9:12:27.08:310,27,0	1/1:5,23:28:72.20:822,72,0	1/1:0,6:6:15.04:170,15,0	1/1:4,16:20:48.14:553,48,0	1/1:5,20:25:63.14:703,63,0	1/1:1,11:11:23.99:247,24,0	1/1:3,23:26:75.17:838,75,0	1/1:6,16:21:51.12:568,51,0	1/1:6,24:29:78.22:890,78,0	1/1:0,8:8:24.07:274,24,0
chr10	60507338	.	G	GA	16398.62	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-6.856;DP=563;FS=2.748;HRun=6;HaplotypeScore=49.5943;InbreedingCoeff=0.9961;MQ=60.01;MQ0=0;MQRankSum=-1.990;QD=31.18;ReadPosRankSum=4.910;VQSLOD=5.0723;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,20:23:54.17:679,54,0	1/1:0,14:14:42.13:528,42,0	0/0:23,0:20:39.07:0,39,391	0/0:14,0:13:30.06:0,30,305	1/1:3,30:33:81.25:1019,81,0	1/1:1,21:22:57.18:717,57,0	1/1:1,15:15:38.04:489,38,0	1/1:3,20:23:60.16:727,60,0	1/1:1,20:21:54.17:679,54,0	1/1:2,27:29:81.26:1019,81,0	1/1:2,13:15:27.09:340,27,0	1/1:4,9:13:27.09:340,27,0	1/1:2,14:16:42.13:521,42,0	1/1:2,15:17:45.14:566,45,0	1/1:3,14:17:42.13:528,42,0	1/1:0,18:18:45.14:566,45,0	1/1:2,11:13:33.10:410,33,0	1/1:1,19:20:31.56:581,32,0	1/1:1,13:14:39.11:477,39,0	1/1:2,37:39:99:1356,108,0	1/1:4,8:12:24.08:302,24,0	1/1:1,12:13:30.09:373,30,0	1/1:1,29:30:81.26:1019,81,0	1/1:2,13:15:27.09:340,27,0	1/1:3,17:20:48.15:604,48,0	1/1:4,31:35:90.29:1130,90,0	1/1:4,23:28:57.18:712,57,0	1/1:0,10:10:30.10:377,30,0
chr10	60507530	.	T	TC	16599.50	PASS	AB=0.556;AC=51;AF=0.911;AN=56;BaseQRankSum=-1.052;DP=460;FS=5.176;HRun=0;HaplotypeScore=83.9447;InbreedingCoeff=0.7693;MQ=62.40;MQ0=3;MQRankSum=-3.172;QD=41.81;ReadPosRankSum=4.367;VQSLOD=5.4271;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,19:20:48.16:750,48,0	0/1:1,4:5:19.66:176,0,20	0/0:28,0:19:38.11:0,38,584	0/0:34,0:25:53.08:0,53,821	1/1:0,20:20:54.18:861,54,0	1/1:0,26:26:78.27:1245,78,0	1/1:0,15:15:45.15:718,45,0	1/1:2,16:17:45.15:705,45,0	1/1:1,9:10:24.08:384,24,0	1/1:0,21:21:63.20:971,63,0	1/1:0,19:19:48.16:753,48,0	1/1:0,4:4:12.04:192,12,0	1/1:0,13:13:39.13:623,39,0	1/1:0,12:12:33.11:527,33,0	1/1:0,16:15:39.13:605,39,0	1/1:1,13:13:33.11:528,33,0	1/1:1,13:14:36.08:548,36,0	1/1:0,10:10:30.10:479,30,0	1/1:0,24:23:66.23:1053,66,0	1/1:1,27:28:63.21:975,63,0	1/1:2,9:11:24.08:383,24,0	1/1:0,15:15:39.13:622,39,0	1/1:0,13:13:33.11:525,33,0	1/1:0,13:13:36.12:572,36,0	1/1:0,13:13:30.10:479,30,0	1/1:0,16:16:48.16:767,48,0	1/1:1,17:18:48.16:737,48,0	1/1:0,9:9:27.09:420,27,0
chr10	60509622	.	A	AT	13450.26	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=2.014;DP=525;FS=10.807;HRun=8;HaplotypeScore=132.0999;InbreedingCoeff=0.9220;MQ=72.40;MQ0=0;MQRankSum=-3.553;QD=27.34;ReadPosRankSum=5.949;VQSLOD=3.2801;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,18:25:59.42:649,59,0	1/1:1,5:6:12.03:137,12,0	0/0:19,0:17:35.50:0,36,295	0/0:14,0:14:22.98:0,23,239	1/1:5,30:35:32.34:852,32,0	1/1:4,19:23:54.16:623,54,0	1/1:1,7:8:18.05:208,18,0	1/1:7,19:26:57.13:628,57,0	1/1:2,10:12:30.09:342,30,0	1/1:4,31:35:90.26:995,90,0	1/1:3,29:31:81.13:882,81,0	1/1:2,10:12:30.09:342,30,0	1/1:4,13:17:43.37:482,43,0	1/1:1,16:17:45.13:513,45,0	1/1:1,13:14:27.08:307,27,0	1/1:1,12:13:39.11:443,39,0	1/1:6,11:17:30.08:340,30,0	1/1:4,9:13:33.09:377,33,0	1/1:0,13:13:39.11:445,39,0	1/1:8,22:30:62.08:704,62,0	1/1:1,9:10:24.07:273,24,0	1/1:3,27:31:84.25:967,84,0	1/1:3,26:29:72.69:831,73,0	1/1:0,6:6:18.05:208,18,0	1/1:3,12:15:23.87:300,24,0	1/1:1,19:20:60.17:683,60,0	1/1:1,27:28:73.49:851,73,0	1/1:2,3:5:6.02:68,6,0
chr10	60509805	.	G	GGT	24718.79	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-1.161;DP=567;FS=1.362;HRun=0;HaplotypeScore=101.0002;InbreedingCoeff=0.9055;MQ=60.03;MQ0=2;MQRankSum=-4.530;QD=47.26;ReadPosRankSum=5.209;VQSLOD=5.8297;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,17:22:51.15:883,51,0	1/1:0,7:7:21.07:377,21,0	0/0:22,0:22:54.15:0,54,720	0/0:22,0:20:14.55:0,15,631	1/1:3,24:27:72.25:1294,72,0	1/1:0,22:22:66.23:1187,66,0	1/1:1,14:15:36.12:648,36,0	1/1:9,20:29:66.22:1153,66,0	1/1:2,13:15:42.14:754,42,0	1/1:8,26:34:96.28:1626,96,0	1/1:5,16:21:57.20:997,57,0	1/1:2,14:16:48.16:841,48,0	1/1:1,17:19:51.17:908,51,0	1/1:1,19:20:60.21:1075,60,0	1/1:0,11:11:33.11:593,33,0	1/1:2,16:18:54.19:971,54,0	1/1:3,22:25:63.13:1067,63,0	1/1:7,10:18:48.14:800,48,0	1/1:5,14:19:48.14:834,48,0	1/1:3,21:24:69.15:1170,69,0	1/1:2,24:26:72.25:1286,72,0	1/1:3,20:23:60.21:1078,60,0	1/1:4,20:23:63.19:1062,63,0	1/1:4,13:16:39.13:692,39,0	1/1:1,16:17:51.17:916,51,0	1/1:3,21:24:63.22:1133,63,0	1/1:5,23:28:75.24:1320,75,0	1/1:0,1:1:3.01:54,3,0
chr10	60509874	.	A	AT	15910.38	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-2.770;DP=578;FS=4.211;HRun=7;HaplotypeScore=106.8460;InbreedingCoeff=0.9637;MQ=60.75;MQ0=0;MQRankSum=-3.857;QD=28.98;ReadPosRankSum=3.847;VQSLOD=4.3685;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,15:17:42.13:507,42,0	1/1:1,5:6:12.04:145,12,0	0/0:14,0:14:32.99:0,33,300	0/0:15,0:14:22.12:0,22,196	1/1:1,26:27:66.20:797,66,0	1/1:2,24:26:66.16:781,66,0	1/1:0,17:17:48.15:580,48,0	1/1:3,28:31:84.24:1001,84,0	1/1:0,16:16:39.12:471,39,0	1/1:5,28:33:81.24:970,81,0	1/1:3,37:40:99:1176,99,0	1/1:0,16:16:39.12:471,39,0	1/1:3,10:13:33.10:399,33,0	1/1:3,12:16:48.09:549,48,0	1/1:1,15:16:42.12:499,42,0	1/1:3,17:20:45.14:541,45,0	1/1:6,13:19:39.11:459,39,0	1/1:3,11:14:30.51:394,31,0	1/1:3,15:18:19.17:514,19,0	1/1:3,24:27:63.06:702,63,0	1/1:3,22:25:48.15:580,48,0	1/1:6,23:29:60.14:708,60,0	1/1:2,33:35:87.18:1034,87,0	1/1:3,15:18:39.10:471,39,0	1/1:1,13:14:33.10:399,33,0	1/1:2,26:28:72.19:854,72,0	1/1:1,23:24:63.66:762,64,0	1/1:0,4:4:12.04:145,12,0
chr10	60511255	.	CT	C	6424.80	PASS	AC=50;AF=0.926;AN=54;BaseQRankSum=7.910;DP=293;FS=58.184;HRun=2;HaplotypeScore=90.2948;InbreedingCoeff=0.7724;MQ=56.90;MQ0=4;MQRankSum=-8.084;QD=25.39;ReadPosRankSum=4.597;VQSLOD=0.8234;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,11:10:21.91:225,22,0	1/1:0,6:6:18.05:213,18,0	0/0:21,0:15:45.12:0,45,641	0/0:19,0:16:46.97:0,47,673	1/1:1,13:13:32.53:346,33,0	1/1:2,9:11:25.63:286,26,0	1/1:3,3:6:9.03:105,9,0	1/1:6,20:26:57.15:698,57,0	1/1:0,11:11:33.10:386,33,0	1/1:1,18:17:45.13:545,45,0	1/1:1,6:7:9.02:101,9,0	1/1:0,7:7:18.05:214,18,0	1/1:1,8:9:24.06:270,24,0	1/1:1,8:9:24.07:282,24,0	1/1:0,4:4:12.04:139,12,0	1/1:2,5:7:15.04:177,15,0	1/1:0,8:8:18.05:209,18,0	1/1:3,4:7:12.04:147,12,0	1/1:2,7:8:23.99:265,24,0	1/1:0,11:11:24.12:251,24,0	1/1:5,2:7:3.01:35,3,0	1/1:1,9:9:15.04:171,15,0	1/1:0,6:6:15.04:171,15,0	1/1:2,3:5:6.02:68,6,0	1/1:2,9:11:27.08:314,27,0	1/1:2,13:14:36.11:442,36,0	1/1:4,13:16:30.09:366,30,0	./.
chr10	60511260	.	ATT	A	8707.51	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=7.531;DP=267;FS=54.041;HRun=2;HaplotypeScore=81.8492;InbreedingCoeff=0.6562;MQ=63.01;MQ0=2;MQRankSum=-8.290;QD=37.69;ReadPosRankSum=3.232;VQSLOD=1.5305;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,10:10:20.95:262,21,0	1/1:0,5:5:15.05:224,15,0	0/0:18,1:16:1.73:0,2,868	0/0:17,0:16:43.38:0,43,909	1/1:0,15:14:36:476,36,0	1/1:1,9:10:30.05:426,30,0	1/1:0,3:3:9.03:135,9,0	1/1:0,24:24:69.22:1036,69,0	1/1:0,11:11:33.11:495,33,0	1/1:1,16:15:45.15:701,45,0	1/1:0,6:6:9.03:131,9,0	1/1:1,6:7:18.06:270,18,0	1/1:2,7:9:24.08:349,24,0	1/1:0,8:8:24.08:362,24,0	1/1:0,4:4:12.04:179,12,0	1/1:0,5:5:15.05:227,15,0	1/1:1,8:9:21.07:306,21,0	1/1:0,4:4:12.04:186,12,0	1/1:0,7:6:18.06:285,18,0	1/1:2,11:13:29.98:394,30,0	1/1:2,2:4:3.01:45,3,0	1/1:0,9:8:15.05:221,15,0	1/1:2,6:8:18.06:254,18,0	1/1:0,3:3:6.02:88,6,0	1/1:1,9:10:30.10:440,30,0	1/1:0,13:12:36.12:562,36,0	1/1:1,10:10:30.10:462,30,0	1/1:5,0:5:15.03:194,15,0
chr10	60511426	.	G	GTT	2055.53	PASS	AB=1.000;AC=47;AF=0.979;AN=48;DP=140;FS=0.000;HRun=1;HaplotypeScore=185.0962;InbreedingCoeff=0.0544;MQ=30.77;MQ0=0;QD=14.79;VQSLOD=0.4320;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,0:5:6.01:67,6,0	1/1:5,0:5:6.02:70,6,0	./.	./.	1/1:16,0:16:26.39:255,26,0	1/1:3,0:3:3.01:31,3,0	1/1:3,0:3:9.01:87,9,0	1/1:4,0:4:12.03:140,12,0	1/1:4,0:4:3.01:41,3,0	1/1:5,0:5:12.02:124,12,0	1/1:17,0:17:18.03:183,18,0	./.	0/1:2,0:2:0:0,0,0	1/1:2,0:2:3:29,3,0	1/1:1,0:1:3.01:34,3,0	1/1:4,0:4:12.02:139,12,0	1/1:8,0:8:14.97:149,15,0	1/1:1,0:1:3.01:38,3,0	1/1:4,0:4:3:28,3,0	1/1:23,0:23:36.04:340,36,0	1/1:2,0:2:3:28,3,0	1/1:4,0:4:1.82:5,2,0	1/1:8,6:14:15.02:151,15,0	1/1:3,0:3:3:28,3,0	1/1:3,0:3:6.01:69,6,0	1/1:1,0:1:3.01:30,3,0	1/1:5,0:5:6:65,6,0	./.
chr10	60511559	.	TA	T	2080.73	PASS	AB=0.773;AC=20;AF=0.357;AN=56;BaseQRankSum=13.721;DP=401;FS=11.166;HRun=1;HaplotypeScore=182.0455;InbreedingCoeff=-0.5915;MQ=33.54;MQ0=4;MQRankSum=-2.995;QD=6.14;ReadPosRankSum=6.060;VQSLOD=-0.4275;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:39.13:0,39,614	0/1:9,2:11:39.30:39,0,397	0/0:6,0:2:5.38:0,5,56	0/0:4,0:2:6.02:0,6,96	0/1:18,10:28:99:143,0,425	0/1:11,4:15:99:104,0,435	0/1:1,6:7:26.90:190,0,27	0/1:9,6:14:99:146,0,341	0/1:14,2:16:24.45:24,0,620	0/1:9,6:15:99:145,0,385	0/1:12,10:22:99:101,0,476	0/1:9,1:10:12.15:12,0,310	0/1:6,2:8:55.26:55,0,173	0/1:11,4:15:79.67:80,0,479	0/1:12,3:15:67.80:68,0,484	0/1:10,2:12:36.47:36,0,442	0/0:10,0:10:24.08:0,24,382	0/0:11,0:11:30.10:0,30,468	0/0:10,0:8:21.06:0,21,314	0/1:17,12:29:99:356,0,675	0/0:3,0:3:9.03:0,9,143	0/1:11,5:16:99:129,0,477	0/1:18,4:22:84.96:85,0,702	0/0:4,1:5:3.01:0,3,48	0/1:20,7:27:99:176,0,849	0/1:18,8:26:99:175,0,740	0/1:20,6:26:99:147,0,766	0/1:2,2:4:25.18:25,0,84
chr10	60511620	.	CG	C	16002.48	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=2.903;DP=465;FS=2.474;HRun=1;HaplotypeScore=124.9169;InbreedingCoeff=0.9265;MQ=70.92;MQ0=0;MQRankSum=-8.877;QD=37.04;ReadPosRankSum=4.913;VQSLOD=4.4619;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,26:26:72.23:934,72,0	1/1:0,10:10:27.09:347,27,0	0/0:12,1:13:5.77:0,6,541	0/0:20,0:20:53.53:0,54,754	1/1:0,21:21:60.20:778,60,0	1/1:0,21:21:63.20:817,63,0	1/1:0,10:10:30.10:389,30,0	1/1:2,23:25:72.22:921,72,0	1/1:0,12:12:36.12:467,36,0	1/1:0,23:23:69.22:895,69,0	1/1:0,17:17:42.14:545,42,0	1/1:0,8:8:24.08:311,24,0	1/1:0,15:15:45.15:582,45,0	1/1:0,15:15:45.15:583,45,0	1/1:0,18:18:51.08:623,51,0	1/1:0,13:13:39.13:506,39,0	1/1:0,16:16:48.12:605,48,0	1/1:0,20:20:54.18:701,54,0	1/1:1,12:13:36.55:450,37,0	1/1:0,21:21:60.20:778,60,0	1/1:0,6:6:18.06:233,18,0	1/1:1,20:21:59:744,59,0	1/1:0,21:21:63.20:818,63,0	1/1:0,11:11:33.06:409,33,0	1/1:0,16:16:45.15:584,45,0	1/1:0,21:21:60.19:776,60,0	1/1:0,27:27:78.25:1012,78,0	1/1:0,5:5:15.05:195,15,0
chr10	60512338	.	C	CA	693.55	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=-3.912;DP=635;FS=0.000;HRun=6;HaplotypeScore=85.8739;InbreedingCoeff=0.7633;MQ=59.90;MQ0=4;MQRankSum=-1.463;QD=20.40;ReadPosRankSum=-4.026;VQSLOD=2.1012;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:69.15:0,69,703	0/0:7,0:7:21.05:0,21,214	0/0:30,0:24:63.12:0,63,628	0/0:28,0:23:32.93:0,33,382	0/0:31,0:31:84.17:0,84,850	0/0:29,0:29:81.17:0,81,820	0/0:16,0:16:45.09:0,45,452	1/1:8,21:26:63.20:788,63,0	0/0:23,0:23:66.15:0,66,673	0/0:37,0:37:99:0,102,1026	0/0:27,0:27:81.17:0,81,819	0/0:14,0:14:42.10:0,42,428	0/0:26,0:26:69.14:0,69,697	0/0:21,0:21:57.13:0,57,582	0/0:22,0:22:63.13:0,63,636	0/0:20,0:20:60.14:0,60,612	0/0:16,0:16:45.10:0,45,459	0/0:13,0:13:33.91:0,34,322	0/0:21,0:20:51.10:0,51,519	0/0:24,0:24:69.15:0,69,704	0/0:29,0:29:81.15:0,81,817	0/0:38,0:38:99:0,108,1094	0/0:21,0:21:63.14:0,63,643	0/0:14,0:14:36.08:0,36,367	0/0:20,0:20:60.13:0,60,611	0/0:25,0:25:66.14:0,66,673	0/0:23,0:22:66.15:0,66,673	0/1:5,0:5:1.33:1,0,25
chr10	60512855	.	GA	G	7899.58	PASS	AB=0.556;AC=51;AF=0.981;AN=52;BaseQRankSum=-1.349;DP=267;FS=12.951;HRun=3;HaplotypeScore=56.6320;InbreedingCoeff=-0.0251;MQ=30.91;MQ0=0;MQRankSum=1.684;QD=30.04;ReadPosRankSum=1.509;VQSLOD=3.2842;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,16:17:48.15:588,48,0	1/1:0,6:6:18.06:222,18,0	0/1:1,4:4:30.25:31,0,30	./.	1/1:2,8:10:15.05:183,15,0	1/1:0,6:6:18.06:222,18,0	1/1:1,10:11:30.09:369,30,0	1/1:1,13:14:33.10:408,33,0	1/1:0,10:10:30.09:369,30,0	1/1:1,9:10:30.09:360,30,0	1/1:0,12:12:30.09:366,30,0	1/1:1,8:9:24.07:295,24,0	1/1:1,6:7:18.06:221,18,0	1/1:0,8:8:24.08:294,24,0	1/1:3,8:11:27.07:319,27,0	1/1:2,8:10:21.06:256,21,0	1/1:0,6:6:15.05:184,15,0	1/1:0,7:7:18.06:222,18,0	1/1:0,6:6:15.05:185,15,0	1/1:0,9:9:21.07:257,21,0	1/1:0,15:15:36.11:440,36,0	1/1:0,15:15:39.09:475,39,0	1/1:1,6:7:15.05:184,15,0	1/1:0,8:8:9.01:110,9,0	1/1:3,15:18:48.13:576,48,0	1/1:3,13:16:42.12:506,42,0	1/1:1,9:10:21.07:258,21,0	./.
chr10	60513427	.	G	GC	14692.39	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=3.697;DP=416;FS=23.731;HRun=0;HaplotypeScore=70.1280;InbreedingCoeff=0.9458;MQ=68.43;MQ0=5;MQRankSum=-7.140;QD=39.92;ReadPosRankSum=6.458;VQSLOD=2.8270;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,32:32:87.30:1386,87,0	1/1:0,10:9:15.05:239,15,0	0/0:20,0:18:51.08:0,51,629	0/0:28,0:26:53.77:0,54,793	1/1:2,22:24:57.13:866,57,0	1/1:0,12:12:36.12:561,36,0	1/1:0,11:11:24.08:382,24,0	1/1:0,13:13:35.86:530,36,0	1/1:1,13:13:36.12:564,36,0	1/1:1,19:19:57.19:910,57,0	1/1:0,14:14:33.11:524,33,0	1/1:0,8:8:21.07:334,21,0	1/1:0,15:15:45.15:716,45,0	1/1:2,19:20:48.16:763,48,0	1/1:1,8:8:21.07:334,21,0	1/1:0,11:11:27.09:429,27,0	1/1:1,16:17:48.16:764,48,0	1/1:0,18:18:42.07:640,42,0	1/1:0,10:10:30.10:479,30,0	1/1:0,12:12:27.09:431,27,0	1/1:1,25:25:63.15:977,63,0	1/1:1,10:11:21.07:334,21,0	1/1:1,5:5:15.05:239,15,0	1/1:0,18:18:48.16:764,48,0	1/1:0,9:9:27.09:427,27,0	1/1:0,12:12:36.12:574,36,0	1/1:0,10:10:24.08:381,24,0	1/1:0,4:4:9.03:144,9,0
chr10	60514325	.	T	TA	760.39	PASS	AC=16;AF=1.000;AN=16;DP=103;FS=0.000;HRun=7;HaplotypeScore=17.1294;MQ=22.43;MQ0=36;QD=15.52;VQSLOD=1.4769;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	1/1:1,7:7:6.02:72,6,0	./.	./.	./.	./.	1/1:1,7:8:21.06:254,21,0	1/1:2,6:8:9.03:109,9,0	./.	./.	./.	./.	1/1:1,4:4:6.02:72,6,0	./.	./.	./.	./.	./.	1/1:0,7:7:15.05:181,15,0	1/1:2,2:3:3.01:36,3,0	./.	1/1:2,3:5:3.01:35,3,0	1/1:2,2:4:6.02:72,6,0	./.	./.
chr10	60517471	.	TCC	T	1623.51	PASS	AB=0.821;AC=31;AF=0.969;AN=32;BaseQRankSum=1.054;DP=449;FS=19.777;HRun=4;HaplotypeScore=105.3707;InbreedingCoeff=-0.0705;MQ=14.13;MQ0=295;MQRankSum=-1.339;QD=5.86;ReadPosRankSum=0.411;VQSLOD=-0.6056;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	1/1:4,0:1:2.74:12,3,0	./.	./.	1/1:18,3:14:31.99:287,32,0	./.	./.	./.	1/1:17,1:1:3.01:44,3,0	1/1:15,0:6:17.24:92,17,0	1/1:22,4:16:40.40:232,40,0	1/1:11,3:2:5.75:56,6,0	1/1:17,1:3:5.42:23,5,0	1/1:11,4:1:3.01:44,3,0	1/1:10,1:2:5.36:21,5,0	1/1:9,0:2:5.54:24,6,0	./.	./.	./.	1/1:38,2:19:48.89:234,49,0	./.	1/1:11,2:6:16.49:129,16,0	1/1:18,1:8:21.33:116,21,0	./.	1/1:14,2:8:22.42:158,22,0	1/1:14,1:3:8.56:43,9,0	0/1:18,5:9:30.42:194,0,30	./.
chr10	60517473	.	C	CAT	3565.75	PASS	AB=0.710;AC=31;AF=0.969;AN=32;BaseQRankSum=1.089;DP=432;FS=19.868;HRun=0;HaplotypeScore=93.1809;InbreedingCoeff=-0.0970;MQ=14.28;MQ0=285;MQRankSum=1.232;QD=12.92;ReadPosRankSum=0.268;VQSLOD=1.8523;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	1/1:3,1:1:3.01:41,3,0	./.	./.	1/1:10,10:13:36.07:427,36,0	./.	./.	./.	1/1:17,1:1:2.99:23,3,0	1/1:7,8:6:18.06:257,18,0	1/1:13,14:16:48.12:605,48,0	1/1:11,3:2:6:65,6,0	1/1:13,5:3:6.02:82,6,0	1/1:13,1:1:2.99:23,3,0	1/1:8,2:2:6.02:80,6,0	1/1:7,2:2:6.02:82,6,0	./.	./.	./.	1/1:23,17:18:54.16:715,54,0	./.	1/1:9,4:6:18.03:210,18,0	1/1:13,8:8:24.06:307,24,0	./.	1/1:9,7:8:24.05:294,24,0	1/1:9,6:3:9.03:127,9,0	0/1:13,9:9:21.91:226,0,22	./.
chr10	60517474	.	C	CAATG	5761.08	PASS	AB=0.779;AC=26;AF=0.813;AN=32;BaseQRankSum=3.966;DP=454;FS=7.587;HRun=0;HaplotypeScore=100.8202;InbreedingCoeff=0.2522;MQ=15.07;MQ0=285;MQRankSum=-1.002;QD=21.66;ReadPosRankSum=4.924;VQSLOD=4.0459;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	1/1:4,1:2:6.02:121,6,0	./.	./.	1/1:16,10:18:22.33:795,22,0	./.	./.	./.	0/0:17,1:1:2.22:0,2,7	1/1:8,8:7:18.06:411,18,0	1/1:15,14:18:30.44:893,30,0	0/1:11,3:2:2.10:62,0,2	1/1:13,5:3:6.02:133,6,0	0/0:14,1:1:2.22:0,2,7	1/1:8,2:2:6.02:131,6,0	1/1:7,2:2:6.02:133,6,0	./.	./.	./.	1/1:26,17:21:52.13:1239,52,0	./.	1/1:11,4:7:3.41:308,3,0	1/1:14,8:9:18.99:514,19,0	./.	1/1:11,7:10:13.18:507,13,0	1/1:10,6:4:12.04:272,12,0	0/1:16,9:9:66.14:241,0,66	./.
chr10	60519097	.	G	GA	1177.55	PASS	AC=30;AF=0.882;AN=34;BaseQRankSum=-1.752;DP=97;FS=26.955;HRun=1;HaplotypeScore=22.7374;InbreedingCoeff=0.2005;MQ=33.66;MQ0=20;MQRankSum=-0.039;QD=24.03;ReadPosRankSum=0.584;VQSLOD=1.7876;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:21,0:1:2.04:0,2,6	0/0:11,0:1:2.99:0,3,24	./.	1/1:1,3:4:6.02:90,6,0	./.	1/1:1,5:5:15.05:225,15,0	1/1:2,4:6:15.05:216,15,0	1/1:0,2:2:6.02:90,6,0	1/1:0,1:1:3.01:45,3,0	1/1:0,2:2:3.01:45,3,0	1/1:1,1:2:3.01:45,3,0	1/1:1,4:5:3.01:45,3,0	1/1:1,2:3:3.01:45,3,0	1/1:1,2:1:3.01:45,3,0	1/1:2,0:1:2.97:20,3,0	./.	./.	1/1:0,6:4:12.01:156,12,0	./.	./.	1/1:0,2:2:3.01:45,3,0	./.	./.	1/1:2,2:4:9.01:113,9,0	1/1:0,1:1:3.01:45,3,0	./.
chr10	60519219	.	AC	A	960.44	PASS	AC=16;AF=0.800;AN=20;BaseQRankSum=2.544;DP=83;FS=0.000;HRun=1;HaplotypeScore=31.6063;InbreedingCoeff=0.6370;MQ=21.55;MQ0=23;MQRankSum=-0.016;QD=24.63;ReadPosRankSum=-1.607;VQSLOD=2.9274;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	1/1:0,1:1:3.01:42,3,0	./.	./.	1/1:0,11:9:20.98:249,21,0	./.	./.	./.	./.	1/1:1,7:7:18.02:229,18,0	1/1:1,3:3:8.99:104,9,0	./.	./.	./.	./.	./.	./.	./.	./.	1/1:0,10:8:21.04:272,21,0	./.	0/0:10,0:10:21.07:0,21,334	0/0:6,0:6:12.04:0,12,186	./.	./.	1/1:0,2:2:6.02:84,6,0	1/1:0,2:2:3.01:42,3,0	1/1:0,1:1:3.01:42,3,0
chr10	60519282	.	ACC	A	526.21	PASS	AC=14;AF=1.000;AN=14;DP=73;FS=0.000;HRun=3;HaplotypeScore=24.6439;MQ=20.73;MQ0=6;QD=13.16;VQSLOD=0.2661;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	1/1:0,1:1:3.01:46,3,0	./.	./.	./.	./.	./.	./.	./.	1/1:2,2:2:3.01:46,3,0	1/1:2,2:4:3.01:46,3,0	./.	./.	./.	./.	./.	./.	./.	./.	1/1:2,9:9:9.03:137,9,0	./.	1/1:1,8:7:3.01:46,3,0	./.	./.	1/1:0,10:10:15.05:229,15,0	1/1:0,1:1:3.01:46,3,0	./.	./.
chr10	60519369	.	A	AC	300.25	PASS	AC=8;AF=1.00;AN=8;DP=81;FS=0.000;HRun=4;HaplotypeScore=24.3850;MQ=13.10;MQ0=47;QD=18.77;VQSLOD=1.9393;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	1/1:1,3:3:9.03:123,9,0	./.	./.	./.	./.	./.	./.	./.	./.	1/1:1,4:4:12.04:163,12,0	./.	./.	1/1:0,2:2:3.01:41,3,0	./.	1/1:4,1:3:3.01:41,3,0	./.	./.	./.
chr10	60520476	.	A	AG	611.35	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-6.727;DP=510;FS=13.985;HRun=5;HaplotypeScore=65.1198;InbreedingCoeff=0.9783;MQ=74.04;MQ0=0;MQRankSum=1.559;QD=25.47;ReadPosRankSum=-3.146;VQSLOD=1.4042;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:57.13:0,57,605	0/0:8,0:8:24.06:0,24,258	0/0:27,0:27:69.16:0,69,729	0/0:27,0:27:67.08:0,67,692	0/0:36,0:36:99:0,102,1096	0/0:34,0:34:96.20:0,96,1008	0/0:14,0:14:33.08:0,33,355	1/1:5,19:24:57.15:706,57,0	0/0:25,0:25:69.17:0,69,742	0/0:22,0:22:63.15:0,63,670	0/0:20,0:20:57.13:0,57,605	0/0:11,0:11:30.08:0,30,322	0/0:19,0:19:51.13:0,51,548	0/0:13,0:13:36.09:0,36,387	0/0:18,0:18:51.13:0,51,548	0/0:14,0:14:36.09:0,36,387	0/0:19,0:19:48.12:0,48,516	0/0:8,0:8:24.04:0,24,249	0/0:11,0:11:30.08:0,30,322	0/0:19,0:19:54.14:0,54,580	0/0:20,0:20:60.15:0,60,645	0/0:14,0:14:36.09:0,36,387	0/0:15,0:15:39.10:0,39,419	0/0:5,0:5:15.04:0,15,161	0/0:10,0:10:30.07:0,30,322	0/0:21,0:21:63.15:0,63,671	0/0:21,0:21:51.12:0,51,547	0/0:14,0:14:42.11:0,42,451
chr10	60522472	.	GA	G	15877.43	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=7.366;DP=623;FS=3.464;HRun=5;HaplotypeScore=129.1232;InbreedingCoeff=0.9924;MQ=67.38;MQ0=0;MQRankSum=-5.508;QD=29.13;ReadPosRankSum=8.065;VQSLOD=2.6879;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:6,27:33:54.06:845,54,0	1/1:0,10:10:27.08:306,27,0	0/0:34,0:34:86.98:0,87,1160	0/0:18,0:17:48.10:0,48,619	1/1:4,18:22:54.15:612,54,0	1/1:3,22:25:68.49:727,68,0	1/1:1,13:14:33.09:374,33,0	0/0:26,0:26:78.24:0,78,1026	1/1:4,22:26:69.09:751,69,0	1/1:5,20:25:60.17:680,60,0	1/1:4,21:25:54.15:611,54,0	1/1:0,8:8:24.02:257,24,0	1/1:2,24:26:69.16:768,69,0	1/1:3,21:24:66.13:726,66,0	1/1:1,19:20:60.10:664,60,0	1/1:2,7:9:24.03:258,24,0	1/1:1,26:27:81.18:903,81,0	1/1:1,15:16:41.83:474,42,0	1/1:3,14:17:45.10:492,45,0	1/1:3,20:23:57.16:646,57,0	1/1:3,28:31:71.26:807,71,0	1/1:2,34:36:99:1179,105,0	1/1:2,17:19:51.13:567,51,0	1/1:3,23:26:62.76:693,63,0	1/1:1,20:21:60.17:680,60,0	1/1:5,19:24:60.16:672,60,0	1/1:2,31:33:93.18:1028,93,0	1/1:1,4:5:15:156,15,0
chr10	60522538	.	G	GCA	25548.87	PASS	AB=0.680;AC=51;AF=0.911;AN=56;BaseQRankSum=-3.226;DP=680;FS=5.475;HRun=0;HaplotypeScore=117.4462;InbreedingCoeff=0.7740;MQ=78.03;MQ0=1;MQRankSum=-8.082;QD=41.21;ReadPosRankSum=5.582;VQSLOD=6.1870;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,34:44:99:1757,105,0	1/1:1,5:6:15.05:255,15,0	0/0:32,0:31:81.10:0,81,991	0/0:27,0:26:34.26:0,34,624	1/1:2,15:17:45.15:763,45,0	1/1:3,23:26:69.22:1146,69,0	0/1:9,8:17:38.92:514,0,39	1/1:5,23:30:78.22:1246,78,0	1/1:6,27:33:87.28:1450,87,0	1/1:6,14:20:51.15:810,51,0	1/1:8,12:20:39.13:653,39,0	1/1:1,15:16:42.14:714,42,0	1/1:8,14:22:63.18:1009,63,0	1/1:5,22:27:75.16:1185,75,0	1/1:3,17:20:54.18:914,54,0	1/1:1,15:16:48.16:809,48,0	1/1:6,22:28:44.01:999,44,0	1/1:6,12:18:33.11:560,33,0	1/1:6,15:20:48.15:791,48,0	1/1:4,21:25:66.23:1112,66,0	1/1:6,45:51:99:2040,120,0	1/1:4,28:33:81.28:1368,81,0	1/1:2,12:15:41.97:665,42,0	1/1:11,20:32:63.21:1054,63,0	1/1:4,11:15:33.11:561,33,0	1/1:1,17:18:51.15:838,51,0	1/1:6,36:42:99:1927,116,0	1/1:0,7:8:24.08:406,24,0
chr10	60522546	.	A	ACC	12785.87	PASS	AB=0.992;AC=43;AF=0.768;AN=56;BaseQRankSum=4.244;DP=681;FS=0.393;HRun=2;HaplotypeScore=153.6508;InbreedingCoeff=0.1165;MQ=74.71;MQ0=1;MQRankSum=-4.542;QD=20.72;ReadPosRankSum=11.585;VQSLOD=1.1380;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:40,0:40:43.12:887,43,0	1/1:5,0:5:15.01:138,15,0	0/0:34,0:29:81.25:0,81,1151	0/0:30,0:28:24.22:0,24,885	1/1:15,0:15:45.03:416,45,0	1/1:26,0:26:43.94:601,44,0	0/1:15,0:15:49.22:242,0,49	0/1:28,1:29:5.98:487,0,6	1/1:31,1:32:86.89:829,87,0	0/1:22,0:23:48.86:342,0,49	1/1:17,0:17:44.98:418,45,0	1/1:16,0:16:20.08:369,20,0	1/1:22,1:23:37.88:566,38,0	0/1:31,0:31:8.03:530,0,8	1/1:20,0:20:10.15:439,10,0	1/1:16,0:16:47.98:434,48,0	0/1:29,0:29:54.30:498,0,54	1/1:16,0:16:11.08:275,11,0	1/1:18,0:17:44.66:364,45,0	1/1:25,0:25:44.09:592,44,0	0/1:53,0:53:25.55:937,0,26	1/1:29,0:29:80.99:729,81,0	0/1:20,0:20:0.85:353,0,1	0/1:32,0:32:38.87:535,0,39	1/1:12,1:13:11.08:289,11,0	0/1:20,0:20:22.89:360,0,23	1/1:44,0:44:33.91:957,34,0	1/1:10,0:10:7.04:197,7,0
chr10	60523072	.	G	GA	659.75	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-6.972;DP=456;FS=0.874;HRun=6;HaplotypeScore=61.9321;InbreedingCoeff=0.9696;MQ=61.92;MQ0=0;MQRankSum=0.240;QD=27.49;ReadPosRankSum=-3.028;VQSLOD=2.7447;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:84.19:0,84,855	0/0:8,0:8:24.05:0,24,244	0/0:13,0:12:30.04:0,30,291	0/0:9,0:8:19.92:0,20,144	0/0:42,0:42:99:0,120,1222	0/0:18,0:18:48.11:0,48,489	0/0:9,0:9:27.06:0,27,274	1/1:4,20:24:60.19:755,60,0	0/0:17,0:17:45.10:0,45,459	0/0:26,0:26:72.16:0,72,732	0/0:23,0:23:57.13:0,57,581	0/0:15,0:15:29.65:0,30,305	0/0:9,0:9:27.06:0,27,275	0/0:12,0:12:36.08:0,36,365	0/0:7,0:7:18.04:0,18,184	0/0:11,0:11:33.06:0,33,328	0/0:13,0:13:27.06:0,27,275	0/0:7,0:7:21.05:0,21,213	0/0:17,0:17:51.06:0,51,499	0/0:27,0:27:69.15:0,69,702	0/0:11,0:11:23.65:0,24,244	0/0:14,0:14:36.08:0,36,367	0/0:19,0:19:45.06:0,45,459	0/0:7,0:7:21.03:0,21,208	0/0:21,0:21:57.13:0,57,581	0/0:17,0:17:44.93:0,45,450	0/0:22,0:22:60.12:0,60,605	0/0:9,0:9:27.06:0,27,275
chr10	60523130	.	G	GACCAGGGATGAAGCTTAGAGTTTATG	2204.93	PASS	AB=0.625;AC=27;AF=0.964;AN=28;BaseQRankSum=-2.572;DP=35;FS=2.696;HRun=0;HaplotypeScore=38.1406;InbreedingCoeff=-0.1763;MQ=136.49;MQ0=0;MQRankSum=-2.105;QD=71.13;ReadPosRankSum=-0.702;VQSLOD=2.3119;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	1/1:1,0:2:6.02:176,6,0	1/1:1,1:4:2.01:628,2,0	0/1:2,0:5:13.15:276,0,13	1/1:4,0:5:15.04:496,15,0	./.	./.	1/1:2,0:2:6.01:69,6,0	1/1:3,0:3:9.02:102,9,0	1/1:0,0:1:3.01:99,3,0	1/1:2,0:2:6.02:147,6,0	./.	./.	1/1:1,0:1:3.01:76,3,0	./.	./.	./.	./.	./.	1/1:1,0:1:3:25,3,0	1/1:1,0:1:2.98:21,3,0	1/1:1,0:1:3.01:97,3,0	1/1:1,0:1:3:25,3,0	./.	./.	./.	1/1:2,0:2:5.99:49,6,0	./.
chr10	60523268	.	GGC	G	1249.33	PASS	AB=0.749;AC=35;AF=0.833;AN=42;BaseQRankSum=0.824;DP=241;FS=1.323;HRun=0;HaplotypeScore=92.2159;InbreedingCoeff=-0.0166;MQ=25.82;MQ0=36;MQRankSum=-0.492;QD=7.22;ReadPosRankSum=2.179;VQSLOD=3.3913;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,4:8:10.09:102,10,0	1/1:0,1:1:3.01:37,3,0	./.	./.	1/1:7,8:12:2.88:45,3,0	1/1:9,8:18:3.07:81,3,0	0/1:1,2:2:0:0,0,0	0/1:9,4:10:99:103,0,133	1/1:0,8:8:5.96:43,6,0	1/1:5,6:7:18.93:216,19,0	./.	1/1:4,6:9:11.24:94,11,0	1/1:1,6:7:14.95:141,15,0	./.	./.	1/1:5,6:10:5.59:61,6,0	0/1:3,2:5:10.43:32,0,10	1/1:1,1:2:5.81:49,6,0	0/1:11,0:6:6.94:7,0,79	1/1:8,6:14:5.77:67,6,0	0/0:12,0:8:0:0,0,0	./.	1/1:6,3:8:2.74:44,3,0	./.	0/1:3,6:9:0.72:13,0,1	1/1:5,1:5:11.99:133,12,0	1/1:5,1:6:3.01:38,3,0	1/1:0,1:1:3.01:39,3,0
chr10	60523273	.	AGAGG	A	152.75	PASS	AB=0.958;AC=26;AF=0.520;AN=50;BaseQRankSum=1.300;DP=287;FS=4.131;HRun=0;HaplotypeScore=105.8524;InbreedingCoeff=0.1765;MQ=26.17;MQ0=43;MQRankSum=-1.109;QD=0.88;ReadPosRankSum=2.528;VQSLOD=1.8572;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:12,0:8:0.72:2,0,1	1/1:2,0:1:2.99:24,3,0	1/1:19,0:3:3.79:18,4,0	0/0:26,0:3:9:0,9,115	1/1:16,0:13:2.73:21,3,0	1/1:13,4:17:3.42:48,3,0	0/1:2,2:2:0:0,0,0	0/0:20,0:17:29.34:0,29,241	1/1:9,0:9:0.77:3,1,0	0/1:11,0:7:23.85:34,0,24	./.	0/1:10,0:9:2.68:3,0,6	1/1:8,0:8:4.48:30,4,0	0/0:4,0:4:2.98:0,3,21	./.	0/0:13,0:12:2.72:0,3,11	0/0:7,0:7:7.10:0,7,31	1/1:2,0:2:1.51:16,2,0	0/1:13,0:6:12.51:13,0,74	1/1:15,0:14:3.45:23,3,0	0/0:12,0:8:0:0,0,0	./.	1/1:10,3:10:2.82:22,3,0	0/1:6,0:6:0:0,0,0	0/0:10,0:10:0.94:0,1,2	0/1:6,0:5:12.75:13,0,32	0/1:10,0:10:7.30:7,0,28	0/0:1,0:1:0.47:0,0,1
chr10	60523276	.	GGC	G	290.25	PASS	AB=0.943;AC=23;AF=0.460;AN=50;BaseQRankSum=2.920;DP=276;FS=1.166;HRun=0;HaplotypeScore=95.5533;InbreedingCoeff=-0.1081;MQ=25.89;MQ0=49;MQRankSum=0.005;QD=1.49;ReadPosRankSum=2.053;VQSLOD=1.5782;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:9,1:6:2.66:28,3,0	1/1:2,0:1:2.84:14,3,0	0/1:22,1:4:17.82:18,0,71	0/1:28,1:4:15.54:16,0,128	0/0:12,0:10:0.47:0,0,1	0/1:10,1:13:2.14:2,0,5	0/1:4,0:2:0:0,0,0	0/1:16,0:14:0.59:1,0,217	1/1:7,2:9:5.85:36,6,0	0/1:8,2:6:17:63,0,17	./.	0/1:9,2:10:8.34:48,0,8	0/1:8,1:9:6.98:7,0,10	0/0:4,0:4:2.99:0,3,24	./.	0/1:12,1:12:10.53:36,0,11	0/1:5,0:5:13.64:19,0,14	1/1:1,1:2:4.26:42,4,0	0/1:14,0:6:20.97:21,0,86	0/0:11,3:13:2.76:0,3,17	0/0:11,0:7:0:0,0,0	./.	1/1:10,0:9:2.33:10,2,0	0/1:4,0:4:0:0,0,0	0/0:8,2:10:6.31:0,6,24	0/1:7,1:6:16.01:52,0,16	0/0:9,0:9:2.76:0,3,34	0/0:2,0:2:0.88:0,1,2
chr10	60523284	.	GGC	G	146.19	PASS	AB=0.952;AC=14;AF=0.269;AN=52;BaseQRankSum=2.901;DP=315;FS=35.319;HRun=0;HaplotypeScore=103.2493;InbreedingCoeff=0.0437;MQ=40.08;MQ0=60;MQRankSum=-3.117;QD=1.33;ReadPosRankSum=-2.058;VQSLOD=0.1700;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:8,1:6:1.66:5,2,0	0/0:3,0:2:5.98:0,6,54	0/0:34,1:12:18.64:0,19,438	0/0:33,0:9:10.99:0,11,380	0/0:14,0:11:2.49:0,2,32	0/0:12,1:13:8.02:0,8,64	0/1:4,0:2:0:0,0,0	0/0:19,0:16:9.42:0,9,378	1/1:5,2:7:5.99:50,6,0	0/1:11,1:8:54.85:55,0,107	1/1:5,0:3:0.47:1,0,0	0/1:11,1:11:38.15:38,0,90	0/0:9,0:9:14.98:0,15,154	0/0:4,0:4:3.01:0,3,33	./.	0/1:14,1:14:30.21:39,0,30	0/1:8,1:9:38.03:38,0,91	0/0:1,0:1:3.01:0,3,31	0/1:17,0:3:22.77:23,0,30	0/0:13,1:13:9.01:0,9,95	0/0:12,0:8:0:0,0,0	./.	0/0:13,0:10:2.99:0,3,24	0/1:7,0:6:0:0,0,0	0/0:11,0:11:1.88:0,2,36	0/1:12,1:10:19.96:20,0,119	0/0:10,0:10:12:0,12,118	0/0:3,0:3:6.02:0,6,70
chr10	60526754	.	C	CT	16205.62	PASS	AC=48;AF=0.889;AN=54;BaseQRankSum=6.637;DP=469;FS=12.204;HRun=0;HaplotypeScore=129.5377;InbreedingCoeff=0.9890;MQ=85.51;MQ0=0;MQRankSum=-7.784;QD=40.01;ReadPosRankSum=8.506;VQSLOD=2.4953;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,30:31:81.27:1256,81,0	1/1:1,7:8:21.07:328,21,0	0/0:26,0:26:75.24:0,75,1010	0/0:19,0:18:54.01:0,54,672	1/1:3,19:22:51.17:793,51,0	1/1:2,16:18:51.09:765,51,0	1/1:2,8:10:24.03:347,24,0	0/0:19,0:19:39.18:0,39,228	1/1:2,14:16:39.13:610,39,0	1/1:1,18:19:57.17:840,57,0	1/1:1,16:17:41.99:595,42,0	1/1:1,18:19:45.11:676,45,0	1/1:1,12:13:36.08:535,36,0	1/1:0,18:18:54.18:831,54,0	1/1:0,6:6:15.05:234,15,0	1/1:1,11:12:36.12:556,36,0	1/1:2,17:19:35.20:595,35,0	1/1:0,6:6:18.06:281,18,0	1/1:2,12:14:42.03:553,42,0	1/1:1,18:19:48.15:750,48,0	1/1:1,29:30:81.28:1263,81,0	1/1:3,14:17:36.05:524,36,0	1/1:0,17:17:45.15:696,45,0	1/1:0,13:13:36.12:562,36,0	1/1:0,17:17:48.16:746,48,0	1/1:1,18:19:54.18:844,54,0	1/1:0,25:25:66.22:1024,66,0	./.
chr10	60528335	.	TTG	T	12842.86	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-2.262;DP=347;FS=0.891;HRun=0;HaplotypeScore=49.1647;InbreedingCoeff=0.9124;MQ=81.90;MQ0=3;MQRankSum=-7.647;QD=39.64;ReadPosRankSum=4.763;VQSLOD=6.8548;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,13:13:33.11:505,33,0	1/1:0,4:4:12.04:184,12,0	0/0:13,0:13:33.96:0,34,576	0/0:10,0:10:26.28:0,26,393	1/1:0,17:17:39.13:596,39,0	1/1:0,12:12:36.12:551,36,0	1/1:0,2:2:6.02:91,6,0	1/1:1,29:30:84.27:1264,84,0	1/1:2,18:20:51.17:780,51,0	1/1:0,21:20:60.18:874,60,0	1/1:2,17:18:38.73:585,39,0	1/1:1,9:10:21.07:322,21,0	1/1:0,10:10:24.08:368,24,0	1/1:0,11:11:24.08:367,24,0	1/1:0,7:7:18.06:276,18,0	1/1:0,12:12:30.10:459,30,0	1/1:0,7:7:21:271,21,0	1/1:0,14:14:33.11:504,33,0	1/1:1,10:11:27.09:412,27,0	1/1:2,14:16:42.14:642,42,0	1/1:0,9:9:27.09:413,27,0	1/1:0,5:5:15.05:230,15,0	1/1:0,10:10:27.09:413,27,0	1/1:0,8:8:24.08:367,24,0	1/1:0,8:8:21.07:321,21,0	1/1:0,15:15:45.14:668,45,0	1/1:1,21:21:57.19:873,57,0	1/1:0,11:11:33.11:505,33,0
chr10	60530197	.	G	GT	119.35	PASS	AC=2;AF=0.33;AN=6;BaseQRankSum=-1.592;DP=91;FS=8.671;HRun=0;HaplotypeScore=43.2270;MQ=101.96;MQ0=37;MQRankSum=0.094;QD=13.26;ReadPosRankSum=-2.153;VQSLOD=3.3575;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:23,0:10:9.34:0,9,275	0/0:31,0:19:42.07:0,42,528	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	1/1:5,4:4:12.04:192,12,0	./.	./.	./.	./.	./.	./.	./.	./.	./.
chr10	60540505	.	T	TA	30.01	PASS	AC=2;AF=0.33;AN=6;BaseQRankSum=0.000;DP=26;FS=0.000;HRun=0;HaplotypeScore=47.1702;MQ=25.72;MQ0=8;MQRankSum=-1.380;QD=2.00;ReadPosRankSum=0.720;VQSLOD=1.4398;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	./.	./.	0/0:3,0:1:2.84:0,3,14	./.	./.	0/0:2,0:1:0:0,0,0	./.	./.	./.	./.	./.	./.	./.	./.	1/1:9,5:12:9.69:96,10,0	./.	./.	./.	./.	./.	./.	./.	./.	./.
chr10	60548413	.	T	TG	94.52	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=-3.485;DP=575;FS=3.476;HRun=9;HaplotypeScore=169.2508;InbreedingCoeff=0.6814;MQ=59.19;MQ0=2;MQRankSum=0.213;QD=2.31;ReadPosRankSum=-2.700;VQSLOD=-0.3823;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:72.55:0,73,349	0/0:12,0:12:15.54:0,16,42	0/0:15,0:13:32.91:0,33,272	0/0:14,0:13:29.60:0,30,232	0/1:21,0:21:0.11:0,0,68	0/0:18,0:18:20.20:0,20,54	0/0:22,0:21:22.22:0,22,61	1/1:13,7:17:8.26:177,8,0	0/0:17,0:17:30.81:0,31,148	0/0:28,0:27:35.11:0,35,115	0/0:21,0:21:27.18:0,27,73	0/0:18,0:18:23.58:0,24,63	0/0:19,0:19:25.40:0,25,68	0/0:23,0:23:31.84:0,32,87	0/0:16,0:16:21.77:0,22,59	0/0:16,0:16:23.32:0,23,64	0/0:30,0:30:37.31:0,37,99	0/0:16,0:16:33.73:0,34,172	0/0:19,0:19:25.18:0,25,75	0/0:25,0:24:25.50:0,25,69	0/0:29,0:29:35.92:0,36,97	0/0:17,0:17:18.34:0,18,48	0/0:18,0:18:22.03:0,22,58	0/0:19,0:19:21.76:0,22,58	0/0:18,0:18:20.21:0,20,55	0/0:15,0:15:23.20:0,23,105	0/0:27,0:27:38.94:0,39,106	0/0:10,0:10:19.77:0,20,110
chr10	60548421	.	GGA	G	1508.95	PASS	AB=0.982;AC=42;AF=0.750;AN=56;BaseQRankSum=5.671;DP=567;FS=6.593;HRun=0;HaplotypeScore=151.5077;InbreedingCoeff=0.5359;MQ=62.36;MQ0=1;MQRankSum=2.155;QD=3.05;ReadPosRankSum=5.552;VQSLOD=1.9587;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:50,0:50:39.83:40,0,703	1/1:11,0:11:16.65:56,17,0	0/0:19,0:18:51.06:0,51,731	0/0:14,0:13:38.90:0,39,552	0/1:25,0:25:91.87:92,0,176	1/1:19,0:19:18.98:50,19,0	1/1:22,1:22:1.81:70,2,0	0/1:19,0:17:41.57:85,0,42	0/0:15,0:15:21.39:0,21,259	1/1:25,0:24:0.78:106,1,0	1/1:19,0:19:17.50:52,17,0	1/1:16,0:16:23.32:60,23,0	1/1:19,0:19:20.26:55,20,0	1/1:24,1:25:29.46:113,29,0	1/1:16,0:16:21.46:55,21,0	1/1:16,0:16:22.09:57,22,0	1/1:32,0:32:37.01:97,37,0	0/0:15,0:15:20.92:0,21,285	1/1:19,0:19:15.30:97,15,0	1/1:24,0:24:11.40:78,11,0	1/1:29,1:30:15.02:105,15,0	1/1:16,0:16:21.31:67,21,0	1/1:16,0:16:19.90:52,20,0	1/1:17,0:17:21.77:56,22,0	1/1:16,0:16:19.90:51,20,0	0/1:12,1:13:71.98:72,0,126	1/1:28,0:28:37.51:130,38,0	0/0:10,0:10:23.65:0,24,197
chr10	60548422	.	GA	G	12854.49	PASS	AB=0.970;AC=45;AF=0.804;AN=56;BaseQRankSum=-5.580;DP=562;FS=10.309;HRun=2;HaplotypeScore=100.8657;InbreedingCoeff=0.4551;MQ=62.51;MQ0=0;MQRankSum=3.278;QD=25.01;ReadPosRankSum=2.827;VQSLOD=3.7032;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:46,2:48:99:166,0,148	1/1:0,10:10:30.10:386,30,0	0/0:19,0:18:48:0,48,534	0/0:14,0:13:25.17:0,25,333	0/1:24,1:25:26.02:170,0,26	1/1:0,19:19:39.13:500,39,0	1/1:2,20:22:44.98:536,45,0	1/1:19,0:17:31.15:223,31,0	0/1:17,0:17:30.83:31,0,60	1/1:2,23:24:69.16:832,69,0	1/1:0,19:19:51.15:638,51,0	1/1:1,15:16:45.15:578,45,0	1/1:0,19:19:48.15:608,48,0	1/1:1,24:25:60.09:743,60,0	1/1:0,16:16:42.14:539,42,0	1/1:0,16:16:45.15:577,45,0	1/1:0,31:31:72.23:927,72,0	0/0:15,0:15:9.45:0,9,91	1/1:0,19:19:57.14:685,57,0	1/1:0,24:24:57.10:689,57,0	1/1:1,27:28:69.12:864,69,0	1/1:0,16:16:39.07:482,39,0	1/1:0,16:16:42.14:537,42,0	1/1:0,17:17:42.14:541,42,0	1/1:0,16:16:39.13:501,39,0	0/1:12,1:13:26.39:103,0,26	1/1:3,25:28:81.22:994,81,0	0/1:10,0:10:4.98:5,0,56
chr10	60549227	.	G	GTAA	5270.82	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-9.468;DP=683;FS=13.894;HRun=0;HaplotypeScore=82.0915;InbreedingCoeff=0.9979;MQ=60.69;MQ0=38;MQRankSum=1.942;QD=52.19;ReadPosRankSum=1.485;VQSLOD=6.4590;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,99,1592	0/0:6,0:6:18.06:0,18,284	0/0:36,0:20:51.64:0,52,778	0/0:34,0:23:36.86:0,37,813	0/0:27,0:27:72.25:0,72,1176	1/1:1,21:23:60.21:1327,60,0	1/1:3,15:13:39.13:870,39,0	0/0:68,0:38:99:0,108,1717	0/0:25,0:25:69.20:0,69,1073	0/0:23,0:22:66.23:0,66,1078	0/0:16,0:16:45.09:0,45,676	0/0:15,0:15:42.12:0,42,653	0/0:25,0:25:72.25:0,72,1176	0/0:26,0:25:69.24:0,69,1126	0/0:25,0:24:69.20:0,69,1077	0/0:14,0:14:42.13:0,42,661	0/0:30,0:30:84.29:0,84,1372	0/0:13,0:13:33.11:0,33,523	0/0:27,0:19:57.06:0,57,897	0/0:32,0:26:75.24:0,75,1195	0/0:23,0:22:51.17:0,51,833	1/1:4,17:21:54.19:1199,54,0	1/1:2,18:20:51.18:1137,51,0	1/1:1,17:18:33.58:737,34,0	0/0:23,0:23:69.24:0,69,1127	0/0:17,0:17:48.16:0,48,780	0/0:26,0:25:75.26:0,75,1221	0/0:13,0:13:39.13:0,39,631
chr10	60549984	.	CG	C	898.75	PASS	AB=0.798;AC=13;AF=0.232;AN=56;BaseQRankSum=1.600;DP=397;FS=22.207;HRun=11;HaplotypeScore=54.8499;InbreedingCoeff=0.5004;MQ=59.00;MQ0=4;MQRankSum=0.145;QD=6.97;ReadPosRankSum=4.645;VQSLOD=0.3171;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:17,1:18:10.69:0,11,75	0/0:6,1:7:14.53:0,15,137	0/0:11,0:6:8.35:0,8,56	0/0:4,0:4:0.89:0,1,2	0/1:10,3:10:15.79:16,0,30	0/1:6,6:12:4.04:126,0,4	1/1:5,16:20:34.96:277,35,0	0/0:11,0:11:11.99:0,12,105	0/0:14,0:18:21.83:0,22,152	0/0:16,0:18:20.83:0,21,197	0/0:5,0:5:12:0,12,110	0/0:13,0:12:27:0,27,245	0/1:9,1:9:12.64:13,0,68	0/0:10,0:10:11.52:0,12,97	1/1:2,9:10:17.96:148,18,0	0/0:9,0:9:27.03:0,27,261	0/0:33,2:36:22.65:0,23,596	0/0:21,0:24:40.08:0,40,310	0/0:8,0:5:9.02:0,9,95	0/1:15,0:15:1.29:1,0,94	0/0:21,1:22:8.38:0,8,260	1/1:3,6:9:8.41:98,8,0	0/1:4,8:11:4.90:105,0,5	1/1:10,13:24:36.30:281,36,0	0/0:15,0:16:27.84:0,28,228	0/0:2,0:5:6.35:0,6,47	0/0:23,1:24:23.15:0,23,391	0/0:7,0:7:8.96:0,9,70
chr10	60549995	.	G	GGAGC	221.35	PASS	AB=0.714;AC=1;AF=0.018;AN=56;BaseQRankSum=3.638;DP=410;FS=7.907;HRun=0;HaplotypeScore=86.0598;InbreedingCoeff=-0.0200;MQ=65.38;MQ0=1;MQRankSum=-3.666;QD=14.76;ReadPosRankSum=1.789;VQSLOD=2.6752;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:20:35.99:0,36,467	0/0:6,0:6:18.06:0,18,298	0/0:10,0:7:17.27:0,17,231	0/0:8,0:7:20.73:0,21,254	0/0:12,0:11:27.07:0,27,340	0/0:10,0:10:27.09:0,27,366	0/0:28,0:25:63.18:0,63,827	0/0:10,0:11:27.09:0,27,431	0/0:16,0:16:41.97:0,42,528	0/0:16,0:16:39.13:0,39,631	0/0:9,0:9:24.07:0,24,361	0/0:10,0:9:27.09:0,27,442	0/0:7,0:7:21.05:0,21,290	0/0:11,0:11:23.73:0,24,317	0/0:18,0:17:36.03:0,36,493	0/0:14,0:14:39.07:0,39,634	0/0:31,0:31:90.22:0,90,1399	0/0:20,0:20:56.85:0,57,708	0/0:7,0:7:20.94:0,21,322	0/1:9,4:15:99:296,0,264	0/0:20,0:20:54.13:0,54,785	0/0:13,0:13:35.81:0,36,423	0/0:11,0:10:20.64:0,21,218	0/0:20,0:19:54.17:0,54,709	0/0:19,0:19:42.01:0,42,567	0/0:12,0:12:30.04:0,30,396	0/0:25,0:25:66.19:0,66,1038	0/0:9,0:9:18.05:0,18,255
chr10	60550105	.	A	AG	12135.21	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-5.575;DP=469;FS=5.693;HRun=3;HaplotypeScore=49.7246;InbreedingCoeff=0.8905;MQ=58.51;MQ0=4;MQRankSum=-0.661;QD=28.35;ReadPosRankSum=3.300;VQSLOD=3.8603;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,41:37:81.27:1133,81,0	1/1:1,5:6:12.04:168,12,0	0/0:19,0:14:39.09:0,39,451	0/0:22,0:20:56.87:0,57,658	1/1:0,10:9:21.07:291,21,0	1/1:1,15:14:33.11:462,33,0	1/1:0,17:11:21.07:293,21,0	1/1:3,9:10:21.05:274,21,0	1/1:0,13:11:30.10:420,30,0	1/1:4,11:12:21.07:294,21,0	1/1:0,9:6:15.05:209,15,0	1/1:1,11:9:24.08:336,24,0	1/1:1,13:13:39.12:531,39,0	1/1:0,13:12:27.09:378,27,0	1/1:0,11:9:27.09:378,27,0	1/1:0,6:6:12.04:168,12,0	1/1:1,31:31:75.25:1048,75,0	1/1:2,26:27:63.21:882,63,0	1/1:1,13:12:33.11:462,33,0	1/1:0,11:9:12.04:168,12,0	1/1:1,30:28:78.26:1091,78,0	1/1:2,11:8:15.05:210,15,0	1/1:1,7:7:12.04:167,12,0	1/1:1,21:21:51.17:713,51,0	1/1:1,19:18:36.12:504,36,0	1/1:2,21:19:42.06:549,42,0	1/1:0,24:23:63.21:881,63,0	1/1:0,4:4:9.03:126,9,0
chr10	60550970	.	TGAGAGA	T	12850.38	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-2.383;DP=623;FS=9.055;HRun=0;HaplotypeScore=145.0561;InbreedingCoeff=0.8087;MQ=63.92;MQ0=9;MQRankSum=-4.443;QD=26.83;ReadPosRankSum=6.217;VQSLOD=3.2150;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:18,19:34:32.47:699,32,0	1/1:1,7:7:12.04:255,12,0	0/0:49,0:29:42.06:0,42,1071	0/0:62,0:34:32.55:0,33,732	1/1:6,12:17:2.12:484,2,0	1/1:8,17:26:42.14:870,42,0	1/1:6,11:16:24.08:509,24,0	0/0:17,1:28:8.31:0,8,101	1/1:9,8:15:21.07:446,21,0	1/1:10,5:14:15.03:278,15,0	1/1:9,16:26:42.14:870,42,0	1/1:9,9:18:18.06:382,18,0	1/1:6,7:13:24.08:487,24,0	1/1:5,10:14:30.10:637,30,0	1/1:4,14:17:30.10:637,30,0	1/1:8,13:20:24.08:509,24,0	1/1:13,17:30:32.60:646,33,0	1/1:3,11:11:15.05:319,15,0	1/1:13,6:18:15.05:305,15,0	1/1:8,11:20:30.10:615,30,0	1/1:13,10:23:15.01:275,15,0	1/1:10,6:16:18.06:382,18,0	1/1:6,9:15:24.08:488,24,0	1/1:13,7:17:5.79:127,6,0	1/1:2,14:17:42.14:848,42,0	1/1:5,14:21:48.16:957,48,0	1/1:5,17:19:33.11:700,33,0	1/1:7,2:9:6.02:127,6,0
chr10	60552608	.	TGG	T	5409.27	PASS	AB=0.552;AC=45;AF=0.804;AN=56;BaseQRankSum=-4.540;DP=579;FS=28.029;HRun=10;HaplotypeScore=48.3725;InbreedingCoeff=0.1674;MQ=41.41;MQ0=37;MQRankSum=7.567;QD=10.21;ReadPosRankSum=7.751;VQSLOD=0.4833;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,30:22:33.03:354,33,0	0/1:2,8:8:17.87:119,0,18	0/0:19,0:10:29.99:0,30,420	0/0:29,0:15:45.13:0,45,655	1/1:2,11:7:6.01:67,6,0	1/1:3,20:13:27.05:301,27,0	1/1:7,19:14:9:100,9,0	1/1:7,5:1:2.99:24,3,0	1/1:5,26:17:33.08:368,33,0	1/1:7,26:18:17.28:340,17,0	1/1:5,8:8:6:65,6,0	1/1:2,16:12:21.05:234,21,0	1/1:1,32:20:19.28:380,19,0	0/1:6,22:16:3.53:270,0,4	0/1:2,23:12:10.73:207,0,11	0/1:2,20:8:13.53:179,0,14	0/1:6,15:14:11.96:179,0,12	1/1:4,9:8:18.05:201,18,0	1/1:4,4:7:8.99:88,9,0	0/1:6,20:15:23.39:237,0,23	1/1:5,11:12:21.05:233,21,0	1/1:6,20:18:29.55:291,30,0	1/1:2,17:12:17.95:200,18,0	1/1:1,13:8:18.05:200,18,0	1/1:3,8:8:9.02:100,9,0	1/1:0,20:9:27.07:301,27,0	0/1:5,19:15:22.85:236,0,23	1/1:0,5:4:12.03:134,12,0
chr10	60553167	.	A	AT	12014.33	PASS	AB=0.941;AC=51;AF=0.944;AN=54;BaseQRankSum=-6.594;DP=420;FS=11.189;HRun=6;HaplotypeScore=42.8892;InbreedingCoeff=0.7825;MQ=70.30;MQ0=3;MQRankSum=1.708;QD=30.49;ReadPosRankSum=3.991;VQSLOD=4.5262;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,16:21:17.23:500,17,0	1/1:1,5:6:12.04:151,12,0	0/0:26,0:22:22.62:0,23,341	0/1:15,0:10:1.43:1,0,157	1/1:2,17:19:51.12:624,51,0	1/1:0,15:15:45.14:566,45,0	1/1:1,6:7:18.06:226,18,0	1/1:2,28:30:84.21:1005,84,0	1/1:4,17:21:48.15:604,48,0	1/1:0,13:13:39.11:475,39,0	1/1:1,22:23:63.20:789,63,0	1/1:1,18:19:28.52:651,29,0	1/1:0,14:14:39.12:490,39,0	1/1:1,14:15:33.11:415,33,0	1/1:1,10:11:30.10:377,30,0	1/1:1,10:11:27.09:340,27,0	1/1:1,13:13:39.12:490,39,0	1/1:1,14:15:33.11:415,33,0	1/1:2,9:11:27.09:340,27,0	1/1:1,14:15:42.13:528,42,0	1/1:1,6:6:15.05:189,15,0	1/1:1,11:12:30.10:377,30,0	1/1:1,14:15:36.12:453,36,0	./.	1/1:1,13:14:30.10:377,30,0	1/1:0,19:19:57.15:686,57,0	1/1:3,12:15:33.11:415,33,0	1/1:1,15:16:41.73:527,42,0
chr10	60555540	.	CT	C	14747.47	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=3.251;DP=577;FS=3.421;HRun=1;HaplotypeScore=98.3687;InbreedingCoeff=0.9796;MQ=72.32;MQ0=20;MQRankSum=-10.454;QD=28.04;ReadPosRankSum=8.415;VQSLOD=4.1767;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,30:24:60.15:726,60,0	1/1:0,10:9:24.08:298,24,0	0/0:26,0:26:60.71:0,61,1163	0/0:25,0:25:75.06:0,75,1129	1/1:1,20:20:48.15:595,48,0	1/1:0,17:15:39.12:482,39,0	1/1:0,10:8:24.08:297,24,0	1/1:3,17:11:12.02:136,12,0	1/1:0,21:18:45.14:558,45,0	1/1:0,25:22:60.19:743,60,0	1/1:0,19:15:30.09:371,30,0	1/1:1,19:19:51.16:630,51,0	1/1:0,21:19:51.16:631,51,0	1/1:0,16:16:42.13:524,42,0	1/1:1,28:27:66.21:817,66,0	1/1:0,24:21:60.19:743,60,0	1/1:0,13:13:36.11:446,36,0	1/1:0,11:11:33.10:409,33,0	1/1:0,13:8:21.07:260,21,0	1/1:1,38:32:78.25:966,78,0	1/1:0,20:17:39.04:449,39,0	1/1:1,20:18:48.15:592,48,0	1/1:0,14:13:33.10:409,33,0	1/1:0,24:24:66.21:817,66,0	1/1:0,20:19:57.14:689,57,0	1/1:1,21:19:51.13:616,51,0	1/1:0,26:23:66.21:817,66,0	1/1:0,20:20:60.15:726,60,0
chr10	60558050	.	GT	G	7416.37	PASS	AB=0.938;AC=54;AF=0.964;AN=56;BaseQRankSum=-0.657;DP=518;FS=19.077;HRun=11;HaplotypeScore=61.4002;InbreedingCoeff=0.0613;MQ=68.38;MQ0=3;MQRankSum=-3.601;QD=14.32;ReadPosRankSum=3.144;VQSLOD=3.4679;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,30:36:78.37:640,78,0	1/1:1,5:6:14.98:123,15,0	0/1:12,1:10:6.19:6,0,172	0/1:8,0:7:23.88:24,0,63	1/1:2,19:21:24.94:411,25,0	1/1:3,0:19:32.59:94,33,0	1/1:1,1:16:29.48:101,29,0	1/1:10,23:32:29.08:432,29,0	1/1:3,13:16:35.94:296,36,0	1/1:10,14:24:9.89:284,10,0	1/1:8,22:31:61.12:481,61,0	1/1:1,17:19:46.98:375,47,0	1/1:1,14:15:41.95:345,42,0	1/1:4,16:20:38.94:320,39,0	1/1:4,10:14:0.98:214,1,0	1/1:4,11:15:29.93:246,30,0	1/1:3,18:21:53.93:443,54,0	1/1:1,10:12:32:252,32,0	1/1:5,11:16:26.90:222,27,0	1/1:4,18:22:41.89:344,42,0	1/1:1,8:9:3.75:174,4,0	1/1:5,0:15:23.33:80,23,0	1/1:5,2:28:50.80:179,51,0	1/1:4,0:17:22.41:65,22,0	1/1:4,12:16:6.97:264,7,0	1/1:1,24:25:36.97:510,37,0	1/1:6,19:25:50.91:418,51,0	1/1:0,3:3:8.99:74,9,0
chr10	60564729	.	CT	C	614.07	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.420;DP=789;FS=17.883;HRun=1;HaplotypeScore=49.2784;InbreedingCoeff=0.7792;MQ=43.79;MQ0=194;MQRankSum=-5.919;QD=18.06;ReadPosRankSum=-1.664;VQSLOD=2.1492;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:60,0:46:81.23:0,81,1262	0/0:12,0:11:27.09:0,27,431	0/0:46,0:2:4.23:0,4,26	0/0:30,0:2:6.02:0,6,76	0/0:29,0:21:48.16:0,48,767	0/0:25,0:14:30.10:0,30,479	0/0:44,0:29:48.16:0,48,753	1/1:10,24:17:51.17:709,51,0	0/0:28,0:24:54.01:0,54,863	0/0:29,0:17:51.17:0,51,814	0/0:15,0:12:21.07:0,21,335	0/0:23,0:21:27.09:0,27,427	0/0:24,0:21:51.17:0,51,814	0/0:28,0:26:42.14:0,42,665	0/0:30,0:30:42.13:0,42,648	0/0:22,0:20:41.91:0,42,671	0/0:23,0:23:48.16:0,48,767	0/0:33,0:33:42.14:0,42,671	0/0:17,0:7:18.04:0,18,263	0/0:31,0:28:60.08:0,60,957	0/0:35,0:26:54.16:0,54,835	0/0:23,0:13:36.11:0,36,552	0/0:32,0:21:33.05:0,33,476	0/0:43,0:40:72.25:0,72,1150	0/0:22,0:20:42.14:0,42,671	0/0:21,0:15:45.15:0,45,718	0/0:25,0:20:26.73:0,27,431	0/0:5,0:5:15.05:0,15,240
chr10	60567350	.	ATTG	A	750.51	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.878;DP=672;FS=2.003;HRun=0;HaplotypeScore=93.4035;InbreedingCoeff=0.9604;MQ=61.48;MQ0=1;MQRankSum=-1.723;QD=25.02;ReadPosRankSum=-4.252;VQSLOD=2.3014;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:24:51.17:0,51,1117	0/0:10,0:9:18.06:0,18,401	0/0:20,0:18:45.15:0,45,961	0/0:18,0:11:33.11:0,33,667	0/0:33,0:31:84.29:0,84,1877	0/0:23,0:23:42.14:0,42,914	0/0:16,0:16:39.06:0,39,755	1/1:4,26:22:54.17:845,54,0	0/0:31,0:31:57.06:0,57,1272	0/0:33,0:33:90.25:0,90,1964	0/0:34,0:29:78.27:0,78,1742	0/0:22,0:22:36.12:0,36,804	0/0:21,0:21:48.16:0,48,1045	0/0:32,0:32:39.13:0,39,871	0/0:35,0:35:78.25:0,78,1655	0/0:20,0:20:47.95:0,48,1071	0/0:32,0:32:75.20:0,75,1586	0/0:12,0:11:12.04:0,12,268	0/0:20,0:18:51.18:0,51,1121	0/0:31,0:28:78.25:0,78,1671	0/0:16,0:16:42.14:0,42,894	0/0:26,0:25:69.23:0,69,1498	0/0:28,0:28:75.22:0,75,1649	0/0:23,0:23:54.17:0,54,1165	0/0:19,0:18:42.14:0,42,939	0/0:25,0:25:72.25:0,72,1586	0/0:26,0:26:60.21:0,60,1338	0/0:11,0:11:24.08:0,24,536
chr10	60567471	.	C	CA	6642.12	PASS	AB=0.537;AC=49;AF=0.942;AN=52;BaseQRankSum=-2.480;DP=601;FS=5.163;HRun=3;HaplotypeScore=67.9328;InbreedingCoeff=0.3352;MQ=53.33;MQ0=3;MQRankSum=-0.187;QD=12.03;ReadPosRankSum=-1.419;VQSLOD=2.5818;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,23:25:5.65:84,6,0	1/1:0,11:11:29.93:369,30,0	0/0:19,0:2:6.01:0,6,61	./.	1/1:3,15:16:8.83:102,9,0	1/1:2,25:26:6.02:80,6,0	1/1:1,19:19:15.05:209,15,0	1/1:3,20:15:42.12:555,42,0	1/1:1,23:24:3.01:42,3,0	1/1:4,24:26:3.34:883,3,0	1/1:0,6:6:8.99:103,9,0	1/1:1,13:14:8.75:126,9,0	1/1:1,14:15:6.02:84,6,0	0/1:4,25:27:0:0,0,0	1/1:5,24:26:9.03:126,9,0	1/1:2,18:18:8.99:104,9,0	./.	1/1:4,25:25:3.01:42,3,0	1/1:0,20:20:60.18:820,60,0	1/1:1,17:17:35.97:454,36,0	1/1:0,23:23:27.05:354,27,0	1/1:2,21:23:8.99:104,9,0	1/1:1,17:18:18.06:248,18,0	1/1:1,30:31:6.02:84,6,0	1/1:1,17:17:5.82:84,6,0	1/1:0,23:23:66.15:881,66,0	1/1:6,34:36:38.78:494,39,0	1/1:0,18:18:15.05:210,15,0
chr10	60569658	.	C	CATT	3636.13	PASS	AB=0.845;AC=16;AF=0.286;AN=56;BaseQRankSum=-5.146;DP=881;FS=5.312;HRun=0;HaplotypeScore=176.6986;InbreedingCoeff=-0.3998;MQ=57.90;MQ0=48;MQRankSum=-11.528;QD=6.78;ReadPosRankSum=-5.309;VQSLOD=0.4013;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:50,11:60:99:455,0,2038	0/1:6,4:10:99:176,0,273	0/0:24,0:21:45.15:0,45,715	0/0:36,0:28:56.93:0,57,928	0/1:34,4:38:95.09:95,0,1514	0/0:30,0:29:81.28:0,81,1337	0/0:25,0:19:51.17:0,51,849	0/0:45,0:44:99:0,129,2046	0/0:25,2:24:66.20:0,66,1050	0/1:33,7:42:99:423,0,1158	0/1:26,7:30:99:244,0,783	0/0:10,4:10:24.08:0,24,400	0/0:23,3:23:20.33:0,20,910	0/1:25,6:28:99:158,0,1115	0/1:33,6:34:99:104,0,1376	0/0:21,3:19:57.18:0,57,924	0/1:29,8:36:99:292,0,1341	0/1:19,3:21:78.70:79,0,724	0/1:24,6:29:99:392,0,839	0/1:28,10:38:99:508,0,1091	0/1:31,8:40:99:339,0,1288	0/0:28,0:26:75.24:0,75,1208	0/0:40,0:36:96.33:0,96,1588	0/0:26,0:23:66.23:0,66,1095	0/1:22,3:25:66.48:66,0,980	0/1:31,7:37:99:264,0,1344	0/1:30,2:29:18.36:18,0,1237	0/1:15,1:16:22.77:23,0,654
chr10	60571728	.	G	GTT	14239.85	PASS	AB=1.000;AC=53;AF=0.946;AN=56;BaseQRankSum=-3.706;DP=416;FS=10.048;HRun=7;HaplotypeScore=62.1809;InbreedingCoeff=0.3591;MQ=68.33;MQ0=2;MQRankSum=-2.564;QD=35.25;ReadPosRankSum=3.383;VQSLOD=3.8169;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,16:18:41.63:649,42,0	1/1:0,6:6:18.02:266,18,0	0/1:16,0:9:26.64:27,0,140	0/0:12,0:10:2.17:0,2,155	1/1:1,23:24:63.22:1034,63,0	1/1:1,1:13:27.04:261,27,0	1/1:1,0:8:18.03:187,18,0	1/1:5,18:23:54.18:864,54,0	1/1:0,9:9:24.08:394,24,0	1/1:3,19:21:54.18:871,54,0	1/1:1,20:22:61.68:921,62,0	1/1:0,10:10:21.07:345,21,0	1/1:1,13:14:32.60:501,33,0	1/1:2,16:18:45.15:735,45,0	1/1:1,12:13:30.10:492,30,0	1/1:0,15:15:39.13:640,39,0	1/1:3,11:16:30.10:492,30,0	1/1:0,11:12:32.60:501,33,0	1/1:2,12:15:39.10:588,39,0	1/1:5,26:32:81.21:1273,81,0	1/1:1,1:2:3.01:49,3,0	1/1:6,0:9:9.01:87,9,0	1/1:0,0:7:15.03:147,15,0	1/1:0,1:9:21.03:203,21,0	1/1:1,19:20:54.18:886,54,0	1/1:5,17:21:48.16:781,48,0	1/1:4,13:18:42.14:653,42,0	1/1:0,7:8:24.08:393,24,0
chr10	60572652	.	GA	G	3121.36	PASS	AB=0.924;AC=45;AF=0.804;AN=56;BaseQRankSum=-4.216;DP=481;FS=2.159;HRun=11;HaplotypeScore=73.5044;InbreedingCoeff=0.3587;MQ=49.89;MQ0=25;MQRankSum=3.252;QD=7.14;ReadPosRankSum=3.471;VQSLOD=2.1632;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:35,2:33:40.33:321,40,0	1/1:9,1:9:2.98:25,3,0	0/0:15,0:6:10.16:0,10,72	0/0:10,1:5:9.08:0,9,48	0/1:29,3:28:0.40:140,0,0	1/1:15,0:14:16.59:42,17,0	0/1:18,0:14:2.95:3,0,21	1/1:4,1:3:2.98:25,3,0	1/1:15,6:18:23.57:183,24,0	0/1:14,1:10:7.89:54,0,8	0/1:15,3:13:3.28:100,0,3	1/1:11,1:10:13.58:120,14,0	1/1:11,3:12:23.96:197,24,0	1/1:18,1:16:17.94:147,18,0	1/1:11,4:12:17.96:147,18,0	1/1:6,3:9:16.53:127,17,0	1/1:17,1:17:10.01:284,10,0	0/1:8,0:6:19.31:62,0,19	1/1:7,1:5:11.99:98,12,0	1/1:26,2:27:31.68:251,32,0	1/1:13,2:11:11.96:98,12,0	1/1:20,0:20:7.69:27,8,0	0/0:16,0:15:2.86:0,3,9	1/1:15,0:13:0.56:4,1,0	1/1:17,4:17:32.91:264,33,0	1/1:15,2:15:7.18:137,7,0	1/1:24,4:25:41.38:310,41,0	1/1:7,2:9:11.95:98,12,0
chr10	60572662	.	A	AG	1193.96	PASS	AB=0.900;AC=24;AF=0.429;AN=56;BaseQRankSum=0.639;DP=496;FS=3.153;HRun=0;HaplotypeScore=90.7395;InbreedingCoeff=-0.2935;MQ=53.72;MQ0=21;MQRankSum=0.311;QD=3.19;ReadPosRankSum=8.133;VQSLOD=2.0991;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:30,4:29:35.17:124,0,35	0/1:9,3:10:8.37:9,0,8	0/0:21,0:11:16.60:0,17,188	0/1:16,0:6:3.76:4,0,51	0/1:23,6:25:43.36:43,0,45	0/0:23,0:18:35.25:0,35,111	0/0:16,0:12:22.53:0,23,79	0/0:10,1:9:17.45:0,17,67	1/1:15,2:15:1.41:62,1,0	0/1:16,1:14:4.51:5,0,40	0/1:12,4:13:37:70,0,37	0/1:8,2:8:5.06:62,0,5	0/1:16,1:14:11.37:72,0,11	0/1:20,2:19:19.97:56,0,20	1/1:9,3:10:6.56:59,7,0	0/1:11,0:11:6.97:55,0,7	0/1:23,2:23:37.24:146,0,37	0/1:8,1:8:23.35:38,0,23	0/1:9,2:8:9.31:23,0,9	0/1:18,6:23:29.11:105,0,29	0/1:13,2:11:18.28:35,0,18	0/0:20,0:19:27.02:0,27,84	0/0:17,0:16:16.29:0,16,57	0/0:14,0:11:15.51:0,16,52	1/1:17,5:19:2.95:136,3,0	0/1:17,0:16:21.41:62,0,21	0/1:26,4:27:16.81:154,0,17	0/1:8,0:8:15.25:34,0,15
chr10	60572665	.	AG	A	4622.77	PASS	AB=0.797;AC=39;AF=0.696;AN=56;BaseQRankSum=-2.336;DP=516;FS=12.116;HRun=1;HaplotypeScore=82.8702;InbreedingCoeff=-0.0992;MQ=54.92;MQ0=20;MQRankSum=1.590;QD=9.71;ReadPosRankSum=4.833;VQSLOD=1.3283;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:25,10:29:15.22:303,0,15	1/1:8,4:10:8.17:41,8,0	0/0:21,0:12:10.77:0,11,225	0/0:18,0:6:8:0,8,125	1/1:21,8:26:13.14:214,13,0	1/1:11,15:20:50.09:523,50,0	0/1:8,10:14:11.59:277,0,12	1/1:12,1:11:8.27:134,8,0	0/1:16,3:17:38.77:43,0,39	1/1:15,5:17:6.22:161,6,0	0/1:12,5:14:32.38:37,0,32	1/1:7,3:9:17.63:154,18,0	0/1:14,3:14:18.56:95,0,19	1/1:13,8:18:7.04:219,7,0	0/1:10,4:12:1.85:152,0,2	0/1:8,4:12:3.04:125,0,3	1/1:19,6:23:9.65:229,10,0	0/1:7,1:7:4.25:39,0,4	0/1:8,2:7:8.54:38,0,9	1/1:15,9:23:39.51:253,40,0	0/1:13,3:12:38.65:77,0,39	1/1:3,17:19:33.25:379,33,0	1/1:7,9:15:17.42:206,17,0	1/1:3,11:11:20.43:243,20,0	0/1:16,8:21:9.81:184,0,10	0/1:13,4:16:18.82:97,0,19	1/1:20,10:27:23.72:343,24,0	0/1:6,2:8:21.25:56,0,21
chr10	60572666	.	G	GA	8548.29	PASS	AB=0.902;AC=49;AF=0.875;AN=56;BaseQRankSum=-3.561;DP=524;FS=28.873;HRun=9;HaplotypeScore=72.0508;InbreedingCoeff=0.3994;MQ=54.72;MQ0=20;MQRankSum=0.216;QD=17.70;ReadPosRankSum=1.936;VQSLOD=3.4828;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:31,4:29:11.98:567,12,0	1/1:11,1:10:9.02:100,9,0	0/0:22,0:12:27.02:0,27,215	0/0:18,0:7:0.17:0,0,65	1/1:25,6:28:45.10:480,45,0	1/1:23,3:20:49.35:499,49,0	0/1:17,2:14:3.54:264,0,4	1/1:3,10:11:30.03:309,30,0	1/1:13,5:16:12.03:133,12,0	1/1:13,6:17:44.93:464,45,0	1/1:16,1:14:11.12:167,11,0	1/1:11,0:9:24.06:261,24,0	1/1:13,4:13:7.06:306,7,0	1/1:17,4:18:48.13:529,48,0	1/1:13,1:12:24.06:258,24,0	1/1:12,0:12:24.06:263,24,0	1/1:23,3:24:60.15:655,60,0	1/1:4,4:7:12.03:133,12,0	1/1:9,3:9:15.04:166,15,0	1/1:23,1:23:51.14:563,51,0	0/1:12,4:12:4.98:178,0,5	1/1:18,2:19:36.02:354,36,0	1/1:14,2:15:18:164,18,0	1/1:14,0:11:21.02:200,21,0	1/1:24,0:21:16.48:391,16,0	1/1:16,3:18:35.08:396,35,0	1/1:26,4:27:59.76:604,60,0	0/1:8,0:8:8:148,0,8
chr10	60574454	.	G	GTAC	5670	PASS	AB=0.605;AC=5;AF=0.089;AN=56;BaseQRankSum=-12.386;DP=704;FS=0.868;HRun=0;HaplotypeScore=95.5296;InbreedingCoeff=-0.0984;MQ=57.17;MQ0=24;MQRankSum=4.142;QD=33.95;ReadPosRankSum=3.516;VQSLOD=5.5725;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:63.21:0,63,1006	0/0:6,0:6:15.05:0,15,239	0/0:29,0:19:42.14:0,42,650	0/0:25,0:21:54.17:0,54,807	0/0:30,0:30:81.25:0,81,1255	0/1:18,30:40:99:1744,0,141	0/1:7,13:18:99:746,0,145	0/0:52,0:39:99:0,111,1759	0/0:16,0:16:45.14:0,45,700	0/0:31,0:31:87.28:0,87,1357	0/0:33,0:33:96.33:0,96,1536	0/0:19,0:19:51.17:0,51,819	0/0:14,0:14:42.13:0,42,645	0/0:23,0:23:63.21:0,63,1013	0/0:17,0:17:51.17:0,51,819	0/0:18,0:18:51.17:0,51,815	0/0:24,0:24:66.14:0,66,1005	0/0:18,0:18:48.16:0,48,764	0/0:22,0:22:60.20:0,60,955	0/0:30,0:30:81.24:0,81,1253	0/0:23,0:23:63.20:0,63,977	0/1:16,27:38:99:1309,0,208	0/1:9,23:27:30.12:1258,0,30	0/1:8,12:21:99:614,0,241	0/0:13,0:13:36.12:0,36,562	0/0:30,0:30:84.29:0,84,1345	0/0:31,0:31:81.26:0,81,1277	0/0:12,0:12:24.08:0,24,386
chr10	60578401	.	A	AG	1445.29	PASS	AB=0.625;AC=39;AF=0.975;AN=40;BaseQRankSum=-1.260;DP=117;FS=0.000;HRun=6;HaplotypeScore=10.4265;InbreedingCoeff=-0.1419;MQ=39.47;MQ0=13;MQRankSum=1.417;QD=13.26;ReadPosRankSum=-0.551;VQSLOD=0.2226;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,7:8:18.06:226,18,0	./.	./.	./.	1/1:2,4:6:9.03:113,9,0	./.	1/1:3,2:1:3.01:38,3,0	1/1:6,1:1:3.01:38,3,0	1/1:0,6:6:12.04:151,12,0	1/1:3,3:4:6.02:75,6,0	./.	1/1:1,4:6:9.03:113,9,0	1/1:0,2:2:3.01:38,3,0	1/1:0,5:5:3.01:38,3,0	1/1:3,3:6:3.01:38,3,0	1/1:1,5:6:9.03:113,9,0	1/1:2,0:2:3:25,3,0	1/1:0,1:1:3.01:38,3,0	./.	1/1:1,6:4:8.99:95,9,0	1/1:3,3:6:6.02:75,6,0	1/1:2,3:5:5.98:58,6,0	1/1:1,2:3:2.43:16,2,0	./.	0/1:4,6:8:10.23:89,0,10	1/1:3,1:4:3.01:38,3,0	1/1:0,8:7:9.03:113,9,0	./.
chr10	60578436	.	A	AG	197.29	PASS	AC=10;AF=0.192;AN=52;BaseQRankSum=-0.928;DP=159;FS=8.788;HRun=8;HaplotypeScore=23.6510;InbreedingCoeff=0.6356;MQ=67.66;MQ0=5;MQRankSum=-4.790;QD=8.97;ReadPosRankSum=-1.412;VQSLOD=-0.2932;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:21.01:0,21,192	0/0:2,0:2:6:0,6,55	0/0:5,0:3:2.18:0,2,49	0/0:10,0:7:9.42:0,9,68	0/0:14,0:14:39.02:0,39,355	1/1:0,0:4:2.84:14,3,0	1/1:2,0:2:2.97:20,3,0	1/1:2,8:8:21.06:242,21,0	0/0:7,0:7:18:0,18,165	0/0:5,0:4:12:0,12,106	0/0:3,0:3:6:0,6,55	0/0:6,0:6:15.01:0,15,137	0/0:3,0:3:6:0,6,55	0/0:7,0:7:12.01:0,12,110	0/0:8,0:8:18.01:0,18,165	0/0:3,0:3:3:0,3,27	0/0:5,0:5:14.98:0,15,131	0/0:4,0:4:11.99:0,12,104	0/0:4,0:4:9:0,9,82	0/0:7,0:5:12.01:0,12,110	0/0:4,0:4:12:0,12,106	1/1:1,0:2:2.84:14,3,0	1/1:1,0:4:8.52:43,9,0	./.	0/0:11,0:10:27.01:0,27,247	0/0:6,0:6:15.01:0,15,137	0/0:10,0:9:17.97:0,18,158	./.
chr10	60579611	.	GTT	G	6926.99	PASS	AB=0.561;AC=34;AF=0.630;AN=54;BaseQRankSum=-8.171;DP=512;FS=6.988;HRun=10;HaplotypeScore=47.3222;InbreedingCoeff=0.3351;MQ=56.80;MQ0=20;MQRankSum=5.089;QD=16.81;ReadPosRankSum=2.577;VQSLOD=2.4720;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:3,24:26:8.33:362,0,8	0/1:1,7:8:35.33:88,0,35	0/0:17,0:11:29.65:0,30,365	0/0:10,0:7:15.01:0,15,188	1/1:2,17:19:15.04:167,15,0	0/0:2,0:22:17.51:0,18,149	0/0:5,0:10:11.91:0,12,88	1/1:8,22:30:49.15:707,49,0	0/1:4,13:17:17.29:271,0,17	1/1:3,17:20:9.69:543,10,0	0/1:4,15:19:67.70:207,0,68	1/1:1,13:13:33.09:368,33,0	1/1:3,10:12:21.06:234,21,0	1/1:4,17:20:39.11:435,39,0	1/1:2,23:25:3.71:488,4,0	1/1:1,14:14:24.06:268,24,0	1/1:3,17:18:9.02:100,9,0	0/1:2,8:9:0.89:149,0,1	1/1:2,21:23:63.13:683,63,0	0/1:5,27:31:8.42:361,0,8	1/1:2,12:14:18.05:201,18,0	0/0:3,0:11:9.02:0,9,105	0/0:5,0:9:10.54:0,11,83	./.	0/1:4,18:21:67.80:205,0,68	1/1:3,16:19:48.07:514,48,0	1/1:2,31:30:6.65:521,7,0	0/1:3,4:7:54.85:55,0,83
chr10	60580738	.	T	TA	2861.79	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-10.231;DP=516;FS=2.129;HRun=4;HaplotypeScore=46.9958;InbreedingCoeff=0.9939;MQ=74.67;MQ0=4;MQRankSum=1.134;QD=33.67;ReadPosRankSum=1.112;VQSLOD=4.0541;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:54.15:0,54,612	0/0:9,0:9:24.07:0,24,272	0/0:11,1:12:27.07:0,27,306	0/0:15,0:15:39.08:0,39,419	0/0:24,0:24:72.21:0,72,817	1/1:0,29:29:78.26:1067,78,0	1/1:3,9:10:27.09:369,27,0	0/0:40,0:39:99:0,111,1226	0/0:22,0:22:60.14:0,60,661	0/0:26,0:26:75.21:0,75,849	0/0:23,0:23:69.18:0,69,770	0/0:10,0:10:27.08:0,27,306	0/0:18,0:18:54.14:0,54,603	0/0:22,0:21:60.17:0,60,681	0/0:19,0:19:54.15:0,54,612	0/0:15,0:15:45.11:0,45,501	0/0:12,0:12:36.10:0,36,408	0/0:8,0:8:15.04:0,15,170	0/0:20,0:20:57.12:0,57,626	0/0:21,0:21:54.15:0,54,613	0/0:13,0:13:39.11:0,39,442	1/1:2,17:18:48.16:657,48,0	1/1:0,16:16:42.14:574,42,0	1/1:0,9:9:27.09:369,27,0	0/0:13,0:13:39.11:0,39,442	0/0:30,0:30:87.24:0,87,978	0/0:31,0:31:90.22:0,90,1007	0/0:9,0:9:21.05:0,21,238
chr10	60582201	.	C	CCA	5145.97	PASS	AC=50;AF=0.962;AN=52;BaseQRankSum=2.409;DP=338;FS=11.487;HRun=0;HaplotypeScore=133.7860;InbreedingCoeff=0.3983;MQ=33.91;MQ0=9;MQRankSum=-1.174;QD=16.03;ReadPosRankSum=1.432;VQSLOD=4.6454;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,6:7:6.02:79,6,0	1/1:4,8:12:26.71:255,27,0	0/0:3,0:2:2.94:0,3,18	./.	1/1:3,13:15:22.20:205,22,0	1/1:0,12:5:15.03:155,15,0	1/1:3,14:14:39.08:417,39,0	./.	1/1:2,14:8:21.01:208,21,0	1/1:3,16:17:42.28:492,42,0	1/1:2,9:12:20.95:175,21,0	1/1:3,8:9:24.01:251,24,0	1/1:1,10:6:17.96:150,18,0	1/1:3,9:9:17.92:156,18,0	1/1:1,10:7:20.99:192,21,0	1/1:3,6:5:12:109,12,0	1/1:0,6:4:8.74:71,9,0	1/1:0,3:1:3.01:32,3,0	1/1:1,4:2:6.01:63,6,0	1/1:6,7:13:12.02:150,12,0	1/1:1,4:5:11.98:102,12,0	1/1:10,36:38:68.30:647,68,0	1/1:2,16:18:35.93:307,36,0	1/1:0,7:3:8.94:66,9,0	1/1:0,16:16:33:305,33,0	1/1:3,13:13:32.94:340,33,0	1/1:3,10:7:14.96:128,15,0	1/1:0,5:3:9.02:92,9,0
chr10	60587507	.	CGAAGCTA	C	1521.72	PASS	AB=0.723;AC=3;AF=0.054;AN=56;BaseQRankSum=5.533;DP=1058;FS=6.794;HRun=0;HaplotypeScore=287.2533;InbreedingCoeff=-0.0573;MQ=55.94;MQ0=34;MQRankSum=-7.069;QD=18.12;ReadPosRankSum=-0.720;VQSLOD=1.5687;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:96,0:96:99:0,208,7739	0/0:15,0:15:45.10:0,45,1648	0/0:23,0:9:17.36:0,17,226	0/0:28,0:13:30.07:0,30,668	0/0:40,0:37:96.19:0,96,3335	0/1:19,5:21:99:116,0,1432	0/0:19,9:18:39:0,39,1177	0/0:21,2:17:48.16:0,48,1750	0/0:50,0:50:99:0,108,3951	0/0:41,0:40:99:0,114,4393	0/0:35,0:35:93.31:0,93,3457	0/0:32,0:31:65.59:0,66,2419	0/0:34,0:34:81.15:0,81,3070	0/0:38,0:38:87.30:0,87,3315	0/0:45,0:45:99:0,102,3812	0/0:35,0:35:81.28:0,81,3063	0/0:48,0:47:90.24:0,90,3302	0/0:40,0:38:87.25:0,87,3235	0/0:34,0:29:87.26:0,87,3079	0/0:39,0:38:99:0,111,4141	0/0:94,0:93:99:0,223,8368	0/1:11,15:23:99:808,0,1077	0/1:20,14:33:99:698,0,1712	0/0:15,6:13:18.06:0,18,708	0/0:31,0:25:75.26:0,75,2696	0/0:43,0:43:99:0,126,4803	0/0:47,0:45:99:0,114,4239	0/0:13,0:13:36.12:0,36,1330
chr10	60587920	.	C	CT	3823.34	PASS	AB=0.825;AC=40;AF=0.714;AN=56;BaseQRankSum=-3.832;DP=266;FS=1.067;HRun=10;HaplotypeScore=49.1166;InbreedingCoeff=0.6639;MQ=64.98;MQ0=3;MQRankSum=1.274;QD=18.12;ReadPosRankSum=-1.265;VQSLOD=3.7241;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,8:11:15.92:162,16,0	1/1:1,2:3:6.02:64,6,0	0/0:7,0:7:5.92:0,6,49	0/0:4,0:4:2.84:0,3,9	1/1:5,7:10:12.03:127,12,0	0/0:6,0:13:22.01:0,22,108	0/0:4,0:6:3.73:0,4,11	1/1:5,17:18:44.91:450,45,0	1/1:1,3:4:3.01:32,3,0	1/1:3,13:15:39.09:408,39,0	1/1:5,6:10:5.93:49,6,0	1/1:2,4:6:18.01:179,18,0	1/1:4,5:9:21:198,21,0	1/1:2,6:8:18.05:192,18,0	1/1:4,7:10:24.05:249,24,0	1/1:2,4:6:15.01:149,15,0	1/1:4,12:18:32.75:316,33,0	0/0:4,0:4:11.99:0,12,99	1/1:5,6:9:23.89:227,24,0	1/1:4,14:17:33.08:352,33,0	1/1:3,4:7:12.03:128,12,0	0/0:4,0:5:4.06:0,4,12	0/0:5,0:9:9.12:0,9,28	0/1:3,0:3:0:0,0,0	1/1:4,3:7:15.03:152,15,0	1/1:1,7:8:18.05:192,18,0	0/1:6,7:13:25.13:157,0,25	1/1:1,5:4:5.95:42,6,0
chr10	60587947	.	C	CT	261.98	PASS	AB=1.000;AC=5;AF=0.093;AN=54;BaseQRankSum=-4.934;DP=287;FS=0.000;HRun=6;HaplotypeScore=67.9400;InbreedingCoeff=0.2052;MQ=65.43;MQ0=11;MQRankSum=-3.102;QD=7.94;ReadPosRankSum=-2.317;VQSLOD=-0.3232;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:7:11.02:0,11,53	0/0:3,0:3:5.76:0,6,37	0/0:35,2:8:17.54:0,18,123	0/0:41,0:13:9.39:0,9,67	0/0:11,0:11:23.13:0,23,126	0/0:4,0:4:7.94:0,8,44	0/0:3,0:3:8.65:0,9,49	1/1:7,11:15:30.93:341,31,0	0/0:6,0:6:11.55:0,12,61	0/0:14,0:12:18.87:0,19,103	0/0:7,0:6:2.87:0,3,15	0/1:5,0:5:15.88:16,0,23	0/0:8,0:8:20.37:0,20,118	0/1:5,0:5:12.84:13,0,43	0/0:8,0:7:17.11:0,17,85	0/0:7,0:7:20.21:0,20,115	0/0:15,0:15:32.15:0,32,194	0/1:5,0:5:8.10:8,0,41	0/0:9,0:7:17.47:0,17,100	0/0:15,0:14:32.17:0,32,206	0/0:3,0:3:5.79:0,6,32	0/0:3,0:3:2.84:0,3,14	0/0:9,0:7:12.17:0,12,74	./.	0/0:9,0:9:21.18:0,21,122	0/0:6,0:6:8.72:0,9,51	0/0:17,0:17:37.40:0,37,213	0/0:9,0:7:8.81:0,9,56
chr10	60587967	.	CT	C	1353.83	PASS	AB=0.868;AC=37;AF=0.712;AN=52;BaseQRankSum=-1.698;DP=313;FS=6.428;HRun=10;HaplotypeScore=60.9552;InbreedingCoeff=0.5272;MQ=68.89;MQ0=23;MQRankSum=0.670;QD=8.16;ReadPosRankSum=4.436;VQSLOD=1.5817;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:4,0:4:2.99:16,0,3	1/1:3,0:4:8.46:53,8,0	0/0:62,0:16:3.63:0,4,84	0/0:55,0:14:10.09:0,10,54	1/1:10,1:10:14.31:137,14,0	0/0:2,0:3:8.67:0,9,48	0/0:1,0:3:3.35:0,3,15	0/0:10,0:13:16.87:0,17,103	1/1:5,1:6:11.41:74,11,0	1/1:8,3:9:14.91:86,15,0	1/1:7,0:5:2.84:14,3,0	1/1:1,1:3:1.90:20,2,0	1/1:6,1:6:13.62:82,14,0	0/1:4,1:4:2.88:42,0,3	1/1:7,1:7:8.94:65,9,0	1/1:9,1:9:16.92:107,17,0	1/1:15,1:13:20.34:136,20,0	1/1:3,1:4:8.92:69,9,0	0/1:7,3:8:11.76:49,0,12	1/1:10,2:10:10.82:62,11,0	1/1:2,0:2:5.22:33,5,0	./.	0/0:8,0:7:7.58:0,8,27	./.	1/1:6,3:9:22.66:160,23,0	1/1:5,2:7:17.54:118,18,0	1/1:16,1:16:20.83:144,21,0	1/1:10,2:8:5.58:49,6,0
chr10	60630222	.	CT	C	246.63	PASS	AC=8;AF=0.182;AN=44;BaseQRankSum=3.247;DP=430;FS=0.000;HRun=3;HaplotypeScore=15.9681;InbreedingCoeff=0.5497;MQ=14.58;MQ0=283;MQRankSum=-0.563;QD=3.74;ReadPosRankSum=0.615;VQSLOD=-0.0140;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:11:21.07:0,21,302	0/0:4,0:1:3.01:0,3,43	./.	./.	0/0:13,0:6:3.01:0,3,43	1/1:11,5:5:15.05:186,15,0	1/1:18,3:3:9.03:111,9,0	0/0:22,0:6:18.06:0,18,259	0/0:28,0:7:12.04:0,12,172	0/0:12,0:2:3.01:0,3,43	0/0:12,0:5:6.02:0,6,86	0/0:25,0:9:15.05:0,15,215	0/0:18,0:6:15.01:0,15,192	0/0:21,0:5:6.02:0,6,86	0/0:9,0:3:5.91:0,6,86	0/0:16,0:6:12.04:0,12,172	0/0:20,0:5:12.04:0,12,172	0/0:22,0:4:12.04:0,12,172	0/0:14,0:4:12.04:0,12,173	./.	0/0:19,0:2:3.01:0,3,43	./.	1/1:5,4:2:3.01:37,3,0	1/1:17,3:3:3.01:37,3,0	./.	0/0:18,0:4:6.02:0,6,86	0/0:23,0:5:9.03:0,9,129	./.
chr10	60632177	.	GAATCTGAACTACAGAGGCAT	G	853.42	PASS	AB=0.751;AC=2;AF=0.037;AN=54;BaseQRankSum=4.481;DP=540;FS=17.370;HRun=0;HaplotypeScore=185.6464;InbreedingCoeff=-0.0494;MQ=43.83;MQ0=76;MQRankSum=-3.288;QD=21.34;ReadPosRankSum=-1.010;VQSLOD=1.6361;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:13:18.06:0,18,1668	0/0:7,0:7:18.02:0,18,1341	0/0:23,0:2:3.01:0,3,167	./.	0/0:28,0:28:62.95:0,63,5920	0/0:25,2:23:45.15:0,45,3467	0/0:13,0:11:15.05:0,15,1432	0/0:31,0:25:72.25:0,72,6190	0/0:29,0:26:54.18:0,54,4521	0/0:24,0:22:66.23:0,66,5547	0/0:17,0:17:38.81:0,39,2880	0/0:17,0:17:39.13:0,39,3486	0/0:20,0:16:36.12:0,36,3060	0/0:20,0:16:27.09:0,27,2535	0/0:17,0:16:33.11:0,33,2859	0/0:25,0:23:27.09:0,27,2433	0/0:14,0:12:24.08:0,24,2201	0/0:5,0:4:12.04:0,12,633	0/0:19,0:8:20.62:0,21,1898	0/0:23,0:23:63.22:0,63,5338	0/0:17,0:10:21.07:0,21,2005	0/1:9,5:12:99:262,0,1916	0/1:18,8:23:99:680,0,3685	0/0:9,2:6:12.04:0,12,896	0/0:11,0:11:27.09:0,27,2295	0/0:25,0:20:57.20:0,57,5401	0/0:27,0:25:51.05:0,51,4281	0/0:16,0:11:27.09:0,27,2579
chr10	60637487	.	T	TGTG	35481.08	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-8.658;DP=726;FS=4.315;HRun=0;HaplotypeScore=93.3086;InbreedingCoeff=0.9955;MQ=71.57;MQ0=1;MQRankSum=-7.442;QD=52.72;ReadPosRankSum=7.026;VQSLOD=6.8474;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,36:41:95.93:2211,96,0	1/1:0,7:7:21.07:484,21,0	0/0:35,0:35:93.31:0,93,1540	0/0:18,0:18:54.15:0,54,874	1/1:2,11:13:21.07:484,21,0	1/1:2,19:19:57.20:1314,57,0	1/1:3,15:17:36.12:798,36,0	1/1:12,18:22:51.17:1150,51,0	1/1:1,27:26:69.24:1589,69,0	1/1:2,22:21:60.21:1359,60,0	1/1:2,27:25:60.21:1383,60,0	1/1:2,27:31:75.26:1719,75,0	1/1:3,24:27:63.17:1386,63,0	1/1:3,26:28:75.21:1678,75,0	1/1:3,33:36:90.31:2062,90,0	1/1:4,26:29:72.20:1599,72,0	1/1:5,24:29:63.22:1452,63,0	1/1:0,13:14:33.11:761,33,0	1/1:2,17:16:45.14:926,45,0	1/1:1,35:33:90.27:2025,90,0	1/1:1,35:37:93.32:2145,93,0	1/1:2,25:27:65.96:1521,66,0	1/1:2,20:22:54.19:1241,54,0	1/1:2,22:24:44.90:1038,45,0	1/1:1,16:18:42.14:968,42,0	1/1:4,22:23:60.21:1353,60,0	1/1:1,32:32:90.31:2073,90,0	1/1:0,11:11:33.11:761,33,0
chr10	60638299	.	AC	A	2734.38	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=8.898;DP=579;FS=3.571;HRun=8;HaplotypeScore=57.1860;InbreedingCoeff=0.9972;MQ=73.41;MQ0=7;MQRankSum=-0.482;QD=19.96;ReadPosRankSum=-0.638;VQSLOD=3.4319;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,105,1259	0/0:8,0:8:21.04:0,21,230	0/0:27,0:23:33.12:0,33,614	0/0:25,0:24:50.41:0,50,613	0/0:19,0:19:44.79:0,45,526	1/1:7,28:33:57.09:550,57,0	1/1:2,30:31:75.12:724,75,0	1/1:5,19:24:54.08:520,54,0	0/0:25,0:25:66.19:0,66,787	0/0:16,0:16:45.14:0,45,543	0/0:18,0:18:42.13:0,42,506	0/0:18,0:17:48.13:0,48,568	0/0:15,0:14:39.12:0,39,470	0/0:13,0:13:39.12:0,39,468	0/0:16,0:16:45.11:0,45,520	0/0:17,0:17:51.16:0,51,616	0/0:22,0:22:54.17:0,54,652	0/0:18,0:18:42.60:0,43,505	0/0:20,0:20:42.13:0,42,507	0/0:15,0:14:36.11:0,36,434	0/0:32,0:32:84.26:0,84,1013	1/1:4,17:19:54.09:521,54,0	1/1:3,10:13:33.05:318,33,0	1/1:2,10:12:30.05:290,30,0	0/0:18,0:18:54.14:0,54,624	0/0:24,0:24:63.13:0,63,742	0/0:29,0:29:49.32:0,49,845	0/0:6,0:6:18.04:0,18,206
chr10	60638405	.	A	AG	1015.16	PASS	AB=0.766;AC=5;AF=0.089;AN=56;BaseQRankSum=4.376;DP=786;FS=58.073;HRun=0;HaplotypeScore=73.6327;InbreedingCoeff=-0.1014;MQ=57.76;MQ0=16;MQRankSum=-6.035;QD=6.77;ReadPosRankSum=1.530;VQSLOD=1.3987;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,111,1516	0/0:13,0:13:36.12:0,36,498	0/0:25,0:13:39.11:0,39,524	0/0:34,0:31:90.13:0,90,1136	0/0:33,0:33:96.28:0,96,1301	0/1:29,11:35:99:178,0,1009	0/1:24,6:29:99:128,0,879	0/0:32,0:31:87.28:0,87,1188	0/0:25,0:25:75.24:0,75,1033	0/0:32,0:32:96.31:0,96,1326	0/0:23,0:23:66.17:0,66,899	0/1:20,9:27:99:248,0,719	0/1:20,10:26:99:249,0,716	0/0:31,0:31:90.30:0,90,1252	0/0:19,0:19:54.16:0,54,725	0/0:30,0:30:90.27:0,90,1224	0/0:25,1:26:31.49:0,31,965	0/0:27,0:27:81.25:0,81,1113	0/0:39,0:36:99:0,102,1405	0/0:29,0:29:87.27:0,87,1181	0/0:30,0:29:84.28:0,84,1174	0/0:30,2:32:46.60:0,47,1211	0/0:18,4:19:7.42:0,7,610	0/1:12,9:21:99:330,0,369	0/0:25,0:25:69.22:0,69,949	0/0:35,0:35:99:0,99,1351	0/0:25,0:25:75.24:0,75,1033	0/0:11,1:11:33.11:0,33,461
chr10	60638814	.	G	GC	223.54	PASS	AB=0.769;AC=2;AF=0.036;AN=56;BaseQRankSum=7.192;DP=736;FS=52.194;HRun=0;HaplotypeScore=77.4717;InbreedingCoeff=-0.0434;MQ=60.59;MQ0=11;MQRankSum=-6.289;QD=4.06;ReadPosRankSum=-2.044;VQSLOD=1.0689;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:43:99:0,120,1650	0/0:19,0:19:57.17:0,57,775	0/0:31,0:16:37.70:0,38,521	0/0:24,0:15:41.79:0,42,501	0/0:21,0:21:54.18:0,54,755	0/0:14,0:14:42.14:0,42,584	0/0:33,2:32:57.57:0,58,1253	0/0:30,0:27:78.24:0,78,1068	0/0:31,0:31:90.30:0,90,1258	0/0:27,0:27:81.26:0,81,1113	0/0:28,0:28:72.24:0,72,999	0/0:26,3:28:9.68:0,10,998	0/0:28,3:30:5.32:0,5,1008	0/0:24,0:24:72.24:0,72,1006	0/0:32,0:32:96.32:0,96,1339	0/0:35,0:35:99:0,102,1407	0/0:24,0:24:72.24:0,72,996	0/0:20,0:20:57.19:0,57,789	0/0:16,0:15:45.15:0,45,625	0/0:25,0:25:69.23:0,69,959	0/0:26,0:26:75.25:0,75,1045	0/1:25,8:32:99:135,0,872	0/1:14,8:20:99:177,0,471	0/0:21,2:22:63.21:0,63,877	0/0:30,0:30:87.27:0,87,1196	0/0:24,0:24:72.24:0,72,1003	0/0:29,0:27:87.27:0,87,1190	0/0:9,0:9:27.05:0,27,325
chr10	60642797	.	GAA	G	1408.36	PASS	AB=1.000;AC=38;AF=0.792;AN=48;BaseQRankSum=-4.982;DP=427;FS=0.000;HRun=3;HaplotypeScore=58.5075;InbreedingCoeff=0.3908;MQ=53.20;MQ0=110;MQRankSum=-2.636;QD=4.68;ReadPosRankSum=2.513;VQSLOD=-0.7298;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:16:0.47:1,0,0	1/1:6,0:6:5.88:36,6,0	0/0:29,0:6:0.86:0,1,49	0/0:39,0:15:11:0,11,94	./.	1/1:23,0:21:1.96:16,2,0	./.	1/1:19,0:12:25.39:200,25,0	1/1:14,0:14:5.90:37,6,0	1/1:14,0:10:27.41:224,27,0	./.	0/1:10,0:9:0:0,0,0	1/1:16,0:14:5.49:81,5,0	0/1:14,0:14:10.77:12,0,11	1/1:19,0:18:2.72:17,3,0	1/1:9,0:9:5.68:37,6,0	1/1:17,0:10:9.50:52,10,0	1/1:10,0:8:17.74:117,18,0	1/1:13,0:10:29.84:230,30,0	1/1:16,0:13:2.62:18,3,0	1/1:15,0:7:0.47:1,0,0	0/0:8,0:6:0.41:0,0,1	./.	1/1:16,1:11:2.50:9,2,0	0/0:9,0:6:0.89:0,1,2	1/1:12,0:8:23.86:184,24,0	1/1:17,0:16:28.64:190,29,0	1/1:16,0:3:8.89:60,9,0
chr10	60646430	.	G	GGTGTGTGTGTGTGT	5756.15	PASS	AB=0.988;AC=49;AF=0.875;AN=56;BaseQRankSum=-2.023;DP=656;FS=0.000;HRun=0;HaplotypeScore=208.0729;InbreedingCoeff=0.2000;MQ=50.47;MQ0=21;MQRankSum=0.910;QD=10.03;ReadPosRankSum=0.866;VQSLOD=3.6521;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:24:18.30:126,0,18	1/1:7,0:6:3.01:35,3,0	0/0:41,0:20:2.84:0,3,14	0/0:41,0:18:3:0,3,35	0/1:33,0:32:7.56:101,0,8	1/1:23,0:18:10.81:134,11,0	1/1:14,0:15:3.01:37,3,0	1/1:24,0:18:5.92:44,6,0	1/1:25,0:19:5.83:67,6,0	1/1:24,0:23:18.02:431,18,0	1/1:20,0:20:2.64:130,3,0	0/1:19,0:13:0:0,0,0	1/1:14,0:12:8.23:384,8,0	1/1:19,0:14:3.01:130,3,0	1/1:22,0:22:3.01:129,3,0	1/1:19,0:17:3:25,3,0	1/1:20,0:19:14.95:207,15,0	1/1:12,0:11:13.41:588,13,0	1/1:16,0:13:12.04:340,12,0	1/1:29,0:26:5.65:254,6,0	1/1:38,0:30:14.95:147,15,0	1/1:24,0:20:4.96:63,5,0	1/1:23,0:19:12.46:105,12,0	1/1:28,0:24:15.36:215,15,0	1/1:22,0:18:18.06:620,18,0	1/1:23,6:27:38.67:939,39,0	1/1:18,0:15:6.02:200,6,0	1/1:15,0:9:17.95:303,18,0
chr10	60646451	.	G	GTC	2709.08	PASS	AB=0.861;AC=26;AF=0.464;AN=56;BaseQRankSum=-1.947;DP=818;FS=38.414;HRun=0;HaplotypeScore=136.0421;InbreedingCoeff=-0.6160;MQ=43.94;MQ0=42;MQRankSum=0.312;QD=3.99;ReadPosRankSum=-0.582;VQSLOD=1.0816;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:21,14:32:7.11:7,0,254	0/1:8,0:7:5.81:83,0,6	0/0:41,0:9:14.16:0,14,167	0/0:59,0:17:24.42:0,24,251	0/1:35,1:33:99:173,0,177	0/1:29,0:23:99:125,0,272	0/1:29,0:23:56.96:198,0,57	0/1:35,0:24:93.28:286,0,93	0/1:31,0:25:69.02:69,0,144	0/1:9,0:35:99:216,0,178	0/1:6,0:27:35.43:35,0,40	0/0:4,0:11:5.99:0,6,49	1/1:3,0:14:2.54:86,3,0	1/1:6,0:15:3:28,3,0	0/1:5,0:23:19.81:20,0,39	0/0:5,1:20:5.78:0,6,50	0/1:23,0:20:51.29:152,0,51	0/1:19,1:18:84.33:172,0,84	0/1:18,0:13:99:109,0,106	0/1:13,0:42:80.84:81,0,100	0/1:45,0:36:99:168,0,195	0/1:25,0:21:83.74:84,0,231	0/1:28,0:24:99:140,0,142	0/1:29,0:25:99:106,0,193	0/1:5,1:29:5.04:153,0,5	0/1:35,0:29:99:228,0,259	0/1:6,0:20:19.70:20,0,60	0/1:21,0:15:99:123,0,137
chr10	60646923	.	A	AT	9774.79	PASS	AB=0.663;AC=50;AF=0.893;AN=56;BaseQRankSum=-2.697;DP=473;FS=10.052;HRun=7;HaplotypeScore=94.8406;InbreedingCoeff=0.4431;MQ=53.23;MQ0=14;MQRankSum=1.667;QD=21.39;ReadPosRankSum=1.468;VQSLOD=4.0298;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,24:26:34.17:679,34,0	1/1:1,8:9:24.07:290,24,0	0/0:10,0:7:6:0,6,54	0/0:6,0:5:5.92:0,6,51	1/1:7,22:27:39.12:471,39,0	1/1:4,0:19:20.16:210,20,0	1/1:2,0:7:11.47:58,11,0	1/1:7,21:21:48.15:578,48,0	1/1:2,8:8:18.06:217,18,0	1/1:6,14:17:16.16:477,16,0	1/1:3,14:15:33.99:400,34,0	1/1:6,14:16:13.18:442,13,0	0/1:4,2:3:19.92:63,0,20	1/1:3,10:12:27.08:326,27,0	1/1:7,15:20:19.20:514,19,0	0/1:4,11:14:18.77:360,0,19	1/1:0,27:26:60.18:725,60,0	1/1:8,23:29:25.19:587,25,0	1/1:5,16:18:42.12:496,42,0	1/1:3,19:22:51.09:600,51,0	1/1:1,5:6:15.05:181,15,0	1/1:0,0:2:2.88:15,3,0	1/1:2,0:13:22.89:115,23,0	1/1:0,0:9:17.34:93,17,0	1/1:5,14:19:36.11:435,36,0	1/1:4,19:21:54.15:639,54,0	1/1:8,26:32:37.24:732,37,0	1/1:0,2:2:6.02:72,6,0
chr10	60647839	.	ATT	A	12961.11	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-5.434;DP=557;FS=18.324;HRun=11;HaplotypeScore=74.0244;InbreedingCoeff=0.9270;MQ=68.32;MQ0=5;MQRankSum=-2.948;QD=24.23;ReadPosRankSum=3.762;VQSLOD=2.8411;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,27:28:72.18:766,72,0	1/1:4,17:21:42.08:447,42,0	0/0:8,0:7:6.02:0,6,89	0/0:12,0:14:15.19:0,15,235	1/1:2,20:21:48.02:499,48,0	1/1:2,13:14:33.07:350,33,0	1/1:0,13:13:36.09:383,36,0	1/1:3,25:28:75.18:798,75,0	1/1:2,9:12:29.80:299,30,0	1/1:8,22:30:66.15:702,66,0	1/1:1,22:23:48.11:511,48,0	1/1:2,17:19:48.10:511,48,0	1/1:5,8:12:21.04:222,21,0	1/1:4,9:15:29.52:279,30,0	1/1:5,12:17:33.06:351,33,0	1/1:1,11:12:33.08:351,33,0	1/1:3,23:26:60.14:639,60,0	1/1:2,26:27:75.18:798,75,0	1/1:6,20:26:35.84:592,36,0	1/1:4,15:20:44.80:459,45,0	1/1:1,20:21:54.13:575,54,0	1/1:2,15:18:45.10:479,45,0	1/1:2,12:14:33.08:351,33,0	1/1:3,11:14:30.07:319,30,0	1/1:10,27:36:75.13:798,75,0	1/1:4,25:28:72.15:766,72,0	1/1:4,19:23:50.85:523,51,0	1/1:2,6:8:18.04:192,18,0
chr10	60648634	.	GGT	G	532.34	PASS	AB=0.951;AC=14;AF=0.280;AN=50;BaseQRankSum=3.481;DP=614;FS=2.785;HRun=0;HaplotypeScore=47.0827;InbreedingCoeff=0.2362;MQ=42.87;MQ0=68;MQRankSum=1.355;QD=2.45;ReadPosRankSum=0.655;VQSLOD=1.4419;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:26:2.97:0,3,20	0/1:9,1:9:23.68:24,0,80	./.	./.	0/0:12,0:10:3:0,3,29	1/1:9,5:11:9.02:98,9,0	1/1:16,6:20:18.05:196,18,0	./.	0/0:23,0:16:6.01:0,6,68	0/0:21,0:20:21.06:0,21,270	0/0:18,0:15:18.06:0,18,258	0/0:34,0:27:26.83:0,27,357	0/0:22,0:18:9.01:0,9,113	0/1:21,1:15:23.69:24,0,80	0/1:28,1:23:37.98:38,0,267	0/0:19,0:15:27.07:0,27,378	0/0:22,0:16:15.03:0,15,203	0/0:19,0:17:12.03:0,12,160	0/0:15,0:7:8.94:0,9,69	0/0:10,0:10:5.89:0,6,52	0/1:29,1:24:14.73:15,0,127	0/1:21,1:15:35.58:36,0,40	1/1:9,4:8:9.02:98,9,0	1/1:19,0:27:28.41:140,28,0	0/0:19,0:17:9.03:0,9,132	0/1:15,1:14:23.72:24,0,58	0/0:15,0:11:3:0,3,26	0/0:10,0:9:6.02:0,6,73
chr10	60649527	.	CTGTGTG	C	3436.05	PASS	AC=34;AF=0.680;AN=50;BaseQRankSum=-1.810;DP=473;FS=21.382;HRun=0;HaplotypeScore=70.0989;InbreedingCoeff=0.6695;MQ=37.88;MQ0=146;MQRankSum=-4.442;QD=13.32;ReadPosRankSum=1.237;VQSLOD=0.6154;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:6:0.89:2,1,0	1/1:8,2:8:3.01:61,3,0	0/0:26,0:5:3.90:0,4,42	./.	1/1:21,7:25:9.92:178,10,0	0/0:13,0:9:5.19:0,5,74	0/0:10,0:12:24.08:0,24,307	0/0:17,0:5:6.02:0,6,195	1/1:6,10:13:18.06:349,18,0	1/1:17,1:17:2.88:61,3,0	1/1:9,9:14:9.03:184,9,0	1/1:9,12:20:27.98:554,28,0	1/1:8,6:11:12.04:246,12,0	1/1:11,7:14:18.06:368,18,0	1/1:10,4:12:15.05:288,15,0	1/1:3,3:5:6.91:124,7,0	1/1:6,5:10:5.24:121,5,0	1/1:4,2:4:6.02:123,6,0	./.	1/1:12,5:10:12.04:246,12,0	./.	0/0:13,0:14:6.02:0,6,77	0/0:14,0:16:9.03:0,9,115	0/0:4,0:13:29.31:0,29,410	1/1:6,11:13:18.95:331,19,0	0/0:14,0:18:3.78:0,4,59	1/1:15,4:14:9.03:184,9,0	1/1:4,0:3:2.88:15,3,0
chr10	60651271	.	T	TTATTATTA	1043.52	PASS	AC=2;AF=0.037;AN=54;BaseQRankSum=-2.173;DP=451;FS=18.941;HRun=0;HaplotypeScore=100.5499;InbreedingCoeff=0.8127;MQ=55.21;MQ0=29;MQRankSum=-5.169;QD=43.48;ReadPosRankSum=-3.278;VQSLOD=1.5207;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:72.21:0,72,1849	0/0:9,0:9:24.08:0,24,658	0/0:5,0:1:2.98:0,3,21	./.	0/0:25,0:24:72.23:0,72,1964	0/0:12,0:12:33.11:0,33,966	0/0:6,0:5:15.05:0,15,418	1/1:15,6:13:33.11:1138,33,0	0/0:14,0:14:42.14:0,42,1188	0/0:24,0:24:72.25:0,72,1935	0/0:20,0:20:60.21:0,60,1696	0/0:17,0:17:42.13:0,42,1063	0/0:16,0:16:48.16:0,48,1298	0/0:16,0:16:42.14:0,42,1175	0/0:17,0:17:51.18:0,51,1478	0/0:14,0:14:42.14:0,42,1142	0/0:23,0:23:63.22:0,63,1782	0/0:16,0:15:45.15:0,45,1277	0/0:22,0:14:39.12:0,39,1035	0/0:17,0:17:51.17:0,51,1356	0/0:15,0:15:42.13:0,42,1127	0/0:6,0:6:15.05:0,15,436	0/0:8,0:8:21.06:0,21,552	0/0:8,0:8:18.05:0,18,398	0/0:25,0:25:75.26:0,75,2010	0/0:30,0:30:87.27:0,87,2423	0/0:24,0:24:72.25:0,72,2038	0/0:8,0:6:18.06:0,18,527
chr10	60651692	.	CAA	C	5425.14	PASS	AB=0.647;AC=33;AF=0.589;AN=56;BaseQRankSum=-3.384;DP=401;FS=4.655;HRun=11;HaplotypeScore=79.9341;InbreedingCoeff=0.3290;MQ=62.58;MQ0=6;MQRankSum=1.494;QD=18.52;ReadPosRankSum=7.411;VQSLOD=3.5964;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,20:20:39.07:415,39,0	0/1:3,4:7:30.85:113,0,31	0/0:16,0:8:11.50:0,11,129	0/0:23,0:15:5.87:0,6,278	1/1:8,16:25:44.39:462,44,0	0/0:15,0:15:39.07:0,39,386	0/0:15,0:15:39.08:0,39,416	0/0:17,0:17:14.53:0,15,52	1/1:2,7:8:12.03:128,12,0	0/1:4,10:14:13.12:279,0,13	1/1:2,15:15:11.42:340,11,0	1/1:1,13:14:32.99:336,33,0	1/1:1,8:9:17.96:176,18,0	1/1:1,9:10:20.97:208,21,0	1/1:0,11:11:32.92:321,33,0	1/1:3,10:13:27.05:287,27,0	0/1:7,21:28:37.71:512,0,38	0/1:5,13:17:15.02:309,0,15	1/1:1,5:6:12.02:121,12,0	0/1:3,9:11:22.17:184,0,22	0/1:2,1:3:22.95:23,0,57	0/0:8,0:8:12.04:0,12,155	0/1:10,0:11:1.91:2,0,252	0/0:11,0:11:24.06:0,24,255	0/1:5,9:14:99:251,0,102	0/1:5,8:14:34.24:194,0,34	1/1:2,22:24:56.86:587,57,0	1/1:1,9:9:17.91:175,18,0
chr10	60651744	.	T	TA	1643.74	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=-1.896;DP=407;FS=3.854;HRun=7;HaplotypeScore=59.1545;InbreedingCoeff=0.8720;MQ=60.60;MQ0=8;MQRankSum=3.324;QD=22.83;ReadPosRankSum=1.431;VQSLOD=3.8616;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:30:78.12:0,78,750	0/0:1,0:3:5:0,5,35	0/1:14,0:9:4.03:4,0,125	0/0:12,0:8:21.03:0,21,203	0/0:15,0:16:36.04:0,36,342	1/1:2,11:13:33.10:399,33,0	1/1:2,15:17:39.12:471,39,0	0/0:22,0:21:57.09:0,57,550	0/0:14,0:13:33.05:0,33,318	0/0:13,0:13:36.06:0,36,348	0/0:14,0:12:36.06:0,36,347	0/0:11,0:11:24.04:0,24,231	0/0:7,0:7:15.02:0,15,145	0/0:11,0:11:27.03:0,27,255	0/0:15,0:15:39.06:0,39,376	0/0:12,0:12:27.04:0,27,260	0/0:26,0:26:52.61:0,53,497	0/0:13,0:13:26.96:0,27,249	0/0:20,0:20:54.07:0,54,516	0/0:10,0:9:27.04:0,27,261	0/0:13,0:15:40.13:0,40,359	1/1:0,3:3:9.03:109,9,0	1/1:1,11:12:33.10:399,33,0	1/1:0,13:13:36.11:435,36,0	0/0:17,0:20:48.17:0,48,423	0/0:16,0:15:45.07:0,45,433	0/0:19,0:18:42.05:0,42,400	0/0:14,0:13:27.04:0,27,260
chr10	60653653	.	TA	T	629.51	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.751;DP=597;FS=6.439;HRun=8;HaplotypeScore=56.7727;InbreedingCoeff=0.9525;MQ=60.90;MQ0=31;MQRankSum=1.789;QD=22.48;ReadPosRankSum=-3.018;VQSLOD=2.8732;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:57.17:0,57,689	0/0:11,0:11:30.09:0,30,362	0/0:12,0:12:30.05:0,30,324	0/0:15,0:12:9.99:0,10,163	0/0:38,0:38:99:0,108,1292	0/0:34,0:29:75.08:0,75,873	0/0:19,0:16:48.15:0,48,579	1/1:3,25:27:75.12:724,75,0	0/0:18,0:18:48.13:0,48,568	0/0:23,0:23:57.17:0,57,689	0/0:25,0:25:72.22:0,72,869	0/0:24,0:23:63.18:0,63,748	0/0:25,0:20:57.16:0,57,676	0/0:12,0:12:30.09:0,30,362	0/0:17,0:17:48.15:0,48,578	0/0:10,0:10:30.09:0,30,362	0/0:18,0:17:48.15:0,48,580	0/0:14,0:14:39.04:0,39,438	0/0:23,0:22:57.17:0,57,688	0/0:28,0:28:69.21:0,69,833	0/0:17,0:17:42.13:0,42,507	0/0:25,0:21:57.04:0,57,667	0/0:27,0:22:63.19:0,63,761	0/0:19,0:19:57.17:0,57,688	0/0:28,0:28:84.26:0,84,1015	0/0:15,0:15:45.14:0,45,544	0/0:35,0:35:93.29:0,93,1124	0/0:12,0:12:33.10:0,33,399
chr10	60657060	.	T	TA	11485.93	PASS	AB=0.565;AC=39;AF=0.696;AN=56;BaseQRankSum=-8.900;DP=501;FS=2.485;HRun=6;HaplotypeScore=42.8777;InbreedingCoeff=0.9042;MQ=57.92;MQ0=3;MQRankSum=3.467;QD=29.91;ReadPosRankSum=4.147;VQSLOD=5.1248;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,21:22:48.15:599,48,0	1/1:4,7:11:21.07:263,21,0	0/0:10,0:4:8.56:0,9,64	0/0:3,0:1:2.04:0,2,6	1/1:3,23:25:66.19:814,66,0	0/0:8,0:8:23.99:0,24,231	0/0:12,0:12:36.08:0,36,367	0/0:34,0:34:96.14:0,96,943	1/1:1,14:15:42.13:528,42,0	1/1:5,34:39:99:1214,102,0	1/1:2,35:37:90.08:1091,90,0	1/1:1,18:19:51.16:641,51,0	1/1:2,14:16:33.11:415,33,0	1/1:0,15:14:42.13:526,42,0	1/1:2,12:14:33.11:415,33,0	1/1:4,20:24:60.19:755,60,0	1/1:1,18:18:39.12:491,39,0	0/1:3,10:13:0.51:309,0,1	1/1:0,10:10:27.04:312,27,0	1/1:1,29:30:84.20:1037,84,0	1/1:0,8:7:15.05:189,15,0	0/0:14,0:14:36.07:0,36,363	0/0:24,0:24:66.15:0,66,673	0/0:12,0:12:30.07:0,30,306	1/1:4,15:19:39.12:491,39,0	1/1:1,14:15:42.13:528,42,0	1/1:1,22:22:57.18:715,57,0	1/1:0,6:6:12.04:151,12,0
chr10	60659734	.	T	TG	5943.81	PASS	AB=0.722;AC=39;AF=0.696;AN=56;BaseQRankSum=8.438;DP=405;FS=0.485;HRun=8;HaplotypeScore=60.6232;InbreedingCoeff=0.7431;MQ=73.03;MQ0=4;MQRankSum=0.192;QD=20.57;ReadPosRankSum=2.672;VQSLOD=4.7869;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,20:21:36.11:415,36,0	1/1:0,3:3:6.02:69,6,0	0/0:25,0:19:10.40:0,10,175	0/1:15,0:13:20.52:21,0,89	1/1:3,15:17:33.10:381,33,0	0/0:21,0:17:45.02:0,45,412	0/0:17,0:15:27.48:0,27,298	0/0:11,0:11:23.99:0,24,217	1/1:3,9:11:15.04:173,15,0	1/1:4,11:13:30.09:346,30,0	1/1:4,13:15:8.66:353,9,0	1/1:1,12:12:33.10:381,33,0	1/1:3,11:14:24.07:277,24,0	1/1:2,3:4:6.02:69,6,0	1/1:2,8:10:15.04:173,15,0	1/1:1,13:14:27.06:301,27,0	1/1:5,15:20:39.12:450,39,0	1/1:0,9:9:21.06:242,21,0	0/1:3,6:9:6.41:187,0,6	0/1:3,10:12:0.37:250,0,0	1/1:1,10:11:24.07:277,24,0	0/0:15,0:13:33.01:0,33,302	0/0:11,0:11:27.49:0,27,248	0/0:15,0:14:33:0,33,302	1/1:0,19:18:48.14:554,48,0	1/1:2,13:13:36.11:415,36,0	1/1:3,19:17:33.10:379,33,0	1/1:2,6:8:21.04:231,21,0
chr10	60660039	.	G	GA	63.25	PASS	AB=0.667;AC=9;AF=0.643;AN=14;BaseQRankSum=-0.322;DP=14;FS=0.000;HRun=0;HaplotypeScore=22.9583;MQ=137.15;MQ0=0;MQRankSum=-1.221;QD=9.04;ReadPosRankSum=-1.221;VQSLOD=2.8460;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/1:1,0:2:10.59:11,0,35	0/0:2,0:2:4.23:0,4,25	./.	./.	./.	1/1:0,1:1:3:25,3,0	./.	0/0:0,1:1:0.47:0,0,1	1/1:2,0:1:3.01:47,3,0	1/1:0,1:1:2.74:12,3,0	./.	./.	./.	./.	./.	./.	./.	1/1:1,0:1:3.01:47,3,0	./.	./.	./.	./.	./.	./.	./.	./.
chr10	60660118	.	ACCC	A	1414.46	PASS	AC=42;AF=0.840;AN=50;BaseQRankSum=-0.724;DP=212;FS=0.000;HRun=13;HaplotypeScore=55.1207;InbreedingCoeff=0.4071;MQ=85.86;MQ0=23;MQRankSum=-4.353;QD=10.64;ReadPosRankSum=2.734;VQSLOD=-0.6269;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,6:5:5.95:56,6,0	1/1:1,2:1:3.01:36,3,0	0/0:35,0:15:24:0,24,288	0/0:30,0:16:7.99:0,8,128	1/1:0,10:7:9.01:109,9,0	1/1:0,0:1:2.94:18,3,0	1/1:0,0:3:5.88:36,6,0	1/1:1,0:4:8.75:51,9,0	./.	1/1:0,4:2:6.02:73,6,0	1/1:0,7:6:12.04:143,12,0	./.	1/1:0,5:1:3.01:36,3,0	1/1:0,5:3:9.03:109,9,0	1/1:0,3:1:3.01:30,3,0	./.	1/1:1,4:3:6.01:73,6,0	0/0:1,1:1:0:0,0,0	0/0:1,2:1:0:0,0,0	1/1:0,9:5:11.95:127,12,0	1/1:0,5:5:11.91:96,12,0	1/1:0,0:6:14.71:90,15,0	1/1:2,0:6:11.77:72,12,0	1/1:0,0:5:2.94:18,3,0	1/1:0,9:7:11.99:129,12,0	1/1:0,9:5:15:155,15,0	1/1:0,3:1:3.01:36,3,0	1/1:0,2:1:3.01:36,3,0
chr10	60660752	.	TA	T	12696.10	PASS	AC=40;AF=0.741;AN=54;BaseQRankSum=7.734;DP=643;FS=5.288;HRun=3;HaplotypeScore=56.2830;InbreedingCoeff=0.9653;MQ=51.96;MQ0=26;MQRankSum=2.076;QD=28.59;ReadPosRankSum=3.771;VQSLOD=4.0013;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,46:45:96.30:1190,96,0	1/1:0,7:7:18.06:223,18,0	./.	0/0:32,0:1:3.01:0,3,32	1/1:0,18:17:36.11:446,36,0	0/0:13,0:13:39.07:0,39,518	0/0:27,0:26:42.13:0,42,587	0/0:30,0:25:66.22:0,66,933	1/1:0,29:29:84.26:1041,84,0	1/1:3,22:25:66.20:804,66,0	1/1:0,18:18:36.11:445,36,0	1/1:1,23:24:66.21:818,66,0	1/1:0,15:15:33.10:409,33,0	1/1:3,17:19:51.16:632,51,0	1/1:0,22:22:57.18:707,57,0	1/1:1,30:30:72.23:893,72,0	1/1:1,28:28:48.15:595,48,0	1/1:1,27:22:45.14:558,45,0	1/1:2,23:22:66.21:817,66,0	1/1:1,20:21:54.17:666,54,0	1/1:0,19:19:42.13:520,42,0	0/0:27,0:26:51.09:0,51,669	0/0:16,0:15:39.12:0,39,544	0/0:22,0:19:51.16:0,51,716	1/1:2,22:23:45.14:558,45,0	1/1:0,16:15:45.14:558,45,0	1/1:0,17:17:42.13:519,42,0	1/1:0,9:9:24.08:297,24,0
chr10	60661878	.	C	CAAA	8529.84	PASS	AB=0.748;AC=39;AF=0.696;AN=56;BaseQRankSum=-9.758;DP=555;FS=2.699;HRun=11;HaplotypeScore=82.6785;InbreedingCoeff=0.7573;MQ=57.26;MQ0=45;MQRankSum=-1.120;QD=21.70;ReadPosRankSum=-0.449;VQSLOD=3.5942;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:3,8:13:16.86:392,0,17	1/1:2,5:6:12.04:226,12,0	0/0:32,0:12:27.33:0,27,255	0/0:19,0:9:14.92:0,15,146	1/1:11,12:27:51.53:718,52,0	0/0:25,0:25:41.85:0,42,179	0/0:11,0:11:18.44:0,18,65	0/0:31,0:30:72.47:0,72,807	1/1:8,9:17:21.05:361,21,0	1/1:10,12:22:49.01:764,49,0	1/1:3,16:22:56.13:802,56,0	1/1:2,3:5:9.01:136,9,0	1/1:5,6:10:12.04:207,12,0	1/1:4,5:8:15:227,15,0	1/1:5,3:11:14.99:198,15,0	1/1:4,3:8:15.01:214,15,0	1/1:6,13:19:21.07:370,21,0	1/1:7,11:15:24.08:451,24,0	0/1:12,8:16:4.92:441,0,5	1/1:7,11:21:42.02:587,42,0	1/1:3,4:10:21.01:295,21,0	0/0:17,0:17:13.19:0,13,101	0/0:23,0:24:44.64:0,45,215	0/1:11,0:11:4.08:4,0,51	1/1:6,12:21:33.06:510,33,0	1/1:7,9:20:42.02:589,42,0	1/1:7,17:26:39.11:652,39,0	1/1:2,8:10:27.03:387,27,0
chr10	60661888	.	A	AC	2505.92	PASS	AB=0.969;AC=11;AF=0.196;AN=56;BaseQRankSum=-11.169;DP=546;FS=3.746;HRun=0;HaplotypeScore=89.0264;InbreedingCoeff=0.8865;MQ=58.54;MQ0=38;MQRankSum=2.453;QD=20.37;ReadPosRankSum=4.177;VQSLOD=5.8473;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:13:30.37:0,30,144	0/0:7,0:6:14.40:0,14,85	0/0:32,0:14:23.85:0,24,313	0/0:22,0:10:17.71:0,18,158	0/0:28,0:22:51.25:0,51,253	1/1:3,22:25:61.33:823,61,0	1/1:0,10:11:24.08:324,24,0	0/1:30,1:31:1.46:135,0,1	0/0:18,0:15:33.59:0,34,206	0/0:28,0:23:47.76:0,48,308	0/0:27,0:23:51.88:0,52,277	0/0:6,0:4:8.68:0,9,47	0/0:8,0:7:10.81:0,11,53	0/0:9,0:8:17.50:0,17,107	0/0:16,0:11:13.33:0,13,64	0/0:14,0:9:16.72:0,17,92	0/0:18,0:16:9.89:0,10,102	0/0:22,0:16:34.82:0,35,171	0/0:24,0:16:42.65:0,43,298	0/0:26,0:20:47.75:0,48,280	0/0:9,0:9:25.90:0,26,154	1/1:1,19:20:39.11:519,39,0	1/1:3,22:25:41.03:631,41,0	1/1:1,9:11:14.06:251,14,0	0/0:27,0:22:38:0,38,195	0/0:23,0:20:39.27:0,39,249	0/0:29,0:25:49.60:0,50,266	0/0:15,0:11:30.97:0,31,167
chr10	60662358	.	A	ATT	367.45	PASS	AC=20;AF=0.526;AN=38;BaseQRankSum=5.500;DP=237;FS=13.981;HRun=0;HaplotypeScore=28.6841;InbreedingCoeff=0.6481;MQ=47.50;MQ0=34;MQRankSum=-0.787;QD=22.97;ReadPosRankSum=-4.436;VQSLOD=1.0847;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:2,0:1:2.97:0,3,20	./.	0/0:25,0:9:24.92:0,25,329	0/0:28,0:8:24.08:0,24,365	1/1:0,2:2:3.01:39,3,0	0/0:27,0:27:66.22:0,66,1048	0/0:26,0:23:51.14:0,51,785	0/0:32,0:27:81.28:0,81,1321	1/1:0,1:1:3.01:56,3,0	1/1:1,0:1:3:25,3,0	1/1:0,1:1:3.01:37,3,0	1/1:0,3:3:9.03:133,9,0	1/1:1,0:1:2.99:23,3,0	./.	1/1:0,2:2:6.02:95,6,0	1/1:0,1:2:3.01:38,3,0	./.	./.	1/1:2,0:1:3:26,3,0	./.	./.	0/0:31,0:29:75.26:0,75,1204	0/0:22,0:20:54.17:0,54,844	0/0:21,0:20:51.17:0,51,832	1/1:1,0:1:3.01:40,3,0	./.	./.	./.
chr10	60663119	.	T	TAA	9855.38	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-7.644;DP=439;FS=3.159;HRun=10;HaplotypeScore=60.7982;InbreedingCoeff=0.9022;MQ=60.46;MQ0=7;MQRankSum=-2.485;QD=25.67;ReadPosRankSum=5.006;VQSLOD=4.6426;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,15:20:42.05:554,42,0	1/1:1,6:8:15.05:224,15,0	0/0:15,0:12:11.29:0,11,181	0/0:12,0:10:17.47:0,17,162	1/1:6,28:33:69.16:974,69,0	1/1:2,1:16:30.05:286,30,0	1/1:2,1:6:9.01:86,9,0	0/0:28,0:28:47.70:0,48,191	1/1:1,10:11:24.08:354,24,0	1/1:7,13:20:39.12:548,39,0	1/1:5,18:23:51.13:728,51,0	1/1:5,8:12:24.05:333,24,0	1/1:2,8:10:23.57:322,24,0	1/1:1,10:12:21.07:311,21,0	1/1:0,13:14:36.12:536,36,0	1/1:2,18:20:42.13:627,42,0	1/1:4,5:10:9.03:134,9,0	1/1:0,10:10:27.09:402,27,0	1/1:8,13:21:26.91:454,27,0	1/1:3,14:17:36.04:487,36,0	1/1:1,12:13:27.09:402,27,0	1/1:4,0:8:12.02:118,12,0	1/1:3,1:15:17.95:160,18,0	1/1:3,0:7:9.69:110,10,0	1/1:4,10:13:24.05:334,24,0	1/1:6,12:18:30.05:403,30,0	1/1:1,19:19:48.13:691,48,0	1/1:3,7:11:20.56:277,21,0
chr10	60663129	.	A	AT	1003.91	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-5.514;DP=401;FS=4.293;HRun=0;HaplotypeScore=79.0396;InbreedingCoeff=0.5040;MQ=63.23;MQ0=6;MQRankSum=1.613;QD=34.62;ReadPosRankSum=-3.804;VQSLOD=2.1371;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:33.28:0,33,152	0/0:7,0:7:11.01:0,11,42	0/0:17,0:15:3.51:0,4,287	0/0:10,0:9:2.63:0,3,190	0/0:28,0:27:53.80:0,54,237	0/0:17,0:15:29.76:0,30,133	0/0:6,0:6:6.56:0,7,36	1/1:1,27:29:84.18:1098,84,0	0/0:10,0:10:9.76:0,10,63	0/0:22,0:21:57.40:0,57,368	0/0:18,0:19:27.86:0,28,153	0/0:10,0:9:18.82:0,19,78	0/0:9,0:9:16.29:0,16,98	0/0:11,0:11:15.50:0,15,58	0/0:16,0:16:33.88:0,34,162	0/0:20,0:20:36.88:0,37,178	0/0:7,0:7:11.38:0,11,64	0/0:12,0:12:23.11:0,23,93	0/0:19,0:19:52.57:0,53,350	0/0:14,0:14:26.57:0,27,118	0/0:11,0:11:23.77:0,24,104	0/0:7,0:5:6:0,6,22	0/0:14,0:12:16.53:0,17,85	0/0:8,0:7:3.26:0,3,44	0/0:11,0:10:15.99:0,16,67	0/0:15,0:15:33.24:0,33,184	0/0:20,0:19:39.27:0,39,173	0/0:11,0:11:20.57:0,21,127
chr10	60663860	.	AT	A	14230.22	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-2.299;DP=556;FS=0.000;HRun=3;HaplotypeScore=79.8329;InbreedingCoeff=0.9610;MQ=53.03;MQ0=22;MQRankSum=-0.318;QD=26.85;ReadPosRankSum=3.779;VQSLOD=3.9708;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,28:29:71.59:853,72,0	1/1:0,14:14:33.10:407,33,0	0/0:14,0:6:9.42:0,9,132	0/0:12,0:6:17.31:0,17,162	1/1:11,23:31:72.17:857,72,0	1/1:1,17:17:42.13:515,42,0	1/1:2,21:20:53.85:661,54,0	1/1:22,0:20:33:184,33,0	1/1:2,18:19:32.73:366,33,0	1/1:2,18:19:54.16:656,54,0	1/1:1,19:20:42.13:518,42,0	1/1:2,15:16:30.09:366,30,0	1/1:1,18:19:51.13:609,51,0	1/1:1,15:15:33.10:403,33,0	1/1:3,18:20:39.10:463,39,0	1/1:0,15:15:42.13:513,42,0	1/1:0,22:21:45.14:553,45,0	1/1:2,7:6:18.06:221,18,0	1/1:4,15:15:45.10:518,45,0	1/1:3,31:33:81.23:985,81,0	1/1:2,16:17:42.13:518,42,0	1/1:3,20:23:69.14:806,69,0	1/1:2,24:25:54.17:665,54,0	1/1:2,19:21:57.13:671,57,0	1/1:1,11:12:30.09:370,30,0	1/1:1,21:21:60.13:696,60,0	1/1:2,17:18:33.05:389,33,0	1/1:1,14:13:39.10:466,39,0
chr10	60663862	.	T	TA	352.58	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-6.087;DP=557;FS=0.000;HRun=0;HaplotypeScore=132.8839;InbreedingCoeff=0.9370;MQ=54.51;MQ0=18;MQRankSum=-3.338;QD=17.63;ReadPosRankSum=-3.114;VQSLOD=4.2734;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:30:52.88:0,53,168	0/0:15,0:15:27.42:0,27,102	0/0:13,0:7:14.96:0,15,171	0/0:14,0:7:20.89:0,21,223	0/0:30,0:30:51.98:0,52,164	0/0:18,0:17:31.08:0,31,99	0/0:23,0:20:39.96:0,40,128	1/1:4,16:19:19.73:444,20,0	0/0:20,0:20:26.73:0,27,95	0/0:20,0:19:40.81:0,41,145	0/0:20,0:20:34.08:0,34,124	0/0:15,0:15:22.20:0,22,71	0/0:18,0:19:37.34:0,37,119	0/0:16,0:15:24.42:0,24,79	0/0:18,0:18:28.20:0,28,90	0/0:16,0:16:31.08:0,31,100	0/0:23,0:22:33.93:0,34,107	0/0:8,0:6:13.32:0,13,42	0/0:21,0:18:35.93:0,36,145	0/0:31,0:31:59.15:0,59,187	0/0:16,0:16:34.05:0,34,118	0/0:21,0:24:49.33:0,49,154	0/0:25,0:24:39.96:0,40,126	0/0:19,0:21:40.85:0,41,129	0/0:11,0:11:22.20:0,22,70	0/0:21,0:20:42.24:0,42,141	0/0:25,0:24:40.88:0,41,197	0/0:14,0:13:20.45:0,20,74
chr10	60664738	.	TA	T	14797.61	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-1.806;DP=524;FS=0.000;HRun=5;HaplotypeScore=57.4463;InbreedingCoeff=0.9822;MQ=68.10;MQ0=0;MQRankSum=-2.297;QD=30.45;ReadPosRankSum=4.886;VQSLOD=4.9938;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,37:38:99:1121,99,0	1/1:0,9:9:27.08:306,27,0	0/0:21,0:21:56.62:0,57,701	0/0:17,0:17:39.13:0,39,515	1/1:2,22:24:66.19:746,66,0	1/1:0,21:21:57.16:643,57,0	1/1:1,12:13:26.18:365,26,0	1/1:2,28:30:84.24:951,84,0	1/1:2,14:16:45.13:510,45,0	1/1:1,22:23:66.19:748,66,0	1/1:2,20:22:51.14:578,51,0	1/1:0,17:16:45.13:510,45,0	1/1:1,11:12:33.09:372,33,0	1/1:0,14:14:42.12:476,42,0	1/1:2,17:19:48.14:544,48,0	1/1:0,16:16:42.12:476,42,0	1/1:2,30:32:81.23:919,81,0	1/1:1,20:21:60.17:680,60,0	1/1:1,12:13:36.10:407,36,0	1/1:0,29:29:78.22:884,78,0	1/1:0,5:5:12.03:136,12,0	1/1:0,20:20:60.17:680,60,0	1/1:1,21:21:57.07:645,57,0	1/1:3,10:13:27.07:306,27,0	1/1:1,11:12:36.09:401,36,0	1/1:0,18:18:48.14:545,48,0	1/1:0,16:16:41.69:475,42,0	1/1:0,11:11:33.09:374,33,0
chr10	60664866	.	ATAGGAGGAGAAGCCC	A	25719.62	PASS	AB=0.647;AC=39;AF=0.696;AN=56;BaseQRankSum=14.703;DP=495;FS=5.669;HRun=0;HaplotypeScore=187.3642;InbreedingCoeff=0.8883;MQ=43.26;MQ0=26;MQRankSum=-11.862;QD=80.12;ReadPosRankSum=3.224;VQSLOD=4.4527;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,29:27:36.12:1540,36,0	1/1:0,7:7:8.63:410,9,0	0/0:16,0:5:15.05:0,15,870	0/0:31,0:16:42.11:0,42,1570	1/1:0,21:21:50.55:2005,51,0	0/0:12,0:12:33.11:0,33,2438	0/0:15,0:15:45.15:0,45,3035	0/0:43,0:35:99:0,102,5962	1/1:0,21:21:45.15:2049,45,0	1/1:0,16:15:36.11:1528,36,0	1/1:0,28:26:63.04:2304,63,0	1/1:1,11:11:18.02:820,18,0	1/1:0,12:11:24.08:1091,24,0	1/1:0,12:12:30.10:1324,30,0	1/1:0,16:14:27.09:1230,27,0	1/1:0,15:14:21.07:957,21,0	1/1:5,10:15:41.95:1381,42,0	0/1:5,6:10:4.95:523,0,5	1/1:1,21:16:36.11:1071,36,0	1/1:0,13:13:36.08:1523,36,0	1/1:1,10:9:12:430,12,0	0/0:15,0:15:42.14:0,42,2703	0/0:18,0:18:54.15:0,54,3587	0/0:24,0:24:72.25:0,72,4796	1/1:0,23:23:48.16:2187,48,0	1/1:0,10:10:30.08:1214,30,0	1/1:0,24:24:45.15:1996,45,0	1/1:0,3:3:3.01:137,3,0
chr10	60665051	.	A	AT	11243.23	PASS	AB=1.000;AC=53;AF=0.946;AN=56;BaseQRankSum=-4.769;DP=424;FS=5.644;HRun=8;HaplotypeScore=43.8802;InbreedingCoeff=0.5862;MQ=66.57;MQ0=1;MQRankSum=-0.149;QD=27.49;ReadPosRankSum=3.428;VQSLOD=5.2520;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,14:19:45.05:501,45,0	1/1:0,5:5:15.04:173,15,0	0/0:14,1:11:16.68:0,17,135	0/1:12,0:9:20.50:20,0,64	1/1:1,19:20:51.12:575,51,0	1/1:1,13:14:33.10:381,33,0	1/1:2,6:8:15.04:173,15,0	1/1:2,18:20:51.14:579,51,0	1/1:1,20:21:54.16:623,54,0	1/1:4,21:25:66.12:735,66,0	1/1:0,18:18:51.07:571,51,0	1/1:2,11:13:30.09:346,30,0	1/1:1,11:12:30.03:327,30,0	1/1:2,10:12:30.02:327,30,0	1/1:3,14:15:36.11:415,36,0	1/1:1,14:14:36.04:398,36,0	1/1:1,12:13:36.10:409,36,0	1/1:0,12:12:33.10:381,33,0	1/1:2,10:11:30.08:336,30,0	1/1:4,26:30:74.44:793,74,0	1/1:0,6:6:12.04:138,12,0	1/1:0,10:10:30.09:346,30,0	1/1:2,22:24:60.18:692,60,0	1/1:0,4:4:8.97:88,9,0	1/1:1,20:21:48.14:554,48,0	1/1:0,9:9:24.06:266,24,0	1/1:1,25:26:75.20:853,75,0	1/1:0,10:10:21.06:242,21,0
chr10	60665142	.	TA	T	589.92	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.715;DP=420;FS=0.800;HRun=7;HaplotypeScore=45.6792;InbreedingCoeff=0.7382;MQ=62.18;MQ0=1;MQRankSum=0.539;QD=24.58;ReadPosRankSum=-3.929;VQSLOD=2.0462;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:36.12:0,36,453	0/0:9,0:9:27.09:0,27,340	0/0:12,1:11:12.78:0,13,147	0/0:9,0:10:14.04:0,14,135	0/0:31,0:31:84.20:0,84,1004	0/0:16,0:16:45.12:0,45,542	0/0:16,0:16:39.10:0,39,466	1/1:1,23:24:69.12:685,69,0	0/0:19,0:19:51.16:0,51,642	0/0:29,0:28:84.27:0,84,1055	0/0:19,0:19:45.14:0,45,564	0/0:10,0:10:27.09:0,27,340	0/0:9,0:9:27.09:0,27,339	0/0:11,0:11:30.08:0,30,364	0/0:10,0:10:30.10:0,30,377	0/0:10,0:10:30.10:0,30,376	0/0:11,0:10:27.07:0,27,327	0/0:1,0:1:3.01:0,3,38	0/0:13,0:13:36.06:0,36,403	0/0:36,0:36:99:0,102,1269	0/0:10,0:10:30.08:0,30,363	0/0:17,0:17:48.15:0,48,604	0/0:16,0:16:42.12:0,42,515	0/0:2,0:2:6.02:0,6,75	0/0:17,0:17:48.15:0,48,604	0/0:20,0:20:60.18:0,60,743	0/0:20,0:20:57:0,57,698	0/0:5,0:5:15.02:0,15,173
chr10	60668114	.	T	TC	34.01	PASS	AB=0.926;AC=3;AF=0.065;AN=46;BaseQRankSum=-0.238;DP=347;FS=2.928;HRun=0;HaplotypeScore=49.9200;InbreedingCoeff=0.1847;MQ=63.73;MQ0=24;MQRankSum=-1.470;QD=1.17;ReadPosRankSum=-2.066;VQSLOD=1.2012;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:2:6.02:0,6,83	0/0:5,0:3:6.02:0,6,83	0/0:54,0:32:90.14:0,90,1164	0/0:44,0:21:57.19:0,57,796	0/0:15,0:15:18.06:0,18,250	0/0:16,1:14:21.03:0,21,271	0/0:18,0:16:39.13:0,39,545	0/1:23,2:12:74.74:75,0,189	0/0:9,0:1:3.01:0,3,42	0/0:7,0:6:15:0,15,186	0/0:13,0:13:15.05:0,15,208	0/0:4,0:2:3.01:0,3,42	./.	./.	0/0:11,0:2:6.02:0,6,83	./.	0/0:5,0:2:3.01:0,3,42	./.	1/1:3,1:1:3.01:48,3,0	0/0:23,0:23:39.13:0,39,541	./.	0/0:10,1:8:15.05:0,15,209	0/0:24,0:20:39.13:0,39,545	0/0:12,0:10:21.07:0,21,293	0/0:5,0:4:12.04:0,12,167	0/0:9,0:6:12.04:0,12,167	0/0:4,1:3:5.98:0,6,62	0/0:5,0:2:6.02:0,6,83
chr10	60670054	.	CAG	C	3151.18	PASS	AB=0.660;AC=32;AF=0.762;AN=42;BaseQRankSum=1.586;DP=293;FS=0.000;HRun=0;HaplotypeScore=25.7905;InbreedingCoeff=0.5431;MQ=19.39;MQ0=111;MQRankSum=1.737;QD=16.50;ReadPosRankSum=-0.155;VQSLOD=2.5931;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,3:3:9.03:125,9,0	./.	./.	./.	0/1:9,4:3:0:0,0,0	0/0:18,0:11:33.11:0,33,575	0/0:10,0:2:3.01:0,3,54	0/0:13,0:2:6:0,6,78	1/1:2,10:8:24.08:334,24,0	0/1:3,12:5:27.56:151,0,28	./.	1/1:3,5:5:12.04:159,12,0	1/1:0,7:7:18.06:250,18,0	1/1:1,10:7:18.06:244,18,0	1/1:1,12:11:33.11:453,33,0	1/1:3,14:12:36.12:494,36,0	1/1:10,6:6:15.05:209,15,0	1/1:11,2:3:6.02:77,6,0	1/1:9,1:1:3.01:42,3,0	1/1:7,7:4:6.02:83,6,0	1/1:1,1:1:3.01:42,3,0	./.	0/0:17,0:8:12.04:0,12,214	./.	1/1:3,2:1:3.01:42,3,0	1/1:4,5:2:6.02:83,6,0	1/1:4,16:16:36.12:501,36,0	./.
chr10	60672223	.	CA	C	14200.74	PASS	AB=0.545;AC=39;AF=0.696;AN=56;BaseQRankSum=8.710;DP=692;FS=8.418;HRun=2;HaplotypeScore=91.2506;InbreedingCoeff=0.9136;MQ=56.58;MQ0=16;MQRankSum=0.055;QD=31.98;ReadPosRankSum=4.607;VQSLOD=4.2744;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,26:26:60.20:778,60,0	1/1:0,7:7:21.07:272,21,0	0/0:48,0:27:75.16:0,75,1009	0/0:45,0:24:51.15:0,51,708	1/1:0,29:28:75.24:971,75,0	0/0:28,0:28:66.18:0,66,962	0/0:28,0:28:84.28:0,84,1257	0/0:24,0:22:66.22:0,66,989	1/1:0,23:23:57.19:740,57,0	1/1:0,40:38:99:1461,114,0	1/1:1,18:19:36.12:466,36,0	1/1:0,21:21:51.17:661,51,0	1/1:0,12:12:27.09:350,27,0	1/1:1,19:19:51.15:647,51,0	1/1:0,26:26:66.21:856,66,0	1/1:0,19:19:48.09:622,48,0	1/1:0,22:22:57.18:737,57,0	0/1:2,10:11:17.83:284,0,18	1/1:0,25:24:69.22:896,69,0	1/1:1,24:23:66.21:856,66,0	1/1:1,26:27:66.21:857,66,0	0/0:27,0:27:72.13:0,72,1004	0/0:25,0:25:69.16:0,69,984	0/0:22,0:22:54.15:0,54,785	1/1:0,7:7:15.05:194,15,0	1/1:0,30:29:87.27:1114,87,0	1/1:0,37:37:71.99:930,72,0	1/1:0,17:16:39.13:506,39,0
chr10	60672560	.	GA	G	4910.58	PASS	AB=0.768;AC=35;AF=0.761;AN=46;BaseQRankSum=-5.278;DP=548;FS=3.005;HRun=4;HaplotypeScore=45.0757;InbreedingCoeff=0.5187;MQ=23.35;MQ0=150;MQRankSum=-0.097;QD=12.46;ReadPosRankSum=0.884;VQSLOD=2.4833;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:21,9:9:32.89:63,0,33	1/1:1,7:7:15.05:180,15,0	./.	./.	1/1:5,31:26:30.09:359,30,0	0/0:23,0:17:30.06:0,30,397	0/0:12,0:3:3.01:0,3,42	./.	1/1:6,16:8:15.05:180,15,0	1/1:9,27:28:63.17:741,63,0	1/1:3,19:18:27.08:323,27,0	1/1:3,13:11:24.07:287,24,0	1/1:2,11:11:21.06:252,21,0	1/1:2,5:3:3.01:36,3,0	1/1:7,18:16:30.09:359,30,0	1/1:0,11:8:12.04:144,12,0	0/1:15,12:16:26.85:129,0,27	0/1:22,5:7:32.92:63,0,33	1/1:8,4:3:6.02:72,6,0	1/1:4,21:21:39.11:467,39,0	./.	0/0:25,0:16:18.02:0,18,229	0/0:25,0:19:30.06:0,30,397	./.	1/1:2,12:12:21.06:252,21,0	1/1:6,20:17:39.12:466,39,0	1/1:6,18:16:36.11:431,36,0	1/1:7,6:6:9.03:108,9,0
chr10	60673439	.	T	TA	11440.24	PASS	AB=1.000;AC=53;AF=0.946;AN=56;BaseQRankSum=-4.416;DP=423;FS=10.610;HRun=7;HaplotypeScore=36.3889;InbreedingCoeff=0.5813;MQ=57.46;MQ0=15;MQRankSum=-0.937;QD=28.18;ReadPosRankSum=3.162;VQSLOD=4.6214;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,29:33:78.16:910,78,0	1/1:1,6:7:18.06:217,18,0	0/0:17,0:7:20.79:0,21,176	0/1:12,0:4:20.43:20,0,27	1/1:4,19:23:60.16:704,60,0	1/1:1,16:16:42.13:507,42,0	1/1:0,5:5:9.03:109,9,0	1/1:4,19:21:54.15:639,54,0	1/1:0,10:10:27.08:326,27,0	1/1:1,21:22:57.17:688,57,0	1/1:1,21:22:63.19:756,63,0	1/1:2,12:14:24.07:290,24,0	1/1:0,13:13:33.10:398,33,0	1/1:1,10:11:24.07:290,24,0	1/1:1,10:11:30.09:362,30,0	1/1:1,10:11:18.05:218,18,0	1/1:4,13:17:44.62:516,45,0	1/1:2,13:15:33.10:399,33,0	1/1:3,7:9:21.06:253,21,0	1/1:1,16:17:45.14:540,45,0	1/1:0,3:3:9.03:109,9,0	1/1:2,6:8:18.06:217,18,0	1/1:1,19:19:51.16:616,51,0	1/1:1,6:7:18.05:217,18,0	1/1:3,19:22:51.16:616,51,0	1/1:2,11:13:33.10:399,33,0	1/1:6,18:25:48.15:579,48,0	1/1:0,15:15:45.14:544,45,0
chr10	60675483	.	A	AG	15904.63	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-0.907;DP=384;FS=0.925;HRun=0;HaplotypeScore=75.1232;InbreedingCoeff=0.9147;MQ=68.04;MQ0=0;MQRankSum=-7.043;QD=43.81;ReadPosRankSum=3.148;VQSLOD=5.3041;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,13:13:33.08:488,33,0	1/1:0,4:4:11.97:161,12,0	0/0:9,0:9:24.54:0,25,319	0/0:12,0:12:30.05:0,30,396	1/1:2,24:26:71.94:1020,72,0	1/1:8,19:27:78.24:1189,78,0	1/1:0,7:7:21.07:334,21,0	1/1:1,19:20:60.20:956,60,0	1/1:3,6:9:27.08:402,27,0	1/1:2,11:13:39.13:601,39,0	1/1:1,22:23:69.24:1092,69,0	1/1:1,8:9:27.08:406,27,0	1/1:0,11:11:33.11:524,33,0	1/1:1,6:7:18.06:285,18,0	1/1:0,12:12:36.12:572,36,0	1/1:0,7:7:21.07:334,21,0	1/1:1,14:15:42.14:664,42,0	1/1:4,7:11:26.99:363,27,0	1/1:4,19:23:63.21:985,63,0	1/1:2,24:26:75.24:1167,75,0	1/1:2,3:5:15.03:215,15,0	1/1:0,8:8:21.07:333,21,0	1/1:3,16:19:54.17:833,54,0	1/1:0,2:2:6.02:95,6,0	1/1:3,11:14:42.10:599,42,0	1/1:1,19:20:60.15:927,60,0	1/1:2,18:20:60.17:905,60,0	1/1:5,6:11:33.03:458,33,0
chr10	60675498	.	TA	T	9527.83	PASS	AC=50;AF=0.926;AN=54;BaseQRankSum=-0.442;DP=371;FS=14.830;HRun=6;HaplotypeScore=89.0998;InbreedingCoeff=0.9116;MQ=67.72;MQ0=0;MQRankSum=-6.740;QD=27.30;ReadPosRankSum=4.773;VQSLOD=3.7608;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,11:13:24.06:257,24,0	1/1:3,4:7:21.05:225,21,0	0/0:8,0:8:18.03:0,18,210	0/0:12,0:12:29.59:0,30,268	1/1:1,30:31:87.21:930,87,0	1/1:1,18:19:54.14:580,54,0	1/1:3,4:7:18.04:192,18,0	1/1:1,21:22:66.15:698,66,0	1/1:2,6:8:18.03:185,18,0	1/1:2,19:21:57.13:604,57,0	1/1:3,20:23:60.15:641,60,0	1/1:2,7:9:24.04:249,24,0	1/1:3,7:10:27.07:289,27,0	1/1:0,6:6:18.05:193,18,0	1/1:3,12:15:27.06:290,27,0	1/1:1,5:6:18.03:185,18,0	1/1:2,11:13:27.07:290,27,0	1/1:2,7:9:14.97:161,15,0	1/1:4,15:19:48.10:508,48,0	1/1:3,19:22:60.15:643,60,0	1/1:0,2:2:6.02:64,6,0	1/1:1,6:7:18.04:193,18,0	1/1:1,13:14:33.08:354,33,0	./.	1/1:0,13:13:39.10:419,39,0	1/1:4,13:17:42.09:444,42,0	1/1:1,24:25:63.16:676,63,0	1/1:0,11:11:24.06:258,24,0
chr10	60676628	.	GAT	G	132.38	PASS	AB=0.897;AC=11;AF=0.262;AN=42;BaseQRankSum=0.378;DP=247;FS=0.000;HRun=0;HaplotypeScore=48.9795;InbreedingCoeff=0.0266;MQ=81.34;MQ0=12;MQRankSum=0.176;QD=1.26;ReadPosRankSum=1.989;VQSLOD=1.1620;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:9.02:0,9,92	0/1:2,0:2:0:0,0,0	0/1:31,0:12:0:0,0,0	0/0:43,0:17:2.43:0,2,10	0/1:17,2:18:3.10:3,0,243	0/0:4,0:3:2.99:0,3,24	./.	0/0:20,0:19:22.63:0,23,155	./.	1/1:2,1:2:3.01:33,3,0	./.	./.	0/0:5,0:5:3.01:0,3,37	0/0:1,0:1:3.01:0,3,31	0/0:4,0:4:3.01:0,3,30	0/0:5,0:5:9.02:0,9,88	0/1:8,2:10:51.98:52,0,58	0/0:7,0:7:12.03:0,12,126	0/1:9,1:9:24.76:25,0,35	0/1:4,2:6:21.64:58,0,22	0/0:3,0:3:3:0,3,29	./.	./.	./.	1/1:8,1:9:3.01:33,3,0	0/0:17,0:17:36.06:0,36,360	0/0:5,0:5:3.01:0,3,31	0/1:13,2:15:39.72:40,0,193
chr10	60676665	.	AGT	A	460.25	PASS	AC=4;AF=0.083;AN=48;BaseQRankSum=-5.690;DP=199;FS=1.054;HRun=0;HaplotypeScore=67.9412;InbreedingCoeff=0.6245;MQ=59.62;MQ0=10;MQRankSum=-0.638;QD=20.01;ReadPosRankSum=-2.058;VQSLOD=3.2790;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:15.05:0,15,244	0/0:5,0:5:11.98:0,12,189	0/0:14,0:2:5.38:0,5,50	0/0:12,0:4:0.47:0,0,1	0/0:18,0:17:39.13:0,39,633	1/1:4,0:3:6.02:78,6,0	./.	1/1:13,6:17:39.12:490,39,0	0/0:3,0:3:9.03:0,9,142	0/0:7,0:6:18.02:0,18,270	0/0:7,0:7:18.06:0,18,284	0/0:3,0:3:9.03:0,9,144	0/0:6,0:6:17.89:0,18,253	0/0:2,0:2:6.02:0,6,99	0/0:4,0:4:12.04:0,12,194	0/0:3,0:3:6.02:0,6,103	0/0:7,0:7:20.88:0,21,264	0/0:9,0:9:24.01:0,24,325	0/0:10,0:9:26.58:0,27,401	0/0:10,0:10:21.85:0,22,305	0/0:2,0:2:6.01:0,6,73	./.	./.	./.	0/0:4,0:4:8.94:0,9,112	0/0:17,0:17:45.15:0,45,728	0/0:5,0:5:9.03:0,9,141	0/0:17,0:17:29.02:0,29,422
chr10	60676692	.	G	GCA	7831.92	PASS	AC=44;AF=0.880;AN=50;BaseQRankSum=-1.011;DP=219;FS=3.322;HRun=0;HaplotypeScore=42.9417;InbreedingCoeff=0.7041;MQ=64.01;MQ0=1;MQRankSum=-0.475;QD=42.80;ReadPosRankSum=5.598;VQSLOD=6.1839;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,12:15:21.07:425,21,0	1/1:0,6:6:14.98:304,15,0	0/0:7,0:3:6.01:0,6,66	./.	1/1:1,16:16:39.13:788,39,0	1/1:2,0:7:17.20:133,17,0	1/1:1,0:1:2.98:22,3,0	0/0:20,0:20:60.02:0,60,814	1/1:1,4:5:12.04:243,12,0	1/1:1,11:12:26.08:659,26,0	1/1:0,14:14:36.12:730,36,0	1/1:0,4:4:12.04:243,12,0	1/1:0,7:8:20.99:382,21,0	1/1:1,3:4:9.03:182,9,0	1/1:0,6:6:18.06:365,18,0	1/1:0,1:1:3.01:58,3,0	1/1:0,6:6:15.05:303,15,0	1/1:0,9:9:18.06:364,18,0	1/1:1,9:10:30.10:570,30,0	1/1:1,10:11:18.06:364,18,0	1/1:0,5:5:6.02:122,6,0	./.	0/0:3,0:3:6.02:0,6,98	./.	1/1:0,5:6:9.03:183,9,0	1/1:1,13:14:26.04:647,26,0	1/1:1,7:7:18.06:362,18,0	1/1:0,14:14:21.02:383,21,0
chr10	60677655	.	C	CAACA	20937.75	PASS	AB=0.626;AC=50;AF=0.893;AN=56;BaseQRankSum=-5.547;DP=565;FS=3.786;HRun=0;HaplotypeScore=83.3362;InbreedingCoeff=0.6425;MQ=64.93;MQ0=1;MQRankSum=-2.221;QD=39.51;ReadPosRankSum=5.206;VQSLOD=4.4077;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,10:21:22.38:499,22,0	1/1:5,8:13:21.07:473,21,0	0/0:21,0:19:23.66:0,24,311	0/0:14,0:14:11.28:0,11,170	1/1:9,22:31:63.21:1385,63,0	1/1:8,14:21:35.33:808,35,0	1/1:4,9:13:17.65:335,18,0	1/1:11,16:31:58.35:965,58,0	1/1:5,18:24:45.15:1100,45,0	1/1:7,24:32:50.01:1703,50,0	1/1:8,14:23:36.12:806,36,0	1/1:6,12:18:30.10:732,30,0	1/1:1,16:17:30.10:733,30,0	1/1:1,12:13:24.08:587,24,0	1/1:3,19:23:45.15:1100,45,0	1/1:0,5:6:6.02:147,6,0	0/1:5,12:17:3.05:492,0,3	1/1:4,7:12:15.05:366,15,0	0/1:9,9:18:5.52:600,0,6	1/1:8,21:31:51.17:1143,51,0	1/1:6,8:14:15.05:367,15,0	1/1:4,10:15:27:514,27,0	1/1:3,21:25:42.99:975,43,0	1/1:5,12:17:30.10:716,30,0	1/1:4,18:22:42.14:1027,42,0	1/1:5,17:22:51.17:1236,51,0	1/1:9,21:33:40.08:956,40,0	1/1:0,17:17:48.16:1173,48,0
chr10	60679181	.	GA	G	1371.21	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.942;DP=593;FS=3.938;HRun=2;HaplotypeScore=55.5487;InbreedingCoeff=0.9982;MQ=79.68;MQ0=0;MQRankSum=-2.050;QD=35.16;ReadPosRankSum=-6.008;VQSLOD=1.3676;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:57.19:0,57,854	0/0:12,0:12:36.12:0,36,540	0/0:19,0:19:54.10:0,54,726	0/0:9,0:9:27.04:0,27,353	0/0:32,0:32:96.33:0,96,1439	0/0:16,0:16:48.16:0,48,718	0/0:13,0:13:39.11:0,39,564	1/1:0,39:39:99:1466,114,0	0/0:14,0:14:42.14:0,42,630	0/0:29,0:29:84.28:0,84,1254	0/0:22,0:22:66.22:0,66,989	0/0:27,0:27:78.20:0,78,1142	0/0:16,0:16:48.15:0,48,702	0/0:21,0:21:60.20:0,60,899	0/0:30,0:30:90.30:0,90,1349	0/0:13,0:13:39.12:0,39,565	0/0:15,0:15:45.15:0,45,674	0/0:13,0:13:36.12:0,36,539	0/0:26,0:26:75.25:0,75,1106	0/0:30,0:30:87.29:0,87,1304	0/0:12,0:12:33.11:0,33,495	0/0:25,0:25:75.25:0,75,1124	0/0:26,0:26:78.26:0,78,1169	0/0:18,0:18:54.18:0,54,809	0/0:15,0:15:45.13:0,45,653	0/0:24,0:24:72.24:0,72,1073	0/0:43,0:40:99:0,123,1836	0/0:15,0:15:42.14:0,42,626
chr10	60679830	.	CTT	C	9173.22	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-5.862;DP=380;FS=19.296;HRun=11;HaplotypeScore=56.6748;InbreedingCoeff=0.9393;MQ=71.20;MQ0=4;MQRankSum=-2.547;QD=25.48;ReadPosRankSum=4.642;VQSLOD=2.8099;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,22:24:60.15:639,60,0	1/1:0,8:8:18.04:192,18,0	0/0:7,0:6:14.54:0,15,180	0/0:11,0:11:10.69:0,11,140	1/1:0,21:21:57.13:607,57,0	1/1:1,10:11:27.07:287,27,0	1/1:1,10:11:27.07:287,27,0	1/1:2,15:18:39.05:470,39,0	1/1:3,16:19:39.09:415,39,0	1/1:1,11:12:33.06:343,33,0	1/1:5,17:22:47.57:495,48,0	1/1:0,13:13:39.10:415,39,0	1/1:1,7:8:18.04:192,18,0	1/1:0,7:7:18.01:192,18,0	1/1:2,5:7:15.04:160,15,0	1/1:1,6:7:18.04:192,18,0	1/1:0,15:15:39.10:415,39,0	1/1:3,11:13:27.05:287,27,0	1/1:4,10:14:30.01:303,30,0	1/1:0,16:16:48.12:511,48,0	1/1:1,9:10:21.05:224,21,0	1/1:3,12:15:31.16:322,31,0	1/1:2,13:15:29.82:319,30,0	1/1:0,11:11:30.08:319,30,0	1/1:3,12:15:30.05:319,30,0	1/1:0,13:13:39.10:415,39,0	1/1:0,19:20:53.87:555,54,0	1/1:2,10:12:29.78:299,30,0
chr10	60684845	.	CT	C	2149.89	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=8.193;DP=583;FS=1.630;HRun=5;HaplotypeScore=48.0999;InbreedingCoeff=0.9200;MQ=53.80;MQ0=35;MQRankSum=-0.576;QD=15.69;ReadPosRankSum=-0.419;VQSLOD=2.6360;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:26:57.18:0,57,763	0/0:18,0:18:51.17:0,51,698	0/0:19,0:2:3.01:0,3,35	0/0:14,0:2:2.94:0,3,24	0/0:30,0:30:69.22:0,69,925	1/1:1,23:24:33.07:374,33,0	1/1:3,13:9:15.04:170,15,0	1/1:5,26:9:24.04:260,24,0	0/0:16,0:16:21.03:0,21,270	0/0:18,0:18:51.14:0,51,664	0/0:27,0:27:78.23:0,78,1034	0/0:11,0:11:24.08:0,24,328	0/0:16,0:16:12.04:0,12,161	0/0:13,0:13:24.08:0,24,328	0/0:13,0:13:27.09:0,27,369	0/0:18,0:18:30.07:0,30,390	0/0:33,0:31:66.19:0,66,865	0/0:20,0:19:42.14:0,42,574	0/0:26,0:13:39.13:0,39,533	0/0:32,0:32:87.27:0,87,1156	0/0:13,0:13:27.09:0,27,369	1/1:0,17:17:42.12:476,42,0	1/1:2,30:32:66.19:749,66,0	1/1:2,15:16:27.08:306,27,0	0/0:16,0:16:39.11:0,39,515	0/0:18,0:18:54.18:0,54,739	0/0:35,0:33:72.04:0,72,943	0/0:13,0:13:33.11:0,33,451
chr10	60686928	.	GT	G	15565.16	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=14.467;DP=549;FS=6.211;HRun=1;HaplotypeScore=84.7528;InbreedingCoeff=0.9892;MQ=69.04;MQ0=1;MQRankSum=-0.294;QD=38.91;ReadPosRankSum=4.429;VQSLOD=5.3770;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,28:28:84.28:1169,84,0	1/1:0,12:12:33.11:461,33,0	0/0:13,1:13:28.75:0,29,281	0/0:8,0:8:9.02:0,9,119	1/1:0,22:22:63.17:858,63,0	0/0:29,0:29:84.23:0,84,1269	0/0:11,0:11:33.11:0,33,527	0/0:30,0:30:90.29:0,90,1397	1/1:0,24:24:72.24:1007,72,0	1/1:1,31:31:90.24:1204,90,0	1/1:0,20:20:54.18:754,54,0	1/1:0,19:19:57.19:797,57,0	1/1:0,20:20:57.19:796,57,0	1/1:0,21:21:51.17:713,51,0	1/1:0,16:16:45.15:629,45,0	1/1:1,13:14:33.06:439,33,0	1/1:0,13:13:39.13:545,39,0	1/1:0,13:13:36.12:503,36,0	1/1:0,22:22:66.20:905,66,0	1/1:0,17:16:48.09:645,48,0	1/1:0,27:27:78.26:1090,78,0	0/0:28,0:28:84.26:0,84,1296	0/0:13,0:13:39.08:0,39,594	0/0:16,0:16:48.15:0,48,743	1/1:0,10:10:24.08:336,24,0	1/1:0,26:26:75.20:996,75,0	1/1:0,34:34:99:1384,99,0	1/1:0,10:10:24.08:336,24,0
chr10	60687722	.	TA	T	8309.64	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=5.815;DP=430;FS=0.000;HRun=7;HaplotypeScore=49.3291;InbreedingCoeff=0.9384;MQ=64.99;MQ0=0;MQRankSum=-0.218;QD=25.49;ReadPosRankSum=2.789;VQSLOD=5.2648;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,21:23:60.14:612,60,0	1/1:1,4:5:12.03:122,12,0	0/0:4,0:4:5.55:0,6,59	0/0:14,0:13:3.67:0,4,274	1/1:0,22:22:57.13:581,57,0	0/0:15,0:15:39.08:0,39,472	0/0:18,0:18:48.15:0,48,602	0/0:29,0:29:72.22:0,72,893	1/1:0,16:16:39.09:398,39,0	1/1:2,20:22:57.13:581,57,0	1/1:3,18:21:39.08:398,39,0	1/1:0,10:10:30.07:305,30,0	1/1:0,6:6:18.04:184,18,0	1/1:0,7:7:18.04:184,18,0	1/1:0,7:7:15.03:153,15,0	1/1:0,13:13:36.08:367,36,0	1/1:1,20:21:48.11:489,48,0	1/1:0,13:13:36.08:367,36,0	1/1:1,16:17:48.11:490,48,0	1/1:1,17:18:48.11:490,48,0	1/1:1,22:23:57.13:582,57,0	0/0:7,0:7:15.05:0,15,189	0/0:9,0:9:21.07:0,21,264	0/0:8,0:8:24.08:0,24,302	1/1:1,14:15:27.06:275,27,0	1/1:1,20:21:60.13:611,60,0	1/1:3,33:36:90.16:907,90,0	1/1:0,10:10:21.05:214,21,0
chr10	60688344	.	CT	C	4779.43	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=7.389;DP=605;FS=0.000;HRun=1;HaplotypeScore=92.1986;InbreedingCoeff=0.8661;MQ=32.68;MQ0=88;MQRankSum=4.169;QD=12.64;ReadPosRankSum=-0.258;VQSLOD=3.2595;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,28:26:28.78:238,29,0	1/1:1,6:6:11.86:108,12,0	0/0:55,0:4:12.03:0,12,158	0/0:56,0:1:3.01:0,3,48	1/1:3,14:13:20.45:172,20,0	0/0:28,0:24:60.19:0,60,931	0/0:10,0:4:6.02:0,6,96	0/0:15,0:6:18.04:0,18,263	1/1:0,16:13:29.95:256,30,0	1/1:5,29:29:81.93:786,82,0	1/1:4,18:17:34.20:319,34,0	1/1:0,17:12:20.65:186,21,0	1/1:2,16:16:24.01:223,24,0	1/1:0,19:17:26.89:208,27,0	1/1:1,24:21:14.96:120,15,0	1/1:3,18:20:38.97:338,39,0	1/1:1,10:9:6.48:59,6,0	1/1:4,14:17:20.96:179,21,0	1/1:4,9:9:27.06:279,27,0	1/1:9,16:16:23.90:203,24,0	1/1:1,8:6:11.97:98,12,0	0/0:30,0:22:57.19:0,57,905	0/0:22,0:13:24.08:0,24,382	0/0:11,0:7:6.02:0,6,95	1/1:1,15:13:23.49:193,23,0	1/1:3,21:16:42.06:419,42,0	1/1:2,26:23:43.65:368,44,0	1/1:0,4:3:3:29,3,0
chr10	60688349	.	TG	T	4891.65	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=6.917;DP=610;FS=0.000;HRun=2;HaplotypeScore=91.9383;InbreedingCoeff=0.8767;MQ=32.40;MQ0=85;MQRankSum=3.521;QD=13.01;ReadPosRankSum=-1.736;VQSLOD=3.1082;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,28:22:29.92:241,30,0	1/1:1,6:6:11.99:110,12,0	0/0:58,0:4:12.04:0,12,157	0/0:59,0:2:5.98:0,6,56	1/1:2,14:13:23.86:188,24,0	0/0:31,0:27:53.89:0,54,482	0/0:10,0:5:5.95:0,6,54	0/0:10,0:3:8.99:0,9,74	1/1:1,16:14:29.98:267,30,0	1/1:4,31:30:87.06:836,87,0	1/1:4,19:18:36:317,36,0	1/1:0,17:12:20.66:187,21,0	1/1:2,16:17:24.02:231,24,0	1/1:2,16:15:20.94:168,21,0	1/1:2,22:20:14.98:124,15,0	1/1:0,22:21:39.01:356,39,0	1/1:1,12:10:9.49:95,9,0	1/1:5,14:18:26.97:238,27,0	1/1:3,9:9:27.06:277,27,0	1/1:5,18:15:23.94:203,24,0	1/1:1,8:6:11.99:100,12,0	0/0:32,0:22:50.88:0,51,461	0/0:22,0:13:24.01:0,24,217	0/0:12,0:7:6.01:0,6,56	1/1:0,18:15:26.94:238,27,0	1/1:5,18:15:36.06:360,36,0	1/1:0,27:22:36.01:327,36,0	1/1:2,4:5:3:27,3,0
chr10	60689280	.	AT	A	14810.69	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=5.507;DP=539;FS=2.042;HRun=1;HaplotypeScore=56.0430;InbreedingCoeff=0.9970;MQ=90.53;MQ0=1;MQRankSum=-4.101;QD=38.87;ReadPosRankSum=3.361;VQSLOD=5.4479;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,23:23:66.22:922,66,0	1/1:0,11:11:33.11:461,33,0	0/0:22,0:22:63.21:0,63,943	0/0:21,0:20:48.97:0,49,752	1/1:0,33:33:90.30:1258,90,0	0/0:22,0:22:63.20:0,63,984	0/0:11,0:11:33.11:0,33,528	0/0:33,0:33:96.32:0,96,1514	1/1:0,22:22:57.19:797,57,0	1/1:0,22:22:66.20:897,66,0	1/1:0,24:24:57.19:791,57,0	1/1:0,10:10:30.10:419,30,0	1/1:0,20:20:60.20:838,60,0	1/1:0,7:7:21.07:294,21,0	1/1:0,13:13:36.12:503,36,0	1/1:0,15:15:39.13:545,39,0	1/1:0,20:20:51.17:713,51,0	1/1:0,9:9:21.07:293,21,0	1/1:0,17:17:51.17:713,51,0	1/1:0,46:46:99:1801,129,0	1/1:0,15:15:45.15:629,45,0	0/0:16,0:16:45.15:0,45,720	0/0:26,0:26:78.27:0,78,1247	0/0:7,0:7:18.05:0,18,265	1/1:0,22:22:60.20:839,60,0	1/1:0,16:16:48.16:671,48,0	1/1:0,26:26:72.24:1006,72,0	1/1:0,10:10:30.10:419,30,0
chr10	60695473	.	A	AAC	2589.24	PASS	AB=0.782;AC=33;AF=0.611;AN=54;BaseQRankSum=0.978;DP=509;FS=0.594;HRun=0;HaplotypeScore=95.9076;InbreedingCoeff=0.4246;MQ=69.58;MQ0=13;MQRankSum=-3.156;QD=8.09;ReadPosRankSum=0.508;VQSLOD=3.0784;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:16,18:38:15.82:44,0,16	1/1:2,6:8:4.83:54,5,0	0/0:33,0:16:24.80:0,25,200	0/0:43,0:29:28.51:0,29,483	1/1:13,0:12:3:25,3,0	0/0:14,0:14:3.12:0,3,136	0/0:13,0:13:12.59:0,13,247	0/0:17,0:16:28.49:0,28,384	1/1:19,0:20:7.99:40,8,0	1/1:15,0:15:16.87:397,17,0	1/1:8,0:7:8.73:104,9,0	0/1:8,6:16:28.59:58,0,29	1/1:3,7:11:3.01:49,3,0	1/1:5,9:14:2.79:15,3,0	1/1:9,14:24:8.15:70,8,0	0/1:5,8:14:31.30:44,0,31	1/1:15,3:19:44.61:628,45,0	1/1:7,0:7:5.99:71,6,0	0/1:17,0:16:4.32:373,0,4	1/1:7,7:15:3.01:50,3,0	1/1:12,19:31:5.75:62,6,0	0/0:19,0:19:22.61:0,23,246	0/0:8,0:8:9.52:0,10,186	0/0:26,0:26:33.42:0,33,449	./.	0/1:11,0:11:4.94:155,0,5	1/1:6,16:24:5.87:63,6,0	1/1:12,0:12:33.08:469,33,0
chr10	60695483	.	CACAT	C	873.80	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=1.330;DP=552;FS=6.562;HRun=0;HaplotypeScore=100.4007;InbreedingCoeff=-0.2255;MQ=63.00;MQ0=16;MQRankSum=-3.980;QD=2.71;ReadPosRankSum=-3.149;VQSLOD=-0.0320;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:42,0:42:17.35:17,0,265	0/0:9,0:9:9.01:0,9,119	0/1:31,0:14:19.19:19,0,104	0/1:40,0:26:9.14:9,0,251	0/1:15,0:14:37.16:37,0,70	0/0:14,0:14:17.87:0,18,202	0/0:17,0:17:27.02:0,27,323	0/0:21,0:20:26.10:0,26,341	1/1:3,18:21:12.04:207,12,0	0/1:19,0:18:99:172,0,132	0/0:12,0:11:1.97:0,2,136	0/0:18,0:18:20.98:0,21,342	0/0:9,0:9:6.02:0,6,76	0/0:16,0:15:3.01:0,3,33	0/0:25,0:24:17.82:0,18,265	0/0:13,0:13:6.46:0,6,71	0/1:23,0:23:99:122,0,333	0/1:8,0:8:12.76:13,0,54	0/1:13,0:12:78.41:78,0,171	0/0:18,0:18:26.24:0,26,431	0/1:36,0:35:48.21:48,0,104	0/0:13,0:13:1.65:0,2,245	0/0:10,0:10:20.96:0,21,232	0/0:34,0:33:53.59:0,54,563	0/1:16,0:15:11.76:16,0,12	0/1:14,0:14:99:117,0,111	0/1:26,0:25:0.90:1,0,95	0/1:19,0:19:50.26:169,0,50
chr10	60695485	.	C	CAC	2527.57	PASS	AB=1.000;AC=33;AF=0.611;AN=54;BaseQRankSum=0.227;DP=548;FS=0.594;HRun=0;HaplotypeScore=86.2304;InbreedingCoeff=0.4034;MQ=60.09;MQ0=16;MQRankSum=-1.816;QD=7.20;ReadPosRankSum=2.938;VQSLOD=3.2645;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:41,0:41:15.82:44,0,16	1/1:8,0:8:4.83:54,5,0	0/0:30,0:13:24.80:0,25,200	0/0:37,0:24:28.51:0,29,483	1/1:8,7:15:3:25,3,0	0/0:14,0:14:3.20:0,3,136	0/0:18,0:18:12.59:0,13,247	0/0:22,0:22:31.97:0,32,403	1/1:19,0:19:7.99:40,8,0	1/1:18,0:17:16.87:397,17,0	1/1:12,0:11:8.82:104,9,0	0/1:18,0:18:27.34:59,0,27	1/1:9,0:9:3.01:49,3,0	1/1:17,0:16:2.88:15,3,0	1/1:24,0:23:8.15:70,8,0	0/1:13,0:13:31.22:44,0,31	1/1:22,0:23:43.74:627,44,0	1/1:8,0:8:2.99:46,3,0	0/1:13,0:12:10.29:334,0,10	1/1:20,0:20:3.01:50,3,0	1/1:34,0:33:5.66:62,6,0	0/0:13,0:13:22.61:0,23,246	0/0:10,0:10:9.52:0,10,186	0/0:35,0:34:33.13:0,33,448	./.	0/1:14,0:15:4.94:154,0,5	1/1:24,0:23:5.86:63,6,0	1/1:18,0:19:34.32:472,34,0
chr10	60695487	.	T	TAC	404.70	PASS	AB=0.930;AC=18;AF=0.346;AN=52;BaseQRankSum=1.430;DP=558;FS=12.058;HRun=0;HaplotypeScore=98.5835;InbreedingCoeff=0.0691;MQ=58.10;MQ0=16;MQRankSum=0.854;QD=1.88;ReadPosRankSum=3.875;VQSLOD=1.0556;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:46:9.61:0,10,163	0/1:8,0:8:5.90:6,0,15	./.	./.	0/0:16,0:15:13.32:0,13,110	1/1:10,4:14:6.02:90,6,0	0/1:12,7:20:36.03:36,0,37	1/1:25,0:24:0.50:1,1,0	0/0:18,0:19:8.29:0,8,37	0/0:18,0:18:2.96:0,3,13	0/1:12,0:11:28.38:28,0,112	0/0:18,0:18:13.03:0,13,129	0/1:10,0:10:3.76:4,0,9	0/1:18,0:17:15.43:18,0,15	0/0:24,0:23:13.94:0,14,108	0/0:12,0:13:0.81:0,1,11	0/1:23,0:23:50.08:50,0,52	0/0:8,0:8:2.32:0,2,31	1/1:13,0:12:3.48:12,3,0	0/0:21,0:21:22:0,22,241	0/0:37,0:36:9.62:0,10,72	1/1:13,0:13:3.48:43,3,0	1/1:6,4:10:6.02:75,6,0	0/1:22,13:34:14.65:164,0,15	0/0:15,0:15:3.89:0,4,31	0/1:14,0:14:20.59:21,0,21	0/0:23,0:22:3.89:0,4,39	0/0:19,0:19:7.08:0,7,28
chr10	60700366	.	A	AGGGGAG	5045.08	PASS	AB=0.545;AC=39;AF=0.975;AN=40;BaseQRankSum=-0.321;DP=96;FS=17.324;HRun=0;HaplotypeScore=18.9897;InbreedingCoeff=-0.1165;MQ=47.68;MQ0=2;MQRankSum=-1.027;QD=59.35;ReadPosRankSum=1.283;VQSLOD=2.9361;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,3:4:6.02:212,6,0	./.	./.	./.	1/1:0,5:7:9.03:257,9,0	1/1:1,0:1:3.01:87,3,0	1/1:1,5:3:9.03:293,9,0	0/1:1,4:6:2.80:515,0,3	./.	1/1:0,4:7:18.06:626,18,0	1/1:0,1:2:3.01:106,3,0	1/1:0,3:3:9.03:319,9,0	1/1:0,7:5:15.05:513,15,0	1/1:1,1:1:3.01:86,3,0	1/1:0,1:2:3.01:106,3,0	1/1:0,2:4:6.02:213,6,0	1/1:3,1:4:2.97:20,3,0	./.	1/1:0,4:6:18.01:470,18,0	1/1:0,3:5:9.03:300,9,0	./.	1/1:0,2:1:3.01:85,3,0	1/1:0,3:5:9.03:298,9,0	./.	1/1:0,2:3:6.02:193,6,0	1/1:0,3:2:6.02:213,6,0	1/1:3,1:4:6:130,6,0	./.
chr10	60701282	.	A	AT	13418.04	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-0.853;DP=386;FS=12.056;HRun=3;HaplotypeScore=61.5095;InbreedingCoeff=0.9620;MQ=78.69;MQ0=0;MQRankSum=-6.728;QD=36.56;ReadPosRankSum=3.634;VQSLOD=4.5977;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,11:11:30.10:420,30,0	1/1:0,5:5:15.05:210,15,0	0/0:9,0:9:24.07:0,24,287	0/0:10,0:10:21.53:0,22,253	1/1:4,13:17:42.13:573,42,0	1/1:3,22:25:60.20:840,60,0	1/1:1,11:12:30.10:420,30,0	1/1:1,23:24:69.23:965,69,0	1/1:2,15:17:39.13:546,39,0	1/1:0,20:20:60.19:822,60,0	1/1:1,18:19:54.03:702,54,0	1/1:1,6:7:18.06:251,18,0	1/1:0,9:9:24.08:336,24,0	1/1:0,10:10:27.09:378,27,0	1/1:0,5:5:12.04:168,12,0	1/1:0,12:12:36.12:504,36,0	1/1:1,10:11:30.10:420,30,0	1/1:0,14:14:42.14:588,42,0	1/1:5,17:22:54.18:756,54,0	1/1:1,22:23:66.15:900,66,0	1/1:1,9:10:24.08:336,24,0	1/1:0,8:8:21.07:294,21,0	1/1:0,14:14:33.11:462,33,0	1/1:0,17:17:48.16:672,48,0	1/1:0,16:16:36.12:504,36,0	1/1:2,14:16:42.12:569,42,0	1/1:4,12:16:36.12:487,36,0	1/1:0,7:7:21.07:294,21,0
chr10	60701412	.	CTT	C	7378.66	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-8.855;DP=377;FS=0.549;HRun=10;HaplotypeScore=64.7921;InbreedingCoeff=0.9348;MQ=67.11;MQ0=0;MQRankSum=0.356;QD=26.17;ReadPosRankSum=1.175;VQSLOD=4.7093;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,22:27:51.12:568,51,0	1/1:0,9:9:27.07:301,27,0	0/0:8,0:7:5.99:0,6,69	0/0:5,0:5:11.62:0,12,131	1/1:4,25:29:63.13:699,63,0	0/0:3,0:10:17.47:0,17,60	0/0:2,0:13:25.30:0,25,96	0/0:9,0:23:40.94:0,41,178	1/1:0,8:8:21.06:234,21,0	1/1:1,9:10:27.07:301,27,0	1/1:5,16:21:48.09:517,48,0	1/1:0,6:6:9.02:100,9,0	1/1:2,5:7:12.03:134,12,0	1/1:2,6:8:15.04:167,15,0	1/1:1,7:8:12.03:134,12,0	1/1:0,3:3:9.02:100,9,0	1/1:1,12:13:33.09:368,33,0	1/1:1,8:8:24.06:267,24,0	1/1:4,16:20:48.12:535,48,0	1/1:5,20:25:66.12:721,66,0	1/1:2,17:19:42.11:468,42,0	0/0:2,0:8:12.48:0,12,43	0/0:0,0:16:29.94:0,30,103	0/0:3,0:12:17.47:0,17,60	1/1:1,13:14:33.07:368,33,0	1/1:3,11:14:36.08:393,36,0	1/1:2,17:19:51.13:568,51,0	1/1:0,13:13:39.11:435,39,0
chr10	60705386	.	C	CT	1805.97	PASS	AC=34;AF=0.895;AN=38;BaseQRankSum=-2.046;DP=185;FS=6.021;HRun=4;HaplotypeScore=12.2959;InbreedingCoeff=0.2551;MQ=25.20;MQ0=62;MQRankSum=-0.025;QD=17.04;ReadPosRankSum=0.531;VQSLOD=1.9317;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	1/1:2,2:3:3.01:41,3,0	0/0:27,0:1:2.04:0,2,6	./.	1/1:1,1:2:3.01:41,3,0	1/1:2,5:5:15.05:205,15,0	./.	./.	./.	1/1:1,3:3:9.03:119,9,0	1/1:0,4:2:3.01:41,3,0	1/1:0,1:1:3.01:41,3,0	1/1:2,3:3:9.03:123,9,0	1/1:1,2:2:6.02:82,6,0	1/1:2,1:1:3.01:41,3,0	1/1:0,2:2:6.02:82,6,0	./.	./.	0/0:7,0:1:3.01:0,3,34	1/1:1,3:3:9.03:123,9,0	./.	1/1:0,7:7:21.03:266,21,0	1/1:2,5:4:9.03:123,9,0	./.	1/1:2,5:5:15.05:205,15,0	1/1:8,7:7:21.07:286,21,0	1/1:23,1:1:3.01:41,3,0	1/1:5,1:2:3.01:41,3,0
chr10	60705917	.	T	TG	2105.36	PASS	AC=20;AF=1.000;AN=20;DP=179;FS=0.000;HRun=0;HaplotypeScore=33.0923;InbreedingCoeff=-0.0509;MQ=18.23;MQ0=60;QD=22.40;VQSLOD=4.3776;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	1/1:0,3:3:6.02:96,6,0	./.	./.	1/1:2,12:12:30.10:475,30,0	./.	./.	./.	./.	1/1:3,6:4:12.04:191,12,0	1/1:0,8:8:21.07:333,21,0	./.	./.	./.	./.	./.	./.	./.	./.	1/1:1,12:11:24.08:381,24,0	./.	1/1:4,8:8:9.03:143,9,0	1/1:4,8:8:15.05:224,15,0	./.	1/1:0,4:4:9.03:143,9,0	1/1:5,2:1:3.01:48,3,0	1/1:8,4:3:9.03:143,9,0	./.
chr10	60706384	.	C	CT	191.18	PASS	AC=10;AF=1.00;AN=10;DP=49;FS=0.000;HRun=2;HaplotypeScore=4.7065;MQ=14.91;MQ0=17;QD=13.66;VQSLOD=2.3342;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	./.	1/1:0,3:2:6.02:86,6,0	./.	./.	./.	1/1:3,1:1:3.01:43,3,0	1/1:1,1:1:3.01:43,3,0	./.	./.	./.	./.	1/1:0,2:2:3.01:43,3,0	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	1/1:2,1:1:3.01:43,3,0	./.
chr10	60708459	.	CCTATT	C	358.09	PASS	AB=0.918;AC=14;AF=0.700;AN=20;BaseQRankSum=2.436;DP=92;FS=0.000;HRun=0;HaplotypeScore=32.3856;InbreedingCoeff=0.0651;MQ=101.61;MQ0=7;MQRankSum=0.681;QD=5.12;ReadPosRankSum=-0.590;VQSLOD=0.9870;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/1:26,1:19:31.21:31,0,889	0/1:23,1:16:37.68:38,0,627	1/1:1,0:1:3.01:48,3,0	./.	1/1:3,0:1:3.01:49,3,0	1/1:3,0:1:3.01:49,3,0	1/1:1,0:1:3.01:48,3,0	1/1:0,3:3:9.03:140,9,0	1/1:3,0:2:3.01:48,3,0	./.	./.	./.	./.	./.	./.	./.	./.	0/0:2,0:2:5.91:0,6,38	./.	./.	0/0:2,3:4:2.96:0,3,19	./.	./.	./.	./.	./.
chr10	60708461	.	T	TG	304.64	PASS	AB=0.960;AC=13;AF=0.722;AN=18;BaseQRankSum=2.031;DP=83;FS=0.000;HRun=0;HaplotypeScore=27.0259;MQ=106.93;MQ0=4;MQRankSum=-0.871;QD=7.81;ReadPosRankSum=-1.110;VQSLOD=2.7174;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/1:23,1:18:23.70:24,0,365	0/0:23,1:14:15.41:0,15,304	1/1:2,1:3:3.01:48,3,0	./.	1/1:1,2:1:3.01:48,3,0	1/1:0,2:1:3.01:48,3,0	1/1:0,1:1:3.01:47,3,0	1/1:3,0:3:9.03:137,9,0	1/1:2,1:2:3.01:47,3,0	./.	./.	./.	./.	./.	./.	./.	./.	0/0:2,0:2:6.02:0,6,71	./.	./.	./.	./.	./.	./.	./.	./.
chr10	60709880	.	GT	G	13265.37	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=6.237;DP=602;FS=2.923;HRun=2;HaplotypeScore=70.4254;InbreedingCoeff=0.9976;MQ=69.98;MQ0=2;MQRankSum=2.400;QD=32.43;ReadPosRankSum=4.461;VQSLOD=4.8020;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,26:27:33.44:929,33,0	1/1:0,7:7:21.07:272,21,0	0/0:18,0:16:42.87:0,43,533	0/0:10,0:8:19.62:0,20,274	1/1:0,31:30:81.17:1012,81,0	0/0:35,0:35:84.28:0,84,1241	0/0:24,0:24:66.17:0,66,946	0/0:22,0:21:63.17:0,63,902	1/1:0,12:12:27.09:350,27,0	1/1:2,25:27:33.35:893,33,0	1/1:0,19:19:45.14:576,45,0	1/1:0,14:14:39.13:506,39,0	1/1:1,17:17:42.14:545,42,0	1/1:0,17:17:39.13:506,39,0	1/1:0,22:22:45.15:584,45,0	1/1:0,15:15:39.13:506,39,0	1/1:0,14:13:39.13:506,39,0	1/1:1,10:10:30.10:389,30,0	1/1:1,12:11:33.08:399,33,0	1/1:0,25:25:66.21:856,66,0	1/1:0,32:32:87.28:1129,87,0	0/0:39,0:39:99:0,108,1618	0/0:20,0:20:57.18:0,57,834	0/0:25,0:25:57.19:0,57,851	1/1:0,11:11:24.08:311,24,0	1/1:1,30:31:87.28:1126,87,0	1/1:0,38:37:93:1207,93,0	1/1:0,24:24:51.17:662,51,0
chr10	60710219	.	TA	T	18034.20	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-2.064;DP=522;FS=9.355;HRun=2;HaplotypeScore=56.0397;InbreedingCoeff=0.9353;MQ=75.81;MQ0=0;MQRankSum=-7.552;QD=36.21;ReadPosRankSum=5.199;VQSLOD=4.7270;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,17:17:48.16:623,48,0	1/1:0,11:11:30.10:389,30,0	0/0:14,0:14:6.41:0,6,532	0/0:10,0:10:20.80:0,21,221	1/1:0,24:24:72.23:935,72,0	1/1:1,24:25:69.22:896,69,0	1/1:0,12:12:30.10:390,30,0	1/1:1,24:25:72.23:934,72,0	1/1:0,18:18:45.15:584,45,0	1/1:0,32:32:93.27:1177,93,0	1/1:0,23:23:66.21:856,66,0	1/1:0,10:10:30.10:390,30,0	1/1:1,13:14:36.12:467,36,0	1/1:0,10:10:30.10:389,30,0	1/1:1,15:16:45.15:584,45,0	1/1:0,15:15:42.14:545,42,0	1/1:0,16:16:48.16:623,48,0	1/1:0,10:10:27.09:351,27,0	1/1:0,15:15:45.15:582,45,0	1/1:2,27:29:78.25:1013,78,0	1/1:0,28:28:72.23:935,72,0	1/1:1,24:25:69.22:891,69,0	1/1:0,22:22:54.18:701,54,0	1/1:0,6:6:15.05:194,15,0	1/1:1,12:13:33.11:428,33,0	1/1:0,24:24:72.23:935,72,0	1/1:0,38:38:99:1441,111,0	1/1:0,20:20:60.20:779,60,0
chr10	60714359	.	C	CT	18108.58	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-8.717;DP=555;FS=4.405;HRun=5;HaplotypeScore=45.6017;InbreedingCoeff=0.9963;MQ=83.07;MQ0=0;MQRankSum=-9.603;QD=35.03;ReadPosRankSum=5.609;VQSLOD=4.3483;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,14:15:42.14:553,42,0	1/1:1,10:11:27.09:355,27,0	0/0:26,0:26:66.09:0,66,687	0/0:12,0:12:33.07:0,33,343	1/1:3,22:25:63.16:809,63,0	1/1:1,18:19:42.14:553,42,0	1/1:0,7:7:21.07:276,21,0	1/1:3,18:21:54.17:697,54,0	1/1:1,25:26:69.22:908,69,0	1/1:0,24:24:72.23:947,72,0	1/1:0,23:23:69.22:908,69,0	1/1:1,10:11:30.10:395,30,0	1/1:2,12:14:36.12:474,36,0	1/1:0,19:19:48.16:631,48,0	1/1:0,13:13:33.11:434,33,0	1/1:2,12:14:33.11:434,33,0	1/1:0,18:18:51.14:653,51,0	1/1:0,15:15:42.14:552,42,0	1/1:2,16:18:48.14:616,48,0	1/1:2,40:42:99:1500,117,0	1/1:1,21:22:63.20:829,63,0	1/1:0,26:26:75.24:986,75,0	1/1:1,29:30:78.25:1026,78,0	1/1:2,14:16:36.12:474,36,0	1/1:0,10:10:30.10:395,30,0	1/1:2,25:27:75.23:973,75,0	1/1:3,22:25:60.19:781,60,0	1/1:0,26:26:72.23:947,72,0
chr10	60716550	.	T	TTG	24458.11	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-15.790;DP=618;FS=0.693;HRun=0;HaplotypeScore=61.4383;InbreedingCoeff=0.9992;MQ=85.87;MQ0=1;MQRankSum=-4.524;QD=54.23;ReadPosRankSum=6.319;VQSLOD=5.2588;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,28:29:81.28:1645,81,0	1/1:0,12:13:33:670,33,0	0/0:17,0:17:48.16:0,48,759	0/0:22,0:22:62.80:0,63,979	1/1:0,24:24:72.25:1462,72,0	0/0:25,0:25:72.25:0,72,1174	0/0:14,0:14:39.13:0,39,636	0/0:27,0:27:81.26:0,81,1276	1/1:1,24:25:63.22:1280,63,0	1/1:1,28:29:84.28:1660,84,0	1/1:1,30:31:87.25:1702,87,0	1/1:0,16:16:42.14:853,42,0	1/1:0,16:16:45.15:914,45,0	1/1:0,16:17:51.18:1029,51,0	1/1:0,26:29:69.24:1402,69,0	1/1:0,16:15:39.13:792,39,0	1/1:0,17:17:45.15:914,45,0	1/1:1,8:9:21.07:416,21,0	1/1:0,15:16:45.15:915,45,0	1/1:1,32:34:90.31:1829,90,0	1/1:0,30:30:84.29:1707,84,0	0/0:28,0:28:81.28:0,81,1319	0/0:11,0:11:33.10:0,33,511	0/0:23,0:23:69.24:0,69,1125	1/1:0,17:17:45.15:914,45,0	1/1:1,30:32:93.31:1855,93,0	1/1:2,34:35:87.30:1767,87,0	1/1:2,12:14:36.12:731,36,0
chr10	60718362	.	A	AT	429.37	PASS	AC=24;AF=0.857;AN=28;BaseQRankSum=3.901;DP=144;FS=30.053;HRun=0;HaplotypeScore=12.3457;InbreedingCoeff=0.3284;MQ=61.01;MQ0=22;MQRankSum=-3.771;QD=8.42;ReadPosRankSum=0.013;VQSLOD=1.6053;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	1/1:1,0:1:3:25,3,0	0/0:22,0:14:39.11:0,39,523	0/0:24,0:17:45.62:0,46,625	1/1:1,4:3:3.01:42,3,0	1/1:0,2:1:3.01:43,3,0	./.	./.	1/1:0,2:2:3.01:43,3,0	1/1:4,2:1:3:27,3,0	1/1:1,4:4:3.01:36,3,0	./.	./.	./.	./.	./.	./.	./.	1/1:3,5:1:2.98:21,3,0	1/1:0,3:3:3.01:42,3,0	./.	1/1:0,4:3:3.01:42,3,0	./.	./.	1/1:0,3:3:9.03:127,9,0	1/1:2,7:2:3.01:43,3,0	./.	1/1:0,3:2:3.01:43,3,0
chr10	60749928	.	TCC	T	441.40	PASS	AC=20;AF=0.833;AN=24;BaseQRankSum=4.397;DP=37;FS=7.666;HRun=3;HaplotypeScore=17.4603;InbreedingCoeff=0.4186;MQ=132.58;MQ0=0;MQRankSum=-4.365;QD=29.43;ReadPosRankSum=-4.008;VQSLOD=0.7083;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	1/1:1,0:1:3.01:46,3,0	0/0:11,0:11:33.11:0,33,597	0/0:11,0:11:33:0,33,560	1/1:1,0:1:3.01:39,3,0	./.	./.	1/1:1,0:1:3.01:34,3,0	./.	1/1:1,1:2:6.02:92,6,0	1/1:1,0:1:3.01:39,3,0	./.	1/1:1,0:1:3.01:37,3,0	./.	1/1:3,1:4:9.02:99,9,0	./.	./.	./.	1/1:1,0:1:3.01:46,3,0	./.	1/1:0,1:1:2.99:24,3,0	./.	./.	./.	./.	1/1:0,2:2:6.02:89,6,0	./.	./.
chr10	60749978	.	C	CT	9221.23	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-2.708;DP=285;FS=1.897;HRun=2;HaplotypeScore=36.7402;InbreedingCoeff=0.7957;MQ=53.02;MQ0=0;MQRankSum=-1.446;QD=33.41;ReadPosRankSum=2.018;VQSLOD=4.4543;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,8:8:24.08:345,24,0	1/1:0,5:5:15.05:215,15,0	0/0:5,0:5:6:0,6,61	0/0:4,0:2:2.98:0,3,23	1/1:1,11:11:30.10:424,30,0	1/1:11,0:11:32.94:266,33,0	1/1:11,0:11:32.94:267,33,0	1/1:20,0:21:62.60:505,63,0	1/1:0,8:8:15.01:192,15,0	1/1:0,15:15:45.15:647,45,0	1/1:0,12:12:30.10:425,30,0	1/1:0,11:11:30.10:430,30,0	1/1:0,12:12:30.06:406,30,0	1/1:0,7:7:21.07:297,21,0	1/1:0,10:10:30.10:430,30,0	1/1:1,7:8:21.07:301,21,0	1/1:2,10:13:30.10:430,30,0	1/1:0,8:8:21.07:301,21,0	1/1:0,10:10:27.08:370,27,0	1/1:2,16:16:34.23:592,34,0	1/1:0,6:6:18.06:258,18,0	1/1:7,0:7:17.96:144,18,0	1/1:11,0:11:29.94:240,30,0	1/1:10,0:10:17.97:146,18,0	1/1:1,10:10:30.10:431,30,0	1/1:0,9:9:27.09:388,27,0	1/1:1,13:13:36.03:470,36,0	1/1:0,8:8:21.07:302,21,0
chr10	60749980	.	T	TTA	6224.35	PASS	AB=1.000;AC=51;AF=0.911;AN=56;BaseQRankSum=-0.441;DP=292;FS=3.101;HRun=0;HaplotypeScore=53.1109;InbreedingCoeff=0.5776;MQ=52.51;MQ0=0;MQRankSum=-2.110;QD=21.99;ReadPosRankSum=4.070;VQSLOD=4.7500;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,0:8:22.73:113,23,0	1/1:6,0:6:14.20:70,14,0	0/0:5,0:4:6.02:0,6,79	0/0:4,0:2:2.64:0,3,16	1/1:13,0:12:11.23:144,11,0	1/1:0,11:11:33.11:664,33,0	1/1:0,11:11:33.11:665,33,0	1/1:0,21:23:69.15:1071,69,0	1/1:8,0:8:12.25:59,12,0	1/1:15,0:15:42.61:213,43,0	1/1:12,0:12:28.58:164,29,0	1/1:12,0:12:28.41:141,28,0	1/1:14,0:14:5.90:104,6,0	1/1:7,0:7:20.05:123,20,0	1/1:10,0:10:28.41:141,28,0	0/1:8,0:8:2.49:76,0,2	1/1:13,0:13:28.41:141,28,0	1/1:8,0:8:19.89:99,20,0	1/1:9,0:9:25.57:139,26,0	1/1:17,0:16:8.73:160,9,0	1/1:6,0:6:17.04:84,17,0	1/1:1,7:8:21.07:394,21,0	1/1:0,12:12:30.10:603,30,0	1/1:0,11:11:18.06:363,18,0	1/1:10,0:10:28.41:141,28,0	1/1:9,0:9:25.57:128,26,0	1/1:14,0:13:12.83:125,13,0	1/1:8,0:8:19.89:99,20,0
chr10	60750114	.	GC	G	2781.75	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=2.597;DP=459;FS=0.959;HRun=3;HaplotypeScore=63.4134;InbreedingCoeff=0.9720;MQ=51.31;MQ0=3;MQRankSum=-0.854;QD=29.59;ReadPosRankSum=0.039;VQSLOD=2.9360;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:87.29:0,87,1250	0/0:6,0:6:18.06:0,18,259	0/0:19,0:9:25.63:0,26,343	0/0:10,0:7:13.99:0,14,203	0/0:25,0:25:66.22:0,66,932	1/1:0,17:17:51.16:631,51,0	1/1:0,12:12:33.10:409,33,0	1/1:0,14:11:30.09:369,30,0	0/0:16,0:16:39.13:0,39,554	0/0:22,0:22:66.22:0,66,945	0/0:21,0:21:54.14:0,54,744	0/0:15,0:15:42.02:0,42,586	0/0:11,0:11:30.09:0,30,411	0/0:10,0:10:30.10:0,30,422	0/0:20,0:20:57.15:0,57,789	0/0:11,0:11:27.09:0,27,388	0/0:30,0:30:90.30:0,90,1290	0/0:15,0:15:39.09:0,39,538	0/0:13,0:12:27.09:0,27,386	0/0:19,0:19:57.17:0,57,787	0/0:28,0:28:78.26:0,78,1121	1/1:0,10:10:27.08:334,27,0	1/1:1,15:16:36.11:446,36,0	1/1:0,25:25:63.20:780,63,0	0/0:13,0:13:30.10:0,30,430	0/0:10,0:10:30.09:0,30,415	0/0:15,0:14:36.02:0,36,498	0/0:2,0:2:6.02:0,6,84
chr10	60751313	.	A	AT	11360.42	PASS	AB=0.938;AC=41;AF=0.732;AN=56;BaseQRankSum=-12.919;DP=584;FS=4.589;HRun=8;HaplotypeScore=51.4196;InbreedingCoeff=0.9360;MQ=62.94;MQ0=2;MQRankSum=-1.134;QD=26.24;ReadPosRankSum=0.347;VQSLOD=5.5363;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,17:21:51.15:589,51,0	1/1:7,10:17:30.09:346,30,0	0/0:19,0:16:38.59:0,39,321	0/1:14,1:9:0.71:1,0,71	1/1:3,36:39:96.24:1093,96,0	0/0:30,0:30:81.03:0,81,741	0/0:11,0:11:29.95:0,30,266	1/1:5,23:28:72.19:810,72,0	0/0:17,0:17:18.38:0,18,333	1/1:2,19:21:54.01:593,54,0	1/1:2,24:26:66.20:762,66,0	1/1:0,14:14:39.11:450,39,0	1/1:3,12:15:27.08:312,27,0	1/1:4,19:23:51.15:589,51,0	1/1:2,25:27:63.19:727,63,0	1/1:0,9:9:24.07:277,24,0	1/1:1,19:20:45.13:519,45,0	1/1:1,8:9:24.07:277,24,0	1/1:3,11:14:8.64:353,9,0	1/1:4,21:25:60.14:676,60,0	1/1:1,16:17:48.14:554,48,0	0/0:35,0:35:87.03:0,87,796	0/0:32,0:32:84.03:0,84,764	0/0:7,0:7:15:0,15,137	1/1:7,21:28:60.18:693,60,0	1/1:4,22:26:66.18:750,66,0	1/1:7,15:22:39.10:438,39,0	1/1:0,17:17:48.14:554,48,0
chr10	60752510	.	GT	G	12586.47	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=0.975;DP=668;FS=11.216;HRun=9;HaplotypeScore=68.2593;InbreedingCoeff=0.9599;MQ=55.67;MQ0=7;MQRankSum=-0.458;QD=19.64;ReadPosRankSum=4.231;VQSLOD=4.6281;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,49:52:99:906,99,0	1/1:0,10:10:27.01:247,27,0	0/0:17,0:12:23.44:0,23,313	0/0:10,0:9:18.03:0,18,193	1/1:3,30:32:69.03:631,69,0	1/1:1,24:25:54.03:494,54,0	1/1:3,11:14:27.01:247,27,0	1/1:6,23:26:69.02:628,69,0	1/1:0,29:29:56.95:511,57,0	1/1:4,36:40:99:982,108,0	1/1:3,22:25:45.01:412,45,0	1/1:3,15:18:36.02:329,36,0	1/1:1,8:9:18.01:165,18,0	1/1:2,21:23:47.83:439,48,0	1/1:2,24:26:56.94:511,57,0	1/1:0,17:17:45.02:412,45,0	1/1:6,26:32:60.03:549,60,0	1/1:1,23:24:57.03:522,57,0	1/1:5,22:25:66.01:596,66,0	1/1:3,26:29:63.01:576,63,0	1/1:4,26:30:72.03:659,72,0	1/1:3,20:23:51.02:467,51,0	1/1:2,17:19:42.02:384,42,0	1/1:2,17:19:30.01:274,30,0	1/1:1,30:31:54.02:494,54,0	1/1:3,17:20:51.01:467,51,0	1/1:4,27:31:66.02:604,66,0	1/1:0,4:4:9:82,9,0
chr10	60753227	.	CTT	C	15537.45	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-0.237;DP=632;FS=1.163;HRun=8;HaplotypeScore=78.7914;InbreedingCoeff=0.9746;MQ=54.29;MQ0=11;MQRankSum=1.508;QD=26.51;ReadPosRankSum=4.184;VQSLOD=4.5425;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,25:28:60.18:729,60,0	1/1:1,8:9:21.06:256,21,0	0/0:27,0:6:12.04:0,12,164	0/0:16,0:9:21.03:0,21,312	1/1:3,32:34:66.18:805,66,0	1/1:0,18:18:51.16:622,51,0	1/1:1,16:17:42.13:508,42,0	1/1:5,23:11:18.03:208,18,0	1/1:3,17:20:41.50:484,41,0	1/1:1,32:32:90.23:1095,90,0	1/1:1,24:25:57.17:695,57,0	1/1:1,16:16:39.12:474,39,0	1/1:0,19:19:45.14:546,45,0	1/1:2,14:16:39.12:476,39,0	1/1:2,22:24:60.19:729,60,0	1/1:3,17:20:48.15:586,48,0	1/1:0,24:23:57.18:695,57,0	1/1:2,16:18:36.11:439,36,0	1/1:5,14:17:42.13:512,42,0	1/1:5,29:31:63.19:768,63,0	1/1:3,28:31:72.21:878,72,0	1/1:1,25:26:66.21:805,66,0	1/1:2,20:21:45.14:549,45,0	1/1:3,13:15:32.46:374,32,0	1/1:1,20:20:42.13:512,42,0	1/1:4,22:26:69.16:803,69,0	1/1:4,23:26:54.05:659,54,0	1/1:0,9:9:27.08:329,27,0
chr10	60758882	.	C	CT	949.64	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-7.596;DP=626;FS=2.553;HRun=4;HaplotypeScore=62.9632;InbreedingCoeff=0.9369;MQ=67.25;MQ0=0;MQRankSum=0.051;QD=30.63;ReadPosRankSum=-3.951;VQSLOD=2.0246;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,150,1696	0/0:7,0:7:18.05:0,18,204	0/0:26,0:25:71.32:0,71,757	0/0:27,0:24:53.64:0,54,663	0/0:26,0:26:75.21:0,75,850	0/0:15,0:15:42.12:0,42,476	0/0:11,0:11:30.07:0,30,330	1/1:4,27:31:78.20:1044,78,0	0/0:17,0:17:48.14:0,48,544	0/0:25,0:25:72.21:0,72,816	0/0:10,0:10:29.67:0,30,316	0/0:13,0:13:39.11:0,39,442	0/0:18,0:18:48.14:0,48,544	0/0:20,0:20:57.16:0,57,646	0/0:25,0:25:69.18:0,69,774	0/0:28,0:28:81.23:0,81,918	0/0:31,0:31:87.25:0,87,986	0/0:19,0:19:45.12:0,45,510	0/0:28,0:29:77.23:0,77,840	0/0:24,0:24:60.17:0,60,681	0/0:35,0:35:99:0,99,1112	0/0:18,0:18:48.14:0,48,544	0/0:14,0:14:36.09:0,36,398	0/0:14,0:14:42.12:0,42,476	0/0:26,0:26:75.18:0,75,832	0/0:24,0:24:72.20:0,72,808	0/0:38,0:38:99:0,105,1181	0/0:3,0:3:9.03:0,9,102
chr10	60759534	.	G	GA	695.09	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-6.215;DP=572;FS=0.000;HRun=7;HaplotypeScore=53.9446;InbreedingCoeff=0.9780;MQ=82.55;MQ0=0;MQRankSum=-0.880;QD=20.44;ReadPosRankSum=-4.660;VQSLOD=1.8500;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:81.07:0,81,768	0/0:10,0:10:27.04:0,27,261	0/0:17,0:17:34.58:0,35,310	0/0:14,0:14:31.28:0,31,289	0/0:25,0:25:54.08:0,54,521	0/0:26,0:26:78.08:0,78,735	0/0:12,0:12:30.04:0,30,289	1/1:11,23:34:69.13:790,69,0	0/0:23,1:24:66.10:0,66,637	0/0:27,0:27:60.09:0,60,579	0/0:20,0:20:48.04:0,48,455	0/0:20,0:20:45.07:0,45,434	0/0:21,0:21:60.10:0,60,579	0/0:17,0:17:51.06:0,51,481	0/0:16,0:15:42.04:0,42,396	0/0:16,0:16:42.06:0,42,401	0/0:12,0:12:36.03:0,36,340	0/0:5,0:5:14.98:0,15,135	0/0:28,0:28:78.11:0,78,748	0/0:31,0:31:87.14:0,87,840	0/0:22,0:22:60.08:0,60,574	0/0:20,0:20:60.10:0,60,578	0/0:26,0:26:75.08:0,75,712	0/0:16,0:16:39.06:0,39,376	0/0:21,0:21:60.10:0,60,579	0/0:20,0:20:54.08:0,54,518	0/0:31,0:31:90.13:0,90,863	0/0:8,0:8:21.03:0,21,202
chr10	60763199	.	C	CA	1910.41	PASS	AB=0.695;AC=10;AF=0.179;AN=56;BaseQRankSum=-8.117;DP=561;FS=13.482;HRun=10;HaplotypeScore=63.8184;InbreedingCoeff=0.6794;MQ=60.83;MQ0=5;MQRankSum=0.919;QD=17.85;ReadPosRankSum=1.501;VQSLOD=3.2291;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,2:45:67.55:0,68,724	0/0:9,0:9:20.97:0,21,172	0/0:6,0:8:8.64:0,9,73	0/0:14,0:13:4.37:0,4,166	0/0:14,1:17:8.05:0,8,248	0/1:2,14:16:7.18:342,0,7	1/1:4,7:10:18.05:192,18,0	0/0:26,0:24:44.92:0,45,369	0/0:17,0:19:46.96:0,47,371	0/0:23,1:23:18.92:0,19,359	0/0:24,1:27:23:0,23,374	0/0:19,0:19:44.93:0,45,369	0/0:15,1:16:0.92:0,1,210	0/0:25,1:26:24.90:0,25,411	0/0:25,1:26:18.94:0,19,362	0/0:24,0:24:53.89:0,54,440	0/0:16,0:16:44.94:0,45,369	0/1:5,1:6:17.01:17,0,83	0/0:19,0:17:35.89:0,36,289	0/0:28,0:29:70.43:0,70,557	0/0:12,0:12:23.97:0,24,197	1/1:5,18:23:48.04:497,48,0	1/1:3,24:29:29.63:485,30,0	1/1:4,18:22:51.13:544,51,0	0/0:20,0:20:25.23:0,25,409	0/0:27,0:26:56.91:0,57,468	0/0:21,0:19:50.77:0,51,418	0/0:10,0:9:20.95:0,21,169
chr10	60763880	.	TA	T	443.76	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.750;DP=478;FS=0.000;HRun=8;HaplotypeScore=47.2262;InbreedingCoeff=0.8357;MQ=57.60;MQ0=5;MQRankSum=-3.865;QD=15.30;ReadPosRankSum=-3.511;VQSLOD=2.4580;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:47.88:0,48,526	0/0:7,0:7:15.05:0,15,181	0/0:4,0:4:5.60:0,6,103	0/0:9,0:3:8.98:0,9,89	0/0:25,0:24:60.12:0,60,684	0/0:18,0:18:48.15:0,48,580	0/0:15,0:15:45.14:0,45,544	1/1:4,25:26:57.05:538,57,0	0/0:17,0:17:48.12:0,48,557	0/0:27,0:25:66.18:0,66,770	0/0:26,0:26:75.12:0,75,833	0/0:19,0:19:54.16:0,54,642	0/0:10,0:10:23.88:0,24,279	0/0:12,0:12:30.08:0,30,350	0/0:9,0:9:27.07:0,27,316	0/0:9,0:9:27.05:0,27,302	0/0:17,0:16:39.12:0,39,471	0/0:18,0:18:48.05:0,48,545	0/0:24,0:20:57.15:0,57,658	0/0:35,0:35:99:0,99,1186	0/0:11,0:11:33.08:0,33,384	0/0:18,0:18:51.16:0,51,616	0/0:22,0:21:54.17:0,54,652	0/0:9,0:9:24.07:0,24,290	0/0:16,0:16:42.09:0,42,475	0/0:16,0:15:36.11:0,36,435	0/0:29,0:29:81.25:0,81,978	0/0:11,0:11:30.09:0,30,362
chr10	60764153	.	G	GC	21987.35	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-0.706;DP=603;FS=1.446;HRun=0;HaplotypeScore=95.6981;InbreedingCoeff=0.9773;MQ=60.46;MQ0=1;MQRankSum=1.855;QD=39.19;ReadPosRankSum=6.077;VQSLOD=4.8101;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,25:24:54.14:858,54,0	1/1:0,6:6:18.06:288,18,0	0/0:19,0:14:42.14:0,42,577	0/0:23,0:19:50.96:0,51,652	1/1:0,25:22:60.20:954,60,0	1/1:0,21:21:57.19:911,57,0	1/1:1,9:10:12.04:191,12,0	1/1:2,28:28:81.19:1236,81,0	1/1:1,19:18:54.18:862,54,0	1/1:4,24:25:66.20:1019,66,0	1/1:2,32:31:81.28:1294,81,0	1/1:3,32:35:87.30:1389,87,0	1/1:0,26:24:66.23:1054,66,0	1/1:1,21:21:60.20:958,60,0	1/1:1,11:12:33.11:527,33,0	1/1:0,21:19:44.90:719,45,0	1/1:0,16:16:39.13:623,39,0	1/1:0,14:14:39.09:594,39,0	1/1:3,19:21:25.52:875,26,0	1/1:1,31:31:84.29:1342,84,0	1/1:1,22:23:60.20:958,60,0	1/1:0,14:13:24.08:383,24,0	1/1:1,21:19:48.16:767,48,0	1/1:0,14:13:33.11:527,33,0	1/1:0,22:21:60.20:959,60,0	1/1:0,24:19:57.18:885,57,0	1/1:0,33:32:90.31:1430,90,0	1/1:0,8:8:24.08:383,24,0
chr10	60765905	.	A	AC	23581.93	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-4.333;DP=662;FS=8.532;HRun=0;HaplotypeScore=72.6602;InbreedingCoeff=0.9777;MQ=77.34;MQ0=6;MQRankSum=-8.242;QD=37.79;ReadPosRankSum=5.371;VQSLOD=4.5904;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,36:36:93.23:1454,93,0	1/1:0,9:8:18.06:287,18,0	0/0:13,0:11:33.10:0,33,441	0/0:25,0:22:58.94:0,59,669	1/1:1,25:24:66.15:1000,66,0	1/1:0,28:28:75.19:1168,75,0	1/1:1,29:21:57.19:910,57,0	1/1:2,32:24:66.19:1001,66,0	1/1:0,28:25:66.02:964,66,0	1/1:1,37:35:99:1458,99,0	1/1:0,15:14:33.11:515,33,0	1/1:0,16:14:33.11:527,33,0	1/1:0,23:21:54.18:862,54,0	1/1:0,26:24:57.19:910,57,0	1/1:1,23:23:54.18:863,54,0	1/1:0,25:25:66.23:1054,66,0	1/1:0,21:21:60.20:957,60,0	1/1:0,9:9:21.07:335,21,0	1/1:1,12:12:30.10:477,30,0	1/1:0,32:29:81.19:1263,81,0	1/1:0,30:30:81.21:1264,81,0	1/1:0,27:22:54.18:851,54,0	1/1:0,29:27:72.14:1146,72,0	1/1:0,20:19:48.16:766,48,0	1/1:0,30:29:69.10:1042,69,0	1/1:0,25:24:72.22:1117,72,0	1/1:0,26:26:75.26:1198,75,0	1/1:0,4:4:12.04:192,12,0
chr10	60766245	.	AATG	A	19170.60	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=1.575;DP=730;FS=1.740;HRun=0;HaplotypeScore=110.4147;InbreedingCoeff=0.9545;MQ=62.41;MQ0=0;MQRankSum=-5.457;QD=28.32;ReadPosRankSum=5.904;VQSLOD=5.0171;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,53:58:99:1934,135,0	1/1:2,4:6:12.04:164,12,0	0/0:22,0:21:27.09:0,27,519	0/0:31,0:30:42.14:0,42,802	1/1:11,27:38:78.26:1117,78,0	1/1:4,21:25:60.20:852,60,0	1/1:9,19:27:42.14:602,42,0	1/1:14,13:26:36.11:482,36,0	1/1:8,19:27:45.15:644,45,0	1/1:6,18:24:54.18:773,54,0	1/1:1,18:18:45.15:645,45,0	1/1:5,19:24:54.18:773,54,0	1/1:6,24:30:69.16:944,69,0	1/1:12,14:26:27.09:387,27,0	1/1:3,23:26:66.22:938,66,0	1/1:8,28:36:63.07:894,63,0	1/1:6,20:26:51.17:730,51,0	1/1:2,13:15:33.11:473,33,0	1/1:12,11:23:33.09:452,33,0	1/1:7,24:31:72.20:994,72,0	1/1:4,41:45:99:1461,102,0	1/1:8,15:23:39.07:527,39,0	1/1:6,15:21:39.13:559,39,0	1/1:3,17:20:45.15:645,45,0	1/1:10,20:30:54.18:773,54,0	1/1:6,14:20:42.14:599,42,0	1/1:7,18:25:48.16:682,48,0	1/1:0,4:4:9.03:129,9,0
chr10	60768380	.	GAC	G	14120.76	PASS	AB=0.560;AC=39;AF=0.696;AN=56;BaseQRankSum=6.268;DP=842;FS=11.387;HRun=0;HaplotypeScore=108.0287;InbreedingCoeff=0.9512;MQ=63.10;MQ0=18;MQRankSum=1.667;QD=26.05;ReadPosRankSum=6.654;VQSLOD=5.4327;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,24:28:60.14:743,60,0	1/1:2,10:12:26.55:310,27,0	0/0:72,0:32:32.95:0,33,550	0/0:62,0:31:48.96:0,49,585	1/1:8,31:39:87.27:1078,87,0	0/0:29,0:29:60.20:0,60,975	0/0:39,0:39:43.99:0,44,1210	0/0:5,0:18:32.57:0,33,255	1/1:5,27:32:75.71:931,76,0	1/1:6,25:31:75.22:903,75,0	1/1:2,23:26:66.04:794,66,0	1/1:3,26:28:54.17:669,54,0	1/1:4,23:27:66.21:818,66,0	1/1:8,21:28:48.15:595,48,0	1/1:6,23:29:54:646,54,0	1/1:4,26:30:60.19:744,60,0	1/1:1,17:18:36.11:446,36,0	0/1:3,11:14:0.09:265,0,0	1/1:9,10:19:30.09:364,30,0	1/1:2,30:32:69.22:855,69,0	1/1:11,42:53:99:1315,108,0	0/0:29,1:30:50.09:0,50,1304	0/0:24,0:24:57.19:0,57,899	0/0:26,0:25:62.48:0,62,953	1/1:3,28:32:73.10:936,73,0	1/1:2,22:24:69.05:829,69,0	1/1:5,25:30:60.16:728,60,0	1/1:0,5:5:12.04:149,12,0
chr10	60769135	.	AG	A	8104.10	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=12.396;DP=485;FS=0.751;HRun=1;HaplotypeScore=179.9271;InbreedingCoeff=0.9364;MQ=80.41;MQ0=0;MQRankSum=-13.007;QD=25.25;ReadPosRankSum=3.767;VQSLOD=4.7918;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,3:6:17.99:170,18,0	1/1:0,5:5:15.02:138,15,0	0/0:16,0:16:47.91:0,48,679	0/0:25,0:25:65.08:0,65,870	1/1:1,15:16:42.87:373,43,0	0/0:23,0:23:66.22:0,66,1016	0/0:18,0:18:48.15:0,48,679	0/0:18,0:18:54.18:0,54,843	1/1:1,29:30:90.08:821,90,0	1/1:1,19:20:59.86:558,60,0	1/1:1,21:22:56.76:467,57,0	1/1:0,13:13:38.97:345,39,0	1/1:3,20:23:63.05:582,63,0	1/1:3,17:20:58.55:504,59,0	1/1:2,23:25:69.04:614,69,0	1/1:2,14:16:45.06:438,45,0	1/1:0,9:9:27.02:245,27,0	1/1:0,1:1:3:29,3,0	1/1:5,11:16:47.77:482,48,0	1/1:7,20:27:59.87:516,60,0	1/1:1,2:3:3:27,3,0	0/0:27,0:27:78.26:0,78,1181	0/0:30,0:30:69.20:0,69,1058	0/0:7,0:7:18.06:0,18,280	1/1:2,17:19:50.97:445,51,0	1/1:1,18:19:57.09:546,57,0	1/1:4,21:25:66.50:610,66,0	1/1:2,4:6:18.04:196,18,0
chr10	60769138	.	C	CCTCCA	39781	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=1.427;DP=573;FS=3.957;HRun=0;HaplotypeScore=142.7120;InbreedingCoeff=0.8429;MQ=75.90;MQ0=0;MQRankSum=-10.265;QD=74.78;ReadPosRankSum=5.509;VQSLOD=6.4227;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,3:7:9.03:247,9,0	1/1:4,5:9:21.05:522,21,0	0/0:17,0:17:46.97:0,47,966	0/0:24,0:24:64.59:0,65,1391	1/1:7,14:21:51.16:1333,51,0	1/1:4,19:25:63.22:2034,63,0	1/1:2,15:19:51.18:1631,51,0	1/1:12,14:28:78.27:2305,78,0	1/1:5,30:35:99:2867,105,0	1/1:4,19:23:66.22:1774,66,0	1/1:7,17:24:63.21:1621,63,0	1/1:4,12:16:48.16:1261,48,0	1/1:7,20:30:84.27:2258,84,0	1/1:3,18:23:66.23:1800,66,0	1/1:3,23:28:78.27:2153,78,0	1/1:4,13:19:54.17:1443,54,0	1/1:1,9:10:30.10:781,30,0	1/1:1,1:2:6.02:168,6,0	1/1:7,11:20:60.21:1680,60,0	1/1:10,20:30:72.25:1876,72,0	1/1:3,2:5:3.01:81,3,0	1/1:4,26:33:81.28:2555,81,0	1/1:9,24:34:78.16:2517,78,0	1/1:4,6:11:24.08:733,24,0	1/1:4,17:21:63.22:1705,63,0	1/1:6,18:24:72.20:1905,72,0	1/1:8,20:29:84.27:2151,84,0	1/1:2,4:6:18.01:379,18,0
chr10	60771509	.	TGA	T	3781.61	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=11.547;DP=636;FS=2.503;HRun=0;HaplotypeScore=71.3214;InbreedingCoeff=0.9691;MQ=58.78;MQ0=4;MQRankSum=1.733;QD=36.36;ReadPosRankSum=0.609;VQSLOD=5.8600;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,114,2026	0/0:4,0:4:12.03:0,12,190	0/0:30,0:18:51.15:0,51,811	0/0:25,0:22:57.19:0,57,971	0/0:21,0:21:63.22:0,63,1139	1/1:3,20:23:51.17:731,51,0	1/1:1,22:23:63.21:903,63,0	0/0:20,0:20:54.19:0,54,988	0/0:28,0:28:78.24:0,78,1369	0/0:33,0:33:96.31:0,96,1680	0/0:19,0:19:57.18:0,57,1015	0/0:29,0:29:84.26:0,84,1470	0/0:21,0:21:63.22:0,63,1154	0/0:27,0:27:81.26:0,81,1454	0/0:22,0:22:66.20:0,66,1150	0/0:23,0:23:66.22:0,66,1169	0/0:25,0:25:72.23:0,72,1280	0/0:16,0:16:45.11:0,45,790	0/0:21,0:20:51.16:0,51,896	0/0:21,0:21:60.19:0,60,1071	0/0:16,0:16:48.16:0,48,870	1/1:0,18:18:48.16:688,48,0	1/1:0,23:23:63.21:902,63,0	1/1:1,16:17:39.13:559,39,0	0/0:31,0:31:87.30:0,87,1584	0/0:29,0:29:81.27:0,81,1444	0/0:29,0:29:75.26:0,75,1358	0/0:2,0:2:6.02:0,6,110
chr10	60773056	.	AT	A	13249.49	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=17.295;DP=602;FS=1.073;HRun=4;HaplotypeScore=92.2000;InbreedingCoeff=0.9996;MQ=78.30;MQ0=0;MQRankSum=-4.151;QD=31.25;ReadPosRankSum=5.221;VQSLOD=4.8736;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,15:19:42.10:478,42,0	1/1:0,11:11:30.09:349,30,0	0/0:20,0:20:60.20:0,60,821	0/0:15,0:14:35.79:0,36,457	1/1:0,24:24:62.06:730,62,0	0/0:22,0:22:63.21:0,63,881	0/0:19,0:19:57.17:0,57,780	0/0:33,0:33:87.27:0,87,1188	1/1:2,20:22:54.16:629,54,0	1/1:0,36:36:99:1244,108,0	1/1:0,23:23:69.20:800,69,0	1/1:0,12:12:36.11:420,36,0	1/1:2,21:23:61.06:699,61,0	1/1:1,21:22:60.18:701,60,0	1/1:1,23:24:66.20:771,66,0	1/1:1,21:22:36.19:607,36,0	1/1:1,13:14:39.12:454,39,0	1/1:1,13:14:27.04:302,27,0	1/1:0,13:13:39.12:458,39,0	1/1:0,32:32:96.20:1104,96,0	1/1:0,19:19:48.14:559,48,0	0/0:28,0:28:78.25:0,78,1077	0/0:21,0:21:63.20:0,63,866	0/0:20,0:20:54.18:0,54,755	1/1:1,25:26:72.21:841,72,0	1/1:2,21:23:63.16:724,63,0	1/1:5,26:30:81.64:924,82,0	1/1:0,14:14:39.12:454,39,0
chr10	60775403	.	A	AT	20033.19	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-9.602;DP=588;FS=11.049;HRun=2;HaplotypeScore=49.3030;InbreedingCoeff=0.9837;MQ=78.99;MQ0=0;MQRankSum=-4.692;QD=38.38;ReadPosRankSum=7.760;VQSLOD=3.4476;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,13:13:33.11:475,33,0	1/1:0,12:12:36.08:495,36,0	0/0:18,0:18:48.49:0,48,573	0/0:13,0:13:35.85:0,36,420	1/1:0,24:24:72.05:937,72,0	1/1:1,22:23:60.20:864,60,0	1/1:0,9:9:24.08:346,24,0	0/0:35,0:35:99:0,102,1193	1/1:2,8:10:21.07:302,21,0	1/1:1,25:26:78.24:1100,78,0	1/1:1,28:29:84.11:1136,84,0	1/1:0,21:21:57.19:821,57,0	1/1:0,24:24:69.23:992,69,0	1/1:2,20:22:57.19:820,57,0	1/1:2,11:13:30.10:432,30,0	1/1:0,20:20:57.19:821,57,0	1/1:0,19:19:51.17:734,51,0	1/1:1,11:12:18.06:259,18,0	1/1:0,26:26:78.26:1123,78,0	1/1:4,27:31:78.26:1109,78,0	1/1:0,14:14:39.13:562,39,0	1/1:1,24:25:72.20:1013,72,0	1/1:0,28:28:78.18:1092,78,0	1/1:0,13:13:33.11:475,33,0	1/1:2,34:36:93.31:1339,93,0	1/1:0,29:29:87.28:1231,87,0	1/1:1,37:38:96.32:1382,96,0	1/1:1,4:5:12.04:173,12,0
chr10	60776425	.	TAA	T	17595.96	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=13.966;DP=523;FS=4.608;HRun=2;HaplotypeScore=89.4834;InbreedingCoeff=0.9874;MQ=82.69;MQ0=0;MQRankSum=-3.440;QD=44.32;ReadPosRankSum=6.564;VQSLOD=4.6029;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,21:21:57.19:929,57,0	1/1:0,11:11:24.08:391,24,0	0/0:20,0:20:57.67:0,58,1110	0/0:10,0:9:27.09:0,27,484	1/1:0,36:36:99:1677,105,0	0/0:19,0:19:57.18:0,57,1120	0/0:13,0:13:39.13:0,39,792	0/0:26,0:26:78.22:0,78,1453	1/1:0,21:21:57.19:929,57,0	1/1:0,31:31:93.30:1488,93,0	1/1:0,19:19:51.17:817,51,0	1/1:0,15:15:39.13:635,39,0	1/1:0,26:26:60.20:978,60,0	1/1:0,16:16:36.12:587,36,0	1/1:0,18:18:48.16:782,48,0	1/1:0,27:27:69.24:1125,69,0	1/1:0,8:8:21.07:342,21,0	1/1:0,13:13:36.12:586,36,0	1/1:0,18:17:51.14:781,51,0	1/1:0,26:26:78.26:1247,78,0	1/1:0,6:6:18.06:293,18,0	0/0:8,0:8:24.08:0,24,488	0/0:17,0:17:51.18:0,51,1035	0/0:13,0:13:39.13:0,39,792	1/1:0,33:33:96.33:1565,96,0	1/1:0,25:25:75.26:1220,75,0	1/1:0,24:24:66.23:1075,66,0	1/1:0,3:3:9.03:147,9,0
chr10	60778186	.	TAACTC	T	5687.38	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-1.681;DP=555;FS=6.306;HRun=0;HaplotypeScore=135.6708;InbreedingCoeff=0.9784;MQ=91.71;MQ0=1;MQRankSum=-5.333;QD=58.03;ReadPosRankSum=3.744;VQSLOD=5.5499;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:57.20:0,57,1809	0/0:4,0:4:12.04:0,12,400	0/0:24,0:23:69.24:0,69,2076	0/0:25,0:25:72.22:0,72,1868	0/0:35,0:35:99:0,105,3343	1/1:0,42:42:99:2498,111,0	1/1:0,13:13:36.12:837,36,0	0/0:33,0:33:99:0,99,3043	0/0:13,0:13:39.13:0,39,1267	0/0:29,0:29:87.28:0,87,2750	0/0:18,0:18:54.16:0,54,1646	0/0:16,0:16:48.16:0,48,1537	0/0:20,0:20:60.21:0,60,1948	0/0:20,0:20:60.18:0,60,1848	0/0:23,0:23:69.23:0,69,2126	0/0:23,0:23:69.24:0,69,2201	0/0:19,0:19:54.19:0,54,1589	0/0:7,0:7:21.07:0,21,699	0/0:26,0:26:75.24:0,75,2134	0/0:23,0:23:69.24:0,69,2208	0/0:14,0:13:39.12:0,39,1192	1/1:0,12:12:30.07:649,30,0	1/1:0,17:17:41.65:962,42,0	1/1:0,14:14:33.11:741,33,0	0/0:16,0:16:48.16:0,48,1467	0/0:21,0:21:63.20:0,63,2025	0/0:26,0:26:78.27:0,78,2437	0/0:3,0:3:9.03:0,9,299
chr10	60779828	.	T	TATCA	35979.73	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-6.664;DP=650;FS=9.590;HRun=0;HaplotypeScore=93.7272;InbreedingCoeff=0.9868;MQ=72.70;MQ0=1;MQRankSum=-10.465;QD=59.87;ReadPosRankSum=5.235;VQSLOD=6.4842;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,21:23:60.21:1578,60,0	1/1:0,8:8:15.03:396,15,0	0/0:22,0:22:47.32:0,47,873	0/0:27,0:27:77.61:0,78,1275	1/1:3,22:28:60.16:1491,60,0	1/1:4,13:18:36.12:951,36,0	1/1:2,15:19:42.14:1108,42,0	1/1:7,31:41:99:2676,114,0	1/1:3,21:24:60.21:1583,60,0	1/1:3,19:24:66.18:1523,66,0	1/1:5,23:27:66.11:1560,66,0	1/1:1,18:19:48.16:1266,48,0	1/1:3,22:28:54.19:1420,54,0	1/1:2,23:25:60.21:1584,60,0	1/1:0,25:27:66.23:1740,66,0	1/1:1,28:32:66.08:1724,66,0	1/1:2,18:21:33.58:870,34,0	1/1:1,9:10:30.10:771,30,0	1/1:4,21:25:66.21:1519,66,0	1/1:3,18:21:54.19:1421,54,0	1/1:3,13:16:39.13:1029,39,0	1/1:5,29:34:81.17:2012,81,0	1/1:3,26:29:72.14:1894,72,0	1/1:1,20:21:48.16:1267,48,0	1/1:5,11:15:27.09:713,27,0	1/1:1,20:23:66.21:1668,66,0	1/1:5,25:32:66.23:1739,66,0	1/1:0,7:7:18.06:475,18,0
chr10	60781216	.	T	TG	19271.87	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-6.804;DP=518;FS=10.048;HRun=0;HaplotypeScore=48.7653;InbreedingCoeff=0.9984;MQ=71.99;MQ0=0;MQRankSum=-4.718;QD=40.15;ReadPosRankSum=5.942;VQSLOD=4.2977;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,32:33:87.28:1273,87,0	1/1:0,8:8:24.08:359,24,0	0/0:13,0:13:36.06:0,36,464	0/0:11,0:11:33.01:0,33,388	1/1:0,31:31:93.31:1383,93,0	1/1:3,12:15:45.11:630,45,0	1/1:0,20:20:57.19:851,57,0	0/0:14,0:14:42.12:0,42,542	1/1:0,16:16:36.12:539,36,0	1/1:0,19:19:57.16:809,57,0	1/1:0,19:19:57.19:843,57,0	1/1:0,12:12:33.11:493,33,0	1/1:0,13:13:33.11:494,33,0	1/1:0,13:13:36.12:539,36,0	1/1:0,17:17:51.17:763,51,0	1/1:0,18:17:45.15:674,45,0	1/1:0,35:35:96.33:1436,96,0	1/1:0,12:12:33.11:485,33,0	1/1:3,10:13:36.12:522,36,0	1/1:0,25:25:69.23:1032,69,0	1/1:0,15:15:42.14:628,42,0	1/1:1,13:14:38.92:506,39,0	1/1:0,29:29:81.27:1212,81,0	1/1:0,13:13:33.11:484,33,0	1/1:0,20:19:48.16:719,48,0	1/1:1,22:23:66.22:986,66,0	1/1:0,31:31:78.18:1166,78,0	1/1:0,16:16:30.10:448,30,0
chr10	60781290	.	AT	A	452.07	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=3.774;DP=464;FS=0.000;HRun=9;HaplotypeScore=89.2487;InbreedingCoeff=0.8483;MQ=69.24;MQ0=8;MQRankSum=-0.851;QD=10.51;ReadPosRankSum=0.330;VQSLOD=2.6479;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:87.11:0,87,948	0/0:2,0:2:6.01:0,6,65	0/0:31,0:10:23.57:0,24,175	0/0:37,0:16:0.94:0,1,102	0/0:19,0:19:54.11:0,54,577	1/1:3,13:16:37.11:287,37,0	1/1:1,5:6:8.99:76,9,0	0/0:35,0:35:96.25:0,96,1078	0/0:12,0:12:27.08:0,27,311	0/0:20,0:20:57.14:0,57,621	0/0:16,0:16:48.11:0,48,518	0/0:12,0:12:32.83:0,33,354	0/0:7,0:7:15:0,15,154	0/0:8,0:8:24.07:0,24,277	0/0:15,0:15:42.12:0,42,474	0/0:8,0:8:15.03:0,15,164	0/0:28,0:28:60.16:0,60,669	0/0:12,0:12:32.96:0,33,348	0/0:16,0:16:39.10:0,39,426	0/0:18,0:19:51.03:0,51,549	0/0:8,0:8:18.05:0,18,208	1/1:1,2:3:5:47,5,0	1/1:10,4:14:22.94:153,23,0	1/1:3,1:4:8.42:48,8,0	0/0:24,0:23:56.30:0,56,613	0/0:23,0:23:48.12:0,48,529	0/0:24,0:24:60.16:0,60,670	0/0:9,0:9:12.04:0,12,138
chr10	60781301	.	A	AT	574.11	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=-5.509;DP=430;FS=2.717;HRun=9;HaplotypeScore=79.7382;InbreedingCoeff=0.5075;MQ=66.64;MQ0=11;MQRankSum=0.411;QD=15.11;ReadPosRankSum=-3.666;VQSLOD=3.2617;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:49.63:0,50,598	0/0:2,0:2:2.99:0,3,25	0/0:31,0:10:8.40:0,8,94	0/0:31,0:12:10.87:0,11,82	0/0:18,0:18:41.96:0,42,359	0/0:14,0:14:26.99:0,27,96	0/0:4,0:4:7.65:0,8,30	1/1:10,21:31:43.06:668,43,0	0/0:11,0:11:27.47:0,27,235	0/0:22,0:22:47.34:0,47,397	0/0:16,0:16:29.48:0,29,243	0/0:12,0:12:26.98:0,27,234	0/1:6,0:6:0.87:1,0,86	0/0:8,0:8:24:0,24,208	0/0:15,0:15:38.99:0,39,337	0/0:6,0:6:14.99:0,15,127	0/0:25,0:25:50.75:0,51,432	0/0:12,0:12:32.96:0,33,281	0/0:18,0:17:35.97:0,36,310	0/0:15,0:15:32.77:0,33,285	0/0:7,0:7:20.74:0,21,168	0/0:3,0:3:7.73:0,8,29	0/0:10,0:10:13.71:0,14,62	0/0:4,0:4:5.11:0,5,20	0/0:23,0:22:35.87:0,36,416	0/0:20,0:20:35.15:0,35,395	0/0:23,0:22:54.44:0,54,468	0/0:10,0:10:17.52:0,18,133
chr10	60782257	.	CT	C	702.74	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-3.901;DP=515;FS=9.271;HRun=8;HaplotypeScore=79.5369;InbreedingCoeff=0.9627;MQ=77.57;MQ0=0;MQRankSum=0.673;QD=21.96;ReadPosRankSum=-4.738;VQSLOD=1.5478;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:24.07:0,24,290	0/0:12,0:12:30.09:0,30,362	0/0:16,0:16:45.09:0,45,508	0/0:10,0:10:29.88:0,30,296	0/0:24,0:24:63.19:0,63,759	0/0:27,0:27:78.24:0,78,942	0/0:8,0:8:21.06:0,21,254	1/1:4,28:32:84.09:798,84,0	0/0:15,0:15:36.11:0,36,435	0/0:24,0:25:66.07:0,66,776	0/0:29,0:29:78.24:0,78,942	0/0:15,0:15:42.13:0,42,505	0/0:18,0:18:48.11:0,48,553	0/0:15,0:15:42.13:0,42,507	0/0:16,0:16:48.15:0,48,580	0/0:13,0:13:39.12:0,39,471	0/0:16,0:16:36.11:0,36,435	0/0:13,0:13:36.11:0,36,435	0/0:18,0:18:33.06:0,33,382	0/0:39,0:39:99:0,102,1228	0/0:6,0:6:12.04:0,12,145	0/0:17,0:17:45.14:0,45,544	0/0:22,0:22:57.17:0,57,679	0/0:17,0:17:48.15:0,48,580	0/0:20,0:20:54.17:0,54,652	0/0:24,0:24:66.18:0,66,775	0/0:26,0:26:75.23:0,75,906	0/0:12,0:12:35.52:0,36,385
chr10	60782734	.	G	GGA	22416.46	PASS	AB=1.000;AC=53;AF=0.946;AN=56;BaseQRankSum=-3.483;DP=599;FS=1.144;HRun=0;HaplotypeScore=96.6529;InbreedingCoeff=0.6338;MQ=67.59;MQ0=0;MQRankSum=-3.759;QD=38.19;ReadPosRankSum=4.025;VQSLOD=7.1346;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,21:23:48.16:832,48,0	1/1:1,10:12:33.11:551,33,0	0/0:12,0:11:20.21:0,20,194	0/1:10,0:9:30.07:30,0,71	1/1:2,26:28:66.10:1071,66,0	1/1:2,24:26:54.18:923,54,0	1/1:2,14:16:20.64:460,21,0	1/1:2,0:21:50.94:524,51,0	1/1:1,33:35:90.04:1518,90,0	1/1:1,17:18:51.12:802,51,0	1/1:2,23:26:68.96:1017,69,0	1/1:2,18:20:45.15:775,45,0	1/1:3,19:23:54.13:907,54,0	1/1:1,20:23:47.88:760,48,0	1/1:2,26:29:69.10:1163,69,0	1/1:3,27:30:81.27:1367,81,0	1/1:0,24:24:51.17:886,51,0	1/1:0,11:12:27.07:438,27,0	1/1:7,18:25:60.13:911,60,0	1/1:2,20:22:54.13:861,54,0	1/1:0,19:20:48.16:816,48,0	1/1:1,15:16:42.14:717,42,0	1/1:2,18:20:39.13:661,39,0	1/1:3,15:19:39.13:658,39,0	1/1:2,15:18:45.15:755,45,0	1/1:1,27:29:84.23:1334,84,0	1/1:3,34:37:90.31:1559,90,0	1/1:5,0:5:14.97:121,15,0
chr10	60785256	.	TTTC	T	48.69	PASS	AB=0.942;AC=10;AF=0.179;AN=56;BaseQRankSum=-0.171;DP=264;FS=1.100;HRun=0;HaplotypeScore=50.4849;InbreedingCoeff=-0.2108;MQ=62.16;MQ0=9;MQRankSum=-0.771;QD=0.62;ReadPosRankSum=-5.023;VQSLOD=0.3575;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:14,1:13:13.91:14,0,271	0/1:2,0:2:25.31:25,0,32	0/1:22,0:8:2.11:2,0,58	0/0:21,0:11:6.67:0,7,149	0/0:12,0:12:23.99:0,24,278	0/0:6,0:6:12.04:0,12,169	0/0:4,0:3:8.06:0,8,81	0/0:32,0:30:78.17:0,78,835	0/1:6,0:5:7.90:8,0,121	0/0:5,0:5:15.05:0,15,184	0/0:7,0:7:11.07:0,11,136	0/0:6,0:6:15.05:0,15,265	0/1:1,1:2:7.91:33,0,8	0/0:7,0:7:8.37:0,8,150	0/0:6,0:6:15.05:0,15,206	0/1:5,0:5:9.66:10,0,119	0/0:14,0:14:30.09:0,30,403	0/0:11,0:11:5.93:0,6,261	0/0:14,0:13:5.17:0,5,401	0/0:17,0:16:5.21:0,5,340	0/1:3,0:3:0.01:0,0,63	0/1:4,0:4:19.70:20,0,54	0/0:6,0:6:6.02:0,6,75	0/0:2,0:2:2.97:0,3,20	0/1:10,0:9:8.52:9,0,131	0/1:7,2:6:54.68:55,0,136	0/0:11,0:9:21.05:0,21,287	0/0:4,0:4:4.80:0,5,45
chr10	60785259	.	C	CTTTT	4736.61	PASS	AB=0.637;AC=48;AF=0.889;AN=54;BaseQRankSum=-5.742;DP=272;FS=17.818;HRun=10;HaplotypeScore=40.6655;InbreedingCoeff=0.2830;MQ=59.94;MQ0=9;MQRankSum=0.528;QD=20.59;ReadPosRankSum=1.159;VQSLOD=1.2774;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:10,2:13:20.99:321,21,0	1/1:1,0:2:5.93:48,6,0	0/0:22,0:8:3.70:0,4,21	0/0:18,0:9:2.78:0,3,22	1/1:1,10:13:19.20:410,19,0	1/1:1,0:6:9.03:111,9,0	1/1:1,0:3:9.03:129,9,0	0/1:17,0:32:5.95:6,0,19	1/1:2,3:5:8.99:112,9,0	1/1:0,5:5:15.05:299,15,0	1/1:1,7:8:8.99:161,9,0	1/1:5,1:6:3.01:71,3,0	1/1:2,0:2:3.01:39,3,0	1/1:4,3:7:4.57:74,5,0	1/1:3,1:6:8.94:125,9,0	1/1:1,3:5:12.04:248,12,0	1/1:2,12:15:24.08:530,24,0	1/1:5,7:12:6.12:342,6,0	1/1:8,8:15:24:373,24,0	0/1:6,11:16:18.49:336,0,18	1/1:2,2:5:9.03:178,9,0	1/1:1,0:4:11.91:106,12,0	1/1:1,0:7:5.93:54,6,0	./.	1/1:4,5:9:9.03:211,9,0	1/1:8,0:6:18.03:238,18,0	1/1:6,5:9:9.03:212,9,0	1/1:4,0:4:0.89:2,1,0
chr10	60787026	.	C	CT	1569.63	PASS	AC=10;AF=0.185;AN=54;BaseQRankSum=-1.223;DP=503;FS=0.574;HRun=6;HaplotypeScore=184.0748;InbreedingCoeff=0.8387;MQ=38.23;MQ0=5;MQRankSum=0.661;QD=16.35;ReadPosRankSum=-0.377;VQSLOD=1.5736;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:7:9.02:0,9,92	0/0:12,0:12:21.04:0,21,213	0/0:10,0:2:6:0,6,54	./.	0/0:36,0:36:60.11:0,60,602	1/1:1,26:26:42.07:488,42,0	1/1:2,8:8:15.05:185,15,0	0/0:10,0:5:6:0,6,61	0/0:25,0:25:51.11:0,51,520	0/0:23,0:23:57.12:0,57,575	0/0:22,0:22:42.09:0,42,427	0/0:12,0:12:24.05:0,24,244	0/0:26,0:25:54.06:0,54,530	0/0:16,0:16:36.06:0,36,360	0/0:26,0:25:51.11:0,51,519	0/0:24,0:24:48.03:0,48,464	0/0:6,0:5:6.01:0,6,61	0/0:6,0:6:8.05:0,8,67	0/0:17,0:12:27.02:0,27,264	0/0:31,0:31:66.12:0,66,662	0/0:4,0:4:9.02:0,9,92	1/1:8,22:30:51.15:613,51,0	1/1:5,15:20:30.09:372,30,0	1/1:2,7:9:6.02:75,6,0	0/0:18,0:18:27.05:0,27,274	0/0:28,0:27:63.13:0,63,637	0/0:38,0:38:90.17:0,90,904	0/0:2,0:2:6.01:0,6,61
chr10	60787056	.	T	TG	11595.65	PASS	AC=52;AF=0.963;AN=54;BaseQRankSum=-1.388;DP=405;FS=0.000;HRun=0;HaplotypeScore=75.1377;InbreedingCoeff=0.4103;MQ=31.16;MQ0=5;MQRankSum=-1.732;QD=28.99;ReadPosRankSum=0.729;VQSLOD=4.9916;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,5:4:11.97:149,12,0	1/1:1,7:7:8.96:111,9,0	0/0:4,0:2:2.98:0,3,23	./.	1/1:0,19:19:39.13:613,39,0	1/1:0,24:24:45.09:681,45,0	1/1:1,9:10:24.03:352,24,0	1/1:1,11:10:30.07:451,30,0	1/1:0,29:28:48.16:761,48,0	1/1:1,16:17:45.15:716,45,0	1/1:0,14:14:24.08:380,24,0	1/1:0,15:15:27.09:416,27,0	1/1:0,27:26:57.19:901,57,0	1/1:1,13:15:23.97:358,24,0	1/1:0,21:20:33.11:524,33,0	1/1:0,25:25:39.13:619,39,0	1/1:2,7:9:9.03:143,9,0	1/1:0,6:5:9.03:143,9,0	1/1:2,8:7:18.06:285,18,0	1/1:1,25:25:54.11:790,54,0	1/1:1,3:3:3.01:48,3,0	1/1:0,7:7:18.06:284,18,0	1/1:2,15:17:18.06:283,18,0	1/1:0,6:6:5.93:64,6,0	1/1:0,13:13:21:304,21,0	1/1:1,19:19:51.17:800,51,0	1/1:0,40:40:87.30:1373,87,0	1/1:0,1:1:3.01:48,3,0
chr10	60788036	.	GT	G	6893.50	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=12.123;DP=407;FS=11.969;HRun=8;HaplotypeScore=65.2946;InbreedingCoeff=0.9420;MQ=55.18;MQ0=2;MQRankSum=-0.883;QD=23.69;ReadPosRankSum=3.348;VQSLOD=4.9411;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,18:21:18.10:449,18,0	1/1:0,2:2:6.01:58,6,0	0/0:14,0:7:15.04:0,15,178	0/0:6,0:5:9.03:0,9,109	1/1:3,25:28:72.11:695,72,0	0/0:21,0:21:60.18:0,60,725	0/0:8,0:8:18.04:0,18,205	0/0:28,0:28:57.17:0,57,689	1/1:1,19:20:51.08:492,51,0	1/1:2,17:19:51.05:485,51,0	1/1:2,20:22:57.08:550,57,0	1/1:0,7:7:15.02:145,15,0	1/1:1,14:15:36.06:347,36,0	1/1:0,8:8:18.03:173,18,0	1/1:0,6:6:18.03:174,18,0	1/1:2,13:15:39.06:377,39,0	1/1:1,17:18:44.60:458,45,0	1/1:1,12:13:33.05:319,33,0	1/1:3,9:12:27.03:261,27,0	1/1:3,19:22:51.07:492,51,0	1/1:1,7:8:18.03:174,18,0	0/0:6,0:6:18.06:0,18,217	0/0:16,0:16:42.12:0,42,496	0/0:17,0:17:48.15:0,48,580	1/1:1,11:12:27.04:261,27,0	1/1:2,16:18:48.08:463,48,0	1/1:3,16:19:48.07:464,48,0	1/1:4,2:6:6.01:58,6,0
chr10	60788162	.	CATTTATAT	C	12410.27	PASS	AB=0.889;AC=47;AF=0.839;AN=56;BaseQRankSum=-0.322;DP=354;FS=2.951;HRun=0;HaplotypeScore=103.6435;InbreedingCoeff=0.4996;MQ=56.27;MQ0=0;MQRankSum=-4.657;QD=38.54;ReadPosRankSum=3.667;VQSLOD=4.2566;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,10:12:12.04:329,12,0	1/1:1,9:10:17.92:306,18,0	0/0:5,0:5:14.76:0,15,227	0/0:3,0:2:3.01:0,3,54	1/1:3,25:28:57.04:1268,57,0	0/1:20,0:20:4.64:5,0,1033	1/1:1,0:1:3:27,3,0	0/0:24,0:24:63.11:0,63,1338	1/1:0,12:12:21.07:576,21,0	1/1:3,17:20:51.49:939,51,0	1/1:1,18:19:44.85:797,45,0	1/1:2,9:11:15.05:412,15,0	1/1:1,7:8:9.03:247,9,0	1/1:3,11:14:21.07:551,21,0	1/1:0,6:6:15.05:411,15,0	1/1:2,13:15:24.08:659,24,0	1/1:0,10:10:6.02:165,6,0	0/1:1,1:2:5.29:77,0,5	1/1:4,12:16:36.03:700,36,0	1/1:4,25:28:63.01:1361,63,0	1/1:0,5:5:5.98:102,6,0	1/1:3,0:3:9:80,9,0	1/1:8,0:8:15.01:135,15,0	0/1:6,0:6:35.85:36,0,213	1/1:0,18:18:45.15:1193,45,0	1/1:1,18:19:51.13:1142,51,0	1/1:0,22:22:24.08:659,24,0	1/1:6,2:8:14.98:236,15,0
chr10	60788167	.	A	ATT	461.41	PASS	AB=0.893;AC=5;AF=0.089;AN=56;BaseQRankSum=-5.516;DP=324;FS=7.762;HRun=3;HaplotypeScore=108.5076;InbreedingCoeff=0.1198;MQ=54.63;MQ0=0;MQRankSum=4.844;QD=13.98;ReadPosRankSum=-1.047;VQSLOD=-0.0311;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:10.98:0,11,49	0/0:9,0:9:14.13:0,14,76	0/0:5,0:5:15.05:0,15,218	0/0:2,0:1:3.01:0,3,46	0/0:25,0:25:29.81:0,30,216	0/1:8,11:19:30.71:432,0,31	0/1:1,0:1:0:0,0,0	0/0:27,0:27:66.78:0,67,728	0/0:12,0:12:19.21:0,19,85	0/0:18,0:18:42.49:0,42,220	0/0:18,0:18:39.95:0,40,234	0/0:9,0:9:13.72:0,14,61	0/0:7,0:7:8.23:0,8,36	0/0:12,0:12:16.47:0,16,73	0/0:6,0:6:13.72:0,14,61	0/0:13,0:13:21.96:0,22,97	0/0:10,0:10:5.49:0,5,24	0/0:2,0:2:5.65:0,6,28	0/0:12,0:12:30.67:0,31,159	0/0:25,0:24:49.40:0,49,245	0/0:5,0:5:5.73:0,6,35	0/1:3,0:3:15.27:15,0,21	0/1:5,0:5:12.40:12,0,48	0/1:4,1:5:0.99:106,0,1	0/0:18,0:18:41.41:0,41,191	0/0:18,0:18:18.56:0,19,169	0/0:22,0:22:21.96:0,22,97	0/0:5,0:5:7.09:0,7,45
chr10	60788514	.	G	GT	12591.38	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-10.267;DP=581;FS=3.335;HRun=7;HaplotypeScore=54.4913;InbreedingCoeff=0.9377;MQ=61.84;MQ0=3;MQRankSum=4.329;QD=30.71;ReadPosRankSum=2.996;VQSLOD=5.1115;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,40:44:99:1370,114,0	1/1:1,6:7:18.05:217,18,0	0/0:27,1:19:0.84:0,1,265	0/0:24,0:14:5.55:0,6,234	1/1:0,24:25:65.94:773,66,0	0/0:25,0:25:63.09:0,63,608	0/0:16,0:16:39.05:0,39,371	0/0:31,0:31:78.07:0,78,737	1/1:0,20:20:54.17:652,54,0	1/1:2,14:16:48.12:561,48,0	1/1:1,12:13:36.11:433,36,0	1/1:2,11:13:27.07:326,27,0	1/1:0,13:13:36.11:435,36,0	1/1:3,13:16:36.11:430,36,0	1/1:1,26:27:69.21:834,69,0	1/1:2,23:25:66.20:797,66,0	1/1:5,24:28:66.20:797,66,0	1/1:0,19:19:51.16:616,51,0	1/1:1,15:16:45.10:526,45,0	1/1:0,20:20:54.12:635,54,0	1/1:5,27:32:81.25:978,81,0	0/0:17,0:17:42.07:0,42,406	0/0:11,0:10:27.04:0,27,261	0/0:19,0:19:51.08:0,51,492	1/1:3,20:23:51.16:616,51,0	1/1:3,15:18:45.14:544,45,0	1/1:1,23:24:63.19:761,63,0	1/1:1,9:10:24.07:290,24,0
chr10	60790158	.	GTTTTTT	G	7397.75	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=7.707;DP=437;FS=2.811;HRun=15;HaplotypeScore=178.3105;InbreedingCoeff=0.8875;MQ=57.64;MQ0=3;MQRankSum=-6.992;QD=27.10;ReadPosRankSum=6.441;VQSLOD=1.5374;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,4:13:1.38:47,1,0	1/1:0,6:6:18.06:241,18,0	0/0:37,0:13:26.70:0,27,378	0/0:28,0:15:17.58:0,18,295	1/1:9,22:31:67.48:827,67,0	0/0:20,0:20:49.53:0,50,373	0/0:7,0:7:20.84:0,21,152	0/0:28,0:28:60.20:0,60,1475	0/0:5,0:11:4.50:0,4,27	1/1:4,15:19:45.59:648,46,0	1/1:1,10:11:30.09:385,30,0	1/1:3,6:9:24.02:290,24,0	1/1:2,9:11:30.06:369,30,0	1/1:5,15:19:47.99:586,48,0	1/1:2,11:13:36.10:469,36,0	1/1:5,3:8:11.97:152,12,0	1/1:7,3:10:10.94:125,11,0	1/1:5,7:12:20.47:282,20,0	1/1:6,13:20:35.60:569,36,0	1/1:7,11:18:20.37:479,20,0	1/1:1,5:6:11.99:142,12,0	0/0:11,0:11:29.89:0,30,256	0/0:16,0:16:41.84:0,42,362	0/0:5,0:5:8.96:0,9,68	1/1:7,8:15:23.23:315,23,0	1/1:6,12:19:34:525,34,0	1/1:7,22:29:72.49:905,72,0	1/1:1,1:2:3:42,3,0
chr10	60790171	.	TTTA	T	7262.56	PASS	AB=1.000;AC=49;AF=0.875;AN=56;BaseQRankSum=6.580;DP=440;FS=10.013;HRun=0;HaplotypeScore=167.8703;InbreedingCoeff=0.4712;MQ=56.16;MQ0=2;MQRankSum=-5.074;QD=19.58;ReadPosRankSum=7.224;VQSLOD=3.1500;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:11:10.31:58,10,0	1/1:7,0:7:18.49:171,18,0	0/0:38,1:13:26.56:0,27,303	0/0:30,0:15:24.33:0,24,237	1/1:28,0:28:53.08:588,53,0	1/1:4,12:16:44.88:580,45,0	1/1:2,4:6:14.94:181,15,0	0/1:29,0:27:17.40:17,0,176	1/1:11,0:11:26.61:213,27,0	1/1:24,0:24:42.98:464,43,0	1/1:14,0:14:41.08:335,41,0	1/1:8,0:8:23.36:192,23,0	1/1:10,0:10:29.71:267,30,0	1/1:19,0:18:47.42:447,47,0	1/1:15,0:15:44.27:375,44,0	1/1:10,0:10:9.57:152,10,0	1/1:15,0:15:28.43:188,28,0	1/1:10,0:10:9.05:178,9,0	1/1:23,0:22:11.04:370,11,0	1/1:14,0:14:36.03:337,36,0	0/1:8,0:8:0.85:91,0,1	1/1:3,8:11:26.93:312,27,0	1/1:6,9:15:38.82:408,39,0	1/1:3,3:6:8:147,8,0	1/1:10,0:10:8.75:209,9,0	0/1:21,0:21:16.84:347,0,17	1/1:28,0:26:36.98:592,37,0	1/1:2,0:2:5.68:40,6,0
chr10	60790172	.	TTA	T	5770.35	PASS	AB=1.000;AC=49;AF=0.875;AN=56;BaseQRankSum=5.209;DP=437;FS=12.280;HRun=0;HaplotypeScore=166.0411;InbreedingCoeff=0.4149;MQ=57.42;MQ0=2;MQRankSum=-5.403;QD=15.68;ReadPosRankSum=7.592;VQSLOD=3.7124;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:11:10.70:54,11,0	1/1:7,0:7:18.40:137,18,0	0/0:37,0:12:8.63:0,9,237	0/0:31,0:16:25.93:0,26,202	1/1:28,0:28:51.82:473,52,0	1/1:16,0:16:44.73:375,45,0	1/1:5,1:6:14.90:120,15,0	0/1:28,0:26:39.87:108,0,40	1/1:10,0:10:26.53:179,27,0	1/1:24,0:24:41.99:379,42,0	1/1:14,0:14:41.06:278,41,0	1/1:8,0:8:23.27:158,23,0	1/1:10,0:10:29.58:216,30,0	1/1:18,1:18:47.44:362,47,0	1/1:15,0:15:44.09:307,44,0	1/1:10,0:10:8.35:128,8,0	1/1:15,0:15:28.81:167,29,0	1/1:10,0:10:7.59:143,8,0	1/1:23,0:22:5.62:285,6,0	1/1:14,0:14:36.78:271,37,0	0/1:8,0:8:1.78:74,0,2	1/1:10,1:11:29.68:223,30,0	1/1:12,2:14:37.99:292,38,0	1/1:5,1:6:7.99:101,8,0	1/1:10,0:10:7.67:163,8,0	0/1:21,0:21:22.55:273,0,23	1/1:28,0:26:34.79:469,35,0	1/1:2,0:2:5.67:34,6,0
chr10	60790176	.	T	TG	9144.82	PASS	AB=1.000;AC=48;AF=0.857;AN=56;BaseQRankSum=2.453;DP=410;FS=4.911;HRun=0;HaplotypeScore=146.1089;InbreedingCoeff=0.6280;MQ=59.12;MQ0=2;MQRankSum=-5.076;QD=27.30;ReadPosRankSum=3.613;VQSLOD=4.8482;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,6:8:7.70:148,8,0	1/1:1,7:8:24.05:266,24,0	0/0:31,0:11:21.48:0,21,293	0/0:29,0:15:25.26:0,25,267	1/1:1,26:27:72.13:758,72,0	0/0:15,0:15:15.19:0,15,54	0/1:6,0:6:2.33:6,0,2	0/1:26,0:24:46.35:46,0,117	1/1:0,10:10:30.09:391,30,0	1/1:2,23:25:72.21:934,72,0	1/1:4,14:18:54.01:579,54,0	1/1:1,7:8:22.61:245,23,0	1/1:1,10:11:33:337,33,0	1/1:2,16:18:53.96:586,54,0	1/1:0,15:15:45.11:513,45,0	1/1:0,9:9:27.07:353,27,0	1/1:3,9:12:35.55:452,36,0	1/1:2,9:11:30.05:372,30,0	1/1:0,20:20:47.80:701,48,0	1/1:0,11:11:33.06:335,33,0	1/1:1,8:9:20.98:232,21,0	1/1:10,0:10:1.81:32,2,0	1/1:11,0:11:4.43:44,4,0	1/1:5,1:6:5.98:38,6,0	1/1:0,8:8:24.05:252,24,0	1/1:1,17:18:54.16:665,54,0	1/1:3,24:25:72.13:779,72,0	1/1:0,2:2:6.02:81,6,0
chr10	60790201	.	G	GT	8421.38	PASS	AB=0.675;AC=48;AF=0.857;AN=56;BaseQRankSum=0.300;DP=388;FS=3.038;HRun=9;HaplotypeScore=131.5759;InbreedingCoeff=0.5866;MQ=56.75;MQ0=0;MQRankSum=-4.202;QD=24.13;ReadPosRankSum=2.268;VQSLOD=3.5707;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,8:9:18.05:197,18,0	1/1:2,9:11:27.07:299,27,0	0/0:7,0:5:1.29:0,1,6	0/0:16,0:10:5.66:0,6,40	1/1:9,18:27:51.14:564,51,0	1/1:3,12:14:36.10:398,36,0	1/1:2,1:3:3.01:33,3,0	0/0:2,0:15:21.31:0,21,68	1/1:1,10:11:27.07:299,27,0	1/1:4,20:27:68.68:706,69,0	1/1:1,19:20:54.06:570,54,0	1/1:3,6:9:21:218,21,0	0/1:3,6:9:2.24:187,0,2	1/1:5,14:19:16.06:405,16,0	1/1:2,9:12:29.91:310,30,0	1/1:1,9:10:27.07:298,27,0	1/1:3,11:14:4.03:272,4,0	1/1:0,14:14:42.11:464,42,0	1/1:7,13:18:36.10:397,36,0	1/1:5,11:16:33.56:366,34,0	1/1:2,9:11:24.06:265,24,0	1/1:1,9:11:29.91:313,30,0	1/1:1,6:7:21.06:230,21,0	1/1:1,9:10:24.06:265,24,0	1/1:3,8:11:24.06:263,24,0	1/1:5,15:20:45.12:496,45,0	1/1:8,22:28:11.13:578,11,0	0/1:2,1:3:1.58:28,0,2
chr10	60790433	.	A	AT	1726.14	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-8.109;DP=426;FS=1.856;HRun=6;HaplotypeScore=39.7310;InbreedingCoeff=0.9459;MQ=57.88;MQ0=6;MQRankSum=3.062;QD=29.76;ReadPosRankSum=0.381;VQSLOD=3.8262;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:60.14:0,60,612	0/0:8,0:8:24.05:0,24,245	0/0:6,0:4:5.35:0,5,60	0/0:6,0:5:6.01:0,6,61	0/0:27,0:27:69.14:0,69,696	1/1:1,9:10:27.09:340,27,0	1/1:2,10:12:27.09:340,27,0	0/0:33,0:31:81.12:0,81,807	0/0:11,0:11:30.07:0,30,306	0/0:25,0:25:66.14:0,66,668	0/0:21,0:21:54.12:0,54,550	0/0:13,0:13:39.09:0,39,398	0/0:15,0:15:42.09:0,42,429	0/0:15,0:15:42.09:0,42,428	0/0:13,0:13:33.07:0,33,336	0/0:22,0:22:57.12:0,57,582	0/0:25,0:25:69.11:0,69,692	0/0:8,0:8:24.04:0,24,237	0/0:18,0:16:44.89:0,45,459	0/0:15,0:15:45.10:0,45,458	0/0:12,0:12:33.07:0,33,337	1/1:1,8:9:24.03:284,24,0	1/1:1,16:17:51.16:635,51,0	1/1:0,10:10:24.08:302,24,0	0/0:9,0:9:24.05:0,24,245	0/0:16,0:16:42.09:0,42,428	0/0:19,0:19:57.13:0,57,581	0/0:8,0:7:21.05:0,21,214
chr10	60790938	.	CA	C	4520.38	PASS	AB=0.684;AC=50;AF=0.893;AN=56;BaseQRankSum=-3.424;DP=411;FS=9.033;HRun=12;HaplotypeScore=51.7020;InbreedingCoeff=0.2505;MQ=67.45;MQ0=17;MQRankSum=-1.592;QD=11.77;ReadPosRankSum=2.027;VQSLOD=3.8651;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:10,19:30:5.28:321,0,5	1/1:0,4:4:8.97:70,9,0	0/0:27,0:13:20.51:0,21,161	0/1:27,0:12:4.54:5,0,85	0/1:4,20:25:8.10:296,0,8	1/1:3,12:15:32.87:255,33,0	1/1:3,1:4:5.39:38,5,0	1/1:9,0:30:33.97:107,34,0	1/1:2,11:13:26.89:209,27,0	1/1:5,5:10:14.15:129,14,0	1/1:2,11:14:31.91:238,32,0	1/1:1,9:10:20.92:162,21,0	0/1:4,9:13:3.41:159,0,3	1/1:5,8:12:23.80:179,24,0	1/1:2,14:16:32.87:255,33,0	1/1:1,4:5:8.96:70,9,0	1/1:8,15:23:44.80:348,45,0	1/1:6,8:14:33.14:239,33,0	1/1:7,12:19:4.91:210,5,0	1/1:6,20:27:26.36:358,26,0	1/1:1,1:2:5.98:46,6,0	1/1:0,1:1:2.99:23,3,0	1/1:0,2:2:5.98:46,6,0	1/1:2,8:10:11.92:93,12,0	1/1:3,18:21:41.82:325,42,0	1/1:3,0:12:19.21:55,19,0	1/1:2,13:15:32.86:255,33,0	1/1:2,0:5:10.19:29,10,0
chr10	60791336	.	CA	C	15968.95	PASS	AB=1.000;AC=53;AF=0.946;AN=56;BaseQRankSum=-5.478;DP=619;FS=0.000;HRun=7;HaplotypeScore=61.9957;InbreedingCoeff=0.6941;MQ=83.86;MQ0=0;MQRankSum=-8.388;QD=26.53;ReadPosRankSum=5.172;VQSLOD=5.1172;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,19:20:54.12:551,54,0	1/1:1,12:13:33.07:337,33,0	0/0:16,1:17:10.87:0,11,421	0/1:19,0:19:5.75:6,0,377	1/1:0,33:33:96.22:979,96,0	1/1:0,35:35:99:1041,102,0	1/1:1,14:15:39.09:398,39,0	1/1:3,31:34:93.18:939,93,0	1/1:1,21:22:57.13:581,57,0	1/1:1,27:28:81.18:824,81,0	1/1:0,26:26:69.15:703,69,0	1/1:1,23:24:60.14:612,60,0	1/1:1,34:35:96.11:979,96,0	1/1:1,22:23:66.15:673,66,0	1/1:1,20:21:57.13:582,57,0	1/1:3,24:27:72.16:735,72,0	1/1:1,7:8:21.05:214,21,0	1/1:0,5:5:15.03:153,15,0	1/1:2,7:9:21.02:206,21,0	1/1:2,34:36:99:1003,99,0	1/1:3,18:21:45.10:459,45,0	1/1:1,21:22:63.14:643,63,0	1/1:3,14:17:42.09:428,42,0	1/1:1,18:19:51.11:520,51,0	1/1:2,17:19:42.09:429,42,0	1/1:0,26:26:78.13:780,78,0	1/1:3,34:37:96.22:979,96,0	1/1:0,8:8:21.05:214,21,0
chr10	60842674	.	CA	C	14885.15	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=14.888;DP=551;FS=2.591;HRun=2;HaplotypeScore=87.6791;InbreedingCoeff=0.9990;MQ=82.59;MQ0=0;MQRankSum=-3.988;QD=36.48;ReadPosRankSum=4.406;VQSLOD=5.3564;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,20:20:57.18:736,57,0	1/1:0,9:9:27.09:351,27,0	0/0:16,0:16:45.15:0,45,642	0/0:14,0:14:39.05:0,39,519	1/1:0,25:25:75.24:963,75,0	0/0:21,0:21:60.20:0,60,899	0/0:13,0:13:39.13:0,39,585	0/0:31,0:31:93.31:0,93,1376	1/1:0,15:15:45.15:582,45,0	1/1:0,30:30:90.29:1166,90,0	1/1:0,20:20:60.20:779,60,0	1/1:0,19:19:54.18:700,54,0	1/1:2,22:24:60.19:777,60,0	1/1:2,18:20:48.15:619,48,0	1/1:0,20:20:54.18:701,54,0	1/1:0,17:17:48.16:623,48,0	1/1:1,12:13:39.13:506,39,0	1/1:0,7:7:21.07:273,21,0	1/1:1,12:13:36.12:467,36,0	1/1:0,38:38:99:1285,99,0	1/1:1,23:24:63.20:818,63,0	0/0:18,0:18:51.17:0,51,763	0/0:16,0:16:48.16:0,48,717	0/0:14,0:14:42.14:0,42,627	1/1:1,28:29:84.27:1091,84,0	1/1:0,26:26:78.25:1010,78,0	1/1:0,28:28:78.25:1011,78,0	1/1:0,11:11:33.11:428,33,0
chr10	60843898	.	G	GA	13482.75	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=2.669;DP=434;FS=8.130;HRun=4;HaplotypeScore=82.7508;InbreedingCoeff=0.9514;MQ=73.52;MQ0=0;MQRankSum=-4.333;QD=35.30;ReadPosRankSum=5.498;VQSLOD=4.7284;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,14:16:39.13:533,39,0	1/1:1,3:4:12.04:163,12,0	0/0:8,0:8:21:0,21,211	0/0:7,0:7:11.91:0,12,136	1/1:1,30:32:87.18:1143,87,0	1/1:2,11:13:33.11:451,33,0	1/1:0,5:5:15.05:205,15,0	0/0:37,0:37:99:0,105,1184	1/1:0,8:8:24.08:328,24,0	1/1:2,22:24:66.22:903,66,0	1/1:1,24:25:72.24:985,72,0	1/1:0,15:15:45.15:616,45,0	1/1:2,9:11:24.08:328,24,0	1/1:0,13:13:39.13:533,39,0	1/1:2,17:19:48.16:657,48,0	1/1:0,14:14:42.14:574,42,0	1/1:3,14:17:30.10:410,30,0	1/1:1,22:23:57.15:753,57,0	1/1:2,17:19:51.17:698,51,0	1/1:1,21:22:60.09:776,60,0	1/1:3,6:9:15.05:205,15,0	1/1:0,5:5:12.04:164,12,0	1/1:1,8:10:24.08:325,24,0	1/1:0,9:9:24.08:328,24,0	1/1:1,12:13:33.11:451,33,0	1/1:1,19:20:57.18:764,57,0	1/1:3,18:21:54.18:738,54,0	1/1:3,12:15:32.89:450,33,0
chr10	60845083	.	G	GAA	16690.11	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-11.617;DP=636;FS=3.372;HRun=8;HaplotypeScore=69.3009;InbreedingCoeff=0.9788;MQ=66.72;MQ0=7;MQRankSum=-1.072;QD=36.52;ReadPosRankSum=4.576;VQSLOD=4.9394;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,25:27:60.20:952,60,0	1/1:1,3:4:6.02:95,6,0	0/0:25,0:17:23.09:0,23,316	0/0:32,0:19:24.56:0,25,275	1/1:5,27:32:84.19:1237,84,0	0/0:14,0:14:39.09:0,39,426	0/0:10,0:9:24.05:0,24,268	0/0:30,0:30:78.12:0,78,838	1/1:5,17:21:42.14:665,42,0	1/1:6,28:34:87.26:1327,87,0	1/1:2,19:22:51.17:809,51,0	1/1:1,25:26:72.25:1143,72,0	1/1:1,16:18:44.64:675,45,0	1/1:0,19:20:45.15:695,45,0	1/1:2,14:16:30.10:476,30,0	1/1:2,13:15:33.11:524,33,0	1/1:1,27:29:78.27:1238,78,0	1/1:1,17:18:42.14:666,42,0	1/1:7,15:22:47.65:717,48,0	1/1:3,26:30:77.67:1124,78,0	1/1:2,5:8:15.05:219,15,0	0/0:20,0:20:51.07:0,51,558	0/0:25,0:25:60.13:0,60,660	0/0:21,0:22:41.84:0,42,516	1/1:1,26:28:72.24:1117,72,0	1/1:4,20:25:63.18:955,63,0	1/1:1,31:34:84.29:1333,84,0	1/1:7,17:25:48.15:724,48,0
chr10	60846290	.	A	AT	2728.59	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-13.118;DP=601;FS=0.938;HRun=6;HaplotypeScore=112.9208;InbreedingCoeff=0.9930;MQ=80.96;MQ0=0;MQRankSum=-0.652;QD=31.73;ReadPosRankSum=0.574;VQSLOD=2.5064;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:30.06:0,30,306	0/0:9,0:9:27.05:0,27,269	0/0:22,0:22:45.10:0,45,459	0/0:13,0:13:32.77:0,33,303	0/0:42,0:42:99:0,108,1089	1/1:1,20:21:54.17:679,54,0	1/1:1,8:9:21.07:264,21,0	0/0:32,0:32:81.18:0,81,826	0/0:23,0:23:66.12:0,66,660	0/0:36,0:36:99:0,102,1035	0/0:21,0:21:57.13:0,57,581	0/0:17,0:17:51.10:0,51,513	0/0:27,0:27:72.15:0,72,727	0/0:27,0:27:78.16:0,78,788	0/0:18,0:18:54.11:0,54,544	0/0:20,0:20:57.13:0,57,581	0/0:26,0:26:78.15:0,78,787	0/0:8,0:8:18.04:0,18,183	0/0:15,0:15:42.09:0,42,428	0/0:36,0:36:99:0,105,1051	0/0:21,0:21:60.14:0,60,612	1/1:2,18:20:54.17:679,54,0	1/1:1,18:19:54.17:677,54,0	1/1:0,17:17:48.15:604,48,0	0/0:24,0:24:60.12:0,60,605	0/0:23,0:23:63.14:0,63,643	0/0:38,0:37:99:0,111,1131	0/0:5,0:5:15.03:0,15,153
chr10	60846956	.	T	TAC	267.38	PASS	AC=8;AF=0.80;AN=10;BaseQRankSum=-0.747;DP=121;FS=0.000;HRun=0;HaplotypeScore=14.6734;MQ=25.17;MQ0=89;MQRankSum=0.747;QD=7.43;ReadPosRankSum=0.747;VQSLOD=2.1578;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	0/0:20,0:2:0.56:0,1,4	./.	1/1:0,10:4:9.03:181,9,0	./.	1/1:6,0:1:3.01:35,3,0	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	1/1:6,4:3:3.01:60,3,0	1/1:8,2:2:3.01:60,3,0	./.	./.	./.	./.
chr10	60849204	.	GT	G	129.34	PASS	AC=4;AF=1.00;AN=4;DP=540;FS=0.000;HRun=2;HaplotypeScore=16.5577;MQ=5.18;MQ0=409;QD=4.62;VQSLOD=0.4906;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	1/1:5,11:7:6.02:78,6,0	./.	./.	1/1:4,8:3:9.03:117,9,0	./.	./.	./.	./.	./.
chr10	60851636	.	GGGGA	G	137.50	PASS	AC=8;AF=0.667;AN=12;BaseQRankSum=2.434;DP=118;FS=0.000;HRun=0;HaplotypeScore=11.7268;MQ=13.54;MQ0=84;MQRankSum=-0.962;QD=6.25;ReadPosRankSum=0.170;VQSLOD=0.5913;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	./.	1/1:5,1:1:3.01:53,3,0	1/1:4,1:1:3.01:57,3,0	0/0:17,0:13:36.06:0,36,722	./.	./.	./.	./.	./.	./.	./.	./.	0/0:4,0:1:3.01:0,3,61	./.	./.	./.	./.	1/1:1,3:4:3.01:57,3,0	1/1:4,3:1:3.01:53,3,0	./.	./.	./.	./.	./.
chr10	60851714	.	T	TA	2864.58	PASS	AB=1.000;AC=48;AF=0.889;AN=54;BaseQRankSum=-6.423;DP=253;FS=2.952;HRun=8;HaplotypeScore=193.3755;InbreedingCoeff=0.2987;MQ=46.54;MQ0=19;MQRankSum=1.418;QD=11.79;ReadPosRankSum=-3.659;VQSLOD=0.3428;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:5,0:5:4.80:28,5,0	1/1:7,0:7:2.52:21,3,0	0/0:6,0:5:11.99:0,12,107	0/0:4,0:2:3.47:0,3,28	1/1:18,0:15:6.99:79,7,0	1/1:1,12:12:36.11:415,36,0	1/1:2,5:6:12.04:138,12,0	1/1:7,13:19:36.11:416,36,0	1/1:7,0:7:11.09:71,11,0	1/1:8,0:8:15.14:101,15,0	1/1:6,0:6:3.81:39,4,0	1/1:11,0:11:12.93:101,13,0	1/1:13,0:13:27.03:167,27,0	1/1:9,0:8:9.14:89,9,0	1/1:4,0:3:2.85:17,3,0	1/1:12,0:12:11.95:85,12,0	0/1:8,0:7:13.30:25,0,13	./.	1/1:14,0:12:16.12:160,16,0	1/1:7,0:6:2.33:32,2,0	1/1:8,0:6:4.98:24,5,0	1/1:1,11:11:30.05:331,30,0	1/1:1,8:9:21.01:242,21,0	1/1:1,6:7:15.04:173,15,0	0/1:10,0:7:1.04:26,0,1	1/1:10,0:10:18.29:116,18,0	1/1:11,0:10:1.18:80,1,0	1/1:7,0:3:2.29:6,2,0
chr10	60851716	.	A	AC	3408.77	PASS	AB=0.913;AC=45;AF=0.833;AN=54;BaseQRankSum=2.188;DP=261;FS=15.677;HRun=0;HaplotypeScore=42.6533;InbreedingCoeff=0.2438;MQ=50.17;MQ0=16;MQRankSum=-2.619;QD=13.64;ReadPosRankSum=3.823;VQSLOD=3.4313;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,4:6:7.67:39,8,0	1/1:1,6:7:20.56:139,21,0	0/0:7,0:6:15.01:0,15,174	0/0:4,0:2:6.02:0,6,73	1/1:5,14:16:23.55:182,24,0	1/1:13,0:12:29.46:106,29,0	0/1:6,0:6:19.91:20,0,24	0/1:20,0:19:46.05:46,0,63	1/1:1,7:8:20.52:142,21,0	1/1:0,9:9:26.88:282,27,0	1/1:0,6:6:11.76:90,12,0	1/1:1,10:11:29.35:193,29,0	1/1:1,12:13:35.18:226,35,0	1/1:2,7:8:17.54:101,18,0	1/1:2,2:3:5.93:53,6,0	1/1:2,11:13:35.18:240,35,0	0/1:2,7:8:26.38:82,0,26	./.	1/1:3,12:13:36.03:474,36,0	1/1:1,7:7:17.63:125,18,0	1/1:2,6:6:11.80:93,12,0	1/1:11,0:11:4.26:52,4,0	0/1:9,0:9:5.77:53,0,6	0/1:8,0:8:8.34:31,0,8	1/1:3,6:8:20.51:138,21,0	1/1:0,10:10:29.69:269,30,0	1/1:2,10:11:26.53:197,27,0	1/1:5,2:3:5.88:36,6,0
chr10	60852927	.	G	GA	9644.04	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-9.455;DP=402;FS=6.147;HRun=6;HaplotypeScore=35.2981;InbreedingCoeff=0.9655;MQ=85.29;MQ0=0;MQRankSum=-3.006;QD=32.36;ReadPosRankSum=3.360;VQSLOD=4.7410;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,11:12:33.11:415,33,0	1/1:0,7:7:21.07:264,21,0	0/0:14,0:14:32.38:0,32,295	0/0:13,0:13:23.98:0,24,237	1/1:2,22:24:69.22:864,69,0	0/0:13,0:13:36.08:0,36,367	0/0:11,0:11:27.06:0,27,275	0/0:25,0:25:62.49:0,62,614	1/1:0,7:7:21.07:264,21,0	1/1:1,20:21:60.19:755,60,0	1/1:1,16:17:48.15:604,48,0	1/1:1,13:14:39.12:491,39,0	1/1:1,11:12:36.11:446,36,0	1/1:2,15:17:39.12:490,39,0	1/1:1,12:13:27.09:340,27,0	1/1:3,8:11:18:208,18,0	1/1:1,13:14:33.11:415,33,0	1/1:1,11:12:33.11:415,33,0	1/1:2,21:23:38.60:796,39,0	1/1:3,14:17:36.12:453,36,0	1/1:1,17:18:45.14:566,45,0	0/0:15,0:15:45.10:0,45,459	0/0:6,0:6:18.04:0,18,183	0/0:7,0:7:21.05:0,21,214	1/1:2,11:13:33.11:415,33,0	1/1:2,15:17:45.12:551,45,0	1/1:3,25:28:69.22:855,69,0	1/1:0,1:1:3.01:38,3,0
chr10	60855478	.	C	CTT	19541.77	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-13.055;DP=630;FS=1.047;HRun=1;HaplotypeScore=66.6172;InbreedingCoeff=0.9943;MQ=91.48;MQ0=6;MQRankSum=-6.104;QD=45.66;ReadPosRankSum=5.143;VQSLOD=4.9585;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,25:26:63.17:1178,63,0	1/1:0,6:6:12.04:232,12,0	0/0:25,0:25:75.24:0,75,1084	0/0:30,0:30:72.22:0,72,1053	1/1:2,25:27:69.16:1257,69,0	0/0:30,0:29:81.27:0,81,1237	0/0:13,0:13:36.12:0,36,548	0/0:38,0:38:99:0,114,1705	1/1:0,20:20:51.17:985,51,0	1/1:1,19:21:60.19:1126,60,0	1/1:1,35:38:95.89:1618,96,0	1/1:2,14:16:33.11:637,33,0	1/1:1,21:22:57.20:1100,57,0	1/1:1,16:17:27.05:480,27,0	1/1:0,24:23:63.17:1178,63,0	1/1:2,18:22:48.12:874,48,0	1/1:0,25:24:54.19:1043,54,0	1/1:1,10:10:24.08:464,24,0	1/1:0,16:16:48.14:844,48,0	1/1:1,26:26:75.17:1373,75,0	1/1:0,21:21:57.20:1101,57,0	0/0:26,0:26:75.22:0,75,1099	0/0:25,0:25:72.22:0,72,1055	0/0:15,0:15:42.13:0,42,620	1/1:0,22:22:45.15:869,45,0	1/1:1,21:22:60.19:1101,60,0	1/1:0,26:27:72.25:1388,72,0	1/1:1,16:16:36.12:695,36,0
chr10	60855705	.	ACTATAC	A	10612.47	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=11.099;DP=242;FS=2.493;HRun=0;HaplotypeScore=224.4499;InbreedingCoeff=0.7637;MQ=84.39;MQ0=0;MQRankSum=-11.572;QD=63.17;ReadPosRankSum=9.849;VQSLOD=4.5278;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:1,3:4:9.03:187,9,0	1/1:0,4:4:12.04:272,12,0	0/0:19,0:18:54.18:0,54,1661	0/0:21,0:21:51.10:0,51,1585	1/1:0,7:7:15.05:330,15,0	1/1:0,8:8:24.08:544,24,0	1/1:1,1:2:6.02:116,6,0	0/0:33,0:33:96.33:0,96,3481	1/1:1,7:8:24.07:502,24,0	1/1:0,5:5:15.05:344,15,0	1/1:2,8:10:30.10:637,30,0	1/1:1,5:6:18.05:362,18,0	1/1:1,6:7:21.05:429,21,0	1/1:1,7:8:24.08:528,24,0	1/1:0,13:13:39.13:885,39,0	1/1:0,9:9:27.09:612,27,0	1/1:3,1:4:9.03:161,9,0	1/1:0,1:1:3.01:70,3,0	1/1:3,7:10:30.10:628,30,0	1/1:2,10:12:36.07:719,36,0	1/1:0,2:2:6.02:136,6,0	1/1:1,6:7:21.07:441,21,0	1/1:1,5:6:18.06:378,18,0	1/1:0,2:2:6.01:92,6,0	1/1:0,13:13:39.13:884,39,0	1/1:1,8:9:27.09:607,27,0	1/1:0,9:9:27.09:612,27,0	1/1:0,2:2:6.02:137,6,0
chr10	60855713	.	GGA	G	2614.74	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=11.649;DP=220;FS=1.815;HRun=0;HaplotypeScore=225.3297;InbreedingCoeff=0.6860;MQ=80.42;MQ0=0;MQRankSum=-11.520;QD=17.43;ReadPosRankSum=11.559;VQSLOD=2.6732;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:0,3:3:5.85:35,6,0	1/1:0,4:4:11.87:81,12,0	0/0:20,0:19:54.17:0,54,989	0/0:20,0:20:53.94:0,54,967	1/1:0,7:7:14.53:85,15,0	1/1:0,8:8:23.59:152,24,0	1/1:0,1:1:2.97:20,3,0	0/0:30,0:30:90.30:0,90,1795	1/1:0,7:7:20.56:127,21,0	1/1:0,5:5:14.92:112,15,0	1/1:0,8:8:23.60:151,24,0	1/1:0,5:5:14.80:99,15,0	1/1:0,6:6:17.60:107,18,0	1/1:1,7:8:23.53:148,24,0	1/1:0,13:13:38.15:232,38,0	1/1:0,9:9:26.49:167,26,0	1/1:0,1:1:2.97:20,3,0	1/1:0,1:1:2.97:20,3,0	1/1:0,7:7:20.78:144,21,0	1/1:0,10:10:29.52:190,30,0	1/1:0,2:2:5.89:38,6,0	1/1:0,6:6:17.72:114,18,0	1/1:0,5:5:14.71:90,15,0	1/1:0,2:2:2.96:20,3,0	1/1:0,13:13:38.30:244,38,0	1/1:0,8:8:23.66:159,24,0	1/1:0,9:9:26.50:168,26,0	1/1:0,2:2:5.93:40,6,0
chr10	60855716	.	CATCCATCTCCACACACCCATGTA	C	24765.52	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=11.722;DP=219;FS=1.145;HRun=0;HaplotypeScore=242.9162;InbreedingCoeff=0.7029;MQ=76.55;MQ0=0;MQRankSum=-11.096;QD=165.10;ReadPosRankSum=11.581;VQSLOD=3.2804;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,3:3:6.02:335,6,0	1/1:0,4:4:12.04:683,12,0	0/0:20,0:19:57.20:0,57,4322	0/0:20,0:20:56.36:0,56,4002	1/1:0,7:7:15.04:707,15,0	1/1:0,8:8:24.08:1358,24,0	1/1:0,1:1:3.01:172,3,0	0/0:29,0:29:87.30:0,87,6627	1/1:0,7:7:21.07:1182,21,0	1/1:0,5:5:15.05:858,15,0	1/1:0,8:8:24.08:1363,24,0	1/1:0,5:5:15.05:854,15,0	1/1:0,6:6:18.06:1016,18,0	1/1:1,7:8:24.08:1368,24,0	1/1:0,13:13:39.13:2193,39,0	1/1:0,9:9:27.09:1523,27,0	1/1:0,1:1:3.01:171,3,0	1/1:0,1:1:3.01:168,3,0	1/1:0,7:7:21.07:1181,21,0	1/1:0,10:10:30.10:1701,30,0	1/1:0,2:2:6.02:340,6,0	1/1:0,6:6:18.06:1024,18,0	1/1:0,5:5:15.05:848,15,0	1/1:0,2:2:6.02:302,6,0	1/1:0,13:13:39.13:2202,39,0	1/1:0,8:8:24.08:1350,24,0	1/1:0,9:9:27.09:1524,27,0	1/1:0,2:2:6.02:341,6,0
chr10	60855737	.	GT	G	5739.05	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=12.397;DP=260;FS=1.060;HRun=1;HaplotypeScore=222.3535;InbreedingCoeff=0.7465;MQ=104.23;MQ0=0;MQRankSum=-11.827;QD=32.06;ReadPosRankSum=9.770;VQSLOD=3.1778;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,1:5:9.03:109,9,0	1/1:6,0:6:18.04:199,18,0	0/0:31,0:30:89.33:0,89,1343	0/0:30,0:30:81.24:0,81,1235	1/1:7,0:7:12.03:136,12,0	1/1:8,1:9:24.07:275,24,0	1/1:1,0:1:3.01:34,3,0	0/0:20,0:20:60.20:0,60,935	1/1:8,0:8:24.05:267,24,0	1/1:5,1:6:18.05:206,18,0	1/1:9,1:10:27.07:298,27,0	1/1:5,0:5:15.04:169,15,0	1/1:6,0:6:18.05:205,18,0	1/1:8,0:8:24.04:258,24,0	1/1:13,1:14:42.12:484,42,0	1/1:9,1:10:30.09:348,30,0	1/1:1,1:2:6.02:73,6,0	1/1:2,0:2:3.01:36,3,0	1/1:7,1:8:24.07:286,24,0	1/1:12,3:15:45.12:517,45,0	1/1:2,1:3:9.03:108,9,0	1/1:6,4:10:27.08:320,27,0	1/1:5,1:6:15.04:171,15,0	1/1:2,0:2:6.02:67,6,0	1/1:15,0:15:42.10:471,42,0	1/1:9,1:10:27.08:322,27,0	1/1:9,0:9:27.08:311,27,0	1/1:2,0:2:6.02:70,6,0
chr10	60855830	.	AG	A	14481.88	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=12.326;DP=596;FS=2.305;HRun=2;HaplotypeScore=86.2070;InbreedingCoeff=0.9947;MQ=93.65;MQ0=0;MQRankSum=-6.642;QD=36.20;ReadPosRankSum=4.438;VQSLOD=5.3452;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,20:20:57.19:738,57,0	1/1:0,14:14:39.13:506,39,0	0/0:33,0:33:93.31:0,93,1366	0/0:26,0:26:72.24:0,72,1052	1/1:0,21:21:54.18:701,54,0	0/0:31,0:31:84.24:0,84,1234	0/0:12,0:12:33.11:0,33,495	0/0:32,0:32:96.32:0,96,1421	1/1:0,14:14:42.14:545,42,0	1/1:0,21:21:60.18:763,60,0	1/1:0,31:31:93.30:1208,93,0	1/1:1,15:16:45.15:584,45,0	1/1:0,13:13:39.13:506,39,0	1/1:1,24:25:66.21:856,66,0	1/1:2,14:16:36.12:467,36,0	1/1:0,19:19:57.19:740,57,0	1/1:0,15:15:45.15:584,45,0	1/1:0,12:12:36.12:467,36,0	1/1:3,27:30:84.10:1064,84,0	1/1:2,33:35:84.27:1090,84,0	1/1:1,31:32:93.30:1207,93,0	0/0:18,0:18:51.16:0,51,743	0/0:28,0:28:78.16:0,78,1168	0/0:16,0:16:48.16:0,48,719	1/1:1,18:19:51.17:662,51,0	1/1:0,18:18:54.18:701,54,0	1/1:1,24:25:72.23:935,72,0	1/1:0,4:4:12.04:156,12,0
chr10	60856771	.	T	TGTGTGCGC	8830.37	PASS	AB=1.000;AC=36;AF=0.667;AN=54;BaseQRankSum=1.546;DP=610;FS=2.501;HRun=0;HaplotypeScore=157.4545;InbreedingCoeff=0.8217;MQ=56.10;MQ0=15;MQRankSum=0.677;QD=21.49;ReadPosRankSum=1.536;VQSLOD=4.5480;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:26:51.06:706,51,0	1/1:9,0:9:15.03:332,15,0	0/0:25,0:15:39.02:0,39,582	0/0:22,0:11:27.04:0,27,461	1/1:21,0:21:29.67:439,30,0	0/0:20,0:20:47.35:0,47,683	0/0:13,0:13:36.07:0,36,530	0/0:28,0:28:64.08:0,64,1038	0/1:19,0:19:12.04:96,0,12	1/1:31,0:30:71.16:1046,71,0	1/1:21,0:21:39.03:517,39,0	1/1:16,0:16:30.07:385,30,0	1/1:7,22:30:8.32:253,8,0	1/1:4,10:13:9.03:321,9,0	1/1:22,0:22:39.10:578,39,0	1/1:7,0:7:15.01:350,15,0	1/1:7,17:26:6.02:130,6,0	0/1:17,0:16:0.65:1,0,63	1/1:18,0:18:41.44:522,41,0	1/1:32,0:32:51.15:784,51,0	1/1:48,0:47:78.29:1133,78,0	0/0:20,0:19:47.26:0,47,749	0/0:15,0:14:27.06:0,27,381	0/0:38,0:37:59.05:0,59,1075	./.	1/1:26,0:25:54.08:710,54,0	1/1:6,14:22:9.29:358,9,0	1/1:4,0:3:9.03:169,9,0
chr10	60856775	.	T	TGC	3938.58	PASS	AB=0.870;AC=33;AF=0.589;AN=56;BaseQRankSum=6.922;DP=628;FS=2.932;HRun=0;HaplotypeScore=121.2542;InbreedingCoeff=0.6203;MQ=54.11;MQ0=16;MQRankSum=1.457;QD=9.54;ReadPosRankSum=3.375;VQSLOD=3.1963;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:28,1:28:48.86:403,49,0	1/1:9,0:9:14.93:159,15,0	0/0:24,0:14:38.69:0,39,321	0/0:20,0:9:26.92:0,27,251	1/1:18,2:20:31.58:237,32,0	0/0:21,0:21:47.86:0,48,393	0/0:15,0:15:35.76:0,36,295	0/0:28,0:28:69.32:0,69,600	1/1:19,0:19:9.91:102,10,0	1/1:31,0:30:46.97:447,47,0	1/1:24,0:24:40.70:300,41,0	1/1:16,0:16:29.60:210,30,0	0/1:30,0:29:27.02:27,0,42	1/1:13,1:13:9.90:91,10,0	1/1:22,0:22:16.75:271,17,0	1/1:6,1:7:11.96:118,12,0	0/0:26,0:26:5.32:0,5,33	0/1:3,13:15:20.77:145,0,21	1/1:20,0:20:19.83:238,20,0	1/1:33,0:33:40.12:343,40,0	1/1:52,0:51:23.11:515,23,0	0/0:24,0:23:47.94:0,48,413	0/0:16,0:15:26.81:0,27,212	0/0:40,0:40:74.34:0,74,596	0/1:20,0:19:0.96:1,0,16	0/1:27,0:26:70.18:261,0,70	1/1:20,0:20:2.86:20,3,0	0/1:3,1:3:5.10:50,0,5
chr10	60856777	.	C	CGCGTGT	5335.93	PASS	AB=0.937;AC=31;AF=0.554;AN=56;BaseQRankSum=6.599;DP=652;FS=8.102;HRun=0;HaplotypeScore=166.7965;InbreedingCoeff=0.4835;MQ=53.25;MQ0=19;MQRankSum=-0.332;QD=12.29;ReadPosRankSum=2.119;VQSLOD=3.4290;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:32,0:33:49.09:475,49,0	1/1:9,0:9:14.83:230,15,0	0/0:24,0:14:38.69:0,39,321	0/0:20,0:9:26.92:0,27,251	1/1:19,0:19:29.74:232,30,0	0/0:23,0:23:37.76:0,38,396	0/0:14,0:15:35.58:0,36,323	0/0:30,0:29:57.22:0,57,574	0/1:2,1:19:32:194,0,32	1/1:33,0:32:43.33:472,43,0	1/1:25,0:25:41.28:312,41,0	1/1:16,0:16:29.73:273,30,0	0/1:29,0:28:9.84:184,0,10	0/1:15,0:14:15.63:241,0,16	1/1:22,0:24:16.78:271,17,0	0/1:8,0:8:6.98:259,0,7	0/1:25,0:25:39.61:50,0,40	0/1:17,0:15:9.17:9,0,51	1/1:5,13:22:19.73:306,20,0	1/1:34,0:34:56.14:436,56,0	1/1:53,0:52:82.89:699,83,0	0/0:24,0:23:47.47:0,47,442	0/0:16,0:18:26.81:0,27,212	0/0:34,0:42:74.05:0,74,675	0/0:5,14:19:2.87:0,3,15	1/1:28,0:27:10.18:376,10,0	0/1:20,0:19:10.62:208,0,11	1/1:4,0:3:8.99:107,9,0
chr10	60858044	.	CTGTT	C	6918.67	PASS	AB=0.963;AC=46;AF=0.821;AN=56;BaseQRankSum=2.200;DP=529;FS=16.913;HRun=0;HaplotypeScore=211.4762;InbreedingCoeff=0.5203;MQ=67.18;MQ0=1;MQRankSum=-2.963;QD=15.34;ReadPosRankSum=7.493;VQSLOD=2.9241;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:13:27.50:243,28,0	1/1:10,0:10:22.09:175,22,0	0/0:24,0:21:36.85:0,37,426	0/0:14,0:13:16.75:0,17,168	1/1:31,0:31:56.19:529,56,0	0/1:20,0:20:4.88:124,0,5	0/1:9,1:10:7.48:116,0,7	0/0:39,0:39:99:0,99,1723	1/1:16,1:17:0.94:180,1,0	1/1:26,0:25:63.39:549,63,0	1/1:26,0:26:41.96:374,42,0	1/1:17,0:17:33.51:351,34,0	1/1:14,1:15:24.09:243,24,0	1/1:13,0:13:22.94:166,23,0	1/1:18,0:18:27.36:223,27,0	1/1:16,0:16:25.30:208,25,0	1/1:13,1:14:35.50:284,35,0	0/1:10,0:10:19.90:81,0,20	1/1:8,0:4:11.40:85,11,0	1/1:34,0:34:68.95:500,69,0	1/1:12,0:12:22.26:198,22,0	0/1:15,1:16:2.56:208,0,3	1/1:19,1:20:18.07:253,18,0	1/1:11,1:12:18.59:221,19,0	1/1:25,0:25:32.35:246,32,0	1/1:30,1:31:83.49:703,83,0	1/1:31,0:31:48.22:576,48,0	1/1:4,0:4:11.48:82,11,0
chr10	60858046	.	GTTTGTT	G	5066.57	PASS	AB=0.971;AC=33;AF=0.589;AN=56;BaseQRankSum=-8.414;DP=522;FS=6.536;HRun=0;HaplotypeScore=233.6041;InbreedingCoeff=-0.0992;MQ=67.18;MQ0=3;MQRankSum=3.028;QD=11.70;ReadPosRankSum=6.148;VQSLOD=2.1691;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:15,0:14:9.38:260,0,9	0/1:10,0:10:8.11:166,0,8	0/0:26,0:21:32.30:0,32,567	0/0:14,0:12:21.13:0,21,232	0/1:30,0:30:11.28:442,0,11	0/1:20,0:20:52.89:53,0,202	0/0:11,0:11:2.10:0,2,124	0/0:38,0:38:99:0,99,2252	0/1:16,1:17:19.62:99,0,20	1/1:22,2:24:47.26:466,47,0	0/1:25,0:25:14.78:296,0,15	1/1:15,1:16:18.48:344,18,0	1/1:15,0:15:6.81:94,7,0	0/1:12,1:13:6.31:126,0,6	0/1:16,1:17:12.11:173,0,12	0/1:15,1:16:1.75:100,0,2	1/1:11,2:14:20.75:243,21,0	0/1:9,1:10:1.02:92,0,1	1/1:5,3:4:8.86:79,9,0	1/1:33,1:34:1.46:515,1,0	1/1:11,1:12:15.95:154,16,0	0/1:15,0:16:68.11:68,0,146	0/1:17,0:17:25.65:26,0,101	0/1:12,0:12:26.22:51,0,26	0/1:24,1:25:17.76:88,0,18	1/1:29,2:31:62.74:639,63,0	0/1:28,2:30:8.61:418,0,9	1/1:4,0:4:9.87:76,10,0
chr10	60858047	.	TTTG	T	12622.90	PASS	AB=0.625;AC=49;AF=0.875;AN=56;BaseQRankSum=3.524;DP=518;FS=16.595;HRun=0;HaplotypeScore=181.5553;InbreedingCoeff=0.8659;MQ=67.04;MQ0=4;MQRankSum=-5.257;QD=28.75;ReadPosRankSum=6.619;VQSLOD=3.6051;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,5:14:34.12:388,34,0	1/1:9,1:10:29.98:318,30,0	0/0:27,0:21:14.85:0,15,296	0/0:16,0:13:19.08:0,19,154	1/1:21,9:30:67.51:835,68,0	1/1:18,2:20:42.47:449,42,0	1/1:5,6:11:10.81:249,11,0	0/0:36,0:36:99:0,99,1386	1/1:6,11:17:30.63:361,31,0	1/1:16,8:23:66.14:814,66,0	1/1:18,5:23:65.64:692,66,0	1/1:10,6:16:44.48:583,44,0	1/1:4,10:14:29.97:411,30,0	1/1:11,2:13:38.99:420,39,0	1/1:13,4:17:47.92:502,48,0	1/1:8,8:16:39.01:474,39,0	1/1:10,4:14:37.97:409,38,0	0/1:4,6:10:0.62:133,0,1	1/1:7,1:4:12.03:140,12,0	1/1:27,7:34:93.11:1057,93,0	1/1:3,8:11:24.07:350,24,0	1/1:12,4:16:41.86:482,42,0	1/1:13,4:17:40.08:489,40,0	1/1:8,4:12:20.84:323,21,0	1/1:8,17:25:42.03:521,42,0	1/1:12,20:31:93.09:1057,93,0	1/1:18,11:29:83.36:1065,83,0	1/1:4,0:4:11.99:102,12,0
chr10	60858048	.	TTG	T	7468.48	PASS	AB=1.000;AC=49;AF=0.875;AN=56;BaseQRankSum=4.132;DP=518;FS=20.839;HRun=0;HaplotypeScore=192.7180;InbreedingCoeff=0.6936;MQ=65.98;MQ0=4;MQRankSum=-4.902;QD=17.05;ReadPosRankSum=5.675;VQSLOD=2.9362;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:14:29.39:242,29,0	1/1:10,0:10:24.77:203,25,0	0/0:28,0:21:23.82:0,24,304	0/0:15,0:12:3.94:0,4,105	1/1:30,1:31:69.91:557,70,0	1/1:18,1:19:20.29:346,20,0	0/1:11,0:11:19.42:121,0,19	0/0:37,0:37:98.93:0,99,1174	1/1:17,0:17:12.47:162,12,0	1/1:23,1:23:63.76:562,64,0	1/1:22,1:23:50.59:379,51,0	1/1:16,0:16:40.41:348,40,0	1/1:13,0:13:28.44:241,28,0	1/1:13,0:13:27.86:177,28,0	1/1:17,0:17:33.98:238,34,0	1/1:16,0:16:28.82:210,29,0	1/1:14,0:14:37.09:281,37,0	1/1:9,0:9:0.13:73,0,0	1/1:9,0:5:14.33:101,14,0	1/1:33,0:33:75.16:494,75,0	1/1:12,0:12:25.64:206,26,0	1/1:16,0:16:40.28:348,40,0	1/1:17,0:17:34.92:345,35,0	1/1:12,0:12:19.35:211,19,0	1/1:24,1:25:36.62:313,37,0	1/1:32,0:31:84.97:650,85,0	1/1:29,0:29:66.99:578,67,0	1/1:4,0:4:11.36:82,11,0
chr10	60858049	.	TG	T	6455.32	PASS	AB=1.000;AC=49;AF=0.875;AN=56;BaseQRankSum=4.839;DP=517;FS=23.410;HRun=1;HaplotypeScore=193.8265;InbreedingCoeff=0.7185;MQ=65.76;MQ0=4;MQRankSum=-4.400;QD=14.77;ReadPosRankSum=6.113;VQSLOD=2.7498;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:16:34.93:213,35,0	1/1:11,0:11:24.96:165,25,0	0/0:28,0:21:29.73:0,30,291	0/0:14,1:12:3.71:0,4,97	1/1:32,0:32:66.70:505,67,0	1/1:18,0:18:16.45:250,16,0	0/1:11,0:11:12.02:118,0,12	0/0:37,0:37:32.58:0,33,850	1/1:17,0:17:25.51:164,26,0	1/1:23,0:22:63.40:467,63,0	1/1:22,1:23:53.09:347,53,0	1/1:16,0:16:41.01:290,41,0	1/1:13,0:13:28.16:199,28,0	1/1:13,0:13:28.48:152,28,0	1/1:17,0:17:37.22:223,37,0	1/1:16,0:16:30.54:178,31,0	1/1:13,1:14:36.61:237,37,0	1/1:9,0:9:2.40:66,2,0	1/1:9,0:5:14.02:89,14,0	1/1:32,0:32:74.94:416,75,0	1/1:12,0:12:25.43:174,25,0	1/1:16,1:17:41.82:312,42,0	1/1:13,1:14:36.87:323,37,0	1/1:11,1:12:20.47:186,20,0	1/1:25,0:25:35.60:227,36,0	1/1:32,0:31:83.95:579,84,0	1/1:29,0:29:76.16:496,76,0	1/1:4,0:4:11.36:82,11,0
chr10	60858060	.	T	TTTG	3478.67	PASS	AB=0.981;AC=44;AF=0.786;AN=56;BaseQRankSum=2.751;DP=529;FS=6.105;HRun=0;HaplotypeScore=233.0382;InbreedingCoeff=0.1900;MQ=54.70;MQ0=8;MQRankSum=0.713;QD=7.11;ReadPosRankSum=-6.503;VQSLOD=0.0713;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:16:2.40:114,2,0	1/1:9,0:10:20.33:107,20,0	0/1:30,0:16:18.43:18,0,67	0/0:21,0:8:6.93:0,7,40	1/1:29,0:31:25.01:216,25,0	0/1:14,0:16:62.65:63,0,63	0/1:12,0:12:37.23:37,0,43	1/1:17,15:34:48.07:627,48,0	1/1:15,0:15:16.56:115,17,0	1/1:22,0:21:22.24:152,22,0	1/1:23,0:23:33.82:195,34,0	1/1:18,0:18:8.84:95,9,0	0/1:17,0:17:5.50:127,0,5	1/1:13,0:13:12.24:100,12,0	1/1:18,0:19:27.14:151,27,0	1/1:16,0:16:18.47:111,18,0	1/1:13,0:13:6.40:44,6,0	0/0:8,0:8:0.23:0,0,4	1/1:10,0:6:16.71:114,17,0	1/1:32,0:32:47.95:253,48,0	1/1:12,0:13:11.49:92,11,0	0/1:20,0:20:56.71:57,0,117	0/1:19,0:19:44.82:45,0,107	0/0:11,0:11:8.04:0,8,93	1/1:27,0:27:29.60:170,30,0	1/1:27,0:26:40.27:201,40,0	1/1:28,0:29:40.81:244,41,0	1/1:4,0:4:5.74:31,6,0
chr10	60858072	.	G	GT	4342.88	PASS	AB=0.799;AC=28;AF=0.500;AN=56;BaseQRankSum=6.923;DP=523;FS=2.387;HRun=2;HaplotypeScore=209.8915;InbreedingCoeff=-0.4576;MQ=46.47;MQ0=8;MQRankSum=-4.333;QD=10.05;ReadPosRankSum=6.697;VQSLOD=2.9796;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:14,3:15:65.79:69,0,66	1/1:5,5:10:15.37:178,15,0	0/0:30,0:11:11.84:0,12,160	0/0:26,0:9:10.57:0,11,100	0/1:25,8:33:12.99:253,0,13	0/1:6,6:12:33.19:146,0,33	0/1:8,4:13:52.77:105,0,53	0/0:27,0:27:30.65:0,31,378	0/1:9,4:13:79.14:143,0,79	0/1:20,4:23:99:183,0,118	0/1:10,11:21:17.19:345,0,17	0/1:12,3:15:56.71:95,0,57	0/1:14,4:20:38.83:187,0,39	1/1:6,8:14:7.74:243,8,0	0/1:12,7:19:20.89:243,0,21	0/1:11,7:18:38.75:258,0,39	1/1:9,2:11:1.39:76,1,0	0/0:7,0:7:11.19:0,11,60	0/1:10,2:9:71.12:106,0,71	1/1:14,16:30:23.81:515,24,0	0/1:11,1:12:46.60:47,0,82	0/1:24,2:26:77.19:81,0,77	0/1:15,3:18:23:108,0,23	0/1:8,1:9:3.35:3,0,34	0/1:17,7:25:49.75:286,0,50	0/1:16,8:23:17.54:364,0,18	0/1:21,8:29:99:276,0,101	0/1:5,1:6:34.79:35,0,52
chr10	60858074	.	T	TTGTTTTG	26309.16	PASS	AB=1.000;AC=45;AF=0.804;AN=56;BaseQRankSum=-1.524;DP=528;FS=4.486;HRun=0;HaplotypeScore=185.4288;InbreedingCoeff=0.1310;MQ=49.05;MQ0=9;MQRankSum=-5.347;QD=55.98;ReadPosRankSum=7.996;VQSLOD=3.9592;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:15:18.21:894,18,0	1/1:9,0:9:24.08:870,24,0	0/1:32,0:12:11.59:12,0,160	0/0:31,0:10:10.55:0,11,198	1/1:27,6:35:49.43:1917,49,0	0/1:11,0:11:9.34:822,0,9	1/1:12,0:12:25.48:823,25,0	0/0:26,0:26:62.58:0,63,902	0/1:13,0:13:13.77:816,0,14	0/1:23,0:22:51.59:1197,0,52	1/1:21,0:21:18.76:1664,19,0	0/1:15,0:15:16:766,0,16	1/1:20,0:20:40.47:1455,40,0	1/1:15,0:15:27.98:1048,28,0	1/1:15,4:20:35.07:1396,35,0	1/1:18,0:18:25.45:1287,25,0	1/1:11,0:11:22.88:636,23,0	1/1:7,0:7:9.35:267,9,0	0/1:12,0:9:45.58:657,0,46	1/1:30,0:30:63.78:2436,64,0	0/1:12,0:12:68.19:232,0,68	1/1:26,0:26:5.48:751,5,0	1/1:17,0:17:0.33:640,0,0	1/1:9,0:9:1.62:280,2,0	1/1:24,0:24:27.65:1773,28,0	1/1:26,0:24:29.83:1608,30,0	1/1:29,0:29:6.87:1814,7,0	1/1:6,0:6:11.19:249,11,0
chr10	60858075	.	G	GGTTTTGT	26454.64	PASS	AB=0.702;AC=38;AF=0.679;AN=56;BaseQRankSum=-4.242;DP=551;FS=0.000;HRun=0;HaplotypeScore=189.0245;InbreedingCoeff=-0.1046;MQ=49.82;MQ0=9;MQRankSum=-7.006;QD=53.44;ReadPosRankSum=9.540;VQSLOD=4.1221;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:10,0:14:24.07:678,0,24	1/1:2,0:12:24.08:875,24,0	0/1:31,0:12:2.73:3,0,187	0/0:32,0:10:11.97:0,12,195	1/1:21,0:36:12.51:1848,13,0	0/1:4,0:13:1.57:827,0,2	1/1:8,0:12:30.06:924,30,0	0/0:24,0:24:58.51:0,59,775	0/1:7,0:13:30.06:805,0,30	0/1:11,0:24:99:1286,0,104	1/1:6,1:27:28.16:1805,28,0	0/1:8,0:17:23.24:765,0,23	1/1:8,0:19:36.50:1440,36,0	0/1:7,0:15:7.90:1066,0,8	1/1:9,0:20:13.12:1352,13,0	1/1:9,0:18:20.25:1310,20,0	1/1:8,0:11:23.02:676,23,0	0/1:4,0:7:7.44:220,0,7	0/1:5,0:9:44.32:656,0,44	1/1:7,1:33:74.61:2575,75,0	0/1:10,0:12:96.87:227,0,97	1/1:8,0:29:10.15:789,10,0	0/1:6,0:20:43.17:633,0,43	0/1:6,0:10:24.19:187,0,24	1/1:10,0:24:4.42:1801,4,0	0/1:15,0:24:63.58:1602,0,64	0/1:18,0:30:45.18:1807,0,45	1/1:4,0:6:11.50:298,12,0
chr10	60858085	.	T	TTTTGTTTTGT	32300.37	PASS	AB=1.000;AC=51;AF=0.911;AN=56;BaseQRankSum=-0.062;DP=549;FS=0.000;HRun=0;HaplotypeScore=191.4031;InbreedingCoeff=0.7519;MQ=50.29;MQ0=7;MQRankSum=-5.518;QD=66.19;ReadPosRankSum=4.437;VQSLOD=4.3169;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:11:21.07:681,21,0	1/1:12,0:12:24.08:1045,24,0	0/1:28,0:10:9.90:10,0,127	0/0:34,0:12:11.97:0,12,211	1/1:36,0:36:69.12:2442,69,0	1/1:14,0:14:27.06:1032,27,0	1/1:14,0:14:36.12:1107,36,0	0/0:27,0:27:37.23:0,37,698	1/1:11,0:11:27.09:1028,27,0	1/1:25,0:25:54.13:1784,54,0	1/1:28,0:28:57.04:2100,57,0	1/1:16,0:16:24.08:910,24,0	1/1:18,0:18:54.18:1879,54,0	1/1:12,0:12:36.11:1250,36,0	1/1:23,0:23:42.14:1623,42,0	1/1:16,0:16:45.12:1592,45,0	1/1:10,0:10:27.09:787,27,0	1/1:6,0:6:15.05:302,15,0	1/1:11,0:9:24.04:915,24,0	1/1:39,0:39:75.24:2747,75,0	1/1:11,0:11:15.05:466,15,0	1/1:33,0:33:33.06:925,33,0	1/1:18,0:18:21.07:845,21,0	1/1:12,0:12:12.04:341,12,0	1/1:26,0:26:60.20:2212,60,0	1/1:22,0:21:48.16:1830,48,0	1/1:22,6:29:60.20:2120,60,0	1/1:5,0:5:12.04:329,12,0
chr10	60858873	.	CTT	C	11153.26	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-0.874;DP=586;FS=3.152;HRun=10;HaplotypeScore=121.9668;InbreedingCoeff=0.9826;MQ=68.29;MQ0=1;MQRankSum=0.406;QD=26.88;ReadPosRankSum=4.126;VQSLOD=4.4662;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,19:24:59.80:635,60,0	1/1:6,4:10:12.02:134,12,0	0/0:13,0:12:27.09:0,27,414	0/0:14,0:12:15.05:0,15,222	1/1:4,32:36:87.20:970,87,0	0/0:0,0:35:87.34:0,87,300	0/0:1,0:14:28.42:0,28,121	0/0:37,0:37:96.32:0,96,1499	1/1:1,18:19:54.15:602,54,0	1/1:4,20:24:60.14:669,60,0	1/1:3,21:25:62.89:681,63,0	1/1:3,12:15:36.09:401,36,0	1/1:3,21:24:57.14:635,57,0	1/1:2,16:18:48.11:535,48,0	1/1:0,16:16:48.13:535,48,0	1/1:2,9:11:27.07:301,27,0	1/1:1,13:14:33.08:368,33,0	1/1:4,20:24:46.20:561,46,0	1/1:3,19:22:57.15:635,57,0	1/1:4,31:35:84.18:936,84,0	1/1:3,14:17:36.08:401,36,0	0/0:2,0:20:44.92:0,45,154	0/0:5,1:23:10.24:0,10,105	0/0:1,0:15:35.28:0,35,131	1/1:3,17:20:45.11:502,45,0	1/1:3,17:20:51.12:569,51,0	1/1:4,28:33:80.94:882,81,0	1/1:2,6:8:18.04:201,18,0
chr10	60859780	.	TAA	T	14366.09	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=6.132;DP=619;FS=1.106;HRun=7;HaplotypeScore=151.9812;InbreedingCoeff=0.9925;MQ=73.35;MQ0=1;MQRankSum=-7.189;QD=32.87;ReadPosRankSum=4.433;VQSLOD=3.2881;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,19:20:51.16:650,51,0	1/1:1,7:8:18.05:230,18,0	0/0:27,0:27:37.50:0,38,893	0/0:23,0:23:35.20:0,35,815	1/1:2,30:32:84.27:1065,84,0	0/0:2,0:40:92.33:0,92,328	0/0:1,0:16:37.93:0,38,148	0/0:2,0:29:68.18:0,68,253	1/1:1,23:24:60.19:764,60,0	1/1:1,25:25:72.23:918,72,0	1/1:2,27:29:75.24:956,75,0	1/1:2,24:26:72.23:915,72,0	1/1:2,17:19:48.15:612,48,0	1/1:0,28:28:72.23:917,72,0	1/1:4,23:27:66.21:841,66,0	1/1:1,21:22:60.19:765,60,0	1/1:2,21:23:54.17:688,54,0	1/1:1,15:17:45.14:572,45,0	1/1:1,18:18:51.16:650,51,0	1/1:4,22:26:57.17:726,57,0	1/1:1,11:12:30.10:382,30,0	0/0:1,0:16:34.93:0,35,124	0/0:3,0:22:47.92:0,48,186	0/0:1,0:9:19.96:0,20,71	1/1:0,16:16:42.13:535,42,0	1/1:1,27:27:78.25:994,78,0	1/1:2,28:30:81.26:1032,81,0	1/1:1,4:5:12.04:153,12,0
chr10	60859964	.	C	CT	18432.84	PASS	AB=0.593;AC=49;AF=0.875;AN=56;BaseQRankSum=-1.550;DP=677;FS=8.925;HRun=6;HaplotypeScore=88.2116;InbreedingCoeff=0.9071;MQ=60.43;MQ0=3;MQRankSum=4.100;QD=31.30;ReadPosRankSum=7.250;VQSLOD=3.7644;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,18:23:45.10:548,45,0	1/1:1,8:9:24.08:300,24,0	0/0:30,0:16:37.62:0,38,363	0/0:22,0:18:33.06:0,33,335	1/1:3,32:35:93.26:1152,93,0	1/1:4,32:35:84.27:1057,84,0	1/1:3,16:19:45.14:566,45,0	0/0:36,0:36:99:0,99,993	1/1:2,24:26:66.21:830,66,0	1/1:4,20:24:60.19:755,60,0	1/1:3,22:25:63.17:775,63,0	1/1:2,18:20:54.17:679,54,0	1/1:0,16:16:48.15:604,48,0	1/1:1,34:35:96.30:1198,96,0	1/1:1,17:18:48.15:604,48,0	1/1:2,18:20:51.16:642,51,0	1/1:4,20:24:29.67:686,30,0	1/1:2,32:34:84.27:1057,84,0	0/1:5,11:14:0.52:308,0,1	1/1:3,33:36:96.31:1208,96,0	1/1:4,22:26:60.19:755,60,0	1/1:0,15:15:39.12:491,39,0	1/1:2,22:24:63.20:793,63,0	1/1:2,19:21:57.18:717,57,0	1/1:2,27:29:75.24:944,75,0	1/1:2,11:13:33.06:385,33,0	1/1:2,28:29:72.23:906,72,0	1/1:2,13:15:39.09:474,39,0
chr10	60863824	.	G	GA	11943.55	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=1.259;DP=434;FS=3.684;HRun=7;HaplotypeScore=55.5691;InbreedingCoeff=0.9085;MQ=64.29;MQ0=1;MQRankSum=-0.760;QD=29.86;ReadPosRankSum=5.113;VQSLOD=5.1159;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,14:18:30.09:362,30,0	1/1:0,7:7:18.06:217,18,0	0/0:5,0:5:11.63:0,12,116	0/0:6,0:6:8.38:0,8,67	1/1:1,23:24:66.12:762,66,0	1/1:0,8:8:21.06:253,21,0	1/1:2,6:8:15.05:181,15,0	0/0:23,0:22:60.09:0,60,579	1/1:1,20:21:54.17:652,54,0	1/1:1,18:19:54.17:651,54,0	1/1:2,30:31:84.26:1012,84,0	1/1:0,11:11:27.08:326,27,0	1/1:1,14:15:39.12:471,39,0	1/1:0,10:10:30.09:362,30,0	1/1:2,12:14:33.10:399,33,0	1/1:1,11:12:30.09:362,30,0	1/1:1,17:19:48.01:558,48,0	1/1:1,17:18:45.14:543,45,0	1/1:4,10:14:27.08:320,27,0	1/1:5,24:29:66.16:774,66,0	1/1:1,3:4:6.02:73,6,0	1/1:2,6:8:18.06:217,18,0	1/1:2,11:13:33.10:399,33,0	1/1:2,6:8:15.05:181,15,0	1/1:1,24:25:69.21:834,69,0	1/1:1,22:23:63.19:761,63,0	1/1:0,23:23:60.18:725,60,0	1/1:1,15:17:48:548,48,0
chr10	60864241	.	CA	C	1244.46	PASS	AB=0.830;AC=14;AF=0.250;AN=56;BaseQRankSum=6.948;DP=472;FS=0.000;HRun=12;HaplotypeScore=55.1192;InbreedingCoeff=0.6787;MQ=78.92;MQ0=0;MQRankSum=0.638;QD=12.20;ReadPosRankSum=0.196;VQSLOD=3.1564;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,1:18:9.80:0,10,268	0/0:6,0:6:10.26:0,10,94	0/0:24,0:19:4.42:0,4,145	0/0:11,0:10:4.50:0,5,78	0/0:22,2:24:27.90:0,28,570	1/1:1,20:23:57.87:430,58,0	1/1:3,8:11:20.89:162,21,0	1/1:3,14:18:10.35:244,10,0	0/0:8,0:8:18.03:0,18,177	0/0:17,0:17:15.79:0,16,318	0/0:27,1:30:18.49:0,18,482	0/0:11,0:12:29.89:0,30,286	0/0:15,2:17:12.81:0,13,294	0/1:9,1:10:1.66:2,0,134	0/0:23,0:23:54.10:0,54,543	0/0:13,0:14:12.82:0,13,280	0/0:20,2:24:17.28:0,17,519	0/0:13,0:13:23.95:0,24,209	0/0:23,0:25:29.37:0,29,420	0/0:20,2:24:10.41:0,10,432	0/1:4,2:6:31.44:31,0,76	1/1:1,13:14:8.40:248,8,0	1/1:2,14:16:32.86:255,33,0	1/1:1,3:4:5.98:46,6,0	0/0:19,1:22:16.51:0,17,431	0/0:21,0:21:33.91:0,34,514	0/0:27,0:27:60.04:0,60,570	0/0:7,1:9:0.65:0,1,174
chr10	60864822	.	CA	C	13215.74	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=11.027;DP=654;FS=1.476;HRun=6;HaplotypeScore=68.1144;InbreedingCoeff=0.9990;MQ=90.60;MQ0=0;MQRankSum=-7.000;QD=29.11;ReadPosRankSum=6.766;VQSLOD=4.7332;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,26:29:72.18:774,72,0	1/1:0,10:10:20.95:226,21,0	0/0:31,0:31:81.26:0,81,1047	0/0:21,0:21:60.18:0,60,749	1/1:2,35:37:96.23:1032,96,0	0/0:32,0:32:96.30:0,96,1248	0/0:15,0:15:42.12:0,42,536	0/0:31,0:31:73.48:0,73,950	1/1:2,29:31:75.19:806,75,0	1/1:0,21:21:63.16:677,63,0	1/1:1,21:22:54.13:575,54,0	1/1:1,23:24:72.17:766,72,0	1/1:2,15:17:45.11:484,45,0	1/1:0,18:18:54.14:580,54,0	1/1:1,22:23:63.16:677,63,0	1/1:0,26:26:78.20:838,78,0	1/1:2,12:14:30.08:322,30,0	1/1:0,12:12:36.09:387,36,0	1/1:1,26:27:78.17:822,78,0	1/1:2,24:26:66.16:709,66,0	1/1:1,14:15:39.10:419,39,0	0/0:26,0:26:72.23:0,72,947	0/0:26,0:26:63.20:0,63,816	0/0:18,0:18:54.18:0,54,708	1/1:1,24:25:69.17:741,69,0	1/1:2,39:41:99:1251,117,0	1/1:0,27:27:78.19:838,78,0	1/1:0,9:9:27.07:290,27,0
chr10	60865186	.	A	AGTGTGTGTGTGTGT	12093.33	PASS	AB=1.000;AC=49;AF=0.907;AN=54;BaseQRankSum=-3.197;DP=730;FS=21.780;HRun=0;HaplotypeScore=330.6746;InbreedingCoeff=0.3765;MQ=62.13;MQ0=6;MQRankSum=-0.514;QD=19.20;ReadPosRankSum=2.927;VQSLOD=1.9269;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:48,0:47:1.96:206,2,0	1/1:12,0:12:8.92:254,9,0	0/0:40,0:30:6.02:0,6,129	0/0:35,0:22:3.19:0,3,191	0/1:22,0:22:0:0,0,0	1/1:33,0:40:21.07:880,21,0	1/1:25,0:28:12.04:443,12,0	1/1:40,0:38:30.04:816,30,0	1/1:16,0:16:9.03:371,9,0	1/1:25,0:24:32.24:1006,32,0	1/1:19,1:19:2.26:200,2,0	1/1:19,2:22:15.05:850,15,0	1/1:14,2:18:12.04:645,12,0	1/1:23,0:27:8.52:420,9,0	1/1:26,4:32:5.47:236,5,0	1/1:16,0:16:9.03:404,9,0	1/1:19,0:19:9.03:333,9,0	1/1:20,0:19:20.41:580,20,0	1/1:28,0:28:26.26:638,26,0	1/1:24,0:26:1.68:25,2,0	./.	1/1:23,0:28:10.78:429,11,0	1/1:22,4:26:0.76:95,1,0	1/1:20,0:20:4.35:226,4,0	1/1:28,3:33:9.03:542,9,0	1/1:32,0:32:39.13:1657,39,0	1/1:16,1:17:9.03:526,9,0	1/1:10,0:12:9.03:311,9,0
chr10	60865770	.	A	AT	14337.52	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-14.538;DP=637;FS=3.409;HRun=7;HaplotypeScore=57.6104;InbreedingCoeff=0.9980;MQ=74.39;MQ0=0;MQRankSum=-1.657;QD=31.79;ReadPosRankSum=6.242;VQSLOD=4.2156;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,15:17:42.13:507,42,0	1/1:2,8:10:21.06:254,21,0	0/0:20,0:21:25.57:0,26,384	0/0:8,0:8:24.01:0,24,221	1/1:4,31:35:87.27:1051,87,0	0/0:33,0:33:93.15:0,93,898	0/0:15,0:15:45.07:0,45,434	0/0:38,0:38:99:0,105,1001	1/1:5,19:24:57.17:689,57,0	1/1:2,40:42:99:1499,126,0	1/1:3,19:22:57.17:689,57,0	1/1:1,17:18:48.15:580,48,0	1/1:0,20:20:56.91:688,57,0	1/1:4,30:34:87.27:1051,87,0	1/1:2,16:18:48.15:580,48,0	1/1:1,20:21:60.18:725,60,0	1/1:1,17:18:48.15:580,48,0	1/1:3,24:27:71.96:846,72,0	1/1:0,15:15:45.14:543,45,0	1/1:3,30:33:87.22:1034,87,0	1/1:0,8:8:24.07:290,24,0	0/0:25,0:25:66.10:0,66,637	0/0:30,0:30:72.09:0,72,689	0/0:16,0:16:42.06:0,42,406	1/1:0,18:18:51.16:616,51,0	1/1:1,26:27:75.22:895,75,0	1/1:7,27:34:78.22:930,78,0	1/1:1,9:10:24.07:290,24,0
chr10	60866165	.	G	GA	4061.73	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-12.674;DP=692;FS=0.820;HRun=6;HaplotypeScore=66.1239;InbreedingCoeff=0.9596;MQ=69.45;MQ0=0;MQRankSum=-0.552;QD=31.01;ReadPosRankSum=1.270;VQSLOD=4.2374;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,123,1252	0/0:10,0:10:24.05:0,24,245	0/0:32,0:30:75.12:0,75,748	0/0:19,0:17:29.90:0,30,364	0/0:29,0:29:69.14:0,69,696	1/1:0,20:20:54.17:679,54,0	1/1:3,18:21:48.15:604,48,0	0/0:33,0:33:84.13:0,84,840	0/0:28,0:28:81.18:0,81,826	0/0:37,0:37:93.20:0,93,949	0/0:21,0:21:54.12:0,54,550	0/0:29,0:29:84.19:0,84,857	0/0:25,0:25:69.15:0,69,704	0/0:21,0:21:63.14:0,63,642	0/0:23,0:23:66.15:0,66,673	0/0:22,0:22:57.13:0,57,581	0/0:16,0:16:48.04:0,48,465	0/0:22,0:22:57.12:0,57,581	0/0:10,0:10:27.06:0,27,272	0/0:26,0:26:72.15:0,72,728	0/0:36,0:36:99:0,102,1033	1/1:6,27:33:75.20:925,75,0	1/1:1,28:29:75.21:927,75,0	1/1:0,28:28:75.20:926,75,0	0/0:18,0:18:42.07:0,42,420	0/0:26,0:26:63.14:0,63,643	0/0:31,0:30:93.16:0,93,926	0/0:1,0:1:3.01:0,3,31
chr10	60869798	.	T	TA	2494.61	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-12.612;DP=541;FS=8.244;HRun=5;HaplotypeScore=83.9015;InbreedingCoeff=0.9936;MQ=73.05;MQ0=0;MQRankSum=0.305;QD=31.18;ReadPosRankSum=2.352;VQSLOD=4.1238;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:24.02:0,24,242	0/0:9,0:9:24.06:0,24,255	0/0:11,0:11:30.07:0,30,317	0/0:8,0:8:20.88:0,21,207	0/0:33,0:33:93.23:0,93,986	1/1:3,26:29:72.23:947,72,0	1/1:3,10:13:27.09:355,27,0	0/0:27,0:27:69.16:0,69,735	0/0:20,0:20:54.12:0,54,565	0/0:36,0:36:90.20:0,90,944	0/0:20,0:20:54.14:0,54,573	0/0:13,0:13:33.08:0,33,350	0/0:17,0:17:45.09:0,45,468	0/0:15,0:15:42.06:0,42,427	0/0:19,0:19:54.14:0,54,573	0/0:16,0:16:42.10:0,42,446	0/0:29,0:29:75.17:0,75,787	0/0:11,0:11:30.07:0,30,318	0/0:22,0:22:54.13:0,54,573	0/0:34,0:34:87.21:0,87,923	0/0:19,0:19:48.12:0,48,509	1/1:1,15:16:42.14:553,42,0	1/1:2,15:17:48.14:616,48,0	1/1:0,5:5:15.05:197,15,0	0/0:24,0:24:66.17:0,66,699	0/0:28,0:28:72.17:0,72,758	0/0:31,0:31:93.23:0,93,986	0/0:10,0:10:27.07:0,27,286
chr10	60871701	.	G	GT	9400.94	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=0.942;DP=394;FS=19.191;HRun=7;HaplotypeScore=54.8118;InbreedingCoeff=0.9126;MQ=84.85;MQ0=0;MQRankSum=-6.844;QD=28.66;ReadPosRankSum=6.170;VQSLOD=3.0880;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,23:27:60.10:692,60,0	1/1:0,3:3:9.03:109,9,0	0/0:14,0:14:32.96:0,33,298	0/0:17,0:17:29.41:0,29,252	1/1:1,7:8:18.06:217,18,0	1/1:1,20:21:48.15:580,48,0	1/1:1,10:11:24.07:290,24,0	0/0:35,0:35:84.12:0,84,806	1/1:1,12:13:10.14:406,10,0	1/1:5,10:15:27.08:326,27,0	1/1:4,16:20:45.13:535,45,0	1/1:1,12:13:30.09:362,30,0	1/1:0,11:11:30.09:362,30,0	1/1:0,10:10:21.06:254,21,0	1/1:3,8:11:24.07:290,24,0	1/1:0,5:5:15.05:181,15,0	1/1:4,18:22:51.16:616,51,0	1/1:2,15:17:36.11:435,36,0	1/1:4,14:19:44.90:522,45,0	1/1:1,6:7:18.06:217,18,0	1/1:1,9:10:24.07:290,24,0	1/1:1,11:12:33.10:399,33,0	1/1:2,16:18:48.15:580,48,0	1/1:0,12:12:36.11:435,36,0	1/1:3,2:5:6.02:72,6,0	1/1:1,14:15:42.13:507,42,0	1/1:1,15:16:42.13:507,42,0	1/1:0,7:7:18.06:217,18,0
chr10	60872246	.	GCACA	G	809.34	PASS	AB=0.893;AC=34;AF=0.739;AN=46;BaseQRankSum=-1.077;DP=383;FS=1.523;HRun=0;HaplotypeScore=71.4196;InbreedingCoeff=0.3768;MQ=69.83;MQ0=11;MQRankSum=-0.546;QD=3.55;ReadPosRankSum=1.431;VQSLOD=1.1399;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	1/1:8,0:8:3:28,3,0	./.	./.	1/1:13,0:13:3.01:42,3,0	0/0:12,0:11:12.04:0,12,239	0/0:15,0:19:3.01:0,3,52	0/1:27,0:27:0:0,0,0	1/1:10,3:13:3.01:46,3,0	1/1:12,0:11:6.01:61,6,0	./.	1/1:6,0:6:2.99:24,3,0	1/1:6,1:7:3.01:46,3,0	1/1:9,0:9:3.01:41,3,0	1/1:10,3:12:9.03:137,9,0	0/1:8,2:11:6.43:40,0,6	1/1:10,0:13:9:96,9,0	1/1:8,1:9:3.01:46,3,0	1/1:10,0:10:1.25:3,1,0	1/1:10,0:16:9.48:85,9,0	1/1:18,0:16:3.47:28,3,0	0/0:9,0:9:3.01:0,3,43	0/0:14,0:13:3.01:0,3,52	0/0:19,0:19:12:0,12,179	1/1:13,5:17:9.03:137,9,0	1/1:10,0:14:8.60:54,9,0	1/1:9,0:9:3:28,3,0	./.
chr10	60872388	.	AT	A	1728.28	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=7.813;DP=475;FS=3.969;HRun=6;HaplotypeScore=45.8854;InbreedingCoeff=0.9914;MQ=75.21;MQ0=0;MQRankSum=-0.667;QD=25.42;ReadPosRankSum=2.572;VQSLOD=3.6712;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:54.18:0,54,710	0/0:7,0:7:21.07:0,21,276	0/0:10,0:10:30.10:0,30,395	0/0:9,0:9:21.06:0,21,250	0/0:32,0:32:84.27:0,84,1105	1/1:1,21:22:60.15:645,60,0	1/1:0,8:8:21.05:226,21,0	0/0:34,0:34:96.26:0,96,1229	0/0:12,0:12:36.06:0,36,439	0/0:25,0:25:66.21:0,66,852	0/0:26,0:26:72.23:0,72,947	0/0:7,0:7:21.07:0,21,274	0/0:14,0:14:39.12:0,39,499	0/0:12,0:12:36.12:0,36,468	0/0:15,0:15:45.14:0,45,576	0/0:10,0:10:24.08:0,24,314	0/0:21,0:21:57.16:0,57,731	0/0:12,0:12:36.12:0,36,473	0/0:14,0:14:30.08:0,30,380	0/0:28,0:28:84.26:0,84,1079	0/0:10,0:10:27.08:0,27,342	1/1:0,6:6:15.04:161,15,0	1/1:1,17:18:48.12:516,48,0	1/1:0,14:14:33.08:355,33,0	0/0:28,0:28:81.25:0,81,1046	0/0:22,0:22:60.19:0,60,778	0/0:26,0:26:72.23:0,72,946	0/0:14,0:14:42.14:0,42,552
chr10	60872840	.	CT	C	2035.39	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.526;DP=539;FS=12.205;HRun=1;HaplotypeScore=59.0697;InbreedingCoeff=0.9706;MQ=74.70;MQ0=0;MQRankSum=-3.818;QD=37.69;ReadPosRankSum=3.068;VQSLOD=3.3001;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:51.16:0,51,783	0/0:5,0:5:15.05:0,15,240	0/0:11,0:11:33.11:0,33,502	0/0:8,0:8:15.03:0,15,195	0/0:27,0:27:81.26:0,81,1271	0/0:28,0:28:84.27:0,84,1316	0/0:10,0:10:30.09:0,30,456	0/0:37,0:37:99:0,111,1694	0/0:20,0:20:60.20:0,60,958	0/0:35,0:35:99:0,102,1611	0/0:24,0:24:69.22:0,69,1078	0/0:6,0:6:18.06:0,18,288	0/0:12,0:12:36.12:0,36,575	0/0:18,0:18:54.17:0,54,839	0/0:21,0:21:63.21:0,63,1007	0/0:23,0:23:69.22:0,69,1080	0/0:11,0:11:33.11:0,33,524	0/0:6,0:6:14.98:0,15,209	0/0:26,0:26:78.25:0,78,1208	0/0:28,0:28:84.27:0,84,1316	0/0:17,0:17:51.14:0,51,766	0/0:19,0:19:56.98:0,57,876	0/0:21,0:21:63.21:0,63,1007	0/0:9,0:9:27.09:0,27,426	0/0:15,0:15:45.15:0,45,717	1/1:1,25:26:30.27:984,30,0	0/0:31,0:30:93.32:0,93,1486	1/1:0,28:28:84.28:1172,84,0
chr10	60874176	.	TA	T	7464.50	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=7.532;DP=334;FS=6.552;HRun=7;HaplotypeScore=54.4753;InbreedingCoeff=0.8328;MQ=68.53;MQ0=3;MQRankSum=-3.084;QD=26.10;ReadPosRankSum=5.718;VQSLOD=5.0464;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,11:13:33.07:337,33,0	1/1:2,5:7:15.03:153,15,0	0/0:4,0:5:0.65:0,1,102	0/0:9,0:9:18.01:0,18,208	1/1:1,14:14:36.08:367,36,0	1/1:2,28:30:81.18:826,81,0	1/1:0,4:4:12.03:122,12,0	0/0:34,0:34:90.28:0,90,1122	1/1:1,9:10:27.06:275,27,0	1/1:1,18:19:54.12:551,54,0	1/1:1,19:19:48.11:490,48,0	1/1:0,9:9:27.06:275,27,0	1/1:1,6:6:8.97:92,9,0	1/1:0,10:10:27.06:275,27,0	1/1:1,5:6:15.03:153,15,0	1/1:1,7:7:18.04:184,18,0	1/1:0,12:12:33.07:336,33,0	1/1:1,6:7:12.02:122,12,0	1/1:3,17:19:48.10:489,48,0	1/1:0,8:8:21.04:214,21,0	1/1:0,7:7:15.03:153,15,0	1/1:0,5:5:15.03:153,15,0	1/1:1,7:8:21.05:214,21,0	1/1:1,6:7:18.04:184,18,0	1/1:0,16:16:48.11:489,48,0	1/1:1,13:14:36.08:367,36,0	1/1:2,13:14:36.08:367,36,0	1/1:0,9:9:27.06:275,27,0
chr10	60874413	.	C	CA	176.08	PASS	AC=12;AF=1.000;AN=12;DP=13;FS=0.000;HRun=0;HaplotypeScore=18.1968;MQ=58.20;MQ0=0;QD=14.67;VQSLOD=3.6813;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	1/1:2,1:3:8.93:65,9,0	1/1:1,0:1:3:25,3,0	1/1:1,0:1:3:25,3,0	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	1/1:2,0:2:5.99:50,6,0	./.	./.	./.	./.	./.	./.	1/1:1,0:1:2.98:21,3,0	1/1:0,4:4:11.47:59,11,0
chr10	60875901	.	TC	T	1708.11	PASS	AB=0.985;AC=33;AF=0.589;AN=56;BaseQRankSum=3.608;DP=446;FS=2.514;HRun=1;HaplotypeScore=84.3674;InbreedingCoeff=0.4579;MQ=79.38;MQ0=2;MQRankSum=-6.925;QD=6.40;ReadPosRankSum=0.615;VQSLOD=0.6811;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:20,1:20:8.72:73,0,9	0/1:6,0:6:14.73:27,0,15	0/0:27,0:25:51.84:0,52,734	0/0:12,0:11:22.32:0,22,333	0/1:20,0:19:32.21:106,0,32	0/0:16,0:16:36.11:0,36,543	0/0:19,0:19:51.16:0,51,776	0/0:39,0:39:99:0,110,1679	1/1:14,0:14:22.59:144,23,0	1/1:21,0:21:37.65:263,38,0	1/1:16,1:15:1.42:178,1,0	1/1:6,0:6:1.54:5,2,0	1/1:9,0:9:14.05:89,14,0	1/1:10,1:11:19.51:133,20,0	1/1:17,0:17:19.59:105,20,0	0/1:18,0:18:33.74:50,0,34	1/1:12,0:12:14.30:68,14,0	1/1:4,0:4:8.46:41,8,0	0/1:11,0:11:1.11:91,0,1	0/1:14,1:14:2:163,0,2	1/1:11,0:11:5:46,5,0	0/0:23,0:23:63.12:0,63,971	0/0:20,0:20:21.40:0,21,736	0/0:23,0:23:48.16:0,48,756	1/1:14,0:14:15.10:61,15,0	0/1:16,0:16:37.01:103,0,37	1/1:13,0:13:22:129,22,0	1/1:11,0:11:9.01:29,9,0
chr10	60875902	.	CT	C	4024.48	PASS	AB=0.545;AC=39;AF=0.696;AN=56;BaseQRankSum=1.669;DP=468;FS=19.559;HRun=2;HaplotypeScore=83.5668;InbreedingCoeff=0.8279;MQ=76.38;MQ0=2;MQRankSum=-6.502;QD=13.88;ReadPosRankSum=1.957;VQSLOD=1.7628;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,3:22:8.74:162,9,0	1/1:1,0:8:10.11:83,10,0	0/0:25,0:23:44.59:0,45,688	0/0:11,0:10:22.30:0,22,308	1/1:3,2:20:24.84:308,25,0	0/0:16,0:16:36.12:0,36,537	0/0:19,0:19:51.16:0,51,765	0/0:37,0:37:99:0,104,1613	1/1:1,6:16:26.90:235,27,0	1/1:3,6:23:50.19:580,50,0	1/1:5,11:15:15.10:257,15,0	1/1:0,0:8:8.85:64,9,0	1/1:1,4:12:3.93:126,4,0	1/1:4,7:11:2.26:80,2,0	1/1:0,5:18:20.96:199,21,0	1/1:1,3:18:14.75:124,15,0	1/1:0,3:14:26.41:199,26,0	1/1:0,2:4:9.02:95,9,0	1/1:0,2:10:26.91:285,27,0	1/1:11,3:13:30.47:344,30,0	0/1:1,10:12:4.04:70,0,4	0/0:23,0:23:68.55:0,69,951	0/0:23,0:23:56.28:0,56,796	0/0:24,0:24:48.16:0,48,735	1/1:1,2:17:8.84:158,9,0	1/1:3,3:19:16.47:295,16,0	1/1:0,6:14:23.25:246,23,0	1/1:1,1:11:11.41:116,11,0
chr10	60875904	.	G	GT	4148.62	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-0.369;DP=537;FS=5.049;HRun=12;HaplotypeScore=138.0613;InbreedingCoeff=0.6398;MQ=70.07;MQ0=2;MQRankSum=-4.553;QD=8.25;ReadPosRankSum=0.880;VQSLOD=1.9239;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:20:11.59:61,12,0	1/1:8,0:8:14.04:90,14,0	0/0:23,0:21:18.54:0,19,187	0/0:11,0:10:17.57:0,18,115	1/1:28,0:27:28.07:173,28,0	1/1:7,12:19:2.14:183,2,0	1/1:3,15:19:23:372,23,0	1/1:16,23:40:14.44:571,14,0	1/1:18,0:19:13.65:72,14,0	1/1:25,0:25:24.75:167,25,0	1/1:20,0:18:11.91:58,12,0	1/1:14,0:14:23.67:135,24,0	1/1:15,0:15:10.35:52,10,0	1/1:17,0:18:13.98:80,14,0	1/1:20,0:20:16.55:82,17,0	1/1:19,0:19:7.10:32,7,0	1/1:18,0:18:27.47:138,27,0	1/1:5,0:5:2.84:14,3,0	1/1:7,0:7:2.28:29,2,0	1/1:18,0:17:22.33:128,22,0	1/1:14,0:14:8.09:35,8,0	1/1:10,15:26:37.02:471,37,0	1/1:14,10:25:21.04:363,21,0	1/1:3,25:30:44.74:408,45,0	1/1:23,0:23:20.41:120,20,0	1/1:22,0:22:21.09:135,21,0	1/1:18,0:18:23.82:124,24,0	1/1:12,0:12:12.61:59,13,0
chr10	60877263	.	A	AATATAT	20704.91	PASS	AB=0.571;AC=39;AF=0.696;AN=56;BaseQRankSum=-10.143;DP=517;FS=9.578;HRun=0;HaplotypeScore=142.3892;InbreedingCoeff=0.9476;MQ=69.38;MQ0=0;MQRankSum=-14.924;QD=60.72;ReadPosRankSum=3.250;VQSLOD=4.7555;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,1:6:6.02:173,6,0	1/1:4,7:12:24.08:820,24,0	0/0:14,0:14:21.07:0,21,441	0/0:14,0:14:30.10:0,30,631	1/1:13,17:31:42.14:1307,42,0	0/0:26,0:26:72.21:0,72,1520	0/0:12,0:12:30.10:0,30,649	0/0:37,0:37:93.30:0,93,1922	1/1:3,6:9:18.06:616,18,0	1/1:10,19:31:66.17:1910,66,0	1/1:9,13:23:42.14:1342,42,0	1/1:9,12:22:39.13:1260,39,0	1/1:5,4:10:18.06:615,18,0	1/1:3,12:16:42.14:1407,42,0	1/1:6,8:17:36.12:1103,36,0	1/1:3,8:11:21.07:718,21,0	1/1:5,4:9:15.05:512,15,0	1/1:7,7:15:24.08:758,24,0	1/1:6,6:15:30.10:865,30,0	1/1:14,18:35:60.21:1970,60,0	0/1:1,2:4:0:0,0,0	0/0:32,0:32:90.31:0,90,1987	0/0:29,0:29:78.22:0,78,1632	0/0:12,0:12:30.08:0,30,624	1/1:8,10:20:42.14:1281,42,0	1/1:5,10:15:33.11:1130,33,0	1/1:8,22:30:57.20:1890,57,0	1/1:0,10:10:30.10:1027,30,0
chr10	60879069	.	A	ATT	12057.43	PASS	AB=1.000;AC=41;AF=0.759;AN=54;BaseQRankSum=-2.986;DP=390;FS=7.543;HRun=6;HaplotypeScore=57.8733;InbreedingCoeff=0.8623;MQ=69.86;MQ0=1;MQRankSum=-1.851;QD=38.40;ReadPosRankSum=2.768;VQSLOD=4.0558;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,17:17:42.14:710,42,0	1/1:2,4:7:12.04:203,12,0	0/0:6,0:6:12.03:0,12,142	0/1:7,0:8:8.22:8,0,161	1/1:3,22:25:60.16:984,60,0	0/0:18,0:17:54.16:0,54,647	0/0:7,0:7:18.06:0,18,220	0/0:34,0:34:84.24:0,84,1011	1/1:0,7:7:18.06:304,18,0	1/1:2,14:16:42.14:708,42,0	1/1:0,26:27:78.22:1265,78,0	1/1:0,7:8:18.06:304,18,0	1/1:1,14:15:27.09:457,27,0	1/1:1,11:12:27.05:426,27,0	1/1:2,12:14:33.11:558,33,0	1/1:1,10:11:30.10:507,30,0	1/1:2,16:18:42.14:710,42,0	1/1:2,15:17:42.14:702,42,0	1/1:3,15:19:48.15:779,48,0	1/1:0,11:11:29.99:417,30,0	1/1:1,3:4:9.03:152,9,0	0/0:3,0:3:6:0,6,61	0/0:7,0:7:21.07:0,21,256	./.	1/1:4,18:22:48.16:812,48,0	1/1:3,18:21:54.17:885,54,0	1/1:3,21:22:45:761,45,0	1/1:0,11:11:24.08:405,24,0
chr10	60879444	.	TC	T	14391.18	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=1.217;DP=636;FS=5.590;HRun=5;HaplotypeScore=69.5861;InbreedingCoeff=0.9993;MQ=71.33;MQ0=0;MQRankSum=-1.931;QD=31.98;ReadPosRankSum=6.903;VQSLOD=4.7147;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:1,35:36:99:1122,99,0	1/1:0,7:7:21.06:238,21,0	0/0:24,0:24:56.59:0,57,674	0/0:24,0:25:61.71:0,62,873	1/1:0,30:30:84.17:936,84,0	0/0:22,0:22:63.21:0,63,860	0/0:23,0:23:66.22:0,66,902	0/0:28,0:28:69.21:0,69,913	1/1:0,17:17:48.14:544,48,0	1/1:1,23:24:69.20:781,69,0	1/1:0,26:26:74.02:819,74,0	1/1:0,18:18:42.12:476,42,0	1/1:1,17:18:51.14:577,51,0	1/1:0,17:17:48.14:544,48,0	1/1:0,27:27:81.23:919,81,0	1/1:2,23:25:69.20:782,69,0	1/1:2,23:25:63.18:714,63,0	1/1:1,22:23:66.15:735,66,0	1/1:1,21:22:63.18:714,63,0	1/1:0,16:16:45.13:509,45,0	1/1:1,30:31:90.26:1020,90,0	0/0:22,0:22:66.18:0,66,876	0/0:17,0:17:51.16:0,51,680	0/0:25,0:25:72.23:0,72,966	1/1:0,20:20:60.17:680,60,0	1/1:1,33:34:99:1123,99,0	1/1:0,17:17:51.15:578,51,0	1/1:0,17:17:51.15:578,51,0
chr10	60879575	.	GCATCAGAAATACTGT	G	5967.99	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=10.977;DP=573;FS=1.899;HRun=0;HaplotypeScore=225.8368;InbreedingCoeff=0.9795;MQ=63.15;MQ0=1;MQRankSum=-10.918;QD=84.06;ReadPosRankSum=-2.595;VQSLOD=4.0839;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,105,7472	0/0:10,0:10:30.10:0,30,2249	0/0:33,0:25:69.23:0,69,4123	0/0:41,0:39:99:0,111,6424	0/0:16,0:16:42.13:0,42,2710	1/1:4,10:13:27.09:1213,27,0	1/1:4,11:15:21.07:940,21,0	0/0:30,0:30:84.29:0,84,5363	0/0:25,0:25:75.26:0,75,5593	0/0:23,0:23:63.22:0,63,4254	0/0:21,0:21:60.21:0,60,4202	0/0:16,0:16:48.16:0,48,3300	0/0:26,0:26:75.26:0,75,5092	0/0:15,0:15:45.15:0,45,3198	0/0:25,0:25:75.26:0,75,4910	0/0:22,0:22:66.21:0,66,4336	0/0:13,0:13:33.06:0,33,2006	0/0:17,0:17:45.15:0,45,3026	0/0:15,0:15:45.15:0,45,3270	0/0:16,0:16:48.12:0,48,2794	0/0:39,0:38:93.30:0,93,6494	1/1:1,12:13:33.11:1391,33,0	1/1:3,18:21:51.18:2085,51,0	1/1:1,7:8:8.47:339,8,0	0/0:13,0:13:39.13:0,39,2078	0/0:22,0:22:66.23:0,66,4523	0/0:22,0:22:66.23:0,66,4672	0/0:5,0:5:15.05:0,15,1126
chr10	60879674	.	TC	T	2164.80	PASS	AC=12;AF=0.222;AN=54;BaseQRankSum=-6.342;DP=461;FS=4.848;HRun=9;HaplotypeScore=87.5666;InbreedingCoeff=0.7793;MQ=74.04;MQ0=2;MQRankSum=-0.159;QD=20.04;ReadPosRankSum=3.615;VQSLOD=4.1346;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:31:26.36:0,26,149	0/0:6,0:6:8.83:0,9,57	0/0:28,0:23:47.18:0,47,418	0/0:26,0:23:17.81:0,18,262	0/0:13,0:18:5.68:0,6,29	1/1:4,19:23:54.01:494,54,0	1/1:5,16:21:44.99:411,45,0	0/0:11,0:23:34.51:0,35,214	0/0:6,0:15:11.36:0,11,58	1/1:4,0:6:1.55:4,2,0	0/0:3,0:9:0.58:0,1,11	0/0:9,0:15:10.47:0,10,54	0/0:5,0:23:28.56:0,29,155	0/0:3,0:10:0.47:0,0,1	0/0:6,0:21:28.54:0,29,151	0/0:3,0:8:11.36:0,11,78	0/0:6,0:15:8.65:0,9,49	0/0:6,0:22:31.55:0,32,172	0/0:11,0:14:12.03:0,12,77	0/0:2,0:5:5.81:0,6,34	./.	1/1:2,15:17:42.02:382,42,0	1/1:1,20:21:60.03:548,60,0	1/1:0,20:20:54.03:494,54,0	0/0:5,0:11:8.52:0,9,43	0/0:7,0:18:26.40:0,26,158	0/0:13,0:13:15.01:0,15,94	0/0:2,0:10:11.36:0,11,58
chr10	60880634	.	TAA	T	14229.99	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=12.628;DP=613;FS=2.609;HRun=8;HaplotypeScore=112.8670;InbreedingCoeff=0.9962;MQ=70.97;MQ0=4;MQRankSum=-1.709;QD=31.21;ReadPosRankSum=4.694;VQSLOD=4.5149;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,21:23:45.98:681,46,0	1/1:0,12:12:27.05:314,27,0	0/0:22,0:18:42.14:0,42,679	0/0:15,0:15:33.09:0,33,510	1/1:3,23:26:63.15:748,63,0	0/0:25,0:25:72.23:0,72,1192	0/0:11,0:11:27.09:0,27,454	0/0:35,0:35:93.32:0,93,1561	1/1:3,24:26:57.18:695,57,0	1/1:3,35:37:99:1195,99,0	1/1:2,27:29:78.24:945,78,0	1/1:0,17:17:48.15:586,48,0	1/1:2,6:8:15.04:183,15,0	1/1:0,16:16:45.11:533,45,0	1/1:1,21:22:57.14:679,57,0	1/1:0,17:17:48.15:586,48,0	1/1:1,21:22:54.17:659,54,0	1/1:1,21:23:56.91:671,57,0	1/1:2,18:19:48.15:586,48,0	1/1:3,42:45:99:1510,126,0	1/1:2,13:15:36.11:439,36,0	0/0:19,0:19:54.17:0,54,886	0/0:22,0:22:63.22:0,63,1065	0/0:7,0:8:20.97:0,21,355	1/1:0,31:31:81.25:988,81,0	1/1:2,27:29:81.25:988,81,0	1/1:1,23:24:69.22:842,69,0	1/1:1,11:11:33.10:403,33,0
chr10	60881010	.	C	CA	24687.08	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-1.595;DP=645;FS=0.666;HRun=1;HaplotypeScore=77.1466;InbreedingCoeff=0.9996;MQ=72.15;MQ0=0;MQRankSum=-9.620;QD=40.47;ReadPosRankSum=5.269;VQSLOD=5.1910;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,14:14:36.12:539,36,0	1/1:0,17:17:51.17:764,51,0	0/0:14,0:14:30.57:0,31,495	0/0:21,0:21:60.01:0,60,722	1/1:3,31:34:84.24:1227,84,0	1/1:0,23:23:63.21:944,63,0	1/1:1,16:17:45.15:675,45,0	1/1:1,30:31:90.30:1348,90,0	1/1:1,20:21:57.19:854,57,0	1/1:2,28:30:84.25:1201,84,0	1/1:2,28:30:78.22:1144,78,0	1/1:1,21:22:60.20:899,60,0	1/1:2,25:27:69.23:1034,69,0	1/1:1,19:20:60.20:898,60,0	1/1:2,28:30:72.24:1079,72,0	1/1:0,18:18:51.17:765,51,0	1/1:3,20:23:54.17:788,54,0	1/1:1,18:19:54.13:783,54,0	1/1:2,16:18:48.10:670,48,0	1/1:0,26:26:78.26:1168,78,0	1/1:0,21:21:63.21:944,63,0	1/1:0,24:24:69.23:1034,69,0	1/1:0,18:18:48.16:719,48,0	1/1:0,31:31:84.28:1253,84,0	1/1:0,18:18:45.15:674,45,0	1/1:0,32:32:96.33:1438,96,0	1/1:1,33:34:87.29:1304,87,0	1/1:0,12:12:36.12:539,36,0
chr10	60881299	.	T	TA	20814.51	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=4.455;DP=558;FS=0.659;HRun=1;HaplotypeScore=86.4922;InbreedingCoeff=0.9426;MQ=67.18;MQ0=0;MQRankSum=-1.646;QD=40.03;ReadPosRankSum=5.592;VQSLOD=4.9446;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,22:23:60.20:899,60,0	1/1:0,15:15:45.15:674,45,0	0/0:6,0:6:6.29:0,6,101	0/0:5,0:5:11.87:0,12,125	1/1:0,25:25:63.17:919,63,0	1/1:0,27:27:72.24:1079,72,0	1/1:0,13:13:30.10:450,30,0	0/0:27,0:27:81.25:0,81,1027	1/1:0,17:17:45.15:674,45,0	1/1:2,28:30:89.67:1306,90,0	1/1:1,29:30:87.29:1304,87,0	1/1:0,16:16:36.12:540,36,0	1/1:0,17:17:45.15:674,45,0	1/1:1,19:20:51.14:740,51,0	1/1:0,18:18:51.17:764,51,0	1/1:2,18:20:48.16:719,48,0	1/1:0,29:29:75.25:1123,75,0	1/1:1,14:15:39.13:579,39,0	1/1:0,25:25:75.25:1101,75,0	1/1:1,30:31:81.27:1208,81,0	1/1:0,8:8:15.05:225,15,0	1/1:0,19:19:54.18:809,54,0	1/1:0,22:23:66.22:982,66,0	1/1:0,16:16:48.16:719,48,0	1/1:0,31:31:78.26:1169,78,0	1/1:1,16:17:48.16:719,48,0	1/1:1,28:29:78.26:1169,78,0	1/1:0,6:6:18.06:270,18,0
chr10	60882088	.	G	GA	17998.02	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=4.420;DP=506;FS=5.768;HRun=3;HaplotypeScore=87.7898;InbreedingCoeff=0.9939;MQ=87.63;MQ0=0;MQRankSum=-7.936;QD=40.26;ReadPosRankSum=6.350;VQSLOD=3.5191;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,29:29:78.26:1169,78,0	1/1:0,8:8:21.07:315,21,0	0/0:18,0:18:54.16:0,54,677	0/0:22,0:22:63.08:0,63,750	1/1:0,28:28:81.23:1189,81,0	1/1:0,27:26:69.23:1034,69,0	1/1:0,7:7:21.07:315,21,0	0/0:19,0:19:57.18:0,57,729	1/1:0,14:14:36.12:538,36,0	1/1:1,12:13:39.13:575,39,0	1/1:0,17:17:51.17:764,51,0	1/1:1,14:15:42.14:629,42,0	1/1:0,18:19:51.17:754,51,0	1/1:1,16:17:48.16:719,48,0	1/1:1,17:19:51.17:757,51,0	1/1:0,13:13:36.12:540,36,0	1/1:0,27:27:75.25:1123,75,0	1/1:1,15:16:47.90:685,48,0	1/1:3,23:26:75.21:1035,75,0	1/1:0,24:24:60.16:874,60,0	1/1:0,15:15:36.12:540,36,0	1/1:0,8:8:18.06:269,18,0	1/1:0,12:12:33.11:495,33,0	1/1:1,12:13:33.11:495,33,0	1/1:0,20:20:51.17:764,51,0	1/1:1,22:23:66.20:949,66,0	1/1:0,18:17:48.16:719,48,0	1/1:3,16:19:54.13:753,54,0
chr10	60882301	.	A	AT	663.36	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-5.269;DP=468;FS=3.522;HRun=9;HaplotypeScore=68.9273;InbreedingCoeff=0.7194;MQ=90.37;MQ0=1;MQRankSum=2.906;QD=20.10;ReadPosRankSum=-4.311;VQSLOD=2.4067;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:86.93:0,87,745	0/0:7,0:7:18:0,18,156	0/0:20,0:21:13.47:0,13,306	0/0:20,0:18:3.46:0,3,203	0/0:16,0:17:41.01:0,41,344	0/0:22,0:22:59.98:0,60,521	0/0:9,0:9:26.97:0,27,229	1/1:8,24:33:52.06:758,52,0	0/0:19,0:19:47.98:0,48,416	0/0:15,0:15:8.68:0,9,234	0/0:13,0:13:29.99:0,30,260	0/0:19,0:19:56.97:0,57,491	0/0:22,0:22:47.97:0,48,417	0/0:8,0:8:17.98:0,18,156	0/0:22,0:22:59.97:0,60,517	0/0:12,0:12:32.98:0,33,286	0/0:24,0:24:56.97:0,57,495	0/0:15,0:15:35.96:0,36,308	0/0:21,0:21:50.99:0,51,443	0/0:11,0:11:32.99:0,33,286	0/0:10,0:10:26.98:0,27,234	0/0:4,0:4:5.98:0,6,51	0/0:13,0:13:38.99:0,39,339	0/0:21,0:21:59.99:0,60,521	0/0:18,0:18:50.98:0,51,439	0/0:16,0:16:41.36:0,41,346	0/0:16,0:15:35.99:0,36,313	0/0:9,0:9:17.98:0,18,156
chr10	60885538	.	T	TACACAC	2196.44	PASS	AB=1.000;AC=35;AF=0.673;AN=52;BaseQRankSum=2.217;DP=579;FS=0.843;HRun=0;HaplotypeScore=147.0331;InbreedingCoeff=0.6126;MQ=66.36;MQ0=11;MQRankSum=-0.534;QD=6.17;ReadPosRankSum=-2.347;VQSLOD=2.3991;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:33:9.91:0,10,137	1/1:14,0:14:11.60:184,12,0	./.	./.	0/0:19,0:19:12.51:0,13,193	0/0:21,0:21:18.06:0,18,309	0/1:25,0:26:30.59:31,0,480	0/0:25,0:25:2.51:0,3,41	0/0:14,0:14:21.07:0,21,391	1/1:14,0:21:15.08:139,15,0	1/1:10,0:17:5.12:75,5,0	1/1:13,0:26:6.62:111,7,0	1/1:5,0:8:2.99:38,3,0	1/1:11,0:16:8.13:111,8,0	1/1:15,4:22:2.68:96,3,0	1/1:10,1:23:12.32:244,12,0	1/1:13,0:19:8.15:142,8,0	1/1:11,0:10:3.37:17,3,0	1/1:12,0:12:9:104,9,0	1/1:17,0:29:8.62:115,9,0	1/1:23,0:23:12.04:166,12,0	0/0:21,0:22:18.04:0,18,287	0/0:11,0:10:3.01:0,3,48	0/0:17,0:17:18.06:0,18,328	1/1:12,0:21:4.24:85,4,0	1/1:22,0:32:34:556,34,0	1/1:19,0:26:5.49:62,5,0	1/1:7,0:7:7.27:100,7,0
chr10	60886953	.	TA	T	7982.37	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=10.437;DP=454;FS=1.380;HRun=8;HaplotypeScore=46.0859;InbreedingCoeff=0.9849;MQ=70.17;MQ0=0;MQRankSum=-2.052;QD=24.26;ReadPosRankSum=5.350;VQSLOD=4.9195;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,15:15:36.06:348,36,0	1/1:1,13:14:36.06:348,36,0	0/0:18,0:14:24.07:0,24,276	0/0:5,0:4:12.03:0,12,130	1/1:3,22:25:60.08:579,60,0	0/0:21,0:21:63.18:0,63,746	0/0:11,0:11:30.03:0,30,335	0/0:37,0:36:96.28:0,96,1140	1/1:0,13:13:39.06:377,39,0	1/1:4,21:25:63.09:604,63,0	1/1:1,17:18:48.07:463,48,0	1/1:2,13:15:30.04:290,30,0	1/1:1,9:10:27.04:261,27,0	1/1:2,17:19:42.06:406,42,0	1/1:3,10:13:27.04:261,27,0	1/1:0,7:7:21.03:203,21,0	1/1:1,15:16:45.07:434,45,0	1/1:0,12:12:33.05:318,33,0	1/1:1,13:14:42.03:390,42,0	1/1:3,26:29:78.12:747,78,0	1/1:1,5:6:15.02:145,15,0	0/0:9,0:9:24.06:0,24,278	0/0:19,0:19:51.14:0,51,602	0/0:4,0:4:12.04:0,12,145	1/1:3,12:15:36.06:348,36,0	1/1:6,18:24:43:507,43,0	1/1:1,20:21:57.09:550,57,0	1/1:1,17:18:42.07:406,42,0
chr10	60887804	.	TA	T	9985.43	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=10.356;DP=466;FS=0.000;HRun=6;HaplotypeScore=44.5834;InbreedingCoeff=0.9943;MQ=76.83;MQ0=0;MQRankSum=-2.308;QD=29.28;ReadPosRankSum=5.199;VQSLOD=4.7060;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,19:19:57.14:613,57,0	1/1:1,12:13:36.09:387,36,0	0/0:11,0:11:18.06:0,18,229	0/0:8,0:8:21.07:0,21,273	1/1:0,18:18:45.11:483,45,0	0/0:26,0:26:78.24:0,78,999	0/0:18,0:18:54.17:0,54,694	0/0:34,0:34:81.23:0,81,1016	1/1:1,12:13:30.07:322,30,0	1/1:1,25:26:75.19:806,75,0	1/1:0,35:35:99:1096,102,0	1/1:0,10:10:27.07:290,27,0	1/1:1,17:18:45.11:484,45,0	1/1:0,17:17:51.13:548,51,0	1/1:1,16:17:48.12:516,48,0	1/1:0,14:14:42.11:451,42,0	1/1:0,18:18:48.12:516,48,0	1/1:0,9:9:27.07:290,27,0	1/1:0,19:19:57.12:604,57,0	1/1:1,14:15:39.10:419,39,0	1/1:0,9:9:24.06:258,24,0	0/0:12,0:12:30.10:0,30,395	0/0:10,0:10:30.10:0,30,395	0/0:6,0:6:18.06:0,18,237	1/1:0,20:20:51.13:548,51,0	1/1:1,19:20:54.13:580,54,0	1/1:4,21:25:53.79:580,54,0	1/1:0,6:6:18.05:193,18,0
chr10	60888448	.	G	GA	15703.64	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=11.406;DP=688;FS=9.575;HRun=6;HaplotypeScore=109.0220;InbreedingCoeff=0.9997;MQ=66.61;MQ0=5;MQRankSum=-1.944;QD=32.58;ReadPosRankSum=4.648;VQSLOD=3.4898;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,29:34:87.28:1088,87,0	1/1:0,15:15:42.13:528,42,0	0/0:23,0:20:56.15:0,56,550	0/0:25,0:23:63.09:0,63,630	1/1:3,26:29:78.21:963,78,0	0/0:22,0:22:66.15:0,66,673	0/0:28,0:28:72.14:0,72,728	0/0:34,0:34:90.15:0,90,898	1/1:2,17:19:26.57:643,27,0	1/1:3,27:31:81.26:1013,81,0	1/1:2,15:17:39.08:473,39,0	1/1:2,28:29:78.22:965,78,0	1/1:0,23:23:63.20:793,63,0	1/1:3,16:19:39.12:491,39,0	1/1:3,14:17:42.13:528,42,0	1/1:1,18:19:51.16:642,51,0	1/1:2,19:21:51.16:642,51,0	1/1:0,21:21:63.20:792,63,0	1/1:2,19:21:57.18:717,57,0	1/1:2,39:41:99:1395,111,0	1/1:4,13:17:39.12:491,39,0	0/0:32,0:32:81.18:0,81,826	0/0:23,0:23:66.15:0,66,673	0/0:18,0:18:48.11:0,48,489	1/1:3,36:39:96.31:1208,96,0	1/1:0,24:24:72.17:874,72,0	1/1:2,32:34:87.25:1079,87,0	1/1:0,11:11:33.03:380,33,0
chr10	60889588	.	T	TA	12049.12	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-8.771;DP=554;FS=1.663;HRun=7;HaplotypeScore=57.6682;InbreedingCoeff=0.9943;MQ=79.90;MQ0=0;MQRankSum=-1.053;QD=30.20;ReadPosRankSum=-0.045;VQSLOD=5.1530;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,5:7:15.05:181,15,0	1/1:1,11:12:33.06:382,33,0	0/0:16,0:16:23.03:0,23,205	0/0:11,0:12:21.02:0,21,197	1/1:2,32:34:90.14:1051,90,0	0/0:30,0:30:81.10:0,81,776	0/0:14,0:14:36.05:0,36,343	1/1:5,25:30:72.22:870,72,0	1/1:0,19:19:45.14:544,45,0	1/1:2,25:27:75.22:893,75,0	1/1:6,14:20:39.12:471,39,0	1/1:1,15:16:42.13:507,42,0	1/1:2,21:23:57.17:689,57,0	1/1:1,13:14:39.12:471,39,0	1/1:1,19:20:54.17:652,54,0	1/1:3,20:23:54.17:652,54,0	1/1:2,10:12:27.08:326,27,0	1/1:0,10:10:21.06:250,21,0	1/1:4,15:19:50.95:592,51,0	1/1:5,25:30:75.19:890,75,0	1/1:2,18:20:51.16:614,51,0	0/0:23,0:23:66.11:0,66,637	0/0:12,0:12:36.05:0,36,343	0/0:22,0:22:57.07:0,57,544	1/1:3,28:31:81.25:979,81,0	0/0:20,0:20:57.07:0,57,542	1/1:2,29:32:87.22:1035,87,0	0/0:6,0:6:17.98:0,18,163
chr10	60890671	.	GC	G	11195.62	PASS	AB=0.667;AC=53;AF=0.946;AN=56;BaseQRankSum=-2.661;DP=345;FS=0.000;HRun=2;HaplotypeScore=93.1716;InbreedingCoeff=0.3457;MQ=67.34;MQ0=0;MQRankSum=-3.368;QD=33.03;ReadPosRankSum=2.719;VQSLOD=4.7789;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,14:15:42.07:523,42,0	1/1:0,6:6:15.05:195,15,0	0/1:4,4:7:50.66:119,0,51	0/0:4,2:2:0.82:0,1,16	1/1:0,16:16:42.14:541,42,0	1/1:0,10:10:21.07:272,21,0	1/1:0,7:7:21.07:272,21,0	1/1:0,6:6:18.06:233,18,0	1/1:2,11:13:21.07:272,21,0	1/1:0,9:9:27.09:350,27,0	1/1:0,19:19:48.16:621,48,0	1/1:2,13:15:39.13:506,39,0	1/1:0,15:15:42.13:537,42,0	1/1:1,7:8:21.03:253,21,0	1/1:1,17:18:42.14:544,42,0	1/1:1,12:13:36.12:466,36,0	1/1:0,15:15:42.14:544,42,0	1/1:0,2:2:6.02:78,6,0	1/1:2,4:6:14.72:166,15,0	1/1:0,23:23:66.15:834,66,0	1/1:1,14:15:36.12:463,36,0	1/1:1,12:13:33.11:428,33,0	1/1:0,14:14:36.12:466,36,0	1/1:0,10:10:29.86:343,30,0	1/1:3,17:20:45.15:583,45,0	1/1:0,10:10:30.10:389,30,0	1/1:1,25:26:72.04:924,72,0	1/1:0,7:7:21.07:272,21,0
chr10	60890843	.	T	TTTCTG	6560.04	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-11.780;DP=513;FS=0.000;HRun=0;HaplotypeScore=103.0231;InbreedingCoeff=0.9724;MQ=80.27;MQ0=0;MQRankSum=-2.201;QD=66.26;ReadPosRankSum=2.634;VQSLOD=5.5633;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:87.23:0,87,1579	0/0:8,0:8:24.07:0,24,459	0/0:11,0:11:30.10:0,30,551	0/0:17,0:17:41.99:0,42,748	0/0:24,0:24:69.22:0,69,1377	1/1:2,15:17:33.11:1002,33,0	1/1:4,2:8:6.02:172,6,0	0/0:40,0:40:96.30:0,96,1827	0/0:14,0:14:42.14:0,42,853	0/0:17,0:17:48.16:0,48,962	0/0:21,0:21:54.18:0,54,1085	0/0:14,0:14:39.13:0,39,808	0/0:12,0:12:36.12:0,36,690	0/0:12,0:12:30.07:0,30,581	0/0:20,0:20:57.15:0,57,1138	0/0:17,0:17:45.15:0,45,911	0/0:21,0:21:57.13:0,57,1116	0/0:13,0:13:39.13:0,39,808	0/0:20,0:19:54.18:0,54,1070	0/0:19,0:19:57.20:0,57,1181	0/0:12,0:12:30.10:0,30,600	1/1:2,25:27:66.23:1994,66,0	1/1:3,28:32:78.27:2332,78,0	1/1:0,13:13:36.12:1060,36,0	0/0:17,0:17:51.17:0,51,1036	0/0:18,0:18:48.16:0,48,944	0/0:28,0:27:78.27:0,78,1576	0/0:7,0:7:18.06:0,18,358
chr10	60892465	.	TC	T	7997.57	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=5.625;DP=491;FS=2.492;HRun=7;HaplotypeScore=57.5307;InbreedingCoeff=0.9902;MQ=55.78;MQ0=3;MQRankSum=1.181;QD=22.47;ReadPosRankSum=4.822;VQSLOD=4.7930;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,31:33:60.13:610,60,0	1/1:1,9:10:27.06:275,27,0	0/0:7,0:5:12.04:0,12,151	0/0:20,0:18:44.64:0,45,486	1/1:3,10:13:18.04:183,18,0	0/0:10,0:9:27.08:0,27,327	0/0:28,0:28:69.09:0,69,851	0/0:16,0:15:42.13:0,42,528	1/1:1,15:16:36.08:367,36,0	1/1:3,12:14:33.03:325,33,0	1/1:2,9:11:24.05:244,24,0	1/1:1,16:17:36.08:367,36,0	1/1:1,20:21:54.08:550,54,0	1/1:3,18:19:45.10:459,45,0	1/1:2,16:17:45.10:459,45,0	1/1:2,19:21:39.06:398,39,0	1/1:1,21:22:60.14:612,60,0	1/1:3,7:10:24.05:244,24,0	1/1:4,7:11:18.03:184,18,0	1/1:0,14:13:33.07:336,33,0	1/1:3,34:37:84.19:856,84,0	0/0:15,0:15:42.13:0,42,528	0/0:20,0:20:45.13:0,45,553	0/0:19,0:19:57.18:0,57,717	1/1:1,14:15:30.07:306,30,0	1/1:1,19:20:57.13:581,57,0	1/1:3,17:20:42.09:428,42,0	1/1:0,9:9:21.05:214,21,0
chr10	60893659	.	A	AC	13183.09	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=0.074;DP=668;FS=0.797;HRun=5;HaplotypeScore=82.8832;InbreedingCoeff=0.9918;MQ=59.77;MQ0=6;MQRankSum=3.319;QD=27.87;ReadPosRankSum=4.686;VQSLOD=4.9788;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,23:26:45.15:591,45,0	1/1:2,17:19:30.03:373,30,0	0/0:30,0:14:16.43:0,16,141	0/0:24,0:19:18.17:0,18,166	1/1:4,38:41:81.21:1026,81,0	0/0:27,0:27:66.10:0,66,693	0/0:11,0:9:20.99:0,21,202	0/0:38,0:38:99:0,105,1100	1/1:1,23:24:51.16:666,51,0	1/1:1,22:23:66.18:837,66,0	1/1:2,20:22:42.03:524,42,0	1/1:2,21:23:54.01:710,54,0	1/1:2,14:16:33.10:421,33,0	1/1:2,29:31:63.20:824,63,0	1/1:1,25:26:69.22:898,69,0	1/1:0,13:13:30.10:394,30,0	1/1:8,25:32:21.94:630,22,0	1/1:1,17:18:39.13:513,39,0	1/1:2,13:13:33.09:414,33,0	1/1:2,35:37:99:1232,99,0	1/1:2,9:11:21.07:276,21,0	0/0:22,0:22:42.07:0,42,434	0/0:22,0:22:57.14:0,57,611	0/0:20,0:20:33.05:0,33,343	1/1:3,25:28:60.20:788,60,0	1/1:2,24:26:72.19:890,72,0	1/1:3,29:30:75.24:980,75,0	1/1:1,7:7:15.05:197,15,0
chr10	60895257	.	A	AT	14152.39	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-15.394;DP=682;FS=9.122;HRun=7;HaplotypeScore=60.7853;InbreedingCoeff=0.9986;MQ=82.64;MQ0=0;MQRankSum=-3.167;QD=29.55;ReadPosRankSum=4.571;VQSLOD=5.0359;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,12:12:33.10:399,33,0	1/1:2,10:13:29.96:341,30,0	0/0:27,0:28:63.86:0,64,592	0/0:15,0:15:39.06:0,39,374	1/1:3,24:27:69.17:814,69,0	0/0:18,0:18:48.02:0,48,454	0/0:23,0:24:56.11:0,56,527	0/0:30,0:30:69.08:0,69,658	1/1:2,21:23:57.17:689,57,0	1/1:3,26:29:78.24:942,78,0	1/1:6,17:23:19.13:498,19,0	1/1:0,27:27:69.21:834,69,0	1/1:5,25:30:69.21:827,69,0	1/1:5,14:19:36.11:435,36,0	1/1:1,22:23:66.20:797,66,0	1/1:2,25:27:69.21:834,69,0	1/1:0,12:12:30.09:362,30,0	1/1:0,13:13:30.09:362,30,0	1/1:6,21:27:63.18:750,63,0	1/1:7,38:45:99:1324,111,0	1/1:2,17:19:45.14:544,45,0	0/0:30,0:30:87.09:0,87,823	0/0:34,0:34:93.15:0,93,898	0/0:24,0:24:63.10:0,63,608	1/1:0,33:33:99:1196,99,0	1/1:0,23:23:69.20:821,69,0	1/1:6,29:35:49.26:877,49,0	1/1:2,17:19:42.13:507,42,0
chr10	60896264	.	AG	A	9494.36	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=16.899;DP=679;FS=2.786;HRun=1;HaplotypeScore=190.9740;InbreedingCoeff=0.9870;MQ=61.84;MQ0=5;MQRankSum=-15.425;QD=22.71;ReadPosRankSum=1.426;VQSLOD=4.8626;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,27:34:84.05:891,84,0	1/1:0,5:5:15.03:151,15,0	0/0:47,2:34:82.95:0,83,1112	0/0:50,0:25:42.28:0,42,618	1/1:6,20:26:45.01:433,45,0	0/0:27,0:27:72.23:0,72,1027	0/0:35,0:35:99:0,99,1362	0/0:28,0:27:81.23:0,81,1101	1/1:5,15:18:33.89:417,34,0	1/1:1,23:24:60.05:687,60,0	1/1:4,9:13:26.97:281,27,0	1/1:5,26:23:59.96:650,60,0	1/1:4,20:18:42:456,42,0	1/1:5,27:27:75.11:817,75,0	1/1:7,22:25:69.03:721,69,0	1/1:2,13:11:29.97:302,30,0	1/1:0,23:29:62.95:630,63,0	1/1:2,10:10:17.51:217,18,0	1/1:0,7:5:14.98:141,15,0	1/1:6,17:23:56.90:526,57,0	1/1:4,2:6:11.51:119,12,0	0/0:21,0:21:63.20:0,63,897	0/0:21,0:21:63.20:0,63,895	0/0:30,0:30:90.30:0,90,1315	1/1:4,14:17:45.09:473,45,0	1/1:0,26:24:63.39:646,63,0	1/1:8,18:23:53.75:580,54,0	1/1:2,11:13:33.08:357,33,0
chr10	60896268	.	AAGAAG	A	12080.10	PASS	AB=1.000;AC=41;AF=0.732;AN=56;BaseQRankSum=16.838;DP=681;FS=12.464;HRun=0;HaplotypeScore=218.6373;InbreedingCoeff=0.8984;MQ=60.77;MQ0=6;MQRankSum=-15.127;QD=26.26;ReadPosRankSum=1.104;VQSLOD=3.3081;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,22:34:88.03:1047,88,0	1/1:0,5:5:15.05:251,15,0	0/0:52,0:35:43.74:0,44,886	0/1:48,0:21:10.31:10,0,470	1/1:13,16:29:62.56:743,63,0	0/0:28,0:28:77.99:0,78,1795	0/0:34,0:34:98.89:0,99,1906	0/0:31,0:30:90.19:0,90,1765	1/1:5,14:17:45.03:661,45,0	1/1:10,14:24:53.96:761,54,0	1/1:12,2:14:23.34:202,23,0	1/1:13,18:23:60.42:789,60,0	1/1:8,16:18:53.91:652,54,0	1/1:11,18:24:71.97:925,72,0	1/1:9,16:21:60.04:812,60,0	1/1:4,11:11:29.98:398,30,0	1/1:13,18:29:57.53:831,58,0	1/1:7,4:9:23.85:256,24,0	1/1:5,2:4:8.97:94,9,0	1/1:9,12:21:51.44:695,51,0	1/1:5,0:5:11.83:78,12,0	0/0:22,0:22:66.03:0,66,1715	0/0:22,0:22:65.75:0,66,1663	0/0:31,0:31:90.25:0,90,2511	1/1:6,10:15:45:608,45,0	1/1:7,19:24:65.90:993,66,0	1/1:14,15:25:56.91:755,57,0	1/1:4,9:13:36.04:522,36,0
chr10	60896269	.	AG	A	3829.13	PASS	AB=0.917;AC=39;AF=0.696;AN=56;BaseQRankSum=16.757;DP=677;FS=0.000;HRun=1;HaplotypeScore=205.5113;InbreedingCoeff=0.8733;MQ=60.79;MQ0=6;MQRankSum=-16.628;QD=9.41;ReadPosRankSum=3.825;VQSLOD=1.4089;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:28,8:33:65.41:468,65,0	1/1:5,0:5:13.78:61,14,0	0/0:53,0:35:66.19:0,66,1096	0/0:48,0:20:37.29:0,37,575	1/1:20,9:29:56.81:389,57,0	0/0:28,0:28:78.23:0,78,1148	0/0:35,0:35:99:0,105,1511	0/0:31,0:30:90.29:0,90,1339	1/1:16,2:16:8.50:152,9,0	1/1:23,1:24:34.59:196,35,0	1/1:9,5:14:4.66:101,5,0	1/1:26,4:22:30.62:214,31,0	1/1:20,4:18:38.04:234,38,0	1/1:27,2:24:28.30:235,28,0	1/1:22,3:21:17.66:179,18,0	1/1:13,2:11:25.81:135,26,0	1/1:31,0:29:18.34:266,18,0	0/1:10,1:9:1.98:64,0,2	1/1:7,0:4:4.82:24,5,0	1/1:17,4:21:33.20:260,33,0	1/1:2,3:5:5.95:22,6,0	0/0:22,0:22:66.21:0,66,984	0/0:22,0:22:66.21:0,66,984	0/0:31,0:31:93.28:0,93,1377	1/1:14,2:15:20.61:164,21,0	1/1:26,0:24:57.06:288,57,0	1/1:19,9:24:39.10:241,39,0	1/1:12,1:13:30.19:136,30,0
chr10	60898142	.	A	AGTATGTGTCAGG	8586.97	PASS	AB=0.889;AC=52;AF=0.963;AN=54;BaseQRankSum=-0.639;DP=284;FS=0.000;HRun=0;HaplotypeScore=313.3565;InbreedingCoeff=0.0951;MQ=51.50;MQ0=0;MQRankSum=-2.378;QD=30.24;ReadPosRankSum=3.213;VQSLOD=3.4689;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:4:11.97:99,12,0	1/1:2,0:2:5.96:46,6,0	1/1:0,1:2:6.02:369,6,0	0/1:5,0:7:99:207,0,129	1/1:30,0:30:81.17:1234,81,0	1/1:22,0:22:48.07:463,48,0	1/1:7,0:7:15:134,15,0	1/1:10,0:10:27.09:406,27,0	1/1:5,0:5:8.44:70,8,0	1/1:20,0:20:60.08:905,60,0	1/1:18,0:18:50.64:533,51,0	1/1:17,0:17:38.92:398,39,0	1/1:11,0:11:33:363,33,0	1/1:5,0:5:8.84:78,9,0	1/1:6,0:6:18.02:166,18,0	1/1:6,0:6:15.03:165,15,0	./.	1/1:1,0:1:3.01:40,3,0	0/1:2,0:2:0:0,0,0	1/1:20,0:20:49.26:621,49,0	1/1:2,0:2:6.01:130,6,0	1/1:18,0:18:47.82:448,48,0	1/1:20,0:20:52.48:402,52,0	1/1:4,0:4:2.96:19,3,0	1/1:20,0:20:57.08:548,57,0	1/1:9,0:9:24.08:336,24,0	1/1:15,0:15:27.84:371,28,0	1/1:1,0:1:3.01:38,3,0
chr10	60898475	.	AGAG	A	5516.48	PASS	AB=1.000;AC=40;AF=0.714;AN=56;BaseQRankSum=-3.338;DP=565;FS=1.919;HRun=0;HaplotypeScore=123.6085;InbreedingCoeff=0.7062;MQ=46.22;MQ0=6;MQRankSum=-1.204;QD=12.89;ReadPosRankSum=-1.144;VQSLOD=4.6650;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:19:39.97:265,40,0	1/1:10,1:11:28.25:198,28,0	0/0:22,0:7:15.40:0,15,118	0/1:14,0:5:3.83:4,0,14	1/1:8,32:40:69.06:441,69,0	0/0:32,0:31:48.72:0,49,470	0/0:11,0:11:28.26:0,28,198	0/1:21,0:18:3.25:3,0,301	1/1:18,0:18:33.87:225,34,0	1/1:22,0:20:5.92:379,6,0	1/1:14,18:32:49.68:349,50,0	1/1:21,0:20:20.33:276,20,0	1/1:29,1:30:50.72:427,51,0	1/1:12,0:11:26.58:175,27,0	1/1:25,0:24:34.69:363,35,0	1/1:16,0:16:17.43:213,17,0	1/1:19,0:19:20.18:261,20,0	1/1:7,0:7:18.15:118,18,0	1/1:15,0:12:25.50:167,26,0	1/1:1,19:20:38.57:260,39,0	0/1:6,0:6:8.11:69,0,8	0/0:27,0:25:43.85:0,44,403	0/0:24,0:22:32.76:0,33,325	0/0:19,0:19:20.47:0,20,283	1/1:25,0:25:42.88:434,43,0	1/1:23,0:21:23.79:339,24,0	0/1:22,0:22:8.97:312,0,9	1/1:10,0:10:29.88:239,30,0
chr10	60901141	.	T	TGTGGGGG	29965.16	PASS	AB=1.000;AC=48;AF=0.857;AN=56;BaseQRankSum=1.437;DP=592;FS=0.967;HRun=0;HaplotypeScore=147.0859;InbreedingCoeff=0.6861;MQ=62.11;MQ0=0;MQRankSum=-12.111;QD=58.76;ReadPosRankSum=4.771;VQSLOD=4.6967;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:57,1:60:92.34:2676,92,0	1/1:11,0:11:23.80:641,24,0	0/0:27,0:24:63.21:0,63,1369	0/0:22,0:22:57.13:0,57,1092	1/1:16,0:18:21.06:580,21,0	1/1:13,0:13:30.09:871,30,0	1/1:18,0:18:39.07:909,39,0	0/0:33,0:33:93.27:0,93,2269	1/1:26,0:26:69.03:2173,69,0	0/1:8,0:8:38.01:286,0,38	1/1:16,0:16:26.83:845,27,0	1/1:16,0:20:45:1300,45,0	1/1:25,0:25:60.05:1780,60,0	1/1:31,8:43:93.26:3243,93,0	1/1:21,0:21:57.04:1568,57,0	1/1:23,0:23:53.40:1558,53,0	1/1:17,1:18:33.02:933,33,0	0/1:14,0:14:12.46:696,0,12	1/1:18,1:18:51.03:992,51,0	1/1:22,4:28:66.12:1785,66,0	1/1:16,0:16:26.72:506,27,0	1/1:13,0:14:38.93:714,39,0	1/1:8,0:11:15.04:394,15,0	1/1:19,0:19:28.35:617,28,0	1/1:17,7:25:57.19:1921,57,0	1/1:20,0:20:53.90:1132,54,0	1/1:20,0:20:57.08:1680,57,0	1/1:2,0:4:6.02:164,6,0
chr10	60901142	.	G	GT	7593.52	PASS	AB=0.823;AC=45;AF=0.804;AN=56;BaseQRankSum=8.453;DP=570;FS=2.759;HRun=1;HaplotypeScore=173.1051;InbreedingCoeff=0.6201;MQ=61.51;MQ0=0;MQRankSum=-10.535;QD=15.79;ReadPosRankSum=8.326;VQSLOD=4.8369;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:41,16:57:82.56:805,83,0	1/1:6,4:11:16.68:171,17,0	0/0:25,0:22:63.08:0,63,792	0/0:22,0:22:57.43:0,57,741	1/1:13,5:18:12.53:151,13,0	1/1:5,7:12:3.43:194,3,0	1/1:11,7:18:11.20:271,11,0	0/0:34,0:34:93.29:0,93,1265	1/1:9,17:26:55.14:542,55,0	0/0:8,0:8:15.96:0,16,89	1/1:10,6:16:22.09:226,22,0	1/1:10,10:20:32.26:321,32,0	1/1:10,14:24:39.07:426,39,0	1/1:7,27:34:84.56:736,85,0	1/1:9,12:21:14.96:353,15,0	1/1:10,12:22:21.65:376,22,0	1/1:11,6:17:28.02:254,28,0	1/1:9,3:12:6.83:152,7,0	1/1:13,5:17:15.26:296,15,0	1/1:16,12:28:16.64:408,17,0	0/1:13,3:16:25.77:52,0,26	1/1:10,4:14:26.08:262,26,0	1/1:8,3:11:8.09:108,8,0	0/1:15,4:19:4.72:138,0,5	1/1:9,15:24:29.71:406,30,0	1/1:13,7:20:51.71:434,52,0	1/1:7,12:19:56.57:487,57,0	0/1:3,1:4:6.54:27,0,7
chr10	60901144	.	G	GGGGGGT	26129.62	PASS	AB=0.625;AC=49;AF=0.875;AN=56;BaseQRankSum=6.847;DP=610;FS=0.467;HRun=0;HaplotypeScore=177.6157;InbreedingCoeff=0.7975;MQ=61.14;MQ0=0;MQRankSum=-13.091;QD=49.77;ReadPosRankSum=7.195;VQSLOD=4.3870;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:28,16:59:61.34:2566,61,0	1/1:3,3:11:21.07:569,21,0	0/0:28,0:25:63.17:0,63,1263	0/0:21,0:21:51.07:0,51,892	1/1:10,5:18:21.06:484,21,0	1/1:1,4:12:30.08:826,30,0	1/1:10,2:24:42.13:1138,42,0	0/0:36,0:36:99:0,102,1900	1/1:4,17:26:70.48:1925,70,0	1/1:5,0:10:17.84:355,18,0	1/1:2,6:17:27.01:683,27,0	1/1:8,10:20:45.15:1186,45,0	1/1:6,13:30:53.73:1386,54,0	1/1:7,26:34:93.32:2506,93,0	1/1:4,11:22:56.85:1550,57,0	1/1:3,12:23:44.61:1216,45,0	1/1:7,6:17:33.11:913,33,0	0/1:6,3:15:21.55:593,0,22	1/1:7,5:20:39.12:848,39,0	1/1:11,12:26:56.92:1422,57,0	1/1:5,3:22:17.33:400,17,0	1/1:8,1:15:24.07:574,24,0	1/1:4,2:9:15.05:433,15,0	1/1:6,8:20:27.86:649,28,0	1/1:7,15:24:60.20:1554,60,0	1/1:12,7:25:38.90:997,39,0	1/1:5,12:20:45.01:1220,45,0	1/1:3,0:4:6.02:135,6,0
chr10	60901603	.	AT	A	12605.44	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=3.829;DP=642;FS=3.048;HRun=9;HaplotypeScore=64.3436;InbreedingCoeff=0.9988;MQ=58.69;MQ0=1;MQRankSum=2.998;QD=22.43;ReadPosRankSum=8.299;VQSLOD=4.2857;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:6,38:44:99:1016,111,0	1/1:1,13:14:33.02:302,33,0	0/0:24,0:19:39.11:0,39,448	0/0:17,0:14:36.11:0,36,413	1/1:3,16:19:39:357,39,0	1/1:3,16:19:45.02:412,45,0	1/1:4,17:21:48.02:439,48,0	0/0:38,0:39:99:0,108,1183	1/1:2,21:24:48.22:510,48,0	1/1:8,26:34:77.86:714,78,0	1/1:3,13:17:39.02:357,39,0	1/1:1,26:27:69.04:632,69,0	1/1:2,24:26:66.02:604,66,0	1/1:2,17:19:48.02:439,48,0	1/1:2,26:28:75.04:687,75,0	1/1:2,18:20:54.03:494,54,0	1/1:1,29:30:84.05:769,84,0	1/1:4,23:27:66.04:604,66,0	1/1:3,13:15:35.99:323,36,0	1/1:2,16:18:42.02:384,42,0	1/1:2,16:18:42.02:384,42,0	1/1:2,17:19:48.01:439,48,0	1/1:1,14:15:38.85:357,39,0	1/1:1,27:28:75.04:687,75,0	1/1:3,24:27:31.41:542,31,0	1/1:4,14:18:42.02:384,42,0	1/1:1,23:24:60.03:549,60,0	1/1:0,10:10:24.01:220,24,0
chr10	60902655	.	C	CA	17939.45	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-6.336;DP=603;FS=19.685;HRun=6;HaplotypeScore=56.4427;InbreedingCoeff=0.9973;MQ=82.44;MQ0=0;MQRankSum=-8.243;QD=31.64;ReadPosRankSum=5.107;VQSLOD=3.0303;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,27:29:78.21:963,78,0	1/1:1,10:11:30.10:377,30,0	0/0:17,0:16:36.07:0,36,358	0/0:19,0:19:22.09:0,22,346	1/1:3,31:34:96.26:1188,96,0	1/1:4,25:29:75.24:943,75,0	1/1:2,13:15:39.12:491,39,0	1/1:6,28:34:81.26:1018,81,0	1/1:2,17:19:48.15:604,48,0	1/1:3,37:40:99:1381,111,0	1/1:1,17:18:48.11:586,48,0	1/1:4,17:21:42.13:528,42,0	1/1:1,19:20:45.14:566,45,0	1/1:0,13:13:39.12:491,39,0	1/1:3,25:28:57.18:717,57,0	1/1:3,15:18:39.12:491,39,0	1/1:0,24:24:69.22:868,69,0	1/1:5,15:20:45.14:566,45,0	1/1:3,14:17:42.12:517,42,0	1/1:2,24:26:69.22:868,69,0	1/1:0,11:11:30.10:377,30,0	1/1:3,20:23:54.17:679,54,0	1/1:3,16:19:48.15:604,48,0	1/1:2,11:13:33.11:415,33,0	1/1:2,22:24:57.18:717,57,0	1/1:1,15:16:45.14:566,45,0	1/1:4,29:33:81.26:1013,81,0	1/1:1,11:12:33.10:405,33,0
chr10	60902722	.	GAT	G	1502.19	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=12.037;DP=553;FS=10.550;HRun=0;HaplotypeScore=99.0814;InbreedingCoeff=0.9821;MQ=80.07;MQ0=0;MQRankSum=-10.436;QD=20.58;ReadPosRankSum=-0.668;VQSLOD=3.2644;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:63.22:0,63,1206	0/0:12,0:12:36.12:0,36,685	0/0:21,0:21:59.73:0,60,979	0/0:11,0:10:22.27:0,22,423	0/0:33,0:33:93.32:0,93,1795	1/1:5,26:31:78.64:814,79,0	1/1:4,3:7:12.02:120,12,0	0/0:22,0:22:63.22:0,63,1181	0/0:14,0:14:42.12:0,42,745	0/0:31,0:31:93.20:0,93,1708	0/0:24,0:24:72.25:0,72,1390	0/0:19,0:19:57.20:0,57,1092	0/0:25,0:25:66.23:0,66,1249	0/0:19,0:19:57.20:0,57,1100	0/0:24,0:24:63.22:0,63,1217	0/0:17,0:17:45.15:0,45,869	0/0:26,0:26:60.21:0,60,1158	0/0:14,0:14:42.09:0,42,739	0/0:19,0:19:57.17:0,57,1060	0/0:32,0:32:96.33:0,96,1845	0/0:7,0:7:21.07:0,21,405	1/1:3,10:13:30.06:303,30,0	1/1:3,11:14:33.07:333,33,0	1/1:2,6:8:11.30:103,11,0	0/0:23,0:23:63.21:0,63,1185	0/0:15,0:15:45.15:0,45,869	0/0:36,0:36:99:0,105,1965	0/0:12,0:12:27.09:0,27,516
chr10	60902727	.	ATAGTG	A	2703.74	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=12.042;DP=535;FS=10.904;HRun=0;HaplotypeScore=120.4844;InbreedingCoeff=0.9754;MQ=77.48;MQ0=0;MQRankSum=-10.783;QD=48.28;ReadPosRankSum=-0.385;VQSLOD=3.6045;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:69.24:0,69,2132	0/0:13,0:13:39.12:0,39,1162	0/0:17,0:18:51.17:0,51,1447	0/0:9,0:8:18.17:0,18,656	0/0:36,0:36:99:0,105,3257	1/1:1,25:26:77.07:1391,77,0	1/1:0,3:3:9.03:167,9,0	0/0:22,0:22:63.22:0,63,1990	0/0:13,0:13:39.13:0,39,1163	0/0:30,0:30:90.31:0,90,2954	0/0:25,0:25:75.26:0,75,2461	0/0:20,0:20:60.21:0,60,1942	0/0:22,0:22:60.21:0,60,1972	0/0:21,0:21:63.22:0,63,2032	0/0:25,0:25:66.23:0,66,2135	0/0:17,0:17:45.15:0,45,1472	0/0:26,0:26:63.22:0,63,2034	0/0:13,0:13:39.13:0,39,1236	0/0:19,0:19:57.20:0,57,1796	0/0:31,0:31:93.32:0,93,3033	0/0:7,0:7:21.07:0,21,699	1/1:0,9:9:27.09:495,27,0	1/1:1,10:11:33.11:610,33,0	1/1:1,6:7:11.80:209,12,0	0/0:24,0:24:66.23:0,66,2139	0/0:15,0:15:45.15:0,45,1373	0/0:36,0:36:99:0,105,3326	0/0:12,0:12:29.24:0,29,959
chr10	60905408	.	TAACAACAACAACAACAACAACAACAAC	T	16572.41	PASS	AC=34;AF=0.680;AN=50;BaseQRankSum=10.408;DP=489;FS=2.750;HRun=0;HaplotypeScore=375.4569;InbreedingCoeff=0.8544;MQ=65.71;MQ0=4;MQRankSum=-7.232;QD=52.11;ReadPosRankSum=4.317;VQSLOD=2.6115;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:10,5:15:12.04:801,12,0	./.	./.	0/0:14,0:14:9.02:0,9,179	1/1:17,8:25:18.06:1176,18,0	0/0:15,0:25:39.13:0,39,3639	0/0:8,0:11:18.03:0,18,1102	0/0:16,0:15:12.04:0,12,461	1/1:12,7:19:18.06:1257,18,0	1/1:14,8:22:24.04:848,24,0	1/1:10,8:18:18.06:1257,18,0	1/1:8,10:18:27.09:1886,27,0	1/1:14,5:19:15.05:1048,15,0	1/1:16,5:21:12.04:838,12,0	1/1:16,10:26:21.07:1467,21,0	1/1:11,4:15:6.01:419,6,0	1/1:8,3:11:6.02:419,6,0	./.	1/1:10,4:13:11.94:458,12,0	1/1:15,8:23:18.06:1044,18,0	0/0:7,0:7:2.04:0,2,6	0/0:27,0:27:54.17:0,54,4727	0/0:18,0:18:36.10:0,36,3349	0/0:25,0:25:48.15:0,48,4357	1/1:7,5:12:15.05:1017,15,0	1/1:19,10:29:30.05:1380,30,0	1/1:8,10:18:14.43:1046,14,0	1/1:11,2:13:3.01:210,3,0
chr10	60905849	.	AC	A	17036.98	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=10.614;DP=691;FS=0.601;HRun=1;HaplotypeScore=71.5090;InbreedingCoeff=0.9710;MQ=96.57;MQ0=0;MQRankSum=-4.078;QD=38.03;ReadPosRankSum=4.577;VQSLOD=5.2997;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,47:47:99:1843,132,0	1/1:0,16:16:39.13:545,39,0	0/0:43,0:43:99:0,129,1907	0/0:24,0:24:72.18:0,72,1042	1/1:0,16:16:48.12:649,48,0	0/0:27,0:27:81.25:0,81,1241	0/0:19,0:19:57.17:0,57,868	0/0:33,0:33:93.30:0,93,1410	1/1:0,26:26:66.22:922,66,0	1/1:0,22:22:63.17:829,63,0	1/1:0,9:9:27:333,27,0	1/1:0,17:17:45.15:629,45,0	1/1:0,26:26:69.23:965,69,0	1/1:2,18:20:57.18:782,57,0	1/1:0,23:23:63.21:881,63,0	1/1:0,19:19:54.18:755,54,0	1/1:0,40:40:99:1531,111,0	1/1:0,18:18:45.11:607,45,0	1/1:0,27:27:81.22:1072,81,0	1/1:0,24:24:72.15:960,72,0	1/1:0,26:26:72.24:1006,72,0	0/0:29,0:29:87.25:0,87,1292	0/0:23,0:23:63.20:0,63,952	0/0:45,0:45:99:0,135,2052	1/1:0,19:19:45.15:629,45,0	1/1:0,26:26:78.22:1050,78,0	1/1:0,26:26:72.24:1007,72,0	1/1:0,1:1:3.01:42,3,0
chr10	60907228	.	T	TA	10223.88	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-11.586;DP=493;FS=10.802;HRun=8;HaplotypeScore=42.0412;InbreedingCoeff=0.9647;MQ=89.89;MQ0=0;MQRankSum=-4.502;QD=27.86;ReadPosRankSum=2.932;VQSLOD=4.7423;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,15:19:39.12:450,39,0	1/1:1,3:4:12.01:126,12,0	0/0:24,0:24:62.94:0,63,558	0/0:13,0:14:19.69:0,20,140	1/1:2,22:24:66.13:745,66,0	0/0:22,0:22:60.01:0,60,545	0/0:5,0:5:9:0,9,82	0/0:23,0:23:57.02:0,57,522	1/1:0,17:17:39.12:450,39,0	1/1:2,22:24:66.18:749,66,0	1/1:1,21:22:60.01:644,60,0	1/1:1,12:13:33.08:381,33,0	1/1:2,12:14:36.10:408,36,0	1/1:5,22:27:48.14:554,48,0	1/1:1,20:21:51.15:589,51,0	1/1:5,11:16:33.09:373,33,0	1/1:1,12:13:30.09:346,30,0	1/1:2,2:4:6.02:69,6,0	1/1:2,17:19:51.10:558,51,0	1/1:8,18:26:44.74:760,45,0	1/1:3,16:19:45.13:519,45,0	0/0:8,0:8:21:0,21,192	0/0:21,0:21:54.03:0,54,494	0/0:9,0:9:24.01:0,24,220	1/1:2,17:19:57.17:658,57,0	1/1:2,14:16:48.14:550,48,0	1/1:4,28:32:20.30:742,20,0	1/1:1,17:18:48.14:554,48,0
chr10	60907324	.	G	GT	11858.26	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-6.007;DP=400;FS=3.522;HRun=6;HaplotypeScore=39.2341;InbreedingCoeff=0.9202;MQ=73.68;MQ0=0;MQRankSum=-1.482;QD=33.03;ReadPosRankSum=4.668;VQSLOD=4.5586;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,4:9:24.08:297,24,0	1/1:2,5:7:15.05:189,15,0	0/0:8,0:8:10.93:0,11,124	0/0:6,0:6:11.98:0,12,113	1/1:5,19:24:72.22:891,72,0	1/1:1,12:13:33.11:415,33,0	1/1:0,5:5:15.05:189,15,0	0/0:27,0:27:63.13:0,63,643	1/1:3,8:11:30.08:364,30,0	1/1:0,15:15:45.13:553,45,0	1/1:3,13:16:39.12:491,39,0	1/1:1,10:11:24.08:302,24,0	1/1:0,16:16:42.13:528,42,0	1/1:3,9:12:27.09:340,27,0	1/1:0,17:17:51.16:642,51,0	1/1:0,23:23:63.20:793,63,0	1/1:0,9:9:27.09:340,27,0	1/1:2,2:4:6.02:75,6,0	1/1:3,13:16:39.12:491,39,0	1/1:3,24:27:72.19:888,72,0	1/1:2,7:9:27.09:339,27,0	1/1:1,7:8:18.06:226,18,0	1/1:0,13:13:33.11:416,33,0	1/1:1,8:9:24.08:302,24,0	1/1:1,18:19:51.16:642,51,0	1/1:1,19:20:60.19:752,60,0	1/1:8,27:35:90.29:1131,90,0	1/1:4,7:11:21.07:264,21,0
chr10	60909444	.	TA	T	15203.29	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-6.142;DP=659;FS=1.048;HRun=7;HaplotypeScore=68.1150;InbreedingCoeff=0.9927;MQ=68.55;MQ0=8;MQRankSum=0.160;QD=26.49;ReadPosRankSum=8.175;VQSLOD=4.0540;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,29:35:75.16:765,75,0	1/1:3,5:8:15.03:153,15,0	0/0:30,0:19:51.14:0,51,596	0/0:23,0:16:39.10:0,39,453	1/1:1,35:36:99:1010,99,0	1/1:0,31:31:84.19:857,84,0	1/1:1,28:29:81.18:826,81,0	0/0:32,0:31:90.16:0,90,1040	1/1:1,14:15:36.08:367,36,0	1/1:1,24:25:72.16:734,72,0	1/1:2,21:23:63.14:642,63,0	1/1:1,23:24:69.16:704,69,0	1/1:2,23:25:63.14:643,63,0	1/1:1,21:22:60.14:612,60,0	1/1:4,26:30:75.16:765,75,0	1/1:1,12:13:36.08:367,36,0	1/1:1,35:36:99:1071,105,0	1/1:0,20:20:54.12:551,54,0	1/1:1,15:14:36.08:367,36,0	1/1:1,22:23:60.13:612,60,0	1/1:3,23:26:69.16:704,69,0	1/1:3,20:23:60.13:612,60,0	1/1:2,15:17:42.09:428,42,0	1/1:0,14:14:36.08:367,36,0	1/1:4,18:22:48.10:490,48,0	1/1:1,27:28:78.16:788,78,0	1/1:2,20:21:54.12:551,54,0	1/1:0,11:11:21.05:214,21,0
chr10	60910224	.	CA	C	3699.44	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=4.857;DP=734;FS=0.832;HRun=2;HaplotypeScore=83.0441;InbreedingCoeff=0.9856;MQ=57.62;MQ0=3;MQRankSum=2.496;QD=33.94;ReadPosRankSum=-1.686;VQSLOD=3.1126;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,126,1838	0/0:11,0:11:33.11:0,33,494	0/0:35,0:20:57.11:0,57,773	0/0:24,0:17:42.14:0,42,612	0/0:29,0:29:87.27:0,87,1282	1/1:0,31:31:81.26:1051,81,0	1/1:0,8:8:21.07:273,21,0	0/0:37,0:37:99:0,108,1598	0/0:30,0:30:87.27:0,87,1264	0/0:32,0:32:93.32:0,93,1394	0/0:28,0:28:81.26:0,81,1189	0/0:29,0:29:84.27:0,84,1223	0/0:26,0:26:78.26:0,78,1169	0/0:15,0:15:45.15:0,45,673	0/0:29,0:29:87.29:0,87,1302	0/0:21,0:21:60.20:0,60,899	0/0:36,0:36:99:0,108,1616	0/0:24,0:24:72.23:0,72,1052	0/0:26,0:23:63.19:0,63,922	0/0:37,0:37:99:0,105,1555	0/0:30,0:29:87.28:0,87,1283	1/1:0,23:23:57.19:740,57,0	1/1:1,25:26:66.58:818,67,0	1/1:0,21:21:63.20:818,63,0	0/0:15,0:15:45.14:0,45,647	0/0:29,0:29:87.29:0,87,1304	0/0:35,0:35:99:0,105,1569	0/0:3,0:3:9.03:0,9,135
chr10	60910658	.	CA	C	11660.62	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=4.150;DP=554;FS=17.634;HRun=9;HaplotypeScore=59.2521;InbreedingCoeff=0.9894;MQ=66.18;MQ0=1;MQRankSum=-3.130;QD=23.23;ReadPosRankSum=6.639;VQSLOD=3.4982;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,18:23:50.79:466,51,0	1/1:3,14:17:42.02:384,42,0	0/0:13,0:11:26.10:0,26,274	0/0:10,0:10:15.65:0,16,194	1/1:4,22:26:66.03:602,66,0	1/1:0,19:19:57.03:522,57,0	1/1:0,18:18:48.03:439,48,0	0/0:29,0:29:69.21:0,69,796	1/1:4,10:14:27.01:247,27,0	1/1:6,23:29:72.02:656,72,0	1/1:5,18:23:51.01:467,51,0	1/1:1,20:21:60.03:549,60,0	1/1:3,18:21:47.94:439,48,0	1/1:1,18:19:48.03:439,48,0	1/1:0,23:23:63.03:577,63,0	1/1:2,20:22:60.03:549,60,0	1/1:1,19:20:54.02:494,54,0	1/1:4,6:10:20.98:186,21,0	1/1:3,24:28:71.06:631,71,0	1/1:3,30:33:83.08:747,83,0	1/1:0,13:13:39.02:357,39,0	1/1:0,26:26:72.03:659,72,0	1/1:3,21:24:57.03:522,57,0	1/1:0,7:7:18.01:165,18,0	1/1:0,18:18:48.03:439,48,0	1/1:0,16:16:48.03:439,48,0	1/1:2,19:21:48.02:439,48,0	1/1:1,10:11:27.01:246,27,0
chr10	60911000	.	G	GATGGCAACAGAGGTGTAATA	118947.48	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-4.026;DP=752;FS=10.667;HRun=0;HaplotypeScore=332.0190;InbreedingCoeff=0.9933;MQ=78.46;MQ0=0;MQRankSum=-13.780;QD=177.27;ReadPosRankSum=6.242;VQSLOD=3.9275;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:18,7:28:60.21:4159,60,0	1/1:10,3:13:39.13:2174,39,0	0/0:24,0:24:69.24:0,69,2904	0/0:34,0:34:93.29:0,93,3722	1/1:19,17:42:91.21:4980,91,0	1/1:20,11:33:84.29:6212,84,0	1/1:25,1:26:75.21:4675,75,0	0/0:23,0:23:60.21:0,60,2769	1/1:15,10:28:75.26:5822,75,0	1/1:17,15:37:93.28:6658,93,0	1/1:17,10:28:72.25:4057,72,0	1/1:10,7:20:51.18:4022,51,0	1/1:15,12:30:81.28:6265,81,0	1/1:10,9:21:57.20:4459,57,0	1/1:17,26:44:99:10546,123,0	1/1:18,6:25:66.23:4740,66,0	1/1:9,4:16:30.10:2191,30,0	1/1:4,2:6:15.01:826,15,0	1/1:11,5:21:54.13:3014,54,0	1/1:26,17:44:99:8042,123,0	1/1:11,1:15:24.04:1723,24,0	1/1:16,9:29:81.23:4992,81,0	1/1:15,8:30:57.02:3600,57,0	1/1:13,4:20:42.14:3480,42,0	1/1:15,7:23:60.21:4612,60,0	1/1:22,13:41:42.63:8250,43,0	1/1:17,14:35:96.33:7270,96,0	1/1:8,3:13:33.11:2181,33,0
chr10	60911655	.	C	CT	11708.79	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-5.599;DP=532;FS=0.796;HRun=7;HaplotypeScore=86.3777;InbreedingCoeff=0.9819;MQ=67.78;MQ0=0;MQRankSum=-1.982;QD=30.33;ReadPosRankSum=2.453;VQSLOD=5.0034;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,15:16:45.14:543,45,0	1/1:2,15:17:42.13:507,42,0	0/0:8,1:9:11.74:0,12,102	0/0:10,0:9:23:0,23,185	1/1:3,29:32:90.23:1070,90,0	0/0:26,0:26:63.08:0,63,602	0/0:15,0:15:42.05:0,42,399	0/0:20,0:20:45.06:0,45,430	1/1:2,16:19:53.99:605,54,0	1/1:5,21:25:69.21:833,69,0	1/1:3,16:19:54.15:641,54,0	1/1:5,11:16:36.03:400,36,0	1/1:4,18:22:60.11:693,60,0	1/1:4,14:18:51.16:616,51,0	1/1:1,14:15:39.12:471,39,0	1/1:2,15:17:51.16:613,51,0	1/1:4,8:12:24.07:290,24,0	1/1:1,4:5:9.03:109,9,0	1/1:10,11:21:51.15:602,51,0	1/1:8,16:24:45.13:532,45,0	1/1:2,8:10:21.06:254,21,0	0/0:24,0:24:63.10:0,63,608	0/0:23,0:23:63.09:0,63,608	0/0:19,0:19:51.08:0,51,492	1/1:3,21:24:63.18:750,63,0	1/1:7,18:25:66.19:784,66,0	1/1:3,35:38:99:1182,102,0	1/1:3,6:9:17.82:217,18,0
chr10	60911719	.	TCAGGGGAA	T	24955.77	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=15.068;DP=552;FS=17.885;HRun=0;HaplotypeScore=175.6734;InbreedingCoeff=0.9694;MQ=71.49;MQ0=0;MQRankSum=-15.950;QD=63.34;ReadPosRankSum=5.198;VQSLOD=3.5687;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,16:24:35.68:983,36,0	1/1:3,15:18:42.10:1111,42,0	0/0:19,0:19:54.18:0,54,2099	0/0:15,0:15:42.14:0,42,1533	1/1:6,28:34:75.08:1779,75,0	0/0:20,0:20:57.18:0,57,2395	0/0:16,0:16:45.15:0,45,1905	0/0:33,0:33:90.27:0,90,3608	1/1:1,19:20:54.19:1525,54,0	1/1:5,28:33:81.28:2216,81,0	1/1:4,21:25:60.12:1553,60,0	1/1:1,16:17:42.14:1187,42,0	1/1:3,20:24:63.22:1778,63,0	1/1:1,15:16:36.08:952,36,0	1/1:2,24:26:63.22:1738,63,0	1/1:3,10:13:30.10:837,30,0	1/1:1,11:12:33.11:933,33,0	1/1:0,1:1:3.01:85,3,0	1/1:3,12:15:36.10:855,36,0	1/1:0,23:23:60.16:1631,60,0	1/1:1,7:8:19.82:451,20,0	0/0:20,0:20:51.16:0,51,2058	0/0:18,0:18:48.16:0,48,2073	0/0:17,0:17:51.18:0,51,2259	1/1:6,22:28:63.17:1628,63,0	1/1:2,18:20:51.16:1335,51,0	1/1:4,26:30:69.15:1786,69,0	1/1:0,7:7:21.07:593,21,0
chr10	60912152	.	TCACA	T	3941.32	PASS	AB=0.778;AC=39;AF=0.750;AN=52;BaseQRankSum=-1.930;DP=459;FS=2.543;HRun=0;HaplotypeScore=96.4270;InbreedingCoeff=0.2870;MQ=72.81;MQ0=12;MQRankSum=0.320;QD=11.80;ReadPosRankSum=1.646;VQSLOD=3.1765;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,6:19:27.07:410,27,0	1/1:6,2:8:9.03:136,9,0	./.	0/0:30,0:20:0.47:0,0,1	1/1:8,3:12:18.04:238,18,0	0/1:16,0:19:34.92:35,0,78	0/1:16,1:20:65.54:66,0,81	0/0:24,0:24:11.97:0,12,107	1/1:15,4:20:6.01:75,6,0	0/0:13,0:16:14.51:0,15,137	1/1:9,6:15:2.55:165,3,0	1/1:9,4:13:12.04:188,12,0	1/1:5,5:11:5.56:203,6,0	1/1:5,9:14:24.08:375,24,0	1/1:10,8:18:24.08:371,24,0	1/1:9,3:12:9.03:141,9,0	1/1:14,5:19:18.06:282,18,0	./.	1/1:17,2:20:9.02:122,9,0	1/1:8,3:11:18.06:266,18,0	1/1:9,2:11:6.02:94,6,0	0/1:7,2:15:14.71:15,0,123	0/1:15,2:23:71.06:71,0,79	0/0:13,0:17:16.98:0,17,138	0/1:9,2:12:28.57:135,0,29	1/1:13,2:16:12.03:154,12,0	1/1:9,6:15:24.07:355,24,0	1/1:6,1:7:3.01:47,3,0
chr10	60912203	.	CGTGT	C	2219.59	PASS	AB=0.843;AC=11;AF=0.196;AN=56;BaseQRankSum=5.238;DP=571;FS=4.354;HRun=0;HaplotypeScore=105.4845;InbreedingCoeff=0.6622;MQ=55.53;MQ0=35;MQRankSum=-2.434;QD=12.54;ReadPosRankSum=0.230;VQSLOD=2.9834;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:27:51.34:0,51,1077	0/0:6,0:6:12.04:0,12,292	0/0:75,0:6:3.58:0,4,76	0/1:65,0:6:31.35:39,0,31	0/0:18,0:18:32.80:0,33,627	1/1:6,16:22:33.09:553,33,0	1/1:4,13:18:32.84:494,33,0	0/0:18,0:18:36.53:0,37,760	0/0:8,0:8:12.02:0,12,247	0/0:15,0:15:42.11:0,42,896	0/0:17,0:17:36.08:0,36,826	0/0:14,0:17:44.34:0,44,835	0/0:19,0:20:53.86:0,54,1084	0/0:18,0:19:44.81:0,45,803	0/0:20,0:23:50.60:0,51,945	0/0:12,0:12:27.08:0,27,614	0/0:21,0:23:62.66:0,63,1354	0/0:6,0:6:12.04:0,12,297	0/1:17,1:18:11.50:11,0,713	0/0:11,0:13:29.89:0,30,642	0/0:21,0:21:48.15:0,48,1113	0/1:6,9:15:3.10:238,0,3	1/1:6,14:20:18.24:629,18,0	1/1:7,10:16:27.16:425,27,0	0/0:14,0:14:29.80:0,30,604	0/0:16,0:16:48.02:0,48,934	0/0:16,0:18:38.60:0,39,816	0/0:6,0:5:15.03:0,15,321
chr10	60913271	.	CACAAGTATT	C	20802.82	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=13.467;DP=447;FS=28.913;HRun=0;HaplotypeScore=141.6158;InbreedingCoeff=0.9645;MQ=86.24;MQ0=0;MQRankSum=-15.746;QD=69.57;ReadPosRankSum=3.594;VQSLOD=2.7490;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,10:11:21.07:630,21,0	1/1:0,8:8:21.07:651,21,0	0/0:17,0:17:50.77:0,51,2076	0/0:22,0:22:63.22:0,63,2480	1/1:4,17:21:42.14:1284,42,0	0/0:19,0:19:54.19:0,54,2361	0/0:9,0:9:21.07:0,21,946	0/0:33,0:33:93.31:0,93,4211	1/1:1,7:8:15.05:465,15,0	1/1:2,13:15:39.13:1210,39,0	1/1:3,19:21:48.16:1484,48,0	1/1:1,17:18:45.15:1395,45,0	1/1:4,9:13:21.07:630,21,0	1/1:0,13:13:33.11:1022,33,0	1/1:0,12:12:36.12:1116,36,0	1/1:1,18:19:39.13:1174,39,0	1/1:1,13:14:21.07:651,21,0	1/1:1,8:9:18.53:559,19,0	1/1:1,13:14:39.12:1141,39,0	1/1:5,20:25:51.17:1560,51,0	1/1:1,3:4:9.03:220,9,0	0/0:12,0:12:36.12:0,36,1706	0/0:30,0:30:90.27:0,90,4187	0/0:6,0:6:18.06:0,18,883	1/1:0,17:17:42.14:1302,42,0	1/1:1,23:23:69.24:2079,69,0	1/1:2,23:25:66.23:2045,66,0	1/1:0,7:7:6.02:186,6,0
chr10	60913647	.	A	ATATCT	39079.91	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=0.232;DP=630;FS=16.381;HRun=0;HaplotypeScore=143.7010;InbreedingCoeff=0.9010;MQ=67.14;MQ0=0;MQRankSum=-8.025;QD=65.24;ReadPosRankSum=3.255;VQSLOD=4.8217;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,14:17:36.06:1047,36,0	1/1:1,6:7:18.06:554,18,0	0/0:20,0:20:48.16:0,48,991	0/0:11,0:11:27.09:0,27,540	1/1:7,14:24:38.92:749,39,0	1/1:6,17:23:54.18:1502,54,0	1/1:11,9:21:45.08:1203,45,0	1/1:14,14:28:81.28:2472,81,0	1/1:5,17:26:60.07:1580,60,0	1/1:5,25:31:87.22:2480,87,0	1/1:3,20:24:51.17:1420,51,0	1/1:3,27:30:75.19:2208,75,0	1/1:8,20:29:75.15:2088,75,0	1/1:5,32:38:93.23:2381,93,0	1/1:6,21:29:78.06:2026,78,0	1/1:5,14:19:42.08:1235,42,0	1/1:5,7:12:29.34:728,29,0	1/1:6,6:12:21.07:617,21,0	1/1:8,10:18:54.19:1557,54,0	1/1:10,20:30:69.19:1883,69,0	1/1:5,3:9:11.73:213,12,0	1/1:3,15:18:51.02:1193,51,0	1/1:7,31:39:81.19:2313,81,0	1/1:4,6:10:6.01:131,6,0	1/1:5,27:35:81.28:2398,81,0	1/1:7,22:30:87.19:2481,87,0	1/1:1,29:32:81.21:2340,81,0	1/1:0,7:7:9.03:281,9,0
chr10	60914181	.	T	TA	11075.33	PASS	AB=0.573;AC=48;AF=0.857;AN=56;BaseQRankSum=-8.052;DP=571;FS=0.000;HRun=10;HaplotypeScore=54.9532;InbreedingCoeff=0.6298;MQ=80.80;MQ0=1;MQRankSum=-3.061;QD=22.11;ReadPosRankSum=3.625;VQSLOD=5.5136;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,20:23:20.47:423,20,0	1/1:1,8:9:24.06:256,24,0	0/0:25,0:22:25.29:0,25,217	0/0:14,0:11:20.92:0,21,153	1/1:4,24:29:53.28:730,53,0	1/1:2,17:19:36.05:372,36,0	1/1:3,10:13:5.42:257,5,0	0/0:31,0:31:59.85:0,60,488	1/1:5,15:20:45.11:478,45,0	1/1:8,19:27:10.28:546,10,0	1/1:3,28:31:61.69:770,62,0	1/1:3,10:13:5.39:251,5,0	0/1:4,9:14:22.35:179,0,22	1/1:2,13:17:41.83:405,42,0	1/1:3,24:27:62.99:654,63,0	1/1:2,16:18:26.48:487,26,0	1/1:6,23:29:32.50:551,33,0	1/1:0,12:12:30.08:320,30,0	1/1:5,11:17:35.90:351,36,0	1/1:6,27:33:34.72:720,35,0	1/1:2,12:14:27.95:288,28,0	1/1:2,17:20:29.28:489,29,0	1/1:3,16:19:42.11:448,42,0	0/1:2,6:9:9.61:113,0,10	1/1:4,16:22:26.15:452,26,0	1/1:5,25:31:56.37:780,56,0	1/1:6,17:23:45.05:466,45,0	1/1:1,10:12:4.59:289,5,0
chr10	60916455	.	AT	A	2501.23	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=10.669;DP=508;FS=2.022;HRun=6;HaplotypeScore=49.4270;InbreedingCoeff=0.9928;MQ=78.25;MQ0=0;MQRankSum=-1.262;QD=26.61;ReadPosRankSum=0.481;VQSLOD=3.7406;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:5:15.05:0,15,197	0/0:9,0:9:24.08:0,24,316	0/0:16,0:15:27.06:0,27,322	0/0:8,0:9:23.87:0,24,290	0/0:35,0:35:96.31:0,96,1263	1/1:1,27:28:78.20:838,78,0	1/1:0,11:11:33.08:355,33,0	0/0:25,0:25:57.18:0,57,737	0/0:9,0:9:24.08:0,24,316	0/0:20,0:20:54.18:0,54,711	0/0:24,0:24:63.20:0,63,828	0/0:14,0:14:42.11:0,42,524	0/0:19,0:19:57.19:0,57,750	0/0:17,0:17:51.17:0,51,671	0/0:15,0:15:33.11:0,33,434	0/0:18,0:18:54.16:0,54,696	0/0:15,0:15:42.12:0,42,537	0/0:20,0:20:60.20:0,60,789	0/0:19,0:19:48.16:0,48,631	0/0:37,0:37:99:0,102,1327	0/0:10,0:10:27.09:0,27,355	1/1:0,19:19:57.14:613,57,0	1/1:3,24:27:60.15:645,60,0	1/1:2,7:9:21.05:226,21,0	0/0:23,0:23:69.22:0,69,908	0/0:21,0:21:60.19:0,60,787	0/0:24,0:24:63.20:0,63,828	0/0:10,0:10:24.08:0,24,316
chr10	60917457	.	A	ATT	18241.01	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-6.513;DP=608;FS=0.564;HRun=7;HaplotypeScore=68.9488;InbreedingCoeff=0.9946;MQ=79.87;MQ0=2;MQRankSum=-7.083;QD=33.53;ReadPosRankSum=6.477;VQSLOD=4.4562;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,23:27:69.24:1132,69,0	1/1:0,10:10:30.06:452,30,0	0/0:15,0:15:35.69:0,36,390	0/0:19,0:19:31.18:0,31,495	1/1:2,32:34:93.28:1493,93,0	1/1:2,0:16:32.44:114,32,0	1/1:3,0:19:37.43:132,37,0	0/0:30,0:30:69.14:0,69,761	1/1:3,9:12:21.07:344,21,0	1/1:3,28:31:81.28:1328,81,0	1/1:1,22:23:66.14:1024,66,0	1/1:0,16:15:45.15:739,45,0	1/1:1,13:14:42.14:688,42,0	1/1:1,19:22:39.13:640,39,0	1/1:2,23:25:60.20:984,60,0	1/1:1,16:17:48.16:788,48,0	1/1:2,25:26:60.20:985,60,0	1/1:1,11:12:33.11:542,33,0	1/1:6,22:28:66.20:1051,66,0	1/1:3,32:35:93.11:1380,93,0	1/1:2,11:13:18.06:295,18,0	1/1:2,0:24:52.40:185,52,0	1/1:1,0:23:49.91:176,50,0	1/1:3,0:19:34.93:123,35,0	1/1:2,22:24:48.16:788,48,0	1/1:7,32:40:99:1579,99,0	1/1:2,20:22:51.17:838,51,0	1/1:2,9:11:27.09:443,27,0
chr10	60917933	.	CA	C	17110.06	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=2.901;DP=688;FS=3.044;HRun=6;HaplotypeScore=68.3594;InbreedingCoeff=0.9404;MQ=83.70;MQ0=0;MQRankSum=-6.942;QD=27.69;ReadPosRankSum=7.559;VQSLOD=4.4040;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:3,50:53:99:1354,126,0	1/1:1,10:11:30.08:322,30,0	0/0:23,0:23:60.16:0,60,754	0/0:16,0:16:36.06:0,36,429	1/1:0,26:26:72.18:773,72,0	1/1:0,25:25:75.19:806,75,0	1/1:2,18:20:48.12:516,48,0	0/0:31,0:31:81.26:0,81,1053	1/1:2,25:27:60.15:644,60,0	1/1:2,26:28:78.16:821,78,0	1/1:3,19:22:48.11:515,48,0	1/1:1,22:23:60.15:645,60,0	1/1:0,24:24:69.17:741,69,0	1/1:1,14:15:39.10:419,39,0	1/1:2,24:26:66.16:709,66,0	1/1:2,27:29:78.19:838,78,0	1/1:2,19:21:51.13:548,51,0	1/1:1,16:17:42.07:440,42,0	1/1:1,20:21:51.13:548,51,0	1/1:1,25:26:75.19:804,75,0	1/1:0,38:38:99:1193,111,0	1/1:0,33:33:78.19:838,78,0	1/1:3,21:24:54.14:580,54,0	1/1:4,40:44:99:1257,117,0	1/1:3,16:19:48.12:516,48,0	1/1:2,17:19:51.11:540,51,0	1/1:1,24:25:66.17:709,66,0	1/1:1,1:2:3.01:32,3,0
chr10	60918301	.	GA	G	10727.10	PASS	AB=1.000;AC=41;AF=0.732;AN=56;BaseQRankSum=-6.073;DP=588;FS=7.591;HRun=7;HaplotypeScore=73.8433;InbreedingCoeff=0.9372;MQ=80.79;MQ0=0;MQRankSum=-3.671;QD=25.42;ReadPosRankSum=3.652;VQSLOD=5.3901;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,20:25:51.11:520,51,0	1/1:0,6:6:18.04:184,18,0	0/0:18,0:18:45.13:0,45,550	0/0:18,0:18:42.13:0,42,511	1/1:3,29:32:84.14:843,84,0	0/0:23,0:23:61.37:0,61,361	0/1:8,0:8:3.28:3,0,91	0/0:31,0:31:78.24:0,78,971	1/1:5,21:26:60.13:612,60,0	1/1:2,25:27:75.14:753,75,0	1/1:2,20:22:57.12:580,57,0	1/1:1,13:14:36.08:367,36,0	1/1:1,14:15:42.09:428,42,0	1/1:1,16:17:45.10:459,45,0	1/1:2,13:15:36.08:367,36,0	1/1:1,9:10:27.06:275,27,0	1/1:3,15:18:39.09:398,39,0	1/1:3,18:21:51.11:519,51,0	1/1:3,23:26:69.14:697,69,0	1/1:4,35:39:99:1059,105,0	1/1:1,12:13:33.07:337,33,0	0/0:30,0:30:77.59:0,78,455	0/0:31,0:31:42.85:0,43,462	0/0:15,0:15:39.78:0,40,241	1/1:3,20:23:54.12:551,54,0	1/1:1,22:23:66.15:673,66,0	1/1:2,25:27:69.16:704,69,0	1/1:0,15:15:39.09:398,39,0
chr10	60919593	.	TGTGTGTGTGA	T	1555.79	PASS	AB=1.000;AC=22;AF=0.393;AN=56;BaseQRankSum=1.544;DP=555;FS=23.486;HRun=0;HaplotypeScore=142.5234;InbreedingCoeff=-0.0055;MQ=57.48;MQ0=20;MQRankSum=-1.090;QD=4.88;ReadPosRankSum=2.336;VQSLOD=0.4867;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,22:28:11.77:231,12,0	0/1:13,0:13:39.25:127,0,39	0/0:25,0:14:29.42:0,29,376	0/0:32,0:16:27.27:0,27,304	0/1:19,0:18:0:0,0,0	0/1:17,0:17:77.70:78,0,551	0/1:21,0:21:99:111,0,262	0/0:18,0:17:38.52:0,39,398	0/1:10,0:10:81.06:81,0,120	0/1:20,0:19:2.85:201,0,3	1/1:15,0:15:0.28:1,0,0	1/1:12,0:11:0.89:2,1,0	0/0:12,0:12:2.39:0,2,48	1/1:15,0:14:7:92,7,0	0/0:21,0:21:3.65:0,4,45	1/1:13,0:12:5.05:25,5,0	0/1:19,0:19:67.77:68,0,105	0/1:17,0:15:70.87:71,0,424	0/1:16,0:16:9.41:246,0,9	0/1:23,0:23:31.64:34,0,32	0/1:36,0:33:99:160,0,103	0/0:21,0:20:11.86:0,12,137	0/0:20,0:19:8.71:0,9,198	0/0:22,0:22:21.53:0,22,689	0/0:23,0:23:2.68:0,3,11	0/1:22,0:21:99:185,0,430	0/0:29,0:29:9.08:0,9,85	0/0:13,0:13:21.41:0,21,313
chr10	60919595	.	TGTGTGTGA	T	2359.70	PASS	AB=1.000;AC=33;AF=0.589;AN=56;BaseQRankSum=2.061;DP=542;FS=30.713;HRun=0;HaplotypeScore=127.9407;InbreedingCoeff=0.2639;MQ=58.37;MQ0=19;MQRankSum=-0.045;QD=6.02;ReadPosRankSum=3.897;VQSLOD=0.6623;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:28:11.76:164,12,0	0/1:13,0:13:15.69:141,0,16	0/0:25,0:14:28.64:0,29,375	0/0:31,0:17:31.38:0,31,375	0/1:17,0:16:0:0,0,0	0/1:17,0:17:74.84:75,0,408	0/1:21,0:21:99:156,0,172	0/0:19,0:18:41.83:0,42,375	0/1:10,0:10:35.46:123,0,35	1/1:20,0:19:20.01:283,20,0	1/1:14,0:14:0.35:0,0,0	1/1:11,1:11:3:28,3,0	0/1:12,0:12:17.74:22,0,18	1/1:14,1:14:12.03:172,12,0	1/1:21,0:21:6:56,6,0	1/1:12,0:11:12.48:110,12,0	1/1:16,0:17:6.91:163,7,0	0/1:17,0:15:92.52:93,0,278	1/1:18,0:18:25.97:326,26,0	1/1:21,1:22:9:139,9,0	1/1:33,0:30:13.07:231,13,0	0/0:21,0:20:11.99:0,12,118	0/0:19,0:18:6.49:0,6,141	0/0:22,0:22:21.01:0,21,531	1/1:21,1:22:2.84:14,3,0	0/1:22,0:21:99:198,0,185	0/1:27,0:27:4.67:44,0,5	0/0:13,0:13:6.87:0,7,193
chr10	60919597	.	TGTGTGA	T	3785.75	PASS	AB=0.791;AC=37;AF=0.661;AN=56;BaseQRankSum=2.643;DP=536;FS=18.078;HRun=0;HaplotypeScore=113.1903;InbreedingCoeff=0.4170;MQ=60.26;MQ0=19;MQRankSum=-0.592;QD=9.66;ReadPosRankSum=4.650;VQSLOD=1.0748;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:27:11.76:137,12,0	1/1:12,0:12:26.66:258,27,0	0/0:26,0:15:31.50:0,31,404	0/0:35,0:20:14:0,14,386	0/1:1,16:16:0:0,0,0	0/1:15,0:15:99:110,0,202	0/1:20,0:20:47.43:162,0,47	0/0:19,0:18:44.82:0,45,389	1/1:10,0:10:24.63:183,25,0	1/1:3,15:17:38.02:368,38,0	0/1:0,14:14:0:0,0,0	1/1:2,10:11:3.01:72,3,0	0/1:1,11:12:19.37:66,0,19	1/1:3,12:14:11.93:214,12,0	1/1:0,20:20:6.02:145,6,0	1/1:2,10:11:12.03:243,12,0	1/1:15,0:15:27.70:281,28,0	0/1:18,0:16:99:132,0,151	1/1:19,0:19:46.55:399,47,0	1/1:2,20:22:6.02:126,6,0	1/1:29,0:26:38.93:317,39,0	0/0:22,0:21:5.85:0,6,38	0/0:19,0:18:5.73:0,6,98	0/0:23,0:23:16.77:0,17,372	1/1:1,21:22:3.01:58,3,0	1/1:23,0:22:20.39:345,20,0	1/1:2,23:25:7.63:156,8,0	0/1:13,0:13:12.42:12,0,62
chr10	60919599	.	TGTGA	T	3626.16	PASS	AB=0.944;AC=38;AF=0.679;AN=56;BaseQRankSum=2.450;DP=531;FS=11.025;HRun=0;HaplotypeScore=104.9290;InbreedingCoeff=0.4436;MQ=62.81;MQ0=17;MQRankSum=-1.678;QD=9.32;ReadPosRankSum=4.753;VQSLOD=1.6250;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:27:11.76:109,12,0	1/1:11,0:11:26.59:201,27,0	0/0:27,0:16:34.41:0,34,422	0/0:37,0:22:13.13:0,13,402	0/1:17,0:16:0:0,0,0	0/1:15,0:15:78.83:112,0,79	0/1:21,0:21:34.91:199,0,35	0/0:19,0:18:46.04:0,46,407	1/1:13,0:13:32.98:327,33,0	1/1:17,0:17:35.44:314,35,0	0/1:14,0:14:0.02:0,0,0	1/1:12,0:11:3.01:40,3,0	1/1:12,0:12:2.47:40,2,0	1/1:15,0:14:12.02:143,12,0	1/1:20,0:20:6.02:80,6,0	1/1:12,0:11:9.97:121,10,0	1/1:15,0:15:25.25:207,25,0	0/1:17,0:15:19.92:141,0,20	1/1:18,0:18:50.87:430,51,0	1/1:21,0:21:6.02:80,6,0	1/1:29,0:26:38.93:317,39,0	0/0:19,0:19:2.97:0,3,21	0/0:18,0:17:5.57:0,6,63	0/0:22,0:22:17.34:0,17,240	1/1:22,0:22:3:26,3,0	1/1:22,0:21:62.50:536,63,0	1/1:24,1:25:8.32:137,8,0	0/1:6,6:12:12.55:65,0,13
chr10	60919601	.	TGA	T	3757.78	PASS	AB=1.000;AC=42;AF=0.750;AN=56;BaseQRankSum=4.448;DP=525;FS=1.299;HRun=0;HaplotypeScore=95.2569;InbreedingCoeff=0.6572;MQ=65.91;MQ0=16;MQRankSum=-3.482;QD=9.79;ReadPosRankSum=5.025;VQSLOD=3.2853;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:26:11.74:81,12,0	1/1:11,0:11:26.64:207,27,0	0/0:29,0:18:40.29:0,40,465	0/0:37,0:23:15.92:0,16,424	0/1:17,0:16:0:0,0,0	1/1:12,1:13:10.66:194,11,0	1/1:19,1:20:21.46:293,21,0	0/0:21,0:20:48.02:0,48,452	1/1:14,0:14:38.73:312,39,0	1/1:17,0:17:35.94:301,36,0	0/0:14,0:14:0.47:0,0,1	1/1:12,0:11:3:26,3,0	1/1:11,0:11:2.99:26,3,0	1/1:15,0:14:11.95:96,12,0	1/1:20,0:20:6:53,6,0	1/1:12,0:11:8.53:77,9,0	1/1:13,0:13:23.88:185,24,0	1/1:13,2:13:15.76:278,16,0	1/1:19,0:19:53.92:462,54,0	1/1:21,0:21:6:52,6,0	1/1:26,0:24:38.93:318,39,0	0/1:19,0:19:0:0,0,0	0/0:18,0:17:2.85:0,3,18	0/0:20,0:21:2.38:0,2,77	1/1:22,0:22:3:27,3,0	1/1:22,0:21:62.56:537,63,0	1/1:25,0:25:9:78,9,0	1/1:11,1:12:14.97:155,15,0
chr10	60919603	.	A	AGT	1464.65	PASS	AB=0.946;AC=25;AF=0.446;AN=56;BaseQRankSum=-1.158;DP=523;FS=0.674;HRun=0;HaplotypeScore=105.0051;InbreedingCoeff=0.3268;MQ=66.38;MQ0=16;MQRankSum=-0.353;QD=5.02;ReadPosRankSum=-0.686;VQSLOD=2.7818;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:26:7.31:0,7,28	0/1:10,0:10:2.03:32,0,2	0/0:29,0:18:42.38:0,42,733	0/0:38,0:23:49.73:0,50,688	0/1:17,0:16:0:0,0,0	1/1:13,0:13:30.10:499,30,0	1/1:19,0:19:11.01:565,11,0	0/0:22,0:21:48.12:0,48,672	0/1:14,0:14:15.20:15,0,16	0/1:16,0:16:3.59:4,0,6	0/0:14,0:14:0.35:0,0,1	0/0:13,0:12:2.68:0,3,11	0/0:11,0:11:2.53:0,3,11	0/1:15,0:14:7.84:8,0,24	0/0:20,0:20:5.36:0,5,23	0/0:13,0:12:9.04:0,9,36	1/1:13,0:13:2.64:24,3,0	0/1:16,0:14:4.60:5,0,53	1/1:19,0:19:17.07:101,17,0	0/0:21,0:21:5.36:0,5,23	1/1:23,0:22:1.06:3,1,0	0/1:1,17:19:0:0,0,0	1/1:1,15:16:2.77:58,3,0	1/1:3,18:22:17.66:244,18,0	1/1:22,0:22:3:27,3,0	0/0:22,0:21:4.35:0,4,18	0/1:26,0:26:0.79:1,0,25	0/1:10,0:10:9.76:35,0,10
chr10	60919858	.	G	GTTTT	14663.08	PASS	AB=1.000;AC=41;AF=0.732;AN=56;BaseQRankSum=-3.015;DP=458;FS=3.423;HRun=10;HaplotypeScore=99.1805;InbreedingCoeff=0.8508;MQ=62.09;MQ0=0;MQRankSum=-6.228;QD=41.78;ReadPosRankSum=-3.548;VQSLOD=3.6068;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,0:19:48.13:588,48,0	1/1:7,5:14:30.10:617,30,0	0/0:7,0:7:11.99:0,12,167	0/1:11,0:11:47.51:48,0,166	1/1:10,1:24:60.11:798,60,0	0/0:2,0:16:6.97:0,7,105	0/0:2,0:10:6.16:0,6,16	0/0:31,0:31:78.13:0,78,1102	1/1:8,2:18:42.12:585,42,0	1/1:14,6:20:33.10:702,33,0	1/1:3,9:16:45.15:896,45,0	1/1:3,6:11:27.01:548,27,0	1/1:6,5:12:33.11:690,33,0	1/1:6,6:12:27.09:602,27,0	1/1:6,12:20:51.17:1064,51,0	1/1:6,8:14:36.12:807,36,0	1/1:9,13:23:65.02:1312,65,0	1/1:5,0:10:24.06:322,24,0	1/1:8,4:13:33:575,33,0	1/1:15,13:28:66.19:1388,66,0	1/1:7,5:13:27.08:539,27,0	0/0:5,0:15:12.68:0,13,38	0/0:2,0:15:19.70:0,20,119	0/0:4,0:13:9.51:0,10,25	1/1:4,10:16:43.03:872,43,0	1/1:14,0:29:66.08:826,66,0	1/1:5,5:11:26.87:537,27,0	1/1:9,0:15:32.88:349,33,0
chr10	60919933	.	C	CT	13536.88	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-4.804;DP=476;FS=2.230;HRun=6;HaplotypeScore=54.2466;InbreedingCoeff=0.9553;MQ=66.58;MQ0=1;MQRankSum=-0.510;QD=31.55;ReadPosRankSum=4.950;VQSLOD=5.0685;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,20:20:57.14:695,57,0	1/1:1,13:14:39.12:491,39,0	0/0:10,0:9:14.21:0,14,177	0/0:6,0:6:8.89:0,9,90	1/1:3,29:32:84.27:1056,84,0	1/1:6,10:16:45.04:505,45,0	1/1:1,6:7:15.05:189,15,0	0/0:31,0:31:78.17:0,78,796	1/1:3,17:20:45.14:566,45,0	1/1:5,25:30:75.22:931,75,0	1/1:1,20:21:57.14:699,57,0	1/1:1,13:14:33.11:415,33,0	1/1:2,12:14:36.12:453,36,0	1/1:2,16:18:42.13:523,42,0	1/1:3,16:19:51.16:641,51,0	1/1:2,11:13:33.11:415,33,0	1/1:4,20:24:57.18:717,57,0	1/1:1,5:6:15.05:189,15,0	1/1:3,15:18:42.13:528,42,0	1/1:1,23:24:66.21:830,66,0	1/1:1,14:15:39.12:486,39,0	1/1:0,7:7:21.07:264,21,0	1/1:3,6:9:18.06:226,18,0	1/1:0,12:12:33.11:414,33,0	1/1:1,16:17:45.14:562,45,0	1/1:6,19:25:57.12:685,57,0	1/1:2,13:15:36.12:453,36,0	1/1:1,17:17:48.15:604,48,0
chr10	60923400	.	AAT	A	8077.34	PASS	AC=38;AF=0.792;AN=48;BaseQRankSum=9.746;DP=473;FS=0.591;HRun=0;HaplotypeScore=66.0849;InbreedingCoeff=0.9320;MQ=33.54;MQ0=71;MQRankSum=-1.340;QD=24.93;ReadPosRankSum=3.171;VQSLOD=5.5982;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,19:16:36.12:550,36,0	1/1:1,9:9:15.05:229,15,0	./.	./.	1/1:0,24:24:48.16:733,48,0	0/0:29,0:18:48.16:0,48,925	0/0:11,0:7:18.06:0,18,342	./.	1/1:0,16:11:15.05:229,15,0	1/1:1,15:15:33.11:501,33,0	1/1:0,13:12:12.04:183,12,0	1/1:0,14:12:21.07:321,21,0	1/1:0,18:16:27.09:413,27,0	1/1:1,13:9:18.06:274,18,0	1/1:0,16:13:27.09:412,27,0	1/1:0,12:9:21.07:321,21,0	1/1:0,17:14:27.09:413,27,0	1/1:0,7:4:3.01:46,3,0	./.	1/1:2,17:17:42.14:642,42,0	1/1:3,19:18:48.16:734,48,0	0/0:19,0:15:33.11:0,33,636	0/0:20,0:16:27.06:0,27,520	0/0:20,0:14:24.08:0,24,442	1/1:0,17:12:18.06:275,18,0	1/1:1,36:30:72.23:1081,72,0	1/1:4,15:17:33.11:490,33,0	1/1:2,8:10:15.05:230,15,0
chr10	60931332	.	AGT	A	16397.46	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=8.979;DP=514;FS=2.414;HRun=0;HaplotypeScore=120.1572;InbreedingCoeff=0.9957;MQ=71.65;MQ0=0;MQRankSum=-4.682;QD=36.28;ReadPosRankSum=7.736;VQSLOD=6.1036;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,18:22:51.17:731,51,0	1/1:0,9:9:27.09:380,27,0	0/0:11,0:11:27.09:0,27,465	0/0:13,0:13:36.12:0,36,649	1/1:6,29:35:81.27:1153,81,0	1/1:1,19:20:51.13:706,51,0	1/1:3,15:18:42.14:602,42,0	0/0:38,0:38:99:0,111,1997	1/1:1,25:26:75.22:1052,75,0	1/1:3,18:21:54.18:773,54,0	1/1:1,31:31:81.27:1152,81,0	1/1:1,12:13:36.12:516,36,0	1/1:1,19:20:57.19:817,57,0	1/1:2,18:19:45.15:638,45,0	1/1:1,14:15:39.13:559,39,0	1/1:0,12:12:33.08:451,33,0	1/1:2,10:12:24.08:339,24,0	1/1:2,6:8:21.07:301,21,0	1/1:0,9:9:27.09:387,27,0	1/1:0,17:16:48.16:681,48,0	1/1:1,13:14:39.13:558,39,0	1/1:1,28:29:75.25:1067,75,0	1/1:2,21:23:54.18:774,54,0	1/1:1,11:12:27.09:387,27,0	1/1:0,15:15:42.14:601,42,0	1/1:2,21:23:63.19:883,63,0	1/1:2,13:15:36.12:516,36,0	1/1:0,11:11:27.09:376,27,0
chr10	60933296	.	AG	A	6612.41	PASS	AC=50;AF=1.000;AN=50;DP=342;FS=0.000;HRun=2;HaplotypeScore=77.6681;InbreedingCoeff=-0.0247;MQ=31.63;MQ0=1;QD=19.56;VQSLOD=4.7371;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,11:9:15.05:194,15,0	1/1:2,9:9:24.03:280,24,0	./.	./.	1/1:2,9:8:12.04:155,12,0	1/1:0,9:6:15.05:194,15,0	1/1:0,2:1:3.01:39,3,0	1/1:3,9:9:15.05:194,15,0	1/1:0,18:15:21.07:272,21,0	1/1:1,15:7:21.07:272,21,0	1/1:0,22:15:20.98:234,21,0	1/1:3,8:10:24.08:310,24,0	1/1:0,11:9:18.06:232,18,0	1/1:0,10:9:18.06:233,18,0	1/1:2,16:16:42.13:531,42,0	1/1:1,9:9:27.09:350,27,0	1/1:2,8:9:9.03:116,9,0	1/1:1,4:3:6.02:78,6,0	1/1:0,9:8:24.08:311,24,0	1/1:2,18:17:30.06:370,30,0	./.	1/1:2,18:16:27.03:329,27,0	1/1:2,18:17:27.09:349,27,0	1/1:1,12:10:18.06:233,18,0	1/1:1,18:14:24.08:310,24,0	1/1:2,12:11:33.09:404,33,0	1/1:3,29:25:45.15:582,45,0	1/1:0,4:4:3.01:39,3,0
chr10	60934951	.	A	AC	7336.79	PASS	AB=0.703;AC=36;AF=0.643;AN=56;BaseQRankSum=-3.627;DP=463;FS=38.359;HRun=0;HaplotypeScore=47.8120;InbreedingCoeff=-0.1400;MQ=36.52;MQ0=47;MQRankSum=-8.451;QD=19.72;ReadPosRankSum=-0.641;VQSLOD=2.8673;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:15,1:13:18.36:18,0,154	0/1:3,5:8:4.20:176,0,4	0/0:20,0:8:24.08:0,24,336	0/0:33,0:17:43.95:0,44,569	0/1:9,6:12:19.57:156,0,20	1/1:6,15:20:5.66:580,6,0	0/1:6,6:10:4.71:126,0,5	0/0:38,0:29:60.20:0,60,839	0/1:6,5:9:52.88:211,0,53	1/1:2,10:12:27.09:430,27,0	0/1:7,6:11:16.39:262,0,16	0/1:7,9:13:6.38:395,0,6	0/1:2,7:9:16.99:235,0,17	1/1:5,11:15:30.10:475,30,0	1/1:4,18:21:21.71:817,22,0	1/1:6,10:12:4.83:304,5,0	0/1:11,5:10:22.47:128,0,22	1/1:1,1:1:3.01:48,3,0	1/1:5,7:9:4.76:260,5,0	0/1:9,10:18:28.82:200,0,29	0/1:14,2:14:49.73:50,0,60	0/1:5,5:8:21.43:173,0,21	0/1:10,7:14:61.80:217,0,62	1/1:5,3:5:5.93:64,6,0	0/1:8,9:16:21.70:363,0,22	1/1:10,10:14:3.25:349,3,0	1/1:11,25:31:49.98:1029,50,0	1/1:3,8:11:6.69:272,7,0
chr10	60937904	.	TGG	T	12472.45	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-6.049;DP=551;FS=0.631;HRun=9;HaplotypeScore=87.4344;InbreedingCoeff=0.9642;MQ=63.36;MQ0=1;MQRankSum=0.565;QD=25.15;ReadPosRankSum=7.694;VQSLOD=4.0512;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,9:11:26.82:289,27,0	1/1:2,12:14:27.08:315,27,0	0/0:21,0:17:9.99:0,10,517	0/0:15,0:15:36:0,36,421	1/1:0,30:30:87.25:1003,87,0	1/1:2,0:20:38.32:222,38,0	1/1:0,0:11:21.92:105,22,0	0/0:4,0:18:30.70:0,31,106	1/1:1,10:11:24.06:280,24,0	1/1:1,24:25:69.20:802,69,0	1/1:2,25:27:75.21:868,75,0	1/1:1,13:14:27.07:315,27,0	1/1:1,20:21:54.16:629,54,0	1/1:1,11:12:27.08:315,27,0	1/1:1,20:21:45.13:524,45,0	1/1:2,10:12:24.07:280,24,0	1/1:3,21:24:51.14:593,51,0	1/1:3,6:9:21.03:230,21,0	1/1:1,19:19:48.14:559,48,0	1/1:2,33:35:99:1152,99,0	1/1:2,21:23:60.17:699,60,0	1/1:2,0:25:62.23:304,62,0	1/1:3,0:31:66.99:324,67,0	1/1:2,0:8:11.27:54,11,0	1/1:2,25:27:54.16:629,54,0	1/1:2,21:23:63.16:722,63,0	1/1:1,21:22:51.15:594,51,0	1/1:0,20:20:57.17:664,57,0
chr10	60938759	.	A	AT	1903.04	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=6.386;DP=446;FS=1.780;HRun=6;HaplotypeScore=48.3089;InbreedingCoeff=0.9678;MQ=78.56;MQ0=0;MQRankSum=-1.593;QD=30.21;ReadPosRankSum=0.829;VQSLOD=4.1374;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:36.08:0,36,367	0/0:9,0:9:24.02:0,24,236	0/0:9,0:9:24.04:0,24,239	0/0:16,0:16:23.55:0,24,302	0/0:23,0:23:66.14:0,66,667	1/1:1,17:18:48.15:604,48,0	1/1:0,9:9:21.07:264,21,0	0/0:28,0:28:78.16:0,78,785	0/0:21,0:21:57.13:0,57,581	0/0:19,0:19:48.10:0,48,486	0/0:18,0:18:45.10:0,45,459	0/0:11,0:11:30.05:0,30,298	0/0:17,0:17:45.10:0,45,458	0/0:15,0:15:36.08:0,36,367	0/0:16,0:16:42.07:0,42,421	0/0:16,0:16:45.10:0,45,459	0/0:18,0:18:36.07:0,36,367	0/0:3,0:3:9.02:0,9,92	0/0:13,0:13:39.09:0,39,398	0/0:35,0:35:96.21:0,96,979	0/0:6,0:6:12.03:0,12,122	1/1:2,12:14:36.12:453,36,0	1/1:0,17:17:48.15:604,48,0	1/1:0,5:5:12.04:151,12,0	0/0:17,0:17:48.10:0,48,489	0/0:22,0:22:60.13:0,60,611	0/0:32,0:31:87.14:0,87,870	0/0:6,0:6:17.98:0,18,165
chr10	60938896	.	GAGAGAAGAGAAGAGA	G	9561.47	PASS	AB=0.833;AC=40;AF=0.714;AN=56;BaseQRankSum=3.448;DP=580;FS=14.067;HRun=0;HaplotypeScore=202.6593;InbreedingCoeff=0.6916;MQ=59.42;MQ0=10;MQRankSum=-3.070;QD=24.02;ReadPosRankSum=1.391;VQSLOD=2.8129;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:9,10:19:8.80:583,9,0	1/1:3,5:8:3.97:163,4,0	0/0:46,0:20:6.49:0,6,79	0/1:58,0:17:0:0,0,0	1/1:17,17:34:27.09:501,27,0	0/0:16,0:26:39.13:0,39,2031	0/0:18,0:18:21.07:0,21,740	0/0:28,0:27:30.57:0,31,889	1/1:7,11:18:15.05:620,15,0	1/1:7,8:15:24.01:660,24,0	1/1:14,15:29:36.12:931,36,0	1/1:4,7:11:15.05:620,15,0	1/1:7,8:15:9.03:372,9,0	1/1:4,12:16:21.07:844,21,0	1/1:6,7:13:6.02:248,6,0	0/1:9,0:18:11.09:11,0,38	1/1:5,4:9:3.01:124,3,0	1/1:8,0:7:2.96:111,3,0	1/1:11,5:16:14.92:439,15,0	1/1:8,12:20:27.09:775,27,0	1/1:12,0:12:3.01:53,3,0	0/0:17,0:26:21.06:0,21,862	0/0:10,0:19:17.56:0,18,615	0/0:9,0:18:12.04:0,12,527	1/1:7,5:12:6.02:237,6,0	1/1:10,12:22:33.11:990,33,0	1/1:16,16:31:27.09:1032,27,0	1/1:8,5:13:6.02:248,6,0
chr10	60939243	.	CT	C	12332.52	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=4.390;DP=604;FS=4.418;HRun=9;HaplotypeScore=67.3173;InbreedingCoeff=0.9853;MQ=66.06;MQ0=0;MQRankSum=-1.538;QD=22.55;ReadPosRankSum=7.037;VQSLOD=4.8870;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:0,18:18:45.02:411,45,0	1/1:2,6:8:18.01:165,18,0	0/0:20,0:17:39.11:0,39,445	0/0:11,0:11:29.30:0,29,315	1/1:2,20:22:48.01:439,48,0	1/1:1,20:21:25.42:487,25,0	1/1:2,4:6:12:110,12,0	0/0:26,0:26:69.20:0,69,788	1/1:1,18:19:51.03:467,51,0	1/1:6,27:33:78.02:714,78,0	1/1:4,27:31:49.52:706,50,0	1/1:1,16:17:42.02:384,42,0	1/1:0,26:26:78.04:714,78,0	1/1:1,15:16:45.02:412,45,0	1/1:0,19:19:54.03:494,54,0	1/1:4,16:20:48.02:439,48,0	1/1:2,18:20:48.02:439,48,0	1/1:1,18:19:42.02:384,42,0	1/1:5,18:23:54.02:491,54,0	1/1:4,36:40:96.03:877,96,0	1/1:1,20:21:51.03:467,51,0	1/1:2,24:26:57.01:522,57,0	1/1:3,17:20:51.02:467,51,0	1/1:4,15:19:42.02:384,42,0	1/1:4,23:27:69.03:631,69,0	1/1:5,19:24:51.01:466,51,0	1/1:1,32:33:84.05:769,84,0	1/1:0,19:19:54.03:494,54,0
chr10	60939390	.	TG	T	15622.81	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=5.263;DP=656;FS=1.005;HRun=3;HaplotypeScore=67.7072;InbreedingCoeff=0.9990;MQ=62.43;MQ0=0;MQRankSum=-4.451;QD=34.19;ReadPosRankSum=5.490;VQSLOD=5.1069;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,24:26:21.59:733,22,0	1/1:1,10:11:27.08:335,27,0	0/0:33,0:28:81.26:0,81,1126	0/0:18,0:18:51.16:0,51,698	1/1:0,39:39:99:1413,114,0	0/0:17,0:17:51.15:0,51,714	0/0:17,0:17:51.17:0,51,734	0/0:37,0:37:99:0,105,1496	1/1:1,19:20:57.18:707,57,0	1/1:0,20:20:60.19:743,60,0	1/1:1,25:26:75.24:930,75,0	1/1:1,19:20:57.18:707,57,0	1/1:3,23:26:72.23:893,72,0	1/1:0,23:23:66.21:818,66,0	1/1:0,20:20:54.17:670,54,0	1/1:1,16:17:45.14:558,45,0	1/1:1,13:14:36.11:446,36,0	1/1:0,13:13:36.11:446,36,0	1/1:0,28:27:81.25:1004,81,0	1/1:0,36:36:99:1265,102,0	1/1:3,26:29:78.24:967,78,0	0/0:25,0:25:75.25:0,75,1079	0/0:29,0:28:81.26:0,81,1147	0/0:23,0:23:66.21:0,66,929	1/1:0,23:23:63.20:781,63,0	1/1:2,26:28:78.24:967,78,0	1/1:0,18:18:54.17:670,54,0	1/1:1,19:20:28.16:572,28,0
chr10	60940564	.	TCA	T	12162.47	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=9.898;DP=512;FS=1.327;HRun=0;HaplotypeScore=138.2934;InbreedingCoeff=0.9707;MQ=63.76;MQ0=1;MQRankSum=-7.238;QD=32.26;ReadPosRankSum=4.916;VQSLOD=7.0012;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,17:21:30.10:386,30,0	1/1:1,9:10:27.09:347,27,0	0/0:20,0:18:26.68:0,27,398	0/0:8,0:6:15.01:0,15,222	1/1:4,30:34:81.22:1038,81,0	0/0:16,0:16:42.14:0,42,698	0/0:9,0:9:27.09:0,27,450	0/0:37,0:37:93.31:0,93,1522	1/1:3,16:19:48.16:618,48,0	1/1:2,24:26:75.24:965,75,0	1/1:5,18:23:57.17:716,57,0	1/1:1,14:15:39.13:502,39,0	1/1:2,13:15:42.11:512,42,0	1/1:1,15:16:48.14:604,48,0	1/1:3,14:17:45.15:579,45,0	1/1:4,18:22:9.62:680,10,0	1/1:2,6:8:12.04:153,12,0	1/1:2,6:8:18.06:228,18,0	1/1:1,11:12:33.11:425,33,0	1/1:4,40:44:99:1582,123,0	1/1:1,11:12:21.07:271,21,0	0/0:19,0:19:48.16:0,48,805	0/0:18,0:18:42.14:0,42,705	0/0:8,0:8:21.07:0,21,354	1/1:1,24:25:72.23:926,72,0	1/1:4,15:19:51.16:644,51,0	1/1:5,21:27:69.21:872,69,0	1/1:0,4:4:9.03:116,9,0
chr10	60941075	.	T	TC	20460.29	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=1.856;DP=512;FS=17.728;HRun=1;HaplotypeScore=106.4021;InbreedingCoeff=0.9263;MQ=56.74;MQ0=0;MQRankSum=-4.212;QD=40.44;ReadPosRankSum=2.897;VQSLOD=3.0164;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,34:34:99:1451,99,0	1/1:1,8:9:27.09:400,27,0	0/0:3,0:3:9.03:0,9,117	0/0:3,0:3:9.03:0,9,117	1/1:0,24:24:69.23:1032,69,0	1/1:0,11:11:30.10:449,30,0	1/1:0,33:33:90.26:1322,90,0	1/1:1,5:6:15.05:224,15,0	1/1:2,25:27:72.24:1078,72,0	1/1:2,20:22:66.08:910,66,0	1/1:0,13:13:33.11:494,33,0	1/1:0,16:16:42.14:629,42,0	1/1:0,31:31:81.27:1212,81,0	1/1:1,20:21:51.17:764,51,0	1/1:0,28:28:75.25:1123,75,0	1/1:0,16:16:48.13:693,48,0	1/1:0,30:30:87.29:1296,87,0	1/1:0,10:10:30.10:450,30,0	1/1:0,10:10:30.10:449,30,0	1/1:0,13:13:39.13:584,39,0	1/1:2,17:18:48.16:714,48,0	1/1:1,18:19:42.14:607,42,0	1/1:0,23:23:60.20:891,60,0	1/1:1,21:22:48.16:712,48,0	1/1:1,14:15:45.08:647,45,0	1/1:0,21:21:63.21:935,63,0	1/1:0,24:24:69.23:1033,69,0	1/1:0,9:9:24.08:360,24,0
chr10	60941415	.	T	TA	500.12	PASS	AB=0.882;AC=3;AF=0.054;AN=56;BaseQRankSum=-2.948;DP=387;FS=2.260;HRun=9;HaplotypeScore=49.6699;InbreedingCoeff=0.4759;MQ=54.03;MQ0=8;MQRankSum=-5.430;QD=11.11;ReadPosRankSum=-2.797;VQSLOD=1.7679;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,2:25:0.62:0,1,454	0/0:7,0:7:17.98:0,18,153	0/0:5,0:3:9:0,9,78	0/0:5,0:4:8.03:0,8,58	0/0:14,0:15:35:0,35,288	0/0:12,0:11:26.98:0,27,234	0/1:13,2:14:42.35:42,0,132	1/1:11,19:29:31.09:563,31,0	0/0:17,1:18:14.85:0,15,358	0/0:25,0:24:59.98:0,60,521	0/0:9,0:9:20.98:0,21,182	0/0:8,0:8:24:0,24,208	0/0:7,0:7:18:0,18,156	0/0:15,0:15:38.97:0,39,338	0/0:8,0:7:24:0,24,208	0/0:5,0:5:15:0,15,130	0/0:17,0:17:41.97:0,42,364	0/0:5,0:5:15:0,15,130	0/0:14,0:13:29.99:0,30,259	0/0:19,0:19:50.98:0,51,443	0/0:21,1:21:26.76:0,27,449	0/0:21,1:22:29.80:0,30,488	0/0:16,0:16:41.99:0,42,365	0/0:16,2:18:14.85:0,15,357	0/0:8,0:8:24:0,24,208	0/0:13,0:13:35.99:0,36,313	0/0:11,0:11:26.99:0,27,232	0/0:10,0:10:23.97:0,24,208
chr10	60941514	.	TTA	T	10514.52	PASS	AC=48;AF=0.889;AN=54;BaseQRankSum=-8.595;DP=455;FS=21.363;HRun=0;HaplotypeScore=68.8902;InbreedingCoeff=0.8713;MQ=69.29;MQ0=7;MQRankSum=-2.024;QD=27.10;ReadPosRankSum=6.270;VQSLOD=3.5688;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,25:27:54.17:702,54,0	1/1:2,1:3:3.01:39,3,0	0/0:10,0:10:18.06:0,18,286	0/0:13,0:13:24.75:0,25,328	1/1:1,14:15:24.08:312,24,0	1/1:1,15:16:42.14:546,42,0	1/1:2,20:22:57.19:741,57,0	0/0:10,0:44:99:0,102,948	1/1:2,19:20:36.12:468,36,0	1/1:4,11:14:30.10:390,30,0	1/1:4,12:16:30.10:390,30,0	1/1:2,10:12:27.09:351,27,0	1/1:0,14:14:30.10:386,30,0	1/1:1,16:16:33.07:411,33,0	1/1:0,18:17:39.13:507,39,0	1/1:1,14:15:33.11:429,33,0	1/1:3,15:18:42.14:546,42,0	1/1:2,2:4:3.01:39,3,0	1/1:3,9:12:27.09:351,27,0	1/1:2,19:21:42.14:546,42,0	1/1:5,15:19:36.12:468,36,0	1/1:1,15:16:45.02:525,45,0	1/1:2,16:18:42.14:546,42,0	1/1:0,17:17:39.13:507,39,0	1/1:3,9:12:12.04:156,12,0	1/1:1,18:18:48.14:609,48,0	1/1:2,18:19:42.14:546,42,0	./.
chr10	60941759	.	AC	A	13090.64	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=9.743;DP=530;FS=7.507;HRun=1;HaplotypeScore=52.8552;InbreedingCoeff=0.9802;MQ=76.19;MQ0=0;MQRankSum=-2.657;QD=36.67;ReadPosRankSum=2.748;VQSLOD=4.9060;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,36:36:90.30:1255,90,0	1/1:0,8:8:24.08:335,24,0	0/0:16,0:16:44.87:0,45,587	0/0:22,0:22:5.62:0,6,698	1/1:0,27:27:81.06:1037,81,0	0/0:24,0:24:72.23:0,72,1057	0/0:19,0:18:51.09:0,51,747	0/0:21,0:21:63.14:0,63,873	1/1:0,12:12:33.11:460,33,0	1/1:0,18:18:54.16:735,54,0	1/1:0,16:16:42.14:586,42,0	1/1:0,14:14:39.13:537,39,0	1/1:0,14:14:36.12:502,36,0	1/1:0,13:13:30.10:419,30,0	1/1:0,27:27:75.25:1046,75,0	1/1:0,13:13:33.11:460,33,0	1/1:0,16:16:48.16:669,48,0	1/1:3,6:9:27.01:332,27,0	1/1:0,16:16:45.09:580,45,0	1/1:0,27:27:78.17:1044,78,0	1/1:0,19:19:45.15:628,45,0	0/0:26,0:26:75.13:0,75,1068	0/0:28,0:28:84.17:0,84,1188	0/0:17,0:17:51.09:0,51,723	1/1:0,21:21:42.14:586,42,0	1/1:0,18:18:54.11:683,54,0	1/1:0,21:21:57.19:794,57,0	1/1:2,10:12:32.84:404,33,0
chr10	60941857	.	CGA	C	263.56	PASS	AB=0.991;AC=37;AF=0.740;AN=50;BaseQRankSum=2.920;DP=477;FS=1.687;HRun=0;HaplotypeScore=77.4286;InbreedingCoeff=0.1904;MQ=67.59;MQ0=19;MQRankSum=-0.609;QD=0.85;ReadPosRankSum=-0.921;VQSLOD=1.6521;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:12,0:11:2.50:10,2,0	1/1:5,0:5:3:26,3,0	./.	./.	0/0:17,0:17:0:0,0,0	1/1:16,1:16:5.81:34,6,0	1/1:14,1:13:2.84:15,3,0	0/0:19,0:19:5.98:0,6,47	1/1:8,0:8:2.98:22,3,0	0/1:16,0:16:2.08:2,0,11	0/1:24,0:24:0.03:0,0,0	0/1:8,0:8:0:0,0,0	1/1:10,0:10:2.13:5,2,0	1/1:15,0:15:9.64:48,10,0	1/1:15,0:15:0.37:1,0,0	1/1:3,0:3:2.22:7,2,0	0/1:12,0:12:15.53:16,0,17	1/1:15,0:14:9.43:43,9,0	./.	1/1:30,0:30:7.41:42,7,0	0/0:18,0:17:2.99:0,3,24	0/1:14,1:15:0:0,0,0	1/1:11,6:17:5.80:45,6,0	1/1:7,2:7:4.78:25,5,0	1/1:19,0:19:2.74:12,3,0	0/1:24,0:24:12.03:12,0,22	0/1:14,0:14:13.06:13,0,16	1/1:6,0:6:0.47:1,0,0
chr10	60941896	.	GAGAGAA	G	2392.92	PASS	AB=1.000;AC=44;AF=0.846;AN=52;BaseQRankSum=-0.045;DP=375;FS=0.000;HRun=0;HaplotypeScore=120.1193;InbreedingCoeff=0.1414;MQ=46.92;MQ0=13;MQRankSum=3.462;QD=7.00;ReadPosRankSum=2.773;VQSLOD=1.8488;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:11,0:11:4.59:102,0,5	1/1:4,0:4:2.22:7,2,0	./.	./.	1/1:16,0:16:8.15:71,8,0	1/1:20,0:18:5.26:127,5,0	1/1:14,0:11:10.80:86,11,0	0/1:25,0:23:25.07:159,0,25	0/0:13,0:13:4.61:0,5,18	1/1:15,0:14:38.09:319,38,0	1/1:19,0:19:1.85:32,2,0	1/1:0,9:9:3.01:34,3,0	1/1:8,0:8:9.93:96,10,0	1/1:14,1:15:20.56:184,21,0	1/1:13,0:13:1.38:4,1,0	1/1:8,0:8:12.39:92,12,0	1/1:15,0:14:2.88:15,3,0	1/1:21,1:22:40.19:371,40,0	0/1:7,0:6:13.30:79,0,13	1/1:20,0:20:3.23:15,3,0	1/1:13,0:12:14.89:121,15,0	0/0:16,0:16:1.36:0,1,3	0/1:23,0:23:8.89:9,0,13	1/1:8,0:6:2.68:22,3,0	1/1:20,0:16:21.49:175,21,0	1/1:21,0:21:39.30:342,39,0	1/1:10,0:10:0.53:2,1,0	1/1:5,0:5:6.84:46,7,0
chr10	60941898	.	GAGAA	G	3015.55	PASS	AB=1.000;AC=46;AF=0.885;AN=52;BaseQRankSum=-0.113;DP=369;FS=0.000;HRun=0;HaplotypeScore=113.3429;InbreedingCoeff=0.1519;MQ=46.86;MQ0=9;MQRankSum=4.672;QD=8.84;ReadPosRankSum=3.717;VQSLOD=2.6756;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:11:13.81:120,14,0	1/1:5,0:5:2.88:15,3,0	./.	./.	1/1:15,0:15:11.26:94,11,0	1/1:21,0:19:7.95:153,8,0	1/1:15,0:12:11.08:89,11,0	0/1:25,0:23:27.41:165,0,27	0/0:13,0:13:4.31:0,4,14	1/1:2,13:14:39.51:311,40,0	1/1:18,1:19:2:32,2,0	1/1:9,0:9:2.94:18,3,0	1/1:8,0:8:17.96:146,18,0	1/1:14,0:14:25.58:258,26,0	1/1:0,13:13:2.92:36,3,0	1/1:8,0:8:11.92:91,12,0	1/1:15,0:14:3.01:51,3,0	1/1:23,0:22:45.73:362,46,0	0/1:8,0:7:10.95:96,0,11	1/1:20,0:20:8.08:121,8,0	1/1:12,0:11:14.89:121,15,0	0/0:14,0:14:1.83:0,2,3	1/1:21,0:21:1.73:19,2,0	1/1:7,0:6:2.54:22,3,0	1/1:21,1:18:29.54:291,30,0	1/1:20,0:20:41.56:410,42,0	1/1:9,0:9:2.82:36,3,0	1/1:5,0:5:8.95:69,9,0
chr10	60941900	.	GAA	G	3100.11	PASS	AB=1.000;AC=48;AF=0.923;AN=52;BaseQRankSum=-0.930;DP=366;FS=1.027;HRun=3;HaplotypeScore=101.0974;InbreedingCoeff=-0.0050;MQ=46.61;MQ0=10;MQRankSum=5.093;QD=8.91;ReadPosRankSum=4.499;VQSLOD=0.5785;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,0:10:17.40:156,17,0	1/1:0,5:5:3.01:45,3,0	./.	./.	1/1:14,0:14:10.94:93,11,0	1/1:20,0:18:8.24:154,8,0	1/1:15,0:12:10.86:89,11,0	0/1:26,0:24:26.18:174,0,26	1/1:1,12:13:0.19:26,0,0	1/1:15,0:14:39.89:298,40,0	1/1:2,17:19:1.78:16,2,0	1/1:9,0:9:2.94:18,3,0	1/1:7,0:7:17.96:146,18,0	1/1:13,1:14:24.11:276,24,0	1/1:13,0:13:2.94:18,3,0	1/1:9,0:9:14.92:116,15,0	1/1:4,11:14:3.01:40,3,0	1/1:23,0:22:46.49:358,46,0	0/1:10,0:8:9.41:116,0,9	1/1:2,17:19:8.09:103,8,0	1/1:11,0:10:14.89:121,15,0	0/0:14,0:14:1.07:0,1,2	1/1:19,0:19:2.14:20,2,0	1/1:8,0:6:2.39:21,2,0	1/1:21,1:18:29.72:271,30,0	1/1:1,18:19:43.07:418,43,0	1/1:1,8:9:2.88:36,3,0	1/1:4,0:4:8.95:69,9,0
chr10	60941902	.	AAG	A	450.28	PASS	AB=1.000;AC=33;AF=0.611;AN=54;BaseQRankSum=-0.486;DP=370;FS=21.651;HRun=0;HaplotypeScore=113.3996;InbreedingCoeff=0.2694;MQ=47.06;MQ0=10;MQRankSum=-0.119;QD=1.41;ReadPosRankSum=3.055;VQSLOD=0.5150;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:10,0:10:2.55:11,3,0	1/1:5,0:5:3:26,3,0	./.	0/0:5,0:2:6.01:0,6,71	0/1:15,0:15:0.55:1,0,19	0/0:20,0:18:2.47:0,2,7	0/1:14,0:11:0.11:0,0,0	1/1:13,12:23:1.85:327,2,0	1/1:13,0:13:2.80:13,3,0	1/1:14,0:13:2.51:8,3,0	0/1:18,0:18:0:0,0,0	0/1:9,0:9:0:0,0,0	0/0:8,0:8:0.47:0,0,1	1/1:14,0:14:9.54:42,10,0	0/1:13,0:13:0.11:1,0,0	0/1:9,0:9:0.01:0,0,0	0/1:15,0:14:13.91:15,0,14	1/1:23,0:22:5.60:25,6,0	1/1:11,0:9:0.22:1,0,0	1/1:18,0:18:7.74:43,8,0	0/0:10,0:9:0:0,0,0	0/1:14,0:14:0.09:0,0,0	0/1:22,0:22:0.06:0,0,0	0/0:7,0:6:0.47:0,0,1	0/1:25,0:21:3.26:3,0,40	1/1:20,0:19:3.18:20,3,0	1/1:8,0:8:2.76:19,3,0	0/1:5,0:5:0:0,0,0
chr10	60941924	.	GAGAGAGAA	G	1016.09	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-3.559;DP=360;FS=2.775;HRun=0;HaplotypeScore=131.8328;InbreedingCoeff=0.7956;MQ=52.17;MQ0=6;MQRankSum=-1.114;QD=18.14;ReadPosRankSum=-1.271;VQSLOD=3.0442;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:26.99:0,27,301	0/0:5,0:5:8.97:0,9,73	0/0:9,0:4:11.93:0,12,271	0/0:14,0:9:21.02:0,21,516	0/0:15,0:15:30.38:0,30,291	1/1:15,0:14:32.59:597,33,0	1/1:12,0:10:21.07:356,21,0	0/0:23,0:22:51:0,51,1071	0/0:9,0:9:5.96:0,6,45	0/0:14,0:13:17.14:0,17,221	0/0:18,0:18:26.83:0,27,250	0/0:9,0:9:6.02:0,6,101	0/0:8,0:8:20.95:0,21,179	0/0:16,0:16:29.87:0,30,292	0/0:14,0:14:11.96:0,12,123	0/0:7,0:7:20.83:0,21,157	0/0:14,0:13:12.03:0,12,151	0/0:22,0:22:24.18:0,24,326	0/0:11,0:10:29.96:0,30,298	0/0:23,0:23:35.88:0,36,359	0/0:6,0:6:11.97:0,12,99	1/1:0,12:12:11.66:131,12,0	1/1:0,14:14:2.72:36,3,0	1/1:3,0:3:3.01:51,3,0	0/0:21,0:18:41.97:0,42,431	0/0:22,0:21:56.87:0,57,617	0/0:9,0:9:15:0,15,152	0/0:4,0:4:8.99:0,9,88
chr10	60942039	.	G	GA	10611.93	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-11.006;DP=498;FS=12.556;HRun=8;HaplotypeScore=42.6112;InbreedingCoeff=0.9960;MQ=76.13;MQ0=0;MQRankSum=-1.824;QD=29.07;ReadPosRankSum=3.803;VQSLOD=3.9484;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,15:16:39.12:450,39,0	1/1:0,8:8:21.06:242,21,0	0/0:15,0:15:32.95:0,33,292	0/0:10,0:10:20.93:0,21,180	1/1:4,26:30:78.23:900,78,0	0/0:21,0:21:54.03:0,54,494	0/0:11,0:11:30.02:0,30,275	0/0:26,0:26:62.95:0,63,557	1/1:0,14:14:42.12:485,42,0	1/1:2,15:17:48.13:542,48,0	1/1:4,15:20:47.97:534,48,0	1/1:2,9:10:24.07:277,24,0	1/1:1,18:19:51.15:589,51,0	1/1:5,10:15:42.06:454,42,0	1/1:2,15:17:42.12:485,42,0	1/1:2,10:12:24.07:277,24,0	1/1:1,28:29:69.20:794,69,0	1/1:3,22:25:69.21:796,69,0	1/1:2,12:14:39.08:429,39,0	1/1:3,24:27:63.19:727,63,0	1/1:1,9:10:24.07:277,24,0	0/0:19,0:19:48.02:0,48,439	0/0:24,0:24:63.01:0,63,571	0/0:7,0:7:18.01:0,18,165	1/1:2,16:18:39.12:450,39,0	1/1:4,25:29:75.22:865,75,0	1/1:2,19:21:57.17:658,57,0	1/1:1,12:13:33.10:381,33,0
chr10	60942369	.	A	AT	10693.50	PASS	AB=1.000;AC=41;AF=0.732;AN=56;BaseQRankSum=-11.240;DP=486;FS=0.000;HRun=8;HaplotypeScore=40.9771;InbreedingCoeff=0.8922;MQ=69.06;MQ0=0;MQRankSum=-1.097;QD=28.29;ReadPosRankSum=2.871;VQSLOD=4.8418;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,23:25:30.19:596,30,0	1/1:0,8:8:24.07:277,24,0	0/1:7,0:6:22.58:23,0,43	0/0:8,0:7:8.99:0,9,78	1/1:2,28:30:78.19:885,78,0	0/0:13,0:13:33.02:0,33,302	0/0:9,0:9:18:0,18,165	0/0:29,0:29:72.02:0,72,651	1/1:0,11:11:33.10:381,33,0	1/1:7,28:35:84.23:955,84,0	1/1:4,21:25:63.15:712,63,0	1/1:6,14:20:17.67:457,18,0	1/1:2,11:13:27.08:312,27,0	1/1:0,11:11:33.10:381,33,0	1/1:2,11:13:33.10:381,33,0	1/1:0,16:16:39.12:450,39,0	1/1:0,5:5:15.04:173,15,0	1/1:2,12:14:30.09:346,30,0	1/1:0,14:14:42.12:484,42,0	1/1:3,21:25:66.03:741,66,0	1/1:3,12:15:36.11:415,36,0	0/0:14,0:14:36:0,36,324	0/0:17,0:17:42.01:0,42,384	0/0:18,0:18:51.03:0,51,467	1/1:1,18:19:48.14:554,48,0	1/1:0,23:23:69.19:785,69,0	1/1:2,34:36:87.26:1004,87,0	1/1:2,11:13:33.10:381,33,0
chr10	60942434	.	C	CT	1656.80	PASS	AB=0.600;AC=9;AF=0.161;AN=56;BaseQRankSum=-8.093;DP=497;FS=2.418;HRun=9;HaplotypeScore=64.7246;InbreedingCoeff=0.8919;MQ=73.78;MQ0=3;MQRankSum=-0.507;QD=21.52;ReadPosRankSum=1.090;VQSLOD=4.4569;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:28.49:0,28,302	0/0:6,0:6:12:0,12,104	0/0:26,0:11:14.48:0,14,91	0/0:33,0:23:10.24:0,10,212	0/0:25,0:27:64:0,64,525	1/1:3,12:15:36.10:398,36,0	1/1:2,8:10:24.06:265,24,0	0/0:25,0:25:51.42:0,51,443	0/0:11,0:11:23.98:0,24,208	0/0:23,0:23:35.94:0,36,312	0/0:20,1:21:23.78:0,24,431	0/0:7,0:7:14.99:0,15,130	0/0:17,0:17:47.99:0,48,417	0/0:10,0:10:26.97:0,27,228	0/0:20,0:20:50.96:0,51,439	0/0:14,0:14:38.99:0,39,338	0/0:13,0:13:38.98:0,39,335	0/0:11,0:11:23.97:0,24,208	0/0:12,0:12:26.98:0,27,231	0/0:24,0:24:56.96:0,57,495	0/0:14,0:14:38.94:0,39,331	0/1:4,8:12:1.73:208,0,2	1/1:3,20:23:28.09:538,28,0	1/1:4,12:17:38.94:411,39,0	0/0:20,0:20:41.98:0,42,364	0/0:21,0:22:47:0,47,397	0/0:34,0:34:74.96:0,75,651	0/0:7,0:7:15:0,15,130
chr10	60942780	.	T	TTATATATATA	3075.53	PASS	AB=1.000;AC=35;AF=0.700;AN=50;BaseQRankSum=-1.982;DP=184;FS=5.229;HRun=0;HaplotypeScore=66.6278;InbreedingCoeff=0.5290;MQ=79.42;MQ0=3;MQRankSum=-2.573;QD=31.07;ReadPosRankSum=-0.309;VQSLOD=2.4182;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:3,3:6:6.02:304,6,0	1/1:1,0:2:3.01:33,3,0	0/0:5,0:5:2.99:0,3,41	0/1:17,0:12:25.94:26,0,114	1/1:2,0:4:6.02:142,6,0	0/0:16,0:16:45.14:0,45,1295	0/0:7,0:7:9.03:0,9,283	0/0:39,0:39:74.36:0,74,1219	1/1:1,0:3:3.01:88,3,0	1/1:2,6:8:15.01:456,15,0	1/1:3,0:3:3:25,3,0	1/1:5,0:5:6.01:76,6,0	1/1:4,1:6:9.03:362,9,0	1/1:2,0:4:6.01:114,6,0	1/1:1,3:4:6.02:286,6,0	1/1:1,1:2:3.01:152,3,0	1/1:7,3:12:14.90:442,15,0	1/1:0,1:1:3.01:122,3,0	1/1:1,0:2:3.01:128,3,0	./.	1/1:7,0:8:3.01:95,3,0	0/0:3,0:3:6.02:0,6,189	0/0:6,0:6:12.03:0,12,280	0/0:6,0:5:12.03:0,12,288	./.	1/1:5,1:6:15:322,15,0	1/1:4,0:4:8.94:67,9,0	./.
chr10	60942785	.	TATATAG	T	1542.03	PASS	AB=1.000;AC=6;AF=0.125;AN=48;BaseQRankSum=-0.497;DP=169;FS=17.264;HRun=0;HaplotypeScore=52.7509;InbreedingCoeff=0.2431;MQ=76.30;MQ0=3;MQRankSum=-1.060;QD=29.09;ReadPosRankSum=-3.811;VQSLOD=1.0947;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:5:6.01:0,6,63	0/0:2,0:2:3.01:0,3,55	0/0:5,0:5:5.14:0,5,184	0/0:15,0:10:16.13:0,16,255	0/1:3,0:3:8.38:19,0,8	0/0:16,0:16:45.15:0,45,1451	0/0:4,0:4:9.03:0,9,302	1/1:8,30:38:90.19:1600,90,0	0/0:3,0:2:2.80:0,3,13	0/1:7,0:7:11.98:12,0,129	./.	1/1:5,0:5:3:26,3,0	0/0:5,0:5:9:0,9,145	0/0:4,0:4:2.81:0,3,14	0/0:4,0:4:5.05:0,5,69	0/0:1,0:1:3.01:0,3,62	0/0:12,0:12:11.71:0,12,198	0/0:2,0:2:1.55:0,2,4	0/0:1,0:1:2.50:0,2,9	./.	0/0:4,0:4:2.84:0,3,14	0/0:3,0:3:9.03:0,9,262	0/0:7,0:7:12.02:0,12,330	0/0:5,0:4:9.03:0,9,297	./.	0/0:5,0:5:9.03:0,9,138	0/0:4,0:4:2.97:0,3,21	./.
chr10	60942871	.	AAT	A	4668.67	PASS	AB=0.538;AC=37;AF=0.685;AN=54;BaseQRankSum=7.361;DP=245;FS=39.054;HRun=0;HaplotypeScore=45.3456;InbreedingCoeff=0.7425;MQ=75.12;MQ0=3;MQRankSum=-2.997;QD=31.76;ReadPosRankSum=4.502;VQSLOD=3.3163;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,7:7:18.06:232,18,0	1/1:0,3:3:6.02:77,6,0	0/0:7,0:6:3.01:0,3,35	0/0:8,0:6:12.35:0,12,88	1/1:0,14:14:36.12:463,36,0	0/0:20,0:20:57.19:0,57,959	0/0:6,0:6:12.04:0,12,202	0/0:42,0:42:93.32:0,93,1554	1/1:1,5:5:15.05:193,15,0	1/1:3,5:8:24.08:308,24,0	1/1:0,17:17:45.06:541,45,0	1/1:0,5:5:15.05:193,15,0	1/1:1,3:4:6.02:77,6,0	1/1:0,7:7:21.07:270,21,0	1/1:0,2:2:3.01:39,3,0	1/1:0,2:2:3.01:39,3,0	0/1:2,12:14:14.51:388,0,15	1/1:0,11:11:24.08:309,24,0	1/1:0,7:7:21.07:270,21,0	1/1:1,4:5:9.03:116,9,0	./.	0/0:3,0:3:9.03:0,9,149	0/0:10,0:10:24.08:0,24,404	0/0:2,0:2:6.02:0,6,101	1/1:0,9:9:24.08:309,24,0	1/1:1,8:9:21.07:267,21,0	1/1:0,7:7:15.05:193,15,0	1/1:0,10:10:30.10:386,30,0
chr10	60943172	.	AAAGACG	A	11133.91	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=12.132;DP=281;FS=29.794;HRun=0;HaplotypeScore=89.2923;InbreedingCoeff=0.8795;MQ=82.24;MQ0=0;MQRankSum=-11.640;QD=57.69;ReadPosRankSum=5.330;VQSLOD=3.0752;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,9:16:30.04:611,30,0	1/1:0,3:3:9.03:213,9,0	0/0:10,0:10:27.08:0,27,811	0/0:16,0:16:42.14:0,42,1408	1/1:0,11:11:33.11:761,33,0	0/0:22,0:22:63.22:0,63,2092	0/0:11,0:11:33.11:0,33,1176	0/0:20,0:20:60.20:0,60,2040	1/1:0,5:5:12.04:284,12,0	1/1:2,10:12:30.10:709,30,0	1/1:3,10:14:33.11:780,33,0	1/1:2,11:13:36.12:851,36,0	1/1:1,7:8:18.06:425,18,0	1/1:0,4:4:9.03:213,9,0	1/1:1,9:10:30.10:707,30,0	1/1:1,8:9:24.08:567,24,0	1/1:6,7:13:24.08:540,24,0	1/1:1,1:2:3.01:71,3,0	1/1:3,15:18:45.15:1064,45,0	1/1:1,2:3:6.02:142,6,0	1/1:4,6:10:17.77:331,18,0	0/0:2,0:2:3.01:0,3,106	0/0:3,0:3:9.03:0,9,319	0/0:4,0:4:12.04:0,12,428	1/1:1,9:10:27.09:621,27,0	1/1:1,13:14:42.14:992,42,0	1/1:2,11:13:39.13:899,39,0	1/1:0,5:5:15.05:355,15,0
chr10	60943189	.	G	GA	7417.83	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=10.191;DP=288;FS=54.122;HRun=1;HaplotypeScore=80.0214;InbreedingCoeff=0.8717;MQ=81.39;MQ0=1;MQRankSum=-11.127;QD=37.46;ReadPosRankSum=3.984;VQSLOD=0.8366;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,13:14:39.09:537,39,0	1/1:0,5:5:12.04:179,12,0	0/0:15,0:13:29.97:0,30,375	0/0:13,0:13:22.63:0,23,365	1/1:1,10:11:24.08:359,24,0	0/0:17,0:17:51.14:0,51,624	0/0:10,0:10:30.10:0,30,389	0/0:26,0:26:75.23:0,75,950	1/1:0,7:7:18.06:269,18,0	1/1:0,12:12:36.12:539,36,0	1/1:0,12:12:30.10:448,30,0	1/1:2,11:13:39.12:555,39,0	1/1:1,5:6:18.06:259,18,0	1/1:1,3:4:9.03:134,9,0	1/1:0,11:11:33.04:466,33,0	1/1:1,7:8:21.07:304,21,0	1/1:0,15:15:39.09:558,39,0	1/1:1,0:1:2.97:20,3,0	1/1:2,18:20:57.19:849,57,0	1/1:0,2:2:3.01:45,3,0	1/1:0,9:9:9.03:134,9,0	0/0:1,0:1:3.01:0,3,39	0/0:3,0:3:9.03:0,9,117	0/0:5,0:5:15.04:0,15,182	1/1:1,12:13:24.08:359,24,0	1/1:0,16:16:48.16:718,48,0	1/1:1,12:13:30.10:448,30,0	1/1:2,4:6:18.04:237,18,0
chr10	60943347	.	A	AC	1309.68	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-2.855;DP=259;FS=4.465;HRun=1;HaplotypeScore=42.9371;InbreedingCoeff=0.8742;MQ=99.78;MQ0=0;MQRankSum=-1.615;QD=27.87;ReadPosRankSum=-0.042;VQSLOD=3.2102;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:33.03:0,33,391	0/0:4,0:4:11.99:0,12,135	0/0:13,0:13:27.03:0,27,277	0/0:23,0:23:60.13:0,60,705	0/0:15,0:15:41.71:0,42,435	1/1:0,11:11:27.09:391,27,0	1/1:1,7:8:21.07:307,21,0	0/0:26,0:26:72.19:0,72,903	0/0:6,0:6:8.91:0,9,76	0/0:13,0:13:36.06:0,36,422	0/0:10,0:10:30.01:0,30,349	0/0:4,0:4:8.96:0,9,95	0/0:10,0:10:26.99:0,27,310	0/0:4,0:4:11.86:0,12,94	0/0:7,0:7:20.96:0,21,231	0/0:4,0:4:9.03:0,9,116	0/0:5,0:5:11.99:0,12,135	0/0:1,0:1:3.01:0,3,39	0/0:10,0:10:27:0,27,312	0/0:15,0:15:45.07:0,45,547	0/0:4,0:4:12:0,12,136	1/1:0,6:6:12.04:179,12,0	1/1:0,11:11:18.06:255,18,0	1/1:0,11:11:26.88:347,27,0	0/0:10,0:10:29.94:0,30,328	0/0:8,0:8:24.08:0,24,310	0/0:4,0:4:12.04:0,12,155	0/0:5,0:5:15.05:0,15,194
chr10	60943368	.	C	CCCACTGAGATCATTCAACATTGATA	17444.97	PASS	AB=0.841;AC=46;AF=0.958;AN=48;BaseQRankSum=-0.311;DP=133;FS=23.135;HRun=0;HaplotypeScore=128.6360;InbreedingCoeff=0.0349;MQ=102.97;MQ0=0;MQRankSum=-2.728;QD=141.83;ReadPosRankSum=2.515;VQSLOD=2.8868;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,0:9:20.99:1105,21,0	1/1:2,0:2:6.02:259,6,0	1/1:1,1:6:18.06:1030,18,0	0/1:8,0:15:58.33:976,0,58	1/1:11,0:11:21.07:1551,21,0	1/1:8,0:8:21.07:1390,21,0	1/1:5,0:5:12.04:759,12,0	1/1:15,0:15:39.13:2354,39,0	0/1:1,0:1:0:0,0,0	1/1:4,0:4:12.04:1129,12,0	1/1:7,0:7:11.95:583,12,0	1/1:2,0:2:5.98:328,6,0	1/1:2,0:2:6.02:253,6,0	1/1:3,0:3:3.01:114,3,0	1/1:4,0:4:5.98:327,6,0	./.	1/1:3,0:3:6.02:616,6,0	1/1:1,0:1:3.01:307,3,0	1/1:6,0:6:18.04:930,18,0	1/1:6,0:6:15.05:1170,15,0	./.	./.	1/1:3,0:3:2.84:14,3,0	./.	1/1:5,0:5:15.05:1343,15,0	1/1:3,0:3:8.94:379,9,0	1/1:1,0:1:3.01:254,3,0	1/1:1,0:1:3.01:275,3,0
chr10	60945695	.	GA	G	9862.18	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=12.170;DP=562;FS=2.093;HRun=8;HaplotypeScore=57.0379;InbreedingCoeff=0.9989;MQ=77.34;MQ0=0;MQRankSum=-1.184;QD=24.78;ReadPosRankSum=4.569;VQSLOD=5.4460;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,12:14:28.86:265,29,0	1/1:0,10:10:30.05:290,30,0	0/0:20,1:21:31.96:0,32,348	0/0:12,0:12:27.08:0,27,319	1/1:1,21:22:57.09:550,57,0	0/0:25,0:25:75.23:0,75,906	0/0:12,0:12:33.10:0,33,398	0/0:30,0:30:75.14:0,75,855	1/1:1,16:17:45.07:435,45,0	1/1:2,17:19:48.06:459,48,0	1/1:0,36:36:93.13:898,93,0	1/1:0,12:12:36.06:348,36,0	1/1:2,27:29:75.12:724,75,0	1/1:2,11:13:30.04:290,30,0	1/1:1,23:24:51.08:493,51,0	1/1:1,16:17:45.07:435,45,0	1/1:1,12:13:24.04:232,24,0	1/1:4,15:19:42.07:405,42,0	1/1:0,22:22:66.07:627,66,0	1/1:0,31:31:90.14:869,90,0	1/1:1,14:15:39.06:377,39,0	0/0:32,0:32:93.24:0,93,1085	0/0:23,0:23:63.18:0,63,750	0/0:9,0:9:27.08:0,27,326	1/1:1,25:26:66.11:637,66,0	1/1:0,12:12:36.05:342,36,0	1/1:3,22:25:66.10:637,66,0	1/1:0,22:22:57.09:550,57,0
chr10	60947276	.	C	CTAA	4104.63	PASS	AC=38;AF=0.704;AN=54;BaseQRankSum=-3.787;DP=466;FS=0.559;HRun=0;HaplotypeScore=41.5532;InbreedingCoeff=0.7845;MQ=67.88;MQ0=6;MQRankSum=-4.109;QD=13.46;ReadPosRankSum=1.106;VQSLOD=3.0782;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	1/1:0,8:4:6.02:134,6,0	0/0:20,0:19:45.13:0,45,705	0/0:18,0:18:42.12:0,42,644	1/1:3,25:12:15.05:326,15,0	0/0:27,0:27:78.25:0,78,1246	0/0:14,0:14:36.12:0,36,585	0/0:27,0:27:75.23:0,75,1160	1/1:1,13:10:9.03:201,9,0	1/1:4,21:14:17.85:392,18,0	1/1:8,17:14:15.05:304,15,0	1/1:1,8:4:3.01:67,3,0	1/1:2,19:14:21.07:469,21,0	1/1:2,11:9:9.03:201,9,0	1/1:3,18:9:9.03:200,9,0	1/1:1,15:8:6.02:134,6,0	1/1:3,8:7:3.01:67,3,0	1/1:2,4:5:9.03:201,9,0	1/1:1,2:2:3.01:40,3,0	1/1:4,23:18:21.07:411,21,0	1/1:4,2:5:8.99:100,9,0	0/0:12,0:12:33.11:0,33,537	0/0:24,0:24:63.21:0,63,1029	0/0:12,0:12:30.10:0,30,490	1/1:3,15:10:3.01:67,3,0	1/1:2,22:15:15.01:255,15,0	1/1:4,18:15:18.06:402,18,0	1/1:3,3:5:6.02:134,6,0
chr10	60947491	.	C	CA	7956.57	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-9.880;DP=446;FS=5.581;HRun=8;HaplotypeScore=38.4262;InbreedingCoeff=0.9876;MQ=60.19;MQ0=11;MQRankSum=-1.579;QD=24.41;ReadPosRankSum=3.217;VQSLOD=5.2752;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,24:29:38.74:699,39,0	1/1:0,5:5:15:158,15,0	0/0:11,0:8:21.01:0,21,191	0/0:9,0:7:17.95:0,18,150	1/1:4,24:27:63.15:712,63,0	0/0:19,0:19:47.98:0,48,431	0/0:8,0:8:24.01:0,24,220	0/0:32,0:29:69.03:0,69,629	1/1:1,10:10:27.08:312,27,0	1/1:2,22:23:63.18:718,63,0	1/1:4,19:23:48.09:592,48,0	1/1:1,14:15:39.12:450,39,0	1/1:5,10:15:24.05:265,24,0	1/1:1,13:13:30.09:346,30,0	1/1:3,13:13:21.06:242,21,0	1/1:1,16:16:33.10:381,33,0	1/1:2,11:12:24.07:274,24,0	1/1:0,7:7:21.06:242,21,0	1/1:6,14:17:44.97:499,45,0	1/1:7,11:17:36.06:396,36,0	1/1:3,6:9:18.05:206,18,0	0/0:12,0:12:30.02:0,30,275	0/0:10,0:11:29.05:0,29,253	0/0:18,0:16:42.02:0,42,384	1/1:1,11:11:21.06:242,21,0	1/1:2,23:22:57.12:633,57,0	1/1:2,16:16:36.11:415,36,0	1/1:1,5:6:15.04:173,15,0
chr10	60950179	.	TTGTGTG	T	1344.34	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-0.178;DP=512;FS=2.626;HRun=0;HaplotypeScore=117.7595;InbreedingCoeff=0.8075;MQ=64.94;MQ0=14;MQRankSum=-6.153;QD=12.00;ReadPosRankSum=-1.002;VQSLOD=2.8227;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:24:18.02:0,18,176	0/0:4,0:4:6.02:0,6,162	0/0:23,0:14:3.01:0,3,44	0/0:24,0:18:6.02:0,6,103	0/0:18,0:18:20.68:0,21,363	1/1:8,10:18:26.87:472,27,0	1/1:8,6:14:11.97:183,12,0	1/1:20,0:26:12.91:109,13,0	0/0:14,0:14:29.01:0,29,228	0/0:24,0:21:33.09:0,33,617	0/0:19,0:19:15.05:0,15,341	0/0:11,0:11:9.02:0,9,149	0/0:15,0:15:13.02:0,13,447	0/0:21,0:21:33.11:0,33,736	0/0:16,0:16:15.05:0,15,364	0/0:8,0:8:15.05:0,15,369	0/0:25,0:24:29.82:0,30,603	0/0:9,0:8:9.03:0,9,100	0/0:10,0:9:18.64:0,19,302	0/0:27,0:27:30.10:0,30,614	0/0:13,0:13:20.89:0,21,464	1/1:9,5:14:2.64:251,3,0	1/1:12,12:26:24.22:411,24,0	1/1:5,6:11:7.24:87,7,0	0/0:32,0:31:36.12:0,36,895	0/0:26,0:24:30.05:0,30,565	0/0:29,0:29:27.97:0,28,677	0/0:7,0:7:9.03:0,9,262
chr10	60950218	.	T	TGG	4500.82	PASS	AB=0.649;AC=35;AF=0.625;AN=56;BaseQRankSum=-4.252;DP=484;FS=1.944;HRun=1;HaplotypeScore=85.9808;InbreedingCoeff=0.4861;MQ=58.46;MQ0=11;MQRankSum=5.190;QD=14.81;ReadPosRankSum=2.195;VQSLOD=2.2067;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:21:30.35:330,30,0	1/1:4,0:4:11.99:132,12,0	0/0:35,0:18:46.79:0,47,422	0/0:26,0:15:37.09:0,37,327	1/1:19,0:19:5.59:147,6,0	0/0:25,0:25:56.85:0,57,472	0/0:14,0:15:28.77:0,29,238	0/0:27,0:27:56.09:0,56,508	1/1:17,0:17:26.66:220,27,0	1/1:3,9:12:4.14:289,4,0	0/1:2,10:13:22.13:80,0,22	1/1:0,6:7:3.01:61,3,0	1/1:2,13:16:0.62:230,1,0	1/1:1,14:15:9.47:294,9,0	1/1:0,13:14:12.04:237,12,0	0/1:3,8:10:17.27:109,0,17	0/1:6,14:24:11.78:236,0,12	1/1:7,0:9:14.11:104,14,0	1/1:2,8:11:22.06:245,22,0	1/1:3,19:24:8.81:325,9,0	1/1:14,1:15:29.64:370,30,0	0/0:15,0:15:32.95:0,33,285	0/0:24,0:24:50.73:0,51,424	0/0:13,0:12:18.78:0,19,140	0/1:5,18:23:29.43:196,0,29	1/1:2,16:19:1.87:380,2,0	1/1:2,16:18:21.16:417,21,0	0/1:7,0:7:13.24:98,0,13
chr10	60952203	.	CATGTACT	C	2808.18	PASS	AB=0.661;AC=15;AF=0.577;AN=26;BaseQRankSum=6.007;DP=617;FS=41.747;HRun=0;HaplotypeScore=52.2357;InbreedingCoeff=-0.1028;MQ=15.71;MQ0=344;MQRankSum=0.802;QD=14.63;ReadPosRankSum=0.195;VQSLOD=0.6574;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	0/1:7,7:9:99:291,0,224	./.	./.	1/1:12,10:16:17.03:260,17,0	./.	./.	./.	./.	0/1:10,11:8:99:354,0,222	1/1:5,11:13:27.09:548,27,0	./.	0/0:15,4:5:0:0,0,0	./.	./.	./.	1/1:11,4:1:3.01:62,3,0	./.	./.	0/1:8,16:18:63.51:648,0,64	./.	0/0:25,0:16:3.01:0,3,122	0/0:26,0:18:5.75:0,6,245	./.	0/1:6,11:11:95.36:465,0,95	0/1:22,9:10:99:159,0,821	1/1:16,8:7:3.01:63,3,0	1/1:5,2:4:3.01:63,3,0
chr10	60952470	.	CGATA	C	1668.24	PASS	AB=0.860;AC=15;AF=0.313;AN=48;BaseQRankSum=5.119;DP=685;FS=13.734;HRun=0;HaplotypeScore=71.7416;InbreedingCoeff=-0.2899;MQ=34.93;MQ0=137;MQRankSum=-2.028;QD=5.15;ReadPosRankSum=1.869;VQSLOD=0.4948;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:60,0:40:44.99:0,45,1046	0/1:8,1:9:24.72:25,0,397	./.	./.	0/0:22,0:16:24.08:0,24,557	0/1:11,4:11:99:122,0,124	1/1:23,6:13:9.03:128,9,0	./.	0/0:29,0:21:12.04:0,12,279	0/1:24,2:15:58.51:59,0,545	0/0:11,0:11:18.06:0,18,417	0/1:19,2:16:99:101,0,191	0/1:22,4:20:99:156,0,319	0/1:20,4:22:99:162,0,185	0/0:30,1:27:8.41:0,8,1140	./.	0/0:44,0:39:42.14:0,42,977	0/0:16,0:11:15.05:0,15,349	0/1:17,1:12:30.74:31,0,264	0/0:27,0:22:24.08:0,24,549	0/1:39,1:36:9.67:10,0,732	0/0:10,0:8:15.05:0,15,348	0/1:18,2:17:18.70:19,0,530	0/0:28,0:21:9.03:0,9,206	0/1:12,10:21:42.56:321,0,43	0/1:16,8:20:99:326,0,238	0/1:26,8:28:99:321,0,442	0/1:9,1:9:36.74:37,0,130
chr10	60952626	.	C	CT	4951.45	PASS	AB=1.000;AC=41;AF=0.732;AN=56;BaseQRankSum=-0.421;DP=346;FS=5.918;HRun=7;HaplotypeScore=51.8701;InbreedingCoeff=0.8420;MQ=58.95;MQ0=17;MQRankSum=-4.781;QD=20.63;ReadPosRankSum=1.468;VQSLOD=4.1975;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,7:9:24.05:267,24,0	1/1:1,4:5:12.04:144,12,0	0/0:15,0:9:2.18:0,2,143	0/1:13,0:8:0.12:0,0,78	1/1:7,13:18:27.07:315,27,0	0/0:23,0:23:60.02:0,60,562	0/0:7,0:5:9.01:0,9,87	0/0:36,0:32:75.10:0,75,720	1/1:1,6:6:15.05:181,15,0	1/1:5,11:13:33.09:383,33,0	1/1:3,9:10:24.07:290,24,0	1/1:3,7:7:15.05:181,15,0	1/1:4,1:3:3.01:36,3,0	1/1:3,7:8:17.99:199,18,0	1/1:2,5:6:15.05:181,15,0	1/1:3,8:11:27.08:326,27,0	1/1:3,6:5:15.05:181,15,0	1/1:4,4:6:11.77:121,12,0	1/1:8,10:11:23.91:280,24,0	1/1:7,9:13:30.05:346,30,0	1/1:2,4:6:14.96:148,15,0	0/0:7,0:7:21.03:0,21,202	0/0:11,0:8:21.03:0,21,202	0/0:7,0:7:18.03:0,18,174	1/1:3,9:9:21.06:254,21,0	1/1:2,12:12:33.09:387,33,0	1/1:5,17:21:53.96:652,54,0	1/1:1,5:5:8.98:80,9,0
chr10	60952651	.	A	AT	4391.49	PASS	AB=0.813;AC=40;AF=0.714;AN=56;BaseQRankSum=9.754;DP=312;FS=7.091;HRun=7;HaplotypeScore=71.7077;InbreedingCoeff=0.8088;MQ=51.38;MQ0=6;MQRankSum=-0.134;QD=19.87;ReadPosRankSum=1.551;VQSLOD=4.2997;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,8:11:17.55:232,18,0	1/1:1,7:8:21.06:251,21,0	0/0:17,0:6:12.02:0,12,114	0/1:17,0:5:1.19:1,0,24	1/1:5,11:14:27.06:309,27,0	0/0:17,0:16:48.04:0,48,450	0/0:5,0:5:12.02:0,12,116	0/0:34,0:28:78.07:0,78,742	1/1:3,4:7:12.03:136,12,0	1/1:4,11:12:30.07:337,30,0	1/1:4,9:12:27.07:310,27,0	1/1:2,6:5:9.03:107,9,0	1/1:0,3:3:9.03:106,9,0	1/1:0,9:8:18.05:215,18,0	1/1:0,6:6:18.05:214,18,0	1/1:2,6:7:12.04:144,12,0	1/1:3,10:11:24.02:270,24,0	0/1:4,6:8:1.14:147,0,1	1/1:4,10:9:21.06:249,21,0	1/1:4,9:13:28.93:331,29,0	1/1:1,4:5:12.04:140,12,0	0/0:4,0:4:8.88:0,9,73	0/0:6,0:6:9.01:0,9,87	0/0:4,0:4:8.96:0,9,72	1/1:1,13:12:30.09:357,30,0	1/1:2,8:7:18.06:214,18,0	1/1:8,6:13:24.03:261,24,0	1/1:3,1:3:8.91:61,9,0
chr10	60954825	.	A	AT	9490.87	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=7.293;DP=304;FS=2.982;HRun=1;HaplotypeScore=89.4570;InbreedingCoeff=0.9299;MQ=74.62;MQ0=0;MQRankSum=-7.606;QD=41.44;ReadPosRankSum=3.158;VQSLOD=5.2601;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,17:17:30.10:478,30,0	1/1:0,3:3:9.03:144,9,0	0/0:13,0:13:36.12:0,36,497	0/0:8,0:8:24.08:0,24,336	1/1:1,22:22:51.16:812,51,0	0/0:11,0:11:24.08:0,24,334	0/0:9,0:9:18.06:0,18,252	0/0:21,0:21:63.21:0,63,877	1/1:0,5:5:12.04:192,12,0	1/1:1,10:11:33.11:515,33,0	1/1:0,16:16:39.13:621,39,0	1/1:0,10:10:27.09:431,27,0	1/1:0,9:10:30.10:470,30,0	1/1:0,7:7:18.06:287,18,0	1/1:0,6:6:15.05:239,15,0	1/1:0,7:7:21.07:335,21,0	1/1:2,12:14:42.14:670,42,0	1/1:0,4:4:6.02:96,6,0	1/1:0,11:11:30.10:479,30,0	1/1:0,17:17:48.16:766,48,0	1/1:0,7:7:21.07:336,21,0	0/0:3,0:3:9.03:0,9,126	0/0:5,0:5:15.05:0,15,210	0/0:4,0:4:6.02:0,6,84	1/1:1,20:21:48.16:766,48,0	1/1:0,10:10:30.10:469,30,0	1/1:0,18:18:51.17:814,51,0	1/1:0,12:12:36.12:572,36,0
chr10	60954842	.	A	AAC	1046.59	PASS	AB=0.930;AC=20;AF=0.417;AN=48;BaseQRankSum=4.499;DP=284;FS=3.648;HRun=0;HaplotypeScore=133.7640;InbreedingCoeff=0.3880;MQ=56.15;MQ0=1;MQRankSum=-5.871;QD=6.54;ReadPosRankSum=-0.054;VQSLOD=2.9170;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:16,0:16:8.22:43,0,8	./.	0/0:8,0:6:11.87:0,12,126	0/0:12,0:7:12.04:0,12,150	0/0:20,1:20:0:0,0,0	0/0:7,0:7:12.01:0,12,123	0/0:9,0:9:12:0,12,111	0/0:21,0:20:39:0,39,373	0/1:3,0:3:0:0,0,0	1/1:10,1:11:15.25:180,15,0	1/1:13,3:16:2.99:24,3,0	./.	0/1:9,2:11:0.43:13,0,0	./.	0/0:5,1:6:2.94:0,3,18	0/0:5,3:8:0:0,0,0	0/1:16,0:16:5.59:36,0,6	0/1:4,0:5:9.11:18,0,9	1/1:13,1:13:9.23:245,9,0	1/1:13,3:16:5.98:47,6,0	0/0:6,0:6:2.94:0,3,18	./.	0/0:4,0:4:8.98:0,9,72	0/0:4,0:4:2.90:0,3,16	1/1:12,5:17:2.96:25,3,0	1/1:6,4:10:25.28:318,25,0	1/1:15,1:16:23.73:190,24,0	0/1:8,1:9:11.13:58,0,11
chr10	60954860	.	C	CAT	1364.78	PASS	AB=0.964;AC=21;AF=0.583;AN=36;BaseQRankSum=-1.756;DP=275;FS=2.826;HRun=0;HaplotypeScore=140.5689;InbreedingCoeff=0.0376;MQ=38.43;MQ0=1;MQRankSum=1.092;QD=9.22;ReadPosRankSum=-0.225;VQSLOD=3.3304;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:18:2.51:0,3,18	./.	0/1:8,0:4:2.17:2,0,33	0/0:12,0:4:3.01:0,3,39	./.	1/1:2,6:8:6.02:102,6,0	1/1:1,5:6:6.02:102,6,0	0/1:20,10:29:95.53:616,0,96	1/1:4,0:4:3.01:36,3,0	0/1:10,0:10:25.95:68,0,26	0/1:15,0:16:0:0,0,0	./.	./.	./.	./.	./.	0/0:11,0:12:1.65:0,2,35	0/1:8,0:8:20.37:39,0,20	0/1:18,0:18:45.53:142,0,46	./.	0/0:2,0:2:3.01:0,3,37	./.	1/1:1,1:2:6.02:102,6,0	1/1:0,2:2:3.01:51,3,0	./.	1/1:8,0:9:20.85:166,21,0	1/1:11,0:14:7.22:53,7,0	0/1:9,0:11:3.83:4,0,28
chr10	60954862	.	T	TAC	786.99	PASS	AB=0.982;AC=17;AF=0.370;AN=46;BaseQRankSum=-0.892;DP=264;FS=2.020;HRun=0;HaplotypeScore=136.5769;InbreedingCoeff=0.0263;MQ=37.60;MQ0=1;MQRankSum=0.267;QD=6.30;ReadPosRankSum=1.283;VQSLOD=3.5089;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:17,0:16:11.42:36,0,11	./.	0/0:8,0:4:7.92:0,8,70	0/0:11,0:3:6.02:0,6,75	0/0:17,0:16:0:0,0,0	0/1:7,0:7:15.96:43,0,16	1/1:5,0:5:6:52,6,0	0/1:29,0:28:99:263,0,258	1/1:2,1:3:3.01:53,3,0	0/1:11,1:12:46.14:46,0,104	0/0:16,1:17:2.90:0,3,16	./.	0/0:8,0:8:2.94:0,3,18	./.	0/0:7,0:7:3:0,3,25	0/0:6,0:6:0:0,0,0	0/0:9,1:10:2.32:0,2,31	0/1:7,0:7:14.17:92,0,14	0/1:19,1:18:99:153,0,129	./.	0/0:2,0:2:3.01:0,3,46	./.	1/1:2,0:2:6:52,6,0	1/1:2,0:2:3:27,3,0	0/0:15,0:15:0:0,0,0	1/1:8,0:8:12.09:71,12,0	0/1:13,0:13:31.18:31,0,44	0/0:11,0:11:10.60:0,11,64
chr10	60954866	.	T	TAC	639.74	PASS	AB=0.956;AC=20;AF=0.476;AN=42;BaseQRankSum=-0.473;DP=257;FS=5.352;HRun=0;HaplotypeScore=133.8912;InbreedingCoeff=-0.0813;MQ=37.34;MQ0=1;MQRankSum=0.545;QD=4.57;ReadPosRankSum=0.964;VQSLOD=2.6697;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:15,1:15:4.26:24,4,0	./.	0/1:8,0:4:10.81:11,0,46	0/0:11,0:3:3.01:0,3,46	0/0:16,0:15:0:0,0,0	0/1:7,0:7:15.95:43,0,16	1/1:5,0:5:6:52,6,0	0/1:31,0:30:99:180,0,457	1/1:3,0:3:2.94:18,3,0	0/1:12,1:13:72.23:72,0,121	0/0:16,0:16:2.85:0,3,21	./.	./.	./.	./.	0/0:6,0:6:0:0,0,0	0/1:8,1:9:9.88:43,0,10	0/1:6,1:7:8.20:63,0,8	0/1:16,1:16:99:113,0,152	./.	0/0:2,0:2:3.01:0,3,46	./.	1/1:2,0:2:6:52,6,0	1/1:2,0:2:3:27,3,0	0/0:14,0:14:0:0,0,0	1/1:7,0:7:11.90:49,12,0	0/1:13,0:13:15.47:15,0,52	0/0:10,0:10:6.04:0,6,67
chr10	60954870	.	CAT	C	166.99	PASS	AB=0.930;AC=9;AF=0.281;AN=32;BaseQRankSum=3.553;DP=240;FS=2.432;HRun=0;HaplotypeScore=127.2282;InbreedingCoeff=-0.0547;MQ=36.31;MQ0=3;MQRankSum=-1.099;QD=1.96;ReadPosRankSum=3.941;VQSLOD=2.3299;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:16,1:16:3.94:4,0,12	./.	0/1:7,0:4:0:0,0,0	./.	./.	0/0:5,0:5:6.02:0,6,97	0/0:3,0:3:6.02:0,6,94	0/0:32,0:30:86.68:0,87,1252	0/0:2,0:2:3:0,3,27	0/1:10,0:10:21.34:21,0,105	0/0:13,0:13:0:0,0,0	./.	./.	./.	./.	./.	0/0:7,1:8:3.59:0,4,10	0/1:5,2:7:12.85:37,0,13	0/1:14,2:15:43.53:119,0,44	./.	./.	./.	0/0:2,0:2:5.99:0,6,68	0/0:2,0:2:3.01:0,3,36	./.	0/1:7,0:7:6.05:13,0,6	1/1:11,1:12:7.46:29,7,0	0/1:8,1:9:28.53:46,0,29
chr10	60954888	.	CAT	C	557.86	PASS	AB=0.768;AC=10;AF=0.357;AN=28;BaseQRankSum=3.509;DP=201;FS=24.587;HRun=0;HaplotypeScore=104.6157;InbreedingCoeff=-0.1005;MQ=28.70;MQ0=7;MQRankSum=0.220;QD=8.58;ReadPosRankSum=2.512;VQSLOD=1.2967;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,1:17:2.03:0,2,5	./.	./.	./.	./.	0/0:3,0:3:5.99:0,6,65	0/0:2,0:2:2.98:0,3,21	0/0:30,0:27:80.93:0,81,774	1/1:1,1:2:3.01:40,3,0	0/1:4,3:9:39.43:162,0,39	0/0:5,4:9:0:0,0,0	./.	./.	./.	./.	./.	0/1:6,1:7:3.21:11,0,3	0/1:6,1:7:28.38:48,0,28	0/1:13,3:14:72.04:129,0,72	./.	./.	./.	0/0:1,0:1:2.98:0,3,21	./.	./.	1/1:1,1:4:6.02:77,6,0	0/1:6,3:10:35.26:64,0,35	0/1:5,3:9:9.85:129,0,10
chr10	60956480	.	TG	T	327.88	PASS	AB=0.739;AC=2;AF=0.036;AN=56;BaseQRankSum=6.350;DP=604;FS=5.507;HRun=4;HaplotypeScore=56.3590;InbreedingCoeff=-0.0248;MQ=69.28;MQ0=11;MQRankSum=5.465;QD=8.86;ReadPosRankSum=-3.836;VQSLOD=-0.6851;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:57.19:0,57,798	0/0:10,0:10:27.09:0,27,378	0/1:10,7:10:17.92:228,0,18	0/1:14,6:9:83.70:189,0,84	0/0:32,0:32:93.31:0,93,1291	0/0:23,0:23:69.23:0,69,966	0/0:15,0:15:45.15:0,45,630	0/0:30,0:29:72.23:0,72,979	0/0:20,0:20:60.20:0,60,840	0/0:24,0:24:66.22:0,66,924	0/0:25,0:25:75.25:0,75,1049	0/0:19,0:19:54.13:0,54,733	0/0:26,0:26:72.22:0,72,989	0/0:20,0:20:57.19:0,57,797	0/0:23,0:23:66.22:0,66,923	0/0:18,0:17:54.18:0,54,756	0/0:19,0:19:54.18:0,54,756	0/0:13,0:13:36.12:0,36,504	0/0:16,1:16:10.37:0,10,553	0/0:33,0:33:99:0,99,1385	0/0:23,0:23:66.22:0,66,925	0/0:26,0:26:78.26:0,78,1092	0/0:33,0:33:93.31:0,93,1300	0/0:14,0:14:36.12:0,36,504	0/0:35,0:35:99:0,99,1370	0/0:24,0:24:69.19:0,69,944	0/0:21,0:21:63.21:0,63,882	0/0:4,0:4:12.04:0,12,168
chr10	60957953	.	G	GA	14334.03	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=18.047;DP=503;FS=5.980;HRun=1;HaplotypeScore=151.0294;InbreedingCoeff=0.9882;MQ=78.59;MQ0=0;MQRankSum=-17.397;QD=43.57;ReadPosRankSum=5.693;VQSLOD=3.6556;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,5:6:15.05:221,15,0	1/1:0,6:7:18.06:285,18,0	0/0:22,0:22:63.21:0,63,872	0/0:17,0:17:48.08:0,48,618	1/1:0,22:26:68.74:1040,69,0	0/0:19,0:18:54.18:0,54,755	0/0:11,0:11:33.10:0,33,445	0/0:31,0:31:93.30:0,93,1285	1/1:0,12:16:42.14:652,42,0	1/1:0,30:30:90.28:1390,90,0	1/1:3,19:24:69.23:1048,69,0	1/1:0,11:16:45.15:674,45,0	1/1:0,15:18:48.14:720,48,0	1/1:0,10:10:30.10:474,30,0	1/1:1,23:26:72.24:1116,72,0	1/1:1,18:19:57.17:876,57,0	1/1:1,11:12:33.11:520,33,0	1/1:0,7:7:21.07:333,21,0	1/1:0,10:11:33.11:523,33,0	1/1:1,28:29:87.30:1373,87,0	1/1:3,3:6:11.69:115,12,0	0/0:29,0:29:87.27:0,87,1199	0/0:31,0:31:90.30:0,90,1257	0/0:14,0:14:42.14:0,42,587	1/1:0,11:13:36.12:556,36,0	1/1:3,21:25:75.22:1137,75,0	1/1:0,21:22:63.21:995,63,0	1/1:0,6:6:18.06:286,18,0
chr10	60957958	.	A	AGT	21656.84	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=17.532;DP=580;FS=3.951;HRun=0;HaplotypeScore=180.6736;InbreedingCoeff=0.9967;MQ=73.89;MQ0=0;MQRankSum=-18.035;QD=52.69;ReadPosRankSum=4.191;VQSLOD=4.6019;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,6:8:16.87:304,17,0	1/1:8,6:14:39.13:770,39,0	0/0:24,0:24:69.23:0,69,1077	0/0:15,0:15:42.14:0,42,670	1/1:9,22:31:81.28:1586,81,0	0/0:17,0:16:51.17:0,51,826	0/0:12,0:12:36.12:0,36,578	0/0:28,0:28:84.28:0,84,1341	1/1:9,12:21:54.13:1078,54,0	1/1:14,28:42:99:2371,120,0	1/1:4,20:24:58.41:1195,58,0	1/1:11,11:22:48.06:936,48,0	1/1:8,15:23:51.65:1024,52,0	1/1:4,10:14:42.14:832,42,0	1/1:3,24:27:78.27:1562,78,0	1/1:3,19:22:66.23:1325,66,0	1/1:2,11:13:39.13:782,39,0	1/1:3,7:10:24.06:445,24,0	1/1:7,10:17:46.67:943,47,0	1/1:6,28:34:96.26:1885,96,0	1/1:11,3:14:27.09:509,27,0	0/0:28,0:28:81.27:0,81,1298	0/0:31,0:31:93.30:0,93,1491	0/0:14,0:14:42.14:0,42,685	1/1:5,11:16:42.14:843,42,0	1/1:3,22:25:70.55:1442,71,0	1/1:5,22:27:78.23:1457,78,0	1/1:1,6:7:19.62:367,20,0
chr10	60959152	.	ACTTAGGTCCCTCTG	A	519.03	PASS	AB=0.862;AC=6;AF=0.107;AN=56;BaseQRankSum=4.383;DP=577;FS=19.009;HRun=0;HaplotypeScore=288.5566;InbreedingCoeff=-0.1214;MQ=65.67;MQ0=0;MQRankSum=-2.839;QD=5.35;ReadPosRankSum=0.477;VQSLOD=0.7560;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,1:26:75.21:0,75,5058	0/1:8,1:9:77.73:78,0,1298	0/0:14,0:14:33.23:0,33,1695	0/0:14,0:14:35.87:0,36,1569	0/0:24,1:25:48.16:0,48,3159	0/0:34,0:34:93.32:0,93,5643	0/0:22,0:22:57.15:0,57,3289	0/0:30,0:30:90.31:0,90,5637	0/0:20,0:20:54.19:0,54,3144	0/1:25,1:26:55.64:56,0,3432	0/1:14,3:17:99:175,0,2379	0/0:24,0:24:72.25:0,72,4579	0/0:25,0:25:69.24:0,69,4109	0/0:17,0:17:51.17:0,51,2361	0/0:26,0:26:72.20:0,72,4344	0/0:23,0:23:54.15:0,54,2975	0/0:14,0:14:42.14:0,42,2648	0/0:4,0:4:12.04:0,12,846	0/0:17,0:17:51.18:0,51,3122	0/1:18,3:21:99:164,0,2856	0/0:29,0:29:78.27:0,78,5022	0/1:20,2:22:50.62:51,0,2420	0/0:16,2:18:42.14:0,42,2526	0/0:10,0:10:27.09:0,27,1301	0/0:26,0:26:63.22:0,63,3741	0/0:29,1:30:78.21:0,78,4623	0/0:32,0:32:90.31:0,90,5153	0/1:1,1:2:99:122,0,127
chr10	60959695	.	TGG	T	9501.76	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=3.944;DP=481;FS=1.318;HRun=9;HaplotypeScore=104.3559;InbreedingCoeff=0.9889;MQ=76.93;MQ0=0;MQRankSum=-6.932;QD=28.20;ReadPosRankSum=5.473;VQSLOD=4.6875;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,22:27:56.99:592,57,0	1/1:0,8:8:24.03:261,24,0	0/0:19,0:18:45.94:0,46,524	0/0:18,0:19:39.13:0,39,596	1/1:1,26:27:69.19:788,69,0	0/0:5,0:22:42.42:0,42,149	0/0:3,0:11:27.95:0,28,112	0/0:10,0:26:57.07:0,57,665	1/1:3,15:18:45.12:517,45,0	1/1:4,19:23:57.14:644,57,0	1/1:2,15:17:51.09:559,51,0	1/1:3,8:11:27.05:301,27,0	1/1:3,12:15:36.10:413,36,0	1/1:3,16:19:51.04:544,51,0	1/1:4,14:18:48.12:541,48,0	1/1:1,9:10:30.07:335,30,0	1/1:5,14:19:45.11:506,45,0	1/1:2,12:14:36.09:410,36,0	1/1:3,13:16:42.10:474,42,0	1/1:8,14:22:53.99:556,54,0	1/1:2,6:7:9.02:101,9,0	0/0:3,0:15:32.78:0,33,120	0/0:3,0:20:43.81:0,44,167	0/0:3,0:12:22.16:0,22,83	1/1:3,11:14:39.05:421,39,0	1/1:1,15:16:45.12:508,45,0	1/1:6,17:23:54.15:618,54,0	1/1:0,12:12:36.10:413,36,0
chr10	60959760	.	CT	C	11153.55	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-2.070;DP=533;FS=16.760;HRun=8;HaplotypeScore=83.0657;InbreedingCoeff=0.9782;MQ=81.01;MQ0=0;MQRankSum=-8.303;QD=22.44;ReadPosRankSum=4.366;VQSLOD=3.7763;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,18:24:48.01:455,48,0	1/1:1,5:6:12.02:116,12,0	0/0:19,0:19:48.13:0,48,548	0/0:17,0:17:39.11:0,39,452	1/1:6,19:25:35.82:348,36,0	1/1:3,20:23:54.55:522,55,0	1/1:1,12:13:36.06:348,36,0	1/1:5,29:34:81.11:782,81,0	1/1:1,14:15:39.06:377,39,0	1/1:2,18:20:51.07:492,51,0	1/1:5,17:22:44.60:434,45,0	1/1:1,11:12:33.05:319,33,0	1/1:2,18:20:48.07:464,48,0	1/1:4,21:25:60.08:579,60,0	1/1:2,15:17:39.05:377,39,0	1/1:1,14:15:39.06:377,39,0	1/1:1,13:14:36.05:347,36,0	1/1:3,8:11:24.03:232,24,0	1/1:4,19:23:57.09:550,57,0	1/1:4,16:20:42.05:405,42,0	1/1:1,23:24:54.08:521,54,0	1/1:3,10:13:30:281,30,0	1/1:2,17:19:44.26:432,44,0	1/1:4,19:23:17.84:456,18,0	1/1:2,20:22:54.07:521,54,0	1/1:3,12:15:39.06:377,39,0	1/1:3,23:26:63.09:608,63,0	1/1:1,15:16:45.07:434,45,0
chr10	60960627	.	CT	C	8142.91	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=11.584;DP=504;FS=8.370;HRun=8;HaplotypeScore=58.4321;InbreedingCoeff=0.9944;MQ=82.02;MQ0=0;MQRankSum=-2.986;QD=23.53;ReadPosRankSum=5.699;VQSLOD=4.9660;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,17:20:40:452,40,0	1/1:0,8:8:18.03:174,18,0	0/0:23,0:23:51.11:0,51,600	0/0:12,0:12:26.60:0,27,319	1/1:3,20:23:54.08:521,54,0	0/0:25,0:25:72.21:0,72,860	0/0:13,0:13:33.10:0,33,399	0/0:43,0:43:99:0,105,1226	1/1:2,15:17:42.07:406,42,0	1/1:1,19:20:54.07:515,54,0	1/1:1,20:21:54.08:521,54,0	1/1:2,14:16:39.06:377,39,0	1/1:1,18:19:45.07:435,45,0	1/1:3,16:19:45.07:435,45,0	1/1:1,19:20:57.09:550,57,0	1/1:5,6:11:18.02:174,18,0	1/1:0,15:15:45.07:434,45,0	1/1:1,8:9:24.04:232,24,0	1/1:3,14:17:42.05:399,42,0	1/1:3,23:26:66.09:636,66,0	1/1:2,7:9:18.03:174,18,0	0/0:9,0:9:27.07:0,27,315	0/0:21,0:21:60.18:0,60,723	0/0:12,0:12:36.11:0,36,435	1/1:2,16:18:42.06:406,42,0	1/1:6,16:22:48.07:463,48,0	1/1:5,24:29:66.09:637,66,0	1/1:0,7:7:21.03:203,21,0
chr10	60962133	.	GA	G	12702.69	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-0.687;DP=503;FS=12.842;HRun=7;HaplotypeScore=72.5175;InbreedingCoeff=0.9178;MQ=68.94;MQ0=1;MQRankSum=-2.399;QD=26.52;ReadPosRankSum=4.445;VQSLOD=4.6104;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,15:16:45.10:459,45,0	1/1:1,7:8:18.04:184,18,0	0/0:15,0:14:20.73:0,21,313	0/0:9,0:9:22.52:0,23,200	1/1:1,23:24:63.14:643,63,0	1/1:2,22:24:57.13:582,57,0	1/1:2,7:9:21.05:214,21,0	1/1:1,27:26:75.17:765,75,0	1/1:1,15:16:39.09:398,39,0	1/1:0,25:25:75.17:764,75,0	1/1:3,28:31:78.17:796,78,0	1/1:0,17:17:48.11:490,48,0	1/1:1,13:14:33.07:337,33,0	1/1:0,13:13:36.08:367,36,0	1/1:0,15:15:42.10:429,42,0	1/1:2,16:18:42.10:429,42,0	1/1:0,22:23:66.15:672,66,0	1/1:0,14:14:36.04:356,36,0	1/1:1,13:14:39.09:398,39,0	1/1:0,30:30:87.20:888,87,0	1/1:1,5:6:12.03:122,12,0	1/1:4,14:18:42.09:429,42,0	1/1:3,20:23:22.39:544,22,0	1/1:1,4:5:9.02:92,9,0	1/1:0,22:22:66.15:673,66,0	1/1:2,20:22:60.11:603,60,0	1/1:4,34:38:96.21:979,96,0	1/1:1,5:6:9.02:92,9,0
chr10	60962708	.	C	CT	15170.23	PASS	AB=0.690;AC=27;AF=0.482;AN=56;BaseQRankSum=-12.681;DP=1076;FS=26.118;HRun=0;HaplotypeScore=159.1440;InbreedingCoeff=-0.9311;MQ=58.31;MQ0=4;MQRankSum=-2.641;QD=14.45;ReadPosRankSum=3.499;VQSLOD=3.9653;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:25,29:54:99:940,0,698	0/1:10,8:18:99:282,0,346	0/1:29,9:21:99:190,0,516	0/0:22,4:19:32.10:0,32,597	0/1:18,15:33:99:397,0,631	0/1:26,22:48:99:644,0,909	0/1:12,17:29:99:674,0,362	0/1:28,9:35:99:210,0,981	0/1:25,27:51:99:991,0,750	0/1:27,14:40:99:418,0,928	0/1:21,26:47:99:645,0,679	0/1:21,15:36:99:468,0,720	0/1:21,14:35:99:474,0,730	0/1:21,17:37:99:388,0,705	0/1:15,18:32:99:608,0,381	0/1:20,19:39:99:523,0,615	0/1:18,22:40:99:803,0,504	0/1:20,21:41:99:634,0,591	0/1:17,14:27:99:562,0,411	0/1:34,24:58:99:707,0,1148	0/1:30,21:51:99:587,0,1026	0/1:20,13:33:99:389,0,663	0/1:18,13:31:99:439,0,644	0/1:18,30:47:99:967,0,631	0/1:23,11:34:99:334,0,861	0/1:20,13:32:99:424,0,700	0/1:24,25:49:99:917,0,801	0/1:9,13:22:99:554,0,254
chr10	60962881	.	CA	C	26791.67	PASS	AB=0.722;AC=48;AF=0.857;AN=56;BaseQRankSum=11.827;DP=1225;FS=2.876;HRun=7;HaplotypeScore=126.8705;InbreedingCoeff=-0.1653;MQ=59.35;MQ0=8;MQRankSum=2.317;QD=21.87;ReadPosRankSum=4.268;VQSLOD=3.5014;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,62:63:99:1653,162,0	1/1:2,16:18:45.10:459,45,0	0/1:18,9:14:99:120,0,173	0/1:21,3:13:22.81:23,0,167	1/1:5,68:73:99:1713,168,0	0/1:25,21:46:99:483,0,738	0/1:16,16:32:99:348,0,374	0/1:34,19:44:99:247,0,925	1/1:0,43:43:99:1163,114,0	1/1:4,65:69:99:1914,189,0	1/1:1,49:50:99:1377,135,0	1/1:1,34:35:93.21:949,93,0	1/1:1,42:43:99:1224,120,0	1/1:6,36:42:99:1040,102,0	1/1:0,27:27:75.17:765,75,0	1/1:2,27:29:78.17:796,78,0	1/1:2,53:54:99:1528,150,0	1/1:1,53:53:99:1499,147,0	1/1:5,33:37:98.17:971,98,0	1/1:4,59:63:99:1584,156,0	1/1:5,20:25:54.12:550,54,0	0/1:28,22:50:99:454,0,742	0/1:22,20:42:99:462,0,637	0/1:25,20:45:99:543,0,423	1/1:0,54:54:99:1500,147,0	1/1:4,42:46:99:1255,123,0	1/1:0,56:56:99:1622,159,0	1/1:0,20:20:54.12:551,54,0
chr10	60964086	.	GAA	G	11569.94	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=13.624;DP=695;FS=3.684;HRun=9;HaplotypeScore=152.3212;InbreedingCoeff=0.9498;MQ=62.01;MQ0=1;MQRankSum=-0.481;QD=21.39;ReadPosRankSum=5.140;VQSLOD=2.5206;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:11,27:38:66.18:767,66,0	1/1:8,6:14:15.03:172,15,0	0/0:15,0:10:30.10:0,30,442	0/0:8,0:6:9.24:0,9,138	1/1:20,30:50:81.08:941,81,0	0/0:28,0:28:60.20:0,60,946	0/0:14,0:13:30.10:0,30,492	0/0:32,0:30:86.41:0,86,1256	1/1:9,12:21:30.08:350,30,0	1/1:11,34:44:96.26:1108,96,0	1/1:10,30:40:87.25:1011,87,0	1/1:7,19:26:42.11:489,42,0	1/1:6,5:11:15.04:175,15,0	1/1:7,24:31:66.18:769,66,0	1/1:3,14:17:36.10:419,36,0	1/1:4,18:22:54.16:629,54,0	1/1:8,17:25:39.10:454,39,0	1/1:2,9:11:24.07:280,24,0	1/1:12,16:28:45.11:515,45,0	1/1:15,31:46:86.45:986,86,0	1/1:3,3:6:6.02:70,6,0	0/0:16,0:16:26.58:0,27,403	0/0:24,0:24:45.14:0,45,715	0/0:15,0:15:24.07:0,24,395	1/1:6,22:28:57.16:664,57,0	1/1:11,23:34:69.18:792,69,0	1/1:14,28:42:78.22:909,78,0	1/1:4,2:5:6.01:70,6,0
chr10	60964795	.	AC	A	336.14	PASS	AB=0.700;AC=1;AF=0.018;AN=56;BaseQRankSum=6.368;DP=530;FS=5.433;HRun=1;HaplotypeScore=56.6661;InbreedingCoeff=-0.0277;MQ=99.74;MQ0=0;MQRankSum=5.987;QD=12.01;ReadPosRankSum=-3.571;VQSLOD=0.6112;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:39.10:0,39,575	0/0:6,0:6:18.06:0,18,288	0/1:16,12:28:99:410,0,628	0/0:27,2:29:0.29:0,0,1063	0/0:27,0:27:81.26:0,81,1267	0/0:35,0:35:99:0,102,1580	0/0:20,0:20:60.19:0,60,935	0/0:37,0:37:99:0,111,1668	0/0:16,0:16:48.16:0,48,762	0/0:28,0:28:84.27:0,84,1318	0/0:17,0:17:51.17:0,51,814	0/0:17,0:17:48.15:0,48,741	0/0:16,0:16:48.16:0,48,767	0/0:14,0:14:42.14:0,42,671	0/0:17,0:17:51.17:0,51,810	0/0:19,0:19:57.19:0,57,911	0/0:15,0:15:45.14:0,45,695	0/0:12,0:12:33.11:0,33,525	0/0:10,0:10:30.10:0,30,478	0/0:21,0:21:62.95:0,63,968	0/0:15,0:15:45.15:0,45,717	0/0:9,0:9:27.09:0,27,429	0/0:13,0:13:39.12:0,39,598	0/0:10,0:10:30.10:0,30,477	0/0:24,0:24:72.23:0,72,1124	0/0:19,0:19:54.17:0,54,839	0/0:33,0:33:99:0,99,1579	0/0:7,0:7:21.07:0,21,335
chr10	60966411	.	TA	T	1753.66	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-7.390;DP=456;FS=4.418;HRun=3;HaplotypeScore=91.5200;InbreedingCoeff=0.9454;MQ=76.32;MQ0=1;MQRankSum=-0.979;QD=31.32;ReadPosRankSum=0.468;VQSLOD=3.3851;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:30.95:0,31,163	0/0:12,0:12:32.10:0,32,189	0/0:19,0:15:11.07:0,11,286	0/0:17,0:11:19.35:0,19,263	0/0:26,0:26:71.88:0,72,393	1/1:0,20:20:36.12:502,36,0	1/1:0,13:13:39.13:543,39,0	0/0:37,0:37:99:0,111,1443	0/0:8,0:8:20.29:0,20,121	0/0:19,0:18:47.51:0,48,291	0/0:20,0:20:52.09:0,52,297	0/0:17,0:17:39.62:0,40,219	0/0:16,0:16:34.92:0,35,199	0/0:16,0:16:43.73:0,44,262	0/0:15,0:15:34.84:0,35,196	0/0:11,0:11:28.94:0,29,156	0/0:25,0:25:71.53:0,72,394	0/0:13,0:13:33.50:0,34,166	0/0:30,0:30:85.25:0,85,532	0/0:14,0:14:40.82:0,41,240	0/0:9,0:9:26.19:0,26,150	1/1:0,1:1:3.01:42,3,0	1/1:0,12:12:30.10:418,30,0	1/1:0,10:10:30.10:417,30,0	0/0:23,0:23:64.19:0,64,369	0/0:18,0:18:49.69:0,50,298	0/0:11,0:11:31.73:0,32,188	0/0:8,0:8:23.27:0,23,146
chr10	60966412	.	ATT	A	9846.16	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-3.746;DP=450;FS=2.651;HRun=8;HaplotypeScore=70.6490;InbreedingCoeff=0.9390;MQ=76.51;MQ0=1;MQRankSum=-1.559;QD=30.58;ReadPosRankSum=5.329;VQSLOD=4.9598;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:2,14:16:27.08:329,27,0	1/1:1,10:11:27.08:329,27,0	0/0:19,0:15:26.77:0,27,349	0/0:16,0:11:18.21:0,18,298	1/1:2,24:26:69.21:841,69,0	0/0:20,0:20:35.80:0,36,268	0/0:13,0:13:17.17:0,17,246	0/0:36,0:36:87.29:0,87,1428	1/1:1,6:7:15.05:183,15,0	1/1:1,18:18:51.08:592,51,0	1/1:2,18:20:51.16:619,51,0	1/1:1,16:17:39.12:475,39,0	1/1:1,15:16:33.10:402,33,0	1/1:3,13:16:36.11:439,36,0	1/1:1,14:15:33.10:402,33,0	1/1:0,11:11:30.09:366,30,0	1/1:3,21:24:63.19:768,63,0	1/1:0,13:13:36.11:439,36,0	1/1:1,28:29:84.24:1009,84,0	1/1:2,12:14:36.11:439,36,0	1/1:1,8:9:24.07:293,24,0	0/0:1,0:1:2.99:0,3,23	0/0:12,0:12:29.81:0,30,222	0/0:10,0:10:29.44:0,29,212	1/1:1,22:23:63.20:768,63,0	1/1:0,18:18:51.15:622,51,0	1/1:2,8:10:24.07:293,24,0	1/1:1,7:8:4.12:236,4,0
chr10	60967118	.	G	GT	12806.12	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=6.075;DP=633;FS=1.191;HRun=8;HaplotypeScore=93.3458;InbreedingCoeff=0.9860;MQ=62.60;MQ0=2;MQRankSum=-2.709;QD=27.36;ReadPosRankSum=4.419;VQSLOD=4.8660;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,24:26:57.17:658,57,0	1/1:4,10:14:27.08:312,27,0	0/0:22,0:12:29.96:0,30,262	0/0:19,0:16:36.02:0,36,329	1/1:5,35:40:99:1138,99,0	0/0:16,0:16:42.01:0,42,384	0/0:13,0:13:30.01:0,30,275	0/0:32,0:32:78.01:0,78,706	1/1:3,13:16:8.64:353,9,0	1/1:6,31:36:93.27:1070,93,0	1/1:4,27:31:81.23:923,81,0	1/1:3,14:17:39.12:448,39,0	1/1:3,19:22:54.16:623,54,0	1/1:2,16:18:48.14:554,48,0	1/1:5,10:15:27.08:312,27,0	1/1:2,16:18:48.14:554,48,0	1/1:2,18:21:60:664,60,0	1/1:3,10:13:24.07:277,24,0	1/1:2,23:24:66.19:759,66,0	1/1:5,32:37:93.23:1057,93,0	1/1:1,7:8:15.04:173,15,0	0/0:24,0:24:60.03:0,60,549	0/0:25,0:25:69.04:0,69,631	0/0:14,0:14:39:0,39,352	1/1:1,24:25:57.17:658,57,0	1/1:4,36:40:99:1166,102,0	1/1:2,23:25:60.18:692,60,0	1/1:4,16:20:36.11:415,36,0
chr10	60968248	.	ATGTGTG	A	3657.07	PASS	AB=0.797;AC=26;AF=0.520;AN=50;BaseQRankSum=0.576;DP=620;FS=0.000;HRun=0;HaplotypeScore=138.1186;InbreedingCoeff=0.5400;MQ=51.48;MQ0=23;MQRankSum=5.162;QD=13.54;ReadPosRankSum=6.820;VQSLOD=1.9920;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,0:35:15.01:200,15,0	1/1:7,0:7:12.03:215,12,0	0/0:37,0:14:17.91:0,18,268	0/0:37,0:14:12.50:0,13,256	0/0:17,0:30:5.99:0,6,50	0/0:33,0:30:12.29:0,12,209	0/0:23,0:22:5.71:0,6,117	0/0:37,0:36:71.54:0,72,1124	0/1:19,0:19:22.32:173,0,22	1/1:8,12:19:30.13:648,30,0	./.	1/1:10,13:23:6:69,6,0	0/1:7,14:21:42.52:201,0,43	1/1:10,11:21:3.01:52,3,0	./.	1/1:21,3:26:26.39:791,26,0	0/1:17,0:15:4.49:144,0,4	1/1:4,0:3:5.98:46,6,0	1/1:9,8:16:23.74:408,24,0	0/1:6,13:19:0.31:1,0,0	./.	0/0:25,0:25:24.05:0,24,439	0/0:23,0:20:2.52:0,3,73	0/0:15,0:21:3:0,3,25	0/0:6,10:16:3:0,3,25	1/1:20,0:21:19.20:327,19,0	1/1:10,2:14:16.88:304,17,0	1/1:4,0:2:6:77,6,0
chr10	60970381	.	GAC	G	506.06	PASS	AB=1.000;AC=27;AF=0.844;AN=32;BaseQRankSum=-1.733;DP=373;FS=3.832;HRun=0;HaplotypeScore=72.3119;InbreedingCoeff=0.2643;MQ=77.68;MQ0=8;MQRankSum=1.016;QD=2.54;ReadPosRankSum=-1.733;VQSLOD=0.8651;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	./.	1/1:13,0:19:14.20:70,14,0	./.	./.	1/1:14,0:16:2.84:14,3,0	./.	1/1:4,1:5:3.01:32,3,0	1/1:7,0:9:2.84:14,3,0	0/1:10,0:10:0:0,0,0	1/1:13,0:14:4.80:28,5,0	1/1:14,1:16:8.69:59,9,0	1/1:13,1:16:6.32:46,6,0	1/1:14,2:16:2.62:31,3,0	0/0:16,0:16:0.47:0,0,1	./.	1/1:4,2:7:8.86:78,9,0	1/1:19,4:23:9.02:95,9,0	1/1:8,0:12:2.84:14,3,0	./.	1/1:15,0:19:2.84:14,3,0	./.	./.	1/1:11,3:16:11.70:91,12,0	0/0:5,0:5:2.60:0,3,10
chr10	60970432	.	A	ATG	8785	PASS	AB=1.000;AC=47;AF=0.870;AN=54;BaseQRankSum=-3.396;DP=465;FS=39.923;HRun=0;HaplotypeScore=79.7137;InbreedingCoeff=0.5712;MQ=63.16;MQ0=16;MQRankSum=0.276;QD=23.00;ReadPosRankSum=4.621;VQSLOD=3.2820;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,29:32:3.01:35,3,0	1/1:7,0:7:18.04:269,18,0	0/0:20,0:10:30.10:0,30,460	0/0:38,0:21:51:0,51,874	./.	0/1:19,0:18:5.15:5,0,29	0/0:14,0:14:8.79:0,9,30	1/1:19,0:17:1.29:54,1,0	1/1:12,0:12:33.09:514,33,0	1/1:0,10:10:27.09:420,27,0	1/1:2,10:13:3.01:36,3,0	1/1:20,0:19:48.10:694,48,0	1/1:0,12:12:3.01:35,3,0	1/1:21,0:21:60.20:948,60,0	1/1:16,0:16:39.04:533,39,0	1/1:14,0:14:36.06:536,36,0	1/1:21,0:20:36.09:681,36,0	1/1:14,0:14:28.92:443,29,0	1/1:3,13:15:38.12:578,38,0	1/1:13,0:12:30.07:439,30,0	1/1:34,0:33:78.69:1192,79,0	1/1:14,0:14:12.30:41,12,0	1/1:11,0:11:0.91:10,1,0	1/1:22,0:20:3.82:19,4,0	1/1:18,0:18:39.60:646,40,0	1/1:0,6:9:26.64:340,27,0	1/1:12,0:11:23.30:269,23,0	1/1:2,0:2:3.01:50,3,0
chr10	60971246	.	TA	T	12821.30	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=11.396;DP=539;FS=7.509;HRun=3;HaplotypeScore=61.5418;InbreedingCoeff=0.9893;MQ=78.81;MQ0=0;MQRankSum=-7.481;QD=32.30;ReadPosRankSum=6.439;VQSLOD=4.5534;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,16:17:36.11:446,36,0	1/1:0,5:5:12.04:149,12,0	0/0:18,0:18:54.15:0,54,749	0/0:27,0:25:72.20:0,72,993	1/1:0,12:12:33.10:409,33,0	0/0:25,0:25:69.22:0,69,977	0/0:8,0:8:21.07:0,21,301	0/0:25,0:25:72.23:0,72,1020	1/1:1,27:28:75.24:929,75,0	1/1:0,18:18:54.16:655,54,0	1/1:0,7:7:15.05:186,15,0	1/1:1,24:25:66.21:818,66,0	1/1:1,28:29:78.24:967,78,0	1/1:2,22:24:54.14:669,54,0	1/1:0,26:26:66.21:818,66,0	1/1:0,19:19:48.15:595,48,0	1/1:2,24:26:66.21:818,66,0	1/1:2,12:13:30.09:372,30,0	1/1:1,19:20:57.15:691,57,0	1/1:0,16:16:45.14:558,45,0	1/1:0,35:35:90.28:1116,90,0	0/0:7,0:7:21.07:0,21,302	0/0:12,0:11:30.10:0,30,432	0/0:20,0:20:60.20:0,60,864	1/1:0,18:18:54.17:669,54,0	1/1:0,28:28:84.25:1029,84,0	1/1:0,24:24:57.18:706,57,0	1/1:0,6:6:18.06:223,18,0
chr10	60971433	.	C	CTATGTGT	287.17	PASS	AC=12;AF=0.400;AN=30;BaseQRankSum=3.062;DP=242;FS=14.296;HRun=0;HaplotypeScore=55.0551;InbreedingCoeff=0.5658;MQ=78.32;MQ0=24;MQRankSum=-1.448;QD=12.49;ReadPosRankSum=-0.041;VQSLOD=0.0474;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:2,0:4:0:0,0,0	./.	0/0:49,0:7:7.82:0,8,122	0/0:91,0:26:10.66:0,11,469	./.	0/0:5,0:10:24.07:0,24,509	0/0:1,0:3:9.03:0,9,155	0/0:23,0:27:78.53:0,79,1886	./.	1/1:0,0:3:4.26:109,4,0	./.	./.	./.	./.	./.	./.	1/1:4,5:9:2.04:6,2,0	1/1:5,0:5:4.21:88,4,0	1/1:1,0:2:3.90:80,4,0	./.	./.	0/0:1,0:1:3.01:0,3,82	0/0:3,0:5:12.03:0,12,217	0/0:2,0:2:6.02:0,6,152	./.	1/1:1,0:2:3.01:77,3,0	./.	1/1:0,0:2:3.01:41,3,0
chr10	60972728	.	ATT	A	11386.35	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=11.465;DP=542;FS=2.976;HRun=9;HaplotypeScore=104.4317;InbreedingCoeff=0.9970;MQ=72.08;MQ0=1;MQRankSum=-5.299;QD=28.18;ReadPosRankSum=3.551;VQSLOD=4.9518;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,21:23:56.71:660,57,0	1/1:0,7:7:21.06:245,21,0	0/0:16,0:14:29.96:0,30,400	0/0:17,0:15:26.69:0,27,279	1/1:2,39:41:87.10:968,87,0	0/0:14,0:14:30.10:0,30,492	0/0:9,0:10:20.56:0,21,304	0/0:30,0:30:75.24:0,75,1189	1/1:3,13:16:39.11:454,39,0	1/1:3,23:26:69.19:792,69,0	1/1:3,15:18:45.13:524,45,0	1/1:3,13:16:33.09:384,33,0	1/1:3,18:21:51.14:594,51,0	1/1:1,24:25:72.21:838,72,0	1/1:1,19:20:57.17:664,57,0	1/1:2,17:19:48.13:559,48,0	1/1:1,17:18:36.06:404,36,0	1/1:1,13:14:33.06:369,33,0	1/1:5,15:20:45.08:510,45,0	1/1:1,18:19:48.13:559,48,0	1/1:2,9:11:24.07:280,24,0	0/0:22,0:22:63.22:0,63,1034	0/0:21,0:21:60.20:0,60,962	0/0:8,0:8:21.07:0,21,345	1/1:2,21:23:54.12:614,54,0	1/1:2,19:21:57.17:664,57,0	1/1:3,26:29:71.80:814,72,0	1/1:3,14:17:42.11:489,42,0
chr10	60974188	.	C	CT	18514.82	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=3.038;DP=606;FS=0.000;HRun=0;HaplotypeScore=80.5102;InbreedingCoeff=0.9966;MQ=78.39;MQ0=0;MQRankSum=-4.926;QD=42.27;ReadPosRankSum=8.202;VQSLOD=4.0214;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,19:19:42.14:642,42,0	1/1:0,16:16:45.15:689,45,0	0/0:28,0:28:69.65:0,70,991	0/0:23,0:21:53.83:0,54,640	1/1:0,42:42:99:1853,123,0	0/0:18,0:18:54.11:0,54,711	0/0:19,0:19:57.17:0,57,765	0/0:31,0:31:93.24:0,93,1219	1/1:0,26:26:72.24:1102,72,0	1/1:0,27:27:81.23:1208,81,0	1/1:0,29:29:81.28:1240,81,0	1/1:0,22:22:54.18:827,54,0	1/1:0,19:19:54.18:826,54,0	1/1:1,15:16:28.17:625,28,0	1/1:0,21:21:57.19:873,57,0	1/1:0,13:13:30.06:459,30,0	1/1:0,24:24:72.24:1101,72,0	1/1:2,8:10:27.05:386,27,0	1/1:0,20:20:60.20:918,60,0	1/1:0,39:39:99:1634,114,0	1/1:0,8:8:24.08:367,24,0	0/0:17,0:17:48.12:0,48,619	0/0:21,0:21:63.17:0,63,828	0/0:11,0:11:33.05:0,33,421	1/1:0,17:17:48.16:735,48,0	1/1:0,34:34:99:1561,102,0	1/1:1,30:30:81.28:1240,81,0	1/1:0,5:5:15.05:229,15,0
chr10	60977820	.	C	CA	1446.83	PASS	AB=0.908;AC=14;AF=0.250;AN=56;BaseQRankSum=-9.483;DP=540;FS=19.614;HRun=10;HaplotypeScore=141.9385;InbreedingCoeff=0.3582;MQ=55.31;MQ0=9;MQRankSum=3.817;QD=7.66;ReadPosRankSum=1.077;VQSLOD=0.5119;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:16,0:16:21.86:22,0,50	0/0:8,0:8:15.78:0,16,80	0/1:17,0:9:12.16:12,0,41	0/0:24,0:13:3.56:0,4,141	0/1:23,0:23:13.21:13,0,144	1/1:2,19:21:26.48:487,26,0	0/1:6,7:14:10.45:140,0,10	0/0:6,0:28:39.04:0,39,113	0/0:12,0:12:20.05:0,20,114	0/0:34,0:35:31.74:0,32,297	0/0:25,0:25:34.07:0,34,262	0/0:15,0:15:23.10:0,23,132	0/0:22,0:22:27.05:0,27,151	0/0:16,0:16:14.73:0,15,159	0/1:18,2:20:14.24:14,0,202	0/0:15,0:15:17.25:0,17,99	0/0:15,0:15:4.62:0,5,94	0/0:13,0:13:18.89:0,19,99	0/0:18,0:18:44.33:0,44,227	0/0:30,0:30:50.74:0,51,301	0/0:12,0:12:0.41:0,0,75	1/1:3,12:15:36.09:384,36,0	1/1:1,16:18:38.93:398,39,0	1/1:4,4:8:9.02:96,9,0	0/0:16,0:16:29.64:0,30,163	0/1:32,3:35:53.20:53,0,237	0/0:33,0:33:46.31:0,46,334	0/0:14,0:14:19.94:0,20,107
chr10	60977845	.	T	TAACAAC	22815.05	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-3.148;DP=576;FS=4.042;HRun=0;HaplotypeScore=122.9840;InbreedingCoeff=0.9609;MQ=56.84;MQ0=0;MQRankSum=-11.118;QD=52.81;ReadPosRankSum=4.164;VQSLOD=4.7640;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,12:20:17.91:436,18,0	1/1:2,5:9:14.98:419,15,0	0/0:12,0:11:16.75:0,17,236	0/0:23,0:18:24.79:0,25,428	1/1:3,18:24:39.05:1081,39,0	0/0:19,0:19:42.09:0,42,776	0/0:14,0:14:30.07:0,30,571	0/0:34,0:34:57.14:0,57,970	1/1:2,10:13:9.03:301,9,0	1/1:7,33:46:99:2791,99,0	1/1:6,17:24:51.09:1428,51,0	1/1:1,13:16:30.10:1002,30,0	1/1:3,22:27:45.15:1502,45,0	1/1:1,13:15:30.10:1000,30,0	1/1:4,18:28:42.14:1391,42,0	1/1:2,12:17:18.06:602,18,0	1/1:3,11:16:26.49:700,26,0	1/1:2,5:8:12.93:404,13,0	1/1:8,13:24:44.65:1180,45,0	1/1:4,28:37:75.12:2248,75,0	1/1:5,6:12:9.03:301,9,0	0/0:15,0:15:36.10:0,36,689	0/0:21,0:21:54.14:0,54,1038	0/0:6,0:6:12.04:0,12,243	1/1:3,17:24:42.14:1404,42,0	1/1:8,20:29:69.14:2050,69,0	1/1:9,23:35:62.41:2073,62,0	1/1:2,5:7:15.05:502,15,0
chr10	60982208	.	GA	G	394.71	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=0.362;DP=635;FS=2.081;HRun=7;HaplotypeScore=78.2913;InbreedingCoeff=0.9969;MQ=56.83;MQ0=5;MQRankSum=-2.342;QD=15.79;ReadPosRankSum=-4.471;VQSLOD=2.9239;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:78.21:0,78,951	0/0:17,0:17:48.03:0,48,550	0/0:21,0:19:42.56:0,43,503	0/0:17,0:12:27.08:0,27,324	0/0:27,0:27:33.09:0,33,415	0/0:28,0:28:72.23:0,72,905	0/0:12,0:12:33.11:0,33,414	1/1:3,22:19:48.10:490,48,0	0/0:18,0:18:51.16:0,51,642	0/0:31,0:31:90.28:0,90,1122	0/0:19,0:19:33.06:0,33,397	0/0:19,0:19:51.16:0,51,640	0/0:35,0:34:81.25:0,81,1016	0/0:20,0:20:57.14:0,57,697	0/0:20,0:20:48.14:0,48,594	0/0:15,0:15:36.07:0,36,435	0/0:28,0:28:59.79:0,60,945	0/0:22,0:21:51.08:0,51,606	0/0:29,0:27:75.23:0,75,931	0/0:30,0:30:66.17:0,66,812	0/0:11,0:11:27.09:0,27,340	0/0:24,0:24:60.19:0,60,755	0/0:22,0:22:57.17:0,57,704	0/0:13,0:13:36.12:0,36,453	0/0:23,0:23:63.13:0,63,757	0/0:20,0:19:57.18:0,57,717	0/0:40,0:40:99:0,99,1245	0/0:19,0:19:48.15:0,48,604
chr10	60983068	.	A	AG	3530.49	PASS	AB=0.778;AC=49;AF=0.980;AN=50;BaseQRankSum=-1.488;DP=173;FS=0.000;HRun=1;HaplotypeScore=21.3059;InbreedingCoeff=-0.0910;MQ=45.03;MQ0=4;MQRankSum=-1.732;QD=21.14;ReadPosRankSum=1.365;VQSLOD=3.5419;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,6:7:6.02:90,6,0	1/1:0,2:2:5.95:63,6,0	1/1:1,7:6:15.05:221,15,0	0/1:5,2:4:15.89:39,0,16	1/1:2,3:4:3.01:45,3,0	1/1:1,9:4:3.01:45,3,0	1/1:0,17:11:24.08:359,24,0	1/1:1,8:7:21.05:293,21,0	1/1:2,10:8:12.04:179,12,0	1/1:1,4:5:12.04:179,12,0	./.	1/1:0,7:5:9.03:134,9,0	1/1:0,7:4:12.04:179,12,0	1/1:0,5:5:9.03:134,9,0	1/1:1,7:7:15.05:224,15,0	1/1:1,4:4:8.94:85,9,0	1/1:2,3:4:6.02:90,6,0	1/1:0,3:2:6.02:90,6,0	1/1:0,5:5:15.05:225,15,0	1/1:1,6:5:15.05:217,15,0	1/1:1,4:4:3.01:45,3,0	./.	1/1:1,1:2:3.01:45,3,0	1/1:0,6:5:9.50:135,10,0	./.	1/1:0,7:3:9.03:135,9,0	1/1:0,10:7:20.86:189,21,0	1/1:0,2:2:6.02:90,6,0
chr10	60983167	.	A	AG	598.66	PASS	AC=14;AF=0.875;AN=16;BaseQRankSum=-1.302;DP=116;FS=0.000;HRun=0;HaplotypeScore=3.8017;MQ=33.15;MQ0=18;MQRankSum=-1.735;QD=16.18;ReadPosRankSum=0.651;VQSLOD=4.1934;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,2:4:3.01:44,3,0	./.	0/0:3,0:1:2.97:0,3,20	./.	./.	1/1:1,3:1:3.01:44,3,0	./.	1/1:2,5:5:15.05:224,15,0	./.	1/1:1,5:2:6.02:96,6,0	./.	1/1:0,1:1:3.01:47,3,0	./.	./.	./.	./.	./.	./.	1/1:0,5:3:3.01:48,3,0	./.	./.	./.	./.	./.	./.	1/1:1,8:4:12.04:175,12,0	./.	./.
chr10	60983396	.	A	AG	3540.11	PASS	AB=0.769;AC=43;AF=0.896;AN=48;BaseQRankSum=-2.871;DP=163;FS=3.515;HRun=0;HaplotypeScore=18.0878;InbreedingCoeff=0.2840;MQ=37.48;MQ0=7;MQRankSum=-1.676;QD=24.58;ReadPosRankSum=4.165;VQSLOD=4.5328;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,3:2:6.02:96,6,0	./.	0/0:7,0:2:3.01:0,3,39	0/0:7,0:1:3:0,3,26	1/1:1,12:12:18.06:286,18,0	1/1:1,12:10:18.06:286,18,0	1/1:0,7:7:15.05:239,15,0	0/1:7,3:10:73.76:165,0,74	1/1:0,6:4:12.04:191,12,0	1/1:1,6:4:12.04:191,12,0	1/1:3,3:5:6.02:95,6,0	1/1:0,7:7:18.06:286,18,0	1/1:1,6:5:9.03:143,9,0	1/1:1,7:5:6.02:95,6,0	1/1:2,7:6:12.04:191,12,0	1/1:0,4:3:6.02:95,6,0	./.	./.	1/1:0,5:3:9.03:143,9,0	1/1:2,3:5:3.01:48,3,0	./.	1/1:3,6:6:15.05:225,15,0	1/1:2,3:5:6.02:94,6,0	1/1:1,4:2:6.02:95,6,0	1/1:0,2:2:6.02:96,6,0	1/1:0,5:5:12.04:192,12,0	1/1:0,6:6:12.04:191,12,0	1/1:0,2:2:6.02:96,6,0
chr10	60983555	.	G	GT	1732.25	PASS	AC=12;AF=0.750;AN=16;BaseQRankSum=-4.222;DP=151;FS=5.246;HRun=1;HaplotypeScore=74.7015;MQ=83.81;MQ0=4;MQRankSum=-4.058;QD=18.83;ReadPosRankSum=1.846;VQSLOD=3.9736;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:24,1:8:8.66:0,9,93	0/0:31,1:14:13.35:0,13,73	./.	1/1:11,3:14:29.78:266,30,0	1/1:12,1:12:32.39:237,32,0	1/1:2,17:13:30.09:425,30,0	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	1/1:10,2:10:26.29:215,26,0	1/1:20,3:21:58.02:509,58,0	1/1:9,2:10:8.95:180,9,0	./.	./.	./.	./.
chr10	60983599	.	TG	T	269.55	PASS	AB=0.786;AC=14;AF=0.875;AN=16;BaseQRankSum=-1.681;DP=71;FS=5.990;HRun=2;HaplotypeScore=77.5047;MQ=122.89;MQ0=8;MQRankSum=-2.283;QD=4.28;ReadPosRankSum=2.319;VQSLOD=0.7645;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/1:6,2:6:44.84:57,0,45	0/1:17,5:17:62.53:63,0,121	./.	1/1:2,4:5:3.85:12,4,0	1/1:0,4:4:9.97:59,10,0	1/1:3,0:3:6:62,6,0	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	1/1:1,3:4:5.45:16,5,0	1/1:2,5:6:10.02:59,10,0	1/1:1,6:7:8.56:26,9,0	./.	./.	./.	./.
chr10	60983604	.	C	CT	357.29	PASS	AB=0.870;AC=14;AF=0.875;AN=16;BaseQRankSum=0.000;DP=61;FS=1.547;HRun=0;HaplotypeScore=62.5267;MQ=139.57;MQ0=5;MQRankSum=-2.302;QD=6.87;ReadPosRankSum=2.923;VQSLOD=3.1800;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/1:9,2:8:67.44:67,0,94	0/1:15,2:16:22.14:76,0,22	./.	1/1:0,5:4:5.72:29,6,0	1/1:1,3:4:11.65:66,12,0	./.	./.	./.	./.	./.	./.	./.	./.	1/1:0,1:1:3.01:38,3,0	./.	./.	./.	./.	./.	1/1:0,3:3:8.52:42,9,0	1/1:0,5:4:11.32:55,11,0	1/1:0,6:6:14.10:69,14,0	./.	./.	./.	./.
chr10	60984773	.	CA	C	10574.02	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=13.632;DP=565;FS=0.367;HRun=7;HaplotypeScore=121.7532;InbreedingCoeff=0.9978;MQ=68.11;MQ0=2;MQRankSum=-0.187;QD=25.42;ReadPosRankSum=3.511;VQSLOD=3.8251;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,37:39:99:1071,105,0	1/1:0,10:10:30.07:306,30,0	0/0:13,0:10:24.07:0,24,278	0/0:13,0:11:26.24:0,26,240	1/1:4,31:35:81.02:826,81,0	0/0:26,0:26:72.23:0,72,905	0/0:18,0:18:51.16:0,51,641	0/0:30,0:30:90.29:0,90,1132	1/1:3,18:21:48.11:490,48,0	1/1:3,17:21:54.11:544,54,0	1/1:2,15:17:39.09:397,39,0	1/1:3,23:26:63.14:643,63,0	1/1:5,26:31:75.15:758,75,0	1/1:1,21:22:60.14:612,60,0	1/1:0,14:14:36.08:367,36,0	1/1:1,6:7:18.04:184,18,0	1/1:2,14:16:39.09:398,39,0	1/1:1,10:11:30.07:306,30,0	1/1:1,17:17:51.12:520,51,0	1/1:4,27:31:66.14:673,66,0	1/1:4,14:18:42.09:429,42,0	0/0:22,0:22:63.20:0,63,792	0/0:16,0:16:42.13:0,42,527	0/0:10,0:10:30.08:0,30,364	1/1:4,14:18:42.09:429,42,0	1/1:4,23:26:66.15:673,66,0	1/1:1,20:21:54.12:551,54,0	1/1:0,13:13:39.09:398,39,0
chr10	60986503	.	G	GA	2071.49	PASS	AB=0.667;AC=39;AF=0.929;AN=42;BaseQRankSum=2.014;DP=103;FS=11.099;HRun=2;HaplotypeScore=63.7612;InbreedingCoeff=0.1062;MQ=41.75;MQ0=25;MQRankSum=-2.159;QD=25.57;ReadPosRankSum=0.461;VQSLOD=2.0742;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,4:5:12.04:182,12,0	./.	0/0:15,0:2:3.01:0,3,42	./.	1/1:0,2:1:3.01:48,3,0	1/1:2,3:4:9.03:143,9,0	./.	1/1:2,1:1:3.01:48,3,0	1/1:0,5:3:9.03:143,9,0	./.	1/1:2,3:5:6.02:95,6,0	1/1:3,2:4:12.04:177,12,0	1/1:1,1:2:6.02:83,6,0	./.	1/1:3,1:2:6.02:82,6,0	1/1:2,2:3:9.03:117,9,0	1/1:2,1:2:6.02:82,6,0	0/1:2,2:2:1.08:43,0,1	1/1:2,0:1:2.98:21,3,0	1/1:2,2:3:6.02:82,6,0	./.	./.	1/1:1,2:2:3.01:48,3,0	1/1:2,3:3:9.03:143,9,0	1/1:3,4:6:18.06:273,18,0	1/1:0,1:1:3.01:48,3,0	1/1:3,7:7:18.06:256,18,0	1/1:0,1:1:3.01:48,3,0
chr10	60987717	.	A	AC	474.61	PASS	AC=12;AF=0.857;AN=14;BaseQRankSum=-2.293;DP=80;FS=19.590;HRun=1;HaplotypeScore=6.9264;MQ=48.87;MQ0=4;MQRankSum=-2.293;QD=18.25;ReadPosRankSum=0.425;VQSLOD=1.7667;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:3,0:1:6.02:0,6,69	./.	./.	./.	./.	./.	./.	1/1:1,4:5:12.04:180,12,0	./.	./.	./.	./.	1/1:2,0:2:3:25,3,0	./.	./.	./.	1/1:1,5:4:12.04:179,12,0	./.	./.	./.	./.	./.	./.	1/1:0,3:3:3.01:45,3,0	1/1:0,9:9:6.02:82,6,0	1/1:0,1:1:3.01:45,3,0
chr10	60988249	.	G	GT	11635.11	PASS	AB=1.000;AC=41;AF=0.732;AN=56;BaseQRankSum=-11.219;DP=503;FS=1.311;HRun=7;HaplotypeScore=47.2281;InbreedingCoeff=0.8935;MQ=61.20;MQ0=0;MQRankSum=2.714;QD=29.61;ReadPosRankSum=4.552;VQSLOD=4.9756;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,16:20:48.13:566,48,0	1/1:1,7:8:21.06:254,21,0	0/0:17,0:14:11.22:0,11,341	0/1:14,0:14:31.26:31,0,225	1/1:3,30:33:90.28:1087,90,0	0/0:13,0:13:36.06:0,36,347	0/0:16,0:16:42.02:0,42,392	0/0:25,0:25:66.10:0,66,637	1/1:2,13:15:33.10:399,33,0	1/1:3,23:27:72.09:846,72,0	1/1:2,32:34:93.24:1107,93,0	1/1:0,5:5:15.05:181,15,0	1/1:2,15:17:39.12:471,39,0	1/1:4,18:22:51.16:616,51,0	1/1:1,14:15:39.12:471,39,0	1/1:2,6:8:18.06:217,18,0	1/1:3,19:22:56.66:662,57,0	1/1:2,22:24:63.19:761,63,0	1/1:2,20:22:60.16:706,60,0	1/1:0,25:25:75.23:905,75,0	1/1:0,6:6:15.05:181,15,0	0/0:15,0:15:36.04:0,36,343	0/0:17,0:17:51.08:0,51,492	0/0:7,0:7:21.03:0,21,203	1/1:0,16:16:48.15:580,48,0	1/1:7,17:22:51.16:614,51,0	1/1:2,20:22:60.18:725,60,0	1/1:5,7:12:21.06:254,21,0
chr10	60990143	.	T	TG	12870.16	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-11.878;DP=436;FS=5.665;HRun=1;HaplotypeScore=39.4155;InbreedingCoeff=0.9865;MQ=81.54;MQ0=0;MQRankSum=-4.667;QD=41.65;ReadPosRankSum=4.158;VQSLOD=4.7707;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,17:17:45.15:674,45,0	1/1:0,5:5:15.05:225,15,0	0/0:13,0:13:39.08:0,39,461	0/0:16,0:16:39.35:0,39,493	1/1:2,26:28:75.25:1123,75,0	0/0:14,0:14:42.14:0,42,545	0/0:12,0:12:36.12:0,36,468	0/0:33,0:33:87.28:0,87,1129	1/1:0,8:8:24.08:360,24,0	1/1:2,17:18:54.18:805,54,0	1/1:1,27:28:81.27:1213,81,0	1/1:0,11:11:30.10:449,30,0	1/1:0,13:13:33.11:495,33,0	1/1:1,11:12:33.11:493,33,0	1/1:0,18:18:51.17:765,51,0	1/1:0,11:11:29.98:450,30,0	1/1:0,15:15:39.13:582,39,0	1/1:0,9:9:24.08:360,24,0	1/1:1,15:16:45.15:671,45,0	1/1:0,27:27:81.27:1213,81,0	1/1:0,10:10:30.10:450,30,0	0/0:11,0:11:33.11:0,33,429	0/0:18,0:18:51.17:0,51,661	0/0:10,0:10:30.08:0,30,374	1/1:0,17:17:45.15:675,45,0	1/1:0,18:18:54.18:790,54,0	1/1:1,22:23:63.21:944,63,0	1/1:0,4:4:9.03:135,9,0
chr10	60990259	.	A	AT	14998.63	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-12.399;DP=462;FS=2.539;HRun=2;HaplotypeScore=40.1094;InbreedingCoeff=0.9788;MQ=74.64;MQ0=0;MQRankSum=-2.744;QD=43.73;ReadPosRankSum=6.510;VQSLOD=3.5759;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,11:11:24.08:383,24,0	1/1:0,10:10:30.10:479,30,0	0/0:12,0:12:33.11:0,33,450	0/0:17,0:17:42.14:0,42,572	1/1:1,30:31:87.23:1349,87,0	0/0:17,0:17:51.16:0,51,695	0/0:3,0:3:9.03:0,9,125	0/0:40,0:40:99:0,120,1620	1/1:0,11:11:33.11:527,33,0	1/1:0,24:24:72.23:1118,72,0	1/1:0,29:29:84.29:1342,84,0	1/1:0,12:12:33.11:528,33,0	1/1:1,11:12:30.10:479,30,0	1/1:0,12:12:33.11:526,33,0	1/1:0,16:16:48.16:767,48,0	1/1:0,19:19:54.18:863,54,0	1/1:1,16:17:43.70:674,44,0	1/1:0,11:11:24.08:383,24,0	1/1:1,20:22:60.18:930,60,0	1/1:0,22:22:63.21:1007,63,0	1/1:1,14:15:33.11:527,33,0	0/0:11,0:11:33.11:0,33,461	0/0:15,0:15:45.15:0,45,629	0/0:4,0:4:12.04:0,12,168	1/1:1,14:15:39.13:623,39,0	1/1:0,19:19:57.19:910,57,0	1/1:0,30:30:87.30:1390,87,0	1/1:0,5:5:12.04:192,12,0
chr10	60991257	.	T	TA	14391.84	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-3.626;DP=516;FS=6.899;HRun=4;HaplotypeScore=57.4188;InbreedingCoeff=0.9533;MQ=62.78;MQ0=1;MQRankSum=-2.190;QD=36.25;ReadPosRankSum=1.991;VQSLOD=5.2154;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,15:15:42.14:574,42,0	1/1:1,13:14:36.12:492,36,0	0/0:8,0:5:3:0,3,34	0/0:13,0:9:26.75:0,27,259	1/1:2,25:27:75.18:1002,75,0	0/0:22,0:22:63.16:0,63,705	0/0:9,0:9:21.06:0,21,238	0/0:34,0:34:81.22:0,81,912	1/1:3,15:18:45.15:616,45,0	1/1:4,20:24:60.19:806,60,0	1/1:0,30:30:87.22:1163,87,0	1/1:1,11:12:33.11:451,33,0	1/1:1,23:24:66.22:903,66,0	1/1:2,18:20:51.17:697,51,0	1/1:0,17:17:42.14:575,42,0	1/1:0,19:19:54.18:739,54,0	1/1:1,15:16:45.15:615,45,0	1/1:1,9:10:27.09:364,27,0	1/1:0,17:17:51.15:679,51,0	1/1:2,25:27:72.16:944,72,0	1/1:2,5:7:12.04:164,12,0	0/0:8,0:8:21.06:0,21,238	0/0:20,0:20:60.17:0,60,681	0/0:5,0:5:9.02:0,9,102	1/1:0,22:22:63.21:862,63,0	1/1:0,21:21:63.21:862,63,0	1/1:3,39:42:99:1433,105,0	1/1:0,15:13:33.05:451,33,0
chr10	60992697	.	CA	C	10177.06	PASS	AB=0.909;AC=53;AF=0.946;AN=56;BaseQRankSum=-1.321;DP=506;FS=1.449;HRun=9;HaplotypeScore=92.8919;InbreedingCoeff=0.5758;MQ=71.82;MQ0=0;MQRankSum=-3.663;QD=20.64;ReadPosRankSum=3.748;VQSLOD=5.1608;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,11:11:33.02:302,33,0	1/1:0,5:5:12.01:110,12,0	0/0:13,0:12:14.99:0,15,147	0/1:9,1:9:27.98:28,0,68	1/1:3,27:30:78:714,78,0	1/1:1,0:17:32.59:96,33,0	1/1:1,0:7:8.15:24,8,0	1/1:6,20:26:57.03:522,57,0	1/1:0,17:17:48.03:439,48,0	1/1:0,32:32:96.01:869,96,0	1/1:5,25:30:78.01:709,78,0	1/1:1,17:18:45.02:412,45,0	1/1:3,22:25:63.03:576,63,0	1/1:0,13:13:36.02:329,36,0	1/1:1,17:18:51.03:467,51,0	1/1:2,16:18:45.01:412,45,0	1/1:1,12:13:32.96:294,33,0	1/1:1,9:11:23.84:206,24,0	1/1:2,13:15:39:357,39,0	1/1:3,24:27:75.01:682,75,0	1/1:0,9:9:27.01:247,27,0	1/1:1,0:16:28.52:84,29,0	1/1:2,0:30:55:162,55,0	1/1:1,0:9:14.26:42,14,0	1/1:0,13:13:36.02:329,36,0	1/1:0,26:26:78.01:702,78,0	1/1:3,33:36:99:928,102,0	1/1:0,11:11:15.01:137,15,0
chr10	60994241	.	G	GAGATATATATA	1097.28	PASS	AB=1.000;AC=25;AF=0.446;AN=56;BaseQRankSum=0.722;DP=103;FS=2.113;HRun=0;HaplotypeScore=29.8644;InbreedingCoeff=0.2018;MQ=75.53;MQ0=3;MQRankSum=1.719;QD=16.63;ReadPosRankSum=-3.485;VQSLOD=0.7198;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:2,0:2:5.68:0,6,28	1/1:1,0:1:3:25,3,0	0/0:2,0:1:3.01:0,3,36	0/0:9,0:5:6.93:0,7,44	0/1:4,0:4:14.77:36,0,15	0/0:2,0:2:6.01:0,6,88	0/0:4,0:4:12:0,12,138	0/0:6,0:6:12.03:0,12,224	1/1:2,0:2:5.99:50,6,0	0/1:5,0:5:4.99:71,0,5	0/1:7,0:7:8.77:82,0,9	1/1:3,0:3:8.99:75,9,0	0/1:5,0:5:11.77:60,0,12	0/0:2,0:2:2.80:0,3,13	1/1:3,0:3:8.99:74,9,0	1/1:2,0:2:5.99:50,6,0	1/1:1,1:7:6.02:277,6,0	0/1:3,0:3:10.25:123,0,10	0/1:3,0:3:3.43:46,0,3	0/1:4,0:4:1.39:63,0,1	0/1:3,0:3:4.39:41,0,4	0/0:2,0:2:5.99:0,6,50	0/0:3,0:3:5.99:0,6,50	0/0:2,0:2:5.99:0,6,48	0/1:3,0:3:6.71:19,0,7	0/0:3,0:3:5.36:0,5,22	1/1:3,0:3:5.98:47,6,0	1/1:0,0:8:3.01:122,3,0
chr10	60994369	.	G	GGAA	781.56	PASS	AB=0.925;AC=16;AF=0.286;AN=56;BaseQRankSum=0.193;DP=328;FS=1.000;HRun=0;HaplotypeScore=324.9725;InbreedingCoeff=-0.2234;MQ=56.07;MQ0=0;MQRankSum=0.755;QD=4.44;ReadPosRankSum=-0.978;VQSLOD=1.8545;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:21.56:0,22,270	0/1:4,0:4:9:9,0,12	0/0:6,0:6:18.04:0,18,284	0/1:13,0:13:0.27:0,0,396	0/0:18,0:18:37.75:0,38,243	0/1:10,1:12:8.49:8,0,133	0/0:5,0:5:7.99:0,8,51	0/1:17,0:17:99:129,0,124	0/1:11,0:11:16.27:16,0,91	0/0:18,0:18:44.14:0,44,313	0/0:14,0:14:35.31:0,35,232	0/0:11,0:11:24.35:0,24,151	0/0:8,0:8:14.68:0,15,98	0/1:12,0:12:57.09:57,0,64	0/1:7,0:7:0.53:1,0,57	0/0:11,0:11:13.76:0,14,151	0/0:12,0:12:12.13:0,12,64	1/1:3,0:3:1.57:61,2,0	0/1:13,0:12:50.23:50,0,58	0/1:20,0:20:42.89:43,0,180	0/0:8,0:8:20.54:0,21,143	0/1:3,1:6:10.24:35,0,10	0/1:11,2:13:14.79:15,0,125	0/0:3,0:3:5.69:0,6,36	0/1:16,0:16:99:164,0,104	0/0:18,0:18:13.56:0,14,190	0/1:20,0:18:72.24:72,0,114	0/1:2,7:9:10.42:269,0,10
chr10	60995307	.	CATTTTTAAG	C	25262.70	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=1.599;DP=511;FS=4.369;HRun=0;HaplotypeScore=164.5639;InbreedingCoeff=0.8661;MQ=60.02;MQ0=4;MQRankSum=-7.798;QD=52.74;ReadPosRankSum=5.319;VQSLOD=4.5642;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,11:15:24.08:662,24,0	1/1:0,12:12:36.12:1039,36,0	0/0:14,0:13:27.09:0,27,1133	0/0:18,0:17:38.72:0,39,1492	1/1:2,20:22:48.16:1308,48,0	1/1:3,24:28:63.22:1807,63,0	1/1:7,9:16:27.09:748,27,0	1/1:16,21:34:54.16:1342,54,0	1/1:5,9:14:24.08:693,24,0	1/1:8,25:31:69.22:1887,69,0	1/1:4,20:24:48.16:1319,48,0	1/1:4,10:13:27.09:779,27,0	1/1:3,11:13:30.10:837,30,0	1/1:2,14:16:42.14:1212,42,0	1/1:5,13:18:36.12:1008,36,0	1/1:3,8:11:24.08:662,24,0	1/1:4,6:10:11.59:313,12,0	1/1:1,5:6:6.02:173,6,0	1/1:3,15:17:42.13:1080,42,0	1/1:10,20:30:54.18:1497,54,0	1/1:10,4:14:6.02:173,6,0	1/1:4,16:20:36.12:1003,36,0	1/1:3,15:17:21.07:573,21,0	1/1:4,15:19:20.27:592,20,0	1/1:1,19:20:45.15:1299,45,0	1/1:5,17:22:48.16:1351,48,0	1/1:4,20:24:54.19:1558,54,0	1/1:0,4:4:12.04:346,12,0
chr10	60997223	.	A	AAAG	876.96	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-4.597;DP=465;FS=6.185;HRun=0;HaplotypeScore=61.1525;InbreedingCoeff=0.8270;MQ=62.17;MQ0=2;MQRankSum=-0.060;QD=43.85;ReadPosRankSum=-4.153;VQSLOD=3.2642;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:41.99:0,42,606	0/0:11,0:11:33.09:0,33,457	0/0:11,0:10:14.91:0,15,231	0/0:8,0:5:2.98:0,3,21	0/0:33,0:32:96.21:0,96,1430	0/0:14,0:14:42.14:0,42,661	0/0:7,0:7:21.07:0,21,329	1/1:3,17:18:54.08:972,54,0	0/0:16,0:16:48.15:0,48,735	0/0:22,0:22:66.20:0,66,961	0/0:18,0:18:54.16:0,54,808	0/0:18,0:18:48.14:0,48,711	0/0:16,0:16:42.11:0,42,579	0/0:20,0:20:57.19:0,57,876	0/0:20,0:20:60.19:0,60,921	0/0:16,0:16:48.16:0,48,755	0/0:15,0:15:42.12:0,42,619	0/0:18,0:18:51.13:0,51,754	0/0:18,0:18:54.18:0,54,827	0/0:19,0:19:57.18:0,57,856	0/0:6,0:6:18.06:0,18,283	0/0:11,0:11:33.10:0,33,496	0/0:16,0:16:45.15:0,45,702	0/0:9,0:9:21.02:0,21,327	0/0:25,0:25:72.23:0,72,1112	0/0:24,0:24:69.22:0,69,1031	0/0:31,0:31:93.31:0,93,1432	0/0:9,0:9:27.09:0,27,425
chr10	60999704	.	TG	T	875.43	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.651;DP=619;FS=10.220;HRun=1;HaplotypeScore=61.0705;InbreedingCoeff=0.9861;MQ=66.40;MQ0=0;MQRankSum=2.904;QD=36.48;ReadPosRankSum=-2.926;VQSLOD=2.0693;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,99,1570	0/0:6,0:6:18.06:0,18,288	0/0:30,0:26:73.65:0,74,1128	0/0:19,0:19:52:0,52,733	0/0:29,0:29:87.27:0,87,1350	0/0:20,0:20:60.19:0,60,916	0/0:14,0:14:42.13:0,42,645	1/1:0,24:24:72.22:970,72,0	0/0:25,0:25:75.26:0,75,1189	0/0:17,0:17:51.16:0,51,792	0/0:24,0:24:72.25:0,72,1150	0/0:23,0:23:69.24:0,69,1097	0/0:20,0:20:57.18:0,57,886	0/0:19,0:19:57.18:0,57,877	0/0:29,0:29:87.30:0,87,1390	0/0:19,0:19:57.19:0,57,911	0/0:28,0:28:84.29:0,84,1339	0/0:8,0:8:24.06:0,24,358	0/0:26,0:26:72.20:0,72,1123	0/0:35,0:35:99:0,105,1672	0/0:19,0:19:57.16:0,57,863	0/0:15,0:15:45.15:0,45,703	0/0:24,0:24:72.25:0,72,1151	0/0:26,0:26:78.21:0,78,1195	0/0:31,0:31:93.28:0,93,1436	0/0:21,0:21:63.20:0,63,985	0/0:27,0:27:78.18:0,78,1193	0/0:7,0:7:21.07:0,21,336
chr10	60999833	.	GTA	G	265.67	PASS	AB=0.974;AC=16;AF=0.286;AN=56;BaseQRankSum=9.797;DP=460;FS=23.065;HRun=0;HaplotypeScore=73.2577;InbreedingCoeff=-0.2467;MQ=71.71;MQ0=6;MQRankSum=-0.035;QD=1.12;ReadPosRankSum=1.262;VQSLOD=-0.0132;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:8.42:0,8,245	0/1:6,0:6:17.14:17,0,82	0/0:25,0:13:35.91:0,36,308	0/0:30,0:16:24.80:0,25,244	0/1:22,0:22:15.25:15,0,213	0/0:18,0:18:4.89:0,5,221	0/1:15,1:16:54.68:55,0,217	0/0:17,0:17:50.85:0,51,442	0/0:8,0:8:24.01:0,24,284	0/0:16,0:16:29.21:0,29,366	0/0:15,0:15:14.93:0,15,273	0/1:14,1:15:1.18:1,0,393	0/0:8,0:8:5.18:0,5,197	0/0:15,0:15:21.68:0,22,207	0/1:17,1:18:25.32:25,0,285	0/0:21,0:21:13:0,13,311	0/1:17,0:16:40.43:40,0,133	0/1:9,0:9:5.98:6,0,78	0/1:8,1:9:17.90:18,0,158	0/1:19,1:20:25.20:25,0,255	0/1:20,0:19:4.65:5,0,204	0/0:13,0:13:23.91:0,24,333	0/1:23,1:24:53.52:54,0,258	0/1:22,0:22:49.35:49,0,180	0/1:20,0:20:22.77:23,0,209	0/0:14,0:14:9.69:0,10,160	0/1:17,0:17:53.47:53,0,97	1/1:2,0:2:5.77:31,6,0
chr10	60999834	.	TAC	T	2880.96	PASS	AB=0.844;AC=39;AF=0.750;AN=52;BaseQRankSum=5.005;DP=464;FS=5.158;HRun=0;HaplotypeScore=66.3405;InbreedingCoeff=-0.0756;MQ=71.33;MQ0=6;MQRankSum=-0.813;QD=7.52;ReadPosRankSum=1.735;VQSLOD=2.4023;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,7:23:11.86:113,12,0	1/1:4,2:6:6.02:66,6,0	./.	0/0:30,0:16:0:0,0,0	1/1:12,7:22:20.61:202,21,0	1/1:12,5:19:20.72:193,21,0	0/1:13,4:18:66.51:134,0,67	./.	0/0:7,0:9:9.02:0,9,116	0/1:13,3:16:16.20:57,0,16	0/1:11,3:14:33.04:87,0,33	0/1:14,0:15:21.04:21,0,220	0/1:9,0:10:12.07:12,0,180	1/1:12,1:15:11.48:90,11,0	0/1:13,4:17:27.06:134,0,27	1/1:14,5:21:9.07:190,9,0	0/1:11,5:15:16.06:176,0,16	1/1:7,3:10:6.02:65,6,0	1/1:8,0:8:3:31,3,0	0/1:14,5:20:23.72:130,0,24	1/1:14,6:19:12.03:132,12,0	0/1:11,2:13:15:15,0,205	1/1:18,3:25:29.57:267,30,0	1/1:8,10:21:11.65:282,12,0	1/1:14,5:20:17.88:179,18,0	1/1:7,5:15:19.85:172,20,0	1/1:6,10:17:20.89:212,21,0	1/1:0,2:2:6.02:66,6,0
chr10	61001200	.	G	GTTT	5497.29	PASS	AB=1.000;AC=53;AF=0.946;AN=56;BaseQRankSum=-1.041;DP=426;FS=15.388;HRun=16;HaplotypeScore=116.6346;InbreedingCoeff=0.3684;MQ=66.28;MQ0=3;MQRankSum=-2.109;QD=13.38;ReadPosRankSum=-2.579;VQSLOD=0.7978;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:20:31.55:315,32,0	1/1:5,0:5:11.07:135,11,0	0/0:13,0:9:5.38:0,5,74	0/1:22,0:16:11.55:12,0,31	1/1:23,0:23:39.59:514,40,0	1/1:25,0:25:13.97:369,14,0	1/1:6,1:13:8.99:112,9,0	1/1:29,2:36:42.02:455,42,0	1/1:16,0:15:18.04:208,18,0	1/1:11,0:8:12.02:132,12,0	1/1:13,0:12:14.01:136,14,0	1/1:8,0:7:12.04:170,12,0	1/1:16,0:16:22:193,22,0	1/1:22,0:21:25.62:319,26,0	1/1:12,0:11:15.05:199,15,0	1/1:14,0:13:15.05:197,15,0	1/1:14,0:14:13.51:126,14,0	1/1:5,0:4:3.01:39,3,0	1/1:14,0:14:20.69:234,21,0	1/1:19,0:19:22.67:207,23,0	1/1:12,0:10:16.59:180,17,0	1/1:6,0:10:13.65:111,14,0	1/1:7,6:15:6.02:88,6,0	1/1:11,0:11:16.76:190,17,0	1/1:13,0:12:14.82:153,15,0	1/1:16,0:16:26.06:291,26,0	1/1:16,0:14:18:226,18,0	1/1:8,0:6:15.04:187,15,0
chr10	61001453	.	GA	G	902.82	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.522;DP=530;FS=5.753;HRun=5;HaplotypeScore=57.6512;InbreedingCoeff=0.9872;MQ=75.14;MQ0=1;MQRankSum=-0.539;QD=27.36;ReadPosRankSum=-3.654;VQSLOD=2.0226;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,102,1360	0/0:7,0:7:18.06:0,18,246	0/0:21,0:18:53.18:0,53,655	0/0:18,0:16:32.93:0,33,386	0/0:18,0:18:51.16:0,51,681	0/0:20,0:20:60.19:0,60,805	0/0:18,0:18:51.17:0,51,697	1/1:3,30:32:72.34:998,72,0	0/0:24,0:24:69.20:0,69,911	0/0:22,0:21:60.20:0,60,818	0/0:19,0:19:57.05:0,57,751	0/0:26,0:26:75.24:0,75,1009	0/0:18,0:18:51.10:0,51,644	0/0:12,0:12:33.10:0,33,435	0/0:14,0:14:39.10:0,39,500	0/0:13,0:13:39.13:0,39,533	0/0:15,0:15:45.15:0,45,615	0/0:8,0:8:24.08:0,24,328	0/0:18,0:18:45.14:0,45,601	0/0:30,0:30:87.29:0,87,1188	0/0:10,0:10:24.07:0,24,313	0/0:14,0:14:42.13:0,42,554	0/0:16,0:16:45.14:0,45,599	0/0:15,0:15:42.14:0,42,573	0/0:17,0:16:48.16:0,48,651	0/0:29,0:29:84.28:0,84,1148	0/0:26,0:25:72.24:0,72,978	0/0:12,0:12:36.09:0,36,473
chr10	61002813	.	A	AGTGT	5487.88	PASS	AC=42;AF=0.778;AN=54;BaseQRankSum=5.817;DP=458;FS=0.740;HRun=0;HaplotypeScore=90.5174;InbreedingCoeff=0.7296;MQ=56.25;MQ0=9;MQRankSum=-0.696;QD=17.15;ReadPosRankSum=1.616;VQSLOD=4.4871;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:16:8.97:102,9,0	1/1:5,5:11:12.02:237,12,0	0/0:22,0:11:0.47:0,0,1	./.	1/1:8,0:17:8.79:99,9,0	0/0:23,0:25:24.01:0,24,598	0/0:15,0:15:27.09:0,27,427	1/1:20,0:19:8.98:117,9,0	1/1:4,8:14:15.05:357,15,0	1/1:20,4:25:8.39:625,8,0	1/1:6,3:9:3.01:71,3,0	1/1:8,3:11:21.07:417,21,0	1/1:2,1:6:5.99:92,6,0	1/1:5,5:13:15.05:325,15,0	1/1:4,0:17:23.86:175,24,0	1/1:5,6:11:12.04:275,12,0	1/1:11,12:24:27.04:543,27,0	1/1:13,1:14:14.99:231,15,0	1/1:12,0:11:2.97:20,3,0	1/1:13,5:21:29.99:509,30,0	1/1:10,0:9:6.02:100,6,0	0/0:15,0:16:39.11:0,39,555	0/0:18,0:18:10.47:0,10,497	0/0:14,0:14:5.52:0,6,225	1/1:11,1:12:6.02:129,6,0	1/1:14,6:23:23.99:352,24,0	1/1:18,3:23:29.93:452,30,0	1/1:2,3:7:15:258,15,0
chr10	61002827	.	T	TGTGT	5307.29	PASS	AC=42;AF=0.778;AN=54;BaseQRankSum=5.742;DP=482;FS=0.000;HRun=0;HaplotypeScore=91.8905;InbreedingCoeff=0.6946;MQ=51.91;MQ0=11;MQRankSum=-3.113;QD=15.94;ReadPosRankSum=1.223;VQSLOD=4.4729;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:16,5:22:8.97:102,9,0	1/1:12,0:12:12.02:237,12,0	0/0:25,0:10:1.36:0,1,3	./.	1/1:18,0:18:5.79:73,6,0	0/0:25,0:25:42.12:0,42,619	0/0:17,0:17:26.32:0,26,426	1/1:18,0:17:2.97:20,3,0	1/1:16,0:16:15.05:357,15,0	1/1:28,0:27:8.39:625,8,0	1/1:9,0:9:3.01:71,3,0	1/1:13,0:13:21.07:417,21,0	1/1:6,0:6:5.99:92,6,0	1/1:13,0:13:15.05:325,15,0	1/1:17,0:17:23.86:175,24,0	1/1:13,0:13:12.03:275,12,0	1/1:28,0:27:27.04:543,27,0	1/1:12,0:11:14.99:231,15,0	1/1:10,0:9:2.97:20,3,0	1/1:21,0:21:29.99:509,30,0	1/1:9,0:8:6.02:100,6,0	0/0:18,0:17:39.11:0,39,555	0/0:24,0:23:10.47:0,10,497	0/0:13,0:12:5.52:0,6,225	1/1:12,0:12:3.01:72,3,0	1/1:24,0:24:23.99:352,24,0	1/1:25,0:24:29.93:452,30,0	1/1:7,0:7:15:258,15,0
chr10	61003058	.	CAGCAGTGTA	C	1300.62	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.033;DP=663;FS=0.950;HRun=0;HaplotypeScore=192.9979;InbreedingCoeff=0.9815;MQ=71.62;MQ0=0;MQRankSum=-6.588;QD=68.45;ReadPosRankSum=-1.447;VQSLOD=2.9801;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,141,5931	0/0:6,0:6:15.05:0,15,735	0/0:24,0:24:69.23:0,69,2820	0/0:24,0:24:40.77:0,41,2625	0/0:22,0:22:54.19:0,54,2405	0/0:28,0:28:78.25:0,78,3377	0/0:29,0:29:87.27:0,87,3971	1/1:3,16:19:45.15:1395,45,0	0/0:27,0:27:81.28:0,81,3727	0/0:23,0:23:66.22:0,66,3053	0/0:22,0:22:57.18:0,57,2603	0/0:20,0:20:60.21:0,60,2843	0/0:18,0:18:54.19:0,54,2524	0/0:29,0:29:81.26:0,81,3610	0/0:20,0:20:57.18:0,57,2515	0/0:11,0:11:27.08:0,27,1201	0/0:30,0:30:90.31:0,90,4202	0/0:21,0:21:63.22:0,63,3015	0/0:21,0:21:57.20:0,57,2797	0/0:26,0:26:72.20:0,72,3342	0/0:54,0:54:99:0,154,7195	0/0:15,0:15:44.32:0,44,1842	0/0:15,0:15:45.15:0,45,2167	0/0:27,0:27:81.28:0,81,3879	0/0:20,0:20:57.20:0,57,2698	0/0:32,0:32:96.32:0,96,4414	0/0:23,0:22:63.22:0,63,2790	0/0:9,0:9:24.03:0,24,1043
chr10	61004383	.	CA	C	2947.36	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=9.960;DP=580;FS=10.317;HRun=7;HaplotypeScore=58.8124;InbreedingCoeff=0.9589;MQ=79.75;MQ0=0;MQRankSum=-1.327;QD=24.77;ReadPosRankSum=3.313;VQSLOD=3.8450;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:84.26:0,84,1043	0/0:13,0:13:30.09:0,30,365	0/0:21,0:20:51.01:0,51,573	0/0:17,0:16:30.08:0,30,352	0/0:21,0:21:57.17:0,57,704	1/1:1,28:29:81.18:826,81,0	1/1:1,16:17:48.11:490,48,0	0/0:36,0:36:96.31:0,96,1207	0/0:25,0:25:72.22:0,72,893	0/0:36,0:36:99:0,99,1245	0/0:27,0:27:66.20:0,66,817	0/0:12,0:12:30.10:0,30,377	0/0:20,0:20:54.17:0,54,679	0/0:9,0:9:27.09:0,27,338	0/0:19,0:19:54.17:0,54,679	0/0:16,0:16:45.14:0,45,566	0/0:18,0:18:54.15:0,54,663	0/0:10,1:11:2.87:0,3,329	0/0:14,0:14:33.11:0,33,415	0/0:24,0:24:66.21:0,66,830	0/0:16,0:16:45.14:0,45,566	1/1:2,27:29:72.16:735,72,0	1/1:2,19:21:53.99:551,54,0	1/1:3,20:23:51.12:520,51,0	0/0:11,0:11:33.11:0,33,415	0/0:25,0:25:75.23:0,75,932	0/0:27,0:27:78.22:0,78,955	0/0:14,0:14:36.12:0,36,453
chr10	61006977	.	A	ACTT	1138.95	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=0.697;DP=489;FS=6.027;HRun=0;HaplotypeScore=73.2069;InbreedingCoeff=0.9829;MQ=78.21;MQ0=0;MQRankSum=-3.297;QD=43.81;ReadPosRankSum=-3.153;VQSLOD=4.2209;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:42.14:0,42,674	0/0:9,0:9:21.04:0,21,316	0/0:15,0:15:36.08:0,36,524	0/0:11,0:11:21.04:0,21,305	0/0:25,0:25:72.17:0,72,1118	0/0:29,0:29:84.29:0,84,1365	0/0:16,0:16:45.15:0,45,734	1/1:9,16:26:60.15:1234,60,0	0/0:10,0:9:27.09:0,27,441	0/0:22,0:22:63.21:0,63,1009	0/0:13,0:13:36.11:0,36,563	0/0:11,0:11:30.10:0,30,490	0/0:15,0:15:42.14:0,42,686	0/0:11,0:11:30.10:0,30,490	0/0:11,0:11:33.11:0,33,539	0/0:20,0:20:51.17:0,51,831	0/0:11,0:11:30.10:0,30,472	0/0:12,0:12:27.09:0,27,432	0/0:19,0:19:51.17:0,51,823	0/0:37,0:37:99:0,108,1703	0/0:15,0:14:39.13:0,39,628	0/0:21,0:21:60.17:0,60,951	0/0:20,0:20:60.16:0,60,927	0/0:7,0:7:21.07:0,21,342	0/0:30,0:30:78.22:0,78,1222	0/0:16,0:15:45.15:0,45,711	0/0:28,0:28:78.27:0,78,1274	0/0:10,0:10:27.09:0,27,441
chr10	61007094	.	AGT	A	960.61	PASS	AB=0.879;AC=31;AF=0.705;AN=44;BaseQRankSum=1.703;DP=500;FS=0.000;HRun=0;HaplotypeScore=82.2254;InbreedingCoeff=0.4500;MQ=67.26;MQ0=24;MQRankSum=-0.261;QD=3.35;ReadPosRankSum=1.732;VQSLOD=1.7702;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:25:5.73:0,6,50	1/1:2,2:4:3.01:32,3,0	./.	./.	./.	1/1:9,0:18:6.15:29,6,0	1/1:12,0:15:5.41:28,5,0	./.	0/0:9,0:12:9.01:0,9,89	./.	1/1:12,6:16:9.02:96,9,0	1/1:5,2:7:9.02:96,9,0	1/1:6,4:10:9.02:96,9,0	1/1:11,6:17:8.89:96,9,0	1/1:8,6:14:11.86:110,12,0	1/1:11,6:17:12.03:129,12,0	0/1:16,2:17:25.66:26,0,38	0/0:14,0:14:13.22:0,13,118	1/1:19,0:15:2.84:14,3,0	0/1:18,9:27:23.69:125,0,24	1/1:26,0:25:5.88:47,6,0	1/1:14,0:21:5.68:28,6,0	./.	1/1:15,0:18:5.68:28,6,0	0/1:17,0:15:0:0,0,0	0/0:24,0:22:24.82:0,25,245	1/1:15,0:15:12.03:127,12,0	0/0:4,0:9:3:0,3,26
chr10	61007238	.	TC	T	878.50	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-0.907;DP=328;FS=8.805;HRun=1;HaplotypeScore=40.8592;InbreedingCoeff=0.9249;MQ=81.60;MQ0=0;MQRankSum=0.614;QD=36.60;ReadPosRankSum=-2.827;VQSLOD=1.8407;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:6:18.06:0,18,268	0/0:6,0:6:18.06:0,18,265	0/0:16,0:16:45.14:0,45,647	0/0:16,0:16:48.14:0,48,688	0/0:23,0:23:66.08:0,66,936	0/0:12,0:12:36.04:0,36,488	0/0:8,0:8:18.06:0,18,268	1/1:0,24:24:72.22:973,72,0	0/0:8,0:8:22.56:0,23,284	0/0:22,0:22:66.20:0,66,950	0/0:7,0:7:21.07:0,21,312	0/0:6,0:6:18.06:0,18,262	0/0:10,0:10:27.07:0,27,380	0/0:15,0:15:45.15:0,45,662	0/0:10,0:10:25.63:0,26,359	0/0:14,0:14:39.12:0,39,554	0/0:14,0:14:39.10:0,39,553	0/0:11,0:11:30.08:0,30,416	0/0:10,0:10:27.06:0,27,378	0/0:13,0:13:39.09:0,39,554	0/0:7,0:7:21.07:0,21,313	0/0:17,0:17:45.15:0,45,662	0/0:11,0:11:30.10:0,30,446	0/0:5,0:5:15.05:0,15,216	0/0:10,0:10:30.10:0,30,417	0/0:12,0:12:36.08:0,36,512	0/0:10,0:10:27.09:0,27,396	0/0:5,0:5:15.05:0,15,224
chr10	61012621	.	A	AT	1201.83	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-9.093;DP=438;FS=9.945;HRun=3;HaplotypeScore=41.7080;InbreedingCoeff=0.8881;MQ=64.35;MQ0=0;MQRankSum=3.361;QD=34.34;ReadPosRankSum=-4.885;VQSLOD=1.0291;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:39.10:0,39,453	0/0:10,0:10:30.01:0,30,327	0/0:7,0:7:18.02:0,18,194	0/0:6,0:6:8.31:0,8,122	0/0:28,0:28:81.16:0,81,929	0/0:13,0:12:35.99:0,36,379	0/0:12,0:12:36.07:0,36,414	1/1:2,33:35:99:1297,99,0	0/0:20,0:20:60.12:0,60,699	0/0:22,0:22:60.17:0,60,702	0/0:20,0:20:60.17:0,60,702	0/0:6,0:6:18.06:0,18,215	0/0:9,0:9:26.11:0,26,293	0/0:13,0:13:39.12:0,39,465	0/0:13,0:13:39.05:0,39,448	0/0:8,0:8:21.06:0,21,251	0/0:26,0:26:69.19:0,69,811	0/0:16,0:16:42.10:0,42,480	0/0:13,0:13:36.07:0,36,398	0/0:31,0:31:93.21:0,93,1067	0/0:6,0:6:12.04:0,12,144	0/0:11,0:11:30.09:0,30,359	0/0:17,0:17:48.12:0,48,560	0/0:7,0:7:21.05:0,21,241	0/0:13,0:13:36.11:0,36,430	0/0:28,0:28:84.16:0,84,939	0/0:19,0:19:54.15:0,54,625	0/0:14,0:14:30.09:0,30,359
chr10	61013177	.	TA	T	419.36	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=-0.138;DP=340;FS=12.441;HRun=7;HaplotypeScore=91.3853;InbreedingCoeff=0.5566;MQ=52.71;MQ0=0;MQRankSum=0.574;QD=14.46;ReadPosRankSum=-3.766;VQSLOD=1.4919;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:41.97:0,42,458	0/0:3,0:3:9.03:0,9,113	0/0:10,1:7:21.01:0,21,225	0/1:5,0:4:11.04:11,0,31	0/0:17,0:17:51.16:0,51,639	0/0:12,0:12:36.08:0,36,433	0/0:4,0:3:3.01:0,3,38	1/1:5,18:23:51.08:511,51,0	0/0:11,0:11:30.10:0,30,377	0/0:12,0:12:33.11:0,33,415	0/0:21,0:21:63.16:0,63,770	0/0:8,0:8:24.08:0,24,299	0/0:9,0:9:27.09:0,27,338	0/0:6,0:6:18.06:0,18,222	0/0:11,0:11:27.09:0,27,339	0/0:9,0:9:24.04:0,24,285	0/0:10,0:10:30.10:0,30,376	0/0:8,0:8:24.08:0,24,302	0/0:16,0:16:42.10:0,42,510	0/0:23,0:23:66.20:0,66,813	0/0:9,0:9:27.09:0,27,339	0/0:12,0:12:30.10:0,30,377	0/0:15,0:15:45.10:0,45,546	0/0:9,0:9:21.07:0,21,259	0/0:15,0:15:42.13:0,42,528	0/0:17,0:17:45.58:0,46,566	0/0:20,0:20:60.19:0,60,751	0/0:8,0:8:24.08:0,24,301
chr10	61013229	.	G	GA	679.32	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-4.935;DP=418;FS=18.366;HRun=5;HaplotypeScore=57.8250;InbreedingCoeff=0.9180;MQ=78.90;MQ0=0;MQRankSum=-1.621;QD=30.88;ReadPosRankSum=-3.209;VQSLOD=1.2090;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:63.16:0,63,677	0/0:5,0:5:15.02:0,15,153	0/0:12,0:12:33.02:0,33,335	0/0:14,0:14:34.89:0,35,352	0/0:21,0:21:63.14:0,63,669	0/0:14,0:14:42.11:0,42,451	0/0:3,0:3:9.02:0,9,97	1/1:2,20:22:60.19:774,60,0	0/0:16,0:16:48.12:0,48,516	0/0:16,0:16:48.12:0,48,516	0/0:20,0:20:54.14:0,54,580	0/0:12,0:12:33.08:0,33,354	0/0:10,0:10:30.08:0,30,322	0/0:7,0:7:18.05:0,18,193	0/0:15,0:15:39.10:0,39,419	0/0:9,0:9:27.07:0,27,290	0/0:21,0:21:60.15:0,60,645	0/0:12,0:12:33.08:0,33,355	0/0:16,0:16:36.08:0,36,387	0/0:23,0:23:60.13:0,60,637	0/0:13,0:14:35.30:0,35,362	0/0:14,0:14:39.05:0,39,400	0/0:14,0:14:39.10:0,39,419	0/0:10,0:10:21.05:0,21,226	0/0:14,0:14:36.09:0,36,387	0/0:22,0:22:66.17:0,66,709	0/0:20,0:20:57.14:0,57,613	0/0:16,0:16:48.12:0,48,516
chr10	61013888	.	TA	T	778.16	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.453;DP=638;FS=0.000;HRun=2;HaplotypeScore=59.0650;InbreedingCoeff=0.9981;MQ=66.12;MQ0=1;MQRankSum=1.058;QD=35.37;ReadPosRankSum=-3.534;VQSLOD=2.4948;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:99:0,99,1488	0/0:9,0:9:27.09:0,27,413	0/0:21,0:20:60.14:0,60,861	0/0:26,0:23:62.28:0,62,844	0/0:29,0:29:84.25:0,84,1241	0/0:21,0:21:63.21:0,63,963	0/0:11,0:11:33.10:0,33,484	1/1:0,22:22:66.19:873,66,0	0/0:28,0:28:84.29:0,84,1285	0/0:29,0:29:87.29:0,87,1314	0/0:27,0:26:75.23:0,75,1104	0/0:13,0:13:39.13:0,39,594	0/0:24,0:24:72.22:0,72,1058	0/0:14,0:14:42.14:0,42,642	0/0:29,0:29:87.27:0,87,1287	0/0:22,0:22:66.22:0,66,1010	0/0:31,0:31:90.26:0,90,1322	0/0:18,0:18:51.17:0,51,780	0/0:17,0:17:51.15:0,51,739	0/0:36,0:36:99:0,108,1595	0/0:30,0:30:90.31:0,90,1377	0/0:26,0:26:75.20:0,75,1083	0/0:18,0:18:54.15:0,54,800	0/0:10,0:10:30.10:0,30,459	0/0:14,0:14:42.13:0,42,622	0/0:31,0:31:90.28:0,90,1319	0/0:30,0:30:90.27:0,90,1332	0/0:19,0:19:54.18:0,54,826
chr10	61014398	.	C	CT	719.92	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-4.164;DP=458;FS=0.781;HRun=7;HaplotypeScore=62.3882;InbreedingCoeff=0.8993;MQ=59.62;MQ0=1;MQRankSum=1.657;QD=21.17;ReadPosRankSum=-4.237;VQSLOD=2.0043;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:60.03:0,60,568	0/0:8,0:8:21.02:0,21,197	0/0:6,0:5:8.79:0,9,77	0/0:9,0:9:20.97:0,21,187	0/0:32,0:32:81.07:0,81,772	0/0:19,0:19:45.07:0,45,434	0/0:9,0:9:27.04:0,27,261	1/1:10,24:34:23.79:813,24,0	0/0:16,0:16:42.03:0,42,397	0/0:21,0:21:63.10:0,63,608	0/0:24,0:24:66.11:0,66,637	0/0:6,0:6:15.01:0,15,141	0/0:13,0:13:24.02:0,24,231	0/0:9,0:9:21.03:0,21,203	0/0:14,0:14:36.06:0,36,347	0/0:7,0:7:18.01:0,18,168	0/0:13,0:13:31.29:0,31,292	0/0:17,0:17:48.05:0,48,456	0/0:20,0:19:48.08:0,48,463	0/0:30,0:30:84.10:0,84,803	0/0:17,0:17:48.06:0,48,458	0/0:17,0:17:51.08:0,51,492	0/0:18,0:18:54.07:0,54,515	0/0:7,0:7:18.03:0,18,174	0/0:19,0:19:48.07:0,48,463	0/0:14,0:14:36.05:0,36,348	0/0:18,0:18:47.97:0,48,463	0/0:19,0:19:54.09:0,54,521
chr10	61015291	.	GTT	G	3153.21	PASS	AB=0.614;AC=43;AF=0.768;AN=56;BaseQRankSum=-7.929;DP=283;FS=19.218;HRun=14;HaplotypeScore=39.2773;InbreedingCoeff=0.5497;MQ=67.31;MQ0=9;MQRankSum=1.503;QD=12.66;ReadPosRankSum=3.225;VQSLOD=0.6206;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,10:14:16.94:148,17,0	1/1:1,2:3:6:56,6,0	0/0:13,0:7:9.02:0,9,103	0/0:9,0:8:11.45:0,11,111	1/1:3,10:13:8.88:130,9,0	0/1:1,1:7:12.28:12,0,28	0/0:1,0:4:7.49:0,7,26	0/0:5,0:4:0:0,0,0	1/1:2,14:16:25.58:369,26,0	1/1:4,10:14:22.57:263,23,0	1/1:2,3:5:8.99:83,9,0	1/1:2,6:8:18.01:166,18,0	1/1:4,3:7:11.58:95,12,0	1/1:0,3:3:9.01:83,9,0	1/1:3,10:13:27:250,27,0	1/1:2,3:5:8.99:83,9,0	1/1:5,5:9:5.52:78,6,0	1/1:5,6:10:9.43:84,9,0	1/1:6,11:15:23.83:250,24,0	1/1:4,14:19:35.73:317,36,0	1/1:3,3:8:11.41:79,11,0	0/1:7,1:13:6.83:7,0,49	0/1:6,1:14:4.43:4,0,59	0/0:0,0:3:7.49:0,7,26	1/1:3,14:14:32.98:305,33,0	1/1:4,8:10:20.99:194,21,0	1/1:3,6:9:14.03:117,14,0	1/1:2,6:7:15:139,15,0
chr10	61022135	.	AT	A	13105.61	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-2.038;DP=549;FS=3.626;HRun=8;HaplotypeScore=72.1778;InbreedingCoeff=0.9930;MQ=55.70;MQ0=10;MQRankSum=-1.953;QD=25.70;ReadPosRankSum=2.917;VQSLOD=5.7717;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,22:22:60.09:579,60,0	1/1:2,9:11:27.03:257,27,0	0/0:15,0:8:21.05:0,21,231	0/0:24,0:9:24.06:0,24,266	1/1:2,29:31:80.63:781,81,0	1/1:0,19:19:57.09:550,57,0	1/1:0,12:11:23.91:232,24,0	1/1:4,22:24:63.10:608,63,0	1/1:3,20:23:66.09:631,66,0	1/1:5,14:19:45.06:435,45,0	1/1:2,23:25:63.10:608,63,0	1/1:0,8:8:24.04:232,24,0	1/1:0,15:15:45.07:434,45,0	1/1:2,10:12:33.05:318,33,0	1/1:3,16:18:51.08:492,51,0	1/1:2,12:13:39.02:367,39,0	1/1:0,30:29:81.13:781,81,0	1/1:3,11:14:36.05:348,36,0	1/1:2,16:15:45:418,45,0	1/1:3,30:32:93.14:892,93,0	1/1:0,9:9:27.04:261,27,0	1/1:3,26:28:78.13:753,78,0	1/1:0,24:24:72.12:695,72,0	1/1:1,10:11:30.04:290,30,0	1/1:2,13:15:36.06:348,36,0	1/1:8,20:28:69.10:666,69,0	1/1:1,20:21:57.09:550,57,0	1/1:2,19:21:60.10:579,60,0
chr10	61022206	.	T	TC	21069.36	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-3.922;DP=560;FS=0.000;HRun=3;HaplotypeScore=63.9827;InbreedingCoeff=0.9771;MQ=55.75;MQ0=1;MQRankSum=0.152;QD=39.53;ReadPosRankSum=4.172;VQSLOD=4.6647;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,26:26:63.21:1006,63,0	1/1:1,10:11:27.09:431,27,0	0/0:14,0:10:27.09:0,27,377	0/0:13,0:12:30.06:0,30,383	1/1:2,27:28:57.18:886,57,0	1/1:1,25:25:72.25:1150,72,0	1/1:0,10:8:24.08:383,24,0	1/1:0,11:5:12.01:164,12,0	1/1:4,18:22:57.18:883,57,0	1/1:1,32:32:87.30:1390,87,0	1/1:1,25:26:63.21:1006,63,0	1/1:1,15:16:42.14:671,42,0	1/1:0,15:15:45.15:718,45,0	1/1:0,11:11:33.11:527,33,0	1/1:1,15:16:45.15:719,45,0	1/1:2,8:9:18.06:287,18,0	1/1:2,32:35:81.27:1291,81,0	1/1:1,14:14:33.11:525,33,0	1/1:2,18:17:51.13:770,51,0	1/1:3,34:36:84.28:1330,84,0	1/1:3,15:18:48.16:758,48,0	1/1:0,30:29:81.28:1294,81,0	1/1:2,18:20:42.14:670,42,0	1/1:1,10:11:27.07:407,27,0	1/1:1,15:16:48.16:764,48,0	1/1:1,27:28:81.28:1294,81,0	1/1:3,21:25:69.19:1026,69,0	1/1:0,15:15:45.15:719,45,0
chr10	61022299	.	GT	G	13012.64	PASS	AB=0.548;AC=39;AF=0.696;AN=56;BaseQRankSum=7.247;DP=594;FS=0.000;HRun=4;HaplotypeScore=53.9526;InbreedingCoeff=0.9007;MQ=54.49;MQ0=15;MQRankSum=3.679;QD=31.36;ReadPosRankSum=2.467;VQSLOD=5.0617;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,38:39:99:1187,102,0	1/1:0,13:13:36.11:432,36,0	0/0:35,0:5:12.02:0,12,125	0/0:22,0:4:12.03:0,12,155	1/1:0,31:31:84.16:975,84,0	0/0:22,0:22:66.22:0,66,923	0/0:16,0:15:36.10:0,36,485	0/0:24,0:13:33.02:0,33,417	1/1:0,24:24:63.19:756,63,0	1/1:4,23:27:80.60:932,81,0	1/1:2,15:17:45.14:540,45,0	1/1:1,10:11:30.09:360,30,0	1/1:0,5:5:15.05:180,15,0	1/1:0,6:6:18.06:216,18,0	1/1:0,17:17:48.15:576,48,0	1/1:1,14:15:37.36:435,37,0	1/1:5,23:27:66.20:791,66,0	1/1:1,16:17:28.15:506,28,0	1/1:3,12:11:33.07:380,33,0	1/1:6,23:29:78.22:916,78,0	1/1:3,39:42:99:1221,102,0	0/0:20,0:20:57.18:0,57,781	0/0:20,1:21:27.21:0,27,803	0/0:19,0:19:51.17:0,51,714	0/1:3,14:17:30:488,0,30	1/1:1,22:23:66.20:792,66,0	1/1:0,29:29:87.27:1043,87,0	1/1:2,8:10:24.07:288,24,0
chr10	61022622	.	T	TTTCTGGGTCTTGAA	2153.24	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=-0.364;DP=633;FS=0.892;HRun=0;HaplotypeScore=220.7402;InbreedingCoeff=0.6445;MQ=62.01;MQ0=5;MQRankSum=-5.551;QD=43.94;ReadPosRankSum=-3.277;VQSLOD=2.7975;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:21.31:0,21,3015	0/0:11,0:11:30.10:0,30,1215	0/0:39,0:21:37.48:0,37,993	0/0:33,0:21:45.15:0,45,1866	0/0:38,0:38:93.18:0,93,3702	0/0:17,0:17:48.15:0,48,1857	0/0:11,0:11:30.10:0,30,1103	1/1:18,6:19:48.16:2232,48,0	0/0:28,0:28:81.28:0,81,3329	0/0:22,0:22:60.19:0,60,2127	0/0:25,0:25:69.23:0,69,2495	0/0:9,0:9:27.09:0,27,892	0/0:27,0:27:75.26:0,75,2946	0/0:23,0:23:66.21:0,66,2548	0/0:23,0:23:66.21:0,66,2440	0/0:21,0:21:63.22:0,63,2567	0/1:22,0:22:27.21:27,0,2002	0/0:17,0:15:30.09:0,30,1010	0/0:20,0:19:54.19:0,54,1973	0/0:25,0:24:72.21:0,72,2617	0/0:15,0:15:45.15:0,45,1774	0/0:31,0:31:87.29:0,87,3347	0/0:21,0:21:57.18:0,57,2136	0/0:10,0:10:27.09:0,27,1080	0/0:17,0:17:48.15:0,48,1562	0/0:24,0:24:69.22:0,69,2489	0/0:36,0:36:99:0,102,3978	0/0:10,0:10:30.07:0,30,906
chr10	61025036	.	A	AT	634.55	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.005;DP=577;FS=1.839;HRun=7;HaplotypeScore=62.2566;InbreedingCoeff=0.9720;MQ=59.42;MQ0=0;MQRankSum=-0.941;QD=24.41;ReadPosRankSum=-4.314;VQSLOD=2.0220;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,115,1094	0/0:9,0:9:24.02:0,24,226	0/0:14,0:12:15:0,15,136	0/0:9,0:9:21.02:0,21,196	0/0:40,0:40:99:0,111,1071	0/0:23,0:23:63.08:0,63,597	0/0:9,0:9:27.03:0,27,254	1/1:3,23:25:63.13:729,63,0	0/0:21,0:21:51.07:0,51,492	0/0:19,0:19:57.09:0,57,549	0/0:27,0:27:75.11:0,75,724	0/0:10,0:9:24.04:0,24,232	0/0:18,0:18:48.07:0,48,463	0/0:11,0:11:27.04:0,27,260	0/0:13,0:13:33.05:0,33,319	0/0:18,0:18:48.06:0,48,458	0/0:27,0:27:81.07:0,81,771	0/0:19,0:18:45.07:0,45,434	0/0:16,0:15:39.06:0,39,373	0/0:34,0:34:93.10:0,93,888	0/0:21,0:21:51.07:0,51,492	0/0:31,0:31:87.14:0,87,840	0/0:15,0:15:39.06:0,39,376	0/0:15,0:15:36.05:0,36,348	0/0:22,0:22:63.10:0,63,608	0/0:30,0:30:81.12:0,81,782	0/0:21,0:19:50.81:0,51,475	0/0:13,0:13:24.03:0,24,232
chr10	61026889	.	A	ATCCC	4832.08	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-0.617;DP=551;FS=1.119;HRun=0;HaplotypeScore=133.4957;InbreedingCoeff=0.8623;MQ=68.08;MQ0=1;MQRankSum=-3.629;QD=9.70;ReadPosRankSum=6.399;VQSLOD=3.3554;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,0:36:48.79:167,49,0	1/1:0,0:10:21.52:75,22,0	0/0:26,0:23:62.41:0,62,887	0/0:27,0:25:28.62:0,29,850	1/1:1,0:25:51.70:203,52,0	1/1:2,16:25:35.82:838,36,0	1/1:2,13:19:14.67:354,15,0	1/1:19,0:26:5.05:236,5,0	1/1:0,0:16:28.50:95,28,0	1/1:1,0:24:50.02:240,50,0	1/1:0,0:24:47.56:174,48,0	1/1:0,0:18:36.36:120,36,0	1/1:0,0:14:24.81:84,25,0	1/1:0,0:12:20.19:68,20,0	1/1:0,0:31:56.26:195,56,0	1/1:0,0:12:21.34:73,21,0	1/1:1,0:15:30.46:112,30,0	1/1:0,0:8:14.45:50,14,0	1/1:1,0:18:35.53:159,36,0	1/1:1,0:32:59.33:240,59,0	1/1:0,0:21:38.68:146,39,0	1/1:2,12:16:12.86:217,13,0	1/1:1,9:17:11.27:270,11,0	1/1:1,10:14:8.98:252,9,0	1/1:1,0:16:21.96:91,22,0	1/1:1,0:17:36.41:184,36,0	1/1:1,0:16:28.89:96,29,0	1/1:1,0:15:26.33:91,26,0
chr10	61028516	.	CAA	C	11652.50	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-6.139;DP=486;FS=23.658;HRun=10;HaplotypeScore=64.8458;InbreedingCoeff=0.8990;MQ=62.70;MQ0=3;MQRankSum=-2.110;QD=26.19;ReadPosRankSum=3.510;VQSLOD=2.9078;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,18:24:44.95:476,45,0	1/1:1,10:11:2.33:212,2,0	0/0:15,0:11:24.03:0,24,322	0/0:14,0:12:8.89:0,9,234	1/1:0,28:28:81.21:901,81,0	1/1:2,15:17:39.09:433,39,0	1/1:0,11:11:27.07:301,27,0	1/1:3,21:24:50.47:543,50,0	1/1:0,19:18:51.14:569,51,0	1/1:2,14:16:42.11:467,42,0	1/1:4,16:19:42.10:468,42,0	1/1:2,12:14:36.09:401,36,0	1/1:2,13:15:27.03:301,27,0	1/1:2,16:18:42.03:451,42,0	1/1:2,14:16:39.09:435,39,0	1/1:0,10:10:21.06:234,21,0	1/1:1,17:18:42.11:468,42,0	1/1:4,13:17:33.06:368,33,0	1/1:3,8:9:11.96:192,12,0	1/1:1,25:25:64.33:688,64,0	0/0:3,0:11:22.96:0,23,93	1/1:0,14:14:39.09:435,39,0	1/1:3,17:20:48.08:535,48,0	1/1:0,11:11:30.08:334,30,0	1/1:2,20:22:51.13:569,51,0	1/1:1,20:21:60.16:668,60,0	1/1:0,25:25:60.16:668,60,0	1/1:0,16:16:48.13:535,48,0
chr10	61032797	.	ATAT	A	989.35	PASS	AC=2;AF=0.038;AN=52;BaseQRankSum=7.085;DP=229;FS=9.459;HRun=0;HaplotypeScore=37.4298;InbreedingCoeff=0.5378;MQ=81.56;MQ0=1;MQRankSum=1.653;QD=31.91;ReadPosRankSum=-3.137;VQSLOD=1.8823;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:39.12:0,39,776	0/0:6,0:6:18.05:0,18,355	0/0:7,0:5:11.62:0,12,140	0/0:20,0:15:8.16:0,8,235	0/0:10,0:10:24.05:0,24,446	0/0:13,0:13:36.11:0,36,716	./.	1/1:2,29:31:84.14:1083,84,0	0/0:2,0:2:6.01:0,6,93	0/0:7,0:7:21.07:0,21,425	0/0:11,0:11:30.08:0,30,546	0/0:9,0:9:24.07:0,24,449	0/0:3,0:3:9.02:0,9,159	0/0:4,0:4:12.02:0,12,173	0/0:4,0:4:12.04:0,12,265	0/0:5,0:5:15.04:0,15,290	0/0:13,0:13:36.12:0,36,794	0/0:7,0:7:18.04:0,18,328	0/0:16,0:15:41.98:0,42,758	0/0:12,0:12:36.12:0,36,795	./.	0/0:1,0:1:3.01:0,3,66	0/0:7,0:7:15.05:0,15,317	0/0:2,0:2:3:0,3,27	0/0:5,0:5:12.04:0,12,265	0/0:8,0:8:21.04:0,21,330	0/0:6,0:6:18.03:0,18,278	0/0:6,0:6:14.82:0,15,331
chr10	61033123	.	ATGATG	A	1325	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=1.354;DP=413;FS=34.660;HRun=0;HaplotypeScore=99.0155;InbreedingCoeff=0.7668;MQ=92.05;MQ0=0;MQRankSum=-3.487;QD=42.74;ReadPosRankSum=-3.487;VQSLOD=1.4479;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:54.19:0,54,1529	0/0:3,0:3:9.03:0,9,279	0/0:32,0:31:80.64:0,81,1744	0/0:29,0:30:83.87:0,84,2050	0/0:19,0:19:51.18:0,51,1482	0/0:22,0:22:54.18:0,54,1507	0/0:22,0:22:60.21:0,60,1661	1/1:7,24:31:78.25:1420,78,0	0/0:14,0:14:39.13:0,39,1098	0/0:11,0:11:33.11:0,33,973	0/0:2,0:2:6.02:0,6,190	0/0:11,0:11:33.11:0,33,946	0/0:9,0:9:24.08:0,24,728	0/0:9,0:9:27.09:0,27,804	0/0:6,0:6:18.06:0,18,571	0/0:9,0:9:27.08:0,27,643	0/0:19,0:19:57.20:0,57,1619	0/0:4,0:4:9.03:0,9,184	0/0:10,0:10:24.08:0,24,695	0/0:12,0:12:36.09:0,36,896	0/0:25,0:25:66.23:0,66,1922	0/0:12,0:12:33.11:0,33,852	0/0:11,0:11:21.04:0,21,609	0/0:25,0:25:63.22:0,63,1812	0/0:9,0:9:27.07:0,27,684	0/0:13,0:13:39.13:0,39,1183	0/0:17,0:16:51.16:0,51,1435	0/0:3,0:3:9.03:0,9,282
chr10	61033143	.	A	AT	2151.86	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-11.074;DP=448;FS=1.685;HRun=7;HaplotypeScore=94.4271;InbreedingCoeff=0.7863;MQ=79.79;MQ0=1;MQRankSum=0.604;QD=22.65;ReadPosRankSum=4.740;VQSLOD=3.3738;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:19.50:0,20,118	0/0:3,0:3:9.01:0,9,85	0/0:40,0:31:33.67:0,34,388	0/0:24,0:24:38.46:0,38,318	0/0:20,0:20:26.18:0,26,216	1/1:2,21:23:48.15:579,48,0	1/1:4,10:14:24.07:290,24,0	0/0:25,0:25:67.48:0,67,405	0/0:14,0:14:0.90:0,1,114	0/0:12,0:12:8.92:0,9,46	0/0:4,0:4:2.97:0,3,28	0/0:13,0:13:11.15:0,11,53	0/0:14,0:14:23.58:0,24,145	0/0:13,0:13:20.34:0,20,164	0/0:13,0:13:21.97:0,22,178	0/0:13,0:13:24.72:0,25,192	0/0:21,0:21:37.66:0,38,319	0/0:0,0:8:4.98:0,5,23	0/0:11,0:11:7.90:0,8,46	0/0:11,0:11:9.11:0,9,47	0/0:26,0:27:17.13:0,17,179	1/1:1,15:16:28.29:313,28,0	1/1:2,17:19:39.11:453,39,0	1/1:1,22:23:57.17:687,57,0	0/0:8,0:8:4.95:0,5,22	0/0:2,0:11:17.27:0,17,54	0/0:21,0:21:31.33:0,31,213	0/0:1,0:6:8.33:0,8,25
chr10	61033150	.	TG	T	350.62	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=1.935;DP=420;FS=9.565;HRun=9;HaplotypeScore=90.5336;InbreedingCoeff=0.6781;MQ=75.45;MQ0=1;MQRankSum=-2.803;QD=9.23;ReadPosRankSum=1.596;VQSLOD=1.5515;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:29.65:0,30,244	0/0:7,0:7:20.69:0,21,176	0/0:34,0:25:25.50:0,25,473	0/0:21,0:21:6.97:0,7,227	0/0:17,0:17:35.66:0,36,316	0/0:24,0:24:56.60:0,57,415	0/0:11,0:11:26.80:0,27,196	1/1:11,14:25:47.97:436,48,0	0/0:13,0:13:27.48:0,27,220	0/0:11,0:11:17.78:0,18,134	0/0:5,0:5:11.85:0,12,89	0/0:14,0:14:20.39:0,20,133	0/0:14,0:14:28.51:0,29,240	0/0:10,0:11:27.75:0,28,246	0/0:11,0:11:26.83:0,27,255	0/0:12,0:12:26.62:0,27,246	0/0:19,0:19:50.71:0,51,472	1/1:8,0:8:9.82:27,10,0	0/0:9,0:10:14.86:0,15,115	0/0:12,0:12:14.74:0,15,110	0/0:23,0:24:42.14:0,42,351	0/0:17,0:17:32.75:0,33,248	0/0:20,0:21:41.18:0,41,290	0/0:25,0:25:65.35:0,65,468	0/0:4,0:4:8.79:0,9,65	0/0:12,0:12:1.79:0,2,61	0/0:16,0:16:37.46:0,37,331	0/1:5,0:5:2.91:3,0,12
chr10	61036265	.	TACTATGTGAG	T	1595.97	PASS	AC=2;AF=0.037;AN=54;BaseQRankSum=6.156;DP=242;FS=62.980;HRun=0;HaplotypeScore=76.7463;InbreedingCoeff=0.7060;MQ=88.30;MQ0=0;MQRankSum=-5.475;QD=61.38;ReadPosRankSum=-2.940;VQSLOD=0.4431;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:8:21.06:0,21,984	0/0:5,0:5:15.05:0,15,801	0/0:13,0:12:36.12:0,36,1785	0/0:8,0:8:21.07:0,21,847	0/0:12,0:12:30.10:0,30,1549	0/0:12,0:12:36.11:0,36,1696	0/0:5,0:5:15.03:0,15,575	1/1:8,18:26:54.19:1690,54,0	0/0:6,0:6:18.06:0,18,835	0/0:15,0:15:45.15:0,45,2132	0/0:9,0:9:27.09:0,27,1428	0/0:2,0:2:6.02:0,6,320	0/0:4,0:4:12.04:0,12,639	0/0:3,0:3:9.03:0,9,400	0/0:11,0:11:33.11:0,33,1590	0/0:11,0:11:30.10:0,30,1564	0/0:10,0:10:30.10:0,30,1599	0/0:9,0:9:24.08:0,24,1211	0/0:8,0:8:21.07:0,21,1053	0/0:7,0:7:18.06:0,18,889	0/0:9,0:9:27.09:0,27,1279	0/0:9,0:9:27.09:0,27,1356	0/0:7,0:7:18.06:0,18,846	0/0:4,0:4:12.04:0,12,617	0/0:3,0:3:6.02:0,6,130	0/0:12,0:12:30.10:0,30,1601	0/0:14,0:14:42.14:0,42,2186	./.
chr10	61036771	.	CAAA	C	4359.72	PASS	AB=0.631;AC=34;AF=0.607;AN=56;BaseQRankSum=0.575;DP=433;FS=4.502;HRun=15;HaplotypeScore=74.1952;InbreedingCoeff=0.7818;MQ=75.49;MQ0=4;MQRankSum=-4.135;QD=16.33;ReadPosRankSum=6.594;VQSLOD=3.6467;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:17:9.03:0,9,21	1/1:0,6:7:16.97:198,17,0	0/0:31,0:20:25.94:0,26,364	0/0:20,0:15:16.43:0,16,198	0/1:5,1:12:18.45:18,0,43	0/0:15,0:17:33.02:0,33,417	0/0:10,0:11:27.02:0,27,387	0/0:2,0:2:0:0,0,0	0/1:7,1:17:45.59:46,0,48	1/1:7,14:22:40.42:444,40,0	1/1:3,17:24:41.60:450,42,0	1/1:5,8:13:17.98:202,18,0	1/1:4,5:10:17.89:186,18,0	1/1:1,12:14:25.52:300,26,0	1/1:6,8:15:16.40:199,16,0	1/1:2,4:7:11.93:119,12,0	1/1:4,10:17:32.84:322,33,0	0/0:8,0:11:8.51:0,9,80	1/1:13,5:17:14.96:196,15,0	1/1:1,19:22:40.34:479,40,0	1/1:2,8:12:10.53:156,11,0	0/0:18,0:19:48.11:0,48,694	0/0:23,0:23:45.10:0,45,677	0/0:13,0:13:24.07:0,24,361	1/1:1,11:13:20.97:219,21,0	1/1:1,2:12:32.48:226,32,0	1/1:2,20:26:29.22:493,29,0	1/1:0,0:6:17.65:106,18,0
chr10	61036964	.	A	AAC	28115.07	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=0.523;DP=621;FS=1.983;HRun=0;HaplotypeScore=112.2353;InbreedingCoeff=0.8683;MQ=86.06;MQ0=0;MQRankSum=-10.779;QD=49.07;ReadPosRankSum=5.771;VQSLOD=5.6344;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,13:15:39.13:731,39,0	1/1:3,7:10:18.06:331,18,0	0/0:23,0:23:60.13:0,60,828	0/0:25,0:25:65.10:0,65,847	1/1:3,37:40:99:1930,105,0	1/1:2,20:22:60.20:1093,60,0	1/1:2,11:13:39.13:728,39,0	1/1:3,21:24:72.25:1308,72,0	1/1:2,26:28:75.26:1396,75,0	1/1:5,34:39:99:2155,117,0	1/1:2,20:24:54.19:993,54,0	1/1:3,10:13:33.11:611,33,0	1/1:2,20:22:63.22:1176,63,0	1/1:3,18:21:60.20:1081,60,0	1/1:0,17:17:48.16:896,48,0	1/1:1,14:15:39.13:729,39,0	1/1:1,12:13:30.10:561,30,0	1/1:0,2:2:3.01:56,3,0	1/1:3,23:25:75.23:1316,75,0	1/1:4,37:41:99:2093,114,0	1/1:6,31:37:90.31:1668,90,0	1/1:1,32:34:99:1838,99,0	1/1:1,28:30:81.28:1487,81,0	1/1:1,20:21:45.15:838,45,0	1/1:3,18:21:60.20:1097,60,0	1/1:0,12:13:36.12:674,36,0	1/1:2,24:26:66.23:1215,66,0	1/1:0,6:6:6.02:112,6,0
chr10	61037185	.	A	ATG	778.30	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=-4.147;DP=777;FS=2.654;HRun=0;HaplotypeScore=173.6399;InbreedingCoeff=0.5450;MQ=67.20;MQ0=19;MQRankSum=0.603;QD=13.42;ReadPosRankSum=-7.261;VQSLOD=1.8734;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:40.24:0,40,409	0/0:8,0:8:17.63:0,18,115	0/0:52,0:23:56.98:0,57,895	0/0:68,0:36:79.13:0,79,1227	0/0:25,0:25:9.39:0,9,316	0/0:21,0:21:48.02:0,48,338	0/0:18,0:18:17.82:0,18,231	1/1:7,22:28:45.75:872,46,0	0/0:26,0:26:22.62:0,23,395	0/0:39,0:39:57.01:0,57,507	0/0:30,0:30:2.36:0,2,354	0/0:18,0:18:42.87:0,43,286	0/0:29,0:29:68.12:0,68,498	0/0:24,0:24:68.07:0,68,453	0/0:30,0:30:61.92:0,62,422	0/0:16,0:16:38.44:0,38,268	0/0:23,0:23:37.26:0,37,365	0/0:10,0:10:15.36:0,15,110	0/0:27,0:26:31.17:0,31,298	0/0:35,0:35:85.51:0,86,560	0/0:51,0:51:99:0,109,833	0/0:32,0:32:67.48:0,67,463	0/0:24,0:24:61.97:0,62,409	0/0:31,0:31:55.57:0,56,498	0/0:21,0:21:26.85:0,27,282	0/0:19,0:19:4.37:0,4,222	0/1:29,0:29:1.77:2,0,350	0/0:12,0:12:10.65:0,11,180
chr10	61038395	.	AC	A	889.66	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.748;DP=648;FS=1.596;HRun=2;HaplotypeScore=61.8253;InbreedingCoeff=0.8420;MQ=90.73;MQ0=0;MQRankSum=-1.836;QD=34.22;ReadPosRankSum=-4.155;VQSLOD=2.2506;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,114,1663	0/0:7,0:7:18.05:0,18,252	0/0:39,0:38:99:0,108,1563	0/0:33,0:33:96.28:0,96,1383	0/0:34,0:34:99:0,102,1508	0/0:20,0:20:60.19:0,60,879	0/0:18,0:18:54.16:0,54,771	1/1:0,26:26:78.23:984,78,0	0/0:49,0:49:99:0,147,2203	0/0:25,0:25:72.24:0,72,1078	0/0:21,0:21:60.18:0,60,849	0/0:25,0:25:75.25:0,75,1123	0/0:18,0:18:54.17:0,54,789	0/0:22,0:22:66.22:0,66,987	0/0:14,0:14:42.14:0,42,629	0/0:19,0:19:57.19:0,57,854	0/0:20,0:20:60.20:0,60,898	0/0:7,0:7:21.06:0,21,295	0/0:14,0:14:42.14:0,42,629	0/0:30,0:30:87.29:0,87,1300	0/0:44,0:44:99:0,132,1936	0/0:18,0:18:54.18:0,54,808	0/0:19,0:19:57.19:0,57,853	0/0:22,0:22:66.22:0,66,989	0/0:19,0:19:57.19:0,57,852	0/0:18,0:18:54.17:0,54,791	0/0:28,0:28:84.28:0,84,1259	0/0:1,0:1:3.01:0,3,45
chr10	61038875	.	A	AT	979.52	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-8.466;DP=566;FS=5.661;HRun=7;HaplotypeScore=73.0325;InbreedingCoeff=0.9777;MQ=77.08;MQ0=0;MQRankSum=0.173;QD=27.99;ReadPosRankSum=-5.208;VQSLOD=1.8536;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:54.08:0,54,521	0/0:13,0:13:33.05:0,33,318	0/0:20,0:20:25.05:0,25,356	0/0:10,0:10:14.22:0,14,120	0/0:20,0:20:51.07:0,51,492	0/0:21,0:21:54.08:0,54,521	0/0:12,0:12:30.04:0,30,290	1/1:5,30:35:90.26:1074,90,0	0/0:18,0:18:48.08:0,48,464	0/0:35,0:35:99:0,102,985	0/0:18,0:18:48.02:0,48,454	0/0:18,0:18:48.06:0,48,458	0/0:23,0:23:63.08:0,63,602	0/0:13,0:13:36.04:0,36,342	0/0:28,0:28:72.10:0,72,691	0/0:14,0:14:39.04:0,39,370	0/0:21,0:21:60.07:0,60,572	0/0:13,0:13:39.05:0,39,369	0/0:25,0:25:60.07:0,60,567	0/0:25,0:25:63.09:0,63,603	0/0:13,0:13:39.06:0,39,377	0/0:21,0:21:54.07:0,54,516	0/0:20,0:20:57.09:0,57,550	0/0:9,0:9:27.04:0,27,261	0/0:23,0:23:66.11:0,66,637	0/0:34,0:34:93.14:0,93,898	0/0:30,0:29:84.11:0,84,805	0/0:13,0:13:39.06:0,39,377
chr10	61040925	.	A	ATT	4713.16	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=0.461;DP=611;FS=10.727;HRun=8;HaplotypeScore=110.3159;InbreedingCoeff=0.9637;MQ=60.63;MQ0=1;MQRankSum=3.247;QD=8.08;ReadPosRankSum=3.329;VQSLOD=1.3573;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,0:32:36.94:198,37,0	1/1:3,0:13:22.38:77,22,0	0/0:15,0:11:18.05:0,18,201	0/0:13,0:10:21.05:0,21,233	1/1:5,0:39:51.63:248,52,0	1/1:0,0:20:47.41:163,47,0	1/1:4,0:28:52.40:180,52,0	1/1:8,20:25:48.11:711,48,0	1/1:4,0:23:46.95:161,47,0	1/1:1,0:27:67.37:232,67,0	1/1:1,0:17:39.93:137,40,0	1/1:2,0:19:41.96:143,42,0	1/1:2,0:25:49.91:172,50,0	1/1:2,0:23:49.91:172,50,0	1/1:2,0:15:25.04:96,25,0	1/1:1,0:14:29.94:103,30,0	1/1:3,1:26:47.56:217,48,0	1/1:2,0:15:27.92:95,28,0	1/1:1,0:11:22.46:77,22,0	1/1:1,0:33:74.86:257,75,0	1/1:3,0:15:22.46:77,22,0	1/1:1,0:28:62.86:226,63,0	1/1:2,0:21:44.92:154,45,0	1/1:2,0:20:42.42:146,42,0	1/1:1,0:23:54.90:189,55,0	1/1:3,0:28:62.89:235,63,0	1/1:6,0:33:61.92:214,62,0	1/1:0,0:4:9.98:34,10,0
chr10	61041584	.	A	AT	2002.51	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-9.898;DP=436;FS=2.518;HRun=7;HaplotypeScore=41.6954;InbreedingCoeff=0.9412;MQ=79.15;MQ0=0;MQRankSum=-0.586;QD=26.01;ReadPosRankSum=0.702;VQSLOD=3.9279;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:51.07:0,51,490	0/0:4,0:4:12.02:0,12,116	0/0:18,0:18:41.43:0,41,383	0/0:7,0:7:15.02:0,15,145	0/0:31,0:31:87.14:0,87,840	1/1:4,17:21:51.16:616,51,0	1/1:1,10:11:24.07:290,24,0	0/0:15,0:15:39.06:0,39,376	0/0:17,0:17:39.06:0,39,377	0/0:17,0:17:48.07:0,48,460	0/0:21,0:21:60.08:0,60,575	0/0:9,0:9:27.04:0,27,260	0/0:15,0:15:42.07:0,42,405	0/0:14,0:14:36.06:0,36,348	0/0:14,0:14:36.06:0,36,347	0/0:8,0:8:24.04:0,24,232	0/0:16,0:16:39.05:0,39,376	0/0:10,0:10:24.03:0,24,232	0/0:20,0:20:51.07:0,51,492	0/0:19,0:19:54.07:0,54,516	0/0:19,0:19:54.09:0,54,522	1/1:2,20:22:54.17:652,54,0	1/1:2,13:15:39.12:471,39,0	1/1:2,6:8:12.04:145,12,0	0/0:19,0:19:51.08:0,51,493	0/0:25,0:25:72.12:0,72,695	0/0:20,0:20:57.09:0,57,550	0/0:2,0:2:3:0,3,29
chr10	61041613	.	CT	C	252.97	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.975;DP=408;FS=4.128;HRun=8;HaplotypeScore=46.6031;InbreedingCoeff=0.8162;MQ=76.09;MQ0=0;MQRankSum=-1.294;QD=16.86;ReadPosRankSum=-3.094;VQSLOD=2.7823;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:48.11:0,48,563	0/0:5,0:5:12.04:0,12,145	0/0:20,0:20:47.21:0,47,562	0/0:5,0:5:5.59:0,6,116	0/0:27,0:27:78.24:0,78,942	0/0:14,0:14:39.12:0,39,470	0/0:8,0:8:15.05:0,15,181	1/1:4,11:15:36.05:348,36,0	0/0:15,0:15:33.10:0,33,399	0/0:17,0:17:39.11:0,39,461	0/0:17,0:17:51.15:0,51,606	0/0:12,0:12:36.10:0,36,424	0/0:12,0:12:30.08:0,30,353	0/0:11,0:11:33.10:0,33,399	0/0:11,0:11:30.09:0,30,362	0/0:8,0:8:24.07:0,24,290	0/0:16,0:16:42.11:0,42,491	0/0:14,0:14:39.12:0,39,471	0/0:18,0:18:48.13:0,48,568	0/0:22,0:22:54.17:0,54,652	0/0:16,0:16:42.13:0,42,507	0/0:15,0:15:42.12:0,42,496	0/0:17,0:17:48.11:0,48,563	0/0:10,0:10:27.08:0,27,326	0/0:19,0:19:54.17:0,54,651	0/0:24,0:24:63.19:0,63,760	0/0:20,0:20:54.15:0,54,638	0/0:3,0:3:9.03:0,9,109
chr10	61041648	.	GT	G	632.97	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.626;DP=404;FS=1.900;HRun=2;HaplotypeScore=44.3922;InbreedingCoeff=0.9345;MQ=66.46;MQ0=0;MQRankSum=-0.938;QD=30.14;ReadPosRankSum=-2.927;VQSLOD=2.4299;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:69.23:0,69,1034	0/0:4,0:4:12.04:0,12,177	0/0:20,0:18:29.92:0,30,599	0/0:10,0:10:27.09:0,27,403	0/0:25,0:25:75.25:0,75,1123	0/0:11,0:11:33.11:0,33,494	0/0:8,0:8:21.06:0,21,294	1/1:3,18:21:57.18:728,57,0	0/0:13,0:13:39.13:0,39,585	0/0:12,0:12:36.12:0,36,540	0/0:17,0:17:51.17:0,51,764	0/0:13,0:13:39.11:0,39,562	0/0:10,0:10:30.10:0,30,450	0/0:12,0:12:36.12:0,36,538	0/0:9,0:9:27.08:0,27,388	0/0:10,0:10:30.09:0,30,430	0/0:12,0:12:36.10:0,36,500	0/0:16,0:16:48.16:0,48,719	0/0:15,0:15:42.12:0,42,607	0/0:17,0:17:51.17:0,51,763	0/0:13,0:13:39.13:0,39,582	0/0:16,0:16:48.16:0,48,719	0/0:21,0:21:63.20:0,63,924	0/0:14,0:14:42.13:0,42,610	0/0:18,0:18:54.18:0,54,809	0/0:19,0:19:57.19:0,57,854	0/0:21,0:21:57.19:0,57,854	0/0:4,0:4:12.01:0,12,156
chr10	61041719	.	GC	G	339.80	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.237;DP=393;FS=0.000;HRun=8;HaplotypeScore=42.8347;InbreedingCoeff=0.8727;MQ=72.33;MQ0=0;MQRankSum=-1.408;QD=15.45;ReadPosRankSum=-2.611;VQSLOD=2.4928;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:81.25:0,81,977	0/0:3,0:3:9.03:0,9,109	0/0:17,0:17:18.24:0,18,322	0/0:12,0:11:23.38:0,23,226	0/0:19,0:19:51.15:0,51,605	0/0:9,0:9:27.08:0,27,326	0/0:13,0:13:36.09:0,36,422	1/1:6,16:21:45.07:435,45,0	0/0:9,0:9:21.05:0,21,241	0/0:11,0:11:33.10:0,33,398	0/0:12,0:12:33.10:0,33,398	0/0:9,0:9:27.08:0,27,323	0/0:17,0:17:48.14:0,48,565	0/0:13,0:13:36.11:0,36,435	0/0:12,0:12:36.11:0,36,435	0/0:3,0:3:8.99:0,9,94	0/0:23,0:23:69.18:0,69,799	0/0:19,1:20:29.98:0,30,599	0/0:15,0:15:36.08:0,36,412	0/0:12,0:12:33.10:0,33,398	0/0:13,0:13:33.09:0,33,387	0/0:18,0:18:48.13:0,48,566	0/0:12,0:12:33.10:0,33,395	0/0:22,0:22:66.19:0,66,785	0/0:13,0:14:35.96:0,36,402	0/0:9,0:9:24.07:0,24,289	0/0:17,0:17:42.13:0,42,507	0/0:6,0:6:18.06:0,18,217
chr10	61042881	.	AT	A	10246.02	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=-11.362;DP=580;FS=6.215;HRun=9;HaplotypeScore=67.5463;InbreedingCoeff=0.9601;MQ=58.55;MQ0=2;MQRankSum=1.271;QD=22.23;ReadPosRankSum=1.654;VQSLOD=5.8570;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,36:39:93.05:851,93,0	1/1:0,9:9:21.01:192,21,0	0/0:17,1:14:19.73:0,20,253	0/0:14,0:6:12.04:0,12,138	1/1:2,31:34:89.08:802,89,0	0/0:18,0:18:48.14:0,48,554	0/0:15,0:15:36.08:0,36,394	1/1:6,18:23:39:357,39,0	1/1:0,24:24:72.04:659,72,0	1/1:2,16:18:48.02:439,48,0	1/1:1,11:12:27.01:247,27,0	1/1:2,11:14:29.05:253,29,0	1/1:3,15:18:39.01:357,39,0	1/1:0,12:12:30:275,30,0	1/1:3,20:23:51.02:467,51,0	1/1:1,17:18:48.03:439,48,0	1/1:5,29:34:78.04:714,78,0	1/1:5,34:39:96.04:879,96,0	1/1:6,12:17:35.99:323,36,0	1/1:2,15:17:45.02:412,45,0	1/1:1,23:24:63.03:577,63,0	0/0:13,0:13:36.11:0,36,415	0/0:15,1:16:20.67:0,21,492	0/0:24,0:24:66.15:0,66,747	1/1:3,27:30:81.03:741,81,0	1/1:2,23:25:66.03:604,66,0	1/1:2,26:28:69.04:631,69,0	1/1:0,1:1:3:27,3,0
chr10	61043566	.	GTC	G	3050.45	PASS	AB=0.988;AC=37;AF=0.712;AN=52;BaseQRankSum=-5.298;DP=390;FS=21.474;HRun=0;HaplotypeScore=74.1128;InbreedingCoeff=0.0942;MQ=61.63;MQ0=20;MQRankSum=-0.508;QD=11.26;ReadPosRankSum=1.966;VQSLOD=1.6187;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:24:29.76:257,30,0	0/1:4,0:4:8.09:61,0,8	0/0:47,0:14:32.60:0,33,242	0/0:45,0:17:23.20:0,23,333	1/1:15,0:15:16.10:144,16,0	1/1:0,20:20:12.04:147,12,0	1/1:4,0:4:8.99:76,9,0	1/1:12,0:11:26.78:195,27,0	1/1:11,1:11:15.42:124,15,0	0/1:6,0:6:2.73:79,0,3	1/1:11,0:11:16.77:138,17,0	1/1:9,0:8:18.02:179,18,0	1/1:9,0:9:14.53:242,15,0	1/1:8,1:9:16.94:179,17,0	1/1:13,0:13:2.02:100,2,0	0/1:11,0:11:35.19:42,0,35	0/1:19,0:19:63.87:182,0,64	0/1:7,1:8:26.21:89,0,26	0/1:8,0:8:47.24:63,0,47	0/1:14,0:14:1.13:121,0,1	0/1:24,0:23:19.38:222,0,19	0/0:3,7:9:0:0,0,0	./.	./.	1/1:11,0:11:13.43:122,13,0	1/1:9,1:10:26.80:255,27,0	0/1:14,0:13:74.45:74,0,83	1/1:4,0:4:12:114,12,0
chr10	61043634	.	TATATATA	T	599.33	PASS	AB=1.000;AC=18;AF=0.346;AN=52;BaseQRankSum=0.359;DP=234;FS=0.000;HRun=0;HaplotypeScore=72.1869;InbreedingCoeff=0.1708;MQ=50.01;MQ0=4;MQRankSum=-2.468;QD=6.51;ReadPosRankSum=0.208;VQSLOD=1.5454;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:2.74:0,3,48	0/0:2,0:2:2.99:0,3,23	0/0:6,0:2:3.01:0,3,53	0/0:8,0:3:4.12:0,4,18	0/0:10,0:10:0:0,0,0	1/1:11,7:18:25.77:183,26,0	1/1:0,1:1:3.01:57,3,0	0/0:29,0:20:58.82:0,59,1114	0/1:9,0:9:34.40:35,0,34	0/1:7,0:7:42.06:76,0,42	0/0:6,0:6:3.01:0,3,38	0/0:5,0:5:2.68:0,3,11	1/1:6,0:6:2.39:43,2,0	0/0:8,0:7:11.94:0,12,98	./.	0/0:6,0:6:2.96:0,3,62	0/0:11,0:11:1.48:0,1,33	0/0:7,0:7:6.01:0,6,57	0/1:13,0:13:99:99,0,220	0/1:2,0:2:0:0,0,0	0/0:7,0:7:0:0,0,0	1/1:3,1:4:8.93:63,9,0	1/1:4,1:5:5.91:40,6,0	1/1:2,0:2:5.47:30,5,0	./.	0/1:14,0:13:76.80:77,0,179	0/1:11,0:11:18.79:38,0,19	0/0:2,0:2:2.98:0,3,22
chr10	61046825	.	TG	T	111.48	PASS	AC=4;AF=0.67;AN=6;BaseQRankSum=0.000;DP=329;FS=0.000;HRun=3;HaplotypeScore=19.0331;MQ=7.13;MQ0=264;MQRankSum=1.159;QD=3.48;ReadPosRankSum=-0.361;VQSLOD=-0.4378;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	1/1:5,2:3:3.01:37,3,0	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	1/1:17,8:9:12.04:148,12,0	./.	./.	0/0:14,0:4:12.04:0,12,172	./.	./.	./.	./.	./.
chr10	61047589	.	AG	A	4384.59	PASS	AC=40;AF=0.741;AN=54;BaseQRankSum=6.777;DP=355;FS=1.342;HRun=1;HaplotypeScore=34.5421;InbreedingCoeff=0.8426;MQ=32.04;MQ0=93;MQRankSum=0.902;QD=21.81;ReadPosRankSum=2.597;VQSLOD=4.9978;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,13:11:30.05:344,30,0	1/1:2,3:2:6.02:72,6,0	0/0:34,0:2:3.01:0,3,34	0/0:38,0:3:6.02:0,6,73	1/1:0,7:5:12.04:144,12,0	0/0:14,0:8:15.05:0,15,238	0/0:12,0:8:18.06:0,18,286	./.	1/1:1,7:6:18.06:216,18,0	1/1:2,8:8:3.09:230,3,0	1/1:3,10:9:27.08:324,27,0	1/1:1,5:5:15.05:180,15,0	1/1:1,9:5:12.04:144,12,0	1/1:0,12:11:30.09:359,30,0	1/1:2,11:9:27.08:324,27,0	1/1:0,6:4:12.04:144,12,0	1/1:0,7:6:15.05:180,15,0	1/1:3,7:8:9.03:108,9,0	1/1:10,4:3:9.03:108,9,0	1/1:0,14:13:33.10:396,33,0	1/1:0,8:6:18.06:216,18,0	0/0:21,0:15:42.14:0,42,667	0/0:18,0:14:30.10:0,30,477	0/0:12,0:10:27.09:0,27,429	1/1:4,10:7:18.06:216,18,0	1/1:2,9:8:21.06:252,21,0	1/1:1,10:7:21.06:251,21,0	1/1:0,9:5:15.05:180,15,0
chr10	61054502	.	CA	C	2340.12	PASS	AC=36;AF=1.000;AN=36;DP=200;FS=0.000;HRun=1;HaplotypeScore=74.9737;InbreedingCoeff=-0.0408;MQ=24.11;MQ0=4;QD=14.27;VQSLOD=2.9827;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,13:9:8.97:70,9,0	1/1:0,6:2:5.99:47,6,0	./.	./.	1/1:0,11:6:11.98:98,12,0	1/1:0,7:7:14.97:119,15,0	1/1:0,5:3:2.99:24,3,0	./.	1/1:0,9:8:20.96:173,21,0	1/1:0,8:6:17.89:130,18,0	./.	1/1:0,9:8:23.94:188,24,0	1/1:0,12:11:26.90:208,27,0	1/1:0,9:8:23.94:191,24,0	1/1:1,16:17:44.91:359,45,0	1/1:1,12:12:29.93:237,30,0	./.	./.	1/1:0,2:2:5.97:44,6,0	./.	./.	1/1:0,7:1:3:25,3,0	./.	1/1:0,1:1:3:26,3,0	./.	1/1:0,12:7:20.88:152,21,0	1/1:0,11:10:26.93:211,27,0	1/1:0,11:7:14.94:114,15,0
chr10	61054513	.	AT	A	3082.26	PASS	AC=38;AF=1.000;AN=38;DP=224;FS=0.000;HRun=1;HaplotypeScore=77.1856;InbreedingCoeff=-0.0349;MQ=24.44;MQ0=1;QD=15.89;VQSLOD=3.5428;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,17:12:26.96:221,27,0	1/1:0,6:2:5.99:48,6,0	./.	./.	1/1:1,10:6:17.98:149,18,0	1/1:0,7:7:20.95:168,21,0	1/1:0,6:3:3:25,3,0	./.	1/1:0,11:10:23.94:189,24,0	1/1:0,10:8:23.88:179,24,0	./.	1/1:0,10:9:26.94:217,27,0	1/1:0,14:13:32.94:266,33,0	1/1:0,9:8:23.97:197,24,0	1/1:0,21:21:59.91:492,60,0	1/1:0,15:15:38.91:309,39,0	./.	./.	1/1:0,3:3:8.95:66,9,0	./.	./.	1/1:0,7:1:3:25,3,0	./.	1/1:0,2:2:5.99:50,6,0	1/1:0,8:1:2.99:24,3,0	1/1:0,14:8:23.86:179,24,0	1/1:0,11:10:29.91:236,30,0	1/1:1,11:8:14.96:118,15,0
chr10	61056388	.	CT	C	3212.89	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=10.251;DP=980;FS=0.408;HRun=2;HaplotypeScore=97.1159;InbreedingCoeff=1.0000;MQ=73.77;MQ0=0;MQRankSum=-0.320;QD=34.18;ReadPosRankSum=1.524;VQSLOD=3.7086;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,135,1962	0/0:21,0:21:60.20:0,60,898	0/0:29,0:29:81.24:0,81,1172	0/0:20,0:20:54.17:0,54,775	0/0:42,0:42:99:0,126,1859	1/1:0,25:25:72.23:935,72,0	1/1:0,12:12:36.12:467,36,0	0/0:32,0:32:93.28:0,93,1323	0/0:44,0:44:99:0,132,1937	0/0:57,0:57:99:0,169,2480	0/0:49,0:49:99:0,138,2022	0/0:30,0:30:90.30:0,90,1347	0/0:31,0:31:93.30:0,93,1357	0/0:50,0:50:99:0,150,2218	0/0:33,0:33:96.30:0,96,1399	0/0:26,0:26:78.25:0,78,1149	0/0:36,0:36:99:0,102,1495	0/0:27,0:27:81.26:0,81,1185	0/0:38,0:38:99:0,114,1652	0/0:52,0:51:99:0,144,2137	0/0:37,0:37:99:0,111,1662	1/1:0,18:18:51.17:662,51,0	1/1:1,23:24:57.19:740,57,0	1/1:0,15:15:45.15:584,45,0	0/0:34,0:34:96.33:0,96,1439	0/0:45,0:45:99:0,129,1870	0/0:65,0:64:99:0,196,2889	0/0:37,0:37:90.73:0,91,1349
chr10	61117205	.	ATG	A	179.38	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-0.932;DP=290;FS=11.630;HRun=0;HaplotypeScore=53.2814;InbreedingCoeff=0.3654;MQ=49.93;MQ0=15;MQRankSum=-0.396;QD=16.31;ReadPosRankSum=-1.424;VQSLOD=1.9682;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:6:3.01:0,3,36	0/0:6,0:6:15.05:0,15,191	0/0:27,0:18:54.18:0,54,894	0/0:21,0:13:39.13:0,39,622	0/0:9,0:8:6.02:0,6,90	0/0:7,0:7:9.03:0,9,126	0/0:13,0:12:24.07:0,24,324	1/1:4,7:9:21.07:270,21,0	0/0:8,0:8:18.05:0,18,261	0/0:15,0:14:35.63:0,36,607	0/0:16,0:15:12.04:0,12,159	0/0:6,0:6:12.04:0,12,163	0/0:6,0:6:14.92:0,15,147	0/0:8,0:8:3.01:0,3,54	0/0:8,0:7:6.02:0,6,83	0/0:6,0:4:6.02:0,6,72	0/0:12,0:12:15.05:0,15,207	0/0:2,0:2:2.22:0,2,7	0/0:16,0:14:39.09:0,39,533	0/0:10,0:9:9.03:0,9,134	0/0:14,0:13:15.05:0,15,228	0/0:8,0:8:6.02:0,6,83	0/0:7,0:6:3.01:0,3,39	0/0:4,0:3:2.84:0,3,14	0/0:16,0:16:24.07:0,24,304	0/0:10,0:10:30.10:0,30,454	0/0:13,0:13:21.06:0,21,328	0/0:4,0:4:9.03:0,9,131
chr10	61117310	.	T	TATC	940.40	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-1.469;DP=399;FS=15.072;HRun=0;HaplotypeScore=127.0085;InbreedingCoeff=0.8718;MQ=94.77;MQ0=40;MQRankSum=-6.555;QD=42.75;ReadPosRankSum=-3.700;VQSLOD=2.9072;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:9:24.08:0,24,409	0/0:4,0:4:12.04:0,12,204	0/0:33,0:33:90.75:0,91,1489	0/0:25,0:25:66.21:0,66,1071	0/0:19,0:15:39.13:0,39,664	0/0:11,0:9:27.08:0,27,434	0/0:13,0:12:30.10:0,30,511	1/1:10,12:20:56.92:1035,57,0	0/0:12,0:11:27.08:0,27,434	0/0:22,0:21:63.22:0,63,1074	0/0:18,0:13:33.11:0,33,562	0/0:14,0:13:39.12:0,39,639	0/0:13,0:11:33.11:0,33,563	0/0:9,0:9:27.09:0,27,450	0/0:20,0:18:54.18:0,54,920	0/0:8,0:7:21.06:0,21,333	0/0:13,0:7:15.05:0,15,256	0/0:6,0:6:15.05:0,15,255	0/0:16,0:14:39.02:0,39,635	0/0:10,0:9:24.07:0,24,383	0/0:23,0:18:48.16:0,48,818	0/0:5,0:4:9.03:0,9,153	0/0:8,0:8:21.07:0,21,358	0/0:18,0:17:45.11:0,45,736	0/0:14,0:11:33.11:0,33,563	0/0:11,0:10:27.09:0,27,460	0/0:13,0:11:33.11:0,33,562	0/0:6,0:6:18.06:0,18,306
chr10	61117317	.	C	CAA	919.78	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-4.442;DP=432;FS=28.214;HRun=4;HaplotypeScore=133.5485;InbreedingCoeff=0.9107;MQ=86.44;MQ0=36;MQRankSum=-5.473;QD=38.32;ReadPosRankSum=-3.766;VQSLOD=1.0360;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:11:27.08:0,27,360	0/0:4,0:4:12.04:0,12,160	0/0:30,0:31:62.59:0,63,942	0/0:29,0:28:72.18:0,72,933	0/0:19,0:16:48.16:0,48,639	0/0:11,0:9:27.08:0,27,345	0/0:14,0:13:33.11:0,33,440	1/1:5,17:23:60.12:1015,60,0	0/0:17,0:16:42.13:0,42,559	0/0:21,0:21:63.21:0,63,840	0/0:20,0:15:36.11:0,36,480	0/0:17,0:16:42.13:0,42,560	0/0:14,0:12:33.11:0,33,440	0/0:11,0:11:33.09:0,33,423	0/0:20,0:18:54.18:0,54,720	0/0:9,0:8:24.08:0,24,320	0/0:13,0:7:15.05:0,15,200	0/0:8,0:8:18.02:0,18,221	0/0:19,0:16:42.11:0,42,543	0/0:14,0:13:39.11:0,39,501	0/0:23,0:18:48.16:0,48,639	0/0:6,0:5:12.04:0,12,160	0/0:8,0:8:21.07:0,21,280	0/0:19,0:18:45.12:0,45,582	0/0:14,0:12:33.11:0,33,440	0/0:10,0:10:27.09:0,27,360	0/0:14,0:12:36.10:0,36,464	0/0:8,0:8:24.02:0,24,283
chr10	61117566	.	C	CA	13426.29	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-2.697;DP=529;FS=7.727;HRun=6;HaplotypeScore=57.1273;InbreedingCoeff=0.9847;MQ=72.51;MQ0=0;MQRankSum=-1.217;QD=29.32;ReadPosRankSum=6.698;VQSLOD=4.6274;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,23:26:21.27:556,21,0	1/1:0,9:9:24.08:302,24,0	0/0:22,0:20:38.19:0,38,391	0/0:19,0:18:13.11:0,13,248	1/1:1,19:20:48.12:587,48,0	1/1:4,22:26:63.20:792,63,0	1/1:0,9:10:24.08:300,24,0	0/0:30,0:30:72.15:0,72,730	1/1:2,22:24:54.17:678,54,0	1/1:5,24:29:75.21:915,75,0	1/1:1,16:17:39.12:491,39,0	1/1:1,11:12:24.08:302,24,0	1/1:2,14:16:36.12:453,36,0	1/1:1,14:15:33.11:415,33,0	1/1:1,17:18:48.15:604,48,0	1/1:1,17:18:45.14:566,45,0	1/1:2,10:12:24.08:302,24,0	1/1:2,10:12:24.08:302,24,0	1/1:5,25:30:75.23:931,75,0	1/1:3,19:22:51.16:641,51,0	1/1:2,8:10:24.08:302,24,0	1/1:3,20:23:45.10:548,45,0	1/1:1,24:25:60.19:755,60,0	1/1:1,11:12:33.11:415,33,0	1/1:2,14:16:30.10:377,30,0	1/1:0,14:14:42.10:498,42,0	1/1:0,31:31:84.03:1056,84,0	1/1:0,11:11:27.09:340,27,0
chr10	61117729	.	TTCTCTA	T	313.79	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.582;DP=511;FS=2.530;HRun=0;HaplotypeScore=129.8771;InbreedingCoeff=0.9771;MQ=81.17;MQ0=1;MQRankSum=-4.061;QD=18.46;ReadPosRankSum=-2.693;VQSLOD=2.8424;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:8:24.08:0,24,833	0/0:9,0:9:24.07:0,24,794	0/0:20,0:20:57.17:0,57,1929	0/0:20,0:20:60.20:0,60,1580	0/0:23,0:23:69.24:0,69,2487	0/0:20,0:20:57.18:0,57,1816	0/0:9,0:9:27.09:0,27,937	1/1:12,5:16:33.26:408,33,0	0/0:25,0:25:72.22:0,72,2339	0/0:26,0:26:75.24:0,75,2442	0/0:30,0:30:90.27:0,90,3058	0/0:9,0:9:27.09:0,27,905	0/0:19,0:19:54.18:0,54,1906	0/0:22,0:22:66.23:0,66,2316	0/0:12,0:12:36.11:0,36,1202	0/0:21,0:21:63.22:0,63,2277	0/0:19,0:19:57.20:0,57,2025	0/0:22,0:22:60.20:0,60,2058	0/0:20,0:20:54.18:0,54,1759	0/0:34,0:34:96.33:0,96,3384	0/0:13,0:13:39.11:0,39,1329	0/0:22,0:22:66.21:0,66,2319	0/0:13,0:13:39.13:0,39,1343	0/0:5,0:5:15.05:0,15,455	0/0:13,0:13:39.13:0,39,1367	0/0:22,0:22:66.23:0,66,2420	0/0:29,0:29:87.30:0,87,3100	0/0:9,0:9:27.09:0,27,971
chr10	61117734	.	TA	T	373.15	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.690;DP=504;FS=2.301;HRun=1;HaplotypeScore=70.8909;InbreedingCoeff=0.9621;MQ=81.57;MQ0=1;MQRankSum=-2.579;QD=24.88;ReadPosRankSum=-2.929;VQSLOD=2.8600;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:8:24.08:0,24,383	0/0:7,0:7:21.07:0,21,336	0/0:19,0:19:57.18:0,57,873	0/0:17,0:17:51.17:0,51,767	0/0:26,0:26:78.24:0,78,1220	0/0:19,0:19:54.15:0,54,815	0/0:9,0:9:27.07:0,27,408	1/1:5,10:14:42.05:468,42,0	0/0:23,0:23:66.20:0,66,1031	0/0:23,0:23:69.23:0,69,1083	0/0:30,0:30:90.28:0,90,1388	0/0:11,0:11:33.11:0,33,527	0/0:18,0:18:54.17:0,54,840	0/0:21,0:21:63.20:0,63,984	0/0:12,0:12:36.11:0,36,550	0/0:24,0:24:72.23:0,72,1122	0/0:18,0:18:54.18:0,54,862	0/0:23,0:23:57.19:0,57,905	0/0:19,0:19:54.18:0,54,832	0/0:35,0:35:99:0,105,1607	0/0:12,0:12:36.12:0,36,572	0/0:21,0:21:63.21:0,63,1005	0/0:13,0:13:39.12:0,39,597	0/0:4,0:4:12.04:0,12,192	0/0:13,0:13:39.13:0,39,623	0/0:24,0:24:72.25:0,72,1150	0/0:31,0:31:90.29:0,90,1415	0/0:9,0:9:27.09:0,27,431
chr10	61118054	.	G	GA	2200.62	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-7.416;DP=500;FS=6.503;HRun=6;HaplotypeScore=81.9525;InbreedingCoeff=0.9948;MQ=84.31;MQ0=0;MQRankSum=-0.033;QD=32.36;ReadPosRankSum=1.469;VQSLOD=3.8917;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:39.07:0,39,391	0/0:6,0:6:18.04:0,18,184	0/0:18,0:18:42.05:0,42,418	0/0:15,0:15:24.02:0,24,241	0/0:27,0:26:72.16:0,72,734	1/1:1,23:24:69.22:868,69,0	1/1:2,16:18:45.14:566,45,0	0/0:30,0:30:63.05:0,63,633	0/0:12,0:12:36.08:0,36,367	0/0:21,0:21:60.12:0,60,602	0/0:18,0:18:54.12:0,54,551	0/0:10,0:10:30.07:0,30,306	0/0:16,0:16:42.08:0,42,421	0/0:9,0:9:27.06:0,27,275	0/0:18,0:18:54.11:0,54,544	0/0:15,0:15:45.09:0,45,452	0/0:23,0:23:60.10:0,60,602	0/0:21,0:21:57.10:0,57,572	0/0:30,0:30:72.15:0,72,734	0/0:28,0:28:78.16:0,78,788	0/0:18,0:17:42.09:0,42,428	1/1:1,8:9:27.09:338,27,0	1/1:1,9:10:27.09:340,27,0	1/1:0,7:7:21.07:264,21,0	0/0:7,0:7:21.05:0,21,214	0/0:16,0:16:42.08:0,42,421	0/0:32,0:31:93.21:0,93,949	0/0:26,0:26:75.17:0,75,765
chr10	61120446	.	G	GAA	14241.40	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-12.503;DP=584;FS=0.000;HRun=8;HaplotypeScore=78.6068;InbreedingCoeff=0.9672;MQ=71.33;MQ0=5;MQRankSum=-1.786;QD=31.93;ReadPosRankSum=1.591;VQSLOD=4.9276;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,12:14:26.49:350,26,0	1/1:0,6:5:15.05:238,15,0	0/0:15,0:15:11.55:0,12,215	0/0:10,0:10:16.32:0,16,144	1/1:3,31:36:89.16:1257,89,0	0/0:23,0:22:66.18:0,66,733	0/0:5,0:6:12.02:0,12,134	0/0:4,0:26:42.65:0,43,188	1/1:3,19:23:42.10:639,42,0	1/1:5,20:26:69.20:1067,69,0	1/1:5,25:31:77.66:1143,78,0	1/1:4,11:16:21.07:333,21,0	1/1:2,20:25:53.15:779,53,0	1/1:6,10:19:39.09:554,39,0	1/1:1,15:16:33.11:524,33,0	1/1:5,9:21:29.24:541,29,0	1/1:8,8:18:8.72:274,9,0	1/1:3,14:17:30.10:476,30,0	1/1:10,13:23:51.16:782,51,0	1/1:5,32:37:93.23:1401,93,0	1/1:1,11:11:27.09:429,27,0	0/0:28,0:28:75.18:0,75,827	0/0:22,0:22:57.13:0,57,625	0/0:6,0:6:12.03:0,12,134	1/1:8,18:27:72.21:1070,72,0	1/1:2,26:28:78.20:1149,78,0	1/1:8,22:35:53.71:856,54,0	1/1:2,10:12:24.08:381,24,0
chr10	61120992	.	G	GCCCAT	335.86	PASS	AC=2;AF=1.00;AN=2;DP=5;FS=0.000;HRun=0;HaplotypeScore=23.6365;MQ=227.69;MQ0=0;QD=83.97;VQSLOD=4.8501;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	1/1:0,3:1:12.04:398,12,0	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.
chr10	61124712	.	G	GT	18959.01	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-5.605;DP=568;FS=3.782;HRun=4;HaplotypeScore=53.2570;InbreedingCoeff=0.9741;MQ=61.62;MQ0=1;MQRankSum=-4.557;QD=35.37;ReadPosRankSum=5.194;VQSLOD=4.9143;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,12:14:36.03:468,36,0	1/1:0,5:5:12.04:164,12,0	0/0:17,0:15:36.10:0,36,408	0/0:15,0:15:36.09:0,36,397	1/1:1,29:30:81.05:1036,81,0	1/1:1,18:19:51.10:675,51,0	1/1:2,14:16:36.12:492,36,0	1/1:2,34:36:99:1288,99,0	1/1:2,16:18:48.16:657,48,0	1/1:0,26:26:78.26:1067,78,0	1/1:4,23:26:63.14:837,63,0	1/1:3,12:15:33.11:451,33,0	1/1:1,17:18:51.17:698,51,0	1/1:0,15:15:42.14:575,42,0	1/1:1,19:20:57.19:780,57,0	1/1:2,14:16:36.12:492,36,0	1/1:1,30:31:87.29:1189,87,0	1/1:0,12:12:30.10:410,30,0	1/1:1,13:13:36.11:477,36,0	1/1:0,25:25:69.23:940,69,0	1/1:0,16:16:42.14:575,42,0	1/1:2,26:28:63.13:819,63,0	1/1:1,37:38:99:1367,105,0	1/1:1,13:14:22.23:400,22,0	1/1:0,26:26:75.25:1025,75,0	1/1:0,22:22:66.21:886,66,0	1/1:3,27:30:72.24:985,72,0	1/1:0,5:5:15.05:205,15,0
chr10	61125517	.	G	GT	776.29	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-5.607;DP=670;FS=4.911;HRun=6;HaplotypeScore=62.4268;InbreedingCoeff=0.9323;MQ=60.26;MQ0=7;MQRankSum=-1.463;QD=22.83;ReadPosRankSum=-3.215;VQSLOD=1.9915;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:50:99:0,138,1406	0/0:10,0:10:27.06:0,27,275	0/0:19,0:12:21.04:0,21,210	0/0:14,0:13:17.49:0,17,207	0/0:37,0:37:99:0,105,1063	0/0:24,0:24:63.09:0,63,625	0/0:25,0:25:66.13:0,66,663	1/1:11,23:32:72.17:871,72,0	0/0:25,0:25:57.13:0,57,581	0/0:28,0:28:78.11:0,78,775	0/0:29,0:29:81.15:0,81,807	0/0:15,0:15:45.10:0,45,459	0/0:21,0:21:48.09:0,48,482	0/0:20,0:19:51.11:0,51,520	0/0:27,0:27:78.12:0,78,778	0/0:19,0:19:48.11:0,48,490	0/0:29,0:29:69.15:0,69,702	0/0:9,0:9:9.02:0,9,196	0/0:18,0:16:45.10:0,45,459	0/0:32,0:32:90.17:0,90,905	0/0:25,0:24:66.15:0,66,672	0/0:16,0:16:48.11:0,48,490	0/0:33,0:33:81.18:0,81,826	0/0:19,0:19:57.11:0,57,573	0/0:25,0:24:72.16:0,72,734	0/0:19,0:19:51.10:0,51,515	0/0:34,0:34:84.18:0,84,857	0/0:13,0:13:33.07:0,33,337
chr10	61131082	.	T	TA	1077.30	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=0.523;DP=745;FS=31.377;HRun=1;HaplotypeScore=71.3013;InbreedingCoeff=0.9998;MQ=75.62;MQ0=0;MQRankSum=-3.147;QD=38.47;ReadPosRankSum=-4.004;VQSLOD=0.6680;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,153,1985	0/0:12,0:12:36.10:0,36,452	0/0:26,0:26:72.17:0,72,878	0/0:40,0:39:99:0,114,1408	0/0:22,0:22:63.19:0,63,803	0/0:17,0:17:48.13:0,48,606	0/0:25,0:25:72.22:0,72,921	1/1:1,27:28:81.25:1172,81,0	0/0:28,0:28:84.27:0,84,1090	0/0:31,0:31:93.30:0,93,1208	0/0:20,0:20:54.17:0,54,688	0/0:19,0:19:57.17:0,57,726	0/0:20,0:20:60.18:0,60,764	0/0:25,0:25:66.20:0,66,842	0/0:39,0:39:99:0,114,1438	0/0:28,0:28:84.27:0,84,1090	0/0:19,0:19:57.17:0,57,724	0/0:16,0:16:48.11:0,48,599	0/0:17,0:17:48.16:0,48,623	0/0:33,0:33:93.21:0,93,1188	0/0:42,0:42:99:0,123,1563	0/0:35,0:35:99:0,99,1250	0/0:20,0:20:60.17:0,60,763	0/0:27,0:27:81.26:0,81,1052	0/0:27,0:27:81.25:0,81,1037	0/0:34,0:34:99:0,102,1299	0/0:28,0:28:78.22:0,78,982	0/0:16,0:16:48.16:0,48,623
chr10	61139178	.	AT	A	1056.26	PASS	AB=0.538;AC=25;AF=0.735;AN=34;BaseQRankSum=1.264;DP=260;FS=6.083;HRun=2;HaplotypeScore=33.6476;InbreedingCoeff=0.5362;MQ=47.33;MQ0=96;MQRankSum=-4.128;QD=10.67;ReadPosRankSum=7.190;VQSLOD=1.4097;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:4,5:7:2.96:0,3,19	1/1:0,6:1:3:27,3,0	0/0:30,0:20:53.47:0,53,689	0/0:20,0:9:27.03:0,27,354	1/1:0,15:9:23.94:190,24,0	1/1:0,9:6:14.99:125,15,0	./.	0/0:76,0:2:6.02:0,6,74	./.	1/1:1,10:4:12.01:109,12,0	1/1:2,12:9:23.95:191,24,0	./.	1/1:0,6:5:6:50,6,0	1/1:1,2:2:3:26,3,0	1/1:1,3:2:5.99:49,6,0	1/1:0,6:4:5.99:50,6,0	./.	./.	./.	./.	./.	1/1:1,7:4:11.97:95,12,0	1/1:0,6:6:14.97:119,15,0	1/1:1,3:3:3:27,3,0	0/1:1,6:7:20.94:129,0,21	./.	./.	./.
chr10	61139181	.	CA	C	1077.91	PASS	AB=0.538;AC=27;AF=0.794;AN=34;BaseQRankSum=2.312;DP=183;FS=3.166;HRun=2;HaplotypeScore=33.6014;InbreedingCoeff=0.4578;MQ=56.42;MQ0=19;MQRankSum=-4.724;QD=10.89;ReadPosRankSum=7.026;VQSLOD=1.6685;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:4,5:7:0.47:0,0,1	1/1:0,6:1:3:27,3,0	0/0:34,0:20:56.76:0,57,754	0/0:22,0:9:26.84:0,27,331	1/1:0,15:9:23.94:191,24,0	1/1:0,9:6:14.99:125,15,0	./.	1/1:6,0:2:3.11:8,3,0	./.	1/1:1,10:4:12.01:109,12,0	1/1:0,12:9:23.86:191,24,0	./.	1/1:0,6:5:6:50,6,0	1/1:0,2:2:3:26,3,0	1/1:0,3:2:5.99:50,6,0	1/1:0,6:4:5.99:50,6,0	./.	./.	./.	./.	./.	1/1:0,7:4:11.97:95,12,0	1/1:0,6:6:14.97:119,15,0	1/1:0,3:3:3:27,3,0	0/1:1,6:7:21.94:130,0,22	./.	./.	./.
chr10	61144597	.	GTA	G	132.80	PASS	AB=0.812;AC=6;AF=0.111;AN=54;BaseQRankSum=7.794;DP=301;FS=19.484;HRun=0;HaplotypeScore=62.4363;InbreedingCoeff=-0.1463;MQ=67.49;MQ0=0;MQRankSum=-5.369;QD=2.04;ReadPosRankSum=3.200;VQSLOD=-0.0407;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,1:35:76.47:0,76,1858	0/0:3,0:3:9.03:0,9,182	0/0:15,0:15:39.14:0,39,805	0/0:10,0:10:30.10:0,30,610	0/1:7,8:15:99:157,0,282	0/0:10,0:9:30.10:0,30,604	0/0:5,0:5:15.05:0,15,304	./.	0/1:4,1:5:11.70:12,0,191	0/1:18,2:20:3.27:3,0,1029	0/0:9,1:10:5.30:0,5,479	0/0:6,0:6:18.06:0,18,365	0/0:16,0:16:45.15:0,45,912	0/0:9,0:9:27.09:0,27,547	0/0:14,0:14:42.14:0,42,851	0/0:12,1:13:11.39:0,11,667	0/0:7,1:8:20.92:0,21,424	0/0:11,0:11:33.11:0,33,668	0/0:9,0:9:27.09:0,27,548	0/1:3,1:4:14.69:15,0,170	0/0:17,0:17:48.16:0,48,970	0/0:2,0:2:6.02:0,6,122	0/1:10,2:12:33.94:34,0,454	0/0:12,1:13:7.13:0,7,581	0/1:7,2:9:26.44:26,0,358	0/0:10,1:11:1.39:0,1,543	0/0:15,0:15:42.14:0,42,852	0/0:4,0:4:12.04:0,12,207
chr10	61145945	.	CA	C	1101.85	PASS	AB=0.825;AC=10;AF=0.185;AN=54;BaseQRankSum=-9.197;DP=484;FS=2.451;HRun=11;HaplotypeScore=101.3057;InbreedingCoeff=0.7031;MQ=74.60;MQ0=8;MQRankSum=-0.484;QD=9.84;ReadPosRankSum=0.142;VQSLOD=3.0478;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:30.37:0,30,138	0/0:11,0:11:21.96:0,22,98	0/1:28,0:20:2.89:3,0,109	0/0:22,0:11:3.86:0,4,90	0/0:33,0:33:63.86:0,64,276	1/1:4,9:13:20.96:172,21,0	1/1:3,12:15:1.98:229,2,0	./.	0/0:14,0:14:30.19:0,30,135	0/0:24,0:24:62.56:0,63,275	0/0:29,0:30:66.71:0,67,326	0/0:7,0:7:16.47:0,16,74	0/0:8,0:8:5.49:0,5,25	0/0:19,0:19:35.73:0,36,159	0/0:15,0:15:30.19:0,30,135	0/0:11,0:10:21.96:0,22,98	0/0:13,0:13:26.89:0,27,122	0/0:10,0:10:18.85:0,19,84	0/0:18,0:17:41.17:0,41,184	0/0:23,0:23:47.54:0,48,211	0/0:12,0:12:21.96:0,22,98	1/1:5,16:22:22.29:304,22,0	0/1:7,6:13:5.81:152,0,6	1/1:2,18:20:47.73:394,48,0	0/0:16,0:16:25.59:0,26,112	0/0:20,0:19:46.79:0,47,210	0/0:30,0:30:61.27:0,61,271	0/0:18,0:18:43.91:0,44,196
chr10	61145951	.	A	AAT	13511.34	PASS	AC=40;AF=0.741;AN=54;BaseQRankSum=-12.412;DP=501;FS=9.540;HRun=0;HaplotypeScore=71.4111;InbreedingCoeff=0.9339;MQ=73.03;MQ0=8;MQRankSum=-0.065;QD=37.02;ReadPosRankSum=2.887;VQSLOD=6.9917;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,13:16:35.95:541,36,0	1/1:0,12:13:24.07:407,24,0	0/0:33,0:20:23.99:0,24,284	0/0:23,0:12:1.35:0,1,75	1/1:3,30:35:83.99:1273,84,0	0/0:12,0:12:29.95:0,30,247	0/0:15,0:15:41.86:0,42,351	./.	1/1:0,14:16:33.11:559,33,0	1/1:0,26:27:78.23:1236,78,0	1/1:5,24:29:57.08:1052,57,0	1/1:1,7:8:18.05:305,18,0	1/1:1,9:10:6.01:102,6,0	1/1:2,18:21:39.11:658,39,0	1/1:1,18:19:33.10:559,33,0	1/1:0,11:10:24.08:407,24,0	1/1:1,12:13:30.07:508,30,0	1/1:2,8:10:16.80:348,17,0	1/1:1,17:18:51.11:822,51,0	1/1:0,23:23:65.96:971,66,0	1/1:1,11:12:24.07:407,24,0	0/0:19,0:19:50.62:0,51,415	0/0:12,0:12:35.95:0,36,316	0/0:20,0:20:50.89:0,51,413	1/1:1,13:15:30.09:493,30,0	1/1:0,21:20:60.17:916,60,0	1/1:1,27:28:69.14:1152,69,0	1/1:1,17:18:35.40:797,35,0
chr10	61146183	.	AG	A	464.32	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.270;DP=598;FS=19.079;HRun=1;HaplotypeScore=64.3887;InbreedingCoeff=0.9988;MQ=60.92;MQ0=4;MQRankSum=-1.107;QD=33.17;ReadPosRankSum=-3.389;VQSLOD=1.3691;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:60.18:0,60,926	0/0:11,0:11:33.10:0,33,504	0/0:49,0:27:61.51:0,62,1075	0/0:39,0:20:60.12:0,60,887	0/0:29,0:29:87.30:0,87,1390	0/0:15,0:15:45.15:0,45,716	0/0:14,0:14:42.14:0,42,666	1/1:0,14:14:42.13:559,42,0	0/0:26,0:26:78.24:0,78,1201	0/0:26,0:26:78.27:0,78,1247	0/0:18,0:18:54.18:0,54,863	0/0:13,0:13:39.13:0,39,623	0/0:13,0:13:39.13:0,39,616	0/0:13,0:13:39.13:0,39,609	0/0:20,0:20:60.19:0,60,935	0/0:10,0:10:30.09:0,30,453	0/0:35,0:35:95.24:0,95,1502	0/0:33,0:33:90.29:0,90,1397	0/0:22,0:21:63.21:0,63,1003	0/0:32,0:32:96.33:0,96,1533	0/0:19,0:19:57.19:0,57,910	0/0:16,0:16:48.15:0,48,743	0/0:16,0:16:48.16:0,48,767	0/0:14,0:14:39.13:0,39,622	0/0:20,0:20:60.20:0,60,958	0/0:21,0:21:63.18:0,63,955	0/0:27,0:26:81.26:0,81,1269	0/0:13,0:13:39.11:0,39,597
chr10	61147111	.	AAGG	A	21678.72	PASS	AB=0.558;AC=47;AF=0.839;AN=56;BaseQRankSum=1.800;DP=608;FS=3.942;HRun=0;HaplotypeScore=115.7769;InbreedingCoeff=0.6127;MQ=49.87;MQ0=12;MQRankSum=3.677;QD=39.13;ReadPosRankSum=5.863;VQSLOD=5.9085;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:5,24:29:7.79:911,0,8	1/1:0,12:12:29.92:510,30,0	0/0:19,0:8:24.08:0,24,505	0/0:21,0:12:36.12:0,36,827	1/1:2,26:28:66.19:1092,66,0	1/1:0,28:27:66.23:1124,66,0	1/1:2,12:12:27.09:459,27,0	0/0:14,0:12:30.10:0,30,607	1/1:1,25:26:48.16:816,48,0	1/1:0,19:19:51.17:870,51,0	1/1:0,22:22:60.16:988,60,0	1/1:1,11:12:33.11:563,33,0	1/1:0,16:16:33.11:562,33,0	1/1:1,23:24:60.20:1008,60,0	1/1:1,28:29:75.26:1276,75,0	1/1:1,19:20:16.10:879,16,0	0/1:3,17:20:78.90:665,0,79	0/1:7,17:23:99:699,0,156	1/1:4,10:10:24.08:401,24,0	1/1:3,26:28:66.18:1080,66,0	1/1:0,15:15:39.13:665,39,0	1/1:1,30:31:75.26:1267,75,0	1/1:1,23:23:56.89:970,57,0	1/1:0,12:12:30.10:511,30,0	1/1:2,17:19:39.13:664,39,0	1/1:2,34:36:99:1688,99,0	1/1:2,33:35:75.21:1248,75,0	1/1:0,16:16:45.15:764,45,0
chr10	61147604	.	C	CAA	596.40	PASS	AC=2;AF=0.037;AN=54;BaseQRankSum=6.034;DP=519;FS=5.660;HRun=8;HaplotypeScore=60.9547;InbreedingCoeff=0.7862;MQ=56.85;MQ0=7;MQRankSum=-3.764;QD=21.30;ReadPosRankSum=-5.779;VQSLOD=0.8541;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:7:6:0,6,142	0/0:8,0:8:24.06:0,24,268	./.	0/0:7,0:3:2.04:0,2,6	0/0:26,0:26:69.17:0,69,769	0/0:24,0:24:69.17:0,69,760	0/0:10,0:10:27.05:0,27,291	1/1:8,16:28:56.96:691,57,0	0/0:27,0:27:69.10:0,69,745	0/0:28,0:28:78.21:0,78,870	0/0:29,0:28:69.16:0,69,759	0/0:14,0:14:36.08:0,36,401	0/0:12,0:12:27.03:0,27,291	0/0:16,0:16:39.08:0,39,424	0/0:9,0:9:27.04:0,27,282	0/0:18,0:18:47.78:0,48,535	0/0:25,0:25:71.55:0,72,777	0/0:13,0:13:16.27:0,16,347	0/0:18,0:14:33.97:0,34,370	0/0:27,0:28:63.08:0,63,761	0/0:12,0:12:33.09:0,33,368	0/0:20,0:20:48.10:0,48,527	0/0:25,0:25:57.14:0,57,635	0/0:19,0:19:51.13:0,51,569	0/0:14,0:15:41.83:0,42,437	0/0:27,0:27:72.17:0,72,794	0/0:37,0:37:96.20:0,96,1058	0/0:9,0:9:27.07:0,27,301
chr10	61147845	.	AT	A	673.93	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.278;DP=571;FS=4.125;HRun=4;HaplotypeScore=93.1543;InbreedingCoeff=0.9969;MQ=63.79;MQ0=1;MQRankSum=-0.023;QD=21.06;ReadPosRankSum=-2.455;VQSLOD=2.3686;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:75.25:0,75,1049	0/0:8,0:8:24.08:0,24,336	0/0:19,0:17:42.13:0,42,559	0/0:16,0:14:31.81:0,32,410	0/0:30,0:30:84.28:0,84,1176	0/0:30,0:30:87.27:0,87,1184	0/0:26,0:26:78.24:0,78,1060	1/1:2,30:32:66.18:769,66,0	0/0:16,0:16:48.16:0,48,670	0/0:25,0:25:69.22:0,69,952	0/0:25,0:25:72.24:0,72,1008	0/0:11,0:11:33.11:0,33,461	0/0:23,0:23:69.23:0,69,965	0/0:18,0:18:54.18:0,54,756	0/0:17,0:17:51.17:0,51,713	0/0:19,0:19:57.19:0,57,798	0/0:22,0:22:66.22:0,66,924	0/0:18,0:18:51.17:0,51,713	0/0:20,0:19:51.17:0,51,714	0/0:24,0:24:66.22:0,66,924	0/0:15,0:15:45.15:0,45,630	0/0:21,0:21:63.21:0,63,882	0/0:18,0:18:51.12:0,51,672	0/0:13,0:13:39.11:0,39,525	0/0:16,0:16:48.13:0,48,636	0/0:14,0:14:39.12:0,39,531	0/0:38,0:38:99:0,111,1520	0/0:11,0:11:33.11:0,33,459
chr10	61150969	.	AAACCC	A	479.64	PASS	AB=0.778;AC=2;AF=0.036;AN=56;BaseQRankSum=6.975;DP=571;FS=9.635;HRun=0;HaplotypeScore=106.8524;InbreedingCoeff=-0.0383;MQ=74.85;MQ0=14;MQRankSum=6.961;QD=11.42;ReadPosRankSum=-2.811;VQSLOD=1.5340;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:16:42.14:0,42,1349	0/0:8,0:8:24.08:0,24,775	0/1:13,7:17:99:369,0,534	0/1:17,5:20:99:199,0,748	0/0:25,0:25:72.25:0,72,2225	0/0:26,0:22:57.20:0,57,1839	0/0:11,0:10:27.09:0,27,759	0/0:32,0:30:90.31:0,90,2662	0/0:14,0:13:36.12:0,36,1071	0/0:30,0:28:78.27:0,78,2508	0/0:18,0:18:48.16:0,48,1494	0/0:15,0:15:42.14:0,42,1159	0/0:16,0:15:42.14:0,42,1245	0/0:21,0:21:50.81:0,51,1543	0/0:30,0:29:81.28:0,81,2555	0/0:18,0:17:42.08:0,42,1300	0/0:21,0:20:57.20:0,57,1808	0/0:6,0:5:15.05:0,15,428	0/0:20,0:17:51.18:0,51,1594	0/0:37,0:37:99:0,108,3362	0/0:20,0:17:42.14:0,42,1356	0/0:28,0:28:75.26:0,75,2162	0/0:28,0:28:75.23:0,75,2167	0/0:22,0:20:54.18:0,54,1529	0/0:15,0:15:45.11:0,45,1228	0/0:17,0:15:45.15:0,45,1452	0/0:29,0:24:75.26:0,75,2396	0/0:5,0:5:15.05:0,15,304
chr10	61153287	.	G	GT	1172.16	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-7.300;DP=520;FS=13.543;HRun=3;HaplotypeScore=64.7831;InbreedingCoeff=0.9641;MQ=102.92;MQ0=0;MQRankSum=-0.209;QD=41.86;ReadPosRankSum=-3.329;VQSLOD=0.9583;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:36.11:0,36,484	0/0:6,0:6:15.04:0,15,194	0/0:28,0:28:81.26:0,81,1098	0/0:33,0:33:70.43:0,70,1155	0/0:17,0:17:51.17:0,51,712	0/0:23,0:23:69.19:0,69,926	0/0:10,0:10:30.10:0,30,419	1/1:1,27:28:81.26:1267,81,0	0/0:26,0:26:78.25:0,78,1072	0/0:24,0:24:72.23:0,72,990	0/0:9,0:9:27.09:0,27,377	0/0:15,0:15:45.15:0,45,629	0/0:23,0:23:69.22:0,69,946	0/0:19,0:19:57.19:0,57,797	0/0:19,0:19:57.19:0,57,797	0/0:15,0:15:45.13:0,45,595	0/0:10,0:10:30.10:0,30,419	0/0:9,0:9:22.84:0,23,276	0/0:27,0:27:75.18:0,75,1021	0/0:19,0:19:57.18:0,57,781	0/0:34,0:34:99:0,99,1384	0/0:15,0:15:42.11:0,42,540	0/0:22,0:22:66.22:0,66,922	0/0:18,0:18:54.16:0,54,737	0/0:11,0:11:29.13:0,29,382	0/0:17,0:17:51.16:0,51,698	0/0:26,0:26:78.10:0,78,1029	0/0:5,0:5:15.02:0,15,190
chr10	61153882	.	G	GT	4463.07	PASS	AC=48;AF=0.889;AN=54;BaseQRankSum=-6.084;DP=211;FS=41.449;HRun=8;HaplotypeScore=21.9544;InbreedingCoeff=0.6770;MQ=82.92;MQ0=0;MQRankSum=-1.892;QD=28.07;ReadPosRankSum=5.198;VQSLOD=2.2719;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,3:4:9.03:104,9,0	./.	0/0:11,0:11:15.46:0,15,195	0/0:4,0:4:2.94:0,3,28	1/1:1,13:14:36.11:416,36,0	1/1:2,9:11:21.06:242,21,0	1/1:0,1:1:3.01:35,3,0	0/0:36,0:36:57:0,57,521	1/1:0,4:4:9.03:104,9,0	1/1:1,6:7:18.05:208,18,0	1/1:0,11:11:30.05:331,30,0	1/1:0,5:5:15.04:173,15,0	1/1:1,3:4:9.03:104,9,0	1/1:0,5:5:15.04:173,15,0	1/1:0,3:3:9.03:104,9,0	1/1:0,2:2:6.02:69,6,0	1/1:2,13:15:30.09:346,30,0	1/1:1,5:6:12.04:138,12,0	1/1:2,5:7:15.04:166,15,0	1/1:0,6:6:18.05:208,18,0	1/1:0,3:3:6.02:69,6,0	1/1:0,2:2:6.02:69,6,0	1/1:1,10:11:33.10:379,33,0	1/1:1,5:6:15.04:173,15,0	1/1:1,6:7:18.01:193,18,0	1/1:1,6:7:15.04:173,15,0	1/1:0,12:12:26.97:311,27,0	1/1:1,5:6:15.04:173,15,0
chr10	61153961	.	CATACAT	C	468.89	PASS	AB=0.667;AC=16;AF=0.533;AN=30;BaseQRankSum=0.000;DP=136;FS=24.359;HRun=0;HaplotypeScore=54.8016;InbreedingCoeff=0.4012;MQ=65.45;MQ0=4;MQRankSum=0.718;QD=10.90;ReadPosRankSum=1.368;VQSLOD=0.1136;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:5,0:2:3:0,3,27	0/0:17,0:4:5.85:0,6,52	1/1:5,5:10:9.02:124,9,0	0/0:9,0:9:18.04:0,18,450	./.	0/0:42,0:42:99:0,108,2277	./.	1/1:0,1:1:3.01:66,3,0	1/1:7,0:7:6.01:75,6,0	1/1:2,0:2:3:25,3,0	./.	./.	./.	./.	0/1:5,5:10:13.97:60,0,14	1/1:4,0:4:2.92:17,3,0	1/1:2,0:2:3.01:53,3,0	./.	./.	0/0:1,0:1:3.01:0,3,90	0/0:5,0:5:9.02:0,9,176	./.	./.	0/1:3,3:5:0.80:100,0,1	./.	1/1:0,1:1:3.01:67,3,0
chr10	61153969	.	TAC	T	159.86	PASS	AB=1.000;AC=17;AF=0.567;AN=30;BaseQRankSum=1.651;DP=126;FS=11.908;HRun=0;HaplotypeScore=52.2494;InbreedingCoeff=0.4563;MQ=63.79;MQ0=6;MQRankSum=0.444;QD=4.32;ReadPosRankSum=-0.065;VQSLOD=0.3441;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:6,0:2:2.80:0,3,13	0/0:20,0:4:5.87:0,6,39	1/1:6,2:8:6.88:52,7,0	0/0:9,0:9:18.03:0,18,279	./.	0/0:43,0:42:99:0,120,1897	./.	1/1:1,0:1:2.97:20,3,0	1/1:3,2:5:5.99:50,6,0	1/1:0,1:1:3:25,3,0	./.	./.	./.	./.	1/1:10,0:10:5.37:31,5,0	1/1:4,0:4:3:29,3,0	1/1:2,0:2:5.88:42,6,0	./.	./.	0/0:1,0:1:3.01:0,3,57	0/0:4,0:4:9:0,9,108	./.	./.	0/1:4,0:3:13.44:13,0,15	./.	1/1:2,0:1:2.96:19,3,0
chr10	61153981	.	CAT	C	234.05	PASS	AB=0.853;AC=10;AF=0.455;AN=22;BaseQRankSum=2.398;DP=122;FS=4.926;HRun=0;HaplotypeScore=57.2728;InbreedingCoeff=0.1828;MQ=64.33;MQ0=6;MQRankSum=-0.869;QD=3.66;ReadPosRankSum=2.213;VQSLOD=1.2707;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:11,0:4:4.26:0,4,13	0/0:23,0:4:2.68:0,3,11	./.	0/0:8,0:8:11.78:0,12,155	./.	0/1:44,0:43:99:166,0,593	./.	1/1:0,1:1:3.01:39,3,0	./.	./.	./.	./.	./.	./.	0/1:7,5:12:10.42:33,0,10	0/0:2,0:2:1.82:0,2,5	1/1:1,0:1:1.25:3,1,0	./.	./.	./.	0/0:1,0:1:3.01:0,3,51	./.	./.	1/1:1,3:3:5.09:48,5,0	./.	1/1:1,1:1:3.01:39,3,0
chr10	61156932	.	A	AC	792.42	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-5.782;DP=632;FS=4.278;HRun=4;HaplotypeScore=90.2676;InbreedingCoeff=0.9937;MQ=83.60;MQ0=0;MQRankSum=-2.176;QD=34.45;ReadPosRankSum=-3.469;VQSLOD=2.4384;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:57.15:0,57,636	0/0:7,0:7:21.05:0,21,230	0/0:26,0:26:69.13:0,69,756	0/0:16,0:16:41.11:0,41,426	0/0:24,0:24:66.15:0,66,734	0/0:25,0:25:69.18:0,69,773	0/0:14,0:14:42.12:0,42,476	1/1:1,22:23:66.21:887,66,0	0/0:31,0:31:84.21:0,84,934	0/0:28,0:28:84.23:0,84,940	0/0:29,0:29:84.21:0,84,938	0/0:14,0:14:39.11:0,39,442	0/0:30,0:30:78.20:0,78,875	0/0:27,0:27:81.22:0,81,910	0/0:25,0:25:72.20:0,72,809	0/0:23,0:23:66.19:0,66,749	0/0:12,0:12:27.07:0,27,306	0/0:11,0:11:26.99:0,27,294	0/0:28,0:28:69.16:0,69,758	0/0:37,0:37:99:0,108,1191	0/0:19,0:20:54.15:0,54,612	0/0:28,0:28:69.16:0,69,755	0/0:28,0:28:81.21:0,81,901	0/0:23,0:23:60.14:0,60,660	0/0:30,0:30:87.25:0,87,987	0/0:16,0:16:45.11:0,45,496	0/0:21,0:21:60.16:0,60,673	0/0:13,0:13:39.11:0,39,442
chr10	61157166	.	G	GAC	28631.33	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-9.765;DP=665;FS=1.949;HRun=0;HaplotypeScore=62.4263;InbreedingCoeff=0.9949;MQ=83.75;MQ0=2;MQRankSum=-10.049;QD=46.40;ReadPosRankSum=6.586;VQSLOD=5.9568;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,29:31:63.22:1155,63,0	1/1:0,6:6:18.06:330,18,0	0/0:35,0:35:99:0,99,1347	0/0:13,0:13:33.11:0,33,467	1/1:3,24:28:69.24:1264,69,0	1/1:1,20:21:54.19:989,54,0	1/1:0,18:19:51.17:935,51,0	1/1:1,26:28:81.24:1423,81,0	1/1:2,31:34:78.27:1430,78,0	1/1:0,21:21:60.21:1100,60,0	1/1:2,20:22:48.16:880,48,0	1/1:0,23:23:63.22:1155,63,0	1/1:1,30:32:87.30:1594,87,0	1/1:2,20:22:57.20:1044,57,0	1/1:3,26:29:72.25:1319,72,0	1/1:2,17:19:48.16:880,48,0	1/1:3,15:18:42.14:770,42,0	1/1:0,8:9:27.09:493,27,0	1/1:2,17:19:51.17:919,51,0	1/1:2,32:34:90.31:1649,90,0	1/1:0,38:39:99:1869,102,0	1/1:1,24:26:66.20:1209,66,0	1/1:2,27:29:75.26:1375,75,0	1/1:1,18:19:48.16:879,48,0	1/1:5,21:27:60.21:1100,60,0	1/1:0,31:31:93.25:1668,93,0	1/1:4,14:18:33.11:597,33,0	1/1:0,11:11:33.11:604,33,0
chr10	61158156	.	A	AC	13280.67	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-8.805;DP=596;FS=1.898;HRun=7;HaplotypeScore=68.6959;InbreedingCoeff=0.9360;MQ=62.96;MQ0=15;MQRankSum=-1.014;QD=25.99;ReadPosRankSum=4.841;VQSLOD=5.3497;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,15:24:30.03:362,30,0	1/1:1,4:5:9.03:109,9,0	0/0:36,0:20:56.93:0,57,526	0/0:30,0:17:45.06:0,45,433	1/1:1,12:13:33.02:366,33,0	1/1:6,10:14:39.09:446,39,0	1/1:5,11:16:42.12:494,42,0	0/0:3,0:19:10.76:0,11,56	1/1:10,13:22:33.10:399,33,0	1/1:7,17:23:51.16:615,51,0	1/1:4,10:14:39.08:436,39,0	1/1:6,19:24:72.21:859,72,0	1/1:1,18:19:42.10:508,42,0	1/1:2,24:26:57.17:687,57,0	1/1:2,25:27:72.22:870,72,0	1/1:2,7:8:15.04:181,15,0	1/1:6,26:30:87.19:1010,87,0	1/1:1,21:23:57.15:674,57,0	1/1:8,11:18:45.08:504,45,0	1/1:10,11:21:57.15:663,57,0	1/1:4,33:37:67.30:1080,67,0	1/1:3,18:21:48.15:577,48,0	1/1:4,15:19:21.12:254,21,0	1/1:3,19:21:54.17:652,54,0	1/1:1,10:11:9.03:105,9,0	1/1:11,16:26:19.14:489,19,0	1/1:4,19:22:42.13:507,42,0	1/1:2,13:14:36.11:435,36,0
chr10	61160218	.	T	TA	9855.72	PASS	AB=0.800;AC=54;AF=0.964;AN=56;BaseQRankSum=-3.670;DP=282;FS=0.000;HRun=3;HaplotypeScore=54.3738;InbreedingCoeff=-0.0526;MQ=63.65;MQ0=0;MQRankSum=-2.895;QD=34.95;ReadPosRankSum=2.032;VQSLOD=5.2990;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,8:8:21.07:294,21,0	1/1:2,6:8:15.05:210,15,0	0/1:3,1:4:33.42:33,0,39	0/1:6,2:8:69.45:69,0,88	1/1:1,15:16:42.11:566,42,0	1/1:0,12:12:36.12:503,36,0	1/1:2,5:7:12.01:148,12,0	1/1:3,25:28:72.22:974,72,0	1/1:0,5:5:12.04:168,12,0	1/1:0,16:16:48.13:650,48,0	1/1:0,18:18:51.17:713,51,0	1/1:1,8:9:24.08:335,24,0	1/1:0,10:10:27.09:377,27,0	1/1:1,7:8:18.06:251,18,0	1/1:1,7:8:24.07:319,24,0	1/1:0,7:7:21.04:272,21,0	1/1:2,9:11:24.08:334,24,0	1/1:0,13:13:36.12:504,36,0	1/1:0,11:11:27.04:340,27,0	1/1:2,18:20:59.86:792,60,0	1/1:1,5:6:12.04:168,12,0	1/1:1,1:2:3.01:42,3,0	1/1:1,4:5:15.05:198,15,0	1/1:0,6:6:12.04:168,12,0	1/1:0,5:5:15.05:210,15,0	1/1:1,15:16:45.15:631,45,0	1/1:1,11:12:33.11:460,33,0	1/1:0,3:3:9.03:126,9,0
chr10	61161336	.	AAT	A	6001.50	PASS	AB=1.000;AC=52;AF=0.963;AN=54;BaseQRankSum=-2.881;DP=228;FS=13.285;HRun=0;HaplotypeScore=38.0985;InbreedingCoeff=-0.0549;MQ=80.29;MQ0=1;MQRankSum=-2.818;QD=26.44;ReadPosRankSum=0.969;VQSLOD=4.5374;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,7:10:18.06:237,18,0	1/1:0,2:2:3.01:39,3,0	0/1:6,0:3:25.28:25,0,43	0/1:12,0:9:9.85:10,0,75	1/1:2,11:13:21.07:276,21,0	1/1:0,15:15:30.10:394,30,0	1/1:0,3:3:9.03:118,9,0	1/1:4,31:35:93.27:1198,93,0	1/1:0,1:1:3.01:39,3,0	1/1:2,8:10:24.08:315,24,0	1/1:3,6:9:15.05:197,15,0	1/1:1,2:3:3.01:39,3,0	./.	1/1:0,6:6:18.06:237,18,0	1/1:2,6:8:15.05:197,15,0	1/1:1,2:3:3.01:39,3,0	1/1:1,10:11:24.08:316,24,0	1/1:1,9:10:24.08:315,24,0	1/1:3,11:14:33.10:414,33,0	1/1:0,9:9:8.99:100,9,0	1/1:4,0:4:6.02:78,6,0	1/1:0,1:1:3.01:39,3,0	1/1:0,2:2:6.02:79,6,0	1/1:1,0:1:3.01:38,3,0	1/1:2,7:9:21.07:276,21,0	1/1:1,6:7:18.06:235,18,0	1/1:1,13:14:30.10:394,30,0	1/1:0,9:9:27.09:355,27,0
chr10	61162444	.	ACTGCTG	A	567.76	PASS	AC=8;AF=0.160;AN=50;BaseQRankSum=4.446;DP=499;FS=2.514;HRun=0;HaplotypeScore=100.5225;InbreedingCoeff=0.7464;MQ=76.51;MQ0=2;MQRankSum=-5.422;QD=7.67;ReadPosRankSum=-0.389;VQSLOD=2.2375;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:22:12.02:0,12,313	0/0:3,0:3:6.02:0,6,196	0/0:24,0:23:21.07:0,21,511	0/0:32,0:29:26.04:0,26,526	0/0:7,0:7:3:0,3,25	1/1:8,8:16:9.03:177,9,0	1/1:9,10:20:15.05:290,15,0	0/0:15,0:15:15.04:0,15,249	0/0:16,0:16:27.09:0,27,883	0/0:14,0:13:4.83:0,5,103	0/0:9,0:9:0.47:0,0,1	0/0:16,0:16:36.12:0,36,1152	0/0:15,0:15:24.06:0,24,678	0/0:22,0:22:39.13:0,39,1250	0/0:39,0:39:81.21:0,81,2512	0/0:16,0:16:30.10:0,30,941	0/0:25,0:27:63.10:0,63,1797	0/0:10,0:10:18.03:0,18,511	0/0:20,0:20:12.04:0,12,369	./.	0/0:31,0:31:30.10:0,30,924	./.	1/1:9,2:11:3.01:62,3,0	1/1:13,14:27:9.03:173,9,0	./.	0/0:17,0:17:13.86:0,14,355	0/0:22,0:21:42.14:0,42,1313	0/0:11,0:11:18.05:0,18,459
chr10	61162833	.	AT	A	486.58	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.314;DP=539;FS=4.344;HRun=7;HaplotypeScore=51.8204;InbreedingCoeff=0.9898;MQ=81.52;MQ0=0;MQRankSum=-1.185;QD=22.12;ReadPosRankSum=-2.912;VQSLOD=2.2316;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:51.16:0,51,642	0/0:8,0:8:24.08:0,24,302	0/0:14,0:14:18.65:0,19,379	0/0:16,0:16:35.70:0,36,424	0/0:23,0:23:66.21:0,66,830	0/0:25,0:25:69.22:0,69,868	0/0:12,0:12:33.11:0,33,415	1/1:3,19:22:57.13:581,57,0	0/0:20,0:20:57.18:0,57,716	0/0:34,0:34:99:0,99,1236	0/0:26,0:26:66.21:0,66,830	0/0:18,0:18:51.14:0,51,616	0/0:23,0:23:66.21:0,66,819	0/0:18,0:18:54.17:0,54,679	0/0:14,0:14:42.13:0,42,528	0/0:18,0:18:54.17:0,54,679	0/0:14,0:14:33.06:0,33,397	0/0:16,0:16:39.08:0,39,473	0/0:25,0:25:72.23:0,72,903	0/0:27,0:27:69.20:0,69,843	0/0:14,0:14:36.10:0,36,440	0/0:17,0:17:48.15:0,48,604	0/0:29,0:29:78.24:0,78,968	0/0:13,0:13:36.12:0,36,453	0/0:13,0:13:33.08:0,33,389	0/0:16,0:16:45.14:0,45,566	0/0:31,0:31:93.30:0,93,1165	0/0:16,0:16:48.15:0,48,604
chr10	61163992	.	C	CA	637.24	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-5.753;DP=596;FS=0.817;HRun=7;HaplotypeScore=59.8622;InbreedingCoeff=0.9615;MQ=61.82;MQ0=0;MQRankSum=-1.164;QD=27.71;ReadPosRankSum=-3.539;VQSLOD=2.8685;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:53.66:0,54,502	0/0:8,0:8:21.03:0,21,203	0/0:23,0:22:46.70:0,47,420	0/0:10,0:8:21.02:0,21,196	0/0:29,0:29:78.09:0,78,738	0/0:26,0:26:66.10:0,66,637	0/0:12,0:11:30.04:0,30,284	1/1:1,22:23:63.14:732,63,0	0/0:18,0:18:51.08:0,51,493	0/0:30,0:30:90.13:0,90,862	0/0:23,0:23:60.10:0,60,579	0/0:26,0:26:78.11:0,78,748	0/0:23,0:23:63.08:0,63,602	0/0:20,0:20:54.08:0,54,521	0/0:27,0:27:78.11:0,78,748	0/0:19,0:18:51.07:0,51,492	0/0:18,0:18:30.84:0,31,382	0/0:20,0:20:53.73:0,54,503	0/0:26,0:26:63.09:0,63,608	0/0:36,0:36:93.14:0,93,898	0/0:14,0:14:42.07:0,42,406	0/0:19,0:19:57.09:0,57,550	0/0:27,0:27:75.12:0,75,724	0/0:15,0:15:36.05:0,36,348	0/0:19,0:19:57.09:0,57,550	0/0:22,0:22:60.08:0,60,573	0/0:36,0:35:96.15:0,96,927	0/0:4,0:4:12.02:0,12,116
chr10	61164834	.	A	AAC	2786.73	PASS	AB=1.000;AC=41;AF=0.759;AN=54;BaseQRankSum=-7.180;DP=312;FS=3.415;HRun=0;HaplotypeScore=65.4680;InbreedingCoeff=0.6985;MQ=69.53;MQ0=4;MQRankSum=3.734;QD=11.56;ReadPosRankSum=0.930;VQSLOD=3.3239;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:13:13.60:45,14,0	1/1:2,0:2:5.19:19,5,0	0/0:11,0:4:2.84:0,3,14	0/0:25,0:10:3.48:0,3,61	1/1:19,0:19:42.18:163,42,0	0/0:14,0:14:19.42:0,19,93	0/0:10,0:10:14.20:0,14,70	1/1:18,6:24:45.14:679,45,0	1/1:8,0:8:14.73:115,15,0	1/1:14,0:14:31.95:229,32,0	1/1:13,0:13:29.51:265,30,0	1/1:5,0:5:10.51:71,11,0	0/1:12,0:12:6.22:56,0,6	1/1:4,0:4:9.30:62,9,0	1/1:9,0:9:17.87:128,18,0	1/1:5,0:5:12.87:82,13,0	1/1:12,0:12:27.48:158,27,0	1/1:10,0:10:9.01:38,9,0	1/1:14,1:14:28.75:212,29,0	1/1:9,0:9:5.40:52,5,0	1/1:4,0:4:2.64:12,3,0	./.	0/0:6,0:6:14.20:0,14,71	0/0:3,0:3:5.82:0,6,36	1/1:17,0:17:31.63:117,32,0	1/1:11,0:11:25.01:178,25,0	1/1:25,0:25:30.14:190,30,0	1/1:10,0:10:16.83:84,17,0
chr10	61164849	.	ACGTG	A	1072.95	PASS	AB=1.000;AC=15;AF=0.278;AN=54;BaseQRankSum=-9.678;DP=320;FS=7.112;HRun=0;HaplotypeScore=86.0157;InbreedingCoeff=0.3424;MQ=65.79;MQ0=7;MQRankSum=-0.499;QD=10.03;ReadPosRankSum=-4.429;VQSLOD=-0.4091;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:30.07:0,30,395	0/1:4,0:4:2.80:3,0,71	0/0:17,0:5:13.59:0,14,185	0/0:22,0:7:8.96:0,9,79	0/0:18,0:18:54.17:0,54,697	1/1:0,15:15:21.07:439,21,0	1/1:0,7:7:15.05:314,15,0	0/0:24,0:24:72.04:0,72,1182	0/1:8,0:8:9.47:9,0,185	0/0:15,0:14:30.51:0,31,408	0/0:13,0:13:21.25:0,21,327	0/1:5,0:5:4.04:4,0,141	0/1:14,0:14:6.80:7,0,390	0/0:5,0:5:0.76:0,1,151	0/0:8,0:8:5.97:0,6,245	0/0:5,0:5:15.05:0,15,193	0/1:14,0:14:12.47:12,0,347	0/0:7,0:7:21.07:0,21,291	0/1:20,0:18:28.03:28,0,349	0/1:11,0:11:0.49:0,0,300	0/0:4,0:4:12.04:0,12,174	./.	1/1:0,6:6:14.87:313,15,0	1/1:1,2:3:6.02:102,6,0	0/0:15,0:15:30.73:0,31,545	0/0:11,0:11:6.53:0,7,270	0/0:25,0:25:33.53:0,34,808	0/0:9,0:9:24.07:0,24,317
chr10	61164862	.	TAG	T	537.41	PASS	AC=2;AF=0.037;AN=54;BaseQRankSum=-5.640;DP=311;FS=11.256;HRun=0;HaplotypeScore=73.8229;InbreedingCoeff=0.6246;MQ=65.71;MQ0=7;MQRankSum=2.083;QD=24.43;ReadPosRankSum=-3.624;VQSLOD=2.8969;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:36.06:0,36,521	0/0:5,0:5:14.19:0,14,124	0/0:19,0:6:11.18:0,11,107	0/0:17,0:5:2.84:0,3,19	0/0:21,0:21:60.20:0,60,936	0/0:12,0:12:20.73:0,21,236	0/0:6,0:6:12.04:0,12,144	1/1:5,17:22:51.14:632,51,0	0/0:8,0:8:23.47:0,23,289	0/0:16,0:15:41.66:0,42,564	0/0:8,0:8:14.72:0,15,205	0/0:4,0:4:11.71:0,12,152	0/0:14,0:14:40.80:0,41,520	0/0:4,0:4:11.83:0,12,160	0/0:8,0:8:23.72:0,24,300	0/0:4,0:4:9.03:0,9,142	0/0:16,0:16:30.49:0,30,372	0/0:7,0:7:21.07:0,21,328	0/0:21,0:19:47.52:0,48,605	0/0:9,0:9:20.47:0,20,254	0/0:4,0:4:12.04:0,12,190	./.	0/0:6,0:6:14.99:0,15,159	0/0:2,0:2:6.02:0,6,70	0/0:15,0:15:38.87:0,39,593	0/0:12,0:12:35.87:0,36,474	0/0:24,0:24:56.45:0,56,803	0/0:9,0:9:24.08:0,24,377
chr10	61165015	.	GCTGA	G	823.33	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.751;DP=432;FS=7.007;HRun=0;HaplotypeScore=72.8935;InbreedingCoeff=0.9079;MQ=53.85;MQ0=7;MQRankSum=-5.226;QD=45.74;ReadPosRankSum=-2.711;VQSLOD=2.6422;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:78.27:0,78,2117	0/0:12,0:12:33.11:0,33,902	0/0:17,0:8:21.07:0,21,544	0/0:18,0:12:29.55:0,30,619	0/0:28,0:28:72.25:0,72,1956	0/0:20,0:20:57.20:0,57,1550	0/0:6,0:6:18.06:0,18,493	1/1:1,17:17:48.16:918,48,0	0/0:10,0:10:30.10:0,30,822	0/0:16,0:15:48.16:0,48,1292	0/0:22,0:22:57.20:0,57,1558	0/0:13,0:13:39.13:0,39,1068	0/0:17,0:17:51.18:0,51,1387	0/0:11,0:11:30.10:0,30,822	0/0:18,0:18:51.18:0,51,1397	0/0:15,0:15:39.13:0,39,1068	0/0:15,0:15:42.14:0,42,1130	0/0:13,0:13:33.11:0,33,863	0/0:18,0:17:45.15:0,45,1202	0/0:14,0:14:42.10:0,42,1086	0/0:17,0:17:48.16:0,48,1281	0/0:7,0:7:21.07:0,21,574	0/0:7,0:7:18.06:0,18,492	0/0:9,0:9:27.09:0,27,717	0/0:7,0:7:15.05:0,15,410	0/0:17,0:17:51.18:0,51,1397	0/0:36,0:35:99:0,108,2939	0/0:3,0:3:9.03:0,9,246
chr10	61165047	.	T	TA	791.33	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=-0.744;DP=408;FS=10.536;HRun=2;HaplotypeScore=59.2041;InbreedingCoeff=0.6305;MQ=69.76;MQ0=1;MQRankSum=0.211;QD=18.40;ReadPosRankSum=-4.012;VQSLOD=1.7143;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:66.09:0,66,767	0/0:9,0:9:24.02:0,24,278	0/0:16,0:12:8.46:0,8,100	0/1:14,0:11:3.30:3,0,137	0/0:21,0:21:54.05:0,54,616	0/0:20,0:20:54.06:0,54,595	0/0:5,0:5:15.05:0,15,185	1/1:15,14:29:77.99:885,78,0	0/0:10,0:10:30.04:0,30,340	0/0:14,0:14:42.10:0,42,493	0/0:19,0:19:53.97:0,54,595	0/0:13,0:13:39.12:0,39,481	0/0:15,0:15:39.09:0,39,454	0/0:14,0:14:39.02:0,39,423	0/0:15,0:15:39.12:0,39,480	0/0:13,0:13:33.03:0,33,354	0/0:17,0:17:41.94:0,42,443	0/0:9,0:9:24.08:0,24,295	0/0:13,0:13:39.10:0,39,451	0/0:13,0:13:39.01:0,39,427	0/0:11,0:11:30.07:0,30,345	0/0:10,0:10:29.98:0,30,330	0/0:6,0:6:18.04:0,18,208	0/0:7,0:7:21.07:0,21,258	0/0:11,0:11:33.01:0,33,371	0/0:21,0:21:60.08:0,60,656	0/0:36,0:35:99:0,108,1245	0/0:3,0:3:5.99:0,6,58
chr10	61167754	.	T	TA	593.56	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=1.753;DP=559;FS=9.667;HRun=7;HaplotypeScore=53.3312;InbreedingCoeff=0.9576;MQ=84.02;MQ0=0;MQRankSum=1.702;QD=28.26;ReadPosRankSum=-3.855;VQSLOD=2.2766;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:72.11:0,72,695	0/0:6,0:6:15.02:0,15,145	0/0:23,0:23:36.10:0,36,404	0/0:15,0:15:35.84:0,36,326	0/0:27,0:27:81.12:0,81,776	0/0:23,0:23:63.10:0,63,608	0/0:13,0:13:30.04:0,30,290	1/1:2,19:21:57.17:688,57,0	0/0:21,0:21:57.08:0,57,545	0/0:26,0:26:63.10:0,63,608	0/0:35,0:35:99:0,99,956	0/0:22,0:22:60.08:0,60,574	0/0:24,0:24:66.07:0,66,625	0/0:17,0:17:45.07:0,45,435	0/0:12,0:12:30.04:0,30,290	0/0:24,0:24:66.05:0,66,619	0/0:13,0:13:36.05:0,36,348	0/0:10,0:10:27.04:0,27,261	0/0:22,0:22:57.06:0,57,540	0/0:30,0:30:78.11:0,78,753	0/0:7,0:7:18.03:0,18,174	0/0:25,0:25:69.11:0,69,666	0/0:24,0:24:63.09:0,63,608	0/0:9,0:9:24.03:0,24,226	0/0:32,0:32:81.12:0,81,782	0/0:28,0:28:81.13:0,81,782	0/0:18,0:17:48.06:0,48,457	0/0:5,0:5:15.02:0,15,144
chr10	61168701	.	G	GAA	1331.81	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-6.609;DP=510;FS=0.743;HRun=2;HaplotypeScore=117.8911;InbreedingCoeff=0.9527;MQ=78.57;MQ0=0;MQRankSum=-2.196;QD=47.56;ReadPosRankSum=-3.605;VQSLOD=2.4021;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:16:50.96:0,51,441	0/0:6,0:6:14.98:0,15,126	0/0:16,0:16:48.16:0,48,666	0/0:8,0:8:18.03:0,18,240	0/0:36,0:36:99:0,102,911	0/0:22,0:22:66.22:0,66,971	0/0:10,0:10:30.10:0,30,442	1/1:2,26:28:78.27:1427,78,0	0/0:24,0:24:68.93:0,69,599	0/0:36,0:36:99:0,108,941	0/0:21,0:21:62.93:0,63,531	0/0:16,0:16:47.95:0,48,404	0/0:15,0:15:38.96:0,39,329	0/0:17,0:17:47.95:0,48,404	0/0:26,0:26:68.92:0,69,581	0/0:17,0:17:47.97:0,48,440	0/0:15,0:15:41.95:0,42,354	0/0:9,0:9:17.99:0,18,164	0/0:12,0:12:35.97:0,36,311	0/0:32,0:32:83.91:0,84,780	0/0:17,0:17:47.96:0,48,422	0/0:18,0:18:54.18:0,54,795	0/0:18,0:18:54.18:0,54,791	0/0:6,0:6:18.06:0,18,265	0/0:14,0:14:29.98:0,30,271	0/0:19,0:19:56.89:0,57,480	0/0:25,0:25:71.93:0,72,622	0/0:10,0:10:17.98:0,18,152
chr10	61168703	.	AT	A	10234.89	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=0.296;DP=505;FS=9.929;HRun=7;HaplotypeScore=75.4746;InbreedingCoeff=0.9903;MQ=79.56;MQ0=0;MQRankSum=-0.910;QD=27.15;ReadPosRankSum=3.801;VQSLOD=5.2217;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,17:17:48.11:489,48,0	1/1:0,6:6:15.03:153,15,0	0/0:17,0:17:34.87:0,35,464	0/0:8,0:8:18.06:0,18,223	1/1:5,30:35:90.16:907,90,0	0/0:22,0:22:66.21:0,66,830	0/0:10,0:10:30.10:0,30,377	0/0:28,0:28:68.12:0,68,426	1/1:1,22:23:66.15:673,66,0	1/1:2,34:36:99:1040,102,0	1/1:0,21:21:63.14:643,63,0	1/1:0,16:16:48.11:490,48,0	1/1:0,14:14:39.09:398,39,0	1/1:0,17:17:48.11:490,48,0	1/1:0,25:25:69.16:704,69,0	1/1:2,16:18:42.09:429,42,0	1/1:0,15:15:42.10:428,42,0	1/1:3,5:8:15.03:153,15,0	1/1:0,12:12:36.06:359,36,0	1/1:4,26:30:78.10:776,78,0	1/1:1,16:17:45.10:459,45,0	0/0:18,0:18:51.16:0,51,641	0/0:19,0:19:45.14:0,45,555	0/0:6,0:6:18.06:0,18,226	1/1:1,12:13:27.06:275,27,0	1/1:0,19:19:57.11:573,57,0	1/1:4,21:25:60.13:612,60,0	1/1:0,10:10:18.04:184,18,0
chr10	61169083	.	GA	G	894.94	PASS	AB=0.870;AC=17;AF=0.304;AN=56;BaseQRankSum=6.421;DP=446;FS=4.515;HRun=14;HaplotypeScore=58.6118;InbreedingCoeff=0.5799;MQ=59.12;MQ0=5;MQRankSum=1.655;QD=5.70;ReadPosRankSum=2.996;VQSLOD=2.3202;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:34.54:0,35,290	0/0:3,0:3:3:0,3,28	0/0:21,1:6:13.32:0,13,91	0/0:12,0:6:2.06:0,2,23	0/0:29,1:30:40.92:0,41,500	1/1:2,15:21:40.87:249,41,0	1/1:3,6:10:18.73:114,19,0	1/1:3,10:13:29.59:205,30,0	0/1:7,2:10:2.75:3,0,100	0/0:23,0:23:44.73:0,45,368	0/0:28,1:29:20.87:0,21,433	0/0:6,0:6:12.01:0,12,111	0/0:9,1:11:2.29:0,2,132	0/0:13,1:14:6.07:0,6,160	0/1:15,1:17:0.73:1,0,192	0/0:8,0:9:17.13:0,17,171	0/0:24,0:26:58.50:0,58,537	0/0:9,0:9:18:0,18,161	0/0:13,0:12:17.06:0,17,182	0/0:22,2:24:26.33:0,26,358	0/1:12,1:14:3.51:4,0,139	1/1:4,6:11:16.87:109,17,0	1/1:9,12:23:31.07:208,31,0	1/1:5,11:18:25.78:170,26,0	0/0:13,1:14:15.44:0,15,279	0/1:10,2:12:9.54:10,0,94	0/0:18,0:18:24.47:0,24,356	0/1:7,1:8:2.63:3,0,107
chr10	61172026	.	AT	A	8518.62	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=-0.430;DP=471;FS=4.358;HRun=10;HaplotypeScore=91.3080;InbreedingCoeff=0.9897;MQ=68.87;MQ0=0;MQRankSum=-0.394;QD=22.54;ReadPosRankSum=3.165;VQSLOD=5.4128;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,16:17:41.99:364,42,0	1/1:1,8:9:20.98:182,21,0	0/0:13,0:12:19.58:0,20,184	0/0:12,0:10:17.76:0,18,193	1/1:2,19:21:56.95:488,57,0	0/0:23,0:23:60.12:0,60,649	0/0:7,0:8:20.87:0,21,203	1/1:9,21:30:62.78:546,63,0	1/1:0,14:14:38.99:338,39,0	1/1:4,10:14:35.96:309,36,0	1/1:2,19:21:56.97:494,57,0	1/1:0,17:17:44.99:390,45,0	1/1:1,17:18:44.99:390,45,0	1/1:0,11:11:32.99:286,33,0	1/1:2,22:24:59.98:521,60,0	1/1:0,11:11:32.99:286,33,0	1/1:0,15:15:38.99:338,39,0	1/1:4,9:13:26.13:233,26,0	1/1:3,12:15:35.99:312,36,0	1/1:1,18:19:50.98:443,51,0	1/1:1,18:19:50.99:443,51,0	0/0:16,0:16:45.12:0,45,498	0/0:15,0:15:42.11:0,42,464	0/0:6,0:6:12.03:0,12,133	1/1:1,13:14:35.99:312,36,0	1/1:1,26:27:77.97:677,78,0	1/1:0,25:25:71.99:625,72,0	1/1:2,22:24:35.81:540,36,0
chr10	61172608	.	TGCGCAC	T	301.74	PASS	AB=0.930;AC=4;AF=0.071;AN=56;BaseQRankSum=1.120;DP=624;FS=5.404;HRun=0;HaplotypeScore=211.5986;InbreedingCoeff=0.4333;MQ=47.07;MQ0=26;MQRankSum=-5.915;QD=7.18;ReadPosRankSum=-1.510;VQSLOD=2.1091;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,1:39:91.84:0,92,2285	0/0:7,0:7:18.06:0,18,497	0/0:74,0:19:48.16:0,48,1374	0/0:60,0:17:42.04:0,42,1089	0/0:26,0:26:50.86:0,51,1174	0/0:22,0:22:36.09:0,36,510	0/0:18,0:18:26.73:0,27,372	1/1:14,1:13:32.94:372,33,0	0/0:14,0:14:7.68:0,8,864	0/0:16,0:16:41.18:0,41,937	0/0:16,0:16:32.91:0,33,636	0/0:20,0:20:54.14:0,54,1198	0/0:18,0:18:45.13:0,45,1145	0/0:22,0:22:48.16:0,48,1100	0/1:11,1:12:10.30:10,0,464	0/1:14,1:15:31.74:32,0,843	0/0:23,0:23:60.18:0,60,1470	0/0:23,0:23:66.23:0,66,1571	0/0:13,0:12:35.96:0,36,612	0/0:24,0:24:54.12:0,54,1203	0/0:30,0:29:53.95:0,54,1297	0/0:22,0:22:26.66:0,27,346	0/0:15,0:15:21.04:0,21,310	0/0:28,0:28:51.17:0,51,737	0/0:23,0:23:31.75:0,32,943	0/0:13,0:13:39.02:0,39,819	0/0:13,0:13:30.04:0,30,540	0/0:3,0:3:9.03:0,9,233
chr10	61172609	.	GCGCA	G	350.18	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=0.773;DP=612;FS=3.865;HRun=0;HaplotypeScore=192.3551;InbreedingCoeff=0.5224;MQ=46.97;MQ0=26;MQRankSum=-5.797;QD=12.97;ReadPosRankSum=-1.217;VQSLOD=3.2899;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:87.25:0,87,1484	0/0:7,0:7:18.06:0,18,333	0/0:73,0:19:48.12:0,48,1031	0/0:59,0:16:42.09:0,42,882	0/0:26,0:26:50.46:0,50,763	0/0:20,0:20:5.57:0,6,178	0/0:18,0:18:25.26:0,25,170	1/1:7,5:11:31.28:440,31,0	0/0:14,0:14:20.49:0,20,604	0/0:16,0:16:40.03:0,40,582	0/0:15,0:15:28.14:0,28,366	0/0:20,0:20:50.75:0,51,771	0/0:19,0:19:43.75:0,44,770	0/0:22,0:22:47.82:0,48,736	0/0:12,0:12:4.43:0,4,316	0/1:15,0:15:13.82:14,0,538	0/0:22,0:22:57.14:0,57,972	0/0:23,0:23:66.08:0,66,1012	0/0:13,0:12:27.64:0,28,298	0/0:24,0:24:47.04:0,47,765	0/0:30,0:29:50.56:0,51,839	0/0:21,0:21:23.97:0,24,135	0/0:15,0:15:17.57:0,18,129	0/0:27,0:27:48.90:0,49,297	0/0:20,0:20:39.59:0,40,592	0/0:14,0:14:37.56:0,38,514	0/0:13,0:13:20.86:0,21,296	0/0:3,0:3:9.03:0,9,160
chr10	61172611	.	GCA	G	1483.73	PASS	AB=0.964;AC=17;AF=0.304;AN=56;BaseQRankSum=1.644;DP=602;FS=13.824;HRun=0;HaplotypeScore=169.2656;InbreedingCoeff=0.5047;MQ=46.75;MQ0=28;MQRankSum=-0.890;QD=8.24;ReadPosRankSum=-2.969;VQSLOD=2.1740;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,1:38:77.05:0,77,718	0/0:7,0:7:18.02:0,18,169	0/0:72,0:17:45.05:0,45,701	0/0:61,0:15:39.09:0,39,570	0/0:26,1:27:13.60:0,14,281	1/1:4,15:19:23.35:259,23,0	1/1:7,10:17:9.78:196,10,0	1/1:9,3:11:27.66:289,28,0	0/0:13,0:14:24.05:0,24,298	0/0:15,0:15:27.73:0,28,271	0/1:14,0:14:2.58:3,0,126	0/0:17,1:18:2.16:0,2,321	0/0:19,0:19:21.67:0,22,371	0/1:19,2:21:24.86:25,0,318	0/1:13,0:13:7.56:8,0,110	0/0:15,0:15:2.52:0,3,244	0/0:21,0:21:50.47:0,50,466	0/0:22,1:23:1.43:0,1,386	0/1:11,0:10:1.04:1,0,71	0/0:24,0:24:13.95:0,14,355	0/0:31,0:29:41.60:0,42,403	1/1:3,18:21:25.38:266,25,0	1/1:6,8:14:8.39:150,8,0	1/1:11,17:28:34.99:450,35,0	0/0:19,1:20:3.48:0,3,201	0/0:14,0:14:18.39:0,18,184	0/1:9,1:10:15.84:16,0,113	0/0:3,0:3:8.99:0,9,80
chr10	61172996	.	CA	C	9223.81	PASS	AB=1.000;AC=43;AF=0.768;AN=56;BaseQRankSum=4.597;DP=506;FS=11.069;HRun=9;HaplotypeScore=58.6913;InbreedingCoeff=0.9137;MQ=75.13;MQ0=0;MQRankSum=-2.605;QD=22.01;ReadPosRankSum=2.200;VQSLOD=5.2231;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,17:19:51.03:467,51,0	1/1:0,7:7:21.01:192,21,0	0/0:13,0:13:24.11:0,24,231	0/1:18,0:17:6.90:7,0,271	1/1:1,20:21:54.02:494,54,0	0/0:21,0:21:54.16:0,54,621	0/0:11,0:11:30.09:0,30,346	1/1:8,27:35:83.49:750,83,0	1/1:2,18:20:48.03:439,48,0	1/1:3,22:25:66.03:604,66,0	1/1:1,18:19:54.03:494,54,0	1/1:2,12:14:33.02:302,33,0	1/1:3,16:19:47.69:423,48,0	1/1:1,15:16:42.02:384,42,0	1/1:1,21:22:48.02:439,48,0	1/1:4,16:20:48.02:439,48,0	1/1:3,9:12:27.01:247,27,0	1/1:1,12:13:36.02:329,36,0	1/1:1,17:18:51.03:467,51,0	1/1:1,22:23:57.01:522,57,0	1/1:1,7:8:18.01:165,18,0	0/0:12,0:12:27.08:0,27,312	0/0:20,0:20:48.13:0,48,546	0/0:9,0:9:24.07:0,24,277	1/1:3,29:32:66.04:604,66,0	1/1:0,18:18:54.03:494,54,0	1/1:3,26:29:78.04:714,78,0	1/1:0,11:11:27.01:247,27,0
chr10	61174083	.	CAAAAATCCCTTA	C	975.07	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.188;DP=599;FS=1.183;HRun=0;HaplotypeScore=212.6068;InbreedingCoeff=0.9582;MQ=58.68;MQ0=2;MQRankSum=-4.441;QD=42.39;ReadPosRankSum=-1.938;VQSLOD=3.0579;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:84.25:0,84,4449	0/0:10,0:10:24.08:0,24,1456	0/0:17,0:11:30.10:0,30,1640	0/0:23,0:10:24.08:0,24,1212	0/0:22,0:22:57.20:0,57,3228	0/0:23,0:23:69.24:0,69,3888	0/0:16,0:16:48.16:0,48,2801	1/1:10,13:16:33.10:1070,33,0	0/0:17,0:17:48.15:0,48,2769	0/0:33,0:33:90.31:0,90,5379	0/0:35,0:35:99:0,102,5991	0/0:13,0:13:36.12:0,36,2147	0/0:19,0:19:57.18:0,57,3214	0/0:15,0:15:45.15:0,45,2612	0/0:17,0:17:45.15:0,45,2749	0/0:22,0:22:63.22:0,63,3854	0/0:25,0:25:72.25:0,72,4169	0/0:30,0:30:88.34:0,88,4786	0/0:18,0:18:48.12:0,48,2577	0/0:20,0:19:51.18:0,51,3095	0/0:6,0:6:18.06:0,18,1032	0/0:25,0:25:69.24:0,69,4126	0/0:31,0:31:90.28:0,90,5077	0/0:17,0:17:45.63:0,46,2632	0/0:20,0:20:57.20:0,57,3320	0/0:28,0:28:78.27:0,78,4382	0/0:41,0:41:99:0,120,7190	0/0:4,0:4:12.04:0,12,711
chr10	61174996	.	C	CA	541.14	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-7.221;DP=643;FS=4.707;HRun=7;HaplotypeScore=65.8254;InbreedingCoeff=0.9944;MQ=66.60;MQ0=0;MQRankSum=-0.605;QD=20.81;ReadPosRankSum=-2.660;VQSLOD=2.5461;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:51.04:0,51,484	0/0:10,0:10:27.04:0,27,261	0/0:21,0:20:43.56:0,44,390	0/0:18,0:18:38.92:0,39,348	0/0:39,0:39:99:0,99,956	0/0:29,0:29:81.13:0,81,782	0/0:17,0:17:44.73:0,45,415	1/1:8,18:26:54.12:636,54,0	0/0:25,0:25:69.10:0,69,661	0/0:28,0:28:72.10:0,72,691	0/0:34,0:34:78.09:0,78,748	0/0:23,0:23:60.04:0,60,570	0/0:20,0:20:54.07:0,54,515	0/0:18,0:18:54.08:0,54,516	0/0:15,0:15:42.06:0,42,406	0/0:13,0:13:33.04:0,33,315	0/0:36,0:36:89.99:0,90,839	0/0:19,0:19:48.07:0,48,463	0/0:17,0:17:48.02:0,48,451	0/0:31,0:31:84.12:0,84,806	0/0:16,0:16:39.06:0,39,376	0/0:31,0:31:75.11:0,75,724	0/0:34,0:34:87.13:0,87,840	0/0:19,0:19:48.05:0,48,456	0/0:27,0:27:75.09:0,75,719	0/0:20,0:20:57.09:0,57,550	0/0:26,0:26:72.10:0,72,690	0/0:10,0:10:21.02:0,21,203
chr10	61176042	.	CAA	C	1829.29	PASS	AB=0.944;AC=13;AF=0.232;AN=56;BaseQRankSum=8.659;DP=493;FS=0.925;HRun=14;HaplotypeScore=98.1763;InbreedingCoeff=0.8815;MQ=64.33;MQ0=2;MQRankSum=0.006;QD=14.75;ReadPosRankSum=2.960;VQSLOD=3.0303;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:46.59:0,47,493	0/0:5,0:5:12.01:0,12,109	0/0:21,0:11:5.84:0,6,40	0/1:16,1:10:5.37:5,0,119	0/0:20,0:21:44.99:0,45,415	1/1:1,17:18:51:471,51,0	1/1:3,4:6:11.90:111,12,0	1/1:6,0:17:23.80:97,24,0	0/0:13,0:13:29.84:0,30,255	0/0:22,0:23:35.70:0,36,342	0/0:21,0:22:53.90:0,54,436	0/0:13,0:13:29.84:0,30,263	0/0:5,0:5:15.02:0,15,150	0/0:16,0:17:41.26:0,41,385	0/0:8,0:8:20.99:0,21,181	0/0:11,0:11:29.21:0,29,242	0/0:28,0:28:62:0,62,610	0/0:13,0:13:23.97:0,24,201	0/0:29,0:29:65.22:0,65,484	0/0:25,0:25:62.87:0,63,505	0/0:7,0:7:14.99:0,15,126	1/1:3,16:19:44.73:416,45,0	1/1:1,24:24:56.94:527,57,0	1/1:1,17:18:41.96:388,42,0	0/0:18,0:18:47.94:0,48,400	0/0:28,0:28:42.98:0,43,402	0/0:20,0:20:49.58:0,50,425	0/0:12,0:13:24.09:0,24,238
chr10	61176045	.	A	AC	2740.68	PASS	AB=1.000;AC=36;AF=0.643;AN=56;BaseQRankSum=-2.144;DP=487;FS=17.152;HRun=0;HaplotypeScore=87.0680;InbreedingCoeff=0.0296;MQ=64.42;MQ0=2;MQRankSum=3.097;QD=6.20;ReadPosRankSum=1.005;VQSLOD=1.9743;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:28:40.83:110,0,41	0/0:5,0:5:3.23:0,3,9	0/0:19,0:10:23.58:0,24,194	0/0:16,0:10:21.77:0,22,167	0/1:22,0:22:7.09:62,0,7	1/1:18,0:18:46.65:210,47,0	1/1:6,1:6:16.39:89,16,0	0/1:19,0:16:76.41:76,0,129	0/1:13,0:13:24.09:72,0,24	1/1:19,1:20:12.51:113,13,0	0/1:21,0:21:19.81:27,0,20	0/1:12,0:12:11.01:58,0,11	0/0:5,0:5:6.83:0,7,28	0/1:18,0:18:5.79:41,0,6	1/1:8,0:8:0.86:19,1,0	0/1:11,0:11:0.91:41,0,1	0/1:26,0:26:28.92:29,0,43	1/1:11,0:11:4.99:45,5,0	1/1:29,0:29:8.10:172,8,0	0/1:26,0:26:7.40:87,0,7	1/1:7,0:7:6.09:47,6,0	1/1:19,0:19:52.62:272,53,0	1/1:26,0:25:60.45:289,60,0	1/1:19,0:19:39.66:182,40,0	0/1:18,0:18:2.80:3,0,7	1/1:5,24:29:75.72:775,76,0	0/1:21,0:21:34.69:35,0,50	1/1:13,0:13:2.15:53,2,0
chr10	61176276	.	A	AG	513.63	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-4.717;DP=523;FS=7.084;HRun=0;HaplotypeScore=71.0023;InbreedingCoeff=0.9377;MQ=62.49;MQ0=1;MQRankSum=-5.739;QD=25.68;ReadPosRankSum=-3.088;VQSLOD=3.3378;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:17.16:0,17,673	0/0:8,0:8:24.07:0,24,321	0/0:14,0:13:36.07:0,36,462	0/0:10,0:7:21.04:0,21,248	0/0:31,0:31:93.27:0,93,1250	0/0:18,0:18:51.17:0,51,713	0/0:10,0:10:27.05:0,27,355	1/1:0,20:14:42.09:608,42,0	0/0:16,0:16:45.13:0,45,585	0/0:24,0:24:72.24:0,72,1007	0/0:26,0:26:78.26:0,78,1089	0/0:16,0:16:45.13:0,45,599	0/0:17,0:16:48.16:0,48,666	0/0:16,0:16:48.11:0,48,632	0/0:14,0:14:42.14:0,42,587	0/0:17,0:17:51.13:0,51,676	0/0:26,0:26:78.23:0,78,1068	0/0:11,0:11:10.24:0,10,355	0/0:32,0:31:93.28:0,93,1278	0/0:25,0:25:72.19:0,72,941	0/0:7,0:7:20.94:0,21,227	0/0:19,0:19:54.14:0,54,719	0/0:21,0:21:60.20:0,60,838	0/0:13,0:13:39.13:0,39,545	0/0:21,0:21:60.17:0,60,806	0/0:33,0:33:96.24:0,96,1299	0/0:23,0:23:69.22:0,69,938	0/0:14,0:14:42.11:0,42,552
chr10	61176395	.	C	CACAAAAA	6628.26	PASS	AB=0.622;AC=24;AF=0.429;AN=56;BaseQRankSum=11.057;DP=462;FS=0.805;HRun=0;HaplotypeScore=127.0695;InbreedingCoeff=-0.2975;MQ=58.91;MQ0=4;MQRankSum=-5.213;QD=19.55;ReadPosRankSum=1.828;VQSLOD=4.5352;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:10,0:21:48.58:288,0,49	1/1:1,1:8:14.95:272,15,0	0/0:23,0:17:41.96:0,42,990	0/0:19,0:9:23.64:0,24,516	0/1:11,0:27:99:486,0,121	0/0:17,0:17:51.17:0,51,1241	0/0:11,0:11:33.10:0,33,823	0/1:8,0:9:90.31:99,0,90	0/1:5,0:15:66.35:212,0,66	0/1:8,0:24:93.81:576,0,94	0/1:9,0:26:51.17:692,0,51	0/1:5,0:11:24.83:142,0,25	0/1:3,0:9:11.73:132,0,12	0/1:3,0:9:56.35:127,0,56	0/1:5,0:12:64.41:180,0,64	1/1:4,0:19:16.24:478,16,0	0/1:5,0:18:99:220,0,100	0/1:2,0:12:24.63:204,0,25	0/1:9,0:17:99:436,0,101	0/1:12,0:26:99:726,0,149	1/1:2,0:9:18.06:251,18,0	0/0:19,0:19:55.42:0,55,1376	0/0:20,0:21:60.15:0,60,1443	0/0:13,0:13:36.11:0,36,905	0/1:3,0:11:20.50:261,0,21	0/1:12,0:27:95.97:536,0,96	0/1:5,0:13:67.41:139,0,67	0/1:2,0:10:6.93:170,0,7
chr10	61176569	.	T	TA	546.97	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-2.239;DP=536;FS=5.820;HRun=8;HaplotypeScore=58.9543;InbreedingCoeff=0.9853;MQ=63.94;MQ0=0;MQRankSum=2.348;QD=22.79;ReadPosRankSum=-3.995;VQSLOD=2.4204;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:81.90:0,82,736	0/0:8,0:8:18.01:0,18,165	0/0:15,0:14:23.97:0,24,212	0/0:12,0:11:23.98:0,24,213	0/0:23,0:23:60.01:0,60,544	0/0:21,0:21:54:0,54,488	0/0:10,0:10:26.97:0,27,239	1/1:5,19:24:57.13:642,57,0	0/0:19,0:19:48.02:0,48,439	0/0:19,0:19:45:0,45,409	0/0:24,0:24:59.98:0,60,537	0/0:18,0:18:51.01:0,51,462	0/0:17,0:17:48.02:0,48,436	0/0:19,0:19:57.03:0,57,522	0/0:22,0:22:57.02:0,57,521	0/0:21,0:20:51.02:0,51,467	0/0:19,0:19:43.74:0,44,433	0/0:12,0:12:29.99:0,30,269	0/0:20,0:20:57.02:0,57,518	0/0:27,0:27:72.02:0,72,654	0/0:15,0:15:42:0,42,379	0/0:23,0:23:66.04:0,66,604	0/0:24,0:24:63.01:0,63,571	0/0:15,0:15:41.98:0,42,376	0/0:27,0:27:69.03:0,69,629	0/0:20,0:20:51.03:0,51,467	0/0:20,0:20:60.03:0,60,549	0/0:9,0:9:27.01:0,27,246
chr10	61177786	.	C	CA	25802.06	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-6.332;DP=731;FS=19.084;HRun=2;HaplotypeScore=72.5049;InbreedingCoeff=0.9997;MQ=70.14;MQ0=1;MQRankSum=-6.740;QD=38.11;ReadPosRankSum=6.209;VQSLOD=2.8463;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:2,37:39:96.32:1382,96,0	1/1:0,11:11:30.10:432,30,0	0/0:36,1:29:49.48:0,49,906	0/0:17,0:15:38.76:0,39,413	1/1:0,31:30:75.21:1057,75,0	1/1:1,31:33:81.27:1167,81,0	1/1:1,26:27:60.20:864,60,0	1/1:2,19:21:54.18:777,54,0	1/1:1,21:22:63.21:907,63,0	1/1:1,31:32:93.28:1287,93,0	1/1:0,20:20:57.19:821,57,0	1/1:1,20:21:54.18:778,54,0	1/1:0,39:39:99:1597,111,0	1/1:0,27:27:72.24:1037,72,0	1/1:0,27:27:72.24:1037,72,0	1/1:0,27:27:75.25:1080,75,0	1/1:0,24:24:63.21:907,63,0	1/1:2,28:30:81.10:1162,81,0	1/1:0,23:23:69.23:989,69,0	1/1:2,33:35:87.29:1253,87,0	1/1:1,15:16:48.14:671,48,0	1/1:3,26:29:75.25:1080,75,0	1/1:1,28:29:72.11:1037,72,0	1/1:1,23:24:66.22:950,66,0	1/1:0,25:25:63.21:907,63,0	1/1:0,20:20:60.20:852,60,0	1/1:1,31:32:84:1209,84,0	1/1:0,13:13:39.13:562,39,0
chr10	61179073	.	G	GC	644.50	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-6.002;DP=551;FS=1.505;HRun=0;HaplotypeScore=137.8042;InbreedingCoeff=0.9827;MQ=61.93;MQ0=0;MQRankSum=-5.854;QD=19.53;ReadPosRankSum=-4.783;VQSLOD=3.5717;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:66.51:0,67,390	0/0:7,0:7:20.68:0,21,132	0/0:10,0:10:20.16:0,20,307	0/0:10,0:9:24.07:0,24,320	0/0:30,0:30:84.12:0,84,540	0/0:20,0:20:49.98:0,50,319	0/0:15,0:14:41.14:0,41,257	1/1:8,21:32:69.62:739,70,0	0/0:15,0:15:41.42:0,41,273	0/0:25,0:25:71.40:0,71,534	0/0:25,0:25:73.53:0,74,488	0/0:24,0:24:62.24:0,62,417	0/0:20,0:20:48.07:0,48,374	0/0:17,0:17:38.48:0,38,275	0/0:13,0:13:32.57:0,33,217	0/0:16,0:16:41.27:0,41,291	0/0:14,0:14:41.13:0,41,262	0/0:15,0:15:40.78:0,41,245	0/0:21,0:21:62.49:0,62,461	0/0:23,0:23:67.86:0,68,482	0/0:10,0:10:26.58:0,27,169	0/0:18,0:18:53.04:0,53,348	0/0:27,0:27:70.71:0,71,453	0/0:26,0:25:58.60:0,59,358	0/0:20,0:20:59.12:0,59,410	0/0:29,0:30:89.10:0,89,658	0/0:31,0:31:82.30:0,82,533	0/0:7,0:7:20.55:0,21,126
chr10	61179076	.	T	TTG	24322.72	PASS	AB=1.000;AC=53;AF=0.946;AN=56;BaseQRankSum=-1.921;DP=568;FS=8.589;HRun=0;HaplotypeScore=69.3704;InbreedingCoeff=0.7411;MQ=62.18;MQ0=0;MQRankSum=-4.038;QD=43.67;ReadPosRankSum=4.350;VQSLOD=6.2253;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,26:30:60.21:1098,60,0	1/1:0,10:10:21.07:385,21,0	0/1:13,0:12:5.26:5,0,296	0/0:11,0:10:27.09:0,27,378	1/1:1,29:31:81.28:1483,81,0	1/1:2,19:21:48.16:879,48,0	1/1:1,14:14:39.13:714,39,0	1/1:9,0:29:78.18:1294,78,0	1/1:1,14:16:39.13:714,39,0	1/1:3,22:25:63.22:1155,63,0	1/1:2,24:26:72.16:1281,72,0	1/1:0,24:24:63.22:1154,63,0	1/1:3,17:23:51.17:929,51,0	1/1:2,17:19:36.12:659,36,0	1/1:1,13:14:30.10:550,30,0	1/1:2,16:18:39.13:715,39,0	1/1:1,15:16:39.13:714,39,0	1/1:2,13:15:36.12:659,36,0	1/1:2,19:21:60.17:1056,60,0	1/1:2,21:24:57.20:1044,57,0	1/1:0,10:10:27.09:495,27,0	1/1:1,15:16:42.14:769,42,0	1/1:0,24:24:63.22:1154,63,0	1/1:2,25:26:57.20:1044,57,0	1/1:1,20:21:57.20:1045,57,0	1/1:3,28:31:87.27:1518,87,0	1/1:1,29:30:78.27:1428,78,0	1/1:0,7:7:21.07:385,21,0
chr10	61179296	.	G	GA	17495.52	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-5.582;DP=590;FS=11.039;HRun=6;HaplotypeScore=53.2982;InbreedingCoeff=0.9868;MQ=57.27;MQ0=6;MQRankSum=3.630;QD=31.47;ReadPosRankSum=2.798;VQSLOD=4.8426;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,20:24:66.16:807,66,0	1/1:0,9:9:15.05:189,15,0	0/0:20,0:7:20.97:0,21,200	0/0:14,0:9:27.06:0,27,273	1/1:3,26:29:69.22:865,69,0	1/1:0,28:28:75.24:939,75,0	1/1:1,14:15:39.08:473,39,0	1/1:5,29:34:90.29:1128,90,0	1/1:3,18:21:54.17:679,54,0	1/1:2,27:29:81.26:1019,81,0	1/1:2,32:34:96.18:1167,96,0	1/1:1,17:18:45.14:562,45,0	1/1:2,18:20:42.13:519,42,0	1/1:2,15:17:45.14:566,45,0	1/1:0,13:13:39.12:491,39,0	1/1:4,13:17:34.96:451,35,0	1/1:3,22:25:63.09:766,63,0	1/1:6,22:28:66.20:815,66,0	1/1:2,11:13:33.10:408,33,0	1/1:0,24:24:72.23:903,72,0	1/1:1,10:11:27.09:340,27,0	1/1:1,22:23:66.21:825,66,0	1/1:2,21:23:60.19:753,60,0	1/1:6,23:29:54.17:679,54,0	1/1:1,10:11:27.09:340,27,0	1/1:2,20:22:60.19:754,60,0	1/1:4,23:27:60.19:755,60,0	1/1:0,12:12:24.08:302,24,0
chr10	61179479	.	CA	C	333.51	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-1.563;DP=492;FS=3.365;HRun=7;HaplotypeScore=116.7777;InbreedingCoeff=0.8551;MQ=64.50;MQ0=0;MQRankSum=-4.463;QD=15.88;ReadPosRankSum=-2.506;VQSLOD=2.7372;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:8.99:0,9,316	0/0:8,0:8:24.08:0,24,302	0/0:10,0:11:20.72:0,21,230	0/0:13,0:13:7.16:0,7,193	0/0:29,0:29:72.22:0,72,886	0/0:19,0:19:54.16:0,54,667	0/0:16,0:16:39.11:0,39,491	1/1:4,17:19:42.09:428,42,0	0/0:18,0:18:54.16:0,54,666	0/0:23,0:23:66.21:0,66,829	0/0:33,0:33:96.28:0,96,1173	0/0:15,0:15:45.12:0,45,551	0/0:16,0:16:42.13:0,42,528	0/0:11,0:11:30.08:0,30,364	0/0:18,0:18:51.16:0,51,630	0/0:15,0:15:36.12:0,36,453	0/0:22,0:22:40.50:0,41,697	0/0:15,0:15:41.97:0,42,504	0/0:18,0:18:54.16:0,54,667	0/0:25,0:25:75.24:0,75,942	0/0:7,0:7:15.05:0,15,189	0/0:13,0:13:39.12:0,39,490	0/0:14,0:14:42.12:0,42,515	0/0:11,0:11:30.10:0,30,377	0/0:20,0:20:54.17:0,54,679	0/0:35,0:35:99:0,99,1245	0/0:27,0:27:60.19:0,60,755	0/0:8,0:8:24.08:0,24,302
chr10	61179513	.	CAA	C	9202.52	PASS	AB=0.769;AC=44;AF=0.786;AN=56;BaseQRankSum=1.851;DP=504;FS=4.661;HRun=13;HaplotypeScore=134.3093;InbreedingCoeff=0.7472;MQ=66.08;MQ0=0;MQRankSum=-1.596;QD=21.16;ReadPosRankSum=3.856;VQSLOD=3.5982;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,12:13:32.94:307,33,0	1/1:1,10:11:23.87:220,24,0	0/0:18,0:14:27.87:0,28,270	0/1:14,0:12:5.94:6,0,110	1/1:1,27:28:62.96:609,63,0	0/0:6,0:15:25.97:0,26,137	0/0:6,0:11:22.95:0,23,113	1/1:5,17:23:32.71:451,33,0	1/1:1,20:21:57.03:552,57,0	1/1:7,18:25:53.49:521,53,0	1/1:7,25:32:71.67:693,72,0	1/1:4,9:13:29.92:285,30,0	1/1:3,13:16:35.90:349,36,0	1/1:1,6:7:18.03:174,18,0	1/1:0,23:23:69.11:669,69,0	1/1:0,14:14:39.06:378,39,0	1/1:7,10:17:38.91:370,39,0	1/1:3,9:12:23.99:233,24,0	1/1:7,10:16:29.87:291,30,0	1/1:3,21:24:62.92:597,63,0	1/1:2,3:5:7.99:86,8,0	0/0:3,1:16:1.94:0,2,83	0/1:5,2:15:28.70:29,0,117	0/0:3,0:9:17.97:0,18,77	1/1:4,19:23:56.75:522,57,0	1/1:3,27:30:80.79:784,81,0	1/1:3,36:39:86.80:829,87,0	1/1:0,10:10:26.96:249,27,0
chr10	61180297	.	G	GA	497.75	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.698;DP=544;FS=0.000;HRun=7;HaplotypeScore=54.2294;InbreedingCoeff=0.9806;MQ=71.35;MQ0=0;MQRankSum=-1.439;QD=23.70;ReadPosRankSum=-3.507;VQSLOD=2.1719;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:32:71.12:0,71,795	0/0:11,0:11:33.03:0,33,312	0/0:16,0:15:38.96:0,39,356	0/0:16,0:15:30.04:0,30,288	0/0:28,0:28:75.12:0,75,724	0/0:36,0:36:99:0,99,949	0/0:11,0:11:21.03:0,21,203	1/1:4,17:21:51.13:593,51,0	0/0:17,0:17:51.08:0,51,492	0/0:31,0:31:78.10:0,78,749	0/0:22,0:22:60.09:0,60,579	0/0:12,0:12:30.04:0,30,289	0/0:9,0:9:27.04:0,27,261	0/0:17,0:17:45.07:0,45,435	0/0:13,0:13:33.05:0,33,319	0/0:14,0:14:42.04:0,42,395	0/0:14,0:14:33.05:0,33,319	0/0:13,0:13:33.05:0,33,318	0/0:26,0:26:63.09:0,63,604	0/0:26,0:26:75.12:0,75,724	0/0:13,0:13:36.06:0,36,348	0/0:17,0:18:53.12:0,53,499	0/0:27,0:27:78.10:0,78,741	0/0:17,0:17:42.07:0,42,406	0/0:34,0:34:99:0,102,985	0/0:13,0:13:36.06:0,36,348	0/0:27,0:27:75.10:0,75,717	0/0:10,0:10:16.18:0,16,148
chr10	61180431	.	TA	T	789.71	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.473;DP=551;FS=0.000;HRun=5;HaplotypeScore=62.2513;InbreedingCoeff=0.9783;MQ=79.70;MQ0=0;MQRankSum=-3.085;QD=29.25;ReadPosRankSum=-3.913;VQSLOD=2.0658;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:48.16:0,48,657	0/0:5,0:5:15.05:0,15,205	0/0:24,0:24:63.18:0,63,820	0/0:27,1:27:48.73:0,49,834	0/0:28,0:28:84.26:0,84,1129	0/0:27,0:27:78.23:0,78,1035	0/0:10,0:10:27.09:0,27,369	1/1:0,27:27:78.22:885,78,0	0/0:16,0:16:45.14:0,45,601	0/0:28,0:28:81.27:0,81,1107	0/0:25,0:25:75.23:0,75,1003	0/0:18,0:18:51.17:0,51,697	0/0:20,0:20:51.17:0,51,698	0/0:18,0:18:54.18:0,54,738	0/0:18,0:18:51.15:0,51,669	0/0:15,0:15:39.13:0,39,534	0/0:13,0:13:39.10:0,39,514	0/0:9,0:9:27.07:0,27,351	0/0:16,0:16:48.15:0,48,641	0/0:31,0:31:84.28:0,84,1148	0/0:14,0:14:40.02:0,40,535	0/0:22,0:22:63.21:0,63,861	0/0:33,0:33:93.30:0,93,1256	0/0:15,0:15:39.13:0,39,534	0/0:20,0:20:57.19:0,57,780	0/0:19,0:19:42.13:0,42,558	0/0:28,0:28:81.25:0,81,1084	0/0:7,0:7:21.07:0,21,287
chr10	61181825	.	G	GA	1034.33	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-8.789;DP=647;FS=3.651;HRun=3;HaplotypeScore=64.6262;InbreedingCoeff=0.9986;MQ=78.94;MQ0=0;MQRankSum=1.299;QD=32.32;ReadPosRankSum=-3.783;VQSLOD=2.2414;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:81.21:0,81,955	0/0:12,0:12:36.11:0,36,430	0/0:27,0:27:72.13:0,72,833	0/0:21,0:21:56.98:0,57,678	0/0:28,0:28:78.24:0,78,935	0/0:19,0:19:54.17:0,54,648	0/0:21,0:21:60.18:0,60,720	1/1:4,28:32:81.20:1129,81,0	0/0:20,0:20:48.15:0,48,576	0/0:19,0:19:51.16:0,51,612	0/0:15,0:15:36.11:0,36,431	0/0:17,0:17:48.10:0,48,541	0/0:27,0:27:81.22:0,81,948	0/0:26,0:26:78.24:0,78,936	0/0:33,0:33:96.28:0,96,1140	0/0:30,0:30:90.28:0,90,1080	0/0:23,0:23:69.21:0,69,828	0/0:14,0:14:42.13:0,42,504	0/0:27,0:27:66.18:0,66,771	0/0:15,0:15:36.11:0,36,431	0/0:32,0:32:84.26:0,84,1007	0/0:27,0:27:81.25:0,81,970	0/0:24,0:24:63.19:0,63,753	0/0:22,0:22:60.18:0,60,720	0/0:25,0:25:72.20:0,72,840	0/0:22,0:22:66.19:0,66,782	0/0:30,0:30:90.26:0,90,1066	0/0:10,0:9:27.08:0,27,324
chr10	61182658	.	T	TG	1133.84	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-6.103;DP=482;FS=13.055;HRun=0;HaplotypeScore=86.4443;InbreedingCoeff=0.9865;MQ=75.68;MQ0=0;MQRankSum=-0.140;QD=40.49;ReadPosRankSum=-4.687;VQSLOD=1.0369;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:36.06:0,36,431	0/0:7,0:7:21.07:0,21,273	0/0:11,0:11:33.10:0,33,436	0/0:15,0:14:39.12:0,39,510	0/0:24,0:24:69.22:0,69,883	0/0:27,0:27:76.10:0,76,934	0/0:11,0:11:33.11:0,33,428	1/1:1,27:28:84.24:1229,84,0	0/0:17,0:17:51.15:0,51,645	0/0:27,0:27:79.10:0,79,946	0/0:13,0:13:39.11:0,39,483	0/0:15,0:15:45.15:0,45,585	0/0:19,0:19:57.19:0,57,742	0/0:15,0:15:43.02:0,43,546	0/0:20,0:20:60.19:0,60,778	0/0:12,0:12:36.12:0,36,466	0/0:12,0:12:36.08:0,36,425	0/0:25,0:25:72.21:0,72,903	0/0:13,0:13:39.11:0,39,484	0/0:26,0:26:78.24:0,78,998	0/0:17,0:17:45.15:0,45,583	0/0:6,0:6:18.06:0,18,234	0/0:25,0:25:75.24:0,75,961	0/0:14,0:14:42.14:0,42,543	0/0:12,0:12:36.11:0,36,454	0/0:11,0:11:33.11:0,33,429	0/0:35,0:34:99:0,105,1324	0/0:13,0:13:39.13:0,39,506
chr10	61182804	.	C	CT	14076.09	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-6.478;DP=491;FS=0.000;HRun=6;HaplotypeScore=44.2479;InbreedingCoeff=0.9555;MQ=76.59;MQ0=0;MQRankSum=-6.959;QD=30.27;ReadPosRankSum=3.877;VQSLOD=5.0116;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,13:15:30.10:377,30,0	1/1:0,4:4:12.04:151,12,0	0/0:19,0:19:33.03:0,33,340	0/0:7,0:7:11.48:0,11,81	1/1:1,23:24:66.08:777,66,0	1/1:0,19:19:51.16:642,51,0	1/1:0,10:10:21.07:264,21,0	1/1:4,17:21:51.15:627,51,0	1/1:1,15:16:42.13:528,42,0	1/1:4,21:25:60.19:754,60,0	1/1:2,29:32:87.28:1086,87,0	1/1:2,13:15:30.10:377,30,0	1/1:0,12:12:27.09:340,27,0	1/1:2,13:15:33.11:415,33,0	1/1:4,12:16:39.12:482,39,0	1/1:0,15:15:39.12:491,39,0	1/1:2,16:18:42.13:528,42,0	1/1:3,13:16:30.10:377,30,0	1/1:2,8:10:24.08:302,24,0	1/1:3,38:41:99:1350,111,0	1/1:0,10:10:18.06:226,18,0	1/1:1,19:20:51.08:598,51,0	1/1:3,18:21:48.15:604,48,0	1/1:0,15:15:42.13:528,42,0	1/1:1,25:26:69.22:868,69,0	1/1:5,15:20:45.13:553,45,0	1/1:3,17:20:45.14:566,45,0	1/1:0,9:9:21.07:264,21,0
chr10	61182854	.	T	TG	1360.44	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-9.303;DP=509;FS=0.690;HRun=0;HaplotypeScore=70.5337;InbreedingCoeff=0.9719;MQ=71.54;MQ0=0;MQRankSum=1.593;QD=42.51;ReadPosRankSum=-4.676;VQSLOD=2.1194;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:39.13:0,39,544	0/0:9,0:9:27.09:0,27,376	0/0:16,0:14:41.15:0,41,531	0/0:8,0:7:21.07:0,21,291	0/0:32,0:32:93.30:0,93,1274	0/0:28,0:28:84.28:0,84,1173	0/0:13,0:13:39.12:0,39,528	1/1:1,31:32:93.30:1455,93,0	0/0:16,0:16:48.16:0,48,671	0/0:27,0:27:81.27:0,81,1119	0/0:34,0:34:96.32:0,96,1341	0/0:12,0:12:36.12:0,36,503	0/0:10,0:10:27.09:0,27,378	0/0:13,0:13:36.12:0,36,501	0/0:18,0:18:54.16:0,54,737	0/0:11,0:11:30.09:0,30,403	0/0:10,0:10:24.08:0,24,335	0/0:10,0:10:24.08:0,24,330	0/0:14,0:14:39.13:0,39,544	0/0:36,0:36:99:0,108,1508	0/0:7,0:7:15.05:0,15,210	0/0:24,0:24:72.24:0,72,1005	0/0:27,0:27:81.26:0,81,1116	0/0:16,0:16:45.15:0,45,628	0/0:26,0:26:78.26:0,78,1079	0/0:14,0:14:42.14:0,42,588	0/0:20,0:20:57.18:0,57,779	0/0:11,0:11:24.08:0,24,329
chr10	61183133	.	CTAGATAAATATAGATATA	C	1663.44	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.307;DP=580;FS=0.000;HRun=0;HaplotypeScore=305.4313;InbreedingCoeff=0.9153;MQ=75.86;MQ0=0;MQRankSum=0.400;QD=53.66;ReadPosRankSum=-1.695;VQSLOD=2.3383;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:57.16:0,57,1474	0/0:11,0:11:27.09:0,27,972	0/0:20,0:20:57.89:0,58,1942	0/0:18,0:19:48.91:0,49,1469	0/0:29,0:29:84.26:0,84,2556	0/0:20,0:20:60.19:0,60,3814	0/0:16,0:16:48.13:0,48,2805	1/1:0,31:31:90.09:1758,90,0	0/0:20,0:20:46.31:0,46,1201	0/0:28,0:28:81.27:0,81,3083	0/0:30,0:30:90.27:0,90,3071	0/0:21,0:21:60.15:0,60,1955	0/0:11,0:11:24.08:0,24,986	0/0:23,0:23:60.18:0,60,2183	0/0:26,0:26:63.19:0,63,2235	0/0:15,0:15:39.09:0,39,1269	0/0:20,0:20:48.16:0,48,1378	0/0:5,0:5:9.03:0,9,265	0/0:16,0:16:48.14:0,48,1824	0/0:44,0:44:99:0,132,4483	0/0:20,0:20:45.14:0,45,1242	0/0:23,0:23:69.21:0,69,3986	0/0:25,0:25:75.24:0,75,4521	0/0:15,0:15:45.14:0,45,2938	0/0:15,0:15:30.10:0,30,1117	0/0:24,0:24:72.20:0,72,2779	0/0:28,0:28:69.18:0,69,2312	0/0:4,0:4:12.02:0,12,435
chr10	61183148	.	TATAGAG	T	9265.72	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=12.724;DP=570;FS=3.724;HRun=0;HaplotypeScore=139.6603;InbreedingCoeff=0.8494;MQ=71.89;MQ0=1;MQRankSum=-7.413;QD=23.46;ReadPosRankSum=-0.168;VQSLOD=4.3343;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,9:23:8.94:78,9,0	1/1:3,10:13:9.03:188,9,0	0/0:22,0:18:11.22:0,11,256	0/0:21,0:19:8.71:0,9,159	1/1:3,26:29:59.70:681,60,0	0/0:22,0:22:54.14:0,54,1384	0/0:14,0:14:39.12:0,39,984	0/0:32,0:32:0:0,0,0	1/1:7,7:14:6.02:126,6,0	1/1:9,20:29:60.04:974,60,0	1/1:5,23:28:62.67:1032,63,0	1/1:5,13:18:29.97:473,30,0	1/1:3,10:13:12.04:251,12,0	1/1:5,18:23:35.99:624,36,0	1/1:4,17:21:33.07:647,33,0	1/1:2,11:13:18.02:334,18,0	1/1:5,17:22:15.01:271,15,0	1/1:3,3:6:3.01:37,3,0	1/1:8,7:15:21.06:363,21,0	1/1:12,33:45:81.01:1263,81,0	1/1:8,8:16:6.02:126,6,0	0/0:25,0:25:54.16:0,54,1420	0/0:24,0:24:48.14:0,48,1217	0/0:15,0:15:33.06:0,33,884	1/1:1,15:16:20.94:311,21,0	1/1:6,16:22:48.12:860,48,0	1/1:9,15:24:21.07:438,21,0	1/1:0,5:5:9.03:188,9,0
chr10	61184352	.	AG	A	17994.08	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=8.625;DP=611;FS=6.351;HRun=1;HaplotypeScore=98.7858;InbreedingCoeff=0.8829;MQ=55.54;MQ0=13;MQRankSum=-0.626;QD=34.14;ReadPosRankSum=4.365;VQSLOD=4.5341;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,27:27:57.19:795,57,0	1/1:0,12:12:33.11:461,33,0	0/0:28,0:3:9.03:0,9,141	0/0:17,0:1:1.55:0,2,4	1/1:1,24:23:57.07:749,57,0	1/1:0,24:24:57.19:795,57,0	1/1:0,15:15:30.10:418,30,0	0/0:39,0:39:99:0,114,1777	1/1:0,25:24:63.21:880,63,0	1/1:0,34:32:93.29:1266,93,0	1/1:0,16:15:42.05:560,42,0	1/1:0,24:24:60.08:838,60,0	1/1:0,23:23:57.18:796,57,0	1/1:0,22:22:57.19:795,57,0	1/1:0,38:38:96.32:1341,96,0	1/1:0,19:19:54.18:754,54,0	1/1:0,19:19:42.14:586,42,0	1/1:0,9:8:24.08:332,24,0	1/1:0,23:20:60.20:838,60,0	1/1:0,29:28:84.24:1150,84,0	1/1:0,20:19:48.16:669,48,0	1/1:0,13:13:33.07:438,33,0	1/1:0,14:14:33.11:459,33,0	1/1:0,29:29:65.86:921,66,0	1/1:0,15:14:33.06:438,33,0	1/1:0,16:16:48.16:670,48,0	1/1:0,30:29:66.11:921,66,0	1/1:0,6:5:9.03:124,9,0
chr10	61184638	.	CA	C	6773.59	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=8.588;DP=470;FS=8.835;HRun=2;HaplotypeScore=57.6732;InbreedingCoeff=0.8854;MQ=71.03;MQ0=93;MQRankSum=-6.369;QD=17.11;ReadPosRankSum=1.672;VQSLOD=4.1863;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,15:11:27.02:329,27,0	1/1:0,7:5:12.04:155,12,0	0/0:25,0:25:75.24:0,75,1066	0/0:19,0:19:57.17:0,57,784	1/1:1,25:16:30.10:388,30,0	1/1:0,23:11:15.05:194,15,0	1/1:0,11:4:8.99:98,9,0	0/0:30,0:30:90.29:0,90,1314	1/1:5,17:9:23.99:264,24,0	1/1:0,20:12:32.96:414,33,0	1/1:0,11:7:9.03:117,9,0	1/1:0,21:14:36.07:447,36,0	1/1:0,19:7:18.06:233,18,0	1/1:0,13:9:24.08:310,24,0	1/1:6,20:13:32.99:350,33,0	1/1:0,10:7:18.06:233,18,0	1/1:1,11:9:18.06:233,18,0	1/1:0,6:5:15.05:194,15,0	1/1:2,10:5:12.02:140,12,0	1/1:1,26:12:27.09:350,27,0	1/1:3,8:11:17.81:192,18,0	1/1:1,12:9:18.06:233,18,0	1/1:0,15:12:33.11:426,33,0	1/1:0,9:5:15.05:194,15,0	1/1:0,8:6:15.05:194,15,0	1/1:1,22:8:21.07:269,21,0	1/1:0,31:23:54.18:697,54,0	1/1:0,4:3:9.03:117,9,0
chr10	61185508	.	A	AG	767.31	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.817;DP=483;FS=0.690;HRun=1;HaplotypeScore=132.7800;InbreedingCoeff=0.9925;MQ=79.96;MQ0=0;MQRankSum=-4.997;QD=31.97;ReadPosRankSum=-4.501;VQSLOD=2.1745;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:34.62:0,35,455	0/0:9,0:9:27.03:0,27,327	0/0:13,0:13:36.12:0,36,491	0/0:17,0:17:36.84:0,37,565	0/0:26,0:26:78.25:0,78,1010	0/0:16,0:16:48.15:0,48,620	0/0:14,0:14:36.91:0,37,498	1/1:4,20:24:72.22:862,72,0	0/0:19,0:19:54.12:0,54,665	0/0:23,0:23:60.01:0,60,705	0/0:25,0:25:69.88:0,70,866	0/0:15,0:15:45.15:0,45,580	0/0:15,0:15:40.62:0,41,544	0/0:18,0:18:51.16:0,51,657	0/0:16,0:16:48.15:0,48,608	0/0:15,0:15:39.06:0,39,477	0/0:7,0:7:21.03:0,21,260	0/0:9,0:9:27.09:0,27,354	0/0:15,0:15:33.77:0,34,453	0/0:29,0:29:78.53:0,79,990	0/0:20,0:20:60.19:0,60,771	0/0:17,0:17:42.64:0,43,549	0/0:18,0:18:54.08:0,54,665	0/0:13,0:13:33.11:0,33,426	0/0:27,0:27:81.26:0,81,1024	0/0:18,0:18:51.14:0,51,573	0/0:21,0:21:57.18:0,57,737	0/0:11,0:11:33.11:0,33,433
chr10	61185591	.	TTA	T	15917.27	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=6.304;DP=450;FS=4.958;HRun=0;HaplotypeScore=150.5601;InbreedingCoeff=0.9027;MQ=69.35;MQ0=0;MQRankSum=-1.659;QD=39.89;ReadPosRankSum=4.238;VQSLOD=6.1895;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,12:14:42.05:563,42,0	1/1:1,9:10:30.07:414,30,0	0/0:10,0:10:9.81:0,10,103	0/0:7,0:7:2.52:0,3,33	1/1:3,29:32:90:1152,90,0	1/1:5,9:14:42.07:549,42,0	1/1:0,6:6:18.06:271,18,0	0/0:34,0:34:21.76:0,22,642	1/1:5,10:15:41.96:516,42,0	1/1:2,19:21:63.08:880,63,0	1/1:4,24:28:80.94:1074,81,0	1/1:1,13:14:42.04:565,42,0	1/1:0,12:12:36.04:491,36,0	1/1:2,11:13:39.09:528,39,0	1/1:6,16:22:66.06:864,66,0	1/1:1,16:17:48.07:680,48,0	1/1:0,9:9:24.08:362,24,0	1/1:0,12:12:36.10:523,36,0	1/1:2,15:17:48.15:710,48,0	1/1:4,21:25:75.19:1053,75,0	1/1:2,7:9:26.97:335,27,0	1/1:2,14:16:48.02:630,48,0	1/1:1,13:14:42.01:544,42,0	1/1:2,8:10:30.02:404,30,0	1/1:4,11:15:44.65:548,45,0	1/1:6,14:20:59.82:785,60,0	1/1:4,22:26:78.22:1114,78,0	1/1:0,8:8:24.08:362,24,0
chr10	61185662	.	C	CT	16156.86	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=3.163;DP=502;FS=2.661;HRun=4;HaplotypeScore=122.0954;InbreedingCoeff=0.9903;MQ=68.87;MQ0=0;MQRankSum=-3.830;QD=36.23;ReadPosRankSum=6.664;VQSLOD=2.9704;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:2,12:14:36.12:492,36,0	1/1:0,11:11:30.10:410,30,0	0/0:16,0:16:37.50:0,37,358	0/0:13,0:13:30.07:0,30,332	1/1:0,27:28:75.25:1026,75,0	1/1:1,17:18:48.16:656,48,0	1/1:0,8:8:24.08:328,24,0	0/0:27,0:27:75.21:0,75,850	1/1:0,20:20:60.20:814,60,0	1/1:0,22:22:63.21:860,63,0	1/1:3,24:27:69.19:922,69,0	1/1:1,13:14:36.12:492,36,0	1/1:0,18:18:54.18:739,54,0	1/1:3,18:21:57.19:778,57,0	1/1:2,19:21:57.19:780,57,0	1/1:2,9:11:27.09:369,27,0	1/1:1,5:6:15.05:196,15,0	1/1:2,7:9:21.07:287,21,0	1/1:1,12:14:39.13:529,39,0	1/1:2,27:29:75.25:1026,75,0	1/1:1,9:10:24.08:321,24,0	1/1:2,15:17:45.15:608,45,0	1/1:3,20:23:57.19:780,57,0	1/1:3,12:15:30.08:402,30,0	1/1:0,16:16:48.16:650,48,0	1/1:3,27:30:87.29:1185,87,0	1/1:4,30:34:81.27:1108,81,0	1/1:0,10:10:30.10:399,30,0
chr10	61187993	.	GA	G	18436.10	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=3.490;DP=610;FS=0.000;HRun=3;HaplotypeScore=103.2764;InbreedingCoeff=0.9913;MQ=65.90;MQ0=0;MQRankSum=-5.363;QD=33.16;ReadPosRankSum=6.160;VQSLOD=4.2758;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,17:17:51.16:632,51,0	1/1:0,10:10:15.05:186,15,0	0/0:17,0:17:47.78:0,48,567	0/0:8,0:8:21.06:0,21,275	1/1:1,38:39:99:1225,99,0	1/1:1,26:27:66.21:818,66,0	1/1:1,16:17:42.13:521,42,0	0/0:29,0:29:84.28:0,84,1210	1/1:0,31:31:84.26:1041,84,0	1/1:0,27:27:78.24:965,78,0	1/1:0,23:23:57.18:705,57,0	1/1:3,18:21:48.15:595,48,0	1/1:2,24:25:69.22:853,69,0	1/1:1,23:24:57.18:703,57,0	1/1:0,18:18:54.17:669,54,0	1/1:0,24:24:72.23:892,72,0	1/1:2,19:21:54.17:669,54,0	1/1:0,12:12:30.09:372,30,0	1/1:1,18:19:54.15:647,54,0	1/1:3,32:35:90.28:1114,90,0	1/1:0,22:22:66.21:818,66,0	1/1:2,18:20:48.15:594,48,0	1/1:0,18:18:54.17:669,54,0	1/1:0,7:7:21.07:260,21,0	1/1:0,22:22:63.20:776,63,0	1/1:2,22:24:63.20:780,63,0	1/1:0,35:35:99:1299,105,0	1/1:0,17:17:51.16:632,51,0
chr10	61188285	.	CT	C	8362.81	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=0.779;DP=449;FS=2.627;HRun=9;HaplotypeScore=208.6421;InbreedingCoeff=0.7882;MQ=53.13;MQ0=6;MQRankSum=-2.312;QD=19.72;ReadPosRankSum=2.726;VQSLOD=2.7874;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,12:21:35.50:333,35,0	1/1:4,6:9:20.99:185,21,0	0/0:12,0:6:9.01:0,9,94	0/0:13,0:9:14.52:0,15,111	1/1:5,25:30:72.02:658,72,0	1/1:5,12:17:27.01:246,27,0	1/1:1,7:8:15.01:137,15,0	1/1:8,18:24:53.96:477,54,0	1/1:0,15:15:42.02:384,42,0	1/1:9,13:21:39:356,39,0	1/1:5,22:27:60.02:546,60,0	1/1:1,8:9:24.01:219,24,0	1/1:0,14:14:39.02:356,39,0	1/1:4,9:13:24.01:218,24,0	1/1:4,12:16:39.01:355,39,0	1/1:2,13:15:42.02:383,42,0	1/1:2,7:9:11.68:108,12,0	1/1:1,7:9:1.39:145,1,0	1/1:6,5:10:15.01:137,15,0	1/1:4,19:23:60.02:546,60,0	1/1:2,4:6:9:82,9,0	1/1:5,9:14:27:246,27,0	1/1:4,21:25:57.01:518,57,0	1/1:2,6:8:19.08:148,19,0	1/1:3,19:22:54.02:493,54,0	1/1:8,12:20:39:351,39,0	1/1:6,24:30:69.02:627,69,0	1/1:0,4:4:12.01:109,12,0
chr10	61188306	.	ACCGAACCCAGGG	A	28722.55	PASS	AB=0.731;AC=48;AF=0.857;AN=56;BaseQRankSum=5.261;DP=432;FS=3.023;HRun=0;HaplotypeScore=229.6698;InbreedingCoeff=0.3195;MQ=39.45;MQ0=47;MQRankSum=-3.880;QD=73.27;ReadPosRankSum=5.451;VQSLOD=4.7101;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:7,6:13:99:550,0,168	1/1:1,8:8:21.07:797,21,0	0/0:20,0:2:2.74:0,3,12	0/1:38,0:5:5.52:6,0,92	1/1:5,21:26:69.18:2292,69,0	1/1:3,7:10:21.05:707,21,0	1/1:1,3:4:9.03:342,9,0	0/0:20,0:17:45.15:0,45,2265	1/1:3,9:12:27.09:951,27,0	1/1:2,22:23:54.16:1875,54,0	1/1:3,17:20:51.17:1765,51,0	1/1:0,8:9:18.06:683,18,0	1/1:5,11:16:30.10:1139,30,0	1/1:2,11:13:30.10:1139,30,0	1/1:2,16:18:39.13:1480,39,0	1/1:3,9:12:30.08:961,30,0	1/1:3,0:3:3.01:38,3,0	0/1:1,3:4:99:291,0,140	1/1:4,7:7:21:612,21,0	1/1:1,30:31:69.24:2561,69,0	1/1:0,1:1:3.01:114,3,0	1/1:1,11:12:30.10:1138,30,0	1/1:1,22:23:60.21:2271,60,0	0/1:2,2:4:99:219,0,177	1/1:4,18:22:48.16:1822,48,0	1/1:2,19:20:54.09:1861,54,0	1/1:4,25:29:72.25:2654,72,0	1/1:2,5:6:12.04:456,12,0
chr10	61188425	.	T	TTAATACA	34894.80	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=0.062;DP=414;FS=3.813;HRun=0;HaplotypeScore=103.5327;InbreedingCoeff=0.7944;MQ=70.17;MQ0=0;MQRankSum=-8.469;QD=90.17;ReadPosRankSum=4.811;VQSLOD=5.4776;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,3:11:6.02:245,6,0	1/1:0,7:10:24.04:876,24,0	0/0:15,0:15:45.12:0,45,1011	0/0:12,0:12:32.92:0,33,826	1/1:1,21:25:66.19:2448,66,0	1/1:4,16:22:57.15:2194,57,0	1/1:3,5:9:18.06:668,18,0	1/1:9,8:29:81.25:2610,81,0	1/1:0,5:10:15.05:612,15,0	1/1:3,14:17:45.15:1806,45,0	1/1:1,23:30:69.24:2780,69,0	1/1:3,2:6:9.03:366,9,0	1/1:3,10:14:39.13:1532,39,0	1/1:2,7:13:24.04:875,24,0	1/1:4,10:17:39.09:1458,39,0	1/1:2,5:12:21.07:848,21,0	1/1:4,4:8:18.06:677,18,0	1/1:3,2:5:12.04:346,12,0	1/1:3,2:7:18.06:655,18,0	1/1:4,31:37:99:3892,102,0	1/1:0,2:5:6.02:244,6,0	1/1:1,11:14:39.09:1456,39,0	1/1:3,7:13:30.10:1209,30,0	1/1:0,2:3:6.02:244,6,0	1/1:1,17:21:54.19:2192,54,0	1/1:3,11:19:54.14:1928,54,0	1/1:4,16:26:60.12:2243,60,0	1/1:0,4:4:12.04:490,12,0
chr10	61189440	.	AC	A	15735.77	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=10.775;DP=583;FS=0.878;HRun=2;HaplotypeScore=101.8326;InbreedingCoeff=0.9936;MQ=80.01;MQ0=1;MQRankSum=-5.849;QD=32.65;ReadPosRankSum=9.807;VQSLOD=3.1819;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,17:17:36.12:467,36,0	1/1:0,11:11:30.10:389,30,0	0/0:37,0:37:99:0,102,1476	0/0:28,0:28:72.15:0,72,985	1/1:1,21:22:54.18:700,54,0	1/1:0,19:19:48.16:622,48,0	1/1:0,15:14:30.10:389,30,0	0/0:36,0:36:99:0,105,1563	1/1:1,19:20:45.08:562,45,0	1/1:0,24:24:72.23:935,72,0	1/1:0,23:22:57.19:739,57,0	1/1:0,17:16:39.13:506,39,0	1/1:2,25:27:72.18:913,72,0	1/1:0,13:13:39.13:506,39,0	1/1:0,25:25:66.21:856,66,0	1/1:0,19:19:48.16:623,48,0	1/1:1,13:14:39.13:506,39,0	1/1:0,7:7:18.06:234,18,0	1/1:1,17:15:42.14:545,42,0	1/1:3,21:24:54.18:701,54,0	1/1:0,27:26:69.22:895,69,0	1/1:1,15:16:33.11:428,33,0	1/1:3,24:27:60.14:758,60,0	1/1:0,13:13:36.12:467,36,0	1/1:0,20:20:48.16:623,48,0	1/1:0,25:25:75.24:973,75,0	1/1:0,33:33:90.29:1167,90,0	1/1:0,6:6:18.06:234,18,0
chr10	61190494	.	CT	C	11103.78	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=6.170;DP=476;FS=15.235;HRun=7;HaplotypeScore=48.9554;InbreedingCoeff=0.9677;MQ=75.47;MQ0=0;MQRankSum=-3.450;QD=26.07;ReadPosRankSum=6.616;VQSLOD=3.3336;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,12:16:34.07:364,34,0	1/1:1,9:10:27.06:275,27,0	0/0:10,0:11:23.93:0,24,268	0/0:9,0:9:15.05:0,15,189	1/1:2,20:22:57.13:581,57,0	1/1:2,15:17:39.08:398,39,0	1/1:0,10:10:30.07:306,30,0	0/0:30,0:30:81.25:0,81,1006	1/1:0,10:10:27.06:275,27,0	1/1:0,24:24:72.16:735,72,0	1/1:6,27:33:78.17:796,78,0	1/1:2,14:16:39.09:398,39,0	1/1:0,16:16:48.11:490,48,0	1/1:0,15:15:45.10:459,45,0	1/1:1,22:23:63.14:643,63,0	1/1:1,13:14:36.08:367,36,0	1/1:3,14:17:33.07:337,33,0	1/1:3,10:13:24.05:245,24,0	1/1:1,14:15:42.09:428,42,0	1/1:5,19:24:51.10:518,51,0	1/1:0,7:7:18.04:184,18,0	1/1:1,8:9:24.05:245,24,0	1/1:0,19:19:51.12:520,51,0	1/1:1,3:4:9.02:92,9,0	1/1:0,33:33:93.21:949,93,0	1/1:4,14:18:42.09:428,42,0	1/1:2,20:22:57.12:582,57,0	1/1:3,16:19:48.11:490,48,0
chr10	61191072	.	A	AT	12591.22	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-0.646;DP=444;FS=9.020;HRun=5;HaplotypeScore=56.3836;InbreedingCoeff=0.9388;MQ=62.08;MQ0=0;MQRankSum=0.506;QD=32.04;ReadPosRankSum=4.503;VQSLOD=5.0742;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,30:33:69.16:872,69,0	1/1:1,9:10:27.09:355,27,0	0/0:13,0:9:17.93:0,18,171	0/0:13,0:11:12.01:0,12,115	1/1:0,19:19:54.18:710,54,0	1/1:0,20:20:57.19:750,57,0	1/1:1,8:9:21.07:276,21,0	0/0:25,0:25:57.13:0,57,607	1/1:0,7:7:15.05:197,15,0	1/1:7,20:27:63.19:812,63,0	1/1:2,18:20:48.16:632,48,0	1/1:3,7:10:13.66:230,14,0	1/1:1,11:12:30.10:395,30,0	1/1:3,11:14:30.10:395,30,0	1/1:3,7:10:18.06:237,18,0	1/1:0,18:18:51.17:671,51,0	1/1:2,15:17:39.13:514,39,0	1/1:2,19:21:54.15:694,54,0	1/1:2,14:15:41.79:508,42,0	1/1:1,16:17:45.15:592,45,0	1/1:1,10:11:27.09:355,27,0	1/1:0,6:6:15.05:197,15,0	1/1:0,7:7:18.06:237,18,0	1/1:0,4:4:9.03:118,9,0	1/1:0,22:22:60.20:790,60,0	1/1:2,17:19:51.17:671,51,0	1/1:4,31:35:81.26:1066,81,0	1/1:0,9:9:24.08:316,24,0
chr10	61192261	.	AT	A	2950.13	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=6.664;DP=692;FS=10.003;HRun=6;HaplotypeScore=98.0590;InbreedingCoeff=0.9995;MQ=64.02;MQ0=1;MQRankSum=0.912;QD=25.21;ReadPosRankSum=3.691;VQSLOD=3.0654;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:75.18:0,75,949	0/0:10,0:10:30.09:0,30,380	0/0:28,1:23:35.57:0,36,638	0/0:22,0:19:33.76:0,34,385	0/0:32,0:32:90.21:0,90,1160	1/1:2,16:18:39.10:419,39,0	1/1:0,20:20:51.13:548,51,0	0/0:35,0:35:99:0,102,1330	0/0:24,0:24:72.22:0,72,933	0/0:35,0:35:93.30:0,93,1222	0/0:22,0:22:60.16:0,60,745	0/0:18,0:18:48.16:0,48,632	0/0:31,0:31:90.28:0,90,1170	0/0:23,0:23:53.84:0,54,794	0/0:27,0:27:69.20:0,69,881	0/0:14,0:14:39.13:0,39,513	0/0:19,0:19:54.15:0,54,693	0/0:11,0:11:30.04:0,30,360	0/0:26,0:26:72.20:0,72,914	0/0:29,0:29:84.25:0,84,1078	0/0:36,0:36:99:0,102,1282	1/1:1,16:17:45.11:483,45,0	1/1:2,37:39:92.97:999,93,0	1/1:1,22:23:62.95:677,63,0	0/0:30,0:30:84.27:0,84,1104	0/0:27,0:27:78.25:0,78,1026	0/0:35,0:34:99:0,99,1282	0/0:11,0:11:30.10:0,30,395
chr10	61192575	.	TG	T	18175.61	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=9.166;DP=584;FS=4.755;HRun=2;HaplotypeScore=133.6854;InbreedingCoeff=0.9791;MQ=48.91;MQ0=5;MQRankSum=0.034;QD=35.43;ReadPosRankSum=6.350;VQSLOD=3.8736;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,16:16:48.15:616,48,0	1/1:0,7:7:21.07:273,21,0	0/0:27,0:11:33.11:0,33,494	0/0:15,0:8:21.01:0,21,273	1/1:1,33:34:96.29:1213,96,0	1/1:1,20:21:57.19:738,57,0	1/1:4,7:10:24.06:296,24,0	0/0:29,0:26:69.23:0,69,1015	1/1:1,22:23:63.20:814,63,0	1/1:3,29:32:84.27:1090,84,0	1/1:1,26:27:78.25:1007,78,0	1/1:1,14:15:42.14:540,42,0	1/1:5,20:25:72.22:913,72,0	1/1:2,17:19:57.19:739,57,0	1/1:2,25:27:75.24:973,75,0	1/1:1,18:19:54.18:700,54,0	1/1:1,6:7:15.05:194,15,0	1/1:0,5:5:12.04:156,12,0	1/1:0,15:14:39.13:505,39,0	1/1:2,33:35:99:1308,102,0	1/1:3,16:19:45.15:584,45,0	1/1:2,22:24:69.21:882,69,0	1/1:1,18:19:57.19:740,57,0	1/1:3,19:22:57.15:709,57,0	1/1:0,24:24:66.21:856,66,0	1/1:1,29:30:84.27:1087,84,0	1/1:3,26:29:72.23:931,72,0	1/1:0,8:8:24.08:311,24,0
chr10	61192755	.	A	AC	15403.81	PASS	AC=54;AF=1.000;AN=54;DP=414;FS=0.000;HRun=0;HaplotypeScore=185.2698;InbreedingCoeff=-0.0138;MQ=32.53;MQ0=0;QD=37.66;VQSLOD=3.9677;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,6:6:15.05:239,15,0	1/1:1,6:7:15.05:239,15,0	1/1:3,8:3:5.98:53,6,0	./.	1/1:0,34:34:84.28:1307,84,0	1/1:1,22:23:57.19:895,57,0	1/1:1,9:8:21.07:335,21,0	1/1:1,16:13:21.07:335,21,0	1/1:1,12:13:30.06:450,30,0	1/1:2,19:21:48.16:765,48,0	1/1:3,17:20:45.15:715,45,0	1/1:1,11:12:33.11:525,33,0	1/1:2,17:19:48.16:763,48,0	1/1:1,9:10:30.10:466,30,0	1/1:0,15:15:36.12:560,36,0	1/1:0,19:19:54.18:859,54,0	1/1:0,3:3:9.03:143,9,0	1/1:0,4:4:9.03:143,9,0	1/1:3,11:14:36.09:548,36,0	1/1:0,31:31:84.28:1311,84,0	1/1:1,4:5:12.04:191,12,0	1/1:1,17:18:48.16:750,48,0	1/1:1,23:24:69.23:1069,69,0	1/1:1,7:8:11.87:178,12,0	1/1:1,21:22:54.18:848,54,0	1/1:2,12:14:36.12:573,36,0	1/1:0,25:24:63.21:1001,63,0	1/1:0,3:3:9.03:143,9,0
chr10	61192785	.	T	TC	13562.54	PASS	AC=54;AF=0.964;AN=56;BaseQRankSum=-1.327;DP=363;FS=0.000;HRun=0;HaplotypeScore=165.5457;InbreedingCoeff=0.5947;MQ=33.77;MQ0=0;MQRankSum=-2.441;QD=37.67;ReadPosRankSum=0.163;VQSLOD=4.0975;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,8:8:21.07:334,21,0	1/1:0,6:6:15.05:239,15,0	1/1:2,4:2:3.01:48,3,0	0/0:3,0:2:5.93:0,6,58	1/1:1,30:31:75.17:1158,75,0	1/1:1,17:18:42.14:667,42,0	1/1:0,7:7:18.06:286,18,0	1/1:3,9:10:18.05:259,18,0	1/1:0,11:11:24.08:382,24,0	1/1:3,23:26:63.21:981,63,0	1/1:0,21:21:48.08:732,48,0	1/1:0,12:12:33.11:515,33,0	1/1:1,12:13:33.11:525,33,0	1/1:1,7:8:21.07:334,21,0	1/1:0,14:14:36.12:572,36,0	1/1:0,13:13:36.05:543,36,0	1/1:0,3:3:5.99:95,6,0	1/1:1,4:5:12.04:191,12,0	1/1:1,8:8:24.08:378,24,0	1/1:0,23:23:60.20:952,60,0	1/1:0,6:6:15.05:239,15,0	1/1:2,21:23:60.13:910,60,0	1/1:3,19:22:51.16:786,51,0	1/1:0,6:6:12.04:176,12,0	1/1:1,21:22:60.20:944,60,0	1/1:1,16:17:42.14:670,42,0	1/1:0,13:13:30.10:468,30,0	1/1:2,3:5:14.91:179,15,0
chr10	61192832	.	T	TA	14118.99	PASS	AB=1.000;AC=55;AF=0.982;AN=56;BaseQRankSum=-2.571;DP=462;FS=3.788;HRun=0;HaplotypeScore=166.0590;InbreedingCoeff=-0.0210;MQ=44.72;MQ0=2;MQRankSum=-0.213;QD=30.56;ReadPosRankSum=1.403;VQSLOD=4.5070;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,12:14:27.03:336,27,0	1/1:1,6:7:17.95:215,18,0	1/1:5,7:6:10.57:102,11,0	0/1:11,0:4:30.27:52,0,30	1/1:4,23:27:62.38:819,62,0	1/1:8,17:25:62.88:723,63,0	1/1:0,12:9:24.08:317,24,0	1/1:1,30:30:71.45:890,71,0	1/1:1,14:15:42.07:541,42,0	1/1:2,25:27:78.21:1009,78,0	1/1:1,21:22:59.85:732,60,0	1/1:1,14:15:42.05:535,42,0	1/1:1,15:16:42.05:517,42,0	1/1:0,11:11:30.10:388,30,0	1/1:3,12:15:36.05:461,36,0	1/1:2,16:18:48.02:597,48,0	1/1:2,8:10:21.02:251,21,0	1/1:0,12:12:36.12:474,36,0	1/1:4,7:10:24.02:296,24,0	1/1:3,17:20:51.17:674,51,0	1/1:1,11:11:18.06:235,18,0	1/1:1,26:27:77.78:942,78,0	1/1:4,14:18:44.73:515,45,0	1/1:2,9:11:23.64:317,24,0	1/1:3,14:17:47.94:569,48,0	1/1:1,20:21:57.18:733,57,0	1/1:2,16:18:47.75:645,48,0	1/1:0,7:7:18.06:236,18,0
chr10	61193391	.	AG	A	1773.17	PASS	AB=0.969;AC=14;AF=0.250;AN=56;BaseQRankSum=-3.248;DP=436;FS=0.000;HRun=1;HaplotypeScore=146.9325;InbreedingCoeff=0.5748;MQ=62.73;MQ0=0;MQRankSum=0.131;QD=15.16;ReadPosRankSum=-0.862;VQSLOD=3.1023;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:9.93:0,10,200	0/1:6,1:7:17.67:18,0,52	0/0:19,0:18:49.67:0,50,726	0/0:20,0:19:54.12:0,54,780	0/0:12,0:12:24.76:0,25,111	1/1:3,17:20:47.53:626,48,0	1/1:1,10:11:27.08:335,27,0	0/0:40,0:40:99:0,120,1914	0/0:13,0:13:7.52:0,8,139	0/0:20,0:20:18.63:0,19,206	0/0:7,0:7:8.10:0,8,35	0/0:11,0:11:10.92:0,11,124	0/0:14,0:14:32.68:0,33,144	0/0:16,0:16:30.48:0,30,147	0/1:18,0:18:20.58:21,0,138	0/0:12,0:12:11.68:0,12,142	0/0:24,0:25:55.44:0,55,292	0/0:15,0:15:29.14:0,29,145	0/1:14,0:12:20.90:21,0,89	0/0:15,0:15:16.91:0,17,143	0/0:16,0:16:21.05:0,21,109	1/1:0,12:12:18.01:205,18,0	1/1:0,10:10:21.07:261,21,0	1/1:0,14:14:36.11:444,36,0	0/1:11,0:11:27.68:28,0,53	0/0:24,0:24:45.22:0,45,299	0/0:14,0:14:28.90:0,29,152	0/0:7,0:7:16.86:0,17,81
chr10	61194732	.	G	GTTT	9616.29	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=3.433;DP=472;FS=3.048;HRun=8;HaplotypeScore=149.7652;InbreedingCoeff=0.7585;MQ=59.61;MQ0=1;MQRankSum=-7.490;QD=22.16;ReadPosRankSum=-0.799;VQSLOD=1.6763;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:9,0:12:11.01:93,11,0	1/1:5,0:12:24.06:318,24,0	0/0:19,0:16:30.04:0,30,357	0/0:18,0:18:39.99:0,40,478	1/1:19,1:26:41.85:431,42,0	1/1:3,12:15:33.11:667,33,0	1/1:3,13:16:42.14:799,42,0	1/1:2,0:28:30.01:66,30,0	1/1:10,0:13:12:143,12,0	1/1:13,0:21:45.10:597,45,0	1/1:24,0:31:45.71:476,46,0	1/1:7,0:10:14.05:143,14,0	1/1:14,0:19:23.99:266,24,0	1/1:17,1:20:26.98:300,27,0	1/1:13,0:19:29.85:358,30,0	1/1:11,0:17:33.01:403,33,0	1/1:5,0:6:3.01:43,3,0	1/1:2,0:3:6.02:86,6,0	1/1:11,1:18:42.06:500,42,0	1/1:29,1:41:81.06:955,81,0	1/1:8,0:8:10.03:64,10,0	1/1:2,11:13:33.07:534,33,0	1/1:2,13:17:42.12:711,42,0	1/1:0,3:3:6.02:121,6,0	1/1:10,1:16:27.48:307,27,0	1/1:19,1:22:40.73:464,41,0	1/1:17,0:22:51.10:639,51,0	1/1:6,0:6:8.99:133,9,0
chr10	61196293	.	C	CTA	25154.64	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=7.732;DP=607;FS=9.381;HRun=0;HaplotypeScore=130.5706;InbreedingCoeff=0.9993;MQ=70.82;MQ0=0;MQRankSum=-6.876;QD=45.90;ReadPosRankSum=6.454;VQSLOD=5.6161;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,35:38:96.33:1758,96,0	1/1:0,12:12:27.09:495,27,0	0/0:14,0:14:36.12:0,36,506	0/0:14,0:14:39.12:0,39,528	1/1:2,24:26:48.16:878,48,0	1/1:1,21:22:54.19:989,54,0	1/1:1,21:23:66.23:1206,66,0	0/0:31,0:31:90.30:0,90,1289	1/1:1,19:20:60.21:1094,60,0	1/1:8,14:22:54.18:954,54,0	1/1:1,18:19:36.12:659,36,0	1/1:0,20:20:48.16:879,48,0	1/1:2,23:25:63.22:1154,63,0	1/1:2,18:20:45.15:825,45,0	1/1:0,23:23:66.23:1208,66,0	1/1:1,18:19:48.16:879,48,0	1/1:0,16:16:48.16:879,48,0	1/1:3,11:15:36.12:658,36,0	1/1:3,11:13:33.11:605,33,0	1/1:1,30:30:78.27:1429,78,0	1/1:1,16:18:45.15:825,45,0	1/1:0,16:16:45.15:824,45,0	1/1:0,22:22:51.17:935,51,0	1/1:2,16:18:42.14:769,42,0	1/1:1,34:36:90.31:1648,90,0	1/1:0,24:24:69.24:1264,69,0	1/1:2,30:32:81.28:1482,81,0	1/1:0,16:16:48.16:859,48,0
chr10	61196424	.	A	AG	20076.71	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=3.386;DP=535;FS=1.007;HRun=0;HaplotypeScore=175.3870;InbreedingCoeff=0.9589;MQ=58.17;MQ0=0;MQRankSum=-12.035;QD=43.27;ReadPosRankSum=6.119;VQSLOD=3.7871;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,26:28:72.21:1118,72,0	1/1:0,6:6:18.06:287,18,0	0/0:18,0:19:51.06:0,51,688	0/0:25,0:25:72.23:0,72,987	1/1:0,29:29:75.26:1193,75,0	1/1:1,23:24:72.23:1124,72,0	1/1:0,14:14:42.14:670,42,0	0/0:27,0:27:81.25:0,81,1101	1/1:0,9:9:27.09:431,27,0	1/1:1,22:23:66.23:1053,66,0	1/1:2,23:25:69.24:1098,69,0	1/1:0,15:15:42.14:670,42,0	1/1:2,23:25:69.24:1097,69,0	1/1:2,12:14:42.14:667,42,0	1/1:0,17:17:45.15:717,45,0	1/1:0,17:17:45.15:718,45,0	1/1:0,10:10:24.08:382,24,0	1/1:0,10:10:27.09:431,27,0	1/1:0,14:14:39.13:623,39,0	1/1:2,24:25:75.22:1147,75,0	1/1:0,10:10:27.09:430,27,0	1/1:2,20:22:66.21:1025,66,0	1/1:3,20:23:63.21:1003,63,0	1/1:2,12:14:27.09:430,27,0	1/1:4,25:28:72.24:1148,72,0	1/1:2,23:25:69.23:1093,69,0	1/1:1,32:33:90.31:1435,90,0	1/1:1,1:2:6.02:88,6,0
chr10	61196534	.	T	TA	16633.27	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=5.535;DP=593;FS=3.263;HRun=6;HaplotypeScore=96.6571;InbreedingCoeff=0.9991;MQ=63.46;MQ0=0;MQRankSum=-4.712;QD=31.44;ReadPosRankSum=7.452;VQSLOD=3.7731;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,20:25:63.13:745,63,0	1/1:1,9:10:27.09:340,27,0	0/0:15,0:15:36.07:0,36,359	0/0:15,0:15:39.06:0,39,383	1/1:4,22:26:54.17:668,54,0	1/1:5,14:19:42.13:522,42,0	1/1:3,13:16:42.04:492,42,0	0/0:34,0:33:84.17:0,84,851	1/1:3,13:16:39.12:490,39,0	1/1:7,23:30:44.61:847,45,0	1/1:2,32:34:93.30:1170,93,0	1/1:4,9:13:33.06:397,33,0	1/1:2,16:18:54.15:653,54,0	1/1:1,10:11:30.10:377,30,0	1/1:2,13:15:42.12:515,42,0	1/1:3,15:18:45.14:566,45,0	1/1:1,22:23:63.07:752,63,0	1/1:2,15:16:45.14:566,45,0	1/1:4,18:22:54.17:679,54,0	1/1:5,36:41:99:1345,111,0	1/1:1,12:13:35.99:414,36,0	1/1:6,16:22:45.14:566,45,0	1/1:3,26:29:75.20:925,75,0	1/1:2,13:15:36.11:451,36,0	1/1:1,26:27:78.24:971,78,0	1/1:3,15:18:45.14:566,45,0	1/1:6,27:33:87.28:1089,87,0	1/1:0,18:18:42.13:528,42,0
chr10	61196596	.	TA	T	12311.20	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=5.091;DP=521;FS=2.964;HRun=7;HaplotypeScore=72.8597;InbreedingCoeff=0.9393;MQ=58.42;MQ0=0;MQRankSum=-3.055;QD=26.03;ReadPosRankSum=6.567;VQSLOD=4.9434;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:1,26:27:69.07:690,69,0	1/1:0,9:9:27.06:275,27,0	0/0:8,0:6:4.48:0,4,162	0/0:12,0:11:20.51:0,21,207	1/1:0,27:27:75.10:744,75,0	1/1:2,18:20:54.12:551,54,0	1/1:1,7:8:21.05:214,21,0	0/0:28,0:28:78.24:0,78,961	1/1:0,18:18:48.11:490,48,0	1/1:3,20:23:63.14:642,63,0	1/1:3,18:21:51.11:520,51,0	1/1:1,13:14:36.08:367,36,0	1/1:2,19:21:33.23:499,33,0	1/1:2,9:11:24.05:244,24,0	1/1:2,13:15:36.08:367,36,0	1/1:3,9:12:30.05:299,30,0	1/1:3,21:24:57.02:571,57,0	1/1:0,19:19:51.11:520,51,0	1/1:0,16:16:48.11:489,48,0	1/1:2,41:43:99:1152,114,0	1/1:3,7:10:21.04:214,21,0	1/1:2,17:19:45.10:458,45,0	1/1:3,25:28:75.17:764,75,0	1/1:4,6:10:18.04:183,18,0	1/1:3,21:24:57.13:581,57,0	1/1:2,19:21:57.13:581,57,0	1/1:6,19:25:68.98:659,69,0	1/1:1,7:8:24.04:237,24,0
chr10	61196888	.	G	GA	2742.84	PASS	AB=0.790;AC=22;AF=0.393;AN=56;BaseQRankSum=16.652;DP=832;FS=12.953;HRun=4;HaplotypeScore=99.6876;InbreedingCoeff=-0.6559;MQ=50.02;MQ0=42;MQRankSum=-11.940;QD=4.09;ReadPosRankSum=2.833;VQSLOD=-0.4321;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:32,8:39:51.61:52,0,812	0/1:10,4:14:86.65:87,0,270	0/0:30,0:3:9.03:0,9,101	0/0:23,0:4:6.01:0,6,61	0/1:32,7:37:64.40:64,0,886	0/1:22,11:32:99:164,0,620	0/0:29,0:28:69.18:0,69,772	0/0:35,0:33:75.16:0,75,828	0/1:21,11:30:99:167,0,553	0/1:28,6:32:99:153,0,750	0/1:21,6:28:99:106,0,582	0/1:20,9:27:99:176,0,506	0/1:17,9:25:99:226,0,382	0/1:12,9:19:39.59:40,0,366	0/1:26,10:35:99:114,0,741	0/1:19,7:25:99:135,0,543	0/1:27,8:33:41.60:42,0,735	0/1:24,6:29:6.79:7,0,662	0/1:29,3:28:47.57:48,0,652	0/1:27,6:33:32.61:33,0,817	0/1:22,9:30:99:167,0,602	0/1:20,12:32:99:287,0,529	0/0:17,1:18:13.38:0,13,521	0/0:25,1:25:75.19:0,75,831	0/1:20,12:30:99:328,0,473	0/1:15,6:20:99:154,0,334	0/1:35,6:37:55.27:55,0,970	0/1:15,10:24:99:297,0,427
chr10	61197084	.	TC	T	21293.62	PASS	AB=0.588;AC=37;AF=0.661;AN=56;BaseQRankSum=-8.872;DP=864;FS=55.005;HRun=1;HaplotypeScore=226.9897;InbreedingCoeff=-0.0317;MQ=56.41;MQ0=17;MQRankSum=15.570;QD=27.44;ReadPosRankSum=7.326;VQSLOD=0.3626;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,48:50:23.34:1523,23,0	1/1:0,15:15:36.12:503,36,0	0/0:33,0:27:69.22:0,69,1071	0/0:23,0:20:56.97:0,57,773	1/1:1,26:27:66.22:920,66,0	0/1:11,20:29:99:575,0,309	0/1:10,22:28:99:524,0,270	0/0:32,0:21:57.14:0,57,862	0/1:13,33:43:99:1114,0,319	1/1:2,30:32:42.39:1126,42,0	1/1:0,16:16:45.15:629,45,0	0/1:13,14:26:99:434,0,454	0/1:9,16:25:99:485,0,270	0/1:6,26:30:64.47:886,0,64	0/1:21,28:47:99:961,0,630	0/1:12,19:31:99:593,0,389	0/1:4,30:32:8.11:1045,0,8	1/1:4,27:29:9.65:899,10,0	0/1:7,24:31:99:836,0,220	1/1:0,35:35:99:1341,99,0	1/1:4,37:39:81.35:1324,81,0	0/1:2,20:22:13.47:554,0,13	1/1:0,21:21:57.08:769,57,0	1/1:2,30:32:27.69:959,28,0	1/1:0,29:29:78.19:1067,78,0	0/1:10,18:28:99:644,0,354	0/1:9,35:43:99:1080,0,225	1/1:0,14:14:36.12:503,36,0
chr10	61197091	.	CA	C	2019.07	PASS	AB=0.786;AC=11;AF=0.196;AN=56;BaseQRankSum=15.829;DP=881;FS=88.741;HRun=2;HaplotypeScore=294.6975;InbreedingCoeff=-0.2451;MQ=57.92;MQ0=12;MQRankSum=-14.917;QD=5.34;ReadPosRankSum=0.735;VQSLOD=-0.0591;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:48,2:49:55.06:0,55,1684	0/0:15,0:15:39.09:0,39,559	0/0:40,1:34:93.21:0,93,1280	0/0:25,0:23:63.14:0,63,869	0/0:24,0:24:72.24:0,72,1075	0/1:23,9:30:99:195,0,731	0/1:21,9:26:99:164,0,701	0/0:28,0:23:63.18:0,63,903	0/1:32,10:38:99:129,0,1169	0/0:32,2:34:33.90:0,34,1330	0/0:19,0:19:54.14:0,54,780	0/1:18,13:30:99:295,0,621	0/1:22,7:29:99:163,0,723	0/1:24,5:27:55.43:55,0,948	0/1:29,20:46:99:477,0,1116	0/1:21,11:31:99:258,0,722	0/0:34,1:34:87.29:0,87,1294	0/0:27,2:26:66.22:0,66,987	0/1:26,5:31:83.78:84,0,988	0/0:38,0:38:99:0,108,1614	0/0:38,1:38:99:0,99,1461	0/0:18,1:19:17.01:0,17,683	0/0:22,0:22:60.20:0,60,896	0/0:34,3:37:24.93:0,25,1209	0/0:32,0:32:87.29:0,87,1302	0/1:22,9:31:99:218,0,846	0/1:34,8:41:99:131,0,1183	0/0:16,0:16:42.14:0,42,629
chr10	61197149	.	CTT	C	75.94	PASS	AB=0.810;AC=6;AF=0.115;AN=52;BaseQRankSum=12.888;DP=906;FS=113.192;HRun=2;HaplotypeScore=207.0066;InbreedingCoeff=-0.1341;MQ=48.16;MQ0=99;MQRankSum=-12.344;QD=0.36;ReadPosRankSum=0.251;VQSLOD=0.3883;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:52,2:52:99:0,119,2516	0/0:13,0:13:36.12:0,36,697	./.	./.	0/0:21,1:21:42.20:0,42,990	0/1:22,11:27:28.69:29,0,934	0/0:21,2:21:26.08:0,26,985	0/0:46,0:28:81.21:0,81,1437	0/0:26,4:27:19.72:0,20,1047	0/1:36,6:41:52.66:53,0,1907	0/0:21,1:21:47.17:0,47,1051	0/0:19,4:22:19.72:0,20,1054	0/0:30,4:32:29.28:0,29,1414	0/0:27,4:26:33.53:0,34,1081	0/1:28,10:33:9.54:10,0,1342	0/0:28,8:33:5.19:0,5,1320	0/0:43,1:42:98.42:0,98,1995	0/0:30,1:26:51.47:0,51,1290	0/0:24,1:16:25.47:0,25,837	0/0:45,0:45:99:0,132,2563	0/0:36,0:34:96.27:0,96,1812	0/0:22,3:25:28.42:0,28,1092	0/0:19,0:17:51.16:0,51,967	0/0:31,3:34:47.59:0,48,1531	0/0:35,0:35:99:0,99,1920	0/1:30,7:32:19.27:19,0,1488	0/1:34,12:39:54.70:55,0,1418	0/1:13,4:15:31.43:31,0,513
chr10	61197262	.	C	CCA	3675.88	PASS	AB=0.832;AC=18;AF=0.321;AN=56;BaseQRankSum=9.257;DP=855;FS=35.777;HRun=0;HaplotypeScore=214.1919;InbreedingCoeff=-0.4677;MQ=62.92;MQ0=2;MQRankSum=-13.919;QD=6.68;ReadPosRankSum=0.315;VQSLOD=1.8322;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,5:51:17.11:0,17,1938	0/1:9,12:18:99:376,0,360	0/0:31,0:26:75.20:0,75,1084	0/0:32,0:30:80.67:0,81,1196	0/1:35,13:47:99:567,0,1218	0/1:15,4:20:99:178,0,634	0/0:25,0:25:72.20:0,72,1076	0/0:23,2:25:11.86:0,12,956	0/1:21,3:24:99:110,0,897	0/1:29,5:33:86.08:86,0,1175	0/1:28,5:32:96.39:96,0,1156	0/1:28,4:32:99:149,0,1176	0/1:12,2:14:78.98:79,0,511	0/0:35,2:37:44.86:0,45,1517	0/1:30,4:33:75.40:75,0,1338	0/1:19,4:23:99:176,0,796	0/1:38,3:41:0.61:1,0,1641	0/0:23,2:25:5.51:0,6,916	0/1:25,2:26:46.21:46,0,1017	0/1:30,10:41:99:237,0,1260	0/0:30,0:30:90.28:0,90,1391	0/1:31,8:38:99:329,0,1323	0/1:23,11:34:99:333,0,964	0/1:14,4:18:99:131,0,571	0/1:23,11:34:99:491,0,980	0/0:26,2:27:20.31:0,20,1158	0/1:25,5:31:99:216,0,1012	0/0:18,0:18:54.18:0,54,862
chr10	61198464	.	G	GGACT	28481.75	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=7.929;DP=631;FS=3.688;HRun=0;HaplotypeScore=157.1497;InbreedingCoeff=0.9401;MQ=53.94;MQ0=0;MQRankSum=-11.638;QD=52.94;ReadPosRankSum=7.453;VQSLOD=5.4622;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:11,29:42:78.27:2012,78,0	1/1:1,9:10:24.08:622,24,0	0/0:32,0:28:57.63:0,58,949	0/0:25,0:24:60.21:0,60,1044	1/1:3,13:17:33.11:840,33,0	1/1:4,23:25:51.18:1307,51,0	1/1:5,21:25:46.28:1560,46,0	0/0:36,0:36:81.26:0,81,1403	1/1:3,17:20:39.13:1010,39,0	1/1:7,18:27:63.21:1546,63,0	1/1:3,13:17:42.14:1076,42,0	1/1:3,10:14:27.09:699,27,0	1/1:5,24:29:78.27:1975,78,0	1/1:6,21:26:9.33:1497,9,0	1/1:5,25:29:69.24:1788,69,0	1/1:6,19:22:54.18:1378,54,0	1/1:3,9:12:24.08:621,24,0	1/1:6,6:13:21.07:538,21,0	1/1:8,7:13:27.09:652,27,0	1/1:7,10:17:24.08:608,24,0	1/1:8,9:16:21.07:533,21,0	1/1:5,25:31:66.23:1707,66,0	1/1:8,17:24:45.15:1162,45,0	1/1:7,11:18:36.12:931,36,0	1/1:2,14:15:39.13:1011,39,0	1/1:4,18:21:48.16:1245,48,0	1/1:7,26:32:78.27:2009,78,0	1/1:1,2:3:6.02:156,6,0
chr10	61198812	.	AG	A	12931.87	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=11.783;DP=477;FS=1.701;HRun=1;HaplotypeScore=182.8626;InbreedingCoeff=0.9336;MQ=57.62;MQ0=0;MQRankSum=-10.233;QD=31.16;ReadPosRankSum=6.170;VQSLOD=4.3665;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,31:31:68.48:746,68,0	1/1:0,1:1:3.01:37,3,0	0/0:17,0:17:50.84:0,51,748	0/0:20,0:20:43.33:0,43,740	1/1:0,16:16:39.12:474,39,0	1/1:0,15:12:33.06:383,33,0	1/1:1,25:25:65.72:803,66,0	0/0:25,0:25:75.26:0,75,1199	1/1:0,21:21:60.14:713,60,0	1/1:0,20:20:60.19:735,60,0	1/1:0,14:13:36.11:438,36,0	1/1:0,21:20:57.14:669,57,0	1/1:0,23:23:66.21:806,66,0	1/1:0,19:19:54.17:661,54,0	1/1:0,20:20:57.18:695,57,0	1/1:0,19:18:54.14:638,54,0	1/1:1,19:20:47.66:586,48,0	1/1:0,11:11:24.07:289,24,0	1/1:0,16:15:45.14:546,45,0	1/1:0,11:10:30.06:347,30,0	1/1:0,13:13:24.07:285,24,0	1/1:0,12:12:29.59:367,30,0	1/1:0,14:14:42.09:493,42,0	1/1:2,9:11:18.05:217,18,0	1/1:0,15:15:42.13:507,42,0	1/1:0,23:23:69.18:820,69,0	1/1:0,14:14:39.08:459,39,0	1/1:0,9:9:18.06:215,18,0
chr10	61198934	.	GGC	G	20348.44	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=8.237;DP=582;FS=0.000;HRun=0;HaplotypeScore=147.5509;InbreedingCoeff=0.9778;MQ=53.87;MQ0=2;MQRankSum=-1.306;QD=39.36;ReadPosRankSum=7.049;VQSLOD=5.4335;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,31:32:81.28:1239,81,0	1/1:2,11:13:36.12:551,36,0	0/0:15,0:12:36.12:0,36,679	0/0:20,0:20:57.19:0,57,1060	1/1:4,26:30:51.17:778,51,0	1/1:2,12:14:33.11:505,33,0	1/1:2,23:25:66.22:1010,66,0	0/0:30,0:30:81.28:0,81,1562	1/1:0,23:23:63.21:964,63,0	1/1:0,26:25:69.22:1035,69,0	1/1:0,13:13:33.11:504,33,0	1/1:2,18:20:54.18:823,54,0	1/1:1,17:18:51.14:755,51,0	1/1:1,14:15:36.12:549,36,0	1/1:0,20:20:57.19:872,57,0	1/1:0,21:21:63.21:963,63,0	1/1:2,25:27:72.20:1073,72,0	1/1:1,15:16:42.14:634,42,0	1/1:1,7:8:21.07:320,21,0	1/1:0,20:20:60.20:918,60,0	1/1:2,31:32:84.28:1265,84,0	1/1:2,22:24:69.23:1056,69,0	1/1:0,14:14:32.90:504,33,0	1/1:1,29:30:78.26:1191,78,0	1/1:0,19:20:54.18:827,54,0	1/1:2,21:22:63.21:959,63,0	1/1:1,24:25:62.42:924,62,0	1/1:1,4:5:9.03:131,9,0
chr10	61198935	.	GC	G	4446.91	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=10.771;DP=574;FS=0.000;HRun=1;HaplotypeScore=192.1787;InbreedingCoeff=0.9647;MQ=55.08;MQ0=2;MQRankSum=-0.790;QD=8.77;ReadPosRankSum=7.135;VQSLOD=2.0304;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:32,0:32:70.10:268,70,0	1/1:12,1:13:31.40:123,31,0	0/0:15,0:12:36.12:0,36,557	0/0:22,0:22:60.05:0,60,880	1/1:27,2:28:44.14:169,44,0	1/1:12,0:12:28.56:109,29,0	1/1:23,0:23:57.12:219,57,0	0/0:30,0:30:84.28:0,84,1314	1/1:23,0:23:54.52:208,55,0	1/1:26,0:25:60.12:243,60,0	1/1:13,0:13:28.56:109,29,0	1/1:20,2:21:49.50:196,49,0	1/1:18,0:18:41.54:159,42,0	1/1:14,1:15:31.36:122,31,0	1/1:20,0:20:49.33:188,49,0	1/1:21,0:21:54.52:208,55,0	1/1:25,1:26:62.68:248,63,0	1/1:15,0:15:35:132,35,0	1/1:8,0:8:18.32:72,18,0	1/1:20,0:20:51.93:198,52,0	1/1:31,1:31:68.27:265,68,0	1/1:23,0:23:59.72:228,60,0	1/1:14,0:14:28.43:108,28,0	1/1:29,1:30:67.74:261,68,0	1/1:19,1:20:46.73:179,47,0	1/1:21,1:21:54.52:209,55,0	1/1:25,0:25:52.81:201,53,0	1/1:5,0:5:6.75:23,7,0
chr10	61199415	.	T	TC	15221.71	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=8.284;DP=602;FS=4.561;HRun=0;HaplotypeScore=106.1659;InbreedingCoeff=0.9811;MQ=61.19;MQ0=2;MQRankSum=-7.615;QD=29.39;ReadPosRankSum=4.954;VQSLOD=4.9331;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,32:33:63.06:934,63,0	1/1:0,15:15:24.06:383,24,0	0/0:25,0:20:60.17:0,60,816	0/0:29,0:23:66:0,66,835	1/1:1,29:30:51.17:813,51,0	1/1:0,18:18:33.11:516,33,0	1/1:0,22:22:18.06:286,18,0	0/0:30,0:30:78.72:0,79,1076	1/1:1,20:21:27.09:411,27,0	1/1:2,21:22:57.19:897,57,0	1/1:0,21:21:39.13:612,39,0	1/1:0,17:17:32.97:526,33,0	1/1:1,22:23:44.75:651,45,0	1/1:1,17:18:42.02:611,42,0	1/1:3,21:24:48.03:706,48,0	1/1:0,14:14:21.07:335,21,0	1/1:1,23:24:51.11:783,51,0	1/1:1,13:14:27.09:431,27,0	1/1:0,18:16:48.16:766,48,0	1/1:1,31:30:45.07:687,45,0	1/1:1,22:20:45.15:718,45,0	1/1:0,25:24:57.19:909,57,0	1/1:1,22:23:39.13:622,39,0	1/1:0,20:18:24.08:383,24,0	1/1:0,10:9:21.07:335,21,0	1/1:0,21:21:57.17:884,57,0	1/1:1,24:25:54.10:831,54,0	1/1:0,4:4:12.04:191,12,0
chr10	61199859	.	T	TG	23769.24	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=8.985;DP=709;FS=7.009;HRun=0;HaplotypeScore=211.8280;InbreedingCoeff=0.9989;MQ=60.83;MQ0=0;MQRankSum=-2.259;QD=36.85;ReadPosRankSum=5.302;VQSLOD=3.4549;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,40:37:81.27:1254,81,0	1/1:0,13:13:30.10:468,30,0	0/0:30,0:20:41.06:0,41,638	0/0:34,0:32:70.12:0,70,970	1/1:1,30:30:84.28:1295,84,0	1/1:0,22:22:54.18:841,54,0	1/1:0,19:18:45.15:700,45,0	1/1:0,28:23:69.16:993,69,0	1/1:0,28:26:69.23:1064,69,0	1/1:2,31:31:80.72:1212,81,0	1/1:1,16:16:33.11:514,33,0	1/1:0,21:21:51.17:781,51,0	1/1:1,22:23:51.17:795,51,0	1/1:1,28:29:72.25:1123,72,0	1/1:0,38:38:96.33:1500,96,0	1/1:1,22:23:51.17:796,51,0	1/1:0,21:21:60.20:927,60,0	1/1:0,18:18:42.14:655,42,0	1/1:0,12:12:36.07:514,36,0	1/1:0,21:19:39.13:607,39,0	1/1:0,23:22:66.22:1031,66,0	1/1:1,22:22:51.17:788,51,0	1/1:0,25:25:54.18:838,54,0	1/1:0,34:33:72.24:1124,72,0	1/1:0,29:28:75.26:1170,75,0	1/1:0,27:27:72.20:1097,72,0	1/1:0,34:33:81.28:1263,81,0	1/1:1,10:11:27.09:421,27,0
chr10	61200266	.	T	TG	15077.18	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=4.070;DP=512;FS=37.947;HRun=1;HaplotypeScore=101.2505;InbreedingCoeff=0.9942;MQ=57.53;MQ0=3;MQRankSum=-0.227;QD=34.19;ReadPosRankSum=7.843;VQSLOD=2.1325;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,29:33:78.03:1091,78,0	1/1:2,6:8:17.92:267,18,0	0/0:18,0:15:45.13:0,45,591	0/0:18,0:17:44.29:0,44,617	1/1:1,16:17:45.06:595,45,0	1/1:0,22:22:51.17:758,51,0	1/1:0,10:10:24.08:356,24,0	0/0:35,0:34:80.39:0,80,504	1/1:1,17:18:42.11:625,42,0	1/1:0,16:16:48.14:674,48,0	1/1:0,11:11:27.09:400,27,0	1/1:0,16:15:33.09:489,33,0	1/1:2,13:14:29.93:445,30,0	1/1:0,15:15:33.11:491,33,0	1/1:0,21:21:60.20:893,60,0	1/1:1,18:19:47.99:715,48,0	1/1:1,11:12:30.01:442,30,0	1/1:1,12:13:27:375,27,0	1/1:1,14:15:39.02:560,39,0	1/1:2,25:24:57.01:806,57,0	1/1:2,14:15:35.95:476,36,0	1/1:0,14:12:27.09:399,27,0	1/1:2,22:24:48.05:693,48,0	1/1:0,18:18:42.12:626,42,0	1/1:2,19:20:51.17:750,51,0	1/1:1,14:13:39.12:563,39,0	1/1:1,32:32:81.23:1185,81,0	1/1:0,11:11:27.09:403,27,0
chr10	61200272	.	TG	T	6131.44	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=6.081;DP=497;FS=12.292;HRun=1;HaplotypeScore=132.9492;InbreedingCoeff=0.9967;MQ=56.44;MQ0=2;MQRankSum=0.184;QD=13.84;ReadPosRankSum=3.921;VQSLOD=3.1903;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:31,2:33:88.58:528,89,0	1/1:10,0:10:27.79:160,28,0	0/0:18,0:13:39.12:0,39,554	0/0:15,0:14:39.12:0,39,548	1/1:16,0:16:32.90:162,33,0	1/1:21,0:21:47.13:229,47,0	1/1:12,0:11:27.23:139,27,0	0/0:20,0:21:58.87:0,59,552	1/1:18,1:19:50.72:272,51,0	1/1:17,0:17:48.81:313,49,0	1/1:9,0:9:21.44:91,21,0	1/1:16,0:15:39.36:208,39,0	1/1:16,1:16:45.04:267,45,0	1/1:14,0:14:35.98:190,36,0	1/1:22,0:22:58.79:299,59,0	1/1:19,0:19:50.70:278,51,0	1/1:13,0:13:33.17:168,33,0	1/1:10,1:11:28.90:182,29,0	1/1:17,0:17:49.86:333,50,0	1/1:24,1:21:55.65:311,56,0	1/1:16,1:16:37.18:243,37,0	1/1:16,0:14:31.14:180,31,0	1/1:21,2:22:51.69:257,52,0	1/1:17,0:17:47.89:254,48,0	1/1:17,1:17:43.42:204,43,0	1/1:15,0:13:38.97:226,39,0	1/1:34,1:34:88.88:513,89,0	1/1:11,0:11:25.18:123,25,0
chr10	61200571	.	AC	A	12929.69	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=12.149;DP=429;FS=7.308;HRun=1;HaplotypeScore=130.9402;InbreedingCoeff=0.9575;MQ=65.78;MQ0=0;MQRankSum=-7.438;QD=38.25;ReadPosRankSum=8.150;VQSLOD=3.1416;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,21:21:54.18:754,54,0	1/1:0,4:4:12.04:168,12,0	0/0:25,0:24:72.23:0,72,1120	0/0:27,0:27:77.81:0,78,1136	1/1:0,20:20:45.12:607,45,0	1/1:0,15:15:45.15:629,45,0	1/1:0,6:6:15.05:210,15,0	0/0:39,0:39:99:0,117,1867	1/1:0,16:16:48.13:649,48,0	1/1:0,9:9:27.09:377,27,0	1/1:0,5:5:12.04:167,12,0	1/1:0,17:17:45.11:607,45,0	1/1:0,15:15:45.15:621,45,0	1/1:0,12:12:33.11:461,33,0	1/1:0,20:20:60.12:795,60,0	1/1:0,21:21:60.12:795,60,0	1/1:0,9:9:24.08:336,24,0	1/1:0,7:7:18.06:252,18,0	1/1:0,4:4:11.98:127,12,0	1/1:0,20:20:51.17:713,51,0	1/1:0,30:30:87.29:1217,87,0	1/1:0,8:8:24.04:313,24,0	1/1:0,11:11:33.11:461,33,0	1/1:0,13:13:35.95:475,36,0	1/1:0,12:12:36.08:481,36,0	1/1:0,17:17:48.15:667,48,0	1/1:0,16:16:45.15:629,45,0	1/1:0,10:10:30.10:419,30,0
chr10	61204424	.	A	ATT	17005.05	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=10.553;DP=419;FS=1.702;HRun=3;HaplotypeScore=102.4846;InbreedingCoeff=0.9092;MQ=66.92;MQ0=0;MQRankSum=-6.809;QD=48.17;ReadPosRankSum=4.682;VQSLOD=4.1212;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,18:23:57.10:960,57,0	1/1:0,5:5:15.05:280,15,0	0/0:12,0:12:36.11:0,36,487	0/0:10,0:10:24.08:0,24,348	1/1:0,20:20:57.20:1063,57,0	1/1:4,17:21:60.12:1043,60,0	1/1:2,4:6:18.06:328,18,0	0/0:44,0:44:99:0,129,1844	1/1:2,3:5:9.03:168,9,0	1/1:7,16:23:57.11:957,57,0	1/1:2,18:20:60.21:1117,60,0	1/1:1,8:9:27.08:474,27,0	1/1:2,11:13:36.11:640,36,0	1/1:3,8:11:33.06:550,33,0	1/1:4,20:24:63.13:1101,63,0	1/1:1,8:9:27.09:504,27,0	1/1:2,3:5:12.04:208,12,0	1/1:1,5:6:12.04:213,12,0	1/1:2,8:10:24.08:449,24,0	1/1:5,23:28:75.21:1337,75,0	1/1:1,4:5:6.02:112,6,0	1/1:3,11:14:39.12:669,39,0	1/1:5,14:19:54.12:910,54,0	1/1:3,3:6:15.04:246,15,0	1/1:0,20:20:60.16:1083,60,0	1/1:0,10:10:30.09:532,30,0	1/1:10,23:33:93.28:1614,93,0	1/1:1,7:8:24.08:446,24,0
chr10	61204460	.	GTATT	G	13770.59	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=6.931;DP=347;FS=3.313;HRun=0;HaplotypeScore=103.5832;InbreedingCoeff=0.7901;MQ=55.32;MQ0=0;MQRankSum=-6.245;QD=45.90;ReadPosRankSum=5.747;VQSLOD=5.4857;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,16:19:48.11:802,48,0	1/1:0,3:3:6.02:109,6,0	0/0:10,0:9:21.06:0,21,439	0/0:8,0:9:18.05:0,18,370	1/1:1,20:21:54.19:989,54,0	1/1:2,21:23:57.20:1038,57,0	1/1:1,4:5:15.05:264,15,0	0/0:28,0:28:66.20:0,66,1567	1/1:0,3:3:6.02:93,6,0	1/1:2,19:21:60.19:1047,60,0	1/1:1,16:17:48.16:879,48,0	1/1:1,7:8:21.07:386,21,0	1/1:2,9:11:27.09:469,27,0	1/1:0,8:8:24.08:441,24,0	1/1:1,8:9:24.08:436,24,0	1/1:2,7:9:18.06:331,18,0	1/1:1,4:5:9.03:163,9,0	1/1:2,1:3:3.01:55,3,0	1/1:2,9:11:30.08:478,30,0	1/1:2,26:28:75.23:1306,75,0	1/1:0,1:1:3.01:38,3,0	1/1:1,8:9:24.08:441,24,0	1/1:2,17:19:48.16:864,48,0	1/1:1,5:6:15.05:272,15,0	1/1:2,20:22:60.21:1094,60,0	1/1:3,5:8:18.06:330,18,0	1/1:1,22:24:66.22:1176,66,0	1/1:4,3:7:18.03:271,18,0
chr10	61204994	.	TGA	T	20099.28	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=5.459;DP=562;FS=6.424;HRun=0;HaplotypeScore=111.7789;InbreedingCoeff=0.9951;MQ=82.12;MQ0=4;MQRankSum=-7.876;QD=41.10;ReadPosRankSum=6.820;VQSLOD=6.1475;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,26:26:75.25:1147,75,0	1/1:0,9:9:27.09:414,27,0	0/0:17,0:18:46.92:0,47,727	0/0:19,0:18:22.88:0,23,633	1/1:0,32:32:90.22:1324,90,0	1/1:1,27:28:81.28:1240,81,0	1/1:0,18:18:51.17:781,51,0	0/0:36,0:36:99:0,105,1978	1/1:0,22:22:54.18:827,54,0	1/1:1,26:26:78.24:1171,78,0	1/1:0,23:24:72.24:1100,72,0	1/1:0,17:17:51.17:781,51,0	1/1:0,12:12:30.10:459,30,0	1/1:0,17:17:45.15:689,45,0	1/1:0,9:9:27.09:413,27,0	1/1:0,15:15:39.13:597,39,0	1/1:0,19:19:42.10:617,42,0	1/1:0,7:7:21.07:322,21,0	1/1:1,21:21:60.16:871,60,0	1/1:0,28:28:78.26:1193,78,0	1/1:2,21:23:38.87:597,39,0	1/1:0,24:24:69.23:1056,69,0	1/1:0,23:22:63.21:964,63,0	1/1:0,17:17:45.15:689,45,0	1/1:0,14:14:36.12:551,36,0	1/1:1,19:19:54.18:827,54,0	1/1:0,28:28:75.25:1148,75,0	1/1:0,7:7:21.07:321,21,0
chr10	61205960	.	T	TC	858.69	PASS	AB=0.500;AC=15;AF=0.682;AN=22;BaseQRankSum=-1.167;DP=132;FS=19.713;HRun=0;HaplotypeScore=36.5707;InbreedingCoeff=0.6001;MQ=52.42;MQ0=5;MQRankSum=-3.767;QD=20.44;ReadPosRankSum=3.024;VQSLOD=3.2860;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:4,0:2:1.82:0,2,5	0/0:4,0:4:6.01:0,6,59	./.	./.	./.	0/0:5,0:4:12.02:0,12,119	./.	1/1:1,5:6:18.05:266,18,0	./.	./.	./.	./.	./.	0/1:0,6:6:0:0,0,0	1/1:1,6:7:6.02:95,6,0	1/1:0,3:3:9.03:143,9,0	1/1:3,4:3:9.03:143,9,0	./.	./.	./.	./.	./.	./.	1/1:0,3:3:9.03:132,9,0	1/1:0,7:7:9.03:143,9,0	1/1:1,2:2:3.01:37,3,0
chr10	61206393	.	GT	G	13134.37	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=8.095;DP=624;FS=3.465;HRun=8;HaplotypeScore=125.9701;InbreedingCoeff=0.9940;MQ=58.00;MQ0=4;MQRankSum=1.521;QD=23.50;ReadPosRankSum=5.722;VQSLOD=3.5591;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,20:24:45.02:424,45,0	1/1:0,6:6:15.02:145,15,0	0/0:21,0:14:33.10:0,33,393	0/0:13,0:13:36.08:0,36,401	1/1:5,23:28:63.01:596,63,0	1/1:2,24:25:63.10:608,63,0	1/1:3,14:14:36.02:339,36,0	0/0:31,0:31:75.22:0,75,895	1/1:1,23:24:66.10:637,66,0	1/1:2,22:24:63.10:608,63,0	1/1:5,32:36:87.03:821,87,0	1/1:0,15:15:33.05:319,33,0	1/1:2,21:22:60.10:579,60,0	1/1:1,15:16:42.07:406,42,0	1/1:1,20:20:51.02:481,51,0	1/1:0,15:15:42.06:405,42,0	1/1:3,29:30:72.59:696,73,0	1/1:1,19:18:45.07:435,45,0	1/1:4,15:16:39.06:377,39,0	1/1:3,25:28:75.11:724,75,0	1/1:4,18:22:54.08:521,54,0	1/1:1,30:31:84.13:811,84,0	1/1:4,22:26:60.04:570,60,0	1/1:2,19:21:51.08:492,51,0	1/1:1,25:26:72.02:676,72,0	1/1:1,15:16:45.02:421,45,0	1/1:3,21:24:60.10:579,60,0	1/1:1,17:18:48.08:464,48,0
chr10	61207077	.	ACT	A	3066.22	PASS	AB=0.888;AC=48;AF=0.857;AN=56;BaseQRankSum=3.475;DP=472;FS=7.881;HRun=0;HaplotypeScore=141.4673;InbreedingCoeff=0.3689;MQ=68.60;MQ0=8;MQRankSum=-0.434;QD=8.15;ReadPosRankSum=5.100;VQSLOD=2.2503;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:25,1:25:31.18:245,31,0	1/1:8,0:8:12.85:97,13,0	0/0:43,0:28:70.34:0,70,771	0/0:53,0:32:66.06:0,66,742	1/1:15,0:15:14.66:138,15,0	1/1:18,0:18:15.32:109,15,0	1/1:10,0:9:0.93:36,1,0	1/1:3,0:18:38.56:295,39,0	0/1:6,12:18:14.32:14,0,17	1/1:17,0:17:19.82:217,20,0	0/1:15,0:14:0.38:61,0,0	1/1:12,1:14:8.40:108,8,0	1/1:8,0:8:13.20:133,13,0	0/1:12,0:12:10.55:73,0,11	0/1:19,0:20:0.89:99,0,1	1/1:12,0:12:8.97:71,9,0	1/1:20,0:20:6.62:60,7,0	1/1:5,0:5:14.90:108,15,0	1/1:4,0:4:6.63:52,7,0	1/1:18,0:17:14.90:111,15,0	1/1:13,0:12:11.95:93,12,0	1/1:19,0:16:20.94:165,21,0	1/1:15,1:12:20.93:166,21,0	1/1:17,2:19:11.18:89,11,0	1/1:16,0:16:13.79:140,14,0	1/1:17,0:17:43.75:355,44,0	1/1:12,0:12:13.47:133,13,0	1/1:6,0:6:5.91:38,6,0
chr10	61207082	.	C	CA	1024.53	PASS	AB=0.924;AC=37;AF=0.661;AN=56;BaseQRankSum=7.220;DP=462;FS=37.085;HRun=0;HaplotypeScore=148.4532;InbreedingCoeff=0.3250;MQ=63.23;MQ0=10;MQRankSum=0.389;QD=3.16;ReadPosRankSum=3.536;VQSLOD=1.1397;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:26,3:28:21.97:78,22,0	1/1:8,0:8:12.70:59,13,0	0/0:42,0:27:78.26:0,78,1068	0/0:49,0:28:66.22:0,66,911	1/1:11,2:12:17.99:99,18,0	1/1:19,0:19:0.49:70,0,0	0/1:9,0:8:1.07:19,0,1	0/0:18,0:18:39.96:0,40,232	0/1:14,4:18:17.83:18,0,18	1/1:15,1:16:3.86:123,4,0	1/1:13,1:13:9.20:32,9,0	0/1:13,0:13:2.19:31,0,2	0/1:8,1:9:4.10:34,0,4	1/1:10,2:12:5.63:29,6,0	1/1:15,3:18:19.30:96,19,0	1/1:10,0:10:7.21:25,7,0	0/1:21,0:20:11.70:12,0,36	0/0:5,0:5:1.99:0,2,16	0/1:7,0:7:6.60:19,0,7	1/1:21,0:20:9.44:61,9,0	1/1:12,0:11:6.85:21,7,0	1/1:18,0:14:16.39:55,16,0	1/1:14,0:10:6.73:36,7,0	0/0:21,0:21:3.04:0,3,24	1/1:13,1:14:20.51:80,21,0	1/1:17,0:17:31.46:171,31,0	0/1:8,4:12:15.97:27,0,16	0/0:3,0:3:4.22:0,4,24
chr10	61207083	.	T	TA	346.17	PASS	AB=0.934;AC=29;AF=0.518;AN=56;BaseQRankSum=7.666;DP=509;FS=0.000;HRun=0;HaplotypeScore=175.3916;InbreedingCoeff=0.2094;MQ=58.67;MQ0=10;MQRankSum=0.522;QD=1.10;ReadPosRankSum=0.187;VQSLOD=2.1575;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:30,3:33:14.46:71,14,0	1/1:9,0:8:5.65:33,6,0	0/0:41,0:26:75.20:0,75,964	0/0:48,0:27:63.20:0,63,846	1/1:10,2:11:5.04:15,5,0	0/1:20,0:20:3.16:29,0,3	0/1:10,0:9:8.29:17,0,8	0/0:27,0:27:28.72:0,29,200	0/1:20,4:24:17.55:18,0,23	0/1:18,1:19:12.95:84,0,13	1/1:15,1:14:4.37:13,4,0	0/0:13,0:13:0.83:0,1,18	0/1:11,1:12:6.08:15,0,6	0/1:13,2:15:5.08:5,0,11	1/1:17,3:20:5.91:23,6,0	1/1:12,0:12:4.74:25,5,0	0/0:22,0:21:13.31:0,13,58	0/0:6,0:5:10.31:0,10,36	0/1:10,0:10:13.52:35,0,14	0/0:21,0:20:0.96:0,1,8	0/0:14,0:13:0.99:0,1,4	1/1:18,0:14:3.86:9,4,0	1/1:14,0:10:1.31:4,1,0	0/1:23,0:23:9.18:9,0,12	1/1:13,1:14:10.98:47,11,0	1/1:18,0:18:5.09:56,5,0	0/1:11,4:15:2.06:2,0,21	0/0:3,0:3:5.40:0,5,25
chr10	61207119	.	A	ACG	1818.73	PASS	AB=0.996;AC=27;AF=0.519;AN=52;BaseQRankSum=5.182;DP=480;FS=21.938;HRun=0;HaplotypeScore=145.2818;InbreedingCoeff=0.0925;MQ=54.49;MQ0=15;MQRankSum=-2.601;QD=6.14;ReadPosRankSum=4.900;VQSLOD=1.1404;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:38,2:39:42.09:306,0,42	1/1:6,0:5:8.21:68,8,0	0/0:27,0:13:32.09:0,32,312	0/0:31,0:18:44.32:0,44,470	1/1:12,2:13:12:108,12,0	0/0:19,0:19:18.61:0,19,100	0/0:16,0:15:16.63:0,17,121	0/0:32,0:30:82.06:0,82,654	1/1:17,4:21:13.70:120,14,0	0/1:17,0:17:43.26:114,0,43	1/1:19,0:17:5.74:36,6,0	1/1:13,0:13:5.35:35,5,0	1/1:9,0:9:6.82:105,7,0	0/1:15,0:15:1.38:62,0,1	0/1:19,0:19:49.30:101,0,49	1/1:12,0:12:17.70:125,18,0	0/1:22,0:21:21.73:36,0,22	0/1:9,0:7:8.39:50,0,8	0/1:20,0:20:29.24:173,0,29	./.	0/1:17,0:16:27.07:55,0,27	./.	0/0:15,0:11:6.34:0,6,36	0/0:20,0:20:3.11:0,3,18	0/1:8,0:8:10.92:79,0,11	0/1:16,0:16:69.09:162,0,69	1/1:15,1:16:15.52:241,16,0	0/1:3,0:3:15.02:15,0,29
chr10	61207123	.	A	ACGCACG	5941.09	PASS	AB=0.958;AC=45;AF=0.833;AN=54;BaseQRankSum=4.617;DP=482;FS=6.473;HRun=0;HaplotypeScore=166.9392;InbreedingCoeff=0.5055;MQ=60.43;MQ0=14;MQRankSum=-5.051;QD=15.80;ReadPosRankSum=2.764;VQSLOD=3.9632;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:35,0:34:35.20:694,35,0	1/1:7,0:6:9.01:140,9,0	0/0:28,0:16:44.11:0,44,645	0/0:32,0:20:37.80:0,38,933	1/1:17,0:16:15.03:233,15,0	1/1:20,0:20:6.15:199,6,0	0/1:15,0:14:21.35:30,0,21	0/0:36,0:34:56.11:0,56,1051	1/1:19,0:19:17.77:287,18,0	1/1:15,1:16:14.81:380,15,0	1/1:16,1:15:3.01:49,3,0	1/1:5,6:14:8.72:68,9,0	1/1:8,1:9:14.69:272,15,0	0/1:12,2:14:8.09:154,0,8	1/1:15,3:18:17.62:375,18,0	1/1:13,0:13:26.68:306,27,0	1/1:6,13:25:3.49:212,3,0	1/1:6,0:4:11.93:139,12,0	1/1:21,0:21:59.45:528,59,0	0/1:16,0:15:0:0,0,0	1/1:16,0:15:15.85:186,16,0	./.	1/1:15,0:11:2.49:69,2,0	1/1:19,0:19:3.19:84,3,0	1/1:6,1:7:12.04:218,12,0	1/1:5,9:17:35.75:588,36,0	1/1:13,3:16:36.96:610,37,0	1/1:3,0:3:9.03:120,9,0
chr10	61207124	.	CAG	C	2151.86	PASS	AB=1.000;AC=41;AF=0.788;AN=52;BaseQRankSum=3.805;DP=474;FS=3.507;HRun=0;HaplotypeScore=133.7996;InbreedingCoeff=0.3166;MQ=63.07;MQ0=14;MQRankSum=-0.648;QD=6.15;ReadPosRankSum=3.300;VQSLOD=2.9625;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:35,0:34:30.74:215,31,0	1/1:7,0:6:11.94:91,12,0	0/0:29,0:17:37.19:0,37,392	0/0:33,0:21:39.34:0,39,444	1/1:17,1:17:7.11:91,7,0	1/1:20,0:20:18.54:146,19,0	1/1:15,0:14:18.68:193,19,0	0/0:35,0:33:81.84:0,82,735	0/1:18,0:18:16.97:29,0,17	1/1:14,0:14:7.02:83,7,0	0/1:16,0:14:6.37:19,0,6	0/1:11,0:11:4.32:12,0,4	1/1:9,0:9:6.03:69,6,0	0/1:15,0:15:18.08:35,0,18	0/1:17,0:17:12.32:36,0,12	1/1:14,0:14:20.85:158,21,0	1/1:24,0:23:1.22:20,1,0	1/1:6,0:4:11.88:83,12,0	1/1:5,16:21:46.63:338,47,0	./.	1/1:15,1:15:18.32:135,18,0	./.	1/1:15,0:11:8.89:60,9,0	1/1:19,0:19:5.06:44,5,0	1/1:7,0:7:3.98:57,4,0	1/1:14,0:14:13.76:144,14,0	1/1:18,0:18:25.21:228,25,0	1/1:1,0:1:3:25,3,0
chr10	61207642	.	C	CT	15359.08	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-0.470;DP=447;FS=8.453;HRun=1;HaplotypeScore=71.0403;InbreedingCoeff=0.9785;MQ=73.00;MQ0=0;MQRankSum=-8.216;QD=39.38;ReadPosRankSum=6.110;VQSLOD=4.8587;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,11:12:28.91:408,29,0	1/1:0,11:11:30.10:448,30,0	0/0:16,0:16:42.63:0,43,471	0/0:13,0:12:32.46:0,32,374	1/1:0,29:29:75.25:1114,75,0	1/1:0,14:14:33.11:493,33,0	1/1:1,11:12:36.08:508,36,0	0/0:28,0:28:84.26:0,84,1078	1/1:2,8:10:24.04:334,24,0	1/1:0,19:19:57.19:851,57,0	1/1:2,18:20:57.19:822,57,0	1/1:0,13:13:36.12:537,36,0	1/1:1,14:15:39.09:558,39,0	1/1:2,12:14:39.09:548,39,0	1/1:0,21:21:57.19:847,57,0	1/1:1,10:11:27.09:404,27,0	1/1:0,8:8:21.07:314,21,0	1/1:0,6:6:15.05:224,15,0	1/1:0,14:14:42.13:589,42,0	1/1:2,27:29:78.18:1110,78,0	1/1:0,9:9:27.09:397,27,0	1/1:0,20:20:54.18:793,54,0	1/1:2,26:28:69.23:1025,69,0	1/1:0,5:5:12.04:179,12,0	1/1:1,12:13:33.07:468,33,0	1/1:1,25:26:78.21:1122,78,0	1/1:0,23:24:66.22:972,66,0	1/1:0,7:7:21.06:295,21,0
chr10	61207917	.	GT	G	1095.50	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-0.381;DP=445;FS=2.266;HRun=5;HaplotypeScore=55.2986;InbreedingCoeff=0.9290;MQ=69.41;MQ0=0;MQRankSum=3.113;QD=28.83;ReadPosRankSum=-4.830;VQSLOD=1.4660;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:48.16:0,48,653	0/0:12,0:12:33.11:0,33,448	0/0:12,0:12:27.08:0,27,351	0/0:7,0:7:17.14:0,17,193	0/0:24,0:24:63.21:0,63,855	0/0:15,0:15:45.15:0,45,616	0/0:5,0:5:15.05:0,15,205	1/1:2,36:38:99:1190,105,0	0/0:12,0:12:36.11:0,36,476	0/0:18,0:18:48.15:0,48,639	0/0:25,0:25:72.24:0,72,981	0/0:11,0:11:33.11:0,33,451	0/0:19,0:19:57.19:0,57,777	0/0:14,0:14:39.13:0,39,528	0/0:15,0:15:45.14:0,45,600	0/0:12,0:12:36.12:0,36,492	0/0:20,0:20:57.19:0,57,779	0/0:13,0:13:33.11:0,33,450	0/0:18,0:18:51.17:0,51,698	0/0:31,0:31:81.27:0,81,1107	0/0:9,0:9:24.08:0,24,328	0/0:15,0:15:42.14:0,42,574	0/0:17,0:17:51.16:0,51,683	0/0:6,0:6:12.04:0,12,164	0/0:13,0:13:39.13:0,39,530	0/0:18,0:18:51.15:0,51,669	0/0:24,0:24:63.16:0,63,803	0/0:5,0:5:15.05:0,15,205
chr10	61208147	.	TGA	T	5776.22	PASS	AB=0.708;AC=39;AF=0.696;AN=56;BaseQRankSum=-0.339;DP=525;FS=15.603;HRun=0;HaplotypeScore=119.7898;InbreedingCoeff=0.6521;MQ=58.41;MQ0=21;MQRankSum=0.616;QD=16.09;ReadPosRankSum=-0.177;VQSLOD=3.9540;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,16:16:6.02:92,6,0	1/1:1,8:9:5.95:63,6,0	0/0:38,0:13:29.20:0,29,392	0/0:49,0:22:36.02:0,36,563	1/1:1,23:24:51.17:699,51,0	0/0:20,0:20:19.62:0,20,264	0/0:12,0:12:16.48:0,16,118	0/1:28,0:28:7.49:7,0,393	1/1:1,12:13:5.89:83,6,0	1/1:14,5:19:51.02:650,51,0	1/1:0,15:15:11.97:156,12,0	1/1:1,11:12:2.66:45,3,0	1/1:0,14:14:5.81:90,6,0	1/1:4,18:20:27.02:368,27,0	1/1:1,15:16:12.01:176,12,0	0/1:3,11:14:4.34:154,0,4	1/1:18,3:21:36.02:454,36,0	0/1:2,7:9:2.35:83,0,2	1/1:2,15:17:45.07:596,45,0	1/1:0,24:24:39.13:512,39,0	1/1:1,13:13:3.01:46,3,0	0/0:22,0:22:28.52:0,29,337	0/0:15,0:15:26.87:0,27,208	0/0:9,0:9:11.82:0,12,80	1/1:1,18:19:15.05:229,15,0	1/1:15,8:22:62.89:864,63,0	1/1:4,22:26:27:363,27,0	1/1:0,4:4:3.01:46,3,0
chr10	61208152	.	GGAGA	G	577.20	PASS	AB=0.914;AC=20;AF=0.455;AN=44;BaseQRankSum=2.051;DP=523;FS=26.127;HRun=0;HaplotypeScore=145.8825;InbreedingCoeff=0.4393;MQ=55.52;MQ0=22;MQRankSum=-3.836;QD=2.67;ReadPosRankSum=0.172;VQSLOD=0.8033;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:15,0:17:0:0,0,0	0/0:9,0:9:0.47:0,0,1	./.	0/0:46,0:19:0:0,0,0	1/1:17,0:24:9.01:83,9,0	0/0:21,0:20:0.36:0,0,0	0/0:11,0:12:3.01:0,3,37	./.	0/0:13,0:14:3.35:0,3,16	1/1:14,2:16:6.02:90,6,0	./.	0/1:13,1:14:3.09:40,0,3	1/1:15,0:15:0.26:1,0,0	1/1:18,2:19:9.02:125,9,0	0/0:15,0:15:5.87:0,6,61	0/0:13,0:13:6.49:0,6,115	1/1:16,2:19:14.39:125,14,0	./.	1/1:15,0:16:3.01:30,3,0	1/1:25,1:26:2.97:20,3,0	./.	0/0:23,0:23:5.79:0,6,93	0/0:19,0:19:3.01:0,3,64	0/0:13,0:12:3.01:0,3,52	0/0:17,1:18:0:0,0,0	1/1:22,0:23:6.01:56,6,0	1/1:21,1:24:5.08:132,5,0	./.
chr10	61208272	.	CTG	C	18136.57	PASS	AB=0.600;AC=49;AF=0.875;AN=56;BaseQRankSum=9.100;DP=585;FS=2.091;HRun=0;HaplotypeScore=121.2736;InbreedingCoeff=0.8367;MQ=75.20;MQ0=7;MQRankSum=-4.660;QD=36.79;ReadPosRankSum=8.882;VQSLOD=6.0100;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:0,27:27:69.23:965,69,0	1/1:0,6:5:15.05:210,15,0	0/0:24,0:23:63.18:0,63,1065	0/0:25,0:22:51.17:0,51,841	1/1:0,16:16:48.16:671,48,0	1/1:0,24:24:72.24:1008,72,0	1/1:2,12:14:30.10:420,30,0	0/0:43,0:43:99:0,111,1990	1/1:2,28:30:84.28:1176,84,0	1/1:1,21:22:63.21:880,63,0	1/1:0,18:18:54.18:756,54,0	1/1:1,25:26:75.25:1050,75,0	1/1:1,17:18:54.18:755,54,0	1/1:2,24:25:66.22:923,66,0	1/1:0,29:28:78.26:1092,78,0	1/1:1,23:24:66.22:924,66,0	1/1:0,12:11:21.07:294,21,0	1/1:2,6:8:18.06:252,18,0	0/1:7,14:19:11.85:484,0,12	1/1:1,20:21:60.20:840,60,0	1/1:1,22:23:57.19:797,57,0	1/1:0,8:8:24.08:336,24,0	1/1:0,12:12:33.11:462,33,0	1/1:1,15:15:27.09:372,27,0	1/1:2,17:19:45.15:630,45,0	1/1:2,33:35:99:1368,99,0	1/1:2,26:28:75.08:1050,75,0	1/1:0,10:10:30.10:420,30,0
chr10	61210506	.	T	TCTG	8501.32	PASS	AC=46;AF=0.885;AN=52;BaseQRankSum=4.049;DP=255;FS=173.793;HRun=0;HaplotypeScore=72.2643;InbreedingCoeff=0.7572;MQ=58.16;MQ0=15;MQRankSum=-7.544;QD=45.22;ReadPosRankSum=3.230;VQSLOD=0.9434;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,4:5:12.04:253,12,0	./.	0/0:20,0:12:27.07:0,27,404	0/0:24,0:16:33.09:0,33,495	1/1:4,13:16:33.09:681,33,0	1/1:0,6:4:12.04:261,12,0	1/1:0,3:2:6.02:130,6,0	0/0:23,0:22:48.16:0,48,761	1/1:1,3:3:9.03:195,9,0	1/1:4,14:18:45.15:980,45,0	1/1:3,6:7:15.05:322,15,0	1/1:1,6:6:18.06:392,18,0	1/1:2,5:5:15.05:326,15,0	1/1:2,5:7:12.04:261,12,0	1/1:0,6:6:18.06:391,18,0	1/1:4,8:11:24.08:522,24,0	1/1:0,2:2:6.02:131,6,0	1/1:0,3:3:9.03:196,9,0	1/1:1,2:3:3.01:65,3,0	1/1:0,12:10:30.10:638,30,0	./.	1/1:2,8:9:21.07:434,21,0	1/1:4,10:11:21.07:448,21,0	1/1:0,5:3:9.03:196,9,0	1/1:0,10:8:24.08:511,24,0	1/1:4,9:11:24.08:515,24,0	1/1:1,9:10:24.08:522,24,0	1/1:0,2:2:6.02:131,6,0
chr10	61211889	.	G	GATA	17440.25	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-3.991;DP=385;FS=0.000;HRun=0;HaplotypeScore=50.1320;InbreedingCoeff=0.8965;MQ=60.14;MQ0=1;MQRankSum=-1.528;QD=46.51;ReadPosRankSum=2.793;VQSLOD=6.2843;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,11:11:21.07:484,21,0	1/1:0,8:8:21.07:484,21,0	0/0:5,0:5:15.05:0,15,254	0/0:5,0:5:12.04:0,12,176	1/1:1,20:20:39.13:898,39,0	1/1:3,14:18:36.12:829,36,0	1/1:0,5:5:9.03:207,9,0	1/1:1,32:15:39.09:662,39,0	1/1:0,20:20:45.15:1037,45,0	1/1:1,16:16:39.12:820,39,0	1/1:0,24:25:63.09:1304,63,0	1/1:0,15:15:36.12:830,36,0	1/1:3,9:13:24.08:553,24,0	1/1:0,8:8:20.65:483,21,0	1/1:0,11:11:24.08:553,24,0	1/1:0,8:8:18.06:415,18,0	1/1:1,7:8:17.98:316,18,0	1/1:0,9:10:21.07:483,21,0	1/1:0,15:13:33.11:751,33,0	1/1:0,27:26:66.12:1422,66,0	1/1:0,6:6:12.04:276,12,0	1/1:0,6:6:18.06:415,18,0	1/1:0,14:14:20.85:434,21,0	1/1:0,5:5:15.05:346,15,0	1/1:0,15:15:24.08:553,24,0	1/1:0,18:19:54.15:1074,54,0	1/1:0,25:25:63.17:1401,63,0	1/1:1,9:9:18.06:412,18,0
chr10	61212291	.	A	AC	1262.37	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=-8.459;DP=507;FS=2.300;HRun=1;HaplotypeScore=43.3170;InbreedingCoeff=0.6594;MQ=65.02;MQ0=3;MQRankSum=1.893;QD=25.76;ReadPosRankSum=-4.795;VQSLOD=2.1138;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:33.11:0,33,425	0/0:3,0:3:9.03:0,9,117	0/1:8,0:2:0.58:1,0,20	0/0:20,0:8:8.98:0,9,96	0/0:13,0:13:36.11:0,36,455	0/0:24,0:24:69.21:0,69,882	0/0:14,0:14:42.14:0,42,545	1/1:9,32:34:96.27:1357,96,0	0/0:17,0:17:51.17:0,51,661	0/0:28,0:28:84.24:0,84,1072	0/0:22,0:22:66.20:0,66,842	0/0:17,0:17:51.17:0,51,661	0/0:12,0:12:36.10:0,36,453	0/0:13,0:13:39.11:0,39,492	0/0:20,0:20:57.18:0,57,727	0/0:15,0:15:45.15:0,45,584	0/0:15,0:15:45.11:0,45,553	0/0:11,0:11:29.88:0,30,341	0/0:28,0:24:69.18:0,69,844	0/0:27,0:27:78.24:0,78,998	0/0:18,0:18:54.17:0,54,689	0/0:12,0:12:36.12:0,36,467	0/0:13,0:13:39.13:0,39,506	0/0:20,0:20:57.17:0,57,724	0/0:18,0:17:51.17:0,51,662	0/0:24,0:24:72.22:0,72,912	0/0:41,0:41:99:0,120,1544	0/0:2,0:2:6.02:0,6,78
chr10	61214192	.	G	GTTT	9334.82	PASS	AB=0.583;AC=47;AF=0.839;AN=56;BaseQRankSum=-8.562;DP=621;FS=15.398;HRun=11;HaplotypeScore=98.4905;InbreedingCoeff=0.6059;MQ=64.38;MQ0=0;MQRankSum=-2.656;QD=17.10;ReadPosRankSum=0.931;VQSLOD=1.8069;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,34:38:42.59:640,43,0	1/1:1,7:8:12:189,12,0	0/0:20,0:17:14.80:0,15,303	0/0:14,0:13:20.07:0,20,186	1/1:5,26:36:63.20:706,63,0	0/1:9,0:26:16.61:32,0,17	1/1:2,0:10:7.48:16,7,0	0/0:3,0:36:59.64:0,60,444	1/1:4,25:29:45.15:847,45,0	1/1:4,24:31:54.09:608,54,0	1/1:4,16:24:38.94:540,39,0	1/1:4,13:18:19.31:342,19,0	0/1:4,11:15:0.50:298,0,0	1/1:2,13:16:18.06:338,18,0	1/1:3,21:25:28.34:509,28,0	1/1:5,8:16:30.04:464,30,0	1/1:1,17:22:21.05:361,21,0	1/1:1,15:16:21.07:395,21,0	1/1:10,13:26:44.39:464,44,0	1/1:7,18:29:60.71:726,61,0	1/1:1,15:17:18.04:305,18,0	1/1:3,0:25:24.64:84,25,0	0/1:7,0:29:13.10:14,0,13	1/1:2,0:21:13.71:30,14,0	1/1:4,9:19:22.27:319,22,0	1/1:5,13:19:41.53:437,42,0	1/1:4,17:25:33.08:559,33,0	1/1:0,4:4:6.02:113,6,0
chr10	61215659	.	A	AT	14606.31	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-4.568;DP=540;FS=48.503;HRun=8;HaplotypeScore=51.4974;InbreedingCoeff=0.9848;MQ=60.91;MQ0=1;MQRankSum=4.863;QD=28.87;ReadPosRankSum=4.754;VQSLOD=1.9424;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,19:22:54.16:623,54,0	1/1:0,7:7:21.06:242,21,0	0/0:19,0:14:34.50:0,34,293	0/0:15,0:15:23.79:0,24,209	1/1:7,27:34:81.24:935,81,0	1/1:2,24:26:75.22:863,75,0	1/1:3,19:22:49.03:556,49,0	1/1:8,22:28:60.16:680,60,0	1/1:3,23:26:72.21:830,72,0	1/1:5,26:31:78.22:891,78,0	1/1:2,18:20:48.61:554,49,0	1/1:0,7:7:18.05:208,18,0	1/1:5,21:26:69.19:784,69,0	1/1:1,12:13:33.10:381,33,0	1/1:0,13:13:36.11:415,36,0	1/1:1,16:17:48.14:554,48,0	1/1:2,21:24:54.10:684,54,0	1/1:3,16:19:39.12:450,39,0	1/1:1,12:13:36.07:401,36,0	1/1:2,32:34:96.25:1093,96,0	1/1:1,6:7:18.05:208,18,0	1/1:0,16:16:45.13:519,45,0	1/1:0,20:20:48.14:554,48,0	1/1:2,12:14:24.07:277,24,0	1/1:1,11:12:30.09:346,30,0	1/1:2,22:24:63.19:726,63,0	1/1:2,20:22:51.15:589,51,0	1/1:0,7:7:21.06:242,21,0
chr10	61216651	.	CTCTT	C	3016.63	PASS	AB=1.000;AC=34;AF=0.654;AN=52;BaseQRankSum=-0.790;DP=397;FS=0.000;HRun=0;HaplotypeScore=128.6228;InbreedingCoeff=0.3625;MQ=47.28;MQ0=17;MQRankSum=5.447;QD=10.40;ReadPosRankSum=6.293;VQSLOD=2.3838;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	1/1:6,0:6:2.64:57,3,0	0/0:5,0:1:0:0,0,0	./.	1/1:22,0:22:2.82:18,3,0	0/1:15,0:15:48.16:48,0,124	0/0:17,0:17:21.39:0,21,249	0/0:22,0:20:2.97:0,3,108	1/1:14,0:14:9.18:132,9,0	1/1:27,0:27:24.60:444,25,0	1/1:28,1:28:21.84:227,22,0	1/1:6,0:6:8.96:69,9,0	0/1:15,0:15:23.27:102,0,23	1/1:7,0:7:2.25:44,2,0	0/0:15,0:15:3.13:0,3,20	1/1:11,0:10:8.96:89,9,0	1/1:7,0:6:5.83:38,6,0	0/1:6,0:4:24.06:25,0,24	1/1:17,1:17:7.12:280,7,0	1/1:18,1:19:39.67:386,40,0	1/1:18,0:15:15.17:195,15,0	0/0:10,0:9:3.65:0,4,134	0/0:16,0:16:11.62:0,12,158	0/0:8,0:7:5.42:0,5,24	0/1:17,0:17:18.80:19,0,41	1/1:19,1:20:52.41:517,52,0	1/1:18,0:18:41.27:316,41,0	1/1:14,0:11:12.76:173,13,0
chr10	61216652	.	TCTTTCTCTC	T	54.04	PASS	AB=0.949;AC=6;AF=0.111;AN=54;BaseQRankSum=4.844;DP=398;FS=13.630;HRun=0;HaplotypeScore=165.7279;InbreedingCoeff=0.2221;MQ=47.36;MQ0=17;MQRankSum=0.301;QD=0.73;ReadPosRankSum=-2.412;VQSLOD=1.8081;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,1:8:2.22:7,2,0	0/0:6,0:6:5.88:0,6,44	0/0:5,0:1:0:0,0,0	./.	0/1:21,3:24:3.72:4,0,38	0/0:16,0:16:27.66:0,28,786	0/0:17,0:17:37.36:0,37,642	0/0:22,0:20:48.09:0,48,831	0/1:13,1:14:0.84:125,0,1	0/0:25,0:25:17.34:0,17,548	0/0:29,0:28:6.61:0,7,317	0/0:6,0:6:5.88:0,6,124	0/0:15,0:15:26.48:0,26,624	0/0:7,0:7:5.02:0,5,91	0/0:15,0:15:2.07:0,2,154	0/0:11,0:10:8.94:0,9,70	0/1:7,0:6:4.03:4,0,7	0/0:6,0:4:11.78:0,12,123	0/0:18,0:17:30.25:0,30,317	0/0:19,0:19:4.98:0,5,350	0/1:18,0:15:5.77:6,0,199	0/0:10,0:9:23.45:0,23,431	0/0:16,0:16:34.32:0,34,654	0/0:7,0:6:5.36:0,5,26	0/0:17,0:17:10.59:0,11,280	0/0:20,0:20:22.67:0,23,320	0/0:18,0:18:6.43:0,6,352	0/0:14,0:11:16.05:0,16,343
chr10	61216653	.	CTT	C	3458.76	PASS	AB=1.000;AC=40;AF=0.769;AN=52;BaseQRankSum=-1.703;DP=398;FS=5.672;HRun=3;HaplotypeScore=120.1280;InbreedingCoeff=0.2974;MQ=47.63;MQ0=16;MQRankSum=6.204;QD=10.39;ReadPosRankSum=8.220;VQSLOD=0.0446;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	./.	1/1:6,0:6:2.70:33,3,0	0/0:5,0:2:2.99:0,3,24	./.	1/1:25,0:24:2.82:18,3,0	0/1:16,0:16:34.25:87,0,34	0/0:17,0:17:19.77:0,20,207	0/0:24,0:22:8.56:0,9,156	1/1:14,0:14:7.75:103,8,0	1/1:25,0:25:28.93:526,29,0	1/1:28,1:28:21.84:241,22,0	1/1:6,0:6:8.53:69,9,0	1/1:15,0:15:18.79:156,19,0	1/1:7,0:7:5.65:50,6,0	1/1:15,0:15:2.02:26,2,0	1/1:1,10:10:8.96:100,9,0	1/1:2,5:6:5.83:38,6,0	0/1:6,0:4:18.31:30,0,18	1/1:18,0:17:7.59:237,8,0	1/1:19,0:19:47.65:416,48,0	1/1:18,0:15:14.83:203,15,0	0/1:10,0:9:20.51:21,0,82	0/1:17,0:17:13.21:13,0,58	0/0:7,0:6:5.42:0,5,24	1/1:17,0:17:0.92:36,1,0	1/1:20,0:20:52.45:457,52,0	1/1:15,3:18:41.08:387,41,0	1/1:13,1:11:18.01:212,18,0
chr10	61216659	.	CTCTCTCTGTG	C	7950.80	PASS	AB=0.853;AC=34;AF=0.607;AN=56;BaseQRankSum=1.669;DP=391;FS=81.150;HRun=0;HaplotypeScore=138.9320;InbreedingCoeff=-0.1678;MQ=49.44;MQ0=11;MQRankSum=-0.944;QD=23.32;ReadPosRankSum=1.161;VQSLOD=0.6923;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,7:8:3.01:55,3,0	1/1:7,0:7:10.95:186,11,0	0/0:5,0:3:9.03:0,9,180	0/0:5,0:1:3.01:0,3,72	0/1:6,1:22:22.45:41,0,22	0/1:14,0:14:14.13:14,0,345	0/1:15,0:15:99:164,0,213	0/0:23,0:22:56.03:0,56,773	1/1:12,2:14:28.72:684,29,0	0/1:7,18:25:70.70:1050,0,71	0/1:11,21:32:66.63:440,0,67	1/1:4,1:5:11.47:179,11,0	0/1:15,0:15:99:255,0,295	0/1:4,1:5:14.05:55,0,14	0/1:4,10:14:45:45,0,76	1/1:11,0:11:11.25:150,11,0	1/1:7,0:6:3.01:95,3,0	0/1:4,0:4:13.71:51,0,14	1/1:3,12:14:36.26:659,36,0	0/1:20,0:20:17.35:915,0,17	0/1:15,0:13:45.32:400,0,45	0/1:13,0:12:99:134,0,169	0/1:16,0:16:99:204,0,294	1/1:8,0:7:5.95:83,6,0	0/0:6,11:17:6.75:0,7,107	1/1:3,17:20:23.22:1114,23,0	1/1:19,1:20:6.92:776,7,0	0/1:12,1:11:47.60:202,0,48
chr10	61216665	.	CTGTGTGTGTG	C	2285.86	PASS	AB=0.934;AC=28;AF=0.500;AN=56;BaseQRankSum=3.083;DP=391;FS=49.051;HRun=0;HaplotypeScore=159.2684;InbreedingCoeff=0.0430;MQ=50.00;MQ0=13;MQRankSum=-0.385;QD=8.02;ReadPosRankSum=0.423;VQSLOD=1.1075;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:10:1.25:3,1,0	0/1:1,0:7:6.05:6,0,11	0/0:10,0:7:21.07:0,21,808	0/0:8,0:3:9.03:0,9,294	0/0:21,0:21:8.21:0,8,233	1/1:9,1:10:6.19:99,6,0	1/1:8,9:17:15.05:461,15,0	0/0:20,0:18:30.10:0,30,1182	0/1:15,0:15:13.66:159,0,14	0/1:24,0:24:99:149,0,170	0/1:26,0:26:8.98:9,0,67	0/0:5,0:5:2.47:0,2,100	0/0:14,0:15:1.67:0,2,411	1/1:3,0:3:0.47:1,0,0	0/0:11,0:11:3.01:0,3,42	0/0:9,0:12:4.49:0,4,64	1/1:9,0:8:0.55:18,1,0	0/0:4,0:3:5.97:0,6,59	0/1:15,0:14:77.99:78,0,169	0/1:20,0:21:58.20:97,0,58	0/1:13,0:11:56.68:57,0,152	1/1:5,8:13:12.02:368,12,0	1/1:8,11:18:18.06:544,18,0	1/1:1,8:8:5.96:184,6,0	1/1:17,0:17:0.63:2,1,0	0/1:20,0:20:21.35:154,0,21	0/1:21,0:23:44.56:45,0,238	0/1:12,0:11:12.21:12,0,285
chr10	61218154	.	A	AT	1005.40	PASS	AC=2;AF=0.037;AN=54;BaseQRankSum=-8.446;DP=366;FS=0.716;HRun=6;HaplotypeScore=35.3893;InbreedingCoeff=0.8517;MQ=78.16;MQ0=0;MQRankSum=0.476;QD=29.57;ReadPosRankSum=-4.012;VQSLOD=2.0216;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:72.16:0,72,734	0/0:5,0:5:15.03:0,15,149	0/0:10,0:10:30.05:0,30,294	0/0:9,0:9:15.03:0,15,149	0/0:30,0:30:69.13:0,69,698	0/0:17,0:17:51.10:0,51,514	0/0:6,0:6:15.02:0,15,147	1/1:3,31:34:90.25:1100,90,0	0/0:8,0:8:21.05:0,21,214	0/0:17,0:17:48.09:0,48,477	0/0:24,0:24:63.12:0,63,635	0/0:4,0:4:12.03:0,12,122	0/0:8,0:8:21.03:0,21,208	0/0:11,0:11:33.06:0,33,330	0/0:11,0:10:27.06:0,27,275	0/0:6,0:6:12.03:0,12,122	0/0:21,0:21:60.10:0,60,603	0/0:9,0:9:21.01:0,21,203	0/0:17,0:17:39.08:0,39,397	0/0:15,0:15:39.09:0,39,398	0/0:9,0:9:24.04:0,24,237	0/0:4,0:4:12.02:0,12,118	0/0:15,0:15:36.06:0,36,357	./.	0/0:15,0:15:36.07:0,36,363	0/0:17,0:17:45.10:0,45,458	0/0:13,0:13:39.09:0,39,397	0/0:5,0:5:15.03:0,15,153
chr10	61218617	.	GGAGAGGATCCTTCCA	G	7692.44	PASS	AB=0.567;AC=9;AF=0.161;AN=56;BaseQRankSum=12.258;DP=640;FS=3.077;HRun=0;HaplotypeScore=266.5683;InbreedingCoeff=0.9115;MQ=76.43;MQ0=0;MQRankSum=-12.602;QD=89.45;ReadPosRankSum=0.850;VQSLOD=4.3772;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,108,7246	0/0:13,0:13:36.12:0,36,2615	0/0:20,0:20:60.20:0,60,3725	0/0:22,0:22:63.22:0,63,3435	0/0:19,0:19:57.20:0,57,4131	1/1:1,6:7:18.06:795,18,0	1/1:2,17:19:48.16:2130,48,0	0/0:36,0:36:99:0,105,7373	0/0:27,0:27:81.28:0,81,5473	0/0:37,0:37:99:0,105,7473	0/0:18,0:18:51.18:0,51,3364	0/0:23,0:23:66.23:0,66,4609	0/0:28,0:28:84.27:0,84,5641	0/0:23,0:23:69.24:0,69,4840	0/0:21,0:21:63.22:0,63,4367	0/0:18,0:18:54.17:0,54,3610	0/0:32,0:32:96.33:0,96,6591	0/0:16,0:16:48.16:0,48,3539	0/0:20,0:20:57.20:0,57,3883	0/0:31,0:31:84.27:0,84,5312	0/0:33,0:33:96.33:0,96,6926	1/1:6,23:29:57.20:2516,57,0	1/1:3,11:14:33.11:1451,33,0	0/1:4,13:17:2.83:800,0,3	0/0:19,0:19:57.17:0,57,3943	0/0:30,0:30:84.28:0,84,5706	0/0:24,0:24:72.23:0,72,4628	0/0:6,0:6:18.06:0,18,1157
chr10	61219265	.	G	GA	15921.72	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-5.665;DP=548;FS=10.432;HRun=6;HaplotypeScore=51.9193;InbreedingCoeff=0.9905;MQ=58.74;MQ0=0;MQRankSum=4.493;QD=30.86;ReadPosRankSum=3.321;VQSLOD=4.8954;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,27:31:84.22:1027,84,0	1/1:0,9:9:24.08:302,24,0	0/0:13,0:10:20.31:0,20,212	0/0:19,0:15:29.74:0,30,299	1/1:4,18:22:48.07:562,48,0	1/1:3,18:21:51.16:642,51,0	1/1:0,8:8:24.08:302,24,0	1/1:3,19:17:42.12:515,42,0	1/1:4,12:16:27.09:340,27,0	1/1:4,30:34:90.28:1120,90,0	1/1:0,25:25:72.19:883,72,0	1/1:0,9:9:24.08:302,24,0	1/1:2,11:13:33.11:415,33,0	1/1:0,10:10:27.09:340,27,0	1/1:2,13:14:33.11:415,33,0	1/1:1,15:16:42.13:528,42,0	1/1:5,26:30:75.24:943,75,0	1/1:4,18:22:23.95:611,24,0	1/1:5,21:25:60.12:707,60,0	1/1:0,32:32:96.18:1154,96,0	1/1:1,10:11:27.09:340,27,0	1/1:0,11:11:27.09:340,27,0	1/1:5,25:30:72.23:903,72,0	1/1:2,18:20:51.16:631,51,0	1/1:2,18:20:51.16:642,51,0	1/1:2,19:21:54.17:679,54,0	1/1:5,24:28:69.22:862,69,0	1/1:1,11:12:33.99:417,34,0
chr10	61220983	.	A	AC	12172.35	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-5.105;DP=553;FS=2.820;HRun=1;HaplotypeScore=154.4608;InbreedingCoeff=0.9138;MQ=48.43;MQ0=11;MQRankSum=2.175;QD=25.79;ReadPosRankSum=5.401;VQSLOD=4.8504;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,31:36:21.45:597,21,0	1/1:1,6:7:12.04:184,12,0	0/0:49,0:17:43.74:0,44,612	0/0:32,0:10:27.08:0,27,358	1/1:2,11:13:11.33:274,11,0	1/1:2,21:24:39.60:609,40,0	1/1:2,8:10:14.98:219,15,0	1/1:3,18:19:57.18:869,57,0	1/1:1,21:20:29.58:543,30,0	1/1:4,17:20:51.94:782,52,0	1/1:3,22:25:35.55:531,36,0	1/1:3,9:14:23.37:254,23,0	1/1:5,12:17:27.39:441,27,0	1/1:3,13:16:33.35:409,33,0	1/1:1,24:25:43.96:598,44,0	1/1:1,15:17:31.82:369,32,0	1/1:2,12:13:24.08:376,24,0	1/1:2,4:5:9.74:188,10,0	1/1:4,13:17:44.74:657,45,0	1/1:3,12:15:24.17:304,24,0	1/1:1,24:23:29.80:522,30,0	1/1:3,23:25:42.61:668,43,0	1/1:4,18:21:24.51:373,25,0	1/1:2,16:18:30.08:456,30,0	1/1:2,13:17:34.35:429,34,0	1/1:2,12:14:39.04:611,39,0	1/1:2,18:23:52.42:725,52,0	1/1:0,4:4:12.04:184,12,0
chr10	61221011	.	CA	C	4510.60	PASS	AB=0.914;AC=46;AF=0.821;AN=56;BaseQRankSum=-6.253;DP=636;FS=38.115;HRun=2;HaplotypeScore=162.5591;InbreedingCoeff=0.2074;MQ=49.25;MQ0=66;MQRankSum=2.263;QD=8.53;ReadPosRankSum=8.896;VQSLOD=-0.2891;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:31,1:32:27.71:28,0,51	1/1:5,2:7:9.02:105,9,0	0/0:56,1:16:38.21:0,38,509	0/0:50,0:18:44.74:0,45,559	0/1:9,1:9:23.20:57,0,23	1/1:15,7:17:19.14:166,19,0	1/1:7,10:15:25.22:267,25,0	1/1:28,3:25:62.27:701,62,0	0/1:20,1:19:8.02:71,0,8	1/1:27,3:27:62.97:545,63,0	1/1:14,6:18:4.65:108,5,0	1/1:14,1:15:1.05:86,1,0	1/1:20,2:19:17.87:227,18,0	1/1:17,1:16:2.54:40,3,0	1/1:16,6:21:2.19:217,2,0	0/1:15,6:20:0.48:81,0,0	1/1:20,3:20:18.13:150,18,0	1/1:6,2:5:11.06:109,11,0	1/1:21,0:19:46.73:471,47,0	0/1:19,1:17:1.18:29,0,1	0/1:32,3:27:5.33:31,0,5	1/1:15,3:17:7.93:54,8,0	1/1:22,2:21:3.15:9,3,0	1/1:10,4:13:9:69,9,0	1/1:15,2:14:9.58:140,10,0	1/1:22,2:21:47.71:449,48,0	1/1:28,1:26:31.05:251,31,0	1/1:4,2:3:8.01:50,8,0
chr10	61221012	.	A	AC	7675.34	PASS	AB=0.532;AC=50;AF=0.893;AN=56;BaseQRankSum=-3.717;DP=632;FS=23.709;HRun=1;HaplotypeScore=152.7680;InbreedingCoeff=0.5262;MQ=50.00;MQ0=66;MQRankSum=0.720;QD=14.56;ReadPosRankSum=5.089;VQSLOD=3.1176;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:1,17:30:11.03:98,0,11	1/1:2,4:7:9.03:114,9,0	0/0:55,0:16:44.14:0,44,506	0/0:50,0:18:45:0,45,546	0/1:3,4:14:3.70:56,0,4	1/1:7,13:15:23.29:321,23,0	1/1:10,6:14:26.04:339,26,0	1/1:6,5:22:65.40:758,65,0	1/1:1,7:22:11.51:186,12,0	1/1:5,20:30:72.21:938,72,0	1/1:7,8:16:11.46:120,11,0	1/1:1,11:15:12.94:133,13,0	1/1:3,13:20:24.39:357,24,0	1/1:1,12:14:16.11:187,16,0	1/1:9,4:22:37.93:389,38,0	1/1:7,8:21:26.20:249,26,0	1/1:3,16:20:21.06:262,21,0	1/1:3,2:5:12.01:147,12,0	1/1:1,17:19:51.15:663,51,0	1/1:3,13:19:18.15:164,18,0	1/1:10,21:28:0.04:32,0,0	1/1:3,14:16:12.51:182,13,0	1/1:2,20:19:8.99:144,9,0	1/1:4,8:11:15.04:229,15,0	1/1:3,9:15:23.78:321,24,0	1/1:5,15:21:54.15:665,54,0	1/1:2,18:24:40.75:496,41,0	1/1:2,1:3:9.03:125,9,0
chr10	61224375	.	G	GGAGGGGT	143.45	PASS	AC=2;AF=0.042;AN=48;BaseQRankSum=0.848;DP=209;FS=0.000;HRun=0;HaplotypeScore=58.5961;InbreedingCoeff=0.4679;MQ=31.06;MQ0=26;MQRankSum=2.911;QD=15.94;ReadPosRankSum=-1.610;VQSLOD=1.8775;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:15:38.69:0,39,677	0/0:4,0:4:11.97:0,12,245	./.	./.	0/0:14,0:12:29.99:0,30,649	0/0:7,0:5:12.03:0,12,265	0/0:2,0:2:2.96:0,3,20	1/1:1,8:8:20.68:234,21,0	0/0:5,0:5:12:0,12,252	0/0:11,0:10:26.89:0,27,406	0/0:12,0:12:29.90:0,30,550	0/0:8,0:4:9.02:0,9,178	0/0:4,0:2:6.02:0,6,156	0/0:3,0:3:9.03:0,9,202	0/0:11,0:11:30.05:0,30,605	0/0:1,0:1:3.01:0,3,81	0/0:5,0:3:6:0,6,105	0/0:4,0:2:6.01:0,6,109	0/0:17,0:15:41.99:0,42,844	0/0:18,0:18:50.85:0,51,832	0/0:12,0:9:15:0,15,332	./.	0/0:5,0:4:11.95:0,12,206	./.	0/0:7,0:7:11.92:0,12,195	0/0:12,0:11:30.02:0,30,582	0/0:10,0:9:18.01:0,18,316	0/0:5,0:5:11.97:0,12,204
chr10	61224441	.	TAA	T	9250.49	PASS	AB=0.600;AC=41;AF=0.732;AN=56;BaseQRankSum=-8.864;DP=469;FS=0.000;HRun=12;HaplotypeScore=75.0316;InbreedingCoeff=0.7885;MQ=50.63;MQ0=7;MQRankSum=5.659;QD=21.87;ReadPosRankSum=1.517;VQSLOD=4.4593;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:12,20:31:29.12:593,29,0	1/1:2,5:7:9.19:92,9,0	0/0:1,0:1:2.37:0,2,8	0/0:3,0:2:2.99:0,3,23	1/1:4,27:31:75.10:755,75,0	0/1:3,1:8:12.06:12,0,46	0/0:3,0:10:20.48:0,20,106	0/0:12,0:14:17.09:0,17,147	1/1:2,17:19:48.06:487,48,0	1/1:9,18:27:54.04:549,54,0	1/1:2,22:24:56.82:538,57,0	1/1:1,8:9:24.03:244,24,0	1/1:0,13:13:33.03:335,33,0	1/1:2,10:12:33.05:334,33,0	1/1:6,17:23:42:426,42,0	1/1:0,11:11:33.07:335,33,0	1/1:1,18:17:51.11:517,51,0	1/1:2,13:12:36.08:366,36,0	1/1:8,13:18:5.94:276,6,0	1/1:8,28:36:68.95:753,69,0	1/1:5,14:19:36.06:366,36,0	0/0:0,0:6:14.97:0,15,53	0/0:1,0:8:17.82:0,18,72	0/0:1,0:2:4.99:0,5,18	1/1:3,18:22:44.78:510,45,0	1/1:7,15:22:45.03:450,45,0	1/1:2,37:38:99:1036,102,0	1/1:3,10:13:27.05:275,27,0
chr10	61224484	.	T	TA	1116.66	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=0.115;DP=625;FS=2.826;HRun=8;HaplotypeScore=121.5985;InbreedingCoeff=0.9575;MQ=56.08;MQ0=2;MQRankSum=-4.886;QD=17.18;ReadPosRankSum=-3.335;VQSLOD=2.2124;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:41,1:42:64.99:0,65,927	0/0:8,0:8:15:0,15,137	0/0:5,0:4:12:0,12,109	0/0:7,0:7:14.87:0,15,125	0/0:42,0:42:99:0,120,1081	1/1:0,10:10:30.08:339,30,0	1/1:3,5:8:12.04:138,12,0	1/1:3,0:22:49.68:249,50,0	0/0:28,0:28:75.02:0,75,682	0/0:33,0:33:81.03:0,81,739	0/0:27,0:27:78.02:0,78,704	0/0:15,0:15:39:0,39,352	0/0:21,0:21:45.01:0,45,411	0/0:19,0:19:53.96:0,54,477	0/0:20,0:20:54:0,54,486	0/0:21,0:21:60.02:0,60,544	0/0:29,0:27:72.03:0,72,658	0/0:21,0:20:57:0,57,513	0/0:39,0:38:99:0,111,1012	0/0:49,0:49:99:0,141,1281	0/0:15,0:15:24:0,24,219	1/1:2,9:10:23.99:259,24,0	1/1:1,7:8:21.06:242,21,0	1/1:3,3:6:6.02:69,6,0	0/0:25,0:25:65.99:0,66,596	0/0:31,0:31:79.84:0,80,716	0/0:48,0:46:99:0,129,1172	0/0:15,0:15:36:0,36,324
chr10	61224510	.	TA	T	4495.24	PASS	AB=0.731;AC=20;AF=0.357;AN=56;BaseQRankSum=4.341;DP=667;FS=20.149;HRun=10;HaplotypeScore=98.2104;InbreedingCoeff=-0.5682;MQ=58.00;MQ0=4;MQRankSum=-1.228;QD=7.87;ReadPosRankSum=3.185;VQSLOD=1.8382;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:31,20:51:99:416,0,599	0/1:6,1:7:40.24:40,0,54	0/0:7,0:5:9.01:0,9,99	0/0:6,1:7:9.01:0,9,90	0/1:27,21:48:99:422,0,442	0/0:4,0:14:25.28:0,25,134	0/0:5,0:10:13.42:0,13,92	0/0:27,0:28:62.96:0,63,656	0/1:11,17:28:99:338,0,246	0/1:21,12:33:99:282,0,320	0/1:20,11:31:99:188,0,378	0/1:9,11:20:99:189,0,154	0/1:9,7:16:99:146,0,123	0/1:8,11:19:99:232,0,178	0/1:15,6:21:99:117,0,180	0/1:12,9:21:99:177,0,265	0/1:27,6:31:69.04:69,0,667	0/1:21,4:24:80.23:80,0,452	0/1:26,16:39:99:317,0,456	0/1:28,25:53:99:516,0,521	0/1:5,4:9:46.19:86,0,46	0/0:4,0:10:19.18:0,19,108	0/0:7,0:10:23.95:0,24,132	0/0:2,0:9:22.73:0,23,108	0/1:18,6:24:99:125,0,341	0/1:21,12:33:99:307,0,317	0/1:26,16:41:99:329,0,344	0/1:9,6:14:99:117,0,193
chr10	61224698	.	G	GA	25769.24	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-6.131;DP=880;FS=18.785;HRun=7;HaplotypeScore=83.5271;InbreedingCoeff=0.9930;MQ=61.94;MQ0=1;MQRankSum=-0.519;QD=30.32;ReadPosRankSum=5.061;VQSLOD=3.2789;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:11,40:54:91.26:1257,91,0	1/1:2,13:15:36.11:435,36,0	0/0:16,0:13:21.02:0,21,199	0/0:14,0:14:32.63:0,33,293	1/1:5,40:45:99:1363,120,0	1/1:1,19:20:51.16:616,51,0	1/1:1,11:12:27.08:326,27,0	1/1:5,22:27:63.09:727,63,0	1/1:5,37:42:99:1339,111,0	1/1:4,56:60:99:1969,168,0	1/1:0,33:33:99:1195,99,0	1/1:3,21:24:57.17:689,57,0	1/1:3,27:30:78.24:942,78,0	1/1:6,38:44:99:1327,111,0	1/1:4,27:31:78.24:942,78,0	1/1:1,27:28:78.24:942,78,0	1/1:4,47:51:99:1636,137,0	1/1:6,31:37:87.17:1017,87,0	1/1:8,32:40:87.25:1035,87,0	1/1:0,35:35:99:1179,99,0	1/1:2,28:30:81.25:979,81,0	1/1:1,18:19:48.15:579,48,0	1/1:1,9:10:21.06:254,21,0	1/1:0,10:10:21.06:254,21,0	1/1:4,22:26:54.17:652,54,0	1/1:3,35:38:99:1251,108,0	1/1:3,59:63:99:2029,171,0	1/1:1,23:24:69.21:834,69,0
chr10	61225687	.	GA	G	1528.03	PASS	AB=0.524;AC=8;AF=0.143;AN=56;BaseQRankSum=-1.816;DP=964;FS=1.350;HRun=10;HaplotypeScore=151.1135;InbreedingCoeff=0.7554;MQ=63.83;MQ0=1;MQRankSum=-0.458;QD=17.77;ReadPosRankSum=0.541;VQSLOD=2.3439;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:57,1:62:99:0,129,1654	0/0:14,0:15:41.95:0,42,446	0/0:19,1:14:16.87:0,17,218	0/0:16,1:14:3.10:0,3,184	0/0:55,1:55:99:0,121,1529	0/1:2,20:22:6.37:409,0,6	0/1:1,9:11:2.30:205,0,2	0/0:12,0:24:45.27:0,45,283	0/0:32,1:33:67.20:0,67,969	0/0:57,0:57:99:0,124,1593	0/0:55,1:56:99:0,130,1608	0/0:20,1:21:22.07:0,22,472	0/0:33,1:34:58.15:0,58,854	0/0:27,0:27:66.18:0,66,730	0/0:26,0:25:72.19:0,72,796	0/0:30,0:31:87.24:0,87,963	0/0:37,0:39:99:0,102,1109	0/0:30,0:32:66.96:0,67,859	0/0:43,0:41:99:0,111,1197	0/0:67,0:70:99:0,187,1971	0/0:37,2:39:47.15:0,47,969	1/1:3,15:18:41.97:363,42,0	1/1:4,25:29:65.98:573,66,0	1/1:1,5:6:14.99:130,15,0	0/0:47,0:47:99:0,117,1256	0/0:57,1:58:99:0,130,1653	0/0:46,1:47:89.07:0,89,1204	0/0:17,0:18:44.95:0,45,479
chr10	61226397	.	T	TA	494.96	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-5.994;DP=1010;FS=2.889;HRun=9;HaplotypeScore=168.2275;InbreedingCoeff=0.9915;MQ=56.43;MQ0=7;MQRankSum=-1.734;QD=19.80;ReadPosRankSum=-3.912;VQSLOD=1.2109;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:54:99:0,119,1039	0/0:28,0:28:74.98:0,75,650	0/0:25,0:18:41.93:0,42,361	0/0:13,0:9:24:0,24,208	0/0:66,0:66:99:0,164,1423	0/0:27,0:27:68.96:0,69,594	0/0:14,0:14:32.98:0,33,286	1/1:5,19:22:54.14:590,54,0	0/0:32,1:33:44.78:0,45,617	0/0:52,0:51:99:0,128,1097	0/0:44,0:43:99:0,105,901	0/0:31,0:31:83.98:0,84,727	0/0:37,0:37:95.96:0,96,829	0/0:47,0:46:99:0,105,911	0/0:30,0:30:71.96:0,72,621	0/0:30,0:30:74.96:0,75,649	0/0:39,0:39:91.78:0,92,796	0/0:17,0:17:38.93:0,39,338	0/0:42,0:38:99:0,108,931	0/0:46,0:46:99:0,126,1086	0/0:38,0:38:99:0,102,879	0/0:21,1:22:21.06:0,21,406	0/0:22,2:24:23.81:0,24,435	0/0:24,0:24:65.99:0,66,572	0/0:52,0:52:99:0,123,1067	0/0:61,0:61:99:0,162,1397	0/0:46,0:45:99:0,117,1016	0/0:39,0:39:99:0,108,937
chr10	61227394	.	ACTTGAGC	A	1247.30	PASS	AB=0.726;AC=5;AF=0.104;AN=48;BaseQRankSum=7.017;DP=515;FS=60.504;HRun=0;HaplotypeScore=49.3649;InbreedingCoeff=-0.0503;MQ=36.32;MQ0=76;MQRankSum=-3.907;QD=15.79;ReadPosRankSum=-0.108;VQSLOD=0.1700;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:12:12.04:0,12,472	0/0:10,1:6:2.80:0,3,121	0/0:14,0:5:11.22:0,11,198	0/0:16,0:2:2.90:0,3,16	./.	0/0:17,0:8:2.97:0,3,20	0/0:19,0:13:6.02:0,6,242	./.	0/0:28,0:14:15.05:0,15,604	0/0:14,0:3:6.02:0,6,242	0/1:8,4:7:66.74:67,0,111	0/0:8,0:5:6.02:0,6,231	0/0:10,0:5:3.01:0,3,121	0/0:18,0:8:15.05:0,15,604	0/0:11,0:7:6.02:0,6,242	0/0:9,0:7:9.03:0,9,336	0/0:34,0:26:15.05:0,15,593	0/0:22,0:15:24.08:0,24,904	0/0:19,0:2:6.02:0,6,242	0/1:13,10:19:99:530,0,324	0/0:33,0:23:21.03:0,21,743	./.	0/0:15,0:7:3.01:0,3,121	0/0:25,0:17:9.03:0,9,363	0/1:19,11:24:99:745,0,316	0/0:14,0:9:27.09:0,27,1088	1/1:14,0:5:0.47:1,0,0	./.
chr10	61227656	.	TCCCTGG	T	658.40	PASS	AC=14;AF=0.778;AN=18;BaseQRankSum=-1.448;DP=382;FS=0.000;HRun=0;HaplotypeScore=15.0984;MQ=8.71;MQ0=251;MQRankSum=0.579;QD=5.83;ReadPosRankSum=-0.579;VQSLOD=0.6460;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,2:1:3.01:0,3,107	./.	./.	./.	./.	1/1:11,3:1:3.01:71,3,0	./.	./.	0/0:7,8:5:0:0,0,0	1/1:10,6:2:3.01:71,3,0	./.	1/1:5,9:4:9.03:213,9,0	./.	./.	./.	1/1:3,9:4:6.02:139,6,0	./.	1/1:16,1:1:3.01:68,3,0	./.	./.	./.	./.	./.	1/1:18,3:2:3.01:71,3,0	./.	./.	1/1:12,7:5:6.02:106,6,0	./.
chr10	61229894	.	GA	G	969.70	PASS	AC=20;AF=0.833;AN=24;BaseQRankSum=-4.789;DP=130;FS=68.257;HRun=1;HaplotypeScore=27.7343;InbreedingCoeff=0.5642;MQ=65.91;MQ0=8;MQRankSum=-2.144;QD=26.21;ReadPosRankSum=4.411;VQSLOD=-0.5738;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	1/1:0,3:2:6.02:82,6,0	0/0:49,0:21:55.74:0,56,649	0/0:35,0:13:32.35:0,32,387	1/1:0,2:2:6.02:82,6,0	./.	./.	./.	./.	1/1:0,8:7:21.07:291,21,0	1/1:0,3:1:3.01:42,3,0	./.	./.	1/1:0,2:1:3.01:42,3,0	./.	./.	./.	./.	./.	1/1:0,4:1:3.01:42,3,0	./.	1/1:0,4:3:6.02:82,6,0	1/1:0,5:5:15.05:208,15,0	./.	./.	1/1:0,4:3:9.03:124,9,0	./.	1/1:0,2:2:6.02:82,6,0
chr10	61231382	.	TGAA	T	2032.03	PASS	AB=0.619;AC=25;AF=0.781;AN=32;BaseQRankSum=-0.087;DP=343;FS=0.000;HRun=0;HaplotypeScore=18.3191;InbreedingCoeff=0.3877;MQ=13.41;MQ0=243;MQRankSum=-1.130;QD=14.83;ReadPosRankSum=2.099;VQSLOD=2.6593;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,4:2:3.01:48,3,0	./.	./.	./.	./.	0/0:27,0:9:15.02:0,15,285	0/0:12,0:1:3.01:0,3,66	./.	1/1:6,5:5:12.04:193,12,0	1/1:5,1:1:3.01:48,3,0	./.	0/1:5,8:7:32.46:268,0,32	1/1:3,3:3:9.03:145,9,0	1/1:2,8:7:15.05:241,15,0	1/1:9,5:3:9.03:145,9,0	1/1:2,7:6:12.04:193,12,0	1/1:6,1:1:3.01:48,3,0	1/1:6,2:3:3.01:48,3,0	./.	./.	1/1:5,1:1:3.01:48,3,0	0/0:13,0:2:3.01:0,3,66	./.	./.	./.	1/1:9,4:4:12.04:193,12,0	1/1:9,11:12:33.11:530,33,0	./.
chr10	61233242	.	GA	G	7816.20	PASS	AC=54;AF=0.964;AN=56;BaseQRankSum=0.637;DP=212;FS=12.087;HRun=1;HaplotypeScore=142.0600;InbreedingCoeff=0.4525;MQ=54.76;MQ0=0;MQRankSum=-2.953;QD=38.31;ReadPosRankSum=1.900;VQSLOD=2.8343;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,7:7:21.07:283,21,0	1/1:0,3:3:9.03:126,9,0	1/1:0,4:3:9.03:114,9,0	0/0:6,2:5:8.01:0,8,79	1/1:0,11:11:27.09:375,27,0	1/1:0,8:8:21.07:293,21,0	1/1:0,6:6:12.04:167,12,0	1/1:0,12:12:36.12:503,36,0	1/1:0,12:12:36.08:479,36,0	1/1:0,17:17:51.17:710,51,0	1/1:0,7:7:18.06:251,18,0	1/1:0,11:11:30.10:419,30,0	1/1:0,5:5:15.05:208,15,0	1/1:0,6:6:18.06:251,18,0	1/1:0,11:11:30.10:419,30,0	1/1:0,11:11:33.11:456,33,0	1/1:0,6:6:18.06:251,18,0	1/1:0,1:1:3.01:42,3,0	1/1:0,8:8:24.08:335,24,0	1/1:0,12:12:33.11:460,33,0	1/1:0,1:1:3.01:42,3,0	1/1:1,9:10:21.07:293,21,0	1/1:0,7:7:15.05:209,15,0	1/1:0,1:1:3.01:42,3,0	1/1:0,11:11:30.10:419,30,0	1/1:0,4:4:12.04:167,12,0	1/1:0,10:10:30.10:418,30,0	1/1:0,2:2:6.02:84,6,0
chr10	61235080	.	GTC	G	1226.35	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.951;DP=562;FS=1.500;HRun=0;HaplotypeScore=64.9476;InbreedingCoeff=0.9974;MQ=80.63;MQ0=0;MQRankSum=-0.577;QD=42.29;ReadPosRankSum=-4.124;VQSLOD=4.0327;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,111,2238	0/0:15,0:15:45.15:0,45,914	0/0:31,0:31:81.28:0,81,1707	0/0:24,0:24:69.19:0,69,1319	0/0:23,0:23:69.20:0,69,1337	0/0:24,0:24:69.24:0,69,1378	0/0:13,0:13:39.13:0,39,781	1/1:0,29:29:87.24:1321,87,0	0/0:21,0:21:63.22:0,63,1249	0/0:29,0:29:87.30:0,87,1732	0/0:22,0:22:66.23:0,66,1327	0/0:12,0:12:36.12:0,36,731	0/0:18,0:18:54.19:0,54,1079	0/0:18,0:18:54.19:0,54,1095	0/0:17,0:17:51.18:0,51,1025	0/0:18,0:18:54.19:0,54,1096	0/0:15,0:15:45.15:0,45,913	0/0:8,0:8:24.08:0,24,487	0/0:21,0:20:60.21:0,60,1185	0/0:31,0:31:93.32:0,93,1868	0/0:11,0:11:33.10:0,33,634	0/0:14,0:14:42.14:0,42,853	0/0:23,0:23:66.23:0,66,1284	0/0:16,0:16:48.16:0,48,972	0/0:14,0:14:42.14:0,42,844	0/0:23,0:23:69.22:0,69,1321	0/0:18,0:18:54.17:0,54,1060	0/0:15,0:15:45.15:0,45,878
chr10	61236991	.	AT	A	318.16	PASS	AB=0.644;AC=1;AF=0.018;AN=56;BaseQRankSum=3.346;DP=590;FS=0.000;HRun=4;HaplotypeScore=76.6648;InbreedingCoeff=-0.0196;MQ=55.82;MQ0=0;MQRankSum=1.667;QD=10.97;ReadPosRankSum=1.275;VQSLOD=1.0506;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:26:69.19:0,69,941	0/0:10,0:10:30.07:0,30,400	0/0:13,0:11:27.09:0,27,368	0/0:16,0:12:11.34:0,11,356	0/0:33,0:33:99:0,99,1368	0/0:24,0:24:69.22:0,69,947	0/0:14,0:14:39.10:0,39,510	0/0:29,0:29:81.23:0,81,1107	0/0:22,0:22:63.21:0,63,879	0/0:27,0:27:75.25:0,75,1050	0/0:33,0:33:87.27:0,87,1183	0/0:15,0:15:42.13:0,42,572	0/0:19,0:19:54.17:0,54,738	0/0:26,0:26:72.20:0,72,959	0/0:21,0:21:63.21:0,63,880	0/0:17,0:17:51.17:0,51,713	0/1:13,16:29:99:393,0,403	0/0:11,0:11:33.07:0,33,440	0/0:15,0:15:45.15:0,45,627	0/0:37,0:37:99:0,105,1435	0/0:17,0:17:48.15:0,48,656	0/0:18,0:18:54.18:0,54,756	0/0:27,0:27:75.25:0,75,1049	0/0:10,0:10:27.09:0,27,374	0/0:16,0:16:48.15:0,48,654	0/0:16,0:16:48.16:0,48,671	0/0:28,0:27:81.25:0,81,1103	0/0:20,0:20:60.20:0,60,840
chr10	61240202	.	AC	A	754.89	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-0.255;DP=527;FS=13.080;HRun=1;HaplotypeScore=81.8082;InbreedingCoeff=0.9892;MQ=68.45;MQ0=0;MQRankSum=0.298;QD=35.95;ReadPosRankSum=-4.461;VQSLOD=1.0961;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:72.25:0,72,1142	0/0:8,0:8:24.08:0,24,384	0/0:22,0:21:42.06:0,42,878	0/0:6,0:6:18.06:0,18,287	0/0:22,0:22:60.19:0,60,936	0/0:22,0:22:63.21:0,63,1004	0/0:15,0:15:45.15:0,45,719	1/1:5,16:21:63.19:850,63,0	0/0:14,0:14:42.14:0,42,671	0/0:34,0:34:99:0,102,1584	0/0:23,0:23:66.22:0,66,1028	0/0:11,0:11:33.11:0,33,521	0/0:16,0:16:45.14:0,45,695	0/0:21,0:21:60.20:0,60,949	0/0:17,0:17:48.16:0,48,767	0/0:12,0:12:33.09:0,33,503	0/0:27,0:27:81.28:0,81,1289	0/0:16,0:16:48.16:0,48,762	0/0:25,0:25:75.26:0,75,1198	0/0:26,0:26:78.25:0,78,1223	0/0:14,0:14:42.14:0,42,671	0/0:18,0:18:51.16:0,51,790	0/0:20,0:20:48.15:0,48,744	0/0:20,0:20:54.14:0,54,813	0/0:11,0:11:33.11:0,33,527	0/0:19,0:19:57.19:0,57,890	0/0:26,0:26:75.24:0,75,1163	0/0:15,0:15:45.15:0,45,719
chr10	61240250	.	A	AC	18627.04	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-5.252;DP=521;FS=0.872;HRun=0;HaplotypeScore=61.3471;InbreedingCoeff=0.9864;MQ=71.56;MQ0=0;MQRankSum=-7.419;QD=37.03;ReadPosRankSum=5.429;VQSLOD=4.5730;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,24:24:60.20:877,60,0	1/1:0,6:6:15.05:219,15,0	0/0:10,0:10:28.84:0,29,315	0/0:8,0:8:23.78:0,24,262	1/1:1,21:22:51:691,51,0	1/1:1,20:21:51.17:745,51,0	1/1:0,7:7:21.07:307,21,0	1/1:3,2:33:53.95:536,54,0	1/1:0,12:12:36.11:508,36,0	1/1:0,26:26:78.22:1083,78,0	1/1:0,22:22:63.21:916,63,0	1/1:0,10:10:24.08:351,24,0	1/1:0,20:20:45.15:658,45,0	1/1:0,24:24:66.22:964,66,0	1/1:1,16:17:39.13:570,39,0	1/1:0,14:14:33.11:483,33,0	1/1:0,29:29:81.27:1185,81,0	1/1:0,15:15:42.14:613,42,0	1/1:2,27:29:81.12:1096,81,0	1/1:0,33:33:96.24:1370,96,0	1/1:0,12:12:30.10:439,30,0	1/1:0,17:17:44.98:604,45,0	1/1:0,21:21:54.18:788,54,0	1/1:0,12:12:30.10:439,30,0	1/1:0,12:12:33.11:483,33,0	1/1:2,20:22:60.19:859,60,0	1/1:0,29:29:84.28:1227,84,0	1/1:0,14:14:42.14:614,42,0
chr10	61241417	.	TC	T	4720.22	PASS	AB=0.556;AC=39;AF=0.780;AN=50;BaseQRankSum=5.291;DP=506;FS=6.971;HRun=1;HaplotypeScore=49.3505;InbreedingCoeff=0.7493;MQ=30.36;MQ0=105;MQRankSum=-3.980;QD=14.57;ReadPosRankSum=0.973;VQSLOD=3.9819;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,22:12:21.07:272,21,0	1/1:0,5:3:6.02:77,6,0	./.	./.	1/1:1,19:10:12:137,12,0	0/0:20,0:12:21.07:0,21,307	0/0:23,0:10:18.06:0,18,286	./.	1/1:1,22:14:24.08:311,24,0	0/1:4,16:17:2.85:479,0,3	1/1:2,13:11:15.05:189,15,0	1/1:2,14:12:27.09:348,27,0	1/1:2,17:9:21.07:270,21,0	1/1:2,19:11:33.06:407,33,0	1/1:0,11:8:21.03:253,21,0	1/1:0,12:7:15.05:194,15,0	1/1:3,11:8:0.06:176,0,0	1/1:2,6:5:3.01:39,3,0	1/1:5,10:5:12.04:156,12,0	1/1:0,19:12:12.04:155,12,0	1/1:3,13:6:8.99:98,9,0	0/0:23,0:19:18.06:0,18,287	0/0:22,0:19:33.11:0,33,525	0/0:37,0:29:36.12:0,36,574	1/1:0,18:12:20.98:250,21,0	1/1:1,25:13:39.13:501,39,0	1/1:0,20:15:27.05:331,27,0	1/1:0,4:2:6.02:78,6,0
chr10	61243334	.	AC	A	1562.69	PASS	AB=0.865;AC=33;AF=0.917;AN=36;BaseQRankSum=1.086;DP=512;FS=0.000;HRun=3;HaplotypeScore=23.3440;InbreedingCoeff=0.1744;MQ=13.23;MQ0=351;MQRankSum=0.186;QD=4.13;ReadPosRankSum=0.776;VQSLOD=0.2404;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:29,9:5:6.02:74,6,0	1/1:5,11:4:5.95:55,6,0	./.	./.	1/1:3,11:1:3.01:37,3,0	./.	./.	0/0:30,0:4:9.03:0,9,129	1/1:11,3:1:3.01:37,3,0	1/1:12,8:3:8.99:94,9,0	./.	1/1:10,2:3:3.01:37,3,0	1/1:8,8:6:6.02:74,6,0	1/1:9,13:12:18.06:223,18,0	1/1:7,9:7:15.05:186,15,0	1/1:7,7:5:6.02:74,6,0	1/1:22,3:2:2.97:20,3,0	0/1:27,5:5:71.15:96,0,71	./.	1/1:28,17:10:15.05:185,15,0	1/1:16,6:4:6.02:74,6,0	./.	./.	./.	1/1:6,11:1:3.01:37,3,0	1/1:12,12:6:15.04:174,15,0	1/1:16,15:11:15.05:185,15,0	./.
chr10	61244737	.	A	AT	178.76	PASS	AC=4;AF=0.083;AN=48;BaseQRankSum=-1.546;DP=414;FS=6.530;HRun=0;HaplotypeScore=29.0685;InbreedingCoeff=0.7779;MQ=41.82;MQ0=29;MQRankSum=-3.244;QD=14.90;ReadPosRankSum=0.765;VQSLOD=4.2361;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:22:45.15:0,45,629	0/0:13,0:13:30.01:0,30,374	./.	0/0:8,0:1:3.01:0,3,42	0/0:24,0:20:48.12:0,48,648	1/1:2,7:6:15.05:235,15,0	./.	0/0:28,0:4:11.99:0,12,130	0/0:16,0:16:33.11:0,33,461	0/0:17,0:14:36.11:0,36,474	0/0:18,0:13:27.09:0,27,378	0/0:9,0:8:21.07:0,21,293	0/0:13,0:13:21.07:0,21,293	0/0:15,0:13:21.06:0,21,277	0/0:21,0:17:33.11:0,33,461	0/0:7,0:7:21.07:0,21,290	0/0:22,0:20:30.10:0,30,419	0/0:17,0:15:18.03:0,18,232	0/0:18,0:7:21.07:0,21,294	0/0:35,0:29:69.23:0,69,964	0/0:12,0:12:18.06:0,18,252	1/1:1,2:2:3.01:47,3,0	./.	./.	0/0:13,0:11:30.07:0,30,399	0/0:14,0:14:42.10:0,42,550	0/0:26,0:23:63.21:0,63,879	0/0:10,0:10:27.09:0,27,378
chr10	61245361	.	T	TA	3968.70	PASS	AC=38;AF=1.000;AN=38;DP=238;FS=0.000;HRun=0;HaplotypeScore=29.7223;InbreedingCoeff=-0.0630;MQ=18.97;MQ0=97;QD=26.82;VQSLOD=3.6828;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,4:4:12.04:174,12,0	1/1:1,6:4:12.04:175,12,0	./.	./.	1/1:1,11:4:9.03:133,9,0	1/1:0,7:5:15.05:218,15,0	./.	./.	1/1:1,3:2:6.02:88,6,0	1/1:0,3:2:6.02:89,6,0	1/1:0,10:8:24.08:351,24,0	./.	1/1:0,4:3:9.03:131,9,0	1/1:0,7:4:12.04:174,12,0	1/1:0,8:8:24.08:348,24,0	1/1:0,6:3:9.03:131,9,0	./.	./.	1/1:1,1:1:3.01:44,3,0	1/1:0,29:25:75.25:1098,75,0	./.	1/1:1,7:4:11.95:147,12,0	1/1:0,7:6:18.06:272,18,0	./.	1/1:0,5:5:15.05:221,15,0	1/1:1,3:1:3.01:45,3,0	1/1:1,6:1:3.01:44,3,0	1/1:0,2:2:6.02:87,6,0
chr10	61246934	.	GA	G	4047.42	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=6.409;DP=210;FS=0.000;HRun=3;HaplotypeScore=52.3400;InbreedingCoeff=0.8242;MQ=49.47;MQ0=7;MQRankSum=1.592;QD=28.11;ReadPosRankSum=2.698;VQSLOD=2.7063;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,16:16:42.12:477,42,0	1/1:1,2:3:6.02:68,6,0	0/0:5,0:2:6.02:0,6,90	0/0:9,0:2:6.02:0,6,90	1/1:0,9:9:21.06:238,21,0	0/0:9,0:9:24.08:0,24,359	0/0:9,0:9:27.09:0,27,404	0/0:14,0:13:33.04:0,33,446	1/1:0,7:7:21.06:239,21,0	1/1:0,3:3:9.03:103,9,0	1/1:2,8:9:15.04:170,15,0	1/1:0,5:5:15.04:171,15,0	1/1:1,7:8:21.05:232,21,0	1/1:0,4:4:12.03:137,12,0	1/1:0,6:6:18.05:205,18,0	1/1:0,4:4:9.03:103,9,0	1/1:0,6:6:12.03:137,12,0	1/1:0,2:2:6.02:68,6,0	1/1:1,5:5:15.04:171,15,0	1/1:0,12:12:36.10:407,36,0	1/1:2,14:15:33.09:377,33,0	0/0:7,0:7:15.05:0,15,224	0/0:8,0:7:18.06:0,18,269	0/0:5,0:5:6.02:0,6,90	1/1:1,1:2:3.01:34,3,0	1/1:1,12:13:36.10:403,36,0	1/1:1,7:8:21.06:237,21,0	1/1:1,3:4:6.02:68,6,0
chr10	61247010	.	T	TA	1378.33	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-2.751;DP=373;FS=3.421;HRun=7;HaplotypeScore=65.9501;InbreedingCoeff=0.9771;MQ=65.36;MQ0=3;MQRankSum=0.559;QD=25.52;ReadPosRankSum=1.100;VQSLOD=4.3870;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:72.05:0,72,683	0/0:9,0:9:24.04:0,24,232	0/0:16,0:12:29.24:0,29,307	0/0:9,0:8:15.02:0,15,145	0/0:20,0:20:51.06:0,51,487	1/1:2,8:10:21.06:253,21,0	1/1:2,7:9:21.06:254,21,0	0/0:28,0:28:75.09:0,75,712	0/0:7,0:7:21.03:0,21,203	0/0:12,0:12:33.05:0,33,319	0/0:11,0:11:30.04:0,30,286	0/0:9,0:9:24.03:0,24,227	0/0:7,0:7:12.02:0,12,116	0/0:13,0:13:36.04:0,36,341	0/0:10,0:10:30.05:0,30,289	0/0:9,0:9:24.03:0,24,232	0/0:14,0:14:32.09:0,32,317	0/0:8,0:8:21.03:0,21,203	0/0:23,0:20:51:0,51,468	0/0:23,0:23:54.08:0,54,521	0/0:11,0:11:24.03:0,24,231	1/1:0,11:11:33.10:398,33,0	1/1:1,16:17:39.12:471,39,0	1/1:0,6:7:15.04:175,15,0	0/0:7,0:7:18.02:0,18,174	0/0:12,0:12:27.04:0,27,261	0/0:15,0:14:45.07:0,45,434	0/0:19,0:19:54.09:0,54,521
chr10	61247389	.	C	CTTTT	15965.22	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-1.540;DP=526;FS=16.338;HRun=10;HaplotypeScore=163.8309;InbreedingCoeff=0.8340;MQ=68.03;MQ0=2;MQRankSum=-6.144;QD=33.05;ReadPosRankSum=3.083;VQSLOD=1.8140;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,2:11:17.98:299,18,0	1/1:3,7:10:18.06:423,18,0	0/0:21,0:20:23.71:0,24,355	0/0:20,0:16:7.55:0,8,114	1/1:14,0:31:51.17:907,51,0	1/1:4,0:19:30.06:535,30,0	1/1:20,0:20:30.33:330,30,0	1/1:8,0:20:12.27:249,12,0	1/1:9,0:19:27.09:508,27,0	1/1:11,13:27:55.03:1102,55,0	1/1:10,13:26:47.93:852,48,0	1/1:3,3:7:9.03:178,9,0	1/1:2,8:13:24.51:449,25,0	1/1:1,6:9:16.48:387,16,0	1/1:5,8:14:24.08:531,24,0	1/1:3,5:10:24.08:518,24,0	1/1:5,4:14:30.01:519,30,0	1/1:10,1:13:21.78:287,22,0	1/1:12,8:22:33.09:578,33,0	1/1:6,16:31:78.13:1319,78,0	1/1:4,4:9:9.03:113,9,0	1/1:2,0:13:23.67:410,24,0	1/1:12,0:29:51.13:872,51,0	1/1:4,0:9:7.38:111,7,0	1/1:3,17:25:54.14:1052,54,0	1/1:8,20:32:78.27:1593,78,0	1/1:18,9:30:65.16:1186,65,0	1/1:8,7:19:33.03:657,33,0
chr10	61247885	.	G	GT	21910.24	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-7.743;DP=575;FS=2.196;HRun=1;HaplotypeScore=51.6020;InbreedingCoeff=0.9950;MQ=69.75;MQ0=1;MQRankSum=-4.619;QD=41.11;ReadPosRankSum=5.706;VQSLOD=4.8287;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,32:33:90.30:1348,90,0	1/1:0,7:7:21.07:315,21,0	0/0:19,0:18:51.15:0,51,644	0/0:23,0:22:56.40:0,56,708	1/1:1,32:33:96.23:1369,96,0	1/1:0,26:26:78.26:1169,78,0	1/1:1,15:16:39:584,39,0	1/1:2,30:30:81.27:1164,81,0	1/1:0,24:24:69.23:1034,69,0	1/1:1,29:30:87.27:1282,87,0	1/1:0,31:31:90.30:1349,90,0	1/1:0,15:15:42.14:630,42,0	1/1:0,14:14:39.13:585,39,0	1/1:0,17:17:45.15:675,45,0	1/1:0,15:15:39.13:585,39,0	1/1:0,8:8:21.07:315,21,0	1/1:1,20:21:34.95:745,35,0	1/1:0,17:17:48.16:719,48,0	1/1:3,17:20:60.17:873,60,0	1/1:0,26:26:75.25:1124,75,0	1/1:1,17:18:45.15:675,45,0	1/1:0,21:21:60.16:874,60,0	1/1:1,19:20:54.18:809,54,0	1/1:0,17:17:48.16:719,48,0	1/1:1,10:11:27.09:405,27,0	1/1:0,17:17:51.17:765,51,0	1/1:1,31:31:87.29:1304,87,0	1/1:1,11:12:33.11:495,33,0
chr10	61248435	.	TC	T	20947.11	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=3.233;DP=629;FS=5.472;HRun=1;HaplotypeScore=108.6779;InbreedingCoeff=0.9774;MQ=92.27;MQ0=0;MQRankSum=-9.852;QD=38.36;ReadPosRankSum=8.561;VQSLOD=3.6076;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,17:17:42.14:587,42,0	1/1:0,12:12:36.07:480,36,0	0/0:28,0:28:84.28:0,84,1321	0/0:24,0:24:72.13:0,72,995	1/1:0,30:30:90.27:1237,90,0	1/1:0,25:25:72.24:1007,72,0	1/1:0,14:14:42.14:587,42,0	0/0:31,0:31:90.28:0,90,1374	1/1:0,25:25:72.24:1003,72,0	1/1:0,30:30:87.29:1216,87,0	1/1:0,21:21:57.15:775,57,0	1/1:0,23:23:63.21:881,63,0	1/1:0,25:25:72.24:1004,72,0	1/1:0,20:20:48.16:671,48,0	1/1:0,23:23:63.17:859,63,0	1/1:0,29:29:72.24:1007,72,0	1/1:0,7:7:21.07:294,21,0	1/1:0,3:3:9.03:126,9,0	1/1:0,21:21:60.18:806,60,0	1/1:0,43:43:99:1593,117,0	1/1:0,23:23:66.22:923,66,0	1/1:0,18:18:51.08:669,51,0	1/1:0,23:23:69.19:942,69,0	1/1:0,21:21:57.19:797,57,0	1/1:0,22:22:54.18:755,54,0	1/1:0,30:30:90.30:1259,90,0	1/1:0,29:29:81.27:1133,81,0	1/1:0,12:12:24.08:336,24,0
chr10	61250204	.	A	AGCAGAGC	1445.45	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.392;DP=596;FS=0.997;HRun=0;HaplotypeScore=136.3211;InbreedingCoeff=0.9988;MQ=90.64;MQ0=0;MQRankSum=-3.290;QD=85.03;ReadPosRankSum=-2.374;VQSLOD=3.9153;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:33.11:0,33,844	0/0:10,0:10:30.10:0,30,803	0/0:25,0:25:63.16:0,63,1491	0/0:23,0:23:66.23:0,66,1682	0/0:31,0:31:90.31:0,90,2517	0/0:20,0:20:60.21:0,60,1649	0/0:13,0:13:39.13:0,39,1091	1/1:2,11:17:44.45:1540,44,0	0/0:28,0:28:81.26:0,81,2180	0/0:32,0:32:93.32:0,93,2599	0/0:29,0:29:84.29:0,84,2349	0/0:13,0:13:39.13:0,39,1088	0/0:25,0:25:75.26:0,75,2095	0/0:15,0:15:45.15:0,45,1251	0/0:15,0:15:45.15:0,45,1259	0/0:22,0:22:66.21:0,66,1787	0/0:13,0:13:39.13:0,39,1047	0/0:13,0:13:39.13:0,39,969	0/0:26,0:26:78.27:0,78,2182	0/0:36,0:36:99:0,108,2968	0/0:19,0:19:54.17:0,54,1441	0/0:23,0:23:69.23:0,69,1872	0/0:32,0:32:96.33:0,96,2636	0/0:13,0:13:39.13:0,39,1079	0/0:14,0:14:42.14:0,42,1164	0/0:24,0:24:69.24:0,69,1927	0/0:25,0:25:75.26:0,75,2087	0/0:29,0:29:85.17:0,85,2335
chr10	61252957	.	CGCT	C	2201.75	PASS	AB=1.000;AC=31;AF=0.738;AN=42;BaseQRankSum=0.965;DP=307;FS=7.316;HRun=0;HaplotypeScore=59.1934;InbreedingCoeff=0.4130;MQ=67.11;MQ0=10;MQRankSum=3.029;QD=10.15;ReadPosRankSum=4.623;VQSLOD=1.5424;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:12,0:12:0:0,0,0	0/1:2,0:2:0:0,0,0	0/0:24,0:17:3.01:0,3,32	./.	./.	1/1:10,1:11:2.29:33,2,0	1/1:12,9:21:39:406,39,0	0/0:12,0:12:5.97:0,6,60	1/1:7,1:7:9.03:123,9,0	1/1:8,0:7:2.32:40,2,0	./.	1/1:10,1:11:15.05:204,15,0	1/1:5,1:5:9.01:106,9,0	1/1:10,3:14:23.97:272,24,0	1/1:3,7:10:2.58:41,3,0	1/1:4,0:4:3.01:42,3,0	1/1:9,10:19:30.06:407,30,0	1/1:15,2:17:12.04:164,12,0	0/1:11,0:10:10.90:13,0,11	0/0:5,0:4:2.88:0,3,15	1/1:35,0:34:5.73:50,6,0	./.	./.	1/1:7,14:21:20.18:250,20,0	./.	0/0:5,0:5:0:0,0,0	1/1:5,2:7:12.04:164,12,0	./.
chr10	61252984	.	TGCC	T	855.60	PASS	AB=1.000;AC=25;AF=0.543;AN=46;BaseQRankSum=1.041;DP=276;FS=2.069;HRun=0;HaplotypeScore=74.9379;InbreedingCoeff=0.1953;MQ=38.15;MQ0=21;MQRankSum=2.036;QD=3.85;ReadPosRankSum=3.935;VQSLOD=1.3888;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:6:2.97:0,3,20	0/1:2,0:2:0:0,0,0	0/1:14,0:2:1.18:1,0,33	./.	./.	0/1:12,0:12:12.57:13,0,14	1/1:22,0:22:21.73:152,22,0	0/1:8,0:7:4.17:4,0,100	1/1:7,0:6:13.16:68,13,0	1/1:3,5:7:4.65:20,5,0	./.	1/1:13,0:13:7.04:83,7,0	0/1:7,0:7:2.41:34,0,2	1/1:17,0:17:18.93:103,19,0	0/1:9,0:9:12.36:16,0,12	1/1:2,0:2:2.74:15,3,0	0/1:21,0:21:17.28:162,0,17	0/1:23,0:23:16.88:58,0,17	0/0:10,0:7:7.87:0,8,57	0/0:3,0:3:0.79:0,1,12	0/1:29,0:25:0.36:1,0,0	./.	0/0:2,0:2:2.80:0,3,13	1/1:16,1:17:18.94:157,19,0	0/0:3,0:2:0:0,0,0	0/0:5,0:5:6.24:0,6,33	1/1:11,0:11:17.11:105,17,0	./.
chr10	61253013	.	C	CTGT	567.60	PASS	AB=1.000;AC=12;AF=0.250;AN=48;BaseQRankSum=0.043;DP=248;FS=16.297;HRun=0;HaplotypeScore=62.2993;InbreedingCoeff=0.3260;MQ=40.23;MQ0=22;MQRankSum=-1.285;QD=6.68;ReadPosRankSum=-0.062;VQSLOD=0.3820;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:3:2.66:0,3,24	0/0:2,0:2:2.98:0,3,25	0/0:11,0:1:0:0,0,0	0/0:21,0:6:14.88:0,15,108	./.	1/1:2,10:12:0.47:1,0,0	1/1:4,19:24:23.87:338,24,0	0/0:5,0:3:2.98:0,3,21	0/1:10,0:9:20.96:21,0,47	./.	0/0:2,0:1:2.22:0,2,7	0/0:12,0:12:9.56:0,10,69	0/1:7,0:7:3.81:19,0,4	0/1:11,0:11:12.77:13,0,29	0/0:6,0:6:5.74:0,6,63	0/0:3,0:3:2.02:0,2,16	0/0:19,0:19:30.86:0,31,213	0/0:25,0:25:28.01:0,28,191	0/0:8,0:4:6.69:0,7,49	0/0:4,0:2:0:0,0,0	0/0:17,0:11:6.46:0,6,51	1/1:3,0:3:2.96:25,3,0	0/1:1,0:1:0:0,0,0	1/1:14,3:17:21.34:277,21,0	./.	0/0:5,0:2:2.97:0,3,20	0/0:10,0:9:8.89:0,9,62	./.
chr10	61253664	.	TATAA	T	29021.18	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=3.657;DP=718;FS=5.751;HRun=0;HaplotypeScore=139.6094;InbreedingCoeff=0.9581;MQ=61.89;MQ0=8;MQRankSum=-1.434;QD=44.58;ReadPosRankSum=7.761;VQSLOD=4.4897;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:0,21:21:54.14:989,54,0	1/1:0,7:6:9.03:174,9,0	0/0:23,0:23:68.77:0,69,1503	0/0:13,0:12:9.10:0,9,342	1/1:0,29:29:75.21:1370,75,0	1/1:2,31:33:75.26:1435,75,0	1/1:1,19:18:36.08:639,36,0	0/0:30,0:30:81.25:0,81,2053	1/1:1,22:23:51.17:988,51,0	1/1:2,46:48:99:2622,138,0	1/1:3,26:29:72.25:1374,72,0	1/1:2,23:24:51.17:989,51,0	1/1:0,16:16:36.12:697,36,0	1/1:3,22:25:54.19:1047,54,0	1/1:3,18:21:51.17:922,51,0	1/1:0,15:15:39.13:756,39,0	1/1:3,22:24:36.07:1025,36,0	1/1:4,23:27:25.61:1100,26,0	1/1:1,14:15:42.13:768,42,0	1/1:1,43:44:99:2107,114,0	1/1:1,20:20:42.06:738,42,0	1/1:2,38:39:90.26:1685,90,0	1/1:3,33:34:74.95:1377,75,0	1/1:0,27:27:47.57:929,48,0	1/1:0,18:18:48.16:930,48,0	1/1:3,27:30:81.28:1569,81,0	1/1:2,29:31:81.28:1569,81,0	1/1:0,24:24:63.22:1221,63,0
chr10	61254719	.	CA	C	1426.85	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.696;DP=481;FS=6.048;HRun=3;HaplotypeScore=44.1444;InbreedingCoeff=0.9758;MQ=80.03;MQ0=0;MQRankSum=0.312;QD=32.43;ReadPosRankSum=-4.068;VQSLOD=1.6432;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:57.15:0,57,780	0/0:7,0:7:21.07:0,21,302	0/0:14,0:14:42.04:0,42,528	0/0:14,0:14:39.10:0,39,527	0/0:29,0:29:81.20:0,81,1090	0/0:24,0:24:69.23:0,69,991	0/0:14,0:14:42.14:0,42,604	1/1:1,43:44:99:1522,126,0	0/0:12,0:12:36.12:0,36,518	0/0:9,0:9:27.08:0,27,374	0/0:18,0:18:48.14:0,48,652	0/0:15,0:15:39.12:0,39,542	0/0:16,0:16:48.14:0,48,655	0/0:10,0:10:30.10:0,30,432	0/0:16,0:16:48.16:0,48,691	0/0:9,0:9:24.08:0,24,346	0/0:12,0:12:33.11:0,33,473	0/0:8,0:8:15.05:0,15,210	0/0:17,0:17:48.10:0,48,632	0/0:23,0:23:63.12:0,63,850	0/0:13,0:13:39.13:0,39,558	0/0:11,0:11:30.09:0,30,415	0/0:14,0:14:42.12:0,42,571	0/0:12,0:12:33.11:0,33,475	0/0:21,0:21:60.20:0,60,861	0/0:22,0:22:60.18:0,60,830	0/0:26,0:26:78.26:0,78,1123	0/0:29,0:29:87.29:0,87,1248
chr10	61254921	.	TA	T	1480.34	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=0.155;DP=590;FS=2.901;HRun=2;HaplotypeScore=67.2657;InbreedingCoeff=0.9981;MQ=85.93;MQ0=0;MQRankSum=3.135;QD=36.11;ReadPosRankSum=-4.407;VQSLOD=2.3183;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:81.13:0,81,1106	0/0:18,0:18:54.18:0,54,809	0/0:29,0:29:84.28:0,84,1235	0/0:18,0:18:51.17:0,51,730	0/0:24,0:24:69.19:0,69,1008	0/0:32,0:32:90.29:0,90,1328	0/0:12,0:12:27.09:0,27,405	1/1:0,41:41:99:1575,123,0	0/0:20,0:20:57.19:0,57,854	0/0:22,0:22:60.19:0,60,879	0/0:36,0:36:96.27:0,96,1375	0/0:15,0:15:39.13:0,39,584	0/0:16,0:16:45.15:0,45,673	0/0:12,0:12:33.11:0,33,490	0/0:17,0:17:45.15:0,45,668	0/0:12,0:12:33.11:0,33,494	0/0:18,0:18:54.18:0,54,809	0/0:14,0:14:42.14:0,42,622	0/0:19,0:19:57.19:0,57,855	0/0:22,0:22:66.22:0,66,983	0/0:15,0:15:45.15:0,45,669	0/0:14,0:14:36.08:0,36,496	0/0:19,0:19:54.15:0,54,780	0/0:16,0:16:45.15:0,45,674	0/0:13,0:13:36.12:0,36,539	0/0:27,0:27:81.27:0,81,1209	0/0:33,0:33:96.31:0,96,1418	0/0:28,0:28:81.27:0,81,1214
chr10	61255982	.	ATTG	A	3857.40	PASS	AB=0.939;AC=39;AF=0.696;AN=56;BaseQRankSum=-4.663;DP=468;FS=1.004;HRun=0;HaplotypeScore=134.6405;InbreedingCoeff=0.0358;MQ=67.17;MQ0=3;MQRankSum=1.696;QD=9.97;ReadPosRankSum=3.433;VQSLOD=3.0501;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:14,5:19:11.20:221,0,11	1/1:1,5:6:10.24:146,10,0	0/0:33,0:24:33.05:0,33,514	0/0:20,0:17:27.21:0,27,547	1/1:23,0:23:4.50:324,5,0	1/1:15,0:15:11.91:100,12,0	1/1:15,0:15:18.05:208,18,0	0/0:28,0:27:54.11:0,54,872	0/1:21,1:22:43.54:172,0,44	1/1:16,0:16:12.44:250,12,0	0/1:12,2:14:10.49:43,0,10	0/1:13,0:13:17.64:143,0,18	0/1:16,1:17:80.01:146,0,80	0/1:15,0:15:17.47:42,0,17	0/1:17,0:17:19.98:122,0,20	1/1:11,1:12:2.69:122,3,0	1/1:12,1:13:9.45:156,9,0	1/1:12,1:13:2.85:166,3,0	1/1:20,4:24:14.21:278,14,0	1/1:20,3:23:5.89:351,6,0	1/1:14,0:14:9.88:152,10,0	1/1:11,0:11:11.88:98,12,0	1/1:20,0:20:14.34:152,14,0	0/1:12,0:12:5.65:55,0,6	0/1:10,1:11:8.91:63,0,9	1/1:12,1:13:11.88:169,12,0	0/1:18,0:18:1.01:107,0,1	0/1:9,2:11:7.75:72,0,8
chr10	61255992	.	T	TTG	5582.26	PASS	AB=0.870;AC=34;AF=0.607;AN=56;BaseQRankSum=6.289;DP=464;FS=0.000;HRun=0;HaplotypeScore=131.8399;InbreedingCoeff=0.5045;MQ=57.24;MQ0=5;MQRankSum=-2.906;QD=17.95;ReadPosRankSum=4.358;VQSLOD=5.0699;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:18,2:20:82.65:100,0,83	0/1:5,1:6:6.31:42,0,6	0/0:30,0:21:44.94:0,45,590	0/0:25,0:20:44.19:0,44,620	1/1:18,4:22:8.99:106,9,0	0/0:16,0:16:10.96:0,11,63	0/0:17,0:17:11.76:0,12,37	0/0:26,0:25:60.22:0,60,778	1/1:15,9:24:40.52:517,41,0	0/1:11,5:16:2.74:315,0,3	0/1:9,3:12:25.22:202,0,25	1/1:7,7:14:29.59:398,30,0	1/1:8,10:18:41.80:360,42,0	1/1:8,6:14:35.60:448,36,0	1/1:12,5:17:34.72:425,35,0	1/1:8,6:14:17.42:331,17,0	0/1:15,1:16:84.01:141,0,84	1/1:9,4:13:0.96:192,1,0	1/1:16,8:24:8.45:438,8,0	0/1:19,1:20:30.08:139,0,30	1/1:9,3:12:14.41:145,14,0	0/0:8,0:8:10.97:0,11,65	0/0:18,0:17:11.10:0,11,50	0/0:13,0:13:10.98:0,11,68	1/1:6,3:9:15.56:177,16,0	1/1:11,5:16:32.62:374,33,0	1/1:11,6:17:38.65:522,39,0	1/1:3,4:7:15.62:211,16,0
chr10	61255994	.	GTTGTGT	G	2771.58	PASS	AB=0.978;AC=27;AF=0.482;AN=56;BaseQRankSum=-8.447;DP=463;FS=7.385;HRun=0;HaplotypeScore=166.2505;InbreedingCoeff=-0.3560;MQ=50.98;MQ0=5;MQRankSum=3.547;QD=7.68;ReadPosRankSum=-1.649;VQSLOD=1.6806;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:21,0:21:99:164,0,235	0/1:6,0:6:25.63:134,0,26	0/0:28,0:18:36.13:0,36,821	0/0:24,0:19:44.61:0,45,826	0/1:22,0:22:99:178,0,297	1/1:0,14:14:12.04:266,12,0	1/1:0,17:17:18.06:249,18,0	0/0:25,0:24:3.24:0,3,746	0/1:23,0:23:59.77:60,0,578	0/1:16,0:16:99:198,0,231	0/0:11,0:11:12.61:0,13,353	0/1:15,0:15:80.53:81,0,366	0/1:18,0:18:81.08:81,0,532	0/0:14,0:14:20.38:0,20,409	0/1:17,0:17:66.57:67,0,334	0/1:14,0:14:42.01:42,0,313	0/1:17,0:17:99:110,0,144	0/1:15,0:15:99:108,0,198	0/1:24,0:24:99:133,0,373	0/1:20,0:20:99:236,0,246	0/1:12,0:12:73.85:74,0,223	1/1:0,8:8:14.96:257,15,0	1/1:1,16:16:14.58:193,15,0	0/1:4,10:14:0.12:138,0,0	0/1:8,0:8:14.62:15,0,198	0/1:17,0:17:19.44:19,0,300	0/1:18,0:18:75.61:76,0,336	0/1:8,0:8:63.63:64,0,196
chr10	61255995	.	TTG	T	2654.15	PASS	AB=0.918;AC=35;AF=0.625;AN=56;BaseQRankSum=7.434;DP=457;FS=3.184;HRun=0;HaplotypeScore=136.2320;InbreedingCoeff=-0.1964;MQ=50.52;MQ0=5;MQRankSum=-2.473;QD=6.55;ReadPosRankSum=0.164;VQSLOD=3.5273;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:18,2:20:99:147,0,109	0/1:6,0:6:1.58:6,0,2	0/0:28,0:17:42.13:0,42,565	0/0:23,1:19:44.33:0,44,618	0/1:18,4:22:32.73:116,0,33	1/1:14,0:14:8.79:36,9,0	0/1:17,0:17:3.03:3,0,7	0/1:26,0:25:2.34:2,0,515	0/1:21,1:23:41.90:227,0,42	1/1:16,1:17:0.03:127,0,0	0/1:11,1:12:50.47:50,0,55	1/1:14,1:15:10.05:129,10,0	0/1:15,3:18:66.84:92,0,67	1/1:11,2:13:19.60:191,20,0	1/1:10,5:15:18.64:143,19,0	0/1:11,3:14:15.15:83,0,15	0/1:13,3:16:75.65:159,0,76	0/1:14,1:15:12.98:79,0,13	0/1:22,1:23:6.90:206,0,7	0/1:16,4:20:64.30:115,0,64	0/1:11,1:12:19.62:50,0,20	0/1:8,0:8:11.80:21,0,12	0/1:17,0:16:3.61:4,0,24	1/1:12,0:12:11.70:98,12,0	0/1:6,2:8:19.07:110,0,19	1/1:13,3:16:14.53:287,15,0	1/1:15,3:18:32.49:287,32,0	1/1:8,0:8:9.10:47,9,0
chr10	61255997	.	G	GT	5618.93	PASS	AB=0.840;AC=36;AF=0.643;AN=56;BaseQRankSum=6.542;DP=470;FS=6.814;HRun=2;HaplotypeScore=125.4976;InbreedingCoeff=0.4701;MQ=50.40;MQ0=6;MQRankSum=-0.877;QD=16.87;ReadPosRankSum=3.193;VQSLOD=4.9682;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:17,3:21:39.22:188,0,39	1/1:6,1:7:1.74:57,2,0	0/0:32,0:19:45.13:0,45,561	0/0:25,0:20:49.81:0,50,655	1/1:19,4:23:23.91:190,24,0	0/0:14,0:14:10.04:0,10,41	0/0:17,0:17:8.73:0,9,25	0/0:15,0:23:1.89:0,2,545	1/1:13,10:23:50.11:516,50,0	1/1:12,5:17:6.43:319,6,0	0/1:9,3:12:16.57:173,0,17	1/1:7,8:15:34.43:381,34,0	1/1:8,10:18:30.90:277,31,0	1/1:5,8:13:37.35:412,37,0	1/1:10,5:15:34.67:345,35,0	1/1:8,6:14:25.07:308,25,0	0/1:14,3:17:99:154,0,112	1/1:10,6:16:19.65:255,20,0	0/1:16,9:25:1.07:453,0,1	0/1:21,1:22:14.31:123,0,14	1/1:8,4:12:17.47:120,17,0	0/0:8,0:8:10.64:0,11,49	0/0:17,0:16:9.01:0,9,40	0/1:10,2:12:3.88:73,0,4	1/1:5,3:8:15.64:150,16,0	1/1:12,5:17:42.65:435,43,0	1/1:11,7:18:40.36:484,40,0	1/1:4,4:8:20.52:207,21,0
chr10	61256560	.	G	GTGATTGAT	4078.53	PASS	AB=1.000;AC=32;AF=0.571;AN=56;BaseQRankSum=-4.216;DP=596;FS=0.429;HRun=0;HaplotypeScore=189.5443;InbreedingCoeff=-0.1969;MQ=67.35;MQ0=1;MQRankSum=0.585;QD=8.57;ReadPosRankSum=3.917;VQSLOD=2.4570;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:27:59.13:600,59,0	0/1:11,0:11:9.93:10,0,177	0/0:34,0:24:5.16:0,5,81	0/0:35,0:32:8.66:0,9,171	1/1:29,0:29:47.89:469,48,0	1/1:7,17:30:27.09:1013,27,0	1/1:13,0:13:20.95:444,21,0	0/0:26,0:26:29.01:0,29,244	0/1:13,0:13:80.79:81,0,226	0/1:34,0:34:40.77:41,0,822	0/1:21,0:21:71.94:72,0,262	0/1:16,0:16:23.90:24,0,380	0/1:25,0:25:99:107,0,485	0/1:9,0:9:0.92:1,0,350	0/1:20,0:20:59.85:60,0,521	0/1:14,0:14:4:4,0,343	0/1:15,0:15:50.88:51,0,290	1/1:5,0:5:8.97:79,9,0	0/1:20,0:20:70.89:71,0,274	0/1:27,0:27:38.02:38,0,598	0/1:13,0:13:12.82:13,0,533	1/1:4,5:11:9.01:224,9,0	1/1:12,11:26:9.03:305,9,0	1/1:6,13:19:5.97:97,6,0	0/1:22,0:22:23.08:23,0,502	0/0:24,0:24:0.18:0,0,768	0/1:39,0:39:99:136,0,777	0/1:16,0:16:99:119,0,195
chr10	61256907	.	AAATTTC	A	28143.20	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=4.408;DP=569;FS=1.043;HRun=0;HaplotypeScore=140.7640;InbreedingCoeff=0.9737;MQ=79.57;MQ0=0;MQRankSum=-13.130;QD=56.63;ReadPosRankSum=7.735;VQSLOD=4.7949;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,24:29:39.13:915,39,0	1/1:1,7:8:18.06:423,18,0	0/0:21,0:21:60.21:0,60,1907	0/0:23,0:23:66.20:0,66,1907	1/1:2,22:24:63.22:1478,63,0	1/1:1,20:21:54.19:1267,54,0	1/1:0,9:9:27.09:634,27,0	0/0:28,0:28:84.29:0,84,2809	1/1:5,21:26:63.22:1478,63,0	1/1:1,21:21:60.16:1356,60,0	1/1:0,23:23:60.21:1347,60,0	1/1:2,11:13:27.09:626,27,0	1/1:1,21:22:51.18:1190,51,0	1/1:0,22:22:60.21:1408,60,0	1/1:2,21:23:48.16:1127,48,0	1/1:1,16:17:45.15:1024,45,0	1/1:2,11:13:14.71:351,15,0	1/1:0,6:6:18.06:422,18,0	1/1:3,10:12:27.09:604,27,0	1/1:1,30:29:84.29:1969,84,0	1/1:0,8:8:21.03:412,21,0	1/1:0,20:20:54.19:1268,54,0	1/1:1,21:22:57.06:1338,57,0	1/1:2,6:8:12.04:282,12,0	1/1:1,46:46:99:2835,123,0	1/1:2,24:26:72.25:1645,72,0	1/1:0,35:35:96.33:2253,96,0	1/1:0,9:9:21.07:493,21,0
chr10	61258949	.	G	GA	285.96	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-4.155;DP=677;FS=19.544;HRun=8;HaplotypeScore=58.2793;InbreedingCoeff=0.9294;MQ=52.55;MQ0=42;MQRankSum=-5.524;QD=10.21;ReadPosRankSum=-2.418;VQSLOD=0.2438;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:60.36:0,60,689	0/0:11,0:11:30.01:0,30,275	0/0:32,0:6:9:0,9,82	0/0:53,0:8:20.96:0,21,182	0/0:34,0:34:84.03:0,84,769	0/0:25,0:25:66.02:0,66,599	0/0:21,0:21:57.02:0,57,517	1/1:13,15:14:33.10:381,33,0	0/0:27,0:27:68.99:0,69,620	0/0:32,0:32:84.04:0,84,767	0/0:19,0:18:42.01:0,42,384	0/0:12,0:12:36.02:0,36,329	0/0:21,0:21:56.96:0,57,508	0/0:16,0:16:45.01:0,45,407	0/0:24,0:24:63.02:0,63,573	0/0:16,0:16:33.01:0,33,302	0/0:32,0:35:85.10:0,85,748	0/0:29,0:29:69.02:0,69,626	0/0:22,1:20:19.42:0,19,428	0/0:22,0:22:57.02:0,57,518	0/0:12,0:12:26.62:0,27,247	0/0:29,0:27:66.01:0,66,599	0/0:25,0:25:63.03:0,63,576	0/0:16,0:16:42.02:0,42,384	0/0:10,0:10:27.01:0,27,247	0/0:30,0:30:90.04:0,90,820	0/0:27,0:25:72.02:0,72,655	0/0:9,0:9:20.99:0,21,186
chr10	61261026	.	T	TA	13073.40	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-1.050;DP=521;FS=3.366;HRun=8;HaplotypeScore=92.9414;InbreedingCoeff=0.9718;MQ=70.56;MQ0=1;MQRankSum=-3.764;QD=26.90;ReadPosRankSum=4.096;VQSLOD=5.1109;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,20:23:48.14:554,48,0	1/1:0,7:7:14.92:173,15,0	0/0:17,0:12:22.39:0,22,210	0/0:18,0:16:14.11:0,14,174	1/1:1,27:29:81.03:900,81,0	1/1:3,13:16:33.10:381,33,0	1/1:2,12:14:33.10:381,33,0	1/1:10,18:28:29.70:585,30,0	1/1:0,10:10:27.08:312,27,0	1/1:1,24:26:72.14:788,72,0	1/1:1,12:13:30:328,30,0	1/1:2,10:12:18.05:208,18,0	1/1:2,12:14:33.10:381,33,0	1/1:4,11:15:33.10:379,33,0	1/1:2,10:12:33.06:366,33,0	1/1:2,18:20:48.14:554,48,0	1/1:2,21:23:63.15:712,63,0	1/1:4,18:23:42.85:496,43,0	1/1:1,15:16:45.13:519,45,0	1/1:1,27:28:81.19:918,81,0	1/1:0,12:12:30.09:346,30,0	1/1:1,19:20:54.12:608,54,0	1/1:2,16:18:36.11:416,36,0	1/1:2,17:19:42.12:485,42,0	1/1:3,9:12:21.06:242,21,0	1/1:3,25:28:72.21:831,72,0	1/1:2,28:29:63:727,63,0	1/1:1,17:18:42.12:485,42,0
chr10	61262053	.	GT	G	328.69	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=4.204;DP=484;FS=5.381;HRun=8;HaplotypeScore=51.2067;InbreedingCoeff=0.7006;MQ=65.02;MQ0=1;MQRankSum=-2.156;QD=7.47;ReadPosRankSum=-3.370;VQSLOD=-0.1433;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:45.14:0,45,541	0/0:9,0:9:27.08:0,27,326	0/1:10,0:5:5.28:5,0,53	0/0:21,0:14:26.82:0,27,235	0/0:18,0:18:51.13:0,51,594	0/0:19,0:19:51.13:0,51,595	0/0:9,0:9:24.07:0,24,290	1/1:9,25:28:44.52:423,45,0	0/0:19,0:19:51.15:0,51,605	0/0:21,0:21:51.15:0,51,603	0/0:12,0:12:27.08:0,27,322	0/0:16,0:16:42.13:0,42,507	0/0:10,0:10:27.08:0,27,325	0/0:14,0:14:39.09:0,39,457	0/0:10,0:10:24.07:0,24,290	0/0:17,0:17:45.13:0,45,537	0/0:23,0:23:48.15:0,48,580	0/0:30,0:31:90.28:0,90,1085	0/0:20,0:19:54.17:0,54,652	0/0:24,0:24:66.18:0,66,773	0/0:9,0:9:24.07:0,24,290	0/0:11,0:11:30.09:0,30,362	0/0:21,0:21:57.17:0,57,688	0/0:11,0:11:27.07:0,27,313	0/0:17,0:17:48.15:0,48,580	0/0:17,0:18:51.02:0,51,594	0/0:26,0:26:72.21:0,72,858	0/0:13,0:13:33.10:0,33,399
chr10	61262317	.	T	TA	13497.14	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-7.069;DP=491;FS=9.157;HRun=7;HaplotypeScore=48.6909;InbreedingCoeff=0.9822;MQ=62.24;MQ0=0;MQRankSum=-0.333;QD=29.21;ReadPosRankSum=4.571;VQSLOD=4.8885;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,19:23:28.35:581,28,0	1/1:0,5:5:15.05:181,15,0	0/0:16,0:14:30.03:0,30,286	0/0:13,0:12:29.63:0,30,267	1/1:5,16:21:51.15:606,51,0	1/1:1,17:18:45.14:544,45,0	1/1:0,7:7:18.06:217,18,0	1/1:3,25:28:75.20:881,75,0	1/1:1,13:14:39.12:471,39,0	1/1:1,16:17:48.15:580,48,0	1/1:1,20:21:51.15:616,51,0	1/1:0,16:16:45.14:544,45,0	1/1:5,20:25:66.20:788,66,0	1/1:3,17:20:42.13:507,42,0	1/1:6,18:24:48.15:580,48,0	1/1:0,11:11:33.10:399,33,0	1/1:3,17:20:25.85:588,26,0	1/1:4,18:22:51.16:616,51,0	1/1:10,11:22:35.93:401,36,0	1/1:2,20:22:60.18:725,60,0	1/1:2,9:11:24.07:290,24,0	1/1:3,13:16:39.12:471,39,0	1/1:1,17:18:39.12:471,39,0	1/1:2,12:14:36.11:435,36,0	1/1:1,9:10:27.08:326,27,0	1/1:4,20:24:60.18:725,60,0	1/1:1,23:23:60.05:701,60,0	1/1:0,8:8:21.06:254,21,0
chr10	61263725	.	T	TA	3208.32	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-10.955;DP=658;FS=14.078;HRun=8;HaplotypeScore=71.4460;InbreedingCoeff=0.9979;MQ=70.04;MQ0=0;MQRankSum=-1.904;QD=27.42;ReadPosRankSum=1.291;VQSLOD=3.0753;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,120,1097	0/0:7,0:7:21.01:0,21,192	0/0:22,0:24:37.42:0,37,376	0/0:12,0:11:24.01:0,24,219	0/0:31,0:31:84.03:0,84,764	1/1:0,23:23:54.16:623,54,0	1/1:1,18:19:54.16:623,54,0	0/0:18,0:18:30:0,30,275	0/0:22,0:22:49.84:0,50,536	0/0:23,0:23:57.02:0,57,522	0/0:19,0:19:48.01:0,48,435	0/0:19,0:19:54.03:0,54,494	0/0:28,0:28:66.01:0,66,604	0/0:31,0:31:72:0,72,652	0/0:34,0:34:90:0,90,816	0/0:22,0:22:63.03:0,63,576	0/0:21,0:21:45.19:0,45,428	0/0:18,0:18:54.03:0,54,494	0/0:26,0:26:75.04:0,75,686	0/0:25,0:25:72:0,72,651	0/0:27,0:27:78.04:0,78,714	1/1:4,23:28:51.98:788,52,0	1/1:2,23:25:57.02:657,57,0	1/1:1,21:22:60.18:692,60,0	0/0:23,0:23:63.03:0,63,576	0/0:26,0:26:72.04:0,72,659	0/0:30,1:31:49.41:0,49,707	0/0:12,0:12:24:0,24,219
chr10	61265281	.	AC	A	641.30	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=3.626;DP=488;FS=5.565;HRun=1;HaplotypeScore=55.4526;InbreedingCoeff=0.6714;MQ=69.10;MQ0=0;MQRankSum=3.841;QD=22.90;ReadPosRankSum=-3.127;VQSLOD=2.6217;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,1:25:45.90:0,46,981	0/0:11,0:11:33.09:0,33,443	0/0:10,0:9:18.27:0,18,189	0/1:10,0:10:8.30:8,0,125	0/0:33,0:33:96.32:0,96,1386	0/0:15,0:15:42.14:0,42,614	0/0:8,0:8:21.03:0,21,250	1/1:0,18:18:54.17:734,54,0	0/0:15,0:15:45.13:0,45,637	0/0:20,0:20:60.19:0,60,842	0/0:24,0:24:66.11:0,66,911	0/0:16,0:16:48.16:0,48,701	0/0:21,0:21:63.15:0,63,842	0/0:17,0:17:51.17:0,51,746	0/0:15,0:15:45.12:0,45,619	0/0:11,0:11:33.09:0,33,462	0/0:27,0:27:81.24:0,81,1148	0/0:9,0:9:27.09:0,27,395	0/0:22,0:22:66.08:0,66,869	0/0:30,0:30:90.14:0,90,1246	0/0:15,0:15:45.15:0,45,658	0/0:12,0:12:33.11:0,33,481	0/0:18,0:18:54.11:0,54,762	0/0:7,0:7:21.04:0,21,285	0/0:20,0:20:60.09:0,60,810	0/0:22,0:22:66.14:0,66,913	0/0:20,0:20:60.13:0,60,785	0/0:17,0:17:45.15:0,45,657
chr10	61265289	.	C	CA	1294.93	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-7.098;DP=499;FS=5.768;HRun=8;HaplotypeScore=54.6427;InbreedingCoeff=0.9613;MQ=73.02;MQ0=0;MQRankSum=1.106;QD=22.33;ReadPosRankSum=2.173;VQSLOD=4.2910;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:60.03:0,60,549	0/0:10,0:10:27.01:0,27,247	0/0:15,0:14:29.93:0,30,253	0/0:9,1:11:12.20:0,12,87	0/0:31,0:31:72.03:0,72,657	1/1:2,12:14:33.10:381,33,0	1/1:4,4:8:9.03:104,9,0	0/0:18,0:18:48.02:0,48,439	0/0:13,0:13:38.98:0,39,348	0/0:22,0:22:53.97:0,54,483	0/0:24,0:24:63.03:0,63,576	0/0:16,0:16:45.02:0,45,412	0/0:23,0:23:66.04:0,66,604	0/0:17,0:17:51.03:0,51,467	0/0:17,0:17:48.01:0,48,435	0/0:11,0:11:30.02:0,30,274	0/0:25,0:25:63.02:0,63,576	0/0:9,0:9:27.01:0,27,247	0/0:27,0:27:69.03:0,69,631	0/0:28,0:28:72.02:0,72,659	0/0:14,0:14:30.01:0,30,274	1/1:2,10:12:24.03:262,24,0	1/1:0,16:18:53.82:583,54,0	1/1:2,4:6:8.11:133,8,0	0/0:22,0:22:63.03:0,63,576	0/0:23,0:23:56.86:0,57,508	0/0:20,0:20:60.03:0,60,549	0/0:22,0:22:60.03:0,60,549
chr10	61265615	.	A	AAAGAACAACCTTTGAAT	1440.54	PASS	AB=0.600;AC=25;AF=0.962;AN=26;BaseQRankSum=-1.734;DP=28;FS=0.000;HRun=0;HaplotypeScore=19.9173;InbreedingCoeff=-0.1700;MQ=132.39;MQ0=0;MQRankSum=-1.103;QD=60.02;ReadPosRankSum=-1.261;VQSLOD=2.3068;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	1/1:2,1:4:6.02:347,6,0	0/1:1,0:3:0.88:365,0,1	1/1:1,0:1:3.01:40,3,0	./.	1/1:2,0:2:5.98:64,6,0	1/1:5,0:5:15.03:189,15,0	1/1:1,0:1:3.01:51,3,0	1/1:1,0:1:3.01:75,3,0	./.	./.	1/1:1,0:1:3.01:40,3,0	./.	./.	1/1:1,0:1:3.01:91,3,0	./.	./.	1/1:1,0:1:3.01:125,3,0	1/1:1,0:1:3:25,3,0	./.	1/1:1,0:1:2.98:21,3,0	./.	./.	./.	./.	1/1:2,0:2:6.02:80,6,0	./.
chr10	61273856	.	TAAATGCAGTCAG	T	5631.12	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=12.116;DP=761;FS=6.621;HRun=0;HaplotypeScore=254.3961;InbreedingCoeff=0.9575;MQ=90.81;MQ0=0;MQRankSum=-12.529;QD=64.73;ReadPosRankSum=0.231;VQSLOD=3.5526;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,160,9772	0/0:11,0:11:33.11:0,33,2081	0/0:33,0:33:99:0,99,4483	0/0:30,0:30:90.16:0,90,4372	0/0:23,0:22:69.13:0,69,3448	1/1:1,18:19:42.01:1430,42,0	1/1:0,13:13:17.99:529,18,0	0/0:36,0:36:99:0,102,5748	0/0:23,0:23:69.22:0,69,3911	0/0:28,0:28:84.29:0,84,5001	0/0:26,0:26:78.04:0,78,4085	0/0:21,0:21:63.21:0,63,3495	0/0:33,0:33:99:0,99,5709	0/0:30,0:30:90.31:0,90,5599	0/0:28,0:28:84.27:0,84,5062	0/0:33,0:33:99:0,99,5965	0/0:26,0:26:78.20:0,78,4329	0/0:9,0:9:24.08:0,24,1427	0/0:30,0:30:90.29:0,90,4952	0/0:38,0:38:99:0,114,6607	0/0:63,0:63:99:0,187,11095	1/1:0,20:20:50.94:1655,51,0	1/1:0,16:16:38.46:1254,38,0	1/1:0,19:19:23.42:763,23,0	0/0:37,0:37:99:0,111,6417	0/0:28,0:28:84.29:0,84,5033	0/0:34,0:34:99:0,102,6429	0/0:1,0:1:3.01:0,3,169
chr10	61274341	.	CA	C	6752.77	PASS	AB=0.973;AC=52;AF=0.929;AN=56;BaseQRankSum=3.108;DP=611;FS=3.460;HRun=1;HaplotypeScore=110.5687;InbreedingCoeff=-0.0770;MQ=78.47;MQ0=0;MQRankSum=-5.058;QD=11.05;ReadPosRankSum=7.305;VQSLOD=3.0664;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:29,1:30:75.71:392,76,0	1/1:8,0:8:19.36:88,19,0	0/1:12,0:12:28.31:28,0,107	0/1:22,2:25:96.51:97,0,214	1/1:14,0:14:38.57:174,39,0	1/1:24,0:24:43.21:285,43,0	1/1:17,2:19:47.40:268,47,0	1/1:26,0:26:63.79:264,64,0	1/1:20,0:20:49.94:233,50,0	1/1:27,1:28:17.76:219,18,0	1/1:17,0:17:43.97:196,44,0	1/1:21,0:21:56.25:304,56,0	1/1:26,1:27:51.32:345,51,0	1/1:29,0:29:52.81:319,53,0	1/1:32,0:32:85.78:406,86,0	1/1:23,0:23:35.85:235,36,0	1/1:29,0:29:72.74:350,73,0	1/1:29,0:29:80.36:375,80,0	0/1:24,0:24:41.87:165,0,42	1/1:15,1:16:20.38:179,20,0	1/1:32,2:34:89.47:453,89,0	0/1:12,0:12:16.44:90,0,16	1/1:11,0:11:25.56:134,26,0	1/1:20,0:20:47.35:225,47,0	1/1:15,0:15:16.67:154,17,0	1/1:20,0:20:50.90:202,51,0	1/1:33,1:34:41.72:397,42,0	1/1:11,1:12:31.17:175,31,0
chr10	61275135	.	A	AT	3432.11	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-12.860;DP=579;FS=0.876;HRun=6;HaplotypeScore=55.4815;InbreedingCoeff=0.9977;MQ=67.41;MQ0=0;MQRankSum=-0.748;QD=32.38;ReadPosRankSum=1.182;VQSLOD=3.9255;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:90.15:0,90,900	0/0:7,0:7:18.02:0,18,176	0/0:16,0:16:36.05:0,36,362	0/0:12,0:12:33.07:0,33,332	0/0:24,0:24:66.12:0,66,660	1/1:2,26:28:69.22:868,69,0	1/1:3,12:15:33.11:415,33,0	0/0:19,0:19:51.11:0,51,516	0/0:19,0:19:45.10:0,45,459	0/0:24,0:24:72.16:0,72,730	0/0:9,0:9:27.06:0,27,275	0/0:23,0:23:54.11:0,54,544	0/0:20,0:20:57.13:0,57,581	0/0:17,0:17:48.10:0,48,483	0/0:18,0:18:54.12:0,54,551	0/0:16,0:16:48.09:0,48,480	0/0:30,0:30:75.16:0,75,765	0/0:34,0:34:96.21:0,96,973	0/0:22,0:23:39.02:0,39,385	0/0:17,0:17:48.10:0,48,484	0/0:23,0:23:63.12:0,63,635	1/1:1,23:24:66.21:828,66,0	1/1:1,16:17:39.12:491,39,0	1/1:0,22:22:66.21:830,66,0	0/0:23,0:23:66.12:0,66,660	0/0:28,0:28:81.18:0,81,826	0/0:26,0:26:72.16:0,72,734	0/0:15,0:15:42.10:0,42,428
chr10	61276502	.	CTGTT	C	27338.61	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=6.176;DP=711;FS=1.476;HRun=0;HaplotypeScore=137.3983;InbreedingCoeff=0.9990;MQ=75.33;MQ0=1;MQRankSum=-5.491;QD=43.74;ReadPosRankSum=9.297;VQSLOD=4.7737;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,40:43:78.26:1511,78,0	1/1:2,14:16:42.14:814,42,0	0/0:28,0:28:38.70:0,39,1725	0/0:26,0:26:61.19:0,61,1864	1/1:0,15:15:33.11:639,33,0	1/1:0,20:20:51.17:988,51,0	1/1:3,15:18:45.15:872,45,0	0/0:32,0:32:84.29:0,84,2290	1/1:1,16:17:45.15:872,45,0	1/1:4,24:28:72.24:1362,72,0	1/1:0,17:17:42.14:813,42,0	1/1:0,39:39:99:1974,102,0	1/1:0,34:34:93.32:1802,93,0	1/1:1,26:27:64.10:1222,64,0	1/1:1,30:31:81.28:1570,81,0	1/1:2,24:26:63.22:1212,63,0	1/1:3,34:37:72.72:1396,73,0	1/1:0,22:20:42.14:814,42,0	1/1:3,10:13:27.08:479,27,0	1/1:0,19:19:30.10:581,30,0	1/1:1,46:47:78.74:1513,79,0	1/1:3,14:17:33.11:639,33,0	1/1:2,27:29:50.86:987,51,0	1/1:1,37:38:93.15:1802,93,0	1/1:1,23:24:54.19:1047,54,0	1/1:1,17:17:48.16:918,48,0	1/1:1,19:20:48.16:930,48,0	1/1:0,10:10:30.10:581,30,0
chr10	61277366	.	TCTTTA	T	17160.07	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=8.069;DP=456;FS=0.000;HRun=0;HaplotypeScore=99.2929;InbreedingCoeff=0.8917;MQ=83.80;MQ0=0;MQRankSum=-9.392;QD=44.00;ReadPosRankSum=7.392;VQSLOD=4.6136;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,10:14:21.07:430,21,0	1/1:0,6:6:18.06:369,18,0	0/0:21,0:22:27.88:0,28,1384	0/0:13,0:13:23.91:0,24,564	1/1:1,16:17:39.13:799,39,0	1/1:0,22:22:60.21:1230,60,0	1/1:4,4:8:9.03:184,9,0	0/0:31,0:31:81.26:0,81,2341	1/1:2,17:19:42.14:861,42,0	1/1:2,20:22:60.21:1230,60,0	1/1:2,13:15:30.10:615,30,0	1/1:1,12:13:36.12:738,36,0	1/1:1,24:25:54.19:1107,54,0	1/1:2,15:17:39.13:799,39,0	1/1:2,11:13:21.07:430,21,0	1/1:1,20:21:48.16:984,48,0	1/1:0,8:8:15.05:304,15,0	1/1:3,7:10:18.06:369,18,0	1/1:7,10:17:30.10:615,30,0	1/1:4,18:22:39.13:799,39,0	1/1:1,6:7:9.03:184,9,0	1/1:1,8:9:21.07:430,21,0	1/1:1,15:16:39.13:796,39,0	1/1:5,6:11:6.02:123,6,0	1/1:1,13:14:27.09:554,27,0	1/1:1,26:27:69.22:1365,69,0	1/1:1,30:31:81.28:1661,81,0	1/1:1,5:6:8.86:184,9,0
chr10	61279950	.	C	CT	258.02	PASS	AC=18;AF=0.818;AN=22;BaseQRankSum=1.205;DP=48;FS=5.859;HRun=0;HaplotypeScore=16.4968;InbreedingCoeff=0.4079;MQ=126.65;MQ0=1;MQRankSum=-2.152;QD=13.58;ReadPosRankSum=-4.390;VQSLOD=1.9483;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:10,0:8:21.06:0,21,281	0/0:13,0:12:36.11:0,36,486	1/1:1,2:3:3:36,3,0	./.	./.	1/1:5,2:6:8.98:102,9,0	./.	./.	1/1:1,1:2:3:45,3,0	./.	1/1:0,1:1:3.01:45,3,0	1/1:1,0:1:2.98:21,3,0	1/1:0,1:1:2.97:20,3,0	./.	./.	./.	1/1:1,0:1:3:26,3,0	./.	./.	./.	./.	./.	1/1:0,2:2:3.01:45,3,0	1/1:0,1:1:2.90:16,3,0	./.	./.
chr10	61281636	.	CAA	C	17283.65	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-3.365;DP=629;FS=22.908;HRun=10;HaplotypeScore=92.8015;InbreedingCoeff=0.8635;MQ=74.39;MQ0=2;MQRankSum=-4.552;QD=28.85;ReadPosRankSum=4.145;VQSLOD=3.5035;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,21:25:63.16:702,63,0	1/1:0,17:17:51.14:569,51,0	0/0:14,0:13:2.49:0,2,129	0/0:15,0:14:30.09:0,30,429	1/1:6,29:36:89.97:981,90,0	1/1:0,25:25:72.19:803,72,0	1/1:1,22:23:57.15:636,57,0	1/1:4,21:25:63.09:670,63,0	1/1:2,14:16:33.09:368,33,0	1/1:4,28:32:90.22:993,90,0	1/1:1,15:16:45.12:502,45,0	1/1:0,19:19:51.14:568,51,0	1/1:1,22:23:60.16:669,60,0	1/1:2,27:29:72.12:787,72,0	1/1:4,17:22:38.84:413,39,0	1/1:3,20:23:57.15:635,57,0	1/1:1,21:22:60.16:669,60,0	1/1:3,10:13:23.54:342,24,0	1/1:3,24:27:72.15:781,72,0	1/1:1,27:28:75.19:836,75,0	1/1:2,24:26:72.19:803,72,0	1/1:3,18:21:56.82:613,57,0	1/1:0,32:32:86.97:969,87,0	1/1:2,16:18:48.11:535,48,0	1/1:3,28:31:78.20:870,78,0	1/1:1,22:23:66.18:736,66,0	1/1:0,23:23:66.18:735,66,0	1/1:1,3:4:9.02:100,9,0
chr10	61282644	.	TTTTTGTTGTTG	T	4382.05	PASS	AB=1.000;AC=20;AF=0.357;AN=56;BaseQRankSum=-8.122;DP=584;FS=4.034;HRun=0;HaplotypeScore=173.0594;InbreedingCoeff=0.1998;MQ=69.75;MQ0=3;MQRankSum=-1.646;QD=13.96;ReadPosRankSum=-4.055;VQSLOD=2.8706;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:35,0:36:99:423,0,1018	0/0:16,0:16:10.12:0,10,870	0/0:18,0:13:33.11:0,33,636	0/0:32,0:31:81.74:0,82,1769	0/1:18,0:18:78.26:78,0,387	1/1:0,24:24:33.11:1093,33,0	1/1:1,19:20:18.06:618,18,0	0/1:32,0:32:99:192,0,404	0/0:13,0:13:18.06:0,18,763	0/1:25,0:25:99:310,0,950	0/1:18,0:18:88.89:89,0,666	0/0:22,0:22:33.11:0,33,1430	0/0:18,0:17:21.07:0,21,916	0/0:30,0:29:33.11:0,33,1330	0/0:24,0:24:27.09:0,27,1137	0/0:20,0:20:27.09:0,27,1074	0/1:18,0:17:60.86:61,0,855	0/1:13,0:13:3.18:3,0,201	0/1:18,0:18:99:223,0,676	0/1:22,0:21:38.89:39,0,356	0/0:19,0:19:21.07:0,21,873	1/1:2,14:16:24.03:464,24,0	1/1:1,15:15:11.70:405,12,0	1/1:1,16:17:5.89:119,6,0	0/0:27,0:27:30.10:0,30,1311	0/1:21,0:21:99:265,0,742	0/0:22,0:21:36.12:0,36,1563	0/0:9,0:9:9.03:0,9,393
chr10	61282646	.	T	TGTTG	14381.99	PASS	AB=0.989;AC=45;AF=0.804;AN=56;BaseQRankSum=-9.652;DP=599;FS=9.049;HRun=0;HaplotypeScore=98.1188;InbreedingCoeff=0.4550;MQ=67.92;MQ0=3;MQRankSum=-2.044;QD=27.82;ReadPosRankSum=4.592;VQSLOD=3.9208;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:37:56.41:1251,56,0	1/1:0,15:17:26.74:592,27,0	0/0:17,0:12:33.11:0,33,475	0/0:31,0:30:81.04:0,81,1143	1/1:1,0:20:21.07:322,21,0	0/1:24,0:24:84.18:119,0,84	0/1:19,0:19:14.63:15,0,88	0/0:7,0:34:83.78:0,84,1028	1/1:0,0:17:18.06:391,18,0	1/1:0,23:25:66.19:1242,66,0	1/1:1,16:18:27.01:557,27,0	1/1:0,21:24:33.05:933,33,0	1/1:1,17:20:21.01:593,21,0	1/1:2,26:32:33.11:882,33,0	1/1:0,24:24:26.98:763,27,0	1/1:0,19:23:27.09:762,27,0	1/1:5,6:15:18.91:709,19,0	1/1:2,0:13:8.75:95,9,0	1/1:1,14:17:51.04:868,51,0	1/1:0,17:20:17.99:360,18,0	1/1:1,18:20:21.07:594,21,0	0/1:14,0:14:0.16:197,0,0	0/1:16,0:15:19.31:19,0,51	0/1:17,0:18:15.11:33,0,15	1/1:0,27:27:30.10:848,30,0	1/1:2,19:21:57.15:1057,57,0	1/1:0,21:22:36.12:1005,36,0	1/1:1,7:9:7.84:174,8,0
chr10	61283434	.	TACATACACACACACACACACAC	T	466.68	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-0.848;DP=479;FS=1.027;HRun=0;HaplotypeScore=256.1804;InbreedingCoeff=0.5906;MQ=50.42;MQ0=24;MQRankSum=0.970;QD=16.67;ReadPosRankSum=-3.091;VQSLOD=2.1011;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:3.01:0,3,77	0/0:6,0:6:9.03:0,9,107	0/0:19,0:17:45.13:0,45,981	0/0:23,0:20:24.29:0,24,1273	0/0:13,0:13:18.03:0,18,419	0/0:21,0:20:24.07:0,24,1710	0/0:19,0:18:28.78:0,29,1265	1/1:17,11:23:59.83:561,60,0	0/0:14,0:12:18.03:0,18,417	0/0:12,0:12:28.94:0,29,310	0/0:17,0:16:8.98:0,9,159	0/0:23,0:22:12.03:0,12,261	0/0:14,0:14:30.08:0,30,710	0/0:23,0:19:14.97:0,15,382	0/0:13,0:13:6:0,6,96	0/0:22,0:22:21.34:0,21,354	0/0:14,0:14:17.96:0,18,170	0/0:10,0:6:12.02:0,12,298	0/0:16,0:13:32.66:0,33,574	0/0:20,0:20:26.93:0,27,468	0/0:12,0:7:9.01:0,9,186	0/0:14,0:14:9.02:0,9,268	0/0:21,0:20:14.94:0,15,460	0/0:20,0:16:24.08:0,24,1472	0/0:14,0:14:17.94:0,18,359	0/0:20,0:19:35.32:0,35,404	0/0:22,0:21:38.93:0,39,477	0/0:11,0:11:21.62:0,22,330
chr10	61283438	.	TACACACACAC	T	3634.18	PASS	AB=0.662;AC=25;AF=0.595;AN=42;BaseQRankSum=-0.473;DP=468;FS=9.798;HRun=0;HaplotypeScore=166.3769;InbreedingCoeff=0.4010;MQ=45.01;MQ0=35;MQRankSum=-4.400;QD=15.53;ReadPosRankSum=1.656;VQSLOD=2.2633;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	1/1:1,5:6:6.02:172,6,0	0/0:16,0:14:3.01:0,3,35	./.	./.	0/0:20,0:19:18.06:0,18,712	0/0:19,0:16:12.98:0,13,483	1/1:26,0:20:3.87:22,4,0	1/1:7,5:10:6.02:172,6,0	0/1:3,7:11:18.78:472,0,19	./.	1/1:8,15:22:6.02:169,6,0	1/1:7,4:12:12.04:277,12,0	0/1:15,7:18:17.47:65,0,17	./.	1/1:10,11:21:2.53:86,3,0	1/1:12,3:14:12.04:345,12,0	0/0:11,0:6:3.01:0,3,79	1/1:13,2:12:14.80:360,15,0	1/1:9,10:19:2.94:18,3,0	./.	0/0:16,0:15:3.01:0,3,45	0/0:21,0:20:3.01:0,3,96	0/0:20,0:16:17.93:0,18,600	./.	1/1:8,0:18:26.22:745,26,0	1/1:9,11:19:18.06:525,18,0	0/1:5,0:11:14.22:206,0,14
chr10	61283442	.	C	CAG	2335.48	PASS	AB=1.000;AC=47;AF=0.839;AN=56;BaseQRankSum=0.695;DP=451;FS=1.833;HRun=0;HaplotypeScore=129.2677;InbreedingCoeff=0.3991;MQ=42.37;MQ0=39;MQRankSum=-0.903;QD=5.87;ReadPosRankSum=3.453;VQSLOD=3.3855;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:16:2.94:18,3,0	1/1:6,0:6:4.21:23,4,0	0/0:11,0:9:26.96:0,27,260	0/0:17,0:14:35.98:0,36,352	1/1:12,0:12:11.93:92,12,0	1/1:23,0:22:24.05:338,24,0	1/1:20,0:16:21.02:249,21,0	0/0:25,0:19:38.72:0,39,296	1/1:11,0:9:10.76:78,11,0	0/1:11,0:11:21.07:39,0,21	1/1:15,0:14:5.99:50,6,0	1/1:22,0:21:5.94:43,6,0	1/1:11,0:11:15.82:118,16,0	1/1:21,0:17:14.86:110,15,0	1/1:14,0:12:2.96:19,3,0	1/1:20,0:20:9.82:70,10,0	1/1:12,0:11:3.78:22,4,0	0/1:10,0:4:13.05:13,0,47	1/1:16,0:12:28.77:211,29,0	1/1:18,0:18:20.83:153,21,0	1/1:16,0:9:8.94:66,9,0	1/1:6,10:15:5.74:37,6,0	1/1:10,13:22:8.93:68,9,0	1/1:21,0:17:5.93:252,6,0	1/1:14,0:14:14.96:122,15,0	1/1:18,0:16:27.64:147,28,0	1/1:19,0:18:23.11:134,23,0	0/1:10,0:10:25:25,0,27
chr10	61284271	.	CA	C	14201.83	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-4.648;DP=544;FS=1.880;HRun=7;HaplotypeScore=69.8713;InbreedingCoeff=0.9296;MQ=73.03;MQ0=0;MQRankSum=-6.259;QD=27.31;ReadPosRankSum=3.515;VQSLOD=5.6417;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,13:14:39.09:398,39,0	1/1:0,11:11:33.08:337,33,0	0/0:13,1:13:5.47:0,5,360	0/0:10,0:10:24.06:0,24,278	1/1:4,14:18:39.09:398,39,0	1/1:0,28:28:78.18:796,78,0	1/1:1,11:12:30.07:306,30,0	1/1:4,36:40:99:1065,108,0	1/1:1,20:21:60.14:612,60,0	1/1:2,19:21:57.12:576,57,0	1/1:1,22:23:60.13:612,60,0	1/1:0,10:10:30.07:306,30,0	1/1:1,17:18:42.09:428,42,0	1/1:0,15:15:42.09:429,42,0	1/1:3,20:23:57.13:581,57,0	1/1:1,22:23:60.13:612,60,0	1/1:0,14:14:39.09:398,39,0	1/1:0,12:12:36.02:354,36,0	1/1:4,20:24:25.40:574,25,0	1/1:0,34:34:99:996,99,0	1/1:0,9:9:27.06:275,27,0	1/1:0,22:22:63.14:642,63,0	1/1:2,26:28:72.11:722,72,0	1/1:0,10:10:30.07:306,30,0	1/1:2,24:26:69.16:703,69,0	1/1:1,24:25:72.16:734,72,0	1/1:2,31:32:84.19:857,84,0	1/1:0,6:6:18.04:184,18,0
chr10	61286784	.	T	TAA	1040.96	PASS	AC=2;AF=0.037;AN=54;BaseQRankSum=-6.081;DP=322;FS=1.952;HRun=4;HaplotypeScore=58.2301;InbreedingCoeff=0.7504;MQ=56.20;MQ0=0;MQRankSum=1.354;QD=45.26;ReadPosRankSum=-3.827;VQSLOD=2.0915;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:33.11:0,33,435	0/0:5,0:5:15.01:0,15,180	0/0:7,0:7:17.26:0,17,192	0/0:7,0:7:21.07:0,21,273	0/0:14,0:14:26.24:0,26,389	0/0:18,0:18:45.13:0,45,581	0/0:6,0:6:15.02:0,15,200	1/1:2,21:23:69.19:1135,69,0	0/0:4,0:4:12.04:0,12,160	0/0:13,0:13:33.11:0,33,439	0/0:18,0:18:33.10:0,33,440	0/0:9,0:9:23.66:0,24,320	0/0:6,0:6:11.99:0,12,159	0/0:6,0:6:18.06:0,18,240	0/0:15,0:15:36.12:0,36,480	0/0:11,0:11:30.10:0,30,400	0/0:11,0:11:30.10:0,30,400	0/0:5,0:5:15.05:0,15,200	0/0:10,0:10:21.07:0,21,280	0/0:30,0:30:81.27:0,81,1080	0/0:8,0:8:18.06:0,18,240	0/0:8,0:8:24.08:0,24,320	0/0:16,0:16:36.12:0,36,480	./.	0/0:25,0:25:75.23:0,75,983	0/0:11,0:11:33.07:0,33,419	0/0:20,0:20:57.19:0,57,760	0/0:1,0:1:3.01:0,3,40
chr10	61288631	.	A	AT	14543.68	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-8.409;DP=464;FS=2.823;HRun=4;HaplotypeScore=37.3311;InbreedingCoeff=0.9690;MQ=77.70;MQ0=0;MQRankSum=-5.470;QD=35.39;ReadPosRankSum=6.227;VQSLOD=4.1171;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,22:22:54.18:739,54,0	1/1:1,8:9:21.07:287,21,0	0/0:17,0:17:48.12:0,48,533	0/0:4,0:4:9.02:0,9,98	1/1:1,25:26:69.15:902,69,0	1/1:3,20:23:54.18:739,54,0	1/1:1,11:12:30.10:410,30,0	0/0:32,0:32:84.23:0,84,945	1/1:2,18:20:51.17:698,51,0	1/1:1,20:21:57.17:762,57,0	1/1:0,15:15:42.10:553,42,0	1/1:1,16:17:45.15:616,45,0	1/1:0,20:20:51.17:698,51,0	1/1:1,9:10:24.08:328,24,0	1/1:1,19:20:57.19:780,57,0	1/1:0,16:16:39.08:511,39,0	1/1:0,18:18:45.62:616,46,0	1/1:2,7:9:21.02:265,21,0	1/1:3,16:19:48.16:656,48,0	1/1:0,22:22:66.22:903,66,0	1/1:0,10:10:30.10:410,30,0	1/1:0,7:7:18.06:246,18,0	1/1:1,14:15:42.10:553,42,0	1/1:0,14:14:39.13:533,39,0	1/1:0,16:16:45.15:616,45,0	1/1:1,11:12:33.11:452,33,0	1/1:2,30:32:75.25:1025,75,0	1/1:0,6:6:18.06:246,18,0
chr10	61292992	.	TA	T	6821.62	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=7.458;DP=264;FS=0.000;HRun=1;HaplotypeScore=36.0593;InbreedingCoeff=0.8813;MQ=57.55;MQ0=0;MQRankSum=-3.197;QD=35.72;ReadPosRankSum=-0.053;VQSLOD=4.2305;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,4:4:11.96:123,12,0	1/1:0,2:2:6.02:83,6,0	0/0:6,0:5:10.37:0,10,182	0/0:2,0:2:5.05:0,5,49	1/1:0,17:17:44.97:527,45,0	0/0:14,0:14:38.99:0,39,487	0/0:7,0:7:21.07:0,21,297	0/0:11,0:11:33.10:0,33,454	1/1:0,13:13:36.12:496,36,0	1/1:0,14:14:40.02:541,40,0	1/1:0,10:10:27.05:350,27,0	1/1:0,10:10:30.10:409,30,0	1/1:0,9:8:21.07:290,21,0	1/1:0,11:11:27.05:346,27,0	1/1:0,15:15:39.13:533,39,0	1/1:0,15:15:42.11:560,42,0	1/1:0,2:2:3.01:42,3,0	1/1:0,3:3:9.03:125,9,0	1/1:0,4:4:12.01:145,12,0	1/1:0,15:15:42.05:536,42,0	1/1:0,6:6:18.06:250,18,0	0/0:14,0:14:39.13:0,39,551	0/0:11,0:11:32.93:0,33,415	0/0:8,0:8:12.03:0,12,169	1/1:0,17:17:45.15:623,45,0	1/1:0,8:8:24.08:326,24,0	1/1:0,13:13:33.06:434,33,0	1/1:0,3:3:6.02:83,6,0
chr10	61293266	.	GT	G	559.71	PASS	AB=0.899;AC=4;AF=0.071;AN=56;BaseQRankSum=3.367;DP=478;FS=4.754;HRun=10;HaplotypeScore=50.3451;InbreedingCoeff=0.4638;MQ=69.03;MQ0=0;MQRankSum=2.954;QD=12.17;ReadPosRankSum=-2.845;VQSLOD=2.3354;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:42.07:0,42,439	0/0:4,0:4:9.02:0,9,99	0/1:11,1:12:2:2,0,206	0/1:6,1:7:11.02:11,0,114	0/0:18,0:18:51.14:0,51,563	0/0:30,0:30:75.17:0,75,806	0/0:13,0:13:39.08:0,39,414	1/1:2,25:27:74.98:651,75,0	0/0:20,0:20:54.15:0,54,597	0/0:15,0:15:42.07:0,42,452	0/0:17,0:17:36.07:0,36,385	0/0:23,0:24:59.95:0,60,631	0/0:24,0:24:60.15:0,60,656	0/0:22,1:23:34.09:0,34,591	0/0:25,1:27:48.96:0,49,736	0/0:20,0:20:60.16:0,60,664	0/0:4,0:4:8.99:0,9,87	0/0:12,0:12:24.06:0,24,265	0/0:17,0:17:39.10:0,39,425	0/0:14,0:14:33.08:0,33,358	0/0:14,0:14:42.10:0,42,456	0/0:16,0:16:39.10:0,39,424	0/0:17,0:17:48.13:0,48,530	0/0:7,0:7:18.05:0,18,199	0/0:13,0:14:32.92:0,33,346	0/0:26,0:26:72.19:0,72,794	0/0:39,0:39:93.24:0,93,1021	0/0:2,0:2:6.02:0,6,66
chr10	61293576	.	GACAGAC	G	148.65	PASS	AB=0.875;AC=18;AF=0.750;AN=24;BaseQRankSum=-1.268;DP=116;FS=1.882;HRun=0;HaplotypeScore=19.7162;InbreedingCoeff=0.1138;MQ=26.53;MQ0=15;MQRankSum=1.808;QD=2.61;ReadPosRankSum=-0.769;VQSLOD=0.9636;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:3,0:3:2.37:0,2,8	./.	./.	0/0:18,0:3:6.07:0,6,49	./.	1/1:11,0:7:1.62:8,2,0	1/1:6,0:5:2.68:11,3,0	0/1:12,6:15:79.52:80,0,163	./.	1/1:2,0:1:1.25:3,1,0	./.	./.	./.	./.	./.	./.	./.	1/1:3,0:2:3.01:41,3,0	1/1:3,0:1:3:29,3,0	./.	./.	1/1:5,0:5:2.80:13,3,0	./.	./.	./.	1/1:2,0:1:2.97:20,3,0	1/1:5,0:5:3.01:31,3,0	0/1:2,0:2:5.14:5,0,14
chr10	61294091	.	TA	T	9680.63	PASS	AB=0.517;AC=39;AF=0.696;AN=56;BaseQRankSum=5.369;DP=563;FS=0.366;HRun=8;HaplotypeScore=63.9521;InbreedingCoeff=0.9549;MQ=85.57;MQ0=0;MQRankSum=-5.376;QD=24.38;ReadPosRankSum=3.072;VQSLOD=5.6049;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,14:14:39.06:376,39,0	1/1:1,12:13:36.06:348,36,0	0/0:25,0:25:57.01:0,57,625	0/0:15,0:15:23.80:0,24,213	1/1:3,14:17:36.04:347,36,0	0/0:31,0:31:81.25:0,81,978	0/0:22,0:22:57.17:0,57,689	0/0:4,0:27:56.43:0,56,324	1/1:1,22:23:63.10:608,63,0	1/1:1,21:22:63.09:602,63,0	1/1:2,27:29:72.11:695,72,0	1/1:2,22:24:53.91:521,54,0	1/1:2,17:19:45.07:435,45,0	1/1:2,14:16:36.06:348,36,0	1/1:1,23:24:63.10:608,63,0	1/1:0,20:20:57.09:551,57,0	1/1:2,12:14:33.05:318,33,0	1/1:1,18:19:39.04:373,39,0	1/1:3,20:23:60.08:574,60,0	1/1:3,14:17:42.07:405,42,0	1/1:0,15:15:36.06:348,36,0	0/0:12,0:14:41.86:0,42,464	0/0:21,0:21:60.16:0,60,710	0/0:9,0:9:21.05:0,21,242	1/1:2,17:19:51.08:493,51,0	1/1:1,25:26:75.12:724,75,0	1/1:0,28:28:75.12:724,75,0	0/1:1,14:15:0.18:283,0,0
chr10	61294877	.	G	GTT	18857.09	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=16.008;DP=634;FS=3.885;HRun=1;HaplotypeScore=158.0708;InbreedingCoeff=0.9996;MQ=76.76;MQ0=0;MQRankSum=-10.691;QD=41.17;ReadPosRankSum=1.328;VQSLOD=5.0414;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,16:19:57.10:845,57,0	1/1:4,9:13:33.06:497,33,0	0/0:19,0:19:57.09:0,57,771	0/0:26,0:25:66.19:0,66,962	1/1:8,24:32:87.01:1193,87,0	0/0:17,0:17:51.14:0,51,738	0/0:15,0:15:42.14:0,42,643	0/0:40,0:39:99:0,117,1678	1/1:5,16:21:60.07:901,60,0	1/1:8,20:28:67.11:1070,67,0	1/1:6,24:30:81.22:1215,81,0	1/1:0,16:16:48.16:784,48,0	1/1:6,16:23:65.40:934,65,0	1/1:6,21:27:78.12:1177,78,0	1/1:6,24:30:87.12:1289,87,0	1/1:6,15:21:57.11:850,57,0	1/1:9,16:25:65.97:960,66,0	1/1:2,11:13:37.33:564,37,0	1/1:4,13:17:48.74:687,49,0	1/1:10,31:41:99:1599,114,0	1/1:5,12:17:42.07:602,42,0	0/0:20,0:20:60.19:0,60,898	0/0:17,0:17:51.16:0,51,754	0/0:22,0:22:66.21:0,66,988	1/1:4,26:30:87.28:1333,87,0	1/1:5,10:15:42.14:695,42,0	1/1:5,27:32:95.39:1380,95,0	1/1:5,3:8:23.95:282,24,0
chr10	61294881	.	C	CTG	16055.14	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=17.745;DP=637;FS=9.832;HRun=0;HaplotypeScore=159.8911;InbreedingCoeff=0.9972;MQ=77.09;MQ0=0;MQRankSum=-13.493;QD=34.75;ReadPosRankSum=2.312;VQSLOD=6.5534;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,16:21:45.15:690,45,0	1/1:5,8:13:33.10:488,33,0	0/0:17,0:17:39.12:0,39,530	0/0:25,0:25:62.70:0,63,814	1/1:15,21:36:74.40:1011,74,0	0/0:17,0:17:48.15:0,48,655	0/0:17,0:17:48.13:0,48,636	0/0:38,0:37:99:0,105,1427	1/1:5,16:21:51.16:735,51,0	1/1:11,17:28:80.78:1060,81,0	1/1:5,24:29:78.23:1101,78,0	1/1:2,16:18:51.15:742,51,0	1/1:3,17:20:54.18:804,54,0	1/1:6,19:25:63.19:898,63,0	1/1:8,21:29:65.25:947,65,0	1/1:12,13:25:54.10:694,54,0	1/1:14,14:28:53.49:729,53,0	1/1:3,10:13:32.47:449,32,0	1/1:2,14:16:46.93:656,47,0	1/1:10,30:40:99:1449,107,0	1/1:6,11:17:39.07:524,39,0	0/0:20,0:20:60.19:0,60,821	0/0:19,0:19:54.15:0,54,719	0/0:22,0:22:63.19:0,63,864	1/1:2,25:28:78.26:1152,78,0	1/1:5,10:15:36.01:508,36,0	1/1:9,23:32:83.99:1174,84,0	1/1:5,3:8:15.05:244,15,0
chr10	61294939	.	AT	A	12878.38	PASS	AB=1.000;AC=41;AF=0.732;AN=56;BaseQRankSum=12.889;DP=607;FS=14.455;HRun=6;HaplotypeScore=106.1325;InbreedingCoeff=0.9183;MQ=75.06;MQ0=0;MQRankSum=-6.800;QD=27.23;ReadPosRankSum=3.175;VQSLOD=3.6210;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,30:31:78.20:838,78,0	1/1:1,10:11:21.05:226,21,0	0/1:18,0:18:8.76:9,0,466	0/0:13,0:13:32.83:0,33,390	1/1:1,35:36:96.24:1030,96,0	0/0:20,0:20:54.18:0,54,710	0/0:16,0:16:48.15:0,48,618	0/0:20,0:20:54.18:0,54,710	1/1:1,21:22:60.15:644,60,0	1/1:1,32:33:96.21:1020,96,0	1/1:2,28:30:78.20:838,78,0	1/1:3,11:14:33.08:355,33,0	1/1:2,19:21:57.14:612,57,0	1/1:4,25:29:69.17:740,69,0	1/1:2,25:27:69.17:740,69,0	1/1:2,20:22:57.14:612,57,0	1/1:3,27:30:81.16:858,81,0	1/1:0,18:18:48.12:516,48,0	1/1:1,10:11:33.03:335,33,0	1/1:3,32:35:93.23:999,93,0	1/1:0,11:11:27.07:290,27,0	0/0:26,0:26:75.24:0,75,985	0/0:22,0:22:66.20:0,66,853	0/0:17,0:17:45.15:0,45,591	1/1:1,23:24:69.17:737,69,0	1/1:0,10:10:30.08:322,30,0	1/1:1,31:32:87.22:933,87,0	1/1:0,8:8:21.05:225,21,0
chr10	61295401	.	GGAAAACACAGATAAAGAGGTAGGAGCACTTAAAGA	G	30551.73	PASS	AB=0.841;AC=36;AF=0.667;AN=54;BaseQRankSum=13.191;DP=511;FS=2.588;HRun=0;HaplotypeScore=444.6968;InbreedingCoeff=0.7778;MQ=50.34;MQ0=3;MQRankSum=-9.550;QD=91.47;ReadPosRankSum=6.610;VQSLOD=2.4213;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:16,1:17:99:305,0,203	1/1:7,3:10:6.02:539,6,0	0/0:21,0:14:39.13:0,39,1800	0/0:12,0:10:18.04:0,18,1213	1/1:5,10:15:28.34:1799,28,0	0/0:26,0:26:63.20:0,63,7588	0/0:16,0:16:45.13:0,45,3621	0/0:24,0:23:63.22:0,63,4872	1/1:8,13:21:30.10:2675,30,0	1/1:6,14:20:39.13:2451,39,0	1/1:9,9:18:21.07:1873,21,0	1/1:6,3:9:9.03:809,9,0	1/1:14,15:29:30.10:2695,30,0	1/1:6,7:13:15.05:1348,15,0	1/1:10,9:19:12.04:1078,12,0	1/1:8,6:14:18.06:1618,18,0	1/1:11,3:14:12.04:525,12,0	0/1:9,5:14:79.52:695,0,80	1/1:6,8:12:24.06:1294,24,0	1/1:13,12:25:30.06:1964,30,0	./.	0/0:23,0:23:63.20:0,63,8162	0/0:32,0:32:90.31:0,90,10248	0/0:19,0:19:51.17:0,51,5776	1/1:9,9:18:21.07:1863,21,0	1/1:15,19:34:54.16:3784,54,0	1/1:16,10:26:30.10:2697,30,0	1/1:2,2:4:6.02:539,6,0
chr10	61296262	.	C	CA	2109.29	PASS	AB=0.881;AC=18;AF=0.321;AN=56;BaseQRankSum=-3.814;DP=664;FS=5.778;HRun=11;HaplotypeScore=87.2108;InbreedingCoeff=0.5595;MQ=71.63;MQ0=0;MQRankSum=0.424;QD=7.38;ReadPosRankSum=-2.089;VQSLOD=2.0847;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,5:35:14.73:0,15,461	0/1:13,1:14:0.56:1,0,179	0/0:18,0:18:24.10:0,24,160	0/0:31,0:29:34.77:0,35,231	0/0:39,2:41:33.84:0,34,612	1/1:5,14:19:27.05:274,27,0	1/1:2,7:9:12.02:122,12,0	0/1:18,1:30:6.95:103,0,7	0/0:24,0:26:45.79:0,46,336	0/1:23,3:26:34.60:35,0,310	0/0:25,0:28:60.80:0,61,453	0/0:16,0:16:10.60:0,11,230	0/1:36,1:37:1.67:2,0,415	0/0:16,2:18:8.39:0,8,248	0/0:24,0:24:22.50:0,23,323	0/0:16,1:18:16.41:0,16,301	0/0:11,0:11:23.89:0,24,186	1/1:4,17:21:26.84:274,27,0	0/1:18,2:20:26.76:27,0,159	0/0:35,1:38:20.90:0,21,562	0/0:11,0:11:26.11:0,26,178	1/1:5,19:26:53.70:494,54,0	1/1:7,29:36:63.12:634,63,0	1/1:1,11:14:32.89:319,33,0	0/0:27,0:29:67.72:0,68,514	0/1:26,5:33:15.61:16,0,423	0/0:19,3:22:20.30:0,20,341	0/0:5,0:7:19.02:0,19,128
chr10	61296702	.	A	AC	15768.94	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-14.311;DP=684;FS=6.122;HRun=5;HaplotypeScore=65.3741;InbreedingCoeff=0.9969;MQ=64.97;MQ0=0;MQRankSum=1.690;QD=32.58;ReadPosRankSum=5.757;VQSLOD=5.0723;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,19:24:59.56:754,60,0	1/1:0,12:12:30.10:395,30,0	0/0:26,0:23:51.08:0,51,521	0/0:26,0:25:66.16:0,66,703	1/1:3,25:28:69.22:907,69,0	0/0:21,0:21:57.12:0,57,603	0/0:19,0:19:54.11:0,54,564	0/0:35,0:35:99:0,99,1029	1/1:2,14:16:39.13:513,39,0	1/1:3,26:29:74.90:971,75,0	1/1:1,33:34:78.25:1022,78,0	1/1:3,22:25:60.20:789,60,0	1/1:0,12:12:24.08:316,24,0	1/1:1,28:29:75.24:984,75,0	1/1:2,26:28:72.23:947,72,0	1/1:4,27:31:78.25:1026,78,0	1/1:0,25:25:75.24:987,75,0	1/1:1,22:24:53.22:743,53,0	1/1:1,19:19:51.17:667,51,0	1/1:1,26:27:81.19:1034,81,0	1/1:3,23:26:53.15:852,53,0	0/0:26,0:26:78.20:0,78,838	0/0:24,0:24:72.17:0,72,766	0/0:22,0:23:59.14:0,59,606	1/1:2,17:19:36.12:474,36,0	1/1:1,25:26:72.21:929,72,0	1/1:4,40:44:96.27:1260,96,0	1/1:0,5:5:15.05:197,15,0
chr10	61297891	.	C	CT	17935.89	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=15.065;DP=564;FS=4.337;HRun=0;HaplotypeScore=81.1990;InbreedingCoeff=0.9990;MQ=64.30;MQ0=0;MQRankSum=-2.761;QD=43.01;ReadPosRankSum=7.807;VQSLOD=4.2947;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,13:13:36.12:562,36,0	1/1:0,8:8:21.07:336,21,0	0/0:19,0:13:39.13:0,39,545	0/0:20,0:20:54.17:0,54,725	1/1:0,23:23:60.20:957,60,0	0/0:13,0:13:39.13:0,39,546	0/0:9,0:9:27.09:0,27,377	0/0:37,0:37:99:0,105,1436	1/1:0,19:19:45.15:719,45,0	1/1:1,33:34:96.31:1490,96,0	1/1:0,37:37:99:1629,102,0	1/1:0,16:16:45.15:719,45,0	1/1:0,23:23:69.24:1103,69,0	1/1:0,19:19:51.17:815,51,0	1/1:1,12:13:36.12:575,36,0	1/1:0,16:15:45.15:719,45,0	1/1:0,20:20:51.17:813,51,0	1/1:1,25:26:72.25:1146,72,0	1/1:1,16:16:45.11:691,45,0	1/1:2,18:20:48.16:767,48,0	1/1:0,13:13:39.13:623,39,0	0/0:18,0:18:54.16:0,54,719	0/0:21,0:21:63.21:0,63,880	0/0:10,0:10:30.10:0,30,418	1/1:0,18:18:42.14:671,42,0	1/1:1,27:28:84.27:1300,84,0	1/1:2,20:22:57.19:911,57,0	1/1:1,31:32:87.30:1390,87,0
chr10	61298254	.	AG	A	13501	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=11.809;DP=518;FS=0.000;HRun=1;HaplotypeScore=51.8378;InbreedingCoeff=0.9896;MQ=60.76;MQ0=3;MQRankSum=3.118;QD=37.92;ReadPosRankSum=4.059;VQSLOD=5.0548;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,21:23:19.37:669,19,0	1/1:0,9:9:21.07:294,21,0	0/0:16,0:8:24.05:0,24,339	0/0:23,0:13:29.04:0,29,504	1/1:0,34:34:96.18:1275,96,0	0/0:30,0:30:90.29:0,90,1412	0/0:15,0:15:42.07:0,42,638	0/0:27,0:27:78.24:0,78,1185	1/1:0,14:14:42.14:587,42,0	1/1:0,20:20:57.16:760,57,0	1/1:0,25:25:72.20:984,72,0	1/1:0,17:17:45.15:629,45,0	1/1:0,19:19:57.19:796,57,0	1/1:0,15:15:42.14:584,42,0	1/1:0,17:17:42.14:587,42,0	1/1:0,13:13:36.12:503,36,0	1/1:0,23:23:60.20:831,60,0	1/1:0,10:10:27.09:377,27,0	1/1:0,11:11:30.10:414,30,0	1/1:0,29:29:81.24:1111,81,0	1/1:0,4:4:12.04:168,12,0	0/0:21,0:21:63.18:0,63,940	0/0:19,0:19:57.19:0,57,910	0/0:11,0:11:30.08:0,30,433	1/1:1,11:12:27.09:377,27,0	1/1:0,28:28:84.28:1173,84,0	1/1:0,28:28:84.28:1173,84,0	1/1:0,5:5:15.05:209,15,0
chr10	61298630	.	GA	G	11654.88	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=9.823;DP=544;FS=6.976;HRun=7;HaplotypeScore=72.2255;InbreedingCoeff=0.9530;MQ=60.72;MQ0=3;MQRankSum=1.056;QD=26.79;ReadPosRankSum=2.830;VQSLOD=5.6777;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,23:24:66.15:673,66,0	1/1:1,10:11:27.06:275,27,0	0/0:19,0:13:30.09:0,30,368	0/0:9,0:7:18.06:0,18,223	1/1:1,24:25:72.16:735,72,0	0/0:15,0:15:42.13:0,42,528	0/0:14,0:14:39.11:0,39,468	1/1:2,24:26:69.15:704,69,0	1/1:1,28:29:78.17:796,78,0	1/1:3,26:29:75.16:765,75,0	1/1:2,23:25:69.16:704,69,0	1/1:2,11:13:33.07:337,33,0	1/1:2,19:21:57.13:582,57,0	1/1:2,20:22:60.14:612,60,0	1/1:1,19:20:54.12:551,54,0	1/1:2,19:21:57.13:582,57,0	1/1:1,9:10:24.05:245,24,0	1/1:2,9:11:0.44:218,0,0	1/1:3,16:17:45.10:459,45,0	1/1:2,28:30:84.19:856,84,0	1/1:2,11:13:33.07:337,33,0	0/0:24,0:23:66.20:0,66,815	0/0:18,0:18:51.14:0,51,615	0/0:10,0:10:27.09:0,27,340	1/1:1,21:22:54.12:551,54,0	1/1:1,25:26:75.14:756,75,0	1/1:5,23:28:66.14:673,66,0	1/1:1,9:10:24.05:245,24,0
chr10	61301171	.	A	AT	14296.74	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-15.446;DP=595;FS=1.967;HRun=5;HaplotypeScore=55.2379;InbreedingCoeff=0.9696;MQ=70.10;MQ0=0;MQRankSum=-3.865;QD=33.96;ReadPosRankSum=3.592;VQSLOD=5.2199;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,14:16:39.08:494,39,0	1/1:1,1:2:3.01:39,3,0	0/0:21,0:20:59.32:0,59,600	0/0:16,0:16:42.05:0,42,421	1/1:2,27:29:81.22:1046,81,0	0/0:28,0:28:81.20:0,81,870	0/0:14,0:14:42.11:0,42,451	0/0:26,0:26:69.13:0,69,729	1/1:4,20:24:54.11:689,54,0	1/1:3,32:35:96.28:1233,96,0	1/1:1,22:23:57.19:750,57,0	1/1:2,16:18:45.15:592,45,0	1/1:1,19:20:51.17:671,51,0	1/1:0,17:17:51.17:671,51,0	1/1:3,21:24:54.18:710,54,0	1/1:0,14:14:42.14:553,42,0	1/1:1,17:18:51.17:671,51,0	1/1:4,18:22:54.18:710,54,0	1/1:2,15:17:48.16:631,48,0	1/1:5,42:47:99:1540,120,0	1/1:2,10:12:27.09:355,27,0	0/0:30,0:30:81.16:0,81,853	0/0:33,0:33:90.22:0,90,967	0/0:6,0:6:18.05:0,18,193	1/1:2,13:15:39.13:513,39,0	1/1:1,21:22:63.16:809,63,0	1/1:1,26:27:81.26:1065,81,0	1/1:4,14:18:42.14:553,42,0
chr10	61303044	.	TATG	T	138.36	PASS	AB=0.961;AC=11;AF=0.196;AN=56;BaseQRankSum=0.799;DP=764;FS=4.892;HRun=0;HaplotypeScore=108.5373;InbreedingCoeff=0.0149;MQ=21.71;MQ0=147;MQRankSum=0.366;QD=0.61;ReadPosRankSum=-2.328;VQSLOD=1.3752;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:18:8.97:0,9,99	0/0:9,0:5:2.94:0,3,60	0/0:60,0:8:18.06:0,18,381	0/0:76,0:5:15.05:0,15,260	0/0:22,0:15:6.40:0,6,49	1/1:18,2:16:7.70:75,8,0	0/1:29,1:24:57.09:57,0,93	0/0:53,0:23:51.81:0,52,837	0/0:26,2:19:0.11:0,0,14	0/0:35,0:21:22.51:0,23,523	0/0:22,0:13:5.89:0,6,70	0/0:24,0:17:13.25:0,13,145	0/1:20,1:17:28.83:29,0,136	0/0:29,0:21:9.75:0,10,46	0/1:21,2:13:8.60:9,0,15	0/1:17,0:16:5.15:5,0,140	0/1:27,1:19:47.57:48,0,138	0/1:10,1:8:32.03:32,0,111	0/0:26,0:14:24.04:0,24,259	0/0:18,0:14:3.48:0,3,60	0/1:44,0:23:0.65:1,0,14	0/0:18,4:13:5.75:0,6,32	0/0:16,0:11:4.36:0,4,31	1/1:32,1:23:2.12:14,2,0	0/0:17,1:10:5.91:0,6,38	0/0:34,0:14:20.79:0,21,286	0/0:10,0:6:5.60:0,6,37	0/0:7,0:2:2.96:0,3,19
chr10	61303047	.	G	GGT	688.06	PASS	AB=0.912;AC=20;AF=0.357;AN=56;BaseQRankSum=0.274;DP=763;FS=2.637;HRun=0;HaplotypeScore=106.8600;InbreedingCoeff=0.1067;MQ=21.56;MQ0=149;MQRankSum=-0.316;QD=1.96;ReadPosRankSum=-1.126;VQSLOD=2.1860;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,1:17:8.60:0,9,60	0/0:9,0:5:2.97:0,3,27	0/0:63,0:10:18.06:0,18,249	0/0:78,0:6:17.90:0,18,209	0/0:18,4:15:5.43:0,5,29	1/1:16,4:16:9.59:68,10,0	1/1:28,6:28:6.81:174,7,0	0/0:54,0:21:29.17:0,29,362	0/1:23,5:18:3.92:7,0,4	0/1:32,2:21:99:144,0,156	0/0:19,2:13:5.62:0,6,27	0/0:19,5:17:5.99:0,6,33	0/1:17,2:15:2.38:2,0,85	0/0:24,2:18:8.26:0,8,43	0/1:20,2:12:5.16:22,0,5	0/1:14,3:16:1.30:84,0,1	0/1:24,3:19:33.14:33,0,102	0/0:7,0:5:5.65:0,6,36	0/1:25,1:14:35.17:82,0,35	0/0:17,0:13:3.01:0,3,44	0/0:42,2:23:2.84:0,3,21	0/1:19,3:13:5.71:6,0,21	1/1:14,3:13:5.87:74,6,0	1/1:28,4:23:4.56:60,5,0	0/0:15,3:10:5.68:0,6,38	0/1:30,2:12:53.10:70,0,53	0/1:11,0:7:12.36:12,0,24	1/1:6,0:2:1.55:4,2,0
chr10	61303048	.	GTA	G	1157.95	PASS	AB=0.885;AC=24;AF=0.429;AN=56;BaseQRankSum=-1.680;DP=765;FS=4.668;HRun=0;HaplotypeScore=102.1510;InbreedingCoeff=-0.1851;MQ=21.63;MQ0=151;MQRankSum=-1.510;QD=2.61;ReadPosRankSum=-1.836;VQSLOD=1.8732;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:22,5:17:34.12:34,0,52	0/0:8,1:5:2.85:0,3,18	0/0:63,0:10:20.95:0,21,313	0/0:78,0:6:11.22:0,11,274	0/0:15,7:15:8.95:0,9,76	0/1:20,0:16:16.90:19,0,17	0/0:34,0:28:5.04:0,5,38	0/1:50,4:21:76.56:77,0,360	1/1:22,5:18:10.72:140,11,0	0/1:27,7:21:99:143,0,216	0/0:16,5:13:5.89:0,6,52	0/1:19,6:17:36.65:37,0,44	0/1:14,5:15:73.23:85,0,73	0/1:19,7:18:9.50:88,0,9	1/1:17,6:12:8.70:102,9,0	0/1:14,2:16:11.05:102,0,11	0/1:26,2:19:43.38:43,0,101	0/1:7,1:5:36.94:37,0,39	0/1:24,3:14:4.42:156,0,4	0/0:12,5:13:2.98:0,3,57	0/0:39,6:23:2.41:0,2,15	0/1:22,0:13:7.88:8,0,15	1/1:18,0:14:1.37:20,1,0	0/0:33,0:23:2.84:0,3,15	0/1:16,2:10:25.72:40,0,26	0/1:28,4:11:72.47:92,0,72	1/1:8,2:7:8.22:75,8,0	1/1:6,0:2:2.96:19,3,0
chr10	61303426	.	TG	T	8613.91	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=9.413;DP=413;FS=10.072;HRun=7;HaplotypeScore=64.6144;InbreedingCoeff=0.9957;MQ=92.42;MQ0=0;MQRankSum=-5.315;QD=28.06;ReadPosRankSum=3.438;VQSLOD=5.2419;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,10:10:30.07:306,30,0	1/1:0,7:7:18.04:184,18,0	0/0:16,0:16:43:0,43,493	0/0:25,0:25:71.78:0,72,845	1/1:0,21:20:54.12:551,54,0	0/0:27,0:27:72.23:0,72,906	0/0:10,0:10:30.10:0,30,377	1/1:5,18:23:54.12:551,54,0	1/1:1,14:15:42.10:428,42,0	1/1:0,21:21:63.10:627,63,0	1/1:0,17:17:51.12:520,51,0	1/1:0,10:10:27.06:275,27,0	1/1:1,12:13:36.08:367,36,0	1/1:2,13:15:39.09:398,39,0	1/1:0,17:17:48.11:489,48,0	1/1:1,9:10:27.06:275,27,0	1/1:1,16:17:45.10:459,45,0	1/1:1,10:11:30.07:306,30,0	1/1:0,11:11:33.08:337,33,0	1/1:1,10:11:30.07:306,30,0	1/1:0,14:14:36.08:367,36,0	0/0:10,0:10:27.09:0,27,339	0/0:11,0:11:33.11:0,33,415	0/0:7,0:7:18.06:0,18,226	1/1:1,26:27:75.17:765,75,0	1/1:1,16:17:48.11:490,48,0	1/1:0,11:11:33.08:337,33,0	1/1:0,9:9:27.06:275,27,0
chr10	61303851	.	CTT	C	1098.35	PASS	AC=2;AF=0.037;AN=54;BaseQRankSum=6.909;DP=311;FS=0.000;HRun=2;HaplotypeScore=36.5364;InbreedingCoeff=0.7384;MQ=72.77;MQ0=0;MQRankSum=0.214;QD=43.93;ReadPosRankSum=-3.371;VQSLOD=2.3881;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:39.13:0,39,792	0/0:3,0:3:9.03:0,9,183	0/0:9,0:9:8.17:0,8,411	0/0:5,0:5:15.05:0,15,304	0/0:19,0:19:57.20:0,57,1158	0/0:13,0:13:39.13:0,39,792	0/0:8,0:8:24.07:0,24,451	1/1:0,25:25:75.23:1193,75,0	0/0:5,0:5:15.05:0,15,305	0/0:18,0:18:54.19:0,54,1093	0/0:17,0:17:51.18:0,51,1036	0/0:7,0:7:21.06:0,21,391	0/0:7,0:7:21.07:0,21,427	0/0:9,0:9:27.09:0,27,548	0/0:10,0:10:30.10:0,30,610	0/0:6,0:6:18.06:0,18,366	0/0:17,0:17:51.17:0,51,1014	0/0:16,0:16:48.16:0,48,945	0/0:26,0:26:78.27:0,78,1580	0/0:12,0:12:36.12:0,36,732	0/0:2,0:2:6.02:0,6,122	./.	0/0:4,0:4:12.04:0,12,244	0/0:9,0:9:27.09:0,27,549	0/0:12,0:12:36.12:0,36,732	0/0:14,0:14:42.12:0,42,766	0/0:21,0:21:60.19:0,60,1183	0/0:4,0:4:12.04:0,12,241
chr10	61304286	.	C	CT	1407.28	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-2.469;DP=473;FS=2.377;HRun=2;HaplotypeScore=42.0692;InbreedingCoeff=0.9876;MQ=79.18;MQ0=0;MQRankSum=-3.838;QD=40.21;ReadPosRankSum=-3.509;VQSLOD=2.5005;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:60.03:0,60,719	0/0:8,0:8:24.08:0,24,312	0/0:14,0:14:39.13:0,39,503	0/0:10,0:10:30.07:0,30,368	0/0:21,0:21:63.20:0,63,818	0/0:14,0:14:42.12:0,42,529	0/0:14,0:14:42.12:0,42,530	1/1:2,33:35:99:1502,102,0	0/0:18,0:18:54.18:0,54,701	0/0:22,0:22:63.19:0,63,797	0/0:21,0:21:57.18:0,57,740	0/0:13,0:13:39.10:0,39,477	0/0:12,0:12:36.12:0,36,467	0/0:16,0:16:45.13:0,45,570	0/0:23,0:23:66.15:0,66,787	0/0:20,0:20:57.19:0,57,740	0/0:17,0:17:51.17:0,51,662	0/0:18,0:18:51.17:0,51,662	0/0:10,0:10:27.09:0,27,351	0/0:13,0:13:39.11:0,39,491	0/0:16,0:16:48.16:0,48,623	0/0:18,0:18:54.18:0,54,701	0/0:8,0:8:21.07:0,21,273	0/0:10,0:10:30.08:0,30,374	0/0:22,0:22:63.20:0,63,818	0/0:23,0:23:66.21:0,66,856	0/0:29,0:29:87.28:0,87,1128	0/0:7,0:7:21.05:0,21,257
chr10	61305590	.	GATAATAATAATAATAATAATAATAATAATAATAATTAATA	G	18772.43	PASS	AB=0.798;AC=19;AF=0.380;AN=50;BaseQRankSum=13.338;DP=463;FS=0.000;HRun=0;HaplotypeScore=508.4298;InbreedingCoeff=-0.4911;MQ=39.67;MQ0=4;MQRankSum=-3.203;QD=47.65;ReadPosRankSum=9.755;VQSLOD=0.9451;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:16,0:21:99:438,0,201	0/1:9,0:12:99:686,0,188	./.	./.	0/1:18,3:26:99:1175,0,242	0/0:5,0:11:12.04:0,12,1090	0/0:7,0:6:12.04:0,12,242	0/0:21,0:19:48.10:0,48,1397	0/1:12,1:13:99:166,0,172	0/1:27,1:28:99:1752,0,713	0/1:15,10:24:99:364,0,615	0/1:17,2:19:99:1196,0,299	0/1:16,9:25:99:551,0,478	0/1:17,1:18:99:494,0,494	0/1:18,13:31:99:364,0,455	0/1:10,0:22:99:1417,0,259	0/0:2,0:2:6.02:0,6,70	1/1:2,1:5:6.02:538,6,0	0/1:13,0:11:99:703,0,132	0/1:30,1:30:99:1566,0,593	./.	0/0:4,0:7:18.06:0,18,1033	0/0:7,0:11:30.04:0,30,1456	0/0:6,0:6:8.62:0,9,425	0/1:19,4:23:99:1641,0,292	0/1:11,2:31:99:2897,0,265	0/1:14,20:37:99:1825,0,336	0/1:5,2:13:99:999,0,114
chr10	61305591	.	ATAATAATAATAATAATAATAATAATAATAATAAT	A	20400.07	PASS	AB=0.935;AC=32;AF=0.667;AN=48;BaseQRankSum=9.797;DP=460;FS=20.078;HRun=0;HaplotypeScore=448.8152;InbreedingCoeff=0.5080;MQ=39.50;MQ0=4;MQRankSum=-2.210;QD=52.04;ReadPosRankSum=7.116;VQSLOD=1.4804;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:21:0.26:446,0,0	1/1:12,0:12:8.92:704,9,0	./.	./.	1/1:26,0:26:15.05:1130,15,0	0/0:10,0:10:12.04:0,12,818	0/0:7,0:6:11.92:0,12,112	0/0:21,0:19:36.11:0,36,605	0/1:12,0:12:89.08:191,0,89	0/1:20,7:27:99:1872,0,146	0/1:25,0:24:99:379,0,305	1/1:11,8:19:18.06:1541,18,0	1/1:22,3:25:12.50:814,13,0	0/1:17,1:18:99:561,0,247	1/1:28,3:31:12.02:579,12,0	1/1:22,0:22:18.06:1414,18,0	./.	1/1:5,0:5:6.02:463,6,0	1/1:10,3:11:9.03:754,9,0	1/1:22,9:30:30.08:2037,30,0	./.	0/0:7,0:7:18.05:0,18,765	0/0:11,0:11:24.08:0,24,1054	0/0:6,0:6:8.57:0,9,319	1/1:15,8:23:24.08:2065,24,0	1/1:31,0:31:36.12:2526,36,0	1/1:33,4:37:30.09:2027,30,0	1/1:13,0:13:15.01:897,15,0
chr10	61305594	.	ATAATAATAATAATAATAATAATAATAATAAT	A	18205.75	PASS	AC=36;AF=0.750;AN=48;BaseQRankSum=8.311;DP=421;FS=5.163;HRun=0;HaplotypeScore=402.5525;InbreedingCoeff=0.7635;MQ=39.39;MQ0=3;MQRankSum=-2.361;QD=50.85;ReadPosRankSum=5.673;VQSLOD=2.0971;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:16:5.98:417,6,0	1/1:11,0:11:9.03:643,9,0	./.	./.	1/1:23,0:23:15.05:1035,15,0	0/0:9,0:9:12.04:0,12,657	0/0:6,0:5:2.92:0,3,17	0/0:18,0:16:35.61:0,36,355	1/1:5,6:11:3.01:242,3,0	1/1:25,2:27:33.08:1720,33,0	1/1:24,1:24:9.02:465,9,0	1/1:18,0:18:18.06:1287,18,0	1/1:23,0:23:9.03:652,9,0	1/1:13,5:18:9.03:706,9,0	1/1:29,0:29:6.02:435,6,0	1/1:21,0:21:18.06:1291,18,0	./.	1/1:3,0:3:6.02:423,6,0	1/1:7,0:6:9.03:669,9,0	1/1:26,0:26:24.08:1663,24,0	./.	0/0:7,0:7:15.05:0,15,638	0/0:11,0:11:24.06:0,24,879	0/0:6,0:6:5.65:0,6,286	1/1:22,0:22:24.08:1721,24,0	1/1:29,0:29:36.12:2275,36,0	1/1:36,0:36:27.09:1747,27,0	1/1:12,0:12:15.01:817,15,0
chr10	61305624	.	AT	A	2210.06	PASS	AB=1.000;AC=39;AF=0.750;AN=52;BaseQRankSum=7.084;DP=249;FS=2.795;HRun=2;HaplotypeScore=170.3731;InbreedingCoeff=0.6779;MQ=58.84;MQ0=0;MQRankSum=-5.198;QD=10.68;ReadPosRankSum=6.131;VQSLOD=2.0302;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,0:6:5.97:53,6,0	1/1:3,0:3:7.45:46,7,0	0/0:7,0:6:11.24:0,11,126	0/1:2,0:2:5.29:5,0,13	1/1:8,0:8:14.25:136,14,0	0/0:14,0:14:28.80:0,29,327	0/0:3,0:3:9.03:0,9,131	1/1:0,16:16:48.13:603,48,0	1/1:7,0:7:2.37:8,2,0	1/1:10,0:10:27.59:187,28,0	1/1:12,0:12:5.38:41,5,0	1/1:10,0:10:15.65:104,16,0	1/1:12,0:12:6.81:22,7,0	1/1:7,0:7:8.38:68,8,0	1/1:16,0:16:4.59:15,5,0	1/1:12,0:12:15.67:106,16,0	./.	1/1:3,0:3:5.19:27,5,0	1/1:3,0:3:8.22:60,8,0	1/1:11,1:12:25.99:203,26,0	./.	0/0:3,0:3:6.12:0,6,52	0/0:8,0:8:13.10:0,13,120	0/0:3,0:3:5.60:0,6,86	1/1:12,0:12:23.10:185,23,0	1/1:20,0:20:32.38:234,32,0	1/1:27,0:27:23.91:186,24,0	1/1:9,0:9:9.89:90,10,0
chr10	61307779	.	AT	A	959.34	PASS	AB=0.909;AC=11;AF=0.196;AN=56;BaseQRankSum=6.877;DP=392;FS=7.774;HRun=8;HaplotypeScore=39.6994;InbreedingCoeff=0.8982;MQ=79.64;MQ0=0;MQRankSum=-0.008;QD=16.54;ReadPosRankSum=-1.082;VQSLOD=2.5329;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:78.21:0,78,916	0/0:8,0:8:21:0,21,225	0/0:14,0:14:23.82:0,24,237	0/1:9,1:10:6.61:7,0,192	0/0:9,0:9:24.05:0,24,268	1/1:0,9:9:21.03:203,21,0	1/1:1,8:9:24.04:232,24,0	0/0:39,0:38:96.29:0,96,1159	0/0:15,0:15:42.13:0,42,507	0/0:10,0:10:27.08:0,27,326	0/0:8,0:8:24.07:0,24,290	0/0:13,0:13:33.09:0,33,389	0/0:16,0:16:45.14:0,45,543	0/0:8,0:8:24.07:0,24,290	0/0:7,0:6:18.06:0,18,217	0/0:10,0:10:27.08:0,27,326	0/0:23,0:23:63.16:0,63,746	0/0:10,0:10:30.09:0,30,362	0/0:18,0:18:39.12:0,39,471	0/0:12,0:12:36.11:0,36,433	0/0:13,0:13:33.10:0,33,399	1/1:1,9:10:24.03:231,24,0	1/1:0,11:11:24.04:232,24,0	1/1:1,8:9:24.03:232,24,0	0/0:16,0:16:48.15:0,48,580	0/0:25,0:25:66.19:0,66,785	0/0:14,0:14:42.13:0,42,505	0/0:16,0:16:48.15:0,48,580
chr10	61307897	.	CCCCCT	C	773.13	PASS	AC=22;AF=0.550;AN=40;BaseQRankSum=0.440;DP=100;FS=16.944;HRun=0;HaplotypeScore=33.9867;InbreedingCoeff=0.5055;MQ=50.78;MQ0=6;MQRankSum=-1.748;QD=13.10;ReadPosRankSum=-0.345;VQSLOD=0.4123;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,2:10:14.18:131,14,0	./.	./.	0/0:8,0:2:5.86:0,6,36	1/1:4,3:7:6.02:75,6,0	0/0:2,0:2:3.01:0,3,74	0/0:5,0:5:3.01:0,3,35	1/1:20,0:16:29.34:256,29,0	1/1:0,2:2:6.02:75,6,0	1/1:1,0:1:0.89:2,1,0	./.	0/0:2,1:3:2.84:0,3,14	1/1:2,0:1:3.01:39,3,0	0/0:2,0:2:2.92:0,3,17	1/1:3,0:2:3:25,3,0	./.	./.	./.	1/1:3,0:2:3.01:37,3,0	./.	./.	0/0:1,0:1:3.01:0,3,32	0/0:4,0:4:9.03:0,9,143	0/0:2,0:2:2.96:0,3,19	0/0:1,0:1:3.01:0,3,60	1/1:4,0:4:5.60:37,6,0	1/1:2,2:4:12.02:148,12,0	1/1:1,1:2:6.02:83,6,0
chr10	61307900	.	C	CT	347.16	PASS	AB=1.000;AC=10;AF=0.217;AN=46;BaseQRankSum=-1.268;DP=90;FS=6.358;HRun=0;HaplotypeScore=30.4637;InbreedingCoeff=0.1365;MQ=51.45;MQ0=4;MQRankSum=-1.703;QD=8.47;ReadPosRankSum=-0.326;VQSLOD=2.0346;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:9,0:8:4.95:5,0,36	./.	./.	0/0:8,0:2:4.54:0,5,27	0/1:5,0:5:8.14:8,0,15	0/0:2,0:2:6.01:0,6,67	0/0:4,0:4:2.98:0,3,21	1/1:8,9:15:28.89:408,29,0	0/0:2,0:2:5.91:0,6,40	0/0:1,0:1:2.74:0,3,12	0/0:2,0:1:3:0,3,25	0/0:3,0:3:2.80:0,3,13	1/1:2,0:1:2.80:13,3,0	0/0:1,0:1:2.96:0,3,19	0/0:3,0:2:2.68:0,3,11	0/0:2,0:2:3.28:0,3,9	./.	./.	1/1:2,0:1:2.94:18,3,0	./.	0/0:2,0:1:2.97:0,3,20	0/0:1,0:1:3.01:0,3,39	0/0:4,0:4:9.03:0,9,126	0/0:2,0:2:2.94:0,3,18	0/0:1,0:1:3.01:0,3,42	0/0:4,0:4:4.31:0,4,14	0/1:4,0:4:3.16:3,0,26	0/1:2,0:2:7.20:7,0,7
chr10	61307911	.	CCG	C	295.04	PASS	AB=0.750;AC=24;AF=0.857;AN=28;BaseQRankSum=0.539;DP=45;FS=0.000;HRun=0;HaplotypeScore=32.6545;InbreedingCoeff=0.2102;MQ=60.01;MQ0=1;MQRankSum=-1.378;QD=8.68;ReadPosRankSum=-0.180;VQSLOD=2.3325;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,2:3:2.99:23,3,0	./.	./.	0/0:5,0:2:1.55:0,2,4	1/1:1,1:2:2.97:20,3,0	./.	1/1:1,0:1:2.22:7,2,0	1/1:5,5:10:15:133,15,0	1/1:0,2:2:5.88:37,6,0	./.	1/1:0,2:1:2.84:14,3,0	./.	./.	./.	./.	0/1:2,0:2:0.29:0,0,0	./.	./.	./.	./.	./.	./.	1/1:2,0:2:3:27,3,0	1/1:2,0:2:5.42:26,5,0	0/1:0,0:1:0:0,0,0	1/1:3,0:3:2.74:12,3,0	1/1:0,2:2:5.96:45,6,0	1/1:0,1:1:3:26,3,0
chr10	61307912	.	CG	C	227.36	PASS	AB=1.000;AC=27;AF=0.964;AN=28;BaseQRankSum=-0.578;DP=33;FS=0.000;HRun=1;HaplotypeScore=29.6543;InbreedingCoeff=0.0675;MQ=68.36;MQ0=0;MQRankSum=-1.589;QD=7.58;ReadPosRankSum=0.722;VQSLOD=0.5989;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:3:5.67:36,6,0	./.	./.	0/1:4,0:2:0.01:1,0,0	1/1:1,0:1:2.50:9,2,0	./.	1/1:0,1:1:3:26,3,0	1/1:5,1:6:13.04:51,13,0	1/1:2,0:2:5.36:21,5,0	./.	1/1:2,0:1:2.84:14,3,0	./.	./.	./.	./.	1/1:1,1:2:3.28:9,3,0	./.	./.	./.	./.	./.	./.	1/1:0,1:1:3.01:40,3,0	1/1:1,1:2:5.72:30,6,0	1/1:1,0:1:2.97:20,3,0	1/1:1,0:1:2.74:12,3,0	1/1:2,0:2:5.36:21,5,0	1/1:1,0:1:2.68:11,3,0
chr10	61307931	.	TCA	T	61.94	PASS	AC=12;AF=1.000;AN=12;DP=7;FS=0.000;HRun=0;HaplotypeScore=27.6336;MQ=27.61;MQ0=0;QD=10.32;VQSLOD=2.8199;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,1:1:3.01:30,3,0	./.	./.	./.	./.	./.	./.	./.	1/1:0,1:1:3.01:30,3,0	./.	1/1:0,1:1:3.01:32,3,0	./.	./.	./.	./.	./.	./.	./.	./.	1/1:0,1:1:0.89:2,1,0	./.	./.	./.	1/1:0,1:1:2.84:14,3,0	./.	./.	1/1:0,1:1:2.98:21,3,0	./.
chr10	61311153	.	ATG	A	155.99	PASS	AB=1.000;AC=13;AF=0.591;AN=22;BaseQRankSum=1.479;DP=38;FS=0.000;HRun=0;HaplotypeScore=19.6133;InbreedingCoeff=0.5087;MQ=83.77;MQ0=3;MQRankSum=-1.648;QD=7.80;ReadPosRankSum=-0.211;VQSLOD=2.3486;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,0:1:2.99:24,3,0	./.	./.	0/0:5,0:2:2.76:0,3,21	./.	0/0:6,0:6:12.02:0,12,167	0/0:2,0:2:6.01:0,6,83	1/1:0,4:4:11.93:90,12,0	0/1:1,0:1:0:0,0,0	./.	0/1:1,0:1:0:0,0,0	./.	0/1:1,0:1:0:0,0,0	./.	./.	./.	1/1:4,0:4:9.45:72,9,0	1/1:4,0:4:5.93:40,6,0	./.	./.	./.	./.	./.	./.	./.	./.	./.	1/1:4,0:2:2.99:24,3,0
chr10	61314176	.	CGTGTGTGTGTGTGTGTGT	C	2540.39	PASS	AB=0.700;AC=25;AF=0.521;AN=48;BaseQRankSum=5.112;DP=442;FS=64.973;HRun=0;HaplotypeScore=193.8900;InbreedingCoeff=0.4954;MQ=70.16;MQ0=5;MQRankSum=-4.412;QD=13.16;ReadPosRankSum=-0.911;VQSLOD=0.2957;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:9.01:0,9,113	./.	./.	./.	0/0:24,0:24:3:0,3,25	0/0:13,0:13:9.03:0,9,353	0/0:15,0:15:14.12:0,14,600	0/0:25,0:23:3.01:0,3,38	1/1:18,0:21:9.03:136,9,0	1/1:18,0:18:0.62:25,1,0	1/1:10,3:14:9.03:415,9,0	1/1:8,3:10:8.35:433,8,0	1/1:9,4:13:6.02:289,6,0	1/1:11,0:11:3:25,3,0	0/0:14,0:14:0:0,0,0	1/1:15,5:20:9.03:434,9,0	1/1:17,0:17:3.01:111,3,0	0/0:10,0:11:5.46:0,5,122	./.	1/1:9,5:14:3.01:145,3,0	1/1:22,0:19:2.99:25,3,0	0/0:14,0:16:5.98:0,6,134	0/0:11,0:10:6.02:0,6,160	0/0:23,0:22:24.06:0,24,832	1/1:8,3:11:3.01:145,3,0	0/0:13,0:13:3.69:0,4,9	1/1:9,5:14:9.03:434,9,0	0/1:4,0:6:15.96:80,0,16
chr10	61314308	.	AAG	A	5947.82	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=3.848;DP=381;FS=20.355;HRun=0;HaplotypeScore=100.5302;InbreedingCoeff=0.8784;MQ=77.44;MQ0=2;MQRankSum=-8.685;QD=26.20;ReadPosRankSum=1.726;VQSLOD=4.4592;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,14:19:39.12:487,39,0	1/1:1,5:6:18.06:224,18,0	0/0:39,0:32:42.35:0,42,772	0/0:36,0:29:46.98:0,47,727	1/1:2,15:17:41.92:472,42,0	0/0:12,0:12:36.10:0,36,556	0/0:15,0:15:39.13:0,39,642	1/1:8,0:13:25.48:138,25,0	1/1:1,8:9:24.08:300,24,0	1/1:6,7:13:24.08:300,24,0	1/1:6,11:17:11.23:387,11,0	1/1:4,4:8:12.04:150,12,0	1/1:1,9:10:27.08:337,27,0	1/1:3,12:15:36.07:432,36,0	1/1:2,12:15:38.95:464,39,0	1/1:0,8:8:24.08:300,24,0	1/1:2,1:3:6.02:74,6,0	1/1:4,1:5:3.01:37,3,0	1/1:8,5:13:24.04:273,24,0	1/1:2,16:18:27.17:540,27,0	1/1:1,5:5:9.03:113,9,0	0/0:12,0:12:30.10:0,30,495	0/0:14,0:14:30.10:0,30,482	0/0:26,0:26:60.21:0,60,989	1/1:1,2:3:6.02:75,6,0	1/1:5,6:11:21.07:262,21,0	1/1:3,13:16:45.12:546,45,0	1/1:0,1:1:3.01:38,3,0
chr10	61314481	.	T	TCACA	1246.86	PASS	AB=1.000;AC=33;AF=0.917;AN=36;BaseQRankSum=0.092;DP=179;FS=0.000;HRun=0;HaplotypeScore=52.2962;InbreedingCoeff=0.1409;MQ=42.64;MQ0=17;MQRankSum=-0.535;QD=11.76;ReadPosRankSum=-0.277;VQSLOD=2.3177;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,0:9:8.99:135,9,0	./.	./.	./.	1/1:7,3:10:2.89:71,3,0	1/1:6,0:8:5.75:64,6,0	1/1:8,0:8:0.89:2,1,0	./.	0/0:7,0:7:6.01:0,6,62	1/1:3,3:7:12.03:201,12,0	1/1:5,0:5:9.03:149,9,0	./.	./.	./.	1/1:1,0:1:3:25,3,0	1/1:2,0:2:3.01:50,3,0	1/1:3,0:3:2.74:12,3,0	0/1:5,0:5:20.83:21,0,118	1/1:6,0:7:3.90:55,4,0	1/1:7,0:7:9.03:186,9,0	1/1:3,3:5:6.02:103,6,0	./.	./.	1/1:9,0:9:3.01:48,3,0	./.	1/1:11,0:11:6.29:39,6,0	1/1:3,0:3:9.03:159,9,0	1/1:3,0:3:2.99:24,3,0
chr10	61314778	.	AC	A	1192.92	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.708;DP=501;FS=3.066;HRun=2;HaplotypeScore=60.6291;InbreedingCoeff=0.9827;MQ=84.10;MQ0=0;MQRankSum=-0.881;QD=34.08;ReadPosRankSum=-4.411;VQSLOD=2.0910;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:54.05:0,54,689	0/0:9,0:9:27.07:0,27,368	0/0:20,0:20:57.11:0,57,773	0/0:17,0:19:21.91:0,22,349	0/0:22,0:22:60.10:0,60,815	0/0:27,0:27:78.19:0,78,1046	0/0:14,0:14:39.07:0,39,473	1/1:0,35:35:99:1288,105,0	0/0:18,0:18:54.17:0,54,756	0/0:23,0:23:69.14:0,69,869	0/0:15,0:15:42.12:0,42,578	0/0:16,0:16:48.16:0,48,686	0/0:18,0:18:54.18:0,54,775	0/0:15,0:15:45.12:0,45,610	0/0:19,0:19:54.17:0,54,760	0/0:19,0:19:57.17:0,57,784	0/0:22,0:22:60.19:0,60,846	0/0:17,0:17:51.10:0,51,670	0/0:20,0:20:60.12:0,60,787	0/0:16,0:16:48.15:0,48,671	0/0:13,0:13:39.11:0,39,541	0/0:15,0:15:45.04:0,45,563	0/0:10,0:10:21.07:0,21,301	0/0:21,0:21:63.18:0,63,869	0/0:6,0:6:18.06:0,18,258	0/0:15,0:15:45.14:0,45,630	0/0:30,0:29:90.29:0,90,1273	0/0:9,0:9:27.06:0,27,351
chr10	61315095	.	TA	T	767.06	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=8.639;DP=552;FS=3.381;HRun=8;HaplotypeScore=55.6387;InbreedingCoeff=0.9332;MQ=80.78;MQ0=0;MQRankSum=-2.959;QD=22.56;ReadPosRankSum=-3.920;VQSLOD=2.3863;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:54.17:0,54,652	0/0:10,0:10:30.09:0,30,362	0/0:16,0:16:10.25:0,10,399	0/0:13,0:13:19.89:0,20,214	0/0:27,0:27:75.23:0,75,904	0/0:26,0:27:78.11:0,78,921	0/0:9,0:9:24.05:0,24,277	1/1:4,30:34:90.12:862,90,0	0/0:15,0:15:45.13:0,45,532	0/0:26,0:26:69.21:0,69,833	0/0:29,0:29:81.24:0,81,965	0/0:19,0:19:54.16:0,54,641	0/0:20,0:21:60.03:0,60,691	0/0:17,0:17:48.14:0,48,571	0/0:13,0:13:39.11:0,39,461	0/0:25,0:25:72.22:0,72,870	0/0:17,0:17:45.14:0,45,542	0/0:9,0:9:24.06:0,24,277	0/0:20,0:20:54.16:0,54,644	0/0:32,0:32:84.25:0,84,1005	0/0:18,0:18:48.15:0,48,580	0/0:17,0:17:48.15:0,48,580	0/0:20,0:20:54.12:0,54,608	0/0:8,0:8:18.06:0,18,217	0/0:13,0:13:30.09:0,30,362	0/0:35,0:35:90.26:0,90,1070	0/0:38,0:37:96.25:0,96,1133	0/0:6,0:6:18.04:0,18,206
chr10	61315680	.	A	AT	639.35	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=0.327;DP=552;FS=9.087;HRun=7;HaplotypeScore=50.3017;InbreedingCoeff=0.9645;MQ=71.76;MQ0=0;MQRankSum=-0.465;QD=24.59;ReadPosRankSum=-4.893;VQSLOD=1.2575;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:63.06:0,63,595	0/0:6,0:6:18.03:0,18,174	0/0:8,0:8:21:0,21,195	0/0:7,0:7:17.24:0,17,150	0/0:31,0:31:87.13:0,87,840	0/0:26,0:26:63.08:0,63,603	0/0:14,0:14:33.05:0,33,319	1/1:5,21:26:63.15:734,63,0	0/0:13,0:13:33.05:0,33,319	0/0:34,0:34:87.13:0,87,840	0/0:25,0:25:63.10:0,63,608	0/0:9,0:9:27.04:0,27,261	0/0:16,0:16:48.08:0,48,464	0/0:22,0:22:63.10:0,63,608	0/0:14,0:14:17.37:0,17,352	0/0:21,0:21:60.10:0,60,579	0/0:17,0:17:48.08:0,48,463	0/0:9,0:9:21.03:0,21,203	0/0:31,0:31:81.12:0,81,782	0/0:28,0:28:84.14:0,84,811	0/0:18,0:18:45.07:0,45,435	0/0:18,0:18:54.06:0,54,510	0/0:24,0:24:72.12:0,72,695	0/0:13,0:13:39.05:0,39,370	0/0:27,0:27:78.12:0,78,753	0/0:21,0:21:54.07:0,54,517	0/0:24,0:23:69.09:0,69,660	0/0:27,0:27:78.13:0,78,753
chr10	61316454	.	T	TG	391.17	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.835;DP=522;FS=13.277;HRun=1;HaplotypeScore=59.6708;InbreedingCoeff=0.9956;MQ=90.69;MQ0=0;MQRankSum=-6.812;QD=19.56;ReadPosRankSum=-3.051;VQSLOD=1.9735;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:60.18:0,60,765	0/0:8,0:8:24.08:0,24,311	0/0:22,0:23:54.18:0,54,701	0/0:19,0:19:56.74:0,57,638	0/0:26,0:26:75.21:0,75,944	0/0:24,0:24:72.20:0,72,894	0/0:10,0:10:27.07:0,27,335	1/1:12,8:20:33.86:486,34,0	0/0:18,0:18:54.18:0,54,700	0/0:24,0:24:72.21:0,72,889	0/0:22,0:22:63.20:0,63,817	0/0:16,0:16:48.16:0,48,623	0/0:11,0:11:30.10:0,30,389	0/0:15,0:15:45.15:0,45,584	0/0:24,0:24:72.22:0,72,920	0/0:15,0:15:42.14:0,42,545	0/0:20,0:20:54.14:0,54,670	0/0:13,0:13:33.11:0,33,423	0/0:23,0:23:63.19:0,63,793	0/0:37,0:37:99:0,108,1387	0/0:13,0:13:39.11:0,39,491	0/0:18,0:18:51.17:0,51,662	0/0:21,0:21:63.15:0,63,784	0/0:14,0:14:42.12:0,42,530	0/0:22,0:22:66.21:0,66,856	0/0:21,0:21:63.19:0,63,805	0/0:14,0:14:42.14:0,42,545	0/0:11,0:11:33.09:0,33,412
chr10	61316457	.	T	TTGAA	876.32	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.187;DP=525;FS=7.616;HRun=0;HaplotypeScore=90.7929;InbreedingCoeff=0.9928;MQ=90.71;MQ0=0;MQRankSum=-6.320;QD=62.59;ReadPosRankSum=-2.141;VQSLOD=4.7225;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:60.19:0,60,1148	0/0:8,0:8:24.08:0,24,461	0/0:22,0:22:57.14:0,57,974	0/0:20,0:20:56.93:0,57,934	0/0:27,0:27:81.23:0,81,1462	0/0:23,0:23:69.21:0,69,1308	0/0:8,0:8:21.07:0,21,419	1/1:6,8:14:42.14:971,42,0	0/0:19,0:19:57.18:0,57,1097	0/0:26,0:26:75.21:0,75,1329	0/0:22,0:22:63.22:0,63,1251	0/0:16,0:16:48.14:0,48,890	0/0:11,0:11:33.08:0,33,588	0/0:16,0:16:48.15:0,48,904	0/0:24,0:24:69.24:0,69,1368	0/0:15,0:15:45.13:0,45,831	0/0:21,0:21:57.17:0,57,1057	0/0:13,0:13:30.07:0,30,538	0/0:22,0:22:66.20:0,66,1206	0/0:36,0:36:99:0,105,2028	0/0:13,0:13:39.13:0,39,745	0/0:19,0:19:54.18:0,54,1044	0/0:21,0:21:60.10:0,60,1119	0/0:15,0:15:42.14:0,42,820	0/0:23,0:23:66.22:0,66,1285	0/0:21,0:21:63.21:0,63,1225	0/0:16,0:16:48.14:0,48,888	0/0:11,0:11:33.08:0,33,619
chr10	61316476	.	GT	G	243.93	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.741;DP=524;FS=4.577;HRun=10;HaplotypeScore=56.3790;InbreedingCoeff=0.7143;MQ=83.89;MQ0=0;MQRankSum=-4.881;QD=14.35;ReadPosRankSum=-1.735;VQSLOD=3.3451;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:42.11:0,42,465	0/0:6,0:6:15.04:0,15,161	0/0:15,1:16:7.02:0,7,293	0/0:16,0:16:16.28:0,16,278	0/0:31,0:31:87.22:0,87,953	0/0:22,0:22:63.17:0,63,696	0/0:11,0:11:33.09:0,33,362	1/1:3,14:17:38.99:338,39,0	0/0:18,0:18:39.11:0,39,431	0/0:26,0:26:72.19:0,72,796	0/0:27,0:27:66.18:0,66,726	0/0:15,0:15:42.98:0,43,458	0/0:11,0:11:24.06:0,24,265	0/0:13,1:14:0.99:0,1,227	0/0:19,0:19:42.11:0,42,465	0/0:14,0:14:42.11:0,42,465	0/0:18,0:18:48.11:0,48,521	0/0:12,0:12:36.07:0,36,386	0/0:22,0:22:45.09:0,45,475	0/0:39,0:42:99:0,108,1125	0/0:12,0:12:36.10:0,36,398	0/0:22,0:22:57.15:0,57,623	0/0:22,0:21:54.15:0,54,597	0/0:16,0:16:45.12:0,45,497	0/0:23,2:24:11.06:0,11,579	0/0:23,0:23:63.16:0,63,688	0/0:16,1:17:25.09:0,25,505	0/0:11,0:11:27.06:0,27,288
chr10	61316565	.	TAA	T	1017.25	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.014;DP=452;FS=6.490;HRun=4;HaplotypeScore=58.0877;InbreedingCoeff=0.9815;MQ=78.12;MQ0=0;MQRankSum=-4.842;QD=35.08;ReadPosRankSum=-2.887;VQSLOD=2.4384;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:42.12:0,42,724	0/0:7,0:7:21.07:0,21,393	0/0:16,0:16:45.13:0,45,780	0/0:13,0:13:38.92:0,39,627	0/0:25,0:25:72.24:0,72,1306	0/0:15,0:15:45.15:0,45,843	0/0:16,0:16:45.13:0,45,747	1/1:3,26:29:78.22:1112,78,0	0/0:16,0:16:48.16:0,48,884	0/0:28,0:28:81.27:0,81,1486	0/0:12,0:12:33.09:0,33,551	0/0:13,0:13:39.13:0,39,726	0/0:10,0:10:27.09:0,27,506	0/0:15,0:15:45.15:0,45,805	0/0:14,0:14:42.14:0,42,776	0/0:15,0:15:45.15:0,45,824	0/0:11,0:10:27.09:0,27,505	0/0:7,0:7:18.06:0,18,329	0/0:21,0:21:63.19:0,63,1083	0/0:22,0:22:57.19:0,57,1018	0/0:12,0:12:36.10:0,36,596	0/0:18,0:18:51.13:0,51,916	0/0:21,0:21:57.19:0,57,1047	0/0:12,0:12:36.11:0,36,643	0/0:17,0:17:45.15:0,45,829	0/0:18,0:18:54.18:0,54,980	0/0:28,0:28:81.23:0,81,1441	0/0:7,0:7:21.07:0,21,392
chr10	61316855	.	TAC	T	95.35	PASS	AB=1.000;AC=24;AF=0.600;AN=40;BaseQRankSum=1.934;DP=291;FS=1.485;HRun=0;HaplotypeScore=62.2180;InbreedingCoeff=0.4625;MQ=67.42;MQ0=14;MQRankSum=1.537;QD=0.94;ReadPosRankSum=2.910;VQSLOD=1.4633;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:13,0:12:0:0,0,0	./.	./.	./.	./.	0/0:25,0:23:5.31:0,5,28	0/0:15,0:14:14.73:0,15,106	0/0:27,0:25:15.64:0,16,95	0/1:4,0:4:0:0,0,0	0/1:8,0:8:0:0,0,0	0/1:9,0:9:0:0,0,0	1/1:6,2:7:4.43:20,4,0	1/1:3,0:3:2.80:13,3,0	1/1:1,1:2:2.90:16,3,0	./.	1/1:6,2:8:5.81:31,6,0	1/1:6,0:9:2.92:17,3,0	1/1:5,0:7:5.06:21,5,0	1/1:9,0:9:5.74:30,6,0	./.	1/1:7,2:9:2.90:16,3,0	0/0:11,0:10:0:0,0,0	0/0:19,0:18:7.72:0,8,44	0/0:13,0:10:2.72:0,3,25	./.	1/1:5,0:5:5.83:33,6,0	1/1:5,0:6:2.94:18,3,0	./.
chr10	61316887	.	CACACACACATATAT	C	1027.49	PASS	AB=0.986;AC=21;AF=0.404;AN=52;BaseQRankSum=4.464;DP=276;FS=4.304;HRun=0;HaplotypeScore=96.6191;InbreedingCoeff=-0.1203;MQ=40.24;MQ0=15;MQRankSum=2.670;QD=6.50;ReadPosRankSum=0.308;VQSLOD=1.4999;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:17,0:16:56.81:57,0,66	0/0:3,0:3:2.92:0,3,17	./.	0/0:6,0:1:3.01:0,3,38	0/0:12,0:12:0:0,0,0	0/1:19,0:17:60.56:66,0,61	0/1:14,0:16:99:111,0,403	0/0:33,0:28:65.88:0,66,1129	0/0:3,0:3:6:0,6,51	0/0:7,0:7:9.83:0,10,120	0/0:6,0:6:2.88:0,3,24	1/1:5,0:3:6:60,6,0	1/1:5,0:5:2.94:18,3,0	1/1:5,0:5:2.62:35,3,0	1/1:4,0:3:2.92:17,3,0	0/1:6,0:6:13.42:99,0,13	0/1:12,0:10:32.73:80,0,33	0/0:16,0:15:28.38:0,28,490	0/1:9,0:9:18.36:110,0,18	0/1:10,0:10:18.95:57,0,19	0/1:6,0:6:14.97:50,0,15	0/0:8,0:7:0:0,0,0	0/1:21,0:20:9.94:10,0,185	0/0:10,0:9:2.77:0,3,98	./.	1/1:1,4:5:12.01:180,12,0	0/1:11,0:11:29.32:73,0,29	0/1:6,0:5:21.27:148,0,21
chr10	61316889	.	CACACACATAT	C	1774.27	PASS	AB=0.829;AC=32;AF=0.615;AN=52;BaseQRankSum=2.399;DP=267;FS=18.301;HRun=0;HaplotypeScore=82.3228;InbreedingCoeff=0.2076;MQ=39.89;MQ0=15;MQRankSum=4.261;QD=10.14;ReadPosRankSum=1.529;VQSLOD=0.4236;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:17,0:16:33.11:33,0,42	0/0:3,0:3:0:0,0,0	./.	0/0:5,0:1:2.94:0,3,18	0/1:3,0:12:0:0,0,0	0/1:12,0:16:44.29:51,0,44	0/1:14,0:16:63.07:63,0,318	0/0:35,0:30:68.95:0,69,893	0/0:3,0:3:0.47:0,0,1	0/1:7,0:7:36.30:36,0,41	1/1:2,4:6:0.47:1,0,0	1/1:5,0:3:6.02:109,6,0	1/1:1,4:5:3.01:100,3,0	1/1:5,0:5:2.75:61,3,0	1/1:4,0:3:3.01:43,3,0	1/1:5,0:5:12.02:184,12,0	1/1:10,0:8:12.04:171,12,0	0/0:15,0:14:6.15:0,6,324	1/1:2,6:8:18.01:335,18,0	1/1:10,0:10:3.01:39,3,0	1/1:4,0:4:6.02:108,6,0	0/0:6,0:6:0:0,0,0	0/1:15,0:19:14.23:14,0,119	0/0:12,0:9:2.55:0,3,73	./.	1/1:5,0:5:12.04:205,12,0	1/1:11,0:11:8.16:144,8,0	1/1:6,0:5:15.05:217,15,0
chr10	61316895	.	CAT	C	578.06	PASS	AB=0.900;AC=31;AF=0.775;AN=40;BaseQRankSum=3.645;DP=251;FS=11.136;HRun=0;HaplotypeScore=70.9743;InbreedingCoeff=0.2239;MQ=40.58;MQ0=13;MQRankSum=3.280;QD=3.28;ReadPosRankSum=-1.060;VQSLOD=0.0327;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:8,8:14:2.92:17,3,0	./.	./.	./.	0/1:12,0:12:0:0,0,0	1/1:18,0:16:5.13:24,5,0	1/1:17,0:16:5.99:44,6,0	0/0:28,0:24:29.24:0,29,170	./.	0/1:4,0:7:10.12:17,0,10	./.	./.	1/1:5,0:5:2.84:14,3,0	0/0:2,0:5:0:0,0,0	1/1:3,0:2:2.98:21,3,0	1/1:4,0:4:2.96:19,3,0	1/1:12,0:11:14.83:100,15,0	0/1:16,0:15:10.98:11,0,84	1/1:9,0:9:17.69:118,18,0	1/1:9,0:9:2.96:19,3,0	1/1:4,0:4:2.98:22,3,0	0/0:6,0:5:0:0,0,0	1/1:18,0:17:2.22:7,2,0	./.	./.	1/1:5,0:5:5.91:39,6,0	1/1:11,0:11:5.97:45,6,0	1/1:10,0:8:23.81:169,24,0
chr10	61317403	.	TCTC	T	5234.31	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=11.650;DP=524;FS=1.282;HRun=0;HaplotypeScore=88.8442;InbreedingCoeff=0.9734;MQ=82.00;MQ0=0;MQRankSum=-5.256;QD=40.58;ReadPosRankSum=0.125;VQSLOD=5.4707;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:99:0,99,2156	0/0:3,0:3:9.03:0,9,176	0/0:27,0:27:63.01:0,63,1200	0/0:23,0:22:56.41:0,56,1111	0/0:28,0:28:84.29:0,84,1875	1/1:1,22:23:60.15:949,60,0	1/1:0,22:22:63.17:999,63,0	1/1:7,24:31:66.21:1037,66,0	0/0:18,0:18:48.16:0,48,1067	0/0:16,0:16:48.15:0,48,1029	0/0:17,0:17:51.16:0,51,1071	0/0:11,0:11:30.10:0,30,670	0/0:14,0:14:42.12:0,42,817	0/0:16,0:16:48.16:0,48,1018	0/0:20,0:20:54.19:0,54,1201	0/0:16,0:16:48.16:0,48,1072	0/0:19,0:19:54.18:0,54,1175	0/0:3,0:3:8.99:0,9,154	0/0:19,0:19:54.19:0,54,1181	0/0:15,0:15:45.15:0,45,979	0/0:27,0:27:72.25:0,72,1577	1/1:0,17:17:48.16:784,48,0	1/1:1,19:20:45.15:730,45,0	1/1:0,16:16:45.15:735,45,0	0/0:14,0:14:39.13:0,39,820	0/0:26,0:26:72.16:0,72,1090	0/0:24,0:24:66.23:0,66,1472	0/0:6,0:6:15.03:0,15,256
chr10	61317412	.	TCCCAC	T	845.18	PASS	AB=0.605;AC=3;AF=0.054;AN=56;BaseQRankSum=2.491;DP=503;FS=2.012;HRun=0;HaplotypeScore=122.6659;InbreedingCoeff=0.4853;MQ=78.84;MQ0=0;MQRankSum=-0.356;QD=30.19;ReadPosRankSum=2.307;VQSLOD=3.6889;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:84.29:0,84,2406	0/0:2,0:2:6.02:0,6,181	0/0:25,0:25:66.21:0,66,1734	0/0:21,0:20:35.72:0,36,1013	0/0:29,0:29:87.30:0,87,2552	0/0:25,0:24:68.26:0,68,1265	0/0:23,0:23:63.21:0,63,1179	0/0:24,0:24:48.09:0,48,843	0/0:18,0:18:45.15:0,45,1311	0/0:16,0:16:39.13:0,39,1165	0/0:16,0:16:48.16:0,48,1447	0/0:11,0:11:30.10:0,30,877	0/0:15,0:15:42.14:0,42,1207	0/0:16,0:16:48.16:0,48,1416	0/0:17,0:17:48.16:0,48,1438	0/0:16,0:16:42.14:0,42,1225	0/0:18,0:18:51.18:0,51,1518	0/0:3,0:3:9.03:0,9,271	0/0:18,0:18:51.18:0,51,1431	0/0:18,0:18:51.18:0,51,1452	0/0:23,0:23:57.20:0,57,1664	0/0:18,0:18:51.17:0,51,928	0/0:20,0:20:42.14:0,42,740	0/0:17,0:17:48.16:0,48,922	0/0:12,0:12:33.11:0,33,970	0/1:8,15:23:42.31:819,0,42	0/0:23,0:23:63.22:0,63,1829	1/1:3,2:5:6.02:121,6,0
chr10	61319061	.	ATCTG	A	999.14	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=8.406;DP=913;FS=3.738;HRun=0;HaplotypeScore=150.8085;InbreedingCoeff=0.9843;MQ=61.73;MQ0=8;MQRankSum=-4.544;QD=32.23;ReadPosRankSum=-5.183;VQSLOD=2.6127;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,112,3227	0/0:6,0:6:15.05:0,15,395	0/0:66,0:42:84.84:0,85,2143	0/0:76,0:52:99:0,104,2300	0/0:23,0:23:66.20:0,66,1559	0/0:23,0:23:66.23:0,66,1703	0/0:30,0:30:78.15:0,78,1845	1/1:5,25:29:66.16:1094,66,0	0/0:28,0:28:78.27:0,78,1997	0/0:38,0:37:96.33:0,96,2515	0/0:27,0:27:78.27:0,78,2024	0/0:22,0:22:54.09:0,54,1194	0/0:29,0:29:81.25:0,81,1968	0/0:29,0:29:81.26:0,81,2013	0/0:26,0:26:72.21:0,72,1746	0/0:30,0:30:90.28:0,90,2200	0/0:29,0:30:54.60:0,55,1928	0/0:27,0:27:78.20:0,78,1909	0/0:31,0:31:87.26:0,87,2013	0/0:39,0:39:99:0,114,2849	0/0:63,0:63:99:0,172,4312	0/0:26,0:26:78.25:0,78,1944	0/0:33,0:33:96.33:0,96,2485	0/0:42,0:42:99:0,108,2766	0/0:21,0:21:63.20:0,63,1558	0/0:33,0:33:96.31:0,96,2424	0/0:24,0:24:69.24:0,69,1778	0/0:11,0:11:33.11:0,33,850
chr10	61319201	.	C	CTG	313.96	PASS	AB=0.909;AC=3;AF=0.054;AN=56;BaseQRankSum=0.502;DP=776;FS=5.057;HRun=0;HaplotypeScore=110.5045;InbreedingCoeff=0.6383;MQ=71.10;MQ0=8;MQRankSum=0.242;QD=8.72;ReadPosRankSum=-5.684;VQSLOD=1.9357;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,114,1507	0/0:10,0:10:30.10:0,30,412	0/0:36,0:30:40.60:0,41,585	0/0:61,0:45:39.11:0,39,562	0/0:29,0:29:87.27:0,87,1176	0/0:26,1:27:78.70:0,79,1036	0/0:26,0:26:66.67:0,67,890	1/1:12,4:13:24.01:357,24,0	0/0:35,0:35:84.25:0,84,1119	0/0:28,0:28:72.23:0,72,976	0/0:17,0:17:48.16:0,48,658	0/0:21,0:21:63.21:0,63,864	0/0:25,0:24:63.21:0,63,864	0/0:29,0:29:81.24:0,81,1078	0/0:24,0:24:66.17:0,66,889	0/0:26,0:26:75.24:0,75,1012	0/0:25,0:25:75.22:0,75,997	0/1:18,2:20:61.93:62,0,581	0/0:22,0:19:51.15:0,51,669	0/0:28,0:28:78.25:0,78,1053	0/0:39,0:39:99:0,105,1422	0/0:31,0:31:80.92:0,81,1062	0/0:21,0:21:51.13:0,51,665	0/0:42,1:43:99:0,108,1466	0/0:14,0:14:33.11:0,33,453	0/0:42,0:42:99:0,111,1501	0/0:26,0:26:72.24:0,72,987	0/0:6,0:6:15.05:0,15,205
chr10	61319489	.	TC	T	2892.37	PASS	AB=0.833;AC=11;AF=0.196;AN=56;BaseQRankSum=11.293;DP=448;FS=3.308;HRun=1;HaplotypeScore=42.0546;InbreedingCoeff=0.9109;MQ=62.72;MQ0=1;MQRankSum=-0.260;QD=31.78;ReadPosRankSum=-0.076;VQSLOD=3.1384;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,27:27:66.22:919,66,0	0/0:6,0:6:18.06:0,18,245	0/1:4,1:2:3.03:3,0,37	0/0:10,0:9:24.07:0,24,326	1/1:0,16:16:42.08:546,42,0	0/0:12,0:12:36.09:0,36,488	0/0:6,0:6:10.95:0,11,208	1/1:0,21:21:63.15:821,63,0	1/1:0,13:13:30.10:419,30,0	0/0:25,0:25:75.25:0,75,1057	0/0:13,0:13:39.10:0,39,521	0/0:13,0:13:36.09:0,36,493	0/0:14,0:14:42.12:0,42,580	0/0:20,0:20:54.17:0,54,753	0/0:16,0:16:48.15:0,48,668	0/0:10,0:10:30.09:0,30,411	0/0:18,0:18:54.15:0,54,734	1/1:1,8:9:27.08:360,27,0	0/0:14,0:14:42.12:0,42,561	0/0:34,0:34:96.32:0,96,1370	0/0:20,0:20:60.17:0,60,818	0/0:10,0:10:30.09:0,30,411	0/0:29,0:29:84.27:0,84,1181	0/0:20,0:20:60.20:0,60,857	0/0:16,0:16:48.10:0,48,612	0/0:22,0:22:66.19:0,66,894	0/0:21,0:21:63.17:0,63,860	0/0:8,0:7:21.07:0,21,299
chr10	61320309	.	A	AT	726.48	PASS	AC=6;AF=0.115;AN=52;BaseQRankSum=5.075;DP=630;FS=3.748;HRun=1;HaplotypeScore=68.4630;InbreedingCoeff=0.9734;MQ=61.22;MQ0=6;MQRankSum=-2.052;QD=19.12;ReadPosRankSum=-0.522;VQSLOD=3.6764;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,9:6:12.04:173,12,0	0/0:12,0:12:36.12:0,36,467	0/0:34,0:26:11.44:0,11,651	0/0:44,0:33:62.25:0,62,934	1/1:0,14:9:27.02:376,27,0	0/0:36,0:36:96.13:0,96,1153	0/0:17,0:17:48.09:0,48,599	./.	1/1:2,13:11:21.07:313,21,0	0/0:30,0:30:90.20:0,90,1108	0/0:21,0:20:57.08:0,57,704	0/0:19,0:19:57.18:0,57,736	0/0:22,0:22:56.61:0,57,687	0/0:19,0:19:30.32:0,30,615	0/0:21,0:21:57.03:0,57,661	0/0:22,0:22:63.09:0,63,775	0/0:34,0:34:90.25:0,90,1149	./.	0/0:33,0:31:87.27:0,87,1116	0/0:39,0:39:96.21:0,96,1209	0/0:33,0:32:87.20:0,87,1063	0/0:11,0:11:23.96:0,24,277	0/0:12,0:12:33.11:0,33,427	0/0:15,0:15:42.09:0,42,525	0/0:19,0:19:51.02:0,51,590	0/0:49,0:49:99:0,141,1737	0/0:25,0:25:66.19:0,66,826	0/0:19,0:19:45.04:0,45,529
chr10	61321248	.	CT	C	510.74	PASS	AB=0.795;AC=8;AF=0.174;AN=46;BaseQRankSum=4.532;DP=579;FS=11.756;HRun=7;HaplotypeScore=38.8373;InbreedingCoeff=0.4307;MQ=25.93;MQ0=120;MQRankSum=-2.166;QD=5.11;ReadPosRankSum=1.066;VQSLOD=-0.3559;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:9,12:9:18.58:107,0,19	./.	./.	./.	1/1:14,11:2:3.01:31,3,0	0/0:31,1:25:33.05:0,33,394	0/1:20,1:7:12.53:13,0,170	./.	1/1:0,21:18:42.09:428,42,0	0/0:27,0:10:21.07:0,21,264	0/0:22,0:11:6.01:0,6,75	0/0:14,0:12:21.07:0,21,264	0/0:15,1:8:18.02:0,18,208	0/0:30,0:24:45.14:0,45,560	0/0:22,1:19:42.13:0,42,528	0/0:22,2:21:2.52:0,3,346	0/0:24,1:16:5.98:0,6,58	1/1:6,6:5:6.01:61,6,0	0/0:23,0:13:39.12:0,39,491	0/0:31,0:15:20.93:0,21,246	0/0:20,1:3:2.97:0,3,20	0/0:20,0:7:6.02:0,6,75	0/0:16,0:7:6.02:0,6,75	0/0:20,0:8:12.04:0,12,151	0/0:21,0:13:9.03:0,9,112	0/0:33,0:22:66.14:0,66,796	0/0:27,0:16:36.12:0,36,452	./.
chr10	61322412	.	T	TA	1051.58	PASS	AB=1.000;AC=12;AF=0.214;AN=56;BaseQRankSum=13.488;DP=578;FS=0.000;HRun=11;HaplotypeScore=76.4679;InbreedingCoeff=0.7547;MQ=69.93;MQ0=0;MQRankSum=-3.019;QD=7.11;ReadPosRankSum=-3.104;VQSLOD=1.5401;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:20:42.05:195,42,0	0/0:13,0:13:26.86:0,27,209	0/1:13,0:14:27.80:28,0,98	0/1:6,0:6:7.04:7,0,38	1/1:32,0:33:81.27:382,81,0	0/0:24,0:25:58.78:0,59,445	0/0:15,0:15:41.84:0,42,325	1/1:34,0:34:58.74:241,59,0	1/1:27,0:27:58.88:274,59,0	0/0:28,0:28:68.71:0,69,534	0/0:31,0:31:71.66:0,72,555	0/0:11,0:11:0.82:0,1,139	0/0:11,0:11:17.89:0,18,139	0/0:13,0:13:35.86:0,36,279	0/0:14,0:14:32.85:0,33,253	0/0:14,0:14:16.82:0,17,196	0/0:18,0:18:33.71:0,34,257	1/1:13,0:13:22.38:103,22,0	0/0:29,1:30:38.24:0,38,476	0/0:39,2:41:43.64:0,44,696	0/0:14,0:14:41.84:0,42,325	0/0:21,0:21:44.82:0,45,348	0/0:21,2:23:20.30:0,20,338	0/0:12,0:12:30.83:0,31,234	0/0:22,0:21:62.76:0,63,488	0/0:23,0:23:28.35:0,28,369	0/0:23,1:23:17.28:0,17,318	0/0:27,0:27:74.71:0,75,580
chr10	61322413	.	A	AAAAC	6084.69	PASS	AB=0.933;AC=11;AF=0.196;AN=56;BaseQRankSum=-5.388;DP=575;FS=1.742;HRun=0;HaplotypeScore=94.8750;InbreedingCoeff=0.8792;MQ=69.15;MQ0=0;MQRankSum=-2.178;QD=41.11;ReadPosRankSum=-2.445;VQSLOD=4.5319;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,20:23:48.16:1141,48,0	0/0:13,0:13:36.03:0,36,577	0/0:15,0:14:22.08:0,22,389	0/0:5,0:5:12:0,12,160	1/1:2,33:35:99:2194,105,0	0/0:24,0:24:66.17:0,66,1157	0/0:15,0:15:45.15:0,45,823	1/1:33,0:33:85.37:583,85,0	1/1:5,23:29:66.22:1534,66,0	0/0:27,0:27:78.25:0,78,1392	0/0:30,0:30:84.25:0,84,1462	0/0:11,0:11:28.63:0,29,456	0/0:11,0:11:30.06:0,30,439	0/0:12,0:12:36.12:0,36,682	0/0:14,0:14:39.11:0,39,663	0/1:13,1:14:40.81:41,0,505	0/0:18,0:18:46.30:0,46,719	1/1:1,13:14:24.07:591,24,0	0/0:28,0:28:81.19:0,81,1363	0/0:41,0:41:99:0,120,2015	0/0:14,0:14:42.14:0,42,790	0/0:19,0:19:48.16:0,48,880	0/0:23,0:23:66.13:0,66,1049	0/0:12,0:12:33.99:0,34,598	0/0:22,0:21:66.22:0,66,1222	0/0:23,0:23:64.07:0,64,1077	0/0:24,0:23:60.13:0,60,979	0/0:26,0:26:75.26:0,75,1421
chr10	61322415	.	A	AAC	3108.08	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=5.542;DP=578;FS=2.822;HRun=0;HaplotypeScore=81.2326;InbreedingCoeff=0.9633;MQ=69.88;MQ0=0;MQRankSum=-0.537;QD=23.19;ReadPosRankSum=-0.506;VQSLOD=3.6640;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:22:44.06:391,44,0	0/0:13,0:13:39.06:0,39,510	0/0:15,0:14:31.95:0,32,358	0/0:6,0:6:14.88:0,15,152	1/1:35,0:35:99:811,99,0	0/0:23,0:23:69.16:0,69,969	0/0:16,0:16:48.14:0,48,693	1/1:2,32:34:96.16:1359,96,0	1/1:28,0:29:61.77:528,62,0	0/0:26,0:26:78.25:0,78,1138	0/0:30,0:30:90.20:0,90,1247	0/0:11,0:11:31.63:0,32,406	0/0:11,0:11:30.06:0,30,380	0/0:12,0:12:36.12:0,36,550	0/0:13,0:13:39.11:0,39,554	0/0:14,0:14:15.80:0,16,491	0/0:19,0:19:57.01:0,57,691	1/1:14,0:14:5.08:188,5,0	0/0:30,0:30:89.88:0,90,1193	0/0:41,0:41:99:0,120,1661	0/0:17,0:17:45.14:0,45,664	0/0:17,0:17:51.15:0,51,740	0/0:24,0:24:68.82:0,69,892	0/0:12,0:12:36.10:0,36,511	0/0:22,0:21:66.22:0,66,991	0/0:23,0:23:64.07:0,64,889	0/0:23,0:22:65.64:0,66,845	0/0:26,0:26:75.25:0,75,1146
chr10	61322780	.	AT	A	4577.73	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=12.236;DP=597;FS=8.174;HRun=2;HaplotypeScore=58.5234;InbreedingCoeff=0.9946;MQ=70.94;MQ0=0;MQRankSum=-0.674;QD=36.33;ReadPosRankSum=-1.312;VQSLOD=4.4729;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,32:32:90.29:1168,90,0	0/0:15,0:15:45.15:0,45,674	0/0:12,0:12:24.24:0,24,392	0/0:6,0:6:15.05:0,15,213	1/1:1,29:30:78.25:1012,78,0	0/0:29,0:29:81.27:0,81,1214	0/0:19,0:19:51.16:0,51,744	1/1:0,34:34:99:1268,102,0	1/1:0,23:23:66.21:857,66,0	0/0:34,0:34:99:0,99,1458	0/0:36,0:36:99:0,108,1583	0/0:13,0:13:39.11:0,39,549	0/0:18,0:18:54.18:0,54,808	0/0:12,0:12:36.12:0,36,539	0/0:22,0:22:66.21:0,66,969	0/0:14,0:14:42.14:0,42,630	0/0:24,0:24:72.24:0,72,1077	1/1:0,7:7:21.07:273,21,0	0/0:19,0:19:54.16:0,54,757	0/0:35,0:35:99:0,105,1553	0/0:18,0:18:54.18:0,54,807	0/0:18,0:18:54.18:0,54,809	0/0:25,0:25:56.82:0,57,1001	0/0:9,0:9:27.09:0,27,405	0/0:17,0:17:51.17:0,51,747	0/0:33,0:33:96.33:0,96,1439	0/0:29,0:29:84.27:0,84,1222	0/0:14,0:14:39.13:0,39,584
chr10	61323107	.	C	CTT	8649.85	PASS	AB=0.520;AC=31;AF=0.554;AN=56;BaseQRankSum=-12.344;DP=465;FS=11.900;HRun=9;HaplotypeScore=66.0059;InbreedingCoeff=0.9387;MQ=73.37;MQ0=0;MQRankSum=0.338;QD=34.74;ReadPosRankSum=0.751;VQSLOD=3.9721;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:75.15:0,75,787	1/1:1,7:8:18.05:277,18,0	0/0:23,0:15:21.37:0,21,238	0/0:11,0:9:6.88:0,7,66	0/0:28,0:28:78.16:0,78,821	0/0:13,0:13:30.05:0,30,319	0/0:11,0:11:27.06:0,27,287	0/0:31,0:31:78.16:0,78,824	0/0:13,0:13:36.09:0,36,383	1/1:2,17:22:60.12:819,60,0	1/1:3,14:19:48.06:667,48,0	1/1:2,9:11:21.07:323,21,0	1/1:0,12:12:33.11:508,33,0	1/1:3,9:12:36.08:528,36,0	1/1:1,11:13:36.11:535,36,0	0/1:1,11:13:2.35:348,0,2	1/1:5,14:19:36.12:554,36,0	0/0:13,0:13:33.07:0,33,351	1/1:7,15:24:50.64:707,51,0	1/1:5,15:21:45.15:693,45,0	1/1:3,11:14:36.08:528,36,0	0/0:20,0:20:54.10:0,54,567	0/0:14,0:14:36.08:0,36,383	0/0:11,0:11:27.06:0,27,287	1/1:2,13:15:30.10:462,30,0	1/1:2,19:22:57.18:857,57,0	1/1:0,15:15:32.97:508,33,0	1/1:1,7:9:25.12:336,25,0
chr10	61323420	.	T	TG	3038.72	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=10.346;DP=550;FS=0.000;HRun=6;HaplotypeScore=57.3308;InbreedingCoeff=0.9857;MQ=57.42;MQ0=6;MQRankSum=1.251;QD=31.33;ReadPosRankSum=1.997;VQSLOD=4.1333;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,32:33:87.28:1086,87,0	0/0:4,0:4:12.03:0,12,122	0/0:42,0:16:42.05:0,42,410	0/0:39,0:14:36.06:0,36,360	1/1:2,25:27:69.22:868,69,0	0/0:24,0:24:66.15:0,66,673	0/0:19,0:19:54.07:0,54,534	0/0:22,0:19:51.11:0,51,519	1/1:0,19:19:54.17:679,54,0	0/0:20,0:20:51.11:0,51,520	0/0:12,0:12:36.08:0,36,367	0/0:16,0:16:42.07:0,42,415	0/0:9,0:9:21.03:0,21,206	0/0:16,0:16:42.08:0,42,421	0/0:16,0:16:39.09:0,39,397	0/0:14,0:14:42.10:0,42,428	0/0:34,0:34:90.16:0,90,906	1/1:1,17:18:45.14:566,45,0	0/0:17,0:15:33.07:0,33,337	0/0:13,0:13:39.09:0,39,398	0/0:24,0:24:57.12:0,57,581	0/0:18,0:18:51.10:0,51,514	0/0:15,0:14:39.09:0,39,398	0/0:17,0:17:45.10:0,45,459	0/0:13,0:13:39.09:0,39,397	0/0:21,0:21:54.12:0,54,551	0/0:22,0:21:60.12:0,60,604	0/0:6,0:5:15.03:0,15,153
chr10	61323634	.	T	TC	2133.97	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=12.209;DP=601;FS=0.000;HRun=5;HaplotypeScore=76.4347;InbreedingCoeff=0.9971;MQ=88.02;MQ0=0;MQRankSum=-8.068;QD=27.36;ReadPosRankSum=-1.140;VQSLOD=3.1133;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,19:26:54:650,54,0	0/0:10,0:10:30.08:0,30,322	0/0:36,0:35:85.92:0,86,883	0/0:33,0:34:74.53:0,75,776	1/1:3,18:21:54.06:645,54,0	0/0:33,0:33:96.23:0,96,1023	0/0:16,0:16:48.10:0,48,501	0/0:34,0:34:81.20:0,81,871	1/1:3,20:23:60.13:762,60,0	0/0:23,0:23:66.14:0,66,696	0/0:24,0:24:66.14:0,66,693	0/0:9,0:9:27.05:0,27,282	0/0:13,0:13:39.10:0,39,417	0/0:23,0:23:66.17:0,66,709	0/0:22,0:22:60.15:0,60,645	0/0:15,0:15:39.10:0,39,419	0/0:15,0:15:39.10:0,39,419	1/1:1,7:8:18.06:237,18,0	0/0:20,0:19:51.12:0,51,548	0/0:27,0:27:81.12:0,81,834	0/0:20,0:19:48.12:0,48,515	0/0:26,0:26:72.18:0,72,773	0/0:29,0:29:84.19:0,84,894	0/0:12,0:12:33.08:0,33,355	0/0:15,0:15:45.09:0,45,468	0/0:28,0:28:78.15:0,78,826	0/0:27,0:27:75.17:0,75,796	0/0:12,0:12:33.08:0,33,355
chr10	61323668	.	GT	G	2962.62	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=13.671;DP=618;FS=0.448;HRun=3;HaplotypeScore=76.7518;InbreedingCoeff=0.9949;MQ=79.53;MQ0=0;MQRankSum=-10.397;QD=34.85;ReadPosRankSum=-0.153;VQSLOD=3.9333;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,28:28:75.25:1040,75,0	0/0:14,0:14:42.14:0,42,672	0/0:27,0:27:74.04:0,74,1088	0/0:26,0:26:72.15:0,72,1119	1/1:0,26:26:69.23:962,69,0	0/0:40,0:40:99:0,120,1908	0/0:18,0:17:54.17:0,54,835	0/0:25,0:25:72.25:0,72,1151	1/1:2,23:25:66.22:916,66,0	0/0:21,0:21:63.21:0,63,1007	0/0:29,0:29:87.30:0,87,1378	0/0:15,0:15:45.15:0,45,720	0/0:12,0:12:36.11:0,36,552	0/0:25,0:25:75.23:0,75,1174	0/0:20,0:20:60.20:0,60,950	0/0:15,0:15:45.15:0,45,720	0/0:9,0:9:24.08:0,24,383	1/1:0,6:6:15.05:204,15,0	0/0:29,0:28:84.27:0,84,1286	0/0:30,0:30:90.31:0,90,1433	0/0:17,0:17:51.17:0,51,815	0/0:31,0:31:93.32:0,93,1464	0/0:30,0:30:90.25:0,90,1384	0/0:12,0:12:36.12:0,36,576	0/0:13,0:13:39.13:0,39,621	0/0:31,0:31:93.32:0,93,1481	0/0:31,0:31:93.32:0,93,1470	0/0:13,0:13:39.13:0,39,623
chr10	61325257	.	A	ACTT	4886	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=3.910;DP=696;FS=2.688;HRun=0;HaplotypeScore=107.6684;InbreedingCoeff=0.9996;MQ=61.29;MQ0=1;MQRankSum=-0.549;QD=52.54;ReadPosRankSum=2.760;VQSLOD=7.3627;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,34:41:99:2145,99,0	0/0:12,0:12:36.12:0,36,599	0/0:28,0:26:66.23:0,66,1088	0/0:34,0:32:43.16:0,43,1212	1/1:1,13:14:27.09:611,27,0	0/0:14,0:14:42.14:0,42,700	0/0:34,0:34:93.32:0,93,1548	0/0:31,0:31:90.27:0,90,1404	1/1:4,18:23:63.17:1315,63,0	0/0:24,0:24:72.24:0,72,1176	0/0:28,0:27:75.24:0,75,1224	0/0:14,0:14:42.14:0,42,696	0/0:22,0:22:57.19:0,57,947	0/0:24,0:24:72.24:0,72,1169	0/0:22,0:22:63.22:0,63,1046	0/0:17,1:18:48.15:0,48,771	0/0:32,0:32:75.21:0,75,1219	1/1:1,14:15:36.12:815,36,0	0/0:18,0:18:45.14:0,45,725	0/0:26,0:26:75.26:0,75,1236	0/0:37,0:37:99:0,108,1773	0/0:29,0:29:72.23:0,72,1166	0/0:25,0:25:63.21:0,63,1037	0/0:30,0:30:87.29:0,87,1425	0/0:34,0:34:96.23:0,96,1507	0/0:22,0:22:63.19:0,63,1000	0/0:32,0:32:90.29:0,90,1469	0/0:13,0:13:36.12:0,36,600
chr10	61326528	.	ATTGGATGGTT	A	746.27	PASS	AB=0.763;AC=8;AF=0.148;AN=54;BaseQRankSum=4.598;DP=550;FS=10.864;HRun=0;HaplotypeScore=97.0587;InbreedingCoeff=0.6187;MQ=32.23;MQ0=96;MQRankSum=-2.288;QD=15.23;ReadPosRankSum=1.921;VQSLOD=0.7405;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:1,9:6:81.88:187,0,82	0/0:12,0:9:27.09:0,27,1314	0/1:3,0:1:0:0,0,0	./.	1/1:6,5:4:3.01:98,3,0	0/0:28,0:23:42.14:0,42,1804	0/0:11,0:8:15.05:0,15,603	0/0:27,0:11:24.03:0,24,823	1/1:3,13:15:12.04:391,12,0	0/0:36,0:27:81.28:0,81,3850	0/0:21,0:17:27.09:0,27,1019	0/0:15,0:14:17.70:0,18,766	0/0:16,0:12:18.06:0,18,862	0/0:23,0:21:51.18:0,51,2562	0/0:32,0:29:42.14:0,42,1861	0/0:13,0:13:33.54:0,34,1518	0/0:21,0:18:18.06:0,18,653	1/1:6,3:6:6.02:196,6,0	0/0:20,0:3:9.03:0,9,474	0/0:30,0:26:48.16:0,48,2231	0/0:18,0:9:15.05:0,15,702	0/0:28,0:14:15.05:0,15,704	0/0:28,0:18:39.13:0,39,1777	0/0:16,0:12:9.03:0,9,355	0/0:19,0:16:45.11:0,45,1890	0/0:30,0:22:57.20:0,57,2891	0/0:34,0:32:59.66:0,60,2990	0/0:16,0:7:3.01:0,3,158
chr10	61329013	.	GA	G	1576.34	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=6.110;DP=360;FS=17.692;HRun=4;HaplotypeScore=34.9328;InbreedingCoeff=0.9652;MQ=47.73;MQ0=10;MQRankSum=0.086;QD=23.53;ReadPosRankSum=2.007;VQSLOD=1.7960;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,18:16:36.11:429,36,0	0/0:5,0:5:15.05:0,15,206	0/0:29,0:9:27.08:0,27,360	0/0:25,0:9:26.79:0,27,306	1/1:2,16:17:36.02:412,36,0	0/0:15,0:15:45.12:0,45,608	0/0:7,0:6:18.06:0,18,241	0/0:18,0:18:54.17:0,54,726	1/1:1,19:19:48.15:571,48,0	0/0:9,0:9:24.08:0,24,336	0/0:16,0:16:45.14:0,45,613	0/0:8,0:8:21.07:0,21,294	0/0:5,0:5:15.01:0,15,188	0/0:9,0:9:24.08:0,24,335	0/0:10,0:10:30.06:0,30,392	0/0:6,0:6:18.06:0,18,251	0/0:16,0:16:48.16:0,48,668	1/1:0,11:11:27.08:324,27,0	0/0:12,0:12:36.08:0,36,480	0/0:13,0:13:39.13:0,39,545	0/0:3,0:3:9.03:0,9,126	0/0:9,0:9:27.09:0,27,377	0/0:17,0:17:51.17:0,51,708	0/0:7,0:7:21.07:0,21,294	0/0:7,0:7:21.07:0,21,294	0/0:18,0:18:51.15:0,51,687	0/0:18,0:17:51.14:0,51,692	0/0:11,0:11:33.11:0,33,462
chr10	61329609	.	GA	G	3543.73	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=16.276;DP=700;FS=6.785;HRun=1;HaplotypeScore=93.9921;InbreedingCoeff=0.9973;MQ=59.62;MQ0=5;MQRankSum=1.416;QD=27.90;ReadPosRankSum=5.299;VQSLOD=3.1921;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,37:38:99:1171,105,0	0/0:7,0:7:21.07:0,21,332	0/0:29,1:19:54.15:0,54,806	0/0:22,0:16:33.79:0,34,549	1/1:4,42:45:99:1302,117,0	0/0:24,0:24:69.21:0,69,1041	0/0:18,0:18:54.18:0,54,860	0/0:35,0:35:99:0,105,1543	1/1:3,17:20:39.11:435,39,0	0/0:36,0:36:99:0,108,1682	0/0:35,0:35:90.27:0,90,1386	0/0:13,0:13:33.10:0,33,502	0/0:21,0:21:60.20:0,60,952	0/0:16,0:16:48.16:0,48,763	0/0:21,0:21:63.20:0,63,980	0/0:23,0:23:66.21:0,66,1029	0/0:28,2:30:20.33:0,20,1187	1/1:1,21:22:57.15:636,57,0	0/0:15,0:14:42.13:0,42,639	0/0:33,0:33:93.32:0,93,1484	0/0:12,0:12:36.12:0,36,563	0/0:18,0:18:48.15:0,48,743	0/0:33,0:33:93.21:0,93,1429	0/0:27,0:27:78.27:0,78,1228	0/0:31,0:31:93.28:0,93,1407	0/0:21,0:21:63.15:0,63,975	0/0:35,1:36:62.78:0,63,1330	0/0:16,0:16:48.12:0,48,692
chr10	61330352	.	G	GTTTA	1411.25	PASS	AC=8;AF=0.154;AN=52;BaseQRankSum=7.386;DP=586;FS=19.854;HRun=0;HaplotypeScore=75.4932;InbreedingCoeff=0.8722;MQ=46.65;MQ0=48;MQRankSum=-6.800;QD=23.92;ReadPosRankSum=0.671;VQSLOD=1.7669;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,5:4:2.90:16,3,0	0/0:11,0:11:26.92:0,27,512	./.	./.	1/1:6,20:27:39.13:976,39,0	0/0:22,0:21:36.12:0,36,683	0/0:12,0:11:27.05:0,27,456	0/0:37,0:20:51.12:0,51,882	1/1:1,14:13:15.05:397,15,0	0/0:28,0:28:75.23:0,75,1348	0/0:25,0:25:39.13:0,39,740	0/0:19,0:19:36.12:0,36,683	0/0:17,0:17:38.96:0,39,667	0/0:21,0:21:33:0,33,554	0/0:28,0:28:54.19:0,54,1024	0/0:15,0:14:30.09:0,30,537	0/0:38,0:34:60.14:0,60,1076	1/1:1,3:3:6.02:161,6,0	0/0:21,0:12:36.12:0,36,653	0/0:19,0:19:42.02:0,42,716	0/0:12,0:10:11.93:0,12,151	0/0:18,0:18:30.09:0,30,565	0/0:32,0:31:54.17:0,54,991	0/0:24,0:20:24.08:0,24,455	0/0:18,0:17:33.03:0,33,523	0/0:33,1:30:81.28:0,81,1521	0/0:35,0:32:72.02:0,72,1272	0/0:4,0:3:6.02:0,6,114
chr10	61330489	.	G	GA	1389.37	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=8.774;DP=706;FS=1.418;HRun=0;HaplotypeScore=68.8746;InbreedingCoeff=0.9970;MQ=56.64;MQ0=7;MQRankSum=-2.915;QD=19.30;ReadPosRankSum=-2.665;VQSLOD=4.8623;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,27:22:33.11:526,33,0	0/0:11,0:11:33.10:0,33,442	0/0:42,0:26:75.17:0,75,988	0/0:40,0:27:78.21:0,78,1054	1/1:0,20:18:21.07:332,21,0	0/0:25,0:25:57.19:0,57,795	0/0:15,0:15:42.13:0,42,570	0/0:26,0:25:75.22:0,75,1015	1/1:1,14:14:24.08:382,24,0	0/0:26,0:26:66.21:0,66,909	0/0:24,0:24:63.21:0,63,878	0/0:18,0:18:51.17:0,51,713	0/0:22,0:22:63.13:0,63,855	0/0:20,0:20:45.14:0,45,622	0/0:28,0:28:75.24:0,75,1033	0/0:19,0:19:54.18:0,54,755	0/0:33,0:33:93.31:0,93,1296	1/1:2,8:10:21.04:308,21,0	0/0:25,1:25:41.48:0,41,956	0/0:34,0:34:93.30:0,93,1284	0/0:51,0:51:99:0,147,2026	0/0:23,0:23:57.16:0,57,760	0/0:20,0:20:51.17:0,51,713	0/0:22,0:21:63.21:0,63,881	0/0:28,0:28:84.28:0,84,1174	0/0:38,1:38:99:0,102,1363	0/0:25,0:24:72.23:0,72,989	0/0:17,0:17:51.17:0,51,707
chr10	61330617	.	A	AG	1900.08	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=11.498;DP=725;FS=7.012;HRun=1;HaplotypeScore=79.6671;InbreedingCoeff=0.9930;MQ=59.38;MQ0=3;MQRankSum=-3.181;QD=20.65;ReadPosRankSum=-1.975;VQSLOD=2.8840;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,37:36:66.04:889,66,0	0/0:8,0:8:21.07:0,21,273	0/0:44,2:39:63.55:0,64,1290	0/0:39,1:32:76.10:0,76,983	1/1:1,20:19:15.05:224,15,0	0/0:17,0:17:45.10:0,45,565	0/0:26,0:26:75.24:0,75,973	0/0:31,0:29:81.24:0,81,1016	1/1:1,12:13:29.92:364,30,0	0/0:29,0:29:84.27:0,84,1088	0/0:19,0:18:36.12:0,36,467	0/0:29,0:29:78.24:0,78,999	0/0:24,0:24:72.23:0,72,935	0/0:25,0:25:69.21:0,69,879	0/0:29,0:29:87.28:0,87,1129	0/0:18,0:18:48.14:0,48,609	0/0:21,0:21:40.20:0,40,706	1/1:1,16:18:39.13:582,39,0	0/0:38,0:36:99:0,105,1327	0/0:29,0:28:62.36:0,62,753	0/0:47,0:47:99:0,141,1777	0/0:32,0:32:66.18:0,66,826	0/0:16,0:16:39.13:0,39,506	0/0:25,0:25:69.22:0,69,895	0/0:12,0:12:21.07:0,21,273	0/0:30,0:30:90.27:0,90,1140	0/0:31,0:31:90.29:0,90,1168	0/0:11,0:11:33.11:0,33,428
chr10	61330958	.	AGTCTCCTCTG	A	1166.86	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.075;DP=579;FS=6.429;HRun=0;HaplotypeScore=174.6427;InbreedingCoeff=0.9994;MQ=63.18;MQ0=3;MQRankSum=-0.263;QD=50.73;ReadPosRankSum=-3.974;VQSLOD=2.2717;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,120,6023	0/0:14,0:14:42.14:0,42,2008	0/0:26,0:16:44.33:0,44,2155	0/0:25,0:18:48.16:0,48,2019	0/0:23,0:23:50.89:0,51,2629	0/0:16,0:16:45.12:0,45,1984	0/0:26,0:26:72.25:0,72,3358	1/1:6,17:23:54.12:1262,54,0	0/0:19,0:19:48.16:0,48,2470	0/0:22,0:22:63.19:0,63,2862	0/0:12,0:12:36.12:0,36,1844	0/0:20,0:20:60.21:0,60,2751	0/0:21,0:21:63.22:0,63,2971	0/0:17,0:17:48.14:0,48,2149	0/0:19,0:19:54.19:0,54,2727	0/0:13,0:13:39.12:0,39,1793	0/0:25,0:25:69.24:0,69,3477	0/0:29,0:29:78.22:0,78,3486	0/0:24,0:23:66.23:0,66,3268	0/0:17,0:17:45.15:0,45,2331	0/0:25,0:25:72.25:0,72,3754	0/0:19,0:19:57.20:0,57,2675	0/0:15,0:15:42.14:0,42,2154	0/0:13,0:13:36.12:0,36,1878	0/0:15,0:15:39.13:0,39,1814	0/0:20,0:19:54.18:0,54,2763	0/0:24,0:23:69.22:0,69,3273	0/0:13,0:13:39.13:0,39,2034
chr10	61337697	.	CCAGA	C	1448.02	PASS	AC=8;AF=0.200;AN=40;BaseQRankSum=7.635;DP=588;FS=0.000;HRun=0;HaplotypeScore=43.4657;InbreedingCoeff=0.7368;MQ=27.29;MQ0=157;MQRankSum=1.377;QD=17.24;ReadPosRankSum=3.251;VQSLOD=3.0281;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,8:7:15.05:280,15,0	0/0:9,0:8:12.04:0,12,319	./.	./.	1/1:8,18:15:33.07:580,33,0	0/0:28,0:16:2.90:0,3,80	./.	./.	1/1:7,14:10:18.06:336,18,0	0/0:25,0:15:45.15:0,45,1191	0/0:21,0:16:8.74:0,9,239	./.	0/0:22,0:8:9.03:0,9,239	0/0:23,0:12:0:0,0,0	./.	0/0:18,0:15:12.04:0,12,278	0/0:27,0:8:3.01:0,3,80	1/1:13,11:14:21.07:392,21,0	0/0:23,0:3:3.01:0,3,80	0/0:33,0:25:33.11:0,33,877	./.	0/0:16,0:10:6.02:0,6,160	0/0:19,0:14:15.05:0,15,399	./.	0/0:15,0:11:12.04:0,12,312	0/0:36,0:17:45.15:0,45,1200	0/0:29,0:17:26.43:0,26,657	0/0:14,0:7:18.06:0,18,470
chr10	61338031	.	T	TG	46.40	PASS	AC=4;AF=0.077;AN=52;BaseQRankSum=2.460;DP=476;FS=11.633;HRun=0;HaplotypeScore=49.3664;InbreedingCoeff=0.8204;MQ=56.58;MQ0=7;MQRankSum=-2.778;QD=6.63;ReadPosRankSum=1.178;VQSLOD=2.0338;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/0:8,0:8:15.05:0,15,210	0/0:17,0:10:27.09:0,27,368	0/0:28,0:13:39.11:0,39,501	1/1:2,2:3:6.02:95,6,0	0/0:19,0:19:45.06:0,45,580	0/0:14,0:13:33.11:0,33,461	0/0:36,0:33:99:0,99,1383	1/1:0,3:1:3.01:48,3,0	0/0:23,0:21:63.21:0,63,880	0/0:18,0:17:42.10:0,42,554	0/0:12,2:13:30.10:0,30,420	0/0:9,0:9:18.06:0,18,252	0/0:16,0:16:45.11:0,45,607	0/0:17,0:16:30.10:0,30,419	0/0:20,0:19:54.14:0,54,728	0/0:17,0:17:45.15:0,45,628	./.	0/0:32,0:32:93.31:0,93,1299	0/0:19,0:18:48.12:0,48,640	0/0:23,0:23:63.21:0,63,880	0/0:17,0:17:36.09:0,36,504	0/0:15,0:14:27.09:0,27,378	0/0:20,0:20:50.80:0,51,708	0/0:31,0:31:48.16:0,48,667	0/0:23,0:23:69.23:0,69,965	0/0:23,0:22:45.11:0,45,601	0/0:8,0:8:24.08:0,24,336
chr10	61342831	.	AAAAAC	A	53.02	PASS	AB=1.000;AC=6;AF=0.120;AN=50;BaseQRankSum=-1.816;DP=211;FS=11.993;HRun=0;HaplotypeScore=40.0774;InbreedingCoeff=0.2983;MQ=59.07;MQ0=14;MQRankSum=-2.298;QD=1.51;ReadPosRankSum=-3.049;VQSLOD=-0.6639;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:1,0:1:0.47:0,0,1	0/0:6,0:6:12.02:0,12,218	0/0:35,0:6:7.74:0,8,36	0/1:24,0:7:2.69:3,0,9	1/1:1,0:1:0.89:2,1,0	0/0:5,0:5:6.02:0,6,123	0/0:8,0:7:6.02:0,6,121	1/1:1,6:6:12.01:132,12,0	./.	0/0:12,0:11:26.75:0,27,408	0/0:8,0:8:17.66:0,18,205	0/0:7,0:7:6.02:0,6,122	0/0:4,0:3:4.26:0,4,46	0/0:3,0:3:2.97:0,3,61	0/0:7,0:6:12.04:0,12,223	0/0:3,0:3:9.03:0,9,184	0/0:13,0:13:21:0,21,351	./.	0/0:15,0:8:24.08:0,24,463	0/0:3,0:3:6.02:0,6,123	0/0:4,0:4:9.03:0,9,178	0/1:3,0:3:14.94:15,0,55	0/0:3,0:3:6.02:0,6,102	./.	0/0:12,0:12:24.06:0,24,453	0/0:12,0:10:27.02:0,27,465	0/0:1,0:1:3.01:0,3,44	0/0:12,0:10:15.03:0,15,265
chr10	61342836	.	C	CAA	2838.66	PASS	AC=46;AF=0.920;AN=50;BaseQRankSum=-3.269;DP=218;FS=1.897;HRun=10;HaplotypeScore=27.9620;InbreedingCoeff=0.4710;MQ=59.73;MQ0=13;MQRankSum=0.706;QD=18.08;ReadPosRankSum=3.183;VQSLOD=0.7686;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,0:1:0.89:2,1,0	1/1:1,4:6:11.51:124,12,0	0/0:36,0:7:7.55:0,8,52	0/0:24,0:7:7.10:0,7,35	1/1:1,0:1:0.47:1,0,0	1/1:0,5:5:6.02:89,6,0	1/1:0,0:7:6.01:57,6,0	1/1:7,0:6:5.63:51,6,0	./.	1/1:4,7:10:21.04:282,21,0	1/1:2,6:8:11.69:152,12,0	1/1:1,7:9:6.02:90,6,0	1/1:5,0:4:8.98:82,9,0	1/1:1,3:4:6.46:66,6,0	1/1:1,6:6:12.04:179,12,0	1/1:0,1:3:8.51:82,9,0	1/1:2,12:14:11.43:250,11,0	./.	1/1:5,10:11:29.57:387,30,0	1/1:1,2:3:6.02:89,6,0	1/1:0,3:4:8.52:98,9,0	1/1:1,0:3:3:29,3,0	1/1:0,0:3:6.01:67,6,0	./.	1/1:0,12:13:23.57:317,24,0	1/1:1,1:10:27.29:258,27,0	1/1:2,0:2:5.85:57,6,0	1/1:2,1:12:17.63:141,18,0
chr10	61344035	.	AG	A	1166.62	PASS	AB=0.511;AC=35;AF=0.761;AN=46;BaseQRankSum=-0.585;DP=104;FS=3.647;HRun=2;HaplotypeScore=255.9986;InbreedingCoeff=0.2191;MQ=28.60;MQ0=0;MQRankSum=0.092;QD=12.54;ReadPosRankSum=2.641;VQSLOD=3.0377;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:0,2:2:0.32:0,0,3	1/1:0,1:1:2.88:15,3,0	./.	./.	0/0:0,3:3:1.38:0,1,3	1/1:0,7:6:14.25:137,14,0	0/0:1,3:3:3.79:0,4,16	./.	0/1:0,8:8:1.94:42,0,2	1/1:0,8:8:18.96:178,19,0	0/1:1,7:8:6.09:32,0,6	1/1:0,2:2:6.02:63,6,0	1/1:0,2:2:6.01:62,6,0	1/1:0,2:2:5.99:54,6,0	1/1:0,2:2:5.99:53,6,0	1/1:0,5:5:7.10:67,7,0	1/1:0,4:4:5.75:45,6,0	./.	1/1:0,5:5:9.91:111,10,0	1/1:0,13:12:13.70:160,14,0	./.	1/1:0,5:5:5.67:62,6,0	1/1:0,5:5:3.94:28,4,0	1/1:0,1:1:2.99:24,3,0	1/1:0,3:3:5.94:65,6,0	0/0:0,2:2:2.04:0,2,6	0/1:0,10:10:1.57:39,0,2	1/1:0,2:2:3.48:36,3,0
chr10	61344044	.	TG	T	859.06	PASS	AB=0.758;AC=41;AF=0.854;AN=48;BaseQRankSum=-0.762;DP=185;FS=1.421;HRun=2;HaplotypeScore=285.8302;InbreedingCoeff=0.2003;MQ=28.67;MQ0=0;MQRankSum=-1.250;QD=4.94;ReadPosRankSum=3.283;VQSLOD=0.4870;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,0:8:5.30:19,5,0	1/1:0,1:1:2.88:15,3,0	./.	./.	1/1:10,0:10:7.35:23,7,0	1/1:6,7:12:14.12:91,14,0	0/0:1,4:4:4.79:0,5,18	0/1:10,0:10:0.07:0,0,0	1/1:13,0:13:8.23:62,8,0	1/1:3,8:11:16.06:111,16,0	0/1:5,8:13:6.22:25,0,6	1/1:1,2:3:4.86:43,5,0	1/1:0,2:2:5.91:39,6,0	1/1:5,2:7:5.67:34,6,0	1/1:4,2:6:3.27:24,3,0	1/1:1,5:6:6.55:47,7,0	1/1:0,4:4:5.79:36,6,0	./.	1/1:3,5:8:10.34:75,10,0	1/1:2,13:14:12.40:105,12,0	./.	1/1:1,5:6:5.63:44,6,0	1/1:5,5:10:9.78:58,10,0	1/1:0,1:1:2.74:12,3,0	1/1:4,3:7:5.90:45,6,0	0/0:3,2:5:1.96:0,2,6	0/1:8,9:17:4.24:28,0,4	1/1:1,2:3:3.46:26,3,0
chr10	61344077	.	AT	A	681.55	PASS	AC=8;AF=0.148;AN=54;BaseQRankSum=5.470;DP=306;FS=7.846;HRun=7;HaplotypeScore=247.4791;InbreedingCoeff=0.7783;MQ=58.69;MQ0=0;MQRankSum=-5.900;QD=16.62;ReadPosRankSum=-1.034;VQSLOD=0.3286;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,6:8:16.21:141,16,0	0/0:5,0:5:0.05:0,0,136	0/0:10,0:9:27.08:0,27,325	./.	1/1:2,15:17:35.88:321,36,0	0/0:14,0:13:15.74:0,16,323	0/0:10,0:9:21.02:0,21,246	0/0:18,0:18:42.09:0,42,510	1/1:2,12:14:32.67:318,33,0	0/0:19,0:19:51.33:0,51,609	0/0:16,0:16:20.19:0,20,361	0/0:6,0:6:4.34:0,4,138	0/0:7,0:7:20.61:0,21,219	0/0:8,0:8:23.29:0,23,271	0/0:11,0:10:29.04:0,29,317	0/0:5,0:5:5.30:0,5,107	0/0:9,0:9:24.03:0,24,284	1/1:0,2:2:5.97:50,6,0	0/0:14,0:14:42.07:0,42,507	0/0:24,0:24:41.90:0,42,629	0/0:5,0:5:15.05:0,15,188	0/0:12,0:12:20.75:0,21,293	0/0:21,0:21:52.81:0,53,631	0/0:4,0:4:8.04:0,8,68	0/0:10,0:10:22.27:0,22,332	0/0:8,0:7:23.10:0,23,270	0/0:26,0:26:39.56:0,40,533	0/0:3,0:3:5.24:0,5,74
chr10	61346201	.	G	GA	5674.06	PASS	AC=46;AF=0.958;AN=48;BaseQRankSum=-1.708;DP=320;FS=4.041;HRun=4;HaplotypeScore=50.6084;InbreedingCoeff=0.4038;MQ=39.55;MQ0=14;MQRankSum=-1.732;QD=19.10;ReadPosRankSum=0.268;VQSLOD=4.0656;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,19:15:36.12:492,36,0	1/1:2,1:1:2.98:22,3,0	0/0:3,0:1:3.01:0,3,34	./.	1/1:2,17:7:21.06:264,21,0	1/1:0,16:6:18.06:246,18,0	./.	./.	1/1:3,13:13:33.11:441,33,0	1/1:3,11:6:15.05:205,15,0	1/1:0,13:10:27.09:363,27,0	1/1:3,7:7:17.55:214,18,0	1/1:2,12:10:24.08:328,24,0	1/1:0,17:9:27.09:369,27,0	1/1:2,18:13:33.11:451,33,0	1/1:0,7:6:15.05:205,15,0	1/1:0,14:12:33.11:445,33,0	1/1:3,4:7:15.05:194,15,0	1/1:6,8:9:12.04:164,12,0	1/1:3,12:5:15.05:205,15,0	./.	1/1:2,11:5:9.03:123,9,0	1/1:1,13:9:21.07:287,21,0	1/1:4,4:7:12.04:164,12,0	1/1:0,8:2:3.01:41,3,0	1/1:1,9:5:12.04:164,12,0	1/1:3,17:9:15.05:205,15,0	1/1:0,2:2:6.02:82,6,0
chr10	61346560	.	T	TGTAA	4516.49	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-3.665;DP=456;FS=2.322;HRun=0;HaplotypeScore=69.8672;InbreedingCoeff=0.9456;MQ=66.63;MQ0=0;MQRankSum=-1.370;QD=63.61;ReadPosRankSum=-0.874;VQSLOD=6.4276;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,13:19:48.09:1123,48,0	0/0:7,0:7:21.07:0,21,407	0/0:7,0:7:18.06:0,18,315	0/0:3,0:3:3.01:0,3,58	1/1:6,20:25:72.16:1664,72,0	0/0:14,0:14:36.12:0,36,698	0/0:12,0:12:33.06:0,33,514	0/0:23,0:23:66.21:0,66,1195	1/1:3,8:11:33.07:737,33,0	0/0:30,0:30:90.30:0,90,1698	0/0:31,0:28:84.27:0,84,1550	0/0:8,0:8:21.05:0,21,365	0/0:11,0:11:33.11:0,33,639	0/0:8,0:8:24.08:0,24,465	0/0:11,0:11:33.11:0,33,630	0/0:8,0:8:24.07:0,24,432	0/0:8,0:8:21.07:0,21,395	1/1:5,10:15:39.13:992,39,0	0/0:20,0:20:51.31:0,51,1054	0/0:37,0:32:93.32:0,93,1776	0/0:8,0:8:24.08:0,24,453	0/0:17,0:16:45.15:0,45,864	0/0:25,0:24:72.22:0,72,1327	0/0:9,0:9:27.08:0,27,477	0/0:21,0:19:57.18:0,57,1065	0/0:25,0:24:72.24:0,72,1359	0/0:21,0:21:63.18:0,63,1152	0/0:21,0:21:57.20:0,57,1104
chr10	61346624	.	TA	T	1270.63	PASS	AB=0.889;AC=9;AF=0.161;AN=56;BaseQRankSum=10.602;DP=415;FS=6.319;HRun=9;HaplotypeScore=50.5139;InbreedingCoeff=0.8415;MQ=72.47;MQ0=0;MQRankSum=-0.766;QD=17.17;ReadPosRankSum=1.270;VQSLOD=3.5175;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,13:14:33.01:302,33,0	0/0:7,0:7:21.06:0,21,242	0/0:5,1:6:6.02:0,6,69	0/0:12,0:12:24.04:0,24,250	1/1:3,20:23:50.51:465,51,0	0/0:13,0:13:36.11:0,36,415	0/0:12,0:12:30.08:0,30,337	0/0:31,0:31:84.23:0,84,953	1/1:3,15:18:45.02:412,45,0	0/0:23,0:23:57.17:0,57,656	0/0:29,0:29:75.21:0,75,857	0/0:7,0:7:21.06:0,21,242	0/0:11,0:11:27.04:0,27,295	0/0:5,0:5:9.03:0,9,104	0/0:10,0:10:27.04:0,27,289	0/1:7,1:8:6.41:6,0,187	0/0:8,0:8:24.03:0,24,262	1/1:3,8:11:27.01:247,27,0	0/0:21,0:21:63.17:0,63,715	0/0:37,0:34:93.28:0,93,1073	0/0:8,0:8:12.04:0,12,139	0/0:10,0:10:27.08:0,27,312	0/0:16,0:16:42.12:0,42,485	0/0:9,0:9:27.08:0,27,312	0/0:13,0:13:36.09:0,36,404	0/0:20,0:20:51.15:0,51,589	0/0:22,1:22:35.72:0,36,659	0/0:10,0:10:30.09:0,30,346
chr10	61346967	.	G	GCCATA	5000.02	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=6.561;DP=619;FS=1.079;HRun=0;HaplotypeScore=120.6455;InbreedingCoeff=0.9881;MQ=84.45;MQ0=0;MQRankSum=-11.450;QD=52.08;ReadPosRankSum=0.064;VQSLOD=5.0907;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,9:19:27.09:772,27,0	0/0:9,0:9:24.08:0,24,480	0/0:21,0:21:45.14:0,45,768	0/0:20,0:19:38.83:0,39,568	1/1:7,31:39:72.25:2119,72,0	0/0:27,0:27:75.26:0,75,1487	0/0:15,0:15:42.14:0,42,826	0/0:33,0:33:87.28:0,87,1659	1/1:8,24:33:63.22:1834,63,0	0/0:29,0:29:75.24:0,75,1434	0/0:29,0:29:78.27:0,78,1559	0/0:11,0:11:27.09:0,27,523	0/0:14,0:14:42.14:0,42,838	0/0:12,0:12:33.11:0,33,659	0/0:22,0:22:54.17:0,54,1044	0/0:21,0:21:57.16:0,57,1069	0/0:16,0:16:39.10:0,39,741	1/1:2,3:5:11.07:275,11,0	0/0:19,0:19:54.19:0,54,1064	0/0:33,0:33:81.28:0,81,1608	0/0:16,0:16:48.15:0,48,924	0/0:27,0:27:75.24:0,75,1464	0/0:23,0:23:63.16:0,63,1137	0/0:18,0:18:51.17:0,51,1002	0/0:24,0:24:51.15:0,51,948	0/0:31,0:31:87.30:0,87,1738	0/0:38,0:37:96.31:0,96,1883	0/0:15,0:15:42.14:0,42,829
chr10	61347622	.	A	AT	2092.10	PASS	AB=0.923;AC=9;AF=0.161;AN=56;BaseQRankSum=2.658;DP=463;FS=2.336;HRun=6;HaplotypeScore=49.3439;InbreedingCoeff=0.8721;MQ=78.62;MQ0=0;MQRankSum=0.332;QD=23.51;ReadPosRankSum=1.752;VQSLOD=2.8546;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,18:22:45.14:566,45,0	0/0:7,0:7:18.04:0,18,184	0/0:18,0:18:25.08:0,25,399	0/0:15,0:15:25.20:0,25,243	1/1:4,23:27:66.17:812,66,0	0/0:15,0:15:45.09:0,45,453	0/0:8,0:8:21.04:0,21,214	0/0:20,0:20:39.06:0,39,389	1/1:2,14:16:39.12:491,39,0	0/0:24,0:24:63.13:0,63,642	0/0:22,0:22:66.15:0,66,673	0/0:10,0:10:24.05:0,24,245	0/0:14,0:14:39.06:0,39,384	0/0:11,0:11:33.07:0,33,332	0/0:13,0:13:36.08:0,36,367	0/1:11,1:12:9.67:10,0,211	0/0:13,0:12:39.09:0,39,398	1/1:1,11:12:30.10:377,30,0	0/0:21,0:21:42.08:0,42,425	0/0:26,0:26:78.13:0,78,774	0/0:9,0:9:21.04:0,21,208	0/0:10,0:10:30.07:0,30,306	0/0:16,0:16:45.08:0,45,452	0/0:6,0:6:18.04:0,18,184	0/0:26,0:26:75.12:0,75,735	0/0:27,1:28:40.40:0,40,712	0/0:18,0:18:51.10:0,51,513	0/0:24,0:24:60.10:0,60,603
chr10	61348006	.	TTTTCTTTC	T	1072.18	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=5.190;DP=249;FS=10.894;HRun=0;HaplotypeScore=66.7628;InbreedingCoeff=0.6824;MQ=66.08;MQ0=2;MQRankSum=-3.700;QD=28.22;ReadPosRankSum=0.299;VQSLOD=1.5530;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,6:7:6.02:107,6,0	0/0:2,0:2:5.99:0,6,91	0/0:11,0:9:4.05:0,4,330	0/0:4,0:2:3.01:0,3,75	1/1:5,6:11:15.01:317,15,0	0/0:11,0:11:24.08:0,24,700	0/0:4,0:4:9.02:0,9,198	0/0:35,0:35:50.97:0,51,228	1/1:4,5:9:12.04:302,12,0	0/0:13,0:13:36.12:0,36,1245	0/0:9,0:9:21.07:0,21,704	0/0:3,0:3:6.02:0,6,138	0/0:3,0:3:6.02:0,6,181	0/0:12,0:12:33.10:0,33,1075	0/0:4,0:4:12.03:0,12,380	0/0:4,0:4:6.02:0,6,199	0/0:14,0:14:36.12:0,36,1319	1/1:1,10:11:21.03:491,21,0	0/0:13,0:13:36.10:0,36,1190	0/0:6,0:6:12.04:0,12,408	0/0:11,0:11:30.10:0,30,1114	0/0:3,0:3:9.03:0,9,291	0/0:2,0:2:6.02:0,6,191	0/0:2,0:2:3.01:0,3,70	0/0:10,0:10:27.07:0,27,794	0/0:11,0:11:30.10:0,30,1028	0/0:10,0:10:24.08:0,24,715	0/0:14,0:14:23.99:0,24,380
chr10	61348442	.	AC	A	117.55	PASS	AC=6;AF=0.125;AN=48;BaseQRankSum=4.276;DP=408;FS=4.629;HRun=1;HaplotypeScore=31.3524;InbreedingCoeff=0.7355;MQ=26.06;MQ0=123;MQRankSum=-2.321;QD=5.88;ReadPosRankSum=1.552;VQSLOD=0.8323;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,7:5:3.01:33,3,0	0/0:8,0:6:15.03:0,15,208	./.	./.	./.	0/0:16,0:11:14.98:0,15,207	0/0:19,0:6:18.06:0,18,283	./.	1/1:1,3:2:6.02:67,6,0	0/0:21,0:15:44.88:0,45,621	0/0:14,0:9:12.04:0,12,188	0/0:13,0:9:17.98:0,18,253	0/0:12,0:9:6.02:0,6,94	0/0:21,0:10:18.06:0,18,264	0/0:13,0:10:11.76:0,12,160	0/0:12,0:9:11.87:0,12,159	0/0:34,0:18:12.04:0,12,190	1/1:2,7:8:12.03:133,12,0	0/0:12,0:5:11.85:0,12,129	0/0:24,0:15:39.05:0,39,580	0/0:24,0:4:9.01:0,9,119	0/0:17,0:11:21.07:0,21,329	0/0:16,0:13:24.08:0,24,375	0/0:13,0:10:18.06:0,18,284	0/0:7,0:6:14.97:0,15,204	0/0:26,0:16:48.10:0,48,728	0/0:26,0:21:21.07:0,21,331	0/0:6,0:4:12.04:0,12,190
chr10	61348697	.	C	CT	621.09	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=7.001;DP=707;FS=7.877;HRun=2;HaplotypeScore=58.9440;InbreedingCoeff=0.8602;MQ=49.19;MQ0=72;MQRankSum=-7.006;QD=14.12;ReadPosRankSum=0.272;VQSLOD=2.3186;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,9:8:12.04:170,12,0	0/0:10,0:10:27.08:0,27,333	0/0:55,0:3:9.01:0,9,81	0/0:65,0:5:0.99:0,1,26	1/1:2,19:20:18.06:255,18,0	0/0:27,0:26:54.17:0,54,667	0/0:22,0:21:48.01:0,48,553	0/0:28,0:14:30.07:0,30,345	1/1:0,13:8:21.07:299,21,0	0/0:26,0:25:75.22:0,75,906	0/0:23,0:22:60.08:0,60,729	0/0:19,0:19:48.06:0,48,583	0/0:24,0:24:66.12:0,66,782	0/0:20,0:20:57.17:0,57,693	0/0:19,0:19:48.10:0,48,566	0/0:21,0:20:57.16:0,57,682	0/0:28,0:28:75.23:0,75,921	1/1:0,1:1:3.01:42,3,0	0/0:33,0:21:60.15:0,60,717	0/0:26,0:24:63.19:0,63,766	0/0:29,0:29:72.19:0,72,873	0/0:30,0:29:75.17:0,75,891	0/0:30,0:30:84.26:0,84,1035	0/0:23,0:23:54.13:0,54,648	0/0:22,0:22:66.18:0,66,800	0/0:27,0:27:78.21:0,78,929	0/0:38,0:38:99:0,99,1198	0/0:18,0:17:33.08:0,33,383
chr10	61350335	.	T	TTTA	2943.34	PASS	AB=0.929;AC=9;AF=0.161;AN=56;BaseQRankSum=-2.272;DP=519;FS=2.506;HRun=0;HaplotypeScore=73.8011;InbreedingCoeff=0.8315;MQ=72.36;MQ0=0;MQRankSum=-2.494;QD=31.65;ReadPosRankSum=0.577;VQSLOD=3.9669;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,18:21:33.11:656,33,0	0/0:5,0:5:15.04:0,15,191	0/0:10,0:10:17.72:0,18,191	0/0:11,0:10:14.03:0,14,228	1/1:4,29:33:75.26:1527,75,0	0/0:28,0:27:62.25:0,62,969	0/0:15,0:15:42.12:0,42,597	0/0:35,0:35:90.29:0,90,1312	1/1:3,11:15:27.09:522,27,0	0/0:29,0:29:72.21:0,72,1031	0/0:22,0:22:60.19:0,60,873	0/0:15,0:15:42.13:0,42,599	0/0:23,0:23:63.20:0,63,936	0/0:21,0:21:60.18:0,60,870	0/0:23,0:23:63.20:0,63,918	0/1:12,1:13:23.78:24,0,487	0/0:25,0:25:69.17:0,69,962	1/1:2,9:11:18.06:379,18,0	0/0:19,0:19:54.12:0,54,738	0/0:26,0:26:66.15:0,66,931	0/0:10,0:10:27.08:0,27,390	0/0:11,0:11:33.10:0,33,464	0/0:17,0:17:48.16:0,48,728	0/0:17,0:17:51.11:0,51,709	0/0:12,0:12:27.09:0,27,410	0/0:20,0:20:48.15:0,48,691	0/0:30,0:30:87.27:0,87,1260	0/0:2,0:2:6.02:0,6,91
chr10	61350845	.	GAA	G	994.40	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=3.976;DP=376;FS=0.686;HRun=9;HaplotypeScore=156.3861;InbreedingCoeff=0.8538;MQ=65.69;MQ0=2;MQRankSum=-4.997;QD=21.62;ReadPosRankSum=0.200;VQSLOD=1.2983;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,16:17:36.08:415,36,0	0/0:8,0:8:24.08:0,24,382	0/0:14,0:11:21.06:0,21,294	0/0:7,0:6:5.99:0,6,70	1/1:0,18:18:36.10:417,36,0	0/0:13,0:12:30.10:0,30,492	0/0:10,0:10:30.10:0,30,492	0/0:6,0:20:40.94:0,41,177	1/1:0,8:8:21.06:245,21,0	0/0:33,0:34:84.28:0,84,1347	0/0:23,0:23:66.15:0,66,1014	0/0:12,0:12:30.10:0,30,492	0/0:9,0:9:24.05:0,24,365	0/0:8,0:9:23.48:0,23,295	0/0:11,0:11:30.07:0,30,463	0/0:10,0:10:27.09:0,27,443	0/0:10,0:10:24.08:0,24,394	1/1:1,2:3:6.01:70,6,0	0/0:18,0:18:45.15:0,45,737	0/0:31,0:31:87.25:0,87,1396	0/0:4,0:4:6.49:0,6,97	0/0:9,0:9:27.09:0,27,443	0/0:13,0:13:36.08:0,36,561	0/0:4,0:4:3.01:0,3,49	0/0:14,0:14:39.08:0,39,588	0/0:22,0:22:63.14:0,63,975	0/0:22,0:22:66.23:0,66,1071	0/0:3,0:3:9.03:0,9,147
chr10	61351999	.	T	TAA	3769.03	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=2.264;DP=541;FS=0.443;HRun=8;HaplotypeScore=65.8206;InbreedingCoeff=0.9003;MQ=59.77;MQ0=8;MQRankSum=-2.412;QD=26.73;ReadPosRankSum=-2.819;VQSLOD=2.7787;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,33:40:91.46:1357,91,0	0/0:12,0:12:36.07:0,36,389	0/0:13,0:6:15.03:0,15,167	0/1:16,0:11:6.90:7,0,175	1/1:1,25:27:62.02:948,62,0	0/0:23,0:23:63.16:0,63,702	0/0:11,0:11:33.09:0,33,368	1/1:13,16:26:45.11:647,45,0	1/1:1,11:12:23.87:381,24,0	0/0:14,0:14:39.09:0,39,435	0/0:24,0:24:57.14:0,57,627	0/0:12,0:12:36.10:0,36,401	0/0:20,0:20:51.10:0,51,557	0/0:19,0:19:48.13:0,48,535	0/0:12,0:12:36.10:0,36,401	0/0:15,0:15:42.11:0,42,468	0/0:21,0:21:54.12:0,54,591	1/1:4,11:16:27.09:428,27,0	0/0:28,0:25:69.16:0,69,760	0/0:23,0:23:66.17:0,66,736	0/0:19,0:19:45.10:0,45,502	0/0:18,0:18:54.15:0,54,602	0/0:19,0:19:51.12:0,51,559	0/0:15,0:15:36.09:0,36,401	0/0:12,0:12:33.07:0,33,360	0/0:23,0:23:60.15:0,60,669	0/0:36,0:36:99:0,102,1137	0/0:10,0:10:24.05:0,24,267
chr10	61352248	.	C	CA	8909.17	PASS	AB=0.694;AC=46;AF=0.821;AN=56;BaseQRankSum=-8.814;DP=528;FS=13.917;HRun=9;HaplotypeScore=79.5309;InbreedingCoeff=0.5641;MQ=65.55;MQ0=1;MQRankSum=5.095;QD=20.11;ReadPosRankSum=5.321;VQSLOD=4.0619;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:11:12.06:60,12,0	1/1:0,8:8:12.03:133,12,0	0/0:27,0:20:40.92:0,41,330	0/0:22,0:17:32.89:0,33,270	1/1:33,0:33:59.30:246,59,0	1/1:1,19:19:54.15:597,54,0	1/1:2,11:14:27.07:299,27,0	0/0:6,0:32:55.06:0,55,180	1/1:14,0:14:27.91:116,28,0	1/1:4,13:18:41.92:430,42,0	1/1:7,18:25:48.01:491,48,0	1/1:2,19:21:45.06:483,45,0	1/1:0,14:14:33.09:365,33,0	1/1:2,10:12:4.91:273,5,0	1/1:3,11:15:3.86:254,4,0	1/1:3,15:18:42.11:465,42,0	1/1:5,25:34:44.84:727,45,0	0/1:7,0:7:0.02:0,0,0	0/1:3,7:9:18.96:187,0,19	1/1:8,26:34:52.05:765,52,0	1/1:1,8:9:24.06:265,24,0	1/1:4,13:17:39.10:424,39,0	1/1:3,21:24:37.18:638,37,0	1/1:0,10:10:27.07:299,27,0	1/1:2,15:17:10.04:339,10,0	1/1:6,14:20:45.12:494,45,0	0/1:11,19:30:17.98:504,0,18	0/1:0,5:7:1.98:56,0,2
chr10	61352257	.	ACC	A	1033.49	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=8.669;DP=492;FS=26.468;HRun=2;HaplotypeScore=110.9922;InbreedingCoeff=0.9406;MQ=65.54;MQ0=1;MQRankSum=-7.153;QD=23.49;ReadPosRankSum=-2.569;VQSLOD=0.3229;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,2:6:17.87:143,18,0	0/0:8,0:8:15.03:0,15,172	0/0:25,0:19:54.11:0,54,824	0/0:23,0:16:39.85:0,40,581	1/1:7,19:26:74.89:686,75,0	0/0:21,0:20:60.16:0,60,668	0/0:14,0:14:33.09:0,33,388	0/0:33,0:31:93.23:0,93,1113	1/1:1,10:11:32.88:321,33,0	0/0:22,0:22:39.40:0,39,804	0/0:21,0:21:60.15:0,60,743	0/0:23,0:23:54.11:0,54,633	0/0:14,0:14:36.09:0,36,398	0/0:11,0:11:30.08:0,30,341	0/0:13,0:13:30.08:0,30,338	0/0:15,0:15:42.11:0,42,444	0/0:33,0:33:87.22:0,87,970	1/1:0,1:1:3.01:34,3,0	0/0:17,0:13:39.03:0,39,515	0/0:26,0:26:78.21:0,78,894	0/0:9,0:9:27.07:0,27,308	0/0:15,0:15:45.12:0,45,516	0/0:27,0:27:78.21:0,78,931	0/0:11,0:11:30.08:0,30,334	0/0:18,0:18:42.11:0,42,495	0/0:17,0:18:54.03:0,54,606	0/0:24,0:24:69.19:0,69,842	0/0:7,0:7:21.06:0,21,269
chr10	61352262	.	ATACACTG	A	1937.29	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=9.053;DP=495;FS=5.622;HRun=0;HaplotypeScore=151.3828;InbreedingCoeff=0.9136;MQ=64.94;MQ0=1;MQRankSum=-7.795;QD=56.98;ReadPosRankSum=0.702;VQSLOD=3.6504;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,2:4:6.02:138,6,0	0/0:7,0:7:18.06:0,18,705	0/0:25,0:19:50.89:0,51,1755	0/0:20,0:14:34.25:0,34,939	1/1:3,16:19:54.19:1203,54,0	0/0:27,0:26:75.26:0,75,2981	0/0:16,0:16:42.14:0,42,1756	0/0:33,0:31:93.23:0,93,3481	1/1:1,9:10:30.10:671,30,0	0/0:21,0:21:60.20:0,60,2462	0/0:22,0:22:66.23:0,66,2666	0/0:21,0:21:54.14:0,54,1906	0/0:13,0:13:36.12:0,36,1475	0/0:11,0:11:30.10:0,30,1203	0/0:14,0:14:36.12:0,36,1447	0/0:15,0:15:42.14:0,42,1674	0/0:34,0:34:96.33:0,96,3967	1/1:0,1:1:3.01:69,3,0	0/0:19,0:14:42.14:0,42,1599	0/0:25,0:25:75.26:0,75,3054	0/0:10,0:10:30.10:0,30,1201	0/0:16,0:16:48.16:0,48,1923	0/0:29,0:29:84.29:0,84,3458	0/0:11,0:11:33.11:0,33,1350	0/0:16,0:16:42.14:0,42,1725	0/0:19,0:19:57.20:0,57,2332	0/0:26,0:26:75.26:0,75,3098	0/0:7,0:7:21.07:0,21,880
chr10	61352986	.	GGA	G	2597.64	PASS	AB=0.555;AC=5;AF=0.096;AN=52;BaseQRankSum=11.604;DP=717;FS=3.845;HRun=0;HaplotypeScore=96.5713;InbreedingCoeff=0.3447;MQ=54.56;MQ0=24;MQRankSum=-1.556;QD=25.72;ReadPosRankSum=-0.264;VQSLOD=4.2222;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:5,22:27:99:718,0,166	0/0:8,0:8:24.08:0,24,482	./.	./.	0/1:1,29:26:15.43:637,0,15	0/0:28,0:28:84.26:0,84,1635	0/0:21,0:21:63.20:0,63,1189	0/0:38,0:33:96.27:0,96,1830	1/1:0,21:20:48.16:780,48,0	0/0:36,0:35:99:0,105,2124	0/0:25,0:25:69.23:0,69,1344	0/0:24,0:24:72.25:0,72,1445	0/0:35,0:35:99:0,105,2110	0/0:28,0:28:84.29:0,84,1668	0/0:27,0:27:81.28:0,81,1634	0/0:21,0:21:63.22:0,63,1279	0/0:36,0:36:90.27:0,90,1743	0/1:8,15:21:99:585,0,112	0/0:13,0:11:33.10:0,33,604	0/0:33,0:33:99:0,99,1999	0/0:35,0:35:99:0,105,2132	0/0:26,0:26:78.27:0,78,1559	0/0:36,0:36:99:0,108,2144	0/0:18,0:18:51.17:0,51,1027	0/0:24,0:24:72.23:0,72,1416	0/0:38,0:37:99:0,111,2180	0/0:30,0:30:90.31:0,90,1818	0/0:9,0:9:24.08:0,24,488
chr10	61354418	.	TG	T	875.86	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-2.767;DP=575;FS=11.498;HRun=2;HaplotypeScore=130.9031;InbreedingCoeff=0.9889;MQ=86.29;MQ0=0;MQRankSum=-2.360;QD=32.44;ReadPosRankSum=-3.758;VQSLOD=1.1326;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:48.10:0,48,673	0/0:12,0:12:33.11:0,33,495	0/0:19,0:19:54.18:0,54,796	0/0:18,0:18:47.98:0,48,652	0/0:29,0:29:87.27:0,87,1262	0/0:22,0:22:63.17:0,63,899	0/0:10,0:10:30.10:0,30,450	1/1:1,26:27:78.22:971,78,0	0/0:27,0:27:75.24:0,75,1103	0/0:25,0:25:72.23:0,72,1046	0/0:28,0:28:84.28:0,84,1257	0/0:18,0:18:51.16:0,51,743	0/0:22,0:22:63.21:0,63,941	0/0:12,0:12:36.12:0,36,539	0/0:25,0:25:72.24:0,72,1077	0/0:18,0:18:51.16:0,51,746	0/0:12,0:12:36.10:0,36,508	0/0:11,0:11:26.72:0,27,404	0/0:19,0:19:51.12:0,51,730	0/0:33,0:33:99:0,99,1461	0/0:14,0:14:42.13:0,42,609	0/0:20,0:20:60.20:0,60,898	0/0:27,0:27:78.25:0,78,1148	0/0:12,0:12:27.07:0,27,381	0/0:17,0:17:48.16:0,48,719	0/0:30,0:30:87.29:0,87,1303	0/0:44,0:44:99:0,120,1737	0/0:6,0:6:18.06:0,18,270
chr10	61354681	.	AC	A	2124.15	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=10.689;DP=528;FS=2.999;HRun=1;HaplotypeScore=55.3536;InbreedingCoeff=0.9791;MQ=69.30;MQ0=2;MQRankSum=-1.188;QD=27.95;ReadPosRankSum=0.064;VQSLOD=3.3666;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,12:14:8.77:293,9,0	0/0:10,0:10:30.09:0,30,401	0/0:22,0:16:27.65:0,28,337	0/0:26,0:20:23.13:0,23,317	1/1:0,31:31:84.09:1078,84,0	0/0:29,0:29:87.24:0,87,1159	0/0:13,0:13:39.09:0,39,492	0/0:30,0:30:90.20:0,90,1155	1/1:0,10:10:21.07:293,21,0	0/0:29,0:29:87.25:0,87,1150	0/0:22,0:22:64.10:0,64,879	0/0:16,0:16:48.12:0,48,616	0/0:12,0:12:36.10:0,36,484	0/0:13,0:13:38.42:0,38,485	0/0:17,0:17:51.16:0,51,694	0/0:10,0:10:27.05:0,27,341	0/0:11,0:11:23.17:0,23,323	1/1:2,19:21:38.89:616,39,0	0/0:23,0:22:66.22:0,66,918	0/0:41,0:41:99:0,123,1606	0/0:11,0:10:33.11:0,33,459	0/0:11,0:11:33.07:0,33,423	0/0:20,0:20:60.17:0,60,798	0/0:14,0:14:39.11:0,39,527	0/0:16,0:16:48.12:0,48,619	0/0:25,0:25:75.23:0,75,1013	0/0:21,0:21:63.21:0,63,878	0/0:10,0:10:29.95:0,30,336
chr10	61355296	.	A	AT	1685.29	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=2.087;DP=473;FS=2.539;HRun=8;HaplotypeScore=46.1500;InbreedingCoeff=0.9570;MQ=61.71;MQ0=2;MQRankSum=-0.581;QD=20.06;ReadPosRankSum=1.309;VQSLOD=3.4160;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,22:26:60.01:668,60,0	0/0:13,0:13:24:0,24,220	0/0:24,0:8:11.91:0,12,100	0/0:20,0:7:11.76:0,12,80	1/1:5,19:24:51.14:573,51,0	0/0:15,0:15:33.02:0,33,302	0/0:14,0:14:36.02:0,36,329	0/0:34,0:33:72.02:0,72,658	1/1:4,13:17:24.07:277,24,0	0/0:19,0:19:33.01:0,33,302	0/0:21,0:22:43:0,43,376	0/0:9,0:9:18.01:0,18,165	0/0:11,0:11:24.01:0,24,219	0/0:12,0:12:29.93:0,30,264	0/0:13,0:13:36.02:0,36,329	0/0:13,0:13:39.02:0,39,357	0/0:30,0:30:65.93:0,66,581	1/1:4,11:14:29.98:327,30,0	0/0:15,0:14:27.01:0,27,247	0/0:17,0:17:38.39:0,38,338	0/0:12,0:12:33:0,33,297	0/0:3,0:3:9:0,9,82	0/0:9,0:9:24.01:0,24,219	0/0:20,0:20:45.01:0,45,411	0/0:13,0:13:30.02:0,30,275	0/0:23,0:23:57.01:0,57,516	0/0:23,0:23:59.99:0,60,542	0/0:5,0:5:15.01:0,15,137
chr10	61357528	.	AT	A	3194.93	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=13.970;DP=648;FS=0.000;HRun=2;HaplotypeScore=69.0541;InbreedingCoeff=0.9992;MQ=79.65;MQ0=0;MQRankSum=-2.489;QD=29.86;ReadPosRankSum=3.965;VQSLOD=3.2492;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,37:37:84.27:1082,84,0	0/0:12,0:12:36.10:0,36,476	0/0:26,0:25:55.67:0,56,755	0/0:16,0:16:29.12:0,29,358	1/1:0,36:36:99:1252,99,0	0/0:28,0:27:81.25:0,81,1112	0/0:17,0:17:51.17:0,51,722	0/0:31,0:31:79.51:0,80,1097	1/1:1,22:23:57.08:712,57,0	0/0:24,0:24:69.22:0,69,949	0/0:20,0:20:60.19:0,60,825	0/0:22,0:22:63.15:0,63,804	0/0:23,0:23:69.19:0,69,922	0/0:25,0:25:72.21:0,72,970	0/0:25,0:25:72.20:0,72,966	0/0:13,0:13:39.11:0,39,519	0/0:23,0:22:69.19:0,69,937	1/1:1,10:11:24.08:309,24,0	0/0:20,0:20:60.13:0,60,773	0/0:28,0:28:84.27:0,84,1171	0/0:36,0:36:99:0,108,1455	0/0:29,0:29:87.26:0,87,1195	0/0:22,0:22:60.17:0,60,800	0/0:25,0:25:75.18:0,75,973	0/0:17,0:17:51.17:0,51,722	0/0:21,0:21:60.18:0,60,818	0/0:24,0:24:72.14:0,72,925	0/0:14,0:14:39.11:0,39,531
chr10	61358064	.	G	GTC	1199.41	PASS	AB=0.939;AC=14;AF=0.250;AN=56;BaseQRankSum=12.743;DP=542;FS=6.547;HRun=0;HaplotypeScore=108.4981;InbreedingCoeff=-0.1149;MQ=53.99;MQ0=14;MQRankSum=-0.973;QD=5.26;ReadPosRankSum=12.295;VQSLOD=0.0989;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:25,3:28:4.43:231,4,0	1/1:7,0:7:0.88:2,1,0	0/0:25,0:9:19.48:0,19,159	0/0:44,0:19:43.92:0,44,434	0/1:16,21:37:23.26:786,0,23	0/0:18,0:18:3.09:0,3,60	0/0:13,0:13:17.95:0,18,145	0/0:29,0:28:33.99:0,34,513	0/1:10,5:15:65.67:170,0,66	0/0:16,0:16:15.78:0,16,238	0/1:22,0:22:2.98:3,0,139	0/0:10,0:10:6.97:0,7,68	0/0:14,0:14:27.75:0,28,225	0/0:15,0:15:4.24:0,4,120	0/1:14,0:13:2.73:3,0,122	0/0:13,0:13:12.72:0,13,114	0/1:22,0:22:23.90:24,0,82	0/1:9,0:9:23.71:48,0,24	0/0:23,0:23:4.75:0,5,274	0/1:25,0:25:26.84:27,0,163	0/0:22,0:22:8.80:0,9,260	0/0:14,0:13:5.74:0,6,86	0/0:18,0:17:13.11:0,13,159	0/0:20,0:20:0.19:0,0,93	0/1:13,0:13:22.29:22,0,77	0/1:21,0:21:13.18:13,0,244	0/0:20,0:20:6.55:0,7,138	0/1:15,0:15:7.46:7,0,13
chr10	61358076	.	G	GTGTC	5076.73	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=10.287;DP=515;FS=1.582;HRun=0;HaplotypeScore=105.4417;InbreedingCoeff=-0.4289;MQ=56.24;MQ0=12;MQRankSum=-2.701;QD=12.44;ReadPosRankSum=9.732;VQSLOD=2.8543;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:24,3:27:3.22:261,3,0	1/1:7,0:7:3.01:47,3,0	0/0:32,0:16:39.19:0,39,360	0/0:38,0:17:30.59:0,31,349	1/1:14,18:34:74.85:1300,75,0	0/1:18,0:18:22.27:22,0,56	0/0:10,0:10:9.45:0,9,73	0/0:26,0:25:12.88:0,13,273	1/1:11,5:16:30.03:436,30,0	0/1:18,0:18:99:142,0,210	0/1:21,0:21:99:161,0,112	0/1:10,0:10:54.87:83,0,55	0/1:6,0:6:11.93:116,0,12	0/1:17,0:17:99:295,0,118	0/1:12,0:12:53.86:123,0,54	0/1:13,0:13:56.23:121,0,56	0/1:24,0:24:90.11:158,0,90	0/1:11,0:11:35.75:49,0,36	0/1:18,0:18:99:182,0,133	0/1:25,0:25:99:446,0,131	0/1:16,0:16:76.96:77,0,125	0/1:14,0:13:24.27:24,0,59	0/1:17,0:16:18.22:18,0,95	0/1:18,0:18:56.14:61,0,56	0/1:13,0:13:60.67:226,0,61	0/1:20,0:20:99:151,0,165	0/1:18,0:18:63.97:219,0,64	1/1:15,0:15:4.11:356,4,0
chr10	61358158	.	TGTTGGTTG	T	2563.68	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=6.121;DP=445;FS=7.050;HRun=0;HaplotypeScore=123.7116;InbreedingCoeff=0.9570;MQ=64.04;MQ0=0;MQRankSum=-7.278;QD=50.27;ReadPosRankSum=0.053;VQSLOD=2.5936;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:19:18.06:0,18,486	0/0:9,0:9:27.09:0,27,1144	0/0:19,0:15:26.24:0,26,911	0/0:29,0:24:44.93:0,45,1284	0/0:25,0:25:61.97:0,62,1418	1/1:8,5:13:33.01:681,33,0	1/1:2,7:9:27.07:603,27,0	0/0:12,0:12:21.07:0,21,868	0/0:16,0:15:23.97:0,24,642	0/0:15,0:15:39.13:0,39,1650	0/0:29,0:29:78.25:0,78,3157	0/0:16,0:16:45.15:0,45,1750	0/0:12,0:12:36.12:0,36,1447	0/0:16,0:16:36.12:0,36,1523	0/0:12,0:12:33.11:0,33,1399	0/0:18,0:18:48.15:0,48,1797	0/0:14,0:14:39.11:0,39,1365	0/0:7,0:7:6.02:0,6,143	0/0:17,0:17:39.13:0,39,1462	0/0:26,0:26:69.20:0,69,2376	0/0:4,0:4:12.04:0,12,509	1/1:3,6:9:23.95:489,24,0	1/1:3,9:12:30.08:693,30,0	1/1:5,3:8:14.88:271,15,0	0/0:20,0:20:57.19:0,57,2090	0/0:29,0:29:81.26:0,81,3208	0/0:23,0:23:69.21:0,69,2739	0/0:6,0:6:15.05:0,15,587
chr10	61358162	.	G	GGTTGGTT	4511.90	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=0.627;DP=447;FS=1.918;HRun=0;HaplotypeScore=115.8211;InbreedingCoeff=0.9616;MQ=63.80;MQ0=0;MQRankSum=-8.797;QD=60.97;ReadPosRankSum=-1.951;VQSLOD=4.7445;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,15:20:26.92:882,27,0	0/0:9,0:9:27.09:0,27,669	0/0:16,0:13:32.98:0,33,589	0/0:32,0:27:53.26:0,53,866	1/1:5,22:27:69.02:2193,69,0	0/0:13,0:13:16.53:0,17,405	0/0:9,0:9:19.07:0,19,341	0/0:10,0:10:21.07:0,21,502	1/1:5,13:17:33.11:1226,33,0	0/0:14,0:14:42.14:0,42,993	0/0:29,0:29:81.26:0,81,1882	0/0:17,0:17:48.15:0,48,1048	0/0:12,0:12:36.12:0,36,861	0/0:15,0:15:36.12:0,36,881	0/0:12,0:12:36.11:0,36,843	0/0:17,0:17:48.16:0,48,1066	0/0:14,0:14:36.12:0,36,827	1/1:5,3:8:8.62:210,9,0	0/0:16,0:16:39.13:0,39,855	0/0:25,0:25:69.24:0,69,1479	0/0:4,0:4:12.04:0,12,297	0/0:9,0:9:24.08:0,24,366	0/0:12,0:12:29.97:0,30,428	0/0:7,0:7:18.02:0,18,253	0/0:22,0:22:60.19:0,60,1315	0/0:29,0:29:84.28:0,84,1959	0/0:23,0:23:69.24:0,69,1647	0/0:6,0:6:18.04:0,18,364
chr10	61358209	.	TTA	T	2225.96	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=10.065;DP=430;FS=9.359;HRun=0;HaplotypeScore=78.1306;InbreedingCoeff=0.9138;MQ=71.81;MQ0=4;MQRankSum=-5.520;QD=34.25;ReadPosRankSum=-0.863;VQSLOD=5.4643;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,16:15:39.09:566,39,0	0/0:11,0:11:33.10:0,33,593	0/0:28,0:16:10.39:0,10,289	0/0:26,0:17:19.75:0,20,335	1/1:7,21:28:75.25:1088,75,0	0/0:12,0:12:36.11:0,36,615	0/0:9,0:9:21.07:0,21,386	0/0:15,0:15:45.15:0,45,838	1/1:4,16:19:48.16:715,48,0	0/0:19,0:19:51.16:0,51,907	0/0:18,0:18:54.17:0,54,970	0/0:16,0:16:45.12:0,45,770	0/0:6,0:6:18.06:0,18,341	0/0:13,0:13:39.10:0,39,657	0/0:11,0:11:33.10:0,33,594	0/0:8,0:8:24.08:0,24,455	0/0:20,0:20:60.20:0,60,1117	0/0:3,0:3:2.49:0,2,9	0/0:15,0:15:45.15:0,45,798	0/0:20,0:20:60.17:0,60,1050	0/0:7,0:7:21.05:0,21,349	0/0:6,0:6:18.06:0,18,310	0/0:14,0:14:42.12:0,42,698	0/0:8,0:8:21.07:0,21,332	0/0:21,0:21:63.20:0,63,1147	0/0:22,1:23:23.78:0,24,1190	0/0:28,0:27:81.14:0,81,1361	0/0:7,0:7:18.06:0,18,325
chr10	61358215	.	AT	A	2243.09	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=11.265;DP=440;FS=0.000;HRun=8;HaplotypeScore=71.4555;InbreedingCoeff=0.9593;MQ=73.46;MQ0=5;MQRankSum=-4.296;QD=18.09;ReadPosRankSum=1.855;VQSLOD=3.5289;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,14:16:30.03:285,30,0	0/0:12,0:12:30.09:0,30,362	0/0:32,0:18:34.45:0,34,275	0/0:26,0:16:25.07:0,25,230	1/1:10,17:27:59.95:540,60,0	1/1:2,15:17:30.05:290,30,0	1/1:0,8:8:24.04:231,24,0	0/0:16,0:16:39.10:0,39,451	1/1:6,15:20:47.99:441,48,0	0/0:20,0:20:54.17:0,54,650	0/0:18,0:18:36.11:0,36,434	0/0:12,0:12:30.09:0,30,362	0/0:7,0:7:21.06:0,21,250	0/0:11,0:11:30.07:0,30,340	0/0:10,0:10:30.08:0,30,353	0/0:8,0:8:21.06:0,21,254	0/0:22,0:22:60.18:0,60,723	1/1:3,0:3:2.99:28,3,0	0/0:16,0:16:30.07:0,30,340	0/0:21,0:21:51.15:0,51,604	0/0:7,0:7:21.06:0,21,253	1/1:1,5:6:15.02:145,15,0	1/1:3,13:16:39.06:376,39,0	1/1:3,5:8:12.01:116,12,0	0/0:21,0:21:60.18:0,60,724	0/0:25,1:26:43.63:0,44,793	0/0:25,0:24:66.20:0,66,796	0/0:6,0:6:15.05:0,15,181
chr10	61358656	.	G	GGCATATGTGT	7647.80	PASS	AB=0.955;AC=9;AF=0.161;AN=56;BaseQRankSum=-4.316;DP=606;FS=3.332;HRun=0;HaplotypeScore=184.1135;InbreedingCoeff=0.8632;MQ=93.76;MQ0=0;MQRankSum=-11.699;QD=73.54;ReadPosRankSum=-1.616;VQSLOD=4.4285;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,16:26:45.15:2343,45,0	0/0:9,0:9:27.09:0,27,818	0/0:31,0:30:77.29:0,77,2324	0/0:29,0:28:72.19:0,72,2031	1/1:6,21:29:45.13:2356,45,0	0/0:19,0:19:54.19:0,54,1771	0/0:28,0:28:79.50:0,79,2437	0/0:24,0:24:60.20:0,60,1845	1/1:11,7:20:39.13:1873,39,0	0/0:32,0:32:87.29:0,87,2740	0/0:25,0:25:72.23:0,72,2121	0/0:19,0:19:51.18:0,51,1654	0/0:28,0:28:81.28:0,81,2580	0/0:15,0:15:45.15:0,45,1431	0/0:28,0:28:84.26:0,84,2673	0/1:20,1:21:98.11:98,0,1684	0/0:28,0:28:81.18:0,81,2497	1/1:2,5:8:21.06:977,21,0	0/0:9,0:9:21.07:0,21,682	0/0:29,0:29:84.27:0,84,2574	0/0:20,0:20:57.20:0,57,1820	0/0:24,0:24:54.19:0,54,1780	0/0:21,0:21:60.21:0,60,1929	0/0:9,0:9:27.09:0,27,881	0/0:19,0:19:57.20:0,57,1851	0/0:25,0:25:72.25:0,72,2322	0/0:25,0:23:72.23:0,72,2276	0/0:6,0:6:18.06:0,18,593
chr10	61358864	.	C	CA	2277.60	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=12.666;DP=646;FS=6.164;HRun=7;HaplotypeScore=66.6481;InbreedingCoeff=0.9969;MQ=79.18;MQ0=0;MQRankSum=-2.137;QD=28.12;ReadPosRankSum=-0.684;VQSLOD=4.0853;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,24:24:66.20:797,66,0	0/0:10,0:10:30.05:0,30,290	0/0:17,0:17:24.01:0,24,224	0/0:15,0:15:36.51:0,37,341	1/1:2,24:26:37.28:698,37,0	0/0:23,0:23:69.11:0,69,665	0/0:24,0:24:63.09:0,63,608	0/0:31,0:31:81.12:0,81,778	1/1:2,23:25:60.18:725,60,0	0/0:38,0:38:93.13:0,93,895	0/0:24,0:24:69.10:0,69,662	0/0:15,0:15:36.05:0,36,348	0/0:31,0:31:84.12:0,84,806	0/0:28,0:28:78.12:0,78,753	0/0:19,0:19:57.09:0,57,550	0/0:18,0:18:51.08:0,51,493	0/0:14,0:14:39.04:0,39,370	1/1:0,6:6:18.06:217,18,0	0/0:23,0:23:48.04:0,48,457	0/0:35,0:35:99:0,99,956	0/0:20,0:20:54.08:0,54,521	0/0:27,0:27:72.09:0,72,684	0/0:27,0:27:69.10:0,69,666	0/0:15,0:15:45.05:0,45,428	0/0:23,0:23:63.08:0,63,598	0/0:39,0:39:99:0,105,1009	0/0:33,0:33:87.12:0,87,834	0/0:16,0:16:48.08:0,48,464
chr10	61360527	.	G	GATCA	6431.15	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-10.265;DP=662;FS=1.973;HRun=0;HaplotypeScore=103.8217;InbreedingCoeff=0.9633;MQ=77.46;MQ0=0;MQRankSum=-4.318;QD=63.05;ReadPosRankSum=0.675;VQSLOD=6.9003;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,23:27:63.22:1677,63,0	0/0:4,0:4:9.03:0,9,168	0/0:17,0:17:48.10:0,48,845	0/0:15,0:15:45.15:0,45,818	1/1:6,32:40:96.24:2437,96,0	0/0:26,0:26:75.26:0,75,1385	0/0:17,0:17:51.17:0,51,952	0/0:40,0:39:99:0,108,1879	1/1:2,29:31:78.27:2078,78,0	0/0:34,0:34:81.24:0,81,1472	0/0:27,0:27:78.27:0,78,1447	0/0:30,0:30:87.26:0,87,1550	0/0:18,0:18:51.16:0,51,920	0/0:18,0:18:54.16:0,54,946	0/0:19,0:19:54.19:0,54,1003	0/0:17,0:17:45.14:0,45,809	0/0:29,0:29:81.26:0,81,1448	1/1:1,3:4:9.03:240,9,0	0/0:21,0:21:57.18:0,57,1008	0/0:30,0:30:87.30:0,87,1617	0/0:21,0:21:57.19:0,57,1047	0/0:22,0:22:66.21:0,66,1190	0/0:34,0:34:99:0,99,1783	0/0:23,0:23:66.19:0,66,1168	0/0:32,0:32:84.27:0,84,1527	0/0:34,0:34:96.33:0,96,1792	0/0:27,0:27:78.27:0,78,1424	0/0:5,0:5:15.05:0,15,280
chr10	61362139	.	CA	C	1499.12	PASS	AB=0.857;AC=9;AF=0.161;AN=56;BaseQRankSum=10.129;DP=572;FS=1.611;HRun=9;HaplotypeScore=53.3503;InbreedingCoeff=0.8421;MQ=77.95;MQ0=0;MQRankSum=-4.102;QD=19.99;ReadPosRankSum=0.209;VQSLOD=3.9306;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,20:21:57.03:522,57,0	0/0:14,0:14:36.11:0,36,415	0/0:20,0:20:42.09:0,42,446	0/1:5,1:6:11.91:12,0,115	1/1:1,29:30:75.02:686,75,0	0/0:31,0:31:93.28:0,93,1073	0/0:13,0:13:39.12:0,39,450	0/0:27,1:28:38.68:0,39,676	1/1:2,13:15:39.02:357,39,0	0/0:31,0:31:81.22:0,81,919	0/0:15,1:16:17.67:0,18,457	0/0:18,0:18:48.14:0,48,554	0/0:16,0:16:45.13:0,45,519	0/0:15,0:15:33.10:0,33,381	0/0:33,0:33:96.29:0,96,1108	0/0:12,0:12:36.09:0,36,404	0/0:16,0:16:45.56:0,46,505	1/1:0,3:3:9:82,9,0	0/0:17,0:17:39.10:0,39,436	0/0:33,0:33:87.26:0,87,1004	0/0:18,0:18:54.16:0,54,623	0/0:39,0:39:99:0,105,1212	0/0:30,1:31:62.76:0,63,960	0/0:7,0:7:21.05:0,21,233	0/0:29,0:29:84.25:0,84,970	0/0:24,0:24:63.19:0,63,727	0/0:30,2:32:59.78:0,60,933	0/0:4,0:4:9.03:0,9,104
chr10	61362559	.	A	AAG	595.41	PASS	AB=0.983;AC=11;AF=0.196;AN=56;BaseQRankSum=7.380;DP=493;FS=1.979;HRun=0;HaplotypeScore=81.6455;InbreedingCoeff=0.4928;MQ=71.91;MQ0=9;MQRankSum=-2.913;QD=5.46;ReadPosRankSum=-1.058;VQSLOD=2.8391;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:20:38.77:319,39,0	0/1:6,0:6:8.36:8,0,58	0/0:16,0:14:35.11:0,35,338	0/0:33,0:29:54.06:0,54,624	1/1:9,0:9:17.98:149,18,0	0/0:15,0:15:20.98:0,21,178	0/0:22,0:21:50.83:0,51,430	0/0:21,0:21:50.77:0,51,470	1/1:1,25:26:12.04:224,12,0	0/0:15,0:15:23.80:0,24,307	0/0:10,0:10:14.24:0,14,123	0/0:14,0:13:25.93:0,26,202	0/0:14,0:14:3.23:0,3,149	0/1:10,0:10:2.89:3,0,97	0/0:26,0:26:53.33:0,53,446	0/0:17,0:17:9.43:0,9,178	0/1:19,0:19:1.38:1,0,133	0/1:5,0:5:5.42:36,0,5	0/0:32,0:30:40.93:0,41,550	0/0:22,0:22:24.80:0,25,326	0/0:30,0:29:55.85:0,56,461	0/1:12,0:12:5.29:5,0,191	0/0:10,0:8:8.59:0,9,71	0/0:20,0:20:27.36:0,27,350	0/0:17,0:17:16.45:0,16,256	0/0:17,0:17:44.78:0,45,405	0/0:24,0:24:18.03:0,18,312	0/0:8,0:8:20.98:0,21,210
chr10	61362560	.	A	AGTGTGT	1474.67	PASS	AB=0.875;AC=36;AF=0.692;AN=52;BaseQRankSum=-3.324;DP=536;FS=11.818;HRun=0;HaplotypeScore=129.1418;InbreedingCoeff=0.2843;MQ=68.63;MQ0=11;MQRankSum=-1.140;QD=3.66;ReadPosRankSum=-1.307;VQSLOD=1.8430;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:24:8.97:84,9,0	1/1:3,0:6:3.90:40,4,0	./.	./.	1/1:11,0:11:3.01:77,3,0	0/0:8,0:13:9.03:0,9,125	0/0:24,0:22:12.04:0,12,185	1/1:21,0:21:1.55:4,2,0	0/0:27,0:26:11.53:0,12,60	1/1:15,0:17:5.90:59,6,0	1/1:7,0:12:3.01:38,3,0	1/1:14,0:13:6:63,6,0	1/1:14,0:14:18:188,18,0	1/1:9,0:12:2.19:37,2,0	1/1:29,0:29:15.05:281,15,0	1/1:11,6:19:8.70:287,9,0	0/1:9,0:25:26.38:67,0,26	1/1:7,0:6:3.01:47,3,0	0/1:34,0:32:11.07:125,0,11	1/1:18,0:25:2.15:37,2,0	1/1:25,0:33:3.48:39,3,0	0/0:9,0:12:0.88:0,1,2	0/1:9,0:8:0:0,0,0	0/1:18,0:25:0.61:1,0,55	0/1:15,0:18:69.86:70,0,72	0/1:18,0:18:2.56:3,0,54	1/1:18,0:26:5.41:76,5,0	0/0:7,0:8:9.03:0,9,162
chr10	61363634	.	TA	T	1661.21	PASS	AB=0.917;AC=12;AF=0.214;AN=56;BaseQRankSum=10.042;DP=488;FS=0.000;HRun=11;HaplotypeScore=48.9456;InbreedingCoeff=0.8102;MQ=70.88;MQ0=1;MQRankSum=1.151;QD=12.58;ReadPosRankSum=-1.644;VQSLOD=2.6337;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,22:23:50.94:419,51,0	0/0:6,0:6:15.03:0,15,154	0/0:9,0:6:12.01:0,12,114	0/1:13,0:11:6.50:6,0,44	1/1:3,21:25:32.91:460,33,0	0/0:23,0:23:63.16:0,63,671	0/0:10,1:11:5.29:0,5,238	1/1:5,19:25:26.90:403,27,0	1/1:5,21:26:47.93:394,48,0	0/0:30,0:30:75.19:0,75,800	0/0:17,1:18:20.47:0,20,423	0/0:10,0:10:24.06:0,24,256	0/0:15,0:16:35.26:0,35,402	0/0:15,1:16:14.45:0,14,359	0/0:13,0:13:33.08:0,33,350	0/0:9,0:9:21.03:0,21,211	0/0:22,1:23:35.50:0,35,574	1/1:3,6:10:19.98:154,20,0	0/0:9,0:10:23.89:0,24,238	0/0:28,1:30:38.34:0,38,591	0/0:12,0:12:30.08:0,30,320	0/0:17,1:18:17.44:0,17,377	0/0:20,1:21:20.03:0,20,385	0/1:8,0:10:0.04:0,0,169	0/0:29,1:30:50.56:0,51,743	0/0:21,0:21:42.09:0,42,438	0/0:20,1:21:23.48:0,23,455	0/0:7,0:9:17.75:0,18,157
chr10	61364102	.	T	TAACAGTGAGTAACAGCAGTG	10846.54	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-1.649;DP=563;FS=5.900;HRun=0;HaplotypeScore=263.5700;InbreedingCoeff=0.9647;MQ=87.07;MQ0=1;MQRankSum=-10.020;QD=114.17;ReadPosRankSum=0.856;VQSLOD=3.8981;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,5:28:30.10:2509,30,0	0/0:7,0:7:18.05:0,18,797	0/0:18,0:18:40.70:0,41,1979	0/0:24,0:24:68.22:0,68,2414	1/1:14,7:24:30.10:2758,30,0	0/0:19,0:19:54.17:0,54,2474	0/0:12,0:12:36.11:0,36,1506	0/0:25,0:25:69.22:0,69,2921	1/1:9,12:39:60.21:5460,60,0	0/0:27,0:27:72.23:0,72,3164	0/0:17,0:17:51.18:0,51,2487	0/0:18,0:18:51.16:0,51,2549	0/0:18,0:18:51.18:0,51,2612	0/0:19,0:19:57.20:0,57,2862	0/0:10,0:10:27.09:0,27,1414	0/0:19,0:19:51.18:0,51,2647	0/0:20,0:20:54.19:0,54,2794	1/1:3,0:3:5.98:119,6,0	0/0:24,0:24:66.21:0,66,2803	0/0:36,0:36:99:0,108,5080	0/0:27,0:27:72.19:0,72,3306	0/0:10,0:10:30.09:0,30,1146	0/0:23,0:23:63.22:0,63,3175	0/0:12,0:12:36.12:0,36,1853	0/0:24,0:23:66.22:0,66,3273	0/0:27,0:27:78.25:0,78,3862	0/0:26,0:26:75.26:0,75,3649	0/0:6,0:6:18.05:0,18,870
chr10	61364588	.	AAGTTCTATGTACTATCTAACC	A	7968.75	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=11.774;DP=685;FS=13.827;HRun=0;HaplotypeScore=351.9938;InbreedingCoeff=0.9687;MQ=82.87;MQ0=0;MQRankSum=-10.538;QD=96.01;ReadPosRankSum=0.929;VQSLOD=3.4713;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,14:14:21.07:940,21,0	0/0:14,0:14:42.14:0,42,3852	0/0:33,0:33:87.28:0,87,5227	0/0:19,0:19:57.19:0,57,3963	1/1:0,24:24:63.17:2989,63,0	0/0:24,0:24:72.25:0,72,6498	0/0:21,0:21:60.15:0,60,3942	0/0:41,0:41:99:0,120,8848	1/1:0,39:39:63.19:3683,63,0	0/0:35,0:35:99:0,99,8742	0/0:21,0:21:63.22:0,63,5071	0/0:24,0:24:72.25:0,72,6666	0/0:26,0:26:75.26:0,75,6620	0/0:26,0:26:78.25:0,78,6058	0/0:22,0:22:66.23:0,66,5979	0/0:18,0:18:54.18:0,54,4450	0/0:20,0:20:57.20:0,57,4965	1/1:0,6:6:6.02:357,6,0	0/0:23,0:23:66.23:0,66,4639	0/0:32,0:32:93.32:0,93,7313	0/0:31,0:31:93.32:0,93,8689	0/0:22,0:22:66.23:0,66,6032	0/0:16,0:16:48.16:0,48,4537	0/0:22,0:22:66.18:0,66,5497	0/0:23,0:23:69.24:0,69,6269	0/0:38,0:38:99:0,111,9734	0/0:39,0:39:99:0,117,10650	0/0:12,0:12:27.09:0,27,2154
chr10	61365150	.	AG	A	743.45	PASS	AC=8;AF=0.148;AN=54;BaseQRankSum=6.837;DP=255;FS=12.893;HRun=2;HaplotypeScore=68.0164;InbreedingCoeff=0.8763;MQ=46.90;MQ0=0;MQRankSum=-4.632;QD=23.98;ReadPosRankSum=0.902;VQSLOD=2.1956;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,8:8:15.05:178,15,0	0/0:4,0:4:11.63:0,12,65	./.	0/0:5,0:5:15.04:0,15,182	1/1:0,13:13:32.92:353,33,0	0/0:11,0:11:32.11:0,32,217	0/0:8,0:8:23.48:0,23,173	0/0:21,0:21:51.02:0,51,593	1/1:0,8:8:24.07:287,24,0	0/0:16,0:16:44.35:0,44,305	0/0:8,0:8:16.93:0,17,137	0/0:8,0:8:17.06:0,17,121	0/0:6,0:6:17.17:0,17,88	0/0:8,0:8:20.39:0,20,168	0/0:9,0:9:23.40:0,23,172	0/0:13,0:13:34.71:0,35,226	0/0:5,0:5:3.01:0,3,34	1/1:0,2:2:6.02:74,6,0	0/0:9,0:9:26.73:0,27,241	0/0:12,0:12:34.03:0,34,201	0/0:6,0:6:14.71:0,15,121	0/0:8,0:8:23.42:0,23,190	0/0:12,0:12:30.94:0,31,201	0/0:5,0:5:11.82:0,12,102	0/0:10,0:10:29.35:0,29,233	0/0:10,0:10:24.85:0,25,189	0/0:25,0:25:68.56:0,69,521	0/0:5,0:5:14.85:0,15,109
chr10	61373309	.	C	CA	8098.02	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=5.149;DP=671;FS=12.923;HRun=2;HaplotypeScore=218.9973;InbreedingCoeff=0.9902;MQ=87.04;MQ0=0;MQRankSum=-5.748;QD=12.98;ReadPosRankSum=4.740;VQSLOD=2.4420;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:22:47.19:236,47,0	1/1:16,0:16:25.97:178,26,0	0/0:22,0:22:62.59:0,63,505	0/0:25,0:25:34.43:0,34,469	1/1:25,1:26:55.19:317,55,0	1/1:33,0:33:76.92:397,77,0	1/1:18,1:19:46.26:295,46,0	1/1:36,0:36:99:692,105,0	1/1:26,0:26:54.76:294,55,0	1/1:37,1:38:99:737,105,0	1/1:15,0:15:32.78:167,33,0	1/1:16,0:16:42.51:235,43,0	1/1:26,2:28:56.99:375,57,0	1/1:15,0:15:26.99:209,27,0	1/1:34,0:34:86.44:455,86,0	1/1:21,0:20:53.57:270,54,0	1/1:22,0:22:50.06:233,50,0	1/1:17,0:17:16.84:73,17,0	1/1:21,1:22:45.60:362,46,0	1/1:24,2:26:61.93:359,62,0	1/1:20,0:20:45.95:225,46,0	1/1:30,0:30:67.69:390,68,0	1/1:30,0:30:33.09:291,33,0	1/1:26,0:26:61.94:300,62,0	1/1:16,1:17:26.50:111,27,0	1/1:24,1:25:69.33:456,69,0	1/1:32,0:31:69.73:352,70,0	1/1:12,0:12:20.93:88,21,0
chr10	61373822	.	CAT	C	2028.04	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=3.151;DP=489;FS=6.604;HRun=0;HaplotypeScore=225.4952;InbreedingCoeff=0.9658;MQ=67.36;MQ0=0;MQRankSum=-7.055;QD=26.00;ReadPosRankSum=0.346;VQSLOD=3.6325;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,29:32:63.17:896,63,0	0/0:14,0:14:24.08:0,24,462	0/0:15,0:15:45.15:0,45,855	0/0:9,0:9:27.09:0,27,495	1/1:2,20:22:38.76:519,39,0	0/0:13,0:13:36.12:0,36,692	0/0:8,0:8:21.07:0,21,404	0/0:21,0:21:56.77:0,57,1069	1/1:1,20:21:45.15:676,45,0	0/0:32,0:32:93.26:0,93,1702	0/0:14,0:14:42.14:0,42,803	0/0:23,0:23:69.24:0,69,1298	0/0:21,0:20:54.19:0,54,1026	0/0:13,0:13:30.10:0,30,567	0/0:21,0:21:57.20:0,57,1095	0/0:19,0:18:51.17:0,51,981	0/0:18,0:18:45.15:0,45,867	1/1:0,3:3:6.02:90,6,0	0/0:19,0:19:54.18:0,54,1001	0/0:30,0:30:87.28:0,87,1627	0/0:11,0:11:27.09:0,27,519	0/0:25,0:25:72.23:0,72,1311	0/0:10,0:10:30.10:0,30,577	0/0:14,0:14:30.10:0,30,578	0/0:9,0:9:21.07:0,21,404	0/0:21,0:21:60.21:0,60,1147	0/0:23,0:22:60.21:0,60,1153	0/0:8,0:8:24.08:0,24,462
chr10	61373885	.	A	AC	763.78	PASS	AB=0.990;AC=30;AF=0.536;AN=56;BaseQRankSum=6.746;DP=470;FS=6.739;HRun=0;HaplotypeScore=228.0206;InbreedingCoeff=-0.3729;MQ=81.79;MQ0=0;MQRankSum=-6.090;QD=1.90;ReadPosRankSum=13.673;VQSLOD=-0.1697;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:23:24.87:25,0,158	0/1:12,0:12:17.40:36,0,17	0/0:19,0:19:48.76:0,49,330	0/0:26,0:26:38.66:0,39,328	0/1:14,0:14:15.31:15,0,38	0/1:13,0:13:15.52:25,0,16	1/1:16,0:16:0.56:35,1,0	0/1:22,0:22:5.53:6,0,64	0/1:26,0:26:33.96:34,0,104	0/1:19,1:21:53.70:54,0,103	0/1:9,1:10:42.79:43,0,52	0/1:22,0:22:49.56:50,0,82	0/1:22,0:21:42.24:42,0,72	1/1:15,1:16:27.73:96,28,0	0/1:27,0:26:45.51:46,0,164	0/1:25,0:24:61.93:79,0,62	0/1:17,0:16:29.32:29,0,29	1/1:3,0:3:0.33:2,0,0	0/0:13,0:13:14.02:0,14,148	0/1:20,0:20:24.79:25,0,128	0/0:9,0:9:3.57:0,4,55	0/1:12,0:12:17.32:17,0,22	1/1:12,1:13:5.16:60,5,0	1/1:7,0:7:10.33:32,10,0	0/1:11,0:11:30.53:31,0,48	0/1:14,0:14:11.63:48,0,12	0/1:27,0:25:19.05:76,0,19	1/1:10,0:10:7.86:21,8,0
chr10	61373937	.	AG	A	7855.14	PASS	AB=1.000;AC=52;AF=0.929;AN=56;BaseQRankSum=0.946;DP=470;FS=4.356;HRun=1;HaplotypeScore=175.9499;InbreedingCoeff=-0.0720;MQ=58.20;MQ0=0;MQRankSum=-2.422;QD=16.71;ReadPosRankSum=5.278;VQSLOD=5.3204;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,24:23:45.14:557,45,0	1/1:11,0:11:26.75:191,27,0	0/1:15,0:15:17.08:74,0,17	0/1:17,0:17:16.07:84,0,16	1/1:1,21:22:51.12:613,51,0	1/1:13,0:13:32.44:213,32,0	1/1:13,0:13:35.72:252,36,0	1/1:18,0:18:23.44:210,23,0	1/1:1,16:17:42.13:520,42,0	1/1:27,0:27:75.64:461,76,0	1/1:11,0:11:29.86:226,30,0	1/1:23,0:23:59.52:420,60,0	1/1:15,0:15:23.72:257,24,0	1/1:19,0:19:56.65:421,57,0	1/1:23,0:23:47.65:341,48,0	1/1:20,1:21:56.57:414,57,0	1/1:13,0:13:23.71:163,24,0	1/1:0,7:7:18.03:223,18,0	0/1:20,0:20:0.01:181,0,0	1/1:26,0:26:59.45:396,59,0	0/1:12,0:12:3.09:68,0,3	1/1:16,0:16:38.53:272,39,0	1/1:17,0:17:35.46:241,35,0	1/1:5,0:5:11.93:88,12,0	1/1:14,0:14:32.51:219,33,0	1/1:19,0:19:7.81:223,8,0	1/1:23,0:23:59.53:423,60,0	1/1:9,0:9:1.84:104,2,0
chr10	61373959	.	AG	A	4333.61	PASS	AB=0.978;AC=46;AF=0.821;AN=56;BaseQRankSum=-2.948;DP=515;FS=0.539;HRun=1;HaplotypeScore=173.0147;InbreedingCoeff=-0.2173;MQ=56.52;MQ0=0;MQRankSum=-2.765;QD=8.41;ReadPosRankSum=8.976;VQSLOD=1.5885;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:24:20.72:222,21,0	0/1:15,0:15:14.88:113,0,15	0/1:14,2:16:23.29:23,0,38	0/1:15,2:17:36.95:37,0,38	1/1:30,0:30:37.12:285,37,0	0/1:21,0:21:9.37:155,0,9	1/1:19,0:19:11.54:170,12,0	0/1:13,0:13:20.31:20,0,135	1/1:19,0:19:49.91:245,50,0	0/1:23,0:23:14.79:185,0,15	0/1:22,0:22:10.88:164,0,11	1/1:24,0:24:24.37:255,24,0	1/1:17,0:17:42.36:222,42,0	1/1:19,0:19:25.23:200,25,0	1/1:20,0:20:10.29:183,10,0	1/1:18,0:17:12.01:191,12,0	0/1:14,0:14:1.11:120,0,1	1/1:11,0:11:21.79:101,22,0	1/1:11,0:11:2.01:72,2,0	0/1:28,0:28:20.49:208,0,20	1/1:16,0:16:18.69:76,19,0	1/1:22,0:22:13.10:209,13,0	1/1:22,0:22:13.66:175,14,0	1/1:7,0:7:16.22:76,16,0	1/1:15,0:15:34.88:160,35,0	0/1:18,0:18:5.04:123,0,5	1/1:25,0:25:24.47:259,24,0	1/1:9,0:9:3.92:83,4,0
chr10	61375934	.	C	CT	1832.61	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-2.750;DP=567;FS=1.754;HRun=6;HaplotypeScore=82.5771;InbreedingCoeff=0.9997;MQ=84.90;MQ0=0;MQRankSum=-6.379;QD=29.09;ReadPosRankSum=0.375;VQSLOD=4.1344;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,13:15:39.08:463,39,0	0/0:13,0:13:36.08:0,36,367	0/0:21,0:21:50.99:0,51,482	0/0:22,0:22:47.73:0,48,461	1/1:4,14:18:42.12:510,42,0	0/0:27,0:27:72.16:0,72,735	0/0:17,0:17:42.08:0,42,421	0/0:30,0:30:81.17:0,81,821	1/1:2,17:19:54.14:658,54,0	0/0:26,0:26:72.15:0,72,728	0/0:25,0:25:72.16:0,72,735	0/0:15,0:15:36.08:0,36,367	0/0:23,0:23:63.11:0,63,633	0/0:16,0:16:45.10:0,45,459	0/0:18,0:18:51.11:0,51,520	0/0:17,0:17:45.06:0,45,449	0/0:17,0:17:48.11:0,48,489	1/1:1,10:11:30.08:362,30,0	0/0:16,0:16:42.06:0,42,419	0/0:39,0:39:99:0,114,1156	0/0:13,0:13:39.09:0,39,398	0/0:23,0:23:66.14:0,66,667	0/0:33,0:33:90.14:0,90,895	0/0:12,0:12:36.08:0,36,367	0/0:15,0:15:42.09:0,42,429	0/0:18,0:18:51.12:0,51,520	0/0:29,0:29:84.19:0,84,857	0/0:19,0:19:51.12:0,51,520
chr10	61375970	.	TA	T	1256.79	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=6.646;DP=595;FS=11.204;HRun=8;HaplotypeScore=77.4743;InbreedingCoeff=0.9969;MQ=84.71;MQ0=0;MQRankSum=-4.017;QD=19.64;ReadPosRankSum=-1.945;VQSLOD=2.2229;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,13:16:38.98:364,39,0	0/0:12,0:12:33.10:0,33,398	0/0:19,0:20:36.58:0,37,383	0/0:23,0:22:48.15:0,48,500	1/1:1,18:19:47.92:434,48,0	0/0:27,0:27:78.23:0,78,931	0/0:14,0:14:39.12:0,39,471	0/0:34,0:34:84.22:0,84,976	1/1:5,13:18:42.04:398,42,0	0/0:17,0:17:48.12:0,48,550	0/0:34,0:34:93.29:0,93,1124	0/0:18,0:18:48.15:0,48,580	0/0:19,0:19:57.16:0,57,674	0/0:18,0:18:51.14:0,51,603	0/0:23,0:23:57.16:0,57,677	0/0:14,0:15:44.99:0,45,511	0/0:25,0:25:66.19:0,66,786	1/1:2,9:11:23.98:221,24,0	0/0:17,0:17:51.15:0,51,607	0/0:44,0:44:99:0,123,1475	0/0:13,0:13:30.09:0,30,362	0/0:25,0:25:75.22:0,75,895	0/0:31,0:31:78.24:0,78,942	0/0:19,0:19:51.15:0,51,606	0/0:8,0:8:18.06:0,18,217	0/0:20,0:20:45.14:0,45,544	0/0:32,0:32:90.27:0,90,1077	0/0:23,0:22:63.63:0,64,746
chr10	61376787	.	C	CT	4119.08	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=13.965;DP=641;FS=12.013;HRun=1;HaplotypeScore=75.8550;InbreedingCoeff=0.9986;MQ=84.83;MQ0=0;MQRankSum=-2.803;QD=43.82;ReadPosRankSum=2.999;VQSLOD=2.8432;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,22:24:63.21:1006,63,0	0/0:10,0:10:30.09:0,30,404	0/0:20,0:20:54.18:0,54,748	0/0:25,0:25:75.10:0,75,958	1/1:0,35:35:96.33:1531,96,0	0/0:28,0:28:84.26:0,84,1135	0/0:30,0:30:90.29:0,90,1235	0/0:22,0:22:66.20:0,66,889	1/1:0,25:25:69.24:1103,69,0	0/0:31,0:31:87.29:0,87,1209	0/0:25,0:25:75.25:0,75,1048	0/0:14,0:14:42.14:0,42,587	0/0:23,0:23:69.23:0,69,963	0/0:18,0:18:51.15:0,51,682	0/0:23,0:23:69.23:0,69,955	0/0:16,0:16:48.15:0,48,655	0/0:30,0:30:84.28:0,84,1172	1/1:0,10:10:30.10:479,30,0	0/0:19,0:19:57.19:0,57,786	0/0:41,0:41:99:0,123,1686	0/0:13,0:13:39.12:0,39,524	0/0:30,0:30:90.29:0,90,1239	0/0:20,0:20:60.20:0,60,838	0/0:18,0:18:54.18:0,54,753	0/0:34,0:34:99:0,102,1379	0/0:25,0:25:75.24:0,75,1026	0/0:24,0:23:69.23:0,69,957	0/0:8,0:8:21.07:0,21,294
chr10	61378391	.	ACT	A	3061.30	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=9.217;DP=555;FS=0.000;HRun=0;HaplotypeScore=71.4010;InbreedingCoeff=0.9973;MQ=80.97;MQ0=1;MQRankSum=-5.628;QD=38.27;ReadPosRankSum=4.361;VQSLOD=5.2031;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,23:23:66.22:971,66,0	0/0:9,0:9:21.05:0,21,354	0/0:30,0:30:69.95:0,70,1322	0/0:29,0:28:77.89:0,78,1301	1/1:1,26:27:72.24:1060,72,0	0/0:18,0:18:48.16:0,48,887	0/0:19,0:19:48.15:0,48,868	0/0:29,0:28:87.27:0,87,1533	1/1:1,18:19:51.17:749,51,0	0/0:21,0:21:60.21:0,60,1124	0/0:14,0:14:42.14:0,42,776	0/0:18,0:18:54.17:0,54,978	0/0:18,0:18:51.17:0,51,923	0/0:24,0:24:69.24:0,69,1292	0/0:32,0:32:93.32:0,93,1700	0/0:22,0:22:66.23:0,66,1236	0/0:22,0:22:63.20:0,63,1102	1/1:0,11:11:30.10:442,30,0	0/0:18,0:17:48.16:0,48,867	0/0:22,0:22:60.19:0,60,1067	0/0:14,0:14:39.13:0,39,730	0/0:15,0:15:42.14:0,42,787	0/0:16,0:16:48.16:0,48,899	0/0:18,0:18:54.19:0,54,993	0/0:10,0:10:27.09:0,27,492	0/0:25,0:25:72.25:0,72,1342	0/0:25,0:25:75.24:0,75,1373	0/0:7,0:7:21.07:0,21,393
chr10	61378496	.	GACACACACACAT	G	1373.41	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-1.347;DP=672;FS=0.621;HRun=0;HaplotypeScore=252.8228;InbreedingCoeff=0.9855;MQ=59.04;MQ0=16;MQRankSum=-2.336;QD=18.07;ReadPosRankSum=-2.274;VQSLOD=2.2601;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:23,4:26:54.68:710,55,0	0/0:9,0:9:21.07:0,21,526	0/0:46,0:16:21.96:0,22,190	0/0:45,0:18:23.81:0,24,236	1/1:14,6:19:36.39:469,36,0	0/0:24,0:23:54.11:0,54,1172	0/0:25,0:25:51.56:0,52,947	0/0:25,0:23:57.10:0,57,891	1/1:17,4:20:23.88:265,24,0	0/0:32,0:32:84.23:0,84,1814	0/0:11,0:11:25.67:0,26,558	0/0:17,0:17:33.07:0,33,652	0/0:12,0:12:21.52:0,22,448	0/0:26,0:26:48.10:0,48,1065	0/0:25,0:24:57.11:0,57,1075	0/0:29,0:29:69.19:0,69,1565	0/0:24,0:24:54.17:0,54,1338	1/1:7,0:5:11.91:86,12,0	0/0:15,0:14:27:0,27,510	0/0:36,0:36:78.06:0,78,1606	0/0:37,0:37:74.99:0,75,1534	0/0:26,0:26:69.12:0,69,1415	0/0:19,0:19:41.74:0,42,889	0/0:31,0:31:69.10:0,69,1434	0/0:22,0:22:42.08:0,42,832	0/0:23,0:23:63.15:0,63,1299	0/0:25,0:25:52.37:0,52,1072	0/0:12,0:12:24.08:0,24,593
chr10	61378504	.	CACAT	C	5060.97	PASS	AB=0.984;AC=29;AF=0.518;AN=56;BaseQRankSum=15.045;DP=660;FS=0.375;HRun=0;HaplotypeScore=143.9914;InbreedingCoeff=-0.5048;MQ=57.14;MQ0=17;MQRankSum=0.889;QD=9.22;ReadPosRankSum=9.372;VQSLOD=2.4951;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:26:30.34:256,30,0	0/1:9,1:10:47.16:122,0,47	0/0:42,0:14:21.98:0,22,196	0/0:41,0:13:23.53:0,24,184	1/1:16,0:15:16.97:164,17,0	0/1:27,0:26:83.99:263,0,84	0/1:27,1:28:99:212,0,144	0/0:28,0:26:30.04:0,30,577	1/1:17,0:15:11.80:83,12,0	0/1:32,0:32:99:323,0,195	0/1:15,0:15:46.10:123,0,46	0/1:16,0:16:47.46:110,0,47	0/1:11,0:11:29.06:146,0,29	0/1:23,0:23:49.98:279,0,50	0/1:24,0:23:99:193,0,178	0/1:30,0:30:99:296,0,104	0/1:20,2:22:11.97:385,0,12	1/1:8,0:6:13.94:92,14,0	0/1:11,0:10:76.50:76,0,81	0/1:35,0:35:99:283,0,191	0/1:35,0:34:99:209,0,233	0/1:27,0:27:99:275,0,146	0/1:19,1:20:99:157,0,104	0/1:30,1:31:99:309,0,125	0/1:21,0:21:99:151,0,109	0/1:24,0:23:99:163,0,194	0/1:23,1:24:94.04:245,0,94	0/1:14,0:14:14.95:145,0,15
chr10	61378508	.	TACAC	T	10207.43	PASS	AB=0.632;AC=41;AF=0.732;AN=56;BaseQRankSum=-5.145;DP=663;FS=17.835;HRun=0;HaplotypeScore=129.9864;InbreedingCoeff=0.7649;MQ=54.97;MQ0=22;MQRankSum=5.265;QD=21.49;ReadPosRankSum=7.494;VQSLOD=3.0700;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:30:22.42:0,22,131	1/1:5,5:10:12.51:190,13,0	0/0:43,0:11:3.01:0,3,52	0/0:40,0:10:2.22:0,2,7	0/0:18,0:17:20.03:0,20,126	1/1:7,17:24:36.04:552,36,0	1/1:12,15:28:28.58:409,29,0	0/0:31,0:29:23.29:0,23,268	0/0:14,0:12:14.69:0,15,92	1/1:10,18:29:49.26:880,49,0	1/1:5,12:17:21.75:307,22,0	1/1:4,12:17:23.06:296,23,0	1/1:2,8:10:14.59:242,15,0	1/1:5,18:23:36.12:583,36,0	0/1:10,12:23:19.08:412,0,19	1/1:6,18:29:38.52:682,39,0	1/1:6,16:22:45.15:720,45,0	0/0:9,0:7:2.73:0,3,21	1/1:7,4:10:16.98:244,17,0	1/1:15,20:34:33.02:669,33,0	1/1:18,17:34:36.11:560,36,0	1/1:14,14:29:51.15:761,51,0	1/1:9,11:20:24.08:389,24,0	1/1:13,16:30:43.87:650,44,0	1/1:7,11:19:24.08:389,24,0	1/1:12,12:23:37.90:489,38,0	1/1:11,15:26:4.01:493,4,0	1/1:2,9:11:18.06:292,18,0
chr10	61378598	.	C	CAA	3819.50	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-3.307;DP=659;FS=1.733;HRun=8;HaplotypeScore=82.6179;InbreedingCoeff=0.9959;MQ=82.17;MQ0=0;MQRankSum=-1.996;QD=30.80;ReadPosRankSum=-1.374;VQSLOD=3.6320;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,24:27:68.72:1037,69,0	0/0:9,0:9:24.04:0,24,256	0/0:18,0:18:23.84:0,24,333	0/0:26,0:25:32.34:0,32,479	1/1:2,30:33:86.63:1223,87,0	0/0:25,0:25:62.88:0,63,681	0/0:17,0:17:45.12:0,45,502	1/1:3,0:27:58.89:236,59,0	1/1:4,24:29:65.70:990,66,0	0/0:31,0:31:78.18:0,78,869	0/0:27,0:27:63.16:0,63,702	0/0:23,0:23:60.14:0,60,660	0/0:20,0:20:54.14:0,54,602	0/0:23,0:23:66.15:0,66,726	0/0:27,0:27:72.19:0,72,803	0/0:22,0:22:63.15:0,63,690	0/0:22,0:22:66.18:0,66,735	1/1:0,7:7:21.07:333,21,0	0/0:11,0:12:17.96:0,18,257	0/0:37,0:39:78.04:0,78,983	0/0:29,0:29:81.22:0,81,903	0/0:23,0:23:63.17:0,63,702	0/0:28,0:28:75.19:0,75,836	0/0:19,0:19:48.12:0,48,535	0/0:20,0:20:60.16:0,60,669	0/0:34,0:34:90.22:0,90,995	0/0:27,0:27:75.19:0,75,826	0/0:12,0:12:27.07:0,27,301
chr10	61380615	.	A	AT	5055.19	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-14.016;DP=606;FS=2.063;HRun=7;HaplotypeScore=55.7487;InbreedingCoeff=0.9961;MQ=69.90;MQ0=1;MQRankSum=-1.898;QD=29.74;ReadPosRankSum=0.195;VQSLOD=5.2403;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,25:25:63.19:761,63,0	0/0:13,0:13:36.06:0,36,348	0/0:27,1:22:23.74:0,24,285	0/0:17,1:12:25.70:0,26,237	1/1:3,23:26:60.18:725,60,0	1/1:1,16:17:45.14:544,45,0	1/1:1,14:16:38.35:469,38,0	0/0:26,0:26:66.09:0,66,633	1/1:1,17:18:51.16:616,51,0	0/0:38,0:38:99:0,105,1014	0/0:27,0:27:72.11:0,72,695	0/0:16,0:16:36.05:0,36,348	0/0:24,0:24:63.09:0,63,603	0/0:18,0:18:51.08:0,51,492	0/0:22,0:22:57.08:0,57,550	0/0:12,0:12:36.06:0,36,348	0/0:29,0:29:81.07:0,81,765	1/1:2,8:10:15.05:181,15,0	0/0:14,0:14:30.04:0,30,290	0/0:39,0:39:99:0,108,1031	0/0:7,0:7:21.02:0,21,197	1/1:0,14:14:42.09:491,42,0	1/1:3,22:25:60.18:725,60,0	1/1:2,17:19:45.14:543,45,0	0/0:29,0:29:84.14:0,84,811	0/0:19,0:19:48.07:0,48,463	0/0:37,0:37:99:0,99,956	0/0:20,0:20:54.09:0,54,520
chr10	61381061	.	A	AT	2362.67	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=7.237;DP=576;FS=4.311;HRun=7;HaplotypeScore=58.2197;InbreedingCoeff=0.8843;MQ=62.98;MQ0=3;MQRankSum=-0.048;QD=21.10;ReadPosRankSum=-0.386;VQSLOD=2.9788;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,30:37:75.23:906,75,0	0/0:9,0:9:24.04:0,24,232	0/1:18,0:12:6.45:6,0,120	0/0:9,0:5:14.23:0,14,120	1/1:6,11:17:30.05:346,30,0	0/0:21,0:21:54.08:0,54,521	0/0:14,0:14:36.06:0,36,347	0/0:30,0:29:78.12:0,78,753	1/1:0,17:17:51.16:616,51,0	0/0:31,0:31:84.13:0,84,811	0/0:25,0:25:69.11:0,69,666	0/0:23,0:23:63.10:0,63,608	0/0:20,0:20:48.07:0,48,464	0/0:15,0:15:42.07:0,42,406	0/0:23,0:23:69.10:0,69,661	0/0:15,0:15:45.05:0,45,424	0/0:24,0:24:69.11:0,69,666	1/1:4,19:23:54.17:651,54,0	0/0:18,0:18:48.08:0,48,463	0/0:34,0:34:90.11:0,90,857	0/0:12,0:12:27.03:0,27,261	0/0:16,0:16:45.05:0,45,424	0/0:20,0:20:54.08:0,54,521	0/0:18,0:18:45.07:0,45,434	0/0:26,0:26:48.02:0,48,450	0/0:26,0:26:72.12:0,72,695	0/0:26,0:26:72.11:0,72,695	0/0:9,0:9:24.04:0,24,232
chr10	61381956	.	T	TGG	2943.64	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=6.421;DP=670;FS=2.098;HRun=7;HaplotypeScore=103.9270;InbreedingCoeff=0.9930;MQ=63.84;MQ0=0;MQRankSum=-2.831;QD=33.83;ReadPosRankSum=1.857;VQSLOD=3.3886;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,21:26:65.67:1010,66,0	0/0:13,0:13:33.08:0,33,372	0/0:11,0:11:24.04:0,24,261	0/0:18,0:17:13.97:0,14,327	1/1:3,12:16:32.98:518,33,0	0/0:20,0:20:54.16:0,54,629	0/0:27,0:27:69.17:0,69,792	0/0:27,0:27:54.14:0,54,629	1/1:5,25:31:80.72:1256,81,0	0/0:16,0:16:42.10:0,42,472	0/0:21,0:21:51.14:0,51,594	0/0:31,0:31:87.24:0,87,1003	0/0:33,0:33:65.56:0,66,978	0/0:17,0:17:45.13:0,45,524	0/0:34,0:34:99:0,99,1143	0/0:17,0:17:42.12:0,42,489	0/0:42,0:42:99:0,108,1247	1/1:1,1:14:33.05:320,33,0	0/0:19,0:19:51.13:0,51,582	0/0:33,0:33:87.24:0,87,1013	0/0:49,0:49:99:0,126,1452	0/0:25,0:25:72.21:0,72,839	0/0:31,0:31:87.24:0,87,1002	0/0:19,0:19:45.06:0,45,497	0/0:21,0:21:54.11:0,54,614	0/0:20,0:20:48.13:0,48,558	0/0:29,0:29:84.25:0,84,979	0/0:10,0:10:24.06:0,24,279
chr10	61383234	.	G	GTTGT	22874.06	PASS	AB=0.667;AC=51;AF=0.911;AN=56;BaseQRankSum=-6.187;DP=653;FS=0.000;HRun=0;HaplotypeScore=97.9077;InbreedingCoeff=0.6767;MQ=77.17;MQ0=5;MQRankSum=-1.695;QD=38.84;ReadPosRankSum=4.170;VQSLOD=4.7829;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:15,14:29:50.91:1231,51,0	1/1:2,3:5:12.04:273,12,0	0/0:36,0:28:10.14:0,10,403	0/0:28,0:26:18:0,18,253	1/1:11,20:32:51.17:1164,51,0	1/1:2,18:22:48.16:1140,48,0	1/1:4,12:17:24.08:564,24,0	1/1:45,0:43:35.84:382,36,0	1/1:4,22:27:45.15:1092,45,0	1/1:12,20:33:67.47:1559,67,0	1/1:9,15:27:48.04:983,48,0	1/1:6,14:20:36.12:856,36,0	1/1:5,18:22:51.65:1236,52,0	1/1:1,18:20:48.16:1165,48,0	1/1:4,12:17:30.10:729,30,0	1/1:8,17:21:39.13:911,39,0	1/1:7,16:23:17.60:992,18,0	1/1:9,9:18:2.44:279,2,0	0/1:9,7:17:18.69:530,0,19	1/1:9,30:40:44.55:2051,45,0	1/1:13,16:29:45.15:1046,45,0	1/1:5,5:11:18.06:414,18,0	1/1:4,12:17:24.08:559,24,0	1/1:3,8:11:24.08:583,24,0	1/1:7,14:22:36.12:874,36,0	1/1:7,14:21:45.14:951,45,0	1/1:6,12:18:21.07:510,21,0	1/1:4,14:16:33.11:801,33,0
chr10	61385606	.	TC	T	637.58	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.116;DP=614;FS=2.960;HRun=4;HaplotypeScore=57.3060;InbreedingCoeff=0.9899;MQ=80.36;MQ0=0;MQRankSum=-1.388;QD=24.52;ReadPosRankSum=-2.664;VQSLOD=1.9483;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:90.30:0,90,1259	0/0:8,0:8:24.08:0,24,336	0/0:17,0:17:48.16:0,48,659	0/0:20,0:20:51.16:0,51,688	0/0:31,0:31:90.29:0,90,1244	0/0:21,0:21:63.21:0,63,882	0/0:14,0:14:39.12:0,39,527	1/1:5,21:26:63.16:732,63,0	0/0:22,0:22:63.21:0,63,881	0/0:30,0:30:84.28:0,84,1172	0/0:24,0:24:72.13:0,72,932	0/0:27,0:27:81.22:0,81,1093	0/0:33,0:33:99:0,99,1313	0/0:20,0:20:57.19:0,57,798	0/0:33,0:33:96.30:0,96,1309	0/0:21,0:21:63.21:0,63,874	0/0:14,0:14:42.14:0,42,588	0/0:16,0:16:48.14:0,48,651	0/0:16,0:16:42.14:0,42,588	0/0:24,0:24:72.24:0,72,1008	0/0:19,0:19:54.18:0,54,756	0/0:20,0:20:57.19:0,57,797	0/0:21,0:21:63.20:0,63,865	0/0:13,0:13:39.13:0,39,546	0/0:24,0:24:72.22:0,72,989	0/0:23,0:23:66.21:0,66,900	0/0:38,0:38:99:0,114,1576	0/0:8,0:8:18.06:0,18,252
chr10	61387803	.	ACT	A	1294.18	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=8.043;DP=726;FS=0.000;HRun=0;HaplotypeScore=79.8018;InbreedingCoeff=0.9993;MQ=82.67;MQ0=0;MQRankSum=-2.449;QD=38.06;ReadPosRankSum=-4.828;VQSLOD=3.8307;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:57.17:0,57,1006	0/0:16,0:16:42.13:0,42,734	0/0:21,0:21:57.11:0,57,962	0/0:19,0:19:51.17:0,51,923	0/0:33,0:33:96.28:0,96,1668	0/0:32,0:32:96.30:0,96,1697	0/0:13,0:13:36.12:0,36,647	1/1:0,34:34:99:1389,102,0	0/0:22,0:22:63.22:0,63,1138	0/0:27,0:26:75.26:0,75,1366	0/0:39,0:39:99:0,114,2023	0/0:26,0:26:78.25:0,78,1399	0/0:30,0:30:90.27:0,90,1552	0/0:21,0:21:63.19:0,63,1087	0/0:43,0:43:99:0,129,2304	0/0:28,0:27:78.25:0,78,1387	0/0:20,0:20:54.17:0,54,958	0/0:12,0:12:30.10:0,30,549	0/0:17,0:17:45.13:0,45,742	0/0:32,0:32:96.32:0,96,1728	0/0:33,0:33:96.32:0,96,1717	0/0:29,0:29:87.26:0,87,1496	0/0:26,0:26:72.22:0,72,1251	0/0:23,0:23:63.18:0,63,1092	0/0:27,0:27:75.26:0,75,1374	0/0:24,0:24:69.24:0,69,1265	0/0:35,0:35:99:0,105,1882	0/0:21,0:21:63.22:0,63,1154
chr10	61388821	.	TACACACAC	T	1115.87	PASS	AC=8;AF=0.154;AN=52;BaseQRankSum=1.178;DP=419;FS=2.160;HRun=0;HaplotypeScore=119.1708;InbreedingCoeff=0.6179;MQ=71.90;MQ0=6;MQRankSum=-3.720;QD=19.93;ReadPosRankSum=2.391;VQSLOD=3.1837;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:21.94:0,22,454	./.	0/0:31,0:25:3.01:0,3,42	0/0:19,0:14:9.03:0,9,174	0/0:23,0:22:17.19:0,17,311	1/1:7,8:15:15.05:374,15,0	1/1:5,10:16:18.06:396,18,0	0/0:22,0:22:15.05:0,15,397	0/0:7,0:18:15.04:0,15,428	0/0:10,0:10:27.09:0,27,951	0/0:8,0:11:6.02:0,6,148	0/0:8,0:8:3.01:0,3,50	0/0:10,0:10:15.05:0,15,490	0/0:9,0:14:6.02:0,6,154	0/0:9,0:18:5.89:0,6,166	0/0:15,0:15:12.04:0,12,366	0/0:11,0:10:11.99:0,12,248	0/0:6,0:6:9.92:0,10,182	0/0:7,0:9:9.02:0,9,231	./.	0/0:16,0:12:8.87:0,9,330	1/1:2,11:13:0.86:334,1,0	1/1:6,6:12:6.02:145,6,0	0/0:5,10:15:0:0,0,0	0/0:27,0:26:20.98:0,21,664	0/0:12,0:11:27.09:0,27,889	0/0:18,0:16:24.07:0,24,755	0/0:3,0:5:6.02:0,6,143
chr10	61388860	.	ACT	A	2859.75	PASS	AB=1.000;AC=36;AF=0.643;AN=56;BaseQRankSum=-4.542;DP=458;FS=3.725;HRun=0;HaplotypeScore=95.7587;InbreedingCoeff=0.6054;MQ=60.25;MQ0=12;MQRankSum=-0.182;QD=9.63;ReadPosRankSum=0.452;VQSLOD=3.1192;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:25,3:28:36.32:403,36,0	1/1:5,0:5:8.96:70,9,0	0/0:31,0:20:59.63:0,60,596	0/0:33,0:18:50.22:0,50,475	1/1:5,14:18:9.03:125,9,0	0/0:18,0:18:33.53:0,34,266	0/0:17,0:17:23.47:0,23,158	0/0:18,0:17:29.10:0,29,309	0/1:20,0:20:3.03:118,0,3	1/1:18,0:18:8.09:195,8,0	0/1:5,0:5:5.58:39,0,6	1/1:8,0:8:14.63:124,15,0	1/1:15,0:15:6.01:207,6,0	1/1:8,0:8:6.14:92,6,0	1/1:13,0:13:9.46:76,9,0	1/1:18,0:18:10.22:129,10,0	0/1:10,0:9:3.47:70,0,3	1/1:10,0:10:19.61:154,20,0	1/1:11,0:10:7.88:100,8,0	1/1:22,0:22:47.79:380,48,0	1/1:14,0:11:2.18:83,2,0	0/0:17,0:17:22.28:0,22,153	0/0:13,0:13:17.58:0,18,148	0/0:14,0:14:5.99:0,6,48	0/1:28,0:27:7.69:166,0,8	1/1:23,0:22:40.79:349,41,0	1/1:17,0:15:6.05:108,6,0	1/1:5,0:5:5.52:66,6,0
chr10	61389716	.	TGA	T	547.99	PASS	AB=0.898;AC=22;AF=0.524;AN=42;BaseQRankSum=3.303;DP=404;FS=16.305;HRun=0;HaplotypeScore=60.7069;InbreedingCoeff=0.4985;MQ=65.46;MQ0=10;MQRankSum=0.424;QD=3.11;ReadPosRankSum=1.083;VQSLOD=0.4432;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:0:0,0,0	./.	./.	./.	1/1:18,0:19:6:52,6,0	0/0:18,0:18:3.01:0,3,38	0/0:10,0:10:8.94:0,9,83	./.	1/1:11,0:11:7.62:39,8,0	1/1:23,6:29:15.51:160,16,0	./.	1/1:12,0:12:3:28,3,0	1/1:13,0:13:2.98:21,3,0	1/1:5,1:8:8.52:69,9,0	1/1:14,3:18:11.86:110,12,0	1/1:3,6:9:11.86:110,12,0	1/1:14,3:18:4.57:70,5,0	1/1:9,0:9:2.84:14,3,0	0/1:18,0:19:16.79:17,0,38	0/0:19,0:19:12.04:0,12,173	0/0:7,0:7:3.01:0,3,43	./.	./.	0/0:7,0:5:2.98:0,3,21	0/1:9,0:11:8.71:9,0,12	0/0:19,0:19:21.78:0,22,217	0/0:17,0:17:21.04:0,21,262	0/0:9,0:9:15.49:0,15,167
chr10	61389780	.	AC	A	346.55	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.686;DP=418;FS=7.320;HRun=1;HaplotypeScore=58.8587;InbreedingCoeff=0.8825;MQ=78.10;MQ0=2;MQRankSum=-5.938;QD=13.86;ReadPosRankSum=-2.635;VQSLOD=1.5392;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:42.14:0,42,661	0/0:4,0:4:12.04:0,12,192	0/0:20,0:12:8.57:0,9,424	0/0:35,0:22:35.29:0,35,621	0/0:20,0:20:60.20:0,60,959	0/0:18,0:18:54.18:0,54,863	0/0:9,0:8:24.08:0,24,383	1/1:4,21:25:23.27:440,23,0	0/0:8,0:8:24.08:0,24,383	0/0:14,0:14:42.14:0,42,672	0/0:16,0:16:48.16:0,48,759	0/0:13,0:13:36.11:0,36,551	0/0:7,0:7:18.06:0,18,287	0/0:11,0:11:30.10:0,30,479	0/0:9,0:9:27.06:0,27,384	0/0:15,0:15:39.13:0,39,623	0/0:12,0:12:33.10:0,33,504	0/0:6,0:6:14.99:0,15,187	0/0:18,0:18:54.18:0,54,842	0/0:20,0:20:60.18:0,60,933	0/0:8,0:8:21.05:0,21,309	0/0:11,0:11:30.10:0,30,479	0/0:12,0:12:36.11:0,36,552	0/0:12,0:12:36.07:0,36,524	0/0:18,0:18:51.17:0,51,802	0/0:23,0:23:69.24:0,69,1103	0/0:15,0:15:42.13:0,42,648	0/0:23,0:23:69.24:0,69,1100
chr10	61389782	.	TTGC	T	578.76	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=7.374;DP=414;FS=13.877;HRun=0;HaplotypeScore=72.0433;InbreedingCoeff=0.7309;MQ=80.39;MQ0=2;MQRankSum=-6.275;QD=9.49;ReadPosRankSum=-2.105;VQSLOD=1.4103;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:42.14:0,42,975	0/0:5,0:5:15.05:0,15,354	0/0:19,0:12:33.10:0,33,700	0/1:35,0:24:1.45:1,0,846	0/0:20,0:20:60.21:0,60,1397	0/0:18,0:18:54.19:0,54,1277	0/0:9,0:8:24.08:0,24,567	1/1:4,21:25:23.76:672,24,0	0/0:8,0:8:24.08:0,24,557	0/0:14,0:14:42.14:0,42,939	0/0:16,0:16:48.16:0,48,1135	0/0:11,0:11:33.11:0,33,780	0/0:6,0:6:18.06:0,18,426	0/0:11,0:11:33.11:0,33,767	0/0:7,0:7:21.07:0,21,497	0/0:15,0:15:39.13:0,39,920	0/0:12,0:12:33.11:0,33,779	0/0:7,0:7:15.05:0,15,328	0/0:19,0:19:54.15:0,54,1208	0/0:20,0:20:60.21:0,60,1407	0/0:9,0:9:24.08:0,24,564	0/0:10,0:10:30.10:0,30,709	0/0:12,0:12:36.12:0,36,851	0/0:12,0:12:36.12:0,36,849	0/0:17,0:17:48.14:0,48,1086	0/0:23,0:23:69.24:0,69,1631	0/0:15,0:15:45.15:0,45,1061	0/0:23,0:23:69.24:0,69,1631
chr10	61389833	.	G	GA	1823.21	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-8.741;DP=462;FS=2.506;HRun=7;HaplotypeScore=46.3748;InbreedingCoeff=0.9927;MQ=79.19;MQ0=1;MQRankSum=-2.558;QD=29.89;ReadPosRankSum=1.314;VQSLOD=4.0602;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,12:14:33.10:398,33,0	0/0:7,0:7:18.03:0,18,174	0/0:15,0:15:23.99:0,24,219	0/0:12,0:11:21.02:0,21,197	1/1:1,22:23:66.20:797,66,0	0/0:17,0:17:48.08:0,48,464	0/0:13,0:13:33.04:0,33,313	0/0:35,0:34:87.11:0,87,833	1/1:1,15:16:45.13:534,45,0	0/0:20,0:20:60.10:0,60,579	0/0:28,0:28:81.13:0,81,782	0/0:16,0:16:48.08:0,48,464	0/0:12,0:12:36.06:0,36,348	0/0:15,0:15:33.02:0,33,313	0/0:13,0:13:36.04:0,36,343	0/0:9,0:9:24.04:0,24,232	0/0:14,0:14:36.06:0,36,348	1/1:1,7:8:21.06:254,21,0	0/0:14,0:14:33.05:0,33,319	0/0:21,0:21:57.09:0,57,550	0/0:10,0:10:23.93:0,24,209	0/0:11,0:11:24.03:0,24,232	0/0:14,0:14:36.02:0,36,339	0/0:11,0:11:33.05:0,33,319	0/0:19,0:19:51.04:0,51,479	0/0:26,0:26:66.10:0,66,637	0/0:19,0:19:54.07:0,54,516	0/0:30,0:30:90.12:0,90,862
chr10	61390382	.	CT	C	571.10	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.793;DP=449;FS=0.000;HRun=8;HaplotypeScore=42.4847;InbreedingCoeff=0.9237;MQ=67.32;MQ0=1;MQRankSum=1.956;QD=21.97;ReadPosRankSum=-3.789;VQSLOD=1.8600;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:27.08:0,27,326	0/0:8,0:8:24.07:0,24,289	0/0:14,0:14:11.81:0,12,270	0/0:8,0:7:15:0,15,153	0/0:25,0:25:69.19:0,69,813	0/0:20,0:20:57.17:0,57,688	0/0:11,0:11:27.07:0,27,313	1/1:3,23:26:69.11:666,69,0	0/0:9,0:9:27.07:0,27,314	0/0:16,0:16:48.14:0,48,571	0/0:24,0:24:69.20:0,69,822	0/0:13,0:13:36.11:0,36,435	0/0:20,0:20:54.13:0,54,628	0/0:22,0:22:54.15:0,54,641	0/0:23,0:23:57.17:0,57,689	0/0:11,0:11:30.08:0,30,350	0/0:8,0:8:21.06:0,21,254	0/0:7,0:7:18.01:0,18,201	0/0:22,0:21:57.13:0,57,653	0/0:21,0:21:60.18:0,60,725	0/0:16,0:16:42.13:0,42,507	0/0:5,0:5:15.05:0,15,181	0/0:16,0:16:45.14:0,45,543	0/0:12,0:12:33.10:0,33,398	0/0:13,0:13:39.12:0,39,471	0/0:24,0:24:34.49:0,34,696	0/0:31,0:31:90.25:0,90,1065	0/0:13,0:13:39.09:0,39,456
chr10	61391899	.	T	TA	1179.76	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=3.845;DP=471;FS=0.000;HRun=1;HaplotypeScore=50.8857;InbreedingCoeff=0.6369;MQ=75.59;MQ0=0;MQRankSum=-5.006;QD=31.05;ReadPosRankSum=-4.670;VQSLOD=1.9688;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:42.09:0,42,503	0/0:8,0:8:24.08:0,24,311	0/0:11,0:11:30.02:0,30,353	0/1:8,0:8:14.02:14,0,129	0/0:27,0:27:75.24:0,75,971	0/0:19,0:19:57.19:0,57,740	0/0:9,0:9:24.08:0,24,312	1/1:4,26:30:87.29:1270,87,0	0/0:11,0:11:33.11:0,33,428	0/0:23,0:23:69.22:0,69,896	0/0:18,0:18:51.17:0,51,662	0/0:7,0:7:18.06:0,18,234	0/0:15,0:15:45.15:0,45,583	0/0:15,0:15:45.11:0,45,543	0/0:19,0:19:57.17:0,57,725	0/0:13,0:13:39.13:0,39,506	0/0:14,0:14:42.12:0,42,530	0/0:5,0:5:12.03:0,12,145	0/0:18,0:18:48.16:0,48,623	0/0:23,0:23:69.22:0,69,884	0/0:22,0:22:66.20:0,66,841	0/0:15,0:15:45.15:0,45,583	0/0:21,0:21:63.20:0,63,817	0/0:20,0:20:60.20:0,60,779	0/0:22,0:22:66.21:0,66,856	0/0:24,0:24:69.22:0,69,895	0/0:18,0:18:54.18:0,54,700	0/0:19,0:19:57.17:0,57,715
chr10	61391906	.	AT	A	657.04	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.957;DP=453;FS=0.821;HRun=8;HaplotypeScore=50.5658;InbreedingCoeff=0.9099;MQ=74.44;MQ0=0;MQRankSum=-6.555;QD=19.32;ReadPosRankSum=-4.650;VQSLOD=2.0743;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:36.11:0,36,435	0/0:8,0:8:24.07:0,24,290	0/0:10,0:10:17.98:0,18,180	0/0:9,0:9:17.25:0,17,141	0/0:24,0:24:60.18:0,60,724	0/0:17,0:17:45.14:0,45,544	0/0:9,0:9:24.07:0,24,290	1/1:7,27:34:78.12:752,78,0	0/0:11,0:11:30.09:0,30,362	0/0:25,0:25:69.19:0,69,813	0/0:18,0:18:48.13:0,48,568	0/0:7,0:7:15.03:0,15,170	0/0:15,0:15:39.12:0,39,471	0/0:9,0:9:24.07:0,24,290	0/0:15,0:15:45.13:0,45,538	0/0:14,0:14:36.10:0,36,424	0/0:14,0:14:39.12:0,39,471	0/0:4,0:4:9.03:0,9,108	0/0:17,0:17:45.14:0,45,540	0/0:22,0:22:57.17:0,57,680	0/0:20,0:20:51.16:0,51,616	0/0:15,0:15:36.11:0,36,434	0/0:21,0:21:60.18:0,60,724	0/0:20,0:20:57.15:0,57,664	0/0:20,0:20:57.17:0,57,688	0/0:23,0:23:54.17:0,54,652	0/0:20,0:20:54.13:0,54,614	0/0:19,0:19:54.17:0,54,652
chr10	61392017	.	CT	C	309.02	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.197;DP=329;FS=7.195;HRun=1;HaplotypeScore=41.8046;InbreedingCoeff=0.7923;MQ=81.37;MQ0=0;MQRankSum=-0.185;QD=28.09;ReadPosRankSum=-3.675;VQSLOD=1.8152;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:36.12:0,36,573	0/0:6,0:6:18.06:0,18,280	0/0:11,0:11:27.46:0,27,401	0/0:10,0:10:21.05:0,21,319	0/0:18,0:18:48.16:0,48,765	0/0:18,0:18:48.16:0,48,767	0/0:6,0:6:18.06:0,18,287	1/1:0,11:11:30.09:403,30,0	0/0:9,0:9:27.09:0,27,431	0/0:10,0:10:30.10:0,30,480	0/0:22,0:22:66.23:0,66,1055	0/0:11,0:11:30.10:0,30,477	0/0:12,0:12:36.12:0,36,575	0/0:8,0:8:24.08:0,24,383	0/0:13,0:13:39.13:0,39,621	0/0:5,0:5:15.05:0,15,240	0/0:23,0:23:69.24:0,69,1102	0/0:7,0:7:21.07:0,21,335	0/0:11,0:11:33.11:0,33,528	0/0:23,0:23:69.23:0,69,1094	0/0:2,0:2:6.02:0,6,96	0/0:10,0:10:30.10:0,30,480	0/0:11,0:11:33.10:0,33,503	0/0:2,0:2:6:0,6,72	0/0:18,0:18:54.18:0,54,864	0/0:11,0:11:33.06:0,33,477	0/0:20,0:20:60.20:0,60,955	0/0:8,0:8:24.08:0,24,374
chr10	61392076	.	GAATA	G	4058.66	PASS	AC=46;AF=0.885;AN=52;BaseQRankSum=-2.608;DP=205;FS=1.411;HRun=0;HaplotypeScore=43.4396;InbreedingCoeff=0.3834;MQ=54.52;MQ0=0;MQRankSum=0.579;QD=22.42;ReadPosRankSum=4.114;VQSLOD=3.2191;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,0:8:8.94:96,9,0	1/1:0,3:3:9.03:146,9,0	0/0:3,0:2:0:0,0,0	0/0:5,0:3:3.01:0,3,30	1/1:8,0:19:26.95:241,27,0	1/1:10,7:17:33.11:534,33,0	1/1:0,1:1:3.01:49,3,0	0/0:14,0:12:20.99:0,21,203	1/1:3,0:4:5.68:39,6,0	1/1:3,2:5:9.03:146,9,0	1/1:10,2:12:12.02:170,12,0	1/1:1,2:3:3.01:49,3,0	1/1:3,2:5:9.02:123,9,0	1/1:2,0:2:3.01:49,3,0	1/1:5,2:7:6.02:98,6,0	1/1:2,1:3:3.01:49,3,0	1/1:5,14:19:39.13:634,39,0	1/1:4,0:7:2.94:24,3,0	1/1:6,3:9:9:120,9,0	1/1:5,2:7:6.02:98,6,0	1/1:1,0:1:2.94:18,3,0	./.	1/1:3,0:3:3.01:49,3,0	./.	1/1:7,7:14:24.01:359,24,0	1/1:3,7:10:24.08:390,24,0	1/1:8,3:11:12.03:171,12,0	1/1:5,6:11:27.04:408,27,0
chr10	61392146	.	GGGAAGGAA	G	11527.16	PASS	AC=50;AF=0.926;AN=54;BaseQRankSum=2.420;DP=333;FS=12.227;HRun=0;HaplotypeScore=109.0496;InbreedingCoeff=0.4296;MQ=46.67;MQ0=4;MQRankSum=-2.214;QD=37.55;ReadPosRankSum=1.979;VQSLOD=4.0201;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,0:11:3.01:56,3,0	1/1:0,4:4:9.03:228,9,0	0/0:12,0:6:3.01:0,3,96	0/0:8,0:6:3.01:0,3,124	1/1:9,0:29:39.37:649,39,0	1/1:6,12:18:27.09:685,27,0	1/1:2,5:7:9.03:228,9,0	1/1:18,0:22:2.49:7,2,0	1/1:3,0:5:3.01:56,3,0	1/1:5,13:18:39.12:938,39,0	1/1:4,14:17:36.04:750,36,0	1/1:1,1:2:3.01:76,3,0	1/1:1,10:11:30.10:761,30,0	1/1:0,8:8:24.08:609,24,0	1/1:1,6:7:15.05:380,15,0	1/1:0,4:4:9.03:228,9,0	1/1:13,4:17:11.99:304,12,0	1/1:4,0:5:3.01:39,3,0	1/1:7,5:10:15.04:331,15,0	1/1:2,8:10:24.01:551,24,0	./.	1/1:0,8:8:21.07:533,21,0	1/1:2,8:10:24.08:609,24,0	1/1:2,5:7:6.02:112,6,0	1/1:6,9:15:21.07:533,21,0	1/1:5,12:17:39.13:963,39,0	1/1:6,16:22:39.13:989,39,0	1/1:8,12:20:36.12:913,36,0
chr10	61392382	.	G	GTT	623.46	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-2.393;DP=448;FS=3.608;HRun=7;HaplotypeScore=59.4301;InbreedingCoeff=0.9746;MQ=74.78;MQ0=0;MQRankSum=-0.557;QD=32.81;ReadPosRankSum=-3.166;VQSLOD=3.0186;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:31.37:0,31,368	0/0:5,0:5:15.04:0,15,175	0/0:15,0:15:31.43:0,31,321	0/0:14,0:14:35.44:0,35,383	0/0:17,0:17:42.11:0,42,478	0/0:23,0:23:54.10:0,54,613	0/0:13,0:13:36.10:0,36,419	1/1:3,15:19:45.15:718,45,0	0/0:16,0:16:48.13:0,48,549	0/0:29,0:29:84.24:0,84,972	0/0:10,0:10:27.07:0,27,315	0/0:9,0:9:24.07:0,24,278	0/0:20,0:20:60.12:0,60,672	0/0:15,0:15:39.08:0,39,432	0/0:15,0:15:39.08:0,39,433	0/0:17,0:17:42.09:0,42,479	0/0:12,0:13:32.76:0,33,361	0/0:8,0:8:21.06:0,21,245	0/0:23,0:23:66.16:0,66,740	0/0:14,0:14:30.06:0,30,339	0/0:10,0:10:30.07:0,30,338	0/0:19,0:19:54.15:0,54,629	0/0:17,0:17:42.12:0,42,489	0/0:11,0:11:30.09:0,30,349	0/0:16,0:16:48.14:0,48,559	0/0:24,0:24:63.16:0,63,723	0/0:28,0:28:84.23:0,84,967	0/0:16,0:16:36.09:0,36,419
chr10	61392431	.	GGTAAA	G	607.17	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.339;DP=533;FS=5.884;HRun=0;HaplotypeScore=97.3780;InbreedingCoeff=0.9817;MQ=84.72;MQ0=0;MQRankSum=-3.136;QD=55.20;ReadPosRankSum=-2.674;VQSLOD=3.0155;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:48.16:0,48,1513	0/0:9,0:9:27.09:0,27,856	0/0:23,0:22:38.74:0,39,1581	0/0:14,0:14:42.14:0,42,1190	0/0:27,0:27:75.24:0,75,2187	0/0:22,0:22:66.23:0,66,2006	0/0:11,0:11:33.11:0,33,989	1/1:0,11:11:33.11:702,33,0	0/0:23,0:23:66.23:0,66,2085	0/0:27,0:27:78.27:0,78,2454	0/0:23,0:23:69.24:0,69,2148	0/0:11,0:11:33.11:0,33,1038	0/0:24,0:24:69.24:0,69,2153	0/0:13,0:13:33.11:0,33,1029	0/0:18,0:18:54.19:0,54,1705	0/0:19,0:19:57.20:0,57,1786	0/0:12,0:12:33.11:0,33,1037	0/0:5,0:5:15.05:0,15,462	0/0:23,0:23:66.23:0,66,2058	0/0:20,0:20:57.20:0,57,1768	0/0:23,0:23:69.22:0,69,2105	0/0:24,0:24:72.25:0,72,2173	0/0:25,0:25:75.26:0,75,2360	0/0:10,0:10:30.10:0,30,952	0/0:20,0:20:60.21:0,60,1770	0/0:27,0:27:81.28:0,81,2560	0/0:33,0:33:96.31:0,96,2838	0/0:20,0:20:57.20:0,57,1806
chr10	61394307	.	C	CA	2234.64	PASS	AB=1.000;AC=25;AF=0.893;AN=28;BaseQRankSum=-3.933;DP=247;FS=107.332;HRun=1;HaplotypeScore=25.7703;InbreedingCoeff=0.3546;MQ=60.05;MQ0=77;MQRankSum=-4.099;QD=16.93;ReadPosRankSum=5.001;VQSLOD=0.1718;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:58,0:13:35.30:0,35,404	0/1:57,0:9:20.55:21,0,89	./.	1/1:0,10:10:27.09:430,27,0	./.	./.	./.	1/1:3,2:3:6.02:95,6,0	./.	1/1:0,1:1:3.01:48,3,0	1/1:0,6:5:15.05:239,15,0	1/1:0,5:5:15.05:237,15,0	1/1:0,5:5:12.04:191,12,0	1/1:4,8:9:24.04:354,24,0	1/1:7,1:2:3.01:48,3,0	./.	1/1:2,2:1:1.55:4,2,0	./.	./.	./.	1/1:0,1:1:3.01:48,3,0	./.	./.	1/1:1,7:5:15.05:239,15,0	1/1:0,10:9:24.08:383,24,0	./.
chr10	61400510	.	TA	T	3496.99	PASS	AB=0.743;AC=50;AF=0.962;AN=52;BaseQRankSum=0.609;DP=274;FS=10.385;HRun=12;HaplotypeScore=29.8666;InbreedingCoeff=0.0313;MQ=43.13;MQ0=13;MQRankSum=2.097;QD=13.20;ReadPosRankSum=1.799;VQSLOD=2.3911;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:4,0:16:0.13:47,0,0	1/1:1,5:5:14.94:116,15,0	0/1:11,1:3:9.48:9,0,49	./.	1/1:2,0:3:6.11:18,6,0	1/1:1,7:8:17.93:139,18,0	1/1:2,9:7:20.92:162,21,0	./.	1/1:0,0:8:12.22:35,12,0	1/1:3,4:5:8.50:69,9,0	1/1:1,12:12:35.86:278,36,0	1/1:1,8:9:19.95:142,20,0	1/1:1,6:7:16.98:122,17,0	1/1:5,8:11:23.84:186,24,0	1/1:4,8:11:20.91:162,21,0	1/1:1,5:6:10.99:75,11,0	1/1:1,13:14:38.85:302,39,0	1/1:0,1:7:15.21:59,15,0	1/1:5,8:10:20.87:161,21,0	1/1:0,3:3:5.98:46,6,0	1/1:1,4:4:11.95:93,12,0	1/1:0,2:2:5.98:46,6,0	1/1:1,5:6:16.98:122,17,0	1/1:4,15:19:35.86:278,36,0	1/1:2,8:8:20.92:162,21,0	1/1:6,13:18:11.95:248,12,0	1/1:5,14:15:29.88:232,30,0	1/1:1,8:8:23.91:186,24,0
chr10	61401213	.	T	TA	1312.64	PASS	AB=0.636;AC=39;AF=0.929;AN=42;BaseQRankSum=3.073;DP=285;FS=0.000;HRun=1;HaplotypeScore=58.2421;InbreedingCoeff=0.3166;MQ=23.07;MQ0=179;MQRankSum=0.340;QD=5.36;ReadPosRankSum=0.113;VQSLOD=0.2461;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:18,1:1:2.80:13,3,0	1/1:2,3:3:8.48:41,8,0	./.	./.	0/1:6,8:8:1.25:1,0,13	1/1:11,3:3:8.33:38,8,0	1/1:4,3:3:6.11:28,6,0	1/1:21,1:1:3:25,3,0	1/1:6,7:7:19.98:100,20,0	1/1:12,9:9:27.02:250,27,0	1/1:7,11:11:6.60:96,7,0	1/1:6,4:4:11.28:54,11,0	1/1:12,3:3:7.27:33,7,0	1/1:3,4:4:9.07:47,9,0	1/1:2,5:5:14.27:71,14,0	1/1:3,2:2:5.64:27,6,0	./.	1/1:8,1:1:2.22:7,2,0	./.	1/1:1,9:8:20.58:119,21,0	./.	1/1:4,7:7:20.31:123,20,0	0/0:3,3:3:1.14:0,1,16	./.	1/1:9,7:7:19.89:98,20,0	1/1:8,6:6:15.49:140,15,0	1/1:2,6:6:17.26:96,17,0	./.
chr10	61401224	.	A	AG	1953.30	PASS	AC=42;AF=0.913;AN=46;BaseQRankSum=-0.131;DP=273;FS=13.958;HRun=0;HaplotypeScore=54.1268;InbreedingCoeff=0.3561;MQ=28.14;MQ0=166;MQRankSum=-1.231;QD=8.21;ReadPosRankSum=2.043;VQSLOD=2.1357;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:16,1:1:2.94:18,3,0	1/1:2,3:3:8.85:56,9,0	0/0:2,0:1:3.01:0,3,34	0/0:5,0:1:0:0,0,0	1/1:5,8:8:13.31:70,13,0	1/1:9,3:3:8.80:53,9,0	1/1:7,3:3:7.14:40,7,0	1/1:17,1:1:3.01:31,3,0	1/1:4,7:7:20.72:135,21,0	1/1:11,9:9:27.07:301,27,0	1/1:7,11:11:27.35:168,27,0	1/1:6,4:4:11.81:74,12,0	1/1:10,3:3:8.93:81,9,0	1/1:3,4:4:11.91:99,12,0	1/1:1,5:5:14.80:96,15,0	1/1:4,2:2:5.90:37,6,0	./.	1/1:9,1:1:2.74:12,3,0	./.	1/1:1,9:8:22.01:156,22,0	./.	1/1:2,7:7:20.83:151,21,0	1/1:3,3:3:6.37:34,6,0	./.	1/1:7,7:7:20.69:133,21,0	1/1:9,6:6:16.60:173,17,0	1/1:2,6:6:17.81:126,18,0	./.
chr10	61401385	.	A	AT	3955.50	PASS	AB=0.875;AC=54;AF=0.964;AN=56;BaseQRankSum=-2.959;DP=236;FS=11.443;HRun=1;HaplotypeScore=258.5831;InbreedingCoeff=0.0037;MQ=71.22;MQ0=6;MQRankSum=-1.349;QD=16.76;ReadPosRankSum=0.142;VQSLOD=1.4708;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,0:3:4.56:37,5,0	1/1:2,0:2:2.76:18,3,0	0/1:4,1:5:50.96:77,0,51	0/1:10,1:10:33.56:112,0,34	1/1:18,1:19:18.13:250,18,0	1/1:9,0:9:23.79:209,24,0	1/1:5,0:5:14.90:142,15,0	1/1:5,1:5:15.04:207,15,0	1/1:7,2:9:8.56:135,9,0	1/1:12,0:12:0.11:150,0,0	1/1:14,2:15:27.56:261,28,0	1/1:7,0:7:7.16:62,7,0	1/1:5,0:4:12:109,12,0	1/1:8,0:8:22.16:164,22,0	1/1:10,0:10:16.31:132,16,0	1/1:10,0:10:23.60:226,24,0	1/1:3,0:3:5.95:62,6,0	1/1:1,2:3:5.99:67,6,0	1/1:6,0:6:9.08:85,9,0	1/1:12,2:14:19.58:206,20,0	1/1:9,0:9:14.98:169,15,0	1/1:6,0:6:3.24:52,3,0	1/1:4,0:4:10.99:69,11,0	1/1:2,0:2:0.47:1,0,0	1/1:15,0:15:14.64:222,15,0	1/1:17,0:16:43.84:394,44,0	1/1:17,0:15:30.55:268,31,0	1/1:3,0:3:6.87:67,7,0
chr10	61401747	.	G	GCTAAAGC	862.65	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-2.318;DP=633;FS=9.119;HRun=0;HaplotypeScore=138.8119;InbreedingCoeff=0.9909;MQ=76.90;MQ0=0;MQRankSum=-3.352;QD=35.94;ReadPosRankSum=-2.780;VQSLOD=2.1510;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:75.24:0,75,1771	0/0:8,0:8:18.02:0,18,392	0/0:22,0:22:39.11:0,39,813	0/0:17,0:17:31.12:0,31,713	0/0:25,0:25:51.16:0,51,1213	0/0:19,0:19:51.18:0,51,1255	0/0:20,0:20:57.20:0,57,1409	1/1:17,6:20:30.09:957,30,0	0/0:25,0:25:60.21:0,60,1488	0/0:32,0:31:81.27:0,81,1953	0/0:21,0:21:48.16:0,48,1185	0/0:23,0:23:60.21:0,60,1452	0/0:27,0:27:75.26:0,75,1859	0/0:28,0:28:78.26:0,78,1884	0/0:25,0:25:63.22:0,63,1516	0/0:21,0:21:57.19:0,57,1366	0/0:29,0:29:78.27:0,78,1908	0/0:16,0:16:42.14:0,42,980	0/0:23,0:23:48.16:0,48,1179	0/0:31,0:31:81.23:0,81,1950	0/0:17,0:17:51.16:0,51,1201	0/0:23,0:23:63.22:0,63,1526	0/0:18,0:18:45.12:0,45,1002	0/0:21,0:21:60.19:0,60,1437	0/0:24,0:24:63.15:0,63,1449	0/0:23,0:23:51.13:0,51,1176	0/0:31,0:31:69.23:0,69,1560	0/0:14,0:14:39.13:0,39,967
chr10	61402214	.	AC	A	1087.78	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.634;DP=680;FS=10.474;HRun=1;HaplotypeScore=65.3037;InbreedingCoeff=0.9981;MQ=61.41;MQ0=1;MQRankSum=-0.532;QD=36.26;ReadPosRankSum=-3.437;VQSLOD=1.6143;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:93.28:0,93,1425	0/0:19,0:18:54.18:0,54,863	0/0:17,0:16:39.03:0,39,587	0/0:25,0:23:69.23:0,69,1090	0/0:22,0:22:66.21:0,66,1012	0/0:10,0:10:27.08:0,27,409	0/0:28,0:28:84.29:0,84,1335	1/1:0,30:30:87.26:1183,87,0	0/0:30,0:30:90.28:0,90,1413	0/0:24,0:24:72.25:0,72,1152	0/0:11,0:11:33.11:0,33,527	0/0:28,0:28:81.28:0,81,1288	0/0:27,0:27:81.27:0,81,1275	0/0:33,0:33:99:0,99,1582	0/0:40,0:40:99:0,120,1892	0/0:22,0:22:66.23:0,66,1053	0/0:26,0:26:78.27:0,78,1247	0/0:16,0:16:48.16:0,48,767	0/0:26,0:26:78.27:0,78,1237	0/0:18,0:18:54.17:0,54,837	0/0:46,0:46:99:0,132,2087	0/0:27,0:27:78.27:0,78,1233	0/0:11,0:11:30.10:0,30,480	0/0:29,0:29:87.30:0,87,1387	0/0:14,0:14:42.14:0,42,671	0/0:20,0:20:57.19:0,57,887	0/0:31,0:31:93.30:0,93,1463	0/0:17,0:17:51.17:0,51,815
chr10	61403226	.	C	CA	1752.70	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=-2.865;DP=607;FS=5.400;HRun=2;HaplotypeScore=59.3208;InbreedingCoeff=0.6821;MQ=76.53;MQ0=0;MQRankSum=0.673;QD=28.73;ReadPosRankSum=-5.815;VQSLOD=1.2626;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:69.22:0,69,855	0/0:12,0:12:33.10:0,33,409	0/1:14,0:14:7.41:7,0,160	0/0:13,0:13:32.85:0,33,316	0/0:28,0:28:78.24:0,78,952	0/0:29,0:29:84.26:0,84,1030	0/0:16,0:16:45.11:0,45,529	1/1:3,44:47:99:1846,132,0	0/0:19,0:19:51.15:0,51,619	0/0:33,0:33:96.28:0,96,1161	0/0:27,0:27:75.24:0,75,929	0/0:11,0:11:33.07:0,33,371	0/0:21,0:21:63.20:0,63,781	0/0:18,0:18:48.14:0,48,582	0/0:18,0:18:51.16:0,51,632	0/0:21,0:21:57.17:0,57,697	0/0:17,0:17:51.07:0,51,589	0/0:9,0:9:24.07:0,24,297	0/0:22,0:22:60.18:0,60,730	0/0:45,0:45:99:0,129,1557	0/0:8,0:8:24.07:0,24,286	0/0:28,0:28:66.19:0,66,804	0/0:25,0:25:72.19:0,72,855	0/0:15,0:15:45.13:0,45,544	0/0:24,0:24:72.21:0,72,880	0/0:18,0:18:48.14:0,48,575	0/0:32,0:32:93.25:0,93,1112	0/0:13,0:13:20.96:0,21,231
chr10	61403526	.	GCTA	G	1195.42	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=8.179;DP=626;FS=0.000;HRun=0;HaplotypeScore=86.2156;InbreedingCoeff=0.9550;MQ=72.78;MQ0=0;MQRankSum=-5.624;QD=38.56;ReadPosRankSum=-3.973;VQSLOD=3.2348;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:54.19:0,54,1241	0/0:11,0:11:33.11:0,33,761	0/0:16,0:15:41.94:0,42,919	0/0:19,0:18:51.17:0,51,1110	0/0:37,0:37:99:0,108,2436	0/0:35,0:35:99:0,105,2397	0/0:16,0:16:48.16:0,48,1086	1/1:4,27:31:81.22:1290,81,0	0/0:23,0:23:66.23:0,66,1504	0/0:38,0:38:99:0,111,2461	0/0:23,0:23:69.24:0,69,1577	0/0:22,0:22:60.21:0,60,1382	0/0:29,0:29:87.30:0,87,2003	0/0:19,0:19:57.20:0,57,1295	0/0:23,0:23:69.24:0,69,1586	0/0:21,0:21:60.21:0,60,1381	0/0:4,0:4:12.04:0,12,277	0/0:5,0:5:15.01:0,15,297	0/0:19,0:18:54.17:0,54,1200	0/0:30,0:30:90.31:0,90,2068	0/0:23,0:23:66.23:0,66,1464	0/0:33,0:33:96.32:0,96,2162	0/0:24,0:24:72.25:0,72,1659	0/0:17,0:17:51.13:0,51,1127	0/0:19,0:19:54.19:0,54,1228	0/0:30,0:30:90.31:0,90,2073	0/0:28,0:28:84.29:0,84,1921	0/0:12,0:12:33.11:0,33,760
chr10	61403770	.	ATTAGAGAGGCTAGC	A	1123.28	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.280;DP=605;FS=1.225;HRun=0;HaplotypeScore=228.7096;InbreedingCoeff=0.9619;MQ=88.79;MQ0=0;MQRankSum=-4.334;QD=66.08;ReadPosRankSum=0.175;VQSLOD=3.3572;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:96.33:0,96,4934	0/0:12,0:12:36.12:0,36,2385	0/0:23,0:23:66.20:0,66,3778	0/0:23,0:23:63.20:0,63,3219	0/0:37,0:37:99:0,105,6149	0/0:27,0:27:81.26:0,81,4591	0/0:8,0:8:21.07:0,21,1380	1/1:7,10:17:30.10:1218,30,0	0/0:17,0:17:48.16:0,48,3038	0/0:26,0:26:75.26:0,75,4094	0/0:23,0:23:66.23:0,66,3261	0/0:17,0:17:51.18:0,51,3357	0/0:25,0:25:72.25:0,72,4658	0/0:19,0:19:51.18:0,51,3401	0/0:21,0:21:54.16:0,54,3291	0/0:18,0:18:51.18:0,51,3277	0/0:13,0:13:36.10:0,36,2219	0/0:20,0:20:51.13:0,51,3265	0/0:25,0:25:72.21:0,72,3430	0/0:44,0:44:99:0,132,7811	0/0:13,0:13:36.10:0,36,2100	0/0:24,0:24:72.24:0,72,3930	0/0:22,0:22:60.21:0,60,3561	0/0:4,0:4:12.04:0,12,849	0/0:26,0:26:75.26:0,75,4143	0/0:28,0:28:84.28:0,84,4684	0/0:27,0:27:78.27:0,78,4942	0/0:7,0:7:21.07:0,21,1458
chr10	61403823	.	CA	C	2648.54	PASS	AB=0.556;AC=7;AF=0.125;AN=56;BaseQRankSum=9.719;DP=554;FS=1.388;HRun=6;HaplotypeScore=57.0635;InbreedingCoeff=0.8260;MQ=81.18;MQ0=0;MQRankSum=-2.384;QD=26.22;ReadPosRankSum=2.541;VQSLOD=3.9538;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,35:35:90.22:965,90,0	0/0:6,0:6:18.06:0,18,237	0/0:29,0:28:64.63:0,65,885	0/0:12,0:12:33.10:0,33,420	1/1:1,28:29:81.20:871,81,0	0/0:27,0:27:75.23:0,75,969	0/0:14,0:14:42.14:0,42,553	0/0:29,0:29:81.26:0,81,1066	1/1:2,20:22:58.70:617,59,0	0/0:25,0:25:66.21:0,66,863	0/0:19,0:19:57.19:0,57,749	0/0:13,0:13:39.08:0,39,494	0/0:14,0:14:42.14:0,42,549	0/0:14,0:14:39.13:0,39,508	0/0:24,0:24:72.23:0,72,948	0/0:15,0:15:45.11:0,45,548	0/0:18,0:18:54.13:0,54,690	0/1:3,12:15:36.85:345,0,37	0/0:26,0:26:75.23:0,75,962	0/0:34,0:34:90.28:0,90,1171	0/0:14,0:14:42.14:0,42,553	0/0:18,0:18:51.17:0,51,671	0/0:18,0:18:54.16:0,54,696	0/0:11,0:11:30.10:0,30,394	0/0:19,0:19:51.17:0,51,670	0/0:26,0:26:78.24:0,78,1012	0/0:22,0:22:66.21:0,66,868	0/0:6,0:6:12.04:0,12,158
chr10	61408048	.	TTGGTGGTGGTGGTGGTGGTGGTGG	T	1167.16	PASS	AC=14;AF=0.538;AN=26;BaseQRankSum=2.245;DP=304;FS=0.000;HRun=0;HaplotypeScore=124.9714;InbreedingCoeff=0.4464;MQ=57.54;MQ0=32;MQRankSum=-1.347;QD=17.42;ReadPosRankSum=0.041;VQSLOD=2.2692;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:9.03:0,9,325	./.	./.	./.	./.	./.	0/0:10,0:10:6:0,6,157	./.	./.	./.	./.	1/1:7,1:8:2.70:185,3,0	1/1:4,1:5:3.01:186,3,0	1/1:10,0:10:3:25,3,0	./.	1/1:7,3:10:6.02:372,6,0	./.	0/0:4,0:4:3.01:0,3,236	./.	1/1:8,2:9:6.02:295,6,0	1/1:16,0:13:3:25,3,0	./.	0/0:4,0:4:3:0,3,27	0/0:10,0:10:6.02:0,6,394	./.	./.	1/1:7,1:8:3.01:186,3,0	0/0:1,0:1:3.01:0,3,118
chr10	61410364	.	TC	T	8284.28	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=3.128;DP=643;FS=9.780;HRun=9;HaplotypeScore=71.5262;InbreedingCoeff=0.9980;MQ=76.85;MQ0=1;MQRankSum=-1.986;QD=22.27;ReadPosRankSum=3.148;VQSLOD=5.4996;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:49:79.54:0,80,404	1/1:0,13:13:33.02:302,33,0	0/0:13,0:13:18.52:0,19,196	0/0:18,0:18:26.93:0,27,356	0/0:21,0:21:46.81:0,47,628	0/0:20,0:20:57.16:0,57,646	0/0:26,1:27:41.70:0,42,704	0/0:21,0:21:42.10:0,42,473	0/0:2,0:19:48.74:0,49,291	1/1:4,22:25:60.02:548,60,0	1/1:3,16:19:48.01:436,48,0	1/1:3,20:23:45.02:412,45,0	1/1:2,21:23:57.03:521,57,0	1/1:3,25:28:69.03:631,69,0	1/1:5,28:33:40.42:624,40,0	1/1:4,21:25:48.02:439,48,0	1/1:1,17:18:48.02:439,48,0	0/0:3,0:12:19.95:0,20,103	1/1:2,21:23:60.03:549,60,0	1/1:3,23:26:63.03:576,63,0	1/1:4,27:32:80.55:721,81,0	0/0:23,1:24:38.80:0,39,689	0/0:18,0:18:51.15:0,51,588	0/0:29,0:29:72.11:0,72,800	1/1:1,19:20:51.02:467,51,0	1/1:0,22:22:66.04:604,66,0	1/1:1,28:29:74.79:686,75,0	1/1:0,12:12:36.02:330,36,0
chr10	61412602	.	A	ATG	941.89	PASS	AB=0.631;AC=1;AF=0.018;AN=56;BaseQRankSum=-5.397;DP=768;FS=5.236;HRun=0;HaplotypeScore=107.1658;InbreedingCoeff=0.5536;MQ=83.64;MQ0=0;MQRankSum=1.495;QD=22.97;ReadPosRankSum=-3.370;VQSLOD=3.4559;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,111,1341	0/0:11,0:11:30.08:0,30,368	0/0:36,0:35:70.29:0,70,713	0/0:34,0:34:70.61:0,71,679	0/0:27,0:27:71.88:0,72,852	0/0:23,0:23:65.86:0,66,777	0/0:31,0:31:75.11:0,75,886	0/1:17,22:41:1.86:1016,0,2	0/0:25,0:25:57.17:0,57,712	0/0:36,0:36:96.13:0,96,1187	0/0:24,0:24:66.18:0,66,813	0/0:23,0:23:57.01:0,57,701	0/0:25,0:25:66.21:0,66,839	0/0:15,0:15:35.93:0,36,420	0/0:21,0:21:54.16:0,54,674	0/0:27,0:27:78.01:0,78,923	0/0:37,0:37:99:0,102,1242	0/0:10,0:10:29.91:0,30,342	0/0:29,0:29:62.65:0,63,632	0/0:29,0:29:69.05:0,69,854	0/0:39,0:39:83.96:0,84,963	0/0:24,0:24:57.17:0,57,713	0/0:22,0:22:62.99:0,63,736	0/0:34,0:34:84.20:0,84,1033	0/0:28,0:28:69:0,69,811	0/0:22,0:22:50.99:0,51,625	0/0:30,0:30:81.23:0,81,1002	0/0:15,0:15:36.05:0,36,425
chr10	61412914	.	T	TAAAA	4812.31	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=0.837;DP=644;FS=0.880;HRun=8;HaplotypeScore=112.5106;InbreedingCoeff=0.9904;MQ=83.94;MQ0=1;MQRankSum=-4.597;QD=38.19;ReadPosRankSum=-4.951;VQSLOD=2.2854;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,11:16:18.65:545,19,0	0/0:12,0:12:33.08:0,33,474	0/0:22,0:23:14.32:0,14,410	0/0:24,0:24:17.57:0,18,556	1/1:9,26:38:87.27:1810,87,0	0/0:23,0:23:48.11:0,48,725	0/0:27,0:27:72.20:0,72,1068	1/1:15,0:39:84.25:1034,84,0	1/1:3,15:18:39.12:908,39,0	0/0:30,0:30:72.17:0,72,1089	0/0:23,0:23:57.16:0,57,861	0/0:26,0:26:75.23:0,75,1114	0/0:20,0:20:51.11:0,51,730	0/0:22,0:22:54.15:0,54,797	0/0:19,0:19:42.08:0,42,636	0/0:21,0:21:54.14:0,54,797	0/0:26,0:26:72.22:0,72,1068	1/1:2,13:15:21.07:514,21,0	0/0:25,0:25:59.72:0,60,905	0/0:38,0:38:99:0,105,1587	0/0:12,0:12:36.12:0,36,545	0/0:28,0:28:63.20:0,63,953	0/0:26,0:26:57.16:0,57,862	0/0:15,0:15:42.12:0,42,634	0/0:26,0:26:66.66:0,67,979	0/0:20,0:19:54.18:0,54,816	0/0:23,0:23:57.04:0,57,791	0/0:8,0:8:24.08:0,24,363
chr10	61414769	.	G	GTT	2093.64	PASS	AB=0.629;AC=37;AF=0.661;AN=56;BaseQRankSum=-6.970;DP=417;FS=2.137;HRun=10;HaplotypeScore=75.5429;InbreedingCoeff=0.4813;MQ=60.06;MQ0=10;MQRankSum=0.764;QD=6.60;ReadPosRankSum=2.925;VQSLOD=-0.4578;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:27.05:0,27,273	1/1:0,0:7:14.97:53,15,0	0/1:7,0:2:0:0,0,0	0/0:12,0:8:1.94:0,2,89	0/0:17,0:15:35.99:0,36,347	1/1:4,0:13:22.33:78,22,0	1/1:2,0:13:19.96:70,20,0	0/0:12,0:11:27.92:0,28,120	0/0:15,0:16:29.79:0,30,357	1/1:6,0:18:3.92:119,4,0	0/1:4,1:12:12.28:68,0,12	0/1:3,1:19:2.54:60,0,3	0/1:4,0:12:7.04:67,0,7	0/1:2,0:10:12.66:34,0,13	1/1:2,0:16:29.82:104,30,0	1/1:3,0:12:22.46:79,22,0	1/1:4,0:15:17.47:61,17,0	0/0:16,0:16:14.74:0,15,204	1/1:2,0:18:42.42:149,42,0	1/1:6,0:26:42.42:149,42,0	1/1:3,0:11:19.96:70,20,0	0/1:3,0:11:7.46:47,0,7	0/1:1,0:10:7.55:47,0,8	1/1:2,0:9:12.48:44,12,0	1/1:1,18:21:36.52:634,37,0	1/1:3,1:20:16.20:176,16,0	1/1:3,0:24:37.43:132,37,0	1/1:1,0:6:9.98:35,10,0
chr10	61414799	.	AT	A	669.16	PASS	AB=0.970;AC=11;AF=0.196;AN=56;BaseQRankSum=-0.143;DP=380;FS=10.665;HRun=9;HaplotypeScore=60.8724;InbreedingCoeff=0.5884;MQ=66.81;MQ0=7;MQRankSum=0.846;QD=6.43;ReadPosRankSum=2.097;VQSLOD=0.3368;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,9:13:12:110,12,0	0/0:7,0:6:12.04:0,12,138	0/1:21,0:12:8.38:8,0,140	0/1:13,0:8:5.63:6,0,16	1/1:3,11:14:15.15:257,15,0	0/0:11,0:11:21.05:0,21,234	0/0:11,0:11:15.04:0,15,172	0/0:3,0:3:2.99:0,3,23	1/1:2,14:16:3.85:270,4,0	0/0:15,0:15:36.08:0,36,396	0/1:9,1:10:9.38:9,0,155	0/0:13,0:13:18.01:0,18,193	0/0:12,0:12:27.08:0,27,312	0/0:11,0:10:17.75:0,18,170	0/0:18,0:16:36.09:0,36,405	0/0:10,0:8:21.06:0,21,242	0/0:18,1:15:30.09:0,30,343	1/1:5,10:13:18.01:165,18,0	0/0:15,0:14:39.12:0,39,450	0/0:24,0:24:69.08:0,69,759	0/0:8,0:8:18.05:0,18,208	0/0:7,0:7:15.04:0,15,173	0/0:11,0:11:27.07:0,27,302	0/0:8,1:7:15.04:0,15,172	0/0:19,0:18:45.09:0,45,500	0/0:24,0:24:60.17:0,60,683	0/0:23,0:23:45.10:0,45,504	0/0:6,0:6:9.03:0,9,104
chr10	61415820	.	C	CA	660.82	PASS	AB=0.955;AC=4;AF=0.071;AN=56;BaseQRankSum=4.119;DP=530;FS=7.147;HRun=9;HaplotypeScore=56.6771;InbreedingCoeff=0.5529;MQ=72.80;MQ0=0;MQRankSum=-0.364;QD=11.20;ReadPosRankSum=-4.784;VQSLOD=1.2650;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:44.39:0,44,490	0/0:6,0:6:18:0,18,156	0/1:13,0:12:4.77:5,0,108	0/0:16,0:16:35.95:0,36,306	0/0:28,1:29:41.76:0,42,587	0/0:29,1:30:47.80:0,48,643	0/1:9,1:10:3.19:3,0,204	1/1:16,18:36:74.66:754,75,0	0/0:17,0:17:50.97:0,51,438	0/0:20,0:20:50.96:0,51,440	0/0:24,2:26:32.77:0,33,509	0/0:15,0:15:38.99:0,39,339	0/0:18,0:18:50.99:0,51,443	0/0:11,0:11:26.97:0,27,229	0/0:16,0:16:44.99:0,45,391	0/0:15,0:15:41.18:0,41,339	0/0:24,0:24:62.96:0,63,547	0/0:20,0:20:47.98:0,48,417	0/0:19,0:19:50.98:0,51,443	0/0:22,0:22:56.98:0,57,495	0/0:18,0:19:53.02:0,53,448	0/0:15,0:15:35.98:0,36,312	0/0:17,0:17:41.95:0,42,360	0/0:16,0:16:47.99:0,48,416	0/0:12,0:12:29.97:0,30,257	0/0:21,0:21:53.93:0,54,461	0/0:29,0:29:77.96:0,78,677	0/0:13,0:13:35.98:0,36,312
chr10	61416443	.	TA	T	492.33	PASS	AC=10;AF=0.192;AN=52;BaseQRankSum=5.531;DP=467;FS=32.169;HRun=7;HaplotypeScore=35.7928;InbreedingCoeff=0.7731;MQ=30.09;MQ0=95;MQRankSum=-4.955;QD=8.07;ReadPosRankSum=0.981;VQSLOD=-0.4531;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,4:2:3:31,3,0	0/0:4,0:3:6.02:0,6,75	./.	./.	1/1:6,11:13:27.06:275,27,0	0/0:13,0:7:9.03:0,9,113	0/0:10,0:3:9.03:0,9,113	1/1:7,4:3:9.02:92,9,0	1/1:4,8:8:21.05:214,21,0	0/0:25,0:19:51.15:0,51,627	0/0:16,0:11:9.03:0,9,113	0/0:8,0:4:2.97:0,3,20	0/0:20,0:17:27.09:0,27,339	0/0:21,0:15:18.02:0,18,208	0/0:19,0:14:23.98:0,24,254	0/0:13,0:9:17.94:0,18,174	0/0:22,0:11:15.05:0,15,189	1/1:7,2:2:3.01:31,3,0	0/0:32,0:10:30.05:0,30,345	0/0:32,0:22:42.13:0,42,517	0/0:19,0:7:12:0,12,133	0/0:22,0:11:27.09:0,27,338	0/0:24,0:17:42.09:0,42,510	0/0:20,0:9:12.04:0,12,149	0/0:22,0:16:27.04:0,27,322	0/0:23,0:18:45.13:0,45,552	0/0:27,0:19:39.12:0,39,490	0/0:14,0:6:15.05:0,15,189
chr10	61417435	.	T	TA	710.20	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=-5.821;DP=352;FS=0.831;HRun=9;HaplotypeScore=33.9443;InbreedingCoeff=0.4706;MQ=62.59;MQ0=10;MQRankSum=-4.188;QD=13.93;ReadPosRankSum=-4.266;VQSLOD=1.6534;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:58.57:0,59,530	0/0:3,0:3:2.99:0,3,26	0/1:16,0:7:19.71:20,0,38	0/0:15,0:8:14.92:0,15,123	0/0:23,0:22:56.99:0,57,495	0/0:14,0:14:41.99:0,42,364	0/0:8,0:8:17.99:0,18,156	1/1:10,25:30:72.19:795,72,0	0/0:8,0:8:20.99:0,21,182	0/0:10,0:10:29.99:0,30,260	0/0:17,0:16:44.99:0,45,390	0/0:6,0:6:18:0,18,156	0/0:10,0:9:26.99:0,27,234	0/0:7,0:7:18:0,18,156	0/0:7,0:7:20.98:0,21,179	0/0:10,0:10:26.99:0,27,234	0/0:16,0:16:35.96:0,36,312	0/0:17,0:15:44.97:0,45,387	0/0:19,0:16:44.99:0,45,390	0/0:14,1:15:2.82:0,3,253	0/0:7,0:7:17.99:0,18,156	0/0:6,0:6:8.98:0,9,78	0/0:5,0:5:14.98:0,15,127	0/0:8,0:8:21:0,21,182	0/0:17,0:17:50.99:0,51,442	0/0:10,0:10:29.99:0,30,260	0/0:11,0:11:32.99:0,33,286	0/0:7,0:7:20.98:0,21,178
chr10	61418369	.	A	AT	624.34	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=8.298;DP=822;FS=3.740;HRun=0;HaplotypeScore=83.3836;InbreedingCoeff=0.9915;MQ=72.71;MQ0=0;MQRankSum=-3.347;QD=21.53;ReadPosRankSum=-2.801;VQSLOD=4.1024;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,141,1970	0/0:6,0:6:18.06:0,18,252	0/0:44,0:42:99:0,126,1682	0/0:26,0:26:69.20:0,69,907	0/0:26,0:26:78.25:0,78,1074	0/0:36,0:36:99:0,108,1495	0/0:23,0:23:69.21:0,69,947	1/1:0,25:27:75.11:719,75,0	0/0:34,0:34:99:0,99,1321	0/0:37,0:37:99:0,111,1519	0/0:27,0:27:75.25:0,75,1042	0/0:25,0:25:75.25:0,75,1049	0/0:24,0:24:69.21:0,69,933	0/0:35,0:35:99:0,105,1398	0/0:37,0:37:99:0,111,1552	0/0:29,0:29:81.26:0,81,1111	0/0:18,0:18:54.17:0,54,738	0/0:10,0:10:30.08:0,30,399	0/0:24,0:24:72.22:0,72,975	0/0:28,0:28:84.28:0,84,1174	0/0:44,0:44:99:0,129,1755	0/0:39,0:39:99:0,117,1636	0/0:28,0:28:84.25:0,84,1127	0/0:27,0:27:81.26:0,81,1113	0/0:27,0:27:81.25:0,81,1102	0/0:42,0:42:99:0,126,1732	0/0:36,0:36:99:0,108,1473	0/0:14,0:14:42.14:0,42,586
chr10	61418370	.	AGC	A	688.54	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=8.854;DP=817;FS=0.692;HRun=0;HaplotypeScore=98.4736;InbreedingCoeff=0.9915;MQ=71.77;MQ0=0;MQRankSum=-4.024;QD=23.74;ReadPosRankSum=-4.103;VQSLOD=3.0704;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,141,2812	0/0:6,0:6:18.06:0,18,366	0/0:42,0:40:99:0,108,2181	0/0:26,0:26:39.07:0,39,1084	0/0:26,0:26:78.25:0,78,1547	0/0:36,0:36:99:0,108,2181	0/0:23,0:23:69.24:0,69,1388	1/1:4,25:27:78.05:783,78,0	0/0:34,0:34:99:0,102,2018	0/0:35,0:35:99:0,105,2035	0/0:29,0:29:84.26:0,84,1605	0/0:25,0:25:75.26:0,75,1524	0/0:22,0:22:66.23:0,66,1339	0/0:33,0:33:96.33:0,96,1928	0/0:39,0:39:99:0,117,2319	0/0:29,0:29:87.26:0,87,1678	0/0:18,0:18:54.16:0,54,1057	0/0:10,0:10:30.10:0,30,596	0/0:22,0:22:66.23:0,66,1341	0/0:30,0:30:90.31:0,90,1797	0/0:43,0:43:99:0,129,2535	0/0:40,0:40:99:0,120,2408	0/0:27,0:27:81.28:0,81,1620	0/0:27,0:27:81.23:0,81,1592	0/0:26,0:26:78.27:0,78,1584	0/0:42,0:42:99:0,126,2456	0/0:37,0:37:99:0,111,2213	0/0:14,0:14:42.14:0,42,850
chr10	61421383	.	AC	A	1425.06	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-5.627;DP=745;FS=2.090;HRun=1;HaplotypeScore=161.3664;InbreedingCoeff=0.9838;MQ=87.38;MQ0=0;MQRankSum=-0.742;QD=35.63;ReadPosRankSum=-0.190;VQSLOD=3.2032;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:90.22:0,90,1271	0/0:12,0:12:36.12:0,36,541	0/0:34,0:34:99:0,102,1535	0/0:20,0:20:60.16:0,60,928	0/0:25,0:25:75.25:0,75,1106	0/0:35,0:35:99:0,105,1647	0/0:27,0:27:81.21:0,81,1198	0/0:32,0:32:96.27:0,96,1369	0/0:34,0:34:99:0,102,1470	0/0:44,0:44:99:0,132,1898	0/0:32,0:32:93.30:0,93,1353	0/0:25,0:25:75.25:0,75,1115	0/0:28,0:28:81.23:0,81,1131	0/0:32,0:32:93.30:0,93,1357	0/0:25,0:25:75.25:0,75,1099	0/0:24,0:24:66.22:0,66,990	0/0:18,0:18:54.16:0,54,770	0/0:18,0:18:51.09:0,51,712	0/0:14,0:14:39.12:0,39,560	0/0:26,0:26:75.17:0,75,1088	0/0:38,0:38:99:0,111,1607	0/0:22,0:22:66.19:0,66,1001	0/0:24,0:24:72.23:0,72,1126	0/0:27,0:27:78.25:0,78,1216	0/0:28,0:28:78.24:0,78,1136	1/1:0,34:34:99:1374,102,0	0/0:31,0:31:90.30:0,90,1337	1/1:0,6:6:12.04:167,12,0
chr10	61421422	.	G	GGTA	25013.17	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-2.192;DP=749;FS=0.561;HRun=0;HaplotypeScore=127.7633;InbreedingCoeff=0.9853;MQ=80.00;MQ0=0;MQRankSum=-4.718;QD=62.07;ReadPosRankSum=1.395;VQSLOD=6.3777;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,105,1800	1/1:2,9:11:30.10:698,30,0	0/0:28,0:28:75.26:0,75,1287	0/0:15,0:15:42.14:0,42,741	0/0:30,0:30:90.31:0,90,1579	0/0:40,0:40:99:0,114,1978	0/0:21,0:21:60.18:0,60,1029	1/1:10,30:45:99:2939,135,0	0/0:35,0:35:99:0,105,1806	1/1:4,29:36:99:2310,99,0	1/1:3,25:28:72.25:1678,72,0	1/1:1,24:25:72.25:1702,72,0	1/1:1,22:23:63.22:1456,63,0	1/1:0,28:30:78.27:1843,78,0	1/1:1,21:22:66.23:1538,66,0	1/1:1,25:28:81.28:1890,81,0	1/1:3,20:24:60.21:1418,60,0	0/0:15,0:15:45.15:0,45,777	1/1:3,11:14:23.88:891,24,0	1/1:4,25:31:81.28:1857,81,0	1/1:4,27:31:63.22:1490,63,0	0/0:31,0:31:87.30:0,87,1534	0/0:33,0:33:90.31:0,90,1583	0/0:27,0:27:81.26:0,81,1398	1/1:2,15:19:45.15:1064,45,0	0/0:30,0:30:84.29:0,84,1479	1/1:4,30:36:96.33:2240,96,0	0/0:4,0:4:6.02:0,6,106
chr10	61427186	.	CA	C	12496.35	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=2.460;DP=528;FS=1.082;HRun=1;HaplotypeScore=70.0822;InbreedingCoeff=0.9904;MQ=83.49;MQ0=0;MQRankSum=-3.215;QD=38.57;ReadPosRankSum=1.026;VQSLOD=5.4624;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:63.21:0,63,996	1/1:2,4:6:18.06:251,18,0	0/0:19,0:19:54.18:0,54,838	0/0:14,0:14:38.81:0,39,526	0/0:24,0:24:63.18:0,63,951	0/0:23,0:23:69.19:0,69,1074	0/0:20,0:20:60.20:0,60,951	1/1:0,20:20:60.18:806,60,0	0/0:23,1:24:30.28:0,30,1060	1/1:2,17:19:54.17:726,54,0	1/1:1,15:16:39.12:528,39,0	1/1:3,13:16:45.13:599,45,0	1/1:1,22:23:66.20:902,66,0	1/1:0,23:23:66.22:923,66,0	1/1:2,17:19:57.17:763,57,0	1/1:1,25:26:69.22:946,69,0	1/1:1,18:19:57.12:755,57,0	0/0:20,0:20:60.20:0,60,959	1/1:0,13:13:39.13:546,39,0	1/1:2,17:19:51.15:695,51,0	1/1:5,16:20:54.18:744,54,0	0/0:13,0:13:39.11:0,39,579	0/0:10,0:10:30.10:0,30,479	0/0:15,0:15:45.15:0,45,719	1/1:1,24:25:63.21:881,63,0	1/1:0,24:24:72.24:1006,72,0	1/1:2,30:32:96.28:1303,96,0	1/1:0,3:3:9.03:125,9,0
chr10	61427253	.	C	CCA	14819.47	PASS	AB=0.588;AC=33;AF=0.589;AN=56;BaseQRankSum=-11.988;DP=589;FS=0.673;HRun=0;HaplotypeScore=81.7656;InbreedingCoeff=0.9063;MQ=86.16;MQ0=0;MQRankSum=-4.969;QD=42.22;ReadPosRankSum=2.121;VQSLOD=6.5985;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:60.17:0,60,757	1/1:1,11:12:36.10:578,36,0	0/0:25,0:25:56.75:0,57,700	0/0:20,0:20:51.13:0,51,629	0/0:36,0:36:90.29:0,90,1157	0/0:21,0:21:51.15:0,51,642	0/0:14,0:14:39.12:0,39,489	1/1:6,22:28:66.21:1066,66,0	0/0:21,0:21:60.18:0,60,757	1/1:4,30:34:93.32:1567,93,0	1/1:1,23:24:57.19:960,57,0	1/1:2,14:16:42.14:708,42,0	1/1:5,18:23:57.20:961,57,0	1/1:5,13:18:3.53:619,4,0	1/1:2,23:25:69.24:1164,69,0	1/1:1,15:16:45.15:759,45,0	1/1:4,12:16:42.14:708,42,0	0/0:24,0:24:60.15:0,60,748	1/1:4,8:12:30.10:505,30,0	1/1:3,23:26:60.21:1007,60,0	1/1:3,16:19:45.15:759,45,0	0/0:22,0:22:63.15:0,63,777	0/0:18,0:18:48.16:0,48,617	0/0:13,0:13:36.10:0,36,448	1/1:3,24:27:78.25:1287,78,0	1/1:5,11:16:42.13:676,42,0	1/1:4,25:29:69.24:1164,69,0	0/1:3,7:10:14.52:330,0,15
chr10	61427588	.	CA	C	2036.64	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=10.725;DP=642;FS=18.233;HRun=6;HaplotypeScore=58.9715;InbreedingCoeff=0.8825;MQ=76.95;MQ0=0;MQRankSum=-2.016;QD=23.14;ReadPosRankSum=0.718;VQSLOD=1.9766;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,13:15:36.09:387,36,0	0/0:14,0:14:42.14:0,42,553	0/0:17,0:17:36.11:0,36,446	0/1:9,0:9:7.94:8,0,227	1/1:4,28:32:81.20:870,81,0	0/0:28,0:28:81.26:0,81,1066	0/0:22,0:22:66.20:0,66,853	0/0:25,0:25:60.20:0,60,790	1/1:0,16:16:45.11:484,45,0	0/0:32,0:32:93.30:0,93,1224	0/0:22,0:22:63.20:0,63,829	0/0:23,0:23:66.21:0,66,868	0/0:33,0:33:93.29:0,93,1209	0/0:21,0:21:60.20:0,60,790	0/0:24,0:24:63.20:0,63,829	0/0:18,0:18:48.16:0,48,631	0/0:17,0:17:45.14:0,45,578	1/1:2,14:16:42.10:451,42,0	0/0:17,0:17:42.14:0,42,552	0/0:37,0:37:99:0,108,1420	0/0:17,0:17:51.17:0,51,671	0/0:34,0:34:93.30:0,93,1221	0/0:23,0:23:63.19:0,63,814	0/0:23,0:23:63.17:0,63,799	0/0:22,0:22:63.20:0,63,829	0/0:30,0:30:90.29:0,90,1184	0/0:48,0:48:99:0,135,1763	0/0:7,0:7:18.06:0,18,237
chr10	61428628	.	ACAACTCACCACTTCCAGAG	A	5658.51	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=10.431;DP=672;FS=7.015;HRun=0;HaplotypeScore=314.9390;InbreedingCoeff=0.9938;MQ=83.17;MQ0=0;MQRankSum=-8.402;QD=61.51;ReadPosRankSum=2.647;VQSLOD=3.4379;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:2,30:32:24.04:1093,24,0	0/0:5,0:5:15.04:0,15,1124	0/0:32,0:31:87.13:0,87,3188	0/0:28,0:28:72.59:0,73,3347	1/1:3,21:24:47.61:1674,48,0	0/0:22,0:22:63.16:0,63,4336	0/0:20,0:20:57.16:0,57,3661	0/0:29,0:29:75.19:0,75,3662	1/1:1,17:18:32.95:1766,33,0	0/0:28,0:28:81.26:0,81,5810	0/0:24,0:24:66.17:0,66,4658	0/0:21,0:21:60.17:0,60,4283	0/0:26,0:26:72.15:0,72,4738	0/0:22,0:22:57.15:0,57,3665	0/0:30,0:30:84.22:0,84,6217	0/0:23,0:23:66.20:0,66,5019	0/0:17,0:17:51.13:0,51,3317	1/1:0,18:18:21.07:1125,21,0	0/0:18,0:18:51.12:0,51,2458	0/0:32,0:32:87.28:0,87,6906	0/0:31,0:31:87.20:0,87,6050	0/0:24,0:24:72.22:0,72,5800	0/0:21,0:21:57.15:0,57,4156	0/0:23,0:23:66.20:0,66,4975	0/0:34,0:34:99:0,102,7580	0/0:25,0:25:75.22:0,75,5239	0/0:27,0:26:78.23:0,78,5959	0/0:18,0:18:51.16:0,51,4265
chr10	61430815	.	A	AT	4190.32	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-14.198;DP=622;FS=0.000;HRun=2;HaplotypeScore=95.3249;InbreedingCoeff=0.9997;MQ=89.73;MQ0=2;MQRankSum=-1.238;QD=40.29;ReadPosRankSum=3.392;VQSLOD=3.4295;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,105,1274	0/0:11,0:11:27.07:0,27,322	0/0:29,0:29:79.11:0,79,946	0/0:19,0:19:45.08:0,45,518	0/0:31,0:31:84.24:0,84,1016	1/1:2,20:22:57.19:821,57,0	1/1:0,17:17:51.17:735,51,0	0/0:21,0:21:60.19:0,60,744	0/0:16,0:16:48.15:0,48,595	0/0:26,0:26:75.24:0,75,930	0/0:31,0:31:87.26:0,87,1064	0/0:30,0:30:90.28:0,90,1113	0/0:19,0:19:48.15:0,48,592	0/0:16,0:16:45.14:0,45,557	0/0:22,0:22:60.18:0,60,731	0/0:15,0:14:42.08:0,42,492	0/0:24,0:23:57.11:0,57,687	0/0:16,0:16:42.13:0,42,520	0/0:17,0:17:45.14:0,45,558	0/0:28,0:28:84.26:0,84,1041	0/0:20,0:20:60.18:0,60,733	1/1:0,23:23:63.21:907,63,0	1/1:0,16:16:48.16:691,48,0	1/1:0,26:26:72.24:1037,72,0	0/0:20,0:20:54.16:0,54,657	0/0:21,0:21:60.19:0,60,743	0/0:35,0:34:96.26:0,96,1171	0/0:15,0:15:36.11:0,36,446
chr10	61430829	.	G	GTT	13338.47	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-15.309;DP=593;FS=3.970;HRun=8;HaplotypeScore=75.0568;InbreedingCoeff=0.9993;MQ=85.28;MQ0=2;MQRankSum=-2.891;QD=36.85;ReadPosRankSum=-0.013;VQSLOD=4.6916;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:96.19:0,96,1039	1/1:0,11:11:30.10:476,30,0	0/0:25,0:25:51.08:0,51,558	0/0:13,0:13:26.32:0,26,285	0/0:29,0:29:84.21:0,84,926	0/0:22,0:22:63.17:0,63,702	0/0:16,0:16:36.08:0,36,401	1/1:3,0:16:32.21:166,32,0	0/0:16,0:16:42.10:0,42,468	1/1:2,20:22:60.17:899,60,0	1/1:2,28:32:87.19:1305,87,0	1/1:4,25:31:74.74:1132,75,0	1/1:1,22:23:63.21:1000,63,0	1/1:2,14:16:42.14:667,42,0	1/1:0,21:21:57.19:905,57,0	1/1:1,12:13:29.59:437,30,0	1/1:1,20:20:48.16:762,48,0	0/0:12,0:12:30.07:0,30,334	1/1:2,8:12:27.08:390,27,0	1/1:3,30:33:90.12:1292,90,0	1/1:3,12:15:33.11:524,33,0	0/0:23,0:23:66.18:0,66,735	0/0:16,0:16:48.11:0,48,524	0/0:25,0:25:72.18:0,72,792	1/1:4,14:18:42.14:667,42,0	1/1:3,20:23:57.13:853,57,0	1/1:8,29:37:77.75:1197,78,0	1/1:0,16:16:42.14:667,42,0
chr10	61430973	.	GA	G	348.86	PASS	AB=0.933;AC=3;AF=0.054;AN=56;BaseQRankSum=-2.591;DP=567;FS=0.865;HRun=7;HaplotypeScore=131.3278;InbreedingCoeff=0.6150;MQ=55.86;MQ0=3;MQRankSum=-0.567;QD=12.03;ReadPosRankSum=-2.201;VQSLOD=1.7717;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:68.99:0,69,801	0/0:11,0:11:20.72:0,21,141	0/0:21,0:9:24.05:0,24,275	0/1:13,0:7:26.51:27,0,95	0/0:31,0:31:87.23:0,87,1053	0/0:15,0:15:44.69:0,45,323	0/0:21,0:21:59.46:0,59,415	0/0:29,0:25:34.49:0,34,303	1/1:1,14:15:42.09:428,42,0	0/0:18,0:18:46.35:0,46,259	0/0:19,0:19:44.14:0,44,288	0/0:19,0:19:38.30:0,38,243	0/0:15,0:15:37.98:0,38,228	0/0:15,0:15:28.90:0,29,168	0/0:16,0:16:32.29:0,32,193	0/0:16,0:16:35.21:0,35,214	0/0:25,0:25:55.11:0,55,357	0/0:22,2:24:36.51:0,37,760	0/0:15,0:15:31.92:0,32,180	0/0:24,0:24:55.33:0,55,327	0/0:8,0:8:14.80:0,15,102	0/0:18,0:18:53.59:0,54,380	0/0:30,0:30:74.40:0,74,527	0/0:27,0:27:71.43:0,71,506	0/0:27,0:27:67.77:0,68,425	0/0:26,0:26:64.26:0,64,376	0/0:29,0:30:66.18:0,66,409	0/0:14,0:14:9.76:0,10,97
chr10	61430981	.	GAAGA	G	11210.17	PASS	AB=0.568;AC=33;AF=0.589;AN=56;BaseQRankSum=13.763;DP=552;FS=5.023;HRun=0;HaplotypeScore=122.3230;InbreedingCoeff=0.9286;MQ=58.34;MQ0=1;MQRankSum=-2.356;QD=35.82;ReadPosRankSum=1.907;VQSLOD=4.9277;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:26:66.22:0,66,1489	1/1:0,8:8:18.06:295,18,0	0/0:21,0:11:24.08:0,24,507	0/0:15,0:8:4.63:0,5,126	0/0:31,0:31:84.29:0,84,2115	0/0:17,0:17:51.17:0,51,1213	0/0:23,0:23:60.21:0,60,1389	1/1:7,21:24:51.08:767,51,0	0/0:16,0:16:45.15:0,45,983	1/1:3,14:17:42.10:699,42,0	1/1:5,11:16:30.01:456,30,0	1/1:1,16:17:36.12:628,36,0	1/1:1,15:16:36.12:630,36,0	1/1:0,17:17:30.10:525,30,0	1/1:0,15:15:33.11:576,33,0	1/1:1,13:14:33.11:578,33,0	0/1:6,19:25:1.16:638,0,1	0/0:22,0:23:60.20:0,60,1440	1/1:1,18:19:57.07:780,57,0	1/1:5,22:27:57.12:898,57,0	1/1:2,7:9:9.03:158,9,0	0/0:17,0:17:45.15:0,45,1094	0/0:24,0:24:69.24:0,69,1684	0/0:25,0:25:63.20:0,63,1479	1/1:2,23:25:60.21:1051,60,0	1/1:1,21:22:63.20:1062,63,0	1/1:4,23:27:63.13:1053,63,0	1/1:0,11:11:24.08:418,24,0
chr10	61432709	.	GC	G	14275.64	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=10.205;DP=725;FS=1.543;HRun=7;HaplotypeScore=78.8103;InbreedingCoeff=0.9995;MQ=87.41;MQ0=0;MQRankSum=-4.923;QD=25.49;ReadPosRankSum=3.665;VQSLOD=5.5052;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,105,1281	1/1:0,10:10:24.05:245,24,0	0/0:28,0:29:54.85:0,55,793	0/0:21,0:21:36.10:0,36,427	0/0:30,0:30:78.20:0,78,953	1/1:1,17:18:39.09:398,39,0	1/1:1,23:24:57.13:582,57,0	1/1:3,21:24:63.13:635,63,0	0/0:24,0:24:66.19:0,66,816	1/1:0,27:27:81.17:819,81,0	1/1:4,27:31:78.18:796,78,0	1/1:0,16:16:39.09:398,39,0	1/1:0,23:23:60.14:612,60,0	1/1:0,24:24:54.12:551,54,0	1/1:1,28:29:66.15:673,66,0	1/1:2,18:20:51.11:520,51,0	1/1:1,37:38:99:1071,105,0	0/0:22,0:22:66.14:0,66,785	1/1:1,15:16:42.09:428,42,0	1/1:4,35:39:98.64:973,99,0	1/1:2,18:20:48.11:490,48,0	1/1:1,30:31:72.16:734,72,0	1/1:2,35:38:86.23:864,86,0	1/1:3,24:27:66.15:673,66,0	1/1:1,27:28:75.17:765,75,0	1/1:1,29:30:84.19:857,84,0	1/1:1,31:32:84.19:857,84,0	1/1:0,15:15:33.07:336,33,0
chr10	61433938	.	A	AATATAT	5092.53	PASS	AB=0.551;AC=33;AF=0.611;AN=54;BaseQRankSum=-3.152;DP=288;FS=1.423;HRun=0;HaplotypeScore=64.2695;InbreedingCoeff=0.6246;MQ=67.42;MQ0=0;MQRankSum=-7.732;QD=33.50;ReadPosRankSum=-1.380;VQSLOD=4.3630;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:63.22:0,63,1388	1/1:3,1:7:9.03:243,9,0	0/0:8,0:7:3.01:0,3,64	0/0:11,0:9:9.01:0,9,156	0/0:19,0:19:42.14:0,42,915	0/0:4,0:23:8.48:0,8,23	0/0:2,0:7:2.36:0,2,7	0/1:5,0:27:2.06:61,0,2	0/0:12,0:12:30.09:0,30,619	1/1:3,2:7:12.04:261,12,0	1/1:2,1:3:3.01:102,3,0	1/1:2,4:6:9.03:305,9,0	1/1:4,4:8:12.04:404,12,0	1/1:3,1:4:3.01:102,3,0	1/1:3,1:4:3.01:102,3,0	1/1:7,8:15:15.05:509,15,0	1/1:4,6:13:9.03:304,9,0	0/0:24,0:23:60.21:0,60,1269	1/1:7,10:18:41.84:1274,42,0	1/1:6,1:7:3.01:102,3,0	1/1:2,3:5:3.01:87,3,0	./.	0/0:1,0:5:1.41:0,1,4	0/0:2,0:3:0.89:0,1,2	1/1:3,3:7:9.03:305,9,0	1/1:2,4:7:15.05:445,15,0	1/1:5,6:11:9.03:305,9,0	1/1:1,1:3:6.02:181,6,0
chr10	61434155	.	G	GA	2014.86	PASS	AB=0.828;AC=19;AF=0.339;AN=56;BaseQRankSum=13.151;DP=541;FS=37.209;HRun=0;HaplotypeScore=113.6996;InbreedingCoeff=-0.4951;MQ=78.42;MQ0=0;MQRankSum=-11.554;QD=5.72;ReadPosRankSum=2.231;VQSLOD=1.7824;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:59.85:0,60,783	0/1:4,1:5:27.58:28,0,153	0/0:28,0:26:75.23:0,75,1000	0/0:29,0:28:78.17:0,78,961	0/0:27,0:27:81.25:0,81,1099	0/1:19,6:25:99:148,0,629	0/1:8,3:11:66.09:66,0,284	0/1:23,3:27:30.24:30,0,884	0/0:14,0:14:42.13:0,42,570	0/1:14,4:18:99:121,0,486	0/0:15,0:15:45.15:0,45,629	0/1:9,4:13:92.73:93,0,341	0/1:13,2:15:39.71:40,0,479	0/1:17,2:19:28.26:28,0,649	0/1:16,7:23:99:235,0,562	0/1:14,1:15:0.72:1,0,503	0/1:16,4:20:99:116,0,570	0/0:16,0:16:42.11:0,42,566	0/1:21,3:24:58.10:58,0,768	0/0:20,1:21:14.25:0,14,679	0/1:12,8:20:99:286,0,387	0/1:5,2:7:69.79:70,0,152	0/1:11,2:13:48.75:49,0,322	0/1:9,1:10:15.77:16,0,290	0/0:18,0:18:54.18:0,54,752	0/1:23,14:37:99:426,0,781	0/1:32,12:43:99:340,0,1077	0/1:5,1:6:24.77:25,0,192
chr10	61434234	.	T	TA	3632.92	PASS	AB=0.825;AC=19;AF=0.339;AN=56;BaseQRankSum=7.744;DP=575;FS=36.182;HRun=5;HaplotypeScore=121.4893;InbreedingCoeff=-0.5092;MQ=62.10;MQ0=0;MQRankSum=-11.571;QD=7.86;ReadPosRankSum=0.210;VQSLOD=-0.6827;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:57.14:0,57,612	0/0:10,0:10:27.07:0,27,290	0/0:6,0:6:15.04:0,15,161	0/0:9,0:9:27.06:0,27,283	0/0:22,0:22:66.17:0,66,708	0/1:22,4:26:82.66:83,0,602	0/1:14,3:17:36.76:37,0,345	0/1:43,42:82:99:1377,0,613	0/0:9,0:9:27.07:0,27,290	0/1:15,3:18:70.06:70,0,371	0/1:8,1:9:12.39:12,0,221	0/1:12,3:15:79.26:79,0,283	0/1:17,7:24:99:176,0,391	0/1:14,1:15:29.97:30,0,315	0/1:18,7:25:99:207,0,446	0/1:15,2:17:36.82:37,0,345	0/1:17,9:26:99:246,0,404	0/0:16,1:17:2.63:0,3,369	0/1:26,12:38:99:357,0,562	0/1:15,1:16:0.34:0,0,348	0/1:13,8:21:99:255,0,327	0/0:4,0:4:12.03:0,12,129	0/1:14,2:16:17.25:17,0,345	0/1:11,2:13:46.04:46,0,257	0/0:16,0:16:48.07:0,48,495	0/1:19,9:28:99:304,0,379	0/1:29,8:37:99:186,0,643	0/1:12,4:16:99:113,0,309
chr10	61434315	.	TTG	T	9059.65	PASS	AB=0.985;AC=41;AF=0.732;AN=56;BaseQRankSum=9.424;DP=597;FS=3.878;HRun=0;HaplotypeScore=143.1589;InbreedingCoeff=0.5245;MQ=56.04;MQ0=10;MQRankSum=-2.050;QD=19.65;ReadPosRankSum=0.222;VQSLOD=5.0905;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:46.35:0,46,665	1/1:4,1:5:11.99:129,12,0	0/1:26,0:12:6.66:7,0,132	0/0:29,0:14:6.60:0,7,55	0/0:31,2:33:9.99:0,10,1035	0/1:31,0:31:16.03:101,0,16	1/1:13,0:13:14.51:114,15,0	1/1:40,5:44:79.70:1074,80,0	0/0:18,2:20:19.81:0,20,720	1/1:19,3:22:12.45:635,12,0	1/1:22,1:23:56.79:586,57,0	1/1:12,0:12:36:411,36,0	1/1:13,0:13:32.93:375,33,0	1/1:15,1:16:29.82:318,30,0	1/1:22,0:22:59.96:669,60,0	1/1:12,0:12:18.05:211,18,0	0/1:11,1:12:10.46:64,0,10	0/0:28,0:28:10.96:0,11,638	1/1:19,2:20:34.52:425,35,0	1/1:32,0:32:87.16:1003,87,0	1/1:22,0:21:27.04:308,27,0	0/1:14,0:14:13.87:103,0,14	0/1:17,0:17:12.62:110,0,13	1/1:15,0:15:14.66:94,15,0	1/1:20,1:21:54.12:622,54,0	1/1:25,2:26:59.90:667,60,0	1/1:26,1:27:65.23:765,65,0	1/1:12,0:12:24.04:270,24,0
chr10	61434331	.	GTT	G	4970.30	PASS	AB=1.000;AC=41;AF=0.732;AN=56;BaseQRankSum=12.208;DP=682;FS=0.000;HRun=3;HaplotypeScore=181.1599;InbreedingCoeff=0.3704;MQ=51.84;MQ0=13;MQRankSum=-2.256;QD=8.57;ReadPosRankSum=-4.304;VQSLOD=-0.1914;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:37.85:0,38,777	1/1:7,0:7:8.01:34,8,0	0/1:27,0:12:2.94:3,0,190	0/0:24,0:6:6.64:0,7,59	0/0:34,0:34:61.69:0,62,1357	0/1:31,0:31:91.59:92,0,92	0/1:18,0:18:29.51:54,0,30	1/1:71,0:70:99:958,158,0	0/0:20,0:20:22.95:0,23,733	1/1:29,0:29:10.59:269,11,0	1/1:26,0:25:46.58:214,47,0	1/1:22,0:22:52.32:252,52,0	1/1:11,1:12:31.02:160,31,0	1/1:12,1:13:27:143,27,0	1/1:26,0:26:61.86:323,62,0	1/1:18,0:18:16.46:77,16,0	1/1:16,2:19:29.58:162,30,0	0/1:27,0:27:59.73:60,0,712	1/1:22,0:21:51.80:252,52,0	1/1:37,0:37:86.49:415,86,0	1/1:16,0:15:22.31:110,22,0	0/1:20,0:20:56.85:66,0,57	0/1:18,0:18:68.22:91,0,68	0/1:16,0:16:12.22:12,0,32	1/1:22,0:22:47.32:239,47,0	1/1:37,0:36:95.44:525,95,0	1/1:37,0:37:77.92:375,78,0	1/1:9,0:9:19.18:85,19,0
chr10	61434332	.	TTTG	T	5140.42	PASS	AB=0.821;AC=27;AF=0.482;AN=56;BaseQRankSum=6.193;DP=687;FS=13.318;HRun=0;HaplotypeScore=193.5363;InbreedingCoeff=0.4307;MQ=51.87;MQ0=13;MQRankSum=0.638;QD=11.98;ReadPosRankSum=9.265;VQSLOD=2.5249;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:62.22:0,62,1194	1/1:6,1:7:2.67:59,3,0	0/0:27,0:12:29.74:0,30,526	0/0:24,0:6:18.02:0,18,248	0/0:33,0:33:92.34:0,92,1970	0/0:32,0:32:77.21:0,77,1033	0/0:16,0:16:43.81:0,44,577	0/1:55,15:69:99:329,0,303	0/0:20,0:20:53.21:0,53,1048	0/1:22,7:29:99:275,0,179	1/1:14,12:25:42.92:437,43,0	0/1:15,7:22:18.38:255,0,18	1/1:6,6:12:1.86:297,2,0	1/1:8,6:14:22.86:259,23,0	1/1:14,13:27:38.78:492,39,0	1/1:15,3:18:11.50:130,12,0	0/1:21,0:21:30.81:31,0,92	0/0:27,0:27:63.53:0,64,1153	0/1:17,6:22:46.62:250,0,47	1/1:19,18:37:69.63:766,70,0	1/1:10,7:16:17.60:212,18,0	0/0:20,0:20:52.73:0,53,688	0/0:19,0:19:52.08:0,52,674	0/0:15,0:16:33.65:0,34,463	1/1:13,10:23:26.11:363,26,0	0/1:28,9:36:95.66:388,0,96	0/1:26,12:38:26.36:470,0,26	1/1:4,4:8:9.69:129,10,0
chr10	61434333	.	TTG	T	8284.90	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=4.364;DP=689;FS=2.584;HRun=0;HaplotypeScore=172.8552;InbreedingCoeff=0.9340;MQ=51.90;MQ0=13;MQRankSum=1.206;QD=19.36;ReadPosRankSum=0.590;VQSLOD=4.6636;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:19.53:0,20,735	1/1:3,4:7:6.02:74,6,0	0/0:25,0:12:21.94:0,22,299	0/0:23,0:6:14.76:0,15,126	0/0:33,1:34:52.44:0,52,1268	0/0:32,0:33:42.05:0,42,583	0/0:17,0:17:40.33:0,40,350	1/1:69,1:69:39.12:895,39,0	0/0:19,1:20:4.35:0,4,565	1/1:29,2:31:26.87:514,27,0	1/1:17,9:25:54.04:604,54,0	1/1:20,2:22:44.64:519,45,0	1/1:12,1:13:18.99:366,19,0	1/1:14,0:14:35.94:419,36,0	1/1:25,2:27:56.79:617,57,0	1/1:8,10:18:14.98:164,15,0	1/1:19,2:21:4.61:264,5,0	0/0:27,0:27:18.20:0,18,637	1/1:22,1:22:18.91:474,19,0	1/1:23,14:37:95.80:1024,96,0	1/1:17,0:16:24.03:272,24,0	0/0:20,0:20:45.38:0,45,405	0/0:20,0:20:34.82:0,35,404	0/0:15,0:16:28.62:0,29,282	1/1:14,8:22:39.10:449,39,0	1/1:33,4:36:63.58:767,64,0	1/1:23,14:37:58.12:699,58,0	1/1:6,0:6:14.99:165,15,0
chr10	61435419	.	AG	A	17478.56	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=12.305;DP=760;FS=0.000;HRun=1;HaplotypeScore=92.3112;InbreedingCoeff=0.9994;MQ=69.03;MQ0=0;MQRankSum=-1.028;QD=38.67;ReadPosRankSum=2.573;VQSLOD=5.2482;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,160,2437	1/1:0,13:13:33.07:439,33,0	0/0:34,0:34:96.29:0,96,1430	0/0:23,0:23:69.23:0,69,1046	0/0:35,0:35:99:0,105,1615	0/0:18,0:18:54.17:0,54,822	0/0:26,0:26:78.20:0,78,1191	1/1:1,35:36:99:1380,102,0	0/0:28,0:27:84.27:0,84,1292	1/1:0,28:28:81.26:1116,81,0	1/1:1,23:24:66.18:901,66,0	1/1:0,19:19:51.13:690,51,0	1/1:0,29:29:84.28:1174,84,0	1/1:0,38:38:99:1510,108,0	1/1:0,29:29:84.28:1174,84,0	1/1:0,30:30:84.28:1173,84,0	1/1:0,20:20:60.20:834,60,0	0/0:13,0:13:39.11:0,39,576	1/1:0,24:24:72.22:987,72,0	1/1:0,36:36:99:1466,108,0	1/1:0,36:36:99:1424,102,0	0/0:29,0:29:87.30:0,87,1361	0/0:21,0:21:57.19:0,57,889	0/0:28,0:28:84.21:0,84,1240	1/1:0,18:18:48.16:671,48,0	1/1:0,22:22:66.20:904,66,0	1/1:0,39:39:96.32:1342,96,0	1/1:0,11:11:21.07:293,21,0
chr10	61435936	.	C	CCAGTCAT	52921.85	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=6.267;DP=740;FS=2.462;HRun=0;HaplotypeScore=177.6734;InbreedingCoeff=0.9915;MQ=68.40;MQ0=1;MQRankSum=-16.998;QD=90.00;ReadPosRankSum=3.062;VQSLOD=5.9283;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,123,3003	1/1:3,6:11:24.08:946,24,0	0/0:28,0:28:78.18:0,78,1722	0/0:20,0:20:52.32:0,52,1106	0/0:27,0:27:81.28:0,81,2059	1/1:5,17:24:51.13:2052,51,0	1/1:12,15:27:75.26:2917,75,0	1/1:24,18:36:99:3766,102,0	0/0:20,0:20:57.20:0,57,1503	1/1:12,26:44:99:4262,123,0	1/1:6,22:29:66.23:2653,66,0	1/1:7,24:32:90.31:3470,90,0	1/1:11,17:31:69.24:2728,69,0	1/1:10,16:28:63.22:2530,63,0	1/1:14,17:32:69.24:2743,69,0	1/1:6,18:26:60.21:2376,60,0	1/1:4,7:14:30.10:1207,30,0	0/0:15,0:15:45.15:0,45,1175	1/1:5,10:17:45.14:1530,45,0	1/1:18,27:48:87.77:3441,88,0	1/1:5,8:16:20.64:844,21,0	1/1:6,32:38:99:3948,99,0	1/1:4,18:23:51.18:2050,51,0	1/1:6,10:16:21.07:844,21,0	1/1:7,21:29:63.22:2535,63,0	1/1:8,18:28:81.28:3094,81,0	1/1:7,19:26:63.22:2529,63,0	1/1:1,4:5:12.04:454,12,0
chr10	61437376	.	T	TA	448.65	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-4.183;DP=627;FS=3.586;HRun=7;HaplotypeScore=101.6165;InbreedingCoeff=0.9975;MQ=59.63;MQ0=1;MQRankSum=-0.855;QD=24.93;ReadPosRankSum=-4.509;VQSLOD=1.5754;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:49.63:0,50,467	0/0:12,0:11:30.02:0,30,282	0/0:19,0:19:35.08:0,35,322	0/0:18,0:15:30.70:0,31,270	0/0:37,0:37:96.15:0,96,927	0/0:21,0:21:57.09:0,57,549	0/0:11,0:11:30.05:0,30,290	1/1:3,15:18:45.14:544,45,0	0/0:13,0:13:30.04:0,30,290	0/0:33,0:31:72.10:0,72,695	0/0:22,0:22:60.10:0,60,579	0/0:22,0:22:60.09:0,60,579	0/0:31,0:31:87.14:0,87,839	0/0:19,0:19:57.08:0,57,545	0/0:29,0:29:78.12:0,78,753	0/0:19,0:19:54.06:0,54,515	0/0:35,0:35:93.14:0,93,898	0/0:25,0:25:55.29:0,55,517	0/0:19,0:18:51.08:0,51,492	0/0:26,0:26:66.10:0,66,637	0/0:13,0:13:33.03:0,33,312	0/0:19,0:19:54.09:0,54,521	0/0:25,0:25:66.09:0,66,631	0/0:14,0:14:39.06:0,39,377	0/0:29,0:29:81.12:0,81,782	0/0:27,0:26:69.11:0,69,666	0/0:34,0:33:87.14:0,87,840	0/0:19,0:19:51.04:0,51,479
chr10	61437602	.	AC	A	14613.08	PASS	AB=0.809;AC=54;AF=0.964;AN=56;BaseQRankSum=-2.242;DP=518;FS=3.018;HRun=3;HaplotypeScore=94.2156;InbreedingCoeff=-0.0223;MQ=50.72;MQ0=5;MQRankSum=-2.419;QD=28.21;ReadPosRankSum=2.107;VQSLOD=4.1948;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,18:19:39.05:464,39,0	1/1:0,5:4:12.04:149,12,0	0/1:14,4:2:24.26:24,0,30	0/1:6,2:4:17.40:17,0,22	1/1:2,30:32:81.21:981,81,0	1/1:0,33:33:72.23:892,72,0	1/1:0,7:7:9.03:111,9,0	1/1:3,23:19:48.12:575,48,0	1/1:0,23:23:60.19:743,60,0	1/1:0,24:22:63.20:781,63,0	1/1:0,15:14:39.12:479,39,0	1/1:2,15:16:45.14:557,45,0	1/1:3,28:29:78.24:964,78,0	1/1:1,16:16:45.13:545,45,0	1/1:3,23:24:69.20:842,69,0	1/1:1,21:21:60.19:743,60,0	1/1:1,7:8:21.07:260,21,0	1/1:1,13:14:36.11:446,36,0	1/1:4,9:12:27.08:333,27,0	1/1:2,23:24:66.19:804,66,0	1/1:0,6:5:12.04:148,12,0	1/1:0,12:12:30.09:371,30,0	1/1:1,19:20:45.14:557,45,0	1/1:1,10:11:24.07:297,24,0	1/1:2,15:16:36.11:445,36,0	1/1:5,17:17:42.09:501,42,0	1/1:6,33:37:99:1285,105,0	1/1:0,8:8:24.08:297,24,0
chr10	61437651	.	TAC	T	11646.30	PASS	AB=0.563;AC=33;AF=0.589;AN=56;BaseQRankSum=8.594;DP=527;FS=3.044;HRun=0;HaplotypeScore=105.4598;InbreedingCoeff=0.8859;MQ=46.33;MQ0=5;MQRankSum=-6.955;QD=37.45;ReadPosRankSum=1.762;VQSLOD=7.0998;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:48.02:0,48,1071	1/1:0,2:1:3.01:46,3,0	0/0:19,0:7:21.07:0,21,405	0/0:16,0:9:27.09:0,27,507	0/0:21,0:21:60.17:0,60,1121	0/0:33,0:33:90.31:0,90,1730	0/0:13,0:13:36.12:0,36,694	1/1:3,23:19:6.75:605,7,0	0/0:20,0:20:60.21:0,60,1156	1/1:1,23:22:66.22:1009,66,0	1/1:0,11:10:27.09:413,27,0	1/1:0,16:15:45.15:689,45,0	1/1:3,28:29:84.29:1285,84,0	1/1:0,20:20:57.19:872,57,0	1/1:1,16:15:42.14:643,42,0	1/1:1,22:23:63.21:946,63,0	1/1:2,9:11:27.09:413,27,0	0/0:13,0:13:36.12:0,36,695	1/1:1,20:19:51.16:758,51,0	1/1:1,18:18:54.18:825,54,0	1/1:1,7:7:15.05:229,15,0	0/0:20,0:20:57.19:0,57,1064	0/0:27,0:27:72.24:0,72,1325	0/0:9,0:9:24.08:0,24,463	1/1:1,21:21:60.20:918,60,0	1/1:3,18:17:45.15:688,45,0	1/1:1,29:28:69.23:1056,69,0	0/1:2,7:9:50.72:252,0,51
chr10	61438582	.	GA	G	8233.75	PASS	AC=46;AF=0.958;AN=48;BaseQRankSum=-1.674;DP=318;FS=5.373;HRun=2;HaplotypeScore=73.8130;InbreedingCoeff=0.5270;MQ=41.30;MQ0=7;MQRankSum=-2.977;QD=27.26;ReadPosRankSum=2.102;VQSLOD=4.4491;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,17:15:39.13:506,39,0	1/1:0,5:3:6.02:78,6,0	0/0:7,1:4:9.03:0,9,115	./.	1/1:1,20:21:48.16:622,48,0	1/1:0,12:12:26.98:345,27,0	./.	./.	1/1:0,9:8:15.05:195,15,0	1/1:0,19:19:57.19:739,57,0	1/1:0,20:19:48.16:621,48,0	1/1:2,5:5:12.04:155,12,0	1/1:0,9:7:15.05:187,15,0	1/1:1,11:8:12.04:155,12,0	1/1:1,13:8:18.06:233,18,0	1/1:0,4:3:9.03:117,9,0	1/1:0,5:4:12.04:156,12,0	1/1:0,7:6:15.05:195,15,0	1/1:0,1:1:3.01:39,3,0	1/1:0,27:27:54.17:692,54,0	./.	1/1:0,24:24:69.22:884,69,0	1/1:0,27:27:66.21:839,66,0	1/1:1,6:7:15.05:194,15,0	1/1:0,16:15:33.11:427,33,0	1/1:1,13:11:33.11:428,33,0	1/1:1,20:15:30.10:388,30,0	1/1:0,4:4:3.01:39,3,0
chr10	61439112	.	GA	G	7438.99	PASS	AC=48;AF=0.960;AN=50;BaseQRankSum=0.371;DP=399;FS=6.856;HRun=6;HaplotypeScore=41.5487;InbreedingCoeff=0.4753;MQ=29.53;MQ0=49;MQRankSum=-0.423;QD=19.84;ReadPosRankSum=0.799;VQSLOD=3.7222;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,7:11:12.03:129,12,0	1/1:2,4:6:12.03:128,12,0	0/0:10,0:1:3.01:0,3,37	./.	1/1:2,35:31:60.15:642,60,0	1/1:2,16:16:36.09:386,36,0	1/1:9,4:4:12.03:126,12,0	1/1:7,2:2:6.01:63,6,0	1/1:1,21:20:14.70:507,15,0	1/1:4,16:16:45.11:481,45,0	1/1:1,10:11:27.07:288,27,0	1/1:3,13:13:27.07:290,27,0	1/1:2,16:18:42.10:451,42,0	1/1:3,19:21:39.01:419,39,0	1/1:1,8:9:18.04:193,18,0	1/1:1,16:17:39.10:419,39,0	1/1:5,7:7:12.03:128,12,0	1/1:3,2:2:3.01:32,3,0	1/1:4,8:9:24.05:250,24,0	1/1:0,10:9:18.04:191,18,0	./.	1/1:1,15:15:36.09:385,36,0	1/1:0,24:19:36.09:386,36,0	1/1:2,5:7:9.02:97,9,0	1/1:0,9:7:15.04:161,15,0	1/1:1,19:18:48.12:515,48,0	1/1:6,24:27:72.18:773,72,0	./.
chr10	61440229	.	A	AG	49.33	PASS	AC=4;AF=1.00;AN=4;DP=23;FS=0.000;HRun=5;HaplotypeScore=6.1258;MQ=16.06;MQ0=11;QD=9.87;VQSLOD=-0.6602;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	1/1:0,2:2:6.02:74,6,0	./.	./.	1/1:2,1:3:3.01:39,3,0
chr10	61440250	.	CG	C	326.18	PASS	AC=14;AF=1.000;AN=14;DP=31;FS=0.000;HRun=3;HaplotypeScore=5.3237;MQ=21.63;MQ0=10;QD=18.12;VQSLOD=2.6783;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,3:1:3.01:37,3,0	./.	./.	./.	./.	1/1:0,3:2:6.02:74,6,0	./.	./.	./.	1/1:1,0:1:3:26,3,0	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	1/1:0,1:1:3.01:37,3,0	./.	./.	1/1:0,3:3:9.03:111,9,0	./.	1/1:0,3:2:3.01:37,3,0	1/1:0,3:3:6.02:74,6,0
chr10	61441414	.	GA	G	19978.28	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=8.927;DP=702;FS=7.373;HRun=1;HaplotypeScore=71.6275;InbreedingCoeff=0.9959;MQ=63.52;MQ0=12;MQRankSum=-0.852;QD=39.10;ReadPosRankSum=1.636;VQSLOD=5.4508;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:57:99:0,172,2681	1/1:0,7:7:21.07:294,21,0	0/0:31,0:20:60.20:0,60,904	0/0:23,0:15:45.15:0,45,694	0/0:28,0:28:81.28:0,81,1292	1/1:0,15:15:42.14:587,42,0	1/1:0,21:21:63.21:881,63,0	1/1:0,35:35:99:1445,105,0	0/0:26,0:26:78.27:0,78,1243	1/1:1,36:37:70.60:1463,71,0	1/1:0,19:19:57.19:797,57,0	1/1:0,20:20:54.18:755,54,0	1/1:0,22:22:66.22:916,66,0	1/1:0,20:20:57.19:797,57,0	1/1:0,28:28:81.27:1133,81,0	1/1:0,28:28:81.27:1133,81,0	1/1:0,28:28:81.27:1132,81,0	0/0:26,0:26:78.27:0,78,1236	1/1:2,16:16:45.15:630,45,0	1/1:0,29:29:78.26:1091,78,0	1/1:1,31:32:58.56:1107,59,0	1/1:0,14:14:36.12:504,36,0	1/1:1,18:18:51.17:713,51,0	1/1:0,31:31:84.28:1175,84,0	1/1:0,22:22:66.22:923,66,0	1/1:0,27:27:81.21:1076,81,0	1/1:1,30:30:87.29:1217,87,0	1/1:0,8:8:15.05:210,15,0
chr10	61441948	.	TA	T	310.67	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.104;DP=531;FS=6.773;HRun=8;HaplotypeScore=87.9734;InbreedingCoeff=0.9642;MQ=71.34;MQ0=0;MQRankSum=0.294;QD=18.27;ReadPosRankSum=0.139;VQSLOD=3.2212;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:48.15:0,48,578	0/0:16,0:16:42.07:0,42,480	0/0:14,0:14:29.10:0,29,352	0/0:14,0:14:26.37:0,26,317	0/0:29,0:29:81.10:0,81,921	0/0:22,0:22:57.17:0,57,687	0/0:7,0:7:15.05:0,15,181	0/0:28,0:28:75.18:0,75,870	1/1:1,16:16:42.07:406,42,0	0/0:29,0:29:78.23:0,78,933	0/0:21,0:21:60.14:0,60,705	0/0:17,0:17:48.15:0,48,578	0/0:26,0:25:75.15:0,75,873	0/0:19,0:19:51.16:0,51,614	0/0:23,0:23:60.13:0,60,696	0/0:28,0:28:75.15:0,75,872	0/0:18,0:18:51.11:0,51,598	0/0:5,0:5:15.05:0,15,180	0/0:18,0:18:48.11:0,48,564	0/0:26,0:26:66.16:0,66,781	0/0:17,0:17:48.13:0,48,563	0/0:13,0:13:30.09:0,30,362	0/0:13,0:13:39.08:0,39,453	0/0:9,0:9:27.08:0,27,322	0/0:20,0:20:57.17:0,57,688	0/0:29,0:29:81.23:0,81,964	0/0:29,0:29:69.21:0,69,833	0/0:8,0:8:24.07:0,24,290
chr10	61442015	.	A	ACAG	16414.93	PASS	AC=46;AF=0.852;AN=54;BaseQRankSum=8.470;DP=533;FS=1.947;HRun=0;HaplotypeScore=129.6509;InbreedingCoeff=0.9530;MQ=44.77;MQ0=28;MQRankSum=-8.636;QD=38.71;ReadPosRankSum=1.353;VQSLOD=6.0942;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:22:42.14:0,42,766	1/1:2,6:7:15.05:262,15,0	0/0:35,0:5:15.05:0,15,232	./.	0/0:29,0:29:69.24:0,69,1270	1/1:3,18:19:45.15:759,45,0	1/1:4,15:17:33.08:531,33,0	1/1:15,9:19:44.06:594,44,0	1/1:2,17:18:48.16:828,48,0	1/1:4,21:25:73.12:1237,73,0	1/1:5,11:16:36.11:581,36,0	1/1:4,14:18:52.96:816,53,0	1/1:2,17:18:54.17:892,54,0	1/1:5,17:20:54.01:849,54,0	1/1:2,26:29:84.25:1424,84,0	1/1:6,22:27:69.19:1132,69,0	1/1:2,7:9:24.07:398,24,0	0/0:8,0:6:15.05:0,15,279	1/1:7,13:18:46.54:763,47,0	1/1:4,23:20:42.14:697,42,0	1/1:3,10:12:18.06:315,18,0	1/1:2,11:14:39.12:635,39,0	1/1:1,14:15:45.14:722,45,0	1/1:1,5:6:6.02:99,6,0	1/1:4,17:19:46.42:741,46,0	1/1:2,22:22:62.80:1108,63,0	1/1:3,13:16:42.14:714,42,0	1/1:0,6:6:18.06:320,18,0
chr10	61442016	.	T	TC	8238	PASS	AB=0.660;AC=43;AF=0.796;AN=54;BaseQRankSum=11.482;DP=587;FS=7.277;HRun=0;HaplotypeScore=165.0390;InbreedingCoeff=0.6133;MQ=43.50;MQ0=28;MQRankSum=-8.861;QD=17.20;ReadPosRankSum=6.864;VQSLOD=5.7715;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:22:42.14:0,42,587	1/1:3,6:8:15:133,15,0	0/0:34,0:5:14.94:0,15,166	./.	0/0:29,0:29:69.23:0,69,965	1/1:9,18:25:45.61:402,46,0	1/1:8,15:21:25.50:259,25,0	0/1:17,9:21:36.70:334,0,37	1/1:3,17:19:29.98:419,30,0	1/1:7,21:28:42.89:652,43,0	1/1:7,11:18:12.09:223,12,0	0/1:6,14:20:12.04:299,0,12	1/1:7,17:23:42.90:459,43,0	1/1:7,17:22:26.19:446,26,0	1/1:7,27:33:69.64:713,70,0	1/1:8,22:29:41.79:557,42,0	1/1:3,7:10:24.01:230,24,0	0/0:8,0:6:15.05:0,15,210	0/1:11,13:22:22.12:382,0,22	1/1:7,25:20:17.56:307,18,0	1/1:4,10:13:15.59:155,16,0	1/1:2,12:14:21.89:287,22,0	1/1:3,14:17:28.62:319,29,0	1/1:3,5:8:3.65:43,4,0	1/1:7,18:21:44.09:429,44,0	1/1:4,22:24:48.34:607,48,0	1/1:3,13:19:47.74:417,48,0	1/1:0,6:6:18.01:165,18,0
chr10	61442101	.	G	GTTCT	1684.80	PASS	AC=10;AF=0.192;AN=52;BaseQRankSum=-2.262;DP=653;FS=0.000;HRun=0;HaplotypeScore=102.3651;InbreedingCoeff=0.9019;MQ=38.44;MQ0=103;MQRankSum=-1.851;QD=20.80;ReadPosRankSum=-1.573;VQSLOD=3.0984;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:34:63.15:0,63,1036	0/0:18,0:16:30.10:0,30,533	./.	./.	0/0:19,0:15:18.06:0,18,323	1/1:8,12:19:24.08:571,24,0	1/1:4,9:9:12.04:231,12,0	0/0:28,0:21:42.12:0,42,720	0/0:18,0:17:30.10:0,30,528	0/0:25,0:19:45.15:0,45,807	0/0:19,0:15:6.02:0,6,108	0/0:20,0:19:42.14:0,42,748	0/0:34,0:31:50.94:0,51,912	0/0:28,0:25:39.13:0,39,693	0/0:31,0:29:57.20:0,57,1024	0/0:31,0:27:51.17:0,51,916	0/0:14,0:11:15.05:0,15,270	0/0:13,0:9:15.05:0,15,270	0/0:16,0:10:21.07:0,21,377	0/0:42,0:36:81.28:0,81,1454	0/0:28,0:22:26.63:0,27,454	1/1:2,12:10:12.04:311,12,0	1/1:3,13:15:18.06:444,18,0	1/1:3,14:13:12.04:292,12,0	0/0:25,0:24:41.92:0,42,754	0/0:30,0:24:60.16:0,60,1044	0/0:34,0:28:50.98:0,51,876	0/0:6,0:2:3.01:0,3,54
chr10	61442629	.	TGAC	T	19336.35	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=13.844;DP=756;FS=14.327;HRun=0;HaplotypeScore=110.1820;InbreedingCoeff=0.9998;MQ=84.00;MQ0=0;MQRankSum=-5.297;QD=40.54;ReadPosRankSum=3.885;VQSLOD=5.5727;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:62,0:62:99:0,183,3961	1/1:0,15:15:42.14:715,42,0	0/0:32,0:31:83.50:0,83,1685	0/0:23,0:23:31.31:0,31,1014	0/0:32,0:32:96.31:0,96,2112	0/0:13,0:13:39.13:0,39,836	0/0:27,0:27:78.25:0,78,1751	1/1:2,36:34:96.27:1505,96,0	1/1:0,28:28:71.71:1225,72,0	1/1:0,20:20:60.19:997,60,0	1/1:0,12:12:33.11:562,33,0	1/1:1,22:22:57.19:953,57,0	1/1:2,29:29:75.26:1250,75,0	1/1:0,27:25:63.21:1045,63,0	1/1:0,44:42:99:1776,105,0	1/1:0,33:30:54.18:920,54,0	1/1:2,29:31:78.27:1328,78,0	0/0:18,0:18:54.19:0,54,1243	1/1:0,20:19:57.17:916,57,0	1/1:1,24:25:66.23:1123,66,0	1/1:3,35:38:81.28:1380,81,0	0/0:29,0:29:84.24:0,84,1770	0/0:20,0:20:54.12:0,54,1145	0/0:23,0:23:63.20:0,63,1401	1/1:1,24:25:54.18:920,54,0	1/1:1,24:24:69.18:1087,69,0	1/1:0,31:27:66.23:1124,66,0	1/1:0,11:10:30.10:511,30,0
chr10	61444570	.	CTGTGGCCCCAATG	C	1105.47	PASS	AC=10;AF=0.185;AN=54;BaseQRankSum=4.865;DP=654;FS=8.638;HRun=0;HaplotypeScore=160.4248;InbreedingCoeff=0.8064;MQ=42.68;MQ0=101;MQRankSum=-4.970;QD=25.12;ReadPosRankSum=-2.032;VQSLOD=1.9109;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:51:99:0,114,7063	0/0:12,0:12:33.11:0,33,1879	0/0:24,0:1:3.01:0,3,124	./.	0/0:27,0:24:54.18:0,54,3153	1/1:0,4:1:3.01:121,3,0	1/1:4,8:3:3.01:110,3,0	0/0:34,0:21:51.14:0,51,2684	0/0:24,0:22:54.19:0,54,3299	0/0:21,0:14:42.13:0,42,2529	0/0:21,0:16:18.06:0,18,1191	0/0:29,0:25:63.22:0,63,3999	0/0:29,0:26:66.23:0,66,3879	0/0:28,0:25:60.02:0,60,3600	0/0:30,0:26:66.23:0,66,3872	0/0:28,0:22:51.18:0,51,3008	0/0:47,0:42:99:0,105,6297	0/0:24,0:19:45.15:0,45,2557	0/0:22,0:14:39.13:0,39,2326	0/0:19,0:17:42.14:0,42,2570	0/0:43,0:35:90.27:0,90,5279	1/1:1,4:5:9.03:330,9,0	1/1:1,5:6:15.05:570,15,0	1/1:7,10:7:3.48:117,3,0	0/0:17,0:14:28.33:0,28,1665	0/0:24,0:20:57.20:0,57,3412	0/0:21,0:21:54.19:0,54,3376	0/0:7,0:6:18.06:0,18,1119
chr10	61444609	.	TC	T	409.64	PASS	AC=2;AF=0.038;AN=52;BaseQRankSum=3.145;DP=701;FS=5.687;HRun=4;HaplotypeScore=50.2607;InbreedingCoeff=0.7170;MQ=40.35;MQ0=170;MQRankSum=0.222;QD=15.76;ReadPosRankSum=2.140;VQSLOD=2.5675;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:68,0:59:99:0,111,1467	0/0:5,0:5:9.03:0,9,126	0/0:40,0:2:6.02:0,6,84	./.	0/0:21,0:16:30.10:0,30,419	0/0:15,0:9:9.01:0,9,108	0/0:20,0:5:6.02:0,6,80	0/0:27,0:7:18.02:0,18,213	1/1:1,25:24:42.13:504,42,0	0/0:21,0:10:30.10:0,30,420	0/0:20,0:15:21.07:0,21,293	0/0:30,0:27:45.15:0,45,628	0/0:21,0:17:15.05:0,15,209	0/0:22,0:17:30.10:0,30,419	0/0:28,0:20:42.14:0,42,587	0/0:26,0:19:24.07:0,24,316	0/0:47,0:40:51.08:0,51,668	0/0:32,0:25:39.12:0,39,528	0/0:23,0:8:24.08:0,24,336	0/0:14,0:11:21.06:0,21,272	0/0:51,0:31:66.22:0,66,923	0/0:9,0:7:17.97:0,18,211	0/0:15,0:14:27.02:0,27,353	0/0:25,0:12:18.06:0,18,250	0/0:15,0:12:24.08:0,24,329	0/0:26,0:20:57.18:0,57,781	0/0:15,0:14:33.11:0,33,461	./.
chr10	61445421	.	TTA	T	11396.92	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=13.615;DP=538;FS=3.319;HRun=0;HaplotypeScore=90.1313;InbreedingCoeff=0.9695;MQ=82.05;MQ0=0;MQRankSum=-1.500;QD=37.86;ReadPosRankSum=5.298;VQSLOD=7.2188;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:24.08:0,24,438	1/1:0,13:13:39.09:536,39,0	0/0:22,0:22:56.97:0,57,912	0/0:15,0:15:39.08:0,39,618	0/0:24,0:24:69.24:0,69,1253	0/0:21,0:21:60.21:0,60,1098	0/0:16,0:16:48.15:0,48,849	0/0:28,0:28:78.25:0,78,1364	0/0:16,0:16:48.13:0,48,817	1/1:2,24:26:72.23:1013,72,0	1/1:0,23:23:69.23:988,69,0	1/1:1,25:26:72.24:1031,72,0	1/1:1,24:25:69.23:987,69,0	1/1:0,15:15:42.14:602,42,0	1/1:0,12:12:36.12:516,36,0	1/1:1,20:21:45.15:645,45,0	1/1:0,6:6:15.05:215,15,0	0/0:18,0:18:42.14:0,42,756	1/1:1,24:25:69.23:984,69,0	1/1:1,33:34:96.20:1303,96,0	1/1:0,21:21:57.19:817,57,0	0/0:16,0:16:45.15:0,45,816	0/0:21,0:21:63.20:0,63,1123	0/0:8,0:8:12.04:0,12,220	1/1:3,16:19:36.12:515,36,0	0/0:22,0:22:66.23:0,66,1209	1/1:0,35:35:87.29:1246,87,0	0/0:1,0:1:3.01:0,3,55
chr10	61446247	.	GT	G	333.69	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.729;DP=643;FS=3.723;HRun=7;HaplotypeScore=62.3145;InbreedingCoeff=0.9956;MQ=80.02;MQ0=0;MQRankSum=-1.492;QD=18.54;ReadPosRankSum=1.548;VQSLOD=3.5054;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:96.31:0,96,1208	0/0:11,0:11:33.08:0,33,400	0/0:23,0:23:54.06:0,54,604	0/0:22,0:22:39:0,39,503	0/0:18,0:18:54.15:0,54,653	0/0:26,0:26:72.21:0,72,880	0/0:27,0:27:75.24:0,75,944	0/0:27,0:27:66.20:0,66,808	1/1:2,16:18:42.09:429,42,0	0/0:26,0:26:75.24:0,75,944	0/0:23,0:23:69.17:0,69,840	0/0:30,0:30:90.24:0,90,1103	0/0:32,0:32:93.28:0,93,1144	0/0:26,0:26:78.25:0,78,981	0/0:19,0:19:54.17:0,54,676	0/0:17,0:17:51.16:0,51,634	0/0:16,0:16:42.13:0,42,528	0/0:8,0:8:24.08:0,24,300	0/0:27,0:27:66.20:0,66,819	0/0:29,0:29:81.20:0,81,956	0/0:25,0:25:69.20:0,69,845	0/0:22,0:22:60.17:0,60,731	0/0:20,0:20:54.17:0,54,679	0/0:25,0:25:72.23:0,72,906	0/0:23,0:23:66.19:0,66,807	0/0:18,0:18:48.15:0,48,593	0/0:38,0:38:99:0,102,1271	0/0:10,0:10:24.05:0,24,285
chr10	61448941	.	GC	G	5352.97	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=12.526;DP=670;FS=0.344;HRun=2;HaplotypeScore=109.8257;InbreedingCoeff=0.9999;MQ=89.78;MQ0=0;MQRankSum=0.402;QD=37.70;ReadPosRankSum=2.181;VQSLOD=4.7111;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,99,1471	0/0:13,0:13:39.13:0,39,582	0/0:31,0:31:93.21:0,93,1341	0/0:21,0:21:60.16:0,60,819	0/0:29,0:29:84.28:0,84,1256	1/1:0,25:25:72.17:914,72,0	1/1:0,16:16:48.16:623,48,0	0/0:25,0:25:72.24:0,72,1061	1/1:0,25:25:72.23:935,72,0	0/0:34,0:34:99:0,102,1525	0/0:23,0:23:69.22:0,69,1013	0/0:14,0:14:42.14:0,42,629	0/0:34,0:34:99:0,102,1504	0/0:18,0:18:51.15:0,51,727	0/0:23,0:23:69.16:0,69,969	0/0:20,0:20:60.20:0,60,898	0/0:22,0:22:66.22:0,66,989	0/0:22,0:22:66.22:0,66,986	0/0:16,0:16:45.13:0,45,647	0/0:18,0:18:54.17:0,54,788	0/0:33,0:33:93.30:0,93,1372	1/1:0,24:24:72.23:935,72,0	1/1:0,31:31:90.29:1168,90,0	1/1:1,20:21:60.20:779,60,0	0/0:39,0:39:99:0,114,1709	0/0:16,0:16:48.16:0,48,719	0/0:31,0:30:93.31:0,93,1390	0/0:12,0:12:36.12:0,36,532
chr10	61449979	.	T	TA	3473.94	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=14.541;DP=642;FS=0.000;HRun=0;HaplotypeScore=132.4522;InbreedingCoeff=0.9645;MQ=82.10;MQ0=0;MQRankSum=-9.358;QD=34.74;ReadPosRankSum=-1.118;VQSLOD=2.7352;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:51:99:0,150,2075	0/0:9,0:9:24.08:0,24,336	0/0:27,0:27:75.24:0,75,1032	0/0:23,0:23:55.64:0,56,708	0/0:32,0:32:96.32:0,96,1342	1/1:0,18:18:51.17:692,51,0	1/1:0,9:9:27.09:363,27,0	0/0:27,0:27:81.25:0,81,1099	1/1:0,21:21:57.18:751,57,0	0/0:28,0:28:81.27:0,81,1132	0/0:18,0:18:54.18:0,54,748	0/0:29,0:29:84.26:0,84,1141	0/0:23,0:23:69.19:0,69,926	0/0:23,0:23:69.23:0,69,965	0/0:28,0:28:81.27:0,81,1130	0/0:25,0:25:75.25:0,75,1048	0/0:22,0:22:66.19:0,66,902	0/0:9,0:9:27.09:0,27,378	0/0:18,0:18:51.16:0,51,693	0/0:30,0:30:90.30:0,90,1258	0/0:40,0:40:99:0,120,1655	1/1:2,16:18:46.96:626,47,0	1/1:4,14:18:42.10:548,42,0	1/1:1,15:16:33.64:494,34,0	0/0:25,0:25:75.24:0,75,1032	0/0:20,0:20:60.20:0,60,839	0/0:33,0:33:96.30:0,96,1325	0/0:1,0:1:3.01:0,3,42
chr10	61450800	.	C	CT	12934.16	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=10.777;DP=648;FS=4.530;HRun=6;HaplotypeScore=130.1519;InbreedingCoeff=0.9885;MQ=73.59;MQ0=0;MQRankSum=-12.731;QD=32.74;ReadPosRankSum=-0.796;VQSLOD=2.6881;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,138,1408	1/1:0,12:12:33.11:415,33,0	0/0:25,0:25:60.08:0,60,589	0/0:9,0:9:14.88:0,15,202	0/0:32,0:32:93.21:0,93,944	0/0:26,0:26:69.15:0,69,704	0/0:12,0:12:36.08:0,36,367	1/1:6,26:32:84.26:1045,84,0	0/0:22,0:22:57.13:0,57,581	1/1:3,16:19:51.16:641,51,0	1/1:0,20:20:54.09:643,54,0	1/1:3,22:25:66.09:777,66,0	1/1:2,27:29:84.27:1055,84,0	1/1:2,28:30:86.98:1032,87,0	1/1:5,34:39:99:1378,111,0	1/1:3,24:27:72.20:888,72,0	1/1:3,10:13:30.10:377,30,0	0/0:9,0:9:21.04:0,21,214	1/1:8,11:19:45.09:524,45,0	1/1:3,19:22:57.14:699,57,0	1/1:1,14:15:30.10:377,30,0	0/0:28,0:28:84.19:0,84,856	0/0:22,0:22:66.14:0,66,667	0/0:19,0:19:42.09:0,42,429	1/1:3,18:20:54.09:638,54,0	1/1:3,30:33:93.26:1152,93,0	1/1:6,29:34:96.29:1192,96,0	1/1:2,2:4:9.02:100,9,0
chr10	61450828	.	TGG	T	14930.10	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=18.996;DP=638;FS=3.486;HRun=4;HaplotypeScore=147.6396;InbreedingCoeff=0.9963;MQ=80.60;MQ0=0;MQRankSum=-14.897;QD=37.61;ReadPosRankSum=0.974;VQSLOD=3.6841;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,141,2512	1/1:1,12:13:39.12:552,39,0	0/0:26,0:26:71.95:0,72,1142	0/0:21,0:19:57.20:0,57,1043	0/0:27,0:27:81.25:0,81,1409	0/0:28,0:28:84.26:0,84,1482	0/0:20,0:20:57.18:0,57,1009	1/1:6,23:29:75.16:973,75,0	1/1:1,20:21:48.16:706,48,0	1/1:2,17:19:57.11:788,57,0	1/1:2,17:19:54.15:742,54,0	1/1:0,25:25:75.25:1098,75,0	1/1:1,27:28:78.23:1103,78,0	1/1:1,30:31:90.28:1279,90,0	1/1:1,32:33:93.29:1322,93,0	1/1:2,25:27:69.14:961,69,0	1/1:1,17:18:39.08:532,39,0	0/0:9,0:9:27.09:0,27,506	1/1:3,14:17:45.10:619,45,0	1/1:2,22:24:63.20:904,63,0	1/1:2,8:10:18.03:218,18,0	0/0:29,0:29:87.29:0,87,1587	0/0:19,0:19:54.16:0,54,948	0/0:15,0:15:45.15:0,45,843	1/1:2,20:22:54.11:747,54,0	1/1:5,24:29:81.21:1131,81,0	1/1:4,23:27:72.23:1035,72,0	1/1:0,5:5:15.05:221,15,0
chr10	61451122	.	G	GA	2314.86	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-9.690;DP=545;FS=1.597;HRun=4;HaplotypeScore=135.0591;InbreedingCoeff=0.9730;MQ=82.63;MQ0=0;MQRankSum=-1.530;QD=33.07;ReadPosRankSum=0.677;VQSLOD=2.1613;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,25:29:38.38:889,38,0	0/0:10,0:10:22.45:0,22,151	0/0:20,0:20:38.69:0,39,511	0/0:31,0:30:75.16:0,75,813	1/1:1,24:25:72.15:941,72,0	0/0:20,0:20:57.13:0,57,626	0/0:26,0:26:70.75:0,71,786	0/0:29,0:29:40.03:0,40,301	0/0:24,0:24:63.35:0,63,336	0/0:14,0:14:38.17:0,38,250	0/0:16,0:16:38.49:0,38,278	0/0:19,0:19:42.11:0,42,241	0/0:18,0:18:52.25:0,52,297	0/0:13,0:13:24.43:0,24,154	0/0:26,0:26:60.61:0,61,342	0/0:16,0:16:43.06:0,43,226	0/0:24,0:24:55.57:0,56,329	1/1:2,14:16:47.89:628,48,0	0/0:10,0:10:25.97:0,26,147	0/0:24,0:24:55.49:0,55,343	0/0:8,0:8:17.63:0,18,117	0/0:19,0:19:54.15:0,54,612	0/0:24,0:24:60.09:0,60,645	0/0:27,0:27:78.21:0,78,874	0/0:15,0:15:37.97:0,38,237	0/0:14,0:14:34.50:0,34,186	0/0:24,0:24:56.30:0,56,323	0/0:4,0:4:8.75:0,9,52
chr10	61451143	.	C	CA	8180.07	PASS	AC=34;AF=0.630;AN=54;BaseQRankSum=12.549;DP=523;FS=1.146;HRun=6;HaplotypeScore=118.1137;InbreedingCoeff=0.9952;MQ=84.38;MQ0=0;MQRankSum=-6.845;QD=28.80;ReadPosRankSum=-0.146;VQSLOD=3.7090;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:78.17:0,78,796	1/1:2,4:6:15.01:171,15,0	0/0:22,0:22:44.56:0,45,428	0/0:29,0:28:51.64:0,52,580	0/0:26,0:26:71.37:0,71,711	0/0:23,0:23:48.10:0,48,490	0/0:26,0:26:72.14:0,72,727	1/1:6,27:33:78.21:949,78,0	1/1:1,20:21:57.18:717,57,0	1/1:4,7:11:27.07:324,27,0	1/1:1,10:11:30.05:359,30,0	1/1:7,11:18:39.01:437,39,0	1/1:3,17:20:42.05:492,42,0	1/1:2,14:16:21.02:246,21,0	1/1:1,22:23:57.15:700,57,0	1/1:3,14:17:39.09:473,39,0	1/1:5,14:19:45.13:552,45,0	0/0:13,0:13:36.08:0,36,367	1/1:3,13:16:36.11:441,36,0	1/1:5,12:17:39.08:473,39,0	1/1:2,5:7:18.06:225,18,0	0/0:19,0:19:48.11:0,48,489	0/0:23,0:23:63.13:0,63,636	0/0:26,0:26:69.09:0,69,685	1/1:2,9:11:27.09:339,27,0	1/1:2,13:15:36.12:453,36,0	1/1:1,22:23:66.21:830,66,0	./.
chr10	61451180	.	T	TG	8200.16	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=14.292;DP=579;FS=12.739;HRun=5;HaplotypeScore=131.1371;InbreedingCoeff=0.9909;MQ=90.04;MQ0=0;MQRankSum=-8.842;QD=31.18;ReadPosRankSum=2.138;VQSLOD=3.0711;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:69.16:0,69,737	1/1:1,5:6:15.05:197,15,0	0/0:27,0:27:49.61:0,50,562	0/0:33,0:31:66.70:0,67,655	0/0:24,0:24:66.08:0,66,693	0/0:25,0:25:75.06:0,75,770	0/0:22,0:22:63.16:0,63,677	0/0:41,0:41:99:0,102,1084	0/0:23,0:23:63.16:0,63,676	1/1:2,9:11:24.08:315,24,0	1/1:3,8:11:18.06:236,18,0	1/1:2,22:24:69.22:894,69,0	1/1:4,17:21:45.15:591,45,0	1/1:3,18:21:48.12:589,48,0	1/1:4,20:24:51.15:655,51,0	1/1:2,15:17:39.13:512,39,0	1/1:3,12:15:39.13:511,39,0	0/0:16,0:16:42:0,42,450	1/1:3,17:20:48.13:602,48,0	1/1:4,12:16:39.13:512,39,0	1/1:2,7:9:18.06:237,18,0	0/0:24,0:24:60.15:0,60,644	0/0:26,0:26:69.17:0,69,740	0/0:24,0:24:57.14:0,57,612	1/1:2,19:21:48.16:631,48,0	1/1:1,19:20:54.16:695,54,0	1/1:1,22:23:66.21:865,66,0	1/1:0,4:4:12.04:158,12,0
chr10	61451432	.	TG	T	1313.67	PASS	AB=0.505;AC=41;AF=0.788;AN=52;BaseQRankSum=1.417;DP=168;FS=20.205;HRun=3;HaplotypeScore=129.2592;InbreedingCoeff=0.3514;MQ=34.14;MQ0=0;MQRankSum=0.261;QD=8.64;ReadPosRankSum=0.482;VQSLOD=0.0800;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:1,9:10:0.08:0,0,0	1/1:0,7:7:5.98:57,6,0	1/1:1,0:1:2.60:10,3,0	./.	0/1:0,7:7:0:0,0,0	1/1:0,5:5:6.02:74,6,0	0/0:0,5:5:1.35:0,1,3	1/1:1,6:6:12.42:181,12,0	0/0:0,4:4:0:0,0,0	1/1:1,7:8:14.07:154,14,0	0/1:0,6:6:0.38:0,0,0	1/1:0,2:2:0.47:1,0,0	1/1:0,7:7:0.16:1,0,0	0/1:0,10:10:0:0,0,0	0/0:0,7:7:0.88:0,1,2	1/1:0,6:6:3.01:37,3,0	1/1:0,6:6:5.57:73,6,0	1/1:0,7:7:18.01:205,18,0	1/1:0,2:2:6.02:74,6,0	1/1:0,4:4:5.65:31,6,0	./.	1/1:0,11:11:1.98:10,2,0	0/1:0,9:9:0.19:6,0,0	1/1:0,5:4:0.40:1,0,0	1/1:0,11:11:2.29:10,2,0	1/1:1,8:9:21.02:259,21,0	1/1:0,9:9:8.88:94,9,0	1/1:0,3:3:9.03:111,9,0
chr10	61451441	.	TA	T	5766.23	PASS	AC=52;AF=0.963;AN=54;BaseQRankSum=-0.592;DP=194;FS=7.279;HRun=2;HaplotypeScore=121.3787;InbreedingCoeff=0.3954;MQ=32.92;MQ0=0;MQRankSum=-1.732;QD=29.88;ReadPosRankSum=0.592;VQSLOD=3.7998;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,14:11:27.09:347,27,0	1/1:0,8:8:21.07:272,21,0	0/0:1,0:1:2.80:0,3,13	./.	1/1:0,9:7:15.05:193,15,0	1/1:6,0:6:15.05:191,15,0	1/1:5,0:5:15.04:176,15,0	1/1:1,6:6:16.87:199,17,0	1/1:0,4:4:12.04:151,12,0	1/1:1,8:9:17.97:210,18,0	1/1:0,8:8:15.05:193,15,0	1/1:0,4:4:12.04:155,12,0	1/1:0,9:9:18.06:229,18,0	1/1:0,10:10:27.09:347,27,0	1/1:0,7:7:21.07:267,21,0	1/1:0,6:6:18.06:233,18,0	1/1:0,7:7:21.07:268,21,0	1/1:0,7:7:21.07:272,21,0	1/1:0,2:2:6.02:78,6,0	1/1:0,6:6:15.01:175,15,0	1/1:0,2:2:3.01:36,3,0	1/1:10,1:11:33.08:392,33,0	1/1:9,1:10:24.05:285,24,0	1/1:5,0:4:2.91:22,3,0	1/1:0,13:13:24.07:299,24,0	1/1:0,12:12:30.10:389,30,0	1/1:0,9:9:21.07:271,21,0	1/1:0,3:3:9.03:117,9,0
chr10	61451442	.	A	AG	2447.99	PASS	AC=52;AF=0.963;AN=54;BaseQRankSum=0.022;DP=208;FS=7.533;HRun=0;HaplotypeScore=142.3247;InbreedingCoeff=0.3770;MQ=32.49;MQ0=0;MQRankSum=-1.732;QD=11.83;ReadPosRankSum=0.466;VQSLOD=3.8144;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:11:26.59:169,27,0	1/1:8,0:8:17.93:77,18,0	0/0:1,0:1:2.37:0,2,8	./.	1/1:9,0:7:14.78:94,15,0	1/1:0,6:6:15.05:185,15,0	1/1:0,5:5:15.04:168,15,0	1/1:7,0:6:14.88:76,15,0	1/1:4,0:4:10.16:38,10,0	1/1:10,0:10:14.84:66,15,0	1/1:9,0:9:14:67,14,0	1/1:4,0:4:10.49:42,10,0	1/1:9,0:9:15.57:64,16,0	1/1:12,0:12:23.33:91,23,0	1/1:8,0:8:18.44:77,18,0	1/1:6,0:6:15.74:62,16,0	1/1:8,0:8:20.47:78,20,0	1/1:7,0:7:20.69:133,21,0	1/1:3,0:3:5.68:27,6,0	1/1:8,0:8:11.02:44,11,0	1/1:3,0:3:2.84:9,3,0	1/1:1,10:11:33.05:370,33,0	1/1:1,9:10:24:248,24,0	1/1:0,5:4:2.98:22,3,0	1/1:13,0:13:20.68:85,21,0	1/1:14,0:14:25.63:119,26,0	1/1:9,0:9:18.99:83,19,0	1/1:4,0:4:8.38:38,8,0
chr10	61451445	.	AGCC	A	1468.41	PASS	AB=1.000;AC=43;AF=0.796;AN=54;BaseQRankSum=0.449;DP=208;FS=7.203;HRun=0;HaplotypeScore=151.2709;InbreedingCoeff=0.3452;MQ=32.49;MQ0=0;MQRankSum=-0.725;QD=7.73;ReadPosRankSum=1.515;VQSLOD=2.1877;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:11:22.37:83,22,0	1/1:8,0:8:0.98:4,1,0	1/1:1,0:1:2.50:9,2,0	./.	1/1:9,0:7:13.11:55,13,0	1/1:0,6:6:15.05:225,15,0	1/1:0,5:5:15.05:220,15,0	0/1:7,0:6:6.76:7,0,18	0/1:4,0:4:0:1,0,0	1/1:10,0:10:10.39:44,10,0	1/1:9,0:9:6.06:16,6,0	0/0:4,0:4:0.40:0,0,1	1/1:9,0:9:3.46:10,3,0	0/1:12,0:12:1.15:1,0,2	1/1:8,0:8:2.47:7,2,0	1/1:6,0:6:1:4,1,0	0/0:8,0:8:2.85:0,3,28	1/1:7,0:7:14.04:42,14,0	0/0:3,0:3:1.06:0,1,23	1/1:8,0:8:1.40:3,1,0	0/0:3,0:3:0.41:0,0,1	1/1:1,10:11:33.10:463,33,0	1/1:1,9:10:24.06:313,24,0	1/1:0,5:4:2.99:26,3,0	1/1:13,0:13:5.07:13,5,0	1/1:14,0:14:0.67:12,1,0	1/1:9,0:9:5.28:13,5,0	1/1:4,0:4:2.23:5,2,0
chr10	61451446	.	GC	G	4657.04	PASS	AC=52;AF=0.963;AN=54;BaseQRankSum=-0.197;DP=208;FS=7.515;HRun=4;HaplotypeScore=133.4157;InbreedingCoeff=0.4061;MQ=32.49;MQ0=0;MQRankSum=-1.732;QD=22.50;ReadPosRankSum=0.066;VQSLOD=3.2964;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,15:11:27.08:321,27,0	1/1:0,8:8:20.99:193,21,0	0/0:1,0:1:2.68:0,3,11	./.	1/1:0,9:7:15.05:179,15,0	1/1:6,0:6:15.05:177,15,0	1/1:5,0:5:15.03:162,15,0	1/1:0,7:6:18.04:189,18,0	1/1:0,4:4:12:105,12,0	1/1:0,10:10:17.77:159,18,0	1/1:0,9:9:15.02:150,15,0	1/1:0,4:4:12:108,12,0	1/1:0,9:9:18.01:165,18,0	1/1:0,12:12:27.01:238,27,0	1/1:0,8:8:21.01:193,21,0	1/1:0,6:6:18.01:162,18,0	1/1:0,8:8:24:211,24,0	1/1:0,7:7:21.06:251,21,0	1/1:0,3:3:9.02:90,9,0	1/1:0,8:8:14.81:122,15,0	1/1:0,3:3:2.99:24,3,0	1/1:11,0:11:33.04:359,33,0	1/1:9,1:10:24.02:262,24,0	1/1:5,0:4:2.89:20,3,0	1/1:0,13:13:23.99:218,24,0	1/1:0,14:14:32.99:314,33,0	1/1:0,9:9:21.03:200,21,0	1/1:0,4:4:9.02:88,9,0
chr10	61451453	.	AT	A	4309.82	PASS	AC=52;AF=0.963;AN=54;BaseQRankSum=1.903;DP=223;FS=23.609;HRun=5;HaplotypeScore=133.7986;InbreedingCoeff=0.4258;MQ=31.85;MQ0=0;MQRankSum=-1.253;QD=19.50;ReadPosRankSum=1.799;VQSLOD=3.2484;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,16:12:27.07:302,27,0	1/1:0,8:8:20.99:187,21,0	0/0:1,0:1:3.01:0,3,41	./.	1/1:0,12:8:9.01:102,9,0	1/1:1,5:6:12.03:135,12,0	1/1:0,7:7:18.03:188,18,0	1/1:2,7:8:12.01:118,12,0	1/1:0,5:5:15:136,15,0	1/1:0,10:10:15.49:144,15,0	1/1:0,9:9:14.91:128,15,0	1/1:0,4:4:12:105,12,0	1/1:1,8:9:14.69:137,15,0	1/1:0,13:13:35.93:316,36,0	1/1:1,7:8:20.99:189,21,0	1/1:0,6:6:18:160,18,0	1/1:0,8:8:23.98:206,24,0	1/1:2,5:7:15.04:170,15,0	1/1:0,3:3:9.01:87,9,0	1/1:0,9:9:20.61:181,21,0	1/1:0,3:3:5.89:39,6,0	1/1:2,9:11:21.33:249,21,0	1/1:1,10:11:18.17:214,18,0	1/1:1,4:4:2.45:18,2,0	1/1:0,13:13:26.98:243,27,0	1/1:3,11:14:23.98:239,24,0	1/1:1,9:10:20.93:196,21,0	1/1:0,4:4:12.02:119,12,0
chr10	61451730	.	GT	G	7802.33	PASS	AB=0.900;AC=38;AF=0.679;AN=56;BaseQRankSum=-0.191;DP=591;FS=9.697;HRun=11;HaplotypeScore=134.0815;InbreedingCoeff=0.8721;MQ=63.70;MQ0=2;MQRankSum=-1.011;QD=19.46;ReadPosRankSum=2.954;VQSLOD=4.1425;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:46:99:0,109,607	1/1:2,9:11:20.95:172,21,0	0/1:19,0:13:0.59:1,0,192	0/1:6,2:7:34.26:34,0,72	0/0:6,0:31:59.86:0,60,305	0/0:3,0:21:45.61:0,46,234	0/0:4,0:12:16.80:0,17,81	1/1:3,15:18:44.83:365,45,0	1/1:2,11:13:32.94:271,33,0	1/1:3,23:26:68.90:565,69,0	1/1:0,14:14:41.95:345,42,0	1/1:4,29:33:83.87:689,84,0	1/1:5,18:23:53.89:443,54,0	1/1:0,16:16:47.95:394,48,0	1/1:4,23:27:65.83:542,66,0	1/1:3,19:22:59.89:489,60,0	1/1:2,31:33:77.91:640,78,0	0/0:4,0:25:56.99:0,57,320	1/1:4,17:20:47.90:391,48,0	1/1:3,19:22:56.91:468,57,0	1/1:6,9:15:29.89:243,30,0	0/0:2,0:18:31.09:0,31,162	0/0:2,0:19:28.08:0,28,148	0/0:4,0:17:28.52:0,29,147	1/1:0,22:22:62.89:512,63,0	1/1:1,19:20:56.93:468,57,0	1/1:0,29:30:77.13:623,77,0	1/1:2,6:8:17.94:148,18,0
chr10	61451840	.	T	TA	10974.61	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-8.412;DP=590;FS=22.592;HRun=6;HaplotypeScore=76.6998;InbreedingCoeff=0.9990;MQ=66.55;MQ0=0;MQRankSum=-0.801;QD=30.66;ReadPosRankSum=0.711;VQSLOD=3.0655;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:69.15:0,69,703	1/1:1,17:18:32.89:411,33,0	0/0:25,0:23:47.55:0,48,569	0/0:14,0:11:24.05:0,24,245	0/0:29,0:29:81.16:0,81,815	0/0:26,0:26:72.16:0,72,734	0/0:16,0:16:42.08:0,42,421	1/1:5,24:29:72.22:903,72,0	1/1:2,15:17:42.13:528,42,0	1/1:3,21:23:63.20:792,63,0	1/1:2,15:17:36.12:453,36,0	1/1:2,22:24:54.17:679,54,0	1/1:4,23:27:69.21:855,69,0	1/1:3,13:16:36.12:453,36,0	1/1:4,18:22:54.17:679,54,0	1/1:2,16:18:45.14:566,45,0	1/1:1,17:18:51.16:642,51,0	0/0:20,0:20:54.12:0,54,550	1/1:1,15:15:42.13:527,42,0	1/1:1,15:16:42.09:510,42,0	1/1:0,8:8:24.08:302,24,0	0/0:27,0:27:72.16:0,72,734	0/0:26,0:26:63.14:0,63,643	0/0:23,0:23:59.87:0,60,612	1/1:1,23:24:54.17:679,54,0	1/1:4,28:32:81.26:1019,81,0	1/1:0,23:23:54:673,54,0	1/1:0,9:9:24.08:302,24,0
chr10	61452659	.	A	AAATTATAAGAGGG	54525.19	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=11.236;DP=601;FS=8.632;HRun=0;HaplotypeScore=245.0650;InbreedingCoeff=0.9953;MQ=81.40;MQ0=3;MQRankSum=-18.831;QD=147.76;ReadPosRankSum=0.399;VQSLOD=3.7878;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,141,5415	1/1:3,4:7:18.06:1182,18,0	0/0:33,0:33:84.25:0,84,2708	0/0:16,0:16:45.12:0,45,1230	0/0:23,0:23:69.24:0,69,2807	0/0:24,0:24:72.25:0,72,2870	0/0:13,0:13:36.12:0,36,1402	1/1:29,4:34:84.75:4478,85,0	1/1:7,14:21:45.12:2577,45,0	1/1:12,15:29:78.27:4265,78,0	1/1:18,8:28:69.24:3635,69,0	1/1:9,9:18:51.18:3290,51,0	1/1:7,8:17:42.14:2278,42,0	1/1:9,4:13:36.12:2003,36,0	1/1:9,11:21:51.17:2959,51,0	1/1:14,17:33:90.31:5188,90,0	1/1:5,4:10:27.09:1744,27,0	0/0:8,0:8:24.04:0,24,849	1/1:8,9:17:45.15:2566,45,0	1/1:16,13:29:72.25:3884,72,0	1/1:4,3:7:15.05:811,15,0	0/0:30,0:30:87.29:0,87,3208	0/0:17,0:17:51.18:0,51,2050	0/0:20,0:20:57.20:0,57,2184	1/1:18,8:26:78.27:4196,78,0	1/1:10,11:21:60.21:3414,60,0	1/1:11,14:25:78.27:4844,78,0	1/1:4,3:9:21.07:1212,21,0
chr10	61452689	.	C	CA	549.01	PASS	AB=0.996;AC=21;AF=0.375;AN=56;BaseQRankSum=8.224;DP=538;FS=6.468;HRun=0;HaplotypeScore=176.3132;InbreedingCoeff=0.1438;MQ=89.29;MQ0=0;MQRankSum=2.129;QD=2.01;ReadPosRankSum=-6.053;VQSLOD=0.2594;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,144,1899	1/1:5,0:5:3.74:23,4,0	0/0:32,0:32:82.08:0,82,1082	0/0:20,0:20:46.02:0,46,669	0/0:25,0:25:69.02:0,69,852	0/0:25,0:25:72.15:0,72,958	0/0:19,0:19:57.19:0,57,794	1/1:20,1:21:39.67:200,40,0	0/1:22,0:22:10.76:11,0,22	1/1:9,0:9:10:44,10,0	0/1:18,0:18:23.78:37,0,24	0/1:15,0:15:4.67:28,0,5	0/1:14,0:14:10.51:19,0,11	0/1:17,0:17:18.34:32,0,18	0/1:18,0:18:17.06:31,0,17	0/1:30,0:30:14.66:67,0,15	0/1:14,0:14:6.08:6,0,15	0/0:13,0:13:36.01:0,36,476	0/0:14,0:14:6.88:0,7,20	0/1:16,0:16:10.01:17,0,10	1/1:7,0:7:6.07:25,6,0	0/0:22,0:22:59.86:0,60,644	0/0:22,0:22:62.95:0,63,743	0/0:18,0:18:54.15:0,54,733	0/1:21,1:22:14.57:50,0,15	1/1:15,2:17:7.52:119,8,0	0/1:28,0:27:17.31:17,0,37	0/0:7,0:7:5.32:0,5,12
chr10	61453190	.	C	CTG	10025.10	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=12.848;DP=427;FS=127.438;HRun=0;HaplotypeScore=169.4918;InbreedingCoeff=0.9357;MQ=84.20;MQ0=0;MQRankSum=-12.025;QD=37.97;ReadPosRankSum=2.530;VQSLOD=0.8437;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:64.77:0,65,906	1/1:3,1:4:2.97:55,3,0	0/0:23,0:23:60.13:0,60,835	0/0:17,0:17:48.12:0,48,648	0/0:15,0:15:42.01:0,42,531	0/0:29,0:29:75.25:0,75,1074	0/0:11,0:11:30.10:0,30,423	1/1:7,13:20:42.14:768,42,0	1/1:3,7:10:18.06:329,18,0	1/1:4,18:22:48.16:878,48,0	1/1:4,10:14:24.08:438,24,0	1/1:3,13:16:36.12:658,36,0	1/1:3,14:17:36.12:655,36,0	1/1:7,15:22:45.14:820,45,0	1/1:4,26:30:72.25:1315,72,0	1/1:2,16:18:45.15:821,45,0	1/1:3,9:12:27.09:493,27,0	0/0:4,0:4:12.04:0,12,172	1/1:4,10:14:30.10:549,30,0	1/1:3,14:17:30.10:548,30,0	1/1:2,4:6:6:110,6,0	0/0:11,0:11:21.06:0,21,274	0/0:18,0:18:33.06:0,33,432	0/0:11,0:11:24.08:0,24,337	1/1:2,9:11:24.08:438,24,0	1/1:5,10:15:27.09:494,27,0	1/1:4,10:14:30.10:548,30,0	1/1:0,2:2:6.02:110,6,0
chr10	61454827	.	G	GACATGACATA	27590.14	PASS	AC=34;AF=0.630;AN=54;BaseQRankSum=16.812;DP=562;FS=66.163;HRun=0;HaplotypeScore=185.5990;InbreedingCoeff=0.9809;MQ=84.64;MQ0=0;MQRankSum=-16.927;QD=98.89;ReadPosRankSum=4.161;VQSLOD=2.5571;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,141,4676	1/1:7,4:11:21.07:1150,21,0	0/0:19,0:20:49.63:0,50,1680	0/0:31,0:31:84.25:0,84,2503	0/0:28,0:28:84.29:0,84,2750	0/0:23,0:23:63.22:0,63,2124	0/0:29,0:29:87.28:0,87,2881	1/1:17,4:24:48.11:2187,48,0	1/1:5,11:18:27.09:1478,27,0	1/1:8,13:24:57.18:2857,57,0	1/1:6,4:12:15.05:821,15,0	1/1:6,13:20:42.10:2152,42,0	1/1:8,13:24:45.15:2433,45,0	1/1:4,6:10:18.06:985,18,0	1/1:3,12:18:36.12:1971,36,0	1/1:9,17:26:42.14:2300,42,0	1/1:7,5:12:27.09:1367,27,0	0/0:9,0:9:27.09:0,27,878	1/1:7,5:12:24.08:1244,24,0	1/1:7,4:10:9.03:493,9,0	1/1:6,2:11:12.04:657,12,0	0/0:32,0:32:96.33:0,96,3262	0/0:23,0:23:69.22:0,69,2312	0/0:40,0:40:99:0,117,3909	1/1:7,7:14:21.07:1150,21,0	1/1:3,9:14:39.13:1939,39,0	1/1:5,12:18:48.16:2408,48,0	./.
chr10	61455684	.	TG	T	13118.57	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=19.786;DP=619;FS=3.020;HRun=2;HaplotypeScore=172.9875;InbreedingCoeff=0.9974;MQ=93.05;MQ0=0;MQRankSum=-14.324;QD=34.61;ReadPosRankSum=3.646;VQSLOD=4.3916;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:63.21:0,63,943	1/1:0,7:7:21.07:272,21,0	0/0:32,0:32:93.28:0,93,1315	0/0:31,0:31:93.28:0,93,1356	0/0:36,0:36:99:0,108,1619	0/0:25,0:25:75.25:0,75,1124	0/0:24,0:24:69.23:0,69,1034	1/1:1,23:24:69.21:883,69,0	1/1:2,17:19:54.16:687,54,0	1/1:1,38:39:99:1441,111,0	1/1:3,17:20:45.14:575,45,0	1/1:0,14:14:39.13:506,39,0	1/1:0,29:29:69.22:894,69,0	1/1:2,16:18:42.14:545,42,0	1/1:0,28:28:75.24:973,75,0	1/1:0,27:27:72.23:934,72,0	1/1:0,20:20:54.18:700,54,0	0/0:7,0:7:18.06:0,18,270	1/1:1,11:12:33.11:428,33,0	1/1:0,26:26:75.24:973,75,0	1/1:0,11:11:21.07:272,21,0	0/0:19,0:19:57.18:0,57,829	0/0:27,0:27:81.27:0,81,1212	0/0:18,0:18:54.18:0,54,806	1/1:0,17:17:48.16:623,48,0	1/1:0,26:26:75.24:973,75,0	1/1:1,32:33:84.27:1090,84,0	1/1:0,9:9:27.09:350,27,0
chr10	61455738	.	A	AG	5211.53	PASS	AB=1.000;AC=34;AF=0.607;AN=56;BaseQRankSum=16.050;DP=598;FS=0.336;HRun=1;HaplotypeScore=175.5462;InbreedingCoeff=0.8408;MQ=90.85;MQ0=0;MQRankSum=-14.220;QD=14.60;ReadPosRankSum=5.469;VQSLOD=4.7258;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:69.17:0,69,859	1/1:7,0:7:17.91:138,18,0	0/0:34,0:34:73.59:0,74,1017	0/0:27,0:26:72.16:0,72,882	0/0:31,0:31:66.05:0,66,800	0/0:28,0:28:81.20:0,81,1030	0/0:24,0:24:72.22:0,72,920	1/1:26,0:26:66.05:434,66,0	1/1:9,0:9:25.09:186,25,0	1/1:25,0:25:48.91:360,49,0	1/1:16,0:16:19.09:158,19,0	0/1:16,0:16:1.24:218,0,1	1/1:21,0:21:21.24:294,21,0	1/1:15,0:15:17.10:289,17,0	1/1:25,0:25:25.55:462,26,0	1/1:33,0:33:69.33:698,69,0	1/1:21,0:21:12.02:232,12,0	0/0:12,0:12:36.12:0,36,465	1/1:11,1:12:18.49:126,18,0	1/1:30,1:31:1.38:183,1,0	1/1:13,0:13:22.54:195,23,0	0/0:16,0:16:42.01:0,42,507	0/0:16,0:16:36.10:0,36,451	0/0:22,0:22:63.20:0,63,818	1/1:22,1:23:31.57:318,32,0	1/1:26,1:27:45.46:336,45,0	1/1:32,0:32:51.50:533,52,0	0/1:5,0:5:27.88:52,0,28
chr10	61455739	.	G	GT	11182.95	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=17.951;DP=569;FS=0.703;HRun=2;HaplotypeScore=138.1680;InbreedingCoeff=0.9896;MQ=90.46;MQ0=0;MQRankSum=-15.883;QD=32.70;ReadPosRankSum=1.276;VQSLOD=4.4520;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:66.14:0,66,785	1/1:0,7:7:18.06:255,18,0	0/0:30,0:30:78.21:0,78,956	0/0:28,0:27:66.18:0,66,800	0/0:25,0:25:60.18:0,60,731	0/0:28,0:28:78.23:0,78,954	0/0:24,0:24:69.20:0,69,833	1/1:4,25:29:75.20:1025,75,0	1/1:2,8:10:27.08:372,27,0	1/1:2,17:19:54.17:747,54,0	1/1:3,11:15:32.90:378,33,0	1/1:4,12:16:36.11:498,36,0	1/1:5,17:22:48.08:614,48,0	1/1:2,14:16:39.13:560,39,0	1/1:3,22:25:66.18:920,66,0	1/1:2,31:33:96.28:1335,96,0	1/1:2,19:21:36.11:499,36,0	0/0:12,0:12:36.11:0,36,446	1/1:4,7:11:24.07:316,24,0	1/1:5,22:27:65.69:673,66,0	1/1:4,10:14:35.91:420,36,0	0/0:15,0:15:36.11:0,36,446	0/0:15,0:15:36.10:0,36,434	0/0:23,0:23:66.19:0,66,805	1/1:5,16:21:57.04:700,57,0	1/1:3,16:19:48.15:658,48,0	1/1:3,29:32:78.22:1081,78,0	1/1:2,3:5:9.03:129,9,0
chr10	61455757	.	T	TG	11275.48	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=15.155;DP=525;FS=0.352;HRun=3;HaplotypeScore=119.2295;InbreedingCoeff=0.9945;MQ=92.65;MQ0=0;MQRankSum=-13.947;QD=34.38;ReadPosRankSum=-1.825;VQSLOD=3.5686;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:51.16:0,51,609	1/1:1,4:5:12.04:164,12,0	0/0:31,0:31:62.33:0,62,807	0/0:28,0:27:71.34:0,71,779	0/0:22,0:22:63.19:0,63,756	0/0:22,0:22:47.19:0,47,659	0/0:19,0:19:54.08:0,54,617	1/1:7,24:31:72.15:950,72,0	1/1:2,13:15:39.13:541,39,0	1/1:3,13:16:42.13:569,42,0	1/1:3,9:12:33.01:418,33,0	1/1:1,15:16:42.13:558,42,0	1/1:5,15:20:36.01:475,36,0	1/1:0,16:16:42.14:586,42,0	1/1:2,29:31:84.21:1143,84,0	1/1:5,24:29:84.07:1095,84,0	1/1:3,16:19:50.22:722,50,0	0/0:13,0:13:39.09:0,39,453	1/1:3,7:10:24.03:313,24,0	1/1:4,19:23:60.20:836,60,0	1/1:1,12:13:38.96:471,39,0	0/0:12,0:12:30.08:0,30,347	0/0:12,0:12:36.11:0,36,428	0/0:20,0:20:57.17:0,57,684	1/1:3,7:10:24.07:318,24,0	1/1:3,16:19:54.07:697,54,0	1/1:3,30:33:84.08:1096,84,0	1/1:1,9:10:26.95:326,27,0
chr10	61455972	.	TA	T	9545.16	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=18.426;DP=592;FS=1.916;HRun=5;HaplotypeScore=140.2211;InbreedingCoeff=0.9979;MQ=82.81;MQ0=0;MQRankSum=-10.297;QD=26.81;ReadPosRankSum=2.439;VQSLOD=3.0487;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:84.26:0,84,1124	1/1:1,6:7:18.05:204,18,0	0/0:25,0:25:63.01:0,63,738	0/0:19,0:19:44.84:0,45,540	0/0:23,0:23:69.23:0,69,942	0/0:30,0:30:87.24:0,87,1125	0/0:21,0:21:57.89:0,58,738	1/1:5,17:22:48.02:496,48,0	1/1:2,16:18:48:525,48,0	1/1:3,20:23:57.16:645,57,0	1/1:4,18:22:42.12:475,42,0	1/1:2,15:17:39.11:441,39,0	1/1:2,19:21:54.05:592,54,0	1/1:3,16:19:42.12:475,42,0	1/1:2,24:26:69.20:780,69,0	1/1:1,14:15:42.12:476,42,0	1/1:5,17:21:39.08:441,39,0	0/0:14,0:14:39.13:0,39,533	1/1:4,18:22:54.15:611,54,0	1/1:4,17:21:48.13:540,48,0	1/1:4,14:18:30.08:340,30,0	0/0:20,1:21:26.14:0,26,698	0/0:26,0:26:78.25:0,78,1053	0/0:25,0:25:75.21:0,75,1004	1/1:2,23:25:60.17:674,60,0	1/1:2,26:28:78.22:881,78,0	1/1:2,21:23:63.18:713,63,0	1/1:0,7:7:21.06:238,21,0
chr10	61456104	.	G	GGA	13867.35	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=15.526;DP=488;FS=9.375;HRun=0;HaplotypeScore=102.0501;InbreedingCoeff=0.9962;MQ=82.70;MQ0=0;MQRankSum=-10.727;QD=45.92;ReadPosRankSum=3.896;VQSLOD=5.8408;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:66.19:0,66,960	1/1:1,6:6:17.95:265,18,0	0/0:19,0:19:55.06:0,55,796	0/0:20,0:20:50.25:0,50,701	0/0:27,0:27:72.24:0,72,1102	0/0:26,0:26:78.25:0,78,1166	0/0:16,0:16:48.15:0,48,713	1/1:3,19:22:66.12:1100,66,0	1/1:0,17:17:45.15:853,45,0	1/1:5,11:16:39.13:730,39,0	1/1:5,13:18:39.11:699,39,0	1/1:1,20:21:60.21:1137,60,0	1/1:0,14:14:33.11:625,33,0	1/1:1,16:17:36.12:674,36,0	1/1:4,14:18:42.14:788,42,0	1/1:1,12:13:39.12:708,39,0	1/1:0,16:16:39.13:740,39,0	0/0:5,0:5:15.04:0,15,209	1/1:2,9:12:33.11:622,33,0	1/1:0,21:21:45.15:853,45,0	1/1:0,16:16:33.11:626,33,0	0/0:17,0:17:51.17:0,51,777	0/0:18,0:18:51.16:0,51,759	0/0:15,0:15:45.15:0,45,689	1/1:4,17:19:48.10:870,48,0	1/1:2,14:16:48.16:870,48,0	1/1:1,20:21:57.20:1080,57,0	1/1:0,15:15:33.11:626,33,0
chr10	61456196	.	GA	G	8680.56	PASS	AB=0.917;AC=37;AF=0.661;AN=56;BaseQRankSum=12.966;DP=460;FS=8.780;HRun=7;HaplotypeScore=87.9013;InbreedingCoeff=0.9404;MQ=73.89;MQ0=0;MQRankSum=-7.522;QD=26.30;ReadPosRankSum=0.125;VQSLOD=4.9437;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:54.17:0,54,679	1/1:2,5:7:15.03:153,15,0	0/0:12,0:12:26.91:0,27,299	0/0:14,0:14:30.09:0,30,363	0/0:16,0:16:45.14:0,45,562	0/0:19,0:19:54.17:0,54,668	0/0:20,0:20:57.18:0,57,714	1/1:4,24:28:72.16:733,72,0	1/1:1,10:11:30.07:306,30,0	1/1:1,16:17:48.11:490,48,0	1/1:2,21:23:54.12:551,54,0	1/1:1,15:16:48.09:482,48,0	1/1:0,10:10:30.07:306,30,0	1/1:4,15:19:45.10:458,45,0	1/1:3,14:17:45.10:457,45,0	1/1:1,19:20:54.12:550,54,0	1/1:4,13:17:39.09:398,39,0	0/0:7,0:7:21.07:0,21,263	1/1:2,20:22:60.12:606,60,0	1/1:4,21:25:69.11:692,69,0	1/1:0,11:11:30.07:306,30,0	0/1:10,1:11:3.53:4,0,275	0/0:9,0:9:27.09:0,27,340	0/0:12,0:12:36.12:0,36,453	1/1:2,29:31:84.19:856,84,0	1/1:1,21:22:63.12:630,63,0	1/1:0,17:17:51.12:520,51,0	1/1:0,6:6:18.04:184,18,0
chr10	61457330	.	T	TC	847.25	PASS	AB=0.705;AC=4;AF=0.250;AN=16;BaseQRankSum=-0.092;DP=203;FS=11.017;HRun=1;HaplotypeScore=29.5858;MQ=28.64;MQ0=51;MQRankSum=-5.401;QD=15.40;ReadPosRankSum=-1.009;VQSLOD=1.5884;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,1:25:63.15:0,63,796	./.	0/0:11,0:1:3.01:0,3,39	0/0:20,0:2:6.02:0,6,78	0/0:23,0:20:54.18:0,54,698	1/1:9,27:31:45.08:643,45,0	0/1:5,7:8:17.74:214,0,18	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	0/0:26,1:14:36.12:0,36,467	./.	./.	./.	0/1:5,2:5:10.91:80,0,11	./.	./.	./.	./.	./.	./.
chr10	61463356	.	AT	A	2599.95	PASS	AB=1.000;AC=27;AF=0.563;AN=48;BaseQRankSum=14.897;DP=397;FS=6.650;HRun=1;HaplotypeScore=116.3805;InbreedingCoeff=0.8212;MQ=79.08;MQ0=0;MQRankSum=-13.753;QD=13.54;ReadPosRankSum=1.459;VQSLOD=2.8074;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:49:99:0,141,2175	./.	0/0:15,0:15:45.14:0,45,693	0/0:19,0:19:46.89:0,47,818	0/0:16,0:16:41.92:0,42,556	0/0:25,0:23:69.10:0,69,1032	0/0:14,0:14:39.12:0,39,600	1/1:23,0:20:31.11:311,31,0	1/1:0,15:14:30.09:368,30,0	1/1:4,0:3:5.96:43,6,0	./.	1/1:15,0:14:32.83:246,33,0	1/1:25,0:24:53.56:393,54,0	1/1:15,1:15:32.28:232,32,0	1/1:22,0:22:28.18:307,28,0	0/1:25,0:25:7.02:264,0,7	1/1:5,0:5:5.90:37,6,0	0/0:15,0:15:45.11:0,45,679	1/1:9,0:9:4.60:125,5,0	./.	1/1:13,0:13:4.47:130,4,0	0/0:15,0:14:39.13:0,39,621	0/0:14,0:14:39.13:0,39,622	0/0:21,0:21:63.17:0,63,979	1/1:1,0:1:2.99:24,3,0	1/1:11,0:11:29.76:216,30,0	1/1:8,0:8:14.75:99,15,0	./.
chr10	61463359	.	AG	A	5324.77	PASS	AB=1.000;AC=29;AF=0.580;AN=50;BaseQRankSum=15.162;DP=384;FS=0.838;HRun=1;HaplotypeScore=98.5479;InbreedingCoeff=0.8515;MQ=79.47;MQ0=0;MQRankSum=-12.899;QD=28.47;ReadPosRankSum=-0.886;VQSLOD=4.4037;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:48:99:0,138,2174	./.	0/0:14,0:14:41.34:0,41,593	0/0:18,1:19:45.79:0,46,760	0/0:14,0:14:42.01:0,42,605	0/0:25,0:23:69.22:0,69,1074	0/0:14,0:14:42.13:0,42,647	1/1:2,21:20:54.14:716,54,0	0/1:17,0:16:8.45:153,0,8	1/1:0,3:2:6.02:84,6,0	./.	1/1:0,14:13:33.11:455,33,0	1/1:0,24:23:54.18:737,54,0	1/1:4,12:15:39.07:476,39,0	1/1:1,20:21:48.09:633,48,0	1/1:1,20:21:48.15:641,48,0	1/1:2,4:6:12:125,12,0	0/0:13,0:13:39.13:0,39,623	1/1:0,9:9:21.07:293,21,0	./.	1/1:0,12:12:21.07:286,21,0	0/0:14,0:13:39.13:0,39,621	0/0:13,0:13:39.12:0,39,594	0/0:21,0:21:63.21:0,63,1005	1/1:0,1:1:3.01:42,3,0	1/1:0,11:11:30.10:412,30,0	1/1:2,5:7:21.03:249,21,0	1/1:2,0:2:2.99:23,3,0
chr10	61463368	.	TTA	T	5801.21	PASS	AC=34;AF=0.630;AN=54;BaseQRankSum=13.519;DP=417;FS=4.444;HRun=0;HaplotypeScore=95.3616;InbreedingCoeff=0.8746;MQ=73.86;MQ0=2;MQRankSum=-11.818;QD=26.61;ReadPosRankSum=-1.624;VQSLOD=5.1393;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:45:99:0,129,2382	1/1:0,2:2:3.01:44,3,0	0/0:15,0:15:27.17:0,27,611	0/0:19,0:19:45.10:0,45,744	0/0:16,0:16:48.16:0,48,855	0/0:25,0:23:66.23:0,66,1210	0/0:17,0:17:48.16:0,48,893	1/1:5,31:32:75.25:1091,75,0	1/1:0,19:18:30.10:441,30,0	1/1:0,2:1:3.01:44,3,0	./.	1/1:3,10:12:21.07:309,21,0	1/1:2,24:25:48.16:706,48,0	1/1:1,16:15:33.11:483,33,0	1/1:4,14:18:33.11:485,33,0	1/1:3,18:21:30.10:441,30,0	1/1:1,8:8:15.05:221,15,0	0/0:13,0:13:33.11:0,33,618	1/1:1,10:11:27.09:397,27,0	1/1:0,2:2:3.01:38,3,0	1/1:2,14:16:33.11:483,33,0	0/0:15,0:14:39.13:0,39,703	0/0:12,0:12:33.11:0,33,581	0/0:19,0:19:57.15:0,57,1031	1/1:2,1:2:3.01:44,3,0	1/1:3,8:11:18.06:265,18,0	1/1:1,8:9:15.05:220,15,0	1/1:0,3:3:6.02:88,6,0
chr10	61464854	.	TCTCAC	T	189.87	PASS	AB=0.962;AC=16;AF=0.381;AN=42;BaseQRankSum=6.557;DP=206;FS=8.121;HRun=0;HaplotypeScore=61.8609;InbreedingCoeff=0.4434;MQ=47.02;MQ0=6;MQRankSum=-4.769;QD=4.32;ReadPosRankSum=0.454;VQSLOD=0.5442;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:20:50.63:0,51,735	./.	0/0:26,0:11:30.09:0,30,631	0/0:29,0:13:28.28:0,28,657	0/0:12,0:12:32.69:0,33,582	0/0:11,0:8:12.04:0,12,228	0/0:12,0:11:20.51:0,21,384	0/1:9,2:11:65.92:66,0,359	0/0:5,0:5:3.90:0,4,58	1/1:1,0:1:2.90:16,3,0	./.	1/1:2,0:2:5.80:33,6,0	0/1:3,0:3:5.19:5,0,88	1/1:3,1:4:8.65:48,9,0	1/1:4,1:5:8.91:61,9,0	1/1:3,0:3:8.62:45,9,0	1/1:5,0:4:3.44:20,3,0	0/0:9,0:9:21.07:0,21,317	0/1:6,0:6:33.32:33,0,111	./.	./.	0/0:16,0:16:23.49:0,23,460	0/0:5,0:5:12.04:0,12,201	0/0:9,0:9:23.96:0,24,433	./.	0/1:4,0:3:12.04:12,0,50	./.	./.
chr10	61464865	.	C	CTTTCCTTCTCCT	5074.70	PASS	AB=1.000;AC=33;AF=0.611;AN=54;BaseQRankSum=-1.643;DP=287;FS=0.628;HRun=0;HaplotypeScore=101.0808;InbreedingCoeff=0.7185;MQ=60.99;MQ0=3;MQRankSum=-7.471;QD=51.78;ReadPosRankSum=-4.828;VQSLOD=3.5888;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:33:63.20:0,63,1946	1/1:2,0:2:3.01:43,3,0	0/0:29,0:21:51.39:0,51,1370	0/0:27,0:17:11.42:0,11,850	0/0:15,0:15:36.12:0,36,1319	0/0:17,0:13:9.22:0,9,185	0/0:12,0:11:14.92:0,15,265	1/1:16,0:16:6.16:1050,6,0	1/1:1,4:10:6.02:215,6,0	1/1:2,0:2:6.02:186,6,0	1/1:3,0:3:6.01:63,6,0	1/1:3,0:3:9.03:262,9,0	1/1:6,0:6:8:424,8,0	1/1:5,0:5:12.04:388,12,0	1/1:5,0:5:9.03:278,9,0	1/1:5,0:4:12:414,12,0	1/1:9,0:8:18.06:443,18,0	0/0:13,0:13:29.86:0,30,734	0/1:9,0:9:10.22:481,0,10	1/1:6,0:6:15.04:200,15,0	1/1:4,0:4:3.01:63,3,0	0/0:17,0:17:21.79:0,22,308	0/0:7,0:7:8.24:0,8,120	0/0:15,0:15:18.38:0,18,348	./.	1/1:6,0:5:6.02:294,6,0	1/1:5,0:5:11.97:182,12,0	1/1:2,0:2:6.02:89,6,0
chr10	61465128	.	ATGGGAATTG	A	3053.11	PASS	AC=32;AF=0.615;AN=52;BaseQRankSum=14.855;DP=404;FS=17.801;HRun=0;HaplotypeScore=143.4069;InbreedingCoeff=0.9454;MQ=62.72;MQ0=0;MQRankSum=-14.297;QD=13.88;ReadPosRankSum=1.939;VQSLOD=1.5185;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:81.28:0,81,3809	1/1:5,0:5:11.78:73,12,0	0/0:12,0:12:22.71:0,23,862	0/0:8,0:8:16.60:0,17,379	0/0:23,0:23:69.24:0,69,3332	0/0:26,0:26:75.26:0,75,3442	0/0:13,0:13:39.11:0,39,1571	1/1:2,12:14:32.71:228,33,0	1/1:12,0:12:30.26:194,30,0	1/1:19,0:19:44.57:307,45,0	./.	1/1:16,0:16:44.14:270,44,0	1/1:18,0:18:47.13:292,47,0	1/1:15,0:15:29.42:179,29,0	1/1:14,0:14:41.13:248,41,0	1/1:11,0:11:32.39:199,32,0	1/1:3,0:3:2.94:18,3,0	0/0:7,0:7:18.06:0,18,809	1/1:4,4:8:20.77:141,21,0	1/1:4,17:21:8.83:54,9,0	./.	0/0:23,0:23:69.24:0,69,2908	0/0:12,0:12:36.12:0,36,1730	0/0:20,0:20:57.20:0,57,2724	1/1:15,0:15:44.14:270,44,0	1/1:2,14:16:32.57:213,33,0	1/1:30,0:29:79.84:517,80,0	1/1:3,0:3:8.92:62,9,0
chr10	61465143	.	A	AT	284.87	PASS	AC=16;AF=0.364;AN=44;BaseQRankSum=6.014;DP=197;FS=1.007;HRun=0;HaplotypeScore=33.1681;InbreedingCoeff=0.6630;MQ=86.79;MQ0=0;MQRankSum=-1.033;QD=13.57;ReadPosRankSum=-6.008;VQSLOD=2.0519;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:87.25:0,87,1178	./.	0/0:9,0:9:20.97:0,21,234	0/0:5,0:5:6.65:0,7,94	0/0:28,0:28:72.22:0,72,988	0/0:24,0:24:66.15:0,66,899	0/0:12,0:12:33.11:0,33,462	1/1:3,0:3:9.01:81,9,0	1/1:1,0:1:2.99:24,3,0	1/1:2,0:2:2.97:20,3,0	1/1:2,0:2:2.96:25,3,0	0/0:1,0:1:0:0,0,0	0/0:1,0:1:0:0,0,0	1/1:3,0:3:2.86:25,3,0	1/1:0,6:6:12.04:150,12,0	./.	./.	0/0:6,0:6:18.06:0,18,252	./.	./.	0/0:1,0:1:0:0,0,0	0/0:23,0:23:69.23:0,69,963	0/0:16,0:16:45.15:0,45,629	0/0:20,0:20:60.20:0,60,838	1/1:0,3:3:6.02:81,6,0	0/0:1,0:1:0:0,0,0	./.	1/1:1,0:1:2.98:22,3,0
chr10	61465459	.	ATAAC	A	887.07	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-1.226;DP=656;FS=0.900;HRun=0;HaplotypeScore=149.9589;InbreedingCoeff=0.9988;MQ=76.53;MQ0=0;MQRankSum=-3.022;QD=46.69;ReadPosRankSum=3.787;VQSLOD=3.9416;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:69.24:0,69,1704	0/0:10,0:10:30.10:0,30,733	0/0:23,0:23:51.15:0,51,1159	0/0:15,0:15:45.15:0,45,1081	0/0:33,0:33:96.32:0,96,2392	0/0:20,0:20:57.20:0,57,1473	0/0:18,0:18:51.17:0,51,1301	0/0:36,0:36:99:0,99,2501	1/1:1,18:19:54.19:982,54,0	0/0:36,0:36:99:0,99,2492	0/0:24,0:24:63.22:0,63,1628	0/0:21,0:21:60.21:0,60,1569	0/0:28,0:28:81.28:0,81,2092	0/0:24,0:24:72.25:0,72,1806	0/0:26,0:26:72.25:0,72,1885	0/0:18,0:18:54.19:0,54,1403	0/0:30,0:30:84.29:0,84,2129	0/0:14,0:14:36.12:0,36,908	0/0:15,0:15:30.09:0,30,734	0/0:40,0:40:99:0,114,2936	0/0:25,0:25:69.24:0,69,1795	0/0:28,0:28:84.28:0,84,2065	0/0:19,0:19:54.16:0,54,1264	0/0:14,0:14:42.10:0,42,1028	0/0:31,0:31:81.28:0,81,2103	0/0:22,0:22:57.20:0,57,1452	0/0:28,0:28:81.28:0,81,2001	0/0:14,0:14:42.14:0,42,1088
chr10	61466618	.	AACC	A	4390.59	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=10.429;DP=298;FS=59.865;HRun=0;HaplotypeScore=70.3534;InbreedingCoeff=0.8821;MQ=65.74;MQ0=0;MQRankSum=-11.018;QD=43.05;ReadPosRankSum=-0.394;VQSLOD=3.0486;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:57.20:0,57,1347	1/1:2,0:2:6.02:105,6,0	0/0:9,0:9:27.09:0,27,574	0/0:6,0:5:12.04:0,12,237	0/0:25,0:25:75.22:0,75,1680	0/0:27,0:27:78.25:0,78,1782	0/0:14,0:14:42.14:0,42,973	0/0:23,0:23:60.15:0,60,841	0/0:3,0:3:9.03:0,9,150	1/1:4,3:7:21.07:365,21,0	1/1:13,2:15:30.06:495,30,0	1/1:0,2:2:6.02:106,6,0	1/1:2,1:3:9.03:159,9,0	1/1:3,2:5:15.05:254,15,0	1/1:1,3:4:3.01:53,3,0	1/1:5,5:10:30.08:473,30,0	1/1:2,2:4:9.03:152,9,0	0/0:21,0:21:60.21:0,60,1404	1/1:5,2:7:15.03:232,15,0	1/1:8,3:11:33.11:581,33,0	1/1:0,2:2:3.01:53,3,0	0/0:18,0:18:54.19:0,54,1235	0/0:21,0:21:63.19:0,63,1420	0/0:9,0:9:21.07:0,21,454	1/1:7,4:11:24.08:416,24,0	1/1:3,2:5:12.04:211,12,0	1/1:7,2:9:27.09:474,27,0	1/1:5,0:5:15.05:263,15,0
chr10	61466622	.	AAGTTT	A	2119.54	PASS	AB=1.000;AC=33;AF=0.589;AN=56;BaseQRankSum=12.377;DP=286;FS=38.480;HRun=0;HaplotypeScore=87.0640;InbreedingCoeff=0.8337;MQ=71.16;MQ0=0;MQRankSum=-12.397;QD=19.81;ReadPosRankSum=0.648;VQSLOD=1.3076;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:60.20:0,60,1793	1/1:0,2:2:6.02:70,6,0	0/0:9,0:9:27.09:0,27,739	0/0:9,0:8:21.07:0,21,513	0/0:27,0:27:81.28:0,81,2532	0/0:26,0:26:78.27:0,78,2338	0/0:14,0:14:42.14:0,42,1273	0/1:19,0:19:2.67:3,0,292	0/0:3,0:3:8.95:0,9,68	1/1:3,4:7:16.71:192,17,0	1/1:2,10:12:26.85:255,27,0	1/1:2,0:2:5.97:44,6,0	1/1:1,2:3:9:87,9,0	1/1:3,2:5:12.11:130,12,0	1/1:3,0:3:1.55:4,2,0	1/1:5,3:8:22.53:211,23,0	1/1:2,2:4:10.52:96,11,0	0/0:22,0:22:60.18:0,60,1708	1/1:2,2:4:12.01:143,12,0	1/1:3,8:11:33:332,33,0	1/1:2,0:2:1.55:4,2,0	0/0:20,0:20:60.21:0,60,1849	0/0:21,0:21:63.22:0,63,2033	0/0:8,0:8:24.08:0,24,721	1/1:4,4:8:19.58:203,20,0	1/1:2,2:4:10.56:111,11,0	1/1:2,6:8:22.60:258,23,0	1/1:0,5:5:15.05:186,15,0
chr10	61466623	.	AGTTT	A	2376.44	PASS	AC=32;AF=0.615;AN=52;BaseQRankSum=12.247;DP=283;FS=29.385;HRun=0;HaplotypeScore=79.9525;InbreedingCoeff=0.9046;MQ=72.94;MQ0=0;MQRankSum=-11.251;QD=23.07;ReadPosRankSum=-0.802;VQSLOD=1.5400;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:63.12:0,63,1399	1/1:2,0:2:6.01:62,6,0	0/0:10,0:10:27.08:0,27,541	0/0:8,0:8:14.27:0,14,337	0/0:27,0:27:75.24:0,75,1882	0/0:26,0:26:69.22:0,69,1683	0/0:14,0:14:36.12:0,36,888	1/1:5,13:18:36.05:476,36,0	1/1:3,0:3:8.89:62,9,0	1/1:7,0:7:12.04:164,12,0	1/1:12,0:12:26.99:238,27,0	1/1:2,0:2:5.88:36,6,0	1/1:3,0:3:8.95:75,9,0	1/1:4,0:4:8.96:110,9,0	./.	1/1:8,0:8:20.82:179,21,0	1/1:4,0:4:8.96:104,9,0	0/0:20,0:20:48.12:0,48,1179	1/1:4,0:4:11.97:127,12,0	1/1:11,0:11:32.83:288,33,0	./.	0/0:20,0:20:57.14:0,57,1311	0/0:21,0:21:63.18:0,63,1518	0/0:8,0:8:24.08:0,24,541	1/1:8,0:8:17.98:175,18,0	1/1:4,0:4:8.98:95,9,0	1/1:8,0:8:21.01:226,21,0	1/1:5,0:5:15.04:166,15,0
chr10	61466644	.	G	GTGAC	4966.05	PASS	AC=32;AF=0.615;AN=52;BaseQRankSum=11.135;DP=284;FS=68.565;HRun=0;HaplotypeScore=73.9265;InbreedingCoeff=0.8700;MQ=77.18;MQ0=0;MQRankSum=-11.271;QD=44.74;ReadPosRankSum=-0.742;VQSLOD=2.4934;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:54.19:0,54,984	1/1:0,2:2:6.02:130,6,0	0/0:11,0:11:27.01:0,27,426	0/0:7,0:7:20.56:0,21,340	0/0:25,0:25:72.25:0,72,1290	0/0:27,0:27:75.26:0,75,1344	0/0:14,0:14:39.13:0,39,697	1/1:7,4:11:12.04:293,12,0	./.	1/1:2,4:9:21.05:397,21,0	1/1:1,11:13:27.09:561,27,0	1/1:0,2:2:6.02:158,6,0	1/1:0,8:9:24.08:595,24,0	1/1:2,1:4:3.01:79,3,0	./.	1/1:2,3:6:6.02:142,6,0	1/1:2,3:5:9.03:236,9,0	0/0:17,0:17:45.15:0,45,828	1/1:1,3:6:12.03:251,12,0	1/1:1,10:12:30.10:671,30,0	1/1:1,2:4:6.02:157,6,0	0/0:20,0:20:57.20:0,57,1029	0/0:24,0:24:69.21:0,69,1209	0/0:8,0:8:21.07:0,21,381	1/1:1,7:8:15.05:334,15,0	1/1:0,2:2:6.02:140,6,0	1/1:2,8:10:21.07:503,21,0	1/1:4,4:8:20.93:320,21,0
chr10	61466869	.	TAA	T	416.22	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.735;DP=493;FS=6.867;HRun=5;HaplotypeScore=85.8076;InbreedingCoeff=0.9261;MQ=78.65;MQ0=0;MQRankSum=-0.018;QD=32.02;ReadPosRankSum=-4.773;VQSLOD=2.3093;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:42.13:0,42,740	0/0:5,0:5:15.04:0,15,163	0/0:20,0:20:25.97:0,26,726	0/0:14,0:14:33.11:0,33,537	0/0:41,0:41:99:0,120,2192	0/0:15,0:15:45.14:0,45,780	0/0:14,0:14:36.12:0,36,655	1/1:0,13:13:39.10:511,39,0	0/0:16,0:16:48.04:0,48,473	0/0:13,0:13:33.04:0,33,337	0/0:5,0:5:12.04:0,12,146	0/0:20,0:20:54.11:0,54,559	0/0:30,0:30:84.17:0,84,889	0/0:21,0:21:57.13:0,57,613	0/0:28,0:28:53.24:0,53,743	0/0:17,0:17:18.12:0,18,362	0/0:24,0:24:69.64:0,70,743	0/0:21,0:21:63.22:0,63,1106	0/0:17,0:17:20.27:0,20,403	0/0:19,0:19:54.11:0,54,561	0/0:14,0:14:39.05:0,39,401	0/0:16,0:16:48.08:0,48,809	0/0:20,0:20:54.19:0,54,989	0/0:12,0:12:36.12:0,36,653	0/0:10,0:10:15.04:0,15,167	0/0:23,0:23:39.73:0,40,517	0/0:22,0:22:33.23:0,33,568	0/0:8,0:8:24.06:0,24,263
chr10	61467072	.	G	GA	4403.71	PASS	AB=0.766;AC=18;AF=0.321;AN=56;BaseQRankSum=16.764;DP=600;FS=14.623;HRun=3;HaplotypeScore=208.2920;InbreedingCoeff=-0.4716;MQ=47.48;MQ0=7;MQRankSum=-12.477;QD=10.69;ReadPosRankSum=5.016;VQSLOD=1.4526;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:63.21:0,63,873	0/1:5,4:9:99:149,0,105	0/0:25,0:9:4.60:0,5,195	0/0:17,0:9:12.75:0,13,161	0/0:20,0:20:57.19:0,57,790	0/0:22,0:18:54.17:0,54,732	0/0:13,0:13:36.12:0,36,498	0/0:27,0:25:36.36:0,36,799	0/1:19,6:24:99:291,0,556	0/1:11,10:21:99:362,0,320	0/1:7,7:13:99:202,0,194	0/1:20,7:26:99:247,0,351	0/1:27,11:36:99:340,0,474	0/1:18,5:23:99:146,0,374	0/1:20,5:24:99:147,0,449	0/1:21,12:33:99:447,0,310	0/1:19,2:24:47.80:48,0,446	0/0:13,0:13:36.12:0,36,500	0/1:9,6:15:99:236,0,250	0/1:11,10:20:99:292,0,242	0/0:4,0:5:6.86:0,7,160	0/0:20,0:19:51.12:0,51,704	0/1:16,1:17:3.17:3,0,491	0/1:10,1:11:5.77:6,0,302	0/1:9,16:25:99:531,0,227	0/1:20,11:30:99:359,0,705	0/1:20,13:33:99:391,0,312	0/1:13,7:20:99:208,0,444
chr10	61467097	.	A	AAGAG	4803.84	PASS	AB=1.000;AC=49;AF=0.907;AN=54;BaseQRankSum=1.757;DP=718;FS=2.025;HRun=0;HaplotypeScore=328.8769;InbreedingCoeff=0.6182;MQ=44.24;MQ0=22;MQRankSum=0.117;QD=7.63;ReadPosRankSum=2.894;VQSLOD=2.7662;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,12:27:20.29:383,20,0	1/1:10,0:10:14.71:83,15,0	0/0:29,0:8:2.54:0,3,10	0/0:56,0:16:4.26:0,4,76	1/1:10,10:20:29.43:383,29,0	1/1:28,0:24:20.88:161,21,0	1/1:18,0:18:17.87:136,18,0	1/1:59,0:54:42.25:258,42,0	0/1:34,0:32:6.08:6,0,171	1/1:24,0:24:36.20:186,36,0	1/1:15,0:15:25.17:147,25,0	1/1:27,0:26:31.54:209,32,0	1/1:37,0:35:47.78:238,48,0	1/1:18,0:18:18.68:112,19,0	1/1:24,0:23:28.17:152,28,0	1/1:30,0:30:39.24:275,39,0	1/1:21,0:21:11.46:69,11,0	1/1:3,0:10:19.21:86,19,0	1/1:27,0:23:16.37:97,16,0	1/1:22,0:21:32.95:220,33,0	./.	1/1:24,0:24:29.94:303,30,0	1/1:19,0:20:17.93:178,18,0	1/1:19,0:19:18:195,18,0	1/1:29,0:27:60.49:350,60,0	1/1:30,0:29:40.53:266,41,0	1/1:35,0:35:39.40:191,39,0	1/1:18,0:17:24.09:120,24,0
chr10	61467107	.	G	GAA	11133.82	PASS	AB=1.000;AC=38;AF=0.679;AN=56;BaseQRankSum=10.056;DP=785;FS=12.533;HRun=1;HaplotypeScore=299.5596;InbreedingCoeff=0.6113;MQ=45.74;MQ0=28;MQRankSum=-9.158;QD=20.13;ReadPosRankSum=5.643;VQSLOD=1.3594;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:30:7.86:8,0,221	1/1:0,11:11:24.04:388,24,0	0/0:47,0:13:15.32:0,15,115	0/0:83,0:21:39.23:0,39,366	0/0:21,0:20:20.52:0,21,350	0/1:30,0:26:14.07:14,0,184	0/0:19,0:19:33.18:0,33,317	1/1:60,7:62:74.04:974,74,0	0/1:34,0:32:99:196,0,143	1/1:4,20:24:59.98:806,60,0	1/1:8,9:15:38.78:513,39,0	1/1:5,21:26:47.54:654,48,0	1/1:6,27:32:60.04:920,60,0	1/1:5,15:20:26.98:385,27,0	1/1:6,20:25:41.98:585,42,0	1/1:9,22:31:53.92:671,54,0	1/1:4,14:20:20.88:222,21,0	0/1:12,0:10:21.07:127,0,21	1/1:21,4:21:46.82:509,47,0	1/1:6,19:24:45.95:631,46,0	1/1:4,0:4:5.99:61,6,0	0/0:24,0:23:0.21:0,0,157	0/0:19,0:19:20.25:0,20,234	0/0:18,0:18:7.81:0,8,84	1/1:9,21:29:66.11:969,66,0	1/1:2,29:30:83.70:1042,84,0	1/1:6,29:35:59.95:856,60,0	1/1:10,9:17:47.93:604,48,0
chr10	61467448	.	T	TAG	21407.38	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-1.065;DP=663;FS=11.943;HRun=0;HaplotypeScore=123.3239;InbreedingCoeff=0.9852;MQ=91.85;MQ0=0;MQRankSum=-6.988;QD=40.70;ReadPosRankSum=4.683;VQSLOD=6.2311;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,129,1730	1/1:2,5:7:12.04:216,12,0	0/0:33,0:33:79.58:0,80,1051	0/0:27,0:26:64.33:0,64,708	0/0:23,0:23:66.22:0,66,923	1/1:1,17:18:39.13:702,39,0	1/1:1,24:25:63.22:1134,63,0	1/1:6,23:30:72.21:1195,72,0	1/1:4,30:34:78.27:1403,78,0	1/1:1,28:29:87.24:1485,87,0	1/1:2,15:17:30.10:523,30,0	1/1:7,21:28:48.16:864,48,0	1/1:0,19:19:51.12:883,51,0	1/1:1,24:26:54.19:972,54,0	1/1:2,20:22:45.15:810,45,0	1/1:1,23:25:63.22:1134,63,0	1/1:3,29:32:81.28:1458,81,0	0/0:10,0:10:27.06:0,27,341	1/1:1,16:17:48.14:802,48,0	1/1:3,19:23:42.14:754,42,0	1/1:4,16:20:39.13:702,39,0	1/1:2,22:24:54.19:972,54,0	1/1:2,19:21:45.15:808,45,0	1/1:0,10:10:27.09:486,27,0	1/1:1,27:28:54.12:970,54,0	1/1:3,29:32:96.29:1679,96,0	1/1:3,31:35:69.24:1241,69,0	1/1:0,4:4:12.04:216,12,0
chr10	61467563	.	C	CAG	1102.07	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-0.708;DP=746;FS=2.551;HRun=0;HaplotypeScore=184.7757;InbreedingCoeff=0.9812;MQ=81.67;MQ0=0;MQRankSum=-2.999;QD=33.40;ReadPosRankSum=0.544;VQSLOD=4.7846;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,102,1276	0/0:11,0:11:24.05:0,24,284	0/0:27,0:27:57.11:0,57,674	0/0:46,0:45:51.43:0,51,918	0/0:32,0:32:75.22:0,75,923	0/0:24,0:24:60.19:0,60,750	0/0:27,0:27:78.20:0,78,936	0/0:28,0:28:63.20:0,63,788	1/1:11,22:33:75.24:1197,75,0	0/0:36,0:36:90.28:0,90,1117	0/0:18,0:18:51.16:0,51,638	0/0:33,0:33:78.25:0,78,970	0/0:28,0:28:60.18:0,60,738	0/0:34,0:34:90.26:0,90,1097	0/0:27,0:27:66.21:0,66,825	0/0:37,0:36:93.27:0,93,1138	0/0:38,0:38:93.30:0,93,1163	0/0:9,0:9:27.09:0,27,338	0/0:16,0:16:33.11:0,33,413	0/0:21,0:21:36.10:0,36,433	0/0:35,0:35:81.24:0,81,998	0/0:20,0:20:51.16:0,51,638	0/0:20,0:20:48.15:0,48,600	0/0:22,0:22:51.16:0,51,638	0/0:21,0:21:48.15:0,48,599	0/0:27,0:27:66.20:0,66,815	0/0:31,0:31:78.22:0,78,948	0/0:6,0:6:15.05:0,15,188
chr10	61468692	.	C	CAA	18572.57	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=6.122;DP=705;FS=7.793;HRun=7;HaplotypeScore=112.5417;InbreedingCoeff=0.9910;MQ=83.88;MQ0=0;MQRankSum=-3.231;QD=39.02;ReadPosRankSum=0.587;VQSLOD=3.5807;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:69.18:0,69,804	1/1:0,9:10:30.10:472,30,0	0/0:25,0:25:63.03:0,63,693	0/0:20,0:20:39.03:0,39,437	0/0:31,0:31:93.26:0,93,1072	0/0:29,0:29:81.23:0,81,944	0/0:19,0:19:48.12:0,48,548	1/1:3,32:35:96.33:1562,96,0	1/1:4,0:23:44.92:158,45,0	1/1:3,23:26:72.25:1164,72,0	1/1:1,27:28:81.28:1329,81,0	1/1:4,33:38:99:1634,102,0	1/1:8,26:34:75.26:1231,75,0	1/1:3,20:23:60.17:943,60,0	1/1:8,32:41:93.27:1477,93,0	1/1:3,20:23:57.19:935,57,0	1/1:2,19:21:54.18:886,54,0	0/0:10,0:10:24.07:0,24,280	1/1:2,15:17:42.14:689,42,0	1/1:7,32:40:95.81:1535,96,0	1/1:1,16:18:41.63:649,42,0	0/0:20,0:20:54.16:0,54,629	0/0:26,0:26:66.19:0,66,769	0/0:22,0:22:66.20:0,66,769	1/1:2,29:31:78.27:1280,78,0	1/1:6,23:30:72.24:1158,72,0	1/1:2,32:34:81.28:1322,81,0	1/1:0,4:4:9.03:148,9,0
chr10	61468909	.	GA	G	16932.74	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=16.850;DP=673;FS=2.155;HRun=2;HaplotypeScore=124.0051;InbreedingCoeff=0.9996;MQ=84.86;MQ0=0;MQRankSum=-5.781;QD=36.41;ReadPosRankSum=4.736;VQSLOD=4.4230;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:78.26:0,78,1169	1/1:0,9:9:24.08:312,24,0	0/0:23,0:23:64.92:0,65,969	0/0:33,0:33:93.76:0,94,1318	0/0:21,0:21:63.20:0,63,924	0/0:19,0:19:57.17:0,57,816	0/0:13,0:13:33.11:0,33,494	1/1:0,21:21:63.15:762,63,0	1/1:0,27:27:81.26:1052,81,0	1/1:1,20:21:60.20:779,60,0	1/1:0,26:26:69.22:896,69,0	1/1:0,30:30:87.28:1129,87,0	1/1:1,31:32:87.28:1129,87,0	1/1:0,36:36:99:1283,99,0	1/1:1,30:31:90.29:1169,90,0	1/1:1,24:25:72.23:935,72,0	1/1:0,21:21:60.20:779,60,0	0/0:15,0:15:39.07:0,39,537	1/1:1,19:20:57.15:710,57,0	1/1:1,29:30:72.71:935,73,0	1/1:0,31:31:87.28:1130,87,0	0/0:17,0:17:51.16:0,51,745	0/0:20,0:20:57.17:0,57,815	0/0:21,0:21:63.21:0,63,944	1/1:0,28:28:75.24:974,75,0	1/1:0,23:23:69.22:895,69,0	1/1:0,36:36:99:1363,105,0	1/1:0,18:18:54.18:701,54,0
chr10	61469364	.	AT	A	17095.18	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=17.309;DP=736;FS=8.901;HRun=1;HaplotypeScore=97.6508;InbreedingCoeff=0.9999;MQ=86.18;MQ0=0;MQRankSum=-3.803;QD=39.48;ReadPosRankSum=0.737;VQSLOD=4.6597;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,132,2026	1/1:0,17:17:51.17:713,51,0	0/0:32,0:32:96.32:0,96,1502	0/0:19,0:19:51.15:0,51,790	0/0:33,0:33:99:0,99,1511	0/0:24,0:24:72.23:0,72,1125	0/0:23,0:23:69.24:0,69,1093	1/1:0,36:36:99:1341,102,0	0/0:21,0:21:63.21:0,63,1003	1/1:0,26:26:78.24:1060,78,0	1/1:0,24:24:69.23:965,69,0	1/1:0,40:40:99:1595,114,0	1/1:0,22:22:63.21:878,63,0	1/1:0,31:31:87.29:1212,87,0	1/1:0,28:28:75.25:1049,75,0	1/1:0,40:40:99:1637,117,0	1/1:0,23:23:66.18:901,66,0	0/0:28,0:28:78.27:0,78,1245	1/1:0,22:22:66.21:909,66,0	1/1:0,27:27:75.25:1042,75,0	1/1:0,12:12:30.10:420,30,0	0/0:22,0:22:66.21:0,66,1029	0/0:25,0:25:72.19:0,72,1121	0/0:31,0:31:93.30:0,93,1463	1/1:0,18:18:45.15:630,45,0	1/1:0,25:25:75.24:1027,75,0	1/1:0,32:32:93.31:1298,93,0	1/1:0,10:10:30.10:419,30,0
chr10	61470261	.	AATG	A	106.19	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=0.587;DP=356;FS=1.649;HRun=0;HaplotypeScore=96.4087;InbreedingCoeff=0.8001;MQ=62.84;MQ0=6;MQRankSum=1.253;QD=3.66;ReadPosRankSum=-1.717;VQSLOD=1.6203;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:42.38:0,42,759	0/0:4,0:3:9:0,9,99	0/0:17,0:13:22.19:0,22,587	0/0:15,0:14:24.95:0,25,521	0/0:20,0:19:54.17:0,54,1028	1/1:1,10:10:6.02:101,6,0	1/1:2,16:15:6.02:105,6,0	0/0:18,0:16:45.09:0,45,699	0/0:11,0:10:27.08:0,27,458	0/0:22,0:20:57.16:0,57,944	0/0:10,0:9:24.07:0,24,373	0/0:9,0:9:24.05:0,24,376	0/0:15,0:15:45.14:0,45,749	0/0:12,0:12:36.08:0,36,538	0/0:10,0:8:24.08:0,24,404	0/0:8,0:8:24.03:0,24,355	0/0:8,0:7:21.07:0,21,359	0/0:11,0:11:30.10:0,30,593	0/0:3,0:3:9.03:0,9,140	0/0:10,0:10:26.99:0,27,373	0/0:9,0:8:15.02:0,15,233	0/0:19,0:19:54.16:0,54,1012	0/0:22,0:22:57.18:0,57,1103	0/0:12,0:12:24.55:0,25,474	0/0:9,0:8:24.08:0,24,390	0/0:17,0:16:45.09:0,45,684	0/0:10,0:10:30.09:0,30,483	0/0:6,0:6:14.97:0,15,220
chr10	61470340	.	AAG	A	346.47	PASS	AB=0.881;AC=11;AF=0.262;AN=42;BaseQRankSum=-0.638;DP=206;FS=6.396;HRun=0;HaplotypeScore=33.5381;InbreedingCoeff=-0.0906;MQ=29.32;MQ0=32;MQRankSum=0.924;QD=4.28;ReadPosRankSum=0.772;VQSLOD=0.7906;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:14,0:12:28.87:114,0,29	./.	0/0:9,0:1:3:0,3,27	0/0:12,0:2:3.01:0,3,34	0/1:17,0:11:17.45:17,0,92	0/0:5,0:4:6.46:0,6,49	0/0:13,0:7:8.61:0,9,67	0/1:9,4:10:30.21:173,0,30	0/1:8,1:6:2.34:25,0,2	./.	./.	0/0:12,1:2:3.01:0,3,35	0/0:1,2:1:0:0,0,0	0/0:1,1:2:2.97:0,3,20	0/0:4,2:4:2.96:0,3,37	1/1:2,2:3:2.97:20,3,0	0/1:4,1:3:14.46:14,0,32	0/1:10,1:6:10.94:11,0,34	0/1:2,1:3:20.23:37,0,20	./.	0/0:5,2:3:0:0,0,0	0/0:2,0:9:2.94:0,3,18	./.	0/0:19,0:7:6.59:0,7,34	./.	1/1:3,1:2:3.01:49,3,0	0/0:2,0:2:2.94:0,3,24	./.
chr10	61470366	.	AGAG	A	175.84	PASS	AB=0.943;AC=17;AF=0.327;AN=52;BaseQRankSum=3.912;DP=341;FS=10.195;HRun=0;HaplotypeScore=63.9985;InbreedingCoeff=-0.0580;MQ=38.40;MQ0=34;MQRankSum=3.123;QD=1.03;ReadPosRankSum=-3.324;VQSLOD=-0.3872;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:16,0:14:2.53:3,0,197	0/0:4,0:2:0.77:0,1,30	0/0:9,0:1:3:0,3,28	0/0:13,0:2:3.48:0,3,48	0/0:21,0:15:17.72:0,18,127	0/0:5,0:5:6.28:0,6,39	0/1:7,0:7:21.57:22,0,22	0/0:30,0:26:71.99:0,72,899	0/1:13,0:10:26.57:27,0,120	0/1:10,2:11:25.90:39,0,26	1/1:9,2:10:9.54:40,10,0	0/1:14,4:7:20.33:20,0,61	1/1:10,0:7:1.94:7,2,0	0/1:7,2:9:11.37:11,0,37	0/1:20,0:18:43.03:43,0,85	0/1:15,0:13:12.12:12,0,16	0/0:13,0:12:8.87:0,9,109	0/0:18,0:13:29.79:0,30,367	0/0:12,0:11:12.59:0,13,356	0/1:12,0:9:2.40:48,0,2	1/1:9,3:9:8.04:34,8,0	./.	0/0:11,0:7:12.32:0,12,67	0/0:17,0:5:7.52:0,8,68	0/1:6,1:5:6.13:6,0,26	0/1:8,0:6:9.29:9,0,107	0/0:4,0:4:2.90:0,3,18	./.
chr10	61470369	.	G	GGA	1605.71	PASS	AB=0.891;AC=25;AF=0.481;AN=52;BaseQRankSum=0.947;DP=353;FS=6.208;HRun=0;HaplotypeScore=60.3233;InbreedingCoeff=0.3321;MQ=39.27;MQ0=32;MQRankSum=1.902;QD=8.50;ReadPosRankSum=-1.670;VQSLOD=1.8829;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:16,0:15:3.86:4,0,235	1/1:4,0:2:2.94:49,3,0	0/0:9,0:1:2.96:0,3,19	0/0:13,0:2:3.01:0,3,35	0/0:19,0:16:18.02:0,18,219	0/0:6,0:6:3.72:0,4,49	0/0:8,0:8:2.34:0,2,7	0/0:29,0:24:16.62:0,17,227	0/1:14,1:14:74.16:86,0,74	1/1:12,0:11:16.18:290,16,0	1/1:13,0:12:15.04:231,15,0	1/1:18,0:7:12.25:196,12,0	1/1:10,0:7:4.68:92,5,0	1/1:9,0:9:11.87:150,12,0	0/1:7,13:18:33.83:123,0,34	1/1:9,7:14:8.10:136,8,0	0/0:6,7:12:8.93:0,9,63	0/0:20,0:15:27.38:0,27,402	0/1:12,0:11:29.41:29,0,134	1/1:12,0:9:8.99:107,9,0	1/1:12,0:9:9.03:154,9,0	./.	0/0:11,0:7:0.87:0,1,20	0/0:16,0:5:6.57:0,7,41	1/1:7,0:5:0.23:47,0,0	0/1:11,0:9:12.41:77,0,12	0/0:2,3:5:2.66:0,3,33	./.
chr10	61470372	.	AAAGG	A	806.06	PASS	AC=6;AF=0.115;AN=52;BaseQRankSum=-4.665;DP=349;FS=7.698;HRun=0;HaplotypeScore=67.2689;InbreedingCoeff=0.5802;MQ=41.81;MQ0=29;MQRankSum=2.823;QD=13.90;ReadPosRankSum=0.894;VQSLOD=2.0336;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:16,1:16:17.98:247,18,0	0/0:5,0:3:8.96:0,9,126	./.	0/0:13,0:2:0:0,0,0	1/1:9,13:19:4:189,4,0	0/0:6,0:6:14.91:0,15,156	0/0:12,0:12:20.55:0,21,321	0/0:30,0:25:15.78:0,16,167	0/0:16,0:13:12.43:0,12,145	0/0:11,0:11:18.06:0,18,288	0/0:13,0:12:21.96:0,22,348	0/0:17,0:7:15.03:0,15,216	0/0:8,0:6:6.02:0,6,97	0/0:9,0:9:9.03:0,9,163	0/0:23,0:21:25.44:0,25,362	0/0:13,0:13:12.03:0,12,187	0/0:10,0:10:3.01:0,3,48	1/1:19,0:15:36.08:496,36,0	0/0:10,0:9:3.01:0,3,53	0/0:12,0:9:9.02:0,9,126	0/0:8,0:6:12.04:0,12,192	0/0:10,0:9:3.01:0,3,52	0/0:12,0:8:20.98:0,21,240	0/0:14,0:4:2.96:0,3,19	0/0:8,0:6:9.03:0,9,127	0/0:11,0:10:12.04:0,12,198	0/0:5,0:5:5.89:0,6,64	./.
chr10	61470624	.	TACTG	T	10566.90	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=12.366;DP=491;FS=28.508;HRun=0;HaplotypeScore=114.4849;InbreedingCoeff=0.9124;MQ=72.04;MQ0=0;MQRankSum=-9.456;QD=28.25;ReadPosRankSum=2.927;VQSLOD=2.9883;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,102,2500	1/1:1,5:6:3.01:56,3,0	0/0:20,0:20:51.14:0,51,1108	0/0:21,0:20:47.06:0,47,1140	0/0:21,0:21:54.06:0,54,1224	1/1:3,18:21:42.10:728,42,0	1/1:1,15:15:30.10:525,30,0	1/1:5,26:29:68.98:1001,69,0	1/1:1,10:11:18.06:336,18,0	1/1:1,12:13:29.91:383,30,0	1/1:1,7:8:9.02:119,9,0	1/1:1,28:29:57.18:1004,57,0	1/1:3,20:23:30.09:529,30,0	1/1:3,16:19:21.07:392,21,0	1/1:2,15:17:30.09:495,30,0	1/1:0,17:17:39.13:710,39,0	1/1:2,18:20:36.12:671,36,0	0/0:19,0:19:57.20:0,57,1519	1/1:2,8:10:21.05:359,21,0	1/1:0,24:24:20.99:319,21,0	1/1:1,16:17:24.08:447,24,0	1/1:12,7:16:24.07:416,24,0	1/1:1,11:11:15.05:241,15,0	1/1:3,12:15:24.95:398,25,0	1/1:2,8:10:15.04:233,15,0	1/1:1,19:20:44.91:589,45,0	1/1:1,11:12:27.09:503,27,0	1/1:1,2:3:6.02:112,6,0
chr10	61470727	.	A	AT	2220.43	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-1.456;DP=516;FS=4.169;HRun=3;HaplotypeScore=111.6487;InbreedingCoeff=0.9785;MQ=51.70;MQ0=4;MQRankSum=0.137;QD=28.11;ReadPosRankSum=0.946;VQSLOD=2.9325;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:63.17:0,63,742	0/0:12,0:11:30.09:0,30,360	0/0:9,0:8:21:0,21,219	0/0:7,0:7:12.04:0,12,144	0/0:20,0:20:53.98:0,54,632	1/1:2,12:14:24.08:336,24,0	1/1:2,9:10:27.09:377,27,0	0/0:32,0:27:75.21:0,75,887	1/1:1,6:6:15.05:210,15,0	0/0:15,0:14:21.06:0,21,252	0/0:15,0:15:36.11:0,36,430	0/0:29,0:27:42.12:0,42,492	0/0:27,0:23:30.09:0,30,360	0/0:16,0:16:21.06:0,21,252	0/0:26,0:26:33.09:0,33,384	0/0:30,0:27:42.13:0,42,503	0/0:16,0:16:33.10:0,33,395	0/0:22,0:22:54.16:0,54,647	0/0:11,0:9:18.04:0,18,205	0/0:24,0:24:54.17:0,54,647	0/0:17,0:17:15:0,15,180	1/1:2,16:18:39.09:524,39,0	1/1:1,8:10:24.08:332,24,0	1/1:0,19:19:45.15:629,45,0	0/0:14,0:13:27.08:0,27,324	0/0:29,0:27:54.16:0,54,648	0/0:29,0:27:39.12:0,39,468	0/0:7,0:7:15.05:0,15,180
chr10	61470743	.	T	TGG	1464.60	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-8.571;DP=477;FS=7.495;HRun=8;HaplotypeScore=128.6113;InbreedingCoeff=0.8994;MQ=56.94;MQ0=1;MQRankSum=1.698;QD=17.44;ReadPosRankSum=0.097;VQSLOD=1.1376;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,23:30:48.16:754,48,0	0/0:11,0:10:26.85:0,27,291	0/0:13,0:14:19.68:0,20,256	0/0:12,0:11:23.80:0,24,210	1/1:7,13:20:32.60:501,33,0	0/0:12,0:12:21.03:0,21,234	0/0:15,0:15:33.07:0,33,368	0/0:2,0:24:53.95:0,54,229	1/1:2,0:8:12.48:43,12,0	0/0:18,0:18:33.02:0,33,344	0/0:12,0:12:26.91:0,27,294	0/0:23,0:23:27.02:0,27,293	0/0:25,0:21:24.06:0,24,262	0/0:13,0:13:5.78:0,6,65	0/0:21,0:21:17.87:0,18,196	0/0:21,0:21:24.06:0,24,259	0/0:12,0:12:17.41:0,17,171	1/1:7,0:24:19.28:324,19,0	0/0:6,0:6:12.03:0,12,130	0/0:22,0:22:41.47:0,41,435	0/0:15,0:15:5.20:0,5,92	0/0:18,0:18:33.06:0,33,368	0/0:12,0:12:30.08:0,30,334	0/0:21,0:21:42.11:0,42,468	0/0:16,0:16:34.82:0,35,362	0/0:25,0:23:32.05:0,32,352	0/0:18,0:18:11.76:0,12,130	0/0:6,0:6:15.04:0,15,164
chr10	61470928	.	CA	C	975.84	PASS	AC=12;AF=0.231;AN=52;BaseQRankSum=1.680;DP=630;FS=4.087;HRun=2;HaplotypeScore=114.4774;InbreedingCoeff=0.8782;MQ=23.99;MQ0=171;MQRankSum=-1.635;QD=8.71;ReadPosRankSum=-0.031;VQSLOD=1.1534;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:34:57.18:0,57,833	0/0:10,0:6:15.03:0,15,149	./.	./.	0/0:29,0:24:48.12:0,48,694	1/1:1,15:12:15.05:194,15,0	1/1:11,8:10:18.02:214,18,0	0/0:25,0:16:45.02:0,45,406	1/1:2,14:11:21.07:272,21,0	0/0:28,0:22:54.01:0,54,492	0/0:16,0:14:27.06:0,27,278	0/0:25,0:21:39.08:0,39,388	0/0:24,0:18:39.08:0,39,400	0/0:27,0:19:48.10:0,48,482	0/0:35,0:26:48.10:0,48,480	0/0:31,0:28:51.10:0,51,509	0/0:24,0:5:9.02:0,9,90	0/0:39,0:21:36.12:0,36,539	0/0:15,0:10:24:0,24,216	0/0:30,0:24:42.09:0,42,425	0/0:32,0:3:3.01:0,3,45	1/1:3,20:15:21.07:272,21,0	1/1:4,13:7:12.04:155,12,0	1/1:19,2:2:3.01:39,3,0	0/0:27,0:23:45.09:0,45,452	0/0:16,0:10:24.03:0,24,226	0/0:27,0:25:51.09:0,51,505	0/0:6,0:2:6.01:0,6,60
chr10	61470956	.	C	CT	1292.17	PASS	AC=10;AF=0.192;AN=52;BaseQRankSum=1.339;DP=652;FS=11.770;HRun=3;HaplotypeScore=155.1672;InbreedingCoeff=0.9108;MQ=30.72;MQ0=111;MQRankSum=-7.048;QD=13.19;ReadPosRankSum=-3.828;VQSLOD=0.8911;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:40:84.09:0,84,937	0/0:10,0:7:14.77:0,15,95	./.	./.	0/0:28,0:23:51.15:0,51,609	1/1:5,15:16:21.07:278,21,0	1/1:7,10:13:27:319,27,0	0/0:39,0:29:73.38:0,73,442	0/0:22,0:16:27.01:0,27,305	0/0:30,0:26:29.95:0,30,234	0/0:18,0:16:35.29:0,35,232	0/0:17,0:15:12.37:0,12,166	0/0:22,0:21:37.92:0,38,228	0/0:26,0:20:43.95:0,44,274	0/0:33,0:27:28.76:0,29,264	0/0:27,0:24:33.84:0,34,272	0/0:24,0:13:23.44:0,23,142	0/0:31,0:24:39.12:0,39,467	0/0:15,0:8:16.87:0,17,94	0/0:36,0:31:15.62:0,16,231	0/0:13,0:3:2.96:0,3,19	1/1:9,16:17:33.06:412,33,0	1/1:5,14:11:23.99:292,24,0	1/1:11,6:7:12.04:159,12,0	0/0:20,0:18:35.43:0,35,226	0/0:20,0:15:34.74:0,35,201	0/0:31,0:31:72.65:0,73,427	0/0:6,0:3:5.93:0,6,40
chr10	61471163	.	GA	G	14378.05	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=6.196;DP=712;FS=8.171;HRun=8;HaplotypeScore=72.2492;InbreedingCoeff=0.9957;MQ=75.22;MQ0=0;MQRankSum=-2.969;QD=24.21;ReadPosRankSum=0.895;VQSLOD=5.4605;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:93.27:0,93,1109	1/1:0,9:9:24.04:232,24,0	0/0:21,0:21:42.11:0,42,471	0/0:15,0:14:18.03:0,18,184	0/0:33,0:33:90.20:0,90,1055	1/1:2,32:33:75.12:724,75,0	1/1:0,18:18:48.08:464,48,0	1/1:7,31:38:90.05:847,90,0	1/1:5,25:29:66.10:636,66,0	1/1:4,34:38:99:984,102,0	1/1:1,26:27:66.10:637,66,0	1/1:4,26:30:72.11:695,72,0	1/1:0,22:22:63.10:608,63,0	1/1:2,20:22:60.09:578,60,0	1/1:3,30:33:81.12:782,81,0	1/1:8,20:28:60.09:579,60,0	1/1:2,23:25:63.09:607,63,0	0/0:18,0:18:54.15:0,54,639	1/1:3,25:28:75.01:705,75,0	1/1:0,21:21:57.09:550,57,0	1/1:5,15:20:45.06:435,45,0	1/1:1,24:25:63.10:608,63,0	1/1:3,26:29:66.10:637,66,0	1/1:1,12:13:36.06:348,36,0	1/1:4,23:27:60.09:579,60,0	1/1:0,20:20:60.10:579,60,0	1/1:1,50:51:99:1390,144,0	1/1:0,6:6:18.03:174,18,0
chr10	61471701	.	C	CTTT	4658.08	PASS	AB=0.764;AC=37;AF=0.661;AN=56;BaseQRankSum=-2.025;DP=397;FS=16.040;HRun=13;HaplotypeScore=86.5051;InbreedingCoeff=0.5751;MQ=62.96;MQ0=1;MQRankSum=-0.081;QD=16.52;ReadPosRankSum=-6.161;VQSLOD=0.2983;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:8,0:21:28.72:29,0,42	1/1:3,0:3:6:64,6,0	1/1:5,0:6:0.85:6,1,0	0/1:3,0:3:0:0,0,0	0/1:13,0:27:35.95:81,0,36	0/0:19,0:21:47.59:0,48,467	0/0:11,0:13:23.79:0,24,229	0/1:17,0:28:24.69:25,0,47	0/0:5,0:16:29.77:0,30,215	1/1:5,3:15:31.26:359,31,0	1/1:14,2:19:10.19:509,10,0	1/1:14,1:14:19.60:261,20,0	1/1:3,5:11:18.04:272,18,0	1/1:6,4:10:25.64:382,26,0	1/1:11,2:14:24.35:340,24,0	1/1:1,3:6:12.02:167,12,0	1/1:3,8:14:15.92:239,16,0	0/0:13,0:15:25.26:0,25,273	1/1:5,8:17:31.27:375,31,0	1/1:12,1:15:36.10:541,36,0	1/1:7,4:12:6.90:74,7,0	0/0:15,0:18:38.59:0,39,366	0/0:10,0:10:11.79:0,12,129	0/0:19,0:21:34.24:0,34,369	1/1:6,3:10:20.05:239,20,0	0/1:10,0:14:26.91:115,0,27	1/1:8,4:16:39.04:513,39,0	1/1:1,0:5:8.97:68,9,0
chr10	61471755	.	TACACAC	T	1294.84	PASS	AB=0.939;AC=41;AF=0.820;AN=50;BaseQRankSum=1.713;DP=277;FS=0.000;HRun=0;HaplotypeScore=82.8612;InbreedingCoeff=0.0663;MQ=73.47;MQ0=11;MQRankSum=-1.203;QD=6.51;ReadPosRankSum=1.882;VQSLOD=0.8745;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:12,0:11:3:25,3,0	0/1:2,0:2:2.30:38,0,2	./.	0/0:24,0:17:0.47:0,0,1	0/1:8,0:9:13.92:40,0,14	1/1:12,0:13:8.05:75,8,0	1/1:17,0:17:3.01:42,3,0	0/0:20,0:20:0.94:0,1,2	0/1:10,0:11:13.02:36,0,13	1/1:5,0:5:1.75:51,2,0	1/1:6,2:10:5.80:102,6,0	1/1:3,0:4:3.01:42,3,0	1/1:3,1:4:3.01:61,3,0	0/0:3,0:4:2.94:0,3,18	1/1:3,2:5:6.01:62,6,0	1/1:5,0:5:0.47:1,0,0	1/1:8,2:11:9.01:143,9,0	1/1:11,1:13:2.77:60,3,0	1/1:1,0:2:3.01:42,3,0	1/1:6,1:7:3.01:60,3,0	./.	1/1:20,0:20:12.03:133,12,0	1/1:12,0:11:2.97:11,3,0	1/1:12,0:11:3:28,3,0	1/1:5,4:8:12.03:206,12,0	1/1:6,1:8:4.77:100,5,0	1/1:5,0:5:3.01:42,3,0	./.
chr10	61471787	.	CACACACACACACACACAT	C	1873.53	PASS	AB=1.000;AC=18;AF=0.321;AN=56;BaseQRankSum=2.831;DP=337;FS=1.642;HRun=0;HaplotypeScore=144.7252;InbreedingCoeff=0.3941;MQ=47.41;MQ0=22;MQRankSum=-1.407;QD=14.87;ReadPosRankSum=-3.822;VQSLOD=1.5460;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:17:36.02:0,36,1145	0/0:7,0:6:2.13:0,2,240	0/0:8,0:2:3.78:0,4,10	0/0:14,0:3:4.24:0,4,27	0/0:18,0:16:39.10:0,39,1719	1/1:14,2:16:24.51:609,25,0	1/1:6,7:12:6:178,6,0	0/0:32,0:30:74.07:0,74,899	0/1:8,0:6:35.04:40,0,35	0/0:15,0:15:45.06:0,45,1325	0/1:12,0:12:12.54:13,0,333	0/1:6,0:6:2.94:3,0,94	0/1:6,0:6:4.27:4,0,103	0/0:7,0:7:1.46:0,1,509	0/0:7,0:7:9.03:0,9,364	0/1:5,0:5:7.72:8,0,101	0/0:17,0:17:35.90:0,36,1219	0/0:14,0:13:33.20:0,33,903	0/0:13,0:13:31.41:0,31,589	0/0:8,0:8:9.03:0,9,329	1/1:3,0:2:0.89:2,1,0	1/1:9,9:17:15.05:675,15,0	1/1:5,10:13:8.65:253,9,0	1/1:11,1:11:14.81:250,15,0	0/0:10,0:7:15.05:0,15,635	0/0:14,0:14:36.11:0,36,1006	0/1:12,0:10:4.70:5,0,390	0/0:7,0:7:18.06:0,18,661
chr10	61471821	.	A	AATATAT	5615.27	PASS	AB=1.000;AC=36;AF=0.667;AN=54;BaseQRankSum=-0.716;DP=303;FS=1.152;HRun=0;HaplotypeScore=84.2064;InbreedingCoeff=0.6878;MQ=78.73;MQ0=0;MQRankSum=-6.686;QD=28.65;ReadPosRankSum=-1.187;VQSLOD=4.3182;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:54.13:0,54,974	1/1:1,3:4:9.03:291,9,0	0/1:11,0:9:5.47:5,0,113	0/1:21,0:16:15.67:16,0,159	0/0:19,0:19:48.16:0,48,1016	0/0:17,0:17:39.10:0,39,790	./.	1/1:7,0:38:62.80:852,63,0	0/0:7,0:6:12:0,12,213	1/1:3,3:7:12.04:337,12,0	1/1:4,8:14:9.01:224,9,0	1/1:1,2:5:6.02:158,6,0	1/1:0,4:4:6.02:188,6,0	1/1:3,4:8:12.04:330,12,0	1/1:4,2:7:14.99:307,15,0	1/1:2,4:6:6.02:174,6,0	1/1:3,7:10:9.03:306,9,0	0/0:9,0:9:24.03:0,24,438	1/1:1,10:11:30.10:955,30,0	1/1:3,2:6:3.01:85,3,0	1/1:0,1:1:3.01:75,3,0	0/0:11,0:11:15.05:0,15,300	0/0:10,0:10:6.02:0,6,133	0/0:10,0:10:27.08:0,27,514	1/1:2,4:8:12.04:350,12,0	1/1:4,1:11:23.98:313,24,0	1/1:2,9:13:15.05:449,15,0	1/1:0,0:11:15.88:200,16,0
chr10	61472352	.	T	TA	10502.72	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-6.225;DP=604;FS=0.939;HRun=9;HaplotypeScore=67.8244;InbreedingCoeff=0.9703;MQ=76.10;MQ0=0;MQRankSum=-1.732;QD=21.43;ReadPosRankSum=1.781;VQSLOD=5.7389;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:79.26:0,79,689	1/1:1,5:6:15.04:166,15,0	0/0:17,0:15:20.85:0,21,175	0/0:21,1:19:22.79:0,23,173	0/0:35,0:35:86.96:0,87,755	1/1:14,0:14:37.50:154,37,0	1/1:11,0:11:16.07:66,16,0	1/1:14,30:43:84.18:901,84,0	1/1:21,0:21:43.91:195,44,0	1/1:4,26:30:78:843,78,0	1/1:4,27:31:75.20:823,75,0	1/1:3,16:19:42.11:465,42,0	1/1:2,22:24:51.14:564,51,0	1/1:6,12:18:7.03:306,7,0	1/1:1,13:14:33.09:365,33,0	1/1:3,15:18:30.08:332,30,0	1/1:1,18:19:45.12:498,45,0	0/0:8,0:8:24:0,24,208	1/1:7,28:35:84.20:916,84,0	1/1:5,18:24:54.13:586,54,0	1/1:1,10:11:27.07:299,27,0	1/1:15,0:15:24.11:99,24,0	1/1:22,0:22:53.80:224,54,0	1/1:14,0:14:26.78:110,27,0	1/1:2,25:27:63.17:697,63,0	1/1:1,23:24:69.17:753,69,0	1/1:4,27:32:75.92:810,76,0	1/1:1,16:17:30.08:332,30,0
chr10	61472359	.	A	AAAC	2392.04	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-5.906;DP=599;FS=2.013;HRun=0;HaplotypeScore=119.8890;InbreedingCoeff=0.9916;MQ=73.07;MQ0=1;MQRankSum=-2.309;QD=25.45;ReadPosRankSum=3.623;VQSLOD=4.0205;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:90.11:0,90,1318	0/0:5,0:5:12.88:0,13,47	0/0:14,0:12:26.88:0,27,371	0/0:23,0:18:30.16:0,30,316	0/0:32,0:32:96.30:0,96,1436	1/1:1,0:16:41.95:355,42,0	1/1:1,0:10:17.98:153,18,0	0/0:42,0:41:88.20:0,88,453	1/1:0,19:19:48.16:1024,48,0	0/0:31,0:31:82.79:0,83,398	0/0:30,0:30:69.59:0,70,279	0/0:17,0:17:36.25:0,36,133	0/0:27,0:27:55.84:0,56,266	0/0:14,0:14:31.96:0,32,164	0/0:16,0:16:37.57:0,38,185	0/0:15,0:15:25.96:0,26,95	0/0:20,0:20:44.64:0,45,195	0/0:9,0:9:24.08:0,24,374	0/0:33,0:33:75.40:0,75,312	0/0:20,0:20:52.29:0,52,224	0/0:11,0:11:26.27:0,26,112	1/1:2,0:13:35.39:270,35,0	1/1:0,0:25:62.54:524,63,0	1/1:1,0:11:29.97:254,30,0	0/0:30,0:30:69.54:0,70,337	0/0:29,0:29:69.38:0,69,316	0/0:31,0:32:60.46:0,60,264	0/0:21,0:21:37.63:0,38,192
chr10	61473451	.	GA	G	915.21	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=6.188;DP=707;FS=1.322;HRun=7;HaplotypeScore=78.4707;InbreedingCoeff=0.7357;MQ=73.35;MQ0=0;MQRankSum=-0.869;QD=16.64;ReadPosRankSum=3.184;VQSLOD=3.6752;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,117,1455	0/0:9,0:9:24.08:0,24,302	0/0:15,0:13:11.88:0,12,200	0/1:14,0:13:1.89:2,0,165	0/0:26,0:26:75.24:0,75,938	0/0:18,0:18:39.12:0,39,490	0/0:17,0:17:39.11:0,39,475	0/0:37,0:37:99:0,105,1288	1/1:3,38:41:99:1010,99,0	0/0:23,0:23:66.21:0,66,823	0/0:19,0:19:57.12:0,57,664	0/0:25,0:25:66.20:0,66,816	0/0:25,0:25:75.24:0,75,942	0/0:22,0:22:60.19:0,60,754	0/0:46,0:46:99:0,129,1609	0/0:34,1:35:62.67:0,63,1085	0/0:21,0:21:63.19:0,63,777	0/0:14,0:14:42.12:0,42,510	0/0:29,0:29:72.23:0,72,906	0/0:35,0:35:96.25:0,96,1167	0/0:24,0:24:57.17:0,57,706	0/0:20,0:20:57.18:0,57,716	0/0:21,0:21:54.14:0,54,666	0/0:30,0:30:78.25:0,78,981	0/0:35,0:35:99:0,99,1217	0/0:19,0:19:51.16:0,51,630	0/0:32,0:32:90.26:0,90,1106	0/0:14,0:14:36.12:0,36,452
chr10	61473491	.	T	TGCTTC	6987.03	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-5.208;DP=678;FS=3.314;HRun=0;HaplotypeScore=123.8568;InbreedingCoeff=0.9988;MQ=77.28;MQ0=1;MQRankSum=-9.593;QD=67.84;ReadPosRankSum=-1.686;VQSLOD=5.8259;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:84.29:0,84,1727	0/0:7,0:7:21.07:0,21,435	0/0:25,0:25:57.19:0,57,1071	0/0:23,0:23:59.39:0,59,1049	0/0:20,0:20:54.15:0,54,1030	1/1:3,17:22:48.16:1359,48,0	1/1:9,12:21:54.18:1498,54,0	0/0:35,0:35:96.31:0,96,1899	0/0:35,0:35:93.31:0,93,1865	0/0:22,0:22:63.21:0,63,1236	0/0:13,0:13:39.13:0,39,798	0/0:31,0:31:90.31:0,90,1866	0/0:26,0:26:75.24:0,75,1517	0/0:27,0:27:75.26:0,75,1555	0/0:52,0:52:99:0,150,3030	0/0:31,0:31:87.28:0,87,1753	0/0:22,0:22:63.22:0,63,1293	0/0:11,0:11:33.11:0,33,662	0/0:24,0:24:57.19:0,57,1113	0/0:23,0:23:66.23:0,66,1343	0/0:22,0:22:63.22:0,63,1304	1/1:1,16:17:42.13:1214,42,0	1/1:2,11:14:30.10:853,30,0	1/1:4,24:28:69.24:2063,69,0	0/0:25,0:25:75.25:0,75,1507	0/0:24,0:23:63.21:0,63,1271	0/0:31,0:31:93.31:0,93,1891	0/0:15,0:15:45.15:0,45,933
chr10	61474538	.	AATG	A	12197.24	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=11.486;DP=502;FS=6.887;HRun=0;HaplotypeScore=82.6353;InbreedingCoeff=0.9893;MQ=81.09;MQ0=0;MQRankSum=-3.635;QD=40.52;ReadPosRankSum=3.094;VQSLOD=6.1540;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:42.14:0,42,937	1/1:1,8:9:18.06:307,18,0	0/0:15,0:15:45.15:0,45,1005	0/0:14,0:14:30.10:0,30,589	0/0:19,0:19:57.20:0,57,1312	0/0:25,0:25:69.24:0,69,1542	0/0:12,0:12:33.11:0,33,761	0/0:29,0:29:84.29:0,84,1901	0/0:22,0:22:57.20:0,57,1291	1/1:0,16:16:48.16:819,48,0	1/1:0,19:19:27.09:461,27,0	1/1:0,20:20:51.17:870,51,0	1/1:0,29:30:84.29:1432,84,0	1/1:0,29:29:72.25:1228,72,0	1/1:1,30:31:75.26:1279,75,0	1/1:2,20:22:48.16:818,48,0	1/1:0,17:17:42.14:716,42,0	0/0:11,0:11:33.10:0,33,641	1/1:2,9:11:27.08:434,27,0	1/1:0,6:6:12.04:205,12,0	1/1:0,15:15:35.63:614,36,0	0/0:7,0:7:21.07:0,21,484	0/0:17,0:17:51.17:0,51,1133	0/0:16,0:16:48.16:0,48,1079	1/1:0,17:17:36.12:614,36,0	1/1:1,21:22:63.16:969,63,0	1/1:2,28:30:72.25:1228,72,0	1/1:0,7:7:12.04:205,12,0
chr10	61476290	.	C	CTT	7084.88	PASS	AB=0.953;AC=42;AF=0.750;AN=56;BaseQRankSum=-1.022;DP=603;FS=28.557;HRun=1;HaplotypeScore=182.6746;InbreedingCoeff=0.0040;MQ=42.76;MQ0=28;MQRankSum=0.621;QD=13.10;ReadPosRankSum=3.149;VQSLOD=0.0435;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:13,0:12:22.90:105,0,23	1/1:10,1:11:13.74:251,14,0	0/0:31,0:8:20.91:0,21,215	0/0:31,0:10:26.70:0,27,242	0/1:17,0:17:42.14:154,0,42	0/1:36,0:36:34.24:326,0,34	1/1:18,0:17:25.45:223,25,0	0/1:52,0:51:96.44:616,0,96	0/1:17,0:17:61.91:84,0,62	0/1:24,1:25:76.78:333,0,77	1/1:21,0:21:39.52:303,40,0	1/1:21,3:23:43.83:392,44,0	1/1:13,1:13:17.34:241,17,0	1/1:26,3:28:47.46:447,47,0	1/1:21,2:23:39.94:318,40,0	1/1:27,3:29:55.89:535,56,0	1/1:22,1:20:21.60:253,22,0	1/1:11,0:9:0.97:150,1,0	0/1:18,0:16:99:118,0,128	1/1:27,9:34:65.29:530,65,0	1/1:9,0:4:7.18:43,7,0	0/1:19,0:18:54.89:258,0,55	1/1:12,0:12:20.30:214,20,0	0/1:6,9:12:33.20:41,0,33	1/1:8,2:10:18.02:151,18,0	0/1:34,2:34:14.35:523,0,14	1/1:16,3:18:41.13:422,41,0	1/1:3,0:3:6:53,6,0
chr10	61476317	.	TCACACACACACACA	T	5282.95	PASS	AB=0.788;AC=24;AF=0.444;AN=54;BaseQRankSum=2.670;DP=476;FS=1.289;HRun=0;HaplotypeScore=248.4179;InbreedingCoeff=0.2247;MQ=34.33;MQ0=17;MQRankSum=-4.688;QD=17.91;ReadPosRankSum=0.958;VQSLOD=3.5427;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:10:5.40:0,5,382	1/1:5,2:7:1.71:116,2,0	0/0:9,0:4:12.04:0,12,611	0/0:13,0:5:15.05:0,15,958	0/0:17,0:17:21.07:0,21,1293	0/0:36,0:38:36.63:0,37,1784	0/0:16,0:14:3.90:0,4,194	0/1:31,0:32:99:139,0,136	0/0:16,0:18:28.67:0,29,1277	0/1:12,6:21:16.04:902,0,16	1/1:8,3:12:9.03:264,9,0	0/1:15,6:20:7.36:342,0,7	0/1:9,4:13:92.28:454,0,92	0/1:15,3:18:6.67:420,0,7	1/1:10,7:19:12.82:291,13,0	1/1:19,4:22:15.94:468,16,0	1/1:13,5:15:3.01:118,3,0	0/0:11,0:10:24.08:0,24,1085	0/1:11,2:12:16.85:286,0,17	1/1:20,8:28:1.97:284,2,0	1/1:9,1:5:0.89:2,1,0	0/0:20,0:20:35.58:0,36,1903	0/0:11,0:11:9.92:0,10,380	0/0:17,0:15:13.87:0,14,825	1/1:5,3:8:6.02:169,6,0	0/1:21,5:25:99:639,0,114	0/1:8,9:18:83.07:391,0,83	./.
chr10	61476393	.	ACAGAGACAGG	A	4575.30	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=9.120;DP=534;FS=11.999;HRun=0;HaplotypeScore=186.2436;InbreedingCoeff=0.9312;MQ=57.94;MQ0=3;MQRankSum=-10.246;QD=33.89;ReadPosRankSum=-1.181;VQSLOD=3.4742;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,14:19:9.03:245,9,0	0/0:11,0:11:30.10:0,30,1290	0/0:40,0:29:72.01:0,72,2843	0/0:31,0:23:47.76:0,48,1650	1/1:5,12:17:33.11:777,33,0	1/1:5,11:16:39.03:1042,39,0	1/1:3,11:14:6.02:150,6,0	0/0:32,0:31:72.24:0,72,2822	1/1:3,10:13:24.08:716,24,0	0/0:20,0:20:36.12:0,36,1555	0/0:25,0:25:53.92:0,54,2601	0/0:16,0:16:36.12:0,36,1445	0/0:10,0:10:27.09:0,27,1023	0/0:20,0:20:51.18:0,51,2226	0/0:16,0:16:33.05:0,33,1480	0/0:18,0:18:48.16:0,48,2150	0/0:26,0:26:51.18:0,51,2538	1/1:7,0:7:6.02:126,6,0	0/0:15,0:15:30.10:0,30,1348	0/0:34,0:34:78.27:0,78,3766	0/0:11,0:11:27.09:0,27,1327	1/1:8,6:14:18.06:443,18,0	1/1:1,16:17:33.11:870,33,0	1/1:8,10:18:9.97:205,10,0	0/0:25,0:25:63.22:0,63,2979	0/0:23,0:23:54.19:0,54,2517	0/0:23,0:23:56.85:0,57,2773	0/0:2,0:2:6.02:0,6,309
chr10	61476491	.	CA	C	11917.77	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-5.214;DP=589;FS=10.280;HRun=5;HaplotypeScore=76.6752;InbreedingCoeff=0.9985;MQ=69.50;MQ0=0;MQRankSum=-2.972;QD=30.33;ReadPosRankSum=3.106;VQSLOD=5.1299;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:57.17:0,57,762	1/1:1,8:9:21.06:238,21,0	0/0:18,0:18:48.37:0,48,577	0/0:11,0:11:24.08:0,24,327	0/0:26,0:26:75.25:0,75,1024	0/0:22,0:22:51.13:0,51,674	0/0:13,0:13:36.12:0,36,491	1/1:6,19:25:69.19:782,69,0	0/0:17,0:17:45.14:0,45,599	1/1:3,18:21:57.11:621,57,0	1/1:0,27:27:72.20:817,72,0	1/1:1,26:27:72.21:816,72,0	1/1:1,15:16:45.13:510,45,0	1/1:1,30:30:84.24:952,84,0	1/1:0,21:21:51.15:578,51,0	1/1:1,16:17:33.09:374,33,0	1/1:0,18:18:54.15:612,54,0	0/0:16,0:16:45.09:0,45,571	1/1:1,24:25:69.17:770,69,0	1/1:3,32:35:90.25:1016,90,0	1/1:2,8:10:24.07:272,24,0	0/0:20,0:20:57.18:0,57,762	0/0:22,0:22:57.15:0,57,758	0/0:12,0:12:24.08:0,24,328	1/1:2,33:35:96.27:1089,96,0	1/1:1,25:26:72.19:805,72,0	1/1:0,25:25:72.21:816,72,0	1/1:0,25:25:75.21:851,75,0
chr10	61476521	.	TA	T	4254.25	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-7.725;DP=618;FS=5.299;HRun=10;HaplotypeScore=102.9083;InbreedingCoeff=0.9984;MQ=77.73;MQ0=0;MQRankSum=0.635;QD=20.26;ReadPosRankSum=1.547;VQSLOD=5.1290;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,18:22:50.89:433,51,0	0/0:9,0:9:27.06:0,27,284	0/0:28,0:27:42.66:0,43,469	0/0:14,0:14:24:0,24,236	1/1:6,20:26:56.97:495,57,0	1/1:3,22:25:47.99:416,48,0	1/1:3,10:13:29.99:260,30,0	1/1:6,17:23:59.96:516,60,0	1/1:2,19:21:47.99:417,48,0	0/0:24,1:25:38.58:0,39,606	0/0:30,0:30:78.18:0,78,845	0/0:28,0:28:66.03:0,66,689	0/0:17,0:17:48.07:0,48,499	0/0:27,0:27:75.14:0,75,812	0/0:19,0:19:45.04:0,45,471	0/0:22,0:22:54.11:0,54,584	0/0:16,1:17:19.07:0,19,438	1/1:1,16:17:44.98:391,45,0	0/0:25,0:25:60.16:0,60,664	0/0:32,0:32:83.88:0,84,890	0/0:11,0:11:33.07:0,33,356	1/1:3,16:19:44.98:391,45,0	1/1:1,25:26:65.53:573,66,0	1/1:0,18:18:41.99:364,42,0	0/0:32,1:33:58.04:0,58,850	0/0:21,0:21:60.16:0,60,657	0/0:27,1:28:43.97:0,44,675	0/0:22,0:22:51.14:0,51,564
chr10	61476644	.	TC	T	7005.05	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=12.682;DP=628;FS=1.881;HRun=3;HaplotypeScore=66.2597;InbreedingCoeff=0.9836;MQ=84.06;MQ0=0;MQRankSum=-6.389;QD=38.92;ReadPosRankSum=3.796;VQSLOD=4.8787;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,34:34:90.30:1258,90,0	0/0:12,0:12:33.11:0,33,527	0/0:26,0:26:72.23:0,72,1114	0/0:18,0:18:50.98:0,51,707	1/1:0,20:20:54.18:755,54,0	1/1:0,20:20:57.19:797,57,0	1/1:0,16:16:45.15:629,45,0	0/0:32,0:32:93.30:0,93,1445	1/1:0,21:21:60.20:839,60,0	0/0:22,0:22:66.22:0,66,1035	0/0:20,0:20:45.15:0,45,704	0/0:19,0:19:57.19:0,57,907	0/0:24,0:24:72.21:0,72,1122	0/0:30,0:30:90.28:0,90,1389	0/0:28,0:28:84.29:0,84,1339	0/0:28,0:28:84.27:0,84,1313	0/0:26,0:26:78.27:0,78,1243	1/1:0,16:16:48.16:671,48,0	0/0:24,0:24:72.23:0,72,1106	0/0:34,0:34:90.31:0,90,1425	0/0:37,0:37:99:0,111,1747	1/1:0,11:11:33.11:461,33,0	1/1:0,20:20:47.98:671,48,0	1/1:0,22:22:66.22:923,66,0	0/0:20,0:20:60.20:0,60,953	0/0:28,0:28:84.29:0,84,1343	0/0:18,0:18:54.18:0,54,863	0/0:2,0:2:6.02:0,6,96
chr10	61479274	.	C	CA	2075.30	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-11.235;DP=459;FS=1.695;HRun=7;HaplotypeScore=43.4687;InbreedingCoeff=0.9738;MQ=79.04;MQ0=0;MQRankSum=-1.641;QD=27.67;ReadPosRankSum=1.079;VQSLOD=4.1010;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:33.05:0,33,319	0/0:6,0:6:15.02:0,15,145	0/0:15,0:15:31.76:0,32,328	0/0:8,0:7:15.01:0,15,137	0/0:30,0:30:81.12:0,81,782	1/1:4,23:27:63.19:761,63,0	1/1:2,3:5:9.03:109,9,0	0/0:32,0:32:75.10:0,75,721	0/0:13,0:13:36.04:0,36,342	0/0:22,0:22:51.07:0,51,492	0/0:20,0:20:54.09:0,54,521	0/0:10,0:10:30.05:0,30,290	0/0:17,0:17:45.07:0,45,434	0/0:14,0:14:39.05:0,39,370	0/0:16,0:16:48.08:0,48,464	0/0:15,0:15:45.07:0,45,435	0/0:29,0:29:80.99:0,81,755	0/0:18,0:18:48.07:0,48,463	0/0:15,0:15:39.05:0,39,372	0/0:20,0:20:57.07:0,57,544	0/0:7,0:7:21.03:0,21,202	1/1:2,15:17:42.13:507,42,0	1/1:2,14:16:42.13:507,42,0	1/1:0,10:10:30.09:362,30,0	0/0:12,0:12:36.04:0,36,340	0/0:25,0:25:75.10:0,75,715	0/0:24,0:24:69.11:0,69,666	0/0:5,0:5:15.02:0,15,145
chr10	61479362	.	CT	C	336.36	PASS	AB=0.606;AC=1;AF=0.018;AN=56;BaseQRankSum=5.757;DP=565;FS=0.000;HRun=4;HaplotypeScore=55.5828;InbreedingCoeff=-0.0184;MQ=86.57;MQ0=0;MQRankSum=-2.037;QD=16.82;ReadPosRankSum=0.609;VQSLOD=2.7397;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:57.19:0,57,797	0/0:8,0:8:24.08:0,24,336	0/0:20,0:20:57.16:0,57,766	0/0:19,0:19:54.18:0,54,726	0/0:29,0:29:87.28:0,87,1203	0/0:26,0:26:63.21:0,63,882	0/0:11,0:11:30.10:0,30,419	0/0:36,0:36:99:0,102,1337	0/0:21,0:21:63.17:0,63,860	0/0:28,0:28:84.28:0,84,1176	0/0:27,0:27:78.23:0,78,1042	0/0:12,0:12:36.12:0,36,504	0/0:16,0:16:48.16:0,48,671	0/0:25,0:25:75.22:0,75,1015	0/0:20,0:20:57.18:0,57,781	0/0:10,0:10:27.09:0,27,378	0/0:25,0:25:66.18:0,66,884	0/0:12,0:12:30.10:0,30,420	0/1:7,13:20:99:411,0,194	0/0:21,0:21:63.19:0,63,850	0/0:15,0:15:45.15:0,45,629	0/0:20,0:20:60.20:0,60,840	0/0:29,0:29:81.22:0,81,1111	0/0:8,0:8:24.07:0,24,320	0/0:22,0:22:60.19:0,60,825	0/0:22,0:22:63.20:0,63,867	0/0:28,0:28:84.28:0,84,1174	0/0:15,0:15:36.12:0,36,498
chr10	61480005	.	A	AC	23350.64	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-6.839;DP=553;FS=10.498;HRun=0;HaplotypeScore=45.2642;InbreedingCoeff=0.9433;MQ=75.74;MQ0=0;MQRankSum=-7.188;QD=43.81;ReadPosRankSum=3.282;VQSLOD=4.4446;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,30:30:87.30:1391,87,0	1/1:0,6:6:18.06:288,18,0	0/0:13,0:13:38.34:0,38,509	0/0:7,0:7:7.15:0,7,199	1/1:0,25:25:75.26:1199,75,0	1/1:0,19:19:45.12:719,45,0	1/1:2,14:16:39.13:624,39,0	1/1:1,45:46:99:2086,132,0	1/1:2,18:20:51.17:815,51,0	1/1:0,16:16:48.16:768,48,0	1/1:0,26:26:78.27:1241,78,0	1/1:0,19:19:45.15:720,45,0	1/1:1,27:28:72.11:1151,72,0	1/1:1,19:20:54.18:863,54,0	1/1:0,22:22:63.21:1007,63,0	1/1:0,19:19:54.18:863,54,0	1/1:0,14:14:39.13:622,39,0	1/1:0,7:7:21.07:335,21,0	1/1:0,13:13:39.13:623,39,0	1/1:1,28:29:81.28:1295,81,0	1/1:0,11:11:24.08:384,24,0	1/1:0,23:23:63.21:1007,63,0	1/1:1,25:26:66.23:1055,66,0	1/1:0,15:15:45.15:719,45,0	1/1:0,16:16:48.16:767,48,0	1/1:1,20:21:60.19:938,60,0	1/1:1,39:39:99:1582,99,0	1/1:0,6:6:18.06:288,18,0
chr10	61480968	.	TCATG	T	37660.22	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-0.875;DP=787;FS=0.513;HRun=0;HaplotypeScore=154.7695;InbreedingCoeff=0.9997;MQ=84.76;MQ0=0;MQRankSum=-11.908;QD=51.73;ReadPosRankSum=7.485;VQSLOD=5.2942;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,51:51:99:2255,114,0	1/1:0,15:15:42.01:751,42,0	0/0:28,0:27:81.22:0,81,1959	0/0:31,0:31:78.75:0,79,2218	1/1:0,26:26:66.18:1340,66,0	1/1:0,16:16:45.11:899,45,0	1/1:0,27:27:69.08:1314,69,0	1/1:0,32:32:93.31:1895,93,0	1/1:0,30:30:78.03:1549,78,0	1/1:0,22:22:66.23:1382,66,0	1/1:0,20:20:45.11:900,45,0	1/1:0,22:22:48.64:1006,49,0	1/1:0,45:45:99:2438,123,0	1/1:0,37:37:99:2050,102,0	1/1:0,41:41:99:2072,105,0	1/1:0,20:20:42.11:838,42,0	1/1:0,29:29:81.28:1698,81,0	1/1:0,23:23:66.15:1298,66,0	1/1:0,17:17:51.18:1068,51,0	1/1:0,25:25:63.02:1146,63,0	1/1:0,58:58:99:2698,135,0	1/1:1,22:23:57.07:1064,57,0	1/1:0,15:15:36.08:711,36,0	1/1:0,36:36:87.30:1823,87,0	1/1:0,17:17:48.08:920,48,0	1/1:1,40:41:99:2470,123,0	1/1:0,28:28:66.23:1383,66,0	1/1:0,12:12:33.11:692,33,0
chr10	61481297	.	A	AC	18668.27	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-12.270;DP=673;FS=2.040;HRun=1;HaplotypeScore=76.7231;InbreedingCoeff=0.9999;MQ=90.21;MQ0=0;MQRankSum=-5.751;QD=44.66;ReadPosRankSum=2.882;VQSLOD=4.7612;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,123,1698	1/1:0,15:15:45.15:719,45,0	0/0:34,0:34:98.80:0,99,1319	0/0:19,0:19:57.13:0,57,762	0/0:28,0:28:81.26:0,81,1113	0/0:22,0:22:66.22:0,66,922	0/0:13,0:13:39.13:0,39,546	1/1:1,30:31:90.31:1435,90,0	0/0:24,0:24:72.24:0,72,1007	1/1:0,26:26:78.27:1245,78,0	1/1:0,17:17:45.15:719,45,0	1/1:0,20:20:60.20:959,60,0	1/1:0,23:23:60.20:959,60,0	1/1:0,23:23:66.23:1055,66,0	1/1:0,33:33:96.33:1533,96,0	1/1:0,25:25:69.24:1103,69,0	1/1:0,20:20:51.17:805,51,0	0/0:11,0:11:33.11:0,33,460	1/1:1,20:21:60.20:956,60,0	1/1:0,34:34:93.32:1486,93,0	1/1:2,37:39:99:1628,102,0	0/0:23,0:23:66.20:0,66,904	0/0:20,0:19:54.18:0,54,754	0/0:19,0:19:57.19:0,57,796	1/1:0,24:24:66.23:1055,66,0	1/1:1,22:23:69.23:1093,69,0	1/1:0,28:27:75.26:1199,75,0	1/1:0,16:16:45.15:719,45,0
chr10	61483728	.	T	TTTA	2373.23	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-8.801;DP=582;FS=0.000;HRun=0;HaplotypeScore=76.0852;InbreedingCoeff=0.9941;MQ=76.29;MQ0=0;MQRankSum=-3.615;QD=55.19;ReadPosRankSum=-2.619;VQSLOD=4.6302;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:87.22:0,87,1488	0/0:6,0:6:18.06:0,18,335	0/0:11,0:11:30.10:0,30,543	0/0:12,0:12:33.10:0,33,576	0/0:26,0:26:78.23:0,78,1378	0/0:26,0:26:75.24:0,75,1364	0/0:12,0:12:36.11:0,36,639	1/1:2,23:26:78.24:1736,78,0	1/1:1,14:17:33.07:759,33,0	0/0:26,0:26:75.25:0,75,1360	0/0:26,0:26:78.24:0,78,1391	0/0:20,0:20:60.21:0,60,1117	0/0:20,0:20:57.20:0,57,1051	0/0:20,0:20:60.21:0,60,1109	0/0:27,0:27:78.22:0,78,1358	0/0:17,0:17:51.15:0,51,917	0/0:13,0:13:39.13:0,39,714	0/0:13,0:13:36.12:0,36,554	0/0:20,0:20:52.35:0,52,826	0/0:36,0:36:99:0,108,1933	0/0:22,0:22:66.19:0,66,1165	0/0:28,0:28:84.27:0,84,1525	0/0:29,0:29:87.26:0,87,1519	0/0:8,0:8:24.08:0,24,447	0/0:19,0:19:57.18:0,57,1024	0/0:25,0:25:75.24:0,75,1337	0/0:30,0:30:87.30:0,87,1618	0/0:18,0:18:48.15:0,48,825
chr10	61486652	.	TA	T	7132.67	PASS	AB=1.000;AC=33;AF=0.589;AN=56;BaseQRankSum=11.335;DP=486;FS=2.636;HRun=8;HaplotypeScore=66.1671;InbreedingCoeff=0.9271;MQ=67.13;MQ0=0;MQRankSum=-0.133;QD=24.68;ReadPosRankSum=3.340;VQSLOD=5.7685;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:16:27.04:0,27,310	1/1:0,12:12:36.06:347,36,0	0/1:9,0:8:13:13,0,104	0/0:15,0:15:42.08:0,42,455	0/0:24,0:23:57.07:0,57,654	0/0:17,0:17:39.12:0,39,471	0/0:13,0:13:39.05:0,39,431	0/0:20,0:20:51.14:0,51,595	0/0:25,0:25:66.19:0,66,786	1/1:5,12:16:36.05:348,36,0	1/1:0,10:10:30.05:290,30,0	1/1:2,17:19:54.09:521,54,0	1/1:2,17:19:48.08:463,48,0	1/1:1,29:30:84.14:811,84,0	1/1:2,13:15:33.05:319,33,0	1/1:1,23:24:69.11:666,69,0	1/1:1,15:16:45.07:435,45,0	0/0:19,0:19:54.17:0,54,652	1/1:0,15:15:45.06:430,45,0	1/1:3,14:17:42.07:406,42,0	1/1:0,7:7:18.02:174,18,0	0/0:12,0:12:32.99:0,33,379	0/0:23,0:23:66.19:0,66,786	0/0:12,0:12:33.09:0,33,388	1/1:2,14:16:36.06:348,36,0	1/1:1,17:18:51.08:493,51,0	1/1:4,32:33:93.12:898,93,0	1/1:2,6:8:18.02:174,18,0
chr10	61490716	.	ACTCC	A	3156.12	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=1.458;DP=381;FS=23.143;HRun=0;HaplotypeScore=73.9426;InbreedingCoeff=0.9347;MQ=67.26;MQ0=0;MQRankSum=-4.469;QD=32.88;ReadPosRankSum=0.454;VQSLOD=1.4986;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,28:31:60.15:1105,60,0	0/0:6,0:6:17.99:0,18,344	0/0:14,0:12:33.08:0,33,586	0/0:8,0:7:9.72:0,10,206	1/1:0,15:16:38.98:617,39,0	0/0:14,0:14:30.01:0,30,383	0/0:21,0:21:50.85:0,51,630	1/1:17,7:24:59.95:703,60,0	1/1:0,0:11:29.58:195,30,0	0/0:12,0:12:29.83:0,30,509	0/0:7,0:7:12.03:0,12,188	0/0:7,0:7:21.07:0,21,479	0/0:16,0:16:45.10:0,45,889	0/0:13,0:13:33.07:0,33,673	0/0:7,0:7:18.05:0,18,361	0/0:10,0:10:27.03:0,27,549	0/0:25,0:25:66.21:0,66,1552	1/1:1,13:14:36.12:710,36,0	0/0:14,0:14:39.03:0,39,660	0/0:9,0:8:18.05:0,18,389	0/0:21,0:21:45.36:0,45,972	0/0:16,0:16:35.81:0,36,561	0/0:9,0:9:24.05:0,24,333	0/0:15,0:15:36.09:0,36,475	0/0:11,0:11:24:0,24,416	0/0:11,0:12:29.99:0,30,482	0/0:14,0:14:33.09:0,33,708	0/0:3,0:3:2.99:0,3,23
chr10	61490718	.	TC	T	1314.42	PASS	AB=0.823;AC=27;AF=0.500;AN=54;BaseQRankSum=6.211;DP=384;FS=24.310;HRun=11;HaplotypeScore=67.0453;InbreedingCoeff=0.3048;MQ=66.30;MQ0=0;MQRankSum=-0.783;QD=5.39;ReadPosRankSum=2.154;VQSLOD=0.3116;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:30:39.96:124,40,0	0/1:4,2:6:9.62:10,0,104	0/0:16,0:14:15.49:0,15,161	0/0:7,1:6:5.32:0,5,53	1/1:16,0:16:19.98:62,20,0	1/1:2,11:15:24.98:179,25,0	1/1:5,15:21:38.75:309,39,0	1/1:21,0:21:13.31:40,13,0	1/1:12,0:12:24.24:75,24,0	0/1:11,2:13:34.23:34,0,81	0/1:6,2:8:37.24:37,0,42	0/1:6,1:7:9.54:10,0,113	0/0:15,1:16:5.42:0,5,254	0/1:12,1:13:3.53:4,0,171	0/1:6,2:8:12.60:13,0,84	0/0:10,0:10:18.05:0,18,192	0/0:22,3:25:30.33:0,30,500	1/1:13,0:13:26.24:80,26,0	0/0:14,0:14:8.79:0,9,111	0/1:8,1:8:9.60:10,0,112	0/0:22,0:22:29.60:0,30,266	1/1:7,9:16:2.78:130,3,0	0/1:2,6:9:11.96:109,0,12	1/1:2,13:15:29.96:246,30,0	0/1:11,1:12:33.97:34,0,81	0/0:10,0:13:11.68:0,12,92	0/0:14,0:14:18.03:0,18,183	./.
chr10	61490904	.	TAA	T	1010.20	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=5.073;DP=317;FS=1.347;HRun=14;HaplotypeScore=44.0819;InbreedingCoeff=0.9027;MQ=82.46;MQ0=2;MQRankSum=1.513;QD=14.86;ReadPosRankSum=1.559;VQSLOD=2.1090;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,12:16:26.73:234,27,0	0/0:2,0:2:3.01:0,3,42	0/0:25,1:17:12.32:0,12,258	0/0:13,0:12:12.27:0,12,73	1/1:0,4:5:14.76:123,15,0	0/0:12,0:13:23.53:0,24,266	0/0:12,0:13:35.59:0,36,441	1/1:9,18:28:53.07:464,53,0	1/1:3,6:9:17.99:166,18,0	0/0:6,0:6:12.04:0,12,166	0/0:4,0:6:15.02:0,15,166	0/0:10,0:11:23.52:0,24,250	0/0:12,0:13:32.58:0,33,404	0/0:9,0:9:20.51:0,21,209	0/0:6,0:7:21.05:0,21,264	0/0:10,0:10:26.09:0,26,307	0/0:19,0:20:53.63:0,54,688	1/1:0,10:10:21.02:194,21,0	0/0:18,0:18:44.82:0,45,515	0/0:6,0:6:9.03:0,9,124	0/0:8,0:8:18.06:0,18,251	0/0:5,0:5:15.01:0,15,185	0/0:4,0:4:12.01:0,12,134	0/0:9,0:10:27.07:0,27,347	0/0:9,0:10:30.09:0,30,399	0/0:9,0:10:26.54:0,27,309	0/0:12,0:13:29.58:0,30,372	0/0:13,0:14:32.60:0,33,426
chr10	61491055	.	TTGGTGG	T	189.14	PASS	AB=1.000;AC=11;AF=0.229;AN=48;BaseQRankSum=-2.779;DP=141;FS=0.000;HRun=0;HaplotypeScore=30.5311;InbreedingCoeff=0.4496;MQ=77.38;MQ0=5;MQRankSum=0.172;QD=6.52;ReadPosRankSum=1.801;VQSLOD=0.9379;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:6,0:6:6.02:80,6,0	./.	0/0:23,0:13:20.89:0,21,275	0/0:12,0:4:3.01:0,3,65	1/1:1,7:8:5.88:41,6,0	0/0:8,0:7:9.08:0,9,25	0/0:5,0:5:8.24:0,8,26	0/0:4,0:3:2.84:0,3,14	1/1:1,0:1:2.96:19,3,0	0/0:4,0:4:4.59:0,5,15	./.	0/0:4,0:4:4.81:0,5,30	0/0:3,0:3:2.29:0,2,6	0/0:5,0:5:7.01:0,7,19	0/0:2,0:2:4.81:0,5,30	0/0:2,0:2:5.49:0,5,34	0/0:9,0:9:12.97:0,13,125	1/1:4,0:4:6.02:78,6,0	0/0:5,0:5:4.74:0,5,16	0/0:2,0:2:1.82:0,2,5	0/0:2,0:2:3.63:0,4,10	0/0:3,0:3:4.55:0,5,29	./.	0/0:7,0:7:9.56:0,10,34	0/1:5,0:5:1.24:1,0,22	1/1:5,0:5:8.99:100,9,0	0/0:3,0:3:2.04:0,2,6	./.
chr10	61493192	.	TGGA	T	3433.48	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=9.357;DP=715;FS=5.565;HRun=0;HaplotypeScore=121.9033;InbreedingCoeff=0.9987;MQ=69.74;MQ0=0;MQRankSum=2.778;QD=28.61;ReadPosRankSum=0.479;VQSLOD=3.8932;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:9,35:44:78.26:1141,78,0	0/0:17,0:17:42.09:0,42,819	0/0:26,0:24:30.45:0,30,620	0/0:29,0:28:32.94:0,33,498	1/1:6,14:20:33.11:483,33,0	0/0:18,0:18:42.12:0,42,784	0/0:32,0:32:75.24:0,75,1482	1/1:7,15:22:45.10:580,45,0	1/1:1,17:18:45.15:658,45,0	0/0:19,0:19:48.16:0,48,958	0/0:19,0:19:39.08:0,39,762	0/0:32,0:32:84:0,84,1639	0/0:22,0:22:57.17:0,57,1095	0/0:31,0:31:81.10:0,81,1538	0/0:37,0:37:87.18:0,87,1673	0/0:34,0:34:84.10:0,84,1568	0/0:36,0:36:81.03:0,81,1508	1/1:1,15:16:39.13:571,39,0	0/0:21,0:21:36.11:0,36,685	0/0:26,0:26:54.18:0,54,1093	0/0:39,0:39:93.32:0,93,1892	0/0:25,0:25:54.06:0,54,982	0/0:17,0:17:39.13:0,39,777	0/0:39,0:39:84.20:0,84,1664	0/0:19,0:19:47.83:0,48,934	0/0:30,0:30:75.26:0,75,1541	0/0:19,0:19:45.15:0,45,901	0/0:7,0:7:21.07:0,21,433
chr10	61495342	.	AACACAC	A	3013.56	PASS	AB=0.746;AC=22;AF=0.423;AN=52;BaseQRankSum=8.257;DP=578;FS=10.572;HRun=0;HaplotypeScore=132.7718;InbreedingCoeff=0.4698;MQ=72.21;MQ0=7;MQRankSum=-6.918;QD=10.50;ReadPosRankSum=-0.653;VQSLOD=1.8324;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:29:1.16:1,0,234	1/1:5,0:6:0.78:4,1,0	./.	./.	0/0:21,0:20:20.97:0,21,436	0/0:23,0:23:50.97:0,51,1400	0/0:21,0:23:36.01:0,36,887	0/0:23,0:23:23.69:0,24,159	1/1:16,0:16:12.04:150,12,0	0/1:16,1:23:50.26:50,0,73	0/0:11,0:14:10.06:0,10,74	1/1:12,9:22:2.99:155,3,0	1/1:13,13:26:9.81:296,10,0	1/1:20,6:26:21.03:357,21,0	0/1:14,10:24:1.99:244,0,2	1/1:10,11:24:30.10:551,30,0	0/0:7,2:9:2.74:0,3,58	0/0:14,0:15:10.82:0,11,208	0/0:9,0:9:9.51:0,10,53	1/1:13,12:25:16.95:465,17,0	0/0:33,9:41:4.90:0,5,61	0/0:18,0:18:19.62:0,20,477	0/0:15,0:15:24.07:0,24,578	0/0:27,0:28:54.09:0,54,1274	0/1:9,7:16:33.60:52,0,34	0/1:11,7:18:20.32:259,0,20	1/1:11,10:21:5.52:362,6,0	0/1:3,7:10:0.93:242,0,1
chr10	61495380	.	CACACACAA	C	1307.20	PASS	AB=0.996;AC=13;AF=0.232;AN=56;BaseQRankSum=11.428;DP=693;FS=13.162;HRun=0;HaplotypeScore=188.1073;InbreedingCoeff=-0.1177;MQ=59.06;MQ0=18;MQRankSum=-5.771;QD=4.81;ReadPosRankSum=2.495;VQSLOD=1.9384;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:26:99:128,0,198	0/0:13,0:12:29.92:0,30,264	0/0:33,0:12:26.10:0,26,288	0/1:31,0:14:25.11:25,0,186	0/1:30,0:28:99:135,0,655	0/0:37,0:36:91.26:0,91,2191	0/0:27,0:26:63.08:0,63,1497	0/1:28,0:28:99:405,0,119	1/1:2,12:14:12.04:328,12,0	0/0:29,0:29:75.67:0,76,901	0/0:22,0:22:47.91:0,48,534	0/1:23,0:23:23.92:24,0,307	0/0:30,0:30:26.29:0,26,374	0/1:19,1:20:70.68:71,0,282	0/1:22,0:22:22.38:22,0,330	0/1:21,0:21:99:171,0,174	0/0:19,0:18:46.95:0,47,530	0/1:14,0:14:95.41:95,0,198	0/0:18,0:17:43.85:0,44,400	0/1:30,0:30:4.05:4,0,322	0/0:45,0:45:35.11:0,35,624	0/0:22,0:22:54.02:0,54,1117	0/0:21,0:21:56.06:0,56,1297	0/0:30,0:30:75.06:0,75,1995	0/0:24,0:24:26.63:0,27,380	0/0:28,0:28:50.04:0,50,555	0/0:23,0:22:0.96:0,1,231	0/1:12,0:12:53.57:54,0,90
chr10	61499383	.	GTA	G	4550.76	PASS	AB=0.870;AC=41;AF=0.732;AN=56;BaseQRankSum=9.104;DP=395;FS=17.550;HRun=0;HaplotypeScore=51.5506;InbreedingCoeff=0.7491;MQ=63.34;MQ0=13;MQRankSum=-11.994;QD=18.13;ReadPosRankSum=1.612;VQSLOD=3.1558;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,8:8:15.05:192,15,0	1/1:1,3:3:6.02:84,6,0	0/0:22,1:22:39.66:0,40,932	0/1:17,3:18:29.76:30,0,796	1/1:1,12:12:3.44:42,3,0	0/0:20,0:20:27.09:0,27,486	0/0:27,0:26:78.27:0,78,1393	0/0:8,2:1:2.97:0,3,20	1/1:1,9:8:15.05:199,15,0	1/1:1,12:9:24.07:320,24,0	1/1:0,9:8:9.03:126,9,0	1/1:4,15:17:24.08:331,24,0	1/1:0,14:13:18.06:246,18,0	1/1:1,18:18:26.96:311,27,0	1/1:4,23:25:48.06:595,48,0	1/1:1,15:14:27.09:372,27,0	1/1:0,7:5:12.04:163,12,0	1/1:0,7:6:12.04:168,12,0	1/1:3,4:5:12.04:168,12,0	1/1:2,10:12:12.04:168,12,0	1/1:1,1:2:3.01:42,3,0	0/0:16,0:16:39.13:0,39,692	0/0:19,1:18:45.15:0,45,804	0/0:27,0:27:57.20:0,57,1016	1/1:1,7:7:12.04:155,12,0	1/1:0,12:12:36.12:504,36,0	1/1:2,17:15:17.90:252,18,0	1/1:0,3:3:6.02:84,6,0
chr10	61501859	.	GAT	G	142.25	PASS	AB=0.667;AC=9;AF=0.450;AN=20;BaseQRankSum=3.693;DP=220;FS=4.289;HRun=0;HaplotypeScore=12.3676;InbreedingCoeff=0.5776;MQ=30.60;MQ0=62;MQRankSum=-3.617;QD=3.84;ReadPosRankSum=-1.193;VQSLOD=0.5049;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	1/1:4,5:2:6.02:78,6,0	0/0:26,0:24:27.09:0,27,497	0/0:12,0:6:3.01:0,3,34	./.	./.	1/1:9,6:5:6.02:78,6,0	./.	./.	./.	./.	./.	./.	0/1:2,2:2:0:0,0,0	1/1:0,4:1:3.01:44,3,0	./.	./.	./.	0/0:18,0:17:30.10:0,30,556	0/0:24,0:22:39.13:0,39,719	0/0:6,0:6:3.01:0,3,56	./.	./.	1/1:3,2:3:3.01:38,3,0	./.
chr10	61504224	.	G	GA	16122.62	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=8.393;DP=618;FS=0.389;HRun=6;HaplotypeScore=107.7974;InbreedingCoeff=0.9985;MQ=76.24;MQ0=0;MQRankSum=-1.605;QD=32.77;ReadPosRankSum=0.307;VQSLOD=3.7049;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,10:10:27.09:340,27,0	1/1:1,8:9:24.08:302,24,0	0/0:15,0:15:32.64:0,33,304	0/0:11,0:11:20.95:0,21,210	1/1:3,24:27:72.23:898,72,0	0/0:22,0:21:66.15:0,66,673	0/0:16,0:16:36.04:0,36,353	1/1:4,31:35:93.26:1141,93,0	1/1:4,13:17:33.11:415,33,0	1/1:1,21:22:63.18:778,63,0	1/1:2,20:22:57.18:717,57,0	1/1:0,16:16:45.14:566,45,0	1/1:1,19:20:57.18:717,57,0	1/1:1,19:20:51.16:642,51,0	1/1:3,25:28:75.24:944,75,0	1/1:2,14:16:42.13:528,42,0	1/1:3,15:18:45.14:566,45,0	1/1:3,24:27:72.23:905,72,0	1/1:5,21:26:66.21:828,66,0	1/1:2,35:37:96.26:1189,96,0	1/1:1,16:17:45.14:566,45,0	0/0:27,0:27:75.17:0,75,765	0/0:20,0:20:51.10:0,51,513	0/0:15,0:15:39.09:0,39,398	1/1:1,25:25:75.24:944,75,0	1/1:2,26:28:78.25:980,78,0	1/1:9,34:43:68.70:1175,69,0	1/1:2,26:28:78.25:981,78,0
chr10	61505275	.	CTG	C	1305.26	PASS	AB=0.884;AC=18;AF=0.346;AN=52;BaseQRankSum=-3.187;DP=596;FS=3.891;HRun=0;HaplotypeScore=130.3318;InbreedingCoeff=0.5991;MQ=47.77;MQ0=29;MQRankSum=4.681;QD=5.44;ReadPosRankSum=-2.874;VQSLOD=2.7844;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:25:37.39:319,37,0	0/0:18,0:17:20.94:0,21,263	./.	./.	1/1:18,0:17:32.70:249,33,0	1/1:3,16:18:6.02:90,6,0	0/1:6,18:19:6.80:36,0,7	0/0:25,0:25:68.12:0,68,451	0/1:25,1:21:99:136,0,152	0/0:31,0:25:13.11:0,13,591	0/0:14,0:12:17.02:0,17,159	0/0:29,0:26:41.82:0,42,482	0/0:26,0:23:53.95:0,54,533	0/0:21,0:20:35.95:0,36,442	0/0:34,0:33:55.35:0,55,550	0/1:23,0:20:20.26:20,0,134	0/0:32,1:30:51.94:0,52,666	1/1:19,0:15:23.62:185,24,0	0/0:18,0:16:32.34:0,32,382	0/0:24,0:21:32.78:0,33,265	0/0:18,0:14:17.92:0,18,162	1/1:2,22:23:9.03:133,9,0	1/1:5,14:16:5.91:61,6,0	1/1:20,2:21:2.09:251,2,0	0/0:23,0:22:35.65:0,36,365	0/0:18,0:14:39.94:0,40,385	0/0:24,0:21:51.15:0,51,491	0/1:17,0:16:5.87:6,0,194
chr10	61505277	.	GTC	G	221.03	PASS	AB=1.000;AC=17;AF=0.327;AN=52;BaseQRankSum=-0.663;DP=597;FS=0.000;HRun=0;HaplotypeScore=134.3313;InbreedingCoeff=0.4132;MQ=47.65;MQ0=30;MQRankSum=1.598;QD=0.87;ReadPosRankSum=-1.820;VQSLOD=2.0145;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:24:6.88:26,7,0	0/0:17,0:16:11.99:0,12,105	./.	./.	0/1:20,0:19:7.47:7,0,20	1/1:17,1:17:5.98:47,6,0	1/1:24,0:19:3.40:18,3,0	1/1:26,0:26:5.92:44,6,0	0/1:27,0:22:25.46:29,0,25	0/0:30,0:24:27.95:0,28,262	0/0:13,0:11:8.94:0,9,79	0/0:29,0:26:23.93:0,24,207	0/0:24,1:23:20.98:0,21,198	0/0:21,0:20:20.92:0,21,210	0/0:33,0:32:20.83:0,21,185	1/1:16,8:21:11.82:113,12,0	0/0:32,0:30:34.74:0,35,326	0/1:19,0:15:9.83:10,0,11	0/0:18,0:17:12.01:0,12,117	0/0:23,0:20:6.45:0,6,48	0/0:18,0:14:8.97:0,9,71	0/1:27,0:26:13.03:46,0,13	1/1:17,0:14:2.98:21,3,0	0/1:22,0:21:23.54:24,0,79	0/0:23,0:22:24.42:0,24,226	0/0:18,0:14:17.75:0,18,174	0/0:24,0:22:29.11:0,29,223	0/0:15,0:15:13.19:0,13,100
chr10	61505281	.	C	CTCTG	1427.33	PASS	AB=0.975;AC=20;AF=0.385;AN=52;BaseQRankSum=2.825;DP=604;FS=5.238;HRun=0;HaplotypeScore=144.8304;InbreedingCoeff=-0.6138;MQ=47.26;MQ0=32;MQRankSum=0.036;QD=3.15;ReadPosRankSum=4.576;VQSLOD=1.8998;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:23:54.15:54,0,118	0/1:18,0:17:8.93:9,0,192	./.	./.	0/1:20,0:19:68.39:68,0,147	0/0:18,0:17:8.99:0,9,76	0/1:25,0:20:21.38:36,0,21	0/0:28,0:28:63:0,63,415	0/0:29,0:24:28.88:0,29,292	0/1:27,0:21:58.46:58,0,201	0/1:13,0:11:17.67:18,0,99	0/1:29,0:26:98.48:98,0,162	0/1:26,0:23:43.24:43,0,241	0/1:19,0:18:37.99:38,0,147	0/1:29,1:29:99:115,0,263	0/1:25,1:23:99:129,0,147	0/1:33,0:30:99:180,0,261	0/1:20,0:16:1.33:1,0,139	0/1:17,0:16:27.07:27,0,189	0/1:23,0:20:24.15:24,0,114	0/1:18,0:14:33.22:53,0,33	0/0:27,0:26:14.03:0,14,113	0/0:16,0:14:5.93:0,6,47	0/0:23,0:22:39.73:0,40,390	0/1:24,0:23:55.62:56,0,200	0/1:10,6:12:99:236,0,110	0/1:25,0:23:99:108,0,157	0/1:13,2:14:99:224,0,141
chr10	61505283	.	C	CTG	2697.32	PASS	AB=0.862;AC=20;AF=0.385;AN=52;BaseQRankSum=-3.520;DP=612;FS=5.037;HRun=0;HaplotypeScore=118.1783;InbreedingCoeff=-0.6351;MQ=47.14;MQ0=33;MQRankSum=-0.632;QD=5.71;ReadPosRankSum=5.700;VQSLOD=2.6110;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:22:18.96:19,0,152	0/1:14,4:17:75.36:75,0,170	./.	./.	0/0:21,0:20:5.83:0,6,185	0/0:18,0:17:6.85:0,7,47	0/1:26,0:21:14.16:14,0,17	0/1:26,0:26:25.33:25,0,344	0/0:28,0:23:22.62:0,23,298	0/1:22,5:20:99:204,0,163	0/1:9,3:10:81.44:81,0,102	0/1:18,10:27:99:299,0,147	0/1:20,11:27:99:205,0,211	0/1:14,7:20:99:139,0,106	0/1:24,6:29:99:204,0,236	0/1:27,0:24:30.87:31,0,154	0/1:26,6:30:99:430,0,210	0/0:20,0:16:13.57:0,14,167	0/1:16,1:16:60.59:61,0,171	0/1:14,9:20:90.39:90,0,114	0/1:10,7:14:33.13:152,0,33	0/1:26,0:25:2.61:3,0,55	0/0:16,0:14:5.52:0,6,26	0/0:23,0:22:30.93:0,31,336	0/1:20,5:23:99:213,0,135	0/1:15,1:12:90.19:139,0,90	0/1:18,7:22:98.97:400,0,99	0/1:14,0:13:59.07:59,0,137
chr10	61505841	.	TTTG	T	310.77	PASS	AB=0.834;AC=7;AF=0.135;AN=52;BaseQRankSum=5.065;DP=796;FS=32.832;HRun=0;HaplotypeScore=87.5634;InbreedingCoeff=-0.1596;MQ=25.92;MQ0=264;MQRankSum=0.327;QD=1.32;ReadPosRankSum=-0.297;VQSLOD=-0.0805;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:24:14.97:0,15,281	0/0:8,1:7:18.06:0,18,396	./.	./.	0/0:12,0:10:12.04:0,12,230	0/1:26,2:23:18.04:18,0,499	0/1:13,5:13:89.34:89,0,224	0/0:36,0:28:72.17:0,72,1462	0/1:24,4:16:2.10:2,0,264	0/0:25,1:17:45.15:0,45,992	0/0:16,0:7:5.91:0,6,82	0/0:44,2:35:54.19:0,54,1146	0/0:33,4:24:29.78:0,30,573	0/0:26,3:16:18.06:0,18,368	0/0:37,2:26:36.51:0,37,688	0/0:29,2:17:21.07:0,21,462	0/0:25,5:13:6.02:0,6,132	0/0:25,0:19:21.07:0,21,462	0/1:36,13:27:99:104,0,949	0/0:26,4:15:27.01:0,27,544	0/1:34,7:17:22.01:84,0,22	0/0:12,0:9:6.02:0,6,132	0/0:21,0:17:26.72:0,27,535	0/1:23,12:22:99:126,0,180	0/0:20,2:15:32.83:0,33,499	0/0:36,0:28:81.28:0,81,1754	0/1:30,6:27:3.23:3,0,736	0/0:11,0:3:6.02:0,6,104
chr10	61506124	.	C	CTA	727.03	PASS	AB=0.972;AC=11;AF=0.212;AN=52;BaseQRankSum=-4.397;DP=255;FS=6.661;HRun=0;HaplotypeScore=31.8788;InbreedingCoeff=0.5282;MQ=79.29;MQ0=7;MQRankSum=0.815;QD=9.82;ReadPosRankSum=0.847;VQSLOD=2.0019;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	0/0:4,0:4:12.04:0,12,146	0/1:22,0:8:0.01:0,0,0	0/0:28,0:10:0.58:0,1,17	0/1:5,0:5:0:0,0,0	0/0:11,0:11:30.07:0,30,352	0/0:3,0:3:3.01:0,3,37	0/0:36,0:37:78.03:0,78,870	1/1:0,2:2:6.02:97,6,0	0/0:6,0:6:12.03:0,12,137	0/0:6,0:6:9.03:0,9,110	0/0:7,0:7:15.03:0,15,171	0/0:5,0:5:9.03:0,9,110	0/0:3,0:3:2.99:0,3,24	0/0:5,0:5:14.88:0,15,161	0/0:5,0:5:9.03:0,9,110	0/0:18,0:18:42.13:0,42,513	1/1:5,0:10:2.92:17,3,0	0/0:7,0:7:9.03:0,9,110	0/1:10,1:11:21.59:22,0,265	0/0:4,0:5:8.86:0,9,87	./.	0/0:4,0:4:9.03:0,9,110	0/0:1,0:1:3.01:0,3,37	0/0:7,0:7:21.07:0,21,257	1/1:3,7:10:18.06:292,18,0	0/0:12,0:12:21.07:0,21,256	1/1:4,10:14:27.09:438,27,0
chr10	61508146	.	T	TC	65080.73	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=8.729;DP=1730;FS=0.424;HRun=1;HaplotypeScore=357.9415;InbreedingCoeff=0.9997;MQ=73.71;MQ0=0;MQRankSum=-14.806;QD=39.47;ReadPosRankSum=8.290;VQSLOD=2.2901;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,91:93:99:3448,232,0	1/1:1,39:40:99:1571,108,0	0/0:44,0:44:99:0,132,1806	0/0:37,0:37:98.49:0,98,1326	1/1:1,48:49:99:1825,123,0	1/1:0,37:37:99:1590,108,0	1/1:1,36:37:99:1522,102,0	1/1:0,34:35:99:1432,102,0	1/1:1,91:93:99:3602,244,0	1/1:1,74:76:99:3179,222,0	1/1:1,54:55:99:2101,141,0	1/1:0,72:72:99:3130,211,0	1/1:2,78:81:99:3194,217,0	1/1:1,78:80:99:3222,220,0	1/1:0,99:99:99:3975,268,0	1/1:0,75:75:99:3003,202,0	1/1:0,63:64:99:2425,166,0	1/1:1,26:28:84.24:1224,84,0	1/1:3,68:72:99:2906,207,0	1/1:1,73:74:99:3083,208,0	1/1:1,94:98:99:3676,252,0	1/1:0,32:32:96.27:1394,96,0	1/1:1,36:37:99:1476,99,0	1/1:0,58:58:99:1794,120,0	1/1:0,70:70:99:2618,178,0	1/1:3,65:68:99:2786,192,0	1/1:1,107:109:99:4456,301,0	1/1:0,15:15:30.10:448,30,0
chr10	61508251	.	AG	A	5883.91	PASS	AB=0.850;AC=9;AF=0.161;AN=56;BaseQRankSum=12.881;DP=1945;FS=0.295;HRun=2;HaplotypeScore=362.9011;InbreedingCoeff=0.8676;MQ=68.14;MQ0=0;MQRankSum=-2.673;QD=22.46;ReadPosRankSum=1.562;VQSLOD=3.2069;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,69:69:99:2389,187,0	0/0:37,0:37:99:0,105,1570	0/0:45,0:44:99:0,118,1630	0/0:53,0:53:99:0,131,1762	1/1:0,30:30:84.27:1089,84,0	0/0:39,0:39:99:0,108,1547	0/0:45,0:45:99:0,132,1944	1/1:0,27:27:75.18:924,75,0	0/1:84,18:102:99:395,0,3294	0/0:94,0:94:99:0,274,3996	0/0:51,0:51:99:0,147,2086	0/0:73,0:73:99:0,214,3063	0/0:92,0:92:99:0,259,3773	0/0:79,0:79:99:0,226,3319	0/0:113,0:113:99:0,337,4887	0/0:72,0:72:99:0,204,3051	0/0:112,0:112:99:0,325,4696	1/1:2,31:33:84.27:1086,84,0	0/0:96,0:96:99:0,277,3982	0/0:102,0:102:99:0,289,4144	0/0:122,0:122:99:0,355,5180	0/0:58,0:58:99:0,166,2438	0/0:45,0:45:99:0,132,1953	0/0:60,0:60:99:0,163,2394	0/0:84,0:84:99:0,247,3647	0/0:63,0:63:99:0,187,2703	0/0:124,0:124:99:0,370,5464	0/0:24,0:24:72.11:0,72,1021
chr10	61508738	.	T	TGAA	1198.28	PASS	AB=0.724;AC=11;AF=0.250;AN=44;BaseQRankSum=1.069;DP=1075;FS=11.851;HRun=0;HaplotypeScore=40.3800;InbreedingCoeff=0.0311;MQ=20.18;MQ0=435;MQRankSum=-0.250;QD=2.31;ReadPosRankSum=-1.858;VQSLOD=-0.2514;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:11,2:9:3.01:0,3,38	./.	./.	0/0:30,0:11:6.02:0,6,95	./.	0/0:20,0:6:3.01:0,3,47	./.	0/0:67,0:30:14.98:0,15,208	0/1:31,17:19:99:254,0,402	0/0:25,9:17:3.01:0,3,48	0/1:31,9:20:0.32:0,0,0	0/1:39,23:40:50.17:50,0,174	0/1:35,28:34:53.27:53,0,108	1/1:29,27:26:3.01:65,3,0	0/1:46,18:31:40.34:40,0,174	1/1:29,24:22:12.04:251,12,0	0/0:25,0:10:3.01:0,3,47	0/1:29,20:20:99:533,0,100	0/0:32,25:29:18.06:0,18,284	0/1:31,42:28:38.55:77,0,39	0/0:22,0:11:11.96:0,12,159	0/0:28,0:14:18.06:0,18,284	./.	0/0:29,7:21:18.06:0,18,284	0/0:29,0:17:48.10:0,48,730	0/0:33,28:28:0.47:0,0,1	0/0:9,0:1:3.01:0,3,47
chr10	61509063	.	T	TTTG	63.83	PASS	AB=0.793;AC=7;AF=0.130;AN=54;BaseQRankSum=4.884;DP=930;FS=16.638;HRun=0;HaplotypeScore=101.7286;InbreedingCoeff=-0.1609;MQ=39.41;MQ0=161;MQRankSum=-4.994;QD=0.27;ReadPosRankSum=-1.638;VQSLOD=0.5856;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:51,4:45:99:0,99,1631	0/0:12,1:11:9.03:0,9,153	0/0:30,0:4:8.82:0,9,115	0/0:33,0:7:15.02:0,15,225	0/1:16,4:12:44.87:45,0,300	0/0:22,0:21:39.13:0,39,664	0/0:19,0:17:27.09:0,27,460	./.	0/0:116,0:102:99:0,214,3473	0/0:29,3:24:66.21:0,66,1093	0/1:9,4:11:53.82:54,0,189	0/1:31,5:29:8.75:9,0,877	0/1:35,14:31:2.66:3,0,1007	0/0:40,10:37:3.21:0,3,1066	0/0:34,10:28:50.69:0,51,851	0/1:33,8:30:17.72:18,0,741	0/0:28,6:29:3.39:0,3,1107	0/1:16,5:16:27.03:27,0,583	0/0:18,9:9:21.06:0,21,332	0/0:27,2:19:33.11:0,33,562	0/0:40,10:36:21.86:0,22,1115	0/0:14,0:14:30.05:0,30,464	0/0:20,0:20:35.04:0,35,504	0/0:27,0:25:60.65:0,61,1023	0/0:30,3:29:66.23:0,66,1112	0/0:27,0:22:63.17:0,63,1040	0/1:32,23:30:29.97:30,0,548	0/0:7,0:6:12.04:0,12,199
chr10	61509258	.	ATGACTGCT	A	2671.16	PASS	AB=0.788;AC=9;AF=0.205;AN=44;BaseQRankSum=5.992;DP=709;FS=59.143;HRun=0;HaplotypeScore=58.8464;InbreedingCoeff=0.0878;MQ=19.56;MQ0=328;MQRankSum=-4.189;QD=12.03;ReadPosRankSum=3.108;VQSLOD=-0.5211;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:11:12.04:0,12,498	1/1:9,4:4:3.01:81,3,0	./.	./.	0/0:26,0:15:3.01:0,3,129	0/0:19,0:9:6.02:0,6,257	./.	./.	0/1:21,9:14:99:306,0,239	0/1:23,9:14:99:320,0,615	0/1:16,11:19:99:663,0,448	0/0:29,1:15:12.04:0,12,506	0/0:32,0:14:15.05:0,15,529	0/0:38,0:20:21.07:0,21,886	./.	0/0:30,1:15:8.97:0,9,355	0/0:18,0:2:3.01:0,3,111	0/0:24,0:12:27.09:0,27,1159	0/0:21,3:5:3.01:0,3,129	1/1:15,39:22:42.14:1133,42,0	0/1:37,2:10:99:149,0,246	0/0:12,0:8:6.02:0,6,257	0/0:14,0:8:9.03:0,9,380	0/0:23,0:7:12.04:0,12,514	0/1:17,10:13:99:150,0,136	0/0:24,1:6:15.04:0,15,539	0/0:31,0:11:6.02:0,6,256	./.
chr10	61509441	.	GA	G	227.74	PASS	AC=8;AF=0.200;AN=40;BaseQRankSum=1.143;DP=538;FS=9.767;HRun=2;HaplotypeScore=36.2202;InbreedingCoeff=0.6389;MQ=19.88;MQ0=324;MQRankSum=1.314;QD=4.38;ReadPosRankSum=-0.105;VQSLOD=-0.4716;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:19:36.12:0,36,539	0/0:10,0:2:3.01:0,3,45	./.	./.	./.	1/1:5,10:8:6.02:78,6,0	1/1:0,5:2:6.02:78,6,0	./.	0/0:26,0:7:6.02:0,6,90	0/0:31,0:11:27.09:0,27,404	./.	0/0:16,0:10:11.95:0,12,130	0/0:13,0:7:2.98:0,3,21	0/0:19,0:14:3.01:0,3,45	./.	0/0:17,0:8:15.05:0,15,224	0/0:22,0:8:12.04:0,12,180	0/0:7,0:4:9.03:0,9,135	0/0:21,0:14:36.12:0,36,539	0/0:41,0:10:21.06:0,21,290	0/0:20,0:6:6.02:0,6,88	./.	1/1:4,8:3:3.01:39,3,0	1/1:10,10:8:12.04:156,12,0	0/0:32,0:12:21.07:0,21,314	0/0:16,0:5:15.04:0,15,205	0/0:38,0:20:24.08:0,24,358	./.
chr10	61509857	.	TA	T	495.25	PASS	AC=10;AF=1.00;AN=10;DP=602;FS=0.000;HRun=1;HaplotypeScore=11.6865;MQ=6.44;MQ0=562;QD=3.72;VQSLOD=-0.2618;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	1/1:3,7:4:12.04:168,12,0	./.	./.	./.	./.	./.	./.	./.	./.	1/1:17,7:1:2.97:20,3,0	./.	./.	./.	./.	./.	./.	./.	./.	1/1:8,14:9:6.02:84,6,0	./.	./.	./.	./.	1/1:12,10:4:9.03:126,9,0	./.	1/1:30,25:4:12.04:167,12,0	./.
chr10	61511115	.	A	AT	279.04	PASS	AC=4;AF=0.167;AN=24;BaseQRankSum=1.775;DP=132;FS=2.471;HRun=1;HaplotypeScore=26.8217;InbreedingCoeff=0.5279;MQ=54.76;MQ0=74;MQRankSum=-2.706;QD=18.60;ReadPosRankSum=2.560;VQSLOD=4.0330;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:27,0:13:33.10:0,33,418	0/0:23,0:11:30.10:0,30,389	./.	1/1:0,4:4:9.03:134,9,0	./.	./.	1/1:1,10:7:17.99:242,18,0	./.	./.	0/0:8,0:2:6.02:0,6,78	0/0:3,0:1:3.01:0,3,39	./.	0/0:5,0:1:3.01:0,3,39	./.	0/0:3,0:2:6.02:0,6,78	0/0:2,0:1:3.01:0,3,39	0/0:13,0:3:9.03:0,9,115	./.	0/0:7,0:6:9.03:0,9,116	./.	./.	./.	./.	./.	0/0:5,0:1:3.01:0,3,39	./.
chr10	61511347	.	ATCCTAGAG	A	404.59	PASS	AC=8;AF=0.667;AN=12;BaseQRankSum=3.814;DP=84;FS=25.705;HRun=0;HaplotypeScore=89.9315;MQ=133.72;MQ0=11;MQRankSum=-4.008;QD=33.72;ReadPosRankSum=-0.424;VQSLOD=1.2340;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:26,0:26:78.27:0,78,3355	0/0:30,0:30:84.75:0,85,3469	./.	./.	./.	./.	./.	1/1:0,2:1:3.01:91,3,0	1/1:0,6:4:9.03:272,9,0	./.	./.	./.	./.	./.	1/1:0,1:1:3.01:38,3,0	./.	./.	./.	./.	./.	./.	./.	1/1:0,3:1:3.01:91,3,0	./.	./.	./.
chr10	61511456	.	A	AATATAAAAT	10652.55	PASS	AC=42;AF=0.913;AN=46;BaseQRankSum=0.392;DP=161;FS=36.026;HRun=0;HaplotypeScore=82.8183;InbreedingCoeff=0.3619;MQ=56.29;MQ0=10;MQRankSum=-3.379;QD=70.55;ReadPosRankSum=1.982;VQSLOD=3.0087;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	1/1:0,4:4:3.01:144,3,0	0/0:6,0:6:7.37:0,7,81	0/0:4,0:2:0.47:0,0,1	1/1:2,3:5:9.03:324,9,0	1/1:0,0:2:6.02:280,6,0	1/1:0,0:1:3.01:144,3,0	./.	1/1:2,8:8:9.03:329,9,0	1/1:3,12:13:36.09:1597,36,0	1/1:4,8:10:15.05:524,15,0	1/1:1,5:6:12.04:491,12,0	1/1:2,5:6:9.03:433,9,0	1/1:0,3:3:6.02:289,6,0	1/1:1,3:4:6.02:289,6,0	1/1:3,5:8:12.04:408,12,0	./.	1/1:1,0:2:3.01:34,3,0	1/1:4,5:5:15.02:517,15,0	1/1:2,14:12:27.09:1211,27,0	1/1:2,1:3:3.01:144,3,0	1/1:3,2:5:15.05:457,15,0	1/1:3,3:5:15.05:525,15,0	./.	1/1:1,8:10:24.08:1048,24,0	1/1:1,2:3:9.03:275,9,0	1/1:1,12:11:27.09:1188,27,0	./.
chr10	61511740	.	A	AG	23772.31	PASS	AC=50;AF=0.926;AN=54;BaseQRankSum=3.163;DP=627;FS=1.680;HRun=1;HaplotypeScore=145.6805;InbreedingCoeff=0.9318;MQ=60.36;MQ0=5;MQRankSum=-3.747;QD=39.69;ReadPosRankSum=5.417;VQSLOD=4.2036;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,17:18:48.16:719,48,0	1/1:0,3:2:6.02:90,6,0	0/0:17,0:16:48.15:0,48,614	0/0:11,0:10:24.05:0,24,280	1/1:1,13:14:30.10:449,30,0	1/1:2,23:25:66.22:989,66,0	1/1:1,13:14:39.09:559,39,0	./.	1/1:1,36:37:99:1528,102,0	1/1:2,35:34:93.32:1392,93,0	1/1:0,14:11:27.09:404,27,0	1/1:2,19:21:60.16:874,60,0	1/1:0,19:19:57.19:850,57,0	1/1:0,32:32:87.26:1303,87,0	1/1:0,29:29:78.26:1169,78,0	1/1:3,19:22:48.16:719,48,0	1/1:3,15:16:45.15:674,45,0	1/1:2,6:8:13.35:263,13,0	1/1:3,57:59:99:2498,169,0	1/1:1,29:24:69.23:1033,69,0	1/1:1,61:62:99:2653,178,0	1/1:0,7:7:21.07:314,21,0	1/1:1,8:8:21.07:314,21,0	1/1:1,19:20:57.19:854,57,0	1/1:0,21:21:63.21:943,63,0	1/1:0,16:16:48.16:708,48,0	1/1:1,48:47:99:2022,135,0	1/1:0,14:14:30.10:450,30,0
chr10	61512861	.	G	GTATT	546.44	PASS	AC=16;AF=1.000;AN=16;DP=173;FS=0.000;HRun=0;HaplotypeScore=18.1256;MQ=21.60;MQ0=70;QD=8.04;VQSLOD=1.1516;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	./.	1/1:2,0:2:2.97:20,3,0	./.	./.	1/1:6,4:8:12.51:286,13,0	./.	1/1:15,1:12:3.01:71,3,0	./.	./.	1/1:3,0:2:2.98:21,3,0	./.	1/1:5,0:2:2.98:21,3,0	./.	./.	1/1:14,0:8:3.48:53,3,0	./.	./.	./.	./.	./.	./.	./.	1/1:6,1:2:3.01:71,3,0	1/1:2,0:3:5.99:73,6,0
chr10	61513829	.	CTGTG	C	36124.95	PASS	AC=50;AF=0.926;AN=54;BaseQRankSum=1.952;DP=1029;FS=1.794;HRun=0;HaplotypeScore=210.2052;InbreedingCoeff=0.9919;MQ=59.74;MQ0=2;MQRankSum=-6.634;QD=37.67;ReadPosRankSum=8.295;VQSLOD=4.6570;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,20:27:48.16:834,48,0	1/1:0,13:10:27.56:470,28,0	0/0:39,0:33:78.26:0,78,1792	0/0:31,0:30:69.12:0,69,1435	1/1:2,20:22:48.12:788,48,0	1/1:3,21:24:48.16:834,48,0	1/1:1,12:13:30.10:521,30,0	./.	1/1:4,57:61:99:2242,129,0	1/1:4,55:57:99:2728,160,0	1/1:10,36:43:87.24:1477,87,0	1/1:5,29:34:81.28:1394,81,0	1/1:6,39:45:99:1809,105,0	1/1:5,44:48:99:2023,117,0	1/1:8,40:48:99:1744,102,0	1/1:3,34:37:90.31:1551,90,0	1/1:10,35:44:35.76:1260,36,0	1/1:2,8:10:18.06:313,18,0	1/1:16,47:61:99:2160,132,0	1/1:4,73:67:99:2824,168,0	1/1:10,39:49:89.04:1563,89,0	1/1:3,16:18:42.14:730,42,0	1/1:0,24:21:51.17:887,51,0	1/1:2,9:11:21.07:365,21,0	1/1:6,45:45:99:1929,111,0	1/1:1,21:22:63.22:1091,63,0	1/1:5,91:93:99:4171,241,0	1/1:6,8:13:24.08:417,24,0
chr10	61518179	.	T	TC	29573.11	PASS	AC=50;AF=0.926;AN=54;BaseQRankSum=-6.841;DP=998;FS=0.724;HRun=6;HaplotypeScore=96.7701;InbreedingCoeff=0.9988;MQ=67.75;MQ0=1;MQRankSum=-4.876;QD=30.84;ReadPosRankSum=5.949;VQSLOD=4.1837;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,23:32:63.20:793,63,0	1/1:1,11:12:33.11:414,33,0	0/0:13,0:13:32.10:0,32,307	0/0:26,0:24:34.59:0,35,452	1/1:4,22:26:63.06:740,63,0	1/1:1,23:24:60.19:754,60,0	1/1:3,12:15:27.09:340,27,0	./.	1/1:6,45:51:99:1466,117,0	1/1:3,48:51:99:1701,138,0	1/1:2,38:40:99:1355,114,0	1/1:9,27:36:72.22:898,72,0	1/1:5,33:38:99:1229,99,0	1/1:5,36:41:90.29:1132,90,0	1/1:3,41:43:99:1283,102,0	1/1:4,46:50:99:1622,129,0	1/1:2,34:37:98.85:1240,99,0	1/1:0,12:12:30.10:377,30,0	1/1:12,43:55:99:1671,135,0	1/1:9,85:94:99:3019,247,0	1/1:6,64:69:99:2188,175,0	1/1:0,21:21:60.19:754,60,0	1/1:2,19:21:54.17:669,54,0	1/1:2,22:24:60.19:755,60,0	1/1:3,43:46:99:1547,123,0	1/1:3,15:18:45.14:566,45,0	1/1:11,75:85:99:2533,177,0	1/1:0,15:15:42.13:528,42,0
chr10	61518182	.	C	CA	7529.31	PASS	AB=0.997;AC=44;AF=0.815;AN=54;BaseQRankSum=8.428;DP=978;FS=6.681;HRun=0;HaplotypeScore=170.6957;InbreedingCoeff=0.2655;MQ=67.98;MQ0=0;MQRankSum=-2.615;QD=8.04;ReadPosRankSum=15.753;VQSLOD=1.5410;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:32,0:32:99:167,0,121	1/1:12,0:12:7.13:113,7,0	0/0:13,0:13:36.82:0,37,460	0/0:28,0:25:65.95:0,66,818	0/1:26,0:26:19.19:175,0,19	1/1:23,0:23:54.09:225,54,0	0/1:16,0:16:60.63:61,0,65	./.	1/1:48,0:48:81.66:403,82,0	1/1:50,0:50:34.11:330,34,0	1/1:40,1:41:43.08:333,43,0	1/1:29,1:30:18.46:249,18,0	1/1:36,0:36:67.08:374,67,0	1/1:39,0:39:13.61:264,14,0	1/1:43,0:42:44.23:325,44,0	1/1:50,0:50:23.89:377,24,0	1/1:37,0:37:50.42:340,50,0	1/1:12,0:12:27.33:119,27,0	0/1:54,1:55:99:387,0,102	1/1:92,0:92:35.68:720,36,0	1/1:69,0:69:69.66:554,70,0	1/1:22,0:22:31.93:194,32,0	1/1:19,1:20:49.62:250,50,0	0/1:25,0:25:13.53:160,0,14	1/1:45,0:45:63.83:405,64,0	0/1:18,0:18:6.02:109,0,6	1/1:81,0:80:45.69:715,46,0	1/1:15,0:15:38.99:180,39,0
chr10	61519300	.	G	GA	33907.38	PASS	AC=50;AF=0.926;AN=54;BaseQRankSum=-6.248;DP=1093;FS=5.208;HRun=6;HaplotypeScore=100.8765;InbreedingCoeff=0.9828;MQ=65.42;MQ0=0;MQRankSum=-7.659;QD=32.14;ReadPosRankSum=5.364;VQSLOD=4.1218;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,12:15:33.11:415,33,0	1/1:1,16:17:42.13:528,42,0	0/0:24,0:24:30.41:0,30,420	0/0:14,0:14:23.98:0,24,224	1/1:2,32:34:90.25:1114,90,0	1/1:1,28:29:81.26:1019,81,0	1/1:0,26:26:72.23:906,72,0	./.	1/1:6,65:71:99:2205,178,0	1/1:7,56:63:99:2112,171,0	1/1:1,43:44:99:1529,123,0	1/1:0,24:24:69.12:831,69,0	1/1:6,46:52:99:1649,135,0	1/1:5,46:51:99:1585,132,0	1/1:6,50:56:99:1640,132,0	1/1:2,36:38:99:1338,108,0	1/1:6,38:44:99:1438,106,0	1/1:1,16:17:45.08:546,45,0	1/1:10,51:61:99:1921,153,0	1/1:8,92:100:99:3436,277,0	1/1:6,67:73:99:2363,190,0	1/1:2,21:23:57.18:717,57,0	1/1:5,21:26:63.20:793,63,0	1/1:0,16:16:39.12:491,39,0	1/1:4,39:43:96.31:1208,96,0	1/1:2,20:22:60.19:755,60,0	1/1:8,98:106:99:3217,259,0	1/1:0,4:4:12.04:151,12,0
chr10	61520397	.	TGA	T	4246.62	PASS	AB=0.779;AC=15;AF=0.278;AN=54;BaseQRankSum=0.577;DP=888;FS=26.545;HRun=0;HaplotypeScore=229.7862;InbreedingCoeff=-0.3858;MQ=52.13;MQ0=26;MQRankSum=-12.378;QD=8.06;ReadPosRankSum=-5.735;VQSLOD=2.3513;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,151,3028	0/1:10,3:13:15.73:16,0,575	0/0:39,0:13:35.99:0,36,670	0/0:39,0:30:85.53:0,86,1668	0/0:34,0:33:96.33:0,96,1949	0/0:20,0:20:51.18:0,51,1035	0/0:17,0:17:51.16:0,51,1000	./.	0/0:68,0:68:99:0,199,3928	0/1:31,9:40:99:325,0,1562	0/1:17,9:26:99:132,0,972	0/1:14,8:22:99:282,0,716	0/1:20,11:31:99:398,0,1124	0/1:20,6:24:99:178,0,933	0/1:31,13:43:99:460,0,1700	0/1:31,11:38:99:374,0,1521	0/1:31,10:40:99:274,0,1687	0/0:20,0:20:57.18:0,57,1108	0/1:27,4:28:99:160,0,1304	0/1:40,15:53:99:484,0,2086	0/1:47,14:60:57.86:58,0,2238	0/0:17,0:17:48.16:0,48,960	0/0:25,0:25:75.26:0,75,1505	0/0:25,0:25:63.11:0,63,1159	0/1:15,7:21:99:141,0,797	0/1:7,6:13:99:254,0,387	0/1:39,21:60:99:711,0,2054	0/0:4,0:4:11.99:0,12,166
chr10	61521143	.	TA	T	24996.22	PASS	AC=50;AF=0.926;AN=54;BaseQRankSum=-0.236;DP=937;FS=1.178;HRun=6;HaplotypeScore=137.5553;InbreedingCoeff=0.9841;MQ=67.90;MQ0=0;MQRankSum=-7.603;QD=28.37;ReadPosRankSum=6.564;VQSLOD=2.7392;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,30:32:84.21:902,84,0	1/1:0,16:16:48.12:516,48,0	0/0:19,0:19:45.09:0,45,534	0/0:37,0:37:93.13:0,93,1171	1/1:1,33:34:96.24:1032,96,0	1/1:0,26:26:69.17:742,69,0	1/1:3,16:19:45.11:484,45,0	./.	1/1:2,49:51:99:1354,126,0	1/1:4,48:52:99:1516,141,0	1/1:1,42:43:99:1258,117,0	1/1:0,21:21:60.15:645,60,0	1/1:1,32:33:84.21:903,84,0	1/1:1,30:31:87.22:935,87,0	1/1:2,30:32:81.20:871,81,0	1/1:1,30:31:84.21:903,84,0	1/1:1,31:32:84.21:903,84,0	1/1:0,14:14:42.11:451,42,0	1/1:5,62:67:99:1901,180,0	1/1:10,77:86:99:2257,211,0	1/1:4,60:64:99:1773,165,0	1/1:1,24:25:72.14:761,72,0	1/1:0,21:21:57.14:613,57,0	1/1:0,12:12:33.08:355,33,0	1/1:1,37:38:99:1161,108,0	1/1:2,29:31:87.19:925,87,0	1/1:6,59:65:99:1708,159,0	1/1:0,4:4:12.03:129,12,0
chr10	61521957	.	A	AAAGG	2644.40	PASS	AB=0.859;AC=9;AF=0.180;AN=50;BaseQRankSum=-3.432;DP=807;FS=5.152;HRun=0;HaplotypeScore=124.6597;InbreedingCoeff=0.5308;MQ=38.47;MQ0=107;MQRankSum=-0.937;QD=22.41;ReadPosRankSum=-1.922;VQSLOD=2.6674;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,11:11:15.52:380,16,0	0/0:18,0:18:33.04:0,33,521	./.	./.	1/1:7,21:28:36.12:906,36,0	0/0:14,0:11:9.03:0,9,155	0/0:10,0:7:3.01:0,3,50	./.	0/1:13,20:28:22.66:1011,0,23	0/0:44,0:35:90.31:0,90,1555	0/0:68,0:65:78.05:0,78,1310	0/0:17,0:15:24.08:0,24,415	0/0:27,0:23:29.60:0,30,510	0/0:30,0:22:27.09:0,27,467	0/0:27,0:19:21.03:0,21,363	0/0:32,0:25:39.13:0,39,667	0/0:31,0:24:15.05:0,15,259	1/1:3,10:11:16.08:452,16,0	0/0:33,0:21:48.16:0,48,828	0/0:82,0:81:99:0,175,2958	0/0:26,0:19:15.05:0,15,259	0/0:17,0:15:27.09:0,27,449	0/0:21,0:19:33.11:0,33,570	0/1:8,0:7:22:22,0,46	0/0:58,0:56:99:0,105,1783	0/1:20,1:19:24.55:25,0,750	0/0:78,0:57:84.72:0,85,1419	0/0:11,0:9:12.04:0,12,207
chr10	61523955	.	GA	G	22448.04	PASS	AC=50;AF=0.926;AN=54;BaseQRankSum=-1.627;DP=760;FS=0.000;HRun=2;HaplotypeScore=76.5289;InbreedingCoeff=0.9697;MQ=47.71;MQ0=82;MQRankSum=-2.131;QD=31.09;ReadPosRankSum=3.034;VQSLOD=4.5375;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,34:34:93.30:1207,93,0	1/1:0,11:11:33.11:428,33,0	0/0:17,0:8:18.05:0,18,236	0/0:18,0:10:21.07:0,21,315	1/1:0,7:7:21.07:272,21,0	1/1:0,24:23:66.21:856,66,0	1/1:2,12:12:33.11:428,33,0	./.	1/1:0,59:56:99:1906,147,0	1/1:2,31:29:87.28:1130,87,0	1/1:1,26:26:57.19:739,57,0	1/1:2,24:22:66.21:856,66,0	1/1:0,39:39:99:1401,108,0	1/1:1,40:37:87.28:1128,87,0	1/1:1,32:31:72.23:933,72,0	1/1:3,27:28:66.21:856,66,0	1/1:3,36:34:84.27:1087,84,0	1/1:1,5:4:12.04:154,12,0	1/1:3,54:45:99:1747,135,0	1/1:0,38:37:99:1284,99,0	1/1:1,54:53:99:1869,144,0	1/1:0,16:15:42.14:544,42,0	1/1:1,19:19:48.16:623,48,0	1/1:3,8:8:21.07:273,21,0	1/1:0,18:18:39.13:506,39,0	1/1:3,18:18:54.18:701,54,0	1/1:2,50:45:99:1284,99,0	1/1:1,7:6:18.06:234,18,0
chr10	61524966	.	AG	A	20120.15	PASS	AC=50;AF=0.926;AN=54;BaseQRankSum=-3.245;DP=870;FS=5.182;HRun=3;HaplotypeScore=108.2012;InbreedingCoeff=0.8748;MQ=42.49;MQ0=34;MQRankSum=-1.721;QD=24.87;ReadPosRankSum=2.548;VQSLOD=4.0220;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,19:19:30.03:345,30,0	1/1:0,25:19:45.14:557,45,0	0/0:30,0:7:15.20:0,15,227	0/0:28,0:2:6.02:0,6,86	1/1:1,19:15:36.11:442,36,0	1/1:0,17:15:30.09:371,30,0	1/1:0,6:5:9.03:111,9,0	./.	1/1:1,66:63:99:1984,162,0	1/1:2,41:35:99:1193,99,0	1/1:1,39:33:75.15:891,75,0	1/1:2,24:23:51.16:629,51,0	1/1:2,42:37:99:1217,99,0	1/1:1,37:32:93.25:1132,93,0	1/1:1,41:30:75.24:924,75,0	1/1:3,41:41:99:1224,99,0	1/1:4,41:39:87.27:1076,87,0	1/1:3,13:11:12.38:314,12,0	1/1:8,31:31:87.24:1050,87,0	1/1:3,56:48:99:1206,99,0	1/1:3,21:22:45.14:557,45,0	1/1:4,27:25:60.19:742,60,0	1/1:1,22:20:45.14:554,45,0	1/1:2,10:12:21.05:260,21,0	1/1:0,26:23:47.77:578,48,0	1/1:0,17:17:51.16:629,51,0	1/1:6,72:71:99:1985,125,0	1/1:0,4:4:12.04:149,12,0
chr10	61525391	.	AT	A	5888.27	PASS	AC=48;AF=0.923;AN=52;BaseQRankSum=-0.152;DP=632;FS=5.499;HRun=8;HaplotypeScore=115.3678;InbreedingCoeff=0.7687;MQ=36.87;MQ0=34;MQRankSum=0.361;QD=10.10;ReadPosRankSum=4.103;VQSLOD=3.1611;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,12:4:9.01:87,9,0	1/1:3,9:17:29.18:226,29,0	0/0:15,0:5:12.04:0,12,143	0/0:23,1:7:12:0,12,127	1/1:5,10:13:12.01:115,12,0	1/1:0,0:7:10.19:30,10,0	./.	./.	1/1:4,19:27:50.31:389,50,0	1/1:4,14:26:54.29:441,54,0	1/1:4,13:28:37.23:290,37,0	1/1:0,6:18:23.17:169,23,0	1/1:4,16:21:35.17:284,35,0	1/1:6,10:18:34.33:222,34,0	1/1:5,12:33:49.43:326,49,0	1/1:3,17:27:50.32:389,50,0	1/1:5,7:16:29.28:186,29,0	1/1:1,2:2:3:29,3,0	1/1:13,7:13:28.13:185,28,0	1/1:8,35:60:99:918,114,0	1/1:8,3:9:12.12:76,12,0	1/1:2,0:15:16.30:48,16,0	1/1:2,0:18:24.34:72,24,0	1/1:0,0:6:10.19:30,10,0	1/1:4,15:33:66.78:467,67,0	1/1:2,17:17:47.97:444,48,0	1/1:5,28:34:53.41:379,53,0	1/1:1,3:4:9.01:87,9,0
chr10	61528405	.	CCG	C	42.57	PASS	AC=4;AF=0.167;AN=24;BaseQRankSum=0.635;DP=215;FS=2.680;HRun=0;HaplotypeScore=10.1600;InbreedingCoeff=0.3131;MQ=30.21;MQ0=61;MQRankSum=-1.059;QD=10.64;ReadPosRankSum=0.529;VQSLOD=2.9424;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	0/0:2,0:2:6.02:0,6,99	0/0:35,0:2:3.01:0,3,45	./.	1/1:0,1:1:3.01:36,3,0	./.	0/0:18,0:11:12:0,12,194	./.	0/0:6,0:3:3.01:0,3,57	./.	./.	0/0:7,4:2:6.02:0,6,115	./.	0/0:5,5:2:3.01:0,3,55	0/0:6,0:2:3.01:0,3,43	1/1:0,3:2:6.02:92,6,0	0/0:22,0:18:9.03:0,9,141	0/0:9,0:1:3.01:0,3,58	./.	./.	0/0:15,0:4:3.01:0,3,58	./.	./.	./.	./.	./.	./.	./.
chr10	61536375	.	A	AAT	16283.21	PASS	AC=50;AF=0.926;AN=54;BaseQRankSum=-2.457;DP=473;FS=9.929;HRun=0;HaplotypeScore=400.0475;InbreedingCoeff=0.8032;MQ=51.78;MQ0=3;MQRankSum=-2.385;QD=36.76;ReadPosRankSum=0.924;VQSLOD=1.7271;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:11:31.35:497,31,0	1/1:14,0:14:29.85:568,30,0	0/0:21,0:15:34.69:0,35,429	0/0:8,0:6:6.32:0,6,133	1/1:16,0:15:32.71:538,33,0	1/1:5,0:5:7.27:108,7,0	1/1:8,0:8:18.95:309,19,0	./.	1/1:38,2:41:33.63:1202,34,0	1/1:20,0:25:71.71:1184,72,0	1/1:18,0:18:40.21:608,40,0	1/1:14,0:14:21.19:477,21,0	1/1:27,2:29:60.38:1078,60,0	1/1:22,4:27:28.42:812,28,0	1/1:27,1:28:61:1072,61,0	1/1:16,0:16:31.73:684,32,0	1/1:8,1:9:12.04:207,12,0	1/1:2,3:5:11.53:178,12,0	1/1:27,1:28:72.24:1289,72,0	1/1:29,0:29:78.31:1175,78,0	1/1:26,0:26:39.27:611,39,0	1/1:12,0:12:32.76:456,33,0	1/1:7,1:8:21.07:398,21,0	1/1:4,0:4:6.02:100,6,0	1/1:16,0:16:38.01:661,38,0	1/1:10,0:10:29.13:490,29,0	1/1:35,2:37:82.66:1371,83,0	1/1:6,0:6:9.95:209,10,0
chr10	61537313	.	AGC	A	971.12	PASS	AB=0.647;AC=1;AF=0.019;AN=54;BaseQRankSum=0.255;DP=983;FS=0.694;HRun=0;HaplotypeScore=319.3254;InbreedingCoeff=-0.0200;MQ=61.65;MQ0=4;MQRankSum=-2.819;QD=17.66;ReadPosRankSum=0.248;VQSLOD=2.6702;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,105,2001	0/0:24,0:24:66.18:0,66,1227	0/0:24,0:20:56.68:0,57,966	0/0:29,0:26:51.61:0,52,1104	0/0:33,0:33:93.19:0,93,1675	0/0:18,0:18:48.11:0,48,929	0/0:24,0:24:72.25:0,72,1443	./.	0/1:25,30:55:99:1045,0,1239	0/0:35,0:35:99:0,102,1753	0/0:25,0:25:72.22:0,72,1385	0/0:29,0:29:87.24:0,87,1616	0/0:41,0:41:99:0,117,2208	0/0:37,0:37:99:0,111,2016	0/0:56,0:56:99:0,168,3066	0/0:32,1:32:47.48:0,47,1755	0/0:42,0:42:99:0,126,2432	0/0:14,0:14:42.10:0,42,810	0/0:53,0:48:99:0,135,2447	0/0:59,0:59:99:0,175,3409	0/0:112,0:112:99:0,331,6126	0/0:26,0:26:66.23:0,66,1324	0/0:15,0:15:45.15:0,45,888	0/0:24,0:24:60.21:0,60,1210	0/0:42,0:42:99:0,123,2439	0/0:18,0:18:54.14:0,54,1053	0/0:75,0:75:99:0,220,4081	0/0:5,0:4:12.04:0,12,243
chr10	61538363	.	CAG	C	17180.44	PASS	AB=0.688;AC=25;AF=0.463;AN=54;BaseQRankSum=-12.704;DP=988;FS=4.221;HRun=0;HaplotypeScore=178.1182;InbreedingCoeff=-0.1648;MQ=51.81;MQ0=34;MQRankSum=0.221;QD=20.33;ReadPosRankSum=-0.038;VQSLOD=5.1079;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,18:17:36.05:521,36,0	0/1:10,8:18:99:316,0,231	0/0:13,0:1:3.01:0,3,58	0/0:16,0:2:6.02:0,6,116	1/1:2,32:33:57.19:857,57,0	0/0:21,0:21:44.77:0,45,451	0/0:13,0:12:30.08:0,30,330	./.	0/1:26,45:71:99:2108,0,150	0/1:21,21:40:99:755,0,437	0/1:35,22:53:99:632,0,573	0/1:19,4:23:99:201,0,278	0/1:28,21:49:99:885,0,453	0/1:23,20:42:99:825,0,386	0/1:13,22:34:99:870,0,214	0/1:16,17:33:99:634,0,234	0/1:39,12:49:99:457,0,707	1/1:6,22:25:51:745,51,0	0/1:25,25:40:99:991,0,240	0/1:35,54:88:99:2092,0,408	0/1:18,27:43:99:973,0,229	0/0:22,0:22:54.11:0,54,556	0/0:31,0:31:72.18:0,72,780	0/0:23,0:21:57.13:0,57,611	0/1:24,16:39:99:550,0,411	1/1:1,13:14:8.08:449,8,0	0/1:45,42:85:99:1678,0,648	1/1:0,16:16:42.14:642,42,0
chr10	61539401	.	T	TA	37.95	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.333;DP=1106;FS=8.832;HRun=2;HaplotypeScore=97.5329;InbreedingCoeff=0.9115;MQ=55.01;MQ0=9;MQRankSum=-3.327;QD=6.33;ReadPosRankSum=-0.305;VQSLOD=-0.0642;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:42.12:0,42,526	0/0:16,0:16:39.10:0,39,505	0/0:11,0:7:21.07:0,21,273	0/0:13,1:9:18.01:0,18,220	0/0:40,0:40:99:0,99,1269	0/0:23,0:23:39.13:0,39,501	0/0:14,0:14:30.05:0,30,370	1/1:0,6:3:9.03:121,9,0	0/0:56,0:56:99:0,123,1597	0/0:49,0:49:99:0,147,1904	0/0:55,0:55:99:0,132,1655	0/0:44,0:43:99:0,111,1441	0/0:39,0:39:99:0,99,1265	0/0:44,1:44:54.43:0,54,1129	0/0:58,0:58:99:0,105,1342	0/0:47,0:46:99:0,114,1475	0/0:52,0:50:99:0,123,1542	0/0:32,0:30:78.25:0,78,1006	0/0:80,0:70:99:0,205,2646	0/0:98,0:98:99:0,280,3538	0/0:42,0:42:99:0,102,1323	0/0:25,0:25:60.19:0,60,777	0/0:25,0:25:66.08:0,66,856	0/0:9,0:9:15.05:0,15,195	0/0:62,0:62:99:0,159,2047	0/0:21,0:21:60.19:0,60,778	0/0:101,0:101:99:0,259,3332	0/0:22,0:22:45.15:0,45,584
chr10	61540351	.	AG	A	18601.60	PASS	AB=0.690;AC=32;AF=0.593;AN=54;BaseQRankSum=22.482;DP=989;FS=0.231;HRun=1;HaplotypeScore=111.4358;InbreedingCoeff=-0.0742;MQ=75.49;MQ0=0;MQRankSum=-3.663;QD=20.49;ReadPosRankSum=3.543;VQSLOD=5.0980;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,19:19:48.16:671,48,0	0/1:9,7:16:99:246,0,383	0/0:30,0:30:75.03:0,75,1306	0/0:20,0:20:56.78:0,57,873	1/1:0,36:36:99:1463,105,0	1/1:0,21:20:57.19:797,57,0	1/1:0,17:17:51.17:713,51,0	./.	1/1:0,67:67:99:2643,190,0	0/1:21,33:54:99:1217,0,844	0/1:26,16:42:99:545,0,1099	0/1:8,21:29:99:716,0,278	0/1:23,19:42:99:592,0,975	0/1:25,23:48:99:743,0,1007	0/1:33,21:54:99:641,0,1397	0/1:12,19:31:99:665,0,485	0/1:13,21:34:99:740,0,524	1/1:0,15:15:39.13:545,39,0	0/1:30,15:45:99:496,0,1259	0/1:70,32:102:99:951,0,3047	0/1:28,17:45:99:500,0,1211	1/1:0,26:26:72.24:1007,72,0	1/1:0,18:18:48.16:671,48,0	1/1:0,14:14:39.13:545,39,0	0/1:24,14:38:99:434,0,1018	0/0:23,0:23:69.23:0,69,1077	0/1:62,33:95:99:1060,0,2662	0/0:8,0:8:24.08:0,24,384
chr10	61541366	.	T	TC	44902.71	PASS	AC=50;AF=0.926;AN=54;BaseQRankSum=3.310;DP=1135;FS=6.311;HRun=1;HaplotypeScore=233.8896;InbreedingCoeff=0.9830;MQ=71.32;MQ0=2;MQRankSum=-9.577;QD=41.12;ReadPosRankSum=5.756;VQSLOD=3.4617;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,43:44:99:1887,126,0	1/1:0,18:18:51.17:764,51,0	0/0:19,0:19:50.95:0,51,630	0/0:24,0:24:50.81:0,51,679	1/1:1,31:32:90.30:1342,90,0	1/1:3,19:22:51.17:763,51,0	1/1:2,18:20:51.17:764,51,0	./.	1/1:1,72:73:99:3091,208,0	1/1:0,52:52:99:2275,154,0	1/1:0,33:33:96.32:1429,96,0	1/1:0,38:38:99:1617,108,0	1/1:0,65:65:99:2776,187,0	1/1:1,49:50:99:2153,144,0	1/1:0,67:67:99:2920,196,0	1/1:2,49:51:99:2066,138,0	1/1:3,36:39:99:1556,105,0	1/1:0,11:11:30.10:449,30,0	1/1:5,47:49:99:2020,135,0	1/1:3,96:100:99:4154,280,0	1/1:2,90:92:99:3557,241,0	1/1:0,14:14:39.13:583,39,0	1/1:2,11:13:24.08:358,24,0	1/1:0,20:20:51.17:764,51,0	1/1:2,48:50:99:2022,135,0	1/1:0,26:26:75.25:1123,75,0	1/1:4,100:104:99:4289,289,0	1/1:0,5:5:12.04:180,12,0
chr10	61541511	.	ATGGT	A	21511.39	PASS	AB=0.703;AC=18;AF=0.333;AN=54;BaseQRankSum=15.111;DP=1137;FS=2.129;HRun=0;HaplotypeScore=355.7638;InbreedingCoeff=-0.1672;MQ=56.57;MQ0=1;MQRankSum=-23.281;QD=25.22;ReadPosRankSum=-2.065;VQSLOD=3.6904;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:96.32:0,96,2516	0/1:16,15:31:99:812,0,1009	0/0:28,0:28:69.24:0,69,1712	0/0:21,0:21:63.08:0,63,1484	0/0:30,0:30:90.31:0,90,2419	0/0:25,0:24:72.25:0,72,1964	0/0:15,0:15:45.15:0,45,1225	./.	0/0:61,0:61:99:0,175,4586	0/1:44,27:71:99:1557,0,2705	0/1:37,32:69:99:1435,0,2272	0/1:32,11:43:99:669,0,1984	0/1:32,19:51:99:923,0,2368	0/1:24,24:48:99:1314,0,1654	0/1:42,18:60:99:1038,0,2619	0/1:27,13:40:99:750,0,1532	0/1:23,14:36:99:539,0,1376	0/0:17,0:17:45.15:0,45,1192	0/1:28,25:50:99:1293,0,1464	0/1:41,60:101:99:3221,0,2227	0/1:24,19:43:99:943,0,1201	0/0:18,0:18:51.18:0,51,1395	0/0:26,0:25:68.99:0,69,1883	0/0:10,0:10:21.07:0,21,574	0/1:30,23:53:99:1149,0,1731	1/1:3,25:28:81.28:1547,81,0	0/1:47,68:115:99:3771,0,2438	1/1:2,8:10:30.10:551,30,0
chr10	61541521	.	G	GA	39717.89	PASS	AC=50;AF=0.926;AN=54;BaseQRankSum=-0.394;DP=1128;FS=7.887;HRun=2;HaplotypeScore=227.3491;InbreedingCoeff=0.9968;MQ=58.16;MQ0=2;MQRankSum=-5.761;QD=36.78;ReadPosRankSum=6.503;VQSLOD=3.0026;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:2,25:27:75.25:1080,75,0	1/1:1,27:28:78.22:1084,78,0	0/0:25,0:25:72.20:0,72,859	0/0:23,0:23:59.90:0,60,719	1/1:0,31:32:84.28:1204,84,0	1/1:0,25:24:69.23:994,69,0	1/1:0,18:18:42.14:605,42,0	./.	1/1:2,57:59:99:2203,154,0	1/1:10,58:69:99:2757,199,0	1/1:4,64:68:99:2360,174,0	1/1:2,35:37:99:1409,99,0	1/1:5,53:58:99:2042,144,0	1/1:3,45:48:99:1836,132,0	1/1:10,50:60:99:2299,166,0	1/1:2,39:41:99:1485,105,0	1/1:7,32:38:90.26:1242,90,0	1/1:0,16:16:45.15:648,45,0	1/1:7,44:47:99:1758,126,0	1/1:5,101:107:99:3920,290,0	1/1:5,34:38:84.24:1169,84,0	1/1:0,21:21:54.14:754,54,0	1/1:0,29:28:72.24:1037,72,0	1/1:0,9:9:21.07:302,21,0	1/1:2,45:47:99:1772,126,0	1/1:2,26:27:78.24:1083,78,0	1/1:7,109:115:99:4339,313,0	1/1:0,8:8:24.08:335,24,0
chr10	61541868	.	TA	T	24521.03	PASS	AC=50;AF=0.926;AN=54;BaseQRankSum=-2.850;DP=1026;FS=5.654;HRun=8;HaplotypeScore=104.3535;InbreedingCoeff=0.9906;MQ=64.61;MQ0=0;MQRankSum=-3.145;QD=24.64;ReadPosRankSum=4.991;VQSLOD=4.6804;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,23:28:63.09:608,63,0	1/1:1,14:15:39.06:377,39,0	0/0:14,0:13:30.07:0,30,342	0/0:17,0:17:14.75:0,15,376	1/1:2,30:32:81.12:782,81,0	1/1:3,15:18:45.07:434,45,0	1/1:0,15:15:42.07:406,42,0	./.	1/1:4,58:62:99:1448,150,0	1/1:4,53:57:99:1518,159,0	1/1:4,63:67:99:1627,171,0	1/1:0,28:28:66.11:637,66,0	1/1:3,41:44:99:1072,111,0	1/1:4,35:39:93.15:898,93,0	1/1:7,40:47:99:1043,108,0	1/1:4,38:42:99:1014,105,0	1/1:3,43:46:99:1159,120,0	1/1:1,11:12:33.05:319,33,0	1/1:9,54:63:99:1522,159,0	1/1:4,105:109:99:2897,306,0	1/1:6,30:36:78.12:753,78,0	1/1:0,18:18:54.04:512,54,0	1/1:1,21:22:63.10:608,63,0	1/1:1,14:15:36.05:348,36,0	1/1:4,36:40:99:1014,105,0	1/1:2,17:19:51.05:485,51,0	1/1:10,94:104:99:2577,267,0	1/1:0,17:17:48.08:463,48,0
chr10	61542411	.	A	AGAGGAACACTCC	106077.19	PASS	AC=50;AF=0.926;AN=54;BaseQRankSum=-4.922;DP=849;FS=0.590;HRun=0;HaplotypeScore=251.8441;InbreedingCoeff=0.8775;MQ=44.99;MQ0=1;MQRankSum=-7.471;QD=131.45;ReadPosRankSum=4.419;VQSLOD=4.7585;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,8:16:36.08:1711,36,0	1/1:5,17:26:63.22:3754,63,0	0/0:17,0:17:51.17:0,51,1599	0/0:25,0:25:69.45:0,69,2465	1/1:5,9:18:33.11:1982,33,0	1/1:7,9:20:39.13:2376,39,0	1/1:11,6:21:39.13:2095,39,0	./.	1/1:14,29:50:99:6617,114,0	1/1:15,25:47:99:6687,126,0	1/1:10,27:39:99:5886,99,0	1/1:6,22:30:84.25:4989,84,0	1/1:18,29:51:99:7566,129,0	1/1:8,34:47:99:6986,117,0	1/1:10,20:34:78.27:4620,78,0	1/1:7,25:34:93.28:5516,93,0	1/1:4,11:19:42.06:2463,42,0	1/1:5,1:8:2.09:477,2,0	1/1:20,17:35:81.26:3876,81,0	1/1:23,57:91:99:11231,198,0	1/1:8,8:21:21.07:1171,21,0	1/1:4,9:14:36.12:2014,36,0	1/1:2,15:20:60.21:3667,60,0	1/1:0,4:6:9.03:570,9,0	1/1:18,21:41:96.33:5645,96,0	1/1:4,18:23:51.18:3097,51,0	1/1:21,43:80:99:9760,166,0	1/1:2,6:8:24.08:1321,24,0
chr10	61542916	.	GA	G	32014.15	PASS	AC=50;AF=0.926;AN=54;BaseQRankSum=-3.673;DP=1209;FS=0.553;HRun=6;HaplotypeScore=129.0907;InbreedingCoeff=0.9958;MQ=65.49;MQ0=1;MQRankSum=-5.526;QD=27.67;ReadPosRankSum=7.398;VQSLOD=2.7581;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,35:38:71.68:943,72,0	1/1:1,25:26:69.17:741,69,0	0/0:26,0:24:50.95:0,51,706	0/0:25,0:22:57.17:0,57,721	1/1:1,23:23:60.15:645,60,0	1/1:1,28:29:65.09:822,65,0	1/1:0,19:19:51.13:548,51,0	./.	1/1:4,78:82:99:2288,214,0	1/1:9,58:67:99:1879,180,0	1/1:4,34:38:99:1063,99,0	1/1:1,33:34:90.23:967,90,0	1/1:5,49:54:99:1289,120,0	1/1:6,52:58:99:1547,144,0	1/1:3,60:63:99:1708,159,0	1/1:3,48:51:99:1482,138,0	1/1:6,71:77:99:2051,184,0	1/1:2,23:25:57.71:669,58,0	1/1:3,67:70:99:2108,201,0	1/1:7,78:85:99:2446,229,0	1/1:4,58:62:99:1639,153,0	1/1:6,19:25:60.09:629,60,0	1/1:0,21:21:54.14:580,54,0	1/1:2,23:25:66.16:709,66,0	1/1:3,57:60:99:1727,152,0	1/1:3,19:22:57.09:593,57,0	1/1:3,93:96:99:2748,258,0	1/1:0,6:6:18.05:193,18,0
chr10	61543229	.	A	AT	16269.57	PASS	AB=0.665;AC=18;AF=0.333;AN=54;BaseQRankSum=-8.025;DP=1198;FS=10.134;HRun=2;HaplotypeScore=155.8016;InbreedingCoeff=-0.1685;MQ=63.58;MQ0=0;MQRankSum=-1.606;QD=19.10;ReadPosRankSum=1.044;VQSLOD=3.7852;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,141,1717	0/1:10,9:19:99:330,0,304	0/0:28,0:28:78.21:0,78,912	0/0:29,0:28:71.16:0,71,877	0/0:24,0:24:72.21:0,72,879	0/0:28,0:28:81.19:0,81,962	0/0:30,0:30:81.21:0,81,975	./.	0/0:61,0:61:99:0,184,2212	0/1:30,27:56:99:1004,0,806	0/1:33,26:59:99:876,0,815	0/1:27,18:45:99:610,0,746	0/1:28,22:50:99:803,0,819	0/1:25,25:50:99:896,0,631	0/1:30,30:60:99:957,0,879	0/1:36,20:56:99:621,0,1095	0/1:25,37:62:99:1222,0,603	0/0:26,0:26:75.15:0,75,893	0/1:28,37:64:99:1310,0,488	0/1:32,50:82:99:1796,0,811	0/1:22,63:85:99:2307,0,539	0/0:22,0:22:63.17:0,63,756	0/0:15,0:15:39.12:0,39,483	0/0:32,0:32:93.26:0,93,1119	0/1:21,16:37:99:542,0,628	1/1:0,23:24:72.20:997,72,0	0/1:37,56:92:99:1740,0,1042	1/1:0,8:8:18.06:259,18,0
chr10	61543809	.	CA	C	2994.14	PASS	AB=0.590;AC=11;AF=0.204;AN=54;BaseQRankSum=-2.179;DP=764;FS=2.973;HRun=4;HaplotypeScore=125.2574;InbreedingCoeff=0.8842;MQ=70.17;MQ0=0;MQRankSum=-0.825;QD=24.74;ReadPosRankSum=1.888;VQSLOD=2.1899;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:30.10:0,30,420	0/0:15,0:15:42.11:0,42,588	0/0:28,0:28:66.21:0,66,895	0/0:18,0:18:42.05:0,42,524	0/0:22,0:22:60.19:0,60,823	1/1:0,17:17:48.15:576,48,0	1/1:1,8:9:24.07:288,24,0	./.	0/1:19,43:62:99:1301,0,518	0/0:52,0:52:99:0,141,1866	0/0:34,0:34:90.28:0,90,1227	0/0:22,0:22:63.21:0,63,881	0/0:35,0:35:99:0,99,1386	0/0:27,0:27:81.27:0,81,1134	0/0:40,0:40:99:0,117,1605	0/0:32,0:32:93.30:0,93,1286	0/0:42,0:42:99:0,120,1658	0/0:15,0:15:42.13:0,42,571	0/0:34,0:34:99:0,99,1355	0/0:46,0:46:99:0,123,1672	0/0:33,0:33:96.29:0,96,1292	1/1:2,12:14:36.11:432,36,0	1/1:1,8:9:24.07:286,24,0	1/1:0,10:10:24.07:288,24,0	0/0:24,0:24:72.23:0,72,992	0/0:12,0:12:33.08:0,33,415	0/0:86,0:86:99:0,235,3182	0/0:15,0:15:45.15:0,45,630
chr10	61544750	.	G	GT	31470.49	PASS	AC=50;AF=0.926;AN=54;BaseQRankSum=-8.391;DP=968;FS=13.733;HRun=5;HaplotypeScore=83.4625;InbreedingCoeff=0.9982;MQ=66.52;MQ0=2;MQRankSum=2.105;QD=33.73;ReadPosRankSum=6.131;VQSLOD=3.5147;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,20:24:60.20:789,60,0	1/1:1,16:17:42.14:553,42,0	0/0:24,0:23:58.75:0,59,578	0/0:11,0:10:26.98:0,27,277	1/1:2,24:26:72.23:947,72,0	1/1:2,23:25:63.20:829,63,0	1/1:2,12:14:30.10:395,30,0	./.	1/1:6,56:62:99:1934,147,0	1/1:3,50:53:99:1943,150,0	1/1:2,52:54:99:1910,147,0	1/1:0,21:21:57.02:750,57,0	1/1:5,31:36:61.09:1151,61,0	1/1:2,26:28:66.20:868,66,0	1/1:0,43:43:99:1579,120,0	1/1:1,28:29:81.26:1066,81,0	1/1:3,46:49:99:1724,132,0	1/1:2,11:13:26.12:424,26,0	1/1:6,50:56:99:1876,150,0	1/1:8,92:100:99:3332,265,0	1/1:4,42:46:99:1499,114,0	1/1:0,23:23:66.13:829,66,0	1/1:3,22:25:60.20:790,60,0	1/1:0,15:15:45.15:592,45,0	1/1:0,44:44:99:1461,111,0	1/1:0,27:27:81.25:1052,81,0	1/1:12,80:92:99:2783,214,0	1/1:0,10:10:30.10:395,30,0
chr10	61545332	.	G	GTCTCTC	13956.40	PASS	AB=0.837;AC=27;AF=0.500;AN=54;BaseQRankSum=-12.744;DP=1119;FS=11.477;HRun=0;HaplotypeScore=339.2231;InbreedingCoeff=-0.2592;MQ=64.80;MQ0=4;MQRankSum=-6.628;QD=14.26;ReadPosRankSum=-1.014;VQSLOD=2.1855;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,117,2398	0/1:14,4:19:99:292,0,627	0/0:32,0:28:13.82:0,14,477	0/1:55,0:43:13.07:13,0,543	0/0:16,0:16:39.09:0,39,765	1/1:1,0:23:51.17:662,51,0	1/1:7,0:21:33.11:427,33,0	./.	0/1:36,0:78:99:1090,0,1178	0/1:38,2:37:99:499,0,874	0/1:35,4:40:99:738,0,830	0/1:24,5:28:99:291,0,837	0/1:35,18:58:99:1012,0,1292	0/1:41,11:49:99:959,0,1458	0/1:36,19:56:99:482,0,1633	0/1:38,8:44:99:697,0,1394	0/1:41,4:49:99:402,0,1340	0/0:26,0:26:60.13:0,60,1218	0/1:35,2:35:99:491,0,593	0/1:63,5:71:99:1457,0,695	0/1:59,2:63:99:840,0,1593	1/1:2,0:22:57.19:743,57,0	1/1:7,0:22:29.28:389,29,0	1/1:3,0:22:23.18:312,23,0	0/1:30,4:38:99:324,0,1156	0/1:28,1:29:32.72:33,0,1169	0/1:56,19:68:99:1803,0,1102	0/0:21,0:21:39.03:0,39,678
chr10	61545877	.	TTTG	T	5150.89	PASS	AB=0.717;AC=24;AF=0.500;AN=48;BaseQRankSum=-3.209;DP=828;FS=1.086;HRun=0;HaplotypeScore=110.0766;InbreedingCoeff=-0.2401;MQ=24.61;MQ0=243;MQRankSum=-1.589;QD=8.14;ReadPosRankSum=1.211;VQSLOD=4.3319;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	0/1:9,7:6:36.08:36,0,186	./.	./.	0/0:20,0:12:11.93:0,12,203	1/1:1,18:16:15.01:212,15,0	1/1:6,9:7:3.01:48,3,0	./.	0/1:27,28:37:99:196,0,615	0/1:28,21:39:99:647,0,1071	0/1:17,6:16:99:117,0,368	0/1:19,3:15:2.01:2,0,312	0/1:29,16:26:99:277,0,231	0/1:21,13:22:99:120,0,306	0/1:28,12:29:99:134,0,241	0/1:32,18:31:99:277,0,771	0/1:21,14:16:53.94:132,0,54	0/0:15,0:8:12.04:0,12,237	0/1:20,24:19:87.09:576,0,87	0/1:17,22:26:99:447,0,323	0/0:28,20:11:3.01:0,3,39	1/1:1,5:5:12.04:192,12,0	1/1:2,9:8:11.49:192,11,0	1/1:2,12:7:9.03:144,9,0	0/1:26,15:28:99:364,0,767	0/0:23,0:15:45.15:0,45,991	0/1:27,48:55:99:1037,0,306	0/0:11,0:7:5.69:0,6,132
chr10	61546142	.	ATG	A	7019.51	PASS	AB=0.819;AC=38;AF=0.731;AN=52;BaseQRankSum=5.157;DP=471;FS=2.198;HRun=0;HaplotypeScore=79.3500;InbreedingCoeff=0.1570;MQ=51.19;MQ0=3;MQRankSum=-4.317;QD=15.70;ReadPosRankSum=6.351;VQSLOD=4.6549;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:12,0:12:11.10:47,0,11	0/1:3,1:4:29.94:30,0,35	0/0:13,0:9:14.98:0,15,184	0/0:6,0:6:4.52:0,5,58	1/1:18,0:18:9.31:174,9,0	1/1:0,11:10:21.07:272,21,0	1/1:1,2:3:3.01:39,3,0	./.	1/1:9,10:18:35.54:355,36,0	0/1:14,16:29:2.20:547,0,2	1/1:19,13:31:31.74:521,32,0	0/1:9,1:9:9.28:60,0,9	0/1:12,2:14:21.22:150,0,21	1/1:9,3:11:23.45:183,23,0	1/1:10,7:14:5.80:245,6,0	1/1:15,5:19:35.71:334,36,0	0/1:23,13:36:57.64:416,0,58	1/1:9,0:8:17.50:103,18,0	0/1:8,10:18:4.47:342,0,4	1/1:28,36:62:68.03:1187,68,0	1/1:5,10:15:26.51:254,27,0	./.	1/1:1,7:8:21.07:272,21,0	1/1:0,6:6:15.05:195,15,0	1/1:28,10:35:42.68:601,43,0	0/1:14,1:15:28:135,0,28	1/1:26,10:33:59.39:558,59,0	0/0:4,0:4:5.96:0,6,43
chr10	61546152	.	GTA	G	7041.81	PASS	AC=46;AF=0.920;AN=50;BaseQRankSum=-1.147;DP=441;FS=1.108;HRun=0;HaplotypeScore=75.8537;InbreedingCoeff=0.6312;MQ=48.32;MQ0=3;MQRankSum=-2.553;QD=16.73;ReadPosRankSum=4.979;VQSLOD=4.3787;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,5:7:9.03:115,9,0	1/1:4,0:4:2.98:21,3,0	0/0:10,0:6:14.97:0,15,207	0/0:7,0:7:3.06:0,3,92	1/1:1,17:18:33.06:401,33,0	1/1:11,0:10:20.83:147,21,0	1/1:3,0:3:2.84:14,3,0	./.	1/1:13,5:17:35.38:312,35,0	1/1:21,8:25:58.29:487,58,0	1/1:18,9:27:53.20:484,53,0	1/1:5,5:9:12.04:153,12,0	1/1:9,4:13:14.64:149,15,0	1/1:5,9:13:24.01:271,24,0	1/1:10,5:12:26.50:236,27,0	1/1:7,8:14:32.94:334,33,0	1/1:23,9:32:50.35:464,50,0	1/1:2,7:8:18.06:227,18,0	1/1:14,3:17:13:226,13,0	1/1:46,16:61:99:1050,122,0	1/1:10,4:14:26.24:222,26,0	./.	1/1:9,0:9:20.51:129,21,0	1/1:6,0:6:14.67:92,15,0	1/1:20,17:34:65.66:653,66,0	1/1:4,10:14:33.06:401,33,0	1/1:22,15:34:3.61:456,4,0	./.
chr10	61546652	.	TC	T	1306.77	PASS	AB=0.643;AC=1;AF=0.019;AN=54;BaseQRankSum=11.194;DP=1132;FS=3.950;HRun=1;HaplotypeScore=125.0738;InbreedingCoeff=-0.0301;MQ=63.80;MQ0=0;MQRankSum=1.797;QD=15.74;ReadPosRankSum=-0.412;VQSLOD=3.5917;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:57:99:0,171,2597	0/0:31,0:31:87.30:0,87,1386	0/0:27,0:25:75.22:0,75,1102	0/0:20,0:18:53.99:0,54,791	0/0:31,0:31:90.31:0,90,1426	0/0:29,0:29:80.21:0,80,459	0/0:25,0:25:63.96:0,64,354	./.	0/1:37,46:83:99:1381,0,1079	0/0:43,0:43:99:0,129,2013	0/0:42,0:42:99:0,123,1817	0/0:45,0:45:99:0,135,2050	0/0:58,0:58:99:0,172,2606	0/0:38,0:38:99:0,111,1734	0/0:53,0:53:99:0,159,2433	0/0:53,0:53:99:0,153,2386	0/0:45,0:45:99:0,132,2015	0/0:17,0:17:48.16:0,48,764	0/0:71,0:70:99:0,205,3023	0/0:64,0:64:99:0,174,2652	0/0:105,0:105:99:0,313,4846	0/0:20,0:20:2.18:0,2,199	0/0:18,0:18:28.60:0,29,243	0/0:23,0:23:58.52:0,59,324	0/0:28,0:28:78.22:0,78,1183	0/0:21,0:21:63.19:0,63,957	0/0:83,0:83:99:0,244,3803	0/0:2,0:1:6.02:0,6,95
chr10	61547331	.	TC	T	1012.99	PASS	AC=38;AF=0.950;AN=40;DP=269;FS=0.000;HRun=1;HaplotypeScore=31.7381;InbreedingCoeff=-0.0107;MQ=25.67;MQ0=92;QD=4.31;VQSLOD=0.1789;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,6:2:6.01:57,6,0	1/1:1,8:1:3:29,3,0	./.	0/0:18,0:2:0.47:0,0,1	1/1:0,11:5:9.02:87,9,0	1/1:0,5:1:3:29,3,0	1/1:0,3:2:6.01:58,6,0	./.	1/1:2,14:1:3:29,3,0	1/1:2,15:4:3:28,3,0	1/1:7,14:7:15.02:142,15,0	1/1:3,6:1:3:29,3,0	1/1:0,6:2:6.01:57,6,0	1/1:0,12:1:3:29,3,0	./.	1/1:2,13:1:3:29,3,0	./.	./.	1/1:4,9:3:9.01:86,9,0	1/1:1,36:7:18.03:174,18,0	./.	1/1:0,12:2:3:29,3,0	1/1:2,11:5:12.02:119,12,0	./.	1/1:0,9:1:3:29,3,0	1/1:2,4:1:2.97:20,3,0	1/1:4,11:1:3:29,3,0	./.
chr10	61547462	.	CT	C	195.60	PASS	AC=14;AF=0.875;AN=16;DP=21;FS=0.000;HRun=1;HaplotypeScore=20.8635;MQ=22.17;MQ0=2;QD=13.97;VQSLOD=2.3507;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	1/1:0,1:1:3.01:39,3,0	./.	./.	./.	./.	./.	./.	./.	./.	0/0:0,2:2:0:0,0,0	1/1:0,1:1:3.01:39,3,0	1/1:0,1:1:3.01:36,3,0	./.	./.	./.	./.	./.	./.	1/1:0,7:6:3.01:37,3,0	./.	1/1:0,1:1:3.01:39,3,0	./.	./.	1/1:0,1:1:3.01:39,3,0	1/1:0,2:1:3.01:36,3,0	./.	./.
chr10	61548543	.	T	TGAA	423.89	PASS	AB=0.764;AC=7;AF=0.175;AN=40;BaseQRankSum=2.992;DP=939;FS=2.204;HRun=0;HaplotypeScore=23.4004;InbreedingCoeff=-0.1017;MQ=19.80;MQ0=423;MQRankSum=0.935;QD=1.77;ReadPosRankSum=0.358;VQSLOD=1.1184;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	0/1:19,9:14:44.24:44,0,263	./.	./.	0/0:29,0:10:12.04:0,12,189	0/0:26,0:10:6.02:0,6,95	./.	1/1:2,9:3:3.01:66,3,0	./.	0/1:36,9:21:73.81:74,0,702	0/1:26,11:15:56.21:56,0,86	0/0:26,1:14:6.02:0,6,95	0/0:30,2:16:5.92:0,6,95	0/0:41,4:16:6.02:0,6,95	0/0:32,3:17:3.01:0,3,47	0/0:33,3:15:11.97:0,12,160	0/0:33,11:11:6.02:0,6,90	./.	0/0:26,7:5:15.05:0,15,237	0/1:39,36:32:91.02:240,0,91	0/0:35,11:16:3.01:0,3,48	0/0:38,0:24:20.97:0,21,279	0/0:28,0:14:5.92:0,6,94	./.	0/1:29,11:19:56.31:56,0,86	0/0:40,0:18:51.17:0,51,807	0/0:27,4:13:2.73:0,3,47	./.
chr10	61548868	.	T	TTTG	9655.46	PASS	AB=0.788;AC=20;AF=0.370;AN=54;BaseQRankSum=15.834;DP=899;FS=5.891;HRun=0;HaplotypeScore=106.6004;InbreedingCoeff=-0.1443;MQ=38.58;MQ0=150;MQRankSum=-4.761;QD=14.99;ReadPosRankSum=6.541;VQSLOD=3.6324;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,34:31:87.30:2000,87,0	0/1:17,7:18:99:171,0,424	0/0:38,0:8:18.04:0,18,280	0/0:22,0:2:3.01:0,3,51	1/1:3,11:12:24.08:552,24,0	0/0:16,0:16:36.09:0,36,570	0/0:26,0:22:45.15:0,45,763	0/0:21,0:19:51.16:0,51,844	./.	0/1:30,8:33:99:318,0,1169	0/1:20,5:14:99:180,0,253	0/1:31,7:31:99:276,0,848	0/1:29,9:27:99:285,0,646	0/1:25,11:30:99:416,0,662	0/1:31,6:29:99:284,0,670	0/1:41,14:47:99:726,0,1022	0/1:31,10:34:99:460,0,1027	1/1:2,3:3:9.03:207,9,0	0/1:22,12:27:99:576,0,564	0/1:35,33:53:99:1219,0,906	0/1:47,27:69:99:1040,0,1447	0/0:28,0:21:45.08:0,45,704	0/0:26,0:14:24.08:0,24,384	0/0:33,0:28:63.20:0,63,1032	0/1:22,8:25:99:227,0,564	0/0:31,0:26:78.26:0,78,1301	0/1:35,13:42:99:719,0,1072	0/0:8,0:8:18.06:0,18,307
chr10	61549128	.	CGTGT	C	616.28	PASS	AB=0.867;AC=27;AF=0.540;AN=50;BaseQRankSum=-1.730;DP=522;FS=27.234;HRun=0;HaplotypeScore=76.7421;InbreedingCoeff=0.3058;MQ=30.35;MQ0=176;MQRankSum=3.114;QD=2.13;ReadPosRankSum=1.711;VQSLOD=-0.0777;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	1/1:7,0:3:0.47:1,0,0	0/0:35,0:7:18.52:0,19,303	0/0:30,0:3:9.03:0,9,185	0/0:16,0:12:3.01:0,3,46	0/1:30,0:21:19.09:210,0,19	1/1:19,0:8:15.05:195,15,0	0/0:24,0:11:33.10:0,33,529	0/0:14,0:5:6.49:0,6,68	0/0:30,0:25:14.50:0,14,145	1/1:18,0:12:2.44:47,2,0	1/1:20,0:14:0.39:3,0,0	1/1:17,0:9:6.32:60,6,0	0/0:18,0:7:3.94:0,4,29	1/1:23,0:17:2.39:39,2,0	0/0:20,0:13:2.30:0,2,49	1/1:14,0:9:2.42:39,2,0	./.	1/1:19,0:5:3.73:24,4,0	./.	1/1:15,0:7:0.44:1,0,0	0/1:7,6:11:0:0,0,0	0/1:6,6:8:0:0,0,0	1/1:9,8:9:1.81:48,2,0	1/1:19,0:12:0.91:52,1,0	0/1:18,0:15:8.01:14,0,8	0/1:28,0:18:17.33:17,0,50	0/0:7,0:6:0.47:0,0,2
chr10	61550899	.	A	AT	4650.85	PASS	AB=0.685;AC=6;AF=0.107;AN=56;BaseQRankSum=17.704;DP=1707;FS=8.830;HRun=1;HaplotypeScore=174.6510;InbreedingCoeff=-0.1200;MQ=57.58;MQ0=67;MQRankSum=-0.405;QD=15.55;ReadPosRankSum=2.243;VQSLOD=4.4177;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:76,0:75:99:0,219,2711	0/0:30,0:30:84.26:0,84,1076	0/0:21,0:10:29.27:0,29,335	0/0:23,0:15:42.10:0,42,517	0/0:65,0:63:99:0,184,2358	0/1:19,15:31:99:404,0,636	0/1:24,17:39:99:516,0,784	0/0:28,0:27:75.16:0,75,912	0/1:30,59:86:99:1926,0,858	0/0:88,0:85:99:0,253,3227	0/0:84,0:83:99:0,231,2937	0/0:63,0:61:99:0,181,2294	0/0:72,0:70:99:0,205,2571	0/0:81,0:74:99:0,208,2658	0/0:70,0:65:99:0,184,2347	0/0:51,1:48:96.48:0,96,1717	0/0:69,0:67:99:0,174,2170	0/0:50,0:49:99:0,144,1836	0/0:75,0:61:99:0,168,2102	0/0:122,0:120:99:0,319,4110	0/0:103,0:100:99:0,280,3501	0/1:26,15:38:99:434,0,742	0/1:27,20:44:99:689,0,691	0/1:24,23:47:99:682,0,780	0/0:69,0:69:99:0,193,2449	0/0:54,0:53:99:0,150,1901	0/0:99,0:90:99:0,262,3314	0/0:14,0:14:39.04:0,39,484
chr10	61551349	.	CA	C	387.88	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.279;DP=603;FS=17.684;HRun=5;HaplotypeScore=73.3865;InbreedingCoeff=0.7833;MQ=57.66;MQ0=42;MQRankSum=0.008;QD=15.52;ReadPosRankSum=1.427;VQSLOD=2.1851;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:15:45.13:0,45,595	0/0:7,0:6:18.06:0,18,246	0/0:8,0:5:15.04:0,15,179	0/0:8,0:6:12:0,12,133	0/0:25,0:23:63.21:0,63,854	0/0:19,0:17:48.14:0,48,626	0/0:11,0:11:30.06:0,30,389	0/0:33,0:32:90.25:0,90,1195	1/1:10,15:18:7.17:469,7,0	0/0:25,0:21:57.19:0,57,775	0/0:46,0:32:84.27:0,84,1126	0/0:21,0:19:45.15:0,45,613	0/0:24,0:21:51.17:0,51,697	0/0:13,0:12:27.09:0,27,365	0/0:18,0:13:30.09:0,30,395	0/0:27,0:21:57.19:0,57,777	0/0:38,0:33:87.29:0,87,1189	0/0:33,0:31:84.28:0,84,1133	0/0:27,0:23:63.19:0,63,833	0/0:35,0:25:48.16:0,48,656	0/0:13,0:13:30.10:0,30,408	0/0:5,0:4:9.03:0,9,123	0/0:5,0:5:12.04:0,12,164	0/0:11,0:11:33.11:0,33,449	0/0:27,0:24:51.15:0,51,673	0/0:35,0:31:84.27:0,84,1135	0/0:35,0:25:72.24:0,72,982	0/0:13,0:13:33.11:0,33,451
chr10	61552656	.	G	GTATT	2290.86	PASS	AB=0.877;AC=17;AF=0.354;AN=48;BaseQRankSum=-7.661;DP=428;FS=9.439;HRun=0;HaplotypeScore=61.7853;InbreedingCoeff=-0.1880;MQ=35.55;MQ0=66;MQRankSum=5.811;QD=8.21;ReadPosRankSum=-0.856;VQSLOD=0.8817;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:12.03:0,12,148	1/1:2,1:3:3.01:70,3,0	./.	./.	0/1:7,2:7:18.98:131,0,19	0/1:16,5:22:99:186,0,206	0/0:3,0:2:3.01:0,3,46	0/0:25,0:17:0:0,0,0	0/0:19,0:21:33.04:0,33,307	0/1:17,3:14:15.92:184,0,16	1/1:10,1:11:3.01:70,3,0	0/0:6,0:6:0.47:0,0,1	0/0:15,0:11:6.02:0,6,92	0/0:7,0:3:3.01:0,3,46	0/1:12,3:11:37:131,0,37	0/0:5,0:3:0.47:0,0,1	0/1:22,15:43:99:617,0,518	0/0:12,0:11:15.03:0,15,176	0/1:32,1:19:58.08:58,0,90	1/1:11,4:10:15.05:349,15,0	0/1:17,0:12:55.02:55,0,169	./.	0/1:4,0:3:40.01:46,0,40	./.	0/1:18,3:15:61.06:61,0,83	0/0:7,0:4:3:0,3,28	0/1:31,4:22:99:355,0,254	0/1:12,0:11:44.09:114,0,44
chr10	61553468	.	TG	T	16432.26	PASS	AB=0.535;AC=33;AF=0.589;AN=56;BaseQRankSum=11.633;DP=671;FS=1.676;HRun=1;HaplotypeScore=73.7214;InbreedingCoeff=0.6327;MQ=69.32;MQ0=1;MQRankSum=-1.900;QD=37.09;ReadPosRankSum=5.444;VQSLOD=5.1914;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,32:34:33.71:1195,34,0	0/1:2,8:10:67.82:267,0,68	0/0:25,0:20:18.16:0,18,547	0/0:12,0:11:29.96:0,30,428	1/1:0,26:26:78.22:1068,78,0	0/0:24,0:24:72.25:0,72,1148	0/0:25,0:25:75.22:0,75,1145	0/0:33,0:33:96.30:0,96,1469	0/0:26,0:26:78.27:0,78,1243	1/1:1,34:34:54.85:1316,55,0	0/1:2,18:20:37.62:633,0,38	1/1:0,23:23:63.21:881,63,0	1/1:0,25:25:69.23:960,69,0	1/1:0,19:19:57.19:797,57,0	1/1:0,28:28:75.25:1049,75,0	1/1:0,28:28:75.25:1049,75,0	1/1:0,15:15:45.15:629,45,0	1/1:0,21:21:60.20:839,60,0	1/1:1,16:16:48.14:638,48,0	0/1:2,25:27:13.63:925,0,14	1/1:0,21:21:57.19:797,57,0	0/0:34,0:34:99:0,102,1579	0/0:24,0:24:72.21:0,72,1095	0/0:25,0:25:75.24:0,75,1172	0/1:4,30:34:93.34:1078,0,93	1/1:0,26:26:78.26:1091,78,0	1/1:0,21:21:57.19:797,57,0	0/1:2,11:13:56:422,0,56
chr10	61553627	.	T	TGCAG	1264.30	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-6.256;DP=684;FS=22.969;HRun=0;HaplotypeScore=109.7936;InbreedingCoeff=0.9693;MQ=83.60;MQ0=0;MQRankSum=-2.907;QD=57.47;ReadPosRankSum=0.559;VQSLOD=3.1014;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,126,2329	0/0:12,0:12:30.09:0,30,528	0/0:30,0:30:75.13:0,75,1261	0/0:25,0:25:63.17:0,63,1095	0/0:16,0:16:48.16:0,48,880	0/0:22,0:22:63.19:0,63,1113	0/0:37,0:37:99:0,102,1839	0/0:27,0:27:75.24:0,75,1354	1/1:2,19:21:51.18:1359,51,0	0/0:25,0:25:75.26:0,75,1400	0/0:17,0:17:39.13:0,39,707	0/0:24,0:24:66.23:0,66,1217	0/0:24,0:24:60.16:0,60,1083	0/0:18,0:18:51.16:0,51,921	0/0:34,0:34:96.33:0,96,1783	0/0:21,0:21:60.19:0,60,1088	0/0:27,0:27:69.21:0,69,1236	0/0:19,0:19:51.15:0,51,900	0/0:22,0:22:63.21:0,63,1122	0/0:29,0:29:84.29:0,84,1554	0/0:66,0:66:99:0,196,3589	0/0:17,0:17:48.16:0,48,895	0/0:11,0:11:30.09:0,30,529	0/0:25,0:25:69.21:0,69,1246	0/0:23,0:23:66.21:0,66,1201	0/0:21,0:21:63.22:0,63,1168	0/0:18,0:18:48.16:0,48,871	0/0:4,0:4:12.04:0,12,224
chr10	61557553	.	GA	G	455.77	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.000;DP=622;FS=1.986;HRun=7;HaplotypeScore=64.0917;InbreedingCoeff=0.9890;MQ=62.87;MQ0=1;MQRankSum=-0.353;QD=18.23;ReadPosRankSum=1.563;VQSLOD=3.5384;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:45.13:0,45,553	0/0:10,0:10:27.09:0,27,340	0/0:24,0:23:46.92:0,47,543	0/0:19,0:19:51.48:0,51,598	0/0:28,0:28:69.21:0,69,847	0/0:14,0:14:42.13:0,42,526	0/0:9,0:9:24.07:0,24,291	0/0:37,0:37:99:0,105,1279	1/1:4,21:25:54.12:551,54,0	0/0:22,0:22:66.21:0,66,830	0/0:20,0:20:54.16:0,54,666	0/0:20,0:20:57.13:0,57,698	0/0:18,0:18:45.14:0,45,555	0/0:24,0:24:60.19:0,60,753	0/0:30,0:30:81.19:0,81,999	0/0:25,0:24:72.18:0,72,887	0/0:23,0:23:63.20:0,63,793	0/0:20,0:20:54.17:0,54,678	0/0:26,0:26:63.20:0,63,781	0/0:24,0:24:69.21:0,69,857	0/0:24,0:23:63.18:0,63,768	0/0:25,0:25:72.20:0,72,888	0/0:31,0:31:75.20:0,75,912	0/0:16,0:16:48.11:0,48,586	0/0:24,0:24:60.18:0,60,743	0/0:32,0:32:90.28:0,90,1122	0/0:29,0:29:84.27:0,84,1053	0/0:7,0:7:18.06:0,18,226
chr10	61558775	.	TC	T	1840.58	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=10.476;DP=574;FS=8.465;HRun=9;HaplotypeScore=58.8374;InbreedingCoeff=0.8493;MQ=65.21;MQ0=8;MQRankSum=0.834;QD=14.38;ReadPosRankSum=-1.885;VQSLOD=2.6871;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:43,1:44:83.87:0,84,1216	0/0:7,0:7:15.01:0,15,159	0/0:25,0:11:11.37:0,11,112	0/0:23,0:6:2.84:0,3,14	0/0:25,0:25:63.12:0,63,677	1/1:4,18:21:39.01:357,39,0	1/1:5,19:24:45.02:412,45,0	0/1:26,0:24:11.33:11,0,67	0/0:18,0:18:39.10:0,39,440	0/0:18,0:17:45.05:0,45,481	0/0:16,0:16:39.12:0,39,449	0/0:24,1:25:44.75:0,45,758	0/0:14,0:14:39.12:0,39,449	0/0:21,0:21:51.08:0,51,546	0/0:19,0:19:54.12:0,54,592	0/0:16,0:15:36.08:0,36,398	0/0:30,0:30:72.84:0,73,865	0/0:9,0:9:24.05:0,24,257	0/0:18,0:18:36.08:0,36,400	0/0:21,0:21:54.15:0,54,614	0/0:22,0:22:57.17:0,57,656	1/1:0,18:18:38.92:345,39,0	1/1:3,18:21:50.89:454,51,0	1/1:1,16:17:48.02:439,48,0	0/0:18,0:18:48.09:0,48,514	0/0:18,0:18:45.11:0,45,496	0/0:24,0:24:69.18:0,69,769	0/0:13,0:13:30.09:0,30,346
chr10	61558784	.	CA	C	425.10	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=9.371;DP=579;FS=1.484;HRun=8;HaplotypeScore=66.7546;InbreedingCoeff=0.4929;MQ=69.55;MQ0=6;MQRankSum=-0.580;QD=4.21;ReadPosRankSum=-0.479;VQSLOD=-0.3221;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,125,1397	0/0:6,0:6:15.02:0,15,164	0/0:31,0:18:21.85:0,22,240	0/0:22,1:7:2.47:0,2,30	0/0:23,0:23:54.14:0,54,619	1/1:19,0:18:12.05:41,12,0	0/1:22,0:22:4.80:5,0,40	1/1:3,18:21:51.02:473,51,0	0/0:17,0:17:48.08:0,48,518	0/0:22,0:22:57.12:0,57,616	0/0:15,0:15:45.12:0,45,514	0/0:27,0:27:73.62:0,74,851	0/0:13,0:13:39.11:0,39,454	0/0:18,0:18:39.12:0,39,463	0/0:20,0:20:54.15:0,54,622	0/0:15,0:15:39.07:0,39,422	0/0:29,1:30:52.51:0,53,864	0/0:8,0:8:21.04:0,21,235	0/0:16,0:16:45.08:0,45,491	0/0:27,0:27:72.15:0,72,784	0/0:24,0:24:69.09:0,69,763	0/0:25,0:25:14.13:0,14,136	0/1:21,0:21:13.52:29,0,14	0/1:18,0:18:12.09:12,0,36	0/0:16,0:16:39.10:0,39,444	0/0:19,0:19:48.11:0,48,536	0/0:25,0:26:72.15:0,72,808	0/0:11,0:11:33.09:0,33,380
chr10	61559878	.	AT	A	760.99	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=8.337;DP=682;FS=5.094;HRun=1;HaplotypeScore=66.3279;InbreedingCoeff=0.9423;MQ=67.70;MQ0=27;MQRankSum=-4.179;QD=12.08;ReadPosRankSum=0.717;VQSLOD=2.0866;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:57,1:57:99:0,124,2478	0/0:10,0:10:30.09:0,30,447	0/0:33,0:30:78.45:0,78,1269	0/0:29,0:28:78.92:0,79,1262	0/0:23,0:23:69.23:0,69,1088	1/1:0,17:7:15.05:209,15,0	1/1:0,6:3:9.03:126,9,0	0/0:43,0:43:99:0,129,2046	0/0:20,0:20:57.18:0,57,875	0/0:22,0:22:66.22:0,66,1034	0/0:20,0:20:60.20:0,60,948	0/0:24,0:24:69.22:0,69,1060	0/0:31,0:31:93.32:0,93,1471	0/0:21,0:21:63.21:0,63,983	0/0:29,0:29:87.27:0,87,1344	0/0:31,0:31:93.30:0,93,1462	0/0:28,0:28:84.29:0,84,1343	0/0:13,1:13:39.13:0,39,623	0/0:19,0:19:57.18:0,57,879	0/0:22,0:22:66.20:0,66,1009	0/0:30,0:30:84.22:0,84,1266	1/1:0,14:2:6.02:84,6,0	1/1:0,19:12:27.06:377,27,0	1/1:0,7:4:9.03:126,9,0	0/0:33,0:33:99:0,99,1533	0/0:27,0:27:81.27:0,81,1263	0/0:41,1:41:99:0,114,1789	0/0:10,0:10:30.08:0,30,455
chr10	61568467	.	AATAG	A	3710.22	PASS	AB=0.913;AC=26;AF=0.500;AN=52;BaseQRankSum=9.427;DP=612;FS=4.009;HRun=0;HaplotypeScore=96.2064;InbreedingCoeff=0.6276;MQ=69.19;MQ0=2;MQRankSum=1.459;QD=11.70;ReadPosRankSum=1.612;VQSLOD=3.0727;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:25,1:26:26.90:27,0,322	1/1:5,4:9:12.04:183,12,0	./.	./.	0/0:21,0:21:21.07:0,21,474	0/0:28,0:28:42.14:0,42,966	0/0:15,0:15:6.58:0,7,427	0/0:31,0:31:4.21:0,4,23	1/1:12,6:18:12.04:183,12,0	0/1:24,1:25:12.73:13,0,652	0/0:34,0:34:48.15:0,48,995	1/1:18,14:32:36.12:550,36,0	1/1:11,7:18:18.06:275,18,0	1/1:5,11:16:24.08:367,24,0	1/1:16,10:26:21.07:321,21,0	0/0:13,0:24:24.08:0,24,461	1/1:10,11:21:24.08:367,24,0	0/1:9,0:13:13.98:22,0,14	1/1:11,6:16:18.06:275,18,0	1/1:15,8:23:23.97:337,24,0	1/1:10,5:15:15.05:229,15,0	0/0:19,0:19:15.05:0,15,325	0/0:23,0:23:30.10:0,30,698	0/0:26,0:26:36.05:0,36,678	0/1:24,1:25:9.76:10,0,668	0/0:20,0:20:27.08:0,27,584	1/1:17,16:33:36.12:550,36,0	0/0:7,0:17:3.01:0,3,52
chr10	61569658	.	TA	T	7488.25	PASS	AB=1.000;AC=41;AF=0.732;AN=56;BaseQRankSum=6.974;DP=561;FS=0.382;HRun=10;HaplotypeScore=61.9655;InbreedingCoeff=0.8928;MQ=77.98;MQ0=0;MQRankSum=-2.300;QD=17.74;ReadPosRankSum=4.060;VQSLOD=5.4307;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,27:30:44.97:391,45,0	1/1:0,7:7:15:130,15,0	0/1:22,0:20:4.31:4,0,227	0/0:16,0:12:15.01:0,15,131	1/1:4,20:24:44.95:389,45,0	0/0:24,1:25:40.12:0,40,671	0/0:14,0:14:42.09:0,42,454	0/0:20,0:20:57.09:0,57,596	1/1:2,17:19:38.99:339,39,0	1/1:4,27:31:50.78:666,51,0	1/1:0,12:12:29.99:260,30,0	1/1:1,20:21:41.96:365,42,0	1/1:3,18:21:44.98:391,45,0	1/1:2,23:25:47.99:417,48,0	1/1:1,20:21:53.99:469,54,0	1/1:3,15:18:44.99:391,45,0	1/1:5,21:26:62.98:547,63,0	1/1:2,17:19:47.99:417,48,0	1/1:1,12:13:35.99:313,36,0	1/1:5,19:24:50.92:434,51,0	1/1:2,6:8:12:104,12,0	0/0:27,0:27:69.18:0,69,755	0/0:20,0:20:51.13:0,51,557	0/0:17,0:17:48.13:0,48,531	1/1:3,24:27:57.87:497,58,0	1/1:4,9:13:26.96:230,27,0	1/1:6,23:29:2.58:476,3,0	1/1:0,11:11:29.99:260,30,0
chr10	61572803	.	GA	G	777.08	PASS	AB=1.000;AC=4;AF=0.071;AN=56;BaseQRankSum=-0.004;DP=492;FS=3.409;HRun=7;HaplotypeScore=85.7732;InbreedingCoeff=0.4514;MQ=74.22;MQ0=0;MQRankSum=-1.120;QD=11.96;ReadPosRankSum=-9.348;VQSLOD=0.2899;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:24.74:0,25,238	0/0:6,0:6:17.37:0,17,97	0/0:12,0:12:30.08:0,30,365	0/0:11,0:11:15.01:0,15,165	0/0:26,0:26:44.51:0,45,363	0/0:16,0:16:43.42:0,43,239	0/0:9,0:9:20.37:0,20,117	1/1:5,30:35:89.55:857,90,0	0/0:18,0:18:51.77:0,52,284	0/1:13,0:13:11.73:12,0,131	0/0:29,0:29:54.66:0,55,405	0/0:13,0:13:37.49:0,37,219	0/0:14,0:14:40.54:0,41,228	0/0:19,0:19:54.92:0,55,304	0/0:17,0:17:25.92:0,26,227	0/0:15,0:15:40.28:0,40,224	0/0:17,0:17:22.87:0,23,204	0/0:15,0:14:43.31:0,43,235	0/0:8,0:8:16.95:0,17,82	0/0:30,0:30:83.94:0,84,473	0/0:8,0:8:15.97:0,16,86	0/1:17,0:17:21.99:22,0,184	0/0:27,0:27:37.85:0,38,331	0/0:7,0:7:20.13:0,20,106	0/0:19,0:19:25.53:0,26,226	0/0:28,0:28:22.39:0,22,294	0/0:30,0:30:21.60:0,22,378	0/0:14,0:14:37.83:0,38,217
chr10	61572984	.	G	GCACA	1019.22	PASS	AB=1.000;AC=12;AF=0.214;AN=56;BaseQRankSum=0.186;DP=467;FS=1.491;HRun=0;HaplotypeScore=116.7500;InbreedingCoeff=0.7672;MQ=64.56;MQ0=9;MQRankSum=0.496;QD=9.99;ReadPosRankSum=-0.359;VQSLOD=2.8575;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:18.25:0,18,373	0/0:7,0:7:17.81:0,18,187	0/0:26,0:12:8.76:0,9,208	0/0:22,0:12:20.65:0,21,200	0/0:22,0:22:42.99:0,43,548	1/1:6,0:6:8.99:117,9,0	1/1:8,0:15:3.01:72,3,0	0/0:33,0:31:60.09:0,60,872	1/1:2,9:11:6.02:140,6,0	0/0:21,0:20:43.07:0,43,636	0/0:13,0:12:18.76:0,19,190	0/0:18,0:18:35.94:0,36,484	0/0:14,0:14:24.74:0,25,343	0/0:15,0:15:42.12:0,42,553	0/0:16,0:15:11.12:0,11,415	0/0:18,0:18:26.85:0,27,409	0/0:17,0:17:42.14:0,42,558	0/0:6,0:6:12.03:0,12,167	0/0:20,0:19:38.91:0,39,508	0/0:26,0:26:61.84:0,62,816	0/0:5,0:5:6.02:0,6,71	1/1:18,0:16:27.08:420,27,0	1/1:18,1:19:27.07:424,27,0	0/1:17,0:16:0:0,0,0	0/1:16,0:16:1.75:2,0,381	0/0:22,0:22:27.18:0,27,636	0/0:18,0:18:51.11:0,51,618	0/0:5,0:5:15.05:0,15,223
chr10	61572999	.	C	CACACAGAGAGAGAGAGAGA	5305.21	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=9.410;DP=522;FS=23.572;HRun=0;HaplotypeScore=278.3561;InbreedingCoeff=-0.4934;MQ=52.90;MQ0=11;MQRankSum=-6.564;QD=11.38;ReadPosRankSum=-2.822;VQSLOD=1.7121;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:22:99:118,0,343	0/1:9,0:9:99:242,0,183	0/0:27,0:9:8.76:0,9,261	0/0:23,0:10:20.85:0,21,212	0/1:21,0:20:67.02:67,0,532	0/1:11,0:11:3.50:125,0,3	0/1:16,0:16:11.75:119,0,12	0/1:33,0:29:99:163,0,897	1/1:12,0:12:8.54:139,9,0	0/1:23,0:22:99:594,0,563	0/1:21,0:20:99:137,0,196	0/1:18,0:18:99:184,0,442	0/1:14,0:14:99:259,0,353	0/1:20,0:19:99:133,0,512	0/1:20,0:19:94.21:94,0,439	0/1:16,0:16:94.38:94,0,388	0/1:19,0:19:86.96:87,0,613	0/0:6,0:6:12.04:0,12,209	0/1:19,0:18:99:103,0,510	0/1:29,0:28:18.27:18,0,767	0/1:7,0:7:2.29:2,0,62	1/1:21,0:18:32.10:466,32,0	1/1:19,0:19:29.35:423,29,0	1/1:2,2:17:0.29:2,0,0	0/1:17,0:17:81.03:81,0,382	0/1:23,0:23:99:669,0,628	0/1:29,0:29:99:596,0,598	0/1:10,0:10:99:389,0,229
chr10	61575733	.	CT	C	2067.87	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=9.797;DP=565;FS=0.456;HRun=7;HaplotypeScore=55.9951;InbreedingCoeff=0.8878;MQ=75.87;MQ0=0;MQRankSum=1.751;QD=20.89;ReadPosRankSum=3.170;VQSLOD=3.2785;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:90.29:0,90,1132	0/0:11,0:11:27.09:0,27,339	0/0:13,0:12:23.33:0,23,273	0/1:13,0:12:12.49:12,0,135	0/0:27,0:27:81.22:0,81,980	1/1:0,20:20:54.12:550,54,0	1/1:0,8:8:15.03:153,15,0	0/0:29,0:29:81.24:0,81,997	0/0:24,0:24:69.19:0,69,831	0/0:20,0:20:57.17:0,57,694	0/0:23,0:23:63.20:0,63,792	0/0:15,0:15:45.14:0,45,563	0/0:10,0:10:30.10:0,30,375	0/0:15,0:15:36.11:0,36,446	0/0:17,0:17:48.14:0,48,592	0/0:15,0:15:39.12:0,39,491	0/0:26,0:26:69.19:0,69,842	0/0:13,0:13:33.06:0,33,385	0/0:22,0:22:60.16:0,60,718	0/0:21,0:21:54.16:0,54,666	0/0:18,0:18:51.16:0,51,641	1/1:1,23:24:63.14:642,63,0	1/1:1,21:22:57.13:581,57,0	1/1:1,11:12:30.07:306,30,0	0/0:21,0:21:60.14:0,60,695	0/0:37,0:37:99:0,99,1224	0/0:33,0:33:84.25:0,84,1039	0/0:23,0:23:60.19:0,60,755
chr10	61576975	.	CA	C	3609.55	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=11.189;DP=602;FS=4.356;HRun=2;HaplotypeScore=59.3262;InbreedingCoeff=0.9995;MQ=77.48;MQ0=0;MQRankSum=-0.707;QD=32.52;ReadPosRankSum=2.552;VQSLOD=3.6958;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:75.25:0,75,1122	0/0:10,0:10:30.10:0,30,448	0/0:20,0:20:48.63:0,49,705	0/0:19,0:19:48.15:0,48,674	0/0:22,0:22:66.20:0,66,949	1/1:0,22:22:48.16:623,48,0	1/1:2,11:13:28.81:422,29,0	0/0:29,0:29:78.26:0,78,1167	0/0:25,0:25:75.25:0,75,1121	0/0:26,0:26:75.25:0,75,1109	0/0:30,0:30:84.28:0,84,1254	0/0:17,0:17:51.17:0,51,764	0/0:21,0:21:63.21:0,63,924	0/0:22,0:22:63.21:0,63,943	0/0:20,0:20:60.20:0,60,898	0/0:17,0:17:51.16:0,51,746	0/0:11,0:11:33.11:0,33,494	0/0:14,0:14:33.31:0,33,551	0/0:15,0:15:45.14:0,45,656	0/0:29,0:29:87.29:0,87,1304	0/0:20,0:20:60.20:0,60,899	1/1:1,30:31:81.26:1047,81,0	1/1:0,25:25:65.97:855,66,0	1/1:0,20:20:51.17:662,51,0	0/0:17,0:17:48.16:0,48,720	0/0:38,0:38:99:0,114,1701	0/0:33,0:33:96.33:0,96,1439	0/0:10,0:10:30.10:0,30,448
chr10	61577487	.	T	TG	339.31	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-2.882;DP=510;FS=0.000;HRun=7;HaplotypeScore=51.2542;InbreedingCoeff=0.9059;MQ=88.34;MQ0=0;MQRankSum=-2.037;QD=21.21;ReadPosRankSum=1.144;VQSLOD=2.9712;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:48:0,48,447	0/0:10,0:10:29.98:0,30,275	0/0:24,0:24:12.84:0,13,394	0/0:24,0:24:43.26:0,43,432	0/0:31,0:31:87.07:0,87,814	0/0:24,0:24:67.90:0,68,637	0/0:12,0:12:36.05:0,36,343	0/0:23,0:23:66.09:0,66,630	1/1:4,12:16:36.09:434,36,0	0/0:21,0:21:48.07:0,48,464	0/0:15,0:15:42.05:0,42,400	0/0:10,0:10:24.03:0,24,232	0/0:13,0:13:30.04:0,30,290	0/0:17,0:17:48.07:0,48,463	0/0:23,0:23:63.08:0,63,604	0/0:15,0:15:36.05:0,36,348	0/0:14,0:14:36.06:0,36,348	0/0:5,0:5:15.02:0,15,145	0/0:25,0:25:63.07:0,63,598	0/0:28,0:28:74.83:0,75,699	0/0:16,0:16:36.05:0,36,347	0/0:19,0:19:57.07:0,57,540	0/0:21,0:21:51.05:0,51,483	0/0:3,0:3:9.01:0,9,87	0/0:21,0:21:48.06:0,48,463	0/0:22,0:22:60.09:0,60,579	0/0:26,0:26:75.12:0,75,724	0/0:14,0:14:42.07:0,42,406
chr10	61580896	.	G	GA	115.50	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-0.164;DP=428;FS=3.217;HRun=9;HaplotypeScore=46.5802;InbreedingCoeff=0.7858;MQ=57.17;MQ0=10;MQRankSum=1.770;QD=12.83;ReadPosRankSum=-0.040;VQSLOD=2.8022;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:46.73:0,47,386	0/0:12,0:12:32.99:0,33,286	0/0:34,0:7:18.82:0,19,150	0/0:20,0:11:20.87:0,21,168	0/0:23,0:23:56.59:0,57,494	0/0:9,0:8:24:0,24,208	0/0:8,0:8:20.99:0,21,182	0/0:19,0:17:41.98:0,42,364	1/1:2,7:8:20.42:207,20,0	0/0:21,1:22:18.81:0,19,385	0/0:22,0:23:65.02:0,65,552	0/0:5,0:5:8.99:0,9,78	0/0:17,0:16:44.99:0,45,390	0/0:9,0:9:26.99:0,27,234	0/0:16,0:16:29.99:0,30,260	0/0:16,0:16:41.97:0,42,364	0/0:16,0:16:38.98:0,39,337	0/0:13,0:13:38.87:0,39,327	0/0:13,0:11:29.98:0,30,260	0/0:16,0:15:32.98:0,33,286	0/0:1,0:1:3:0,3,26	0/0:14,0:14:32.96:0,33,279	0/0:19,0:19:53.99:0,54,469	0/0:8,0:8:24:0,24,208	0/0:19,0:19:56.99:0,57,494	0/0:20,0:20:47.94:0,48,410	0/0:16,0:15:35.94:0,36,304	0/0:12,0:11:32.99:0,33,286
chr10	61581799	.	TC	T	63.31	PASS	AC=2;AF=0.037;AN=54;BaseQRankSum=9.944;DP=295;FS=6.204;HRun=1;HaplotypeScore=86.1660;InbreedingCoeff=0.3627;MQ=44.34;MQ0=3;MQRankSum=-8.741;QD=5.76;ReadPosRankSum=9.602;VQSLOD=-0.0167;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:24.08:0,24,303	0/0:7,0:6:6.96:0,7,84	0/0:10,0:6:15.05:0,15,207	0/0:10,0:4:9.03:0,9,133	0/0:14,0:14:42.09:0,42,514	0/0:11,0:11:24.42:0,24,166	0/0:4,0:4:4.66:0,5,85	0/0:17,0:16:37.39:0,37,453	1/1:1,10:11:30.88:156,31,0	0/0:17,0:16:8.37:0,8,144	0/0:6,0:6:10.05:0,10,118	0/0:11,0:11:5.99:0,6,64	0/0:10,0:10:8.58:0,9,149	0/0:1,0:1:2.99:0,3,23	0/0:12,0:12:11.25:0,11,130	0/0:6,0:6:8.26:0,8,81	0/0:14,0:14:12.42:0,12,114	0/0:7,0:7:17.40:0,17,196	0/0:11,0:10:19.30:0,19,242	0/0:18,0:16:19.68:0,20,269	./.	0/0:11,0:10:3.13:0,3,57	0/0:20,0:20:9.22:0,9,183	0/0:4,0:4:2.30:0,2,23	0/0:11,0:11:7.92:0,8,131	0/0:17,0:16:38.52:0,39,509	0/0:16,0:15:13.50:0,14,189	0/0:6,0:5:12.02:0,12,135
chr10	61581811	.	TC	T	2612.50	PASS	AB=0.681;AC=38;AF=0.679;AN=56;BaseQRankSum=5.766;DP=278;FS=0.000;HRun=1;HaplotypeScore=71.9735;InbreedingCoeff=0.0705;MQ=36.62;MQ0=11;MQRankSum=-1.194;QD=10.58;ReadPosRankSum=4.371;VQSLOD=1.6252;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,9:11:25.21:214,25,0	0/1:5,3:7:43.28:64,0,43	0/0:9,0:3:6.02:0,6,84	0/0:8,0:2:5.91:0,6,61	1/1:3,10:13:35.41:295,35,0	0/1:7,1:8:1.96:43,0,2	1/1:1,2:3:8.91:66,9,0	0/1:14,4:17:37.57:38,0,211	0/0:11,0:11:10.03:0,10,39	0/1:7,11:17:41.39:210,0,41	0/1:4,4:8:4.01:64,0,4	0/1:3,8:11:26.85:58,0,27	1/1:1,6:7:14.39:96,14,0	1/1:1,0:1:3:25,3,0	1/1:6,6:11:14.56:115,15,0	1/1:4,1:5:2.18:41,2,0	1/1:8,5:13:22.35:158,22,0	1/1:1,4:5:14.89:117,15,0	1/1:2,3:8:6:141,6,0	0/1:8,7:12:10.96:118,0,11	0/0:3,0:2:2.96:0,3,19	1/1:3,4:10:11.82:77,12,0	0/1:8,14:22:9.93:168,0,10	0/1:1,2:4:9.90:40,0,10	0/1:5,6:10:19.15:93,0,19	1/1:8,7:13:30.35:245,30,0	1/1:4,9:12:29.73:219,30,0	1/1:0,5:4:8.96:72,9,0
chr10	61581813	.	TTTC	T	3809.27	PASS	AB=0.738;AC=40;AF=0.714;AN=56;BaseQRankSum=8.374;DP=286;FS=2.184;HRun=0;HaplotypeScore=76.1775;InbreedingCoeff=-0.0115;MQ=35.21;MQ0=14;MQRankSum=-1.701;QD=14.27;ReadPosRankSum=5.672;VQSLOD=3.1485;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:12:22.32:338,22,0	0/1:5,3:7:31.33:88,0,31	0/0:8,0:2:3.01:0,3,40	0/0:8,0:2:3.01:0,3,67	1/1:16,0:15:36.11:528,36,0	1/1:8,1:9:7.04:56,7,0	1/1:1,2:3:4.92:53,5,0	0/1:14,4:17:53.08:53,0,176	0/1:11,0:11:1.01:31,0,1	0/1:7,11:17:31.38:266,0,31	0/1:7,3:9:2.57:61,0,3	0/1:7,3:10:19.11:85,0,19	1/1:2,5:7:15.01:137,15,0	1/1:2,0:2:3:25,3,0	1/1:6,6:11:17.72:152,18,0	1/1:4,1:5:5.29:52,5,0	1/1:9,5:14:19:147,19,0	1/1:4,1:5:15.04:209,15,0	1/1:7,3:8:0.98:98,1,0	0/1:9,7:13:0.44:164,0,0	0/0:3,0:2:2.88:0,3,15	1/1:7,4:10:12.01:110,12,0	0/1:11,11:22:18.29:261,0,18	0/1:2,2:4:5.99:43,0,6	0/1:5,6:10:18.65:141,0,19	1/1:14,1:13:27.08:400,27,0	1/1:2,9:10:24.02:222,24,0	1/1:6,0:4:8.96:90,9,0
chr10	61581814	.	TTC	T	2708.25	PASS	AB=1.000;AC=38;AF=0.679;AN=56;BaseQRankSum=8.667;DP=283;FS=3.457;HRun=0;HaplotypeScore=74.1653;InbreedingCoeff=-0.0693;MQ=34.95;MQ0=14;MQRankSum=-2.090;QD=10.18;ReadPosRankSum=5.214;VQSLOD=3.0403;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,9:12:22.28:215,22,0	0/1:8,0:7:38.80:76,0,39	0/0:7,0:1:3.01:0,3,40	0/0:7,0:2:3.01:0,3,54	1/1:7,10:16:38.73:336,39,0	0/1:9,0:9:1.30:42,0,1	1/1:3,0:3:4.92:45,5,0	0/1:18,0:17:40.65:41,0,196	0/1:11,0:11:7.46:7,0,8	0/1:17,0:16:43.20:217,0,43	0/1:10,0:9:5.55:48,0,6	0/1:10,0:10:24.32:69,0,24	1/1:6,1:7:14.94:116,15,0	1/1:2,0:2:3:25,3,0	1/1:12,0:11:14.76:123,15,0	1/1:5,0:5:2.28:44,2,0	1/1:13,0:13:18.50:125,19,0	1/1:2,3:5:14.93:130,15,0	0/1:10,0:8:1.41:85,0,1	0/1:16,0:13:9.17:133,0,9	0/0:3,0:2:2.92:0,3,17	1/1:11,0:10:11.95:93,12,0	0/1:21,0:21:28.06:211,0,28	0/1:5,0:5:5.44:51,0,5	0/1:11,0:10:23.72:116,0,24	1/1:9,6:13:27.47:250,27,0	1/1:11,0:10:23.92:188,24,0	1/1:2,4:4:8.96:75,9,0
chr10	61581815	.	TC	T	2478.03	PASS	AB=1.000;AC=43;AF=0.768;AN=56;BaseQRankSum=8.392;DP=277;FS=4.783;HRun=1;HaplotypeScore=68.9741;InbreedingCoeff=0.1269;MQ=34.36;MQ0=14;MQRankSum=-1.217;QD=9.49;ReadPosRankSum=4.478;VQSLOD=1.5384;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:12:22.22:187,22,0	0/1:8,0:7:11.56:61,0,12	0/0:7,0:1:2.99:0,3,23	0/0:6,0:1:3.01:0,3,43	1/1:18,0:17:38.72:304,39,0	0/1:9,0:9:0.47:60,0,0	1/1:3,0:3:5.88:36,6,0	0/1:17,0:16:38.43:38,0,100	1/1:2,8:10:19.10:84,19,0	0/1:17,0:16:6.66:171,0,7	1/1:10,0:9:9.46:88,9,0	0/1:10,0:10:5.33:53,0,5	1/1:6,0:6:14.71:90,15,0	1/1:2,0:2:3:25,3,0	1/1:10,0:9:13.96:107,14,0	1/1:5,0:5:1.51:38,2,0	1/1:14,0:13:19.60:134,20,0	1/1:5,0:5:14.87:112,15,0	1/1:10,0:8:7.40:77,7,0	0/1:15,0:12:1.72:110,0,2	0/0:3,0:2:2.37:0,2,8	1/1:11,0:10:11.77:72,12,0	1/1:21,0:21:11.45:175,11,0	1/1:5,0:5:3.58:60,4,0	0/1:11,0:10:4.23:85,0,4	1/1:14,0:12:26.84:211,27,0	1/1:11,0:10:23.65:160,24,0	1/1:6,0:4:8.96:71,9,0
chr10	61582626	.	AT	A	304.98	PASS	AB=0.500;AC=13;AF=0.813;AN=16;BaseQRankSum=3.022;DP=51;FS=2.567;HRun=3;HaplotypeScore=27.5753;MQ=42.65;MQ0=1;MQRankSum=-0.553;QD=8.24;ReadPosRankSum=3.022;VQSLOD=1.1377;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	./.	1/1:0,4:4:11.93:87,12,0	./.	./.	1/1:0,4:1:2.99:24,3,0	./.	0/0:0,1:1:2.97:0,3,20	./.	1/1:0,1:1:2.98:22,3,0	1/1:0,4:4:8.99:77,9,0	./.	./.	./.	./.	./.	./.	./.	0/1:0,8:6:41.97:49,0,42	./.	./.	./.	1/1:4,2:3:2.98:22,3,0	1/1:0,10:6:14.91:109,15,0	./.
chr10	61582666	.	AG	A	310.33	PASS	AC=24;AF=1.000;AN=24;DP=39;FS=0.000;HRun=1;HaplotypeScore=22.1754;InbreedingCoeff=-0.1568;MQ=22.75;MQ0=1;QD=9.70;VQSLOD=0.9027;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,3:2:5.99:48,6,0	./.	./.	./.	./.	1/1:0,2:1:2.99:24,3,0	./.	./.	1/1:0,2:1:2.99:24,3,0	1/1:0,2:1:3:25,3,0	./.	1/1:0,3:3:8.98:72,9,0	1/1:0,6:4:5.99:49,6,0	1/1:0,2:1:2.99:24,3,0	1/1:0,2:1:2.99:24,3,0	1/1:0,2:1:2.99:24,3,0	1/1:0,3:3:2.99:24,3,0	./.	./.	./.	./.	./.	./.	1/1:0,3:2:3:25,3,0	./.	1/1:0,2:1:2.97:20,3,0	./.	./.
chr10	61584624	.	CT	C	1373.97	PASS	AB=0.761;AC=10;AF=0.217;AN=46;BaseQRankSum=-7.428;DP=350;FS=0.000;HRun=13;HaplotypeScore=43.7967;InbreedingCoeff=0.1051;MQ=61.43;MQ0=42;MQRankSum=-0.905;QD=5.75;ReadPosRankSum=0.706;VQSLOD=1.1931;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:1,0:4:2.84:0,3,14	0/0:2,0:5:8.52:0,9,43	0/1:23,0:12:3.07:3,0,54	0/1:18,0:15:0.05:0,0,14	0/0:6,0:5:8.52:0,9,43	0/1:7,10:9:11.08:69,0,11	0/1:6,10:14:16.60:126,0,17	1/1:29,19:40:31.29:348,31,0	0/0:0,0:4:5.68:0,6,28	0/0:5,0:6:2.84:0,3,14	0/0:1,0:1:2.84:0,3,14	0/0:3,0:2:2.80:0,3,13	./.	0/0:4,0:1:0.47:0,0,1	./.	./.	./.	0/0:3,0:5:14.20:0,14,71	0/0:3,0:5:2.68:0,3,14	0/0:1,0:6:5.68:0,6,29	0/0:3,0:3:2.84:0,3,14	0/1:8,17:25:46.49:282,0,46	0/1:7,20:30:99:311,0,104	1/1:17,21:34:25.52:360,26,0	0/0:1,0:5:11.36:0,11,57	0/0:3,0:3:1.22:0,1,4	./.	0/0:5,0:1:2.84:0,3,14
chr10	61594847	.	CT	C	109.54	PASS	AB=0.563;AC=3;AF=0.071;AN=42;BaseQRankSum=2.402;DP=120;FS=2.185;HRun=8;HaplotypeScore=13.2047;InbreedingCoeff=0.1184;MQ=66.51;MQ0=4;MQRankSum=-1.245;QD=10.95;ReadPosRankSum=-1.308;VQSLOD=-0.0547;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:8:18.05:0,18,215	./.	0/0:7,0:4:6.01:0,6,64	0/0:7,0:2:1.86:0,2,34	0/0:5,0:5:9.03:0,9,108	0/0:3,0:3:6.02:0,6,72	./.	0/1:2,7:9:12.18:178,0,12	1/1:1,0:1:2.90:16,3,0	0/0:6,0:5:12.04:0,12,143	./.	0/0:5,0:5:3.01:0,3,36	0/0:2,0:2:3.01:0,3,35	0/0:2,0:2:5.79:0,6,37	./.	0/0:3,0:3:6.02:0,6,71	0/0:14,0:12:33.10:0,33,398	0/0:3,0:3:6.02:0,6,71	0/0:8,0:7:18.05:0,18,215	0/0:5,0:5:8.98:0,9,90	./.	./.	./.	0/0:1,0:1:3.01:0,3,36	0/0:10,0:10:21.06:0,21,252	0/0:4,0:4:9.03:0,9,109	0/0:3,0:3:3.01:0,3,35	0/0:9,0:9:27.08:0,27,326
chr10	61599168	.	T	TC	1085.83	PASS	AB=1.000;AC=23;AF=0.958;AN=24;BaseQRankSum=-1.733;DP=224;FS=0.000;HRun=1;HaplotypeScore=9.5492;InbreedingCoeff=-0.1497;MQ=26.44;MQ0=160;MQRankSum=-1.600;QD=10.65;ReadPosRankSum=1.200;VQSLOD=1.2383;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/1:48,0:2:22.60:23,0,28	./.	1/1:2,3:3:6.02:95,6,0	1/1:4,1:1:3.01:48,3,0	./.	./.	./.	1/1:2,1:1:3.01:48,3,0	1/1:2,3:4:9.03:143,9,0	./.	./.	1/1:1,1:1:3.01:47,3,0	./.	./.	./.	./.	./.	./.	./.	1/1:0,3:3:9.03:142,9,0	1/1:5,3:2:6.02:96,6,0	./.	1/1:4,2:2:6.02:96,6,0	1/1:5,4:4:9.03:144,9,0	1/1:0,4:4:12.04:191,12,0	1/1:2,2:2:6.02:96,6,0
chr10	61611665	.	G	GTC	403.70	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-2.847;DP=543;FS=1.255;HRun=0;HaplotypeScore=54.1267;InbreedingCoeff=0.8733;MQ=52.45;MQ0=58;MQRankSum=-0.767;QD=28.84;ReadPosRankSum=2.234;VQSLOD=4.6804;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:33:45.14:0,45,566	0/0:5,0:5:12.04:0,12,151	0/0:45,0:11:23.99:0,24,281	0/0:36,0:8:24.08:0,24,302	0/0:15,0:14:33.11:0,33,416	0/0:17,0:15:30.09:0,30,378	0/0:17,0:16:27.08:0,27,340	0/0:19,0:15:36.11:0,36,454	1/1:3,10:13:30.10:498,30,0	0/0:22,0:19:57.18:0,57,719	0/0:19,0:17:42.13:0,42,529	0/0:13,0:12:30.10:0,30,379	0/0:14,0:14:26.94:0,27,328	0/0:17,0:16:42.13:0,42,530	0/0:9,0:9:18.06:0,18,227	0/0:6,0:6:9.03:0,9,114	0/0:28,0:29:56.99:0,57,676	0/0:12,0:12:12:0,12,133	0/0:20,0:16:39.12:0,39,489	0/0:8,0:8:21.07:0,21,264	0/0:28,0:28:57.18:0,57,719	0/0:20,0:18:48.14:0,48,588	0/0:11,0:10:21.07:0,21,265	0/0:27,0:26:48.15:0,48,606	0/0:15,0:15:39.12:0,39,488	0/0:21,0:19:54.17:0,54,671	0/0:29,0:25:41.92:0,42,530	0/0:15,0:13:39.12:0,39,492
chr10	61613252	.	CA	C	5245.92	PASS	AB=0.994;AC=49;AF=0.875;AN=56;BaseQRankSum=9.797;DP=557;FS=1.308;HRun=1;HaplotypeScore=314.8955;InbreedingCoeff=-0.1231;MQ=68.68;MQ0=0;MQRankSum=-7.227;QD=9.42;ReadPosRankSum=10.152;VQSLOD=1.7088;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:47,0:47:36.76:425,37,0	1/1:7,0:7:17.42:97,17,0	0/1:11,0:11:10.42:10,0,26	0/1:20,1:21:21.05:84,0,21	1/1:20,0:20:17.94:133,18,0	1/1:19,0:18:1.62:206,2,0	1/1:24,1:25:17.91:296,18,0	0/1:14,0:10:5.57:77,0,6	1/1:32,0:32:36.72:413,37,0	1/1:19,0:19:21.54:214,22,0	1/1:12,0:12:23.19:135,23,0	1/1:21,1:22:28.91:255,29,0	1/1:25,0:25:16.24:281,16,0	1/1:16,0:16:28.63:230,29,0	1/1:24,0:24:42.27:350,42,0	0/1:12,0:12:19.03:106,0,19	1/1:18,0:18:3.57:119,4,0	1/1:20,0:20:28.85:218,29,0	1/1:20,0:16:35.39:203,35,0	1/1:13,1:14:13.26:70,13,0	0/1:25,0:25:0.38:93,0,0	1/1:19,1:20:29.46:182,29,0	1/1:18,0:18:10.88:75,11,0	0/1:22,0:22:13.74:130,0,14	1/1:17,0:17:13.73:173,14,0	0/1:15,0:15:11.55:135,0,12	1/1:29,0:29:66.78:365,67,0	1/1:13,0:13:12.72:168,13,0
chr10	61614553	.	T	TA	2477.43	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-9.614;DP=441;FS=2.199;HRun=7;HaplotypeScore=39.1887;InbreedingCoeff=0.9304;MQ=80.23;MQ0=0;MQRankSum=-3.966;QD=29.49;ReadPosRankSum=-0.307;VQSLOD=3.7312;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:18.02:0,18,174	0/0:11,0:11:30.02:0,30,282	0/0:10,0:10:27.02:0,27,252	0/0:12,0:12:17.13:0,17,165	0/0:34,0:34:90.13:0,90,864	1/1:1,21:22:57.17:689,57,0	1/1:0,3:3:3.01:36,3,0	0/0:12,0:12:33.04:0,33,312	0/0:11,0:11:27.04:0,27,261	0/0:24,0:24:66.09:0,66,633	0/0:31,0:31:81.13:0,81,782	0/0:13,0:13:33.05:0,33,319	0/0:14,0:14:33.04:0,33,318	0/0:14,0:14:39.06:0,39,377	0/0:11,0:11:30.05:0,30,290	0/0:6,0:6:18.03:0,18,174	0/0:20,0:20:54.08:0,54,521	0/0:5,0:5:9.01:0,9,87	0/0:14,0:14:39.04:0,39,368	0/0:30,0:30:84.13:0,84,811	0/0:5,0:5:15.02:0,15,145	1/1:1,26:27:75.23:906,75,0	1/1:2,24:26:69.21:833,69,0	1/1:0,6:6:15.05:179,15,0	0/0:18,0:18:45.07:0,45,435	0/0:24,0:24:66.10:0,66,637	0/0:15,0:15:39.06:0,39,377	0/0:13,0:13:30.05:0,30,290
chr10	61614723	.	TAC	T	424.39	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.661;DP=599;FS=1.083;HRun=0;HaplotypeScore=69.5631;InbreedingCoeff=0.9894;MQ=69.49;MQ0=2;MQRankSum=-1.964;QD=30.31;ReadPosRankSum=0.872;VQSLOD=4.9609;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:93.32:0,93,1582	0/0:8,0:8:21.06:0,21,337	0/0:26,0:19:34.93:0,35,621	0/0:27,0:24:60.08:0,60,908	0/0:23,0:23:63.22:0,63,1076	0/0:19,0:19:54.17:0,54,897	0/0:15,0:15:42.14:0,42,727	0/0:35,0:35:81.27:0,81,1371	1/1:0,14:14:39.13:519,39,0	0/0:31,0:31:87.30:0,87,1506	0/0:18,0:18:48.16:0,48,830	0/0:12,0:12:21.07:0,21,364	0/0:12,0:12:36.12:0,36,619	0/0:17,0:17:48.15:0,48,789	0/0:18,0:18:48.10:0,48,771	0/0:12,0:12:36.11:0,36,592	0/0:27,0:27:72.25:0,72,1226	0/0:10,0:10:27.09:0,27,467	0/0:19,0:19:45.13:0,45,720	0/0:44,0:43:99:0,120,2036	0/0:35,0:35:96.27:0,96,1559	0/0:17,0:17:48.15:0,48,804	0/0:18,0:18:48.16:0,48,831	0/0:9,0:9:27.05:0,27,411	0/0:23,0:23:63.22:0,63,1083	0/0:27,0:27:72.23:0,72,1204	0/0:29,0:28:81.23:0,81,1311	0/0:19,0:19:45.15:0,45,779
chr10	61615874	.	T	TA	18823.98	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=0.328;DP=617;FS=0.751;HRun=6;HaplotypeScore=107.5050;InbreedingCoeff=0.9914;MQ=74.71;MQ0=0;MQRankSum=-8.282;QD=32.29;ReadPosRankSum=5.194;VQSLOD=3.7722;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,23:28:72.17:873,72,0	1/1:1,13:14:39.12:490,39,0	0/0:20,0:20:46.89:0,47,453	0/0:14,0:14:30.06:0,30,302	1/1:2,39:41:99:1453,117,0	1/1:0,27:27:72.23:906,72,0	1/1:1,12:13:33.11:415,33,0	1/1:9,18:27:69.22:865,69,0	1/1:1,0:25:65.41:333,65,0	1/1:4,25:29:75.23:934,75,0	1/1:4,31:35:96.31:1207,96,0	1/1:1,17:18:51.16:641,51,0	1/1:1,17:18:51.16:640,51,0	1/1:2,12:14:36.07:434,36,0	1/1:1,10:11:27.09:340,27,0	1/1:1,9:10:30.08:364,30,0	1/1:5,22:26:66.08:776,66,0	1/1:1,8:9:24.08:302,24,0	1/1:4,14:18:42.13:526,42,0	1/1:4,39:43:99:1470,117,0	1/1:5,5:10:18.04:213,18,0	1/1:1,27:28:72.23:905,72,0	1/1:1,29:30:81.26:1019,81,0	1/1:1,14:15:42.13:528,42,0	1/1:3,24:27:72.19:887,72,0	1/1:3,19:22:57.18:717,57,0	1/1:1,35:36:99:1320,105,0	1/1:0,7:7:21.07:264,21,0
chr10	61615902	.	AG	A	15394.95	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=5.884;DP=633;FS=6.864;HRun=2;HaplotypeScore=119.9439;InbreedingCoeff=0.9938;MQ=78.83;MQ0=0;MQRankSum=-12.462;QD=34.29;ReadPosRankSum=1.026;VQSLOD=4.0640;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,37:38:84.27:1082,84,0	1/1:2,10:12:27.09:349,27,0	0/0:25,0:25:74.89:0,75,1013	0/0:19,0:19:51.15:0,51,732	1/1:3,37:40:99:1265,102,0	0/0:23,0:23:66.21:0,66,969	0/0:14,0:14:39.13:0,39,583	1/1:4,18:22:57.16:701,57,0	0/0:29,0:29:84.27:0,84,1239	1/1:0,28:28:81.26:1047,81,0	1/1:2,35:37:99:1398,111,0	1/1:1,16:17:42.14:544,42,0	1/1:0,17:17:48.16:620,48,0	1/1:0,16:16:39.13:504,39,0	1/1:0,9:9:27.09:349,27,0	1/1:1,8:9:27.07:335,27,0	1/1:3,27:30:69.09:851,69,0	1/1:2,6:8:24.06:288,24,0	1/1:2,19:21:57.17:726,57,0	1/1:4,34:38:99:1369,108,0	1/1:0,12:12:27.09:350,27,0	0/0:26,0:26:72.24:0,72,1078	0/0:29,0:29:87.28:0,87,1270	0/0:19,0:19:54.18:0,54,809	1/1:1,29:30:87.28:1125,87,0	1/1:0,27:27:81.24:1032,81,0	1/1:0,34:34:99:1320,102,0	1/1:1,3:4:12.01:139,12,0
chr10	61616586	.	TA	T	195	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.750;DP=561;FS=2.336;HRun=6;HaplotypeScore=54.2351;InbreedingCoeff=0.9083;MQ=73.76;MQ0=0;MQRankSum=-0.493;QD=17.73;ReadPosRankSum=-0.112;VQSLOD=3.2010;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:75.23:0,75,948	0/0:6,0:6:18.06:0,18,231	0/0:15,0:15:26.93:0,27,298	0/0:12,0:12:6.82:0,7,126	0/0:24,0:24:72.21:0,72,898	0/0:29,0:29:84.25:0,84,1052	0/0:15,0:15:45.13:0,45,565	0/0:21,0:21:60.12:0,60,696	1/1:1,10:11:27.07:289,27,0	0/0:32,0:32:96.28:0,96,1182	0/0:27,0:27:78.20:0,78,929	0/0:11,0:11:33.08:0,33,397	0/0:17,0:17:51.14:0,51,628	0/0:18,0:18:54.15:0,54,668	0/0:16,0:16:45.13:0,45,564	0/0:21,0:21:54.16:0,54,680	0/0:21,0:21:56.62:0,57,701	0/0:18,0:18:38.55:0,39,506	0/0:21,0:21:60.17:0,60,736	0/0:44,0:44:99:0,129,1593	0/0:12,0:12:36.11:0,36,450	0/0:20,0:20:51.13:0,51,616	0/0:20,0:20:54.08:0,54,660	0/0:12,0:12:36.11:0,36,450	0/0:20,0:20:57.16:0,57,698	0/0:29,0:29:84.25:0,84,1046	0/0:25,0:25:72.21:0,72,899	0/0:17,0:17:48.15:0,48,616
chr10	61620069	.	GC	G	2472.47	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=8.366;DP=524;FS=8.547;HRun=1;HaplotypeScore=53.5996;InbreedingCoeff=0.9742;MQ=73.37;MQ0=0;MQRankSum=0.131;QD=35.32;ReadPosRankSum=2.438;VQSLOD=3.3465;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:66.20:0,66,1025	0/0:14,0:14:42.14:0,42,671	0/0:25,0:25:72.24:0,72,1124	0/0:20,0:20:60.15:0,60,930	0/0:26,0:26:78.25:0,78,1224	1/1:0,25:25:63.21:881,63,0	1/1:0,9:9:24.08:336,24,0	0/0:32,0:32:96.29:0,96,1488	0/0:19,0:19:57.18:0,57,887	0/0:11,0:11:32.14:0,32,486	0/0:28,0:28:84.27:0,84,1318	0/0:14,0:14:42.14:0,42,671	0/0:22,0:22:66.19:0,66,1018	0/0:15,0:15:45.15:0,45,719	0/0:15,0:15:45.11:0,45,650	0/0:8,0:8:24.08:0,24,384	0/0:16,0:16:48.16:0,48,763	0/0:13,0:13:39.13:0,39,623	0/0:22,0:22:66.20:0,66,1010	0/0:31,0:31:93.32:0,93,1486	0/0:19,0:19:54.18:0,54,860	1/1:0,15:15:42.14:587,42,0	1/1:0,19:19:54.18:755,54,0	1/1:0,2:2:6.02:84,6,0	0/0:16,0:16:48.15:0,48,744	0/0:21,0:21:63.21:0,63,987	0/0:29,0:29:87.27:0,87,1341	0/0:16,0:16:48.16:0,48,764
chr10	61620324	.	TA	T	754.65	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.703;DP=505;FS=0.000;HRun=12;HaplotypeScore=50.9608;InbreedingCoeff=0.8704;MQ=62.96;MQ0=2;MQRankSum=-1.153;QD=14.80;ReadPosRankSum=-3.168;VQSLOD=2.9771;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:30.05:0,30,298	0/0:7,0:7:21.04:0,21,213	0/0:17,0:10:14.69:0,15,129	0/0:8,0:3:6.01:0,6,59	0/0:23,1:26:45.71:0,46,614	0/0:21,3:24:10.64:0,11,472	0/0:9,0:9:24.05:0,24,244	1/1:8,28:38:60.14:621,60,0	1/1:2,11:13:32.87:255,33,0	0/0:32,1:34:51.94:0,52,723	0/0:27,0:29:68.96:0,69,678	0/0:12,0:15:37.57:0,38,346	0/0:18,0:18:42.08:0,42,426	0/0:12,0:12:33:0,33,313	0/0:9,0:9:22.85:0,23,213	0/0:11,0:11:30.06:0,30,304	0/0:14,0:14:42.07:0,42,420	0/0:13,1:14:12.79:0,13,295	0/0:26,0:26:57.10:0,57,572	0/0:30,1:31:63.93:0,64,826	0/0:10,1:12:9.83:0,10,276	0/0:13,1:16:12.50:0,13,279	0/0:22,1:23:36.95:0,37,555	0/0:11,0:11:30.02:0,30,289	0/0:21,0:21:59.92:0,60,570	0/0:20,0:20:30.88:0,31,489	0/0:20,0:20:51.08:0,51,510	0/0:13,0:14:20.81:0,21,173
chr10	61620682	.	TG	T	611.71	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.904;DP=584;FS=0.000;HRun=3;HaplotypeScore=57.1527;InbreedingCoeff=0.9965;MQ=79.34;MQ0=0;MQRankSum=-2.734;QD=29.13;ReadPosRankSum=1.115;VQSLOD=2.8732;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:72.24:0,72,1030	0/0:9,0:9:27.08:0,27,370	0/0:19,0:19:53.61:0,54,725	0/0:23,0:23:57.16:0,57,743	0/0:24,0:24:72.24:0,72,1021	0/0:16,0:16:42.12:0,42,585	0/0:11,0:11:33.11:0,33,475	0/0:26,0:26:66.22:0,66,950	1/1:1,20:21:57.18:707,57,0	0/0:32,0:32:96.27:0,96,1327	0/0:31,0:31:93.30:0,93,1321	0/0:18,0:18:54.18:0,54,765	0/0:20,0:20:57.15:0,57,758	0/0:15,0:15:45.15:0,45,648	0/0:14,0:14:42.14:0,42,605	0/0:27,0:27:81.26:0,81,1143	0/0:20,0:20:57.13:0,57,776	0/0:8,0:8:24.08:0,24,344	0/0:22,0:22:63.17:0,63,865	0/0:26,0:26:78.26:0,78,1123	0/0:21,0:21:60.19:0,60,845	0/0:23,0:23:69.22:0,69,975	0/0:29,0:29:84.27:0,84,1185	0/0:18,0:18:51.17:0,51,734	0/0:19,0:19:54.18:0,54,777	0/0:27,0:27:78.25:0,78,1090	0/0:26,0:26:72.23:0,72,1006	0/0:12,0:12:36.12:0,36,516
chr10	61622188	.	TTTTA	T	1945.04	PASS	AB=0.632;AC=29;AF=0.967;AN=30;BaseQRankSum=2.350;DP=216;FS=6.295;HRun=0;HaplotypeScore=34.6689;InbreedingCoeff=-0.1623;MQ=60.89;MQ0=4;MQRankSum=-0.076;QD=12.47;ReadPosRankSum=-0.429;VQSLOD=1.6394;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,8:16:18.06:279,18,0	./.	./.	./.	1/1:4,1:5:3.01:47,3,0	1/1:6,0:9:2.99:23,3,0	./.	./.	1/1:5,0:8:9.01:84,9,0	./.	./.	1/1:1,2:3:3.01:47,3,0	1/1:3,1:4:3.01:47,3,0	./.	1/1:3,2:5:6.02:93,6,0	1/1:1,2:3:3.01:47,3,0	1/1:17,13:29:11.11:443,11,0	0/1:10,14:24:19.19:519,0,19	1/1:8,2:9:6.02:93,6,0	1/1:4,1:5:3.01:47,3,0	./.	./.	./.	./.	1/1:5,4:9:6.02:93,6,0	./.	1/1:4,3:7:9.03:140,9,0	1/1:17,0:18:3:28,3,0
chr10	61629273	.	T	TA	125.57	PASS	AB=0.786;AC=10;AF=0.192;AN=52;BaseQRankSum=-0.965;DP=263;FS=17.788;HRun=10;HaplotypeScore=39.3776;InbreedingCoeff=0.4664;MQ=52.08;MQ0=10;MQRankSum=-1.170;QD=5.02;ReadPosRankSum=-1.211;VQSLOD=-0.1685;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:18:18.76:0,19,109	0/1:3,0:3:12.84:13,0,18	./.	0/0:10,0:3:1.55:0,2,4	0/0:13,0:11:20.93:0,21,104	1/1:1,4:5:3.01:32,3,0	0/1:1,3:4:15.54:55,0,16	0/0:13,0:10:15.88:0,16,92	0/0:8,0:7:14.96:0,15,123	0/0:14,0:14:29.18:0,29,205	0/0:16,0:15:20.24:0,20,116	./.	0/0:12,0:11:19.68:0,20,111	0/0:8,0:8:13.63:0,14,67	0/0:4,0:2:2.96:0,3,19	0/0:4,0:4:11.74:0,12,71	0/0:13,0:13:30.82:0,31,185	0/0:15,0:14:18.97:0,19,105	0/0:11,0:7:1.91:0,2,109	0/0:11,0:11:11.45:0,11,118	0/0:5,0:4:5.85:0,6,35	1/1:1,2:2:6.02:64,6,0	1/1:1,3:3:3.01:32,3,0	1/1:0,6:4:6.02:64,6,0	0/0:10,0:10:25.20:0,25,151	0/0:13,0:11:20.48:0,20,141	0/0:10,0:9:10.75:0,11,52	0/0:15,0:14:35.72:0,36,193
chr10	61629284	.	G	GA	4144.48	PASS	AB=0.770;AC=37;AF=0.685;AN=54;BaseQRankSum=-5.974;DP=286;FS=19.677;HRun=10;HaplotypeScore=28.1361;InbreedingCoeff=0.5957;MQ=61.08;MQ0=9;MQRankSum=1.318;QD=18.34;ReadPosRankSum=1.735;VQSLOD=2.1687;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,14:17:21.52:224,22,0	1/1:0,4:4:12.03:126,12,0	0/0:17,0:5:14.65:0,15,107	0/0:14,0:5:6.33:0,6,49	1/1:3,10:12:23.04:280,23,0	0/0:3,0:3:2.96:0,3,19	0/0:4,0:4:10.05:0,10,58	1/1:2,14:14:34.70:319,35,0	0/0:7,0:8:14:0,14,103	1/1:0,16:16:47.32:478,47,0	1/1:5,11:16:2.42:228,2,0	./.	1/1:2,10:12:20.89:206,21,0	1/1:1,9:10:18:178,18,0	1/1:0,1:1:3.01:32,3,0	1/1:0,4:4:12.03:128,12,0	1/1:2,13:15:5.43:263,5,0	0/1:7,10:17:25.08:167,0,25	1/1:3,9:9:24.03:243,24,0	1/1:3,10:13:24.06:252,24,0	0/1:2,2:3:15.58:55,0,16	0/1:2,0:2:0.75:1,0,2	0/0:4,0:4:5.95:0,6,43	0/0:7,0:5:4.25:0,4,13	1/1:3,10:13:21.05:224,21,0	1/1:0,9:9:21.05:221,21,0	1/1:1,10:10:18.05:192,18,0	1/1:3,15:17:11.45:327,11,0
chr10	61629870	.	C	CA	449.86	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=-5.400;DP=456;FS=0.000;HRun=7;HaplotypeScore=43.7511;InbreedingCoeff=0.6441;MQ=60.13;MQ0=0;MQRankSum=2.443;QD=19.56;ReadPosRankSum=1.982;VQSLOD=2.8297;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:42.05:0,42,405	0/0:5,0:5:15.02:0,15,145	0/1:4,0:4:5.55:6,0,20	0/0:4,0:4:5.73:0,6,41	0/0:25,0:25:69.11:0,69,666	0/0:18,0:17:51.08:0,51,492	0/0:15,0:15:42.05:0,42,399	0/0:12,0:12:33.04:0,33,314	1/1:2,17:19:45.14:544,45,0	0/0:32,0:32:96.15:0,96,927	0/0:15,0:15:44.99:0,45,422	0/0:14,0:14:36.05:0,36,347	0/0:16,0:16:42.06:0,42,406	0/0:11,0:11:33.05:0,33,319	0/0:17,0:17:51.08:0,51,492	0/0:12,0:12:36.04:0,36,342	0/0:13,0:13:39.06:0,39,377	0/0:10,0:10:27.04:0,27,261	0/0:21,0:21:54.07:0,54,515	0/0:24,0:24:72.02:0,72,675	0/0:15,0:15:42.07:0,42,406	0/0:18,0:18:48.06:0,48,457	0/0:19,0:19:51.08:0,51,492	0/0:15,0:15:42.06:0,42,406	0/0:13,0:13:36.06:0,36,347	0/0:22,0:22:60.09:0,60,579	0/0:30,0:30:87.10:0,87,827	0/0:18,0:18:51.08:0,51,492
chr10	61634219	.	C	CT	271.53	PASS	AB=0.941;AC=3;AF=0.054;AN=56;BaseQRankSum=4.334;DP=492;FS=8.727;HRun=9;HaplotypeScore=50.0335;InbreedingCoeff=0.6800;MQ=57.02;MQ0=16;MQRankSum=1.205;QD=9.70;ReadPosRankSum=-1.294;VQSLOD=0.9983;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:31:74.97:0,75,651	0/0:9,0:9:17.99:0,18,156	0/0:12,0:10:20.99:0,21,182	0/0:11,0:10:20.98:0,21,182	0/0:18,0:18:50.99:0,51,443	0/0:14,0:12:35.99:0,36,313	0/0:13,0:12:23.97:0,24,204	0/0:17,0:17:41.95:0,42,359	1/1:1,11:12:33.09:365,33,0	0/0:29,0:28:59.95:0,60,517	0/0:8,0:9:17.03:0,17,136	0/0:13,0:12:26.99:0,27,234	0/0:13,0:11:29.99:0,30,260	0/0:14,0:14:32.96:0,33,280	0/0:13,0:13:26.99:0,27,234	0/0:14,0:13:26.97:0,27,234	0/0:21,0:21:47.98:0,48,417	0/0:23,0:22:56.98:0,57,495	0/0:25,0:24:59.98:0,60,518	0/0:21,2:22:50.97:0,51,443	0/0:13,0:13:26.99:0,27,234	0/0:19,0:18:47.99:0,48,417	0/0:23,0:23:56.95:0,57,490	0/0:24,0:24:50.99:0,51,443	0/1:15,1:14:6.19:6,0,182	0/0:23,0:22:59.98:0,60,521	0/0:17,0:17:41.98:0,42,365	0/0:21,0:20:56.99:0,57,495
chr10	61636020	.	AG	A	15511.32	PASS	AB=0.871;AC=54;AF=0.964;AN=56;BaseQRankSum=-4.493;DP=582;FS=7.193;HRun=3;HaplotypeScore=61.9296;InbreedingCoeff=-0.0404;MQ=64.89;MQ0=11;MQRankSum=-0.681;QD=26.65;ReadPosRankSum=2.578;VQSLOD=3.5792;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,47:49:99:1449,117,0	1/1:0,10:10:27.08:335,27,0	0/1:36,7:18:99:179,0,101	0/1:38,5:17:38.33:123,0,38	1/1:1,19:20:57.18:706,57,0	1/1:0,18:18:45.14:557,45,0	1/1:1,17:18:39.12:483,39,0	1/1:2,25:26:69.17:815,69,0	1/1:0,20:20:48.15:595,48,0	1/1:0,14:14:42.11:488,42,0	1/1:0,17:17:42:482,42,0	1/1:0,16:16:42.13:520,42,0	1/1:2,15:17:38.90:480,39,0	1/1:1,15:16:42.13:520,42,0	1/1:1,17:18:49.84:629,50,0	1/1:0,15:15:39.12:482,39,0	1/1:0,26:26:66.21:817,66,0	1/1:1,4:5:7.84:80,8,0	1/1:0,13:13:39.10:461,39,0	1/1:3,23:26:57.06:668,57,0	1/1:0,27:27:72.23:892,72,0	1/1:0,7:7:18.06:223,18,0	1/1:0,13:13:36.11:446,36,0	1/1:3,32:35:78.24:963,78,0	1/1:1,17:18:48.15:595,48,0	1/1:0,15:15:45.14:558,45,0	1/1:0,21:21:60.19:743,60,0	1/1:1,12:13:18.06:222,18,0
chr10	61636819	.	TTATATATATATATATA	T	4715.72	PASS	AC=36;AF=0.783;AN=46;BaseQRankSum=2.577;DP=180;FS=6.343;HRun=0;HaplotypeScore=71.0661;InbreedingCoeff=0.5026;MQ=66.81;MQ0=1;MQRankSum=-2.561;QD=37.73;ReadPosRankSum=2.935;VQSLOD=2.8362;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:3,5:8:6.02:248,6,0	1/1:0,2:2:6.02:267,6,0	0/0:11,0:7:0:0,0,0	0/0:13,0:6:9.39:0,9,182	1/1:2,6:8:20.70:548,21,0	0/0:4,0:4:6.02:0,6,95	0/0:1,0:1:3:0,3,25	0/0:21,0:20:24.08:0,24,691	1/1:0,5:5:15.05:668,15,0	1/1:4,5:9:13.79:322,14,0	1/1:4,3:7:3.01:74,3,0	1/1:1,4:5:6.02:250,6,0	1/1:2,1:4:6.02:245,6,0	1/1:1,1:2:3.01:134,3,0	1/1:0,5:5:6.02:267,6,0	1/1:1,4:5:6.02:250,6,0	1/1:3,5:8:3.01:134,3,0	1/1:4,4:8:3.01:134,3,0	1/1:8,6:14:23.17:330,23,0	./.	./.	./.	./.	./.	1/1:5,8:13:6.02:267,6,0	1/1:1,3:4:9.03:319,9,0	1/1:1,7:8:3.01:134,3,0	1/1:10,0:10:9.03:123,9,0
chr10	61640443	.	CA	C	586.72	PASS	AB=0.891;AC=5;AF=0.089;AN=56;BaseQRankSum=5.359;DP=493;FS=4.168;HRun=10;HaplotypeScore=51.6775;InbreedingCoeff=0.3991;MQ=74.50;MQ0=0;MQRankSum=-2.551;QD=7.72;ReadPosRankSum=-1.551;VQSLOD=1.1485;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:25:47.15:0,47,535	0/0:2,0:2:6.02:0,6,66	0/0:13,0:12:21.03:0,21,212	0/0:14,0:14:17.69:0,18,148	0/0:17,1:18:25.07:0,25,497	0/0:29,1:30:49.12:0,49,754	0/1:6,1:7:5:5,0,178	1/1:5,26:31:77.98:677,78,0	0/0:16,0:16:36.09:0,36,390	0/0:23,0:24:63:0,63,678	0/0:24,0:24:63.17:0,63,697	0/0:14,0:14:39.08:0,39,413	0/1:7,1:8:11.02:11,0,118	0/0:15,0:15:35.06:0,35,334	0/0:20,1:21:34.10:0,34,597	0/0:17,0:17:48.13:0,48,531	0/0:15,0:15:39.07:0,39,419	0/0:8,0:8:15.02:0,15,156	0/0:16,0:17:44.95:0,45,472	0/0:27,0:27:69.13:0,69,736	0/0:9,0:9:21.05:0,21,224	0/0:27,0:27:63.16:0,63,690	0/0:18,0:18:45.11:0,45,490	0/0:13,0:13:33.09:0,33,365	0/0:23,0:23:57.13:0,57,615	0/0:7,0:7:18.05:0,18,199	0/1:27,3:30:0.07:0,0,647	0/0:20,0:20:48.13:0,48,531
chr10	61649939	.	T	TA	224.31	PASS	AC=8;AF=0.148;AN=54;BaseQRankSum=-0.563;DP=479;FS=5.024;HRun=5;HaplotypeScore=35.6170;InbreedingCoeff=0.7474;MQ=36.18;MQ0=125;MQRankSum=0.822;QD=5.90;ReadPosRankSum=1.502;VQSLOD=-0.5774;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:18:39.08:0,39,411	0/0:5,0:3:9.02:0,9,97	0/0:8,0:1:2.50:0,2,9	0/0:16,0:3:6.01:0,6,59	0/0:24,0:16:42.10:0,42,450	1/1:1,12:6:12.04:158,12,0	./.	0/0:25,0:2:6.02:0,6,64	0/0:30,0:25:60.15:0,60,644	0/0:21,0:16:48.09:0,48,504	0/0:22,0:10:21.05:0,21,224	0/0:14,0:12:30.07:0,30,322	0/0:12,0:10:27.07:0,27,290	0/0:17,0:13:32.61:0,33,354	0/0:19,0:19:48.12:0,48,513	0/0:10,0:7:18.05:0,18,193	0/0:25,0:17:39.09:0,39,419	0/0:20,0:14:30.07:0,30,322	0/0:19,0:5:15.04:0,15,161	0/0:17,0:12:18.03:0,18,184	0/0:15,0:11:27.07:0,27,290	1/1:1,8:4:9.03:118,9,0	1/1:7,2:3:3.01:39,3,0	1/1:0,7:3:3.01:39,3,0	0/0:19,0:13:36.09:0,36,386	0/0:21,0:14:39.08:0,39,410	0/0:30,0:24:69.17:0,69,741	0/0:20,0:16:45.11:0,45,483
chr10	61652951	.	A	AT	4208.29	PASS	AB=0.741;AC=13;AF=0.232;AN=56;BaseQRankSum=-5.281;DP=949;FS=4.319;HRun=8;HaplotypeScore=100.4054;InbreedingCoeff=-0.3020;MQ=63.66;MQ0=0;MQRankSum=-2.393;QD=9.61;ReadPosRankSum=-0.617;VQSLOD=2.1338;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:21,18:39:99:397,0,325	0/0:19,0:19:51.03:0,51,466	0/1:12,1:12:19.69:20,0,82	0/1:16,2:17:28.16:28,0,256	0/1:40,24:64:99:596,0,737	0/1:24,10:34:99:262,0,405	0/1:14,11:25:99:314,0,229	0/1:29,24:53:99:698,0,400	0/0:34,0:34:90.02:0,90,817	0/0:46,0:46:99:0,126,1144	0/0:46,0:46:99:0,114,1038	0/0:30,0:30:74.96:0,75,670	0/0:25,0:25:65.95:0,66,585	0/0:23,0:23:56.96:0,57,508	0/0:28,0:28:71.97:0,72,645	0/0:28,0:28:81:0,81,730	0/0:36,0:36:80.97:0,81,729	0/1:8,7:15:99:166,0,178	0/0:40,0:40:99:0,99,906	0/0:47,0:47:99:0,135,1215	0/0:13,0:13:36:0,36,324	0/1:24,16:40:99:372,0,389	0/1:27,13:40:99:279,0,527	0/1:8,6:14:99:137,0,151	0/0:45,0:44:99:0,126,1145	0/1:27,19:46:99:528,0,453	0/0:51,0:51:99:0,141,1267	0/1:19,18:37:99:412,0,202
chr10	61654153	.	T	TTG	383.77	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=0.463;DP=632;FS=1.234;HRun=0;HaplotypeScore=78.3545;InbreedingCoeff=0.9226;MQ=53.61;MQ0=2;MQRankSum=-1.817;QD=23.99;ReadPosRankSum=1.550;VQSLOD=4.3670;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,132,1820	0/0:16,0:16:39.10:0,39,536	0/0:25,0:19:57.18:0,57,776	0/0:16,0:14:32.04:0,32,400	0/0:21,0:21:57.19:0,57,814	0/0:19,0:19:51.17:0,51,730	0/0:22,0:22:66.14:0,66,900	0/0:29,0:29:81.26:0,81,1141	1/1:4,12:14:27.09:478,27,0	0/0:23,0:23:69.23:0,69,974	0/0:22,0:22:63.21:0,63,886	0/0:19,0:19:57.18:0,57,799	0/0:11,0:11:13.12:0,13,409	0/0:21,0:21:63.21:0,63,900	0/0:28,0:28:72.11:0,72,960	0/0:23,0:22:63.18:0,63,880	0/0:29,0:29:75.22:0,75,1051	0/0:15,0:15:36.06:0,36,472	0/0:18,0:18:54.14:0,54,733	0/0:30,0:30:87.28:0,87,1229	0/0:23,0:23:69.20:0,69,938	0/0:22,0:22:60.16:0,60,820	0/0:18,0:18:54.14:0,54,733	0/0:35,0:35:99:0,102,1404	0/0:24,0:24:63.21:0,63,902	0/0:32,0:32:90.27:0,90,1235	0/0:25,0:25:75.17:0,75,1023	0/0:3,0:3:9.03:0,9,129
chr10	61657424	.	C	CCTT	1613.87	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-5.223;DP=564;FS=4.814;HRun=0;HaplotypeScore=70.6976;InbreedingCoeff=0.9922;MQ=62.15;MQ0=3;MQRankSum=-2.448;QD=39.36;ReadPosRankSum=-1.043;VQSLOD=3.8228;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:57.14:0,57,851	0/0:9,0:9:24.07:0,24,359	0/0:41,0:23:35.93:0,36,507	0/0:30,0:14:24.04:0,24,304	0/0:17,0:17:45.14:0,45,689	0/0:20,0:20:57.18:0,57,862	0/0:17,0:17:39.13:0,39,616	1/1:5,19:23:51.46:1087,51,0	1/1:0,17:17:30.10:648,30,0	0/0:25,0:25:69.21:0,69,1016	0/0:18,0:18:51.17:0,51,803	0/0:14,0:14:42.14:0,42,666	0/0:14,0:14:36.12:0,36,551	0/0:13,0:13:39.13:0,39,616	0/0:12,0:12:24.08:0,24,377	0/0:20,0:20:57.17:0,57,841	0/0:27,0:27:69.18:0,69,1027	0/0:18,0:18:45.11:0,45,685	0/0:23,0:23:57.16:0,57,841	0/0:15,0:15:36.09:0,36,524	0/0:17,0:17:48.13:0,48,709	0/0:28,0:28:81.24:0,81,1214	0/0:25,0:25:75.22:0,75,1119	0/0:25,0:25:72.23:0,72,1087	0/0:15,0:15:42.14:0,42,664	0/0:18,0:18:54.17:0,54,801	0/0:34,0:34:90.25:0,90,1325	0/0:6,0:6:18.06:0,18,285
chr10	61657753	.	A	ATGG	181.29	PASS	AB=0.795;AC=2;AF=0.036;AN=56;BaseQRankSum=6.595;DP=502;FS=36.604;HRun=0;HaplotypeScore=85.3457;InbreedingCoeff=-0.0398;MQ=76.39;MQ0=1;MQRankSum=-6.208;QD=6.25;ReadPosRankSum=0.159;VQSLOD=0.6187;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:66.23:0,66,1230	0/0:11,0:11:30.10:0,30,559	0/0:16,0:15:39.13:0,39,714	0/0:8,0:8:21.07:0,21,382	0/0:24,1:25:26.60:0,27,1197	0/0:25,0:25:75.26:0,75,1398	0/0:12,0:12:36.08:0,36,606	0/0:24,0:24:68.67:0,69,764	0/0:12,0:11:29.99:0,30,298	0/0:25,1:26:25.05:0,25,1335	0/0:21,3:24:14.60:0,15,1007	0/0:16,0:16:48.16:0,48,895	0/0:7,1:8:21.07:0,21,391	0/0:11,0:11:33.11:0,33,614	0/0:23,1:24:23.23:0,23,1176	0/1:7,4:11:99:169,0,358	0/0:23,0:23:66.23:0,66,1230	0/0:18,0:18:54.19:0,54,1007	0/0:27,0:27:78.27:0,78,1450	0/0:29,1:30:38.33:0,38,1516	0/0:8,0:8:21.07:0,21,392	0/0:16,0:16:48.16:0,48,895	0/0:21,2:23:17.62:0,18,1125	0/0:9,0:9:24.08:0,24,447	0/1:15,3:18:99:101,0,713	0/0:25,1:26:25.69:0,26,1345	0/0:23,1:24:16.56:0,17,1177	0/0:5,0:5:14.97:0,15,209
chr10	61657754	.	C	CTG	2117.68	PASS	AB=0.933;AC=7;AF=0.125;AN=56;BaseQRankSum=-3.690;DP=498;FS=21.708;HRun=0;HaplotypeScore=68.5140;InbreedingCoeff=0.5060;MQ=77.41;MQ0=1;MQRankSum=-3.130;QD=29.83;ReadPosRankSum=-3.051;VQSLOD=2.0033;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:66.22:0,66,1010	0/0:10,0:10:30.10:0,30,450	0/0:16,0:15:42.14:0,42,626	0/0:9,0:9:24.06:0,24,317	0/0:22,0:23:29.55:0,30,966	0/0:25,0:25:75.23:0,75,1105	0/0:11,0:11:33.11:0,33,503	1/1:0,26:26:78.25:1446,78,0	1/1:1,11:11:30.10:579,30,0	0/0:25,0:26:38.96:0,39,1042	0/0:20,0:23:20.51:0,21,810	0/0:16,0:16:48.16:0,48,735	0/0:7,0:8:20.96:0,21,291	0/0:11,0:11:33.10:0,33,484	0/0:22,0:23:30.19:0,30,969	0/1:7,0:11:99:122,0,288	0/0:23,0:23:69.22:0,69,1035	0/0:18,0:18:54.18:0,54,824	0/0:27,0:27:78.26:0,78,1191	0/0:29,0:30:48.25:0,48,1243	0/0:8,0:8:21.07:0,21,322	0/0:16,0:16:48.15:0,48,713	0/0:21,0:23:26.54:0,27,924	0/0:9,0:9:24.06:0,24,345	0/1:15,0:18:67.91:68,0,527	0/0:25,0:26:41.64:0,42,1112	0/0:23,0:24:35.50:0,35,993	0/1:3,1:4:45.64:46,0,124
chr10	61657809	.	AAGAG	A	297.76	PASS	AC=20;AF=0.455;AN=44;BaseQRankSum=2.280;DP=468;FS=26.074;HRun=0;HaplotypeScore=112.7702;InbreedingCoeff=0.5260;MQ=78.76;MQ0=9;MQRankSum=-0.919;QD=1.91;ReadPosRankSum=0.397;VQSLOD=0.5548;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:1.55:0,2,4	1/1:4,1:5:3.01:46,3,0	0/0:34,0:28:0.47:0,0,1	./.	./.	0/0:21,0:20:24.06:0,24,422	0/0:12,0:11:8.85:0,9,106	0/0:26,0:26:1.82:0,2,5	1/1:12,0:14:6.01:56,6,0	./.	1/1:21,0:22:5.79:54,6,0	0/0:12,0:12:2.99:0,3,24	0/0:8,0:8:2.98:0,3,22	./.	1/1:11,1:15:6.01:74,6,0	1/1:11,0:12:3:28,3,0	1/1:19,1:20:5.75:58,6,0	./.	0/0:19,0:19:0.89:0,1,2	1/1:24,0:24:3.01:43,3,0	./.	0/0:18,0:18:18.53:0,19,352	0/0:18,0:17:6.02:0,6,88	0/0:11,0:11:18.06:0,18,364	0/0:16,0:17:11.76:0,12,153	1/1:16,0:16:1.25:3,1,0	1/1:22,2:24:2.90:46,3,0	1/1:1,0:3:3:28,3,0
chr10	61658413	.	G	GGTGT	5620.39	PASS	AB=0.821;AC=48;AF=0.857;AN=56;BaseQRankSum=-2.849;DP=784;FS=4.250;HRun=0;HaplotypeScore=194.3617;InbreedingCoeff=-0.0110;MQ=56.49;MQ0=34;MQRankSum=0.687;QD=7.99;ReadPosRankSum=-0.231;VQSLOD=3.6772;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:38,3:42:29.99:348,30,0	0/1:6,0:10:19.53:149,0,20	0/1:76,0:22:8.76:9,0,37	0/0:81,0:32:4.81:0,5,154	1/1:14,1:23:6.01:98,6,0	1/1:20,0:16:6.84:73,7,0	1/1:22,1:21:12.06:107,12,0	1/1:38,0:36:37.10:270,37,0	1/1:25,0:26:16.89:150,17,0	1/1:30,1:28:13.48:531,13,0	1/1:20,0:21:15.03:210,15,0	1/1:11,0:23:8.24:110,8,0	1/1:4,1:9:2.87:53,3,0	1/1:21,0:21:29.08:333,29,0	0/1:14,5:19:17.52:157,0,18	1/1:13,8:17:8.22:93,8,0	1/1:27,16:38:45.54:775,46,0	0/1:11,1:10:51.79:75,0,52	1/1:14,6:19:16.94:250,17,0	0/1:16,11:29:33.64:110,0,34	0/1:35,0:35:23.61:280,0,24	1/1:22,0:20:7.17:127,7,0	1/1:13,0:17:2.02:38,2,0	1/1:22,0:31:7.06:99,7,0	1/1:6,3:10:1.89:52,2,0	1/1:26,0:24:47.59:507,48,0	1/1:9,4:14:24.08:420,24,0	1/1:11,0:16:15.02:196,15,0
chr10	61658432	.	GTC	G	2370.68	PASS	AB=0.863;AC=25;AF=0.446;AN=56;BaseQRankSum=5.167;DP=716;FS=0.000;HRun=0;HaplotypeScore=161.2223;InbreedingCoeff=-0.6477;MQ=47.57;MQ0=38;MQRankSum=-0.641;QD=3.90;ReadPosRankSum=1.622;VQSLOD=2.8990;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:44,5:45:97.17:97,0,284	0/1:10,1:11:12.33:12,0,78	0/1:46,0:7:9.80:10,0,16	0/0:51,0:11:5.35:0,5,174	0/0:20,5:23:11.15:0,11,93	0/1:12,3:11:87.24:87,0,102	0/1:21,4:23:99:131,0,131	1/1:33,1:32:58.94:458,59,0	0/1:26,0:26:59.62:60,0,200	0/1:23,7:25:99:229,0,304	0/1:18,8:26:17.84:18,0,205	0/0:19,0:19:6.76:0,7,106	0/0:11,1:9:17.31:0,17,128	0/1:14,4:17:74:74,0,200	0/1:23,4:25:65.32:65,0,74	0/1:18,5:18:48.75:80,0,49	0/1:30,11:31:27.39:332,0,27	0/1:13,2:12:38.97:39,0,99	0/1:20,1:15:58.17:99,0,58	0/1:17,8:24:36.97:37,0,69	0/1:37,6:38:99:104,0,320	0/1:21,5:25:63.83:64,0,351	0/1:17,2:18:83.16:83,0,136	0/1:25,6:29:99:118,0,180	0/1:5,2:7:16.17:42,0,16	0/1:21,5:24:99:186,0,362	0/1:11,4:15:99:101,0,112	0/1:9,0:9:0.06:0,0,146
chr10	61658440	.	GTC	G	1550.81	PASS	AB=0.900;AC=25;AF=0.446;AN=56;BaseQRankSum=9.888;DP=696;FS=0.000;HRun=0;HaplotypeScore=164.7002;InbreedingCoeff=-0.5079;MQ=46.26;MQ0=36;MQRankSum=-1.786;QD=2.66;ReadPosRankSum=0.054;VQSLOD=2.6186;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:45,5:46:20.91:21,0,676	0/1:12,1:13:3.58:4,0,310	1/1:23,0:3:2.29:6,2,0	0/0:40,0:13:14.17:0,14,197	0/0:24,4:27:29.24:0,29,425	0/1:17,0:13:63.24:63,0,202	0/1:27,1:26:99:119,0,424	1/1:27,0:25:36.97:273,37,0	0/1:26,0:26:15.31:15,0,409	0/1:21,6:23:99:131,0,563	0/1:19,7:26:14.37:14,0,397	0/0:18,0:18:20.90:0,21,280	0/0:11,1:9:21:0,21,346	0/1:15,4:18:31.07:31,0,388	0/1:25,4:27:58.23:58,0,220	0/1:21,3:19:36.59:37,0,191	0/1:29,11:30:99:313,0,186	0/0:11,2:11:11.73:0,12,260	0/1:22,1:15:56.62:57,0,321	0/1:15,8:22:36.84:37,0,158	0/1:41,5:40:45.93:46,0,828	0/1:27,0:26:57.67:58,0,676	0/1:18,0:17:71.06:71,0,261	0/1:35,0:32:99:112,0,377	0/1:7,2:9:38.84:39,0,71	0/1:25,3:26:99:112,0,806	0/1:11,4:15:92.54:93,0,365	0/1:9,0:9:0.91:1,0,300
chr10	61658466	.	C	CTG	193.77	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.619;DP=717;FS=2.721;HRun=0;HaplotypeScore=168.7944;InbreedingCoeff=0.6873;MQ=55.04;MQ0=24;MQRankSum=0.422;QD=13.84;ReadPosRankSum=-3.895;VQSLOD=3.0963;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:50:86.68:0,87,1143	0/0:16,0:16:38.89:0,39,470	0/0:29,1:16:27.02:0,27,418	0/0:37,0:30:62.13:0,62,723	0/0:29,0:28:51.17:0,51,676	0/0:22,0:18:29.94:0,30,383	0/0:31,0:28:60.01:0,60,792	1/1:6,8:13:1.18:269,1,0	0/0:35,0:34:31.10:0,31,614	0/0:25,0:21:57.13:0,57,717	0/0:27,0:27:45.13:0,45,581	0/0:16,0:16:23.99:0,24,296	0/0:14,0:13:32.91:0,33,379	0/0:24,0:24:51.15:0,51,644	0/0:33,0:32:30.10:0,30,395	0/0:21,0:19:27.09:0,27,358	0/0:36,0:29:44.61:0,45,470	0/0:13,0:11:27.09:0,27,353	0/0:22,0:18:48.07:0,48,588	0/0:22,0:21:26.95:0,27,298	0/0:53,0:49:96.06:0,96,1253	0/0:27,0:27:56.99:0,57,743	0/0:16,0:15:18.06:0,18,238	0/0:40,0:37:63.07:0,63,828	0/0:8,0:8:18.06:0,18,239	0/0:28,0:26:72.22:0,72,927	0/0:16,0:16:42.02:0,42,495	0/0:8,0:8:17.93:0,18,197
chr10	61660382	.	TC	T	1105.24	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.076;DP=589;FS=5.704;HRun=1;HaplotypeScore=52.2697;InbreedingCoeff=0.9679;MQ=62.32;MQ0=1;MQRankSum=-4.114;QD=33.49;ReadPosRankSum=-3.750;VQSLOD=1.9910;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:84.28:0,84,1190	0/0:8,0:8:24.06:0,24,324	0/0:15,0:13:36.12:0,36,515	0/0:5,0:4:12.04:0,12,171	0/0:34,0:34:99:0,99,1394	0/0:20,0:20:51.08:0,51,683	0/0:15,0:15:42.13:0,42,579	1/1:2,31:33:91.89:1200,92,0	0/0:21,0:21:60.20:0,60,856	0/0:27,0:27:81.26:0,81,1126	0/0:23,0:23:63.16:0,63,839	0/0:18,0:18:45.11:0,45,604	0/0:15,0:15:45.15:0,45,642	0/0:23,0:23:63.15:0,63,840	0/0:24,0:24:60.19:0,60,838	0/0:19,0:19:54.16:0,54,752	0/0:18,0:18:45.13:0,45,624	0/0:19,0:18:54.18:0,54,771	0/0:20,0:20:57.16:0,57,780	0/0:35,0:35:99:0,105,1397	0/0:13,0:13:39.13:0,39,557	0/0:20,0:20:51.16:0,51,728	0/0:31,0:31:87.27:0,87,1206	0/0:19,0:19:34.17:0,34,684	0/0:30,0:30:81.19:0,81,1050	0/0:19,0:19:57.15:0,57,760	0/0:20,0:20:54.01:0,54,718	0/0:15,0:15:45.15:0,45,642
chr10	61661365	.	T	TA	384.33	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=6.209;DP=471;FS=3.179;HRun=0;HaplotypeScore=53.7296;InbreedingCoeff=0.5511;MQ=66.77;MQ0=1;MQRankSum=2.536;QD=10.68;ReadPosRankSum=-0.220;VQSLOD=3.6399;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:81.25:0,81,1095	0/0:11,0:11:30.09:0,30,405	0/0:16,0:11:17.32:0,17,165	0/0:15,0:12:16.17:0,16,159	0/0:38,0:38:96.26:0,96,1267	0/0:23,0:22:69.22:0,69,947	0/0:4,0:4:9.02:0,9,111	0/1:22,0:22:17.03:17,0,246	1/1:0,14:14:39.12:472,39,0	0/0:25,0:25:72.22:0,72,967	0/0:14,0:14:42.14:0,42,582	0/0:10,0:10:30.10:0,30,418	0/0:16,0:16:42.12:0,42,567	0/0:13,0:13:39.10:0,39,509	0/0:12,0:12:33.11:0,33,460	0/0:19,0:19:54.16:0,54,734	0/0:24,0:24:72.23:0,72,986	0/0:16,0:16:45.15:0,45,619	0/0:15,0:15:45.13:0,45,597	0/0:23,0:23:66.21:0,66,901	0/0:5,0:5:12.04:0,12,167	0/0:2,0:2:6.02:0,6,84	0/0:10,0:10:30.05:0,30,353	0/0:4,0:4:12.04:0,12,167	0/0:34,0:34:93.30:0,93,1271	0/0:15,0:15:45.14:0,45,612	0/0:28,0:28:81.22:0,81,1077	0/0:16,0:16:48.16:0,48,668
chr10	61661366	.	T	TAA	1414	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-1.689;DP=477;FS=8.722;HRun=5;HaplotypeScore=61.2586;InbreedingCoeff=0.7473;MQ=66.73;MQ0=1;MQRankSum=0.736;QD=36.26;ReadPosRankSum=-2.889;VQSLOD=2.1881;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:75.22:0,75,940	0/0:11,0:11:30.10:0,30,382	0/0:17,0:12:1.49:0,1,232	0/0:15,0:12:1.39:0,1,167	0/0:38,0:38:90.27:0,90,1130	0/0:23,0:22:69.22:0,69,878	0/0:4,0:4:12.02:0,12,137	1/1:2,22:25:69.20:1089,69,0	1/1:14,0:14:39.11:446,39,0	0/0:25,0:25:72.21:0,72,894	0/0:15,0:15:39.12:0,39,497	0/0:10,0:10:27.08:0,27,344	0/0:17,0:17:42.11:0,42,521	0/0:13,0:13:39.12:0,39,496	0/0:12,0:12:33.08:0,33,394	0/0:19,0:19:54.16:0,54,674	0/0:24,0:24:66.17:0,66,809	0/0:16,0:16:39.09:0,39,479	0/0:14,0:14:39.12:0,39,497	0/0:25,0:25:69.19:0,69,861	0/0:5,0:5:15.03:0,15,177	0/0:2,0:2:6.02:0,6,76	0/0:10,0:10:30.10:0,30,379	0/0:4,0:4:12:0,12,135	0/0:34,0:34:96.29:0,96,1197	0/0:14,0:14:36.11:0,36,459	0/0:28,0:28:81.26:0,81,1029	0/0:16,0:16:45.05:0,45,510
chr10	61662756	.	C	CA	387.87	PASS	AB=0.822;AC=5;AF=0.089;AN=56;BaseQRankSum=-2.299;DP=514;FS=4.549;HRun=11;HaplotypeScore=62.3851;InbreedingCoeff=0.2116;MQ=76.66;MQ0=0;MQRankSum=-0.132;QD=6.93;ReadPosRankSum=-4.176;VQSLOD=1.0808;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:45:99:0,101,768	0/1:3,1:5:16.45:16,0,62	0/0:16,0:13:0.07:0,0,49	0/0:24,0:22:10.11:0,10,132	0/0:24,0:24:50.70:0,51,392	0/0:18,0:20:48.87:0,49,360	0/0:16,0:16:26.85:0,27,209	1/1:10,18:29:16.41:466,16,0	0/0:21,0:21:44.75:0,45,343	0/0:21,0:22:52.82:0,53,401	0/0:22,0:22:49.03:0,49,375	0/0:13,1:14:5.40:0,5,225	0/0:10,0:10:23.90:0,24,185	0/1:8,3:11:12.59:13,0,93	0/0:13,0:13:35.86:0,36,279	0/1:9,2:11:3.56:4,0,159	0/0:19,1:21:20.24:0,20,338	0/0:15,0:15:35.83:0,36,279	0/0:24,0:26:39.82:0,40,287	0/0:23,0:23:44.76:0,45,348	0/0:12,1:13:2.43:0,2,202	0/0:14,0:14:35.85:0,36,276	0/0:12,0:12:4.64:0,5,183	0/0:13,0:13:38.85:0,39,302	0/0:13,1:15:1.47:0,1,184	0/0:23,0:24:54.83:0,55,403	0/0:24,0:24:40.15:0,40,421	0/0:8,0:8:23.91:0,24,186
chr10	61663179	.	ATCAC	A	17181.21	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=14.558;DP=537;FS=0.712;HRun=0;HaplotypeScore=93.2266;InbreedingCoeff=0.9972;MQ=80.47;MQ0=3;MQRankSum=-5.144;QD=47.59;ReadPosRankSum=4.684;VQSLOD=5.2308;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,21:22:45.07:795,45,0	1/1:0,7:7:21.07:407,21,0	0/0:17,0:17:51.13:0,51,1249	0/0:13,0:13:36.12:0,36,900	1/1:0,25:24:63.17:1183,63,0	0/0:22,0:22:66.23:0,66,1797	0/0:18,0:18:54.19:0,54,1479	0/0:27,0:27:81.27:0,81,2134	0/0:18,0:18:54.19:0,54,1479	1/1:4,17:19:48.13:824,48,0	1/1:0,17:17:42.14:792,42,0	1/1:1,11:12:33.11:639,33,0	1/1:0,13:13:33.11:639,33,0	1/1:0,7:7:18.02:311,18,0	1/1:0,11:11:30.10:581,30,0	1/1:0,25:25:66.23:1279,66,0	1/1:3,35:37:84.24:1590,84,0	1/1:1,23:24:63.17:1182,63,0	1/1:1,16:17:48.16:930,48,0	1/1:1,26:26:63.17:1183,63,0	1/1:0,13:13:30.10:581,30,0	0/0:18,0:18:54.19:0,54,1417	0/0:24,0:24:69.24:0,69,1852	0/0:19,0:19:57.20:0,57,1561	1/1:0,20:20:57.11:1028,57,0	1/1:1,29:28:81.28:1554,81,0	1/1:0,23:23:66.17:1276,66,0	1/1:1,7:8:21.07:407,21,0
chr10	61665365	.	A	ACCG	2513.22	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-3.183;DP=567;FS=0.604;HRun=0;HaplotypeScore=80.9405;InbreedingCoeff=0.9988;MQ=88.13;MQ0=0;MQRankSum=-6.021;QD=53.47;ReadPosRankSum=-2.289;VQSLOD=5.2000;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,141,2371	0/0:9,0:9:27.09:0,27,460	0/0:19,0:19:51.17:0,51,863	0/0:22,0:22:63.22:0,63,1064	0/0:12,0:12:36.12:0,36,614	0/0:17,0:17:48.16:0,48,819	0/0:21,0:21:63.21:0,63,1056	1/1:13,10:23:60.19:1277,60,0	1/1:8,16:24:63.20:1358,63,0	0/0:26,0:26:75.26:0,75,1277	0/0:15,0:15:39.12:0,39,638	0/0:17,0:17:51.17:0,51,853	0/0:17,0:17:51.16:0,51,843	0/0:20,0:20:54.18:0,54,921	0/0:19,0:19:57.15:0,57,934	0/0:15,0:15:42.13:0,42,680	0/0:32,0:32:90.29:0,90,1509	0/0:15,0:15:45.13:0,45,738	0/0:16,0:16:42.13:0,42,691	0/0:14,0:14:42.14:0,42,716	0/0:46,0:46:99:0,129,2199	0/0:17,0:17:45.15:0,45,761	0/0:16,0:16:45.15:0,45,766	0/0:21,0:21:57.15:0,57,934	0/0:19,0:19:54.18:0,54,921	0/0:19,0:19:54.18:0,54,921	0/0:18,0:18:54.15:0,54,888	0/0:9,0:9:27.04:0,27,403
chr10	61665409	.	C	CCG	666.56	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=0.209;DP=477;FS=0.988;HRun=0;HaplotypeScore=63.9688;InbreedingCoeff=0.9634;MQ=82.79;MQ0=0;MQRankSum=-2.930;QD=33.33;ReadPosRankSum=-0.343;VQSLOD=5.2466;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:69.22:0,69,895	0/0:8,0:8:18.06:0,18,234	0/0:13,0:13:30.09:0,30,387	0/0:15,0:15:13.85:0,14,148	0/0:13,0:13:36.12:0,36,463	0/0:17,0:17:36.12:0,36,468	0/0:15,0:15:45.13:0,45,570	0/0:24,0:24:60.19:0,60,780	1/1:5,15:20:45.15:761,45,0	0/0:18,0:18:36.12:0,36,468	0/0:10,0:10:27.09:0,27,351	0/0:15,0:15:33.09:0,33,414	0/0:14,0:14:39.13:0,39,507	0/0:16,0:16:48.16:0,48,624	0/0:11,0:11:30.10:0,30,390	0/0:11,0:11:30.10:0,30,390	0/0:33,0:33:90.25:0,90,1138	0/0:15,0:15:39.13:0,39,507	0/0:24,0:24:57.17:0,57,715	0/0:13,0:13:30.08:0,30,376	0/0:43,0:43:99:0,117,1521	0/0:11,0:11:33.11:0,33,429	0/0:16,0:16:45.13:0,45,571	0/0:15,0:15:33.11:0,33,429	0/0:20,0:20:48.16:0,48,624	0/0:20,0:20:51.16:0,51,662	0/0:9,0:9:27.09:0,27,351	0/0:8,0:8:21.07:0,21,273
chr10	61665539	.	AAAAGAG	A	2893.03	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=9.463;DP=498;FS=15.969;HRun=0;HaplotypeScore=106.3927;InbreedingCoeff=0.9809;MQ=88.33;MQ0=0;MQRankSum=-10.750;QD=45.92;ReadPosRankSum=1.971;VQSLOD=2.7946;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:69.24:0,69,2449	0/0:6,0:6:18.06:0,18,641	0/0:34,0:34:96.31:0,96,2990	0/0:22,0:21:51.65:0,52,1719	0/0:22,0:22:66.23:0,66,2287	1/1:0,10:10:30.10:709,30,0	1/1:3,13:16:30.10:709,30,0	0/0:20,0:20:57.20:0,57,2003	0/0:14,0:14:39.13:0,39,1327	0/0:17,0:17:51.18:0,51,1819	0/0:15,0:15:42.14:0,42,1443	0/0:17,0:17:51.18:0,51,1808	0/0:19,0:19:57.20:0,57,2030	0/0:18,0:18:51.18:0,51,1807	0/0:12,0:12:36.12:0,36,1270	0/0:11,0:11:30.10:0,30,1070	0/0:32,0:32:96.33:0,96,3358	0/0:19,0:19:54.19:0,54,1894	0/0:23,0:23:63.20:0,63,2102	0/0:10,0:10:27.09:0,27,963	0/0:22,0:22:66.20:0,66,2156	1/1:1,16:17:45.11:1012,45,0	1/1:2,4:6:9.03:213,9,0	1/1:3,11:14:16.11:422,16,0	0/0:22,0:22:63.22:0,63,2201	0/0:25,0:24:69.24:0,69,2435	0/0:17,0:17:48.16:0,48,1687	0/0:15,0:15:45.15:0,45,1596
chr10	61667244	.	T	TAC	2132.78	PASS	AB=0.850;AC=22;AF=0.407;AN=54;BaseQRankSum=0.644;DP=494;FS=6.867;HRun=0;HaplotypeScore=79.9165;InbreedingCoeff=0.4174;MQ=65.85;MQ0=13;MQRankSum=-0.095;QD=8.27;ReadPosRankSum=-0.755;VQSLOD=2.0613;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:19,3:22:15.47:187,0,15	0/0:6,0:5:8.84:0,9,61	0/0:26,0:18:2.26:0,2,9	./.	0/1:14,11:26:15.45:208,0,15	0/1:25,2:26:99:167,0,107	1/1:10,11:22:12.04:182,12,0	1/1:20,0:20:10.14:68,10,0	1/1:17,0:17:18.02:233,18,0	0/0:19,0:19:26.31:0,26,279	0/0:25,0:25:41.95:0,42,449	0/0:23,0:23:39.07:0,39,415	0/1:10,1:11:24.83:25,0,179	0/0:11,0:11:12.03:0,12,134	0/0:12,0:15:32.93:0,33,349	1/1:9,2:8:3.01:43,3,0	0/0:15,0:16:29.73:0,30,286	1/1:6,0:8:12.01:117,12,0	0/0:11,0:11:11.70:0,12,95	0/0:13,0:13:24.05:0,24,259	0/0:22,0:21:23.89:0,24,249	0/1:12,4:14:15.47:189,0,15	0/1:15,2:16:18.45:166,0,18	1/1:23,2:24:1.57:273,2,0	0/0:9,0:8:8.84:0,9,72	1/1:19,2:21:20.27:237,20,0	0/0:21,0:21:30.09:0,30,335	1/1:7,0:12:24:225,24,0
chr10	61667294	.	A	AAGAG	1761.67	PASS	AB=0.909;AC=33;AF=0.660;AN=50;BaseQRankSum=-1.336;DP=494;FS=15.140;HRun=0;HaplotypeScore=121.8403;InbreedingCoeff=0.3347;MQ=47.37;MQ0=24;MQRankSum=-0.333;QD=4.87;ReadPosRankSum=-1.278;VQSLOD=1.5447;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:27,1:28:10.48:130,10,0	0/1:8,0:6:0:0,0,0	./.	./.	./.	0/1:21,1:21:40.58:197,0,41	1/1:23,0:22:3.89:51,4,0	1/1:22,0:22:0.94:2,1,0	0/0:10,0:13:5.89:0,6,56	1/1:21,0:21:18.65:230,19,0	1/1:19,0:19:9:86,9,0	1/1:23,0:22:13.85:164,14,0	1/1:13,0:12:1.67:10,2,0	0/0:17,0:16:11.99:0,12,146	1/1:18,0:18:2.22:7,2,0	0/1:17,0:14:20.82:53,0,21	1/1:14,3:17:16.28:245,16,0	0/0:13,0:11:2.94:0,3,47	1/1:18,0:18:15.36:162,15,0	1/1:17,0:15:2.64:25,3,0	0/0:20,0:19:0.41:0,0,1	0/1:15,0:14:4.68:5,0,12	1/1:17,2:18:11.39:187,11,0	0/1:13,4:17:37.60:132,0,38	1/1:8,2:10:5.93:88,6,0	0/0:15,0:15:7.51:0,8,102	1/1:25,0:26:2.45:136,2,0	0/0:10,0:10:11.95:0,12,138
chr10	61667367	.	AAGAGAG	A	852.18	PASS	AB=0.898;AC=9;AF=0.173;AN=52;BaseQRankSum=4.883;DP=415;FS=12.720;HRun=0;HaplotypeScore=108.4709;InbreedingCoeff=0.4089;MQ=64.14;MQ0=3;MQRankSum=-5.694;QD=8.12;ReadPosRankSum=-2.469;VQSLOD=1.1573;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:19:2.15:0,2,56	0/1:6,0:6:31.81:32,0,69	./.	0/0:25,0:16:0.47:0,0,1	0/0:14,0:14:8.16:0,8,90	0/1:16,7:23:14.93:112,0,15	1/1:15,15:31:24.08:418,24,0	0/0:21,0:20:12:0,12,231	0/0:13,0:17:23.99:0,24,354	0/0:15,0:15:18.06:0,18,414	0/0:11,0:11:15.05:0,15,394	0/0:22,0:22:17.84:0,18,473	0/0:4,0:4:9.03:0,9,202	0/0:9,0:9:12.04:0,12,354	0/0:12,0:12:21.03:0,21,475	0/0:12,0:12:8.98:0,9,206	0/0:7,0:7:18.02:0,18,493	0/0:2,0:4:1.76:0,2,42	0/0:14,0:13:21.07:0,21,515	0/0:16,0:16:11.87:0,12,312	0/0:17,0:17:12.04:0,12,294	1/1:7,10:17:18.06:338,18,0	./.	1/1:14,1:15:3.47:61,3,0	0/0:13,0:13:9.03:0,9,223	0/0:14,0:14:30.10:0,30,710	0/0:11,0:12:20.94:0,21,476	0/1:12,1:13:33.88:34,0,553
chr10	61668793	.	C	CTGTGTGTGTGTGTGTGTG	4789.92	PASS	AB=1.000;AC=44;AF=0.880;AN=50;BaseQRankSum=-2.629;DP=534;FS=0.000;HRun=0;HaplotypeScore=226.7509;InbreedingCoeff=0.3193;MQ=67.19;MQ0=29;MQRankSum=0.666;QD=11.17;ReadPosRankSum=3.376;VQSLOD=3.5242;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:28,4:30:6.02:256,6,0	./.	0/0:38,0:25:7.77:0,8,155	./.	1/1:29,0:26:5.07:72,5,0	1/1:17,0:16:3.71:23,4,0	1/1:21,0:20:13.29:221,13,0	1/1:31,0:28:28.72:648,29,0	0/0:16,0:14:0.28:0,0,0	1/1:24,0:24:19.72:221,20,0	1/1:13,0:12:3:25,3,0	1/1:11,0:11:9.69:292,10,0	1/1:13,0:12:12.49:396,12,0	1/1:20,0:19:3.01:96,3,0	1/1:13,0:12:0.13:1,0,0	1/1:18,0:18:4.23:325,4,0	1/1:15,0:11:9.50:335,10,0	1/1:19,0:16:15:451,15,0	1/1:15,0:15:17.89:474,18,0	1/1:12,0:11:2.99:24,3,0	0/1:25,0:22:23.69:42,0,24	1/1:19,0:17:8.56:207,9,0	0/1:9,0:9:0:0,0,0	1/1:15,5:22:0.47:1,0,0	./.	1/1:27,0:24:18.05:507,18,0	1/1:17,0:16:9.47:80,9,0	1/1:6,0:6:5.97:94,6,0
chr10	61668826	.	TGAGAGAGAGAGA	T	1676.92	PASS	AB=0.907;AC=28;AF=0.737;AN=38;BaseQRankSum=-1.048;DP=383;FS=2.460;HRun=0;HaplotypeScore=118.8075;InbreedingCoeff=-0.0192;MQ=34.35;MQ0=25;MQRankSum=0.339;QD=6.84;ReadPosRankSum=-1.815;VQSLOD=2.1955;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	0/0:16,0:14:0.47:0,0,1	0/1:15,0:14:16.90:57,0,17	0/0:16,0:16:2.09:0,2,7	./.	1/1:12,0:9:0.04:0,0,0	1/1:15,3:18:11.44:307,11,0	./.	1/1:15,0:15:0.47:1,0,0	1/1:14,0:15:9.31:206,9,0	1/1:14,1:13:3.01:95,3,0	1/1:10,0:9:6:127,6,0	1/1:8,0:8:3.48:74,3,0	1/1:16,0:13:2.79:20,3,0	0/1:16,0:14:43.21:43,0,100	0/1:12,0:13:11.52:89,0,12	0/1:9,1:11:0.01:0,0,0	./.	0/1:12,2:12:71.89:72,0,128	./.	1/1:17,0:16:3.01:65,3,0	./.	1/1:15,1:16:9.03:290,9,0	1/1:19,0:18:13.28:253,13,0	0/1:6,0:5:39.84:85,0,40
chr10	61670250	.	A	AACAT	1445.38	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-5.791;DP=1080;FS=6.516;HRun=0;HaplotypeScore=180.5740;InbreedingCoeff=0.9976;MQ=59.07;MQ0=3;MQRankSum=1.158;QD=28.91;ReadPosRankSum=1.954;VQSLOD=3.0069;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:37:44.66:0,45,955	0/0:18,0:18:45.15:0,45,737	0/0:37,0:27:36.12:0,36,571	0/0:31,0:21:33.10:0,33,497	0/0:25,0:25:57.19:0,57,909	0/0:32,0:32:72.25:0,72,1169	0/0:28,0:28:57.19:0,57,933	0/0:47,0:47:75.23:0,75,1140	1/1:10,40:50:63.22:1540,63,0	0/0:45,0:45:99:0,99,1596	0/0:27,0:27:72.19:0,72,1113	0/0:49,0:50:99:0,111,1805	0/0:46,0:46:99:0,111,1793	0/0:45,0:45:93.31:0,93,1491	0/0:67,0:66:99:0,135,2196	0/0:57,0:57:99:0,123,1947	0/0:34,0:33:60.16:0,60,941	0/0:22,0:22:46.64:0,47,695	0/0:27,0:27:63.21:0,63,1000	0/0:38,0:38:99:0,99,1596	0/0:72,0:73:99:0,149,2504	0/0:44,0:44:93.32:0,93,1517	0/0:37,0:36:78.20:0,78,1201	0/0:49,0:49:92.42:0,92,1488	0/0:26,0:26:66.18:0,66,1042	0/0:45,0:45:96.14:0,96,1570	0/0:33,0:33:72.15:0,72,1066	0/0:9,0:10:24.08:0,24,373
chr10	61670533	.	T	TAC	6172.57	PASS	AB=0.701;AC=25;AF=0.446;AN=56;BaseQRankSum=-10.197;DP=757;FS=2.161;HRun=0;HaplotypeScore=142.2341;InbreedingCoeff=0.1854;MQ=59.45;MQ0=13;MQRankSum=1.374;QD=13.51;ReadPosRankSum=-1.134;VQSLOD=4.6138;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:23,4:27:40.19:285,0,40	0/1:5,8:13:15.59:210,0,16	0/0:42,0:22:6.01:0,6,58	0/0:43,0:25:5.29:0,5,59	0/1:12,5:18:46.23:198,0,46	0/0:16,0:34:34.64:0,35,179	0/0:14,0:24:25.30:0,25,123	0/0:26,0:32:13.98:0,14,62	0/0:21,0:22:41.93:0,42,440	1/1:21,19:40:54.11:754,54,0	0/1:6,10:17:37.20:335,0,37	0/0:29,0:31:35.93:0,36,384	0/1:11,12:26:57.55:457,0,58	0/1:10,7:19:15.60:210,0,16	0/1:19,14:35:3.34:380,0,3	1/1:16,16:32:12.69:602,13,0	1/1:14,9:23:18.06:274,18,0	0/1:14,13:29:9.57:296,0,10	1/1:16,1:17:10.24:108,10,0	1/1:13,12:26:27.09:410,27,0	0/1:28,14:43:40.15:293,0,40	0/0:8,0:26:41.33:0,41,199	0/0:12,0:20:19.89:0,20,98	0/0:7,0:23:36.93:0,37,182	0/1:13,8:23:63.26:366,0,63	1/1:17,15:33:14.64:597,15,0	0/1:16,8:26:78.94:328,0,79	1/1:6,0:6:8.50:70,8,0
chr10	61670941	.	TACACACACACACAC	T	352.83	PASS	AB=1.000;AC=7;AF=0.140;AN=50;BaseQRankSum=-1.492;DP=635;FS=6.002;HRun=0;HaplotypeScore=229.1755;InbreedingCoeff=0.3364;MQ=57.79;MQ0=15;MQRankSum=0.125;QD=3.33;ReadPosRankSum=1.321;VQSLOD=1.5923;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:40:20.97:0,21,310	0/0:8,0:8:11.99:0,12,203	./.	./.	0/1:19,0:18:2.65:3,0,116	0/0:9,9:18:0:0,0,0	0/1:14,0:13:13.99:14,0,18	./.	1/1:10,0:22:3.01:98,3,0	0/0:25,0:24:50.92:0,51,1050	0/0:7,0:11:3.01:0,3,103	0/0:23,0:24:21.05:0,21,582	0/0:16,0:16:27.04:0,27,590	0/0:17,0:21:18.93:0,19,459	0/0:29,0:29:39.09:0,39,1229	0/0:13,0:21:8.90:0,9,132	0/0:28,0:35:59.79:0,60,1628	0/0:22,0:22:23.69:0,24,252	0/0:15,0:15:24.55:0,25,727	0/0:12,0:12:6:0,6,79	0/0:54,0:54:54.16:0,54,1387	0/1:18,0:17:68.42:122,0,68	0/0:7,12:19:5.39:0,5,40	1/1:31,0:33:8:232,8,0	0/0:15,0:15:9.01:0,9,157	0/0:15,0:15:22.76:0,23,478	0/0:22,0:22:24.02:0,24,378	0/0:10,0:11:9.03:0,9,143
chr10	61675507	.	A	AACACAC	7402.94	PASS	AB=0.745;AC=48;AF=0.923;AN=52;BaseQRankSum=-1.994;DP=686;FS=2.543;HRun=0;HaplotypeScore=171.7346;InbreedingCoeff=0.3153;MQ=69.19;MQ0=4;MQRankSum=-0.421;QD=12.06;ReadPosRankSum=-1.915;VQSLOD=3.6930;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:38,0:47:48.16:805,48,0	1/1:4,5:9:3.01:96,3,0	./.	./.	1/1:18,0:31:18.06:238,18,0	1/1:18,0:29:39:684,39,0	1/1:30,0:33:24.19:361,24,0	1/1:18,0:18:5.63:16,6,0	0/0:11,0:17:20.98:0,21,287	1/1:20,8:30:30.94:526,31,0	1/1:17,0:18:11.83:158,12,0	1/1:7,1:17:9.03:190,9,0	1/1:10,0:16:9:155,9,0	1/1:8,1:19:12.04:278,12,0	1/1:15,0:15:15.05:330,15,0	1/1:8,1:18:6.02:116,6,0	1/1:24,0:24:14.51:350,15,0	1/1:13,0:21:24.05:509,24,0	1/1:15,0:21:15.05:213,15,0	1/1:12,9:24:21.07:422,21,0	1/1:50,0:57:47.33:769,47,0	1/1:17,0:22:6.49:112,6,0	1/1:16,0:21:21.05:372,21,0	1/1:15,0:32:0.47:1,0,0	1/1:13,8:22:9.03:243,9,0	0/1:20,0:29:84.52:85,0,117	1/1:19,2:21:17.96:292,18,0	0/1:10,0:16:68.62:83,0,69
chr10	61676065	.	C	CT	11304.22	PASS	AB=0.789;AC=49;AF=0.875;AN=56;BaseQRankSum=-1.570;DP=550;FS=5.285;HRun=10;HaplotypeScore=95.6724;InbreedingCoeff=0.7580;MQ=74.46;MQ0=0;MQRankSum=-5.952;QD=22.88;ReadPosRankSum=1.104;VQSLOD=5.1149;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,17:24:16.88:589,17,0	1/1:2,7:9:21.05:224,21,0	0/0:16,0:16:9.37:0,9,176	0/0:17,0:15:22.47:0,22,166	1/1:4,18:22:29.95:509,30,0	1/1:3,9:12:24.06:252,24,0	1/1:5,19:25:23.48:455,23,0	0/0:23,0:23:59.91:0,60,492	1/1:5,9:14:27.07:288,27,0	1/1:10,9:19:11.44:324,11,0	1/1:5,18:23:66.12:684,66,0	1/1:9,11:21:38.92:391,39,0	1/1:4,11:15:36.07:373,36,0	1/1:6,11:17:42.08:427,42,0	1/1:6,14:20:42.10:442,42,0	1/1:5,8:13:5.40:252,5,0	1/1:10,13:23:45.02:447,45,0	1/1:7,11:18:29.42:490,29,0	1/1:10,19:30:50.38:714,50,0	1/1:9,11:21:17.25:361,17,0	0/1:11,4:15:6.61:134,0,7	1/1:8,18:26:22.89:646,23,0	1/1:6,15:21:4.84:456,5,0	1/1:7,15:21:48.12:510,48,0	1/1:1,30:33:92.90:955,93,0	1/1:4,18:22:60.15:636,60,0	1/1:5,15:20:51.12:536,51,0	1/1:4,5:9:21.03:210,21,0
chr10	61676102	.	ATT	A	7865.42	PASS	AB=0.585;AC=44;AF=0.786;AN=56;BaseQRankSum=-8.308;DP=523;FS=1.528;HRun=13;HaplotypeScore=111.0111;InbreedingCoeff=0.7778;MQ=67.38;MQ0=8;MQRankSum=-2.786;QD=18.00;ReadPosRankSum=1.524;VQSLOD=4.1664;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,24:30:56.95:596,57,0	1/1:0,6:6:18.03:174,18,0	0/0:21,0:11:15.04:0,15,169	0/0:15,0:11:15.04:0,15,162	1/1:7,18:27:53.45:489,53,0	0/0:12,0:12:30.09:0,30,416	0/0:18,0:19:29.58:0,30,386	1/1:7,19:26:57.05:553,57,0	1/1:3,0:13:30.10:130,30,0	1/1:5,16:21:30.11:463,30,0	1/1:5,22:27:60.05:575,60,0	1/1:6,11:17:38.99:374,39,0	1/1:3,10:13:26.95:262,27,0	1/1:3,12:16:35.76:329,36,0	1/1:1,9:11:23.78:215,24,0	1/1:2,10:12:30.04:291,30,0	1/1:5,18:23:50.73:477,51,0	1/1:4,10:15:20.94:253,21,0	1/1:8,15:24:38.89:428,39,0	1/1:2,15:19:38.69:410,39,0	1/1:1,11:13:22.09:255,22,0	0/1:4,3:22:39.24:39,0,85	0/0:5,0:19:35.28:0,35,121	0/1:9,2:21:16.54:17,0,126	1/1:6,19:26:62.74:584,63,0	1/1:5,14:20:35.98:399,36,0	1/1:5,15:22:35.74:378,36,0	1/1:2,6:8:18.02:175,18,0
chr10	61676677	.	CT	C	7749.26	PASS	AB=0.819;AC=53;AF=0.946;AN=56;BaseQRankSum=-4.812;DP=640;FS=3.673;HRun=12;HaplotypeScore=80.1332;InbreedingCoeff=0.1253;MQ=75.90;MQ0=2;MQRankSum=-1.313;QD=12.11;ReadPosRankSum=3.863;VQSLOD=5.0577;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,24:26:62.75:488,63,0	0/1:3,7:11:7.53:122,0,8	0/1:27,1:21:3.54:4,0,188	0/1:28,2:26:29.26:29,0,136	1/1:7,15:22:17.36:318,17,0	1/1:5,14:20:37.85:284,38,0	1/1:5,16:23:36.93:267,37,0	1/1:19,13:32:32.36:241,32,0	1/1:3,19:22:38.84:302,39,0	1/1:8,13:21:8.38:248,8,0	1/1:3,9:14:21.96:151,22,0	1/1:4,21:26:40.81:308,41,0	1/1:5,17:23:49.84:377,50,0	1/1:2,18:21:40.86:308,41,0	1/1:4,18:23:22.40:347,22,0	1/1:2,13:16:28.93:215,29,0	1/1:3,8:13:22.17:152,22,0	1/1:4,9:15:27.97:198,28,0	1/1:10,14:25:16.38:298,16,0	1/1:11,17:31:20.39:312,20,0	1/1:7,24:34:58.37:508,58,0	1/1:3,18:23:45.13:332,45,0	1/1:2,14:17:13.43:277,13,0	1/1:1,21:22:38.85:302,39,0	1/1:3,19:23:55.82:424,56,0	1/1:13,23:37:34.17:432,34,0	1/1:7,20:27:46.75:354,47,0	1/1:1,11:12:13.88:153,14,0
chr10	61676906	.	TAC	T	1231.07	PASS	AB=0.850;AC=38;AF=0.760;AN=50;BaseQRankSum=3.296;DP=560;FS=1.235;HRun=0;HaplotypeScore=70.3998;InbreedingCoeff=0.2488;MQ=71.10;MQ0=14;MQRankSum=1.123;QD=3.19;ReadPosRankSum=2.547;VQSLOD=1.8857;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:3.01:0,3,43	1/1:3,1:4:3.01:32,3,0	./.	./.	0/0:13,0:13:9.03:0,9,122	1/1:7,0:10:7.24:32,7,0	1/1:24,0:27:2.84:14,3,0	0/0:23,0:23:3.89:0,4,36	1/1:15,7:23:15.34:144,15,0	1/1:25,0:25:9:87,9,0	1/1:9,0:9:2.99:24,3,0	1/1:20,4:25:11.86:111,12,0	1/1:3,1:4:3.01:32,3,0	1/1:15,4:19:6.01:64,6,0	1/1:13,3:17:5.85:46,6,0	1/1:8,9:17:18.52:194,19,0	0/1:16,8:27:17.67:177,0,18	0/1:19,2:21:13.71:14,0,200	0/1:12,0:12:0:0,0,0	1/1:10,0:11:0.47:1,0,0	1/1:42,1:42:14.86:143,15,0	./.	0/0:7,0:10:0:0,0,0	1/1:25,0:31:3.31:14,3,0	0/1:10,3:14:32.98:55,0,33	1/1:15,4:19:8.99:88,9,0	1/1:11,0:15:11.36:56,11,0	1/1:6,4:9:3.01:32,3,0
chr10	61677984	.	CCACACACACA	C	216.60	PASS	AB=0.872;AC=10;AF=0.217;AN=46;BaseQRankSum=2.234;DP=402;FS=0.000;HRun=0;HaplotypeScore=102.3262;InbreedingCoeff=0.2211;MQ=60.49;MQ0=23;MQRankSum=-2.448;QD=2.19;ReadPosRankSum=-0.945;VQSLOD=1.0162;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:18:3.01:40,3,0	0/0:3,0:3:3.01:0,3,38	./.	./.	1/1:10,0:9:2.95:20,3,0	0/0:12,0:10:12.04:0,12,184	0/0:22,0:20:6.47:0,6,72	0/0:13,0:12:0.47:0,0,1	0/1:14,0:13:19.20:19,0,174	0/0:8,0:7:0:0,0,0	0/0:15,0:12:9.01:0,9,93	0/1:6,0:9:4.54:29,0,5	1/1:8,1:10:6.01:118,6,0	0/0:13,0:12:2.99:0,3,23	0/1:15,0:15:27.93:28,0,38	./.	0/0:16,0:20:17.97:0,18,342	0/1:15,5:19:0.26:82,0,0	0/0:15,0:14:1.82:0,2,5	0/0:8,0:7:3.01:0,3,48	0/0:21,0:19:0.18:0,0,52	0/0:11,0:10:9.03:0,9,111	0/0:11,0:10:9.03:0,9,143	0/0:23,0:24:15.05:0,15,212	0/0:15,0:14:3.01:0,3,38	./.	0/0:13,0:12:2.14:0,2,36	./.
chr10	61683693	.	G	GCACACACACACACA	12927.66	PASS	AB=0.686;AC=49;AF=0.875;AN=56;BaseQRankSum=-0.200;DP=831;FS=17.945;HRun=0;HaplotypeScore=280.2934;InbreedingCoeff=0.4624;MQ=58.04;MQ0=15;MQRankSum=0.752;QD=16.45;ReadPosRankSum=0.851;VQSLOD=2.2678;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:33,1:34:23.99:518,24,0	1/1:9,2:12:14.99:585,15,0	0/0:44,0:19:6.01:0,6,81	0/1:52,0:30:8.40:8,0,129	1/1:27,0:25:14.93:341,15,0	1/1:19,2:21:18.05:829,18,0	0/1:12,0:40:0.04:0,0,0	1/1:25,0:36:11.18:331,11,0	1/1:14,0:31:15.44:314,15,0	1/1:27,0:27:48.08:940,48,0	0/1:3,0:8:0:0,0,0	1/1:11,22:41:21.07:1147,21,0	1/1:27,2:30:48.04:1240,48,0	1/1:23,1:25:29.99:650,30,0	1/1:8,19:32:3.01:193,3,0	1/1:6,22:36:3.80:105,4,0	1/1:5,11:24:8.92:237,9,0	1/1:10,0:10:8.97:216,9,0	1/1:16,0:27:36.10:1114,36,0	1/1:22,3:27:17.40:502,17,0	1/1:43,0:42:38.95:488,39,0	1/1:9,0:33:12:279,12,0	0/1:6,0:21:0.07:0,0,1	1/1:42,0:45:44.63:770,45,0	0/1:16,8:36:0:0,0,0	1/1:22,0:22:56.42:1505,56,0	1/1:6,16:29:5.60:391,6,0	1/1:8,0:8:15:224,15,0
chr10	61683831	.	G	GCA	16641.68	PASS	AB=0.637;AC=31;AF=0.554;AN=56;BaseQRankSum=-12.328;DP=845;FS=11.304;HRun=0;HaplotypeScore=141.3316;InbreedingCoeff=-0.2250;MQ=53.83;MQ0=13;MQRankSum=4.055;QD=23.88;ReadPosRankSum=2.276;VQSLOD=5.6269;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:9,18:29:39.21:701,0,39	1/1:1,6:8:18.06:285,18,0	0/0:33,0:9:15.03:0,15,161	0/0:50,0:13:7.73:0,8,73	0/1:7,19:28:10.91:795,0,11	0/1:11,9:20:5.46:385,0,5	0/1:16,22:40:25.59:727,0,26	0/0:16,0:38:36.36:0,36,185	0/0:6,0:24:47.87:0,48,232	0/1:10,13:22:88.01:611,0,88	1/1:9,8:17:15.05:238,15,0	0/1:19,8:30:99:363,0,231	0/1:9,21:30:69.86:875,0,70	1/1:5,17:22:51.17:806,51,0	1/1:7,22:29:54.18:841,54,0	0/1:9,17:25:44.43:695,0,44	1/1:9,31:38:22.25:1282,22,0	0/1:11,16:27:49.15:650,0,49	0/1:15,5:18:14.45:264,0,14	1/1:11,19:31:51.17:808,51,0	0/1:33,57:87:42.94:1942,0,43	1/1:3,27:30:66.23:1046,66,0	0/1:5,13:18:35:439,0,35	0/1:19,32:56:44.46:1099,0,44	0/1:10,14:25:28.09:681,0,28	0/1:9,13:23:25.95:513,0,26	0/1:7,9:18:99:242,0,145	0/1:4,11:15:39.45:353,0,39
chr10	61684377	.	GA	G	1031.32	PASS	AB=0.955;AC=5;AF=0.089;AN=56;BaseQRankSum=0.292;DP=610;FS=1.977;HRun=8;HaplotypeScore=81.5653;InbreedingCoeff=0.8384;MQ=77.17;MQ0=0;MQRankSum=1.181;QD=16.63;ReadPosRankSum=-1.110;VQSLOD=3.6094;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,99,1173	0/0:17,0:17:45.11:0,45,529	0/1:19,1:17:0:0,0,213	0/0:13,0:13:6.20:0,6,125	0/0:29,0:29:78.24:0,78,942	0/0:15,0:15:36.11:0,36,435	0/0:23,0:23:66.20:0,66,797	1/1:1,20:21:60.08:573,60,0	1/1:0,20:20:60.10:579,60,0	0/0:21,0:21:60.18:0,60,715	0/0:14,0:14:36.11:0,36,435	0/0:11,0:11:33.09:0,33,388	0/0:19,0:19:51.16:0,51,616	0/0:23,0:23:57.17:0,57,688	0/0:21,0:21:54.15:0,54,631	0/0:22,0:22:63.19:0,63,761	0/0:36,0:36:90.28:0,90,1087	0/0:24,0:24:66.20:0,66,797	0/0:13,0:13:36.11:0,36,435	0/0:28,0:28:72.21:0,72,858	0/0:24,0:24:66.18:0,66,775	0/0:28,0:28:78.22:0,78,929	0/0:27,0:27:72.18:0,72,853	0/0:26,0:26:72.20:0,72,857	0/0:19,0:19:57.17:0,57,688	0/0:22,0:22:60.15:0,60,685	0/0:24,0:24:69.21:0,69,833	0/0:14,0:14:36.11:0,36,435
chr10	61686705	.	AG	A	241.62	PASS	AC=2;AF=0.037;AN=54;BaseQRankSum=5.107;DP=771;FS=7.507;HRun=1;HaplotypeScore=60.1813;InbreedingCoeff=0.8362;MQ=50.31;MQ0=58;MQRankSum=-4.856;QD=8.63;ReadPosRankSum=-0.978;VQSLOD=0.2928;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:69.22:0,69,1078	0/0:9,0:9:18.06:0,18,287	./.	0/0:26,0:3:3.01:0,3,32	0/0:20,0:16:39.13:0,39,623	0/0:27,0:24:54.18:0,54,863	0/0:27,0:25:54.18:0,54,859	0/0:35,0:19:57.05:0,57,786	1/1:1,27:18:24.08:335,24,0	0/0:40,0:39:99:0,105,1639	0/0:12,0:12:27.09:0,27,431	0/0:48,0:48:99:0,114,1822	0/0:30,0:30:75.26:0,75,1198	0/0:34,0:34:81.25:0,81,1245	0/0:34,0:33:81.28:0,81,1292	0/0:24,1:23:18.36:0,18,823	0/0:42,0:39:72.22:0,72,1116	0/0:27,0:26:60.19:0,60,935	0/0:28,0:20:60.19:0,60,931	0/0:19,0:19:45:0,45,716	0/0:34,0:31:60.17:0,60,911	0/0:25,0:24:63.21:0,63,1007	0/0:14,0:13:30.08:0,30,451	0/0:43,0:43:99:0,105,1676	0/0:27,0:27:72.23:0,72,1127	0/0:31,0:28:78.24:0,78,1183	0/0:23,0:23:51.17:0,51,807	0/0:16,0:15:45.13:0,45,692
chr10	61686718	.	CT	C	228.43	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.794;DP=773;FS=9.112;HRun=4;HaplotypeScore=62.9422;InbreedingCoeff=0.8581;MQ=52.14;MQ0=59;MQRankSum=-5.543;QD=7.88;ReadPosRankSum=-0.292;VQSLOD=-0.2739;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:81.24:0,81,1099	0/0:6,0:6:15.02:0,15,175	0/0:27,0:7:5.94:0,6,41	0/0:32,1:9:11.04:0,11,175	0/0:21,0:17:51.16:0,51,695	0/0:26,0:23:66.20:0,66,887	0/0:27,0:25:63.11:0,63,824	0/0:34,0:20:60.19:0,60,821	1/1:3,26:19:27.08:322,27,0	0/0:37,0:36:93.23:0,93,1237	0/0:9,0:9:24.04:0,24,285	0/0:47,0:47:99:0,135,1838	0/0:29,0:29:87.24:0,87,1177	0/0:35,0:35:99:0,99,1298	0/0:34,0:33:99:0,99,1321	0/0:22,1:22:30.36:0,30,830	0/0:41,0:38:81.23:0,81,1095	0/0:29,0:29:75.20:0,75,993	0/0:31,0:22:63.15:0,63,817	0/0:16,0:16:39.12:0,39,531	0/0:29,0:29:72.23:0,72,990	0/0:27,0:27:81.25:0,81,1095	0/0:11,0:10:30.10:0,30,418	0/0:42,0:42:92.53:0,93,1458	0/0:32,0:32:87.27:0,87,1197	0/0:27,0:25:69.22:0,69,944	0/0:20,0:20:54.18:0,54,754	0/0:20,0:19:54.18:0,54,756
chr10	61689212	.	TACACACACACACAC	T	3490.02	PASS	AB=0.745;AC=32;AF=0.615;AN=52;BaseQRankSum=2.583;DP=518;FS=1.853;HRun=0;HaplotypeScore=204.4959;InbreedingCoeff=0.4667;MQ=55.93;MQ0=11;MQRankSum=-3.415;QD=10.09;ReadPosRankSum=1.125;VQSLOD=2.1442;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:35:20.82:21,0,229	1/1:7,0:7:11.98:172,12,0	./.	./.	0/0:11,0:11:15.02:0,15,224	1/1:16,10:27:24.55:531,25,0	1/1:16,8:24:5.97:80,6,0	0/1:22,0:27:15.23:21,0,15	0/0:12,0:14:21.07:0,21,894	1/1:15,8:23:14.77:352,15,0	1/1:12,1:13:3.01:117,3,0	0/1:8,14:23:24.95:236,0,25	1/1:11,7:19:11.38:433,11,0	1/1:8,11:20:8.70:277,9,0	1/1:6,11:17:9.03:290,9,0	1/1:6,5:11:9.03:352,9,0	1/1:12,0:12:3.01:63,3,0	0/0:20,0:25:18.46:0,18,234	0/1:9,0:13:7.12:7,0,14	1/1:7,6:13:5.83:171,6,0	1/1:34,0:33:9.43:72,9,0	0/0:12,0:16:3.01:0,3,92	0/0:6,0:8:3.01:0,3,62	0/0:22,0:31:24.67:0,25,550	1/1:12,3:14:6.02:176,6,0	0/0:10,0:12:14.99:0,15,233	1/1:9,0:9:6.02:121,6,0	0/0:7,0:7:9:0,9,85
chr10	61691952	.	AGT	A	888.29	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=0.648;DP=541;FS=12.796;HRun=0;HaplotypeScore=123.6188;InbreedingCoeff=0.9467;MQ=55.67;MQ0=8;MQRankSum=-0.017;QD=14.80;ReadPosRankSum=1.203;VQSLOD=3.2359;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:34:52.56:0,53,547	0/0:7,0:7:8.82:0,9,108	0/0:17,0:7:11.98:0,12,134	0/0:17,0:9:24.05:0,24,292	0/0:29,0:29:53.84:0,54,627	0/0:16,0:15:35.88:0,36,477	0/0:14,0:14:20.82:0,21,199	0/0:35,0:35:82.52:0,83,1176	0/0:19,0:18:44.72:0,45,628	0/0:22,0:22:47.70:0,48,611	0/0:11,0:10:12.04:0,12,168	0/0:15,0:15:31.73:0,32,296	0/0:20,0:20:52.91:0,53,589	0/0:22,0:22:42.06:0,42,604	0/0:23,0:23:49.16:0,49,540	0/0:13,0:13:28.41:0,28,228	0/0:27,0:27:56.08:0,56,586	0/0:19,0:19:37.06:0,37,394	0/0:11,0:11:20.79:0,21,264	0/0:13,0:13:29.99:0,30,427	0/0:32,0:30:36.11:0,36,511	1/1:11,10:21:24.04:283,24,0	1/1:14,7:21:36.11:445,36,0	1/1:10,8:18:26.87:303,27,0	0/0:17,0:17:35.02:0,35,360	0/0:20,0:20:58.16:0,58,668	0/0:18,0:18:41.24:0,41,459	0/0:6,0:6:14.81:0,15,150
chr10	61691964	.	CGTGTGT	C	5129.69	PASS	AB=0.928;AC=43;AF=0.827;AN=52;BaseQRankSum=-1.617;DP=498;FS=11.192;HRun=0;HaplotypeScore=134.1615;InbreedingCoeff=0.2352;MQ=48.74;MQ0=15;MQRankSum=1.116;QD=12.24;ReadPosRankSum=3.777;VQSLOD=3.4095;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:36,0:33:30.01:586,30,0	1/1:5,0:5:3.01:61,3,0	./.	./.	1/1:20,3:23:17.94:292,18,0	1/1:16,0:16:12.03:176,12,0	1/1:11,1:12:5.56:121,6,0	0/0:28,0:28:5.95:0,6,42	0/0:19,0:20:24.89:0,25,615	0/1:24,0:23:0.22:167,0,0	1/1:6,1:6:1.55:4,2,0	1/1:14,0:15:14.84:265,15,0	1/1:21,1:23:24.43:373,24,0	1/1:20,0:21:11.97:210,12,0	1/1:20,0:20:23.98:444,24,0	1/1:10,0:11:21.07:387,21,0	1/1:23,2:26:0.58:388,1,0	0/1:13,0:13:4.14:306,0,4	1/1:7,0:8:5.92:80,6,0	1/1:10,0:10:3.01:60,3,0	0/1:31,1:29:0:0,0,0	1/1:16,0:17:3.01:41,3,0	1/1:17,0:18:3.01:41,3,0	0/1:14,0:18:49.17:110,0,49	1/1:14,0:15:17.80:353,18,0	0/1:22,0:22:11.01:278,0,11	1/1:12,2:15:18.06:327,18,0	1/1:4,0:4:3.01:61,3,0
chr10	61691992	.	TGTGTGTGTGTGTGA	T	952.47	PASS	AB=0.995;AC=19;AF=0.339;AN=56;BaseQRankSum=5.454;DP=415;FS=0.671;HRun=0;HaplotypeScore=155.3516;InbreedingCoeff=-0.1373;MQ=38.66;MQ0=24;MQRankSum=-3.444;QD=4.00;ReadPosRankSum=3.044;VQSLOD=2.6086;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:30:15.19:0,15,231	0/0:4,0:3:2.74:0,3,12	0/0:7,0:1:3.01:0,3,30	0/0:7,0:1:2.90:0,3,16	0/1:18,0:18:4.91:5,0,88	0/1:16,0:15:2.34:2,0,121	0/0:14,0:14:9.06:0,9,61	0/1:14,0:13:10.36:10,0,127	0/0:18,0:17:33.66:0,34,1277	0/0:19,0:17:4.25:0,4,373	1/1:8,0:7:2.79:24,3,0	0/1:12,0:12:84.24:84,0,87	0/1:14,0:14:90.56:91,0,116	0/0:12,0:12:15.24:0,15,145	0/1:17,0:16:62.48:89,0,62	0/1:14,0:14:76.84:77,0,94	0/1:26,0:25:4.28:4,0,260	0/1:12,0:11:90.21:90,0,178	0/1:12,0:11:0.81:1,0,79	0/0:8,0:8:7.97:0,8,129	0/0:26,0:22:8.81:0,9,146	1/1:17,2:19:6.02:137,6,0	1/1:12,4:16:5.65:128,6,0	0/1:15,1:16:80.93:297,0,81	0/1:11,0:10:8.79:9,0,55	0/0:23,0:20:10.88:0,11,307	0/1:13,0:13:53.10:53,0,151	0/0:3,0:3:5.79:0,6,38
chr10	61691998	.	TGTGTGTGAGAGA	T	6198.38	PASS	AB=1.000;AC=43;AF=0.768;AN=56;BaseQRankSum=-0.998;DP=371;FS=26.093;HRun=0;HaplotypeScore=110.7955;InbreedingCoeff=0.4531;MQ=42.16;MQ0=22;MQRankSum=3.072;QD=19.31;ReadPosRankSum=-0.795;VQSLOD=1.8379;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:31,2:27:30.10:587,30,0	1/1:4,0:3:3.01:61,3,0	0/0:6,0:1:3.01:0,3,89	0/0:8,0:4:5.90:0,6,101	1/1:13,0:13:18.04:292,18,0	1/1:11,2:12:14.12:238,14,0	1/1:15,0:15:5.86:146,6,0	0/0:13,0:12:14.84:0,15,102	0/0:16,0:16:21.48:0,21,776	1/1:17,0:15:11.25:262,11,0	0/0:7,0:6:0.47:0,0,1	1/1:10,1:12:14.50:334,14,0	1/1:10,1:12:23.96:485,24,0	1/1:12,0:12:11.77:209,12,0	1/1:15,2:16:24.08:564,24,0	1/1:15,1:16:21.07:450,21,0	1/1:22,1:22:4.90:454,5,0	1/1:9,1:9:3.80:467,4,0	1/1:8,0:7:7.95:126,8,0	1/1:7,0:7:3.01:60,3,0	0/1:22,0:19:0:0,0,0	0/1:16,0:16:25.30:62,0,25	1/1:14,0:14:2.97:51,3,0	0/1:14,0:14:99:103,0,109	1/1:11,0:10:17.88:353,18,0	1/1:19,1:17:19.27:437,19,0	1/1:8,1:9:20.81:396,21,0	1/1:2,0:2:3.01:61,3,0
chr10	61692004	.	TGAGAGA	T	840.79	PASS	AB=0.979;AC=30;AF=0.625;AN=48;BaseQRankSum=1.836;DP=358;FS=8.679;HRun=0;HaplotypeScore=101.1523;InbreedingCoeff=0.4176;MQ=43.77;MQ0=19;MQRankSum=-2.517;QD=3.70;ReadPosRankSum=1.567;VQSLOD=1.3347;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,3:25:0:0,0,0	./.	0/0:8,0:2:6.02:0,6,169	0/0:12,0:8:18.51:0,19,380	./.	1/1:11,1:11:8.58:93,9,0	1/1:14,0:14:2.56:24,3,0	0/0:13,0:12:0:0,0,0	0/0:16,0:16:14.33:0,14,215	1/1:12,1:13:5.56:89,6,0	0/0:6,1:6:0:0,0,0	1/1:12,0:12:5.75:49,6,0	1/1:11,0:11:4.62:93,5,0	0/0:8,0:8:0.47:0,0,1	1/1:17,0:15:8.99:102,9,0	1/1:16,3:19:5.81:46,6,0	1/1:22,0:21:7.49:56,7,0	1/1:12,0:11:9.02:144,9,0	1/1:7,0:7:7.61:57,8,0	0/1:6,0:6:0:0,0,0	./.	0/1:16,0:16:14.18:14,0,14	1/1:14,0:14:2.51:10,3,0	0/1:17,0:17:1.08:1,0,44	0/1:10,1:10:0:0,0,0	1/1:16,0:13:10.95:140,11,0	1/1:8,0:8:2.82:49,3,0	./.
chr10	61692015	.	GAGAGA	G	873.83	PASS	AB=0.984;AC=35;AF=0.648;AN=54;BaseQRankSum=3.168;DP=283;FS=0.756;HRun=0;HaplotypeScore=80.3929;InbreedingCoeff=0.1648;MQ=48.28;MQ0=14;MQRankSum=-4.037;QD=3.95;ReadPosRankSum=1.639;VQSLOD=1.6336;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:11:0.56:0,1,3	1/1:3,0:3:0.89:2,1,0	0/0:10,0:4:11.92:0,12,201	0/0:16,0:10:21.51:0,22,409	./.	1/1:8,2:10:9.90:96,10,0	0/1:15,1:16:2.30:20,0,2	1/1:5,0:5:0.61:27,1,0	0/1:15,0:15:27.50:27,0,178	1/1:2,1:4:5.73:82,6,0	0/0:5,0:6:0:0,0,0	1/1:11,0:11:8.93:77,9,0	0/1:11,0:11:0.88:66,0,1	1/1:8,0:8:1.69:19,2,0	0/1:16,1:15:3.02:70,0,3	1/1:16,0:16:10.09:64,10,0	1/1:15,1:16:11.76:73,12,0	1/1:8,0:8:4.23:134,4,0	0/1:6,0:6:6.54:49,0,7	1/1:1,0:2:0.47:1,0,0	0/0:12,0:10:1.57:0,2,5	0/1:21,0:21:22.04:24,0,22	1/1:14,0:15:2.44:10,2,0	0/1:18,0:18:21.22:21,0,36	1/1:4,0:3:5.70:31,6,0	1/1:9,2:8:5.77:70,6,0	1/1:3,0:3:2.83:49,3,0	0/0:2,0:2:5.98:0,6,45
chr10	61692017	.	GAGA	G	635.56	PASS	AB=0.965;AC=36;AF=0.667;AN=54;BaseQRankSum=3.542;DP=283;FS=2.578;HRun=0;HaplotypeScore=81.8981;InbreedingCoeff=0.1710;MQ=51.08;MQ0=13;MQRankSum=-2.665;QD=2.79;ReadPosRankSum=1.746;VQSLOD=1.3860;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:11:0.56:0,1,3	1/1:3,0:3:0.82:1,1,0	0/0:11,0:5:14.90:0,15,176	0/0:16,0:10:20.90:0,21,285	./.	1/1:10,0:10:7.93:59,8,0	0/1:17,0:17:2.30:20,0,2	1/1:5,0:4:1.73:29,2,0	0/1:16,0:16:38.71:39,0,74	1/1:5,0:5:3.46:59,3,0	1/1:8,1:9:2.51:10,3,0	1/1:12,0:12:6.89:62,7,0	0/1:11,1:12:1.06:39,0,1	1/1:8,0:8:1.69:19,2,0	0/1:15,0:14:3.29:34,0,3	1/1:16,0:16:10.12:57,10,0	1/1:16,0:16:6.55:38,7,0	1/1:8,0:8:5.30:87,5,0	0/1:6,0:6:6.88:35,0,7	0/1:3,1:4:1.21:1,0,2	0/0:12,0:10:1.57:0,2,4	0/1:17,0:17:4.78:28,0,5	1/1:12,0:12:5.35:23,5,0	0/1:18,0:18:2.70:27,0,3	1/1:4,0:3:5.70:31,6,0	1/1:11,1:9:7.28:41,7,0	1/1:3,0:3:3:31,3,0	0/0:2,0:2:3.37:0,3,9
chr10	61692029	.	G	GA	1989.36	PASS	AB=1.000;AC=49;AF=0.875;AN=56;BaseQRankSum=-1.048;DP=407;FS=11.152;HRun=0;HaplotypeScore=91.9939;InbreedingCoeff=0.3114;MQ=59.17;MQ0=7;MQRankSum=-4.438;QD=5.32;ReadPosRankSum=5.573;VQSLOD=2.4257;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:18:4.93:21,5,0	0/1:9,0:9:8.70:20,0,9	0/0:16,0:10:20.93:0,21,227	0/0:17,0:11:23.23:0,23,245	0/1:10,0:10:4.81:23,0,5	1/1:16,0:16:15.06:92,15,0	1/1:23,0:23:20.70:111,21,0	1/1:11,0:11:23.55:183,24,0	1/1:15,0:15:0.72:112,1,0	1/1:9,0:9:1.77:114,2,0	1/1:11,0:11:6.17:62,6,0	1/1:18,1:19:21.73:127,22,0	1/1:20,0:20:5.46:83,5,0	1/1:14,0:14:10.82:71,11,0	1/1:19,1:19:15.48:80,15,0	0/1:20,0:20:3.25:49,0,3	1/1:20,1:21:16.95:91,17,0	1/1:10,0:10:7.41:23,7,0	1/1:9,0:9:12.82:82,13,0	1/1:10,0:10:6.18:74,6,0	1/1:22,0:21:3.49:38,3,0	1/1:18,0:19:6.99:93,7,0	1/1:14,0:14:13.95:100,14,0	1/1:19,1:20:9.07:104,9,0	1/1:11,0:10:11.89:103,12,0	1/1:13,1:14:25.84:161,26,0	1/1:3,0:3:2.50:9,2,0	1/1:5,0:5:10.58:99,11,0
chr10	61692031	.	A	AGAGT	10614.45	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-3.788;DP=455;FS=6.819;HRun=0;HaplotypeScore=91.0113;InbreedingCoeff=0.7215;MQ=62.61;MQ0=4;MQRankSum=-6.126;QD=25.27;ReadPosRankSum=-0.803;VQSLOD=4.0006;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,14:20:9.03:194,9,0	1/1:1,8:10:5.98:163,6,0	0/0:17,0:12:29.28:0,29,377	0/0:17,0:12:26.63:0,27,395	1/1:1,8:11:2.90:65,3,0	1/1:0,15:15:18.06:455,18,0	1/1:4,20:26:33.09:679,33,0	1/1:3,8:12:30.02:650,30,0	1/1:2,11:17:27.09:694,27,0	1/1:3,5:11:24.06:457,24,0	1/1:1,7:12:9.03:223,9,0	1/1:2,15:20:33.04:660,33,0	1/1:4,19:25:23.68:474,24,0	1/1:2,11:15:11.99:188,12,0	1/1:5,15:23:21.39:419,21,0	1/1:5,14:21:18.06:460,18,0	1/1:3,19:23:20.66:495,21,0	1/1:2,8:11:12.04:329,12,0	1/1:2,9:11:33.10:692,33,0	1/1:2,9:11:12.04:300,12,0	1/1:3,18:25:12.04:260,12,0	1/1:3,16:20:20.40:429,20,0	1/1:1,13:15:18.06:462,18,0	1/1:3,16:21:15.04:344,15,0	1/1:2,7:11:12.04:255,12,0	1/1:3,9:17:42:799,42,0	1/1:3,5:9:9.03:183,9,0	1/1:0,3:6:12.04:285,12,0
chr10	61698244	.	CT	C	11599.18	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=15.012;DP=608;FS=5.022;HRun=1;HaplotypeScore=173.0102;InbreedingCoeff=0.9932;MQ=71.36;MQ0=0;MQRankSum=-3.405;QD=24.37;ReadPosRankSum=3.734;VQSLOD=4.8320;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:30,7:37:98.39:898,98,0	1/1:6,5:11:13.66:171,14,0	0/0:12,0:12:30.08:0,30,455	0/0:9,0:9:27.09:0,27,403	1/1:5,5:10:20.29:155,20,0	1/1:17,5:22:61.55:565,62,0	1/1:14,5:19:55.06:497,55,0	0/0:31,0:31:87.28:0,87,1348	0/0:23,0:23:69.21:0,69,1078	1/1:21,11:32:94.57:965,95,0	1/1:7,5:12:28.83:229,29,0	1/1:20,4:24:53.97:575,54,0	1/1:14,9:23:57.95:510,58,0	1/1:18,6:24:64.39:603,64,0	1/1:10,3:13:35.23:324,35,0	1/1:14,3:17:49.58:458,50,0	1/1:33,7:40:99:1041,110,0	1/1:30,6:36:99:933,101,0	1/1:6,10:16:46.64:338,47,0	1/1:10,3:13:32.63:296,33,0	1/1:43,13:56:99:1264,124,0	0/0:13,0:13:39.13:0,39,624	0/0:14,0:14:39.13:0,39,623	0/0:30,0:30:90.31:0,90,1439	1/1:14,9:23:46.09:420,46,0	1/1:19,4:23:68.46:726,68,0	1/1:14,5:19:51.34:431,51,0	1/1:6,0:6:18.04:201,18,0
chr10	61698247	.	A	AG	13013.62	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=13.722;DP=608;FS=6.684;HRun=1;HaplotypeScore=167.5175;InbreedingCoeff=0.9939;MQ=71.97;MQ0=0;MQRankSum=-5.724;QD=27.17;ReadPosRankSum=3.375;VQSLOD=4.4399;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:28,9:37:98.70:1062,99,0	1/1:7,5:12:18.90:223,19,0	0/0:12,0:12:24.07:0,24,302	0/0:9,0:10:24.05:0,24,279	1/1:7,4:11:20.42:174,20,0	1/1:18,5:23:65.62:680,66,0	1/1:15,5:20:53.09:512,53,0	0/0:29,0:29:81.26:0,81,1052	0/0:22,0:22:66.20:0,66,841	1/1:21,11:32:95.40:1062,95,0	1/1:7,5:12:29.54:264,30,0	1/1:19,4:23:36.14:634,36,0	1/1:15,9:24:58.06:512,58,0	1/1:20,6:26:68.13:709,68,0	1/1:9,3:12:32.66:331,33,0	1/1:15,3:18:50.62:541,51,0	1/1:30,9:39:99:1146,108,0	1/1:28,7:35:98.76:1047,99,0	1/1:5,11:16:44.41:398,44,0	1/1:8,3:11:26.87:288,27,0	1/1:41,14:55:99:1386,128,0	0/0:12,0:12:33.11:0,33,429	0/0:15,0:15:42.12:0,42,529	0/0:29,0:29:84.27:0,84,1091	1/1:14,9:23:47.26:483,47,0	1/1:20,4:24:71.85:831,72,0	1/1:16,5:21:56.61:557,57,0	1/1:5,0:5:15.04:171,15,0
chr10	61699892	.	TAGG	T	21564.35	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-4.627;DP=649;FS=0.803;HRun=0;HaplotypeScore=112.5792;InbreedingCoeff=0.9959;MQ=87.43;MQ0=0;MQRankSum=-8.379;QD=40.69;ReadPosRankSum=5.216;VQSLOD=6.1742;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,31:34:84.76:1333,85,0	1/1:0,12:12:30.09:482,30,0	0/0:27,0:27:75.26:0,75,1642	0/0:24,0:24:63.22:0,63,1324	1/1:2,22:24:57.19:889,57,0	1/1:1,18:19:54.18:868,54,0	1/1:1,29:30:81.28:1302,81,0	1/1:2,18:20:54.18:866,54,0	1/1:2,22:24:54.18:868,54,0	1/1:0,29:29:87.30:1396,87,0	1/1:0,15:15:42.14:675,42,0	1/1:3,21:24:54.18:868,54,0	1/1:2,21:23:60.20:957,60,0	1/1:2,26:28:72.25:1157,72,0	1/1:1,25:26:63.21:1012,63,0	1/1:0,22:22:57.19:916,57,0	1/1:3,37:40:90.31:1447,90,0	1/1:1,23:24:63.21:1012,63,0	1/1:4,9:13:27.09:433,27,0	1/1:4,16:20:48.16:755,48,0	1/1:2,28:30:72.24:1139,72,0	0/0:20,0:20:54.19:0,54,1187	0/0:13,0:13:39.13:0,39,861	0/0:35,0:35:96.33:0,96,2113	1/1:0,17:17:51.17:802,51,0	1/1:2,22:24:66.22:1048,66,0	1/1:1,25:26:69.23:1100,69,0	1/1:1,5:6:15.05:241,15,0
chr10	61701622	.	TA	T	1713.05	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=9.403;DP=596;FS=13.314;HRun=10;HaplotypeScore=59.7342;InbreedingCoeff=0.9510;MQ=75.08;MQ0=0;MQRankSum=-0.643;QD=19.69;ReadPosRankSum=1.253;VQSLOD=3.5946;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,1:35:58.12:0,58,835	0/0:12,0:12:33.07:0,33,356	0/0:13,0:13:3.09:0,3,215	0/0:10,0:10:17.94:0,18,178	0/0:28,0:28:81.19:0,81,879	0/0:22,0:22:63.16:0,63,688	0/0:22,0:22:37.30:0,37,557	1/1:2,14:17:44.03:370,44,0	0/0:17,0:17:42.08:0,42,447	0/0:32,0:32:84.23:0,84,929	0/0:22,0:22:54.15:0,54,597	0/0:25,0:25:75.13:0,75,786	0/0:29,0:29:81.20:0,81,884	0/0:21,0:21:57.13:0,57,621	0/0:31,0:31:74.98:0,75,800	0/0:14,0:14:36.09:0,36,390	0/0:21,1:22:28.08:0,28,529	0/0:17,0:17:51.08:0,51,541	0/0:22,0:22:54.15:0,54,597	0/0:20,0:20:60.09:0,60,626	0/0:16,0:16:42.09:0,42,455	1/1:2,25:27:71.94:618,72,0	1/1:3,19:22:50.46:442,50,0	1/1:3,18:21:50.97:443,51,0	0/0:17,0:17:51.14:0,51,564	0/0:25,0:25:66.17:0,66,723	0/0:25,0:25:66.18:0,66,730	0/0:10,0:12:32.91:0,33,337
chr10	61703137	.	G	GAC	1844.62	PASS	AB=1.000;AC=33;AF=0.611;AN=54;BaseQRankSum=-0.694;DP=511;FS=3.778;HRun=0;HaplotypeScore=118.6854;InbreedingCoeff=-0.1691;MQ=54.80;MQ0=10;MQRankSum=3.290;QD=4.14;ReadPosRankSum=3.413;VQSLOD=2.7398;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:26:26.67:27,0,54	0/0:7,0:7:3.19:0,3,22	0/0:31,0:7:3.01:0,3,30	0/0:23,0:3:8.69:0,9,74	0/1:11,0:11:28.23:29,0,28	1/1:20,0:20:1.65:32,2,0	0/1:36,0:35:27.14:27,0,181	0/1:17,0:17:21.75:86,0,22	0/1:13,0:13:4.49:4,0,12	0/1:15,0:15:29.09:29,0,39	0/1:9,0:9:0.16:0,0,0	1/1:22,0:21:1.69:32,2,0	0/1:11,0:11:26.08:45,0,26	0/1:26,0:26:2.01:2,0,39	0/1:10,0:10:19.86:108,0,20	1/1:18,0:18:6.41:83,6,0	0/1:20,0:20:3.69:4,0,27	0/1:18,0:18:13.77:14,0,18	0/1:17,0:17:10.16:184,0,10	1/1:12,0:12:6.02:69,6,0	0/1:41,0:40:98.28:98,0,113	1/1:8,1:9:17.58:184,18,0	./.	1/1:32,3:34:25.09:582,25,0	1/1:15,0:15:4.19:21,4,0	0/1:22,0:22:2.95:129,0,3	1/1:16,0:16:24.37:151,24,0	1/1:7,0:7:5.93:53,6,0
chr10	61703160	.	A	ACCAC	238.42	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=-1.452;DP=476;FS=9.334;HRun=0;HaplotypeScore=138.2990;InbreedingCoeff=0.2660;MQ=48.49;MQ0=22;MQRankSum=0.229;QD=6.81;ReadPosRankSum=-0.846;VQSLOD=1.6198;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:14.53:0,15,139	0/0:8,0:8:9.03:0,9,135	0/0:28,0:1:3.01:0,3,38	0/0:26,0:3:1.76:0,2,67	0/0:11,0:10:8.80:0,9,75	0/0:20,0:20:8.86:0,9,105	0/0:32,0:31:20.94:0,21,277	0/0:8,0:8:14.21:0,14,121	1/1:4,10:16:19.68:323,20,0	0/0:11,0:11:26.49:0,26,330	0/0:9,0:9:2.86:0,3,24	0/1:19,0:18:16.11:16,0,158	0/0:11,0:11:14.13:0,14,160	0/0:28,0:29:3.52:0,4,198	0/0:11,0:11:16.82:0,17,163	0/0:20,0:20:23.69:0,24,291	0/0:18,0:18:17.31:0,17,228	0/0:17,0:17:9.03:0,9,117	0/0:12,0:12:28.84:0,29,274	0/0:6,0:6:5.27:0,5,26	0/0:31,0:29:25.41:0,25,271	0/0:11,0:11:19.10:0,19,207	0/0:4,0:4:9.03:0,9,128	0/0:33,0:32:68.71:0,69,709	0/0:15,0:15:3.74:0,4,19	0/0:18,0:18:37.88:0,38,432	0/0:16,0:16:28.37:0,28,266	0/0:10,0:10:5.74:0,6,58
chr10	61703162	.	ACCAC	A	4689.16	PASS	AB=0.628;AC=35;AF=0.625;AN=56;BaseQRankSum=1.703;DP=471;FS=3.006;HRun=0;HaplotypeScore=114.6540;InbreedingCoeff=-0.0088;MQ=48.70;MQ0=22;MQRankSum=-1.892;QD=11.69;ReadPosRankSum=4.503;VQSLOD=4.0390;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:7,17:25:46.94:47,0,48	1/1:1,7:8:3.20:112,3,0	0/0:26,0:1:3.01:0,3,30	0/0:25,0:3:8.05:0,8,69	0/1:6,5:10:28.22:49,0,28	1/1:1,19:21:8.87:165,9,0	0/1:10,21:32:95.58:96,0,177	0/1:6,0:8:61.61:62,0,112	0/0:15,0:15:23.83:0,24,470	1/1:4,7:11:20.37:318,20,0	0/1:3,5:8:0.11:0,0,0	1/1:4,16:19:18.03:281,18,0	0/1:2,8:11:20.84:206,0,21	0/1:4,21:27:10.57:252,0,11	0/1:3,4:11:16.06:203,0,16	1/1:1,18:20:26.67:478,27,0	1/1:4,14:18:17.55:264,18,0	1/1:3,14:17:9.02:142,9,0	0/1:3,8:11:7.21:350,0,7	1/1:1,5:6:5.31:68,5,0	0/1:18,0:27:89.43:149,0,89	0/1:6,0:11:99:153,0,118	0/0:2,0:3:3.20:0,3,128	0/1:14,0:34:99:359,0,500	0/1:5,9:14:0:0,0,0	1/1:9,9:19:32.13:489,32,0	1/1:11,1:16:31.66:337,32,0	1/1:1,9:11:5.90:110,6,0
chr10	61704784	.	T	TAC	16926.03	PASS	AB=0.703;AC=41;AF=0.732;AN=56;BaseQRankSum=-1.345;DP=914;FS=0.473;HRun=0;HaplotypeScore=224.0031;InbreedingCoeff=0.1902;MQ=51.62;MQ0=10;MQRankSum=2.378;QD=21.24;ReadPosRankSum=4.506;VQSLOD=4.8473;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:36,18:53:17.34:744,17,0	1/1:6,8:13:32.54:499,33,0	0/0:37,0:16:21.05:0,21,248	0/0:45,0:31:8.94:0,9,277	1/1:13,13:26:51.16:784,51,0	0/1:10,6:15:15:241,0,15	0/1:20,13:33:9.28:646,0,9	0/0:35,0:34:52.36:0,52,781	0/1:27,0:31:49.24:49,0,77	0/1:17,19:35:0.11:963,0,0	1/1:11,16:27:35.57:568,36,0	1/1:11,21:30:54.15:842,54,0	1/1:16,18:33:25.25:868,25,0	1/1:14,19:34:22.28:778,22,0	1/1:14,22:36:25.51:865,26,0	0/1:18,28:46:25.34:1086,0,25	1/1:27,2:35:35.98:338,36,0	1/1:11,7:18:33.08:487,33,0	1/1:14,8:19:24.08:385,24,0	1/1:19,23:41:2.50:982,2,0	1/1:33,23:56:69.23:1095,69,0	0/1:13,20:33:99:391,0,106	1/1:13,23:36:59.85:905,60,0	0/1:21,17:36:57.90:619,0,58	0/1:11,11:22:26.83:528,0,27	1/1:12,23:34:75.25:1187,75,0	1/1:14,14:28:48.03:723,48,0	0/1:4,6:10:5.87:351,0,6
chr10	61704825	.	ACT	A	5035.29	PASS	AB=0.995;AC=34;AF=0.607;AN=56;BaseQRankSum=4.892;DP=907;FS=0.394;HRun=0;HaplotypeScore=357.2294;InbreedingCoeff=-0.3584;MQ=45.58;MQ0=19;MQRankSum=0.203;QD=5.88;ReadPosRankSum=12.681;VQSLOD=1.6068;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:42,0:41:40.51:130,0,41	1/1:13,0:13:7.21:137,7,0	0/0:18,0:6:5.27:0,5,83	0/0:33,0:20:32.92:0,33,486	1/1:20,0:20:8.39:141,8,0	0/1:14,0:13:8.85:43,0,9	0/1:37,1:38:7.94:206,0,8	0/1:46,0:41:99:265,0,149	0/1:29,0:29:16.38:113,0,16	0/1:31,0:31:6.33:245,0,6	1/1:31,1:32:3.56:200,4,0	1/1:35,0:35:11.19:258,11,0	1/1:35,1:36:4.96:312,5,0	1/1:40,0:40:69.32:404,69,0	0/1:43,0:43:31.19:205,0,31	0/1:54,0:54:67.46:323,0,67	0/1:36,0:34:46.89:183,0,47	0/1:19,0:19:30.45:216,0,30	0/1:27,0:15:15.31:120,0,15	0/1:40,0:39:99:200,0,103	0/1:56,0:53:99:134,0,132	0/1:30,1:31:15.97:89,0,16	0/1:39,0:39:58.19:162,0,58	0/1:44,0:44:14.04:129,0,14	0/1:19,0:19:0.70:81,0,1	1/1:40,0:39:74.96:467,75,0	0/1:22,1:23:7.76:194,0,8	1/1:9,0:8:14.39:78,14,0
chr10	61704827	.	TCA	T	16173.79	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=0.830;DP=892;FS=12.718;HRun=0;HaplotypeScore=317.4751;InbreedingCoeff=0.9639;MQ=45.71;MQ0=18;MQRankSum=1.732;QD=19.19;ReadPosRankSum=5.244;VQSLOD=4.0670;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:14,28:41:39.06:495,39,0	1/1:2,10:12:33.06:401,33,0	0/0:18,1:7:11.76:0,12,131	0/0:29,0:18:38.95:0,39,534	1/1:4,16:20:36.09:443,36,0	1/1:3,11:13:15.04:178,15,0	1/1:14,25:39:75.23:896,75,0	1/1:16,30:41:84.17:990,84,0	1/1:9,21:30:35.10:355,35,0	1/1:8,23:31:73.76:898,74,0	1/1:9,21:30:50.43:615,50,0	1/1:5,29:34:60.67:745,61,0	1/1:5,31:36:69.64:846,70,0	1/1:5,35:40:81.19:983,81,0	1/1:5,38:43:52.54:650,53,0	1/1:12,41:53:90.09:1115,90,0	1/1:10,24:32:41.10:597,41,0	1/1:6,13:19:40.80:523,41,0	1/1:13,12:15:30.08:366,30,0	1/1:6,34:39:55.87:690,56,0	1/1:32,23:52:42.13:531,42,0	1/1:5,24:29:31.44:373,31,0	1/1:7,32:39:51.15:635,51,0	1/1:17,28:45:38.73:496,39,0	1/1:3,16:19:21.06:267,21,0	1/1:5,35:39:99:1363,111,0	1/1:6,15:21:43.69:533,44,0	1/1:1,6:6:15.05:191,15,0
chr10	61704893	.	TTTCACACA	T	10132.45	PASS	AB=0.670;AC=46;AF=0.821;AN=56;BaseQRankSum=12.254;DP=818;FS=1.734;HRun=0;HaplotypeScore=434.3618;InbreedingCoeff=0.5504;MQ=44.83;MQ0=3;MQRankSum=-6.002;QD=16.26;ReadPosRankSum=3.032;VQSLOD=2.3289;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:12,12:24:8.33:114,8,0	1/1:5,10:15:28.85:494,29,0	0/0:57,0:43:99:0,102,2964	0/0:37,0:26:71.22:0,71,1347	1/1:7,13:20:7.94:71,8,0	1/1:7,9:16:8.44:111,8,0	1/1:11,12:24:2.77:265,3,0	0/0:57,0:57:99:0,168,4817	0/0:44,0:44:22.13:0,22,2104	1/1:10,22:34:72.47:1873,72,0	1/1:10,18:28:9.42:98,9,0	0/1:17,14:30:6.14:491,0,6	1/1:17,16:32:46.75:700,47,0	1/1:10,14:24:28.94:437,29,0	1/1:18,21:38:15.88:229,16,0	1/1:17,30:47:73.66:1151,74,0	1/1:14,6:19:13.01:353,13,0	1/1:7,5:12:6.94:394,7,0	1/1:5,6:11:11.77:470,12,0	0/1:13,15:28:9.86:176,0,10	1/1:32,9:41:10.83:118,11,0	1/1:9,28:37:7.94:62,8,0	1/1:10,14:24:2.03:106,2,0	1/1:25,10:35:9.51:127,10,0	1/1:5,23:28:7.63:145,8,0	1/1:15,16:31:37.69:1404,38,0	1/1:8,10:18:0.10:544,0,0	1/1:1,2:3:9.03:199,9,0
chr10	61704894	.	TTC	T	1222.48	PASS	AB=0.949;AC=21;AF=0.375;AN=56;BaseQRankSum=12.108;DP=809;FS=0.824;HRun=0;HaplotypeScore=410.2177;InbreedingCoeff=-0.4321;MQ=43.78;MQ0=3;MQRankSum=-11.108;QD=2.51;ReadPosRankSum=9.482;VQSLOD=0.3168;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:23:7.37:7,0,41	0/1:14,1:15:73.20:73,0,163	0/0:55,0:41:99:0,100,1773	0/0:36,0:25:58.46:0,58,937	0/1:18,3:21:11.85:12,0,102	0/1:14,2:16:2.51:3,0,32	0/0:24,0:24:10.08:0,10,393	0/0:58,0:58:99:0,171,3057	0/0:44,0:44:72.12:0,72,1213	0/1:33,1:34:99:259,0,222	0/0:26,1:27:20.46:0,20,244	0/1:30,0:29:59.76:60,0,359	0/1:29,3:31:58.99:59,0,267	0/1:22,0:22:24.54:25,0,193	0/1:35,4:38:17.86:18,0,215	0/1:46,1:47:99:214,0,210	0/1:18,1:18:63.95:64,0,318	0/1:9,2:12:78.37:78,0,154	0/1:11,0:11:35.53:36,0,155	0/1:26,2:28:62.89:63,0,295	0/0:39,1:40:22.08:0,22,298	0/0:33,4:37:11.81:0,12,155	0/1:22,2:24:12.97:13,0,211	0/1:35,0:35:8.77:9,0,215	0/1:27,1:28:19.01:19,0,47	0/1:28,2:30:99:235,0,445	0/1:18,0:18:67.61:68,0,162	1/1:3,0:3:8.37:70,8,0
chr10	61704903	.	TCA	T	2564.95	PASS	AB=0.681;AC=44;AF=0.786;AN=56;BaseQRankSum=11.004;DP=863;FS=2.920;HRun=0;HaplotypeScore=407.9524;InbreedingCoeff=0.4375;MQ=41.28;MQ0=3;MQRankSum=-6.915;QD=3.90;ReadPosRankSum=4.572;VQSLOD=1.1145;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:14,11:25:10.18:10,0,18	1/1:7,10:17:1.93:128,2,0	0/0:52,0:33:76.94:0,77,1154	0/0:36,0:18:26.05:0,26,489	1/1:8,13:21:0.12:1,0,0	1/1:8,9:17:6.44:46,6,0	1/1:19,12:31:8.60:69,9,0	0/0:47,0:47:99:0,108,1789	0/0:46,0:46:63.20:0,63,1077	1/1:19,22:41:6.45:472,6,0	0/0:6,18:24:0.23:0,0,2	1/1:26,14:39:0.52:133,1,0	1/1:20,16:35:36.17:257,36,0	1/1:15,13:28:15.27:113,15,0	1/1:23,21:43:6.44:32,6,0	1/1:16,30:46:42.64:279,43,0	1/1:16,6:21:17.94:120,18,0	1/1:10,5:15:18.05:131,18,0	1/1:7,6:12:2.24:116,2,0	1/1:12,15:27:5.70:34,6,0	1/1:38,9:46:2.25:45,2,0	1/1:14,28:42:3.83:23,4,0	1/1:8,14:22:2.87:19,3,0	1/1:27,10:37:0.39:23,0,0	1/1:7,23:30:5.18:36,5,0	1/1:16,16:32:57.01:439,57,0	1/1:9,11:20:22.39:141,22,0	0/1:2,2:4:9.39:58,0,9
chr10	61704971	.	A	ACACT	1434.04	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-1.814;DP=1196;FS=1.572;HRun=0;HaplotypeScore=264.0037;InbreedingCoeff=0.9919;MQ=51.56;MQ0=8;MQRankSum=-0.312;QD=27.58;ReadPosRankSum=-1.301;VQSLOD=2.8055;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:49:88.16:0,88,1499	0/0:18,0:18:45.14:0,45,737	0/0:41,0:14:18.03:0,18,248	0/0:43,0:22:44.75:0,45,613	0/0:31,0:31:72.17:0,72,1218	0/0:24,0:24:48.16:0,48,830	0/0:38,0:38:68.85:0,69,1089	0/0:67,0:63:99:0,141,2219	1/1:12,39:52:62.87:1529,63,0	0/0:47,0:47:99:0,108,1679	0/0:25,0:25:42.13:0,42,686	0/0:61,0:61:99:0,114,1891	0/0:47,0:47:98.87:0,99,1617	0/0:54,0:54:99:0,117,1975	0/0:65,0:65:99:0,120,2025	0/0:59,1:60:56.23:0,56,2015	0/0:37,0:36:76.07:0,76,1290	0/0:30,0:31:46.47:0,46,1178	0/0:23,0:20:45:0,45,623	0/0:32,0:32:72.62:0,73,1151	0/0:89,0:88:99:0,109,1705	0/0:38,0:38:78.24:0,78,1277	0/0:25,0:25:60.16:0,60,966	0/0:61,0:60:99:0,102,1632	0/0:29,0:29:48.15:0,48,794	0/0:50,0:50:99:0,129,2088	0/0:34,0:34:66.64:0,67,1058	0/0:24,0:24:54.18:0,54,939
chr10	61705062	.	C	CACACACAT	1779.01	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=-4.685;DP=1194;FS=3.712;HRun=0;HaplotypeScore=357.7652;InbreedingCoeff=0.7602;MQ=53.51;MQ0=18;MQRankSum=-2.079;QD=14.46;ReadPosRankSum=-3.043;VQSLOD=1.4690;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:82.75:0,83,1433	0/0:18,0:18:36.12:0,36,656	0/1:59,0:24:0.17:0,0,123	0/0:38,0:17:11.52:0,12,153	0/0:32,0:32:54.19:0,54,1006	0/0:25,0:25:20.39:0,20,375	0/0:42,0:42:39:0,39,689	0/0:51,0:50:39.12:0,39,788	1/1:45,19:64:65.79:1874,66,0	0/0:51,0:51:61.30:0,61,1317	0/0:28,0:28:32.97:0,33,615	0/0:47,0:47:59.94:0,60,1117	0/0:49,0:49:62.16:0,62,1052	0/0:39,0:39:51.17:0,51,950	0/0:51,0:51:57.09:0,57,1047	0/0:65,0:65:45.48:0,45,942	0/0:30,0:30:41.02:0,41,754	0/0:47,0:47:68.26:0,68,1235	0/0:22,0:17:31.28:0,31,516	0/0:38,0:37:53.86:0,54,1005	0/0:99,0:98:99:0,132,2452	0/0:45,0:45:66.21:0,66,1502	0/0:34,0:34:75.26:0,75,1820	0/0:58,0:58:67.06:0,67,1643	0/0:30,0:30:52.73:0,53,935	0/0:45,0:45:81.44:0,81,1524	0/0:19,0:19:24.08:0,24,434	0/0:15,0:15:25.64:0,26,451
chr10	61705070	.	TACAC	T	23844.86	PASS	AB=0.681;AC=41;AF=0.732;AN=56;BaseQRankSum=10.009;DP=1194;FS=0.627;HRun=0;HaplotypeScore=201.7442;InbreedingCoeff=0.9080;MQ=53.65;MQ0=18;MQRankSum=2.832;QD=28.12;ReadPosRankSum=9.696;VQSLOD=3.5399;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,49:53:81.03:1518,81,0	1/1:0,19:19:36.12:682,36,0	0/0:62,0:19:41.88:0,42,805	0/0:43,0:19:37.23:0,37,828	1/1:1,31:32:54.19:1024,54,0	1/1:2,24:26:23.28:453,23,0	1/1:6,36:42:39.42:740,39,0	0/0:51,0:50:99:0,135,3008	0/0:65,0:65:99:0,99,1922	1/1:3,46:49:99:2221,129,0	1/1:3,25:28:33.11:626,33,0	1/1:3,47:50:60.07:1190,60,0	1/1:2,48:50:68.49:1294,68,0	1/1:3,36:39:51.05:967,51,0	1/1:5,52:57:57.09:1081,57,0	1/1:4,56:60:66.01:1237,66,0	0/1:17,15:32:31.02:1046,0,31	1/1:4,38:42:72.25:1362,72,0	1/1:4,20:18:49.92:834,50,0	1/1:1,36:36:54.11:1025,54,0	1/1:8,92:99:99:2481,112,0	0/0:38,0:38:90.24:0,90,2186	0/0:31,0:31:87.30:0,87,2248	0/0:55,0:55:98.48:0,98,2353	1/1:2,27:29:50.13:1014,50,0	1/1:4,39:43:99:2037,114,0	1/1:2,18:20:24.60:501,25,0	1/1:0,16:16:27.09:509,27,0
chr10	61706638	.	CT	C	1435.01	PASS	AB=0.963;AC=41;AF=0.891;AN=46;BaseQRankSum=2.582;DP=195;FS=0.838;HRun=1;HaplotypeScore=59.8565;InbreedingCoeff=0.2691;MQ=66.76;MQ0=1;MQRankSum=-2.735;QD=9.70;ReadPosRankSum=-1.801;VQSLOD=0.6433;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,4:10:7.16:105,7,0	./.	0/0:16,0:6:10.89:0,11,142	0/1:24,1:15:23.12:23,0,263	1/1:7,5:12:1.82:5,2,0	1/1:5,3:8:8.80:88,9,0	1/1:0,6:6:9.03:123,9,0	0/0:21,0:21:56.94:0,57,587	1/1:3,1:4:2.26:43,2,0	1/1:2,0:2:5.84:34,6,0	./.	1/1:1,1:2:5.95:59,6,0	1/1:3,0:3:4.46:36,4,0	1/1:4,5:9:9.42:229,9,0	1/1:3,1:4:2.84:19,3,0	1/1:3,3:6:9.68:107,10,0	1/1:5,4:9:4.07:109,4,0	1/1:3,1:4:11.91:98,12,0	1/1:4,9:13:26.14:321,26,0	1/1:3,3:6:2.01:17,2,0	1/1:7,2:9:4.21:22,4,0	1/1:1,2:2:5.85:34,6,0	./.	1/1:3,1:4:2.92:18,3,0	./.	1/1:1,1:2:3.01:37,3,0	1/1:6,0:6:0.67:30,1,0	./.
chr10	61707924	.	T	TCACA	2439	PASS	AB=0.860;AC=46;AF=0.920;AN=50;BaseQRankSum=-1.752;DP=596;FS=6.458;HRun=0;HaplotypeScore=145.8542;InbreedingCoeff=0.2060;MQ=51.74;MQ0=15;MQRankSum=-1.096;QD=4.82;ReadPosRankSum=-1.902;VQSLOD=1.8243;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:39,0:38:12:171,12,0	1/1:4,0:3:3.01:31,3,0	./.	./.	1/1:18,0:18:9.03:121,9,0	1/1:20,0:19:6.02:80,6,0	1/1:38,0:36:8.73:120,9,0	1/1:18,0:18:21.03:325,21,0	0/0:7,0:16:17.66:0,18,167	1/1:23,0:21:21.05:271,21,0	1/1:16,0:16:12:140,12,0	1/1:20,0:20:6.49:90,6,0	1/1:14,0:14:2.83:48,3,0	1/1:26,0:26:3.01:54,3,0	1/1:26,0:25:9.01:130,9,0	1/1:12,0:12:9.03:166,9,0	0/1:20,0:18:0:1,0,0	1/1:13,0:22:9.85:123,10,0	1/1:13,0:12:9.02:134,9,0	./.	1/1:25,0:22:2.89:31,3,0	1/1:20,0:24:5.47:24,5,0	1/1:9,2:12:2.83:70,3,0	0/1:22,10:36:16.14:16,0,38	1/1:29,0:28:2.91:64,3,0	1/1:22,0:20:19.85:250,20,0	1/1:11,0:16:2.99:24,3,0	1/1:9,0:8:6:66,6,0
chr10	61708115	.	C	CA	738.53	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-6.347;DP=557;FS=8.787;HRun=7;HaplotypeScore=73.1415;InbreedingCoeff=0.9294;MQ=78.81;MQ0=0;MQRankSum=-2.513;QD=27.35;ReadPosRankSum=-0.007;VQSLOD=4.0064;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:90.10:0,90,860	0/0:7,0:7:21.03:0,21,203	0/0:18,0:17:17.50:0,18,386	0/0:20,0:21:44.05:0,44,390	0/0:25,0:25:51.01:0,51,482	0/0:29,0:29:78.12:0,78,753	0/0:19,0:19:51.05:0,51,480	0/0:29,0:29:75.08:0,75,716	1/1:2,25:27:69.21:833,69,0	0/0:22,0:22:54.07:0,54,517	0/0:9,0:9:21.03:0,21,203	0/0:18,0:18:48.08:0,48,463	0/0:21,0:21:54.08:0,54,521	0/0:21,0:21:54.06:0,54,515	0/0:19,0:19:42.06:0,42,406	0/0:15,0:15:36.05:0,36,348	0/0:21,0:21:54.09:0,54,521	0/0:21,0:20:51.08:0,51,492	0/0:22,0:22:53.91:0,54,507	0/0:13,0:13:36.06:0,36,348	0/0:19,0:19:51.08:0,51,492	0/0:25,0:25:57.06:0,57,545	0/0:17,0:17:42.06:0,42,403	0/0:14,0:14:36.06:0,36,348	0/0:22,0:22:51.07:0,51,492	0/0:22,0:22:48.06:0,48,461	0/0:16,0:15:45.05:0,45,428	0/0:3,0:3:9.01:0,9,87
chr10	61708168	.	C	CA	13461.52	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-12.210;DP=535;FS=0.425;HRun=6;HaplotypeScore=57.7983;InbreedingCoeff=0.9924;MQ=96.64;MQ0=0;MQRankSum=-5.893;QD=32.20;ReadPosRankSum=6.437;VQSLOD=4.3199;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,31:32:78.25:981,78,0	1/1:0,6:6:18.06:226,18,0	0/0:35,0:35:83.94:0,84,817	0/0:19,0:19:37.86:0,38,393	1/1:0,23:23:54.17:679,54,0	1/1:3,14:17:42.13:528,42,0	1/1:2,15:17:45.14:566,45,0	0/0:44,0:44:99:0,99,1005	0/0:19,0:19:54.12:0,54,551	1/1:0,15:15:33.11:415,33,0	1/1:2,11:13:36.07:435,36,0	1/1:1,18:19:51.16:642,51,0	1/1:2,17:19:51.16:640,51,0	1/1:0,15:15:45.14:566,45,0	1/1:2,11:13:33.11:415,33,0	1/1:1,16:17:45.14:566,45,0	1/1:0,25:25:69.22:868,69,0	1/1:0,15:15:39.12:491,39,0	1/1:4,21:25:69.22:864,69,0	1/1:1,15:16:39.09:474,39,0	1/1:3,15:18:42.13:528,42,0	1/1:1,17:18:48.15:604,48,0	1/1:1,14:15:42.13:528,42,0	1/1:3,9:12:24.08:302,24,0	1/1:3,11:14:33.11:415,33,0	1/1:1,23:24:57.04:716,57,0	1/1:2,23:24:66.21:823,66,0	1/1:0,5:5:15.05:189,15,0
chr10	61708281	.	CT	C	21176.62	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=5.407;DP=629;FS=12.066;HRun=2;HaplotypeScore=63.4229;InbreedingCoeff=0.9987;MQ=94.26;MQ0=0;MQRankSum=-9.283;QD=39.29;ReadPosRankSum=8.872;VQSLOD=2.8270;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,39:39:99:1509,108,0	1/1:0,9:9:27.09:377,27,0	0/0:28,0:28:81.26:0,81,1255	0/0:28,0:28:76.80:0,77,1151	1/1:0,26:26:69.23:964,69,0	1/1:0,19:19:57.19:797,57,0	1/1:0,14:14:39.13:545,39,0	0/0:34,0:34:99:0,102,1567	1/1:0,18:18:51.17:713,51,0	1/1:1,25:26:75.24:1033,75,0	1/1:0,16:16:36.12:503,36,0	1/1:0,22:22:60.20:839,60,0	1/1:0,19:19:54.18:754,54,0	1/1:1,22:23:60.20:830,60,0	1/1:0,25:25:72.24:1006,72,0	1/1:0,18:18:48.16:671,48,0	1/1:0,33:33:99:1384,99,0	1/1:0,23:23:60.20:839,60,0	1/1:0,11:11:33.11:459,33,0	1/1:0,28:28:81.27:1126,81,0	1/1:0,22:22:66.22:922,66,0	1/1:0,26:26:75.25:1047,75,0	1/1:1,28:29:81.27:1118,81,0	1/1:0,20:20:60.20:839,60,0	1/1:0,20:20:54.18:745,54,0	1/1:0,24:24:72.24:1006,72,0	1/1:2,19:21:60.19:817,60,0	1/1:0,8:8:24.08:335,24,0
chr10	61709710	.	A	AGACCTCAGAAGAAGG	108125.98	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-4.499;DP=745;FS=4.002;HRun=0;HaplotypeScore=269.5671;InbreedingCoeff=0.9917;MQ=66.23;MQ0=0;MQRankSum=-10.224;QD=154.03;ReadPosRankSum=4.352;VQSLOD=4.9613;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:17,22:42:99:6337,102,0	1/1:4,8:12:33.58:2094,34,0	0/0:19,0:19:51.16:0,51,1910	0/0:24,0:24:58.60:0,59,1843	1/1:12,7:20:45.63:2036,46,0	1/1:6,10:17:48.16:2899,48,0	1/1:20,9:31:72.25:4278,72,0	1/1:46,1:49:99:8248,144,0	1/1:12,12:27:72.25:4540,72,0	1/1:15,8:24:72.25:4359,72,0	1/1:16,10:27:63.15:2748,63,0	1/1:13,17:31:84.29:5236,84,0	1/1:8,15:24:66.23:4214,66,0	1/1:13,16:32:75.26:4797,75,0	1/1:17,23:45:99:7827,117,0	1/1:6,16:24:66.18:4451,66,0	1/1:14,7:22:60.21:3386,60,0	1/1:11,12:24:63.22:4070,63,0	1/1:9,5:15:42.14:2249,42,0	1/1:14,15:32:87.23:4661,87,0	1/1:16,3:21:39.13:2100,39,0	1/1:6,10:18:48.16:2490,48,0	1/1:15,10:28:75.26:3834,75,0	1/1:16,9:27:57.19:2843,57,0	1/1:19,11:31:87.26:4435,87,0	1/1:12,20:34:96.33:6367,96,0	1/1:22,16:38:99:6524,111,0	1/1:2,3:6:15.05:1104,15,0
chr10	61710347	.	C	CT	17290.13	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=6.120;DP=659;FS=2.176;HRun=7;HaplotypeScore=97.9435;InbreedingCoeff=0.9760;MQ=76.07;MQ0=0;MQRankSum=-2.407;QD=30.02;ReadPosRankSum=4.967;VQSLOD=4.4081;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,43:46:99:1396,117,0	1/1:4,10:14:10.20:339,10,0	0/0:14,0:14:18.59:0,19,173	0/0:14,0:13:32.98:0,33,297	1/1:1,20:21:60.18:725,60,0	1/1:2,18:20:51.16:616,51,0	1/1:5,18:23:46.74:526,47,0	0/0:30,0:30:69.07:0,69,655	0/0:25,0:25:72.08:0,72,683	1/1:0,28:28:84.26:1014,84,0	1/1:3,17:20:25.16:572,25,0	1/1:2,21:23:51.16:616,51,0	1/1:2,26:28:69.21:834,69,0	1/1:4,24:28:63.19:755,63,0	1/1:4,17:21:51.16:616,51,0	1/1:2,16:18:42.13:508,42,0	1/1:2,39:41:99:1377,114,0	1/1:2,18:20:45.14:544,45,0	1/1:6,17:23:25.08:567,25,0	1/1:2,26:28:81.16:945,81,0	1/1:2,17:19:48.15:580,48,0	1/1:1,22:23:66.20:793,66,0	1/1:2,13:15:33.10:399,33,0	1/1:2,25:27:72.22:869,72,0	1/1:0,25:25:72.22:870,72,0	1/1:5,27:32:78.22:929,78,0	1/1:5,22:26:63.19:757,63,0	1/1:2,4:6:12.04:145,12,0
chr10	61710969	.	TAAG	T	20576.26	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=12.231;DP=677;FS=7.907;HRun=0;HaplotypeScore=148.4533;InbreedingCoeff=0.9980;MQ=83.16;MQ0=0;MQRankSum=-6.426;QD=34.93;ReadPosRankSum=10.342;VQSLOD=3.9669;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:3,45:48:96.24:1471,96,0	1/1:1,15:16:36.12:563,36,0	0/0:22,0:22:51.14:0,51,971	0/0:24,0:24:57.06:0,57,1022	1/1:1,24:26:51.02:738,51,0	1/1:3,16:19:36.12:563,36,0	1/1:3,23:26:60.20:938,60,0	0/0:42,0:42:99:0,108,2148	1/1:1,22:23:57.19:891,57,0	1/1:3,22:25:66.07:950,66,0	1/1:2,14:16:27.09:421,27,0	1/1:0,19:19:51.17:797,51,0	1/1:2,19:21:45.15:703,45,0	1/1:3,18:21:51.17:797,51,0	1/1:1,25:26:48.16:750,48,0	1/1:0,20:20:54.18:844,54,0	1/1:1,30:31:75.26:1173,75,0	1/1:3,24:27:60.20:938,60,0	1/1:4,20:24:54.18:842,54,0	1/1:1,25:26:69.23:1075,69,0	1/1:1,25:26:51.17:797,51,0	1/1:4,25:29:57.11:860,57,0	1/1:2,19:21:35.21:562,35,0	1/1:2,23:25:60.20:938,60,0	1/1:1,16:17:48.16:739,48,0	1/1:2,15:17:45.14:682,45,0	1/1:2,27:29:78.26:1218,78,0	1/1:0,11:11:21.07:328,21,0
chr10	61712755	.	GA	G	831.27	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.880;DP=727;FS=13.586;HRun=3;HaplotypeScore=70.5452;InbreedingCoeff=0.9701;MQ=68.47;MQ0=0;MQRankSum=-1.103;QD=30.79;ReadPosRankSum=-2.746;VQSLOD=1.4756;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,150,2034	0/0:12,0:12:36.11:0,36,499	0/0:23,0:22:60.13:0,60,806	0/0:22,0:22:60.14:0,60,772	0/0:22,0:22:66.19:0,66,897	0/0:20,0:20:60.06:0,60,819	0/0:29,0:29:73.26:0,73,1114	1/1:1,26:27:75.23:926,75,0	0/0:18,0:18:54.16:0,54,743	0/0:39,0:39:99:0,117,1684	0/0:23,0:23:63.21:0,63,903	0/0:35,0:35:99:0,105,1406	0/0:25,0:25:75.17:0,75,1018	0/0:34,0:34:99:0,102,1397	0/0:21,0:21:60.17:0,60,811	0/0:25,0:25:72.23:0,72,1017	0/0:38,0:38:99:0,107,1471	0/0:23,0:23:69.22:0,69,973	0/0:16,0:16:39.12:0,39,545	0/0:25,0:25:75.24:0,75,1062	0/0:28,0:28:84.28:0,84,1207	0/0:31,0:31:87.26:0,87,1212	0/0:28,0:28:78.20:0,78,1031	0/0:34,0:34:99:0,99,1348	0/0:20,0:20:60.20:0,60,855	0/0:29,0:29:87.27:0,87,1219	0/0:25,0:24:72.22:0,72,1000	0/0:4,0:4:12.04:0,12,172
chr10	61713091	.	A	AACACAC	8419.23	PASS	AB=0.748;AC=40;AF=0.800;AN=50;BaseQRankSum=-4.227;DP=698;FS=0.000;HRun=0;HaplotypeScore=191.5478;InbreedingCoeff=0.3182;MQ=65.40;MQ0=8;MQRankSum=-3.748;QD=15.25;ReadPosRankSum=-2.647;VQSLOD=3.9608;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:28,8:38:0.18:269,0,0	1/1:8,0:9:6.02:137,6,0	./.	./.	1/1:13,7:22:6.02:135,6,0	1/1:13,4:19:9.03:288,9,0	1/1:21,1:33:9.03:125,9,0	0/0:20,0:20:2.29:0,2,6	1/1:9,0:20:6.01:64,6,0	1/1:16,0:26:45.11:974,45,0	1/1:17,0:19:3.01:45,3,0	0/1:22,8:35:3.07:556,0,3	1/1:10,9:24:18.06:522,18,0	1/1:14,6:25:30.10:775,30,0	1/1:7,8:19:18.06:547,18,0	1/1:17,12:34:35.25:972,35,0	1/1:19,5:28:21.07:485,21,0	1/1:15,6:24:19.16:547,19,0	1/1:18,0:17:11.70:231,12,0	1/1:21,0:21:6.01:122,6,0	0/1:28,0:39:32.57:33,0,42	0/0:15,0:23:6.41:0,6,49	0/0:16,0:21:5.81:0,6,122	0/1:19,0:34:12.02:12,0,43	1/1:6,8:16:12.04:379,12,0	1/1:15,0:25:36.09:693,36,0	1/1:10,6:20:24.05:510,24,0	./.
chr10	61713454	.	TAC	T	621.24	PASS	AB=0.962;AC=17;AF=0.327;AN=52;BaseQRankSum=4.280;DP=568;FS=4.757;HRun=0;HaplotypeScore=81.5916;InbreedingCoeff=0.1511;MQ=59.85;MQ0=15;MQRankSum=1.306;QD=2.85;ReadPosRankSum=2.139;VQSLOD=1.6424;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:27,1:27:12.20:35,0,12	1/1:6,0:6:4.56:32,5,0	./.	./.	1/1:8,5:14:8.09:46,8,0	0/0:28,0:26:21.75:0,22,292	0/0:26,0:26:27.06:0,27,356	0/0:27,0:27:2.68:0,3,11	0/1:15,0:14:0:0,0,0	0/0:24,0:22:19.42:0,19,249	0/0:19,0:18:11.05:0,11,99	0/0:18,0:20:12.47:0,12,120	0/0:18,0:18:29.93:0,30,348	0/0:20,0:20:9.03:0,9,133	0/1:15,1:16:14.18:14,0,157	0/1:15,0:15:6.26:6,0,159	0/0:26,0:25:2.63:0,3,228	1/1:7,2:8:5.70:52,6,0	1/1:8,0:8:1.24:3,1,0	0/0:17,0:17:18.03:0,18,225	0/0:25,0:25:3.47:0,3,105	0/1:13,4:16:4.87:94,0,5	0/1:19,0:18:28.19:34,0,28	0/1:36,0:36:4.50:397,0,5	0/1:19,0:19:14.87:15,0,81	0/0:16,0:16:12.72:0,13,97	0/1:15,1:16:38.25:38,0,224	0/0:11,0:12:11.99:0,12,101
chr10	61713476	.	C	CACAC	334.97	PASS	AB=1.000;AC=25;AF=0.481;AN=52;BaseQRankSum=-0.964;DP=604;FS=4.427;HRun=0;HaplotypeScore=118.2849;InbreedingCoeff=-0.0305;MQ=51.03;MQ0=21;MQRankSum=-1.448;QD=0.84;ReadPosRankSum=-4.657;VQSLOD=0.5487;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:31:4.26:0,4,32	1/1:11,0:11:5.99:59,6,0	./.	./.	1/1:16,0:16:5.01:31,5,0	0/1:32,0:30:13.64:14,0,144	0/1:30,0:29:1.39:1,0,218	1/1:20,0:19:1.55:5,2,0	0/1:23,0:22:0:0,0,0	0/1:18,0:16:25.65:26,0,178	0/1:15,0:14:10.06:10,0,15	0/1:25,0:25:7.48:7,0,40	0/0:22,0:22:13.67:0,14,218	0/0:20,0:20:8.76:0,9,137	0/0:20,0:20:11.86:0,12,107	0/1:14,0:14:29.35:29,0,146	0/1:35,0:34:19.74:20,0,187	0/0:17,0:16:2.39:0,2,27	1/1:6,0:6:3:26,3,0	0/0:24,0:24:12.04:0,12,178	0/1:26,0:26:9.74:65,0,10	0/1:17,0:16:6.97:7,0,43	0/0:18,0:15:8.60:0,9,64	0/1:40,0:40:4.79:5,0,302	0/1:20,0:20:12.22:21,0,12	1/1:15,0:15:10.51:67,11,0	0/1:24,0:24:9.10:9,0,115	1/1:6,4:11:9.44:84,9,0
chr10	61713956	.	CT	C	172.19	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=3.379;DP=383;FS=3.908;HRun=1;HaplotypeScore=68.3414;InbreedingCoeff=0.4298;MQ=94.82;MQ0=1;MQRankSum=-2.870;QD=8.20;ReadPosRankSum=-2.846;VQSLOD=-0.0296;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:26.35:0,26,244	0/1:7,0:7:0.47:0,0,141	0/0:21,0:20:47.68:0,48,703	0/0:26,0:25:42.82:0,43,745	0/0:7,0:7:6.14:0,6,58	0/0:14,0:14:19.82:0,20,176	0/0:20,0:20:42.27:0,42,416	1/1:7,7:14:33.35:266,33,0	0/0:35,0:35:99:0,102,1391	0/0:11,0:11:17.75:0,18,168	0/0:5,0:5:4.71:0,5,46	0/0:19,3:22:20.79:0,21,422	0/0:11,1:12:20.33:0,20,167	0/0:14,0:14:27.69:0,28,316	0/0:18,1:19:31.08:0,31,393	0/0:8,1:9:23.47:0,23,215	0/0:10,0:10:15.32:0,15,179	0/0:15,0:15:36.14:0,36,393	0/0:5,1:6:9:0,9,97	0/0:3,0:3:2.99:0,3,25	0/0:12,1:13:17.70:0,18,162	0/0:16,0:16:42.14:0,42,641	0/0:8,0:8:14.28:0,14,194	0/0:40,0:40:99:0,120,1774	0/0:4,0:4:2.49:0,2,56	0/0:2,1:3:5.95:0,6,51	0/0:10,0:10:20.87:0,21,197	0/0:4,0:4:9.29:0,9,87
chr10	61714527	.	A	ATTGGG	53107.66	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-5.835;DP=708;FS=1.301;HRun=0;HaplotypeScore=114.5359;InbreedingCoeff=0.9706;MQ=78.29;MQ0=0;MQRankSum=-10.467;QD=80.10;ReadPosRankSum=4.933;VQSLOD=6.9654;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,23:32:84.29:2472,84,0	1/1:2,14:16:48.16:1474,48,0	0/0:21,0:21:57.15:0,57,1122	0/0:24,0:24:60.21:0,60,1258	1/1:3,20:23:66.23:1944,66,0	1/1:0,17:19:51.18:1595,51,0	1/1:5,18:25:66.23:1955,66,0	1/1:19,19:42:99:3347,120,0	1/1:1,15:17:48.16:1497,48,0	1/1:11,28:40:99:3077,102,0	1/1:2,18:22:57.20:1719,57,0	1/1:6,15:24:57.20:1707,57,0	1/1:6,16:23:57.20:1662,57,0	1/1:6,22:28:81.23:2405,81,0	1/1:8,32:41:99:3374,111,0	1/1:8,23:32:87.30:2499,87,0	1/1:5,20:26:60.21:1876,60,0	1/1:2,16:19:45.15:1354,45,0	1/1:7,15:22:60.21:1753,60,0	1/1:4,25:29:78.27:2398,78,0	1/1:3,11:15:30.10:939,30,0	1/1:1,31:33:87.30:2721,87,0	1/1:3,20:24:69.24:2103,69,0	1/1:2,20:23:57.56:1786,58,0	1/1:4,22:26:66.23:1984,66,0	1/1:5,25:30:84.29:2603,84,0	1/1:6,22:28:84.29:2627,84,0	1/1:3,1:4:9.03:237,9,0
chr10	61716045	.	GA	G	12160.05	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=9.629;DP=749;FS=0.000;HRun=10;HaplotypeScore=78.4777;InbreedingCoeff=0.9997;MQ=74.25;MQ0=0;MQRankSum=-2.565;QD=22.03;ReadPosRankSum=3.502;VQSLOD=5.4475;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,26:31:74.87:641,75,0	1/1:0,12:12:32.99:287,33,0	0/0:21,0:22:32.92:0,33,339	0/0:17,0:17:28.45:0,28,331	1/1:1,25:26:74.95:645,75,0	1/1:3,20:23:53.99:469,54,0	1/1:3,13:16:32.97:287,33,0	0/0:40,0:40:70.21:0,70,1003	0/0:33,0:34:90.05:0,90,962	1/1:7,32:39:96.32:886,96,0	1/1:2,20:22:59.99:521,60,0	1/1:3,27:30:71.98:625,72,0	1/1:3,25:28:68.98:599,69,0	1/1:3,30:33:77.98:677,78,0	1/1:2,28:30:77.98:677,78,0	1/1:4,25:29:71.98:625,72,0	1/1:3,18:21:53.97:469,54,0	1/1:0,17:17:44.99:391,45,0	1/1:5,14:20:44.01:368,44,0	1/1:1,33:35:95.01:813,95,0	1/1:5,27:32:83.98:729,84,0	0/0:28,0:28:72.19:0,72,796	0/0:32,0:32:83.59:0,84,903	0/0:24,0:24:69.19:0,69,763	1/1:3,33:36:89.97:781,90,0	1/1:0,26:26:77.97:674,78,0	1/1:2,30:33:77.02:657,77,0	1/1:0,13:13:38.99:339,39,0
chr10	61716384	.	AAT	A	17664.03	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=-4.148;DP=763;FS=5.574;HRun=0;HaplotypeScore=124.1531;InbreedingCoeff=0.9329;MQ=65.35;MQ0=8;MQRankSum=-0.442;QD=29.20;ReadPosRankSum=2.737;VQSLOD=6.5596;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,20:30:50.72:631,51,0	1/1:1,12:13:36.12:458,36,0	0/0:7,0:7:3.01:0,3,30	0/0:21,0:18:2.85:0,3,70	1/1:2,28:30:78.08:969,78,0	1/1:2,21:22:57.18:726,57,0	1/1:1,16:17:38.79:496,39,0	0/0:42,0:42:99:0,99,1609	0/0:8,0:26:63.04:0,63,604	1/1:6,38:42:99:1336,105,0	1/1:6,20:26:47.59:592,48,0	1/1:4,19:23:48.15:611,48,0	1/1:3,40:42:99:1337,105,0	1/1:0,23:23:60.19:764,60,0	1/1:2,44:46:99:1413,111,0	1/1:3,41:44:99:1337,105,0	1/1:2,15:17:42.13:532,42,0	1/1:2,17:18:48.15:609,48,0	1/1:2,13:15:39.09:479,39,0	1/1:5,26:30:69.18:857,69,0	1/1:4,24:28:60.19:764,60,0	0/0:4,0:17:42.01:0,42,389	0/0:7,0:31:60.03:0,60,532	0/0:5,0:14:33.04:0,33,342	1/1:3,32:35:25.29:867,25,0	1/1:7,50:57:99:1816,144,0	1/1:4,23:27:57.18:726,57,0	1/1:2,9:11:27.09:344,27,0
chr10	61717120	.	TA	T	2417.77	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=11.567;DP=748;FS=6.720;HRun=8;HaplotypeScore=74.0016;InbreedingCoeff=0.9992;MQ=77.74;MQ0=0;MQRankSum=0.615;QD=22.81;ReadPosRankSum=2.478;VQSLOD=4.3515;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,117,1413	0/0:9,0:9:24.07:0,24,288	0/0:24,0:24:42.05:0,42,453	0/0:24,1:24:29.64:0,30,533	0/0:25,0:25:75.22:0,75,896	0/0:24,0:24:57.17:0,57,678	0/0:26,0:26:78.24:0,78,941	0/0:22,0:22:54.15:0,54,639	1/1:2,29:31:81.13:782,81,0	0/0:26,0:26:72.22:0,72,870	0/0:22,0:22:57.17:0,57,688	0/0:31,0:31:84.22:0,84,998	0/0:43,0:43:99:0,123,1453	0/0:31,0:31:90.26:0,90,1076	0/0:28,0:28:81.25:0,81,978	0/0:32,0:32:93.29:0,93,1123	0/0:32,0:32:90.28:0,90,1085	0/0:21,0:21:60.18:0,60,725	0/0:23,0:23:63.17:0,63,730	0/0:37,0:36:81.10:0,81,978	0/0:24,0:24:66.20:0,66,797	1/1:2,21:23:57.09:551,57,0	1/1:2,26:28:72:695,72,0	1/1:2,22:24:57.09:550,57,0	0/0:22,0:22:63.15:0,63,727	0/0:25,0:25:72.22:0,72,870	0/0:36,0:36:84.24:0,84,1002	0/0:12,0:12:36.11:0,36,434
chr10	61717530	.	AAAG	A	1283.56	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.876;DP=658;FS=1.451;HRun=0;HaplotypeScore=102.3417;InbreedingCoeff=0.9880;MQ=71.71;MQ0=5;MQRankSum=-4.558;QD=21.76;ReadPosRankSum=0.156;VQSLOD=3.1949;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:48,1:49:99:0,141,3079	0/0:13,0:13:39.13:0,39,808	0/0:27,0:17:43.13:0,43,685	0/0:40,0:24:42.60:0,43,663	0/0:29,0:29:78.25:0,78,1613	0/0:27,0:27:81.23:0,81,1664	0/0:20,0:20:51.16:0,51,1021	0/0:27,0:27:58.43:0,58,1137	0/0:18,0:18:42.13:0,42,825	0/0:18,0:18:51.17:0,51,1056	0/0:15,0:15:45.15:0,45,948	0/0:23,0:23:63.22:0,63,1358	0/0:22,0:22:57.17:0,57,1130	0/0:23,0:23:63.20:0,63,1289	0/0:18,0:18:45.15:0,45,926	0/0:27,0:27:75.25:0,75,1559	0/0:30,0:30:81.26:0,81,1616	0/0:25,0:25:69.23:0,69,1431	0/0:24,0:24:68.95:0,69,1307	0/0:25,0:25:69.17:0,69,1300	0/0:25,0:24:72.23:0,72,1518	1/1:3,16:19:24.08:379,24,0	1/1:3,17:20:30.03:429,30,0	1/1:3,17:20:39.13:618,39,0	0/0:25,0:25:63.21:0,63,1312	0/0:22,0:22:63.22:0,63,1351	0/0:23,0:23:63.20:0,63,1270	0/0:4,0:4:12.01:0,12,217
chr10	61718323	.	CA	C	4670.52	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=11.116;DP=744;FS=0.358;HRun=2;HaplotypeScore=77.4737;InbreedingCoeff=0.9840;MQ=83.62;MQ0=0;MQRankSum=-6.126;QD=35.93;ReadPosRankSum=2.584;VQSLOD=5.4200;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:56:99:0,169,2477	0/0:16,0:16:48.16:0,48,715	0/0:20,0:20:60.16:0,60,845	0/0:27,0:27:77.91:0,78,1016	0/0:23,0:23:69.19:0,69,1004	0/0:19,0:19:57.18:0,57,833	0/0:19,0:19:54.18:0,54,803	0/0:33,0:33:96.32:0,96,1421	1/1:0,32:32:93.30:1207,93,0	0/0:32,0:32:90.30:0,90,1329	0/0:24,0:24:66.21:0,66,970	0/0:18,0:18:54.17:0,54,788	0/0:34,0:34:99:0,102,1518	0/0:24,0:24:69.21:0,69,1004	0/0:29,0:29:87.19:0,87,1267	0/0:29,1:30:45.33:0,45,1175	0/0:30,0:30:90.25:0,90,1287	0/0:21,0:21:60.14:0,60,853	0/0:18,0:18:48.16:0,48,719	0/0:20,0:20:60.20:0,60,892	0/0:22,0:22:66.22:0,66,989	1/1:0,33:33:87.28:1129,87,0	1/1:0,26:26:63:816,63,0	1/1:0,39:39:99:1519,117,0	0/0:35,0:35:99:0,105,1512	0/0:30,0:30:90.28:0,90,1310	0/0:31,0:31:93.31:0,93,1380	0/0:3,0:3:9.03:0,9,135
chr10	61721182	.	CTCTCCCT	C	15132.90	PASS	AB=0.981;AC=43;AF=0.768;AN=56;BaseQRankSum=0.563;DP=565;FS=6.011;HRun=0;HaplotypeScore=146.5683;InbreedingCoeff=0.8350;MQ=55.11;MQ0=10;MQRankSum=-7.160;QD=32.83;ReadPosRankSum=4.146;VQSLOD=3.7746;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,16:19:28.64:793,29,0	1/1:2,3:5:5.97:109,6,0	0/0:50,0:14:17.18:0,17,765	0/1:50,0:21:11.20:11,0,605	1/1:6,14:20:36.12:737,36,0	1/1:6,25:30:60.21:1468,60,0	1/1:3,19:22:9.03:220,9,0	0/0:14,0:14:30.09:0,30,837	0/0:12,0:12:30.10:0,30,1044	1/1:2,28:30:87.29:1959,87,0	1/1:1,14:15:30.10:623,30,0	1/1:3,14:16:27.09:661,27,0	1/1:2,21:23:45.08:1100,45,0	1/1:3,12:15:27.09:640,27,0	1/1:3,24:26:39.13:955,39,0	1/1:4,16:20:23.86:587,24,0	1/1:7,13:20:6.02:147,6,0	1/1:4,12:17:18.26:472,18,0	1/1:3,11:14:27.06:427,27,0	1/1:2,20:22:48.16:997,48,0	1/1:9,13:23:12.47:342,12,0	0/0:6,0:6:15.05:0,15,563	0/0:11,0:10:21:0,21,687	0/0:10,0:10:21.07:0,21,793	1/1:1,16:17:21.07:514,21,0	1/1:2,22:24:60.21:1280,60,0	1/1:3,19:21:35.95:882,36,0	1/1:2,4:6:9.03:208,9,0
chr10	61721220	.	CTCCT	C	1105.58	PASS	AB=0.875;AC=11;AF=0.196;AN=56;BaseQRankSum=3.296;DP=586;FS=8.601;HRun=0;HaplotypeScore=163.3668;InbreedingCoeff=0.7498;MQ=49.78;MQ0=17;MQRankSum=0.208;QD=11.17;ReadPosRankSum=0.825;VQSLOD=2.5858;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:30.06:0,30,645	0/0:8,0:8:18.06:0,18,429	0/0:39,0:15:3.90:0,4,46	0/0:50,0:17:9.35:0,9,269	0/0:18,0:18:21.07:0,21,492	0/0:29,0:28:36.12:0,36,826	0/0:20,0:20:27.09:0,27,644	1/1:17,6:22:15.04:212,15,0	1/1:13,0:14:27.03:250,27,0	0/0:33,1:34:24.47:0,24,1349	0/0:12,0:12:18.06:0,18,416	0/0:22,0:21:33.11:0,33,728	0/0:23,0:23:24.08:0,24,568	0/0:20,0:20:42.14:0,42,1002	0/0:26,0:26:48.12:0,48,1052	0/0:16,0:16:33.11:0,33,781	0/0:13,0:13:21.03:0,21,450	0/0:18,0:19:5.53:0,6,353	0/0:19,0:16:28.30:0,28,579	0/0:17,0:17:24.08:0,24,548	0/0:23,0:23:24.08:0,24,544	1/1:4,8:12:18.06:287,18,0	1/1:3,6:8:8.84:143,9,0	1/1:6,13:19:9.76:320,10,0	0/1:18,3:20:62.41:62,0,612	0/0:25,1:26:6.42:0,6,1105	0/0:26,0:25:21.07:0,21,491	0/0:3,0:3:6.02:0,6,143
chr10	61721245	.	TC	T	56.29	PASS	AB=0.636;AC=1;AF=0.018;AN=56;BaseQRankSum=4.866;DP=556;FS=7.013;HRun=2;HaplotypeScore=100.5573;InbreedingCoeff=-0.0204;MQ=53.82;MQ0=13;MQRankSum=-2.016;QD=4.02;ReadPosRankSum=0.495;VQSLOD=0.2803;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:54.05:0,54,738	0/0:12,0:12:32.26:0,32,460	0/0:24,0:14:31.68:0,32,379	0/0:29,0:14:39.09:0,39,527	0/0:16,0:16:42.14:0,42,604	0/0:22,0:22:57.14:0,57,797	0/0:24,0:24:57.14:0,57,804	0/0:22,0:20:45.99:0,46,517	0/1:6,8:12:51.67:131,0,52	0/0:29,0:29:84.75:0,85,1226	0/0:14,0:14:36.05:0,36,491	0/0:23,0:23:54.18:0,54,786	0/0:15,0:15:39.10:0,39,528	0/0:18,0:18:51.17:0,51,753	0/0:28,0:28:75.15:0,75,1042	0/0:17,0:17:45.14:0,45,645	0/0:21,0:21:51.17:0,51,735	0/0:19,0:18:24.47:0,24,493	0/0:19,0:16:48.16:0,48,702	0/0:16,0:15:39.06:0,39,526	0/0:26,0:26:54.15:0,54,755	0/0:14,0:14:20.87:0,21,245	0/0:10,0:9:10.79:0,11,106	0/0:23,0:23:30.38:0,30,370	0/0:23,0:22:55.06:0,55,761	0/0:25,0:25:69.66:0,70,997	0/0:26,0:25:57.02:0,57,801	0/0:6,0:6:15.05:0,15,215
chr10	61721248	.	TTCCTTCC	T	400.33	PASS	AB=0.700;AC=1;AF=0.018;AN=56;BaseQRankSum=3.191;DP=555;FS=6.926;HRun=0;HaplotypeScore=151.3645;InbreedingCoeff=0.5245;MQ=56.52;MQ0=11;MQRankSum=-2.497;QD=28.59;ReadPosRankSum=0.708;VQSLOD=3.0209;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:54.18:0,54,1506	0/0:12,0:12:33.11:0,33,906	0/0:24,0:14:38.99:0,39,540	0/0:28,0:15:42.14:0,42,868	0/0:16,0:16:39:0,39,1010	0/0:20,0:20:54.18:0,54,1642	0/0:25,0:25:57.19:0,57,1558	0/0:20,0:18:50.57:0,51,561	0/1:8,6:12:1.91:475,0,2	0/0:29,0:29:84.20:0,84,2540	0/0:13,0:13:33.11:0,33,947	0/0:22,0:22:51.17:0,51,1519	0/0:14,0:14:36.12:0,36,1083	0/0:19,0:19:54.18:0,54,1864	0/0:26,0:26:69.23:0,69,2123	0/0:17,0:17:45.15:0,45,1475	0/0:22,0:22:54.18:0,54,1294	0/0:19,0:18:21.75:0,22,823	0/0:18,0:17:48.14:0,48,1231	0/0:17,0:16:39.05:0,39,1043	0/0:27,0:27:69.23:0,69,1561	0/0:12,0:13:29.84:0,30,297	0/0:10,0:9:15.43:0,15,157	0/0:24,0:24:44.75:0,45,473	0/0:23,0:22:54.05:0,54,1434	0/0:25,0:25:75.21:0,75,2261	0/0:29,0:28:63.13:0,63,1369	0/0:6,0:6:15.05:0,15,354
chr10	61721382	.	CTT	C	3148.14	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=11.044;DP=652;FS=2.006;HRun=5;HaplotypeScore=76.0405;InbreedingCoeff=0.9911;MQ=74.76;MQ0=1;MQRankSum=-0.450;QD=36.61;ReadPosRankSum=2.010;VQSLOD=3.2834;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:54.14:0,54,954	0/0:9,0:9:27.09:0,27,488	0/0:14,0:13:33:0,33,467	0/0:21,0:21:47.34:0,47,822	0/0:22,0:21:63.22:0,63,1124	0/0:37,0:37:99:0,108,1959	0/0:34,0:34:99:0,102,1810	0/0:23,0:23:69.24:0,69,1229	1/1:0,17:17:51.17:706,51,0	0/0:34,0:34:96.29:0,96,1689	0/0:14,0:14:36.12:0,36,633	0/0:27,0:27:78.25:0,78,1366	0/0:35,0:35:96.30:0,96,1631	0/0:21,0:21:63.22:0,63,1121	0/0:30,0:30:84.28:0,84,1490	0/0:22,0:22:66.20:0,66,1161	0/0:26,0:26:78.23:0,78,1356	0/0:19,0:19:51.16:0,51,895	0/0:20,0:20:54.18:0,54,966	0/0:28,0:28:81.26:0,81,1413	0/0:28,0:28:84.27:0,84,1456	1/1:0,21:20:60.20:840,60,0	1/1:0,15:15:39.13:546,39,0	1/1:1,32:33:87.29:1217,87,0	0/0:19,0:19:51.17:0,51,928	0/0:30,0:30:87.29:0,87,1507	0/0:28,0:27:78.27:0,78,1405	0/0:4,0:4:12.04:0,12,213
chr10	61723495	.	GT	G	10848.45	PASS	AB=0.550;AC=49;AF=0.875;AN=56;BaseQRankSum=-2.081;DP=555;FS=0.000;HRun=10;HaplotypeScore=61.8586;InbreedingCoeff=0.8689;MQ=70.40;MQ0=0;MQRankSum=-3.945;QD=21.40;ReadPosRankSum=3.940;VQSLOD=5.5559;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,21:22:59.98:520,60,0	0/1:2,9:11:3.19:204,0,3	0/0:19,1:19:10.77:0,11,301	0/0:11,0:10:23.97:0,24,218	1/1:1,17:18:44.98:391,45,0	1/1:3,17:20:47.99:417,48,0	1/1:2,12:14:29.99:260,30,0	1/1:7,25:32:67.13:609,67,0	0/0:17,0:17:48.12:0,48,525	1/1:2,19:21:54.43:464,54,0	1/1:2,20:22:59.98:521,60,0	1/1:1,20:21:53.99:468,54,0	1/1:2,19:21:53.99:469,54,0	1/1:2,27:29:74.98:651,75,0	1/1:6,17:23:44.98:391,45,0	1/1:3,14:17:41.96:365,42,0	1/1:2,14:16:41.99:365,42,0	1/1:3,9:12:26.98:234,27,0	1/1:5,21:26:29.55:487,30,0	1/1:5,25:30:65.94:573,66,0	1/1:1,13:14:38.99:339,39,0	1/1:2,18:20:50.96:443,51,0	1/1:1,16:17:44.99:390,45,0	1/1:0,9:9:26.99:234,27,0	1/1:0,16:16:41.99:365,42,0	1/1:4,25:29:71.96:621,72,0	1/1:2,26:28:74.98:651,75,0	1/1:0,19:19:47.99:417,48,0
chr10	61726147	.	TTA	T	5433.23	PASS	AC=44;AF=0.917;AN=48;BaseQRankSum=7.077;DP=259;FS=0.000;HRun=0;HaplotypeScore=36.3753;InbreedingCoeff=0.6671;MQ=70.01;MQ0=1;MQRankSum=-2.012;QD=26.63;ReadPosRankSum=5.645;VQSLOD=5.2564;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,10:17:27.08:335,27,0	1/1:1,3:4:9.03:112,9,0	./.	0/0:7,0:4:5.36:0,5,31	1/1:2,6:8:18.01:206,18,0	1/1:1,10:11:30.09:372,30,0	./.	0/0:39,0:39:75.24:0,75,1185	1/1:0,7:7:21.07:260,21,0	1/1:1,7:8:21.05:247,21,0	1/1:2,2:4:6.02:74,6,0	1/1:5,11:16:30.09:372,30,0	1/1:1,9:10:27.08:335,27,0	1/1:2,3:6:11.87:126,12,0	1/1:3,5:8:15.05:186,15,0	1/1:1,6:7:18.06:223,18,0	1/1:4,17:21:45.14:558,45,0	1/1:1,11:12:30.09:372,30,0	1/1:3,12:15:38.89:440,39,0	1/1:3,5:8:15.05:186,15,0	1/1:1,1:2:3.01:37,3,0	./.	1/1:5,1:6:3.01:37,3,0	./.	1/1:1,8:9:24.08:298,24,0	1/1:5,8:13:24.06:287,24,0	1/1:0,7:7:21.07:260,21,0	1/1:0,4:4:9.03:112,9,0
chr10	61726173	.	GAAGTGTTGTT	G	1530.89	PASS	AC=6;AF=0.111;AN=54;BaseQRankSum=3.514;DP=319;FS=14.396;HRun=0;HaplotypeScore=114.0100;InbreedingCoeff=0.9041;MQ=75.24;MQ0=0;MQRankSum=-6.873;QD=85.05;ReadPosRankSum=0.134;VQSLOD=2.8762;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:45.15:0,45,2128	0/0:4,0:4:12.04:0,12,637	0/0:8,0:8:24.05:0,24,1069	0/0:5,0:6:18.06:0,18,713	0/0:9,0:9:24.08:0,24,1252	0/0:13,0:13:39.13:0,39,2082	0/0:7,0:7:21.07:0,21,1092	0/0:47,0:47:99:0,138,6780	1/1:0,11:11:30.10:963,30,0	0/0:11,0:11:33.11:0,33,1622	0/0:6,0:6:15.05:0,15,801	0/0:14,0:14:42.14:0,42,2240	0/0:13,0:13:39.13:0,39,1953	0/0:8,0:8:24.08:0,24,1254	0/0:8,0:8:21.07:0,21,1121	0/0:8,0:8:24.08:0,24,1281	0/0:23,0:23:66.19:0,66,2905	0/0:14,0:14:42.14:0,42,2056	0/0:19,0:19:54.19:0,54,2774	0/0:9,0:9:27.09:0,27,1414	0/0:2,0:2:6.02:0,6,320	1/1:0,3:3:9.03:300,9,0	1/1:0,4:4:12.04:400,12,0	./.	0/0:11,0:11:33.11:0,33,1757	0/0:21,0:21:60.21:0,60,3163	0/0:13,0:13:39.13:0,39,1969	0/0:7,0:7:18.06:0,18,936
chr10	61726765	.	CATA	C	21037.92	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=14.340;DP=699;FS=0.000;HRun=0;HaplotypeScore=106.2476;InbreedingCoeff=0.9988;MQ=78.61;MQ0=0;MQRankSum=-5.285;QD=40.38;ReadPosRankSum=5.319;VQSLOD=5.8007;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,34:36:78.27:1298,78,0	1/1:0,11:11:24.08:391,24,0	0/0:23,0:23:56.35:0,56,1222	0/0:11,0:11:33.02:0,33,619	1/1:0,39:39:93.08:1427,93,0	1/1:5,19:24:51.17:839,51,0	1/1:1,9:10:24.08:399,24,0	0/0:38,0:38:99:0,111,2396	0/0:20,0:20:60.20:0,60,1290	1/1:4,34:38:99:1538,105,0	1/1:3,22:25:63.13:965,63,0	1/1:0,20:20:54.18:898,54,0	1/1:0,24:24:69.24:1138,69,0	1/1:0,27:27:72.25:1188,72,0	1/1:1,19:20:57.19:949,57,0	1/1:1,20:21:54.18:899,54,0	1/1:0,21:21:45.15:749,45,0	1/1:0,17:17:36.12:599,36,0	1/1:3,22:25:65.11:940,65,0	1/1:0,23:23:66.12:1016,66,0	1/1:0,14:14:39.13:639,39,0	0/0:34,0:34:99:0,99,2062	0/0:30,0:30:87.27:0,87,1818	0/0:22,0:22:63.21:0,63,1370	1/1:1,27:28:72.25:1178,72,0	1/1:2,41:43:99:2001,123,0	1/1:1,40:41:96.33:1598,96,0	1/1:0,14:14:24.08:389,24,0
chr10	61727447	.	T	TA	1010.22	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-5.500;DP=628;FS=0.000;HRun=5;HaplotypeScore=63.7000;InbreedingCoeff=0.9952;MQ=92.24;MQ0=0;MQRankSum=-4.722;QD=33.67;ReadPosRankSum=1.199;VQSLOD=4.0809;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,105,1128	0/0:9,0:9:24.06:0,24,258	0/0:22,0:22:54.58:0,55,565	0/0:30,0:30:62.50:0,62,639	0/0:23,0:23:69.17:0,69,741	0/0:20,0:20:57.14:0,57,613	0/0:23,0:23:57.10:0,57,596	0/0:41,0:41:99:0,110,1185	1/1:2,28:30:84.27:1105,84,0	0/0:28,0:28:72.18:0,72,774	0/0:12,0:12:36.08:0,36,379	0/0:30,0:30:87.20:0,87,926	0/0:24,0:24:69.13:0,69,723	0/0:25,0:25:72.18:0,72,774	0/0:16,0:16:48.11:0,48,508	0/0:17,0:17:45.11:0,45,484	0/0:31,0:31:87.22:0,87,935	0/0:22,0:22:54.13:0,54,580	0/0:10,0:10:24.06:0,24,258	0/0:16,0:16:45.11:0,45,484	0/0:30,0:30:81.20:0,81,870	0/0:13,0:13:33.08:0,33,354	0/0:16,0:16:39.10:0,39,419	0/0:18,0:18:54.14:0,54,580	0/0:20,0:20:60.15:0,60,644	0/0:26,0:26:69.16:0,69,734	0/0:25,0:25:69.17:0,69,741	0/0:11,0:11:33.08:0,33,354
chr10	61728006	.	ATTGT	A	219.85	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=6.151;DP=595;FS=0.826;HRun=0;HaplotypeScore=105.0399;InbreedingCoeff=0.8507;MQ=70.27;MQ0=18;MQRankSum=-3.277;QD=2.78;ReadPosRankSum=-3.240;VQSLOD=0.6040;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:75.96:0,76,605	0/0:8,0:8:23.96:0,24,198	0/0:35,0:24:64.92:0,65,670	0/0:39,0:27:54.31:0,54,605	0/0:25,0:25:62.86:0,63,513	0/0:22,0:22:53.83:0,54,438	0/0:25,0:24:65.80:0,66,545	0/0:21,0:21:53.59:0,54,439	0/0:13,0:13:38.93:0,39,359	0/0:18,0:18:43.21:0,43,445	0/0:17,0:16:41.94:0,42,348	0/0:19,0:19:5.75:0,6,255	0/0:14,0:13:32.74:0,33,260	0/0:7,0:7:17.93:0,18,145	0/0:21,0:21:41.29:0,41,404	0/0:23,0:23:42.14:0,42,534	0/0:32,0:30:80.76:0,81,641	0/0:24,0:23:59.64:0,60,500	0/0:24,0:24:47.63:0,48,502	0/0:8,0:8:20.59:0,21,164	0/0:37,0:33:89.68:0,90,724	1/1:0,22:22:2.92:59,3,0	1/1:6,12:18:15.07:123,15,0	1/1:1,37:38:9.03:161,9,0	0/0:15,0:15:41.97:0,42,358	0/0:15,0:15:44.97:0,45,408	0/0:20,0:20:42.85:0,43,415	0/0:4,0:4:11.99:0,12,101
chr10	61728007	.	TTGTGTGTG	T	961.28	PASS	AB=0.972;AC=25;AF=0.625;AN=40;BaseQRankSum=0.438;DP=621;FS=0.000;HRun=0;HaplotypeScore=144.4817;InbreedingCoeff=0.1387;MQ=68.18;MQ0=20;MQRankSum=-1.532;QD=2.60;ReadPosRankSum=0.985;VQSLOD=2.0198;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:32,0:32:0:0,0,0	0/0:9,0:9:2.68:0,3,11	./.	./.	0/1:26,0:26:19.96:36,0,20	1/1:21,0:21:3.01:41,3,0	./.	./.	0/0:14,0:14:4.57:0,5,57	1/1:19,2:21:3.43:110,3,0	./.	1/1:15,4:20:12.04:276,12,0	1/1:13,2:14:3.01:51,3,0	./.	1/1:22,1:23:3.90:75,4,0	0/1:21,3:25:80.24:80,0,112	0/1:34,0:32:32.51:64,0,33	0/0:25,0:24:3.97:0,4,20	1/1:24,3:27:8.99:163,9,0	1/1:8,0:8:3.01:60,3,0	1/1:41,0:36:3.01:47,3,0	0/0:22,0:22:2.87:0,3,19	1/1:18,0:18:0.23:1,0,0	0/1:39,0:38:4.81:5,0,27	./.	0/0:16,0:15:3.01:0,3,44	1/1:18,2:20:3.01:73,3,0	./.
chr10	61728394	.	AAGGG	A	1194.23	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=3.081;DP=431;FS=7.276;HRun=0;HaplotypeScore=86.7041;InbreedingCoeff=0.9330;MQ=69.05;MQ0=3;MQRankSum=-3.914;QD=29.13;ReadPosRankSum=-1.395;VQSLOD=2.7997;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:23.58:0,24,566	0/0:5,0:5:9.03:0,9,225	0/0:28,0:18:17.70:0,18,252	0/0:33,0:21:24.94:0,25,593	0/0:12,0:12:27.05:0,27,496	0/0:18,0:18:42.13:0,42,986	0/0:20,0:20:42.09:0,42,796	0/0:12,0:12:17.93:0,18,372	0/0:11,0:11:24.07:0,24,550	0/0:18,0:18:30.09:0,30,587	0/0:9,0:9:24.07:0,24,547	0/0:13,0:13:27.08:0,27,623	0/0:21,0:21:51.14:0,51,1097	0/0:13,0:13:23.97:0,24,487	0/0:15,0:15:42.09:0,42,804	0/0:14,0:14:29.65:0,30,748	0/0:15,0:15:36.08:0,36,747	0/0:9,0:9:9.03:0,9,225	0/0:8,0:8:12.03:0,12,251	0/0:16,0:16:30.06:0,30,501	0/0:16,0:16:33.11:0,33,757	1/1:5,9:14:36.08:577,36,0	1/1:10,7:17:33.10:513,33,0	1/1:7,3:10:17.99:245,18,0	0/0:16,0:16:24.06:0,24,455	0/0:21,0:21:54.16:0,54,1181	0/0:21,0:21:33.18:0,33,1218	0/0:7,0:7:18.06:0,18,449
chr10	61728419	.	AG	A	5802.19	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=-9.104;DP=426;FS=0.515;HRun=9;HaplotypeScore=59.5231;InbreedingCoeff=0.9613;MQ=79.07;MQ0=6;MQRankSum=0.868;QD=20.95;ReadPosRankSum=3.795;VQSLOD=5.5042;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,9:14:15.29:160,15,0	1/1:2,2:4:6:55,6,0	0/0:33,0:16:29.70:0,30,277	0/0:48,0:27:47.04:0,47,434	1/1:2,10:12:29.79:274,30,0	1/1:3,12:15:27.01:247,27,0	1/1:4,18:22:48.01:439,48,0	0/0:18,0:18:30.05:0,30,331	0/0:2,0:9:17.04:0,17,87	1/1:2,8:10:24.01:220,24,0	1/1:3,11:14:30.01:274,30,0	1/1:0,11:11:30.02:275,30,0	1/1:3,18:21:54.03:494,54,0	1/1:3,6:9:15:137,15,0	1/1:3,16:19:51.03:466,51,0	1/1:2,11:13:27.01:247,27,0	1/1:1,14:15:42.02:384,42,0	1/1:3,7:10:20.25:191,20,0	1/1:4,9:13:26.99:242,27,0	1/1:0,9:9:27.01:247,27,0	1/1:0,14:14:33.02:302,33,0	0/0:7,0:19:32.64:0,33,174	0/0:3,0:10:13.61:0,14,64	0/0:1,0:11:25.51:0,26,133	1/1:0,12:12:33.02:302,33,0	1/1:3,14:17:39:351,39,0	1/1:2,14:16:42.02:384,42,0	1/1:2,5:7:12:110,12,0
chr10	61728773	.	G	GA	2149.96	PASS	AB=0.917;AC=9;AF=0.161;AN=56;BaseQRankSum=-8.414;DP=790;FS=5.502;HRun=9;HaplotypeScore=76.7774;InbreedingCoeff=0.6514;MQ=72.33;MQ0=0;MQRankSum=0.111;QD=18.07;ReadPosRankSum=0.911;VQSLOD=3.7849;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:58,2:60:98.67:0,99,1314	0/1:4,1:5:21.18:21,0,66	0/1:14,0:12:7.38:7,0,99	0/0:14,0:14:26.89:0,27,204	0/0:29,0:29:71.93:0,72,618	0/0:29,0:29:74.97:0,75,651	0/0:31,1:32:50.78:0,51,665	0/0:33,1:34:74.95:0,75,651	0/0:24,0:24:71.94:0,72,613	0/0:43,0:43:99:0,105,911	0/0:28,1:29:44.80:0,45,618	0/0:30,0:30:83.98:0,84,729	0/0:20,0:20:59.99:0,60,521	0/0:30,0:30:83.92:0,84,719	0/0:27,0:27:74.98:0,75,651	0/0:32,0:32:89.98:0,90,781	0/0:39,0:39:99:0,105,911	0/0:17,0:17:41.97:0,42,364	0/0:25,1:26:29.78:0,30,487	0/0:24,0:24:62.97:0,63,547	0/0:34,0:34:83.96:0,84,729	1/1:2,22:24:34.11:605,34,0	1/1:4,18:22:51.61:565,52,0	1/1:5,38:43:79.23:1102,79,0	0/0:23,0:23:59.93:0,60,516	0/0:32,0:33:89:0,89,761	0/0:40,0:42:65.80:0,66,851	0/1:10,1:11:3.19:3,0,204
chr10	61729745	.	C	CA	4010.44	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-11.719;DP=744;FS=3.760;HRun=1;HaplotypeScore=68.6461;InbreedingCoeff=0.9998;MQ=83.95;MQ0=0;MQRankSum=-1.448;QD=44.56;ReadPosRankSum=1.147;VQSLOD=3.4786;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,123,1684	0/0:16,0:16:48.15:0,48,655	0/0:23,0:23:56.51:0,57,744	0/0:21,0:21:50.96:0,51,684	0/0:31,0:31:93.31:0,93,1301	0/0:27,0:27:78.23:0,78,1051	0/0:33,0:33:99:0,99,1364	0/0:31,0:31:93.31:0,93,1299	1/1:1,24:26:72.24:1133,72,0	0/0:33,0:33:99:0,99,1352	0/0:21,0:21:60.20:0,60,838	0/0:33,0:33:99:0,99,1385	0/0:29,0:29:87.27:0,87,1196	0/0:32,0:32:96.32:0,96,1343	0/0:29,0:29:87.28:0,87,1200	0/0:28,1:29:39.30:0,39,1107	0/0:25,0:25:69.23:0,69,965	0/0:25,0:25:72.22:0,72,984	0/0:19,0:19:57.19:0,57,795	0/0:16,0:16:45.13:0,45,596	0/0:59,0:59:99:0,175,2416	1/1:0,16:16:48.16:767,48,0	1/1:1,11:12:30.10:480,30,0	1/1:0,36:36:99:1631,102,0	0/0:17,0:17:51.17:0,51,711	0/0:23,0:23:66.22:0,66,919	0/0:24,0:24:63.21:0,63,881	0/0:17,0:17:51.14:0,51,678
chr10	61730541	.	AGGAAGAGGAGGAAGAGGAG	A	1079.53	PASS	AB=0.821;AC=8;AF=0.160;AN=50;BaseQRankSum=-0.004;DP=264;FS=0.000;HRun=0;HaplotypeScore=107.3652;InbreedingCoeff=0.3783;MQ=37.65;MQ0=35;MQRankSum=-1.577;QD=28.41;ReadPosRankSum=0.213;VQSLOD=2.3231;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:12:16.91:0,17,123	0/0:2,0:2:3.01:0,3,84	./.	./.	0/0:5,0:4:9.03:0,9,121	0/0:12,0:12:2.50:0,2,9	0/0:13,0:11:5.50:0,6,43	0/0:17,0:12:27.09:0,27,489	0/1:4,5:7:2.82:754,0,3	0/0:7,0:5:9.74:0,10,137	0/0:6,0:6:9.01:0,9,102	0/1:12,0:9:25.07:25,0,237	0/0:12,0:9:15.63:0,16,61	0/0:10,0:10:4.98:0,5,18	0/0:12,0:11:15.88:0,16,102	0/0:7,0:6:5.17:0,5,20	0/0:14,0:13:2.96:0,3,113	0/0:5,0:3:3.01:0,3,65	0/0:14,0:6:12.55:0,13,127	0/0:8,0:6:8.49:0,8,72	0/0:20,0:19:3.01:0,3,34	1/1:3,2:4:8.24:128,8,0	1/1:1,1:2:3.01:46,3,0	1/1:8,2:8:14.33:254,14,0	0/0:13,0:11:20.65:0,21,248	0/0:11,0:10:16.60:0,17,269	./.	0/0:2,0:2:3.01:0,3,65
chr10	61730542	.	GGAAGAGGAGGAA	G	6262.68	PASS	AB=1.000;AC=49;AF=0.980;AN=50;BaseQRankSum=2.671;DP=265;FS=0.000;HRun=0;HaplotypeScore=70.2311;InbreedingCoeff=-0.0856;MQ=37.73;MQ0=36;MQRankSum=-1.585;QD=25.77;ReadPosRankSum=0.968;VQSLOD=3.3419;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,11:12:15.94:520,16,0	1/1:2,0:2:3.01:38,3,0	./.	./.	1/1:1,4:4:5.95:105,6,0	1/1:0,12:12:3.01:113,3,0	1/1:1,12:11:6.02:202,6,0	0/1:18,0:13:8.44:28,0,8	1/1:9,0:7:20.65:443,21,0	1/1:3,4:5:10.28:212,10,0	1/1:0,6:6:6.02:126,6,0	1/1:10,2:9:23.93:466,24,0	1/1:3,9:9:17.90:671,18,0	1/1:0,10:10:6.49:228,6,0	1/1:1,11:11:18.06:627,18,0	1/1:1,6:6:6.02:225,6,0	1/1:2,13:13:15.05:420,15,0	1/1:5,0:3:3.01:51,3,0	1/1:11,2:5:12.04:310,12,0	1/1:3,5:6:8.92:76,9,0	1/1:1,19:19:3.01:89,3,0	1/1:5,0:4:8.92:86,9,0	1/1:2,0:2:2.88:15,3,0	1/1:10,0:8:17.67:160,18,0	1/1:1,13:11:21.07:571,21,0	1/1:1,10:10:23.64:432,24,0	./.	1/1:2,0:2:3.01:51,3,0
chr10	61730551	.	GGAA	G	2771.42	PASS	AC=52;AF=0.963;AN=54;BaseQRankSum=-0.797;DP=286;FS=9.055;HRun=0;HaplotypeScore=65.3657;InbreedingCoeff=0.1583;MQ=41.98;MQ0=39;MQRankSum=-1.959;QD=10.15;ReadPosRankSum=2.539;VQSLOD=2.0753;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:12:3.98:132,4,0	1/1:2,0:2:2.96:19,3,0	1/1:14,0:1:2.99:23,3,0	0/0:12,0:3:4.78:0,5,18	1/1:6,0:4:5.95:66,6,0	1/1:13,0:12:3:29,3,0	1/1:13,0:11:6.02:78,6,0	1/1:21,0:17:21.63:214,22,0	1/1:11,0:10:23.23:149,23,0	1/1:7,0:4:10.27:112,10,0	1/1:6,0:6:6.02:86,6,0	1/1:15,0:12:32.73:320,33,0	1/1:10,0:9:17.89:165,18,0	1/1:10,0:10:5.90:58,6,0	1/1:11,0:11:18.04:212,18,0	1/1:6,0:6:6.01:58,6,0	1/1:15,0:13:14.99:178,15,0	1/1:1,4:3:3.01:51,3,0	1/1:12,0:6:0.64:105,1,0	1/1:8,0:6:5.97:57,6,0	1/1:20,0:19:3.01:49,3,0	1/1:9,0:9:20.53:130,21,0	1/1:5,0:5:11.61:66,12,0	1/1:12,0:11:15.94:94,16,0	1/1:15,0:11:20.87:207,21,0	1/1:11,0:10:19.78:153,20,0	./.	1/1:0,2:2:3.01:51,3,0
chr10	61730554	.	AGAG	A	2054.44	PASS	AB=1.000;AC=47;AF=0.870;AN=54;BaseQRankSum=1.856;DP=288;FS=9.210;HRun=0;HaplotypeScore=70.0815;InbreedingCoeff=0.0444;MQ=43.47;MQ0=33;MQRankSum=-3.682;QD=7.47;ReadPosRankSum=4.497;VQSLOD=1.0592;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:12:8.43:55,8,0	./.	1/1:13,0:1:3:29,3,0	0/0:11,0:4:5.93:0,6,68	0/1:5,0:4:11.98:25,0,12	1/1:13,0:12:2.74:12,3,0	0/1:14,0:12:17.20:35,0,17	1/1:14,10:19:29.81:342,30,0	1/1:13,0:12:26.99:278,27,0	1/1:6,0:4:3.98:34,4,0	0/1:6,0:6:9.01:42,0,9	1/1:14,0:12:19.19:125,19,0	1/1:10,0:9:15.64:69,16,0	1/1:10,0:10:5.49:25,5,0	1/1:11,0:11:16.99:116,17,0	1/1:6,0:6:5.49:24,5,0	1/1:15,0:13:11.86:86,12,0	0/1:6,0:4:19.01:19,0,22	1/1:9,0:6:5.39:22,5,0	1/1:8,0:6:2.98:21,3,0	1/1:21,0:19:3.01:31,3,0	1/1:9,0:9:18.02:223,18,0	1/1:5,0:5:12.04:160,12,0	1/1:14,0:13:26.85:278,27,0	1/1:15,0:11:12.33:85,12,0	0/1:10,0:10:3.85:15,0,4	1/1:2,0:2:0.47:1,0,0	1/1:2,0:2:3:26,3,0
chr10	61730556	.	AGG	A	349.98	PASS	AB=0.800;AC=10;AF=0.179;AN=56;BaseQRankSum=2.079;DP=292;FS=1.038;HRun=2;HaplotypeScore=74.8025;InbreedingCoeff=0.3821;MQ=44.26;MQ0=30;MQRankSum=-0.734;QD=5.07;ReadPosRankSum=1.541;VQSLOD=-0.3881;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:14,0:12:14.98:15,0,36	0/0:2,0:2:3.01:0,3,35	0/0:12,0:1:1.55:0,2,4	0/0:9,0:5:11.78:0,12,122	0/0:6,0:5:11.06:0,11,107	1/1:13,0:12:0.47:1,0,0	0/0:14,0:12:4.66:0,5,52	0/0:24,0:19:19.85:0,20,232	1/1:11,3:13:27.54:155,28,0	0/0:6,0:4:6.85:0,7,43	0/0:6,0:6:7.75:0,8,62	0/0:13,0:12:13.62:0,14,162	0/0:11,0:10:2.55:0,3,29	0/0:11,0:11:2.23:0,2,21	0/0:11,0:11:1.88:0,2,4	0/0:6,0:6:0.67:0,1,1	0/0:15,0:13:6.63:0,7,35	0/0:6,0:4:5.68:0,6,37	0/0:9,0:6:12.98:0,13,144	0/0:9,0:7:8.91:0,9,78	0/0:23,0:21:4.77:0,5,24	0/1:3,6:9:25.67:96,0,26	1/1:2,3:5:11.90:98,12,0	1/1:11,3:13:15.94:124,16,0	0/0:15,0:11:15.28:0,15,99	0/0:10,0:10:17.33:0,17,177	0/0:2,0:2:3:0,3,26	0/0:2,0:2:2.68:0,3,11
chr10	61730559	.	AG	A	226.01	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=2.454;DP=318;FS=7.000;HRun=2;HaplotypeScore=76.4238;InbreedingCoeff=0.6915;MQ=47.35;MQ0=30;MQRankSum=-1.143;QD=5.02;ReadPosRankSum=1.309;VQSLOD=0.5310;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:15:25.05:0,25,203	0/0:1,0:1:3.01:0,3,40	0/0:13,0:2:5.83:0,6,39	0/0:13,0:6:17.96:0,18,203	0/0:6,0:5:11.77:0,12,142	0/0:15,0:14:8.39:0,8,89	0/0:15,0:14:14.15:0,14,145	0/0:27,0:21:39.82:0,40,361	1/1:12,3:14:25.33:139,25,0	0/0:6,0:4:8.45:0,8,64	0/0:6,0:6:8.74:0,9,79	0/0:15,0:14:37.60:0,38,329	0/0:11,0:10:17.48:0,17,101	0/0:11,0:11:7.75:0,8,60	0/0:12,0:12:17.61:0,18,78	0/0:9,0:9:10.94:0,11,79	0/0:16,0:14:16.38:0,16,103	0/0:8,0:6:11.94:0,12,124	0/0:9,0:6:17.22:0,17,166	0/0:9,0:7:9:0,9,108	0/0:24,0:22:11.70:0,12,97	1/1:3,6:9:10.17:93,10,0	1/1:3,3:6:11.66:61,12,0	1/1:12,3:14:7.92:78,8,0	0/0:15,0:11:22.89:0,23,189	0/0:11,0:11:23.49:0,23,257	0/0:2,0:2:3.01:0,3,40	0/0:2,0:2:2.92:0,3,17
chr10	61730656	.	CCACA	C	2589.92	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=9.382;DP=684;FS=4.569;HRun=0;HaplotypeScore=113.4022;InbreedingCoeff=0.9960;MQ=88.02;MQ0=1;MQRankSum=-0.960;QD=34.08;ReadPosRankSum=4.662;VQSLOD=3.6553;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,123,3276	0/0:10,0:10:27.08:0,27,625	0/0:24,0:24:66.22:0,66,1706	0/0:33,0:33:96.19:0,96,2379	0/0:18,0:18:48.16:0,48,1297	0/0:25,0:25:72.25:0,72,1868	0/0:30,0:30:87.27:0,87,2265	0/0:27,0:27:75.26:0,75,1897	1/1:2,13:14:27.09:519,27,0	0/0:28,0:28:81.28:0,81,2117	0/0:8,0:8:21.07:0,21,572	0/0:20,0:20:57.20:0,57,1524	0/0:22,0:22:66.23:0,66,1791	0/0:20,0:20:57.20:0,57,1449	0/0:20,0:19:57.18:0,57,1501	0/0:20,0:19:54.19:0,54,1446	0/0:38,0:38:99:0,111,2979	0/0:30,0:30:84.29:0,84,2245	0/0:26,0:26:75.26:0,75,2000	0/0:8,0:8:24.08:0,24,624	0/0:74,0:73:99:0,211,5555	1/1:0,13:12:21.03:369,21,0	1/1:1,11:12:24.08:465,24,0	1/1:1,35:36:72.72:1396,73,0	0/0:21,0:20:60.21:0,60,1615	0/0:27,0:27:72.25:0,72,1884	0/0:15,0:15:45.15:0,45,1202	0/0:21,0:21:60.21:0,60,1559
chr10	61741880	.	CTGTG	C	730.27	PASS	AB=0.971;AC=28;AF=0.609;AN=46;BaseQRankSum=0.587;DP=603;FS=0.961;HRun=0;HaplotypeScore=106.8616;InbreedingCoeff=0.2704;MQ=61.75;MQ0=18;MQRankSum=0.782;QD=2.00;ReadPosRankSum=1.577;VQSLOD=2.0842;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:31,0:29:25.30:44,0,25	0/1:12,0:13:13.96:22,0,14	./.	./.	./.	1/1:20,0:19:8.48:81,8,0	0/0:23,0:21:2.30:0,2,16	0/0:41,0:41:1.25:0,1,3	1/1:10,0:17:2.79:28,3,0	0/0:23,0:22:3.01:0,3,38	./.	1/1:27,0:27:10.17:87,10,0	0/0:15,0:15:2.53:0,3,93	1/1:16,0:17:10.53:121,11,0	1/1:20,0:19:11.12:146,11,0	1/1:21,0:21:8.94:48,9,0	1/1:28,0:28:5.32:39,5,0	1/1:17,0:17:8.31:94,8,0	1/1:22,0:19:7.29:29,7,0	1/1:15,0:15:2.98:38,3,0	1/1:41,0:39:6.21:46,6,0	0/1:14,0:12:4.93:5,0,185	0/0:11,0:15:8.61:0,9,99	0/1:39,1:36:14.29:14,0,439	1/1:14,8:22:3.47:29,3,0	0/0:13,0:13:2.48:0,2,50	0/0:13,0:13:4.82:0,5,38	./.
chr10	61746016	.	A	AT	13814.02	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=16.071;DP=628;FS=3.555;HRun=0;HaplotypeScore=132.7262;InbreedingCoeff=0.9981;MQ=85.17;MQ0=0;MQRankSum=-7.338;QD=28.25;ReadPosRankSum=6.374;VQSLOD=4.7376;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,37:42:95.21:1088,95,0	1/1:2,6:8:18:178,18,0	0/0:23,0:23:54.82:0,55,838	0/0:26,0:26:77.36:0,77,962	1/1:1,21:22:60.10:609,60,0	1/1:2,20:22:44.62:622,45,0	1/1:5,23:28:75.13:783,75,0	0/0:33,0:33:93.27:0,93,1239	1/1:0,26:26:75.17:800,75,0	1/1:2,24:26:72.16:783,72,0	1/1:0,18:18:48.05:484,48,0	1/1:4,19:24:57.14:616,57,0	1/1:0,13:13:36.05:362,36,0	1/1:2,26:28:61.75:748,62,0	1/1:2,16:18:50.85:520,51,0	1/1:3,21:24:56.50:730,57,0	1/1:4,22:26:48.08:662,48,0	1/1:1,19:20:54.04:531,54,0	1/1:0,15:15:45.11:489,45,0	1/1:1,24:25:72.13:744,72,0	1/1:3,30:33:93.17:997,93,0	0/0:17,0:17:51.17:0,51,713	0/0:16,0:16:48.12:0,48,607	0/0:24,0:24:72.23:0,72,989	1/1:1,14:15:45.06:451,45,0	1/1:1,21:22:66.15:724,66,0	1/1:5,18:22:37.01:608,37,0	1/1:0,11:11:27.06:285,27,0
chr10	61746017	.	A	AT	14041.85	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=15.971;DP=640;FS=3.090;HRun=0;HaplotypeScore=137.2711;InbreedingCoeff=0.9980;MQ=84.68;MQ0=0;MQRankSum=-9.178;QD=28.08;ReadPosRankSum=5.042;VQSLOD=4.7666;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,37:42:99:1115,111,0	1/1:3,6:9:17.63:169,18,0	0/0:24,0:24:58.89:0,59,860	0/0:26,0:26:74.16:0,74,933	1/1:2,21:23:63.12:648,63,0	1/1:2,20:22:63.07:639,63,0	1/1:7,23:30:87.09:880,87,0	0/0:31,0:31:93.28:0,93,1243	1/1:0,26:26:75.17:801,75,0	1/1:2,24:26:75.16:811,75,0	1/1:1,18:19:48.06:487,48,0	1/1:5,19:25:63.10:653,63,0	1/1:1,13:14:36.05:362,36,0	1/1:2,26:28:78.10:792,78,0	1/1:3,16:19:53.95:557,54,0	1/1:2,21:23:66.14:701,66,0	1/1:4,22:26:63.09:642,63,0	1/1:0,19:19:54.06:534,54,0	1/1:2,15:17:51.12:549,51,0	1/1:0,24:24:69.14:723,69,0	1/1:4,30:34:87.17:912,87,0	0/0:18,0:18:51.17:0,51,712	0/0:17,0:17:45.11:0,45,580	0/0:24,0:24:72.19:0,72,967	1/1:3,14:17:48.08:495,48,0	1/1:1,21:22:66.10:699,66,0	1/1:6,18:23:59.47:589,59,0	1/1:0,11:11:27.06:285,27,0
chr10	61746122	.	AAC	A	933.89	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.172;DP=713;FS=2.664;HRun=0;HaplotypeScore=81.2611;InbreedingCoeff=0.9999;MQ=84.21;MQ0=0;MQRankSum=-0.213;QD=31.13;ReadPosRankSum=-2.570;VQSLOD=4.8690;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,108,1874	0/0:18,0:18:51.17:0,51,891	0/0:29,0:29:78.25:0,78,1300	0/0:21,0:21:60.20:0,60,1006	0/0:32,0:32:87.30:0,87,1527	0/0:25,0:25:72.25:0,72,1266	0/0:22,0:22:66.23:0,66,1170	1/1:6,24:30:75.25:1029,75,0	0/0:25,0:25:72.23:0,72,1240	0/0:34,0:34:96.31:0,96,1663	0/0:20,0:20:57.20:0,57,1006	0/0:24,0:24:69.24:0,69,1224	0/0:15,0:15:45.14:0,45,767	0/0:23,0:23:69.24:0,69,1215	0/0:23,0:23:69.24:0,69,1224	0/0:34,0:34:99:0,99,1726	0/0:22,0:22:60.21:0,60,1064	0/0:18,0:18:51.17:0,51,904	0/0:33,0:33:93.30:0,93,1567	0/0:33,0:33:93.32:0,93,1641	0/0:21,0:21:51.17:0,51,896	0/0:36,0:36:96.33:0,96,1702	0/0:23,0:23:66.23:0,66,1171	0/0:25,0:25:63.17:0,63,1085	0/0:21,0:21:63.22:0,63,1111	0/0:25,0:25:75.26:0,75,1330	0/0:29,0:28:81.28:0,81,1426	0/0:14,0:14:42.14:0,42,745
chr10	61746586	.	AGT	A	11588.14	PASS	AB=0.897;AC=42;AF=0.750;AN=56;BaseQRankSum=6.557;DP=743;FS=5.676;HRun=0;HaplotypeScore=101.6747;InbreedingCoeff=0.7342;MQ=69.78;MQ0=6;MQRankSum=0.418;QD=20.92;ReadPosRankSum=4.666;VQSLOD=5.1664;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,31:40:83.92:963,84,0	1/1:3,8:12:29.92:336,30,0	0/0:34,0:23:6.40:0,6,458	0/0:33,0:27:25.64:0,26,446	1/1:7,14:22:36.11:432,36,0	1/1:5,21:27:47.98:553,48,0	1/1:11,18:31:50.82:567,51,0	0/0:30,0:30:56.96:0,57,583	1/1:2,26:29:71.86:805,72,0	1/1:6,14:20:42.11:482,42,0	1/1:4,11:14:17.62:215,18,0	0/1:20,4:24:89.67:90,0,609	0/0:30,2:32:3.33:0,3,1001	1/1:8,23:33:65.65:724,66,0	1/1:6,24:31:53.83:611,54,0	1/1:4,13:18:35.94:410,36,0	1/1:6,29:36:75.06:877,75,0	1/1:3,14:18:38.95:445,39,0	1/1:4,9:14:29.69:285,30,0	1/1:7,25:31:66.03:769,66,0	1/1:10,36:50:95.21:1061,95,0	0/1:14,1:15:2.87:3,0,415	0/0:19,1:20:15.19:0,15,707	0/0:36,4:40:0.47:0,0,1465	1/1:7,18:26:50.82:568,51,0	1/1:6,27:34:35.96:839,36,0	1/1:3,13:16:30.09:360,30,0	1/1:2,6:9:17.89:194,18,0
chr10	61746606	.	T	TGC	775.05	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-7.447;DP=754;FS=0.701;HRun=0;HaplotypeScore=145.5045;InbreedingCoeff=0.9893;MQ=60.80;MQ0=6;MQRankSum=5.075;QD=22.80;ReadPosRankSum=-4.484;VQSLOD=2.7209;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,110,862	0/0:11,0:11:32.85:0,33,253	0/0:40,0:27:37.46:0,37,528	0/0:28,0:19:39.06:0,39,460	0/0:17,0:17:41.91:0,42,333	0/0:25,0:25:56.87:0,57,452	0/0:24,0:24:56.87:0,57,451	1/1:5,28:34:70.84:870,71,0	0/0:31,0:30:80.70:0,81,630	0/0:20,0:21:56.60:0,57,450	0/0:13,0:12:23.95:0,24,192	0/0:25,0:25:65.59:0,66,770	0/0:29,0:29:81.14:0,81,1036	0/0:31,0:31:80.61:0,81,629	0/0:35,0:35:77.48:0,77,601	0/0:20,0:20:53.80:0,54,424	0/0:36,0:36:83.76:0,84,663	0/0:19,0:19:50.83:0,51,397	0/0:19,0:19:50.05:0,50,387	0/0:29,0:27:71.79:0,72,563	0/0:57,0:57:99:0,133,1050	0/0:14,0:14:39.06:0,39,463	0/0:23,0:23:68.98:0,69,797	0/0:43,0:43:99:0,123,1558	0/0:23,0:23:53.49:0,53,427	0/0:36,0:36:95.97:0,96,789	0/0:18,0:18:41.85:0,42,326	0/0:7,0:7:17.95:0,18,140
chr10	61746941	.	T	TG	712.59	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-6.379;DP=480;FS=0.000;HRun=2;HaplotypeScore=54.5228;InbreedingCoeff=0.9799;MQ=75.13;MQ0=0;MQRankSum=1.491;QD=32.39;ReadPosRankSum=-2.476;VQSLOD=2.5665;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,108,1338	0/0:10,0:10:27.08:0,27,334	0/0:12,0:12:21.07:0,21,260	0/0:13,0:13:23.68:0,24,276	0/0:14,0:14:33.10:0,33,408	0/0:9,0:9:21.06:0,21,260	0/0:18,0:18:45.14:0,45,557	1/1:2,20:22:60.17:807,60,0	0/0:10,0:10:30.09:0,30,371	0/0:8,0:8:21.07:0,21,258	0/0:14,0:13:30.09:0,30,371	0/0:17,0:17:51.13:0,51,606	0/0:17,0:17:51.16:0,51,632	0/0:18,0:18:54.17:0,54,667	0/0:10,0:10:24.08:0,24,297	0/0:11,0:11:33.10:0,33,409	0/0:40,0:39:99:0,114,1384	0/0:24,0:24:69.22:0,69,855	0/0:13,0:13:33.10:0,33,409	0/0:23,0:23:60.18:0,60,743	0/0:19,0:19:54.17:0,54,669	0/0:12,0:12:33.10:0,33,409	0/0:12,0:12:27.08:0,27,334	0/0:26,0:26:72.23:0,72,892	0/0:20,0:20:54.17:0,54,664	0/0:19,0:19:42.13:0,42,517	0/0:14,0:14:42.13:0,42,521	0/0:13,0:13:39.12:0,39,479
chr10	61747133	.	T	TAA	834.95	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=-5.403;DP=474;FS=8.595;HRun=9;HaplotypeScore=60.0309;InbreedingCoeff=0.6879;MQ=72.04;MQ0=0;MQRankSum=0.817;QD=20.87;ReadPosRankSum=-4.695;VQSLOD=0.8333;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:66.14:0,66,702	0/0:4,0:4:12.03:0,12,128	0/1:9,0:8:2.77:3,0,23	0/0:8,0:7:10.99:0,11,90	0/0:24,0:24:54.07:0,54,575	0/0:17,0:16:48.10:0,48,502	0/0:12,0:12:30.05:0,30,311	1/1:6,23:31:66.56:929,67,0	0/0:9,0:9:22.92:0,23,164	0/0:22,0:22:60.15:0,60,639	0/0:18,0:18:48.10:0,48,503	0/0:20,0:20:60.15:0,60,639	0/0:15,0:16:44.83:0,45,450	0/0:17,0:17:42.09:0,42,446	0/0:13,0:13:36.07:0,36,374	0/0:9,0:9:27.04:0,27,276	0/0:37,0:37:99:0,99,1045	0/0:22,0:22:60.11:0,60,628	0/0:20,0:20:54.06:0,54,555	0/0:15,0:15:39.09:0,39,413	0/0:8,0:8:24.06:0,24,255	0/0:16,0:16:48.06:0,48,496	0/0:18,0:18:47.85:0,48,476	0/0:7,0:7:17.82:0,18,159	0/0:20,0:20:54.13:0,54,575	0/0:26,0:26:69.15:0,69,729	0/0:23,0:23:66.16:0,66,702	0/0:7,0:7:15.03:0,15,160
chr10	61749172	.	TAC	T	897.53	PASS	AB=0.918;AC=4;AF=0.071;AN=56;BaseQRankSum=6.976;DP=761;FS=0.629;HRun=0;HaplotypeScore=92.9565;InbreedingCoeff=0.4537;MQ=68.11;MQ0=8;MQRankSum=1.537;QD=12.64;ReadPosRankSum=-5.023;VQSLOD=2.4917;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,102,1578	0/0:10,0:10:27.09:0,27,446	0/0:63,1:34:12.83:0,13,585	0/0:50,0:31:48.25:0,48,632	0/0:15,0:15:39.06:0,39,607	0/0:15,0:15:36.12:0,36,594	0/0:26,1:27:31.37:0,31,1018	1/1:12,26:38:60.27:960,60,0	0/0:23,0:23:66.23:0,66,1089	0/0:26,0:26:66.21:0,66,1066	0/0:24,1:24:24.41:0,24,845	0/0:31,0:31:78.24:0,78,1228	0/0:28,0:28:72.21:0,72,1134	0/0:27,0:27:69.23:0,69,1107	0/0:19,0:19:49.05:0,49,781	0/0:27,0:27:71.16:0,71,1178	0/0:45,0:45:99:0,115,1792	0/0:28,0:28:72.25:0,72,1178	0/0:25,0:25:66.16:0,66,976	0/1:15,1:16:25.75:26,0,597	0/0:41,1:42:73.50:0,74,1681	0/0:21,0:21:54.18:0,54,892	0/0:20,0:20:51.16:0,51,813	0/0:33,0:33:87.28:0,87,1419	0/1:15,2:17:27.58:28,0,570	0/0:13,0:13:27.56:0,28,448	0/0:20,0:20:51.16:0,51,816	0/0:12,0:12:30.10:0,30,492
chr10	61750098	.	G	GT	631.91	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.984;DP=567;FS=2.925;HRun=7;HaplotypeScore=55.0284;InbreedingCoeff=0.9556;MQ=72.06;MQ0=0;MQRankSum=-5.135;QD=22.57;ReadPosRankSum=-4.467;VQSLOD=1.7232;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,102,979	0/0:15,0:15:42.05:0,42,400	0/0:11,0:11:19.79:0,20,176	0/0:9,0:9:11.90:0,12,96	0/0:31,0:31:84.12:0,84,805	0/0:31,0:30:93.13:0,93,892	0/0:20,0:20:48:0,48,438	1/1:10,18:28:63.14:727,63,0	0/0:13,0:13:36.05:0,36,348	0/0:23,0:23:60.08:0,60,574	0/0:23,0:23:69.11:0,69,666	0/0:12,0:12:36.05:0,36,344	0/0:19,0:19:57.08:0,57,544	0/0:20,0:20:60.10:0,60,579	0/0:20,0:20:48.05:0,48,457	0/0:17,0:17:45.06:0,45,430	0/0:22,0:22:66.11:0,66,637	0/0:28,0:28:81.13:0,81,782	0/0:15,0:15:39.04:0,39,368	0/0:25,0:25:69.10:0,69,666	0/0:10,0:10:21.03:0,21,203	0/0:17,0:17:51.07:0,51,486	0/0:21,0:21:60.09:0,60,579	0/0:8,0:8:21.03:0,21,203	0/0:23,0:23:57.07:0,57,544	0/0:25,0:25:66.10:0,66,637	0/0:36,0:36:99:0,102,964	0/0:10,0:10:27.04:0,27,261
chr10	61750111	.	AT	A	563.10	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.947;DP=575;FS=0.000;HRun=5;HaplotypeScore=56.4456;InbreedingCoeff=0.9670;MQ=66.23;MQ0=0;MQRankSum=-4.642;QD=24.48;ReadPosRankSum=-3.299;VQSLOD=1.5630;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,102,1393	0/0:15,0:15:42.14:0,42,574	0/0:9,0:9:26.90:0,27,298	0/0:7,0:7:15.01:0,15,172	0/0:31,0:31:90.22:0,90,1193	0/0:33,0:32:90.30:0,90,1231	0/0:19,0:19:54.15:0,54,707	1/1:5,18:23:60.15:658,60,0	0/0:15,0:15:45.15:0,45,614	0/0:19,0:19:57.19:0,57,780	0/0:28,0:28:84.25:0,84,1116	0/0:14,0:14:42.14:0,42,574	0/0:19,0:19:51.13:0,51,647	0/0:24,0:24:69.20:0,69,909	0/0:17,0:17:48.16:0,48,656	0/0:16,0:16:48.15:0,48,640	0/0:26,0:26:78.26:0,78,1066	0/0:29,0:29:84.26:0,84,1128	0/0:19,0:19:57.14:0,57,729	0/0:32,0:32:72.62:0,73,1101	0/0:6,0:6:18.06:0,18,246	0/0:17,0:17:42.14:0,42,574	0/0:25,0:25:72.21:0,72,952	0/0:7,0:7:18.06:0,18,246	0/0:23,0:23:69.20:0,69,898	0/0:23,0:23:60.18:0,60,789	0/0:34,0:34:90.27:0,90,1199	0/0:10,0:10:27.09:0,27,368
chr10	61752545	.	A	AAC	406.85	PASS	AB=0.519;AC=5;AF=0.089;AN=56;BaseQRankSum=3.025;DP=624;FS=0.777;HRun=0;HaplotypeScore=87.8360;InbreedingCoeff=0.7784;MQ=68.89;MQ0=17;MQRankSum=0.323;QD=5.65;ReadPosRankSum=-0.318;VQSLOD=2.8457;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:84.20:0,84,676	0/0:7,0:7:14.98:0,15,124	0/0:32,0:20:44.65:0,45,442	0/0:52,0:20:41.95:0,42,457	0/0:19,0:18:47.32:0,47,390	0/0:21,0:20:44.94:0,45,371	0/0:30,0:30:55.14:0,55,509	0/0:33,0:33:80.65:0,81,709	0/0:22,0:22:47.92:0,48,392	0/0:15,0:14:34.43:0,34,337	0/0:12,0:12:32.91:0,33,268	0/0:21,0:20:47.66:0,48,395	0/0:22,0:21:53.94:0,54,448	0/0:22,0:22:38.87:0,39,412	0/0:18,0:18:35.62:0,36,295	0/0:17,0:17:29.09:0,29,320	0/0:16,0:16:38.77:0,39,305	0/0:19,0:17:32.73:0,33,263	0/0:22,0:21:45.30:0,45,380	0/0:12,0:12:26.98:0,27,229	0/0:41,0:40:61.51:0,62,587	1/1:13,0:12:20.97:173,21,0	1/1:19,0:19:39.36:318,39,0	0/1:3,36:39:14.13:45,0,14	0/0:14,0:14:32.94:0,33,270	0/0:22,0:21:56.75:0,57,485	0/0:17,0:17:45.47:0,45,343	0/0:9,0:9:17.75:0,18,147
chr10	61753050	.	CT	C	713.51	PASS	AB=0.934;AC=5;AF=0.089;AN=56;BaseQRankSum=6.082;DP=649;FS=0.000;HRun=10;HaplotypeScore=68.0828;InbreedingCoeff=0.3903;MQ=74.31;MQ0=1;MQRankSum=0.703;QD=7.84;ReadPosRankSum=-2.749;VQSLOD=1.2604;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:70.35:0,70,716	0/0:11,0:11:30.08:0,30,332	0/0:22,0:18:16:0,16,184	0/1:18,0:12:11.48:11,0,66	0/0:22,0:23:60:0,60,645	0/0:24,1:26:39.93:0,40,635	0/0:25,0:25:69.17:0,69,754	1/1:4,30:34:89.97:781,90,0	0/1:13,2:15:33.63:34,0,293	0/0:21,0:21:51.13:0,51,558	0/0:24,1:25:37.11:0,37,628	0/1:21,2:23:1.01:1,0,432	0/0:25,0:28:72:0,72,759	0/0:8,0:8:18.05:0,18,199	0/0:17,2:19:19.07:0,19,439	0/0:16,0:16:45.11:0,45,491	0/0:24,0:24:57.14:0,57,622	0/0:22,1:23:28.01:0,28,505	0/0:16,0:17:38.94:0,39,412	0/0:27,0:27:62.69:0,63,687	0/0:15,0:14:33.09:0,33,365	0/0:25,1:26:40.21:0,40,656	0/0:19,0:20:35.87:0,36,369	0/0:25,0:25:69.19:0,69,763	0/0:32,2:34:61.18:0,61,898	0/0:36,0:36:81.21:0,81,887	0/0:36,0:36:87.17:0,87,931	0/0:18,0:19:50.89:0,51,510
chr10	61754190	.	TAGAG	T	1358.11	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.569;DP=573;FS=5.088;HRun=0;HaplotypeScore=92.9716;InbreedingCoeff=0.9752;MQ=88.47;MQ0=0;MQRankSum=-3.562;QD=42.44;ReadPosRankSum=2.327;VQSLOD=3.6855;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:78.27:0,78,2125	0/0:9,0:9:27.09:0,27,738	0/0:24,0:24:63.22:0,63,1687	0/0:19,0:19:54.08:0,54,1378	0/0:25,0:25:75.26:0,75,2044	0/0:23,0:23:66.23:0,66,1807	0/0:17,0:17:48.15:0,48,1243	0/0:26,0:26:72.24:0,72,1862	0/0:24,0:24:72.23:0,72,1906	0/0:23,0:23:69.24:0,69,1887	0/0:11,0:11:30.10:0,30,822	0/0:19,0:19:54.19:0,54,1468	0/0:15,0:15:45.15:0,45,1233	0/0:16,0:16:45.15:0,45,1233	0/0:21,0:21:57.20:0,57,1563	0/0:14,0:14:42.14:0,42,1150	1/1:2,30:32:75.26:1453,75,0	0/0:15,0:15:45.15:0,45,1212	0/0:20,0:20:60.21:0,60,1635	0/0:22,0:22:66.23:0,66,1799	0/0:59,0:59:99:0,166,4450	0/0:6,0:6:18.06:0,18,485	0/0:12,0:12:36.12:0,36,977	0/0:22,0:22:60.18:0,60,1584	0/0:16,0:16:48.16:0,48,1315	0/0:28,0:28:84.29:0,84,2270	0/0:24,0:24:69.24:0,69,1880	0/0:5,0:5:15.05:0,15,411
chr10	61755804	.	GA	G	5601.07	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=6.524;DP=368;FS=7.434;HRun=7;HaplotypeScore=62.4731;InbreedingCoeff=0.9556;MQ=88.85;MQ0=0;MQRankSum=-7.454;QD=24.25;ReadPosRankSum=2.794;VQSLOD=5.2854;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,14:15:39.08:397,39,0	1/1:5,3:8:8.98:83,9,0	0/0:25,0:25:51.79:0,52,597	0/0:27,0:26:45.74:0,46,442	1/1:5,12:17:30.06:306,30,0	1/1:1,11:12:33.07:336,33,0	1/1:1,14:15:39.02:385,39,0	0/0:26,0:26:57.18:0,57,717	1/1:3,12:15:30.06:306,30,0	1/1:0,11:11:33.07:336,33,0	1/1:2,6:8:21.04:213,21,0	1/1:5,4:9:14.99:142,15,0	1/1:2,2:4:6.01:61,6,0	1/1:0,8:8:24.02:234,24,0	1/1:0,5:5:15.03:153,15,0	1/1:2,8:10:24:233,24,0	1/1:3,8:11:24.05:245,24,0	1/1:1,10:11:30.06:306,30,0	1/1:0,9:9:27.06:275,27,0	1/1:4,8:12:24.05:245,24,0	1/1:1,10:11:24.05:245,24,0	0/0:21,0:21:60.19:0,60,755	0/0:19,0:19:51.16:0,51,642	0/0:19,0:19:54.17:0,54,679	1/1:1,9:10:24.05:245,24,0	1/1:0,9:9:27.06:275,27,0	1/1:0,13:13:39.09:397,39,0	1/1:2,6:8:18.04:184,18,0
chr10	61755823	.	T	TGGGGTG	7505.25	PASS	AB=0.889;AC=42;AF=0.750;AN=56;BaseQRankSum=4.093;DP=342;FS=12.160;HRun=0;HaplotypeScore=99.2013;InbreedingCoeff=0.6844;MQ=82.46;MQ0=0;MQRankSum=-9.912;QD=33.51;ReadPosRankSum=0.459;VQSLOD=3.6219;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,2:10:12.04:384,12,0	1/1:4,1:5:6.01:123,6,0	0/0:21,0:21:17.16:0,17,245	0/1:27,0:26:6.30:6,0,363	1/1:8,3:11:6.02:199,6,0	1/1:4,3:8:12.04:363,12,0	1/1:13,3:16:15.02:347,15,0	0/0:20,0:20:12.04:0,12,242	0/0:18,0:18:45.15:0,45,950	1/1:6,3:9:15.05:432,15,0	1/1:5,2:7:6.02:197,6,0	1/1:4,3:9:18.06:559,18,0	1/1:4,2:7:15.05:440,15,0	1/1:7,3:10:24.06:670,24,0	1/1:3,3:7:15.05:468,15,0	0/1:10,3:13:2.15:480,0,2	1/1:8,2:10:12.04:397,12,0	1/1:10,0:10:3.01:99,3,0	1/1:9,2:11:15.05:452,15,0	1/1:4,1:6:6.02:196,6,0	1/1:12,0:12:3.01:46,3,0	0/0:18,0:18:42.14:0,42,886	0/0:23,0:23:51.14:0,51,987	0/0:18,0:18:48.16:0,48,1014	1/1:5,3:8:15.05:436,15,0	1/1:6,1:7:9.03:244,9,0	1/1:11,5:16:23.87:743,24,0	1/1:2,2:4:9.02:224,9,0
chr10	61755840	.	T	TGGGGGG	5113.97	PASS	AB=0.981;AC=22;AF=0.393;AN=56;BaseQRankSum=8.553;DP=347;FS=14.825;HRun=5;HaplotypeScore=94.7335;InbreedingCoeff=-0.5194;MQ=75.55;MQ0=0;MQRankSum=-9.516;QD=24.24;ReadPosRankSum=4.271;VQSLOD=0.8268;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:12,1:13:99:370,0,138	0/1:5,0:5:30.92:91,0,31	0/0:16,0:16:38.95:0,39,499	0/0:19,0:18:3.05:0,3,514	0/1:7,0:7:14.93:160,0,15	0/1:12,0:12:99:249,0,148	0/1:14,0:14:99:358,0,108	0/0:23,0:23:63:0,63,730	0/0:23,0:23:63.12:0,63,1205	0/1:8,1:9:74.72:339,0,75	0/1:6,0:6:28.91:159,0,29	0/1:15,0:15:99:292,0,128	0/1:9,0:9:72.90:150,0,73	0/1:10,1:11:44.90:501,0,45	0/1:7,0:7:43.89:235,0,44	0/1:11,0:11:97.83:259,0,98	0/1:10,0:10:63.92:224,0,64	0/1:6,1:7:68.93:240,0,69	0/1:10,0:10:99:134,0,150	0/1:4,0:4:15.97:153,0,16	0/1:18,0:18:89.38:89,0,193	0/0:15,0:15:42.14:0,42,987	0/0:20,0:20:57.10:0,57,1160	0/0:20,0:20:60.12:0,60,1219	0/1:12,0:12:99:251,0,129	0/1:12,0:12:99:120,0,152	1/1:11,0:11:9.09:577,9,0	0/1:8,0:8:93.82:162,0,94
chr10	61757211	.	G	GT	902.07	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-5.141;DP=678;FS=1.350;HRun=3;HaplotypeScore=68.0145;InbreedingCoeff=0.9836;MQ=72.71;MQ0=0;MQRankSum=4.019;QD=30.07;ReadPosRankSum=-4.720;VQSLOD=1.6300;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,131,1572	0/0:13,0:13:25.92:0,26,344	0/0:17,0:16:17.88:0,18,281	0/0:18,0:17:19.09:0,19,243	0/0:21,0:21:60.13:0,60,672	0/0:19,0:19:48.12:0,48,560	0/0:22,0:22:60.16:0,60,697	1/1:3,27:30:81.11:997,81,0	0/0:23,0:23:54.26:0,54,661	0/0:33,0:33:90.18:0,90,1009	0/0:14,0:14:42.10:0,42,471	0/0:31,0:31:93.23:0,93,1068	0/0:18,0:18:54.16:0,54,633	0/0:20,0:20:42.52:0,43,615	0/0:24,0:24:72.22:0,72,861	0/0:25,0:25:72.18:0,72,820	0/0:30,0:30:90.20:0,90,1024	0/0:31,0:31:90.07:0,90,962	0/0:20,0:20:57.10:0,57,634	0/0:17,0:17:48.12:0,48,545	0/0:26,0:26:72.21:0,72,851	0/0:18,0:18:47.72:0,48,503	0/0:23,0:23:36.42:0,36,669	0/0:35,0:35:99:0,105,1234	0/0:29,0:29:84.14:0,84,943	0/0:24,0:24:66.19:0,66,781	0/0:34,0:33:99:0,99,1143	0/0:10,0:10:30.02:0,30,341
chr10	61757214	.	T	TA	184.41	PASS	AB=0.923;AC=3;AF=0.054;AN=56;BaseQRankSum=5.361;DP=681;FS=2.741;HRun=9;HaplotypeScore=70.8035;InbreedingCoeff=0.7777;MQ=71.46;MQ0=0;MQRankSum=0.170;QD=4.73;ReadPosRankSum=-3.212;VQSLOD=0.0995;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:52,1:54:99:0,115,1191	0/1:11,1:12:0.21:0,0,224	0/0:15,0:15:28.99:0,29,235	0/0:17,0:16:23.91:0,24,193	0/0:21,0:21:56.98:0,57,492	0/0:17,0:17:50.97:0,51,439	0/0:21,0:21:56.97:0,57,491	1/1:27,0:27:53.74:279,54,0	0/0:21,1:22:20.80:0,21,407	0/0:31,0:31:74.96:0,75,648	0/0:17,0:17:38.96:0,39,335	0/0:35,0:35:95.90:0,96,820	0/0:21,0:21:62.91:0,63,530	0/0:21,0:21:23.77:0,24,432	0/0:25,0:25:71.98:0,72,625	0/0:27,0:27:68.94:0,69,593	0/0:30,0:30:80.96:0,81,697	0/0:31,0:31:71.93:0,72,618	0/0:19,0:19:47.96:0,48,412	0/0:16,0:16:41.99:0,42,364	0/0:25,0:25:71.96:0,72,619	0/0:17,0:18:44.65:0,45,367	0/0:22,1:23:20.93:0,21,410	0/0:36,0:36:99:0,102,883	0/0:30,0:30:74.97:0,75,651	0/0:24,0:24:62.98:0,63,547	0/0:34,0:33:89.96:0,90,777	0/0:11,0:11:29.98:0,30,257
chr10	61758092	.	CA	C	237.03	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=1.217;DP=517;FS=16.908;HRun=2;HaplotypeScore=65.8890;InbreedingCoeff=0.9194;MQ=77.54;MQ0=9;MQRankSum=0.087;QD=14.81;ReadPosRankSum=-3.800;VQSLOD=1.2055;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:53.76:0,54,691	0/0:9,0:9:23.15:0,23,269	0/0:37,0:23:60.19:0,60,805	0/0:36,0:24:69.20:0,69,904	0/0:18,0:18:40.48:0,40,444	0/0:21,0:21:40.63:0,41,518	0/0:25,0:25:74.39:0,74,937	1/1:2,14:11:27.54:331,28,0	0/0:15,0:15:24.06:0,24,310	0/0:15,0:15:42.14:0,42,561	0/0:14,0:14:42.13:0,42,550	0/0:15,0:15:45.15:0,45,625	0/0:8,0:8:18.05:0,18,225	0/0:11,0:10:24.04:0,24,288	0/0:20,0:20:53.71:0,54,639	0/0:18,0:18:41.69:0,42,517	0/0:41,0:41:99:0,106,1281	0/0:18,0:18:44.56:0,45,426	0/0:8,0:8:24.08:0,24,337	0/0:12,0:12:27.88:0,28,314	0/0:34,0:34:73.76:0,74,921	0/0:9,0:9:20.42:0,20,225	0/0:15,0:15:29.91:0,30,232	0/0:18,0:18:41.01:0,41,459	0/0:20,0:20:56.65:0,57,690	0/0:15,0:14:30.81:0,31,394	0/0:19,0:18:53.67:0,54,743	0/0:6,0:5:8.62:0,9,90
chr10	61758093	.	AACAC	A	707.85	PASS	AB=0.911;AC=12;AF=0.240;AN=50;BaseQRankSum=3.455;DP=528;FS=22.509;HRun=0;HaplotypeScore=87.6490;InbreedingCoeff=0.3794;MQ=75.30;MQ0=10;MQRankSum=0.884;QD=4.45;ReadPosRankSum=1.530;VQSLOD=-0.1725;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:24:8.38:0,8,42	0/1:8,1:10:28.70:29,0,218	./.	./.	0/0:12,0:19:16.91:0,17,141	0/0:21,0:21:36.10:0,36,634	0/0:25,0:27:32.13:0,32,609	./.	0/0:9,0:21:12.02:0,12,168	0/0:15,0:15:15.05:0,15,253	0/0:15,0:15:5.99:0,6,48	0/0:16,0:16:15.05:0,15,320	0/0:7,0:7:9:0,9,160	0/0:10,0:9:5.87:0,6,35	0/0:18,0:21:29.81:0,30,535	0/0:16,0:17:23.79:0,24,417	0/1:39,2:42:39.32:39,0,762	1/1:10,8:18:21.06:307,21,0	0/0:9,0:9:15.05:0,15,294	0/1:13,0:14:31.71:32,0,161	0/1:31,1:34:36.07:36,0,468	1/1:6,3:9:2.92:47,3,0	1/1:5,8:13:17.99:279,18,0	1/1:14,4:18:6.02:93,6,0	0/0:20,0:21:23.68:0,24,347	0/0:16,0:16:7.57:0,8,49	0/0:17,0:17:11.18:0,11,689	0/0:4,0:5:2.74:0,3,12
chr10	61758464	.	A	ATG	17945.75	PASS	AB=0.583;AC=42;AF=0.750;AN=56;BaseQRankSum=-4.507;DP=817;FS=11.191;HRun=0;HaplotypeScore=126.3350;InbreedingCoeff=0.6845;MQ=57.94;MQ0=10;MQRankSum=5.185;QD=27.23;ReadPosRankSum=3.757;VQSLOD=5.8211;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,33:39:72.25:1205,72,0	1/1:3,11:13:27.09:435,27,0	0/0:43,0:21:41.58:0,42,537	0/0:34,0:16:27.07:0,27,327	0/1:6,19:25:2.17:516,0,2	0/1:5,14:18:8.06:422,0,8	1/1:7,22:29:35.14:600,35,0	1/1:33,0:29:37.56:292,38,0	1/1:3,21:25:16.62:816,17,0	1/1:4,21:25:60.18:959,60,0	1/1:3,11:14:18.06:301,18,0	1/1:3,20:24:51.17:831,51,0	1/1:2,20:23:42.13:697,42,0	1/1:6,22:27:42.14:686,42,0	0/1:8,14:22:5.09:468,0,5	1/1:4,22:26:27.15:762,27,0	1/1:4,26:30:57.19:951,57,0	1/1:5,26:30:53.66:978,54,0	1/1:9,11:17:34.35:512,34,0	1/1:3,15:19:42.14:702,42,0	1/1:18,101:121:99:3264,196,0	0/0:24,0:24:57.15:0,57,691	0/0:20,0:20:33.09:0,33,405	0/0:37,0:37:42.05:0,42,517	1/1:7,13:20:27.09:452,27,0	1/1:8,34:40:93.26:1432,93,0	0/1:4,11:15:5.06:469,0,5	1/1:7,7:14:8.67:196,9,0
chr10	61758468	.	G	GTGTGTA	1961.89	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-4.339;DP=864;FS=1.329;HRun=0;HaplotypeScore=253.9688;InbreedingCoeff=0.8603;MQ=56.92;MQ0=13;MQRankSum=-5.322;QD=44.59;ReadPosRankSum=-7.911;VQSLOD=1.5653;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:37:58.48:0,58,205	0/0:16,0:15:16.18:0,16,88	0/0:44,0:21:47.61:0,48,884	0/0:43,0:18:26.78:0,27,537	0/0:27,0:27:31.88:0,32,201	0/0:19,0:18:31.21:0,31,191	0/0:28,0:28:30.78:0,31,124	1/1:9,26:39:93.16:2057,93,0	0/0:29,0:29:36.95:0,37,152	0/0:26,0:26:25.41:0,25,123	0/0:16,0:16:18.91:0,19,86	0/0:25,0:25:38.83:0,39,140	0/0:22,0:22:31.27:0,31,98	0/0:31,0:30:43.18:0,43,204	0/0:25,0:25:29.02:0,29,238	0/0:29,0:29:42.29:0,42,174	0/0:32,0:32:41.95:0,42,189	0/0:36,0:34:53.71:0,54,190	0/0:21,0:18:6.08:0,6,54	0/0:19,0:19:33.06:0,33,127	0/0:124,0:124:99:0,156,540	0/0:23,0:23:60.19:0,60,1195	0/0:19,0:19:36.11:0,36,743	0/0:36,0:36:41.76:0,42,870	0/0:19,0:19:25.97:0,26,108	0/0:43,0:41:31.80:0,32,230	0/0:19,0:19:31.19:0,31,182	0/0:11,0:11:11.88:0,12,54
chr10	61758517	.	TGA	T	2384.83	PASS	AB=0.998;AC=29;AF=0.518;AN=56;BaseQRankSum=7.762;DP=758;FS=6.439;HRun=0;HaplotypeScore=193.9053;InbreedingCoeff=-0.5174;MQ=44.09;MQ0=36;MQRankSum=5.434;QD=3.54;ReadPosRankSum=10.344;VQSLOD=0.8049;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:32:55.14:130,0,55	0/1:8,0:7:9.45:49,0,9	0/0:13,0:2:3.01:0,3,57	0/1:26,0:7:6:6,0,94	0/1:26,0:25:33.57:75,0,34	0/1:19,0:17:61.60:62,0,69	0/1:33,0:27:12.56:13,0,100	0/0:54,0:45:99:0,113,1441	0/1:28,0:27:19.52:82,0,20	0/1:33,0:29:74.98:190,0,75	0/1:10,0:9:30.09:42,0,30	1/1:27,1:26:22.75:111,23,0	0/1:19,0:17:67.45:83,0,67	0/1:30,1:29:12.56:142,0,13	0/1:21,0:19:61.76:82,0,62	0/1:29,0:29:42.39:113,0,42	1/1:27,0:27:7.59:207,8,0	1/1:27,0:27:49.62:288,50,0	0/1:27,0:22:96.25:96,0,205	0/1:17,0:16:20.58:44,0,21	0/1:97,1:96:99:293,0,199	0/1:20,0:18:16.74:62,0,17	0/0:18,0:17:2.99:0,3,24	0/1:38,0:38:35.75:36,0,36	0/1:21,0:20:6.85:7,0,80	0/1:27,0:23:99:116,0,137	1/1:14,1:14:9.57:147,10,0	0/1:12,0:12:9.55:68,0,10
chr10	61758519	.	AGT	A	7673.97	PASS	AB=0.694;AC=46;AF=0.821;AN=56;BaseQRankSum=2.939;DP=743;FS=0.575;HRun=0;HaplotypeScore=177.2229;InbreedingCoeff=0.4464;MQ=44.20;MQ0=36;MQRankSum=7.032;QD=11.64;ReadPosRankSum=5.132;VQSLOD=4.6898;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:20,13:32:38.28:416,38,0	1/1:7,2:8:13.59:147,14,0	0/0:8,0:1:3.01:0,3,48	0/0:21,0:4:6:0,6,56	1/1:15,11:25:20.55:236,21,0	1/1:13,5:16:14.71:186,15,0	0/1:23,11:28:24.92:64,0,25	0/0:54,1:46:71.28:0,71,1330	1/1:11,17:27:21.32:237,21,0	1/1:21,11:28:21.96:610,22,0	1/1:9,1:9:12.04:149,12,0	1/1:16,11:25:29.91:347,30,0	1/1:12,7:17:23.01:233,23,0	1/1:15,16:29:35.86:403,36,0	1/1:18,3:19:27.27:251,27,0	0/1:16,13:29:7.57:364,0,8	1/1:16,12:28:49.69:576,50,0	1/1:20,7:27:40.44:661,40,0	0/1:17,9:21:70.11:359,0,70	1/1:11,5:15:11.97:131,12,0	1/1:69,25:92:53:1022,53,0	1/1:16,4:18:3.69:240,4,0	0/1:5,12:16:0.01:0,0,0	1/1:10,32:42:8.42:101,8,0	1/1:11,10:20:6.02:76,6,0	1/1:19,5:20:29.87:341,30,0	1/1:7,8:14:32.31:366,32,0	1/1:8,4:12:14.78:157,15,0
chr10	61758529	.	TGTGA	T	5574.49	PASS	AB=0.987;AC=43;AF=0.796;AN=54;BaseQRankSum=3.811;DP=742;FS=1.702;HRun=0;HaplotypeScore=207.6305;InbreedingCoeff=0.3465;MQ=44.01;MQ0=37;MQRankSum=7.707;QD=8.42;ReadPosRankSum=1.457;VQSLOD=4.0656;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:37,0:35:42.67:279,43,0	0/1:9,0:8:0.93:116,0,1	0/0:3,0:1:3.01:0,3,38	./.	1/1:22,0:21:22.92:180,23,0	1/1:18,0:16:22.65:161,23,0	0/1:40,0:34:0.96:117,0,1	0/0:56,0:45:84.55:0,85,696	1/1:32,0:31:23.85:169,24,0	1/1:31,0:27:19.98:236,20,0	1/1:12,0:11:13.75:73,14,0	1/1:27,1:26:26.90:164,27,0	1/1:17,0:15:26.33:204,26,0	1/1:30,0:28:34.70:297,35,0	0/1:19,0:17:2.35:265,0,2	1/1:29,0:29:18.61:163,19,0	1/1:31,0:31:65.49:661,65,0	1/1:31,0:31:39.37:433,39,0	0/1:27,2:24:76:311,0,76	0/1:15,0:14:11.45:79,0,11	1/1:90,0:89:68.55:466,69,0	1/1:20,0:18:2.74:94,3,0	0/0:14,0:14:0.87:0,1,2	1/1:46,0:47:22.49:204,22,0	1/1:17,1:18:7.71:31,8,0	1/1:25,0:21:27.03:338,27,0	1/1:18,0:17:35.30:290,35,0	1/1:12,1:13:20.28:244,20,0
chr10	61758533	.	AGT	A	2504.82	PASS	AB=0.827;AC=40;AF=0.741;AN=54;BaseQRankSum=0.073;DP=732;FS=9.454;HRun=0;HaplotypeScore=205.9827;InbreedingCoeff=0.0654;MQ=44.20;MQ0=36;MQRankSum=1.767;QD=3.80;ReadPosRankSum=0.871;VQSLOD=1.5741;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:27,9:35:3.76:129,0,4	1/1:8,0:8:2.17:41,2,0	0/0:1,0:1:2.94:0,3,18	./.	1/1:17,5:21:8.76:77,9,0	1/1:14,4:16:17.98:189,18,0	0/1:30,9:34:27.55:113,0,28	0/0:48,0:43:5.92:0,6,39	0/1:21,0:30:6.29:6,0,18	1/1:29,2:27:7.23:68,7,0	1/1:10,1:10:2.91:33,3,0	1/1:20,6:26:3.35:71,3,0	1/1:12,2:15:19.79:165,20,0	0/1:20,11:30:3.70:122,0,4	0/1:16,3:17:11.12:159,0,11	0/1:21,0:30:15.10:17,0,15	1/1:20,10:30:27.93:404,28,0	1/1:28,2:30:17.77:171,18,0	0/1:26,2:23:0.04:114,0,0	1/1:14,2:15:6.42:67,6,0	0/1:81,2:82:50.37:75,0,50	1/1:17,0:18:2.84:14,3,0	0/0:13,0:15:2.11:0,2,9	1/1:44,0:49:25.81:120,26,0	1/1:14,4:17:3.01:34,3,0	1/1:23,1:21:9.64:176,10,0	1/1:17,4:21:13.23:174,13,0	1/1:9,2:12:15.49:104,15,0
chr10	61761154	.	T	TTC	1547.43	PASS	AB=0.852;AC=37;AF=0.740;AN=50;BaseQRankSum=-1.880;DP=343;FS=0.000;HRun=0;HaplotypeScore=62.7213;InbreedingCoeff=-0.0191;MQ=62.19;MQ0=4;MQRankSum=0.407;QD=5.59;ReadPosRankSum=-0.100;VQSLOD=2.1050;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:13:0.47:1,0,0	1/1:5,0:5:3.01:43,3,0	./.	./.	1/1:20,0:20:8.99:91,9,0	0/1:10,0:10:17.11:56,0,17	1/1:7,1:8:2.98:45,3,0	1/1:19,0:18:18.50:199,19,0	0/1:6,0:5:0:0,0,0	0/1:8,2:10:1.71:106,0,2	1/1:9,0:9:3:25,3,0	0/0:9,1:10:3.01:0,3,31	0/1:5,1:7:25.43:40,0,25	1/1:4,0:4:3.01:45,3,0	1/1:14,3:18:12.04:158,12,0	0/1:5,1:6:45.35:64,0,45	0/1:13,5:18:37.30:121,0,37	0/1:9,0:15:6.29:20,0,6	1/1:11,0:11:3.01:32,3,0	1/1:11,0:10:3.01:44,3,0	0/0:9,2:10:2.84:0,3,14	1/1:10,0:8:2.31:13,2,0	./.	0/1:11,0:10:0.17:0,0,0	1/1:14,1:15:11.97:114,12,0	1/1:18,0:17:21.88:217,22,0	0/1:11,5:16:30.01:198,0,30	1/1:13,0:13:5.11:38,5,0
chr10	61761205	.	CTA	C	501.19	PASS	AB=0.932;AC=17;AF=0.327;AN=52;BaseQRankSum=-2.630;DP=381;FS=3.098;HRun=0;HaplotypeScore=65.1675;InbreedingCoeff=-0.2057;MQ=71.41;MQ0=29;MQRankSum=-4.025;QD=3.71;ReadPosRankSum=-5.991;VQSLOD=0.1011;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:5:5.96:0,6,44	0/1:7,0:7:9.65:10,0,35	0/0:89,0:22:31.84:0,32,273	0/0:99,0:27:38.32:0,38,285	0/0:16,2:18:17.88:0,18,130	0/0:5,0:5:11.92:0,12,86	0/1:6,1:6:18.94:19,0,19	1/1:18,0:17:5.79:178,6,0	0/1:3,0:3:0:0,0,0	0/1:13,1:14:38.14:144,0,38	0/1:5,1:6:11.01:11,0,35	./.	0/1:4,0:4:15.99:16,0,35	0/1:2,1:3:0:0,0,0	0/1:5,1:6:16:16,0,33	0/1:3,2:5:21.89:22,0,35	0/1:11,0:11:32.04:51,0,32	0/0:8,0:5:5.01:0,5,28	0/1:8,0:8:25.81:81,0,26	0/1:7,0:7:9.03:9,0,73	0/0:2,0:1:3:0,3,25	0/1:12,0:10:0.01:0,0,0	0/0:3,0:3:0.47:0,0,2	./.	0/0:10,0:9:17.88:0,18,129	0/1:12,0:12:29.04:29,0,165	0/1:12,0:12:50.92:51,0,78	0/0:1,0:1:3:0,3,25
chr10	61762189	.	T	TG	2180.35	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-5.899;DP=755;FS=4.359;HRun=0;HaplotypeScore=119.5392;InbreedingCoeff=0.9978;MQ=80.95;MQ0=0;MQRankSum=-0.397;QD=43.61;ReadPosRankSum=-1.213;VQSLOD=2.7283;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:60,0:60:99:0,181,2502	0/0:14,0:14:42.13:0,42,571	0/0:22,0:22:63.06:0,63,804	0/0:19,0:19:51.06:0,51,608	0/0:17,0:17:48.15:0,48,654	0/0:20,0:20:57.17:0,57,763	0/0:37,0:37:99:0,111,1552	1/1:0,24:24:69.24:1103,69,0	1/1:0,26:26:75.26:1199,75,0	0/0:22,0:22:66.22:0,66,923	0/0:25,0:25:75.24:0,75,1031	0/0:42,0:42:99:0,126,1760	0/0:37,0:37:99:0,111,1552	0/0:29,0:29:81.27:0,81,1133	0/0:42,0:42:99:0,126,1696	0/0:34,0:34:99:0,99,1384	0/0:33,0:33:96.29:0,96,1322	0/0:34,0:34:99:0,99,1384	0/0:23,0:23:69.23:0,69,964	0/0:24,0:24:72.24:0,72,1006	0/0:33,0:33:96.30:0,96,1324	0/0:21,0:21:54.18:0,54,755	0/0:11,0:11:33.11:0,33,461	0/0:22,0:22:66.22:0,66,923	0/0:17,0:17:51.17:0,51,713	0/0:26,0:26:75.25:0,75,1048	0/0:33,0:33:99:0,99,1344	0/0:8,0:8:21.07:0,21,294
chr10	61762519	.	AT	A	10224.67	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=0.109;DP=594;FS=0.879;HRun=9;HaplotypeScore=72.8559;InbreedingCoeff=0.9803;MQ=61.60;MQ0=2;MQRankSum=-0.360;QD=22.37;ReadPosRankSum=4.360;VQSLOD=5.5407;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,24:30:66.03:604,66,0	1/1:1,9:10:27.01:247,27,0	0/0:22,0:17:33.09:0,33,368	0/0:13,0:12:6.41:0,6,147	1/1:2,22:24:57.01:522,57,0	1/1:1,19:20:51.03:467,51,0	1/1:1,14:15:33.02:302,33,0	0/0:32,0:32:84.25:0,84,969	0/0:19,0:19:51.15:0,51,588	1/1:6,30:36:87.02:789,87,0	1/1:2,27:29:75.02:682,75,0	1/1:4,19:23:51.02:467,51,0	1/1:5,23:28:63.03:576,63,0	1/1:2,16:18:45.02:412,45,0	1/1:1,23:24:63.03:577,63,0	1/1:2,19:21:48.02:439,48,0	1/1:0,22:22:51.03:467,51,0	1/1:2,20:22:57.03:522,57,0	1/1:0,14:14:42.02:384,42,0	1/1:3,28:31:81.03:737,81,0	1/1:1,10:11:24.01:220,24,0	0/0:4,0:19:42.91:0,43,242	0/0:0,0:20:48.48:0,48,252	0/0:5,0:12:20.04:0,20,112	1/1:1,22:23:60.03:549,60,0	1/1:3,22:25:66.03:604,66,0	1/1:3,18:21:44.92:412,45,0	1/1:1,9:10:27.01:247,27,0
chr10	61763063	.	C	CAGAT	22145.43	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=8.720;DP=713;FS=0.386;HRun=0;HaplotypeScore=182.6307;InbreedingCoeff=0.9859;MQ=60.62;MQ0=5;MQRankSum=-5.142;QD=39.47;ReadPosRankSum=0.394;VQSLOD=5.0048;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:35,1:36:54.10:987,54,0	1/1:14,0:14:33.09:583,33,0	0/0:28,0:21:50.49:0,50,710	0/0:36,0:29:47.31:0,47,800	1/1:29,3:32:74.87:1452,75,0	1/1:29,0:29:66.22:1280,66,0	1/1:30,6:36:66.20:1195,66,0	1/1:21,10:31:57.15:1308,57,0	0/0:24,0:24:69.20:0,69,1167	1/1:24,1:25:69.13:1315,69,0	1/1:17,0:17:33.10:682,33,0	1/1:29,2:31:78.24:1590,78,0	1/1:32,1:33:69.18:1206,69,0	1/1:18,2:20:42.14:778,42,0	1/1:30,3:32:75.23:1392,75,0	1/1:21,1:22:57.18:1147,57,0	1/1:27,1:28:53.67:980,54,0	1/1:14,1:15:33.07:670,33,0	1/1:21,1:22:50.45:668,50,0	1/1:22,1:23:42.13:774,42,0	1/1:29,1:30:27.09:478,27,0	0/0:24,0:24:66.16:0,66,1065	0/0:16,0:16:39.07:0,39,665	0/0:23,0:23:60.17:0,60,1001	1/1:21,0:21:48.15:962,48,0	1/1:29,2:31:84.18:1626,84,0	1/1:25,2:27:56.97:926,57,0	1/1:3,0:3:8.24:147,8,0
chr10	61763069	.	GA	G	4148.85	PASS	AB=0.976;AC=29;AF=0.518;AN=56;BaseQRankSum=15.288;DP=704;FS=0.000;HRun=2;HaplotypeScore=208.0140;InbreedingCoeff=-0.0001;MQ=66.61;MQ0=4;MQRankSum=-2.594;QD=7.56;ReadPosRankSum=8.827;VQSLOD=0.2273;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:33:1.63:186,0,2	1/1:13,0:13:13.66:141,14,0	0/0:32,0:25:60.55:0,61,883	0/0:37,1:32:75.59:0,76,1056	0/1:34,1:34:62.19:243,0,62	1/1:26,0:26:36.75:324,37,0	0/1:31,4:35:17.04:189,0,17	0/1:33,0:33:5.91:6,0,267	0/0:24,0:24:72.23:0,72,1054	0/1:26,0:26:68.93:187,0,69	0/1:17,1:18:13.47:149,0,13	1/1:29,0:29:7.74:318,8,0	0/1:32,0:32:86.11:196,0,86	1/1:19,0:19:25.02:236,25,0	0/1:33,0:32:29.25:290,0,29	0/1:22,0:22:2.11:252,0,2	1/1:23,2:26:34.44:257,34,0	0/1:16,1:17:26.76:111,0,27	0/1:20,0:20:24.78:25,0,234	0/1:24,1:24:50.70:158,0,51	1/1:26,1:27:24.84:160,25,0	0/0:22,0:22:66.22:0,66,989	0/0:15,0:15:39.13:0,39,584	0/0:23,0:22:69.18:0,69,990	1/1:22,0:22:29.46:244,29,0	0/1:32,0:32:60.36:241,0,60	0/1:21,2:23:30.67:223,0,31	0/1:3,0:3:7.76:14,0,8
chr10	61763070	.	A	AT	13432.94	PASS	AB=0.880;AC=42;AF=0.750;AN=56;BaseQRankSum=13.022;DP=685;FS=2.934;HRun=0;HaplotypeScore=175.8854;InbreedingCoeff=0.7712;MQ=67.34;MQ0=4;MQRankSum=-6.190;QD=25.25;ReadPosRankSum=3.763;VQSLOD=4.7484;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:23,9:32:46.34:580,46,0	1/1:7,5:12:32.92:414,33,0	0/0:31,0:25:42.59:0,43,823	0/0:37,0:31:75.12:0,75,989	1/1:25,10:35:46.02:805,46,0	1/1:19,7:26:68.42:936,68,0	1/1:18,15:33:50.85:667,51,0	0/1:23,3:26:69.78:279,0,70	0/0:24,0:24:72.23:0,72,989	1/1:18,7:25:41.03:753,41,0	1/1:12,5:17:16.71:420,17,0	1/1:25,3:28:60.51:978,61,0	1/1:27,6:33:30.87:747,31,0	1/1:13,5:18:41.89:563,42,0	1/1:26,5:30:75.11:927,75,0	1/1:21,1:22:60.73:816,61,0	1/1:20,6:26:51.87:674,52,0	1/1:15,3:18:22.99:408,23,0	0/1:16,3:19:85.35:253,0,85	1/1:14,10:23:3.81:487,4,0	1/1:21,7:28:26.39:377,26,0	0/0:22,0:22:66.22:0,66,923	0/0:15,0:15:39.13:0,39,545	0/0:23,0:22:69.18:0,69,927	1/1:17,4:21:47.62:689,48,0	1/1:19,12:31:59.09:955,59,0	1/1:19,5:24:38.42:636,38,0	1/1:3,0:3:8.28:71,8,0
chr10	61763072	.	G	GA	3124.88	PASS	AB=0.978;AC=26;AF=0.464;AN=56;BaseQRankSum=11.188;DP=676;FS=6.950;HRun=2;HaplotypeScore=208.1660;InbreedingCoeff=-0.2041;MQ=69.91;MQ0=4;MQRankSum=3.169;QD=5.96;ReadPosRankSum=8.483;VQSLOD=0.1855;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:31,0:31:33.80:123,0,34	0/1:10,1:11:1.12:75,0,1	0/0:32,0:25:66.14:0,66,823	0/0:38,0:34:57.93:0,58,894	0/1:34,0:34:99:127,0,128	1/1:26,0:26:20.76:296,21,0	0/1:34,1:35:60.90:61,0,86	0/1:20,3:23:21.65:22,0,305	0/0:23,0:23:69.22:0,69,893	0/1:24,0:24:99:187,0,110	0/1:18,0:18:21.54:164,0,22	0/1:27,1:28:25.25:317,0,25	0/1:31,0:31:99:215,0,112	0/1:18,1:19:7.33:116,0,7	0/1:30,0:29:64.07:203,0,64	0/1:22,0:22:2.02:269,0,2	0/1:26,0:26:4.84:163,0,5	0/1:18,0:18:62.67:92,0,63	0/1:18,0:18:7.78:8,0,255	0/1:23,1:23:66.14:126,0,66	1/1:27,1:28:12.36:95,12,0	0/0:22,0:22:66.21:0,66,857	0/0:14,0:14:39.13:0,39,506	0/0:23,0:22:69.22:0,69,890	1/1:20,0:20:26.94:257,27,0	0/1:31,0:31:99:232,0,104	0/1:23,1:24:75.72:115,0,76	1/1:3,0:3:7.56:35,8,0
chr10	61763073	.	AG	A	9626.15	PASS	AB=0.932;AC=42;AF=0.750;AN=56;BaseQRankSum=15.090;DP=682;FS=2.953;HRun=1;HaplotypeScore=188.5166;InbreedingCoeff=0.7799;MQ=70.54;MQ0=4;MQRankSum=-3.920;QD=18.20;ReadPosRankSum=4.590;VQSLOD=5.2366;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:22,9:31:42.01:427,42,0	1/1:7,4:11:25.85:287,26,0	0/0:31,0:24:69.18:0,69,1054	0/0:38,1:35:84.74:0,85,1240	1/1:23,10:33:46.07:494,46,0	1/1:20,7:27:68.59:798,69,0	1/1:21,14:35:56.48:401,56,0	0/1:25,0:25:3.94:4,0,400	0/0:23,0:23:69.24:0,69,1102	1/1:17,7:24:27.24:560,27,0	1/1:13,5:18:17.76:313,18,0	1/1:25,2:27:66.43:747,66,0	1/1:25,6:31:25.03:563,25,0	1/1:15,4:19:34.67:380,35,0	1/1:25,5:30:54.61:559,55,0	1/1:21,1:22:55.31:692,55,0	1/1:19,7:26:52.29:539,52,0	1/1:16,2:18:28.73:280,29,0	0/1:16,3:19:99:141,0,116	1/1:16,9:24:1.08:322,1,0	1/1:22,6:28:26.81:286,27,0	0/0:22,0:22:66.23:0,66,1054	0/0:15,0:15:42.13:0,42,647	0/0:23,0:22:69.24:0,69,1103	1/1:17,4:21:49.86:612,50,0	1/1:19,12:31:48.33:776,48,0	1/1:21,4:25:37.21:399,37,0	1/1:3,0:3:5.05:47,5,0
chr10	61763074	.	GAGAC	G	11728.30	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=12.528;DP=697;FS=0.737;HRun=0;HaplotypeScore=219.2532;InbreedingCoeff=0.9529;MQ=71.57;MQ0=4;MQRankSum=-5.956;QD=23.00;ReadPosRankSum=2.325;VQSLOD=4.6650;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:29,2:31:47.14:474,47,0	1/1:10,1:11:26.65:259,27,0	0/0:33,0:26:51.12:0,51,1272	0/0:38,0:34:69.01:0,69,1488	1/1:33,2:35:57.85:647,58,0	1/1:26,2:28:80.12:834,80,0	1/1:27,7:34:47.99:429,48,0	0/0:16,0:31:69.14:0,69,1067	0/0:23,0:23:66.23:0,66,1677	1/1:20,4:24:59.91:758,60,0	1/1:16,2:18:32.60:365,33,0	1/1:26,1:27:63.09:781,63,0	1/1:30,1:31:67.09:791,67,0	1/1:17,3:20:42.62:408,43,0	1/1:27,3:29:62.03:696,62,0	1/1:21,1:22:62.95:762,63,0	1/1:27,1:28:39.44:430,39,0	1/1:16,1:17:29.99:392,30,0	1/1:14,5:19:36.09:544,36,0	1/1:25,2:26:59.11:597,59,0	1/1:26,2:28:21.34:274,21,0	0/0:22,0:22:54.19:0,54,1358	0/0:15,0:15:33.11:0,33,798	0/0:25,0:24:72.21:0,72,1722	1/1:19,2:21:59.81:652,60,0	1/1:28,3:31:80.66:943,81,0	1/1:21,4:25:54.38:660,54,0	1/1:3,0:3:0.11:32,0,0
chr10	61763292	.	C	CCA	1109.89	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-7.863;DP=730;FS=15.546;HRun=0;HaplotypeScore=90.9705;InbreedingCoeff=0.7708;MQ=63.37;MQ0=0;MQRankSum=0.040;QD=34.68;ReadPosRankSum=-5.354;VQSLOD=3.1019;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,114,1423	0/0:9,0:9:24.06:0,24,290	0/0:12,0:9:1.86:0,2,96	0/0:19,0:16:29.72:0,30,317	0/0:36,0:36:84.27:0,84,1078	0/0:29,0:29:75.24:0,75,965	0/0:38,0:38:96.29:0,96,1208	1/1:7,25:32:75.23:1205,75,0	0/0:24,0:24:69.21:0,69,873	0/0:34,0:34:93.29:0,93,1183	0/0:25,0:25:72.22:0,72,913	0/0:22,0:22:51.16:0,51,653	0/0:22,0:22:60.15:0,60,753	0/0:23,0:23:63.19:0,63,796	0/0:34,0:34:90.27:0,90,1129	0/0:19,0:19:48.16:0,48,617	0/0:30,0:30:90.28:0,90,1144	0/0:23,0:23:69.22:0,69,886	0/0:19,0:19:48.16:0,48,617	0/0:28,0:28:58.43:0,58,736	0/0:21,0:21:7.32:0,7,594	0/0:26,0:26:72.23:0,72,924	0/0:21,0:21:54.18:0,54,694	0/0:35,0:35:99:0,99,1238	0/0:28,0:28:81.24:0,81,1016	0/0:31,0:31:75.24:0,75,965	0/0:38,0:38:99:0,108,1373	0/0:8,0:8:24.08:0,24,308
chr10	61765552	.	C	CT	1913.48	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-9.512;DP=715;FS=3.513;HRun=3;HaplotypeScore=104.8980;InbreedingCoeff=0.9886;MQ=82.67;MQ0=0;MQRankSum=1.455;QD=44.50;ReadPosRankSum=-5.397;VQSLOD=1.2821;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,123,1720	0/0:8,0:8:24.08:0,24,335	0/0:25,0:25:17.92:0,18,863	0/0:19,0:19:26.23:0,26,456	0/0:22,0:22:66.20:0,66,904	0/0:20,0:20:60.19:0,60,822	0/0:24,0:24:69.23:0,69,964	1/1:0,43:43:99:2008,129,0	0/0:35,0:35:99:0,105,1466	0/0:21,0:21:63.21:0,63,879	0/0:19,0:19:54.18:0,54,755	0/0:30,0:30:90.30:0,90,1257	0/0:30,0:30:84.28:0,84,1174	0/0:25,0:25:72.23:0,72,988	0/0:39,0:39:99:0,114,1590	0/0:31,0:31:84.26:0,84,1139	0/0:25,0:25:75.25:0,75,1049	0/0:18,0:18:51.17:0,51,713	0/0:23,0:23:69.21:0,69,946	0/0:20,0:20:57.19:0,57,796	0/0:49,0:49:99:0,147,2029	0/0:20,0:20:60.19:0,60,825	0/0:20,0:20:57.18:0,57,780	0/0:26,0:26:78.26:0,78,1090	0/0:18,0:18:54.18:0,54,755	0/0:24,0:24:69.22:0,69,949	0/0:26,0:26:75.25:0,75,1046	0/0:13,0:13:39.13:0,39,545
chr10	61765765	.	A	AG	13122.29	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=-10.636;DP=667;FS=3.344;HRun=8;HaplotypeScore=64.7434;InbreedingCoeff=0.9986;MQ=73.65;MQ0=0;MQRankSum=-3.414;QD=24.95;ReadPosRankSum=2.719;VQSLOD=5.8059;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,1:35:37.21:213,37,0	1/1:1,10:11:27.08:312,27,0	0/0:12,0:11:26.88:0,27,225	0/0:13,0:13:29.99:0,30,268	1/1:5,20:25:60.18:690,60,0	1/1:3,17:20:45.13:520,45,0	1/1:7,19:27:44.96:497,45,0	0/0:5,0:23:28.99:0,29,86	0/0:20,0:20:54.02:0,54,494	1/1:5,19:24:54.16:621,54,0	1/1:1,21:22:60.18:692,60,0	1/1:4,18:22:36.11:416,36,0	1/1:7,18:25:48.14:554,48,0	1/1:5,25:30:72.21:829,72,0	1/1:1,20:21:57.17:658,57,0	1/1:2,18:20:51.15:588,51,0	1/1:4,45:49:99:1453,126,0	1/1:4,15:19:23.68:519,24,0	1/1:2,15:17:45.12:509,45,0	1/1:3,24:27:66.19:756,66,0	1/1:8,33:41:78.23:900,78,0	0/0:32,0:32:87.04:0,87,795	0/0:16,0:16:39:0,39,352	0/0:25,0:25:69.04:0,69,631	1/1:4,16:20:45.13:519,45,0	1/1:6,26:32:81.17:907,81,0	1/1:2,20:22:60.18:692,60,0	1/1:7,10:17:24.07:277,24,0
chr10	61767223	.	CACAGAGAGAGAGAG	C	888.50	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-3.834;DP=527;FS=0.000;HRun=0;HaplotypeScore=186.9377;InbreedingCoeff=0.8795;MQ=48.10;MQ0=20;MQRankSum=1.432;QD=15.06;ReadPosRankSum=0.734;VQSLOD=2.5567;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:20:21.82:0,22,673	0/0:10,0:9:20.65:0,21,170	0/0:20,0:6:17.85:0,18,143	0/0:11,0:5:4.96:0,5,56	0/0:11,0:11:26.89:0,27,211	0/0:13,0:12:26.96:0,27,263	0/0:27,0:26:28.53:0,29,247	0/0:36,0:32:65.76:0,66,533	1/1:3,0:14:12.04:421,12,0	0/0:23,0:22:54.50:0,54,711	0/0:6,0:6:12:0,12,141	0/0:13,0:13:23.73:0,24,451	0/0:10,0:9:18.03:0,18,491	0/0:15,0:15:26.89:0,27,586	0/0:20,0:19:33.03:0,33,672	0/0:20,0:20:44.90:0,45,770	0/0:24,0:22:53.96:0,54,1229	0/0:24,0:22:54.09:0,54,1247	0/0:15,0:13:32.21:0,32,332	0/0:22,0:22:38.62:0,39,389	0/0:23,0:21:26.99:0,27,568	1/1:21,0:21:44.51:346,45,0	0/0:8,19:27:5.06:0,5,21	1/1:24,0:21:32.89:259,33,0	0/0:15,0:14:14.05:0,14,356	0/0:34,0:34:96.09:0,96,1531	0/0:16,0:16:40.17:0,40,560	0/0:11,0:10:23.92:0,24,251
chr10	61767225	.	CAGAGAGAGAG	C	180.88	PASS	AB=0.963;AC=5;AF=0.114;AN=44;BaseQRankSum=3.994;DP=533;FS=3.694;HRun=0;HaplotypeScore=159.9134;InbreedingCoeff=0.4858;MQ=47.54;MQ0=20;MQRankSum=-2.729;QD=3.01;ReadPosRankSum=0.200;VQSLOD=2.5599;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:22:12.04:0,12,261	./.	./.	./.	./.	0/0:13,0:12:3.01:0,3,36	0/0:27,0:26:1.25:0,1,3	0/0:38,0:34:6.02:0,6,74	1/1:13,0:13:12.04:264,12,0	0/0:25,0:24:18.01:0,18,294	0/0:6,0:7:0:0,0,0	0/0:13,0:13:5.79:0,6,191	0/0:11,0:10:12.04:0,12,336	0/0:15,0:15:12.04:0,12,322	0/0:20,0:19:15.02:0,15,297	0/0:21,0:21:20.99:0,21,284	0/0:22,0:21:26.43:0,26,704	0/0:24,0:22:9.54:0,10,515	0/0:17,0:15:6.02:0,6,98	0/0:21,0:21:3.48:0,3,50	0/0:21,0:19:12.04:0,12,283	1/1:17,4:21:1.55:4,2,0	0/1:25,0:26:0:0,0,0	./.	0/0:16,0:15:6.02:0,6,97	0/0:34,0:34:27.05:0,27,635	0/0:16,0:16:9.92:0,10,184	./.
chr10	61767296	.	AAG	A	291.45	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.281;DP=602;FS=1.007;HRun=0;HaplotypeScore=122.6500;InbreedingCoeff=0.9859;MQ=76.30;MQ0=5;MQRankSum=-3.808;QD=26.50;ReadPosRankSum=-3.610;VQSLOD=3.5426;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:57.20:0,57,1148	0/0:13,0:13:39.13:0,39,792	0/0:38,1:27:23.22:0,23,1167	0/0:55,0:36:77.88:0,78,1305	0/0:19,0:19:57.20:0,57,1146	0/0:24,0:24:63.22:0,63,1247	0/0:22,1:23:66.22:0,66,1279	1/1:8,3:11:32.91:386,33,0	0/0:24,0:24:62.67:0,63,1108	0/0:20,0:20:58.75:0,59,1161	0/0:11,0:11:30.10:0,30,600	0/0:14,0:14:42.14:0,42,825	0/0:16,2:18:18.99:0,19,924	0/0:16,0:16:48.16:0,48,951	0/0:24,0:24:72.24:0,72,1415	0/0:20,0:20:60.21:0,60,1199	0/0:18,0:18:48.16:0,48,933	0/0:22,2:23:23.23:0,23,906	0/0:22,0:22:66.23:0,66,1267	0/0:19,0:19:54.18:0,54,1072	0/0:22,0:21:60.20:0,60,1171	0/0:16,0:16:42.14:0,42,853	0/0:23,0:23:54.19:0,54,1087	0/0:26,1:26:59.17:0,59,1189	0/0:24,0:24:69.24:0,69,1349	0/0:25,0:25:75.26:0,75,1518	0/0:23,0:23:69.22:0,69,1355	0/0:8,0:8:24.08:0,24,459
chr10	61769704	.	A	AT	22758.25	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=-16.717;DP=765;FS=8.157;HRun=1;HaplotypeScore=72.1059;InbreedingCoeff=0.9997;MQ=84.20;MQ0=0;MQRankSum=-4.123;QD=38.90;ReadPosRankSum=5.980;VQSLOD=4.9371;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,48:52:99:1932,129,0	1/1:1,10:11:30.06:424,30,0	0/0:19,0:19:54.14:0,54,663	0/0:27,0:26:69.03:0,69,852	1/1:0,30:31:93.31:1387,93,0	1/1:1,19:20:39.13:584,39,0	1/1:1,22:23:57.19:854,57,0	0/0:32,0:32:84.23:0,84,1029	0/0:26,0:26:78.23:0,78,983	1/1:3,23:26:69.19:990,69,0	1/1:2,27:29:75.25:1123,75,0	1/1:1,24:25:57.19:854,57,0	1/1:0,21:21:51.17:764,51,0	1/1:0,28:28:72.24:1078,72,0	1/1:0,30:30:87.29:1303,87,0	1/1:0,34:34:84.28:1259,84,0	1/1:0,22:22:63.21:944,63,0	1/1:0,28:28:72.24:1079,72,0	1/1:2,21:23:66.22:975,66,0	1/1:0,31:31:90.21:1297,90,0	1/1:1,49:50:99:1888,126,0	0/0:20,0:20:60.18:0,60,757	0/0:15,0:15:39.11:0,39,491	0/0:41,0:41:99:0,114,1448	1/1:1,32:33:87.29:1303,87,0	1/1:0,26:26:78.22:1103,78,0	1/1:1,31:31:81.27:1213,81,0	1/1:1,9:10:27.09:404,27,0
chr10	61772780	.	C	CTGAT	17136.89	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=-9.437;DP=682;FS=5.435;HRun=0;HaplotypeScore=91.9279;InbreedingCoeff=0.9315;MQ=62.62;MQ0=9;MQRankSum=2.176;QD=33.15;ReadPosRankSum=0.689;VQSLOD=4.2470;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:12,17:31:33.52:967,34,0	1/1:5,5:10:15.05:321,15,0	0/0:22,0:14:5.99:0,6,68	0/0:24,0:18:12.02:0,12,139	1/1:13,2:31:27.05:450,27,0	1/1:10,21:32:51.18:1206,51,0	1/1:7,16:24:36.11:769,36,0	0/0:31,0:29:2.74:0,3,12	0/0:8,0:15:15.02:0,15,140	1/1:17,17:33:54.19:1257,54,0	1/1:6,14:21:36.12:850,36,0	1/1:6,12:18:24.08:568,24,0	1/1:9,16:26:33.11:781,33,0	1/1:3,11:15:24.08:567,24,0	1/1:5,21:28:42.14:993,42,0	1/1:7,11:18:30.10:709,30,0	1/1:8,21:32:54.14:1226,54,0	1/1:5,8:13:18.06:426,18,0	1/1:15,6:18:21.07:481,21,0	1/1:10,10:22:30.06:658,30,0	1/1:10,12:22:30.10:684,30,0	0/0:19,0:19:24.07:0,24,353	0/0:23,0:23:42.14:0,42,657	0/0:30,0:30:48.15:0,48,723	1/1:9,13:22:36.12:852,36,0	1/1:13,21:35:66.21:1508,66,0	1/1:16,21:37:51.03:1156,51,0	1/1:9,12:22:30.10:709,30,0
chr10	61773080	.	GA	G	417.96	PASS	AB=0.862;AC=10;AF=0.179;AN=56;BaseQRankSum=4.501;DP=553;FS=2.554;HRun=15;HaplotypeScore=72.3197;InbreedingCoeff=0.2091;MQ=54.75;MQ0=21;MQRankSum=1.161;QD=2.82;ReadPosRankSum=4.422;VQSLOD=-0.3242;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,2:39:1.88:0,2,327	0/1:12,1:13:14.54:15,0,125	0/0:6,0:1:1.55:0,2,4	0/0:8,1:5:7.49:0,7,46	0/0:21,1:22:19.47:0,19,267	0/1:16,3:17:11.58:12,0,148	0/0:26,1:26:21.79:0,22,319	0/0:6,0:16:34.94:0,35,195	0/0:12,0:12:8.99:0,9,76	0/0:19,0:20:29.14:0,29,279	0/0:15,1:16:10.69:0,11,205	0/0:24,2:25:19.62:0,20,281	0/0:20,0:20:27.86:0,28,247	0/0:15,0:16:7.30:0,7,113	0/0:22,0:22:29.98:0,30,260	0/0:5,0:5:6:0,6,53	0/0:41,4:44:54.73:0,55,606	0/0:20,0:20:38.29:0,38,300	0/1:15,2:14:17.61:18,0,96	0/0:14,1:16:1.16:0,1,94	0/0:9,0:9:1.32:0,1,67	1/1:5,7:11:20.66:134,21,0	0/1:14,8:20:1.94:95,0,2	1/1:8,16:24:20.94:262,21,0	0/1:21,3:25:22.70:23,0,213	0/0:23,0:23:21.43:0,21,173	0/0:21,1:22:4.61:0,5,130	0/1:14,1:14:6.81:7,0,84
chr10	61774380	.	GGGGA	G	864.52	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.940;DP=698;FS=18.522;HRun=0;HaplotypeScore=115.1334;InbreedingCoeff=0.9998;MQ=76.67;MQ0=0;MQRankSum=-6.752;QD=43.23;ReadPosRankSum=-1.439;VQSLOD=2.6398;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,114,2402	0/0:16,0:16:45.14:0,45,1074	0/0:17,0:17:48.16:0,48,982	0/0:19,0:19:51.15:0,51,1049	0/0:32,0:32:90.26:0,90,2098	0/0:16,0:16:48.16:0,48,1199	0/0:25,0:25:63.19:0,63,1479	1/1:3,17:20:54.17:959,54,0	0/0:27,0:27:75.23:0,75,1764	0/0:31,0:31:90.29:0,90,2107	0/0:17,0:17:47.87:0,48,1024	0/0:33,0:33:93.28:0,93,2192	0/0:19,0:19:51.12:0,51,1132	0/0:30,0:30:87.27:0,87,2059	0/0:39,0:39:99:0,117,2713	0/0:23,0:23:63.18:0,63,1485	0/0:35,0:35:99:0,102,2271	0/0:27,0:27:75.22:0,75,1818	0/0:17,0:17:45.13:0,45,1004	0/0:20,0:20:57.17:0,57,1357	0/0:34,0:34:96.23:0,96,2075	0/0:29,0:29:78.26:0,78,1916	0/0:17,0:17:48.62:0,49,1136	0/0:30,0:30:87.26:0,87,1999	0/0:20,0:20:57.20:0,57,1409	0/0:32,0:32:90.29:0,90,2107	0/0:18,0:18:54.16:0,54,1238	0/0:13,0:13:36.12:0,36,869
chr10	61777292	.	C	CCACACACACACAT	4646.08	PASS	AB=0.605;AC=30;AF=0.536;AN=56;BaseQRankSum=6.312;DP=694;FS=0.387;HRun=0;HaplotypeScore=243.3475;InbreedingCoeff=-0.3303;MQ=61.45;MQ0=7;MQRankSum=-9.575;QD=7.91;ReadPosRankSum=2.538;VQSLOD=3.3922;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:5,0:36:34.18:164,0,34	1/1:1,0:8:6.02:65,6,0	0/0:26,0:16:23.55:0,24,538	0/0:29,0:11:9.02:0,9,324	0/1:1,0:20:31.38:84,0,31	0/1:4,0:19:7.21:150,0,7	0/1:7,0:32:20.49:129,0,20	0/0:28,0:28:78.64:0,79,1408	1/1:1,1:28:12.04:632,12,0	0/1:9,0:35:91.07:318,0,91	0/1:7,0:20:33.45:80,0,33	0/1:10,0:39:61.93:529,0,62	0/1:2,0:22:25.49:210,0,25	1/1:5,0:32:16.01:303,16,0	0/1:2,0:31:34.76:327,0,35	0/1:4,0:22:9.17:197,0,9	0/1:2,0:20:35.79:83,0,36	0/1:7,0:24:26.29:204,0,26	0/1:2,0:8:34.80:37,0,35	1/1:4,0:26:7.72:215,8,0	0/1:7,0:39:30.93:72,0,31	0/1:25,0:25:43.62:44,0,838	0/0:24,0:24:20.66:0,21,918	0/1:28,0:28:85.70:86,0,1141	0/1:4,0:16:19.15:185,0,19	0/1:8,0:28:93.63:262,0,94	1/1:3,0:20:9.49:207,9,0	1/1:0,0:6:6.02:65,6,0
chr10	61777294	.	C	CA	1045.39	PASS	AB=0.988;AC=32;AF=0.571;AN=56;BaseQRankSum=13.175;DP=576;FS=1.294;HRun=1;HaplotypeScore=131.4765;InbreedingCoeff=0.2103;MQ=64.79;MQ0=7;MQRankSum=-9.214;QD=2.56;ReadPosRankSum=1.935;VQSLOD=-0.2239;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:25,1:26:15.16:56,0,15	1/1:7,0:7:5.27:21,5,0	0/0:26,0:17:46.19:0,46,528	0/0:29,0:12:29.49:0,29,322	1/1:19,0:19:17.31:70,17,0	1/1:13,0:13:10.32:39,10,0	0/1:26,0:26:18.30:35,0,18	0/0:30,0:30:84.16:0,84,1009	1/1:22,0:22:10.54:43,11,0	0/1:21,0:20:20:20,0,210	1/1:15,0:15:0.97:55,1,0	1/1:29,1:30:40.51:164,41,0	1/1:20,0:20:16.88:78,17,0	0/1:26,1:27:5.09:90,0,5	1/1:27,0:27:29.34:135,29,0	0/1:19,0:19:25.97:51,0,26	0/1:15,0:15:12.90:28,0,13	0/1:19,1:20:16.87:51,0,17	0/0:7,0:7:1.70:0,2,161	1/1:20,0:20:15.82:103,16,0	0/1:28,0:28:11.81:12,0,67	0/0:25,0:25:70.05:0,70,866	0/0:23,0:23:63.17:0,63,803	0/0:27,0:27:81.22:0,81,1038	1/1:12,0:12:11.36:80,11,0	0/1:19,0:19:16.33:16,0,254	1/1:16,0:16:19.70:73,20,0	0/1:7,0:7:12.78:13,0,16
chr10	61778252	.	T	TCA	1798.10	PASS	AB=1.000;AC=47;AF=0.940;AN=50;BaseQRankSum=1.753;DP=672;FS=0.000;HRun=0;HaplotypeScore=177.5302;InbreedingCoeff=0.2658;MQ=66.19;MQ0=7;MQRankSum=-0.315;QD=3.17;ReadPosRankSum=-0.944;VQSLOD=2.3607;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:35,0:34:8.96:70,9,0	./.	./.	./.	1/1:17,10:26:3:26,3,0	1/1:22,0:22:8.80:86,9,0	1/1:33,0:33:0.41:1,0,0	1/1:30,0:28:6.92:29,7,0	1/1:29,0:30:28.85:232,29,0	1/1:24,0:24:22.95:189,23,0	0/1:10,0:10:0:0,0,0	1/1:33,0:33:2.82:23,3,0	1/1:25,0:25:17.48:126,17,0	1/1:26,0:27:8.94:80,9,0	1/1:33,0:34:13.62:105,14,0	1/1:24,0:24:8.45:76,8,0	1/1:16,0:21:13.58:115,14,0	1/1:15,0:16:14.56:122,15,0	1/1:16,0:15:11.83:92,12,0	1/1:19,0:19:0.43:1,0,0	1/1:27,0:26:3:25,3,0	1/1:18,0:17:5.99:48,6,0	0/0:17,0:14:0.44:0,0,1	1/1:30,0:29:4.10:36,4,0	1/1:17,0:17:2.54:24,3,0	1/1:21,0:20:20.94:213,21,0	1/1:17,0:16:2.84:14,3,0	1/1:9,0:9:15.89:138,16,0
chr10	61778289	.	T	TACAC	9705.51	PASS	AB=1.000;AC=48;AF=0.857;AN=56;BaseQRankSum=3.296;DP=689;FS=6.906;HRun=0;HaplotypeScore=156.3552;InbreedingCoeff=0.6792;MQ=52.37;MQ0=11;MQRankSum=-1.309;QD=15.96;ReadPosRankSum=2.186;VQSLOD=3.8122;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:31,0:30:30:449,30,0	1/1:7,0:7:9.03:128,9,0	0/0:25,0:7:17.38:0,17,213	0/0:25,0:11:19.98:0,20,305	1/1:22,0:21:18.04:262,18,0	1/1:20,0:20:21.53:367,22,0	1/1:13,24:42:5.61:86,6,0	0/0:31,0:28:44.26:0,44,771	1/1:33,1:34:54.12:872,54,0	1/1:28,0:28:45.14:688,45,0	0/1:7,0:7:0:0,0,0	1/1:39,0:39:57.03:838,57,0	1/1:20,0:20:19.97:320,20,0	1/1:31,0:31:45.34:630,45,0	1/1:31,1:32:33.10:526,33,0	1/1:22,0:23:24.05:328,24,0	1/1:20,1:20:23.38:289,23,0	1/1:18,1:19:42.14:723,42,0	1/1:27,0:25:27.08:402,27,0	1/1:19,0:19:11.68:82,12,0	1/1:40,0:39:54.10:805,54,0	1/1:16,0:15:8.74:39,9,0	1/1:13,0:10:1.62:5,2,0	0/1:40,0:39:66.14:119,0,66	1/1:20,0:20:21.07:365,21,0	1/1:25,0:25:51.47:697,51,0	1/1:15,0:14:4.77:75,5,0	1/1:17,0:17:39.11:611,39,0
chr10	61778292	.	A	ACACA	9733.08	PASS	AB=1.000;AC=48;AF=0.857;AN=56;BaseQRankSum=2.943;DP=684;FS=8.196;HRun=0;HaplotypeScore=158.9920;InbreedingCoeff=0.6768;MQ=54.76;MQ0=8;MQRankSum=-1.022;QD=16.11;ReadPosRankSum=2.435;VQSLOD=3.6109;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:29:30:449,30,0	1/1:7,0:7:9.03:128,9,0	0/0:26,0:8:17.38:0,17,213	0/0:26,0:13:19.98:0,20,305	1/1:21,0:21:18.04:262,18,0	1/1:20,0:20:21.53:367,22,0	1/1:40,0:40:5.61:86,6,0	0/0:28,0:25:44.26:0,44,771	1/1:36,0:36:54.12:872,54,0	1/1:29,0:29:45.14:688,45,0	0/1:7,0:7:0:0,0,0	1/1:43,0:43:57.03:838,57,0	1/1:18,0:18:19.97:320,20,0	1/1:31,0:31:45.34:630,45,0	1/1:30,0:30:33.10:526,33,0	1/1:25,0:25:27.06:368,27,0	1/1:24,0:23:16.14:279,16,0	1/1:19,0:19:42.14:723,42,0	1/1:24,0:23:27.08:402,27,0	1/1:16,0:16:11.21:81,11,0	1/1:40,0:39:54.10:805,54,0	1/1:17,0:16:8.74:39,9,0	1/1:13,0:10:1.62:5,2,0	0/1:40,0:39:66.14:118,0,66	1/1:18,0:18:21.07:365,21,0	1/1:25,0:25:51:695,51,0	1/1:8,6:14:4.77:75,5,0	1/1:17,0:17:39.11:611,39,0
chr10	61779849	.	A	AC	6126.35	PASS	AB=0.618;AC=31;AF=0.554;AN=56;BaseQRankSum=0.202;DP=635;FS=13.145;HRun=9;HaplotypeScore=105.2379;InbreedingCoeff=0.0169;MQ=83.33;MQ0=0;MQRankSum=-3.200;QD=12.53;ReadPosRankSum=0.029;VQSLOD=2.9699;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:16,23:39:30.08:332,30,0	1/1:0,6:6:6.02:66,6,0	0/0:16,0:16:11.94:0,12,104	0/0:24,0:24:31.30:0,31,327	0/1:9,7:16:60.37:81,0,60	1/1:3,14:17:30.08:331,30,0	1/1:6,14:20:0.81:239,1,0	0/1:11,9:20:22.02:222,0,22	0/0:34,0:34:86.90:0,87,743	0/1:6,16:22:30.03:365,0,30	0/1:3,4:7:19.68:27,0,20	0/1:11,15:26:36.03:318,0,36	0/1:8,17:25:39.04:293,0,39	0/1:12,20:33:7.04:364,0,7	0/1:8,28:36:38.01:531,0,38	1/1:6,16:22:7.03:305,7,0	1/1:2,22:24:31.11:571,31,0	0/1:19,29:48:99:423,0,158	1/1:8,7:15:24.05:254,24,0	1/1:6,12:18:24.06:265,24,0	0/1:15,17:32:42.07:263,0,42	0/0:18,0:19:46.99:0,47,390	0/0:19,0:19:47.98:0,48,416	0/0:34,0:34:18.32:0,18,611	1/1:5,10:16:3.86:254,4,0	0/1:8,14:22:9.98:356,0,10	0/1:6,12:18:5.31:178,0,5	0/1:1,6:7:13.99:88,0,14
chr10	61780863	.	G	GAAA	1863.10	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-8.511;DP=601;FS=14.522;HRun=8;HaplotypeScore=156.6657;InbreedingCoeff=0.9929;MQ=61.34;MQ0=12;MQRankSum=-0.577;QD=19.41;ReadPosRankSum=0.570;VQSLOD=0.1777;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:90.15:0,90,1157	0/0:8,0:8:21.06:0,21,275	0/0:13,0:12:35.90:0,36,424	0/0:8,0:6:14.35:0,14,146	0/0:25,0:25:68.82:0,69,844	0/0:19,0:19:54.17:0,54,708	0/0:26,0:22:60.18:0,60,788	1/1:9,0:34:34.13:90,34,0	0/0:20,0:18:54.15:0,54,678	0/0:34,0:34:96.27:0,96,1215	0/0:18,0:18:51.16:0,51,665	0/0:20,0:20:51.08:0,51,618	0/0:17,0:17:38.78:0,39,511	0/0:15,0:15:42.13:0,42,549	0/0:24,0:24:66.19:0,66,836	0/0:18,0:18:45.04:0,45,588	0/0:34,0:32:63.17:0,63,792	0/0:35,0:34:93.30:0,93,1219	0/0:20,0:20:57.15:0,57,705	0/0:24,0:23:57.15:0,57,731	0/0:16,0:16:42.14:0,42,550	1/1:3,16:20:36.08:686,36,0	1/1:0,17:18:23.96:477,24,0	1/1:4,16:18:39.13:770,39,0	0/0:27,0:27:63.15:0,63,812	0/0:19,0:19:51.15:0,51,668	0/0:19,0:19:54.13:0,54,688	0/0:13,0:13:36.09:0,36,456
chr10	61781141	.	GA	G	1928.59	PASS	AB=0.908;AC=12;AF=0.214;AN=56;BaseQRankSum=1.240;DP=633;FS=3.683;HRun=11;HaplotypeScore=113.2910;InbreedingCoeff=0.7639;MQ=69.53;MQ0=2;MQRankSum=-2.369;QD=13.58;ReadPosRankSum=-1.263;VQSLOD=3.1809;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:61.04:0,61,641	0/0:8,0:8:18.02:0,18,181	0/1:13,2:13:12.64:13,0,69	0/0:13,0:13:1.23:0,1,82	0/0:20,1:22:23.36:0,23,430	0/0:22,0:22:51.11:0,51,536	0/0:16,1:17:3.36:0,3,260	1/1:9,15:24:49.73:399,50,0	1/1:6,22:30:78.97:627,79,0	0/0:35,1:37:71.55:0,72,930	0/0:10,0:10:27.06:0,27,282	0/0:28,1:30:32.33:0,32,527	0/0:18,0:19:44.91:0,45,440	0/0:29,0:28:72.09:0,72,727	0/0:31,0:32:71.98:0,72,729	0/1:12,1:14:0.65:1,0,176	0/0:29,0:29:66.10:0,66,677	0/0:27,1:28:53.52:0,54,759	0/0:20,1:21:23.44:0,23,439	0/0:26,0:26:63.05:0,63,638	0/0:33,0:33:69.14:0,69,710	1/1:3,18:22:58.97:474,59,0	1/1:6,13:19:35.92:295,36,0	1/1:4,14:18:35.95:295,36,0	0/0:19,0:18:48.11:0,48,506	0/0:28,0:28:60.11:0,60,618	0/0:24,1:25:32.93:0,33,535	0/0:11,0:11:27.07:0,27,288
chr10	61781172	.	C	CAA	17149.28	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-4.331;DP=610;FS=0.000;HRun=8;HaplotypeScore=89.4402;InbreedingCoeff=0.9797;MQ=69.50;MQ0=3;MQRankSum=-6.589;QD=29.22;ReadPosRankSum=3.305;VQSLOD=4.8307;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,27:28:75.25:1168,75,0	1/1:0,10:10:30.10:476,30,0	0/0:13,0:14:29.80:0,30,309	0/0:9,0:9:13.26:0,13,137	1/1:5,22:30:69.18:1034,69,0	1/1:1,19:20:45.15:714,45,0	1/1:0,17:18:47.65:723,48,0	1/1:5,0:24:45.40:167,45,0	1/1:6,0:28:55.40:206,55,0	1/1:6,28:37:83.70:1198,84,0	1/1:2,11:13:33.08:496,33,0	1/1:4,21:25:42.14:667,42,0	1/1:0,12:14:20.86:333,21,0	1/1:2,28:29:63.21:999,63,0	1/1:6,19:25:36.12:572,36,0	1/1:0,11:12:20.56:294,21,0	1/1:4,20:24:42.14:667,42,0	1/1:5,25:31:71.73:1103,72,0	1/1:5,22:26:63.17:948,63,0	1/1:3,21:25:63.17:946,63,0	1/1:2,18:21:51.17:809,51,0	1/1:4,0:22:37.90:140,38,0	1/1:3,0:19:43.64:178,44,0	1/1:0,0:11:20.43:80,20,0	1/1:1,15:16:36.12:571,36,0	1/1:3,31:36:90.24:1325,90,0	1/1:3,19:24:53.84:857,54,0	1/1:0,11:15:30.10:476,30,0
chr10	61781563	.	C	CG	953.49	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-4.222;DP=674;FS=2.651;HRun=3;HaplotypeScore=63.8139;InbreedingCoeff=0.9999;MQ=82.84;MQ0=0;MQRankSum=-2.638;QD=35.31;ReadPosRankSum=2.034;VQSLOD=4.4241;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:84.26:0,84,1007	0/0:17,0:17:51.16:0,51,611	0/0:17,0:17:39.79:0,40,434	0/0:21,0:21:48.08:0,48,541	0/0:31,0:31:84.26:0,84,1007	0/0:22,0:22:63.18:0,63,744	0/0:23,0:23:69.21:0,69,828	0/0:24,0:24:66.19:0,66,774	1/1:2,25:27:75.25:1048,75,0	0/0:42,0:42:99:0,114,1354	0/0:17,0:17:51.16:0,51,612	0/0:27,0:27:81.24:0,81,960	0/0:22,0:22:63.18:0,63,744	0/0:25,0:25:72.22:0,72,863	0/0:25,0:25:69.20:0,69,817	0/0:21,0:21:63.18:0,63,744	0/0:32,0:32:93.29:0,93,1115	0/0:22,0:22:63.19:0,63,755	0/0:28,0:28:75.20:0,75,883	0/0:21,0:21:57.17:0,57,684	0/0:25,0:25:69.21:0,69,826	0/0:18,0:18:51.11:0,51,592	0/0:22,0:22:66.20:0,66,791	0/0:34,0:33:96.29:0,96,1152	0/0:15,0:15:39.12:0,39,468	0/0:26,0:26:72.18:0,72,847	0/0:21,0:21:57.17:0,57,680	0/0:17,0:17:51.16:0,51,611
chr10	61782725	.	T	TG	31566.39	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=3.415;DP=779;FS=0.517;HRun=0;HaplotypeScore=137.6830;InbreedingCoeff=0.9953;MQ=88.63;MQ0=0;MQRankSum=-12.200;QD=43.90;ReadPosRankSum=7.341;VQSLOD=3.3938;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,57:57:99:2590,163,0	1/1:0,7:7:18.06:288,18,0	0/0:31,0:31:74.19:0,74,1089	0/0:29,0:28:81.22:0,81,1090	1/1:1,16:17:45.15:719,45,0	1/1:0,15:15:39.13:623,39,0	1/1:1,32:33:93.32:1486,93,0	1/1:0,39:39:99:1754,114,0	1/1:0,30:30:84.29:1342,84,0	1/1:1,19:20:60.19:934,60,0	1/1:0,19:19:54.18:863,54,0	1/1:1,39:40:99:1580,99,0	1/1:0,22:22:54.18:863,54,0	1/1:0,22:22:54.18:862,54,0	1/1:1,37:38:99:1582,99,0	1/1:0,30:30:81.28:1294,81,0	1/1:0,40:40:99:1726,108,0	1/1:0,20:20:60.20:959,60,0	1/1:0,16:16:48.16:767,48,0	1/1:0,16:16:48.16:767,48,0	1/1:3,58:61:99:2734,172,0	1/1:0,19:19:57.19:911,57,0	1/1:1,23:24:66.22:1036,66,0	1/1:1,35:36:90.31:1439,90,0	1/1:0,35:35:99:1621,102,0	1/1:1,30:31:87.30:1388,87,0	1/1:0,23:23:63.21:1006,63,0	1/1:0,9:9:27.09:432,27,0
chr10	61783350	.	GAGGAGCAGCAGCAGCAGCAGCAGC	G	2618.24	PASS	AB=1.000;AC=12;AF=0.214;AN=56;BaseQRankSum=6.774;DP=487;FS=12.880;HRun=0;HaplotypeScore=277.8666;InbreedingCoeff=-0.1124;MQ=45.18;MQ0=9;MQRankSum=-5.332;QD=12.23;ReadPosRankSum=4.501;VQSLOD=1.0192;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:56.79:0,57,453	0/1:9,0:9:99:124,0,147	0/0:31,0:11:22.04:0,22,190	0/0:26,0:8:7.27:0,7,213	0/0:8,0:7:16.24:0,16,133	0/1:12,0:12:90.94:131,0,91	0/0:20,0:20:41.77:0,42,327	0/0:15,0:13:32.45:0,32,301	1/1:0,18:18:6.02:389,6,0	0/0:15,0:14:38.90:0,39,339	0/0:6,0:6:15:0,15,133	0/1:16,0:16:99:126,0,131	0/1:29,0:28:99:102,0,275	0/1:25,0:25:99:272,0,125	0/1:26,0:26:89.89:556,0,90	0/1:28,0:28:99:704,0,178	0/1:24,0:24:99:104,0,248	0/1:18,0:18:99:122,0,124	0/0:17,0:15:41.63:0,42,319	0/0:6,0:6:11.98:0,12,100	0/0:25,0:24:38.94:0,39,327	0/0:6,0:6:9.40:0,9,99	0/0:9,0:8:14.93:0,15,118	0/0:33,0:32:15.87:0,16,443	0/0:12,0:11:29.97:0,30,254	0/0:12,0:12:32.94:0,33,277	0/1:9,0:9:37.97:141,0,38	0/0:11,0:11:32.75:0,33,248
chr10	61783353	.	GAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGC	G	4710.01	PASS	AB=1.000;AC=25;AF=0.781;AN=32;BaseQRankSum=2.817;DP=466;FS=1.402;HRun=0;HaplotypeScore=319.6129;InbreedingCoeff=0.4602;MQ=45.27;MQ0=6;MQRankSum=-1.861;QD=18.76;ReadPosRankSum=3.772;VQSLOD=3.1034;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	1/1:6,2:8:3.01:251,3,0	./.	0/0:25,0:8:10.85:0,11,346	./.	1/1:10,1:11:3.01:251,3,0	0/1:19,0:19:0:0,0,0	0/0:14,0:12:6.02:0,6,233	1/1:18,0:18:6.02:80,6,0	./.	./.	1/1:10,6:16:3.01:251,3,0	1/1:22,7:28:2.66:251,3,0	1/1:13,10:23:6.02:502,6,0	1/1:15,11:26:12.04:988,12,0	1/1:11,18:29:14.97:1257,15,0	1/1:15,9:24:6.02:323,6,0	1/1:8,9:17:3.01:251,3,0	./.	./.	1/1:24,0:23:2.98:52,3,0	./.	./.	0/0:20,0:30:20.69:0,21,807	./.	./.	1/1:3,4:7:3.01:251,3,0	./.
chr10	61784828	.	A	AACC	26524.87	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=13.565;DP=666;FS=0.680;HRun=0;HaplotypeScore=162.4399;InbreedingCoeff=0.9954;MQ=76.73;MQ0=1;MQRankSum=-15.066;QD=54.58;ReadPosRankSum=3.200;VQSLOD=6.3382;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,35:41:99:2417,108,0	1/1:1,4:6:15.05:352,15,0	0/0:27,0:27:80.35:0,80,1173	0/0:27,0:27:70.12:0,70,1166	1/1:1,28:29:32.86:780,33,0	1/1:1,18:19:57.15:1281,57,0	1/1:4,19:23:69.24:1626,69,0	0/0:32,0:32:93.31:0,93,1615	0/0:22,0:22:66.23:0,66,1159	1/1:6,14:22:51.15:1089,51,0	1/1:3,12:15:18.02:373,18,0	1/1:2,30:35:90.31:2095,90,0	1/1:1,12:13:33.11:779,33,0	1/1:3,19:23:54.19:1251,54,0	1/1:3,23:26:69.24:1577,69,0	1/1:1,29:30:90.27:2059,90,0	1/1:3,15:17:36.12:836,36,0	1/1:3,9:13:33.07:718,33,0	1/1:8,19:27:78.25:1768,78,0	1/1:5,20:24:41.91:881,42,0	1/1:3,27:29:60.18:1354,60,0	0/0:20,0:20:54.17:0,54,910	0/0:24,0:24:69.24:0,69,1217	0/0:28,0:28:84.27:0,84,1453	1/1:5,17:21:51.18:1199,51,0	1/1:4,26:31:87.30:2040,87,0	1/1:6,19:27:60.16:1341,60,0	1/1:0,10:10:30.10:709,30,0
chr10	61784967	.	AGG	A	25007.84	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=12.154;DP=814;FS=3.461;HRun=4;HaplotypeScore=104.9096;InbreedingCoeff=0.9999;MQ=85.49;MQ0=1;MQRankSum=-8.088;QD=40.53;ReadPosRankSum=6.359;VQSLOD=3.6991;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,59:61:99:2385,163,0	1/1:0,17:17:45.15:663,45,0	0/0:31,0:31:90.31:0,90,1677	0/0:22,0:22:62.55:0,63,1085	1/1:0,23:23:69.23:1016,69,0	1/1:1,25:26:72.24:1060,72,0	1/1:2,27:29:75.25:1105,75,0	0/0:21,0:21:54.19:0,54,1005	0/0:29,0:29:87.30:0,87,1630	1/1:1,44:44:99:1900,129,0	1/1:0,18:18:51.17:751,51,0	1/1:2,36:38:99:1497,102,0	1/1:3,23:26:69.23:1016,69,0	1/1:1,40:41:99:1753,120,0	1/1:2,21:22:60.20:883,60,0	1/1:0,25:25:63.21:928,63,0	1/1:0,30:30:90.30:1325,90,0	1/1:0,22:22:66.22:972,66,0	1/1:3,28:31:84.28:1236,84,0	1/1:0,20:20:51.17:751,51,0	1/1:2,44:46:99:1856,126,0	0/0:38,0:38:99:0,114,2119	0/0:20,0:20:60.21:0,60,1119	0/0:36,0:36:99:0,105,1959	1/1:1,20:21:60.20:884,60,0	1/1:2,39:41:99:1656,114,0	1/1:0,24:24:63.21:928,63,0	1/1:0,10:10:30.10:442,30,0
chr10	61788325	.	AAGAGAG	A	15651.74	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=0.389;DP=698;FS=2.709;HRun=0;HaplotypeScore=210.4273;InbreedingCoeff=0.9364;MQ=56.31;MQ0=17;MQRankSum=-7.184;QD=31.88;ReadPosRankSum=2.261;VQSLOD=4.4378;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:29,3:29:60.12:1071,60,0	1/1:4,4:8:21.03:346,21,0	0/0:26,0:10:5.75:0,6,117	0/0:52,0:23:13.60:0,14,212	1/1:23,9:31:67.71:1091,68,0	1/1:17,6:23:53.86:820,54,0	1/1:15,6:21:30.06:449,30,0	0/0:25,0:22:42.03:0,42,555	0/0:14,0:27:24.05:0,24,443	1/1:23,12:35:57.15:1104,57,0	1/1:13,2:14:27.06:433,27,0	1/1:19,2:19:51.08:883,51,0	1/1:24,3:26:51.12:951,51,0	1/1:16,5:21:42.10:749,42,0	1/1:30,6:36:66.20:1192,66,0	1/1:17,4:21:42.13:731,42,0	1/1:23,3:26:4.59:425,5,0	1/1:13,2:15:15.05:313,15,0	1/1:19,3:21:30.08:575,30,0	1/1:23,2:24:45.15:828,45,0	1/1:17,3:17:23.99:326,24,0	0/0:20,0:20:48.14:0,48,981	0/0:27,0:26:40.38:0,40,654	0/0:29,0:29:66.06:0,66,1267	1/1:20,3:21:47.60:820,48,0	1/1:25,5:30:58.75:1162,59,0	1/1:30,2:30:66.22:1310,66,0	1/1:4,0:3:8.98:75,9,0
chr10	61788347	.	GA	G	3069.99	PASS	AB=0.775;AC=20;AF=0.357;AN=56;BaseQRankSum=9.309;DP=717;FS=5.104;HRun=1;HaplotypeScore=221.7977;InbreedingCoeff=-0.5293;MQ=48.84;MQ0=22;MQRankSum=-8.094;QD=6.49;ReadPosRankSum=8.336;VQSLOD=0.4830;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:23,13:34:99:206,0,111	0/1:9,2:11:16.94:111,0,17	0/0:33,0:12:33.28:0,33,311	0/0:62,0:24:51.34:0,51,618	0/1:25,10:34:58.88:221,0,59	0/1:21,6:27:99:135,0,101	0/1:17,1:19:54.30:135,0,54	0/0:38,0:35:99:0,102,1306	0/0:26,0:26:45.12:0,45,540	0/1:20,4:24:99:118,0,105	0/1:10,5:14:6.11:129,0,6	0/1:16,7:25:55.17:209,0,55	0/1:13,8:21:33.47:180,0,33	0/1:13,8:21:29.40:229,0,29	0/1:15,13:28:42.23:254,0,42	0/1:15,7:23:99:216,0,127	0/1:20,5:25:84.94:85,0,179	0/1:12,2:14:39.50:40,0,111	0/1:8,4:11:11.87:83,0,12	0/1:13,10:22:82.26:190,0,82	0/1:16,1:16:32:32,0,51	0/0:26,0:26:75.21:0,75,974	0/0:26,0:24:51.04:0,51,632	0/0:29,0:29:81.12:0,81,957	0/1:17,9:23:28.96:188,0,29	0/1:20,11:32:99:165,0,266	0/1:15,14:29:30.18:306,0,30	0/0:4,0:3:9.02:0,9,100
chr10	61788350	.	AGAGGAAGAC	A	14837.46	PASS	AB=0.919;AC=42;AF=0.750;AN=56;BaseQRankSum=5.965;DP=725;FS=12.153;HRun=0;HaplotypeScore=266.8748;InbreedingCoeff=0.7452;MQ=48.30;MQ0=21;MQRankSum=-8.451;QD=28.75;ReadPosRankSum=7.762;VQSLOD=2.8084;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:25,13:35:65.66:1095,66,0	1/1:9,2:11:21.03:339,21,0	0/0:37,0:16:43.55:0,44,930	0/0:64,0:26:59.54:0,60,1536	1/1:27,10:36:29.03:926,29,0	1/1:22,6:28:52.56:884,53,0	1/1:19,1:20:12.10:202,12,0	0/1:39,0:36:86.83:87,0,437	0/0:24,0:24:47.96:0,48,1326	1/1:21,4:25:62.57:909,63,0	1/1:9,5:13:21.03:418,21,0	1/1:20,7:24:48.03:848,48,0	1/1:13,8:20:43.92:744,44,0	1/1:14,8:22:38.43:757,38,0	1/1:16,13:29:58.89:1210,59,0	1/1:15,7:22:38.12:664,38,0	0/1:21,5:26:36.44:501,0,36	1/1:13,2:15:0.27:380,0,0	1/1:8,4:11:31.71:454,32,0	1/1:12,10:21:46.10:865,46,0	1/1:19,1:17:27.85:313,28,0	0/0:30,0:30:86.31:0,86,1723	0/0:24,0:22:48.62:0,49,998	0/0:30,0:30:84.15:0,84,1865	1/1:17,9:23:15.58:788,16,0	1/1:18,11:29:11.19:1122,11,0	1/1:15,14:27:68.35:1230,68,0	1/1:4,0:3:9.02:103,9,0
chr10	61788355	.	AAGAC	A	13862.38	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=6.534;DP=707;FS=13.032;HRun=0;HaplotypeScore=212.3118;InbreedingCoeff=0.9742;MQ=48.23;MQ0=15;MQRankSum=-8.770;QD=27.45;ReadPosRankSum=7.232;VQSLOD=2.9984;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:21,12:33:60.16:978,60,0	1/1:7,4:11:18.06:274,18,0	0/0:39,0:20:32.20:0,32,752	0/0:62,0:27:52.04:0,52,1039	1/1:21,15:36:57.01:777,57,0	1/1:13,14:27:48.16:774,48,0	1/1:9,11:20:15.01:223,15,0	1/1:13,22:34:64.05:1044,64,0	0/0:18,0:18:36.12:0,36,812	1/1:16,8:24:45.15:740,45,0	1/1:9,4:13:21.03:327,21,0	1/1:14,11:24:42.14:675,42,0	1/1:16,6:21:29.22:508,29,0	1/1:13,10:23:39.10:632,39,0	1/1:19,12:31:57.19:941,57,0	1/1:11,10:21:39.09:618,39,0	1/1:11,15:26:39.09:602,39,0	1/1:4,11:16:11.05:428,11,0	1/1:10,3:12:24.08:395,24,0	1/1:15,6:20:48.12:773,48,0	1/1:8,10:17:26.92:294,27,0	0/0:31,0:31:75.22:0,75,1236	0/0:21,0:20:32.80:0,33,567	0/0:31,0:31:67.09:0,67,1304	1/1:14,9:21:39.13:619,39,0	1/1:18,11:29:69.21:1130,69,0	1/1:17,10:27:57.19:958,57,0	1/1:0,3:3:9.03:154,9,0
chr10	61788954	.	GA	G	10712.50	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=11.627;DP=522;FS=0.417;HRun=7;HaplotypeScore=82.1541;InbreedingCoeff=0.9979;MQ=94.15;MQ0=0;MQRankSum=-6.517;QD=26.13;ReadPosRankSum=3.079;VQSLOD=5.4050;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,15:15:42.10:428,42,0	1/1:0,9:9:24.05:245,24,0	0/0:26,0:26:67.75:0,68,809	0/0:18,1:19:21.51:0,22,404	1/1:1,20:21:57.13:581,57,0	1/1:0,18:18:48.08:480,48,0	1/1:2,18:20:45.10:459,45,0	1/1:2,24:26:72.13:720,72,0	0/0:16,0:16:45.14:0,45,567	1/1:3,20:23:60.14:612,60,0	1/1:3,20:23:57.04:567,57,0	1/1:0,16:16:48.11:489,48,0	1/1:0,15:15:36.08:367,36,0	1/1:0,11:11:30.07:306,30,0	1/1:1,15:16:36.05:357,36,0	1/1:0,16:16:39.09:398,39,0	1/1:2,21:23:60.14:611,60,0	1/1:2,23:25:69.15:703,69,0	1/1:5,22:27:66.11:658,66,0	1/1:1,22:23:60.13:612,60,0	1/1:2,12:14:27.06:275,27,0	0/0:16,0:16:45.14:0,45,554	0/0:19,0:19:48.15:0,48,605	0/0:16,0:16:48.15:0,48,605	1/1:0,9:9:24.05:245,24,0	1/1:2,21:23:63.08:624,63,0	1/1:2,25:27:66:672,66,0	1/1:0,10:10:30.07:306,30,0
chr10	61789651	.	AC	A	19478.64	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=6.652;DP=677;FS=4.360;HRun=2;HaplotypeScore=70.2520;InbreedingCoeff=0.9991;MQ=83.02;MQ0=0;MQRankSum=-5.773;QD=35.42;ReadPosRankSum=5.032;VQSLOD=5.3386;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,55:55:99:1987,153,0	1/1:0,9:9:21.07:273,21,0	0/0:17,0:17:36.24:0,36,635	0/0:30,0:30:87.24:0,87,1199	1/1:0,16:16:45.15:584,45,0	1/1:0,23:23:60.20:779,60,0	1/1:2,25:27:60.19:779,60,0	1/1:0,24:24:72.22:921,72,0	0/0:17,0:17:51.17:0,51,764	1/1:0,26:26:72.22:922,72,0	1/1:1,13:14:36.12:468,36,0	1/1:1,32:33:90.28:1168,90,0	1/1:3,30:33:84.27:1086,84,0	1/1:0,26:26:75.24:974,75,0	1/1:1,30:31:78.25:1013,78,0	1/1:0,22:22:66.21:857,66,0	1/1:0,29:29:78.23:1013,78,0	1/1:0,27:27:78.25:1013,78,0	1/1:0,22:22:66.21:853,66,0	1/1:1,19:20:57.19:740,57,0	1/1:0,44:44:99:1480,114,0	0/0:13,0:13:36.12:0,36,538	0/0:21,0:21:63.21:0,63,939	0/0:29,0:29:87.29:0,87,1297	1/1:0,14:14:39.13:506,39,0	1/1:0,25:25:75.24:973,75,0	1/1:0,15:15:39.13:506,39,0	1/1:0,15:15:45.15:584,45,0
chr10	61790953	.	GGTGTGTGT	G	295.87	PASS	AB=0.963;AC=17;AF=0.425;AN=40;BaseQRankSum=3.694;DP=627;FS=7.128;HRun=0;HaplotypeScore=170.5340;InbreedingCoeff=0.3730;MQ=69.67;MQ0=21;MQRankSum=-2.018;QD=1.68;ReadPosRankSum=-0.419;VQSLOD=2.3082;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:0:0,0,0	./.	./.	./.	1/1:12,0:12:3.01:56,3,0	1/1:20,0:20:1.71:45,2,0	0/0:17,1:18:0.89:0,1,2	0/0:28,0:28:0.47:0,0,1	0/0:19,0:21:17.06:0,17,337	0/0:22,0:21:0.89:0,1,2	1/1:18,0:20:2.37:8,2,0	./.	./.	1/1:19,0:19:0.47:1,0,0	1/1:15,0:17:3.01:56,3,0	0/0:22,0:24:2.99:0,3,25	0/0:32,0:31:3.01:0,3,62	0/1:25,0:26:61.15:85,0,61	./.	1/1:19,0:19:3.01:68,3,0	./.	0/0:12,0:12:9.03:0,9,343	0/0:13,0:12:12.04:0,12,317	0/0:40,0:40:42.62:0,43,1342	1/1:18,2:20:2.97:20,3,0	0/0:22,0:22:1.82:0,2,5	1/1:20,1:21:2.90:74,3,0	./.
chr10	61792760	.	TGAGAGAGA	T	2802.91	PASS	AB=0.806;AC=36;AF=0.750;AN=48;BaseQRankSum=5.796;DP=573;FS=33.821;HRun=0;HaplotypeScore=163.3504;InbreedingCoeff=0.2074;MQ=71.41;MQ0=4;MQRankSum=-3.879;QD=7.08;ReadPosRankSum=-1.354;VQSLOD=0.7552;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:14:0.47:1,0,0	1/1:6,2:8:3.01:75,3,0	./.	./.	1/1:8,0:14:2.54:56,3,0	0/1:14,3:18:39.39:66,0,39	0/1:18,1:22:29.26:29,0,39	0/0:30,0:30:3.01:0,3,61	1/1:12,0:22:15.05:269,15,0	1/1:22,5:29:12.95:241,13,0	1/1:10,0:10:1.82:5,2,0	0/1:15,1:25:8.28:89,0,8	1/1:12,0:21:8.46:47,8,0	0/1:12,0:17:55.04:60,0,55	0/1:16,1:27:3.48:132,0,3	1/1:16,9:31:23.03:645,23,0	1/1:6,6:12:6.02:150,6,0	1/1:13,0:15:12.04:198,12,0	./.	./.	1/1:22,0:22:3:40,3,0	1/1:16,2:19:5.99:73,6,0	1/1:13,4:18:11.64:214,12,0	0/0:24,0:26:18.06:0,18,299	0/0:18,0:18:8.99:0,9,76	0/1:20,0:20:2.04:2,0,3	1/1:10,7:19:12.04:255,12,0	1/1:6,4:11:12.04:296,12,0
chr10	61792808	.	TG	T	2153.36	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=5.079;DP=629;FS=3.210;HRun=1;HaplotypeScore=121.4925;InbreedingCoeff=0.9923;MQ=62.54;MQ0=9;MQRankSum=0.493;QD=27.97;ReadPosRankSum=1.423;VQSLOD=3.6070;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:24.08:0,24,383	0/0:6,0:6:15.02:0,15,202	0/0:29,0:24:56.09:0,56,934	0/0:45,0:26:62.70:0,63,948	0/0:16,0:16:29.65:0,30,448	0/0:19,0:19:44.95:0,45,714	0/0:32,0:32:81.17:0,81,1288	0/0:38,0:37:99:0,105,1642	0/0:20,0:20:36.12:0,36,552	0/0:16,0:16:48.16:0,48,737	0/0:15,0:14:36.12:0,36,572	0/0:18,0:18:36.12:0,36,537	0/0:24,0:24:54.16:0,54,810	0/0:18,0:18:39.60:0,40,608	0/0:26,0:26:54.16:0,54,776	0/0:29,0:29:69.23:0,69,1049	0/0:15,0:15:27.09:0,27,422	0/0:23,0:23:61.42:0,61,928	0/0:17,0:16:45.13:0,45,675	0/0:19,0:19:42.61:0,43,672	0/0:37,0:37:98.95:0,99,1583	1/1:0,21:21:39.09:524,39,0	1/1:1,29:29:75.25:1043,75,0	1/1:0,26:26:57.06:730,57,0	0/0:18,0:18:51.02:0,51,768	0/0:24,0:24:69.17:0,69,1073	0/0:23,0:22:51.64:0,52,802	0/0:12,0:12:25.57:0,26,348
chr10	61792844	.	ATG	A	605.82	PASS	AB=0.946;AC=4;AF=0.071;AN=56;BaseQRankSum=4.539;DP=788;FS=6.460;HRun=0;HaplotypeScore=132.0505;InbreedingCoeff=0.4800;MQ=60.80;MQ0=4;MQRankSum=0.249;QD=8.19;ReadPosRankSum=-2.588;VQSLOD=2.2230;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:48.15:0,48,774	0/0:9,0:9:27.09:0,27,442	0/0:45,0:35:60:0,60,831	0/0:41,0:30:39.04:0,39,584	0/0:23,1:25:25.80:0,26,924	0/0:19,0:19:54.18:0,54,885	0/0:38,1:39:44.07:0,44,1215	1/1:19,18:38:38.33:684,38,0	0/0:23,0:23:57.17:0,57,908	0/0:24,0:24:54.18:0,54,858	0/0:19,0:19:47.85:0,48,770	0/0:22,0:22:54.18:0,54,886	0/0:26,0:26:66.23:0,66,1077	0/0:26,0:26:66.22:0,66,1027	0/0:28,0:28:63.21:0,63,1024	0/0:26,0:26:60.20:0,60,984	0/1:20,1:21:26:26,0,640	0/0:34,0:34:86.37:0,86,1341	0/0:25,0:25:15.60:0,16,719	0/0:30,0:30:84.29:0,84,1374	0/0:60,0:60:99:0,147,2381	0/0:30,0:30:72.22:0,72,1155	0/0:27,0:27:66.23:0,66,1075	0/0:37,0:37:81.27:0,81,1315	0/0:21,1:22:20:0,20,843	0/0:30,0:30:75.26:0,75,1223	0/0:21,0:20:48.15:0,48,751	0/1:14,1:15:7.10:7,0,413
chr10	61792957	.	GGT	G	3585.42	PASS	AB=0.949;AC=42;AF=0.778;AN=54;BaseQRankSum=-0.380;DP=647;FS=14.710;HRun=0;HaplotypeScore=110.1394;InbreedingCoeff=0.4561;MQ=50.21;MQ0=39;MQRankSum=1.586;QD=7.19;ReadPosRankSum=-2.125;VQSLOD=2.1615;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:35,0:34:41.94:447,42,0	1/1:8,0:7:11.72:105,12,0	./.	0/1:26,0:8:0:0,0,0	1/1:9,1:12:11.87:132,12,0	1/1:11,2:13:3.01:33,3,0	1/1:18,3:24:30.04:316,30,0	0/0:31,0:28:8.92:0,9,74	0/0:14,0:15:12.02:0,12,132	1/1:20,1:25:29.36:264,29,0	1/1:12,1:17:12.03:131,12,0	1/1:16,5:22:14.68:151,15,0	1/1:21,0:21:20.05:253,20,0	1/1:19,0:18:12.03:132,12,0	1/1:21,2:25:5.05:223,5,0	0/1:22,1:25:65.94:131,0,66	1/1:21,2:22:26.06:227,26,0	0/1:13,0:13:43.88:84,0,44	1/1:19,0:17:16.28:165,16,0	1/1:23,0:23:12.03:132,12,0	1/1:33,14:43:1.99:59,2,0	1/1:16,0:20:5.77:39,6,0	0/0:9,1:10:11.90:0,12,125	0/0:40,0:60:5.73:0,6,321	1/1:8,9:18:11.73:105,12,0	1/1:20,7:26:30.32:276,30,0	1/1:14,1:15:14.56:125,15,0	0/1:8,1:8:53.81:54,0,54
chr10	61793784	.	CT	C	20115.45	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=8.467;DP=665;FS=4.356;HRun=1;HaplotypeScore=65.7035;InbreedingCoeff=0.9962;MQ=85.53;MQ0=0;MQRankSum=-5.513;QD=37.67;ReadPosRankSum=4.303;VQSLOD=5.4382;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,69:69:99:2473,178,0	1/1:0,9:9:24.08:335,24,0	0/0:17,0:17:41.32:0,41,674	0/0:30,0:30:78.23:0,78,1174	1/1:0,18:18:54.14:732,54,0	1/1:0,19:19:45.15:629,45,0	1/1:0,20:20:51.17:712,51,0	1/1:0,33:33:99:1312,99,0	0/0:27,0:27:81.22:0,81,1204	1/1:0,23:23:69.12:936,69,0	1/1:0,19:19:48.16:671,48,0	1/1:0,19:19:51.17:713,51,0	1/1:0,31:31:84.28:1174,84,0	1/1:0,21:21:57.19:796,57,0	1/1:0,25:25:69.23:964,69,0	1/1:0,27:27:69.23:964,69,0	1/1:0,33:33:93.31:1300,93,0	1/1:0,17:17:39.13:545,39,0	1/1:0,13:13:39.13:542,39,0	1/1:0,22:22:63.21:880,63,0	1/1:0,49:49:99:1802,129,0	0/0:16,0:16:45.15:0,45,719	0/0:10,0:10:30.10:0,30,479	0/0:31,0:31:93.30:0,93,1463	1/1:0,15:15:36.12:503,36,0	1/1:0,33:33:99:1347,99,0	1/1:1,13:14:42.14:574,42,0	1/1:0,5:5:15.05:210,15,0
chr10	61794594	.	TTC	T	17211.50	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=12.320;DP=605;FS=0.000;HRun=0;HaplotypeScore=114.0315;InbreedingCoeff=0.9927;MQ=88.33;MQ0=0;MQRankSum=-6.298;QD=36.08;ReadPosRankSum=4.763;VQSLOD=6.8816;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,40:43:99:1590,111,0	1/1:0,6:6:12.04:171,12,0	0/0:18,0:18:42.14:0,42,737	0/0:27,0:27:77.91:0,78,1267	1/1:3,22:25:63.17:879,63,0	1/1:0,20:20:51.17:731,51,0	1/1:1,30:31:66.22:946,66,0	1/1:3,20:23:60.17:822,60,0	0/0:21,0:21:60.21:0,60,1088	1/1:2,21:23:63.21:899,63,0	1/1:1,17:18:42.14:602,42,0	1/1:0,23:23:59.94:860,60,0	1/1:0,13:13:36.12:516,36,0	1/1:0,12:12:27.09:386,27,0	1/1:2,23:25:60.20:860,60,0	1/1:0,18:18:54.18:774,54,0	1/1:1,22:23:54.18:774,54,0	1/1:2,20:22:54.18:774,54,0	1/1:3,16:19:48.14:664,48,0	1/1:0,23:23:63.21:903,63,0	1/1:1,31:32:81.27:1161,81,0	0/0:24,0:24:66.23:0,66,1202	0/0:12,0:12:33.11:0,33,578	0/0:26,0:26:75.26:0,75,1362	1/1:0,24:24:66.22:946,66,0	1/1:1,24:25:72.24:1032,72,0	1/1:2,20:21:45.05:622,45,0	1/1:0,7:7:21.07:301,21,0
chr10	61796146	.	G	GCC	15090.78	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-4.277;DP=537;FS=2.528;HRun=7;HaplotypeScore=97.7214;InbreedingCoeff=0.9952;MQ=81.60;MQ0=0;MQRankSum=-10.133;QD=36.54;ReadPosRankSum=0.581;VQSLOD=4.4423;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,25:30:63.17:1004,63,0	1/1:0,12:12:32.47:499,32,0	0/0:17,0:17:42.01:0,42,456	0/0:21,0:21:51.10:0,51,574	1/1:5,7:13:23.57:353,24,0	1/1:4,12:16:31.66:495,32,0	1/1:6,24:30:60.20:974,60,0	1/1:0,12:12:27.05:389,27,0	0/0:20,0:20:48.12:0,48,550	1/1:2,14:17:48.15:749,48,0	1/1:2,12:15:30.10:491,30,0	1/1:9,22:32:68.97:1086,69,0	1/1:4,17:21:51.17:835,51,0	1/1:0,18:18:48.12:748,48,0	1/1:3,23:27:74.61:1079,75,0	1/1:2,25:28:78.10:1242,78,0	1/1:4,16:21:54.18:872,54,0	1/1:5,16:21:39.13:631,39,0	1/1:5,11:16:33.08:510,33,0	1/1:3,12:15:33.11:530,33,0	1/1:3,13:16:30.10:486,30,0	0/0:11,0:11:27.07:0,27,315	0/0:12,0:12:30.07:0,30,339	0/0:43,0:43:99:0,117,1348	1/1:1,16:17:46.04:739,46,0	1/1:4,7:11:28.89:423,29,0	1/1:4,13:17:45.11:709,45,0	1/1:0,7:7:15.05:246,15,0
chr10	61796200	.	T	TC	6788.55	PASS	AB=0.875;AC=43;AF=0.768;AN=56;BaseQRankSum=10.949;DP=510;FS=51.782;HRun=1;HaplotypeScore=442.6657;InbreedingCoeff=0.8926;MQ=91.00;MQ0=0;MQRankSum=-14.274;QD=19.18;ReadPosRankSum=1.158;VQSLOD=0.7960;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:26:57.32:610,57,0	1/1:4,0:4:11.61:98,12,0	0/0:25,0:25:61.04:0,61,830	0/0:29,0:30:87.20:0,87,1069	1/1:19,0:20:17.69:258,18,0	1/1:15,0:15:27.83:284,28,0	1/1:18,2:20:46.86:478,47,0	0/1:12,1:14:0.44:163,0,0	0/0:25,0:25:75.24:0,75,973	1/1:21,0:21:22.92:278,23,0	1/1:9,0:9:16.41:234,16,0	1/1:26,1:27:54.36:511,54,0	1/1:17,0:17:38.45:365,38,0	1/1:17,0:17:29.84:321,30,0	1/1:30,0:30:57.10:586,57,0	1/1:23,0:23:41.24:421,41,0	1/1:10,0:10:13.41:217,13,0	1/1:12,0:12:23.92:251,24,0	1/1:9,0:9:20.77:195,21,0	1/1:11,0:11:19.67:189,20,0	1/1:19,0:19:30.82:315,31,0	0/0:16,0:16:42.14:0,42,545	0/0:9,0:9:21.05:0,21,258	0/0:51,0:51:99:0,144,1869	1/1:11,0:11:17.97:185,18,0	1/1:25,0:25:49.16:510,49,0	1/1:13,0:13:18.25:292,18,0	1/1:1,0:1:3:29,3,0
chr10	61796381	.	T	TAC	8393.44	PASS	AB=0.717;AC=25;AF=0.463;AN=54;BaseQRankSum=-4.327;DP=916;FS=5.833;HRun=0;HaplotypeScore=141.4299;InbreedingCoeff=-0.1632;MQ=56.65;MQ0=36;MQRankSum=1.210;QD=12.01;ReadPosRankSum=-0.925;VQSLOD=4.1317;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:33:35.42:0,35,321	1/1:6,8:16:18.06:270,18,0	./.	0/1:70,0:13:0:0,0,0	0/0:14,0:14:15.02:0,15,157	0/1:5,13:18:5.41:316,0,5	0/1:32,17:51:99:521,0,198	0/0:23,0:20:8.33:0,8,46	0/1:14,18:35:99:537,0,109	0/1:17,14:31:24.24:444,0,24	0/1:14,8:22:99:154,0,117	1/1:15,18:33:8.96:537,9,0	0/1:17,17:36:54.09:629,0,54	0/1:18,13:31:33.21:361,0,33	1/1:12,25:37:45.13:623,45,0	0/1:15,17:31:38.75:615,0,39	0/1:20,19:40:0.12:816,0,0	0/0:20,0:20:10.57:0,11,254	0/1:12,4:16:15.94:142,0,16	0/1:14,15:31:29.37:294,0,29	0/1:47,26:76:99:740,0,108	0/1:22,0:25:9.63:10,0,249	0/0:15,0:16:29.91:0,30,310	0/0:34,1:45:77.21:0,77,747	0/1:8,14:22:29.52:407,0,30	0/1:14,12:28:74.22:372,0,74	0/1:15,10:24:6.04:334,0,6	1/1:5,12:17:18.06:271,18,0
chr10	61797580	.	CAGAG	C	1602.55	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.629;DP=702;FS=0.677;HRun=0;HaplotypeScore=111.9736;InbreedingCoeff=0.9951;MQ=89.02;MQ0=0;MQRankSum=-6.158;QD=39.09;ReadPosRankSum=-3.564;VQSLOD=3.2191;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,129,3460	0/0:7,0:7:21.07:0,21,556	0/0:28,0:28:78.17:0,78,1923	0/0:24,0:24:69.14:0,69,1706	0/0:27,0:27:78.27:0,78,2102	0/0:32,0:32:93.32:0,93,2508	0/0:13,0:13:39.13:0,39,1052	1/1:7,34:41:96.28:1697,96,0	0/0:24,0:24:66.21:0,66,1722	0/0:14,0:14:33.09:0,33,779	0/0:15,0:15:42.14:0,42,1134	0/0:22,0:22:66.23:0,66,1746	0/0:27,0:27:78.27:0,78,2102	0/0:26,0:26:78.27:0,78,2081	0/0:23,0:23:66.21:0,66,1717	0/0:12,0:12:33.11:0,33,883	0/0:19,0:19:54.17:0,54,1365	0/0:31,0:31:93.30:0,93,2428	0/0:30,0:30:81.11:0,81,2089	0/0:34,0:34:99:0,99,2503	0/0:29,0:29:84.25:0,84,2152	0/0:26,0:26:75.26:0,75,2014	0/0:22,0:22:63.19:0,63,1571	0/0:39,0:39:99:0,117,3099	0/0:14,0:14:33.11:0,33,890	0/0:28,0:28:81.27:0,81,2104	0/0:36,0:36:99:0,99,2549	0/0:15,0:15:45.15:0,45,1198
chr10	61797802	.	TA	T	2205.28	PASS	AB=0.895;AC=9;AF=0.161;AN=56;BaseQRankSum=6.922;DP=694;FS=7.132;HRun=10;HaplotypeScore=87.9902;InbreedingCoeff=0.8633;MQ=81.34;MQ0=0;MQRankSum=-0.521;QD=17.64;ReadPosRankSum=2.140;VQSLOD=4.2073;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,111,1219	0/0:13,0:14:35.92:0,36,370	0/0:29,0:31:36.79:0,37,611	0/1:15,2:17:37.96:38,0,225	0/0:24,0:24:63.15:0,63,682	0/0:22,0:22:51.11:0,51,547	0/0:15,0:15:39.06:0,39,418	0/0:7,0:31:74.97:0,75,414	1/1:2,22:24:65.98:573,66,0	0/0:25,0:25:69.18:0,69,752	0/0:15,1:16:16.05:0,16,398	0/0:22,0:22:54.13:0,54,585	0/0:29,0:29:81.19:0,81,878	0/0:21,0:21:60.16:0,60,664	0/0:26,0:26:44.95:0,45,669	0/0:17,0:17:45.11:0,45,489	0/0:34,1:36:60.99:0,61,873	0/0:32,2:34:32.13:0,32,803	0/0:20,1:21:22.04:0,22,459	0/0:26,0:26:57.15:0,57,631	0/0:18,0:18:48.11:0,48,521	1/1:2,23:25:62.84:536,63,0	1/1:4,24:28:59.55:520,60,0	1/1:1,30:31:80.98:703,81,0	0/0:29,0:29:75.20:0,75,827	0/0:32,0:32:87.24:0,87,962	0/0:28,1:29:40.10:0,40,654	0/0:8,0:8:24.05:0,24,257
chr10	61798267	.	G	GTCTC	5002.70	PASS	AB=0.896;AC=38;AF=0.679;AN=56;BaseQRankSum=-0.564;DP=527;FS=6.472;HRun=0;HaplotypeScore=110.9176;InbreedingCoeff=-0.0315;MQ=67.69;MQ0=14;MQRankSum=-0.002;QD=10.83;ReadPosRankSum=-1.235;VQSLOD=3.6788;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:16:3.31:25,3,0	1/1:10,0:10:9.02:146,9,0	0/0:30,0:18:2.67:0,3,44	0/1:38,0:22:2.43:2,0,27	0/1:12,0:12:17.06:20,0,17	1/1:11,2:13:12.50:215,12,0	0/1:21,0:21:40.26:90,0,40	1/1:29,0:29:21.84:220,22,0	1/1:22,0:21:31.18:460,31,0	0/1:22,1:23:52.15:271,0,52	1/1:12,1:12:8.51:184,9,0	1/1:15,2:17:10.78:353,11,0	1/1:11,5:19:9.03:211,9,0	0/1:6,7:15:35.22:201,0,35	1/1:11,2:14:17.66:220,18,0	0/1:9,1:11:29.21:251,0,29	0/1:25,3:29:55.65:367,0,56	0/1:12,0:12:36.30:47,0,36	0/1:16,0:16:2.32:28,0,2	0/1:12,2:14:26.22:290,0,26	0/1:16,2:17:99:124,0,113	1/1:18,0:17:14.84:224,15,0	1/1:19,0:18:18.06:332,18,0	1/1:24,0:24:26.93:457,27,0	1/1:11,3:16:3.01:71,3,0	0/0:23,0:23:17.65:0,18,240	0/1:12,2:15:31.93:194,0,32	0/0:12,0:11:11.60:0,12,188
chr10	61798305	.	C	CT	474.38	PASS	AB=0.992;AC=11;AF=0.196;AN=56;BaseQRankSum=4.239;DP=534;FS=0.000;HRun=0;HaplotypeScore=107.3901;InbreedingCoeff=0.1837;MQ=59.24;MQ0=30;MQRankSum=-3.876;QD=3.02;ReadPosRankSum=-3.508;VQSLOD=1.9448;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,1:16:16.02:0,16,119	0/1:5,0:5:14.01:14,0,78	0/0:28,0:14:27:0,27,302	0/1:29,0:10:14.18:14,0,88	0/0:18,1:15:9.33:0,9,114	0/0:15,0:15:14.89:0,15,348	0/0:18,5:22:16.16:0,16,359	1/1:19,0:18:14.34:320,14,0	1/1:21,0:19:20.27:174,20,0	0/1:15,1:16:57.88:58,0,228	0/0:12,0:12:2.94:0,3,196	0/1:21,0:21:4.50:5,0,296	0/0:16,0:15:23.44:0,23,225	0/0:20,0:19:38.03:0,38,426	0/0:16,0:16:32.22:0,32,316	0/1:12,0:10:23.57:24,0,182	0/0:38,0:33:11.85:0,12,636	0/0:16,0:14:4.84:0,5,130	0/0:11,0:11:24:0,24,274	0/1:17,0:17:7.85:8,0,227	0/0:34,0:29:55.03:0,55,647	0/1:16,0:15:9.14:9,0,167	0/0:20,0:20:15.47:0,15,310	0/0:30,0:29:51.92:0,52,602	0/0:16,0:16:26.95:0,27,312	0/0:13,0:12:33.02:0,33,376	0/0:17,0:17:19.54:0,20,300	0/0:14,0:11:30.09:0,30,394
chr10	61798317	.	CTG	C	365.70	PASS	AB=0.683;AC=2;AF=0.036;AN=56;BaseQRankSum=3.271;DP=583;FS=7.922;HRun=0;HaplotypeScore=105.7611;InbreedingCoeff=0.0369;MQ=55.54;MQ0=45;MQRankSum=-5.849;QD=8.50;ReadPosRankSum=-1.586;VQSLOD=1.9975;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:17:13.20:0,13,146	0/0:5,0:4:6.01:0,6,77	0/0:32,0:13:36.42:0,36,411	0/0:30,0:8:2.58:0,3,100	0/0:25,0:22:17.99:0,18,198	0/0:14,0:14:39.11:0,39,548	0/0:21,0:20:32.97:0,33,452	0/1:11,11:18:8.53:337,0,9	0/1:12,9:17:25.84:117,0,26	0/0:17,0:15:23.62:0,24,352	0/0:12,0:12:17.76:0,18,244	0/0:17,0:17:33.09:0,33,437	0/0:15,0:14:23.23:0,23,169	0/0:23,0:21:32.86:0,33,388	0/0:19,0:19:32.13:0,32,448	0/0:11,0:8:13.81:0,14,183	0/0:43,0:39:58.76:0,59,839	0/0:13,0:11:17.54:0,18,214	0/0:17,0:14:30.07:0,30,403	0/0:16,0:14:21.07:0,21,322	0/0:44,0:33:44:0,44,854	0/0:21,0:21:15.05:0,15,237	0/0:17,0:17:24.08:0,24,373	0/0:37,0:35:63.59:0,64,866	0/0:16,0:15:24.06:0,24,314	0/0:16,0:15:35.93:0,36,469	0/0:21,0:18:17.71:0,18,281	0/0:14,0:13:23.60:0,24,302
chr10	61798323	.	G	GGTGT	1882.34	PASS	AB=0.941;AC=36;AF=0.720;AN=50;BaseQRankSum=-2.794;DP=592;FS=24.004;HRun=0;HaplotypeScore=120.5113;InbreedingCoeff=0.1243;MQ=54.97;MQ0=49;MQRankSum=2.389;QD=4.29;ReadPosRankSum=1.633;VQSLOD=0.8057;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:17:3.01:35,3,0	1/1:6,0:5:3.01:37,3,0	./.	./.	1/1:24,1:23:6.02:107,6,0	0/1:16,0:16:26.77:77,0,27	1/1:20,1:22:2.88:70,3,0	./.	0/0:19,0:16:8.85:0,9,76	0/1:18,0:16:32.69:74,0,33	0/0:12,1:13:2.55:0,3,20	1/1:13,2:16:3.01:70,3,0	0/1:16,0:15:0:0,0,0	1/1:24,0:23:9:136,9,0	1/1:18,1:20:3.01:49,3,0	0/1:9,1:7:3.51:111,0,4	0/0:42,0:38:19.64:0,20,363	0/1:12,1:11:3.30:182,0,3	1/1:21,2:17:8.39:147,8,0	1/1:16,1:15:6.02:107,6,0	0/1:42,0:31:68.85:83,0,69	1/1:24,0:24:6.02:86,6,0	0/1:16,0:17:0:0,0,0	1/1:36,0:34:15.01:191,15,0	1/1:13,0:13:5.75:51,6,0	0/1:12,0:13:17.17:42,0,17	1/1:15,1:20:6.44:90,6,0	1/1:8,4:13:14.79:275,15,0
chr10	61799920	.	C	CTATA	5199.51	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-9.848;DP=774;FS=5.158;HRun=0;HaplotypeScore=122.2340;InbreedingCoeff=1.0000;MQ=95.99;MQ0=1;MQRankSum=-3.144;QD=61.90;ReadPosRankSum=2.980;VQSLOD=6.5716;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,135,2472	0/0:18,0:18:42.14:0,42,773	0/0:36,0:36:82.12:0,82,1531	0/0:41,0:41:99:0,111,1952	0/0:25,0:25:72.25:0,72,1319	0/0:21,0:21:57.18:0,57,1019	0/0:25,0:25:66.21:0,66,1172	0/0:27,0:26:69.23:0,69,1229	0/0:24,0:24:72.25:0,72,1325	0/0:30,0:30:72.24:0,72,1284	0/0:20,0:20:60.21:0,60,1104	0/0:27,0:27:72.25:0,72,1313	0/0:19,0:19:48.16:0,48,855	0/0:19,0:19:54.17:0,54,963	0/0:42,0:42:99:0,123,2226	0/0:32,0:32:93.30:0,93,1681	0/0:30,0:30:87.30:0,87,1595	0/0:25,0:25:66.23:0,66,1198	0/0:21,0:21:51.16:0,51,834	0/0:20,0:20:54.18:0,54,994	0/0:33,0:33:96.33:0,96,1734	1/1:8,27:35:81.28:2115,81,0	1/1:3,22:26:60.21:1582,60,0	1/1:1,22:22:57.20:1503,57,0	0/0:22,0:22:60.19:0,60,1070	0/0:40,0:40:99:0,117,2153	0/0:27,0:27:75.23:0,75,1338	0/0:16,0:16:42.14:0,42,744
chr10	61800528	.	G	GC	29605.70	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-8.937;DP=823;FS=2.121;HRun=3;HaplotypeScore=64.9522;InbreedingCoeff=0.9998;MQ=84.48;MQ0=0;MQRankSum=-10.395;QD=38.20;ReadPosRankSum=5.965;VQSLOD=4.6460;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,61:62:99:2562,184,0	1/1:0,14:14:42.14:588,42,0	0/0:33,0:33:81.21:0,81,947	0/0:15,0:15:33.10:0,33,396	1/1:0,28:28:84.24:1152,84,0	1/1:1,27:28:78.26:1092,78,0	1/1:1,36:37:99:1452,105,0	1/1:2,31:33:93.31:1302,93,0	1/1:1,23:24:66.22:924,66,0	1/1:2,28:30:84.28:1174,84,0	1/1:1,27:28:75.25:1050,75,0	1/1:1,27:28:81.27:1133,81,0	1/1:0,38:38:99:1597,114,0	1/1:3,25:28:72.24:1008,72,0	1/1:2,28:30:84.28:1176,84,0	1/1:4,19:23:51.17:714,51,0	1/1:1,36:37:99:1512,108,0	1/1:1,30:31:87.29:1218,87,0	1/1:0,22:22:63.20:859,63,0	1/1:6,26:32:78.19:1087,78,0	1/1:4,32:36:81.27:1134,81,0	1/1:0,29:29:81.27:1134,81,0	1/1:3,23:26:66.22:924,66,0	1/1:1,34:35:93.31:1303,93,0	1/1:1,29:30:77.93:1092,78,0	1/1:2,13:15:39.11:527,39,0	1/1:2,27:29:75.25:1050,75,0	1/1:2,20:22:60.20:840,60,0
chr10	61803314	.	CGT	C	2127.09	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=3.602;DP=1206;FS=6.288;HRun=0;HaplotypeScore=190.7970;InbreedingCoeff=0.8578;MQ=55.79;MQ0=36;MQRankSum=0.574;QD=25.02;ReadPosRankSum=0.733;VQSLOD=3.9833;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:55:99:0,129,2004	0/0:21,0:21:40.02:0,40,830	0/0:48,0:9:17.91:0,18,183	0/0:62,1:22:19.88:0,20,391	0/0:35,2:37:87.26:0,87,1370	0/0:21,1:22:13.50:0,14,749	0/0:43,0:43:99:0,99,1512	1/1:10,26:33:66.19:790,66,0	1/1:12,37:48:99:1459,118,0	0/0:70,1:69:99:0,146,2855	0/0:15,0:15:17.73:0,18,257	0/0:49,0:49:99:0,135,2126	0/0:58,2:59:65.41:0,65,2046	0/0:42,2:43:38.73:0,39,1645	0/0:42,1:43:67.45:0,67,1543	0/0:40,0:40:99:0,111,1778	0/0:41,2:43:26.58:0,27,1408	0/0:32,1:33:58.56:0,59,1466	0/0:23,0:21:54.18:0,54,865	0/0:29,0:29:69.11:0,69,1111	0/0:132,3:134:99:0,246,4964	0/0:43,0:43:90.64:0,91,1438	0/0:24,0:24:66.23:0,66,1085	0/0:58,3:60:99:0,104,2088	0/0:18,1:18:1.26:0,1,560	0/0:45,2:47:44.74:0,45,1697	0/0:31,0:31:75.20:0,75,1162	0/0:15,1:16:10.35:0,10,709
chr10	61803366	.	AGT	A	19807.42	PASS	AB=0.551;AC=40;AF=0.769;AN=52;BaseQRankSum=12.844;DP=1247;FS=0.690;HRun=0;HaplotypeScore=173.9876;InbreedingCoeff=0.8092;MQ=48.72;MQ0=121;MQRankSum=2.969;QD=21.60;ReadPosRankSum=4.555;VQSLOD=5.3490;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,38:47:87.20:1107,87,0	0/1:5,17:21:14.21:384,0,14	./.	./.	1/1:3,33:35:57.18:725,57,0	1/1:5,20:25:42.12:535,42,0	1/1:6,43:43:38.60:477,39,0	0/0:67,0:56:99:0,135,2149	0/0:51,0:34:63.15:0,63,1021	1/1:12,47:55:99:1464,117,0	1/1:2,17:18:20.86:242,21,0	1/1:10,43:52:84.02:1043,84,0	1/1:12,50:60:99:1412,111,0	1/1:10,40:49:90.29:1146,90,0	1/1:3,52:54:90.28:1146,90,0	1/1:2,27:29:37.30:668,37,0	1/1:10,28:37:81.26:1030,81,0	1/1:7,30:38:55.37:966,55,0	1/1:8,19:25:54.17:687,54,0	1/1:5,22:25:33.09:420,33,0	1/1:31,127:149:99:3376,268,0	0/0:47,0:43:66.21:0,66,1070	0/0:26,0:23:51.16:0,51,827	0/0:62,1:62:99:0,123,2009	1/1:1,22:19:39.12:496,39,0	1/1:5,43:46:99:1500,120,0	0/1:3,18:21:5.04:489,0,5	1/1:7,19:24:39.12:496,39,0
chr10	61803555	.	AGT	A	1516.55	PASS	AB=0.587;AC=3;AF=0.056;AN=54;BaseQRankSum=7.066;DP=1459;FS=3.972;HRun=0;HaplotypeScore=226.5796;InbreedingCoeff=0.5664;MQ=50.77;MQ0=122;MQRankSum=1.841;QD=20.22;ReadPosRankSum=1.297;VQSLOD=3.7394;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,2:52:78.61:0,79,1804	0/0:24,0:22:50.75:0,51,744	0/0:40,0:1:2.94:0,3,18	./.	0/0:33,0:33:75.23:0,75,1253	0/0:36,0:35:59.84:0,60,955	0/0:56,2:48:49.09:0,49,1334	0/0:73,0:41:99:0,105,1497	0/0:81,0:65:99:0,121,1963	0/0:90,1:77:99:0,220,3420	0/0:13,0:12:27.09:0,27,452	0/0:83,0:79:99:0,168,2723	0/0:60,1:58:91.25:0,91,1960	0/0:70,0:69:99:0,156,2538	0/0:69,1:69:99:0,106,2213	0/0:62,1:61:99:0,129,2077	0/0:41,2:43:88.39:0,88,1670	0/0:28,2:30:31.07:0,31,1058	0/0:24,2:16:45.15:0,45,753	0/0:34,0:35:81.17:0,81,1213	0/0:169,2:162:99:0,379,6067	0/0:44,0:43:90.31:0,90,1499	0/0:19,0:19:39.12:0,39,626	0/0:62,0:59:99:0,151,2504	0/0:33,1:34:78.24:0,78,1253	0/1:19,45:60:99:1391,0,113	0/0:22,1:23:19.01:0,19,829	1/1:4,7:10:18.06:228,18,0
chr10	61803590	.	CTG	C	7652.74	PASS	AB=0.944;AC=12;AF=0.214;AN=56;BaseQRankSum=12.561;DP=1621;FS=5.303;HRun=0;HaplotypeScore=241.3438;InbreedingCoeff=0.8273;MQ=53.34;MQ0=67;MQRankSum=-1.320;QD=20.09;ReadPosRankSum=-1.827;VQSLOD=4.2927;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:64,1:65:99:0,161,2562	0/0:21,0:19:41.82:0,42,692	0/0:67,0:18:34.33:0,34,392	0/0:73,0:15:30.20:0,30,311	0/0:36,0:36:69.08:0,69,1095	0/0:30,0:29:56.83:0,57,920	0/0:63,0:55:99:0,132,2065	1/1:27,81:91:99:2597,214,0	1/1:26,72:80:99:1932,159,0	0/0:100,1:93:99:0,197,3660	0/0:23,0:22:54.15:0,54,842	0/0:84,2:84:99:0,150,3018	0/0:58,2:57:59.89:0,60,1980	0/0:77,4:79:99:0,108,2669	0/0:81,0:80:99:0,158,2615	0/0:59,1:58:91.57:0,92,1999	0/0:43,0:44:95.37:0,95,1626	0/0:32,1:33:52.39:0,52,1334	0/0:31,0:21:49.98:0,50,787	0/0:32,0:32:72.19:0,72,1131	0/0:165,3:164:99:0,224,5781	1/1:6,36:40:78.25:977,78,0	1/1:2,23:25:51.14:641,51,0	1/1:18,40:57:99:1483,120,0	0/1:26,2:28:1.64:2,0,1010	0/0:65,1:65:99:0,103,2037	0/0:16,0:16:39.13:0,39,639	0/1:20,1:20:21.04:21,0,629
chr10	61803776	.	AGT	A	2944.29	PASS	AB=0.732;AC=3;AF=0.054;AN=56;BaseQRankSum=11.305;DP=1504;FS=11.562;HRun=0;HaplotypeScore=213.2632;InbreedingCoeff=0.5704;MQ=52.66;MQ0=35;MQRankSum=-3.333;QD=13.89;ReadPosRankSum=-6.042;VQSLOD=0.9699;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:64,0:64:99:0,162,2644	0/0:22,0:22:59.77:0,60,990	0/0:51,0:13:35.15:0,35,528	0/0:49,0:14:2.84:0,3,439	0/0:23,1:24:19.01:0,19,851	0/0:24,0:24:51.12:0,51,805	0/0:59,1:59:75.99:0,76,1746	1/1:34,69:93:99:2275,147,0	0/1:68,40:101:99:775,0,1815	0/0:78,1:77:99:0,169,3229	0/0:17,0:17:44.36:0,44,701	0/0:78,0:78:99:0,205,3387	0/0:54,1:54:97.28:0,97,2129	0/0:73,0:73:99:0,181,2904	0/0:55,0:55:99:0,143,2311	0/0:74,0:74:99:0,184,2963	0/0:46,0:45:99:0,118,1957	0/0:30,0:30:75.25:0,75,1224	0/0:41,0:33:94.20:0,94,1554	0/0:26,1:26:54.14:0,54,874	0/0:166,2:160:99:0,296,5949	0/0:38,0:37:83.79:0,84,1313	0/0:21,0:20:48.16:0,48,799	0/0:51,0:51:96.33:0,96,1605	0/0:28,0:26:63.69:0,64,1053	0/0:72,0:70:99:0,169,2739	0/0:28,0:28:78.20:0,78,1238	0/0:15,0:15:38.72:0,39,652
chr10	61803985	.	A	AGTGT	2522.93	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=-1.131;DP=1167;FS=7.330;HRun=0;HaplotypeScore=197.5044;InbreedingCoeff=0.7950;MQ=55.73;MQ0=36;MQRankSum=-2.514;QD=21.38;ReadPosRankSum=-1.781;VQSLOD=2.5303;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:90.29:0,90,1470	0/0:18,0:18:45.14:0,45,726	0/0:37,0:4:8.98:0,9,119	0/1:34,0:5:5.98:6,0,45	0/0:20,0:21:51.02:0,51,826	0/0:20,0:22:54.11:0,54,799	0/0:59,0:61:99:0,141,2133	1/1:31,0:25:23.20:236,23,0	1/1:24,28:50:99:2406,102,0	0/0:49,0:47:99:0,114,1841	0/0:13,0:13:33.10:0,33,527	0/0:67,0:71:99:0,168,2590	0/0:52,0:52:99:0,135,2089	0/0:41,0:43:99:0,110,1831	0/0:52,0:52:99:0,129,2071	0/0:56,0:57:88.67:0,89,1918	0/0:41,0:41:99:0,102,1647	0/0:36,0:37:61.26:0,61,1338	0/0:26,0:24:49.97:0,50,851	0/0:33,0:33:66.21:0,66,1071	0/0:155,0:154:99:0,331,5557	0/0:33,0:35:75.13:0,75,1159	0/0:38,0:38:93.29:0,93,1509	0/0:42,0:42:99:0,100,1582	0/0:24,0:24:63.21:0,63,1055	0/0:52,0:52:99:0,100,1863	0/0:17,0:16:45.15:0,45,756	0/0:14,0:14:26.99:0,27,361
chr10	61806914	.	C	CG	30493.61	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-8.932;DP=806;FS=4.909;HRun=1;HaplotypeScore=74.5493;InbreedingCoeff=0.9989;MQ=80.86;MQ0=0;MQRankSum=-9.829;QD=39.81;ReadPosRankSum=5.827;VQSLOD=5.1512;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,60:60:99:2382,160,0	1/1:1,14:15:36.12:539,36,0	0/0:19,0:19:49.86:0,50,599	0/0:21,0:21:54.04:0,54,742	1/1:0,16:16:45.15:674,45,0	1/1:0,26:26:78.26:1168,78,0	1/1:4,32:36:93.32:1394,93,0	1/1:0,23:22:69.22:1006,69,0	1/1:0,35:35:93.32:1393,93,0	1/1:2,30:32:90.30:1346,90,0	1/1:2,16:18:45.15:674,45,0	1/1:0,35:35:99:1528,102,0	1/1:3,35:38:96.32:1427,96,0	1/1:6,32:38:78.26:1169,78,0	1/1:0,27:27:78.26:1168,78,0	1/1:0,25:25:72.24:1079,72,0	1/1:2,40:42:99:1707,114,0	1/1:0,30:30:75.25:1124,75,0	1/1:3,18:21:57.19:844,57,0	1/1:0,18:18:45.11:649,45,0	1/1:2,60:62:99:2389,127,0	1/1:2,32:34:87.29:1303,87,0	1/1:1,18:20:54.16:787,54,0	1/1:0,39:39:99:1573,105,0	1/1:0,21:21:63.21:944,63,0	1/1:1,24:25:72.21:1033,72,0	1/1:1,20:21:57.18:834,57,0	1/1:0,9:9:24.08:360,24,0
chr10	61814001	.	ACCACCACCACC	A	2943.65	PASS	AC=38;AF=0.760;AN=50;BaseQRankSum=1.189;DP=242;FS=5.444;HRun=0;HaplotypeScore=68.0556;InbreedingCoeff=0.3738;MQ=47.68;MQ0=15;MQRankSum=0.396;QD=16.73;ReadPosRankSum=2.800;VQSLOD=1.1661;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:16:11.86:194,12,0	./.	0/0:21,0:5:2.94:0,3,18	0/0:14,0:5:6.01:0,6,68	1/1:5,0:4:3.01:58,3,0	1/1:4,3:7:3.01:97,3,0	1/1:12,0:12:20.06:329,20,0	0/0:3,0:3:1.25:0,1,3	./.	1/1:4,2:5:6.02:140,6,0	./.	1/1:9,0:9:15.01:307,15,0	1/1:0,3:3:3.01:97,3,0	1/1:4,0:4:6.02:150,6,0	1/1:7,6:13:9.03:275,9,0	1/1:3,4:7:3.01:97,3,0	1/1:12,1:12:17.98:399,18,0	1/1:11,0:11:15.05:367,15,0	1/1:5,1:5:6.01:122,6,0	1/1:4,0:3:3:26,3,0	1/1:36,0:32:5.54:62,6,0	0/0:3,3:6:0.53:0,1,1	1/1:2,5:7:5.61:194,6,0	0/0:7,6:13:2.67:0,3,11	1/1:3,2:5:3.01:39,3,0	1/1:6,0:6:3.01:62,3,0	0/0:2,5:7:0.47:0,0,1	1/1:5,0:4:3.01:43,3,0
chr10	61814012	.	C	CA	926.37	PASS	AB=0.920;AC=16;AF=0.320;AN=50;BaseQRankSum=-0.047;DP=220;FS=2.766;HRun=0;HaplotypeScore=43.4885;InbreedingCoeff=-0.2319;MQ=53.94;MQ0=10;MQRankSum=0.291;QD=6.34;ReadPosRankSum=0.715;VQSLOD=3.0656;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:21:48.60:49,0,68	1/1:0,2:2:6.02:81,6,0	0/0:19,0:4:3.98:0,4,68	0/0:14,0:4:5.57:0,6,65	0/0:3,0:3:9.03:0,9,125	0/0:5,0:5:5.23:0,5,49	0/1:10,4:14:99:207,0,120	./.	./.	0/1:4,0:2:1.78:37,0,2	./.	0/1:6,7:13:99:225,0,136	1/1:3,0:3:3.01:33,3,0	0/0:4,0:4:11.25:0,11,133	0/1:8,0:8:35.69:36,0,38	0/0:5,0:5:5.23:0,5,49	0/1:10,4:13:99:148,0,206	0/1:10,1:11:27.31:99,0,27	0/1:6,0:6:2.73:3,0,128	0/0:3,0:3:6.02:0,6,84	0/1:30,0:28:24.01:24,0,154	0/0:4,0:4:5.41:0,5,51	0/0:5,0:5:4.44:0,4,14	0/1:10,0:11:15.47:15,0,128	0/0:3,0:3:3.01:0,3,42	0/1:5,0:5:63.49:73,0,63	0/0:7,0:7:4.26:0,4,45	0/1:3,0:2:35.92:37,0,36
chr10	61814026	.	ACCACCACCCCAC	A	1868.63	PASS	AB=1.000;AC=24;AF=0.429;AN=56;BaseQRankSum=7.842;DP=238;FS=0.725;HRun=0;HaplotypeScore=67.9680;InbreedingCoeff=-0.0751;MQ=65.32;MQ0=7;MQRankSum=-4.776;QD=13.54;ReadPosRankSum=7.316;VQSLOD=0.5442;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:1,24:25:11.86:258,12,0	0/0:3,0:3:1.51:0,2,37	0/0:20,0:7:14.87:0,15,146	0/0:14,0:6:11.61:0,12,155	1/1:2,0:2:6.02:121,6,0	0/1:4,0:4:33.46:52,0,33	0/1:17,0:17:99:110,0,238	0/0:8,0:8:19.26:0,19,220	0/0:1,0:1:3.01:0,3,39	0/1:4,0:3:32.21:54,0,32	0/0:2,0:2:3.01:0,3,39	0/1:11,0:11:20.73:137,0,21	0/1:4,0:4:33.45:52,0,33	1/1:3,0:3:6.01:84,6,0	0/1:11,0:11:99:135,0,137	0/1:6,0:6:48.84:49,0,70	0/1:14,0:13:90.33:215,0,90	1/1:1,11:12:15.05:528,15,0	0/1:5,0:5:30.50:75,0,31	1/1:2,0:2:3:26,3,0	0/0:27,0:26:8.72:0,9,300	0/0:5,0:5:5.04:0,5,63	0/1:6,0:6:30.45:107,0,30	0/0:12,0:12:15.47:0,15,182	0/1:4,0:4:12.43:12,0,34	0/1:6,0:6:16.05:16,0,69	0/0:8,0:8:9.50:0,9,119	1/1:2,0:1:1.25:3,1,0
chr10	61814418	.	CT	C	646.54	PASS	AB=0.867;AC=5;AF=0.089;AN=56;BaseQRankSum=6.534;DP=410;FS=3.845;HRun=10;HaplotypeScore=43.4665;InbreedingCoeff=0.5570;MQ=76.64;MQ0=0;MQRankSum=0.691;QD=13.47;ReadPosRankSum=-1.208;VQSLOD=2.8522;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:90.20:0,90,969	0/0:5,0:5:15.04:0,15,166	0/1:11,2:13:23.37:23,0,80	0/0:10,0:9:11.70:0,12,127	0/0:9,0:9:17.13:0,17,226	0/0:13,0:13:33.07:0,33,355	0/0:29,0:29:75.20:0,75,830	1/1:3,17:20:47.97:414,48,0	1/1:3,12:15:38.99:337,39,0	0/0:11,1:12:7.03:0,7,306	0/0:5,0:5:14.87:0,15,147	0/0:20,0:20:54.07:0,54,568	0/0:13,1:14:16.05:0,16,398	0/0:11,0:11:33.07:0,33,356	0/0:10,0:10:30.07:0,30,325	0/0:17,0:17:48.13:0,48,531	0/0:27,0:27:75.18:0,75,818	0/0:15,1:16:22.07:0,22,472	0/0:22,2:24:11.06:0,11,578	0/0:1,0:1:3.01:0,3,33	0/0:22,2:24:17.06:0,17,637	0/0:12,0:12:4.06:0,4,265	0/0:6,0:6:18.03:0,18,190	0/0:22,1:24:39.95:0,40,645	0/0:2,0:2:6.02:0,6,66	0/0:18,1:19:16.05:0,16,398	0/0:11,1:12:4.07:0,4,257	0/0:9,0:9:27.07:0,27,299
chr10	61818218	.	AGTT	A	2092.23	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.085;DP=564;FS=1.245;HRun=0;HaplotypeScore=81.2503;InbreedingCoeff=0.9990;MQ=75.00;MQ0=0;MQRankSum=-0.950;QD=38.75;ReadPosRankSum=1.185;VQSLOD=4.5582;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,117,2846	0/0:9,0:9:27.09:0,27,641	0/0:20,0:20:35.92:0,36,1229	0/0:22,0:22:63.22:0,63,1493	0/0:26,0:26:78.24:0,78,1810	0/0:12,0:12:36.11:0,36,837	0/0:19,0:19:57.20:0,57,1398	0/0:32,0:32:96.32:0,96,2286	0/0:15,0:15:45.15:0,45,1108	0/0:28,0:28:84.29:0,84,2037	0/0:17,0:17:51.18:0,51,1257	0/0:18,0:18:54.19:0,54,1307	0/0:11,0:11:33.11:0,33,809	0/0:19,0:19:57.18:0,57,1327	0/0:21,0:21:63.16:0,63,1473	0/0:19,0:19:57.18:0,57,1356	0/0:10,0:10:30.10:0,30,738	0/0:27,0:27:81.28:0,81,1974	0/0:21,0:21:63.18:0,63,1496	0/0:14,0:14:42.14:0,42,1031	0/0:25,0:25:75.26:0,75,1837	1/1:0,13:13:30.10:541,30,0	1/1:0,14:14:36.12:576,36,0	1/1:0,27:27:60.21:1119,60,0	0/0:21,0:21:63.22:0,63,1530	0/0:26,0:26:78.27:0,78,1902	0/0:24,0:24:69.22:0,69,1644	0/0:14,0:14:42.14:0,42,1035
chr10	61818368	.	C	CTAGA	5082.28	PASS	AB=0.815;AC=32;AF=0.640;AN=50;BaseQRankSum=-3.946;DP=638;FS=13.750;HRun=0;HaplotypeScore=137.1766;InbreedingCoeff=0.6922;MQ=65.10;MQ0=11;MQRankSum=-0.380;QD=12.61;ReadPosRankSum=-1.691;VQSLOD=3.0698;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:34,0:34:17.80:179,18,0	0/0:6,0:6:9:0,9,104	./.	./.	1/1:34,0:33:2.82:55,3,0	1/1:20,0:27:12.04:208,12,0	1/1:15,0:15:3.01:69,3,0	./.	1/1:18,0:17:11.07:163,11,0	0/0:13,0:21:19.53:0,20,163	0/0:14,0:27:25.58:0,26,228	0/0:27,0:27:30.10:0,30,450	0/0:16,0:17:12.03:0,12,160	0/0:15,0:15:33.07:0,33,455	0/0:6,0:17:18.02:0,18,168	1/1:9,8:17:18.06:416,18,0	1/1:13,11:23:24.08:555,24,0	1/1:20,0:19:6.45:73,6,0	1/1:16,5:21:15.48:270,15,0	1/1:14,15:31:24.08:555,24,0	0/0:38,0:39:66.22:0,66,973	1/1:24,0:24:6.91:108,7,0	1/1:20,0:20:3.01:64,3,0	1/1:18,0:18:5.93:59,6,0	0/1:12,16:29:3.17:859,0,3	1/1:32,0:32:27.09:516,27,0	1/1:13,12:25:33.11:762,33,0	0/1:12,0:12:94.73:170,0,95
chr10	61818422	.	A	AGATAGATC	4446.19	PASS	AB=1.000;AC=24;AF=0.429;AN=56;BaseQRankSum=5.781;DP=689;FS=16.596;HRun=0;HaplotypeScore=190.4328;InbreedingCoeff=0.3928;MQ=67.04;MQ0=17;MQRankSum=-0.625;QD=11.06;ReadPosRankSum=0.864;VQSLOD=2.7491;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:36,0:36:50.13:535,50,0	0/0:7,0:7:17.99:0,18,265	0/0:33,0:23:68.50:0,68,598	0/0:17,0:11:26.83:0,27,281	1/1:25,0:24:32.59:284,33,0	0/1:24,0:24:99:762,0,196	0/0:16,0:15:12.04:0,12,258	0/0:37,0:31:87.02:0,87,791	1/1:4,18:22:9.03:389,9,0	0/0:26,0:25:67.61:0,68,798	0/0:23,0:23:52.61:0,53,764	0/0:23,0:23:65.76:0,66,1124	0/0:24,0:24:68.96:0,69,753	0/0:21,0:21:63.07:0,63,1081	0/0:21,0:21:48.03:0,48,641	0/1:20,0:20:28.50:29,0,254	0/1:26,0:24:53.08:53,0,214	1/1:5,15:21:8.57:161,9,0	0/1:20,0:19:87.43:87,0,299	0/1:32,0:32:41.04:41,0,308	0/0:39,0:39:99:0,114,2150	1/1:24,0:24:37.10:406,37,0	1/1:21,0:21:37.88:322,38,0	1/1:20,0:19:24.38:202,24,0	0/1:30,0:30:99:100,0,310	1/1:3,0:26:62.55:602,63,0	0/1:33,0:32:63.92:64,0,364	0/1:20,0:20:67.91:407,0,68
chr10	61819141	.	T	TCC	12582.91	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-16.822;DP=626;FS=0.000;HRun=1;HaplotypeScore=71.1287;InbreedingCoeff=0.9927;MQ=78.03;MQ0=1;MQRankSum=-0.521;QD=50.53;ReadPosRankSum=2.434;VQSLOD=4.7489;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,38:40:99:1991,105,0	0/0:5,0:5:12.04:0,12,180	0/0:19,0:19:48.16:0,48,712	0/0:12,0:12:36.11:0,36,501	1/1:0,34:33:90.27:1697,90,0	0/0:22,0:22:66:0,66,956	0/0:25,0:25:69.22:0,69,1035	1/1:2,29:31:90.31:1735,90,0	1/1:0,17:18:51.17:983,51,0	0/0:20,0:20:57.19:0,57,871	0/0:20,0:20:51.17:0,51,780	0/0:21,0:21:60.20:0,60,919	0/0:16,0:16:48.16:0,48,735	0/0:22,0:22:57.19:0,57,873	0/0:27,0:27:81.26:0,81,1218	0/0:17,0:17:48.15:0,48,715	0/0:29,0:29:81.27:0,81,1239	1/1:1,21:22:17.26:1114,17,0	0/0:22,0:22:60.20:0,60,897	0/0:14,0:14:42.14:0,42,643	0/0:37,0:37:99:0,108,1633	1/1:0,14:14:36.12:696,36,0	1/1:3,25:27:66.23:1270,66,0	1/1:0,33:33:84.29:1623,84,0	0/0:25,0:25:72.24:0,72,1100	1/1:0,21:22:60.19:1126,60,0	0/0:24,0:24:72.24:0,72,1078	1/1:0,6:6:18.06:348,18,0
chr10	61819635	.	GTCTCGAGGAGGCTGTCTCTCCA	G	1377.89	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=4.861;DP=621;FS=5.410;HRun=0;HaplotypeScore=337.8878;InbreedingCoeff=0.9001;MQ=83.81;MQ0=0;MQRankSum=-4.675;QD=98.42;ReadPosRankSum=1.701;VQSLOD=2.6930;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:90.31:0,90,8868	0/0:12,0:12:36.12:0,36,3121	0/0:24,0:24:69.24:0,69,4598	0/0:17,0:17:48.03:0,48,3162	0/0:19,0:19:54.17:0,54,4846	0/0:25,0:25:75.26:0,75,7314	0/0:32,0:32:96.33:0,96,9020	0/0:18,0:18:54.19:0,54,4763	0/0:26,0:26:78.27:0,78,7286	0/0:26,0:26:78.27:0,78,7428	0/0:16,0:16:48.16:0,48,4481	0/0:29,0:29:84.29:0,84,7213	0/0:24,0:24:72.25:0,72,6925	0/0:14,0:14:36.09:0,36,3055	0/0:31,0:31:93.30:0,93,8884	0/0:21,0:21:63.22:0,63,5630	0/0:29,0:29:84.25:0,84,8045	0/0:21,0:21:63.22:0,63,6651	0/0:19,0:19:57.20:0,57,4199	0/0:19,0:19:57.20:0,57,5502	0/0:29,0:29:87.30:0,87,7804	0/0:29,0:29:84.27:0,84,8041	0/0:15,0:15:42.14:0,42,4143	0/0:34,0:34:96.33:0,96,9409	0/0:15,0:15:45.15:0,45,4215	1/1:2,8:10:21.07:1300,21,0	0/0:32,0:31:96.33:0,96,9133	1/1:3,1:4:3.01:186,3,0
chr10	61820133	.	CACACACACACAGAGAGAGAGAGAGAGAGAGAG	C	623	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=3.782;DP=531;FS=0.000;HRun=0;HaplotypeScore=309.5640;InbreedingCoeff=0.7047;MQ=51.57;MQ0=21;MQRankSum=-1.513;QD=10.93;ReadPosRankSum=-0.105;VQSLOD=1.1390;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:54.18:0,54,3568	0/0:4,0:4:12.04:0,12,821	0/0:31,0:11:4.17:0,4,435	0/0:20,0:5:12.04:0,12,412	0/0:16,0:16:30.57:0,31,1725	0/0:15,0:15:27.08:0,27,1538	0/0:18,0:17:40.08:0,40,1566	0/0:25,0:23:60.16:0,60,1692	0/0:21,0:20:38.92:0,39,2876	0/0:20,0:20:57.20:0,57,3608	0/0:14,0:14:36.12:0,36,2411	0/0:27,0:27:52.40:0,52,3868	0/0:15,0:15:39.11:0,39,3166	0/0:11,0:11:18.53:0,19,1220	0/0:16,0:16:39.13:0,39,2866	0/0:20,0:20:55.90:0,56,2759	0/0:22,0:19:50.39:0,50,3319	0/0:15,0:14:42.14:0,42,2478	0/0:21,0:20:51.15:0,51,2969	0/0:25,0:25:54.19:0,54,3804	0/0:22,0:20:30.57:0,31,1971	1/1:7,15:20:3.01:254,3,0	1/1:7,10:16:2.80:222,3,0	1/1:3,15:18:3.01:254,3,0	0/0:12,0:11:21.07:0,21,1206	0/0:29,0:28:81.19:0,81,4385	0/0:22,0:21:54.08:0,54,3540	0/0:10,0:6:18.06:0,18,1654
chr10	61820904	.	GTCT	G	8860.50	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=14.282;DP=530;FS=19.636;HRun=0;HaplotypeScore=79.3131;InbreedingCoeff=0.9965;MQ=63.13;MQ0=4;MQRankSum=-2.887;QD=39.56;ReadPosRankSum=4.543;VQSLOD=4.1577;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,38:38:90.31:1499,90,0	0/0:5,0:5:15.04:0,15,299	0/0:21,0:14:42.14:0,42,859	0/0:23,0:21:33.13:0,33,1319	1/1:0,16:16:36.12:600,36,0	0/0:16,0:16:48.16:0,48,1071	0/0:26,0:26:75.21:0,75,1616	1/1:4,26:30:75.21:1168,75,0	1/1:1,14:15:27.09:450,27,0	0/0:13,0:13:39.13:0,39,877	0/0:12,0:12:36.12:0,36,816	0/0:10,0:10:27.09:0,27,596	0/0:14,0:14:42.14:0,42,949	0/0:11,0:11:33.11:0,33,746	0/0:9,0:9:21.07:0,21,476	0/0:16,0:16:42.14:0,42,947	0/0:24,0:24:69.19:0,69,1515	1/1:3,24:27:60.20:999,60,0	0/0:22,0:18:54.19:0,54,1215	0/0:15,0:15:39.13:0,39,882	0/0:43,0:43:99:0,126,2814	1/1:0,14:14:30.10:500,30,0	1/1:1,21:22:45.15:750,45,0	1/1:0,23:24:63.22:1050,63,0	0/0:12,0:12:36.12:0,36,814	1/1:1,23:24:72.25:1195,72,0	0/0:14,0:14:39.13:0,39,866	1/1:1,13:14:39.13:650,39,0
chr10	61821087	.	CGTGTGTGTGTGTGTGT	C	4058.53	PASS	AB=0.667;AC=11;AF=0.196;AN=56;BaseQRankSum=8.020;DP=601;FS=11.810;HRun=0;HaplotypeScore=231.6526;InbreedingCoeff=0.8095;MQ=61.74;MQ0=15;MQRankSum=-7.909;QD=38.65;ReadPosRankSum=3.005;VQSLOD=1.6867;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:16,8:25:18.06:775,18,0	0/0:6,0:8:21.07:0,21,1217	0/0:34,0:14:16.82:0,17,700	0/0:44,0:20:18.06:0,18,901	1/1:5,6:12:15.05:563,15,0	0/0:22,0:25:48.16:0,48,3119	0/0:30,0:31:48.16:0,48,2849	0/0:36,0:36:60.19:0,60,3379	1/1:7,7:17:27.09:1091,27,0	0/0:14,0:16:32.60:0,33,1921	0/0:6,0:7:9.03:0,9,523	0/0:21,0:21:45.15:0,45,2978	0/0:20,0:21:34.65:0,35,1974	0/0:21,0:24:60.20:0,60,3670	0/0:10,0:22:45.15:0,45,2021	0/0:17,0:17:21.07:0,21,1433	0/0:16,0:19:33.11:0,33,2180	1/1:9,5:13:3:133,3,0	0/0:18,0:20:27.09:0,27,1321	0/0:13,0:14:21.07:0,21,1227	0/0:43,0:48:88.18:0,88,5202	0/0:4,0:10:18.06:0,18,1023	0/0:10,0:10:18.06:0,18,1058	0/0:18,0:36:42.11:0,42,2991	0/0:9,0:10:21.07:0,21,1353	0/1:11,10:22:99:966,0,146	0/0:14,0:18:27.56:0,28,1294	1/1:8,7:15:11.78:531,12,0
chr10	61821958	.	TGA	T	1070.22	PASS	AB=0.918;AC=26;AF=0.500;AN=52;BaseQRankSum=3.211;DP=606;FS=2.309;HRun=0;HaplotypeScore=96.1117;InbreedingCoeff=-0.0318;MQ=66.48;MQ0=31;MQRankSum=1.560;QD=3.01;ReadPosRankSum=1.073;VQSLOD=2.2832;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:6.01:0,6,61	0/0:10,0:10:10.75:0,11,95	./.	./.	0/1:15,0:15:46.33:46,0,100	1/1:16,4:19:13.43:110,13,0	0/1:21,1:22:43.30:43,0,199	0/0:25,0:24:2.84:0,3,14	1/1:8,0:8:5.68:28,6,0	0/0:20,0:20:21.03:0,21,265	0/1:18,2:20:68.31:68,0,149	0/1:8,0:22:19.22:55,0,19	1/1:7,11:18:14.83:161,15,0	1/1:8,0:16:14.20:70,14,0	0/1:16,2:18:43.34:43,0,199	0/0:27,0:27:24.34:0,24,302	0/1:19,6:26:77.77:78,0,252	0/1:17,0:16:10.41:10,0,283	0/1:13,1:14:23.55:24,0,47	0/1:18,0:19:33.26:33,0,210	0/1:20,0:20:13.72:14,0,161	0/0:20,0:19:0.47:0,0,1	1/1:25,0:25:17.83:172,18,0	1/1:11,0:11:11.55:80,12,0	1/1:12,1:19:11.53:74,12,0	0/1:20,0:19:76.11:84,0,76	0/1:24,0:24:43.74:44,0,246	0/0:15,0:14:9.48:0,9,106
chr10	61822574	.	T	TA	5013.80	PASS	AB=0.895;AC=22;AF=0.393;AN=56;BaseQRankSum=-9.679;DP=634;FS=1.530;HRun=12;HaplotypeScore=68.5987;InbreedingCoeff=0.8207;MQ=73.07;MQ0=0;MQRankSum=1.075;QD=16.17;ReadPosRankSum=0.573;VQSLOD=5.9365;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:15,22:37:52.23:792,52,0	0/0:8,0:9:19.90:0,20,137	0/1:17,1:14:31.74:32,0,65	0/0:14,0:12:10.06:0,10,50	1/1:6,21:27:48.08:467,48,0	0/0:21,0:21:44.70:0,45,326	0/0:16,0:17:37.81:0,38,268	1/1:15,35:51:64.13:920,64,0	1/1:10,12:22:24.04:234,24,0	0/0:14,0:14:32.79:0,33,240	0/0:14,0:14:3.61:0,4,188	0/1:13,3:16:22.57:23,0,183	0/0:10,0:11:28.86:0,29,202	0/0:15,0:15:32.77:0,33,239	0/0:28,1:30:46.43:0,46,485	0/0:21,0:22:58.67:0,59,420	0/0:37,0:37:93.66:0,94,678	1/1:2,17:19:36.06:350,36,0	0/0:26,1:28:26.53:0,27,349	0/0:26,0:26:38.98:0,39,376	0/0:15,0:15:35.59:0,36,254	1/1:10,11:22:47.89:442,48,0	1/1:5,12:19:26.72:233,27,0	1/1:6,25:32:56.93:540,57,0	0/0:23,0:23:59.62:0,60,437	1/1:7,26:33:75.08:715,75,0	0/0:26,0:27:61.61:0,62,441	1/1:4,10:14:28.76:266,29,0
chr10	61822708	.	T	TA	5916.96	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-8.474;DP=676;FS=9.748;HRun=9;HaplotypeScore=67.7163;InbreedingCoeff=0.9978;MQ=73.20;MQ0=0;MQRankSum=-2.329;QD=23.02;ReadPosRankSum=0.198;VQSLOD=5.3281;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,39:50:99:1228,111,0	0/0:8,0:8:20.98:0,21,180	0/0:19,0:19:27.04:0,27,280	0/0:17,0:15:29.40:0,29,235	1/1:3,22:25:52.38:657,52,0	0/0:15,0:16:44.02:0,44,368	0/0:26,0:26:68.97:0,69,594	1/1:8,2:41:91.90:526,92,0	1/1:1,14:15:39.11:431,39,0	0/0:37,0:38:91.99:0,92,785	0/0:18,0:18:50.99:0,51,443	0/0:19,0:19:50.95:0,51,438	0/0:13,0:13:38.99:0,39,338	0/0:23,0:23:59.94:0,60,511	0/0:29,0:29:74.93:0,75,642	0/0:18,0:17:41.95:0,42,358	0/0:40,1:41:65.77:0,66,795	1/1:2,12:14:36.10:398,36,0	0/0:26,0:26:65.95:0,66,565	0/0:28,0:28:71.94:0,72,614	0/0:33,0:33:80.93:0,81,692	1/1:3,25:28:66.18:730,66,0	1/1:3,22:25:30.79:571,31,0	1/1:1,18:19:48.13:531,48,0	0/0:24,0:24:68.86:0,69,583	1/1:7,21:28:60.13:646,60,0	0/0:23,0:23:56.98:0,57,495	1/1:0,12:12:18.05:199,18,0
chr10	61824446	.	CA	C	1314.36	PASS	AB=0.844;AC=25;AF=0.446;AN=56;BaseQRankSum=6.113;DP=634;FS=31.419;HRun=15;HaplotypeScore=83.5991;InbreedingCoeff=0.3876;MQ=58.14;MQ0=2;MQRankSum=-0.887;QD=3.54;ReadPosRankSum=6.656;VQSLOD=-0.4118;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,17:24:18.94:230,19,0	0/0:11,1:12:10.70:0,11,212	0/0:15,0:5:8.32:0,8,57	0/1:14,0:7:7.36:7,0,51	0/1:10,11:22:24.81:111,0,25	0/1:16,3:21:3.54:4,0,222	0/0:30,2:32:46.11:0,46,461	1/1:8,0:33:45.66:131,46,0	1/1:11,7:19:5.22:152,5,0	0/1:27,3:30:19.30:19,0,318	0/1:19,2:21:3.43:3,0,304	0/0:33,0:33:61.84:0,62,499	0/0:19,1:20:22.57:0,23,296	0/0:18,0:26:32.12:0,32,233	0/0:30,1:32:55.18:0,55,547	0/0:18,0:23:41.66:0,42,340	0/0:23,2:26:40.50:0,40,434	1/1:5,7:12:13.94:94,14,0	0/1:24,5:28:68.91:69,0,163	0/0:16,1:20:31.24:0,31,346	0/0:15,5:20:29.94:0,30,245	1/1:7,9:16:22.64:140,23,0	1/1:13,6:19:17.41:115,17,0	0/1:10,19:33:5.38:172,0,5	0/1:12,1:15:7.53:8,0,42	1/1:13,7:22:20.97:126,21,0	0/1:26,3:28:34.32:34,0,187	1/1:4,7:11:13.09:93,13,0
chr10	61826510	.	CGTGTGT	C	563.47	PASS	AB=0.833;AC=7;AF=0.130;AN=54;BaseQRankSum=3.914;DP=585;FS=2.105;HRun=0;HaplotypeScore=119.7669;InbreedingCoeff=0.3213;MQ=60.41;MQ0=22;MQRankSum=-2.039;QD=4.14;ReadPosRankSum=0.681;VQSLOD=2.3115;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:40,0:39:89.78:90,0,133	0/0:7,0:7:6.02:0,6,164	./.	0/0:37,0:14:0:0,0,0	0/0:12,3:15:5.17:0,5,69	0/0:17,0:17:14.69:0,15,380	0/0:25,0:28:30.07:0,30,566	0/0:17,0:15:11.02:0,11,105	0/1:18,1:18:42.61:99,0,43	0/0:18,0:18:20.98:0,21,345	0/0:7,0:7:6.02:0,6,146	0/0:27,0:29:36.12:0,36,875	0/0:13,0:14:13.55:0,14,224	0/0:10,0:10:11.27:0,11,248	0/0:22,0:20:30.09:0,30,618	0/0:19,0:19:21.07:0,21,591	0/0:32,0:35:43.32:0,43,1110	0/1:17,1:30:99:105,0,105	0/0:13,0:8:6.02:0,6,132	0/0:4,0:5:3.01:0,3,38	0/0:43,0:43:39.13:0,39,761	0/0:12,0:11:3.90:0,4,43	0/0:9,0:10:15.03:0,15,219	0/0:45,0:46:24.43:0,24,930	0/0:11,0:10:18.06:0,18,413	1/1:13,5:17:12.15:161,12,0	0/0:8,0:8:5.78:0,6,113	1/1:17,7:24:10.11:239,10,0
chr10	61826837	.	T	TA	237.66	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=2.640;DP=295;FS=0.997;HRun=0;HaplotypeScore=39.4079;InbreedingCoeff=0.4185;MQ=64.23;MQ0=15;MQRankSum=1.019;QD=5.94;ReadPosRankSum=-3.178;VQSLOD=2.2613;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:6:17.89:0,18,137	0/0:1,0:1:3.01:0,3,42	0/0:12,0:6:14.84:0,15,181	0/1:15,0:7:4.56:5,0,97	0/0:20,0:19:29.42:0,29,376	0/0:21,0:21:60.20:0,60,833	0/0:7,0:7:15.05:0,15,201	1/1:8,17:20:31.71:331,32,0	0/0:9,0:9:6.36:0,6,156	0/0:13,0:13:39.11:0,39,526	0/0:10,0:10:30.10:0,30,420	0/0:5,0:5:15.04:0,15,193	0/0:3,0:3:9.03:0,9,126	0/0:4,0:4:9.03:0,9,126	0/0:10,0:10:30.10:0,30,420	0/0:7,0:7:18.06:0,18,252	0/0:21,0:19:57.19:0,57,797	0/0:15,0:13:11.87:0,12,216	0/0:17,0:17:51.15:0,51,672	0/0:8,0:8:21.07:0,21,287	0/0:5,0:5:12.04:0,12,163	0/0:3,0:3:8.94:0,9,81	0/0:3,0:3:8.11:0,8,44	0/0:2,0:2:2.96:0,3,19	0/0:7,0:7:21.07:0,21,294	0/0:11,0:11:23.87:0,24,168	0/0:15,0:15:45.15:0,45,629	0/0:19,0:16:35.73:0,36,208
chr10	61826838	.	T	TAA	2104.43	PASS	AB=0.750;AC=19;AF=0.339;AN=56;BaseQRankSum=3.296;DP=300;FS=6.009;HRun=10;HaplotypeScore=39.7997;InbreedingCoeff=0.8180;MQ=64.20;MQ0=14;MQRankSum=-0.967;QD=17.99;ReadPosRankSum=-0.467;VQSLOD=1.0870;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,6:6:18.02:244,18,0	0/0:1,0:1:3.01:0,3,31	0/0:13,0:6:15.03:0,15,150	0/0:15,0:7:8.32:0,8,94	1/1:4,18:21:51:723,51,0	0/0:21,0:21:57.13:0,57,579	0/0:7,0:7:12.02:0,12,122	1/1:24,0:20:35.54:257,36,0	1/1:3,7:10:27.09:401,27,0	0/0:12,0:12:33.04:0,33,327	0/0:10,0:10:30.05:0,30,298	0/0:5,0:5:15.03:0,15,152	0/0:3,0:3:9.02:0,9,92	0/0:4,0:4:9.02:0,9,92	0/0:10,0:10:30.07:0,30,305	0/0:7,0:7:21.03:0,21,207	0/0:21,0:19:57.02:0,57,555	1/1:4,11:13:30.10:446,30,0	0/0:18,0:18:39.06:0,39,396	0/0:8,0:8:18.01:0,18,183	0/0:6,0:6:14.99:0,15,145	0/1:1,0:3:3.98:11,0,4	1/1:0,0:3:7.49:26,7,0	1/1:0,0:3:2.50:9,2,0	0/0:7,0:7:21.05:0,21,214	1/1:5,0:11:16.53:57,17,0	0/0:15,0:15:45.10:0,45,457	1/1:8,1:16:5.26:130,5,0
chr10	61826891	.	T	TA	2339.39	PASS	AB=0.920;AC=10;AF=0.179;AN=56;BaseQRankSum=-5.823;DP=409;FS=1.804;HRun=8;HaplotypeScore=44.3702;InbreedingCoeff=0.7539;MQ=65.98;MQ0=0;MQRankSum=-1.853;QD=18.87;ReadPosRankSum=-2.228;VQSLOD=2.6781;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:39.02:0,39,357	0/0:5,0:5:14.99:0,15,131	0/0:15,0:14:35.98:0,36,322	0/0:7,0:7:4.22:0,4,30	0/0:17,0:17:48.01:0,48,436	0/0:20,0:20:41.92:0,42,371	0/0:9,0:9:21:0,21,192	1/1:7,30:37:90.24:1019,90,0	1/1:4,10:14:33.08:362,33,0	0/0:17,0:17:48.02:0,48,439	0/0:20,0:20:60.01:0,60,538	0/0:5,0:5:14.96:0,15,129	0/0:9,0:9:27.01:0,27,247	0/0:5,0:5:12:0,12,107	0/0:10,0:10:30.02:0,30,274	0/1:11,1:12:1.61:2,0,237	0/0:31,0:31:87.03:0,87,791	0/0:17,0:17:44.99:0,45,404	0/1:20,2:22:12.20:12,0,406	0/0:17,0:17:51.03:0,51,467	0/0:14,0:14:39:0,39,351	0/0:6,0:6:18.01:0,18,165	0/0:11,0:11:32.94:0,33,292	0/0:6,0:6:12.01:0,12,110	0/0:8,0:8:21.01:0,21,192	1/1:1,17:18:48.14:554,48,0	0/0:23,0:23:63.01:0,63,570	1/1:2,19:21:48.14:554,48,0
chr10	61826921	.	TAAC	T	176.64	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.032;DP=435;FS=3.531;HRun=0;HaplotypeScore=66.5263;InbreedingCoeff=0.8647;MQ=65.33;MQ0=0;MQRankSum=0.724;QD=29.44;ReadPosRankSum=0.933;VQSLOD=3.2228;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:42.09:0,42,721	0/0:8,0:8:24.08:0,24,500	0/0:14,0:14:14.22:0,14,307	0/0:10,0:10:23.74:0,24,352	0/0:16,0:16:42.10:0,42,761	0/0:18,0:18:48.15:0,48,947	0/0:8,0:8:21.01:0,21,253	0/0:38,0:36:87.21:0,87,1411	0/0:11,0:11:30.10:0,30,596	0/0:17,0:17:45.13:0,45,809	0/0:20,0:20:45.12:0,45,846	0/0:6,0:6:15.03:0,15,224	0/0:10,0:10:24.07:0,24,461	0/0:4,0:4:9.03:0,9,188	0/0:7,0:7:18.05:0,18,335	0/0:12,0:12:30.09:0,30,590	0/0:36,0:36:89.87:0,90,1649	0/0:19,0:19:42.44:0,42,673	0/0:24,0:24:45.11:0,45,811	0/0:22,0:22:54.15:0,54,1048	0/0:26,0:26:78.16:0,78,1359	0/0:6,0:6:15.04:0,15,275	0/0:12,0:12:27.09:0,27,558	0/0:10,0:10:15.03:0,15,274	1/1:0,6:6:18.06:267,18,0	0/0:21,0:21:60.16:0,60,1075	0/0:19,0:19:45.15:0,45,903	0/0:18,0:18:42.03:0,42,749
chr10	61827573	.	ATG	A	113.14	PASS	AB=0.903;AC=8;AF=0.143;AN=56;BaseQRankSum=1.998;DP=350;FS=3.608;HRun=0;HaplotypeScore=66.7345;InbreedingCoeff=0.0397;MQ=60.96;MQ0=6;MQRankSum=-5.096;QD=1.57;ReadPosRankSum=-3.763;VQSLOD=0.6699;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,1:23:45.15:0,45,706	0/0:3,0:3:9.03:0,9,140	0/0:21,0:14:27.09:0,27,630	0/0:21,0:11:27.04:0,27,448	0/0:11,1:10:15.05:0,15,252	0/0:9,2:11:21.01:0,21,357	0/1:14,0:13:19.19:19,0,400	0/1:14,3:16:52.72:53,0,555	0/0:8,3:9:8.72:0,9,147	0/0:16,0:16:13.18:0,13,665	0/0:3,0:3:9.03:0,9,171	0/0:1,0:1:3.01:0,3,61	0/1:5,1:6:22.37:22,0,92	0/0:6,1:7:15.05:0,15,283	0/0:12,1:13:36.12:0,36,664	1/1:1,4:5:6.01:60,6,0	0/0:16,1:14:36.10:0,36,599	0/0:7,0:6:17.94:0,18,190	0/1:7,2:9:56.25:56,0,146	0/0:6,2:8:17.95:0,18,294	0/0:23,1:23:50.86:0,51,824	0/0:17,0:17:15.05:0,15,224	0/0:13,0:13:23.95:0,24,372	0/0:23,0:23:12.23:0,12,180	0/0:17,0:17:30.10:0,30,554	0/1:15,2:15:26.76:27,0,505	0/0:9,0:9:20.74:0,21,343	0/1:4,0:4:8.03:8,0,109
chr10	61828563	.	GT	G	1471.32	PASS	AB=0.886;AC=11;AF=0.196;AN=56;BaseQRankSum=7.915;DP=699;FS=2.952;HRun=12;HaplotypeScore=95.7879;InbreedingCoeff=0.6091;MQ=70.69;MQ0=0;MQRankSum=-2.105;QD=8.08;ReadPosRankSum=2.529;VQSLOD=3.0111;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:31:40.92:0,41,260	0/0:9,1:10:3.82:0,4,220	0/0:21,0:16:12.63:0,13,87	0/0:15,1:15:4.63:0,5,165	0/0:29,1:30:55.51:0,56,666	0/0:24,0:24:56.90:0,57,542	0/1:12,2:14:10.40:10,0,268	1/1:23,0:23:35.78:276,36,0	1/1:3,23:27:40.40:485,40,0	0/0:19,1:20:18.83:0,19,361	0/0:17,0:21:50.81:0,51,465	0/0:19,1:21:27.89:0,28,442	0/0:22,1:23:30.85:0,31,484	0/0:26,3:30:14.15:0,14,654	0/1:27,5:32:11.73:12,0,607	0/0:24,0:24:63.12:0,63,634	0/0:27,0:28:77.99:0,78,775	0/0:26,1:29:50.83:0,51,642	0/1:19,2:22:4.59:5,0,292	0/0:29,0:29:21.60:0,22,524	0/0:26,2:28:19.65:0,20,557	0/0:5,0:18:37.52:0,38,221	0/0:3,0:23:45.90:0,46,265	0/0:6,0:21:53.89:0,54,285	0/0:26,0:26:71.95:0,72,693	1/1:15,19:34:5.95:374,6,0	0/0:39,3:42:47.27:0,47,991	1/1:7,22:30:47.18:471,47,0
chr10	61828575	.	TA	T	1531.86	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=12.381;DP=667;FS=0.437;HRun=1;HaplotypeScore=93.7681;InbreedingCoeff=0.9026;MQ=71.24;MQ0=0;MQRankSum=-0.749;QD=15.47;ReadPosRankSum=2.494;VQSLOD=3.6668;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:8.97:0,9,59	0/0:10,0:10:27.55:0,28,339	0/0:15,0:11:15.79:0,16,206	0/0:17,1:17:9.35:0,9,269	0/0:31,0:31:29.05:0,29,222	0/0:24,0:24:63.13:0,63,752	0/0:19,0:19:51.67:0,52,552	1/1:7,13:20:35.85:277,36,0	1/1:28,0:28:55.97:502,56,0	0/0:15,0:15:40.93:0,41,499	0/0:15,0:15:42.10:0,42,524	0/0:21,0:21:61.01:0,61,721	0/0:20,0:20:49.02:0,49,616	0/0:31,0:31:82.14:0,82,971	0/0:32,0:32:81.31:0,81,965	0/0:23,0:23:69.19:0,69,872	0/0:29,0:28:84.19:0,84,1037	0/0:28,0:28:39.88:0,40,320	0/0:19,0:19:42.61:0,43,495	0/0:24,0:24:49.35:0,49,615	0/0:24,0:24:54.30:0,54,795	0/0:16,0:16:14.58:0,15,82	0/0:30,0:30:7.89:0,8,65	0/0:24,0:24:3.73:0,4,33	0/0:25,0:25:66.20:0,66,859	1/1:25,0:25:46.59:419,47,0	0/0:46,0:45:99:0,126,1453	1/1:26,0:26:64.97:493,65,0
chr10	61831250	.	TAAATCTTTTTTTAAAA	T	8810.57	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=13.530;DP=462;FS=4.816;HRun=0;HaplotypeScore=245.1269;InbreedingCoeff=0.9570;MQ=76.54;MQ0=0;MQRankSum=-12.449;QD=88.11;ReadPosRankSum=6.102;VQSLOD=4.0916;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,7:9:23.25:451,23,0	0/0:10,0:10:30.10:0,30,2237	0/0:15,0:14:42.10:0,42,1813	0/0:16,0:16:36.59:0,37,1119	1/1:0,14:16:42.89:1413,43,0	0/0:21,0:21:63.17:0,63,4547	0/0:15,0:15:45.09:0,45,2411	0/0:29,0:29:87.29:0,87,4751	1/1:0,16:16:48.16:1998,48,0	0/0:31,0:31:93.32:0,93,6778	0/0:17,0:17:51.18:0,51,3677	0/0:13,0:13:39.13:0,39,2934	0/0:14,0:14:42.13:0,42,2819	0/0:18,0:18:54.19:0,54,3787	0/0:23,0:23:69.24:0,69,4856	0/0:14,0:14:42.14:0,42,2478	0/0:25,0:25:75.26:0,75,5230	1/1:0,4:4:11.91:399,12,0	0/0:14,0:14:42.14:0,42,2969	0/0:22,0:22:66.23:0,66,4689	0/0:16,0:16:48.16:0,48,3297	1/1:0,10:12:33.11:1284,33,0	1/1:1,10:11:23.45:963,23,0	1/1:0,8:14:8.99:381,9,0	0/0:22,0:21:66.21:0,66,4858	1/1:4,13:17:45.14:1795,45,0	0/0:26,0:26:78.25:0,78,5422	1/1:0,1:1:3.01:126,3,0
chr10	61831267	.	GTTGAAGCAC	G	5196.80	PASS	AB=0.509;AC=16;AF=0.286;AN=56;BaseQRankSum=13.412;DP=434;FS=8.159;HRun=0;HaplotypeScore=181.8250;InbreedingCoeff=0.7877;MQ=85.78;MQ0=0;MQRankSum=-12.291;QD=61.14;ReadPosRankSum=6.687;VQSLOD=3.3916;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:0,7:7:6.76:214,0,7	0/0:14,0:14:42.14:0,42,2074	0/0:24,0:23:60.66:0,61,3072	0/0:16,0:15:26.71:0,27,1173	1/1:0,14:14:39:839,39,0	0/0:23,0:23:69.24:0,69,3307	0/0:9,0:9:24.08:0,24,1135	0/0:19,0:19:57.20:0,57,2822	1/1:0,16:16:48.16:1221,48,0	0/0:32,0:32:96.32:0,96,4705	0/0:17,0:17:51.18:0,51,2390	0/0:10,0:10:30.09:0,30,1249	0/0:11,0:11:33.11:0,33,1420	0/0:13,0:13:39.12:0,39,1721	0/0:22,0:22:66.23:0,66,3082	0/0:11,0:11:33.11:0,33,1623	0/0:25,0:25:75.24:0,75,3537	1/1:0,4:4:9.50:239,10,0	0/0:22,0:22:63.20:0,63,2764	0/0:21,0:21:63.22:0,63,3071	0/0:18,0:18:54.19:0,54,2586	1/1:0,10:10:30.10:757,30,0	1/1:0,10:10:23.52:569,24,0	1/1:0,8:8:8.77:226,9,0	0/0:21,0:20:63.22:0,63,3067	0/1:1,14:15:99:1056,0,107	0/0:21,0:21:63.19:0,63,2848	1/1:0,1:1:3.01:77,3,0
chr10	61831976	.	CCA	C	774.09	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=0.267;DP=644;FS=2.767;HRun=0;HaplotypeScore=127.4194;InbreedingCoeff=0.9522;MQ=60.91;MQ0=19;MQRankSum=7.111;QD=24.97;ReadPosRankSum=-0.493;VQSLOD=4.5761;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:28:57.15:0,57,759	0/0:14,0:13:27.09:0,27,438	0/0:41,0:19:51.14:0,51,660	0/0:29,0:11:18.01:0,18,344	0/0:19,0:19:44.46:0,44,530	0/0:18,0:17:33.09:0,33,482	0/0:38,0:40:63.04:0,63,969	1/1:8,23:29:68.25:869,68,0	0/0:28,0:25:57.02:0,57,741	0/0:17,0:15:33.06:0,33,484	0/0:12,0:12:23.35:0,23,336	0/0:29,0:29:57.17:0,57,820	0/0:22,0:23:36.12:0,36,560	0/0:17,0:16:36.12:0,36,543	0/0:20,0:20:36.09:0,36,513	0/0:23,0:25:59.16:0,59,830	0/0:23,0:21:39.13:0,39,597	0/0:23,0:22:60.14:0,60,826	0/0:16,0:16:36.59:0,37,587	0/0:7,0:6:12.04:0,12,185	0/0:59,0:56:99:0,114,1771	0/0:19,0:19:39.06:0,39,559	0/0:13,0:12:21:0,21,280	0/0:24,0:24:36.12:0,36,544	0/0:16,0:16:27.08:0,27,381	0/0:23,0:23:54.08:0,54,741	0/0:17,0:17:36.03:0,36,449	0/0:9,0:9:25.28:0,25,311
chr10	61832007	.	CTT	C	7352.63	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=13.407;DP=602;FS=11.286;HRun=3;HaplotypeScore=101.4211;InbreedingCoeff=0.9996;MQ=88.20;MQ0=0;MQRankSum=-2.450;QD=38.90;ReadPosRankSum=3.333;VQSLOD=3.6444;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,30:30:78.26:1183,78,0	0/0:11,0:11:33.11:0,33,637	0/0:29,0:30:89.51:0,90,1592	0/0:23,0:20:57.17:0,57,1028	1/1:0,16:16:45.15:688,45,0	0/0:17,0:16:40.68:0,41,726	0/0:37,0:37:96.25:0,96,1745	0/0:25,0:25:69.21:0,69,1223	1/1:1,26:27:72.24:1089,72,0	0/0:15,0:15:45.15:0,45,866	0/0:10,0:10:27.08:0,27,488	0/0:30,0:30:90.20:0,90,1660	0/0:22,0:22:60.21:0,60,1142	0/0:20,0:20:54.19:0,54,1026	0/0:19,0:19:51.17:0,51,985	0/0:17,0:17:51.15:0,51,949	0/0:20,0:19:48.14:0,48,863	1/1:1,23:24:60.20:918,60,0	0/0:13,0:13:39.13:0,39,749	0/0:11,0:11:33.11:0,33,638	0/0:55,0:55:99:0,157,2976	1/1:0,22:22:54.18:825,54,0	1/1:2,11:13:30.10:459,30,0	1/1:1,20:21:48.16:733,48,0	0/0:19,0:19:54.19:0,54,1032	1/1:1,22:23:66.22:998,66,0	0/0:19,0:19:51.17:0,51,985	1/1:0,12:12:30.10:459,30,0
chr10	61835102	.	CCT	C	699.19	PASS	AB=1.000;AC=32;AF=0.842;AN=38;BaseQRankSum=-1.855;DP=550;FS=10.162;HRun=0;HaplotypeScore=79.9582;InbreedingCoeff=0.2518;MQ=61.57;MQ0=18;MQRankSum=1.296;QD=1.97;ReadPosRankSum=0.419;VQSLOD=0.9184;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:23:8.28:38,8,0	0/1:8,0:7:0:0,0,0	./.	./.	1/1:23,0:23:3.35:15,3,0	./.	1/1:26,0:25:11.66:114,12,0	./.	1/1:18,0:18:1.61:18,2,0	1/1:19,1:20:5.85:46,6,0	1/1:14,0:14:3:26,3,0	0/1:26,0:26:31.71:58,0,32	./.	1/1:15,5:20:5.95:50,6,0	1/1:15,0:15:8.81:65,9,0	1/1:14,0:14:6.01:63,6,0	1/1:19,0:19:15.18:124,15,0	1/1:17,0:16:12.17:59,12,0	1/1:24,0:20:5.98:50,6,0	./.	0/1:23,0:22:0:0,0,0	./.	0/0:18,0:18:2.84:0,3,14	0/1:18,0:18:0:0,0,0	./.	1/1:25,0:24:1.55:4,2,0	1/1:21,0:20:8.92:63,9,0	./.
chr10	61835143	.	CTCTCTCTCTCT	C	194.42	PASS	AB=1.000;AC=6;AF=0.107;AN=56;BaseQRankSum=3.771;DP=483;FS=11.400;HRun=0;HaplotypeScore=120.7780;InbreedingCoeff=0.1659;MQ=48.78;MQ0=57;MQRankSum=-2.532;QD=2.34;ReadPosRankSum=-1.921;VQSLOD=1.3818;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:15,0:14:41.99:42,0,194	0/0:12,0:9:24.06:0,24,448	0/0:12,0:2:6.01:0,6,65	0/0:24,0:5:9.39:0,9,86	0/1:17,0:14:27.28:27,0,65	0/0:13,0:13:27.05:0,27,351	0/0:19,0:17:44.90:0,45,912	0/0:19,0:17:38.44:0,38,490	0/0:22,0:13:17.15:0,17,418	0/0:17,0:17:45.12:0,45,836	0/0:9,0:8:12.03:0,12,147	0/0:19,0:17:38.76:0,39,789	0/0:18,0:16:38.25:0,38,866	0/0:19,0:17:29.85:0,30,606	0/0:22,0:21:47.03:0,47,888	0/0:20,0:20:25.50:0,26,1215	0/0:31,0:27:74.57:0,75,1505	0/1:18,0:14:34.47:34,0,477	0/0:10,0:9:24.07:0,24,480	0/0:5,0:5:9.03:0,9,171	0/0:16,0:13:15.49:0,15,238	0/0:13,16:23:6.73:0,7,50	1/1:15,0:11:6.38:82,6,0	0/0:18,0:15:5.93:0,6,63	0/0:11,0:11:18.03:0,18,254	0/1:18,0:16:99:130,0,241	0/0:26,0:24:60.55:0,61,914	0/0:9,0:6:1.72:0,2,3
chr10	61835286	.	C	CG	8089.17	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-11.018;DP=684;FS=0.641;HRun=3;HaplotypeScore=68.7884;InbreedingCoeff=0.9993;MQ=87.50;MQ0=0;MQRankSum=-5.048;QD=35.48;ReadPosRankSum=2.048;VQSLOD=5.5090;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,51:52:99:1760,126,0	0/0:13,0:13:39.10:0,39,448	0/0:21,0:22:38.79:0,39,568	0/0:26,0:26:66.17:0,66,753	1/1:1,20:21:60.14:805,60,0	0/0:30,0:30:87.23:0,87,1009	0/0:37,0:37:99:0,99,1187	0/0:29,0:29:78.12:0,78,861	1/1:1,21:22:60.20:838,60,0	0/0:20,0:20:57.17:0,57,675	0/0:24,0:24:69.17:0,69,798	0/0:20,0:20:54.15:0,54,637	0/0:19,0:19:51.13:0,51,588	0/0:21,0:21:54.15:0,54,637	0/0:24,0:24:60.17:0,60,707	0/0:18,0:18:54.17:0,54,647	0/0:29,0:29:75.23:0,75,899	1/1:2,17:19:45.15:629,45,0	0/0:19,0:19:45.13:0,45,530	0/0:21,0:21:57.17:0,57,682	0/0:44,0:44:99:0,123,1425	1/1:3,23:26:57.19:797,57,0	1/1:0,21:21:60.20:836,60,0	1/1:3,26:28:72.22:988,72,0	0/0:17,0:17:48.15:0,48,575	1/1:2,29:31:54.26:1142,54,0	0/0:23,0:23:66.19:0,66,778	1/1:0,7:7:21.07:294,21,0
chr10	61835750	.	T	TGAGAGTGACCACAC	35028.28	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-1.493;DP=736;FS=1.766;HRun=0;HaplotypeScore=277.5969;InbreedingCoeff=0.9992;MQ=77.60;MQ0=0;MQRankSum=-18.509;QD=123.77;ReadPosRankSum=-0.220;VQSLOD=4.5111;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:16,15:37:60.21:3836,60,0	0/0:8,0:8:24.08:0,24,1016	0/0:33,0:33:53.99:0,54,2782	0/0:32,0:32:87.21:0,87,3368	1/1:21,10:34:27.08:1826,27,0	0/0:14,0:14:39.13:0,39,1680	0/0:38,0:38:99:0,114,4143	1/1:29,3:35:99:5721,102,0	1/1:15,15:35:96.33:5830,96,0	0/0:27,0:27:81.28:0,81,3485	0/0:11,0:11:33.11:0,33,1326	0/0:30,0:30:90.30:0,90,3689	0/0:15,0:15:45.14:0,45,1773	0/0:25,0:25:75.24:0,75,3101	0/0:26,0:26:75.26:0,75,3122	0/0:22,0:22:63.19:0,63,2487	0/0:43,0:43:99:0,123,5090	1/1:9,6:17:39.13:2121,39,0	0/0:25,0:25:69.22:0,69,2489	0/0:18,0:18:51.15:0,51,1833	0/0:43,0:43:99:0,123,5076	1/1:13,14:31:63.22:4218,63,0	1/1:11,8:24:26.92:1907,27,0	1/1:12,13:29:45.15:3062,45,0	0/0:13,0:13:39.12:0,39,1351	1/1:14,12:31:93.29:5285,93,0	0/0:29,0:29:84.29:0,84,3288	1/1:6,3:10:27.09:1222,27,0
chr10	61835969	.	G	GA	510.56	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=-3.320;DP=730;FS=6.461;HRun=9;HaplotypeScore=87.6513;InbreedingCoeff=0.6972;MQ=76.06;MQ0=0;MQRankSum=-1.098;QD=12.45;ReadPosRankSum=-5.329;VQSLOD=2.0548;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:95.96:0,96,832	0/0:12,0:12:35.95:0,36,303	0/0:27,0:27:52.72:0,53,441	0/0:23,0:21:36.25:0,36,298	0/0:41,0:41:95.94:0,96,829	0/0:25,0:25:65.97:0,66,573	0/0:19,1:20:26.79:0,27,457	1/1:10,21:30:56.84:604,57,0	0/0:28,0:28:80.95:0,81,696	0/0:32,0:32:83.94:0,84,723	0/0:23,0:23:62.97:0,63,547	0/0:21,0:21:56.97:0,57,491	0/0:19,0:19:44.05:0,44,456	0/0:16,0:16:47.99:0,48,416	0/0:28,1:29:41.77:0,42,592	0/0:27,0:27:71.95:0,72,621	0/0:36,0:36:95.96:0,96,829	0/0:29,0:29:77.94:0,78,672	0/0:23,0:23:56.76:0,57,482	0/0:29,1:30:77.95:0,78,677	0/0:12,0:12:32.95:0,33,277	0/0:34,0:34:83.87:0,84,717	0/0:21,0:22:59.02:0,59,500	0/0:31,0:31:83.97:0,84,728	0/0:27,0:27:74.67:0,75,650	0/0:30,0:30:80.97:0,81,703	0/0:27,0:28:49.51:0,50,557	0/1:10,0:10:6.14:6,0,181
chr10	61836347	.	G	GT	7252.53	PASS	AB=0.522;AC=11;AF=0.196;AN=56;BaseQRankSum=-0.020;DP=782;FS=1.006;HRun=3;HaplotypeScore=80.2502;InbreedingCoeff=0.9280;MQ=82.57;MQ0=0;MQRankSum=-3.999;QD=35.73;ReadPosRankSum=3.384;VQSLOD=5.4645;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,41:44:99:1680,120,0	0/0:17,0:17:51.16:0,51,611	0/0:30,0:30:72.21:0,72,848	0/0:25,0:25:63.19:0,63,756	1/1:0,31:31:84.28:1175,84,0	0/0:18,0:18:51.16:0,51,612	0/0:32,0:32:87.25:0,87,1032	0/0:35,0:35:93.27:0,93,1106	1/1:3,30:33:75.25:1050,75,0	0/0:21,0:21:63.19:0,63,747	0/0:16,0:16:48.14:0,48,564	0/0:26,0:26:78.24:0,78,936	0/0:26,0:26:78.15:0,78,882	0/0:22,0:22:57.14:0,57,657	0/0:28,0:28:84.23:0,84,978	0/0:24,1:25:30.20:0,30,785	0/0:40,0:40:99:0,111,1331	1/1:3,28:31:66.22:924,66,0	0/0:29,0:29:83.86:0,84,938	0/0:20,0:20:54.16:0,54,648	0/0:48,0:48:99:0,141,1641	0/0:17,0:17:45.14:0,45,540	0/0:24,0:24:72.20:0,72,849	0/0:33,0:33:93.27:0,93,1105	0/0:21,0:21:57.17:0,57,683	0/1:3,32:35:2.70:1205,0,3	0/0:26,0:25:78.19:0,78,918	1/1:0,29:29:87.29:1218,87,0
chr10	61837367	.	C	CT	440.84	PASS	AB=0.800;AC=3;AF=0.054;AN=56;BaseQRankSum=3.033;DP=563;FS=0.824;HRun=9;HaplotypeScore=69.6422;InbreedingCoeff=0.4208;MQ=73.37;MQ0=0;MQRankSum=-1.391;QD=13.36;ReadPosRankSum=-4.926;VQSLOD=2.4447;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,105,908	0/1:3,1:4:20.04:27,0,20	0/0:15,0:13:0.32:0,0,29	0/0:7,0:7:1.77:0,2,41	0/0:22,0:23:52.80:0,53,432	0/0:22,0:22:56.98:0,57,495	0/0:18,0:18:47.98:0,48,417	1/1:14,15:29:7.90:509,8,0	0/0:17,0:18:44.01:0,44,371	0/0:24,0:24:62.91:0,63,535	0/0:26,0:26:62.15:0,62,516	0/0:26,0:26:65.95:0,66,566	0/0:17,0:17:47.96:0,48,409	0/0:15,0:16:32.02:0,32,266	0/0:27,0:27:74.95:0,75,645	0/0:21,0:21:47.95:0,48,410	0/0:21,0:21:59.96:0,60,515	0/0:13,0:15:40.04:0,40,319	0/0:18,0:19:55.37:0,55,452	0/0:23,0:23:56.95:0,57,489	0/0:14,0:14:35.49:0,35,312	0/0:13,0:13:23.98:0,24,206	0/0:17,0:17:15.02:0,15,358	0/0:22,0:22:50.93:0,51,436	0/0:18,0:19:56.03:0,56,475	0/0:18,0:19:50:0,50,421	0/0:33,0:33:92.88:0,93,786	0/0:17,0:17:38.96:0,39,339
chr10	61837381	.	TA	T	1469.25	PASS	AB=0.953;AC=11;AF=0.196;AN=56;BaseQRankSum=8.992;DP=553;FS=8.817;HRun=10;HaplotypeScore=64.4706;InbreedingCoeff=0.6804;MQ=72.09;MQ0=0;MQRankSum=-0.105;QD=11.57;ReadPosRankSum=-2.586;VQSLOD=1.9260;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,102,1128	0/0:2,0:2:6.02:0,6,66	0/0:13,0:11:11.70:0,12,105	0/1:11,0:10:16.14:16,0,59	0/1:18,1:19:16.48:16,0,474	0/0:20,0:20:54.13:0,54,589	0/0:17,1:18:22.07:0,22,472	1/1:8,21:29:68.92:587,69,0	0/0:17,0:17:42.11:0,42,465	0/0:26,0:26:66.18:0,66,729	0/1:18,2:20:0.97:1,0,447	0/0:24,0:24:63.08:0,63,673	0/0:17,0:17:42.11:0,42,464	0/0:16,0:16:38.98:0,39,406	0/0:22,0:22:54.14:0,54,596	0/0:18,0:18:48.12:0,48,523	0/0:22,0:22:63.17:0,63,696	0/0:25,0:24:61.41:0,61,665	0/0:23,0:23:54.15:0,54,597	0/0:16,0:16:48.12:0,48,524	0/0:16,0:16:45.11:0,45,488	1/1:1,10:11:29.99:260,30,0	1/1:0,17:17:47.89:417,48,0	1/1:5,15:20:38.99:339,39,0	0/0:20,0:20:54.15:0,54,597	0/0:21,0:21:51.11:0,51,543	0/0:37,0:37:99:0,102,1120	0/0:14,0:14:36.05:0,36,369
chr10	61837789	.	A	AAGAG	2289.48	PASS	AB=0.975;AC=33;AF=0.660;AN=50;BaseQRankSum=-4.436;DP=532;FS=6.873;HRun=0;HaplotypeScore=110.6153;InbreedingCoeff=0.2725;MQ=72.74;MQ0=16;MQRankSum=2.702;QD=6.01;ReadPosRankSum=-2.309;VQSLOD=1.3720;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:21:3:0,3,28	1/1:3,2:5:3.01:48,3,0	./.	0/1:58,0:19:0:0,0,0	0/0:21,0:31:3:0,3,28	1/1:14,5:21:9.47:163,9,0	1/1:11,4:18:2.83:51,3,0	1/1:28,0:28:9.30:56,9,0	0/0:10,0:13:9.01:0,9,84	1/1:17,0:17:18.04:209,18,0	0/1:15,4:18:34.44:64,0,34	1/1:13,5:21:6.02:140,6,0	1/1:17,0:17:1.33:167,1,0	1/1:12,0:12:5.97:46,6,0	0/1:15,0:15:10.66:170,0,11	1/1:8,7:15:12.04:248,12,0	1/1:18,11:33:23.82:502,24,0	./.	0/1:14,0:14:20.45:95,0,20	1/1:16,2:19:3.48:71,3,0	1/1:9,4:14:9.03:210,9,0	0/0:7,0:11:3:0,3,28	0/1:8,0:12:0:0,0,0	0/1:12,0:16:0:0,0,0	1/1:9,5:17:8.77:139,9,0	0/0:9,0:19:15.02:0,15,140	0/1:7,0:7:36.78:54,0,37	./.
chr10	61840608	.	A	AGAGG	1133.91	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-3.124;DP=460;FS=0.000;HRun=0;HaplotypeScore=70.9977;InbreedingCoeff=0.8691;MQ=62.54;MQ0=5;MQRankSum=-0.925;QD=25.77;ReadPosRankSum=0.017;VQSLOD=3.0262;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:69.20:0,69,1077	0/0:7,0:7:18.06:0,18,297	0/0:28,0:16:12.30:0,12,147	0/0:34,0:21:24.08:0,24,389	0/0:11,0:11:24.08:0,24,396	0/0:11,0:11:15.05:0,15,238	0/0:21,0:21:45.14:0,45,715	0/0:20,0:19:24.05:0,24,349	0/0:15,0:15:33.11:0,33,544	0/0:25,0:25:69.23:0,69,1118	0/0:16,0:15:36.12:0,36,594	0/0:22,0:22:51.17:0,51,832	0/0:11,0:11:15.03:0,15,222	0/0:8,0:8:21.07:0,21,346	0/0:18,0:18:42.13:0,42,668	0/0:15,0:15:21.07:0,21,347	0/0:20,0:20:30.08:0,30,467	0/0:5,0:5:9.03:0,9,149	0/0:10,0:9:12.04:0,12,198	0/0:13,0:13:33.11:0,33,545	0/0:9,0:9:18.06:0,18,297	1/1:8,9:20:24.08:562,24,0	1/1:5,8:14:27.09:658,27,0	1/1:10,0:10:3.01:45,3,0	0/0:16,0:16:33.11:0,33,543	0/0:24,0:24:48.16:0,48,784	0/0:13,0:13:27.04:0,27,369	0/0:8,0:8:18.06:0,18,297
chr10	61841100	.	T	TACAC	510.63	PASS	AB=0.879;AC=10;AF=0.208;AN=48;BaseQRankSum=0.797;DP=583;FS=1.009;HRun=0;HaplotypeScore=108.7242;InbreedingCoeff=0.1075;MQ=65.32;MQ0=13;MQRankSum=-0.763;QD=2.66;ReadPosRankSum=-2.453;VQSLOD=1.8597;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:18.04:0,18,256	0/0:5,0:7:9:0,9,81	./.	./.	0/0:11,0:11:3.47:0,3,28	0/0:11,0:13:15.03:0,15,190	0/0:24,0:24:11.44:0,11,147	./.	1/1:13,4:21:2.96:70,3,0	0/0:28,0:28:0.71:0,1,37	0/0:8,0:8:3:0,3,28	0/0:22,0:22:18.05:0,18,258	0/0:14,0:18:5.67:0,6,55	0/0:16,0:16:6.02:0,6,87	0/0:25,0:25:15.02:0,15,191	0/0:16,0:18:27.08:0,27,378	0/0:31,0:32:23.52:0,24,302	0/1:20,0:21:26.65:27,0,347	0/1:17,0:16:0:0,0,0	./.	0/0:27,0:30:14.96:0,15,128	0/1:11,14:27:21.72:65,0,22	1/1:15,0:15:5.75:55,6,0	0/1:27,11:49:25.36:324,0,25	0/0:8,0:10:9.02:0,9,120	0/1:23,0:26:4.06:4,0,63	0/0:13,0:12:6.02:0,6,92	0/1:15,0:15:74.06:89,0,74
chr10	61845222	.	T	TAC	4777.71	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-3.334;DP=439;FS=3.618;HRun=0;HaplotypeScore=66.3613;InbreedingCoeff=0.9573;MQ=81.11;MQ0=11;MQRankSum=0.295;QD=17.83;ReadPosRankSum=-0.984;VQSLOD=4.5594;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:44.89:0,45,361	1/1:9,0:9:14.89:112,15,0	0/0:37,0:19:41.47:0,41,321	0/0:39,0:23:28.85:0,29,219	0/0:23,0:23:50.78:0,51,414	1/1:10,0:10:14.97:121,15,0	1/1:20,0:20:35.93:295,36,0	1/1:28,0:28:59.87:513,60,0	0/0:8,0:8:14.98:0,15,123	1/1:17,0:17:30:271,30,0	1/1:13,0:13:29.95:269,30,0	1/1:14,0:14:35.96:324,36,0	1/1:13,0:13:27.37:213,27,0	1/1:6,0:6:14.96:119,15,0	1/1:9,0:8:17.97:147,18,0	1/1:12,0:11:30.43:248,30,0	1/1:23,0:23:58.60:449,59,0	0/0:19,0:19:50.86:0,51,413	1/1:1,7:8:20.88:206,21,0	1/1:15,0:15:38.92:337,39,0	1/1:18,0:17:44.87:377,45,0	1/1:8,0:8:17.97:146,18,0	1/1:6,0:6:5.99:49,6,0	1/1:15,0:15:18.64:139,19,0	1/1:17,0:17:38.94:322,39,0	0/0:12,0:10:23.99:0,24,214	1/1:7,0:7:14.97:122,15,0	0/0:12,0:11:11.08:0,11,169
chr10	61845228	.	CAGAGAG	C	52.51	PASS	AC=4;AF=0.105;AN=38;BaseQRankSum=1.677;DP=443;FS=5.564;HRun=0;HaplotypeScore=108.0282;InbreedingCoeff=0.3058;MQ=74.47;MQ0=11;MQRankSum=-2.328;QD=1.42;ReadPosRankSum=1.627;VQSLOD=1.8195;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:8,0:8:0.81:0,1,2	./.	./.	0/0:23,0:23:0:0,0,0	./.	0/0:20,0:20:2.57:0,3,86	./.	0/0:8,0:8:2.97:0,3,20	0/0:13,0:13:3.01:0,3,82	0/0:12,0:12:6.02:0,6,142	0/0:14,0:14:3.01:0,3,83	0/0:14,0:14:2.83:0,3,61	0/0:6,0:6:3.01:0,3,90	0/0:8,0:7:3.01:0,3,58	0/0:12,0:11:9:0,9,171	0/0:23,0:23:12.03:0,12,232	1/1:17,4:22:4.96:99,5,0	0/0:12,0:12:10.28:0,10,229	0/0:14,0:14:6:0,6,106	0/0:22,0:21:9.03:0,9,221	./.	./.	1/1:11,0:15:2.61:41,3,0	./.	0/0:15,0:13:6.02:0,6,154	./.	0/0:17,0:16:24.05:0,24,443
chr10	61847553	.	AACAG	A	5074.83	PASS	AB=0.926;AC=35;AF=0.833;AN=42;BaseQRankSum=-3.113;DP=683;FS=16.924;HRun=0;HaplotypeScore=140.5958;InbreedingCoeff=0.4140;MQ=77.64;MQ0=0;MQRankSum=2.034;QD=11.56;ReadPosRankSum=-2.049;VQSLOD=2.8913;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	1/1:8,1:9:8.98:111,9,0	0/0:40,0:37:0:0,0,0	./.	./.	1/1:12,9:22:15.04:213,15,0	1/1:26,7:33:24.07:350,24,0	./.	0/0:11,0:20:2.96:0,3,19	1/1:19,7:26:21.06:303,21,0	1/1:9,8:17:14.84:228,15,0	1/1:21,12:33:21.07:323,21,0	1/1:6,6:12:15.05:231,15,0	1/1:14,5:19:17.89:277,18,0	1/1:25,8:34:41.92:593,42,0	1/1:13,13:26:30.10:462,30,0	1/1:13,24:37:46.36:670,46,0	1/1:14,0:15:5.80:39,6,0	1/1:14,2:16:6.02:92,6,0	1/1:19,10:29:14.80:171,15,0	1/1:22,22:43:36.12:555,36,0	./.	./.	0/0:25,0:26:0:0,0,0	1/1:12,10:22:15.05:231,15,0	0/1:23,0:25:39.78:40,0,49	1/1:11,9:20:12.04:185,12,0	./.
chr10	61847599	.	CAGACGGATAGAT	C	582.17	PASS	AB=0.893;AC=5;AF=0.089;AN=56;BaseQRankSum=5.237;DP=613;FS=0.000;HRun=0;HaplotypeScore=216.0350;InbreedingCoeff=0.2828;MQ=51.78;MQ0=7;MQRankSum=-3.553;QD=11.20;ReadPosRankSum=-1.510;VQSLOD=2.3577;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:34:3.08:0,3,7	0/0:6,0:6:18.04:0,18,335	0/0:30,0:12:36.12:0,36,760	0/0:20,0:14:42.14:0,42,939	0/0:15,0:15:2.87:0,3,21	0/0:21,0:19:32.51:0,33,972	0/0:31,0:31:87.01:0,87,1777	0/0:29,0:28:46.27:0,46,265	0/1:15,0:14:1.64:16,0,2	0/0:18,0:18:51.17:0,51,1307	0/0:15,0:15:39.09:0,39,819	0/0:25,0:25:30.28:0,30,1034	0/0:17,0:17:38.39:0,38,820	0/0:23,0:23:54.01:0,54,1237	0/0:29,0:29:84.22:0,84,2009	0/0:23,0:23:58.43:0,58,1378	0/0:37,0:37:66.77:0,67,1546	0/1:10,9:18:99:201,0,120	0/0:18,0:17:48.58:0,49,1198	0/0:22,0:22:7.40:0,7,741	0/0:53,0:53:99:0,99,2496	0/0:12,0:12:2.68:0,3,11	0/0:13,0:13:2.60:0,3,10	0/0:30,0:29:3.52:0,4,53	0/0:18,0:18:33.11:0,33,720	0/1:14,0:13:29.39:366,0,29	0/0:21,0:21:45.93:0,46,1184	1/1:4,0:3:5.33:111,5,0
chr10	61847609	.	GATAC	G	450.97	PASS	AB=0.987;AC=9;AF=0.161;AN=56;BaseQRankSum=1.537;DP=629;FS=5.579;HRun=0;HaplotypeScore=143.6888;InbreedingCoeff=0.4369;MQ=50.90;MQ0=8;MQRankSum=-4.409;QD=3.99;ReadPosRankSum=0.386;VQSLOD=2.3602;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:33:0.80:0,1,3	0/0:4,0:4:11.98:0,12,154	0/0:35,0:13:37.96:0,38,411	0/0:25,0:16:47.73:0,48,379	0/0:13,0:14:3.01:0,3,49	0/0:22,0:20:47.73:0,48,792	0/0:34,0:34:93.01:0,93,1649	0/1:23,0:23:99:149,0,186	0/0:15,0:14:0.22:0,0,0	0/0:20,0:20:59.36:0,59,1013	0/0:15,0:15:32.80:0,33,623	0/0:30,0:30:54.05:0,54,1169	0/0:19,0:19:41.75:0,42,767	0/0:23,0:23:54.03:0,54,924	0/0:28,0:28:72.06:0,72,1147	0/0:25,0:26:68.10:0,68,1062	0/0:36,0:36:36.16:0,36,1000	0/1:17,0:19:61.05:61,0,194	0/0:18,0:18:51.61:0,52,1063	0/0:20,0:20:26.29:0,26,658	0/0:53,0:53:99:0,107,2078	1/1:2,10:14:3.01:60,3,0	1/1:3,9:13:3.01:60,3,0	1/1:2,24:28:15.50:229,16,0	0/0:18,0:18:15.76:0,16,686	0/1:11,0:13:29.90:30,0,178	0/0:19,0:19:23.23:0,23,814	0/0:9,0:8:15.47:0,15,130
chr10	61847611	.	TAC	T	446.65	PASS	AB=0.919;AC=17;AF=0.304;AN=56;BaseQRankSum=3.316;DP=674;FS=17.463;HRun=0;HaplotypeScore=130.8484;InbreedingCoeff=-0.1589;MQ=50.13;MQ0=10;MQRankSum=2.478;QD=1.31;ReadPosRankSum=3.361;VQSLOD=1.4984;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:0.24:0,0,1	0/1:3,1:4:28.02:28,0,40	0/0:35,0:14:9.03:0,9,135	0/0:26,0:17:8.99:0,9,97	0/0:15,0:15:3.01:0,3,46	0/1:22,2:22:53.53:54,0,352	0/1:35,3:38:94.97:95,0,811	0/0:30,0:29:19.85:0,20,257	0/1:16,0:15:6.18:6,0,18	0/0:22,0:21:24.12:0,24,448	0/0:14,0:14:21.07:0,21,318	0/1:29,1:30:2.43:2,0,760	0/0:21,0:21:17.45:0,17,507	0/1:20,4:24:57.02:57,0,469	0/1:22,6:28:99:119,0,459	0/1:23,2:26:60.02:60,0,404	0/1:34,1:37:40.27:40,0,510	0/0:21,0:20:20.98:0,21,206	0/0:21,0:20:39.55:0,40,541	0/1:19,1:20:7.44:7,0,295	0/0:53,1:55:50.76:0,51,1084	1/1:14,0:14:2.84:14,3,0	1/1:13,0:13:2.84:14,3,0	0/1:29,0:28:10.03:14,0,10	0/1:18,1:19:15.06:15,0,358	0/0:20,0:20:42.22:0,42,319	0/1:17,3:20:71.17:71,0,438	0/0:11,0:10:24.82:0,25,211
chr10	61848021	.	TTA	T	628.88	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=10.179;DP=699;FS=1.129;HRun=0;HaplotypeScore=112.2006;InbreedingCoeff=0.8455;MQ=83.41;MQ0=0;MQRankSum=-0.104;QD=11.23;ReadPosRankSum=0.673;VQSLOD=3.2730;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:75.23:0,75,1142	0/0:13,0:13:39.11:0,39,671	0/0:29,0:29:11.78:0,12,881	0/0:22,0:22:21.70:0,22,841	0/0:22,0:22:60.21:0,60,1122	0/0:19,0:19:57.20:0,57,1061	0/0:30,0:30:90.31:0,90,1667	0/0:27,0:27:78.26:0,78,1312	0/0:21,0:21:60.68:0,61,977	0/0:22,0:22:63.20:0,63,1151	0/0:22,0:22:66.20:0,66,1174	0/0:35,0:35:96.33:0,96,1826	0/0:22,0:22:62.98:0,63,1177	0/0:37,0:37:99:0,102,1882	0/0:39,0:39:99:0,114,2114	0/0:31,0:31:93.29:0,93,1704	0/0:23,0:23:69.21:0,69,1276	0/0:15,0:15:39.13:0,39,554	0/0:13,0:13:39.13:0,39,728	0/0:32,0:32:96.33:0,96,1810	0/0:54,0:54:99:0,163,2995	1/1:22,4:26:38.97:429,39,0	1/1:14,0:14:0.38:141,0,0	1/1:16,0:16:5.92:180,6,0	0/0:18,0:18:54.19:0,54,1013	0/0:28,0:28:81.19:0,81,1323	0/0:28,0:27:84.29:0,84,1609	0/0:11,0:11:33.11:0,33,523
chr10	61848023	.	AT	A	814.95	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=10.503;DP=684;FS=1.035;HRun=2;HaplotypeScore=96.2102;InbreedingCoeff=0.9784;MQ=82.89;MQ0=0;MQRankSum=-4.176;QD=14.30;ReadPosRankSum=0.345;VQSLOD=3.0707;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:26:71.52:0,72,696	0/0:12,0:12:36.08:0,36,519	0/0:27,1:29:47.76:0,48,756	0/0:22,0:22:13.29:0,13,667	0/0:22,0:22:62.97:0,63,795	0/0:19,0:19:57.13:0,57,812	0/0:30,0:30:90.22:0,90,1286	0/0:25,0:25:62.36:0,62,456	0/0:21,0:21:39.48:0,39,168	0/0:20,0:20:57.18:0,57,870	0/0:22,0:22:40.52:0,41,902	0/0:34,0:34:96.28:0,96,1441	0/0:22,0:22:62.95:0,63,892	0/0:34,0:34:99:0,101,1461	0/0:37,0:37:99:0,106,1618	0/0:31,0:31:93.24:0,93,1353	0/0:22,0:22:66.19:0,66,1003	0/0:14,0:14:38.96:0,39,365	0/0:13,0:13:39.10:0,39,572	0/0:33,0:33:90.84:0,91,1377	0/0:54,0:54:99:0,151,2342	1/1:8,18:26:61.66:419,62,0	1/1:3,11:14:12.46:221,12,0	1/1:7,10:17:43.44:315,43,0	0/0:18,0:18:54.16:0,54,807	0/0:28,0:28:55.31:0,55,326	0/0:28,0:27:84.27:0,84,1302	0/0:11,0:11:17.75:0,18,99
chr10	61848024	.	T	TC	786.96	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=10.109;DP=681;FS=0.664;HRun=8;HaplotypeScore=97.6134;InbreedingCoeff=0.9273;MQ=82.41;MQ0=0;MQRankSum=-1.244;QD=5.39;ReadPosRankSum=-2.835;VQSLOD=0.3038;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:18,7:25:19.92:290,20,0	0/0:12,0:12:30.01:0,30,275	0/0:28,0:28:46.71:0,47,394	0/1:22,0:22:1.32:1,0,308	0/0:22,0:22:45.31:0,45,247	0/0:20,0:20:45.02:0,45,412	0/0:31,0:31:58.50:0,59,613	1/1:25,0:25:26.33:154,26,0	1/1:21,0:21:16.42:37,16,0	0/0:20,0:20:54.03:0,54,494	0/0:20,0:21:56.06:0,56,500	0/0:34,0:34:87.04:0,87,796	0/0:24,0:24:48:0,48,439	0/0:32,0:32:86.99:0,87,788	0/0:36,0:37:98.09:0,98,884	0/0:31,0:31:83.99:0,84,753	0/0:22,0:22:60.02:0,60,549	1/1:5,9:14:20.45:297,20,0	0/0:13,0:13:33.02:0,33,302	0/0:32,0:33:86.07:0,86,774	0/0:50,1:53:99:0,114,1261	0/0:25,0:25:45.45:0,45,146	0/0:14,0:14:28.28:0,28,113	0/0:17,0:17:28.12:0,28,92	0/0:18,0:18:48.02:0,48,439	1/1:28,0:28:25.44:139,25,0	0/0:28,0:27:81.03:0,81,737	1/1:11,0:11:10.76:52,11,0
chr10	61848032	.	CA	C	4371.89	PASS	AB=0.533;AC=17;AF=0.304;AN=56;BaseQRankSum=12.896;DP=663;FS=4.470;HRun=1;HaplotypeScore=83.2698;InbreedingCoeff=0.9150;MQ=76.63;MQ0=0;MQRankSum=-3.613;QD=24.84;ReadPosRankSum=-2.017;VQSLOD=4.2074;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:20,1:21:36.50:257,37,0	0/0:10,0:10:30.10:0,30,428	0/0:20,0:20:60.05:0,60,755	0/0:21,0:21:33.41:0,33,631	0/0:19,0:19:0.43:0,0,73	0/0:17,0:17:51.13:0,51,675	0/0:33,0:33:96.16:0,96,1185	1/1:0,24:24:72.10:844,72,0	1/1:3,18:21:60.65:803,61,0	0/0:27,0:27:78.12:0,78,974	0/0:22,0:22:60.99:0,61,823	0/0:32,0:32:90.25:0,90,1243	0/0:20,0:20:57.65:0,58,790	0/0:32,0:32:93.22:0,93,1268	0/0:34,0:34:96.88:0,97,1376	0/0:28,0:28:84.24:0,84,1133	0/0:20,0:20:60.20:0,60,853	1/1:13,0:13:22.66:160,23,0	0/0:17,0:17:51.12:0,51,632	0/0:32,0:32:90.84:0,91,1272	0/0:57,0:57:99:0,160,2111	1/1:8,20:28:64.55:475,65,0	0/1:2,14:16:0.89:190,0,1	1/1:6,10:16:44.61:331,45,0	0/0:16,0:16:48.16:0,48,686	1/1:0,26:26:72.20:944,72,0	0/0:30,0:29:90.23:0,90,1208	1/1:0,11:11:27.09:368,27,0
chr10	61850523	.	TAC	T	2365.08	PASS	AB=0.778;AC=30;AF=0.556;AN=54;BaseQRankSum=-0.096;DP=590;FS=5.571;HRun=0;HaplotypeScore=92.7922;InbreedingCoeff=0.6783;MQ=65.41;MQ0=10;MQRankSum=4.691;QD=7.46;ReadPosRankSum=3.597;VQSLOD=2.6101;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:48:45.48:0,45,375	1/1:4,3:7:9.02:100,9,0	0/0:32,0:19:3.01:0,3,42	./.	0/0:22,0:22:4.69:0,5,17	1/1:7,11:18:17.71:161,18,0	1/1:7,11:19:9.02:99,9,0	0/0:18,0:15:14.90:0,15,156	0/0:16,0:16:15.05:0,15,191	1/1:9,13:23:19.71:309,20,0	1/1:12,7:19:8.97:85,9,0	1/1:9,15:24:30.08:332,30,0	1/1:11,3:16:26.63:225,27,0	1/1:7,12:20:38.89:398,39,0	1/1:6,9:16:23.90:246,24,0	1/1:6,7:14:8.86:80,9,0	0/1:35,5:40:15.62:16,0,520	0/0:14,0:20:11.90:0,12,86	1/1:12,4:16:8.29:86,8,0	1/1:12,7:19:3:26,3,0	1/1:17,9:25:11.86:113,12,0	0/0:23,0:23:11.74:0,12,115	0/0:16,0:22:9.76:0,10,58	0/0:15,0:20:5.88:0,6,48	1/1:2,10:12:12.03:133,12,0	0/0:20,0:20:15.28:0,15,172	0/1:12,10:23:55.60:156,0,56	0/0:4,0:4:7.73:0,8,43
chr10	61852981	.	TCTGC	T	678.23	PASS	AB=0.857;AC=7;AF=0.125;AN=56;BaseQRankSum=5.569;DP=388;FS=3.277;HRun=0;HaplotypeScore=63.3615;InbreedingCoeff=0.3041;MQ=70.59;MQ0=5;MQRankSum=2.021;QD=7.45;ReadPosRankSum=1.744;VQSLOD=1.6898;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:27.05:0,27,527	0/0:7,0:6:15.05:0,15,355	0/0:21,0:18:11.94:0,12,104	0/0:17,0:13:10.58:0,11,139	0/0:6,0:6:9.02:0,9,112	0/0:8,0:7:15.05:0,15,289	0/0:25,0:22:51.12:0,51,1150	0/0:14,0:13:15.05:0,15,322	0/0:7,0:6:12.04:0,12,295	0/0:10,0:10:18.06:0,18,407	0/0:5,0:5:6.02:0,6,118	0/0:12,0:12:27.09:0,27,633	0/0:5,0:5:9.01:0,9,211	0/0:14,0:14:30.10:0,30,696	0/0:5,0:4:9.03:0,9,196	0/0:6,0:5:18.06:0,18,434	0/0:31,0:28:63.20:0,63,1377	0/0:30,0:30:69.24:0,69,1576	0/0:16,0:13:12.04:0,12,268	0/0:8,0:8:6.02:0,6,147	0/1:52,2:51:3.45:3,0,1982	1/1:1,3:4:3.01:50,3,0	1/1:4,0:4:3.01:38,3,0	0/1:7,13:20:22.62:693,0,23	0/0:17,0:17:27.08:0,27,600	0/1:9,0:9:1.46:1,0,212	0/0:5,0:5:9.03:0,9,221	0/0:12,0:12:15.04:0,15,255
chr10	61853214	.	GC	G	953.48	PASS	AC=8;AF=0.222;AN=36;BaseQRankSum=3.647;DP=318;FS=2.741;HRun=2;HaplotypeScore=42.7216;InbreedingCoeff=0.6487;MQ=45.26;MQ0=33;MQRankSum=-1.975;QD=23.26;ReadPosRankSum=2.024;VQSLOD=3.6207;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,1:1:3.01:39,3,0	./.	./.	0/0:7,1:1:0.47:0,0,1	./.	./.	0/0:57,0:48:99:0,136,1952	0/0:4,0:1:3:0,3,25	1/1:2,4:3:9.03:117,9,0	0/0:5,0:1:3.01:0,3,45	./.	0/0:19,0:15:29.85:0,30,410	0/0:8,0:7:13.24:0,13,139	0/0:10,0:8:17.80:0,18,250	0/0:8,0:7:12.04:0,12,180	0/0:8,0:6:12.04:0,12,176	0/0:26,2:25:18.51:0,19,697	1/1:2,30:28:34.06:879,34,0	0/0:4,0:2:2.99:0,3,23	./.	0/0:54,2:32:8.55:0,9,131	./.	./.	0/0:41,1:37:95.74:0,96,1436	./.	./.	0/0:6,0:5:15.05:0,15,224	1/1:0,1:1:3.01:39,3,0
chr10	61853278	.	T	TG	2025.99	PASS	AB=0.731;AC=16;AF=0.333;AN=48;BaseQRankSum=6.075;DP=340;FS=89.603;HRun=0;HaplotypeScore=60.5750;InbreedingCoeff=-0.2685;MQ=56.39;MQ0=5;MQRankSum=-6.740;QD=10.39;ReadPosRankSum=-1.576;VQSLOD=0.0942;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:2,3:5:32.84:81,0,33	./.	0/0:18,0:9:5.63:0,6,201	0/0:20,0:12:2.77:0,3,200	0/0:6,0:6:11.84:0,12,155	1/1:0,3:3:3.01:42,3,0	0/1:36,11:44:99:108,0,981	./.	0/1:7,9:16:99:420,0,189	0/1:11,2:12:89.97:90,0,234	0/0:3,0:3:6.02:0,6,84	0/1:10,8:17:99:328,0,187	0/1:7,4:10:99:114,0,108	0/1:7,5:12:99:199,0,177	0/0:3,2:4:6.02:0,6,84	0/1:4,7:11:99:295,0,135	0/1:14,10:25:99:261,0,480	0/1:15,1:14:37.56:38,0,305	0/0:8,1:7:7.18:0,7,205	./.	0/0:29,8:33:31.43:0,31,440	0/0:2,0:2:2.80:0,3,42	0/1:6,1:6:12.22:12,0,114	0/0:33,0:33:53.82:0,54,682	0/1:2,2:3:35.94:39,0,36	0/0:9,0:8:14.37:0,14,219	1/1:0,4:4:9.03:143,9,0	./.
chr10	61853303	.	CCTG	C	112.16	PASS	AB=0.633;AC=2;AF=0.037;AN=54;BaseQRankSum=1.175;DP=394;FS=7.431;HRun=0;HaplotypeScore=74.7462;InbreedingCoeff=-0.0671;MQ=49.06;MQ0=16;MQRankSum=2.317;QD=9.35;ReadPosRankSum=1.008;VQSLOD=2.2611;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:5:15.05:0,15,267	./.	0/0:10,0:5:8.48:0,8,102	0/0:12,0:8:11.72:0,12,170	0/0:3,0:3:4.26:0,4,58	0/0:5,0:5:12.04:0,12,223	0/0:56,0:51:99:0,110,1581	0/0:4,0:4:10.09:0,10,106	0/0:16,0:16:48.16:0,48,827	0/0:17,0:13:32.40:0,32,457	0/0:4,0:4:6.02:0,6,110	0/0:22,0:21:50.09:0,50,856	0/0:14,0:12:19.95:0,20,356	0/0:15,0:15:38.16:0,38,616	0/0:8,0:6:12.04:0,12,232	0/0:16,0:15:39.13:0,39,650	0/0:26,0:25:53.21:0,53,916	0/0:19,0:17:45.15:0,45,836	0/0:14,0:8:19.71:0,20,203	0/0:1,0:1:3.01:0,3,55	0/0:44,0:37:43.65:0,44,720	0/1:2,4:6:25.17:135,0,25	0/1:3,3:5:65.11:65,0,65	0/0:37,0:35:23.73:0,24,288	0/0:8,0:5:8.60:0,9,141	0/0:12,0:10:17.61:0,18,271	0/0:6,0:6:15.05:0,15,274	0/0:6,0:6:12.31:0,12,129
chr10	61853306	.	G	GCTGC	990.77	PASS	AB=0.966;AC=16;AF=0.296;AN=54;BaseQRankSum=7.509;DP=406;FS=19.294;HRun=0;HaplotypeScore=87.0128;InbreedingCoeff=-0.1755;MQ=49.33;MQ0=17;MQRankSum=-6.614;QD=4.70;ReadPosRankSum=8.525;VQSLOD=-0.4578;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:6,0:5:7.48:7,0,134	./.	0/0:10,0:5:6.01:0,6,69	0/0:9,0:6:5.99:0,6,97	0/0:2,0:2:3.01:0,3,49	0/1:5,0:5:8.61:9,0,136	0/0:57,0:53:33.47:0,33,812	0/0:4,0:4:6.02:0,6,88	0/1:16,0:16:99:114,0,169	0/1:21,0:16:64.50:64,0,210	0/0:5,0:5:5.76:0,6,98	0/1:24,0:23:99:125,0,294	0/1:14,0:12:7.91:8,0,179	0/1:14,0:14:55.63:56,0,236	0/0:9,0:7:12.04:0,12,197	0/1:16,0:15:82.42:82,0,179	0/1:27,0:26:60.31:60,0,398	0/0:21,0:18:42.05:0,42,618	0/0:14,0:8:6.01:0,6,99	0/0:3,0:3:6.02:0,6,88	0/0:43,0:36:32.17:0,32,497	1/1:5,0:5:9.03:147,9,0	1/1:6,0:5:6.02:122,6,0	0/1:12,24:37:34.27:278,0,34	0/0:9,0:6:11.54:0,12,147	0/1:11,0:9:16.29:16,0,126	0/1:7,0:7:53.03:53,0,84	0/0:6,0:6:6.02:0,6,99
chr10	61856448	.	CA	C	1329.40	PASS	AB=0.822;AC=19;AF=0.339;AN=56;BaseQRankSum=6.443;DP=622;FS=5.423;HRun=15;HaplotypeScore=76.3110;InbreedingCoeff=0.4708;MQ=72.44;MQ0=2;MQRankSum=1.063;QD=4.52;ReadPosRankSum=6.206;VQSLOD=1.5703;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:26,16:48:36.92:310,37,0	0/0:7,0:8:17.95:0,18,144	0/1:26,3:24:6.85:7,0,106	0/1:12,0:10:15.26:15,0,52	0/1:10,9:20:8.99:66,0,9	0/0:23,1:25:38.83:0,39,328	0/0:22,1:23:25.69:0,26,339	0/1:21,3:26:6.42:6,0,210	1/1:7,11:20:21.61:127,22,0	0/0:20,0:21:26.83:0,27,223	0/0:20,0:20:32.85:0,33,263	0/0:22,0:24:37.83:0,38,330	0/0:15,1:17:6.73:0,7,184	0/0:16,2:18:0.36:0,0,222	0/0:26,1:27:26.94:0,27,337	0/0:20,0:23:32.79:0,33,268	0/0:32,0:34:41.06:0,41,364	0/1:9,8:18:3.76:97,0,4	0/0:19,0:20:20.75:0,21,159	0/0:23,2:25:11.93:0,12,203	0/0:12,3:15:4.71:0,5,158	1/1:5,15:20:14.91:223,15,0	1/1:11,9:20:21.76:138,22,0	1/1:9,22:32:52.17:333,52,0	0/1:16,2:19:7.42:7,0,163	0/1:13,7:20:2.86:110,0,3	0/0:27,0:28:34.12:0,34,259	1/1:3,7:10:11.76:77,12,0
chr10	61857260	.	G	GC	9259.87	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-14.427;DP=637;FS=1.754;HRun=1;HaplotypeScore=62.7952;InbreedingCoeff=0.9823;MQ=93.22;MQ0=0;MQRankSum=-4.130;QD=40.79;ReadPosRankSum=0.752;VQSLOD=5.4115;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,41:44:99:1778,120,0	0/0:2,0:2:6.02:0,6,78	0/0:26,0:27:65.22:0,65,786	0/0:31,0:30:79.49:0,79,990	1/1:1,13:14:39.13:584,39,0	0/0:21,0:21:63.19:0,63,802	0/0:24,0:24:69.22:0,69,895	1/1:2,36:38:99:1562,108,0	1/1:0,21:21:63.21:944,63,0	0/0:13,0:13:36.12:0,36,462	0/0:10,0:10:27.09:0,27,350	0/0:25,0:25:75.24:0,75,971	0/0:31,0:31:93.29:0,93,1192	0/0:21,0:21:63.20:0,63,815	0/0:23,0:23:66.21:0,66,857	0/0:26,0:26:78.25:0,78,1012	0/0:42,0:42:99:0,114,1480	1/1:0,30:30:84.28:1248,84,0	0/0:25,0:25:72.23:0,72,934	0/0:10,0:10:27.09:0,27,351	0/0:38,0:38:99:0,111,1411	1/1:1,11:12:30.10:450,30,0	1/1:0,8:8:21.07:315,21,0	1/1:0,30:30:81.24:1190,81,0	0/0:18,0:18:54.18:0,54,701	1/1:0,21:21:63.17:919,63,0	0/0:23,0:23:60.20:0,60,780	1/1:2,7:9:18.06:270,18,0
chr10	61858669	.	TACAC	T	1272.43	PASS	AB=0.870;AC=18;AF=0.360;AN=50;BaseQRankSum=-1.046;DP=570;FS=0.796;HRun=0;HaplotypeScore=112.4254;InbreedingCoeff=0.4274;MQ=63.60;MQ0=16;MQRankSum=2.130;QD=6.18;ReadPosRankSum=0.439;VQSLOD=2.2698;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:43:11.27:0,11,176	./.	./.	./.	0/0:18,0:17:8.75:0,9,69	0/1:17,2:19:11.96:146,0,12	1/1:13,11:24:8.96:110,9,0	0/0:17,0:17:8.94:0,9,73	0/0:26,0:25:8.99:0,9,163	0/0:22,0:22:31.94:0,32,461	0/0:12,0:12:21.05:0,21,405	1/1:9,3:13:6.02:79,6,0	0/1:11,4:15:14.92:81,0,15	0/0:9,0:9:2.72:0,3,12	1/1:10,3:13:8.99:113,9,0	0/1:8,3:11:6.51:84,0,7	1/1:12,9:21:20.72:325,21,0	0/0:11,0:11:15.05:0,15,272	0/0:10,0:10:1.55:0,2,4	1/1:7,3:10:3.01:47,3,0	0/1:43,0:42:38.43:167,0,38	0/0:23,0:23:12.34:0,12,139	0/0:13,0:13:6:0,6,86	0/0:31,0:31:6.02:0,6,103	1/1:15,2:18:2.13:119,2,0	0/0:28,0:28:40.37:0,40,676	1/1:16,2:19:8.04:165,8,0	0/0:10,0:8:6.02:0,6,103
chr10	61858670	.	A	ACACACACT	3771.50	PASS	AB=0.900;AC=20;AF=0.357;AN=56;BaseQRankSum=2.410;DP=591;FS=3.463;HRun=0;HaplotypeScore=158.5542;InbreedingCoeff=0.6658;MQ=61.26;MQ0=16;MQRankSum=-1.885;QD=12.25;ReadPosRankSum=1.689;VQSLOD=2.8971;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:49,0:46:41.16:492,41,0	0/0:7,0:7:8.96:0,9,70	0/0:36,0:17:32.21:0,32,354	0/0:40,0:20:33.04:0,33,360	1/1:19,0:18:20.99:250,21,0	0/1:19,0:19:70.84:71,0,255	0/0:24,0:24:19.30:0,19,233	1/1:17,0:17:38.54:315,39,0	1/1:28,0:27:47.40:606,47,0	0/0:22,0:22:33.90:0,34,508	0/0:14,0:14:29.59:0,30,286	0/0:13,0:13:24:0,24,273	0/0:15,0:15:32.87:0,33,349	0/0:10,0:9:4.17:0,4,73	0/0:14,0:14:3.38:0,3,211	0/0:11,0:11:19.69:0,20,268	0/0:21,0:21:20.41:0,20,586	1/1:12,0:12:8.90:464,9,0	0/0:9,0:9:4.03:0,4,104	0/0:10,0:10:17.99:0,18,186	0/1:44,0:43:67.32:67,0,411	1/1:26,0:26:30.02:361,30,0	0/1:5,10:15:0:0,0,0	1/1:11,21:38:6.02:258,6,0	0/0:18,0:18:21.20:0,21,343	1/1:28,0:28:38.37:767,38,0	0/0:19,0:19:18.82:0,19,385	0/1:10,0:8:2.99:120,0,3
chr10	61858676	.	A	ACT	1937	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=0.601;DP=616;FS=0.000;HRun=0;HaplotypeScore=106.5672;InbreedingCoeff=0.3608;MQ=52.20;MQ0=19;MQRankSum=-1.244;QD=7.97;ReadPosRankSum=2.954;VQSLOD=3.2535;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:44,0:41:20.44:439,20,0	0/0:7,0:7:14.93:0,15,115	0/0:32,0:13:32.21:0,32,354	0/0:33,0:14:33.04:0,33,360	0/1:24,0:23:41.87:181,0,42	0/0:25,0:25:38.89:0,39,404	0/0:29,0:29:38.76:0,39,311	0/1:17,0:17:11.30:256,0,11	1/1:25,4:28:30.21:392,30,0	0/0:24,0:23:64.30:0,64,630	0/0:16,0:16:38.99:0,39,382	0/0:15,0:15:23.65:0,24,199	0/0:16,0:16:32.94:0,33,270	0/0:12,0:11:17.31:0,17,140	0/0:15,0:15:13.27:0,13,181	0/0:12,0:12:26.95:0,27,222	0/0:27,0:26:54.26:0,54,422	0/1:11,0:11:13.12:138,0,13	0/0:11,0:11:12.97:0,13,173	0/0:10,0:10:17.96:0,18,146	0/0:54,0:52:98.96:0,99,811	1/1:23,0:23:26.95:202,27,0	0/1:12,0:12:6.17:6,0,17	0/1:40,0:37:47.47:47,0,71	0/0:18,0:18:41.81:0,42,330	0/1:33,0:33:99:325,0,169	0/0:16,0:16:40.90:0,41,311	0/1:10,0:8:3.03:120,0,3
chr10	61858701	.	C	CGG	48.72	PASS	AB=0.623;AC=1;AF=0.018;AN=56;BaseQRankSum=2.935;DP=648;FS=6.758;HRun=0;HaplotypeScore=108.9640;InbreedingCoeff=-0.0261;MQ=50.81;MQ0=20;MQRankSum=-0.991;QD=1.48;ReadPosRankSum=0.574;VQSLOD=1.1572;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:47:72.61:0,73,1019	0/0:5,0:5:15.03:0,15,204	0/0:17,0:8:17.58:0,18,242	0/0:38,0:14:21.10:0,21,429	0/0:24,0:23:39.02:0,39,550	0/0:27,0:27:64.34:0,64,858	0/0:32,0:32:63.14:0,63,842	0/0:20,0:19:54.17:0,54,746	0/1:13,17:32:99:123,0,113	0/0:25,0:24:69.21:0,69,1017	0/0:15,0:15:36.12:0,36,558	0/0:19,0:19:45.09:0,45,579	0/0:14,0:14:26.91:0,27,357	0/0:13,0:12:18.05:0,18,254	0/0:13,0:13:26.72:0,27,332	0/0:15,0:15:42.09:0,42,562	0/0:29,0:28:70.47:0,70,843	0/0:14,0:14:42.14:0,42,586	0/0:15,0:13:37.82:0,38,501	0/0:12,0:12:30.06:0,30,392	0/0:62,0:59:99:0,121,1755	0/0:23,0:23:30.35:0,30,386	0/0:12,0:12:2.88:0,3,171	0/0:43,0:40:44.61:0,45,608	0/0:17,0:17:39.04:0,39,484	0/0:35,0:35:96.21:0,96,1273	0/0:17,0:17:48.05:0,48,571	0/0:9,0:7:21.07:0,21,307
chr10	61859544	.	C	CGT	1509.20	PASS	AB=0.787;AC=6;AF=0.107;AN=56;BaseQRankSum=-6.898;DP=798;FS=4.676;HRun=0;HaplotypeScore=105.6691;InbreedingCoeff=0.2428;MQ=60.47;MQ0=7;MQRankSum=1.063;QD=10.48;ReadPosRankSum=1.552;VQSLOD=3.3167;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:56:99:0,110,1141	0/0:19,0:20:16.98:0,17,411	0/1:30,0:15:11.35:11,0,156	0/0:31,0:14:4.79:0,5,99	0/0:20,0:24:47.81:0,48,527	0/0:21,0:22:57.07:0,57,625	0/0:24,0:25:44.94:0,45,492	0/1:28,0:28:9.76:10,0,419	0/0:24,0:26:23.54:0,24,670	0/0:27,1:30:17.76:0,18,586	0/0:15,0:15:36.01:0,36,384	0/0:25,0:26:59.03:0,59,600	0/0:24,0:26:53.97:0,54,598	0/0:28,0:32:71.81:0,72,756	0/0:16,0:21:38.68:0,39,369	0/0:20,0:20:39.11:0,39,453	0/0:23,0:25:59.74:0,60,627	0/0:33,0:33:80.97:0,81,906	0/0:29,0:33:52.85:0,53,499	0/0:18,0:25:56.14:0,56,526	0/0:58,0:67:99:0,125,1294	1/1:7,22:31:25.20:604,25,0	0/1:4,12:16:41.26:352,0,41	0/1:10,27:37:85.17:659,0,85	0/0:20,0:20:48.11:0,48,556	0/0:35,0:39:83.06:0,83,860	0/0:16,0:19:32.59:0,33,328	0/0:16,0:16:36:0,36,408
chr10	61861637	.	GCACACA	G	408.17	PASS	AB=0.804;AC=8;AF=0.182;AN=44;BaseQRankSum=4.835;DP=556;FS=11.387;HRun=0;HaplotypeScore=113.2067;InbreedingCoeff=0.4737;MQ=60.58;MQ0=15;MQRankSum=-1.985;QD=4.64;ReadPosRankSum=-0.077;VQSLOD=1.5966;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,13:42:3.01:0,3,70	0/0:7,0:7:3.01:0,3,70	./.	./.	0/0:10,5:15:0:0,0,0	0/0:23,0:24:39.13:0,39,1061	0/0:24,0:25:22.20:0,22,781	0/0:19,0:19:5.95:0,6,42	1/1:12,1:14:9.91:171,10,0	0/0:24,0:23:27.09:0,27,538	0/0:11,0:11:6.02:0,6,174	0/0:24,0:23:30.10:0,30,730	0/0:19,0:19:14.08:0,14,276	0/0:19,0:19:6.02:0,6,135	0/0:14,0:17:30.10:0,30,790	0/0:20,0:20:20.28:0,20,468	0/0:26,0:28:54.17:0,54,1288	0/1:18,4:23:44.23:207,0,44	0/0:18,0:18:5.91:0,6,110	./.	0/0:48,0:46:43.03:0,43,1210	1/1:16,0:19:5.42:83,5,0	0/1:8,0:11:0.04:0,0,0	./.	0/0:14,1:21:0.78:0,1,34	1/1:15,0:20:6:65,6,0	./.	./.
chr10	61862723	.	C	CA	671.57	PASS	AB=0.845;AC=14;AF=0.259;AN=54;BaseQRankSum=-1.832;DP=541;FS=3.709;HRun=15;HaplotypeScore=69.1857;InbreedingCoeff=0.1956;MQ=51.42;MQ0=15;MQRankSum=1.054;QD=3.08;ReadPosRankSum=-2.143;VQSLOD=-0.2666;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,3:49:18.13:0,18,317	0/0:7,0:8:7.81:0,8,42	./.	0/1:6,0:5:2.92:19,0,3	0/1:34,1:36:47.73:48,0,128	0/0:16,0:21:34.40:0,34,185	0/1:14,2:16:20.92:21,0,114	0/1:10,8:20:18.46:97,0,18	0/1:7,0:8:12.04:15,0,12	0/0:19,0:21:19.27:0,19,111	0/0:9,0:10:10.67:0,11,58	0/0:19,0:19:23.10:0,23,139	0/0:12,0:12:9.56:0,10,102	0/0:14,0:15:15.13:0,15,79	0/0:18,0:17:0.30:0,0,115	0/0:15,0:17:22.42:0,22,131	0/0:30,0:34:15.32:0,15,110	0/0:19,0:20:24.36:0,24,117	0/0:13,0:13:4.34:0,4,107	0/0:22,0:22:22.40:0,22,130	0/0:11,0:13:19.50:0,20,113	1/1:11,6:17:8.95:69,9,0	1/1:8,6:14:17.94:145,18,0	0/1:23,10:33:30.52:206,0,31	0/0:13,4:19:23.99:0,24,136	0/1:18,8:24:3.37:170,0,3	0/1:23,3:25:12.87:13,0,154	1/1:10,3:12:3:26,3,0
chr10	61863569	.	G	GTGTGTGTA	2517.15	PASS	AB=0.873;AC=19;AF=0.339;AN=56;BaseQRankSum=4.936;DP=695;FS=9.334;HRun=0;HaplotypeScore=168.1727;InbreedingCoeff=-0.2972;MQ=55.84;MQ0=13;MQRankSum=0.820;QD=6.09;ReadPosRankSum=9.668;VQSLOD=0.4436;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:8,21:37:17.88:356,0,18	0/1:6,0:6:6.54:7,0,56	0/0:36,0:18:35.42:0,35,299	0/0:25,0:13:23.67:0,24,232	0/1:6,23:33:9.12:63,0,9	0/1:18,0:18:99:111,0,115	0/0:30,0:30:19.13:0,19,306	0/0:26,0:26:66.84:0,67,539	0/1:10,20:32:37.09:493,0,37	0/1:17,0:16:27.63:28,0,227	0/1:14,0:14:28.30:28,0,114	0/1:25,0:25:74.31:74,0,125	0/1:22,0:22:68.68:69,0,126	0/1:21,0:21:32.59:33,0,148	0/0:15,0:15:1.26:0,1,245	0/1:28,0:28:58.23:58,0,205	0/1:27,0:27:56.08:56,0,207	0/1:3,8:12:0.32:318,0,0	0/1:23,0:21:15.22:15,0,221	0/1:23,0:23:76.83:77,0,110	0/0:60,0:58:45.42:0,45,498	0/0:21,0:19:32.94:0,33,401	0/0:20,0:20:38.99:0,39,488	0/0:22,0:22:26.88:0,27,275	0/1:24,0:24:21.52:22,0,164	1/1:5,26:33:18.71:740,19,0	0/0:27,0:26:13.46:0,13,256	0/1:4,9:16:14.35:132,0,14
chr10	61864463	.	C	CA	4697.94	PASS	AB=0.738;AC=20;AF=0.357;AN=56;BaseQRankSum=-4.158;DP=604;FS=1.209;HRun=9;HaplotypeScore=61.3788;InbreedingCoeff=0.8157;MQ=68.18;MQ0=16;MQRankSum=1.161;QD=21.65;ReadPosRankSum=0.271;VQSLOD=5.5793;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,34:36:87.07:943,87,0	0/0:10,0:11:29.03:0,29,240	0/0:50,0:17:7.54:0,8,103	0/0:44,0:15:11.46:0,11,125	1/1:5,20:26:59.99:642,60,0	0/0:8,0:8:20.99:0,21,182	0/0:20,0:22:56.02:0,56,475	1/1:7,29:34:71.91:743,72,0	1/1:2,11:13:24.06:265,24,0	0/0:26,0:26:62.97:0,63,547	0/0:12,0:12:32.99:0,33,287	0/0:16,0:16:41.98:0,42,364	0/0:16,0:15:35.97:0,36,308	0/0:17,0:18:50.03:0,50,422	0/0:18,0:18:47.98:0,48,417	0/1:9,1:10:12.09:12,0,131	0/0:32,0:30:80.98:0,81,702	1/1:8,18:23:48.13:531,48,0	0/0:24,0:22:41.91:0,42,354	0/0:25,0:25:62.95:0,63,541	0/0:19,0:17:50.99:0,51,442	1/1:2,8:11:3.90:227,4,0	1/1:0,8:8:21.06:231,21,0	1/1:6,17:22:57.13:620,57,0	0/0:20,0:20:56.98:0,57,494	0/1:4,12:17:7.18:351,0,7	0/0:26,0:26:62.97:0,63,547	1/1:2,8:10:12.03:133,12,0
chr10	61864663	.	AAGAG	A	3130.52	PASS	AB=0.773;AC=36;AF=0.692;AN=52;BaseQRankSum=2.331;DP=583;FS=10.247;HRun=0;HaplotypeScore=114.1184;InbreedingCoeff=0.5109;MQ=59.78;MQ0=17;MQRankSum=-2.808;QD=7.67;ReadPosRankSum=3.066;VQSLOD=1.3368;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:13,0:25:18.69:49,0,19	1/1:7,5:12:11.91:175,12,0	./.	./.	1/1:16,0:30:14.41:64,14,0	0/0:8,0:15:21.06:0,21,360	0/0:17,0:24:16.73:0,17,119	0/0:28,0:26:24.92:0,25,395	0/1:14,0:27:10.90:271,0,11	1/1:9,8:18:27:333,27,0	1/1:11,1:14:8.98:102,9,0	1/1:18,5:24:3.45:174,3,0	1/1:7,6:14:11.98:168,12,0	1/1:9,8:18:18.05:252,18,0	1/1:17,9:25:9.50:142,10,0	1/1:9,10:18:24.08:370,24,0	1/1:17,11:28:12.04:188,12,0	1/1:6,0:10:3:28,3,0	1/1:15,5:20:8.91:113,9,0	1/1:14,7:22:12.40:132,12,0	0/1:26,4:30:37.94:209,0,38	0/0:16,0:15:14.08:0,14,211	0/0:14,0:14:14.22:0,14,274	0/0:5,0:14:12.04:0,12,201	1/1:6,8:14:9.02:122,9,0	1/1:13,0:16:5.96:50,6,0	1/1:19,13:33:16:354,16,0	0/1:5,0:5:17.39:17,0,60
chr10	61869835	.	TACACAC	T	188.13	PASS	AB=0.975;AC=18;AF=0.409;AN=44;BaseQRankSum=4.986;DP=435;FS=31.103;HRun=0;HaplotypeScore=89.6206;InbreedingCoeff=0.1700;MQ=72.69;MQ0=12;MQRankSum=-0.836;QD=0.77;ReadPosRankSum=-1.231;VQSLOD=0.0299;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:26:2.49:41,2,0	./.	./.	./.	./.	0/1:14,0:14:5.51:6,0,15	1/1:19,0:22:0.67:2,1,0	0/1:18,0:18:0:0,0,0	./.	0/0:9,0:9:11.88:0,12,97	0/0:6,0:6:5.99:0,6,50	0/0:8,0:8:0:0,0,0	0/0:10,0:10:3.01:0,3,42	0/0:6,0:6:3:0,3,42	0/0:5,0:5:2.99:0,3,24	1/1:4,0:8:1.77:4,2,0	0/1:19,1:23:39.62:40,0,92	1/1:13,0:18:2.60:10,3,0	0/1:13,0:13:3.73:4,0,76	0/0:6,0:7:5.13:0,5,122	0/1:44,0:44:16.75:17,0,236	1/1:4,1:5:3.01:60,3,0	./.	1/1:26,11:37:4.87:118,5,0	0/0:6,0:6:6.01:0,6,67	0/0:12,0:11:13.29:0,13,178	0/1:15,0:15:8.64:9,0,104	0/0:11,0:13:24:0,24,295
chr10	61871175	.	C	CA	4038.34	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-11.858;DP=669;FS=12.071;HRun=8;HaplotypeScore=71.9050;InbreedingCoeff=0.9959;MQ=87.37;MQ0=0;MQRankSum=-1.952;QD=27.66;ReadPosRankSum=3.919;VQSLOD=3.4087;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,31:36:87.26:1004,87,0	0/0:11,0:11:27.01:0,27,247	0/0:25,0:25:39.70:0,40,329	0/0:23,0:23:29.98:0,30,269	1/1:3,25:28:72.13:798,72,0	0/0:27,0:27:69.01:0,69,625	0/0:21,0:20:57:0,57,512	0/0:33,0:33:81.02:0,81,737	1/1:2,25:27:60.18:692,60,0	0/0:26,0:26:60.02:0,60,549	0/0:29,0:29:56.99:0,57,522	0/0:21,0:21:63.03:0,63,577	0/0:17,0:18:47.06:0,47,418	0/0:21,0:21:57.02:0,57,517	0/0:31,0:31:90.01:0,90,814	0/0:29,0:30:74.07:0,74,665	0/0:18,0:18:48.02:0,48,439	1/1:2,24:26:69.21:796,69,0	0/0:27,1:28:28.40:0,28,515	0/0:18,0:18:42.02:0,42,384	0/0:22,0:22:53.96:0,54,479	0/0:23,0:23:63.03:0,63,576	0/0:26,0:26:60.01:0,60,545	0/0:31,0:31:87.05:0,87,796	0/0:16,0:16:45.02:0,45,412	1/1:2,17:19:14.63:402,15,0	0/0:23,0:25:55.09:0,55,479	1/1:0,10:10:30.09:346,30,0
chr10	61873184	.	AC	A	1821.13	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=7.543;DP=570;FS=1.048;HRun=6;HaplotypeScore=57.0634;InbreedingCoeff=0.9924;MQ=79.54;MQ0=0;MQRankSum=-4.411;QD=24.28;ReadPosRankSum=2.489;VQSLOD=3.4038;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,33:38:87.21:933,87,0	0/0:11,0:11:27.09:0,27,355	0/0:18,0:18:45.85:0,46,590	0/0:15,0:15:14.26:0,14,389	1/1:1,17:18:48.12:516,48,0	0/0:17,0:17:45.13:0,45,573	0/0:26,0:26:69.22:0,69,906	0/0:18,0:18:42.13:0,42,539	0/0:23,0:23:66.21:0,66,864	0/0:23,0:23:57.18:0,57,736	0/0:19,0:19:51.17:0,51,670	0/0:33,0:33:93.29:0,93,1209	0/0:18,0:18:42.13:0,42,540	0/0:16,0:16:48.16:0,48,631	0/0:15,0:15:42.12:0,42,537	0/0:16,0:16:48.16:0,48,632	0/0:12,0:12:36.12:0,36,472	1/1:2,17:19:48.12:515,48,0	0/0:18,0:18:51.14:0,51,652	0/0:18,0:18:48.12:0,48,598	0/0:31,0:31:84.26:0,84,1089	0/0:11,0:11:30.10:0,30,394	0/0:16,0:16:48.16:0,48,630	0/0:35,0:35:93.27:0,93,1202	0/0:13,0:13:39.13:0,39,509	0/0:40,0:40:99:0,105,1316	0/0:23,0:23:54.18:0,54,710	0/0:10,0:10:30.10:0,30,395
chr10	61879341	.	A	ACT	1797.14	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=11.419;DP=717;FS=0.000;HRun=0;HaplotypeScore=131.1906;InbreedingCoeff=0.8737;MQ=57.71;MQ0=4;MQRankSum=-5.525;QD=10.70;ReadPosRankSum=-1.995;VQSLOD=3.0411;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:31,0:32:25.46:25,0,248	0/0:13,0:13:39.12:0,39,555	0/0:21,0:14:38.54:0,39,457	0/0:29,0:20:15.67:0,16,407	0/0:18,0:18:24.04:0,24,304	0/0:20,0:20:57.12:0,57,755	0/0:31,0:31:90.27:0,90,1273	0/0:35,0:34:38.38:0,38,444	1/1:20,1:21:21.06:247,21,0	0/0:32,0:32:96.31:0,96,1394	0/0:15,0:15:36.10:0,36,510	0/0:24,0:24:69.22:0,69,1014	0/0:17,0:17:51.17:0,51,748	0/0:23,0:23:66.18:0,66,912	0/0:13,0:13:39.10:0,39,534	0/0:23,0:23:69.17:0,69,936	0/0:41,0:41:99:0,120,1681	0/0:18,0:18:45.06:0,45,593	0/0:29,0:29:87.28:0,87,1254	0/0:20,0:20:60.13:0,60,799	0/0:87,0:87:99:0,250,3381	1/1:17,0:16:13.65:105,14,0	1/1:16,0:16:12.03:138,12,0	1/1:31,0:30:9.20:63,9,0	0/0:23,0:23:63.20:0,63,906	1/1:36,1:37:93.04:1047,93,0	0/0:16,0:16:39.07:0,39,528	1/1:9,4:13:24.08:357,24,0
chr10	61879342	.	C	CTCTG	4025.60	PASS	AB=0.667;AC=13;AF=0.232;AN=56;BaseQRankSum=11.093;DP=744;FS=2.653;HRun=0;HaplotypeScore=159.2913;InbreedingCoeff=0.8340;MQ=56.53;MQ0=4;MQRankSum=-7.234;QD=20.97;ReadPosRankSum=-2.758;VQSLOD=3.1519;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:1.10:0,1,296	0/0:13,0:13:39.13:0,39,767	0/0:22,0:14:33.09:0,33,553	0/0:25,0:17:27.52:0,28,468	0/0:18,0:18:24.76:0,25,350	0/0:21,0:21:57.12:0,57,970	0/0:33,0:33:93.29:0,93,1718	0/1:19,0:37:99:220,0,351	1/1:4,17:24:21.07:585,21,0	0/0:32,0:32:96.32:0,96,1872	0/0:17,0:17:36.11:0,36,682	0/0:25,0:25:69.24:0,69,1374	0/0:17,0:17:51.17:0,51,1003	0/0:23,0:23:69.18:0,69,1235	0/0:13,0:13:39.10:0,39,706	0/0:24,0:24:69.17:0,69,1224	0/0:43,0:43:99:0,123,2276	0/0:18,0:18:44.08:0,44,715	0/0:29,0:29:87.28:0,87,1632	0/0:20,0:20:60.14:0,60,1055	0/0:87,0:87:99:0,250,4391	1/1:3,0:18:11.99:140,12,0	1/1:4,0:20:11.23:243,11,0	1/1:7,2:33:9.86:109,10,0	0/0:23,0:23:66.20:0,66,1237	1/1:3,36:41:99:2104,99,0	0/0:16,0:16:39.07:0,39,700	1/1:5,9:14:27.09:625,27,0
chr10	61879355	.	T	TGCGCGCGC	1184.15	PASS	AB=0.976;AC=10;AF=0.179;AN=56;BaseQRankSum=6.927;DP=685;FS=21.076;HRun=0;HaplotypeScore=212.6622;InbreedingCoeff=0.3944;MQ=57.67;MQ0=3;MQRankSum=-7.078;QD=7.13;ReadPosRankSum=0.188;VQSLOD=1.2945;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:5,22:31:6.21:251,6,0	0/0:15,0:15:42.11:0,42,1027	0/0:13,0:9:20.92:0,21,210	0/0:16,0:9:14.59:0,15,148	1/1:3,10:17:4.84:247,5,0	0/0:15,0:15:45.13:0,45,1147	0/0:33,0:33:96.27:0,96,2146	0/1:35,0:34:38.25:38,0,309	0/0:21,0:21:27.04:0,27,399	0/0:32,0:32:93.28:0,93,2285	0/0:16,0:16:39.59:0,40,1023	0/0:29,0:29:78.70:0,79,1754	0/0:19,0:19:57.17:0,57,1359	0/0:23,0:23:66.18:0,66,1682	0/0:14,0:14:36.10:0,36,879	0/0:21,0:21:63.16:0,63,1420	0/0:45,0:45:99:0,107,3391	0/1:15,2:19:76.59:522,0,77	0/0:26,0:26:75.17:0,75,1412	0/0:17,0:17:51.17:0,51,1370	0/0:69,0:69:99:0,189,3969	0/1:19,0:18:65.32:65,0,385	0/1:18,0:17:99:132,0,196	1/1:27,0:25:5.04:71,5,0	0/0:25,0:25:69.22:0,69,1770	0/0:38,0:38:96.14:0,96,1386	0/0:16,0:16:39.12:0,39,1033	0/0:16,0:16:30.06:0,30,433
chr10	61880654	.	A	ATG	3018.14	PASS	AB=0.765;AC=23;AF=0.426;AN=54;BaseQRankSum=-6.335;DP=693;FS=0.000;HRun=0;HaplotypeScore=121.6188;InbreedingCoeff=-0.3444;MQ=55.78;MQ0=9;MQRankSum=1.388;QD=6.22;ReadPosRankSum=0.747;VQSLOD=3.2811;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:42:0.09:0,0,4	1/1:1,2:4:6.02:90,6,0	./.	0/1:24,0:12:0:0,0,0	0/1:6,0:14:0:0,0,0	0/1:18,8:25:27.30:27,0,121	0/1:13,6:19:81.45:118,0,81	1/1:17,0:18:5.76:32,6,0	0/0:12,0:23:28.57:0,29,159	0/1:31,7:39:70.87:243,0,71	0/1:16,4:20:65.38:75,0,65	0/1:8,11:19:28.57:197,0,29	0/1:14,8:22:75.40:187,0,75	0/1:16,9:26:83.55:240,0,84	0/1:12,11:23:39.24:289,0,39	0/1:17,15:32:99:361,0,154	0/1:13,11:30:99:171,0,115	0/0:13,0:20:6.93:0,7,31	0/1:18,4:22:43.85:157,0,44	0/1:17,4:25:54.17:59,0,54	0/1:42,22:64:99:326,0,165	0/0:19,0:38:2.69:0,3,14	1/1:5,0:15:2.68:11,3,0	0/0:17,0:22:2.79:0,3,14	0/1:5,10:16:9.08:292,0,9	0/0:30,0:30:2.57:0,3,266	0/1:15,9:24:50.77:284,0,51	0/0:3,0:6:11.53:0,12,75
chr10	61881286	.	GA	G	1308.59	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=10.637;DP=559;FS=28.235;HRun=2;HaplotypeScore=81.9582;InbreedingCoeff=0.9878;MQ=62.97;MQ0=0;MQRankSum=-9.988;QD=30.43;ReadPosRankSum=3.557;VQSLOD=1.8833;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:17:42.14:0,42,628	0/0:10,0:10:30.10:0,30,449	0/0:15,0:15:41.99:0,42,629	0/0:15,0:14:33.10:0,33,464	0/0:21,0:21:60.20:0,60,895	0/0:15,0:15:42.14:0,42,628	0/0:18,0:18:54.18:0,54,809	0/0:26,0:25:75.25:0,75,1120	1/1:0,14:13:39.11:446,39,0	0/0:32,0:32:93.30:0,93,1349	0/0:14,0:14:42.13:0,42,608	0/0:28,0:28:84.28:0,84,1257	0/0:22,0:22:63.18:0,63,885	0/0:18,0:18:51.17:0,51,763	0/0:25,0:25:75.25:0,75,1122	0/0:24,0:24:69.19:0,69,990	0/0:32,0:32:87.21:0,87,1199	0/0:12,0:10:27.09:0,27,403	0/0:27,0:27:75.24:0,75,1085	0/0:17,0:17:51.17:0,51,760	0/0:26,0:26:78.26:0,78,1151	0/0:19,0:19:57.19:0,57,851	0/0:21,1:22:60.15:0,60,851	0/0:14,0:14:27.09:0,27,403	0/0:15,0:15:42.14:0,42,629	1/1:0,25:25:75.22:863,75,0	0/0:31,0:31:93.29:0,93,1348	1/1:0,4:4:12.04:139,12,0
chr10	61881293	.	CA	C	1447.68	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=10.971;DP=562;FS=34.129;HRun=4;HaplotypeScore=84.1980;InbreedingCoeff=0.9565;MQ=66.20;MQ0=0;MQRankSum=-8.772;QD=30.80;ReadPosRankSum=2.254;VQSLOD=1.4707;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:19:39.09:0,39,523	0/0:11,0:11:33.11:0,33,461	0/0:18,0:18:47.47:0,47,670	0/0:17,0:16:27.09:0,27,378	0/0:20,0:20:45.11:0,45,605	0/0:14,0:14:42.13:0,42,572	0/0:16,0:16:45.14:0,45,614	0/0:32,0:31:87.24:0,87,1178	1/1:0,15:14:42.13:495,42,0	0/0:29,0:29:78.25:0,78,1063	0/0:15,0:15:45.14:0,45,613	0/0:28,0:28:75.22:0,75,1016	0/0:20,0:20:60.19:0,60,825	0/0:15,0:15:42.13:0,42,571	0/0:27,0:27:78.25:0,78,1076	0/0:22,0:22:66.22:0,66,924	0/0:29,0:29:80.86:0,81,1102	0/0:11,0:9:21.06:0,21,293	0/0:26,0:26:72.24:0,72,1009	0/0:17,0:17:48.16:0,48,671	0/0:28,0:28:78.22:0,78,1070	0/0:20,0:20:45.11:0,45,606	0/0:20,3:23:9.15:0,9,507	0/0:11,0:11:12.04:0,12,166	0/0:15,0:15:42.11:0,42,568	1/1:1,27:28:81.23:949,81,0	0/0:31,0:31:93.29:0,93,1283	1/1:0,4:4:12.04:143,12,0
chr10	61881554	.	TCA	T	488.25	PASS	AB=0.931;AC=14;AF=0.318;AN=44;BaseQRankSum=3.201;DP=553;FS=0.000;HRun=0;HaplotypeScore=78.4506;InbreedingCoeff=0.3989;MQ=56.07;MQ0=11;MQRankSum=-0.592;QD=2.36;ReadPosRankSum=-0.657;VQSLOD=1.6684;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:32,3:35:24.14:129,0,24	0/0:8,0:8:2.99:0,3,23	./.	./.	1/1:12,8:20:6.02:65,6,0	0/0:11,0:11:12.04:0,12,176	0/0:20,0:20:12.01:0,12,153	./.	0/0:15,0:26:41.75:0,42,393	0/0:14,0:13:9.03:0,9,131	0/0:12,0:12:3.01:0,3,44	0/1:21,1:23:14.36:14,0,186	0/1:18,4:22:14.36:14,0,200	0/0:14,0:25:11.99:0,12,103	0/0:17,0:26:15.02:0,15,165	0/0:21,0:21:15.05:0,15,219	0/0:31,0:30:33.09:0,33,464	1/1:14,9:23:21.02:226,21,0	./.	0/0:11,0:11:3.01:0,3,38	0/1:28,0:28:7.56:8,0,219	1/1:9,0:14:2.84:14,3,0	./.	1/1:23,0:30:15.09:71,15,0	0/0:18,0:18:18.06:0,18,261	./.	0/0:20,0:20:23.52:0,24,334	1/1:4,6:9:9.02:97,9,0
chr10	61882787	.	GA	G	3983.88	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=12.626;DP=647;FS=0.669;HRun=11;HaplotypeScore=77.8222;InbreedingCoeff=0.9870;MQ=62.80;MQ0=7;MQRankSum=-0.149;QD=14.70;ReadPosRankSum=3.644;VQSLOD=4.3182;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,38:47:48.69:608,49,0	0/0:9,0:9:18.05:0,18,192	0/0:16,2:12:24.41:0,24,218	0/0:23,0:12:18.60:0,19,171	1/1:4,24:28:71.91:591,72,0	0/0:9,0:10:26.90:0,27,268	0/0:24,1:25:44.53:0,45,679	1/1:5,23:29:72.70:570,73,0	1/1:2,21:23:38.72:468,39,0	0/0:22,0:22:51.12:0,51,538	0/0:14,1:15:8.44:0,8,295	0/0:15,0:15:42.10:0,42,441	0/0:14,0:14:33.06:0,33,337	0/0:18,0:18:48.10:0,48,497	0/0:27,0:27:78.17:0,78,817	0/0:17,0:17:48.12:0,48,511	0/0:36,2:38:46.92:0,47,893	1/1:5,25:30:57.39:574,57,0	0/0:31,2:32:37.91:0,38,798	0/0:20,0:20:44.95:0,45,461	0/0:23,1:26:34.99:0,35,521	1/1:5,0:22:35.56:116,36,0	1/1:1,0:13:22.38:65,22,0	1/1:4,0:36:44.59:129,45,0	0/0:24,0:24:63.13:0,63,654	1/1:1,18:19:54.82:446,55,0	0/0:20,0:21:47.93:0,48,480	1/1:3,20:23:50.91:419,51,0
chr10	61882907	.	AGT	A	1897.60	PASS	AB=0.913;AC=23;AF=0.411;AN=56;BaseQRankSum=7.311;DP=758;FS=5.249;HRun=0;HaplotypeScore=124.0150;InbreedingCoeff=0.2048;MQ=57.02;MQ0=24;MQRankSum=0.499;QD=4.41;ReadPosRankSum=2.326;VQSLOD=2.6830;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:53:78.68:0,79,824	0/1:8,1:9:20.34:20,0,174	0/0:45,0:10:17.69:0,18,188	0/1:51,0:15:6.58:7,0,121	0/0:9,0:21:26.03:0,26,179	0/0:20,1:21:12.80:0,13,649	0/1:20,2:22:22.02:22,0,616	1/1:7,0:14:19.89:98,20,0	1/1:7,0:22:22.73:112,23,0	0/1:20,2:22:34.56:35,0,414	0/1:10,0:10:14.22:14,0,258	0/0:22,0:22:40.36:0,40,738	0/0:20,0:20:39.13:0,39,614	0/0:19,0:19:6.80:0,7,551	0/0:34,0:34:66.22:0,66,1037	0/1:14,1:16:13.35:13,0,437	0/0:31,1:31:24.87:0,25,852	0/0:22,0:30:43.53:0,44,446	0/1:22,0:16:11.26:11,0,307	0/0:28,1:28:21.84:0,22,784	0/1:76,3:79:8.72:9,0,1727	1/1:11,15:27:32.93:367,33,0	1/1:6,8:14:27.08:318,27,0	1/1:12,28:40:58.42:704,58,0	0/1:13,1:14:11.26:11,0,307	0/1:11,0:22:29.25:95,0,29	0/1:23,3:26:73.30:73,0,621	1/1:4,0:19:36.80:181,37,0
chr10	61883487	.	TAC	T	976.85	PASS	AB=0.918;AC=18;AF=0.321;AN=56;BaseQRankSum=8.849;DP=648;FS=5.130;HRun=0;HaplotypeScore=88.4116;InbreedingCoeff=0.3458;MQ=57.98;MQ0=15;MQRankSum=0.576;QD=3.49;ReadPosRankSum=1.663;VQSLOD=1.8791;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:26,19:47:44.45:423,44,0	0/0:12,0:11:11.51:0,12,111	0/1:20,0:3:0:0,0,0	0/0:30,0:7:0:0,0,0	1/1:10,8:19:20.77:211,21,0	0/0:13,0:13:20.17:0,20,290	0/0:25,1:25:11.78:0,12,554	0/0:30,0:29:20.97:0,21,232	1/1:7,0:23:19.88:99,20,0	0/0:24,1:25:0.09:0,0,369	0/1:19,0:18:9.07:9,0,251	0/0:21,0:20:29.91:0,30,414	0/1:23,1:24:24.68:25,0,383	0/0:15,0:15:27.07:0,27,387	0/0:27,0:27:48.09:0,48,696	0/1:15,1:16:9.30:9,0,294	0/0:34,0:34:61.24:0,61,866	1/1:13,7:21:23.47:228,23,0	0/1:22,0:21:2.31:2,0,250	0/0:18,0:18:27.05:0,27,343	0/0:41,1:42:11.73:0,12,556	0/0:21,0:21:38.31:0,38,500	0/1:13,3:16:42.64:43,0,240	0/0:34,0:35:47.98:0,48,733	0/0:19,0:19:35.59:0,36,486	0/1:14,0:25:34.65:55,0,35	0/1:17,2:19:30.10:30,0,380	1/1:5,0:8:2.84:14,3,0
chr10	61884767	.	TG	T	809.68	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=8.170;DP=711;FS=5.934;HRun=4;HaplotypeScore=73.4608;InbreedingCoeff=0.9994;MQ=87.96;MQ0=0;MQRankSum=-0.629;QD=25.30;ReadPosRankSum=-4.801;VQSLOD=1.1840;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,138,1913	0/0:11,0:11:33.11:0,33,462	0/0:27,0:27:70.91:0,71,978	0/0:40,0:40:72.45:0,72,1313	0/0:13,0:13:39.13:0,39,546	0/0:18,0:18:45.15:0,45,630	0/0:21,0:21:57.19:0,57,797	1/1:5,27:32:81.66:905,82,0	0/0:29,0:29:84.24:0,84,1154	0/0:25,0:25:69.23:0,69,966	0/0:22,0:22:66.22:0,66,922	0/0:28,0:28:84.28:0,84,1175	0/0:24,0:24:66.21:0,66,906	0/0:30,0:30:84.28:0,84,1176	0/0:26,0:26:78.24:0,78,1060	0/0:21,0:21:63.21:0,63,882	0/0:28,0:28:81.27:0,81,1134	0/0:24,0:24:72.20:0,72,986	0/0:22,0:22:66.20:0,66,891	0/0:23,0:23:69.23:0,69,966	0/0:59,0:59:99:0,166,2274	0/0:20,0:20:60.18:0,60,820	0/0:18,0:18:54.18:0,54,754	0/0:25,0:25:72.24:0,72,1008	0/0:21,0:21:57.18:0,57,781	0/0:23,0:23:66.21:0,66,895	0/0:21,0:21:60.20:0,60,840	0/0:11,0:11:33.09:0,33,443
chr10	61887916	.	A	ACGAGCTGCCAG	2544.99	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-0.804;DP=436;FS=5.639;HRun=0;HaplotypeScore=252.5104;InbreedingCoeff=0.8687;MQ=86.41;MQ0=0;MQRankSum=-4.914;QD=133.95;ReadPosRankSum=-2.869;VQSLOD=2.9615;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:73.91:0,74,2517	0/0:4,0:4:12.04:0,12,371	0/0:24,0:24:12.06:0,12,1852	0/0:21,0:21:13.39:0,13,1943	0/0:16,0:16:36.12:0,36,1176	0/0:5,0:5:12.93:0,13,437	0/0:24,0:24:53.21:0,53,1714	1/1:12,6:19:52.10:2640,52,0	0/0:12,0:12:27.17:0,27,1023	0/0:13,0:13:33.11:0,33,1109	0/0:8,0:8:15.16:0,15,447	0/0:15,0:15:40.95:0,41,1355	0/0:21,0:21:57.27:0,57,2097	0/0:18,0:18:45.95:0,46,1364	0/0:19,0:19:41.05:0,41,1403	0/0:15,0:15:45.15:0,45,1632	0/0:19,0:19:51.17:0,51,1628	0/0:12,0:12:33.07:0,33,1016	0/0:16,0:16:42.12:0,42,1327	0/0:6,0:6:18.06:0,18,595	0/0:25,0:25:59.37:0,59,1795	0/0:8,0:8:24.08:0,24,855	0/0:8,0:8:21.06:0,21,661	0/0:17,0:17:35.48:0,35,1226	0/0:12,0:12:27.09:0,27,916	0/0:17,0:17:44.96:0,45,1619	0/0:21,0:21:48.15:0,48,1725	0/0:9,0:9:17.84:0,18,653
chr10	61887949	.	A	ACAGGAGCCT	18565.38	PASS	AB=0.923;AC=48;AF=0.857;AN=56;BaseQRankSum=-6.957;DP=290;FS=4.731;HRun=0;HaplotypeScore=361.1272;InbreedingCoeff=-0.1860;MQ=52.49;MQ0=0;MQRankSum=-0.647;QD=64.02;ReadPosRankSum=-1.958;VQSLOD=3.8094;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:28:30.19:1454,30,0	1/1:1,0:1:3.01:111,3,0	0/1:3,1:7:16.26:456,0,16	0/1:4,0:6:17.24:352,0,17	1/1:16,0:16:22.42:1223,22,0	1/1:5,0:5:12.04:421,12,0	1/1:18,0:18:45.15:1348,45,0	1/1:8,0:8:20.28:558,20,0	1/1:5,0:5:8.82:172,9,0	1/1:9,0:9:0.45:687,0,0	1/1:7,0:7:9.34:381,9,0	1/1:11,0:11:18.95:666,19,0	1/1:14,0:14:40.27:1244,40,0	1/1:17,0:17:20.17:991,20,0	1/1:17,0:17:33.22:1336,33,0	1/1:15,0:15:13.36:1210,13,0	0/1:10,0:10:21.09:657,0,21	0/1:6,0:6:18.74:301,0,19	0/1:4,0:4:2.53:118,0,3	1/1:4,0:4:9.03:344,9,0	1/1:17,0:17:30.08:1139,30,0	1/1:5,0:5:9.03:255,9,0	1/1:6,0:6:6.49:245,6,0	0/1:11,0:11:4.49:763,0,4	1/1:10,0:10:11.61:364,12,0	1/1:9,0:9:19.61:570,20,0	0/1:18,0:18:11.13:975,0,11	0/1:6,0:6:8.98:225,0,9
chr10	61889316	.	A	AACAC	1234.09	PASS	AB=0.913;AC=34;AF=0.708;AN=48;BaseQRankSum=-2.678;DP=461;FS=4.882;HRun=0;HaplotypeScore=100.1320;InbreedingCoeff=0.3773;MQ=58.18;MQ0=14;MQRankSum=1.468;QD=4.13;ReadPosRankSum=-0.618;VQSLOD=1.8446;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:20:2.89:24,3,0	./.	./.	./.	1/1:11,0:11:6.02:77,6,0	1/1:14,0:21:2.66:12,3,0	1/1:11,0:13:2.74:12,3,0	1/1:23,0:22:0.47:1,0,0	0/0:8,0:11:5.50:0,5,37	1/1:15,0:14:13.85:164,14,0	1/1:5,5:11:3.01:70,3,0	1/1:15,0:20:3.01:52,3,0	1/1:13,0:12:6.02:100,6,0	1/1:17,0:18:15.52:266,16,0	0/1:15,1:19:39.71:64,0,40	1/1:12,0:12:5.99:48,6,0	0/0:20,0:20:1.60:0,2,14	0/0:17,0:18:5.33:0,5,55	1/1:6,0:6:3.01:38,3,0	1/1:12,0:12:2.96:19,3,0	1/1:16,4:21:3.01:70,3,0	0/0:15,0:20:3:0,3,28	0/0:7,0:12:8.96:0,9,67	0/0:19,0:19:2.50:0,2,9	1/1:19,0:19:15.04:213,15,0	0/1:20,0:20:0:0,0,0	1/1:10,6:19:7.84:140,8,0	./.
chr10	61890752	.	CTG	C	729.69	PASS	AB=0.914;AC=23;AF=0.479;AN=48;BaseQRankSum=-1.973;DP=656;FS=7.664;HRun=0;HaplotypeScore=87.2756;InbreedingCoeff=0.3563;MQ=64.21;MQ0=13;MQRankSum=0.269;QD=2.18;ReadPosRankSum=1.554;VQSLOD=1.1061;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:37:14.99:0,15,154	1/1:11,0:11:5.97:46,6,0	./.	./.	0/0:19,0:19:16.75:0,17,152	0/1:29,1:30:32.34:69,0,32	0/1:24,8:32:10.97:55,0,11	0/0:18,0:18:6.76:0,7,39	0/0:21,0:21:3.48:0,3,44	1/1:16,2:18:5.58:54,6,0	./.	1/1:11,6:18:14.79:128,15,0	1/1:18,3:21:8.53:96,9,0	1/1:11,6:17:3:32,3,0	1/1:18,7:26:11.73:110,12,0	1/1:16,2:18:3:32,3,0	1/1:27,9:36:9.02:96,9,0	0/0:22,0:20:17.32:0,17,155	1/1:14,0:14:2.99:23,3,0	0/1:25,1:27:32.07:68,0,32	0/1:46,3:48:20.67:21,0,81	0/0:23,0:23:5.97:0,6,46	0/0:22,0:21:5.99:0,6,51	0/0:28,0:29:17.48:0,17,116	./.	0/0:27,0:26:23.98:0,24,260	0/1:16,0:17:9.26:65,0,9	0/0:14,0:12:7.21:0,7,59
chr10	61890959	.	G	GCAAA	2934.76	PASS	AB=0.647;AC=5;AF=0.089;AN=56;BaseQRankSum=-9.613;DP=747;FS=1.244;HRun=0;HaplotypeScore=114.9068;InbreedingCoeff=0.8032;MQ=72.00;MQ0=0;MQRankSum=0.103;QD=34.13;ReadPosRankSum=1.111;VQSLOD=3.9395;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:14,26:42:66.23:1582,66,0	0/0:16,0:16:27.06:0,27,384	0/0:28,0:25:17.98:0,18,213	0/0:30,0:28:27.09:0,27,411	0/1:10,11:22:9.20:759,0,9	0/0:26,0:26:57.16:0,57,870	0/0:25,0:25:42.13:0,42,653	0/0:30,0:30:48.15:0,48,728	0/0:32,0:32:75.19:0,75,1158	0/0:26,0:27:57.19:0,57,897	0/0:22,0:22:51.15:0,51,772	0/0:28,0:28:57.17:0,57,863	0/0:17,0:17:33.09:0,33,477	0/0:21,0:22:39.13:0,39,607	0/0:34,0:34:63.19:0,63,954	0/0:27,0:27:57.17:0,57,871	0/0:32,0:32:63.21:0,63,1004	1/1:9,12:22:30.10:723,30,0	0/0:20,0:20:36.12:0,36,578	0/0:33,0:33:57.17:0,57,868	0/0:35,0:35:75.22:0,75,1148	0/0:41,0:41:90.29:0,90,1415	0/0:25,0:25:48.14:0,48,726	0/0:35,0:35:69.23:0,69,1077	0/0:14,0:14:33.11:0,33,531	0/0:29,0:29:57.18:0,57,876	0/0:23,0:23:36.11:0,36,552	0/0:10,0:10:27.09:0,27,435
chr10	61892344	.	AT	A	982.38	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=2.976;DP=456;FS=2.888;HRun=4;HaplotypeScore=56.3946;InbreedingCoeff=0.8193;MQ=75.65;MQ0=12;MQRankSum=1.810;QD=6.06;ReadPosRankSum=2.870;VQSLOD=0.2848;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,14:20:7.80:60,8,0	0/0:3,0:3:3:0,3,25	0/1:53,0:11:3.28:3,0,94	0/0:48,0:18:10.28:0,10,128	1/1:6,18:24:47.54:301,48,0	0/0:17,0:17:29.18:0,29,232	0/0:19,0:19:51:0,51,488	1/1:23,0:23:41.53:350,42,0	0/0:11,0:11:23.43:0,23,148	0/0:18,0:18:47.68:0,48,408	0/0:13,0:13:33.01:0,33,318	0/0:14,0:14:32.40:0,32,305	0/0:16,0:16:35.10:0,35,311	0/0:10,0:10:23.99:0,24,209	0/0:4,0:4:12.02:0,12,121	0/0:9,0:9:23.90:0,24,219	0/0:20,0:20:48.01:0,48,435	1/1:14,0:14:28.26:249,28,0	0/0:11,0:11:14.08:0,14,192	0/0:15,0:15:41.51:0,42,361	0/0:5,0:5:10.82:0,11,84	1/1:4,0:4:8.95:66,9,0	1/1:2,11:13:2.34:16,2,0	1/1:8,1:9:14.30:120,14,0	0/0:10,0:10:23.90:0,24,231	0/0:19,0:19:50.78:0,51,417	0/0:20,0:20:56.67:0,57,491	0/0:12,0:12:23.19:0,23,149
chr10	61892347	.	TTAAAAAAA	T	455.20	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=2.528;DP=500;FS=1.576;HRun=0;HaplotypeScore=109.8816;InbreedingCoeff=0.2423;MQ=73.08;MQ0=12;MQRankSum=-0.268;QD=8.59;ReadPosRankSum=0.235;VQSLOD=2.0173;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:33.11:0,33,988	0/0:6,0:6:15.05:0,15,484	0/0:59,0:12:4.49:0,4,178	0/0:49,0:16:22.59:0,23,361	0/0:26,0:26:13.61:0,14,1520	0/0:21,0:21:51.13:0,51,1530	0/0:21,0:21:63.15:0,63,1835	1/1:14,4:22:2.17:529,2,0	0/0:11,0:11:27.07:0,27,513	0/0:18,0:18:54.16:0,54,1520	0/0:14,0:14:42.10:0,42,1098	0/0:15,0:15:39.10:0,39,1238	0/0:17,0:17:48.05:0,48,1452	0/0:11,0:11:33.09:0,33,990	0/0:6,0:6:15.04:0,15,435	0/0:9,0:9:27.07:0,27,759	0/0:20,0:20:60.16:0,60,1714	0/1:17,0:17:1.05:1,0,1009	0/0:13,0:13:23.20:0,23,978	0/0:17,0:17:51.14:0,51,1633	0/0:6,0:6:16.28:0,16,439	0/1:4,0:4:12.65:13,0,126	0/0:14,0:14:12.02:0,12,367	0/1:9,0:10:1.26:1,0,403	0/0:13,0:13:39.13:0,39,1436	0/0:20,0:20:57.08:0,57,1075	0/0:22,0:21:63.19:0,63,2147	0/0:15,0:15:30.10:0,30,736
chr10	61893327	.	AGAG	A	555.42	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=4.609;DP=550;FS=0.858;HRun=0;HaplotypeScore=85.2968;InbreedingCoeff=0.5616;MQ=55.69;MQ0=32;MQRankSum=-1.415;QD=6.17;ReadPosRankSum=-0.267;VQSLOD=2.3830;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:36:36.90:0,37,369	0/1:7,0:7:4.30:4,0,181	0/0:47,0:11:9:0,9,126	0/0:66,0:23:13.71:0,14,227	0/0:11,0:11:14.37:0,14,187	0/0:13,0:12:27.07:0,27,466	0/1:18,0:17:2.83:3,0,404	0/0:27,0:23:41.58:0,42,501	0/0:11,0:10:9.02:0,9,128	0/0:20,0:17:30.09:0,30,515	0/0:13,0:12:22.86:0,23,311	0/0:12,0:12:27.08:0,27,415	0/0:10,0:10:12.04:0,12,193	0/0:12,0:11:21.07:0,21,387	0/0:8,0:8:15:0,15,212	0/0:12,0:12:14.24:0,14,332	0/0:21,0:20:35.98:0,36,449	0/1:20,0:18:18.22:21,0,18	0/0:21,0:14:30.06:0,30,410	0/0:24,0:24:54.10:0,54,798	0/0:39,0:35:60.06:0,60,948	1/1:7,6:13:33.05:414,33,0	1/1:7,0:7:12.04:166,12,0	1/1:23,2:23:6.91:89,7,0	0/0:18,0:16:36.11:0,36,593	0/0:16,0:14:24.07:0,24,384	0/0:18,0:18:35.70:0,36,550	0/0:4,0:4:5.50:0,5,101
chr10	61893342	.	GGAGGAA	G	722.11	PASS	AB=0.983;AC=11;AF=0.196;AN=56;BaseQRankSum=6.010;DP=485;FS=16.863;HRun=0;HaplotypeScore=91.9605;InbreedingCoeff=0.4330;MQ=47.02;MQ0=66;MQRankSum=-2.546;QD=5.47;ReadPosRankSum=0.562;VQSLOD=0.1825;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:32,0:30:99:127,0,209	0/0:7,0:7:14.70:0,15,317	0/0:25,0:3:9:0,9,182	0/0:36,0:11:15.92:0,16,364	0/1:10,0:10:34.35:34,0,93	0/0:14,0:12:27.08:0,27,769	0/1:20,0:14:12.70:13,0,720	0/0:24,0:16:44.59:0,45,846	0/0:10,0:9:7.30:0,7,214	0/0:20,0:13:39.02:0,39,936	0/0:12,0:9:24.05:0,24,502	0/0:14,0:12:32.76:0,33,667	0/0:8,0:7:18.05:0,18,363	0/0:14,0:10:26.75:0,27,679	0/0:9,0:7:18.04:0,18,315	0/1:10,1:9:32.57:33,0,534	0/0:19,0:15:45.12:0,45,865	0/1:14,0:11:1.15:86,0,1	0/0:27,0:17:48.03:0,48,816	0/0:22,0:21:57.15:0,57,1381	0/0:40,0:34:77.91:0,78,1763	1/1:16,0:15:30.94:403,31,0	1/1:4,2:5:11.94:161,12,0	1/1:9,13:19:6.96:24,7,0	0/0:17,0:14:42.12:0,42,979	0/0:15,0:10:27.08:0,27,634	0/0:16,0:14:38.34:0,38,893	0/0:4,0:3:8.86:0,9,169
chr10	61893366	.	GGAGGAGGAGGAA	G	534.86	PASS	AB=1.000;AC=7;AF=0.130;AN=54;BaseQRankSum=2.474;DP=461;FS=5.052;HRun=0;HaplotypeScore=132.5087;InbreedingCoeff=0.6013;MQ=44.05;MQ0=77;MQRankSum=-0.077;QD=8.23;ReadPosRankSum=-1.575;VQSLOD=1.6473;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:26:1.79:0,2,260	0/0:8,0:8:11.96:0,12,156	./.	0/0:4,0:1:2.96:0,3,19	0/0:12,0:11:14.82:0,15,194	0/0:21,0:16:33.10:0,33,1032	0/0:25,0:17:32.96:0,33,852	0/0:22,0:10:3:0,3,208	0/0:10,0:10:5.44:0,5,29	0/0:21,0:12:35.97:0,36,997	0/0:11,0:8:21:0,21,462	0/0:16,0:14:36.50:0,37,819	0/0:11,0:10:18.05:0,18,545	0/0:17,0:12:17.09:0,17,745	0/1:12,0:9:5.79:6,0,361	0/0:15,0:13:32.82:0,33,783	0/0:19,0:14:36.10:0,36,1097	0/0:12,0:9:4.54:0,5,93	0/0:26,0:20:47.81:0,48,944	0/0:16,0:14:32.86:0,33,844	0/0:53,0:43:99:0,99,2827	1/1:6,10:15:21.97:234,22,0	1/1:11,1:11:21.48:254,21,0	1/1:25,0:17:20.48:181,20,0	0/0:18,0:13:29.68:0,30,1023	0/0:14,0:8:8.84:0,9,242	0/0:10,0:8:14.96:0,15,388	0/0:3,0:2:2.99:0,3,24
chr10	61893375	.	GGAA	G	715.79	PASS	AB=0.940;AC=11;AF=0.196;AN=56;BaseQRankSum=3.748;DP=495;FS=10.820;HRun=0;HaplotypeScore=78.8348;InbreedingCoeff=0.3665;MQ=46.53;MQ0=74;MQRankSum=1.547;QD=6.39;ReadPosRankSum=-3.841;VQSLOD=-0.6343;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,1:27:6.80:0,7,266	0/0:7,0:7:11.93:0,12,93	0/0:5,0:2:2.85:0,3,15	0/0:6,0:4:3.84:0,4,21	0/0:14,0:13:14.82:0,15,148	0/0:26,0:21:47:0,47,520	0/0:25,0:17:43.72:0,44,527	0/0:24,0:11:29.77:0,30,237	1/1:10,0:10:15.32:117,15,0	0/0:23,0:14:39.01:0,39,551	0/0:14,0:12:29.81:0,30,350	0/0:15,0:13:35.40:0,35,369	0/0:10,0:9:18.04:0,18,294	0/0:15,0:10:16.37:0,16,360	0/1:9,0:8:2.93:3,0,190	0/0:17,0:15:22.17:0,22,428	0/0:20,0:15:41.02:0,41,564	0/1:11,0:8:12.17:12,0,46	0/0:29,0:22:62.07:0,62,619	0/0:17,0:15:35.98:0,36,455	0/0:52,0:42:98.80:0,99,1386	0/1:23,0:22:7.05:195,0,7	1/1:17,0:16:5.33:228,5,0	0/1:24,0:16:42.86:125,0,43	0/0:22,0:17:44.67:0,45,570	0/1:8,6:9:70.51:111,0,71	0/0:12,0:10:22.01:0,22,245	1/1:4,0:3:8.99:75,9,0
chr10	61893387	.	GGAGGAAGAGGAA	G	1056.92	PASS	AB=1.000;AC=6;AF=0.107;AN=56;BaseQRankSum=4.849;DP=529;FS=2.271;HRun=0;HaplotypeScore=157.8965;InbreedingCoeff=0.4709;MQ=52.87;MQ0=64;MQRankSum=0.142;QD=13.38;ReadPosRankSum=-3.977;VQSLOD=1.2819;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:28:0.02:587,0,0	0/0:7,0:7:20.86:0,21,470	0/0:14,0:6:15.52:0,16,277	0/0:16,0:8:9.69:0,10,172	1/1:5,19:23:21.17:135,21,0	0/0:24,0:20:51.11:0,51,1850	0/0:24,0:19:50.92:0,51,1511	0/0:22,0:12:35.95:0,36,843	0/0:8,0:8:18.06:0,18,402	0/0:26,0:19:42.57:0,43,1398	0/0:16,0:14:32.93:0,33,1036	0/0:15,0:13:29.99:0,30,1050	0/0:13,0:12:24.08:0,24,975	0/0:13,0:9:27.09:0,27,1125	0/0:8,0:7:17.99:0,18,654	0/0:17,0:15:36.05:0,36,1290	0/0:23,0:19:53.99:0,54,1774	0/1:13,0:11:99:432,0,119	0/0:28,0:19:50.92:0,51,1474	0/0:15,0:14:39.08:0,39,1312	0/0:57,0:49:99:0,121,4589	0/0:27,0:26:34.14:0,34,600	0/0:16,0:15:33.04:0,33,496	0/0:21,0:15:30.36:0,30,413	0/0:21,0:17:44.82:0,45,1691	0/1:13,0:10:25.01:25,0,448	0/0:11,0:9:18.05:0,18,507	0/0:8,0:7:18.53:0,19,336
chr10	61895237	.	AT	A	4891.66	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=13.718;DP=582;FS=2.931;HRun=8;HaplotypeScore=62.0366;InbreedingCoeff=0.9813;MQ=74.10;MQ0=0;MQRankSum=0.870;QD=21.84;ReadPosRankSum=2.817;VQSLOD=5.3721;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,41:47:95.98:903,96,0	0/0:2,0:2:6.01:0,6,63	0/0:13,0:13:23.62:0,24,198	0/0:14,0:12:14.60:0,15,119	1/1:3,18:21:47.99:451,48,0	0/0:17,0:17:39.12:0,39,471	0/0:23,0:23:57.12:0,57,632	1/1:5,25:30:71.98:668,72,0	1/1:1,10:11:27.04:261,27,0	0/0:24,0:24:72.21:0,72,853	0/0:28,0:28:78.20:0,78,898	0/0:11,0:11:33.10:0,33,399	0/0:19,0:19:54.15:0,54,630	0/0:18,0:18:45.09:0,45,517	0/0:17,0:17:48.15:0,48,579	0/0:15,0:15:42.13:0,42,507	0/0:18,0:18:38.09:0,38,488	1/1:1,18:19:48.07:463,48,0	0/0:31,0:31:81.20:0,81,930	0/0:28,0:28:78.20:0,78,899	0/0:21,0:21:54.14:0,54,628	1/1:1,14:15:38.90:361,39,0	1/1:1,20:21:47.94:463,48,0	1/1:0,15:15:33.05:319,33,0	0/0:20,0:20:54.17:0,54,652	1/1:5,23:28:45.60:626,46,0	0/0:39,0:39:99:0,114,1344	1/1:4,13:17:39.06:376,39,0
chr10	61896519	.	CTG	C	577.54	PASS	AB=0.968;AC=24;AF=0.522;AN=46;BaseQRankSum=2.455;DP=617;FS=26.782;HRun=0;HaplotypeScore=98.2165;InbreedingCoeff=-0.0771;MQ=62.55;MQ0=29;MQRankSum=2.244;QD=1.41;ReadPosRankSum=2.014;VQSLOD=0.2594;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:27:0:0,0,0	./.	./.	./.	./.	1/1:13,0:12:1.55:4,2,0	0/0:16,0:16:9.03:0,9,126	0/0:32,0:26:0.89:0,1,2	1/1:12,1:11:3.01:32,3,0	0/0:18,0:17:8.87:0,9,80	0/0:10,0:9:3.01:0,3,41	0/1:30,1:28:11.73:12,0,155	0/1:18,0:17:26.01:26,0,79	0/1:26,0:25:20.03:20,0,127	0/1:25,1:26:10.76:11,0,209	0/1:13,1:14:19.77:20,0,117	1/1:27,2:28:14.90:118,15,0	0/1:19,0:16:13.59:16,0,14	./.	0/0:14,0:14:5.34:0,5,22	0/1:75,1:66:47.21:47,0,65	1/1:11,2:11:3.01:32,3,0	1/1:10,2:11:3.01:32,3,0	1/1:30,10:38:21.05:223,21,0	0/0:16,0:14:2.96:0,3,19	0/1:17,1:17:39.48:39,0,49	0/1:13,2:15:25.80:26,0,38	1/1:15,1:15:0.95:55,1,0
chr10	61896571	.	GTC	G	174.73	PASS	AB=0.995;AC=14;AF=0.269;AN=52;BaseQRankSum=6.010;DP=908;FS=35.881;HRun=0;HaplotypeScore=115.8546;InbreedingCoeff=-0.2124;MQ=34.02;MQ0=186;MQRankSum=1.139;QD=0.39;ReadPosRankSum=0.421;VQSLOD=0.1687;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,4:24:14.57:0,15,98	0/0:11,0:8:7.98:0,8,99	./.	./.	0/0:27,9:23:1.25:0,1,3	0/1:36,0:28:0.99:1,0,180	0/0:49,0:29:17.19:0,17,257	0/0:48,0:17:47.24:0,47,310	0/0:39,0:24:11.04:0,11,139	0/0:44,0:19:23.89:0,24,256	0/0:17,0:12:8.91:0,9,62	0/1:28,0:20:27.53:28,0,172	0/1:36,0:22:25.87:26,0,164	0/1:33,0:26:38.34:38,0,271	0/0:41,0:31:20.18:0,20,327	0/0:21,0:18:3.73:0,4,184	0/1:34,0:28:28.64:29,0,216	0/1:27,2:17:41.10:45,0,41	0/0:28,0:17:5.44:0,5,264	0/1:18,0:15:14.47:14,0,35	0/1:108,0:84:7:7,0,454	1/1:20,0:15:2.22:7,2,0	0/1:20,0:12:1.63:2,0,16	0/1:44,0:30:21.03:28,0,21	0/1:26,0:19:8.17:8,0,36	0/0:55,0:43:70.52:0,71,696	0/0:26,0:21:21.55:0,22,175	0/1:19,0:11:41.59:77,0,42
chr10	61896579	.	C	CTG	368.58	PASS	AB=0.931;AC=10;AF=0.200;AN=50;BaseQRankSum=4.894;DP=973;FS=0.000;HRun=0;HaplotypeScore=129.6220;InbreedingCoeff=0.0754;MQ=33.84;MQ0=204;MQRankSum=0.255;QD=1.35;ReadPosRankSum=0.578;VQSLOD=2.1783;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:31,10:23:22.42:183,0,22	0/0:14,0:9:13.63:0,14,187	./.	./.	1/1:30,5:22:2.60:10,3,0	0/0:38,0:29:35.62:0,36,432	0/0:50,1:30:27:0,27,324	0/0:57,0:21:37.87:0,38,471	0/0:40,0:25:25.53:0,26,264	0/0:54,0:23:37.71:0,38,462	0/0:18,0:14:12.04:0,12,144	0/0:34,0:22:16.23:0,16,192	0/1:38,0:25:25.15:25,0,259	0/0:33,1:28:4.85:0,5,364	0/0:40,0:30:32.72:0,33,406	0/1:23,0:20:16.44:16,0,181	0/0:33,0:27:45.07:0,45,525	0/1:28,5:21:32.39:153,0,32	0/0:35,0:21:12.01:0,12,412	0/0:19,0:16:9.03:0,9,112	0/0:102,0:78:78.18:0,78,949	./.	1/1:19,5:16:3.01:49,3,0	0/1:47,5:35:40.55:41,0,65	0/1:26,0:19:24.80:25,0,67	0/0:55,0:42:66.89:0,67,1086	0/0:26,0:20:26.72:0,27,293	0/0:20,0:11:7.51:0,8,110
chr10	61896631	.	C	CTGTGTG	858.28	PASS	AC=4;AF=0.077;AN=52;BaseQRankSum=4.017;DP=1078;FS=14.329;HRun=0;HaplotypeScore=156.7907;InbreedingCoeff=0.8118;MQ=37.42;MQ0=154;MQRankSum=-7.146;QD=10.47;ReadPosRankSum=-1.544;VQSLOD=1.6237;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:26:27.05:0,27,590	0/0:9,0:8:11.15:0,11,226	./.	./.	0/0:27,0:18:15.02:0,15,265	0/0:40,0:36:66.12:0,66,1248	0/0:61,0:47:81.46:0,81,1263	0/0:69,0:28:65.89:0,66,784	1/1:22,14:27:8.98:144,9,0	0/0:57,0:32:71.66:0,72,1016	0/0:14,0:11:20.14:0,20,244	0/0:46,0:36:71.43:0,71,1198	0/0:36,0:32:67.54:0,68,1153	0/0:38,0:31:51.10:0,51,961	0/0:46,0:35:60.14:0,60,1168	0/0:29,0:22:37.85:0,38,545	0/0:37,0:33:69.12:0,69,1190	0/0:42,0:29:19.72:0,20,702	0/0:43,0:15:26.88:0,27,313	0/0:20,0:17:23.93:0,24,418	0/0:116,0:81:99:0,106,2056	0/0:26,0:24:5.61:0,6,67	0/0:30,0:23:14.75:0,15,177	0/0:70,0:46:17.89:0,18,297	0/0:22,0:20:32.89:0,33,428	1/1:40,2:25:51.12:827,51,0	0/0:40,0:32:67.03:0,67,1224	0/0:10,4:8:2.04:0,2,6
chr10	61896663	.	GTGTC	G	163.36	PASS	AB=0.986;AC=7;AF=0.135;AN=52;BaseQRankSum=5.476;DP=1102;FS=1.647;HRun=0;HaplotypeScore=144.4250;InbreedingCoeff=0.0727;MQ=38.21;MQ0=133;MQRankSum=-2.789;QD=0.59;ReadPosRankSum=-4.941;VQSLOD=1.1717;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:22:2.43:0,2,22	0/0:7,0:6:1.68:0,2,5	./.	./.	0/0:18,0:15:8.60:0,9,127	0/0:38,0:35:68.85:0,69,1323	0/0:69,0:53:99:0,105,1848	0/1:68,0:15:22.66:23,0,130	0/1:34,1:23:45.30:82,0,45	0/0:45,0:29:62.42:0,62,1165	0/0:17,0:13:4.07:0,4,342	0/0:57,1:46:99:0,109,2289	0/0:45,1:42:97.47:0,97,1965	0/0:44,0:36:64.08:0,64,1353	0/0:37,0:28:57.14:0,57,1184	0/0:38,0:28:41.98:0,42,1012	0/0:41,0:36:83.77:0,84,1552	0/1:47,0:35:29.22:29,0,558	0/0:47,0:14:38.72:0,39,519	0/0:16,0:14:21.53:0,22,419	0/0:160,0:111:99:0,153,2952	0/0:24,0:23:3.01:0,3,37	0/0:24,0:22:6.02:0,6,103	0/1:67,3:48:41.31:41,0,97	0/0:31,0:26:48.13:0,48,905	0/1:44,0:22:80.53:81,0,361	0/0:30,0:24:62.99:0,63,1235	1/1:11,0:7:7.11:33,7,0
chr10	61896665	.	GTC	G	392.07	PASS	AB=0.983;AC=12;AF=0.231;AN=52;BaseQRankSum=8.350;DP=1099;FS=1.199;HRun=0;HaplotypeScore=122.6615;InbreedingCoeff=0.2229;MQ=38.19;MQ0=134;MQRankSum=-4.705;QD=1.25;ReadPosRankSum=-4.774;VQSLOD=0.5961;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,2:23:1.81:0,2,20	1/1:5,1:5:0.47:2,0,0	./.	./.	0/1:17,0:14:21.25:21,0,128	0/0:38,0:35:72.06:0,72,1172	0/0:67,1:52:99:0,103,1686	1/1:67,0:14:15.73:152,16,0	0/1:31,3:23:5.42:102,0,5	0/0:46,0:30:47.37:0,47,1047	0/1:18,0:14:9.91:10,0,289	0/0:57,2:47:99:0,111,1874	0/0:46,0:42:68.45:0,68,1529	0/0:41,2:36:41.87:0,42,1038	0/0:36,1:28:57.14:0,57,1048	0/0:34,3:27:8.46:0,8,783	0/0:39,0:35:50.13:0,50,1253	0/1:47,0:35:82.14:82,0,446	0/0:49,0:14:38.83:0,39,474	0/0:17,0:15:21.53:0,22,360	0/0:160,2:108:99:0,157,2471	0/0:24,0:23:3.01:0,3,37	0/0:24,0:22:6.02:0,6,115	0/1:67,0:45:38.51:39,0,65	0/0:31,0:26:39.06:0,39,775	0/1:45,1:23:89.13:89,0,315	0/0:29,1:24:55.91:0,56,1055	1/1:11,0:7:8.30:40,8,0
chr10	61896699	.	C	CTG	324.51	PASS	AB=0.947;AC=7;AF=0.135;AN=52;BaseQRankSum=5.768;DP=1083;FS=30.605;HRun=0;HaplotypeScore=134.4965;InbreedingCoeff=0.4468;MQ=39.60;MQ0=146;MQRankSum=-0.655;QD=2.03;ReadPosRankSum=-4.039;VQSLOD=-0.2846;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:33:29.75:0,30,364	0/1:9,0:7:5.96:6,0,66	./.	./.	0/0:8,0:8:12.04:0,12,158	0/0:32,0:27:61.44:0,61,808	0/0:57,0:43:84.49:0,84,1110	0/0:83,0:3:3.01:0,3,41	0/0:30,0:24:18.58:0,19,434	0/0:51,0:35:84.08:0,84,1081	0/0:18,0:15:21.07:0,21,287	0/0:49,0:42:99:0,101,1337	0/0:41,0:39:89.74:0,90,1204	0/0:49,0:43:70.09:0,70,904	0/0:39,0:32:72.24:0,72,970	0/0:38,0:30:57.11:0,57,748	0/0:41,0:37:93.16:0,93,1203	0/0:43,0:29:54.60:0,55,698	0/1:47,0:10:6.65:7,0,272	0/0:19,0:14:18.06:0,18,247	0/0:171,0:106:99:0,183,2437	1/1:27,2:25:17.91:215,18,0	1/1:11,0:12:6.02:93,6,0	0/1:51,12:44:67.61:129,0,68	0/0:18,0:16:26.58:0,27,323	0/0:52,0:28:58.63:0,59,734	0/0:21,1:16:32.86:0,33,447	0/0:10,0:9:15.52:0,16,207
chr10	61896705	.	CTGTGTG	C	536.64	PASS	AB=0.918;AC=5;AF=0.096;AN=52;BaseQRankSum=2.109;DP=1059;FS=6.987;HRun=0;HaplotypeScore=172.2490;InbreedingCoeff=0.6246;MQ=40.33;MQ0=148;MQRankSum=1.047;QD=5.59;ReadPosRankSum=-2.210;VQSLOD=1.4626;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:31:17.05:0,17,550	0/0:9,0:7:8.03:0,8,121	./.	./.	0/0:9,0:9:12.02:0,12,201	0/0:30,0:25:57.19:0,57,1247	0/0:55,0:44:90.45:0,90,1697	0/0:89,0:1:3.01:0,3,44	0/0:29,0:24:38.06:0,38,523	0/0:51,0:37:99:0,101,1893	0/0:19,0:16:24.07:0,24,455	0/0:47,0:43:99:0,108,2237	0/0:40,0:38:95.13:0,95,1951	0/0:42,0:39:63.28:0,63,1528	0/0:37,0:31:72.19:0,72,1557	0/0:34,0:28:60.30:0,60,1201	0/0:38,0:35:89.08:0,89,1892	0/0:42,0:27:42.27:0,42,834	0/0:44,0:10:22.23:0,22,375	0/0:17,0:13:18.04:0,18,385	0/0:170,0:112:99:0,193,4087	1/1:22,6:24:17.29:300,17,0	1/1:7,5:12:6.02:125,6,0	0/1:51,5:38:52.73:229,0,53	0/0:15,0:13:20.96:0,21,509	0/0:54,0:30:74.14:0,74,1061	0/0:22,0:16:33.08:0,33,627	0/0:10,0:9:20.85:0,21,307
chr10	61896762	.	ATGTCTGTG	A	1242.90	PASS	AC=10;AF=0.185;AN=54;BaseQRankSum=1.143;DP=865;FS=18.408;HRun=0;HaplotypeScore=213.6943;InbreedingCoeff=0.8804;MQ=56.29;MQ0=30;MQRankSum=-0.080;QD=12.07;ReadPosRankSum=1.873;VQSLOD=1.1980;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:21:20.78:434,21,0	0/0:11,0:11:22.29:0,22,438	0/0:45,0:18:9.64:0,10,69	0/0:59,0:23:7.95:0,8,100	./.	0/0:23,0:21:36.12:0,36,852	0/0:41,0:40:66.21:0,66,1321	0/0:50,0:47:60.18:0,60,1026	0/0:36,0:33:37.22:0,37,944	0/0:35,0:34:72.25:0,72,1498	0/0:11,0:11:18.06:0,18,337	0/0:39,0:34:69.24:0,69,1887	0/0:34,0:34:72.63:0,73,1915	0/0:37,0:34:60.21:0,60,1599	0/0:35,0:31:60.19:0,60,1436	0/0:22,0:21:24.04:0,24,560	0/0:42,0:41:87.21:0,87,2006	1/1:17,2:16:18.02:329,18,0	0/0:29,0:19:18:0,18,327	0/0:16,0:16:33.05:0,33,633	0/0:103,0:91:99:0,153,3708	1/1:19,2:21:21.05:361,21,0	1/1:9,1:10:3.01:76,3,0	1/1:28,3:27:8.53:202,9,0	0/0:14,0:13:21.07:0,21,479	0/0:36,0:35:69.05:0,69,1339	0/0:18,0:17:36.10:0,36,880	0/0:5,0:5:6.02:0,6,132
chr10	61897046	.	CTGTGTA	C	2154.37	PASS	AB=0.962;AC=4;AF=0.071;AN=56;BaseQRankSum=3.795;DP=959;FS=1.686;HRun=0;HaplotypeScore=276.1376;InbreedingCoeff=0.5625;MQ=49.88;MQ0=20;MQRankSum=-5.888;QD=28.35;ReadPosRankSum=-3.923;VQSLOD=2.4134;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:68,0:66:99:0,104,2921	0/0:8,0:8:14.17:0,14,262	0/0:57,0:14:35.70:0,36,751	0/0:55,0:26:50.80:0,51,1310	0/0:25,0:22:42.10:0,42,926	0/0:22,0:22:15.20:0,15,462	0/0:41,0:41:84.55:0,85,1966	0/0:33,0:29:45.08:0,45,768	1/1:35,12:46:86.71:1310,87,0	0/0:42,0:39:96.31:0,96,2314	0/0:14,0:13:27.08:0,27,432	0/0:46,0:44:93.94:0,94,2101	0/0:24,0:24:50.92:0,51,1138	0/0:41,0:39:91.62:0,92,2116	0/0:34,0:31:69.35:0,69,1486	0/0:34,0:34:64.32:0,64,1529	0/0:33,0:32:58.70:0,59,1577	0/0:36,0:34:78.21:0,78,1761	0/0:19,0:19:32.94:0,33,818	0/0:29,0:26:49.98:0,50,1167	0/0:76,0:73:99:0,134,3144	0/0:17,0:16:23.11:0,23,439	0/0:18,0:18:32.12:0,32,594	0/0:63,0:60:99:0,126,3082	0/0:25,0:25:30.06:0,30,766	0/1:22,2:22:99:830,0,103	0/0:23,0:22:33.07:0,33,765	0/1:5,0:5:3.51:130,0,4
chr10	61897056	.	GTA	G	474.81	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=8.936;DP=953;FS=43.966;HRun=0;HaplotypeScore=240.7597;InbreedingCoeff=0.1630;MQ=47.41;MQ0=18;MQRankSum=-3.411;QD=3.47;ReadPosRankSum=-5.271;VQSLOD=-0.2062;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:64,0:62:78.65:0,79,2129	0/1:8,0:8:12.16:12,0,267	0/0:44,0:12:33.11:0,33,620	0/0:40,0:19:51.08:0,51,943	0/0:23,0:20:39.29:0,39,653	0/0:19,0:19:12.15:0,12,395	0/0:46,0:46:20.76:0,21,1424	0/0:41,0:32:54.61:0,55,780	1/1:48,0:48:28.40:265,28,0	0/0:42,0:37:82.59:0,83,1606	0/0:14,0:13:23.98:0,24,389	0/0:46,0:45:57.57:0,58,1545	0/0:26,0:25:27.08:0,27,799	0/0:40,1:39:52.40:0,52,1448	0/0:32,0:31:32.91:0,33,1009	0/1:33,0:33:73.51:74,0,975	0/0:39,1:39:27.58:0,28,1103	0/0:37,0:35:62.85:0,63,1246	0/0:19,0:16:32.06:0,32,666	0/0:31,0:28:28.47:0,28,889	0/0:81,1:79:55.85:0,56,2227	0/1:21,0:20:28.18:28,0,353	0/0:15,0:15:30.86:0,31,470	0/0:71,0:68:32.09:0,32,2238	0/0:20,1:21:30.08:0,30,561	0/1:22,0:20:99:182,0,118	0/0:20,1:20:2.70:0,3,538	0/1:4,0:4:20.25:49,0,20
chr10	61897057	.	TATGTTTGTG	T	1277.20	PASS	AB=0.887;AC=4;AF=0.071;AN=56;BaseQRankSum=5.806;DP=946;FS=9.164;HRun=0;HaplotypeScore=322.9478;InbreedingCoeff=0.5013;MQ=47.43;MQ0=18;MQRankSum=-2.467;QD=16.81;ReadPosRankSum=0.301;VQSLOD=0.9609;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:63,0:61:99:0,140,3695	0/0:8,0:8:20.56:0,21,444	0/0:41,0:11:33.11:0,33,812	0/0:39,0:19:53.40:0,53,1272	0/0:24,0:21:45.93:0,46,1123	0/0:18,0:18:22.52:0,23,588	0/0:46,0:46:99:0,104,2522	0/0:37,0:28:63.21:0,63,1444	1/1:34,10:47:49.79:754,50,0	0/0:43,0:38:99:0,108,2987	0/0:14,0:13:27.56:0,28,565	0/0:45,0:44:99:0,100,2345	0/0:25,0:24:49.52:0,50,1246	0/0:41,0:39:99:0,100,2413	0/0:30,0:30:70.16:0,70,1774	0/0:33,0:33:82.75:0,83,1930	0/0:42,0:41:99:0,109,2266	0/0:36,0:35:85.25:0,85,2244	0/0:19,0:16:48.14:0,48,1245	0/0:33,0:30:61.37:0,61,1481	0/0:81,0:78:99:0,152,3753	0/0:21,0:20:31.33:0,31,632	0/0:14,0:14:36.12:0,36,849	0/0:70,0:68:99:0,153,4754	0/0:20,0:21:30.99:0,31,844	0/1:17,6:22:99:584,0,106	0/0:21,0:20:35.78:0,36,1015	0/1:4,0:4:9.04:54,0,9
chr10	61897062	.	TTG	T	1408.10	PASS	AB=0.904;AC=11;AF=0.212;AN=52;BaseQRankSum=1.267;DP=963;FS=7.646;HRun=0;HaplotypeScore=244.5764;InbreedingCoeff=0.4854;MQ=45.99;MQ0=20;MQRankSum=1.257;QD=6.40;ReadPosRankSum=0.616;VQSLOD=1.7609;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:41,16:62:74.24:743,74,0	0/0:4,0:9:6:0,6,53	./.	./.	1/1:17,8:22:18.03:196,18,0	0/0:9,0:21:8.53:0,9,76	0/0:45,0:48:11.70:0,12,282	0/0:37,0:30:32.72:0,33,240	1/1:39,0:47:20.72:107,21,0	0/0:38,0:35:50.50:0,51,403	0/0:12,0:15:5.37:0,5,34	0/0:33,0:44:8.22:0,8,103	0/0:15,0:27:4.60:0,5,46	0/0:39,0:40:34.64:0,35,314	0/0:20,0:27:10.89:0,11,112	0/0:26,0:31:6.40:0,6,206	0/0:36,0:42:43.15:0,43,360	0/1:22,13:35:12.99:380,0,13	0/0:20,0:16:22.78:0,23,171	0/0:22,0:33:6.52:0,7,95	0/0:82,0:84:38.27:0,38,376	0/1:19,0:20:7.63:8,0,21	0/0:11,0:14:14.94:0,15,133	0/0:59,1:70:15.37:0,15,698	0/0:14,0:21:3:0,3,25	1/1:19,0:20:21.81:123,22,0	0/0:9,0:22:0.76:0,1,77	0/1:3,0:3:10.26:10,0,28
chr10	61898277	.	CAGAG	C	727.33	PASS	AB=0.810;AC=23;AF=0.523;AN=44;BaseQRankSum=4.625;DP=510;FS=17.284;HRun=0;HaplotypeScore=83.2485;InbreedingCoeff=0.4894;MQ=58.02;MQ0=12;MQRankSum=-0.671;QD=3.34;ReadPosRankSum=-1.290;VQSLOD=0.3962;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:24.08:0,24,442	0/0:6,0:6:9.01:0,9,128	./.	0/0:19,0:5:0:0,0,0	0/0:24,0:22:6.02:0,6,112	1/1:16,0:17:6.01:69,6,0	1/1:17,1:19:3.01:46,3,0	0/0:22,0:21:0:0,0,0	0/0:10,0:12:5.74:0,6,37	0/0:30,0:30:7.22:0,7,49	./.	1/1:13,0:13:3.01:46,3,0	1/1:17,4:21:2.84:46,3,0	1/1:2,4:6:3.01:46,3,0	1/1:11,0:11:6.02:87,6,0	1/1:13,3:16:9.02:120,9,0	1/1:17,11:28:6.02:92,6,0	0/0:22,0:22:17.25:0,17,559	./.	0/0:17,0:17:3.01:0,3,43	1/1:16,0:16:3.01:46,3,0	./.	0/0:20,0:19:6.02:0,6,83	0/1:26,2:32:55.64:97,0,56	./.	1/1:15,0:19:9.90:86,10,0	1/1:7,7:13:6.02:92,6,0	./.
chr10	61902213	.	GAAA	G	4246.21	PASS	AB=0.587;AC=14;AF=0.250;AN=56;BaseQRankSum=4.732;DP=575;FS=2.940;HRun=12;HaplotypeScore=98.2608;InbreedingCoeff=0.8416;MQ=68.77;MQ0=1;MQRankSum=-4.076;QD=23.72;ReadPosRankSum=5.460;VQSLOD=3.9815;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,38:41:96.26:1213,96,0	0/0:3,0:3:9.03:0,9,171	0/0:13,0:11:17.29:0,17,204	0/0:19,0:18:30.21:0,30,461	1/1:4,9:13:27.05:340,27,0	0/0:17,0:18:51.14:0,51,915	0/0:21,0:21:60.21:0,60,1144	0/0:2,1:34:10.78:0,11,98	0/0:4,0:27:29.12:0,29,75	0/0:22,0:23:51.17:0,51,937	0/0:18,0:20:57.18:0,57,1033	0/0:13,0:15:42.10:0,42,721	0/0:12,0:15:29.99:0,30,567	0/0:17,0:18:54.15:0,54,915	0/0:18,0:19:51.15:0,51,942	0/0:22,0:22:48.16:0,48,915	0/0:28,0:29:78.19:0,78,1383	1/1:3,23:27:63.11:766,63,0	0/0:23,0:23:57.14:0,57,989	0/0:17,0:21:54.15:0,54,922	0/0:16,0:16:48.12:0,48,851	1/1:1,22:23:63.18:795,63,0	1/1:0,16:16:39.11:493,39,0	1/1:4,21:26:46.70:604,47,0	0/0:15,0:16:48.14:0,48,876	0/1:7,1:26:5.96:6,0,121	0/0:19,0:20:46.39:0,46,815	0/1:2,1:7:3.27:30,0,3
chr10	61902735	.	T	TA	1017.30	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-4.329;DP=615;FS=4.457;HRun=7;HaplotypeScore=73.9221;InbreedingCoeff=0.9404;MQ=64.29;MQ0=0;MQRankSum=2.020;QD=27.49;ReadPosRankSum=-3.952;VQSLOD=2.6588;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,126,1183	0/0:13,0:13:39.03:0,39,368	0/0:8,0:7:11.80:0,12,90	0/0:14,0:14:12.16:0,12,80	0/0:37,0:37:99:0,99,954	0/0:22,0:22:60.01:0,60,556	0/0:20,0:20:57.09:0,57,550	1/1:5,32:37:96.24:1112,96,0	0/0:18,0:18:42.04:0,42,395	0/0:29,0:29:78.09:0,78,741	0/0:17,0:17:48.06:0,48,456	0/0:17,0:17:42.06:0,42,405	0/0:15,0:15:36.05:0,36,347	0/0:14,0:14:33.05:0,33,318	0/0:32,0:32:81.09:0,81,767	0/0:17,0:17:45.04:0,45,423	0/0:27,0:27:72.09:0,72,689	0/0:15,0:15:39.04:0,39,369	0/0:26,0:26:63.06:0,63,597	0/0:29,0:29:81.10:0,81,773	0/0:22,0:22:56.95:0,57,535	0/0:13,0:13:32.64:0,33,299	0/0:14,0:14:33.03:0,33,286	0/0:14,0:14:36.06:0,36,347	0/0:17,0:17:45.06:0,45,430	0/0:35,0:35:96.08:0,96,901	0/0:31,0:30:84.08:0,84,791	0/0:16,0:16:48.08:0,48,463
chr10	61902958	.	T	TTTTG	5135.72	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-7.713;DP=667;FS=5.465;HRun=0;HaplotypeScore=114.1437;InbreedingCoeff=0.9881;MQ=69.36;MQ0=1;MQRankSum=0.257;QD=32.92;ReadPosRankSum=-0.158;VQSLOD=4.7367;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:58.46:0,58,970	0/0:7,0:7:12.02:0,12,170	0/0:30,0:23:17.97:0,18,186	0/0:30,0:29:34.73:0,35,513	0/0:22,0:22:51.16:0,51,797	0/0:20,0:20:41.73:0,42,641	0/0:21,0:21:45.10:0,45,680	1/1:32,0:32:44.97:535,45,0	1/1:10,12:23:22.67:580,23,0	0/0:25,0:25:54.06:0,54,858	0/0:9,0:9:27.09:0,27,439	0/0:24,0:24:48.16:0,48,772	0/0:20,0:20:41.73:0,42,683	0/0:22,0:22:42.14:0,42,683	0/0:34,0:34:75.20:0,75,1180	0/0:30,0:30:47.87:0,48,758	0/0:27,0:27:48.08:0,48,721	0/0:30,0:30:66.17:0,66,988	0/0:27,0:27:57.15:0,57,887	0/0:17,0:17:42.14:0,42,683	0/0:23,0:23:42.12:0,42,635	1/1:1,5:6:15.05:364,15,0	1/1:2,9:11:21.07:508,21,0	1/1:11,21:32:52.12:1220,52,0	0/0:19,0:19:36.12:0,36,586	1/1:9,21:29:60.19:1346,60,0	0/0:36,0:35:82.64:0,83,1337	1/1:7,10:19:24.08:582,24,0
chr10	61903237	.	T	TA	4185.47	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-8.617;DP=346;FS=4.994;HRun=6;HaplotypeScore=34.0587;InbreedingCoeff=0.8819;MQ=61.10;MQ0=0;MQRankSum=0.726;QD=30.11;ReadPosRankSum=0.189;VQSLOD=3.6505;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,21:22:48.15:599,48,0	0/0:8,0:8:24.04:0,24,237	0/0:6,0:3:6.01:0,6,61	0/0:7,0:2:2.96:0,3,20	1/1:1,12:13:36.12:453,36,0	0/0:23,0:23:63.13:0,63,635	0/0:6,0:5:15.03:0,15,153	1/1:3,22:24:66.16:787,66,0	1/1:0,8:8:21.07:262,21,0	0/0:8,0:8:21.04:0,21,214	0/0:9,0:9:27.04:0,27,265	0/0:9,0:9:1.67:0,2,137	0/0:7,0:7:15.02:0,15,148	0/0:11,0:11:30.05:0,30,299	0/0:8,0:8:21.03:0,21,207	0/0:10,0:10:27.06:0,27,275	0/0:32,0:31:84.11:0,84,835	1/1:4,23:26:60.19:755,60,0	0/0:19,0:18:54.08:0,54,531	0/0:6,0:6:18.02:0,18,172	0/0:6,0:6:15.02:0,15,146	1/1:2,0:2:6.01:62,6,0	1/1:0,4:4:12.04:150,12,0	1/1:2,4:6:6.02:75,6,0	0/0:13,0:13:36.08:0,36,367	1/1:1,16:17:48.14:590,48,0	0/0:19,0:19:48.10:0,48,484	1/1:0,15:15:36.12:453,36,0
chr10	61905214	.	T	TA	2888.53	PASS	AB=1.000;AC=41;AF=0.891;AN=46;BaseQRankSum=-0.213;DP=221;FS=23.126;HRun=2;HaplotypeScore=55.9907;InbreedingCoeff=0.3900;MQ=47.32;MQ0=5;MQRankSum=-2.711;QD=15.70;ReadPosRankSum=0.657;VQSLOD=2.0416;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,5:6:15.05:215,15,0	1/1:3,1:4:3.01:43,3,0	0/0:10,0:4:9.03:0,9,111	0/0:13,0:4:8.60:0,9,72	1/1:12,4:16:12.04:162,12,0	1/1:3,11:14:33.11:466,33,0	1/1:2,2:4:6.02:78,6,0	1/1:11,16:27:54.14:749,54,0	1/1:4,1:5:3.01:43,3,0	1/1:4,1:5:3.01:43,3,0	1/1:12,5:16:14.96:169,15,0	./.	1/1:5,1:5:3.01:43,3,0	1/1:4,1:5:3.01:43,3,0	1/1:5,3:6:5.98:63,6,0	./.	1/1:2,1:3:3.48:44,3,0	1/1:4,2:5:9.03:116,9,0	1/1:2,2:3:6.02:85,6,0	1/1:9,1:9:3.01:43,3,0	./.	1/1:5,1:6:6.02:76,6,0	0/1:9,0:8:0:0,0,0	./.	1/1:6,2:7:6.02:86,6,0	1/1:4,4:8:12.04:172,12,0	1/1:7,6:13:18.06:258,18,0	./.
chr10	61905227	.	T	TA	3519.23	PASS	AB=1.000;AC=47;AF=0.979;AN=48;BaseQRankSum=-1.535;DP=109;FS=12.405;HRun=1;HaplotypeScore=47.1617;InbreedingCoeff=0.0560;MQ=57.24;MQ0=2;MQRankSum=-1.653;QD=32.29;ReadPosRankSum=0.827;VQSLOD=1.8416;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,5:7:12:154,12,0	1/1:0,1:1:3.01:45,3,0	1/1:2,1:1:3.01:45,3,0	0/1:9,0:4:0.25:0,0,9	1/1:3,5:8:9.03:134,9,0	1/1:0,11:11:33.11:487,33,0	1/1:0,2:2:6.02:89,6,0	1/1:5,19:24:66.18:928,66,0	1/1:1,2:3:6.02:89,6,0	1/1:1,0:1:3.01:40,3,0	1/1:0,5:5:15.01:192,15,0	1/1:0,1:1:3.01:45,3,0	1/1:0,1:1:3.01:45,3,0	./.	1/1:1,1:2:5.99:66,6,0	./.	1/1:3,0:3:3.44:21,3,0	1/1:0,4:4:12.04:179,12,0	1/1:1,2:3:8.98:109,9,0	1/1:0,1:1:3.01:45,3,0	1/1:0,1:1:3.01:45,3,0	1/1:0,2:2:6.02:89,6,0	./.	./.	1/1:0,2:2:6.02:89,6,0	1/1:2,4:6:18.02:228,18,0	1/1:2,4:6:17.99:221,18,0	1/1:0,3:3:9.03:134,9,0
chr10	61906132	.	C	CA	69.95	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.193;DP=293;FS=2.367;HRun=4;HaplotypeScore=59.3475;InbreedingCoeff=0.6618;MQ=51.95;MQ0=1;MQRankSum=-3.274;QD=6.99;ReadPosRankSum=0.496;VQSLOD=-0.0458;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:5:11.95:0,12,134	0/0:11,0:10:27.55:0,28,307	0/0:11,0:7:17.15:0,17,154	0/0:11,0:9:23.99:0,24,263	0/0:17,0:17:38.77:0,39,442	0/0:16,0:16:29.03:0,29,338	0/0:9,0:8:15:0,15,170	1/1:4,6:5:12.04:156,12,0	0/0:8,0:8:17.96:0,18,204	0/0:16,0:14:29.74:0,30,318	0/0:9,0:9:10.79:0,11,134	0/0:7,0:7:15.04:0,15,170	0/0:6,0:6:8.94:0,9,102	0/0:8,0:8:20.97:0,21,238	0/0:7,0:5:15:0,15,170	0/0:12,0:12:29.46:0,29,339	0/0:15,0:14:30:0,30,327	0/0:17,0:17:42.09:0,42,475	0/0:11,0:9:27.08:0,27,306	0/0:20,0:20:38.49:0,38,441	0/0:5,0:5:15.04:0,15,170	0/0:6,0:6:18.05:0,18,204	0/0:13,0:13:39.11:0,39,442	0/0:12,0:12:36.06:0,36,394	0/0:10,0:9:27.08:0,27,305	0/0:9,0:9:17.88:0,18,204	0/0:6,0:5:5.93:0,6,68	0/0:6,0:6:6.94:0,7,70
chr10	61906360	.	AC	A	1244.69	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=6.451;DP=446;FS=3.320;HRun=1;HaplotypeScore=50.8992;InbreedingCoeff=0.9815;MQ=79.32;MQ0=0;MQRankSum=-1.178;QD=33.64;ReadPosRankSum=1.121;VQSLOD=3.3178;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:81.26:0,81,1271	0/0:10,0:10:30.10:0,30,479	0/0:19,0:19:54.18:0,54,859	0/0:24,0:24:58.58:0,59,998	0/0:9,0:9:27.09:0,27,431	0/0:14,0:14:36.12:0,36,575	0/0:17,0:16:48.15:0,48,737	0/0:24,0:24:69.24:0,69,1103	0/0:15,0:15:45.15:0,45,719	0/0:12,0:12:33.11:0,33,528	0/0:7,0:7:18.06:0,18,288	0/0:18,0:18:45.15:0,45,719	0/0:14,0:14:42.14:0,42,671	0/0:20,0:20:54.18:0,54,862	0/0:19,0:19:54.18:0,54,863	0/0:22,0:22:63.21:0,63,1007	0/0:21,0:21:51.17:0,51,815	0/0:18,0:18:51.17:0,51,815	0/0:11,0:11:33.11:0,33,526	0/0:10,0:10:30.10:0,30,479	0/0:19,0:19:51.17:0,51,815	1/1:0,4:4:12.04:168,12,0	1/1:0,8:8:24.08:335,24,0	1/1:0,25:25:63.21:880,63,0	0/0:14,0:14:42.14:0,42,670	0/0:17,0:17:51.17:0,51,813	0/0:17,0:16:42.14:0,42,671	0/0:6,0:6:18.06:0,18,288
chr10	61907117	.	GA	G	2126.51	PASS	AB=0.706;AC=43;AF=0.768;AN=56;BaseQRankSum=-1.909;DP=477;FS=0.000;HRun=16;HaplotypeScore=73.7909;InbreedingCoeff=-0.0197;MQ=61.86;MQ0=12;MQRankSum=1.140;QD=4.60;ReadPosRankSum=4.098;VQSLOD=1.3814;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,0:31:34.54:100,35,0	0/1:9,2:12:27.83:28,0,38	0/0:15,0:6:10.84:0,11,86	0/1:15,0:8:1.39:1,0,47	1/1:18,0:30:29.55:98,30,0	0/1:6,9:17:41.82:104,0,42	0/1:4,7:11:3.48:88,0,3	0/1:8,9:16:33.82:98,0,34	1/1:3,0:6:6.10:18,6,0	1/1:8,16:24:33.69:241,34,0	0/1:14,8:22:8.58:84,0,9	0/1:4,3:6:16.36:27,0,16	1/1:3,3:6:10.85:60,11,0	1/1:6,8:16:15.44:76,15,0	0/1:4,7:10:7.44:72,0,7	1/1:1,4:5:8.81:54,9,0	1/1:9,18:28:34.22:203,34,0	1/1:5,1:22:32.34:112,32,0	0/1:9,10:18:16.63:122,0,17	1/1:10,9:18:11.11:128,11,0	1/1:4,8:12:14.66:90,15,0	1/1:5,0:10:6.01:17,6,0	1/1:11,0:17:8.04:24,8,0	1/1:11,0:27:26.87:77,27,0	1/1:9,16:27:37.95:226,38,0	1/1:6,0:14:12.63:36,13,0	0/1:6,6:15:1.01:84,0,1	0/1:12,0:12:8.98:10,0,9
chr10	61907266	.	AAG	A	479.30	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=8.189;DP=413;FS=0.552;HRun=0;HaplotypeScore=62.4273;InbreedingCoeff=0.4130;MQ=66.27;MQ0=3;MQRankSum=-0.002;QD=5.15;ReadPosRankSum=4.346;VQSLOD=1.8545;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:40,0:39:47.84:241,48,0	0/0:6,0:6:15:0,15,185	0/0:25,0:15:21.48:0,21,253	0/0:18,0:11:21.28:0,21,188	0/1:19,0:19:25.71:57,0,26	0/0:16,0:16:44.91:0,45,467	0/0:21,0:21:59.99:0,60,873	1/1:10,9:19:2.23:273,2,0	0/0:8,0:8:14.98:0,15,181	0/0:14,0:14:39.86:0,40,423	0/0:17,0:16:45.04:0,45,591	0/0:10,0:10:30.01:0,30,353	0/0:9,0:8:21.03:0,21,304	0/0:15,0:14:39.01:0,39,479	0/0:19,0:19:57.09:0,57,854	0/0:7,0:7:21.02:0,21,269	0/0:21,0:21:63.07:0,63,938	0/1:12,0:11:21.62:22,0,47	0/0:19,0:18:53.33:0,53,606	0/0:6,0:6:17.98:0,18,166	0/0:15,0:15:33.91:0,34,450	0/1:3,0:3:18.66:19,0,19	0/0:9,0:9:15.11:0,15,99	0/0:21,0:21:33.38:0,33,136	0/0:11,0:11:29.55:0,30,361	0/0:11,0:11:32.99:0,33,398	0/0:16,0:16:47.42:0,47,641	0/0:6,0:6:17.98:0,18,224
chr10	61907267	.	AGG	A	1443.12	PASS	AB=1.000;AC=8;AF=0.143;AN=56;BaseQRankSum=4.718;DP=420;FS=5.539;HRun=9;HaplotypeScore=59.2005;InbreedingCoeff=0.7262;MQ=66.03;MQ0=3;MQRankSum=-0.362;QD=15.52;ReadPosRankSum=4.258;VQSLOD=0.9687;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,35:39:93.15:1038,93,0	0/0:5,0:5:12.04:0,12,190	0/0:26,0:15:30.90:0,31,324	0/0:19,0:11:18.49:0,18,232	1/1:4,15:19:27.07:312,27,0	0/0:16,0:16:35.79:0,36,513	0/0:22,0:22:60.17:0,60,879	0/1:16,0:19:63.57:64,0,66	0/0:8,0:8:9.03:0,9,144	0/0:14,0:15:17.85:0,18,363	0/0:16,0:16:30.10:0,30,477	0/0:10,0:10:18.05:0,18,265	0/0:9,0:8:18.06:0,18,281	0/0:14,0:14:30.09:0,30,446	0/0:19,0:19:51.16:0,51,774	0/0:7,0:7:15.05:0,15,239	0/0:21,0:21:60.20:0,60,945	1/1:5,7:11:15.04:175,15,0	0/0:19,0:18:33.07:0,33,477	0/0:7,0:7:6.02:0,6,95	0/0:15,0:15:27.98:0,28,427	0/1:3,0:3:0:0,0,0	0/0:2,0:9:10.08:0,10,44	0/0:5,0:21:28.46:0,28,96	0/0:12,0:13:27.06:0,27,364	0/0:12,0:12:21.06:0,21,311	0/0:16,0:16:42.13:0,42,607	0/0:6,0:6:12.04:0,12,192
chr10	61907430	.	A	AG	1000.17	PASS	AB=0.850;AC=15;AF=0.268;AN=56;BaseQRankSum=10.032;DP=658;FS=19.706;HRun=0;HaplotypeScore=71.4508;InbreedingCoeff=-0.3737;MQ=55.72;MQ0=7;MQRankSum=-10.140;QD=2.73;ReadPosRankSum=-5.052;VQSLOD=-0.5827;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:53,6:58:60.27:60,0,1678	0/1:12,2:14:48.46:48,0,460	0/0:9,3:4:6.02:0,6,84	0/0:19,2:14:32.53:0,33,379	0/0:29,5:34:44.79:0,45,1110	0/0:20,1:21:14.66:0,15,751	0/1:25,9:34:99:179,0,935	0/0:27,3:29:32.28:0,32,958	0/1:12,3:15:95.68:96,0,379	0/1:24,2:26:13.66:14,0,858	0/0:22,4:26:17.66:0,18,777	0/1:15,5:20:48.71:49,0,439	0/1:16,2:18:36.94:37,0,579	0/1:9,4:13:99:103,0,302	0/0:25,0:25:69.23:0,69,964	0/0:15,0:15:45.11:0,45,593	0/1:39,6:44:62.91:63,0,1394	0/1:23,4:26:22.49:22,0,762	0/0:24,1:23:23.32:0,23,819	0/0:20,1:21:14.65:0,15,730	0/1:13,3:16:71.59:72,0,419	0/1:7,1:8:21.47:21,0,255	0/0:12,0:12:36.12:0,36,502	0/0:21,0:21:57.16:0,57,746	0/1:19,4:23:76.38:76,0,577	0/1:25,4:28:52.31:52,0,951	0/0:25,2:27:32.68:0,33,938	0/1:12,7:19:99:264,0,446
chr10	61907617	.	C	CA	1577.79	PASS	AB=0.900;AC=13;AF=0.232;AN=56;BaseQRankSum=8.351;DP=512;FS=3.112;HRun=10;HaplotypeScore=73.8042;InbreedingCoeff=0.8091;MQ=62.77;MQ0=1;MQRankSum=-1.942;QD=13.04;ReadPosRankSum=-0.258;VQSLOD=3.6699;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:21,20:40:36.09:732,36,0	0/0:8,0:8:23.97:0,24,197	0/0:24,0:14:25.45:0,25,192	0/0:18,0:12:17.95:0,18,146	1/1:7,7:14:21.04:217,21,0	0/0:21,0:21:53.91:0,54,443	0/0:19,0:20:31.92:0,32,252	0/0:28,0:29:64.84:0,65,444	0/0:18,0:18:29.91:0,30,245	0/0:21,0:21:53.92:0,54,441	0/0:13,0:13:23.94:0,24,196	0/0:15,0:15:7.02:0,7,263	0/0:14,0:15:34.01:0,34,255	0/0:14,0:15:35.45:0,35,277	0/0:19,0:19:47.93:0,48,394	0/0:18,0:19:40.97:0,41,326	0/0:28,0:28:56.71:0,57,460	1/1:19,7:26:2.41:321,2,0	0/0:11,0:11:26.92:0,27,216	0/0:14,0:14:26.78:0,27,210	0/0:24,0:24:47.92:0,48,394	1/1:2,2:4:3.01:31,3,0	1/1:2,7:10:23.86:203,24,0	1/1:6,11:17:21.80:237,22,0	0/0:14,0:15:28.97:0,29,227	0/0:20,0:22:43.93:0,44,347	0/0:19,0:21:34.78:0,35,273	0/1:8,1:9:11.01:11,0,127
chr10	61907628	.	G	GA	2342.17	PASS	AB=0.917;AC=15;AF=0.268;AN=56;BaseQRankSum=4.354;DP=515;FS=11.482;HRun=10;HaplotypeScore=65.9614;InbreedingCoeff=0.8754;MQ=65.62;MQ0=1;MQRankSum=0.187;QD=14.64;ReadPosRankSum=-1.789;VQSLOD=2.2397;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:25,19:43:85.45:910,85,0	0/0:15,0:15:41.99:0,42,363	0/0:24,0:14:24.26:0,24,196	0/0:14,0:10:11.77:0,12,122	1/1:5,13:19:33.56:358,34,0	0/0:21,0:21:50.97:0,51,441	0/0:20,0:20:48.03:0,48,397	1/1:7,23:30:46.24:720,46,0	0/0:16,0:16:38.98:0,39,338	0/0:26,0:26:47.89:0,48,408	0/0:12,0:12:32.97:0,33,282	0/0:15,0:15:32.57:0,33,330	0/0:15,0:15:35.99:0,36,312	0/0:15,0:15:32.87:0,33,271	0/0:18,0:18:47.99:0,48,416	0/0:19,0:19:50.96:0,51,438	0/0:25,0:25:62.86:0,63,538	1/1:6,17:24:10.82:337,11,0	0/0:19,0:19:47.97:0,48,411	0/1:10,1:11:9.33:9,0,158	0/0:20,0:20:50.98:0,51,442	1/1:4,0:5:4.40:17,4,0	1/1:9,0:11:16.79:90,17,0	1/1:2,0:16:17.67:92,18,0	0/0:14,0:14:29.99:0,30,259	0/0:18,0:18:47.97:0,48,415	0/0:19,0:19:53.83:0,54,468	0/0:10,0:10:29.86:0,30,244
chr10	61908925	.	CGT	C	218.51	PASS	AB=0.896;AC=11;AF=0.196;AN=56;BaseQRankSum=5.107;DP=683;FS=14.959;HRun=0;HaplotypeScore=100.5707;InbreedingCoeff=-0.3002;MQ=60.98;MQ0=14;MQRankSum=1.175;QD=0.86;ReadPosRankSum=1.168;VQSLOD=0.9010;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:45:10.65:0,11,101	0/0:5,0:5:12.04:0,12,183	0/0:36,0:15:6.02:0,6,77	0/0:33,0:18:5.97:0,6,46	0/0:21,0:24:2.83:0,3,25	0/1:7,4:11:49.50:49,0,155	0/1:22,2:24:48.59:49,0,333	0/0:31,0:30:44.95:0,45,474	0/0:15,0:33:41.99:0,42,366	0/1:29,2:31:21.06:21,0,549	0/0:27,2:29:14.38:0,14,644	0/0:33,0:34:40.03:0,40,764	0/1:16,0:16:6.40:6,0,339	0/1:11,3:14:37.43:37,0,324	0/1:22,1:24:8.81:9,0,460	0/1:29,3:32:50.19:50,0,590	0/1:29,1:32:33.46:33,0,467	0/0:10,0:8:5.50:0,5,37	0/1:19,2:21:49.52:50,0,165	0/1:17,1:20:28.93:29,0,332	0/0:28,1:29:2.34:0,2,470	0/0:17,0:21:9:0,9,78	0/0:13,0:17:4.82:0,5,31	0/0:23,0:27:3:0,3,26	0/0:16,0:16:21.07:0,21,321	0/0:23,0:22:46.96:0,47,383	0/1:26,2:29:24.49:24,0,674	0/0:4,0:9:12:0,12,105
chr10	61909224	.	GA	G	1092.71	PASS	AB=0.816;AC=16;AF=0.286;AN=56;BaseQRankSum=1.978;DP=543;FS=2.019;HRun=15;HaplotypeScore=67.2743;InbreedingCoeff=0.4637;MQ=62.77;MQ0=6;MQRankSum=0.646;QD=4.84;ReadPosRankSum=2.934;VQSLOD=1.9774;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,14:23:34.53:217,35,0	0/0:4,0:4:7.82:0,8,57	0/1:28,1:12:7.24:7,0,46	0/1:27,0:16:11.96:12,0,24	1/1:10,11:21:8.28:183,8,0	0/0:22,0:23:48.37:0,48,382	0/1:11,1:13:0.30:0,0,142	0/0:27,0:26:37.79:0,38,339	0/0:10,0:10:23.91:0,24,195	0/0:22,2:25:13.27:0,13,344	0/0:28,1:30:27.60:0,28,353	0/0:14,0:14:29.45:0,29,235	0/0:17,0:17:17.53:0,18,225	0/0:11,1:12:10.70:0,11,211	0/0:8,0:11:14.82:0,15,113	0/0:18,1:19:30.11:0,30,364	0/0:33,2:36:39.73:0,40,553	1/1:4,19:24:25.73:190,26,0	0/0:24,1:26:14.52:0,15,333	0/0:15,0:15:6.58:0,7,201	0/0:11,0:11:21:0,21,185	0/1:6,7:13:10.35:62,0,10	1/1:10,8:18:2.48:167,2,0	0/1:13,9:24:2.77:211,0,3	0/0:12,0:12:13.68:0,14,210	0/1:12,11:24:36.64:157,0,37	0/0:24,0:24:33.45:0,33,306	1/1:4,4:8:8.78:58,9,0
chr10	61909974	.	A	AAAG	555.61	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-5.380;DP=627;FS=1.970;HRun=0;HaplotypeScore=95.1177;InbreedingCoeff=0.9607;MQ=60.53;MQ0=10;MQRankSum=3.086;QD=19.84;ReadPosRankSum=-5.269;VQSLOD=2.5897;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:93.19:0,93,1121	0/0:7,0:7:18.03:0,18,203	0/0:24,0:10:24.01:0,24,274	0/0:14,0:11:16.27:0,16,207	0/0:25,0:25:60.15:0,60,762	0/0:21,0:21:54.16:0,54,709	0/0:25,0:25:47.60:0,48,503	1/1:10,15:28:51.93:650,52,0	0/0:14,0:14:24.07:0,24,315	0/0:30,0:30:67.07:0,67,846	0/0:21,0:21:42.10:0,42,521	0/0:22,0:22:45.13:0,45,591	0/0:19,0:19:39.09:0,39,478	0/0:18,0:18:39.09:0,39,465	0/0:22,0:22:42.11:0,42,519	0/0:25,0:25:60.13:0,60,761	0/0:31,0:31:66.20:0,66,872	0/0:25,0:25:42.09:0,42,514	0/0:22,0:20:42.11:0,42,522	0/0:19,0:19:42.04:0,42,502	0/0:18,0:18:38.71:0,39,522	0/0:30,0:30:57.17:0,57,754	0/0:19,0:18:38.90:0,39,442	0/0:21,0:21:51.15:0,51,666	0/0:15,0:14:29.58:0,30,312	0/0:33,0:33:75.17:0,75,904	0/0:24,0:23:56.63:0,57,690	0/0:11,0:9:15.05:0,15,207
chr10	61910300	.	GA	G	2100.02	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=10.306;DP=711;FS=11.699;HRun=5;HaplotypeScore=66.2294;InbreedingCoeff=0.9998;MQ=84.45;MQ0=0;MQRankSum=-1.569;QD=27.27;ReadPosRankSum=3.504;VQSLOD=3.0132;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,117,1562	0/0:11,0:11:33.11:0,33,451	0/0:24,0:23:49.04:0,49,654	0/0:25,0:25:69.22:0,69,909	0/0:31,0:31:93.31:0,93,1260	0/0:14,0:14:39.12:0,39,518	0/0:26,0:26:69.23:0,69,939	0/0:24,0:24:69.23:0,69,939	0/0:19,0:19:54.18:0,54,739	0/0:40,0:40:99:0,108,1453	0/0:26,0:26:75.23:0,75,994	0/0:29,0:29:84.28:0,84,1149	0/0:30,0:30:87.28:0,87,1174	0/0:27,0:27:72.24:0,72,985	0/0:25,0:25:69.21:0,69,923	0/0:33,0:33:93.30:0,93,1256	0/0:31,0:31:84.28:0,84,1146	0/0:14,0:14:39.13:0,39,531	0/0:19,0:19:54.16:0,54,717	0/0:19,0:19:54.18:0,54,738	0/0:25,0:25:66.15:0,66,847	1/1:1,26:27:75.21:848,75,0	1/1:0,15:15:39.11:442,39,0	1/1:4,31:35:84.24:953,84,0	0/0:19,0:18:51.17:0,51,696	0/0:46,0:46:99:0,129,1762	0/0:24,0:24:66.21:0,66,887	0/0:12,0:12:36.12:0,36,490
chr10	61910437	.	TG	T	413.08	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.028;DP=622;FS=3.716;HRun=3;HaplotypeScore=63.4373;InbreedingCoeff=0.9975;MQ=88.08;MQ0=0;MQRankSum=-0.958;QD=25.82;ReadPosRankSum=-3.478;VQSLOD=2.0857;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,114,1635	0/0:9,0:9:24.04:0,24,345	0/0:31,0:31:89.61:0,90,1200	0/0:22,0:22:58.10:0,58,702	0/0:22,0:22:66.21:0,66,932	0/0:21,0:21:60.20:0,60,863	0/0:30,0:30:87.28:0,87,1233	1/1:2,14:16:42.12:508,42,0	0/0:17,0:17:51.16:0,51,715	0/0:18,0:18:51.17:0,51,735	0/0:15,0:15:45.15:0,45,648	0/0:28,0:28:81.23:0,81,1143	0/0:17,0:17:48.16:0,48,690	0/0:25,0:25:72.22:0,72,1016	0/0:12,0:12:36.12:0,36,518	0/0:21,0:21:63.21:0,63,907	0/0:38,0:38:99:0,108,1535	0/0:12,0:12:33.11:0,33,474	0/0:18,0:18:48.16:0,48,691	0/0:26,0:26:78.25:0,78,1104	0/0:34,0:34:96.29:0,96,1331	0/0:18,0:18:54.18:0,54,777	0/0:15,0:15:45.15:0,45,647	0/0:20,0:20:54.16:0,54,757	0/0:16,0:16:45.12:0,45,626	0/0:31,0:31:93.30:0,93,1311	0/0:35,0:35:99:0,102,1430	0/0:16,0:16:45.15:0,45,638
chr10	61910613	.	CT	C	1493.21	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=7.259;DP=557;FS=0.584;HRun=2;HaplotypeScore=65.8666;InbreedingCoeff=0.9770;MQ=83.02;MQ0=0;MQRankSum=-3.793;QD=31.77;ReadPosRankSum=2.418;VQSLOD=3.4974;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:69.22:0,69,1011	0/0:8,0:8:21.07:0,21,314	0/0:11,0:11:9.05:0,9,365	0/0:22,0:22:59.36:0,59,687	0/0:12,0:12:36.12:0,36,537	0/0:24,0:24:66.22:0,66,971	0/0:30,0:30:90.29:0,90,1320	0/0:31,0:31:93.30:0,93,1358	0/0:25,0:25:75.25:0,75,1121	0/0:23,0:23:69.23:0,69,1033	0/0:17,0:17:51.16:0,51,744	0/0:16,0:16:48.16:0,48,720	0/0:17,0:17:51.17:0,51,765	0/0:29,0:29:87.28:0,87,1283	0/0:16,0:16:48.16:0,48,720	0/0:12,0:12:36.12:0,36,538	0/0:24,0:24:72.24:0,72,1079	0/0:16,0:16:45.15:0,45,675	0/0:24,0:24:72.24:0,72,1078	0/0:9,0:9:27.09:0,27,405	0/0:43,0:43:99:0,129,1934	1/1:1,12:13:33.11:428,33,0	1/1:0,12:12:27.09:350,27,0	1/1:0,22:22:66.21:857,66,0	0/0:18,0:18:45.15:0,45,674	0/0:27,0:27:81.27:0,81,1197	0/0:24,0:24:66.22:0,66,988	0/0:9,0:9:27.09:0,27,402
chr10	61910986	.	GAGA	G	215.54	PASS	AB=0.875;AC=7;AF=0.125;AN=56;BaseQRankSum=2.735;DP=346;FS=2.863;HRun=0;HaplotypeScore=60.6939;InbreedingCoeff=0.6850;MQ=71.53;MQ0=1;MQRankSum=-1.163;QD=7.43;ReadPosRankSum=-2.898;VQSLOD=1.6618;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:69.14:0,69,931	0/0:3,0:3:9.03:0,9,198	0/0:18,0:18:26.07:0,26,758	0/0:13,0:10:24.05:0,24,464	0/0:15,0:15:42.13:0,42,598	0/0:17,0:17:45.14:0,45,926	0/0:18,0:18:54.19:0,54,1181	0/1:12,0:13:42.41:42,0,53	0/0:13,0:13:39.12:0,39,801	0/0:15,0:15:45.15:0,45,928	0/0:16,0:16:39.59:0,40,807	0/0:16,0:16:48.16:0,48,1063	0/0:14,0:13:33.11:0,33,667	0/0:11,0:11:30.10:0,30,639	0/0:13,0:13:39.12:0,39,784	0/0:19,0:19:48.14:0,48,1034	0/0:18,0:18:48.16:0,48,1045	0/0:10,0:10:27.09:0,27,430	0/0:16,0:16:48.16:0,48,936	0/0:5,0:5:15.02:0,15,297	0/0:13,0:13:39.12:0,39,764	1/1:2,2:5:6.01:60,6,0	1/1:2,2:5:9.03:128,9,0	1/1:5,0:5:8.28:115,8,0	0/0:9,0:9:27.09:0,27,564	0/0:6,0:6:18.06:0,18,283	0/0:13,0:13:39.13:0,39,858	0/0:1,0:1:3.01:0,3,46
chr10	61910988	.	GA	G	181.12	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=2.426;DP=342;FS=1.101;HRun=1;HaplotypeScore=56.1572;InbreedingCoeff=0.8532;MQ=72.81;MQ0=1;MQRankSum=-0.741;QD=6.47;ReadPosRankSum=-2.752;VQSLOD=-0.3557;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:65.85:0,66,679	0/0:3,0:3:9.03:0,9,127	0/0:19,0:19:31.58:0,32,450	0/0:13,0:10:21.51:0,22,262	0/0:15,0:15:41.95:0,42,495	0/0:17,0:17:45.01:0,45,558	0/0:19,0:19:54.09:0,54,691	1/1:11,2:12:17.99:172,18,0	0/0:12,0:12:36.06:0,36,470	0/0:15,0:15:45.10:0,45,546	0/0:15,0:15:36.92:0,37,484	0/0:16,0:16:48.14:0,48,645	0/0:14,0:13:33.02:0,33,391	0/0:12,0:12:29.99:0,30,368	0/0:12,0:12:36.04:0,36,452	0/0:18,0:18:45.12:0,45,598	0/0:17,0:17:48.12:0,48,621	0/0:10,0:10:27.09:0,27,360	0/0:16,0:16:48.07:0,48,531	0/0:4,0:4:12.04:0,12,169	0/0:12,0:12:36.01:0,36,428	1/1:4,1:5:5.87:36,6,0	1/1:4,1:5:8.80:59,9,0	1/1:5,0:5:7.85:56,8,0	0/0:10,0:10:26.90:0,27,338	0/0:6,0:6:17.99:0,18,187	0/0:13,0:13:39.10:0,39,534	0/0:1,0:1:3.01:0,3,34
chr10	61911783	.	TA	T	638.94	PASS	AB=0.930;AC=8;AF=0.143;AN=56;BaseQRankSum=4.014;DP=341;FS=9.781;HRun=13;HaplotypeScore=39.7638;InbreedingCoeff=0.5954;MQ=61.76;MQ0=2;MQRankSum=2.540;QD=7.70;ReadPosRankSum=1.102;VQSLOD=1.0167;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,17:24:50.18:357,50,0	0/0:3,0:3:6.01:0,6,58	0/0:12,1:7:8.84:0,9,70	0/0:6,0:5:6:0,6,54	1/1:2,10:13:25.82:177,26,0	0/0:15,0:15:35.94:0,36,324	0/0:7,1:8:21.03:0,21,204	0/0:26,2:27:32.57:0,33,455	0/1:8,1:9:0.93:1,0,144	0/0:20,2:22:4.23:0,4,351	0/0:11,0:12:23.87:0,24,219	0/0:9,0:9:15:0,15,135	0/0:5,0:5:12.02:0,12,117	0/0:9,0:9:18.03:0,18,175	0/0:11,1:13:7.92:0,8,216	0/0:9,0:9:17.98:0,18,165	0/0:25,0:25:57.08:0,57,548	1/1:2,11:13:32.80:241,33,0	0/1:23,1:24:6.05:6,0,280	0/0:9,0:9:21.01:0,21,193	0/0:8,0:8:21.02:0,21,198	0/0:0,0:5:11.58:0,12,66	0/0:2,0:3:2.84:0,3,14	0/0:0,0:5:5.68:0,6,29	0/0:10,0:10:18.03:0,18,175	0/0:15,0:17:35.85:0,36,319	0/0:6,0:5:15.02:0,15,146	0/0:18,0:17:36.01:0,36,335
chr10	61912728	.	T	TCC	157.27	PASS	AB=0.505;AC=30;AF=0.600;AN=50;BaseQRankSum=-0.125;DP=168;FS=0.914;HRun=0;HaplotypeScore=366.7910;InbreedingCoeff=0.0781;MQ=29.00;MQ0=0;MQRankSum=-0.491;QD=1.14;ReadPosRankSum=3.116;VQSLOD=1.0121;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:0,9:9:10.59:11,0,14	1/1:0,2:2:0.63:4,1,0	./.	./.	0/1:0,5:5:1.12:4,0,1	0/0:0,8:8:2.80:0,3,13	1/1:0,1:1:2.90:16,3,0	./.	0/1:1,18:20:8.26:8,0,31	1/1:0,6:6:0.03:16,0,0	1/1:0,3:3:7.99:35,8,0	1/1:0,10:10:2.59:6,3,0	0/1:1,9:10:11.11:21,0,11	0/1:0,9:9:0.66:16,0,1	1/1:0,16:16:4.06:36,4,0	0/1:0,13:13:3.02:14,0,3	1/1:0,2:2:2.44:6,2,0	0/0:0,3:3:2.45:0,2,8	0/1:0,5:5:3.38:4,0,3	0/0:1,4:5:1.60:0,2,20	1/1:0,1:1:1.82:5,2,0	0/0:0,4:4:0.20:0,0,1	1/1:0,4:4:1.05:20,1,0	0/0:0,7:7:3.43:0,3,10	0/1:0,6:6:4.64:5,0,19	1/1:0,9:9:7.32:32,7,0	1/1:1,6:7:1.31:17,1,0	0/0:0,3:3:2.11:0,2,9
chr10	61913116	.	A	AAGG	8530.25	PASS	AC=32;AF=0.593;AN=54;BaseQRankSum=1.711;DP=532;FS=6.790;HRun=0;HaplotypeScore=246.2718;InbreedingCoeff=0.9031;MQ=48.04;MQ0=2;MQRankSum=-3.575;QD=29.72;ReadPosRankSum=1.896;VQSLOD=4.2482;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:75.16:0,75,841	./.	0/0:20,0:14:21.91:0,22,173	0/0:41,0:21:1.13:0,1,228	0/0:16,0:16:39.10:0,39,433	1/1:5,21:26:48.16:967,48,0	1/1:5,13:19:3.46:412,3,0	0/0:14,0:13:16.74:0,17,161	0/0:32,0:32:78.12:0,78,890	1/1:8,12:23:36.96:607,37,0	1/1:2,14:16:33.11:657,33,0	1/1:7,14:22:27.09:530,27,0	1/1:4,14:18:36.12:730,36,0	1/1:3,11:16:23.78:472,24,0	1/1:6,17:23:33.11:654,33,0	1/1:5,15:20:36.12:733,36,0	0/0:26,0:26:63.08:0,63,665	0/0:13,0:13:36.46:0,36,379	1/1:11,10:21:24.04:424,24,0	1/1:6,9:17:23.29:405,23,0	1/1:4,6:11:12:214,12,0	0/0:21,0:21:54.14:0,54,589	0/0:10,0:10:17.96:0,18,178	0/0:14,0:14:39.08:0,39,446	1/1:3,9:12:6.02:98,6,0	1/1:5,21:26:57.17:1014,57,0	1/1:2,12:14:24.08:491,24,0	1/1:0,3:3:6.02:122,6,0
chr10	61914162	.	TTC	T	1426.98	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=-3.697;DP=600;FS=0.000;HRun=0;HaplotypeScore=131.9015;InbreedingCoeff=0.6204;MQ=69.53;MQ0=1;MQRankSum=4.522;QD=12.09;ReadPosRankSum=-1.734;VQSLOD=2.9760;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:84.69:0,85,738	1/1:4,5:9:20.93:239,21,0	0/0:34,0:22:38.63:0,39,361	0/0:36,0:17:26.03:0,26,317	0/0:24,0:24:42.13:0,42,360	0/0:12,0:12:28.47:0,28,136	0/0:19,0:19:22.64:0,23,105	1/1:10,26:36:77.88:826,78,0	0/0:16,0:16:44.98:0,45,578	0/0:24,0:24:42.79:0,43,295	0/0:12,0:12:22.04:0,22,119	0/0:24,0:24:29.02:0,29,186	0/0:25,0:25:53.80:0,54,282	0/0:12,0:12:21.09:0,21,95	0/0:20,0:20:38.76:0,39,182	0/0:20,0:20:37.90:0,38,180	1/1:2,14:16:26.74:325,27,0	0/0:25,0:25:49.28:0,49,378	0/0:19,0:19:31:0,31,166	0/0:24,0:24:34.73:0,35,136	0/0:17,0:17:36.36:0,36,219	1/1:20,0:20:0.31:133,0,0	0/1:14,0:13:11.11:11,0,19	0/1:14,0:13:29.40:47,0,29	0/0:29,0:29:52.10:0,52,270	0/0:22,0:22:55.77:0,56,306	0/0:27,0:26:44.93:0,45,254	0/1:9,0:9:4.42:4,0,37
chr10	61914171	.	TC	T	1431.42	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=-4.700;DP=625;FS=1.454;HRun=1;HaplotypeScore=125.3742;InbreedingCoeff=0.9119;MQ=65.33;MQ0=3;MQRankSum=4.204;QD=9.74;ReadPosRankSum=-2.814;VQSLOD=0.4591;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:41:84.98:0,85,612	1/1:9,1:10:6.30:151,6,0	0/0:32,0:16:42.58:0,43,359	0/0:36,0:17:19.52:0,20,297	0/0:22,0:22:40.80:0,41,290	0/0:13,0:12:33.74:0,34,187	0/0:20,0:20:36.48:0,36,169	1/1:36,2:37:67.90:617,68,0	0/0:16,0:16:43.07:0,43,428	0/0:20,0:20:52.29:0,52,363	0/0:11,0:11:28.08:0,28,161	0/0:25,0:25:36.83:0,37,256	0/0:23,0:23:64.49:0,64,375	0/0:11,0:11:25.15:0,25,135	0/0:18,0:18:45.08:0,45,256	0/0:20,0:20:45.13:0,45,255	1/1:21,1:22:11.83:189,12,0	0/0:24,0:24:49.07:0,49,287	0/0:18,0:18:43.54:0,44,247	0/0:24,0:24:53.18:0,53,258	0/0:19,0:19:39.14:0,39,252	1/1:24,0:24:50.04:356,50,0	1/1:16,0:15:20.22:111,20,0	1/1:27,1:27:26.07:186,26,0	0/0:28,0:28:69.14:0,69,385	0/0:26,0:26:67.64:0,68,413	0/0:29,0:28:61.79:0,62,359	0/1:9,0:9:1.16:1,0,74
chr10	61914172	.	CTTTT	C	8076.75	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=8.200;DP=635;FS=1.186;HRun=15;HaplotypeScore=133.0526;InbreedingCoeff=0.9923;MQ=65.79;MQ0=3;MQRankSum=-3.319;QD=26.14;ReadPosRankSum=7.408;VQSLOD=3.0735;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:41:71.62:0,72,990	0/0:10,0:10:24.42:0,24,265	0/0:34,0:16:16.64:0,17,161	0/0:40,0:19:18.18:0,18,289	0/0:10,0:22:52.60:0,53,591	1/1:4,9:12:27.04:367,27,0	1/1:1,17:18:33.08:449,33,0	0/0:39,0:39:90.64:0,91,1184	0/0:15,0:17:45.15:0,45,905	1/1:8,12:20:35.71:486,36,0	1/1:3,8:11:17.89:238,18,0	1/1:6,18:24:31.17:438,31,0	1/1:7,16:23:49.31:657,49,0	1/1:2,9:11:21.02:286,21,0	1/1:3,14:17:37.04:527,37,0	1/1:3,17:20:39.03:530,39,0	0/0:28,0:28:63.13:0,63,857	0/0:11,0:24:45.05:0,45,574	1/1:3,14:18:45.05:538,45,0	1/1:2,21:24:54.11:721,54,0	1/1:9,9:19:15.39:241,15,0	0/0:25,0:25:57.14:0,57,944	0/0:16,0:15:28.91:0,29,488	0/0:28,0:27:34:0,34,629	1/1:6,21:28:60.04:799,60,0	1/1:6,20:26:60.01:776,60,0	1/1:5,23:28:54.96:737,55,0	1/1:1,8:9:21.07:286,21,0
chr10	61914626	.	T	TCAAA	15963.66	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=-14.674;DP=728;FS=4.152;HRun=0;HaplotypeScore=100.0182;InbreedingCoeff=0.9732;MQ=56.46;MQ0=20;MQRankSum=0.483;QD=37.39;ReadPosRankSum=0.924;VQSLOD=4.8645;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,105,1678	0/0:3,0:3:6.02:0,6,98	0/0:13,0:4:9.02:0,9,124	0/0:20,0:8:15.05:0,15,231	0/0:35,0:35:75.25:0,75,1190	1/1:3,13:15:30.10:730,30,0	1/1:14,18:34:33.06:790,33,0	0/0:37,0:35:57.18:0,57,888	0/0:22,0:22:51.16:0,51,799	1/1:11,17:30:63.17:1450,63,0	1/1:4,11:15:27.09:622,27,0	1/1:15,18:32:48.16:1166,48,0	1/1:8,10:18:24.08:584,24,0	1/1:6,15:22:30.10:730,30,0	1/1:11,22:33:57.20:1355,57,0	1/1:11,15:24:36.12:873,36,0	0/0:33,0:33:70.79:0,71,1127	0/0:23,0:23:57.17:0,57,896	1/1:13,8:23:33.09:720,33,0	1/1:13,9:22:33.11:737,33,0	1/1:22,24:48:69.24:1680,69,0	0/0:16,0:16:42.13:0,42,653	0/0:25,0:25:54.16:0,54,819	0/0:32,0:33:78.26:0,78,1238	1/1:7,18:25:48.16:1161,48,0	1/1:9,20:29:60.18:1406,60,0	1/1:15,21:36:63.22:1521,63,0	1/1:7,6:12:18.06:438,18,0
chr10	61914925	.	C	CAGACTCACATCAGA	55137.17	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=-4.879;DP=721;FS=0.959;HRun=0;HaplotypeScore=254.8338;InbreedingCoeff=0.9655;MQ=71.89;MQ0=1;MQRankSum=-19.562;QD=132.54;ReadPosRankSum=4.044;VQSLOD=4.8154;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,154,6017	0/0:9,0:9:18.06:0,18,733	0/0:23,0:23:54.16:0,54,2025	0/0:15,0:15:39.12:0,39,1015	0/0:29,0:29:87.28:0,87,3460	1/1:6,14:22:57.20:3587,57,0	1/1:28,11:42:81.49:4401,81,0	0/0:22,0:22:66.21:0,66,2367	0/0:21,0:21:54.18:0,54,2179	1/1:12,7:25:66.18:3336,66,0	1/1:8,4:14:18.06:1198,18,0	1/1:12,13:28:75.14:4542,75,0	1/1:11,13:25:63.18:3860,63,0	1/1:15,17:32:78.18:4943,78,0	1/1:17,14:33:63.11:3733,63,0	1/1:19,14:39:75.22:4762,75,0	0/0:32,0:32:87.26:0,87,3279	0/0:19,0:19:51.15:0,51,1933	1/1:17,5:23:63.20:3559,63,0	1/1:12,8:22:39.09:2311,39,0	1/1:4,3:9:3.01:210,3,0	0/0:25,0:25:72.25:0,72,2915	0/0:14,0:14:39.12:0,39,1464	0/0:42,0:42:99:0,126,4751	1/1:11,11:25:47.63:2969,48,0	1/1:13,14:30:84.29:4984,84,0	1/1:29,11:42:99:6111,99,0	1/1:3,1:4:9.03:631,9,0
chr10	61916830	.	C	CGAAAAAAA	36582	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-6.419;DP=710;FS=12.932;HRun=0;HaplotypeScore=150.2239;InbreedingCoeff=0.9961;MQ=48.17;MQ0=8;MQRankSum=-14.286;QD=65.44;ReadPosRankSum=-2.478;VQSLOD=3.3831;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:19,19:42:81.28:3126,81,0	1/1:10,14:25:48.02:1923,48,0	0/0:17,0:10:21.05:0,21,449	0/0:32,0:17:39.06:0,39,796	1/1:14,9:21:42.11:1397,42,0	1/1:19,11:30:39.10:1495,39,0	1/1:17,12:29:39.13:1526,39,0	1/1:21,4:26:27.06:893,27,0	0/0:29,0:29:72.22:0,72,1726	1/1:20,16:36:78.27:3075,78,0	1/1:14,10:23:41.99:1609,42,0	1/1:10,11:22:36.08:1324,36,0	1/1:9,4:12:21.07:790,21,0	1/1:9,11:20:33.11:1340,33,0	1/1:9,11:20:45.15:1841,45,0	1/1:13,10:26:45.15:1839,45,0	1/1:15,17:35:55.43:2165,55,0	1/1:14,11:28:45.11:1669,45,0	1/1:17,5:23:27.08:946,27,0	1/1:16,14:31:57.20:2131,57,0	1/1:8,3:12:21.07:687,21,0	0/0:22,0:22:48.16:0,48,1218	0/0:14,0:14:36.11:0,36,857	0/0:37,0:37:84.29:0,84,2119	1/1:12,9:20:39.13:1422,39,0	1/1:15,16:33:75.24:2850,75,0	1/1:11,14:28:48.16:1915,48,0	1/1:7,3:10:21.07:619,21,0
chr10	61919257	.	GC	G	4985.77	PASS	AC=48;AF=0.960;AN=50;BaseQRankSum=-1.682;DP=210;FS=6.743;HRun=3;HaplotypeScore=75.4148;InbreedingCoeff=0.2305;MQ=46.15;MQ0=0;MQRankSum=-1.732;QD=24.09;ReadPosRankSum=0.746;VQSLOD=3.7461;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,14:14:18.05:223,18,0	1/1:1,1:2:6.02:73,6,0	1/1:0,1:1:3.01:37,3,0	0/0:2,0:2:2.98:0,3,22	./.	1/1:0,4:4:12.04:148,12,0	1/1:1,28:29:60.19:737,60,0	1/1:2,3:5:9.03:111,9,0	1/1:0,1:1:3.01:33,3,0	1/1:0,12:12:36.11:444,36,0	./.	1/1:0,3:3:9.03:111,9,0	1/1:0,5:5:15.05:185,15,0	1/1:0,6:6:12.04:148,12,0	1/1:0,3:3:6.02:74,6,0	1/1:0,2:2:6.02:74,6,0	1/1:1,20:21:48.15:589,48,0	1/1:1,14:15:36.11:445,36,0	1/1:0,12:12:33.06:380,33,0	1/1:0,1:1:3.01:37,3,0	1/1:2,33:35:36.08:446,36,0	1/1:0,3:3:9.03:111,9,0	./.	1/1:2,16:18:12.02:148,12,0	1/1:0,2:2:3.01:37,3,0	1/1:3,4:7:15.03:172,15,0	1/1:0,4:4:12.04:148,12,0	1/1:0,2:2:6.02:74,6,0
chr10	61921136	.	CCTT	C	2140.09	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.104;DP=622;FS=2.658;HRun=0;HaplotypeScore=89.0140;InbreedingCoeff=0.9996;MQ=85.19;MQ0=0;MQRankSum=-2.057;QD=37.55;ReadPosRankSum=0.140;VQSLOD=4.5300;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,138,2956	1/1:0,12:12:33.07:518,33,0	0/0:23,0:22:63.21:0,63,1258	0/0:22,0:22:57.11:0,57,1133	0/0:23,0:23:69.24:0,69,1517	0/0:11,0:11:30.10:0,30,680	0/0:17,0:17:51.18:0,51,1148	1/1:3,19:22:54.14:865,54,0	0/0:22,0:22:63.21:0,63,1365	0/0:19,0:19:54.19:0,54,1210	0/0:24,0:24:66.23:0,66,1480	0/0:26,0:26:75.26:0,75,1699	0/0:18,0:18:54.18:0,54,1185	0/0:24,0:24:66.23:0,66,1496	0/0:31,0:31:93.31:0,93,2029	0/0:26,0:26:78.27:0,78,1736	1/1:0,23:23:54.18:899,54,0	0/0:35,0:35:81.42:0,81,2119	0/0:14,0:13:31.67:0,32,737	0/0:16,0:16:45.14:0,45,970	0/0:21,0:21:63.18:0,63,1281	0/0:24,0:24:69.24:0,69,1532	0/0:15,0:15:42.14:0,42,949	0/0:24,0:24:69.24:0,69,1564	0/0:15,0:15:42.14:0,42,890	0/0:18,0:18:51.17:0,51,1125	0/0:33,0:32:96.30:0,96,2085	0/0:18,0:18:45.15:0,45,988
chr10	61921795	.	C	CGAGT	7178.98	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-10.079;DP=797;FS=1.255;HRun=0;HaplotypeScore=173.9957;InbreedingCoeff=0.9968;MQ=80.60;MQ0=0;MQRankSum=-3.625;QD=52.02;ReadPosRankSum=-0.375;VQSLOD=5.3709;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:81.22:0,81,1366	1/1:1,6:7:18.03:412,18,0	0/0:18,0:18:18.59:0,19,609	0/0:23,0:23:45.63:0,46,549	0/0:27,0:27:60.17:0,60,1028	0/0:32,0:32:84.29:0,84,1470	0/0:25,0:25:57.16:0,57,984	1/1:5,24:31:87.13:1834,87,0	0/0:25,0:25:75.20:0,75,1261	0/0:27,0:27:65.93:0,66,1098	0/0:16,0:16:39.11:0,39,644	0/0:33,0:33:90.31:0,90,1611	0/0:32,0:32:87.27:0,87,1497	0/0:37,0:37:93.32:0,93,1659	0/0:49,0:48:99:0,141,2507	0/0:48,0:48:99:0,132,2343	1/1:11,22:33:69.22:1707,69,0	0/0:29,0:29:72.23:0,72,1251	0/0:27,0:27:72.22:0,72,1219	0/0:23,0:23:60.16:0,60,985	0/0:70,0:70:99:0,181,3217	1/1:10,10:21:36.09:770,36,0	1/1:5,12:20:48.16:1132,48,0	1/1:1,24:26:51.18:1325,51,0	0/0:24,0:24:66.23:0,66,1176	0/0:26,0:26:60.15:0,60,1007	0/0:19,0:19:42.14:0,42,753	0/0:14,0:14:30.10:0,30,539
chr10	61922273	.	ATGTGTGTGTGTG	A	1292.76	PASS	AB=0.907;AC=24;AF=0.522;AN=46;BaseQRankSum=1.872;DP=491;FS=3.594;HRun=0;HaplotypeScore=154.4928;InbreedingCoeff=0.2428;MQ=60.15;MQ0=27;MQRankSum=-1.662;QD=4.44;ReadPosRankSum=-0.035;VQSLOD=2.8016;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:29:79.21:79,0,153	0/0:9,0:9:6.02:0,6,134	0/0:19,0:12:0.89:0,1,2	./.	0/1:7,0:10:8.75:9,0,19	0/1:16,0:14:5.96:113,0,6	1/1:26,0:23:2.19:50,2,0	0/0:24,0:24:3.01:0,3,42	./.	1/1:22,1:22:2.97:101,3,0	./.	1/1:15,3:18:3.01:100,3,0	1/1:14,2:16:3.01:100,3,0	1/1:9,2:13:9.03:273,9,0	./.	1/1:14,2:17:0.36:1,0,0	0/0:29,0:28:24.29:0,24,647	0/0:19,0:18:11.84:0,12,140	0/0:20,0:19:0.89:0,1,2	0/1:9,4:13:0:0,0,0	1/1:39,0:38:3.01:34,3,0	0/0:8,0:7:3.01:0,3,45	0/1:9,0:10:0:0,0,0	0/1:29,0:26:31.36:33,0,31	0/0:9,0:9:3.01:0,3,69	1/1:10,2:7:6.02:146,6,0	1/1:10,3:13:12.04:384,12,0	./.
chr10	61923818	.	C	CTAGT	5606.78	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-12.189;DP=737;FS=8.247;HRun=0;HaplotypeScore=112.9691;InbreedingCoeff=0.9642;MQ=68.85;MQ0=0;MQRankSum=1.204;QD=34.61;ReadPosRankSum=1.987;VQSLOD=4.8107;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,117,1881	1/1:3,11:14:31.31:673,31,0	0/0:30,0:28:45.03:0,45,564	0/0:26,0:26:32.46:0,32,505	0/0:25,0:25:33.08:0,33,483	0/0:15,0:15:42.14:0,42,679	0/0:33,0:33:72.23:0,72,1134	1/1:11,14:26:45.13:806,45,0	0/0:20,0:20:39.12:0,39,610	0/0:25,0:25:60.18:0,60,906	0/0:16,0:16:36.09:0,36,540	0/0:23,0:23:45.14:0,45,707	0/0:21,0:21:33.07:0,33,489	0/0:32,0:32:63.13:0,63,961	0/0:31,0:31:72.23:0,72,1141	0/0:25,0:25:57.17:0,57,877	1/1:12,28:41:45.15:1097,45,0	0/0:23,0:23:45.03:0,45,650	0/0:16,0:16:33.11:0,33,538	0/0:21,0:21:54.17:0,54,851	0/0:44,0:44:93.25:0,93,1407	1/1:6,19:26:51.17:1202,51,0	1/1:12,12:24:21.07:512,21,0	1/1:7,22:28:54.19:1317,54,0	0/0:22,0:22:60.19:0,60,952	0/0:38,0:38:99:0,99,1591	0/0:35,0:35:57.18:0,57,901	0/0:4,0:4:3.01:0,3,49
chr10	61925675	.	G	GGTGTGT	3696.95	PASS	AB=1.000;AC=38;AF=0.760;AN=50;BaseQRankSum=-1.622;DP=604;FS=18.040;HRun=0;HaplotypeScore=176.1668;InbreedingCoeff=0.5864;MQ=55.43;MQ0=15;MQRankSum=-2.412;QD=8.60;ReadPosRankSum=-0.767;VQSLOD=1.4908;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:15,7:26:6.02:132,6,0	0/0:7,0:7:3.90:0,4,45	./.	./.	0/0:8,5:14:2.98:0,3,59	1/1:17,0:17:8.66:180,9,0	1/1:27,0:26:5.56:121,6,0	0/0:24,0:28:10.86:0,11,173	./.	1/1:23,0:21:24.08:541,24,0	0/0:10,0:10:0:0,0,1	1/1:27,0:27:14.71:279,15,0	1/1:16,0:16:12.93:248,13,0	1/1:24,0:25:6:168,6,0	1/1:18,2:19:9.02:171,9,0	1/1:16,3:21:9.03:207,9,0	0/0:10,0:29:33.06:0,33,426	1/1:12,3:30:10.17:385,10,0	1/1:14,0:9:4.57:74,5,0	0/1:7,0:7:0:0,0,0	0/1:61,0:55:0:0,0,1	1/1:12,0:13:14.18:163,14,0	1/1:13,0:13:5.03:48,5,0	1/1:14,0:16:9.02:124,9,0	1/1:15,0:15:9.03:194,9,0	1/1:18,0:18:20.07:300,20,0	1/1:18,0:19:14.06:220,14,0	1/1:14,0:12:6.41:140,6,0
chr10	61925716	.	GCGCGCGCGCA	G	2435.66	PASS	AB=0.963;AC=20;AF=0.385;AN=52;BaseQRankSum=-0.843;DP=406;FS=14.456;HRun=0;HaplotypeScore=148.7362;InbreedingCoeff=0.1416;MQ=53.64;MQ0=5;MQRankSum=-0.271;QD=10.59;ReadPosRankSum=-0.557;VQSLOD=1.9731;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:33.11:0,33,1427	0/0:5,0:5:12.04:0,12,209	0/0:4,0:3:2.47:0,2,89	0/1:6,0:5:3.63:4,0,30	0/0:15,0:15:21.75:0,22,887	0/1:24,0:22:0:0,0,0	1/1:16,0:15:9.39:146,9,0	0/0:11,0:11:20.38:0,20,222	0/0:9,0:9:8.77:0,9,212	0/1:13,0:11:99:144,0,150	1/1:13,0:13:7.41:93,7,0	1/1:22,0:21:15.71:281,16,0	1/1:10,0:9:6.90:106,7,0	0/1:18,0:18:14.87:279,0,15	0/1:12,0:12:39.65:82,0,40	0/1:13,0:13:42.46:160,0,42	0/0:35,0:35:42.17:0,42,1287	0/0:27,0:27:45.14:0,45,1775	0/1:7,10:13:3.65:363,0,4	./.	1/1:30,0:28:5.80:103,6,0	0/0:8,0:8:8.54:0,9,109	0/0:11,0:11:2.85:0,3,32	0/0:8,0:8:1.91:0,2,9	0/1:14,0:14:18.09:314,0,18	0/1:15,0:14:99:426,0,143	0/1:7,0:7:58.10:96,0,58	./.
chr10	61925720	.	GCGCGCA	G	3720.85	PASS	AB=0.901;AC=34;AF=0.630;AN=54;BaseQRankSum=0.783;DP=406;FS=24.093;HRun=0;HaplotypeScore=132.1895;InbreedingCoeff=0.5502;MQ=62.26;MQ0=3;MQRankSum=-1.346;QD=13.78;ReadPosRankSum=0.155;VQSLOD=1.2510;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:35.96:0,36,934	0/0:5,0:5:9.50:0,10,139	0/0:6,0:6:8.40:0,8,102	0/1:8,0:8:13.21:13,0,44	0/0:15,0:15:27.62:0,28,620	0/1:8,15:22:0:0,0,0	1/1:12,7:18:20.69:222,21,0	0/1:11,0:11:34.91:35,0,143	0/1:12,0:12:43.70:44,0,47	1/1:13,1:12:25.27:329,25,0	1/1:14,2:16:14.97:237,15,0	1/1:19,4:22:21.06:386,21,0	1/1:8,1:8:9.03:163,9,0	1/1:16,3:19:17.62:316,18,0	1/1:9,2:11:6.02:112,6,0	1/1:12,0:12:2.94:197,3,0	0/0:36,0:36:27.74:0,28,779	0/0:24,0:24:51.07:0,51,1149	1/1:14,0:11:29.83:349,30,0	1/1:4,3:7:2.97:20,3,0	1/1:23,4:26:8.63:117,9,0	0/0:7,0:7:6:0,6,52	0/0:9,0:9:3:0,3,27	1/1:9,0:9:0.47:1,0,0	1/1:12,1:13:24.54:452,25,0	1/1:15,1:15:40.33:590,40,0	1/1:6,1:7:4.34:138,4,0	./.
chr10	61925721	.	C	CGT	1507.61	PASS	AB=0.989;AC=25;AF=0.463;AN=54;BaseQRankSum=-0.745;DP=409;FS=19.595;HRun=0;HaplotypeScore=125.6690;InbreedingCoeff=0.0149;MQ=63.33;MQ0=3;MQRankSum=-2.053;QD=5.23;ReadPosRankSum=-2.560;VQSLOD=1.0958;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:36.01:0,36,429	1/1:4,0:4:7.40:102,7,0	0/0:7,0:7:8.83:0,9,66	0/0:8,0:8:2.77:0,3,20	0/0:17,0:17:29.10:0,29,328	0/1:22,0:21:0:0,0,0	1/1:20,0:19:16:118,16,0	1/1:12,0:12:25.54:253,26,0	0/0:12,0:12:17.57:0,18,148	0/1:14,0:12:12.18:12,0,34	0/1:16,0:16:14.25:14,0,22	0/1:23,0:22:4.94:5,0,48	0/0:10,0:9:4.39:0,4,18	0/1:18,0:18:33.94:34,0,37	0/1:11,0:11:15.78:18,0,16	0/1:12,0:12:26.10:36,0,26	1/1:36,0:36:77.84:861,78,0	0/0:24,0:24:46.74:0,47,383	0/1:14,0:11:11.56:54,0,12	1/1:7,0:7:3:25,3,0	0/1:28,0:27:5.51:35,0,6	0/1:5,1:6:8.92:23,0,9	0/0:5,3:9:2.59:0,3,10	1/1:1,8:9:2.71:15,3,0	0/1:13,0:13:9.12:9,0,38	0/1:16,0:15:40.68:41,0,98	0/1:7,0:7:9.16:16,0,9	./.
chr10	61925724	.	GCA	G	2820.74	PASS	AB=0.955;AC=43;AF=0.796;AN=54;BaseQRankSum=5.516;DP=422;FS=11.629;HRun=0;HaplotypeScore=123.6115;InbreedingCoeff=0.7646;MQ=67.26;MQ0=3;MQRankSum=-3.244;QD=8.71;ReadPosRankSum=0.727;VQSLOD=2.5507;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:32:40.99:0,41,507	1/1:4,0:4:5.23:26,5,0	0/0:9,0:9:17.76:0,18,149	0/0:9,0:9:2.25:0,2,59	0/0:18,0:18:33.31:0,33,374	0/1:20,1:21:0:0,0,0	1/1:18,1:19:20.58:148,21,0	1/1:10,0:10:9.56:85,10,0	1/1:11,0:11:17.80:120,18,0	1/1:14,0:13:32.55:237,33,0	1/1:20,0:20:26.44:241,26,0	1/1:23,0:22:23.97:210,24,0	1/1:10,0:9:8.80:82,9,0	1/1:20,0:20:23.41:170,23,0	1/1:12,0:12:11.56:86,12,0	1/1:14,0:14:18.77:123,19,0	1/1:39,0:39:32.57:443,33,0	0/0:25,0:25:50.96:0,51,607	1/1:12,0:11:29.75:218,30,0	1/1:7,0:7:5.76:33,6,0	1/1:28,0:27:14.13:95,14,0	1/1:5,0:5:7.75:42,8,0	1/1:8,0:8:1.55:4,2,0	1/1:9,1:10:5.89:37,6,0	1/1:13,1:14:23.65:221,24,0	1/1:14,1:15:24.41:263,24,0	1/1:8,0:8:14.11:101,14,0	./.
chr10	61925981	.	AAAC	A	3059.77	PASS	AB=0.996;AC=25;AF=0.446;AN=56;BaseQRankSum=-7.255;DP=510;FS=0.825;HRun=0;HaplotypeScore=110.6293;InbreedingCoeff=0.1856;MQ=88.51;MQ0=5;MQRankSum=-2.386;QD=11.17;ReadPosRankSum=-3.635;VQSLOD=2.8229;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:66.12:0,66,1168	1/1:0,6:6:18.02:245,18,0	0/0:44,0:25:15.81:0,16,572	0/0:58,0:32:28.68:0,29,661	0/0:28,0:28:84.16:0,84,1401	0/0:17,0:17:25.11:0,25,143	0/0:8,0:8:12.43:0,12,42	1/1:2,36:38:99:1388,110,0	0/0:14,0:14:11.46:0,11,75	0/1:23,0:23:52.19:52,0,54	0/1:17,0:17:99:117,0,121	0/0:16,0:16:4.29:0,4,133	0/1:14,0:14:53.52:54,0,74	0/1:14,0:14:9.14:52,0,9	1/1:5,5:10:18.90:139,19,0	0/1:16,0:16:44.19:44,0,68	1/1:3,14:17:35.97:495,36,0	0/0:15,0:15:45.15:0,45,950	0/1:16,0:15:39.43:70,0,39	0/1:19,0:19:12.12:54,0,12	0/1:11,0:11:42.15:42,0,73	1/1:3,2:5:13.07:134,13,0	1/1:4,4:8:10.47:246,10,0	1/1:0,2:2:6.02:91,6,0	0/1:13,0:13:15.13:15,0,41	0/1:21,1:22:3.84:4,0,120	0/1:23,0:23:7.65:8,0,39	0/0:11,0:10:8.87:0,9,46
chr10	61925982	.	AAC	A	4402.98	PASS	AB=0.948;AC=42;AF=0.750;AN=56;BaseQRankSum=4.665;DP=511;FS=4.210;HRun=0;HaplotypeScore=98.9953;InbreedingCoeff=0.5407;MQ=90.63;MQ0=5;MQRankSum=-1.949;QD=12.91;ReadPosRankSum=3.793;VQSLOD=4.2740;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:61.64:0,62,856	1/1:6,0:6:17.91:135,18,0	0/0:47,1:27:29.76:0,30,465	0/0:56,0:32:25.13:0,25,519	0/0:28,0:28:83.33:0,83,1070	0/1:17,0:17:23.65:51,0,24	1/1:8,0:8:14.14:58,14,0	1/1:36,2:38:99:916,111,0	1/1:13,1:14:11.28:107,11,0	1/1:23,0:23:50.70:302,51,0	0/1:16,1:17:18.18:199,0,18	0/1:17,0:17:30.05:119,0,30	1/1:13,1:14:6.08:131,6,0	1/1:11,1:12:29.81:177,30,0	1/1:5,5:10:21.03:241,21,0	1/1:17,0:17:24.48:195,24,0	1/1:17,0:17:35.74:281,36,0	0/0:15,0:15:45.15:0,45,739	1/1:14,2:15:19.20:226,19,0	1/1:19,0:19:44.87:231,45,0	0/1:9,2:11:26.63:131,0,27	1/1:5,0:5:14.98:125,15,0	1/1:7,0:8:5.99:136,6,0	1/1:2,0:2:5.99:47,6,0	1/1:13,0:13:14.56:102,15,0	1/1:23,0:23:4.62:183,5,0	1/1:22,0:23:47.19:189,47,0	1/1:10,1:10:23.89:120,24,0
chr10	61925983	.	AC	A	8173.41	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=1.611;DP=504;FS=11.350;HRun=2;HaplotypeScore=76.6565;InbreedingCoeff=0.9651;MQ=90.49;MQ0=4;MQRankSum=-3.434;QD=24.33;ReadPosRankSum=1.271;VQSLOD=3.5065;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:24.51:0,25,550	1/1:6,0:6:17.59:106,18,0	0/0:44,0:26:23.32:0,23,332	0/0:53,1:31:38.22:0,38,338	0/0:27,1:28:57.52:0,58,733	1/1:3,13:16:23.64:302,24,0	1/1:0,8:8:21.05:252,21,0	1/1:38,0:38:99:699,109,0	1/1:2,12:14:26.11:323,26,0	1/1:1,21:23:67.23:745,67,0	1/1:10,6:16:21.70:361,22,0	1/1:8,7:15:32.95:400,33,0	1/1:9,5:14:34.09:310,34,0	1/1:6,7:13:35.87:377,36,0	1/1:10,0:10:20.59:126,21,0	1/1:6,11:17:44.08:521,44,0	1/1:17,0:17:35.18:210,35,0	0/0:16,0:16:48.05:0,48,541	1/1:2,13:15:44.90:452,45,0	1/1:0,18:19:49.41:487,49,0	1/1:9,2:11:26.88:247,27,0	1/1:6,0:6:17.63:126,18,0	1/1:8,0:8:20.44:131,20,0	1/1:2,0:2:5.88:36,6,0	1/1:5,8:13:31.75:345,32,0	1/1:3,19:22:57.05:636,57,0	1/1:1,22:23:53.70:658,54,0	1/1:1,9:9:27.02:323,27,0
chr10	61927436	.	TA	T	3233.06	PASS	AB=0.792;AC=46;AF=0.821;AN=56;BaseQRankSum=3.026;DP=366;FS=6.275;HRun=15;HaplotypeScore=45.9644;InbreedingCoeff=0.4401;MQ=60.76;MQ0=4;MQRankSum=-0.975;QD=9.26;ReadPosRankSum=0.620;VQSLOD=2.6992;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:11,20:31:37.18:354,37,0	1/1:3,0:3:2.90:17,3,0	0/1:20,0:8:2.03:2,0,15	0/1:11,0:3:7.17:13,0,7	1/1:3,6:10:19.74:121,20,0	1/1:5,13:18:29.46:192,29,0	1/1:6,5:11:8.70:57,9,0	1/1:6,16:22:44.78:288,45,0	1/1:2,9:11:26.59:173,27,0	1/1:3,7:10:20.63:132,21,0	0/1:2,6:9:6.63:82,0,7	1/1:6,6:13:16.77:102,17,0	1/1:2,6:8:17.73:115,18,0	1/1:3,6:9:11.72:77,12,0	1/1:3,6:9:1.60:96,2,0	1/1:5,7:11:14.74:95,15,0	1/1:5,21:26:49.63:326,50,0	1/1:7,10:17:3.68:115,4,0	1/1:9,11:21:33.47:201,33,0	1/1:2,4:6:11.80:77,12,0	1/1:0,3:3:8.87:58,9,0	0/0:2,0:2:6:0,6,53	0/0:5,0:5:12:0,12,105	0/0:10,0:10:12:0,12,106	1/1:3,8:11:20.64:135,21,0	1/1:7,9:19:8.93:155,9,0	0/1:7,12:20:8.70:177,0,9	1/1:7,11:18:35.34:227,35,0
chr10	61927695	.	AGAGG	A	3931.13	PASS	AC=42;AF=0.840;AN=50;BaseQRankSum=2.938;DP=243;FS=0.000;HRun=0;HaplotypeScore=45.7419;InbreedingCoeff=0.6173;MQ=64.79;MQ0=1;MQRankSum=-0.049;QD=19.75;ReadPosRankSum=3.593;VQSLOD=2.9539;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:13:24.08:0,24,584	./.	0/0:8,0:5:6.02:0,6,106	0/0:13,0:11:10.33:0,10,133	./.	1/1:6,6:12:12.04:198,12,0	1/1:5,7:12:15.05:247,15,0	1/1:10,8:18:18.03:268,18,0	0/0:3,0:3:9.03:0,9,204	1/1:6,7:13:18.06:297,18,0	1/1:2,5:7:3.01:49,3,0	1/1:3,11:14:19.31:344,19,0	1/1:3,9:12:24.08:395,24,0	1/1:6,7:13:18.06:297,18,0	1/1:3,3:6:3.01:50,3,0	1/1:4,5:8:14.72:247,15,0	1/1:6,5:11:18.06:296,18,0	./.	1/1:1,2:3:5.98:69,6,0	1/1:3,4:7:3.01:48,3,0	1/1:5,9:13:6.02:98,6,0	1/1:1,2:3:3.01:50,3,0	1/1:2,4:6:2.97:20,3,0	1/1:1,5:6:15.05:246,15,0	1/1:3,4:7:6.02:98,6,0	1/1:6,6:12:18.04:271,18,0	1/1:3,6:9:15.05:243,15,0	1/1:1,4:5:6.02:99,6,0
chr10	61928439	.	TAC	T	961.82	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-5.993;DP=804;FS=4.356;HRun=0;HaplotypeScore=154.0874;InbreedingCoeff=0.8292;MQ=57.53;MQ0=12;MQRankSum=0.856;QD=16.58;ReadPosRankSum=1.446;VQSLOD=3.7983;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:44,1:45:5.19:0,5,808	0/0:5,0:13:24:0,24,218	0/0:45,0:17:5.75:0,6,59	0/0:40,0:18:11.23:0,11,97	0/0:29,0:29:20.57:0,21,647	0/0:10,0:32:19.85:0,20,165	0/0:12,0:32:32.03:0,32,268	0/0:29,0:30:20.98:0,21,286	1/1:8,19:28:45.37:596,45,0	0/0:6,0:21:29.83:0,30,209	0/0:2,0:18:27.36:0,27,185	0/0:10,0:31:43.93:0,44,362	0/0:4,0:18:29.95:0,30,254	0/0:7,0:32:26.99:0,27,234	0/0:13,0:38:53.46:0,53,439	0/0:7,1:35:7.64:0,8,305	0/0:10,0:27:36.45:0,36,316	1/1:11,19:30:41.95:487,42,0	0/0:18,0:20:29.47:0,29,293	0/0:3,0:23:38.96:0,39,308	0/0:13,0:53:51.13:0,51,509	0/0:3,0:25:52.10:0,52,489	0/0:4,0:14:20.99:0,21,183	0/0:17,0:34:37.83:0,38,358	0/0:10,0:30:42.47:0,42,384	0/0:9,0:19:26.51:0,27,223	0/0:7,0:17:14.75:0,15,144	0/0:2,0:23:36:0,36,323
chr10	61928734	.	T	TA	4755.09	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-12.198;DP=656;FS=14.687;HRun=5;HaplotypeScore=63.3102;InbreedingCoeff=0.9996;MQ=70.85;MQ0=0;MQRankSum=0.444;QD=36.58;ReadPosRankSum=-1.194;VQSLOD=2.8666;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,114,1225	1/1:0,15:15:42.14:552,42,0	0/0:20,0:19:25.90:0,26,339	0/0:19,0:19:32.52:0,33,398	0/0:19,0:19:57.14:0,57,612	0/0:34,0:34:93.23:0,93,998	0/0:16,0:16:48.12:0,48,515	1/1:2,35:37:99:1342,102,0	0/0:19,0:19:54.13:0,54,579	0/0:33,0:33:87.21:0,87,929	0/0:18,0:18:48.12:0,48,513	0/0:20,0:20:57.14:0,57,613	0/0:22,0:22:63.12:0,63,659	0/0:19,0:19:54.14:0,54,580	0/0:37,0:37:99:0,99,1064	0/0:25,0:24:72.16:0,72,759	1/1:0,23:23:63.20:829,63,0	0/0:19,0:19:48.12:0,48,515	0/0:26,0:26:69.17:0,69,742	0/0:23,0:23:63.16:0,63,677	0/0:20,0:20:57.14:0,57,613	1/1:1,13:14:42.09:531,42,0	1/1:0,16:16:45.15:592,45,0	1/1:1,24:25:69.22:908,69,0	0/0:20,0:20:60.15:0,60,645	0/0:32,0:32:93.23:0,93,1000	0/0:28,0:28:78.20:0,78,837	0/0:12,0:12:36.09:0,36,386
chr10	61929907	.	AGT	A	13592.11	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-10.708;DP=712;FS=0.409;HRun=0;HaplotypeScore=101.3922;InbreedingCoeff=0.9681;MQ=71.28;MQ0=5;MQRankSum=-3.094;QD=24.80;ReadPosRankSum=1.907;VQSLOD=5.8127;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:44:75:0,75,690	1/1:3,4:7:12.04:145,12,0	0/0:32,1:25:43.36:0,43,615	0/0:29,0:25:12.51:0,13,575	0/0:5,0:25:56.99:0,57,502	1/1:9,14:23:36.11:434,36,0	1/1:13,9:22:11.10:307,11,0	1/1:15,21:36:66.17:763,66,0	1/1:6,25:31:66.20:796,66,0	1/1:9,24:32:75.23:905,75,0	1/1:4,22:27:63.02:735,63,0	1/1:2,18:20:48.15:579,48,0	1/1:6,19:25:54.16:652,54,0	1/1:3,18:22:59.97:701,60,0	1/1:5,24:30:60.01:702,60,0	1/1:7,21:28:57.17:688,57,0	1/1:5,24:29:69.04:810,69,0	0/0:6,0:31:66:0,66,594	1/1:7,6:14:20.90:231,21,0	1/1:4,14:18:42.13:507,42,0	1/1:5,33:38:90.28:1086,90,0	1/1:5,15:20:21.54:583,22,0	1/1:5,10:15:30.09:362,30,0	1/1:4,15:18:36.11:434,36,0	1/1:7,12:19:27.08:326,27,0	1/1:5,19:24:11.76:602,12,0	1/1:7,22:29:63.19:760,63,0	1/1:3,14:18:41.96:484,42,0
chr10	61934559	.	T	TTGGGCC	595.05	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-2.609;DP=559;FS=1.401;HRun=0;HaplotypeScore=117.5178;InbreedingCoeff=0.6578;MQ=69.42;MQ0=0;MQRankSum=-4.790;QD=27.05;ReadPosRankSum=-0.871;VQSLOD=3.4733;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:75.24:0,75,1497	0/0:6,0:6:6.02:0,6,125	0/0:6,0:5:6.01:0,6,96	0/0:12,0:12:2.09:0,2,130	0/0:18,0:18:42.11:0,42,775	0/0:15,0:15:39.11:0,39,721	0/0:27,0:27:42.13:0,42,800	0/0:19,0:19:24.06:0,24,403	1/1:10,8:22:21.07:687,21,0	0/0:10,0:10:15.05:0,15,312	0/0:10,0:10:27.09:0,27,562	0/0:28,0:28:57.20:0,57,1165	0/0:14,0:14:21.07:0,21,437	0/0:33,0:33:63.17:0,63,1230	0/0:22,0:22:48.16:0,48,977	0/0:20,0:20:33.10:0,33,650	0/0:33,0:33:75.26:0,75,1547	0/0:31,0:31:66.20:0,66,1307	0/0:11,0:11:15.05:0,15,304	0/0:10,0:10:18.05:0,18,337	0/0:57,0:57:96.33:0,96,1980	0/0:11,0:11:24.08:0,24,494	0/0:7,0:7:12.04:0,12,245	0/0:30,0:30:72.23:0,72,1445	0/0:24,0:24:39.13:0,39,812	0/0:18,0:18:33.11:0,33,687	0/0:20,0:20:36.12:0,36,748	0/0:11,0:11:21.07:0,21,437
chr10	61936266	.	CG	C	14669.26	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=8.795;DP=662;FS=3.226;HRun=4;HaplotypeScore=70.0952;InbreedingCoeff=0.9993;MQ=89.03;MQ0=0;MQRankSum=-4.227;QD=31.75;ReadPosRankSum=4.795;VQSLOD=5.3085;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,108,1442	1/1:1,15:16:36.11:432,36,0	0/0:29,0:29:81.24:0,81,1083	0/0:22,0:22:54.18:0,54,730	0/0:21,0:21:54.16:0,54,718	1/1:2,14:16:42.13:504,42,0	1/1:1,19:20:51.16:612,51,0	1/1:1,18:19:54.11:620,54,0	1/1:1,26:27:78.24:936,78,0	1/1:2,22:24:60.18:719,60,0	1/1:2,11:13:27.08:324,27,0	1/1:0,22:22:60.18:718,60,0	1/1:3,18:21:48.15:574,48,0	1/1:1,21:22:63.19:756,63,0	1/1:1,36:37:99:1188,99,0	1/1:0,42:42:99:1476,123,0	1/1:1,23:24:69.21:828,69,0	0/0:23,0:23:66.22:0,66,924	1/1:0,17:17:48.15:576,48,0	1/1:1,16:17:41.72:503,42,0	1/1:2,38:40:99:1187,99,0	0/0:23,0:23:63.20:0,63,861	0/0:13,0:13:27.06:0,27,329	0/0:30,0:30:90.30:0,90,1256	1/1:1,16:17:39.12:467,39,0	1/1:2,27:29:81.24:960,81,0	1/1:2,29:31:84.26:1004,84,0	1/1:0,8:8:24.07:288,24,0
chr10	61937330	.	T	TCAGAGAACTTGAAGAAGGAAGAAG	1078.21	PASS	AB=0.750;AC=28;AF=0.933;AN=30;BaseQRankSum=-2.594;DP=44;FS=16.561;HRun=0;HaplotypeScore=33.9979;InbreedingCoeff=-0.2526;MQ=147.64;MQ0=0;MQRankSum=-1.173;QD=29.95;ReadPosRankSum=-1.528;VQSLOD=-0.2853;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/1:2,0:4:13.65:222,0,14	0/1:8,1:10:50.26:395,0,50	./.	./.	./.	1/1:2,0:2:3:27,3,0	1/1:1,0:1:3.01:50,3,0	1/1:2,0:2:5.99:60,6,0	1/1:3,0:4:3:25,3,0	1/1:1,0:1:3.01:50,3,0	1/1:2,0:2:3.01:50,3,0	./.	./.	1/1:2,0:2:3.01:50,3,0	./.	./.	1/1:1,0:1:3.01:42,3,0	./.	./.	1/1:1,0:1:2.99:24,3,0	1/1:1,0:1:3:25,3,0	1/1:1,0:1:2.97:20,3,0	./.	./.	1/1:2,0:3:3.01:104,3,0	1/1:1,0:1:2.98:22,3,0
chr10	61939349	.	ATCC	A	603.16	PASS	AB=0.792;AC=4;AF=0.222;AN=18;BaseQRankSum=0.124;DP=106;FS=17.115;HRun=0;HaplotypeScore=52.9186;MQ=154.86;MQ0=1;MQRankSum=1.507;QD=10.22;ReadPosRankSum=1.114;VQSLOD=1.5280;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	0/0:3,0:3:9.03:0,9,176	0/1:12,8:16:50.69:355,0,51	0/1:22,6:26:99:323,0,137	0/0:3,0:3:3:0,3,25	0/0:4,0:4:5.97:0,6,47	./.	0/0:2,0:2:6.01:0,6,59	./.	./.	0/0:3,0:2:3.01:0,3,35	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	1/1:3,0:3:1.25:3,1,0	./.	0/0:3,0:3:9.02:0,9,99	./.	./.	./.
chr10	61939378	.	AC	A	137.43	PASS	AB=0.777;AC=6;AF=0.214;AN=28;BaseQRankSum=2.992;DP=229;FS=0.000;HRun=1;HaplotypeScore=82.2153;InbreedingCoeff=-0.1014;MQ=134.21;MQ0=6;MQRankSum=-1.065;QD=4.58;ReadPosRankSum=-1.219;VQSLOD=-0.2463;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/0:3,0:3:9.03:0,9,141	0/0:49,0:32:73.41:0,73,1137	0/0:40,0:32:70.38:0,70,1149	0/1:4,2:6:17.93:36,0,18	0/0:5,0:5:6.02:0,6,95	0/0:5,0:4:3.01:0,3,44	0/0:16,0:8:3.01:0,3,48	./.	0/0:10,0:9:5.85:0,6,91	0/1:8,3:10:72.34:103,0,72	./.	./.	./.	./.	./.	./.	./.	0/0:48,1:37:8.54:0,9,142	./.	./.	1/1:1,1:2:3.01:42,3,0	0/1:5,1:5:26.74:27,0,137	./.	0/1:3,2:5:29.77:30,0,116	0/0:6,0:5:3.01:0,3,48	./.	./.
chr10	61939409	.	CT	C	326.26	PASS	AB=0.860;AC=3;AF=0.150;AN=20;BaseQRankSum=-0.783;DP=158;FS=3.084;HRun=3;HaplotypeScore=101.1878;InbreedingCoeff=-0.1077;MQ=182.22;MQ0=1;MQRankSum=2.711;QD=2.79;ReadPosRankSum=-2.273;VQSLOD=-0.7301;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/1:45,2:38:99:184,0,385	0/1:63,1:46:99:218,0,272	0/0:1,0:1:2.90:0,3,16	0/0:8,0:7:14.01:0,14,66	./.	0/0:14,1:7:2.68:0,3,11	./.	0/1:1,1:2:0:0,0,0	0/0:3,0:2:5.75:0,6,30	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	0/0:1,0:1:2.88:0,3,15	0/0:1,0:1:2.88:0,3,15	0/0:1,0:1:2.88:0,3,15	./.	./.	./.	./.
chr10	61939451	.	GC	G	1153.89	PASS	AB=0.961;AC=26;AF=0.867;AN=30;BaseQRankSum=0.201;DP=254;FS=7.812;HRun=1;HaplotypeScore=66.6731;InbreedingCoeff=0.0766;MQ=83.55;MQ0=12;MQRankSum=-2.360;QD=5.27;ReadPosRankSum=3.084;VQSLOD=0.5427;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/1:52,3:20:36.73:143,0,37	0/1:72,1:28:94.50:198,0,95	./.	1/1:23,0:22:41.62:293,42,0	1/1:7,0:6:8.97:73,9,0	1/1:28,1:23:29.70:202,30,0	./.	1/1:5,0:4:4.48:21,4,0	./.	1/1:2,0:2:5.96:43,6,0	1/1:2,0:2:5.95:42,6,0	1/1:2,0:2:2.98:21,3,0	1/1:7,0:7:14.91:109,15,0	1/1:3,0:3:2.98:21,3,0	./.	./.	0/0:19,0:12:6.02:0,6,74	1/1:2,0:2:5.98:50,6,0	1/1:4,0:4:2.98:21,3,0	1/1:2,0:2:2.96:19,3,0	./.	./.	./.	./.	./.	./.
chr10	61939452	.	CT	C	2187.82	PASS	AB=0.848;AC=26;AF=0.867;AN=30;BaseQRankSum=-0.768;DP=233;FS=4.102;HRun=1;HaplotypeScore=66.8455;InbreedingCoeff=0.0758;MQ=87.02;MQ0=10;MQRankSum=-2.652;QD=10.37;ReadPosRankSum=2.224;VQSLOD=1.7181;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/1:52,7:20:31.95:225,0,32	0/1:57,19:29:68.16:304,0,68	./.	1/1:0,22:21:45.09:563,45,0	1/1:0,6:6:9.03:116,9,0	1/1:20,1:21:41.95:440,42,0	./.	1/1:0,4:3:5.97:58,6,0	./.	1/1:0,2:2:6.02:78,6,0	1/1:0,2:2:6.02:78,6,0	1/1:0,2:2:3.01:39,3,0	1/1:0,6:6:15.05:194,15,0	1/1:0,3:3:3.01:39,3,0	./.	./.	0/0:9,5:10:5.98:0,6,47	1/1:0,2:2:6.02:81,6,0	1/1:0,4:4:3.01:39,3,0	1/1:0,0:1:3.01:36,3,0	./.	./.	./.	./.	./.	./.
chr10	61939587	.	AT	A	1607.89	PASS	AB=0.798;AC=30;AF=0.682;AN=44;BaseQRankSum=0.067;DP=360;FS=0.656;HRun=2;HaplotypeScore=100.0306;InbreedingCoeff=0.1709;MQ=91.50;MQ0=27;MQRankSum=-5.529;QD=9.74;ReadPosRankSum=2.555;VQSLOD=1.6268;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:7,4:11:35.75:69,0,36	0/1:5,1:6:23.86:24,0,134	0/0:75,0:30:66.21:0,66,836	0/0:64,0:22:41.34:0,41,497	1/1:0,1:1:3.01:39,3,0	0/1:31,5:33:99:134,0,613	0/1:23,4:23:99:119,0,299	0/0:31,4:17:20.69:0,21,188	1/1:4,7:10:18.06:233,18,0	1/1:1,1:2:3.01:37,3,0	1/1:0,1:1:3.01:39,3,0	0/1:1,2:3:15.87:69,0,16	1/1:0,1:1:3.01:39,3,0	1/1:2,2:4:6.02:77,6,0	1/1:0,6:6:18.06:233,18,0	1/1:0,1:1:3.01:39,3,0	1/1:2,6:8:15.05:194,15,0	0/1:23,5:27:99:105,0,532	0/0:18,0:14:11.98:0,12,133	./.	./.	./.	./.	1/1:2,3:5:3.01:39,3,0	1/1:1,6:7:15.05:194,15,0	1/1:5,2:6:6.02:78,6,0	./.	./.
chr10	61945047	.	G	GT	1576.70	PASS	AB=0.962;AC=7;AF=0.125;AN=56;BaseQRankSum=-2.723;DP=635;FS=2.341;HRun=10;HaplotypeScore=70.4861;InbreedingCoeff=0.8317;MQ=64.97;MQ0=1;MQRankSum=-1.312;QD=14.87;ReadPosRankSum=-0.450;VQSLOD=3.9066;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,30:35:50.54:741,51,0	0/0:6,0:6:11.96:0,12,96	0/0:10,0:10:18.86:0,19,131	0/0:11,0:11:19.05:0,19,129	1/1:8,22:29:51.10:530,51,0	0/0:31,0:31:68.35:0,68,548	0/0:24,0:25:64.76:0,65,506	0/0:27,0:27:47.92:0,48,392	0/0:16,0:17:43.99:0,44,351	0/0:29,0:30:67.51:0,68,531	0/0:18,2:21:18.01:0,18,343	0/0:24,0:24:53.91:0,54,443	0/0:18,0:18:41.92:0,42,338	0/0:32,0:32:80.88:0,81,665	0/0:20,0:20:47.92:0,48,393	0/0:22,0:24:30.28:0,30,442	0/0:29,0:32:77.76:0,78,603	1/1:2,14:16:42.11:447,42,0	0/0:16,0:17:42.18:0,42,320	0/0:27,0:27:58.94:0,59,474	0/0:12,0:12:20.94:0,21,170	0/1:24,1:25:0.81:1,0,345	0/0:19,0:19:44.93:0,45,369	0/0:19,0:19:41.91:0,42,341	0/0:27,0:29:69.97:0,70,554	0/0:24,2:26:2.15:0,2,425	0/0:28,1:31:56.91:0,57,654	0/0:20,0:20:44.89:0,45,369
chr10	61949573	.	CT	C	2959	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.998;DP=754;FS=2.046;HRun=2;HaplotypeScore=71.3698;InbreedingCoeff=0.9636;MQ=89.64;MQ0=0;MQRankSum=-4.168;QD=36.09;ReadPosRankSum=3.577;VQSLOD=4.3834;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,117,1828	0/0:12,0:12:36.12:0,36,576	0/0:27,0:27:81.23:0,81,1234	0/0:29,0:29:87.29:0,87,1325	0/0:31,0:31:93.30:0,93,1458	0/0:31,0:31:93.32:0,93,1487	0/0:43,0:43:99:0,129,1978	0/0:33,0:32:99:0,99,1562	0/0:26,0:26:78.27:0,78,1247	0/0:26,0:26:78.27:0,78,1241	0/0:19,0:19:57.18:0,57,888	0/0:31,0:31:93.32:0,93,1483	0/0:23,0:23:69.24:0,69,1103	0/0:25,0:25:75.24:0,75,1176	0/0:32,0:32:96.33:0,96,1531	0/0:30,0:30:90.30:0,90,1415	0/0:41,0:41:99:0,117,1809	0/0:21,0:21:63.15:0,63,952	0/0:11,0:11:33.11:0,33,508	0/0:19,0:19:57.18:0,57,888	0/0:40,0:40:99:0,117,1859	1/1:0,25:25:69.23:964,69,0	1/1:0,17:17:51.17:711,51,0	1/1:0,40:40:99:1426,102,0	0/0:24,0:24:66.23:0,66,1053	0/0:28,0:28:81.27:0,81,1273	0/0:29,0:29:87.27:0,87,1341	0/0:2,0:2:6.02:0,6,96
chr10	61950238	.	TG	T	18668.44	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=8.109;DP=712;FS=4.606;HRun=2;HaplotypeScore=77.2941;InbreedingCoeff=0.9967;MQ=72.55;MQ0=2;MQRankSum=-1.199;QD=34.13;ReadPosRankSum=2.681;VQSLOD=5.3577;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:94.60:0,95,1495	1/1:0,14:14:33.08:428,33,0	0/0:21,1:21:53.26:0,53,692	0/0:30,0:23:41.77:0,42,573	0/0:34,0:34:99:0,102,1482	1/1:0,24:24:72.23:934,72,0	1/1:1,20:21:34.25:606,34,0	1/1:2,47:49:99:1671,141,0	0/0:14,0:14:39.13:0,39,582	1/1:1,33:34:99:1254,99,0	1/1:1,28:29:75.12:916,75,0	1/1:1,21:22:63.20:812,63,0	1/1:1,20:21:48.16:623,48,0	1/1:0,18:18:54.17:696,54,0	1/1:2,27:29:78.25:1012,78,0	1/1:0,29:29:78.25:1013,78,0	1/1:1,35:36:99:1279,99,0	0/0:30,0:30:90.26:0,90,1304	1/1:1,5:6:15.04:181,15,0	1/1:1,32:33:93.12:1146,93,0	1/1:0,18:18:45.15:584,45,0	1/1:0,22:22:63.20:816,63,0	1/1:0,22:22:51.11:642,51,0	1/1:0,21:21:51.17:662,51,0	1/1:0,32:32:87.28:1129,87,0	1/1:1,19:20:57.15:710,57,0	1/1:1,29:30:75.24:973,75,0	1/1:0,17:17:45.15:584,45,0
chr10	61950907	.	AC	A	6793.27	PASS	AB=1.000;AC=34;AF=0.607;AN=56;BaseQRankSum=5.820;DP=549;FS=11.409;HRun=11;HaplotypeScore=91.1355;InbreedingCoeff=0.7869;MQ=73.68;MQ0=0;MQRankSum=-2.739;QD=17.97;ReadPosRankSum=6.283;VQSLOD=4.5143;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:18.71:0,19,140	0/0:3,0:3:5.97:0,6,45	0/0:17,0:17:34.19:0,34,290	0/0:16,0:16:20.90:0,21,241	0/0:13,0:13:3.88:0,4,26	1/1:8,19:27:68.87:563,69,0	1/1:4,20:24:50.93:418,51,0	0/0:20,0:20:24.52:0,25,249	0/0:19,0:19:5.49:0,5,247	1/1:0,17:17:47.73:393,48,0	1/1:1,7:8:14.88:115,15,0	1/1:4,22:26:65.88:541,66,0	1/1:4,28:32:77.87:640,78,0	1/1:5,18:23:53.93:442,54,0	1/1:7,39:46:98.79:813,99,0	1/1:4,24:28:65.92:542,66,0	0/0:20,1:21:20.33:0,20,374	0/0:12,0:12:15.09:0,15,96	1/1:6,11:17:35.94:295,36,0	1/1:3,7:10:20.94:172,21,0	1/1:2,18:20:53.93:442,54,0	0/1:17,0:17:0.33:0,0,183	0/1:11,0:11:16.40:16,0,82	0/0:24,2:26:1.83:0,2,404	1/1:4,15:19:47.91:393,48,0	1/1:7,16:23:50.93:418,51,0	1/1:4,23:27:62.88:517,63,0	1/1:0,3:3:8.99:74,9,0
chr10	61952227	.	CCTT	C	948.15	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.462;DP=691;FS=4.138;HRun=0;HaplotypeScore=96.4476;InbreedingCoeff=0.9978;MQ=85.88;MQ0=0;MQRankSum=-1.560;QD=39.51;ReadPosRankSum=2.164;VQSLOD=5.0001;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,150,3273	0/0:13,0:13:36.12:0,36,789	0/0:27,0:28:51.12:0,51,1321	0/0:17,0:17:48.14:0,48,982	0/0:19,0:19:54.19:0,54,1219	0/0:32,0:32:84.29:0,84,1901	0/0:24,0:24:72.18:0,72,1422	0/0:31,0:31:90.30:0,90,1962	1/1:2,22:24:63.22:1043,63,0	0/0:26,0:26:75.24:0,75,1620	0/0:9,0:9:27.09:0,27,591	0/0:29,0:29:81.26:0,81,1774	0/0:19,0:19:57.18:0,57,1242	0/0:20,0:20:60.21:0,60,1336	0/0:34,0:34:99:0,99,2226	0/0:25,0:25:72.23:0,72,1547	0/0:33,0:33:93.28:0,93,1996	0/0:23,0:23:66.20:0,66,1445	0/0:26,0:26:72.23:0,72,1534	0/0:21,0:21:63.22:0,63,1408	0/0:34,0:34:99:0,99,2176	0/0:23,0:23:60.18:0,60,1214	0/0:18,0:18:51.16:0,51,1111	0/0:26,0:26:72.20:0,72,1541	0/0:26,0:26:69.24:0,69,1562	0/0:24,0:24:69.22:0,69,1466	0/0:27,0:27:75.22:0,75,1576	0/0:9,0:9:27.09:0,27,590
chr10	61953194	.	CTTTATAA	C	29228.60	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=2.340;DP=618;FS=6.064;HRun=0;HaplotypeScore=161.3087;InbreedingCoeff=0.8647;MQ=76.82;MQ0=0;MQRankSum=-8.975;QD=50.74;ReadPosRankSum=6.318;VQSLOD=3.6634;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,25:26:60.21:1447,60,0	1/1:0,7:7:15.05:368,15,0	0/0:22,0:22:45.15:0,45,1408	0/0:20,0:20:38.41:0,38,1251	1/1:2,24:26:60.16:1354,60,0	1/1:1,24:25:51.18:1238,51,0	1/1:4,16:20:39.13:933,39,0	1/1:13,24:37:72.25:1734,72,0	1/1:1,17:18:33.11:809,33,0	1/1:7,25:32:78.27:1883,78,0	1/1:2,13:15:36.12:882,36,0	1/1:4,29:33:69.24:1691,69,0	1/1:6,33:39:78.27:1911,78,0	1/1:4,22:26:51.18:1250,51,0	1/1:2,34:36:93.32:2272,93,0	1/1:4,27:31:72.25:1762,72,0	1/1:2,7:9:9.03:221,9,0	1/1:4,12:16:27.09:641,27,0	1/1:6,12:18:36.07:749,36,0	1/1:3,15:18:45.15:1086,45,0	1/1:5,3:8:3.01:74,3,0	1/1:3,22:25:60.21:1445,60,0	1/1:6,19:25:39.98:1024,40,0	1/1:2,8:10:12.04:277,12,0	1/1:1,15:16:38.87:952,39,0	1/1:5,16:21:48.16:1176,48,0	1/1:3,28:32:69.24:1683,69,0	1/1:2,5:7:15.05:368,15,0
chr10	61955438	.	TAA	T	6250.19	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=14.257;DP=752;FS=2.450;HRun=3;HaplotypeScore=89.6492;InbreedingCoeff=0.9999;MQ=79.39;MQ0=1;MQRankSum=-1.475;QD=43.71;ReadPosRankSum=0.151;VQSLOD=4.3130;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,108,2047	1/1:0,16:16:45.15:689,45,0	0/0:12,0:12:36.09:0,36,557	0/0:24,0:24:57.07:0,57,998	0/0:22,0:22:66.23:0,66,1275	0/0:30,0:30:90.31:0,90,1732	0/0:27,0:27:81.28:0,81,1557	1/1:0,29:29:87.27:1290,87,0	0/0:31,0:31:93.28:0,93,1717	0/0:34,0:34:99:0,102,1906	0/0:20,0:20:60.21:0,60,1159	0/0:32,0:32:96.33:0,96,1855	0/0:21,0:21:63.22:0,63,1217	0/0:21,0:21:57.18:0,57,1068	0/0:35,0:35:99:0,102,1940	0/0:37,0:37:99:0,111,2082	1/1:0,29:29:81.28:1240,81,0	0/0:30,0:30:87.26:0,87,1643	0/0:21,0:21:60.18:0,60,1062	0/0:27,0:27:81.27:0,81,1528	0/0:33,0:33:99:0,99,1882	1/1:0,13:12:36.12:551,36,0	1/1:0,21:21:63.21:965,63,0	1/1:0,35:35:99:1516,99,0	0/0:23,0:23:69.24:0,69,1327	0/0:49,0:49:99:0,147,2768	0/0:32,0:32:96.33:0,96,1850	0/0:12,0:12:36.12:0,36,695
chr10	61955584	.	CT	C	833.17	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.907;DP=840;FS=4.836;HRun=3;HaplotypeScore=85.8388;InbreedingCoeff=0.9999;MQ=91.55;MQ0=0;MQRankSum=-2.819;QD=29.76;ReadPosRankSum=2.617;VQSLOD=3.4099;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,117,1665	0/0:12,0:12:36.12:0,36,518	0/0:37,0:37:99:0,99,1465	0/0:31,0:31:82.48:0,82,1125	0/0:36,0:36:99:0,105,1491	0/0:30,0:30:87.28:0,87,1234	0/0:27,0:27:81.27:0,81,1166	0/0:31,0:31:90.26:0,90,1229	1/1:0,28:28:75.24:928,75,0	0/0:28,0:28:75.24:0,75,1053	0/0:21,0:21:63.21:0,63,883	0/0:29,0:29:84.28:0,84,1205	0/0:24,0:24:72.23:0,72,1013	0/0:27,0:27:81.27:0,81,1161	0/0:43,0:43:99:0,129,1823	0/0:33,1:34:62.11:0,62,1308	0/0:32,0:32:90.29:0,90,1274	0/0:28,0:28:81.27:0,81,1166	0/0:25,0:25:72.24:0,72,1036	0/0:30,0:30:84.27:0,84,1188	0/0:52,0:52:99:0,153,2127	0/0:20,0:20:60.18:0,60,829	0/0:23,0:23:69.23:0,69,993	0/0:45,0:45:99:0,129,1831	0/0:24,0:24:72.23:0,72,1014	0/0:32,0:32:93.31:0,93,1340	0/0:31,0:31:84.27:0,84,1179	0/0:19,0:19:51.17:0,51,734
chr10	61960167	.	T	TC	323.86	PASS	AB=1.000;AC=4;AF=0.071;AN=56;BaseQRankSum=0.145;DP=646;FS=0.868;HRun=0;HaplotypeScore=101.4311;InbreedingCoeff=0.4817;MQ=61.10;MQ0=46;MQRankSum=0.195;QD=3.37;ReadPosRankSum=0.747;VQSLOD=3.0997;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,111,1102	0/0:9,0:9:23.96:0,24,272	0/1:48,0:12:12.70:13,0,130	0/1:25,0:5:6.08:6,0,8	0/0:35,0:35:86.49:0,86,814	0/0:15,0:16:32.81:0,33,336	0/0:22,0:22:39.05:0,39,410	0/0:23,0:22:51.85:0,52,590	1/1:3,19:23:38.94:413,39,0	0/0:24,0:22:54.48:0,54,552	0/0:17,0:18:32.73:0,33,312	0/0:21,0:21:44.19:0,44,442	0/0:17,0:18:35.61:0,36,327	0/0:20,0:20:35.72:0,36,344	0/0:16,0:16:2.93:0,3,191	0/0:14,0:16:38.53:0,39,349	0/0:34,0:34:97.71:0,98,1121	0/0:16,0:15:35.26:0,35,365	0/0:22,0:20:59.64:0,60,537	0/0:26,0:27:65.40:0,65,603	0/0:8,0:9:17.78:0,18,169	0/0:29,0:32:85:0,85,700	0/0:22,0:22:56.28:0,56,577	0/0:20,0:17:50.32:0,50,539	0/0:22,0:23:50.83:0,51,528	0/0:32,0:31:88.50:0,89,858	0/0:17,0:17:27.53:0,28,284	0/0:8,0:7:17.77:0,18,174
chr10	61960168	.	TC	T	6259.09	PASS	AB=0.878;AC=39;AF=0.696;AN=56;BaseQRankSum=-7.560;DP=633;FS=5.554;HRun=5;HaplotypeScore=76.7387;InbreedingCoeff=0.4590;MQ=60.42;MQ0=47;MQRankSum=2.135;QD=12.06;ReadPosRankSum=-2.509;VQSLOD=2.6146;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:39,6:45:26.34:181,0,26	0/0:8,0:8:21:0,21,222	0/1:46,0:11:0.01:0,0,102	0/0:26,0:5:2.22:0,2,8	0/1:32,2:34:0.56:253,0,1	1/1:3,13:16:27.01:287,27,0	1/1:3,19:22:27.35:306,27,0	0/0:22,0:21:29.83:0,30,459	0/0:24,0:25:49.05:0,49,286	1/1:3,19:20:47.63:453,48,0	1/1:2,16:18:26.07:265,26,0	1/1:6,16:21:29.93:306,30,0	1/1:5,13:18:24:255,24,0	1/1:3,17:19:26.93:265,27,0	0/1:1,14:15:6.02:165,0,6	1/1:4,10:14:26.21:270,26,0	0/0:32,0:33:66.37:0,66,828	0/1:15,1:15:44.31:58,0,44	1/1:4,18:20:53.47:487,53,0	1/1:5,23:27:62.21:530,62,0	1/1:1,8:9:17.98:187,18,0	1/1:29,2:31:24.28:329,24,0	0/1:19,2:21:19.27:120,0,19	0/1:18,1:17:33.22:52,0,33	1/1:5,18:23:39.02:422,39,0	1/1:17,15:30:72.19:714,72,0	1/1:2,15:17:20.90:236,21,0	1/1:5,4:7:11.97:119,12,0
chr10	61961966	.	C	CTT	9003.28	PASS	AB=0.688;AC=51;AF=0.911;AN=56;BaseQRankSum=-3.544;DP=549;FS=23.886;HRun=11;HaplotypeScore=76.4580;InbreedingCoeff=0.6728;MQ=68.84;MQ0=4;MQRankSum=-2.638;QD=17.35;ReadPosRankSum=2.527;VQSLOD=1.9098;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:23:32.97:119,33,0	1/1:0,0:7:8.73:29,9,0	0/0:19,0:17:8.82:0,9,153	0/0:9,0:6:8.67:0,9,59	1/1:4,0:26:16.20:117,16,0	1/1:5,16:22:45.15:637,45,0	1/1:1,5:9:23.56:283,24,0	1/1:11,0:46:80.35:326,80,0	1/1:8,1:21:21.04:207,21,0	1/1:5,18:22:53.58:660,54,0	1/1:5,19:25:44.34:538,44,0	1/1:3,9:13:24.08:339,24,0	1/1:9,10:20:43.06:517,43,0	1/1:6,9:16:9.90:410,10,0	1/1:7,12:19:24.04:324,24,0	1/1:3,11:11:18.06:261,18,0	1/1:6,1:34:29.82:184,30,0	1/1:2,0:12:19.96:69,20,0	1/1:6,6:12:24.07:329,24,0	1/1:7,22:31:63.13:853,63,0	1/1:2,11:14:21.07:305,21,0	0/1:6,0:11:13.15:38,0,13	1/1:2,0:12:20.37:76,20,0	1/1:1,0:15:22.46:77,22,0	1/1:2,20:23:32.60:443,33,0	1/1:5,19:24:51.14:714,51,0	1/1:2,23:26:45.14:620,45,0	1/1:3,14:18:38.62:530,39,0
chr10	61963520	.	CT	C	634.65	PASS	AB=0.931;AC=24;AF=0.429;AN=56;BaseQRankSum=-3.230;DP=503;FS=1.037;HRun=16;HaplotypeScore=82.0588;InbreedingCoeff=0.2213;MQ=69.40;MQ0=5;MQRankSum=0.352;QD=2.39;ReadPosRankSum=0.771;VQSLOD=-0.4715;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:10,2:12:15.09:15,0,97	1/1:0,2:5:12:54,12,0	0/0:48,0:14:3.53:0,4,65	0/0:46,2:22:17.41:0,17,92	0/0:18,2:20:18.08:0,18,210	0/0:14,2:16:5.68:0,6,138	0/1:15,0:15:17.09:17,0,42	1/1:18,5:24:15.47:90,15,0	1/1:1,0:12:18.30:53,18,0	0/1:18,0:18:21.34:32,0,21	0/0:25,3:28:10.35:0,10,141	0/0:15,0:15:10.77:0,11,80	0/0:8,0:8:11.14:0,11,45	0/1:16,0:16:16.59:17,0,79	0/0:13,0:13:22.13:0,22,98	0/1:8,1:9:3.93:4,0,37	1/1:3,11:15:22.59:131,23,0	0/0:16,0:16:18.23:0,18,168	0/1:18,0:18:15.26:15,0,53	0/1:23,0:23:32.96:33,0,49	0/0:5,0:5:4.99:0,5,18	1/1:3,6:10:13.72:78,14,0	1/1:7,11:19:17.51:109,18,0	1/1:1,7:9:19.68:114,20,0	0/1:12,6:19:17.09:17,0,69	0/0:20,0:20:13.58:0,14,106	0/1:28,1:29:36.87:37,0,187	0/1:10,2:12:8.45:8,0,77
chr10	61963536	.	T	TA	2779.70	PASS	AB=0.950;AC=31;AF=0.554;AN=56;BaseQRankSum=-3.413;DP=475;FS=11.070;HRun=2;HaplotypeScore=81.7856;InbreedingCoeff=0.7842;MQ=76.48;MQ0=5;MQRankSum=2.535;QD=9.36;ReadPosRankSum=0.345;VQSLOD=0.1760;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:18.96:0,19,201	0/0:10,0:10:29.73:0,30,222	0/1:46,0:16:4.42:4,0,106	0/0:37,0:21:0.24:0,0,149	0/0:18,0:18:43.56:0,44,422	1/1:15,2:17:25.54:193,26,0	1/1:14,1:15:32.23:196,32,0	0/0:14,0:14:35.48:0,35,256	0/0:13,0:13:31.51:0,32,194	1/1:11,0:11:23.47:148,23,0	1/1:27,0:27:61.26:363,61,0	1/1:11,0:11:19.69:129,20,0	1/1:6,0:6:14.88:69,15,0	1/1:16,1:17:25.09:188,25,0	1/1:16,0:16:35.50:192,35,0	1/1:6,0:6:12.90:70,13,0	0/0:18,0:18:41.40:0,41,274	0/0:14,0:14:35.91:0,36,347	1/1:20,0:20:49.92:365,50,0	1/1:15,1:16:33.08:233,33,0	1/1:3,0:3:7.99:44,8,0	0/0:14,0:14:35.62:0,36,266	0/0:18,0:19:38.33:0,38,266	0/0:10,0:10:23.62:0,24,149	1/1:20,0:20:20.40:195,20,0	1/1:18,1:19:30.21:220,30,0	0/1:30,2:32:2.49:251,0,2	0/1:12,1:13:7.33:132,0,7
chr10	61963978	.	G	GA	15432.78	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=-17.737;DP=721;FS=20.896;HRun=2;HaplotypeScore=62.9350;InbreedingCoeff=0.9976;MQ=91.75;MQ0=0;MQRankSum=-5.240;QD=38.87;ReadPosRankSum=5.274;VQSLOD=2.8197;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:84.22:0,84,1012	0/0:9,0:9:27.08:0,27,335	0/0:23,0:23:65.47:0,65,738	0/0:37,0:37:87.19:0,87,1025	0/0:26,0:26:75.22:0,75,915	1/1:1,23:24:63.21:907,63,0	1/1:1,22:23:60.20:864,60,0	0/0:38,0:38:99:0,108,1320	0/0:40,0:40:99:0,117,1426	1/1:1,27:29:84.25:1165,84,0	1/1:2,18:20:54.14:749,54,0	1/1:0,29:29:75.25:1080,75,0	1/1:0,27:27:75.25:1079,75,0	1/1:1,28:29:69.23:993,69,0	1/1:1,26:27:72.24:1036,72,0	1/1:0,29:29:78.26:1123,78,0	0/0:28,0:28:81.18:0,81,971	0/0:18,0:18:51.13:0,51,615	1/1:0,12:12:36.12:518,36,0	1/1:2,33:35:96.32:1377,96,0	1/1:2,17:19:45.15:648,45,0	0/0:34,0:34:96.23:0,96,1156	0/0:25,0:25:75.24:0,75,929	0/0:16,0:16:48.14:0,48,584	1/1:0,19:19:51.17:734,51,0	1/1:0,42:42:99:1776,126,0	1/1:0,28:28:81.27:1166,81,0	1/1:0,5:5:15.05:216,15,0
chr10	61964659	.	TAAC	T	508.43	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.309;DP=460;FS=0.000;HRun=0;HaplotypeScore=65.4840;InbreedingCoeff=0.9330;MQ=75.49;MQ0=0;MQRankSum=-2.496;QD=36.32;ReadPosRankSum=1.628;VQSLOD=3.9000;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:87.30:0,87,1814	0/0:4,0:4:9.03:0,9,172	0/0:14,0:14:30.09:0,30,478	0/0:16,0:16:28.84:0,29,517	0/0:18,0:18:51.18:0,51,1089	0/0:17,0:16:48.16:0,48,999	0/0:9,0:9:21.07:0,21,448	0/0:28,0:28:75.25:0,75,1538	1/1:0,14:14:39.13:603,39,0	0/0:21,0:21:57.18:0,57,1119	0/0:13,0:13:39.13:0,39,832	0/0:12,0:12:33.11:0,33,692	0/0:28,0:28:78.27:0,78,1643	0/0:17,0:17:48.15:0,48,969	0/0:15,0:15:42.14:0,42,877	0/0:17,0:17:48.15:0,48,973	0/0:20,0:20:54.18:0,54,1089	0/0:21,0:21:48.16:0,48,999	0/0:25,0:25:63.18:0,63,1223	0/0:21,0:21:60.18:0,60,1178	0/0:7,0:7:21.07:0,21,449	0/0:11,0:11:27.08:0,27,518	0/0:10,0:10:27.09:0,27,564	0/0:9,0:9:27.09:0,27,577	0/0:9,0:9:27.08:0,27,538	0/0:23,0:23:63.20:0,63,1309	0/0:18,0:18:51.17:0,51,1087	0/0:14,0:14:42.14:0,42,881
chr10	61964761	.	CAG	C	692.99	PASS	AB=0.924;AC=14;AF=0.250;AN=56;BaseQRankSum=-5.672;DP=405;FS=1.574;HRun=0;HaplotypeScore=78.2256;InbreedingCoeff=-0.3597;MQ=69.88;MQ0=9;MQRankSum=0.980;QD=4.08;ReadPosRankSum=0.189;VQSLOD=2.3864;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:32.11:0,32,348	0/0:6,0:6:12.01:0,12,114	0/0:29,0:14:8.68:0,9,153	0/0:32,0:18:14.71:0,15,149	0/0:17,0:17:10.56:0,11,280	0/1:9,4:13:99:131,0,137	0/1:15,0:15:36.14:36,0,196	0/0:22,0:22:39.06:0,39,459	0/0:23,0:22:44.04:0,44,425	0/1:2,1:3:26.81:27,0,34	0/1:10,0:10:3.71:4,0,123	0/1:4,1:5:23.77:24,0,55	0/1:13,2:15:74.33:74,0,164	0/1:9,1:9:52.34:77,0,52	0/1:7,1:8:42.45:42,0,77	0/1:6,0:6:30.39:30,0,84	0/0:20,0:19:23.97:0,24,221	0/0:16,0:16:30.08:0,30,329	0/1:20,0:20:67.01:67,0,149	0/0:11,0:11:2.31:0,2,194	0/1:17,2:17:96.66:97,0,121	0/0:2,0:2:6.01:0,6,60	0/0:13,0:13:20.43:0,20,154	0/0:8,0:11:5.99:0,6,49	0/0:9,0:9:5.99:0,6,51	0/1:17,0:17:9.28:9,0,217	0/1:15,0:15:35.02:35,0,163	0/1:14,0:14:19.31:189,0,19
chr10	61964782	.	A	AGTGT	3715.96	PASS	AB=1.000;AC=24;AF=0.429;AN=56;BaseQRankSum=-6.407;DP=422;FS=33.133;HRun=0;HaplotypeScore=90.0336;InbreedingCoeff=0.6108;MQ=60.84;MQ0=8;MQRankSum=-1.232;QD=18.67;ReadPosRankSum=-0.158;VQSLOD=1.2411;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,18:23:27.09:640,27,0	1/1:1,0:5:11.35:106,11,0	0/0:29,0:16:26.76:0,27,275	0/0:29,0:18:29.60:0,30,442	1/1:5,9:14:12.04:301,12,0	0/0:13,0:13:32.20:0,32,294	0/0:15,0:15:27.21:0,27,312	1/1:4,0:28:27.94:307,28,0	1/1:6,16:21:39.12:888,39,0	0/1:6,0:5:17.35:17,0,59	0/0:9,0:9:17.12:0,17,196	0/0:6,0:6:12.71:0,13,92	0/0:16,0:16:1.04:0,1,203	0/0:13,0:12:8.24:0,8,102	0/0:8,0:8:14.42:0,14,126	0/1:9,0:9:7.68:8,0,127	1/1:5,0:18:17.80:301,18,0	1/1:2,13:17:26.88:617,27,0	0/1:21,0:21:5.21:5,0,179	0/0:13,0:13:4.26:0,4,255	0/0:25,0:24:13.53:0,14,204	1/1:0,1:5:9.03:171,9,0	1/1:2,0:14:11.91:247,12,0	1/1:11,0:12:6.02:92,6,0	0/1:4,0:4:15.49:15,0,62	0/0:18,0:18:12.23:0,12,311	0/0:18,0:18:19.83:0,20,214	0/0:11,0:11:6.22:0,6,75
chr10	61967200	.	GCACACACA	G	415.06	PASS	AB=1.000;AC=12;AF=0.375;AN=32;BaseQRankSum=1.460;DP=359;FS=3.862;HRun=0;HaplotypeScore=98.9535;InbreedingCoeff=0.4648;MQ=52.81;MQ0=12;MQRankSum=-2.097;QD=3.71;ReadPosRankSum=0.823;VQSLOD=1.6306;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:22,8:29:2.67:74,3,0	./.	./.	./.	1/1:8,4:12:6.02:149,6,0	./.	0/0:22,0:21:1.25:0,1,3	0/0:9,0:8:3.01:0,3,102	0/0:10,0:10:18.06:0,18,304	0/0:14,0:13:5.81:0,6,76	./.	./.	./.	./.	./.	./.	0/0:17,0:17:9.50:0,10,303	1/1:7,4:11:3.01:75,3,0	0/0:15,0:13:3.01:0,3,32	./.	./.	1/1:10,0:14:3.01:56,3,0	1/1:6,0:11:9.03:167,9,0	0/1:23,0:23:0.21:0,0,0	0/1:11,0:11:0:0,0,0	0/0:12,0:11:6.64:0,7,65	0/0:9,0:9:2.58:0,3,61	0/0:9,0:9:0.89:0,1,2
chr10	61967204	.	A	ACGCGCGCGCGCGCG	4851.78	PASS	AB=0.939;AC=26;AF=0.500;AN=52;BaseQRankSum=-2.141;DP=358;FS=30.606;HRun=0;HaplotypeScore=141.0374;InbreedingCoeff=0.3061;MQ=50.40;MQ0=15;MQRankSum=-3.567;QD=23.67;ReadPosRankSum=-1.111;VQSLOD=2.2471;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:36.58:0,37,1151	0/1:8,0:8:31.88:44,0,32	0/0:17,0:4:9.03:0,9,208	0/0:14,0:3:6.49:0,6,259	0/0:13,0:12:21.05:0,21,560	./.	1/1:15,0:26:2.80:110,3,0	0/1:10,0:9:20.26:378,0,20	0/1:10,0:11:8.61:9,0,136	1/1:10,0:18:32.18:1173,32,0	0/0:8,0:8:0:0,0,0	1/1:10,0:10:8.57:361,9,0	1/1:5,0:5:6.02:99,6,0	0/1:10,0:10:95.75:96,0,117	1/1:13,0:12:6.01:75,6,0	1/1:8,0:8:9.02:261,9,0	0/1:17,0:17:56:606,0,56	0/0:11,0:11:24.04:0,24,624	1/1:12,0:10:11.09:717,11,0	./.	0/1:13,0:11:45.16:83,0,45	0/0:11,0:11:15.03:0,15,452	0/0:11,0:11:18.03:0,18,591	0/0:21,0:21:19:0,19,693	0/1:5,0:15:0.92:1,0,124	1/1:6,0:13:16.68:407,17,0	0/1:8,0:8:4.98:152,0,5	1/1:4,0:4:12.04:279,12,0
chr10	61967206	.	A	ACGCGCGCGGGCGCGCGCG	2610.78	PASS	AB=1.000;AC=20;AF=0.385;AN=52;BaseQRankSum=-0.010;DP=279;FS=10.013;HRun=0;HaplotypeScore=119.0315;InbreedingCoeff=0.2356;MQ=49.14;MQ0=16;MQRankSum=-2.133;QD=27.48;ReadPosRankSum=0.113;VQSLOD=1.6133;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:27:33.56:0,34,1288	0/1:4,0:4:19.09:19,0,69	0/0:16,0:3:9.02:0,9,177	0/0:13,0:2:6.02:0,6,257	0/0:12,0:11:15.03:0,15,545	./.	0/0:12,0:11:0.95:0,1,3	0/1:9,0:7:61.97:255,0,62	0/0:12,0:11:20.98:0,21,412	1/1:11,0:10:13.72:745,14,0	0/0:0,1:13:0.47:0,0,1	1/1:3,0:3:6.02:367,6,0	1/1:3,0:3:5.99:49,6,0	0/1:8,0:8:32.07:32,0,148	1/1:6,0:5:3:25,3,0	0/1:2,0:2:0:0,0,0	0/1:14,0:14:99:278,0,160	0/0:11,0:11:21.03:0,21,702	0/1:7,0:5:15.75:222,0,16	./.	0/1:9,0:7:38.58:39,0,51	0/0:10,0:10:12.04:0,12,455	0/0:10,0:10:14.33:0,14,671	0/0:21,0:21:22.45:0,22,817	0/0:13,0:12:3.01:0,3,157	1/1:10,0:9:13:372,13,0	0/1:6,0:6:13.61:118,0,14	1/1:3,0:3:8.86:251,9,0
chr10	61967376	.	G	GA	143.32	PASS	AB=0.919;AC=4;AF=0.071;AN=56;BaseQRankSum=-0.614;DP=472;FS=0.000;HRun=11;HaplotypeScore=50.9675;InbreedingCoeff=0.3046;MQ=64.66;MQ0=6;MQRankSum=0.544;QD=4.09;ReadPosRankSum=-1.741;VQSLOD=-0.3244;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,1:18:11.37:0,11,271	0/0:3,0:4:8.01:0,8,52	0/0:36,0:16:24.31:0,24,183	0/0:25,0:11:12.32:0,12,99	0/0:17,0:17:32.83:0,33,254	0/0:21,0:21:47.75:0,48,368	0/0:18,0:17:38.83:0,39,301	0/0:28,0:28:71.70:0,72,553	1/1:3,8:11:4.04:221,4,0	0/1:14,1:15:0.58:1,0,197	0/0:15,1:16:14.27:0,14,279	0/0:13,0:13:20.87:0,21,160	0/0:10,0:10:23.90:0,24,186	0/0:12,0:12:32.87:0,33,255	0/0:12,1:14:1.40:0,1,178	0/1:8,1:9:6.53:7,0,139	0/0:21,0:24:59.76:0,60,423	0/0:17,0:17:41.83:0,42,322	0/0:14,0:15:40.57:0,41,294	0/0:18,0:18:47.75:0,48,366	0/0:18,0:18:9.37:0,9,249	0/0:15,0:16:31.78:0,32,255	0/0:12,0:11:26.87:0,27,209	0/0:14,1:15:8.40:0,8,246	0/0:11,0:11:20.91:0,21,162	0/0:20,0:21:52.79:0,53,398	0/0:21,0:22:49.75:0,50,371	0/0:14,0:15:43.88:0,44,331
chr10	61967715	.	CAA	C	2500.92	PASS	AB=0.886;AC=41;AF=0.732;AN=56;BaseQRankSum=1.380;DP=406;FS=8.442;HRun=11;HaplotypeScore=90.5098;InbreedingCoeff=0.2209;MQ=66.66;MQ0=6;MQRankSum=-0.359;QD=7.62;ReadPosRankSum=5.682;VQSLOD=0.1874;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:11.18:0,11,54	0/0:3,0:3:0:0,0,0	0/1:54,0:22:8.83:9,0,105	0/0:43,0:21:18.86:0,19,230	0/0:16,0:17:30.22:0,30,178	1/1:14,0:14:23.06:162,23,0	1/1:10,0:10:11.77:81,12,0	1/1:4,0:4:2.99:26,3,0	0/1:2,6:8:25.72:83,0,26	0/1:16,0:16:9.46:150,0,9	1/1:13,0:13:16.51:122,17,0	1/1:9,0:9:14.74:100,15,0	1/1:6,0:6:5.58:44,6,0	1/1:7,0:7:11.80:80,12,0	1/1:20,0:20:35.42:238,35,0	1/1:13,0:13:16.25:108,16,0	1/1:13,0:13:5.55:177,6,0	0/1:5,0:11:9.55:46,0,10	0/1:12,0:12:49.21:62,0,49	1/1:24,0:24:22.57:286,23,0	1/1:4,0:4:2.93:19,3,0	0/1:7,0:7:3.45:46,0,3	1/1:3,8:11:1.36:62,1,0	1/1:6,6:12:5.98:63,6,0	1/1:12,0:12:15.42:116,15,0	1/1:16,0:16:22.51:204,23,0	1/1:20,0:20:27.45:270,27,0	0/1:10,0:10:14.30:108,0,14
chr10	61967725	.	AAG	A	5328.01	PASS	AB=0.933;AC=42;AF=0.808;AN=52;BaseQRankSum=-3.283;DP=362;FS=0.000;HRun=0;HaplotypeScore=79.0990;InbreedingCoeff=0.0254;MQ=71.92;MQ0=7;MQRankSum=0.740;QD=16.81;ReadPosRankSum=2.835;VQSLOD=4.4858;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:11:9.02:71,9,0	./.	0/1:60,0:21:34.94:35,0,68	0/0:41,0:18:4.87:0,5,122	0/1:14,0:14:2.07:2,0,51	1/1:0,12:12:32.91:377,33,0	1/1:1,7:8:17.90:179,18,0	./.	0/1:7,0:7:28.80:37,0,29	1/1:1,12:13:33.07:426,33,0	1/1:0,11:11:23.94:278,24,0	1/1:0,8:8:17.99:220,18,0	1/1:0,5:5:8.96:98,9,0	1/1:0,6:6:12.04:162,12,0	1/1:0,16:16:36.12:485,36,0	1/1:0,12:12:23.93:274,24,0	0/1:11,0:11:29.11:29,0,67	0/1:8,1:9:9.69:35,0,10	0/1:2,7:9:11.48:216,0,11	1/1:3,18:21:46.74:599,47,0	1/1:0,2:2:3.01:41,3,0	1/1:2,0:2:2.84:10,3,0	0/1:10,0:10:11.98:12,0,14	0/1:10,0:10:10.81:11,0,35	1/1:1,13:14:23.93:277,24,0	1/1:0,14:14:42.14:570,42,0	1/1:0,21:21:45.15:598,45,0	1/1:1,10:11:8.92:285,9,0
chr10	61967726	.	AG	A	1838.64	PASS	AB=0.983;AC=36;AF=0.692;AN=52;BaseQRankSum=-1.077;DP=360;FS=16.542;HRun=11;HaplotypeScore=93.2305;InbreedingCoeff=0.5425;MQ=72.07;MQ0=6;MQRankSum=1.997;QD=7.04;ReadPosRankSum=4.065;VQSLOD=0.6993;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:10,0:10:10.71:11,0,18	0/0:1,0:1:2.96:0,3,19	0/1:55,2:21:31.30:31,0,40	0/0:41,0:18:5.13:0,5,77	0/0:6,0:9:1.23:0,1,20	1/1:12,0:12:26.13:144,26,0	1/1:8,0:8:11.61:64,12,0	./.	0/0:7,0:7:8.82:0,9,47	1/1:13,0:13:29.05:162,29,0	1/1:11,0:11:17.41:95,17,0	1/1:8,0:8:14.46:79,14,0	1/1:5,0:5:5.74:31,6,0	1/1:6,0:6:11.61:64,12,0	1/1:16,0:16:34.83:191,35,0	1/1:12,0:12:17.19:92,17,0	0/0:11,0:14:15.55:0,16,77	1/1:10,0:10:0.17:15,0,0	1/1:9,0:9:4.14:83,4,0	1/1:20,1:21:46.49:263,46,0	1/1:2,0:2:2.90:16,3,0	./.	0/0:9,0:10:1.37:0,1,30	0/0:10,0:10:11.43:0,11,61	1/1:14,0:14:17.34:95,17,0	1/1:14,0:14:40.64:226,41,0	1/1:21,0:21:43.16:230,43,0	1/1:10,1:11:20.20:112,20,0
chr10	62028573	.	AT	A	1437.34	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=3.412;DP=400;FS=0.555;HRun=6;HaplotypeScore=53.7429;InbreedingCoeff=0.9208;MQ=77.29;MQ0=0;MQRankSum=-3.205;QD=25.67;ReadPosRankSum=0.210;VQSLOD=3.5982;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:45.11:0,45,547	1/1:0,8:8:15.04:161,15,0	0/0:18,0:12:9.63:0,10,168	0/0:8,0:7:8.19:0,8,121	0/0:25,0:25:66.19:0,66,832	0/0:18,0:17:51.16:0,51,657	0/0:5,0:5:15.05:0,15,196	1/1:1,22:23:66.16:708,66,0	0/0:13,0:13:39.12:0,39,499	0/0:18,0:18:48.13:0,48,595	0/0:20,0:20:60.19:0,60,788	0/0:7,0:7:18.06:0,18,236	0/0:13,0:13:33.09:0,33,418	0/0:8,0:8:21.06:0,21,262	0/0:12,0:12:36.10:0,36,455	0/0:11,0:11:27.07:0,27,328	1/1:1,24:25:66.17:709,66,0	0/0:11,0:11:30.08:0,30,378	0/0:17,0:17:45.10:0,45,517	0/0:10,0:10:27.05:0,27,301	0/0:12,0:12:33.09:0,33,419	0/0:4,0:4:9.02:0,9,103	0/0:17,0:17:42.12:0,42,538	0/0:6,0:6:18.05:0,18,222	0/0:21,0:21:57.17:0,57,726	0/0:24,0:24:60.17:0,60,751	0/0:20,0:20:60.04:0,60,672	0/0:10,0:10:30.10:0,30,393
chr10	62029447	.	T	TAA	6266.31	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-2.931;DP=393;FS=0.000;HRun=11;HaplotypeScore=57.6994;InbreedingCoeff=0.8537;MQ=73.25;MQ0=1;MQRankSum=-1.394;QD=20.48;ReadPosRankSum=0.550;VQSLOD=3.7085;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:75.03:0,75,714	1/1:0,0:5:12.48:43,12,0	0/0:13,0:12:23.58:0,24,206	0/0:11,0:10:8.59:0,9,86	0/0:12,0:13:17.70:0,18,207	1/1:1,16:17:42.14:608,42,0	1/1:0,4:4:8.99:107,9,0	1/1:8,3:27:4.50:177,4,0	1/1:5,7:12:15.05:217,15,0	1/1:2,11:15:38.61:513,39,0	1/1:2,4:10:20.97:227,21,0	1/1:2,11:15:12.04:174,12,0	1/1:1,10:11:21.07:304,21,0	1/1:4,6:11:18.06:246,18,0	1/1:2,11:13:24.08:347,24,0	1/1:4,9:13:15.05:217,15,0	1/1:4,0:25:44.87:154,45,0	0/0:21,0:21:56.80:0,57,533	1/1:5,9:15:4.03:372,4,0	1/1:2,7:11:27:329,27,0	1/1:3,14:17:39.09:541,39,0	1/1:0,0:8:19.96:69,20,0	1/1:3,1:8:12.99:78,13,0	1/1:1,0:7:12.48:43,12,0	1/1:1,4:5:9.03:130,9,0	1/1:9,22:32:66.01:779,66,0	1/1:4,6:10:11.97:157,12,0	1/1:2,10:12:30.10:435,30,0
chr10	62029698	.	G	GA	210.10	PASS	AB=0.556;AC=5;AF=0.093;AN=54;BaseQRankSum=1.348;DP=194;FS=6.120;HRun=7;HaplotypeScore=25.9649;InbreedingCoeff=0.4211;MQ=46.65;MQ0=14;MQRankSum=-1.697;QD=12.36;ReadPosRankSum=-0.180;VQSLOD=0.9290;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,1:4:9.01:95,9,0	0/0:2,0:2:3:0,3,29	./.	0/0:7,0:1:0:0,0,0	0/1:1,4:5:19.95:63,0,20	0/0:6,0:6:6.01:0,6,58	0/0:6,0:5:9.01:0,9,86	0/0:16,0:15:39.02:0,39,371	0/0:6,0:4:5.99:0,6,58	0/0:9,0:8:15.02:0,15,145	0/0:6,0:6:12.02:0,12,116	0/0:9,0:9:24.02:0,24,226	0/0:5,0:4:9.01:0,9,87	0/0:4,0:4:6:0,6,58	0/0:4,0:4:12.02:0,12,116	0/0:8,0:7:12.02:0,12,116	0/0:16,0:13:5.04:0,5,35	1/1:3,5:7:15.03:169,15,0	0/0:12,0:9:27.04:0,27,258	0/0:3,0:3:6.01:0,6,58	0/0:5,0:5:9.01:0,9,87	0/0:2,0:2:6.01:0,6,58	0/0:9,0:9:6.01:0,6,58	0/0:12,0:11:12:0,12,109	0/0:6,0:6:12.01:0,12,111	0/0:11,0:10:24.04:0,24,232	0/0:8,0:7:15.02:0,15,145	0/0:3,0:3:5.98:0,6,50
chr10	62029720	.	A	AAAAAAAT	613.04	PASS	AB=1.000;AC=9;AF=0.167;AN=54;BaseQRankSum=-4.517;DP=197;FS=6.316;HRun=0;HaplotypeScore=42.2651;InbreedingCoeff=0.2878;MQ=57.25;MQ0=13;MQRankSum=-1.197;QD=8.51;ReadPosRankSum=-1.546;VQSLOD=0.3150;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:7:17.07:0,17,169	1/1:2,0:2:3.01:30,3,0	0/1:13,0:1:0:0,0,0	0/0:27,0:10:6.28:0,6,36	0/0:4,0:4:9.03:0,9,103	0/0:7,0:7:8.63:0,9,45	0/0:2,0:1:3.01:0,3,68	1/1:25,0:21:33.55:457,34,0	0/1:4,0:3:6.12:6,0,63	0/0:3,0:2:5.75:0,6,30	0/0:2,0:2:2.22:0,2,7	0/0:5,0:5:3.88:0,4,27	0/0:3,0:3:2.88:0,3,15	0/0:2,0:2:3:0,3,25	0/0:1,0:1:2.88:0,3,15	0/0:7,0:7:5.75:0,6,30	1/1:7,13:19:6:218,6,0	0/0:12,0:12:32.86:0,33,337	0/0:11,0:9:17.39:0,17,99	0/0:2,0:2:5.55:0,6,26	0/0:4,0:3:5.75:0,6,30	./.	0/0:4,0:4:2.66:0,3,47	0/1:7,0:6:26.15:26,0,72	0/0:1,0:1:2.88:0,3,15	0/0:10,0:10:17.73:0,18,79	0/0:5,0:4:2.88:0,3,15	0/0:6,0:5:11.50:0,12,60
chr10	62029727	.	TAAAAAATAAA	T	175.76	PASS	AB=1.000;AC=5;AF=0.093;AN=54;BaseQRankSum=-1.478;DP=195;FS=5.180;HRun=0;HaplotypeScore=49.7404;InbreedingCoeff=0.2512;MQ=57.61;MQ0=12;MQRankSum=-2.496;QD=5.02;ReadPosRankSum=1.067;VQSLOD=0.8198;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:8:24.03:0,24,669	0/0:2,0:2:3.01:0,3,127	0/0:15,0:1:0.47:0,0,1	0/0:30,0:11:17.05:0,17,222	0/0:4,0:4:12.04:0,12,436	0/0:5,0:5:9.03:0,9,348	0/0:2,0:1:3.01:0,3,148	0/1:25,0:22:5.84:6,0,890	0/0:3,0:3:8.98:0,9,240	0/0:2,0:2:6.02:0,6,263	0/0:2,0:2:2.98:0,3,21	0/0:4,0:4:5.92:0,6,41	0/0:3,0:3:3.01:0,3,128	0/0:2,0:2:3:0,3,25	0/0:1,0:1:3.01:0,3,132	0/0:4,0:4:6.02:0,6,261	0/0:21,0:20:9.50:0,10,310	0/0:12,0:12:33.11:0,33,1192	0/0:11,0:8:20.92:0,21,599	0/0:2,0:2:5.69:0,6,142	0/0:5,0:4:6.02:0,6,263	./.	1/1:2,2:4:3.01:90,3,0	1/1:2,4:5:6.02:179,6,0	0/0:1,0:1:3.01:0,3,131	0/0:9,0:9:23.89:0,24,582	0/0:5,0:4:3.01:0,3,104	0/0:6,0:5:12.04:0,12,519
chr10	62029734	.	T	TAA	1830.16	PASS	AB=1.000;AC=39;AF=0.722;AN=54;BaseQRankSum=-3.861;DP=209;FS=12.187;HRun=9;HaplotypeScore=28.1595;InbreedingCoeff=0.4704;MQ=60.11;MQ0=9;MQRankSum=0.819;QD=13.26;ReadPosRankSum=2.465;VQSLOD=-0.1125;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,0:10:17.19:58,17,0	0/0:1,0:1:3.01:0,3,32	1/1:20,0:2:0.47:1,0,0	0/0:30,0:12:4.45:0,4,90	1/1:1,0:6:12.72:79,13,0	1/1:0,5:5:9.03:139,9,0	0/0:2,0:1:3.01:0,3,31	0/0:25,0:22:37.38:0,37,330	0/0:3,0:3:6.02:0,6,64	1/1:0,2:2:6.02:92,6,0	1/1:2,0:2:3.01:45,3,0	1/1:4,0:4:5.98:61,6,0	1/1:1,2:3:3.01:46,3,0	./.	1/1:0,1:1:3.01:46,3,0	1/1:2,3:4:6.02:92,6,0	0/1:22,0:21:35.24:35,0,52	1/1:2,0:14:27.32:94,27,0	1/1:3,9:12:26.73:350,27,0	1/1:0,2:2:6.02:92,6,0	1/1:2,2:3:6.02:92,6,0	1/1:1,0:1:2.97:20,3,0	0/0:3,0:3:2.74:0,3,12	0/0:5,0:5:5.49:0,5,25	1/1:1,3:4:3.01:46,3,0	1/1:1,8:9:24.08:366,24,0	1/1:1,3:4:3.01:46,3,0	1/1:1,6:6:12.04:185,12,0
chr10	62029960	.	A	AG	510.39	PASS	AC=6;AF=0.111;AN=54;BaseQRankSum=1.080;DP=230;FS=0.899;HRun=0;HaplotypeScore=44.2810;InbreedingCoeff=0.6609;MQ=45.78;MQ0=5;MQRankSum=1.080;QD=11.87;ReadPosRankSum=4.585;VQSLOD=3.8309;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,15:21:22.86:234,23,0	0/0:3,0:3:8.60:0,9,62	./.	0/0:9,0:2:5.88:0,6,54	1/1:2,6:8:17.81:157,18,0	0/0:9,0:9:26.98:0,27,275	0/0:16,0:15:32.61:0,33,332	0/0:10,0:10:22.26:0,22,166	0/0:8,0:8:11.91:0,12,84	0/0:7,0:7:10.79:0,11,82	0/0:3,0:3:8.97:0,9,84	0/0:10,0:10:28.93:0,29,222	0/0:1,0:1:2.50:0,2,9	0/0:9,0:9:22.80:0,23,190	0/0:9,0:9:22.69:0,23,242	0/0:2,0:2:5.90:0,6,41	0/0:7,0:7:16.37:0,16,102	1/1:2,12:14:4.32:248,4,0	0/0:12,0:11:27:0,27,272	0/0:5,0:5:8.85:0,9,62	0/0:15,0:15:26.58:0,27,226	0/0:2,0:2:5.92:0,6,39	0/0:3,0:3:6.86:0,7,48	0/0:15,0:15:18.73:0,19,128	0/0:6,0:6:14.91:0,15,141	0/0:7,0:7:17.97:0,18,153	0/0:8,0:8:21.02:0,21,216	0/0:3,0:3:4.51:0,5,23
chr10	62030829	.	C	CT	237.28	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=0.998;DP=560;FS=1.182;HRun=9;HaplotypeScore=61.1759;InbreedingCoeff=0.9100;MQ=56.85;MQ0=0;MQRankSum=-1.007;QD=16.95;ReadPosRankSum=-0.830;VQSLOD=3.5377;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:80.94:0,81,698	0/0:10,0:10:26.99:0,27,234	0/0:5,0:6:11.99:0,12,102	0/0:7,0:6:8.99:0,9,77	0/0:31,0:31:68.26:0,68,598	0/0:22,0:22:53.91:0,54,460	0/0:14,0:14:35.99:0,36,313	0/0:35,0:35:83.95:0,84,723	1/1:4,10:14:30.08:332,30,0	0/0:17,0:17:50.96:0,51,436	0/0:37,0:37:86.75:0,87,736	0/0:11,0:11:23.87:0,24,193	0/0:11,0:11:26.99:0,27,234	0/0:18,0:18:44.97:0,45,390	0/0:25,0:25:65.76:0,66,547	0/0:21,0:21:53.98:0,54,469	0/0:42,0:42:99:0,105,911	0/0:13,0:13:38.99:0,39,339	0/0:13,0:13:32.99:0,33,286	0/0:35,0:35:86.60:0,87,712	0/0:26,0:26:65.96:0,66,568	0/0:23,0:23:41.92:0,42,357	0/0:21,0:21:41.61:0,42,340	0/0:10,0:10:23.98:0,24,204	0/0:18,0:18:25.02:0,25,322	0/0:20,0:20:53.98:0,54,469	0/0:11,0:11:32.99:0,33,286	0/0:17,0:17:50.99:0,51,443
chr10	62030924	.	G	GTTGTTTGT	19966.52	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-1.487;DP=493;FS=17.226;HRun=0;HaplotypeScore=118.2773;InbreedingCoeff=0.8091;MQ=48.83;MQ0=2;MQRankSum=-6.072;QD=45.90;ReadPosRankSum=1.554;VQSLOD=3.1012;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,13:24:18.06:687,18,0	1/1:6,0:6:15.03:516,15,0	0/0:23,0:15:4.33:0,4,96	0/0:35,0:23:41.08:0,41,856	1/1:9,10:19:27.02:961,27,0	1/1:16,0:16:38.89:1157,39,0	1/1:15,0:15:17.15:320,17,0	1/1:43,0:41:62.67:1125,63,0	1/1:14,0:19:37.89:661,38,0	1/1:21,0:19:35.81:1047,36,0	1/1:18,0:18:30.39:819,30,0	1/1:6,0:7:14.88:403,15,0	1/1:12,0:12:29.92:886,30,0	1/1:13,0:13:20.92:425,21,0	1/1:17,0:16:32.78:819,33,0	1/1:14,0:14:17.97:632,18,0	1/1:23,0:23:44.79:804,45,0	1/1:8,7:16:20.99:630,21,0	1/1:18,0:18:26.37:532,26,0	1/1:26,0:26:57.13:2077,57,0	1/1:16,0:16:41.80:886,42,0	1/1:12,0:11:18.04:493,18,0	1/1:16,0:14:24.06:767,24,0	1/1:11,0:11:6.02:246,6,0	1/1:22,0:21:42:1366,42,0	1/1:16,0:16:35.83:893,36,0	1/1:11,0:10:12.04:323,12,0	1/1:4,0:4:12.04:492,12,0
chr10	62030946	.	T	TG	2235.56	PASS	AB=0.799;AC=26;AF=0.464;AN=56;BaseQRankSum=6.284;DP=454;FS=29.713;HRun=0;HaplotypeScore=111.9893;InbreedingCoeff=-0.5181;MQ=43.85;MQ0=2;MQRankSum=-8.155;QD=6.19;ReadPosRankSum=6.535;VQSLOD=1.6996;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:6.41:0,6,282	0/1:4,3:7:20.75:64,0,21	0/0:16,0:6:17.41:0,17,193	0/0:37,0:27:36.86:0,37,821	0/0:14,0:14:6.34:0,6,266	0/1:9,7:16:24.36:148,0,24	0/1:10,2:12:30.97:31,0,54	0/1:36,0:33:99:124,0,145	0/1:17,0:17:93.58:94,0,94	0/1:9,8:15:21.28:154,0,21	0/1:12,5:17:69.78:91,0,70	0/1:8,1:9:42.05:42,0,56	0/1:8,6:14:31.34:141,0,31	0/1:11,2:13:53.81:71,0,54	0/1:9,5:13:16.97:137,0,17	0/1:11,5:15:75.03:75,0,78	0/1:21,4:25:85.75:134,0,86	0/1:12,0:12:5.12:5,0,166	1/1:12,1:13:15.87:138,16,0	0/1:14,15:29:63.34:227,0,63	0/1:11,4:15:46.10:126,0,46	0/0:9,2:10:7.68:0,8,101	0/1:10,7:15:45.98:89,0,46	0/1:7,3:10:23.49:23,0,28	1/1:9,11:19:1.74:234,2,0	0/1:10,6:16:27.80:144,0,28	0/1:8,3:10:32.24:32,0,80	1/1:1,4:5:1.68:68,2,0
chr10	62030947	.	T	TTTGTTTG	14214.80	PASS	AB=0.820;AC=29;AF=0.518;AN=56;BaseQRankSum=7.892;DP=451;FS=31.825;HRun=0;HaplotypeScore=134.6475;InbreedingCoeff=-0.6803;MQ=43.98;MQ0=2;MQRankSum=-3.397;QD=35.45;ReadPosRankSum=3.441;VQSLOD=2.9300;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:14,0:14:99:201,0,336	0/1:4,3:7:46.27:268,0,46	0/0:14,0:6:8.02:0,8,191	0/0:35,0:27:60.05:0,60,1267	0/1:14,0:14:99:381,0,338	0/1:9,7:16:33.88:857,0,34	0/1:10,2:12:60.85:279,0,61	0/1:36,0:33:99:692,0,185	0/1:17,0:17:60.07:637,0,60	0/1:9,8:15:13.67:779,0,14	0/1:12,5:17:78.05:508,0,78	0/1:8,1:9:45.02:305,0,45	1/1:7,6:13:1.18:701,1,0	0/1:11,2:13:37.11:445,0,37	0/1:10,5:14:21.81:585,0,22	0/1:11,5:15:11.27:688,0,11	0/1:21,3:25:99:839,0,117	0/1:12,0:12:89.94:90,0,307	1/1:12,1:13:4.28:366,4,0	0/1:14,15:29:54.11:1463,0,54	0/1:12,4:16:45.10:674,0,45	0/1:9,2:10:55.22:136,0,55	0/1:10,7:15:96.80:527,0,97	0/1:8,2:10:24.41:329,0,24	0/1:8,11:18:19.29:1031,0,19	0/1:10,6:16:4.68:821,0,5	0/1:9,2:11:64.32:229,0,64	1/1:1,4:5:12.51:383,13,0
chr10	62032669	.	A	ACC	5193.83	PASS	AB=1.000;AC=30;AF=0.536;AN=56;BaseQRankSum=-2.303;DP=519;FS=8.596;HRun=4;HaplotypeScore=72.8670;InbreedingCoeff=0.6913;MQ=57.68;MQ0=52;MQRankSum=-0.205;QD=17.97;ReadPosRankSum=-1.057;VQSLOD=1.1514;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:23:54.32:0,54,619	0/0:6,0:6:18.06:0,18,223	0/1:90,0:15:3.29:3,0,140	0/0:92,0:15:4.59:0,5,111	0/0:17,0:17:42.08:0,42,502	1/1:12,0:9:20.94:261,21,0	1/1:10,0:8:20.76:304,21,0	0/0:17,0:16:39.05:0,39,475	0/0:8,0:8:1.69:0,2,121	1/1:17,0:14:31.69:481,32,0	1/1:14,1:15:34.66:306,35,0	1/1:7,0:6:15.05:246,15,0	0/1:6,0:6:8.76:192,0,9	1/1:11,0:10:29.13:440,29,0	0/1:13,0:13:4.47:338,0,4	1/1:9,0:9:19.66:266,20,0	0/0:32,0:30:66.18:0,66,817	0/0:16,0:14:39.09:0,39,481	1/1:20,0:18:38.56:486,39,0	1/1:13,0:12:26.87:330,27,0	1/1:1,4:6:3.01:38,3,0	0/0:3,0:3:9.03:0,9,115	0/0:10,0:8:24.05:0,24,285	0/0:5,0:5:6.01:0,6,69	1/1:17,0:17:46.32:609,46,0	0/1:20,0:17:0.27:433,0,0	1/1:15,0:13:14.39:311,14,0	1/1:8,0:6:15.01:149,15,0
chr10	62032975	.	T	TA	511.24	PASS	AB=0.869;AC=14;AF=0.250;AN=56;BaseQRankSum=-1.194;DP=466;FS=2.274;HRun=15;HaplotypeScore=66.1166;InbreedingCoeff=0.1075;MQ=71.42;MQ0=2;MQRankSum=-0.518;QD=3.04;ReadPosRankSum=-2.150;VQSLOD=-0.4941;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:15,2:18:31.67:32,0,51	1/1:4,3:8:2.37:47,2,0	0/0:20,0:8:2.30:0,2,17	0/1:15,0:13:1.66:2,0,22	0/0:19,2:24:7.24:0,7,140	0/0:25,0:25:34.17:0,34,202	0/0:11,0:11:14.55:0,15,88	0/1:22,6:30:13.58:97,0,14	0/0:20,0:20:11.07:0,11,68	0/0:19,0:18:17.29:0,17,106	0/0:18,0:20:33.27:0,33,189	0/0:13,0:13:11.54:0,12,69	0/1:8,1:12:14.57:15,0,30	0/1:8,1:10:31.52:32,0,43	0/0:19,0:21:28.33:0,28,166	0/0:17,0:18:18.24:0,18,195	0/1:19,2:21:7.99:152,0,8	0/0:9,0:9:8.62:0,9,52	0/0:13,1:19:3.80:0,4,114	0/0:13,0:16:16.54:0,17,93	0/1:7,2:9:20.74:39,0,21	1/1:14,0:14:5.99:48,6,0	0/1:9,6:15:21.04:61,0,21	1/1:4,8:15:5.73:139,6,0	0/0:11,0:11:5.66:0,6,35	0/0:11,0:12:19.59:0,20,114	0/0:25,1:29:25.67:0,26,249	0/0:7,0:11:16.68:0,17,94
chr10	62033216	.	ACT	A	3180.73	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=8.125;DP=451;FS=0.972;HRun=0;HaplotypeScore=54.3623;InbreedingCoeff=0.9876;MQ=58.73;MQ0=4;MQRankSum=-0.167;QD=33.84;ReadPosRankSum=1.305;VQSLOD=5.3498;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:22:60.21:0,60,1113	1/1:0,6:6:18.06:265,18,0	0/0:14,0:12:35.15:0,35,613	0/0:23,0:15:35.92:0,36,620	0/0:13,0:13:32.28:0,32,553	0/0:12,0:12:30.10:0,30,547	0/0:14,0:14:42.14:0,42,779	1/1:1,16:17:42.13:595,42,0	0/0:20,0:20:57.20:0,57,1058	0/0:6,0:6:15.05:0,15,281	0/0:7,0:7:18.06:0,18,337	0/0:12,0:12:36.12:0,36,673	0/0:16,0:16:48.15:0,48,859	0/0:16,0:16:45.15:0,45,834	0/0:35,0:35:99:0,102,1853	0/0:26,0:26:78.27:0,78,1440	1/1:3,37:40:90.30:1320,90,0	0/0:15,0:14:42.14:0,42,786	0/0:15,0:12:36.12:0,36,664	0/0:7,0:7:17.58:0,18,329	0/0:23,0:23:63.19:0,63,1128	1/1:0,6:6:18.06:261,18,0	1/1:2,6:8:18.06:264,18,0	1/1:0,17:17:45.15:663,45,0	0/0:10,0:10:30.10:0,30,556	0/0:14,0:14:42.14:0,42,750	0/0:26,0:26:78.27:0,78,1445	0/0:9,0:9:24.08:0,24,449
chr10	62035530	.	T	TA	156.68	PASS	AB=0.917;AC=3;AF=0.054;AN=56;BaseQRankSum=-1.098;DP=594;FS=2.097;HRun=12;HaplotypeScore=65.9328;InbreedingCoeff=0.5867;MQ=72.76;MQ0=0;MQRankSum=0.614;QD=5.05;ReadPosRankSum=-1.204;VQSLOD=1.5256;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:38.70:0,39,282	0/0:9,0:9:17.28:0,17,117	0/0:27,0:14:26.67:0,27,187	0/0:17,0:13:8.41:0,8,47	0/0:25,0:26:44.51:0,45,319	0/0:22,0:23:58.62:0,59,415	0/0:11,0:12:28.79:0,29,195	0/0:31,0:33:73.26:0,73,507	1/1:5,15:20:7.89:238,8,0	0/0:31,0:31:62.30:0,62,447	0/0:33,0:33:45.27:0,45,343	0/0:15,0:15:38.71:0,39,276	0/0:20,0:20:56.08:0,56,380	0/0:18,0:18:32.45:0,32,227	0/0:23,0:23:47.59:0,48,341	0/0:29,1:30:42.28:0,42,464	0/0:26,0:26:58.83:0,59,410	0/0:18,0:18:24.73:0,25,219	0/1:10,1:11:6.03:6,0,129	0/0:16,0:17:26.83:0,27,232	0/0:14,0:16:25.83:0,26,181	0/0:14,0:14:32.74:0,33,235	0/0:24,0:24:53.51:0,54,378	0/0:12,0:12:26.72:0,27,190	0/0:17,0:17:35.75:0,36,258	0/0:27,1:28:29.70:0,30,367	0/0:40,0:44:99:0,104,713	0/0:7,0:8:19.92:0,20,137
chr10	62039051	.	TA	T	3973.96	PASS	AB=0.738;AC=32;AF=0.571;AN=56;BaseQRankSum=4.451;DP=610;FS=17.228;HRun=14;HaplotypeScore=68.0820;InbreedingCoeff=0.8100;MQ=68.66;MQ0=1;MQRankSum=2.960;QD=10.38;ReadPosRankSum=3.721;VQSLOD=1.4427;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,2:42:60.47:0,60,782	0/0:0,1:10:25.68:0,26,134	0/0:19,0:12:8.62:0,9,55	0/0:11,0:9:8.58:0,9,56	0/0:26,2:28:4.57:0,5,292	1/1:5,16:24:44.77:285,45,0	1/1:4,15:20:3.90:163,4,0	0/0:8,0:22:46.58:0,47,290	0/0:15,0:16:15.29:0,15,269	1/1:5,24:29:69.85:458,70,0	1/1:7,18:26:27.32:308,27,0	0/1:8,17:26:15.12:191,0,15	1/1:6,11:18:28.72:191,29,0	1/1:4,11:16:28.77:189,29,0	1/1:8,12:22:27.71:176,28,0	1/1:3,19:22:50.57:349,51,0	0/0:12,0:24:26.03:0,26,164	0/0:8,0:10:10.94:0,11,146	1/1:8,17:25:47.38:320,47,0	1/1:12,19:31:20.50:256,20,0	1/1:5,8:13:16.08:105,16,0	0/1:19,3:23:2.82:3,0,328	0/0:21,1:23:30.16:0,30,369	0/0:17,3:21:24.44:0,24,360	1/1:2,8:10:14.86:103,15,0	1/1:9,18:27:50.41:345,50,0	1/1:14,22:36:56.12:382,56,0	1/1:7,7:15:22.79:150,23,0
chr10	62039988	.	G	GT	8158.46	PASS	AB=0.593;AC=47;AF=0.839;AN=56;BaseQRankSum=-6.110;DP=459;FS=3.604;HRun=11;HaplotypeScore=50.8094;InbreedingCoeff=0.6931;MQ=70.56;MQ0=1;MQRankSum=-0.032;QD=19.90;ReadPosRankSum=1.232;VQSLOD=5.9589;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:14:26.68:0,27,179	1/1:0,6:6:12.02:122,12,0	1/1:10,0:10:0.48:67,0,0	0/0:5,0:4:5.93:0,6,41	0/0:19,0:22:57.86:0,58,430	1/1:7,18:25:54.08:538,54,0	1/1:1,5:6:15.03:152,15,0	1/1:14,21:35:23.27:567,23,0	1/1:17,0:17:37.84:211,38,0	1/1:9,13:24:24.69:416,25,0	1/1:4,20:26:65.55:608,66,0	1/1:4,16:21:47.88:460,48,0	1/1:2,13:16:36.06:360,36,0	1/1:1,8:9:15.03:152,15,0	1/1:0,18:19:44.92:441,45,0	1/1:3,22:25:37.02:556,37,0	1/1:2,11:14:5.98:274,6,0	0/0:7,0:8:16.94:0,17,118	1/1:3,8:11:0.80:184,1,0	1/1:5,23:28:63.12:639,63,0	1/1:0,3:3:9.02:91,9,0	1/1:0,5:5:12.02:122,12,0	0/1:5,10:16:7.56:280,0,8	1/1:3,10:16:29.56:256,30,0	1/1:2,13:15:15.84:342,16,0	1/1:5,12:18:40.94:382,41,0	1/1:6,30:36:72.13:726,72,0	1/1:1,7:8:21.04:213,21,0
chr10	62039991	.	T	TG	753.67	PASS	AB=0.997;AC=26;AF=0.464;AN=56;BaseQRankSum=6.163;DP=442;FS=0.919;HRun=0;HaplotypeScore=71.2382;InbreedingCoeff=-0.3908;MQ=69.95;MQ0=1;MQRankSum=-0.223;QD=1.95;ReadPosRankSum=8.939;VQSLOD=0.7935;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:36.47:0,36,410	1/1:6,0:6:4.57:13,5,0	0/0:9,0:9:7.08:0,7,107	0/0:5,0:4:11.60:0,12,115	0/0:22,0:22:66.10:0,66,841	0/1:26,0:25:21.64:22,0,95	0/1:6,0:6:4.88:5,0,19	0/1:30,0:30:21.37:21,0,205	1/1:0,17:17:39.13:531,39,0	0/1:20,0:20:16.17:16,0,143	0/1:25,0:25:20.79:21,0,95	0/1:22,0:22:25.22:25,0,56	0/1:16,0:17:35.79:37,0,36	0/1:9,0:9:2.55:3,0,37	0/1:21,0:21:16.39:16,0,43	0/1:25,0:25:22.87:23,0,68	0/1:14,0:14:22.68:23,0,43	0/0:7,0:7:21.01:0,21,251	0/1:9,0:9:3.52:4,0,57	0/1:27,0:27:38.07:38,0,100	1/1:3,0:3:3.74:10,4,0	0/1:5,0:5:6.04:6,0,12	0/1:14,0:14:11.18:11,0,100	0/1:15,0:15:7.95:8,0,80	0/1:14,0:14:17.24:17,0,28	0/1:17,0:17:7.81:8,0,97	0/1:34,0:34:40.18:40,0,59	0/1:10,0:10:13.52:14,0,14
chr10	62041773	.	TCCC	T	11441.56	PASS	AB=0.512;AC=50;AF=0.893;AN=56;BaseQRankSum=-6.165;DP=455;FS=31.892;HRun=5;HaplotypeScore=90.2358;InbreedingCoeff=0.7313;MQ=64.29;MQ0=2;MQRankSum=-1.831;QD=29.87;ReadPosRankSum=6.090;VQSLOD=1.1113;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:1,0:30:0.56:1,0,3	1/1:0,4:4:6.02:100,6,0	0/0:35,1:17:36.02:0,36,505	0/0:35,0:19:38.63:0,39,704	1/1:2,0:15:5.47:26,5,0	1/1:2,17:19:36.12:602,36,0	1/1:0,14:14:42.14:700,42,0	1/1:5,14:19:30.07:470,30,0	1/1:4,12:16:24.08:400,24,0	1/1:2,12:14:33.11:534,33,0	1/1:2,13:15:33.11:551,33,0	1/1:2,17:19:39.13:637,39,0	1/1:3,15:18:36.12:599,36,0	1/1:3,14:17:20.92:351,21,0	1/1:1,13:14:30.06:471,30,0	1/1:0,9:9:21.07:351,21,0	1/1:2,24:26:54.18:902,54,0	0/1:1,0:16:0:1,0,0	1/1:1,13:14:39.13:650,39,0	1/1:2,14:16:36.12:589,36,0	1/1:1,7:8:18.06:301,18,0	1/1:0,2:2:6.02:100,6,0	1/1:0,7:7:21.07:351,21,0	1/1:1,15:16:33.11:552,33,0	1/1:2,15:17:36.12:602,36,0	1/1:1,15:16:42.14:701,42,0	1/1:0,20:20:48.16:802,48,0	1/1:0,2:2:6.02:100,6,0
chr10	62042375	.	TC	T	433.10	PASS	AB=0.957;AC=16;AF=0.286;AN=56;BaseQRankSum=8.141;DP=403;FS=1.750;HRun=1;HaplotypeScore=103.1698;InbreedingCoeff=0.0713;MQ=61.37;MQ0=2;MQRankSum=-6.652;QD=2.27;ReadPosRankSum=5.244;VQSLOD=-0.6267;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:20:27.09:0,27,373	0/0:10,0:10:17.57:0,18,116	0/0:14,1:10:12.82:0,13,187	0/0:16,0:12:26.52:0,27,257	0/0:29,0:29:66.83:0,67,695	0/1:10,1:11:17.18:17,0,34	1/1:10,0:10:3.52:15,4,0	0/0:24,0:24:59.65:0,60,498	0/0:8,0:8:11.89:0,12,166	0/0:13,0:13:22.60:0,23,103	0/1:11,1:12:3:36,0,3	1/1:15,1:16:2.97:14,3,0	0/1:12,0:12:40.93:67,0,41	0/1:11,0:11:23.62:45,0,24	0/1:19,2:21:8.81:80,0,9	0/1:14,0:14:11.63:26,0,12	0/0:19,0:19:27.97:0,28,219	0/0:11,0:11:14.22:0,14,279	0/0:19,1:19:27.04:0,27,234	0/1:15,1:16:16.94:17,0,32	0/0:7,0:7:9.26:0,9,50	0/0:8,0:8:14.40:0,14,158	0/0:9,0:9:17.60:0,18,131	0/0:1,0:1:2.98:0,3,22	0/1:24,1:25:58.12:58,0,83	0/1:10,1:11:39.20:39,0,45	1/1:16,1:17:14.32:127,14,0	0/1:15,0:15:27.98:54,0,28
chr10	62042376	.	CT	C	3778.24	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=-3.823;DP=407;FS=2.025;HRun=12;HaplotypeScore=93.7018;InbreedingCoeff=0.8873;MQ=61.19;MQ0=2;MQRankSum=1.700;QD=16.29;ReadPosRankSum=2.457;VQSLOD=4.4835;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,1:20:14.88:0,15,303	0/0:3,0:10:20.36:0,20,136	0/0:16,0:10:3.04:0,3,76	0/0:15,0:12:8.68:0,9,147	0/0:28,2:30:18.08:0,18,501	1/1:4,7:11:23.56:170,24,0	1/1:1,9:10:20.92:163,21,0	0/0:8,0:25:43.30:0,43,249	0/0:3,0:8:21.93:0,22,145	1/1:3,9:13:28.93:215,29,0	1/1:2,10:12:32.87:254,33,0	1/1:3,13:16:28.94:265,29,0	1/1:6,6:12:12.94:165,13,0	1/1:3,7:11:21.49:149,21,0	1/1:7,14:21:41.42:331,41,0	1/1:3,10:14:40.74:294,41,0	0/0:9,1:21:14.73:0,15,188	0/0:11,0:11:26.22:0,26,257	1/1:10,10:20:4.41:206,4,0	1/1:1,14:16:37.88:284,38,0	1/1:2,5:7:14.93:116,15,0	0/0:2,0:8:22.55:0,23,125	0/0:3,0:10:5.05:0,5,82	0/0:0,0:1:2.84:0,3,14	1/1:7,16:25:52.79:388,53,0	1/1:3,6:10:25.74:180,26,0	1/1:3,14:17:41.47:306,41,0	1/1:5,11:16:14.36:291,14,0
chr10	62042689	.	A	ACC	31761.90	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-8.757;DP=685;FS=1.259;HRun=1;HaplotypeScore=67.4294;InbreedingCoeff=0.9995;MQ=69.88;MQ0=2;MQRankSum=-8.814;QD=49.63;ReadPosRankSum=5.976;VQSLOD=4.7598;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,35:37:99:1912,99,0	1/1:0,14:14:36.12:695,36,0	0/0:24,0:24:68.24:0,68,976	0/0:21,0:20:50.27:0,50,762	1/1:0,39:40:99:1949,105,0	1/1:0,23:22:60.21:1154,60,0	1/1:0,19:19:45.15:869,45,0	1/1:2,35:37:99:1900,105,0	1/1:1,18:19:45.15:866,45,0	1/1:0,27:27:81.28:1538,81,0	1/1:1,14:15:39.13:752,39,0	1/1:1,33:36:84.29:1623,84,0	1/1:0,21:21:57.20:1101,57,0	1/1:0,17:17:48.16:926,48,0	1/1:2,32:35:87.26:1643,87,0	1/1:1,13:14:36.12:696,36,0	1/1:1,30:31:78.27:1502,78,0	1/1:0,21:21:57.20:1101,57,0	1/1:1,26:27:77.26:1346,77,0	1/1:0,13:13:30.10:576,30,0	1/1:0,42:42:99:2145,111,0	1/1:1,22:24:57.20:1099,57,0	1/1:1,15:15:42.14:804,42,0	1/1:1,20:22:54.19:1040,54,0	1/1:2,15:17:42.08:727,42,0	1/1:1,27:28:78.27:1497,78,0	1/1:3,27:30:78.27:1494,78,0	1/1:0,15:15:42.14:811,42,0
chr10	62043148	.	TAAA	T	14829.82	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=15.583;DP=610;FS=1.392;HRun=3;HaplotypeScore=87.6318;InbreedingCoeff=0.9955;MQ=61.73;MQ0=1;MQRankSum=-0.939;QD=42.37;ReadPosRankSum=3.570;VQSLOD=4.0547;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:99:0,99,2278	0/0:12,0:12:36.12:0,36,887	0/0:13,0:10:27.09:0,27,620	0/0:14,0:13:30.05:0,30,643	0/0:23,0:23:69.23:0,69,1629	1/1:0,27:27:68.90:1095,69,0	1/1:0,22:20:48.16:888,48,0	0/0:40,0:39:99:0,117,2466	0/0:23,0:23:69.22:0,69,1646	1/1:0,27:27:81.26:1436,81,0	1/1:0,11:11:26.88:388,27,0	1/1:0,22:22:51.17:947,51,0	1/1:0,18:18:36.04:631,36,0	1/1:0,26:26:57.20:1058,57,0	1/1:0,31:31:72.16:1300,72,0	1/1:1,34:35:13.10:1339,13,0	0/0:28,0:28:78.26:0,78,1844	0/0:17,0:17:50.99:0,51,1026	1/1:0,19:19:54.08:871,54,0	1/1:0,17:17:48.02:783,48,0	1/1:0,24:24:53.82:885,54,0	0/0:24,0:24:72.21:0,72,1672	0/0:12,0:12:36.10:0,36,829	0/0:21,0:21:63.17:0,63,1398	1/1:0,11:11:26.96:427,27,0	1/1:0,25:25:72.19:1209,72,0	1/1:0,28:28:66.14:1182,66,0	1/1:0,7:7:21.07:391,21,0
chr10	62044177	.	AAAAAAG	A	2909.14	PASS	AB=0.995;AC=41;AF=0.759;AN=54;BaseQRankSum=-0.900;DP=354;FS=0.000;HRun=0;HaplotypeScore=59.7696;InbreedingCoeff=-0.0522;MQ=42.53;MQ0=48;MQRankSum=2.918;QD=9.96;ReadPosRankSum=1.296;VQSLOD=0.9825;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:23:22.55:23,0,31	./.	0/0:20,0:4:9.88:0,10,88	0/0:39,0:6:0.64:0,1,47	0/1:19,0:18:26.35:108,0,26	1/1:1,10:11:8.98:143,9,0	1/1:1,7:8:12.02:207,12,0	0/1:15,0:10:7.15:7,0,135	0/1:12,0:11:9.46:112,0,9	1/1:2,7:9:17.92:178,18,0	1/1:2,11:13:11.99:204,12,0	1/1:0,3:3:3.01:40,3,0	1/1:2,0:2:6:81,6,0	1/1:2,4:5:9.03:167,9,0	1/1:0,9:9:5.98:81,6,0	1/1:1,8:9:9.02:184,9,0	0/1:21,1:20:14.20:182,0,14	1/1:17,0:15:18.04:135,18,0	0/1:16,0:12:6.30:140,0,6	1/1:4,8:9:5.91:82,6,0	1/1:4,0:3:8.94:66,9,0	0/1:16,0:14:40.37:40,0,86	0/1:13,0:10:22.83:23,0,104	0/1:17,0:15:45.36:45,0,83	1/1:6,6:10:28.74:349,29,0	1/1:6,3:8:18.87:255,19,0	1/1:2,6:7:8.74:146,9,0	1/1:0,6:6:3.01:61,3,0
chr10	62044178	.	AAAAAG	A	3233.06	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-3.280;DP=360;FS=6.344;HRun=0;HaplotypeScore=55.2380;InbreedingCoeff=0.3264;MQ=44.38;MQ0=47;MQRankSum=-0.372;QD=11.07;ReadPosRankSum=2.289;VQSLOD=1.1688;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:23,1:23:16.66:137,17,0	1/1:3,0:1:3:27,3,0	0/0:22,0:4:3.47:0,3,29	0/0:46,0:8:3.42:0,3,28	1/1:19,0:18:15:187,15,0	1/1:11,0:11:8.99:96,9,0	1/1:7,0:7:9.03:115,9,0	1/1:15,0:10:5.99:48,6,0	1/1:4,8:11:18.06:315,18,0	1/1:9,0:9:12.01:114,12,0	1/1:13,0:13:12:135,12,0	1/1:3,0:3:2.98:22,3,0	1/1:2,0:2:3.01:41,3,0	1/1:5,0:5:9.03:114,9,0	1/1:9,0:9:5.98:58,6,0	1/1:9,0:9:9.03:115,9,0	1/1:8,14:20:30.05:491,30,0	1/1:16,1:15:23.87:224,24,0	1/1:15,1:12:14.94:148,15,0	1/1:12,0:9:5.51:59,6,0	1/1:4,0:3:8.94:66,9,0	1/1:7,9:14:8.90:92,9,0	1/1:9,4:10:5.97:71,6,0	1/1:7,9:14:9:127,9,0	1/1:12,0:10:26.86:237,27,0	1/1:9,0:8:17.99:186,18,0	1/1:8,0:7:5.81:77,6,0	1/1:6,0:6:3.01:38,3,0
chr10	62044179	.	AAAAG	A	2753.21	PASS	AB=0.995;AC=44;AF=0.786;AN=56;BaseQRankSum=-1.931;DP=362;FS=10.726;HRun=0;HaplotypeScore=52.9956;InbreedingCoeff=0.0313;MQ=44.41;MQ0=48;MQRankSum=4.732;QD=9.43;ReadPosRankSum=0.082;VQSLOD=1.0164;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,18:23:20.89:241,21,0	1/1:3,0:1:3:27,3,0	0/0:22,0:4:8.93:0,9,47	0/0:46,0:8:7.10:0,7,50	1/1:5,14:18:32.97:276,33,0	1/1:10,0:10:8.98:85,9,0	1/1:7,0:7:5.42:92,5,0	0/1:15,0:10:27.60:28,0,88	0/1:12,0:11:0.85:163,0,1	1/1:9,0:9:0.01:92,0,0	1/1:13,0:13:11.99:117,12,0	1/1:3,0:3:2.97:20,3,0	0/1:2,0:2:0.83:24,0,1	1/1:5,0:5:9.02:96,9,0	1/1:9,0:9:5.97:52,6,0	1/1:9,0:9:9.02:97,9,0	0/1:21,1:20:3.72:263,0,4	1/1:5,12:15:23.99:303,24,0	0/1:16,0:12:3.72:104,0,4	1/1:11,0:8:5.56:53,6,0	1/1:4,0:3:8.94:66,9,0	0/1:16,0:14:49.67:50,0,62	0/1:13,0:10:31.47:31,0,70	0/1:16,0:14:44.68:91,0,45	1/1:12,0:10:23.89:213,24,0	1/1:11,0:10:20.15:217,20,0	1/1:8,0:7:2.31:59,2,0	1/1:6,0:6:3.01:32,3,0
chr10	62044180	.	AAAG	A	2353.13	PASS	AB=1.000;AC=42;AF=0.750;AN=56;BaseQRankSum=-0.738;DP=362;FS=10.654;HRun=0;HaplotypeScore=50.2807;InbreedingCoeff=-0.0919;MQ=44.42;MQ0=48;MQRankSum=2.666;QD=8.11;ReadPosRankSum=-0.322;VQSLOD=1.1252;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:21,3:23:20.97:202,21,0	1/1:3,0:1:3:27,3,0	0/0:23,0:4:2.32:0,2,47	0/0:49,0:8:5.85:0,6,56	1/1:18,1:18:35.74:282,36,0	1/1:10,0:10:8.97:73,9,0	1/1:7,0:7:2.97:71,3,0	0/1:16,0:11:50.21:50,0,115	0/1:12,0:11:6.72:128,0,7	0/1:9,0:9:9.27:85,0,9	1/1:12,0:12:11.97:99,12,0	1/1:3,0:3:2.97:20,3,0	0/1:2,0:2:5.83:20,0,6	1/1:5,0:5:9:79,9,0	1/1:9,0:9:5.97:46,6,0	1/1:9,0:9:9:79,9,0	0/1:22,0:20:11.07:206,0,11	1/1:16,0:14:23.95:212,24,0	0/1:18,0:13:16.79:121,0,17	1/1:11,0:8:5.57:47,6,0	1/1:4,0:3:8.94:66,9,0	0/1:16,0:14:44.28:44,0,81	0/1:13,0:10:25.61:26,0,93	0/1:15,0:14:59.48:59,0,63	1/1:12,0:10:24.17:194,24,0	1/1:10,0:9:15.13:194,15,0	0/1:7,0:6:1.30:45,0,1	1/1:6,0:6:3:26,3,0
chr10	62044623	.	TC	T	2128.25	PASS	AB=0.857;AC=14;AF=0.250;AN=56;BaseQRankSum=4.907;DP=572;FS=2.472;HRun=10;HaplotypeScore=64.9059;InbreedingCoeff=0.7380;MQ=84.70;MQ0=0;MQRankSum=-3.605;QD=14.99;ReadPosRankSum=3.574;VQSLOD=4.1194;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,3:42:6.05:0,6,742	1/1:0,7:7:21:182,21,0	0/0:25,0:26:36.89:0,37,324	0/0:19,0:19:20.92:0,21,177	0/0:26,0:26:37.02:0,37,516	0/0:10,0:10:24.05:0,24,257	0/0:26,0:26:39.04:0,39,401	1/1:4,9:13:17.99:156,18,0	0/1:18,3:22:27.19:27,0,387	0/0:14,0:14:18.05:0,18,199	0/0:10,0:11:23.13:0,23,285	0/0:21,0:21:57.12:0,57,607	0/0:22,1:23:19.05:0,19,431	0/0:18,0:19:41.93:0,42,436	0/0:30,1:31:69.14:0,69,732	0/0:27,2:29:37.11:0,37,629	1/1:5,24:29:68.97:599,69,0	0/0:16,0:16:10.57:0,11,332	0/1:8,2:10:31.06:31,0,145	0/0:18,0:18:48.09:0,48,511	0/0:36,0:37:72.44:0,72,749	1/1:1,18:19:44.99:390,45,0	1/1:1,17:18:15.01:358,15,0	1/1:2,22:24:65.98:573,66,0	0/0:20,1:21:16.04:0,16,391	0/0:18,0:18:27.05:0,27,284	0/0:10,1:11:1.03:0,1,239	0/0:11,0:10:27.07:0,27,299
chr10	62047139	.	GT	G	3383.62	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=12.239;DP=655;FS=10.377;HRun=3;HaplotypeScore=59.5112;InbreedingCoeff=0.9994;MQ=66.12;MQ0=2;MQRankSum=-2.430;QD=34.53;ReadPosRankSum=1.935;VQSLOD=3.7550;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,51:53:99:1859,150,0	0/0:11,0:11:33.11:0,33,475	0/0:14,0:10:27.09:0,27,389	0/0:18,0:18:38.16:0,38,603	1/1:1,15:16:42.13:520,42,0	0/0:16,0:16:48.15:0,48,671	0/0:21,0:21:63.21:0,63,903	0/0:23,0:23:66.22:0,66,947	0/0:29,0:29:84.27:0,84,1189	0/0:25,0:25:75.25:0,75,1072	0/0:14,0:14:42.13:0,42,583	0/0:24,0:24:69.22:0,69,975	0/0:22,0:22:66.22:0,66,950	0/0:13,0:13:39.13:0,39,561	0/0:28,0:28:81.26:0,81,1150	0/0:21,0:21:63.21:0,63,903	0/0:31,0:31:78.26:0,78,1122	1/1:0,29:28:81.25:1004,81,0	0/0:18,0:18:53.99:0,54,723	0/0:20,0:20:60.20:0,60,864	0/0:49,0:49:99:0,147,2074	0/0:18,0:18:51.17:0,51,734	0/0:20,0:20:57.19:0,57,820	0/0:46,0:46:99:0,135,1920	0/0:14,0:14:42.12:0,42,585	0/0:18,0:18:51.17:0,51,735	0/0:30,0:30:90.29:0,90,1277	0/0:14,0:14:42.14:0,42,605
chr10	62047917	.	TGAC	T	887.88	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.582;DP=499;FS=12.848;HRun=0;HaplotypeScore=91.5048;InbreedingCoeff=0.9955;MQ=71.71;MQ0=0;MQRankSum=-8.723;QD=16.75;ReadPosRankSum=0.285;VQSLOD=2.1136;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,15:21:43.46:491,43,0	0/0:8,0:8:24.08:0,24,541	0/0:13,0:13:29.46:0,29,574	0/0:11,0:11:32.73:0,33,585	1/1:12,10:23:27.08:318,27,0	0/0:17,0:17:51.18:0,51,1182	0/0:19,0:19:57.20:0,57,1347	0/0:26,0:26:75.25:0,75,1666	0/0:18,0:18:51.16:0,51,1103	0/0:26,0:26:72.25:0,72,1701	0/0:20,0:20:57.20:0,57,1302	0/0:19,0:19:57.20:0,57,1325	0/0:15,0:15:45.15:0,45,1039	0/0:13,0:13:39.13:0,39,894	0/0:15,0:15:42.09:0,42,869	0/0:12,0:12:36.12:0,36,833	0/0:28,0:27:78.25:0,78,1728	1/1:4,5:9:18.04:220,18,0	0/0:16,0:16:48.16:0,48,1126	0/0:15,0:15:45.15:0,45,1063	0/0:17,0:17:51.06:0,51,964	0/0:25,0:25:75.26:0,75,1765	0/0:27,0:27:75.26:0,75,1760	0/0:23,0:23:66.18:0,66,1448	0/0:15,0:15:45.15:0,45,1063	0/0:17,0:17:45.15:0,45,1024	0/0:19,0:19:57.18:0,57,1294	0/0:12,0:12:33.11:0,33,741
chr10	62047918	.	GACGT	G	1455.01	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.928;DP=485;FS=8.766;HRun=0;HaplotypeScore=97.6967;InbreedingCoeff=0.9956;MQ=71.42;MQ0=0;MQRankSum=-8.244;QD=33.07;ReadPosRankSum=0.120;VQSLOD=2.8378;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:18:47.99:760,48,0	0/0:8,0:8:24.08:0,24,675	0/0:12,0:12:30.10:0,30,732	0/0:11,0:11:33.02:0,33,761	1/1:16,4:20:27.09:510,27,0	0/0:17,0:17:51.18:0,51,1476	0/0:19,0:19:57.20:0,57,1652	0/0:25,0:25:75.26:0,75,2083	0/0:17,0:17:51.18:0,51,1420	0/0:27,0:27:75.26:0,75,2157	0/0:20,0:20:57.20:0,57,1575	0/0:19,0:19:57.20:0,57,1624	0/0:15,0:15:45.15:0,45,1290	0/0:13,0:13:39.13:0,39,1127	0/0:14,0:14:42.13:0,42,1114	0/0:12,0:12:36.12:0,36,1042	0/0:29,0:28:81.26:0,81,2186	1/1:6,0:6:18.06:327,18,0	0/0:16,0:16:48.16:0,48,1391	0/0:15,0:15:45.15:0,45,1304	0/0:17,0:17:51.16:0,51,1321	0/0:25,0:25:75.26:0,75,2170	0/0:25,0:25:75.26:0,75,2170	0/0:22,0:22:66.18:0,66,1766	0/0:16,0:16:48.16:0,48,1373	0/0:16,0:16:45.15:0,45,1303	0/0:19,0:19:57.18:0,57,1580	0/0:12,0:12:33.11:0,33,917
chr10	62047923	.	G	GT	428.19	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.849;DP=488;FS=17.722;HRun=1;HaplotypeScore=71.8456;InbreedingCoeff=0.9927;MQ=71.44;MQ0=0;MQRankSum=-8.852;QD=12.98;ReadPosRankSum=1.043;VQSLOD=1.1544;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,15:15:39.44:263,39,0	0/0:8,0:8:24.08:0,24,333	0/0:12,0:12:33.07:0,33,428	0/0:13,0:13:38.60:0,39,474	1/1:3,10:13:26.37:175,26,0	0/0:18,0:18:54.18:0,54,753	0/0:21,0:21:63.21:0,63,878	0/0:23,0:23:69.22:0,69,932	0/0:15,0:15:45.15:0,45,629	0/0:26,0:26:78.26:0,78,1089	0/0:18,0:18:54.18:0,54,751	0/0:18,0:18:54.18:0,54,754	0/0:17,0:17:51.17:0,51,709	0/0:18,0:18:51.17:0,51,699	0/0:13,0:13:39.13:0,39,544	0/0:14,0:14:42.14:0,42,584	0/0:28,0:27:72.24:0,72,1004	1/1:0,5:5:14.99:131,15,0	0/0:18,0:18:51.17:0,51,707	0/0:17,0:17:51.17:0,51,710	0/0:17,0:17:51.17:0,51,710	0/0:28,0:28:84.27:0,84,1153	0/0:25,0:25:75.25:0,75,1047	0/0:24,0:24:69.19:0,69,938	0/0:17,0:17:51.17:0,51,711	0/0:17,0:17:51.17:0,51,707	0/0:19,0:19:57.18:0,57,778	0/0:11,0:11:30.10:0,30,420
chr10	62047927	.	TCTGGAGAGCACA	T	2451.48	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.695;DP=488;FS=15.540;HRun=0;HaplotypeScore=177.5987;InbreedingCoeff=0.9929;MQ=72.34;MQ0=0;MQRankSum=-8.675;QD=76.61;ReadPosRankSum=1.257;VQSLOD=2.6790;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,15:15:39.13:1174,39,0	0/0:8,0:8:24.08:0,24,1527	0/0:14,0:14:36.12:0,36,1690	0/0:14,0:14:40.67:0,41,1853	1/1:2,10:12:27.09:907,27,0	0/0:22,0:22:66.23:0,66,4121	0/0:20,0:20:60.21:0,60,3423	0/0:19,0:19:57.16:0,57,2988	0/0:17,0:17:51.18:0,51,3085	0/0:27,0:27:81.27:0,81,4599	0/0:17,0:17:51.18:0,51,3201	0/0:18,0:18:54.19:0,54,3430	0/0:17,0:17:51.18:0,51,3242	0/0:18,0:18:54.19:0,54,3303	0/0:14,0:14:42.14:0,42,2564	0/0:15,0:15:45.15:0,45,2837	0/0:26,0:25:75.26:0,75,4578	1/1:0,5:5:15.05:511,15,0	0/0:16,0:16:48.16:0,48,2911	0/0:17,0:17:51.18:0,51,2955	0/0:17,0:17:51.18:0,51,3183	0/0:29,0:29:87.30:0,87,4945	0/0:26,0:26:78.27:0,78,4881	0/0:22,0:22:66.23:0,66,4173	0/0:17,0:17:51.18:0,51,3132	0/0:17,0:17:51.18:0,51,3224	0/0:19,0:19:57.20:0,57,3616	0/0:10,0:10:30.10:0,30,1907
chr10	62048384	.	T	TTG	1004.92	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-7.594;DP=569;FS=3.045;HRun=0;HaplotypeScore=70.7219;InbreedingCoeff=0.9993;MQ=87.14;MQ0=0;MQRankSum=-3.072;QD=47.85;ReadPosRankSum=2.162;VQSLOD=4.9683;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:69.22:0,69,969	0/0:14,0:14:42.14:0,42,602	0/0:23,0:23:60.15:0,60,783	0/0:18,0:18:38.93:0,39,444	0/0:29,0:29:84.28:0,84,1203	0/0:19,0:19:57.19:0,57,817	0/0:17,0:17:51.17:0,51,731	0/0:22,0:22:60.20:0,60,860	0/0:11,0:11:33.11:0,33,473	0/0:27,0:27:81.27:0,81,1161	0/0:22,0:22:60.20:0,60,858	0/0:19,0:19:57.19:0,57,816	0/0:17,0:17:51.16:0,51,714	0/0:18,0:18:42.14:0,42,602	1/1:0,21:21:60.21:1100,60,0	0/0:18,0:18:54.18:0,54,774	0/0:20,0:20:60.20:0,60,860	0/0:23,0:23:69.23:0,69,988	0/0:21,0:21:60.19:0,60,843	0/0:16,0:16:48.14:0,48,654	0/0:22,0:22:63.21:0,63,902	0/0:20,0:20:54.15:0,54,721	0/0:20,0:20:57.19:0,57,817	0/0:13,0:13:33.11:0,33,473	0/0:24,0:24:69.21:0,69,968	0/0:22,0:22:60.19:0,60,844	0/0:32,0:32:90.30:0,90,1289	0/0:17,0:17:51.17:0,51,731
chr10	62049014	.	TCCC	T	25791.19	PASS	AB=0.526;AC=45;AF=0.804;AN=56;BaseQRankSum=6.552;DP=738;FS=1.519;HRun=4;HaplotypeScore=129.7289;InbreedingCoeff=0.8909;MQ=89.84;MQ0=0;MQRankSum=-10.513;QD=43.94;ReadPosRankSum=6.046;VQSLOD=3.6470;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,39:39:90.03:1588,90,0	1/1:0,11:11:27.09:476,27,0	0/0:43,0:43:93.63:0,94,2376	0/0:33,0:33:96.27:0,96,2023	1/1:1,29:30:63.22:1111,63,0	1/1:0,21:21:48.16:846,48,0	1/1:0,19:19:48.16:847,48,0	1/1:2,33:35:99:1635,99,0	1/1:0,28:28:75.26:1323,75,0	1/1:1,28:29:84.28:1455,84,0	1/1:0,16:16:36.12:635,36,0	1/1:1,15:16:42.14:741,42,0	1/1:0,33:33:87.30:1533,87,0	1/1:1,27:28:72.25:1270,72,0	1/1:0,32:32:84.29:1482,84,0	1/1:1,36:37:99:1746,99,0	1/1:0,17:17:45.63:793,46,0	1/1:0,9:9:27.09:476,27,0	0/1:2,18:20:13.36:862,0,13	1/1:0,37:37:90.31:1587,90,0	1/1:0,32:32:51.17:900,51,0	0/0:18,0:18:51.16:0,51,1161	0/0:26,0:26:78.27:0,78,1800	0/0:31,0:31:93.32:0,93,2200	1/1:0,25:25:57.20:1005,57,0	1/1:1,32:33:93.32:1627,93,0	1/1:1,28:29:78.27:1376,78,0	1/1:0,11:11:27.09:476,27,0
chr10	62049284	.	G	GA	15205.84	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-3.028;DP=660;FS=3.309;HRun=9;HaplotypeScore=100.7541;InbreedingCoeff=0.9872;MQ=81.06;MQ0=0;MQRankSum=-6.979;QD=24.49;ReadPosRankSum=4.443;VQSLOD=4.8352;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,34:40:93.24:1016,93,0	1/1:1,0:7:14.33:77,14,0	0/0:23,0:23:27.60:0,28,357	0/0:16,0:16:28.67:0,29,217	1/1:1,28:29:78.07:819,78,0	1/1:3,21:24:43.44:639,43,0	1/1:9,20:29:57.15:628,57,0	1/1:3,0:22:51.55:279,52,0	1/1:1,23:25:43.12:696,43,0	1/1:10,24:35:75.10:790,75,0	1/1:5,16:21:42.98:439,43,0	1/1:2,18:21:50.93:530,51,0	1/1:3,17:20:39.11:430,39,0	1/1:3,20:24:47.94:503,48,0	1/1:5,18:24:44.95:477,45,0	1/1:5,17:22:54.13:587,54,0	1/1:2,0:21:48.50:249,48,0	1/1:5,15:22:35.32:416,35,0	1/1:3,9:12:27.07:297,27,0	1/1:3,28:31:70.45:869,70,0	1/1:1,20:21:60.16:661,60,0	1/1:1,20:21:57.15:631,57,0	1/1:4,20:24:60.12:650,60,0	1/1:3,27:30:49.15:770,49,0	1/1:2,20:23:66.15:715,66,0	1/1:1,27:29:81.05:871,81,0	1/1:3,30:32:87.20:935,87,0	1/1:1,10:11:21.72:232,22,0
chr10	62049686	.	GCACACA	G	4547.73	PASS	AB=0.686;AC=39;AF=0.750;AN=52;BaseQRankSum=-2.706;DP=366;FS=3.823;HRun=0;HaplotypeScore=98.2217;InbreedingCoeff=0.6935;MQ=53.56;MQ0=6;MQRankSum=-3.450;QD=16.72;ReadPosRankSum=2.938;VQSLOD=4.1840;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:27:45.15:0,45,1192	1/1:0,0:7:11.23:166,11,0	./.	./.	0/0:7,0:8:15.05:0,15,266	1/1:6,7:14:15.41:218,15,0	1/1:5,6:12:10.59:184,11,0	0/1:13,0:24:20.39:31,0,20	0/0:3,0:10:14.84:0,15,196	1/1:5,9:14:27.06:450,27,0	1/1:2,10:12:12.04:225,12,0	1/1:1,9:11:16.61:318,17,0	1/1:2,3:8:14.22:245,14,0	1/1:3,6:8:8.82:188,9,0	1/1:1,4:5:6.02:125,6,0	1/1:2,8:12:12.74:206,13,0	1/1:12,0:27:9.03:126,9,0	1/1:7,6:14:12.04:230,12,0	1/1:6,6:13:14.13:301,14,0	1/1:3,10:13:8.79:136,9,0	1/1:11,14:24:1.18:4,1,0	0/0:3,0:6:12.03:0,12,133	0/0:12,0:13:5.95:0,6,48	0/0:5,0:13:3.01:0,3,37	1/1:2,10:14:12.04:184,12,0	1/1:4,13:18:42.14:809,42,0	1/1:1,5:6:12.04:251,12,0	1/1:4,7:12:11.90:149,12,0
chr10	62050406	.	T	TCTGGGCGGGCGGTC	10374.34	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-0.469;DP=563;FS=5.658;HRun=0;HaplotypeScore=216.0672;InbreedingCoeff=0.9570;MQ=82.06;MQ0=0;MQRankSum=-12.346;QD=61.75;ReadPosRankSum=-4.269;VQSLOD=3.5859;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:22,11:37:46.40:2548,46,0	1/1:7,0:7:5.98:201,6,0	0/0:21,0:21:27.07:0,27,771	0/0:20,0:20:32.41:0,32,750	1/1:10,5:15:11.97:737,12,0	0/0:19,0:19:42.14:0,42,1509	0/0:22,0:22:54.17:0,54,1891	1/1:24,0:24:18.05:797,18,0	1/1:8,4:15:27.09:1602,27,0	0/0:25,0:25:60.20:0,60,1973	0/0:8,0:8:15.05:0,15,598	0/0:21,0:20:45.15:0,45,1769	0/0:16,0:16:39.13:0,39,1363	0/0:29,0:29:54.18:0,54,1837	0/0:28,0:28:60.19:0,60,2162	0/0:21,0:21:48.15:0,48,1818	1/1:10,8:20:27.09:1696,27,0	0/0:13,0:13:30.07:0,30,1005	0/0:12,0:12:12.01:0,12,332	0/0:22,0:22:60.21:0,60,2159	0/0:39,0:39:99:0,108,3714	1/1:8,6:15:18.06:1080,18,0	1/1:10,4:14:8.99:425,9,0	1/1:13,8:21:25.33:1287,25,0	0/0:19,0:19:36.12:0,36,1301	0/0:29,0:29:60.20:0,60,2241	0/0:23,0:23:57.20:0,57,2174	0/0:8,0:8:18.04:0,18,548
chr10	62051022	.	T	TC	1134.50	PASS	AB=0.984;AC=47;AF=0.839;AN=56;BaseQRankSum=-3.309;DP=224;FS=14.011;HRun=11;HaplotypeScore=36.9961;InbreedingCoeff=0.0343;MQ=77.30;MQ0=0;MQRankSum=-0.313;QD=5.30;ReadPosRankSum=3.224;VQSLOD=0.1844;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:10,0:10:8.99:74,9,0	1/1:2,0:2:2.99:24,3,0	0/0:10,0:8:8.23:0,8,55	0/1:19,0:13:7.22:29,0,7	1/1:7,0:7:3:25,3,0	0/1:12,0:12:10:48,0,10	1/1:12,2:16:19.77:166,20,0	1/1:8,0:8:2.94:18,3,0	1/1:6,0:7:10.13:63,10,0	1/1:6,0:6:3:25,3,0	1/1:8,0:8:5.97:45,6,0	1/1:6,0:6:5.97:46,6,0	1/1:5,0:5:5.99:49,6,0	1/1:6,2:8:9.48:86,9,0	1/1:5,0:5:3:25,3,0	0/1:7,0:7:3.88:66,0,4	0/1:14,2:16:2.28:123,0,2	1/1:5,1:6:8.98:81,9,0	0/1:6,0:6:13.64:24,0,14	0/1:7,0:7:0:0,0,0	1/1:5,2:6:6.01:58,6,0	1/1:7,0:6:2.84:14,3,0	1/1:2,0:2:5.99:50,6,0	1/1:13,0:14:6.25:36,6,0	1/1:4,1:5:3:26,3,0	0/1:7,0:7:0:0,0,0	1/1:7,0:7:3:25,3,0	1/1:4,0:4:3.47:26,3,0
chr10	62051041	.	TTTTTTG	T	1676.91	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=6.778;DP=256;FS=20.907;HRun=0;HaplotypeScore=68.6465;InbreedingCoeff=-0.1497;MQ=63.22;MQ0=3;MQRankSum=-5.266;QD=8.87;ReadPosRankSum=-0.787;VQSLOD=-0.3087;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:13,0:13:85.81:86,0,331	0/0:1,0:1:3.01:0,3,67	0/0:18,0:6:17.63:0,18,286	0/1:22,0:11:11.72:12,0,54	0/0:6,0:6:12.03:0,12,204	0/1:10,0:10:44.38:70,0,44	0/0:15,0:15:1.68:0,2,137	0/0:13,0:13:36.10:0,36,708	1/1:9,0:9:2.98:21,3,0	0/1:11,0:11:8.15:106,0,8	1/1:7,0:7:14.81:103,15,0	1/1:5,0:5:5.98:47,6,0	1/1:4,0:4:5.96:43,6,0	0/1:5,0:5:29.02:32,0,29	0/1:4,0:4:12.31:12,0,35	0/1:6,0:6:22.53:70,0,23	0/0:14,0:14:29.75:0,30,242	0/1:9,0:9:16.04:33,0,16	0/1:10,0:10:15.53:16,0,149	0/1:13,0:13:25.37:161,0,25	0/1:11,0:11:38.40:38,0,72	1/1:0,4:4:12.04:274,12,0	1/1:0,8:8:15.05:308,15,0	1/1:4,10:14:11.82:228,12,0	0/1:5,0:5:9.85:10,0,22	0/1:6,0:6:38.04:78,0,38	0/1:7,0:7:8.10:89,0,8	0/1:6,0:5:9.23:9,0,69
chr10	62051044	.	TTTGTTGTTG	T	4704.43	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-2.198;DP=269;FS=11.955;HRun=0;HaplotypeScore=69.7991;InbreedingCoeff=0.6889;MQ=60.99;MQ0=4;MQRankSum=-1.857;QD=33.84;ReadPosRankSum=4.750;VQSLOD=2.8688;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:16:25.33:0,25,939	0/0:2,0:2:6.02:0,6,234	0/0:19,0:6:6.02:0,6,274	0/0:22,0:11:5.99:0,6,85	0/0:5,0:8:20.96:0,21,655	1/1:3,7:10:15.05:401,15,0	1/1:7,7:14:3.01:83,3,0	0/0:14,0:14:27.09:0,27,1067	1/1:2,0:9:3.01:63,3,0	1/1:1,10:11:20.99:552,21,0	1/1:0,7:7:15.05:408,15,0	1/1:0,5:5:6.02:167,6,0	1/1:0,4:4:6.02:166,6,0	1/1:2,3:5:6.02:166,6,0	1/1:2,2:4:3.01:83,3,0	1/1:2,4:6:15.05:367,15,0	0/0:11,0:24:3.01:0,3,54	1/1:1,6:7:6.02:167,6,0	1/1:6,4:10:9:188,9,0	1/1:3,10:13:27.09:741,27,0	1/1:4,8:11:9.03:242,9,0	0/0:4,0:4:8.03:0,8,23	0/0:8,0:8:12.07:0,12,64	0/0:13,0:13:9.12:0,9,72	1/1:1,3:4:3.01:77,3,0	1/1:2,4:6:12.04:333,12,0	1/1:1,6:7:15.05:417,15,0	1/1:4,1:4:3.01:83,3,0
chr10	62051155	.	AAGTGAG	A	1177.91	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.969;DP=529;FS=0.853;HRun=0;HaplotypeScore=114.1335;InbreedingCoeff=0.9515;MQ=84.19;MQ0=0;MQRankSum=-6.176;QD=31.84;ReadPosRankSum=-1.001;VQSLOD=3.3142;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,17:19:30.06:608,30,0	0/0:7,0:7:18.06:0,18,619	0/0:22,0:21:45.12:0,45,1191	0/0:21,0:19:6.93:0,7,1453	1/1:4,14:18:33.06:692,33,0	0/0:17,0:17:48.16:0,48,1637	0/0:21,0:21:57.20:0,57,1967	0/0:22,0:22:66.23:0,66,2206	0/0:17,0:17:51.18:0,51,1735	0/0:14,0:14:27.09:0,27,866	0/0:22,0:22:57.20:0,57,1911	0/0:19,0:19:57.20:0,57,1913	0/0:17,0:17:48.16:0,48,1612	0/0:16,0:16:48.16:0,48,1658	0/0:19,0:19:57.20:0,57,1972	0/0:14,0:14:38.93:0,39,1203	0/0:29,0:29:81.28:0,81,2720	0/0:17,0:17:51.18:0,51,1747	0/0:19,0:19:57.20:0,57,1883	0/0:18,0:18:48.16:0,48,1656	0/0:23,0:23:60.21:0,60,2069	0/0:18,0:18:51.18:0,51,1724	0/0:21,0:21:51.16:0,51,1671	0/0:22,0:22:51.18:0,51,1733	0/0:17,0:17:48.16:0,48,1642	0/0:27,0:27:75.26:0,75,2515	0/0:20,0:20:60.21:0,60,1950	0/0:13,0:13:39.13:0,39,1287
chr10	62051647	.	GGT	G	3012.36	PASS	AB=0.944;AC=46;AF=0.852;AN=54;BaseQRankSum=-2.739;DP=298;FS=1.647;HRun=0;HaplotypeScore=45.8433;InbreedingCoeff=0.5015;MQ=72.65;MQ0=2;MQRankSum=-4.372;QD=11.91;ReadPosRankSum=-4.353;VQSLOD=2.4055;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:17:6.94:155,7,0	./.	0/0:19,0:15:37.63:0,38,491	0/0:15,0:15:38.94:0,39,565	1/1:8,0:8:11.99:102,12,0	1/1:13,1:14:22.36:203,22,0	1/1:15,3:17:31.55:305,32,0	1/1:10,0:10:11.78:95,12,0	1/1:7,0:7:8.44:79,8,0	1/1:2,11:12:20.92:163,21,0	1/1:7,1:8:5.63:31,6,0	1/1:14,1:15:27.04:204,27,0	1/1:5,0:5:2.45:11,2,0	1/1:7,1:8:17.37:129,17,0	1/1:7,0:7:10.73:68,11,0	1/1:13,2:15:35.09:281,35,0	1/1:14,0:14:11.02:162,11,0	1/1:10,3:13:31.42:293,31,0	1/1:7,0:7:8.75:71,9,0	1/1:0,4:4:11.91:104,12,0	1/1:14,1:15:8.66:59,9,0	0/1:6,0:6:3.89:63,0,4	1/1:5,0:5:1.82:5,2,0	0/1:7,1:7:4.51:52,0,5	0/0:10,1:11:0:0,0,0	1/1:3,5:8:17.36:160,17,0	1/1:10,6:16:28.35:271,28,0	1/1:11,1:12:11.05:79,11,0
chr10	62051648	.	GT	G	4160.83	PASS	AB=0.550;AC=49;AF=0.907;AN=54;BaseQRankSum=-3.041;DP=296;FS=0.000;HRun=1;HaplotypeScore=39.0282;InbreedingCoeff=0.6941;MQ=72.73;MQ0=2;MQRankSum=-4.480;QD=15.88;ReadPosRankSum=-4.495;VQSLOD=1.8101;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:16:24.81:194,25,0	./.	0/0:19,0:15:37.89:0,38,416	0/0:15,0:15:32.19:0,32,434	1/1:8,0:8:14.99:126,15,0	1/1:13,1:14:26.93:223,27,0	1/1:14,4:17:38.55:339,39,0	1/1:9,0:9:11.64:96,12,0	1/1:7,0:7:11.79:104,12,0	1/1:11,1:11:20.92:163,21,0	1/1:1,7:8:6.45:63,6,0	1/1:13,2:15:37.82:334,38,0	1/1:0,5:5:2.94:41,3,0	1/1:6,2:8:20.94:185,21,0	1/1:5,2:7:20.97:193,21,0	1/1:14,2:16:44.83:412,45,0	1/1:13,1:14:27.80:220,28,0	1/1:11,2:13:35.89:300,36,0	1/1:0,7:7:9.01:106,9,0	1/1:4,0:4:11.88:81,12,0	1/1:2,12:14:9.02:110,9,0	1/1:5,1:6:12.44:101,12,0	1/1:4,1:5:1.55:4,2,0	1/1:7,1:7:13.05:143,13,0	0/1:2,9:11:0:0,0,0	1/1:5,3:8:17.96:174,18,0	1/1:15,2:17:37.81:300,38,0	1/1:1,11:12:12.01:147,12,0
chr10	62052001	.	TA	T	3677.54	PASS	AB=0.575;AC=31;AF=0.554;AN=56;BaseQRankSum=-5.265;DP=530;FS=13.606;HRun=14;HaplotypeScore=70.5431;InbreedingCoeff=0.7465;MQ=70.47;MQ0=0;MQRankSum=-0.250;QD=11.67;ReadPosRankSum=5.407;VQSLOD=1.9522;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:26:46.43:0,46,267	0/0:3,0:5:11.63:0,12,74	0/0:36,0:12:14.30:0,14,109	0/0:24,1:11:6.58:0,7,63	0/0:6,0:21:52.10:0,52,317	0/1:5,15:23:26.82:249,0,27	1/1:1,10:12:23.43:154,23,0	0/0:9,0:25:60.92:0,61,394	0/0:4,1:16:14.14:0,14,173	1/1:6,13:19:10.78:210,11,0	1/1:4,17:22:40.60:273,41,0	1/1:2,13:16:22.77:150,23,0	1/1:2,9:13:25.59:162,26,0	1/1:6,10:18:24.85:156,25,0	1/1:2,10:17:36.96:215,37,0	1/1:2,10:13:27.68:176,28,0	0/0:11,0:20:55.29:0,55,345	1/1:3,14:18:31.03:198,31,0	1/1:10,15:27:38.86:310,39,0	1/1:3,10:14:28.79:191,29,0	0/1:4,6:11:10.93:71,0,11	0/0:2,0:4:8.72:0,9,57	0/0:10,0:24:46.51:0,47,304	0/0:5,0:13:17.04:0,17,86	1/1:4,19:24:49.63:335,50,0	1/1:8,19:28:58.47:390,58,0	0/1:4,17:21:8.07:240,0,8	1/1:4,13:18:7.33:200,7,0
chr10	62052070	.	T	TA	1898.74	PASS	AB=0.867;AC=7;AF=0.125;AN=56;BaseQRankSum=-6.077;DP=562;FS=0.000;HRun=8;HaplotypeScore=64.3823;InbreedingCoeff=0.8113;MQ=66.20;MQ0=0;MQRankSum=-2.313;QD=24.03;ReadPosRankSum=-1.999;VQSLOD=3.5471;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:74.96:0,75,668	1/1:0,12:12:33.10:382,33,0	0/0:11,0:11:20.03:0,20,165	0/0:8,0:6:7.61:0,8,57	0/0:23,0:23:59.97:0,60,534	0/0:21,0:21:56.89:0,57,497	0/0:13,0:13:27:0,27,242	1/1:4,18:22:54.09:584,54,0	0/0:19,0:19:47.98:0,48,431	0/0:35,0:35:93:0,93,838	0/0:28,0:28:65.96:0,66,587	0/0:23,0:23:44.96:0,45,398	0/0:16,0:16:45.01:0,45,406	0/0:9,0:9:24.01:0,24,220	0/0:19,0:19:54.03:0,54,494	0/0:16,0:16:39.01:0,39,354	1/1:3,28:32:93.13:1045,93,0	0/0:20,0:20:44.94:0,45,396	0/0:18,0:18:54.01:0,54,489	0/0:23,0:23:60.03:0,60,549	0/0:11,0:11:30.02:0,30,274	0/0:14,0:14:36.02:0,36,329	0/0:23,0:23:63.03:0,63,576	0/0:8,0:8:17.99:0,18,160	0/0:24,0:24:54.02:0,54,494	0/0:38,0:38:96.02:0,96,870	0/0:31,0:31:81.01:0,81,731	0/1:11,2:13:36.88:37,0,197
chr10	62053372	.	A	ACC	661.52	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-3.012;DP=511;FS=1.659;HRun=4;HaplotypeScore=101.0474;InbreedingCoeff=0.8020;MQ=52.64;MQ0=24;MQRankSum=1.859;QD=15.75;ReadPosRankSum=-1.846;VQSLOD=-0.0586;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:26:40.27:0,40,361	1/1:0,5:5:6.02:87,6,0	0/0:53,0:14:6.70:0,7,131	0/0:50,0:16:18.96:0,19,191	0/0:22,0:22:37.52:0,38,370	0/0:17,0:17:35.69:0,36,358	0/0:14,0:12:26.27:0,26,223	1/1:20,1:20:48.02:589,48,0	0/0:11,0:11:8.53:0,9,229	0/0:16,0:17:47.06:0,47,430	0/0:14,0:13:23.56:0,24,186	0/0:18,0:18:39:0,39,421	0/0:4,0:4:8.51:0,9,73	0/0:20,0:18:32.71:0,33,336	0/0:16,0:16:38.56:0,39,380	0/0:16,0:16:30.09:0,30,361	1/1:14,1:15:17.84:118,18,0	0/0:18,0:18:38.71:0,39,368	0/0:21,0:18:53.51:0,54,491	0/0:21,0:21:50.20:0,50,470	0/0:8,0:8:8.45:0,8,60	0/0:10,0:9:20.82:0,21,205	0/0:18,0:18:30.69:0,31,329	0/0:7,0:7:2.45:0,2,28	0/0:10,0:9:17.71:0,18,165	0/0:19,0:18:49.02:0,49,429	0/0:21,0:20:34.59:0,35,331	0/0:14,0:14:38.71:0,39,404
chr10	62053375	.	C	CAAAA	3387.27	PASS	AB=0.907;AC=38;AF=0.679;AN=56;BaseQRankSum=0.846;DP=516;FS=55.787;HRun=0;HaplotypeScore=102.7064;InbreedingCoeff=-0.1418;MQ=54.56;MQ0=23;MQRankSum=0.474;QD=7.48;ReadPosRankSum=-0.807;VQSLOD=-0.4811;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:13,0:29:11.98:59,0,12	0/0:6,0:5:5.83:0,6,37	0/1:53,0:14:8.68:9,0,323	0/0:52,0:17:9.84:0,10,278	0/1:22,0:23:6.67:7,0,36	1/1:12,4:16:6:194,6,0	0/1:7,5:11:20.92:228,0,21	0/1:20,0:19:6.72:7,0,444	0/1:11,0:11:8.45:68,0,8	1/1:14,2:18:5.65:221,6,0	1/1:8,3:14:7.03:178,7,0	0/1:15,1:16:23.90:38,0,24	1/1:2,2:5:1.35:46,1,0	0/1:14,1:19:4.15:85,0,4	1/1:12,3:16:1.01:176,1,0	0/1:16,0:16:31.82:90,0,32	0/1:14,0:14:73.73:74,0,80	1/1:11,4:17:3.50:195,3,0	1/1:15,5:19:13.31:379,13,0	1/1:15,3:21:10.32:290,10,0	1/1:5,0:7:0.01:27,0,0	0/1:10,0:9:5.48:42,0,5	1/1:14,0:18:13.87:260,14,0	0/0:4,0:5:1.31:0,1,3	1/1:8,0:12:1.67:112,2,0	1/1:12,6:18:21.16:465,21,0	1/1:13,6:19:0.17:102,0,0	0/1:18,0:17:7.56:36,0,8
chr10	62053376	.	C	CCCAAAAAA	4353.17	PASS	AB=0.995;AC=25;AF=0.446;AN=56;BaseQRankSum=3.667;DP=562;FS=75.163;HRun=0;HaplotypeScore=162.7175;InbreedingCoeff=-0.3904;MQ=53.33;MQ0=20;MQRankSum=0.319;QD=11.49;ReadPosRankSum=-0.509;VQSLOD=0.8378;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:30:30.01:0,30,308	1/1:6,0:5:6.02:87,6,0	0/0:54,0:15:18:0,18,329	0/0:51,0:17:15:0,15,312	0/0:14,0:24:35.29:0,35,332	0/1:15,0:15:37.13:37,0,214	0/1:13,0:11:99:106,0,146	1/1:9,12:22:54.14:1130,54,0	0/1:13,0:13:99:158,0,163	0/1:20,0:20:86.84:87,0,251	0/1:18,0:17:99:172,0,102	0/0:18,0:18:14.22:0,14,295	0/1:6,0:6:44.75:51,0,45	0/1:20,0:19:8.69:9,0,221	0/1:17,0:18:72.61:73,0,200	0/1:19,0:19:99:277,0,239	1/1:3,1:19:23.14:496,23,0	0/1:20,0:20:75.21:75,0,163	0/1:25,0:23:99:154,0,242	0/1:24,0:24:99:193,0,236	0/1:7,0:7:17.42:99,0,17	0/1:15,0:13:99:318,0,111	0/1:18,0:18:99:290,0,200	0/0:6,0:6:0.45:0,0,25	0/1:14,0:13:65.51:66,0,95	0/1:21,0:21:99:285,0,202	0/1:24,0:23:99:189,0,177	0/1:18,0:17:1.65:2,0,266
chr10	62053796	.	AGT	A	19905.87	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-5.403;DP=977;FS=34.017;HRun=0;HaplotypeScore=133.9536;InbreedingCoeff=0.9696;MQ=58.13;MQ0=44;MQRankSum=5.616;QD=24.58;ReadPosRankSum=6.923;VQSLOD=3.0244;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,44:54:99:1261,102,0	1/1:1,6:7:12.04:151,12,0	0/0:83,0:20:29.24:0,29,430	0/0:82,1:23:23.50:0,23,466	1/1:3,22:25:51.13:644,51,0	1/1:2,18:18:42.13:530,42,0	1/1:8,22:30:60.19:757,60,0	1/1:16,17:31:48.14:592,48,0	1/1:7,24:30:63.20:795,63,0	1/1:5,32:37:90.28:1124,90,0	1/1:7,18:24:35.79:449,36,0	1/1:1,35:35:78.25:984,78,0	1/1:10,25:33:54:657,54,0	1/1:5,25:29:63.20:795,63,0	1/1:7,33:39:87.01:1072,87,0	1/1:1,21:21:42.13:530,42,0	1/1:5,31:35:90.03:1120,90,0	1/1:7,13:20:14.20:394,14,0	1/1:11,12:19:19.36:338,19,0	1/1:6,16:21:39.12:492,39,0	1/1:19,97:115:99:3059,238,0	1/1:4,21:24:51.16:644,51,0	1/1:4,12:16:30.10:379,30,0	1/1:5,32:36:74.70:918,75,0	1/1:6,14:20:36.11:454,36,0	1/1:6,30:36:78.24:975,78,0	1/1:4,13:16:30.09:375,30,0	1/1:4,11:15:33.10:416,33,0
chr10	62054333	.	CATATATATATAT	C	1178.32	PASS	AC=20;AF=0.833;AN=24;BaseQRankSum=3.892;DP=128;FS=0.000;HRun=0;HaplotypeScore=56.7361;InbreedingCoeff=0.4515;MQ=77.64;MQ0=1;MQRankSum=-3.683;QD=20.32;ReadPosRankSum=0.167;VQSLOD=1.3349;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	./.	1/1:5,1:9:6.02:186,6,0	./.	0/0:14,0:13:9.03:0,9,314	./.	1/1:3,0:4:6.02:89,6,0	./.	./.	./.	1/1:4,0:4:3.01:58,3,0	1/1:3,1:4:6.02:148,6,0	1/1:2,0:2:3.01:97,3,0	0/0:14,0:14:30.08:0,30,1377	1/1:13,0:14:6.02:190,6,0	1/1:3,3:6:9.01:188,9,0	./.	./.	./.	./.	./.	1/1:4,0:4:3.01:97,3,0	1/1:5,0:6:3.01:52,3,0	1/1:5,0:5:6.02:177,6,0	./.
chr10	62054357	.	TATATATATATATATAC	T	1400.59	PASS	AB=1.000;AC=27;AF=0.711;AN=38;BaseQRankSum=1.459;DP=87;FS=1.092;HRun=0;HaplotypeScore=45.3662;InbreedingCoeff=0.0994;MQ=43.82;MQ0=5;MQRankSum=-2.964;QD=22.96;ReadPosRankSum=0.964;VQSLOD=1.4670;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:1,0:1:2.98:0,3,22	./.	./.	./.	./.	1/1:8,0:8:6.02:163,6,0	0/1:2,0:2:0:0,0,0	0/1:9,0:6:28.39:28,0,394	0/0:1,0:1:3:0,3,25	1/1:2,0:2:3.46:24,3,0	./.	1/1:5,0:5:5.98:46,6,0	0/1:2,0:2:14.07:19,0,14	1/1:2,0:2:3.01:101,3,0	1/1:5,0:4:9.03:204,9,0	1/1:0,2:2:3.01:136,3,0	0/0:15,0:15:39.13:0,39,2030	0/1:8,0:8:34.11:235,0,34	0/1:5,0:4:7.68:113,0,8	./.	1/1:2,0:1:3:25,3,0	./.	./.	./.	1/1:1,1:2:6.01:157,6,0	1/1:1,0:1:2.98:22,3,0	1/1:4,1:5:5.56:223,6,0	1/1:1,0:1:2.99:24,3,0
chr10	62054359	.	TATATATATATATAC	T	1804.51	PASS	AB=1.000;AC=30;AF=0.833;AN=36;BaseQRankSum=0.199;DP=93;FS=2.762;HRun=0;HaplotypeScore=44.0821;InbreedingCoeff=0.2922;MQ=44.25;MQ0=6;MQRankSum=-3.568;QD=27.34;ReadPosRankSum=0.145;VQSLOD=1.1513;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:2,0:2:3.45:0,3,23	./.	./.	./.	./.	1/1:4,5:9:6.02:257,6,0	0/1:2,0:2:0:0,0,0	0/1:9,0:6:31.36:31,0,299	./.	1/1:2,0:2:6.02:89,6,0	./.	1/1:6,0:6:8.88:62,9,0	1/1:2,0:2:5.99:47,6,0	1/1:1,0:2:3.01:73,3,0	1/1:5,1:5:7.41:226,7,0	1/1:2,0:2:3.01:103,3,0	0/0:15,0:15:39.11:0,39,1705	1/1:8,1:9:23.87:352,24,0	1/1:6,0:5:12.01:215,12,0	./.	1/1:2,0:1:3:25,3,0	./.	./.	./.	1/1:2,0:2:6.01:125,6,0	1/1:1,0:1:3.01:52,3,0	1/1:1,4:5:5.56:236,6,0	1/1:1,0:1:2.99:24,3,0
chr10	62054431	.	TACACAC	T	3637.08	PASS	AB=1.000;AC=35;AF=0.673;AN=52;BaseQRankSum=-2.903;DP=312;FS=1.519;HRun=0;HaplotypeScore=80.0844;InbreedingCoeff=0.6718;MQ=57.65;MQ0=24;MQRankSum=2.495;QD=19.55;ReadPosRankSum=3.289;VQSLOD=3.1285;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:16,0:16:18.61:51,0,19	0/0:4,0:3:2.84:0,3,14	0/0:37,0:17:14.53:0,15,170	0/0:24,0:9:8.92:0,9,81	1/1:5,0:13:0.36:1,0,0	1/1:9,0:9:14.97:209,15,0	1/1:13,0:12:12:138,12,0	0/0:7,0:11:11.87:0,12,79	0/0:7,0:7:12.17:0,12,48	1/1:1,3:4:9.03:144,9,0	1/1:0,3:3:0.47:1,0,0	1/1:13,0:13:27.39:363,27,0	1/1:4,0:4:9.03:143,9,0	1/1:6,0:5:9.03:123,9,0	1/1:11,0:9:24.06:337,24,0	1/1:7,1:8:18.06:289,18,0	0/0:10,0:10:12.18:0,12,72	1/1:13,0:13:19.54:348,20,0	1/1:9,0:7:12.51:197,13,0	./.	1/1:24,0:22:41.45:537,41,0	0/0:1,0:11:2.43:0,2,14	./.	1/1:11,0:10:2.58:6,3,0	1/1:12,0:11:25.22:376,25,0	1/1:2,7:7:17.96:198,18,0	1/1:6,1:7:12.51:175,13,0	0/0:2,0:1:1.55:0,2,4
chr10	62055432	.	G	GT	1449.80	PASS	AB=0.971;AC=8;AF=0.143;AN=56;BaseQRankSum=-7.690;DP=552;FS=1.675;HRun=11;HaplotypeScore=62.3664;InbreedingCoeff=0.7064;MQ=65.59;MQ0=1;MQRankSum=-1.107;QD=14.21;ReadPosRankSum=-1.847;VQSLOD=3.4822;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:26:51.77:0,52,377	1/1:2,9:11:27.05:274,27,0	0/1:15,1:13:11.77:12,0,66	0/1:11,0:10:10.18:10,0,53	0/0:21,0:23:63.78:0,64,466	0/0:18,1:20:19.38:0,19,322	0/0:4,0:4:8.95:0,9,68	1/1:9,14:24:42.03:409,42,0	0/0:16,0:17:43.86:0,44,328	0/0:25,0:25:59.75:0,60,463	0/0:26,0:26:53.74:0,54,418	0/0:18,0:19:49.83:0,50,377	0/0:23,0:23:59.75:0,60,462	0/0:20,0:20:47.79:0,48,369	0/0:12,0:12:29.88:0,30,232	0/0:17,0:18:46.84:0,47,352	1/1:7,33:40:52.73:896,53,0	0/0:23,0:23:56.71:0,57,435	0/0:22,0:21:53.25:0,53,413	0/0:18,0:21:36.93:0,37,267	0/0:12,0:12:29.87:0,30,229	0/0:2,0:15:22.40:0,22,65	0/0:1,0:15:26.48:0,26,77	0/0:0,0:12:20.37:0,20,59	0/0:20,1:22:28.38:0,28,393	0/0:35,0:35:86.63:0,87,669	0/0:23,0:24:49.80:0,50,373	0/0:13,0:16:17.30:0,17,248
chr10	62056964	.	CAA	C	1500.51	PASS	AB=0.779;AC=16;AF=0.286;AN=56;BaseQRankSum=6.744;DP=520;FS=4.836;HRun=16;HaplotypeScore=80.0123;InbreedingCoeff=0.8414;MQ=81.26;MQ0=3;MQRankSum=0.684;QD=8.29;ReadPosRankSum=5.338;VQSLOD=1.1274;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:8,1:17:25.86:0,26,131	0/1:3,0:9:2.90:51,0,3	0/1:31,1:24:6.68:7,0,120	0/0:14,0:12:8.38:0,8,72	1/1:9,24:37:70.94:575,71,0	0/0:18,1:22:19.35:0,19,435	0/0:12,0:13:34.28:0,34,336	1/1:12,1:29:45.80:205,46,0	1/1:8,3:11:14.77:123,15,0	0/0:25,0:27:36.02:0,36,365	0/0:22,0:29:68.92:0,69,743	0/0:11,1:12:33:0,33,322	0/0:12,0:12:30.46:0,30,312	0/0:10,0:11:7.91:0,8,171	0/0:13,0:16:34.82:0,35,380	0/0:9,0:10:29.42:0,29,328	1/1:4,1:14:27.67:131,28,0	0/0:14,0:15:32.37:0,32,378	0/0:14,0:19:45.55:0,46,457	0/0:17,0:21:40.78:0,41,413	0/0:15,0:15:36.03:0,36,382	1/1:4,11:17:31.03:247,31,0	1/1:7,14:23:15.66:184,16,0	1/1:2,6:8:20.95:175,21,0	0/0:19,0:19:44.55:0,45,461	0/0:23,0:26:41.38:0,41,433	0/0:14,0:15:37.71:0,38,350	0/0:16,0:19:42.28:0,42,537
chr10	62057300	.	GA	G	6613.20	PASS	AB=0.775;AC=34;AF=0.607;AN=56;BaseQRankSum=9.729;DP=512;FS=16.781;HRun=10;HaplotypeScore=57.4335;InbreedingCoeff=0.8974;MQ=69.83;MQ0=1;MQRankSum=-0.961;QD=20.35;ReadPosRankSum=4.968;VQSLOD=3.9676;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:57.15:0,57,630	0/0:7,0:7:18.05:0,18,199	0/0:16,0:11:21.49:0,21,205	0/1:14,0:12:0.54:1,0,131	0/0:22,2:25:13.92:0,14,592	1/1:0,18:18:53.99:468,54,0	1/1:3,12:15:29.99:260,30,0	0/0:32,0:32:85.09:0,85,867	0/0:19,0:20:33.61:0,34,526	1/1:6,20:27:59.82:509,60,0	1/1:3,16:19:41.98:365,42,0	1/1:1,10:11:23.99:208,24,0	1/1:2,14:16:38.99:339,39,0	0/1:2,9:11:3.19:204,0,3	1/1:1,22:23:62.98:547,63,0	1/1:3,20:23:56.98:495,57,0	0/0:29,0:29:60.67:0,61,840	1/1:2,11:13:29.99:261,30,0	1/1:1,16:17:17.79:379,18,0	1/1:5,27:32:56.65:651,57,0	1/1:2,5:7:12:104,12,0	0/0:8,0:8:21.06:0,21,232	0/0:20,0:20:22.47:0,22,472	0/0:8,0:8:21.04:0,21,223	1/1:1,17:18:47.99:417,48,0	1/1:4,26:30:77.98:677,78,0	1/1:1,20:21:56.90:494,57,0	1/1:2,8:10:26.99:234,27,0
chr10	62057936	.	AAGC	A	6895.83	PASS	AB=1.000;AC=36;AF=0.643;AN=56;BaseQRankSum=1.493;DP=385;FS=15.469;HRun=0;HaplotypeScore=75.2698;InbreedingCoeff=0.7521;MQ=54.41;MQ0=34;MQRankSum=0.634;QD=31.93;ReadPosRankSum=4.898;VQSLOD=4.2158;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:22:29.46:0,29,594	0/0:4,0:4:2.20:0,2,71	0/0:37,0:8:23.15:0,23,241	0/0:28,0:15:17.35:0,17,289	0/0:9,0:7:17.89:0,18,207	1/1:2,6:7:15.05:255,15,0	1/1:3,12:13:33.07:528,33,0	0/0:13,0:10:1.40:0,1,217	0/0:21,0:20:33.02:0,33,433	1/1:1,8:9:16.17:361,16,0	1/1:0,9:9:24:331,24,0	1/1:1,10:10:27.09:458,27,0	1/1:0,15:15:36.12:611,36,0	1/1:1,9:9:18.06:291,18,0	1/1:0,13:13:33.11:560,33,0	1/1:1,7:8:21.02:325,21,0	0/0:22,0:19:13.05:0,13,239	1/1:0,5:4:6.02:102,6,0	1/1:5,0:10:23.20:351,23,0	1/1:1,7:7:20.99:290,21,0	1/1:2,28:28:58.75:970,59,0	0/1:4,0:4:4.36:4,0,77	0/0:12,0:12:4.02:0,4,204	0/1:21,0:19:2.81:3,0,263	1/1:0,11:10:24.01:372,24,0	1/1:0,13:13:39.10:629,39,0	1/1:0,10:10:24.08:406,24,0	1/1:1,0:1:3.01:47,3,0
chr10	62058171	.	A	AG	604.99	PASS	AB=0.794;AC=13;AF=0.500;AN=26;BaseQRankSum=-3.083;DP=213;FS=0.000;HRun=1;HaplotypeScore=13.2416;InbreedingCoeff=0.1556;MQ=19.62;MQ0=59;MQRankSum=-1.028;QD=9.76;ReadPosRankSum=-0.917;VQSLOD=0.5254;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	1/1:1,2:2:6.02:87,6,0	./.	./.	0/0:8,0:3:3.01:0,3,39	./.	./.	0/0:27,1:1:3.01:0,3,39	./.	0/1:5,7:8:17.91:205,0,18	1/1:4,7:7:9.03:134,9,0	0/0:6,1:2:3.01:0,3,39	0/1:6,3:4:32.73:39,0,33	./.	./.	./.	./.	./.	./.	1/1:3,5:4:5.98:65,6,0	./.	0/1:3,0:3:8.13:8,0,33	0/0:8,0:4:3.01:0,3,39	0/0:17,0:9:3.01:0,3,32	1/1:3,8:7:8.87:132,9,0	./.	1/1:2,3:3:3.01:43,3,0	./.
chr10	62058195	.	AG	A	97.65	PASS	AB=1.000;AC=15;AF=0.750;AN=20;BaseQRankSum=1.083;DP=98;FS=6.455;HRun=2;HaplotypeScore=13.0184;InbreedingCoeff=0.1341;MQ=17.56;MQ0=41;MQRankSum=0.217;QD=4.25;ReadPosRankSum=-0.938;VQSLOD=0.0775;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	1/1:1,1:1:3.01:39,3,0	./.	./.	./.	./.	./.	./.	./.	0/1:4,0:4:14.29:14,0,15	0/0:6,0:5:0.08:0,0,34	1/1:1,2:2:3.01:38,3,0	1/1:3,0:2:0.47:1,0,0	./.	./.	./.	./.	./.	./.	1/1:3,0:2:2.50:9,2,0	./.	1/1:0,1:1:3.01:39,3,0	1/1:0,1:1:3.01:39,3,0	1/1:5,1:4:0.47:1,0,0	0/0:6,0:4:1.98:0,2,17	./.	./.	./.
chr10	62058606	.	AAGC	A	983.33	PASS	AB=0.766;AC=23;AF=0.442;AN=52;BaseQRankSum=-2.252;DP=189;FS=6.226;HRun=0;HaplotypeScore=34.4170;InbreedingCoeff=0.0687;MQ=20.98;MQ0=24;MQRankSum=-0.871;QD=8.33;ReadPosRankSum=-1.472;VQSLOD=1.2603;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:5,1:5:43.99:44,0,98	1/1:1,1:1:3.01:53,3,0	0/0:31,0:2:6.02:0,6,129	0/1:27,0:0:0:0,0,0	0/0:9,0:7:14.35:0,14,120	1/1:2,3:3:3.01:50,3,0	1/1:5,1:2:2.96:19,3,0	0/0:4,1:1:3:0,3,29	0/0:8,0:5:10.80:0,11,131	0/1:3,3:4:30.16:32,0,30	1/1:2,3:4:12.03:178,12,0	0/1:4,5:7:22.26:199,0,22	0/0:2,0:2:2.56:0,3,50	1/1:1,3:3:9.03:153,9,0	0/1:8,3:9:6.10:114,0,6	0/1:3,3:6:72.18:72,0,90	0/0:4,0:2:5.81:0,6,60	1/1:3,2:4:2.04:6,2,0	0/0:2,0:2:2.60:0,3,10	0/1:5,3:8:1.40:81,0,1	0/0:1,1:1:3.01:0,3,36	1/1:4,0:3:2.80:13,3,0	./.	0/0:3,0:3:0:0,0,0	./.	0/1:4,2:4:41.65:82,0,42	0/0:0,1:1:0:0,0,0	0/1:6,2:8:29.18:29,0,225
chr10	62058684	.	CAGGAGA	C	6240.86	PASS	AB=0.866;AC=33;AF=0.635;AN=52;BaseQRankSum=-8.959;DP=528;FS=0.689;HRun=0;HaplotypeScore=119.4476;InbreedingCoeff=0.0247;MQ=42.41;MQ0=34;MQRankSum=-0.431;QD=16.21;ReadPosRankSum=3.300;VQSLOD=4.1663;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:8:21.01:0,21,224	1/1:2,3:4:2.84:52,3,0	./.	0/0:44,0:10:2.68:0,3,11	0/0:22,0:21:20.49:0,20,188	0/1:19,4:21:38.74:668,0,39	0/1:8,10:14:28.39:113,0,28	1/1:20,6:16:11.96:96,12,0	0/0:15,0:13:21.02:0,21,303	1/1:23,5:24:28.49:633,28,0	0/1:27,1:27:63.08:232,0,63	1/1:12,4:15:3.07:328,3,0	1/1:11,6:15:32.71:621,33,0	0/1:16,2:16:0.17:284,0,0	0/1:15,4:19:22.91:246,0,23	1/1:21,6:25:23.03:717,23,0	./.	1/1:16,0:13:12.85:250,13,0	0/1:10,0:8:0:0,0,0	0/1:15,2:15:27.90:131,0,28	0/1:16,1:15:27.88:460,0,28	1/1:3,0:2:3.01:37,3,0	1/1:4,0:4:8.94:104,9,0	1/1:6,0:6:12.48:127,12,0	0/1:24,1:21:59.51:248,0,60	1/1:16,7:19:0.30:379,0,0	0/1:7,11:18:37.10:48,0,37	0/1:19,2:20:66.77:466,0,67
chr10	62058924	.	TC	T	4912.04	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=0.623;DP=454;FS=6.229;HRun=1;HaplotypeScore=78.1265;InbreedingCoeff=0.9490;MQ=70.51;MQ0=5;MQRankSum=-1.019;QD=19.73;ReadPosRankSum=3.245;VQSLOD=5.0857;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:69.18:0,69,839	0/0:4,0:4:8.63:0,9,63	0/0:24,0:21:25.41:0,25,366	0/0:23,1:15:11.43:0,11,196	0/0:20,0:20:53.21:0,53,586	1/1:3,7:10:24:213,24,0	1/1:10,6:16:22.88:240,23,0	0/0:37,0:37:90.41:0,90,531	0/0:14,0:14:42.03:0,42,469	1/1:0,21:20:57.02:513,57,0	1/1:1,15:16:38.98:345,39,0	1/1:3,6:8:17.98:156,18,0	1/1:3,10:13:30.02:272,30,0	1/1:1,8:9:17.95:154,18,0	1/1:2,12:14:29.98:265,30,0	1/1:2,14:13:30.02:272,30,0	0/0:32,0:32:74.50:0,75,473	1/1:1,14:14:33.02:299,33,0	1/1:3,16:17:47.93:416,48,0	1/1:0,8:8:18.01:163,18,0	1/1:0,2:2:3:27,3,0	0/0:6,0:6:11.55:0,12,66	0/0:10,0:10:16.92:0,17,79	0/0:9,0:9:22.77:0,23,112	1/1:2,11:13:21.01:191,21,0	1/1:7,14:19:44.89:385,45,0	1/1:5,22:27:63.02:566,63,0	1/1:2,18:20:48.03:435,48,0
chr10	62058925	.	C	CT	1931.98	PASS	AB=0.718;AC=11;AF=0.196;AN=56;BaseQRankSum=-10.469;DP=456;FS=13.894;HRun=9;HaplotypeScore=89.3630;InbreedingCoeff=0.6160;MQ=71.51;MQ0=5;MQRankSum=0.496;QD=16.95;ReadPosRankSum=-2.975;VQSLOD=1.9514;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:65.93:0,66,566	0/1:1,3:4:16.83:57,0,17	0/0:25,0:22:26.95:0,27,241	0/0:24,0:15:13.98:0,14,124	0/0:21,0:21:44.97:0,45,390	0/0:9,0:9:15.14:0,15,43	0/1:16,0:16:0.54:1,0,29	1/1:4,32:36:93.22:1006,93,0	0/0:14,0:14:32.98:0,33,286	0/0:21,0:20:36.50:0,36,105	0/0:17,0:17:23.91:0,24,70	0/0:9,0:8:10.66:0,11,30	0/0:13,0:13:20.36:0,20,59	0/0:9,0:9:10.19:0,10,30	0/0:15,0:15:18.80:0,19,54	0/0:15,0:12:20.15:0,20,58	0/1:9,23:32:38:531,0,38	0/0:16,0:15:22.40:0,22,65	0/0:19,0:17:14.64:0,15,69	0/0:8,0:8:12.22:0,12,35	0/0:2,0:2:2.04:0,2,6	1/1:2,4:6:6.02:66,6,0	1/1:0,10:10:17.70:199,18,0	1/1:2,8:10:21.06:232,21,0	0/0:13,0:13:14.26:0,14,41	0/0:20,0:19:27.24:0,27,85	0/0:27,0:27:38.04:0,38,113	0/0:20,0:20:32.59:0,33,94
chr10	62059147	.	C	CT	4446.77	PASS	AB=0.714;AC=37;AF=0.661;AN=56;BaseQRankSum=-4.683;DP=550;FS=0.925;HRun=13;HaplotypeScore=66.4832;InbreedingCoeff=0.7421;MQ=67.05;MQ0=5;MQRankSum=0.157;QD=11.49;ReadPosRankSum=-1.134;VQSLOD=4.2784;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,21:32:8.65:350,9,0	0/0:6,0:6:13.45:0,13,87	0/0:24,0:10:14.46:0,14,94	0/1:14,0:10:3.33:3,0,15	1/1:6,11:17:32.83:284,33,0	1/1:4,9:14:20.86:181,21,0	1/1:4,14:19:15.77:273,16,0	0/0:26,0:25:24.54:0,25,187	0/0:15,0:17:33.66:0,34,210	1/1:6,19:25:44.78:386,45,0	1/1:9,14:23:8.18:171,8,0	1/1:3,8:11:11.16:125,11,0	0/1:2,7:9:5.51:96,0,6	1/1:7,10:17:5.58:197,6,0	1/1:8,20:28:27.03:251,27,0	1/1:4,13:18:10.24:210,10,0	0/0:28,0:33:33.72:0,34,368	1/1:4,17:21:12.29:244,12,0	1/1:14,10:25:35.28:324,35,0	1/1:3,20:22:42.86:391,43,0	1/1:5,4:8:12.01:112,12,0	0/0:2,0:10:8.83:0,9,37	0/0:6,0:19:16.52:0,17,68	0/0:9,0:25:46.02:0,46,169	1/1:2,12:14:21.02:195,21,0	1/1:11,15:26:31.19:262,31,0	1/1:9,15:27:24.63:319,25,0	0/1:3,8:11:6.44:74,0,6
chr10	62060221	.	G	GT	3685.12	PASS	AB=0.692;AC=31;AF=0.554;AN=56;BaseQRankSum=-5.503;DP=512;FS=4.274;HRun=13;HaplotypeScore=87.0247;InbreedingCoeff=0.3260;MQ=69.47;MQ0=3;MQRankSum=-0.218;QD=10.24;ReadPosRankSum=0.448;VQSLOD=3.2922;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:34:44.54:0,45,144	0/0:6,0:6:2.92:0,3,20	0/0:11,0:9:7.93:0,8,47	0/0:14,0:12:12.40:0,12,60	0/0:13,0:30:24.38:0,24,71	1/1:5,15:19:10.82:232,11,0	0/1:9,3:14:38.62:125,0,39	0/0:25,0:26:35.60:0,36,227	0/0:1,0:3:4.06:0,4,12	1/1:6,15:22:32.74:263,33,0	1/1:5,16:22:8.18:149,8,0	1/1:3,15:18:29.86:262,30,0	0/1:5,7:12:23.24:74,0,23	1/1:6,14:21:25.53:205,26,0	0/1:9,8:18:9.18:130,0,9	0/1:10,10:19:5.21:226,0,5	0/0:22,0:26:23.64:0,24,247	1/1:4,10:16:26.83:229,27,0	0/1:9,13:22:15.04:250,0,15	1/1:6,15:22:6.37:187,6,0	1/1:2,11:12:24.03:223,24,0	0/1:12,6:19:44.39:112,0,44	0/1:8,13:20:2.25:242,0,2	1/1:2,16:22:17.09:287,17,0	0/1:7,5:12:13.33:24,0,13	1/1:6,8:14:26.84:227,27,0	1/1:6,17:23:15.49:140,15,0	0/1:6,2:8:4.22:98,0,4
chr10	62060306	.	A	AC	727.09	PASS	AB=0.947;AC=7;AF=0.125;AN=56;BaseQRankSum=4.166;DP=531;FS=6.981;HRun=8;HaplotypeScore=74.3833;InbreedingCoeff=0.7532;MQ=70.45;MQ0=13;MQRankSum=-2.333;QD=9.83;ReadPosRankSum=-2.406;VQSLOD=1.4645;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:18,12:30:31.02:485,31,0	0/0:11,0:11:14.07:0,14,130	0/0:39,0:17:6.16:0,6,133	0/0:35,0:16:1.07:0,1,104	1/1:8,7:15:23.89:243,24,0	0/1:17,1:17:7.98:8,0,215	0/0:25,0:25:53.97:0,54,483	0/0:19,0:18:35.86:0,36,304	1/1:2,0:10:25.85:137,26,0	0/0:14,0:14:37.88:0,38,314	0/0:16,0:16:36.81:0,37,308	0/0:16,0:16:42:0,42,377	0/0:14,0:14:41.99:0,42,376	0/0:8,0:8:21.01:0,21,192	0/0:15,0:15:38.96:0,39,341	0/0:11,0:11:26.04:0,26,232	0/0:29,0:29:65.80:0,66,571	0/0:18,0:18:38.98:0,39,349	0/0:22,0:19:26.36:0,26,342	0/0:20,0:19:50.99:0,51,458	0/0:17,0:15:36.77:0,37,309	0/0:11,0:11:27:0,27,241	0/0:18,0:18:47.90:0,48,423	0/0:21,0:20:22.44:0,22,309	0/0:16,0:15:36:0,36,323	0/0:23,0:23:59.92:0,60,534	0/0:29,0:29:65.68:0,66,568	0/0:7,0:6:12:0,12,110
chr10	62060542	.	T	TCACACACACA	5363.24	PASS	AB=0.938;AC=45;AF=0.900;AN=50;BaseQRankSum=0.535;DP=545;FS=3.066;HRun=0;HaplotypeScore=186.0621;InbreedingCoeff=0.2399;MQ=59.32;MQ0=12;MQRankSum=-0.577;QD=11.81;ReadPosRankSum=0.663;VQSLOD=4.0649;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:40,0:38:51.80:631,0,52	1/1:2,1:4:6.02:209,6,0	./.	./.	1/1:14,0:27:11.61:116,12,0	1/1:15,0:15:3.01:44,3,0	1/1:32,0:30:18.06:393,18,0	1/1:31,0:30:18.90:306,19,0	1/1:7,0:19:12.04:202,12,0	1/1:23,0:21:22.31:547,22,0	1/1:16,0:16:2.94:44,3,0	1/1:20,0:22:3.01:130,3,0	1/1:13,0:13:9.03:286,9,0	1/1:22,0:21:12.04:254,12,0	./.	1/1:17,0:16:15.51:375,16,0	1/1:12,1:15:6.02:189,6,0	1/1:10,0:10:7.20:73,7,0	1/1:14,0:14:9.03:293,9,0	1/1:18,0:18:9.03:233,9,0	0/1:10,0:8:0:0,0,0	0/1:12,1:13:0:1,0,0	1/1:9,2:15:0.47:2,0,0	0/1:20,5:29:0.01:1,0,0	0/1:10,0:9:0:0,0,0	1/1:22,0:21:19.88:597,20,0	1/1:13,0:13:8.92:286,9,0	1/1:3,0:3:6.02:151,6,0
chr10	62065365	.	TAC	T	17714.19	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=12.083;DP=1129;FS=5.459;HRun=0;HaplotypeScore=172.7411;InbreedingCoeff=0.9997;MQ=60.73;MQ0=27;MQRankSum=0.464;QD=24.95;ReadPosRankSum=2.673;VQSLOD=5.7359;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:54,1:55:81.77:0,82,2180	0/0:19,0:18:38.87:0,39,618	0/0:28,0:16:32.13:0,32,502	0/0:35,0:26:63.59:0,64,842	0/0:26,0:26:51.17:0,51,822	1/1:16,16:29:69.16:853,69,0	1/1:28,20:48:99:1240,99,0	0/0:35,0:30:73.48:0,73,1166	0/0:42,0:39:78.25:0,78,1273	1/1:4,45:49:99:1566,126,0	1/1:1,23:24:33.04:425,33,0	1/1:4,51:55:96.31:1235,96,0	1/1:9,33:42:73.02:960,73,0	1/1:7,30:36:72.23:926,72,0	1/1:8,53:58:99:1505,117,0	1/1:8,37:43:84.26:1081,84,0	0/0:36,0:36:86.27:0,86,1491	1/1:3,20:23:45.62:573,46,0	1/1:8,14:18:42.12:519,42,0	1/1:4,41:43:63.20:810,63,0	1/1:37,59:89:99:2727,210,0	0/0:47,0:46:72.07:0,72,1184	0/0:36,0:36:63.15:0,63,993	0/0:57,3:58:26.13:0,26,2067	1/1:3,26:28:39.13:502,39,0	1/1:15,46:59:69.06:1618,69,0	1/1:5,22:28:60.09:771,60,0	1/1:3,10:12:33.04:404,33,0
chr10	62065558	.	T	TCA	33732.57	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-7.025;DP=1378;FS=5.608;HRun=0;HaplotypeScore=189.5422;InbreedingCoeff=0.9071;MQ=50.91;MQ0=34;MQRankSum=6.710;QD=25.55;ReadPosRankSum=4.492;VQSLOD=5.4076;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,61:69:99:1887,111,0	1/1:0,15:16:23.73:408,24,0	0/0:23,0:10:18.03:0,18,202	0/0:35,0:11:19.38:0,19,244	1/1:11,14:21:53.95:836,54,0	1/1:7,30:33:39.13:664,39,0	1/1:8,40:50:57.17:970,57,0	1/1:11,28:39:81.18:1210,81,0	1/1:12,56:67:99:2037,120,0	1/1:6,65:70:99:2765,169,0	1/1:2,35:36:56.48:944,56,0	1/1:14,45:58:51.30:1439,51,0	1/1:16,18:32:66.06:1004,66,0	1/1:26,34:60:99:1723,103,0	1/1:13,51:66:65.91:1123,66,0	1/1:6,45:52:95.44:1630,95,0	1/1:6,40:49:51.45:1156,51,0	1/1:5,33:39:2.92:810,3,0	1/1:14,18:28:56.69:793,57,0	1/1:13,16:28:75.25:1224,75,0	1/1:24,106:144:99:2346,137,0	1/1:20,28:46:99:1734,111,0	1/1:2,22:24:33.11:561,33,0	1/1:10,58:71:99:1709,102,0	1/1:6,28:33:35.51:611,36,0	1/1:9,50:57:99:2122,128,0	1/1:6,31:38:69.24:1158,69,0	1/1:0,21:21:51.17:867,51,0
chr10	62065634	.	T	TCACTCACA	19053.66	PASS	AB=0.747;AC=47;AF=0.839;AN=56;BaseQRankSum=-5.368;DP=1119;FS=3.101;HRun=0;HaplotypeScore=337.5178;InbreedingCoeff=0.5072;MQ=45.46;MQ0=14;MQRankSum=0.920;QD=18.96;ReadPosRankSum=3.156;VQSLOD=3.4221;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:20,10:30:24:441,24,0	1/1:11,3:14:23.38:634,23,0	0/0:41,0:15:8.73:0,9,111	0/0:41,0:22:10.23:0,10,343	0/0:8,21:31:5.30:0,5,154	1/1:15,5:20:14.48:230,14,0	1/1:30,2:27:23.91:427,24,0	1/1:32,0:29:41.90:693,42,0	1/1:36,17:50:59.53:1436,60,0	1/1:44,15:59:99:3290,118,0	1/1:13,8:20:8.37:114,8,0	1/1:50,15:64:41.57:1030,42,0	1/1:11,34:48:21.07:874,21,0	1/1:43,14:57:49.68:872,50,0	1/1:40,20:57:20.66:386,21,0	1/1:26,10:38:20.14:600,20,0	1/1:20,2:22:6.18:564,6,0	0/1:24,3:25:4.06:615,0,4	1/1:31,2:26:19.37:438,19,0	0/1:24,11:33:41.43:547,0,41	1/1:82,5:83:20.99:400,21,0	0/1:17,38:60:68.86:99,0,69	1/1:30,8:37:35.97:442,36,0	1/1:32,7:39:19.57:551,20,0	1/1:21,4:25:11.55:214,12,0	1/1:52,12:58:82.33:2633,82,0	1/1:17,9:26:35.14:1016,35,0	1/1:14,2:16:20.53:509,21,0
chr10	62065739	.	T	TAC	31281.31	PASS	AB=0.982;AC=45;AF=0.804;AN=56;BaseQRankSum=-11.064;DP=1534;FS=16.367;HRun=0;HaplotypeScore=354.6984;InbreedingCoeff=0.8739;MQ=46.30;MQ0=30;MQRankSum=4.381;QD=23.95;ReadPosRankSum=1.167;VQSLOD=4.2360;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:33,38:70:99:2321,138,0	1/1:18,0:17:12.03:328,12,0	0/0:57,0:10:21.07:0,21,264	0/0:45,0:11:20.45:0,20,272	1/1:18,11:29:63.01:978,63,0	1/1:22,7:29:48.13:750,48,0	1/1:66,13:73:77.63:1280,78,0	1/1:16,12:25:54.13:799,54,0	1/1:30,31:60:99:2296,141,0	1/1:74,28:101:99:3248,150,0	1/1:15,6:21:21.04:299,21,0	1/1:60,16:75:77.66:1480,78,0	1/1:58,16:73:99:1810,116,0	1/1:51,21:72:90.30:1491,90,0	1/1:54,15:68:87.04:1428,87,0	1/1:46,11:57:99:1705,107,0	0/1:53,1:54:54.91:1435,0,55	1/1:28,5:31:14.52:1041,15,0	1/1:30,6:32:25.81:858,26,0	1/1:35,15:49:59.90:930,60,0	1/1:145,19:148:99:2310,139,0	0/0:35,0:35:72.49:0,72,919	0/0:27,0:26:45.01:0,45,591	0/0:64,0:64:99:0,120,1567	1/1:31,18:49:57.10:904,57,0	1/1:57,13:65:99:2053,100,0	1/1:28,6:32:41.71:614,42,0	1/1:22,6:28:29.76:924,30,0
chr10	62065746	.	ACT	A	14529.61	PASS	AB=0.936;AC=38;AF=0.679;AN=56;BaseQRankSum=-1.094;DP=1458;FS=1.148;HRun=0;HaplotypeScore=389.9897;InbreedingCoeff=0.3267;MQ=46.15;MQ0=26;MQRankSum=3.066;QD=11.70;ReadPosRankSum=3.134;VQSLOD=3.8539;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:61,8:70:99:107,0,912	1/1:16,1:15:12.83:222,13,0	0/0:51,0:9:21:0,21,343	0/0:43,0:10:20.92:0,21,402	0/1:26,1:27:66.30:66,0,385	1/1:28,1:29:30.64:446,31,0	1/1:59,13:67:9.08:649,9,0	0/1:31,0:29:88.90:359,0,89	0/1:53,7:60:99:203,0,748	1/1:76,14:88:99:1775,140,0	0/1:20,1:21:42.97:142,0,43	1/1:63,7:69:25.86:825,26,0	1/1:61,8:68:99:1094,112,0	1/1:57,7:64:82.75:810,83,0	1/1:60,9:66:82.93:848,83,0	1/1:45,7:52:55.43:956,55,0	0/1:50,3:53:15.12:747,0,15	0/1:32,2:32:2.08:558,0,2	0/1:26,4:28:55.46:439,0,55	1/1:42,7:48:43.71:545,44,0	1/1:145,15:143:12.85:1190,13,0	0/0:31,0:31:51.17:0,51,832	0/0:28,0:27:47.12:0,47,564	0/0:63,0:63:99:0,132,1551	1/1:41,2:44:41.35:540,41,0	1/1:61,7:62:2.56:1108,3,0	1/1:25,7:31:9.02:343,9,0	1/1:29,0:28:44.47:557,44,0
chr10	62065752	.	TCA	T	17112.72	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=0.759;DP=1399;FS=30.071;HRun=0;HaplotypeScore=371.5389;InbreedingCoeff=0.9035;MQ=46.09;MQ0=25;MQRankSum=-0.062;QD=14.82;ReadPosRankSum=1.825;VQSLOD=4.0100;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:70,0:70:99:0,144,2246	1/1:11,4:13:19.60:216,20,0	0/0:45,0:7:6.02:0,6,98	0/0:39,0:8:2.95:0,3,49	0/0:29,0:29:27.20:0,27,888	1/1:20,5:25:30.04:365,30,0	1/1:60,14:69:50.94:617,51,0	1/1:10,17:25:51.03:563,51,0	0/0:61,0:60:99:0,122,1859	1/1:64,17:79:99:1268,122,0	1/1:16,5:21:33.07:379,33,0	1/1:55,9:64:48.69:680,49,0	1/1:57,8:64:60.86:831,61,0	1/1:54,8:62:65.73:713,66,0	1/1:59,11:67:49.53:794,50,0	1/1:41,7:48:5.75:708,6,0	1/1:51,3:54:44.27:1037,44,0	1/1:30,5:33:28.84:664,29,0	1/1:24,5:25:41.95:500,42,0	1/1:31,13:43:47.50:549,48,0	1/1:146,12:142:99:1931,155,0	1/1:12,17:28:51.63:636,52,0	1/1:13,17:29:54.09:653,54,0	1/1:22,42:64:99:1463,117,0	1/1:31,12:43:60.70:689,61,0	1/1:45,16:55:74.95:1047,75,0	1/1:20,7:25:33.36:391,33,0	1/1:25,3:27:19.40:420,19,0
chr10	62066660	.	C	CACAG	3082.32	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-9.152;DP=696;FS=0.577;HRun=0;HaplotypeScore=110.3447;InbreedingCoeff=0.9924;MQ=68.60;MQ0=4;MQRankSum=-1.296;QD=40.03;ReadPosRankSum=1.770;VQSLOD=4.0821;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:54.16:0,54,865	0/0:12,0:12:30.09:0,30,470	0/0:29,0:22:42.12:0,42,630	0/0:25,0:24:37.63:0,38,550	0/0:39,0:39:84.27:0,84,1362	0/0:24,0:24:51.17:0,51,842	0/0:20,0:20:14.22:0,14,585	0/0:32,0:31:57.17:0,57,870	0/0:18,0:18:45.14:0,45,718	0/0:31,0:31:72.23:0,72,1141	0/0:20,0:20:57.19:0,57,941	0/0:28,0:28:66.21:0,66,1060	0/0:16,0:16:45.15:0,45,742	0/0:23,0:23:51.16:0,51,816	0/0:28,0:28:54.17:0,54,866	0/0:29,0:29:69.24:0,69,1136	0/0:17,0:17:36.10:0,36,566	0/0:36,0:36:84.27:0,84,1348	0/0:23,0:23:36.12:0,36,592	0/0:26,0:26:57.19:0,57,934	0/0:26,0:26:51.14:0,51,791	1/1:9,24:34:63.22:1534,63,0	1/1:4,15:20:33.11:809,33,0	1/1:5,17:20:36.12:882,36,0	0/0:24,0:24:60.20:0,60,984	0/0:37,0:37:84.27:0,84,1361	0/0:21,0:21:45.15:0,45,743	0/0:9,0:9:27.07:0,27,403
chr10	62066925	.	TA	T	1316.80	PASS	AB=0.885;AC=7;AF=0.125;AN=56;BaseQRankSum=6.780;DP=667;FS=2.892;HRun=10;HaplotypeScore=68.3191;InbreedingCoeff=0.8237;MQ=74.89;MQ0=1;MQRankSum=0.142;QD=14.63;ReadPosRankSum=1.056;VQSLOD=4.0916;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,1:41:94.26:0,94,1260	1/1:0,12:12:32.99:286,33,0	0/0:20,0:20:33.07:0,33,351	0/0:9,0:9:9.02:0,9,95	0/0:43,1:44:76.16:0,76,1034	0/0:19,1:20:31.08:0,31,557	0/0:16,1:17:19.02:0,19,425	1/1:4,17:21:50.96:437,51,0	0/0:25,0:25:63.17:0,63,697	0/0:32,0:32:69.15:0,69,736	0/0:21,0:21:57.13:0,57,615	0/0:19,1:20:25.06:0,25,489	0/0:16,0:16:39.11:0,39,431	0/0:26,0:26:72.13:0,72,773	0/0:24,0:24:63.15:0,63,681	0/0:24,0:24:72.09:0,72,763	1/1:3,31:34:83.98:729,84,0	0/1:20,3:23:12.03:12,0,531	0/0:26,0:27:68.96:0,69,710	0/0:18,0:18:48.13:0,48,531	0/0:32,0:32:87.22:0,87,954	0/0:21,1:22:31.08:0,31,553	0/0:23,2:25:16.86:0,17,610	0/0:17,0:17:45.12:0,45,498	0/0:24,0:24:72.13:0,72,755	0/0:33,0:33:87.17:0,87,937	0/0:29,0:29:75.20:0,75,830	0/0:10,0:10:30.06:0,30,321
chr10	62067135	.	AAGG	A	20006.15	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=10.075;DP=782;FS=0.560;HRun=0;HaplotypeScore=122.9665;InbreedingCoeff=0.9994;MQ=85.19;MQ0=0;MQRankSum=-7.809;QD=43.68;ReadPosRankSum=3.208;VQSLOD=6.6153;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:63,0:63:99:0,178,3944	0/0:15,0:15:45.15:0,45,1019	0/0:29,0:29:56.02:0,56,1314	0/0:30,0:30:78.23:0,78,1547	0/0:24,0:24:72.23:0,72,1597	1/1:1,19:20:48.16:794,48,0	1/1:1,30:31:75.26:1277,75,0	0/0:28,0:28:72.22:0,72,1519	0/0:33,0:33:99:0,99,2140	1/1:2,28:30:84.27:1366,84,0	1/1:1,22:23:60.07:905,60,0	1/1:0,20:20:57.20:972,57,0	1/1:0,31:31:87.30:1473,87,0	1/1:0,29:29:69.24:1177,69,0	1/1:0,32:32:93.32:1561,93,0	1/1:0,37:37:99:1688,99,0	0/0:32,0:32:96.32:0,96,2126	1/1:3,19:22:45.12:737,45,0	1/1:1,30:31:90.27:1481,90,0	1/1:1,27:28:78.14:1236,78,0	1/1:0,44:44:99:1868,111,0	0/0:15,0:15:42.14:0,42,964	0/0:18,0:18:50.75:0,51,1068	0/0:37,0:37:99:0,105,2330	1/1:0,15:15:39.13:653,39,0	1/1:1,31:32:93.27:1489,93,0	1/1:1,25:26:57.20:972,57,0	1/1:0,7:7:21.07:358,21,0
chr10	62067689	.	T	TTG	2664.50	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=-1.163;DP=584;FS=1.532;HRun=0;HaplotypeScore=81.3538;InbreedingCoeff=0.8962;MQ=79.06;MQ0=0;MQRankSum=-1.142;QD=18.38;ReadPosRankSum=-0.154;VQSLOD=3.7275;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,117,1435	1/1:11,0:11:14.98:153,15,0	0/0:21,0:21:47.53:0,48,537	0/0:25,0:24:28.15:0,28,284	0/0:23,0:23:54.12:0,54,651	0/0:18,0:18:48.14:0,48,632	0/0:28,0:28:78.21:0,78,995	1/1:27,0:27:52.08:564,52,0	0/1:24,0:24:10.55:11,0,165	0/0:21,0:21:45.12:0,45,544	0/0:14,0:14:39.10:0,39,482	0/0:16,0:16:45.12:0,45,564	0/0:17,0:17:45.14:0,45,593	0/0:14,0:14:36.10:0,36,457	0/0:17,0:17:45.14:0,45,592	0/0:24,0:24:66.17:0,66,844	1/1:18,0:18:27.08:303,27,0	0/0:15,0:15:44.78:0,45,543	0/0:21,0:21:48.07:0,48,570	0/0:18,0:18:41.79:0,42,536	0/0:43,0:43:99:0,117,1433	1/1:4,15:19:18.06:309,18,0	1/1:2,15:17:24.05:413,24,0	1/1:2,27:29:66.06:1100,66,0	0/0:15,0:15:36.09:0,36,443	0/0:20,0:20:42.09:0,42,486	0/0:19,0:19:54.13:0,54,694	0/0:5,0:5:12.04:0,12,162
chr10	62067694	.	T	TGTG	2640.39	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=-0.617;DP=581;FS=2.083;HRun=0;HaplotypeScore=98.2382;InbreedingCoeff=0.7153;MQ=78.38;MQ0=0;MQRankSum=-1.815;QD=17.84;ReadPosRankSum=0.781;VQSLOD=3.6004;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,129,1949	1/1:1,8:9:15.05:326,15,0	0/0:22,0:22:62.72:0,63,867	0/0:26,0:25:34.59:0,35,486	0/0:22,0:22:63.15:0,63,928	0/0:16,0:16:48.16:0,48,839	0/0:29,0:29:81.21:0,81,1309	1/1:5,17:27:66.02:1110,66,0	0/1:24,0:24:0.95:1,0,311	0/0:17,0:17:48.13:0,48,716	0/0:12,0:12:36.11:0,36,578	0/0:17,0:17:45.13:0,45,732	0/0:19,0:19:48.14:0,48,789	0/0:16,0:16:38.80:0,39,605	0/0:16,0:16:48.15:0,48,791	0/0:24,0:24:69.17:0,69,1099	1/1:2,16:21:27.09:614,27,0	0/0:15,0:15:44.81:0,45,717	0/0:20,0:20:54.13:0,54,791	0/0:14,0:15:42.13:0,42,707	0/0:44,0:44:99:0,129,1947	0/1:20,0:20:6.35:124,0,6	0/1:17,0:17:24.26:164,0,24	1/1:30,0:30:17.04:468,17,0	0/0:15,0:15:42.07:0,42,600	0/0:18,0:18:48.09:0,48,634	0/0:18,0:18:54.13:0,54,888	0/0:5,0:5:12.04:0,12,211
chr10	62068763	.	TC	T	1883.80	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=5.807;DP=600;FS=0.000;HRun=2;HaplotypeScore=67.4477;InbreedingCoeff=0.8194;MQ=75.60;MQ0=10;MQRankSum=-1.677;QD=18.29;ReadPosRankSum=0.743;VQSLOD=3.4822;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,105,1219	1/1:0,4:4:6.49:77,6,0	0/0:60,0:23:34.26:0,34,324	0/1:36,0:18:5.77:6,0,230	0/0:24,0:24:67.38:0,67,743	0/0:17,0:17:42.48:0,42,458	0/0:19,0:19:52.58:0,53,625	1/1:12,14:26:66.94:764,67,0	0/0:21,0:21:36.79:0,37,648	0/0:23,0:23:32.32:0,32,609	0/0:10,0:10:27.95:0,28,314	0/0:20,0:20:60.16:0,60,742	0/0:16,0:16:39.41:0,39,433	0/0:22,0:22:66.08:0,66,729	0/0:21,0:21:48.27:0,48,642	0/0:13,0:13:37.64:0,38,431	1/1:1,35:36:93.23:1175,93,0	0/0:29,1:30:42.78:0,43,699	0/0:21,0:21:56.83:0,57,658	0/0:14,0:14:36.06:0,36,409	0/0:19,0:19:44.59:0,45,567	0/0:15,0:15:42:0,42,448	0/0:13,0:13:36.08:0,36,416	0/0:19,0:19:51.57:0,52,593	0/0:10,0:10:27.86:0,28,289	0/0:27,0:27:75.09:0,75,828	0/0:22,0:22:50.26:0,50,663	0/0:4,0:4:10.26:0,10,106
chr10	62068970	.	A	AG	23088.65	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-8.447;DP=696;FS=5.726;HRun=4;HaplotypeScore=64.2481;InbreedingCoeff=0.9754;MQ=80.58;MQ0=0;MQRankSum=-9.383;QD=34.93;ReadPosRankSum=6.624;VQSLOD=4.6748;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:4,40:44:99:1518,111,0	1/1:1,5:6:15.05:199,15,0	0/0:16,0:16:41.85:0,42,429	0/0:19,0:19:50.36:0,50,490	1/1:1,24:25:60.11:795,60,0	1/1:1,22:23:60.20:820,60,0	1/1:2,42:44:99:1518,111,0	1/1:3,29:32:86.61:1120,87,0	1/1:0,26:26:69.23:944,69,0	1/1:1,30:31:84.28:1147,84,0	1/1:3,24:27:66.22:902,66,0	1/1:2,30:32:81.01:1107,81,0	1/1:2,20:22:54.18:739,54,0	1/1:2,24:26:72.24:985,72,0	1/1:2,27:29:69.23:944,69,0	1/1:0,22:22:57.19:780,57,0	1/1:0,36:36:99:1395,102,0	1/1:0,23:23:63.21:861,63,0	1/1:3,15:18:48.09:619,48,0	1/1:1,13:14:30.10:410,30,0	1/1:4,41:45:99:1477,108,0	1/1:1,17:18:45:567,45,0	1/1:1,10:11:27.09:369,27,0	1/1:1,32:33:90.30:1231,90,0	1/1:0,13:12:30.10:405,30,0	1/1:1,29:30:87.29:1189,87,0	1/1:2,24:26:66.19:884,66,0	1/1:0,4:4:12.04:164,12,0
chr10	62069340	.	G	GA	985.83	PASS	AB=0.965;AC=9;AF=0.161;AN=56;BaseQRankSum=1.696;DP=569;FS=5.784;HRun=9;HaplotypeScore=131.5322;InbreedingCoeff=0.6521;MQ=52.60;MQ0=17;MQRankSum=-5.230;QD=8.80;ReadPosRankSum=-0.258;VQSLOD=1.5742;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:14,14:27:52.92:553,53,0	0/0:9,0:9:20.95:0,21,175	0/0:59,0:19:25.96:0,26,189	0/0:51,1:10:4.19:0,4,105	1/1:17,8:25:42.84:404,43,0	0/0:14,0:14:29.80:0,30,251	0/0:16,0:15:23.33:0,23,188	0/0:36,0:34:38.47:0,38,369	1/1:8,5:13:17.07:165,17,0	0/0:14,0:13:32.04:0,32,275	0/0:15,0:15:32.89:0,33,273	0/0:15,0:15:15.97:0,16,171	0/0:12,0:12:4.80:0,5,65	0/0:9,0:9:11.18:0,11,121	0/0:15,0:13:32.92:0,33,284	0/0:20,0:20:42.34:0,42,355	0/0:37,0:36:69.89:0,70,616	0/1:20,1:20:2.53:3,0,184	0/0:25,0:24:61.17:0,61,572	0/0:21,0:20:47.65:0,48,395	0/1:9,0:8:0.75:1,0,44	0/0:10,0:10:21.87:0,22,181	0/0:20,0:19:53.07:0,53,430	0/0:8,0:8:13.53:0,14,126	0/0:14,0:13:26.21:0,26,214	0/0:19,0:20:48.98:0,49,426	0/0:16,0:16:22.23:0,22,183	0/1:15,1:16:1.75:2,0,224
chr10	62069352	.	A	AAAAC	10630.37	PASS	AB=1.000;AC=45;AF=0.804;AN=56;BaseQRankSum=-3.847;DP=596;FS=0.603;HRun=0;HaplotypeScore=126.8730;InbreedingCoeff=0.4756;MQ=50.90;MQ0=20;MQRankSum=-5.704;QD=23.21;ReadPosRankSum=2.968;VQSLOD=4.4677;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:27:13.99:161,0,14	0/1:8,0:8:0.96:1,0,4	0/0:72,0:20:28.05:0,28,195	0/1:63,0:11:2.68:3,0,105	0/1:24,0:24:18.99:129,0,19	1/1:15,0:15:30.10:572,30,0	1/1:18,0:18:25.24:482,25,0	0/0:27,0:26:15.51:0,16,98	1/1:17,0:17:9.16:147,9,0	1/1:13,0:13:30.05:477,30,0	1/1:14,0:14:33.02:508,33,0	1/1:16,0:16:8.47:439,8,0	1/1:9,0:9:9.03:170,9,0	1/1:9,0:9:20.55:325,21,0	1/1:15,0:13:33.11:628,33,0	1/1:18,2:20:41.24:731,41,0	0/0:39,0:38:5.68:0,6,104	0/1:20,0:19:1.25:401,0,1	1/1:26,1:25:56.96:742,57,0	1/1:18,1:18:33:685,33,0	1/1:13,0:12:5.98:48,6,0	1/1:9,1:10:23.72:361,24,0	1/1:21,1:21:57.05:964,57,0	1/1:8,0:9:26.97:382,27,0	1/1:14,0:13:15.34:332,15,0	1/1:22,3:24:53.71:895,54,0	1/1:14,0:14:1.17:354,1,0	1/1:15,1:16:37.37:694,37,0
chr10	62069356	.	C	CAAACA	14846.81	PASS	AB=0.877;AC=44;AF=0.786;AN=56;BaseQRankSum=-7.163;DP=633;FS=11.545;HRun=0;HaplotypeScore=129.8765;InbreedingCoeff=0.5898;MQ=51.05;MQ0=17;MQRankSum=-3.162;QD=30.36;ReadPosRankSum=2.719;VQSLOD=4.2525;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:33:45.39:66,0,45	0/0:11,0:11:9.74:0,10,31	0/0:68,0:19:29.14:0,29,212	0/1:61,0:12:2.84:3,0,122	0/1:25,0:25:41.71:46,0,42	1/1:0,16:16:30.10:863,30,0	1/1:5,14:23:32.41:684,32,0	0/0:24,0:24:19.57:0,20,136	1/1:5,0:16:8.09:127,8,0	1/1:4,0:18:42.26:645,42,0	1/1:2,0:18:35.99:679,36,0	1/1:3,10:18:23.37:675,23,0	1/1:0,5:9:9.03:258,9,0	1/1:2,8:11:21.05:500,21,0	1/1:1,13:14:33.11:949,33,0	1/1:7,9:19:41.63:990,42,0	0/0:39,0:38:43.31:0,43,180	0/1:3,5:20:6.31:617,0,6	1/1:8,15:27:63.43:969,63,0	1/1:4,12:18:33:968,33,0	1/1:4,8:12:9.02:134,9,0	1/1:8,4:11:30.05:553,30,0	1/1:8,12:21:57.07:1306,57,0	1/1:3,5:9:27.01:571,27,0	1/1:2,6:14:20.56:505,21,0	1/1:10,13:29:62.74:1256,63,0	1/1:2,8:17:21.14:539,21,0	1/1:4,10:15:39.11:945,39,0
chr10	62069358	.	A	AAAC	4409.59	PASS	AB=1.000;AC=35;AF=0.625;AN=56;BaseQRankSum=0.304;DP=624;FS=1.010;HRun=0;HaplotypeScore=150.4268;InbreedingCoeff=-0.1956;MQ=50.94;MQ0=18;MQRankSum=-4.423;QD=9.15;ReadPosRankSum=10.763;VQSLOD=2.7107;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:33,0:32:29.10:384,29,0	1/1:0,11:11:18.05:366,18,0	0/0:68,0:19:29.27:0,29,222	0/0:62,0:13:6.13:0,6,79	0/1:28,0:28:37.68:327,0,38	1/1:16,0:16:23.31:86,23,0	1/1:23,0:23:5.76:70,6,0	1/1:1,24:25:45.08:677,45,0	1/1:16,0:16:4.46:250,4,0	0/1:17,0:17:33.58:42,0,34	0/1:17,0:17:36.49:50,0,36	0/1:18,0:17:21.52:47,0,22	1/1:9,0:9:6.72:27,7,0	1/1:11,0:11:7.43:45,7,0	1/1:14,0:13:21.87:80,22,0	0/1:19,0:19:33.68:54,0,34	1/1:6,34:40:50.23:1397,50,0	0/1:19,0:18:19.15:30,0,19	0/1:26,0:22:43.97:44,0,110	0/1:16,0:15:18.73:73,0,19	0/0:11,0:10:8:0,8,49	0/1:13,0:12:37.28:42,0,37	0/1:23,0:22:11.12:104,0,11	0/1:9,0:9:27.06:36,0,27	0/1:16,0:15:13.19:41,0,13	0/1:28,0:27:42.01:42,0,100	0/1:19,0:19:3.79:61,0,4	0/1:15,0:15:20.55:37,0,21
chr10	62069385	.	AAAC	A	1371.45	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=2.898;DP=558;FS=4.485;HRun=0;HaplotypeScore=142.3074;InbreedingCoeff=0.9866;MQ=57.79;MQ0=7;MQRankSum=-4.034;QD=28.57;ReadPosRankSum=2.426;VQSLOD=4.0938;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:45.11:0,45,835	0/0:10,0:10:27.09:0,27,550	0/0:28,0:10:24.03:0,24,382	0/0:31,0:12:26.94:0,27,471	0/0:21,0:21:60.16:0,60,1205	0/0:12,0:12:20.92:0,21,377	0/0:26,0:26:51.13:0,51,946	0/0:19,0:19:48.16:0,48,874	0/0:16,0:16:30.06:0,30,549	0/0:17,0:17:48.14:0,48,953	0/0:19,0:19:39.13:0,39,798	0/0:18,0:17:36.12:0,36,760	0/0:13,0:13:24.08:0,24,484	0/0:14,0:14:24.04:0,24,427	0/0:16,0:15:39.13:0,39,804	0/0:21,0:21:48.16:0,48,983	0/0:36,0:35:80.98:0,81,1519	0/0:21,0:20:16.56:0,17,627	0/0:29,0:27:60.20:0,60,1145	0/0:19,0:19:45.07:0,45,808	0/0:8,0:8:18.06:0,18,336	1/1:5,9:13:33.11:505,33,0	1/1:6,18:23:44.91:687,45,0	1/1:1,9:10:21.07:321,21,0	0/0:20,0:19:45.15:0,45,867	0/0:24,0:24:59.94:0,60,1160	0/0:21,0:21:33.11:0,33,679	0/0:12,0:12:30.08:0,30,590
chr10	62069612	.	T	TTC	16529.58	PASS	AB=0.598;AC=47;AF=0.839;AN=56;BaseQRankSum=-7.485;DP=689;FS=0.664;HRun=0;HaplotypeScore=89.3666;InbreedingCoeff=0.3581;MQ=76.93;MQ0=5;MQRankSum=-1.283;QD=26.49;ReadPosRankSum=2.252;VQSLOD=5.8605;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,32:38:15.24:1190,15,0	1/1:3,0:10:18:158,18,0	0/0:37,0:33:19.17:0,19,248	0/0:28,0:22:17.30:0,17,114	1/1:4,15:19:33.11:515,33,0	1/1:8,12:20:3.16:540,3,0	0/1:13,17:31:34.91:620,0,35	1/1:24,0:28:15.01:144,15,0	1/1:11,11:22:27.09:425,27,0	1/1:6,17:23:18.14:708,18,0	1/1:1,12:14:36.05:522,36,0	1/1:8,19:25:39.60:791,40,0	0/1:7,12:20:1.86:526,0,2	1/1:7,11:19:33.11:524,33,0	1/1:4,27:32:33.27:1019,33,0	0/1:8,17:25:14.74:758,0,15	1/1:23,0:25:17.84:142,18,0	1/1:6,15:21:6.17:587,6,0	1/1:4,16:20:48.10:649,48,0	1/1:4,18:22:48.16:741,48,0	1/1:4,26:30:27.25:923,27,0	1/1:3,12:15:27.09:431,27,0	1/1:8,16:25:36.12:563,36,0	0/1:5,26:31:2.71:935,0,3	1/1:8,23:31:33.20:985,33,0	1/1:10,24:35:42.03:964,42,0	1/1:6,19:25:48.16:767,48,0	0/1:5,10:15:5.84:401,0,6
chr10	62069623	.	T	TCTCTCTCT	2743.10	PASS	AB=1.000;AC=8;AF=0.143;AN=56;BaseQRankSum=-8.656;DP=670;FS=2.838;HRun=0;HaplotypeScore=207.5056;InbreedingCoeff=0.7387;MQ=69.47;MQ0=5;MQRankSum=-3.632;QD=25.17;ReadPosRankSum=-7.776;VQSLOD=0.9703;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:81.33:0,81,560	1/1:10,0:10:24.08:976,24,0	0/0:32,0:28:22.75:0,23,499	0/0:22,0:17:16.51:0,17,210	0/0:22,0:21:15.65:0,16,139	0/0:19,0:19:37.84:0,38,264	0/0:28,0:28:49.67:0,50,429	1/1:27,0:27:36.11:1286,36,0	0/0:18,0:18:26.20:0,26,146	0/0:29,0:28:15.71:0,16,254	0/0:17,0:17:13.27:0,13,128	0/0:27,0:25:52.42:0,52,349	0/0:23,0:23:40.96:0,41,306	0/0:18,0:18:31.95:0,32,174	0/0:33,0:33:66.87:0,67,420	0/0:24,0:24:25.84:0,26,387	1/1:18,4:23:15.05:518,15,0	0/0:19,0:19:40.72:0,41,280	0/1:18,0:18:0.79:1,0,127	0/0:21,0:21:29.13:0,29,210	0/0:31,0:31:61.06:0,61,389	0/0:14,0:14:26.12:0,26,140	0/0:22,0:22:19.22:0,19,155	0/0:32,0:32:67.01:0,67,485	0/0:31,0:30:65.89:0,66,426	0/1:31,0:31:99:108,0,238	0/0:23,0:23:46.44:0,46,249	0/0:13,0:13:29.13:0,29,218
chr10	62071336	.	G	GAC	1390.97	PASS	AB=0.603;AC=4;AF=0.071;AN=56;BaseQRankSum=-8.280;DP=682;FS=0.000;HRun=0;HaplotypeScore=105.8035;InbreedingCoeff=0.4661;MQ=69.24;MQ0=4;MQRankSum=-1.498;QD=21.40;ReadPosRankSum=-3.268;VQSLOD=3.1999;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:39.12:0,39,475	1/1:4,8:12:21.07:331,21,0	0/0:29,0:23:27.08:0,27,321	0/0:34,0:26:24.59:0,25,301	0/0:25,0:25:66.21:0,66,806	0/0:25,0:25:48.15:0,48,586	0/0:25,0:27:56.84:0,57,651	0/1:14,19:34:10.17:812,0,10	0/0:19,0:19:45.11:0,45,549	0/0:28,0:28:63.15:0,63,753	0/0:27,0:27:69.10:0,69,791	0/0:18,0:18:48.15:0,48,586	0/0:21,0:21:54.14:0,54,642	0/0:22,0:24:44.63:0,45,481	0/0:29,0:29:69.13:0,69,842	0/0:21,0:21:48.15:0,48,586	0/1:5,14:17:9.57:362,0,10	0/0:20,1:21:2.30:0,2,513	0/0:17,0:18:23.90:0,24,260	0/0:27,0:28:69.05:0,69,818	0/0:38,0:38:72.28:0,72,1111	0/0:12,0:12:26.90:0,27,330	0/0:15,0:15:32.94:0,33,380	0/0:24,0:26:47.81:0,48,539	0/0:27,0:27:57.17:0,57,684	0/0:38,0:38:90.24:0,90,1069	0/0:21,0:22:41.96:0,42,490	0/0:5,0:6:11.87:0,12,124
chr10	62071391	.	GAC	G	2603.23	PASS	AB=0.800;AC=33;AF=0.611;AN=54;BaseQRankSum=-5.174;DP=612;FS=8.407;HRun=0;HaplotypeScore=118.0033;InbreedingCoeff=0.5060;MQ=51.08;MQ0=35;MQRankSum=1.339;QD=6.62;ReadPosRankSum=5.157;VQSLOD=2.0446;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:37.80:0,38,397	1/1:7,0:7:2.84:14,3,0	0/0:8,0:2:2.98:0,3,22	0/0:11,0:7:3:0,3,29	0/0:32,0:32:15.44:0,15,131	1/1:10,13:24:26.55:277,27,0	1/1:15,9:20:3.48:148,3,0	./.	0/0:20,0:19:13.89:0,14,117	0/1:30,4:31:31.52:62,0,32	1/1:13,6:16:12:133,12,0	1/1:9,5:12:12.03:131,12,0	1/1:11,1:10:3.01:33,3,0	1/1:6,16:21:21.01:229,21,0	1/1:7,13:22:32.17:264,32,0	1/1:5,10:14:30.08:332,30,0	0/0:21,0:18:3.39:0,3,9	0/1:14,10:22:3.49:144,0,3	1/1:12,4:10:6.02:66,6,0	1/1:14,10:19:11.99:118,12,0	1/1:36,19:49:35.38:338,35,0	0/0:9,0:14:5.99:0,6,68	0/0:2,0:8:5.99:0,6,50	0/0:11,0:30:0.20:0,0,41	1/1:17,2:20:8.56:154,9,0	0/1:28,2:31:9.95:157,0,10	1/1:8,2:10:6.02:66,6,0	1/1:3,5:9:11.87:113,12,0
chr10	62071393	.	C	CAG	5110.52	PASS	AB=0.936;AC=38;AF=0.679;AN=56;BaseQRankSum=-2.138;DP=618;FS=11.043;HRun=0;HaplotypeScore=113.2753;InbreedingCoeff=0.3441;MQ=51.00;MQ0=35;MQRankSum=3.508;QD=9.39;ReadPosRankSum=6.494;VQSLOD=3.5539;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:24,23:47:8.51:9,0,366	0/0:8,0:8:10.54:0,11,77	0/0:9,0:2:2.98:0,3,22	0/0:11,0:6:14.98:0,15,126	0/1:32,1:33:44.08:215,0,44	1/1:24,0:24:42.66:284,43,0	1/1:26,0:22:31.62:307,32,0	0/0:24,0:23:16.53:0,17,265	0/1:20,2:21:6.91:267,0,7	0/1:33,1:30:50.57:292,0,51	1/1:18,1:16:34.04:236,34,0	1/1:14,1:13:26.06:189,26,0	1/1:10,2:10:29.59:222,30,0	1/1:21,1:21:31.31:220,31,0	1/1:25,0:22:36.95:236,37,0	1/1:14,1:14:35.16:184,35,0	0/0:22,0:19:32.01:0,32,218	0/1:24,1:23:0.44:187,0,0	1/1:16,0:10:14.45:98,14,0	1/1:24,0:19:37.58:266,38,0	1/1:55,2:50:85.57:608,86,0	0/1:14,0:14:24.66:94,0,25	1/1:9,0:8:11.92:89,12,0	0/1:28,0:26:17.80:65,0,18	1/1:20,0:19:32.42:278,32,0	1/1:34,2:31:48.15:545,48,0	0/1:11,0:11:18.22:133,0,18	1/1:9,0:9:16.45:88,16,0
chr10	62071419	.	CACACACACACAA	C	1069.32	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-2.347;DP=667;FS=12.120;HRun=0;HaplotypeScore=227.8674;InbreedingCoeff=0.9712;MQ=60.18;MQ0=31;MQRankSum=-0.218;QD=24.87;ReadPosRankSum=-0.608;VQSLOD=1.6421;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:35:81.82:0,82,2263	1/1:1,8:9:8.55:120,9,0	0/0:28,0:15:44.90:0,45,524	0/0:26,0:14:34.50:0,35,518	0/0:35,0:35:64.48:0,64,1605	0/0:30,0:30:71.38:0,71,1569	0/0:30,0:26:67.01:0,67,1147	1/1:17,0:16:37.64:375,38,0	0/0:22,0:21:50.95:0,51,1058	0/0:36,0:32:83.35:0,83,1401	0/0:13,0:10:24.03:0,24,660	0/0:21,0:19:48.12:0,48,985	0/0:11,0:9:27.02:0,27,344	0/0:24,0:23:41.82:0,42,869	0/0:31,0:28:61.29:0,61,1234	0/0:16,0:15:45.13:0,45,1375	1/1:16,1:15:36.63:711,37,0	0/0:30,0:28:42.42:0,42,1060	0/0:18,0:14:45.09:0,45,776	0/0:18,0:13:30.48:0,30,652	0/0:54,0:47:97.53:0,98,2327	0/0:16,0:16:22.24:0,22,512	0/0:14,0:13:32.84:0,33,644	0/0:32,0:30:36.88:0,37,670	0/0:23,0:22:63.17:0,63,1338	0/0:33,0:28:84.10:0,84,1650	0/0:18,0:18:49.89:0,50,804	0/0:9,0:9:18.04:0,18,557
chr10	62072232	.	TTTTG	T	10165.20	PASS	AB=0.977;AC=40;AF=0.714;AN=56;BaseQRankSum=-0.745;DP=518;FS=4.573;HRun=0;HaplotypeScore=121.5787;InbreedingCoeff=0.8465;MQ=63.55;MQ0=13;MQRankSum=-5.557;QD=32.37;ReadPosRankSum=-0.522;VQSLOD=4.5829;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:91.19:0,91,1985	1/1:4,2:6:10.24:161,10,0	0/0:40,0:16:20.41:0,20,440	0/0:54,0:26:26.85:0,27,542	0/0:24,0:21:42.14:0,42,840	1/1:10,6:16:14.61:500,15,0	1/1:5,3:8:17.99:250,18,0	1/1:8,15:23:50.86:691,51,0	0/0:11,0:11:27.09:0,27,662	1/1:15,8:22:63.16:1002,63,0	1/1:5,7:12:33.09:484,33,0	1/1:6,5:11:30.09:473,30,0	1/1:11,3:14:36:482,36,0	1/1:5,6:11:27.08:440,27,0	1/1:7,8:14:42.04:632,42,0	1/1:12,4:15:39.12:614,39,0	0/1:20,1:21:8.65:292,0,9	1/1:12,6:15:39.04:550,39,0	1/1:13,3:13:20.34:318,20,0	1/1:1,17:17:45.08:681,45,0	1/1:9,2:9:19.88:293,20,0	0/1:13,0:13:2.93:3,0,69	0/0:14,0:14:21.22:0,21,178	0/0:18,0:18:32.16:0,32,256	1/1:7,11:17:48.16:793,48,0	1/1:9,9:18:45.08:645,45,0	1/1:16,5:21:50.69:672,51,0	1/1:2,3:5:12.04:190,12,0
chr10	62072235	.	TG	T	1811.25	PASS	AB=0.959;AC=30;AF=0.536;AN=56;BaseQRankSum=6.917;DP=531;FS=14.429;HRun=1;HaplotypeScore=127.0366;InbreedingCoeff=0.2329;MQ=60.19;MQ0=15;MQRankSum=-6.618;QD=5.79;ReadPosRankSum=1.448;VQSLOD=-0.6660;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:87:0,87,1306	0/1:7,0:7:25.11:25,0,25	0/0:42,1:15:39.62:0,40,397	0/0:51,3:23:26.69:0,27,447	0/0:24,0:21:62.61:0,63,703	0/1:16,0:16:13.51:125,0,14	0/1:8,1:9:55.34:55,0,70	0/1:20,0:20:60.85:61,0,69	0/0:11,0:11:30.07:0,30,387	1/1:24,1:24:45.73:219,46,0	1/1:13,0:13:16.26:86,16,0	1/1:13,0:13:5.66:114,6,0	0/1:13,2:14:13.70:158,0,14	1/1:14,0:14:11.13:90,11,0	1/1:16,1:16:31.71:141,32,0	0/1:15,3:17:4.79:182,0,5	0/1:20,0:20:23.57:24,0,51	0/1:17,1:15:44.52:69,0,45	0/1:15,0:12:39.07:63,0,39	1/1:19,0:18:22.67:105,23,0	1/1:10,1:9:11.50:52,11,0	0/0:12,0:12:30.05:0,30,340	0/0:12,0:12:33.08:0,33,409	0/0:18,0:18:42.05:0,42,522	1/1:17,0:16:26.59:122,27,0	0/1:18,0:18:22.25:108,0,22	1/1:20,3:23:3.28:182,3,0	1/1:5,0:5:2.49:24,2,0
chr10	62072236	.	G	GTT	6295.06	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=1.975;DP=547;FS=5.099;HRun=6;HaplotypeScore=130.0768;InbreedingCoeff=0.9567;MQ=59.35;MQ0=17;MQRankSum=-4.459;QD=19.25;ReadPosRankSum=-1.900;VQSLOD=1.9332;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:45:63.34:0,63,1222	1/1:6,0:7:17.68:161,18,0	0/0:46,0:15:16.09:0,16,302	0/0:57,0:23:7.55:0,8,383	0/0:23,0:20:45.12:0,45,596	1/1:16,0:16:39.26:361,39,0	1/1:9,0:9:20.61:134,21,0	1/1:20,1:20:48.02:592,48,0	0/0:10,0:10:27.09:0,27,372	1/1:26,1:26:56.82:700,57,0	1/1:14,0:14:17.82:182,18,0	1/1:13,0:13:30.32:211,30,0	1/1:15,0:14:31.97:244,32,0	1/1:13,1:14:29.30:254,29,0	1/1:18,0:17:24.97:231,25,0	1/1:18,0:17:42.32:288,42,0	1/1:21,2:21:24.75:318,25,0	1/1:17,2:16:16.81:252,17,0	1/1:16,0:13:24.79:216,25,0	1/1:19,1:19:35.25:394,35,0	1/1:11,1:10:12.46:245,12,0	0/0:10,0:10:20.96:0,21,197	0/0:11,0:11:29.59:0,30,249	0/0:18,0:18:40.08:0,40,335	1/1:16,2:17:48.16:696,48,0	1/1:18,0:18:37.71:347,38,0	1/1:24,0:24:50.84:421,51,0	1/1:4,0:5:6.49:49,6,0
chr10	62072237	.	TTTG	T	5937.96	PASS	AB=1.000;AC=37;AF=0.661;AN=56;BaseQRankSum=4.567;DP=552;FS=24.422;HRun=0;HaplotypeScore=132.3973;InbreedingCoeff=0.7270;MQ=58.92;MQ0=18;MQRankSum=-4.652;QD=18.05;ReadPosRankSum=1.925;VQSLOD=2.4852;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:78.92:0,79,1762	0/1:7,0:7:13.82:44,0,14	0/0:48,0:15:17.87:0,18,364	0/0:59,0:24:16.77:0,17,490	0/0:23,0:19:48.14:0,48,857	1/1:16,0:16:11.41:297,11,0	1/1:9,0:9:19.86:226,20,0	1/1:21,0:20:38.33:301,38,0	0/0:10,0:10:30.10:0,30,621	1/1:26,1:26:26.56:417,27,0	0/1:14,0:14:3.14:336,0,3	1/1:13,0:13:35.95:387,36,0	1/1:14,2:15:29.29:332,29,0	1/1:15,0:15:22.94:286,23,0	1/1:18,0:17:41.57:399,42,0	1/1:15,3:17:30.84:408,31,0	0/1:22,0:20:31.81:68,0,32	1/1:19,0:16:37.04:351,37,0	1/1:15,0:12:17.12:194,17,0	1/1:20,0:19:41.58:373,42,0	1/1:12,0:10:13:127,13,0	0/0:10,0:10:2.89:0,3,33	0/0:11,0:11:12.70:0,13,65	0/0:18,0:18:11.77:0,12,104	1/1:17,1:17:16.04:441,16,0	1/1:20,0:20:19.49:351,19,0	1/1:24,0:24:49.74:456,50,0	1/1:5,0:5:12.03:143,12,0
chr10	62072239	.	TG	T	3864.86	PASS	AB=0.898;AC=37;AF=0.661;AN=56;BaseQRankSum=5.614;DP=559;FS=16.866;HRun=1;HaplotypeScore=127.5714;InbreedingCoeff=0.6387;MQ=57.13;MQ0=18;MQRankSum=-4.406;QD=11.54;ReadPosRankSum=2.128;VQSLOD=0.9289;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:81.68:0,82,1267	1/1:3,4:7:13.14:116,13,0	0/0:48,2:16:24.50:0,25,307	0/0:58,1:23:4.66:0,5,361	0/0:22,0:18:48.13:0,48,643	1/1:15,0:15:1.82:158,2,0	0/1:7,2:9:27:88,0,27	1/1:24,1:24:44.36:355,44,0	0/0:11,0:11:29.76:0,30,409	1/1:25,2:26:25.15:318,25,0	0/1:12,2:14:14.34:164,0,14	1/1:9,4:13:34.39:219,34,0	1/1:18,0:17:2.92:173,3,0	1/1:14,1:15:14.43:146,14,0	1/1:15,3:17:39.83:231,40,0	1/1:17,1:16:6.14:192,6,0	1/1:8,14:20:31.47:315,31,0	1/1:17,2:16:34.97:223,35,0	1/1:11,4:12:6.15:101,6,0	1/1:20,0:19:43.32:265,43,0	1/1:10,2:10:10.15:89,10,0	0/0:8,0:8:15.93:0,16,75	0/0:11,0:11:25.55:0,26,129	0/0:18,0:18:35.04:0,35,185	0/1:20,0:19:21.59:177,0,22	1/1:17,3:20:15.66:197,16,0	1/1:17,6:23:17.04:265,17,0	1/1:4,1:5:11.61:71,12,0
chr10	62072244	.	TTG	T	4486.80	PASS	AB=0.981;AC=37;AF=0.661;AN=56;BaseQRankSum=4.585;DP=596;FS=12.683;HRun=0;HaplotypeScore=132.3810;InbreedingCoeff=-0.0246;MQ=52.87;MQ0=22;MQRankSum=-3.324;QD=9.95;ReadPosRankSum=5.688;VQSLOD=3.8013;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:42,2:44:51.07:93,0,51	1/1:8,0:8:19.20:124,19,0	0/0:62,0:15:14.71:0,15,221	0/0:70,0:21:26.40:0,26,160	0/1:21,0:17:21.95:22,0,70	0/1:15,0:15:17.51:175,0,18	0/1:8,0:8:37.96:101,0,38	1/1:27,0:26:41.08:246,41,0	0/0:12,0:12:27.15:0,27,295	0/1:29,0:28:12.83:231,0,13	0/1:12,1:13:20.84:166,0,21	1/1:14,0:13:25.63:258,26,0	0/1:17,0:16:57.23:153,0,57	1/1:13,1:14:2.76:129,3,0	1/1:23,0:22:17.90:245,18,0	0/1:18,0:16:47.76:223,0,48	1/1:25,0:23:38.96:329,39,0	1/1:18,0:15:17.46:198,17,0	0/1:19,1:17:22.80:86,0,23	1/1:23,0:22:40.15:269,40,0	0/1:11,0:9:11.53:60,0,12	1/1:8,0:8:20.80:151,21,0	1/1:10,0:10:27.52:186,28,0	1/1:17,0:17:41.76:271,42,0	0/1:19,0:18:86.01:191,0,86	0/1:19,1:20:7.38:184,0,7	0/1:23,1:24:1.18:309,0,1	1/1:4,1:5:11.83:87,12,0
chr10	62072245	.	TG	T	4229.14	PASS	AB=0.943;AC=40;AF=0.714;AN=56;BaseQRankSum=6.502;DP=597;FS=9.410;HRun=1;HaplotypeScore=126.6765;InbreedingCoeff=0.2522;MQ=52.39;MQ0=22;MQRankSum=-6.441;QD=9.32;ReadPosRankSum=1.525;VQSLOD=1.9155;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:41.11:0,41,257	1/1:6,2:8:19.78:148,20,0	0/0:63,2:15:16.24:0,16,171	0/1:66,3:20:9.83:10,0,84	0/0:21,0:17:18.96:0,19,174	0/1:14,0:15:10.99:169,0,11	0/1:6,2:8:16.98:76,0,17	1/1:24,1:24:49.23:301,49,0	0/0:12,0:12:9.55:0,10,194	1/1:31,1:31:8.94:313,9,0	0/1:12,1:13:19.50:127,0,20	1/1:11,3:13:28.19:210,28,0	0/1:17,0:16:38.29:132,0,38	1/1:15,0:15:7.25:118,7,0	1/1:20,3:22:14.83:190,15,0	0/1:17,1:16:36.45:184,0,36	1/1:20,4:22:44.63:417,45,0	1/1:16,2:15:11.76:162,12,0	1/1:18,2:17:5.06:110,5,0	1/1:23,1:23:37.97:278,38,0	0/1:9,1:8:3.85:43,0,4	1/1:8,0:8:21.62:140,22,0	1/1:10,0:10:27.86:180,28,0	1/1:17,0:17:43.15:292,43,0	0/1:19,0:18:55.44:134,0,55	1/1:18,2:20:1.96:162,2,0	1/1:18,4:22:15.22:264,15,0	1/1:5,0:5:11.39:68,11,0
chr10	62072246	.	G	GT	3215.66	PASS	AB=0.890;AC=39;AF=0.696;AN=56;BaseQRankSum=0.146;DP=605;FS=0.000;HRun=14;HaplotypeScore=130.2086;InbreedingCoeff=0.4929;MQ=49.87;MQ0=24;MQRankSum=-2.377;QD=7.29;ReadPosRankSum=-2.248;VQSLOD=1.6646;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:44:47.25:0,47,152	0/1:8,0:8:5.89:6,0,13	0/1:68,0:13:2.92:3,0,48	0/0:67,0:20:3.24:0,3,66	0/0:8,0:17:18.26:0,18,53	1/1:8,7:15:15.52:222,16,0	1/1:2,6:8:23.97:201,24,0	1/1:23,0:23:8.36:45,8,0	0/0:9,0:12:23.27:0,23,125	1/1:16,16:31:13.75:251,14,0	1/1:5,7:13:12.02:192,12,0	1/1:8,6:13:11.17:189,11,0	1/1:8,9:16:16.57:238,17,0	1/1:7,8:15:8.07:157,8,0	1/1:8,15:22:12.12:209,12,0	0/1:9,9:16:3.36:203,0,3	0/1:23,0:22:5.26:5,0,19	0/1:13,5:15:3.21:171,0,3	1/1:13,10:20:15.24:233,15,0	1/1:16,6:23:1:166,1,0	1/1:7,4:8:5.33:51,5,0	0/0:7,0:7:4.75:0,5,15	0/0:9,0:10:3.20:0,3,14	1/1:15,0:17:3.92:33,4,0	1/1:18,0:17:44.32:270,44,0	1/1:9,10:22:10.04:133,10,0	1/1:17,6:23:27.79:327,28,0	1/1:3,3:5:10.55:83,11,0
chr10	62072251	.	T	TG	471.66	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=3.738;DP=623;FS=1.513;HRun=0;HaplotypeScore=139.5937;InbreedingCoeff=0.2540;MQ=49.99;MQ0=27;MQRankSum=-6.752;QD=4.17;ReadPosRankSum=5.038;VQSLOD=3.4599;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:86.96:0,87,688	0/0:7,0:7:17.78:0,18,136	0/0:72,0:15:20.94:0,21,209	0/0:80,0:21:12.53:0,13,229	0/0:22,0:18:50.77:0,51,390	0/0:16,0:16:7.78:0,8,125	1/1:8,0:8:9.34:25,9,0	0/0:21,0:20:44.47:0,44,282	0/0:13,0:13:38.99:0,39,413	0/0:33,0:32:42.24:0,42,380	0/1:14,0:14:3.41:3,0,56	0/1:15,0:14:5.71:6,0,108	0/1:18,0:17:15.14:15,0,85	0/1:15,0:15:4.80:5,0,32	0/0:23,0:22:18.33:0,18,148	0/0:17,0:15:5.29:0,5,137	0/0:24,0:22:46.62:0,47,376	0/0:18,0:15:6.19:0,6,152	0/0:24,0:21:10.83:0,11,191	0/0:24,0:23:22.37:0,22,222	0/0:8,0:5:2.04:0,2,33	0/0:7,0:7:4.41:0,4,94	0/0:6,0:6:2.19:0,2,93	0/0:22,0:22:32.99:0,33,206	1/1:3,16:18:34.60:543,35,0	0/0:21,0:21:28.13:0,28,230	0/1:24,0:24:5.16:5,0,142	0/0:9,0:8:5.65:0,6,38
chr10	62072253	.	TTTTTTTTCTTTTCTCTTTTTTC	T	1292.88	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=1.711;DP=623;FS=25.182;HRun=0;HaplotypeScore=312.7906;InbreedingCoeff=0.8949;MQ=49.94;MQ0=28;MQRankSum=-2.316;QD=38.03;ReadPosRankSum=-1.467;VQSLOD=1.0694;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:80.01:0,80,5469	0/0:7,0:7:15.05:0,15,913	0/0:73,0:15:31.35:0,31,506	0/0:81,0:21:2.18:0,2,573	0/0:22,0:18:33.11:0,33,2493	0/0:16,0:16:33.95:0,34,2303	0/0:8,0:8:24.08:0,24,1334	0/0:20,0:19:22.08:0,22,1518	0/0:15,0:15:34.47:0,34,1667	0/0:33,0:32:65.15:0,65,2813	0/0:14,0:14:36.12:0,36,2404	0/0:16,0:15:40.65:0,41,2231	0/0:17,0:16:37.95:0,38,2449	0/0:14,0:14:24.08:0,24,1454	0/0:23,0:22:39.13:0,39,2539	0/0:16,0:14:39.10:0,39,2524	0/0:23,0:21:46.40:0,46,2590	0/0:19,0:16:38.80:0,39,2412	0/0:24,0:21:31.81:0,32,2509	0/0:24,0:23:39.64:0,40,2075	0/0:9,0:6:9.03:0,9,537	1/1:5,3:7:17.78:687,18,0	1/1:5,1:6:13.71:410,14,0	1/1:18,2:20:28.87:334,29,0	0/0:18,0:17:45.06:0,45,2339	0/0:21,0:21:31.45:0,31,2132	0/0:25,0:25:64.47:0,64,3467	0/0:9,0:8:21.07:0,21,1157
chr10	62072265	.	TCTC	T	248.50	PASS	AB=0.949;AC=10;AF=0.179;AN=56;BaseQRankSum=6.073;DP=585;FS=67.703;HRun=0;HaplotypeScore=136.4293;InbreedingCoeff=0.4879;MQ=47.14;MQ0=19;MQRankSum=-6.137;QD=2.48;ReadPosRankSum=-1.636;VQSLOD=-0.2909;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:43:90.27:0,90,1880	0/0:6,0:6:3.42:0,3,227	0/0:63,0:11:10.91:0,11,262	0/0:63,0:12:4.63:0,5,198	0/0:18,0:16:36.11:0,36,796	0/1:14,0:14:3.77:4,0,514	0/0:12,0:12:31.47:0,31,519	0/1:16,2:17:30.18:30,0,736	0/0:18,0:18:38.53:0,39,731	0/0:25,0:24:52.03:0,52,987	0/0:14,0:14:34.01:0,34,461	0/0:14,0:13:31.50:0,32,466	0/0:19,0:18:42.13:0,42,819	0/1:15,2:17:28.73:29,0,223	0/0:24,0:23:42.14:0,42,811	0/0:21,0:19:34.16:0,34,808	0/0:25,1:24:23.16:0,23,795	0/0:21,0:20:22.92:0,23,742	0/1:21,0:20:1.53:2,0,956	0/0:21,1:20:17.24:0,17,595	0/0:9,0:6:9.02:0,9,185	1/1:8,0:7:14.44:107,14,0	1/1:8,0:8:19.27:162,19,0	1/1:6,8:14:11.46:65,11,0	0/0:17,0:16:37.87:0,38,511	0/0:18,0:18:47.47:0,47,814	0/0:22,0:22:42.69:0,43,998	0/0:8,0:7:21.06:0,21,350
chr10	62073270	.	ACTT	A	18683.43	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=3.033;DP=658;FS=0.595;HRun=0;HaplotypeScore=109.8946;InbreedingCoeff=0.9999;MQ=74.11;MQ0=0;MQRankSum=-7.240;QD=49.69;ReadPosRankSum=4.403;VQSLOD=6.7693;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:60,0:60:99:0,181,4251	0/0:13,0:13:39.10:0,39,908	0/0:15,0:15:44.98:0,45,960	0/0:18,0:18:51.05:0,51,1012	0/0:18,0:18:51.18:0,51,1257	1/1:0,19:19:51.17:950,51,0	1/1:0,33:33:90.31:1677,90,0	0/0:30,0:30:90.31:0,90,2174	0/0:23,0:23:69.18:0,69,1575	1/1:0,26:25:75.23:1317,75,0	1/1:0,19:19:48.16:894,48,0	1/1:0,21:21:54.19:1005,54,0	1/1:0,11:11:33.11:615,33,0	1/1:0,31:31:84.24:1528,84,0	1/1:0,28:28:75.21:1361,75,0	1/1:0,15:15:39.13:727,39,0	0/0:32,0:32:96.27:0,96,2240	1/1:0,15:15:39.09:691,39,0	1/1:0,25:25:72.24:1283,72,0	1/1:0,18:18:48.05:816,48,0	1/1:0,38:38:99:1919,105,0	0/0:27,0:27:78.27:0,78,1892	0/0:17,0:17:51.16:0,51,1168	0/0:29,0:29:87.30:0,87,2110	1/1:0,21:21:57.15:1019,57,0	1/1:0,24:24:69.19:1209,69,0	1/1:0,19:19:51.17:946,51,0	1/1:0,13:13:39.13:727,39,0
chr10	62074248	.	GA	G	2665.74	PASS	AB=0.706;AC=36;AF=0.643;AN=56;BaseQRankSum=3.465;DP=514;FS=1.097;HRun=16;HaplotypeScore=61.2638;InbreedingCoeff=-0.0169;MQ=70.37;MQ0=1;MQRankSum=-0.867;QD=5.81;ReadPosRankSum=4.098;VQSLOD=2.5892;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,17:29:34.15:203,34,0	0/1:2,8:10:1.58:102,0,2	0/1:21,0:11:6.46:6,0,63	0/1:17,0:12:2.04:2,0,19	1/1:9,15:25:11:166,11,0	0/1:9,15:25:16.12:133,0,16	1/1:6,15:22:18.05:214,18,0	0/1:19,9:27:10.60:117,0,11	1/1:6,15:22:11.82:163,12,0	0/1:7,7:14:26.96:83,0,27	0/1:12,7:19:1.05:90,0,1	0/1:8,7:16:24.88:88,0,25	1/1:11,1:12:8.44:49,8,0	0/1:9,8:18:44.35:44,0,63	1/1:4,16:20:41.09:251,41,0	0/1:7,9:18:15.66:121,0,16	0/1:6,8:15:12.04:100,0,12	1/1:6,7:15:2.11:111,2,0	0/1:6,3:10:31.65:43,0,32	0/1:7,14:23:3.64:137,0,4	1/1:9,1:10:5.69:36,6,0	0/0:15,0:15:18.18:0,18,213	0/0:16,2:18:14.54:0,15,217	0/0:21,1:22:26.39:0,26,303	1/1:1,4:5:8.81:54,9,0	0/1:10,6:16:28.84:54,0,29	1/1:4,18:25:28.65:287,29,0	1/1:12,11:23:29.33:179,29,0
chr10	62074742	.	T	TTTTTTG	12805.83	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-4.389;DP=500;FS=8.003;HRun=0;HaplotypeScore=107.8128;InbreedingCoeff=0.8911;MQ=55.49;MQ0=8;MQRankSum=-8.766;QD=37.55;ReadPosRankSum=0.439;VQSLOD=4.1731;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:57.08:0,57,1013	1/1:1,0:3:9.03:220,9,0	0/0:23,0:9:3.45:0,3,22	0/0:14,0:4:2.99:0,3,24	0/0:25,0:25:42.10:0,42,801	1/1:14,3:17:27.07:665,27,0	1/1:13,2:15:21.07:455,21,0	1/1:32,0:30:30.07:393,30,0	0/0:18,0:18:24.08:0,24,455	1/1:18,8:26:36.11:1072,36,0	1/1:8,7:15:27.09:762,27,0	1/1:7,7:14:24.08:757,24,0	1/1:3,2:5:6.02:191,6,0	1/1:8,4:12:24.08:679,24,0	1/1:12,4:17:24.08:642,24,0	1/1:8,4:12:21.06:563,21,0	1/1:13,0:16:23.95:390,24,0	1/1:14,3:15:24.02:526,24,0	1/1:22,4:23:27.06:714,27,0	1/1:11,5:17:27.07:687,27,0	1/1:10,0:10:6.02:128,6,0	0/0:21,0:21:48.16:0,48,928	0/0:15,0:15:15.05:0,15,289	0/0:16,0:16:24.08:0,24,438	1/1:9,10:19:42.14:1272,42,0	1/1:20,3:20:33.11:808,33,0	1/1:15,6:21:33.11:955,33,0	1/1:15,8:23:36.59:929,37,0
chr10	62074793	.	C	CT	11418.71	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-4.954;DP=456;FS=0.000;HRun=7;HaplotypeScore=75.1999;InbreedingCoeff=0.9750;MQ=55.77;MQ0=2;MQRankSum=1.081;QD=27.38;ReadPosRankSum=3.787;VQSLOD=5.4225;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,34:36:93.15:1102,93,0	1/1:1,10:11:30.09:362,30,0	0/0:20,0:12:28.19:0,28,240	0/0:18,1:11:30.76:0,31,248	1/1:1,20:22:57:650,57,0	1/1:1,13:14:36.11:435,36,0	1/1:1,9:10:21.06:254,21,0	1/1:8,17:23:51.14:604,51,0	1/1:0,14:14:39.12:471,39,0	1/1:5,12:17:36.11:435,36,0	1/1:5,11:16:30.05:346,30,0	1/1:5,7:12:21.06:254,21,0	1/1:1,5:6:15.05:181,15,0	1/1:0,10:10:30.09:362,30,0	1/1:1,10:11:24.07:290,24,0	1/1:2,8:10:24.07:290,24,0	1/1:7,17:23:45.11:544,45,0	1/1:2,8:10:19.29:283,19,0	1/1:7,9:15:24.07:290,24,0	1/1:0,16:16:42.09:491,42,0	1/1:1,10:12:27.04:310,27,0	1/1:2,21:23:60.18:725,60,0	1/1:1,10:11:27.08:326,27,0	1/1:0,21:21:45.14:543,45,0	1/1:7,17:24:39.12:471,39,0	1/1:2,15:17:45.14:543,45,0	1/1:3,18:21:54.16:642,54,0	1/1:2,6:8:18.06:217,18,0
chr10	62074882	.	GTTTTTTCTTTTTTTCTTT	G	686.81	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=3.948;DP=471;FS=4.682;HRun=0;HaplotypeScore=207.2220;InbreedingCoeff=0.6554;MQ=62.28;MQ0=6;MQRankSum=-1.432;QD=11.08;ReadPosRankSum=-0.953;VQSLOD=2.4712;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:41:99:0,105,8140	0/0:7,0:7:9.03:0,9,695	0/0:27,0:13:1.96:0,2,150	0/1:24,0:11:5.17:5,0,239	0/0:23,0:23:45.15:0,45,3100	0/0:13,0:13:30.10:0,30,2374	0/0:10,0:10:21.07:0,21,1546	0/0:25,0:25:39.13:0,39,2251	0/0:12,0:12:33.11:0,33,2597	0/0:20,0:20:39.09:0,39,2623	0/0:13,0:13:30.10:0,30,1925	0/0:15,0:15:24.08:0,24,1769	0/0:6,0:6:6.02:0,6,390	0/0:9,0:9:18.06:0,18,1430	0/0:11,0:11:24.08:0,24,1873	0/0:10,0:10:21.07:0,21,1458	0/0:31,0:31:81.28:0,81,6113	0/0:19,0:19:45.14:0,45,2489	0/0:19,0:19:33.11:0,33,2264	0/0:16,0:16:36.12:0,36,2403	0/0:15,0:15:24.08:0,24,2016	1/1:11,2:13:6:287,6,0	1/1:9,1:10:2.99:143,3,0	1/1:10,5:15:13.45:375,13,0	0/0:16,0:16:30.09:0,30,1842	0/0:21,0:21:39.13:0,39,2636	0/0:17,0:17:45.15:0,45,3603	0/0:12,0:11:27.09:0,27,1715
chr10	62075354	.	CTAT	C	134.07	PASS	AB=0.960;AC=3;AF=0.054;AN=56;BaseQRankSum=3.066;DP=304;FS=4.520;HRun=0;HaplotypeScore=44.7783;InbreedingCoeff=0.2415;MQ=50.95;MQ0=44;MQRankSum=-1.768;QD=4.97;ReadPosRankSum=-0.845;VQSLOD=0.5832;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:16:29.96:0,30,399	0/0:4,0:3:9.03:0,9,144	0/0:42,0:8:20.74:0,21,219	0/0:31,0:12:22.53:0,23,501	0/0:4,0:4:3.01:0,3,49	0/0:9,0:7:21.07:0,21,327	0/0:10,0:10:17.96:0,18,281	0/0:10,0:8:24.08:0,24,413	0/0:8,0:8:20.10:0,20,300	0/0:9,0:6:18.06:0,18,297	0/0:3,0:3:6.01:0,6,59	0/0:11,0:10:26.98:0,27,365	0/0:10,0:10:23.92:0,24,277	0/0:8,0:8:17.90:0,18,252	0/0:6,0:5:13.60:0,14,200	0/0:7,0:7:18.05:0,18,273	0/1:23,1:24:99:150,0,628	0/0:9,0:7:1.29:0,1,302	0/0:15,0:7:11.44:0,11,171	0/0:1,0:1:3.01:0,3,40	0/0:15,0:13:12.46:0,12,164	0/0:2,0:2:6.02:0,6,97	0/0:1,0:1:3:0,3,25	0/0:10,3:13:33.53:0,34,476	0/0:4,0:3:9.03:0,9,154	0/0:14,0:5:14.94:0,15,251	0/0:13,0:11:30.10:0,30,560	1/1:3,0:2:6.02:77,6,0
chr10	62075357	.	T	TCACCAC	2346.20	PASS	AC=30;AF=1.000;AN=30;DP=303;FS=0.000;HRun=0;HaplotypeScore=59.7551;InbreedingCoeff=-0.1059;MQ=47.88;MQ0=46;QD=13.33;VQSLOD=1.4687;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,4:16:3.95:89,4,0	./.	./.	./.	./.	1/1:7,2:7:6.02:192,6,0	1/1:10,0:10:6.01:77,6,0	./.	1/1:8,0:8:9:141,9,0	./.	./.	1/1:7,3:10:3.48:89,3,0	1/1:6,3:9:12.04:367,12,0	1/1:3,5:8:9.92:290,10,0	1/1:7,0:6:2.63:26,3,0	1/1:5,2:8:7.84:197,8,0	1/1:24,0:24:24.55:368,25,0	1/1:10,0:8:9.01:150,9,0	./.	./.	1/1:16,0:14:6.49:133,6,0	./.	./.	1/1:12,0:12:6.49:167,6,0	./.	1/1:14,0:5:3.01:44,3,0	1/1:12,0:10:3.01:91,3,0	./.
chr10	62075768	.	AGT	A	117.53	PASS	AB=0.970;AC=20;AF=0.385;AN=52;BaseQRankSum=4.150;DP=370;FS=0.000;HRun=0;HaplotypeScore=84.4875;InbreedingCoeff=0.1713;MQ=63.98;MQ0=8;MQRankSum=-2.359;QD=0.65;ReadPosRankSum=-2.181;VQSLOD=1.0996;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:25:0:0,0,0	0/1:8,0:8:1.30:1,0,53	0/0:18,0:13:2.53:0,3,20	./.	1/1:18,0:18:2.60:10,3,0	0/1:12,1:13:9.43:9,0,122	0/0:6,0:5:3.01:0,3,43	0/0:15,0:13:7.09:0,7,38	1/1:8,0:8:3.22:13,3,0	0/1:6,0:6:15.95:28,0,16	0/0:13,0:13:3.01:0,3,44	0/1:12,1:11:1.24:1,0,74	0/0:6,1:7:9.03:0,9,114	1/1:7,0:7:0.89:2,1,0	1/1:12,0:12:0.81:7,1,0	0/0:13,0:13:18.04:0,18,232	0/1:16,0:16:5.06:46,0,5	0/1:16,1:18:20.55:21,0,213	0/0:11,0:10:9.85:0,10,68	1/1:16,1:17:3.01:30,3,0	0/0:22,0:21:12.01:0,12,154	0/1:7,0:7:13.54:14,0,30	1/1:12,1:13:8.93:72,9,0	./.	0/0:12,1:13:6.02:0,6,89	0/0:10,1:11:8.77:0,9,228	0/0:19,0:19:7.78:0,8,165	0/0:6,0:6:11.99:0,12,134
chr10	62075789	.	GTGTGTGTGTGTGTC	G	753.78	PASS	AB=1.000;AC=17;AF=0.315;AN=54;BaseQRankSum=6.212;DP=316;FS=1.262;HRun=0;HaplotypeScore=123.9329;InbreedingCoeff=-0.0317;MQ=45.58;MQ0=12;MQRankSum=-3.531;QD=3.71;ReadPosRankSum=0.091;VQSLOD=2.5078;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,19:27:2.99:40,3,0	0/0:5,0:5:15.05:0,15,699	0/0:7,0:3:2.99:0,3,23	0/0:11,0:2:3:0,3,26	1/1:3,11:14:3.48:121,3,0	0/1:13,0:13:62.56:177,0,63	0/0:5,0:4:8.93:0,9,82	0/1:26,0:25:55.81:56,0,290	0/0:5,0:5:8.96:0,9,99	0/0:5,0:5:15.01:0,15,137	0/0:4,0:4:6.01:0,6,68	0/1:10,0:8:79.92:80,0,81	0/0:7,0:7:9.03:0,9,126	0/0:4,0:4:5.99:0,6,51	0/1:11,0:11:18.88:138,0,19	0/0:10,0:10:9.54:0,10,134	0/1:22,0:21:15.47:15,0,767	0/1:20,0:20:51.38:51,0,361	0/0:8,0:7:14.04:0,14,136	1/1:11,0:11:1.95:56,2,0	0/1:18,0:17:37.36:37,0,144	0/1:5,0:5:17.24:17,0,113	1/1:12,0:12:3.20:45,3,0	./.	0/0:7,0:7:6.02:0,6,91	0/0:13,0:12:12.26:0,12,243	0/1:14,0:13:71.01:71,0,167	0/0:7,0:5:12.03:0,12,156
chr10	62075791	.	GTGTGTGTGTGTCTGTGTGTCTGTGTGTC	G	1142.66	PASS	AB=0.974;AC=11;AF=0.204;AN=54;BaseQRankSum=4.806;DP=312;FS=2.811;HRun=0;HaplotypeScore=180.2733;InbreedingCoeff=-0.1523;MQ=44.88;MQ0=12;MQRankSum=-1.271;QD=9.37;ReadPosRankSum=2.694;VQSLOD=2.7307;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:26:5.39:0,5,55	0/0:5,0:5:15.05:0,15,1417	0/0:8,0:4:5.97:0,6,45	./.	0/0:14,0:14:2.35:0,2,87	0/1:9,4:13:61.48:363,0,61	0/1:5,0:4:25.17:25,0,27	0/0:28,0:27:49.71:0,50,1267	0/0:3,0:3:3.01:0,3,241	0/0:5,0:5:8.74:0,9,64	0/0:3,0:3:3.01:0,3,49	0/1:10,0:8:99:110,0,132	0/0:6,0:6:9.03:0,9,143	0/0:4,0:4:3.01:0,3,43	0/1:11,0:11:38.46:199,0,38	0/1:10,0:10:41.54:42,0,70	0/0:22,0:21:36.46:0,36,2046	0/1:20,0:20:99:122,0,446	0/0:8,0:7:10.84:0,11,130	1/1:10,0:10:6.02:153,6,0	0/1:18,0:17:72.11:72,0,199	0/0:5,0:5:6.02:0,6,381	0/0:11,0:11:10.85:0,11,487	0/0:15,0:14:0.47:0,0,1	0/0:7,0:7:6.02:0,6,119	0/1:12,0:11:95.68:96,0,343	0/1:13,0:12:99:101,0,251	0/0:7,0:5:12.03:0,12,212
chr10	62075793	.	GTGTGTGTGTC	G	1196.56	PASS	AB=0.966;AC=25;AF=0.481;AN=52;BaseQRankSum=3.805;DP=316;FS=10.420;HRun=0;HaplotypeScore=109.2152;InbreedingCoeff=-0.1605;MQ=44.39;MQ0=11;MQRankSum=-2.794;QD=4.75;ReadPosRankSum=-1.944;VQSLOD=1.2923;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:25:3:40,3,0	0/0:5,0:5:14.84:0,15,413	0/0:7,0:3:5.47:0,5,30	./.	1/1:12,0:12:3.48:72,3,0	0/1:11,0:11:99:120,0,105	0/0:8,0:7:4.37:0,4,49	0/1:29,0:28:52.87:100,0,53	0/0:3,0:3:0.72:0,1,2	0/1:5,0:5:15.95:28,0,16	0/0:3,0:3:3.01:0,3,44	0/1:10,0:8:56.56:57,0,73	0/1:9,0:9:5.95:6,0,102	1/1:5,0:5:0.89:2,1,0	1/1:11,0:11:4.23:98,4,0	0/1:11,0:11:2.92:3,0,203	0/1:23,0:22:83.32:83,0,344	0/1:20,0:20:72.13:72,0,242	0/0:7,0:6:9.85:0,10,68	1/1:10,0:10:6.01:65,6,0	0/1:19,0:18:62.32:62,0,130	0/1:1,4:5:67.66:89,0,68	1/1:9,3:12:18.50:346,18,0	./.	0/0:5,0:5:6.02:0,6,89	0/1:12,0:11:2.24:2,0,200	0/1:13,0:12:47.69:48,0,157	0/1:10,0:8:50.92:51,0,110
chr10	62075795	.	GTGTGTGTCTGTGTGTCTGTGTGTC	G	2985.18	PASS	AB=0.896;AC=24;AF=0.545;AN=44;BaseQRankSum=-2.108;DP=310;FS=0.932;HRun=0;HaplotypeScore=158.2363;InbreedingCoeff=0.4543;MQ=46.16;MQ0=12;MQRankSum=-0.318;QD=17.66;ReadPosRankSum=-1.455;VQSLOD=2.0219;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:2.77:0,3,15	0/0:5,0:5:15.05:0,15,1171	0/0:7,0:4:9.01:0,9,215	0/0:13,0:3:3.01:0,3,56	0/0:12,0:12:2.35:0,2,40	1/1:9,1:10:12.04:541,12,0	1/1:8,0:7:5.85:78,6,0	0/1:30,0:29:55:55,0,614	0/0:3,0:3:3.01:0,3,190	./.	./.	1/1:6,4:8:3.01:191,3,0	1/1:9,0:9:3.01:54,3,0	./.	1/1:7,3:10:6.02:350,6,0	1/1:7,0:7:15.05:393,15,0	0/0:23,0:22:3.89:0,4,1597	0/1:14,5:19:80.18:201,0,80	./.	1/1:5,5:9:6.02:237,6,0	1/1:19,2:20:15.05:426,15,0	0/0:5,0:5:6.02:0,6,280	0/0:11,0:11:14.85:0,15,406	./.	./.	1/1:8,4:11:9.03:198,9,0	1/1:6,7:12:2.80:190,3,0	1/1:10,0:8:12.04:225,12,0
chr10	62075805	.	GTGTGTC	G	1943.56	PASS	AB=0.992;AC=34;AF=0.708;AN=48;BaseQRankSum=1.250;DP=287;FS=2.154;HRun=0;HaplotypeScore=90.0027;InbreedingCoeff=0.1470;MQ=46.22;MQ0=12;MQRankSum=-3.032;QD=8.13;ReadPosRankSum=1.976;VQSLOD=1.6372;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:25:3.48:46,3,0	0/0:5,0:5:14.16:0,14,144	0/0:8,0:5:11.21:0,11,198	0/0:10,0:3:9.02:0,9,130	0/1:12,0:12:17.15:17,0,33	1/1:10,0:10:8.98:103,9,0	1/1:10,0:9:4.03:33,4,0	1/1:3,24:27:62.35:890,62,0	0/1:3,0:3:9.58:26,0,10	./.	./.	1/1:10,0:8:3.01:42,3,0	1/1:9,0:9:2.94:18,3,0	./.	1/1:10,0:10:5.97:61,6,0	1/1:6,0:6:9.51:68,10,0	0/1:18,1:18:53.48:349,0,53	0/1:17,0:17:9.25:36,0,9	1/1:5,0:3:3:26,3,0	1/1:10,0:9:5.70:31,6,0	1/1:19,0:19:17.60:120,18,0	0/1:5,0:5:18.39:18,0,65	0/1:11,0:11:43.03:43,0,61	0/0:14,0:13:2.71:0,3,39	./.	1/1:10,0:9:7.21:50,7,0	1/1:12,0:11:2.93:42,3,0	1/1:9,0:7:11.80:75,12,0
chr10	62077453	.	AACACAC	A	1686.38	PASS	AB=0.823;AC=36;AF=0.783;AN=46;BaseQRankSum=3.092;DP=492;FS=1.012;HRun=0;HaplotypeScore=97.6235;InbreedingCoeff=0.3850;MQ=62.30;MQ0=18;MQRankSum=-2.834;QD=5.70;ReadPosRankSum=-0.584;VQSLOD=1.9563;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:34,4:37:9.50:181,10,0	0/0:10,0:11:5.15:0,5,133	./.	./.	0/1:10,3:12:12.95:122,0,13	1/1:13,6:18:9.03:161,9,0	1/1:14,2:16:3.01:60,3,0	./.	1/1:12,0:14:0.88:2,1,0	0/1:12,3:15:46.60:148,0,47	1/1:7,4:11:6.02:119,6,0	1/1:10,0:11:3.01:42,3,0	1/1:13,0:13:3.01:59,3,0	1/1:9,3:13:8.54:161,9,0	1/1:11,7:19:12.04:219,12,0	1/1:8,2:10:6.02:120,6,0	0/0:22,0:27:21.07:0,21,588	1/1:10,0:12:0.85:2,1,0	./.	1/1:13,1:14:3.90:60,4,0	1/1:33,0:33:11.99:135,12,0	0/0:22,0:20:12.04:0,12,277	./.	0/0:33,0:31:33.11:0,33,909	1/1:4,1:5:3.01:60,3,0	1/1:16,0:16:6.01:79,6,0	1/1:18,0:18:5.87:39,6,0	1/1:4,1:4:3.01:60,3,0
chr10	62080256	.	T	TAAAAC	16472.69	PASS	AB=1.000;AC=45;AF=0.804;AN=56;BaseQRankSum=0.323;DP=712;FS=3.584;HRun=0;HaplotypeScore=224.4896;InbreedingCoeff=0.1824;MQ=59.98;MQ0=5;MQRankSum=-4.566;QD=24.81;ReadPosRankSum=-3.720;VQSLOD=3.5515;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:17.63:0,18,325	0/1:23,0:23:99:300,0,332	0/1:29,0:22:21.07:21,0,80	0/1:46,0:24:10.04:10,0,88	0/1:14,0:14:53.55:54,0,273	1/1:24,2:26:45.12:921,45,0	1/1:14,0:14:5.93:239,6,0	0/0:29,0:29:13.48:0,13,311	0/1:23,0:23:76.92:77,0,389	1/1:28,14:42:72.25:1631,72,0	1/1:15,8:23:39.57:781,40,0	1/1:6,7:14:33.07:727,33,0	1/1:8,10:18:33.11:756,33,0	1/1:12,13:25:51.11:1209,51,0	1/1:11,11:22:27.09:608,27,0	1/1:18,12:30:24.55:558,25,0	0/1:26,0:26:96.99:97,0,362	1/1:23,4:27:38.46:962,38,0	1/1:21,4:23:16.24:359,16,0	1/1:18,13:31:48.12:1111,48,0	1/1:9,6:15:6.02:121,6,0	1/1:35,0:35:10.94:490,11,0	1/1:41,0:40:45.45:704,45,0	0/1:14,0:14:18.82:141,0,19	1/1:14,13:28:54.17:1175,54,0	1/1:20,11:31:51.65:1353,52,0	1/1:24,12:36:75.20:1849,75,0	1/1:2,3:5:12.01:218,12,0
chr10	62080289	.	AACAGG	A	9047.78	PASS	AB=0.973;AC=25;AF=0.446;AN=56;BaseQRankSum=-7.845;DP=876;FS=20.574;HRun=0;HaplotypeScore=228.2361;InbreedingCoeff=-0.6834;MQ=44.18;MQ0=20;MQRankSum=12.619;QD=14.45;ReadPosRankSum=-13.466;VQSLOD=0.4300;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:20,0:20:99:346,0,439	0/1:21,0:21:99:195,0,785	0/0:91,0:28:46.02:0,46,814	0/0:116,0:44:94.49:0,94,1017	0/0:19,0:19:16.30:0,16,442	0/1:28,2:30:99:656,0,224	1/1:10,0:10:5.11:206,5,0	0/1:15,20:35:99:759,0,548	0/0:24,0:24:45.15:0,45,1025	0/1:38,0:38:99:658,0,578	0/1:19,0:19:99:180,0,342	0/1:20,0:20:99:209,0,422	0/1:20,0:20:99:133,0,511	0/1:27,0:27:99:310,0,781	0/1:27,0:27:99:439,0,420	0/1:29,0:29:99:484,0,324	0/1:25,0:25:99:481,0,522	0/1:21,4:25:99:481,0,338	0/1:30,0:28:99:361,0,515	0/1:31,0:31:99:411,0,665	0/1:15,0:15:99:189,0,149	0/1:29,0:29:99:349,0,655	0/1:43,0:42:99:273,0,611	0/1:20,0:20:30.79:558,0,31	0/1:35,0:34:99:374,0,599	0/1:30,0:30:99:344,0,585	0/1:35,2:37:99:492,0,856	0/1:10,0:10:99:160,0,136
chr10	62080294	.	G	GACAAAACAAAACAAA	25180.79	PASS	AB=1.000;AC=53;AF=0.946;AN=56;BaseQRankSum=-3.408;DP=857;FS=3.192;HRun=0;HaplotypeScore=321.7205;InbreedingCoeff=0.3894;MQ=44.29;MQ0=20;MQRankSum=0.655;QD=33.71;ReadPosRankSum=3.700;VQSLOD=3.5314;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:22:25.39:792,25,0	1/1:20,0:20:1.60:52,2,0	0/1:91,0:28:24.02:24,0,264	0/0:110,0:41:3.47:0,3,430	1/1:7,14:23:12.04:377,12,0	1/1:28,0:28:58.43:1455,58,0	1/1:9,0:9:12.04:281,12,0	1/1:33,0:33:42.91:698,43,0	1/1:8,0:26:21.07:672,21,0	1/1:35,0:35:76.84:1731,77,0	1/1:18,0:18:32.33:697,32,0	1/1:20,0:20:45.73:828,46,0	1/1:20,0:20:45.31:784,45,0	1/1:28,0:28:69.56:1189,70,0	1/1:28,0:28:62.40:1245,62,0	1/1:29,0:29:54.83:1249,55,0	1/1:26,0:26:27.66:570,28,0	1/1:23,0:23:36.65:811,37,0	1/1:26,0:24:48.78:1207,49,0	1/1:33,0:33:69.37:1311,69,0	1/1:13,0:13:15.05:477,15,0	1/1:26,0:27:39.13:985,39,0	1/1:41,0:40:56.68:1238,57,0	1/1:20,0:20:45.15:1090,45,0	1/1:30,0:29:67.60:1527,68,0	1/1:27,0:27:53.63:1309,54,0	1/1:38,0:38:93.89:1896,94,0	1/1:13,0:13:30.46:683,30,0
chr10	62081826	.	TTGGTGG	T	859.76	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.357;DP=621;FS=1.937;HRun=0;HaplotypeScore=130.7695;InbreedingCoeff=0.9876;MQ=67.60;MQ0=0;MQRankSum=-7.182;QD=34.39;ReadPosRankSum=0.594;VQSLOD=3.7071;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:87.75:0,88,2756	0/0:9,0:9:21.07:0,21,667	0/0:21,0:16:32.95:0,33,668	0/0:22,0:20:26.35:0,26,733	0/0:18,0:18:42.11:0,42,1286	0/0:23,0:23:54.19:0,54,1781	0/0:24,0:24:51.16:0,51,1612	0/0:15,0:15:24.07:0,24,663	1/1:3,22:25:54.02:955,54,0	0/0:17,0:17:42.14:0,42,1318	0/0:19,0:19:39.13:0,39,1278	0/0:14,0:14:30.10:0,30,999	0/0:14,0:14:39.13:0,39,1291	0/0:25,0:25:66.20:0,66,2049	0/0:31,0:31:78.20:0,78,2473	0/0:30,0:30:69.21:0,69,2092	0/0:29,0:29:75.15:0,75,2252	0/0:17,0:17:30.06:0,30,919	0/0:19,0:19:27.09:0,27,884	0/0:25,0:25:42.14:0,42,1246	0/0:42,0:42:84.29:0,84,2641	0/0:26,0:26:57.20:0,57,1874	0/0:4,0:14:29.13:0,29,176	0/0:26,0:26:63.22:0,63,2013	0/0:23,0:23:39.12:0,39,1206	0/0:23,0:23:42.13:0,42,1318	0/0:24,0:24:66.18:0,66,1998	0/0:10,0:10:24.08:0,24,730
chr10	62082001	.	G	GT	4005.54	PASS	AB=0.665;AC=38;AF=0.679;AN=56;BaseQRankSum=-5.139;DP=522;FS=1.769;HRun=15;HaplotypeScore=70.8795;InbreedingCoeff=-0.0733;MQ=80.58;MQ0=6;MQRankSum=2.043;QD=9.15;ReadPosRankSum=-0.162;VQSLOD=2.9623;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:9,14:25:13.49:192,0,13	1/1:3,2:7:11.67:79,12,0	0/0:38,0:20:18.62:0,19,100	0/0:27,0:21:0.13:0,0,28	1/1:6,12:19:17.71:235,18,0	0/1:6,10:17:21.24:189,0,21	0/1:8,4:12:4.99:42,0,5	1/1:18,12:31:12.88:379,13,0	0/0:15,0:15:11.69:0,12,143	1/1:8,13:21:23.93:192,24,0	1/1:3,12:17:32.48:238,32,0	1/1:7,6:14:1.05:99,1,0	0/1:3,3:6:12.02:19,0,12	0/1:6,9:15:9.06:146,0,9	0/1:11,11:24:18.27:171,0,18	1/1:6,14:20:2.97:133,3,0	1/1:4,12:17:23.82:190,24,0	0/1:12,15:28:3.94:214,0,4	0/1:12,9:21:16.40:164,0,16	0/1:8,10:19:7.03:172,0,7	1/1:8,6:14:11.99:101,12,0	0/1:13,5:18:69.35:69,0,77	0/1:3,9:14:9.37:128,0,9	1/1:4,4:8:3:25,3,0	1/1:3,8:11:4.34:91,4,0	1/1:9,16:26:32.75:369,33,0	1/1:10,14:27:14.47:309,14,0	0/1:4,3:7:21.04:61,0,21
chr10	62082548	.	GTT	G	7653.18	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-6.970;DP=463;FS=22.296;HRun=14;HaplotypeScore=67.3376;InbreedingCoeff=0.7901;MQ=63.34;MQ0=6;MQRankSum=1.205;QD=18.01;ReadPosRankSum=3.734;VQSLOD=2.1956;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,33:43:62.47:770,62,0	1/1:1,2:4:8.71:67,9,0	0/0:15,0:10:15.04:0,15,174	0/0:13,0:10:21.90:0,22,216	1/1:2,11:14:29.76:262,30,0	1/1:6,14:21:38.78:402,39,0	1/1:4,7:11:26.49:218,26,0	1/1:4,8:12:2.11:197,2,0	0/0:2,0:10:25.34:0,25,120	1/1:8,12:23:41.31:394,41,0	1/1:5,6:13:14.59:170,15,0	1/1:2,6:8:12:111,12,0	1/1:7,9:16:20.69:241,21,0	1/1:3,7:11:20.73:178,21,0	1/1:2,9:12:29.72:262,30,0	1/1:3,10:14:35.74:317,36,0	1/1:5,16:24:56.50:495,56,0	1/1:4,19:22:50.92:460,51,0	1/1:3,8:11:20.81:232,21,0	1/1:1,14:18:35.23:346,35,0	1/1:4,23:27:27.44:421,27,0	1/1:2,6:9:5.72:149,6,0	1/1:1,16:19:41.48:357,41,0	1/1:2,15:18:45.03:417,45,0	1/1:4,13:16:29.77:324,30,0	1/1:5,14:19:44.99:412,45,0	1/1:5,18:23:39.55:332,40,0	1/1:4,5:9:0.92:120,1,0
chr10	62082636	.	ATT	A	4690.18	PASS	AB=0.602;AC=42;AF=0.750;AN=56;BaseQRankSum=-6.598;DP=409;FS=4.001;HRun=15;HaplotypeScore=62.5947;InbreedingCoeff=0.6143;MQ=66.69;MQ0=4;MQRankSum=0.903;QD=14.57;ReadPosRankSum=0.717;VQSLOD=3.9275;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,16:26:38.32:417,38,0	0/1:5,1:7:12.50:13,0,44	0/0:21,0:10:8.43:0,8,50	0/0:12,0:6:4.95:0,5,47	1/1:9,3:14:20.43:200,20,0	1/1:2,15:17:38.99:344,39,0	1/1:4,10:14:20.91:185,21,0	0/0:8,0:16:23.97:0,24,140	1/1:4,9:17:32.08:246,32,0	1/1:2,12:16:32.16:300,32,0	1/1:3,9:14:20.59:163,21,0	0/1:2,12:14:0.92:255,0,1	1/1:3,13:17:35.77:317,36,0	1/1:0,7:8:14.74:117,15,0	1/1:3,6:9:14.94:132,15,0	1/1:3,16:18:31.85:334,32,0	0/0:9,1:29:24.96:0,25,167	1/1:4,2:7:8.70:65,9,0	1/1:4,7:11:23.62:186,24,0	1/1:4,7:11:23.95:211,24,0	1/1:5,6:11:20.91:181,21,0	0/0:1,0:7:12.48:0,12,43	0/1:5,2:16:15.56:16,0,97	0/1:0,1:9:5.96:6,0,40	1/1:2,5:8:17.74:144,18,0	1/1:6,8:15:14.69:176,15,0	1/1:15,15:31:62.48:539,62,0	1/1:4,5:9:17.71:145,18,0
chr10	62082855	.	C	CT	3598.49	PASS	AB=1.000;AC=47;AF=0.839;AN=56;BaseQRankSum=-4.779;DP=445;FS=6.054;HRun=7;HaplotypeScore=67.3150;InbreedingCoeff=0.7831;MQ=75.42;MQ0=6;MQRankSum=0.794;QD=10.52;ReadPosRankSum=1.106;VQSLOD=1.5691;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:22,2:23:39.56:218,40,0	0/0:5,0:5:14.95:0,15,118	0/0:36,0:13:3.01:0,3,50	0/1:29,0:15:31.62:32,0,51	1/1:11,1:12:20.32:120,20,0	1/1:18,1:19:38.80:219,39,0	1/1:9,0:9:16.70:84,17,0	0/0:27,0:27:59.81:0,60,473	1/1:13,0:13:29.72:211,30,0	1/1:20,0:20:35.58:182,36,0	1/1:12,0:12:23.81:161,24,0	1/1:11,0:11:22.92:163,23,0	1/1:14,0:14:27.81:142,28,0	1/1:9,0:9:17.09:99,17,0	1/1:8,1:9:15.87:89,16,0	1/1:11,1:12:22.50:121,22,0	0/0:35,0:35:77.64:0,78,593	1/1:14,0:14:25.12:159,25,0	1/1:25,0:25:25.63:295,26,0	1/1:16,0:16:27.34:151,27,0	1/1:5,0:5:12.88:69,13,0	1/1:8,0:8:11.47:71,11,0	1/1:12,0:12:17.69:123,18,0	1/1:7,0:7:17.49:125,17,0	1/1:10,1:11:31.93:255,32,0	1/1:14,1:15:20.86:135,21,0	1/1:19,0:19:35.54:213,36,0	1/1:16,0:16:30.90:161,31,0
chr10	62082862	.	TAA	T	961.59	PASS	AB=0.878;AC=16;AF=0.286;AN=56;BaseQRankSum=-1.414;DP=440;FS=15.504;HRun=15;HaplotypeScore=78.9119;InbreedingCoeff=0.5559;MQ=70.05;MQ0=9;MQRankSum=2.652;QD=6.50;ReadPosRankSum=1.508;VQSLOD=-0.7352;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:24:24.25:0,24,416	1/1:3,2:5:5.95:53,6,0	0/0:41,0:10:20.39:0,20,187	0/0:32,0:14:8.36:0,8,100	0/0:9,0:9:20.92:0,21,208	0/0:19,0:21:8.57:0,9,276	0/0:8,0:8:15.04:0,15,163	1/1:10,17:27:41.66:406,42,0	1/1:5,0:12:12.35:45,12,0	0/0:16,0:18:26.11:0,26,338	0/0:8,0:10:0.76:0,1,114	0/1:12,0:12:3.60:4,0,121	0/0:12,0:13:14.77:0,15,187	0/0:8,0:9:7.14:0,7,108	0/0:8,0:8:19.86:0,20,197	0/0:9,0:10:18.80:0,19,253	1/1:7,25:34:62.37:526,62,0	0/0:16,0:17:19.74:0,20,211	0/1:20,1:22:16.79:17,0,223	0/0:13,0:14:21.36:0,21,267	0/0:6,0:6:12.91:0,13,125	0/1:2,0:4:8.76:9,0,9	1/1:5,0:9:7.93:51,8,0	1/1:5,0:9:4.76:17,5,0	0/1:12,1:13:9.77:10,0,121	0/0:11,0:12:27.02:0,27,267	0/0:21,0:21:34.25:0,34,317	0/0:16,0:17:36.06:0,36,375
chr10	62083335	.	A	AT	286.72	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-4.420;DP=612;FS=0.000;HRun=5;HaplotypeScore=60.4911;InbreedingCoeff=0.9946;MQ=66.05;MQ0=1;MQRankSum=1.333;QD=23.89;ReadPosRankSum=0.420;VQSLOD=2.3519;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,102,1088	0/0:11,0:11:21.05:0,21,226	0/0:19,0:14:39.10:0,39,419	0/0:22,0:19:46.34:0,46,473	0/0:25,0:25:63.14:0,63,668	0/0:21,0:21:60.11:0,60,632	0/0:31,0:31:84.21:0,84,903	0/0:36,0:36:99:0,105,1128	1/1:2,10:12:30.09:381,30,0	0/0:29,0:29:77.98:0,78,814	0/0:12,0:12:33.08:0,33,354	0/0:19,0:19:54.14:0,54,580	0/0:15,0:15:36.09:0,36,387	0/0:14,0:13:36.07:0,36,378	0/0:25,0:25:69.17:0,69,738	0/0:20,0:20:54.13:0,54,580	0/0:28,0:28:78.15:0,78,818	0/0:12,0:12:36.09:0,36,387	0/0:25,0:25:63.16:0,63,676	0/0:19,0:19:57.10:0,57,600	0/0:21,0:21:63.16:0,63,677	0/0:22,0:22:45.11:0,45,483	0/0:20,0:20:48.01:0,48,499	0/0:28,0:28:84.19:0,84,893	0/0:12,0:12:36.09:0,36,386	0/0:32,0:32:84.20:0,84,896	0/0:22,0:22:60.13:0,60,635	0/0:22,0:22:54.13:0,54,580
chr10	62083805	.	G	GTA	1497.17	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-3.426;DP=519;FS=3.982;HRun=0;HaplotypeScore=106.0440;InbreedingCoeff=0.8494;MQ=61.37;MQ0=2;MQRankSum=-1.968;QD=26.27;ReadPosRankSum=-2.276;VQSLOD=4.2669;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:33:72.17:0,72,925	1/1:1,4:5:6.02:103,6,0	0/0:6,0:4:9.01:0,9,94	0/0:8,0:6:2.67:0,3,11	0/0:33,0:33:87.21:0,87,1071	0/0:20,0:20:51.13:0,51,637	0/0:17,0:17:45.09:0,45,531	1/1:5,29:35:90.01:1117,90,0	0/0:16,0:16:24.05:0,24,285	0/0:29,0:29:74.94:0,75,938	0/0:26,0:26:78.17:0,78,960	0/0:16,0:16:36.07:0,36,428	0/0:10,0:10:30.03:0,30,328	0/0:18,0:18:48.13:0,48,600	0/0:11,0:11:27.06:0,27,325	0/0:19,0:19:54.15:0,54,680	1/1:2,15:17:23.89:411,24,0	0/0:14,0:14:39.08:0,39,492	0/0:28,0:26:66.17:0,66,811	0/0:25,0:25:57.14:0,57,702	0/0:15,0:15:36.09:0,36,442	0/0:7,0:7:6.01:0,6,64	0/0:15,0:15:18:0,18,188	0/0:21,0:21:27.03:0,27,304	0/0:16,0:16:45.13:0,45,576	0/0:21,0:21:60.16:0,60,748	0/0:22,0:22:57.10:0,57,670	0/0:15,0:15:42.14:0,42,550
chr10	62083876	.	T	TAC	619.14	PASS	AB=1.000;AC=3;AF=0.056;AN=54;BaseQRankSum=-2.147;DP=577;FS=3.304;HRun=0;HaplotypeScore=121.2911;InbreedingCoeff=0.6055;MQ=55.95;MQ0=5;MQRankSum=-0.265;QD=17.20;ReadPosRankSum=3.076;VQSLOD=3.9872;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:60.11:0,60,731	0/0:6,0:6:9.03:0,9,117	0/0:6,0:2:2.84:0,3,14	0/0:10,0:1:3:0,3,28	0/0:31,0:31:52.91:0,53,620	0/0:17,0:17:39.07:0,39,460	0/0:15,0:15:29.83:0,30,389	0/0:52,0:52:99:0,129,1517	1/1:8,17:25:27.19:712,27,0	0/0:34,0:34:87.06:0,87,1059	0/0:29,0:29:47.96:0,48,593	0/0:17,0:17:36.10:0,36,453	0/0:19,0:19:51.13:0,51,630	0/0:19,0:19:48.07:0,48,547	0/0:20,0:20:42.10:0,42,514	0/0:14,1:15:18.06:0,18,234	0/0:23,0:24:32.78:0,33,404	0/0:14,0:13:11.07:0,11,293	0/0:13,0:12:30.06:0,30,373	0/0:25,0:25:36.08:0,36,425	0/0:15,0:15:30.05:0,30,344	./.	0/1:11,0:11:0:0,0,0	0/0:11,0:11:2.77:0,3,39	0/0:32,0:32:48.11:0,48,568	0/0:29,0:29:75.19:0,75,933	0/0:24,0:24:48.08:0,48,573	0/0:31,0:30:72.09:0,72,810
chr10	62083908	.	T	TATAC	8832.08	PASS	AB=1.000;AC=37;AF=0.740;AN=50;BaseQRankSum=-7.346;DP=588;FS=3.878;HRun=0;HaplotypeScore=122.7946;InbreedingCoeff=0.5862;MQ=54.36;MQ0=0;MQRankSum=1.861;QD=18.48;ReadPosRankSum=3.690;VQSLOD=4.2479;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:56.94:0,57,813	0/0:6,0:6:2.80:0,3,13	./.	./.	0/0:33,0:33:26.97:0,27,355	1/1:4,11:16:12.04:290,12,0	1/1:7,11:18:9.03:217,9,0	0/1:46,0:44:77.94:138,0,78	0/1:29,0:29:48.38:111,0,48	1/1:13,25:41:52.36:949,52,0	1/1:9,14:23:15.05:362,15,0	1/1:6,10:16:21.07:507,21,0	1/1:8,10:20:12.04:290,12,0	1/1:2,13:15:24.08:580,24,0	1/1:6,15:22:27.09:652,27,0	1/1:4,16:20:21.07:491,21,0	0/1:25,0:25:41.05:41,0,82	1/1:7,10:20:21.03:455,21,0	1/1:9,8:16:23.95:401,24,0	1/1:9,22:33:21.07:497,21,0	1/1:1,15:17:21.07:507,21,0	./.	0/0:12,0:12:9:0,9,113	0/0:8,0:8:9.01:0,9,116	1/1:6,17:23:15.05:362,15,0	1/1:5,20:25:28.10:951,28,0	1/1:6,20:26:30.10:725,30,0	1/1:15,11:26:14.94:306,15,0
chr10	62084052	.	TGTCCCTTCCACCTCCCACA	T	3027.26	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=6.906;DP=591;FS=7.299;HRun=0;HaplotypeScore=286.1038;InbreedingCoeff=0.9769;MQ=78.66;MQ0=0;MQRankSum=-6.296;QD=97.65;ReadPosRankSum=1.158;VQSLOD=2.4101;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:57:99:0,166,13583	0/0:10,0:10:30.10:0,30,2605	0/0:11,0:11:32.97:0,33,2112	0/0:24,0:24:68.82:0,69,5273	0/0:29,0:29:81.28:0,81,6861	0/0:20,0:20:60.21:0,60,4845	0/0:24,0:24:72.25:0,72,5868	0/0:24,0:24:72.25:0,72,4887	0/0:21,0:21:63.22:0,63,4584	0/0:24,0:24:72.25:0,72,5844	0/0:15,0:15:45.15:0,45,3308	0/0:18,0:18:51.18:0,51,4303	0/0:28,0:28:84.29:0,84,7174	0/0:19,0:19:57.20:0,57,4936	0/0:23,0:23:69.24:0,69,5892	0/0:25,0:25:75.26:0,75,6388	0/0:24,0:24:72.25:0,72,6352	0/0:15,0:15:45.15:0,45,3603	0/0:14,0:14:42.13:0,42,3030	0/0:17,0:17:48.16:0,48,4198	0/0:43,0:43:99:0,129,10524	1/1:0,13:13:30.10:1616,30,0	1/1:2,9:11:24.08:1250,24,0	1/1:5,2:6:9.03:298,9,0	0/0:24,0:24:72.25:0,72,6267	0/0:14,0:14:42.14:0,42,3688	0/0:29,0:29:84.29:0,84,7026	0/0:8,0:8:24.08:0,24,1768
chr10	62084147	.	CA	C	5363.53	PASS	AB=1.000;AC=52;AF=0.929;AN=56;BaseQRankSum=7.389;DP=589;FS=1.340;HRun=3;HaplotypeScore=137.0699;InbreedingCoeff=-0.0893;MQ=87.32;MQ0=0;MQRankSum=-1.817;QD=9.11;ReadPosRankSum=9.496;VQSLOD=1.2830;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:46,1:46:5.69:378,6,0	1/1:8,0:8:20.95:87,21,0	0/1:31,0:31:24.40:24,0,113	0/1:18,0:18:27.19:27,0,68	1/1:31,1:32:35.46:310,35,0	1/1:19,0:19:13.53:183,14,0	1/1:17,0:17:38:174,38,0	0/1:33,0:33:33.65:152,0,34	1/1:22,0:22:49.50:236,50,0	1/1:25,0:25:24.80:159,25,0	1/1:23,1:24:61.43:254,61,0	1/1:19,1:20:55.67:288,56,0	1/1:23,0:23:2.43:200,2,0	1/1:20,0:19:34.33:240,34,0	1/1:17,0:17:22.91:186,23,0	1/1:23,0:22:41.28:252,41,0	1/1:17,0:17:24.62:180,25,0	1/1:10,0:10:24.26:106,24,0	1/1:22,0:22:53.39:244,53,0	0/1:14,0:14:12.91:87,0,13	1/1:22,1:23:56.60:284,57,0	1/1:13,0:13:31.41:134,31,0	1/1:16,0:16:33.71:142,34,0	1/1:14,0:14:33.24:165,33,0	1/1:20,0:20:51.51:209,52,0	1/1:19,0:19:48.55:207,49,0	1/1:30,0:30:52.61:346,53,0	1/1:12,0:11:9.07:109,9,0
chr10	62084376	.	GC	G	18938.10	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=2.808;DP=704;FS=2.519;HRun=2;HaplotypeScore=98.0870;InbreedingCoeff=0.9878;MQ=86.87;MQ0=0;MQRankSum=-6.817;QD=34.50;ReadPosRankSum=6.940;VQSLOD=4.4150;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,32:36:93.21:1163,93,0	0/0:12,0:12:36.07:0,36,513	0/0:35,0:35:98.71:0,99,1344	0/0:31,0:29:68:0,68,840	1/1:1,37:38:99:1381,114,0	1/1:0,18:18:54.07:660,54,0	1/1:1,25:26:57.10:701,57,0	0/0:36,0:36:99:0,99,1386	0/0:16,0:15:45.15:0,45,673	1/1:1,33:34:99:1282,99,0	1/1:0,14:14:42.14:545,42,0	1/1:0,21:21:60.20:777,60,0	1/1:0,25:25:66.17:835,66,0	1/1:0,20:20:57.18:734,57,0	1/1:3,31:34:99:1259,99,0	1/1:1,23:24:69.22:893,69,0	0/0:25,0:24:63.07:0,63,860	1/1:0,11:11:24.08:311,24,0	1/1:3,20:23:69.18:876,69,0	1/1:0,24:24:66.57:813,67,0	1/1:2,32:34:84.10:1064,84,0	1/1:0,18:18:48.05:582,48,0	1/1:0,21:21:51.08:623,51,0	1/1:0,20:20:51.10:640,51,0	1/1:1,23:24:63.14:786,63,0	1/1:1,38:39:99:1459,114,0	1/1:2,39:41:99:1438,111,0	1/1:0,4:4:9.03:117,9,0
chr10	62085230	.	C	CA	485.05	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-3.811;DP=545;FS=0.000;HRun=7;HaplotypeScore=53.4945;InbreedingCoeff=0.9594;MQ=71.39;MQ0=0;MQRankSum=0.101;QD=26.95;ReadPosRankSum=-0.506;VQSLOD=3.8583;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:93.12:0,93,891	0/0:10,0:10:21.03:0,21,203	0/0:14,0:12:15.02:0,15,144	0/0:7,0:7:15.02:0,15,145	0/0:24,0:24:63.09:0,63,608	0/0:23,0:23:57.06:0,57,540	0/0:11,0:11:33.04:0,33,312	0/0:31,0:31:81.25:0,81,797	1/1:1,17:18:48.15:580,48,0	0/0:24,0:24:57.08:0,57,550	0/0:17,0:17:45.02:0,45,425	0/0:14,0:14:39.06:0,39,377	0/0:17,0:17:42.05:0,42,406	0/0:20,0:20:51.08:0,51,493	0/0:27,0:27:63.10:0,63,608	0/0:24,0:24:60.09:0,60,579	0/0:16,0:17:50.10:0,50,464	0/0:13,0:13:30.05:0,30,290	0/0:17,0:17:45.06:0,45,431	0/0:17,0:17:51.08:0,51,493	0/0:20,0:20:57.09:0,57,550	0/0:16,0:16:30.04:0,30,290	0/0:22,0:22:57.09:0,57,550	0/0:7,0:7:21.02:0,21,197	0/0:25,0:25:72.11:0,72,695	0/0:35,0:35:90.12:0,90,864	0/0:29,0:29:78.12:0,78,753	0/0:12,0:12:27.04:0,27,261
chr10	62085469	.	C	CT	846.85	PASS	AB=0.772;AC=6;AF=0.107;AN=56;BaseQRankSum=-6.190;DP=586;FS=5.788;HRun=11;HaplotypeScore=64.1817;InbreedingCoeff=0.6250;MQ=65.71;MQ0=3;MQRankSum=0.641;QD=9.85;ReadPosRankSum=-2.873;VQSLOD=2.0851;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:82.72:0,83,632	1/1:0,10:10:23.84:217,24,0	0/0:22,0:16:29.02:0,29,198	0/0:16,0:11:17.89:0,18,134	0/0:21,0:22:37.78:0,38,278	0/0:19,0:19:40.87:0,41,308	0/1:17,2:19:13.08:13,0,277	1/1:11,20:33:26.94:460,27,0	0/0:17,0:18:49.77:0,50,367	0/0:19,0:19:41.80:0,42,324	0/0:24,2:26:31.65:0,32,419	0/0:23,1:24:29.31:0,29,408	0/0:15,0:15:41.83:0,42,325	0/0:21,0:23:61.77:0,62,468	0/0:23,0:24:56.72:0,57,441	0/0:19,0:20:49.83:0,50,375	0/1:8,13:23:15.08:292,0,15	0/0:26,0:28:64.73:0,65,489	0/0:19,0:21:31.41:0,31,339	0/0:14,0:15:40.88:0,41,307	0/0:14,0:15:34.89:0,35,261	0/0:13,0:13:35.85:0,36,277	0/0:11,3:14:10.53:0,11,169	0/0:28,0:28:71.68:0,72,556	0/0:21,1:23:31.35:0,31,417	0/0:22,0:23:46.80:0,47,352	0/0:19,0:19:34.82:0,35,313	0/0:22,0:22:50.72:0,51,391
chr10	62086002	.	C	CATCT	2494.45	PASS	AB=1.000;AC=17;AF=0.315;AN=54;BaseQRankSum=0.001;DP=689;FS=2.070;HRun=0;HaplotypeScore=115.8077;InbreedingCoeff=0.8832;MQ=65.80;MQ0=3;MQRankSum=-3.042;QD=12.53;ReadPosRankSum=-2.638;VQSLOD=3.0552;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:57.17:0,57,833	1/1:6,3:9:3.01:71,3,0	./.	0/1:16,0:9:0:0,0,0	0/0:27,0:27:48.16:0,48,739	0/0:25,0:24:38.59:0,39,558	0/0:20,0:20:24.07:0,24,348	1/1:35,0:33:27.09:386,27,0	1/1:18,2:31:24.08:417,24,0	0/0:27,0:27:39.13:0,39,598	0/0:28,0:28:45.15:0,45,687	0/0:18,0:18:27.09:0,27,414	0/0:23,0:23:48.16:0,48,732	0/0:24,0:24:42.14:0,42,639	1/1:12,10:22:24.08:547,24,0	0/0:25,0:25:39.12:0,39,578	1/1:9,2:19:9.03:152,9,0	0/0:18,0:18:18.06:0,18,279	0/0:9,0:9:9.03:0,9,133	0/0:26,0:26:30.09:0,30,436	0/0:42,0:42:63.19:0,63,945	1/1:7,15:23:21.07:494,21,0	1/1:14,12:27:21.07:477,21,0	1/1:6,7:15:6.02:141,6,0	0/0:33,0:33:48.15:0,48,707	0/0:23,0:23:36.12:0,36,542	0/0:35,0:36:63.21:0,63,953	0/0:23,0:23:6.02:0,6,93
chr10	62087432	.	ACTC	A	1765.05	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.382;DP=698;FS=0.000;HRun=0;HaplotypeScore=136.6027;InbreedingCoeff=0.9990;MQ=86.88;MQ0=0;MQRankSum=-1.129;QD=31.52;ReadPosRankSum=3.165;VQSLOD=3.8033;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,120,2555	0/0:8,0:8:24.08:0,24,531	0/0:30,0:30:90.16:0,90,1822	0/0:17,0:17:37.41:0,37,881	0/0:23,0:23:63.22:0,63,1404	0/0:17,0:17:48.16:0,48,1060	0/0:27,0:27:75.19:0,75,1544	0/0:29,0:29:78.27:0,78,1712	0/0:25,0:25:72.24:0,72,1539	0/0:24,0:24:72.25:0,72,1561	0/0:15,0:15:39.13:0,39,870	0/0:23,0:23:69.24:0,69,1512	0/0:18,0:18:51.15:0,51,1077	0/0:26,0:26:72.25:0,72,1606	0/0:25,0:25:72.25:0,72,1606	0/0:14,0:14:39.13:0,39,871	0/0:44,0:44:99:0,126,2723	0/0:25,0:25:72.25:0,72,1552	0/0:25,0:25:69.21:0,69,1399	0/0:21,0:21:56.91:0,57,1224	0/0:65,0:65:99:0,187,4075	1/1:1,22:23:51.17:832,51,0	1/1:2,15:17:33.02:538,33,0	1/1:1,15:16:33.11:538,33,0	0/0:21,0:21:57.16:0,57,1209	0/0:35,0:35:99:0,105,2342	0/0:30,0:30:90.29:0,90,1925	0/0:15,0:15:42.14:0,42,937
chr10	62089168	.	A	ATT	2405.65	PASS	AB=0.833;AC=45;AF=0.938;AN=48;BaseQRankSum=1.337;DP=96;FS=51.540;HRun=1;HaplotypeScore=68.4969;InbreedingCoeff=0.2032;MQ=90.13;MQ0=0;MQRankSum=-3.651;QD=27.03;ReadPosRankSum=2.917;VQSLOD=0.0934;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,7:6:18.04:182,18,0	1/1:0,1:1:3.01:30,3,0	0/1:1,1:5:28.96:29,0,111	0/0:3,0:6:8.03:0,8,88	1/1:0,7:7:21.01:186,21,0	1/1:0,5:5:15.03:153,15,0	1/1:0,1:1:3:29,3,0	1/1:0,1:2:6.02:96,6,0	./.	1/1:0,2:2:6.02:73,6,0	1/1:0,2:2:6:53,6,0	1/1:1,5:6:18.03:177,18,0	1/1:0,4:4:12.02:115,12,0	1/1:0,10:10:30.04:280,30,0	1/1:0,2:2:6.01:58,6,0	1/1:0,3:3:9.02:92,9,0	1/1:1,3:4:6.97:87,7,0	1/1:0,3:3:9.03:105,9,0	./.	1/1:0,4:4:12.01:111,12,0	1/1:0,2:2:6:53,6,0	1/1:0,1:1:3.01:30,3,0	1/1:0,2:2:6.01:58,6,0	./.	1/1:0,5:5:15.03:149,15,0	1/1:0,3:3:9.03:107,9,0	1/1:0,8:8:24.05:258,24,0	./.
chr10	62089302	.	CA	C	7642.30	PASS	AB=0.550;AC=51;AF=0.911;AN=56;BaseQRankSum=-3.733;DP=438;FS=18.070;HRun=11;HaplotypeScore=49.9628;InbreedingCoeff=0.6964;MQ=60.89;MQ0=12;MQRankSum=-2.610;QD=18.33;ReadPosRankSum=2.908;VQSLOD=3.9865;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,28:30:74.91:615,75,0	1/1:1,7:8:17.98:148,18,0	0/0:11,0:7:13.32:0,13,115	0/0:10,0:7:6.61:0,7,104	1/1:0,14:14:29.96:246,30,0	1/1:2,10:12:23.96:197,24,0	1/1:0,21:22:61.97:498,62,0	1/1:6,20:25:59.88:491,60,0	1/1:3,3:7:11.01:80,11,0	1/1:4,6:9:17.97:148,18,0	1/1:2,7:9:17.91:140,18,0	1/1:3,10:13:26.96:221,27,0	1/1:2,16:17:41.93:345,42,0	1/1:1,22:23:56.93:467,57,0	1/1:1,17:19:49.96:400,50,0	1/1:3,7:8:20.97:172,21,0	1/1:2,26:26:74.91:615,75,0	1/1:7,14:19:30.64:304,31,0	1/1:6,14:18:44.21:368,44,0	1/1:3,11:14:29.91:240,30,0	1/1:1,19:20:47.94:394,48,0	1/1:2,9:10:23.96:196,24,0	0/1:2,9:11:8.02:148,0,8	1/1:6,14:19:35.96:296,36,0	1/1:1,7:8:17.90:148,18,0	1/1:0,20:20:59.92:492,60,0	1/1:2,12:14:23.95:197,24,0	1/1:1,4:4:8.99:74,9,0
chr10	62091158	.	CT	C	983.69	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.869;DP=782;FS=0.716;HRun=3;HaplotypeScore=71.2612;InbreedingCoeff=0.9997;MQ=72.02;MQ0=1;MQRankSum=-0.929;QD=30.74;ReadPosRankSum=1.765;VQSLOD=3.5496;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,120,1707	0/0:14,0:14:39.12:0,39,545	0/0:31,0:29:78.17:0,78,1069	0/0:27,0:27:70.30:0,70,989	0/0:19,0:19:57.19:0,57,820	0/0:29,0:29:87.29:0,87,1253	0/0:26,0:26:69.23:0,69,991	0/0:38,0:38:99:0,111,1522	1/1:0,32:32:87.27:1079,87,0	0/0:22,0:22:63.21:0,63,891	0/0:23,0:23:69.22:0,69,976	0/0:31,0:31:90.30:0,90,1291	0/0:35,0:35:99:0,105,1476	0/0:35,0:35:99:0,105,1509	0/0:50,0:50:99:0,150,2125	0/0:32,0:32:96.32:0,96,1382	0/0:18,0:18:51.17:0,51,734	0/0:22,0:22:63.21:0,63,907	0/0:18,0:18:51.17:0,51,734	0/0:26,0:26:78.25:0,78,1104	0/0:44,0:44:99:0,123,1735	0/0:19,0:19:57.19:0,57,821	0/0:20,0:20:60.19:0,60,844	0/0:26,0:26:72.24:0,72,1036	0/0:26,0:26:75.25:0,75,1065	0/0:36,0:36:99:0,108,1538	0/0:28,0:28:81.25:0,81,1131	0/0:14,0:14:33.11:0,33,475
chr10	62091383	.	C	CTTTTTATT	941.78	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=0.328;DP=613;FS=7.580;HRun=0;HaplotypeScore=159.4441;InbreedingCoeff=0.9536;MQ=67.87;MQ0=2;MQRankSum=-4.740;QD=55.40;ReadPosRankSum=-1.164;VQSLOD=2.7809;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:44:99:0,107,2261	0/0:7,0:7:12.04:0,12,327	0/0:18,0:13:19.73:0,20,298	0/0:16,0:15:23.31:0,23,359	0/0:19,0:21:48.12:0,48,998	0/0:15,0:17:49.95:0,50,1011	0/0:24,0:27:66.17:0,66,1446	0/0:33,0:33:63.14:0,63,1110	1/1:3,14:17:27.56:1036,28,0	0/0:27,0:26:69.18:0,69,1356	0/0:16,0:18:39.86:0,40,944	0/0:20,0:20:51.07:0,51,1098	0/0:16,0:16:42.11:0,42,1052	0/0:21,0:21:51.94:0,52,1182	0/0:14,0:17:36.07:0,36,900	0/0:18,0:18:48.05:0,48,892	0/0:29,0:30:41.23:0,41,1711	0/0:23,0:24:69.16:0,69,1556	0/0:20,0:20:31.86:0,32,810	0/0:28,0:30:78.01:0,78,1619	0/0:19,0:20:36.97:0,37,790	0/0:16,0:18:47.91:0,48,918	0/0:17,0:20:58.06:0,58,1377	0/0:23,0:25:71.23:0,71,1541	0/0:11,0:16:32.57:0,33,578	0/0:26,0:28:75.16:0,75,1365	0/0:29,0:31:81.68:0,82,1622	0/0:11,0:11:17.96:0,18,370
chr10	62092652	.	TTG	T	1023.30	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=9.220;DP=717;FS=3.283;HRun=0;HaplotypeScore=87.0128;InbreedingCoeff=0.9937;MQ=83.74;MQ0=0;MQRankSum=-1.939;QD=29.24;ReadPosRankSum=-0.609;VQSLOD=5.1125;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,105,2011	0/0:8,0:8:21.07:0,21,406	0/0:26,0:26:78.23:0,78,1393	0/0:20,0:20:60.18:0,60,1100	0/0:28,0:28:81.22:0,81,1434	0/0:24,0:24:69.12:0,69,1224	0/0:12,0:12:36.12:0,36,687	0/0:37,0:37:99:0,108,2044	1/1:6,29:35:93.17:1118,93,0	0/0:38,0:38:99:0,114,2174	0/0:17,0:17:51.17:0,51,984	0/0:23,0:23:69.22:0,69,1288	0/0:26,0:26:78.27:0,78,1506	0/0:24,0:24:72.23:0,72,1356	0/0:36,0:36:99:0,108,2073	0/0:29,0:29:87.27:0,87,1590	0/0:29,0:29:87.30:0,87,1664	0/0:15,0:15:42.14:0,42,810	0/0:20,0:20:57.16:0,57,1011	0/0:34,0:34:99:0,102,1969	0/0:38,0:38:99:0,108,2051	0/0:14,0:14:36.12:0,36,693	0/0:23,0:23:69.22:0,69,1299	0/0:27,0:27:81.26:0,81,1530	0/0:22,0:22:66.23:0,66,1275	0/0:34,0:34:99:0,99,1851	0/0:34,0:34:99:0,102,1970	0/0:8,0:8:24.08:0,24,463
chr10	62092657	.	T	TC	977.01	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=9.090;DP=701;FS=3.455;HRun=0;HaplotypeScore=70.3591;InbreedingCoeff=0.9942;MQ=84.66;MQ0=0;MQRankSum=-5.280;QD=31.52;ReadPosRankSum=-0.059;VQSLOD=3.2163;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,105,1466	0/0:7,0:7:21.07:0,21,294	0/0:26,0:26:74.80:0,75,955	0/0:19,0:19:57.18:0,57,769	0/0:27,0:27:78.26:0,78,1085	0/0:24,0:24:66.22:0,66,923	0/0:10,0:10:30.10:0,30,419	0/0:37,0:37:99:0,111,1493	1/1:2,29:31:87.23:1072,87,0	0/0:39,0:39:99:0,114,1592	0/0:18,0:18:51.17:0,51,713	0/0:21,0:21:63.21:0,63,881	0/0:26,0:26:78.26:0,78,1091	0/0:23,0:23:69.23:0,69,964	0/0:36,0:36:99:0,108,1493	0/0:31,0:31:93.31:0,93,1301	0/0:29,0:29:87.29:0,87,1215	0/0:14,0:14:42.14:0,42,587	0/0:17,0:17:51.17:0,51,714	0/0:32,0:32:96.29:0,96,1309	0/0:37,0:37:99:0,108,1493	0/0:11,0:11:33.11:0,33,462	0/0:23,0:23:66.22:0,66,923	0/0:27,0:27:81.25:0,81,1113	0/0:23,0:23:66.22:0,66,923	0/0:32,0:32:87.29:0,87,1217	0/0:36,0:36:99:0,105,1451	0/0:9,0:9:27.09:0,27,377
chr10	62093597	.	CT	C	8905.13	PASS	AB=0.937;AC=43;AF=0.768;AN=56;BaseQRankSum=7.424;DP=584;FS=0.000;HRun=10;HaplotypeScore=83.1992;InbreedingCoeff=0.6576;MQ=74.06;MQ0=0;MQRankSum=-3.548;QD=18.67;ReadPosRankSum=2.582;VQSLOD=5.5166;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,19:22:50.99:443,51,0	0/1:14,0:14:1.96:13,0,2	0/1:13,4:17:76.86:77,0,104	0/0:8,0:9:20.93:0,21,197	1/1:3,15:18:41.98:365,42,0	1/1:4,17:21:44.97:391,45,0	1/1:4,21:25:59.98:521,60,0	0/1:29,0:29:10.13:10,0,26	1/1:10,0:10:3.29:10,3,0	1/1:3,27:30:80.98:703,81,0	1/1:2,24:27:74.02:631,74,0	1/1:2,12:14:5.81:279,6,0	1/1:3,12:15:38.94:331,39,0	1/1:2,15:17:32.97:286,33,0	1/1:0,19:19:53.99:469,54,0	1/1:1,22:23:62.93:547,63,0	0/0:32,0:32:2.42:0,2,45	1/1:1,17:18:47.99:416,48,0	1/1:2,18:20:23.80:435,24,0	1/1:6,25:31:41.80:592,42,0	1/1:4,10:14:29.98:260,30,0	0/0:22,1:23:25.15:0,25,495	0/0:25,0:25:63.17:0,63,696	0/0:18,0:18:42.07:0,42,450	1/1:2,15:17:14.80:358,15,0	1/1:4,27:32:85.29:734,85,0	1/1:1,23:24:65.99:573,66,0	1/1:1,19:20:26.81:462,27,0
chr10	62093605	.	TTTG	T	861.32	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=0.573;DP=579;FS=0.484;HRun=0;HaplotypeScore=136.4135;InbreedingCoeff=0.9971;MQ=72.70;MQ0=0;MQRankSum=0.674;QD=9.90;ReadPosRankSum=-0.939;VQSLOD=3.0031;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:53.93:0,54,455	1/1:13,0:13:29.21:124,29,0	0/0:13,0:13:21.15:0,21,311	0/0:11,0:11:26.86:0,27,374	0/0:17,0:17:50.99:0,51,441	0/0:20,0:20:50.98:0,51,459	0/0:22,0:22:59.97:0,60,510	1/1:34,1:35:63.46:395,63,0	1/1:0,10:10:21.07:309,21,0	0/0:27,0:27:74.99:0,75,646	0/0:28,0:28:77.30:0,77,668	0/0:14,0:14:42:0,42,395	0/0:14,0:14:35.99:0,36,308	0/0:20,0:20:42.02:0,42,431	0/0:23,0:23:65.92:0,66,552	0/0:25,0:25:69.01:0,69,643	1/1:29,0:29:49.63:194,50,0	0/0:18,0:18:44.97:0,45,383	0/0:22,0:22:63:0,63,593	0/0:27,0:27:69.01:0,69,643	0/0:11,0:11:29.97:0,30,253	0/0:21,0:21:54.12:0,54,989	0/0:25,0:25:69.18:0,69,1287	0/0:17,0:17:39.09:0,39,721	0/0:17,0:17:48:0,48,448	0/0:31,0:31:86.11:0,86,729	0/0:27,0:27:74.94:0,75,648	0/0:21,0:21:59.93:0,60,538
chr10	62093606	.	TTG	T	2402.05	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-6.443;DP=577;FS=0.436;HRun=0;HaplotypeScore=119.3216;InbreedingCoeff=0.9949;MQ=73.46;MQ0=0;MQRankSum=0.800;QD=27.61;ReadPosRankSum=-1.879;VQSLOD=4.1479;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:53.76:0,54,285	1/1:1,12:13:36.06:454,36,0	0/0:13,0:13:16.17:0,16,240	0/0:12,0:12:29.62:0,30,327	0/0:17,0:17:49.04:0,49,268	0/0:19,0:19:49.13:0,49,287	0/0:22,0:22:59.44:0,59,311	1/1:4,31:35:99:1118,101,0	1/1:10,0:10:20.77:137,21,0	0/0:27,0:27:72.30:0,72,374	0/0:28,0:28:60.80:0,61,394	0/0:14,0:14:40.51:0,41,253	0/0:14,0:14:34.03:0,34,175	0/0:20,0:20:45.55:0,46,306	0/0:23,0:23:63.73:0,64,363	0/0:25,0:25:68.34:0,68,406	1/1:2,27:29:63.13:854,63,0	0/0:19,0:19:49.84:0,50,260	0/0:21,0:21:60.77:0,61,374	0/0:27,0:27:64.42:0,64,388	0/0:10,0:10:28.75:0,29,147	0/0:20,0:20:56.14:0,56,837	0/0:25,0:25:72.19:0,72,1124	0/0:17,0:17:45.07:0,45,654	0/0:17,0:17:49.10:0,49,296	0/0:31,0:31:75.59:0,76,405	0/0:27,0:27:74.09:0,74,406	0/0:21,0:21:57.60:0,58,331
chr10	62093607	.	TG	T	1534.16	PASS	AB=0.998;AC=27;AF=0.482;AN=56;BaseQRankSum=8.864;DP=574;FS=2.189;HRun=1;HaplotypeScore=109.2962;InbreedingCoeff=-0.0356;MQ=72.80;MQ0=0;MQRankSum=-1.750;QD=3.55;ReadPosRankSum=6.139;VQSLOD=0.4322;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:21,0:21:12.47:12,0,23	1/1:12,1:13:35.06:238,35,0	0/1:13,0:13:47.24:47,0,176	0/0:11,0:11:29.66:0,30,279	0/1:17,0:17:7.77:8,0,40	0/1:19,0:19:7.63:8,0,32	0/1:22,0:22:9.76:10,0,11	1/1:32,2:34:98.39:690,98,0	1/1:10,0:10:19.89:96,20,0	0/0:27,0:27:8.02:0,8,24	0/1:28,0:28:21.39:21,0,48	0/1:14,0:14:4.77:5,0,51	1/1:13,1:14:14.34:42,14,0	0/0:21,0:21:0.13:0,0,97	0/1:24,0:24:6.37:6,0,92	0/1:25,0:25:6.06:6,0,53	1/1:27,0:27:62.02:390,62,0	0/1:19,0:19:17.32:17,0,23	0/0:22,0:22:14.36:0,14,125	0/1:27,0:27:24.07:24,0,37	1/1:10,0:10:9.06:23,9,0	0/0:20,0:20:53.38:0,53,665	0/0:24,0:24:72.12:0,72,885	0/0:17,0:17:45.07:0,45,544	0/1:17,0:17:7.14:7,0,49	0/1:29,1:30:21.46:21,0,33	0/1:27,0:27:17.95:18,0,59	0/1:21,0:21:20:21,0,20
chr10	62094191	.	T	TTCAC	540.77	PASS	AC=2;AF=0.042;AN=48;BaseQRankSum=-5.095;DP=558;FS=1.414;HRun=0;HaplotypeScore=87.3922;InbreedingCoeff=0.7410;MQ=69.71;MQ0=6;MQRankSum=0.317;QD=36.05;ReadPosRankSum=1.183;VQSLOD=3.8224;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:75.22:0,75,1116	./.	./.	0/0:33,0:29:9.01:0,9,89	1/1:7,8:15:27.09:633,27,0	0/0:23,0:23:33.10:0,33,489	0/0:20,0:20:30.05:0,30,418	./.	0/0:27,0:27:45.13:0,45,657	0/0:18,0:18:27.09:0,27,402	0/0:9,0:9:12.04:0,12,185	0/0:17,0:17:30.07:0,30,424	0/0:32,0:32:51.15:0,51,750	0/0:14,0:14:18.04:0,18,239	0/0:19,0:19:33.06:0,33,446	0/0:29,0:29:48.12:0,48,646	./.	0/0:17,0:17:36.08:0,36,509	0/0:20,0:17:9.03:0,9,140	0/0:22,0:22:36.10:0,36,517	0/0:28,0:28:51.16:0,51,770	0/0:18,0:18:42.13:0,42,627	0/0:7,0:7:9.02:0,9,118	0/0:24,0:24:42.10:0,42,587	0/0:11,0:11:15.05:0,15,233	0/0:23,0:23:36.11:0,36,521	0/0:19,0:18:36.10:0,36,517	0/0:2,0:2:6.02:0,6,93
chr10	62095431	.	GAGAC	G	5864.26	PASS	AB=1.000;AC=41;AF=0.788;AN=52;BaseQRankSum=6.084;DP=608;FS=11.616;HRun=0;HaplotypeScore=107.6637;InbreedingCoeff=0.6353;MQ=72.60;MQ0=8;MQRankSum=1.312;QD=11.15;ReadPosRankSum=-3.229;VQSLOD=2.8327;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:42,0:42:3.01:37,3,0	./.	0/0:28,0:24:5.99:0,6,53	0/1:28,0:21:0.87:1,0,83	0/1:24,0:24:0.01:0,0,0	1/1:6,20:26:27.09:431,27,0	1/1:9,8:17:3.01:48,3,0	1/1:22,8:28:23.98:278,24,0	0/1:19,0:19:4.50:4,0,24	1/1:11,6:17:15.05:237,15,0	1/1:8,6:14:3.01:48,3,0	1/1:3,18:21:18.06:287,18,0	1/1:5,18:22:21.07:336,21,0	1/1:8,9:17:15.05:239,15,0	1/1:5,11:16:9.03:144,9,0	1/1:5,4:8:12.04:192,12,0	1/1:10,30:39:48.16:766,48,0	1/1:10,7:17:12.15:436,12,0	1/1:18,13:30:39.13:613,39,0	1/1:5,7:10:6.02:96,6,0	1/1:20,27:47:24.08:383,24,0	0/0:12,0:12:12.02:0,12,232	0/0:5,0:3:9.03:0,9,179	0/0:29,1:30:27.35:0,27,1333	1/1:7,10:18:18.06:287,18,0	1/1:11,11:22:33.11:523,33,0	1/1:11,24:35:29.75:479,30,0	./.
chr10	62095449	.	GACAGACAGAC	G	110.42	PASS	AB=0.694;AC=3;AF=0.054;AN=56;BaseQRankSum=2.051;DP=561;FS=4.067;HRun=0;HaplotypeScore=163.1970;InbreedingCoeff=0.1453;MQ=57.73;MQ0=12;MQRankSum=-2.987;QD=1.40;ReadPosRankSum=-1.049;VQSLOD=2.6070;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:6,25:37:11.96:85,0,12	0/0:5,0:6:3.01:0,3,97	0/0:13,0:10:17.90:0,18,328	0/0:17,0:9:20.28:0,20,543	0/1:3,11:21:0.28:0,0,0	0/0:24,0:25:39.13:0,39,758	0/0:19,0:19:32.12:0,32,519	0/0:25,0:20:57.03:0,57,991	0/1:20,0:20:97.12:113,0,97	0/0:14,0:14:39.09:0,39,570	0/0:11,0:11:15.03:0,15,260	0/0:22,0:22:30.10:0,30,589	0/0:22,0:21:29.96:0,30,589	0/0:16,0:16:36.12:0,36,736	0/0:17,0:17:24.06:0,24,410	0/0:7,0:6:15.05:0,15,329	0/0:37,0:36:66.22:0,66,1311	0/0:17,0:16:26.14:0,26,678	0/0:28,0:25:72.06:0,72,1202	0/0:10,0:8:6.02:0,6,124	0/0:49,0:49:80.99:0,81,1467	0/0:8,0:8:24.08:0,24,769	0/0:6,0:4:12.04:0,12,493	0/0:31,0:31:84.29:0,84,3577	0/0:15,0:15:30.09:0,30,568	0/0:18,0:18:51.12:0,51,876	0/0:37,0:37:63.68:0,64,1152	0/0:11,0:11:33.11:0,33,463
chr10	62095453	.	GACAGAC	G	278.12	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=3.826;DP=573;FS=9.405;HRun=0;HaplotypeScore=136.0113;InbreedingCoeff=0.6855;MQ=57.09;MQ0=13;MQRankSum=-2.941;QD=3.43;ReadPosRankSum=-0.685;VQSLOD=2.0633;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:39,0:38:3.01:43,3,0	0/0:6,0:6:3.01:0,3,58	0/0:11,0:6:12.04:0,12,186	0/0:25,0:13:24.66:0,25,449	0/1:21,0:21:0.17:0,0,0	0/0:26,0:26:35.41:0,35,277	0/0:17,0:17:25.70:0,26,345	0/0:30,0:25:71.09:0,71,874	1/1:15,5:21:24.07:343,24,0	0/0:12,0:12:31.20:0,31,279	0/0:11,0:11:14.64:0,15,196	0/0:23,0:23:27.60:0,28,246	0/0:23,0:22:29.81:0,30,237	0/0:16,0:16:33.98:0,34,370	0/0:18,0:18:25.85:0,26,285	0/0:8,0:7:16.41:0,16,140	0/0:37,0:36:59.60:0,60,440	0/0:17,0:16:8.07:0,8,248	0/0:27,0:25:67.33:0,67,542	0/0:10,0:8:5.19:0,5,20	0/0:52,0:52:80.70:0,81,936	0/0:8,0:8:21.07:0,21,514	0/0:6,0:4:12.04:0,12,335	0/0:32,0:32:89.89:0,90,2489	0/0:14,0:14:24.58:0,25,152	0/0:17,0:17:46.95:0,47,386	0/0:34,0:35:56.05:0,56,533	0/0:11,0:11:30.10:0,30,422
chr10	62095459	.	C	CAG	876.69	PASS	AB=0.982;AC=12;AF=0.214;AN=56;BaseQRankSum=3.355;DP=589;FS=12.563;HRun=0;HaplotypeScore=109.7008;InbreedingCoeff=0.2342;MQ=56.55;MQ0=14;MQRankSum=0.524;QD=4.45;ReadPosRankSum=-1.024;VQSLOD=1.9895;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:39,3:41:3:37,3,0	0/0:5,0:5:3.01:0,3,43	0/0:16,0:6:18.03:0,18,219	0/0:31,0:18:9.58:0,10,214	1/1:23,0:23:6:57,6,0	0/0:26,0:26:37.85:0,38,302	0/0:17,0:17:23.93:0,24,296	0/1:30,0:25:99:209,0,527	1/1:21,0:21:24.39:246,24,0	0/1:9,0:9:80.52:128,0,81	0/0:11,0:11:8.90:0,9,101	0/0:23,0:23:26.28:0,26,218	0/0:21,1:21:29.12:0,29,232	0/0:16,0:16:29.43:0,29,288	0/0:16,0:16:20.67:0,21,216	0/0:9,1:9:20.53:0,21,187	0/0:42,1:42:65.95:0,66,516	0/1:15,2:16:83.97:84,0,243	0/1:25,0:23:99:102,0,261	0/0:8,1:8:5.75:0,6,30	0/0:50,0:50:83.07:0,83,909	0/0:5,0:5:12.02:0,12,153	0/0:6,0:4:12.04:0,12,170	0/0:37,0:37:90.98:0,91,1301	0/1:12,0:12:8.54:9,0,45	0/1:18,0:18:99:160,0,285	0/0:36,0:36:55.39:0,55,502	0/0:12,0:12:36.12:0,36,504
chr10	62095469	.	CAG	C	135.33	PASS	AB=0.923;AC=4;AF=0.071;AN=56;BaseQRankSum=1.697;DP=640;FS=11.060;HRun=0;HaplotypeScore=121.7770;InbreedingCoeff=0.4601;MQ=58.84;MQ0=14;MQRankSum=0.798;QD=1.19;ReadPosRankSum=-4.148;VQSLOD=0.2415;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:33,5:37:6.19:74,0,6	0/0:5,0:5:3.01:0,3,55	0/0:22,0:11:19.63:0,20,333	0/1:49,1:25:2.92:3,0,469	1/1:16,8:24:11.93:160,12,0	0/0:27,0:27:48.15:0,48,733	0/0:19,0:19:39.07:0,39,656	0/0:37,0:32:92.02:0,92,1513	0/0:26,0:26:36.55:0,37,517	0/0:14,0:14:40.84:0,41,586	0/0:8,0:8:9.03:0,9,154	0/0:21,0:21:27.09:0,27,429	0/0:23,0:22:35.89:0,36,536	0/0:17,0:17:36.12:0,36,598	0/0:14,0:14:21.07:0,21,352	0/0:11,0:10:24.08:0,24,386	0/0:44,0:43:87.30:0,87,1401	0/0:15,0:14:38.94:0,39,542	0/0:32,0:29:79.80:0,80,1235	0/0:10,0:9:12.03:0,12,160	0/0:52,0:52:96.33:0,96,1642	0/0:3,0:3:9.03:0,9,165	0/0:6,0:5:12.04:0,12,210	0/0:37,0:37:90.26:0,90,1533	0/0:12,0:12:21.07:0,21,304	0/0:20,0:20:58.29:0,58,876	0/0:39,0:39:75.16:0,75,1199	0/0:12,0:12:36.12:0,36,659
chr10	62095471	.	G	GAGAC	232.77	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=2.108;DP=654;FS=6.112;HRun=0;HaplotypeScore=142.1990;InbreedingCoeff=0.6199;MQ=58.14;MQ0=16;MQRankSum=-1.309;QD=1.92;ReadPosRankSum=-3.785;VQSLOD=0.7756;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:27,11:37:6.77:85,7,0	0/0:5,0:5:3.01:0,3,54	0/0:30,0:12:20.55:0,21,327	0/1:56,0:28:13.45:13,0,436	1/1:22,2:25:14.68:250,15,0	0/0:27,0:27:47.35:0,47,700	0/0:21,0:21:38.71:0,39,633	0/0:39,0:34:93.03:0,93,1363	0/0:26,0:26:36.43:0,36,363	0/0:15,0:15:34.66:0,35,476	0/0:8,0:8:9.03:0,9,162	0/0:20,0:20:27.09:0,27,481	0/0:22,0:21:35.32:0,35,560	0/0:17,0:17:36.12:0,36,616	0/0:15,0:15:24.07:0,24,401	0/0:11,0:10:24.08:0,24,426	0/0:43,0:41:85.72:0,86,1443	0/0:15,0:14:23.75:0,24,438	0/0:31,0:28:69.08:0,69,1001	0/0:10,0:9:12.03:0,12,178	0/0:51,0:51:96.05:0,96,1678	0/0:3,0:3:9.02:0,9,122	0/0:6,0:5:12.03:0,12,179	0/0:32,0:33:77.06:0,77,1271	0/0:12,0:12:19.49:0,19,259	0/0:21,0:21:51.95:0,52,751	0/0:40,0:40:74.81:0,75,1217	0/0:12,0:12:36.12:0,36,647
chr10	62095481	.	C	CAG	464.18	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.828;DP=694;FS=4.803;HRun=0;HaplotypeScore=134.5252;InbreedingCoeff=0.7178;MQ=63.56;MQ0=12;MQRankSum=-0.443;QD=16.58;ReadPosRankSum=-1.386;VQSLOD=2.9809;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:34:14.77:0,15,163	0/0:3,0:3:6.02:0,6,86	0/0:50,1:28:54.80:0,55,679	0/0:85,0:48:35.50:0,36,844	0/0:22,0:22:20.80:0,21,256	0/0:26,0:26:51.15:0,51,710	0/0:20,0:20:26.70:0,27,583	0/0:42,0:39:99:0,102,1407	1/1:2,26:28:33.11:559,33,0	0/0:14,0:14:42.13:0,42,581	0/0:8,0:8:9.03:0,9,129	0/0:19,0:19:30.10:0,30,422	0/0:22,0:22:39.13:0,39,559	0/0:21,0:21:51.16:0,51,709	0/0:18,0:18:33.08:0,33,436	0/0:13,0:13:30.07:0,30,394	0/0:37,0:36:93.31:0,93,1330	0/0:14,0:13:39.09:0,39,522	0/0:30,0:28:72.24:0,72,1027	0/0:8,0:8:12.04:0,12,172	0/0:51,0:51:99:0,114,1596	0/0:2,0:2:5.89:0,6,58	0/0:4,0:4:9.03:0,9,129	0/0:28,0:28:78.26:0,78,1108	0/0:13,0:13:30.05:0,30,371	0/0:24,0:24:63.19:0,63,867	0/0:40,0:40:81.04:0,81,1158	0/0:14,0:13:39.13:0,39,558
chr10	62095994	.	G	GT	6925.84	PASS	AB=0.938;AC=46;AF=0.821;AN=56;BaseQRankSum=-2.751;DP=522;FS=11.957;HRun=9;HaplotypeScore=98.0402;InbreedingCoeff=0.6819;MQ=57.31;MQ0=15;MQRankSum=-0.814;QD=15.88;ReadPosRankSum=4.464;VQSLOD=3.8960;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,0:11:14.72:102,15,0	1/1:6,0:10:20.04:94,20,0	0/1:58,0:21:3.46:3,0,110	0/0:64,0:21:12.28:0,12,134	1/1:16,2:19:26.46:181,26,0	1/1:6,13:19:48.13:527,48,0	1/1:1,2:3:8.69:77,9,0	0/1:23,0:24:7.88:67,0,8	1/1:12,0:17:38.37:183,38,0	1/1:3,15:19:34.44:328,34,0	1/1:3,11:13:33.09:363,33,0	1/1:2,1:3:3.01:33,3,0	1/1:3,14:15:39.11:430,39,0	1/1:2,7:10:18.04:192,18,0	1/1:9,16:24:50.50:539,51,0	1/1:3,14:18:44.62:455,45,0	1/1:10,0:30:37.50:192,37,0	1/1:2,7:9:21.06:232,21,0	1/1:11,7:15:30.08:330,30,0	1/1:1,19:18:53.63:567,54,0	1/1:3,7:10:21.53:233,22,0	0/0:3,0:3:6.88:0,7,54	0/0:11,0:10:26.99:0,27,235	0/0:6,0:6:3:0,3,26	1/1:3,17:20:48.08:516,48,0	1/1:3,13:15:33.09:364,33,0	1/1:7,18:24:48.11:517,48,0	1/1:6,9:15:39.11:401,39,0
chr10	62095998	.	T	TTTTTTTC	2141.16	PASS	AB=1.000;AC=22;AF=0.393;AN=56;BaseQRankSum=-4.217;DP=521;FS=9.708;HRun=0;HaplotypeScore=158.5949;InbreedingCoeff=0.0451;MQ=56.11;MQ0=18;MQRankSum=-2.895;QD=6.07;ReadPosRankSum=-3.901;VQSLOD=0.8681;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:3,7:10:14.98:389,15,0	1/1:10,0:10:14.14:46,14,0	0/1:56,0:17:6.72:7,0,157	0/0:67,0:21:5.36:0,5,136	1/1:4,15:23:33.11:845,33,0	0/1:19,0:19:14.09:14,0,201	0/0:3,0:3:3.75:0,4,45	0/1:29,0:25:39.24:39,0,77	1/1:14,0:17:17.62:467,18,0	0/0:20,0:19:19.69:0,20,184	0/0:14,0:13:27.89:0,28,207	0/0:3,0:3:3:0,3,27	0/0:18,0:16:11.59:0,12,280	0/0:9,0:9:14.79:0,15,124	0/1:21,0:20:35.55:36,0,249	0/1:18,0:18:99:124,0,171	1/1:26,0:26:23.85:81,24,0	0/0:9,0:9:21:0,21,190	0/1:21,0:18:35.33:35,0,163	0/1:20,0:18:47.60:48,0,289	0/1:9,0:9:12.87:13,0,121	0/0:3,0:3:6.91:0,7,142	0/0:13,0:11:33.03:0,33,563	0/0:8,0:8:6.01:0,6,63	0/1:20,0:20:56.18:56,0,252	0/1:16,0:15:33.72:34,0,180	0/1:22,0:21:4.18:4,0,259	0/1:16,0:15:81.82:82,0,221
chr10	62096017	.	TTC	T	44.82	PASS	AB=0.977;AC=7;AF=0.125;AN=56;BaseQRankSum=1.622;DP=535;FS=9.059;HRun=0;HaplotypeScore=124.5234;InbreedingCoeff=0.0382;MQ=49.51;MQ0=16;MQRankSum=-4.579;QD=0.31;ReadPosRankSum=-1.749;VQSLOD=1.7181;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:13,0:13:0.10:0,0,173	0/1:10,0:10:19.51:20,0,40	0/1:50,0:11:3.59:4,0,122	0/0:67,0:18:9.30:0,9,72	0/0:28,0:28:12.38:0,12,386	0/0:18,0:18:43.14:0,43,302	0/0:6,0:6:13.57:0,14,74	0/1:30,0:26:17.96:18,0,157	1/1:17,0:17:5.79:74,6,0	0/0:21,1:21:4:0,4,251	0/0:19,0:19:41.08:0,41,287	0/0:3,0:3:0.23:0,0,29	0/0:18,0:16:46.91:0,47,426	0/0:9,0:9:5.68:0,6,79	0/0:20,0:19:52.28:0,52,384	0/0:15,0:15:30.44:0,30,195	0/1:20,3:23:41.80:42,0,127	0/0:11,0:11:16.86:0,17,156	0/0:23,0:21:26.76:0,27,288	0/0:21,0:19:26.57:0,27,373	0/0:9,0:9:5.41:0,5,112	0/0:7,0:7:1.52:0,2,81	0/0:16,0:14:29.78:0,30,255	0/0:9,0:9:3:0,3,29	0/0:20,0:20:35:0,35,279	0/0:15,0:14:36.47:0,36,257	0/0:22,0:22:1.59:0,2,222	0/0:14,0:13:38.26:0,38,293
chr10	62098673	.	CAAGA	C	780.93	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.800;DP=690;FS=11.298;HRun=0;HaplotypeScore=107.7585;InbreedingCoeff=0.9997;MQ=90.81;MQ0=0;MQRankSum=-2.013;QD=43.38;ReadPosRankSum=1.521;VQSLOD=3.6719;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:25:69.23:0,69,1765	0/0:15,0:15:45.15:0,45,1197	0/0:30,0:30:84.29:0,84,2002	0/0:24,0:24:68.69:0,69,1579	0/0:34,0:34:99:0,102,2614	0/0:32,0:32:93.32:0,93,2437	0/0:29,0:29:81.26:0,81,2044	0/0:38,0:38:99:0,99,2583	1/1:1,17:18:48.16:876,48,0	0/0:21,0:21:63.22:0,63,1624	0/0:20,0:20:57.20:0,57,1490	0/0:31,0:31:93.31:0,93,2417	0/0:22,0:22:60.21:0,60,1564	0/0:23,0:23:69.23:0,69,1788	0/0:18,0:18:51.18:0,51,1341	0/0:23,0:23:66.23:0,66,1734	0/0:27,0:27:78.27:0,78,1969	0/0:17,0:17:45.15:0,45,1131	0/0:26,0:26:72.25:0,72,1797	0/0:25,0:25:69.24:0,69,1840	0/0:24,0:24:69.22:0,69,1758	0/0:20,0:20:54.19:0,54,1406	0/0:25,0:25:75.26:0,75,1951	0/0:15,0:15:42.14:0,42,1081	0/0:26,0:25:72.24:0,72,1837	0/0:36,0:36:99:0,99,2605	0/0:34,0:32:99:0,102,2633	0/0:12,0:12:33.11:0,33,838
chr10	62099554	.	A	AT	10117.69	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-12.352;DP=546;FS=0.000;HRun=8;HaplotypeScore=51.2740;InbreedingCoeff=0.9949;MQ=73.57;MQ0=5;MQRankSum=2.092;QD=28.18;ReadPosRankSum=3.554;VQSLOD=4.9836;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,14:14:42.12:485,42,0	0/0:12,0:12:32.99:0,33,291	0/0:34,0:15:24.66:0,25,168	0/0:26,0:13:16.51:0,17,103	1/1:2,22:24:65.95:694,66,0	1/1:1,22:23:54.16:624,54,0	1/1:2,15:17:42.12:485,42,0	0/0:24,0:24:56.98:0,57,507	0/0:16,0:16:44.61:0,45,393	1/1:7,20:27:60.16:674,60,0	1/1:2,22:24:63.06:690,63,0	1/1:0,13:13:36.11:416,36,0	1/1:1,14:15:36.11:416,36,0	1/1:1,10:11:21.06:243,21,0	1/1:3,13:16:24.07:278,24,0	1/1:1,14:15:36.11:416,36,0	0/0:30,0:30:77.93:0,78,698	1/1:1,19:20:48.14:555,48,0	1/1:2,28:30:84.24:961,84,0	1/1:1,28:28:84.11:935,84,0	1/1:1,7:8:18.05:208,18,0	0/0:10,0:10:23.98:0,24,211	0/0:17,0:17:41.74:0,42,363	0/0:18,0:18:44.97:0,45,403	1/1:2,16:18:48.14:555,48,0	1/1:4,20:24:57.13:629,57,0	1/1:4,17:21:51.12:574,51,0	1/1:2,8:10:24.07:277,24,0
chr10	62099965	.	G	GT	18846.05	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-11.301;DP=615;FS=12.868;HRun=4;HaplotypeScore=57.1988;InbreedingCoeff=0.9957;MQ=81.44;MQ0=0;MQRankSum=-4.692;QD=35.90;ReadPosRankSum=3.511;VQSLOD=4.3106;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,13:13:36.12:492,36,0	1/1:1,10:11:27.09:369,27,0	0/0:14,0:14:17.47:0,17,348	0/0:19,0:19:45.16:0,45,466	1/1:2,18:20:51.16:683,51,0	1/1:0,14:14:39.13:534,39,0	1/1:3,18:21:54.18:734,54,0	1/1:2,32:34:96.32:1309,96,0	1/1:3,24:27:72.24:985,72,0	1/1:2,27:29:84.24:1111,84,0	1/1:1,23:24:63.21:862,63,0	1/1:2,30:32:81.27:1108,81,0	1/1:3,32:35:87.29:1189,87,0	1/1:3,24:27:69.23:934,69,0	1/1:2,26:28:66.22:903,66,0	1/1:1,22:23:60.20:821,60,0	1/1:1,21:22:57.19:780,57,0	1/1:2,12:14:36.12:492,36,0	1/1:1,16:17:48.12:621,48,0	1/1:2,30:32:90.25:1202,90,0	1/1:0,23:23:63.21:862,63,0	0/0:20,0:20:54.15:0,54,612	0/0:17,0:17:51.15:0,51,577	0/0:20,0:20:54.13:0,54,601	1/1:0,11:11:21.07:287,21,0	1/1:0,27:27:78.25:1050,78,0	1/1:0,31:30:90.30:1231,90,0	1/1:0,10:10:21.07:287,21,0
chr10	62100789	.	T	TA	423.68	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=0.775;DP=559;FS=0.859;HRun=9;HaplotypeScore=94.1682;InbreedingCoeff=0.9478;MQ=77.12;MQ0=3;MQRankSum=-1.367;QD=22.30;ReadPosRankSum=0.996;VQSLOD=4.0034;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:88.10:0,88,775	0/0:9,0:9:11.98:0,12,104	0/0:20,0:15:38.93:0,39,329	0/0:27,0:19:28.32:0,28,205	0/0:21,0:22:53.01:0,53,449	0/0:12,0:12:32.99:0,33,286	0/0:24,0:24:53.98:0,54,469	0/0:20,0:20:50.93:0,51,437	1/1:1,18:19:48.10:519,48,0	0/0:24,0:24:65.99:0,66,573	0/0:15,0:15:35.99:0,36,313	0/0:22,0:22:56.91:0,57,490	0/0:14,0:14:32.86:0,33,282	0/0:25,0:26:61.98:0,62,519	0/0:9,0:9:17.98:0,18,156	0/0:20,0:20:50.98:0,51,443	0/0:24,0:24:62.95:0,63,541	0/0:30,0:30:58.18:0,58,608	0/0:15,0:15:32.98:0,33,286	0/0:19,1:20:20.80:0,21,404	0/0:23,0:23:38.98:0,39,338	0/0:12,0:12:29.99:0,30,260	0/0:21,1:22:26.78:0,27,458	0/0:14,0:14:41.99:0,42,365	0/0:19,0:19:41.98:0,42,364	0/0:24,0:24:71.99:0,72,625	0/0:26,0:25:56.96:0,57,491	0/0:6,0:6:18:0,18,156
chr10	62100813	.	C	CA	12875.97	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-12.245;DP=627;FS=6.360;HRun=8;HaplotypeScore=66.5107;InbreedingCoeff=0.9909;MQ=67.26;MQ0=9;MQRankSum=-1.005;QD=26.88;ReadPosRankSum=2.260;VQSLOD=5.7123;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,38:42:99:1189,105,0	1/1:1,9:10:24.07:276,24,0	0/0:31,0:21:42.43:0,42,359	0/0:32,0:19:27.02:0,27,223	1/1:3,19:23:29.53:576,30,0	1/1:1,13:14:33.10:381,33,0	1/1:2,25:27:60.18:692,60,0	1/1:2,24:26:44.68:727,45,0	0/0:23,0:23:57.02:0,57,518	1/1:6,26:32:50.73:816,51,0	1/1:1,14:15:45.09:501,45,0	1/1:6,20:26:30.21:581,30,0	1/1:3,12:15:30.09:346,30,0	1/1:5,18:24:47.64:510,48,0	1/1:0,8:8:21.06:242,21,0	1/1:1,20:21:57.17:658,57,0	1/1:1,20:21:57.17:658,57,0	1/1:4,21:25:63.17:715,63,0	1/1:2,13:15:39.12:450,39,0	1/1:3,20:23:59.97:655,60,0	1/1:3,21:24:51.15:589,51,0	0/0:17,0:16:45.02:0,45,411	0/0:27,0:27:81.03:0,81,737	0/0:17,0:17:48.03:0,48,439	1/1:5,17:22:20.68:492,21,0	1/1:3,27:30:84.22:943,84,0	1/1:1,27:28:66.38:759,66,0	1/1:3,4:7:11.93:120,12,0
chr10	62102307	.	CTT	C	6210.94	PASS	AB=0.681;AC=46;AF=0.821;AN=56;BaseQRankSum=0.394;DP=497;FS=5.686;HRun=14;HaplotypeScore=98.7991;InbreedingCoeff=0.6542;MQ=61.94;MQ0=9;MQRankSum=-1.329;QD=15.53;ReadPosRankSum=4.315;VQSLOD=4.1762;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,1:19:38.66:182,39,0	1/1:2,0:2:2.98:22,3,0	0/0:39,0:6:9.03:0,9,115	0/0:35,0:9:14.34:0,14,122	1/1:4,0:34:39.14:257,39,0	1/1:5,10:17:24.61:317,25,0	1/1:4,3:7:11.89:105,12,0	1/1:7,20:27:62.82:564,63,0	1/1:6,4:10:14.52:122,15,0	1/1:12,13:24:47.93:488,48,0	1/1:10,13:26:47.32:454,47,0	1/1:7,6:13:10.52:206,11,0	1/1:3,6:9:17.97:166,18,0	0/1:5,6:11:6.55:174,0,7	1/1:5,9:15:38.77:342,39,0	1/1:3,8:11:29.99:268,30,0	1/1:11,19:30:38.93:360,39,0	1/1:8,6:14:29.60:258,30,0	1/1:6,7:13:28.70:239,29,0	1/1:3,13:17:28.27:345,28,0	1/1:4,2:6:14.60:119,15,0	0/0:2,0:7:10.98:0,11,36	0/1:9,2:15:22.82:23,0,126	0/0:3,0:14:19.96:0,20,69	1/1:5,11:17:27.89:384,28,0	1/1:13,11:26:29.20:439,29,0	1/1:14,10:24:34.77:350,35,0	1/1:8,3:11:2.92:28,3,0
chr10	62102346	.	T	TAC	7853.42	PASS	AB=0.760;AC=33;AF=0.611;AN=54;BaseQRankSum=-9.051;DP=531;FS=1.932;HRun=0;HaplotypeScore=95.8293;InbreedingCoeff=0.6930;MQ=67.26;MQ0=8;MQRankSum=-1.512;QD=23.73;ReadPosRankSum=0.948;VQSLOD=5.4800;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:39.12:0,39,465	0/0:7,0:7:21.06:0,21,250	0/0:40,0:16:20.72:0,21,236	0/1:35,0:12:6.44:6,0,78	0/0:27,0:27:54.17:0,54,643	1/1:7,11:19:33.11:521,33,0	1/1:5,7:11:15.05:238,15,0	0/0:27,0:27:54.16:0,54,644	1/1:4,6:11:12.04:190,12,0	1/1:4,10:15:30.10:472,30,0	1/1:7,15:22:11.64:487,12,0	1/1:2,7:9:18.06:286,18,0	1/1:3,9:13:24.08:381,24,0	1/1:7,8:15:30.09:451,30,0	1/1:4,11:16:33.11:525,33,0	1/1:8,12:20:0.32:463,0,0	0/0:22,0:22:45.14:0,45,536	1/1:2,14:16:3.37:537,3,0	1/1:6,12:18:3.36:519,3,0	0/1:13,13:26:68.03:425,0,68	1/1:1,8:10:15.05:239,15,0	0/0:6,0:6:12.04:0,12,143	0/0:25,0:25:17.53:0,18,669	0/0:23,0:22:57.16:0,57,668	0/1:7,12:19:5.67:399,0,6	1/1:13,17:31:60.16:870,60,0	1/1:6,18:24:54.18:844,54,0	./.
chr10	62103149	.	A	AG	3845.45	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=1.490;DP=429;FS=33.309;HRun=1;HaplotypeScore=73.3122;InbreedingCoeff=0.9309;MQ=80.44;MQ0=5;MQRankSum=-2.958;QD=12.69;ReadPosRankSum=2.641;VQSLOD=0.7227;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:13:20.43:139,20,0	1/1:8,0:8:17.66:112,18,0	0/0:47,0:22:46.72:0,47,388	0/0:37,0:18:45.79:0,46,318	1/1:13,2:15:33.28:219,33,0	1/1:26,0:26:45.27:270,45,0	1/1:11,0:11:14.29:87,14,0	1/1:15,1:15:25.24:267,25,0	0/0:10,0:10:30:0,30,288	1/1:11,0:11:15.49:109,15,0	1/1:13,0:13:25.23:133,25,0	1/1:11,0:11:16.76:89,17,0	1/1:19,0:19:40.11:215,40,0	1/1:13,0:13:27.81:173,28,0	1/1:16,0:16:31.44:169,31,0	1/1:13,0:13:28.70:164,29,0	1/1:10,0:10:25.50:161,26,0	1/1:11,0:11:17.44:99,17,0	1/1:23,0:23:63.67:380,64,0	1/1:18,0:18:42.24:298,42,0	1/1:5,0:5:14.63:98,15,0	0/0:8,0:8:9.90:0,10,107	0/0:16,0:16:26.14:0,26,195	0/0:7,0:7:12:0,12,111	1/1:16,0:16:26.18:142,26,0	1/1:15,0:15:39.64:263,40,0	1/1:19,0:19:39.66:218,40,0	1/1:0,1:1:3.01:40,3,0
chr10	62103161	.	CCCT	C	5050.29	PASS	AB=0.861;AC=36;AF=0.643;AN=56;BaseQRankSum=-0.639;DP=442;FS=24.818;HRun=0;HaplotypeScore=74.5507;InbreedingCoeff=0.6567;MQ=74.61;MQ0=6;MQRankSum=-2.478;QD=17.85;ReadPosRankSum=6.035;VQSLOD=2.6660;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:14:11.72:71,12,0	0/1:8,0:8:5.57:6,0,72	0/0:60,0:24:29.59:0,30,465	0/0:47,0:20:28.15:0,28,397	0/1:13,0:13:22.26:57,0,22	1/1:0,20:21:33.09:464,33,0	1/1:0,12:13:12.03:162,12,0	0/0:15,0:14:13.45:0,13,161	0/0:10,0:10:17.12:0,17,132	1/1:0,13:14:29.74:322,30,0	1/1:0,15:15:26.94:357,27,0	1/1:2,8:10:12.02:165,12,0	0/1:2,18:20:3.14:402,0,3	1/1:2,10:12:15.02:210,15,0	1/1:2,16:19:5.41:368,5,0	1/1:1,12:14:23.41:326,23,0	0/1:10,1:11:3.56:4,0,159	1/1:0,12:13:15.04:209,15,0	1/1:5,16:21:31.69:544,32,0	1/1:3,11:14:29.48:281,29,0	1/1:0,6:6:6.02:91,6,0	0/0:9,0:9:11.48:0,11,73	0/0:9,0:9:11.74:0,12,88	0/0:6,0:6:6.02:0,6,95	1/1:2,13:15:19.74:257,20,0	1/1:2,9:11:29.99:301,30,0	1/1:3,16:19:26.60:451,27,0	0/0:2,0:2:5.69:0,6,53
chr10	62103162	.	CCT	C	2636.30	PASS	AB=0.921;AC=40;AF=0.714;AN=56;BaseQRankSum=2.793;DP=434;FS=6.248;HRun=0;HaplotypeScore=75.6410;InbreedingCoeff=0.4493;MQ=73.65;MQ0=6;MQRankSum=-2.452;QD=8.45;ReadPosRankSum=5.909;VQSLOD=2.1305;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,12:14:12.03:155,12,0	0/1:8,1:9:26.63:27,0,39	0/0:59,0:23:21.86:0,22,309	0/0:46,0:19:12.24:0,12,215	0/1:4,6:10:3.97:75,0,4	1/1:21,0:21:32.28:227,32,0	1/1:13,0:13:11.75:79,12,0	0/1:13,0:12:10.64:11,0,115	0/0:10,0:10:8.84:0,9,105	1/1:14,0:14:28.17:169,28,0	1/1:15,0:15:24.27:176,24,0	1/1:10,0:10:11.62:78,12,0	1/1:20,0:20:17.21:195,17,0	1/1:11,0:11:14.62:101,15,0	1/1:19,0:19:24.90:202,25,0	1/1:14,0:14:22.41:157,22,0	0/1:12,0:12:16.29:16,0,99	1/1:13,0:13:14.74:102,15,0	1/1:19,0:19:28.27:261,28,0	1/1:14,0:14:27.72:150,28,0	1/1:6,0:6:5.97:45,6,0	0/1:10,0:10:12.20:12,0,67	0/1:10,0:10:2.85:3,0,87	0/0:5,0:5:5.51:0,6,59	1/1:15,0:15:23.38:155,23,0	1/1:11,0:11:27.51:151,28,0	1/1:19,0:19:38.81:265,39,0	0/0:2,0:2:5.68:0,6,38
chr10	62103971	.	A	AT	6349.08	PASS	AB=1.000;AC=44;AF=0.786;AN=56;BaseQRankSum=2.523;DP=428;FS=0.000;HRun=8;HaplotypeScore=57.9052;InbreedingCoeff=0.6830;MQ=69.66;MQ0=0;MQRankSum=-2.817;QD=16.41;ReadPosRankSum=3.404;VQSLOD=4.6972;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,20:20:51.15:588,51,0	1/1:1,8:9:21.06:242,21,0	0/0:8,0:7:10.56:0,11,86	0/0:8,0:8:14.13:0,14,135	1/1:2,30:32:87.26:1004,87,0	1/1:22,0:22:10.33:236,10,0	1/1:11,0:11:0.94:83,1,0	1/1:8,26:33:84.12:899,84,0	1/1:5,8:13:26.95:291,27,0	1/1:30,0:30:73.50:347,74,0	1/1:17,0:17:43.08:225,43,0	1/1:6,0:6:11.58:68,12,0	1/1:16,0:16:31.72:168,32,0	1/1:16,0:16:40.33:217,40,0	1/1:11,0:11:25.63:125,26,0	0/1:9,0:9:6.69:54,0,7	1/1:1,11:12:30.09:346,30,0	1/1:15,0:15:40.78:240,41,0	1/1:24,0:24:40.40:216,40,0	1/1:15,0:15:43.64:254,44,0	1/1:9,0:9:2.65:100,3,0	0/0:6,0:6:9:0,9,82	0/0:14,0:14:33.90:0,34,304	0/0:5,0:5:9:0,9,82	0/1:9,0:9:10.48:44,0,10	1/1:22,0:22:28.18:241,28,0	1/1:21,1:21:22.45:225,22,0	1/1:13,0:13:25.90:136,26,0
chr10	62103979	.	T	TA	9418.63	PASS	AB=0.979;AC=42;AF=0.750;AN=56;BaseQRankSum=-3.328;DP=423;FS=13.569;HRun=2;HaplotypeScore=42.7335;InbreedingCoeff=0.5700;MQ=65.38;MQ0=2;MQRankSum=1.871;QD=24.03;ReadPosRankSum=4.972;VQSLOD=3.0860;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:22:1.74:125,0,2	1/1:7,0:7:18.42:71,18,0	0/0:6,0:5:4.68:0,5,104	0/0:6,0:6:15.02:0,15,164	1/1:34,0:34:5.51:194,6,0	1/1:2,21:23:54.18:746,54,0	1/1:3,7:10:21.07:289,21,0	0/1:34,0:32:93.33:93,0,106	0/1:10,1:11:17.95:77,0,18	1/1:1,30:31:87.23:1134,87,0	1/1:0,18:18:45.15:622,45,0	1/1:1,6:7:12.04:166,12,0	1/1:1,16:17:33.11:456,33,0	1/1:0,17:17:45.08:598,45,0	1/1:0,13:13:27.09:374,27,0	1/1:1,7:8:15.05:208,15,0	0/1:12,0:12:14.43:69,0,14	1/1:1,17:18:26.33:561,26,0	1/1:2,16:19:49.36:627,49,0	1/1:1,17:18:51.10:663,51,0	1/1:2,8:9:24.08:332,24,0	0/0:3,0:3:9.03:0,9,111	0/0:12,0:12:33.99:0,34,409	0/0:4,0:4:11.97:0,12,128	1/1:1,6:7:12.04:166,12,0	1/1:2,22:24:66.16:843,66,0	1/1:3,19:21:48.07:630,48,0	1/1:0,10:10:27.09:374,27,0
chr10	62104238	.	TTG	T	20590.45	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=1.767;DP=659;FS=0.788;HRun=0;HaplotypeScore=88.4289;InbreedingCoeff=0.9866;MQ=88.92;MQ0=2;MQRankSum=-6.357;QD=38.56;ReadPosRankSum=4.377;VQSLOD=7.0997;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,40:42:99:1548,108,0	1/1:0,6:6:18.06:258,18,0	0/0:32,0:32:87.30:0,87,1565	0/0:16,0:16:39.13:0,39,699	1/1:0,26:26:72.08:940,72,0	1/1:0,21:21:63.21:903,63,0	1/1:0,21:21:57.19:817,57,0	1/1:1,31:32:93.28:1276,93,0	0/0:27,0:27:81.26:0,81,1450	1/1:2,24:26:72.23:1011,72,0	1/1:3,14:17:39.13:559,39,0	1/1:1,20:21:57.19:817,57,0	1/1:1,19:19:48.16:688,48,0	1/1:1,27:28:75.25:1074,75,0	1/1:0,25:25:60.20:860,60,0	1/1:0,21:21:60.20:860,60,0	1/1:1,33:34:93.31:1333,93,0	1/1:0,31:31:87.29:1247,87,0	1/1:3,24:26:69.23:983,69,0	1/1:1,29:30:87.22:1201,87,0	1/1:0,27:27:75.21:1052,75,0	0/0:14,0:14:39.13:0,39,705	0/0:20,0:20:54.19:0,54,990	0/0:16,0:15:48.14:0,48,838	1/1:0,24:24:66.22:946,66,0	1/1:0,23:23:69.17:931,69,0	1/1:1,28:29:81.10:1161,81,0	1/1:0,3:3:9.03:129,9,0
chr10	62105357	.	A	ATT	10524.80	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-3.786;DP=570;FS=58.693;HRun=10;HaplotypeScore=72.5388;InbreedingCoeff=0.9405;MQ=62.06;MQ0=9;MQRankSum=-2.147;QD=22.88;ReadPosRankSum=0.850;VQSLOD=-0.5211;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,33:34:75.16:1067,75,0	1/1:1,0:7:14.97:53,15,0	0/0:25,0:15:29.53:0,30,249	0/0:19,0:11:13.24:0,13,135	1/1:4,13:19:35.52:451,36,0	1/1:4,20:26:60.16:838,60,0	1/1:5,17:24:38.62:546,39,0	1/1:6,0:31:63.37:248,63,0	1/1:5,0:14:27.20:101,27,0	1/1:9,15:25:41.85:567,42,0	1/1:6,11:18:36.07:483,36,0	1/1:5,11:17:17.42:232,17,0	1/1:2,10:13:29.59:412,30,0	1/1:0,13:13:24.08:358,24,0	1/1:2,14:17:36.07:495,36,0	1/1:4,14:20:44.59:611,45,0	1/1:6,1:35:73.38:305,73,0	1/1:5,13:16:39.04:528,39,0	1/1:10,18:28:2.19:721,2,0	1/1:2,10:12:24.08:357,24,0	1/1:3,8:11:24.07:341,24,0	0/0:15,0:15:32.75:0,33,316	0/0:24,0:24:60.10:0,60,605	0/0:27,0:26:60.07:0,60,610	1/1:2,11:14:29.59:411,30,0	1/1:3,12:19:47.10:589,47,0	1/1:6,20:27:41.11:546,41,0	1/1:1,5:7:18.06:264,18,0
chr10	62105513	.	T	TG	4132.13	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=-8.383;DP=373;FS=18.464;HRun=8;HaplotypeScore=49.7502;InbreedingCoeff=0.8611;MQ=67.29;MQ0=0;MQRankSum=5.663;QD=23.75;ReadPosRankSum=0.390;VQSLOD=2.1092;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,15:18:45.13:517,45,0	1/1:0,7:7:21.06:242,21,0	0/0:12,0:9:4.32:0,4,66	0/1:10,0:8:30.66:31,0,53	1/1:3,17:19:17.61:440,18,0	0/0:13,0:13:39.02:0,39,356	0/0:17,0:17:41.95:0,42,369	1/1:6,20:27:14.23:639,14,0	1/1:3,20:24:48.01:533,48,0	0/0:17,0:17:45.02:0,45,411	0/0:10,0:10:30.02:0,30,274	0/0:5,0:5:12.01:0,12,110	0/0:3,0:3:6:0,6,55	0/0:10,0:10:23.99:0,24,214	0/0:8,0:7:21.01:0,21,192	0/0:7,0:7:18.01:0,18,165	1/1:6,24:30:60.18:692,60,0	0/0:8,0:8:18.01:0,18,165	0/0:11,0:11:33.01:0,33,297	0/0:19,0:19:53.97:0,54,484	0/0:9,0:9:18:0,18,165	1/1:1,8:9:24.07:277,24,0	1/1:1,12:13:30.09:346,30,0	1/1:1,15:16:36.11:415,36,0	0/0:11,0:11:27.01:0,27,247	0/0:12,0:12:30:0,30,271	0/0:24,0:24:68.93:0,69,613	0/0:3,0:3:8.96:0,9,74
chr10	62106489	.	T	TGGG	6035.83	PASS	AB=0.667;AC=39;AF=0.722;AN=54;BaseQRankSum=-4.949;DP=379;FS=13.767;HRun=3;HaplotypeScore=59.4437;InbreedingCoeff=0.7915;MQ=37.10;MQ0=71;MQRankSum=-2.673;QD=22.78;ReadPosRankSum=0.896;VQSLOD=0.7894;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:16,11:22:33.07:480,33,0	0/0:6,0:5:11.11:0,11,51	./.	0/0:12,0:5:0:0,0,1	1/1:6,11:17:36.12:575,36,0	1/1:7,7:11:14.51:185,15,0	1/1:8,8:10:21.07:369,21,0	0/0:25,0:23:57.72:0,58,329	1/1:8,4:9:14.27:193,14,0	1/1:3,8:9:21.07:392,21,0	1/1:7,7:12:23.95:319,24,0	1/1:7,10:12:25.90:422,26,0	0/1:7,6:10:2.08:203,0,2	1/1:5,10:15:26.12:541,26,0	1/1:3,8:11:18.01:247,18,0	1/1:6,3:7:8.43:232,8,0	0/0:21,0:16:30.55:0,31,170	1/1:9,3:4:6.02:114,6,0	1/1:8,8:11:29.99:474,30,0	1/1:3,4:6:9.03:144,9,0	1/1:2,3:3:9.03:156,9,0	0/0:16,0:16:30.10:0,30,425	0/0:7,0:6:12.04:0,12,163	0/0:18,0:14:21.02:0,21,283	1/1:2,6:8:9.03:142,9,0	1/1:2,9:9:27.09:489,27,0	1/1:8,5:13:19.32:318,19,0	1/1:7,0:2:3.01:39,3,0
chr10	62109005	.	G	GA	9893.94	PASS	AB=0.587;AC=44;AF=0.786;AN=56;BaseQRankSum=-10.436;DP=493;FS=5.463;HRun=9;HaplotypeScore=51.5866;InbreedingCoeff=0.8003;MQ=80.39;MQ0=0;MQRankSum=-4.871;QD=23.61;ReadPosRankSum=1.884;VQSLOD=5.7811;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,27:33:32.01:790,32,0	1/1:2,5:7:15.03:158,15,0	0/0:20,0:18:44.74:0,45,356	0/0:19,0:19:38.20:0,38,303	1/1:2,19:21:50.88:482,51,0	1/1:4,13:17:36.10:397,36,0	1/1:1,13:14:33.09:364,33,0	1/1:1,36:38:99:1121,111,0	1/1:1,14:15:39.11:430,39,0	1/1:0,13:13:39.09:422,39,0	0/1:5,12:17:35.38:279,0,35	1/1:1,12:13:24.06:265,24,0	1/1:6,13:19:33.09:364,33,0	1/1:2,18:20:48.13:525,48,0	1/1:1,15:17:32.92:345,33,0	0/1:3,7:10:1.98:208,0,2	1/1:6,16:22:6.48:392,6,0	1/1:4,13:17:33.09:364,33,0	1/1:5,16:21:48.06:492,48,0	1/1:4,12:16:39.02:403,39,0	1/1:5,18:23:25.09:504,25,0	0/0:7,0:7:20.99:0,21,182	0/0:8,0:8:23.66:0,24,189	0/0:17,0:20:46.99:0,47,387	1/1:1,6:7:18.05:199,18,0	1/1:6,19:25:51.14:562,51,0	1/1:2,17:19:39.11:430,39,0	1/1:0,15:15:36.10:397,36,0
chr10	62109747	.	TTTC	T	259.79	PASS	AB=0.931;AC=14;AF=0.250;AN=56;BaseQRankSum=8.527;DP=415;FS=28.248;HRun=0;HaplotypeScore=84.2775;InbreedingCoeff=-0.1735;MQ=51.84;MQ0=9;MQRankSum=-6.312;QD=1.44;ReadPosRankSum=7.736;VQSLOD=-0.4609;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:21:17.93:46,18,0	0/1:6,0:6:5.99:6,0,42	0/1:23,0:5:10.24:10,0,61	0/0:35,0:9:14.93:0,15,126	0/0:23,0:23:3.63:0,4,213	0/0:11,0:11:9.32:0,9,120	0/1:10,0:10:6.91:7,0,63	0/1:16,2:17:61.27:65,0,61	0/0:12,1:13:5.01:0,5,173	0/0:9,1:10:20.03:0,20,154	0/0:23,0:23:16.82:0,17,263	0/0:9,0:8:7.40:0,7,70	0/0:10,0:10:16.23:0,16,108	0/0:15,0:14:24.68:0,25,171	0/1:7,1:8:18.58:19,0,79	0/1:10,1:10:42.06:42,0,61	0/1:16,2:18:55.35:55,0,85	0/1:13,1:14:68.47:68,0,85	0/0:12,0:11:23.38:0,23,167	0/1:11,1:12:32.11:32,0,78	0/1:11,0:11:32.22:32,0,75	0/0:6,0:6:15.02:0,15,194	0/0:22,0:22:36.19:0,36,331	0/0:12,0:12:15.01:0,15,179	0/0:21,0:21:12.80:0,13,150	0/1:20,1:20:4.91:5,0,286	0/0:13,0:13:1.57:0,2,80	0/1:4,2:6:24.48:24,0,43
chr10	62111423	.	GTTTT	G	5384.35	PASS	AB=0.733;AC=45;AF=0.833;AN=54;BaseQRankSum=0.214;DP=417;FS=6.642;HRun=18;HaplotypeScore=97.3425;InbreedingCoeff=0.4653;MQ=71.34;MQ0=8;MQRankSum=-3.212;QD=15.30;ReadPosRankSum=3.082;VQSLOD=1.6022;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,0:15:23.69:184,24,0	1/1:0,2:3:7.26:76,7,0	0/1:48,0:19:42.13:42,0,122	0/0:46,0:19:3.38:0,3,98	1/1:9,2:23:29.14:249,29,0	1/1:1,11:12:24.05:292,24,0	1/1:3,5:8:11.83:143,12,0	1/1:13,10:24:32.08:372,32,0	1/1:3,4:7:8.79:109,9,0	1/1:8,5:14:24.71:275,25,0	1/1:8,15:25:44.26:511,44,0	1/1:6,4:9:11.77:146,12,0	1/1:4,11:15:23.82:324,24,0	1/1:5,5:10:11.61:146,12,0	0/1:2,5:8:5.11:97,0,5	1/1:2,3:6:10.21:113,10,0	1/1:4,8:12:23.86:292,24,0	0/1:8,7:15:17.70:165,0,18	1/1:7,1:8:2.48:36,2,0	1/1:5,13:19:38.73:442,39,0	1/1:4,2:7:7.15:76,7,0	0/0:6,0:9:21.07:0,21,383	0/0:5,0:8:18.02:0,18,286	./.	1/1:3,7:11:23.58:278,24,0	1/1:8,7:16:23.50:263,23,0	1/1:5,14:20:32.78:402,33,0	1/1:3,9:13:29.97:351,30,0
chr10	62112278	.	GTT	G	3457.04	PASS	AB=0.783;AC=34;AF=0.607;AN=56;BaseQRankSum=-7.264;DP=546;FS=0.418;HRun=16;HaplotypeScore=82.0050;InbreedingCoeff=0.6383;MQ=69.08;MQ0=3;MQRankSum=0.942;QD=9.79;ReadPosRankSum=3.650;VQSLOD=2.0886;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:41:48.88:0,49,288	0/0:1,0:3:4.74:0,5,17	0/0:20,0:10:17.56:0,18,135	0/1:22,0:16:6.54:7,0,116	0/0:10,1:21:3.66:0,4,186	1/1:4,8:14:23.34:174,23,0	1/1:7,11:21:24.50:221,24,0	0/1:23,3:34:16.27:16,0,258	0/0:11,0:26:35.43:0,35,299	1/1:5,13:19:17.67:190,18,0	1/1:3,11:15:23.77:242,24,0	1/1:3,12:16:31.94:259,32,0	1/1:6,6:13:17.11:150,17,0	1/1:4,11:17:32.32:248,32,0	1/1:3,11:15:14.13:111,14,0	1/1:4,17:22:38.80:368,39,0	0/0:11,2:25:17.73:0,18,141	1/1:5,14:18:14.46:232,14,0	0/1:14,2:17:36.41:49,0,36	0/1:5,7:12:32.25:123,0,32	1/1:13,4:17:13.98:120,14,0	0/0:11,0:18:41.91:0,42,381	0/0:9,0:12:33:0,33,353	0/0:5,0:26:44.37:0,44,421	1/1:5,8:14:14.78:166,15,0	1/1:10,14:28:55.70:413,56,0	1/1:7,13:20:17.29:192,17,0	1/1:3,9:13:4.85:179,5,0
chr10	62112303	.	CT	C	728.58	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=1.499;DP=567;FS=6.080;HRun=7;HaplotypeScore=80.1656;InbreedingCoeff=0.8653;MQ=60.64;MQ0=5;MQRankSum=-5.433;QD=14.01;ReadPosRankSum=0.730;VQSLOD=3.3457;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:60.19:0,60,753	1/1:2,3:4:6.01:61,6,0	0/0:15,0:6:3.01:0,3,38	0/0:14,1:8:5.50:0,5,70	0/0:24,0:24:48.14:0,48,590	0/0:14,0:13:33.11:0,33,414	0/0:21,0:21:37.73:0,38,390	1/1:11,15:26:51.05:505,51,0	0/0:23,0:23:44.98:0,45,468	0/0:21,0:21:42.12:0,42,507	0/0:20,0:20:46.66:0,47,524	0/0:17,0:17:28.98:0,29,346	0/0:18,0:18:38.96:0,39,441	0/0:17,0:17:48.09:0,48,536	0/0:17,0:17:36.11:0,36,452	0/0:25,0:24:63.18:0,63,765	1/1:9,12:20:31.99:296,32,0	0/0:24,0:23:54.16:0,54,665	0/0:23,0:21:54:0,54,653	0/0:19,0:18:42.60:0,43,490	0/0:18,0:17:30.10:0,30,377	0/0:18,0:18:41.74:0,42,467	0/0:14,0:14:28.64:0,29,342	0/0:29,0:29:51.12:0,51,605	0/0:17,0:17:42.56:0,43,511	0/0:25,0:25:49.01:0,49,571	0/0:22,0:22:53.58:0,54,605	0/0:17,0:17:39.12:0,39,491
chr10	62113227	.	G	GA	1379.95	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-8.268;DP=594;FS=1.156;HRun=9;HaplotypeScore=56.8465;InbreedingCoeff=0.9767;MQ=66.50;MQ0=0;MQRankSum=-2.095;QD=21.56;ReadPosRankSum=-2.662;VQSLOD=3.3424;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:68.98:0,69,599	1/1:1,11:12:21.04:232,21,0	0/0:12,0:12:29.56:0,30,234	0/0:7,0:6:9.08:0,9,87	0/0:32,0:32:83.97:0,84,727	0/0:33,1:34:68.78:0,69,823	0/0:12,0:12:32.98:0,33,282	1/1:8,16:25:50.97:545,51,0	0/0:25,0:25:62.95:0,63,538	0/0:28,0:28:79.99:0,80,680	0/0:33,0:34:89:0,89,761	0/0:19,0:19:44.96:0,45,391	0/0:17,0:17:41.98:0,42,364	0/0:25,0:26:76.98:0,77,647	0/0:18,0:18:50.97:0,51,439	0/0:22,0:22:56.98:0,57,495	1/1:0,26:27:69.02:745,69,0	0/0:11,0:11:26.99:0,27,234	0/0:19,0:19:56.95:0,57,484	0/0:31,0:32:75.59:0,76,735	0/0:11,0:11:29.99:0,30,260	0/0:24,0:24:65.94:0,66,566	0/0:33,0:33:89.20:0,89,762	0/0:13,0:13:35.98:0,36,309	0/0:18,0:18:50.98:0,51,440	0/0:19,0:19:47.99:0,48,417	0/0:27,0:26:65.96:0,66,569	0/0:11,0:11:23.98:0,24,208
chr10	62114796	.	G	GA	4515.91	PASS	AB=0.656;AC=41;AF=0.732;AN=56;BaseQRankSum=-3.445;DP=371;FS=11.775;HRun=13;HaplotypeScore=48.6268;InbreedingCoeff=0.2438;MQ=72.12;MQ0=3;MQRankSum=0.246;QD=13.77;ReadPosRankSum=-0.132;VQSLOD=4.2004;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:7,12:19:11.16:184,0,11	1/1:0,2:2:6.01:56,6,0	0/1:14,0:8:5.51:6,0,15	0/0:12,0:11:0.23:0,0,54	1/1:4,7:12:0.25:125,0,0	1/1:3,11:14:27.03:250,27,0	1/1:4,6:11:20.86:182,21,0	1/1:9,16:26:33.06:409,33,0	0/1:1,3:5:8.73:59,0,9	1/1:7,10:16:27.03:250,27,0	0/1:4,6:10:19.53:97,0,20	0/1:1,5:6:5.56:96,0,6	1/1:5,7:12:6.24:180,6,0	1/1:2,6:8:15.02:139,15,0	1/1:4,13:17:9.63:231,10,0	1/1:3,9:12:9.45:228,9,0	1/1:7,17:24:23.97:344,24,0	0/1:5,12:17:16.84:135,0,17	1/1:6,9:15:7.30:197,7,0	1/1:3,12:16:32.87:293,33,0	0/1:2,2:4:14.58:22,0,15	0/0:5,0:5:11.88:0,12,82	0/0:18,0:18:34.68:0,35,232	0/0:8,0:8:17.84:0,18,123	1/1:3,10:13:19.27:170,19,0	1/1:4,10:16:29:276,29,0	1/1:6,18:25:35.99:440,36,0	1/1:3,7:10:0.44:147,0,0
chr10	62115043	.	C	CAAA	5834.22	PASS	AB=0.604;AC=45;AF=0.804;AN=56;BaseQRankSum=-3.166;DP=524;FS=0.802;HRun=14;HaplotypeScore=103.8502;InbreedingCoeff=0.3936;MQ=76.78;MQ0=0;MQRankSum=-3.544;QD=12.36;ReadPosRankSum=-0.415;VQSLOD=2.8842;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:9,0:37:31.80:38,0,32	1/1:3,0:10:10.46:39,10,0	0/0:22,0:16:19.41:0,19,159	0/0:12,0:12:3.80:0,4,45	0/1:12,0:30:32.01:90,0,32	1/1:2,2:14:18.02:234,18,0	1/1:4,8:14:17.99:250,18,0	0/1:12,0:21:5.74:82,0,6	0/0:3,0:17:24.48:0,24,143	1/1:4,9:17:35.91:416,36,0	1/1:4,11:19:35.89:412,36,0	1/1:7,8:16:20.97:287,21,0	1/1:11,7:21:23.97:269,24,0	1/1:6,0:17:17.02:166,17,0	1/1:8,12:25:22.49:246,22,0	1/1:8,8:18:25.73:323,26,0	0/1:6,0:26:16.81:26,0,17	1/1:1,6:10:16.52:174,17,0	1/1:9,7:23:43.49:435,43,0	1/1:8,3:21:29.95:316,30,0	1/1:0,4:5:12.02:179,12,0	1/1:1,0:14:15.42:46,15,0	1/1:4,0:20:2.70:52,3,0	0/1:3,0:14:5.46:5,0,20	1/1:5,9:17:24.77:315,25,0	1/1:8,2:25:48.02:581,48,0	1/1:7,15:27:33.04:446,33,0	1/1:2,8:11:24.08:408,24,0
chr10	62118549	.	TTTTATGTATTTATTTATTTATTTATTTA	T	7151.96	PASS	AB=0.719;AC=39;AF=0.750;AN=52;BaseQRankSum=4.716;DP=224;FS=16.067;HRun=0;HaplotypeScore=118.6789;InbreedingCoeff=0.2045;MQ=73.33;MQ0=2;MQRankSum=-2.951;QD=36.12;ReadPosRankSum=2.019;VQSLOD=2.8230;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:6,0:5:21.61:100,0,22	1/1:2,0:2:3:27,3,0	0/0:9,0:8:7.31:0,7,115	0/0:6,0:4:5.58:0,6,53	0/1:1,0:7:42.93:43,0,72	1/1:0,11:11:12.04:890,12,0	./.	0/1:17,0:17:99:157,0,351	1/1:0,0:3:3.01:122,3,0	1/1:0,3:3:9.02:302,9,0	1/1:2,0:2:6.01:56,6,0	1/1:0,3:3:3.01:223,3,0	1/1:0,9:9:9.03:570,9,0	1/1:0,4:4:3.01:223,3,0	1/1:0,7:7:9.03:667,9,0	1/1:7,0:7:9.02:244,9,0	0/1:2,0:17:8.33:8,0,46	0/1:1,10:11:19.65:436,0,20	1/1:1,23:23:69.08:1611,69,0	1/1:0,11:11:14.90:304,15,0	1/1:3,0:3:2.97:20,3,0	./.	0/0:4,0:4:8.98:0,9,72	0/0:6,0:6:11.99:0,12,284	1/1:1,8:9:3.01:223,3,0	1/1:0,8:8:20.99:482,21,0	1/1:1,10:11:3.01:223,3,0	1/1:0,23:23:3.01:222,3,0
chr10	62118551	.	TTATG	T	1858.27	PASS	AB=1.000;AC=45;AF=0.865;AN=52;BaseQRankSum=4.625;DP=214;FS=8.469;HRun=0;HaplotypeScore=68.8513;InbreedingCoeff=0.3503;MQ=74.10;MQ0=2;MQRankSum=-2.594;QD=9.43;ReadPosRankSum=2.743;VQSLOD=0.9470;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,0:5:11.94:93,12,0	1/1:1,0:1:3:27,3,0	0/0:8,0:7:7.31:0,7,115	0/1:6,0:4:0.17:0,0,18	1/1:6,0:6:11.87:80,12,0	1/1:11,0:11:12.04:138,12,0	./.	1/1:1,15:16:44.96:388,45,0	1/1:3,0:3:3.01:35,3,0	1/1:3,0:3:6.01:61,6,0	1/1:2,0:2:6.01:56,6,0	1/1:3,0:3:3.01:35,3,0	1/1:9,0:9:6.02:69,6,0	1/1:4,0:4:3.01:35,3,0	1/1:7,0:6:9.03:103,9,0	1/1:6,0:6:9.01:84,9,0	1/1:17,0:17:5.81:34,6,0	1/1:11,0:11:1.57:62,2,0	1/1:24,0:23:41.88:369,42,0	1/1:11,0:11:14.89:116,15,0	1/1:2,0:2:2.97:20,3,0	./.	0/0:4,0:4:8.98:0,9,72	0/0:4,0:4:0.16:0,0,61	1/1:8,0:8:3.01:35,3,0	1/1:8,0:8:8.94:74,9,0	1/1:10,0:10:3.01:35,3,0	1/1:23,0:23:3.01:34,3,0
chr10	62119017	.	C	CT	830.30	PASS	AB=0.917;AC=13;AF=0.232;AN=56;BaseQRankSum=0.551;DP=585;FS=0.532;HRun=15;HaplotypeScore=99.3900;InbreedingCoeff=-0.1082;MQ=72.71;MQ0=8;MQRankSum=0.085;QD=3.24;ReadPosRankSum=-1.068;VQSLOD=0.5296;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:34,1:37:12.38:164,0,12	0/1:8,0:9:10.60:58,0,11	0/0:54,0:23:17.10:0,17,108	0/1:32,0:16:0.50:1,0,27	0/1:21,0:20:35.56:131,0,36	0/0:13,0:14:27.62:0,28,151	0/0:14,0:19:20.24:0,20,151	1/1:10,11:23:27.27:275,27,0	0/0:3,0:16:20.35:0,20,59	0/0:19,0:19:20.30:0,20,125	0/0:15,0:18:4.86:0,5,114	0/0:16,0:16:17.11:0,17,151	0/1:11,1:13:5.75:6,0,73	0/0:22,0:23:34.02:0,34,203	0/0:18,2:20:2.54:0,3,112	0/0:18,1:20:6.15:0,6,141	0/1:8,26:37:18.08:236,0,18	0/1:13,1:17:18.73:19,0,102	0/0:16,1:17:7.04:0,7,150	0/1:23,1:24:53.84:54,0,92	0/0:16,1:21:3.45:0,3,103	0/0:21,2:23:8.52:0,9,142	0/0:9,1:10:1.26:0,1,115	0/0:16,2:18:15.95:0,16,207	0/1:12,0:15:0.35:0,0,96	0/1:17,0:17:17.04:17,0,87	0/0:19,1:21:14.99:0,15,195	0/1:3,1:9:12.55:13,0,34
chr10	62119032	.	T	TC	867.34	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=1.967;DP=626;FS=11.930;HRun=5;HaplotypeScore=91.2771;InbreedingCoeff=0.9391;MQ=69.05;MQ0=11;MQRankSum=1.227;QD=14.22;ReadPosRankSum=1.883;VQSLOD=2.1129;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,26:39:64.21:623,64,0	0/0:7,0:7:8.14:0,8,54	0/0:74,0:27:35.11:0,35,277	0/0:53,0:20:13.43:0,13,172	1/1:13,6:21:39.92:366,40,0	0/0:16,0:16:38.52:0,39,323	0/0:19,0:19:47.46:0,47,383	0/0:24,0:24:34.72:0,35,244	0/0:15,0:15:31.67:0,32,195	0/0:14,0:14:35.30:0,35,328	0/0:19,0:19:38.12:0,38,328	0/0:22,0:22:56.72:0,57,480	0/0:16,0:16:42.18:0,42,348	0/0:24,0:24:62.84:0,63,545	0/0:22,0:22:52.78:0,53,445	0/0:15,0:15:41.26:0,41,400	0/0:41,0:41:28.86:0,29,303	0/0:21,0:21:44.31:0,44,373	0/0:19,0:19:40.06:0,40,352	0/0:18,0:18:26.66:0,27,270	0/0:12,0:12:27.57:0,28,211	0/0:19,0:19:27.81:0,28,248	0/0:13,0:13:27.88:0,28,250	0/0:19,0:19:43.09:0,43,443	0/0:17,0:17:32.88:0,33,284	0/0:16,0:16:34.16:0,34,318	0/0:21,0:21:56.63:0,57,516	0/0:9,0:8:12.77:0,13,101
chr10	62121366	.	CT	C	14448.35	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=13.577;DP=678;FS=3.907;HRun=3;HaplotypeScore=67.5617;InbreedingCoeff=0.9917;MQ=83.13;MQ0=0;MQRankSum=-2.169;QD=34.16;ReadPosRankSum=5.033;VQSLOD=5.3664;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:63.21:0,63,906	0/0:3,0:3:9.03:0,9,130	0/0:17,0:17:48.12:0,48,618	0/0:21,0:21:57.04:0,57,723	0/0:34,0:34:99:0,102,1449	1/1:0,29:29:81.25:1004,81,0	1/1:0,23:23:48.15:595,48,0	0/0:31,0:31:84.25:0,84,1137	0/0:36,0:36:99:0,102,1434	1/1:0,21:21:63.19:763,63,0	1/1:0,28:28:84.26:1038,84,0	1/1:0,27:27:78.25:967,78,0	1/1:0,25:25:66.21:816,66,0	1/1:0,25:25:66.21:818,66,0	1/1:0,28:28:81.25:1004,81,0	1/1:0,24:24:69.22:855,69,0	0/0:25,0:25:72.22:0,72,1016	1/1:0,20:20:54.17:669,54,0	1/1:1,17:18:51.15:618,51,0	1/1:0,36:36:99:1290,105,0	1/1:1,27:28:72.23:892,72,0	0/0:23,0:23:66.20:0,66,915	0/0:21,0:21:57.17:0,57,791	0/0:23,0:23:66.21:0,66,932	1/1:0,21:21:45.14:558,45,0	1/1:0,25:25:75.24:929,75,0	1/1:0,25:25:72.23:889,72,0	1/1:0,20:20:60.19:743,60,0
chr10	62122812	.	G	GA	1637.64	PASS	AB=1.000;AC=35;AF=0.625;AN=56;BaseQRankSum=-6.100;DP=315;FS=5.348;HRun=1;HaplotypeScore=64.4128;InbreedingCoeff=0.0627;MQ=59.97;MQ0=10;MQRankSum=4.653;QD=6.80;ReadPosRankSum=-0.275;VQSLOD=0.4119;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:20,0:19:7.19:52,0,7	1/1:1,0:1:3.01:46,3,0	0/0:33,0:8:5.85:0,6,148	0/0:24,0:7:1.92:0,2,52	0/1:11,0:11:1.65:33,0,2	0/1:19,0:19:6.05:57,0,6	1/1:14,1:14:11.60:86,12,0	1/1:8,3:12:13.17:162,13,0	1/1:7,2:8:20.97:236,21,0	1/1:10,0:10:2.59:34,3,0	1/1:10,0:8:4.25:39,4,0	0/1:7,0:7:5.63:28,0,6	0/1:4,0:4:5.40:19,0,5	1/1:3,0:2:2.68:11,3,0	0/1:10,0:10:12.85:13,0,20	0/1:4,0:4:6.81:19,0,7	1/1:20,6:25:38.85:561,39,0	1/1:10,0:10:2.97:41,3,0	0/1:9,0:8:3.74:32,0,4	1/1:6,0:6:3.05:26,3,0	0/1:12,0:11:8.89:29,0,9	0/0:3,0:3:3.01:0,3,41	0/0:4,0:4:9:0,9,97	0/0:9,0:8:20.63:0,21,236	0/1:9,0:9:0.69:61,0,1	1/1:14,0:14:3.51:104,4,0	1/1:8,0:8:5.60:78,6,0	0/1:10,0:10:6.18:20,0,6
chr10	62123133	.	CTTT	C	5107.43	PASS	AB=0.727;AC=41;AF=0.732;AN=56;BaseQRankSum=-6.988;DP=486;FS=3.785;HRun=17;HaplotypeScore=85.4333;InbreedingCoeff=0.6656;MQ=71.22;MQ0=8;MQRankSum=-1.054;QD=13.30;ReadPosRankSum=3.132;VQSLOD=2.6793;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:18,20:43:17.68:469,18,0	1/1:0,4:4:5.92:61,6,0	0/0:29,1:14:0.60:0,1,190	0/0:21,0:11:14.05:0,14,94	0/1:9,1:12:0.77:28,0,1	1/1:7,8:15:13.31:150,13,0	1/1:10,12:23:31.04:316,31,0	1/1:17,14:30:33.55:315,34,0	0/0:10,0:16:21.12:0,21,123	1/1:5,9:14:22.69:232,23,0	0/1:4,2:7:9.03:9,0,26	1/1:7,6:13:14.74:148,15,0	1/1:7,5:10:20.91:198,21,0	1/1:6,4:12:19.60:197,20,0	1/1:8,8:17:23.85:232,24,0	1/1:4,8:12:11.95:124,12,0	1/1:12,20:33:32.96:330,33,0	0/1:8,7:15:9.06:295,0,9	1/1:5,10:15:26.46:262,26,0	1/1:5,10:14:26.61:246,27,0	1/1:11,5:15:15.89:175,16,0	0/0:1,0:3:5.96:0,6,43	0/0:5,0:6:14.89:0,15,110	0/0:16,0:24:40.54:0,41,327	1/1:5,3:8:12:113,12,0	1/1:11,13:24:40.73:357,41,0	1/1:3,16:21:37.10:399,37,0	1/1:8,12:21:17.50:453,18,0
chr10	62123606	.	TACCAC	T	762.36	PASS	AB=0.869;AC=13;AF=0.232;AN=56;BaseQRankSum=8.320;DP=953;FS=0.509;HRun=0;HaplotypeScore=217.6211;InbreedingCoeff=-0.2960;MQ=57.21;MQ0=13;MQRankSum=-4.346;QD=1.76;ReadPosRankSum=-8.141;VQSLOD=0.1359;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:54:99:0,132,3811	0/0:6,0:6:9.03:0,9,210	0/0:55,0:16:17.44:0,17,425	0/0:69,0:38:73.79:0,74,1473	0/0:22,0:22:45.15:0,45,1285	0/0:36,1:37:20.94:0,21,2186	0/0:32,0:32:72.12:0,72,1803	0/0:35,0:34:81.66:0,82,1930	0/0:25,0:25:57.17:0,57,1682	0/1:32,7:37:99:135,0,1729	0/0:18,1:19:28.72:0,29,840	0/1:35,4:37:31.38:31,0,1651	0/1:30,5:35:21.88:22,0,1202	0/0:20,4:23:48.16:0,48,1279	0/1:24,16:37:66.59:67,0,1178	0/1:23,5:28:83.86:84,0,1266	0/0:41,0:41:99:0,100,2819	0/1:19,1:20:78.37:78,0,1185	0/1:27,1:24:5.95:6,0,1410	0/1:22,3:24:8.98:9,0,1413	0/1:72,10:77:52.90:53,0,3214	0/0:24,0:24:63.22:0,63,1803	0/0:12,0:12:27.09:0,27,771	0/0:61,0:60:99:0,136,3969	0/1:23,1:24:15.54:16,0,1127	0/1:30,10:39:99:295,0,1638	0/1:13,6:17:83.89:84,0,859	0/1:13,2:15:34.24:34,0,707
chr10	62123654	.	AC	A	4427.33	PASS	AB=0.767;AC=17;AF=0.304;AN=56;BaseQRankSum=9.168;DP=928;FS=9.904;HRun=2;HaplotypeScore=146.0778;InbreedingCoeff=-0.4438;MQ=56.61;MQ0=9;MQRankSum=-4.408;QD=7.78;ReadPosRankSum=-1.373;VQSLOD=0.9854;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,1:45:92.96:0,93,1798	0/0:2,0:2:6.02:0,6,90	0/0:44,0:21:19.15:0,19,613	0/0:53,4:23:62.94:0,63,842	0/0:22,0:22:54.18:0,54,808	0/1:16,13:29:99:459,0,377	0/1:24,6:29:99:146,0,941	0/0:43,0:41:99:0,108,1728	0/0:29,1:30:79.28:0,79,1191	0/1:32,10:38:99:311,0,940	0/1:8,5:13:99:118,0,199	0/1:24,16:38:99:527,0,632	0/1:28,13:42:99:411,0,900	0/1:19,5:23:99:132,0,633	0/1:42,11:50:99:236,0,1183	0/1:16,9:25:99:250,0,531	0/0:37,0:37:99:0,102,1512	0/1:23,10:33:99:261,0,761	0/1:18,6:24:99:165,0,650	0/1:16,5:20:99:179,0,460	0/1:87,25:106:99:372,0,2245	0/0:18,0:18:45.14:0,45,654	0/0:10,0:9:30.10:0,30,448	0/0:50,1:51:99:0,140,2094	0/1:8,6:12:71.17:71,0,284	0/1:20,10:30:99:318,0,523	0/1:16,7:21:99:243,0,437	0/1:8,6:14:99:228,0,252
chr10	62125013	.	A	AC	29628.06	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-15.214;DP=843;FS=10.712;HRun=0;HaplotypeScore=70.6065;InbreedingCoeff=0.9990;MQ=87.31;MQ0=0;MQRankSum=-8.440;QD=43.13;ReadPosRankSum=5.890;VQSLOD=4.4880;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,48:49:99:2109,132,0	1/1:0,9:9:21.07:335,21,0	0/0:33,0:32:96.20:0,96,1236	0/0:41,0:41:99:0,116,1454	1/1:0,37:37:99:1666,105,0	1/1:0,24:24:69.23:1091,69,0	1/1:0,18:18:48.16:765,48,0	1/1:2,39:41:99:1794,117,0	1/1:1,40:41:99:1630,102,0	1/1:0,33:33:99:1575,99,0	1/1:1,20:21:54.18:863,54,0	1/1:1,30:31:78.27:1246,78,0	1/1:0,33:33:93.32:1485,93,0	1/1:0,32:33:93.32:1473,93,0	1/1:0,39:39:99:1724,108,0	1/1:1,34:35:99:1582,99,0	1/1:0,30:30:72.25:1150,72,0	1/1:0,17:17:42.14:671,42,0	1/1:2,19:21:57.15:838,57,0	1/1:1,27:28:75.25:1187,75,0	1/1:0,31:31:84.29:1342,84,0	0/0:26,0:26:78.26:0,78,1088	0/0:31,0:31:90.30:0,90,1258	0/0:25,0:25:75.21:0,75,1026	1/1:0,29:29:69.24:1101,69,0	1/1:0,34:34:99:1606,102,0	1/1:0,26:26:72.25:1150,72,0	1/1:0,27:27:77.92:1246,78,0
chr10	62125489	.	T	TCCC	9482.39	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=10.672;DP=340;FS=11.608;HRun=2;HaplotypeScore=204.9605;InbreedingCoeff=0.8960;MQ=68.76;MQ0=6;MQRankSum=-11.501;QD=39.68;ReadPosRankSum=2.032;VQSLOD=2.8421;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:21:44.17:785,44,0	1/1:5,0:5:12:156,12,0	0/0:18,0:14:41.78:0,42,584	0/0:18,0:10:25.23:0,25,387	1/1:12,1:13:18.06:303,18,0	1/1:14,0:14:34.68:557,35,0	1/1:7,0:6:17.93:273,18,0	1/1:12,0:12:27.09:439,27,0	1/1:11,0:11:30.10:503,30,0	1/1:8,0:8:21.07:350,21,0	1/1:9,0:9:24.08:389,24,0	1/1:12,0:12:24.08:416,24,0	1/1:11,0:11:30.10:504,30,0	1/1:10,0:10:30.07:491,30,0	1/1:13,0:13:39.13:667,39,0	1/1:16,0:16:45.05:734,45,0	1/1:5,0:5:12.45:134,12,0	1/1:5,0:5:9.03:156,9,0	1/1:9,0:9:26.45:398,26,0	1/1:14,0:14:36.12:596,36,0	1/1:6,0:6:2.49:6,2,0	0/0:27,0:27:69.23:0,69,1153	0/0:28,0:28:84.25:0,84,1373	0/0:10,0:10:30.10:0,30,502	1/1:12,0:12:24.04:387,24,0	1/1:8,3:11:33.11:563,33,0	1/1:14,0:14:36.12:623,36,0	1/1:1,0:1:3.01:52,3,0
chr10	62125491	.	C	CCCA	928.92	PASS	AC=28;AF=0.737;AN=38;BaseQRankSum=-0.709;DP=125;FS=69.395;HRun=0;HaplotypeScore=31.2351;InbreedingCoeff=0.5209;MQ=104.87;MQ0=7;MQRankSum=-3.044;QD=42.22;ReadPosRankSum=-3.780;VQSLOD=0.9626;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,0:1:3.01:49,3,0	1/1:2,0:2:3.01:68,3,0	0/0:18,0:14:41.53:0,42,618	0/0:18,0:10:29.44:0,29,417	1/1:1,1:2:3.01:73,3,0	1/1:1,0:1:3.01:72,3,0	1/1:1,1:1:3.01:73,3,0	1/1:2,0:2:3.01:53,3,0	./.	./.	1/1:1,1:2:6.02:116,6,0	1/1:1,0:1:3.01:52,3,0	1/1:0,2:2:3.01:74,3,0	./.	./.	1/1:0,1:1:3.01:70,3,0	./.	./.	./.	1/1:0,2:2:6.02:108,6,0	./.	0/0:25,0:25:69.23:0,69,1283	0/0:28,0:28:84.29:0,84,1541	0/0:11,0:11:30.10:0,30,559	1/1:1,0:1:3.01:52,3,0	1/1:2,0:2:6.02:134,6,0	1/1:1,0:1:3.01:73,3,0	./.
chr10	62126260	.	C	CA	5155.88	PASS	AB=0.781;AC=19;AF=0.339;AN=56;BaseQRankSum=-7.024;DP=1220;FS=0.000;HRun=0;HaplotypeScore=162.3023;InbreedingCoeff=-0.5076;MQ=56.80;MQ0=34;MQRankSum=-0.049;QD=5.10;ReadPosRankSum=-0.641;VQSLOD=4.5638;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:64,10:63:25.62:26,0,1474	0/1:13,1:13:99:112,0,199	0/0:36,0:8:20.28:0,20,235	0/0:28,0:13:29.28:0,29,367	0/0:23,0:22:37.88:0,38,469	0/1:19,17:32:4.60:5,0,519	0/1:58,3:60:77.99:78,0,1684	0/0:46,0:45:99:0,123,1678	0/1:26,9:30:99:143,0,710	0/0:24,2:24:33.02:0,33,759	0/0:21,1:21:46.91:0,47,610	0/1:43,26:56:99:466,0,1369	0/1:37,7:42:99:148,0,859	0/1:32,30:51:99:354,0,914	0/1:41,18:55:99:443,0,1349	0/1:47,18:58:99:319,0,1557	0/1:56,32:79:99:750,0,1831	0/1:46,39:77:99:1049,0,1469	0/1:23,8:25:74.21:74,0,748	0/1:13,4:15:16.79:17,0,315	0/1:98,27:105:99:406,0,2454	0/0:5,0:5:9.03:0,9,123	0/0:9,0:9:18.02:0,18,251	0/0:14,0:14:27.05:0,27,355	0/1:23,11:32:24.53:25,0,644	0/1:35,4:38:46.37:46,0,1125	0/1:29,21:42:99:351,0,727	0/1:6,16:21:99:344,0,152
chr10	62126771	.	TGTGTGTGTGTGTGTGTGCGTGC	T	12884.85	PASS	AB=1.000;AC=36;AF=0.720;AN=50;BaseQRankSum=9.951;DP=539;FS=6.424;HRun=0;HaplotypeScore=255.6924;InbreedingCoeff=0.4568;MQ=45.60;MQ0=9;MQRankSum=-5.210;QD=33.47;ReadPosRankSum=2.477;VQSLOD=2.8198;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:1,33:34:21.07:1203,21,0	0/1:7,0:6:11.35:49,0,11	0/0:9,0:3:8.06:0,8,164	0/0:16,0:3:3.01:0,3,54	./.	1/1:2,12:14:9.03:546,9,0	1/1:2,26:28:6.02:364,6,0	0/1:26,0:26:95.66:96,0,169	0/1:21,0:21:3.93:477,0,4	1/1:1,14:15:34.54:1107,35,0	./.	1/1:1,17:18:11.48:725,11,0	1/1:2,16:18:21.07:1105,21,0	1/1:0,17:17:9.03:546,9,0	1/1:0,21:21:12.04:728,12,0	1/1:1,19:20:15.05:911,15,0	0/1:17,0:15:22.16:107,0,22	1/1:3,17:20:8.24:257,8,0	1/1:5,18:23:47.43:867,47,0	1/1:1,13:14:3.01:61,3,0	./.	0/0:10,0:10:27.08:0,27,1440	0/0:9,0:9:21.54:0,22,1063	0/0:44,0:42:93.75:0,94,6572	1/1:1,13:14:9.03:529,9,0	1/1:5,31:35:67.81:2027,68,0	1/1:3,17:20:18.06:1071,18,0	1/1:2,0:2:3.01:109,3,0
chr10	62126775	.	TGTGTGTGTGTGTGCGTGC	T	10760.83	PASS	AB=1.000;AC=39;AF=0.780;AN=50;BaseQRankSum=7.595;DP=531;FS=2.078;HRun=0;HaplotypeScore=232.3944;InbreedingCoeff=0.6954;MQ=44.42;MQ0=9;MQRankSum=-5.279;QD=28.70;ReadPosRankSum=0.068;VQSLOD=3.4083;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:33,0:33:21.07:849,21,0	1/1:7,0:6:11.95:170,12,0	0/0:11,0:3:6.91:0,7,118	0/0:19,0:3:3.01:0,3,35	./.	1/1:13,0:13:9.03:395,9,0	1/1:27,0:27:6.02:263,6,0	1/1:26,0:26:68.61:798,69,0	1/1:5,16:21:18.06:882,18,0	1/1:15,0:15:21.07:766,21,0	./.	1/1:17,0:17:11.66:523,12,0	1/1:17,0:17:21.07:777,21,0	1/1:17,0:17:9.03:395,9,0	1/1:21,0:21:12.04:527,12,0	1/1:19,0:19:15.05:659,15,0	1/1:17,0:15:26.32:428,26,0	0/1:20,0:20:4.69:162,0,5	1/1:21,0:21:27.94:530,28,0	1/1:14,0:14:3.01:38,3,0	./.	0/0:9,0:9:24.06:0,24,1105	0/0:9,0:9:21.53:0,22,829	0/0:46,0:44:90.74:0,91,5200	1/1:13,0:14:9.03:394,9,0	1/1:35,0:34:59.43:1355,59,0	1/1:19,0:19:18.06:790,18,0	1/1:2,0:2:3.01:60,3,0
chr10	62130232	.	TTTG	T	579.94	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.903;DP=645;FS=1.031;HRun=0;HaplotypeScore=92.5317;InbreedingCoeff=0.9994;MQ=79.49;MQ0=0;MQRankSum=-2.538;QD=34.11;ReadPosRankSum=2.692;VQSLOD=4.3521;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:72.23:0,72,1493	0/0:17,0:17:48.16:0,48,1031	0/0:29,0:29:78.20:0,78,1457	0/0:21,0:21:54.07:0,54,1034	0/0:21,0:21:60.17:0,60,1176	0/0:22,0:22:60.21:0,60,1313	0/0:23,0:23:69.22:0,69,1436	0/0:23,0:23:60.21:0,60,1274	1/1:1,16:17:42.14:675,42,0	0/0:26,0:26:78.27:0,78,1706	0/0:18,0:18:51.17:0,51,1034	0/0:28,0:28:84.24:0,84,1666	0/0:29,0:29:78.27:0,78,1704	0/0:21,0:21:57.20:0,57,1232	0/0:27,0:27:75.24:0,75,1594	0/0:28,0:28:72.23:0,72,1537	0/0:20,0:20:57.20:0,57,1224	0/0:25,0:25:66.23:0,66,1427	0/0:17,0:17:42.14:0,42,919	0/0:15,0:15:42.14:0,42,908	0/0:20,0:20:51.11:0,51,1004	0/0:22,0:22:60.21:0,60,1286	0/0:32,0:32:90.29:0,90,1908	0/0:37,0:37:99:0,105,2189	0/0:19,0:19:54.18:0,54,1184	0/0:28,0:28:78.27:0,78,1636	0/0:23,0:23:66.20:0,66,1378	0/0:10,0:10:30.10:0,30,610
chr10	62130339	.	TTGTGTGTG	T	1549.52	PASS	AB=0.884;AC=23;AF=0.523;AN=44;BaseQRankSum=-0.019;DP=622;FS=22.197;HRun=0;HaplotypeScore=144.7895;InbreedingCoeff=0.4682;MQ=55.13;MQ0=27;MQRankSum=-3.556;QD=5.27;ReadPosRankSum=1.073;VQSLOD=1.0493;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:36.09:0,36,572	./.	./.	./.	0/0:13,0:17:12.02:0,12,238	1/1:16,5:22:6:81,6,0	1/1:27,0:26:8.97:158,9,0	./.	0/0:20,0:20:12.17:0,12,106	./.	0/0:14,0:14:0.47:0,0,1	1/1:26,5:31:9.03:222,9,0	1/1:12,5:17:9.03:147,9,0	0/0:10,0:16:6:0,6,57	0/1:12,2:15:6.61:50,0,7	0/1:14,3:18:48.60:263,0,49	1/1:17,3:19:5.64:127,6,0	1/1:21,5:25:8.74:221,9,0	0/0:17,0:14:0.89:0,1,2	1/1:20,4:24:2.82:25,3,0	0/1:42,0:39:50.90:51,0,69	0/0:14,0:18:14.78:0,15,276	0/0:9,0:13:14.93:0,15,242	0/0:27,0:42:53.67:0,54,1042	./.	1/1:25,0:24:0.83:32,1,0	1/1:15,0:14:9.03:195,9,0	1/1:9,2:11:6.02:130,6,0
chr10	62131107	.	GA	G	322.37	PASS	AB=0.917;AC=3;AF=0.054;AN=56;BaseQRankSum=4.959;DP=581;FS=0.762;HRun=10;HaplotypeScore=56.4435;InbreedingCoeff=0.6248;MQ=66.80;MQ0=4;MQRankSum=1.166;QD=11.12;ReadPosRankSum=0.914;VQSLOD=2.7320;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,117,1283	0/0:10,0:10:21.06:0,21,232	0/0:15,0:9:14.29:0,14,187	0/0:20,0:13:27.71:0,28,297	0/0:24,0:24:50.96:0,51,603	0/0:20,0:20:57.12:0,57,612	0/0:24,0:24:66.16:0,66,721	0/0:41,0:39:99:0,99,1090	1/1:1,17:18:47.99:417,48,0	0/0:18,0:18:36.08:0,36,388	0/0:16,1:16:14.21:0,14,340	0/0:22,0:22:48.09:0,48,506	0/0:17,0:17:39.09:0,39,417	0/0:11,0:11:24.94:0,25,258	0/0:21,0:21:54.15:0,54,597	0/0:27,4:31:6.05:0,6,736	0/0:16,0:16:36.10:0,36,398	0/0:27,0:27:66.16:0,66,719	0/0:27,0:27:66.08:0,66,687	0/0:22,0:22:54.15:0,54,596	0/1:10,1:11:1.99:2,0,208	0/0:15,0:15:36.10:0,36,397	0/0:20,0:20:48.13:0,48,531	0/0:21,0:21:54.15:0,54,597	0/0:15,1:16:6.87:0,7,287	0/0:20,0:20:54.15:0,54,597	0/0:25,0:25:69.17:0,69,754	0/0:8,0:8:15.04:0,15,164
chr10	62131458	.	TGTGTGTG	T	4910.48	PASS	AB=0.778;AC=45;AF=0.804;AN=56;BaseQRankSum=2.539;DP=479;FS=5.438;HRun=0;HaplotypeScore=59.1018;InbreedingCoeff=0.4191;MQ=55.10;MQ0=44;MQRankSum=0.919;QD=14.88;ReadPosRankSum=-0.873;VQSLOD=2.8073;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,16:16:6.02:141,6,0	1/1:5,0:5:3.22:71,3,0	0/0:51,0:7:17.23:0,17,308	0/0:64,0:15:22.64:0,23,552	1/1:5,14:19:27.33:486,27,0	1/1:9,0:7:12.98:148,13,0	1/1:1,9:9:3.01:70,3,0	0/1:5,0:9:10.37:51,0,10	1/1:8,0:7:18.05:217,18,0	1/1:2,8:10:25.60:452,26,0	1/1:2,6:7:8.66:277,9,0	1/1:5,9:12:3.01:71,3,0	1/1:1,12:12:3.01:74,3,0	1/1:3,7:10:6.49:143,6,0	1/1:3,14:15:9.92:214,10,0	1/1:2,14:14:5.70:145,6,0	1/1:36,0:34:64.08:561,64,0	1/1:7,0:23:6.46:118,6,0	1/1:9,4:10:12.08:121,12,0	1/1:3,7:10:16.30:352,16,0	0/1:6,6:10:76.50:132,0,76	0/0:17,0:11:23.87:0,24,627	0/1:13,0:10:4.57:5,0,296	0/0:17,0:12:1.98:0,2,581	1/1:3,10:12:6.02:132,6,0	1/1:3,11:14:25.51:484,26,0	1/1:1,7:8:6.49:146,6,0	1/1:16,0:14:10.21:298,10,0
chr10	62131689	.	GTTT	G	1969.26	PASS	AB=0.966;AC=22;AF=0.393;AN=56;BaseQRankSum=1.356;DP=397;FS=32.146;HRun=8;HaplotypeScore=109.2745;InbreedingCoeff=-0.3491;MQ=66.27;MQ0=7;MQRankSum=-0.101;QD=6.98;ReadPosRankSum=3.728;VQSLOD=-0.5471;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:15,15:30:8.33:142,0,8	0/0:3,0:3:7:0,7,32	0/0:21,0:13:30.05:0,30,433	0/0:13,0:10:15.81:0,16,152	1/1:20,0:20:17.68:203,18,0	0/1:22,1:23:54.90:340,0,55	0/1:13,0:13:32.02:251,0,32	0/0:14,0:13:18.36:0,18,133	0/0:10,0:10:15.98:0,16,191	0/1:13,1:14:54.63:133,0,55	0/1:8,0:8:59.31:122,0,59	0/1:11,0:11:11.01:63,0,11	0/1:6,0:6:43.70:87,0,44	0/1:8,0:7:9.94:60,0,10	0/1:8,0:8:71.85:73,0,72	0/1:8,0:8:3.72:4,0,92	0/1:23,0:23:5.87:6,0,79	0/1:18,0:17:72.65:73,0,277	0/1:17,0:14:60.57:150,0,61	1/1:7,0:7:0.90:89,1,0	0/1:8,0:7:18.18:18,0,33	0/0:9,0:9:27.08:0,27,544	0/0:14,0:14:37.37:0,37,745	0/0:30,0:31:84.29:0,84,1724	0/1:19,0:19:79.37:79,0,215	0/1:19,0:18:39.49:105,0,39	0/1:12,1:13:63.13:107,0,63	0/1:8,1:8:25.79:26,0,96
chr10	62131697	.	TG	T	3205.03	PASS	AB=0.947;AC=47;AF=0.839;AN=56;BaseQRankSum=9.691;DP=382;FS=5.290;HRun=1;HaplotypeScore=96.0516;InbreedingCoeff=0.7385;MQ=56.88;MQ0=11;MQRankSum=-7.144;QD=10.51;ReadPosRankSum=-2.807;VQSLOD=0.6386;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:31,2:33:49.18:342,49,0	1/1:3,0:3:6.40:46,6,0	0/0:21,1:11:5.79:0,6,150	0/1:17,1:10:16.08:16,0,73	1/1:20,2:20:35.74:250,36,0	1/1:18,1:19:44.87:249,45,0	1/1:13,1:14:38.20:239,38,0	1/1:11,0:10:9.52:79,10,0	1/1:10,0:9:17.54:112,18,0	1/1:10,0:10:29.67:208,30,0	1/1:8,0:8:19.01:118,19,0	1/1:6,1:7:18.86:119,19,0	1/1:3,1:4:9.77:62,10,0	1/1:10,1:7:14.64:90,15,0	1/1:7,0:7:12.71:75,13,0	1/1:5,0:5:8.61:31,9,0	1/1:18,1:19:37.31:272,37,0	1/1:18,2:18:39.38:247,39,0	1/1:15,0:11:25.44:125,25,0	1/1:7,1:8:19.21:123,19,0	1/1:4,0:3:5.03:32,5,0	0/0:10,0:10:30.07:0,30,338	0/0:15,0:15:39.35:0,39,418	0/0:30,0:30:64.78:0,65,939	1/1:14,0:14:23.21:118,23,0	1/1:17,0:16:37.90:206,38,0	1/1:16,0:15:25.81:121,26,0	1/1:10,0:9:15.99:90,16,0
chr10	62131705	.	TG	T	3178.94	PASS	AB=0.933;AC=42;AF=0.750;AN=56;BaseQRankSum=8.518;DP=396;FS=10.727;HRun=1;HaplotypeScore=101.9525;InbreedingCoeff=0.5791;MQ=54.57;MQ0=11;MQRankSum=-6.604;QD=11.00;ReadPosRankSum=-2.482;VQSLOD=0.2596;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:34,2:36:69.09:496,69,0	1/1:3,0:3:8.89:65,9,0	0/0:25,1:14:6.84:0,7,188	0/0:20,2:11:11.83:0,12,153	1/1:20,2:20:41.79:317,42,0	1/1:14,1:15:25.96:152,26,0	1/1:9,0:9:21.51:143,22,0	1/1:11,0:10:12:111,12,0	1/1:8,0:7:11.16:63,11,0	1/1:12,0:12:26.71:218,27,0	1/1:6,0:6:11.26:48,11,0	1/1:8,0:8:17.74:124,18,0	1/1:3,0:3:6.38:39,6,0	1/1:10,0:6:9.34:59,9,0	0/1:5,2:7:2.86:59,0,3	0/1:6,0:6:15.65:23,0,16	1/1:25,1:26:62.92:494,63,0	0/1:20,1:18:2.84:128,0,3	1/1:19,0:14:37.45:224,37,0	1/1:8,0:8:13.59:86,14,0	1/1:5,0:4:4.28:20,4,0	0/0:10,0:10:30.08:0,30,356	0/0:18,0:18:45.28:0,45,463	0/0:31,0:31:87.78:0,88,1009	0/1:12,0:12:11.59:33,0,12	1/1:15,0:14:30.98:188,31,0	1/1:15,1:15:23.68:141,24,0	1/1:10,1:10:20.88:125,21,0
chr10	62131721	.	TGA	T	1244.25	PASS	AB=0.832;AC=18;AF=0.321;AN=56;BaseQRankSum=11.344;DP=385;FS=74.399;HRun=0;HaplotypeScore=102.8838;InbreedingCoeff=-0.4717;MQ=59.09;MQ0=8;MQRankSum=-9.908;QD=5.34;ReadPosRankSum=1.132;VQSLOD=-0.3620;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:18,4:22:76.47:76,0,448	0/1:4,1:5:21.95:22,0,154	0/0:27,1:16:39.82:0,40,574	0/0:31,0:17:27.08:0,27,430	0/1:15,6:19:99:145,0,361	0/1:13,4:17:99:181,0,244	0/1:9,2:11:70.72:71,0,261	0/0:13,0:12:34.36:0,34,508	0/0:8,1:8:8.24:0,8,179	0/1:8,1:9:92.13:100,0,92	0/1:5,3:8:86.49:86,0,139	0/1:4,1:5:41.65:42,0,86	0/0:5,0:5:6.37:0,6,156	0/1:6,3:5:0.37:0,0,116	0/0:7,0:7:8.24:0,8,216	0/1:8,1:9:17.68:18,0,155	0/1:20,2:22:25.78:26,0,617	0/1:16,3:16:62.95:63,0,275	0/1:8,6:12:99:220,0,140	0/1:6,5:11:99:134,0,115	0/0:6,0:6:17.73:0,18,256	0/0:13,0:13:39.13:0,39,664	0/0:14,0:14:34.99:0,35,588	0/0:25,0:25:75.20:0,75,1248	0/1:13,1:14:18.53:19,0,331	0/1:10,1:10:61.67:62,0,211	0/1:13,2:14:81.92:82,0,196	0/1:9,2:11:54.81:55,0,224
chr10	62134179	.	G	GGT	952.01	PASS	AB=0.952;AC=24;AF=0.429;AN=56;BaseQRankSum=-7.116;DP=744;FS=8.639;HRun=0;HaplotypeScore=220.3975;InbreedingCoeff=0.0710;MQ=64.53;MQ0=13;MQRankSum=4.001;QD=2.29;ReadPosRankSum=-1.939;VQSLOD=0.6297;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:29,1:30:8.38:194,8,0	1/1:5,0:6:11.70:79,12,0	0/0:48,0:25:3.01:0,3,34	0/0:55,0:31:6.01:0,6,58	0/1:16,3:19:10.68:61,0,11	0/0:27,0:27:14.08:0,14,66	1/1:27,0:25:6.46:56,6,0	0/1:34,0:35:15.68:68,0,16	0/1:28,0:28:62.95:109,0,63	0/0:25,0:24:1.70:0,2,12	1/1:17,0:17:2.60:10,3,0	0/0:27,0:27:17.04:0,17,83	0/1:23,0:23:14.11:14,0,81	0/1:23,0:23:16.63:17,0,44	0/0:37,0:36:17.04:0,17,83	0/0:40,0:39:1.67:0,2,120	1/1:29,0:31:14.58:161,15,0	0/0:15,0:15:1.70:0,2,12	0/0:18,0:18:5.68:0,6,28	0/1:31,0:32:0.62:1,0,30	0/0:30,0:29:2.74:0,3,12	1/1:15,14:28:1.14:42,1,0	0/1:8,8:17:7.55:38,0,8	1/1:21,1:22:16.04:141,16,0	0/1:19,0:19:32.77:33,0,35	0/1:30,0:30:19.34:83,0,19	0/1:24,0:24:7.64:8,0,18	0/0:7,0:7:0.94:0,1,2
chr10	62134188	.	GTGTGTGTGTGTGTGTGTGTGTCTGTGTGTGTGTC	G	12289.57	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=6.578;DP=758;FS=25.251;HRun=0;HaplotypeScore=456.7387;InbreedingCoeff=0.2839;MQ=56.25;MQ0=18;MQRankSum=-5.122;QD=29.12;ReadPosRankSum=7.062;VQSLOD=1.4315;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:43.83:0,44,4088	0/0:9,0:9:15.05:0,15,1091	0/0:44,0:22:29.75:0,30,333	0/0:45,0:22:24.07:0,24,337	0/0:17,0:17:11.30:0,11,1106	1/1:26,2:28:19.87:1152,20,0	0/1:23,0:21:47.08:100,0,47	0/0:49,0:47:94.86:0,95,3548	0/0:29,0:29:53.39:0,53,4434	0/1:21,0:20:99:211,0,372	0/1:19,0:19:17.94:161,0,18	1/1:26,0:26:18.06:1160,18,0	1/1:23,1:24:7.56:1119,8,0	0/1:26,0:26:23.32:1032,0,23	1/1:38,0:37:17.53:1198,18,0	1/1:40,1:40:36.32:2343,36,0	0/0:35,0:33:41.57:0,42,2199	0/1:20,0:20:98.24:191,0,98	0/1:20,0:19:99:427,0,100	1/1:30,1:31:12.04:809,12,0	0/1:32,0:30:45.49:70,0,45	0/0:28,0:27:14.52:0,15,626	0/0:21,0:18:18.02:0,18,805	0/0:22,0:22:30.06:0,30,2519	0/1:17,0:17:9.92:1009,0,10	0/1:32,0:32:99:911,0,131	1/1:24,0:24:4.42:397,4,0	0/0:5,0:5:8.22:0,8,43
chr10	62134190	.	GTGTGTGTGTGTGTGTGTGTCTGTGTGTGTGTC	G	15763.85	PASS	AB=0.770;AC=28;AF=0.500;AN=56;BaseQRankSum=6.196;DP=756;FS=15.235;HRun=0;HaplotypeScore=419.3268;InbreedingCoeff=0.5038;MQ=54.21;MQ0=19;MQRankSum=-4.347;QD=36.75;ReadPosRankSum=6.953;VQSLOD=1.0104;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:40.56:0,41,3792	0/0:9,0:9:15.05:0,15,994	0/0:44,0:21:14.03:0,14,222	0/0:43,0:19:17.40:0,17,169	0/0:17,0:17:11.13:0,11,973	0/1:7,21:28:13.02:1173,0,13	0/1:23,0:21:44.89:108,0,45	0/0:50,0:48:99:0,100,3681	0/0:29,0:29:46.93:0,47,4048	0/1:20,1:19:99:536,0,236	0/1:2,17:19:17.95:209,0,18	1/1:4,23:27:18.06:1424,18,0	1/1:5,19:24:4.70:1234,5,0	1/1:4,22:26:17.46:1257,17,0	1/1:1,36:37:17.50:1484,18,0	1/1:7,34:40:36.43:2749,36,0	0/0:36,0:34:35.19:0,35,1946	0/1:5,16:21:65.04:238,0,65	1/1:4,15:18:38.52:730,39,0	1/1:5,25:30:12.04:917,12,0	0/1:33,0:31:14.84:47,0,15	0/0:27,0:26:17.61:0,18,595	0/0:20,0:17:15.01:0,15,684	0/0:22,0:22:30.53:0,31,2356	1/1:12,5:17:5.23:1434,5,0	1/1:4,30:34:77.38:1610,77,0	1/1:2,22:24:8.37:522,8,0	1/1:5,0:5:8.96:93,9,0
chr10	62134198	.	G	GTC	471.23	PASS	AB=0.989;AC=18;AF=0.321;AN=56;BaseQRankSum=-0.642;DP=713;FS=3.064;HRun=0;HaplotypeScore=211.5301;InbreedingCoeff=-0.3003;MQ=48.48;MQ0=19;MQRankSum=0.784;QD=1.14;ReadPosRankSum=0.931;VQSLOD=2.3513;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:30:22.39:22,0,252	1/1:11,0:11:8.18:28,8,0	0/0:31,0:12:29.75:0,30,272	0/0:36,0:12:23.55:0,24,279	0/1:17,0:17:23.61:24,0,53	0/1:26,0:26:15.31:15,0,28	0/1:19,1:19:47.90:81,0,48	0/0:47,0:44:99:0,116,770	0/0:29,0:29:42.06:0,42,346	0/1:18,0:16:11.51:12,0,163	0/1:19,0:19:13.14:13,0,18	0/0:24,0:24:17.28:0,17,90	0/1:22,1:23:30.36:30,0,80	0/1:26,0:26:38.58:39,0,85	0/0:37,0:36:17.25:0,17,89	0/1:37,1:37:25.68:26,0,118	0/1:32,0:30:71.72:81,0,72	0/0:20,0:20:14.68:0,15,90	0/0:16,0:15:26.39:0,26,162	0/1:27,0:27:10.75:11,0,23	0/1:30,0:28:54.07:54,0,63	0/1:28,0:27:3.38:3,0,88	0/1:20,0:17:1.36:1,0,118	0/0:31,0:31:22.41:0,22,310	0/1:15,0:15:49.35:49,0,70	0/1:32,2:34:99:139,0,189	0/0:22,0:22:5.69:0,6,25	0/0:3,0:3:8.03:0,8,42
chr10	62134208	.	GTC	G	2165.06	PASS	AB=0.978;AC=43;AF=0.768;AN=56;BaseQRankSum=6.411;DP=679;FS=0.000;HRun=0;HaplotypeScore=201.8077;InbreedingCoeff=-0.1617;MQ=47.88;MQ0=21;MQRankSum=-2.492;QD=3.27;ReadPosRankSum=4.799;VQSLOD=2.0299;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:30,1:31:97.24:97,0,216	0/1:11,1:12:7.20:51,0,7	0/0:16,0:5:5.76:0,6,45	0/1:40,0:10:13.62:14,0,44	0/1:15,2:17:9.61:116,0,10	1/1:24,0:24:14.35:78,14,0	1/1:16,0:14:8.10:60,8,0	0/1:49,0:46:91.69:92,0,350	1/1:4,25:29:29.72:402,30,0	1/1:12,0:10:16.11:121,16,0	1/1:17,0:17:3.01:31,3,0	1/1:24,0:24:17.04:85,17,0	1/1:23,0:23:2.11:68,2,0	1/1:23,0:23:16.80:82,17,0	1/1:36,0:35:17.04:84,17,0	1/1:37,1:37:33.23:162,33,0	0/1:32,0:30:17.15:47,0,17	0/1:20,0:20:21.34:21,0,22	0/1:18,0:17:16.41:16,0,28	1/1:27,0:27:11.53:75,12,0	1/1:20,0:19:3.07:43,3,0	0/1:28,0:27:8.67:9,0,60	0/1:21,0:18:22.90:23,0,59	0/1:34,1:35:33.60:34,0,336	1/1:14,0:14:26.35:187,26,0	1/1:32,0:32:38.03:238,38,0	1/1:22,0:22:8.23:45,8,0	1/1:3,0:3:5.91:38,6,0
chr10	62134214	.	G	GTGTC	2001.13	PASS	AB=1.000;AC=6;AF=0.107;AN=56;BaseQRankSum=-4.567;DP=672;FS=5.293;HRun=0;HaplotypeScore=225.3011;InbreedingCoeff=0.4542;MQ=49.41;MQ0=23;MQRankSum=-0.192;QD=15.63;ReadPosRankSum=-0.003;VQSLOD=2.8562;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:22.62:0,23,563	1/1:2,9:11:11.54:196,12,0	0/0:19,0:7:14.94:0,15,150	0/0:37,0:10:8.84:0,9,154	0/0:17,0:17:10.28:0,10,141	0/0:24,0:24:17.75:0,18,150	0/0:8,0:7:9.08:0,9,66	0/1:52,0:48:40.64:1259,0,41	0/1:30,0:31:40.04:79,0,40	0/0:11,0:9:18.66:0,19,121	0/0:17,0:17:1.25:0,1,3	0/0:24,0:24:18.02:0,18,168	0/0:21,0:21:15.02:0,15,140	0/0:22,0:22:14.81:0,15,129	0/0:36,0:35:17.89:0,18,168	0/0:37,0:36:33.04:0,33,309	1/1:10,23:32:9.28:592,9,0	0/0:19,0:19:11.79:0,12,81	0/0:18,0:17:22.87:0,23,160	0/0:27,0:27:10.26:0,10,87	0/0:21,0:20:16.81:0,17,134	0/0:25,0:24:8.61:0,9,169	0/0:23,0:20:22.66:0,23,263	0/0:36,0:36:57.36:0,57,917	0/0:15,0:15:26.30:0,26,179	0/0:31,0:31:22.95:0,23,179	0/0:22,0:22:5.75:0,6,50	0/0:2,0:2:2.49:0,2,7
chr10	62134222	.	CTG	C	474.15	PASS	AB=0.948;AC=25;AF=0.446;AN=56;BaseQRankSum=11.333;DP=687;FS=3.414;HRun=0;HaplotypeScore=205.1128;InbreedingCoeff=0.4106;MQ=52.64;MQ0=18;MQRankSum=-8.460;QD=1.32;ReadPosRankSum=8.542;VQSLOD=1.5720;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:46.59:0,47,784	0/1:10,0:10:7.95:8,0,90	0/0:25,0:11:20.90:0,21,378	0/0:38,0:16:11.85:0,12,407	0/1:8,11:19:20.41:31,0,20	0/1:25,0:25:7.95:49,0,8	0/0:13,0:12:3.91:0,4,22	0/0:49,0:45:99:0,114,1202	0/0:31,0:31:50.18:0,50,513	0/0:12,0:11:3.72:0,4,82	0/1:17,0:17:0:0,0,0	1/1:24,0:24:16.79:80,17,0	1/1:20,0:20:13.99:67,14,0	1/1:22,0:22:13.94:66,14,0	1/1:36,0:35:16.79:80,17,0	1/1:37,0:36:10.42:123,10,0	0/0:36,0:34:30.93:0,31,402	1/1:17,0:17:2.80:13,3,0	0/1:17,0:16:13.63:14,0,37	1/1:27,0:27:8.24:39,8,0	1/1:22,0:22:2.31:9,2,0	0/0:27,0:26:24.53:0,25,363	0/0:19,0:17:29.89:0,30,428	0/0:39,0:39:72.12:0,72,1162	0/1:13,0:13:33.68:34,0,59	0/1:32,0:32:23.24:23,0,57	1/1:22,0:22:5.21:26,5,0	0/0:2,0:2:5.92:0,6,39
chr10	62134839	.	AGTGGCGACCTG	A	1617.63	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.697;DP=814;FS=0.000;HRun=0;HaplotypeScore=262.9513;InbreedingCoeff=0.9381;MQ=84.32;MQ0=0;MQRankSum=-6.987;QD=28.38;ReadPosRankSum=1.049;VQSLOD=2.3097;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,26:34:45.11:1555,45,0	0/0:7,0:7:21.07:0,21,1122	0/0:30,0:30:84.29:0,84,4008	0/0:23,0:23:54.18:0,54,2424	1/1:2,21:23:5.84:175,6,0	0/0:29,0:29:87.30:0,87,4925	0/0:30,0:30:87.30:0,87,4800	0/0:32,0:32:90.30:0,90,4345	0/0:32,0:32:96.33:0,96,4862	0/0:31,0:31:78.27:0,78,4018	0/0:32,0:32:93.30:0,93,4739	0/0:30,0:30:81.75:0,82,4360	0/0:31,0:31:87.27:0,87,4282	0/0:45,0:45:99:0,132,7065	0/0:32,0:32:93.31:0,93,4757	0/0:24,0:24:72.25:0,72,3942	0/0:27,0:27:75.24:0,75,4009	0/0:29,0:29:87.30:0,87,4519	0/0:25,0:25:69.24:0,69,3536	0/0:18,0:18:51.18:0,51,2891	0/0:64,0:64:99:0,187,10176	0/0:32,0:32:93.22:0,93,4234	0/0:9,0:9:24.08:0,24,1160	0/0:43,0:43:99:0,126,6496	0/0:24,0:24:69.24:0,69,3908	0/0:38,0:38:99:0,105,5434	0/0:28,0:28:78.27:0,78,3976	0/0:12,0:12:30.10:0,30,1584
chr10	62138413	.	G	GCTCT	1567.57	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-7.805;DP=735;FS=0.000;HRun=0;HaplotypeScore=119.3997;InbreedingCoeff=0.9938;MQ=74.43;MQ0=0;MQRankSum=-2.123;QD=60.29;ReadPosRankSum=0.795;VQSLOD=4.9646;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,126,2319	0/0:12,0:12:30.07:0,30,489	0/0:16,0:14:26.57:0,27,393	0/0:25,0:24:33.53:0,34,496	0/0:25,0:25:69.24:0,69,1262	0/0:23,0:23:66.23:0,66,1205	0/0:26,0:26:69.24:0,69,1269	0/0:31,0:31:81.28:0,81,1490	1/1:3,23:26:63.22:1662,63,0	0/0:31,0:31:87.26:0,87,1540	0/0:25,0:25:75.26:0,75,1380	0/0:44,0:44:99:0,126,2249	0/0:30,0:30:87.29:0,87,1546	0/0:32,0:32:87.27:0,87,1518	0/0:38,0:38:99:0,111,2000	0/0:42,0:42:99:0,108,1971	0/0:22,0:22:60.21:0,60,1104	0/0:19,0:19:48.16:0,48,857	0/0:16,0:16:45.15:0,45,819	0/0:28,0:28:81.26:0,81,1460	0/0:37,0:37:99:0,108,1925	0/0:27,0:27:75.26:0,75,1353	0/0:22,0:22:60.21:0,60,1096	0/0:19,0:19:48.16:0,48,873	0/0:32,0:32:96.30:0,96,1690	0/0:25,0:25:69.24:0,69,1254	0/0:12,0:12:33.11:0,33,607	0/0:7,0:7:21.07:0,21,386
chr10	62139697	.	C	CG	1849.72	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-8.326;DP=640;FS=14.790;HRun=2;HaplotypeScore=81.3993;InbreedingCoeff=0.9977;MQ=72.84;MQ0=0;MQRankSum=0.611;QD=36.27;ReadPosRankSum=-0.808;VQSLOD=2.1815;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:78.21:0,78,950	1/1:1,7:8:24.08:345,24,0	0/0:17,0:17:42.01:0,42,454	0/0:20,0:17:36.10:0,36,422	0/0:14,0:14:27.08:0,27,334	0/0:14,0:14:42.13:0,42,521	0/0:48,0:48:99:0,135,1673	1/1:4,15:19:45.12:610,45,0	0/0:24,0:24:69.20:0,69,842	0/0:15,0:14:39.12:0,39,483	0/0:10,0:10:27.08:0,27,335	0/0:32,0:32:87.26:0,87,1065	0/0:22,0:22:66.21:0,66,817	0/0:33,0:33:96.30:0,96,1186	0/0:27,0:27:78.23:0,78,953	0/0:29,0:29:87.27:0,87,1078	1/1:0,24:24:72.24:1037,72,0	0/0:16,0:16:48.12:0,48,579	0/0:26,0:26:75.23:0,75,922	0/0:19,0:19:48.14:0,48,578	0/0:39,0:39:99:0,111,1341	0/0:15,0:15:42.12:0,42,507	0/0:18,0:18:51.16:0,51,631	0/0:34,0:34:93.27:0,93,1136	0/0:23,0:23:57.18:0,57,706	0/0:39,0:39:99:0,102,1229	0/0:14,0:14:39.12:0,39,483	0/0:8,0:8:24.08:0,24,297
chr10	62139717	.	TCTCACTAGCAAGGAACAAGAACGGGGTGTGTGCACTCCAGCC	T	1722.58	PASS	AC=38;AF=0.760;AN=50;BaseQRankSum=1.180;DP=538;FS=5.484;HRun=0;HaplotypeScore=504.6833;InbreedingCoeff=0.5882;MQ=67.49;MQ0=3;MQRankSum=2.518;QD=4.84;ReadPosRankSum=5.082;VQSLOD=0.4008;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:13:4.99:17,5,0	1/1:4,0:4:3:25,3,0	0/0:27,0:12:0:0,0,0	0/0:29,0:13:6.48:0,6,20	1/1:8,0:8:0.89:2,1,0	1/1:11,0:11:9.01:102,9,0	1/1:35,0:35:6:53,6,0	0/0:24,0:22:0:0,0,0	1/1:17,0:17:9:101,9,0	./.	1/1:6,0:6:3:52,3,0	1/1:20,0:20:15.01:178,15,0	1/1:13,0:13:15.02:176,15,0	1/1:23,0:23:5.99:51,6,0	1/1:22,0:22:11.98:100,12,0	1/1:26,0:26:6.01:77,6,0	1/1:18,0:18:11.97:95,12,0	./.	1/1:26,0:25:2.94:27,3,0	1/1:10,6:16:14.87:143,15,0	1/1:33,0:32:19.09:154,19,0	0/0:15,0:15:18.05:0,18,523	0/0:18,0:18:18.03:0,18,349	0/0:35,0:35:45.15:0,45,1947	1/1:15,0:15:6:52,6,0	1/1:27,15:42:34.16:413,34,0	./.	1/1:8,0:8:3.01:50,3,0
chr10	62139739	.	CG	C	62.90	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=3.488;DP=426;FS=1.658;HRun=4;HaplotypeScore=75.0648;InbreedingCoeff=0.7918;MQ=57.41;MQ0=7;MQRankSum=-3.607;QD=8.99;ReadPosRankSum=-3.056;VQSLOD=-0.2802;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,5:5:12.03:132,12,0	0/0:5,0:4:8.20:0,8,62	0/0:24,0:4:9.02:0,9,105	0/0:24,0:8:18.03:0,18,203	1/1:0,2:2:3.01:33,3,0	0/0:12,0:12:33.03:0,33,388	0/0:17,0:17:45.15:0,45,627	0/0:17,0:16:44.74:0,45,591	0/0:19,0:18:54.09:0,54,647	0/0:8,0:6:15:0,15,184	0/0:6,0:6:12.01:0,12,133	0/0:18,0:18:50.99:0,51,571	0/0:12,0:12:33.07:0,33,423	0/0:13,0:13:39.06:0,39,474	0/0:23,0:23:68.92:0,69,699	0/0:23,0:23:62.97:0,63,675	0/0:13,0:13:32.95:0,33,409	0/0:11,0:11:23.94:0,24,217	0/0:13,0:12:30.03:0,30,356	0/0:11,0:11:27.08:0,27,347	0/0:30,0:29:76.29:0,76,888	0/0:16,0:16:45.14:0,45,610	0/0:13,0:13:30.10:0,30,420	0/0:29,0:29:75.25:0,75,1042	0/0:14,0:14:30.02:0,30,361	0/0:31,0:30:60.15:0,60,789	0/0:9,0:8:18:0,18,194	0/0:8,0:8:24.02:0,24,282
chr10	62139742	.	G	GA	55.92	PASS	AB=0.916;AC=6;AF=0.107;AN=56;BaseQRankSum=2.671;DP=419;FS=1.762;HRun=0;HaplotypeScore=75.0611;InbreedingCoeff=-0.1067;MQ=57.45;MQ0=7;MQRankSum=2.164;QD=0.81;ReadPosRankSum=-6.707;VQSLOD=0.0220;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:5:13.91:0,14,70	0/1:1,4:4:32.88:87,0,33	0/0:23,0:4:9.02:0,9,113	0/0:23,0:7:18.05:0,18,228	0/0:3,0:3:2.74:0,3,12	0/0:13,0:13:5.84:0,6,305	0/0:17,0:17:45.15:0,45,629	0/1:15,1:15:2.75:3,0,542	0/0:20,0:19:53.17:0,53,600	0/0:9,0:7:14.41:0,14,176	0/1:7,0:7:33.26:33,0,95	0/0:19,0:19:24.64:0,25,461	0/0:15,0:15:14.09:0,14,369	0/0:14,0:14:16.45:0,16,416	0/0:23,0:23:32.29:0,32,508	0/1:24,0:24:11.66:12,0,485	0/0:13,0:13:13.09:0,13,412	0/0:9,0:9:22.32:0,22,153	0/0:11,0:10:29.34:0,29,343	0/0:10,0:10:26.23:0,26,316	0/0:28,0:27:22.40:0,22,725	0/0:16,0:16:45.14:0,45,610	0/0:11,0:11:30.10:0,30,419	0/0:28,0:28:81.18:0,81,1087	0/0:12,0:12:29.17:0,29,328	0/0:28,0:27:34.14:0,34,728	0/1:9,0:8:29.28:29,0,133	0/1:8,0:8:0.24:0,0,216
chr10	62140298	.	C	CTGT	1282.56	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-6.550;DP=796;FS=0.000;HRun=0;HaplotypeScore=108.4666;InbreedingCoeff=0.9880;MQ=85.56;MQ0=1;MQRankSum=-1.872;QD=42.75;ReadPosRankSum=0.412;VQSLOD=5.0849;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,120,1956	0/0:10,0:10:24.08:0,24,392	0/0:24,0:24:57.16:0,57,899	0/0:25,0:26:72.11:0,72,1077	0/0:28,0:28:78.27:0,78,1268	0/0:28,0:28:81.28:0,81,1321	0/0:35,0:35:99:0,105,1616	0/0:43,0:43:99:0,117,1822	1/1:8,20:30:63.21:1377,63,0	0/0:23,0:23:69.23:0,69,1106	0/0:18,0:18:54.18:0,54,877	0/0:45,0:45:99:0,120,1936	0/0:28,0:28:81.26:0,81,1297	0/0:50,0:50:99:0,144,2349	0/0:34,0:34:96.33:0,96,1565	0/0:31,0:31:90.31:0,90,1468	0/0:32,0:32:81.28:0,81,1319	0/0:25,0:25:69.21:0,69,1091	0/0:12,0:12:36.11:0,36,565	0/0:23,0:23:63.20:0,63,1002	0/0:52,0:52:99:0,147,2343	0/0:21,0:21:57.19:0,57,930	0/0:9,0:9:24.07:0,24,368	0/0:44,0:44:99:0,129,2097	0/0:18,0:18:48.16:0,48,781	0/0:27,0:27:72.24:0,72,1149	0/0:30,0:30:90.31:0,90,1469	0/0:7,0:6:18.06:0,18,294
chr10	62140845	.	T	TC	1367.36	PASS	AB=0.976;AC=31;AF=0.554;AN=56;BaseQRankSum=-0.016;DP=440;FS=32.785;HRun=11;HaplotypeScore=68.1057;InbreedingCoeff=-0.1544;MQ=72.19;MQ0=0;MQRankSum=-1.802;QD=3.71;ReadPosRankSum=3.325;VQSLOD=-0.3388;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:61.83:0,62,447	0/1:9,0:9:10.01:36,0,10	0/0:13,0:12:13.69:0,14,91	0/0:7,0:6:2.63:0,3,34	0/0:10,0:10:20.90:0,21,160	0/1:15,0:15:14.41:40,0,14	0/1:29,0:29:28.06:173,0,28	0/1:28,1:29:30.43:30,0,50	0/0:15,0:17:38.91:0,39,262	0/1:12,0:12:15.49:15,0,25	0/1:16,0:16:18.90:24,0,19	0/1:16,0:16:42.45:60,0,42	0/1:16,0:16:0.45:75,0,0	1/1:21,0:21:1.55:89,2,0	0/1:24,0:24:63.58:79,0,64	1/1:12,0:12:11.58:61,12,0	1/1:19,0:19:31.52:192,32,0	0/1:11,0:11:15.85:62,0,16	0/1:11,0:12:26.82:40,0,27	0/1:15,0:15:15.46:15,0,53	1/1:13,0:13:11.32:57,11,0	1/1:2,4:6:6.01:59,6,0	1/1:6,5:12:3.01:30,3,0	0/1:8,7:16:39.74:161,0,40	1/1:21,0:21:5.47:42,5,0	0/1:18,0:18:33.13:33,0,43	0/1:18,0:18:32.14:74,0,32	1/1:9,0:9:17.10:88,17,0
chr10	62140856	.	C	CCT	3190.59	PASS	AB=0.711;AC=36;AF=0.643;AN=56;BaseQRankSum=-3.387;DP=422;FS=60.199;HRun=0;HaplotypeScore=75.4362;InbreedingCoeff=-0.0212;MQ=76.81;MQ0=0;MQRankSum=-0.838;QD=8.46;ReadPosRankSum=0.812;VQSLOD=0.8130;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:30:87.20:129,0,87	0/1:2,0:8:6.71:57,0,7	0/0:16,0:15:31.92:0,32,331	0/0:7,0:6:2.41:0,2,85	0/1:11,0:11:10.45:76,0,10	1/1:10,0:16:13.44:276,13,0	1/1:5,0:27:9.78:216,10,0	1/1:6,0:19:37.32:272,37,0	0/1:18,0:18:32.06:85,0,32	1/1:7,0:10:6.02:147,6,0	0/1:0,0:13:9.03:89,0,9	1/1:10,0:15:10.85:214,11,0	1/1:1,0:13:15.98:103,16,0	1/1:2,1:20:3.34:163,3,0	0/1:10,0:20:24.12:143,0,24	1/1:0,13:14:17.98:250,18,0	1/1:2,0:19:31.01:167,31,0	0/1:4,0:13:15.33:75,0,15	0/1:3,0:11:10.46:117,0,10	0/1:2,0:17:25.19:145,0,25	1/1:2,0:13:14.58:83,15,0	0/1:6,0:6:0.57:23,0,1	0/0:4,0:4:1.82:0,2,5	0/0:18,0:18:8.32:0,8,196	1/1:2,0:16:10.54:95,11,0	0/1:3,0:18:18.17:210,0,18	0/1:3,0:16:31.69:82,0,32	1/1:2,0:14:23.35:138,23,0
chr10	62149460	.	T	TTTTTAAC	30773.94	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-6.612;DP=448;FS=0.408;HRun=0;HaplotypeScore=90.3065;InbreedingCoeff=0.9650;MQ=64.63;MQ0=6;MQRankSum=-14.234;QD=95.28;ReadPosRankSum=-0.493;VQSLOD=5.7916;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,13:16:45.15:1769,45,0	1/1:2,5:6:16.30:631,16,0	0/0:23,0:18:54.19:0,54,1398	0/0:24,0:19:42.21:0,42,1395	1/1:6,21:31:87.23:2878,87,0	1/1:5,10:14:33.11:1351,33,0	1/1:6,10:13:39.13:1540,39,0	1/1:6,4:11:15.01:553,15,0	0/0:23,0:23:69.24:0,69,1863	1/1:2,9:11:33.11:1380,33,0	1/1:2,3:6:12.04:383,12,0	1/1:5,10:15:39.13:1576,39,0	1/1:3,15:18:51.18:2123,51,0	1/1:5,13:19:51.17:1882,51,0	1/1:3,17:20:57.20:2255,57,0	1/1:3,13:15:39.13:1630,39,0	1/1:2,7:8:18.06:753,18,0	1/1:2,8:11:24.55:991,25,0	1/1:2,7:10:30.10:1229,30,0	1/1:2,11:14:36.12:1330,36,0	1/1:4,11:13:39.13:1376,39,0	0/0:10,0:10:30.10:0,30,819	0/0:16,0:16:45.14:0,45,1153	0/0:29,0:29:87.30:0,87,2361	1/1:3,11:14:36.12:1475,36,0	1/1:2,18:19:54.18:2171,54,0	1/1:5,9:13:30.10:1246,30,0	1/1:0,2:3:6.02:251,6,0
chr10	62149621	.	T	TAA	4364.38	PASS	AB=0.860;AC=52;AF=0.929;AN=56;BaseQRankSum=-0.801;DP=545;FS=1.214;HRun=16;HaplotypeScore=94.0477;InbreedingCoeff=0.1800;MQ=65.11;MQ0=3;MQRankSum=0.003;QD=8.01;ReadPosRankSum=-1.565;VQSLOD=2.1259;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,15:28:14.02:120,14,0	1/1:1,6:7:6.39:45,6,0	0/1:24,0:13:5.74:6,0,23	0/1:13,0:8:4.88:5,0,47	1/1:12,9:26:28.52:223,29,0	1/1:3,16:20:8.94:69,9,0	1/1:13,0:13:18.03:202,18,0	1/1:14,10:25:16.04:318,16,0	1/1:9,0:9:15:152,15,0	1/1:19,4:25:41.41:423,41,0	1/1:9,2:18:29.90:282,30,0	1/1:5,3:18:14.98:142,15,0	1/1:7,1:15:4.25:31,4,0	1/1:18,0:18:12.04:142,12,0	1/1:7,0:18:5.43:17,5,0	1/1:6,0:21:11.96:105,12,0	1/1:7,16:29:23.37:197,23,0	1/1:4,1:13:8.22:55,8,0	1/1:7,4:13:21.02:231,21,0	1/1:20,0:23:49.06:435,49,0	1/1:5,8:15:6.49:75,6,0	1/1:5,0:18:7.70:37,8,0	0/1:19,0:23:37.02:91,0,37	0/1:3,0:10:0.39:0,0,26	1/1:3,1:13:17.39:151,17,0	1/1:14,6:36:59.89:580,60,0	1/1:18,11:30:3.90:25,4,0	1/1:5,2:20:21.90:207,22,0
chr10	62149894	.	ATGACT	A	21316.67	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=18.467;DP=729;FS=5.237;HRun=0;HaplotypeScore=148.5287;InbreedingCoeff=0.9993;MQ=84.83;MQ0=0;MQRankSum=-12.800;QD=49.81;ReadPosRankSum=3.625;VQSLOD=4.8331;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,156,4674	0/0:12,0:12:36.12:0,36,1126	0/0:32,0:32:87.27:0,87,2557	0/0:23,0:23:65.99:0,66,1741	0/0:21,0:21:57.20:0,57,1732	1/1:0,26:26:66.23:1406,66,0	1/1:1,25:26:60.16:1232,60,0	0/0:39,0:39:99:0,111,3312	0/0:12,0:12:36.12:0,36,1127	1/1:1,27:28:81.24:1623,81,0	1/1:0,10:9:21.03:403,21,0	1/1:2,36:38:93.32:1942,93,0	1/1:1,23:24:56.93:1167,57,0	1/1:4,27:31:81.28:1692,81,0	1/1:1,28:29:66.23:1406,66,0	1/1:1,39:40:99:2146,102,0	0/0:45,0:45:99:0,135,3998	1/1:1,15:16:36.12:767,36,0	1/1:2,15:17:45.09:845,45,0	1/1:0,16:15:39.07:785,39,0	1/1:0,36:36:81.14:1626,81,0	0/0:21,0:21:63.15:0,63,1826	0/0:15,0:15:36.12:0,36,1128	0/0:29,0:29:84.20:0,84,2314	1/1:1,16:15:33.11:702,33,0	1/1:0,25:25:72.23:1495,72,0	1/1:0,26:26:54.19:1150,54,0	1/1:0,23:23:45.15:929,45,0
chr10	62154079	.	CCT	C	12028.78	PASS	AC=44;AF=0.815;AN=54;BaseQRankSum=4.567;DP=444;FS=12.540;HRun=0;HaplotypeScore=59.5345;InbreedingCoeff=0.9299;MQ=89.28;MQ0=2;MQRankSum=-5.350;QD=32.60;ReadPosRankSum=3.278;VQSLOD=6.3787;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,28:37:78.26:1091,78,0	1/1:0,3:3:9.03:126,9,0	0/0:15,0:15:33.11:0,33,554	0/0:20,0:20:45.13:0,45,676	1/1:2,4:6:9.03:126,9,0	1/1:3,13:15:24.08:335,24,0	1/1:2,21:23:48.16:671,48,0	1/1:2,10:12:27.06:344,27,0	1/1:1,18:19:51.17:714,51,0	1/1:1,9:9:21.07:290,21,0	1/1:3,3:6:12.04:167,12,0	1/1:2,20:22:51.01:714,51,0	1/1:3,14:17:36.12:503,36,0	1/1:0,8:8:18.06:252,18,0	1/1:1,22:23:51.17:714,51,0	1/1:0,13:13:36.12:504,36,0	1/1:1,21:22:63.21:878,63,0	1/1:1,21:22:63.21:882,63,0	1/1:3,14:17:42.12:568,42,0	./.	1/1:8,52:59:99:2016,144,0	0/0:6,0:6:15.05:0,15,264	0/0:5,0:5:9.01:0,9,132	0/0:28,0:28:81.23:0,81,1422	1/1:2,9:11:24.08:336,24,0	1/1:3,10:13:30.10:419,30,0	1/1:0,6:6:18.06:251,18,0	1/1:0,3:3:9.03:126,9,0
chr10	62159749	.	T	TCC	2647.73	PASS	AB=0.907;AC=35;AF=0.625;AN=56;BaseQRankSum=-2.726;DP=467;FS=11.431;HRun=10;HaplotypeScore=75.3002;InbreedingCoeff=0.7063;MQ=72.94;MQ0=0;MQRankSum=-1.308;QD=8.57;ReadPosRankSum=-3.416;VQSLOD=-0.5199;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:37:20.23:152,20,0	0/0:8,0:8:14.98:0,15,152	0/1:8,1:10:8.44:8,0,67	0/0:14,0:13:16.46:0,16,117	1/1:5,0:13:17.36:69,17,0	1/1:7,5:12:3.01:45,3,0	1/1:2,15:20:24.57:267,25,0	0/0:20,0:20:20.92:0,21,211	0/0:2,0:25:49.40:0,49,215	1/1:4,7:12:14.51:165,15,0	0/0:2,2:5:0.45:0,0,0	1/1:9,2:23:11.01:107,11,0	1/1:3,10:13:9.03:127,9,0	1/1:10,12:22:6.02:89,6,0	1/1:5,17:22:24.07:339,24,0	0/1:10,2:13:0.99:241,0,1	0/0:24,0:24:60.09:0,60,610	1/1:3,16:23:34.56:407,35,0	1/1:6,4:10:17.05:169,17,0	0/1:2,0:2:0.46:39,0,0	1/1:36,4:43:23.77:274,24,0	0/0:17,0:17:39.02:0,39,390	0/0:8,0:8:18.04:0,18,183	0/0:35,0:37:83.54:0,84,806	1/1:5,1:8:7.32:58,7,0	1/1:5,4:9:12.01:156,12,0	1/1:6,1:15:9.01:85,9,0	1/1:0,2:2:3.01:45,3,0
chr10	62161655	.	G	GA	6506.03	PASS	AB=0.693;AC=45;AF=0.804;AN=56;BaseQRankSum=-4.253;DP=594;FS=21.292;HRun=13;HaplotypeScore=73.3036;InbreedingCoeff=0.3067;MQ=75.07;MQ0=3;MQRankSum=1.989;QD=12.09;ReadPosRankSum=2.314;VQSLOD=2.9142;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:11,24:35:36.83:408,0,37	1/1:1,0:10:14.20:71,14,0	0/0:29,0:22:17.42:0,17,107	0/0:14,0:11:5.85:0,6,40	1/1:8,21:29:53.92:476,54,0	1/1:4,10:15:29.87:265,30,0	0/1:7,9:17:28.87:177,0,29	1/1:13,4:32:41.53:348,42,0	1/1:6,1:20:34.42:184,34,0	1/1:6,7:14:3.22:148,3,0	1/1:4,11:16:11.93:202,12,0	1/1:2,19:23:26.37:363,26,0	1/1:5,15:20:2.84:293,3,0	1/1:5,13:19:3.32:161,3,0	1/1:13,13:28:44.87:428,45,0	1/1:4,19:23:42.05:390,42,0	1/1:5,3:29:42.94:243,43,0	1/1:8,13:21:14.05:260,14,0	1/1:8,14:23:24.26:336,24,0	1/1:5,9:17:31.79:291,32,0	1/1:3,7:10:21.02:195,21,0	0/1:9,4:13:28.96:29,0,112	0/1:17,3:21:15.27:15,0,181	0/0:11,0:13:14.22:0,14,154	0/1:7,13:21:30.43:152,0,30	1/1:11,23:36:64.20:573,64,0	1/1:10,20:31:5.87:310,6,0	1/1:0,12:13:17.17:189,17,0
chr10	62163395	.	TG	T	14050.97	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=4.430;DP=675;FS=5.759;HRun=8;HaplotypeScore=91.6744;InbreedingCoeff=0.9992;MQ=85.76;MQ0=0;MQRankSum=-6.366;QD=25.09;ReadPosRankSum=4.673;VQSLOD=5.2207;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,43:43:99:1245,129,0	1/1:0,8:8:24.04:232,24,0	0/0:31,0:31:66.01:0,66,734	0/0:24,0:24:53.20:0,53,635	1/1:3,24:27:60.09:579,60,0	1/1:3,18:21:54.09:521,54,0	1/1:2,19:21:54.09:521,54,0	1/1:6,29:35:84.09:794,84,0	1/1:0,18:18:48.08:464,48,0	1/1:2,28:30:84.09:801,84,0	1/1:0,20:20:60.10:579,60,0	1/1:2,34:36:93.15:898,93,0	1/1:1,16:17:45.07:435,45,0	1/1:2,15:17:45.07:434,45,0	1/1:2,31:33:84.13:811,84,0	1/1:5,31:36:81.13:782,81,0	1/1:2,27:29:78.12:753,78,0	1/1:0,11:11:27.04:261,27,0	1/1:5,19:24:60.06:564,60,0	1/1:4,21:25:43.31:586,43,0	1/1:3,17:20:51.08:492,51,0	0/0:24,0:24:66.19:0,66,785	0/0:18,0:18:45.07:0,45,505	0/0:18,0:18:54.11:0,54,619	1/1:1,21:22:57.09:550,57,0	1/1:1,26:27:78.03:735,78,0	1/1:4,22:26:66.10:637,66,0	1/1:1,13:14:39.06:377,39,0
chr10	62163909	.	GACTACATAGCCAGTTA	G	4063.88	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.469;DP=715;FS=1.387;HRun=0;HaplotypeScore=299.2635;InbreedingCoeff=0.9984;MQ=82.47;MQ0=0;MQRankSum=-5.378;QD=81.28;ReadPosRankSum=-0.427;VQSLOD=2.5951;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,129,9142	1/1:0,8:8:21.07:988,21,0	0/0:26,0:26:73.13:0,73,4105	0/0:15,0:15:45.15:0,45,2645	0/0:33,0:33:93.31:0,93,6839	0/0:16,0:16:45.15:0,45,3157	0/0:27,0:27:78.27:0,78,5511	1/1:7,17:22:48.13:1515,48,0	0/0:20,0:20:51.18:0,51,3811	0/0:24,0:24:69.23:0,69,4670	0/0:20,0:20:51.18:0,51,3583	0/0:24,0:24:69.24:0,69,4948	0/0:23,0:23:69.22:0,69,4869	0/0:33,0:33:96.33:0,96,6688	0/0:40,0:40:99:0,117,7828	0/0:37,0:37:99:0,108,8047	1/1:3,15:18:33.11:1561,33,0	0/0:22,0:22:60.21:0,60,4460	0/0:21,0:21:51.17:0,51,3037	0/0:24,0:24:72.25:0,72,4991	0/0:44,0:44:99:0,129,9327	0/0:19,0:19:51.17:0,51,3408	0/0:21,0:21:57.20:0,57,3995	0/0:26,0:26:78.25:0,78,5755	0/0:23,0:23:66.16:0,66,4575	0/0:29,0:29:87.29:0,87,5729	0/0:41,0:40:99:0,117,8448	0/0:12,0:12:36.12:0,36,2502
chr10	62164319	.	AAG	A	4257.95	PASS	AB=0.995;AC=33;AF=0.589;AN=56;BaseQRankSum=-1.456;DP=544;FS=26.064;HRun=0;HaplotypeScore=87.4348;InbreedingCoeff=0.0778;MQ=53.95;MQ0=4;MQRankSum=-1.884;QD=9.32;ReadPosRankSum=-6.560;VQSLOD=1.8338;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:31,0:31:40.73:280,0,41	1/1:5,5:10:29.53:317,30,0	0/0:7,0:3:8.86:0,9,80	0/0:11,0:8:17.55:0,18,169	0/1:26,2:28:12.84:260,0,13	1/1:21,0:21:7.66:118,8,0	0/1:13,0:13:2.97:59,0,3	1/1:9,17:25:71.42:669,71,0	0/1:14,0:13:6.07:53,0,6	0/1:19,0:19:10.45:67,0,10	1/1:19,1:18:10.47:180,10,0	0/1:18,0:18:5.78:94,0,6	0/1:15,0:15:4.45:81,0,4	0/1:17,0:17:12.84:48,0,13	1/1:25,0:25:8.42:202,8,0	0/1:24,0:24:20.59:164,0,21	1/1:16,12:28:78.81:795,79,0	0/1:24,0:24:31.07:67,0,31	1/1:19,0:15:0.81:108,1,0	0/1:18,0:18:5.31:80,0,5	0/1:15,0:15:11.21:39,0,11	0/0:18,0:18:40.66:0,41,564	0/0:25,0:25:33.30:0,33,679	0/0:26,0:26:56.64:0,57,730	0/1:27,0:26:3.17:157,0,3	1/1:16,0:16:6.75:133,7,0	1/1:17,0:17:21.32:207,21,0	1/1:12,0:12:15.32:80,15,0
chr10	62164320	.	AG	A	6203.89	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=2.723;DP=534;FS=12.057;HRun=1;HaplotypeScore=73.4810;InbreedingCoeff=0.9795;MQ=54.32;MQ0=4;MQRankSum=-3.030;QD=13.79;ReadPosRankSum=-3.923;VQSLOD=1.9351;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:28,3:31:62.72:496,63,0	1/1:9,1:10:27.97:199,28,0	0/0:7,0:3:8.80:0,9,65	0/0:11,0:8:17.53:0,18,142	1/1:25,3:28:59.02:386,59,0	1/1:17,3:20:41.03:259,41,0	1/1:11,2:13:26.05:173,26,0	1/1:22,3:24:63.23:520,63,0	1/1:14,1:14:29.61:217,30,0	1/1:15,2:17:32.84:190,33,0	1/1:19,2:19:43.96:306,44,0	1/1:17,0:18:24.05:194,24,0	1/1:15,0:15:21.86:142,22,0	1/1:15,1:16:28.79:168,29,0	1/1:25,0:25:36.85:291,37,0	1/1:20,4:24:36.04:241,36,0	1/1:29,0:29:83.61:597,84,0	1/1:25,0:25:32.86:203,33,0	1/1:17,2:15:34.42:231,34,0	1/1:16,2:18:40.95:250,41,0	1/1:14,1:15:22.69:156,23,0	0/0:17,0:17:39.56:0,40,458	0/0:24,0:24:23.67:0,24,523	0/0:25,0:25:59.56:0,60,575	1/1:24,2:25:37.34:251,37,0	1/1:16,0:16:38.58:251,39,0	1/1:14,2:16:40.08:301,40,0	1/1:8,0:8:23.80:184,24,0
chr10	62165067	.	G	GT	486.34	PASS	AB=1.000;AC=3;AF=0.056;AN=54;BaseQRankSum=-4.697;DP=689;FS=0.879;HRun=7;HaplotypeScore=94.7885;InbreedingCoeff=0.6928;MQ=69.19;MQ0=2;MQRankSum=-1.410;QD=11.86;ReadPosRankSum=0.535;VQSLOD=2.5445;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,114,1090	0/0:6,0:6:15.02:0,15,145	0/1:21,0:15:5.75:6,0,175	0/0:21,0:22:46.81:0,47,410	0/0:23,0:23:57.07:0,57,544	0/0:19,0:19:54.06:0,54,513	0/0:23,0:23:45.06:0,45,435	0/0:40,0:40:84.07:0,84,794	1/1:3,17:20:48.15:580,48,0	0/0:25,0:25:69.10:0,69,662	0/0:24,0:24:66.10:0,66,637	0/0:29,0:29:83.73:0,84,793	0/0:24,0:24:60.09:0,60,579	0/0:22,0:22:66.08:0,66,626	0/0:34,0:34:93.11:0,93,887	0/0:30,0:30:87.11:0,87,828	0/0:32,0:32:90.07:0,90,848	0/0:20,0:20:54.09:0,54,521	0/0:25,0:25:57.01:0,57,533	0/0:25,0:25:75.12:0,75,723	0/0:10,0:10:30.03:0,30,283	0/0:28,0:28:57.04:0,57,541	0/0:26,0:26:72.08:0,72,683	0/0:27,0:27:78.05:0,78,734	0/0:26,0:26:72.09:0,72,688	0/0:30,0:30:78.12:0,78,753	0/0:34,0:34:90.12:0,90,864	./.
chr10	62166345	.	TG	T	20530.90	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=6.413;DP=751;FS=14.469;HRun=3;HaplotypeScore=76.3516;InbreedingCoeff=0.9989;MQ=80.99;MQ0=0;MQRankSum=-6.087;QD=33.17;ReadPosRankSum=3.223;VQSLOD=3.9312;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,48:52:99:1561,126,0	1/1:0,9:9:27.08:332,27,0	0/0:17,0:17:45.12:0,45,601	0/0:21,0:21:46.41:0,46,634	1/1:0,21:21:63.14:762,63,0	1/1:0,20:20:54.17:669,54,0	1/1:0,32:32:87.27:1078,87,0	1/1:2,18:20:54.14:645,54,0	0/0:22,0:22:63.19:0,63,871	1/1:2,30:32:90.26:1087,90,0	1/1:0,8:8:21.07:260,21,0	1/1:1,37:38:99:1301,105,0	1/1:0,31:31:90.28:1115,90,0	1/1:0,30:30:78.25:967,78,0	1/1:0,37:37:96.30:1190,96,0	1/1:3,31:34:84.26:1041,84,0	1/1:1,36:37:99:1227,99,0	1/1:0,20:20:60.19:744,60,0	1/1:0,19:19:51.16:632,51,0	1/1:0,22:22:60:673,60,0	1/1:3,59:62:99:1949,159,0	0/0:20,0:20:54.18:0,54,777	0/0:17,0:17:51.17:0,51,729	0/0:35,0:35:99:0,102,1412	1/1:1,23:24:63.20:779,63,0	1/1:2,34:36:99:1254,102,0	1/1:0,25:25:72.23:892,72,0	1/1:0,10:10:30.09:372,30,0
chr10	62167429	.	GCGCGCGCGCACGCA	G	403.38	PASS	AB=1.000;AC=5;AF=0.093;AN=54;BaseQRankSum=-0.516;DP=401;FS=0.000;HRun=0;HaplotypeScore=147.2165;InbreedingCoeff=0.4653;MQ=68.96;MQ0=2;MQRankSum=-3.100;QD=10.90;ReadPosRankSum=-0.455;VQSLOD=2.5322;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:20.95:0,21,551	./.	0/0:6,0:6:2.84:0,3,14	0/0:16,0:10:6.01:0,6,95	1/1:16,0:16:1.35:3,1,0	0/0:9,0:9:15.05:0,15,810	0/0:34,0:34:31.45:0,31,1134	0/0:25,0:25:35.87:0,36,730	1/1:4,9:12:12.04:488,12,0	0/0:18,0:18:36.10:0,36,1218	0/1:8,0:8:0:1,0,0	0/0:15,0:15:3.01:0,3,165	0/0:8,0:8:12.04:0,12,619	0/0:8,0:8:6.02:0,6,328	0/0:7,0:7:9.02:0,9,143	0/0:7,0:7:6.02:0,6,315	0/0:25,0:25:15.05:0,15,702	0/0:19,0:19:15.05:0,15,794	0/0:19,0:19:42.12:0,42,1444	0/0:10,0:10:0.47:0,0,1	0/0:25,0:25:3.46:0,3,156	0/0:11,0:11:27.09:0,27,1553	0/0:8,0:8:24.08:0,24,1443	0/0:20,0:20:45.07:0,45,1924	0/0:8,0:8:12.04:0,12,517	0/0:12,0:12:24.08:0,24,787	0/0:10,0:10:2.64:0,3,83	0/0:12,0:12:6.02:0,6,326
chr10	62167441	.	GCA	G	234.96	PASS	AB=0.895;AC=13;AF=0.232;AN=56;BaseQRankSum=2.974;DP=361;FS=7.411;HRun=0;HaplotypeScore=98.8578;InbreedingCoeff=0.0849;MQ=64.15;MQ0=2;MQRankSum=-3.340;QD=1.73;ReadPosRankSum=0.784;VQSLOD=1.2335;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:8,15:22:8.79:51,0,9	0/0:1,1:2:3.01:0,3,38	0/1:7,0:6:1.54:2,0,54	0/0:14,0:8:7.90:0,8,105	1/1:4,11:15:2.57:16,3,0	0/0:11,0:11:19.99:0,20,140	0/0:27,2:29:26.18:0,26,217	0/1:17,3:20:98.82:133,0,99	1/1:9,0:8:11.47:58,11,0	0/1:15,1:16:21.05:21,0,204	0/1:9,0:9:0.41:0,0,1	0/0:8,1:9:8.73:0,9,54	0/0:8,0:8:14.93:0,15,120	0/0:5,0:5:12:0,12,114	0/1:4,0:4:19.21:35,0,19	0/0:2,2:4:5.04:0,5,33	0/0:25,4:29:15.66:0,16,199	0/0:19,0:19:25.31:0,25,205	0/1:16,0:16:9.71:10,0,247	0/0:7,4:11:11.76:0,12,90	0/0:25,0:25:29.65:0,30,250	0/0:10,0:10:30.09:0,30,526	0/0:10,0:10:30.10:0,30,532	0/0:19,0:19:48.07:0,48,752	0/0:8,1:9:17.51:0,18,121	0/1:7,1:8:39.72:40,0,56	0/1:6,3:9:13.97:14,0,32	0/0:10,1:11:8.73:0,9,61
chr10	62167443	.	A	ACG	190.02	PASS	AB=1.000;AC=14;AF=0.250;AN=56;BaseQRankSum=9.112;DP=365;FS=9.871;HRun=0;HaplotypeScore=102.5697;InbreedingCoeff=-0.0415;MQ=64.26;MQ0=2;MQRankSum=-9.418;QD=1.24;ReadPosRankSum=5.737;VQSLOD=0.8153;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:16,7:22:17.50:194,17,0	0/0:2,0:2:3.01:0,3,38	0/0:6,0:6:4.16:0,4,44	0/0:14,0:8:11.08:0,11,84	1/1:12,2:14:0.14:1,0,0	0/1:11,0:11:12.25:12,0,52	0/1:29,0:29:37.51:38,0,86	0/0:23,0:23:12.81:0,13,201	0/0:9,0:8:10.99:0,11,49	0/1:16,0:16:8.71:9,0,90	0/0:9,0:9:3:0,3,26	0/0:8,0:8:0.52:0,1,50	0/1:7,0:7:20.21:20,0,25	0/1:5,0:5:4.20:4,0,53	0/0:5,0:5:8.97:0,9,82	0/1:4,0:4:2.07:4,0,2	0/0:28,0:28:2.89:0,3,151	0/0:19,0:19:5.99:0,6,172	0/1:16,0:16:2.35:2,0,161	0/0:11,0:11:11.99:0,12,150	0/0:26,0:26:21.39:0,21,305	0/0:10,0:10:27.09:0,27,348	0/0:10,0:10:30.10:0,30,384	0/0:22,0:22:38.94:0,39,476	0/1:10,0:10:18.36:18,0,60	0/1:8,0:8:15.97:16,0,27	0/0:9,0:9:2.04:0,2,36	0/1:10,0:10:7.33:7,0,8
chr10	62171043	.	TCTGCCTC	T	1120.13	PASS	AB=0.524;AC=1;AF=0.018;AN=56;BaseQRankSum=6.393;DP=674;FS=8.919;HRun=0;HaplotypeScore=145.4665;InbreedingCoeff=-0.0184;MQ=57.16;MQ0=3;MQRankSum=-6.632;QD=50.92;ReadPosRankSum=1.561;VQSLOD=3.1675;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,132,5113	0/0:11,0:11:33.11:0,33,1319	0/0:19,0:10:27.09:0,27,930	0/0:23,0:20:51.17:0,51,1675	0/0:28,0:28:81.26:0,81,2825	0/0:23,0:23:69.24:0,69,2545	0/0:28,0:28:72.25:0,72,2830	0/0:29,0:29:75.26:0,75,2668	0/1:2,20:22:68.82:1195,0,69	0/0:25,0:25:72.25:0,72,2689	0/0:23,0:23:66.23:0,66,2530	0/0:21,0:20:63.22:0,63,2454	0/0:24,0:24:72.25:0,72,2833	0/0:17,0:17:48.16:0,48,1845	0/0:28,0:28:81.28:0,81,3106	0/0:38,0:38:99:0,111,4340	0/0:33,0:33:87.30:0,87,3357	0/0:33,0:33:93.32:0,93,3556	0/0:21,0:18:51.18:0,51,1858	0/0:19,0:19:54.19:0,54,2007	0/0:28,0:28:78.27:0,78,3119	0/0:13,0:13:39.13:0,39,1540	0/0:17,0:17:42.11:0,42,1430	0/0:28,0:28:81.28:0,81,3169	0/0:25,0:25:69.24:0,69,2682	0/0:21,0:21:57.20:0,57,2090	0/0:22,0:22:63.22:0,63,2373	0/0:7,0:7:21.07:0,21,840
chr10	62172719	.	C	CAG	12965.02	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-14.781;DP=469;FS=4.303;HRun=0;HaplotypeScore=52.8518;InbreedingCoeff=0.9898;MQ=82.79;MQ0=0;MQRankSum=-2.711;QD=46.14;ReadPosRankSum=2.843;VQSLOD=6.2906;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:87.29:0,87,1194	0/0:3,0:3:9.03:0,9,123	0/0:18,0:18:44.30:0,44,539	0/0:17,0:17:44.78:0,45,534	0/0:24,0:24:66.22:0,66,906	1/1:0,35:35:99:1810,102,0	1/1:3,27:31:69.24:1225,69,0	0/0:19,0:19:54.18:0,54,742	0/0:17,0:17:51.17:0,51,701	1/1:2,10:12:33.11:577,33,0	1/1:3,10:14:27.09:463,27,0	1/1:2,5:7:18.06:319,18,0	1/1:0,8:8:24.08:426,24,0	1/1:1,13:14:36.12:638,36,0	1/1:1,18:19:48.16:852,48,0	1/1:2,11:13:33.11:586,33,0	0/0:17,0:17:42.14:0,42,577	1/1:0,11:11:30.10:532,30,0	1/1:0,13:13:39.13:692,39,0	1/1:0,14:14:42.14:745,42,0	1/1:2,21:23:57.20:1012,57,0	0/0:15,0:15:42.14:0,42,577	0/0:15,0:15:42.14:0,42,576	0/0:13,0:13:36.12:0,36,494	1/1:1,11:13:33.11:586,33,0	1/1:2,17:19:54.18:957,54,0	1/1:3,15:19:51.13:854,51,0	1/1:3,13:16:39.13:692,39,0
chr10	62173212	.	T	TA	2539.55	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-6.211;DP=634;FS=6.696;HRun=0;HaplotypeScore=82.4313;InbreedingCoeff=0.9942;MQ=82.11;MQ0=0;MQRankSum=-2.793;QD=38.48;ReadPosRankSum=-0.345;VQSLOD=3.5332;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:93.29:0,93,1280	1/1:0,6:6:15.05:240,15,0	0/0:19,0:19:57.18:0,57,766	0/0:17,0:17:51.16:0,51,679	0/0:22,0:22:63.18:0,63,861	0/0:19,0:19:57.19:0,57,796	0/0:26,0:26:78.26:0,78,1091	1/1:0,27:27:72.15:1050,72,0	0/0:20,0:20:60.20:0,60,839	0/0:11,0:11:33.10:0,33,445	0/0:13,0:13:39.13:0,39,545	0/0:27,0:27:81.27:0,81,1132	0/0:26,0:26:78.26:0,78,1090	0/0:29,0:29:87.28:0,87,1199	0/0:23,0:23:69.23:0,69,965	0/0:27,0:27:78.26:0,78,1091	1/1:1,32:33:87.30:1391,87,0	0/0:33,0:33:96.29:0,96,1311	0/0:23,0:23:66.21:0,66,902	0/0:15,0:15:45.15:0,45,624	0/0:44,0:44:99:0,129,1781	0/0:19,0:19:57.19:0,57,794	0/0:16,0:16:48.14:0,48,653	0/0:21,0:21:63.20:0,63,864	0/0:22,0:22:66.20:0,66,904	0/0:28,0:28:81.25:0,81,1101	0/0:21,0:21:60.20:0,60,839	0/0:15,0:15:45.15:0,45,626
chr10	62180038	.	G	GGT	4170.83	PASS	AB=0.771;AC=33;AF=0.611;AN=54;BaseQRankSum=-2.613;DP=629;FS=0.584;HRun=0;HaplotypeScore=108.0797;InbreedingCoeff=-0.1192;MQ=66.12;MQ0=6;MQRankSum=-0.725;QD=8.08;ReadPosRankSum=-0.355;VQSLOD=3.3208;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:37:8.61:77,9,0	1/1:10,0:10:8.92:68,9,0	0/0:16,0:11:2.98:0,3,22	./.	1/1:11,0:15:2.79:26,3,0	0/1:12,13:25:36.51:205,0,37	0/1:18,8:27:19.84:290,0,20	1/1:16,0:16:12.43:105,12,0	1/1:14,0:20:17.87:143,18,0	0/1:17,9:26:88.26:310,0,88	0/1:11,2:12:17.40:39,0,17	0/1:12,15:28:25.38:476,0,25	0/1:13,8:23:69.80:160,0,70	1/1:15,5:20:2.11:126,2,0	0/1:18,16:34:32.44:215,0,32	0/1:16,6:22:72.77:223,0,73	1/1:11,0:19:11.74:90,12,0	0/1:14,9:23:99:197,0,123	0/1:21,0:21:13.30:68,0,13	1/1:6,10:18:23.41:326,23,0	1/1:32,15:47:18.06:272,18,0	0/0:11,0:12:8.84:0,9,71	0/0:17,0:17:18:0,18,174	0/0:35,0:37:59.85:0,60,591	0/1:13,4:17:24.30:82,0,24	0/1:15,6:22:77.49:137,0,77	1/1:8,15:22:33.11:498,33,0	0/1:8,1:9:36.25:36,0,58
chr10	62180223	.	C	CCTT	1130.13	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-4.942;DP=708;FS=0.901;HRun=0;HaplotypeScore=99.1022;InbreedingCoeff=0.8386;MQ=75.87;MQ0=2;MQRankSum=-1.434;QD=56.51;ReadPosRankSum=-0.867;VQSLOD=5.4663;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,108,1685	0/0:12,0:12:33.09:0,33,469	0/0:18,0:16:2.51:0,3,454	0/0:14,0:14:22.48:0,22,361	0/0:25,0:25:72.25:0,72,1126	0/0:28,0:28:69.22:0,69,1055	0/0:28,0:28:81.22:0,81,1217	0/0:29,0:29:72.24:0,72,1125	1/1:2,18:20:57.20:1225,57,0	0/0:33,0:33:84.29:0,84,1306	0/0:21,0:21:48.16:0,48,742	0/0:23,0:23:69.23:0,69,1057	0/0:25,0:25:66.22:0,66,1033	0/0:28,0:28:72.23:0,72,1085	0/0:39,0:39:99:0,105,1638	0/0:34,0:34:84.27:0,84,1293	0/0:34,0:34:87.27:0,87,1334	0/0:16,0:16:48.16:0,48,750	0/0:27,0:27:72.23:0,72,1104	0/0:23,0:23:66.22:0,66,1032	0/0:31,0:30:81.26:0,81,1241	0/0:18,0:18:51.17:0,51,798	0/0:15,0:15:39.13:0,39,610	0/0:28,0:28:75.26:0,75,1174	0/0:28,0:28:75.23:0,75,1150	0/0:27,0:27:72.20:0,72,1097	0/0:28,0:28:75.26:0,75,1173	0/0:15,0:15:39.13:0,39,610
chr10	62182020	.	G	GA	319.70	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.142;DP=683;FS=2.802;HRun=10;HaplotypeScore=72.0850;InbreedingCoeff=0.6635;MQ=75.57;MQ0=1;MQRankSum=-0.927;QD=16.83;ReadPosRankSum=-0.851;VQSLOD=3.9076;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,2:38:63.86:0,64,731	0/0:2,0:2:5.99:0,6,49	0/0:21,0:19:8.26:0,8,192	0/0:16,0:15:7.80:0,8,74	0/0:28,0:28:68.88:0,69,566	0/0:26,0:26:62.91:0,63,517	0/0:31,1:32:48.87:0,49,608	0/0:37,1:38:48.88:0,49,608	1/1:2,17:19:39.10:414,39,0	0/0:15,0:15:35.90:0,36,290	0/0:15,0:15:35.93:0,36,295	0/0:18,1:19:18.94:0,19,362	0/0:21,0:21:56.89:0,57,464	0/0:20,0:20:50.90:0,51,415	0/0:26,0:27:70.92:0,71,569	0/0:35,0:34:92.88:0,93,764	0/0:31,0:31:74.90:0,75,615	0/0:23,0:25:67:0,67,529	0/0:35,0:35:83.87:0,84,686	0/0:21,0:21:47.90:0,48,394	0/0:23,1:24:56.90:0,57,468	0/0:16,1:18:12:0,12,294	0/0:11,0:12:28.99:0,29,228	0/0:40,2:42:82.11:0,82,880	0/0:18,0:18:50.92:0,51,416	0/0:25,0:25:59.89:0,60,490	0/0:36,0:36:89.82:0,90,732	0/0:21,2:23:1.96:0,2,429
chr10	62182184	.	CACAT	C	11133.84	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=5.103;DP=707;FS=37.945;HRun=0;HaplotypeScore=130.5540;InbreedingCoeff=0.8712;MQ=57.59;MQ0=7;MQRankSum=2.904;QD=25.13;ReadPosRankSum=0.121;VQSLOD=2.8848;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,1:49:38.79:0,39,1601	0/0:4,0:4:6.01:0,6,77	0/0:22,0:11:2.97:0,3,20	0/0:15,0:10:2.98:0,3,22	0/0:34,0:34:63.23:0,63,1386	1/1:15,11:26:60.16:881,60,0	1/1:23,5:29:47.61:641,48,0	0/0:51,0:43:17.78:0,18,183	1/1:15,0:15:5.49:24,5,0	1/1:8,13:20:39.11:571,39,0	1/1:2,15:17:12.04:194,12,0	1/1:7,15:22:21.07:339,21,0	1/1:9,9:19:45.11:684,45,0	1/1:12,11:23:42.13:652,42,0	1/1:13,7:20:39.12:596,39,0	1/1:5,30:35:57.19:918,57,0	0/0:24,0:24:17.96:0,18,248	1/1:4,12:16:18.21:414,18,0	1/1:20,9:27:39.12:608,39,0	1/1:6,16:22:17.83:290,18,0	1/1:13,29:43:45.12:727,45,0	0/0:18,0:18:1.80:0,2,915	0/0:16,0:16:39.13:0,39,887	0/0:31,0:31:42.09:0,42,831	1/1:10,10:20:42.13:648,42,0	1/1:19,16:35:81.23:1189,81,0	1/1:20,19:39:90.19:1342,90,0	1/1:2,9:11:27.09:416,27,0
chr10	62182214	.	C	CAT	1638.87	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-6.275;DP=694;FS=12.967;HRun=0;HaplotypeScore=148.3192;InbreedingCoeff=0.8845;MQ=58.30;MQ0=11;MQRankSum=-1.999;QD=18.41;ReadPosRankSum=-6.320;VQSLOD=1.3274;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:84.18:0,84,1382	1/1:0,0:2:3.01:38,3,0	0/0:25,0:14:36.08:0,36,501	0/0:14,0:12:20.14:0,20,263	0/0:36,0:36:90.20:0,90,1254	0/0:24,0:24:59.95:0,60,561	0/0:24,0:24:57.69:0,58,615	1/1:15,44:49:99:1523,111,0	0/0:15,0:15:5.75:0,6,31	0/0:19,0:19:56.35:0,56,580	0/0:21,0:21:23.92:0,24,280	0/0:18,0:18:27:0,27,267	0/0:20,0:20:51.02:0,51,517	0/0:16,0:16:41.98:0,42,388	0/0:26,0:26:57.04:0,57,587	0/0:46,0:46:87.04:0,87,933	1/1:4,0:24:15.05:207,15,0	0/0:19,0:19:35.67:0,36,454	0/0:25,0:24:60.05:0,60,675	0/0:18,0:18:17.85:0,18,152	0/0:34,0:34:53.97:0,54,515	0/0:17,0:17:48.15:0,48,704	0/0:16,0:16:45.15:0,45,685	0/0:17,0:17:42.03:0,42,566	0/0:27,0:27:45:0,45,436	0/0:34,0:34:96.03:0,96,972	0/0:41,0:41:99:0,102,972	0/0:12,0:12:26.95:0,27,223
chr10	62182243	.	ATATCTATCTATCTATC	A	1649.84	PASS	AB=0.913;AC=23;AF=0.575;AN=40;BaseQRankSum=-0.053;DP=595;FS=0.000;HRun=0;HaplotypeScore=240.8882;InbreedingCoeff=0.4075;MQ=59.05;MQ0=16;MQRankSum=0.420;QD=5.69;ReadPosRankSum=-0.511;VQSLOD=2.0516;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:35:36.10:0,36,1338	./.	./.	./.	0/0:20,0:24:18.05:0,18,634	1/1:15,9:24:2.69:62,3,0	1/1:13,0:12:6.02:134,6,0	0/0:45,0:40:2.22:0,2,7	0/1:18,2:20:0:0,0,0	0/1:15,0:15:19.77:20,0,59	1/1:14,1:15:6.01:77,6,0	0/1:14,0:16:6.73:7,0,36	1/1:17,6:23:3.01:112,3,0	./.	./.	1/1:35,1:36:12.03:329,12,0	0/0:21,0:20:21.07:0,21,1338	1/1:15,0:16:3.01:123,3,0	1/1:20,0:16:6.02:171,6,0	./.	1/1:21,0:21:2.98:22,3,0	0/0:11,0:13:3.01:0,3,108	0/0:10,0:12:3.01:0,3,99	0/0:12,0:15:2.74:0,3,13	./.	1/1:15,12:27:27.07:600,27,0	1/1:29,14:43:3.01:130,3,0	./.
chr10	62182257	.	ATC	A	714.92	PASS	AB=0.950;AC=14;AF=0.259;AN=54;BaseQRankSum=1.863;DP=538;FS=20.349;HRun=0;HaplotypeScore=109.5454;InbreedingCoeff=0.0051;MQ=55.75;MQ0=24;MQRankSum=-0.498;QD=3.22;ReadPosRankSum=-3.264;VQSLOD=0.0222;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:57.82:0,58,888	./.	0/0:8,0:4:9.02:0,9,102	0/1:16,0:5:5.20:5,0,37	0/0:22,0:22:40.02:0,40,596	0/1:19,0:19:20.19:20,0,276	0/1:12,7:15:15.52:16,0,332	0/0:35,0:27:78.24:0,78,1078	1/1:14,5:18:6.02:91,6,0	0/0:15,0:14:33.76:0,34,474	0/1:12,0:12:27.16:27,0,142	0/0:18,0:18:30.05:0,30,360	0/1:20,0:20:9.04:9,0,432	0/0:15,0:15:21.06:0,21,282	0/0:27,0:27:30.10:0,30,428	0/1:33,3:34:75.83:76,0,783	0/0:22,0:20:26.96:0,27,485	0/1:15,0:15:9.43:9,0,385	0/1:14,3:13:95.05:95,0,430	1/1:11,1:11:9.03:135,9,0	0/0:15,0:15:24.08:0,24,342	0/0:10,0:10:24.08:0,24,343	0/0:13,0:12:27.09:0,27,385	0/0:10,0:10:11.72:0,12,185	0/0:27,0:27:33.09:0,33,428	0/1:22,0:22:99:177,0,458	0/0:38,0:38:45.58:0,46,837	0/1:15,0:15:99:209,0,134
chr10	62182620	.	GA	G	396.25	PASS	AB=0.841;AC=11;AF=0.196;AN=56;BaseQRankSum=-3.069;DP=420;FS=0.000;HRun=11;HaplotypeScore=55.2589;InbreedingCoeff=0.5023;MQ=47.22;MQ0=53;MQRankSum=0.622;QD=5.58;ReadPosRankSum=2.147;VQSLOD=1.1189;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,19:20:41.94:345,42,0	0/0:7,0:7:18.01:0,18,180	0/0:18,0:1:2.99:0,3,24	0/0:23,0:5:9.82:0,10,73	0/1:2,2:4:18.67:40,0,19	0/0:15,0:13:27.86:0,28,177	0/0:12,0:11:20.46:0,20,113	0/0:37,2:37:22.65:0,23,586	0/0:2,0:5:5.81:0,6,34	0/0:12,0:10:19.81:0,20,142	0/0:7,0:7:16.75:0,17,101	0/1:10,2:10:10:10,0,43	0/0:7,0:6:8.96:0,9,69	0/0:13,0:11:14.78:0,15,105	0/1:9,0:9:1.97:2,0,74	0/0:14,0:11:7.67:0,8,116	0/0:27,0:23:57.14:0,57,606	0/0:35,0:29:46.17:0,46,348	0/0:26,0:21:46.52:0,47,372	0/0:8,0:8:17.90:0,18,133	0/0:4,0:2:5.97:0,6,44	1/1:1,1:1:3:25,3,0	1/1:4,4:4:8.99:74,9,0	1/1:9,1:3:5.99:49,6,0	0/0:15,0:14:29.70:0,30,214	0/0:21,1:19:31.39:0,31,266	0/0:16,0:14:9.80:0,10,142	0/0:22,0:19:34.99:0,35,224
chr10	62182632	.	GA	G	4421.48	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-1.883;DP=404;FS=19.171;HRun=11;HaplotypeScore=43.0223;InbreedingCoeff=0.8877;MQ=56.23;MQ0=22;MQRankSum=0.794;QD=18.66;ReadPosRankSum=3.022;VQSLOD=3.8853;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:24:55.83:0,56,484	0/0:9,0:9:24.04:0,24,271	0/0:23,0:4:11.31:0,11,95	0/0:23,0:6:12.50:0,12,77	0/0:5,0:5:11.73:0,12,96	1/1:1,13:14:27.04:261,27,0	1/1:3,7:10:30.01:280,30,0	0/0:38,0:36:84.20:0,84,976	0/0:7,0:6:12.04:0,12,143	1/1:4,10:12:28.16:286,28,0	1/1:2,6:8:15.01:144,15,0	1/1:5,8:12:20.93:182,21,0	1/1:2,5:7:6:57,6,0	1/1:6,6:10:17.84:172,18,0	1/1:2,6:8:21.02:197,21,0	1/1:7,4:10:27.02:254,27,0	0/0:26,0:25:66.06:0,66,760	1/1:10,19:28:57.09:549,57,0	1/1:7,18:24:51.08:491,51,0	1/1:1,8:9:21.03:202,21,0	1/1:1,5:5:6.01:58,6,0	0/0:3,0:3:8.39:0,8,80	0/0:7,0:5:10.64:0,11,77	1/1:3,0:3:1.18:4,1,0	1/1:2,11:13:27.01:252,27,0	1/1:7,15:20:50.94:479,51,0	1/1:4,11:15:6.33:205,6,0	1/1:3,15:16:36.06:348,36,0
chr10	62184040	.	C	CG	1221.72	PASS	AB=0.926;AC=45;AF=0.804;AN=56;BaseQRankSum=0.707;DP=450;FS=9.684;HRun=11;HaplotypeScore=96.3286;InbreedingCoeff=0.0595;MQ=75.36;MQ0=0;MQRankSum=-0.652;QD=2.75;ReadPosRankSum=-0.941;VQSLOD=-0.4351;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:21:8.77:53,9,0	0/0:6,0:6:0.47:0,0,1	0/1:24,0:15:17.12:22,0,17	0/1:19,0:13:3.88:4,0,9	1/1:8,0:8:2.57:22,3,0	1/1:13,0:13:8.65:48,9,0	0/1:20,0:21:8.77:44,0,9	1/1:13,0:13:2.80:14,3,0	1/1:17,0:17:44.13:198,44,0	1/1:14,1:15:17.62:88,18,0	1/1:11,0:11:5.68:28,6,0	1/1:21,0:21:9.46:44,9,0	0/1:9,0:9:0:0,0,0	1/1:22,0:22:9.31:42,9,0	1/1:15,0:15:8.56:43,9,0	1/1:14,0:14:5.68:28,6,0	1/1:16,0:16:20.59:104,21,0	1/1:29,0:29:22.76:113,23,0	1/1:12,0:12:11.54:65,12,0	0/1:10,0:10:0:0,0,0	1/1:20,0:19:3.39:17,3,0	0/1:10,6:16:24.04:76,0,24	0/1:19,0:19:28.91:33,0,29	0/1:6,7:13:11.21:79,0,11	0/1:16,0:16:0:0,0,0	1/1:16,0:16:14.79:74,15,0	1/1:22,0:22:14.17:73,14,0	1/1:12,0:12:5.68:28,6,0
chr10	62184046	.	G	GT	299.55	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=1.514;DP=389;FS=0.000;HRun=0;HaplotypeScore=65.6287;InbreedingCoeff=0.3700;MQ=80.98;MQ0=0;MQRankSum=0.645;QD=7.13;ReadPosRankSum=5.939;VQSLOD=3.2252;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:20.78:0,21,148	0/0:5,0:5:0.47:0,0,1	0/1:25,0:16:20.37:20,0,144	0/0:20,0:14:26.36:0,26,190	0/0:8,0:8:13.71:0,14,106	0/0:18,0:18:8.54:0,9,62	0/0:21,0:21:19.19:0,19,138	0/0:17,0:17:30.02:0,30,211	1/1:3,14:17:47.84:383,48,0	0/0:12,0:12:23.38:0,23,136	0/0:9,0:9:8.41:0,8,47	0/0:17,0:17:11.20:0,11,48	0/0:7,0:8:5.70:0,6,31	0/0:17,0:17:17.51:0,18,114	0/0:8,0:8:8.42:0,8,40	0/0:9,0:9:5.50:0,5,32	0/0:16,0:16:25.15:0,25,136	0/0:20,0:20:22.15:0,22,125	0/0:10,0:10:25.84:0,26,184	0/0:4,0:4:2.96:0,3,20	0/0:19,0:18:9.07:0,9,55	0/0:16,0:16:8.41:0,8,141	0/0:13,0:13:26.98:0,27,229	0/0:14,0:14:12.24:0,12,178	0/0:14,0:14:6:0,6,50	0/0:13,0:13:22.46:0,22,139	0/0:19,0:19:17.94:0,18,93	0/0:6,0:6:5.54:0,6,25
chr10	62184051	.	G	GGGA	4836.40	PASS	AB=1.000;AC=41;AF=0.759;AN=54;BaseQRankSum=-3.295;DP=356;FS=27.895;HRun=0;HaplotypeScore=50.8946;InbreedingCoeff=0.6805;MQ=77.46;MQ0=0;MQRankSum=-2.575;QD=18.25;ReadPosRankSum=2.565;VQSLOD=2.2706;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:20.19:0,20,177	1/1:0,0:6:2.95:20,3,0	0/0:13,0:10:16.83:0,17,155	0/1:16,0:12:14.02:14,0,103	0/0:10,0:10:21.27:0,21,138	1/1:0,15:21:10.23:156,10,0	1/1:2,14:19:2.32:169,2,0	1/1:1,0:16:41.94:360,42,0	1/1:4,0:18:54.16:1031,54,0	1/1:2,9:12:27.51:416,28,0	1/1:0,1:8:11.95:138,12,0	1/1:1,11:13:9.03:195,9,0	1/1:1,7:8:2.91:21,3,0	1/1:2,9:15:11.67:164,12,0	1/1:3,4:9:8.91:164,9,0	1/1:1,10:12:5.85:133,6,0	1/1:2,0:15:21.07:323,21,0	1/1:0,16:18:24.08:484,24,0	1/1:1,4:7:10.72:209,11,0	1/1:1,0:2:2.97:20,3,0	1/1:2,12:17:6.45:58,6,0	0/0:15,0:16:24.71:0,25,204	0/0:10,0:10:26.39:0,26,229	0/0:13,0:13:22.49:0,22,175	./.	1/1:0,1:8:24.03:327,24,0	1/1:1,17:18:14.81:302,15,0	1/1:0,6:6:6.02:132,6,0
chr10	62186492	.	CT	C	1508.60	PASS	AB=0.822;AC=33;AF=0.589;AN=56;BaseQRankSum=-1.555;DP=420;FS=12.419;HRun=15;HaplotypeScore=68.8440;InbreedingCoeff=0.2993;MQ=73.46;MQ0=11;MQRankSum=-0.578;QD=5.26;ReadPosRankSum=4.548;VQSLOD=1.0895;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,5:14:24.17:144,24,0	0/0:4,0:6:11.55:0,12,64	0/1:33,0:17:0.20:0,0,62	0/0:38,1:22:8.85:0,9,36	1/1:5,15:21:11.03:190,11,0	1/1:9,3:12:14.70:96,15,0	1/1:7,6:14:23.53:142,24,0	0/0:23,0:27:30.11:0,30,177	0/1:11,0:11:4.34:4,0,10	1/1:7,6:13:14.66:96,15,0	0/1:6,5:13:4.54:85,0,5	0/1:6,1:7:13.27:13,0,21	1/1:9,2:10:8.64:51,9,0	0/0:4,0:3:0:0,0,0	1/1:10,6:16:29.45:190,29,0	1/1:7,1:8:2.80:19,3,0	0/0:22,0:26:43.92:0,44,278	0/1:11,5:18:12.49:119,0,12	0/1:11,3:14:12.83:61,0,13	0/1:8,4:13:26.89:92,0,27	0/1:9,2:11:14.63:45,0,15	0/0:6,0:6:8.98:0,9,76	0/1:10,4:14:23.62:24,0,64	0/0:21,0:21:32.84:0,33,259	1/1:7,2:10:15.81:87,16,0	1/1:4,2:7:11.80:76,12,0	1/1:8,3:14:2.09:90,2,0	1/1:8,2:10:10.84:63,11,0
chr10	62186495	.	TTTTTTTTTTTTTGGTTC	T	173.08	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=-0.083;DP=498;FS=12.584;HRun=0;HaplotypeScore=209.8295;InbreedingCoeff=0.5921;MQ=64.65;MQ0=14;MQRankSum=-0.960;QD=3.53;ReadPosRankSum=0.375;VQSLOD=1.7527;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:51.12:0,51,2858	0/0:6,0:6:15.03:0,15,796	0/1:34,0:12:1.76:2,0,185	0/0:38,0:18:26.70:0,27,482	0/0:25,0:25:54.51:0,55,3235	0/0:14,0:14:33.03:0,33,1886	0/0:15,0:15:29.86:0,30,1673	0/0:29,0:28:21.94:0,22,1872	1/1:7,8:15:6.02:253,6,0	0/0:22,0:21:51.01:0,51,2603	0/0:11,0:11:27.09:0,27,1427	0/0:12,0:12:21.03:0,21,934	0/0:12,0:11:20.86:0,21,1054	0/0:11,0:10:9.44:0,9,416	0/0:23,0:23:54.02:0,54,2710	0/0:10,0:10:23.98:0,24,1249	0/0:27,0:26:37.14:0,37,3421	0/0:29,0:28:68.96:0,69,3991	0/0:17,0:17:32.84:0,33,1423	0/0:18,0:18:45.05:0,45,2593	0/0:12,0:11:23.94:0,24,742	0/0:8,0:8:17.57:0,18,1090	0/0:13,0:13:33.08:0,33,1588	0/0:20,0:20:41.86:0,42,2712	0/0:15,0:14:38.33:0,38,2020	0/0:13,0:13:32.44:0,32,1398	0/0:20,0:19:54.13:0,54,2860	0/0:8,0:7:15.03:0,15,839
chr10	62186512	.	C	CT	2261.64	PASS	AB=0.874;AC=35;AF=0.625;AN=56;BaseQRankSum=-0.944;DP=498;FS=10.088;HRun=15;HaplotypeScore=78.6067;InbreedingCoeff=-0.0735;MQ=67.12;MQ0=16;MQRankSum=-1.793;QD=5.60;ReadPosRankSum=-1.741;VQSLOD=1.3875;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:16,3:22:35.98:36,0,82	1/1:4,2:6:5.92:42,6,0	0/1:37,0:12:9.08:9,0,21	0/0:43,0:21:5.84:0,6,29	0/0:24,0:26:13.26:0,13,154	1/1:9,2:12:11.24:109,11,0	0/1:10,2:13:13.04:13,0,40	1/1:19,8:27:34.73:253,35,0	0/1:11,0:11:5.70:12,0,6	0/1:15,2:19:9.01:156,0,9	0/1:12,2:14:2:66,0,2	0/1:7,6:13:16.46:16,0,26	1/1:10,0:9:9.77:123,10,0	1/1:5,7:11:5.99:50,6,0	1/1:14,7:21:11.18:163,11,0	1/1:6,2:9:2.63:109,3,0	0/1:20,3:22:20.13:168,0,20	0/1:23,4:27:29.23:237,0,29	1/1:13,4:17:15.71:132,16,0	1/1:13,4:17:2.65:104,3,0	0/1:9,1:9:17.08:17,0,27	0/0:6,0:6:7.87:0,8,42	0/1:12,0:13:18.76:19,0,28	0/0:14,2:17:5.17:0,5,124	1/1:13,4:16:29.79:231,30,0	0/1:9,6:18:23.55:120,0,24	0/1:20,5:24:19.70:202,0,20	1/1:6,0:6:5.84:39,6,0
chr10	62188679	.	T	TA	331.59	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-2.628;DP=621;FS=1.835;HRun=11;HaplotypeScore=66.5466;InbreedingCoeff=0.9034;MQ=66.14;MQ0=1;MQRankSum=0.004;QD=15.07;ReadPosRankSum=-1.442;VQSLOD=3.8382;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:74.29:0,74,549	0/0:8,0:8:14.91:0,15,113	0/0:35,0:30:48.61:0,49,343	0/0:20,0:17:13.60:0,14,114	0/0:35,0:37:79.65:0,80,594	0/0:22,0:23:52.69:0,53,389	0/0:15,0:15:38.80:0,39,295	0/0:38,0:37:76.45:0,76,569	1/1:5,17:22:42.08:426,42,0	0/0:34,0:34:33.54:0,34,448	0/0:22,0:23:52.82:0,53,398	0/0:17,0:17:39.71:0,40,303	0/0:18,0:18:50.80:0,51,395	0/0:18,0:18:44.79:0,45,346	0/0:18,0:18:46.85:0,47,352	0/0:22,0:22:59.74:0,60,461	0/0:22,0:22:59.73:0,60,459	0/0:14,1:14:8.39:0,8,244	0/0:16,0:18:36.92:0,37,265	0/0:26,1:27:38.27:0,38,476	0/0:17,0:17:38.83:0,39,302	0/0:13,0:13:32.86:0,33,255	0/0:25,1:26:29.19:0,29,404	0/0:14,0:14:35.84:0,36,279	0/0:22,0:23:55.80:0,56,422	0/0:22,1:23:31.69:0,32,418	0/0:25,0:25:62.71:0,63,485	0/0:11,0:11:29.89:0,30,232
chr10	62192309	.	T	TG	543.64	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-4.432;DP=562;FS=4.294;HRun=2;HaplotypeScore=54.6386;InbreedingCoeff=0.9930;MQ=72.25;MQ0=1;MQRankSum=-1.165;QD=33.98;ReadPosRankSum=0.438;VQSLOD=3.6518;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:72.21:0,72,880	0/0:13,0:13:39.12:0,39,484	0/0:16,0:14:39.12:0,39,480	0/0:24,0:22:48.22:0,48,673	0/0:23,0:23:69.22:0,69,855	0/0:7,0:7:21.07:0,21,260	0/0:14,0:14:39.12:0,39,483	0/0:28,0:28:81.20:0,81,976	1/1:1,15:16:45.15:639,45,0	0/0:32,0:32:96.29:0,96,1180	0/0:14,0:14:36.11:0,36,446	0/0:15,0:15:45.14:0,45,558	0/0:14,0:14:42.13:0,42,521	0/0:14,0:14:39.12:0,39,483	0/0:19,0:19:57.18:0,57,707	0/0:22,0:22:63.20:0,63,781	0/0:37,0:37:99:0,105,1269	0/0:27,0:27:81.25:0,81,1001	0/0:17,0:17:51.13:0,51,599	0/0:25,0:25:72.23:0,72,893	0/0:30,0:30:81.25:0,81,1004	0/0:23,0:23:69.22:0,69,855	0/0:26,0:26:75.22:0,75,917	0/0:11,0:11:30.09:0,30,372	0/0:22,0:22:66.21:0,66,818	0/0:24,0:24:66.21:0,66,818	0/0:17,0:17:51.15:0,51,618	0/0:8,0:8:24.08:0,24,298
chr10	62192455	.	C	CAT	708.03	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-6.027;DP=643;FS=0.000;HRun=0;HaplotypeScore=85.1474;InbreedingCoeff=0.9948;MQ=83.39;MQ0=0;MQRankSum=-0.417;QD=35.40;ReadPosRankSum=2.045;VQSLOD=5.8234;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:72.23:0,72,916	0/0:9,0:9:23.90:0,24,271	0/0:28,0:28:48.14:0,48,577	0/0:13,0:13:27.06:0,27,328	0/0:18,0:19:54:0,54,663	0/0:19,0:19:42.13:0,42,534	0/0:15,0:15:36.10:0,36,444	0/0:38,0:35:81.25:0,81,1020	1/1:0,20:20:48.16:803,48,0	0/0:35,0:35:90.28:0,90,1136	0/0:25,0:25:66.20:0,66,826	0/0:24,0:24:63.18:0,63,775	0/0:15,0:16:41.95:0,42,497	0/0:25,0:25:66.19:0,66,824	0/0:26,0:26:69.22:0,69,877	0/0:34,0:34:90.28:0,90,1131	0/0:17,0:17:39.10:0,39,479	0/0:16,0:16:27.09:0,27,343	0/0:24,0:24:54.17:0,54,687	0/0:27,0:28:75.05:0,75,909	0/0:15,0:15:33.11:0,33,419	0/0:14,0:14:42.11:0,42,519	0/0:26,0:26:66.19:0,66,824	0/0:16,0:16:30.08:0,30,368	0/0:23,0:23:60.16:0,60,734	0/0:37,0:37:99:0,102,1273	0/0:30,0:30:84.27:0,84,1068	0/0:21,0:21:60.16:0,60,734
chr10	62192473	.	CTGAACAATAATACTTTTTTCCTTTTTT	C	2343.59	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=5.020;DP=635;FS=0.888;HRun=0;HaplotypeScore=414.2869;InbreedingCoeff=0.9750;MQ=79.70;MQ0=0;MQRankSum=-1.665;QD=44.22;ReadPosRankSum=-1.470;VQSLOD=0.9935;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:75.04:0,75,7819	1/1:2,9:11:18.06:1313,18,0	0/0:21,0:21:57.20:0,57,3336	0/0:15,0:15:31.11:0,31,2371	0/0:24,0:24:69.24:0,69,7472	0/0:15,0:15:42.14:0,42,4639	0/0:18,0:18:54.19:0,54,6076	1/1:22,6:25:27.09:510,27,0	0/0:24,0:24:60.21:0,60,6822	0/0:37,0:37:99:0,108,12078	0/0:26,0:26:78.25:0,78,8039	0/0:25,0:25:72.25:0,72,8068	0/0:21,0:21:57.18:0,57,5925	0/0:25,0:25:75.26:0,75,8692	0/0:24,0:24:69.24:0,69,7760	0/0:32,0:32:96.33:0,96,10790	1/1:7,7:14:9.03:656,9,0	0/0:13,0:13:36.11:0,36,3933	0/0:28,0:28:84.27:0,84,7013	0/0:31,0:31:90.04:0,90,9683	0/0:16,0:16:48.16:0,48,5528	0/0:16,0:16:48.16:0,48,5593	0/0:25,0:25:66.23:0,66,7479	0/0:10,0:10:27.08:0,27,2497	0/0:22,0:22:66.20:0,66,6156	0/0:34,0:34:99:0,99,11514	0/0:34,0:34:99:0,99,11164	0/0:20,0:20:60.21:0,60,6134
chr10	62193743	.	T	TACACAC	6196.60	PASS	AB=0.831;AC=45;AF=0.865;AN=52;BaseQRankSum=-2.746;DP=602;FS=0.000;HRun=0;HaplotypeScore=140.4833;InbreedingCoeff=0.0927;MQ=60.57;MQ0=9;MQRankSum=-0.361;QD=12.83;ReadPosRankSum=-1.712;VQSLOD=3.3132;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:40,1:43:66.09:1008,66,0	1/1:8,0:8:3.01:90,3,0	./.	./.	1/1:17,0:17:15.05:267,15,0	1/1:11,1:25:6.02:135,6,0	1/1:19,3:27:3.01:38,3,0	1/1:29,0:28:30.01:422,30,0	1/1:21,0:21:30.06:640,30,0	1/1:22,0:21:27:503,27,0	1/1:12,0:11:6.02:112,6,0	1/1:15,4:23:7.38:178,7,0	1/1:7,4:13:6.02:167,6,0	1/1:10,4:15:5.56:192,6,0	1/1:14,0:25:8.17:115,8,0	1/1:6,7:15:9.03:231,9,0	1/1:18,0:18:18.03:376,18,0	1/1:20,0:19:27.06:492,27,0	1/1:12,0:19:10.99:223,11,0	1/1:7,0:12:5.81:52,6,0	1/1:19,0:32:5.80:53,6,0	0/0:13,0:24:0.88:0,1,2	0/1:18,0:18:11.51:85,0,12	0/1:21,0:25:39.31:39,0,148	1/1:6,4:14:6.02:192,6,0	1/1:8,8:20:23.42:368,23,0	0/0:18,0:24:2.64:0,3,5	0/1:3,4:8:42.04:219,0,42
chr10	62194337	.	C	CG	444.60	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-5.491;DP=374;FS=4.271;HRun=1;HaplotypeScore=57.2778;InbreedingCoeff=0.8001;MQ=57.82;MQ0=1;MQRankSum=1.296;QD=26.15;ReadPosRankSum=-1.342;VQSLOD=3.1030;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:20:57.16:0,57,718	0/0:4,0:4:6.02:0,6,77	0/0:9,0:4:12.04:0,12,156	0/0:14,0:6:12.04:0,12,155	0/0:14,0:14:39.11:0,39,492	0/0:14,0:14:36.12:0,36,466	0/0:19,0:19:45.11:0,45,553	0/0:15,0:15:45.15:0,45,584	1/1:2,15:17:36.12:539,36,0	0/0:16,0:15:45.15:0,45,583	0/0:4,0:4:9.03:0,9,111	0/0:15,0:14:42.14:0,42,544	0/0:14,0:13:33.11:0,33,427	0/0:13,0:13:39.13:0,39,501	0/0:12,0:12:33.09:0,33,410	0/0:16,0:15:45.15:0,45,582	0/0:16,0:16:45.15:0,45,580	0/0:18,0:18:54.18:0,54,700	0/0:20,0:19:54.17:0,54,695	0/0:9,0:9:21.07:0,21,265	0/0:15,1:16:36.12:0,36,466	0/0:15,0:15:45.13:0,45,568	0/0:11,0:11:24.08:0,24,306	0/0:13,0:13:27.09:0,27,350	0/0:8,0:8:23.56:0,24,281	0/0:11,0:11:24.08:0,24,311	0/0:9,0:7:18.06:0,18,231	0/0:9,0:9:24.08:0,24,311
chr10	62194364	.	AG	A	1306.90	PASS	AB=0.973;AC=30;AF=0.536;AN=56;BaseQRankSum=1.540;DP=487;FS=0.965;HRun=1;HaplotypeScore=82.6882;InbreedingCoeff=-0.4667;MQ=48.40;MQ0=10;MQRankSum=-4.433;QD=2.94;ReadPosRankSum=7.322;VQSLOD=-0.6063;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:5.56:0,6,109	0/1:9,0:8:2.22:2,0,42	0/1:27,0:11:12.90:13,0,87	0/1:26,0:7:1.34:1,0,58	0/1:16,0:16:25.18:25,0,80	0/1:20,0:20:28.68:70,0,29	1/1:19,0:19:5.76:81,6,0	0/1:25,0:23:48.90:98,0,49	0/1:13,0:13:29.17:29,0,48	0/1:14,0:13:6.87:66,0,7	0/1:15,0:16:1.75:81,0,2	1/1:21,0:20:14.72:125,15,0	0/1:5,1:5:11.58:33,0,12	0/1:16,0:15:13.70:50,0,14	1/1:23,0:22:1.06:119,1,0	0/1:14,1:14:48.80:49,0,49	0/1:14,0:14:10.60:32,0,11	0/1:15,0:15:25.57:98,0,26	0/1:20,0:19:9.30:9,0,73	0/1:16,1:15:51.66:54,0,52	0/1:9,0:7:0.35:15,0,0	0/1:20,0:20:40.98:41,0,114	0/0:13,0:13:8.24:0,8,95	0/1:15,2:17:36.12:54,0,36	0/1:12,1:13:58.45:91,0,58	0/1:18,1:20:0.29:91,0,0	1/1:23,0:20:8.76:113,9,0	0/1:11,0:10:12.50:12,0,39
chr10	62194614	.	G	GT	953.59	PASS	AB=0.933;AC=13;AF=0.232;AN=56;BaseQRankSum=-3.212;DP=539;FS=3.094;HRun=12;HaplotypeScore=68.4574;InbreedingCoeff=0.3088;MQ=58.56;MQ0=2;MQRankSum=0.191;QD=4.15;ReadPosRankSum=-1.490;VQSLOD=0.8735;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:35,3:42:1.94:2,0,441	1/1:2,2:4:6.01:58,6,0	0/0:10,0:8:0.96:0,1,20	0/0:8,0:5:3.65:0,4,25	0/1:21,1:21:8.31:8,0,239	0/0:20,0:21:43.75:0,44,310	0/1:31,3:34:1.16:1,0,369	1/1:10,13:24:41.84:373,42,0	0/1:24,0:24:1.70:2,0,142	0/1:16,2:18:17.93:18,0,184	0/0:13,0:13:29.58:0,30,215	0/1:17,2:20:20.51:21,0,185	0/1:9,1:10:2.33:2,0,147	0/0:11,1:12:23.78:0,24,173	0/0:18,0:18:35.79:0,36,263	0/0:24,1:25:15.54:0,16,277	1/1:4,26:30:47.19:616,47,0	0/0:12,1:13:9.61:0,10,233	0/0:14,1:15:5.61:0,6,190	0/0:18,0:16:38.75:0,39,281	0/0:19,1:21:35.78:0,36,263	0/0:9,0:8:20.86:0,21,152	0/0:11,0:12:19.90:0,20,137	0/0:26,3:29:17.02:0,17,440	0/0:16,1:18:19.05:0,19,224	0/0:19,1:22:22.10:0,22,296	0/0:28,1:30:33.43:0,33,377	0/0:12,1:12:24.22:0,24,196
chr10	62195072	.	TCAGGACCTTGGGAAGAGCAGTCAGTGCTCTTAACCA	T	767.15	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.984;DP=493;FS=0.000;HRun=0;HaplotypeScore=394.5982;InbreedingCoeff=0.6488;MQ=57.01;MQ0=8;MQRankSum=-2.825;QD=109.59;ReadPosRankSum=1.970;VQSLOD=1.9488;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:74.86:0,75,9993	0/0:7,0:7:21.07:0,21,2983	0/0:5,0:3:6.02:0,6,486	0/0:14,0:2:3.01:0,3,178	0/0:14,0:14:39.13:0,39,6069	0/0:17,0:17:51.18:0,51,7384	0/0:17,0:17:51.18:0,51,5676	0/0:28,0:25:66.20:0,66,4171	1/1:2,5:7:9.03:850,9,0	0/0:17,0:17:48.16:0,48,6465	0/0:12,0:12:33.11:0,33,3723	0/0:14,0:14:42.14:0,42,6245	0/0:19,0:19:57.20:0,57,7035	0/0:24,0:24:72.25:0,72,9654	0/0:24,0:24:65.75:0,66,9100	0/0:26,0:26:78.25:0,78,10539	0/0:39,0:39:99:0,117,16903	0/0:33,0:33:96.29:0,96,13568	0/0:17,0:12:27.09:0,27,2542	0/0:14,0:13:33.10:0,33,4348	0/0:19,0:18:48.16:0,48,6637	0/0:3,0:3:9.03:0,9,1499	0/0:4,0:4:9.03:0,9,1001	0/0:15,0:15:45.15:0,45,6286	0/0:12,0:12:36.12:0,36,4944	0/0:18,0:18:51.18:0,51,7089	0/0:39,0:39:99:0,117,15334	0/0:6,0:6:18.06:0,18,1551
chr10	62196485	.	C	CT	3512.53	PASS	AB=0.659;AC=37;AF=0.661;AN=56;BaseQRankSum=-2.055;DP=460;FS=20.599;HRun=13;HaplotypeScore=67.0228;InbreedingCoeff=0.4534;MQ=63.88;MQ0=7;MQRankSum=-1.119;QD=9.54;ReadPosRankSum=-0.778;VQSLOD=0.8054;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:19,3:25:10.92:11,0,199	1/1:9,0:9:11:61,11,0	0/0:11,0:6:2.79:0,3,13	0/0:16,0:12:8.49:0,8,66	0/0:14,1:16:1.14:0,1,143	0/1:3,16:19:2.02:267,0,2	1/1:8,13:23:29.03:287,29,0	1/1:28,0:27:18.04:82,18,0	0/0:11,0:12:13.83:0,14,88	0/1:5,10:16:4.82:230,0,5	1/1:4,2:6:6.01:56,6,0	1/1:3,6:9:6.01:55,6,0	1/1:1,5:6:15.02:139,15,0	1/1:5,8:13:10.37:128,10,0	1/1:9,11:17:17.21:285,17,0	1/1:5,14:19:7.33:204,7,0	1/1:31,0:27:31.03:149,31,0	1/1:5,16:20:21.46:341,21,0	0/1:7,14:22:6.99:294,0,7	1/1:6,10:15:23.78:192,24,0	1/1:6,9:14:14.18:161,14,0	0/0:7,0:7:14.87:0,15,103	0/0:6,0:7:8.89:0,9,62	0/0:22,0:22:35.55:0,36,331	0/1:9,9:19:23.98:116,0,24	1/1:10,10:20:0.25:218,0,0	1/1:5,12:17:6.30:152,6,0	1/1:7,4:10:9.01:83,9,0
chr10	62196933	.	C	CCCA	1191.80	PASS	AC=2;AF=0.037;AN=54;BaseQRankSum=-1.629;DP=678;FS=0.837;HRun=0;HaplotypeScore=99.9436;InbreedingCoeff=0.9868;MQ=80.44;MQ0=1;MQRankSum=-2.328;QD=45.84;ReadPosRankSum=1.279;VQSLOD=5.5940;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,153,2334	./.	0/0:31,0:29:66.22:0,66,991	0/0:21,0:22:41.84:0,42,585	0/0:15,0:15:36.12:0,36,547	0/0:20,0:20:57.18:0,57,860	0/0:37,0:37:99:0,102,1556	0/0:35,0:35:78.26:0,78,1187	1/1:4,21:26:60.21:1286,60,0	0/0:22,0:21:54.18:0,54,836	0/0:18,0:18:48.16:0,48,742	0/0:33,0:33:78.26:0,78,1206	0/0:18,0:18:51.17:0,51,789	0/0:28,0:28:75.25:0,75,1161	0/0:34,0:34:75.20:0,75,1139	0/0:28,0:28:81.26:0,81,1230	0/0:42,0:42:99:0,120,1811	0/0:27,0:27:75.22:0,75,1129	0/0:21,0:21:54.18:0,54,835	0/0:11,0:11:27.09:0,27,418	0/0:49,0:49:99:0,123,1882	0/0:15,0:15:42.14:0,42,648	0/0:13,0:13:39.13:0,39,602	0/0:21,0:21:57.19:0,57,880	0/0:8,0:7:21.05:0,21,302	0/0:24,0:24:52.91:0,53,918	0/0:18,0:18:54.18:0,54,836	0/0:7,0:7:18.06:0,18,276
chr10	62197316	.	T	TCACA	1815.55	PASS	AB=0.911;AC=38;AF=0.731;AN=52;BaseQRankSum=-5.293;DP=446;FS=3.009;HRun=0;HaplotypeScore=104.5011;InbreedingCoeff=0.3534;MQ=63.54;MQ0=7;MQRankSum=2.999;QD=5.73;ReadPosRankSum=-0.470;VQSLOD=2.3957;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:28:10.87:104,0,11	0/1:2,0:2:0:0,0,0	./.	./.	0/1:9,0:9:15.92:16,0,50	1/1:15,0:15:6.91:81,7,0	1/1:31,0:29:11.98:114,12,0	1/1:10,0:10:5.93:40,6,0	0/0:17,0:17:21.02:0,21,195	1/1:16,0:15:18:221,18,0	1/1:14,0:14:11.97:96,12,0	1/1:14,0:14:5.99:50,6,0	1/1:13,1:14:15:187,15,0	1/1:12,0:12:10.46:161,10,0	1/1:22,0:21:20.98:222,21,0	0/1:8,9:18:22.92:64,0,23	1/1:11,3:19:2.90:16,3,0	1/1:4,6:13:6.02:122,6,0	1/1:9,0:9:6.01:61,6,0	1/1:12,2:15:3.01:70,3,0	1/1:27,0:26:8.98:72,9,0	0/0:9,0:17:5.99:0,6,49	0/0:9,0:16:2.48:0,2,10	0/0:14,0:25:6.01:0,6,56	0/0:4,0:9:0:0,0,0	1/1:9,8:18:15.44:180,15,0	1/1:8,0:7:9.33:61,9,0	1/1:2,0:2:2.98:22,3,0
chr10	62197320	.	A	ACACA	1751.05	PASS	AB=1.000;AC=38;AF=0.731;AN=52;BaseQRankSum=-5.521;DP=482;FS=1.252;HRun=0;HaplotypeScore=114.0225;InbreedingCoeff=0.3276;MQ=59.66;MQ0=10;MQRankSum=2.458;QD=4.78;ReadPosRankSum=-0.572;VQSLOD=2.4515;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:32,0:32:10.87:104,0,11	0/1:2,0:2:0:0,0,0	./.	./.	0/1:12,0:11:16.04:16,0,50	1/1:17,0:17:6.90:81,7,0	1/1:31,0:28:11.98:114,12,0	1/1:13,0:12:5.93:40,6,0	0/0:17,0:17:21.02:0,21,195	1/1:15,0:14:19.81:226,20,0	1/1:14,0:14:11.97:96,12,0	1/1:10,5:16:5.99:50,6,0	1/1:15,0:15:14.96:162,15,0	1/1:13,0:13:10.46:161,10,0	1/1:24,0:23:20.98:222,21,0	0/1:22,0:22:22.92:64,0,23	1/1:20,0:20:2.90:16,3,0	1/1:15,0:15:4.57:73,5,0	1/1:12,0:12:6.47:54,6,0	1/1:17,0:17:3.01:70,3,0	0/1:34,0:33:0.23:61,0,0	0/0:17,0:17:5.99:0,6,49	0/0:15,0:15:2.48:0,2,10	0/0:25,0:25:6.01:0,6,56	0/1:10,0:10:0:0,0,0	1/1:19,0:18:15.44:180,15,0	1/1:11,0:10:13.19:83,13,0	1/1:2,0:2:2.98:22,3,0
chr10	62197342	.	ACACACACACACACACACACACG	A	1303	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=-3.284;DP=491;FS=1.514;HRun=0;HaplotypeScore=211.6699;InbreedingCoeff=-0.1347;MQ=49.26;MQ0=17;MQRankSum=0.852;QD=5.17;ReadPosRankSum=-5.865;VQSLOD=0.8517;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:38.62:0,39,3420	0/0:2,0:2:6.02:0,6,357	0/1:17,0:4:5.01:5,0,35	0/0:14,0:4:8.98:0,9,169	0/0:12,0:10:10.99:0,11,780	0/1:18,0:18:23.02:23,0,1098	0/1:27,0:23:10.34:10,0,1930	0/1:17,0:16:13.31:13,0,1323	1/1:6,13:19:14.13:1220,14,0	0/1:19,0:17:37.56:38,0,2112	0/0:13,0:13:1.72:0,2,1409	0/1:19,0:19:4.68:5,0,1160	0/0:17,0:17:9.13:0,9,1610	0/1:14,0:14:60.74:61,0,1983	0/1:29,0:28:17.70:18,0,3097	0/0:24,0:24:10.71:0,11,1859	0/1:20,0:20:12.82:13,0,860	0/1:20,0:20:24.51:25,0,1225	0/0:8,0:8:23.64:0,24,842	0/0:15,0:15:22.37:0,22,1370	0/1:33,0:31:23.23:23,0,2289	0/0:19,0:19:20.28:0,20,347	0/0:18,0:17:17.46:0,17,405	0/0:25,0:25:23.48:0,23,520	0/0:9,0:9:3.48:0,3,238	0/0:15,0:14:26.67:0,27,1449	0/0:10,0:10:22.63:0,23,1373	0/0:6,0:6:15.02:0,15,575
chr10	62199528	.	G	GCT	696.16	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-2.196;DP=552;FS=1.096;HRun=0;HaplotypeScore=69.6862;InbreedingCoeff=0.9037;MQ=84.95;MQ0=0;MQRankSum=-2.183;QD=43.51;ReadPosRankSum=0.859;VQSLOD=4.6521;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:37:99:0,99,1611	0/0:5,0:5:15.04:0,15,221	0/0:21,0:21:63.13:0,63,954	0/0:21,0:21:56.63:0,57,849	0/0:12,0:12:36.12:0,36,587	0/0:11,0:11:30.10:0,30,489	0/0:41,0:41:99:0,120,1944	0/0:22,0:22:60.16:0,60,950	1/1:1,15:16:39.13:791,39,0	0/0:25,0:25:72.23:0,72,1130	0/0:8,0:8:21.07:0,21,343	0/0:26,0:26:72.21:0,72,1108	0/0:20,0:20:57.18:0,57,899	0/0:25,0:25:69.24:0,69,1106	0/0:29,0:29:81.26:0,81,1295	0/0:23,0:23:66.23:0,66,1075	0/0:35,0:35:96.33:0,96,1555	0/0:30,0:30:81.26:0,81,1296	0/0:10,0:10:30.06:0,30,459	0/0:6,0:6:15.05:0,15,245	0/0:27,0:27:72.19:0,72,1088	0/0:4,0:4:12.04:0,12,196	0/0:6,0:6:18.06:0,18,283	0/0:25,0:25:66.17:0,66,1024	0/0:15,0:15:45.13:0,45,700	0/0:22,0:22:66.22:0,66,1055	0/0:25,0:25:72.23:0,72,1142	0/0:4,0:4:12.04:0,12,196
chr10	62199618	.	A	AC	330.09	PASS	AC=2;AF=0.037;AN=54;BaseQRankSum=-3.171;DP=598;FS=4.344;HRun=1;HaplotypeScore=62.5769;InbreedingCoeff=0.8306;MQ=81.41;MQ0=0;MQRankSum=-1.813;QD=27.51;ReadPosRankSum=1.101;VQSLOD=3.4513;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:48:99:0,138,1787	0/0:4,0:4:12.04:0,12,158	0/0:16,0:16:42.13:0,42,526	0/0:29,0:28:78.20:0,78,952	0/0:8,0:8:24.08:0,24,310	0/0:14,0:14:39.13:0,39,506	0/0:33,0:33:96.31:0,96,1246	0/0:30,0:30:84.27:0,84,1080	1/1:2,10:12:30.06:424,30,0	0/0:12,0:12:36.11:0,36,456	0/0:4,0:4:9.03:0,9,117	0/0:28,0:28:78.24:0,78,998	0/0:23,0:23:60.19:0,60,779	0/0:24,0:24:69.22:0,69,895	0/0:28,0:28:81.26:0,81,1048	0/0:28,1:29:36.30:0,36,953	0/0:46,0:46:99:0,105,1362	0/0:33,0:33:99:0,99,1284	0/0:17,0:17:48.14:0,48,601	0/0:9,0:9:27.07:0,27,336	0/0:54,0:54:99:0,159,2048	0/0:2,0:2:6.01:0,6,64	0/0:8,0:8:21.07:0,21,272	0/0:34,0:34:99:0,102,1309	0/0:13,0:12:39.13:0,39,506	0/0:20,0:20:57.15:0,57,712	0/0:19,0:18:54.16:0,54,683	./.
chr10	62199667	.	AGAGG	A	1850.95	PASS	AB=1.000;AC=7;AF=0.130;AN=54;BaseQRankSum=1.089;DP=491;FS=7.376;HRun=0;HaplotypeScore=113.4136;InbreedingCoeff=0.7059;MQ=68.63;MQ0=20;MQRankSum=-0.032;QD=22.04;ReadPosRankSum=-0.637;VQSLOD=2.9378;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:35:47.49:0,47,911	1/1:1,1:2:6.02:101,6,0	0/0:24,0:15:16.18:0,16,530	0/0:41,0:32:52.51:0,53,831	0/0:6,0:6:5.90:0,6,125	0/0:14,0:13:24.01:0,24,538	0/0:31,0:30:50.92:0,51,1032	1/1:6,24:30:72.15:1094,72,0	0/1:11,0:10:1.81:2,0,227	0/0:16,0:14:35.79:0,36,617	0/0:7,0:7:13.60:0,14,259	0/0:20,0:20:34.89:0,35,642	0/0:12,0:11:20.90:0,21,352	0/0:15,0:15:17.55:0,18,354	0/0:20,0:18:30.07:0,30,575	0/0:22,0:19:36.01:0,36,621	1/1:10,31:41:48.15:787,48,0	0/0:19,0:19:24.08:0,24,497	0/0:8,0:8:21.07:0,21,503	0/0:1,0:1:1.25:0,1,3	0/0:25,0:22:35.77:0,36,815	0/0:7,0:7:14.85:0,15,358	0/0:6,0:6:12.04:0,12,301	0/0:30,0:30:63.22:0,63,1562	0/0:6,0:4:4.24:0,4,28	0/0:21,0:20:6.36:0,6,796	0/0:18,0:12:23.93:0,24,437	./.
chr10	62199682	.	GGC	G	1858.66	PASS	AB=0.961;AC=19;AF=0.339;AN=56;BaseQRankSum=6.162;DP=538;FS=27.050;HRun=0;HaplotypeScore=101.7030;InbreedingCoeff=0.0245;MQ=54.86;MQ0=30;MQRankSum=-4.056;QD=7.15;ReadPosRankSum=-3.323;VQSLOD=1.1442;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:29:23.80:0,24,489	1/1:2,0:2:5.95:51,6,0	0/0:44,0:11:25.62:0,26,432	0/0:68,1:24:20.97:0,21,547	0/0:6,0:5:5.90:0,6,75	0/0:14,0:12:21.07:0,21,356	0/1:25,2:27:99:160,0,514	0/1:33,0:31:99:444,0,201	0/1:8,2:9:17.91:18,0,139	0/1:23,2:22:99:377,0,276	0/0:9,0:9:12:0,12,167	0/0:19,0:19:12.33:0,12,339	0/1:12,0:11:44.81:45,0,129	0/1:12,0:13:18.25:18,0,195	0/1:18,0:16:99:126,0,294	0/0:19,0:15:27.95:0,28,356	0/1:35,0:35:54.71:67,0,55	0/0:17,0:17:21.27:0,21,282	0/0:11,0:10:11.57:0,12,322	1/1:4,0:4:10.89:110,11,0	0/1:28,0:25:99:135,0,501	0/0:6,0:6:14.84:0,15,218	0/0:6,1:7:15.05:0,15,221	0/0:25,0:23:66.21:0,66,941	1/1:11,1:10:9.43:93,9,0	0/1:18,3:20:99:240,0,524	0/1:18,0:13:99:102,0,128	1/1:0,1:1:3.01:45,3,0
chr10	62199684	.	C	CAGAGAGAGAGAG	8956.60	PASS	AB=0.571;AC=37;AF=0.685;AN=54;BaseQRankSum=-5.428;DP=598;FS=25.315;HRun=0;HaplotypeScore=158.9305;InbreedingCoeff=0.7048;MQ=52.59;MQ0=31;MQRankSum=-4.551;QD=25.66;ReadPosRankSum=-5.222;VQSLOD=1.0023;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:37:9.64:200,10,0	0/0:1,0:2:2.98:0,3,22	0/0:51,0:10:2.04:0,2,6	0/0:73,0:23:2.06:0,2,33	0/1:2,0:7:0:0,0,0	1/1:10,4:19:3.01:176,3,0	1/1:27,0:26:37.66:784,38,0	0/0:32,0:31:13.81:0,14,357	1/1:11,0:10:12.04:387,12,0	1/1:25,0:22:51.18:1285,51,0	./.	1/1:7,14:24:11.40:871,11,0	1/1:12,0:11:21.07:575,21,0	1/1:5,6:17:6.02:248,6,0	1/1:18,0:17:21.07:628,21,0	1/1:11,8:18:3.01:176,3,0	0/0:33,0:35:54.08:0,54,1226	1/1:4,10:17:12.04:579,12,0	1/1:8,0:16:21.94:496,22,0	1/1:6,0:6:12.47:273,12,0	1/1:28,0:25:18.06:381,18,0	0/0:4,0:7:12.01:0,12,265	0/0:8,0:9:0.30:0,0,173	0/0:10,0:24:32.42:0,32,681	1/1:11,0:9:12.04:330,12,0	1/1:23,0:22:36.11:621,36,0	1/1:17,0:13:30.10:782,30,0	1/1:3,0:3:9.03:166,9,0
chr10	62199990	.	CT	C	3938.32	PASS	AB=0.716;AC=42;AF=0.778;AN=54;BaseQRankSum=4.182;DP=418;FS=9.688;HRun=13;HaplotypeScore=46.3008;InbreedingCoeff=0.3377;MQ=62.37;MQ0=6;MQRankSum=-1.221;QD=10.36;ReadPosRankSum=1.461;VQSLOD=2.0318;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:21,5:24:33.63:34,0,335	1/1:0,2:2:2.98:22,3,0	1/1:10,0:5:1.99:6,2,0	0/0:11,1:11:11.49:0,11,79	0/0:13,1:13:8.13:0,8,234	0/1:2,8:11:6.25:114,0,6	1/1:5,16:20:19.42:317,19,0	1/1:11,14:27:40.44:269,40,0	0/0:10,0:10:0.62:0,1,155	0/1:5,6:13:7.07:80,0,7	1/1:3,6:10:13.23:92,13,0	1/1:2,5:7:14.91:109,15,0	1/1:5,3:11:18.02:105,18,0	1/1:3,7:10:8.93:66,9,0	1/1:1,13:13:32.81:241,33,0	1/1:1,18:19:41.76:306,42,0	1/1:6,27:38:52.60:504,53,0	1/1:6,22:30:63.67:449,64,0	1/1:6,19:24:3.19:312,3,0	1/1:1,2:3:5.96:44,6,0	1/1:4,15:23:41.86:301,42,0	./.	0/0:2,0:2:3:0,3,29	0/1:29,6:35:37.48:37,0,469	1/1:4,8:12:20.83:149,21,0	1/1:4,13:19:39.80:272,40,0	1/1:3,6:9:11.89:88,12,0	1/1:1,2:3:2.98:22,3,0
chr10	62202664	.	TACAC	T	2458.15	PASS	AB=0.812;AC=34;AF=0.654;AN=52;BaseQRankSum=-3.212;DP=630;FS=6.568;HRun=0;HaplotypeScore=118.6754;InbreedingCoeff=0.5020;MQ=66.97;MQ0=23;MQRankSum=-0.877;QD=6.21;ReadPosRankSum=0.334;VQSLOD=2.1261;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:33:14.83:0,15,261	0/0:11,0:11:8.38:0,8,84	./.	./.	0/0:17,0:22:16.60:0,17,240	1/1:13,1:18:12.03:149,12,0	1/1:15,5:19:4.76:54,5,0	0/0:33,0:30:3.47:0,3,27	0/0:17,0:17:0.21:0,0,224	1/1:18,0:22:18.03:204,18,0	1/1:9,8:18:6.80:92,7,0	1/1:14,4:17:9.03:136,9,0	1/1:10,7:17:5.53:74,6,0	0/1:8,7:16:0.45:120,0,0	1/1:11,0:11:12.02:140,12,0	1/1:13,8:21:14.54:196,15,0	0/0:32,0:31:23.53:0,24,334	1/1:8,8:16:18.05:243,18,0	1/1:20,0:19:14.96:170,15,0	0/1:12,0:12:29.89:57,0,30	1/1:24,16:40:8.24:101,8,0	0/0:8,0:17:16.31:0,16,72	0/1:15,1:18:38.04:72,0,38	0/1:24,1:39:75.95:76,0,168	1/1:16,0:14:9.02:109,9,0	1/1:26,2:26:18.42:307,18,0	1/1:17,5:22:11.73:128,12,0	1/1:13,7:18:17.53:205,18,0
chr10	62202703	.	A	ACAC	866.75	PASS	AB=0.805;AC=8;AF=0.143;AN=56;BaseQRankSum=4.836;DP=645;FS=18.585;HRun=0;HaplotypeScore=120.1460;InbreedingCoeff=0.1893;MQ=53.54;MQ0=35;MQRankSum=-0.832;QD=4.59;ReadPosRankSum=-3.206;VQSLOD=0.4764;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:31,0:30:29.25:29,0,341	0/1:5,4:10:0.34:63,0,0	0/0:36,0:9:24.07:0,24,293	0/0:30,0:11:23.88:0,24,266	0/0:18,0:17:6.27:0,6,228	0/0:15,0:15:30.03:0,30,322	0/0:18,0:17:27.98:0,28,335	1/1:24,0:20:29.68:435,30,0	0/1:8,1:19:61.88:62,0,155	0/0:20,0:20:18.84:0,19,442	0/0:16,0:16:2.05:0,2,129	0/0:16,0:16:19.76:0,20,315	0/0:19,0:18:32.15:0,32,410	0/0:20,0:20:25.21:0,25,322	0/0:14,0:15:25.01:0,25,344	0/0:16,0:16:24.11:0,24,269	0/1:10,30:41:10.17:386,0,10	0/0:28,0:26:54.11:0,54,623	0/0:16,0:16:24.27:0,24,254	0/0:15,0:14:18.58:0,19,314	0/0:56,0:55:72.45:0,72,931	0/1:16,0:16:0.14:0,0,272	0/0:20,0:21:24.87:0,25,339	0/1:41,0:42:24.61:25,0,717	0/0:10,0:9:0.90:0,1,112	0/0:22,0:23:28.96:0,29,554	0/0:13,0:13:2.13:0,2,115	0/0:21,0:17:16.56:0,17,288
chr10	62202931	.	C	CT	1887.32	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-8.644;DP=711;FS=4.732;HRun=7;HaplotypeScore=67.9581;InbreedingCoeff=0.9927;MQ=71.31;MQ0=0;MQRankSum=-3.037;QD=27.35;ReadPosRankSum=0.203;VQSLOD=4.3850;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,38:44:99:1232,102,0	0/0:13,0:13:33.05:0,33,319	0/0:18,0:19:34.80:0,35,391	0/0:16,0:16:15.76:0,16,307	1/1:3,22:25:66.16:777,66,0	0/0:28,0:28:78.10:0,78,746	0/0:16,0:16:33.04:0,33,319	0/0:35,0:35:93.14:0,93,898	0/0:30,0:30:75.11:0,75,723	0/0:33,0:33:84.12:0,84,806	0/0:28,0:28:81.10:0,81,773	0/0:27,0:27:69.10:0,69,666	0/0:21,0:21:60.10:0,60,579	0/0:18,0:19:53.10:0,53,492	0/0:30,0:30:81.13:0,81,782	0/0:26,0:26:69.10:0,69,666	0/0:34,0:34:87.07:0,87,824	0/0:32,0:32:69.09:0,69,666	0/0:15,0:15:44.10:0,44,412	0/0:19,0:19:51.08:0,51,492	0/0:28,0:28:75.10:0,75,718	0/0:28,0:28:78.12:0,78,753	0/0:25,0:25:72.10:0,72,689	0/0:27,0:27:72.09:0,72,688	0/0:15,0:15:45.07:0,45,434	0/0:31,0:31:81.12:0,81,782	0/0:31,0:31:84.13:0,84,811	0/0:15,0:15:42.07:0,42,406
chr10	62208059	.	G	GGAT	14730.27	PASS	AB=0.621;AC=39;AF=0.696;AN=56;BaseQRankSum=-12.291;DP=763;FS=1.249;HRun=0;HaplotypeScore=101.1174;InbreedingCoeff=0.7297;MQ=62.97;MQ0=3;MQRankSum=0.895;QD=27.38;ReadPosRankSum=3.283;VQSLOD=4.6086;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:49:85.38:0,85,1149	1/1:4,0:10:9.03:118,9,0	0/0:35,0:22:26.36:0,26,348	0/0:30,0:26:36.02:0,36,426	0/0:28,0:28:51.15:0,51,679	1/1:6,22:28:42.14:796,42,0	1/1:13,23:36:51.18:1004,51,0	1/1:29,0:28:24.01:336,24,0	1/1:5,22:28:42.14:827,42,0	1/1:12,19:31:22.17:1125,22,0	1/1:6,13:19:33.11:553,33,0	0/1:21,19:41:71.96:776,0,72	0/1:8,20:28:18.86:1052,0,19	0/1:6,9:17:16.96:387,0,17	1/1:8,25:34:54.19:1063,54,0	1/1:11,22:37:57.20:1122,57,0	1/1:12,0:19:12.04:157,12,0	1/1:9,14:24:24.08:472,24,0	1/1:14,6:20:21.03:359,21,0	1/1:8,9:17:30.10:570,30,0	1/1:9,17:26:36.12:704,36,0	0/0:27,0:27:60.19:0,60,805	0/0:22,0:22:51.13:0,51,647	0/0:34,0:34:66.22:0,66,902	1/1:7,18:24:39.13:768,39,0	1/1:11,24:36:72.25:1405,72,0	1/1:8,15:24:48.16:922,48,0	1/1:4,3:8:12.04:215,12,0
chr10	62209189	.	GT	G	1912.85	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=5.424;DP=594;FS=0.000;HRun=4;HaplotypeScore=62.4941;InbreedingCoeff=0.9910;MQ=72.00;MQ0=0;MQRankSum=-1.501;QD=27.72;ReadPosRankSum=-1.212;VQSLOD=2.3336;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:42.13:0,42,569	1/1:1,6:7:18.06:216,18,0	0/0:22,0:19:48.99:0,49,632	0/0:30,0:28:69.23:0,69,935	0/0:28,0:28:75.09:0,75,1046	0/0:22,0:22:63.20:0,63,852	0/0:19,0:19:51.17:0,51,711	1/1:2,27:29:75.22:887,75,0	0/0:16,0:16:45.15:0,45,627	0/0:28,0:28:78.25:0,78,1062	0/0:13,0:13:39.13:0,39,546	0/0:17,0:17:48.16:0,48,672	0/0:30,0:30:87.28:0,87,1198	0/0:14,0:14:36.12:0,36,496	0/0:29,0:29:84.24:0,84,1153	0/0:21,0:21:45.14:0,45,613	1/1:3,30:33:64.28:952,64,0	0/0:21,0:21:60.12:0,60,782	0/0:21,0:21:63.19:0,63,847	0/0:24,0:24:69.21:0,69,930	0/0:26,0:26:71.05:0,71,963	0/0:5,0:5:15.04:0,15,193	0/0:9,0:9:27.09:0,27,378	0/0:22,0:22:63.21:0,63,874	0/0:24,0:23:66.20:0,66,894	0/0:28,0:27:75.25:0,75,1045	0/0:21,0:21:60.20:0,60,840	0/0:15,0:15:45.15:0,45,630
chr10	62209199	.	C	CA	1477.20	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-6.313;DP=566;FS=1.937;HRun=5;HaplotypeScore=62.6350;InbreedingCoeff=0.9758;MQ=75.56;MQ0=0;MQRankSum=-2.268;QD=30.78;ReadPosRankSum=1.068;VQSLOD=4.2992;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,18:20:45.15:592,45,0	0/0:5,0:5:15.04:0,15,161	0/0:21,0:20:39.15:0,39,469	0/0:29,0:27:39.83:0,40,548	1/1:0,28:28:78.21:1007,78,0	0/0:22,0:22:63.16:0,63,677	0/0:20,0:20:51.11:0,51,540	0/0:27,0:27:69.17:0,69,742	0/0:15,0:15:42.11:0,42,451	0/0:25,0:25:66.16:0,66,709	0/0:14,0:14:33.08:0,33,355	0/0:14,0:14:36.09:0,36,387	0/0:28,0:28:78.17:0,78,828	0/0:13,0:13:39.10:0,39,419	0/0:29,0:29:81.20:0,81,870	0/0:16,0:16:42.09:0,42,442	0/0:28,0:28:72.15:0,72,763	0/0:18,0:18:54.12:0,54,571	0/0:18,0:18:51.13:0,51,548	0/0:23,0:23:57.14:0,57,611	0/0:27,0:27:72.16:0,72,765	0/0:4,0:4:12.03:0,12,129	0/0:11,0:11:30.08:0,30,323	0/0:25,0:25:66.17:0,66,709	0/0:23,0:22:60.15:0,60,645	0/0:25,0:24:63.15:0,63,672	0/0:22,0:22:63.16:0,63,677	0/0:15,0:15:45.11:0,45,483
chr10	62214017	.	T	TA	3750.29	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-8.307;DP=605;FS=5.353;HRun=3;HaplotypeScore=76.0644;InbreedingCoeff=0.9885;MQ=72.94;MQ0=0;MQRankSum=0.684;QD=39.48;ReadPosRankSum=-0.757;VQSLOD=3.1736;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:75.24:0,75,1017	1/1:0,8:8:24.08:359,24,0	0/0:12,0:12:33.11:0,33,459	0/0:11,0:7:11.23:0,11,195	0/0:23,0:23:69.22:0,69,947	0/0:30,0:30:90.28:0,90,1216	0/0:16,0:16:42.12:0,42,556	1/1:1,40:41:99:1645,120,0	1/1:0,22:22:60.20:893,60,0	0/0:19,0:19:57.18:0,57,769	0/0:29,0:29:87.28:0,87,1191	0/0:23,0:23:69.22:0,69,949	0/0:20,0:20:60.18:0,60,806	0/0:8,0:8:24.08:0,24,335	0/0:26,0:26:75.24:0,75,1030	0/0:25,0:25:75.24:0,75,1033	1/1:1,23:24:57.19:853,57,0	0/0:19,0:19:54.17:0,54,736	0/0:21,0:21:60.17:0,60,780	0/0:28,0:28:84.27:0,84,1156	0/0:19,0:19:57.19:0,57,790	0/0:27,0:27:78.25:0,78,1066	0/0:16,0:16:48.16:0,48,670	0/0:12,0:12:36.10:0,36,471	0/0:25,0:25:75.23:0,75,1016	0/0:33,0:33:93.28:0,93,1226	0/0:32,0:32:93.28:0,93,1260	0/0:11,0:11:33.05:0,33,413
chr10	62219008	.	GC	G	1308.66	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=6.189;DP=459;FS=0.651;HRun=3;HaplotypeScore=46.7976;InbreedingCoeff=0.9576;MQ=87.11;MQ0=0;MQRankSum=-2.198;QD=31.92;ReadPosRankSum=-1.327;VQSLOD=2.8350;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:69.20:0,69,971	1/1:0,6:6:18.06:223,18,0	0/0:15,0:15:45.15:0,45,637	0/0:21,0:20:56.21:0,56,700	0/0:19,0:19:51.11:0,51,690	0/0:18,0:18:54.16:0,54,742	0/0:26,0:26:72.24:0,72,1036	1/1:0,20:20:60.19:744,60,0	0/0:10,0:9:27.09:0,27,388	0/0:24,0:24:69.21:0,69,958	0/0:3,0:3:6.02:0,6,86	0/0:7,0:7:21.07:0,21,302	0/0:14,0:14:42.14:0,42,604	0/0:14,0:14:42.14:0,42,596	0/0:24,0:24:72.23:0,72,1014	0/0:13,0:13:36.12:0,36,514	1/1:0,15:15:39.12:483,39,0	0/0:19,0:18:51.17:0,51,734	0/0:25,0:25:75.21:0,75,1029	0/0:7,0:7:21.07:0,21,302	0/0:17,0:17:48.13:0,48,669	0/0:11,0:11:33.11:0,33,475	0/0:13,0:13:39.12:0,39,534	0/0:20,0:20:54.11:0,54,735	0/0:15,0:15:45.15:0,45,647	0/0:26,0:26:78.24:0,78,1087	0/0:17,0:17:51.17:0,51,728	0/0:14,0:14:42.12:0,42,576
chr10	62221091	.	CA	C	1283.48	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=6.280;DP=652;FS=0.000;HRun=9;HaplotypeScore=69.3214;InbreedingCoeff=0.9917;MQ=59.38;MQ0=6;MQRankSum=0.550;QD=18.34;ReadPosRankSum=-1.442;VQSLOD=3.2575;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:30:72.18:0,72,817	1/1:2,7:9:21.01:192,21,0	0/0:15,0:13:15.12:0,15,342	0/0:16,0:14:31.28:0,31,324	0/0:27,0:26:72.21:0,72,831	0/0:32,0:31:77.93:0,78,887	0/0:18,0:18:45.13:0,45,519	1/1:10,22:32:68.63:602,69,0	0/0:2,0:16:40.10:0,40,223	0/0:30,0:29:83.76:0,84,904	0/0:21,0:19:51.15:0,51,589	0/0:29,0:29:78.22:0,78,890	0/0:22,0:22:48.10:0,48,539	0/0:22,0:22:63.13:0,63,702	0/0:27,0:27:57.17:0,57,658	0/0:23,0:22:63.18:0,63,717	1/1:2,27:27:69.04:631,69,0	0/0:31,2:32:23.30:0,23,776	0/0:21,0:20:57.12:0,57,634	0/0:29,0:29:66.19:0,66,759	0/0:13,0:12:33.10:0,33,381	0/0:18,0:18:39.07:0,39,436	0/0:15,0:15:33.10:0,33,381	0/0:30,0:28:72.18:0,72,808	0/0:25,0:25:66.18:0,66,752	0/0:22,0:21:57.17:0,57,658	0/0:31,1:32:53.77:0,54,867	0/0:15,0:15:36.09:0,36,405
chr10	62221989	.	G	GT	1251.48	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=-8.820;DP=592;FS=0.000;HRun=10;HaplotypeScore=98.0767;InbreedingCoeff=0.6587;MQ=60.91;MQ0=0;MQRankSum=1.526;QD=16.91;ReadPosRankSum=1.289;VQSLOD=3.8120;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,25:30:41.53:647,42,0	0/0:6,0:6:17.98:0,18,148	0/1:9,0:6:23.02:23,0,36	0/0:7,0:6:2.99:0,3,25	1/1:7,28:35:47.55:710,48,0	0/0:24,0:25:55.96:0,56,449	0/0:14,1:15:3.99:0,4,235	0/0:22,1:24:8.96:0,9,269	0/0:19,0:21:52.97:0,53,424	0/0:27,0:28:67.95:0,68,547	0/0:22,0:22:52.93:0,53,419	0/0:18,0:18:32.70:0,33,265	0/0:18,0:18:41.92:0,42,341	0/0:36,0:36:62.86:0,63,508	0/0:24,0:24:56.92:0,57,468	0/0:28,0:29:61.93:0,62,495	0/0:19,0:19:47.92:0,48,391	0/0:10,0:11:26.01:0,26,203	0/0:28,1:29:33.94:0,34,485	0/0:25,0:25:47.84:0,48,386	0/0:18,0:18:20.89:0,21,168	0/0:12,0:12:29.96:0,30,246	0/0:13,0:13:23.92:0,24,197	0/0:9,0:9:20.96:0,21,172	0/0:24,0:25:52.94:0,53,425	0/0:32,0:32:79.04:0,79,615	0/0:31,0:31:74.84:0,75,610	0/0:19,0:18:50.94:0,51,419
chr10	62222025	.	ATGT	A	13931.47	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=8.311;DP=537;FS=4.181;HRun=0;HaplotypeScore=82.9455;InbreedingCoeff=0.9912;MQ=54.08;MQ0=0;MQRankSum=-2.113;QD=41.10;ReadPosRankSum=4.370;VQSLOD=5.5672;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:72.23:0,72,1544	0/0:4,0:3:9.03:0,9,200	0/0:15,0:11:30.09:0,30,592	0/0:14,0:12:30.09:0,30,601	0/0:29,0:28:72.25:0,72,1574	1/1:1,19:20:54.18:881,54,0	1/1:1,15:16:42.14:686,42,0	0/0:28,0:28:81.28:0,81,1795	0/0:18,0:18:54.17:0,54,1140	1/1:0,20:20:54.17:855,54,0	1/1:4,14:17:42.14:685,42,0	1/1:1,13:14:36.08:588,36,0	1/1:0,20:20:57.19:930,57,0	1/1:1,23:24:57.19:929,57,0	1/1:2,19:21:51.17:831,51,0	1/1:1,18:19:48.16:774,48,0	0/0:17,0:17:48.16:0,48,1071	1/1:0,12:12:36.08:548,36,0	1/1:0,27:27:72.20:1113,72,0	1/1:2,17:19:42.14:682,42,0	1/1:2,15:17:33.11:538,33,0	0/0:20,0:20:51.18:0,51,1136	0/0:14,0:13:30.10:0,30,635	0/0:12,0:12:27.09:0,27,601	1/1:0,19:18:48.16:783,48,0	1/1:1,25:25:72.22:1150,72,0	1/1:1,22:23:60.20:979,60,0	1/1:0,24:23:60.20:980,60,0
chr10	62222336	.	C	CCA	1305.20	PASS	AB=1.000;AC=42;AF=0.875;AN=48;BaseQRankSum=2.544;DP=95;FS=36.746;HRun=0;HaplotypeScore=50.5272;InbreedingCoeff=0.2576;MQ=63.04;MQ0=6;MQRankSum=-2.485;QD=21.40;ReadPosRankSum=1.837;VQSLOD=1.4385;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,0:1:3.01:37,3,0	./.	0/0:19,0:5:12.35:0,12,126	0/0:12,0:2:6:0,6,68	1/1:3,0:3:7.26:74,7,0	1/1:1,0:1:2.96:19,3,0	./.	1/1:1,0:1:3.01:42,3,0	1/1:3,1:4:12.04:166,12,0	1/1:6,0:6:16.67:125,17,0	1/1:3,0:3:8.83:69,9,0	1/1:1,0:1:2.90:16,3,0	1/1:1,0:1:3:28,3,0	1/1:1,0:1:1.55:4,2,0	1/1:4,0:4:6.56:81,7,0	1/1:3,0:3:7.83:54,8,0	1/1:7,0:7:15.04:171,15,0	0/1:3,0:3:17.59:62,0,18	1/1:1,2:2:6.02:80,6,0	1/1:3,0:3:8.04:66,8,0	./.	./.	1/1:1,0:1:2.60:10,3,0	0/1:2,0:2:7.55:8,0,13	1/1:1,0:1:2.98:21,3,0	1/1:3,0:3:7.57:84,8,0	1/1:5,0:5:14.35:131,14,0	1/1:4,0:3:8.79:80,9,0
chr10	62222387	.	TTTCGAGTGTTA	T	561.99	PASS	AC=6;AF=0.136;AN=44;BaseQRankSum=3.664;DP=220;FS=0.000;HRun=0;HaplotypeScore=45.7952;InbreedingCoeff=0.5052;MQ=19.98;MQ0=105;MQRankSum=1.141;QD=14.79;ReadPosRankSum=-1.073;VQSLOD=1.1878;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	0/0:9,0:4:6.02:0,6,333	0/0:8,0:4:12.04:0,12,685	0/0:7,0:2:3.01:0,3,146	1/1:7,6:9:11.96:253,12,0	1/1:6,4:5:9.03:318,9,0	0/0:10,0:8:24.04:0,24,1046	0/0:3,0:2:3.01:0,3,170	0/0:10,0:8:24.08:0,24,1369	0/0:7,0:5:12.04:0,12,684	0/0:6,0:3:6.02:0,6,342	0/0:3,0:3:6.02:0,6,302	0/0:8,0:7:18.06:0,18,1027	1/1:14,1:2:3.01:106,3,0	0/0:4,0:1:3.01:0,3,171	0/0:8,0:3:6.02:0,6,327	0/0:12,0:8:15.05:0,15,778	./.	0/0:8,0:4:12.04:0,12,654	0/0:13,0:9:18.06:0,18,875	0/0:13,0:2:3.01:0,3,171	0/0:9,0:4:9.03:0,9,392	0/0:3,0:2:3.01:0,3,171	0/0:10,0:6:18.06:0,18,933	./.
chr10	62225915	.	T	TA	707.24	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=0.849;DP=315;FS=4.792;HRun=7;HaplotypeScore=35.4386;InbreedingCoeff=0.5540;MQ=71.59;MQ0=0;MQRankSum=-1.093;QD=9.31;ReadPosRankSum=1.743;VQSLOD=0.2195;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,22:23:45.14:544,45,0	1/1:1,0:1:2.37:8,2,0	0/0:7,0:3:2.92:0,3,17	0/1:10,0:8:22.49:23,0,22	1/1:0,10:10:18.06:217,18,0	0/0:10,0:10:24.04:0,24,232	0/0:8,0:8:21.03:0,21,203	0/1:19,0:19:8.71:9,0,157	0/0:10,0:10:21:0,21,191	0/0:11,0:11:30.05:0,30,289	0/0:9,0:9:24.04:0,24,232	0/0:14,0:14:39.05:0,39,370	0/0:9,0:9:21.03:0,21,202	0/0:12,0:12:36.06:0,36,348	0/0:18,0:18:39.05:0,39,376	0/0:14,0:14:39.06:0,39,376	0/1:13,0:13:1.80:50,0,2	0/0:17,0:17:45.07:0,45,434	0/0:9,0:9:24.04:0,24,232	0/0:10,0:10:24.03:0,24,232	0/0:7,0:7:14.99:0,15,137	0/0:4,0:4:12.02:0,12,116	0/0:11,0:11:23.99:0,24,219	0/0:10,0:10:21.03:0,21,202	0/0:15,0:15:36.04:0,36,342	0/0:7,0:7:21.03:0,21,203	0/0:25,0:25:66.10:0,66,637	0/0:2,0:2:6.01:0,6,58
chr10	62225920	.	A	AT	445.60	PASS	AB=0.913;AC=9;AF=0.161;AN=56;BaseQRankSum=8.077;DP=304;FS=11.282;HRun=0;HaplotypeScore=34.8911;InbreedingCoeff=0.5127;MQ=68.90;MQ0=1;MQRankSum=-0.125;QD=6.10;ReadPosRankSum=2.769;VQSLOD=1.6854;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:23:38.97:167,39,0	1/1:1,1:2:2.99:24,3,0	0/0:8,0:3:2.97:0,3,20	0/1:9,0:6:3.71:4,0,56	0/1:10,0:10:29.55:30,0,55	0/0:9,0:9:27.08:0,27,362	0/0:8,0:8:24.07:0,24,320	0/1:11,6:17:78.49:136,0,78	0/0:8,0:8:24.07:0,24,319	0/0:11,0:11:33.10:0,33,446	0/0:10,0:10:30.08:0,30,388	0/0:14,0:14:42.12:0,42,567	0/0:7,0:7:21.07:0,21,293	0/0:12,0:12:36.12:0,36,503	0/0:15,0:15:45.13:0,45,597	0/0:13,0:13:39.13:0,39,545	1/1:1,11:12:19.25:231,19,0	0/0:16,0:16:48.15:0,48,653	0/0:9,0:9:27.07:0,27,359	0/0:11,0:11:33.08:0,33,416	0/0:7,0:6:18.04:0,18,231	0/0:4,0:4:12.04:0,12,168	0/0:12,0:12:36.08:0,36,440	0/0:10,0:10:29.98:0,30,354	0/0:14,0:14:39.11:0,39,526	0/0:8,0:8:24.07:0,24,321	0/0:23,0:23:69.21:0,69,941	0/0:2,0:2:6.02:0,6,84
chr10	62225921	.	A	AT	471.90	PASS	AB=0.909;AC=11;AF=0.196;AN=56;BaseQRankSum=9.035;DP=301;FS=6.487;HRun=0;HaplotypeScore=34.4364;InbreedingCoeff=0.5414;MQ=68.95;MQ0=1;MQRankSum=-1.259;QD=5.83;ReadPosRankSum=3.161;VQSLOD=1.8322;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:23:38.39:152,38,0	1/1:1,1:2:5.99:50,6,0	1/1:8,0:3:0.89:2,1,0	0/1:10,0:6:32.47:32,0,50	0/1:10,0:10:30.48:30,0,52	0/0:9,0:9:27.08:0,27,362	0/0:8,0:8:24.07:0,24,314	0/1:10,5:16:38.61:100,0,39	0/0:8,0:8:24.07:0,24,307	0/0:11,0:11:30.10:0,30,402	0/0:9,0:9:27.08:0,27,362	0/0:15,0:15:42.12:0,42,540	0/0:7,0:7:21.07:0,21,282	0/0:12,0:12:36.12:0,36,503	0/0:14,0:14:42.13:0,42,560	0/0:13,0:13:39.13:0,39,522	1/1:1,11:12:25.13:258,25,0	0/0:16,0:16:48.15:0,48,641	0/0:9,0:9:27.08:0,27,360	0/0:11,0:11:33.08:0,33,407	0/0:7,0:6:18.04:0,18,226	0/0:4,0:4:12.04:0,12,162	0/0:13,0:13:36.07:0,36,434	0/0:9,0:9:27.01:0,27,323	0/0:13,0:13:39.12:0,39,518	0/0:8,0:8:24.07:0,24,321	0/0:22,0:22:66.22:0,66,900	0/0:2,0:2:6.02:0,6,84
chr10	62227625	.	T	TA	1389.21	PASS	AB=0.740;AC=7;AF=0.125;AN=56;BaseQRankSum=-8.375;DP=508;FS=9.267;HRun=10;HaplotypeScore=54.5661;InbreedingCoeff=0.5121;MQ=77.85;MQ0=1;MQRankSum=2.688;QD=15.10;ReadPosRankSum=-1.614;VQSLOD=2.7424;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:40.41:0,40,314	1/1:1,13:15:14.29:330,14,0	0/0:16,0:14:20.06:0,20,132	0/0:13,0:12:14.63:0,15,102	0/0:26,0:27:73.92:0,74,595	0/0:21,0:21:53.91:0,54,440	0/0:20,0:20:53.93:0,54,442	1/1:5,27:32:81.12:828,81,0	0/0:8,0:8:23.97:0,24,197	0/0:21,2:23:16:0,16,353	0/0:21,0:21:50.93:0,51,419	0/0:19,0:19:47.88:0,48,387	0/0:18,0:18:47.89:0,48,387	0/1:6,3:9:43.06:43,0,102	0/0:19,0:19:44.93:0,45,366	0/1:16,3:19:16.04:16,0,297	0/1:6,11:17:10.18:313,0,10	0/0:5,0:5:14.98:0,15,123	0/0:10,0:11:29:0,29,227	0/0:27,0:27:50.89:0,51,416	0/0:21,2:23:24.92:0,25,405	0/0:13,0:13:30.85:0,31,248	0/0:16,0:16:44.95:0,45,369	0/0:14,0:16:40.02:0,40,307	0/0:11,0:14:34.99:0,35,274	0/0:27,0:27:70.86:0,71,559	0/0:32,0:28:89.83:0,90,731	0/0:11,0:11:20.50:0,21,172
chr10	62231596	.	TTCTCTC	T	1729.52	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=0.274;DP=543;FS=0.712;HRun=0;HaplotypeScore=130.9741;InbreedingCoeff=0.5698;MQ=63.76;MQ0=6;MQRankSum=-5.657;QD=32.03;ReadPosRankSum=0.676;VQSLOD=3.5506;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,12:19:24.04:438,24,0	0/0:1,0:8:21.07:0,21,566	0/0:23,0:13:11.93:0,12,166	0/0:33,0:17:18.51:0,19,366	1/1:6,28:34:74.21:1410,74,0	0/0:24,0:22:12:0,12,152	0/0:23,0:22:17.99:0,18,245	0/0:27,0:33:39.07:0,39,756	0/0:8,0:16:21.51:0,22,243	0/0:15,0:13:26.83:0,27,660	0/0:11,0:13:9.02:0,9,199	0/0:12,0:21:3.01:0,3,79	0/0:25,0:24:21.06:0,21,518	0/0:11,0:17:3.01:0,3,76	0/0:28,0:28:9.01:0,9,177	0/0:25,0:25:18.06:0,18,468	0/0:7,0:21:39.04:0,39,892	0/0:6,0:7:9.03:0,9,274	0/0:14,0:13:27.03:0,27,583	0/0:17,0:16:11.92:0,12,189	0/0:11,0:11:5.99:0,6,50	0/0:10,0:10:3.01:0,3,79	0/0:3,0:11:3.01:0,3,79	0/0:12,0:15:9.50:0,9,230	0/0:16,0:14:5.69:0,6,109	0/0:26,0:25:54.12:0,54,1337	0/0:25,0:23:30.04:0,30,610	0/0:9,0:9:18:0,18,382
chr10	62232512	.	G	GC	2516.85	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-3.549;DP=591;FS=6.810;HRun=2;HaplotypeScore=55.6202;InbreedingCoeff=0.9342;MQ=57.86;MQ0=6;MQRankSum=-8.995;QD=32.27;ReadPosRankSum=-3.367;VQSLOD=1.8659;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,1:37:65.26:0,65,1256	1/1:1,8:9:15.05:216,15,0	0/0:20,0:11:33.10:0,33,408	0/0:21,0:9:27.08:0,27,331	0/0:33,0:33:99:0,99,1227	0/0:23,0:22:66.21:0,66,818	0/0:10,0:10:30.09:0,30,372	1/1:3,32:34:93.30:1337,93,0	1/1:0,15:15:36.12:518,36,0	0/0:24,0:24:69.22:0,69,855	0/0:24,0:24:72.23:0,72,892	0/0:11,0:11:33.10:0,33,409	0/0:13,0:13:39.12:0,39,483	0/0:23,0:23:63.20:0,63,780	0/0:21,0:21:63.20:0,63,781	0/0:22,0:22:66.21:0,66,818	1/1:2,17:18:42.14:604,42,0	0/0:24,1:25:1.19:0,1,747	0/0:25,0:22:57.17:0,57,695	0/0:22,0:22:66.19:0,66,806	0/0:29,0:29:81.24:0,81,990	0/0:11,0:11:30.09:0,30,372	0/0:12,0:12:36.11:0,36,446	0/0:14,0:14:36.11:0,36,446	0/0:30,0:30:84.26:0,84,1042	0/0:28,0:28:81.25:0,81,1004	0/0:25,0:25:72.23:0,72,892	0/0:9,0:9:27.08:0,27,334
chr10	62236497	.	CAAA	C	5599.25	PASS	AB=0.577;AC=40;AF=0.714;AN=56;BaseQRankSum=-3.901;DP=481;FS=2.150;HRun=16;HaplotypeScore=73.5720;InbreedingCoeff=0.6852;MQ=68.77;MQ0=2;MQRankSum=-1.231;QD=15.13;ReadPosRankSum=4.963;VQSLOD=3.3577;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:17:31.07:0,31,226	1/1:1,2:4:8.96:82,9,0	0/0:14,0:10:9.01:0,9,122	0/0:10,0:8:5.88:0,6,54	0/0:10,0:25:58.01:0,58,509	1/1:1,16:17:35.97:387,36,0	1/1:3,10:14:29.92:308,30,0	1/1:10,18:32:53.23:534,53,0	0/0:5,0:13:5.29:0,5,12	1/1:9,12:21:28.33:320,28,0	1/1:8,8:16:4.60:90,5,0	1/1:3,13:16:2.47:234,2,0	1/1:4,8:13:20.76:211,21,0	1/1:2,14:16:32.59:354,33,0	1/1:7,14:22:19.24:223,19,0	1/1:2,20:23:51:533,51,0	1/1:5,13:18:19.70:224,20,0	0/1:3,10:13:19.25:173,0,19	1/1:7,9:16:26.79:268,27,0	1/1:8,17:27:8:267,8,0	1/1:5,11:18:23.86:229,24,0	0/0:1,0:11:13.06:0,13,58	0/0:8,0:18:11.73:0,12,68	0/1:3,1:10:4.64:23,0,5	1/1:6,6:12:2.74:32,3,0	1/1:7,13:20:35.87:378,36,0	1/1:6,17:24:38.83:405,39,0	1/1:3,14:17:30:323,30,0
chr10	62244148	.	G	GTTTA	1590.11	PASS	AC=6;AF=0.111;AN=54;BaseQRankSum=-7.596;DP=516;FS=16.866;HRun=0;HaplotypeScore=77.7346;InbreedingCoeff=0.9019;MQ=58.33;MQ0=0;MQRankSum=-0.189;QD=18.93;ReadPosRankSum=-1.667;VQSLOD=1.2467;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:54.01:0,54,699	1/1:2,5:7:9.03:219,9,0	0/0:11,0:6:8.87:0,9,69	./.	0/0:23,0:23:36.08:0,36,517	0/0:22,0:22:51.04:0,51,721	0/0:18,0:18:39.04:0,39,491	1/1:39,0:39:59.86:500,60,0	0/0:16,0:16:39.06:0,39,515	0/0:21,0:21:33.06:0,33,449	0/0:12,0:12:21.03:0,21,269	0/0:10,0:10:15.01:0,15,171	0/0:11,0:11:27.01:0,27,339	0/0:15,0:15:33.08:0,33,490	0/0:18,0:18:27.03:0,27,341	0/0:19,0:19:27.04:0,27,367	1/1:7,29:37:42.14:1007,42,0	0/0:25,0:25:60.11:0,60,833	0/0:22,0:21:38.97:0,39,473	0/0:24,0:24:39.80:0,40,451	0/0:14,0:14:21.04:0,21,293	0/0:4,0:4:6.01:0,6,77	0/0:10,0:10:11.94:0,12,140	0/0:23,0:23:54.02:0,54,703	0/0:17,0:17:50.84:0,51,630	0/0:31,0:31:63.07:0,63,813	0/0:22,0:22:48.07:0,48,635	0/0:8,0:8:21.04:0,21,295
chr10	62244750	.	T	TC	3029.23	PASS	AB=0.951;AC=31;AF=0.554;AN=56;BaseQRankSum=-1.947;DP=424;FS=28.410;HRun=0;HaplotypeScore=54.6702;InbreedingCoeff=-0.2516;MQ=44.51;MQ0=38;MQRankSum=5.143;QD=8.39;ReadPosRankSum=5.796;VQSLOD=1.7859;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:18:15.47:231,15,0	1/1:2,0:2:5.88:36,6,0	0/0:15,0:3:4.19:0,4,21	0/0:31,0:4:8.65:0,9,64	1/1:26,0:22:38.26:334,38,0	0/1:9,0:9:32.70:60,0,33	1/1:11,0:10:17.74:147,18,0	0/1:30,0:25:92.83:219,0,93	0/0:9,0:9:22.38:0,22,157	0/1:27,0:25:13.87:229,0,14	0/1:20,0:18:11.11:171,0,11	0/1:12,0:10:0.10:121,0,0	0/1:10,0:10:7.48:7,0,112	0/0:3,4:7:5.21:0,5,24	0/1:13,0:12:11.76:101,0,12	0/1:17,0:16:21.38:133,0,21	0/1:15,0:14:53.88:75,0,54	0/1:16,1:15:16.25:124,0,16	0/1:5,13:17:6.29:229,0,6	0/1:22,0:19:29.29:199,0,29	0/1:5,0:4:10.93:39,0,11	0/1:4,2:4:13.88:26,0,14	0/1:13,0:11:10.62:122,0,11	1/1:3,0:2:2.82:17,3,0	0/1:16,2:16:27.60:158,0,28	0/1:27,0:25:31.17:252,0,31	1/1:11,0:11:8.64:99,9,0	1/1:8,0:3:8.93:66,9,0
chr10	62244755	.	T	TC	156.88	PASS	AB=0.960;AC=13;AF=0.232;AN=56;BaseQRankSum=-6.435;DP=425;FS=39.099;HRun=0;HaplotypeScore=63.0059;InbreedingCoeff=0.0447;MQ=44.49;MQ0=45;MQRankSum=-5.997;QD=1.08;ReadPosRankSum=0.205;VQSLOD=0.0232;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:18:48.26:0,48,353	0/0:2,0:2:2.18:0,2,18	1/1:16,0:3:2.92:7,3,0	0/0:35,0:5:8.76:0,9,60	0/0:25,0:21:49.28:0,49,414	0/0:10,0:10:8.23:0,8,133	0/1:11,1:10:1.50:2,0,144	0/0:26,0:21:25.09:0,25,267	1/1:9,0:9:20.19:130,20,0	0/0:25,0:23:22.73:0,23,332	0/1:19,0:17:54.56:55,0,126	0/0:11,0:9:9.16:0,9,95	0/1:11,0:10:42.05:42,0,86	0/1:7,0:7:10.38:10,0,15	0/0:13,0:12:30.42:0,30,175	0/1:17,0:16:0.33:0,0,175	0/0:17,0:15:14.50:0,15,188	0/1:19,0:17:9.56:10,0,136	0/0:15,0:14:15.71:0,16,200	0/1:21,0:18:18.15:18,0,205	0/1:4,0:3:10.76:11,0,15	0/0:6,0:4:11.84:0,12,78	0/0:14,0:12:28.92:0,29,212	0/0:4,0:3:2.96:0,3,19	0/0:17,0:15:23.58:0,24,231	0/0:28,0:26:47.68:0,48,401	0/1:6,4:10:14.59:15,0,63	0/0:11,0:4:8.94:0,9,66
chr10	62247038	.	CT	C	3659.36	PASS	AB=0.573;AC=48;AF=0.889;AN=54;BaseQRankSum=-3.383;DP=276;FS=12.801;HRun=12;HaplotypeScore=32.0592;InbreedingCoeff=0.3552;MQ=71.40;MQ0=4;MQRankSum=-0.969;QD=14.02;ReadPosRankSum=2.161;VQSLOD=2.4552;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:6,11:17:11.59:180,0,12	1/1:1,6:7:17.93:139,18,0	0/0:8,0:7:7.55:0,8,58	0/0:7,0:6:3:0,3,28	1/1:4,8:12:20.76:155,21,0	1/1:2,9:11:26.89:209,27,0	1/1:3,4:7:8.94:70,9,0	1/1:6,15:21:40.86:305,41,0	1/1:0,3:3:8.97:70,9,0	1/1:3,5:8:14.92:116,15,0	1/1:3,5:8:14.87:111,15,0	1/1:0,5:5:8.97:70,9,0	1/1:1,11:12:17.93:139,18,0	1/1:1,2:3:5.98:46,6,0	1/1:0,7:7:11.95:93,12,0	1/1:0,4:4:8.97:70,9,0	1/1:5,23:26:53.78:418,54,0	1/1:1,15:14:35.86:279,36,0	1/1:5,16:21:47.73:363,48,0	1/1:4,5:9:11.22:92,11,0	1/1:5,0:4:5.92:41,6,0	0/1:1,5:6:12.55:93,0,13	1/1:1,3:4:8.96:70,9,0	./.	1/1:3,4:7:5.97:46,6,0	1/1:7,14:19:32.80:253,33,0	1/1:0,12:12:20.92:163,21,0	1/1:2,3:5:8.96:70,9,0
chr10	62250230	.	A	AT	5446.31	PASS	AB=0.853;AC=46;AF=0.821;AN=56;BaseQRankSum=-2.689;DP=560;FS=3.197;HRun=12;HaplotypeScore=100.9517;InbreedingCoeff=0.5911;MQ=57.79;MQ0=7;MQRankSum=-1.371;QD=11.23;ReadPosRankSum=0.348;VQSLOD=4.5608;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:13,20:33:14.61:284,15,0	1/1:3,7:9:9.01:88,9,0	0/1:42,0:16:18.24:18,0,53	0/0:34,1:15:11.44:0,11,80	1/1:10,7:17:24.04:231,24,0	1/1:3,10:13:27.04:263,27,0	1/1:6,9:15:29.98:276,30,0	1/1:6,24:30:46.83:590,47,0	1/1:13,0:16:31.27:185,31,0	1/1:4,13:17:20.70:204,21,0	1/1:8,10:18:16.27:149,16,0	1/1:11,7:18:8.97:228,9,0	1/1:8,5:14:1.90:156,2,0	1/1:2,8:11:14.86:129,15,0	1/1:4,12:16:24:223,24,0	1/1:4,15:18:10.69:202,11,0	1/1:9,18:27:1.35:290,1,0	1/1:7,12:18:27.51:263,28,0	1/1:7,12:19:9.65:248,10,0	1/1:10,12:22:8.98:233,9,0	1/1:4,11:15:18.03:175,18,0	0/0:12,0:12:5.84:0,6,44	0/0:6,0:7:8.90:0,9,66	0/0:20,0:19:29.76:0,30,219	1/1:8,14:23:29.74:247,30,0	1/1:27,11:38:15.48:409,15,0	1/1:12,8:20:23.87:226,24,0	0/1:7,5:11:3.88:128,0,4
chr10	62250478	.	G	GTT	6876.92	PASS	AB=0.796;AC=52;AF=0.929;AN=56;BaseQRankSum=-3.282;DP=377;FS=2.946;HRun=12;HaplotypeScore=52.2965;InbreedingCoeff=0.1169;MQ=69.04;MQ0=2;MQRankSum=-0.420;QD=18.24;ReadPosRankSum=1.757;VQSLOD=3.7369;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,16:25:30.09:400,30,0	1/1:0,0:2:4.99:17,5,0	0/1:10,0:10:27.45:27,0,54	0/1:10,0:8:3.46:3,0,11	1/1:5,9:15:30.09:402,30,0	1/1:1,10:13:33.10:436,33,0	0/1:3,4:8:0:114,0,0	1/1:12,0:43:56.90:335,57,0	0/1:2,0:6:9.37:9,0,20	1/1:5,20:27:66.98:808,67,0	1/1:8,15:24:47.49:567,47,0	1/1:4,2:6:3.01:42,3,0	1/1:1,7:9:9.03:126,9,0	1/1:1,4:5:12:146,12,0	1/1:5,5:11:12.03:155,12,0	1/1:4,6:9:12.03:155,12,0	1/1:2,1:25:45.43:189,45,0	1/1:5,11:17:39.08:511,39,0	1/1:13,10:23:34.77:393,35,0	1/1:2,7:10:20.97:250,21,0	1/1:2,1:4:5.51:51,6,0	1/1:2,0:3:2.50:9,2,0	1/1:2,0:1:1.55:4,2,0	1/1:1,0:4:4.99:17,5,0	1/1:1,16:19:41.06:499,41,0	1/1:5,11:16:33.11:463,33,0	1/1:3,12:16:33.07:428,33,0	1/1:2,6:11:26.57:318,27,0
chr10	62253199	.	CT	C	7049.75	PASS	AB=0.810;AC=47;AF=0.839;AN=56;BaseQRankSum=2.756;DP=472;FS=24.465;HRun=11;HaplotypeScore=52.0757;InbreedingCoeff=0.6202;MQ=73.54;MQ0=5;MQRankSum=-2.160;QD=16.17;ReadPosRankSum=2.866;VQSLOD=3.7723;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,17:19:41.95:345,42,0	1/1:0,9:9:26.97:222,27,0	0/1:21,1:15:9.96:10,0,76	0/1:19,2:14:7.70:8,0,151	1/1:5,33:38:98:784,98,0	1/1:2,15:17:38.95:320,39,0	1/1:1,9:12:19.05:135,19,0	1/1:7,22:29:65.84:532,66,0	1/1:0,13:13:26.88:213,27,0	1/1:4,15:19:44.94:369,45,0	1/1:1,17:18:44.89:364,45,0	1/1:1,13:14:35.92:290,36,0	1/1:2,7:9:14.97:123,15,0	1/1:0,7:7:14.98:123,15,0	1/1:2,12:14:29.96:246,30,0	1/1:2,15:17:41.95:345,42,0	1/1:2,16:18:38.94:320,39,0	1/1:1,9:10:23.97:197,24,0	0/1:5,17:22:7.73:341,0,8	1/1:5,18:24:49.96:400,50,0	1/1:2,10:12:23.97:197,24,0	0/0:8,0:8:18.03:0,18,184	0/0:22,0:22:54.99:0,55,563	0/0:5,0:6:8.86:0,9,78	1/1:2,17:19:38.95:320,39,0	1/1:7,19:26:60.39:477,60,0	1/1:4,17:21:32.57:270,33,0	1/1:1,4:5:11.97:99,12,0
chr10	62253550	.	A	ATT	8277.63	PASS	AB=0.929;AC=41;AF=0.732;AN=56;BaseQRankSum=-3.431;DP=622;FS=0.382;HRun=12;HaplotypeScore=89.0259;InbreedingCoeff=0.8020;MQ=69.50;MQ0=2;MQRankSum=0.769;QD=17.61;ReadPosRankSum=-2.173;VQSLOD=3.6625;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:24:25.65:0,26,375	1/1:0,0:15:28.13:113,28,0	0/0:16,0:14:6.28:0,6,113	0/0:14,0:14:2.64:0,3,62	0/1:35,0:39:39.64:40,0,629	1/1:2,24:27:53.66:709,54,0	1/1:2,15:20:40.60:489,41,0	1/1:8,0:26:11.61:97,12,0	0/0:14,0:14:36.02:0,36,333	1/1:4,18:25:60.13:730,60,0	1/1:6,19:25:62:736,62,0	1/1:4,10:15:17.55:219,18,0	1/1:6,7:13:15.01:188,15,0	1/1:6,21:28:20.34:567,20,0	1/1:2,19:21:34.36:466,34,0	1/1:4,14:18:14.24:388,14,0	1/1:7,1:34:5.90:168,6,0	1/1:0,5:5:12.04:168,12,0	1/1:11,17:29:52.03:550,52,0	1/1:2,24:32:79.83:800,80,0	1/1:9,4:14:8.52:93,9,0	0/0:22,3:26:11.36:0,11,407	0/0:29,0:30:58.34:0,58,584	0/0:24,0:25:65.72:0,66,595	1/1:4,14:20:26.57:332,27,0	1/1:4,17:22:48.86:577,49,0	1/1:6,17:24:23.55:408,24,0	1/1:5,10:15:28.77:439,29,0
chr10	62254303	.	C	CT	360.79	PASS	AB=0.854;AC=8;AF=0.143;AN=56;BaseQRankSum=-0.656;DP=444;FS=0.697;HRun=14;HaplotypeScore=64.5321;InbreedingCoeff=0.0505;MQ=73.29;MQ0=2;MQRankSum=-1.415;QD=3.14;ReadPosRankSum=-2.465;VQSLOD=-0.6077;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:42:30.62:0,31,384	0/1:4,1:6:9.83:38,0,10	0/1:16,0:12:20.65:27,0,21	0/0:12,0:10:5.89:0,6,38	0/0:17,0:22:36.41:0,36,219	0/0:15,1:17:2.22:0,2,123	0/0:11,0:11:20.60:0,21,133	0/1:17,12:28:13.21:207,0,13	0/0:4,0:10:6.09:0,6,18	0/0:15,0:16:22.54:0,23,140	0/1:12,1:13:10.10:10,0,92	0/0:16,0:16:26.45:0,26,169	0/1:13,2:15:0.21:0,0,126	0/0:8,0:8:8.85:0,9,58	0/0:20,0:21:34.99:0,35,230	0/0:9,0:9:11.75:0,12,77	1/1:4,13:18:4.65:157,5,0	0/1:12,3:16:46.32:46,0,98	0/0:15,0:17:25.53:0,26,155	0/0:16,0:16:20.57:0,21,133	0/0:9,1:10:14.44:0,14,95	0/0:7,0:7:5.88:0,6,38	0/0:12,0:12:14.66:0,15,95	0/0:14,0:14:20.54:0,21,131	0/0:8,0:8:8.74:0,9,57	0/0:30,0:32:22.09:0,22,172	0/0:20,0:22:39.46:0,39,240	0/0:4,0:4:4.99:0,5,25
chr10	62258107	.	TTTTTTGTTTTTG	T	19317.30	PASS	AB=0.769;AC=33;AF=0.589;AN=56;BaseQRankSum=10.263;DP=617;FS=2.796;HRun=0;HaplotypeScore=227.5015;InbreedingCoeff=0.8820;MQ=61.95;MQ0=0;MQRankSum=-11.086;QD=52.35;ReadPosRankSum=3.137;VQSLOD=4.7569;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:29:48.14:0,48,682	0/0:11,0:11:27.09:0,27,1479	0/0:16,0:13:18.06:0,18,683	0/0:21,0:16:9.92:0,10,291	0/0:15,0:29:63.16:0,63,947	1/1:6,19:24:45.15:1560,45,0	0/1:14,6:19:47.49:399,0,47	0/0:18,0:18:39.13:0,39,1844	0/0:18,0:18:45.15:0,45,2372	1/1:12,14:26:42.14:1457,42,0	1/1:6,14:20:42.06:1237,42,0	1/1:7,6:12:12.04:413,12,0	1/1:13,13:24:27.09:929,27,0	1/1:8,17:24:45.15:1509,45,0	1/1:5,11:15:30.10:1039,30,0	1/1:8,10:18:24.08:834,24,0	0/0:35,0:35:90.31:0,90,4833	1/1:5,6:11:15.05:508,15,0	1/1:13,10:23:33.10:1002,33,0	1/1:6,18:24:54.15:1685,54,0	1/1:11,4:15:6.02:183,6,0	0/0:25,0:25:60.21:0,60,3197	0/0:29,0:29:54.19:0,54,2978	0/0:17,0:17:42.10:0,42,2086	1/1:6,21:27:54.19:1826,54,0	1/1:13,19:32:57.15:1687,57,0	1/1:12,32:44:84.29:2842,84,0	1/1:2,2:4:6.02:206,6,0
chr10	62259006	.	TTGTGTGTGTGTGTG	T	237.55	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.244;DP=609;FS=2.552;HRun=0;HaplotypeScore=224.5327;InbreedingCoeff=0.7276;MQ=65.11;MQ0=26;MQRankSum=-2.292;QD=10.33;ReadPosRankSum=1.208;VQSLOD=2.7998;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:22:42.14:0,42,2002	0/0:10,0:10:21.04:0,21,1099	0/0:25,0:15:12.51:0,13,283	0/0:39,0:21:9.48:0,9,220	0/0:29,0:27:36.34:0,36,1507	0/0:26,0:24:37.07:0,37,2036	0/0:18,0:17:30.10:0,30,1501	0/0:30,0:29:60.18:0,60,2296	1/1:10,12:19:9.03:321,9,0	0/0:33,0:30:81.26:0,81,3469	0/0:18,0:18:36.59:0,37,2013	0/0:13,0:13:30.09:0,30,1384	0/0:12,0:12:33.11:0,33,1548	0/0:22,0:22:36.12:0,36,1987	0/0:26,0:25:42.60:0,43,2086	0/0:6,0:14:6.02:0,6,333	0/0:21,0:20:45.09:0,45,1931	0/0:19,0:16:30.08:0,30,1370	0/0:20,0:20:33.11:0,33,1667	0/0:28,0:27:63.18:0,63,3279	0/0:34,0:33:51.16:0,51,2365	0/0:13,0:13:14.55:0,15,625	0/0:21,0:19:42.14:0,42,2195	0/0:15,0:15:27.56:0,28,1391	0/0:18,0:17:29.73:0,30,1615	0/0:31,0:31:84.29:0,84,4549	0/0:18,0:16:30.57:0,31,1258	0/0:10,0:9:9.03:0,9,380
chr10	62259037	.	T	TGTGA	4100.61	PASS	AB=1.000;AC=34;AF=0.630;AN=54;BaseQRankSum=-2.716;DP=504;FS=15.422;HRun=0;HaplotypeScore=113.0185;InbreedingCoeff=-0.1426;MQ=46.01;MQ0=25;MQRankSum=0.944;QD=8.93;ReadPosRankSum=-0.366;VQSLOD=1.6241;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:26:35.98:144,0,36	0/1:8,0:8:21.39:79,0,21	./.	0/0:9,0:1:3.01:0,3,33	1/1:22,0:21:3.74:125,4,0	0/1:23,0:21:16.74:140,0,17	0/1:18,0:17:6.53:126,0,7	1/1:23,0:21:31.86:223,32,0	0/0:22,0:18:17.14:0,17,100	1/1:26,0:23:11.36:293,11,0	0/1:22,0:21:22.99:129,0,23	0/1:9,0:9:1.70:130,0,2	1/1:11,0:14:13.34:133,13,0	1/1:16,0:16:8.41:210,8,0	0/1:23,0:22:47.53:125,0,48	1/1:14,0:14:8.76:59,9,0	1/1:16,0:15:18.67:220,19,0	0/1:14,0:11:11.79:137,0,12	0/1:10,0:10:2.38:99,0,2	0/1:26,0:25:14.73:278,0,15	0/1:29,0:28:5.54:166,0,6	0/0:4,7:11:5.83:0,6,38	0/1:19,0:17:21.28:191,0,21	0/1:16,0:16:11.52:209,0,12	0/1:23,0:22:31.15:148,0,31	1/1:33,0:33:17.04:461,17,0	1/1:19,0:17:12.39:210,12,0	1/1:6,0:5:8.77:67,9,0
chr10	62259653	.	T	TGG	5278.10	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-13.546;DP=800;FS=0.000;HRun=0;HaplotypeScore=92.1147;InbreedingCoeff=0.9983;MQ=79.65;MQ0=0;MQRankSum=-2.771;QD=53.31;ReadPosRankSum=-0.634;VQSLOD=4.7957;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,144,2334	1/1:0,11:11:30.10:603,30,0	0/0:37,0:36:99:0,100,1553	0/0:25,0:24:25.80:0,26,679	0/0:36,0:36:99:0,108,1729	0/0:16,0:16:48.16:0,48,783	0/0:25,0:25:75.26:0,75,1222	1/1:2,27:32:90.27:1729,90,0	1/1:2,26:31:78.22:1544,78,0	0/0:47,0:47:99:0,141,2292	0/0:20,0:20:57.19:0,57,928	0/0:26,0:26:78.27:0,78,1273	0/0:47,0:47:99:0,138,2223	0/0:30,0:30:87.26:0,87,1366	0/0:30,0:30:90.31:0,90,1469	0/0:28,0:28:81.26:0,81,1298	1/1:1,24:25:69.24:1402,69,0	0/0:22,0:22:60.20:0,60,979	0/0:29,0:29:87.29:0,87,1396	0/0:26,0:26:78.27:0,78,1270	0/0:34,0:34:99:0,102,1658	0/0:23,0:23:66.13:0,66,1054	0/0:25,0:25:75.24:0,75,1197	0/0:17,0:17:51.13:0,51,803	0/0:31,0:31:93.31:0,93,1491	0/0:43,0:43:99:0,126,2055	0/0:27,0:27:78.25:0,78,1248	0/0:7,0:7:21.03:0,21,291
chr10	62261610	.	AT	A	1290.05	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=7.389;DP=567;FS=4.085;HRun=9;HaplotypeScore=57.6701;InbreedingCoeff=0.9205;MQ=69.67;MQ0=0;MQRankSum=-1.086;QD=19.85;ReadPosRankSum=0.115;VQSLOD=4.1462;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:58:99:0,144,1646	1/1:1,2:3:6:55,6,0	0/0:18,0:16:30.54:0,31,325	0/0:13,0:11:3.02:0,3,90	0/0:19,0:19:45.12:0,45,507	0/0:13,0:13:30.08:0,30,336	0/0:17,0:17:42.11:0,42,475	1/1:2,18:20:53.99:482,54,0	1/1:2,20:22:48.03:439,48,0	0/0:24,0:24:66.17:0,66,730	0/0:11,0:11:33.06:0,33,366	0/0:27,0:27:75.22:0,75,862	0/0:21,0:21:26.73:0,27,561	0/0:13,0:13:36.10:0,36,407	0/0:18,0:18:48.14:0,48,554	0/0:28,0:28:84.23:0,84,953	1/1:1,19:20:51.03:467,51,0	0/0:16,0:16:48.14:0,48,551	0/0:20,0:20:54.13:0,54,600	0/0:27,0:27:69.19:0,69,787	0/0:26,0:26:72.20:0,72,820	0/0:17,0:17:42.12:0,42,480	0/0:25,0:25:60.17:0,60,684	0/0:16,0:16:42.12:0,42,485	0/0:21,0:21:57.17:0,57,657	0/0:23,0:23:57.16:0,57,649	0/0:24,0:24:72.20:0,72,822	0/0:7,0:7:18.05:0,18,208
chr10	62266205	.	C	CT	808.18	PASS	AB=0.917;AC=5;AF=0.089;AN=56;BaseQRankSum=1.559;DP=471;FS=1.388;HRun=9;HaplotypeScore=91.8980;InbreedingCoeff=0.6286;MQ=66.72;MQ0=10;MQRankSum=-2.443;QD=15.85;ReadPosRankSum=-0.069;VQSLOD=3.7780;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,23:26:57.61:624,58,0	0/0:10,0:10:29.97:0,30,255	0/0:30,0:15:19.01:0,19,223	0/0:29,1:19:26.33:0,26,273	1/1:4,10:13:27.54:300,28,0	0/0:21,0:21:44.67:0,45,411	0/0:13,0:12:29.99:0,30,260	0/0:31,0:31:74.94:0,75,644	0/0:15,0:15:29.01:0,29,280	0/0:21,0:21:47.97:0,48,417	0/0:12,0:12:23.98:0,24,208	0/0:12,0:12:6:0,6,52	0/0:11,0:11:21.64:0,22,204	0/1:10,1:11:12.15:12,0,135	0/0:14,0:14:11.50:0,11,78	0/0:14,0:14:11.98:0,12,104	0/0:27,0:27:11.99:0,12,104	0/0:18,0:17:8.98:0,9,78	0/0:17,0:17:24.39:0,24,275	0/0:15,0:15:38.97:0,39,335	0/0:9,0:9:20.96:0,21,178	0/0:5,0:5:7.23:0,7,75	0/0:11,0:11:6.17:0,6,49	0/0:11,0:11:8.99:0,9,78	0/0:17,0:17:25.26:0,25,255	0/0:27,0:27:65.98:0,66,573	0/0:20,0:20:56.96:0,57,489	0/0:8,0:8:14.83:0,15,130
chr10	62266222	.	T	TTTTGTGTGTG	8740.21	PASS	AB=1.000;AC=48;AF=0.857;AN=56;BaseQRankSum=-2.690;DP=520;FS=7.318;HRun=0;HaplotypeScore=157.8863;InbreedingCoeff=0.0784;MQ=56.58;MQ0=27;MQRankSum=0.600;QD=17.87;ReadPosRankSum=0.315;VQSLOD=3.6157;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:30:2.06:395,2,0	0/1:8,0:8:36.57:184,0,37	0/1:29,0:9:3.33:3,0,85	0/0:31,0:16:8.07:0,8,197	0/1:21,0:20:68.49:281,0,68	1/1:26,0:25:65.65:761,66,0	1/1:14,0:13:30.46:267,30,0	1/1:31,0:28:68.38:603,68,0	0/1:16,0:16:99:200,0,144	1/1:23,0:22:59.08:547,59,0	1/1:2,0:8:20.81:222,21,0	1/1:3,9:13:6.72:190,7,0	0/1:13,0:13:32.35:185,0,32	1/1:12,0:10:16.94:260,17,0	1/1:5,14:19:12.04:517,12,0	1/1:3,5:11:5.70:182,6,0	0/1:32,0:32:38.26:38,0,89	1/1:5,13:19:6.49:201,6,0	1/1:13,0:11:26.94:319,27,0	1/1:21,0:18:32.89:402,33,0	1/1:14,0:12:27.03:393,27,0	1/1:2,0:5:6:81,6,0	1/1:16,0:15:12.15:164,12,0	1/1:4,0:12:2.63:25,3,0	1/1:16,0:17:36.34:501,36,0	1/1:29,0:26:74.23:921,74,0	1/1:22,0:20:56.69:731,57,0	1/1:12,0:10:21.39:170,21,0
chr10	62267435	.	GGTGTGTGTGTGTGTGT	G	10482.12	PASS	AB=0.842;AC=33;AF=0.589;AN=56;BaseQRankSum=6.920;DP=564;FS=23.074;HRun=0;HaplotypeScore=229.8819;InbreedingCoeff=0.7409;MQ=62.70;MQ0=18;MQRankSum=-6.384;QD=32.55;ReadPosRankSum=1.075;VQSLOD=2.6144;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:17:15.05:0,15,565	0/0:5,0:9:21.05:0,21,710	0/0:32,0:15:2.96:0,3,19	0/0:30,0:23:15.04:0,15,223	0/0:14,0:15:15.05:0,15,408	1/1:10,13:23:30.10:1261,30,0	1/1:11,1:13:6.02:195,6,0	0/0:22,0:20:24.07:0,24,627	0/0:13,0:19:21.05:0,21,446	1/1:7,10:17:27.06:886,27,0	1/1:7,11:19:3.12:932,3,0	1/1:2,5:7:12.04:466,12,0	1/1:13,10:23:18.53:757,19,0	1/1:11,9:21:21.07:902,21,0	1/1:7,15:22:33.11:1391,33,0	1/1:10,7:17:21.07:902,21,0	0/0:19,0:29:36.12:0,36,1321	0/1:13,3:16:70.11:253,0,70	1/1:14,5:18:12.41:264,12,0	1/1:11,10:21:2.92:359,3,0	1/1:26,0:25:1.25:31,1,0	0/0:12,0:17:18.06:0,18,911	0/0:18,0:25:15.05:0,15,671	0/0:14,0:23:30.06:0,30,1248	1/1:13,6:19:2.11:130,2,0	1/1:21,9:30:27.05:961,27,0	1/1:13,5:18:12.04:527,12,0	1/1:4,5:9:6.02:263,6,0
chr10	62269843	.	A	AT	1197.34	PASS	AB=1.000;AC=10;AF=0.179;AN=56;BaseQRankSum=1.294;DP=606;FS=13.073;HRun=5;HaplotypeScore=74.8564;InbreedingCoeff=0.7458;MQ=75.14;MQ0=8;MQRankSum=2.787;QD=6.40;ReadPosRankSum=-2.541;VQSLOD=-0.6139;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:18:40.94:0,41,352	1/1:1,4:5:5.85:76,6,0	0/1:60,0:25:18.43:18,0,175	0/1:55,0:20:1.97:2,0,84	0/0:28,0:28:68.68:0,69,616	0/0:16,0:16:42.03:0,42,417	0/0:16,0:16:44.99:0,45,430	1/1:8,25:33:75.61:877,76,0	1/1:2,11:12:12.02:147,12,0	0/0:31,0:31:69.16:0,69,737	0/0:25,0:25:30.85:0,31,538	0/0:21,0:20:55.60:0,56,519	0/0:10,0:10:27.01:0,27,262	0/0:16,0:16:45.08:0,45,456	0/0:19,0:19:50.35:0,50,486	0/0:16,0:16:39.04:0,39,388	1/1:2,19:21:18.06:233,18,0	0/0:15,0:14:30.03:0,30,296	0/0:23,0:23:45.91:0,46,558	0/0:28,0:28:63.41:0,63,645	0/0:8,0:8:21.03:0,21,211	0/0:7,0:7:15.02:0,15,152	0/0:4,0:4:11.22:0,11,94	0/0:13,0:13:27.06:0,27,285	0/0:24,0:23:47.73:0,48,581	0/0:26,0:26:57.94:0,58,662	0/0:40,0:40:79.57:0,80,880	0/0:14,0:14:30.23:0,30,276
chr10	62270926	.	G	GT	886.47	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-6.512;DP=658;FS=5.564;HRun=1;HaplotypeScore=59.3571;InbreedingCoeff=0.9961;MQ=75.58;MQ0=0;MQRankSum=-2.017;QD=34.09;ReadPosRankSum=1.576;VQSLOD=3.3426;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:72.21:0,72,917	0/0:10,0:10:30.08:0,30,374	0/0:15,0:15:32.89:0,33,382	0/0:10,0:9:24.03:0,24,286	0/0:39,0:39:99:0,111,1425	0/0:20,0:20:60.20:0,60,779	0/0:18,0:18:54.18:0,54,701	0/0:39,0:39:99:0,108,1378	1/1:3,23:26:66.22:981,66,0	0/0:28,0:28:84.26:0,84,1060	0/0:18,0:18:51.13:0,51,632	0/0:18,0:18:51.15:0,51,648	0/0:29,0:29:87.23:0,87,1083	0/0:28,0:28:81.26:0,81,1051	0/0:27,0:27:81.25:0,81,1037	0/0:19,0:19:57.17:0,57,725	0/0:17,0:17:51.17:0,51,661	0/0:15,0:15:45.14:0,45,571	0/0:17,0:17:51.15:0,51,647	0/0:47,0:47:99:0,135,1751	0/0:27,0:27:75.69:0,76,945	0/0:34,0:34:90.26:0,90,1139	0/0:31,0:31:90.24:0,90,1124	0/0:20,0:20:60.17:0,60,763	0/0:10,0:10:27.09:0,27,351	0/0:23,0:23:66.20:0,66,833	0/0:29,0:29:84.25:0,84,1072	0/0:20,0:20:60.20:0,60,778
chr10	62271182	.	A	AC	27645.89	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-4.830;DP=716;FS=14.565;HRun=1;HaplotypeScore=65.8343;InbreedingCoeff=0.9952;MQ=61.10;MQ0=5;MQRankSum=1.188;QD=40.84;ReadPosRankSum=3.765;VQSLOD=4.0253;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,55:55:99:2158,144,0	1/1:0,15:15:45.15:674,45,0	0/0:25,0:11:27.07:0,27,323	0/0:14,0:7:18.06:0,18,234	1/1:1,27:28:63.21:943,63,0	1/1:1,18:19:51.17:764,51,0	1/1:0,14:14:42.14:628,42,0	1/1:7,25:32:90.28:1319,90,0	1/1:1,32:34:90.30:1343,90,0	1/1:0,29:29:84.28:1258,84,0	1/1:0,20:21:60.20:888,60,0	1/1:1,27:28:69.23:1034,69,0	1/1:1,20:21:60.20:899,60,0	1/1:1,28:29:87.29:1300,87,0	1/1:0,20:20:60.20:899,60,0	1/1:0,27:27:75.25:1124,75,0	1/1:0,36:36:99:1619,108,0	1/1:1,28:29:81.27:1213,81,0	1/1:3,11:14:36.08:515,36,0	1/1:0,32:32:90.30:1348,90,0	1/1:0,30:30:87.29:1304,87,0	1/1:1,17:18:48.16:708,48,0	1/1:0,22:22:63.21:942,63,0	1/1:1,23:25:54.18:809,54,0	1/1:0,19:18:51.17:765,51,0	1/1:1,24:25:72.24:1078,72,0	1/1:2,36:38:99:1528,102,0	1/1:0,16:16:39.13:584,39,0
chr10	62271416	.	A	AAAAC	5732.53	PASS	AB=0.571;AC=17;AF=0.304;AN=56;BaseQRankSum=4.114;DP=756;FS=0.402;HRun=0;HaplotypeScore=144.7894;InbreedingCoeff=0.9110;MQ=68.22;MQ0=3;MQRankSum=-9.702;QD=23.12;ReadPosRankSum=-5.800;VQSLOD=3.1287;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:35:39.10:599,39,0	1/1:6,8:14:24.08:579,24,0	0/0:38,0:34:44.68:0,45,640	0/0:31,0:28:18.05:0,18,261	1/1:17,0:37:57.43:597,57,0	0/0:24,0:24:57.16:0,57,860	0/0:23,0:23:45.15:0,45,724	1/1:22,7:30:33.58:733,34,0	0/1:7,20:28:3.24:967,0,3	0/0:30,0:30:63.19:0,63,928	0/0:24,0:24:51.17:0,51,821	0/0:30,0:30:57.18:0,57,891	0/0:20,0:20:51.16:0,51,798	0/0:28,0:29:54.16:0,54,823	0/0:33,0:33:72.25:0,72,1154	0/0:25,0:25:51.17:0,51,821	1/1:8,11:20:33.11:790,33,0	0/0:13,0:13:2.84:0,3,297	0/0:32,0:32:51.17:0,51,800	0/0:39,0:39:87.30:0,87,1377	0/0:30,0:30:57.19:0,57,909	1/1:20,0:31:36.59:536,37,0	1/1:16,1:29:39.10:575,39,0	1/1:11,3:23:22.14:356,22,0	0/0:21,0:21:60.20:0,60,966	0/0:23,0:23:45.15:0,45,725	0/0:34,0:34:75.24:0,75,1173	0/0:9,0:9:15.05:0,15,241
chr10	62276454	.	TC	T	317	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.635;DP=630;FS=0.000;HRun=9;HaplotypeScore=60.6858;InbreedingCoeff=0.9889;MQ=85.44;MQ0=1;MQRankSum=-2.672;QD=13.78;ReadPosRankSum=3.813;VQSLOD=3.4422;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:20:54.14:0,54,603	0/0:6,0:6:18.05:0,18,208	0/0:24,0:24:47.78:0,48,504	0/0:20,0:20:29.40:0,29,292	0/0:28,0:30:77.77:0,78,837	0/0:17,0:17:45.13:0,45,519	0/0:15,0:15:42.12:0,42,485	0/0:28,0:28:54.09:0,54,575	1/1:4,19:23:45.02:412,45,0	0/0:14,0:14:36.11:0,36,416	0/0:18,0:18:42.12:0,42,485	0/0:26,0:26:69.19:0,69,787	0/0:23,0:23:63.17:0,63,716	0/0:27,0:29:71.88:0,72,789	0/0:27,0:27:66.18:0,66,752	0/0:16,0:16:45.13:0,45,519	0/0:25,0:26:72.05:0,72,810	0/0:14,0:14:39.04:0,39,421	0/0:22,0:22:54.15:0,54,614	0/0:33,0:33:90.24:0,90,1017	0/0:38,0:38:99:0,105,1194	0/0:22,0:22:66.18:0,66,750	0/0:11,0:11:33.10:0,33,381	0/0:30,0:30:84.22:0,84,957	0/0:22,0:22:60.18:0,60,692	0/0:33,0:33:81.24:0,81,935	0/0:31,0:31:81.24:0,81,935	0/0:11,0:11:24.07:0,24,277
chr10	62278925	.	TGA	T	1130.44	PASS	AB=0.906;AC=26;AF=0.481;AN=54;BaseQRankSum=3.481;DP=557;FS=9.158;HRun=0;HaplotypeScore=114.7573;InbreedingCoeff=0.4566;MQ=50.09;MQ0=60;MQRankSum=-3.273;QD=4.23;ReadPosRankSum=0.253;VQSLOD=2.0748;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:23,2:24:2.83:37,3,0	0/0:5,0:5:0:0,0,0	0/0:46,0:9:7.66:0,8,81	0/0:45,0:15:12.39:0,12,134	./.	1/1:14,1:14:14.50:130,14,0	1/1:26,0:17:14.36:87,14,0	0/0:11,0:8:17.87:0,18,140	0/0:23,0:22:24.34:0,24,174	1/1:16,0:15:30.79:220,31,0	0/1:18,1:19:5.65:45,0,6	1/1:17,0:14:13.71:80,14,0	1/1:11,2:10:13.44:62,13,0	1/1:14,1:14:13.39:89,13,0	1/1:16,1:17:0.65:77,1,0	0/1:14,3:15:12.33:105,0,12	0/0:29,0:28:10.10:0,10,273	0/1:13,2:9:4.44:10,0,4	0/1:9,2:6:11.67:25,0,12	0/0:12,2:12:5.19:0,5,34	0/0:27,1:21:3.55:0,4,10	0/0:18,0:17:30.89:0,31,259	0/0:16,0:13:4.56:0,5,115	0/0:43,0:40:34.88:0,35,465	0/1:17,2:18:1.18:94,0,1	1/1:19,0:18:10.35:163,10,0	1/1:7,4:8:11.72:77,12,0	0/1:7,0:7:7.04:7,0,22
chr10	62278945	.	CGAGCGAGA	C	2583.19	PASS	AB=0.904;AC=33;AF=0.611;AN=54;BaseQRankSum=5.507;DP=489;FS=1.969;HRun=0;HaplotypeScore=129.4118;InbreedingCoeff=0.4311;MQ=49.72;MQ0=46;MQRankSum=-3.716;QD=7.85;ReadPosRankSum=0.491;VQSLOD=2.4126;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:12,11:20:1.11:1,0,2	0/0:4,0:4:2.99:0,3,24	0/0:48,0:10:12.70:0,13,55	0/1:45,0:15:10.41:10,0,85	./.	1/1:14,0:12:18.95:160,19,0	0/1:20,0:13:45.60:97,0,46	0/0:7,0:6:14.95:0,15,162	0/1:13,0:12:28.80:149,0,29	1/1:20,0:19:14.43:448,14,0	1/1:13,0:13:6.92:48,7,0	1/1:17,0:14:14.08:194,14,0	1/1:10,1:8:15.50:273,15,0	1/1:12,0:12:9.58:138,10,0	1/1:12,0:13:6.64:68,7,0	1/1:17,0:15:16.30:306,16,0	0/0:21,0:21:27.96:0,28,448	0/1:10,0:4:7.57:14,0,8	0/1:12,0:8:25.53:73,0,26	1/1:15,0:14:6.33:50,6,0	0/1:12,0:21:0.01:0,0,0	0/0:12,0:12:8.75:0,9,512	0/0:17,0:13:11.32:0,11,160	0/0:38,0:35:60.88:0,61,1423	1/1:11,0:10:2.87:30,3,0	1/1:20,0:17:45.47:467,45,0	1/1:9,0:7:8.50:87,9,0	1/1:4,0:5:11.95:148,12,0
chr10	62278949	.	CGAGAGA	C	2177.78	PASS	AB=0.819;AC=29;AF=0.537;AN=54;BaseQRankSum=5.343;DP=483;FS=0.000;HRun=0;HaplotypeScore=126.5981;InbreedingCoeff=0.3783;MQ=50.22;MQ0=42;MQRankSum=-5.292;QD=8.16;ReadPosRankSum=1.490;VQSLOD=2.2500;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:18,1:19:3.01:0,3,36	0/0:2,0:4:1.25:0,1,4	0/0:43,0:11:5.78:0,6,59	0/0:41,0:16:2.60:0,3,11	0/0:10,1:12:0:0,0,0	1/1:9,4:12:12.51:211,13,0	0/1:16,3:15:20.17:226,0,20	0/0:12,0:11:21.51:0,22,189	1/1:8,0:10:11.90:157,12,0	1/1:14,3:19:11.07:373,11,0	0/1:8,1:10:0:0,0,0	1/1:14,2:14:8.20:94,8,0	0/1:9,0:9:58.50:65,0,59	1/1:7,3:12:9.03:135,9,0	1/1:9,4:14:3.01:42,3,0	1/1:6,5:14:6.14:380,6,0	0/1:16,0:21:0.13:0,0,188	./.	0/1:13,2:11:16.10:104,0,16	0/1:11,3:13:0.13:0,0,0	0/1:20,2:20:0.08:0,0,0	0/0:8,0:12:18.03:0,18,331	0/0:11,0:14:6.02:0,6,129	0/0:37,0:39:57.05:0,57,1192	1/1:6,3:8:2.71:38,3,0	1/1:13,4:17:16.29:417,16,0	1/1:10,0:7:2.49:45,2,0	1/1:5,0:5:3.01:46,3,0
chr10	62278987	.	GGGGAGT	G	2555.85	PASS	AC=40;AF=0.741;AN=54;BaseQRankSum=1.499;DP=413;FS=1.797;HRun=0;HaplotypeScore=128.1791;InbreedingCoeff=0.6276;MQ=50.93;MQ0=6;MQRankSum=-4.330;QD=10.31;ReadPosRankSum=2.911;VQSLOD=2.7158;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:13,2:15:5.26:39,5,0	0/0:3,0:6:6.02:0,6,93	0/0:32,0:16:9.03:0,9,184	0/0:31,0:18:15.03:0,15,276	1/1:13,1:13:1.11:58,1,0	1/1:7,6:13:6.02:116,6,0	1/1:15,5:19:4.23:78,4,0	./.	1/1:6,0:12:3.01:42,3,0	1/1:10,2:12:12.04:211,12,0	1/1:6,1:7:8.87:183,9,0	1/1:6,1:7:2.67:60,3,0	1/1:11,4:15:9.03:183,9,0	1/1:9,2:11:5.52:120,6,0	1/1:6,6:12:8.58:59,9,0	1/1:9,9:18:8.05:181,8,0	0/0:20,0:20:24.04:0,24,495	1/1:6,1:6:6.02:122,6,0	1/1:9,3:11:12.04:244,12,0	1/1:5,1:6:2.87:61,3,0	1/1:27,2:27:4.12:66,4,0	0/0:11,0:11:18.02:0,18,475	0/0:13,0:13:18.06:0,18,504	0/0:35,0:36:51.17:0,51,1552	1/1:3,6:9:5.60:118,6,0	1/1:12,6:18:21.07:426,21,0	1/1:4,4:8:15.05:304,15,0	1/1:1,2:3:3.01:61,3,0
chr10	62278994	.	GGGAGT	G	598.60	PASS	AB=0.986;AC=18;AF=0.321;AN=56;BaseQRankSum=3.924;DP=410;FS=2.157;HRun=0;HaplotypeScore=128.6453;InbreedingCoeff=-0.3273;MQ=51.92;MQ0=4;MQRankSum=-4.291;QD=3.20;ReadPosRankSum=4.898;VQSLOD=2.2762;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:20.85:0,21,212	0/0:6,0:6:12.04:0,12,284	0/0:32,0:19:50.79:0,51,826	0/0:34,0:23:59.83:0,60,928	0/1:11,0:11:6.86:7,0,159	0/1:12,0:12:26.28:26,0,126	0/1:20,0:19:4.44:4,0,209	0/0:13,0:10:24.06:0,24,278	0/1:12,0:12:68.72:69,0,86	0/1:12,0:12:39.42:39,0,260	0/1:8,0:8:56.73:57,0,89	0/1:5,1:6:13.03:13,0,97	0/1:12,0:12:42.08:42,0,253	0/1:10,1:11:30.45:30,0,126	0/0:11,2:13:21.63:0,22,190	0/1:18,0:18:43.53:44,0,222	0/0:23,0:23:52.39:0,52,1009	1/1:6,1:6:4.23:48,4,0	0/1:13,0:12:66.61:67,0,207	0/1:7,0:7:15.89:16,0,63	0/0:28,0:26:11.48:0,11,222	0/0:11,0:11:33.11:0,33,710	0/0:11,0:11:24.08:0,24,631	0/0:36,0:36:85.50:0,86,1996	0/1:9,0:9:27.24:37,0,27	0/1:17,0:17:99:136,0,153	0/1:9,0:9:50.85:104,0,51	0/1:3,0:3:18.93:19,0,30
chr10	62279018	.	GGGAGT	G	462.70	PASS	AB=0.988;AC=16;AF=0.286;AN=56;BaseQRankSum=7.727;DP=404;FS=3.004;HRun=0;HaplotypeScore=109.7697;InbreedingCoeff=-0.2575;MQ=62.73;MQ0=5;MQRankSum=-5.066;QD=2.89;ReadPosRankSum=8.579;VQSLOD=0.3851;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:12,1:13:26.86:0,27,272	0/0:6,0:6:15.05:0,15,321	0/0:22,0:15:43.31:0,43,701	0/0:31,0:29:55.10:0,55,1107	0/1:11,0:11:9.87:10,0,131	0/1:9,0:9:29.30:29,0,93	0/0:21,0:20:20.05:0,20,459	0/0:12,0:8:23.41:0,23,238	0/0:18,0:18:12.14:0,12,437	0/1:14,0:14:33.39:33,0,322	0/1:10,0:10:47.68:48,0,188	0/1:8,0:8:8.74:9,0,130	0/1:12,0:12:44.76:45,0,221	0/1:15,0:15:13.27:13,0,322	0/0:16,1:17:41.81:0,42,442	0/1:17,0:17:41.85:42,0,237	0/0:19,0:19:45.15:0,45,949	0/1:9,0:8:34.82:35,0,93	0/1:12,0:11:69.62:70,0,186	0/1:6,0:6:6.86:7,0,160	0/0:27,0:25:40.72:0,41,550	0/0:11,0:11:33.11:0,33,710	0/0:12,0:12:30.10:0,30,702	0/0:34,0:34:90.25:0,90,2057	0/1:12,0:12:19.26:19,0,225	0/1:12,1:13:99:136,0,160	0/1:9,1:10:99:99,0,117	1/1:2,0:2:3:25,3,0
chr10	62280496	.	G	GT	645.60	PASS	AB=0.884;AC=12;AF=0.214;AN=56;BaseQRankSum=-1.078;DP=571;FS=0.584;HRun=13;HaplotypeScore=64.7301;InbreedingCoeff=0.1161;MQ=61.25;MQ0=3;MQRankSum=0.167;QD=3.13;ReadPosRankSum=-0.874;VQSLOD=-0.4551;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:8,13:22:8.29:204,0,8	0/0:7,0:6:11.88:0,12,82	0/1:18,0:9:11.61:12,0,33	0/1:12,0:6:4.39:4,0,6	1/1:5,25:33:41.30:496,41,0	0/0:15,2:16:7.80:0,8,198	0/0:13,0:14:22.75:0,23,150	0/0:20,0:20:17.33:0,17,122	1/1:21,0:21:1.53:10,2,0	0/0:19,3:23:12.68:0,13,224	0/0:26,1:30:43.57:0,44,419	0/1:16,5:21:7.71:8,0,91	0/0:21,0:21:8.05:0,8,198	0/0:22,0:22:29.41:0,29,205	0/0:20,0:20:37.66:0,38,251	0/0:21,1:23:14.56:0,15,233	0/0:18,0:17:38.57:0,39,266	0/1:14,2:18:9.14:9,0,140	0/0:16,1:16:1.80:0,2,157	0/0:28,0:28:59.28:0,59,407	0/1:8,1:7:16.01:16,0,50	0/0:17,3:21:12.71:0,13,225	0/1:22,2:24:24.77:25,0,219	0/0:17,0:19:39.65:0,40,258	0/1:22,2:27:5.04:5,0,233	0/0:27,0:28:58.36:0,58,394	0/0:28,0:30:34.44:0,34,231	0/0:3,0:6:7.98:0,8,47
chr10	62280509	.	TG	T	388.12	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.562;DP=538;FS=6.702;HRun=1;HaplotypeScore=63.6939;InbreedingCoeff=0.8137;MQ=68.43;MQ0=0;MQRankSum=-2.347;QD=21.56;ReadPosRankSum=0.560;VQSLOD=3.3955;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:38.87:0,39,329	0/0:4,0:4:12.04:0,12,155	0/0:14,0:11:29.95:0,30,294	0/0:12,0:9:3.79:0,4,89	0/0:28,0:28:57.72:0,58,462	0/0:19,0:19:51.08:0,51,570	0/0:12,0:12:26.90:0,27,331	0/0:11,0:11:27.06:0,27,303	1/1:2,16:18:38.99:483,39,0	0/0:20,0:20:51.10:0,51,586	0/0:33,0:33:87.57:0,88,1004	0/0:17,0:17:35.82:0,36,354	0/0:25,0:25:47.98:0,48,519	0/0:25,0:25:48.07:0,48,527	0/0:19,0:18:49.31:0,49,546	0/0:21,1:22:20.88:0,21,622	0/0:16,0:15:42.08:0,42,518	0/0:15,0:15:23.05:0,23,346	0/0:15,0:15:42.06:0,42,465	0/0:32,0:32:86.83:0,87,959	0/0:6,0:5:12.02:0,12,140	0/0:21,0:21:54.99:0,55,620	0/0:25,0:25:63.04:0,63,673	0/0:21,0:21:53.23:0,53,590	0/0:21,0:21:57.06:0,57,623	0/0:31,1:32:86.22:0,86,977	0/0:22,0:22:45.91:0,46,504	0/0:11,0:11:26.70:0,27,225
chr10	62282480	.	G	GATT	18293.51	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-14.470;DP=539;FS=2.476;HRun=0;HaplotypeScore=65.5724;InbreedingCoeff=0.9832;MQ=81.24;MQ0=0;MQRankSum=-4.236;QD=56.46;ReadPosRankSum=3.660;VQSLOD=7.1984;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:57.19:0,57,924	0/0:6,0:6:18.06:0,18,292	0/0:22,0:22:63.17:0,63,974	0/0:16,0:16:38.74:0,39,603	0/0:19,0:19:54.18:0,54,877	1/1:2,22:24:66.14:1379,66,0	1/1:0,10:10:30.10:669,30,0	0/0:35,0:35:96.31:0,96,1523	0/0:16,0:16:45.15:0,45,730	1/1:4,14:18:48.16:1050,48,0	1/1:1,23:24:69.19:1493,69,0	1/1:2,8:10:21.07:469,21,0	1/1:1,13:14:36.12:804,36,0	1/1:1,12:13:36.12:803,36,0	1/1:2,18:20:42.07:844,42,0	1/1:3,26:28:81.28:1782,81,0	0/0:25,0:24:69.19:0,69,1065	1/1:2,15:18:39.09:824,39,0	1/1:4,19:23:57.20:1273,57,0	1/1:1,35:36:99:2071,99,0	1/1:2,17:20:51.13:1091,51,0	0/0:16,0:16:48.16:0,48,778	0/0:20,0:20:60.19:0,60,955	0/0:21,0:21:60.20:0,60,974	1/1:1,18:19:57.15:1226,57,0	1/1:4,16:20:51.17:1111,51,0	1/1:1,20:22:57.20:1270,57,0	1/1:0,4:4:6.02:134,6,0
chr10	62287502	.	C	CGTTCACCAGAAACA	35533.70	PASS	AB=0.622;AC=54;AF=0.964;AN=56;BaseQRankSum=-5.600;DP=393;FS=1.096;HRun=0;HaplotypeScore=462.4345;InbreedingCoeff=-0.0250;MQ=56.77;MQ0=0;MQRankSum=-1.298;QD=90.42;ReadPosRankSum=-0.490;VQSLOD=3.9583;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,0:13:19.88:629,20,0	1/1:0,0:10:25.33:1060,25,0	1/1:3,1:5:17.78:506,18,0	0/1:3,0:2:4.04:16,0,4	1/1:2,0:21:45.02:1538,45,0	1/1:0,0:21:42.49:2191,42,0	1/1:1,0:7:12.03:364,12,0	1/1:1,0:20:54.18:2067,54,0	1/1:0,0:14:24.85:1040,25,0	1/1:0,0:13:13.17:1169,13,0	1/1:1,0:21:46.97:2008,47,0	1/1:0,0:17:25.97:1617,26,0	1/1:1,0:23:52.54:2088,53,0	1/1:0,0:17:43.48:1809,43,0	1/1:0,0:20:43.62:2166,44,0	1/1:0,0:16:34.90:1932,35,0	0/1:1,0:9:2.79:327,0,3	1/1:1,0:10:15.05:648,15,0	1/1:0,0:12:24.53:902,25,0	1/1:0,0:28:73.42:2984,73,0	1/1:0,0:5:11.99:281,12,0	1/1:0,0:12:36.09:1251,36,0	1/1:0,0:13:19.77:1129,20,0	1/1:0,0:6:5.89:343,6,0	1/1:0,0:17:37.52:1896,38,0	1/1:0,0:14:38.56:1370,39,0	1/1:0,0:21:42.09:2020,42,0	1/1:0,0:1:3.01:183,3,0
chr10	62288179	.	CTG	C	293.84	PASS	AB=0.841;AC=2;AF=0.036;AN=56;BaseQRankSum=5.088;DP=733;FS=3.389;HRun=0;HaplotypeScore=93.2399;InbreedingCoeff=-0.0320;MQ=62.85;MQ0=12;MQRankSum=-3.646;QD=5.88;ReadPosRankSum=-2.609;VQSLOD=2.4716;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:51:99:0,141,2629	0/1:10,1:10:3.45:3,0,97	0/0:45,0:19:38.16:0,38,735	0/0:68,1:32:53.30:0,53,853	0/0:24,0:24:66.14:0,66,1177	0/0:14,0:14:39.12:0,39,719	0/0:25,0:25:66.20:0,66,1219	0/1:27,12:39:99:368,0,1394	0/0:26,0:26:69.20:0,69,1261	0/0:16,0:16:48.16:0,48,880	0/0:19,0:19:51.16:0,51,940	0/0:25,0:25:69.21:0,69,1246	0/0:22,0:22:66.23:0,66,1255	0/0:18,0:18:51.16:0,51,947	0/0:36,0:36:99:0,105,1864	0/0:18,0:18:54.17:0,54,989	0/0:18,0:18:14.77:0,15,212	0/0:12,0:12:36.12:0,36,677	0/0:29,0:29:80.31:0,80,1267	0/0:25,0:25:72.18:0,72,1331	0/0:36,0:36:99:0,102,1820	0/0:24,0:24:69.21:0,69,1216	0/0:16,0:16:42.14:0,42,809	0/0:34,0:34:87.05:0,87,1512	0/0:12,0:12:36.06:0,36,655	0/0:30,0:30:75.30:0,75,1593	0/0:30,0:30:87.24:0,87,1538	0/0:6,0:6:18.06:0,18,347
chr10	62288181	.	G	GTCTGTCTC	1068.29	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=2.658;DP=747;FS=6.407;HRun=0;HaplotypeScore=174.0053;InbreedingCoeff=0.8919;MQ=61.89;MQ0=15;MQRankSum=-7.170;QD=14.63;ReadPosRankSum=-2.951;VQSLOD=1.6189;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:55:99:0,108,2333	1/1:2,10:12:8.07:374,8,0	0/0:39,0:14:14.98:0,15,219	0/0:72,0:31:15.71:0,16,300	0/0:26,0:26:60.11:0,60,1132	0/0:14,0:14:33.11:0,33,811	0/0:26,0:26:48.10:0,48,971	1/1:39,0:39:59.91:695,60,0	0/0:26,0:26:51.16:0,51,1261	0/0:16,0:16:42.14:0,42,976	0/0:21,0:21:42.13:0,42,921	0/0:25,0:25:51.13:0,51,1159	0/0:22,0:22:60.19:0,60,1402	0/0:18,0:18:48.13:0,48,1050	0/0:35,0:35:75.26:0,75,1814	0/0:19,0:19:42.13:0,42,934	1/1:7,12:21:3.01:125,3,0	0/0:12,0:12:24.08:0,24,568	0/0:28,0:28:50.18:0,50,843	0/0:25,0:25:57.08:0,57,1151	0/0:36,0:36:63.11:0,63,1232	0/0:25,0:25:57.17:0,57,1166	0/0:18,0:18:39.11:0,39,822	0/0:33,0:33:72.15:0,72,1518	0/0:13,0:13:35.99:0,36,720	0/0:31,0:31:57.24:0,57,1461	0/0:29,0:29:69.19:0,69,1617	0/0:6,0:6:18.03:0,18,393
chr10	62288290	.	ACACACACACACACC	A	1405.82	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=5.446;DP=614;FS=0.000;HRun=0;HaplotypeScore=213.5021;InbreedingCoeff=0.8849;MQ=56.51;MQ0=21;MQRankSum=0.837;QD=22.31;ReadPosRankSum=0.118;VQSLOD=2.5833;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:35:80.10:0,80,2997	1/1:6,6:12:11.95:375,12,0	0/0:30,0:11:29.77:0,30,430	0/0:29,0:10:20.65:0,21,476	0/0:21,0:21:56.95:0,57,2683	0/0:24,0:24:50.93:0,51,1951	0/0:18,0:18:45.15:0,45,2070	1/1:9,16:24:1.25:468,1,0	0/0:22,0:22:44.79:0,45,1126	0/0:22,0:22:59.41:0,59,1753	0/0:24,0:24:46.94:0,47,2072	0/0:24,0:23:51.15:0,51,2490	0/0:12,0:11:33.11:0,33,1432	0/0:18,0:18:39.13:0,39,2228	0/0:29,0:29:66.15:0,66,2526	0/0:13,0:13:36.11:0,36,1895	1/1:8,18:25:17.35:688,17,0	0/0:20,0:19:50.91:0,51,1666	0/0:14,0:14:36.02:0,36,1255	0/0:23,0:23:62.58:0,63,1856	0/0:22,0:18:42.09:0,42,1202	0/0:26,0:26:61.08:0,61,3058	0/0:21,0:21:57.19:0,57,2759	0/0:27,0:27:75.19:0,75,2930	0/0:17,0:16:36.12:0,36,1695	0/0:24,0:24:70.73:0,71,2521	0/0:28,0:28:67.07:0,67,2850	0/0:5,0:5:12.04:0,12,758
chr10	62288683	.	G	GT	2143.31	PASS	AB=0.929;AC=13;AF=0.232;AN=56;BaseQRankSum=-7.032;DP=523;FS=0.943;HRun=11;HaplotypeScore=60.7668;InbreedingCoeff=0.8111;MQ=74.66;MQ0=1;MQRankSum=-0.498;QD=17.28;ReadPosRankSum=-2.151;VQSLOD=3.8404;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:30:78.65:0,79,580	1/1:1,13:14:18.85:373,19,0	0/0:15,0:12:4.18:0,4,52	0/0:13,0:11:5.06:0,5,31	0/0:28,0:28:65.66:0,66,507	0/0:28,0:28:83.64:0,84,642	0/0:20,0:21:40.82:0,41,305	1/1:9,25:36:79.48:749,79,0	0/0:15,0:15:31.84:0,32,291	0/0:20,0:21:40.83:0,41,307	0/0:20,0:20:44.81:0,45,348	0/0:16,0:16:32.70:0,33,253	0/0:19,0:19:32.79:0,33,249	0/1:12,1:13:6.59:7,0,136	0/0:24,0:24:50.74:0,51,392	0/0:13,0:13:35.85:0,36,279	1/1:8,18:26:7.64:441,8,0	0/0:15,0:15:32.85:0,33,255	0/0:15,0:15:26.87:0,27,209	0/0:17,0:18:35.79:0,36,261	0/0:12,0:12:32.87:0,33,255	1/1:2,11:13:12.87:311,13,0	1/1:4,8:13:26.97:260,27,0	1/1:2,7:9:18.04:183,18,0	0/0:14,2:17:7.43:0,7,231	0/0:17,1:19:7.39:0,7,228	0/0:25,0:25:65.69:0,66,503	0/0:14,0:14:11.89:0,12,93
chr10	62289200	.	T	TTG	579.07	PASS	AB=0.919;AC=10;AF=0.179;AN=56;BaseQRankSum=5.539;DP=476;FS=14.145;HRun=0;HaplotypeScore=75.8211;InbreedingCoeff=0.5906;MQ=58.44;MQ0=21;MQRankSum=0.023;QD=4.71;ReadPosRankSum=2.500;VQSLOD=1.1419;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:17:21.71:0,22,156	1/1:6,0:5:14.87:107,15,0	0/1:18,0:6:0:0,0,1	0/1:22,0:10:8.99:16,0,9	0/0:22,0:22:43.33:0,43,373	0/0:19,0:17:42.27:0,42,249	0/0:9,0:9:17.38:0,17,126	1/1:22,0:20:33.99:261,34,0	0/1:11,8:20:18.23:32,0,18	0/0:25,0:22:31.37:0,31,237	0/0:26,0:25:48.07:0,48,339	0/0:12,0:11:21.36:0,21,155	0/1:18,0:17:14.08:14,0,76	0/0:7,0:7:19.49:0,19,149	0/0:14,0:14:29.02:0,29,173	0/0:14,0:13:25.83:0,26,164	1/1:16,0:16:40.38:304,40,0	0/0:15,0:14:10.22:0,10,169	0/0:21,0:18:31.76:0,32,208	0/0:16,0:15:36.50:0,36,226	0/0:7,0:6:11.70:0,12,84	0/0:12,0:12:28.90:0,29,211	0/0:15,0:15:30.26:0,30,198	0/0:12,0:12:19.59:0,20,122	0/0:22,0:20:45.98:0,46,251	0/0:27,0:26:47.10:0,47,314	0/0:23,0:19:42.58:0,43,273	0/0:17,0:15:26.77:0,27,151
chr10	62289809	.	A	AT	1929.79	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-7.722;DP=621;FS=0.491;HRun=8;HaplotypeScore=57.3843;InbreedingCoeff=0.9892;MQ=72.31;MQ0=0;MQRankSum=-1.612;QD=26.08;ReadPosRankSum=-2.737;VQSLOD=3.2944;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,102,925	1/1:1,13:14:30.09:346,30,0	0/0:9,0:9:14.96:0,15,137	0/0:9,0:9:17.96:0,18,155	0/0:33,0:33:93.03:0,93,843	0/0:17,0:17:51.03:0,51,466	0/0:15,0:15:39:0,39,352	1/1:6,23:29:69.16:764,69,0	0/0:19,0:19:48:0,48,435	0/0:32,0:32:93.05:0,93,851	0/0:33,0:33:90.02:0,90,814	0/0:16,0:16:45.02:0,45,412	0/0:18,0:18:51.03:0,51,467	0/0:25,0:25:69.04:0,69,631	0/0:22,0:22:60.02:0,60,545	0/0:25,0:25:69.03:0,69,628	1/1:1,30:31:84.24:962,84,0	0/0:22,0:22:66.04:0,66,604	0/0:20,0:20:54:0,54,489	0/0:29,0:28:75.04:0,75,685	0/0:13,0:13:36.02:0,36,329	0/0:13,0:13:33.01:0,33,302	0/0:21,1:22:22.40:0,22,455	0/0:13,0:13:39.02:0,39,357	0/0:27,0:27:75.01:0,75,675	0/0:36,0:36:99:0,102,930	0/0:34,0:34:96.04:0,96,878	0/0:10,0:9:24.01:0,24,220
chr10	62290727	.	T	TG	17527.67	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=-3.276;DP=632;FS=1.968;HRun=2;HaplotypeScore=66.2647;InbreedingCoeff=0.9982;MQ=75.05;MQ0=0;MQRankSum=-3.682;QD=37.61;ReadPosRankSum=1.618;VQSLOD=5.5826;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,132,1624	1/1:0,12:12:33.11:475,33,0	0/0:19,0:19:51.06:0,51,600	0/0:9,0:9:27.08:0,27,331	0/0:20,0:20:57.18:0,57,707	1/1:0,24:24:69.23:994,69,0	1/1:1,13:14:39.13:562,39,0	1/1:2,35:37:99:1430,105,0	1/1:1,22:23:57.19:820,57,0	1/1:1,21:22:63.17:881,63,0	1/1:0,15:15:36.12:518,36,0	1/1:1,17:18:45.15:648,45,0	1/1:0,24:24:60.20:863,60,0	1/1:0,20:20:60.20:864,60,0	1/1:0,38:38:93.31:1338,93,0	1/1:0,24:24:66.22:951,66,0	1/1:0,19:19:48.16:690,48,0	1/1:0,19:19:48.16:691,48,0	1/1:6,16:22:48.15:666,48,0	1/1:1,16:17:45.15:648,45,0	1/1:1,41:42:99:1597,111,0	0/0:20,0:20:57.18:0,57,704	0/0:15,0:15:42.13:0,42,521	0/0:35,0:35:99:0,99,1227	1/1:0,26:26:69.23:994,69,0	1/1:1,21:22:63.21:904,63,0	1/1:3,19:22:51.17:734,51,0	1/1:0,6:6:18.06:259,18,0
chr10	62292329	.	G	GT	3095.71	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-9.220;DP=618;FS=0.453;HRun=0;HaplotypeScore=59.5751;InbreedingCoeff=0.9959;MQ=69.83;MQ0=0;MQRankSum=0.520;QD=39.69;ReadPosRankSum=-2.111;VQSLOD=3.1783;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,132,1778	1/1:0,9:9:24.08:383,24,0	0/0:11,0:11:16.38:0,16,246	0/0:16,0:16:37.25:0,37,439	0/0:32,0:32:93.29:0,93,1266	0/0:18,0:18:48.15:0,48,653	0/0:18,0:18:54.16:0,54,722	1/1:2,23:25:72.10:1053,72,0	1/1:0,18:18:45.15:718,45,0	0/0:23,0:23:69.22:0,69,948	0/0:14,0:14:39.13:0,39,545	0/0:21,0:21:63.21:0,63,880	0/0:20,0:20:60.19:0,60,820	0/0:20,0:20:60.19:0,60,816	0/0:29,0:29:84.20:0,84,1130	0/0:30,1:31:42.38:0,42,1149	1/1:1,25:26:69.24:1101,69,0	0/0:11,0:11:33.06:0,33,420	0/0:21,0:21:59.91:0,60,779	0/0:22,0:22:66.20:0,66,903	0/0:33,0:33:99:0,99,1341	0/0:18,0:18:54.15:0,54,715	0/0:25,0:25:72.18:0,72,940	0/0:28,0:28:84.28:0,84,1172	0/0:22,0:22:66.21:0,66,892	0/0:24,0:24:72.23:0,72,987	0/0:27,0:27:81.26:0,81,1106	0/0:11,0:11:30.07:0,30,383
chr10	62293827	.	ATC	A	4889.70	PASS	AB=0.908;AC=35;AF=0.625;AN=56;BaseQRankSum=-3.452;DP=674;FS=1.370;HRun=0;HaplotypeScore=106.7857;InbreedingCoeff=0.6394;MQ=64.69;MQ0=34;MQRankSum=0.077;QD=12.04;ReadPosRankSum=2.397;VQSLOD=4.7836;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:26:44.86:355,45,0	0/0:7,0:7:14.96:0,15,136	0/0:77,0:28:10.94:0,11,139	0/0:73,0:33:54.38:0,54,533	0/1:6,14:19:11.98:30,0,12	1/1:29,0:29:28.65:367,29,0	1/1:23,0:23:9.47:263,9,0	0/1:33,0:33:44.68:45,0,337	0/0:26,0:27:36.43:0,36,421	0/1:16,0:16:20.93:249,0,21	1/1:20,0:20:47.84:384,48,0	0/1:20,0:20:1.02:150,0,1	1/1:16,0:17:19.79:168,20,0	1/1:23,0:23:41.88:334,42,0	1/1:26,0:26:50.41:378,50,0	1/1:15,0:15:32.04:240,32,0	0/0:26,0:25:29.35:0,29,349	1/1:12,0:12:20.57:153,21,0	0/1:18,1:19:4.02:225,0,4	1/1:15,0:15:10.96:242,11,0	1/1:21,0:19:44.80:350,45,0	0/0:10,0:10:18:0,18,165	0/0:15,0:15:29.79:0,30,230	0/0:32,0:31:45.83:0,46,615	1/1:7,0:7:8.98:72,9,0	1/1:16,1:17:14.94:291,15,0	1/1:27,1:26:44.83:444,45,0	1/1:18,0:17:20.43:150,20,0
chr10	62293846	.	T	TCACA	461.15	PASS	AB=1.000;AC=9;AF=0.173;AN=52;BaseQRankSum=-1.613;DP=678;FS=18.469;HRun=0;HaplotypeScore=173.5694;InbreedingCoeff=0.3147;MQ=54.37;MQ0=40;MQRankSum=-2.069;QD=3.34;ReadPosRankSum=-1.532;VQSLOD=1.1274;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:33:19.72:0,20,307	0/0:10,0:10:12.04:0,12,170	./.	./.	0/0:22,0:20:9.01:0,9,104	0/0:24,0:23:9.31:0,9,81	0/0:26,0:26:2.98:0,3,46	1/1:26,0:26:0.47:1,0,0	0/1:23,0:23:11.42:11,0,25	0/0:20,0:19:2.37:0,2,8	0/0:20,0:20:3:0,3,35	0/0:24,0:23:24.53:0,25,179	0/0:18,0:18:12.81:0,13,111	0/0:27,0:27:25.28:0,25,156	0/0:22,0:22:8.87:0,9,114	0/0:17,0:17:17.47:0,17,134	0/0:29,0:28:30.09:0,30,409	0/1:17,0:16:22.29:22,0,81	0/0:17,0:17:17.14:0,17,180	0/0:23,0:23:2.91:0,3,12	0/0:30,0:24:8.72:0,9,63	1/1:10,4:17:5.98:91,6,0	0/1:19,0:19:30.77:32,0,31	1/1:33,3:34:23.36:432,23,0	0/0:10,0:10:11.70:0,12,129	0/0:24,0:24:13.06:0,13,190	0/0:25,0:23:17.88:0,18,198	0/0:10,0:9:8.83:0,9,79
chr10	62293893	.	C	CTT	13119.21	PASS	AB=0.933;AC=41;AF=0.732;AN=56;BaseQRankSum=-3.533;DP=517;FS=6.255;HRun=0;HaplotypeScore=85.8351;InbreedingCoeff=0.8883;MQ=65.32;MQ0=15;MQRankSum=0.906;QD=34.89;ReadPosRankSum=0.557;VQSLOD=7.0886;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:56.98:0,57,791	1/1:7,0:7:20.08:234,20,0	0/0:24,0:13:33.11:0,33,495	0/0:20,0:13:35.31:0,35,441	0/0:17,0:17:35.96:0,36,546	1/1:19,0:18:45.14:735,45,0	1/1:3,21:24:5.98:54,6,0	1/1:6,17:21:50.19:787,50,0	0/1:13,1:14:10.64:435,0,11	1/1:2,16:17:44.18:732,44,0	1/1:2,6:8:12.04:152,12,0	1/1:20,0:19:54.02:928,54,0	1/1:20,0:20:56.29:840,56,0	1/1:21,0:21:60.20:1013,60,0	1/1:20,1:21:57.13:862,57,0	1/1:17,0:17:51.16:867,51,0	1/1:22,0:21:57.68:628,58,0	1/1:15,1:16:36.06:588,36,0	1/1:6,15:21:60:856,60,0	1/1:0,19:22:44.99:500,45,0	1/1:19,0:15:36.12:557,36,0	0/0:17,0:17:24.04:0,24,311	0/0:18,0:18:35.94:0,36,485	0/0:20,0:19:33.60:0,34,349	1/1:15,1:16:42.10:634,42,0	1/1:2,15:17:19.75:525,20,0	1/1:24,0:23:66.13:966,66,0	1/1:6,0:5:15.04:228,15,0
chr10	62297672	.	C	CTGTG	3052.27	PASS	AB=0.686;AC=16;AF=0.286;AN=56;BaseQRankSum=3.528;DP=765;FS=5.865;HRun=0;HaplotypeScore=132.3328;InbreedingCoeff=0.6716;MQ=58.26;MQ0=13;MQRankSum=-0.973;QD=11.26;ReadPosRankSum=-1.605;VQSLOD=2.7891;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:16,6:35:29.25:612,29,0	1/1:3,8:13:20.54:339,21,0	0/1:39,0:11:5.23:5,0,7	0/0:37,0:13:11.24:0,11,70	1/1:5,3:26:29.93:518,30,0	0/0:25,0:27:43.96:0,44,934	0/0:19,0:19:30.10:0,30,471	1/1:17,17:35:53.80:750,54,0	0/1:8,0:26:15.99:101,0,16	0/0:26,0:25:43.79:0,44,682	0/0:26,0:29:59.02:0,59,915	0/0:26,0:28:44.40:0,44,906	0/0:22,0:24:40.70:0,41,659	0/0:36,0:37:96.21:0,96,1411	0/0:26,0:30:66.17:0,66,958	0/0:18,0:21:51.07:0,51,660	1/1:8,16:28:32.58:683,33,0	0/0:24,0:23:49.99:0,50,743	0/0:17,0:19:24.11:0,24,500	0/0:20,0:21:48.14:0,48,709	0/0:60,0:60:82.75:0,83,1611	0/1:6,0:20:32.38:45,0,32	1/1:3,0:12:16.47:74,16,0	0/1:8,0:33:56.44:119,0,56	0/0:16,0:18:45.08:0,45,643	0/0:33,0:35:74.07:0,74,1270	0/0:26,0:27:63.17:0,63,950	0/0:8,0:10:18.26:0,18,350
chr10	62300652	.	T	TCTATAGAGTAAGTCCAGTT	27185.17	PASS	AB=0.657;AC=54;AF=0.964;AN=56;BaseQRankSum=1.021;DP=188;FS=51.217;HRun=0;HaplotypeScore=203.6680;InbreedingCoeff=-0.0786;MQ=68.67;MQ0=0;MQRankSum=-2.844;QD=144.60;ReadPosRankSum=2.721;VQSLOD=2.8814;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,0:8:18.06:1023,18,0	1/1:2,0:2:3.01:70,3,0	0/1:2,0:6:31.11:293,0,31	0/1:3,1:5:37.06:382,0,37	1/1:3,0:3:6.02:457,6,0	1/1:10,0:10:21.07:1517,21,0	1/1:4,0:4:9.03:517,9,0	1/1:10,0:10:30.10:1452,30,0	1/1:7,0:7:18.06:1045,18,0	1/1:4,0:4:12.04:897,12,0	1/1:3,0:3:3.01:245,3,0	1/1:9,0:9:21:941,21,0	1/1:4,0:4:8.39:419,8,0	1/1:6,0:6:15.05:972,15,0	1/1:8,0:8:21.07:1329,21,0	1/1:6,0:6:18.06:1166,18,0	1/1:4,0:4:6.02:341,6,0	1/1:8,0:8:9.03:507,9,0	1/1:4,0:4:12.04:845,12,0	1/1:14,0:14:36.12:2579,36,0	1/1:3,0:3:9.03:531,9,0	1/1:11,0:11:27.09:2121,27,0	1/1:11,0:11:30.10:2179,30,0	1/1:4,0:4:9.03:740,9,0	1/1:9,0:9:18.06:1296,18,0	1/1:12,0:12:30.10:1703,30,0	1/1:10,0:10:24.08:1447,24,0	1/1:3,0:3:6.02:169,6,0
chr10	62303196	.	C	CT	8546.86	PASS	AB=1.000;AC=35;AF=0.625;AN=56;BaseQRankSum=-13.116;DP=595;FS=1.528;HRun=10;HaplotypeScore=60.2941;InbreedingCoeff=0.8563;MQ=65.39;MQ0=0;MQRankSum=2.113;QD=22.08;ReadPosRankSum=0.445;VQSLOD=5.7321;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:35:86.96:0,87,676	0/0:15,0:15:38.92:0,39,317	0/1:9,0:8:20.05:20,0,54	0/0:7,0:6:1.95:0,2,9	0/0:33,1:36:64.73:0,65,714	1/1:5,20:26:10.85:514,11,0	1/1:6,16:23:44.94:459,45,0	0/0:35,0:35:77.87:0,78,640	0/0:15,1:16:6.97:0,7,264	1/1:2,26:28:34.90:774,35,0	1/1:4,23:27:22.85:642,23,0	1/1:2,14:16:42.11:448,42,0	1/1:1,13:14:33.04:340,33,0	1/1:5,16:21:23.18:339,23,0	1/1:7,17:24:42.11:448,42,0	1/1:0,22:23:53.86:558,54,0	0/0:23,0:23:62.91:0,63,513	1/1:3,21:24:51.13:544,51,0	1/1:7,13:20:4.96:372,5,0	1/1:4,27:31:76.43:802,76,0	1/1:1,11:13:25.31:259,25,0	0/0:13,0:13:29.95:0,30,243	0/0:19,0:19:44.92:0,45,366	0/0:8,0:8:17.96:0,18,148	1/1:5,10:15:24.06:256,24,0	1/1:6,26:32:31.89:741,32,0	1/1:3,17:20:39.10:416,39,0	1/1:1,20:21:38.52:615,39,0
chr10	62303292	.	C	CA	2825.47	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-4.960;DP=716;FS=12.399;HRun=1;HaplotypeScore=62.5170;InbreedingCoeff=0.9960;MQ=54.08;MQ0=15;MQRankSum=-7.672;QD=33.64;ReadPosRankSum=-3.462;VQSLOD=1.3324;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,1:46:99:0,129,1779	1/1:1,13:14:21.07:335,21,0	0/0:36,0:11:24.08:0,24,334	0/0:22,0:6:18.03:0,18,230	0/0:38,0:37:99:0,108,1487	0/0:28,0:28:81.27:0,81,1132	0/0:27,0:26:75.25:0,75,1048	1/1:5,25:28:75.26:1190,75,0	1/1:0,20:20:51.17:813,51,0	0/0:27,0:27:75.25:0,75,1048	0/0:22,0:22:66.22:0,66,920	0/0:19,0:19:57.19:0,57,797	0/0:18,0:18:54.18:0,54,753	0/0:21,0:21:57.19:0,57,796	0/0:23,0:23:69.19:0,69,942	0/0:20,0:20:51.17:0,51,709	1/1:0,20:20:42.13:648,42,0	0/0:24,1:25:63.21:0,63,880	0/0:27,0:25:66.22:0,66,913	0/0:22,0:22:63.21:0,63,879	0/0:42,0:40:99:0,120,1674	0/0:20,0:20:60.18:0,60,805	0/0:26,0:26:78.22:0,78,1068	0/0:23,0:23:69.19:0,69,942	0/0:21,0:21:60.17:0,60,818	0/0:26,0:26:78.22:0,78,1068	0/0:28,0:28:75.25:0,75,1048	0/0:25,0:25:72.24:0,72,1000
chr10	62305956	.	C	CTG	1255.08	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-4.444;DP=585;FS=0.626;HRun=0;HaplotypeScore=78.3122;InbreedingCoeff=0.8438;MQ=68.37;MQ0=2;MQRankSum=0.910;QD=17.93;ReadPosRankSum=-1.215;VQSLOD=3.2611;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:34:84.02:0,84,954	1/1:2,6:8:11.65:194,12,0	0/0:18,1:14:4.76:0,5,56	0/0:21,0:14:4.37:0,4,76	0/0:28,0:30:65.12:0,65,674	0/0:20,0:21:56.92:0,57,639	0/0:24,0:24:54.08:0,54,626	1/1:6,20:26:51.93:616,52,0	1/1:12,0:12:9.02:100,9,0	0/0:24,0:24:63.11:0,63,715	0/0:18,0:19:35.83:0,36,357	0/0:11,0:11:27.08:0,27,330	0/0:12,0:12:22.25:0,22,230	0/0:20,0:21:50.66:0,51,518	0/0:15,0:18:44.55:0,45,437	0/0:15,0:15:42.04:0,42,468	1/1:6,18:23:2.38:486,2,0	0/0:17,0:17:38.87:0,39,385	0/0:15,0:15:30.01:0,30,314	0/0:21,0:21:47.90:0,48,466	0/0:50,0:50:99:0,111,1218	0/0:24,0:24:53.98:0,54,537	0/0:19,0:19:41.85:0,42,474	0/0:21,0:21:54.03:0,54,586	0/0:25,0:25:60.06:0,60,661	0/0:26,0:26:54.46:0,54,654	0/0:14,0:14:36.03:0,36,408	0/0:12,0:14:41.79:0,42,467
chr10	62305971	.	T	TGTGC	482.51	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=3.438;DP=558;FS=1.358;HRun=0;HaplotypeScore=99.2385;InbreedingCoeff=0.2440;MQ=63.50;MQ0=3;MQRankSum=-0.196;QD=7.42;ReadPosRankSum=-1.337;VQSLOD=2.2817;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,105,1672	0/1:8,0:8:25.45:25,0,33	0/0:17,0:11:0.94:0,1,51	0/0:18,0:12:5.09:0,5,77	0/0:28,0:28:71.46:0,71,1108	0/0:20,0:20:60.10:0,60,1022	0/0:21,0:21:60.09:0,60,1025	0/1:28,0:28:76.26:235,0,76	1/1:3,4:8:9.03:251,9,0	0/0:21,0:21:62.86:0,63,1018	0/0:13,0:13:36.02:0,36,550	0/0:11,0:11:30.09:0,30,560	0/0:11,0:11:28.18:0,28,387	0/0:21,0:21:62.82:0,63,863	0/0:16,0:16:48.06:0,48,735	0/0:15,0:15:45.05:0,45,745	0/1:21,0:20:58.59:88,0,59	0/0:17,0:17:44.87:0,45,593	0/0:16,0:16:45.04:0,45,593	0/0:23,0:24:62.93:0,63,793	0/0:52,0:51:99:0,147,2164	0/0:20,0:20:57:0,57,765	0/0:16,0:16:44.85:0,45,756	0/0:20,0:20:60.03:0,60,929	0/0:22,0:22:63.09:0,63,1040	0/0:27,0:27:77.62:0,78,1174	0/0:13,0:13:39.03:0,39,637	0/0:14,0:14:42.14:0,42,781
chr10	62306290	.	G	GA	12307.73	PASS	AB=0.563;AC=51;AF=0.911;AN=56;BaseQRankSum=-5.484;DP=517;FS=4.973;HRun=9;HaplotypeScore=46.7754;InbreedingCoeff=0.7208;MQ=60.99;MQ0=6;MQRankSum=-1.121;QD=24.76;ReadPosRankSum=2.304;VQSLOD=5.6164;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,27:27:63.17:697,63,0	1/1:0,1:1:3.01:33,3,0	0/0:10,0:6:14.96:0,15,124	0/0:10,0:6:14.99:0,15,130	1/1:3,16:18:18.90:419,19,0	1/1:5,15:20:42.11:465,42,0	1/1:3,14:17:39.06:418,39,0	1/1:7,30:37:90.16:969,90,0	1/1:2,13:15:39.11:431,39,0	1/1:5,18:23:54.15:597,54,0	1/1:6,10:16:27.07:299,27,0	1/1:3,12:14:7.04:306,7,0	1/1:2,11:14:29.91:313,30,0	0/1:4,14:18:1:433,0,1	1/1:4,18:22:48.13:531,48,0	1/1:1,11:12:33.09:365,33,0	1/1:3,32:35:64.19:936,64,0	1/1:3,12:15:30.06:321,30,0	1/1:4,19:23:31.07:553,31,0	1/1:5,12:16:7.08:306,7,0	1/1:3,16:18:45.12:498,45,0	1/1:3,15:19:47.96:512,48,0	1/1:5,20:25:54:597,54,0	1/1:2,15:17:45.12:498,45,0	1/1:6,15:21:39.11:431,39,0	1/1:3,19:21:54.11:583,54,0	1/1:2,18:20:54.15:597,54,0	1/1:2,6:8:18.05:199,18,0
chr10	62306381	.	T	TACA	2893.31	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-7.853;DP=623;FS=3.572;HRun=0;HaplotypeScore=89.5825;InbreedingCoeff=0.9685;MQ=87.37;MQ0=0;MQRankSum=-3.125;QD=57.87;ReadPosRankSum=1.635;VQSLOD=5.8661;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,20:22:60.21:1339,60,0	0/0:7,0:7:21.07:0,21,343	0/0:21,0:21:51.11:0,51,780	0/0:23,0:23:56.92:0,57,824	1/1:1,26:28:78.22:1675,78,0	0/0:24,0:24:66.23:0,66,1078	0/0:28,0:28:81.28:0,81,1321	0/0:33,0:33:93.31:0,93,1497	0/0:19,0:19:54.18:0,54,882	0/0:24,0:24:69.24:0,69,1124	0/0:21,0:21:63.20:0,63,1001	0/0:15,0:15:42.13:0,42,662	0/0:21,0:21:57.19:0,57,922	0/0:17,0:17:48.16:0,48,779	0/0:26,0:26:69.22:0,69,1103	0/0:22,0:22:66.23:0,66,1074	0/0:30,0:30:75.23:0,75,1199	0/0:10,0:10:30.10:0,30,490	0/0:28,0:28:69.19:0,69,1094	0/0:32,0:32:96.31:0,96,1540	0/0:22,0:22:63.19:0,63,1003	0/0:22,0:22:66.23:0,66,1078	0/0:15,0:15:42.14:0,42,686	0/0:20,0:20:54.17:0,54,857	0/0:30,0:30:87.28:0,87,1384	0/0:35,0:35:96.33:0,96,1564	0/0:24,0:23:69.24:0,69,1109	0/0:4,0:4:9.01:0,9,122
chr10	62314593	.	TTC	T	943.31	PASS	AB=0.958;AC=9;AF=0.161;AN=56;BaseQRankSum=6.325;DP=557;FS=0.640;HRun=0;HaplotypeScore=77.1027;InbreedingCoeff=0.6541;MQ=72.10;MQ0=2;MQRankSum=-0.230;QD=8.82;ReadPosRankSum=-2.275;VQSLOD=2.8745;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:26,1:27:8.31:8,0,728	1/1:0,5:5:15.05:185,15,0	0/0:22,0:19:24.31:0,24,285	0/0:35,0:24:25.80:0,26,436	0/0:23,0:23:30.71:0,31,790	0/0:19,0:19:42.14:0,42,677	0/0:15,0:15:42.14:0,42,665	1/1:8,15:22:42.13:516,42,0	0/0:16,0:16:33.57:0,34,483	0/0:25,0:25:66.21:0,66,1005	0/1:18,2:20:13.65:14,0,795	0/0:17,0:16:45.14:0,45,694	0/0:13,0:13:30.08:0,30,448	0/0:23,1:24:48.13:0,48,738	0/0:19,0:19:36.11:0,36,562	0/0:18,0:18:39.13:0,39,623	1/1:5,13:18:30.09:369,30,0	0/1:14,0:14:1.70:2,0,267	0/0:26,0:25:60.19:0,60,937	0/0:24,0:24:63.19:0,63,968	0/0:19,0:19:54.15:0,54,832	0/0:16,0:16:48.16:0,48,771	0/0:26,0:26:60.17:0,60,907	0/0:23,0:23:50.96:0,51,805	0/0:14,0:14:42.14:0,42,678	0/0:22,1:23:23.25:0,23,818	0/0:18,0:18:48.16:0,48,765	0/0:15,0:15:42.13:0,42,649
chr10	62314689	.	CCTT	C	563.29	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=4.466;DP=329;FS=3.698;HRun=0;HaplotypeScore=55.8573;InbreedingCoeff=0.9436;MQ=74.25;MQ0=5;MQRankSum=-1.423;QD=18.78;ReadPosRankSum=2.978;VQSLOD=2.7359;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:50.88:0,51,964	0/0:5,0:5:15.02:0,15,287	0/0:20,0:9:20.66:0,21,230	0/0:20,0:12:20.61:0,21,354	0/0:16,0:16:45.11:0,45,867	0/0:13,0:13:36.12:0,36,783	0/0:11,0:11:31.34:0,31,630	0/0:19,0:18:51.14:0,51,942	0/0:10,0:10:27.09:0,27,579	0/0:9,0:9:24.08:0,24,520	0/0:9,0:9:27.09:0,27,574	0/0:6,0:6:18.06:0,18,362	0/0:13,0:13:36.02:0,36,741	0/0:11,0:11:33.10:0,33,688	0/0:17,0:17:51.16:0,51,1053	0/0:11,0:10:30.07:0,30,582	0/0:13,0:13:36.12:0,36,797	0/0:12,0:12:33.11:0,33,724	0/0:11,0:11:33.11:0,33,712	0/0:8,0:8:24.08:0,24,525	0/0:9,0:9:27.09:0,27,576	1/1:0,6:6:9.03:150,9,0	1/1:1,13:14:17.50:297,18,0	1/1:0,9:9:15.05:249,15,0	0/0:9,0:9:27.09:0,27,566	0/0:13,0:13:39.13:0,39,827	0/0:11,0:11:33.11:0,33,720	0/0:4,0:4:11.98:0,12,137
chr10	62318095	.	TTC	T	80.82	PASS	AB=0.939;AC=7;AF=0.125;AN=56;BaseQRankSum=3.045;DP=239;FS=5.075;HRun=0;HaplotypeScore=52.1905;InbreedingCoeff=-0.1702;MQ=50.98;MQ0=0;MQRankSum=-5.248;QD=1.26;ReadPosRankSum=2.483;VQSLOD=0.9889;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:12,0:12:10.90:11,0,188	0/0:4,0:4:12.03:0,12,159	0/0:3,0:3:9.01:0,9,123	0/0:4,0:3:6.01:0,6,74	0/0:10,0:10:9.58:0,10,254	0/1:10,0:10:30.93:31,0,92	0/0:4,0:4:9:0,9,130	0/0:25,0:25:28.24:0,28,510	0/1:2,6:8:10.42:69,0,10	0/0:12,0:11:25.56:0,26,227	0/0:13,0:13:0.23:0,0,192	0/1:8,0:8:34.05:34,0,47	0/0:6,0:6:18.06:0,18,253	0/1:9,0:9:39.83:44,0,40	0/0:5,0:4:3.04:0,3,75	0/0:5,0:5:9.57:0,10,93	0/1:8,0:8:2.07:2,0,138	0/0:4,0:4:5.91:0,6,47	0/0:9,0:8:24.04:0,24,286	0/0:12,0:12:25.71:0,26,360	0/0:14,0:13:24.51:0,25,425	0/0:6,0:6:6.03:0,6,134	0/1:9,0:9:5.90:6,0,151	0/0:7,0:7:8.85:0,9,66	0/0:10,0:10:10.84:0,11,281	0/0:10,0:10:22.59:0,23,252	0/0:5,0:5:0.46:0,0,40	0/0:7,0:7:21.06:0,21,305
chr10	62321222	.	G	GT	5336.51	PASS	AB=0.960;AC=53;AF=0.946;AN=56;BaseQRankSum=-4.144;DP=452;FS=70.039;HRun=1;HaplotypeScore=88.2859;InbreedingCoeff=0.4914;MQ=69.41;MQ0=4;MQRankSum=0.036;QD=12.59;ReadPosRankSum=-0.339;VQSLOD=1.0788;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:20:31.57:214,32,0	1/1:6,0:6:9.41:51,9,0	0/0:28,0:17:44.51:0,45,280	0/1:23,0:14:19.37:19,0,139	1/1:17,0:17:18.71:81,19,0	1/1:2,10:12:12:123,12,0	1/1:2,19:21:23.76:265,24,0	1/1:11,0:11:23.78:194,24,0	1/1:17,0:17:38.83:191,39,0	1/1:1,11:12:29.11:246,29,0	1/1:1,8:9:8.81:79,9,0	1/1:13,3:16:43.78:380,44,0	1/1:6,1:7:8.88:89,9,0	1/1:1,12:13:8.94:73,9,0	1/1:17,7:23:54.78:467,55,0	1/1:15,1:16:12.47:250,12,0	1/1:16,0:16:27.79:190,28,0	1/1:7,2:8:19.50:153,20,0	1/1:13,5:18:45.78:401,46,0	1/1:1,18:19:25.44:220,25,0	1/1:6,20:26:19.97:216,20,0	1/1:19,0:19:35.99:243,36,0	1/1:12,0:12:18.97:158,19,0	1/1:22,0:22:10.73:148,11,0	1/1:16,1:17:43.73:365,44,0	1/1:1,15:16:35.85:304,36,0	1/1:3,17:20:18.04:142,18,0	1/1:1,4:5:8.80:73,9,0
chr10	62324107	.	GAAC	G	198.47	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.181;DP=709;FS=0.000;HRun=0;HaplotypeScore=88.4489;InbreedingCoeff=0.9569;MQ=54.89;MQ0=44;MQRankSum=-0.922;QD=16.54;ReadPosRankSum=1.273;VQSLOD=2.7577;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:41:96.33:0,96,2080	0/0:12,0:11:33.11:0,33,698	0/0:12,0:5:15.05:0,15,301	0/0:18,0:8:14.79:0,15,186	0/0:29,0:29:66.21:0,66,1400	0/0:23,0:18:33.11:0,33,710	0/0:31,0:31:71.92:0,72,1545	0/0:39,0:31:84.29:0,84,1853	1/1:4,8:9:18.06:289,18,0	0/0:23,0:21:60.21:0,60,1323	0/0:28,0:26:45.15:0,45,960	0/0:15,0:13:30.10:0,30,643	0/0:27,0:25:59.79:0,60,1313	0/0:29,0:28:63.67:0,64,1327	0/0:28,0:27:48.16:0,48,1058	0/0:27,0:25:69.24:0,69,1522	0/0:42,0:39:63.21:0,63,1350	0/0:18,0:16:39.13:0,39,831	0/0:19,0:12:30.10:0,30,662	0/0:27,0:25:60.21:0,60,1296	0/0:38,0:36:78.22:0,78,1619	0/0:24,0:24:60.21:0,60,1324	0/0:35,0:30:69.07:0,69,1477	0/0:18,0:17:33.11:0,33,728	0/0:20,0:18:48.16:0,48,1027	0/0:36,0:33:99:0,99,2123	0/0:28,0:28:72.25:0,72,1587	0/0:9,0:9:24.08:0,24,530
chr10	62324334	.	TA	T	323.90	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.300;DP=548;FS=6.181;HRun=1;HaplotypeScore=53.9004;InbreedingCoeff=0.9954;MQ=59.20;MQ0=6;MQRankSum=1.306;QD=26.99;ReadPosRankSum=0.409;VQSLOD=3.1188;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:63.18:0,63,956	0/0:9,0:9:27.05:0,27,403	0/0:20,0:17:51.12:0,51,719	0/0:15,0:14:28.50:0,28,503	0/0:23,0:23:66.12:0,66,954	0/0:20,0:20:60.19:0,60,934	0/0:20,0:18:54.05:0,54,791	0/0:28,0:27:78.21:0,78,1120	1/1:1,11:12:30.10:418,30,0	0/0:16,0:16:48.12:0,48,712	0/0:19,0:19:51.08:0,51,751	0/0:20,0:20:54.18:0,54,857	0/0:26,0:26:72.23:0,72,1109	0/0:10,0:10:27.09:0,27,428	0/0:22,0:21:54.18:0,54,847	0/0:17,0:17:48.12:0,48,736	0/0:32,0:32:87.25:0,87,1334	0/0:16,0:15:45.15:0,45,718	0/0:26,0:21:57.19:0,57,891	0/0:22,0:21:60.20:0,60,942	0/0:31,0:31:87.25:0,87,1315	0/0:9,0:9:27.06:0,27,375	0/0:14,0:14:42.01:0,42,608	0/0:17,0:17:48.15:0,48,743	0/0:21,0:20:60.20:0,60,954	0/0:29,0:29:87.29:0,87,1369	0/0:21,0:21:60.19:0,60,932	0/0:12,0:12:33.05:0,33,417
chr10	62325507	.	TA	T	14393.67	PASS	AB=0.823;AC=54;AF=0.964;AN=56;BaseQRankSum=-0.560;DP=492;FS=34.178;HRun=4;HaplotypeScore=101.2415;InbreedingCoeff=-0.0409;MQ=54.47;MQ0=0;MQRankSum=-4.374;QD=29.26;ReadPosRankSum=2.106;VQSLOD=2.6304;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,20:23:36.10:430,36,0	1/1:0,4:4:12.04:143,12,0	0/1:9,2:10:64.82:97,0,65	0/1:6,1:8:41.91:42,0,92	1/1:2,10:12:27.08:322,27,0	1/1:4,13:17:45.11:514,45,0	1/1:6,14:20:54.06:595,54,0	1/1:3,17:20:54.12:627,54,0	1/1:2,18:20:51.11:593,51,0	1/1:0,22:22:66.20:789,66,0	1/1:2,20:22:57.16:669,57,0	1/1:2,21:22:48.02:572,48,0	1/1:3,22:25:63.12:735,63,0	1/1:0,14:14:39.09:451,39,0	1/1:1,27:28:78.17:914,78,0	1/1:2,12:14:38.61:440,39,0	1/1:0,17:17:48.15:573,48,0	1/1:0,5:5:15.05:179,15,0	1/1:2,16:18:51.16:608,51,0	1/1:3,28:31:72.18:836,72,0	1/1:1,12:13:33.09:384,33,0	1/1:2,20:22:51.15:609,51,0	1/1:0,23:23:66.12:756,66,0	1/1:0,12:12:27.08:322,27,0	1/1:3,20:23:57.17:680,57,0	1/1:1,23:24:72.08:812,72,0	1/1:0,18:18:51.10:593,51,0	1/1:0,3:3:9.03:108,9,0
chr10	62325589	.	GC	G	11057.98	PASS	AB=0.950;AC=52;AF=0.963;AN=54;BaseQRankSum=-2.324;DP=421;FS=0.000;HRun=3;HaplotypeScore=124.7194;InbreedingCoeff=-0.0315;MQ=51.06;MQ0=0;MQRankSum=-2.442;QD=26.58;ReadPosRankSum=1.454;VQSLOD=3.9525;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,20:23:51.09:609,51,0	1/1:0,11:11:30.09:370,30,0	0/1:8,1:9:7.08:67,0,7	0/1:9,0:9:7.30:22,0,7	1/1:5,21:26:51.13:592,51,0	1/1:0,7:7:21.07:259,21,0	1/1:3,19:22:48.07:549,48,0	1/1:4,27:31:78.71:954,79,0	1/1:3,12:15:36.03:410,36,0	1/1:3,21:24:66.21:813,66,0	1/1:3,18:21:39.11:470,39,0	1/1:1,9:9:21.07:259,21,0	1/1:1,7:8:21.07:259,21,0	1/1:4,7:11:21:240,21,0	1/1:4,13:17:33.06:390,33,0	1/1:1,8:9:24.08:296,24,0	1/1:1,11:12:27.08:333,27,0	1/1:0,3:3:9.03:111,9,0	1/1:4,10:12:33.09:386,33,0	1/1:3,22:25:51.16:620,51,0	./.	1/1:1,22:23:57.18:702,57,0	1/1:3,13:16:33.04:376,33,0	1/1:3,6:9:12.02:134,12,0	1/1:6,22:28:66.19:800,66,0	1/1:3,14:17:42.13:519,42,0	1/1:0,10:10:24.08:296,24,0	1/1:0,6:6:18.06:222,18,0
chr10	62325599	.	TG	T	12636.09	PASS	AB=0.778;AC=53;AF=0.946;AN=56;BaseQRankSum=-3.588;DP=412;FS=7.478;HRun=2;HaplotypeScore=107.3271;InbreedingCoeff=0.4771;MQ=44.52;MQ0=0;MQRankSum=-2.076;QD=31.05;ReadPosRankSum=2.151;VQSLOD=4.0359;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,24:25:51.17:661,51,0	1/1:2,10:12:33.11:426,33,0	0/1:5,2:7:46.38:66,0,46	0/0:4,1:5:5.75:0,6,39	1/1:0,25:25:57.19:739,57,0	1/1:0,10:10:24.08:310,24,0	1/1:1,21:22:48.16:622,48,0	1/1:5,28:33:90.26:1140,90,0	1/1:2,15:17:45.12:563,45,0	1/1:0,21:21:63.20:812,63,0	1/1:1,17:18:39.13:504,39,0	1/1:1,9:9:24.08:311,24,0	1/1:0,7:7:21.07:272,21,0	1/1:0,8:8:21.07:272,21,0	1/1:1,16:17:36.12:467,36,0	1/1:1,10:11:24.08:311,24,0	1/1:1,11:12:27.09:345,27,0	1/1:0,5:5:12.04:156,12,0	1/1:0,12:10:30.10:389,30,0	1/1:3,20:23:54.18:698,54,0	1/1:2,5:7:6.02:78,6,0	1/1:0,22:22:57.19:738,57,0	1/1:1,13:14:36.12:464,36,0	1/1:1,10:11:15.05:194,15,0	1/1:0,25:25:75.24:971,75,0	1/1:0,14:14:39.13:506,39,0	1/1:0,12:12:27.09:349,27,0	1/1:1,6:7:21.07:271,21,0
chr10	62325712	.	GCTCTCTCTCTCTCTCTCTCTCTCTCT	G	150.35	PASS	AC=2;AF=0.045;AN=44;BaseQRankSum=1.576;DP=411;FS=0.000;HRun=0;HaplotypeScore=250.1264;InbreedingCoeff=0.2755;MQ=52.28;MQ0=27;MQRankSum=-2.222;QD=7.91;ReadPosRankSum=-0.817;VQSLOD=2.2595;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:22:2.97:0,3,20	./.	./.	./.	0/0:10,0:10:6.02:0,6,120	0/0:12,0:13:6:0,6,134	0/0:16,0:14:12.03:0,12,361	0/0:26,0:25:0.89:0,1,2	0/0:13,0:14:12.04:0,12,392	0/0:15,0:16:13.66:0,14,422	0/0:10,0:10:3:0,3,25	0/0:9,0:14:6.02:0,6,71	0/0:15,0:14:18.06:0,18,766	0/0:9,0:10:9.03:0,9,390	0/0:18,0:19:9.03:0,9,398	0/0:9,0:12:15.05:0,15,757	1/1:16,0:18:6.01:228,6,0	0/0:3,0:3:3.01:0,3,121	0/0:15,0:11:4.72:0,5,17	0/0:15,0:16:6.91:0,7,223	0/0:19,0:16:3.01:0,3,91	./.	./.	./.	0/0:13,0:14:8.77:0,9,274	0/0:22,0:22:15.94:0,16,746	0/0:12,0:12:15.05:0,15,707	0/0:7,0:4:3.74:0,4,12
chr10	62326833	.	G	GT	1305.88	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-7.645;DP=547;FS=1.240;HRun=8;HaplotypeScore=56.6081;InbreedingCoeff=0.9911;MQ=79.44;MQ0=0;MQRankSum=-2.549;QD=24.64;ReadPosRankSum=-0.079;VQSLOD=4.1710;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:33:86.04:0,86,766	0/0:7,0:7:18.01:0,18,165	0/0:17,0:15:18.53:0,19,137	0/0:21,0:20:28.21:0,28,244	0/0:27,0:27:69.01:0,69,625	0/0:16,0:16:41.98:0,42,373	0/0:11,0:11:21:0,21,188	0/0:29,0:29:65.98:0,66,585	0/0:19,0:19:51.03:0,51,467	0/0:36,0:36:99:0,99,905	0/0:17,0:17:47.86:0,48,416	0/0:17,0:17:51.02:0,51,463	0/0:24,0:24:69.04:0,69,631	0/0:13,0:13:39.02:0,39,357	0/0:19,0:19:54.02:0,54,494	0/0:16,0:16:45.02:0,45,407	0/0:11,0:11:30.01:0,30,274	0/0:11,0:11:30.02:0,30,274	0/0:24,0:24:53.99:0,54,483	0/0:27,0:27:72.04:0,72,659	0/0:13,0:13:36.46:0,36,321	1/1:1,11:12:24.07:277,24,0	1/1:5,24:29:72.21:830,72,0	1/1:3,9:12:31.63:341,32,0	0/0:24,0:24:60.01:0,60,545	0/0:29,1:30:46.41:0,46,675	0/0:22,0:22:66.01:0,66,595	0/0:9,0:9:27.01:0,27,247
chr10	62329179	.	GA	G	300.36	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.330;DP=789;FS=4.073;HRun=4;HaplotypeScore=81.1018;InbreedingCoeff=0.9691;MQ=61.24;MQ0=2;MQRankSum=-1.547;QD=14.30;ReadPosRankSum=1.532;VQSLOD=2.6608;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,123,1686	0/0:18,0:18:54.18:0,54,755	0/0:32,0:30:84.16:0,84,1104	0/0:14,0:13:36.12:0,36,503	0/0:27,0:27:81.25:0,81,1086	0/0:26,0:26:75.23:0,75,1026	0/0:25,0:25:69.15:0,69,847	0/0:29,0:29:84.25:0,84,1117	1/1:3,18:19:33.10:395,33,0	0/0:29,0:29:84.27:0,84,1161	0/0:21,0:22:27.36:0,27,737	0/0:33,0:33:99:0,99,1364	0/0:30,0:30:87.26:0,87,1184	0/0:37,0:37:99:0,108,1479	0/0:40,0:40:99:0,111,1522	0/0:33,0:33:96.28:0,96,1291	0/0:37,0:37:99:0,105,1441	0/0:24,0:24:69.18:0,69,924	0/0:31,0:28:78.25:0,78,1075	0/0:27,0:27:81.26:0,81,1118	0/0:41,0:41:99:0,120,1676	0/0:24,0:24:72.20:0,72,971	0/0:21,0:21:57.18:0,57,780	0/0:32,0:32:90.28:0,90,1239	0/0:23,0:23:66.20:0,66,891	0/0:38,0:38:99:0,105,1440	0/0:27,0:27:78.26:0,78,1090	0/0:4,0:4:12.04:0,12,168
chr10	62329719	.	TTC	T	983.07	PASS	AB=0.982;AC=18;AF=0.321;AN=56;BaseQRankSum=4.801;DP=562;FS=0.000;HRun=0;HaplotypeScore=133.7683;InbreedingCoeff=-0.3405;MQ=73.92;MQ0=1;MQRankSum=-1.540;QD=2.77;ReadPosRankSum=-5.228;VQSLOD=-0.1322;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:51.14:0,51,800	0/1:8,0:8:16.11:31,0,16	0/1:24,1:19:2.64:3,0,352	0/1:20,0:19:16.83:17,0,106	0/0:31,0:31:89.98:0,90,1318	0/1:17,0:17:85:85,0,113	0/1:24,0:24:37.15:37,0,251	1/1:27,0:27:38.82:181,39,0	0/1:20,0:20:31.39:90,0,31	0/1:39,0:39:73.66:74,0,343	0/0:17,0:17:12.19:0,12,207	0/1:16,0:16:45.21:45,0,156	0/0:19,0:18:0.14:0,0,229	0/0:23,0:23:6.56:0,7,287	0/1:25,1:26:45.04:45,0,263	0/0:18,0:18:18.05:0,18,223	0/1:12,0:12:28.84:54,0,29	0/1:15,0:15:28.89:29,0,160	0/1:16,0:16:10.79:11,0,192	0/1:33,0:33:99:279,0,194	0/0:14,0:14:3.74:0,4,137	0/0:20,0:20:59.95:0,60,900	0/0:18,0:18:53.88:0,54,801	0/0:16,0:16:23.97:0,24,372	0/0:13,0:13:6.84:0,7,155	0/1:25,0:25:22.05:22,0,237	0/1:24,1:25:87.45:87,0,235	0/1:4,1:5:43.52:52,0,44
chr10	62329747	.	CA	C	4610.39	PASS	AB=0.875;AC=39;AF=0.696;AN=56;BaseQRankSum=6.278;DP=542;FS=11.977;HRun=16;HaplotypeScore=120.2582;InbreedingCoeff=0.7170;MQ=76.18;MQ0=1;MQRankSum=-0.708;QD=11.88;ReadPosRankSum=5.421;VQSLOD=3.2267;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:12,1:19:5.43:0,5,113	1/1:3,6:10:21.58:119,22,0	0/0:32,0:19:12.98:0,13,73	0/1:26,0:15:4.37:4,0,25	0/0:26,0:29:49.29:0,49,303	1/1:2,12:14:35.20:215,35,0	1/1:4,19:23:43.72:310,44,0	0/1:14,6:20:16.59:88,0,17	0/0:20,0:20:32.65:0,33,240	1/1:6,20:26:58.67:355,59,0	1/1:3,19:22:52.79:322,53,0	1/1:3,20:23:52.63:322,53,0	1/1:2,15:16:41.18:251,41,0	1/1:6,13:19:37.79:233,38,0	1/1:4,15:20:37.23:221,37,0	1/1:2,18:20:47.06:287,47,0	0/1:12,1:14:28.06:55,0,28	1/1:6,10:16:32.10:195,32,0	1/1:5,6:11:20.37:124,20,0	1/1:9,23:33:75.18:452,75,0	1/1:1,6:7:17.65:107,18,0	0/0:6,0:19:38.04:0,38,232	0/0:15,0:17:29.42:0,29,200	0/0:3,0:17:5.82:0,6,36	1/1:4,9:13:26.34:161,26,0	1/1:4,20:24:58.76:357,59,0	1/1:4,21:25:61.60:376,62,0	1/1:1,3:4:8.78:54,9,0
chr10	62329854	.	G	GT	14882.98	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=0.005;DP=624;FS=2.338;HRun=4;HaplotypeScore=89.8603;InbreedingCoeff=0.9996;MQ=58.91;MQ0=5;MQRankSum=2.253;QD=35.78;ReadPosRankSum=2.912;VQSLOD=5.0855;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:66.15:0,66,725	0/0:15,0:15:45.13:0,45,510	0/0:18,0:11:24.05:0,24,260	0/0:20,0:17:38.84:0,39,412	0/0:31,0:31:87.25:0,87,986	1/1:0,24:24:69.23:944,69,0	1/1:3,17:20:48.16:657,48,0	0/0:25,0:25:60.15:0,60,672	0/0:18,0:18:45.13:0,45,510	1/1:2,33:35:99:1342,102,0	1/1:1,21:22:60.16:800,60,0	1/1:3,19:23:54.18:739,54,0	1/1:0,20:20:54.18:739,54,0	1/1:2,23:25:66.22:903,66,0	1/1:2,20:22:60.20:821,60,0	1/1:1,20:21:60.20:817,60,0	0/0:26,0:26:78.21:0,78,875	1/1:3,13:16:33.11:445,33,0	1/1:5,15:19:45.12:592,45,0	1/1:2,29:31:87.29:1190,87,0	1/1:1,18:19:54.18:739,54,0	1/1:2,21:23:60.16:799,60,0	1/1:1,21:22:51.17:697,51,0	1/1:1,23:24:66.22:903,66,0	1/1:0,18:18:42.14:575,42,0	0/0:20,0:20:57.16:0,57,646	1/1:1,29:30:87.29:1184,87,0	0/0:11,0:11:33.09:0,33,373
chr10	62331490	.	AGT	A	1270.11	PASS	AB=0.965;AC=13;AF=0.232;AN=56;BaseQRankSum=0.459;DP=539;FS=0.000;HRun=0;HaplotypeScore=100.1464;InbreedingCoeff=0.4997;MQ=53.08;MQ0=23;MQRankSum=1.439;QD=6.83;ReadPosRankSum=-0.723;VQSLOD=2.7342;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:27:47.42:385,47,0	0/1:10,1:11:4.13:136,0,4	0/1:9,0:4:13.58:17,0,14	0/0:13,0:3:8.75:0,9,64	0/0:11,17:28:4.80:0,5,28	0/0:17,0:16:20.86:0,21,186	0/0:27,0:26:47.66:0,48,433	1/1:35,0:32:36.34:356,36,0	1/1:24,0:24:15.61:126,16,0	0/0:21,0:21:53.30:0,53,485	0/0:20,0:21:29.08:0,29,245	0/0:10,0:9:15.36:0,15,144	0/0:17,0:16:20.82:0,21,179	0/0:13,0:12:17.66:0,18,177	0/1:16,0:16:9.63:10,0,152	0/1:21,0:21:23.37:23,0,142	1/1:23,2:24:45.16:387,45,0	0/0:13,0:12:23.23:0,23,229	0/0:22,0:21:42.62:0,43,443	0/0:16,0:16:24.79:0,25,226	0/0:26,0:23:18.01:0,18,182	0/1:13,0:13:0.72:1,0,137	0/0:15,0:15:24.43:0,24,197	0/0:16,0:15:5.99:0,6,50	0/0:15,0:15:1.47:0,1,174	0/0:28,0:28:74.81:0,75,737	0/0:22,0:22:44.65:0,45,426	0/0:13,0:13:33.36:0,33,295
chr10	62331541	.	T	TTA	4037.60	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=1.258;DP=497;FS=1.457;HRun=0;HaplotypeScore=75.9179;InbreedingCoeff=0.8701;MQ=65.31;MQ0=1;MQRankSum=1.113;QD=39.98;ReadPosRankSum=-3.160;VQSLOD=4.1330;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,24:25:69.22:1100,69,0	1/1:2,5:7:9.03:151,9,0	0/0:16,0:9:3.48:0,3,33	0/0:20,0:12:0.47:0,0,47	0/0:24,0:24:56.99:0,57,624	0/0:23,0:23:36.19:0,36,754	0/0:13,0:13:30.09:0,30,370	1/1:4,42:47:99:2035,129,0	0/0:16,0:16:39.07:0,39,464	0/0:26,0:26:63.18:0,63,771	0/0:27,0:27:66.19:0,66,815	0/0:9,0:9:24.06:0,24,292	0/0:12,0:12:36.10:0,36,445	0/0:12,0:12:33.11:0,33,420	0/0:12,0:12:33:0,33,397	0/0:16,0:16:33.11:0,33,420	1/1:3,19:22:45.15:753,45,0	0/0:14,0:14:36.07:0,36,428	0/0:18,0:18:36.10:0,36,441	0/0:23,0:23:66.21:0,66,839	0/0:10,0:10:27.07:0,27,329	0/0:8,0:8:20.75:0,21,267	0/0:16,0:16:48.15:0,48,603	0/0:7,0:7:14.96:0,15,170	0/0:15,0:15:21.13:0,21,405	0/0:24,0:24:66.18:0,66,799	0/0:28,0:28:75.21:0,75,916	0/0:7,0:7:21.07:0,21,267
chr10	62332549	.	TG	T	1775.95	PASS	AB=0.909;AC=18;AF=0.321;AN=56;BaseQRankSum=7.130;DP=381;FS=6.415;HRun=10;HaplotypeScore=41.4780;InbreedingCoeff=0.8263;MQ=72.57;MQ0=0;MQRankSum=-1.431;QD=14.68;ReadPosRankSum=0.935;VQSLOD=3.1534;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,13:17:35.99:312,36,0	1/1:0,7:7:21:182,21,0	0/0:9,0:9:10.59:0,11,124	0/0:9,0:10:9.49:0,9,98	0/0:20,0:20:54.13:0,54,589	0/0:18,0:18:48.12:0,48,523	0/0:11,0:11:33.06:0,33,346	1/1:5,12:17:38.85:313,39,0	1/1:0,8:8:24:208,24,0	0/1:12,1:13:5.13:5,0,160	0/0:17,1:18:25.04:0,25,477	0/0:11,1:12:4.18:0,4,273	0/0:7,0:7:21.05:0,21,224	0/0:11,0:11:26.44:0,26,274	0/0:10,0:10:30.08:0,30,332	0/0:19,0:20:47.95:0,48,503	1/1:4,15:19:35.98:312,36,0	0/0:15,0:17:38.88:0,39,388	0/0:17,0:17:23.89:0,24,430	0/0:14,1:15:10.05:0,10,337	0/0:8,0:8:21.05:0,21,224	1/1:2,9:11:23.99:208,24,0	1/1:0,10:10:29.99:260,30,0	1/1:4,7:11:20.92:173,21,0	0/0:14,0:14:39.09:0,39,422	0/0:20,0:20:28.03:0,28,432	0/0:23,0:23:63.17:0,63,696	0/1:7,1:8:4.99:5,0,178
chr10	62332658	.	C	CA	8149.38	PASS	AB=1.000;AC=35;AF=0.625;AN=56;BaseQRankSum=-12.460;DP=490;FS=7.219;HRun=8;HaplotypeScore=46.3998;InbreedingCoeff=0.8956;MQ=70.24;MQ0=0;MQRankSum=-1.473;QD=26.90;ReadPosRankSum=1.941;VQSLOD=5.4434;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:69.03:0,69,631	0/0:9,0:9:24:0,24,215	0/1:8,0:8:26.86:27,0,68	0/0:7,0:6:11.59:0,12,90	0/0:25,0:25:62.99:0,63,566	1/1:0,17:17:48.14:554,48,0	1/1:1,7:8:18.05:208,18,0	0/0:37,0:37:86.98:0,87,781	0/0:18,0:18:48:0,48,434	1/1:1,21:22:63.17:717,63,0	1/1:2,32:34:96.29:1108,96,0	1/1:3,6:9:15.04:173,15,0	1/1:1,7:8:15.04:173,15,0	1/1:2,5:7:18.05:204,18,0	1/1:3,12:15:36.11:416,36,0	1/1:1,19:20:57.17:658,57,0	0/0:18,0:18:51.01:0,51,462	1/1:2,20:22:57.17:658,57,0	1/1:5,15:20:20.39:466,20,0	1/1:5,21:26:57.13:643,57,0	1/1:2,12:14:33.10:381,33,0	0/0:15,0:15:42.02:0,42,384	0/0:25,0:25:60.03:0,60,549	0/0:8,0:8:21.01:0,21,192	1/1:1,21:22:54.16:623,54,0	1/1:7,16:23:48.14:553,48,0	1/1:4,18:22:45.05:519,45,0	1/1:4,2:6:6.02:69,6,0
chr10	62335051	.	CTAGT	C	14761.25	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=5.802;DP=580;FS=7.212;HRun=0;HaplotypeScore=99.2402;InbreedingCoeff=0.9861;MQ=77.90;MQ0=1;MQRankSum=-4.532;QD=31.47;ReadPosRankSum=3.084;VQSLOD=4.6203;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,28:35:75.26:1254,75,0	1/1:4,4:8:15.05:250,15,0	0/0:26,0:26:36.07:0,36,654	0/0:24,0:23:47.49:0,47,916	1/1:4,11:15:27.06:422,27,0	1/1:9,11:20:24.08:401,24,0	1/1:7,13:20:36.12:602,36,0	1/1:16,22:38:66.19:1043,66,0	1/1:10,7:17:21.07:351,21,0	1/1:2,16:18:51.17:850,51,0	1/1:3,20:23:54.10:842,54,0	1/1:6,12:18:21.07:351,21,0	1/1:4,19:23:45.05:752,45,0	1/1:5,9:14:21.07:351,21,0	1/1:9,14:23:30.10:502,30,0	1/1:1,25:26:57.19:953,57,0	1/1:4,20:24:54.18:903,54,0	1/1:1,6:7:18.06:301,18,0	1/1:6,15:21:45.15:748,45,0	1/1:9,15:24:42.14:700,42,0	1/1:3,23:26:51.17:831,51,0	0/0:20,0:20:51.18:0,51,1243	0/0:21,0:21:36.11:0,36,829	0/0:20,0:20:45.13:0,45,1017	1/1:5,10:15:21.07:351,21,0	1/1:5,22:26:63.19:999,63,0	1/1:5,17:22:45.14:752,45,0	1/1:0,5:5:15.05:251,15,0
chr10	62335229	.	GT	G	489.99	PASS	AB=0.929;AC=4;AF=0.071;AN=56;BaseQRankSum=2.000;DP=558;FS=1.285;HRun=12;HaplotypeScore=101.3220;InbreedingCoeff=0.3861;MQ=65.24;MQ0=10;MQRankSum=0.755;QD=5.05;ReadPosRankSum=-0.626;VQSLOD=2.0905;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:38.51:0,39,526	0/0:9,0:9:18.04:0,18,183	0/1:45,0:16:3.60:4,0,25	0/0:51,1:21:18.10:0,18,114	1/1:3,25:28:74.69:577,75,0	0/0:15,0:15:38.86:0,39,363	0/0:16,1:17:15.93:0,16,335	0/0:24,0:26:8.63:0,9,382	0/0:3,0:6:13.33:0,13,79	0/0:21,0:25:48.15:0,48,527	0/0:24,2:26:14.53:0,15,500	0/0:10,1:11:3.82:0,4,220	0/0:12,0:13:32.90:0,33,318	0/0:11,0:11:4.39:0,4,219	0/0:14,0:14:35.39:0,35,321	0/0:19,0:19:45.08:0,45,448	0/0:27,0:28:68.19:0,68,661	0/0:16,1:21:22.25:0,22,316	0/0:19,0:14:39.08:0,39,396	0/0:17,1:19:24.69:0,25,412	0/0:7,0:7:20.71:0,21,194	0/0:16,1:17:12.68:0,13,295	0/0:18,0:17:37.15:0,37,352	0/0:18,0:18:45.01:0,45,442	0/0:22,0:22:49.59:0,50,622	0/1:20,3:24:16.33:16,0,428	0/0:11,0:11:32.43:0,32,312	0/0:7,0:6:15.01:0,15,145
chr10	62336790	.	GA	G	781.85	PASS	AB=0.783;AC=7;AF=0.125;AN=56;BaseQRankSum=7.038;DP=602;FS=1.174;HRun=11;HaplotypeScore=71.0614;InbreedingCoeff=0.5575;MQ=73.97;MQ0=0;MQRankSum=-1.019;QD=8.23;ReadPosRankSum=3.946;VQSLOD=2.3657;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:83.70:0,84,872	0/0:2,0:2:6.02:0,6,64	0/1:26,2:22:22.22:22,0,128	0/0:20,0:19:33.11:0,33,302	0/0:41,3:44:40.21:0,40,1015	0/0:18,0:19:47.95:0,48,494	0/0:24,0:24:63.14:0,63,662	0/0:26,0:26:62.62:0,63,629	0/0:13,1:14:17.46:0,17,391	0/0:21,0:21:57.14:0,57,608	0/0:25,0:25:63.08:0,63,644	0/0:28,0:28:60.13:0,60,628	0/0:18,0:18:38.77:0,39,395	0/0:20,1:21:12.33:0,12,330	0/0:15,0:15:24.06:0,24,256	0/0:25,1:26:40.51:0,41,603	0/0:22,0:23:53.97:0,54,556	0/0:11,0:11:27.05:0,27,280	0/0:14,0:15:26.89:0,27,265	0/0:24,0:24:63.16:0,63,672	0/0:16,1:17:23.47:0,23,449	0/1:3,11:15:2.99:174,0,3	1/1:6,16:22:35.94:296,36,0	1/1:3,19:22:50.94:419,51,0	0/0:17,0:21:44.60:0,45,418	0/0:32,0:33:84.04:0,84,878	0/0:26,0:26:62.99:0,63,652	0/1:5,1:6:12.61:13,0,84
chr10	62339370	.	A	AG	772.91	PASS	AB=0.867;AC=14;AF=0.269;AN=52;BaseQRankSum=2.915;DP=567;FS=9.636;HRun=0;HaplotypeScore=89.2242;InbreedingCoeff=-0.3540;MQ=39.36;MQ0=39;MQRankSum=-3.987;QD=2.41;ReadPosRankSum=-3.682;VQSLOD=0.6980;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:32:26.41:0,26,273	0/0:8,0:7:12.29:0,12,158	./.	./.	0/0:17,0:14:8.45:0,8,205	0/1:12,4:12:23.13:23,0,157	0/1:29,0:24:4.40:4,0,618	0/0:27,0:23:56.92:0,57,681	0/1:21,3:22:33.83:34,0,377	0/1:20,9:25:99:228,0,479	0/1:21,4:20:85.78:86,0,208	0/0:21,0:16:38.96:0,39,458	0/1:18,3:16:31.98:32,0,224	0/0:14,0:11:20.94:0,21,245	0/1:21,2:16:44.79:45,0,201	0/1:15,0:13:26.78:27,0,188	0/0:29,0:24:44.93:0,45,491	0/1:20,2:17:1.08:1,0,255	0/0:15,1:12:32.79:0,33,285	0/1:13,6:18:88.25:88,0,362	0/0:13,1:8:10.71:0,11,69	0/0:24,0:20:23.55:0,24,207	0/0:19,0:15:15.72:0,16,147	0/0:21,0:16:15.01:0,15,187	0/1:29,8:36:76.02:76,0,457	0/1:17,4:17:79.88:80,0,358	0/1:22,4:21:74.68:75,0,402	0/1:11,3:9:22.89:119,0,23
chr10	62339374	.	AAAAGAAAG	A	72.47	PASS	AC=4;AF=0.080;AN=50;BaseQRankSum=-1.403;DP=574;FS=0.000;HRun=0;HaplotypeScore=134.7888;InbreedingCoeff=0.5997;MQ=40.47;MQ0=41;MQRankSum=-0.200;QD=1.61;ReadPosRankSum=-1.179;VQSLOD=2.3239;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:15.03:0,15,173	0/0:7,0:6:9.03:0,9,239	./.	./.	0/0:16,0:14:11.79:0,12,83	0/0:16,0:12:3.01:0,3,104	0/0:28,0:22:21.07:0,21,401	0/0:29,0:24:0:0,0,0	0/0:24,0:22:30.10:0,30,717	0/0:27,0:23:36.12:0,36,1037	0/0:26,0:21:24.47:0,24,557	0/0:18,0:18:6.02:0,6,193	0/0:21,0:17:24.08:0,24,630	0/0:11,0:13:9.03:0,9,272	0/0:24,0:17:18.06:0,18,362	0/0:14,0:12:9.50:0,10,294	0/0:29,0:24:18.06:0,18,552	0/0:22,0:17:9.03:0,9,262	0/0:16,0:12:6.02:0,6,127	0/0:20,0:19:24.08:0,24,661	0/0:14,0:8:6.02:0,6,101	1/1:16,8:19:17.85:140,18,0	1/1:13,8:17:4.26:37,4,0	./.	0/0:34,0:33:24.55:0,25,602	0/0:19,0:16:30.10:0,30,733	0/0:29,0:24:27.08:0,27,686	0/0:12,0:7:12.04:0,12,342
chr10	62339375	.	AAAG	A	63.74	PASS	AB=0.902;AC=4;AF=0.077;AN=52;BaseQRankSum=1.483;DP=579;FS=10.728;HRun=0;HaplotypeScore=101.3215;InbreedingCoeff=-0.0940;MQ=40.75;MQ0=40;MQRankSum=-3.089;QD=0.76;ReadPosRankSum=-2.811;VQSLOD=0.3642;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:23,13:33:32.63:33,0,78	0/1:6,1:6:30.06:30,0,134	./.	./.	0/1:17,0:14:71.21:94,0,71	0/0:17,0:13:15.86:0,16,149	0/0:28,0:22:56.79:0,57,484	0/0:29,0:24:35.55:0,36,336	0/0:24,0:22:51.02:0,51,561	0/0:28,0:24:66.08:0,66,766	0/0:27,0:22:36.33:0,36,364	0/0:24,0:19:38:0,38,323	0/0:22,0:17:35.90:0,36,330	0/0:16,0:13:21:0,21,216	0/0:24,0:17:23.92:0,24,243	0/0:15,0:13:24:0,24,239	0/0:28,0:23:30.01:0,30,441	0/0:21,0:16:20.94:0,21,198	0/0:18,0:14:20.31:0,20,157	0/0:20,0:19:22.16:0,22,459	0/0:15,0:9:8.91:0,9,65	0/1:24,0:19:13.79:14,0,58	0/0:21,0:17:5.78:0,6,61	0/0:24,0:19:11.98:0,12,99	0/0:33,0:32:45.48:0,45,480	0/0:20,0:16:44.94:0,45,479	0/0:29,0:24:55.04:0,55,506	0/0:11,0:7:11.93:0,12,162
chr10	62339907	.	GTT	G	3607.77	PASS	AB=0.741;AC=34;AF=0.607;AN=56;BaseQRankSum=-2.281;DP=466;FS=11.461;HRun=14;HaplotypeScore=68.6198;InbreedingCoeff=0.5415;MQ=73.70;MQ0=0;MQRankSum=2.717;QD=11.20;ReadPosRankSum=4.811;VQSLOD=1.2318;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,1:29:29.58:0,30,288	0/0:4,0:9:13.99:0,14,65	0/0:12,0:12:8.35:0,8,62	0/1:9,0:9:2.68:3,0,30	0/0:16,0:22:47.89:0,48,298	1/1:6,9:17:29.36:245,29,0	1/1:6,12:20:33.76:298,34,0	0/1:20,3:27:49.37:49,0,213	1/1:11,11:23:10.72:264,11,0	1/1:5,7:13:21.93:199,22,0	0/1:5,4:9:8.55:112,0,9	1/1:5,8:13:17.73:213,18,0	1/1:2,16:19:39.47:356,39,0	1/1:12,7:20:17.44:150,17,0	1/1:2,16:18:32.94:305,33,0	1/1:2,7:10:23.74:206,24,0	0/0:9,0:27:31.29:0,31,222	1/1:5,7:14:11.48:142,11,0	1/1:11,10:23:15.17:268,15,0	0/1:12,7:20:37.03:189,0,37	1/1:8,9:17:3.43:149,3,0	0/0:13,0:14:35.53:0,36,391	0/0:12,0:12:30.04:0,30,325	0/0:17,1:18:14.18:0,14,451	1/1:2,7:9:13.27:136,13,0	0/1:5,9:15:3.33:144,0,3	1/1:6,6:14:6.79:111,7,0	0/1:7,3:11:36.23:69,0,36
chr10	62340822	.	T	TATAGATAG	8852.82	PASS	AB=1.000;AC=41;AF=0.788;AN=52;BaseQRankSum=-6.579;DP=667;FS=16.026;HRun=0;HaplotypeScore=191.4081;InbreedingCoeff=0.5868;MQ=60.24;MQ0=7;MQRankSum=-0.368;QD=15.67;ReadPosRankSum=-1.862;VQSLOD=2.6176;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:48.14:0,48,840	0/0:10,0:10:9.03:0,9,170	./.	0/1:7,0:2:0:0,0,0	0/1:44,0:44:51.76:52,0,668	1/1:31,0:31:36.12:461,36,0	1/1:16,0:16:12.01:147,12,0	1/1:29,0:28:0.89:2,1,0	0/0:20,0:20:21.07:0,21,386	1/1:34,0:33:42:1132,42,0	1/1:20,0:21:9.50:268,10,0	1/1:24,0:25:18.06:695,18,0	1/1:32,0:34:18.03:470,18,0	1/1:21,0:21:18.03:494,18,0	1/1:27,0:30:24.03:772,24,0	1/1:29,0:29:27.07:669,27,0	0/0:10,0:10:6.02:0,6,103	1/1:9,0:9:3.01:39,3,0	1/1:26,0:27:33.06:823,33,0	1/1:27,0:27:33.10:433,33,0	1/1:31,0:31:20.61:309,21,0	1/1:19,5:27:5.75:239,6,0	1/1:14,9:24:14.80:604,15,0	1/1:16,1:16:9.12:137,9,0	1/1:28,0:28:18.04:473,18,0	0/1:28,0:28:99:189,0,310	1/1:25,0:25:36.08:444,36,0	./.
chr10	62340849	.	A	AGATA	6216.25	PASS	AB=1.000;AC=40;AF=0.800;AN=50;BaseQRankSum=-4.242;DP=648;FS=16.072;HRun=0;HaplotypeScore=157.3646;InbreedingCoeff=0.5851;MQ=57.33;MQ0=7;MQRankSum=0.124;QD=11.51;ReadPosRankSum=-3.295;VQSLOD=2.7465;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:48.06:0,48,455	0/0:10,0:10:8.96:0,9,86	./.	./.	0/1:38,0:37:99:114,0,348	1/1:25,8:33:33.11:762,33,0	1/1:17,0:17:12:122,12,0	1/1:31,0:28:1.72:5,2,0	0/0:22,0:22:21.03:0,21,202	1/1:30,0:29:35.91:502,36,0	1/1:22,0:22:9.01:141,9,0	1/1:22,0:22:18.06:326,18,0	1/1:22,0:22:12:133,12,0	1/1:26,0:26:17.95:306,18,0	1/1:30,0:30:24.06:355,24,0	1/1:28,0:28:24.04:332,24,0	0/0:11,0:11:6.01:0,6,62	1/1:11,0:11:3.01:69,3,0	1/1:28,0:26:24.03:385,24,0	1/1:32,0:32:33.10:647,33,0	1/1:29,0:29:21.06:439,21,0	1/1:23,0:23:6.02:104,6,0	1/1:21,0:21:15.05:260,15,0	1/1:16,0:15:8.61:113,9,0	1/1:25,0:25:18.04:256,18,0	0/1:26,0:26:99:192,0,129	1/1:30,0:30:36.08:653,36,0	./.
chr10	62340873	.	AGATG	A	7329.60	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=-14.819;DP=668;FS=0.664;HRun=0;HaplotypeScore=167.0547;InbreedingCoeff=-0.2462;MQ=68.94;MQ0=2;MQRankSum=2.245;QD=12.68;ReadPosRankSum=-1.761;VQSLOD=4.3152;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,31:33:45.15:837,45,0	1/1:0,13:13:9.03:168,9,0	0/0:24,0:20:60.09:0,60,606	0/0:14,0:12:29.03:0,29,276	0/1:32,0:32:99:274,0,581	0/1:40,0:40:99:319,0,219	0/1:21,0:21:69.60:255,0,70	1/1:31,0:29:77.89:691,78,0	1/1:1,22:23:21.07:391,21,0	0/1:37,0:37:99:416,0,312	0/1:18,0:18:82.45:206,0,82	0/1:27,0:27:99:338,0,140	0/1:20,0:20:99:200,0,101	0/1:25,0:25:75.94:266,0,76	0/1:28,0:28:99:364,0,131	0/1:24,0:24:99:128,0,184	0/1:11,0:11:60.29:149,0,60	1/1:11,0:11:3.61:185,4,0	0/1:25,0:25:99:240,0,235	0/1:39,0:39:99:487,0,193	0/1:25,0:25:99:308,0,138	0/0:19,0:19:39.01:0,39,440	0/0:18,0:18:45:0,45,583	0/0:15,0:14:21.44:0,21,194	0/1:25,0:25:99:234,0,135	0/1:30,0:30:99:328,0,398	0/1:32,0:32:99:380,0,206	1/1:8,0:8:20.92:166,21,0
chr10	62341067	.	A	AT	9202.74	PASS	AB=0.917;AC=35;AF=0.625;AN=56;BaseQRankSum=-12.069;DP=610;FS=0.689;HRun=10;HaplotypeScore=61.1702;InbreedingCoeff=0.9425;MQ=74.88;MQ0=0;MQRankSum=-0.621;QD=23.30;ReadPosRankSum=0.191;VQSLOD=5.4739;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:21:43.95:0,44,348	0/0:18,0:19:46.94:0,47,371	0/0:17,0:17:17.75:0,18,236	0/1:8,0:9:1.87:2,0,43	0/0:37,0:39:99:0,100,797	1/1:1,20:21:54.14:576,54,0	1/1:1,10:11:30.08:320,30,0	0/0:29,0:30:76.91:0,77,618	0/0:19,0:19:41.91:0,42,345	1/1:6,25:31:70.39:727,70,0	1/1:4,21:25:63.09:652,63,0	1/1:4,18:25:13.40:506,13,0	1/1:5,22:28:47.35:683,47,0	1/1:4,13:18:17.33:374,17,0	1/1:6,23:29:32.50:551,32,0	1/1:3,14:17:39.10:416,39,0	0/0:10,0:10:23.59:0,24,197	1/1:5,16:21:45.11:479,45,0	1/1:1,20:21:57.14:608,57,0	1/1:5,30:38:74.06:933,74,0	1/1:7,14:21:11.45:327,11,0	0/0:24,1:26:41.97:0,42,540	0/0:19,0:20:49.95:0,50,400	0/0:14,0:14:41.95:0,42,345	1/1:2,15:18:47.95:494,48,0	1/1:4,21:25:54.11:565,54,0	1/1:1,23:23:69.17:735,69,0	1/1:1,10:11:24.06:256,24,0
chr10	62341756	.	G	GA	915.54	PASS	AB=0.823;AC=14;AF=0.250;AN=56;BaseQRankSum=0.588;DP=664;FS=0.978;HRun=14;HaplotypeScore=86.7813;InbreedingCoeff=0.3275;MQ=75.82;MQ0=1;MQRankSum=0.279;QD=4.11;ReadPosRankSum=-3.529;VQSLOD=0.6258;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:11,18:29:38.50:165,0,38	1/1:3,0:11:14.71:72,15,0	0/0:42,0:28:1.61:0,2,65	0/0:18,0:10:3.17:0,3,42	1/1:8,11:25:7.78:237,8,0	0/0:18,1:24:28.01:0,28,268	0/0:17,0:20:22.73:0,23,238	1/1:10,2:27:45.42:286,45,0	0/1:8,12:20:36.72:82,0,37	0/1:26,1:31:11.04:11,0,119	0/0:15,0:18:36.52:0,37,223	0/0:20,0:22:36.36:0,36,223	0/1:24,1:26:45.51:46,0,184	0/0:27,0:29:60.01:0,60,374	0/0:17,0:19:33.43:0,33,204	0/0:21,1:23:8.01:0,8,171	1/1:3,2:21:28.72:166,29,0	0/0:12,0:15:31.52:0,32,198	0/0:13,0:14:22.66:0,23,140	0/0:26,1:27:17.59:0,18,235	0/0:19,1:21:8.13:0,8,172	0/0:28,1:30:24.99:0,25,283	0/0:25,1:27:18.99:0,19,235	0/1:16,4:21:12.23:12,0,177	0/0:22,0:23:33.91:0,34,206	0/0:27,2:32:0.34:0,0,226	0/0:35,0:35:61.64:0,62,396	0/1:10,1:12:6.67:7,0,78
chr10	62344378	.	ATGTG	A	3473.61	PASS	AB=0.911;AC=35;AF=0.700;AN=50;BaseQRankSum=-0.264;DP=443;FS=7.178;HRun=0;HaplotypeScore=86.9709;InbreedingCoeff=0.4707;MQ=55.94;MQ0=7;MQRankSum=2.356;QD=11.10;ReadPosRankSum=2.152;VQSLOD=2.2365;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:40,0:40:19.17:300,0,19	0/0:11,0:13:8.97:0,9,124	./.	./.	1/1:15,0:15:21.49:223,21,0	1/1:13,7:21:15.04:197,15,0	0/1:14,0:14:36.86:109,0,37	0/0:22,0:21:19.26:0,19,202	0/0:7,0:7:12.04:0,12,233	1/1:11,3:14:9.02:125,9,0	1/1:11,11:22:8.36:270,8,0	1/1:4,5:9:5.87:94,6,0	1/1:7,7:14:17.69:277,18,0	1/1:11,8:20:12.03:169,12,0	1/1:6,9:16:4.56:222,5,0	1/1:4,3:8:5.88:75,6,0	0/0:18,0:29:6.02:0,6,123	0/1:14,8:20:29.62:129,0,30	1/1:11,5:13:13.78:210,14,0	1/1:3,6:9:6.02:94,6,0	1/1:9,9:18:6.02:94,6,0	./.	0/0:9,0:8:3.74:0,4,72	0/0:18,0:20:9.03:0,9,151	1/1:6,3:9:9.03:141,9,0	1/1:6,12:18:5.17:407,5,0	1/1:7,9:18:18.05:244,18,0	1/1:7,2:9:6.02:94,6,0
chr10	62344501	.	AG	A	1598.72	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.406;DP=416;FS=8.636;HRun=1;HaplotypeScore=41.5585;InbreedingCoeff=0.9480;MQ=74.01;MQ0=0;MQRankSum=-0.162;QD=33.31;ReadPosRankSum=2.614;VQSLOD=2.4902;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,25:26:66.22:923,66,0	0/0:10,0:10:30.10:0,30,480	0/0:13,0:12:30.85:0,31,461	0/0:6,0:6:11.17:0,11,189	1/1:0,22:22:57.19:797,57,0	0/0:27,0:27:81.26:0,81,1270	0/0:14,0:14:42.14:0,42,669	0/0:31,0:31:93.27:0,93,1399	0/0:7,0:7:21.07:0,21,336	0/0:27,0:27:81.28:0,81,1294	0/0:14,0:14:42.14:0,42,669	0/0:8,0:8:24.07:0,24,358	0/0:7,0:7:21.05:0,21,312	0/0:11,0:11:33.11:0,33,528	0/0:12,0:12:36.12:0,36,575	0/0:4,0:4:12.04:0,12,189	0/0:24,0:24:69.24:0,69,1100	0/0:20,0:20:57.19:0,57,902	0/0:15,0:15:45.15:0,45,718	0/0:17,0:17:51.16:0,51,791	0/0:11,0:11:33.11:0,33,523	0/0:6,0:6:18.06:0,18,288	0/0:9,0:9:27.09:0,27,432	0/0:9,0:9:27.01:0,27,374	0/0:24,0:24:72.22:0,72,1126	0/0:23,0:23:69.22:0,69,1078	0/0:14,0:14:39.13:0,39,606	0/0:5,0:5:15.05:0,15,240
chr10	62349552	.	T	TCCTC	418.46	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-2.309;DP=557;FS=0.000;HRun=0;HaplotypeScore=91.8704;InbreedingCoeff=0.8934;MQ=71.60;MQ0=4;MQRankSum=-0.783;QD=16.09;ReadPosRankSum=-1.865;VQSLOD=2.9301;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:56.51:0,57,827	0/0:9,0:9:18.06:0,18,294	0/0:27,0:18:18.95:0,19,292	0/0:29,0:20:17.03:0,17,205	0/0:23,0:23:54.18:0,54,882	1/1:12,14:25:12.43:505,12,0	0/0:32,0:33:54.18:0,54,866	0/0:32,0:32:28.51:0,29,490	0/0:19,0:19:39.11:0,39,597	0/0:33,0:33:72.25:0,72,1185	0/0:8,0:8:21.07:0,21,344	0/0:20,0:21:54.15:0,54,841	0/0:16,0:16:27.08:0,27,423	0/0:14,0:14:27.09:0,27,448	0/0:27,0:27:69.21:0,69,1086	0/0:16,0:16:30.09:0,30,469	0/0:13,0:13:36.12:0,36,594	0/0:12,0:12:26.56:0,27,380	0/0:13,0:13:18.06:0,18,278	0/0:20,0:20:42.13:0,42,671	0/0:26,0:26:51.11:0,51,731	0/0:18,0:18:33.11:0,33,547	0/0:8,0:8:18.06:0,18,298	0/0:10,0:10:21.04:0,21,298	0/0:20,0:20:39.13:0,39,643	0/0:27,0:27:51.16:0,51,823	0/0:26,0:24:63.20:0,63,1017	0/0:4,0:5:12.03:0,12,164
chr10	62350635	.	TTCC	T	11835.06	PASS	AB=1.000;AC=43;AF=0.768;AN=56;BaseQRankSum=12.104;DP=748;FS=1.234;HRun=0;HaplotypeScore=96.2506;InbreedingCoeff=0.9009;MQ=59.64;MQ0=14;MQRankSum=0.300;QD=21.21;ReadPosRankSum=3.282;VQSLOD=4.9060;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:46:99:0,100,1773	1/1:0,4:4:3.01:43,3,0	0/1:27,0:5:1.64:2,0,66	0/0:24,0:12:13.51:0,14,217	0/0:33,0:33:74.44:0,74,1367	1/1:6,13:18:16.47:411,16,0	1/1:10,17:27:30.10:427,30,0	1/1:17,16:31:48.01:540,48,0	1/1:5,20:24:39.13:555,39,0	1/1:10,24:34:49.14:858,49,0	1/1:2,14:16:32.85:352,33,0	1/1:5,17:22:43.45:634,43,0	1/1:5,22:27:39.02:555,39,0	1/1:4,27:31:60.20:854,60,0	1/1:5,23:28:51.17:726,51,0	1/1:4,21:25:51.17:726,51,0	1/1:7,24:32:51.64:727,52,0	1/1:3,19:22:39.13:555,39,0	1/1:11,8:16:24.04:287,24,0	1/1:6,23:29:63.11:850,63,0	1/1:12,22:34:35.85:481,36,0	0/0:26,0:25:49.21:0,49,1081	0/0:26,0:25:60.64:0,61,1079	0/0:33,0:34:87.26:0,87,1685	1/1:4,25:29:45.15:641,45,0	1/1:7,21:28:63.17:842,63,0	1/1:11,19:29:38.78:555,39,0	1/1:5,11:14:15.05:214,15,0
chr10	62353526	.	T	TC	17373.28	PASS	AB=0.814;AC=54;AF=0.964;AN=56;BaseQRankSum=-0.202;DP=517;FS=7.593;HRun=3;HaplotypeScore=275.1161;InbreedingCoeff=-0.0403;MQ=55.12;MQ0=0;MQRankSum=-3.924;QD=33.60;ReadPosRankSum=3.592;VQSLOD=2.5862;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,21:25:54.14:732,54,0	1/1:0,11:11:33.11:460,33,0	0/1:5,3:8:16.50:112,0,16	0/1:8,1:9:35.22:35,0,75	1/1:7,25:32:72.23:1003,72,0	1/1:3,18:21:57.18:779,57,0	1/1:7,12:17:42.05:543,42,0	1/1:5,26:31:90.29:1238,90,0	1/1:1,21:21:63.21:876,63,0	1/1:6,20:26:63.20:863,63,0	1/1:4,13:17:36.12:502,36,0	1/1:3,20:23:66.16:883,66,0	1/1:2,17:19:57.16:767,57,0	1/1:2,14:16:42.10:565,42,0	1/1:4,13:17:42.13:570,42,0	1/1:1,14:15:45.11:607,45,0	1/1:3,9:11:24.08:333,24,0	1/1:2,12:14:39.10:524,39,0	1/1:5,14:19:45.14:614,45,0	1/1:1,18:19:48.15:652,48,0	1/1:7,14:21:42.10:535,42,0	1/1:1,15:16:42.14:583,42,0	1/1:4,20:24:60.19:818,60,0	1/1:5,14:19:36.96:497,37,0	1/1:1,19:20:54.18:754,54,0	1/1:5,18:23:57.19:793,57,0	1/1:1,15:16:48.13:651,48,0	1/1:0,3:3:6.02:84,6,0
chr10	62353535	.	T	TC	16283.69	PASS	AB=1.000;AC=54;AF=0.964;AN=56;BaseQRankSum=1.663;DP=494;FS=19.056;HRun=2;HaplotypeScore=322.4875;InbreedingCoeff=-0.0286;MQ=41.20;MQ0=0;MQRankSum=-3.818;QD=32.96;ReadPosRankSum=3.050;VQSLOD=-0.3727;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,22:23:51.11:725,51,0	1/1:2,11:14:33.08:452,33,0	0/1:3,0:3:8.94:52,0,9	0/1:5,0:5:19.72:20,0,91	1/1:4,26:31:66.18:910,66,0	1/1:2,18:20:48.12:665,48,0	1/1:1,12:13:36.08:486,36,0	1/1:12,20:32:72.16:980,72,0	1/1:4,19:23:57.19:818,57,0	1/1:3,21:25:63.21:891,63,0	1/1:3,12:15:30.10:430,30,0	1/1:4,20:24:63.13:858,63,0	1/1:2,16:18:51.17:732,51,0	1/1:5,12:17:39.12:539,39,0	1/1:0,14:14:42.10:580,42,0	1/1:3,12:15:42.14:591,42,0	1/1:6,9:14:23.88:335,24,0	1/1:2,11:13:36.12:518,36,0	1/1:2,14:16:45.13:620,45,0	1/1:3,16:19:39.13:560,39,0	1/1:4,12:16:30.09:413,30,0	1/1:1,16:17:36.12:517,36,0	1/1:3,20:23:48.10:645,48,0	1/1:3,14:17:31.10:470,31,0	1/1:2,22:24:57.15:796,57,0	1/1:2,18:20:54.18:776,54,0	1/1:0,19:19:57.19:819,57,0	1/1:1,2:3:6.02:86,6,0
chr10	62353547	.	C	CT	18212.34	PASS	AB=0.889;AC=54;AF=0.964;AN=56;BaseQRankSum=1.391;DP=508;FS=7.738;HRun=1;HaplotypeScore=380.8116;InbreedingCoeff=-0.0379;MQ=39.15;MQ0=0;MQRankSum=-3.175;QD=35.85;ReadPosRankSum=1.743;VQSLOD=2.1988;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,19:25:54.14:782,54,0	1/1:1,14:15:45.15:648,45,0	0/1:2,0:2:24.81:25,0,33	0/1:5,2:7:50.25:107,0,50	1/1:4,26:30:69.10:948,69,0	1/1:5,17:22:63.13:875,63,0	1/1:6,12:17:45.11:624,45,0	1/1:8,23:31:81.21:1146,81,0	1/1:2,20:22:63.17:907,63,0	1/1:3,18:21:63.17:901,63,0	1/1:2,12:14:33.07:467,33,0	1/1:2,22:24:72.17:1026,72,0	1/1:2,17:19:54.11:752,54,0	1/1:1,14:15:42.14:626,42,0	1/1:4,15:19:48.08:682,48,0	1/1:3,13:16:45.12:643,45,0	1/1:2,14:15:29.90:447,30,0	1/1:1,12:13:30.10:449,30,0	1/1:5,12:17:51.06:682,51,0	1/1:6,11:17:36:464,36,0	1/1:3,11:14:30.05:422,30,0	1/1:3,14:17:42.05:567,42,0	1/1:8,19:27:63.16:875,63,0	1/1:2,13:15:28.09:444,28,0	1/1:3,21:24:60.07:809,60,0	1/1:7,17:24:63.21:920,63,0	1/1:3,19:22:66.09:886,66,0	1/1:0,2:2:6.02:90,6,0
chr10	62353586	.	C	CT	16457.13	PASS	AB=0.770;AC=54;AF=0.964;AN=56;BaseQRankSum=4.708;DP=536;FS=9.119;HRun=1;HaplotypeScore=364.3105;InbreedingCoeff=-0.0387;MQ=50.82;MQ0=0;MQRankSum=-5.365;QD=30.70;ReadPosRankSum=0.792;VQSLOD=1.9717;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,26:27:72.23:900,72,0	1/1:2,14:16:42.05:499,42,0	0/1:5,2:8:64.40:70,0,64	0/1:10,3:12:48.03:138,0,48	1/1:4,31:36:62.91:616,63,0	1/1:2,23:25:66.17:809,66,0	1/1:0,22:20:54.17:659,54,0	1/1:4,27:31:87.24:1191,87,0	1/1:1,16:16:48.11:598,48,0	1/1:2,20:22:66.10:859,66,0	1/1:1,10:11:23.99:249,24,0	1/1:3,26:29:81.19:968,81,0	1/1:0,20:20:60.14:709,60,0	1/1:0,22:22:63.19:764,63,0	1/1:1,16:17:48.08:571,48,0	1/1:0,16:16:48.12:578,48,0	1/1:2,12:14:36.08:429,36,0	1/1:0,6:6:18.06:244,18,0	1/1:1,15:16:44.18:601,44,0	1/1:1,23:24:66.09:750,66,0	1/1:2,6:8:15.05:188,15,0	1/1:1,21:23:54.07:595,54,0	1/1:4,29:33:93.02:985,93,0	1/1:2,13:15:24.03:275,24,0	1/1:2,20:22:54.12:635,54,0	1/1:4,17:21:60.06:721,60,0	1/1:1,16:17:51.16:656,51,0	1/1:0,5:5:15.05:200,15,0
chr10	62353590	.	AG	A	12502.38	PASS	AB=0.868;AC=54;AF=0.964;AN=56;BaseQRankSum=4.270;DP=528;FS=9.149;HRun=4;HaplotypeScore=364.9673;InbreedingCoeff=-0.0208;MQ=51.18;MQ0=0;MQRankSum=-6.134;QD=23.68;ReadPosRankSum=1.661;VQSLOD=0.7842;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,26:27:69.07:659,69,0	1/1:0,15:15:41.41:375,41,0	0/1:7,1:8:17.33:17,0,63	0/1:9,2:10:35.35:35,0,43	1/1:6,30:36:56.74:485,57,0	1/1:3,23:26:69.09:673,69,0	1/1:0,22:20:57.05:535,57,0	1/1:5,24:29:72.19:799,72,0	1/1:4,14:17:42.02:398,42,0	1/1:1,21:22:62.84:675,63,0	1/1:1,9:10:23.93:205,24,0	1/1:1,26:27:77.97:718,78,0	1/1:3,18:21:57:509,57,0	1/1:2,20:22:59.97:542,60,0	1/1:1,16:17:45.04:429,45,0	1/1:0,16:16:48.05:460,48,0	1/1:0,13:13:33.04:311,33,0	1/1:0,6:6:18.04:189,18,0	1/1:1,14:15:41.47:442,41,0	1/1:2,22:24:66.02:601,66,0	1/1:2,5:7:15:151,15,0	1/1:3,20:23:60:549,60,0	1/1:2,31:33:83.95:740,84,0	1/1:2,12:14:25.15:208,25,0	1/1:1,20:21:54.04:506,54,0	1/1:0,20:20:56.93:581,57,0	1/1:4,16:20:57.06:555,57,0	1/1:0,5:5:15.03:155,15,0
chr10	62355324	.	CA	C	2061.25	PASS	AB=0.913;AC=7;AF=0.125;AN=56;BaseQRankSum=6.664;DP=659;FS=3.677;HRun=3;HaplotypeScore=68.6911;InbreedingCoeff=0.8405;MQ=88.96;MQ0=0;MQRankSum=-0.185;QD=24.25;ReadPosRankSum=-1.504;VQSLOD=2.7110;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,129,1836	1/1:1,9:10:27.08:327,27,0	0/0:27,0:27:75.23:0,75,1009	0/0:22,0:22:63.21:0,63,889	0/0:15,0:15:45.15:0,45,648	0/0:19,0:19:51.14:0,51,697	0/0:33,0:33:96.28:0,96,1342	1/1:2,27:29:81.18:939,81,0	0/0:21,0:21:60.20:0,60,861	0/0:33,0:33:90.28:0,90,1235	0/0:14,0:14:36.11:0,36,497	0/0:28,0:28:84.27:0,84,1189	0/0:22,0:22:60.19:0,60,841	0/0:21,0:21:63.18:0,63,884	0/0:28,0:28:84.27:0,84,1190	0/0:21,0:21:60.20:0,60,863	1/1:0,25:25:75.24:930,75,0	0/1:19,2:21:14.18:14,0,717	0/0:25,0:25:69.19:0,69,955	0/0:27,0:27:81.25:0,81,1144	0/0:35,0:35:99:0,102,1427	0/0:18,0:18:51.17:0,51,734	0/0:20,0:20:60.19:0,60,845	0/0:16,0:16:48.15:0,48,673	0/0:25,0:25:75.21:0,75,1023	0/0:26,0:26:78.25:0,78,1090	0/0:28,0:28:81.26:0,81,1145	0/0:7,0:7:21.07:0,21,302
chr10	62355489	.	CT	C	10537.41	PASS	AB=0.686;AC=45;AF=0.804;AN=56;BaseQRankSum=3.528;DP=688;FS=8.616;HRun=11;HaplotypeScore=76.9478;InbreedingCoeff=0.6558;MQ=68.96;MQ0=0;MQRankSum=-2.800;QD=17.68;ReadPosRankSum=3.339;VQSLOD=5.6810;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,45:55:77.94:1031,78,0	1/1:4,10:14:29.96:246,30,0	0/1:11,1:10:12.11:12,0,58	0/0:17,0:14:16.43:0,16,210	1/1:2,21:24:52.19:452,52,0	1/1:1,13:15:32:252,32,0	1/1:3,29:32:85.94:695,86,0	1/1:9,27:36:74.83:609,75,0	1/1:5,14:20:14.99:319,15,0	1/1:5,21:26:62.89:513,63,0	1/1:4,18:24:57.99:455,58,0	1/1:3,32:35:86.87:714,87,0	1/1:1,20:21:41.95:344,42,0	1/1:2,18:21:49.98:400,50,0	1/1:5,19:24:50.92:419,51,0	0/1:6,17:23:13.04:319,0,13	1/1:2,18:22:52:406,52,0	1/1:2,17:20:49.97:400,50,0	1/1:4,12:17:34.97:274,35,0	1/1:7,27:35:25.48:578,25,0	1/1:5,22:28:64.95:523,65,0	0/0:26,0:26:57.14:0,57,602	0/0:17,2:20:10.70:0,11,509	0/0:26,1:29:32.31:0,32,525	1/1:4,21:25:56.92:468,57,0	1/1:5,24:29:68.86:563,69,0	1/1:4,18:23:43.98:351,44,0	0/1:3,10:14:28.96:193,0,29
chr10	62356398	.	C	CTTG	31017.63	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-5.513;DP=787;FS=3.869;HRun=0;HaplotypeScore=136.0598;InbreedingCoeff=0.9983;MQ=71.52;MQ0=0;MQRankSum=-9.264;QD=42.55;ReadPosRankSum=5.323;VQSLOD=6.2939;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,32:43:87.12:1659,87,0	1/1:6,4:10:23.87:416,24,0	0/0:26,0:26:48.16:0,48,684	0/0:32,0:31:63.55:0,64,887	1/1:20,12:32:54.40:917,54,0	1/1:8,8:16:39.13:781,39,0	1/1:6,9:15:36.12:723,36,0	1/1:11,25:37:87.26:1604,87,0	1/1:10,16:26:29.14:966,29,0	1/1:13,27:41:87.28:1705,87,0	1/1:8,20:28:69.23:1328,69,0	1/1:10,29:40:90.31:1779,90,0	1/1:8,20:28:66.20:1271,66,0	1/1:8,15:23:51.17:928,51,0	1/1:17,14:30:66.22:1267,66,0	1/1:6,17:23:57.18:1100,57,0	1/1:8,28:36:60.24:1507,60,0	1/1:7,16:23:51.13:992,51,0	1/1:8,22:31:75.23:1429,75,0	1/1:11,15:26:63.18:1100,63,0	1/1:14,20:34:75.24:1462,75,0	1/1:6,19:25:63.19:1132,63,0	1/1:4,19:23:48.16:966,48,0	1/1:15,22:37:84.28:1714,84,0	1/1:6,20:26:54.18:1055,54,0	1/1:16,12:28:62.85:1115,63,0	1/1:14,19:32:78.27:1480,78,0	1/1:2,11:13:31.92:623,32,0
chr10	62356424	.	GGAGAACATCTCC	G	1193.01	PASS	AB=0.849;AC=5;AF=0.089;AN=56;BaseQRankSum=7.393;DP=814;FS=0.000;HRun=0;HaplotypeScore=404.8551;InbreedingCoeff=-0.0956;MQ=68.76;MQ0=1;MQRankSum=-7.258;QD=10.11;ReadPosRankSum=0.157;VQSLOD=0.6470;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:28,2:30:8.87:9,0,3822	0/1:3,3:6:99:268,0,391	0/0:31,0:29:81.27:0,81,4218	0/0:38,0:35:99:0,102,5064	0/1:26,2:31:99:402,0,4023	0/0:23,0:23:66.23:0,66,4072	0/0:20,0:20:48.15:0,48,2662	0/0:40,0:40:99:0,120,6437	0/1:22,6:28:99:582,0,3479	0/0:32,0:32:93.28:0,93,5186	0/0:29,0:29:84.29:0,84,5108	0/0:40,0:40:99:0,114,6798	0/0:28,0:28:84.29:0,84,5011	0/0:25,0:25:75.26:0,75,4575	0/0:32,0:32:93.32:0,93,5845	0/0:22,0:22:66.23:0,66,4009	0/0:29,0:30:43.28:0,43,5190	0/0:29,0:29:62.99:0,63,4815	0/0:29,0:29:84.27:0,84,4552	0/0:36,0:36:99:0,108,6528	0/0:40,0:40:99:0,108,6156	0/0:26,0:26:78.27:0,78,4775	0/0:23,0:23:69.24:0,69,4257	0/0:40,0:40:99:0,105,6669	0/0:24,0:24:69.23:0,69,4137	0/1:22,1:23:47.44:47,0,3709	0/0:45,0:43:99:0,129,7696	0/0:14,0:14:35.38:0,35,2194
chr10	62356443	.	C	CTGT	18754.92	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-2.728;DP=816;FS=2.472;HRun=0;HaplotypeScore=195.4993;InbreedingCoeff=0.6821;MQ=64.63;MQ0=3;MQRankSum=1.607;QD=25.55;ReadPosRankSum=1.690;VQSLOD=5.1410;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:25:7.69:113,8,0	1/1:6,0:6:11.35:89,11,0	0/0:41,0:33:3.08:0,3,144	0/0:41,0:34:6.02:0,6,79	1/1:35,0:34:33.37:283,33,0	1/1:6,18:24:48.16:936,48,0	1/1:6,16:22:36.12:702,36,0	1/1:40,0:38:24.67:122,25,0	1/1:28,0:28:41.35:366,41,0	1/1:16,8:24:27.56:525,28,0	1/1:20,9:29:36.59:702,37,0	1/1:22,16:38:63.20:1166,63,0	1/1:10,14:25:54.17:1006,54,0	1/1:10,15:25:48.15:900,48,0	1/1:9,27:36:75.26:1425,75,0	1/1:11,11:22:45.15:836,45,0	1/1:24,0:24:3.82:52,4,0	1/1:10,17:28:10.67:896,11,0	1/1:23,1:23:15.05:233,15,0	1/1:16,19:36:22.68:1066,23,0	1/1:17,25:42:72.25:1387,72,0	1/1:16,11:27:42.14:775,42,0	1/1:19,7:26:27.56:493,28,0	1/1:17,25:43:69.19:1289,69,0	1/1:17,7:24:21.07:410,21,0	1/1:12,16:28:62.77:1105,63,0	1/1:14,27:39:49.80:1643,50,0	1/1:6,4:10:12.04:234,12,0
chr10	62356453	.	TG	T	749.23	PASS	AB=0.824;AC=5;AF=0.089;AN=56;BaseQRankSum=0.691;DP=839;FS=1.252;HRun=1;HaplotypeScore=209.4618;InbreedingCoeff=-0.0981;MQ=59.24;MQ0=9;MQRankSum=-2.664;QD=5.13;ReadPosRankSum=-2.023;VQSLOD=-0.5469;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:27,3:28:99:109,0,728	0/1:2,7:9:63.14:189,0,63	0/0:43,0:30:86.22:0,86,1178	0/0:37,0:29:63.04:0,63,1013	0/1:34,2:35:99:204,0,923	0/0:22,0:22:60.10:0,60,634	0/0:23,0:23:57.10:0,57,625	0/1:35,9:38:99:266,0,1071	0/0:27,0:27:47.44:0,47,668	0/0:27,0:27:80.02:0,80,992	0/0:30,0:29:86.24:0,86,1048	0/0:38,0:38:99:0,108,1270	0/0:27,0:27:81.14:0,81,913	0/0:27,0:27:81.17:0,81,957	0/0:38,0:38:99:0,102,1080	0/0:24,0:24:69.13:0,69,807	0/1:23,4:27:99:99,0,756	0/0:28,0:28:75.99:0,76,812	0/0:26,0:24:72.19:0,72,970	0/0:38,0:38:99:0,114,1379	0/0:40,0:40:99:0,110,1113	0/0:27,0:27:81.20:0,81,999	0/0:24,0:24:69.16:0,69,867	0/0:44,0:44:99:0,111,1263	0/0:21,0:21:63.15:0,63,808	0/0:29,0:29:44.70:0,45,856	0/0:43,0:42:99:0,123,1307	0/0:10,0:10:25.87:0,26,288
chr10	62356480	.	T	TTG	356.97	PASS	AB=0.778;AC=2;AF=0.036;AN=56;BaseQRankSum=6.824;DP=758;FS=2.054;HRun=0;HaplotypeScore=188.1027;InbreedingCoeff=-0.0372;MQ=68.94;MQ0=7;MQRankSum=-6.849;QD=6.49;ReadPosRankSum=-1.704;VQSLOD=3.2981;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:21,6:25:99:115,0,646	0/0:11,0:11:30.08:0,30,458	0/0:34,0:26:69.23:0,69,1049	0/0:31,0:27:78.26:0,78,1141	0/1:18,9:27:99:331,0,408	0/0:24,0:24:69.23:0,69,1044	0/0:26,0:26:63.21:0,63,937	0/0:46,0:41:99:0,114,1580	0/0:22,0:22:50.29:0,50,756	0/0:22,0:22:62.26:0,62,909	0/0:20,0:19:57.14:0,57,808	0/0:28,0:28:78.24:0,78,1158	0/0:28,0:28:78.18:0,78,1088	0/0:28,0:28:84.01:0,84,1165	0/0:43,0:43:99:0,117,1749	0/0:23,0:23:55.23:0,55,846	0/0:20,0:20:47.13:0,47,573	0/0:23,0:23:63.13:0,63,888	0/0:14,0:13:36.04:0,36,551	0/0:36,0:36:99:0,103,1548	0/0:37,0:37:99:0,108,1626	0/0:22,0:22:57.02:0,57,826	0/0:21,0:21:57.12:0,57,842	0/0:38,0:38:93.16:0,93,1356	0/0:24,0:24:69.23:0,69,1041	0/0:31,0:31:86.30:0,86,1264	0/0:44,0:43:99:0,123,1798	0/0:7,0:7:21.07:0,21,307
chr10	62359777	.	CTGTGTGTGTGTGTGTGTG	C	54.83	PASS	AB=0.750;AC=3;AF=0.058;AN=52;BaseQRankSum=0.637;DP=578;FS=2.416;HRun=0;HaplotypeScore=250.6417;InbreedingCoeff=0.5325;MQ=62.13;MQ0=17;MQRankSum=0.449;QD=1.10;ReadPosRankSum=0.706;VQSLOD=2.8323;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:5.81:0,6,212	0/0:10,0:10:9.91:0,10,371	./.	./.	0/0:26,0:26:3.01:0,3,46	0/0:17,0:17:15.05:0,15,867	0/0:21,0:18:15.05:0,15,690	0/0:26,0:26:30.95:0,31,510	0/0:18,0:17:17.27:0,17,432	0/0:15,0:15:15.05:0,15,799	0/0:10,0:9:6.02:0,6,392	0/0:22,0:21:30.09:0,30,1431	0/0:14,0:14:27.09:0,27,1256	0/0:20,0:20:27.98:0,28,1461	0/0:19,0:19:36.12:0,36,1683	0/0:15,0:16:21.07:0,21,1152	0/0:33,0:32:52.42:0,52,1809	0/0:25,0:19:39.04:0,39,1735	0/0:19,0:18:17.63:0,18,737	0/0:22,0:21:24.08:0,24,1113	0/0:38,0:37:36.49:0,36,1658	0/1:16,8:23:0:0,0,0	0/0:16,3:18:0.89:0,1,2	1/1:23,3:25:9:137,9,0	0/0:14,0:14:12.01:0,12,377	0/0:22,0:20:30.09:0,30,1168	0/0:13,0:13:20.85:0,21,1117	0/0:4,0:4:4.26:0,4,173
chr10	62359788	.	T	TAC	370.36	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=4.425;DP=621;FS=1.128;HRun=0;HaplotypeScore=109.4029;InbreedingCoeff=0.6598;MQ=46.77;MQ0=43;MQRankSum=-0.586;QD=5.61;ReadPosRankSum=-0.274;VQSLOD=3.0624;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:22,6:25:14.66:209,15,0	0/0:9,0:8:24.06:0,24,309	0/0:22,0:9:27.09:0,27,411	0/0:13,0:7:17.25:0,17,194	1/1:8,14:22:2.70:46,3,0	0/0:19,0:18:32.31:0,32,474	0/0:21,0:16:30.55:0,31,423	0/0:28,0:27:72.57:0,73,1028	0/1:16,0:14:8.37:229,0,8	0/0:28,0:25:71.24:0,71,950	0/0:13,0:11:21.07:0,21,282	0/0:26,0:24:57.18:0,57,800	0/0:22,0:20:47.87:0,48,642	0/0:23,0:21:45.14:0,45,580	0/0:25,0:23:42.05:0,42,553	0/0:17,0:17:33.07:0,33,449	0/0:39,0:35:76.95:0,77,948	0/0:30,0:23:63.14:0,63,772	0/0:20,0:19:54.10:0,54,697	0/0:25,0:23:47.84:0,48,680	0/0:47,0:44:75.28:0,75,1034	0/0:20,0:19:20.28:0,20,312	0/0:14,0:12:12.04:0,12,165	0/0:28,0:25:26.83:0,27,368	0/0:18,0:18:30.09:0,30,424	0/0:26,0:23:66.22:0,66,936	0/0:19,0:17:39.02:0,39,489	0/0:3,0:3:5.96:0,6,43
chr10	62359826	.	TGTGA	T	3841.26	PASS	AB=0.992;AC=31;AF=0.596;AN=52;BaseQRankSum=-6.735;DP=588;FS=1.617;HRun=0;HaplotypeScore=113.4878;InbreedingCoeff=0.4076;MQ=41.21;MQ0=59;MQRankSum=2.210;QD=9.51;ReadPosRankSum=5.250;VQSLOD=2.2809;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:27:23.80:0,24,180	1/1:8,0:8:8.38:54,8,0	./.	./.	0/0:24,0:21:11.98:0,12,99	0/1:13,0:10:34.37:63,0,34	1/1:25,0:14:17.94:143,18,0	0/0:21,0:18:31.10:0,31,197	0/0:25,0:21:27.86:0,28,221	0/1:30,0:24:18.23:311,0,18	1/1:14,0:11:7.81:55,8,0	0/1:18,0:16:11.04:126,0,11	1/1:22,1:18:9.32:251,9,0	0/1:17,1:16:41.77:243,0,42	1/1:29,0:25:6.53:298,7,0	0/1:21,0:20:27.60:130,0,28	0/1:37,0:33:6.14:154,0,6	1/1:26,2:22:29.87:429,30,0	0/1:15,0:14:2.98:222,0,3	1/1:17,1:17:20.60:266,21,0	1/1:40,1:34:40.27:388,40,0	0/0:23,0:20:20.97:0,21,174	0/0:17,0:15:14.98:0,15,125	0/0:41,0:38:59.86:0,60,487	1/1:13,0:13:8.97:70,9,0	1/1:25,1:22:18.47:340,18,0	1/1:22,1:21:7.97:203,8,0	1/1:3,0:4:8.97:94,9,0
chr10	62359837	.	GAGAGAC	G	314.07	PASS	AB=1.000;AC=9;AF=0.173;AN=52;BaseQRankSum=-2.121;DP=599;FS=26.536;HRun=0;HaplotypeScore=157.2081;InbreedingCoeff=0.4497;MQ=40.87;MQ0=53;MQRankSum=-1.507;QD=2.28;ReadPosRankSum=-2.700;VQSLOD=0.7142;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:32,0:26:56.68:57,0,395	1/1:2,5:7:1.01:4,1,0	./.	./.	0/1:23,0:20:2.93:3,0,234	0/0:17,0:15:9.45:0,9,97	0/0:25,0:15:12.04:0,12,197	1/1:11,9:18:26.98:350,27,0	0/1:23,0:19:0.56:1,0,357	0/0:30,0:24:39.29:0,39,730	0/0:12,0:10:2.98:0,3,49	0/0:18,0:16:12.03:0,12,172	0/0:25,0:22:37.64:0,38,456	0/0:16,0:15:14.94:0,15,129	0/0:28,0:25:18.12:0,18,472	0/0:23,0:22:24.64:0,25,240	1/1:15,18:29:2.96:19,3,0	0/0:24,0:19:35.65:0,36,441	0/0:17,0:17:44.45:0,44,701	0/0:20,0:20:14.84:0,15,193	0/0:44,0:38:30.06:0,30,455	0/0:26,0:24:33.11:0,33,953	0/0:20,0:18:21.07:0,21,567	0/0:44,0:41:60.18:0,60,1838	0/0:9,0:9:9.03:0,9,155	0/0:26,0:23:57.04:0,57,835	0/0:23,0:21:30.22:0,30,340	0/0:8,0:8:13.36:0,13,154
chr10	62359873	.	G	GAGAGAGAC	5554.13	PASS	AB=0.658;AC=30;AF=0.556;AN=54;BaseQRankSum=-5.691;DP=697;FS=2.650;HRun=0;HaplotypeScore=159.4703;InbreedingCoeff=0.7210;MQ=53.86;MQ0=20;MQRankSum=-2.287;QD=14.77;ReadPosRankSum=-1.718;VQSLOD=4.0606;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:41:73.09:0,73,1468	0/0:7,0:7:5.81:0,6,99	0/0:26,0:10:13.07:0,13,247	0/0:42,0:18:0.05:0,0,282	0/0:21,0:19:51.16:0,51,1175	1/1:10,10:19:3.48:71,3,0	0/1:16,0:22:0:0,0,0	0/0:26,0:26:41.98:0,42,710	0/0:24,0:21:45.07:0,45,1018	1/1:17,9:25:18.82:933,19,0	1/1:5,0:13:2.71:113,3,0	0/1:6,12:19:0:0,0,0	1/1:6,13:22:18.46:725,18,0	1/1:3,20:21:3.16:121,3,0	1/1:9,20:32:0.92:2,1,0	1/1:11,11:23:6.39:248,6,0	0/0:26,0:25:30.03:0,30,542	1/1:12,10:23:9.03:364,9,0	1/1:17,7:22:24.06:604,24,0	1/1:7,5:15:5.69:121,6,0	1/1:23,18:42:0.47:2,0,0	0/0:23,0:22:54.16:0,54,1250	0/0:19,0:18:30.09:0,30,664	0/0:46,0:46:60.21:0,60,1365	./.	1/1:10,17:30:54.14:1380,54,0	1/1:9,12:21:8.92:355,9,0	1/1:1,7:8:15.05:515,15,0
chr10	62360492	.	GT	G	11746.97	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=1.562;DP=608;FS=5.024;HRun=9;HaplotypeScore=69.8679;InbreedingCoeff=0.9972;MQ=78.04;MQ0=1;MQRankSum=-4.173;QD=23.22;ReadPosRankSum=3.340;VQSLOD=5.8554;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,30:35:87.03:796,87,0	1/1:0,7:7:21.01:192,21,0	0/0:27,1:23:26.53:0,27,491	0/0:23,0:20:43.51:0,44,406	1/1:3,25:28:75.04:686,75,0	1/1:1,21:22:60.03:549,60,0	1/1:1,11:12:33.02:302,33,0	1/1:4,28:32:84.01:759,84,0	1/1:6,19:25:45.01:412,45,0	1/1:4,16:20:51.02:465,51,0	1/1:2,18:20:51.01:466,51,0	1/1:1,21:22:60.03:549,60,0	1/1:2,21:23:60.03:549,60,0	1/1:0,20:20:51.03:467,51,0	1/1:3,30:33:84.04:769,84,0	1/1:0,20:20:54.03:494,54,0	1/1:2,21:23:57.03:521,57,0	1/1:2,14:16:39.01:357,39,0	1/1:2,15:17:47.99:429,48,0	1/1:4,28:32:81.02:736,81,0	1/1:2,15:17:39.02:357,39,0	0/0:22,0:22:59.96:0,60,666	0/0:17,1:18:20.41:0,20,465	0/0:11,0:11:30.09:0,30,346	1/1:3,24:27:66.03:604,66,0	1/1:2,21:23:63.02:572,63,0	1/1:3,20:23:51.02:467,51,0	1/1:0,9:9:27.01:247,27,0
chr10	62360916	.	GT	G	6501.10	PASS	AB=0.729;AC=39;AF=0.696;AN=56;BaseQRankSum=6.383;DP=702;FS=5.186;HRun=13;HaplotypeScore=139.7691;InbreedingCoeff=0.7253;MQ=76.28;MQ0=6;MQRankSum=0.562;QD=13.74;ReadPosRankSum=5.203;VQSLOD=3.8317;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,23:32:10.18:365,10,0	0/0:6,0:6:15.02:0,15,146	0/0:66,0:33:28.82:0,29,344	0/0:53,0:33:24.25:0,24,262	1/1:16,17:34:21.19:470,21,0	1/1:5,18:23:44.71:328,45,0	0/1:9,18:27:24.50:271,0,24	0/0:23,0:22:39.53:0,40,375	1/1:6,14:20:35.77:262,36,0	1/1:5,19:25:58.53:412,59,0	1/1:4,16:20:50.70:372,51,0	1/1:1,14:16:40.81:290,41,0	1/1:7,18:26:18.63:338,19,0	1/1:2,12:14:35.78:262,36,0	1/1:6,24:30:42.13:436,42,0	1/1:3,18:21:15.55:277,16,0	0/0:33,0:33:80.94:0,81,755	1/1:3,9:13:22.91:159,23,0	0/1:8,7:16:3.26:133,0,3	1/1:5,27:32:4.62:486,5,0	1/1:5,12:17:26.82:197,27,0	0/0:20,0:23:35.99:0,36,460	0/1:17,2:23:31.04:31,0,307	0/0:23,0:24:8.77:0,9,360	1/1:2,14:16:26.84:197,27,0	1/1:1,22:25:70.08:488,70,0	1/1:7,29:36:83.41:599,83,0	1/1:1,5:6:17.88:129,18,0
chr10	62361013	.	ATTTGTTTGTTTG	A	9445.24	PASS	AB=0.867;AC=33;AF=0.589;AN=56;BaseQRankSum=3.674;DP=551;FS=11.677;HRun=0;HaplotypeScore=213.3407;InbreedingCoeff=0.8490;MQ=60.16;MQ0=1;MQRankSum=-9.035;QD=30.18;ReadPosRankSum=0.683;VQSLOD=3.3458;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:28:13.38:0,13,222	0/0:15,0:15:30.10:0,30,1619	0/0:19,0:12:3.01:0,3,176	0/0:9,0:8:12.03:0,12,403	0/0:15,0:36:59.48:0,59,930	1/1:2,15:17:39.01:967,39,0	1/1:12,4:16:12.04:356,12,0	0/0:30,0:29:39.11:0,39,1424	1/1:8,0:20:27.08:648,27,0	1/1:10,4:14:12.04:415,12,0	1/1:12,7:19:20.86:307,21,0	1/1:10,7:17:11.99:365,12,0	1/1:15,5:20:27.07:714,27,0	1/1:10,7:17:14.97:351,15,0	1/1:15,5:20:18.02:451,18,0	1/1:16,8:24:33.07:855,33,0	0/0:28,0:28:55.07:0,55,2827	0/1:11,2:13:7.73:218,0,8	1/1:8,7:16:24.06:671,24,0	1/1:15,6:21:17.89:287,18,0	0/0:7,0:7:0.88:0,1,2	0/0:9,0:22:48.16:0,48,1260	0/0:9,0:19:31.54:0,32,607	0/0:6,0:24:54.19:0,54,1383	1/1:16,8:24:27.01:678,27,0	1/1:19,10:29:42.14:1280,42,0	1/1:12,6:18:18.06:570,18,0	1/1:3,5:8:9.03:311,9,0
chr10	62366705	.	C	CT	539.14	PASS	AB=0.875;AC=11;AF=0.196;AN=56;BaseQRankSum=-3.790;DP=607;FS=4.369;HRun=13;HaplotypeScore=71.3338;InbreedingCoeff=-0.0263;MQ=70.49;MQ0=3;MQRankSum=-1.345;QD=2.81;ReadPosRankSum=-1.584;VQSLOD=-0.3226;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:50,1:51:67.66:0,68,609	1/1:2,3:5:6.01:56,6,0	0/1:21,0:15:7.02:7,0,49	0/1:21,0:15:11.17:11,0,20	0/0:29,1:31:8.65:0,9,188	0/0:25,1:26:43.58:0,44,445	0/0:17,1:18:10.77:0,11,219	0/1:12,14:26:9.88:249,0,10	0/0:5,0:16:16.26:0,16,47	0/1:23,3:27:13.60:14,0,289	0/0:25,1:26:28.56:0,29,337	0/0:14,0:16:39.62:0,40,250	0/0:24,3:27:25.64:0,26,321	0/0:17,2:20:15.32:0,15,233	0/0:27,0:27:65.41:0,65,452	0/0:15,0:16:40.69:0,41,270	0/1:12,17:27:29.65:292,0,30	0/0:16,1:17:13.69:0,14,236	0/1:17,1:18:16.13:16,0,49	0/0:26,1:27:37.53:0,38,403	0/1:12,1:13:4.09:4,0,119	0/0:15,1:17:6.89:0,7,182	0/0:21,0:21:40.58:0,41,269	0/1:11,1:12:1.07:1,0,138	0/1:15,2:17:25.97:26,0,135	0/0:21,0:21:35.58:0,36,246	0/0:31,1:33:42.46:0,42,424	0/0:3,0:4:2.61:0,3,20
chr10	62368977	.	C	CTTGTTTGTTTGTTTGT	41804.79	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-1.685;DP=626;FS=5.258;HRun=0;HaplotypeScore=248.4691;InbreedingCoeff=0.8981;MQ=59.23;MQ0=2;MQRankSum=-9.156;QD=79.78;ReadPosRankSum=-1.250;VQSLOD=4.1004;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:17:9.03:461,9,0	1/1:0,0:5:15.05:245,15,0	0/0:20,0:15:18.03:0,18,607	0/0:18,0:16:17.81:0,18,388	1/1:35,0:41:43.70:2474,44,0	1/1:20,15:36:60.21:4145,60,0	1/1:19,2:23:30.10:2105,30,0	1/1:29,0:29:48.14:960,48,0	1/1:8,0:21:30.10:489,30,0	1/1:23,13:38:69.68:4615,70,0	1/1:9,8:18:33.11:2119,33,0	1/1:17,4:21:27.09:1875,27,0	1/1:10,9:23:27.09:2025,27,0	1/1:7,4:11:18.06:1260,18,0	1/1:23,9:32:45.15:3211,45,0	1/1:21,1:28:36.12:2343,36,0	1/1:5,0:9:9.03:147,9,0	1/1:11,3:15:21.07:1417,21,0	1/1:14,3:18:27.09:1611,27,0	1/1:24,8:33:45.11:2716,45,0	1/1:6,0:6:9.03:523,9,0	0/0:31,0:31:57.67:0,58,2308	0/0:28,0:29:69.24:0,69,2766	0/0:4,0:4:9.03:0,9,399	1/1:19,5:24:30.10:2096,30,0	1/1:25,11:36:45.15:3021,45,0	1/1:30,3:33:27.09:1720,27,0	1/1:7,0:7:3.01:228,3,0
chr10	62373942	.	GACAC	G	1051.05	PASS	AB=0.894;AC=32;AF=0.640;AN=50;BaseQRankSum=-0.476;DP=330;FS=26.468;HRun=0;HaplotypeScore=79.0342;InbreedingCoeff=0.3496;MQ=48.34;MQ0=15;MQRankSum=-2.865;QD=7.25;ReadPosRankSum=2.692;VQSLOD=0.2235;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:16.86:0,17,122	./.	./.	0/0:58,0:20:5.87:0,6,35	0/0:7,0:7:5.59:0,6,26	1/1:7,1:8:3.01:45,3,0	1/1:9,2:11:11.99:153,12,0	0/1:18,0:16:21.32:32,0,21	0/0:7,0:8:6.02:0,6,96	0/1:9,0:10:5.35:93,0,5	1/1:5,0:5:2.84:14,3,0	1/1:6,3:10:9.02:117,9,0	1/1:3,1:4:3.01:45,3,0	1/1:6,1:7:6.01:71,6,0	1/1:3,2:5:3.01:45,3,0	1/1:4,2:7:9.03:115,9,0	0/0:10,0:15:24.08:0,24,451	0/1:6,1:9:31.43:63,0,31	0/1:10,1:11:13.95:35,0,14	1/1:4,1:4:6.02:86,6,0	1/1:13,0:13:5.54:25,6,0	./.	1/1:4,0:4:2.37:8,2,0	0/0:11,0:12:27.09:0,27,581	1/1:5,1:9:12.02:125,12,0	0/0:6,0:6:2.50:0,2,9	1/1:3,1:5:8.51:91,9,0	1/1:3,1:4:3.01:46,3,0
chr10	62373974	.	CACACAT	C	2398.60	PASS	AB=1.000;AC=39;AF=0.696;AN=56;BaseQRankSum=-4.327;DP=389;FS=8.812;HRun=0;HaplotypeScore=87.7744;InbreedingCoeff=0.5270;MQ=44.50;MQ0=23;MQRankSum=-0.468;QD=10.04;ReadPosRankSum=-4.090;VQSLOD=-0.1197;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:17.50:0,18,135	1/1:3,0:3:2.97:20,3,0	0/0:24,0:3:2.35:0,2,53	0/0:32,0:7:14.89:0,15,117	0/0:15,0:14:5.74:0,6,31	1/1:11,0:11:8.61:92,9,0	1/1:13,0:13:9.03:177,9,0	1/1:20,0:16:26.12:261,26,0	0/0:3,0:11:5.75:0,6,95	0/1:9,0:8:22.63:88,0,23	1/1:7,0:7:2.99:24,3,0	1/1:15,0:15:19.94:226,20,0	1/1:5,0:5:8.82:98,9,0	1/1:1,9:10:6.02:135,6,0	1/1:7,0:7:3.01:65,3,0	1/1:11,0:11:11.72:163,12,0	0/0:26,0:26:24.08:0,24,536	0/1:12,0:12:22.84:108,0,23	1/1:15,0:15:27.72:209,28,0	1/1:17,0:16:10.25:125,10,0	1/1:22,0:20:26.48:152,26,0	1/1:9,0:9:2.94:18,3,0	0/1:14,0:14:3.38:82,0,3	0/0:12,0:12:13.15:0,13,655	1/1:14,1:15:14.68:193,15,0	1/1:11,0:11:18.70:88,19,0	1/1:8,0:8:17.49:145,17,0	1/1:5,0:5:8.99:109,9,0
chr10	62373978	.	CAT	C	1999.45	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-1.714;DP=388;FS=4.994;HRun=0;HaplotypeScore=76.7766;InbreedingCoeff=0.6637;MQ=45.56;MQ0=22;MQRankSum=-0.338;QD=6.97;ReadPosRankSum=-2.241;VQSLOD=2.3381;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,28:29:6.16:212,6,0	1/1:3,0:3:2.97:20,3,0	0/0:25,0:5:8.19:0,8,92	0/0:26,0:6:14.90:0,15,117	1/1:1,14:14:6.02:90,6,0	1/1:13,0:13:11.35:59,11,0	1/1:16,0:16:8.89:60,9,0	1/1:5,15:16:26.36:263,26,0	0/0:10,0:10:3.25:0,3,12	1/1:9,0:8:12.90:75,13,0	1/1:8,0:8:2.99:24,3,0	1/1:15,0:15:19.77:106,20,0	1/1:6,0:6:11.56:65,12,0	1/1:10,0:10:5.95:42,6,0	1/1:9,0:9:8.55:44,9,0	1/1:12,0:12:11.83:80,12,0	0/0:28,0:28:22.72:0,23,172	1/1:10,0:10:2.70:103,3,0	1/1:14,0:14:26.54:162,27,0	1/1:17,0:16:10.66:61,11,0	1/1:22,0:20:26.01:152,26,0	1/1:9,0:9:2.94:18,3,0	1/1:12,2:14:17.85:146,18,0	0/0:12,0:12:12.66:0,13,218	1/1:14,0:14:14.72:99,15,0	1/1:8,0:8:18.13:86,18,0	1/1:9,0:9:20.31:114,20,0	1/1:5,0:5:11.76:77,12,0
chr10	62373980	.	TAC	T	2675.98	PASS	AB=1.000;AC=37;AF=0.685;AN=54;BaseQRankSum=-3.340;DP=383;FS=2.607;HRun=0;HaplotypeScore=74.2640;InbreedingCoeff=0.6464;MQ=46.14;MQ0=22;MQRankSum=-3.299;QD=10.45;ReadPosRankSum=-0.032;VQSLOD=3.3315;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:29:17.59:108,0,18	0/0:3,0:3:0:0,0,0	0/0:23,0:5:3.23:0,3,166	0/0:24,0:6:18.06:0,18,252	1/1:15,0:14:5.98:48,6,0	1/1:12,1:13:15.05:182,15,0	1/1:2,14:16:9:92,9,0	0/0:21,0:17:20.90:0,21,85	0/0:9,0:10:5.73:0,6,46	1/1:4,4:7:11.40:119,11,0	./.	1/1:11,4:15:21.06:242,21,0	1/1:5,1:6:12.04:141,12,0	1/1:10,1:11:8.91:75,9,0	1/1:7,2:9:9.03:110,9,0	1/1:9,3:12:12.03:132,12,0	0/0:5,0:27:24.02:0,24,239	1/1:10,2:12:18:202,18,0	1/1:13,1:14:36.06:422,36,0	1/1:3,13:15:5.93:69,6,0	1/1:22,0:20:21.06:256,21,0	0/1:5,0:9:0:0,0,0	0/1:14,0:14:2.35:15,0,2	0/0:6,0:12:27.49:0,27,259	1/1:10,4:14:17.83:158,18,0	1/1:0,7:7:18.06:220,18,0	1/1:8,1:9:15.04:174,15,0	1/1:4,1:5:8.51:82,9,0
chr10	62374260	.	TTCTCTCTTCTCTCTCTCTCTCTCTCTC	T	6554.92	PASS	AB=1.000;AC=41;AF=0.759;AN=54;BaseQRankSum=-1.817;DP=353;FS=68.254;HRun=0;HaplotypeScore=120.5633;InbreedingCoeff=0.4485;MQ=37.51;MQ0=40;MQRankSum=0.528;QD=27.31;ReadPosRankSum=2.226;VQSLOD=0.4101;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:6,0:3:3.01:81,3,0	./.	0/0:37,0:11:18.06:0,18,299	0/0:51,0:12:27.04:0,27,459	1/1:6,0:5:8.96:116,9,0	1/1:7,0:5:15.05:442,15,0	1/1:18,0:8:12.04:273,12,0	1/1:20,0:19:33.02:399,33,0	0/0:3,0:3:3.01:0,3,71	1/1:11,0:7:18.06:346,18,0	1/1:2,8:10:5.98:100,6,0	1/1:12,0:8:21.07:518,21,0	1/1:12,0:6:12.04:475,12,0	1/1:13,0:9:21.07:606,21,0	1/1:2,15:17:3.01:184,3,0	1/1:2,10:10:6.02:428,6,0	0/1:18,0:15:87.39:87,0,921	0/1:7,0:4:41:75,0,41	1/1:6,7:11:19.56:447,20,0	1/1:4,0:4:9.02:180,9,0	1/1:14,0:13:24.08:425,24,0	0/0:8,0:9:6.02:0,6,235	0/0:7,0:5:6.02:0,6,116	0/1:10,0:9:26.12:26,0,266	1/1:4,0:3:3.01:38,3,0	1/1:13,0:12:33.11:846,33,0	1/1:7,0:4:8.73:311,9,0	1/1:6,0:4:9.03:152,9,0
chr10	62374266	.	CT	C	3845.01	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=4.312;DP=337;FS=44.073;HRun=2;HaplotypeScore=44.0205;InbreedingCoeff=0.5132;MQ=35.05;MQ0=47;MQRankSum=1.257;QD=15.20;ReadPosRankSum=2.997;VQSLOD=0.9204;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,4:4:3.01:38,3,0	1/1:2,4:2:0.47:1,0,0	0/0:36,1:11:17.84:0,18,231	0/0:47,0:11:27.04:0,27,331	1/1:0,5:4:7.84:80,8,0	1/1:2,6:5:15.05:190,15,0	1/1:5,9:4:12.04:152,12,0	1/1:2,14:15:33.10:419,33,0	1/1:0,5:5:3.01:36,3,0	1/1:0,10:6:18.06:229,18,0	1/1:8,0:8:1.25:3,1,0	1/1:1,10:7:21.07:266,21,0	1/1:0,10:4:12.04:152,12,0	1/1:3,10:9:20.99:266,21,0	1/1:15,0:15:3.01:38,3,0	1/1:13,0:10:5.49:24,5,0	1/1:3,14:14:30.01:332,30,0	1/1:5,3:5:6.02:76,6,0	1/1:11,0:8:17.31:158,17,0	1/1:0,3:3:9.03:114,9,0	1/1:1,12:12:24.05:288,24,0	1/1:8,0:8:5.75:40,6,0	1/1:7,0:5:5.93:55,6,0	1/1:3,7:11:17.99:202,18,0	1/1:1,3:3:3.01:38,3,0	1/1:0,12:11:33.11:420,33,0	1/1:2,5:4:8.87:114,9,0	1/1:4,4:4:9.03:114,9,0
chr10	62374267	.	T	TC	3747.85	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=3.380;DP=339;FS=49.380;HRun=1;HaplotypeScore=47.9199;InbreedingCoeff=0.4918;MQ=35.05;MQ0=47;MQRankSum=0.881;QD=14.47;ReadPosRankSum=2.601;VQSLOD=0.4470;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,0:4:3.01:38,3,0	1/1:5,1:2:0.47:1,0,0	0/0:35,0:10:17.84:0,18,231	0/0:45,0:11:27.04:0,27,331	1/1:5,0:4:7.57:79,8,0	1/1:7,1:5:15.05:190,15,0	1/1:9,5:4:12.04:152,12,0	1/1:19,0:18:38.67:445,39,0	1/1:7,0:7:2.74:37,3,0	1/1:10,0:6:18.06:229,18,0	1/1:8,0:8:1.25:3,1,0	1/1:11,0:7:21.07:266,21,0	1/1:10,0:4:12.04:152,12,0	1/1:11,1:8:21.07:266,21,0	1/1:15,0:15:3.01:38,3,0	1/1:11,2:10:3.63:14,4,0	1/1:17,0:14:23.63:237,24,0	1/1:8,1:6:2.54:71,3,0	1/1:11,0:8:16.73:152,17,0	1/1:3,0:3:9.03:114,9,0	1/1:13,0:12:24.04:287,24,0	1/1:2,7:9:6.01:76,6,0	1/1:1,6:5:5.93:55,6,0	1/1:11,1:11:17.89:159,18,0	1/1:3,1:3:3.01:38,3,0	1/1:12,0:11:33.11:420,33,0	1/1:5,2:4:8.83:114,9,0	1/1:8,0:4:9.03:114,9,0
chr10	62374912	.	G	GT	895.16	PASS	AB=0.962;AC=5;AF=0.089;AN=56;BaseQRankSum=3.660;DP=630;FS=0.000;HRun=7;HaplotypeScore=89.0173;InbreedingCoeff=0.7651;MQ=60.07;MQ0=7;MQRankSum=-1.826;QD=8.95;ReadPosRankSum=0.003;VQSLOD=1.0858;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:16,4:18:38.43:408,38,0	0/0:10,0:10:20.40:0,20,180	0/0:47,0:13:17.55:0,18,169	0/1:47,0:16:22.59:23,0,76	1/1:21,8:28:55.64:594,56,0	0/0:16,0:16:31.15:0,31,339	0/0:25,0:25:48.01:0,48,450	0/0:28,0:26:31.33:0,31,411	0/0:15,0:15:41.90:0,42,390	0/0:27,0:28:79.12:0,79,715	0/0:22,0:22:25.84:0,26,420	0/0:19,1:20:23.01:0,23,243	0/0:18,0:18:47.78:0,48,434	0/0:25,0:25:49.84:0,50,533	0/0:14,1:15:33.57:0,34,307	0/0:23,0:23:55.48:0,55,483	0/0:29,0:29:41.02:0,41,361	0/0:22,0:22:54.15:0,54,450	0/0:13,0:13:31.49:0,31,275	0/0:29,0:29:74.39:0,74,692	0/0:7,0:7:17.60:0,18,173	0/0:9,0:9:17.91:0,18,157	0/0:14,0:14:30.94:0,31,265	0/0:20,0:20:35.13:0,35,329	0/0:24,0:23:44.79:0,45,446	0/0:29,0:29:80.80:0,81,762	0/0:31,0:31:89.92:0,90,825	0/0:10,0:10:16.76:0,17,157
chr10	62375426	.	TC	T	11226.82	PASS	AB=0.799;AC=54;AF=0.964;AN=56;BaseQRankSum=-6.585;DP=378;FS=35.653;HRun=1;HaplotypeScore=54.1765;InbreedingCoeff=-0.0439;MQ=89.64;MQ0=3;MQRankSum=-5.314;QD=29.70;ReadPosRankSum=3.674;VQSLOD=2.7722;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,20:20:57.15:774,57,0	1/1:0,2:2:6.02:84,6,0	0/1:35,15:31:99:528,0,197	0/1:32,8:24:99:246,0,121	1/1:0,10:10:30.05:395,30,0	1/1:0,11:11:24.08:334,24,0	1/1:0,11:11:30.10:419,30,0	1/1:0,20:20:60.16:817,60,0	1/1:0,4:4:12.04:167,12,0	1/1:1,17:18:51.15:691,51,0	1/1:3,6:9:21.03:271,21,0	1/1:0,11:11:30.10:418,30,0	1/1:0,8:8:21.07:293,21,0	1/1:0,7:7:18.06:250,18,0	1/1:0,9:9:27.05:355,27,0	1/1:0,9:9:21.07:294,21,0	1/1:0,12:12:27.09:376,27,0	1/1:0,15:15:39.13:545,39,0	1/1:0,7:7:21.05:261,21,0	1/1:0,8:8:24.08:334,24,0	1/1:0,15:15:33.11:461,33,0	1/1:0,9:9:27.05:354,27,0	1/1:0,19:19:51.13:684,51,0	1/1:0,8:8:18.06:251,18,0	1/1:0,15:15:33.11:460,33,0	1/1:0,12:12:36.12:494,36,0	1/1:1,10:11:33.05:420,33,0	1/1:0,6:6:18.06:251,18,0
chr10	62375631	.	T	TG	330.73	PASS	AB=0.652;AC=18;AF=0.750;AN=24;BaseQRankSum=-1.741;DP=209;FS=0.000;HRun=1;HaplotypeScore=36.3618;InbreedingCoeff=0.3226;MQ=29.35;MQ0=145;MQRankSum=-1.741;QD=3.41;ReadPosRankSum=-1.044;VQSLOD=-0.5846;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	1/1:5,1:2:0.31:1,0,0	./.	./.	0/0:7,7:8:0:0,0,1	./.	0/0:9,0:1:3.01:0,3,38	./.	./.	1/1:3,5:5:15.05:238,15,0	1/1:7,10:10:0.34:1,0,0	./.	./.	./.	./.	./.	./.	./.	./.	1/1:8,0:4:3.01:35,3,0	./.	0/1:6,6:6:0.02:2,0,0	0/1:6,8:8:0.66:1,0,1	./.	1/1:6,7:8:2.40:4,2,0	1/1:7,1:1:3.01:48,3,0	1/1:0,1:1:3.01:35,3,0	1/1:3,3:3:3.95:46,4,0
chr10	62376077	.	CT	C	2812.01	PASS	AB=0.786;AC=43;AF=0.935;AN=46;BaseQRankSum=3.106;DP=365;FS=27.324;HRun=2;HaplotypeScore=43.3179;InbreedingCoeff=-0.1392;MQ=20.58;MQ0=224;MQRankSum=-2.779;QD=9.53;ReadPosRankSum=0.294;VQSLOD=-0.4460;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:9,4:3:9.03:117,9,0	1/1:3,2:2:6.02:78,6,0	./.	./.	1/1:6,5:3:3.01:34,3,0	1/1:10,3:2:6.02:78,6,0	0/1:18,3:4:32.81:33,0,39	1/1:19,8:5:15.05:195,15,0	1/1:5,6:5:12.04:155,12,0	1/1:7,4:3:9.03:117,9,0	1/1:6,3:3:6.01:64,6,0	1/1:9,6:7:18.06:229,18,0	1/1:6,8:6:12.04:156,12,0	1/1:3,7:7:15.03:191,15,0	1/1:4,7:5:12.04:155,12,0	1/1:4,8:8:21.07:269,21,0	0/1:9,6:7:68.75:173,0,69	1/1:4,2:2:6.02:78,6,0	1/1:15,4:4:9.03:117,9,0	./.	1/1:14,1:2:3.01:39,3,0	./.	1/1:5,4:4:6.02:74,6,0	0/1:7,3:4:35.87:64,0,36	1/1:4,5:4:3.01:39,3,0	1/1:10,6:5:15.05:193,15,0	1/1:4,9:9:21.07:272,21,0	./.
chr10	62376347	.	A	AGTGTGT	3531.18	PASS	AB=0.583;AC=41;AF=0.820;AN=50;BaseQRankSum=-4.999;DP=504;FS=2.765;HRun=0;HaplotypeScore=108.3464;InbreedingCoeff=0.4060;MQ=67.51;MQ0=24;MQRankSum=1.202;QD=10.54;ReadPosRankSum=-0.010;VQSLOD=2.6665;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:25:1.89:0,2,6	1/1:4,0:9:9.03:130,9,0	./.	./.	1/1:10,0:21:1.20:22,1,0	1/1:12,0:18:3.01:66,3,0	1/1:17,0:17:8.95:115,9,0	1/1:23,0:22:7.58:116,8,0	1/1:16,0:13:6.49:135,6,0	1/1:15,0:14:18.91:203,19,0	1/1:7,2:8:3.01:96,3,0	1/1:5,3:8:3.01:96,3,0	1/1:14,0:12:6.02:109,6,0	1/1:5,6:13:9.03:288,9,0	1/1:11,7:21:2.69:96,3,0	1/1:9,3:14:5.13:132,5,0	1/1:9,0:19:9.03:122,9,0	1/1:15,0:15:9.03:199,9,0	1/1:20,0:18:8.48:183,8,0	1/1:9,5:15:3.01:91,3,0	1/1:13,0:12:18.02:368,18,0	0/0:8,0:13:9.02:0,9,111	0/0:14,0:22:12.04:0,12,166	0/0:13,0:21:9.42:0,9,118	./.	1/1:13,11:25:48.79:798,49,0	1/1:7,5:20:5.58:133,6,0	0/1:2,0:7:14.91:32,0,15
chr10	62378249	.	AC	A	601.45	PASS	AB=0.879;AC=9;AF=0.161;AN=56;BaseQRankSum=6.769;DP=555;FS=4.375;HRun=10;HaplotypeScore=69.6084;InbreedingCoeff=0.0686;MQ=76.31;MQ0=0;MQRankSum=-0.258;QD=3.67;ReadPosRankSum=0.259;VQSLOD=0.0607;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:75.17:0,75,811	0/0:16,0:16:41.67:0,42,298	0/1:16,3:17:43.62:44,0,208	0/1:15,3:17:51.05:51,0,124	0/1:20,3:23:29.47:29,0,383	0/1:16,2:18:16.03:16,0,288	0/0:22,0:22:57.02:0,57,585	0/0:19,0:19:29.69:0,30,211	1/1:3,20:24:61.99:526,62,0	0/0:20,0:20:39.06:0,39,412	0/0:15,0:16:35.14:0,35,422	0/0:13,2:15:10.04:0,10,331	0/0:28,0:28:75.12:0,75,786	0/0:20,1:21:34.12:0,34,597	0/0:17,0:17:42.11:0,42,464	0/0:17,1:18:5.31:0,5,332	0/0:20,0:20:50.52:0,51,352	0/1:13,3:16:61.47:61,0,216	0/0:19,1:20:21.69:0,22,397	0/0:16,1:17:22.05:0,22,427	0/1:18,2:20:10.34:10,0,325	0/0:18,0:18:30.06:0,30,321	0/0:16,0:16:16.64:0,17,376	0/0:24,0:24:66.17:0,66,718	0/0:25,0:25:57.15:0,57,631	0/0:19,2:21:19.07:0,19,439	0/1:23,3:26:5.50:6,0,596	0/0:6,0:6:12.02:0,12,124
chr10	62382468	.	G	GA	369.80	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-5.280;DP=573;FS=0.966;HRun=9;HaplotypeScore=53.3619;InbreedingCoeff=0.9634;MQ=78.64;MQ0=0;MQRankSum=0.262;QD=19.46;ReadPosRankSum=-1.034;VQSLOD=3.4107;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:77.98:0,78,677	0/0:6,0:6:14.99:0,15,130	0/0:19,0:18:32.89:0,33,273	0/0:10,0:10:16.44:0,16,134	0/0:32,0:31:74.95:0,75,650	0/0:29,0:29:80.98:0,81,702	0/0:11,0:11:26.99:0,27,234	0/0:26,0:26:53.94:0,54,465	1/1:3,16:19:42.11:465,42,0	0/0:24,0:24:62.96:0,63,541	0/0:20,0:21:50:0,50,420	0/0:23,0:23:59.99:0,60,521	0/0:18,0:18:44.97:0,45,386	0/0:10,0:10:20.99:0,21,182	0/0:24,0:24:62.98:0,63,547	0/0:14,0:14:35.99:0,36,312	0/0:23,0:23:65.99:0,66,573	0/0:17,0:17:41.95:0,42,358	0/0:21,0:21:22.81:0,23,411	0/0:25,0:25:62.98:0,63,547	0/0:17,0:17:44.99:0,45,391	0/0:17,0:17:47.98:0,48,417	0/0:25,1:26:38.80:0,39,566	0/0:15,0:15:44.99:0,45,390	0/0:24,0:23:56.96:0,57,493	0/0:28,0:28:68:0,68,579	0/0:38,0:36:95.95:0,96,833	0/0:8,0:8:24:0,24,208
chr10	62383831	.	C	CCAAA	16675.50	PASS	AB=0.556;AC=33;AF=0.589;AN=56;BaseQRankSum=-15.878;DP=763;FS=0.687;HRun=0;HaplotypeScore=97.9534;InbreedingCoeff=0.9270;MQ=63.13;MQ0=7;MQRankSum=1.109;QD=38.96;ReadPosRankSum=4.206;VQSLOD=5.0649;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:96.27:0,96,1462	0/0:16,0:16:42.14:0,42,686	0/0:37,0:17:26.56:0,27,320	0/0:35,0:22:45.14:0,45,683	0/0:22,0:22:54.18:0,54,868	0/1:4,15:19:13.82:778,0,14	1/1:4,14:19:33.11:814,33,0	0/0:44,0:43:96.29:0,96,1432	0/0:16,0:16:39.13:0,39,649	1/1:12,20:33:60.19:1319,60,0	1/1:6,17:24:51.05:1136,51,0	1/1:12,15:27:39.13:961,39,0	1/1:3,15:18:30.10:740,30,0	1/1:6,20:26:45.15:1096,45,0	1/1:8,12:23:30.10:724,30,0	1/1:5,11:16:24.08:592,24,0	0/0:38,0:37:87.30:0,87,1430	1/1:5,13:19:24.08:553,24,0	1/1:15,14:31:48.16:1116,48,0	1/1:7,23:31:65.29:1292,65,0	1/1:10,34:44:69.24:1701,69,0	0/0:22,0:22:45.13:0,45,685	0/0:22,0:22:57.19:0,57,943	0/0:39,0:39:96.32:0,96,1540	1/1:2,17:21:36.12:888,36,0	1/1:11,25:34:72.21:1488,72,0	1/1:8,20:30:42.14:1036,42,0	1/1:1,9:10:18.06:444,18,0
chr10	62384683	.	GC	G	1354.38	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.463;DP=556;FS=2.860;HRun=4;HaplotypeScore=53.5857;InbreedingCoeff=0.9975;MQ=81.90;MQ0=0;MQRankSum=-3.165;QD=31.50;ReadPosRankSum=0.265;VQSLOD=3.9612;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,22:22:66.20:792,66,0	0/0:9,0:9:21.07:0,21,294	0/0:16,0:15:39.12:0,39,522	0/0:16,0:16:33.08:0,33,442	1/1:0,21:21:57.17:684,57,0	0/0:22,0:22:63.21:0,63,882	0/0:21,0:21:51.17:0,51,714	0/0:17,0:17:51.16:0,51,699	0/0:18,0:18:54.18:0,54,756	0/0:24,0:24:72.24:0,72,1009	0/0:15,0:15:45.14:0,45,613	0/0:18,0:18:54.18:0,54,756	0/0:25,0:25:75.25:0,75,1045	0/0:18,0:18:51.17:0,51,712	0/0:23,0:23:69.23:0,69,966	0/0:19,0:19:57.18:0,57,780	0/0:32,0:32:81.27:0,81,1132	0/0:14,0:13:39.13:0,39,545	0/0:17,0:17:51.16:0,51,696	0/0:28,0:28:84.28:0,84,1175	0/0:22,0:22:63.20:0,63,865	0/0:12,0:12:33.11:0,33,461	0/0:23,0:23:60.19:0,60,822	0/0:12,0:12:36.12:0,36,504	0/0:24,0:24:66.22:0,66,923	0/0:24,0:24:72.22:0,72,990	0/0:27,0:27:81.27:0,81,1133	0/0:17,0:17:48.16:0,48,672
chr10	62386601	.	C	CCT	1045.77	PASS	AC=30;AF=0.652;AN=46;BaseQRankSum=-4.204;DP=138;FS=0.000;HRun=0;HaplotypeScore=24.4777;InbreedingCoeff=0.6150;MQ=93.81;MQ0=1;MQRankSum=-5.853;QD=11.75;ReadPosRankSum=4.026;VQSLOD=2.4073;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:3,0:3:2.92:0,3,17	./.	0/0:13,0:10:17.35:0,17,117	0/0:9,0:7:13.44:0,13,67	./.	1/1:10,0:10:25.96:157,26,0	1/1:3,0:3:5.81:34,6,0	0/0:5,0:5:2.74:0,3,12	./.	1/1:6,0:6:14.84:102,15,0	1/1:0,7:7:3.01:49,3,0	1/1:5,0:5:11.84:103,12,0	1/1:8,0:8:16.70:84,17,0	0/0:6,0:6:0.47:0,0,1	1/1:4,0:4:11.64:66,12,0	1/1:5,0:5:5.94:50,6,0	0/0:2,0:2:2.97:0,3,20	1/1:6,0:6:4.45:67,4,0	1/1:1,1:2:3:31,3,0	1/1:9,0:9:10.75:89,11,0	1/1:3,0:3:3:25,3,0	./.	0/0:1,0:1:2.99:0,3,24	0/0:2,0:2:5.93:0,6,40	1/1:6,0:6:14.77:101,15,0	1/1:8,0:8:20.69:155,21,0	1/1:7,0:7:14.43:82,14,0	./.
chr10	62386602	.	C	CT	941.14	PASS	AB=0.500;AC=31;AF=0.674;AN=46;BaseQRankSum=-4.179;DP=130;FS=1.194;HRun=0;HaplotypeScore=21.0615;InbreedingCoeff=0.5750;MQ=95.68;MQ0=1;MQRankSum=-5.320;QD=10.57;ReadPosRankSum=3.376;VQSLOD=3.0291;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:2,0:2:2.92:0,3,17	./.	0/0:13,0:10:3.64:0,4,117	0/0:9,0:7:13.96:0,14,77	./.	1/1:10,0:10:14.36:137,14,0	1/1:3,0:3:5.81:34,6,0	0/0:4,0:4:2.74:0,3,12	./.	1/1:6,0:6:14.84:102,15,0	1/1:7,0:7:2.99:24,3,0	1/1:5,0:5:11.83:83,12,0	1/1:8,0:8:11.32:60,11,0	0/1:0,6:6:0:0,0,0	1/1:4,0:4:11.64:66,12,0	1/1:3,0:3:5.98:50,6,0	0/0:2,0:2:2.97:0,3,20	1/1:6,0:6:4.45:67,4,0	1/1:1,0:1:2.74:12,3,0	1/1:8,0:8:9.83:85,10,0	1/1:3,0:3:3:25,3,0	./.	0/0:1,0:1:2.99:0,3,24	0/0:2,0:2:5.92:0,6,39	1/1:6,0:6:14.77:101,15,0	1/1:7,0:7:20.70:155,21,0	1/1:6,0:6:14.46:82,14,0	./.
chr10	62387435	.	CT	C	8865.75	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-0.048;DP=574;FS=6.003;HRun=11;HaplotypeScore=67.9018;InbreedingCoeff=0.9589;MQ=72.87;MQ0=4;MQRankSum=-0.465;QD=19.61;ReadPosRankSum=4.494;VQSLOD=5.8286;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,22:29:62.90:517,63,0	1/1:0,11:11:29.96:246,30,0	0/0:42,1:25:37.47:0,37,381	0/0:31,0:21:30.03:0,30,294	1/1:6,26:33:45.01:565,45,0	1/1:3,11:14:35.90:290,36,0	1/1:1,14:15:29.96:246,30,0	1/1:7,23:30:68.88:566,69,0	1/1:2,18:20:50.93:419,51,0	1/1:1,22:23:65.91:539,66,0	1/1:2,15:17:44.94:369,45,0	1/1:2,13:15:32.96:271,33,0	1/1:3,22:25:56.93:468,57,0	1/1:4,17:21:50.93:419,51,0	1/1:3,18:21:53.91:440,54,0	1/1:1,18:19:44.94:369,45,0	1/1:7,21:28:56.88:468,57,0	1/1:2,14:16:35.95:296,36,0	1/1:4,11:15:32.93:271,33,0	1/1:3,19:22:24.94:411,25,0	1/1:2,11:13:32.96:271,33,0	0/0:19,1:20:35.48:0,35,569	0/0:10,0:10:23.98:0,24,240	0/0:15,0:17:47.79:0,48,476	1/1:0,17:17:47.93:394,48,0	1/1:1,22:23:62.88:514,63,0	1/1:3,21:24:59.93:493,60,0	1/1:0,1:1:3:25,3,0
chr10	62388026	.	TTTTG	T	2093.98	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=10.370;DP=669;FS=1.819;HRun=0;HaplotypeScore=105.6901;InbreedingCoeff=0.9872;MQ=66.81;MQ0=0;MQRankSum=1.266;QD=24.64;ReadPosRankSum=1.815;VQSLOD=3.7172;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,20:31:56.82:799,57,0	0/0:11,0:11:18.02:0,18,334	0/0:25,0:22:24:0,24,368	0/0:22,0:17:15.19:0,15,361	1/1:11,14:25:48.04:715,48,0	0/0:35,0:35:84.25:0,84,1865	0/0:16,0:16:27.08:0,27,564	0/0:38,0:38:45.14:0,45,974	1/1:9,20:29:45.15:723,45,0	0/0:34,0:34:69.20:0,69,1392	0/0:21,0:21:39.13:0,39,905	0/0:15,0:15:30.10:0,30,717	0/0:20,0:20:45.15:0,45,1039	0/0:28,0:28:66.20:0,66,1472	0/0:28,0:28:63.21:0,63,1466	0/0:19,0:19:45.15:0,45,1077	0/0:37,0:37:72.03:0,72,1427	0/0:19,0:19:45.11:0,45,914	0/0:22,0:22:25.26:0,25,455	0/0:26,0:26:66.23:0,66,1551	0/0:16,0:16:33.07:0,33,686	0/0:15,0:15:24.08:0,24,521	0/0:15,0:15:21.07:0,21,502	0/0:21,0:22:45.15:0,45,1044	0/0:30,0:30:75.26:0,75,1765	0/0:24,0:24:51.15:0,51,1124	0/0:36,0:36:72.17:0,72,1513	0/0:10,0:10:27.09:0,27,630
chr10	62390476	.	A	ATTT	589.45	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-1.206;DP=579;FS=2.516;HRun=7;HaplotypeScore=75.4421;InbreedingCoeff=0.9830;MQ=66.22;MQ0=1;MQRankSum=-1.875;QD=42.10;ReadPosRankSum=0.490;VQSLOD=3.4736;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:72.22:0,72,983	0/0:7,0:7:21.07:0,21,287	0/0:12,0:11:24.06:0,24,311	0/0:9,0:9:21.07:0,21,287	0/0:27,0:27:75.24:0,75,1023	0/0:27,0:27:72.23:0,72,983	0/0:13,0:13:36.11:0,36,491	0/0:35,0:35:90.24:0,90,1169	1/1:2,12:14:33.11:684,33,0	0/0:22,0:22:66.22:0,66,901	0/0:27,0:27:75.22:0,75,1008	0/0:15,0:15:42.14:0,42,573	0/0:27,0:26:69.20:0,69,925	0/0:19,0:19:42.12:0,42,573	0/0:30,0:30:81.25:0,81,1078	0/0:26,0:26:57.17:0,57,778	0/0:30,0:30:75.22:0,75,1006	0/0:22,0:22:54.17:0,54,737	0/0:15,0:15:39.12:0,39,532	0/0:26,0:26:75.24:0,75,1022	0/0:13,0:13:30.10:0,30,409	0/0:7,0:7:21.07:0,21,287	0/0:21,0:21:60.20:0,60,818	0/0:10,0:10:24.07:0,24,328	0/0:21,0:21:57.17:0,57,763	0/0:28,0:28:75.23:0,75,1009	0/0:32,0:32:81.25:0,81,1104	0/0:17,0:17:38.14:0,38,605
chr10	62392263	.	G	GTTGGT	6848.97	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-6.742;DP=855;FS=7.791;HRun=0;HaplotypeScore=164.0817;InbreedingCoeff=0.9579;MQ=75.09;MQ0=5;MQRankSum=1.106;QD=35.67;ReadPosRankSum=-0.939;VQSLOD=4.0941;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:17,32:50:96.33:2675,96,0	1/1:2,6:9:11.65:337,12,0	0/0:49,0:33:12.03:0,12,149	0/0:45,0:33:7.05:0,7,247	1/1:14,16:32:42.09:969,42,0	0/0:33,0:33:72.23:0,72,1274	0/0:29,0:29:39.12:0,39,652	1/1:38,0:38:36.10:700,36,0	1/1:24,0:24:39.13:819,39,0	0/0:22,0:22:51.17:0,51,860	0/0:24,0:24:42.13:0,42,725	0/0:36,0:36:75.24:0,75,1303	0/0:29,0:29:54.19:0,54,978	0/0:33,0:33:69.24:0,69,1248	0/0:33,0:33:60.21:0,60,1076	0/0:28,0:28:60.18:0,60,1034	1/1:16,22:39:48.16:1349,48,0	0/0:18,0:18:36.12:0,36,638	0/0:21,0:21:24.08:0,24,438	0/0:30,0:30:66.23:0,66,1193	0/0:48,0:48:81.28:0,81,1449	0/0:24,0:24:45.11:0,45,784	0/0:27,0:27:66.18:0,66,1133	0/0:31,0:31:75.24:0,75,1328	0/0:23,0:23:57.16:0,57,978	0/0:47,0:47:87.27:0,87,1493	0/0:26,0:26:48.16:0,48,858	0/0:7,0:7:9.03:0,9,164
chr10	62392283	.	T	TTTGGT	5740.69	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-10.712;DP=874;FS=11.835;HRun=0;HaplotypeScore=153.3941;InbreedingCoeff=0.9092;MQ=66.50;MQ0=6;MQRankSum=0.952;QD=28.28;ReadPosRankSum=-1.018;VQSLOD=4.0562;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:53,0:53:93.32:2616,93,0	1/1:9,0:9:11.65:337,12,0	0/0:53,0:33:6.62:0,7,141	0/0:49,0:33:7.04:0,7,247	1/1:40,0:40:39.08:912,39,0	0/0:30,0:30:72.23:0,72,1274	0/0:33,0:33:39.12:0,39,652	1/1:30,8:39:33.06:476,33,0	1/1:25,0:25:3:50,3,0	0/0:29,0:29:51.17:0,51,860	0/0:26,0:26:42.13:0,42,725	0/0:33,0:33:75.24:0,75,1303	0/0:25,0:25:54.19:0,54,978	0/0:32,0:32:69.24:0,69,1248	0/0:29,0:29:60.21:0,60,1076	0/0:32,0:32:60.18:0,60,1034	1/1:37,0:37:48.16:1349,48,0	0/0:22,0:22:36.12:0,36,638	0/0:21,0:21:22.28:0,22,435	0/0:30,0:30:66.23:0,66,1193	0/0:43,0:43:81.28:0,81,1449	0/0:20,0:20:45.15:0,45,784	0/0:28,0:28:66.18:0,66,1133	0/0:35,0:35:75.24:0,75,1328	0/0:30,0:29:57.16:0,57,978	0/0:44,0:44:87.27:0,87,1493	0/0:23,0:23:48.16:0,48,858	0/0:4,0:4:9.03:0,9,164
chr10	62393625	.	ATGATTGAT	A	17438.09	PASS	AB=0.688;AC=33;AF=0.611;AN=54;BaseQRankSum=1.706;DP=796;FS=2.077;HRun=0;HaplotypeScore=225.9604;InbreedingCoeff=0.9170;MQ=62.10;MQ0=0;MQRankSum=-12.572;QD=38.07;ReadPosRankSum=2.556;VQSLOD=4.2307;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:38:33.03:0,33,589	0/0:2,0:11:23.77:0,24,185	0/0:34,0:30:30.10:0,30,851	0/0:27,0:26:33.06:0,33,825	0/0:11,0:28:62.98:0,63,1006	1/1:6,22:28:57.19:1182,57,0	1/1:14,21:35:51.17:947,51,0	0/0:29,0:47:66.02:0,66,675	1/1:6,19:25:45.15:988,45,0	1/1:11,28:40:84.27:1899,84,0	1/1:4,15:19:21.07:441,21,0	1/1:5,22:27:39.13:884,39,0	1/1:10,25:35:66.06:1579,66,0	1/1:10,21:31:54.18:1182,54,0	1/1:13,35:48:84.29:1952,84,0	1/1:5,20:25:40.87:1010,41,0	0/0:6,0:37:74.90:0,75,643	0/1:6,5:11:11.95:143,0,12	1/1:9,13:22:39.12:837,39,0	1/1:12,23:35:57.19:1164,57,0	./.	0/0:26,0:27:63.20:0,63,2309	0/0:26,0:26:63.22:0,63,2265	0/0:24,0:24:57.18:0,57,2197	1/1:4,15:19:36.12:729,36,0	1/1:4,16:20:51.15:1126,51,0	1/1:9,26:35:53.69:1146,54,0	1/1:0,3:3:9.03:229,9,0
chr10	62396638	.	AT	A	270.02	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.831;DP=555;FS=7.002;HRun=10;HaplotypeScore=54.7832;InbreedingCoeff=0.7796;MQ=73.33;MQ0=0;MQRankSum=-1.337;QD=16.88;ReadPosRankSum=0.687;VQSLOD=3.8263;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:63.16:0,63,690	0/0:10,0:10:20.11:0,20,260	0/0:8,0:9:8.97:0,9,123	0/0:9,0:9:14.04:0,14,155	0/0:23,1:24:37.10:0,37,623	0/0:33,0:33:90.20:0,90,970	0/0:19,1:20:22.04:0,22,448	0/0:30,0:30:66.16:0,66,717	1/1:1,15:16:41.99:365,42,0	0/0:20,0:20:57.15:0,57,631	0/0:14,0:14:33.09:0,33,365	0/0:14,0:15:38.94:0,39,412	0/0:18,0:18:48.09:0,48,518	0/0:19,0:19:54.09:0,54,575	0/0:20,1:21:25.08:0,25,505	0/0:23,0:23:60.12:0,60,639	0/0:32,0:32:93.25:0,93,1029	0/0:17,0:17:51.11:0,51,551	0/0:15,0:15:36.10:0,36,398	0/0:16,0:17:47.96:0,48,512	0/0:17,1:18:28.06:0,28,520	0/0:8,0:8:18.05:0,18,199	0/0:16,1:17:19.05:0,19,430	0/0:29,0:29:87.22:0,87,954	0/0:32,1:33:64.19:0,64,936	0/0:22,0:23:62.99:0,63,665	0/0:36,0:36:99:0,99,1075	0/0:4,0:4:3.01:0,3,33
chr10	62398687	.	C	CAAA	1178.38	PASS	AB=0.929;AC=7;AF=0.125;AN=56;BaseQRankSum=3.106;DP=373;FS=0.641;HRun=13;HaplotypeScore=61.1697;InbreedingCoeff=0.5780;MQ=58.72;MQ0=9;MQRankSum=-1.523;QD=14.73;ReadPosRankSum=-2.937;VQSLOD=1.0519;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:23,7:37:66.87:838,67,0	0/0:3,0:5:4.31:0,4,47	0/1:12,0:7:16.17:16,0,73	0/0:6,0:4:4.55:0,5,38	1/1:9,15:26:32.91:386,33,0	0/0:13,0:14:27.80:0,28,295	0/0:11,0:12:20.70:0,21,196	0/0:16,0:15:7.36:0,7,239	1/1:4,0:4:6.02:77,6,0	0/0:7,0:7:12:0,12,129	0/0:11,0:15:8.70:0,9,236	0/0:13,0:13:11.96:0,12,157	0/0:13,0:13:17.81:0,18,178	0/0:12,0:13:29.92:0,30,308	0/0:8,0:8:23.99:0,24,237	0/0:9,0:9:18.01:0,18,194	0/0:20,0:26:45.02:0,45,467	0/0:14,0:18:38.74:0,39,358	0/0:16,0:17:26.86:0,27,317	0/0:11,0:11:20.85:0,21,211	0/0:7,0:9:1.50:0,2,160	0/0:9,0:8:3.67:0,4,61	0/0:9,0:8:14.89:0,15,160	0/0:13,0:13:19.39:0,19,223	0/0:11,0:11:8.81:0,9,96	0/0:14,0:15:26.81:0,27,265	0/0:7,0:7:16.23:0,16,150	0/0:10,0:9:13.42:0,13,144
chr10	62398824	.	AT	A	4217.06	PASS	AB=0.841;AC=45;AF=0.804;AN=56;BaseQRankSum=-2.160;DP=432;FS=5.529;HRun=14;HaplotypeScore=55.7553;InbreedingCoeff=0.6245;MQ=80.25;MQ0=3;MQRankSum=0.511;QD=11.46;ReadPosRankSum=3.112;VQSLOD=4.7127;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:16,19:36:6.99:336,7,0	1/1:1,7:8:20.82:144,21,0	0/1:25,0:17:6:6,0,66	0/0:21,0:14:12.61:0,13,64	1/1:4,8:13:25.75:170,26,0	1/1:2,11:14:28.78:191,29,0	1/1:3,9:13:3.96:163,4,0	1/1:7,13:19:10.78:219,11,0	0/0:12,0:12:21.02:0,21,195	1/1:3,9:12:26.71:184,27,0	1/1:5,13:18:32.55:222,33,0	1/1:6,7:13:17.80:123,18,0	1/1:4,10:14:26.75:185,27,0	1/1:0,9:9:23.77:162,24,0	1/1:1,6:7:14.87:103,15,0	1/1:2,11:13:32.71:226,33,0	1/1:2,30:33:67.49:458,67,0	1/1:3,12:15:32.36:226,32,0	0/1:8,6:16:24.83:123,0,25	1/1:6,11:17:25.30:215,25,0	1/1:2,6:8:14.84:103,15,0	0/0:11,0:11:24:0,24,215	0/0:18,0:19:44.63:0,45,362	0/1:5,1:6:5.58:6,0,93	1/1:6,10:16:35.03:230,35,0	1/1:2,8:12:3.47:131,3,0	1/1:9,11:21:25.80:170,26,0	1/1:0,9:9:17.86:123,18,0
chr10	62399214	.	G	GA	267.14	PASS	AC=2;AF=0.037;AN=54;BaseQRankSum=-3.430;DP=611;FS=3.054;HRun=10;HaplotypeScore=57.7795;InbreedingCoeff=0.8713;MQ=59.64;MQ0=5;MQRankSum=-0.417;QD=13.36;ReadPosRankSum=-0.401;VQSLOD=3.4609;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:98.83:0,99,807	0/0:7,0:8:20.01:0,20,153	0/0:6,0:5:10.05:0,10,74	./.	0/0:37,0:35:98.88:0,99,812	0/0:19,1:20:27.95:0,28,435	0/0:22,0:22:59.92:0,60,492	0/0:22,0:22:51.56:0,52,481	1/1:6,14:19:36.03:361,36,0	0/0:27,1:27:29.36:0,29,426	0/0:27,0:27:80.90:0,81,664	0/0:24,0:24:59.80:0,60,482	0/0:18,0:18:41.39:0,41,329	0/0:26,0:27:61.95:0,62,498	0/0:31,0:31:49.22:0,49,608	0/0:19,0:19:22.17:0,22,387	0/0:22,0:22:62.91:0,63,517	0/0:24,0:24:60.36:0,60,493	0/0:19,0:18:24.32:0,24,318	0/0:18,0:18:44.93:0,45,369	0/0:15,0:15:29.24:0,29,245	0/0:24,0:24:59.91:0,60,492	0/0:33,0:33:89.85:0,90,731	0/0:13,1:14:6.97:0,7,263	0/0:26,0:26:65.88:0,66,538	0/0:28,0:27:67.94:0,68,547	0/0:23,0:22:62.92:0,63,516	0/0:19,0:19:53.91:0,54,443
chr10	62400692	.	C	CT	3120.67	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-10.159;DP=810;FS=0.960;HRun=1;HaplotypeScore=79.8514;InbreedingCoeff=0.9978;MQ=90.45;MQ0=0;MQRankSum=-8.112;QD=39.50;ReadPosRankSum=2.635;VQSLOD=4.3653;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,44:46:99:1961,123,0	0/0:8,0:8:24.08:0,24,334	0/0:31,0:31:83.41:0,83,1161	0/0:35,0:35:92.87:0,93,1242	1/1:0,33:33:84.13:1281,84,0	0/0:19,0:19:54.18:0,54,754	0/0:17,0:17:48.16:0,48,669	0/0:29,0:29:84.26:0,84,1130	0/0:31,0:31:93.29:0,93,1267	0/0:36,0:36:99:0,102,1420	0/0:26,0:26:75.24:0,75,1031	0/0:37,0:37:99:0,108,1452	0/0:37,0:37:99:0,108,1478	0/0:38,0:38:99:0,114,1591	0/0:37,0:37:99:0,108,1458	0/0:28,0:28:84.28:0,84,1173	0/0:25,0:25:72.18:0,72,951	0/0:12,0:12:36.10:0,36,484	0/0:26,0:26:78.23:0,78,1057	0/0:33,0:33:93.30:0,93,1279	0/0:38,0:38:99:0,111,1552	0/0:34,0:34:99:0,102,1390	0/0:22,0:22:60.20:0,60,835	0/0:28,0:28:84.28:0,84,1175	0/0:23,0:23:66.22:0,66,923	0/0:30,0:30:90.29:0,90,1241	0/0:43,0:43:99:0,129,1784	0/0:8,0:8:24.08:0,24,335
chr10	62401823	.	ACTTCTC	A	1675.15	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.138;DP=674;FS=1.456;HRun=0;HaplotypeScore=149.4592;InbreedingCoeff=0.9994;MQ=86.85;MQ0=0;MQRankSum=-8.763;QD=38.96;ReadPosRankSum=-3.894;VQSLOD=3.0108;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,24:25:61.66:1297,62,0	0/0:14,0:14:42.14:0,42,1467	0/0:22,0:22:63.21:0,63,2145	0/0:33,0:32:70.81:0,71,2264	1/1:0,18:18:26.96:500,27,0	0/0:29,0:29:87.27:0,87,2947	0/0:34,0:34:99:0,99,3473	0/0:23,0:23:69.22:0,69,2280	0/0:27,0:27:78.27:0,78,2860	0/0:17,0:17:51.17:0,51,1780	0/0:15,0:15:45.15:0,45,1507	0/0:22,0:22:63.22:0,63,2304	0/0:31,0:31:90.31:0,90,3297	0/0:25,0:25:72.25:0,72,2629	0/0:30,0:30:90.31:0,90,3288	0/0:23,0:23:66.23:0,66,2418	0/0:29,0:29:81.26:0,81,2881	0/0:13,0:13:39.13:0,39,1427	0/0:31,0:31:87.25:0,87,3072	0/0:28,0:28:78.27:0,78,2797	0/0:30,0:30:87.30:0,87,3183	0/0:17,0:17:51.18:0,51,1865	0/0:18,0:18:48.15:0,48,1674	0/0:26,0:26:72.24:0,72,2554	0/0:30,0:30:87.30:0,87,3126	0/0:22,0:21:66.22:0,66,2328	0/0:26,0:25:78.26:0,78,2707	0/0:16,0:16:48.08:0,48,1213
chr10	62403468	.	AC	A	1423.79	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.316;DP=507;FS=0.000;HRun=4;HaplotypeScore=47.4553;InbreedingCoeff=0.9927;MQ=75.39;MQ0=0;MQRankSum=1.004;QD=29.06;ReadPosRankSum=1.814;VQSLOD=3.0196;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,30:30:78.24:934,78,0	0/0:10,0:10:30.10:0,30,420	0/0:13,0:13:27.07:0,27,321	0/0:10,0:10:30.08:0,30,389	1/1:0,19:19:51.16:612,51,0	0/0:26,0:26:78.26:0,78,1090	0/0:17,0:17:51.09:0,51,659	0/0:21,0:21:60.20:0,60,839	0/0:17,0:17:48.15:0,48,656	0/0:24,0:24:72.24:0,72,996	0/0:18,0:18:48.15:0,48,656	0/0:20,0:19:54.18:0,54,754	0/0:6,0:6:18.06:0,18,246	0/0:22,0:22:66.22:0,66,922	0/0:21,0:20:60.20:0,60,839	0/0:17,0:17:51.17:0,51,714	0/0:24,0:24:63.19:0,63,862	0/0:22,0:22:66.22:0,66,924	0/0:23,0:23:66.22:0,66,921	0/0:21,0:21:63.20:0,63,865	0/0:13,0:13:39.11:0,39,528	0/0:15,0:15:45.15:0,45,630	0/0:10,0:10:24.08:0,24,336	0/0:8,0:8:24.06:0,24,317	0/0:17,0:17:48.16:0,48,671	0/0:27,0:27:75.24:0,75,1034	0/0:20,0:19:57.19:0,57,796	0/0:16,0:16:45.09:0,45,559
chr10	62404564	.	T	TA	491.25	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=-4.985;DP=567;FS=6.193;HRun=8;HaplotypeScore=53.1050;InbreedingCoeff=0.7224;MQ=67.61;MQ0=0;MQRankSum=0.238;QD=18.19;ReadPosRankSum=1.557;VQSLOD=3.3260;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:39:0,39,348	0/0:5,0:5:9:0,9,82	0/0:8,0:8:14.55:0,15,104	0/1:9,0:8:1.09:1,0,93	0/0:31,0:31:84.03:0,84,765	0/0:28,0:28:78.02:0,78,709	0/0:15,0:15:32.98:0,33,293	0/0:37,0:37:93.01:0,93,837	1/1:1,17:18:51.15:586,51,0	0/0:26,0:26:66.02:0,66,602	0/0:32,0:32:84.02:0,84,764	0/0:15,0:15:42.02:0,42,384	0/0:21,0:21:63.03:0,63,577	0/0:21,0:21:54.02:0,54,491	0/0:7,0:7:21.01:0,21,192	0/0:13,0:13:30.02:0,30,275	0/0:29,0:29:77.99:0,78,702	0/0:18,0:18:44.89:0,45,388	0/0:19,0:19:50.99:0,51,461	0/0:30,0:30:84:0,84,755	0/0:15,0:15:42:0,42,379	0/0:19,0:19:54.03:0,54,494	0/0:25,0:25:63:0,63,570	0/0:16,0:16:42.01:0,42,381	0/0:25,0:25:75.02:0,75,679	0/0:21,0:21:60.02:0,60,546	0/0:26,0:26:77.98:0,78,694	0/0:24,0:24:65.68:0,66,603
chr10	62407373	.	A	ATT	6971.97	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=-5.966;DP=464;FS=10.419;HRun=11;HaplotypeScore=66.0149;InbreedingCoeff=0.9327;MQ=67.17;MQ0=7;MQRankSum=-0.668;QD=19.69;ReadPosRankSum=0.735;VQSLOD=2.9135;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:2,0:24:54.88:0,55,236	1/1:2,1:5:5.51:52,6,0	0/0:10,0:8:9.46:0,9,75	0/0:10,0:9:17.33:0,17,125	0/0:3,0:20:43.88:0,44,189	1/1:0,0:12:27.45:94,27,0	1/1:3,5:10:20.55:255,21,0	1/1:7,0:30:48.58:194,49,0	1/1:1,9:11:20.55:254,21,0	1/1:8,23:31:60.20:855,60,0	1/1:1,19:24:55.54:691,56,0	1/1:4,9:15:14.02:147,14,0	1/1:4,0:5:14.08:170,14,0	1/1:1,11:13:8.94:129,9,0	1/1:5,9:16:20.56:269,21,0	1/1:5,0:16:23.53:215,24,0	1/1:2,0:33:41.78:216,42,0	1/1:2,9:13:14.41:182,14,0	1/1:6,13:17:41.70:549,42,0	1/1:6,16:23:46.76:617,47,0	1/1:1,4:6:12.04:174,12,0	0/0:11,0:11:26.94:0,27,245	0/0:15,0:15:33.02:0,33,314	0/0:14,0:15:35.76:0,36,332	1/1:3,16:21:49.18:637,49,0	1/1:2,18:21:53.14:676,53,0	1/1:6,15:24:38.58:487,39,0	1/1:4,0:4:11.62:109,12,0
chr10	62410088	.	A	AT	657.80	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-1.357;DP=412;FS=11.874;HRun=10;HaplotypeScore=58.1103;InbreedingCoeff=0.6354;MQ=71.02;MQ0=8;MQRankSum=0.418;QD=17.31;ReadPosRankSum=0.149;VQSLOD=3.2057;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,16:20:39.10:416,39,0	0/0:8,0:8:20.97:0,21,172	0/0:45,1:16:2.14:0,2,146	0/0:45,0:14:10.69:0,11,65	1/1:8,9:18:17.25:359,17,0	0/0:15,1:16:0.85:0,1,214	0/0:8,0:9:23:0,23,178	0/0:22,0:22:46.18:0,46,362	0/0:10,0:10:23.95:0,24,194	0/0:11,0:11:26.97:0,27,222	0/0:12,0:12:23.96:0,24,197	0/0:14,0:14:29.91:0,30,240	0/0:6,0:6:11.98:0,12,99	0/0:12,0:12:17.96:0,18,147	0/0:10,0:10:26.95:0,27,219	0/0:10,0:10:26.96:0,27,222	0/0:25,0:25:47.89:0,48,394	0/0:13,0:13:29.18:0,29,227	0/0:11,0:11:20.96:0,21,172	0/0:23,0:23:47.86:0,48,388	0/0:4,0:3:5.99:0,6,49	0/0:7,0:7:5.94:0,6,49	0/0:5,0:5:14.98:0,15,123	0/0:4,0:3:0.47:0,0,1	0/0:18,0:18:47.93:0,48,394	0/0:13,0:13:17.93:0,18,146	0/0:13,0:13:23.94:0,24,197	0/0:1,0:1:3:0,3,25
chr10	62411168	.	AGACGGGTCTGGAGAGAT	A	1788.71	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.177;DP=776;FS=15.113;HRun=0;HaplotypeScore=342.9657;InbreedingCoeff=0.9989;MQ=85.77;MQ0=0;MQRankSum=-5.419;QD=89.44;ReadPosRankSum=2.583;VQSLOD=2.3090;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,138,9532	0/0:10,0:10:27.09:0,27,1753	0/0:32,0:32:86.08:0,86,4463	0/0:38,0:37:53.08:0,53,4088	0/0:29,0:29:75.26:0,75,5927	0/0:19,0:19:54.19:0,54,3893	0/0:28,0:28:81.26:0,81,5644	0/0:33,0:33:90.31:0,90,6126	1/1:2,18:20:39.13:1884,39,0	0/0:35,0:35:99:0,102,7677	0/0:21,0:21:63.22:0,63,4088	0/0:33,0:33:96.33:0,96,6703	0/0:27,0:27:78.25:0,78,5624	0/0:27,0:27:81.28:0,81,6099	0/0:38,0:38:99:0,114,8712	0/0:28,0:28:78.27:0,78,5312	0/0:25,0:25:72.23:0,72,5333	0/0:19,0:19:54.19:0,54,3988	0/0:25,0:25:66.22:0,66,4235	0/0:36,0:36:99:0,102,7809	0/0:35,0:35:93.32:0,93,6410	0/0:27,0:27:81.23:0,81,5676	0/0:26,0:26:78.27:0,78,5635	0/0:31,0:31:93.23:0,93,6426	0/0:18,0:18:54.13:0,54,3183	0/0:25,0:25:69.24:0,69,5170	0/0:28,0:28:78.27:0,78,5794	0/0:16,0:16:48.15:0,48,3647
chr10	62411509	.	A	AG	1339.53	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=6.604;DP=486;FS=0.557;HRun=1;HaplotypeScore=102.7019;InbreedingCoeff=0.8218;MQ=60.41;MQ0=16;MQRankSum=-3.213;QD=21.61;ReadPosRankSum=-1.395;VQSLOD=3.3033;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:16,2:18:3.13:324,3,0	0/0:9,0:8:0.48:0,0,249	0/0:19,0:10:26.91:0,27,253	0/0:12,0:4:6.86:0,7,93	1/1:25,2:27:43.42:627,43,0	0/0:22,0:22:59.55:0,60,733	0/0:15,0:14:36.07:0,36,435	0/0:22,0:20:60.10:0,60,715	1/1:13,4:15:44.74:520,45,0	0/0:20,0:19:56.39:0,56,693	0/0:16,0:16:42.07:0,42,469	0/0:16,0:16:48.16:0,48,623	0/0:27,0:27:81.24:0,81,1025	0/0:15,0:15:35.73:0,36,465	0/0:19,0:19:57.16:0,57,711	0/0:13,0:12:36.12:0,36,467	0/0:21,0:21:52.92:0,53,605	0/0:11,0:11:30.10:0,30,388	0/0:17,0:17:48.16:0,48,619	0/0:16,0:16:46.39:0,46,587	0/0:8,0:6:18.06:0,18,234	0/0:17,0:17:48.43:0,48,582	0/0:17,0:17:36.58:0,37,458	0/0:13,0:12:22.37:0,22,305	0/0:24,0:23:43.51:0,44,744	0/0:24,0:22:63.20:0,63,810	0/0:21,0:20:57.16:0,57,711	0/0:10,0:8:21.04:0,21,243
chr10	62411510	.	GAAA	G	1651.31	PASS	AB=0.905;AC=5;AF=0.089;AN=56;BaseQRankSum=6.584;DP=490;FS=6.230;HRun=3;HaplotypeScore=119.2246;InbreedingCoeff=0.7151;MQ=60.17;MQ0=16;MQRankSum=-4.296;QD=25.80;ReadPosRankSum=-2.203;VQSLOD=0.0819;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:17,2:19:15.78:370,0,16	0/0:9,0:8:4.22:0,4,495	0/0:18,0:9:26.82:0,27,460	0/0:12,0:4:8.76:0,9,103	1/1:15,13:28:58.97:743,59,0	0/0:22,0:22:62.24:0,62,1335	0/0:15,0:14:39.08:0,39,824	0/0:23,0:21:61.90:0,62,1196	1/1:15,1:15:45.12:668,45,0	0/0:20,0:19:53.02:0,53,1124	0/0:16,0:16:42:0,42,715	0/0:17,0:17:51.17:0,51,1164	0/0:27,0:27:81.26:0,81,1772	0/0:15,0:15:30.57:0,31,811	0/0:19,0:19:57.17:0,57,1293	0/0:13,0:12:36.12:0,36,866	0/0:20,0:20:45.30:0,45,929	0/0:11,0:11:30.10:0,30,685	0/0:16,0:16:48.14:0,48,948	0/0:17,0:17:42.56:0,43,1081	0/0:8,0:6:18.06:0,18,443	0/0:17,0:17:34.15:0,34,984	0/0:18,0:18:21.05:0,21,798	0/0:13,0:12:23.77:0,24,551	0/0:24,0:23:46.61:0,47,1223	0/0:24,0:22:62.24:0,62,1409	0/0:21,0:20:60.16:0,60,1276	0/0:11,0:9:24.04:0,24,357
chr10	62411515	.	AAAG	A	1343.22	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=4.299;DP=486;FS=0.000;HRun=0;HaplotypeScore=122.0076;InbreedingCoeff=0.4802;MQ=59.18;MQ0=19;MQRankSum=-2.577;QD=12.55;ReadPosRankSum=-1.274;VQSLOD=2.6385;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:19,0:18:48.41:211,0,48	0/0:9,0:8:24:0,24,379	0/0:18,0:9:26.91:0,27,412	0/0:10,0:2:4.83:0,5,45	1/1:29,0:29:21.35:441,21,0	0/0:21,0:21:60.89:0,61,1084	0/0:16,0:15:39.11:0,39,740	0/1:21,0:19:33.51:34,0,849	1/1:14,4:16:48.13:679,48,0	0/0:21,0:19:48.64:0,49,904	0/0:12,0:12:22.80:0,23,403	0/0:16,0:16:47.95:0,48,954	0/0:27,0:27:81.18:0,81,1501	0/0:14,0:14:36.08:0,36,661	0/0:18,0:18:53.99:0,54,1082	0/0:14,0:13:39.13:0,39,811	0/1:20,0:20:99:121,0,617	0/0:12,0:12:33.11:0,33,654	0/0:14,0:14:42.14:0,42,793	0/0:19,0:18:52.67:0,53,1018	0/0:9,0:6:18.05:0,18,331	0/0:17,0:17:50.80:0,51,931	0/0:19,0:19:38.85:0,39,718	0/0:14,0:13:23.70:0,24,485	0/0:23,0:22:63.95:0,64,1140	0/0:24,0:22:63:0,63,1257	0/0:21,0:20:60.18:0,60,1150	0/0:11,0:9:24.08:0,24,380
chr10	62411518	.	G	GA	1158.28	PASS	AB=0.973;AC=10;AF=0.179;AN=56;BaseQRankSum=5.388;DP=514;FS=1.143;HRun=3;HaplotypeScore=120.1257;InbreedingCoeff=0.3094;MQ=57.29;MQ0=22;MQRankSum=-0.647;QD=7.11;ReadPosRankSum=-3.564;VQSLOD=-0.5125;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:22,1:22:50.50:178,0,51	0/0:8,0:7:9.95:0,10,149	0/0:17,0:8:21.05:0,21,258	0/1:8,0:2:2.26:2,0,15	1/1:30,0:30:11.54:346,12,0	0/0:21,0:21:59.49:0,59,698	0/0:16,0:15:38.22:0,38,486	0/1:21,0:19:36.13:36,0,462	1/1:18,2:18:48.36:559,48,0	0/1:23,0:21:79.40:79,0,343	0/0:14,0:14:21.20:0,21,210	0/0:17,0:16:48.10:0,48,590	0/0:26,0:26:78.11:0,78,936	0/0:13,0:13:32.91:0,33,384	0/0:16,0:16:47.97:0,48,608	0/0:15,0:14:39.05:0,39,497	0/1:19,3:22:99:101,0,273	0/0:13,0:13:35.97:0,36,431	0/0:16,0:15:29.77:0,30,465	0/0:21,0:20:52.75:0,53,608	0/0:10,0:7:18.03:0,18,202	0/0:21,0:21:50.56:0,51,554	0/0:21,0:21:34.22:0,34,415	0/1:16,0:15:0.18:0,0,222	0/0:28,0:27:36.24:0,36,596	0/0:27,0:25:39.49:0,39,626	0/0:19,0:18:54.18:0,54,731	0/0:12,0:9:23.94:0,24,261
chr10	62411519	.	G	GAA	6440.33	PASS	AB=1.000;AC=40;AF=0.714;AN=56;BaseQRankSum=-10.501;DP=520;FS=39.369;HRun=1;HaplotypeScore=113.8574;InbreedingCoeff=0.2248;MQ=56.97;MQ0=22;MQRankSum=0.031;QD=14.38;ReadPosRankSum=0.070;VQSLOD=-0.0636;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:23:43.93:75,0,44	1/1:8,0:7:14.98:144,15,0	0/0:15,0:7:17.62:0,18,125	0/0:8,0:2:3.59:0,4,10	0/0:30,0:30:14.82:0,15,107	0/1:21,0:21:14.86:211,0,15	1/1:17,0:16:13.57:211,14,0	1/1:22,0:20:56.35:439,56,0	0/0:19,0:17:5.69:0,6,97	1/1:24,0:22:32.98:479,33,0	1/1:2,10:14:20.01:183,20,0	1/1:18,0:17:10.31:271,10,0	0/1:26,0:26:14.60:330,0,15	0/1:13,0:13:3.05:140,0,3	1/1:17,0:17:5.98:163,6,0	0/1:15,0:14:10.83:106,0,11	1/1:24,0:24:7.55:290,8,0	0/1:13,0:13:23.91:110,0,24	1/1:15,0:14:35.61:302,36,0	1/1:21,0:20:41.94:386,42,0	1/1:10,0:7:17.22:138,17,0	1/1:21,0:21:17.21:373,17,0	1/1:21,0:21:38.31:333,38,0	0/1:17,0:16:13.66:202,0,14	1/1:28,0:27:30.57:521,31,0	1/1:2,25:26:68.79:761,69,0	0/1:19,0:18:28.55:170,0,29	1/1:12,0:9:10.07:103,10,0
chr10	62414272	.	T	TA	4418.88	PASS	AB=0.900;AC=35;AF=0.648;AN=54;BaseQRankSum=-8.016;DP=428;FS=0.000;HRun=11;HaplotypeScore=39.4346;InbreedingCoeff=0.8710;MQ=60.68;MQ0=17;MQRankSum=-0.181;QD=16.87;ReadPosRankSum=1.180;VQSLOD=5.1710;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:29:64.66:0,65,482	0/0:10,0:11:22.92:0,23,168	0/1:8,0:6:6.15:6,0,20	./.	0/0:29,0:29:54.87:0,55,406	1/1:3,22:24:51.05:507,51,0	1/1:2,9:11:3.82:220,4,0	0/0:26,2:29:28.27:0,28,383	0/0:4,0:10:12.21:0,12,35	1/1:3,12:16:38.84:355,39,0	1/1:4,14:18:9.83:282,10,0	1/1:1,6:6:15.03:152,15,0	1/1:4,12:14:26.98:253,27,0	1/1:2,6:8:14.98:141,15,0	1/1:2,7:9:21.04:213,21,0	1/1:0,13:14:29.18:319,29,0	0/0:23,2:21:11.38:0,11,268	1/1:5,9:13:11.86:106,12,0	1/1:14,11:21:23.35:230,23,0	1/1:5,15:17:42.01:405,42,0	1/1:1,7:8:18.04:183,18,0	0/0:3,0:3:8.97:0,9,70	0/0:12,0:12:26.86:0,27,207	0/0:8,0:8:20.92:0,21,162	1/1:3,14:16:30.06:305,30,0	1/1:5,12:17:30.05:298,30,0	1/1:2,10:12:24.01:231,24,0	1/1:8,7:14:21.04:213,21,0
chr10	62414834	.	G	GA	634.90	PASS	AB=0.891;AC=9;AF=0.161;AN=56;BaseQRankSum=2.453;DP=394;FS=8.555;HRun=12;HaplotypeScore=50.8582;InbreedingCoeff=0.5095;MQ=66.88;MQ0=8;MQRankSum=-0.339;QD=7.13;ReadPosRankSum=-0.224;VQSLOD=1.1986;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,12:21:31.91:281,32,0	0/0:5,0:5:8.06:0,8,64	0/0:20,0:10:15.45:0,15,98	0/0:18,0:9:2.61:0,3,64	1/1:6,14:20:14.17:287,14,0	0/0:18,0:20:44.05:0,44,299	0/0:14,0:14:35.78:0,36,261	0/0:22,0:22:42.38:0,42,299	1/1:3,10:13:18.03:173,18,0	0/0:17,0:17:38.76:0,39,282	0/0:17,0:17:41.75:0,42,306	0/0:12,0:11:23.85:0,24,175	0/0:9,0:9:17.88:0,18,131	0/0:5,0:5:5.94:0,6,44	0/0:14,0:14:26.82:0,27,197	0/0:6,0:6:4.73:0,5,59	0/0:23,0:23:53.65:0,54,391	0/0:14,0:14:26.80:0,27,197	0/0:11,0:12:34.84:0,35,245	0/0:18,0:16:32.79:0,33,241	0/0:13,0:13:32.80:0,33,239	0/1:6,1:7:20.23:20,0,35	0/0:10,0:11:22.91:0,23,159	0/0:10,0:9:17.86:0,18,131	0/1:18,2:20:12.41:12,0,228	0/0:13,0:14:16.88:0,17,113	0/1:7,1:8:14.28:14,0,73	0/0:11,0:11:29.81:0,30,218
chr10	62415855	.	A	AT	1540.96	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-2.618;DP=614;FS=3.511;HRun=7;HaplotypeScore=58.3494;InbreedingCoeff=0.9933;MQ=64.75;MQ0=2;MQRankSum=0.155;QD=25.26;ReadPosRankSum=3.368;VQSLOD=4.2665;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,32:35:84.26:1015,84,0	0/0:7,0:7:21.03:0,21,203	0/0:22,0:19:44.16:0,44,377	0/0:11,0:9:21.03:0,21,199	1/1:1,25:26:54.16:648,54,0	0/0:23,0:23:60.09:0,60,579	0/0:21,0:21:54.04:0,54,504	0/0:33,0:33:84.09:0,84,807	0/0:14,0:14:42.04:0,42,395	0/0:25,0:25:54.08:0,54,521	0/0:15,0:15:30.03:0,30,284	0/0:32,0:32:81.07:0,81,769	0/0:27,0:27:72.11:0,72,695	0/0:25,0:25:75.07:0,75,709	0/0:18,0:18:48.08:0,48,463	0/0:16,0:16:45.07:0,45,434	0/0:32,0:32:87.14:0,87,840	0/0:37,0:37:85.96:0,86,887	0/0:20,0:20:48.05:0,48,457	0/0:25,0:25:75.07:0,75,714	0/0:18,0:18:51.07:0,51,488	0/0:23,0:23:47.44:0,47,443	0/0:20,0:20:50.92:0,51,489	0/0:23,0:23:54.02:0,54,506	0/0:16,0:16:42.07:0,42,406	0/0:24,0:23:60.08:0,60,573	0/0:18,0:17:45.06:0,45,434	0/0:8,0:7:20.95:0,21,185
chr10	62418535	.	CA	C	17086.03	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=9.006;DP=730;FS=4.617;HRun=5;HaplotypeScore=73.1370;InbreedingCoeff=0.9968;MQ=84.51;MQ0=0;MQRankSum=-5.659;QD=29.92;ReadPosRankSum=2.240;VQSLOD=5.6702;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,44:48:99:1395,123,0	1/1:1,8:9:24.07:272,24,0	0/0:23,0:23:53.72:0,54,689	0/0:22,0:22:51.15:0,51,632	1/1:3,23:26:66.18:748,66,0	1/1:3,22:25:63.18:715,63,0	1/1:0,19:19:51.15:579,51,0	1/1:5,27:32:78.22:884,78,0	0/0:28,0:28:81.24:0,81,1073	1/1:0,31:31:90.24:1010,90,0	1/1:5,27:32:72.20:817,72,0	1/1:1,29:30:78.22:884,78,0	1/1:0,26:26:72.21:817,72,0	1/1:0,23:23:66.19:749,66,0	1/1:1,27:28:81.23:919,81,0	1/1:1,18:19:16.11:572,16,0	1/1:1,18:19:51.15:579,51,0	1/1:0,14:14:39.11:442,39,0	1/1:3,23:26:66.19:748,66,0	1/1:1,29:30:75.21:851,75,0	1/1:0,30:30:81.23:919,81,0	0/0:29,0:29:78.25:0,78,1050	0/0:26,0:26:75.25:0,75,1026	0/0:31,0:31:93.25:0,93,1235	1/1:1,26:27:72.20:817,72,0	1/1:0,28:28:81.21:908,81,0	1/1:0,35:35:99:1157,102,0	1/1:3,11:14:27.08:306,27,0
chr10	62419678	.	TCG	T	1200.22	PASS	AB=0.948;AC=16;AF=0.286;AN=56;BaseQRankSum=9.916;DP=853;FS=17.136;HRun=0;HaplotypeScore=199.4645;InbreedingCoeff=0.2408;MQ=68.20;MQ0=28;MQRankSum=-0.898;QD=3.67;ReadPosRankSum=-4.259;VQSLOD=0.9008;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:26,2:30:11.73:98,12,0	1/1:8,5:14:5.96:206,6,0	0/0:77,1:33:40.22:0,40,567	0/0:117,0:56:20.87:0,21,682	1/1:30,0:27:17.92:138,18,0	0/1:32,0:32:1.79:2,0,595	0/0:32,1:33:59.78:0,60,1021	0/1:12,0:24:18.17:18,0,333	0/0:20,0:21:39.97:0,40,664	0/1:28,0:28:5.96:6,0,713	0/0:15,0:14:22.95:0,23,468	0/1:32,0:32:39.78:40,0,570	0/1:19,0:18:31.09:31,0,374	0/1:21,0:21:33.75:34,0,369	0/0:26,0:24:33.11:0,33,580	0/0:19,1:21:1.91:0,2,323	1/1:30,9:39:14.57:714,15,0	0/1:24,0:24:15.39:15,0,621	0/0:26,0:24:2.66:0,3,836	0/0:15,0:15:20.64:0,21,319	0/0:33,0:33:22.45:0,22,750	0/0:22,0:23:22.20:0,22,249	0/0:16,0:15:26.72:0,27,390	0/0:22,0:21:27.04:0,27,401	0/0:24,0:25:4.93:0,5,550	0/1:30,0:29:67.44:67,0,886	0/0:24,0:23:22.57:0,23,681	0/0:24,0:23:62.93:0,63,1048
chr10	62419736	.	ACTCC	A	692.53	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.992;DP=566;FS=0.000;HRun=0;HaplotypeScore=136.2891;InbreedingCoeff=0.9958;MQ=80.16;MQ0=3;MQRankSum=-3.785;QD=40.74;ReadPosRankSum=0.868;VQSLOD=3.9565;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:54.14:0,54,1315	0/0:10,0:10:30.10:0,30,779	0/0:38,0:29:68.41:0,68,1365	0/0:59,0:42:51.73:0,52,1840	0/0:19,0:19:51.18:0,51,1304	0/0:14,0:14:27.05:0,27,642	0/0:21,0:21:54.18:0,54,1363	0/0:19,0:19:57.20:0,57,1479	1/1:2,15:17:45.15:787,45,0	0/0:24,0:24:63.21:0,63,1590	0/0:13,0:13:39.13:0,39,1012	0/0:16,0:16:45.11:0,45,1065	0/0:19,0:19:33.20:0,33,1293	0/0:18,0:18:51.09:0,51,1199	0/0:20,0:20:54.19:0,54,1403	0/0:14,0:14:42.14:0,42,1091	0/0:25,0:25:63.22:0,63,1548	0/0:18,0:18:36.12:0,36,933	0/0:23,0:23:45.15:0,45,1169	0/0:18,0:18:54.17:0,54,1349	0/0:21,0:21:42.14:0,42,1091	0/0:19,0:19:51.17:0,51,1269	0/0:11,0:11:30.10:0,30,773	0/0:26,0:26:63.22:0,63,1608	0/0:10,0:10:27.05:0,27,624	0/0:23,0:23:66.21:0,66,1619	0/0:10,0:10:30.10:0,30,774	0/0:14,0:14:39.09:0,39,883
chr10	62420089	.	ATTGTT	A	16668.86	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=14.992;DP=636;FS=2.438;HRun=0;HaplotypeScore=130.5585;InbreedingCoeff=0.9792;MQ=74.19;MQ0=2;MQRankSum=-3.810;QD=44.45;ReadPosRankSum=3.295;VQSLOD=5.0135;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,99,2839	0/0:8,0:8:24.08:0,24,681	0/0:20,0:17:5.71:0,6,842	0/0:26,0:21:39.37:0,39,722	0/0:29,0:29:72.25:0,72,2125	1/1:2,11:13:33.11:664,33,0	1/1:4,18:22:38.82:784,39,0	0/0:24,0:24:66.23:0,66,1889	0/0:27,0:27:72.25:0,72,2170	1/1:9,24:33:75.24:1473,75,0	1/1:1,19:20:51.17:1026,51,0	1/1:5,23:28:57.20:1137,57,0	1/1:1,25:26:60.21:1207,60,0	1/1:2,16:17:42.14:845,42,0	1/1:5,23:28:63.22:1267,63,0	1/1:2,25:27:69.24:1388,69,0	0/0:33,0:33:99:0,99,2916	1/1:1,11:12:27.09:543,27,0	1/1:7,15:22:42.10:724,42,0	1/1:5,17:22:45.15:904,45,0	1/1:3,18:21:48.16:966,48,0	0/0:19,0:19:51.18:0,51,1473	0/0:18,0:18:48.15:0,48,1348	0/0:21,0:21:48.16:0,48,1446	1/1:4,20:24:54.19:1086,54,0	1/1:4,12:16:36.12:724,36,0	1/1:5,33:38:84.28:1689,84,0	1/1:0,5:5:12.04:241,12,0
chr10	62422046	.	A	AT	10529.71	PASS	AB=1.000;AC=49;AF=0.875;AN=56;BaseQRankSum=-7.070;DP=606;FS=26.488;HRun=11;HaplotypeScore=64.4705;InbreedingCoeff=0.7780;MQ=68.12;MQ0=0;MQRankSum=0.241;QD=19.68;ReadPosRankSum=2.402;VQSLOD=4.0059;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,1:30:35.23:0,35,454	1/1:1,7:8:18.04:182,18,0	0/1:20,0:15:12.91:13,0,32	0/0:17,0:14:5.15:0,5,84	0/0:24,0:24:62.69:0,63,480	1/1:6,12:18:19.09:358,19,0	1/1:3,16:19:39.08:396,39,0	1/1:4,27:31:72.03:686,72,0	1/1:7,18:25:48.57:487,49,0	1/1:7,16:23:24.86:434,25,0	1/1:3,18:21:21.87:403,22,0	1/1:4,17:22:56.74:545,57,0	1/1:4,18:22:45.09:457,45,0	1/1:2,13:16:30.02:294,30,0	1/1:7,19:26:45.04:446,45,0	1/1:1,25:26:60.08:598,60,0	1/1:1,26:28:62.97:666,63,0	1/1:5,13:18:9.83:281,10,0	1/1:4,16:21:27.70:448,28,0	1/1:4,21:25:30.83:484,31,0	1/1:4,11:16:36.27:335,36,0	1/1:1,13:15:30.05:298,30,0	1/1:4,15:21:16.31:326,16,0	1/1:0,16:16:42.08:426,42,0	1/1:4,14:19:19.22:357,19,0	1/1:6,20:26:60.04:576,60,0	1/1:8,26:35:37.31:699,37,0	1/1:3,14:17:33.07:335,33,0
chr10	62424328	.	G	GCACACA	6478.09	PASS	AB=0.820;AC=36;AF=0.667;AN=54;BaseQRankSum=-2.287;DP=624;FS=7.727;HRun=0;HaplotypeScore=140.7738;InbreedingCoeff=0.5112;MQ=50.62;MQ0=17;MQRankSum=-4.941;QD=15.03;ReadPosRankSum=0.039;VQSLOD=3.6575;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:21:3.01:78,3,0	0/0:10,0:10:9.03:0,9,185	./.	0/0:38,0:14:6.01:0,6,78	1/1:17,0:17:2.95:22,3,0	0/1:9,7:21:43.95:411,0,44	1/1:11,0:18:6.65:112,7,0	0/0:24,0:25:21.01:0,21,252	0/1:18,0:19:30.70:31,0,683	1/1:12,6:24:42.14:950,42,0	0/1:12,0:11:11.96:207,0,12	1/1:12,13:29:14.71:487,15,0	0/1:6,1:13:41.47:126,0,41	1/1:7,2:15:12.04:272,12,0	1/1:15,14:32:24.08:668,24,0	1/1:12,13:27:27.09:792,27,0	0/0:26,0:29:52.26:0,52,935	1/1:9,5:18:19.70:470,20,0	1/1:15,0:11:12.04:269,12,0	1/1:19,2:27:3.96:132,4,0	1/1:30,1:40:12.04:155,12,0	0/0:19,0:20:20.96:0,21,380	0/0:16,0:19:21.06:0,21,357	0/0:19,0:24:54.63:0,55,960	1/1:13,8:29:27.09:674,27,0	1/1:15,4:21:19.28:352,19,0	1/1:8,4:14:5.19:134,5,0	1/1:7,3:10:6.02:136,6,0
chr10	62425813	.	ATAGCATAG	A	27693.58	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=19.726;DP=802;FS=4.541;HRun=0;HaplotypeScore=218.0438;InbreedingCoeff=0.9994;MQ=87.53;MQ0=0;MQRankSum=-20.568;QD=59.56;ReadPosRankSum=3.400;VQSLOD=4.6196;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,129,5317	0/0:11,0:11:27.07:0,27,959	0/0:33,0:33:90.24:0,90,3229	0/0:37,0:37:86.30:0,86,2912	0/0:34,0:34:96.29:0,96,3763	1/1:1,24:25:60.21:1661,60,0	1/1:3,29:32:63.09:1541,63,0	0/0:27,0:27:69.23:0,69,2662	0/0:32,0:32:93.30:0,93,3927	1/1:1,33:34:99:2524,102,0	1/1:5,19:24:48.08:1189,48,0	1/1:0,29:29:78.27:2150,78,0	1/1:2,24:26:57.20:1578,57,0	1/1:3,34:37:83.32:2233,83,0	1/1:1,42:43:99:2977,108,0	1/1:3,32:35:78.27:2148,78,0	0/0:13,0:13:39.13:0,39,1691	1/1:0,11:11:30.06:767,30,0	1/1:2,18:20:54.12:1309,54,0	1/1:1,30:31:81.06:1917,81,0	1/1:3,28:31:23.95:475,24,0	0/0:35,0:35:96.32:0,96,3943	0/0:34,0:34:93.25:0,93,3342	0/0:36,0:36:99:0,108,4613	1/1:1,27:28:51.13:1349,51,0	1/1:1,20:21:54.17:1420,54,0	1/1:4,24:28:66.10:1626,66,0	1/1:0,10:10:30.10:831,30,0
chr10	62426492	.	T	TA	6497.48	PASS	AB=0.571;AC=37;AF=0.661;AN=56;BaseQRankSum=-9.045;DP=451;FS=0.923;HRun=10;HaplotypeScore=43.4050;InbreedingCoeff=0.8858;MQ=60.99;MQ0=22;MQRankSum=0.751;QD=19.99;ReadPosRankSum=4.615;VQSLOD=5.1425;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,21:22:45.11:480,45,0	0/0:10,0:11:29.01:0,29,228	0/0:11,0:10:15.63:0,16,150	0/0:6,0:4:8.99:0,9,73	1/1:1,27:28:72.18:766,72,0	1/1:4,20:23:54.10:563,54,0	1/1:4,4:7:12.03:128,12,0	0/0:34,0:32:77.84:0,78,634	0/0:17,0:17:29.93:0,30,246	1/1:5,12:17:8.40:283,8,0	1/1:9,20:26:23.48:441,23,0	1/1:2,6:8:15.04:160,15,0	1/1:1,6:7:18.04:191,18,0	1/1:1,8:9:21.05:224,21,0	1/1:3,15:18:30.07:320,30,0	1/1:3,12:14:32.98:336,33,0	0/0:25,0:23:64.90:0,65,515	1/1:6,19:22:26.68:514,27,0	1/1:8,13:18:39.10:416,39,0	1/1:2,15:17:20.88:411,21,0	0/1:2,6:8:6.59:142,0,7	0/0:5,0:4:11.99:0,12,99	0/0:9,0:8:20.95:0,21,169	0/0:5,0:6:15.10:0,15,106	1/1:1,10:11:21.05:224,21,0	1/1:9,15:21:38.98:379,39,0	1/1:2,20:21:20.47:423,20,0	1/1:4,3:4:9.49:97,9,0
chr10	62428358	.	ATC	A	1467.22	PASS	AB=0.966;AC=29;AF=0.518;AN=56;BaseQRankSum=11.322;DP=309;FS=56.856;HRun=0;HaplotypeScore=55.2052;InbreedingCoeff=-0.3439;MQ=49.01;MQ0=23;MQRankSum=-4.293;QD=5.71;ReadPosRankSum=3.268;VQSLOD=0.8561;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,5:7:18.04:197,18,0	1/1:1,4:5:14.96:174,15,0	0/1:5,1:5:28.40:28,0,31	0/1:9,0:9:4.82:5,0,73	1/1:7,6:12:29.59:263,30,0	0/1:18,0:12:99:124,0,213	0/1:11,0:11:6.32:6,0,176	1/1:4,4:5:15:157,15,0	0/1:7,1:8:6.10:6,0,207	0/1:16,0:14:69.46:69,0,260	0/1:11,1:11:71.23:71,0,139	0/1:10,0:10:24.87:25,0,161	0/1:10,0:10:35.45:35,0,187	0/1:10,0:8:24.58:25,0,123	0/1:9,2:10:78.76:79,0,118	0/1:9,1:7:33.78:34,0,143	0/1:7,0:7:11.29:78,0,11	0/0:11,0:8:12.04:0,12,176	0/1:19,0:12:28.26:28,0,337	0/0:16,0:12:3.32:0,3,261	1/1:4,0:2:5.05:45,5,0	0/0:7,0:6:17.92:0,18,224	0/1:10,0:10:6.86:7,0,248	0/0:18,0:16:22:0,22,396	0/1:15,0:13:57.09:57,0,249	0/1:14,0:11:17.42:17,0,159	0/1:9,0:7:57.55:58,0,122	0/1:12,0:9:44.64:45,0,118
chr10	62428369	.	A	AGAAAG	2593.55	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=-0.320;DP=302;FS=26.748;HRun=0;HaplotypeScore=69.0508;InbreedingCoeff=0.8102;MQ=53.30;MQ0=12;MQRankSum=0.823;QD=35.05;ReadPosRankSum=-1.973;VQSLOD=1.3735;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,0:10:27.07:444,27,0	1/1:7,0:7:18.01:282,18,0	0/0:8,0:6:8.99:0,9,133	0/0:12,0:10:21.15:0,21,299	1/1:10,1:16:41.75:696,42,0	0/1:16,0:11:11.39:11,0,290	0/0:8,0:8:18.02:0,18,215	1/1:5,10:14:42.12:884,42,0	0/0:8,0:7:18.01:0,18,260	0/0:12,0:11:27.56:0,28,359	0/0:7,0:7:19.83:0,20,226	0/0:9,0:9:21.06:0,21,264	0/0:6,0:6:14.41:0,14,173	0/0:9,0:8:17.96:0,18,195	0/0:11,0:11:32.49:0,32,342	0/0:9,0:6:17.88:0,18,209	1/1:0,6:6:17.99:450,18,0	0/0:6,1:4:0:0,0,0	0/0:15,0:11:32.60:0,33,450	0/0:15,0:11:30:0,30,352	0/0:3,0:2:5.99:0,6,59	0/0:7,0:6:18.02:0,18,304	0/0:12,0:12:33.09:0,33,586	0/0:16,0:15:42.10:0,42,819	0/0:12,0:11:29.97:0,30,359	0/0:14,0:11:30.10:0,30,399	0/0:10,0:8:20.56:0,21,277	0/0:18,0:15:11.35:0,11,244
chr10	62429357	.	T	TA	1426.88	PASS	AB=0.889;AC=17;AF=0.304;AN=56;BaseQRankSum=2.208;DP=618;FS=0.872;HRun=14;HaplotypeScore=78.9970;InbreedingCoeff=0.6361;MQ=67.22;MQ0=6;MQRankSum=0.928;QD=6.73;ReadPosRankSum=-4.073;VQSLOD=1.7617;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,5:10:15:132,15,0	1/1:2,1:13:28.72:163,29,0	0/1:40,0:10:7.05:31,0,7	0/0:49,0:19:1.38:0,1,64	1/1:9,17:28:9.26:259,9,0	0/0:14,0:17:38.60:0,39,228	0/0:10,0:12:25.67:0,26,160	1/1:18,3:43:73.31:419,73,0	0/0:14,0:15:31.53:0,32,198	0/0:31,0:31:43.40:0,43,390	0/0:19,1:22:19.98:0,20,248	0/0:12,0:13:31.57:0,32,198	0/0:20,0:24:49.62:0,50,300	0/0:12,1:13:0.24:0,0,127	0/0:17,1:19:10.23:0,10,176	0/0:15,0:16:5.14:0,5,152	1/1:2,0:16:31.36:160,31,0	0/0:20,0:19:44.19:0,44,284	0/0:16,0:16:29.27:0,29,182	0/0:30,0:30:67.84:0,68,437	0/1:12,1:14:21.33:21,0,141	1/1:5,7:13:5.45:131,5,0	1/1:8,16:25:16.57:259,17,0	0/1:5,2:7:22.21:41,0,22	0/0:23,1:26:33.76:0,34,330	0/0:17,0:20:48.51:0,49,288	0/0:33,0:33:70.73:0,71,458	0/0:28,1:29:41.45:0,41,393
chr10	62431072	.	AT	A	5412.65	PASS	AB=1.000;AC=35;AF=0.625;AN=56;BaseQRankSum=-8.842;DP=522;FS=5.836;HRun=3;HaplotypeScore=71.1629;InbreedingCoeff=0.8681;MQ=74.35;MQ0=5;MQRankSum=-0.617;QD=17.69;ReadPosRankSum=1.002;VQSLOD=4.3469;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:21.81:0,22,90	0/0:6,0:6:17.72:0,18,114	0/0:41,0:23:6.80:0,7,267	0/0:26,1:15:16.47:0,16,164	0/1:22,0:22:6.34:6,0,126	1/1:1,12:13:21.06:246,21,0	1/1:0,16:16:32.99:375,33,0	0/0:29,0:29:78.49:0,78,524	0/0:11,0:11:13.54:0,14,103	1/1:3,15:18:45.97:497,46,0	1/1:2,12:14:29.71:312,30,0	1/1:8,2:10:20.98:208,21,0	1/1:3,15:18:17.51:194,18,0	1/1:2,7:9:15.03:167,15,0	1/1:4,17:21:19.04:309,19,0	1/1:1,23:24:45.13:538,45,0	0/0:38,0:38:99:0,99,606	1/1:1,13:14:24.07:290,24,0	1/1:4,13:19:45.69:452,46,0	1/1:5,15:20:45.65:473,46,0	1/1:2,7:9:12.03:135,12,0	0/0:13,0:13:10.68:0,11,68	0/0:13,0:13:25.77:0,26,149	0/0:16,0:16:20.13:0,20,118	1/1:3,14:17:21.06:247,21,0	1/1:1,23:24:65.87:715,66,0	1/1:4,18:21:16.90:217,17,0	1/1:5,11:16:1.51:34,2,0
chr10	62431074	.	TTA	T	1930.03	PASS	AB=0.938;AC=31;AF=0.554;AN=56;BaseQRankSum=3.857;DP=531;FS=4.332;HRun=0;HaplotypeScore=90.9602;InbreedingCoeff=0.2835;MQ=74.28;MQ0=5;MQRankSum=-0.485;QD=5.22;ReadPosRankSum=3.933;VQSLOD=1.7945;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:33.35:0,33,256	0/0:6,0:6:5.20:0,5,20	0/0:41,0:23:15.82:0,16,373	0/0:27,0:15:13.98:0,14,202	0/0:22,0:22:37.40:0,37,439	0/1:14,1:15:18.20:82,0,18	1/1:17,0:17:7.07:105,7,0	0/1:35,0:35:16.77:17,0,162	0/0:11,0:11:26.93:0,27,272	0/1:18,1:19:15.06:178,0,15	1/1:12,1:13:10.51:128,11,0	0/1:6,5:11:22.52:142,0,23	1/1:17,2:19:7.17:153,7,0	1/1:8,1:9:13.24:81,13,0	0/1:22,1:23:55.61:111,0,56	1/1:23,1:24:39.41:190,39,0	0/1:39,0:39:22.46:22,0,103	1/1:14,0:14:1.48:57,1,0	1/1:19,0:19:9.10:167,9,0	0/1:19,2:21:23.76:165,0,24	1/1:7,1:8:10.42:75,10,0	0/1:11,0:11:3.49:3,0,160	0/0:15,0:15:19.40:0,19,210	0/0:15,1:16:10.88:0,11,258	1/1:14,1:15:18.57:108,19,0	1/1:25,1:26:32.15:286,32,0	1/1:19,0:18:2.72:43,3,0	0/1:13,0:13:1.68:2,0,22
chr10	62431075	.	TA	T	2393.94	PASS	AB=0.905;AC=38;AF=0.679;AN=56;BaseQRankSum=1.432;DP=542;FS=1.961;HRun=15;HaplotypeScore=87.1817;InbreedingCoeff=-0.1126;MQ=74.58;MQ0=5;MQRankSum=1.003;QD=5.06;ReadPosRankSum=7.050;VQSLOD=2.2634;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,19:23:31.58:198,32,0	1/1:0,0:6:10.17:29,10,0	0/0:42,1:23:21.19:0,21,143	0/0:25,0:14:2.82:0,3,50	0/1:5,17:22:6.01:233,0,6	0/1:15,0:15:18.18:52,0,18	1/1:18,0:18:8.66:100,9,0	1/1:5,2:35:57.71:197,58,0	0/1:2,9:11:26.09:108,0,26	0/1:21,0:21:60:60,0,60	0/1:14,0:14:0.73:60,0,1	0/1:12,0:12:19.78:39,0,20	0/1:19,0:19:4.94:60,0,5	0/1:11,0:11:6.61:37,0,7	0/1:24,0:24:58.54:59,0,82	1/1:25,0:25:42.21:169,42,0	1/1:6,0:38:60.51:187,61,0	1/1:14,0:14:2.29:68,2,0	0/1:19,0:19:43.37:75,0,43	0/1:21,0:21:56.36:79,0,56	1/1:8,0:8:10.70:44,11,0	1/1:1,9:11:28.62:179,29,0	0/1:3,10:15:4.57:86,0,5	1/1:4,12:16:28.61:179,29,0	1/1:16,0:16:16.55:67,17,0	1/1:27,0:27:17.69:140,18,0	0/1:19,0:18:7.56:47,0,8	0/1:13,0:13:3.65:4,0,44
chr10	62434788	.	AT	A	1243.18	PASS	AB=0.836;AC=11;AF=0.196;AN=56;BaseQRankSum=-9.860;DP=497;FS=2.243;HRun=13;HaplotypeScore=83.9882;InbreedingCoeff=0.6861;MQ=76.92;MQ0=0;MQRankSum=0.754;QD=8.88;ReadPosRankSum=2.600;VQSLOD=3.2706;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,9:14:26.78:197,27,0	0/1:2,6:8:11.28:92,0,11	0/1:28,2:25:28.22:28,0,115	0/0:14,0:11:9.35:0,9,63	1/1:2,13:16:37.82:269,38,0	0/0:3,0:20:39.80:0,40,201	0/0:2,0:16:34.41:0,34,196	1/1:10,26:38:20.28:506,20,0	0/1:9,0:9:0.87:1,0,149	0/0:3,0:17:37.03:0,37,189	0/0:6,0:22:49.96:0,50,275	0/0:4,0:13:32.68:0,33,167	0/0:0,0:16:31.25:0,31,157	0/0:2,0:12:14.20:0,14,71	0/0:5,0:19:23.20:0,23,116	0/0:3,0:11:22.73:0,23,115	1/1:4,19:25:45.82:318,46,0	0/0:1,0:12:14.20:0,14,72	0/0:9,0:17:32.79:0,33,177	0/0:6,0:17:33.07:0,33,177	0/0:4,0:10:11.62:0,12,71	0/0:3,0:16:39.92:0,40,208	0/0:6,0:19:37.45:0,37,213	0/0:4,0:14:34.40:0,34,191	0/0:5,0:22:32.29:0,32,170	0/0:11,0:21:31.56:0,32,173	0/0:11,0:32:51.44:0,51,289	0/0:3,0:16:28.41:0,28,143
chr10	62434859	.	GA	G	350.63	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.253;DP=567;FS=2.420;HRun=10;HaplotypeScore=64.9615;InbreedingCoeff=0.8500;MQ=77.96;MQ0=0;MQRankSum=-0.468;QD=17.53;ReadPosRankSum=-0.433;VQSLOD=4.0501;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:54.13:0,54,587	0/0:4,0:4:9.02:0,9,100	0/0:19,0:15:13.17:0,13,155	0/0:17,0:16:19.37:0,19,166	0/0:21,0:21:63.16:0,63,689	0/0:20,0:20:48.12:0,48,524	0/0:16,2:17:22.05:0,22,461	0/0:27,1:28:49.07:0,49,723	1/1:2,18:20:33.50:445,33,0	0/0:17,0:17:45.07:0,45,478	0/0:29,1:30:43.13:0,43,697	0/0:19,1:20:28.05:0,28,525	0/0:15,0:15:27.06:0,27,292	0/0:15,0:15:45.12:0,45,498	0/0:19,0:19:51.13:0,51,556	0/0:13,0:13:36.08:0,36,389	0/0:15,1:18:18.73:0,19,400	0/0:20,0:20:51.11:0,51,551	0/0:19,2:21:7.81:0,8,505	0/0:26,0:26:75.14:0,75,814	0/0:13,0:13:33.09:0,33,365	0/0:21,0:21:54.14:0,54,589	0/0:25,1:26:40.12:0,40,664	0/0:16,0:16:39.09:0,39,422	0/0:24,0:24:66.15:0,66,708	0/0:23,0:23:69.18:0,69,755	0/0:45,1:46:77.11:0,77,1267	0/0:17,0:17:36.08:0,36,389
chr10	62435507	.	A	ACGC	5516.71	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=13.160;DP=600;FS=1.289;HRun=0;HaplotypeScore=102.8248;InbreedingCoeff=0.9750;MQ=86.07;MQ0=0;MQRankSum=-6.034;QD=47.56;ReadPosRankSum=-0.608;VQSLOD=6.6175;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,23:28:78.22:1370,78,0	1/1:2,7:9:21.07:423,21,0	0/0:25,0:26:67.46:0,67,1126	0/0:20,0:20:52.99:0,53,859	1/1:1,23:24:51.17:985,51,0	0/0:28,0:28:78.27:0,78,1370	0/0:30,0:30:90.28:0,90,1529	1/1:6,24:32:92.73:1614,93,0	0/0:24,0:24:69.24:0,69,1217	0/0:18,0:18:51.17:0,51,900	0/0:11,0:11:33.10:0,33,544	0/0:26,0:26:78.25:0,78,1343	0/0:26,0:26:78.25:0,78,1342	0/0:15,0:15:45.15:0,45,784	0/0:34,0:34:99:0,99,1738	0/0:22,0:22:66.21:0,66,1136	1/1:3,20:23:10.28:1125,10,0	0/0:26,0:26:78.24:0,78,1319	0/0:13,0:13:39.12:0,39,647	0/0:17,0:17:48.16:0,48,830	0/0:27,0:27:81.26:0,81,1401	0/0:13,0:13:36.12:0,36,634	0/0:13,0:13:39.11:0,39,658	0/0:27,0:27:78.27:0,78,1368	0/0:21,0:21:63.22:0,63,1091	0/0:23,0:23:69.24:0,69,1218	0/0:21,0:21:63.22:0,63,1112	0/0:3,0:3:9.03:0,9,159
chr10	62435509	.	AG	A	2156.73	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=14.517;DP=593;FS=3.026;HRun=2;HaplotypeScore=85.1733;InbreedingCoeff=0.9779;MQ=84.69;MQ0=0;MQRankSum=-5.476;QD=19.79;ReadPosRankSum=0.756;VQSLOD=3.7845;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,23:27:68.17:588,68,0	1/1:1,7:8:20.97:196,21,0	0/0:24,0:24:48.94:0,49,941	0/0:20,0:20:38.35:0,38,622	1/1:2,23:25:53.38:467,53,0	0/0:28,0:28:84.27:0,84,1237	0/0:29,0:29:87.29:0,87,1304	1/1:4,24:28:77.55:607,78,0	0/0:24,0:24:72.24:0,72,1079	0/0:19,0:19:57.18:0,57,836	0/0:11,0:11:33.11:0,33,494	0/0:26,0:26:78.26:0,78,1168	0/0:26,0:26:78.24:0,78,1147	0/0:15,0:15:42.12:0,42,607	0/0:35,0:35:99:0,105,1532	0/0:21,0:21:63.21:0,63,944	1/1:1,20:21:11.81:472,12,0	0/0:24,0:24:72.24:0,72,1079	0/0:14,0:14:42.14:0,42,629	0/0:17,0:17:51.14:0,51,722	0/0:27,0:27:81.26:0,81,1195	0/0:13,0:13:36.11:0,36,521	0/0:14,0:14:39.12:0,39,564	0/0:27,0:27:78.26:0,78,1163	0/0:22,0:22:66.21:0,66,969	0/0:23,0:23:69.23:0,69,1035	0/0:22,0:22:66.21:0,66,968	0/0:3,0:3:9.03:0,9,135
chr10	62436057	.	ATT	A	1786.23	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=4.510;DP=468;FS=2.928;HRun=14;HaplotypeScore=62.4837;InbreedingCoeff=0.9191;MQ=73.36;MQ0=6;MQRankSum=1.298;QD=15.27;ReadPosRankSum=3.503;VQSLOD=2.8520;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,17:24:38.31:360,38,0	1/1:1,9:10:18:166,18,0	0/0:36,0:17:17.58:0,18,149	0/0:25,0:14:2.15:0,2,106	1/1:6,22:28:44.75:406,45,0	0/0:14,0:17:47.11:0,47,561	0/0:10,0:10:24.04:0,24,285	1/1:6,21:27:59.95:540,60,0	1/1:1,5:6:12.01:111,12,0	0/0:19,0:19:42.06:0,42,508	0/0:22,0:26:62.54:0,63,718	0/0:11,0:11:24.07:0,24,321	0/0:21,0:21:51.08:0,51,591	0/0:7,0:8:14.48:0,14,110	0/0:11,0:11:29.98:0,30,378	0/0:11,0:12:32.54:0,33,377	1/1:5,17:22:41.41:388,41,0	0/0:24,0:27:72.63:0,73,791	0/0:19,0:21:50.59:0,51,573	0/0:20,0:20:45.05:0,45,542	0/0:2,0:2:6.02:0,6,84	0/0:8,0:8:19.44:0,19,178	0/0:8,0:9:15.03:0,15,178	0/0:12,0:12:27.08:0,27,350	0/0:14,0:14:26.10:0,26,313	0/0:19,0:19:51.11:0,51,621	0/0:16,0:18:35.49:0,35,382	0/0:5,0:5:15:0,15,155
chr10	62436703	.	CAGTA	C	3871.61	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-0.004;DP=704;FS=4.332;HRun=0;HaplotypeScore=137.6084;InbreedingCoeff=0.9765;MQ=94.08;MQ0=1;MQRankSum=-5.436;QD=46.65;ReadPosRankSum=4.154;VQSLOD=4.5598;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,53:54:99:2563,135,0	0/0:4,0:4:12.04:0,12,324	0/0:39,0:39:99:0,113,2877	0/0:23,0:23:65.81:0,66,1691	1/1:3,25:28:69.24:1308,69,0	0/0:23,0:23:69.24:0,69,1861	0/0:16,0:16:45.15:0,45,1165	0/0:40,0:40:99:0,108,2789	0/0:27,0:27:81.28:0,81,2156	0/0:32,0:32:96.33:0,96,2570	0/0:22,0:22:63.22:0,63,1682	0/0:23,0:23:66.23:0,66,1741	0/0:24,0:24:69.24:0,69,1859	0/0:30,0:30:84.29:0,84,2262	0/0:21,0:21:60.15:0,60,1502	0/0:18,0:18:51.16:0,51,1322	0/0:18,0:18:51.15:0,51,1315	0/0:26,0:26:78.27:0,78,2085	0/0:24,0:24:66.20:0,66,1723	0/0:26,0:26:78.25:0,78,2000	0/0:21,0:21:63.22:0,63,1701	0/0:26,0:26:72.25:0,72,1944	0/0:22,0:22:63.22:0,63,1661	0/0:25,0:25:69.24:0,69,1863	0/0:20,0:20:60.21:0,60,1619	0/0:39,0:39:99:0,108,2870	0/0:27,0:27:81.28:0,81,2180	0/0:5,0:5:15.05:0,15,365
chr10	62439976	.	CTT	C	793.92	PASS	AB=0.733;AC=30;AF=0.682;AN=44;BaseQRankSum=2.543;DP=107;FS=7.839;HRun=3;HaplotypeScore=69.6923;InbreedingCoeff=0.3438;MQ=43.55;MQ0=6;MQRankSum=-1.752;QD=13.02;ReadPosRankSum=0.619;VQSLOD=0.0350;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,3:3:8.92:68,9,0	./.	./.	0/0:6,0:2:3:0,3,28	1/1:0,3:3:2.37:8,2,0	./.	1/1:3,1:2:3.01:44,3,0	./.	1/1:0,1:1:3.01:45,3,0	1/1:0,1:1:3.01:45,3,0	./.	1/1:0,4:4:4.51:85,5,0	1/1:0,4:4:9.03:131,9,0	1/1:1,4:5:11.25:133,11,0	1/1:3,2:5:8.91:61,9,0	1/1:0,4:4:0.76:50,1,0	0/0:4,0:1:2.74:0,3,12	0/1:1,0:2:4.04:4,0,5	0/0:3,0:2:3.56:0,4,13	0/1:3,1:3:0:0,0,0	0/0:9,1:10:2.99:0,3,24	0/0:10,0:9:3.05:0,3,17	0/0:5,0:5:2.60:0,3,10	1/1:9,0:8:2.56:18,3,0	1/1:2,3:4:5.89:59,6,0	1/1:1,4:5:2:118,2,0	./.	1/1:1,1:1:3.01:45,3,0
chr10	62439989	.	TC	T	762.57	PASS	AB=0.660;AC=27;AF=0.587;AN=46;BaseQRankSum=3.826;DP=113;FS=1.205;HRun=3;HaplotypeScore=83.8576;InbreedingCoeff=0.1166;MQ=43.22;MQ0=0;MQRankSum=-0.633;QD=13.38;ReadPosRankSum=2.138;VQSLOD=2.4968;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,3:3:2.81:28,3,0	./.	./.	0/0:5,0:2:2.22:0,2,7	1/1:0,6:6:2.36:8,2,0	1/1:0,2:2:3.01:33,3,0	1/1:3,1:3:6.02:73,6,0	./.	1/1:0,1:1:3.01:36,3,0	1/1:0,3:3:9.03:109,9,0	1/1:0,1:1:3.01:37,3,0	1/1:0,3:3:6.02:69,6,0	0/1:0,4:4:22.72:95,0,23	1/1:2,3:5:11.38:110,11,0	0/1:2,5:7:23.17:77,0,23	0/1:3,1:4:33.12:33,0,65	0/0:2,0:1:3.01:0,3,43	0/0:1,0:1:3.01:0,3,43	0/1:2,1:3:28.07:28,0,73	0/0:3,1:4:1.55:0,2,4	./.	0/0:11,0:11:9.31:0,9,170	0/0:9,0:9:6.91:0,7,86	0/0:7,0:6:0.22:0,0,0	1/1:2,4:4:3.01:36,3,0	0/1:2,2:4:29.60:87,0,30	./.	1/1:0,1:1:3.01:36,3,0
chr10	62444103	.	G	GC	18961.56	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-13.450;DP=659;FS=11.909;HRun=2;HaplotypeScore=63.7915;InbreedingCoeff=0.9991;MQ=84.62;MQ0=0;MQRankSum=-5.180;QD=39.26;ReadPosRankSum=5.566;VQSLOD=4.1966;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,26:28:72.24:1037,72,0	0/0:12,0:12:36.11:0,36,446	0/0:25,0:25:69.13:0,69,825	0/0:17,0:17:40.65:0,41,475	1/1:0,33:33:81.23:1139,81,0	1/1:3,32:35:84.28:1209,84,0	1/1:1,23:24:69.23:994,69,0	0/0:31,0:31:93.28:0,93,1142	0/0:21,0:21:60.19:0,60,744	1/1:0,31:31:93.31:1337,93,0	1/1:0,13:12:27.09:389,27,0	1/1:0,25:25:75.25:1080,75,0	1/1:0,25:26:75.25:1075,75,0	1/1:0,29:29:81.27:1167,81,0	1/1:0,32:32:90.30:1296,90,0	1/1:1,36:37:99:1512,105,0	0/0:20,0:20:54.17:0,54,668	1/1:1,22:23:63.21:899,63,0	1/1:1,16:17:48.16:691,48,0	1/1:1,31:32:81.27:1165,81,0	1/1:0,25:25:66.22:951,66,0	0/0:16,0:16:45.14:0,45,555	0/0:24,0:24:63.20:0,63,780	0/0:10,0:10:30.09:0,30,372	1/1:0,22:21:60.20:863,60,0	1/1:0,19:19:57.19:820,57,0	1/1:1,24:25:72.24:1037,72,0	1/1:0,7:7:21.07:302,21,0
chr10	62446046	.	T	TG	726.78	PASS	AB=0.813;AC=15;AF=0.268;AN=56;BaseQRankSum=0.008;DP=428;FS=3.305;HRun=10;HaplotypeScore=75.6721;InbreedingCoeff=0.6212;MQ=72.27;MQ0=0;MQRankSum=1.303;QD=5.42;ReadPosRankSum=-1.263;VQSLOD=1.2751;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:14,13:28:21.02:212,21,0	1/1:3,0:5:2.96:19,3,0	0/0:14,0:15:22.50:0,22,138	0/0:17,0:17:17.52:0,18,123	0/1:8,4:12:9.55:88,0,10	0/0:22,0:24:34.97:0,35,276	0/0:19,0:19:21.33:0,21,295	0/1:10,1:12:13.12:26,0,13	0/1:8,2:10:15.62:55,0,16	0/0:11,0:11:11.97:0,12,98	0/0:16,0:16:35.95:0,36,295	0/0:11,0:11:14.98:0,15,123	0/0:7,0:7:8.78:0,9,62	0/0:14,0:14:26:0,26,202	0/0:16,0:15:20.01:0,20,153	0/0:11,0:11:17.94:0,18,148	1/1:17,1:39:25.74:136,26,0	0/0:25,0:27:49.89:0,50,389	0/0:16,0:16:29.94:0,30,244	0/0:11,0:11:11.94:0,12,95	0/0:17,0:17:22.98:0,23,178	1/1:3,1:4:3.01:30,3,0	1/1:4,3:7:5.97:51,6,0	1/1:6,11:17:27.07:285,27,0	0/0:8,0:8:11.97:0,12,98	0/0:21,0:21:26.85:0,27,201	0/0:17,0:17:38.94:0,39,320	0/0:15,0:16:40.99:0,41,326
chr10	62446436	.	G	GTT	5278.17	PASS	AB=0.879;AC=52;AF=0.963;AN=54;BaseQRankSum=1.456;DP=182;FS=23.676;HRun=1;HaplotypeScore=87.4631;InbreedingCoeff=-0.0835;MQ=90.88;MQ0=0;MQRankSum=-3.381;QD=29.16;ReadPosRankSum=0.939;VQSLOD=3.1167;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,9:11:27.01:366,27,0	1/1:0,2:2:6.02:108,6,0	0/1:8,1:9:60.74:61,0,82	0/1:10,2:12:10.90:140,0,11	1/1:5,7:11:29.93:355,30,0	1/1:3,3:5:11.95:139,12,0	1/1:4,3:7:21.07:347,21,0	1/1:2,3:5:9:122,9,0	1/1:0,6:3:9.03:151,9,0	1/1:3,3:6:15.05:264,15,0	1/1:4,6:9:27.01:354,27,0	1/1:1,5:4:12.04:192,12,0	1/1:2,2:3:9.03:150,9,0	1/1:1,4:1:3.01:46,3,0	1/1:1,5:4:12.04:176,12,0	1/1:1,6:4:6.02:89,6,0	1/1:3,2:4:6.02:95,6,0	1/1:3,4:6:18.02:265,18,0	1/1:4,3:5:15.05:259,15,0	1/1:1,4:5:15.01:213,15,0	1/1:1,1:2:2.97:20,3,0	1/1:0,2:2:6.02:88,6,0	1/1:3,8:11:27.06:383,27,0	1/1:1,4:4:6.02:88,6,0	1/1:1,5:6:18.02:258,18,0	1/1:3,9:9:27.05:428,27,0	./.	1/1:4,0:4:11.93:120,12,0
chr10	62446439	.	G	GCA	1796.27	PASS	AB=0.810;AC=46;AF=0.920;AN=50;BaseQRankSum=-0.290;DP=126;FS=44.653;HRun=0;HaplotypeScore=83.7578;InbreedingCoeff=-0.1472;MQ=99.51;MQ0=0;MQRankSum=-1.333;QD=14.60;ReadPosRankSum=3.468;VQSLOD=1.1256;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,6:7:14.87:117,15,0	1/1:1,1:2:5.97:46,6,0	0/1:8,0:8:37.17:106,0,37	0/1:10,0:10:1.80:133,0,2	1/1:0,7:6:17.77:118,18,0	1/1:0,3:2:6:51,6,0	1/1:0,3:3:8.98:73,9,0	1/1:1,3:4:8.05:72,8,0	0/1:1,6:4:4.04:70,0,4	1/1:0,3:3:9.03:105,9,0	1/1:0,6:6:17.74:114,18,0	1/1:0,5:3:8.97:71,9,0	1/1:0,2:1:2.98:22,3,0	1/1:1,4:2:2.75:22,3,0	0/1:4,3:6:21.19:33,0,21	1/1:2,3:3:2.99:24,3,0	1/1:1,2:3:5.98:47,6,0	1/1:1,3:3:5.97:56,6,0	1/1:0,3:3:8.96:97,9,0	1/1:0,4:4:11.93:92,12,0	./.	1/1:1,1:2:2.94:22,3,0	1/1:1,5:6:14.72:93,15,0	1/1:1,2:2:2.96:24,3,0	1/1:0,5:5:14.96:121,15,0	1/1:2,6:6:14.41:168,14,0	./.	./.
chr10	62446442	.	GGGTA	G	1947.32	PASS	AB=0.690;AC=44;AF=0.880;AN=50;BaseQRankSum=2.639;DP=111;FS=141.661;HRun=0;HaplotypeScore=90.1095;InbreedingCoeff=0.0525;MQ=99.59;MQ0=0;MQRankSum=-4.088;QD=19.28;ReadPosRankSum=5.139;VQSLOD=0.7233;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,6:5:15.03:148,15,0	1/1:0,1:1:3.01:33,3,0	0/1:7,0:7:16.35:16,0,38	0/0:9,0:9:19.18:0,19,78	1/1:0,7:6:18:160,18,0	1/1:0,3:2:6.02:64,6,0	1/1:0,3:3:9.02:92,9,0	1/1:0,3:3:9.02:109,9,0	0/1:1,6:4:21.56:89,0,22	1/1:0,3:3:9.03:123,9,0	1/1:0,6:6:17.99:156,18,0	1/1:0,5:3:9.02:90,9,0	1/1:0,2:1:3:29,3,0	0/1:1,4:2:22.87:23,0,28	0/1:3,3:5:45.96:46,0,57	1/1:1,3:2:3.01:31,3,0	1/1:0,2:2:6.01:60,6,0	1/1:0,3:2:6.02:73,6,0	1/1:0,3:3:9.03:124,9,0	1/1:0,4:4:12.02:118,12,0	./.	1/1:0,1:1:3:29,3,0	1/1:1,5:6:14.99:128,15,0	1/1:0,2:1:3.01:31,3,0	1/1:0,5:5:15.03:154,15,0	1/1:1,6:5:12.04:150,12,0	./.	./.
chr10	62446464	.	G	GA	1413.29	PASS	AB=0.675;AC=38;AF=0.905;AN=42;BaseQRankSum=-3.305;DP=98;FS=53.261;HRun=2;HaplotypeScore=84.1519;InbreedingCoeff=0.0353;MQ=26.54;MQ0=0;MQRankSum=-1.187;QD=16.06;ReadPosRankSum=-0.968;VQSLOD=0.2311;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,5:5:6.02:70,6,0	./.	./.	./.	1/1:2,6:7:2.18:7,2,0	1/1:0,3:2:6.02:70,6,0	1/1:0,3:3:6.02:70,6,0	1/1:1,7:8:21.05:264,21,0	0/1:3,4:4:22.84:90,0,23	1/1:0,3:3:9.03:125,9,0	1/1:0,6:6:6.01:63,6,0	1/1:2,2:3:6.02:70,6,0	1/1:1,1:1:3.01:35,3,0	0/0:2,3:2:3.01:0,3,35	0/1:3,2:4:25.86:26,0,61	1/1:0,3:1:3.01:35,3,0	1/1:0,2:2:6.02:69,6,0	1/1:1,2:2:3:28,3,0	1/1:1,2:3:8.24:91,8,0	1/1:0,4:4:3.01:36,3,0	1/1:0,1:1:2.37:8,2,0	./.	1/1:2,3:5:3.01:33,3,0	./.	1/1:0,5:5:15.04:175,15,0	1/1:0,6:4:12.03:152,12,0	./.	./.
chr10	62446680	.	A	AT	4998.29	PASS	AB=1.000;AC=45;AF=0.804;AN=56;BaseQRankSum=-1.765;DP=410;FS=0.000;HRun=9;HaplotypeScore=93.3768;InbreedingCoeff=0.3995;MQ=73.41;MQ0=13;MQRankSum=-3.980;QD=13.51;ReadPosRankSum=-0.642;VQSLOD=4.6360;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:22,2:24:32.67:299,33,0	1/1:2,0:2:5.97:52,6,0	0/1:44,0:19:33.97:34,0,72	0/1:37,0:11:0.25:0,0,49	1/1:15,0:15:26.98:270,27,0	1/1:11,0:11:0.77:198,1,0	1/1:9,0:9:24.02:228,24,0	1/1:25,0:24:50.33:507,50,0	1/1:11,1:12:15.02:145,15,0	1/1:10,0:10:15.53:172,16,0	1/1:9,1:10:27.03:263,27,0	1/1:12,0:12:17.24:152,17,0	1/1:10,0:10:5.90:43,6,0	0/1:9,0:9:17.06:47,0,17	1/1:9,0:9:15:138,15,0	1/1:12,0:12:7.58:243,8,0	1/1:21,1:21:42.01:411,42,0	1/1:10,1:11:21.01:210,21,0	0/1:11,0:10:14.02:86,0,14	1/1:12,1:13:25.60:244,26,0	1/1:8,1:8:18.04:188,18,0	0/0:9,0:9:20.95:0,21,176	0/0:11,0:11:17.98:0,18,155	0/0:20,0:19:29.37:0,29,234	1/1:10,0:10:1.52:171,2,0	1/1:21,0:21:50.26:465,50,0	1/1:10,2:12:26.78:249,27,0	0/1:10,0:10:9.83:184,0,10
chr10	62446688	.	TTG	T	3948.29	PASS	AB=0.977;AC=42;AF=0.750;AN=56;BaseQRankSum=2.245;DP=424;FS=1.272;HRun=0;HaplotypeScore=94.7857;InbreedingCoeff=0.5933;MQ=60.47;MQ0=19;MQRankSum=-3.280;QD=13.07;ReadPosRankSum=-1.102;VQSLOD=3.3576;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:27,1:28:34.38:251,34,0	1/1:2,0:2:5.96:45,6,0	0/0:41,0:11:0.03:0,0,104	0/0:40,0:7:10.26:0,10,51	1/1:14,1:15:35.78:222,36,0	1/1:12,0:11:21.87:131,22,0	1/1:13,0:13:23.92:175,24,0	1/1:19,0:18:32.52:311,33,0	1/1:9,0:9:12.43:104,12,0	1/1:7,2:9:23.78:177,24,0	1/1:10,0:10:26.19:205,26,0	1/1:10,1:12:19.11:161,19,0	0/1:7,0:7:1.79:38,0,2	0/1:9,1:10:3.54:46,0,4	1/1:9,1:10:23.24:175,23,0	1/1:13,1:14:36.06:219,36,0	1/1:24,1:24:46.38:329,46,0	1/1:12,0:12:30.86:190,31,0	0/1:14,0:13:3.62:104,0,4	1/1:10,0:10:18.56:171,19,0	0/1:13,0:11:1.38:68,0,1	0/0:10,0:9:24.93:0,25,287	0/0:10,0:10:11.98:0,12,270	0/0:21,0:20:36.42:0,36,387	1/1:10,0:10:0.71:133,1,0	1/1:20,1:20:43.90:324,44,0	1/1:13,1:14:29.62:230,30,0	1/1:13,0:12:20.49:139,20,0
chr10	62446689	.	TG	T	4648.21	PASS	AB=0.563;AC=45;AF=0.804;AN=56;BaseQRankSum=1.104;DP=430;FS=12.866;HRun=1;HaplotypeScore=86.6187;InbreedingCoeff=0.6830;MQ=60.14;MQ0=20;MQRankSum=-3.588;QD=15.24;ReadPosRankSum=-1.804;VQSLOD=3.1570;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:21,7:28:36.89:330,37,0	1/1:0,2:2:6.02:70,6,0	0/0:41,2:11:4.44:0,4,87	0/0:38,3:7:3.84:0,4,30	1/1:8,7:15:36.36:258,36,0	1/1:10,2:11:13.75:150,14,0	1/1:8,5:13:23.94:211,24,0	1/1:2,17:18:32.61:367,33,0	1/1:8,2:10:14.48:126,14,0	1/1:8,1:9:23.89:158,24,0	1/1:5,5:10:26.16:223,26,0	1/1:3,9:12:20.28:182,20,0	1/1:1,6:7:7.38:48,7,0	0/1:2,7:9:12.02:32,0,12	1/1:7,3:10:23.36:193,23,0	1/1:12,2:14:35.32:208,35,0	1/1:19,6:24:46.82:413,47,0	1/1:11,2:13:33.82:223,34,0	1/1:14,0:13:1.31:127,1,0	1/1:8,4:12:27.32:217,27,0	1/1:12,1:11:12.62:80,13,0	0/0:10,0:9:24.75:0,25,224	0/0:10,0:10:22.67:0,23,223	0/0:21,0:20:14.55:0,15,237	1/1:7,3:10:0.80:175,1,0	1/1:17,4:20:53.68:396,54,0	1/1:10,4:14:34.21:273,34,0	1/1:9,4:12:18.79:188,19,0
chr10	62446690	.	GTT	G	2818.51	PASS	AB=0.977;AC=44;AF=0.786;AN=56;BaseQRankSum=2.237;DP=437;FS=5.635;HRun=15;HaplotypeScore=98.9732;InbreedingCoeff=0.4543;MQ=59.67;MQ0=22;MQRankSum=-2.932;QD=7.96;ReadPosRankSum=-0.599;VQSLOD=1.4308;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:28:21.89:290,22,0	1/1:2,0:2:5.79:38,6,0	0/1:44,0:12:3.67:4,0,141	0/0:42,0:7:6.82:0,7,44	1/1:15,0:15:24.63:168,25,0	1/1:9,1:9:8.53:75,9,0	1/1:14,0:14:17.57:126,18,0	1/1:21,0:20:6.30:129,6,0	1/1:10,0:10:8.62:51,9,0	1/1:9,1:10:18.32:140,18,0	1/1:11,0:11:20.68:144,21,0	1/1:12,0:12:17.11:120,17,0	0/1:7,0:7:10.34:10,0,27	1/1:9,0:9:5.67:32,6,0	1/1:9,0:10:20.09:134,20,0	1/1:10,2:14:20.75:156,21,0	1/1:25,0:24:35.25:244,35,0	1/1:10,3:13:21.35:161,21,0	1/1:14,1:13:15.15:189,15,0	1/1:11,0:12:8.06:105,8,0	0/1:13,0:11:13.72:57,0,14	0/0:10,0:9:18.06:0,18,242	0/0:9,1:10:0.74:0,1,289	0/0:20,0:20:41.96:0,42,506	1/1:9,0:9:20.56:157,21,0	1/1:22,0:21:10.87:172,11,0	1/1:12,2:14:25.91:183,26,0	0/1:12,1:12:25.30:96,0,25
chr10	62446704	.	TTG	T	2275.28	PASS	AB=1.000;AC=44;AF=0.786;AN=56;BaseQRankSum=5.029;DP=440;FS=3.015;HRun=0;HaplotypeScore=89.3778;InbreedingCoeff=0.6123;MQ=53.60;MQ0=27;MQRankSum=-4.161;QD=7.74;ReadPosRankSum=3.035;VQSLOD=3.4233;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:27:35.43:175,35,0	1/1:5,0:5:11.31:53,11,0	0/0:46,0:8:1.45:0,1,99	0/0:56,0:8:5.49:0,5,21	1/1:14,1:15:30.85:213,31,0	1/1:9,0:8:13.94:72,14,0	1/1:14,0:14:12.02:80,12,0	1/1:16,0:14:6.23:27,6,0	1/1:11,1:12:5.33:80,5,0	1/1:8,0:7:16.76:68,17,0	1/1:10,0:9:17.38:146,17,0	1/1:11,1:10:9.33:77,9,0	0/1:6,0:6:5.96:35,0,6	1/1:5,0:5:5.78:31,6,0	1/1:12,0:12:18.02:107,18,0	1/1:11,0:10:19.18:126,19,0	1/1:24,0:23:33.56:196,34,0	1/1:12,0:12:22.79:106,23,0	1/1:12,1:11:21.91:119,22,0	1/1:16,0:16:6.33:150,6,0	0/1:13,0:10:6.93:60,0,7	0/0:7,0:6:18.04:0,18,271	0/0:15,0:15:33.79:0,34,463	0/0:21,0:20:53.12:0,53,679	1/1:10,0:10:17.86:102,18,0	1/1:18,0:17:33.81:183,34,0	1/1:13,1:13:22.26:148,22,0	1/1:12,0:11:4.08:86,4,0
chr10	62450624	.	G	GTTC	14339.93	PASS	AB=0.982;AC=54;AF=0.964;AN=56;BaseQRankSum=4.667;DP=389;FS=1.387;HRun=0;HaplotypeScore=211.4673;InbreedingCoeff=-0.0484;MQ=97.18;MQ0=0;MQRankSum=-9.651;QD=36.86;ReadPosRankSum=4.048;VQSLOD=5.5795;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,12:16:45.07:710,45,0	1/1:2,2:5:15.05:259,15,0	0/1:26,1:27:81.36:81,0,641	0/1:25,0:25:75.43:75,0,612	1/1:4,10:15:31.14:512,31,0	1/1:3,8:12:30.10:518,30,0	1/1:6,8:14:36.06:560,36,0	1/1:11,8:20:42.14:789,42,0	1/1:6,15:21:51.05:745,51,0	1/1:1,11:13:36.12:650,36,0	1/1:6,4:10:30.06:494,30,0	1/1:1,11:12:36.12:571,36,0	1/1:1,13:14:40.69:622,41,0	1/1:5,16:21:61.72:965,62,0	1/1:5,16:21:55.67:832,56,0	1/1:5,14:21:57.15:911,57,0	1/1:0,5:5:15.05:260,15,0	1/1:2,2:5:9.03:165,9,0	1/1:6,3:9:24.08:407,24,0	1/1:3,14:17:48.52:734,49,0	1/1:7,6:13:26.94:439,27,0	1/1:4,10:14:33.39:477,33,0	1/1:2,10:13:35.56:534,36,0	1/1:1,2:5:6.02:116,6,0	1/1:1,8:9:25.64:413,26,0	1/1:7,9:16:45.15:799,45,0	1/1:4,9:13:36.12:595,36,0	1/1:0,2:2:6.02:106,6,0
chr10	62450629	.	TGGGGG	T	10028.42	PASS	AB=0.703;AC=54;AF=0.964;AN=56;BaseQRankSum=4.719;DP=280;FS=9.690;HRun=5;HaplotypeScore=177.7287;InbreedingCoeff=0.2438;MQ=99.72;MQ0=0;MQRankSum=-6.292;QD=35.82;ReadPosRankSum=5.166;VQSLOD=0.9637;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,12:12:36.12:528,36,0	1/1:1,2:3:6.02:96,6,0	0/1:14,0:21:7.27:7,0,209	0/1:9,0:19:1.92:2,0,68	1/1:0,11:11:30.03:361,30,0	1/1:1,8:9:26.58:376,27,0	1/1:0,8:8:24.08:363,24,0	1/1:0,9:9:15.05:266,15,0	1/1:0,15:16:42.10:609,42,0	1/1:0,12:12:33.11:584,33,0	1/1:0,4:5:15.05:212,15,0	1/1:0,11:11:33.11:500,33,0	1/1:1,13:14:42.14:622,42,0	1/1:0,16:16:48.16:711,48,0	1/1:1,16:17:48.13:695,48,0	1/1:1,14:15:39.13:600,39,0	1/1:0,5:5:15.01:203,15,0	1/1:0,2:2:6.02:100,6,0	1/1:0,3:3:9.03:158,9,0	1/1:0,14:14:42.14:624,42,0	1/1:0,6:6:15.01:201,15,0	1/1:0,10:10:30.04:406,30,0	1/1:0,11:11:29.96:383,30,0	1/1:0,2:2:3.01:44,3,0	1/1:0,8:8:24.08:358,24,0	1/1:0,9:9:27.09:447,27,0	1/1:0,10:10:30.10:469,30,0	1/1:0,2:2:6.02:102,6,0
chr10	62450633	.	GGT	G	1507.29	PASS	AB=0.950;AC=49;AF=0.875;AN=56;BaseQRankSum=-1.449;DP=271;FS=35.486;HRun=0;HaplotypeScore=190.6641;InbreedingCoeff=-0.0019;MQ=92.69;MQ0=0;MQRankSum=-2.884;QD=5.56;ReadPosRankSum=7.246;VQSLOD=1.4868;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,0:12:1.95:47,2,0	1/1:2,0:2:2.80:7,3,0	0/1:13,4:17:41.75:245,0,42	0/1:13,3:16:9.74:456,0,10	0/1:11,0:11:14.02:14,0,31	1/1:8,0:8:16.60:53,17,0	1/1:8,0:8:16.40:52,16,0	0/1:10,0:10:1.35:1,0,21	1/1:16,0:16:16.96:79,17,0	1/1:12,0:12:3.64:10,4,0	1/1:5,0:5:9.53:34,10,0	1/1:11,0:11:19.42:58,19,0	1/1:14,0:14:15.33:95,15,0	1/1:16,0:16:20.37:98,20,0	1/1:16,0:16:6.76:66,7,0	1/1:14,0:14:26.10:81,26,0	1/1:5,0:5:8.36:27,8,0	1/1:2,0:2:3.85:11,4,0	1/1:3,0:3:2.66:7,3,0	0/1:14,0:14:7.75:27,0,8	1/1:6,0:6:9.33:32,9,0	0/1:10,0:10:13.31:13,0,28	1/1:11,0:11:0.86:28,1,0	1/1:2,0:2:2.04:6,2,0	0/1:8,0:8:2.35:15,0,2	1/1:9,0:9:10.62:27,11,0	1/1:11,0:11:13.41:36,13,0	1/1:2,0:2:1.25:3,1,0
chr10	62451699	.	GA	G	244	PASS	AB=0.867;AC=13;AF=0.232;AN=56;BaseQRankSum=2.841;DP=555;FS=7.457;HRun=16;HaplotypeScore=94.0113;InbreedingCoeff=0.1117;MQ=56.72;MQ0=10;MQRankSum=2.344;QD=1.23;ReadPosRankSum=4.482;VQSLOD=-0.7345;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:28:44.19:0,44,229	1/1:7,1:10:9.75:46,10,0	0/0:9,0:4:8.50:0,9,49	0/0:9,0:7:8.78:0,9,59	0/0:22,0:19:21.41:0,21,105	0/0:22,2:27:4.30:0,4,268	0/0:29,0:28:50.83:0,51,409	1/1:10,8:20:24.46:137,24,0	0/0:21,0:24:25.95:0,26,230	0/0:24,1:25:14.05:0,14,239	0/1:12,1:12:6.17:6,0,45	0/0:8,0:13:13.18:0,13,95	0/0:20,0:21:21.78:0,22,171	0/0:18,0:17:26.70:0,27,192	0/0:22,0:22:35.83:0,36,278	0/0:18,1:20:11.13:0,11,216	0/1:14,10:24:5.92:133,0,6	0/1:13,2:16:1.07:1,0,158	0/0:17,1:19:4.72:0,5,212	0/1:19,1:19:0.98:1,0,107	0/0:18,1:19:4.30:0,4,133	0/1:12,3:15:15.07:15,0,98	0/0:18,0:18:3.53:0,4,125	0/0:23,2:26:23.07:0,23,311	0/1:15,3:18:21.16:21,0,156	0/1:15,3:19:15.38:15,0,183	0/1:20,1:25:8.70:9,0,231	0/1:11,1:12:5.55:6,0,65
chr10	62452324	.	C	CAAA	3616.29	PASS	AB=0.922;AC=37;AF=0.661;AN=56;BaseQRankSum=2.593;DP=403;FS=4.169;HRun=14;HaplotypeScore=82.6827;InbreedingCoeff=0.5077;MQ=62.54;MQ0=4;MQRankSum=-2.858;QD=12.43;ReadPosRankSum=-5.705;VQSLOD=0.0632;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:13:29.66:0,30,268	0/0:3,0:6:4.40:0,4,44	0/1:16,0:11:15.62:16,0,60	0/0:29,0:19:5.66:0,6,71	0/0:19,0:19:35.64:0,36,369	1/1:1,8:13:15.03:222,15,0	0/1:6,1:10:21.29:86,0,21	0/0:33,0:37:26.82:0,27,469	0/0:5,0:5:8.98:0,9,92	1/1:5,4:12:21.90:248,22,0	1/1:4,13:20:41.96:492,42,0	1/1:11,1:11:20.99:224,21,0	1/1:1,11:14:15.01:202,15,0	1/1:2,4:6:8.96:94,9,0	1/1:3,7:10:11.94:126,12,0	1/1:2,7:11:17.85:242,18,0	0/1:28,0:27:3.37:3,0,290	1/1:4,8:13:3.01:53,3,0	1/1:11,1:16:31.40:273,31,0	1/1:6,5:11:12:165,12,0	1/1:5,0:12:1.25:3,1,0	0/0:2,0:3:5.92:0,6,48	0/1:10,0:12:8:8,0,140	0/1:19,0:20:32.90:33,0,102	1/1:6,1:8:18.02:245,18,0	1/1:6,2:18:35.91:339,36,0	1/1:17,0:15:32.97:364,33,0	1/1:5,2:7:13.59:178,14,0
chr10	62452447	.	CAAAAAAAA	C	8289.06	PASS	AB=0.759;AC=32;AF=0.571;AN=56;BaseQRankSum=1.402;DP=453;FS=2.320;HRun=18;HaplotypeScore=101.5332;InbreedingCoeff=0.7634;MQ=46.18;MQ0=29;MQRankSum=-4.183;QD=32.76;ReadPosRankSum=7.180;VQSLOD=1.8637;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:12:23.95:0,24,555	0/0:0,0:3:9.03:0,9,255	0/0:26,0:3:8.88:0,9,89	0/0:28,0:9:21.26:0,21,294	0/0:7,0:11:24.08:0,24,655	1/1:3,9:12:20.91:429,21,0	1/1:3,14:16:27:555,27,0	0/0:17,0:30:62.38:0,62,1375	0/0:8,0:18:21.07:0,21,585	1/1:3,17:19:51.10:1071,51,0	1/1:4,13:14:23.77:473,24,0	1/1:3,11:14:24.06:513,24,0	1/1:6,10:16:20.75:415,21,0	1/1:3,7:10:14.88:327,15,0	1/1:1,20:22:41.86:869,42,0	1/1:2,13:15:24:522,24,0	0/0:14,0:32:42.61:0,43,1109	0/1:7,10:14:40.76:247,0,41	0/1:7,1:7:62.74:63,0,89	1/1:5,9:13:17.93:377,18,0	1/1:4,4:7:2.81:65,3,0	0/0:6,0:5:6.02:0,6,163	0/0:7,0:5:15.05:0,15,467	0/0:14,0:12:24.08:0,24,609	1/1:3,7:8:17.98:387,18,0	1/1:4,19:21:47.94:981,48,0	1/1:6,18:23:44.96:932,45,0	1/1:1,2:2:3.01:65,3,0
chr10	62452491	.	TGATGAAAATCAGAA	T	1236.99	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=2.566;DP=432;FS=6.374;HRun=0;HaplotypeScore=181.2317;InbreedingCoeff=0.9167;MQ=59.38;MQ0=0;MQRankSum=-3.847;QD=82.47;ReadPosRankSum=-0.244;VQSLOD=2.6142;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:17:48.16:0,48,3277	0/0:4,0:4:12.04:0,12,855	0/0:21,0:14:36.12:0,36,2214	0/0:12,0:7:15.05:0,15,704	0/0:18,0:18:54.19:0,54,3483	0/0:19,0:19:48.16:0,48,3226	0/0:19,0:18:48.16:0,48,3200	0/0:32,0:32:90.30:0,90,5580	0/0:15,0:15:33.11:0,33,2247	0/0:29,0:29:84.29:0,84,5601	0/0:16,0:15:42.10:0,42,2785	0/0:11,0:11:24.08:0,24,1571	0/0:13,0:13:33.11:0,33,2222	0/0:12,0:12:33.11:0,33,2202	0/0:17,0:17:48.16:0,48,3133	0/0:21,0:21:57.20:0,57,3667	0/0:31,0:31:66.20:0,66,4200	0/0:13,0:13:24.08:0,24,1590	0/0:14,0:14:36.11:0,36,2163	0/0:6,0:6:18.06:0,18,1142	0/0:11,0:11:27.09:0,27,1803	1/1:0,6:6:15.05:587,15,0	1/1:1,5:6:12.04:519,12,0	1/1:0,3:3:6.02:259,6,0	0/0:5,0:5:15.05:0,15,1035	0/0:24,0:24:66.23:0,66,4302	0/0:26,0:25:72.25:0,72,4779	0/0:10,0:10:30.10:0,30,2139
chr10	62452725	.	T	TATACATAC	403.20	PASS	AB=0.800;AC=11;AF=0.229;AN=48;BaseQRankSum=3.615;DP=468;FS=1.496;HRun=0;HaplotypeScore=132.6423;InbreedingCoeff=0.6744;MQ=59.00;MQ0=2;MQRankSum=-1.708;QD=4.11;ReadPosRankSum=-2.809;VQSLOD=2.0675;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:17,7:24:3.01:70,3,0	./.	./.	0/0:17,0:9:3.01:0,3,72	1/1:6,2:8:2.99:24,3,0	0/0:17,0:19:8.43:0,8,664	0/0:14,0:14:18.06:0,18,424	1/1:27,0:24:15.04:294,15,0	1/1:11,4:15:3.01:123,3,0	0/0:15,0:15:39.12:0,39,881	0/0:15,0:15:8.22:0,8,176	0/0:15,0:15:30.10:0,30,747	0/0:21,0:21:30.08:0,30,700	0/0:10,0:10:21.05:0,21,461	0/0:23,0:23:48.08:0,48,1175	0/0:22,0:22:51.16:0,51,1196	0/1:9,0:12:0:0,0,0	0/0:17,0:17:15.16:0,15,856	0/0:16,0:15:12.04:0,12,298	0/0:12,0:11:4.27:0,4,149	0/0:36,0:37:65.64:0,66,1615	./.	./.	1/1:12,0:12:3.22:24,3,0	0/0:13,0:13:15.05:0,15,376	0/0:26,0:26:38.92:0,39,1067	0/0:25,0:25:42.14:0,42,1030	0/0:19,0:19:51.18:0,51,1254
chr10	62452775	.	A	ATG	241.37	PASS	AC=4;AF=0.083;AN=48;BaseQRankSum=0.039;DP=370;FS=4.546;HRun=0;HaplotypeScore=62.8810;InbreedingCoeff=0.6283;MQ=52.99;MQ0=3;MQRankSum=0.744;QD=8.94;ReadPosRankSum=2.950;VQSLOD=3.0037;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,7:14:5.61:99,6,0	./.	0/0:17,0:7:3.01:0,3,30	0/0:12,0:6:3:0,3,29	1/1:3,10:13:15.02:247,15,0	0/0:15,0:15:27.07:0,27,324	0/0:10,0:10:20.98:0,21,229	0/0:24,0:22:45.08:0,45,485	0/0:7,0:7:6.02:0,6,75	0/0:16,0:16:41.79:0,42,403	0/0:17,0:15:9.03:0,9,112	0/0:12,0:12:24.05:0,24,274	0/0:12,0:12:17.97:0,18,191	0/0:10,0:10:21.03:0,21,223	0/0:20,0:20:24.06:0,24,286	0/0:20,0:20:48.06:0,48,542	./.	0/0:16,0:16:35.98:0,36,384	0/0:12,0:11:21.05:0,21,238	0/0:11,0:11:9.02:0,9,100	0/0:20,0:20:45.05:0,45,492	0/0:5,0:5:3.01:0,3,38	./.	./.	0/0:11,0:11:18:0,18,206	0/0:20,0:20:51.10:0,51,594	0/0:20,0:20:42.06:0,42,479	0/0:19,0:19:24.05:0,24,285
chr10	62452841	.	ACACACACACCCC	A	1713.30	PASS	AB=0.733;AC=23;AF=0.719;AN=32;BaseQRankSum=-0.732;DP=215;FS=5.204;HRun=0;HaplotypeScore=29.0184;InbreedingCoeff=0.1999;MQ=27.42;MQ0=52;MQRankSum=-0.457;QD=17.85;ReadPosRankSum=0.046;VQSLOD=0.7291;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:29,0:3:3.01:0,3,56	0/0:30,0:2:3.01:0,3,145	./.	./.	./.	1/1:2,0:1:3.01:40,3,0	./.	1/1:6,0:2:3.01:41,3,0	0/1:6,7:9:0:0,0,0	1/1:0,3:3:3.01:38,3,0	1/1:4,1:4:6.02:73,6,0	./.	./.	1/1:0,3:3:3.01:107,3,0	1/1:4,4:7:6.02:120,6,0	1/1:5,3:7:12.04:304,12,0	1/1:13,4:7:12.04:232,12,0	./.	./.	1/1:6,0:2:3.01:49,3,0	0/0:7,0:4:3.01:0,3,100	./.	./.	0/1:2,9:11:23.27:387,0,23	1/1:2,6:6:6.96:216,7,0	0/1:6,0:5:9:214,0,9
chr10	62454189	.	AT	A	1599.27	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=8.105;DP=409;FS=13.284;HRun=10;HaplotypeScore=40.2152;InbreedingCoeff=0.8751;MQ=62.54;MQ0=12;MQRankSum=-2.486;QD=16.83;ReadPosRankSum=0.730;VQSLOD=2.5396;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,18:22:53.98:468,54,0	1/1:2,5:7:8.98:78,9,0	0/0:14,0:6:5.06:0,5,47	0/0:15,0:6:6.07:0,6,46	1/1:2,11:12:32.99:286,33,0	0/0:12,0:12:36.10:0,36,398	0/0:15,0:14:36.06:0,36,376	1/1:6,23:26:56.98:495,57,0	0/0:6,0:6:15.04:0,15,166	0/0:12,0:12:18.05:0,18,199	0/0:14,0:14:36.10:0,36,398	0/0:14,0:13:27.07:0,27,297	0/0:11,0:11:30.08:0,30,332	0/0:12,0:11:29.29:0,29,305	0/0:13,1:15:13.30:0,13,353	0/0:8,0:8:18.03:0,18,190	1/1:2,21:23:50.99:443,51,0	0/0:30,0:29:63.17:0,63,696	0/0:23,0:23:53.97:0,54,570	0/0:13,0:13:33.09:0,33,364	0/0:3,0:3:6.02:0,6,66	0/0:2,0:2:6.02:0,6,66	0/0:11,0:10:18.05:0,18,199	0/0:14,0:14:27.05:0,27,286	0/0:13,0:13:36.10:0,36,398	0/0:23,0:23:57.14:0,57,617	0/0:21,1:21:54.72:0,55,626	0/0:11,0:11:18.05:0,18,199
chr10	62454310	.	GGT	G	4298.03	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-0.013;DP=301;FS=8.625;HRun=0;HaplotypeScore=50.8928;InbreedingCoeff=0.8964;MQ=68.14;MQ0=2;MQRankSum=0.098;QD=24.01;ReadPosRankSum=2.881;VQSLOD=4.8873;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:32.06:0,32,530	0/0:4,0:4:9.01:0,9,121	0/0:13,0:11:11.30:0,11,49	0/0:8,0:4:5.99:0,6,53	0/0:13,0:13:33.20:0,33,465	1/1:3,6:9:15.05:185,15,0	1/1:4,3:7:9.03:111,9,0	0/0:16,0:14:33.02:0,33,374	0/0:1,0:4:6:0,6,53	1/1:2,8:10:24.08:295,24,0	1/1:1,14:15:27.08:332,27,0	1/1:1,7:8:15.05:184,15,0	1/1:0,6:6:12.04:147,12,0	1/1:1,5:6:9.03:111,9,0	1/1:1,6:7:18.06:221,18,0	1/1:3,2:5:6.02:73,6,0	0/0:26,0:25:60.09:0,60,844	1/1:3,25:27:57.18:701,57,0	1/1:3,12:15:36.01:422,36,0	1/1:2,6:8:15.05:183,15,0	1/1:3,11:14:15.05:184,15,0	0/0:3,0:3:9.02:0,9,118	0/0:5,0:5:15.05:0,15,242	0/0:11,0:11:21.06:0,21,319	1/1:1,10:11:21.07:258,21,0	1/1:2,6:8:20.96:235,21,0	1/1:2,7:9:21.06:248,21,0	1/1:1,12:13:33.10:406,33,0
chr10	62460017	.	G	GA	117.35	PASS	AB=0.905;AC=8;AF=0.143;AN=56;BaseQRankSum=2.889;DP=399;FS=7.567;HRun=13;HaplotypeScore=94.6951;InbreedingCoeff=0.3955;MQ=40.91;MQ0=23;MQRankSum=-2.135;QD=1.47;ReadPosRankSum=-1.351;VQSLOD=-0.5647;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:12,0:13:2.75:64,0,3	0/0:5,0:5:2.93:0,3,21	0/1:21,0:8:0.42:0,0,37	0/0:14,0:3:5.72:0,6,30	1/1:13,0:15:17.19:80,17,0	0/0:13,0:11:9.94:0,10,144	0/1:9,1:8:12.92:13,0,67	0/0:16,0:14:23.93:0,24,169	1/1:3,2:5:9.01:83,9,0	0/0:16,0:15:24.26:0,24,163	0/0:16,1:16:1.84:0,2,151	0/0:6,0:6:14.86:0,15,102	0/0:17,0:17:32.48:0,32,190	0/0:15,0:14:22.81:0,23,148	0/0:15,0:16:16.89:0,17,109	0/0:17,0:16:32.69:0,33,224	0/0:22,1:20:14.65:0,15,230	0/0:17,0:12:16.88:0,17,109	0/0:16,1:16:12.89:0,13,224	0/0:10,0:9:14.83:0,15,102	0/0:12,0:13:13.74:0,14,88	0/0:12,0:12:18.25:0,18,123	0/0:9,0:9:17.75:0,18,119	0/0:12,0:11:11.74:0,12,82	0/0:17,1:18:10.60:0,11,209	0/0:21,0:19:34.65:0,35,232	0/0:9,0:9:14.82:0,15,103	0/1:10,1:11:7.07:7,0,102
chr10	62460079	.	GTCTTA	G	2315.40	PASS	AB=0.994;AC=46;AF=0.821;AN=56;BaseQRankSum=-5.423;DP=314;FS=0.000;HRun=0;HaplotypeScore=136.3409;InbreedingCoeff=-0.1272;MQ=34.39;MQ0=1;MQRankSum=0.003;QD=7.40;ReadPosRankSum=-2.707;VQSLOD=1.9902;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:9,0:9:10.20:94,10,0	1/1:4,0:4:11.83:104,12,0	1/1:1,0:1:2.74:12,3,0	0/0:1,0:1:2.94:0,3,18	1/1:28,0:27:2.74:15,3,0	0/1:9,0:8:16.54:85,0,17	1/1:3,10:12:2.68:11,3,0	1/1:2,2:4:2.70:89,3,0	1/1:5,0:5:3.01:36,3,0	1/1:22,1:21:49.69:402,50,0	1/1:21,0:21:1.24:32,1,0	1/1:5,0:5:8.14:52,8,0	0/1:11,0:11:21.99:59,0,22	0/1:11,0:10:17.64:53,0,18	0/1:11,0:11:19.27:58,0,19	0/1:11,0:11:37.89:111,0,38	0/1:13,0:12:3.98:136,0,4	1/1:6,0:6:10.18:97,10,0	1/1:4,0:4:5.78:31,6,0	1/1:17,0:17:3.21:11,3,0	1/1:7,1:8:0.47:1,0,0	1/1:19,0:19:20.09:198,20,0	1/1:15,0:14:5.19:65,5,0	1/1:8,0:8:5.32:68,5,0	1/1:25,0:24:43.18:366,43,0	0/1:18,1:17:88.72:141,0,89	0/1:7,0:7:40.88:43,0,41	1/1:6,0:5:8.97:79,9,0
chr10	62460404	.	CCCCT	C	2085.68	PASS	AB=0.823;AC=36;AF=0.720;AN=50;BaseQRankSum=-2.613;DP=375;FS=17.740;HRun=0;HaplotypeScore=44.0346;InbreedingCoeff=0.1137;MQ=52.84;MQ0=34;MQRankSum=-1.288;QD=8.21;ReadPosRankSum=4.199;VQSLOD=0.4341;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:12,0:10:1.83:27,2,0	./.	0/1:98,0:14:0.05:0,0,351	0/0:101,0:12:26.67:0,27,445	0/0:3,0:3:2.96:0,3,19	1/1:1,4:5:6.02:110,6,0	1/1:2,2:4:6.02:90,6,0	0/1:7,0:6:15.43:20,0,15	0/0:6,0:5:12:0,12,148	1/1:1,4:4:6.01:110,6,0	1/1:3,3:6:14.96:185,15,0	./.	0/1:5,4:7:67.67:148,0,68	1/1:2,3:4:6.02:85,6,0	1/1:4,3:3:6.02:110,6,0	1/1:4,5:4:6.02:93,6,0	0/1:16,0:14:9.75:10,0,28	./.	1/1:2,3:4:6.89:112,7,0	0/1:2,6:8:29.70:165,0,30	1/1:2,3:4:3.01:55,3,0	1/1:3,0:2:5.60:27,6,0	0/1:7,0:7:6.62:7,0,30	1/1:12,0:12:16.86:80,17,0	1/1:2,4:6:12.04:177,12,0	1/1:1,6:7:14.84:216,15,0	0/1:6,5:10:9.52:327,0,10	0/1:3,4:6:8.78:84,0,9
chr10	62460405	.	CCCT	C	1639.70	PASS	AB=0.917;AC=37;AF=0.712;AN=52;BaseQRankSum=-1.433;DP=376;FS=11.720;HRun=0;HaplotypeScore=43.4697;InbreedingCoeff=0.2432;MQ=52.74;MQ0=35;MQRankSum=-1.821;QD=10.44;ReadPosRankSum=3.229;VQSLOD=1.4605;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:12,0:10:21.33:122,21,0	./.	0/0:98,0:14:5.61:0,6,227	0/0:101,0:12:21.06:0,21,309	0/0:4,0:4:1.25:0,1,3	1/1:5,0:5:6.01:63,6,0	1/1:3,0:3:5.95:54,6,0	1/1:9,0:7:5.46:43,5,0	0/0:6,0:5:8.94:0,9,75	1/1:5,0:4:5.99:55,6,0	1/1:6,0:6:15:149,15,0	./.	0/1:9,0:7:53.82:66,0,54	1/1:5,0:4:5.99:49,6,0	1/1:7,0:3:6.01:63,6,0	1/1:9,0:4:5.97:48,6,0	0/1:16,0:14:8.65:21,0,9	0/0:8,0:6:0:0,0,0	1/1:5,0:4:6.47:56,6,0	0/1:7,0:8:16.53:87,0,17	1/1:5,0:4:3.01:35,3,0	1/1:1,2:2:6.02:96,6,0	0/1:2,5:7:9.31:41,0,9	1/1:0,11:11:18.06:287,18,0	1/1:6,0:6:11.66:87,12,0	1/1:8,0:7:14.99:136,15,0	1/1:11,0:10:7.86:185,8,0	0/1:7,0:6:8.70:46,0,9
chr10	62460406	.	CCT	C	1242.28	PASS	AB=1.000;AC=41;AF=0.788;AN=52;BaseQRankSum=-1.265;DP=376;FS=11.921;HRun=0;HaplotypeScore=43.3021;InbreedingCoeff=0.1913;MQ=52.76;MQ0=35;MQRankSum=-1.700;QD=7.48;ReadPosRankSum=3.937;VQSLOD=1.6147;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,7:10:24.02:302,24,0	./.	0/0:98,0:14:17.33:0,17,125	0/0:101,0:12:25.08:0,25,192	1/1:3,0:3:2.91:21,3,0	1/1:5,0:5:5.96:44,6,0	1/1:3,0:3:4.54:27,5,0	1/1:9,0:7:7.64:47,8,0	0/1:5,0:4:7.90:9,0,8	1/1:6,0:5:5.10:41,5,0	1/1:6,0:6:13.41:67,13,0	./.	0/1:9,0:7:39.34:48,0,39	1/1:5,0:4:2.62:21,3,0	1/1:7,0:3:5.96:44,6,0	1/1:9,0:4:5.57:31,6,0	0/1:16,0:14:9.29:14,0,9	0/0:9,0:7:0:0,0,0	1/1:5,0:4:6.42:44,6,0	0/1:8,0:8:4.70:66,0,5	1/1:5,0:4:2.98:22,3,0	1/1:3,0:2:5.97:44,6,0	1/1:7,0:7:4.94:33,5,0	1/1:11,0:11:17.89:131,18,0	1/1:6,0:6:8.64:50,9,0	1/1:8,0:7:13.98:83,14,0	1/1:11,0:10:23.48:163,23,0	0/1:6,0:6:8.72:32,0,9
chr10	62460927	.	G	GA	7578.30	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-12.169;DP=545;FS=14.333;HRun=7;HaplotypeScore=62.5560;InbreedingCoeff=0.9522;MQ=66.43;MQ0=4;MQRankSum=1.155;QD=24.29;ReadPosRankSum=1.560;VQSLOD=4.1210;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,108,1030	0/0:5,0:5:12.02:0,12,116	0/0:10,0:9:7.65:0,8,100	0/0:17,0:13:15.05:0,15,94	0/0:21,0:21:57.97:0,58,545	1/1:4,20:24:63.02:737,63,0	1/1:3,22:25:34.32:422,34,0	0/0:30,0:29:49.10:0,49,513	0/0:22,0:21:60.06:0,60,570	1/1:2,22:24:66.17:767,66,0	1/1:1,13:14:33.10:395,33,0	1/1:2,16:18:33.09:388,33,0	1/1:1,11:12:24.07:290,24,0	1/1:1,16:17:39.12:470,39,0	1/1:0,16:16:33.10:399,33,0	1/1:6,18:24:7.30:370,7,0	0/0:35,0:35:96.15:0,96,926	1/1:0,19:19:42.13:508,42,0	1/1:6,15:20:43.60:524,44,0	1/1:3,11:14:29.97:302,30,0	1/1:3,12:15:7.13:369,7,0	0/0:19,0:19:54.07:0,54,516	0/0:17,0:17:48.07:0,48,462	0/0:15,0:15:19.21:0,19,328	1/1:0,10:10:21.06:249,21,0	1/1:6,17:22:51.16:612,51,0	1/1:3,24:27:54.57:632,55,0	1/1:1,8:9:12.04:145,12,0
chr10	62460935	.	GA	G	1219.59	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-2.894;DP=554;FS=1.083;HRun=10;HaplotypeScore=87.1389;InbreedingCoeff=0.9688;MQ=70.84;MQ0=3;MQRankSum=0.839;QD=19.67;ReadPosRankSum=3.873;VQSLOD=4.3331;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,36:40:98.97:859,99,0	0/0:6,0:6:17.84:0,18,179	0/0:16,0:13:13.91:0,14,234	0/0:21,0:15:13.81:0,14,173	1/1:3,19:22:56.86:482,57,0	0/0:23,0:23:67.02:0,67,715	0/0:22,0:22:35.46:0,35,371	0/0:27,1:27:43.62:0,44,698	0/0:22,0:21:51.14:0,51,564	0/0:25,0:25:75.19:0,75,815	0/0:13,0:14:41.91:0,42,425	0/0:17,0:17:30.88:0,31,333	0/0:14,0:14:32.95:0,33,363	0/0:17,0:18:44.95:0,45,477	0/0:20,0:20:45.11:0,45,488	0/0:20,0:20:36.10:0,36,398	0/0:33,1:34:55.16:0,55,837	0/0:20,0:20:45.12:0,45,497	0/0:19,0:19:47.96:0,48,510	0/0:15,0:15:26.08:0,26,340	0/0:13,0:13:36.10:0,36,396	0/0:22,0:22:57.14:0,57,621	0/0:17,0:17:42.11:0,42,465	0/0:16,0:16:48.13:0,48,530	0/0:12,0:12:24.54:0,25,266	0/0:20,0:20:54.02:0,54,544	0/0:25,0:26:59.86:0,60,607	0/0:10,0:10:18.04:0,18,192
chr10	62464535	.	A	ACGCGCGCG	519.84	PASS	AB=1.000;AC=12;AF=0.273;AN=44;BaseQRankSum=-2.077;DP=239;FS=3.608;HRun=0;HaplotypeScore=78.0044;InbreedingCoeff=0.2466;MQ=64.85;MQ0=1;MQRankSum=-1.494;QD=5.71;ReadPosRankSum=-1.424;VQSLOD=1.1255;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:9.02:0,9,184	./.	0/0:10,0:8:24.07:0,24,508	0/0:6,0:5:15:0,15,348	0/0:7,0:7:6:0,6,70	./.	0/1:15,0:15:53.90:70,0,54	1/1:4,0:4:11.97:176,12,0	1/1:2,5:12:0.47:1,0,0	0/0:5,0:5:9.22:0,9,112	./.	0/0:15,0:14:15.99:0,16,199	0/0:10,0:10:6.63:0,7,60	0/1:7,0:7:16.59:17,0,151	./.	1/1:15,0:15:0.87:3,1,0	1/1:4,9:16:12.04:298,12,0	0/0:8,0:8:15.14:0,15,168	0/1:12,0:11:27.15:27,0,205	./.	0/0:13,0:13:14.94:0,15,211	0/0:9,0:9:9.03:0,9,154	0/0:4,0:4:6.02:0,6,152	0/0:15,0:15:2.13:0,2,19	0/0:7,0:7:3:0,3,29	0/0:8,0:9:14.21:0,14,162	0/1:10,0:10:52.52:58,0,53	./.
chr10	62464815	.	T	TACAC	3551.66	PASS	AB=0.873;AC=38;AF=0.679;AN=56;BaseQRankSum=1.009;DP=557;FS=5.951;HRun=0;HaplotypeScore=124.3464;InbreedingCoeff=0.3681;MQ=58.39;MQ0=7;MQRankSum=-1.369;QD=8.02;ReadPosRankSum=-2.495;VQSLOD=1.8208;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:27:15.03:22,0,15	1/1:7,6:13:3:71,3,0	0/0:16,0:4:9.03:0,9,148	0/0:17,0:10:17.33:0,17,255	1/1:11,0:11:11.49:226,11,0	1/1:6,6:20:5.95:95,6,0	0/1:19,11:33:27.01:36,0,27	0/1:24,0:24:0.56:40,0,1	0/0:17,0:17:45.14:0,45,743	1/1:18,0:18:5.80:102,6,0	1/1:13,1:15:3.96:26,4,0	0/1:15,9:27:24.38:193,0,24	1/1:7,12:22:5.96:94,6,0	1/1:6,8:19:0.78:67,1,0	1/1:6,10:18:12.01:281,12,0	1/1:9,13:25:8.43:211,8,0	0/1:18,1:22:27.34:227,0,27	1/1:6,7:15:16.93:339,17,0	1/1:9,0:10:13.36:141,13,0	1/1:13,0:12:10.62:138,11,0	1/1:50,0:51:51.35:586,51,0	0/0:21,0:19:27.41:0,27,323	0/0:12,0:12:18.05:0,18,264	0/0:31,0:31:50.91:0,51,582	1/1:15,0:15:4.84:46,5,0	0/1:18,0:18:16.39:244,0,16	1/1:6,9:21:14.15:229,14,0	1/1:4,2:6:9.01:138,9,0
chr10	62467309	.	TA	T	827.77	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.511;DP=622;FS=3.919;HRun=1;HaplotypeScore=62.3073;InbreedingCoeff=0.9975;MQ=95.43;MQ0=0;MQRankSum=-0.201;QD=34.49;ReadPosRankSum=0.949;VQSLOD=3.4776;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,105,1649	0/0:8,0:8:24.08:0,24,383	0/0:29,0:29:81.06:0,81,1187	0/0:30,0:30:68.53:0,69,1255	0/0:12,0:12:36.11:0,36,552	0/0:17,0:17:51.17:0,51,815	0/0:18,0:18:54.18:0,54,863	0/0:26,0:26:78.25:0,78,1203	1/1:0,24:24:66.22:923,66,0	0/0:22,0:22:66.23:0,66,1055	0/0:21,0:21:63.21:0,63,996	0/0:23,0:23:69.24:0,69,1100	0/0:25,0:25:72.23:0,72,1122	0/0:17,0:17:51.17:0,51,812	0/0:22,0:22:66.22:0,66,1050	0/0:28,0:28:84.29:0,84,1340	0/0:27,0:27:81.21:0,81,1241	0/0:18,0:18:54.18:0,54,858	0/0:23,0:23:69.24:0,69,1101	0/0:22,0:22:66.22:0,66,1045	0/0:36,0:36:99:0,108,1725	0/0:18,0:18:54.18:0,54,841	0/0:11,0:11:33.11:0,33,527	0/0:23,0:23:69.24:0,69,1102	0/0:19,0:19:57.19:0,57,911	0/0:27,0:27:78.24:0,78,1182	0/0:27,0:27:81.25:0,81,1241	0/0:12,0:12:36.12:0,36,575
chr10	62470647	.	T	TG	16664.55	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-9.092;DP=551;FS=1.299;HRun=3;HaplotypeScore=55.9747;InbreedingCoeff=0.9929;MQ=88.90;MQ0=0;MQRankSum=-5.790;QD=37.79;ReadPosRankSum=3.473;VQSLOD=5.2411;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,35:38:96.32:1344,96,0	1/1:0,9:9:24.08:335,24,0	0/0:16,0:16:42.12:0,42,501	0/0:26,0:26:67.08:0,67,769	1/1:5,14:19:39.13:546,39,0	1/1:0,17:17:48.16:672,48,0	1/1:2,23:25:69.23:966,69,0	1/1:0,24:24:72.24:1004,72,0	0/0:19,0:19:57.17:0,57,684	1/1:0,10:10:27.09:376,27,0	1/1:0,11:11:33.11:462,33,0	1/1:0,27:27:72.24:1008,72,0	1/1:1,13:14:33.11:461,33,0	1/1:1,22:23:57.19:798,57,0	1/1:1,26:27:78.26:1092,78,0	1/1:1,16:17:45.15:630,45,0	1/1:3,29:32:84.28:1176,84,0	1/1:0,27:27:75.25:1050,75,0	1/1:0,18:18:54.16:717,54,0	1/1:2,10:12:33.11:458,33,0	1/1:0,18:18:48.16:672,48,0	0/0:11,0:11:30.09:0,30,360	0/0:18,0:18:54.16:0,54,643	0/0:20,0:20:60.16:0,60,706	1/1:0,17:17:51.17:714,51,0	1/1:0,25:25:72.24:1008,72,0	1/1:0,26:27:72.24:1006,72,0	1/1:0,4:4:12.04:168,12,0
chr10	62470939	.	A	AG	1535.58	PASS	AC=30;AF=0.577;AN=52;BaseQRankSum=-5.806;DP=194;FS=22.440;HRun=7;HaplotypeScore=28.9244;InbreedingCoeff=0.7375;MQ=97.69;MQ0=0;MQRankSum=-2.672;QD=19.19;ReadPosRankSum=-0.243;VQSLOD=1.6593;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:54.06:0,54,514	0/0:1,0:1:3:0,3,29	0/0:9,0:9:15.77:0,16,121	0/0:18,0:18:26.64:0,27,264	0/0:3,0:3:9.01:0,9,87	1/1:0,1:1:3.01:36,3,0	1/1:3,2:5:3.01:36,3,0	0/0:13,0:13:20.99:0,21,203	0/0:6,0:6:12.02:0,12,116	1/1:2,5:7:15.03:170,15,0	1/1:3,0:3:3.01:36,3,0	1/1:1,10:11:24.07:290,24,0	1/1:2,3:5:3.01:36,3,0	1/1:2,5:7:8.65:108,9,0	./.	1/1:3,6:9:15.05:181,15,0	0/0:14,0:14:32.54:0,33,298	./.	1/1:3,1:4:6.02:71,6,0	1/1:1,2:3:3.01:36,3,0	1/1:1,13:14:33.10:399,33,0	0/0:11,0:11:21.03:0,21,202	0/0:4,0:4:12.02:0,12,116	0/0:13,0:13:17.95:0,18,174	1/1:0,4:4:12.04:145,12,0	1/1:0,3:3:9.03:109,9,0	1/1:3,0:3:5.59:36,6,0	1/1:0,1:1:3.01:36,3,0
chr10	62471280	.	C	CA	5508.23	PASS	AB=0.917;AC=49;AF=0.980;AN=50;BaseQRankSum=-3.224;DP=145;FS=0.000;HRun=0;HaplotypeScore=22.8580;InbreedingCoeff=-0.0986;MQ=70.66;MQ0=1;MQRankSum=-1.776;QD=37.99;ReadPosRankSum=2.317;VQSLOD=4.0662;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,10:10:30.10:479,30,0	./.	1/1:4,0:1:3.01:48,3,0	0/1:10,1:7:47.78:48,0,59	1/1:0,1:1:3.01:48,3,0	1/1:0,2:2:6.02:96,6,0	1/1:0,7:7:21.07:331,21,0	1/1:0,7:7:21.07:336,21,0	1/1:0,3:3:9.03:144,9,0	1/1:0,2:2:6.02:96,6,0	1/1:0,1:1:3.01:48,3,0	1/1:1,5:6:5.74:96,6,0	1/1:0,4:4:9.03:144,9,0	1/1:0,7:7:18.06:288,18,0	1/1:0,5:5:15.05:240,15,0	1/1:0,3:3:9.03:144,9,0	1/1:0,16:16:45.15:719,45,0	1/1:0,9:9:18.06:288,18,0	1/1:0,2:2:6.02:96,6,0	./.	1/1:0,20:20:45.14:719,45,0	1/1:0,2:2:6.02:96,6,0	1/1:0,2:2:6.02:96,6,0	1/1:0,16:16:45.15:718,45,0	1/1:0,2:2:3.01:48,3,0	1/1:0,2:2:6.02:96,6,0	1/1:0,1:1:3.01:48,3,0	./.
chr10	62474803	.	GC	G	107.61	PASS	AB=0.786;AC=6;AF=0.115;AN=52;BaseQRankSum=3.999;DP=216;FS=1.600;HRun=1;HaplotypeScore=37.1511;InbreedingCoeff=-0.1026;MQ=70.00;MQ0=0;MQRankSum=-3.165;QD=4.14;ReadPosRankSum=-0.906;VQSLOD=0.0892;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:33.11:0,33,508	./.	0/1:4,0:4:0.71:1,0,18	0/0:5,0:5:6.02:0,6,87	0/0:3,0:3:3.47:0,3,49	./.	0/0:30,1:31:72.71:0,73,1102	0/0:8,0:8:15.01:0,15,206	0/0:0,1:1:0.47:0,0,1	0/1:3,1:4:26.59:27,0,130	0/1:2,1:3:32.39:32,0,80	0/0:3,0:3:9.03:0,9,140	0/0:3,0:3:9.03:0,9,141	0/0:2,0:2:6.02:0,6,94	0/0:4,0:4:6.02:0,6,96	0/0:3,0:3:9.03:0,9,143	0/0:16,0:16:33.11:0,33,523	0/0:26,0:26:75.26:0,75,1194	0/0:6,0:6:18.06:0,18,274	0/1:2,1:3:25.65:26,0,80	0/0:30,0:30:66.22:0,66,1031	0/1:3,3:6:70.37:70,0,80	0/0:3,0:3:9.03:0,9,143	0/0:18,1:19:28.16:0,28,807	0/0:7,0:7:21.07:0,21,332	0/1:4,2:6:64.19:64,0,170	0/0:2,0:2:3.01:0,3,40	0/0:2,0:2:6.02:0,6,96
chr10	62474849	.	A	AG	1225.86	PASS	AC=28;AF=0.933;AN=30;BaseQRankSum=-1.564;DP=94;FS=11.357;HRun=1;HaplotypeScore=27.1490;InbreedingCoeff=0.1509;MQ=71.04;MQ0=0;MQRankSum=-1.733;QD=18.03;ReadPosRankSum=0.465;VQSLOD=2.2818;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,0:8:6:56,6,0	1/1:2,0:2:3.01:32,3,0	1/1:2,0:2:2.68:11,3,0	0/0:2,0:2:3.01:0,3,33	./.	./.	1/1:15,0:15:18.04:210,18,0	1/1:1,0:1:2.99:23,3,0	./.	1/1:1,0:1:3:27,3,0	./.	./.	1/1:2,0:2:3:25,3,0	1/1:3,0:3:6.01:69,6,0	./.	./.	./.	1/1:16,0:16:42.10:509,42,0	1/1:1,2:3:6:68,6,0	1/1:0,1:1:3.01:36,3,0	./.	1/1:2,0:2:3.01:38,3,0	./.	1/1:7,0:7:14.96:135,15,0	1/1:5,0:5:6.02:72,6,0	./.	./.	./.
chr10	62474850	.	GT	G	1022.29	PASS	AB=1.000;AC=27;AF=0.844;AN=32;BaseQRankSum=-2.330;DP=90;FS=21.357;HRun=1;HaplotypeScore=27.4337;InbreedingCoeff=0.1693;MQ=71.56;MQ0=0;MQRankSum=-2.330;QD=15.49;ReadPosRankSum=-0.635;VQSLOD=1.5095;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,7:7:6.02:81,6,0	1/1:0,2:2:2.72:34,3,0	0/1:1,0:2:0.30:23,0,0	0/0:1,1:2:2.94:0,3,18	./.	./.	1/1:0,15:15:17.97:216,18,0	1/1:1,0:1:3.01:40,3,0	./.	1/1:0,1:1:3.01:40,3,0	./.	./.	1/1:0,2:2:3.01:40,3,0	1/1:0,3:3:6.02:76,6,0	./.	./.	./.	1/1:10,6:16:41.67:373,42,0	1/1:1,1:2:2.92:17,3,0	1/1:1,0:1:2.92:17,3,0	0/0:0,12:12:0.47:0,0,1	1/1:0,2:2:3.01:39,3,0	./.	1/1:7,0:7:12:58,12,0	1/1:0,5:5:5.93:54,6,0	./.	./.	./.
chr10	62475470	.	CCCG	C	80	PASS	AB=0.823;AC=5;AF=0.100;AN=50;BaseQRankSum=4.123;DP=124;FS=0.000;HRun=0;HaplotypeScore=29.6303;InbreedingCoeff=-0.1992;MQ=87.40;MQ0=0;MQRankSum=-0.226;QD=2.50;ReadPosRankSum=-0.358;VQSLOD=0.6942;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:5:15.01:0,15,281	0/0:1,0:1:3.01:0,3,74	0/0:8,0:8:1.67:0,2,105	0/1:8,0:6:19.66:20,0,103	./.	0/1:2,2:4:64.82:84,0,65	0/0:10,1:11:30.10:0,30,670	0/1:8,1:9:20.63:21,0,353	0/0:1,0:1:3.01:0,3,56	0/1:2,1:3:39.37:39,0,137	0/0:1,0:1:3.01:0,3,68	0/0:4,0:4:12:0,12,240	0/0:4,0:4:12.04:0,12,283	0/0:3,1:4:9.03:0,9,218	0/0:3,0:3:6.02:0,6,120	0/0:2,0:2:6.02:0,6,147	0/0:8,0:8:24.08:0,24,549	0/0:4,0:4:12.04:0,12,295	0/1:6,2:8:26.52:27,0,332	./.	0/0:17,0:17:48.07:0,48,1053	0/0:4,0:4:6.91:0,7,145	0/0:2,0:2:3.01:0,3,66	0/0:7,0:7:21.07:0,21,471	0/0:1,1:2:3.90:0,4,75	0/0:2,0:2:6.02:0,6,111	0/0:2,0:1:6.02:0,6,147	./.
chr10	62476043	.	AG	A	4288.09	PASS	AC=36;AF=0.750;AN=48;BaseQRankSum=2.735;DP=244;FS=4.579;HRun=7;HaplotypeScore=30.9622;InbreedingCoeff=0.7521;MQ=69.81;MQ0=0;MQRankSum=-2.818;QD=21.23;ReadPosRankSum=1.115;VQSLOD=3.6771;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,9:10:21.05:214,21,0	1/1:0,1:1:3.01:30,3,0	0/0:4,0:4:11.96:0,12,116	0/0:5,0:5:15.05:0,15,186	1/1:3,1:4:3:31,3,0	./.	1/1:6,27:33:78.17:796,78,0	1/1:0,4:4:5.97:50,6,0	0/0:3,0:3:9.03:0,9,113	1/1:0,7:7:8.98:92,9,0	./.	1/1:2,4:6:9.02:92,9,0	1/1:0,6:6:15.02:153,15,0	1/1:0,6:6:18.04:183,18,0	1/1:0,7:7:18.03:184,18,0	./.	1/1:1,17:18:48.11:490,48,0	1/1:3,21:24:54.12:551,54,0	1/1:1,6:7:18.03:178,18,0	./.	1/1:8,38:45:90.17:909,90,0	0/0:3,0:3:9.02:0,9,101	0/0:2,0:2:3.01:0,3,38	0/0:21,0:21:63.20:0,63,793	1/1:5,4:9:9.01:92,9,0	1/1:4,3:7:6.01:61,6,0	1/1:1,3:4:9.02:92,9,0	1/1:0,3:3:9.02:92,9,0
chr10	62477126	.	CA	C	5076.57	PASS	AB=0.728;AC=34;AF=0.607;AN=56;BaseQRankSum=6.557;DP=489;FS=0.000;HRun=11;HaplotypeScore=54.9089;InbreedingCoeff=0.8029;MQ=76.23;MQ0=1;MQRankSum=0.242;QD=16.01;ReadPosRankSum=3.545;VQSLOD=5.3756;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:59.99:0,60,583	0/0:6,0:7:11.90:0,12,111	0/0:17,0:17:11.86:0,12,148	0/0:7,1:7:5.27:0,5,59	0/0:18,0:19:41.86:0,42,405	1/1:5,18:23:44.91:369,45,0	1/1:4,19:23:47.94:394,48,0	0/0:15,1:16:8.41:0,8,277	0/0:18,1:19:26.43:0,26,455	1/1:5,12:17:32.93:271,33,0	1/1:0,5:5:14.98:123,15,0	1/1:5,18:23:38.92:320,39,0	1/1:0,16:16:44.95:369,45,0	1/1:5,19:24:24.93:411,25,0	0/1:3,12:15:24.82:189,0,25	1/1:4,14:18:3.97:239,4,0	0/0:26,0:26:72.15:0,72,747	1/1:4,28:32:77.89:639,78,0	1/1:8,2:13:24.08:164,24,0	1/1:2,7:9:17.97:148,18,0	1/1:7,30:37:65.90:542,66,0	0/1:8,1:9:5.70:6,0,143	0/0:12,0:14:36.68:0,37,350	0/0:21,0:21:57.14:0,57,606	1/1:4,9:13:17.96:148,18,0	1/1:1,15:16:41.92:340,42,0	1/1:3,11:16:34:258,34,0	1/1:0,8:8:17.98:148,18,0
chr10	62478551	.	TC	T	13239.24	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=8.573;DP=473;FS=15.072;HRun=2;HaplotypeScore=109.0413;InbreedingCoeff=0.9833;MQ=86.87;MQ0=0;MQRankSum=-8.291;QD=34.57;ReadPosRankSum=2.676;VQSLOD=3.2832;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,23:24:66.21:856,66,0	1/1:0,8:8:24.08:311,24,0	0/0:24,0:24:69.22:0,69,1009	0/0:17,0:17:51.14:0,51,719	1/1:1,17:18:36.12:467,36,0	1/1:0,12:12:36.12:466,36,0	1/1:0,19:19:54.12:680,54,0	1/1:0,17:17:48.14:606,48,0	0/0:11,0:11:30.10:0,30,449	1/1:1,23:23:60.19:778,60,0	1/1:0,14:14:36.03:429,36,0	1/1:0,23:23:66.17:836,66,0	1/1:0,13:13:36.12:467,36,0	1/1:1,26:27:75.11:948,75,0	1/1:0,14:14:42.14:544,42,0	1/1:0,26:26:75.24:973,75,0	1/1:0,31:31:84.27:1089,84,0	1/1:0,16:16:39.13:506,39,0	1/1:1,5:6:15.05:195,15,0	1/1:0,16:16:42.14:545,42,0	1/1:0,23:23:54.13:682,54,0	0/0:9,0:9:27.09:0,27,405	0/0:4,0:4:12.04:0,12,180	0/0:25,0:25:75.25:0,75,1124	1/1:0,10:10:27.05:331,27,0	1/1:0,17:17:51.14:633,51,0	1/1:1,20:21:57.19:739,57,0	1/1:0,4:4:12.04:156,12,0
chr10	62478579	.	TCACCACCACCACCAC	T	18163.81	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=7.492;DP=384;FS=4.710;HRun=0;HaplotypeScore=195.0096;InbreedingCoeff=0.9246;MQ=58.19;MQ0=4;MQRankSum=-5.304;QD=59.17;ReadPosRankSum=2.834;VQSLOD=4.3515;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:10,6:16:35.97:854,36,0	1/1:5,1:6:9.01:200,9,0	0/0:18,0:14:11.94:0,12,520	0/0:13,0:10:20.32:0,20,576	1/1:6,4:10:11.54:432,12,0	1/1:7,4:11:27.03:784,27,0	1/1:11,5:16:12.80:1056,13,0	1/1:14,0:13:24.07:408,24,0	0/0:9,0:9:27.07:0,27,1238	1/1:10,5:14:24.04:746,24,0	1/1:5,7:12:24.05:820,24,0	1/1:14,12:26:66.20:2124,66,0	1/1:7,3:10:12.04:442,12,0	1/1:9,13:22:52.36:2001,52,0	1/1:6,8:14:42.10:1284,42,0	1/1:13,9:22:49.35:1484,49,0	1/1:14,7:21:46.32:1167,46,0	1/1:10,8:18:45.14:1275,45,0	1/1:9,3:12:30.06:690,30,0	1/1:6,3:9:14.65:481,15,0	1/1:20,3:23:24.05:421,24,0	0/0:8,0:8:18.03:0,18,653	0/0:5,0:5:15.05:0,15,749	0/0:24,0:24:54.19:0,54,3584	1/1:6,3:9:15.04:370,15,0	1/1:8,4:12:18.06:551,18,0	1/1:5,2:7:15.05:425,15,0	1/1:1,1:2:6:151,6,0
chr10	62479064	.	A	AC	7822.37	PASS	AB=0.897;AC=48;AF=0.857;AN=56;BaseQRankSum=-1.172;DP=665;FS=5.838;HRun=8;HaplotypeScore=101.9354;InbreedingCoeff=0.4717;MQ=69.51;MQ0=16;MQRankSum=-0.545;QD=12.72;ReadPosRankSum=6.214;VQSLOD=3.9108;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:32,0:30:64.78:438,65,0	0/1:5,0:5:12.27:12,0,16	0/0:22,0:20:14.52:0,15,294	0/0:28,0:24:41.40:0,41,366	1/1:16,0:15:38.58:262,39,0	1/1:15,0:15:20.82:154,21,0	1/1:34,0:34:73.89:473,74,0	0/1:24,0:24:48.57:49,0,64	1/1:4,25:29:57.13:642,57,0	1/1:22,0:23:42.72:250,43,0	1/1:15,0:16:19.79:156,20,0	1/1:48,0:48:99:698,100,0	1/1:24,0:23:50.49:357,50,0	1/1:26,0:26:52.96:384,53,0	1/1:35,0:34:80:538,80,0	1/1:30,0:30:76.94:508,77,0	0/1:23,0:23:43.91:44,0,44	1/1:24,0:23:59.29:400,59,0	1/1:22,1:23:44.22:264,44,0	1/1:14,1:15:38.58:275,39,0	1/1:53,0:55:99:746,101,0	1/1:7,0:7:5.53:43,6,0	1/1:7,0:7:4.82:29,5,0	0/1:7,0:23:0.21:0,0,0	1/1:16,0:16:34.57:253,35,0	1/1:22,1:21:48.80:314,49,0	1/1:30,0:28:62.20:427,62,0	1/1:6,0:6:16.67:107,17,0
chr10	62479071	.	C	CCA	7277.26	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-5.173;DP=673;FS=17.062;HRun=0;HaplotypeScore=118.0793;InbreedingCoeff=0.8354;MQ=66.28;MQ0=18;MQRankSum=-2.114;QD=13.18;ReadPosRankSum=4.958;VQSLOD=3.5006;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,0:29:69.25:391,69,0	1/1:1,6:7:15.01:214,15,0	0/0:25,0:19:5.52:0,6,353	0/0:30,0:25:43.04:0,43,499	1/1:0,0:17:40.32:212,40,0	1/1:1,0:13:18.14:92,18,0	1/1:0,0:27:71.97:379,72,0	1/1:6,28:34:84.03:1077,84,0	0/0:28,0:28:43.72:0,44,167	1/1:1,0:21:35.08:270,35,0	1/1:1,0:17:6.05:99,6,0	1/1:3,0:49:83.57:521,84,0	1/1:2,0:23:48.60:251,49,0	1/1:1,0:26:38.45:263,38,0	1/1:0,0:33:77.78:412,78,0	1/1:0,0:30:74.68:386,75,0	1/1:4,18:23:8.19:644,8,0	1/1:0,0:21:57.47:297,57,0	1/1:4,0:23:38.26:197,38,0	1/1:1,0:17:39.57:235,40,0	1/1:7,0:56:47.07:491,47,0	0/0:8,0:8:0.63:0,1,2	0/0:6,0:6:0:0,0,0	0/0:24,0:24:11.80:0,12,90	1/1:1,0:15:20.51:173,21,0	1/1:2,0:23:47.19:280,47,0	1/1:1,0:25:60.41:318,60,0	1/1:0,0:7:14.38:75,14,0
chr10	62482538	.	AT	A	1786.78	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-9.536;DP=518;FS=0.000;HRun=15;HaplotypeScore=87.0350;InbreedingCoeff=0.8721;MQ=74.21;MQ0=6;MQRankSum=2.360;QD=10.21;ReadPosRankSum=3.442;VQSLOD=3.2621;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,25:30:54.77:351,55,0	1/1:4,2:6:2.90:19,3,0	0/0:35,0:11:5.05:0,5,56	0/0:34,0:20:0.03:0,0,92	1/1:7,28:35:47.99:430,48,0	0/0:4,0:25:51.42:0,51,271	0/0:5,0:16:31.57:0,32,179	1/1:11,29:42:35.42:480,35,0	1/1:0,5:5:11.82:77,12,0	0/0:6,0:20:51.05:0,51,284	0/0:6,0:14:23.20:0,23,114	0/0:4,0:13:22.84:0,23,119	0/0:2,0:8:8.52:0,9,43	0/0:3,0:8:11.83:0,12,58	0/0:3,0:8:14.20:0,14,71	0/0:4,0:14:22.96:0,23,126	1/1:6,22:28:16.95:256,17,0	0/0:6,0:26:37.67:0,38,198	0/0:18,0:33:57.49:0,57,298	0/0:6,0:14:30.89:0,31,164	0/0:3,0:10:8.64:0,9,48	1/1:1,5:6:14.72:91,15,0	1/1:2,11:13:23.55:150,24,0	1/1:1,9:10:20.69:135,21,0	0/0:4,0:18:17.04:0,17,85	0/0:2,0:17:40.37:0,40,226	0/0:5,0:14:25.71:0,26,136	0/0:2,0:12:19.89:0,20,100
chr10	62483843	.	CT	C	168.41	PASS	AB=0.748;AC=6;AF=0.107;AN=56;BaseQRankSum=-3.855;DP=537;FS=0.745;HRun=17;HaplotypeScore=111.8959;InbreedingCoeff=0.4253;MQ=69.87;MQ0=3;MQRankSum=2.650;QD=2.63;ReadPosRankSum=4.919;VQSLOD=-0.2216;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:38:43.64:0,44,242	0/0:8,0:8:12.99:0,13,78	0/0:15,0:13:10.73:0,11,79	0/0:17,0:15:10.12:0,10,66	0/0:20,0:31:51.66:0,52,288	0/0:11,0:17:20.36:0,20,125	0/0:17,0:23:28.16:0,28,186	0/0:8,1:19:12.25:0,12,132	0/1:13,4:17:21.13:66,0,21	0/0:7,0:20:40.59:0,41,232	0/0:14,0:20:24.07:0,24,130	0/0:21,0:21:28.93:0,29,158	0/0:8,0:16:11.59:0,12,65	0/0:13,0:13:20.12:0,20,107	0/0:12,0:21:23.05:0,23,126	0/0:16,0:19:23.17:0,23,136	0/0:17,0:34:34.95:0,35,217	0/0:14,0:24:24.84:0,25,136	0/0:11,1:14:6.07:0,6,88	0/0:20,0:20:31.79:0,32,183	0/0:8,0:15:11.67:0,12,53	0/1:6,4:10:10.27:10,0,19	1/1:8,5:13:8.29:50,8,0	1/1:7,13:23:1.77:158,2,0	0/0:5,0:16:14.33:0,14,75	0/0:14,0:20:19.60:0,20,110	0/0:10,0:17:17.59:0,18,115	0/0:6,0:11:25.78:0,26,145
chr10	62484561	.	TGTGAGTAGCAGCAATGTCAGAACCCTGCAGATGGGTTC	T	31213.62	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=15.896;DP=568;FS=1.766;HRun=0;HaplotypeScore=442.4614;InbreedingCoeff=0.9100;MQ=97.04;MQ0=0;MQRankSum=-14.232;QD=112.28;ReadPosRankSum=8.170;VQSLOD=2.4773;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,120,16611	0/0:7,0:7:21.07:0,21,2806	0/0:33,0:33:96.33:0,96,6494	0/0:34,0:34:99:0,99,6216	0/0:15,0:15:45.15:0,45,6063	1/1:0,19:19:15.05:1478,15,0	1/1:2,17:19:6.02:591,6,0	0/0:38,0:38:99:0,111,8542	0/0:22,0:22:66.23:0,66,8442	1/1:0,14:14:29.89:1333,30,0	1/1:0,10:10:12.04:1049,12,0	1/1:0,25:26:42.14:4139,42,0	1/1:1,15:16:21.07:2070,21,0	1/1:1,13:14:15.05:1478,15,0	1/1:2,23:25:30.10:2957,30,0	1/1:2,32:34:57.20:5618,57,0	0/0:37,0:37:99:0,102,14649	1/1:1,4:5:3.01:294,3,0	1/1:1,12:13:36:1673,36,0	1/1:0,9:9:12.04:1183,12,0	1/1:0,20:20:3.01:257,3,0	0/0:16,0:16:39.13:0,39,4274	0/0:17,0:17:51.18:0,51,6348	0/0:29,0:29:81.28:0,81,11130	1/1:0,10:10:18.06:1774,18,0	1/1:1,17:18:48.01:2953,48,0	1/1:0,21:21:14.60:1478,15,0	1/1:2,3:5:9.03:887,9,0
chr10	62487752	.	T	TGTGTGT	8398.42	PASS	AB=1.000;AC=45;AF=0.804;AN=56;BaseQRankSum=-7.743;DP=926;FS=10.202;HRun=0;HaplotypeScore=239.9744;InbreedingCoeff=0.4823;MQ=48.00;MQ0=19;MQRankSum=-0.705;QD=10.89;ReadPosRankSum=-3.283;VQSLOD=1.7551;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:50,0:48:11.43:220,11,0	0/0:15,0:15:12.34:0,12,167	0/0:52,0:14:0:0,0,0	0/0:53,0:22:0.51:0,1,4	1/1:24,0:24:6.02:117,6,0	1/1:37,0:36:18:333,18,0	1/1:43,0:42:26.92:479,27,0	0/0:35,0:35:0.69:0,1,69	0/1:24,0:24:34:78,0,34	1/1:33,0:32:38.41:658,38,0	1/1:21,0:21:17.75:321,18,0	1/1:42,0:41:44.98:969,45,0	1/1:35,0:35:17.72:425,18,0	1/1:32,0:32:30.03:676,30,0	1/1:35,0:35:23.23:409,23,0	1/1:41,8:50:14.75:328,15,0	0/1:31,0:29:2.15:2,0,442	1/1:10,0:10:13.91:238,14,0	1/1:14,0:12:1.55:4,2,0	1/1:27,0:27:11.91:267,12,0	1/1:62,0:61:30.92:453,31,0	1/1:36,0:36:5.91:110,6,0	1/1:26,0:26:5.17:131,5,0	0/1:34,0:33:0.09:1,0,0	1/1:28,0:28:17.53:366,18,0	1/1:39,0:39:60.06:1076,60,0	1/1:28,0:28:24.52:472,25,0	1/1:10,0:10:15:266,15,0
chr10	62487798	.	GTGATGA	G	604.45	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.632;DP=735;FS=7.978;HRun=0;HaplotypeScore=183.2776;InbreedingCoeff=0.9441;MQ=53.26;MQ0=16;MQRankSum=-5.991;QD=24.18;ReadPosRankSum=-0.157;VQSLOD=2.6128;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:96.33:0,96,2624	0/0:14,0:14:30.10:0,30,940	0/0:29,0:13:9.90:0,10,221	0/0:40,0:24:41.82:0,42,783	0/0:18,0:19:47.95:0,48,1273	0/0:31,0:30:75.26:0,75,2261	0/0:25,0:25:21.43:0,21,1465	0/0:30,0:29:60.20:0,60,1342	1/1:3,21:25:36.12:699,36,0	0/0:36,0:32:81.09:0,81,1941	0/0:16,0:16:36.12:0,36,1213	0/0:36,0:36:93.25:0,93,2887	0/0:16,0:16:48.16:0,48,1421	0/0:27,0:27:75.26:0,75,2354	0/0:33,0:33:84.29:0,84,2662	0/0:36,0:36:99:0,105,3191	0/0:39,0:39:93.05:0,93,2568	0/0:11,0:11:33.11:0,33,949	0/0:13,0:10:27.09:0,27,708	0/0:20,0:20:54.19:0,54,1560	0/0:67,0:67:99:0,150,4553	0/0:17,0:17:33.11:0,33,1002	0/0:17,0:14:30.10:0,30,944	0/0:31,0:30:66.23:0,66,2085	0/0:17,0:17:33.11:0,33,1050	0/0:28,0:26:72.20:0,72,2173	0/0:18,0:17:42.14:0,42,1322	0/0:8,0:8:21.07:0,21,539
chr10	62487991	.	GA	G	12493.64	PASS	AB=0.600;AC=49;AF=0.875;AN=56;BaseQRankSum=-1.102;DP=659;FS=6.667;HRun=10;HaplotypeScore=74.5141;InbreedingCoeff=0.8456;MQ=75.41;MQ0=0;MQRankSum=-4.719;QD=21.07;ReadPosRankSum=2.901;VQSLOD=5.8710;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,38:43:99:907,105,0	0/1:3,6:9:0.61:135,0,1	0/0:25,0:25:3.37:0,3,375	0/0:19,0:19:29.99:0,30,300	1/1:3,26:29:68.98:596,69,0	1/1:5,32:37:53.79:696,54,0	1/1:0,18:18:47.99:416,48,0	1/1:10,31:41:92.61:802,93,0	0/0:22,0:22:57.15:0,57,629	1/1:4,33:37:95.96:833,96,0	1/1:1,14:15:38.99:339,39,0	1/1:2,24:26:62.99:547,63,0	1/1:1,15:16:35.98:313,36,0	1/1:2,16:18:41.99:365,42,0	1/1:2,20:22:53.98:469,54,0	1/1:1,32:33:86.98:755,87,0	1/1:4,13:17:35.98:313,36,0	1/1:3,13:16:35.96:306,36,0	1/1:2,19:21:56.95:485,57,0	1/1:1,21:22:50.96:442,51,0	1/1:1,16:17:44.99:391,45,0	1/1:1,28:29:71.97:624,72,0	1/1:2,17:19:47.99:417,48,0	1/1:1,24:25:62.99:547,63,0	1/1:0,16:16:44.99:391,45,0	1/1:6,21:27:62.98:547,63,0	1/1:0,25:25:68.99:599,69,0	1/1:2,13:15:29.99:260,30,0
chr10	62489190	.	A	AG	929.63	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-5.972;DP=670;FS=1.592;HRun=4;HaplotypeScore=65.3819;InbreedingCoeff=0.9646;MQ=88.73;MQ0=0;MQRankSum=-1.161;QD=34.43;ReadPosRankSum=1.704;VQSLOD=4.3229;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,99,1094	0/0:10,0:10:30.06:0,30,328	0/0:23,0:23:69.17:0,69,760	0/0:29,0:29:70.92:0,71,752	0/0:16,0:16:42.12:0,42,474	0/0:17,0:17:48.12:0,48,534	0/0:23,0:23:66.17:0,66,733	0/0:35,0:35:96.27:0,96,1089	1/1:0,27:27:75.25:1024,75,0	0/0:31,0:31:90.24:0,90,1006	0/0:16,0:16:48.14:0,48,544	0/0:40,0:40:99:0,117,1318	0/0:24,0:24:69.18:0,69,772	0/0:26,0:26:72.20:0,72,816	0/0:37,0:37:99:0,111,1249	0/0:35,1:35:55.24:0,55,1013	0/0:34,0:34:87.23:0,87,975	0/0:21,0:21:60.17:0,60,680	0/0:21,0:21:51.11:0,51,554	0/0:5,0:5:12:0,12,123	0/0:45,0:45:99:0,132,1472	0/0:10,0:10:27.07:0,27,294	0/0:11,0:11:33.09:0,33,374	0/0:21,0:20:63.17:0,63,706	0/0:9,0:9:21.06:0,21,238	0/0:21,0:21:57.16:0,57,646	0/0:25,0:25:69.20:0,69,782	0/0:20,0:20:57.16:0,57,645
chr10	62489540	.	CT	C	5428.66	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-1.523;DP=304;FS=6.904;HRun=5;HaplotypeScore=40.1439;InbreedingCoeff=0.5655;MQ=63.42;MQ0=3;MQRankSum=0.565;QD=18.98;ReadPosRankSum=0.806;VQSLOD=3.6211;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,6:6:14.91:151,15,0	1/1:0,6:6:15.04:170,15,0	0/0:5,0:4:3.01:0,3,41	0/0:7,0:6:6.02:0,6,79	1/1:11,0:11:24.07:296,24,0	1/1:0,4:4:12.03:136,12,0	1/1:0,6:6:18.05:204,18,0	1/1:3,47:49:99:1586,141,0	0/0:6,0:6:14.90:0,15,161	1/1:12,0:11:23.96:254,24,0	1/1:12,0:12:32.77:317,33,0	1/1:1,4:5:9.02:102,9,0	1/1:9,0:9:2.92:17,3,0	1/1:5,0:5:2.90:16,3,0	1/1:22,0:22:23.32:140,23,0	1/1:12,0:12:5.80:33,6,0	1/1:1,24:25:57.16:646,57,0	1/1:10,0:9:17.51:108,18,0	1/1:9,0:9:23.84:225,24,0	1/1:7,0:7:17.94:185,18,0	1/1:1,3:4:6.02:68,6,0	1/1:0,3:3:9.03:102,9,0	1/1:9,0:9:2.17:32,2,0	1/1:1,6:7:15.04:170,15,0	1/1:13,0:13:11.61:65,12,0	1/1:2,10:12:30.09:339,30,0	1/1:13,0:13:5.80:32,6,0	1/1:14,0:14:5.80:32,6,0
chr10	62489541	.	TTTTTA	T	5940.78	PASS	AB=1.000;AC=44;AF=0.786;AN=56;BaseQRankSum=-7.641;DP=297;FS=1.784;HRun=0;HaplotypeScore=54.0778;InbreedingCoeff=0.3297;MQ=63.26;MQ0=5;MQRankSum=1.834;QD=21.76;ReadPosRankSum=-0.714;VQSLOD=4.2708;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:6,0:6:0.18:121,0,0	0/1:6,0:6:58.19:87,0,58	0/0:5,0:4:3.01:0,3,41	0/0:5,0:4:6.02:0,6,79	1/1:10,0:10:1.08:211,1,0	0/1:4,0:4:24.67:90,0,25	1/1:6,0:6:18.05:204,18,0	1/1:51,0:48:95.25:1466,95,0	0/0:5,0:5:15.03:0,15,248	1/1:4,8:11:24.07:301,24,0	1/1:1,11:12:33.10:456,33,0	1/1:5,0:5:9.02:102,9,0	1/1:1,8:9:3.01:63,3,0	1/1:0,4:4:3.01:63,3,0	1/1:2,20:22:24.08:502,24,0	1/1:3,9:12:6.02:126,6,0	0/1:25,0:25:80.11:80,0,421	1/1:1,9:9:18.06:377,18,0	1/1:0,8:8:24.06:317,24,0	1/1:1,6:7:18.05:231,18,0	1/1:4,0:4:6.02:68,6,0	1/1:3,0:3:2.54:63,3,0	0/0:9,0:9:6.19:0,6,71	1/1:7,0:7:15.04:170,15,0	1/1:1,12:13:12.04:252,12,0	1/1:10,0:10:30.09:339,30,0	1/1:1,12:13:6.02:126,6,0	1/1:1,13:14:6.02:126,6,0
chr10	62489542	.	T	TTTATTTA	4686.02	PASS	AB=0.988;AC=30;AF=0.536;AN=56;BaseQRankSum=-8.815;DP=294;FS=10.848;HRun=0;HaplotypeScore=68.5514;InbreedingCoeff=0.1285;MQ=63.19;MQ0=5;MQRankSum=1.029;QD=21.11;ReadPosRankSum=-1.559;VQSLOD=2.5976;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,0:6:15.04:204,15,0	0/1:6,0:6:65.17:87,0,65	0/0:4,0:3:3.01:0,3,41	0/0:5,0:4:6.02:0,6,79	1/1:1,8:10:24.07:334,24,0	0/1:4,0:4:28.20:90,0,28	1/1:6,0:6:18.05:204,18,0	1/1:51,0:48:99:1550,127,0	0/1:6,0:7:84.03:274,0,84	0/1:11,0:10:12.98:214,0,13	0/1:12,0:12:82.29:264,0,82	1/1:5,0:5:9.02:102,9,0	0/0:8,0:8:0.89:0,1,2	0/0:4,0:4:3.01:0,3,40	0/1:21,0:21:1.65:2,0,239	0/0:12,0:12:6.02:0,6,79	0/1:26,0:26:99:138,0,337	0/1:10,0:9:8.65:9,0,180	0/1:8,0:8:55.13:167,0,55	0/1:7,0:7:21.54:150,0,22	1/1:4,0:4:6.02:68,6,0	1/1:3,0:3:9.03:102,9,0	1/1:0,7:8:6.83:218,7,0	1/1:7,0:7:15.04:170,15,0	0/0:13,0:13:8.14:0,8,117	1/1:10,0:10:30.09:339,30,0	0/0:13,0:13:6.01:0,6,65	0/0:13,0:13:6.02:0,6,79
chr10	62495433	.	AAC	A	642.11	PASS	AB=0.920;AC=34;AF=0.739;AN=46;BaseQRankSum=3.909;DP=580;FS=5.207;HRun=0;HaplotypeScore=89.2883;InbreedingCoeff=0.3387;MQ=67.87;MQ0=11;MQRankSum=0.359;QD=1.74;ReadPosRankSum=3.043;VQSLOD=0.8933;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:23:0.47:1,0,0	1/1:6,0:10:8.36:38,8,0	./.	./.	1/1:15,0:20:2.84:14,3,0	0/0:17,0:16:6.02:0,6,87	0/0:29,0:33:5.95:0,6,49	./.	1/1:21,1:22:3.89:34,4,0	0/0:18,0:17:0.47:0,0,1	1/1:17,1:18:8.14:54,8,0	1/1:22,5:27:9.02:96,9,0	./.	0/0:15,0:15:15.02:0,15,178	1/1:18,6:23:3:32,3,0	0/1:17,1:21:12.05:59,0,12	1/1:26,0:33:5.68:28,6,0	1/1:11,11:22:11.64:127,12,0	1/1:12,0:14:1.98:12,2,0	1/1:10,0:11:2.84:14,3,0	0/1:42,0:41:3.25:58,0,3	./.	1/1:8,0:8:2.80:13,3,0	1/1:20,0:27:10.74:49,11,0	1/1:13,0:16:5.85:46,6,0	0/0:11,0:11:0.47:0,0,1	1/1:11,0:12:2.84:14,3,0	1/1:12,3:16:8.86:78,9,0
chr10	62495613	.	TCGCG	T	1121.48	PASS	AB=0.901;AC=9;AF=0.161;AN=56;BaseQRankSum=5.418;DP=708;FS=18.766;HRun=0;HaplotypeScore=135.5882;InbreedingCoeff=0.3740;MQ=60.99;MQ0=29;MQRankSum=-0.918;QD=7.68;ReadPosRankSum=2.757;VQSLOD=1.4541;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:38:43.90:0,44,612	0/0:14,0:12:20.33:0,20,352	0/0:20,0:6:1.04:0,1,100	0/0:35,0:11:19.80:0,20,190	0/0:24,0:23:28.12:0,28,346	0/0:18,0:16:21.03:0,21,296	0/0:35,0:35:23.80:0,24,369	0/1:31,1:31:26.40:26,0,976	0/1:22,0:22:4.70:5,0,179	0/0:34,0:32:48.20:0,48,692	0/0:19,0:18:11.47:0,11,131	0/0:34,0:34:46.63:0,47,627	0/0:24,0:23:29.78:0,30,364	0/0:22,0:22:28.49:0,28,344	0/0:29,0:29:36.07:0,36,498	0/0:30,0:30:33.40:0,33,549	0/0:31,1:30:57.56:0,58,764	0/0:19,0:19:27.52:0,28,378	0/0:18,0:14:28.43:0,28,332	0/0:19,0:18:23.96:0,24,253	0/0:58,0:56:75.13:0,75,959	1/1:17,1:19:39.12:620,39,0	0/1:2,14:16:0:0,0,0	1/1:22,4:25:32.99:531,33,0	0/0:23,0:21:14.78:0,15,214	0/1:18,0:18:20.16:20,0,287	0/0:13,0:12:0.95:0,1,89	0/1:13,0:12:14.34:61,0,14
chr10	62495617	.	GCTCTCT	G	1683.93	PASS	AB=0.986;AC=23;AF=0.500;AN=46;BaseQRankSum=-1.128;DP=719;FS=6.415;HRun=0;HaplotypeScore=147.0979;InbreedingCoeff=0.6341;MQ=59.51;MQ0=40;MQRankSum=1.699;QD=5.65;ReadPosRankSum=1.111;VQSLOD=2.3090;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:39:14.59:0,15,148	0/0:16,0:14:10.45:0,10,159	./.	./.	0/0:24,0:23:2.80:0,3,9	0/0:19,1:18:0:0,0,0	./.	0/0:29,0:27:11.98:0,12,122	0/0:20,0:20:18.03:0,18,347	1/1:32,0:31:35.98:611,36,0	0/1:19,0:18:0.26:0,0,0	1/1:33,1:34:6.02:84,6,0	0/1:22,0:22:0:0,0,0	1/1:24,0:24:2.99:52,3,0	0/0:26,0:26:0:0,0,0	1/1:32,0:33:2.90:52,3,0	0/0:33,0:30:13.82:0,14,399	1/1:20,0:20:1.85:15,2,0	1/1:14,0:15:14.60:230,15,0	1/1:22,0:21:0.32:1,0,0	./.	0/0:22,0:22:11.51:0,12,100	./.	0/0:29,0:27:13.86:0,14,127	0/1:22,0:20:0:0,0,0	1/1:19,0:17:23.47:421,23,0	1/1:4,8:12:5.65:61,6,0	1/1:14,0:12:29.91:303,30,0
chr10	62495650	.	CTCTCTCTCTG	C	2625.37	PASS	AB=1.000;AC=27;AF=0.500;AN=54;BaseQRankSum=-0.403;DP=738;FS=4.249;HRun=0;HaplotypeScore=162.5284;InbreedingCoeff=0.1779;MQ=53.76;MQ0=39;MQRankSum=5.460;QD=5.40;ReadPosRankSum=-1.406;VQSLOD=2.5754;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:44:15.05:0,15,309	0/1:16,0:14:5.37:5,0,235	./.	0/0:17,0:5:9:0,9,92	0/0:30,0:30:6.23:0,6,64	0/0:23,0:21:3:0,3,25	0/0:39,0:39:6.40:0,6,43	0/1:21,0:18:60.64:61,0,282	0/1:17,0:17:64.24:64,0,436	0/1:44,0:42:26.99:725,0,27	0/0:17,2:18:2.61:0,3,25	0/1:37,0:36:13.16:63,0,13	0/0:22,0:21:0.47:0,0,1	1/1:26,0:26:3.01:41,3,0	0/0:25,1:25:2.98:0,3,22	1/1:29,1:30:2.72:41,3,0	0/1:28,0:25:10.01:10,0,563	1/1:22,0:21:19.29:149,19,0	1/1:17,0:13:11.08:319,11,0	1/1:28,0:27:3.14:19,3,0	1/1:54,0:49:16.28:228,16,0	0/0:24,0:24:12.04:0,12,200	1/1:19,0:18:11.35:56,11,0	0/1:36,0:34:37.82:38,0,258	0/1:23,0:21:0:0,0,0	1/1:24,0:22:38.95:516,39,0	1/1:23,0:22:30.31:363,30,0	0/1:21,0:19:59.94:92,0,60
chr10	62495652	.	CTCTCTCTG	C	3988.73	PASS	AB=0.852;AC=31;AF=0.574;AN=54;BaseQRankSum=-2.519;DP=731;FS=1.298;HRun=0;HaplotypeScore=149.6470;InbreedingCoeff=0.2260;MQ=54.18;MQ0=36;MQRankSum=4.312;QD=7.75;ReadPosRankSum=0.089;VQSLOD=2.7577;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:46,1:43:14.74:0,15,187	0/1:16,0:14:6.66:7,0,170	./.	0/1:11,0:5:13.18:13,0,46	0/0:30,0:30:5.98:0,6,38	0/0:4,18:20:0:0,0,0	0/0:5,35:40:3.41:0,3,19	0/1:22,0:19:73.82:74,0,189	0/1:17,0:17:69.90:70,0,275	1/1:14,29:42:59.87:1001,60,0	0/1:6,13:18:0.26:0,0,0	0/1:5,31:35:11.97:165,0,12	0/0:5,17:21:0.47:0,0,1	1/1:1,25:26:3.01:86,3,0	0/0:6,21:26:2.98:0,3,22	1/1:3,27:30:3.37:87,3,0	0/1:27,0:24:10.55:11,0,407	1/1:11,0:21:20.21:213,20,0	1/1:18,0:14:32.94:419,33,0	1/1:3,25:27:3.28:19,3,0	1/1:54,0:49:16.20:228,16,0	0/0:24,0:24:11.51:0,12,100	1/1:19,0:18:11.35:57,11,0	0/1:36,0:34:41.62:42,0,101	0/1:3,21:22:0:0,0,0	1/1:5,19:22:53.95:785,54,0	1/1:23,0:22:30.32:341,30,0	1/1:19,1:19:45.53:371,46,0
chr10	62495656	.	CTCTG	C	2771.45	PASS	AB=0.927;AC=36;AF=0.692;AN=52;BaseQRankSum=-0.913;DP=719;FS=0.731;HRun=0;HaplotypeScore=134.2811;InbreedingCoeff=-0.0590;MQ=55.44;MQ0=30;MQRankSum=4.037;QD=4.42;ReadPosRankSum=0.098;VQSLOD=2.2965;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:8,38:42:11.81:53,0,12	0/1:13,0:11:16.92:17,0,21	./.	0/1:10,0:6:13.18:13,0,46	0/1:8,22:30:17.57:53,0,18	./.	0/0:38,0:38:2.77:0,3,18	0/1:22,0:20:16.41:90,0,16	0/1:16,0:16:80.13:94,0,80	1/1:42,0:42:56.35:508,56,0	0/1:17,0:16:0.07:1,0,0	0/1:35,0:34:11.96:78,0,12	0/1:21,0:20:0:0,0,0	1/1:26,0:26:2.98:39,3,0	0/0:27,0:26:2.98:0,3,22	1/1:30,0:30:2.90:39,3,0	0/1:26,0:24:47.38:47,0,76	1/1:22,0:21:22.93:183,23,0	0/1:21,0:17:16.64:203,0,17	1/1:28,0:27:2.42:17,2,0	1/1:56,0:52:25.47:292,25,0	1/1:23,0:23:1.24:26,1,0	1/1:19,0:18:11.40:57,11,0	1/1:35,0:33:15.87:111,16,0	0/1:23,0:22:0:0,0,0	1/1:23,0:22:47.31:357,47,0	1/1:23,0:22:21.11:246,21,0	1/1:20,0:19:50.53:384,51,0
chr10	62495658	.	CTG	C	2392.33	PASS	AB=1.000;AC=37;AF=0.740;AN=50;BaseQRankSum=0.979;DP=715;FS=0.000;HRun=0;HaplotypeScore=127.4744;InbreedingCoeff=0.1725;MQ=55.58;MQ0=26;MQRankSum=2.309;QD=4.30;ReadPosRankSum=0.920;VQSLOD=2.3157;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:45,0:41:2.83:26,3,0	1/1:10,0:10:11.81:74,12,0	./.	0/1:10,0:6:13.18:13,0,46	0/1:30,0:30:17.08:21,0,17	./.	0/0:38,0:38:2.77:0,3,18	1/1:13,0:19:1.13:96,1,0	1/1:15,0:15:17.57:132,18,0	1/1:42,0:42:25.59:355,26,0	0/1:17,0:16:0.21:1,0,0	0/1:35,0:34:11.98:62,0,12	0/0:21,0:20:0:0,0,0	1/1:26,0:26:2.97:25,3,0	0/0:27,0:26:2.98:0,3,22	1/1:30,0:30:2.82:25,3,0	1/1:24,1:25:7.05:131,7,0	1/1:22,0:21:25.15:187,25,0	0/1:21,0:17:25.98:156,0,26	1/1:29,0:28:2.61:18,3,0	1/1:56,0:52:25.89:293,26,0	./.	1/1:18,0:18:11.82:75,12,0	1/1:10,22:33:11.68:67,12,0	0/0:23,0:22:0:0,0,0	1/1:23,0:22:37.87:295,38,0	1/1:24,0:24:33.04:288,33,0	1/1:19,0:19:23.85:177,24,0
chr10	62496397	.	CA	C	2100.11	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=9.431;DP=553;FS=1.865;HRun=10;HaplotypeScore=74.0052;InbreedingCoeff=0.8485;MQ=68.36;MQ0=5;MQRankSum=-0.940;QD=16.80;ReadPosRankSum=0.505;VQSLOD=4.1251;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,31:35:59.77:743,60,0	1/1:0,5:5:11.83:82,12,0	0/0:22,1:16:6.95:0,7,266	0/0:13,1:11:11.81:0,12,88	1/1:2,31:33:86.96:754,87,0	0/0:16,0:18:46.01:0,46,447	0/0:24,0:25:52.20:0,52,634	1/1:7,10:17:38.99:338,39,0	0/0:14,0:14:11.52:0,12,68	0/0:24,0:24:66.01:0,66,711	0/0:17,0:17:48.13:0,48,531	0/0:15,1:16:16.72:0,17,278	0/0:20,0:20:48.13:0,48,531	0/0:17,0:17:42.11:0,42,461	0/0:18,0:19:47.95:0,48,505	0/0:20,0:20:57.15:0,57,623	1/1:5,11:16:42.40:353,42,0	0/0:21,0:21:60.10:0,60,640	0/0:14,0:13:33.09:0,33,365	0/0:27,0:27:72.19:0,72,797	0/0:21,0:21:48.13:0,48,531	0/1:19,0:19:0.18:0,0,104	0/0:17,0:17:9.75:0,10,184	0/0:19,0:19:12.72:0,13,180	0/0:14,1:15:10.02:0,10,328	0/0:25,0:26:69:0,69,731	0/0:19,2:21:5.13:0,5,496	0/0:19,0:19:51.11:0,51,552
chr10	62496402	.	AAAAAACAAAAAC	A	2280.36	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=8.513;DP=563;FS=3.235;HRun=0;HaplotypeScore=192.6175;InbreedingCoeff=0.9311;MQ=63.71;MQ0=5;MQRankSum=-8.161;QD=27.47;ReadPosRankSum=-0.497;VQSLOD=3.0870;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:93.02:0,93,3647	1/1:5,0:5:12.04:289,12,0	0/0:22,0:15:27.20:0,27,782	0/0:14,0:10:14.79:0,15,334	0/0:33,0:33:81.24:0,81,3022	0/0:19,0:19:45.15:0,45,2284	0/0:26,0:26:63.19:0,63,3024	0/1:15,0:15:0:0,0,0	0/0:1,0:21:9.03:0,9,466	0/0:27,0:26:66.22:0,66,2764	0/0:20,0:20:51.16:0,51,2353	0/0:15,0:15:36.12:0,36,1739	0/0:21,0:21:39.14:0,39,1938	0/0:17,0:17:33.11:0,33,1507	0/0:21,0:21:57.18:0,57,2933	0/0:21,0:21:57.19:0,57,2750	1/1:15,0:15:20.93:306,21,0	0/0:21,0:21:59.57:0,60,2919	0/0:18,0:17:48.11:0,48,2100	0/0:25,0:25:66.21:0,66,3246	0/0:19,0:19:51.08:0,51,2111	1/1:4,14:18:27.05:796,27,0	1/1:5,9:14:26.97:696,27,0	1/1:5,11:16:12.04:363,12,0	0/0:14,0:14:39.13:0,39,1894	0/0:27,0:27:72.25:0,72,3777	0/0:23,0:23:54.18:0,54,2599	0/0:21,0:21:54.19:0,54,2635
chr10	62496408	.	CAAAAACAAAAACAAAAACAA	C	999.99	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=4.782;DP=570;FS=0.000;HRun=0;HaplotypeScore=289.5431;InbreedingCoeff=0.8942;MQ=61.09;MQ0=5;MQRankSum=-5.299;QD=31.25;ReadPosRankSum=-0.101;VQSLOD=2.0941;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:35:96.08:0,96,6775	1/1:1,4:5:12.04:585,12,0	0/0:23,0:15:34:0,34,1749	0/0:14,0:10:17.80:0,18,682	0/0:33,0:34:90.27:0,90,6128	0/0:18,0:18:48.16:0,48,3971	0/0:27,0:27:75.24:0,75,5734	0/1:13,0:14:0:0,0,0	0/0:20,0:20:15.05:0,15,1176	0/0:27,0:26:72.25:0,72,5165	0/0:22,0:22:60.19:0,60,4467	0/0:17,0:17:48.16:0,48,3653	0/0:22,0:22:46.48:0,46,3785	0/0:17,0:17:42.14:0,42,3033	0/0:23,0:23:63.20:0,63,5176	0/0:26,0:26:72.25:0,72,5489	1/1:9,4:13:20.93:529,21,0	0/0:21,0:21:60.20:0,60,4837	0/0:21,0:20:57.19:0,57,3805	0/0:25,0:25:66.21:0,66,5302	0/0:20,0:20:60.11:0,60,3928	0/0:16,0:16:26.90:0,27,284	0/0:14,0:14:26.94:0,27,347	0/0:15,0:15:14.96:0,15,161	0/0:15,0:15:42.14:0,42,3344	0/0:25,0:25:75.26:0,75,6519	0/0:22,0:22:60.21:0,60,4778	0/0:19,0:19:54.19:0,54,4449
chr10	62496426	.	CAA	C	847.83	PASS	AB=1.000;AC=8;AF=0.143;AN=56;BaseQRankSum=9.197;DP=600;FS=4.449;HRun=7;HaplotypeScore=92.9492;InbreedingCoeff=0.7161;MQ=60.12;MQ0=2;MQRankSum=-6.151;QD=12.11;ReadPosRankSum=-1.560;VQSLOD=0.2906;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:85.79:0,86,1544	1/1:4,1:5:15.03:151,15,0	0/0:19,0:14:39.07:0,39,581	0/0:14,0:11:19.46:0,19,311	0/0:37,0:37:99:0,108,1801	0/0:18,0:18:48.06:0,48,794	0/0:25,0:25:72.23:0,72,1207	1/1:3,19:22:60.08:672,60,0	0/0:21,0:21:27.09:0,27,442	0/0:28,0:28:81.26:0,81,1322	0/0:23,0:23:66.21:0,66,1093	0/0:16,0:16:48.16:0,48,820	0/0:23,0:23:63.15:0,63,974	0/0:16,0:16:48.16:0,48,789	0/0:26,0:26:75.25:0,75,1271	0/0:26,0:26:78.25:0,78,1327	1/1:5,9:14:7.63:151,8,0	0/0:24,0:24:69.22:0,69,1150	0/0:27,0:27:77.93:0,78,1165	0/0:25,0:25:75.26:0,75,1282	0/0:19,0:19:57.19:0,57,975	0/1:16,0:16:13.22:13,0,107	0/1:13,0:13:1.56:2,0,148	0/0:17,0:17:9.21:0,9,289	0/0:18,0:18:51.15:0,51,853	0/0:30,0:30:90.30:0,90,1510	0/0:24,0:24:72.21:0,72,1169	0/0:21,0:21:48.16:0,48,822
chr10	62500123	.	TAC	T	1481.54	PASS	AB=0.971;AC=22;AF=0.393;AN=56;BaseQRankSum=10.218;DP=455;FS=29.345;HRun=0;HaplotypeScore=78.3288;InbreedingCoeff=0.0042;MQ=77.42;MQ0=1;MQRankSum=-1.250;QD=4.89;ReadPosRankSum=10.573;VQSLOD=0.1988;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:52.85:0,53,680	0/0:6,0:6:17.94:0,18,198	0/0:28,0:19:31.07:0,31,302	0/0:16,0:12:29.13:0,29,395	0/0:8,0:8:20.97:0,21,250	0/1:22,1:23:89.69:115,0,90	0/1:23,0:23:1.05:122,0,1	0/0:15,0:15:39.05:0,39,499	0/1:12,0:14:26.68:27,0,58	1/1:14,0:14:0.45:86,0,0	1/1:12,1:13:14.77:153,15,0	0/1:18,0:18:35.07:53,0,35	0/1:12,0:12:28.35:50,0,28	0/1:9,1:10:44.22:71,0,44	0/1:18,0:18:8.39:93,0,8	0/1:15,0:15:33.41:75,0,33	0/0:24,0:24:41.99:0,42,566	1/1:25,0:26:28.97:134,29,0	0/1:13,0:13:22.02:35,0,22	1/1:7,0:7:16.07:71,16,0	0/1:19,0:19:9.60:69,0,10	0/0:7,0:7:18.01:0,18,242	0/0:10,0:10:15.01:0,15,346	0/0:18,0:18:45.13:0,45,813	0/1:17,0:17:18.75:120,0,19	0/1:18,1:19:18.82:106,0,19	0/1:23,2:26:2.37:202,0,2	0/1:16,0:16:9.92:76,0,10
chr10	62500124	.	ACC	A	6587.17	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-0.773;DP=456;FS=39.462;HRun=11;HaplotypeScore=63.7232;InbreedingCoeff=0.9660;MQ=76.40;MQ0=1;MQRankSum=-1.313;QD=21.88;ReadPosRankSum=6.881;VQSLOD=1.1308;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:17.22:0,17,353	0/0:6,0:6:6.02:0,6,81	0/0:26,0:17:17.21:0,17,120	0/0:19,0:14:28.06:0,28,254	0/0:8,0:8:12.02:0,12,130	1/1:8,15:23:42.06:436,42,0	1/1:1,21:22:48.12:511,48,0	0/0:7,0:16:24.01:0,24,254	1/1:13,0:14:29.14:174,29,0	1/1:2,12:14:36.09:381,36,0	1/1:5,8:13:30.02:300,30,0	1/1:3,15:18:30.06:319,30,0	1/1:2,10:12:17.28:190,17,0	1/1:4,6:10:18.02:192,18,0	1/1:2,16:18:42.09:447,42,0	1/1:3,12:15:30.05:319,30,0	0/0:14,0:27:27.07:0,27,357	1/1:2,22:26:59.54:584,60,0	1/1:3,10:13:30.07:315,30,0	1/1:0,7:7:18.05:192,18,0	1/1:2,17:19:42.10:447,42,0	0/0:7,0:7:12:0,12,148	0/0:8,0:9:18.06:0,18,253	0/0:16,0:17:42.10:0,42,610	1/1:2,14:17:33.02:339,33,0	1/1:4,15:19:45.08:475,45,0	1/1:5,20:25:54.09:563,54,0	1/1:3,13:16:39.06:404,39,0
chr10	62500133	.	CCCA	C	278.73	PASS	AB=0.976;AC=11;AF=0.196;AN=56;BaseQRankSum=0.591;DP=478;FS=0.684;HRun=0;HaplotypeScore=94.7092;InbreedingCoeff=-0.0301;MQ=75.87;MQ0=3;MQRankSum=1.822;QD=1.53;ReadPosRankSum=-0.106;VQSLOD=1.4711;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:33.56:0,34,331	0/0:4,0:4:12.01:0,12,142	0/0:27,0:15:29.42:0,29,243	0/0:27,0:18:8.15:0,8,313	0/1:6,0:6:16.12:16,0,99	0/1:20,1:21:25.69:26,0,104	0/0:21,0:21:8.86:0,9,29	0/0:18,0:18:48.49:0,48,511	1/1:15,1:16:24.18:121,24,0	0/1:16,0:16:49.84:74,0,50	0/1:14,2:16:99:105,0,108	0/0:19,0:19:20.74:0,21,109	0/0:10,0:10:5.79:0,6,15	0/0:9,0:9:10.41:0,10,67	0/0:16,0:16:12.40:0,12,33	0/0:12,0:12:8.86:0,9,24	0/0:26,0:26:48.06:0,48,676	0/1:31,0:31:2.59:3,0,129	0/1:13,0:13:7.54:8,0,77	0/0:9,0:9:14.24:0,14,78	0/0:23,0:23:23.71:0,24,186	0/0:7,0:7:20.93:0,21,214	0/0:8,0:8:21.06:0,21,350	0/0:21,0:21:54.54:0,55,863	0/0:17,0:17:11.71:0,12,71	0/1:22,0:22:21.99:22,0,163	0/1:25,0:25:23.81:24,0,66	0/1:15,1:16:28.50:28,0,59
chr10	62500135	.	CA	C	215.31	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=0.378;DP=526;FS=1.698;HRun=9;HaplotypeScore=84.1886;InbreedingCoeff=0.9430;MQ=75.65;MQ0=3;MQRankSum=-0.170;QD=4.49;ReadPosRankSum=1.149;VQSLOD=0.5827;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,19:26:14.64:121,15,0	0/0:5,0:5:11.96:0,12,98	0/0:28,0:16:16.98:0,17,121	0/0:28,0:19:15.68:0,16,148	1/1:2,5:7:8.84:61,9,0	0/0:21,0:21:36.78:0,37,329	0/0:23,0:23:52.71:0,53,331	0/0:20,0:20:42.41:0,42,358	1/1:13,2:15:29.22:167,29,0	0/0:16,0:16:22.42:0,22,201	0/0:17,0:17:19.66:0,20,221	0/0:20,0:20:43.28:0,43,274	0/0:13,0:13:23.68:0,24,164	0/0:10,0:10:26.15:0,26,169	0/0:17,0:17:44.37:0,44,294	0/0:14,0:14:32.55:0,33,217	0/0:31,0:31:53.88:0,54,451	0/0:32,0:32:76.53:0,77,493	0/0:15,0:15:39.46:0,39,285	0/0:14,0:14:38.70:0,39,283	0/0:24,0:24:62.05:0,62,425	0/0:10,0:10:20.94:0,21,173	0/0:8,0:9:17.86:0,18,167	0/0:25,0:25:44.97:0,45,414	0/0:22,0:22:49.01:0,49,347	0/0:23,0:23:57.69:0,58,424	0/0:25,0:25:42.64:0,43,338	0/0:16,0:16:27.85:0,28,241
chr10	62505274	.	TAAC	T	2964.50	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.766;DP=690;FS=9.836;HRun=0;HaplotypeScore=98.2371;InbreedingCoeff=0.9994;MQ=87.32;MQ0=0;MQRankSum=-3.537;QD=45.61;ReadPosRankSum=1.459;VQSLOD=5.4357;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,117,2702	1/1:0,14:14:42.14:741,42,0	0/0:26,0:26:75.26:0,75,1682	0/0:21,0:21:56.81:0,57,1151	0/0:27,0:27:81.28:0,81,1892	0/0:30,0:30:90.31:0,90,2105	0/0:31,0:31:93.32:0,93,2196	1/1:0,18:18:54.17:917,54,0	0/0:21,0:21:63.22:0,63,1488	0/0:18,0:18:51.17:0,51,1156	0/0:12,0:12:30.10:0,30,693	0/0:26,0:26:75.21:0,75,1702	0/0:21,0:21:63.22:0,63,1455	0/0:24,0:24:72.25:0,72,1703	0/0:18,0:18:54.19:0,54,1256	0/0:32,0:32:93.32:0,93,2191	1/1:1,32:33:84.24:1449,84,0	0/0:25,0:25:75.26:0,75,1767	0/0:10,0:10:27.09:0,27,615	0/0:24,0:24:72.25:0,72,1701	0/0:38,0:38:99:0,111,2623	0/0:31,0:31:93.32:0,93,2130	0/0:21,0:21:63.22:0,63,1489	0/0:44,0:44:99:0,132,3071	0/0:21,0:21:63.21:0,63,1424	0/0:27,0:27:78.27:0,78,1843	0/0:25,0:25:72.25:0,72,1699	0/0:13,0:13:36.57:0,37,760
chr10	62505908	.	TCACACACA	T	808.32	PASS	AB=0.714;AC=5;AF=0.093;AN=54;BaseQRankSum=-3.404;DP=545;FS=19.549;HRun=0;HaplotypeScore=133.5703;InbreedingCoeff=0.6504;MQ=65.75;MQ0=23;MQRankSum=2.333;QD=14.70;ReadPosRankSum=0.796;VQSLOD=1.4220;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:25:5.79:0,6,186	0/0:8,0:7:6:0,6,120	0/0:38,0:16:3.01:0,3,30	./.	0/0:11,0:9:19.86:0,20,257	0/0:16,0:16:18.06:0,18,523	0/0:17,0:16:18.06:0,18,564	0/0:18,0:18:18.06:0,18,404	0/0:23,0:22:30.10:0,30,921	0/0:25,0:25:33.10:0,33,863	0/0:14,0:13:9.03:0,9,243	0/0:22,0:22:24.08:0,24,759	0/0:16,0:16:21.07:0,21,592	0/0:11,0:11:17.65:0,18,495	0/0:28,0:28:18.95:0,19,587	0/0:24,0:24:33.11:0,33,927	0/0:17,0:15:18.04:0,18,459	0/0:12,0:12:21.06:0,21,538	0/0:17,0:14:9.03:0,9,303	0/0:20,0:20:21.07:0,21,654	0/0:26,0:24:18.53:0,19,562	0/1:6,4:10:0.03:0,0,0	1/1:9,0:9:3.01:75,3,0	1/1:36,0:35:36.12:841,36,0	0/0:20,0:20:24.08:0,24,752	0/0:9,0:9:27.09:0,27,816	0/0:21,0:20:18.39:0,18,387	0/0:12,0:11:24.08:0,24,652
chr10	62505949	.	CAGAGAGAGAGAGAGAG	C	3029.15	PASS	AB=0.818;AC=20;AF=0.400;AN=50;BaseQRankSum=2.282;DP=490;FS=61.181;HRun=0;HaplotypeScore=185.5344;InbreedingCoeff=0.0071;MQ=41.45;MQ0=36;MQRankSum=-4.938;QD=10.52;ReadPosRankSum=0.364;VQSLOD=0.4395;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:26:29.03:0,29,1327	0/0:5,0:6:2.93:0,3,35	./.	./.	0/0:14,0:12:2.89:0,3,86	1/1:13,6:20:2.20:123,2,0	0/0:21,0:17:0.47:0,0,2	0/0:20,0:20:9.49:0,9,102	0/1:19,0:25:41.88:56,0,42	1/1:14,9:25:22.06:903,22,0	0/1:9,3:11:0.21:0,0,0	1/1:12,9:21:3.01:128,3,0	./.	1/1:13,4:16:2.73:124,3,0	0/0:19,5:25:5.92:0,6,39	0/1:18,10:28:8.70:248,0,9	0/0:10,0:7:3.38:0,3,38	1/1:13,1:14:8.86:376,9,0	0/1:12,3:12:16.69:260,0,17	0/1:17,4:21:13.88:31,0,14	0/0:22,0:17:0.47:0,0,1	0/1:11,0:10:6.18:6,0,42	0/0:13,0:13:6.49:0,6,134	0/0:29,0:26:23.30:0,23,361	0/1:16,2:22:22.51:123,0,23	0/1:15,3:18:86.11:551,0,86	0/1:12,5:15:13.14:123,0,13	0/1:10,0:9:18.15:118,0,18
chr10	62506673	.	G	GA	1455.64	PASS	AB=0.746;AC=10;AF=0.179;AN=56;BaseQRankSum=-4.836;DP=581;FS=3.542;HRun=13;HaplotypeScore=80.7878;InbreedingCoeff=0.6882;MQ=68.65;MQ0=1;MQRankSum=0.790;QD=9.90;ReadPosRankSum=-0.616;VQSLOD=3.0909;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:24,16:42:88.04:748,88,0	0/0:0,0:9:12.15:0,12,34	0/0:29,0:22:31.13:0,31,186	0/0:20,0:14:18.07:0,18,103	1/1:4,20:24:41.91:366,42,0	0/0:24,0:24:41.50:0,41,284	0/0:11,0:13:33.79:0,34,217	0/0:15,0:35:42.83:0,43,143	0/0:21,0:21:40.39:0,40,271	0/1:17,2:19:24.49:24,0,179	0/0:10,0:12:16.01:0,16,112	0/0:14,0:15:16.65:0,17,201	0/0:16,0:16:10.77:0,11,217	0/0:14,0:17:27.29:0,27,158	0/0:23,0:24:53.36:0,53,344	0/0:15,1:17:18.83:0,19,265	0/0:6,0:27:25.92:0,26,75	0/0:21,1:23:23.97:0,24,285	0/0:17,0:19:48.58:0,49,316	0/0:21,0:23:53.04:0,53,355	0/0:14,0:15:24.74:0,25,151	1/1:4,9:13:3.39:66,3,0	0/1:6,14:20:11.03:47,0,11	1/1:7,21:29:20.82:364,21,0	0/0:14,1:16:9.21:0,9,191	0/0:18,0:18:34.41:0,34,235	0/0:23,0:24:38.99:0,39,289	0/0:12,0:12:25.79:0,26,170
chr10	62507138	.	G	GA	493.86	PASS	AB=0.571;AC=5;AF=0.096;AN=52;BaseQRankSum=2.895;DP=346;FS=1.910;HRun=7;HaplotypeScore=66.3224;InbreedingCoeff=0.5751;MQ=38.43;MQ0=31;MQRankSum=-4.754;QD=10.74;ReadPosRankSum=0.294;VQSLOD=1.8173;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:18:12.78:0,13,176	0/1:1,3:4:16.90:97,0,17	./.	./.	0/0:23,0:23:26.57:0,27,254	0/0:6,0:6:3:0,3,29	0/0:17,0:14:24.03:0,24,230	1/1:9,6:6:12.04:140,12,0	0/0:7,0:7:15.02:0,15,145	0/0:13,0:12:27.04:0,27,260	0/0:11,0:10:14.99:0,15,145	0/0:10,0:10:21.03:0,21,202	0/0:16,0:16:30:0,30,288	0/0:8,0:8:11.30:0,11,114	0/0:11,0:11:21.01:0,21,197	0/0:14,0:13:8.81:0,9,87	1/1:12,14:22:30.95:380,31,0	0/0:17,0:16:23.85:0,24,231	0/0:12,0:7:9.01:0,9,87	0/0:10,0:10:18.02:0,18,174	0/0:10,0:8:4.73:0,5,105	0/0:8,0:8:11.90:0,12,110	0/0:9,0:9:12.01:0,12,116	0/0:20,0:20:11.94:0,12,115	0/0:11,0:11:24.03:0,24,231	0/0:12,0:11:24.04:0,24,231	0/0:15,0:11:18.02:0,18,172	0/0:15,0:7:12:0,12,116
chr10	62507284	.	G	GA	5573.26	PASS	AB=0.786;AC=52;AF=0.929;AN=56;BaseQRankSum=-2.985;DP=515;FS=3.506;HRun=13;HaplotypeScore=58.9731;InbreedingCoeff=0.2024;MQ=61.07;MQ0=6;MQRankSum=-1.402;QD=11.06;ReadPosRankSum=1.501;VQSLOD=4.5964;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:9,27:35:37.94:530,38,0	1/1:5,0:7:9.11:49,9,0	0/1:28,0:9:9.25:30,0,9	0/0:11,0:4:4.78:0,5,26	1/1:4,14:18:35.63:317,36,0	1/1:2,12:14:18.02:167,18,0	1/1:4,13:16:21.02:195,21,0	1/1:4,1:18:28.67:155,29,0	1/1:4,0:4:5.91:38,6,0	1/1:9,16:24:21.20:292,21,0	1/1:6,6:12:3.89:160,4,0	1/1:3,14:16:29.66:242,30,0	1/1:8,3:11:8.08:104,8,0	1/1:5,8:13:11.99:106,12,0	1/1:2,13:15:23.77:207,24,0	1/1:3,9:13:20.86:180,21,0	1/1:6,0:29:22.38:110,22,0	1/1:16,15:31:53.44:609,53,0	1/1:6,18:23:33.22:418,33,0	1/1:9,6:15:6.18:183,6,0	1/1:6,10:14:0.11:120,0,0	1/1:0,0:3:8.52:43,9,0	1/1:3,0:13:11.36:58,11,0	1/1:4,3:32:42.85:251,43,0	1/1:4,12:16:21.02:195,21,0	1/1:6,20:25:36.28:310,36,0	1/1:5,15:20:31.01:303,31,0	0/1:7,20:28:25.80:201,0,26
chr10	62507906	.	G	GAGACA	25529.24	PASS	AB=0.690;AC=50;AF=0.893;AN=56;BaseQRankSum=6.879;DP=422;FS=1.971;HRun=0;HaplotypeScore=236.0726;InbreedingCoeff=0.5882;MQ=86.85;MQ0=0;MQRankSum=-9.408;QD=67.54;ReadPosRankSum=5.745;VQSLOD=5.6323;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,13:19:18.64:1093,19,0	1/1:4,4:8:20.71:533,21,0	0/0:28,0:28:70.77:0,71,1341	0/0:16,0:16:42.11:0,42,816	0/1:3,5:8:56.77:172,0,57	1/1:4,9:13:32.66:883,33,0	1/1:8,8:16:48.15:1204,48,0	1/1:15,9:24:66.20:1676,66,0	1/1:6,12:18:37.33:1154,37,0	1/1:9,8:17:44.75:1156,45,0	1/1:3,4:7:18.05:398,18,0	1/1:4,14:18:54.19:1397,54,0	1/1:10,17:27:81.28:2069,81,0	1/1:6,8:14:42.14:1064,42,0	1/1:3,10:13:39.13:961,39,0	1/1:11,20:31:90.30:2306,90,0	1/1:5,7:12:33.11:816,33,0	1/1:11,4:15:42.14:1074,42,0	1/1:7,3:10:30.10:750,30,0	1/1:8,4:12:23.55:685,24,0	0/1:9,4:13:8.07:547,0,8	1/1:5,3:8:19.88:418,20,0	1/1:5,2:7:18.06:413,18,0	1/1:6,7:13:36.09:776,36,0	1/1:3,5:8:2.38:482,2,0	1/1:3,10:13:35.95:917,36,0	1/1:7,18:25:69.24:1848,69,0	1/1:1,8:9:27.09:737,27,0
chr10	62507908	.	GT	G	5150.26	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=8.854;DP=295;FS=0.590;HRun=1;HaplotypeScore=193.7021;InbreedingCoeff=0.7171;MQ=101.31;MQ0=0;MQRankSum=-8.593;QD=20.52;ReadPosRankSum=7.981;VQSLOD=4.4712;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:14:34.87:301,35,0	1/1:6,0:6:13.48:91,13,0	0/0:27,0:28:76.75:0,77,1081	0/0:16,0:16:42.14:0,42,654	1/1:5,0:5:1.27:82,1,0	1/1:10,0:10:26.79:189,27,0	1/1:12,0:12:29.81:235,30,0	1/1:11,0:11:32.91:293,33,0	1/1:12,0:12:35.47:239,35,0	1/1:9,0:9:25.98:203,26,0	1/1:5,0:5:14.91:119,15,0	1/1:15,1:16:43.53:283,44,0	1/1:19,0:19:56.05:386,56,0	1/1:8,0:9:26.77:197,27,0	1/1:12,0:12:35.73:284,36,0	1/1:22,1:24:68.28:473,68,0	1/1:7,0:7:17.94:165,18,0	1/1:6,0:6:11.98:98,12,0	1/1:3,0:3:8.97:70,9,0	1/1:4,0:4:11.78:93,12,0	1/1:5,0:5:5.11:98,5,0	1/1:3,1:5:10.16:64,10,0	1/1:2,0:3:8.95:74,9,0	1/1:9,0:9:7.07:88,7,0	1/1:7,0:7:20.52:165,21,0	1/1:10,2:12:35.62:268,36,0	1/1:18,0:18:53.61:400,54,0	1/1:8,0:8:23.95:194,24,0
chr10	62507909	.	T	TG	2659.52	PASS	AB=0.536;AC=46;AF=0.821;AN=56;BaseQRankSum=6.514;DP=297;FS=3.206;HRun=1;HaplotypeScore=202.6174;InbreedingCoeff=0.4816;MQ=101.05;MQ0=0;MQRankSum=-8.650;QD=10.68;ReadPosRankSum=9.919;VQSLOD=1.1747;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,13:14:28.12:150,28,0	1/1:2,4:6:3.99:51,4,0	0/0:28,0:28:74.05:0,74,913	0/0:16,0:16:42.12:0,42,534	0/1:0,5:5:1.06:1,0,10	1/1:1,9:10:25.83:133,26,0	1/1:5,8:13:24.92:118,25,0	0/1:5,9:14:2.48:132,0,2	1/1:0,12:12:23.37:147,23,0	1/1:0,7:8:22.25:126,22,0	1/1:0,4:4:4.75:37,5,0	1/1:2,14:16:41.61:202,42,0	1/1:2,17:19:32.16:209,32,0	1/1:0,8:9:17.89:106,18,0	1/1:2,10:12:29.60:159,30,0	1/1:2,20:23:62.69:317,63,0	0/1:1,7:8:3.69:29,0,4	1/1:1,4:5:11.75:72,12,0	1/1:2,3:5:8.77:51,9,0	0/1:0,4:4:7.17:20,0,7	0/0:0,4:4:2.56:0,3,14	1/1:1,3:5:11.27:54,11,0	1/1:0,2:3:1.98:19,2,0	1/1:2,7:9:8.55:59,9,0	1/1:1,5:7:12.20:67,12,0	1/1:2,10:12:23.66:156,24,0	1/1:0,18:18:44.23:253,44,0	1/1:0,8:8:23.48:141,23,0
chr10	62507910	.	A	ATTCCAC	33128.55	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=7.707;DP=457;FS=2.039;HRun=0;HaplotypeScore=233.8177;InbreedingCoeff=0.9462;MQ=84.18;MQ0=0;MQRankSum=-10.432;QD=80.41;ReadPosRankSum=6.262;VQSLOD=5.1014;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:21,13:34:87.28:2590,87,0	1/1:7,4:11:30.10:922,30,0	0/0:29,0:29:75.22:0,75,1663	0/0:16,0:16:42.12:0,42,935	1/1:3,5:8:21.07:510,21,0	1/1:6,9:15:45.15:1400,45,0	1/1:16,8:24:65.93:1768,66,0	1/1:20,9:29:78.70:2262,79,0	1/1:4,12:16:48.16:1467,48,0	1/1:5,7:12:36.12:1095,36,0	1/1:1,4:5:12.04:375,12,0	1/1:8,14:22:66.23:1986,66,0	1/1:2,17:19:35:1539,35,0	1/1:5,8:14:36.12:1069,36,0	1/1:9,10:19:50.01:1500,50,0	1/1:8,20:29:87.28:2587,87,0	1/1:5,7:12:27.08:766,27,0	1/1:6,4:10:21.07:601,21,0	1/1:9,3:12:33.06:796,33,0	1/1:2,4:6:18.06:525,18,0	1/1:13,4:17:45.15:1328,45,0	1/1:7,3:11:30.10:896,30,0	1/1:7,2:10:30.10:867,30,0	1/1:6,7:13:9:641,9,0	1/1:6,5:12:33.11:955,33,0	1/1:9,10:19:54.18:1648,54,0	1/1:5,18:23:69.24:2085,69,0	1/1:2,8:10:30.10:952,30,0
chr10	62508277	.	A	AGTGTGT	1390.35	PASS	AB=0.991;AC=24;AF=0.522;AN=46;BaseQRankSum=-1.910;DP=663;FS=20.553;HRun=0;HaplotypeScore=178.2795;InbreedingCoeff=0.0245;MQ=64.01;MQ0=13;MQRankSum=-2.548;QD=3.54;ReadPosRankSum=-2.348;VQSLOD=1.1781;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	1/1:10,0:10:3.01:39,3,0	./.	0/0:48,0:25:3.01:0,3,41	./.	0/1:19,0:18:7.78:8,0,18	0/1:37,0:38:99:110,0,177	1/1:25,0:23:8.11:63,8,0	0/0:27,0:27:8.73:0,9,91	0/1:20,0:19:42.01:60,0,42	./.	0/1:33,0:35:7.44:7,0,294	0/1:22,0:21:74.61:75,0,142	0/0:32,0:32:8.75:0,9,71	0/1:28,0:29:12.59:13,0,13	1/1:34,6:40:28.01:790,28,0	0/0:22,0:22:8.30:0,8,47	0/1:25,0:26:93.89:94,0,116	0/1:24,0:22:2.41:2,0,9	1/1:12,0:12:8.47:77,8,0	1/1:34,0:34:1.74:57,2,0	0/1:11,0:11:1.34:1,0,90	./.	0/0:35,0:36:24.60:0,25,597	0/0:13,0:14:8.51:0,9,109	0/1:24,0:24:48.03:48,0,67	1/1:14,0:15:3.87:70,4,0	1/1:8,0:8:2.99:23,3,0
chr10	62508315	.	TCAAAGA	T	3757.19	PASS	AB=0.877;AC=45;AF=0.865;AN=52;BaseQRankSum=-1.811;DP=567;FS=42.552;HRun=0;HaplotypeScore=147.5834;InbreedingCoeff=0.1740;MQ=39.96;MQ0=32;MQRankSum=-0.036;QD=7.75;ReadPosRankSum=3.146;VQSLOD=1.4423;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:23,1:24:0:0,0,0	1/1:10,0:10:3:37,3,0	./.	0/0:39,0:1:3.01:0,3,41	./.	1/1:19,2:21:3.43:175,3,0	1/1:30,0:31:19.63:169,20,0	1/1:25,0:22:20.51:99,21,0	1/1:18,0:19:10.76:75,11,0	1/1:19,0:19:29.74:248,30,0	1/1:2,5:7:3.01:67,3,0	1/1:27,0:28:45.43:406,45,0	1/1:18,1:18:34.67:251,35,0	1/1:27,2:29:21.81:149,22,0	1/1:24,0:24:17.69:156,18,0	1/1:29,0:31:48.41:556,48,0	1/1:21,0:20:16.60:104,17,0	1/1:15,0:15:7.86:226,8,0	0/1:3,0:9:13.59:141,0,14	1/1:13,0:15:17.59:183,18,0	1/1:26,0:24:5.61:56,6,0	0/1:15,1:17:29.26:35,0,29	0/1:11,0:11:0:0,0,0	0/1:27,0:28:47.49:47,0,108	1/1:19,0:19:11.40:124,11,0	1/1:14,1:14:23.22:237,23,0	1/1:17,0:17:22.70:195,23,0	1/1:3,0:3:2.54:22,3,0
chr10	62508316	.	CAAAG	C	4823.24	PASS	AB=0.784;AC=46;AF=0.920;AN=50;BaseQRankSum=-4.316;DP=554;FS=6.001;HRun=0;HaplotypeScore=137.3447;InbreedingCoeff=0.2802;MQ=39.91;MQ0=31;MQRankSum=1.074;QD=10.39;ReadPosRankSum=1.334;VQSLOD=4.1269;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:6,0:24:0:0,0,0	1/1:1,0:10:2.80:18,3,0	./.	./.	./.	1/1:8,11:21:21.72:225,22,0	1/1:22,3:28:23.34:153,23,0	1/1:24,0:21:59.40:406,59,0	1/1:15,0:19:12.23:73,12,0	1/1:18,1:19:49.42:424,49,0	1/1:5,1:6:3.01:45,3,0	1/1:24,4:28:45.40:437,45,0	1/1:17,1:18:20.18:149,20,0	1/1:8,20:29:16.09:199,16,0	1/1:10,14:24:17.10:217,17,0	1/1:25,5:31:48.72:471,49,0	1/1:7,0:20:12.23:71,12,0	1/1:9,1:13:38.73:349,39,0	1/1:7,0:7:11.65:133,12,0	1/1:13,1:16:20.77:286,21,0	1/1:6,18:23:5.87:80,6,0	1/1:17,0:17:12.75:62,13,0	0/0:1,0:11:0:0,0,0	1/1:26,1:27:39.02:320,39,0	1/1:14,4:19:14.97:145,15,0	1/1:15,0:14:38.35:280,38,0	1/1:14,2:17:35.55:266,36,0	0/1:4,0:4:9.91:13,0,10
chr10	62510364	.	GCACA	G	14315.51	PASS	AB=0.816;AC=40;AF=0.714;AN=56;BaseQRankSum=-7.245;DP=835;FS=14.904;HRun=0;HaplotypeScore=170.6094;InbreedingCoeff=0.7877;MQ=64.70;MQ0=10;MQRankSum=1.541;QD=23.86;ReadPosRankSum=4.123;VQSLOD=3.8946;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:46:69.86:0,70,1231	0/0:7,0:13:21.05:0,21,312	0/0:49,0:34:23.98:0,24,333	0/0:51,0:22:15.04:0,15,197	0/0:6,0:16:14.86:0,15,283	1/1:3,10:15:15.04:223,15,0	1/1:19,31:50:49.45:1136,49,0	0/0:20,0:23:44.59:0,45,698	0/1:28,0:27:75.12:287,0,75	1/1:13,18:30:44.10:684,44,0	1/1:6,9:15:18.05:271,18,0	1/1:14,25:40:79.11:1373,79,0	1/1:9,16:26:45.15:711,45,0	1/1:4,21:25:42.14:662,42,0	1/1:4,26:34:75.23:1145,75,0	1/1:8,24:32:38.92:754,39,0	0/0:14,0:37:47.87:0,48,748	1/1:6,24:30:37.36:813,37,0	1/1:7,7:13:1.71:225,2,0	1/1:4,10:13:24.08:390,24,0	1/1:28,54:79:99:1894,110,0	1/1:6,12:19:23.51:511,24,0	1/1:6,12:18:18.40:284,18,0	1/1:15,38:53:96.16:1516,96,0	1/1:7,14:22:30.10:467,30,0	1/1:17,12:30:40.65:649,41,0	0/1:5,6:12:1.30:272,0,1	1/1:5,1:6:3.01:49,3,0
chr10	62510390	.	ACACT	A	6827.13	PASS	AB=0.992;AC=22;AF=0.393;AN=56;BaseQRankSum=11.829;DP=979;FS=0.945;HRun=0;HaplotypeScore=217.8471;InbreedingCoeff=-0.4971;MQ=50.43;MQ0=35;MQRankSum=-0.512;QD=10.31;ReadPosRankSum=13.499;VQSLOD=1.9239;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:50.23:0,50,1499	0/0:13,0:13:20.99:0,21,333	0/0:77,0:14:26.12:0,26,389	0/0:90,0:19:17:0,17,336	0/0:16,0:16:23.86:0,24,385	0/1:20,0:20:87.59:88,0,115	0/1:55,1:56:99:512,0,217	0/0:33,0:36:37.11:0,37,1011	1/1:17,10:26:36.23:612,36,0	0/1:28,1:27:83.67:340,0,84	0/1:17,0:16:65.72:102,0,66	0/1:44,0:44:22.52:622,0,23	0/1:33,0:33:99:330,0,128	0/1:35,0:34:79.29:281,0,79	0/1:38,0:38:36.14:487,0,36	0/1:36,2:37:99:405,0,109	0/0:37,0:37:77.79:0,78,1083	0/1:32,0:32:67.94:372,0,68	0/1:17,0:16:64.49:64,0,90	0/1:15,0:14:62.80:166,0,63	0/1:100,0:96:99:816,0,496	0/1:23,0:22:99:220,0,128	0/1:18,1:19:47.95:167,0,48	0/1:57,0:55:99:630,0,148	0/1:23,0:23:72.33:180,0,72	0/1:19,0:18:31.10:295,0,31	0/1:17,0:17:94.84:122,0,95	0/1:3,0:3:15.84:16,0,40
chr10	62510407	.	TCACACACAACA	T	643.09	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.143;DP=1041;FS=18.390;HRun=0;HaplotypeScore=355.9706;InbreedingCoeff=0.9635;MQ=49.61;MQ0=37;MQRankSum=-4.206;QD=23.82;ReadPosRankSum=0.817;VQSLOD=0.9616;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,100,3742	0/0:10,0:10:26.76:0,27,885	0/0:86,0:15:22.26:0,22,449	0/0:107,0:25:36.59:0,37,951	0/0:14,0:14:29.84:0,30,1041	0/0:26,0:26:63.08:0,63,2378	0/0:53,0:53:99:0,111,3707	0/0:40,0:38:63.21:0,63,2042	1/1:11,16:25:26.99:737,27,0	0/0:29,0:28:42.14:0,42,1676	0/0:16,0:15:36.04:0,36,1285	0/0:42,0:42:80.68:0,81,2442	0/0:34,0:34:83.86:0,84,3086	0/0:37,0:37:80.82:0,81,2666	0/0:42,0:42:89.75:0,90,3208	0/0:38,0:37:74.71:0,75,2656	0/0:37,0:37:78.27:0,78,3508	0/0:36,0:36:83.46:0,83,3255	0/0:23,0:20:36.12:0,36,1192	0/0:18,0:17:36.07:0,36,1481	0/0:111,0:109:99:0,228,9601	0/0:24,0:23:51.18:0,51,1942	0/0:16,0:16:28.03:0,28,967	0/0:61,0:60:99:0,141,5133	0/0:23,0:23:60.12:0,60,2213	0/0:23,0:22:57.20:0,57,2162	0/0:18,0:18:37.61:0,38,1504	0/0:4,0:4:12.04:0,12,557
chr10	62510565	.	CACAG	C	495.91	PASS	AB=0.983;AC=4;AF=0.071;AN=56;BaseQRankSum=-3.101;DP=878;FS=9.441;HRun=0;HaplotypeScore=210.6970;InbreedingCoeff=0.3428;MQ=41.50;MQ0=39;MQRankSum=-0.351;QD=3.33;ReadPosRankSum=-2.074;VQSLOD=1.1475;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:17.92:0,18,328	0/0:4,0:4:1.41:0,1,3	0/0:91,0:7:7.28:0,7,230	0/0:98,0:15:7.25:0,7,329	0/0:23,0:22:17.82:0,18,305	0/0:17,0:17:21.79:0,22,204	0/0:34,0:34:42.76:0,43,562	0/1:28,1:28:4.87:410,0,5	0/0:25,0:25:25.83:0,26,273	0/0:32,0:32:35.42:0,35,1337	0/0:11,0:11:11.87:0,12,94	0/0:34,0:34:44.31:0,44,365	0/0:28,0:26:45:0,45,703	0/0:34,0:34:34.58:0,35,532	0/0:25,0:25:37.95:0,38,417	0/0:31,0:31:38.79:0,39,407	1/1:35,3:37:2.53:174,3,0	0/0:31,0:31:41.02:0,41,998	0/0:18,0:17:3.01:0,3,446	0/0:10,0:10:15.63:0,16,122	0/1:82,0:80:10.26:10,0,748	0/0:25,0:25:23.55:0,24,219	0/0:24,0:24:17.79:0,18,227	0/0:40,0:39:14.45:0,14,536	0/0:20,0:20:32.69:0,33,337	0/0:26,0:26:36.94:0,37,1062	0/0:18,0:18:30.20:0,30,390	0/0:6,0:5:15.05:0,15,244
chr10	62510567	.	CAG	C	2209.65	PASS	AB=0.999;AC=14;AF=0.250;AN=56;BaseQRankSum=-2.780;DP=869;FS=13.414;HRun=0;HaplotypeScore=192.0641;InbreedingCoeff=0.1786;MQ=41.95;MQ0=37;MQRankSum=1.701;QD=5.03;ReadPosRankSum=0.919;VQSLOD=2.2275;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:7.73:0,8,191	1/1:0,4:4:9.03:137,9,0	0/1:85,1:8:41.77:42,0,126	0/1:96,0:15:22.81:23,0,171	0/1:22,0:21:27.40:27,0,164	0/0:17,0:17:17.44:0,17,111	0/0:35,0:35:16.15:0,16,383	1/1:24,7:30:62.69:860,63,0	0/0:24,0:24:24.77:0,25,180	0/0:34,0:34:2.37:0,2,767	0/0:12,0:12:14.24:0,14,94	0/0:32,0:32:6.23:0,6,174	0/0:28,0:26:6.97:0,7,329	0/0:34,0:34:25.55:0,26,310	0/0:24,0:24:32:0,32,248	0/0:32,0:32:38.48:0,38,318	1/1:6,32:37:81.13:1133,81,0	0/1:31,0:31:9.60:10,0,568	0/1:19,0:18:78.10:78,0,311	0/1:10,0:10:7.47:7,0,50	0/1:80,0:79:52.31:52,0,533	0/0:25,0:25:22.04:0,22,166	0/1:22,0:22:5.74:6,0,130	0/0:38,0:37:15.77:0,16,348	0/0:20,0:20:30.22:0,30,206	0/0:25,0:25:5.45:0,5,558	0/0:19,0:19:27.92:0,28,221	0/0:6,0:5:13.95:0,14,109
chr10	62510569	.	G	GACTTACACACAC	5701.40	PASS	AB=0.744;AC=25;AF=0.446;AN=56;BaseQRankSum=4.542;DP=929;FS=14.479;HRun=0;HaplotypeScore=278.6947;InbreedingCoeff=-0.6553;MQ=43.24;MQ0=36;MQRankSum=-5.331;QD=6.72;ReadPosRankSum=2.309;VQSLOD=2.0065;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:9,1:36:99:329,0,109	0/0:4,0:4:9.03:0,9,229	0/1:81,0:8:5.57:6,0,237	0/1:91,0:16:5.93:6,0,372	0/1:22,0:21:49.96:50,0,133	0/1:7,0:20:68.47:68,0,71	0/1:24,0:40:36:36,0,477	0/1:32,0:31:99:188,0,844	0/1:6,0:34:73.77:335,0,74	0/1:15,0:42:99:878,0,402	0/0:6,0:14:9.50:0,10,138	0/1:10,0:40:33.77:166,0,34	0/1:6,0:28:83.06:721,0,83	0/1:18,0:40:99:307,0,197	0/1:8,0:26:71.15:185,0,71	0/1:18,0:37:99:132,0,268	0/0:39,0:38:82.51:0,83,1873	0/1:27,0:30:99:586,0,411	0/1:21,0:20:99:181,0,361	0/1:8,0:10:11.44:11,0,81	0/1:72,0:77:99:178,0,495	0/0:10,0:23:8.68:0,9,127	0/1:16,0:22:56.17:56,0,113	0/1:28,0:36:53.83:54,0,389	0/1:8,0:20:49.15:49,0,211	0/1:10,0:31:99:679,0,265	0/1:5,0:22:65.40:249,0,65	1/1:3,0:5:15.01:251,15,0
chr10	62512091	.	C	CGCAT	1574.73	PASS	AB=0.839;AC=5;AF=0.089;AN=56;BaseQRankSum=3.373;DP=978;FS=0.000;HRun=0;HaplotypeScore=193.3609;InbreedingCoeff=0.7716;MQ=55.14;MQ0=10;MQRankSum=-0.699;QD=25.82;ReadPosRankSum=-3.661;VQSLOD=2.7572;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:40:99:0,105,1552	1/1:4,9:14:14.99:304,15,0	0/0:47,0:21:49.33:0,49,789	0/0:28,0:16:44.96:0,45,665	0/0:31,0:31:75.14:0,75,1264	0/0:23,0:23:67.95:0,68,1153	0/0:44,0:44:99:0,126,1887	1/1:2,16:21:55.20:685,55,0	0/0:42,0:42:63.91:0,64,1153	0/0:37,0:37:99:0,108,1588	0/0:19,0:19:51.11:0,51,896	0/0:41,0:41:99:0,116,1954	0/0:32,0:32:96.18:0,96,1632	0/0:48,0:48:99:0,144,2433	0/0:42,0:42:99:0,120,1972	0/0:46,0:46:99:0,135,2343	0/1:21,5:26:40.20:712,0,40	0/0:48,0:48:99:0,112,2074	0/0:27,0:23:66.09:0,66,993	0/0:18,0:17:44.98:0,45,630	0/0:110,0:109:99:0,306,4248	0/0:31,0:31:78.06:0,78,1214	0/0:12,0:12:23.93:0,24,371	0/0:61,0:61:99:0,168,2549	0/0:20,0:20:35.58:0,36,514	0/0:36,0:36:99:0,105,1650	0/0:18,0:18:50.94:0,51,775	0/0:15,0:15:45.09:0,45,777
chr10	62512122	.	T	TCA	881.43	PASS	AB=0.658;AC=1;AF=0.018;AN=56;BaseQRankSum=7.494;DP=1025;FS=14.482;HRun=0;HaplotypeScore=162.2193;InbreedingCoeff=-0.0188;MQ=53.71;MQ0=27;MQRankSum=-2.461;QD=17.63;ReadPosRankSum=-0.862;VQSLOD=3.0090;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:42:99:0,105,1382	0/0:9,0:9:16.81:0,17,169	0/0:41,0:12:27.06:0,27,315	0/0:48,0:19:55.97:0,56,606	0/0:25,0:24:54.18:0,54,717	0/0:23,0:23:46.89:0,47,745	0/0:45,0:45:99:0,114,1456	0/0:36,0:33:84.25:0,84,1087	0/1:24,26:49:99:956,0,212	0/0:46,0:46:99:0,117,1549	0/0:17,0:17:36.11:0,36,464	0/0:37,0:37:99:0,99,1316	0/0:34,0:34:90.27:0,90,1164	0/0:41,0:41:99:0,117,1525	0/0:43,0:43:99:0,117,1524	0/0:41,0:41:99:0,117,1527	0/0:26,0:26:65.84:0,66,876	0/0:48,0:48:99:0,133,1737	0/0:20,0:18:33.11:0,33,436	0/0:18,0:18:42.14:0,42,558	0/0:145,0:143:99:0,387,5048	0/0:25,0:25:57.17:0,57,732	0/0:14,0:14:24.08:0,24,319	0/0:71,0:71:99:0,186,2444	0/0:21,0:21:45.15:0,45,598	0/0:37,0:37:99:0,108,1438	0/0:13,0:13:33.11:0,33,440	0/0:8,0:8:24.08:0,24,319
chr10	62512155	.	C	CAT	641.25	PASS	AB=0.686;AC=1;AF=0.018;AN=56;BaseQRankSum=7.208;DP=1056;FS=9.930;HRun=0;HaplotypeScore=175.2914;InbreedingCoeff=-0.0190;MQ=54.43;MQ0=10;MQRankSum=-6.083;QD=10.87;ReadPosRankSum=0.578;VQSLOD=2.9867;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,141,2132	0/0:7,0:7:13.59:0,14,173	0/0:42,0:12:29.97:0,30,348	0/0:56,0:29:50.76:0,51,959	0/0:25,0:23:48.11:0,48,664	0/0:21,0:21:51.14:0,51,842	0/0:44,0:44:99:0,117,1745	0/0:26,0:25:66.21:0,66,959	0/1:32,27:58:99:716,0,598	0/0:44,0:43:99:0,126,1905	0/0:18,0:18:51.17:0,51,766	0/0:30,0:30:90.29:0,90,1349	0/0:36,0:36:99:0,108,1625	0/0:41,0:41:99:0,117,1746	0/0:39,0:39:99:0,114,1634	0/0:45,0:45:99:0,132,1975	0/0:30,0:30:87.19:0,87,1217	0/0:41,0:41:99:0,123,1852	0/0:30,0:26:75.19:0,75,1061	0/0:18,0:18:48.16:0,48,733	0/0:155,0:155:99:0,418,6285	0/0:22,0:22:51.06:0,51,755	0/0:17,0:17:35.77:0,36,504	0/0:76,0:76:99:0,220,3276	0/0:22,0:22:57.19:0,57,872	0/0:35,0:35:99:0,105,1568	0/0:12,0:12:36.12:0,36,552	0/0:14,0:14:33.02:0,33,413
chr10	62512162	.	G	GCA	2762	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-0.107;DP=1046;FS=18.320;HRun=0;HaplotypeScore=173.8098;InbreedingCoeff=0.9899;MQ=54.55;MQ0=8;MQRankSum=-3.197;QD=22.64;ReadPosRankSum=-2.036;VQSLOD=2.6744;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,143,1825	1/1:3,3:6:12.04:207,12,0	0/0:41,0:13:26.54:0,27,230	0/0:57,0:30:47.41:0,47,623	0/0:20,0:18:33.09:0,33,413	0/0:23,0:23:51.28:0,51,739	0/0:43,0:43:99:0,111,1398	1/1:4,23:27:66.18:1031,66,0	1/1:61,0:60:22.36:331,22,0	0/0:42,0:42:99:0,108,1432	0/0:19,0:19:48.11:0,48,603	0/0:30,0:30:74.96:0,75,919	0/0:34,0:34:93.29:0,93,1221	0/0:39,0:39:99:0,105,1327	0/0:37,0:37:99:0,102,1342	0/0:44,0:44:99:0,117,1524	1/1:4,24:28:78.21:1350,78,0	0/0:41,0:41:92.82:0,93,1214	0/0:31,0:28:66.07:0,66,837	0/0:17,0:17:48.16:0,48,638	0/0:152,0:152:99:0,394,5099	0/0:21,0:21:45.02:0,45,567	0/0:15,0:15:30.09:0,30,385	0/0:75,0:75:99:0,214,2751	0/0:22,0:22:51.11:0,51,643	0/0:35,0:35:96.29:0,96,1235	0/0:15,0:15:39.05:0,39,483	0/0:16,0:16:42.08:0,42,538
chr10	62512243	.	T	TACAC	1968.85	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=-2.564;DP=904;FS=7.666;HRun=0;HaplotypeScore=169.0492;InbreedingCoeff=0.7655;MQ=55.50;MQ0=14;MQRankSum=-1.514;QD=14.27;ReadPosRankSum=-3.533;VQSLOD=2.1934;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:45:63.28:0,63,1233	1/1:1,3:4:6.02:147,6,0	0/1:50,0:20:4.13:4,0,154	0/0:42,0:21:19.99:0,20,292	0/0:18,0:19:26.44:0,26,530	0/0:22,0:24:32.30:0,32,446	0/0:40,0:41:87.66:0,88,1260	1/1:41,8:46:56.96:947,57,0	0/0:32,0:30:48.15:0,48,760	0/0:28,0:28:61.73:0,62,919	0/0:17,0:17:27.09:0,27,439	0/0:39,0:41:86.10:0,86,1395	0/0:28,0:29:39.24:0,39,885	0/0:44,0:47:99:0,105,1625	0/0:29,0:30:67.28:0,67,1092	0/0:48,0:48:99:0,105,1691	1/1:11,19:35:49.96:1007,50,0	0/0:37,0:40:87.20:0,87,1294	0/0:19,0:21:42.09:0,42,526	0/0:12,0:12:36.08:0,36,541	0/0:92,0:94:99:0,157,2462	0/0:18,0:18:19.16:0,19,590	0/0:13,0:12:24.08:0,24,380	0/0:47,0:47:90.23:0,90,1354	0/0:18,0:18:51.17:0,51,841	0/0:30,0:30:48.83:0,49,999	0/0:11,0:12:0.16:0,0,273	0/0:16,0:16:30.08:0,30,460
chr10	62512484	.	T	TCCC	84.36	PASS	AC=2;AF=0.037;AN=54;BaseQRankSum=-1.258;DP=426;FS=6.859;HRun=2;HaplotypeScore=60.4405;InbreedingCoeff=0.5753;MQ=39.51;MQ0=90;MQRankSum=-2.142;QD=9.37;ReadPosRankSum=-1.058;VQSLOD=-0.6390;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:17:39.10:0,39,545	0/0:7,0:5:6.02:0,6,95	0/0:37,0:4:8.98:0,9,114	0/0:40,0:5:4.56:0,5,37	0/0:16,0:14:27.09:0,27,394	0/0:14,0:14:27.09:0,27,422	0/0:15,0:13:30.05:0,30,415	0/0:17,0:13:30.09:0,30,401	1/1:2,6:8:9.03:167,9,0	0/0:12,0:12:30.09:0,30,410	0/0:7,0:4:9.03:0,9,144	0/0:11,0:9:15.05:0,15,228	0/0:6,0:6:9.03:0,9,147	0/0:8,0:8:15.52:0,16,244	0/0:9,0:8:24.08:0,24,338	0/0:11,0:10:24.08:0,24,384	0/0:21,0:14:21.07:0,21,309	0/0:21,0:20:42.14:0,42,671	0/0:19,0:14:30.10:0,30,474	0/0:17,0:15:36.12:0,36,563	./.	0/0:5,0:5:9.03:0,9,146	0/0:10,0:9:18.04:0,18,236	0/0:13,0:12:24.08:0,24,364	0/0:13,0:11:12.03:0,12,181	0/0:11,0:9:21.07:0,21,330	0/0:23,0:18:29.89:0,30,458	0/0:28,0:15:21.06:0,21,309
chr10	62512521	.	CT	C	1052.26	PASS	AC=6;AF=0.111;AN=54;BaseQRankSum=4.111;DP=403;FS=0.682;HRun=2;HaplotypeScore=37.4588;InbreedingCoeff=0.9040;MQ=51.22;MQ0=25;MQRankSum=-0.709;QD=26.31;ReadPosRankSum=-0.707;VQSLOD=2.9027;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,1:21:63.21:0,63,943	1/1:0,3:3:6.02:78,6,0	0/0:33,0:6:8.99:0,9,102	./.	0/0:13,0:13:39.13:0,39,584	0/0:11,0:11:24.08:0,24,360	0/0:24,0:23:66.22:0,66,972	1/1:4,11:14:27.04:330,27,0	0/0:12,0:12:27.08:0,27,380	0/0:18,0:18:51.17:0,51,763	0/0:6,0:6:12.02:0,12,158	0/0:10,0:10:30.10:0,30,448	0/0:10,0:10:30.10:0,30,449	0/0:13,0:13:39.12:0,39,563	0/0:13,0:12:33.11:0,33,495	0/0:15,0:14:42.14:0,42,630	1/1:0,22:20:60.20:779,60,0	0/0:15,1:16:9.31:0,9,635	0/0:16,0:16:48.14:0,48,665	0/0:11,0:11:33.08:0,33,470	0/0:8,0:8:24.08:0,24,359	0/0:6,0:6:18.05:0,18,250	0/0:8,0:8:24.08:0,24,358	0/0:24,0:24:69.22:0,69,1015	0/0:7,0:7:21.07:0,21,315	0/0:14,0:14:42.14:0,42,629	0/0:14,0:14:42.14:0,42,629	0/0:12,0:12:26.45:0,26,368
chr10	62513932	.	GT	G	3141.90	PASS	AB=0.675;AC=48;AF=0.857;AN=56;BaseQRankSum=-2.089;DP=630;FS=5.282;HRun=17;HaplotypeScore=117.1997;InbreedingCoeff=0.3115;MQ=69.25;MQ0=9;MQRankSum=0.463;QD=6.02;ReadPosRankSum=4.612;VQSLOD=2.6279;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:16,12:31:7.82:131,8,0	1/1:4,0:8:12.79:45,13,0	0/0:48,0:23:25.61:0,26,134	0/0:59,0:21:4.61:0,5,30	1/1:14,9:23:10.43:134,10,0	1/1:12,10:19:26.32:140,26,0	1/1:7,14:22:42.68:233,43,0	0/1:31,1:39:9.39:78,0,9	1/1:11,7:18:12.74:124,13,0	1/1:10,13:22:31.85:170,32,0	1/1:16,18:34:30.22:252,30,0	1/1:14,5:19:28.10:130,28,0	1/1:2,3:5:11.57:63,12,0	1/1:5,5:10:8.37:84,8,0	0/1:12,16:28:15.36:161,0,15	1/1:6,13:19:45.60:249,46,0	1/1:16,0:14:9.41:31,9,0	1/1:8,12:18:15.63:173,16,0	1/1:18,8:28:10.06:130,10,0	0/1:6,10:17:24.66:98,0,25	0/1:8,12:20:0.50:125,0,1	1/1:9,1:19:34.87:116,35,0	1/1:7,1:14:18.34:54,18,0	1/1:8,0:13:7.12:20,7,0	1/1:5,8:14:24.11:123,24,0	1/1:7,14:23:34.45:222,34,0	1/1:16,8:23:6.65:120,7,0	1/1:4,7:12:6.75:76,7,0
chr10	62513944	.	T	TG	101.79	PASS	AB=0.915;AC=7;AF=0.125;AN=56;BaseQRankSum=2.017;DP=630;FS=2.213;HRun=0;HaplotypeScore=135.5322;InbreedingCoeff=0.0743;MQ=54.60;MQ0=16;MQRankSum=-2.614;QD=0.89;ReadPosRankSum=0.254;VQSLOD=2.6500;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:59.46:0,59,482	0/1:9,1:10:7.88:8,0,60	0/0:44,0:15:22.89:0,23,161	0/0:51,0:10:12:0,12,104	0/0:29,0:27:67.92:0,68,512	0/0:21,2:20:45.14:0,45,342	0/0:20,0:20:52.35:0,52,374	0/1:35,5:40:85.21:85,0,334	0/1:15,2:17:2.47:2,0,165	0/0:22,0:21:53.20:0,53,365	0/0:29,0:28:71.51:0,72,557	0/0:14,2:16:36.16:0,36,269	0/0:6,0:6:14.86:0,15,109	0/0:12,0:12:26.82:0,27,217	0/0:28,0:28:66.12:0,66,550	0/0:22,0:21:61.50:0,62,425	1/1:11,5:14:1.04:90,1,0	0/0:22,0:20:50.50:0,51,381	0/0:26,0:25:65.90:0,66,478	0/0:21,0:21:50.54:0,51,417	0/0:18,0:17:40.91:0,41,326	0/0:22,3:24:14.37:0,14,190	0/1:16,0:16:14.73:15,0,54	0/1:13,2:15:16.14:16,0,47	0/0:12,1:13:7.69:0,8,172	0/0:25,0:25:50.24:0,50,496	0/0:21,0:19:49.32:0,49,370	0/0:14,0:14:30.38:0,30,252
chr10	62513947	.	T	TG	2297.19	PASS	AB=0.998;AC=34;AF=0.607;AN=56;BaseQRankSum=-4.757;DP=611;FS=17.157;HRun=0;HaplotypeScore=127.2945;InbreedingCoeff=-0.0118;MQ=53.60;MQ0=17;MQRankSum=2.629;QD=4.88;ReadPosRankSum=-0.445;VQSLOD=2.1419;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:35.39:0,35,343	0/1:10,0:10:17.73:22,0,18	0/0:38,0:13:26:0,26,157	0/0:44,0:8:11.42:0,11,83	0/0:30,1:29:38.75:0,39,381	1/1:21,0:18:35.25:173,35,0	1/1:20,0:20:31.69:213,32,0	0/1:37,1:38:99:107,0,192	1/1:15,1:16:22.98:136,23,0	1/1:21,0:20:13.42:174,13,0	0/1:26,0:25:8.24:133,0,8	0/1:15,0:15:27.85:28,0,44	0/1:7,0:7:18.23:21,0,18	0/1:13,0:13:13.49:61,0,13	0/1:30,0:29:12.32:117,0,12	0/1:25,0:24:4.96:129,0,5	0/1:16,0:14:13.98:60,0,14	0/1:22,0:20:7.71:74,0,8	1/1:24,0:23:12.62:172,13,0	0/1:21,0:21:63.22:74,0,63	0/1:18,0:17:0.26:96,0,0	0/1:24,0:23:26.26:27,0,26	0/1:16,0:16:5.61:41,0,6	1/1:14,1:14:4.86:39,5,0	1/1:14,0:14:18.67:145,19,0	1/1:26,0:25:5.05:176,5,0	1/1:18,0:16:12.15:114,12,0	1/1:15,0:14:17.51:141,18,0
chr10	62513958	.	TG	T	1380.28	PASS	AB=0.986;AC=12;AF=0.214;AN=56;BaseQRankSum=5.044;DP=583;FS=5.741;HRun=1;HaplotypeScore=124.6099;InbreedingCoeff=0.6056;MQ=54.50;MQ0=20;MQRankSum=-6.592;QD=7.84;ReadPosRankSum=-1.078;VQSLOD=0.4178;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:43.27:0,43,466	1/1:5,7:12:11.83:80,12,0	0/0:27,0:11:8.23:0,8,73	0/1:29,1:7:1.69:2,0,39	0/0:30,0:28:16.82:0,17,458	0/0:20,0:16:30.05:0,30,338	0/0:18,0:18:50.52:0,51,486	0/1:36,1:37:39.61:265,0,40	0/1:15,0:15:2.56:36,0,3	0/0:18,0:19:41.43:0,41,440	0/0:22,0:21:53.90:0,54,497	0/0:16,0:16:12.31:0,12,221	0/0:6,1:7:6.09:0,6,57	0/0:11,0:11:21.66:0,22,204	0/0:32,1:32:3.96:0,4,630	0/0:25,1:25:59.76:0,60,652	0/1:15,0:13:7.30:52,0,7	0/0:20,1:20:16.02:0,16,351	0/0:19,0:18:30.37:0,30,345	0/0:21,0:21:24.62:0,25,359	0/0:18,0:15:37.21:0,37,315	1/1:12,16:27:48.13:535,48,0	1/1:6,13:19:25.10:320,25,0	1/1:13,5:17:32.48:259,32,0	0/0:11,0:11:32.58:0,33,320	0/0:28,0:27:56.34:0,56,594	0/0:16,1:15:17.65:0,18,304	0/0:18,0:17:43.26:0,43,429
chr10	62513959	.	GT	G	398.35	PASS	AB=0.963;AC=7;AF=0.125;AN=56;BaseQRankSum=3.950;DP=589;FS=1.195;HRun=12;HaplotypeScore=131.6876;InbreedingCoeff=0.2569;MQ=54.45;MQ0=20;MQRankSum=-3.498;QD=3.29;ReadPosRankSum=-0.439;VQSLOD=1.0977;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:25:43.44:0,43,366	0/0:12,0:12:2.69:0,3,47	0/0:24,1:11:8.95:0,9,74	0/1:29,2:7:2.98:3,0,25	0/0:29,0:27:47.04:0,47,442	0/0:19,1:16:9.96:0,10,268	0/0:17,0:18:32.24:0,32,314	0/0:36,0:37:23.44:0,23,183	1/1:3,9:15:41.73:307,42,0	0/0:17,1:18:14.03:0,14,301	0/0:24,0:23:37.17:0,37,335	0/0:17,0:17:34.26:0,34,280	0/1:6,1:7:4.94:5,0,53	0/0:11,0:11:20.99:0,21,193	0/0:32,0:32:48.48:0,48,593	0/0:25,1:25:43.39:0,43,573	0/0:16,0:14:9.51:0,10,61	0/0:19,0:18:18.03:0,18,321	0/0:20,1:20:13.71:0,14,260	0/0:21,1:22:14.47:0,14,287	0/0:17,0:15:28.59:0,29,224	0/1:29,0:29:58.48:104,0,58	0/1:19,0:20:0.99:88,0,1	0/1:17,0:17:17:17,0,27	0/0:10,0:11:26.31:0,26,224	0/0:26,1:27:54.54:0,55,489	0/0:17,0:16:27.67:0,28,253	0/0:18,1:18:3.16:0,3,331
chr10	62515046	.	A	AGGT	1118.15	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.417;DP=631;FS=3.423;HRun=0;HaplotypeScore=86.5361;InbreedingCoeff=0.9352;MQ=81.14;MQ0=0;MQRankSum=-1.447;QD=58.85;ReadPosRankSum=0.531;VQSLOD=5.2958;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:93.32:0,93,1725	0/0:7,0:7:21.07:0,21,392	0/0:14,0:14:36.08:0,36,585	0/0:19,0:19:52.79:0,53,914	0/0:19,0:19:57.20:0,57,1060	0/0:19,0:19:57.20:0,57,1063	0/0:30,0:30:90.29:0,90,1631	0/0:26,0:26:78.26:0,78,1422	1/1:0,18:19:51.18:1213,51,0	0/0:21,0:21:63.22:0,63,1172	0/0:7,0:7:21.07:0,21,392	0/0:29,0:29:84.27:0,84,1534	0/0:22,0:22:63.22:0,63,1169	0/0:26,0:26:75.26:0,75,1398	0/0:36,0:36:99:0,108,2008	0/0:28,0:28:84.27:0,84,1506	0/0:40,0:40:99:0,120,2237	0/0:35,0:35:99:0,105,1913	0/0:21,0:21:63.22:0,63,1162	0/0:9,0:9:27.09:0,27,503	0/0:41,0:41:99:0,123,2225	0/0:17,0:17:48.16:0,48,895	0/0:8,0:8:24.08:0,24,448	0/0:38,0:38:99:0,114,2089	0/0:13,0:13:39.13:0,39,727	0/0:26,0:26:75.25:0,75,1369	0/0:27,0:27:78.27:0,78,1440	0/0:3,0:3:9.03:0,9,168
chr10	62516138	.	TTCTCTCTCTCTCTCTC	T	4334.44	PASS	AB=0.814;AC=35;AF=0.648;AN=54;BaseQRankSum=4.067;DP=607;FS=4.884;HRun=0;HaplotypeScore=234.6337;InbreedingCoeff=0.3467;MQ=68.17;MQ0=19;MQRankSum=-2.032;QD=11.41;ReadPosRankSum=-1.305;VQSLOD=3.5157;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:80.23:0,80,1602	0/0:11,0:10:6.02:0,6,213	./.	0/0:55,0:26:3.48:0,3,33	0/0:15,0:19:18.05:0,18,349	1/1:7,6:14:0.97:149,1,0	1/1:28,5:33:3.01:94,3,0	0/0:26,0:26:9.03:0,9,167	1/1:10,4:13:2.31:129,2,0	1/1:20,0:21:8.08:225,8,0	0/0:6,6:12:2.74:0,3,12	1/1:17,0:16:9.03:179,9,0	1/1:16,2:19:17.83:607,18,0	1/1:10,5:15:6.02:260,6,0	0/1:16,0:16:13.80:96,0,14	1/1:11,2:14:9.50:252,10,0	0/0:20,0:26:30.10:0,30,914	0/1:6,2:8:13.54:280,0,14	1/1:18,5:23:9.38:244,9,0	1/1:15,8:24:19.87:273,20,0	0/1:18,8:26:11.23:60,0,11	1/1:23,0:24:6:56,6,0	0/1:7,0:11:13.21:13,0,21	1/1:15,0:17:15.45:324,15,0	1/1:10,7:17:3.01:111,3,0	0/1:24,10:34:5.19:341,0,5	1/1:10,6:16:14.54:512,15,0	1/1:10,5:12:3.01:131,3,0
chr10	62516247	.	TGTGTGTGA	T	2146.02	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.112;DP=915;FS=2.070;HRun=0;HaplotypeScore=243.3993;InbreedingCoeff=0.9751;MQ=55.15;MQ0=15;MQRankSum=-4.266;QD=26.83;ReadPosRankSum=-2.073;VQSLOD=2.7087;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:60,0:60:99:0,132,4679	1/1:2,9:11:15.05:348,15,0	0/0:36,0:13:20.82:0,21,390	0/0:34,0:13:10.39:0,10,135	0/0:30,0:30:78.27:0,78,2837	0/0:24,0:24:69.24:0,69,2642	0/0:42,0:42:99:0,102,3198	1/1:19,26:36:62.92:1077,63,0	0/0:28,0:28:63.22:0,63,2354	0/0:47,0:47:99:0,120,4161	0/0:12,0:12:20.63:0,21,750	0/0:34,0:34:87.20:0,87,3381	0/0:38,0:38:99:0,108,4000	0/0:26,0:26:69.22:0,69,2445	0/0:60,0:60:99:0,138,4640	0/0:41,0:41:99:0,108,4029	1/1:13,10:23:39.09:862,39,0	0/0:33,0:33:83.06:0,83,2803	0/0:28,0:25:48.11:0,48,1248	0/0:32,0:31:60:0,60,1828	0/0:78,0:77:99:0,171,6053	0/0:25,0:25:54.18:0,54,1904	0/0:18,0:18:42.13:0,42,1452	0/0:35,0:35:63.19:0,63,2168	0/0:17,0:17:33.11:0,33,1276	0/0:36,0:35:80.36:0,80,3102	0/0:12,0:12:30.10:0,30,992	0/0:9,0:9:27.09:0,27,1041
chr10	62516329	.	G	GTGTGAGT	308.71	PASS	AB=0.733;AC=1;AF=0.018;AN=56;BaseQRankSum=4.461;DP=1009;FS=5.144;HRun=0;HaplotypeScore=269.1681;InbreedingCoeff=-0.0183;MQ=58.25;MQ0=8;MQRankSum=-3.901;QD=28.06;ReadPosRankSum=-1.387;VQSLOD=2.8324;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:47:99:0,122,2973	0/0:14,0:14:36.12:0,36,954	0/0:40,0:19:45.04:0,45,580	0/0:56,0:27:24.67:0,25,969	0/0:26,0:26:70.47:0,70,1747	0/0:28,0:28:75.08:0,75,1674	0/0:47,0:47:99:0,135,3173	0/0:33,0:33:87.19:0,87,1757	0/1:7,4:11:44.03:383,0,44	0/0:44,0:44:99:0,129,2995	0/0:11,0:11:21.07:0,21,543	0/0:32,0:32:90.30:0,90,2220	0/0:46,0:46:99:0,132,3169	0/0:29,0:29:87.29:0,87,2096	0/0:54,0:54:99:0,139,2746	0/0:51,0:51:99:0,150,3451	0/0:32,0:32:78.25:0,78,2062	0/0:38,0:38:38.70:0,39,2363	0/0:30,0:30:84.24:0,84,1876	0/0:34,0:34:96.31:0,96,2317	0/0:122,0:122:99:0,340,7965	0/0:18,0:18:33.17:0,33,683	0/0:28,0:28:49.10:0,49,1182	0/0:51,0:49:99:0,108,2312	0/0:17,0:17:42.13:0,42,981	0/0:29,0:29:84.27:0,84,2097	0/0:25,0:24:72.23:0,72,1832	0/0:15,0:15:45.15:0,45,1176
chr10	62516335	.	AGT	A	2533.16	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=10.134;DP=1025;FS=0.940;HRun=0;HaplotypeScore=169.0732;InbreedingCoeff=0.9915;MQ=59.63;MQ0=9;MQRankSum=-0.136;QD=23.24;ReadPosRankSum=1.874;VQSLOD=4.3654;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:49:99:0,132,2172	0/0:16,0:16:38.87:0,39,640	0/0:46,0:21:24.63:0,25,335	0/0:68,0:33:53.21:0,53,720	0/0:26,0:26:75.26:0,75,1261	0/0:26,0:26:63.22:0,63,1080	0/0:49,0:49:99:0,123,2065	0/0:32,0:32:81.28:0,81,1355	1/1:10,1:11:13.38:139,13,0	0/0:43,0:43:99:0,105,1736	0/0:12,0:12:21.06:0,21,333	0/0:33,0:33:87.30:0,87,1452	0/0:46,0:46:99:0,123,2006	0/0:29,0:29:78.27:0,78,1317	0/0:48,0:48:99:0,120,1950	0/0:46,0:46:99:0,129,2099	0/0:35,0:33:76.61:0,77,1392	0/0:37,1:38:69.40:0,69,1540	0/0:29,0:27:69.19:0,69,1144	0/0:33,0:33:84.27:0,84,1378	0/0:124,0:124:99:0,312,5241	1/1:2,18:20:26.60:359,27,0	1/1:0,27:27:44.42:599,44,0	1/1:12,39:49:99:1594,121,0	0/0:15,0:15:32.86:0,33,571	0/0:29,0:29:87.28:0,87,1461	0/0:27,0:26:78.23:0,78,1250	0/0:16,0:16:45.13:0,45,745
chr10	62516371	.	A	AGT	141.75	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.363;DP=1146;FS=0.000;HRun=0;HaplotypeScore=193.8861;InbreedingCoeff=0.9771;MQ=58.89;MQ0=11;MQRankSum=-3.058;QD=10.90;ReadPosRankSum=-3.072;VQSLOD=2.9302;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:63,0:62:99:0,159,2025	0/0:11,0:11:18.04:0,18,238	0/0:58,0:30:41.75:0,42,690	0/0:78,0:33:29.56:0,30,346	0/0:27,0:27:78.26:0,78,1034	0/0:30,0:30:78.12:0,78,1036	0/0:43,0:43:99:0,120,1575	0/0:46,0:45:99:0,105,1299	1/1:5,8:13:15.52:231,16,0	0/0:43,0:43:99:0,117,1539	0/0:19,0:19:54.18:0,54,718	0/0:37,0:37:93.28:0,93,1208	0/0:51,0:51:99:0,150,1917	0/0:44,0:44:99:0,102,1322	0/0:52,0:52:99:0,139,1824	0/0:53,0:53:99:0,135,1765	0/0:38,0:36:90.25:0,90,1163	0/0:33,0:33:83.72:0,84,1064	0/0:20,0:19:48.06:0,48,598	0/0:28,0:28:71.86:0,72,899	0/0:140,0:140:99:0,340,4338	0/0:26,0:26:60.17:0,60,785	0/0:33,0:33:69.21:0,69,907	0/0:56,0:54:99:0,135,1698	0/0:15,0:15:45.14:0,45,571	0/0:48,0:46:99:0,127,1611	0/0:22,0:22:45.13:0,45,583	0/0:18,0:18:45.15:0,45,597
chr10	62516413	.	A	AGT	4304.37	PASS	AB=0.575;AC=6;AF=0.107;AN=56;BaseQRankSum=-8.487;DP=1210;FS=3.509;HRun=0;HaplotypeScore=187.1792;InbreedingCoeff=0.6303;MQ=55.64;MQ0=22;MQRankSum=1.369;QD=30.53;ReadPosRankSum=-2.825;VQSLOD=5.2893;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:59,0:58:99:0,154,2053	0/1:1,11:12:16.50:343,0,16	0/0:41,0:13:24.03:0,24,292	0/0:46,0:17:29.33:0,29,314	0/0:34,0:33:84.25:0,84,1100	0/0:28,0:27:66.14:0,66,848	0/0:41,0:41:87.24:0,87,1143	0/1:28,39:60:87.92:1511,0,88	1/1:5,11:16:24.04:386,24,0	0/0:49,0:48:99:0,117,1516	0/0:27,0:27:59.11:0,59,888	0/0:52,0:52:99:0,138,1849	0/0:62,0:62:99:0,159,2045	0/0:48,0:48:99:0,105,1391	0/0:71,0:71:99:0,156,2074	0/0:55,0:55:99:0,147,1953	1/1:9,35:41:99:2064,123,0	0/0:26,0:26:57.19:0,57,767	0/0:29,0:23:56.85:0,57,756	0/0:27,0:27:74.98:0,75,947	0/0:133,0:132:99:0,316,4189	0/0:36,0:36:75.23:0,75,997	0/0:31,0:31:75.40:0,75,973	0/0:54,0:51:80.44:0,80,1580	0/0:20,0:20:47.91:0,48,597	0/0:52,0:52:99:0,110,1596	0/0:20,0:20:42.57:0,43,517	0/0:26,0:26:75.11:0,75,940
chr10	62516476	.	G	GAA	41.37	PASS	AB=0.692;AC=1;AF=0.018;AN=56;BaseQRankSum=5.925;DP=1225;FS=0.000;HRun=0;HaplotypeScore=203.2842;InbreedingCoeff=-0.0023;MQ=54.06;MQ0=21;MQRankSum=-5.939;QD=2.30;ReadPosRankSum=-3.742;VQSLOD=1.4651;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:58:99:0,163,2625	0/0:13,0:12:33.11:0,33,535	0/0:43,1:9:15.28:0,15,283	0/0:49,0:18:17.31:0,17,357	0/0:32,0:32:84:0,84,1363	0/0:26,0:25:66.22:0,66,1065	0/0:67,0:67:99:0,184,2951	0/0:52,0:50:99:0,144,2288	0/1:10,8:18:19.81:116,0,20	0/0:64,0:64:99:0,187,3004	0/0:25,0:25:68.34:0,68,1113	0/0:54,0:54:99:0,138,2203	0/0:53,0:53:99:0,157,2524	0/0:46,0:46:99:0,113,1800	0/0:61,0:60:99:0,165,2642	0/0:66,0:66:99:0,177,2873	0/0:39,0:38:99:0,112,1812	0/0:28,1:29:20.28:0,20,1127	0/0:19,0:17:10.89:0,11,636	0/0:33,0:33:90.31:0,90,1464	0/0:129,0:127:99:0,308,4922	0/0:33,0:33:81.17:0,81,1263	0/0:30,0:30:80.80:0,81,1318	0/0:62,0:62:99:0,160,2579	0/0:28,0:28:80.85:0,81,1312	0/0:44,0:44:99:0,126,2022	0/0:28,0:28:78.27:0,78,1257	0/0:22,0:22:54.22:0,54,913
chr10	62516603	.	AGT	A	2209.12	PASS	AB=0.567;AC=4;AF=0.071;AN=56;BaseQRankSum=-1.195;DP=974;FS=16.257;HRun=0;HaplotypeScore=273.9773;InbreedingCoeff=0.4408;MQ=52.30;MQ0=6;MQRankSum=3.912;QD=21.87;ReadPosRankSum=-0.218;VQSLOD=2.6927;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,129,2140	0/1:5,17:22:26.02:340,0,26	0/0:29,0:17:41.43:0,41,552	0/0:42,0:28:30.63:0,31,600	0/0:21,0:21:51.16:0,51,856	0/0:25,0:25:48.09:0,48,721	0/0:42,0:42:65.69:0,66,883	0/1:10,31:32:53.09:700,0,53	0/0:33,0:33:69.17:0,69,1102	0/0:55,0:54:99:0,140,2026	0/0:15,0:15:8.27:0,8,137	0/0:44,0:44:99:0,102,1491	0/0:40,0:40:92.89:0,93,1394	0/0:48,0:48:81.73:0,82,1208	0/0:44,0:44:60.16:0,60,842	0/0:41,0:41:75.23:0,75,1093	1/1:15,23:37:93.25:1285,93,0	0/0:18,0:17:33:0,33,474	0/0:26,0:24:63.03:0,63,935	0/0:28,0:28:32.25:0,32,513	0/0:73,1:73:69.45:0,69,1141	0/0:31,0:31:84.24:0,84,1378	0/0:18,0:18:48.16:0,48,822	0/0:53,0:53:99:0,126,2061	0/0:22,0:22:18.04:0,18,263	0/0:45,0:45:99:0,125,1843	0/0:20,0:20:45.62:0,46,678	0/0:11,0:11:21.07:0,21,339
chr10	62516617	.	GGTGTGAGT	G	17016.73	PASS	AB=0.778;AC=33;AF=0.589;AN=56;BaseQRankSum=8.520;DP=915;FS=2.354;HRun=0;HaplotypeScore=290.7627;InbreedingCoeff=0.8923;MQ=52.36;MQ0=7;MQRankSum=-13.496;QD=31.11;ReadPosRankSum=-0.526;VQSLOD=4.2835;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,123,4306	0/0:20,0:20:38.86:0,39,1361	0/0:32,0:18:23.87:0,24,460	0/0:40,0:25:27.48:0,27,1073	0/0:19,0:19:45.15:0,45,1727	1/1:9,19:28:15.11:662,15,0	1/1:12,29:41:42.18:867,42,0	0/0:40,0:31:54.19:0,54,1559	0/0:32,0:32:63.22:0,63,2240	1/1:13,36:48:99:2442,99,0	1/1:3,12:15:2.51:80,3,0	1/1:10,28:38:56.70:1286,57,0	1/1:5,30:35:71.88:1570,72,0	1/1:10,31:41:59.93:1253,60,0	1/1:12,30:43:65.97:1294,66,0	1/1:6,32:38:72.07:1500,72,0	0/0:37,0:36:90.27:0,90,3291	0/1:10,4:13:31.78:438,0,32	1/1:11,14:21:39.08:857,39,0	1/1:7,19:26:28.25:232,28,0	1/1:50,16:65:50.66:753,51,0	0/0:26,0:26:60.21:0,60,2298	0/0:19,0:19:48.16:0,48,1815	0/0:53,0:53:99:0,107,4142	1/1:2,14:16:18.90:297,19,0	1/1:17,26:43:87.27:2140,87,0	1/1:6,15:21:39.05:1032,39,0	1/1:3,5:8:12.04:314,12,0
chr10	62516623	.	AGT	A	3650.84	PASS	AB=0.992;AC=33;AF=0.589;AN=56;BaseQRankSum=16.262;DP=861;FS=9.595;HRun=0;HaplotypeScore=259.6164;InbreedingCoeff=0.7452;MQ=52.55;MQ0=8;MQRankSum=-13.895;QD=6.80;ReadPosRankSum=4.840;VQSLOD=1.4246;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,132,2252	0/0:19,0:19:39.41:0,39,677	0/0:33,0:15:26.86:0,27,362	0/1:39,1:25:0.78:1,0,542	0/0:20,0:20:54.17:0,54,918	1/1:22,0:23:26.07:134,26,0	0/1:38,0:38:3.28:142,0,3	0/0:39,0:30:75.24:0,75,1190	0/0:33,0:33:66.23:0,66,1154	1/1:42,1:42:58.79:555,59,0	1/1:15,0:15:2.84:15,3,0	1/1:31,0:31:48.49:296,48,0	1/1:33,0:33:66.37:397,66,0	1/1:40,0:40:42.86:246,43,0	1/1:38,1:41:30.12:207,30,0	1/1:35,0:35:48.51:253,49,0	0/0:35,1:36:83.33:0,83,1592	1/1:14,2:15:0.99:101,1,0	1/1:22,0:18:35.20:271,35,0	1/1:22,0:22:0.86:64,1,0	1/1:51,3:59:10.97:244,11,0	0/0:27,0:27:66.23:0,66,1156	0/0:19,1:20:54.17:0,54,906	0/0:49,1:50:94.58:0,95,1891	1/1:15,0:15:4.56:27,5,0	1/1:35,0:35:79.23:478,79,0	0/1:19,0:19:2.72:140,0,3	1/1:8,0:8:11.53:81,12,0
chr10	62516705	.	AGT	A	1862.95	PASS	AB=0.921;AC=18;AF=0.321;AN=56;BaseQRankSum=5.109;DP=967;FS=7.325;HRun=0;HaplotypeScore=189.3897;InbreedingCoeff=-0.1291;MQ=52.85;MQ0=16;MQRankSum=2.025;QD=3.46;ReadPosRankSum=1.807;VQSLOD=2.2649;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,1:46:48.03:0,48,493	0/0:15,1:16:1.77:0,2,445	0/0:36,0:13:3.90:0,4,47	0/0:36,0:10:4.46:0,4,20	0/0:16,0:27:18.02:0,18,198	0/0:20,0:21:4.84:0,5,198	0/1:29,4:33:99:173,0,438	0/1:30,0:26:7.76:8,0,229	0/0:25,0:25:18.37:0,18,175	0/1:54,3:55:19.95:20,0,1292	0/1:25,0:25:0.18:0,0,589	0/1:28,2:29:58.62:59,0,487	0/0:25,0:25:39.06:0,39,570	0/1:30,2:32:40.16:40,0,667	0/1:42,3:44:70.75:71,0,815	0/0:44,0:45:75.90:0,76,1243	0/1:38,2:39:38.25:38,0,877	0/1:29,3:31:99:147,0,499	0/1:18,0:14:19.44:19,0,137	0/1:30,1:31:11.47:11,0,726	0/0:103,2:103:43.30:0,43,1136	0/1:16,20:38:1.70:375,0,2	1/1:12,16:28:20.32:240,20,0	1/1:26,16:46:68.07:720,68,0	0/0:22,0:22:12.97:0,13,522	0/1:33,3:37:54.85:55,0,694	0/0:22,0:22:30.10:0,30,452	0/1:12,1:12:47.81:48,0,210
chr10	62517351	.	GT	G	723.03	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.088;DP=762;FS=1.762;HRun=2;HaplotypeScore=70.3314;InbreedingCoeff=0.9995;MQ=72.06;MQ0=2;MQRankSum=-4.014;QD=34.43;ReadPosRankSum=1.220;VQSLOD=4.0340;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,114,1686	0/0:10,0:10:30.10:0,30,450	0/0:23,0:20:59.96:0,60,767	0/0:22,0:20:58.73:0,59,808	0/0:32,0:32:90.29:0,90,1315	0/0:25,0:25:75.25:0,75,1124	0/0:27,0:27:81.26:0,81,1178	0/0:36,0:36:99:0,102,1478	1/1:0,21:21:63.20:818,63,0	0/0:34,0:34:99:0,102,1511	0/0:18,0:18:51.17:0,51,764	0/0:27,0:27:81.22:0,81,1170	0/0:27,0:27:75.24:0,75,1102	0/0:33,0:33:99:0,99,1466	0/0:37,0:37:99:0,105,1573	0/0:38,1:39:78.42:0,78,1631	0/0:37,0:37:99:0,111,1637	0/0:25,0:25:72.24:0,72,1079	0/0:19,0:19:57.19:0,57,854	0/0:24,0:24:72.23:0,72,1060	0/0:56,0:56:99:0,169,2493	0/0:18,0:18:51.16:0,51,745	0/0:19,0:19:57.19:0,57,854	0/0:27,0:27:81.25:0,81,1174	0/0:22,0:22:60.18:0,60,877	0/0:24,0:24:72.24:0,72,1079	0/0:25,0:25:75.25:0,75,1123	0/0:16,0:16:48.16:0,48,717
chr10	62519385	.	G	GA	864.09	PASS	AB=0.931;AC=7;AF=0.125;AN=56;BaseQRankSum=-3.761;DP=521;FS=1.210;HRun=10;HaplotypeScore=67.3793;InbreedingCoeff=0.4309;MQ=69.88;MQ0=2;MQRankSum=-0.941;QD=7.93;ReadPosRankSum=-0.475;VQSLOD=1.7997;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,16:26:13.68:527,14,0	0/0:6,0:6:17.98:0,18,148	0/0:25,0:14:11.47:0,11,107	0/0:29,0:17:30.62:0,31,215	1/1:5,11:16:42.09:435,42,0	0/0:16,0:16:35.94:0,36,293	0/1:21,1:22:6.67:7,0,362	0/0:27,0:27:44.71:0,45,351	0/0:16,0:16:26.84:0,27,221	0/0:20,0:22:1.60:0,2,296	0/0:15,0:15:35.93:0,36,293	0/0:16,1:17:10.34:0,10,289	0/0:19,0:20:49.93:0,50,394	0/0:12,0:12:35.96:0,36,295	0/0:19,0:19:47.93:0,48,394	0/0:15,1:16:3.97:0,4,239	0/0:18,1:19:9.99:0,10,288	0/0:18,0:18:47.94:0,48,393	0/0:19,0:20:43.97:0,44,350	0/1:22,2:24:10.06:10,0,340	0/0:17,0:18:46.97:0,47,375	0/0:6,0:6:14.98:0,15,123	0/0:16,1:17:15.95:0,16,337	0/1:19,2:21:19.09:19,0,275	0/0:18,0:18:47.90:0,48,388	0/0:23,1:24:24.93:0,25,408	0/0:18,0:19:43.94:0,44,350	0/0:12,0:12:35.96:0,36,295
chr10	62519452	.	GT	G	11470.91	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-2.899;DP=454;FS=0.000;HRun=7;HaplotypeScore=49.4274;InbreedingCoeff=0.9808;MQ=76.52;MQ0=0;MQRankSum=-4.357;QD=26.61;ReadPosRankSum=4.128;VQSLOD=5.1804;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,25:26:72.16:734,72,0	1/1:0,7:7:21.05:214,21,0	0/0:10,0:10:17.75:0,18,216	0/0:13,0:12:14.62:0,15,146	1/1:0,14:14:42.10:428,42,0	1/1:0,16:16:41.93:428,42,0	1/1:1,14:15:36.08:367,36,0	1/1:6,24:30:66.12:665,66,0	1/1:0,13:13:33.08:337,33,0	1/1:1,11:12:33.07:337,33,0	1/1:0,15:15:39.08:398,39,0	1/1:1,12:13:36.08:367,36,0	1/1:3,11:14:33.07:337,33,0	1/1:1,9:10:27.06:275,27,0	1/1:2,12:14:33.07:337,33,0	1/1:0,13:13:33.08:337,33,0	1/1:4,28:32:69.15:704,69,0	1/1:1,17:18:51.12:520,51,0	1/1:1,16:17:29.14:467,29,0	1/1:2,12:14:27.05:275,27,0	1/1:2,28:30:84.18:851,84,0	1/1:0,9:9:27.06:275,27,0	1/1:0,9:9:27.06:275,27,0	1/1:0,13:13:33.08:337,33,0	1/1:1,14:15:42.09:429,42,0	1/1:0,33:33:93.02:948,93,0	1/1:0,13:13:39.09:398,39,0	1/1:2,14:16:42.10:428,42,0
chr10	62519960	.	T	TAAACA	633.19	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=0.752;DP=673;FS=2.522;HRun=0;HaplotypeScore=122.2726;InbreedingCoeff=0.9529;MQ=72.53;MQ0=0;MQRankSum=-1.033;QD=25.33;ReadPosRankSum=-0.582;VQSLOD=3.2488;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,126,2149	0/0:17,0:17:39.13:0,39,731	0/0:24,0:24:19.51:0,20,464	0/0:17,0:15:18.06:0,18,255	0/0:18,0:18:36.12:0,36,644	0/0:15,0:15:36.12:0,36,676	0/0:23,0:23:45.14:0,45,793	0/0:32,0:32:60.17:0,60,895	1/1:11,14:25:30.07:728,30,0	0/0:31,0:31:49.61:0,50,980	0/0:14,0:14:33.11:0,33,578	0/0:22,0:22:54.19:0,54,1012	0/0:21,0:21:39.13:0,39,657	0/0:23,0:23:57.18:0,57,996	0/0:26,0:26:72.24:0,72,1244	0/0:25,0:25:60.19:0,60,1031	0/0:46,0:46:99:0,117,2051	0/0:19,0:19:48.16:0,48,795	0/0:15,0:15:21.95:0,22,334	0/0:28,0:28:66.21:0,66,1182	0/0:14,0:14:29.75:0,30,433	0/0:25,0:25:63.21:0,63,1083	0/0:21,0:21:45.15:0,45,768	0/0:32,0:31:71.97:0,72,1183	0/0:24,0:24:60.20:0,60,1064	0/0:29,0:29:69.23:0,69,1213	0/0:30,0:30:69.23:0,69,1214	0/0:5,0:5:12.04:0,12,222
chr10	62520765	.	G	GTC	1820.87	PASS	AB=0.960;AC=34;AF=0.630;AN=54;BaseQRankSum=-0.121;DP=527;FS=7.338;HRun=0;HaplotypeScore=96.0344;InbreedingCoeff=0.3491;MQ=70.78;MQ0=25;MQRankSum=1.627;QD=5.59;ReadPosRankSum=-1.656;VQSLOD=2.1791;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:15.46:0,15,241	0/0:10,0:10:6.20:0,6,82	0/0:53,0:19:11.95:0,12,109	0/0:53,0:27:23.66:0,24,196	0/1:15,0:15:8.51:9,0,61	1/1:10,0:10:14.93:117,15,0	0/1:24,0:24:63.45:130,0,63	0/0:24,0:24:29.81:0,30,218	1/1:10,0:16:1.62:5,2,0	1/1:9,10:19:29.84:292,30,0	1/1:10,0:10:11.03:81,11,0	1/1:8,2:10:11.89:144,12,0	1/1:17,0:17:2.95:37,3,0	0/1:13,0:13:1.07:116,0,1	1/1:17,0:17:11.97:99,12,0	1/1:19,0:19:9.03:112,9,0	0/1:28,0:28:22.67:23,0,63	1/1:13,0:13:14.90:114,15,0	0/1:23,0:23:23.56:148,0,24	0/1:11,0:11:0:1,0,0	0/1:10,9:18:15.56:77,0,16	./.	0/1:8,0:8:1.25:1,0,78	0/0:26,0:25:26.24:0,26,188	1/1:14,1:15:2.86:47,3,0	1/1:7,12:18:9.54:299,10,0	1/1:10,0:10:14.68:105,15,0	1/1:10,0:10:3.01:38,3,0
chr10	62520784	.	T	TCACACA	783.13	PASS	AB=0.970;AC=15;AF=0.268;AN=56;BaseQRankSum=5.443;DP=541;FS=13.158;HRun=0;HaplotypeScore=125.7009;InbreedingCoeff=-0.0678;MQ=52.18;MQ0=29;MQRankSum=-0.506;QD=3.53;ReadPosRankSum=-0.401;VQSLOD=1.8661;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:38:20.41:0,20,540	1/1:6,0:10:0.43:121,0,0	0/0:41,0:7:15.04:0,15,223	0/0:39,0:12:26.31:0,26,442	0/1:19,0:19:99:196,0,125	0/1:10,0:10:15.87:16,0,176	0/0:21,0:21:28.68:0,29,499	0/1:21,0:19:68.86:84,0,69	0/0:13,0:13:2.42:0,2,88	0/0:20,0:20:47.37:0,47,420	0/0:9,0:9:15.04:0,15,203	0/1:6,0:12:0.03:0,0,24	0/1:19,0:19:31.81:47,0,32	0/0:17,0:17:12:0,12,235	0/0:21,0:21:14.28:0,14,217	0/1:16,0:16:0.08:92,0,0	1/1:12,13:27:6.39:154,6,0	0/0:7,0:15:7.04:0,7,196	0/0:23,0:23:21.59:0,22,614	0/0:16,0:16:8.28:0,8,84	0/1:24,0:22:13.28:13,0,78	0/1:9,0:9:18.75:19,0,35	0/1:9,0:9:69.55:70,0,109	0/1:27,0:26:99:109,0,317	0/0:16,0:16:5.85:0,6,70	0/1:18,0:17:9.26:9,0,424	0/0:17,0:17:3.51:0,4,205	0/0:11,0:10:2.80:0,3,13
chr10	62520786	.	T	TCTCACA	4410.93	PASS	AB=0.874;AC=36;AF=0.643;AN=56;BaseQRankSum=-3.326;DP=571;FS=3.427;HRun=0;HaplotypeScore=126.7698;InbreedingCoeff=-0.1896;MQ=52.19;MQ0=31;MQRankSum=1.303;QD=8.91;ReadPosRankSum=0.626;VQSLOD=3.8679;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:31,1:43:21.17:21,0,226	0/1:9,0:9:71.39:76,0,71	0/0:40,0:6:11.58:0,12,109	0/0:36,0:12:23.66:0,24,196	0/1:21,0:21:42.97:307,0,43	1/1:11,0:11:21:232,21,0	0/1:18,0:24:63.87:237,0,64	0/1:23,0:21:99:114,0,164	0/1:13,0:14:0.14:66,0,0	1/1:21,0:21:40.46:464,40,0	1/1:7,2:11:11.21:82,11,0	1/1:13,0:13:12.03:234,12,0	0/1:4,14:20:9.47:103,0,9	0/1:10,0:19:0.97:172,0,1	0/1:10,0:21:2.54:114,0,3	1/1:1,12:20:9.03:275,9,0	0/1:28,0:27:60.76:188,0,61	1/1:16,0:15:14.99:165,15,0	0/1:20,0:20:44.48:240,0,44	1/1:1,12:17:3.01:37,3,0	0/1:26,0:23:3.53:309,0,4	0/1:11,0:11:2.01:43,0,2	0/1:12,0:12:71.40:71,0,75	0/1:25,0:25:63.33:63,0,155	1/1:4,10:16:2.76:47,3,0	1/1:20,0:18:21.68:548,22,0	0/1:8,0:20:0.75:154,0,1	1/1:1,0:10:3.01:50,3,0
chr10	62521439	.	CGTGT	C	819.33	PASS	AB=0.947;AC=23;AF=0.548;AN=42;BaseQRankSum=4.382;DP=553;FS=1.371;HRun=0;HaplotypeScore=93.8158;InbreedingCoeff=0.4448;MQ=64.36;MQ0=16;MQRankSum=1.687;QD=2.79;ReadPosRankSum=2.957;VQSLOD=1.1966;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:26:10.86:0,11,590	1/1:8,0:8:3.01:38,3,0	0/0:26,0:20:0.47:0,0,1	./.	0/0:12,0:11:20.74:0,21,266	0/0:16,0:15:0:0,0,0	./.	0/0:21,0:21:0.47:0,0,1	0/1:7,1:8:0:0,0,0	0/0:18,0:18:2.94:0,3,18	./.	1/1:24,0:24:6.01:58,6,0	1/1:13,0:13:6.02:86,6,0	0/1:17,0:15:0.10:0,0,0	1/1:14,0:15:12:130,12,0	1/1:20,0:20:3.48:30,3,0	1/1:33,0:45:6.53:60,7,0	0/1:19,1:20:62.32:76,0,62	0/0:14,0:12:0.89:0,1,2	./.	1/1:43,0:42:14.80:139,15,0	./.	./.	1/1:33,24:56:17.51:216,18,0	1/1:8,0:7:6.02:81,6,0	1/1:14,0:13:4.43:28,4,0	0/0:11,0:11:3.74:0,4,12	./.
chr10	62521479	.	TGTGTGTGTGC	T	2183.76	PASS	AB=0.956;AC=22;AF=0.440;AN=50;BaseQRankSum=0.813;DP=531;FS=8.816;HRun=0;HaplotypeScore=123.9333;InbreedingCoeff=0.0676;MQ=51.32;MQ0=26;MQRankSum=2.221;QD=7.86;ReadPosRankSum=0.544;VQSLOD=1.9855;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:38:61.77:0,62,2064	1/1:6,0:5:3.01:60,3,0	0/0:8,0:3:7.88:0,8,48	./.	0/0:12,0:11:24.06:0,24,710	./.	./.	0/0:19,0:18:15.63:0,16,237	1/1:5,0:4:0.47:1,0,0	0/1:17,0:17:64.25:145,0,64	0/0:4,0:4:0:0,0,0	0/1:30,0:30:8.24:128,0,8	0/1:13,0:13:24.67:88,0,25	0/1:21,0:19:10.24:14,0,10	1/1:18,0:18:22.56:209,23,0	0/1:18,0:17:15.19:56,0,15	0/0:37,0:35:25.42:0,25,278	0/1:31,1:32:99:262,0,322	0/1:13,0:10:11.26:86,0,11	1/1:12,0:10:1.25:3,1,0	1/1:39,0:35:40.31:597,40,0	0/0:10,0:10:3.01:0,3,86	0/0:5,0:3:7.50:0,8,46	0/0:54,0:51:51.88:0,52,1067	1/1:10,0:10:21.89:249,22,0	0/1:10,12:21:23.92:237,0,24	0/1:15,1:16:11.02:163,0,11	0/1:6,0:6:10:39,0,10
chr10	62521481	.	TGTGTGTGC	T	3054.24	PASS	AB=1.000;AC=31;AF=0.620;AN=50;BaseQRankSum=-0.152;DP=518;FS=8.881;HRun=0;HaplotypeScore=107.7918;InbreedingCoeff=0.6477;MQ=51.62;MQ0=26;MQRankSum=3.432;QD=11.40;ReadPosRankSum=0.585;VQSLOD=1.4552;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:38:41.66:0,42,1678	1/1:5,0:4:3.01:61,3,0	0/0:8,0:3:7.88:0,8,48	./.	0/0:12,0:11:21.04:0,21,513	./.	./.	0/0:20,0:19:17.12:0,17,264	1/1:5,0:4:0.47:1,0,0	1/1:17,0:17:19.04:292,19,0	0/0:4,0:4:0:0,0,0	1/1:6,19:25:6.65:152,7,0	1/1:13,0:13:8.25:138,8,0	1/1:5,16:19:0.37:1,0,0	1/1:17,0:17:33.02:431,33,0	1/1:4,14:17:3.83:86,4,0	0/0:35,0:33:7.97:0,8,199	0/1:32,0:32:68.87:411,0,69	1/1:13,0:11:10.72:129,11,0	1/1:3,8:9:1.25:3,1,0	1/1:39,0:35:59.40:616,59,0	0/0:8,0:8:3.01:0,3,59	0/0:5,0:3:8.92:0,9,62	0/0:55,0:52:68.62:0,69,733	1/1:12,0:12:30.01:353,30,0	1/1:21,0:20:11.85:249,12,0	1/1:15,0:15:22.51:229,23,0	1/1:4,0:4:8.97:72,9,0
chr10	62521483	.	TGTGTGC	T	2998.79	PASS	AB=1.000;AC=31;AF=0.596;AN=52;BaseQRankSum=0.267;DP=496;FS=7.688;HRun=0;HaplotypeScore=89.8605;InbreedingCoeff=0.6514;MQ=53.47;MQ0=25;MQRankSum=0.992;QD=10.56;ReadPosRankSum=1.024;VQSLOD=1.6033;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:39:11.40:0,11,1313	1/1:5,0:4:3.01:37,3,0	0/0:8,0:3:7.88:0,8,48	0/0:13,0:1:2.90:0,3,16	0/0:12,0:11:17.99:0,18,319	./.	./.	0/0:19,0:18:16.85:0,17,264	0/1:5,0:4:0:0,0,0	1/1:15,0:15:36.88:337,37,0	0/0:0,4:4:0:0,0,0	1/1:23,0:23:6.02:103,6,0	1/1:12,0:12:14.44:136,14,0	0/1:20,0:19:0.09:0,0,0	1/1:16,0:16:32.96:302,33,0	1/1:16,0:15:6.02:96,6,0	0/1:32,0:30:72.54:73,0,159	1/1:31,0:31:26.36:651,26,0	1/1:12,0:10:15.04:137,15,0	1/1:11,0:9:1.25:3,1,0	1/1:38,0:35:59.86:513,60,0	0/0:7,0:7:3.01:0,3,37	0/0:4,0:3:8.92:0,9,62	0/0:55,0:52:52.44:0,52,500	1/1:10,0:10:30:287,30,0	1/1:19,0:18:12.93:220,13,0	1/1:15,0:15:28.16:203,28,0	1/1:4,0:4:8.98:72,9,0
chr10	62521489	.	CGT	C	434.97	PASS	AB=0.926;AC=24;AF=0.462;AN=52;BaseQRankSum=5.900;DP=486;FS=25.221;HRun=0;HaplotypeScore=81.6977;InbreedingCoeff=0.3552;MQ=55.97;MQ0=17;MQRankSum=-0.348;QD=1.63;ReadPosRankSum=-1.289;VQSLOD=0.0502;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:39:16.53:0,17,1095	1/1:5,0:4:2.99:24,3,0	0/0:8,0:3:6.01:0,6,74	0/0:16,0:3:5.78:0,6,33	0/0:7,0:7:5.52:0,6,105	./.	./.	1/1:20,0:19:9.55:39,10,0	0/1:1,4:4:0:0,0,0	1/1:14,0:14:9.97:40,10,0	0/0:4,0:4:0.47:0,0,1	1/1:21,0:21:5.48:24,5,0	1/1:11,0:11:9.10:51,9,0	0/0:19,0:18:5.85:0,6,49	1/1:15,0:15:9.44:77,9,0	0/1:17,0:16:6.25:6,0,19	0/1:32,0:31:22.91:48,0,23	1/1:25,2:27:9.34:166,9,0	1/1:11,0:10:2.59:13,3,0	0/0:9,0:9:3:0,3,25	0/1:42,0:40:29.64:34,0,30	0/0:8,0:8:6.01:0,6,62	0/0:4,0:3:9.03:0,9,135	0/0:57,0:54:74.34:0,74,982	1/1:12,0:12:7.96:54,8,0	0/1:18,0:17:14.27:14,0,39	0/1:17,0:17:1.13:1,0,41	0/0:3,0:3:0.10:0,0,0
chr10	62521634	.	G	GGT	2018.82	PASS	AB=0.869;AC=39;AF=0.722;AN=54;BaseQRankSum=0.504;DP=671;FS=0.000;HRun=0;HaplotypeScore=185.8784;InbreedingCoeff=0.3909;MQ=55.92;MQ0=10;MQRankSum=-0.320;QD=3.95;ReadPosRankSum=-1.564;VQSLOD=2.5209;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:15,16:33:1.14:185,0,1	0/0:10,0:10:17.63:0,18,111	./.	0/0:41,0:24:5.85:0,6,46	0/1:11,8:18:14.08:39,0,14	1/1:15,0:15:8.72:95,9,0	1/1:25,0:30:3:26,3,0	0/0:22,0:22:0.46:0,0,1	1/1:24,0:24:6:52,6,0	1/1:31,0:29:29.89:254,30,0	1/1:7,1:9:3:26,3,0	1/1:26,0:30:5.94:44,6,0	1/1:20,0:20:14.59:140,15,0	1/1:22,0:22:14.98:134,15,0	1/1:18,1:23:9.47:79,9,0	1/1:28,0:31:9.01:85,9,0	0/1:26,0:26:19.37:19,0,106	1/1:15,8:24:12.04:179,12,0	1/1:18,0:15:8.87:61,9,0	1/1:16,0:16:3.01:31,3,0	0/1:38,0:38:15.22:158,0,15	0/0:26,0:26:24.26:0,24,120	0/1:13,0:13:0.47:0,0,31	0/0:30,0:28:14.12:0,14,69	1/1:22,0:22:12.01:134,12,0	1/1:31,0:32:32.85:297,33,0	1/1:21,0:24:8.99:87,9,0	1/1:9,0:9:8.84:55,9,0
chr10	62521669	.	GTGTA	G	4485.76	PASS	AB=0.993;AC=29;AF=0.518;AN=56;BaseQRankSum=-9.670;DP=650;FS=18.135;HRun=0;HaplotypeScore=150.2982;InbreedingCoeff=-0.6509;MQ=65.57;MQ0=11;MQRankSum=2.337;QD=7.72;ReadPosRankSum=-0.913;VQSLOD=2.9207;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:39,0:39:99:209,0,162	0/1:15,0:15:99:111,0,161	0/0:36,0:21:28.96:0,29,484	0/0:33,0:19:35.71:0,36,452	0/1:21,0:20:94.77:95,0,115	0/1:16,0:16:94.68:95,0,152	0/1:26,0:25:66.21:164,0,66	0/1:29,0:28:70.46:403,0,70	0/1:22,0:22:19.32:125,0,19	0/1:34,0:33:99:296,0,369	0/1:13,0:13:16.25:101,0,16	1/1:28,0:28:6.43:271,6,0	0/1:20,0:20:44.37:44,0,111	0/1:19,0:19:99:155,0,145	0/1:23,0:23:51.68:197,0,52	0/1:27,0:27:11.18:146,0,11	0/1:24,1:24:99:172,0,459	0/1:19,0:19:66.73:67,0,269	0/1:18,0:16:67.31:183,0,67	0/1:12,0:12:55.81:56,0,87	0/1:31,0:31:99:139,0,379	0/1:21,3:23:15.89:584,0,16	1/1:1,13:14:11.51:234,12,0	1/1:6,22:26:15.05:295,15,0	0/1:20,0:20:99:130,0,196	0/1:28,0:28:78.19:78,0,560	0/1:22,0:22:99:127,0,122	0/1:8,0:8:12.05:12,0,48
chr10	62522221	.	TGC	T	466.71	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=7.015;DP=683;FS=8.145;HRun=0;HaplotypeScore=162.2609;InbreedingCoeff=0.7652;MQ=53.62;MQ0=5;MQRankSum=-5.293;QD=10.37;ReadPosRankSum=-0.758;VQSLOD=2.7943;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:67.54:0,68,607	1/1:6,0:6:10.79:59,11,0	0/0:29,0:23:29.11:0,29,316	0/0:22,0:14:27.93:0,28,252	0/0:11,0:10:20.97:0,21,179	0/0:21,0:21:22.38:0,22,181	0/0:40,0:40:73.83:0,74,573	1/1:9,14:23:48.07:443,48,0	0/0:27,0:27:20.93:0,21,216	0/0:27,0:27:72.83:0,73,533	0/0:17,0:16:33.49:0,33,229	0/0:40,0:40:77.44:0,77,589	0/0:23,0:23:34.48:0,34,242	0/0:30,0:30:51.83:0,52,373	0/0:18,0:18:24.35:0,24,203	0/0:33,0:33:35.46:0,35,300	0/1:16,0:16:9.59:89,0,10	0/0:20,0:20:46.32:0,46,295	0/0:17,0:16:18.48:0,18,218	0/0:17,0:17:27.96:0,28,205	0/0:73,0:73:97.22:0,97,716	0/0:18,0:18:29.71:0,30,211	0/0:13,0:13:12.71:0,13,79	0/0:37,0:37:30.91:0,31,319	0/0:15,0:15:17.39:0,17,113	0/0:15,0:14:28.86:0,29,215	0/0:22,0:21:30.33:0,30,215	0/0:13,0:13:34.96:0,35,240
chr10	62522223	.	CGTGTGTGT	C	5614.14	PASS	AB=0.748;AC=35;AF=0.700;AN=50;BaseQRankSum=-0.051;DP=681;FS=0.000;HRun=0;HaplotypeScore=192.1528;InbreedingCoeff=0.4127;MQ=51.97;MQ0=5;MQRankSum=-6.552;QD=11.07;ReadPosRankSum=-2.268;VQSLOD=3.5315;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:43:42.08:0,42,1207	0/0:6,0:6:5.99:0,6,76	./.	./.	0/0:9,0:11:15.05:0,15,374	1/1:12,9:22:14.32:358,14,0	1/1:27,11:39:2.41:305,2,0	./.	0/0:25,0:26:9.01:0,9,197	1/1:24,3:27:9.44:169,9,0	1/1:12,5:16:8.90:173,9,0	1/1:24,12:37:27.03:660,27,0	1/1:16,6:22:7.58:187,8,0	1/1:21,10:31:20.23:528,20,0	1/1:9,6:17:21.07:469,21,0	1/1:14,18:33:36.11:888,36,0	0/0:16,0:16:17.89:0,18,318	1/1:13,10:23:15.05:343,15,0	1/1:11,4:14:11.93:302,12,0	1/1:10,6:17:6.02:115,6,0	0/1:54,18:72:33.35:33,0,49	0/1:12,0:18:33.74:42,0,34	0/1:6,0:13:2.57:11,0,3	0/1:23,0:39:30.63:31,0,76	1/1:5,9:16:14.94:283,15,0	0/1:12,3:14:33.26:212,0,33	1/1:11,9:20:12.41:354,12,0	1/1:11,2:13:6.02:151,6,0
chr10	62522231	.	T	TGCGTGCGTGCGTGC	2507.32	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=3.883;DP=670;FS=2.216;HRun=0;HaplotypeScore=261.3797;InbreedingCoeff=0.7465;MQ=48.96;MQ0=7;MQRankSum=-3.126;QD=33.43;ReadPosRankSum=-0.122;VQSLOD=2.6068;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:67.82:0,68,1713	1/1:5,0:5:6.02:306,6,0	0/0:20,0:13:24.09:0,24,709	0/0:27,0:12:35.43:0,35,663	0/0:17,0:16:24.52:0,25,586	0/0:19,0:19:24.98:0,25,414	0/0:36,0:36:73.69:0,74,1631	1/1:19,0:18:27.47:554,27,0	1/1:5,15:33:12.04:652,12,0	0/0:26,0:26:16.54:0,17,1513	0/0:17,0:16:29.89:0,30,723	0/0:35,0:35:73.92:0,74,1613	0/0:19,0:19:20.62:0,21,900	0/0:24,0:24:47.56:0,48,1056	0/0:16,0:16:13.93:0,14,521	0/0:33,0:33:70.55:0,71,1518	0/1:18,0:18:50.48:1133,0,50	0/0:20,0:20:40.95:0,41,1189	0/0:14,0:13:31.62:0,32,575	0/0:17,0:17:29.97:0,30,829	0/0:72,0:72:72.75:0,73,1898	0/0:23,0:23:44.84:0,45,991	0/0:15,0:15:20.07:0,20,377	0/0:39,0:39:58.45:0,58,1380	0/0:15,0:15:20.69:0,21,312	0/0:15,0:14:6.08:0,6,712	0/0:20,0:19:37.24:0,37,568	0/0:12,0:12:36.07:0,36,947
chr10	62522239	.	T	TGCGCGCGCGCGCGC	2355.03	PASS	AB=0.871;AC=5;AF=0.089;AN=56;BaseQRankSum=3.089;DP=655;FS=4.202;HRun=0;HaplotypeScore=261.8982;InbreedingCoeff=0.2691;MQ=48.39;MQ0=7;MQRankSum=-3.195;QD=35.68;ReadPosRankSum=3.157;VQSLOD=2.5817;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:64.41:0,64,2183	1/1:1,3:4:6.02:414,6,0	0/0:16,0:11:24.01:0,24,683	0/0:29,0:12:33.11:0,33,1069	0/0:17,0:16:27.55:0,28,959	0/0:20,0:20:31.05:0,31,955	0/0:35,0:35:64.14:0,64,2029	0/1:19,0:18:58.87:256,0,59	0/1:24,0:24:99:208,0,157	0/0:23,0:23:69.24:0,69,2483	0/0:17,0:16:30.10:0,30,1171	0/0:36,0:36:90.30:0,90,2987	0/0:21,0:21:41.83:0,42,1261	0/0:22,0:22:45.61:0,46,1524	0/0:14,0:14:39.13:0,39,1156	0/0:32,0:32:75.73:0,76,2491	0/1:7,8:19:53.80:1592,0,54	0/0:19,0:19:36.12:0,36,1303	0/0:11,0:11:24.07:0,24,591	0/0:20,0:20:39.13:0,39,1309	0/0:72,0:72:91.38:0,91,2848	0/0:20,0:20:44.91:0,45,1604	0/0:15,0:15:23.08:0,23,673	0/0:41,0:41:66.38:0,66,1922	0/0:17,0:17:27.09:0,27,848	0/0:16,0:15:41.72:0,42,1327	0/0:18,0:17:36.59:0,37,1064	0/0:12,0:12:36.12:0,36,1148
chr10	62523129	.	TG	T	455.96	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.646;DP=492;FS=11.270;HRun=7;HaplotypeScore=50.4422;InbreedingCoeff=0.9632;MQ=89.00;MQ0=0;MQRankSum=-1.615;QD=21.71;ReadPosRankSum=1.710;VQSLOD=2.6085;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,102,1268	0/0:6,0:6:18.03:0,18,201	0/0:22,0:21:44.28:0,44,545	0/0:18,0:18:22.74:0,23,312	0/0:13,0:13:27.09:0,27,339	0/0:14,0:14:30.10:0,30,377	0/0:16,0:16:45.09:0,45,547	0/0:22,0:22:51.14:0,51,616	1/1:2,19:21:54.12:551,54,0	0/0:15,0:15:30.10:0,30,377	0/0:9,0:9:18.04:0,18,213	0/0:15,0:15:42.13:0,42,528	0/0:13,0:13:36.12:0,36,453	0/0:14,0:14:36.08:0,36,418	0/0:16,0:16:45.11:0,45,538	0/0:14,0:14:39.10:0,39,465	0/0:36,0:36:90.26:0,90,1104	0/0:19,0:19:57.14:0,57,699	0/0:7,0:7:21.07:0,21,258	0/0:9,0:9:21.05:0,21,251	0/0:48,0:48:99:0,141,1746	0/0:13,0:13:33.01:0,33,381	0/0:11,0:11:33.11:0,33,415	0/0:19,0:19:45.14:0,45,566	0/0:14,0:14:33.09:0,33,402	0/0:24,0:24:57.17:0,57,697	0/0:18,0:18:45.14:0,45,566	0/0:7,0:7:18.06:0,18,226
chr10	62525876	.	AG	A	614.39	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.430;DP=618;FS=1.701;HRun=6;HaplotypeScore=61.9157;InbreedingCoeff=0.9633;MQ=80.66;MQ0=0;MQRankSum=-2.324;QD=22.76;ReadPosRankSum=2.197;VQSLOD=3.2198;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,132,1690	0/0:13,0:13:33.11:0,33,434	0/0:13,0:13:30.10:0,30,395	0/0:25,0:25:64.08:0,64,870	0/0:10,0:10:24.08:0,24,314	0/0:18,0:18:51.12:0,51,624	0/0:40,0:40:99:0,108,1388	0/0:29,0:29:72.14:0,72,893	1/1:0,27:27:66.17:709,66,0	0/0:12,0:12:24.06:0,24,289	0/0:20,0:20:45.15:0,45,588	0/0:23,0:23:66.21:0,66,856	0/0:19,0:19:54.17:0,54,705	0/0:23,0:23:66.21:0,66,863	0/0:27,0:27:78.25:0,78,1024	0/0:11,0:11:30.10:0,30,395	0/0:33,0:33:96.31:0,96,1261	0/0:27,0:27:78.25:0,78,1021	0/0:18,0:18:51.13:0,51,627	0/0:9,0:9:15.04:0,15,184	0/0:36,0:35:99:0,105,1347	0/0:10,0:10:27.09:0,27,353	0/0:16,0:16:45.11:0,45,545	0/0:43,0:43:99:0,129,1641	0/0:28,0:28:69.20:0,69,866	0/0:18,0:18:39.11:0,39,486	0/0:16,0:16:36.12:0,36,472	0/0:6,0:6:15.05:0,15,197
chr10	62526765	.	G	GGTGTGTGTGTGTGT	9043.57	PASS	AB=1.000;AC=43;AF=0.796;AN=54;BaseQRankSum=-4.977;DP=720;FS=14.607;HRun=0;HaplotypeScore=250.1139;InbreedingCoeff=0.3776;MQ=60.88;MQ0=4;MQRankSum=-2.232;QD=15.17;ReadPosRankSum=0.616;VQSLOD=2.3658;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:34,0:46:2.59:142,3,0	0/0:6,0:9:2.92:0,3,17	./.	0/0:23,0:16:2.59:0,3,10	1/1:9,0:17:2.97:142,3,0	1/1:21,0:20:3.01:98,3,0	1/1:33,0:33:4.87:311,5,0	0/1:33,0:34:48.15:88,0,48	0/0:13,0:24:19.13:0,19,501	1/1:32,0:30:31.83:894,32,0	1/1:14,0:12:6.02:260,6,0	1/1:15,13:30:9.03:490,9,0	1/1:11,6:19:12.04:724,12,0	0/0:20,0:20:1.34:0,1,5	1/1:21,12:34:5.30:341,5,0	1/1:16,0:28:12.04:509,12,0	0/0:8,0:19:3.33:0,3,31	1/1:25,0:24:27.31:568,27,0	1/1:24,0:23:10.85:405,11,0	1/1:11,0:10:3.01:139,3,0	1/1:50,0:55:12.84:297,13,0	1/1:15,1:29:3.01:142,3,0	1/1:11,0:11:5.99:87,6,0	1/1:30,9:40:3.15:200,3,0	1/1:10,0:16:1.75:198,2,0	1/1:34,0:33:57.19:1936,57,0	1/1:13,4:19:9.03:595,9,0	1/1:16,1:15:17.95:479,18,0
chr10	62528975	.	CAGTT	C	951.44	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.981;DP=645;FS=0.000;HRun=0;HaplotypeScore=114.7777;InbreedingCoeff=0.9631;MQ=85.90;MQ0=1;MQRankSum=-3.678;QD=50.08;ReadPosRankSum=1.790;VQSLOD=4.4050;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:56:99:0,160,4325	0/0:13,0:13:39.13:0,39,1066	0/0:19,0:19:45.12:0,45,1160	0/0:25,0:24:63.19:0,63,1590	0/0:26,0:26:75.26:0,75,2042	0/0:19,0:19:57.18:0,57,1504	0/0:34,0:34:99:0,102,2694	0/0:30,0:30:87.30:0,87,2373	1/1:0,19:19:54.19:1046,54,0	0/0:21,0:21:63.22:0,63,1717	0/0:22,0:22:66.17:0,66,1678	0/0:18,0:18:51.18:0,51,1397	0/0:21,0:21:60.21:0,60,1603	0/0:18,0:18:54.17:0,54,1384	0/0:24,0:24:72.25:0,72,1942	0/0:22,1:23:11.07:0,11,1750	0/0:25,0:25:75.26:0,75,2027	0/0:24,0:24:66.23:0,66,1771	0/0:15,0:14:42.14:0,42,1086	0/0:12,0:12:33.11:0,33,896	0/0:22,0:22:63.22:0,63,1725	0/0:31,0:31:90.31:0,90,2463	0/0:26,0:25:69.24:0,69,1890	0/0:19,0:19:57.20:0,57,1549	0/0:12,0:12:33.11:0,33,904	0/0:22,0:22:60.21:0,60,1634	0/0:25,0:25:75.26:0,75,1989	0/0:24,0:24:72.25:0,72,1931
chr10	62529073	.	AT	A	451.91	PASS	AB=0.900;AC=3;AF=0.054;AN=56;BaseQRankSum=5.946;DP=585;FS=0.783;HRun=9;HaplotypeScore=75.5808;InbreedingCoeff=0.7206;MQ=73.27;MQ0=0;MQRankSum=-4.801;QD=15.06;ReadPosRankSum=-0.013;VQSLOD=3.8234;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,1:44:95.79:0,96,1298	0/1:8,1:9:3.45:3,0,203	0/0:16,0:16:16.11:0,16,311	0/0:14,0:13:21.93:0,22,225	0/0:19,0:19:57.14:0,57,637	0/0:25,0:25:63.19:0,63,727	0/0:23,0:23:66.18:0,66,752	0/0:31,0:31:78.19:0,78,864	1/1:1,19:21:62.02:546,62,0	0/0:33,0:33:87.26:0,87,1004	0/0:23,0:23:69.20:0,69,796	0/0:18,0:18:54.14:0,54,607	0/0:17,0:17:48.13:0,48,545	0/0:19,0:19:54.15:0,54,616	0/0:25,0:25:69.19:0,69,787	0/0:11,0:11:33.10:0,33,381	0/0:23,0:23:66.13:0,66,722	0/0:20,0:20:60.18:0,60,692	0/0:29,0:30:72.03:0,72,802	0/0:18,0:18:51.15:0,51,588	0/0:10,0:10:24.54:0,25,278	0/0:15,0:15:42.12:0,42,477	0/0:22,0:22:63.18:0,63,717	0/0:15,0:15:42.12:0,42,485	0/0:20,0:20:54.12:0,54,591	0/0:20,0:20:45.11:0,45,501	0/0:33,0:32:99:0,99,1125	0/0:11,0:11:30.03:0,30,319
chr10	62529101	.	T	TCC	1066.05	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.044;DP=582;FS=0.807;HRun=6;HaplotypeScore=79.4829;InbreedingCoeff=0.9984;MQ=76.84;MQ0=0;MQRankSum=-5.211;QD=44.42;ReadPosRankSum=0.793;VQSLOD=2.7864;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,99,1154	0/0:10,0:10:30.05:0,30,348	0/0:18,0:17:32.66:0,33,364	0/0:23,0:21:50.86:0,51,575	0/0:19,0:19:48.09:0,48,558	0/0:25,0:25:72.23:0,72,877	0/0:21,0:21:57.17:0,57,695	0/0:29,0:29:72.17:0,72,861	1/1:3,21:24:69.24:1161,69,0	0/0:30,0:30:81.22:0,81,967	0/0:17,0:17:48.13:0,48,573	0/0:16,0:16:45.14:0,45,547	0/0:13,0:13:39.12:0,39,475	0/0:19,0:19:45.13:0,45,549	0/0:24,0:24:60.16:0,60,720	0/0:12,0:12:36.11:0,36,439	0/0:28,0:28:75.23:0,75,915	0/0:21,0:21:57.17:0,57,695	0/0:25,0:25:69.21:0,69,840	0/0:21,0:21:63.20:0,63,767	0/0:14,0:14:39.12:0,39,474	0/0:17,0:17:48.14:0,48,575	0/0:23,0:23:57.17:0,57,695	0/0:17,0:17:51.16:0,51,621	0/0:19,0:19:54.16:0,54,658	0/0:20,0:20:60.19:0,60,732	0/0:30,0:29:84.26:0,84,1024	0/0:11,0:11:30.09:0,30,363
chr10	62530158	.	C	CT	724.01	PASS	AB=0.964;AC=27;AF=0.482;AN=56;BaseQRankSum=-1.027;DP=333;FS=11.267;HRun=0;HaplotypeScore=73.9617;InbreedingCoeff=0.1014;MQ=65.79;MQ0=1;MQRankSum=1.241;QD=3.28;ReadPosRankSum=-4.756;VQSLOD=0.4848;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:15,0:15:29.30:55,0,29	1/1:1,0:1:0.47:1,0,0	0/0:22,0:8:0.43:0,0,56	0/0:28,0:16:9.20:0,9,239	1/1:3,0:3:2.44:24,2,0	0/1:19,0:19:15.70:30,0,16	1/1:15,0:15:2.39:50,2,0	0/0:19,0:18:8.83:0,9,65	0/1:4,8:11:24.75:183,0,25	1/1:16,0:16:16.66:157,17,0	0/1:6,0:6:0.02:18,0,0	1/1:9,0:8:0.42:20,0,0	0/1:13,0:13:12.21:12,0,13	0/1:11,0:11:26.26:29,0,26	0/1:9,0:9:1.41:16,0,1	0/0:17,0:17:2.95:0,3,23	0/0:8,0:8:11.05:0,11,115	0/1:16,0:16:12.02:12,0,16	1/1:18,0:18:19.14:89,19,0	0/1:3,0:3:0.04:0,0,0	0/1:25,0:25:3.85:71,0,4	0/0:4,0:4:2.87:0,3,15	0/0:3,0:3:8.35:0,8,45	0/0:9,0:9:23.21:0,23,134	1/1:4,0:4:0.62:21,1,0	1/1:17,0:17:10.54:68,11,0	0/1:9,0:9:2.94:16,0,3	0/0:1,0:1:0.89:0,1,2
chr10	62530488	.	GTCC	G	4267.34	PASS	AB=1.000;AC=38;AF=0.704;AN=54;BaseQRankSum=6.955;DP=446;FS=4.513;HRun=0;HaplotypeScore=61.4564;InbreedingCoeff=0.6904;MQ=58.72;MQ0=11;MQRankSum=3.016;QD=14.47;ReadPosRankSum=0.192;VQSLOD=4.0163;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:1.08:0,1,1355	0/1:7,0:6:22.71:23,0,78	./.	0/1:28,0:13:3.07:3,0,13	0/0:15,0:14:18.06:0,18,326	1/1:4,12:16:21.07:288,21,0	1/1:6,16:22:24.08:330,24,0	1/1:21,4:22:5.15:63,5,0	0/0:5,0:5:9.02:0,9,112	1/1:9,7:16:21.07:287,21,0	1/1:3,3:6:6.02:82,6,0	1/1:6,5:11:12.04:160,12,0	1/1:3,8:11:15.05:206,15,0	1/1:4,8:12:18.06:247,18,0	1/1:0,10:11:24.05:309,24,0	1/1:1,6:7:18.06:247,18,0	0/0:22,0:22:9.03:0,9,104	1/1:9,9:18:18.06:247,18,0	1/1:13,11:22:22.51:439,23,0	1/1:5,6:10:18.01:220,18,0	1/1:9,15:24:21.07:288,21,0	0/0:1,0:1:3:0,3,26	0/0:6,0:6:9.03:0,9,178	0/0:29,0:29:54.19:0,54,1016	1/1:5,10:15:24.08:329,24,0	1/1:1,0:8:20.23:133,20,0	1/1:3,10:13:21.07:288,21,0	1/1:3,0:10:11.73:76,12,0
chr10	62530512	.	C	CTCCTCT	990.83	PASS	AB=1.000;AC=10;AF=0.179;AN=56;BaseQRankSum=-2.782;DP=469;FS=1.336;HRun=0;HaplotypeScore=100.4597;InbreedingCoeff=0.4981;MQ=61.79;MQ0=11;MQRankSum=-2.142;QD=9.01;ReadPosRankSum=-2.964;VQSLOD=1.7213;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:51.89:0,52,1923	1/1:1,4:5:11.99:282,12,0	0/0:30,0:8:14.61:0,15,137	0/0:24,0:12:11.23:0,11,155	0/0:12,0:10:24.06:0,24,417	0/0:18,0:18:30.06:0,30,377	0/0:23,0:23:39.02:0,39,463	1/1:29,0:26:56.06:522,56,0	0/1:8,0:8:23.97:24,0,95	0/0:10,0:10:30.08:0,30,381	0/0:8,0:7:9.02:0,9,113	0/1:12,0:12:12.74:13,0,207	0/0:11,0:11:24.03:0,24,292	0/0:13,0:13:32.27:0,32,371	0/0:15,0:15:36.03:0,36,443	0/0:11,0:11:29.97:0,30,353	1/1:6,20:29:11.98:272,12,0	0/0:16,0:16:39.87:0,40,399	0/0:24,0:22:15.69:0,16,577	0/1:11,0:10:28.72:29,0,218	0/0:24,0:24:24.57:0,25,415	0/0:4,0:4:12:0,12,107	0/0:6,0:6:18.03:0,18,286	0/0:25,0:25:49.13:0,49,1159	0/0:15,0:15:27.08:0,27,370	0/0:12,0:12:18.63:0,19,285	0/1:16,0:16:2.26:2,0,359	0/0:9,0:9:15.01:0,15,185
chr10	62531640	.	T	TA	1363.09	PASS	AB=0.780;AC=16;AF=0.286;AN=56;BaseQRankSum=-0.388;DP=621;FS=0.000;HRun=15;HaplotypeScore=86.4401;InbreedingCoeff=-0.0525;MQ=65.54;MQ0=1;MQRankSum=1.091;QD=4.37;ReadPosRankSum=-1.744;VQSLOD=1.1798;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:13,24:41:9.16:257,0,9	0/1:4,6:11:27.28:99,0,27	0/0:23,0:11:8.40:0,8,43	0/0:20,0:15:8.76:0,9,51	0/1:9,12:21:2.94:178,0,3	0/1:22,3:26:15.52:16,0,239	0/1:16,4:20:11.46:11,0,149	1/1:19,11:30:12.71:188,13,0	0/0:14,0:16:23.13:0,23,159	0/0:27,1:30:29.15:0,29,244	0/0:19,0:19:39.39:0,39,227	0/0:20,0:22:19.84:0,20,185	0/1:19,0:19:22.03:22,0,104	0/1:12,2:17:6.33:6,0,112	0/0:30,2:32:36.91:0,37,330	0/0:17,1:18:12.27:0,12,178	0/1:14,9:24:28.92:236,0,29	0/0:20,2:25:3.64:0,4,206	0/0:13,0:15:1.03:0,1,77	0/1:20,1:24:5.68:6,0,166	0/0:20,0:21:8.78:0,9,145	1/1:8,11:20:8.28:149,8,0	0/1:13,6:20:31.14:163,0,31	0/1:12,7:19:78.56:157,0,79	0/0:12,0:15:17.77:0,18,98	0/0:22,1:25:14.15:0,14,208	0/1:15,5:20:34.71:35,0,120	0/0:25,0:26:41.28:0,41,240
chr10	62531770	.	AAAGGAAGG	A	7423.99	PASS	AB=0.656;AC=38;AF=0.731;AN=52;BaseQRankSum=5.575;DP=658;FS=35.835;HRun=0;HaplotypeScore=153.0740;InbreedingCoeff=0.7116;MQ=60.35;MQ0=10;MQRankSum=-5.069;QD=15.66;ReadPosRankSum=1.265;VQSLOD=2.7607;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:23,22:46:27.01:545,27,0	0/0:6,0:13:9.03:0,9,267	./.	./.	1/1:9,11:20:17.97:304,18,0	1/1:12,8:20:15.05:362,15,0	1/1:20,16:37:17.95:500,18,0	0/0:20,0:19:20.35:0,20,476	1/1:7,11:19:12.04:280,12,0	1/1:15,16:31:48.07:852,48,0	1/1:4,4:9:8.94:96,9,0	1/1:6,15:21:18.06:449,18,0	1/1:16,5:21:21.07:520,21,0	0/1:12,0:21:47.88:48,0,168	1/1:12,14:26:27.06:619,27,0	0/1:7,11:19:97.80:446,0,98	0/0:19,0:30:24.97:0,25,728	1/1:18,8:25:5.92:150,6,0	1/1:16,4:19:12.01:191,12,0	1/1:8,12:21:14.96:228,15,0	1/1:21,13:34:8.04:183,8,0	0/0:20,0:20:42.14:0,42,1528	0/0:16,0:15:27.07:0,27,679	0/0:27,0:27:45.15:0,45,1710	1/1:12,9:21:14.96:264,15,0	1/1:16,10:26:33.08:711,33,0	1/1:8,15:23:21.54:525,22,0	1/1:12,1:13:6.02:150,6,0
chr10	62533160	.	T	TA	1775.29	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-8.861;DP=632;FS=0.506;HRun=7;HaplotypeScore=67.1895;InbreedingCoeff=0.9513;MQ=67.14;MQ0=0;MQRankSum=0.994;QD=25.73;ReadPosRankSum=-2.139;VQSLOD=3.3266;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:94.95:0,95,897	1/1:1,14:15:35.91:433,36,0	0/0:29,0:24:58.61:0,59,531	0/0:31,0:25:4.68:0,5,364	0/0:35,0:35:99:0,105,1014	0/0:20,0:20:54.08:0,54,521	0/0:25,0:25:36.42:0,36,449	1/1:3,21:24:63.19:760,63,0	0/0:19,0:19:54.09:0,54,521	0/0:27,0:27:78.06:0,78,741	0/0:18,0:18:42.06:0,42,405	0/0:16,0:16:42.06:0,42,405	0/0:20,0:20:54.08:0,54,521	0/0:15,0:15:36.05:0,36,347	0/0:22,0:22:60.09:0,60,579	0/0:23,0:23:66.10:0,66,637	1/1:5,25:30:60.18:725,60,0	0/0:18,1:19:17.84:0,18,456	0/0:28,0:28:63.09:0,63,608	0/0:29,0:29:84.10:0,84,798	0/0:17,0:17:39.06:0,39,377	0/0:22,0:22:51.06:0,51,486	0/0:19,0:19:51.08:0,51,492	0/0:15,0:15:39.06:0,39,376	0/0:17,0:17:45.05:0,45,428	0/0:22,0:22:57.08:0,57,547	0/0:22,0:21:60.09:0,60,579	0/0:15,0:15:45.06:0,45,428
chr10	62533421	.	A	ACC	6144.87	PASS	AB=0.983;AC=18;AF=0.321;AN=56;BaseQRankSum=14.995;DP=812;FS=9.901;HRun=2;HaplotypeScore=123.8365;InbreedingCoeff=-0.2426;MQ=70.22;MQ0=6;MQRankSum=-0.400;QD=13.39;ReadPosRankSum=9.541;VQSLOD=0.5558;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,126,1606	0/0:14,0:14:42.09:0,42,536	0/0:51,0:36:65.02:0,65,953	0/0:51,0:32:58.85:0,59,660	0/0:16,0:16:42.08:0,42,538	0/1:12,0:12:21.96:136,0,22	0/1:21,1:22:45.88:293,0,46	0/0:30,0:29:87.17:0,87,1043	0/0:34,0:34:99:0,99,1339	0/1:31,0:31:99:318,0,196	0/1:15,1:16:38.91:193,0,39	0/1:25,0:25:55.03:353,0,55	0/1:27,0:27:99:256,0,174	1/1:24,0:21:29.99:404,30,0	0/1:30,0:31:51.90:366,0,52	0/1:35,0:35:99:479,0,121	0/0:42,0:42:99:0,117,1598	0/1:23,0:24:55.58:256,0,56	0/1:25,0:24:99:271,0,116	0/1:20,0:20:63.80:259,0,64	0/1:74,3:77:1.21:1206,0,1	0/0:21,0:21:56.82:0,57,657	0/0:10,0:10:24.05:0,24,311	0/0:33,0:33:93.12:0,93,1121	0/1:29,0:29:63.54:442,0,64	0/1:21,2:23:40.05:377,0,40	0/1:22,0:22:7.88:304,0,8	0/1:15,1:16:94.87:233,0,95
chr10	62533422	.	C	CCA	14146.10	PASS	AB=0.640;AC=33;AF=0.589;AN=56;BaseQRankSum=-14.728;DP=826;FS=20.057;HRun=0;HaplotypeScore=98.6246;InbreedingCoeff=0.9011;MQ=70.11;MQ0=6;MQRankSum=2.573;QD=30.03;ReadPosRankSum=4.678;VQSLOD=4.8211;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:50:99:0,105,1203	0/0:14,0:14:33.07:0,33,375	0/0:55,0:39:44.34:0,44,544	0/0:48,1:31:23.78:0,24,349	0/0:15,0:16:32.94:0,33,381	1/1:2,10:12:21.07:329,21,0	1/1:7,15:22:39.11:631,39,0	0/0:29,0:29:50.98:0,51,591	0/0:34,0:34:87.27:0,87,1059	1/1:10,21:31:38.12:962,38,0	1/1:9,8:17:27.08:405,27,0	1/1:8,17:26:17.52:791,18,0	1/1:11,18:29:5.60:596,6,0	1/1:4,20:22:51.17:826,51,0	1/1:9,22:32:54.18:873,54,0	1/1:9,28:37:38.75:1132,39,0	0/0:42,0:42:96.30:0,96,1173	1/1:6,18:25:5.48:591,5,0	1/1:9,16:25:54.09:793,54,0	1/1:7,14:21:39.13:633,39,0	1/1:14,61:77:99:2627,146,0	0/0:21,0:21:36.11:0,36,440	0/0:10,0:10:21.04:0,21,233	0/0:33,0:33:66.01:0,66,758	1/1:6,23:29:7.03:960,7,0	1/1:6,17:23:57.16:896,57,0	1/1:6,17:23:20.80:655,21,0	0/1:7,9:16:3.56:448,0,4
chr10	62534243	.	TAC	T	1052.03	PASS	AB=0.899;AC=20;AF=0.385;AN=52;BaseQRankSum=3.135;DP=546;FS=4.554;HRun=0;HaplotypeScore=90.9109;InbreedingCoeff=-0.2638;MQ=56.22;MQ0=14;MQRankSum=1.088;QD=3.17;ReadPosRankSum=2.545;VQSLOD=1.8994;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:37,3:40:99:102,0,408	0/0:10,0:13:15:0,15,147	./.	./.	0/1:13,2:15:14.59:15,0,163	0/0:14,0:14:17.07:0,17,243	0/1:19,3:22:17.58:18,0,164	0/0:18,0:18:4.53:0,5,25	0/0:9,0:19:26.70:0,27,240	0/1:20,0:20:12.06:12,0,205	0/1:7,1:8:20.58:21,0,122	0/0:20,1:21:0.49:0,0,386	0/1:16,2:18:44.12:44,0,180	0/0:13,0:14:10.41:0,10,256	0/1:13,2:15:14.03:14,0,180	0/1:10,1:12:17.60:18,0,144	0/0:22,1:26:9.64:0,10,375	0/1:13,5:18:99:186,0,205	0/1:13,2:15:68.42:68,0,140	0/0:19,1:19:23.83:0,24,316	0/1:21,1:22:30.26:30,0,268	1/1:15,5:23:38.17:283,38,0	1/1:11,6:15:18.04:192,18,0	0/1:18,9:29:2.73:161,0,3	0/1:17,5:21:29.16:29,0,386	0/1:14,0:14:10.55:11,0,104	0/1:13,0:13:1.56:2,0,141	0/1:9,0:9:3.17:3,0,103
chr10	62535121	.	A	AT	11438.63	PASS	AB=0.620;AC=50;AF=0.893;AN=56;BaseQRankSum=-5.539;DP=679;FS=0.776;HRun=12;HaplotypeScore=76.7804;InbreedingCoeff=0.5427;MQ=70.53;MQ0=1;MQRankSum=-2.001;QD=17.46;ReadPosRankSum=1.169;VQSLOD=5.8828;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:17,37:54:99:1249,116,0	1/1:2,8:10:21.02:198,21,0	0/0:12,0:11:7.70:0,8,81	0/0:12,0:10:5.10:0,5,59	0/1:11,12:24:22.32:233,0,22	1/1:5,21:25:45.07:438,45,0	0/1:9,19:29:2.89:434,0,3	1/1:11,25:38:9.43:615,9,0	1/1:6,11:17:14.09:286,14,0	1/1:5,30:35:87.09:825,87,0	1/1:4,10:15:20.77:170,21,0	1/1:5,17:22:20.06:344,20,0	1/1:4,15:20:27.77:250,28,0	1/1:3,22:25:41.59:407,42,0	1/1:3,27:30:63.57:614,64,0	1/1:5,15:20:34.70:326,35,0	1/1:8,33:43:61.90:736,62,0	1/1:6,16:22:42.02:398,42,0	1/1:5,13:18:36.06:350,36,0	1/1:1,23:24:60:563,60,0	1/1:5,23:27:33.29:526,33,0	1/1:5,16:21:29.98:292,30,0	1/1:4,14:18:29.97:279,30,0	1/1:3,31:35:74.96:715,75,0	1/1:2,15:17:23.54:309,24,0	1/1:7,16:23:33.03:314,33,0	1/1:10,22:33:34.04:451,34,0	1/1:3,5:8:12.02:117,12,0
chr10	62536830	.	TGTGTGTGTGTGC	T	1174.93	PASS	AB=1.000;AC=20;AF=0.400;AN=50;BaseQRankSum=-1.325;DP=571;FS=1.963;HRun=0;HaplotypeScore=155.6548;InbreedingCoeff=-0.2041;MQ=40.61;MQ0=23;MQRankSum=-2.700;QD=3.55;ReadPosRankSum=-4.281;VQSLOD=1.2631;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:44:13.92:0,14,1283	1/1:4,3:6:15.04:345,15,0	./.	./.	0/1:19,0:19:15.25:15,0,473	0/1:17,0:17:4.34:50,0,4	0/0:12,0:10:4.21:0,4,196	1/1:21,0:18:32.80:206,33,0	0/0:15,0:15:18.93:0,19,654	0/1:23,0:23:47.04:47,0,397	./.	0/1:18,0:18:32.42:32,0,65	0/1:15,0:15:76.33:113,0,76	0/1:15,0:14:36.97:38,0,37	0/1:19,0:19:6.38:6,0,15	0/0:14,0:13:5:0,5,47	1/1:9,11:19:16.13:223,16,0	0/0:19,0:18:7.44:0,7,268	0/1:19,0:18:46.18:46,0,158	0/1:19,0:16:19.10:42,0,19	0/0:59,0:55:1.42:0,1,343	0/1:30,0:30:5.93:6,0,135	0/0:14,0:11:5.84:0,6,39	0/1:30,0:29:10.47:10,0,129	0/1:25,0:24:50.97:51,0,303	0/1:23,0:23:40.58:41,0,809	0/0:16,0:16:7.50:0,8,514	0/1:11,0:11:15.15:58,0,15
chr10	62536842	.	CGT	C	149.78	PASS	AB=0.978;AC=7;AF=0.130;AN=54;BaseQRankSum=1.363;DP=524;FS=10.300;HRun=0;HaplotypeScore=106.8247;InbreedingCoeff=0.3471;MQ=40.68;MQ0=21;MQRankSum=-0.406;QD=1.97;ReadPosRankSum=2.256;VQSLOD=1.5610;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:45:51.45:0,51,543	1/1:7,0:6:3.64:15,4,0	0/1:13,0:4:6.93:7,0,33	0/0:14,1:4:8.50:0,8,122	0/0:17,0:17:15.44:0,15,164	0/0:19,0:19:8.38:0,8,85	0/0:14,0:12:12.02:0,12,165	0/0:17,0:15:3.45:0,3,22	1/1:9,7:16:6.72:206,7,0	0/0:17,0:17:24.96:0,25,274	./.	0/0:15,0:15:4.56:0,5,33	0/0:16,0:16:22.20:0,22,181	0/0:15,0:14:8:0,8,78	0/1:19,0:18:27.95:28,0,74	0/0:15,0:14:12:0,12,121	0/1:20,0:19:0.20:9,0,0	0/0:20,0:19:26.85:0,27,303	0/0:9,0:7:9.50:0,10,136	0/0:15,0:12:2:0,2,7	0/0:49,0:44:18.52:0,19,250	0/0:26,0:25:18.51:0,19,228	0/0:14,0:12:11.95:0,12,149	0/0:33,0:32:4.66:0,5,211	0/0:22,0:21:15:0,15,183	0/0:17,0:17:29.30:0,29,396	0/0:15,0:15:29.54:0,30,306	0/0:8,0:8:5.14:0,5,49
chr10	62536862	.	TGC	T	202.37	PASS	AB=0.982;AC=18;AF=0.321;AN=56;BaseQRankSum=4.644;DP=536;FS=2.925;HRun=0;HaplotypeScore=111.2366;InbreedingCoeff=-0.1660;MQ=40.97;MQ0=19;MQRankSum=0.200;QD=0.73;ReadPosRankSum=-1.240;VQSLOD=1.8421;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:40:75.18:0,75,1240	1/1:11,0:10:10.27:60,10,0	0/1:33,0:5:14.22:14,0,74	0/0:33,0:8:20.09:0,20,269	0/0:14,0:14:7.53:0,8,384	0/1:18,0:18:6.38:6,0,66	0/1:18,2:18:7.83:8,0,224	0/0:16,0:13:29.03:0,29,372	0/1:20,0:20:2.33:2,0,227	0/0:15,1:16:4.55:0,5,165	0/0:11,0:11:0.47:0,0,1	0/1:11,1:12:8.44:8,0,102	0/1:15,0:15:18.39:18,0,144	0/1:12,0:11:9.30:9,0,48	0/1:14,1:14:10.40:10,0,80	0/0:14,0:13:8.87:0,9,93	1/1:19,0:18:7.19:75,7,0	0/1:17,0:17:30.29:30,0,271	0/1:9,0:7:25.48:25,0,28	0/1:13,0:12:14.55:15,0,25	0/1:41,1:36:32.38:32,0,53	0/0:29,0:28:5.03:0,5,294	0/0:16,0:16:16.57:0,17,239	0/0:34,1:34:21.35:0,21,484	0/0:16,0:16:5.65:0,6,139	0/0:17,0:17:7.67:0,8,186	0/1:17,0:17:18.35:18,0,290	0/1:4,0:4:12.17:23,0,12
chr10	62536864	.	C	CGT	1518.26	PASS	AB=0.927;AC=27;AF=0.482;AN=56;BaseQRankSum=0.359;DP=573;FS=14.476;HRun=0;HaplotypeScore=118.3188;InbreedingCoeff=-0.0257;MQ=41.91;MQ0=20;MQRankSum=2.504;QD=4.18;ReadPosRankSum=-1.065;VQSLOD=1.7184;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:47:38.97:0,39,495	1/1:13,0:12:2.71:20,3,0	0/0:34,0:5:8.04:0,8,65	0/0:34,0:8:20.88:0,21,178	0/0:12,0:12:19.10:0,19,172	0/1:15,3:18:14.34:108,0,14	0/1:19,2:19:49.18:134,0,49	0/0:15,0:13:5.13:0,5,222	0/1:20,0:21:11.31:11,0,219	0/1:18,1:19:4.82:59,0,5	1/1:9,4:14:3.01:45,3,0	0/1:11,0:11:26.63:102,0,27	0/1:15,0:15:25.58:65,0,26	1/1:12,1:12:11.48:160,11,0	0/1:14,1:14:8.49:122,0,8	1/1:6,8:13:9.03:132,9,0	0/0:10,0:18:6.46:0,6,27	0/1:14,3:18:12.58:252,0,13	1/1:8,1:7:4.26:42,4,0	1/1:15,2:15:6.02:90,6,0	0/1:46,2:41:3.88:4,0,52	0/0:30,0:29:21.60:0,22,196	0/0:16,0:16:12.47:0,12,99	0/1:37,0:37:14.34:14,0,53	0/1:11,8:19:19.08:78,0,19	0/1:18,0:18:26.79:71,0,27	0/1:15,2:17:44.67:137,0,45	1/1:4,0:4:5.85:44,6,0
chr10	62536879	.	C	CTG	2718.79	PASS	AB=0.916;AC=33;AF=0.611;AN=54;BaseQRankSum=-2.957;DP=644;FS=1.409;HRun=0;HaplotypeScore=123.3093;InbreedingCoeff=-0.1716;MQ=45.63;MQ0=25;MQRankSum=1.897;QD=5.48;ReadPosRankSum=0.093;VQSLOD=3.3062;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:31,25:52:99:416,0,191	0/0:5,0:14:0.35:0,0,1	./.	0/0:48,0:11:5.60:0,6,41	0/1:9,7:17:32.39:171,0,32	0/1:20,0:20:13.88:108,0,14	0/1:21,0:20:48.84:134,0,49	1/1:15,0:12:2.98:22,3,0	0/0:7,0:21:9.89:0,10,62	0/1:19,0:19:11.49:64,0,11	1/1:10,0:10:3.01:45,3,0	0/1:17,0:16:26.34:98,0,26	0/1:15,0:15:22.88:69,0,23	1/1:17,0:16:12.98:163,13,0	0/1:19,0:18:5.57:143,0,6	1/1:16,0:15:10.28:135,10,0	0/0:13,0:19:6.30:0,6,25	0/1:17,0:18:7.92:253,0,8	1/1:6,0:6:3.01:39,3,0	1/1:16,0:14:6.02:90,6,0	0/1:69,0:64:26.28:26,0,53	1/1:20,0:22:16.80:134,17,0	0/1:7,0:22:8.59:90,0,9	1/1:17,3:41:35.40:345,35,0	0/1:23,0:23:19.13:78,0,19	1/1:15,0:15:14.35:109,14,0	0/1:19,0:19:44.35:113,0,44	1/1:2,0:2:3.01:31,3,0
chr10	62538948	.	T	TA	697.34	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-6.155;DP=694;FS=2.872;HRun=6;HaplotypeScore=66.5994;InbreedingCoeff=0.9905;MQ=78.81;MQ0=0;MQRankSum=-1.608;QD=29.06;ReadPosRankSum=1.351;VQSLOD=4.4927;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:50:99:0,141,1420	0/0:7,0:7:18.04:0,18,183	0/0:16,0:16:38.71:0,39,394	0/0:20,0:20:45.10:0,45,459	0/0:27,0:27:75.10:0,75,741	0/0:21,0:21:63.13:0,63,635	0/0:23,0:23:63.14:0,63,643	0/0:30,0:30:72.15:0,72,730	1/1:3,21:24:63.20:792,63,0	0/0:25,0:25:69.14:0,69,695	0/0:20,0:20:57.08:0,57,560	0/0:21,0:21:60.14:0,60,612	0/0:21,0:21:60.13:0,60,611	0/0:34,0:34:96.16:0,96,962	0/0:24,0:24:69.13:0,69,693	0/0:24,1:25:31.41:0,31,635	0/0:28,0:28:84.17:0,84,849	0/0:21,0:21:60.14:0,60,612	0/0:28,0:28:81.13:0,81,807	0/0:20,0:20:60.11:0,60,600	0/0:25,0:25:66.12:0,66,661	0/0:20,0:20:54.12:0,54,551	0/0:30,0:30:87.20:0,87,887	0/0:29,0:28:81.18:0,81,826	0/0:27,0:27:81.14:0,81,810	0/0:33,0:33:90.20:0,90,913	0/0:35,0:35:99:0,99,962	0/0:9,0:9:26.89:0,27,228
chr10	62539511	.	AGT	A	431.01	PASS	AB=0.921;AC=15;AF=0.313;AN=48;BaseQRankSum=2.342;DP=574;FS=4.584;HRun=0;HaplotypeScore=89.6009;InbreedingCoeff=0.1793;MQ=50.90;MQ0=21;MQRankSum=2.116;QD=2.04;ReadPosRankSum=1.603;VQSLOD=1.5576;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:38:3:0,3,34	./.	./.	./.	./.	0/0:19,0:19:21.06:0,21,292	0/0:13,0:12:12.04:0,12,174	0/1:33,0:32:7.59:14,0,8	0/0:12,0:13:15:0,15,136	0/0:19,0:18:11.02:0,11,268	0/0:13,0:12:3.01:0,3,45	1/1:11,0:11:2.84:14,3,0	0/1:9,1:10:10.98:27,0,11	0/0:22,0:21:23.75:0,24,267	0/1:9,4:13:35.80:57,0,36	0/1:12,1:11:21.45:21,0,146	0/1:25,0:28:23.31:23,0,33	0/1:19,0:19:7.93:8,0,205	0/0:23,0:24:17.26:0,17,204	0/0:12,0:12:6.49:0,6,83	0/0:48,0:47:28.27:0,28,443	1/1:18,4:20:12.50:132,13,0	1/1:10,0:9:3.89:31,4,0	1/1:17,17:35:20.34:231,20,0	0/1:16,1:16:23.89:24,0,207	0/0:20,0:19:10.15:0,10,161	0/0:8,0:8:12.51:0,13,176	0/0:11,0:8:6.02:0,6,84
chr10	62539575	.	TAG	T	721.62	PASS	AB=0.941;AC=19;AF=0.352;AN=54;BaseQRankSum=4.717;DP=437;FS=3.496;HRun=0;HaplotypeScore=92.7818;InbreedingCoeff=-0.1187;MQ=40.82;MQ0=48;MQRankSum=-2.517;QD=2.66;ReadPosRankSum=-1.759;VQSLOD=1.6587;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,2:22:6.49:0,6,59	0/0:2,2:3:0.47:0,0,1	0/0:25,0:2:5.71:0,6,31	0/0:27,0:4:11.98:0,12,112	1/1:13,1:14:6.02:78,6,0	0/1:15,0:11:37.94:38,0,121	0/0:15,0:14:21.74:0,22,275	1/1:1,5:5:15.01:182,15,0	0/1:8,0:7:2.68:3,0,122	0/1:11,2:9:94.54:95,0,95	0/0:5,3:8:3.01:0,3,50	0/1:6,0:5:19.17:28,0,19	0/1:9,0:8:20.14:20,0,97	0/1:18,0:17:53.08:53,0,278	0/1:20,0:17:42.89:43,0,92	0/1:11,1:10:78.94:79,0,132	1/1:11,7:14:16.70:115,17,0	0/1:9,6:15:10.53:11,0,297	0/0:11,1:7:17.95:0,18,248	0/0:15,0:13:18.06:0,18,274	0/1:46,4:46:22.09:22,0,515	0/0:9,1:6:5.88:0,6,82	0/0:12,0:11:14.72:0,15,213	0/1:27,3:27:51.74:52,0,302	0/0:10,1:10:20.80:0,21,305	0/1:16,0:12:46.59:47,0,331	0/1:19,0:16:18.21:18,0,175	./.
chr10	62539577	.	GGTGTGTGTGTGTGT	G	1774.93	PASS	AB=0.970;AC=25;AF=0.568;AN=44;BaseQRankSum=-2.386;DP=439;FS=15.199;HRun=0;HaplotypeScore=129.5288;InbreedingCoeff=0.1440;MQ=40.57;MQ0=50;MQRankSum=1.687;QD=6.43;ReadPosRankSum=-0.362;VQSLOD=1.6299;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:22:5.49:0,5,64	./.	./.	0/1:25,0:4:0:0,0,0	0/1:12,0:14:15.90:121,0,16	1/1:14,0:10:1.61:46,2,0	./.	./.	0/0:10,0:8:3.48:0,3,56	0/1:14,0:10:23.89:216,0,24	./.	1/1:4,3:5:3.01:113,3,0	1/1:7,2:8:3.01:114,3,0	1/1:18,0:17:5.65:171,6,0	0/1:20,0:17:0.88:103,0,1	1/1:8,1:10:8.95:237,9,0	0/1:19,0:14:31.96:32,0,65	1/1:14,0:14:6.02:188,6,0	0/0:11,0:6:0:0,0,0	0/0:9,6:13:3.30:0,3,101	0/1:53,0:48:50.68:114,0,51	0/1:10,0:7:0:0,0,0	1/1:9,0:11:0.36:1,0,0	0/0:31,0:28:6.49:0,6,84	0/0:11,0:10:0:0,0,0	1/1:12,3:12:8.99:206,9,0	1/1:10,9:16:5.47:233,5,0	./.
chr10	62542101	.	T	TC	318.22	PASS	AB=0.927;AC=5;AF=0.089;AN=56;BaseQRankSum=7.381;DP=617;FS=5.372;HRun=0;HaplotypeScore=89.6435;InbreedingCoeff=0.2073;MQ=44.57;MQ0=26;MQRankSum=-4.928;QD=3.12;ReadPosRankSum=0.395;VQSLOD=2.6160;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:39:99:0,100,656	0/1:9,2:11:19.17:106,0,19	1/1:23,0:3:2.04:5,2,0	0/0:30,0:5:0.62:0,1,4	0/0:35,0:34:78.37:0,78,482	0/0:13,0:12:31.96:0,32,253	0/0:24,0:24:45.89:0,46,375	0/1:39,0:32:99:202,0,144	0/0:14,0:13:30.36:0,30,200	0/0:25,0:25:58.25:0,58,498	0/0:18,0:17:31.83:0,32,239	0/0:18,0:17:43.85:0,44,318	0/0:12,0:10:23.66:0,24,190	0/0:12,0:12:29.87:0,30,244	0/0:21,0:21:37.52:0,38,276	0/0:16,0:16:44.44:0,44,369	0/1:27,2:28:99:109,0,158	0/0:26,0:24:53.77:0,54,429	0/0:19,0:17:46.84:0,47,353	0/0:40,0:38:87.96:0,88,668	0/0:13,0:13:29.67:0,30,236	0/0:11,0:11:26.89:0,27,182	0/0:23,0:22:57.69:0,58,377	0/0:21,0:20:45.10:0,45,314	0/0:21,0:20:43.26:0,43,331	0/0:29,0:28:66.64:0,67,538	0/0:25,0:22:53.68:0,54,423	0/0:7,0:7:17.94:0,18,148
chr10	62543359	.	TCAGTCCC	T	16422.34	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=4.018;DP=548;FS=5.705;HRun=0;HaplotypeScore=137.0339;InbreedingCoeff=0.8373;MQ=64.74;MQ0=0;MQRankSum=-6.945;QD=32.39;ReadPosRankSum=5.239;VQSLOD=4.1680;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,20:34:36.04:708,36,0	1/1:2,3:5:3.01:71,3,0	0/0:21,0:20:33.11:0,33,950	0/0:20,0:20:33.10:0,33,902	1/1:3,17:20:38.77:479,39,0	1/1:3,16:19:30.10:668,30,0	1/1:3,19:22:36.12:852,36,0	1/1:11,16:27:45.10:841,45,0	1/1:6,15:21:30.10:697,30,0	1/1:3,17:20:48.15:1070,48,0	1/1:2,6:8:18.06:330,18,0	1/1:2,20:22:39.13:906,39,0	1/1:5,14:19:29.85:601,30,0	1/1:8,16:24:51.17:1135,51,0	1/1:0,16:16:39.13:909,39,0	1/1:2,10:12:24.08:555,24,0	1/1:8,30:38:33:662,33,0	1/1:3,14:17:24.04:518,24,0	1/1:9,8:17:24.06:481,24,0	1/1:3,14:17:39.09:760,39,0	1/1:11,18:29:8.98:146,9,0	1/1:4,14:18:36.04:684,36,0	1/1:7,17:24:32.25:605,32,0	1/1:3,17:20:26.86:604,27,0	1/1:3,14:17:24.04:504,24,0	1/1:4,17:21:51.16:1066,51,0	1/1:3,14:17:18.06:426,18,0	1/1:0,3:3:6.02:142,6,0
chr10	62543785	.	CT	C	296.07	PASS	AB=0.913;AC=3;AF=0.054;AN=56;BaseQRankSum=4.300;DP=587;FS=0.000;HRun=10;HaplotypeScore=60.7522;InbreedingCoeff=0.6776;MQ=72.13;MQ0=0;MQRankSum=0.299;QD=6.73;ReadPosRankSum=0.264;VQSLOD=1.2050;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:78.18:0,78,841	0/0:11,0:11:33.08:0,33,358	0/0:14,1:14:8.22:0,8,277	0/0:11,0:10:10.58:0,11,101	0/0:29,0:29:76.45:0,76,831	0/0:15,1:16:16.05:0,16,397	0/0:12,0:12:33.09:0,33,364	0/0:35,0:34:75.08:0,75,764	1/1:6,17:23:44.97:390,45,0	0/0:28,0:28:72.19:0,72,790	0/0:15,0:15:13.13:0,13,369	0/0:14,0:14:36.08:0,36,389	0/0:18,0:18:45.12:0,45,498	0/0:21,0:22:59.98:0,60,634	0/0:13,1:14:16.06:0,16,405	0/0:24,1:26:39.96:0,40,652	0/0:20,0:20:48.07:0,48,500	0/0:24,1:25:60.14:0,60,653	0/1:18,2:21:1.17:1,0,410	0/0:22,0:22:51.12:0,51,548	0/0:13,0:13:36.10:0,36,398	0/0:24,1:25:43.11:0,43,692	0/0:20,0:20:52.02:0,52,559	0/0:18,0:18:22.25:0,22,472	0/0:18,0:18:51.14:0,51,562	0/0:30,0:34:99:0,99,1031	0/0:33,0:33:59.56:0,60,872	0/0:18,0:18:48.13:0,48,530
chr10	62545113	.	A	AGCTC	3080.85	PASS	AB=0.989;AC=36;AF=0.643;AN=56;BaseQRankSum=-2.879;DP=531;FS=10.434;HRun=0;HaplotypeScore=96.1073;InbreedingCoeff=0.2902;MQ=68.41;MQ0=12;MQRankSum=3.726;QD=8.09;ReadPosRankSum=1.797;VQSLOD=1.2023;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:23:48.35:48,0,251	0/0:10,0:10:15.45:0,15,125	0/0:25,0:8:10.26:0,10,158	0/0:50,0:14:25.50:0,26,197	0/1:24,0:24:67.49:67,0,108	1/1:22,0:21:14.97:121,15,0	1/1:5,13:19:18.03:361,18,0	0/0:26,0:26:46.34:0,46,569	0/0:14,0:14:36.04:0,36,377	1/1:19,0:19:49.70:327,50,0	1/1:9,0:9:5.36:36,5,0	1/1:13,0:13:28.63:200,29,0	1/1:12,0:12:3.01:80,3,0	0/1:16,0:16:9.07:104,0,9	0/1:17,0:17:22.82:80,0,23	0/1:18,1:19:32.18:133,0,32	0/0:25,0:25:47.72:0,48,427	1/1:15,0:15:5.95:44,6,0	1/1:18,0:17:35:237,35,0	1/1:24,0:24:42.24:253,42,0	1/1:13,1:14:3:25,3,0	1/1:12,0:12:3.92:110,4,0	0/1:21,0:21:68.60:103,0,69	0/1:17,0:17:0.36:174,0,0	1/1:15,0:15:11.98:98,12,0	1/1:25,0:25:23.37:392,23,0	0/1:22,1:23:19.09:253,0,19	1/1:4,0:4:2.97:20,3,0
chr10	62545114	.	GCT	G	463.59	PASS	AB=0.870;AC=8;AF=0.148;AN=54;BaseQRankSum=-1.949;DP=552;FS=0.827;HRun=0;HaplotypeScore=89.1029;InbreedingCoeff=0.5311;MQ=66.92;MQ0=13;MQRankSum=0.156;QD=5.27;ReadPosRankSum=0.794;VQSLOD=2.4005;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:32:15.01:0,15,142	0/0:5,0:10:3:0,3,26	./.	0/0:49,0:13:0:0,0,0	0/0:12,0:28:25.93:0,26,145	0/0:23,0:22:14.84:0,15,105	0/0:19,0:19:20.98:0,21,190	0/0:29,0:29:13.28:0,13,149	1/1:8,5:14:17.88:178,18,0	0/0:18,0:18:14.13:0,14,173	0/0:8,0:9:8.99:0,9,88	0/0:11,0:14:3:0,3,26	0/0:12,0:12:2.89:0,3,27	0/0:16,0:16:17.95:0,18,151	0/0:17,0:17:17.95:0,18,167	0/0:19,0:19:17.97:0,18,165	0/0:17,0:27:24.02:0,24,247	0/0:16,0:16:11.96:0,12,105	0/0:18,0:17:8.97:0,9,81	0/1:24,0:24:2.33:2,0,143	0/0:15,0:15:2.98:0,3,22	1/1:10,1:12:5.85:47,6,0	1/1:10,10:21:23.89:244,24,0	0/1:11,4:17:1.97:127,0,2	0/0:15,0:15:14.84:0,15,116	0/0:25,0:25:7.68:0,8,276	0/0:23,0:23:32.96:0,33,291	0/0:4,0:4:2.98:0,3,22
chr10	62545116	.	T	TCG	4701.59	PASS	AB=0.737;AC=37;AF=0.661;AN=56;BaseQRankSum=-4.131;DP=602;FS=23.613;HRun=0;HaplotypeScore=95.3245;InbreedingCoeff=0.3785;MQ=66.35;MQ0=13;MQRankSum=2.896;QD=11.27;ReadPosRankSum=5.081;VQSLOD=2.2987;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:1.08:0,1,250	0/1:10,0:10:0.73:1,0,106	0/0:26,0:8:10.27:0,10,160	0/0:50,0:13:25.88:0,26,200	0/0:31,0:31:21.65:0,22,162	1/1:4,24:29:14.79:285,15,0	0/1:17,2:19:5.35:223,0,5	0/0:31,0:31:52.71:0,53,618	0/0:15,0:15:35.91:0,36,288	1/1:4,18:24:36.82:458,37,0	0/1:4,6:10:6.37:83,0,6	1/1:15,0:15:30.04:232,30,0	1/1:2,12:15:6.01:63,6,0	1/1:1,12:14:4.76:271,5,0	0/1:4,14:20:9:211,0,9	0/1:4,16:23:4.96:188,0,5	0/1:27,0:27:81.52:82,0,332	0/1:2,15:18:4.92:104,0,5	1/1:3,14:16:37.29:310,37,0	1/1:4,23:27:19:440,19,0	1/1:5,15:21:2.98:57,3,0	1/1:11,0:11:23.17:138,23,0	1/1:22,0:22:14.73:146,15,0	1/1:16,1:17:38.85:262,39,0	1/1:3,16:21:5.09:220,5,0	1/1:5,17:22:5.16:466,5,0	1/1:7,19:29:5.55:409,6,0	1/1:0,4:5:3.01:52,3,0
chr10	62546602	.	A	ACAAAAC	2108.81	PASS	AB=0.719;AC=5;AF=0.089;AN=56;BaseQRankSum=6.399;DP=655;FS=1.092;HRun=0;HaplotypeScore=167.0798;InbreedingCoeff=-0.0990;MQ=68.00;MQ0=0;MQRankSum=-3.460;QD=15.39;ReadPosRankSum=-2.349;VQSLOD=2.3243;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:16,0:38:99:727,0,429	0/1:1,1:13:99:116,0,155	0/0:24,0:23:37.70:0,38,765	0/0:23,0:23:18.20:0,18,801	0/1:13,0:34:99:588,0,404	0/0:19,0:18:57.17:0,57,1181	0/0:21,0:21:63.08:0,63,1064	0/1:24,0:21:99:251,0,377	0/0:7,0:15:39.02:0,39,524	0/0:22,0:22:63.21:0,63,1521	0/0:15,0:15:45.15:0,45,1041	0/0:19,0:19:57.15:0,57,988	0/0:16,0:16:48.13:0,48,951	0/0:19,0:19:57.19:0,57,1302	0/0:20,0:20:54.17:0,54,1108	0/0:17,0:17:51.17:0,51,1197	0/1:22,0:28:99:546,0,514	0/0:34,0:34:96.28:0,96,2232	0/0:24,0:23:69.22:0,69,1236	0/0:20,0:20:57.17:0,57,1245	0/0:25,0:25:69.21:0,69,1291	0/0:25,0:25:75.23:0,75,1567	0/0:29,0:29:82.47:0,82,1806	0/0:37,0:36:99:0,102,2128	0/0:24,0:24:66.22:0,66,1420	0/0:31,0:31:90.29:0,90,1880	0/0:34,0:34:99:0,102,1964	0/0:5,0:5:15.05:0,15,349
chr10	62546723	.	T	TTTTTTTTTTTTC	170.98	PASS	AB=1.000;AC=4;AF=0.071;AN=56;BaseQRankSum=-0.333;DP=466;FS=1.641;HRun=0;HaplotypeScore=290.5532;InbreedingCoeff=0.3065;MQ=54.21;MQ0=5;MQRankSum=-1.712;QD=5.34;ReadPosRankSum=-0.559;VQSLOD=1.9345;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:68.90:0,69,1904	0/0:10,0:10:29.46:0,29,648	0/1:10,0:6:16.27:16,0,283	0/0:8,0:6:9.35:0,9,141	0/0:20,0:20:32.06:0,32,1067	0/0:14,0:13:29.57:0,30,831	0/0:13,0:13:32.99:0,33,974	0/0:23,0:22:44.76:0,45,1257	1/1:2,1:8:2.98:180,3,0	0/0:17,0:16:44.97:0,45,1138	0/0:15,0:15:38.80:0,39,1010	0/0:10,0:10:23.80:0,24,702	0/0:15,0:14:32.95:0,33,934	0/0:17,0:17:48.08:0,48,1328	0/0:23,0:23:65.95:0,66,1802	0/0:22,0:22:62.95:0,63,1825	0/0:33,0:33:87.23:0,87,2553	0/0:11,0:11:30.03:0,30,818	0/0:20,0:19:53.19:0,53,1421	0/0:14,0:14:35.89:0,36,957	0/0:8,0:8:20.93:0,21,453	0/0:21,0:21:53.93:0,54,1425	0/0:20,0:18:50.69:0,51,1055	0/0:15,0:15:25.62:0,26,865	0/0:25,0:24:59.89:0,60,1516	0/0:14,0:14:42.07:0,42,1222	0/0:19,0:19:45.02:0,45,1325	0/1:14,0:14:76.51:77,0,1071
chr10	62546740	.	ACCCAGGGCCTTGCGCTTGCT	A	23653.97	PASS	AB=0.619;AC=38;AF=0.679;AN=56;BaseQRankSum=12.207;DP=287;FS=16.153;HRun=0;HaplotypeScore=167.3822;InbreedingCoeff=0.7550;MQ=42.40;MQ0=7;MQRankSum=-8.128;QD=133.64;ReadPosRankSum=9.829;VQSLOD=2.8905;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:60.63:0,61,3046	0/0:12,0:12:36.12:0,36,1761	0/0:5,0:2:6.02:0,6,156	0/0:4,0:2:2.94:0,3,18	0/0:10,0:10:25.90:0,26,1084	1/1:0,8:9:21.07:1123,21,0	0/1:2,6:7:99:676,0,249	0/0:15,0:14:36.12:0,36,1643	0/0:9,0:9:15.05:0,15,1094	1/1:0,7:6:18.06:1048,18,0	1/1:0,5:5:15.05:873,15,0	1/1:0,3:3:9.03:524,9,0	1/1:2,7:7:12.04:698,12,0	1/1:0,13:13:30.10:1744,30,0	1/1:0,13:13:30.10:1746,30,0	1/1:0,9:9:27.09:1571,27,0	0/0:31,0:31:90.27:0,90,6670	1/1:0,4:4:9.03:524,9,0	1/1:0,5:5:15.05:614,15,0	1/1:0,6:6:18.06:865,18,0	0/1:1,1:2:43.62:169,0,44	1/1:1,11:12:33.11:1866,33,0	1/1:1,12:11:33.11:1920,33,0	1/1:0,7:7:21.07:1177,21,0	1/1:1,18:18:42.14:2288,42,0	1/1:1,12:12:36.10:1797,36,0	1/1:0,10:10:18.53:1048,19,0	1/1:0,10:10:24.08:1386,24,0
chr10	62549169	.	AGT	A	20938.15	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=0.912;DP=813;FS=5.167;HRun=0;HaplotypeScore=101.1140;InbreedingCoeff=0.9687;MQ=64.76;MQ0=10;MQRankSum=-0.072;QD=28.37;ReadPosRankSum=5.421;VQSLOD=5.9000;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,50:60:99:1476,117,0	1/1:1,6:7:12.04:151,12,0	0/0:35,0:20:42:0,42,640	0/0:40,0:30:51.36:0,51,925	1/1:2,27:28:72.20:891,72,0	1/1:8,24:31:62.83:795,63,0	1/1:6,19:25:51.16:644,51,0	1/1:7,22:29:69.21:856,69,0	1/1:2,24:26:54.17:681,54,0	1/1:3,26:29:78.22:957,78,0	1/1:2,18:20:45.01:510,45,0	1/1:4,27:31:60.76:894,61,0	1/1:2,18:20:42.13:530,42,0	1/1:4,34:38:93.30:1173,93,0	1/1:6,27:33:75.21:931,75,0	1/1:6,29:35:87.28:1098,87,0	1/1:8,29:37:31.45:935,31,0	1/1:4,18:22:51.16:644,51,0	1/1:8,5:13:12.02:137,12,0	1/1:1,23:24:63.20:795,63,0	1/1:6,42:48:99:1287,102,0	1/1:1,23:23:66.21:833,66,0	1/1:1,27:28:78.25:984,78,0	1/1:2,31:32:72.23:909,72,0	1/1:3,26:29:66.21:833,66,0	1/1:1,21:22:63.19:782,63,0	1/1:7,24:31:63.20:795,63,0	1/1:1,11:12:33.11:417,33,0
chr10	62553671	.	GT	G	1965.97	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=7.597;DP=669;FS=2.389;HRun=2;HaplotypeScore=65.5321;InbreedingCoeff=0.9989;MQ=85.97;MQ0=0;MQRankSum=-1.860;QD=32.77;ReadPosRankSum=-2.023;VQSLOD=2.8931;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,141,2017	1/1:0,14:14:36.12:467,36,0	0/0:25,0:25:61:0,61,995	0/0:19,0:19:44.99:0,45,561	0/0:24,0:24:65.94:0,66,930	0/0:25,0:25:75.24:0,75,1100	0/0:29,0:29:87.26:0,87,1245	1/1:0,20:20:60.15:747,60,0	0/0:21,0:21:63.21:0,63,942	0/0:28,0:28:81.27:0,81,1203	0/0:9,0:9:27.09:0,27,403	0/0:21,0:21:63.21:0,63,941	0/0:29,0:29:81.25:0,81,1173	0/0:19,0:19:57.17:0,57,817	0/0:29,0:29:87.29:0,87,1299	0/0:26,0:26:78.26:0,78,1167	1/1:0,26:26:69.22:895,69,0	0/0:20,0:19:54.17:0,54,774	0/0:18,0:18:51.15:0,51,724	0/0:21,0:21:63.21:0,63,943	0/0:34,0:34:99:0,99,1451	0/0:28,0:28:81.27:0,81,1190	0/0:19,0:19:54.15:0,54,766	0/0:23,0:23:69.23:0,69,1032	0/0:28,0:28:78.25:0,78,1147	0/0:27,0:27:74.98:0,75,1071	0/0:30,0:29:90.28:0,90,1317	0/0:9,0:9:24.07:0,24,339
chr10	62554814	.	T	TG	1018.36	PASS	AB=0.821;AC=5;AF=0.089;AN=56;BaseQRankSum=4.095;DP=652;FS=2.135;HRun=0;HaplotypeScore=150.9559;InbreedingCoeff=0.7606;MQ=60.83;MQ0=4;MQRankSum=-6.129;QD=13.23;ReadPosRankSum=5.257;VQSLOD=4.8806;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:95.92:0,96,868	1/1:4,11:15:34.63:381,35,0	0/0:43,0:22:45.24:0,45,384	0/0:31,0:14:23.10:0,23,177	0/0:33,0:33:72.11:0,72,653	0/0:17,0:17:40.32:0,40,296	0/0:11,0:11:20.66:0,21,183	0/1:25,7:30:17.96:230,0,18	0/0:21,0:19:32.79:0,33,276	0/0:28,0:27:68.11:0,68,518	0/0:28,0:28:43.54:0,44,366	0/0:19,0:17:29.09:0,29,222	0/0:22,0:20:27.46:0,27,210	0/0:18,0:17:36.25:0,36,295	0/0:21,0:18:29.82:0,30,254	0/0:24,0:22:44.08:0,44,354	1/1:14,16:30:52.92:537,53,0	0/0:20,0:17:26.02:0,26,234	0/0:27,0:27:59.84:0,60,537	0/0:24,0:24:55.70:0,56,418	0/0:9,0:8:14.19:0,14,158	0/0:21,0:21:34.39:0,34,197	0/0:16,0:16:12.26:0,12,77	0/0:19,0:17:20.88:0,21,152	0/0:19,0:19:31.18:0,31,259	0/0:31,0:31:59.46:0,59,475	0/0:24,0:22:22.39:0,22,249	0/0:11,0:11:21.88:0,22,152
chr10	62554817	.	TTG	T	5475.08	PASS	AB=0.977;AC=35;AF=0.625;AN=56;BaseQRankSum=-12.281;DP=642;FS=29.994;HRun=0;HaplotypeScore=145.4900;InbreedingCoeff=-0.3606;MQ=61.84;MQ0=4;MQRankSum=5.840;QD=8.96;ReadPosRankSum=-8.975;VQSLOD=1.5411;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:22,13:35:87.47:1000,87,0	0/1:14,1:15:4.66:68,0,5	0/1:44,0:23:43.84:44,0,238	0/0:31,0:14:12.73:0,13,103	1/1:4,28:32:76.01:746,76,0	0/1:17,0:17:25.84:115,0,26	0/1:11,0:11:8.07:97,0,8	1/1:22,8:29:52.31:517,52,0	0/1:17,0:15:33.34:54,0,33	1/1:28,0:27:40.05:378,40,0	0/1:27,0:27:20.10:162,0,20	0/1:17,0:15:24.23:63,0,24	1/1:21,0:19:10.33:107,10,0	0/1:19,0:18:17.90:131,0,18	0/1:21,0:18:50.91:51,0,68	0/1:25,0:23:9.06:226,0,9	0/1:19,10:29:10.36:197,0,10	0/1:19,0:16:19.92:107,0,20	0/1:26,0:26:2.73:153,0,3	1/1:23,0:23:26.42:263,26,0	0/1:9,0:8:4.48:22,0,4	0/1:19,3:22:22.75:167,0,23	0/1:19,0:19:28.42:60,0,28	0/1:19,0:17:6.58:7,0,38	0/1:17,0:18:2.47:108,0,2	1/1:32,0:32:39.20:367,39,0	0/1:23,0:21:17.30:86,0,17	1/1:13,0:13:22.60:180,23,0
chr10	62554818	.	TG	T	7870.34	PASS	AB=0.962;AC=54;AF=0.964;AN=56;BaseQRankSum=-2.681;DP=643;FS=12.020;HRun=1;HaplotypeScore=131.3294;InbreedingCoeff=-0.0418;MQ=61.27;MQ0=4;MQRankSum=2.633;QD=12.24;ReadPosRankSum=0.339;VQSLOD=2.3938;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:29,5:34:96.56:758,97,0	1/1:17,0:17:41.60:203,42,0	0/1:41,2:23:36.80:37,0,212	0/1:29,1:13:46.06:46,0,65	1/1:31,1:32:77.02:518,77,0	1/1:17,0:17:31.97:202,32,0	1/1:10,0:10:24.43:147,24,0	1/1:28,0:27:58.73:379,59,0	1/1:14,2:15:30.14:199,30,0	1/1:28,2:29:76.52:562,77,0	1/1:25,0:27:57.44:380,57,0	1/1:18,0:16:35.04:224,35,0	1/1:18,3:20:27.66:244,28,0	1/1:17,0:17:37.39:258,37,0	1/1:20,1:19:33.02:201,33,0	1/1:25,0:23:55.92:401,56,0	1/1:28,0:28:47.66:228,48,0	1/1:19,0:16:33.84:205,34,0	1/1:23,3:28:51.39:369,51,0	1/1:19,4:23:56.95:459,57,0	1/1:7,0:6:10.65:58,11,0	1/1:22,0:22:49.10:250,49,0	1/1:20,0:20:21.34:133,21,0	1/1:19,0:17:7.18:50,7,0	1/1:17,1:18:40.83:259,41,0	1/1:32,1:33:81.05:575,81,0	1/1:19,2:21:44.71:257,45,0	1/1:12,1:13:37.02:269,37,0
chr10	62554819	.	G	GTT	5686.99	PASS	AB=0.967;AC=43;AF=0.768;AN=56;BaseQRankSum=-3.287;DP=653;FS=3.436;HRun=14;HaplotypeScore=154.2983;InbreedingCoeff=-0.0415;MQ=59.59;MQ0=4;MQRankSum=-2.285;QD=9.13;ReadPosRankSum=-2.310;VQSLOD=2.0804;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:34,0:34:66.95:67,0,69	1/1:7,10:17:48.10:735,48,0	0/1:42,0:22:8.97:9,0,286	0/0:30,0:13:2.03:0,2,111	0/1:32,0:32:0.83:1,0,71	0/1:17,0:17:0.38:104,0,0	0/1:11,0:11:3.42:57,0,3	1/1:13,15:27:60.91:709,61,0	1/1:19,0:17:2.41:97,2,0	1/1:30,0:29:21.36:239,21,0	1/1:27,0:27:14.28:215,14,0	1/1:18,0:16:21.52:225,22,0	0/1:22,0:20:8.33:79,0,8	1/1:19,0:18:4.16:89,4,0	0/1:22,0:19:1.76:149,0,2	1/1:26,0:24:34.48:221,34,0	1/1:13,16:29:55.50:861,55,0	0/1:19,0:16:8.36:85,0,8	0/1:28,0:28:17.30:130,0,17	1/1:23,0:23:4.73:66,5,0	0/1:7,0:6:2.18:15,0,2	1/1:13,0:24:31.16:390,31,0	1/1:2,0:20:26.74:167,27,0	0/1:8,0:17:10.64:136,0,11	1/1:19,0:19:16.16:229,16,0	1/1:33,0:33:32.80:324,33,0	1/1:23,0:21:22.58:199,23,0	1/1:14,0:14:4.44:91,4,0
chr10	62556530	.	TTTTG	T	9522.07	PASS	AB=0.882;AC=43;AF=0.768;AN=56;BaseQRankSum=5.361;DP=674;FS=4.320;HRun=0;HaplotypeScore=145.8020;InbreedingCoeff=0.8502;MQ=63.12;MQ0=2;MQRankSum=1.922;QD=18.07;ReadPosRankSum=3.401;VQSLOD=4.3189;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,20:28:10.39:447,10,0	0/0:11,0:11:24.08:0,24,565	0/0:24,0:18:12.04:0,12,226	0/0:20,0:13:8.24:0,8,143	1/1:6,23:29:66.09:967,66,0	1/1:25,4:29:47.81:552,48,0	1/1:17,2:19:28.26:367,28,0	0/0:34,0:34:45.11:0,45,1011	0/0:24,0:24:14.90:0,15,1300	1/1:33,1:34:8.16:507,8,0	1/1:19,3:22:38.82:506,39,0	1/1:21,1:22:35.60:407,36,0	1/1:17,3:20:25.43:296,25,0	1/1:17,0:17:24.56:242,25,0	1/1:31,1:32:55.17:551,55,0	1/1:22,1:23:31.16:212,31,0	0/0:34,0:33:69.20:0,69,1525	1/1:24,2:25:37.05:420,37,0	1/1:14,0:14:17.98:155,18,0	1/1:20,1:21:27.67:315,28,0	0/1:13,2:15:0.51:255,0,1	1/1:3,23:26:53.99:797,54,0	1/1:6,13:19:24.08:386,24,0	1/1:8,25:33:34.35:574,34,0	1/1:27,2:29:55.12:619,55,0	1/1:32,3:34:58.07:598,58,0	1/1:25,2:27:1.29:196,1,0	1/1:6,1:7:11.07:151,11,0
chr10	62556554	.	GTTT	G	681.13	PASS	AB=0.912;AC=19;AF=0.339;AN=56;BaseQRankSum=2.628;DP=759;FS=0.952;HRun=3;HaplotypeScore=189.6220;InbreedingCoeff=-0.5048;MQ=55.65;MQ0=21;MQRankSum=0.412;QD=1.45;ReadPosRankSum=-1.331;VQSLOD=-0.7466;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:30:30.36:30,0,326	0/0:9,0:9:27.09:0,27,630	0/0:43,0:13:36.12:0,36,596	0/0:56,0:16:45.11:0,45,622	0/1:33,0:33:77.43:77,0,336	0/1:27,2:29:54.12:54,0,326	0/1:16,3:19:40.43:40,0,173	0/0:36,0:36:99:0,105,1793	0/0:27,0:27:53.33:0,53,1451	0/1:31,3:33:15.27:15,0,453	0/1:24,5:29:88.67:89,0,176	0/1:19,5:24:52.32:52,0,223	0/1:15,5:20:64.59:65,0,142	0/1:12,7:19:51.09:51,0,161	0/1:24,5:29:43.36:43,0,335	0/0:18,3:21:22.22:0,22,412	0/0:31,0:30:87.28:0,87,1953	0/0:31,1:31:2.47:0,2,480	0/1:14,2:13:1.88:2,0,134	0/1:22,0:22:8.16:8,0,339	0/1:14,4:18:24.03:24,0,235	0/1:31,0:31:70.64:71,0,322	0/1:19,0:19:33.96:34,0,219	0/1:32,0:32:65.34:65,0,129	0/1:27,1:28:37.27:37,0,318	0/1:29,5:32:57.76:58,0,302	0/0:30,2:31:20.24:0,20,688	0/1:5,0:5:20.67:21,0,21
chr10	62556566	.	T	TGTTG	14251.42	PASS	AB=1.000;AC=37;AF=0.661;AN=56;BaseQRankSum=2.779;DP=773;FS=9.490;HRun=0;HaplotypeScore=162.7617;InbreedingCoeff=0.9358;MQ=55.95;MQ0=21;MQRankSum=0.297;QD=29.26;ReadPosRankSum=2.822;VQSLOD=4.0750;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:53.91:0,54,841	0/0:9,0:9:12.04:0,12,190	0/1:53,0:17:0.20:0,0,290	0/0:58,0:18:14.24:0,14,282	0/0:35,0:35:63.20:0,63,964	1/1:28,0:28:54.12:823,54,0	1/1:18,0:18:30.07:507,30,0	0/0:35,0:35:39.09:0,39,534	1/1:12,16:29:21.07:504,21,0	1/1:35,0:34:63.49:1137,63,0	1/1:24,0:24:47.36:937,47,0	1/1:24,0:24:54.11:894,54,0	1/1:19,0:19:45.13:826,45,0	1/1:19,0:19:48.15:893,48,0	1/1:29,0:29:66.14:964,66,0	1/1:20,0:20:57.11:795,57,0	0/0:27,0:27:54.18:0,54,865	1/1:29,0:28:62.98:835,63,0	1/1:18,0:15:29.93:510,30,0	1/1:22,0:22:50.86:693,51,0	1/1:20,0:20:38.62:738,39,0	0/0:34,0:34:60.18:0,60,904	0/0:24,0:24:39.11:0,39,579	0/0:33,0:33:42.14:0,42,658	1/1:26,0:26:42.11:627,42,0	1/1:37,0:36:33.19:1249,33,0	1/1:32,0:31:82.45:1220,82,0	1/1:5,0:5:6.02:100,6,0
chr10	62561387	.	TTGTGTGTG	T	3481.09	PASS	AB=0.780;AC=36;AF=0.692;AN=52;BaseQRankSum=4.581;DP=574;FS=0.000;HRun=0;HaplotypeScore=137.0920;InbreedingCoeff=0.6017;MQ=63.33;MQ0=23;MQRankSum=-5.827;QD=9.59;ReadPosRankSum=3.780;VQSLOD=2.2750;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:40:33.11:0,33,1082	1/1:4,0:6:2.90:16,3,0	./.	./.	0/0:13,0:18:21.05:0,21,362	1/1:19,8:25:14.87:331,15,0	1/1:23,1:26:6.02:130,6,0	0/0:25,0:23:4.67:0,5,44	0/0:15,0:17:21.03:0,21,755	0/1:11,0:20:58.51:59,0,87	1/1:8,0:7:5.90:43,6,0	1/1:16,10:26:14.34:352,14,0	1/1:11,0:11:5.88:88,6,0	1/1:15,1:20:9.01:155,9,0	1/1:11,11:22:11.94:298,12,0	1/1:13,10:23:15.05:372,15,0	0/1:22,0:25:63.88:80,0,64	1/1:13,6:20:8.88:110,9,0	1/1:20,0:18:2.14:54,2,0	1/1:15,8:23:23.52:458,24,0	1/1:19,0:19:9.01:131,9,0	0/0:11,0:12:18.06:0,18,537	0/0:17,0:17:17.72:0,18,636	0/0:29,0:28:42.12:0,42,1369	1/1:8,10:18:6.02:149,6,0	1/1:15,6:19:17.78:241,18,0	1/1:16,1:16:15.05:340,15,0	1/1:1,7:7:3.01:75,3,0
chr10	62561980	.	A	AT	946.34	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-5.808;DP=451;FS=2.070;HRun=10;HaplotypeScore=49.4452;InbreedingCoeff=0.7139;MQ=74.56;MQ0=0;MQRankSum=-1.812;QD=19.72;ReadPosRankSum=-0.363;VQSLOD=4.2787;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,18:23:42.11:448,42,0	0/0:10,1:11:0.97:0,1,211	0/0:15,1:16:19.98:0,20,149	0/0:16,0:11:16.37:0,16,86	1/1:3,22:25:41.85:619,42,0	0/0:12,1:14:6.01:0,6,245	0/0:13,0:14:6.22:0,6,242	0/0:31,0:31:71.80:0,72,582	0/0:7,0:7:17.98:0,18,148	0/0:19,0:19:50.93:0,51,418	0/0:15,0:16:15.49:0,15,232	0/0:9,0:9:20.96:0,21,172	0/0:11,0:11:32.96:0,33,271	0/0:7,0:7:20.98:0,21,172	0/0:5,0:5:11.96:0,12,95	0/0:9,0:9:23.97:0,24,197	0/0:21,2:23:30.91:0,31,456	0/0:24,0:26:63.55:0,64,486	0/0:16,1:17:6.90:0,7,254	0/0:24,0:24:68.91:0,69,564	0/0:9,0:9:20.93:0,21,169	0/0:1,0:10:10.17:0,10,29	0/0:1,0:14:24.44:0,24,71	0/0:1,0:5:8.15:0,8,24	0/0:22,0:22:56.88:0,57,464	0/0:23,1:24:27.94:0,28,436	0/0:15,0:14:38.95:0,39,320	0/0:26,0:26:73.93:0,74,591
chr10	62563494	.	AAAAAC	A	900.90	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.320;DP=675;FS=35.547;HRun=0;HaplotypeScore=130.3972;InbreedingCoeff=0.9501;MQ=67.07;MQ0=7;MQRankSum=2.514;QD=16.38;ReadPosRankSum=0.909;VQSLOD=1.6312;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:17,19:36:39.09:727,39,0	0/0:9,0:9:18.06:0,18,470	0/0:28,0:16:9.46:0,9,118	0/0:43,0:28:13.80:0,14,461	1/1:9,10:19:23.76:295,24,0	0/0:18,0:18:39.13:0,39,938	0/0:17,0:17:39.09:0,39,768	0/0:21,0:19:39.13:0,39,597	0/0:28,0:28:57.16:0,57,1400	0/0:28,0:28:48.16:0,48,1150	0/0:16,0:16:39.08:0,39,706	0/0:32,0:32:81.23:0,81,1704	0/0:32,0:32:63.20:0,63,1417	0/0:27,0:27:63.11:0,63,1637	0/0:24,0:24:51.17:0,51,1238	0/0:21,0:21:51.17:0,51,1281	0/0:35,0:35:66.23:0,66,1754	0/0:22,0:22:48.15:0,48,1047	0/0:26,0:25:42.11:0,42,795	0/0:21,0:20:42.14:0,42,1069	0/0:37,0:37:84.29:0,84,1968	0/0:15,0:15:33.10:0,33,663	0/0:19,0:19:39.13:0,39,806	0/0:32,0:32:66.18:0,66,1250	0/0:22,0:22:36.08:0,36,815	0/0:20,0:20:48.16:0,48,1104	0/0:21,0:21:42.14:0,42,1069	0/0:6,0:6:15.05:0,15,398
chr10	62563516	.	A	AAAC	1622.56	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-6.460;DP=657;FS=0.000;HRun=0;HaplotypeScore=93.5082;InbreedingCoeff=0.9271;MQ=59.11;MQ0=9;MQRankSum=1.353;QD=21.35;ReadPosRankSum=2.387;VQSLOD=3.5560;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:60.09:0,60,636	0/0:8,0:8:18.02:0,18,228	0/0:23,0:10:11.40:0,11,131	0/0:42,0:24:20.97:0,21,228	0/0:18,0:18:45.06:0,45,510	0/0:18,0:18:36.11:0,36,483	0/0:20,0:20:33.10:0,33,441	0/0:27,0:24:27.05:0,27,347	0/0:23,0:23:54.11:0,54,694	0/0:23,0:24:48.12:0,48,637	0/0:14,0:14:3.63:0,4,173	0/0:39,0:39:75.22:0,75,1017	0/0:29,0:29:51.04:0,51,602	0/0:26,0:26:66.21:0,66,899	0/0:23,0:23:54.15:0,54,728	0/0:21,0:21:51.11:0,51,642	0/0:29,0:29:75.22:0,75,1020	0/0:23,0:23:42.11:0,42,562	0/0:20,0:19:24.05:0,24,300	0/0:22,0:21:51.15:0,51,676	0/0:34,0:34:69.21:0,69,923	1/1:6,8:15:21.07:417,21,0	1/1:4,16:21:33.11:631,33,0	1/1:13,26:40:36.12:716,36,0	0/0:18,0:18:39.09:0,39,492	0/0:26,0:26:54.18:0,54,747	0/0:16,0:16:39.13:0,39,541	0/0:11,0:11:24.04:0,24,311
chr10	62568671	.	T	TG	2676.77	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-9.597;DP=586;FS=0.914;HRun=8;HaplotypeScore=69.8506;InbreedingCoeff=0.9972;MQ=82.16;MQ0=0;MQRankSum=-1.867;QD=20.43;ReadPosRankSum=-0.142;VQSLOD=3.4692;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,29:33:63.19:727,63,0	1/1:3,13:16:21.06:240,21,0	0/0:18,0:19:26.40:0,26,185	0/0:18,0:18:25.03:0,25,182	1/1:6,17:23:39.07:435,39,0	0/0:14,0:14:36.02:0,36,329	0/0:19,0:19:54.01:0,54,488	1/1:6,12:18:30.54:337,31,0	0/0:17,0:17:51.03:0,51,467	0/0:21,0:21:45.01:0,45,409	0/0:23,0:23:23.63:0,24,387	0/0:16,0:16:45.02:0,45,411	0/0:17,0:17:39.02:0,39,356	0/0:23,0:23:66:0,66,593	0/0:20,0:20:60.03:0,60,549	0/0:16,0:16:45.01:0,45,407	1/1:7,34:41:74.84:1113,75,0	0/0:27,0:27:72.03:0,72,659	0/0:19,0:19:32.99:0,33,300	0/0:15,0:15:27:0,27,246	0/0:44,0:44:99:0,114,1037	0/0:15,0:15:33.01:0,33,302	0/0:17,0:17:33.01:0,33,302	0/0:19,0:19:48.02:0,48,439	0/0:19,0:19:48.02:0,48,439	0/0:19,0:19:45.01:0,45,411	0/0:21,0:21:48.02:0,48,439	0/0:16,0:17:41.05:0,41,363
chr10	62575660	.	A	AAT	238.86	PASS	AB=0.909;AC=6;AF=0.115;AN=52;BaseQRankSum=-4.284;DP=300;FS=10.075;HRun=0;HaplotypeScore=43.0113;InbreedingCoeff=0.3650;MQ=85.00;MQ0=1;MQRankSum=-0.142;QD=5.69;ReadPosRankSum=0.981;VQSLOD=1.0882;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:24.07:0,24,293	0/0:4,0:4:3.01:0,3,37	0/0:15,0:12:5.89:0,6,28	0/0:21,0:13:5.28:0,5,112	0/0:7,0:7:15.03:0,15,171	0/0:16,0:16:42.13:0,42,513	0/0:5,0:5:6.02:0,6,73	0/0:32,0:32:63.19:0,63,759	1/1:4,4:8:15.05:243,15,0	0/0:14,0:14:15.04:0,15,175	0/0:6,0:6:12.04:0,12,146	0/0:7,0:7:15.05:0,15,183	0/0:4,0:4:6.02:0,6,73	0/0:6,0:6:18.06:0,18,218	0/0:6,0:6:15.05:0,15,183	0/0:9,0:9:12.04:0,12,147	0/0:17,0:19:44.79:0,45,493	0/1:18,2:20:46.21:46,0,499	0/0:9,0:10:26.87:0,27,306	0/0:4,0:5:11.25:0,11,115	0/0:5,0:5:12.02:0,12,133	./.	1/1:3,1:4:3.01:49,3,0	./.	0/1:9,1:10:21.61:22,0,266	0/0:11,0:11:21.06:0,21,245	0/0:7,0:7:15.05:0,15,183	0/0:25,0:25:57.14:0,57,663
chr10	62576788	.	TCACACACACA	T	3476.60	PASS	AB=0.806;AC=20;AF=0.370;AN=54;BaseQRankSum=5.418;DP=607;FS=3.386;HRun=0;HaplotypeScore=159.9285;InbreedingCoeff=0.5785;MQ=58.87;MQ0=17;MQRankSum=-6.658;QD=14.67;ReadPosRankSum=1.807;VQSLOD=2.1377;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:33:21.07:0,21,883	0/0:6,0:10:3.01:0,3,121	0/0:45,0:20:3.01:0,3,41	0/0:54,0:23:6.02:0,6,82	0/0:10,0:13:8.99:0,9,322	1/1:8,5:14:12.04:301,12,0	0/1:21,7:31:99:383,0,187	0/0:29,0:28:14.48:0,14,460	0/0:20,0:21:12.04:0,12,516	1/1:16,6:23:18.04:366,18,0	0/1:7,3:10:33.82:72,0,34	1/1:19,5:31:27.09:683,27,0	1/1:13,2:16:9.03:244,9,0	1/1:8,12:21:24.08:692,24,0	1/1:11,3:15:9:200,9,0	0/0:11,0:20:6.02:0,6,262	0/0:23,0:29:17.86:0,18,704	0/0:8,0:14:18.06:0,18,758	1/1:8,1:10:6.02:159,6,0	0/1:4,1:5:14.93:83,0,15	0/1:43,7:51:0.22:0,0,0	0/0:10,0:13:23.95:0,24,878	0/0:13,0:13:18.06:0,18,860	0/0:25,0:30:39.13:0,39,1611	1/1:4,4:10:12.04:295,12,0	0/0:22,0:22:30.57:0,31,1066	./.	0/0:11,0:13:6.02:0,6,279
chr10	62577837	.	C	CT	1954.34	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-8.446;DP=653;FS=3.031;HRun=7;HaplotypeScore=63.4226;InbreedingCoeff=0.9950;MQ=67.20;MQ0=7;MQRankSum=-0.424;QD=29.17;ReadPosRankSum=0.875;VQSLOD=4.3297;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,129,1239	0/0:14,0:14:39.06:0,39,376	0/0:23,0:17:19.06:0,19,253	0/0:30,0:15:18.82:0,19,226	0/0:13,0:13:39.03:0,39,365	0/0:17,0:17:48.08:0,48,463	0/0:17,0:17:48.08:0,48,463	0/0:38,0:38:85.94:0,86,892	0/0:15,0:15:39.05:0,39,371	0/0:26,0:26:75.12:0,75,723	0/0:18,0:18:39.05:0,39,377	0/0:21,0:21:54.09:0,54,521	0/0:14,0:14:36.05:0,36,347	0/0:12,0:12:30.05:0,30,290	0/0:27,0:27:69.06:0,69,654	0/0:22,0:22:63.10:0,63,608	0/0:30,0:30:81.13:0,81,782	0/0:32,0:32:87.13:0,87,840	0/0:40,0:40:96.13:0,96,922	0/0:17,0:17:48.08:0,48,463	0/0:20,0:20:54.09:0,54,521	1/1:0,16:16:48.15:575,48,0	1/1:2,29:31:81.25:978,81,0	1/1:4,16:20:45.14:544,45,0	0/0:27,0:27:75.12:0,75,724	0/0:27,0:27:75.09:0,75,713	0/0:22,0:22:57.08:0,57,544	0/0:17,0:17:45.07:0,45,435
chr10	62577971	.	TA	T	1010.09	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.317;DP=544;FS=19.449;HRun=11;HaplotypeScore=59.9257;InbreedingCoeff=0.8388;MQ=73.81;MQ0=0;MQRankSum=-0.926;QD=17.12;ReadPosRankSum=0.748;VQSLOD=2.7579;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,28:34:48.91:608,49,0	0/0:7,0:7:15.04:0,15,160	0/0:8,0:7:8.69:0,9,107	0/0:13,0:12:9.21:0,9,52	1/1:1,23:25:65.73:523,66,0	0/0:18,0:18:51.13:0,51,544	0/0:29,4:33:34.22:0,34,688	0/0:29,1:31:43.13:0,43,621	0/0:15,0:15:39.10:0,39,416	0/0:27,1:28:38.57:0,39,595	0/0:15,1:16:14.39:0,14,344	0/0:21,0:21:51.04:0,51,518	0/0:19,0:19:48.07:0,48,499	0/0:9,1:10:2.41:0,2,217	0/0:17,1:18:26.49:0,26,487	0/0:15,0:15:36.05:0,36,372	0/0:27,0:27:72.13:0,72,755	0/0:33,0:34:89.94:0,90,904	0/0:16,0:16:48.12:0,48,512	0/0:16,0:16:35.94:0,36,348	0/0:23,1:24:35.51:0,36,583	0/0:3,0:10:20.11:0,20,113	0/0:8,0:16:25.77:0,26,146	0/0:3,0:24:51.17:0,51,256	0/0:19,1:20:23.48:0,23,446	0/0:23,0:23:60.12:0,60,620	0/0:16,0:16:36.09:0,36,384	0/0:7,0:7:17.98:0,18,178
chr10	62578350	.	GTGATGATGA	G	16060.92	PASS	AB=0.647;AC=45;AF=0.804;AN=56;BaseQRankSum=10.360;DP=688;FS=0.543;HRun=0;HaplotypeScore=206.5299;InbreedingCoeff=0.8028;MQ=57.35;MQ0=0;MQRankSum=-10.101;QD=29.10;ReadPosRankSum=0.184;VQSLOD=4.0683;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:96.33:0,96,4223	0/1:5,0:11:5.43:5,0,12	0/0:17,0:13:2.68:0,3,11	0/0:25,0:17:15.88:0,16,309	0/0:23,0:23:54.19:0,54,2185	1/1:7,11:18:18.06:497,18,0	1/1:18,20:38:36.12:972,36,0	0/0:22,0:22:11.95:0,12,146	1/1:9,0:31:21.18:46,21,0	1/1:20,10:29:30.10:765,30,0	1/1:8,7:15:9.03:248,9,0	1/1:11,29:40:65.94:1820,66,0	1/1:12,20:32:46.71:1246,47,0	1/1:9,15:24:42.14:1159,42,0	1/1:10,14:24:36.12:993,36,0	1/1:4,24:29:57.20:1553,57,0	1/1:11,0:26:7.48:16,7,0	1/1:9,4:13:9.03:248,9,0	1/1:16,7:23:20.99:422,21,0	1/1:8,12:20:36.06:928,36,0	1/1:18,9:27:15.05:414,15,0	1/1:9,14:23:33.11:895,33,0	1/1:4,9:13:18.04:497,18,0	1/1:17,11:28:11.94:331,12,0	1/1:7,10:18:27.09:725,27,0	1/1:22,15:37:42.14:1121,42,0	1/1:10,14:24:33.11:911,33,0	1/1:1,7:8:9.03:248,9,0
chr10	62579635	.	AGGAC	A	16003.53	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=12.793;DP=574;FS=0.317;HRun=0;HaplotypeScore=106.1489;InbreedingCoeff=0.9834;MQ=80.69;MQ0=0;MQRankSum=-3.588;QD=48.20;ReadPosRankSum=3.616;VQSLOD=5.5397;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,99,2678	0/0:11,0:11:33.10:0,33,787	0/0:10,0:10:30.10:0,30,727	0/0:22,0:22:54.21:0,54,1196	0/0:17,0:17:51.18:0,51,1381	1/1:3,24:27:72.25:1392,72,0	1/1:1,27:28:66.23:1257,66,0	0/0:19,0:19:57.20:0,57,1510	0/0:24,0:24:72.25:0,72,1943	1/1:2,17:19:54.16:1007,54,0	1/1:1,7:8:17.98:269,18,0	1/1:2,20:22:57.20:1101,57,0	1/1:0,25:25:66.23:1268,66,0	1/1:1,18:19:54.18:1026,54,0	1/1:1,21:22:57.20:1101,57,0	1/1:2,14:16:36.12:690,36,0	0/0:35,0:35:99:0,105,2735	1/1:1,27:28:69.24:1335,69,0	1/1:3,8:11:24.08:465,24,0	1/1:0,12:12:33.06:600,33,0	1/1:2,34:36:90.26:1664,90,0	0/0:15,0:15:45.14:0,45,1123	0/0:16,0:16:48.16:0,48,1313	0/0:39,0:39:99:0,114,3084	1/1:2,13:15:42.10:747,42,0	1/1:1,19:20:57.20:1103,57,0	1/1:1,17:18:45.15:865,45,0	1/1:0,6:6:6.02:116,6,0
chr10	62579637	.	GAC	G	4413.71	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=18.538;DP=564;FS=0.000;HRun=0;HaplotypeScore=123.7505;InbreedingCoeff=0.9762;MQ=82.72;MQ0=0;MQRankSum=-4.411;QD=13.97;ReadPosRankSum=4.700;VQSLOD=4.3673;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,99,1976	0/0:11,0:11:33.10:0,33,606	0/0:12,0:12:36.11:0,36,661	0/0:23,0:23:62.95:0,63,1090	0/0:17,0:17:51.18:0,51,1018	1/1:24,2:26:69.65:390,70,0	1/1:27,0:27:63.88:356,64,0	0/0:20,0:20:60.21:0,60,1167	0/0:24,0:24:72.25:0,72,1437	1/1:17,1:18:52.35:298,52,0	1/1:7,0:7:11.45:61,11,0	1/1:20,0:20:55.09:303,55,0	1/1:25,0:25:62.77:344,63,0	1/1:18,1:19:52.31:293,52,0	1/1:21,0:21:55.07:304,55,0	1/1:14,0:14:34.65:186,35,0	0/0:37,0:37:99:0,111,2107	1/1:27,0:27:66.70:369,67,0	1/1:8,0:8:23.22:129,23,0	1/1:12,0:12:13.92:143,14,0	1/1:34,1:35:82.18:455,82,0	0/0:15,0:15:45.14:0,45,835	0/0:16,0:16:48.16:0,48,958	0/0:39,0:39:99:0,117,2321	1/1:13,2:15:33.19:210,33,0	1/1:19,0:19:55.12:305,55,0	1/1:17,0:17:43.28:235,43,0	1/1:6,0:6:5.81:32,6,0
chr10	62580758	.	T	TC	10129.29	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-11.530;DP=601;FS=3.820;HRun=6;HaplotypeScore=70.7238;InbreedingCoeff=0.9919;MQ=60.97;MQ0=7;MQRankSum=-1.966;QD=28.61;ReadPosRankSum=1.398;VQSLOD=5.6979;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:72.63:0,73,735	0/0:5,0:5:15.03:0,15,153	0/0:37,0:26:57.04:0,57,550	0/0:31,0:22:30.05:0,30,374	0/0:18,0:18:33.06:0,33,337	1/1:4,17:21:45.12:543,45,0	1/1:4,28:32:81.26:1016,81,0	0/0:16,0:16:36.07:0,36,367	0/0:21,0:21:30.05:0,30,297	1/1:1,23:24:66.18:812,66,0	1/1:3,7:10:24.07:291,24,0	1/1:3,14:17:42.13:528,42,0	1/1:9,13:22:21.54:265,22,0	1/1:1,16:17:36.12:453,36,0	1/1:3,17:20:54.11:638,54,0	1/1:0,16:16:39.12:491,39,0	0/0:25,0:25:57.13:0,57,582	1/1:2,25:27:66.21:829,66,0	1/1:5,17:22:51.16:639,51,0	1/1:2,9:11:24.08:302,24,0	1/1:11,41:52:99:1357,108,0	0/0:27,0:27:63.10:0,63,631	0/0:11,0:11:33.07:0,33,336	0/0:24,0:24:47.52:0,48,460	1/1:0,16:16:36.12:453,36,0	1/1:0,13:13:39.09:463,39,0	1/1:1,27:28:75.24:942,75,0	1/1:5,1:6:11.98:108,12,0
chr10	62580772	.	G	GGTGT	1534.52	PASS	AB=0.876;AC=17;AF=0.327;AN=52;BaseQRankSum=-1.450;DP=626;FS=48.952;HRun=0;HaplotypeScore=145.7254;InbreedingCoeff=0.3619;MQ=55.36;MQ0=18;MQRankSum=-0.229;QD=5.24;ReadPosRankSum=0.792;VQSLOD=1.2972;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:33,0:41:36.12:569,36,0	0/1:9,0:9:0:0,0,0	./.	./.	0/1:17,0:23:0.02:0,0,0	0/0:19,0:21:11.21:0,11,129	0/0:31,0:32:15.82:0,16,196	1/1:25,0:25:24.51:329,25,0	1/1:10,11:22:2.94:71,3,0	0/0:26,0:27:6.48:0,6,68	0/0:8,0:8:6.02:0,6,93	0/0:15,0:16:6.01:0,6,74	0/1:14,1:16:52.55:53,0,188	0/0:17,0:17:8.89:0,9,121	0/0:20,0:20:8.91:0,9,140	0/0:13,0:14:12.03:0,12,168	1/1:21,0:27:30.57:477,31,0	0/0:30,0:28:24.61:0,25,339	0/0:18,0:18:6.02:0,6,86	0/0:11,0:13:11.83:0,12,145	0/1:50,0:50:5.12:5,0,194	0/1:23,0:28:12.95:13,0,73	1/1:15,0:15:2.99:24,3,0	0/1:21,0:30:15.68:127,0,16	0/0:16,0:15:12.02:0,12,147	0/0:15,0:15:15.05:0,15,208	0/0:23,0:24:14.36:0,14,202	0/1:3,0:4:25.47:25,0,41
chr10	62580938	.	CT	C	3001.20	PASS	AB=0.864;AC=35;AF=0.625;AN=56;BaseQRankSum=1.991;DP=601;FS=0.848;HRun=14;HaplotypeScore=70.8583;InbreedingCoeff=0.7707;MQ=71.63;MQ0=7;MQRankSum=-0.004;QD=8.50;ReadPosRankSum=1.541;VQSLOD=2.9948;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,3:44:33.54:0,34,685	0/1:11,0:12:0.16:0,0,169	0/0:40,2:18:12.63:0,13,106	0/0:29,0:11:14.60:0,15,99	0/0:24,2:29:18.07:0,18,438	1/1:9,18:28:41.11:274,41,0	1/1:7,10:18:25.73:170,26,0	0/1:22,2:25:3.59:4,0,238	0/0:15,1:16:9.38:0,9,220	1/1:11,12:23:27.16:185,27,0	1/1:4,13:18:28.76:191,29,0	1/1:2,12:14:23.79:164,24,0	1/1:3,10:13:23.75:164,24,0	1/1:2,6:8:13.93:88,14,0	1/1:6,15:22:31.73:211,32,0	1/1:5,10:15:26.75:185,27,0	0/0:31,0:31:47.24:0,47,585	1/1:6,24:33:68.55:449,69,0	0/1:15,7:22:24.49:135,0,24	1/1:10,9:20:7.40:166,7,0	1/1:11,15:26:11.32:220,11,0	0/0:5,0:16:17.49:0,17,97	0/0:5,0:13:25.21:0,25,146	0/0:7,0:27:46.32:0,46,260	1/1:2,10:13:5.29:143,5,0	1/1:1,11:14:33.77:216,34,0	1/1:9,11:23:32.45:197,32,0	1/1:1,2:4:7.95:47,8,0
chr10	62581068	.	ATTT	A	4490.12	PASS	AB=0.615;AC=33;AF=0.589;AN=56;BaseQRankSum=3.443;DP=510;FS=2.008;HRun=16;HaplotypeScore=104.6768;InbreedingCoeff=0.8499;MQ=64.46;MQ0=3;MQRankSum=-1.006;QD=15.87;ReadPosRankSum=7.683;VQSLOD=3.5503;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:66.14:0,66,976	0/0:5,0:13:23.04:0,23,166	0/0:14,0:10:15.13:0,15,191	0/0:15,0:12:5.40:0,5,135	0/0:23,0:27:58.80:0,59,777	1/1:3,13:18:19.35:250,19,0	1/1:5,14:19:38.93:420,39,0	0/0:10,0:23:43:0,43,329	0/0:9,0:16:24.03:0,24,296	1/1:9,9:18:4.06:235,4,0	1/1:6,5:12:6.65:79,7,0	1/1:2,9:12:23.83:244,24,0	1/1:6,5:12:17.78:179,18,0	0/1:6,10:16:0.62:202,0,1	1/1:5,8:14:6.24:120,6,0	1/1:5,11:18:31.24:337,31,0	0/0:16,0:33:70.89:0,71,681	1/1:9,14:26:36.36:386,36,0	1/1:8,9:17:6.31:295,6,0	1/1:7,8:15:17.74:194,18,0	1/1:3,19:22:41.81:452,42,0	0/0:13,1:17:6.78:0,7,516	0/0:10,0:13:17.78:0,18,157	0/0:18,0:22:50.30:0,50,615	1/1:4,12:17:13.95:348,14,0	1/1:5,12:18:34.46:385,34,0	1/1:7,11:20:23.73:283,24,0	1/1:3,4:7:8.89:83,9,0
chr10	62581834	.	TA	T	1100.77	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=7.708;DP=568;FS=1.609;HRun=12;HaplotypeScore=61.5319;InbreedingCoeff=0.8417;MQ=73.39;MQ0=0;MQRankSum=-0.116;QD=15.08;ReadPosRankSum=2.274;VQSLOD=4.6413;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,23:29:61.78:470,62,0	0/0:12,0:13:35.89:0,36,343	0/0:16,0:16:14.83:0,15,126	0/0:7,0:7:5.83:0,6,58	1/1:3,25:28:62.67:488,63,0	0/0:23,0:23:56.94:0,57,556	0/0:9,0:9:21.04:0,21,213	0/0:21,1:22:9.83:0,10,282	1/1:1,14:16:37.90:285,38,0	0/0:22,1:26:27.50:0,28,415	0/0:25,0:26:71.89:0,72,691	0/0:16,1:17:21.84:0,22,397	0/0:18,1:19:24.83:0,25,421	0/0:17,0:18:45.02:0,45,430	0/0:20,0:20:48.08:0,48,478	0/0:21,1:22:39.86:0,40,569	0/0:27,1:28:33.87:0,34,520	0/0:21,0:22:47.92:0,48,466	0/0:12,0:12:21.04:0,21,213	0/0:29,2:31:31.67:0,32,679	0/0:11,0:11:12.02:0,12,122	0/0:23,1:24:27.85:0,28,459	0/0:17,2:19:8.03:0,8,234	0/0:18,0:18:42.08:0,42,426	0/0:20,0:20:42.05:0,42,414	0/0:21,2:23:1.64:0,2,360	0/0:33,0:33:84.62:0,85,842	0/0:14,0:14:42.01:0,42,397
chr10	62582969	.	T	TGC	422.13	PASS	AB=0.858;AC=6;AF=0.107;AN=56;BaseQRankSum=2.748;DP=583;FS=18.228;HRun=0;HaplotypeScore=113.7172;InbreedingCoeff=0.0601;MQ=56.21;MQ0=12;MQRankSum=2.273;QD=2.48;ReadPosRankSum=-4.485;VQSLOD=-0.5761;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:11,26:38:18.94:285,0,19	0/1:4,0:3:18:22,0,18	0/0:7,0:3:8.21:0,8,56	0/0:10,0:2:0.89:0,1,2	0/1:4,14:17:0.92:145,0,1	0/0:20,0:18:37.17:0,37,334	0/1:51,0:50:0.15:0,0,525	0/0:5,0:17:25.09:0,25,189	0/0:23,0:23:35.80:0,36,279	0/0:16,0:12:26.38:0,26,209	0/0:5,0:6:11.98:0,12,112	0/0:32,0:30:61.28:0,61,708	0/0:16,0:16:38.73:0,39,376	0/0:21,0:21:47.93:0,48,430	0/0:15,0:16:41.59:0,42,374	0/0:10,0:10:20.95:0,21,196	0/0:29,0:29:11.78:0,12,107	0/0:19,0:20:53.29:0,53,492	0/0:23,0:22:19.87:0,20,356	0/0:1,0:6:2.96:0,3,19	0/0:61,0:60:86.73:0,87,893	0/1:13,0:13:24.89:25,0,53	0/0:13,0:12:2.01:0,2,137	0/1:46,0:45:59.55:60,0,369	0/0:22,0:23:27.44:0,27,295	0/0:4,0:15:32.14:0,32,228	0/0:16,0:18:39.95:0,40,373	0/0:9,0:9:19.76:0,20,156
chr10	62582974	.	GCACACA	G	153.20	PASS	AB=1.000;AC=4;AF=0.080;AN=50;BaseQRankSum=0.387;DP=621;FS=0.000;HRun=0;HaplotypeScore=152.9350;InbreedingCoeff=0.3506;MQ=53.86;MQ0=15;MQRankSum=-3.014;QD=1.72;ReadPosRankSum=0.263;VQSLOD=2.6110;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:37:32.81:0,33,776	0/0:4,0:3:2.99:0,3,24	./.	./.	0/0:18,0:18:15.05:0,15,384	0/0:20,0:18:21.01:0,21,496	0/0:49,0:48:46.01:0,46,1065	0/0:17,0:16:9.01:0,9,144	1/1:10,12:24:12.04:222,12,0	0/0:15,0:11:18.06:0,18,376	0/0:7,0:7:3.01:0,3,97	0/1:35,0:33:0.32:0,0,1270	0/0:17,0:17:30.05:0,30,604	0/0:24,0:24:39.54:0,40,926	0/0:18,0:18:20.81:0,21,551	0/0:12,0:12:21.05:0,21,590	0/1:30,0:30:28.59:29,0,63	0/0:23,0:22:36.10:0,36,892	0/0:26,0:25:15.99:0,16,419	./.	0/0:71,0:68:65.66:0,66,1613	0/0:15,0:15:17.80:0,18,489	0/0:16,0:15:18.53:0,19,464	0/0:53,0:52:72.66:0,73,1710	0/0:23,0:23:29.36:0,29,672	0/0:16,0:15:15.01:0,15,174	0/0:19,0:19:33.10:0,33,821	0/0:9,0:9:6.02:0,6,174
chr10	62583283	.	CAAAAAAAATAAAAAT	C	11567.61	PASS	AB=0.985;AC=28;AF=0.500;AN=56;BaseQRankSum=6.170;DP=485;FS=0.988;HRun=0;HaplotypeScore=197.4584;InbreedingCoeff=0.4888;MQ=49.52;MQ0=13;MQRankSum=-3.577;QD=39.21;ReadPosRankSum=9.670;VQSLOD=2.9454;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:59.83:0,60,1852	0/0:5,0:5:9.03:0,9,311	0/0:21,0:9:3.06:0,3,399	0/0:15,0:6:6.93:0,7,72	0/0:20,0:20:13.59:0,14,374	1/1:21,1:21:42.14:1196,42,0	0/1:23,1:23:99:876,0,149	0/0:22,0:21:45.12:0,45,1529	0/0:10,0:10:24.04:0,24,916	1/1:19,0:17:30.10:808,30,0	0/1:8,0:7:99:165,0,180	1/1:21,0:21:30.10:870,30,0	1/1:15,0:15:24.08:696,24,0	1/1:23,1:24:33.11:995,33,0	1/1:20,0:20:34:933,34,0	1/1:16,0:16:21.07:609,21,0	0/0:20,0:19:36.12:0,36,1581	0/1:17,1:16:33.43:540,0,33	0/1:9,0:8:99:153,0,542	0/1:10,0:10:51.06:414,0,51	1/1:16,0:15:3.01:87,3,0	0/0:12,0:12:26.99:0,27,674	0/0:10,0:9:18.01:0,18,467	0/0:21,0:14:20.86:0,21,600	1/1:15,0:14:18.06:462,18,0	0/1:25,0:23:99:1226,0,131	1/1:23,0:22:45.15:1278,45,0	1/1:10,0:10:9.03:261,9,0
chr10	62583284	.	AAAAAAAATAAAAAT	A	16014.57	PASS	AB=0.663;AC=28;AF=0.500;AN=56;BaseQRankSum=0.451;DP=482;FS=2.176;HRun=0;HaplotypeScore=173.1333;InbreedingCoeff=0.4654;MQ=49.39;MQ0=13;MQRankSum=-1.091;QD=55.03;ReadPosRankSum=9.715;VQSLOD=3.7137;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:51.10:0,51,1604	0/0:5,0:5:9.01:0,9,256	0/0:23,0:9:1.88:0,2,402	0/0:15,0:6:6.52:0,7,75	0/0:19,0:19:16.52:0,17,332	1/1:6,16:21:42.14:1601,42,0	0/1:11,13:23:99:1198,0,136	0/0:23,0:21:45.09:0,45,1383	0/0:10,0:10:24.04:0,24,855	1/1:8,11:17:30.10:1140,30,0	0/1:5,3:7:99:231,0,168	1/1:4,17:21:30.10:1201,30,0	1/1:3,12:15:24.08:961,24,0	1/1:3,19:22:33.11:1301,33,0	1/1:4,15:19:34:1298,34,0	1/1:4,11:15:21.07:841,21,0	0/0:21,0:19:36.05:0,36,1430	0/1:8,10:16:32.27:680,0,32	0/1:6,3:8:99:244,0,506	0/1:4,6:10:34.36:594,0,34	1/1:7,9:15:3.01:120,3,0	0/0:12,0:12:26.91:0,27,568	0/0:11,0:10:20.99:0,21,437	0/0:21,0:14:3.98:0,4,485	1/1:4,11:14:18.06:661,18,0	0/1:7,18:23:99:1810,0,119	1/1:2,21:23:45.15:1775,45,0	1/1:2,8:10:9.03:360,9,0
chr10	62583291	.	AT	A	3619.86	PASS	AB=0.989;AC=48;AF=0.857;AN=56;BaseQRankSum=1.631;DP=414;FS=21.405;HRun=1;HaplotypeScore=128.6550;InbreedingCoeff=0.0407;MQ=57.34;MQ0=10;MQRankSum=-2.320;QD=9.12;ReadPosRankSum=1.554;VQSLOD=0.0008;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:16,14:29:71.97:553,72,0	0/1:4,0:4:21.49:21,0,30	0/1:26,2:14:28.22:28,0,47	0/0:17,0:7:5.89:0,6,21	1/1:16,5:21:26.63:184,27,0	1/1:17,0:17:39.73:205,40,0	1/1:15,0:15:0.31:150,0,0	0/1:22,0:21:2.41:162,0,2	1/1:11,0:11:19.99:155,20,0	1/1:12,0:11:28.69:151,29,0	0/1:4,0:4:18.34:18,0,29	1/1:17,0:17:28.15:135,28,0	1/1:12,0:12:22.60:108,23,0	1/1:20,0:20:30.95:148,31,0	1/1:16,0:16:31.07:152,31,0	1/1:11,0:11:19.80:95,20,0	1/1:18,0:16:12.98:97,13,0	1/1:12,0:12:3.96:65,4,0	0/1:7,0:6:16.34:16,0,100	1/1:8,0:8:20.05:112,20,0	1/1:9,0:9:2.84:14,3,0	1/1:11,1:12:27.74:210,28,0	1/1:10,1:10:29.72:213,30,0	0/1:20,0:13:20.39:79,0,20	1/1:11,0:10:17.25:91,17,0	1/1:20,0:19:10.47:213,10,0	1/1:21,0:20:42.44:206,42,0	1/1:8,0:8:8.48:41,8,0
chr10	62583295	.	AAAT	A	3963.65	PASS	AB=1.000;AC=41;AF=0.732;AN=56;BaseQRankSum=4.392;DP=419;FS=18.081;HRun=0;HaplotypeScore=139.8503;InbreedingCoeff=0.1271;MQ=58.75;MQ0=10;MQRankSum=-2.046;QD=10.74;ReadPosRankSum=3.050;VQSLOD=2.4371;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:26,4:29:40.58:483,41,0	0/0:4,0:4:6.69:0,7,59	0/0:28,0:14:8.65:0,9,250	0/1:18,0:8:4.41:4,0,26	1/1:20,3:23:30.31:189,30,0	1/1:17,0:17:41.61:295,42,0	0/1:15,0:15:6.71:184,0,7	0/1:23,0:22:44.76:45,0,208	0/1:11,0:11:56.02:56,0,76	1/1:12,0:11:29.87:229,30,0	0/1:4,0:4:33.11:34,0,33	1/1:17,0:17:29.83:217,30,0	1/1:12,0:12:23.86:173,24,0	1/1:20,0:20:32.80:237,33,0	1/1:15,0:15:32.80:240,33,0	1/1:11,0:11:20.88:152,21,0	0/0:18,0:16:4.55:0,5,171	1/1:12,0:12:3.47:112,3,0	0/1:7,0:6:28.54:29,0,119	1/1:8,0:8:2.49:95,2,0	1/1:9,0:9:2.98:22,3,0	0/1:13,0:13:2.94:104,0,3	0/1:12,0:11:0.96:137,0,1	0/1:20,0:13:38.96:62,0,39	1/1:11,0:10:17.88:129,18,0	1/1:20,0:19:8.58:346,9,0	1/1:21,0:20:44.74:325,45,0	1/1:8,0:8:8.95:65,9,0
chr10	62583296	.	AAT	A	3678.48	PASS	AB=1.000;AC=45;AF=0.804;AN=56;BaseQRankSum=3.008;DP=423;FS=9.200;HRun=0;HaplotypeScore=136.6235;InbreedingCoeff=0.0011;MQ=60.09;MQ0=10;MQRankSum=-2.321;QD=9.31;ReadPosRankSum=2.232;VQSLOD=2.9150;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:27,3:29:55.22:587,55,0	0/1:5,0:5:27.64:34,0,28	0/0:28,0:14:8.48:0,8,217	0/1:19,0:9:2.34:2,0,24	1/1:25,0:25:32.66:259,33,0	1/1:17,0:17:40.49:238,40,0	0/1:15,0:15:6.26:133,0,6	0/1:23,0:22:65.63:66,0,109	0/1:10,0:10:18.26:67,0,18	1/1:12,0:11:29.11:179,29,0	0/1:4,0:4:21.01:21,0,30	1/1:17,0:17:28.75:149,29,0	1/1:12,0:12:23:119,23,0	1/1:20,0:20:31.56:162,32,0	1/1:15,0:15:31.73:171,32,0	1/1:11,0:11:20.13:104,20,0	0/1:18,0:16:29.50:30,0,79	1/1:12,0:12:4.09:73,4,0	0/1:7,0:6:38.23:38,0,87	1/1:8,0:8:16.42:98,16,0	1/1:9,0:9:2.88:15,3,0	1/1:13,0:13:14.27:153,14,0	1/1:12,1:12:30.68:216,31,0	0/1:20,0:13:24.58:83,0,25	1/1:11,0:10:17.46:102,17,0	1/1:20,0:19:20.44:306,20,0	1/1:21,0:20:43.23:230,43,0	1/1:8,0:8:8.63:45,9,0
chr10	62583297	.	AT	A	3594.68	PASS	AB=0.992;AC=50;AF=0.893;AN=56;BaseQRankSum=0.944;DP=421;FS=31.134;HRun=1;HaplotypeScore=131.9631;InbreedingCoeff=-0.0146;MQ=60.25;MQ0=10;MQRankSum=-3.034;QD=8.54;ReadPosRankSum=2.121;VQSLOD=-0.4965;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:24,5:28:66.58:510,67,0	0/1:5,0:5:13.48:46,0,13	0/1:28,0:14:8.83:9,0,147	0/1:18,1:9:7.13:10,0,7	1/1:3,22:25:32.62:228,33,0	1/1:17,0:17:34.41:150,34,0	1/1:15,0:15:1.60:114,2,0	1/1:23,0:22:15.28:182,15,0	1/1:10,0:10:17.65:134,18,0	1/1:12,0:11:26.22:180,26,0	0/1:4,0:4:8.38:8,0,19	1/1:17,0:17:23.71:80,24,0	1/1:13,0:13:21.81:78,22,0	1/1:20,0:20:25.93:87,26,0	1/1:15,0:15:26.72:117,27,0	1/1:11,0:11:16.60:56,17,0	1/1:18,0:16:16.84:127,17,0	1/1:12,0:12:9.64:41,10,0	0/1:7,0:6:49.34:49,0,52	1/1:8,0:8:18.47:115,18,0	1/1:9,0:9:2.37:8,2,0	1/1:12,0:12:30.22:239,30,0	1/1:13,0:12:35.66:259,36,0	0/1:19,0:12:5.01:102,0,5	1/1:11,0:10:15.50:104,16,0	1/1:20,0:19:28.85:387,29,0	1/1:21,0:20:36.21:149,36,0	1/1:8,0:8:7.11:24,7,0
chr10	62583303	.	A	AT	44.16	PASS	AB=0.885;AC=5;AF=0.089;AN=56;BaseQRankSum=-0.891;DP=479;FS=31.230;HRun=0;HaplotypeScore=150.4270;InbreedingCoeff=-0.1096;MQ=60.13;MQ0=8;MQRankSum=0.001;QD=0.72;ReadPosRankSum=-2.896;VQSLOD=0.5735;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:30:61.28:0,61,486	0/1:5,1:6:23.25:23,0,71	0/0:29,0:15:9.79:0,10,257	0/1:19,0:9:1.11:1,0,46	0/0:26,0:26:36.23:0,36,266	0/0:20,0:20:46.35:0,46,232	0/0:16,1:17:0.39:0,0,116	0/0:25,1:25:20.82:0,21,361	0/0:10,0:10:12.65:0,13,124	0/0:15,0:14:34.85:0,35,175	0/1:6,1:7:17.64:18,0,72	0/0:22,0:22:42.35:0,42,242	0/0:14,0:14:27.93:0,28,139	0/0:24,0:24:38.37:0,38,181	0/0:20,0:20:41:0,41,225	0/0:13,0:13:25.18:0,25,128	0/0:19,0:18:38.08:0,38,282	0/0:16,0:16:23.43:0,23,141	0/1:8,4:11:92.24:92,0,101	0/0:9,0:9:19.12:0,19,109	0/0:11,0:11:5.71:0,6,31	0/0:11,0:11:26.74:0,27,194	0/0:12,0:11:25.02:0,25,174	0/1:16,1:11:17.50:18,0,94	0/0:14,0:13:23.03:0,23,122	0/0:22,1:22:8.56:0,9,195	0/0:24,0:23:49.12:0,49,233	0/0:12,0:12:17.14:0,17,96
chr10	62585424	.	A	AT	1424.53	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=-4.700;DP=573;FS=2.666;HRun=8;HaplotypeScore=56.9975;InbreedingCoeff=0.8384;MQ=79.39;MQ0=0;MQRankSum=-2.170;QD=19.25;ReadPosRankSum=-0.821;VQSLOD=3.2789;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:33:89.99:0,90,815	0/0:9,0:9:23.99:0,24,215	0/0:18,0:18:44.81:0,45,396	0/1:23,0:22:16.25:16,0,227	0/0:18,0:18:45.02:0,45,412	0/0:12,0:12:30.01:0,30,274	0/0:22,0:22:54.02:0,54,494	0/0:22,0:22:63.02:0,63,574	0/0:14,0:14:35.98:0,36,320	0/0:24,0:24:69.03:0,69,632	0/0:11,0:11:33.02:0,33,302	0/0:31,0:31:90.05:0,90,824	0/0:12,0:12:36.02:0,36,330	0/0:21,0:21:60.03:0,60,549	0/0:30,0:30:72.01:0,72,652	0/0:22,0:22:57.01:0,57,517	0/0:30,0:29:81.03:0,81,736	0/0:26,0:26:68.98:0,69,619	0/0:19,0:19:48:0,48,434	0/0:17,0:17:45:0,45,406	0/0:15,0:15:29.99:0,30,269	1/1:2,13:15:39.12:450,39,0	1/1:1,17:18:51.15:589,51,0	1/1:2,16:18:45.13:518,45,0	0/0:30,0:30:75.02:0,75,686	0/0:28,0:28:69.01:0,69,628	0/0:23,0:23:60:0,60,543	0/0:11,0:11:24.01:0,24,219
chr10	62591647	.	AAGAGAGAGAGAGAGAGAGAGAG	A	1976.15	PASS	AB=0.857;AC=25;AF=0.625;AN=40;BaseQRankSum=1.983;DP=353;FS=30.191;HRun=0;HaplotypeScore=88.7731;InbreedingCoeff=0.3686;MQ=43.75;MQ0=92;MQRankSum=0.483;QD=14.64;ReadPosRankSum=3.483;VQSLOD=0.0673;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:12:3.01:0,3,76	./.	./.	./.	./.	1/1:9,2:7:6.02:325,6,0	1/1:11,0:5:3.01:47,3,0	0/0:26,0:11:17.09:0,17,661	0/0:10,0:9:5.05:0,5,136	0/1:10,2:8:27.62:212,0,28	1/1:2,0:3:3.01:74,3,0	1/1:10,6:15:3.01:174,3,0	./.	1/1:13,0:11:3.01:47,3,0	1/1:9,0:8:2.80:13,3,0	1/1:4,4:8:2.81:173,3,0	0/0:12,0:6:6.02:0,6,153	1/1:10,0:5:5.81:60,6,0	1/1:14,0:14:3:154,3,0	1/1:4,0:2:3.01:47,3,0	./.	0/0:4,0:6:3.01:0,3,127	0/0:6,0:7:3.01:0,3,104	0/0:13,0:8:3.01:0,3,127	1/1:6,3:9:6.02:342,6,0	1/1:8,5:12:12.03:441,12,0	./.	./.
chr10	62591677	.	G	GC	212.91	PASS	AB=0.889;AC=12;AF=0.261;AN=46;BaseQRankSum=-0.273;DP=252;FS=16.691;HRun=0;HaplotypeScore=42.0181;InbreedingCoeff=0.0046;MQ=27.93;MQ0=93;MQRankSum=0.313;QD=3.49;ReadPosRankSum=1.122;VQSLOD=1.1793;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:9:3.01:0,3,41	./.	0/0:16,0:1:1.25:0,1,3	0/0:40,1:1:3.01:0,3,32	./.	0/1:8,0:3:2.73:39,0,3	0/1:2,4:3:35.23:41,0,35	0/0:22,0:12:33.11:0,33,456	0/0:9,0:7:5.05:0,5,48	0/1:10,0:7:31.58:32,0,98	1/1:1,0:1:0.89:2,1,0	0/0:9,1:7:2.22:0,2,7	./.	0/1:5,1:7:35.21:35,0,102	0/1:5,1:5:7.18:7,0,35	0/0:5,0:4:2.22:0,2,8	0/0:12,0:6:6.02:0,6,83	1/1:5,2:2:5.81:60,6,0	0/0:3,0:2:5.38:0,5,49	1/1:2,2:2:3.01:47,3,0	0/0:11,0:7:2.94:0,3,20	0/0:4,0:4:2.81:0,3,14	0/0:8,0:7:2.49:0,2,40	0/0:14,0:7:2.82:0,3,14	0/0:4,0:4:4.96:0,5,20	0/1:12,0:11:68.47:68,0,161	./.	./.
chr10	62592194	.	G	GC	84.92	PASS	AB=0.917;AC=8;AF=0.80;AN=10;BaseQRankSum=-0.978;DP=14;FS=0.000;HRun=0;HaplotypeScore=26.1327;MQ=193.53;MQ0=0;MQRankSum=-0.978;QD=7.08;ReadPosRankSum=-1.377;VQSLOD=2.8472;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/1:4,1:5:4.12:41,0,4	0/1:3,0:3:14.54:35,0,15	./.	./.	./.	./.	./.	./.	./.	1/1:0,2:2:5.84:35,6,0	./.	./.	./.	1/1:0,1:1:2.97:20,3,0	./.	./.	1/1:0,1:1:3:27,3,0	./.	./.	./.	./.	./.	./.	./.	./.	./.
chr10	62592904	.	AT	A	1529.86	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.592;DP=600;FS=11.949;HRun=7;HaplotypeScore=56.5564;InbreedingCoeff=0.9984;MQ=76.05;MQ0=0;MQRankSum=-3.143;QD=23.18;ReadPosRankSum=1.583;VQSLOD=2.9951;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,42:43:99:1101,108,0	0/0:10,0:10:30.09:0,30,365	0/0:16,0:15:33.07:0,33,380	0/0:11,0:11:23.85:0,24,246	1/1:4,19:23:54.12:550,54,0	0/0:17,0:17:51.15:0,51,629	0/0:21,0:21:59.54:0,60,712	0/0:25,0:25:72.04:0,72,859	0/0:19,0:19:51.12:0,51,613	0/0:19,0:19:48.14:0,48,574	0/0:21,0:21:60.18:0,60,743	0/0:23,0:23:57.16:0,57,692	0/0:16,0:16:45.13:0,45,553	0/0:24,0:24:66.21:0,66,830	0/0:23,0:23:63.18:0,63,768	0/0:31,0:31:52.81:0,53,884	0/0:28,0:28:69.21:0,69,855	0/0:20,0:20:57.18:0,57,716	0/0:23,0:23:57.17:0,57,699	0/0:26,0:26:72.20:0,72,879	0/0:15,0:15:42.13:0,42,528	0/0:16,0:16:42.13:0,42,528	0/0:16,0:16:45.14:0,45,566	0/0:26,0:26:75.20:0,75,903	0/0:21,0:21:63.16:0,63,774	0/0:30,0:30:75.23:0,75,930	0/0:20,0:19:60.18:0,60,741	0/0:17,0:17:48.15:0,48,604
chr10	62595333	.	G	GACAC	2190.51	PASS	AB=0.866;AC=24;AF=0.480;AN=50;BaseQRankSum=-3.141;DP=606;FS=10.718;HRun=0;HaplotypeScore=111.2565;InbreedingCoeff=0.4612;MQ=69.90;MQ0=11;MQRankSum=1.492;QD=7.16;ReadPosRankSum=-2.374;VQSLOD=1.2911;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:30:6.01:0,6,56	0/0:3,0:6:9.01:0,9,84	./.	./.	0/0:19,0:23:9.01:0,9,84	0/0:13,0:19:0.77:0,1,42	1/1:16,6:24:7.18:90,7,0	./.	0/1:15,0:16:11.91:12,0,108	1/1:29,0:29:31.88:401,32,0	1/1:9,4:13:2.52:70,3,0	1/1:18,6:24:11.44:163,11,0	1/1:10,5:19:6.53:84,7,0	1/1:15,11:29:11.78:223,12,0	1/1:13,5:21:14.52:235,15,0	0/1:15,6:22:37.22:131,0,37	0/0:11,0:17:12.01:0,12,112	1/1:14,6:22:14.70:238,15,0	0/0:20,0:20:6.01:0,6,85	0/1:21,0:22:3.42:3,0,84	0/0:28,0:26:3:0,3,46	0/0:17,0:19:8.96:0,9,75	0/0:17,0:19:2.68:0,3,28	0/0:15,0:24:18.02:0,18,167	1/1:15,7:24:8.77:153,9,0	0/1:18,6:27:13.48:337,0,13	0/0:11,0:13:8.58:0,9,80	1/1:3,5:11:11.78:223,12,0
chr10	62596390	.	TCCTTCCTCCCTC	T	1502	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.575;DP=595;FS=10.261;HRun=0;HaplotypeScore=201.5673;InbreedingCoeff=0.9958;MQ=69.94;MQ0=7;MQRankSum=-3.352;QD=32.65;ReadPosRankSum=-1.751;VQSLOD=1.4674;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,24:26:33.11:867,33,0	0/0:7,0:7:21.07:0,21,1041	0/0:30,0:19:44.12:0,44,1152	0/0:25,0:17:42.13:0,42,1461	1/1:2,18:20:39:756,39,0	0/0:23,0:23:57.18:0,57,2647	0/0:34,0:34:87.29:0,87,3751	0/0:34,0:33:87.26:0,87,2842	0/0:13,0:13:39.12:0,39,1992	0/0:15,0:15:36.11:0,36,1460	0/0:16,0:16:39.13:0,39,1877	0/0:23,0:23:66.21:0,66,2913	0/0:17,0:17:45.15:0,45,2024	0/0:28,0:28:75.26:0,75,3694	0/0:19,0:19:51.18:0,51,2647	0/0:18,0:18:48.13:0,48,2191	0/0:16,0:16:36.12:0,36,1820	0/0:10,0:10:24.08:0,24,1019	0/0:20,0:20:54.17:0,54,2287	0/0:24,0:24:69.18:0,69,3054	0/0:38,0:38:99:0,102,4648	0/0:14,0:14:36.11:0,36,1915	0/0:11,0:11:30.10:0,30,1524	0/0:37,0:37:98.68:0,99,4820	0/0:12,0:12:36.12:0,36,1683	0/0:26,0:26:69.22:0,69,3265	0/0:27,0:27:69.22:0,69,3379	0/0:11,0:11:30.09:0,30,1446
chr10	62596425	.	TTCTCTCTCTCTCTCTCTCTCTCTCTC	T	2840.11	PASS	AB=0.906;AC=16;AF=0.364;AN=44;BaseQRankSum=5.139;DP=550;FS=1.530;HRun=0;HaplotypeScore=276.2675;InbreedingCoeff=0.2457;MQ=45.76;MQ0=24;MQRankSum=-2.435;QD=14.95;ReadPosRankSum=0.438;VQSLOD=2.2700;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:31:10.83:0,11,685	./.	./.	0/0:46,0:7:2.99:0,3,24	0/0:21,0:21:0:0,0,0	1/1:14,5:19:6.02:402,6,0	./.	0/0:31,0:31:13.34:0,13,207	0/0:14,0:14:3.01:0,3,201	0/1:12,0:12:19.98:20,0,279	1/1:9,3:12:3.01:185,3,0	1/1:13,5:18:9.03:603,9,0	0/1:10,3:12:93.73:194,0,94	1/1:19,3:22:5.69:401,6,0	1/1:14,0:16:3.01:181,3,0	0/1:13,0:17:99:190,0,111	0/0:16,0:15:3.01:0,3,129	0/0:11,0:9:3.01:0,3,71	0/0:13,0:13:2.22:0,2,7	./.	0/1:37,0:34:18.98:19,0,117	./.	0/0:13,0:13:3.01:0,3,246	0/0:35,0:35:27.09:0,27,1881	./.	0/0:22,0:21:11.53:0,12,582	1/1:19,5:24:12.03:784,12,0	0/0:8,0:8:3.01:0,3,71
chr10	62596568	.	GT	G	1234.34	PASS	AB=0.909;AC=5;AF=0.089;AN=56;BaseQRankSum=5.880;DP=628;FS=5.820;HRun=10;HaplotypeScore=77.1050;InbreedingCoeff=0.8495;MQ=69.42;MQ0=0;MQRankSum=-0.805;QD=14.19;ReadPosRankSum=1.662;VQSLOD=3.9606;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,38:43:99:880,102,0	0/0:5,0:5:15.04:0,15,166	0/0:20,0:17:28.97:0,29,314	0/0:10,0:9:12.74:0,13,106	1/1:2,22:24:56.78:476,57,0	0/0:21,0:21:51.13:0,51,557	0/0:26,0:26:69.17:0,69,754	0/0:21,0:21:48.12:0,48,524	0/0:17,0:17:45.09:0,45,481	0/0:31,0:33:89.94:0,90,953	0/0:20,0:20:51.06:0,51,522	0/0:20,0:20:48.11:0,48,514	0/0:19,0:19:48.10:0,48,516	0/0:18,0:18:51.12:0,51,555	0/0:19,0:20:50.97:0,51,545	0/0:27,1:28:46.14:0,46,737	0/0:25,0:25:66.18:0,66,730	0/0:16,0:16:45.12:0,45,498	0/0:24,2:26:37.15:0,37,629	0/1:18,2:20:1:1,0,424	0/0:29,0:29:78.19:0,78,847	0/0:4,0:25:48.62:0,49,268	0/0:8,0:28:48.61:0,49,268	0/0:4,0:22:57.12:0,57,304	0/0:21,0:21:63.06:0,63,679	0/0:27,1:28:75.15:0,75,803	0/0:32,0:32:93.24:0,93,1019	0/0:11,0:11:30.05:0,30,313
chr10	62596816	.	G	GACACACAC	12452.84	PASS	AB=0.648;AC=42;AF=0.778;AN=54;BaseQRankSum=-7.972;DP=720;FS=1.863;HRun=0;HaplotypeScore=213.5486;InbreedingCoeff=0.6351;MQ=56.07;MQ0=17;MQRankSum=-5.842;QD=23.81;ReadPosRankSum=-3.704;VQSLOD=4.0151;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:38:17.88:0,18,189	1/1:3,1:10:5.98:228,6,0	./.	0/0:37,0:14:0.71:0,1,1	0/0:10,0:27:2.78:0,3,173	1/1:12,11:30:20.19:671,20,0	1/1:23,0:25:30.03:810,30,0	1/1:34,0:33:48.40:823,48,0	1/1:11,0:30:32.98:360,33,0	1/1:24,1:26:37.34:790,37,0	1/1:5,7:14:5.95:141,6,0	1/1:21,4:28:41.62:1231,42,0	0/1:7,8:17:10.84:117,0,11	1/1:12,13:29:16.87:556,17,0	1/1:13,12:29:27.44:920,27,0	1/1:22,8:33:53.46:1876,53,0	1/1:11,0:23:15.05:446,15,0	1/1:16,0:16:13.25:457,13,0	1/1:11,0:18:25.18:359,25,0	1/1:13,1:27:9.03:243,9,0	1/1:32,0:31:23.99:293,24,0	0/1:11,0:22:10.57:11,0,168	0/0:11,0:17:19.91:0,20,225	0/0:19,0:46:61.73:0,62,451	1/1:10,3:15:18.05:478,18,0	1/1:18,13:33:36.48:573,36,0	1/1:17,1:21:47.86:797,48,0	1/1:2,6:9:9.02:272,9,0
chr10	62599153	.	TC	T	6677.62	PASS	AB=0.906;AC=44;AF=0.786;AN=56;BaseQRankSum=-7.171;DP=581;FS=0.404;HRun=11;HaplotypeScore=72.7048;InbreedingCoeff=0.6066;MQ=73.95;MQ0=1;MQRankSum=-2.812;QD=14.18;ReadPosRankSum=0.841;VQSLOD=5.1825;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,115,476	0/1:9,1:10:9.68:10,0,97	0/0:17,2:18:4.76:0,5,190	0/1:11,1:11:9.70:10,0,88	0/0:17,0:17:37.92:0,38,164	1/1:6,10:16:29.96:246,30,0	1/1:7,28:35:52.10:633,52,0	0/1:13,2:15:3.54:4,0,171	0/0:7,0:20:8.47:0,8,47	1/1:4,10:14:29.95:246,30,0	1/1:5,8:13:20.95:172,21,0	1/1:6,21:27:37.46:445,37,0	1/1:6,19:25:59.91:492,60,0	1/1:4,14:18:35.95:296,36,0	1/1:4,25:29:68.91:567,69,0	1/1:3,12:15:35.94:296,36,0	0/1:37,4:41:5.56:6,0,700	1/1:3,16:19:44.88:360,45,0	1/1:9,13:22:35.87:289,36,0	1/1:3,9:12:20.95:172,21,0	1/1:11,23:34:56.82:468,57,0	1/1:4,12:16:26.96:221,27,0	1/1:4,6:10:14.97:123,15,0	1/1:7,16:25:54.98:430,55,0	1/1:6,20:26:56.91:468,57,0	1/1:3,9:13:31.04:233,31,0	1/1:4,17:21:50.92:418,51,0	1/1:0,3:3:8.99:74,9,0
chr10	62599160	.	C	CA	2140.72	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-10.466;DP=577;FS=6.586;HRun=0;HaplotypeScore=89.7239;InbreedingCoeff=0.9095;MQ=72.06;MQ0=1;MQRankSum=-2.270;QD=31.02;ReadPosRankSum=4.714;VQSLOD=3.2723;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,51:53:99:1740,129,0	0/0:10,0:10:26.99:0,27,282	0/0:21,0:19:37.73:0,38,388	0/0:9,0:8:17.84:0,18,207	1/1:1,15:16:27.09:521,27,0	0/0:18,0:18:47.60:0,48,343	0/0:36,0:36:99:0,101,721	0/0:16,0:16:35.96:0,36,388	0/0:20,0:20:4.33:0,4,63	0/0:14,0:14:38.54:0,39,264	0/0:12,0:12:32.75:0,33,239	0/0:26,0:26:56.69:0,57,446	0/0:23,0:23:68.18:0,68,459	0/0:20,0:20:53.55:0,54,383	0/0:28,0:28:74.12:0,74,487	0/0:15,0:15:41.59:0,42,288	0/0:41,0:41:99:0,120,1342	0/0:21,0:21:56.47:0,56,398	0/0:16,0:16:44.60:0,45,316	0/0:12,0:12:26.66:0,27,175	0/0:31,0:31:74.22:0,74,515	0/0:14,0:14:29.63:0,30,195	0/0:9,0:9:20.77:0,21,140	0/0:22,0:22:65.26:0,65,446	0/0:28,0:28:74.36:0,74,528	0/0:19,0:19:41.56:0,42,290	0/0:23,0:23:62.27:0,62,431	0/0:4,0:4:11.87:0,12,82
chr10	62599621	.	CT	C	2830.70	PASS	AB=0.733;AC=28;AF=0.500;AN=56;BaseQRankSum=0.247;DP=641;FS=1.778;HRun=14;HaplotypeScore=84.8296;InbreedingCoeff=0.4366;MQ=65.04;MQ0=15;MQRankSum=1.260;QD=7.43;ReadPosRankSum=3.082;VQSLOD=3.0916;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,2:30:27.35:0,27,511	0/0:4,0:13:23.22:0,23,145	0/0:20,0:13:0.29:0,0,94	0/1:21,1:10:21.55:22,0,31	0/0:33,0:35:69.52:0,70,598	1/1:7,14:20:25.20:199,25,0	1/1:8,17:26:25.85:297,26,0	0/0:16,0:31:60.49:0,60,354	0/0:14,0:14:21.02:0,21,195	1/1:6,18:25:8.82:341,9,0	1/1:3,10:13:22.82:162,23,0	1/1:9,21:31:37:238,37,0	0/1:7,2:9:12.55:63,0,13	1/1:14,5:20:13.17:154,13,0	0/1:15,11:25:18.79:161,0,19	1/1:8,11:18:20.78:143,21,0	0/0:15,0:50:55.07:0,55,321	1/1:8,14:22:32.61:202,33,0	0/1:5,9:14:23.87:134,0,24	0/1:11,7:18:10.61:100,0,11	0/1:11,10:23:0.28:127,0,0	0/0:20,1:21:18.08:0,18,285	0/0:22,0:22:29.43:0,29,239	0/0:18,0:17:15.47:0,15,277	0/1:12,13:26:5.98:274,0,6	1/1:8,11:21:39.71:258,40,0	1/1:6,17:23:20.02:121,20,0	0/1:10,2:12:17.74:35,0,18
chr10	62600833	.	ACTTTTTTTTCTTTT	A	2372.13	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.571;DP=552;FS=7.053;HRun=0;HaplotypeScore=206.3120;InbreedingCoeff=0.9773;MQ=65.13;MQ0=8;MQRankSum=-7.177;QD=55.17;ReadPosRankSum=1.455;VQSLOD=2.3755;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:4,13:16:27.81:1088,28,0	0/0:7,0:7:12.04:0,12,662	0/0:19,0:15:18.03:0,18,677	0/0:22,0:17:35.20:0,35,1475	1/1:8,18:26:39.09:1406,39,0	0/0:14,0:14:39:0,39,2352	0/0:16,0:16:42.14:0,42,2651	0/0:29,0:28:75.20:0,75,3915	0/0:14,0:14:36.11:0,36,1873	0/0:23,0:23:42.12:0,42,2628	0/0:18,0:18:48.16:0,48,2909	0/0:16,0:16:42.14:0,42,2697	0/0:15,0:15:39.13:0,39,2618	0/0:21,0:21:60.21:0,60,3616	0/0:27,0:26:72.23:0,72,4284	0/0:15,0:15:36.11:0,36,2049	0/0:33,0:32:93.32:0,93,5554	0/0:30,0:30:75.26:0,75,4841	0/0:22,0:22:48.14:0,48,2748	0/0:13,0:13:36.12:0,36,2315	0/0:25,0:24:58.38:0,58,3262	0/0:20,0:20:57.20:0,57,3590	0/0:11,0:11:33.11:0,33,2210	0/0:18,0:17:45.14:0,45,2716	0/0:11,0:11:21.05:0,21,1116	0/0:22,0:21:51.16:0,51,2847	0/0:28,0:28:72.22:0,72,3908	0/0:20,0:20:60.21:0,60,3797
chr10	62601268	.	AT	A	8107.17	PASS	AB=0.625;AC=51;AF=0.911;AN=56;BaseQRankSum=3.515;DP=504;FS=0.759;HRun=11;HaplotypeScore=56.4121;InbreedingCoeff=0.6114;MQ=66.80;MQ0=1;MQRankSum=-1.138;QD=17.03;ReadPosRankSum=-1.006;VQSLOD=5.3385;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,1:20:37.63:125,38,0	0/1:2,3:5:20:62,0,20	1/1:3,0:3:2.99:24,3,0	0/0:6,0:6:4.19:0,4,13	1/1:3,0:22:36.65:106,37,0	1/1:2,14:17:43.98:351,44,0	1/1:1,13:14:35.95:296,36,0	1/1:7,22:29:33.90:482,34,0	0/0:20,1:21:29.49:0,29,519	1/1:5,24:29:71.90:591,72,0	1/1:2,20:22:27.93:436,28,0	1/1:6,17:24:23.98:392,24,0	1/1:0,15:16:43.99:351,44,0	1/1:2,11:13:26.95:222,27,0	1/1:4,20:24:53.93:443,54,0	1/1:0,5:7:16.06:110,16,0	1/1:3,19:23:52.97:425,53,0	1/1:3,12:16:30.42:247,30,0	1/1:8,14:24:35.96:360,36,0	1/1:2,27:29:74.89:616,75,0	1/1:1,6:7:14.97:123,15,0	1/1:3,21:24:28.29:436,28,0	1/1:3,11:14:23.95:197,24,0	1/1:2,10:14:34.04:258,34,0	1/1:1,8:9:23.97:197,24,0	1/1:2,21:23:59.90:489,60,0	1/1:2,22:25:64.75:523,65,0	1/1:10,11:22:6.47:245,6,0
chr10	62601393	.	TA	T	5649.12	PASS	AB=0.600;AC=51;AF=0.911;AN=56;BaseQRankSum=-2.360;DP=490;FS=2.440;HRun=14;HaplotypeScore=59.8630;InbreedingCoeff=0.6466;MQ=75.51;MQ0=0;MQRankSum=-3.552;QD=12.15;ReadPosRankSum=3.864;VQSLOD=4.9687;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,12:20:8.94:189,9,0	1/1:1,4:6:13.94:88,14,0	0/0:14,0:14:15.83:0,16,123	0/0:11,0:7:5.89:0,6,38	1/1:5,16:26:48.69:296,49,0	1/1:4,16:20:44.62:308,45,0	0/1:5,7:15:0.90:114,0,1	1/1:9,21:31:36.46:388,36,0	1/1:2,17:19:44.63:308,45,0	1/1:7,11:19:5.92:169,6,0	1/1:7,10:18:0.90:142,1,0	1/1:4,12:17:25.80:170,26,0	1/1:2,11:13:32.68:226,33,0	1/1:4,10:16:33.78:217,34,0	1/1:2,17:19:47.61:329,48,0	1/1:1,13:14:35.70:247,36,0	1/1:5,17:25:47.75:305,48,0	1/1:3,11:15:30.05:194,30,0	1/1:3,7:11:22.83:150,23,0	1/1:3,21:24:56.44:390,56,0	1/1:2,4:8:18.95:115,19,0	1/1:4,0:17:26.45:76,26,0	1/1:4,1:25:33.47:109,33,0	1/1:6,0:13:12.19:35,12,0	1/1:4,12:16:32.67:226,33,0	1/1:3,15:22:52.71:332,53,0	1/1:4,15:21:45.66:299,46,0	1/1:1,13:14:32.70:226,33,0
chr10	62602679	.	G	GGA	79.88	PASS	AB=0.500;AC=7;AF=0.70;AN=10;BaseQRankSum=-1.231;DP=9;FS=10.000;HRun=0;HaplotypeScore=15.1122;MQ=147.92;MQ0=2;MQRankSum=-1.231;QD=19.97;ReadPosRankSum=0.358;VQSLOD=1.8691;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,1:1:3.01:47,3,0	1/1:0,1:1:3.01:47,3,0	0/0:4,0:3:5.75:0,6,41	./.	0/1:0,1:1:0:0,0,0	./.	./.	1/1:0,1:1:3.01:58,3,0	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.
chr10	62606932	.	C	CT	2233.44	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-8.454;DP=616;FS=0.520;HRun=2;HaplotypeScore=57.9011;InbreedingCoeff=0.9971;MQ=85.03;MQ0=0;MQRankSum=-1.975;QD=34.36;ReadPosRankSum=0.705;VQSLOD=3.7127;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:96.30:0,96,1188	0/0:6,0:6:18.06:0,18,223	0/0:23,0:23:65.76:0,66,757	0/0:15,0:15:42.04:0,42,469	0/0:17,0:17:51.16:0,51,632	0/0:29,0:29:78.23:0,78,954	0/0:26,0:26:72.23:0,72,893	0/0:31,0:31:87.26:0,87,1057	0/0:15,0:15:45.14:0,45,558	0/0:21,0:21:60.18:0,60,734	0/0:21,0:21:54.16:0,54,657	0/0:23,0:23:63.20:0,63,780	0/0:21,0:21:60.19:0,60,743	0/0:17,0:17:51.16:0,51,632	0/0:26,0:26:75.24:0,75,930	0/0:30,0:30:84.25:0,84,1030	0/0:31,0:31:90.28:0,90,1115	0/0:22,0:22:63.16:0,63,765	0/0:19,0:19:57.18:0,57,705	0/0:24,0:24:66.19:0,66,805	0/0:20,0:20:57.18:0,57,706	1/1:1,20:21:51.17:734,51,0	1/1:0,19:19:48.16:691,48,0	1/1:1,24:25:66.22:951,66,0	0/0:24,0:24:66.21:0,66,818	0/0:25,0:25:72.21:0,72,869	0/0:20,0:19:54.17:0,54,669	0/0:12,0:12:36.11:0,36,446
chr10	62607534	.	GT	G	9845.20	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-4.380;DP=592;FS=19.747;HRun=11;HaplotypeScore=66.3074;InbreedingCoeff=0.8831;MQ=64.43;MQ0=5;MQRankSum=-0.519;QD=17.46;ReadPosRankSum=2.884;VQSLOD=4.0651;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,38:39:83.87:686,84,0	1/1:2,10:13:25.86:202,26,0	0/0:13,0:8:11.86:0,12,105	0/0:15,0:12:9.90:0,10,89	1/1:6,28:35:76.91:622,77,0	1/1:5,12:18:37.99:301,38,0	1/1:4,16:21:40.98:326,41,0	1/1:10,24:30:68.89:566,69,0	1/1:2,17:20:40.99:326,41,0	1/1:1,19:20:47.86:387,48,0	1/1:6,16:22:47.93:393,48,0	1/1:5,19:24:47.93:392,48,0	1/1:1,17:18:44.95:369,45,0	1/1:2,16:18:41.92:345,42,0	1/1:5,19:24:50.93:419,51,0	1/1:1,14:15:41.95:345,42,0	1/1:2,23:24:68.92:566,69,0	1/1:3,27:30:65.89:542,66,0	1/1:6,23:29:68.72:551,69,0	1/1:2,18:20:50.90:414,51,0	1/1:5,8:13:26.69:209,27,0	1/1:2,7:9:17.96:148,18,0	1/1:2,17:19:50.94:419,51,0	1/1:5,16:22:14.51:189,15,0	1/1:8,13:22:5.98:245,6,0	1/1:7,15:22:21.95:300,22,0	1/1:6,20:25:56.86:462,57,0	1/1:1,5:6:14.97:123,15,0
chr10	62609014	.	T	TTCAC	19481.95	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=-13.230;DP=766;FS=0.461;HRun=0;HaplotypeScore=122.7229;InbreedingCoeff=0.9771;MQ=65.86;MQ0=2;MQRankSum=5.086;QD=32.63;ReadPosRankSum=1.444;VQSLOD=5.0314;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:42:63.05:0,63,587	1/1:5,7:12:12.04:252,12,0	0/0:16,0:14:8.41:0,8,85	0/0:16,0:16:24.29:0,24,253	0/0:12,0:30:47.84:0,48,411	1/1:5,13:19:36.12:861,36,0	1/1:19,19:39:33.11:791,33,0	1/1:23,0:23:32.98:525,33,0	1/1:5,20:26:42.14:992,42,0	1/1:10,15:27:51.09:1112,51,0	1/1:8,6:14:18.06:430,18,0	1/1:15,26:43:45.15:1079,45,0	1/1:14,21:36:63:1464,63,0	1/1:12,22:36:51.18:1199,51,0	1/1:9,22:31:42.14:1007,42,0	1/1:13,31:46:35.82:1273,36,0	1/1:14,27:43:48.16:1150,48,0	1/1:5,16:21:30.10:719,30,0	1/1:22,6:28:21.04:406,21,0	1/1:8,11:19:33.11:788,33,0	1/1:11,34:47:72.25:1726,72,0	0/0:6,0:25:48.05:0,48,446	0/0:6,0:15:17.97:0,18,168	0/0:9,0:24:24.02:0,24,222	1/1:2,14:16:30.10:719,30,0	1/1:9,19:29:69.20:1524,69,0	1/1:7,19:28:39.13:891,39,0	1/1:1,10:11:24.08:575,24,0
chr10	62609469	.	AAAACAAAC	A	2133.79	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.680;DP=610;FS=4.208;HRun=0;HaplotypeScore=147.9469;InbreedingCoeff=0.9955;MQ=62.93;MQ0=9;MQRankSum=-6.771;QD=36.17;ReadPosRankSum=-1.377;VQSLOD=3.3377;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,99,4026	1/1:1,7:8:18.01:391,18,0	0/0:33,0:22:27.09:0,27,990	0/0:37,0:25:26.79:0,27,1533	0/0:21,0:21:42.14:0,42,1546	0/0:22,0:22:42.14:0,42,1756	0/0:15,0:15:36.12:0,36,1461	1/1:11,15:26:45.10:1032,45,0	0/0:7,0:16:36.12:0,36,1134	0/0:25,0:24:57.20:0,57,2242	0/0:10,0:10:27.06:0,27,940	0/0:20,0:20:51.18:0,51,2108	0/0:24,0:24:66.23:0,66,2649	0/0:16,0:16:36.12:0,36,1389	0/0:14,0:14:33.11:0,33,1372	0/0:21,0:21:54.18:0,54,2069	1/1:9,16:25:35.83:852,36,0	0/0:21,0:21:42.14:0,42,1607	0/0:20,0:17:39.13:0,39,1407	0/0:21,0:21:51.16:0,51,1724	0/0:29,0:29:78.27:0,78,2977	0/0:19,0:18:39.13:0,39,1494	0/0:17,0:17:33.09:0,33,1184	0/0:15,0:14:42.14:0,42,1633	0/0:20,0:20:54.19:0,54,2186	0/0:29,0:29:78.27:0,78,3068	0/0:32,0:33:69.22:0,69,2612	0/0:16,0:16:48.16:0,48,1928
chr10	62609972	.	C	CT	337.52	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-0.719;DP=577;FS=0.000;HRun=2;HaplotypeScore=60.1655;InbreedingCoeff=0.9945;MQ=92.14;MQ0=0;MQRankSum=-2.078;QD=33.75;ReadPosRankSum=1.234;VQSLOD=3.7291;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,99,1202	0/0:8,0:8:21.04:0,21,245	0/0:22,0:22:63.20:0,63,774	0/0:27,0:27:48.15:0,48,683	0/0:18,0:18:45.13:0,45,545	0/0:23,0:23:60.12:0,60,724	0/0:23,0:23:66.21:0,66,818	0/0:29,0:29:78.10:0,78,910	1/1:0,10:10:30.10:432,30,0	0/0:22,0:22:66.18:0,66,777	0/0:17,0:17:45.08:0,45,516	0/0:19,0:19:54.08:0,54,635	0/0:14,0:14:42.11:0,42,506	0/0:15,0:15:45.13:0,45,545	0/0:28,0:28:84.23:0,84,1003	0/0:19,0:19:57.18:0,57,706	0/0:35,0:35:99:0,99,1186	0/0:12,0:12:33.04:0,33,378	0/0:34,0:34:73.29:0,73,1052	0/0:26,0:26:72.23:0,72,892	0/0:17,0:17:51.11:0,51,592	0/0:13,0:13:33.09:0,33,396	0/0:22,0:22:60.08:0,60,686	0/0:22,0:22:63.14:0,63,750	0/0:12,0:12:33.09:0,33,397	0/0:19,0:19:54.15:0,54,649	0/0:13,0:13:36.10:0,36,434	0/0:24,0:24:69.20:0,69,840
chr10	62610153	.	ATGG	A	2379.83	PASS	AB=0.971;AC=22;AF=0.393;AN=56;BaseQRankSum=1.252;DP=474;FS=6.824;HRun=0;HaplotypeScore=99.5961;InbreedingCoeff=0.1255;MQ=70.87;MQ0=5;MQRankSum=-3.304;QD=8.81;ReadPosRankSum=5.610;VQSLOD=2.0393;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:44.49:0,44,391	0/0:8,0:8:13.79:0,14,65	0/0:34,0:23:12.88:0,13,412	0/0:21,0:11:15.87:0,16,161	0/0:19,0:19:44.24:0,44,368	1/1:22,0:23:1.76:239,2,0	1/1:11,1:12:4.36:186,4,0	0/0:15,0:15:38.99:0,39,284	0/0:9,0:9:24.06:0,24,344	0/1:12,0:12:21.99:83,0,22	0/1:9,0:9:31.10:55,0,31	0/1:10,0:10:1.66:99,0,2	0/1:14,0:14:39.34:114,0,39	0/1:13,1:14:14.49:172,0,14	1/1:22,0:22:14.14:163,14,0	1/1:17,0:17:0.78:183,1,0	0/0:23,0:23:46.91:0,47,254	0/1:15,0:16:6.83:177,0,7	0/1:16,0:16:62.67:97,0,63	0/1:26,0:26:89.67:167,0,90	1/1:17,0:17:9.75:160,10,0	0/0:22,0:21:30.73:0,31,148	0/0:19,0:19:38.69:0,39,181	0/0:13,0:13:25.07:0,25,92	0/1:22,1:23:3.03:197,0,3	0/1:25,0:25:13.05:248,0,13	0/1:7,1:9:0.26:157,0,0	0/1:5,0:5:8.33:52,0,8
chr10	62610155	.	GGT	G	384	PASS	AB=0.976;AC=10;AF=0.179;AN=56;BaseQRankSum=0.672;DP=459;FS=28.813;HRun=0;HaplotypeScore=98.4917;InbreedingCoeff=0.0287;MQ=72.08;MQ0=5;MQRankSum=0.158;QD=2.70;ReadPosRankSum=0.134;VQSLOD=0.5300;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:35.01:0,35,238	0/1:7,1:8:5.97:69,0,6	0/0:39,0:26:24.18:0,24,458	0/1:22,0:11:10.05:10,0,83	0/0:18,0:18:16.56:0,17,212	0/0:20,1:21:12.76:0,13,108	0/1:11,1:12:37.72:38,0,47	0/0:17,0:17:6.09:0,6,189	0/0:8,0:8:23.66:0,24,239	0/0:12,0:12:29.10:0,29,147	0/0:8,0:8:11.74:0,12,68	0/0:9,0:9:12.38:0,12,65	0/0:14,0:14:21.49:0,21,111	0/0:15,0:15:1.92:0,2,75	0/0:21,0:21:37.03:0,37,151	0/0:17,0:17:26.57:0,27,118	0/1:22,0:22:63.29:79,0,63	0/0:16,1:17:4.16:0,4,83	0/0:13,0:13:12.20:0,12,112	0/0:24,0:24:38.41:0,38,198	0/0:17,0:17:23.38:0,23,95	0/1:20,0:19:20.11:84,0,20	0/1:17,0:17:37.41:64,0,37	1/1:12,1:13:30.13:139,30,0	0/1:19,0:19:3.60:4,0,88	0/0:25,0:25:41.13:0,41,229	0/1:9,0:9:29.11:42,0,29	0/0:5,0:5:11.32:0,11,49
chr10	62610157	.	TGGG	T	6794.60	PASS	AB=0.625;AC=33;AF=0.589;AN=56;BaseQRankSum=-10.443;DP=492;FS=44.805;HRun=11;HaplotypeScore=91.0162;InbreedingCoeff=0.8819;MQ=75.74;MQ0=5;MQRankSum=-3.378;QD=24.35;ReadPosRankSum=4.360;VQSLOD=0.4306;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:17:37.13:0,37,288	0/0:2,0:8:7.48:0,7,16	0/0:43,0:30:24.10:0,24,657	0/0:24,0:13:16.78:0,17,281	0/0:5,0:18:34.12:0,34,268	1/1:3,19:22:45.14:590,45,0	1/1:3,11:14:27.08:340,27,0	0/0:13,0:19:16.47:0,16,95	0/0:8,0:9:27.04:0,27,435	1/1:3,9:13:27.06:353,27,0	1/1:3,9:12:12.03:157,12,0	0/1:6,9:15:52.89:240,0,53	1/1:4,11:15:7.08:295,7,0	1/1:4,11:15:26.09:387,26,0	1/1:1,20:21:42.02:513,42,0	1/1:4,16:20:22.13:492,22,0	0/0:5,0:23:22.19:0,22,86	1/1:2,15:17:33.10:429,33,0	1/1:6,8:14:23.64:294,24,0	1/1:6,18:25:38.80:490,39,0	1/1:0,16:16:33.11:434,33,0	0/0:5,0:17:15.61:0,16,44	0/0:5,0:18:14.95:0,15,33	0/0:1,0:14:14.95:0,15,32	1/1:3,17:20:39.06:491,39,0	1/1:4,22:26:69.18:860,69,0	1/1:3,6:9:21.07:273,21,0	1/1:1,4:5:12.02:157,12,0
chr10	62615359	.	CT	C	1699.58	PASS	AB=0.630;AC=31;AF=0.574;AN=54;BaseQRankSum=-1.453;DP=353;FS=30.362;HRun=12;HaplotypeScore=32.9392;InbreedingCoeff=0.5707;MQ=51.51;MQ0=18;MQRankSum=4.125;QD=8.17;ReadPosRankSum=2.167;VQSLOD=0.1650;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:32.40:0,32,212	0/0:3,0:3:0.47:0,0,1	0/0:11,0:2:3:0,3,27	./.	0/0:11,0:11:2.69:0,3,8	1/1:4,12:16:26.87:209,27,0	1/1:3,21:20:34.89:261,35,0	0/0:27,0:18:23.98:0,24,212	0/0:12,0:10:11.97:0,12,111	1/1:0,5:4:11.95:93,12,0	1/1:1,5:7:11.95:93,12,0	1/1:5,9:13:8.04:68,8,0	1/1:3,6:9:5.95:46,6,0	0/1:8,10:15:21.56:37,0,22	1/1:0,5:5:8.97:70,9,0	1/1:3,3:5:5.97:46,6,0	0/0:24,2:19:12.79:0,13,300	0/1:3,11:16:5.94:107,0,6	1/1:7,9:15:26.80:204,27,0	1/1:2,3:5:4.90:44,5,0	1/1:7,16:20:26.87:209,27,0	0/0:7,0:5:2.97:0,3,20	0/0:6,0:4:0:0,0,0	0/0:11,0:8:11.49:0,11,73	0/1:7,7:12:2.68:78,0,3	1/1:4,7:11:18.86:147,19,0	1/1:2,5:6:11.78:87,12,0	1/1:4,3:8:10.99:76,11,0
chr10	62615569	.	CTTT	C	878.08	PASS	AB=0.863;AC=28;AF=0.667;AN=42;BaseQRankSum=-5.010;DP=213;FS=3.963;HRun=4;HaplotypeScore=28.4861;InbreedingCoeff=0.2714;MQ=75.63;MQ0=36;MQRankSum=-1.786;QD=9.98;ReadPosRankSum=1.017;VQSLOD=-0.7597;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	1/1:1,0:1:3.01:41,3,0	0/0:48,0:14:32.23:0,32,536	0/0:53,0:13:20.89:0,21,274	./.	1/1:2,3:3:3.01:49,3,0	1/1:4,0:4:8.55:59,9,0	1/1:10,0:4:5.90:40,6,0	0/0:3,0:4:2.52:0,3,56	1/1:0,0:2:2.96:19,3,0	0/0:1,3:3:2.97:0,3,20	1/1:4,0:4:6.73:36,7,0	1/1:4,1:3:4.26:41,4,0	1/1:1,2:3:6.02:91,6,0	0/1:2,1:3:1.30:51,0,1	./.	1/1:8,1:6:11.11:99,11,0	0/1:5,2:6:8.02:132,0,8	0/0:6,0:4:0.89:0,1,2	./.	0/1:9,0:5:2.50:156,0,3	./.	./.	0/1:11,0:8:17.44:17,0,42	1/1:2,3:4:3.01:50,3,0	1/1:2,1:3:5.91:38,6,0	1/1:1,2:2:6.02:90,6,0	./.
chr10	62615676	.	C	CT	1791.01	PASS	AB=0.977;AC=37;AF=0.661;AN=56;BaseQRankSum=-3.057;DP=454;FS=34.084;HRun=12;HaplotypeScore=69.0686;InbreedingCoeff=-0.1643;MQ=50.12;MQ0=51;MQRankSum=1.234;QD=4.41;ReadPosRankSum=-1.312;VQSLOD=-0.6585;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:42,1:40:87.85:188,0,88	1/1:5,1:5:8.36:51,8,0	0/0:26,0:3:7.85:0,8,41	0/0:13,0:3:5.65:0,6,33	0/1:19,0:20:3.08:87,0,3	0/1:11,0:10:14.71:15,0,32	0/1:16,1:13:51.95:54,0,52	1/1:11,3:8:20.58:165,21,0	0/0:8,0:6:0.89:0,1,90	1/1:8,0:8:8.55:62,9,0	1/1:5,0:5:1.62:30,2,0	0/1:10,0:9:19.97:37,0,20	1/1:7,0:7:0.04:22,0,0	0/1:12,0:10:26.83:30,0,27	1/1:3,0:3:5.36:22,5,0	1/1:7,0:4:8.38:40,8,0	0/1:46,12:44:5.85:484,0,6	1/1:33,1:33:1.97:180,2,0	0/1:14,0:8:8.84:9,0,24	1/1:11,0:11:4.67:50,5,0	0/1:16,1:15:25.05:80,0,25	0/1:6,0:5:6.87:7,0,52	0/1:12,0:9:6:6,0,34	0/1:40,0:32:23.52:24,0,197	1/1:17,0:15:15.19:111,15,0	1/1:6,1:7:2.81:60,3,0	0/1:17,0:16:9.37:49,0,9	1/1:9,0:8:16.83:81,17,0
chr10	62615688	.	T	TC	5391.38	PASS	AB=0.716;AC=37;AF=0.661;AN=56;BaseQRankSum=-7.695;DP=482;FS=58.400;HRun=6;HaplotypeScore=60.5873;InbreedingCoeff=-0.3242;MQ=52.02;MQ0=39;MQRankSum=1.952;QD=11.72;ReadPosRankSum=-1.996;VQSLOD=-0.4105;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:29,19:43:49.58:801,50,0	1/1:3,4:7:7.57:76,8,0	0/0:22,0:3:6.92:0,7,37	0/1:13,0:3:0.65:1,0,40	1/1:5,16:21:33.95:381,34,0	0/1:5,2:7:50.67:51,0,109	0/1:12,10:19:99:123,0,148	1/1:15,2:13:26.64:194,27,0	0/1:9,0:7:7.93:8,0,104	0/1:6,4:9:54.60:118,0,55	0/1:2,4:6:21.18:61,0,21	1/1:4,6:9:12.04:144,12,0	0/1:7,1:8:18.09:73,0,18	0/1:4,9:13:18.34:91,0,18	1/1:1,2:3:6.02:72,6,0	1/1:2,7:6:9.03:108,9,0	1/1:34,14:46:44.07:678,44,0	0/1:13,26:37:99:542,0,118	1/1:2,6:7:15.01:144,15,0	0/1:5,7:11:39.78:159,0,40	0/1:9,9:16:99:210,0,112	0/1:4,1:6:33.24:33,0,76	0/1:12,2:14:10.51:84,0,11	0/1:25,10:36:99:476,0,99	0/1:7,11:16:51.51:319,0,52	0/1:4,4:8:12.13:123,0,12	0/1:8,9:17:96.89:120,0,97	1/1:2,6:9:18.03:203,18,0
chr10	62616843	.	G	GCAAA	3809.25	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=-9.827;DP=628;FS=4.068;HRun=0;HaplotypeScore=107.8763;InbreedingCoeff=0.9279;MQ=63.03;MQ0=6;MQRankSum=1.682;QD=25.74;ReadPosRankSum=1.678;VQSLOD=3.3376;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:44.22:0,44,349	0/0:6,0:6:12.04:0,12,193	0/0:24,0:18:5.94:0,6,66	0/1:27,0:18:0:0,0,0	0/0:27,0:27:53.66:0,54,402	0/0:18,0:18:33.07:0,33,482	0/0:24,0:25:39.12:0,39,605	0/0:38,0:38:51.12:0,51,652	1/1:10,11:20:21.05:450,21,0	0/0:23,0:22:36.06:0,36,530	0/0:16,0:16:36.06:0,36,529	0/0:27,0:27:60.15:0,60,892	0/0:14,0:14:27.05:0,27,361	0/0:18,0:18:36.08:0,36,547	0/0:25,0:25:51.08:0,51,693	0/0:18,0:18:30.09:0,30,461	0/0:42,0:42:78.18:0,78,1140	0/0:15,0:15:29.99:0,30,365	1/1:9,11:20:38.99:742,39,0	1/1:10,14:23:39.06:835,39,0	1/1:10,12:22:27.09:611,27,0	0/0:19,0:19:38.51:0,39,289	0/0:18,0:18:23.71:0,24,194	0/0:30,0:30:47.38:0,47,339	0/0:18,0:18:42.14:0,42,671	0/0:24,0:24:42.13:0,42,653	1/1:15,19:34:51.17:1171,51,0	0/0:6,0:6:15.04:0,15,219
chr10	62616868	.	C	CA	2476.29	PASS	AB=0.965;AC=16;AF=0.286;AN=56;BaseQRankSum=-0.446;DP=628;FS=2.096;HRun=10;HaplotypeScore=77.2895;InbreedingCoeff=0.4015;MQ=68.66;MQ0=11;MQRankSum=-0.034;QD=9.75;ReadPosRankSum=2.823;VQSLOD=2.8273;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:10,21:31:6.15:499,6,0	0/0:5,0:5:14.98:0,15,123	0/0:40,0:22:25.56:0,26,195	0/1:27,0:16:34.62:35,0,63	1/1:4,20:25:16.72:571,17,0	0/0:18,0:18:47.94:0,48,394	0/0:25,0:25:62.80:0,63,501	0/0:42,1:42:79.85:0,80,636	0/1:14,0:13:30.32:30,0,49	0/0:15,1:15:9.96:0,10,288	0/0:21,1:22:25.42:0,25,412	0/0:32,0:32:86.76:0,87,702	0/0:16,0:16:38.83:0,39,311	0/0:15,0:15:44.78:0,45,356	0/0:21,1:22:14.93:0,15,312	0/0:16,0:16:14.72:0,15,271	0/0:36,0:35:65.50:0,65,663	0/0:15,0:16:31.37:0,31,246	0/1:24,1:27:77.90:78,0,200	0/1:19,0:18:50.66:51,0,123	0/1:13,0:16:23.75:67,0,24	1/1:5,16:21:24.36:456,24,0	1/1:4,9:13:5.08:231,5,0	1/1:2,26:28:32.56:550,33,0	0/0:18,0:18:50.79:0,51,402	0/0:23,1:24:34.25:0,34,485	0/1:31,0:31:88.36:88,0,130	0/0:9,0:9:6.83:0,7,155
chr10	62617741	.	G	GGGGTCCCA	42511.60	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-7.377;DP=751;FS=0.000;HRun=0;HaplotypeScore=148.6333;InbreedingCoeff=0.8570;MQ=70.60;MQ0=0;MQRankSum=-9.125;QD=60.04;ReadPosRankSum=5.828;VQSLOD=4.6591;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,18:40:51.18:2172,51,0	1/1:5,6:14:21.07:893,21,0	0/0:26,0:26:4.29:0,4,1392	0/0:17,0:17:27.07:0,27,522	1/1:5,11:20:27.09:1054,27,0	1/1:5,12:21:36.59:1531,37,0	1/1:8,12:32:30.10:1275,30,0	1/1:12,10:37:69.20:2217,69,0	1/1:6,13:27:36.12:1533,36,0	1/1:7,12:25:45.14:1602,45,0	1/1:3,9:16:27.09:1055,27,0	1/1:9,34:51:93.12:3910,93,0	1/1:8,23:35:66.23:2790,66,0	1/1:6,16:28:45.15:1885,45,0	1/1:10,25:37:66.23:2811,66,0	1/1:12,18:34:48.16:2045,48,0	1/1:17,11:32:30.10:1094,30,0	1/1:6,8:16:21.07:895,21,0	1/1:13,7:23:30.25:1299,30,0	1/1:5,14:25:42.14:1782,42,0	1/1:15,13:36:21.54:833,22,0	1/1:5,14:23:39.13:1659,39,0	1/1:7,9:19:30.10:1232,30,0	1/1:11,9:26:16.04:641,16,0	1/1:6,14:24:39.13:1655,39,0	1/1:7,15:32:59.69:2219,60,0	1/1:9,17:30:51.18:2171,51,0	1/1:2,3:5:6.02:256,6,0
chr10	62621637	.	GC	G	11653.09	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=18.067;DP=729;FS=0.330;HRun=1;HaplotypeScore=165.3121;InbreedingCoeff=0.9962;MQ=85.79;MQ0=0;MQRankSum=-6.157;QD=20.16;ReadPosRankSum=5.817;VQSLOD=4.9221;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,126,2005	1/1:13,0:13:38.49:261,38,0	0/0:23,0:23:57.25:0,57,1034	0/0:23,0:23:69.21:0,69,1027	0/0:28,0:28:81.26:0,81,1269	1/1:27,0:27:67.86:441,68,0	1/1:32,0:32:61.61:526,62,0	1/1:22,1:23:51.38:399,51,0	0/0:34,0:34:80.34:0,80,1534	1/1:27,0:27:67.45:432,67,0	1/1:16,0:16:47.27:308,47,0	1/1:26,0:26:45.97:428,46,0	1/1:27,0:27:68.02:458,68,0	1/1:29,0:29:80.14:567,80,0	1/1:30,0:30:88.75:598,89,0	1/1:32,0:32:82.70:543,83,0	1/1:37,0:37:99:711,107,0	1/1:22,0:22:56.04:364,56,0	1/1:20,0:20:55.80:361,56,0	1/1:21,0:21:59.54:438,60,0	1/1:29,0:29:79.62:517,80,0	1/1:0,28:28:78.25:1004,78,0	1/1:0,24:24:72.23:926,72,0	1/1:1,21:22:60.19:777,60,0	1/1:16,0:16:44.32:292,44,0	1/1:33,0:33:66.95:535,67,0	1/1:39,0:39:97.52:650,98,0	1/1:5,0:5:14.92:118,15,0
chr10	62621638	.	CA	C	22019.46	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=16.894;DP=726;FS=1.076;HRun=1;HaplotypeScore=129.0976;InbreedingCoeff=0.9963;MQ=85.93;MQ0=0;MQRankSum=-5.884;QD=38.36;ReadPosRankSum=5.422;VQSLOD=4.2530;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,126,1983	1/1:0,13:13:39.13:544,39,0	0/0:23,0:23:62.41:0,62,1050	0/0:24,0:24:72.20:0,72,1076	0/0:27,0:27:78.27:0,78,1246	1/1:0,27:27:69.23:963,69,0	1/1:0,31:31:84.28:1169,84,0	1/1:1,22:23:65.94:864,66,0	0/0:34,1:35:63.42:0,63,1562	1/1:1,27:28:84.10:1076,84,0	1/1:0,16:16:48.16:669,48,0	1/1:1,24:25:69.23:952,69,0	1/1:0,27:27:69.23:958,69,0	1/1:0,29:29:81.27:1129,81,0	1/1:0,30:30:90.30:1256,90,0	1/1:0,32:32:84.28:1172,84,0	1/1:0,37:37:99:1507,108,0	1/1:0,22:22:57.19:795,57,0	1/1:0,19:19:57.19:785,57,0	1/1:0,21:21:60.20:837,60,0	1/1:0,29:29:81.27:1127,81,0	1/1:28,0:28:78.25:1004,78,0	1/1:24,0:24:72.23:926,72,0	1/1:21,0:21:60.19:777,60,0	1/1:0,16:16:45.15:628,45,0	1/1:0,32:32:96.28:1296,96,0	1/1:0,39:39:99:1379,99,0	1/1:0,5:5:15.05:208,15,0
chr10	62622923	.	CCA	C	2259.84	PASS	AB=0.929;AC=7;AF=0.125;AN=56;BaseQRankSum=10.040;DP=766;FS=3.003;HRun=0;HaplotypeScore=89.2199;InbreedingCoeff=0.8398;MQ=88.87;MQ0=0;MQRankSum=-0.874;QD=25.11;ReadPosRankSum=0.338;VQSLOD=4.5390;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:59,0:59:99:0,175,3090	0/0:8,0:8:18.06:0,18,324	0/0:23,0:23:49.96:0,50,1053	0/0:35,0:35:93.24:0,93,1507	0/0:27,0:27:78.27:0,78,1396	0/0:30,0:30:87.30:0,87,1548	0/0:30,0:30:84.27:0,84,1482	0/0:27,0:27:75.26:0,75,1343	0/0:22,0:22:60.16:0,60,1018	0/0:22,0:22:63.17:0,63,1094	0/0:22,0:22:66.23:0,66,1189	0/0:24,0:24:72.25:0,72,1285	0/0:29,0:29:81.28:0,81,1458	0/0:29,0:29:81.28:0,81,1458	0/0:38,0:38:99:0,102,1810	0/0:27,0:27:78.27:0,78,1405	0/0:52,0:52:99:0,157,2809	0/1:24,2:26:13.97:14,0,1033	0/0:17,0:17:45.15:0,45,810	0/0:29,0:29:87.30:0,87,1567	0/0:33,0:33:81.24:0,81,1416	1/1:3,19:22:57.19:798,57,0	1/1:1,10:11:30.10:419,30,0	1/1:2,29:31:84.28:1176,84,0	0/0:23,0:23:66.23:0,66,1180	0/0:23,0:23:66.23:0,66,1181	0/0:36,0:36:99:0,99,1782	0/0:11,0:11:33.11:0,33,593
chr10	62625519	.	GAT	G	244.86	PASS	AB=0.732;AC=9;AF=0.321;AN=28;BaseQRankSum=-0.508;DP=218;FS=2.997;HRun=0;HaplotypeScore=35.2163;InbreedingCoeff=0.0444;MQ=72.62;MQ0=7;MQRankSum=-1.911;QD=2.35;ReadPosRankSum=1.075;VQSLOD=1.3042;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:9,0:9:7.79:0,8,31	./.	./.	0/0:6,0:6:0:0,0,0	./.	1/1:3,0:3:0.47:1,0,0	0/1:22,1:33:16.17:16,0,32	0/1:6,2:8:0.96:37,0,1	./.	./.	./.	./.	./.	0/0:6,0:6:2.96:0,3,19	0/0:4,0:4:1.82:0,2,5	0/1:17,5:22:25.75:128,0,26	0/1:13,6:17:5.74:119,0,6	./.	./.	./.	./.	0/1:3,0:7:0:0,0,0	1/1:6,2:7:3.01:33,3,0	0/0:5,0:5:3:0,3,26	./.	0/0:8,0:8:3.01:0,3,39	0/0:5,0:5:3.01:0,3,38
chr10	62625550	.	ATG	A	550.97	PASS	AB=1.000;AC=31;AF=0.596;AN=52;BaseQRankSum=0.051;DP=177;FS=0.000;HRun=0;HaplotypeScore=30.6581;InbreedingCoeff=0.4162;MQ=53.14;MQ0=12;MQRankSum=0.605;QD=6.33;ReadPosRankSum=-0.414;VQSLOD=2.3852;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,0:2:0.47:1,0,0	0/0:3,0:3:9.01:0,9,92	./.	./.	1/1:4,0:3:5.99:50,6,0	1/1:2,0:2:5.99:50,6,0	1/1:1,0:1:3:25,3,0	0/0:40,0:33:35.97:0,36,379	0/0:11,0:10:15.94:0,16,165	1/1:4,0:4:10.26:87,10,0	1/1:2,0:2:3:25,3,0	0/0:9,0:8:20.98:0,21,175	0/0:4,0:4:11.22:0,11,97	1/1:4,0:4:11.99:100,12,0	1/1:4,0:4:11.03:80,11,0	1/1:0,8:8:2.97:20,3,0	0/1:16,0:14:1.72:2,0,191	0/1:15,0:12:27.63:28,0,113	1/1:3,0:3:1.47:17,1,0	1/1:2,0:1:3:25,3,0	1/1:3,0:2:2.98:22,3,0	0/0:3,0:3:8:0,8,51	0/0:8,0:7:5.99:0,6,49	0/0:7,0:6:2.65:0,3,65	0/1:9,0:9:56.81:57,0,71	1/1:1,0:1:2.96:19,3,0	1/1:6,0:6:2.95:107,3,0	0/0:2,0:2:2.54:0,3,18
chr10	62626211	.	AG	A	14157.83	PASS	AB=0.876;AC=54;AF=0.964;AN=56;BaseQRankSum=-1.960;DP=624;FS=22.235;HRun=6;HaplotypeScore=182.5349;InbreedingCoeff=-0.0389;MQ=48.04;MQ0=12;MQRankSum=-1.355;QD=22.69;ReadPosRankSum=2.972;VQSLOD=2.6266;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,27:30:87.80:911,88,0	1/1:1,4:5:15.04:161,15,0	0/1:39,8:15:45.65:46,0,142	0/1:39,5:13:35.29:77,0,35	1/1:2,13:15:45.11:479,45,0	1/1:5,19:24:54.13:579,54,0	1/1:5,27:32:75.18:805,75,0	1/1:8,13:20:33.08:355,33,0	1/1:4,17:21:57.13:600,57,0	1/1:4,18:22:54.13:578,54,0	1/1:1,13:14:39.10:419,39,0	1/1:4,22:26:60.15:644,60,0	1/1:1,21:22:66.14:698,66,0	1/1:5,20:25:60.15:643,60,0	1/1:4,30:34:93.22:991,93,0	1/1:2,16:18:48.10:504,48,0	1/1:3,18:21:54.09:568,54,0	1/1:2,10:12:33.04:342,33,0	1/1:6,13:19:39.09:419,39,0	1/1:2,12:14:36.09:386,36,0	1/1:5,18:23:45.09:474,45,0	1/1:1,15:16:48.12:515,48,0	1/1:2,9:11:21.05:225,21,0	1/1:5,21:26:60.13:636,60,0	1/1:6,17:23:54.13:579,54,0	1/1:5,20:25:63.14:668,63,0	1/1:2,23:25:69.15:731,69,0	1/1:7,2:9:12.02:128,12,0
chr10	62626217	.	GA	G	4506.07	PASS	AB=0.995;AC=51;AF=0.911;AN=56;BaseQRankSum=-0.792;DP=596;FS=17.977;HRun=1;HaplotypeScore=233.6748;InbreedingCoeff=0.1108;MQ=46.29;MQ0=8;MQRankSum=1.197;QD=7.56;ReadPosRankSum=8.815;VQSLOD=-0.3124;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:31,0:31:77.48:351,77,0	1/1:5,1:6:1.31:75,1,0	0/1:42,0:14:0.30:0,0,151	0/1:38,1:14:4.22:4,0,47	1/1:16,0:16:39.05:187,39,0	1/1:24,0:24:32.16:196,32,0	1/1:30,0:30:11.86:189,12,0	0/1:22,0:20:46.66:47,0,82	1/1:22,0:22:1.89:180,2,0	0/1:21,0:21:12.15:149,0,12	1/1:15,0:15:18.79:132,19,0	1/1:24,0:24:22.83:236,23,0	1/1:23,0:23:27.18:239,27,0	1/1:23,0:23:24.56:226,25,0	1/1:30,0:30:77.35:340,77,0	1/1:18,0:18:22.67:150,23,0	1/1:21,0:21:25.78:153,26,0	1/1:13,0:13:6.68:88,7,0	1/1:14,0:14:29.09:111,29,0	1/1:12,1:13:32.36:159,32,0	1/1:22,0:22:33.47:159,33,0	1/1:16,0:16:40.68:178,41,0	1/1:11,0:11:3.67:68,4,0	1/1:27,0:27:23.01:218,23,0	1/1:19,1:20:44.43:185,44,0	1/1:20,0:20:49.85:213,50,0	0/1:28,0:28:3.98:214,0,4	1/1:5,0:5:11.19:60,11,0
chr10	62626233	.	AG	A	1009.27	PASS	AB=0.963;AC=7;AF=0.125;AN=56;BaseQRankSum=2.565;DP=542;FS=7.553;HRun=6;HaplotypeScore=264.5365;InbreedingCoeff=0.8238;MQ=47.91;MQ0=2;MQRankSum=0.436;QD=13.46;ReadPosRankSum=0.505;VQSLOD=0.1657;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:26:56.93:0,57,786	0/0:5,0:5:12.04:0,12,158	0/0:22,0:11:16.77:0,17,128	0/1:25,1:12:11.34:11,0,49	0/0:16,0:16:33.02:0,33,421	0/0:23,0:23:54.17:0,54,702	0/0:25,0:25:66.16:0,66,845	0/0:23,0:21:36.04:0,36,427	0/0:21,0:21:54.18:0,54,708	0/0:22,0:22:54.17:0,54,693	0/0:12,0:12:30.05:0,30,368	0/0:27,0:27:69.21:0,69,889	0/0:25,0:25:60.20:0,60,787	0/0:28,0:28:75.24:0,75,980	0/0:27,0:27:66.17:0,66,840	0/0:19,0:19:45.14:0,45,577	0/0:15,0:15:20.97:0,21,240	0/0:13,0:13:33.11:0,33,430	0/0:18,0:18:45.15:0,45,585	0/0:13,0:13:32.98:0,33,416	0/0:18,0:18:36:0,36,455	1/1:3,13:16:39.08:409,39,0	1/1:1,7:8:21.05:224,21,0	1/1:4,21:25:48.11:513,48,0	0/0:14,0:14:39.13:0,39,509	0/0:21,0:21:57.19:0,57,749	0/0:29,0:29:75.24:0,75,964	0/0:5,0:5:12.04:0,12,158
chr10	62626246	.	GC	G	16959.78	PASS	AB=0.879;AC=54;AF=0.964;AN=56;BaseQRankSum=-1.832;DP=490;FS=0.000;HRun=1;HaplotypeScore=198.5950;InbreedingCoeff=-0.0283;MQ=45.25;MQ0=0;MQRankSum=-3.564;QD=34.61;ReadPosRankSum=2.753;VQSLOD=4.3757;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,17:20:48.70:611,49,0	1/1:0,7:7:21.07:292,21,0	0/1:16,1:9:21.14:21,0,61	0/1:15,1:9:27.12:27,0,86	1/1:0,12:12:30.10:414,30,0	1/1:2,19:21:60.15:795,60,0	1/1:1,19:20:60.19:816,60,0	1/1:0,16:14:33.11:461,33,0	1/1:0,21:21:63.21:879,63,0	1/1:0,20:20:60.20:838,60,0	1/1:0,11:11:24.08:335,24,0	1/1:3,23:26:72.21:981,72,0	1/1:0,21:21:60.20:833,60,0	1/1:2,30:31:87.23:1172,87,0	1/1:1,25:26:66.22:906,66,0	1/1:0,20:20:54.18:753,54,0	1/1:1,9:10:18.02:229,18,0	1/1:1,9:10:30.10:415,30,0	1/1:1,13:14:42.14:583,42,0	1/1:2,12:14:42.13:559,42,0	1/1:2,13:15:39.11:516,39,0	1/1:0,15:15:42.14:576,42,0	1/1:1,8:9:27.08:359,27,0	1/1:2,20:22:54.14:730,54,0	1/1:0,15:15:39.13:539,39,0	1/1:0,21:21:63.21:880,63,0	1/1:0,29:29:84.28:1169,84,0	1/1:1,6:7:21.06:273,21,0
chr10	62626261	.	AG	A	16001.54	PASS	AB=0.870;AC=54;AF=0.964;AN=56;BaseQRankSum=-2.599;DP=578;FS=1.218;HRun=3;HaplotypeScore=201.1247;InbreedingCoeff=-0.0374;MQ=49.38;MQ0=2;MQRankSum=-2.287;QD=27.68;ReadPosRankSum=3.830;VQSLOD=4.0290;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,19:24:31.72:543,32,0	1/1:1,7:8:21.07:260,21,0	0/1:21,4:14:99:104,0,117	0/1:25,4:11:53.67:54,0,139	1/1:1,23:24:51.16:631,51,0	1/1:3,21:24:54.17:668,54,0	1/1:1,16:17:48.15:593,48,0	1/1:2,21:22:54.12:656,54,0	1/1:0,21:21:63.20:780,63,0	1/1:3,18:21:55.98:659,56,0	1/1:1,10:11:27.08:334,27,0	1/1:0,31:31:78.20:944,78,0	1/1:2,22:24:59.98:742,60,0	1/1:1,29:29:78.24:964,78,0	1/1:1,23:24:60.19:741,60,0	1/1:3,18:21:51.16:627,51,0	1/1:0,12:12:24.07:293,24,0	1/1:1,13:14:39.59:481,40,0	1/1:1,14:15:42.12:510,42,0	1/1:1,15:15:39.12:482,39,0	1/1:2,21:23:42.13:519,42,0	1/1:1,15:16:42.13:520,42,0	1/1:1,12:13:30.09:371,30,0	1/1:0,24:24:60.19:743,60,0	1/1:0,15:15:39.12:483,39,0	1/1:4,24:28:72.22:892,72,0	1/1:4,31:35:84.26:1038,84,0	1/1:0,10:10:30.09:370,30,0
chr10	62626358	.	T	TAC	1441.14	PASS	AB=0.984;AC=22;AF=0.393;AN=56;BaseQRankSum=6.998;DP=657;FS=0.925;HRun=0;HaplotypeScore=151.3007;InbreedingCoeff=-0.1962;MQ=59.85;MQ0=6;MQRankSum=-5.073;QD=3.11;ReadPosRankSum=2.005;VQSLOD=2.5346;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:13.86:0,14,199	0/1:7,0:7:4.80:5,0,19	0/0:16,0:11:29.46:0,29,389	0/0:17,0:9:17.03:0,17,287	0/0:17,0:17:5.91:0,6,87	0/1:20,0:20:28.24:28,0,74	0/0:21,0:21:9.36:0,9,106	0/1:43,0:43:13.03:13,0,286	0/1:19,0:19:15.67:16,0,74	0/1:26,0:26:84.80:85,0,273	0/1:17,0:17:6.52:7,0,77	0/1:35,0:35:12.36:12,0,350	0/1:21,1:22:44.16:44,0,267	0/1:22,0:22:13.27:13,0,33	0/1:20,1:21:19.54:20,0,235	0/0:27,0:27:10.16:0,10,195	1/1:32,0:32:22.77:117,23,0	1/1:21,0:21:33.10:130,33,0	0/1:17,2:17:99:128,0,192	0/1:25,1:26:99:177,0,275	0/1:39,0:39:73.29:73,0,452	0/0:19,0:18:11.79:0,12,115	0/0:20,0:19:7.74:0,8,213	0/0:30,0:27:21.24:0,21,240	0/1:26,0:26:99:125,0,223	0/1:27,0:27:13.04:281,0,13	0/1:26,1:26:76.23:76,0,191	1/1:15,0:15:34.35:263,34,0
chr10	62626360	.	T	TCACAC	5058.22	PASS	AB=0.706;AC=23;AF=0.411;AN=56;BaseQRankSum=6.585;DP=670;FS=3.073;HRun=0;HaplotypeScore=170.1542;InbreedingCoeff=-0.4986;MQ=57.64;MQ0=7;MQRankSum=0.008;QD=9.62;ReadPosRankSum=8.060;VQSLOD=3.2636;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:28:62.99:63,0,119	0/1:1,0:8:11.64:12,0,63	0/0:16,0:10:28.89:0,29,383	0/0:17,0:9:20.63:0,21,325	0/0:6,0:18:8.34:0,8,92	0/1:4,0:21:59.27:147,0,59	0/1:2,0:22:63.55:115,0,64	0/0:8,0:43:81.64:0,82,1053	0/1:2,2:21:57.61:274,0,58	0/1:20,0:25:99:268,0,147	0/1:3,0:17:63.62:114,0,64	0/1:23,0:32:99:370,0,115	0/1:16,0:22:99:160,0,171	0/1:3,0:24:10.77:263,0,11	0/1:15,0:21:99:177,0,113	0/1:6,0:27:99:228,0,128	0/1:4,0:32:2.61:123,0,3	1/1:1,0:24:38.18:228,38,0	0/1:18,0:17:72.03:206,0,72	0/1:20,0:25:99:318,0,130	0/1:27,0:42:99:598,0,192	0/1:15,0:19:4.35:4,0,131	0/0:7,0:20:30.59:0,31,309	0/0:19,0:26:48.53:0,49,365	0/1:19,0:25:88.89:350,0,89	0/1:22,0:28:99:403,0,181	0/1:11,0:26:99:511,0,100	0/1:12,0:15:32.97:126,0,33
chr10	62626379	.	G	GCACA	3890.84	PASS	AB=0.998;AC=24;AF=0.429;AN=56;BaseQRankSum=11.221;DP=688;FS=6.531;HRun=0;HaplotypeScore=167.1343;InbreedingCoeff=-0.4412;MQ=54.74;MQ0=9;MQRankSum=0.087;QD=7.29;ReadPosRankSum=11.074;VQSLOD=0.5382;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:21,3:24:12.51:216,13,0	0/1:6,0:6:1.87:2,0,82	0/0:16,0:6:9:0,9,103	0/0:23,0:14:21.71:0,22,364	1/1:13,4:17:17.73:178,18,0	0/1:21,0:23:44.04:114,0,44	0/1:20,0:20:81.03:81,0,121	0/0:39,0:40:89.94:0,90,1045	0/1:20,0:20:64.05:132,0,64	0/1:30,0:30:86.95:87,0,316	0/1:16,0:16:86.78:87,0,111	0/1:29,0:30:74.98:386,0,75	0/1:18,0:18:99:113,0,164	0/1:29,0:29:99:274,0,126	0/1:21,0:21:64.72:137,0,65	0/1:22,0:22:10.34:215,0,10	0/1:29,0:29:83.07:101,0,83	0/1:25,0:25:89.53:129,0,90	0/1:30,0:27:80.45:80,0,253	0/1:25,0:25:99:149,0,176	0/1:47,0:47:99:440,0,368	0/0:22,0:21:44.48:0,44,396	0/0:19,0:18:35.21:0,35,305	0/0:32,0:29:59.38:0,59,598	0/1:27,0:27:99:273,0,116	0/1:30,0:30:99:168,0,297	0/1:31,0:31:99:493,0,165	0/1:13,0:13:32.36:37,0,32
chr10	62627798	.	G	GA	1426.55	PASS	AB=0.918;AC=17;AF=0.304;AN=56;BaseQRankSum=-3.492;DP=509;FS=5.876;HRun=13;HaplotypeScore=69.1924;InbreedingCoeff=0.5712;MQ=66.95;MQ0=0;MQRankSum=-0.335;QD=8.34;ReadPosRankSum=-0.546;VQSLOD=2.5255;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,10:13:9.01:84,9,0	0/0:13,1:15:9.86:0,10,204	0/0:14,0:10:8.33:0,8,45	0/1:4,0:3:0:0,0,0	1/1:15,17:35:77.21:638,77,0	0/0:17,0:18:37.66:0,38,252	0/0:5,0:6:13.90:0,14,88	0/0:32,2:37:20.96:0,21,397	1/1:6,6:12:20.72:227,21,0	0/0:22,0:22:16.79:0,17,242	0/1:26,1:30:7.86:8,0,241	0/1:16,3:19:17.07:17,0,187	0/0:17,0:17:11.77:0,12,201	0/0:16,0:16:26.47:0,26,180	0/0:18,1:21:1.24:0,1,249	0/0:17,0:19:1.27:0,1,207	0/0:20,0:24:12.05:0,12,178	0/0:15,0:15:23.71:0,24,164	0/0:10,0:12:21.91:0,22,135	0/0:27,2:30:17.67:0,18,401	0/1:7,2:9:8.82:9,0,67	1/1:6,6:14:23.54:182,24,0	1/1:3,12:16:12.29:245,12,0	1/1:1,8:9:21.02:195,21,0	0/0:21,0:21:47.45:0,47,327	0/0:19,0:20:34.59:0,35,230	0/0:29,2:31:40.52:0,41,424	0/1:10,0:10:1.88:2,0,120
chr10	62629508	.	A	AT	24754.34	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-7.646;DP=655;FS=19.425;HRun=2;HaplotypeScore=59.6899;InbreedingCoeff=0.9948;MQ=81.25;MQ0=0;MQRankSum=-9.234;QD=40.32;ReadPosRankSum=5.575;VQSLOD=2.7578;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,40:42:99:1555,108,0	1/1:0,8:8:24.08:346,24,0	0/0:22,0:22:60.19:0,60,736	0/0:19,0:19:42.13:0,42,520	1/1:1,21:22:60.20:864,60,0	1/1:0,24:24:66.22:951,66,0	1/1:0,19:19:57.19:821,57,0	1/1:0,24:24:69.23:994,69,0	1/1:1,26:27:72.24:1037,72,0	1/1:1,25:26:78.26:1113,78,0	1/1:0,20:20:60.20:864,60,0	1/1:0,24:24:69.23:994,69,0	1/1:2,21:23:63.21:906,63,0	1/1:0,35:35:99:1512,105,0	1/1:0,22:22:63.21:907,63,0	1/1:0,24:24:69.23:994,69,0	1/1:0,27:27:81.27:1167,81,0	1/1:2,18:20:51.17:734,51,0	1/1:1,15:16:45.13:625,45,0	1/1:0,18:18:54.18:778,54,0	1/1:1,30:31:84.28:1210,84,0	1/1:2,24:26:66.22:942,66,0	1/1:0,20:20:57.02:820,57,0	1/1:0,26:26:69.23:994,69,0	1/1:2,27:29:78.26:1123,78,0	1/1:0,31:31:87.29:1253,87,0	1/1:1,23:24:69.23:993,69,0	1/1:0,6:6:18.06:259,18,0
chr10	62634464	.	AACACACCCACCCACCCACCAC	A	5049.52	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=10.806;DP=647;FS=8.303;HRun=0;HaplotypeScore=321.1508;InbreedingCoeff=0.9756;MQ=79.50;MQ0=6;MQRankSum=-6.378;QD=55.49;ReadPosRankSum=-0.965;VQSLOD=2.8100;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:75.26:0,75,6033	1/1:0,18:18:27.09:1556,27,0	0/0:62,0:43:44.94:0,45,3697	0/0:62,0:37:41.11:0,41,2258	0/0:14,0:14:39.12:0,39,3308	0/0:23,0:23:65.24:0,65,4855	0/0:37,0:37:99:0,102,7769	1/1:2,32:34:95.98:1764,96,0	0/0:16,0:16:45.15:0,45,3983	0/0:17,0:17:48.16:0,48,4001	0/0:8,0:8:21.07:0,21,2096	0/0:24,0:24:63.22:0,63,5433	0/0:17,0:17:45.15:0,45,3402	0/0:22,0:22:54.16:0,54,4060	0/0:19,0:19:54.17:0,54,4700	0/0:20,0:20:60.21:0,60,5265	1/1:1,14:15:21.07:1213,21,0	1/1:2,22:24:9.03:517,9,0	0/0:13,0:13:33.06:0,33,2552	0/0:17,0:17:48.10:0,48,3894	0/0:44,0:43:99:0,114,9087	0/0:20,0:20:49.41:0,49,4211	0/0:25,0:25:63.22:0,63,5621	0/0:11,0:11:33.11:0,33,2896	0/0:9,0:9:15.05:0,15,1058	0/0:28,0:28:72.22:0,72,5616	0/0:9,0:9:24.07:0,24,1821	0/0:11,0:11:27.08:0,27,1594
chr10	62634630	.	TC	T	3448.08	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=10.745;DP=702;FS=9.029;HRun=1;HaplotypeScore=66.4220;InbreedingCoeff=0.9891;MQ=77.07;MQ0=0;MQRankSum=-0.631;QD=38.31;ReadPosRankSum=1.699;VQSLOD=4.0165;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,41:42:99:1688,123,0	0/0:18,0:18:54.16:0,54,813	0/0:14,0:14:40.34:0,40,541	0/0:19,0:19:54.18:0,54,807	1/1:0,25:25:75.17:1005,75,0	0/0:20,0:20:60.19:0,60,931	0/0:24,0:24:72.22:0,72,1093	0/0:25,0:25:75.25:0,75,1169	1/1:0,23:23:54.18:755,54,0	0/0:36,0:36:99:0,108,1706	0/0:17,0:17:51.17:0,51,815	0/0:21,0:21:60.19:0,60,934	0/0:26,0:26:75.20:0,75,1106	0/0:28,0:28:81.28:0,81,1292	0/0:40,0:40:99:0,117,1818	0/0:36,0:36:99:0,108,1679	0/0:19,0:19:54.10:0,54,808	0/0:24,0:24:72.25:0,72,1149	0/0:21,0:21:60.16:0,60,852	0/0:17,0:17:48.16:0,48,762	0/0:33,0:33:96.31:0,96,1510	0/0:25,0:25:75.26:0,75,1194	0/0:24,0:24:72.23:0,72,1122	0/0:26,0:26:75.22:0,75,1146	0/0:30,0:30:90.30:0,90,1413	0/0:32,0:32:93.32:0,93,1486	0/0:33,0:33:99:0,99,1490	0/0:4,0:4:12.04:0,12,187
chr10	62635478	.	AC	A	1196.08	PASS	AB=0.800;AC=11;AF=0.196;AN=56;BaseQRankSum=-4.943;DP=312;FS=1.347;HRun=10;HaplotypeScore=53.6578;InbreedingCoeff=0.4806;MQ=83.47;MQ0=1;MQRankSum=-0.125;QD=11.61;ReadPosRankSum=5.126;VQSLOD=2.7698;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:11.75:0,12,60	1/1:2,6:8:5.65:52,6,0	0/0:20,0:18:10.73:0,11,195	0/0:18,0:15:11.01:0,11,98	0/0:7,0:7:5.84:0,6,34	0/0:7,0:7:9.32:0,9,74	0/0:15,0:17:23.58:0,24,141	0/1:15,5:20:13.96:114,0,14	1/1:9,0:9:7.01:19,7,0	0/0:6,0:6:11.86:0,12,107	0/0:3,0:3:3.46:0,3,25	0/0:6,0:9:5.83:0,6,39	0/0:17,0:17:24.75:0,25,148	0/0:6,0:6:14.50:0,14,96	0/0:10,0:10:14.57:0,15,104	0/0:3,0:11:2.77:0,3,24	1/1:3,22:28:75.08:612,75,0	1/1:8,21:29:37.63:543,38,0	0/0:5,0:5:5.80:0,6,34	0/0:6,0:6:6.22:0,6,46	0/0:13,0:13:5.98:0,6,46	0/0:2,0:2:2.99:0,3,24	0/0:5,0:5:6.06:0,6,27	0/0:2,0:8:2.80:0,3,13	0/0:2,0:6:1.40:0,1,12	1/1:8,0:9:0.47:1,0,0	0/0:11,0:13:24.40:0,24,164	0/0:4,0:4:4.69:0,5,24
chr10	62635487	.	CCG	C	36.18	PASS	AB=1.000;AC=10;AF=0.179;AN=56;BaseQRankSum=0.968;DP=309;FS=30.837;HRun=0;HaplotypeScore=57.3112;InbreedingCoeff=-0.0615;MQ=75.49;MQ0=1;MQRankSum=-2.685;QD=0.31;ReadPosRankSum=-1.857;VQSLOD=-0.5473;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:14,0:14:7.08:7,0,115	0/1:8,0:8:13.66:14,0,22	0/0:11,0:10:19.38:0,19,197	0/1:19,0:18:2.44:2,0,65	0/0:7,0:7:6.54:0,7,62	0/0:5,0:5:4.15:0,4,71	0/1:17,0:17:4.09:4,0,155	0/0:11,0:11:6.72:0,7,94	1/1:4,5:9:11.95:93,12,0	0/0:10,0:10:22.82:0,23,192	0/0:5,0:5:5.93:0,6,46	0/0:7,0:7:7.31:0,7,38	0/1:15,0:15:15.75:16,0,183	0/0:7,0:7:11.98:0,12,128	0/0:10,0:10:0.69:0,1,138	0/0:10,0:10:2.71:0,3,24	0/0:31,0:31:22.59:0,23,235	0/0:31,0:31:55.94:0,56,297	0/0:3,0:3:6.01:0,6,59	0/1:6,0:6:15.53:16,0,49	0/0:14,0:13:5.91:0,6,73	0/0:3,0:3:2.94:0,3,25	0/0:4,0:4:2.54:0,3,26	0/0:9,0:9:11.82:0,12,79	0/0:9,0:9:11.41:0,11,108	0/1:11,0:11:7.98:8,0,59	0/1:18,0:18:1.47:1,0,291	0/0:5,0:5:7.23:0,7,75
chr10	62636344	.	G	GTA	1283.57	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=-7.690;DP=343;FS=2.545;HRun=0;HaplotypeScore=40.1909;InbreedingCoeff=0.6712;MQ=72.89;MQ0=1;MQRankSum=2.217;QD=25.67;ReadPosRankSum=2.174;VQSLOD=4.1805;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,13:17:33.11:552,33,0	0/0:10,0:10:30.10:0,30,382	0/0:7,0:5:3.01:0,3,38	0/0:12,0:7:4.56:0,5,39	1/1:2,14:16:36.12:602,36,0	0/0:18,0:18:39.12:0,39,496	0/0:4,0:4:12.04:0,12,152	0/0:29,0:29:57.17:0,57,699	1/1:1,6:7:15.05:251,15,0	0/0:14,0:14:42.13:0,42,534	0/1:10,0:10:23.49:23,0,208	0/0:8,0:8:21.07:0,21,267	0/0:17,0:17:39.12:0,39,496	0/0:6,0:6:12.04:0,12,150	0/0:8,0:8:24.08:0,24,305	0/0:10,0:10:24.08:0,24,305	0/0:23,0:23:60.17:0,60,746	0/0:27,0:27:63.13:0,63,767	0/0:9,0:9:21.07:0,21,267	0/0:9,0:9:21.07:0,21,267	0/0:11,0:11:27.09:0,27,344	0/0:1,0:1:3.01:0,3,38	0/0:2,0:2:6.02:0,6,76	0/0:8,0:8:21.07:0,21,266	0/0:13,0:13:33.11:0,33,419	0/0:13,0:13:33.11:0,33,420	0/0:14,0:14:42.13:0,42,534	0/0:20,0:20:60.10:0,60,701
chr10	62636926	.	CT	C	910.50	PASS	AB=0.913;AC=14;AF=0.250;AN=56;BaseQRankSum=4.981;DP=505;FS=0.000;HRun=13;HaplotypeScore=69.1266;InbreedingCoeff=0.7137;MQ=61.60;MQ0=12;MQRankSum=2.574;QD=5.73;ReadPosRankSum=4.252;VQSLOD=2.1147;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:16,18:35:40.85:397,41,0	0/0:5,0:5:8.63:0,9,87	0/0:12,1:7:6.27:0,6,66	0/1:16,0:9:4.94:5,0,65	1/1:12,19:32:48.88:354,49,0	0/0:12,0:11:29.97:0,30,274	0/0:15,1:16:15.71:0,16,297	0/0:36,1:37:31.04:0,31,584	1/1:4,5:9:20.79:148,21,0	0/0:18,1:21:20.43:0,20,325	0/0:19,1:19:12.70:0,13,274	0/1:13,2:15:35.73:36,0,148	0/0:12,0:12:17.50:0,17,170	0/0:12,1:13:7.78:0,8,245	0/0:13,1:14:13.82:0,14,281	0/0:11,0:10:20.07:0,20,181	0/0:28,2:27:16.11:0,16,464	0/0:25,0:21:48.08:0,48,467	0/0:19,1:18:11.28:0,11,330	0/0:15,1:16:11.24:0,11,244	0/0:7,0:8:8.80:0,9,63	1/1:3,0:19:29.44:86,29,0	1/1:4,0:16:2.99:23,3,0	1/1:4,0:13:14.23:41,14,0	0/0:13,1:15:19.43:0,19,312	0/0:28,0:28:61.48:0,61,557	0/0:8,0:10:21.48:0,21,171	0/0:17,0:17:25.86:0,26,238
chr10	62637086	.	TGC	T	1452.34	PASS	AB=1.000;AC=27;AF=0.540;AN=50;BaseQRankSum=-1.820;DP=391;FS=3.809;HRun=0;HaplotypeScore=67.7291;InbreedingCoeff=0.6850;MQ=78.24;MQ0=9;MQRankSum=2.556;QD=7.49;ReadPosRankSum=-0.073;VQSLOD=2.5606;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:25:26.80:0,27,317	0/0:12,0:12:20.63:0,21,158	0/0:11,0:11:2.06:0,2,17	0/0:12,0:10:0.51:0,1,3	0/0:10,0:10:8.80:0,9,64	0/0:13,0:13:0:0,0,0	0/1:22,0:22:0.01:0,0,0	0/1:25,0:23:0:0,0,131	1/1:10,0:10:11.20:79,11,0	1/1:8,0:6:11.98:104,12,0	./.	1/1:8,0:7:17.93:141,18,0	1/1:6,0:6:6:51,6,0	1/1:16,0:16:17.96:144,18,0	1/1:8,0:8:17.97:145,18,0	1/1:5,0:5:6.37:42,6,0	0/0:43,0:42:81.68:0,82,643	0/0:21,0:18:32.78:0,33,257	1/1:10,0:9:9:78,9,0	./.	1/1:18,0:17:29.96:245,30,0	0/0:14,0:14:20.82:0,21,149	0/0:9,0:9:17.62:0,18,110	0/1:22,0:22:10.12:10,0,144	1/1:11,0:10:17.98:149,18,0	1/1:19,0:19:45.02:403,45,0	1/1:6,0:6:5.89:37,6,0	./.
chr10	62637099	.	GCGCACA	G	2228.76	PASS	AB=0.909;AC=29;AF=0.558;AN=52;BaseQRankSum=-3.079;DP=456;FS=0.544;HRun=0;HaplotypeScore=95.0545;InbreedingCoeff=0.4932;MQ=63.54;MQ0=17;MQRankSum=0.910;QD=8.95;ReadPosRankSum=-0.473;VQSLOD=1.7789;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:30:26.57:0,27,316	0/0:11,0:11:24.50:0,24,456	0/0:5,0:5:2.92:0,3,18	0/0:7,0:5:0.51:0,1,3	0/1:12,0:12:48.92:58,0,49	0/1:3,16:18:0.16:0,0,0	0/0:4,27:30:0.03:0,0,0	0/0:21,0:17:6.02:0,6,214	0/1:11,0:15:10.77:37,0,11	1/1:13,0:9:20.92:225,21,0	1/1:11,0:11:3.01:45,3,0	1/1:12,0:10:17.93:180,18,0	1/1:2,1:7:6.02:126,6,0	1/1:24,0:23:18.43:144,18,0	1/1:14,0:14:23.99:233,24,0	1/1:2,0:8:5.91:70,6,0	0/0:37,0:36:95.37:0,95,1640	0/0:25,0:22:38.84:0,39,506	1/1:8,0:11:10.29:112,10,0	./.	1/1:24,0:23:21:293,21,0	0/1:18,0:15:2.83:3,0,161	0/1:15,0:15:21.91:22,0,151	0/0:23,0:23:41.29:0,41,287	1/1:13,0:12:23.51:241,24,0	1/1:21,2:23:47.38:535,47,0	1/1:3,5:7:1.78:77,2,0	./.
chr10	62637101	.	GCACACA	G	771.66	PASS	AB=0.948;AC=23;AF=0.479;AN=48;BaseQRankSum=-0.125;DP=466;FS=5.999;HRun=0;HaplotypeScore=100.6098;InbreedingCoeff=0.1793;MQ=60.45;MQ0=18;MQRankSum=2.395;QD=3.06;ReadPosRankSum=-0.924;VQSLOD=1.2331;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:24,10:31:0:0,0,0	0/0:13,0:12:21.53:0,22,482	./.	./.	1/1:13,0:14:6.02:120,6,0	0/1:19,0:18:0.16:0,0,0	0/0:30,1:30:0.03:0,0,0	0/0:23,0:19:18.06:0,18,367	0/0:13,0:14:11.63:0,12,98	0/1:11,0:9:8.41:72,0,8	1/1:12,0:12:5.86:38,6,0	0/1:11,0:9:6.98:38,0,7	1/1:8,0:8:6.02:103,6,0	0/0:22,0:21:2.92:0,3,17	1/1:14,0:14:6.01:82,6,0	1/1:8,0:8:3.01:50,3,0	0/0:35,0:36:54.66:0,55,1424	0/0:27,0:24:18.06:0,18,394	1/1:12,0:10:2:71,2,0	./.	0/1:26,0:24:20.25:20,0,47	0/1:21,0:18:41.19:41,0,62	0/1:14,0:15:14.32:14,0,83	0/0:13,0:23:14.83:0,15,141	1/1:12,0:11:6.92:62,7,0	0/1:24,0:24:18.32:164,0,18	0/1:8,0:7:25.12:41,0,25	./.
chr10	62637609	.	GT	G	1697.22	PASS	AC=6;AF=0.115;AN=52;BaseQRankSum=7.952;DP=685;FS=19.944;HRun=3;HaplotypeScore=60.1175;InbreedingCoeff=0.9983;MQ=39.62;MQ0=68;MQRankSum=-4.624;QD=20.21;ReadPosRankSum=0.967;VQSLOD=2.1892;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,32:28:42.09:502,42,0	0/0:15,0:14:30.08:0,30,397	./.	./.	1/1:1,21:21:51.16:631,51,0	0/0:29,0:26:54.17:0,54,749	0/0:15,0:13:39.13:0,39,554	0/0:35,0:35:99:0,99,1404	1/1:1,24:22:57.18:705,57,0	0/0:20,0:15:45.15:0,45,648	0/0:29,0:27:57.19:0,57,819	0/0:28,0:25:54.17:0,54,758	0/0:27,0:25:63.17:0,63,852	0/0:27,0:25:45.15:0,45,646	0/0:30,0:27:45.15:0,45,647	0/0:32,0:31:78.25:0,78,1104	0/0:32,0:27:51.17:0,51,733	0/0:34,0:28:57.16:0,57,792	0/0:33,0:23:66.22:0,66,950	0/0:25,0:23:54.18:0,54,776	0/0:29,0:19:51.15:0,51,714	0/0:16,0:14:30.10:0,30,431	0/0:15,0:12:30.10:0,30,431	0/0:25,0:15:24.08:0,24,345	0/0:23,0:20:45.15:0,45,647	0/0:28,0:20:57.15:0,57,797	0/0:34,0:30:69.23:0,69,990	0/0:20,0:11:27.09:0,27,384
chr10	62640059	.	C	CA	511.79	PASS	AB=0.917;AC=7;AF=0.125;AN=56;BaseQRankSum=-4.340;DP=536;FS=6.658;HRun=10;HaplotypeScore=58.2035;InbreedingCoeff=0.8011;MQ=82.73;MQ0=0;MQRankSum=-0.488;QD=10.24;ReadPosRankSum=-0.388;VQSLOD=2.1575;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,128,1036	0/0:9,0:9:17.97:0,18,148	0/0:21,0:23:20.96:0,21,244	0/0:11,1:12:9.41:0,9,72	0/0:30,1:31:43.21:0,43,559	0/0:20,0:20:47.91:0,48,394	0/0:5,0:5:11.99:0,12,99	0/0:25,0:25:53.89:0,54,439	0/0:13,0:13:35.96:0,36,296	0/0:26,0:26:62.85:0,63,511	0/0:21,0:22:52.95:0,53,425	0/0:21,0:21:53.81:0,54,434	0/0:23,0:23:53.90:0,54,443	0/0:11,0:12:31.96:0,32,246	0/0:21,0:21:56.91:0,57,468	0/0:24,0:24:59.90:0,60,490	0/0:28,1:29:45.86:0,46,575	0/0:36,0:36:89.86:0,90,735	0/0:17,0:17:38.94:0,39,319	0/1:20,2:22:10.32:10,0,314	0/0:5,0:5:14.98:0,15,123	1/1:0,6:6:15.04:160,15,0	1/1:1,15:16:30.06:311,30,0	1/1:0,5:6:17.88:174,18,0	0/0:18,0:18:41.94:0,42,342	0/0:14,0:14:35.96:0,36,296	0/0:28,0:28:71.88:0,72,588	0/0:4,0:4:11.99:0,12,99
chr10	62640460	.	G	GA	1034.53	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=4.936;DP=519;FS=5.119;HRun=7;HaplotypeScore=76.2085;InbreedingCoeff=0.9550;MQ=49.99;MQ0=17;MQRankSum=-5.585;QD=18.81;ReadPosRankSum=0.696;VQSLOD=3.3605;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:23:0,23,235	0/0:15,0:15:39.04:0,39,370	0/0:24,0:6:14.88:0,15,141	0/0:14,0:3:6.01:0,6,57	0/0:23,0:23:23.98:0,24,232	0/0:11,0:11:30.04:0,30,284	0/0:26,0:26:42.05:0,42,404	0/0:25,0:25:63.04:0,63,598	0/0:15,0:15:39.01:0,39,367	0/0:20,0:20:48.06:0,48,460	0/0:20,0:19:39.05:0,39,375	0/0:25,0:22:57.09:0,57,550	0/0:18,0:18:45.06:0,45,433	0/0:14,0:14:36.06:0,36,347	0/0:21,0:21:54.08:0,54,521	0/0:15,0:15:39.06:0,39,376	0/0:30,0:29:82.84:0,83,768	0/0:17,0:17:34.95:0,35,371	0/0:13,0:13:36.05:0,36,347	0/0:20,0:20:45.07:0,45,434	0/0:15,0:14:35.98:0,36,336	1/1:3,13:16:31.34:366,31,0	1/1:7,14:21:36.72:409,37,0	1/1:6,12:18:34.66:402,35,0	0/0:17,0:15:33.05:0,33,318	0/0:19,0:19:42.06:0,42,406	0/0:16,0:16:39.05:0,39,377	0/0:10,0:9:24.04:0,24,232
chr10	62640485	.	A	AAAACAAACAAAC	5147.21	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=2.677;DP=575;FS=2.486;HRun=0;HaplotypeScore=182.2166;InbreedingCoeff=0.9820;MQ=53.80;MQ0=6;MQRankSum=-8.092;QD=43.99;ReadPosRankSum=-0.079;VQSLOD=4.7618;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:0,24:29:24.08:1369,24,0	0/0:16,0:16:39.13:0,39,1202	0/0:30,0:11:17.74:0,18,383	0/0:18,0:10:18.93:0,19,429	1/1:4,23:30:38.98:1731,39,0	0/0:16,0:16:42.14:0,42,1194	0/0:16,0:16:33.07:0,33,689	0/0:29,0:29:60.16:0,60,1189	0/0:2,0:16:13.99:0,14,32	0/0:19,0:19:42.14:0,42,1321	0/0:16,0:16:45.15:0,45,1373	0/0:20,0:21:54.17:0,54,1610	0/0:20,0:20:57.17:0,57,1692	0/0:18,0:18:39.11:0,39,933	0/0:24,0:24:66.20:0,66,1994	0/0:16,0:16:42.14:0,42,1400	0/0:33,0:32:55.20:0,55,1920	0/0:20,0:20:49.88:0,50,1346	0/0:20,0:18:36.10:0,36,798	0/0:22,0:22:48.13:0,48,1231	0/0:15,0:15:36.10:0,36,1006	1/1:11,0:19:40.51:649,41,0	1/1:12,0:20:49.01:874,49,0	1/1:12,0:19:16.51:524,17,0	0/0:18,0:18:43.73:0,44,1286	0/0:23,0:23:63.21:0,63,1891	0/0:19,0:19:57.20:0,57,1701	0/0:11,0:11:12.42:0,12,460
chr10	62640504	.	A	AC	328.64	PASS	AB=0.915;AC=6;AF=0.107;AN=56;BaseQRankSum=9.869;DP=580;FS=0.000;HRun=0;HaplotypeScore=80.2642;InbreedingCoeff=-0.1122;MQ=65.91;MQ0=1;MQRankSum=-5.653;QD=2.83;ReadPosRankSum=-0.130;VQSLOD=2.3881;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:24:17.14:17,0,56	0/0:16,0:16:48.14:0,48,640	0/0:27,0:19:50.78:0,51,636	0/0:22,0:17:42.13:0,42,560	0/1:23,0:23:27.51:28,0,95	0/0:19,0:19:57.18:0,57,779	0/0:21,0:21:57.18:0,57,774	0/0:25,0:25:75.23:0,75,1003	0/1:16,0:16:24.42:24,0,46	0/0:19,0:19:57.18:0,57,758	0/0:21,0:21:63.18:0,63,858	0/0:21,0:21:63.13:0,63,825	0/0:24,0:24:72.19:0,72,946	0/0:16,0:16:48.16:0,48,658	0/0:27,0:27:81.25:0,81,1087	0/0:18,0:18:54.18:0,54,755	0/0:31,0:31:67.28:0,67,1132	0/0:20,0:20:57.82:0,58,732	0/0:24,0:23:66.20:0,66,884	0/0:17,0:17:51.17:0,51,712	0/0:15,0:15:45.08:0,45,559	0/1:14,3:17:99:127,0,318	0/1:12,9:21:99:248,0,280	0/1:14,1:15:2.87:3,0,321	0/0:20,0:20:60.18:0,60,795	0/0:25,0:25:72.23:0,72,991	0/0:28,0:28:84.23:0,84,1113	0/0:8,0:8:18.06:0,18,251
chr10	62641142	.	A	AAAG	7313.49	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-10.909;DP=633;FS=1.238;HRun=0;HaplotypeScore=90.1183;InbreedingCoeff=0.9925;MQ=89.04;MQ0=0;MQRankSum=-4.599;QD=57.14;ReadPosRankSum=0.933;VQSLOD=6.5962;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,9:10:27.09:612,27,0	0/0:4,0:4:12.04:0,12,200	0/0:18,0:18:48.12:0,48,756	0/0:30,0:30:69.15:0,69,1078	1/1:2,34:36:99:2208,99,0	0/0:28,0:28:78.24:0,78,1241	0/0:24,0:24:62.68:0,63,1091	0/0:36,0:35:96.33:0,96,1597	1/1:2,20:23:57.20:1291,57,0	0/0:28,0:28:78.27:0,78,1299	0/0:27,0:27:81.24:0,81,1316	0/0:18,0:18:54.18:0,54,900	0/0:19,0:19:48.16:0,48,798	0/0:18,0:18:54.18:0,54,900	0/0:19,0:19:54.17:0,54,875	0/0:24,0:24:66.23:0,66,1100	0/0:7,0:7:21.07:0,21,350	0/0:21,0:21:63.22:0,63,1044	0/0:37,0:37:99:0,105,1749	0/0:28,0:28:75.26:0,75,1250	0/0:27,0:27:81.28:0,81,1341	1/1:3,20:23:63.22:1412,63,0	1/1:2,23:26:57.08:1211,57,0	1/1:1,9:10:27.09:580,27,0	0/0:22,0:22:66.23:0,66,1098	0/0:25,0:25:66.23:0,66,1098	0/0:30,0:30:87.30:0,87,1449	0/0:15,0:15:45.15:0,45,750
chr10	62643099	.	C	CG	1162.83	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-0.243;DP=768;FS=20.400;HRun=3;HaplotypeScore=75.2835;InbreedingCoeff=0.9877;MQ=66.68;MQ0=1;MQRankSum=1.109;QD=35.24;ReadPosRankSum=1.892;VQSLOD=1.8300;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,102,1206	0/0:12,0:12:36.11:0,36,431	0/0:14,0:13:33.07:0,33,386	0/0:16,0:17:21.06:0,21,397	0/0:41,0:41:99:0,111,1327	0/0:21,0:21:54.15:0,54,636	0/0:32,0:32:84.24:0,84,994	0/0:39,0:39:99:0,102,1191	1/1:2,31:33:90.30:1258,90,0	0/0:21,0:21:57.17:0,57,683	0/0:23,0:23:69.20:0,69,815	0/0:29,0:29:75.23:0,75,897	0/0:31,0:31:78.22:0,78,920	0/0:28,0:28:66.20:0,66,791	0/0:34,0:34:93.28:0,93,1115	0/0:33,0:33:87.20:0,87,1011	0/0:30,0:30:87.20:0,87,1013	0/0:29,0:29:69.12:0,69,795	0/0:17,0:17:45.13:0,45,530	0/0:31,0:31:87.27:0,87,1043	0/0:31,0:30:84.19:0,84,969	0/0:25,0:25:72.21:0,72,845	0/0:25,0:25:69.18:0,69,802	0/0:34,0:33:87.24:0,87,1021	0/0:21,0:21:63.18:0,63,743	0/0:22,0:22:60.17:0,60,710	0/0:49,0:48:99:0,123,1460	0/0:6,0:6:18.06:0,18,216
chr10	62645528	.	GAGTAAA	G	5207.57	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=12.925;DP=581;FS=4.052;HRun=0;HaplotypeScore=137.6741;InbreedingCoeff=0.9913;MQ=79.75;MQ0=0;MQRankSum=-12.796;QD=55.40;ReadPosRankSum=-0.172;VQSLOD=4.7904;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,11:13:27.05:563,27,0	0/0:5,0:5:15.05:0,15,517	0/0:19,0:19:39.54:0,40,941	0/0:23,0:23:45.21:0,45,1062	1/1:3,20:23:60.21:1321,60,0	0/0:33,0:33:90.31:0,90,3045	0/0:8,0:8:21.07:0,21,696	0/0:26,0:26:66.21:0,66,1995	1/1:4,14:18:42.14:949,42,0	0/0:37,0:37:99:0,102,3356	0/0:28,0:28:75.26:0,75,2441	0/0:19,0:19:54.18:0,54,1789	0/0:20,0:20:60.21:0,60,2059	0/0:22,0:22:60.19:0,60,1851	0/0:34,0:34:90.31:0,90,3017	0/0:17,0:17:51.18:0,51,1749	0/0:12,0:12:36.12:0,36,1240	0/0:19,0:19:57.17:0,57,1826	0/0:14,0:14:30.10:0,30,942	0/0:35,0:35:99:0,99,3395	0/0:16,0:16:45.15:0,45,1532	1/1:2,12:14:42.13:889,42,0	1/1:3,15:18:48.16:1083,48,0	1/1:1,7:8:18.06:403,18,0	0/0:29,0:29:84.27:0,84,2696	0/0:29,0:29:78.26:0,78,2608	0/0:36,0:36:99:0,108,3683	0/0:6,0:6:15.94:0,16,519
chr10	62645597	.	C	CT	3175.05	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=14.776;DP=599;FS=24.527;HRun=7;HaplotypeScore=72.7933;InbreedingCoeff=0.9173;MQ=64.29;MQ0=2;MQRankSum=-1.457;QD=23.52;ReadPosRankSum=0.299;VQSLOD=2.0065;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,12:14:33.98:422,34,0	0/0:7,0:7:21.03:0,21,203	0/1:17,0:9:2.94:24,0,3	0/0:9,0:6:8.94:0,9,67	1/1:6,27:33:79.95:924,80,0	0/0:27,0:27:66.07:0,66,622	0/0:17,0:17:45.06:0,45,434	0/0:24,0:24:60.07:0,60,568	1/1:2,20:22:52.36:589,52,0	0/0:33,0:33:90.03:0,90,843	0/0:24,0:24:60.08:0,60,575	0/0:19,0:19:54.04:0,54,505	0/0:25,0:25:66.02:0,66,616	0/0:19,0:19:54.09:0,54,521	0/0:26,0:26:69.07:0,69,651	0/0:16,0:16:45.06:0,45,427	0/0:20,0:20:48.02:0,48,448	0/0:26,0:27:67.59:0,68,618	0/0:15,0:15:45.04:0,45,421	0/0:39,0:39:99:0,111,1055	0/0:16,0:16:45.03:0,45,421	1/1:1,18:19:54.11:622,54,0	1/1:3,20:23:57.09:641,57,0	1/1:3,4:7:12.04:142,12,0	0/0:20,0:20:54.04:0,54,506	0/0:33,0:33:87.05:0,87,813	0/0:38,0:37:99:0,111,1050	0/0:10,0:10:28.86:0,29,265
chr10	62645826	.	GT	G	2353.73	PASS	AB=0.917;AC=13;AF=0.232;AN=56;BaseQRankSum=12.401;DP=592;FS=3.417;HRun=10;HaplotypeScore=57.3919;InbreedingCoeff=0.8682;MQ=68.94;MQ0=0;MQRankSum=-1.711;QD=17.06;ReadPosRankSum=1.741;VQSLOD=4.4044;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,18:23:46.32:443,46,0	0/0:6,0:6:15.04:0,15,166	0/1:10,1:11:8.01:8,0,138	0/0:18,0:16:19.50:0,19,224	1/1:9,23:32:62.71:532,63,0	0/0:24,1:25:46.15:0,46,737	0/0:10,0:10:26.99:0,27,275	0/0:32,0:32:72.17:0,72,781	1/1:2,24:27:70.92:595,71,0	0/0:35,0:35:92.58:0,93,971	0/0:22,0:22:63.16:0,63,690	0/0:15,0:15:14.24:0,14,336	0/0:19,1:20:25.06:0,25,493	0/0:19,0:19:54.13:0,54,589	0/0:26,1:27:52.15:0,52,796	0/0:25,0:25:69.19:0,69,763	0/0:17,2:19:2:0,2,465	0/0:17,0:17:51.06:0,51,530	0/0:22,0:23:59.98:0,60,637	0/0:25,0:25:60.16:0,60,664	0/0:19,0:19:31.08:0,31,555	1/1:1,12:13:26.98:234,27,0	1/1:1,16:17:44.99:390,45,0	1/1:1,14:15:38.99:339,39,0	0/0:30,0:30:84.21:0,84,914	0/0:21,1:22:28.06:0,28,512	0/0:35,0:35:99:0,99,1051	0/0:10,0:10:30.07:0,30,323
chr10	62647984	.	G	GA	641.19	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=-2.476;DP=498;FS=18.530;HRun=9;HaplotypeScore=50.5781;InbreedingCoeff=0.8016;MQ=58.12;MQ0=8;MQRankSum=0.634;QD=13.64;ReadPosRankSum=0.883;VQSLOD=1.7203;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:26:70.52:0,71,608	0/1:7,0:7:13.45:13,0,88	0/0:39,0:5:9.25:0,9,63	0/0:37,0:13:10.62:0,11,77	0/0:27,0:26:65.96:0,66,567	0/0:16,0:16:44.99:0,45,391	0/0:13,0:13:35.99:0,36,312	0/0:25,0:25:65.96:0,66,573	0/0:12,0:12:32.98:0,33,282	0/0:21,0:21:40.99:0,41,342	0/0:16,0:16:32.98:0,33,286	0/0:6,0:6:17.98:0,18,152	0/0:8,0:8:17.98:0,18,156	0/0:8,0:8:17.98:0,18,156	0/0:14,0:14:32.99:0,33,286	0/0:16,0:16:35.98:0,36,312	0/0:29,0:29:71.96:0,72,624	0/0:19,0:19:24.05:0,24,405	0/0:20,0:19:50.95:0,51,437	0/0:13,0:13:32.99:0,33,286	0/0:11,0:11:26.98:0,27,234	1/1:5,4:9:14.83:142,15,0	1/1:1,17:16:36.10:399,36,0	1/1:2,11:12:21.06:232,21,0	0/0:21,0:21:50.96:0,51,442	0/0:19,0:19:53.71:0,54,449	0/0:16,0:16:35.97:0,36,312	0/0:13,0:13:32.82:0,33,269
chr10	62648708	.	G	GAA	2777.56	PASS	AB=0.613;AC=11;AF=0.196;AN=56;BaseQRankSum=4.119;DP=737;FS=1.655;HRun=12;HaplotypeScore=111.6380;InbreedingCoeff=0.9163;MQ=69.30;MQ0=1;MQRankSum=-0.413;QD=14.10;ReadPosRankSum=-0.703;VQSLOD=2.4361;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,2:44:60.08:580,60,0	0/0:10,0:12:14.77:0,15,186	0/0:22,0:21:30.57:0,31,247	0/0:10,0:11:17.90:0,18,149	1/1:10,4:34:37.67:536,38,0	0/0:17,0:17:32.90:0,33,297	0/0:25,0:29:56.12:0,56,542	0/0:22,0:26:24.51:0,25,374	0/1:7,3:19:0.88:150,0,1	0/0:29,0:32:43.16:0,43,408	0/0:23,0:25:15.12:0,15,325	0/0:28,0:29:67.38:0,67,614	0/0:15,0:16:20.28:0,20,213	0/0:27,0:30:62.38:0,62,530	0/0:29,0:33:73.82:0,74,657	0/0:22,0:22:35.62:0,36,362	0/0:28,0:31:65.15:0,65,609	0/0:15,0:18:22.21:0,22,261	0/0:17,0:20:14.62:0,15,246	0/0:19,0:20:10.06:0,10,294	0/0:25,0:25:56.10:0,56,527	1/1:6,22:31:57.37:633,57,0	1/1:9,20:34:46.38:493,46,0	1/1:6,26:34:43.63:564,44,0	0/0:20,0:24:31.38:0,31,469	0/0:36,0:37:47.70:0,48,552	0/0:45,0:46:78.99:0,79,1022	0/0:13,0:14:41.75:0,42,363
chr10	62650271	.	A	AT	1614.25	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=-8.040;DP=594;FS=0.501;HRun=10;HaplotypeScore=58.0895;InbreedingCoeff=0.7893;MQ=71.79;MQ0=0;MQRankSum=0.890;QD=18.99;ReadPosRankSum=0.024;VQSLOD=4.2960;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,28:36:82.45:867,82,0	0/0:16,0:16:32.89:0,33,308	0/0:15,0:14:17.94:0,18,134	0/1:6,0:5:12.14:12,0,19	1/1:12,30:43:46.67:864,47,0	0/0:16,0:16:38.92:0,39,317	0/0:17,0:17:41.93:0,42,342	0/0:26,0:26:68.86:0,69,558	0/0:11,0:11:26.97:0,27,222	0/0:35,0:35:80.61:0,81,643	0/0:22,0:22:50.90:0,51,416	0/0:21,0:21:62.91:0,63,515	0/0:17,0:17:41.94:0,42,345	0/0:22,1:23:24.89:0,25,402	0/0:16,0:16:32.92:0,33,265	0/0:22,0:22:50.91:0,51,414	0/0:31,0:31:80.90:0,81,665	0/0:19,0:19:47.94:0,48,394	0/0:23,1:26:25.99:0,26,398	0/0:20,0:20:56.92:0,57,466	0/0:17,0:17:38.93:0,39,317	0/0:20,0:20:42.33:0,42,339	0/0:12,0:12:32.93:0,33,266	0/0:15,0:15:35.95:0,36,296	0/0:20,0:20:53.92:0,54,443	0/0:15,0:15:41.93:0,42,343	0/0:31,0:31:86.85:0,87,708	0/0:24,0:26:60.98:0,61,477
chr10	62650453	.	CA	C	2853.47	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=11.111;DP=603;FS=10.698;HRun=8;HaplotypeScore=58.9480;InbreedingCoeff=0.9899;MQ=79.27;MQ0=0;MQRankSum=-0.947;QD=24.18;ReadPosRankSum=2.359;VQSLOD=4.0092;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,40:40:99:1043,108,0	0/0:10,0:10:24.07:0,24,290	0/0:16,1:17:16.13:0,16,296	0/0:13,0:13:19.01:0,19,259	1/1:0,20:20:57.09:550,57,0	0/0:22,0:22:51.16:0,51,616	0/0:27,0:28:78:0,78,901	0/0:19,0:20:54.03:0,54,631	1/1:0,11:11:33.05:319,33,0	0/0:26,0:26:72.19:0,72,841	0/0:14,1:15:16.16:0,16,478	0/0:34,0:34:93.25:0,93,1090	0/0:18,0:18:42.13:0,42,504	0/0:20,0:20:57.17:0,57,679	0/0:19,0:19:57.17:0,57,689	0/0:24,0:24:66.18:0,66,776	0/0:39,0:39:99:0,102,1217	0/0:25,0:25:75.23:0,75,906	0/0:23,0:23:66.19:0,66,785	0/0:13,0:13:39.12:0,39,471	0/0:34,0:34:90.26:0,90,1076	1/1:2,10:12:30.05:289,30,0	1/1:1,15:16:39.06:377,39,0	1/1:1,18:19:48.08:464,48,0	0/0:28,0:28:81.18:0,81,931	0/0:23,0:23:63.19:0,63,761	0/0:29,0:29:78.22:0,78,930	0/0:5,0:5:15.05:0,15,181
chr10	62653343	.	A	ACACG	2677.50	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-7.384;DP=637;FS=4.038;HRun=0;HaplotypeScore=100.4048;InbreedingCoeff=0.9794;MQ=69.48;MQ0=1;MQRankSum=-0.452;QD=37.19;ReadPosRankSum=1.114;VQSLOD=3.4557;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:21,29:51:72.25:1755,72,0	0/0:4,0:4:12.04:0,12,204	0/0:23,0:22:45.15:0,45,740	0/0:29,0:28:57.19:0,57,931	1/1:6,15:21:42.14:1044,42,0	0/0:14,0:14:30.10:0,30,505	0/0:28,0:28:57.19:0,57,967	0/0:37,0:36:69.21:0,69,1084	0/0:12,0:11:24.06:0,24,380	0/0:16,0:16:33.07:0,33,529	0/0:18,0:18:33.09:0,33,526	0/0:23,0:23:63.22:0,63,1069	0/0:20,0:20:54.18:0,54,913	0/0:22,0:22:57.20:0,57,966	0/0:29,0:29:81.26:0,81,1348	0/0:27,0:27:51.17:0,51,865	0/0:37,0:37:75.26:0,75,1259	0/0:20,0:20:39.13:0,39,619	0/0:32,0:32:75.26:0,75,1250	0/0:13,0:13:33.11:0,33,560	0/0:48,0:48:99:0,111,1838	0/0:8,0:8:24.08:0,24,404	0/0:15,0:15:36.12:0,36,605	0/0:28,0:28:54.14:0,54,876	0/0:15,0:15:36.11:0,36,578	0/0:17,0:17:42.14:0,42,711	0/0:19,0:19:45.15:0,45,762	0/0:11,0:11:21.04:0,21,299
chr10	62654109	.	TAC	T	2778.11	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=0.527;DP=627;FS=2.557;HRun=0;HaplotypeScore=236.3243;InbreedingCoeff=0.9745;MQ=58.32;MQ0=3;MQRankSum=-5.487;QD=23.35;ReadPosRankSum=-2.311;VQSLOD=3.1960;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,10:12:27.04:313,27,0	0/0:11,0:11:27.09:0,27,438	0/0:34,0:25:46.36:0,46,680	0/0:27,0:24:60.10:0,60,893	1/1:3,24:27:60.03:678,60,0	0/0:25,0:25:63.20:0,63,990	0/0:22,0:22:51.17:0,51,821	0/0:38,0:37:93.29:0,93,1458	1/1:3,17:19:48.15:591,48,0	0/0:21,0:21:60.09:0,60,918	0/0:22,0:22:48.16:0,48,783	0/0:24,0:24:63.22:0,63,1024	0/0:26,0:26:54.18:0,54,879	0/0:21,0:21:47.95:0,48,707	0/0:22,0:22:60.20:0,60,965	0/0:30,0:30:84.28:0,84,1335	0/0:18,0:18:48.16:0,48,783	0/0:15,1:16:5.23:0,5,576	0/0:14,0:14:33.11:0,33,528	0/0:29,1:30:38.31:0,38,1112	0/0:31,0:31:69.23:0,69,1111	1/1:5,9:14:23.99:249,24,0	1/1:4,18:22:42.04:478,42,0	1/1:4,20:24:54.17:657,54,0	0/0:14,0:14:42.14:0,42,673	0/0:16,0:16:39.13:0,39,627	0/0:36,0:35:99:0,102,1616	0/0:10,0:10:24.07:0,24,368
chr10	62656191	.	GT	G	1279.28	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.276;DP=547;FS=3.167;HRun=2;HaplotypeScore=60.9546;InbreedingCoeff=0.9842;MQ=61.65;MQ0=1;MQRankSum=2.735;QD=31.98;ReadPosRankSum=2.440;VQSLOD=3.4728;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,21:22:63.20:817,63,0	0/0:12,0:12:36.12:0,36,536	0/0:28,0:25:72.13:0,72,1034	0/0:26,0:23:63.35:0,63,967	1/1:1,16:17:45.15:584,45,0	0/0:18,0:18:54.17:0,54,791	0/0:20,0:20:57.18:0,57,831	0/0:21,0:21:63.21:0,63,944	0/0:14,0:14:42.14:0,42,629	0/0:21,0:21:60.19:0,60,878	0/0:28,0:28:78.26:0,78,1160	0/0:21,0:21:63.20:0,63,923	0/0:20,0:20:60.20:0,60,898	0/0:19,0:19:57.19:0,57,851	0/0:15,0:15:42.13:0,42,608	0/0:15,0:15:45.11:0,45,649	0/0:22,0:22:66.22:0,66,988	0/0:22,0:22:66.13:0,66,933	0/0:20,0:20:57.19:0,57,854	0/0:26,0:26:78.25:0,78,1145	0/0:18,0:18:54.18:0,54,792	0/0:13,0:13:39.02:0,39,533	0/0:17,0:17:42.09:0,42,585	0/0:28,0:27:81.23:0,81,1186	0/0:15,0:15:42.14:0,42,609	0/0:20,0:20:60.19:0,60,881	0/0:24,0:24:69.21:0,69,993	0/0:4,0:4:12.04:0,12,180
chr10	62656257	.	AAAAC	A	3907.84	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=11.406;DP=608;FS=0.896;HRun=0;HaplotypeScore=105.0916;InbreedingCoeff=0.9973;MQ=67.48;MQ0=1;MQRankSum=-1.954;QD=38.31;ReadPosRankSum=0.759;VQSLOD=3.9892;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,15:19:48.10:760,48,0	0/0:9,0:9:27.08:0,27,624	0/0:32,1:28:26.38:0,26,897	0/0:26,0:19:19.47:0,19,748	1/1:3,27:30:80.91:1236,81,0	0/0:20,0:20:51.18:0,51,1250	0/0:17,0:17:45.15:0,45,1076	0/0:22,0:22:45.15:0,45,1073	0/0:13,0:13:36.12:0,36,882	0/0:20,0:20:60.20:0,60,1441	0/0:32,0:32:84.29:0,84,2070	0/0:17,0:17:51.18:0,51,1274	0/0:16,0:16:45.15:0,45,1108	0/0:20,0:20:54.17:0,54,1275	0/0:19,0:19:51.17:0,51,1228	0/0:26,0:26:72.23:0,72,1708	0/0:28,0:28:75.26:0,75,1842	0/0:12,0:12:33.11:0,33,826	0/0:37,0:37:84.28:0,84,2025	0/0:20,0:20:57.20:0,57,1384	0/0:12,0:12:33.11:0,33,817	1/1:4,9:13:30.10:510,30,0	1/1:3,15:18:45.11:737,45,0	1/1:5,17:22:39.13:665,39,0	0/0:28,0:28:81.28:0,81,2030	0/0:38,0:37:99:0,102,2486	0/0:32,0:32:93.32:0,93,2312	0/0:8,0:8:24.08:0,24,601
chr10	62656286	.	CA	C	242.91	PASS	AB=0.933;AC=3;AF=0.054;AN=56;BaseQRankSum=3.386;DP=614;FS=1.885;HRun=9;HaplotypeScore=77.7522;InbreedingCoeff=0.6079;MQ=67.25;MQ0=1;MQRankSum=0.101;QD=8.68;ReadPosRankSum=0.418;VQSLOD=2.0144;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:51.15:0,51,586	0/0:8,0:8:24.06:0,24,267	0/0:26,0:21:42.96:0,43,462	0/0:21,0:14:7.59:0,8,233	0/0:25,0:25:69.20:0,69,796	0/0:26,0:26:66.20:0,66,761	0/0:21,0:21:57.10:0,57,624	0/0:22,1:23:28.07:0,28,522	1/1:2,12:14:36.02:329,36,0	0/0:27,0:27:75.21:0,75,852	0/0:25,1:26:41.74:0,42,732	0/0:17,0:17:51.15:0,51,589	0/0:13,0:13:39.12:0,39,450	0/0:21,0:21:51.15:0,51,589	0/0:16,1:17:17.67:0,18,457	0/0:27,0:27:78.23:0,78,897	0/0:36,0:36:93.26:0,93,1061	0/0:14,0:14:36.06:0,36,399	0/0:26,0:26:60.18:0,60,692	0/0:22,0:22:54.14:0,54,613	0/1:13,1:14:18.71:19,0,310	0/0:15,0:15:45.12:0,45,507	0/0:18,0:18:42.11:0,42,475	0/0:15,0:15:36.11:0,36,415	0/0:31,0:31:81.21:0,81,913	0/0:41,0:41:99:0,108,1237	0/0:45,0:44:99:0,120,1379	0/0:6,0:6:18.05:0,18,208
chr10	62656365	.	TGAGA	T	5559.92	PASS	AB=0.711;AC=44;AF=0.815;AN=54;BaseQRankSum=-2.845;DP=471;FS=5.446;HRun=0;HaplotypeScore=102.3557;InbreedingCoeff=0.5636;MQ=59.96;MQ0=3;MQRankSum=2.535;QD=13.93;ReadPosRankSum=3.770;VQSLOD=4.0402;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:12:2.04:6,2,0	1/1:1,0:1:3:25,3,0	0/0:19,0:13:4.83:0,5,57	./.	1/1:7,1:15:12.36:72,12,0	0/1:15,10:25:4.16:223,0,4	1/1:11,8:20:12.03:172,12,0	1/1:16,15:30:42.45:469,42,0	1/1:5,0:10:18.02:169,18,0	1/1:8,10:18:27.07:406,27,0	1/1:6,2:9:15:211,15,0	1/1:8,5:14:15.01:220,15,0	1/1:9,0:11:11.95:96,12,0	1/1:7,9:17:15.04:219,15,0	1/1:5,14:22:42.11:613,42,0	1/1:15,4:21:35.79:420,36,0	0/1:17,11:29:5.13:248,0,5	1/1:5,6:10:3.01:49,3,0	1/1:13,9:23:29.89:393,30,0	1/1:7,9:17:15.04:221,15,0	1/1:11,9:20:9.03:145,9,0	0/0:12,0:12:20.80:0,21,151	0/0:5,0:5:6:0,6,73	0/0:12,0:12:5.59:0,6,53	1/1:8,5:14:15.04:221,15,0	1/1:10,13:24:41.21:504,41,0	1/1:10,15:25:21.06:316,21,0	1/1:2,6:8:9.03:144,9,0
chr10	62656397	.	A	AGTGTGTGT	595.25	PASS	AB=1.000;AC=8;AF=0.143;AN=56;BaseQRankSum=4.880;DP=535;FS=1.616;HRun=0;HaplotypeScore=166.9141;InbreedingCoeff=0.5406;MQ=63.84;MQ0=8;MQRankSum=-0.602;QD=6.20;ReadPosRankSum=-3.852;VQSLOD=1.8711;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:8,5:14:5.75:101,6,0	0/0:5,0:5:15.05:0,15,376	0/0:22,0:11:13.91:0,14,366	0/0:37,0:16:21.38:0,21,411	1/1:22,0:22:24.45:332,24,0	0/0:17,0:17:33.06:0,33,676	0/0:26,0:26:56.91:0,57,1406	0/1:31,0:29:21.03:21,0,752	0/0:9,0:9:11.68:0,12,503	0/0:20,0:20:56.17:0,56,1339	0/0:13,0:13:28.91:0,29,672	0/0:13,0:13:23.18:0,23,803	0/0:16,0:16:7.60:0,8,619	0/0:15,0:15:29.73:0,30,704	0/0:25,0:25:47.70:0,48,1234	0/0:24,0:24:13.87:0,14,1161	0/0:29,0:29:63.22:0,63,1646	0/0:8,0:7:5.75:0,6,149	0/0:24,0:23:39.61:0,40,1130	0/0:19,0:18:39.13:0,39,1006	0/0:20,0:20:27.09:0,27,707	1/1:8,3:13:5.70:192,6,0	0/0:3,5:10:2.99:0,3,24	0/1:15,0:15:26.16:87,0,26	0/0:11,0:10:27.09:0,27,659	0/0:31,0:31:40.05:0,40,1686	0/0:28,0:27:55.59:0,56,1200	0/0:16,0:16:36.04:0,36,885
chr10	62656483	.	AC	A	1807.81	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=8.686;DP=583;FS=6.435;HRun=1;HaplotypeScore=62.5307;InbreedingCoeff=0.8453;MQ=71.75;MQ0=0;MQRankSum=-0.340;QD=33.48;ReadPosRankSum=-0.021;VQSLOD=2.9789;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,19:19:54.18:755,54,0	0/0:11,0:11:33.11:0,33,520	0/1:7,0:7:2.68:3,0,148	0/0:10,0:11:25.75:0,26,271	1/1:0,28:28:84.28:1174,84,0	0/0:14,0:14:42.14:0,42,671	0/0:20,0:19:60.20:0,60,957	0/0:37,0:37:99:0,108,1664	0/0:15,0:15:45.13:0,45,693	0/0:33,0:33:99:0,99,1582	0/0:23,0:23:66.20:0,66,1010	0/0:24,0:24:72.25:0,72,1151	0/0:20,0:20:60.19:0,60,936	0/0:15,0:15:45.15:0,45,718	0/0:16,0:16:48.15:0,48,743	0/0:22,0:22:66.20:0,66,1007	0/0:25,0:25:75.24:0,75,1175	0/0:7,0:7:21.05:0,21,310	0/0:26,0:26:75.26:0,75,1197	0/0:22,0:22:66.23:0,66,1055	0/0:27,0:27:81.26:0,81,1268	0/0:12,0:12:36.12:0,36,574	0/0:17,0:17:45.14:0,45,695	0/0:19,0:19:51.17:0,51,813	0/0:16,0:16:48.16:0,48,765	0/0:36,0:36:99:0,108,1725	0/0:39,0:39:99:0,117,1866	0/0:22,0:22:63.14:0,63,908
chr10	62656776	.	A	AT	534.76	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-5.746;DP=610;FS=5.282;HRun=1;HaplotypeScore=58.8054;InbreedingCoeff=0.9576;MQ=70.77;MQ0=0;MQRankSum=-0.063;QD=33.42;ReadPosRankSum=1.541;VQSLOD=3.2366;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:78.22:0,78,979	0/0:13,0:13:39.13:0,39,506	0/0:6,0:7:13.93:0,14,88	0/0:9,0:9:13.23:0,13,200	0/0:30,0:30:87.27:0,87,1114	0/0:27,0:27:81.26:0,81,1051	0/0:17,0:17:51.15:0,51,647	0/0:28,0:28:81.25:0,81,1026	1/1:0,16:16:42.14:630,42,0	0/0:35,0:35:99:0,105,1347	0/0:23,0:23:66.21:0,66,855	0/0:12,0:12:33.11:0,33,427	0/0:32,0:32:93.29:0,93,1192	0/0:19,0:19:57.18:0,57,734	0/0:21,0:21:63.20:0,63,818	0/0:16,0:16:48.16:0,48,623	0/0:33,0:33:90.27:0,90,1149	0/0:16,0:16:48.16:0,48,622	0/0:28,0:28:81.26:0,81,1039	0/0:18,0:18:54.18:0,54,700	0/0:29,0:29:87.26:0,87,1113	0/0:13,0:13:39.11:0,39,492	0/0:22,0:22:63.20:0,63,818	0/0:16,0:16:48.14:0,48,608	0/0:29,0:29:87.28:0,87,1130	0/0:30,0:30:87.28:0,87,1130	0/0:23,0:23:69.21:0,69,881	0/0:20,0:20:60.19:0,60,777
chr10	62658017	.	T	TAAAAAA	7379.34	PASS	AB=0.821;AC=43;AF=0.768;AN=56;BaseQRankSum=1.383;DP=458;FS=0.000;HRun=17;HaplotypeScore=120.4082;InbreedingCoeff=0.6760;MQ=49.48;MQ0=3;MQRankSum=-3.477;QD=18.82;ReadPosRankSum=-3.553;VQSLOD=0.3484;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:33:36.02:447,36,0	1/1:5,0:9:3.86:23,4,0	0/0:11,0:5:5.90:0,6,42	0/0:9,0:3:2.58:0,3,11	1/1:15,0:25:36.94:433,37,0	1/1:7,3:12:9.03:205,9,0	1/1:9,1:10:9.31:253,9,0	0/1:18,0:21:10.07:219,0,10	0/0:1,0:13:2.07:0,2,16	1/1:16,0:12:21.04:380,21,0	1/1:13,0:17:21.07:421,21,0	1/1:16,6:21:18.06:336,18,0	1/1:12,0:11:9.03:209,9,0	1/1:15,0:14:24.08:457,24,0	1/1:17,0:16:19.88:424,20,0	1/1:9,1:14:21.07:446,21,0	1/1:13,0:17:14.04:210,14,0	1/1:12,0:19:8.99:97,9,0	1/1:14,0:14:21.07:411,21,0	1/1:16,4:20:20.43:428,20,0	1/1:4,0:4:7.84:140,8,0	0/0:4,0:4:8.99:0,9,136	0/0:11,0:12:8.21:0,8,114	0/0:17,0:17:22.75:0,23,380	1/1:17,0:19:27.06:473,27,0	1/1:23,0:23:32.14:674,32,0	1/1:18,8:27:18.06:473,18,0	1/1:13,0:13:9.03:218,9,0
chr10	62658337	.	G	GT	2543.68	PASS	AB=1.000;AC=12;AF=0.214;AN=56;BaseQRankSum=13.071;DP=571;FS=2.469;HRun=3;HaplotypeScore=100.4164;InbreedingCoeff=0.7443;MQ=70.14;MQ0=4;MQRankSum=-4.782;QD=18.57;ReadPosRankSum=1.842;VQSLOD=3.3988;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,25:31:81.13:934,81,0	0/1:10,0:10:14.82:15,0,24	0/0:28,0:18:13.20:0,13,271	0/0:23,0:16:17.59:0,18,172	1/1:8,15:23:50.91:543,51,0	0/0:18,0:18:48.09:0,48,522	0/0:26,0:26:41.76:0,42,633	0/0:21,0:21:28.12:0,28,259	0/0:11,0:11:27.05:0,27,297	0/0:25,0:23:54.53:0,55,565	0/0:16,0:16:29.83:0,30,375	0/0:22,0:22:51.09:0,51,551	0/0:25,0:25:66.14:0,66,730	0/0:16,0:16:34.50:0,34,413	0/0:25,0:25:69.09:0,69,741	0/0:23,0:23:55.96:0,56,613	0/0:33,0:33:1.38:0,1,160	0/1:28,0:28:28.58:29,0,40	0/0:19,0:19:36.05:0,36,376	0/0:14,0:14:25.38:0,25,264	0/0:8,0:8:18.04:0,18,203	1/1:7,11:18:42.05:464,42,0	1/1:4,10:14:33.09:397,33,0	1/1:3,9:12:30.03:343,30,0	0/0:13,0:13:36.07:0,36,391	0/0:26,0:26:59.95:0,60,636	0/0:30,0:30:77.15:0,77,836	0/0:12,0:12:20.99:0,21,202
chr10	62658340	.	T	TA	1944.71	PASS	AB=0.920;AC=19;AF=0.339;AN=56;BaseQRankSum=2.763;DP=590;FS=0.000;HRun=13;HaplotypeScore=101.5196;InbreedingCoeff=0.3658;MQ=68.63;MQ0=5;MQRankSum=-3.582;QD=6.80;ReadPosRankSum=1.887;VQSLOD=2.6696;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:32,0:31:20.03:319,20,0	1/1:1,9:10:21.50:196,21,0	0/0:31,0:21:13.49:0,13,136	0/0:22,0:14:7.43:0,7,47	0/1:22,0:22:8.54:157,0,9	0/0:20,0:20:41.26:0,41,274	0/1:22,1:25:1.32:1,0,246	0/1:10,11:22:2.47:214,0,2	0/0:12,0:12:29.55:0,30,196	0/1:25,2:25:8.42:8,0,229	0/1:15,2:17:14.18:14,0,199	0/0:19,0:21:46.57:0,47,310	0/0:24,0:24:58.22:0,58,392	0/0:16,0:16:10.46:0,10,205	0/0:30,0:30:49.43:0,49,393	0/0:20,1:22:19.74:0,20,311	1/1:7,22:32:16.28:404,16,0	1/1:3,25:28:51.06:474,51,0	0/0:17,1:19:21.70:0,22,279	0/1:12,3:16:5.08:5,0,101	0/0:8,0:8:17.74:0,18,119	0/1:19,0:18:17.81:109,0,18	0/1:14,0:14:17.83:95,0,18	1/1:13,0:13:23.93:122,24,0	0/0:13,0:14:28.77:0,29,191	0/0:27,1:29:52.40:0,52,349	0/0:30,1:34:38.49:0,38,387	0/1:9,0:9:10.57:11,0,50
chr10	62658365	.	C	CA	727.58	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=7.606;DP=593;FS=13.909;HRun=3;HaplotypeScore=94.6932;InbreedingCoeff=0.9799;MQ=61.01;MQ0=9;MQRankSum=-4.211;QD=17.75;ReadPosRankSum=0.566;VQSLOD=2.4036;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:29.98:0,30,86	0/0:12,0:12:33.10:0,33,392	0/0:24,0:13:30.06:0,30,340	0/0:19,0:9:14.91:0,15,162	0/0:22,0:22:26.86:0,27,87	0/0:17,0:17:48.15:0,48,575	0/0:23,0:23:66.17:0,66,768	0/0:20,0:20:54.16:0,54,641	0/0:17,0:17:46.34:0,46,479	0/0:32,0:30:81.24:0,81,962	0/0:19,0:19:48.14:0,48,569	0/0:20,0:20:54.16:0,54,640	0/0:28,0:28:83.83:0,84,966	0/0:19,0:19:54.16:0,54,648	0/0:31,0:31:90.28:0,90,1078	0/0:27,0:27:67.69:0,68,820	0/0:29,0:29:34.96:0,35,702	0/0:25,0:25:51.11:0,51,588	0/0:25,0:24:68.69:0,69,793	0/0:19,0:19:42.10:0,42,487	0/0:12,0:12:36.10:0,36,418	1/1:6,11:16:35.76:361,36,0	1/1:5,11:16:19.67:331,20,0	1/1:3,5:8:15.04:175,15,0	0/0:20,0:20:51.16:0,51,610	0/0:24,0:24:66.19:0,66,772	0/0:31,0:31:87.17:0,87,1014	0/0:7,0:7:15.03:0,15,167
chr10	62658367	.	AAC	A	1620.13	PASS	AB=0.971;AC=6;AF=0.107;AN=56;BaseQRankSum=9.259;DP=594;FS=0.540;HRun=0;HaplotypeScore=99.9580;InbreedingCoeff=0.6031;MQ=61.11;MQ0=9;MQRankSum=-4.214;QD=19.52;ReadPosRankSum=-0.935;VQSLOD=3.6070;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,25:27:57.09:795,57,0	0/0:12,0:12:33.02:0,33,474	0/0:25,0:13:35.48:0,35,454	0/0:18,0:9:19.87:0,20,227	1/1:1,22:23:65.48:889,65,0	0/0:17,0:17:51.17:0,51,861	0/0:22,0:22:66.19:0,66,1085	0/0:22,0:22:60.17:0,60,912	0/0:17,0:17:25.56:0,26,568	0/0:32,0:30:84.27:0,84,1370	0/0:20,0:20:50.52:0,51,807	0/0:19,0:19:54.18:0,54,937	0/0:29,0:29:87.15:0,87,1369	0/0:19,0:19:54.18:0,54,928	0/0:31,0:31:93.24:0,93,1490	0/0:27,0:27:80.90:0,81,1279	0/0:28,0:28:54.61:0,55,1043	0/0:25,0:25:54.12:0,54,839	0/0:25,0:24:71.25:0,71,1092	0/0:20,0:20:38.14:0,38,680	0/0:14,0:14:42.11:0,42,628	0/1:15,1:15:28.15:59,0,28	0/1:16,0:16:12.39:12,0,45	0/0:7,0:7:5.03:0,5,15	0/0:20,0:20:57.17:0,57,882	0/0:23,0:23:66.05:0,66,1023	0/0:32,0:32:90.28:0,90,1461	0/0:7,0:7:18.03:0,18,241
chr10	62658376	.	A	AC	656.31	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=2.564;DP=608;FS=3.827;HRun=3;HaplotypeScore=90.6805;InbreedingCoeff=0.3400;MQ=66.84;MQ0=8;MQRankSum=-2.618;QD=10.94;ReadPosRankSum=2.013;VQSLOD=1.6894;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:56.69:0,57,441	0/0:12,0:12:33.07:0,33,362	0/0:24,0:18:35.69:0,36,385	0/0:15,1:9:20.14:0,20,203	0/0:24,0:24:56.71:0,57,418	0/0:18,0:18:54.15:0,54,633	0/0:22,0:22:51.11:0,51,574	0/0:29,0:29:81.20:0,81,918	1/1:1,16:17:39.13:533,39,0	0/0:28,0:27:72.21:0,72,852	0/0:21,0:21:42.18:0,42,629	0/0:19,0:19:51.15:0,51,600	0/0:29,0:29:84.22:0,84,968	0/0:20,0:20:55.93:0,56,622	0/0:29,0:29:81.24:0,81,956	0/0:26,1:27:31.22:0,31,763	0/0:28,0:28:60.15:0,60,684	0/0:22,0:22:54.03:0,54,575	0/0:22,0:21:51.11:0,51,587	0/0:22,0:22:47.98:0,48,507	0/0:16,0:16:39.11:0,39,455	0/1:18,0:17:74.52:107,0,75	0/1:17,0:17:72.02:85,0,72	0/1:8,0:8:26.11:55,0,26	0/0:22,0:22:60.14:0,60,685	0/0:24,0:24:69.18:0,69,798	0/0:35,0:35:93.16:0,93,1031	0/0:8,0:8:21.03:0,21,226
chr10	62659442	.	C	CTTTT	6201.63	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=10.779;DP=655;FS=5.167;HRun=6;HaplotypeScore=118.7458;InbreedingCoeff=0.9926;MQ=74.65;MQ0=0;MQRankSum=-12.752;QD=57.42;ReadPosRankSum=-3.030;VQSLOD=3.5166;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:11,20:32:71.05:1712,71,0	0/0:13,0:13:39.13:0,39,626	0/0:15,0:15:33.10:0,33,521	0/0:19,0:19:33.24:0,33,610	1/1:7,15:23:63.19:1420,63,0	0/0:22,0:22:54.16:0,54,842	0/0:31,0:31:78.23:0,78,1231	0/0:35,0:35:99:0,102,1583	0/0:22,0:22:63.21:0,63,1017	0/0:28,0:28:78.25:0,78,1263	0/0:30,0:30:87.29:0,87,1398	0/0:31,0:31:90.24:0,90,1379	0/0:26,0:26:75.25:0,75,1214	0/0:19,0:19:45.13:0,45,701	0/0:19,0:19:48.15:0,48,777	0/0:27,0:27:72.22:0,72,1166	0/0:31,0:31:90.20:0,90,1336	0/0:17,0:17:42.12:0,42,646	0/0:23,0:23:63.17:0,63,970	0/0:31,0:31:93.32:0,93,1500	0/0:15,0:15:36.11:0,36,579	1/1:5,19:25:69.24:1629,69,0	1/1:2,16:18:48.12:1168,48,0	1/1:6,4:10:12.04:272,12,0	0/0:19,0:19:51.16:0,51,826	0/0:39,0:39:99:0,114,1821	0/0:16,0:16:48.16:0,48,777	0/0:19,0:19:40.39:0,40,847
chr10	62659464	.	T	TG	3627.67	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=8.441;DP=659;FS=3.918;HRun=0;HaplotypeScore=82.5554;InbreedingCoeff=0.9962;MQ=70.93;MQ0=0;MQRankSum=-9.641;QD=37.02;ReadPosRankSum=-1.062;VQSLOD=3.2739;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,20:22:60.20:912,60,0	0/0:13,0:13:36.12:0,36,503	0/0:17,0:17:48.13:0,48,637	0/0:18,1:19:39.01:0,39,642	1/1:1,25:26:63.13:927,63,0	0/0:23,0:23:69.19:0,69,924	0/0:25,0:25:75.22:0,75,1012	0/0:39,0:39:99:0,111,1458	0/0:22,0:22:66.19:0,66,874	0/0:22,0:22:66.22:0,66,919	0/0:34,0:34:99:0,99,1316	0/0:34,0:34:99:0,102,1423	0/0:27,0:27:81.25:0,81,1113	0/0:18,0:18:51.13:0,51,663	0/0:23,0:23:69.21:0,69,933	0/0:27,0:27:78.23:0,78,1055	0/0:29,0:29:87.28:0,87,1197	0/0:24,0:24:69.12:0,69,901	0/0:20,0:20:60.10:0,60,765	0/0:32,0:32:93.29:0,93,1265	0/0:12,0:12:36.11:0,36,487	1/1:0,21:21:54.18:839,54,0	1/1:1,21:22:48.08:716,48,0	1/1:0,7:7:15.05:233,15,0	0/0:26,0:26:78.24:0,78,1056	0/0:40,0:40:99:0,117,1587	0/0:22,0:22:66.20:0,66,884	0/0:13,0:13:39.08:0,39,521
chr10	62660234	.	C	CT	1103.14	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-4.226;DP=578;FS=12.248;HRun=11;HaplotypeScore=62.8955;InbreedingCoeff=0.8679;MQ=77.53;MQ0=0;MQRankSum=0.062;QD=19.35;ReadPosRankSum=0.921;VQSLOD=3.9949;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,28:31:66.13:669,66,0	0/0:7,0:7:20.91:0,21,160	0/0:15,0:13:2.88:0,3,17	0/0:16,0:15:8.33:0,8,70	1/1:3,23:26:57.03:555,57,0	0/0:17,0:17:50.19:0,50,379	0/0:15,0:15:44.83:0,45,348	0/0:32,0:32:68.70:0,69,533	0/0:2,0:16:21.25:0,21,61	0/0:15,0:16:37.87:0,38,284	0/0:19,0:19:38.79:0,39,301	0/0:14,0:15:38.64:0,39,289	0/0:17,0:19:46.70:0,47,352	0/0:21,0:21:53.77:0,54,418	0/0:25,0:25:53.76:0,54,415	0/0:25,0:25:62.70:0,63,483	0/0:27,0:27:71.71:0,72,557	0/0:15,0:15:38.84:0,39,300	0/0:30,1:32:27.66:0,28,378	0/0:20,1:21:23.31:0,23,361	0/0:18,0:18:50.81:0,51,395	0/0:27,0:27:62.68:0,63,487	0/0:26,0:26:54.86:0,55,422	0/0:11,0:11:29.88:0,30,232	0/0:22,1:23:50.74:0,51,395	0/0:22,0:23:55.79:0,56,422	0/0:26,0:26:67.77:0,68,517	0/0:13,1:14:11.39:0,11,269
chr10	62661153	.	A	AAAG	7017.04	PASS	AB=0.519;AC=31;AF=0.554;AN=56;BaseQRankSum=-6.607;DP=559;FS=47.424;HRun=0;HaplotypeScore=81.6346;InbreedingCoeff=0.8473;MQ=55.97;MQ0=28;MQRankSum=0.287;QD=29.73;ReadPosRankSum=1.820;VQSLOD=2.5023;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:22:22.42:0,22,271	0/0:4,0:4:11.80:0,12,78	0/0:89,0:15:14.80:0,15,138	0/0:67,0:13:1.55:0,2,34	0/0:14,0:13:0.51:0,1,107	1/1:5,7:14:35.90:483,36,0	0/1:1,12:13:0.63:198,0,1	0/0:36,0:36:27.98:0,28,460	0/0:7,0:7:8.30:0,8,107	1/1:10,6:15:41.40:505,41,0	1/1:6,5:14:27.88:444,28,0	1/1:6,5:11:21.40:317,21,0	1/1:7,3:11:16.91:278,17,0	1/1:7,2:10:14.24:216,14,0	1/1:4,6:12:27.86:412,28,0	1/1:1,6:8:17.99:257,18,0	0/0:29,0:28:43.32:0,43,461	0/0:24,0:24:29.18:0,29,437	1/1:16,1:17:47.71:513,48,0	1/1:7,5:19:53.91:678,54,0	1/1:0,5:5:8.74:123,9,0	0/0:5,0:5:11.96:0,12,98	0/0:11,0:11:19.12:0,19,150	0/0:13,0:12:7.40:0,7,154	1/1:7,4:13:38.90:453,39,0	1/1:14,11:25:62.52:892,63,0	1/1:8,15:27:65.58:891,66,0	1/1:4,4:9:23.97:358,24,0
chr10	62661221	.	GAAAA	G	5788.18	PASS	AB=0.545;AC=37;AF=0.685;AN=54;BaseQRankSum=3.803;DP=336;FS=35.622;HRun=14;HaplotypeScore=71.8391;InbreedingCoeff=0.8340;MQ=70.00;MQ0=2;MQRankSum=-0.247;QD=27.96;ReadPosRankSum=5.072;VQSLOD=1.2129;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:2,1:12:2.34:49,0,2	0/0:3,0:3:9.03:0,9,198	0/0:32,0:11:11.71:0,12,155	0/0:17,0:10:6.02:0,6,75	1/1:1,0:10:9.91:25,10,0	1/1:4,13:17:33.06:467,33,0	1/1:0,3:4:12.02:151,12,0	0/0:12,0:19:39.53:0,40,707	1/1:2,0:4:2.45:6,2,0	1/1:3,7:10:21:297,21,0	1/1:0,14:14:42.14:588,42,0	1/1:0,4:4:12.04:165,12,0	1/1:2,7:9:21.06:297,21,0	1/1:1,2:3:5.98:85,6,0	1/1:1,6:7:15.03:212,15,0	1/1:3,4:8:19.31:257,19,0	0/0:20,0:25:64.38:0,64,1404	0/0:21,0:24:66.20:0,66,1373	1/1:9,12:21:35.95:478,36,0	1/1:1,12:13:33.08:467,33,0	1/1:0,5:6:15.01:212,15,0	0/0:4,0:4:12.04:0,12,268	./.	0/0:5,0:5:12.04:0,12,252	1/1:0,8:8:21.04:297,21,0	1/1:2,10:12:30.06:424,30,0	1/1:4,25:29:60.13:844,60,0	1/1:2,14:16:33.05:467,33,0
chr10	62661285	.	A	AAAATAAAT	937.28	PASS	AC=6;AF=0.115;AN=52;BaseQRankSum=1.422;DP=249;FS=0.000;HRun=0;HaplotypeScore=71.7432;InbreedingCoeff=0.5349;MQ=66.83;MQ0=0;MQRankSum=-3.997;QD=46.86;ReadPosRankSum=-0.343;VQSLOD=3.1606;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,1:9:18.06:520,18,0	0/0:1,0:1:3.01:0,3,73	0/0:7,0:4:2.68:0,3,11	./.	1/1:6,4:10:17.98:498,18,0	0/0:11,0:11:20.97:0,21,394	0/0:4,0:4:12.04:0,12,307	0/0:30,0:30:51.17:0,51,1202	1/1:1,0:1:3.01:44,3,0	0/0:3,0:3:6.02:0,6,155	0/0:9,0:9:9.03:0,9,200	0/0:1,0:1:3.01:0,3,77	0/0:7,0:7:9.03:0,9,233	0/0:2,0:2:3.01:0,3,78	0/0:5,0:5:9.03:0,9,208	0/0:5,0:5:12.04:0,12,311	0/0:28,0:28:69.19:0,69,1616	0/0:20,0:20:45.13:0,45,1066	0/0:12,0:12:24.07:0,24,508	0/0:6,0:6:9.03:0,9,233	./.	0/0:4,0:4:6.02:0,6,122	0/0:1,0:1:3.01:0,3,78	0/0:3,0:3:2.99:0,3,23	0/0:10,0:10:18.06:0,18,466	0/0:12,0:12:27.09:0,27,642	0/0:17,0:17:15.03:0,15,284	0/0:17,0:17:36.12:0,36,870
chr10	62663748	.	TAAAA	T	11250.60	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=10.542;DP=565;FS=5.314;HRun=12;HaplotypeScore=104.4703;InbreedingCoeff=0.9926;MQ=74.36;MQ0=0;MQRankSum=-5.379;QD=36.41;ReadPosRankSum=4.849;VQSLOD=4.0910;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:40:99:0,114,2486	0/0:7,0:7:15.05:0,15,339	0/0:20,0:18:39.90:0,40,647	0/0:14,0:13:15.88:0,16,246	0/0:18,0:21:60.20:0,60,1344	1/1:0,20:20:57.19:861,57,0	1/1:3,26:29:75.22:1134,75,0	0/0:21,0:21:45.15:0,45,1064	0/0:17,0:18:51.09:0,51,1179	1/1:2,16:18:48.14:726,48,0	1/1:3,14:16:30.04:454,30,0	1/1:1,29:31:84.26:1249,84,0	1/1:2,18:20:45.14:681,45,0	1/1:4,24:28:69.20:1042,69,0	1/1:9,18:27:48.09:725,48,0	1/1:3,21:24:60.18:908,60,0	0/0:30,0:32:90.31:0,90,2087	0/0:21,0:21:57.20:0,57,1370	1/1:1,8:9:24.06:344,24,0	1/1:0,8:8:24.08:362,24,0	1/1:5,17:22:36.04:545,36,0	0/0:16,0:16:42.14:0,42,1027	0/0:10,0:12:36.12:0,36,804	0/0:30,0:31:81.23:0,81,1757	1/1:2,16:18:22.65:655,23,0	1/1:1,20:21:60.18:886,60,0	1/1:2,10:12:30.08:452,30,0	1/1:0,5:5:15.05:227,15,0
chr10	62664108	.	AAC	A	2466.59	PASS	AB=0.981;AC=22;AF=0.393;AN=56;BaseQRankSum=2.119;DP=533;FS=5.538;HRun=0;HaplotypeScore=86.6923;InbreedingCoeff=-0.1958;MQ=66.52;MQ0=8;MQRankSum=-4.070;QD=7.23;ReadPosRankSum=-10.144;VQSLOD=-0.2464;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:32:68.77:113,0,69	0/0:7,0:7:21.05:0,21,303	0/0:25,0:14:8.39:0,8,222	0/0:24,0:15:13.54:0,14,247	1/1:20,0:20:0.68:136,1,0	0/1:17,1:17:37.63:131,0,38	0/1:16,0:16:5.72:193,0,6	0/0:16,0:15:36.05:0,36,518	0/1:19,0:19:61.87:115,0,62	0/1:24,0:24:1.90:203,0,2	1/1:12,0:11:16.36:171,16,0	0/1:19,3:22:8.33:204,0,8	0/1:17,2:19:21.16:207,0,21	0/1:22,0:22:18.80:219,0,19	0/1:18,0:17:13.46:152,0,13	0/1:18,0:18:60.81:110,0,61	0/0:27,0:27:81.13:0,81,1156	0/0:33,0:30:87.21:0,87,1279	0/1:15,0:14:17.27:105,0,17	0/1:12,0:12:17.38:77,0,17	0/1:17,0:17:24.84:117,0,25	0/0:16,0:16:42.09:0,42,559	0/0:16,0:16:44.97:0,45,573	0/0:28,0:28:78.16:0,78,1139	0/1:21,1:22:18.86:172,0,19	0/1:12,0:12:14.26:62,0,14	0/1:15,0:15:37.50:103,0,37	1/1:6,1:7:4.26:44,4,0
chr10	62664109	.	AC	A	5488.85	PASS	AB=1.000;AC=39;AF=0.696;AN=56;BaseQRankSum=4.818;DP=532;FS=0.357;HRun=1;HaplotypeScore=70.1912;InbreedingCoeff=0.9059;MQ=67.47;MQ0=8;MQRankSum=0.047;QD=15.04;ReadPosRankSum=-7.960;VQSLOD=1.3543;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:32,1:32:64.65:409,65,0	0/0:7,0:7:21.05:0,21,237	0/0:25,0:14:7.33:0,7,164	0/1:25,0:16:4.78:5,0,177	1/1:19,1:20:43.70:331,44,0	1/1:16,2:17:34.65:252,35,0	1/1:15,1:16:29.11:254,29,0	0/0:15,0:14:35.99:0,36,383	1/1:19,0:19:40.54:268,41,0	1/1:20,3:23:55.48:438,55,0	1/1:12,0:11:28.97:210,29,0	1/1:18,3:21:43.37:403,43,0	1/1:18,1:19:42.12:324,42,0	1/1:21,1:22:48.16:391,48,0	1/1:13,5:18:45.98:359,46,0	1/1:18,1:19:33.77:260,34,0	0/0:27,0:27:81.01:0,81,888	0/0:34,0:31:90.10:0,90,1006	1/1:13,2:14:28.47:238,28,0	1/1:11,1:12:28.54:197,29,0	1/1:15,2:17:35.16:271,35,0	0/0:16,0:16:42.07:0,42,446	0/0:16,0:16:44.96:0,45,463	0/0:26,1:27:78.04:0,78,874	1/1:20,2:22:42.19:363,42,0	1/1:11,1:12:27.89:224,28,0	1/1:13,2:15:30.11:243,30,0	1/1:1,6:7:5.99:48,6,0
chr10	62664189	.	AGATGATGATGATGATGATGATGAT	A	12530.91	PASS	AB=0.676;AC=29;AF=0.537;AN=54;BaseQRankSum=6.340;DP=600;FS=4.850;HRun=0;HaplotypeScore=324.0839;InbreedingCoeff=0.8360;MQ=48.59;MQ0=14;MQRankSum=-6.679;QD=42.48;ReadPosRankSum=1.844;VQSLOD=2.9095;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:36:28.27:0,28,1339	0/0:5,0:7:18.06:0,18,756	0/0:23,0:10:3.01:0,3,137	0/0:31,0:20:21.04:0,21,514	0/0:11,0:13:21.06:0,21,760	1/1:6,8:14:18.06:1110,18,0	1/1:18,15:33:8.98:519,9,0	0/0:25,0:24:48.16:0,48,2009	0/0:28,0:28:57.20:0,57,2739	1/1:9,14:23:29.49:1218,29,0	1/1:10,6:16:8.96:355,9,0	1/1:11,8:19:6.02:356,6,0	1/1:9,7:16:12.04:654,12,0	1/1:12,8:20:9.03:517,9,0	1/1:5,17:22:30.10:1888,30,0	0/1:12,11:23:35.72:1275,0,36	0/0:14,0:28:26.76:0,27,970	0/0:18,0:35:48.16:0,48,2112	1/1:9,7:13:17.99:522,18,0	1/1:6,10:16:15.05:806,15,0	1/1:20,0:20:9.03:622,9,0	0/0:20,0:19:36.58:0,37,2323	0/0:20,0:20:42.14:0,42,3457	0/0:32,0:32:78.27:0,78,5694	1/1:11,8:19:14.42:915,14,0	1/1:9,13:22:23.71:838,24,0	1/1:8,8:16:15.05:935,15,0	./.
chr10	62664231	.	T	TGAG	807.11	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=3.590;DP=508;FS=6.665;HRun=0;HaplotypeScore=142.1424;InbreedingCoeff=0.1536;MQ=50.05;MQ0=7;MQRankSum=-3.422;QD=5.68;ReadPosRankSum=1.695;VQSLOD=1.9437;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:31:61.56:62,0,115	0/1:10,0:10:57.39:57,0,93	0/0:23,0:11:29.96:0,30,263	0/0:23,0:9:6.47:0,6,142	0/1:12,0:12:10.03:10,0,185	0/0:9,0:9:19.98:0,20,154	0/0:24,0:24:32.89:0,33,266	0/0:19,0:18:53.79:0,54,448	1/1:2,25:30:14.11:694,14,0	0/0:19,0:19:47.59:0,48,374	0/0:11,0:11:20.82:0,21,157	0/0:10,0:10:11.91:0,12,89	0/0:14,0:14:20.98:0,21,178	0/0:10,0:10:13.75:0,14,99	0/0:26,0:26:50.93:0,51,425	0/0:15,0:15:28.92:0,29,223	0/1:30,0:30:30.04:30,0,281	0/1:27,0:27:86.41:86,0,179	0/0:11,0:8:17.92:0,18,142	0/0:16,0:15:25.23:0,25,185	0/0:21,0:21:42.46:0,42,302	0/0:16,0:16:48.03:0,48,556	0/0:20,0:20:48.10:0,48,703	0/0:36,0:36:84.14:0,84,1172	0/0:10,0:10:19.36:0,19,133	0/0:19,0:19:41.70:0,42,333	0/0:10,0:10:16.97:0,17,128	0/0:4,0:4:11.90:0,12,87
chr10	62664298	.	AGAT	A	3135.92	PASS	AB=0.991;AC=24;AF=0.429;AN=56;BaseQRankSum=-4.089;DP=646;FS=2.810;HRun=0;HaplotypeScore=120.6949;InbreedingCoeff=-0.0326;MQ=55.23;MQ0=18;MQRankSum=1.613;QD=7.61;ReadPosRankSum=7.953;VQSLOD=2.1243;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:80.99:0,81,1052	0/0:13,0:13:30:0,30,399	0/0:29,0:10:9.41:0,9,72	0/0:28,0:13:9:0,9,87	0/0:20,0:19:32.95:0,33,303	0/0:10,0:10:2.88:0,3,194	0/1:31,0:31:99:154,0,133	0/0:26,0:25:53.84:0,54,449	1/1:24,0:24:41.44:311,41,0	1/1:15,0:15:17.74:129,18,0	0/1:15,0:15:3.59:161,0,4	0/1:26,0:25:99:128,0,293	0/1:17,1:18:23.02:167,0,23	0/1:20,0:20:99:155,0,117	0/1:22,0:22:11.83:267,0,12	0/1:17,0:17:23.83:24,0,191	0/0:43,0:42:81.49:0,81,1197	0/0:22,0:22:57.02:0,57,784	0/1:13,1:12:34.40:103,0,34	0/1:20,0:20:4.61:167,0,5	0/1:53,0:53:71.54:425,0,72	1/1:9,3:12:3.01:42,3,0	1/1:14,0:14:20.86:169,21,0	1/1:9,39:48:33.11:458,33,0	0/1:17,0:16:74.37:130,0,74	0/1:22,0:22:46.55:125,0,47	0/1:15,0:15:77.54:121,0,78	0/1:9,0:9:19.64:79,0,20
chr10	62666445	.	A	AT	8487.98	PASS	AB=0.676;AC=36;AF=0.643;AN=56;BaseQRankSum=-10.067;DP=492;FS=4.571;HRun=9;HaplotypeScore=47.9028;InbreedingCoeff=0.6876;MQ=75.20;MQ0=1;MQRankSum=0.783;QD=23.07;ReadPosRankSum=3.906;VQSLOD=5.5811;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,28:29:66.18:730,66,0	0/0:13,0:13:29.99:0,30,260	0/0:24,0:15:12.41:0,12,113	0/1:21,1:15:24.11:24,0,44	1/1:6,13:19:16.14:400,16,0	1/1:2,13:17:32.75:327,33,0	1/1:2,11:13:1.02:239,1,0	0/0:26,0:26:71.98:0,72,625	1/1:2,14:16:39.11:431,39,0	1/1:7,17:24:51.14:563,51,0	1/1:0,17:17:51.09:543,51,0	1/1:1,17:18:36.10:398,36,0	1/1:5,13:18:16.05:400,16,0	1/1:2,13:15:33.09:365,33,0	1/1:4,18:22:54.15:597,54,0	1/1:2,18:20:51.14:564,51,0	0/0:13,0:12:29.98:0,30,260	0/0:16,0:16:41.95:0,42,358	1/1:2,16:18:48.11:514,48,0	0/1:5,13:18:6.99:386,0,7	1/1:1,12:13:33.09:365,33,0	0/0:10,0:10:26.96:0,27,226	0/0:13,0:13:35.92:0,36,303	0/0:7,0:7:18:0,18,156	0/1:3,8:11:5:178,0,5	0/1:6,14:20:6.99:386,0,7	1/1:1,26:29:81.05:877,81,0	1/1:0,9:9:18.05:199,18,0
chr10	62666688	.	CAATAAT	C	1580.97	PASS	AC=32;AF=0.842;AN=38;BaseQRankSum=0.040;DP=233;FS=11.763;HRun=0;HaplotypeScore=49.6719;InbreedingCoeff=0.3973;MQ=63.46;MQ0=0;MQRankSum=-3.663;QD=12.65;ReadPosRankSum=0.912;VQSLOD=0.7513;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	0/0:1,0:1:3.01:0,3,56	./.	./.	1/1:7,0:9:3.01:42,3,0	1/1:1,3:4:6.02:121,6,0	1/1:1,3:4:6.02:112,6,0	0/0:28,0:28:8.97:0,9,98	1/1:5,0:9:9.50:116,9,0	1/1:4,2:6:6.02:121,6,0	1/1:4,1:5:3.01:61,3,0	1/1:6,4:10:9.03:181,9,0	1/1:7,1:8:6.02:121,6,0	1/1:6,3:9:6.02:121,6,0	1/1:5,2:7:3.01:61,3,0	1/1:12,5:17:9.03:182,9,0	0/0:8,0:19:23.58:0,24,150	1/1:8,0:8:0.05:56,0,0	./.	./.	./.	./.	./.	./.	1/1:4,1:5:3.01:46,3,0	1/1:7,2:9:6.02:121,6,0	1/1:7,4:11:9.03:182,9,0	1/1:4,0:4:3.01:56,3,0
chr10	62667283	.	C	CTG	3085.98	PASS	AB=0.891;AC=16;AF=0.286;AN=56;BaseQRankSum=-8.039;DP=627;FS=14.351;HRun=0;HaplotypeScore=83.4607;InbreedingCoeff=0.4646;MQ=65.08;MQ0=7;MQRankSum=1.699;QD=11.35;ReadPosRankSum=0.170;VQSLOD=2.3665;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:14,19:34:45.14:677,45,0	1/1:1,7:8:15.05:233,15,0	0/0:34,0:19:18.04:0,18,194	0/0:22,0:8:2.94:0,3,18	1/1:15,17:33:7.39:567,7,0	0/1:24,1:25:1.54:2,0,405	0/0:14,0:14:36.09:0,36,403	0/1:31,2:33:12.13:124,0,12	1/1:20,0:20:20.94:172,21,0	0/0:23,0:22:41.94:0,42,452	0/0:21,0:23:38.94:0,39,428	0/0:15,0:16:32.88:0,33,329	0/0:19,0:19:38.93:0,39,417	0/0:16,0:16:21.06:0,21,241	0/0:17,0:17:35.93:0,36,393	0/0:19,0:20:38.89:0,39,402	1/1:12,26:38:38.45:861,38,0	0/1:9,17:26:52.33:573,0,52	0/0:18,0:18:18.04:0,18,198	0/0:23,0:22:29.91:0,30,324	0/1:19,1:22:10.76:11,0,290	0/1:13,1:14:25.44:25,0,185	0/0:21,0:21:36.07:0,36,392	0/0:29,0:31:75.03:0,75,829	0/1:15,1:18:22.77:23,0,177	0/0:14,0:15:20.89:0,21,221	0/0:29,0:33:53.95:0,54,539	0/0:9,0:9:12.02:0,12,127
chr10	62667309	.	G	GTGTGTGTGTA	1102.34	PASS	AB=0.968;AC=3;AF=0.054;AN=56;BaseQRankSum=-1.566;DP=604;FS=0.000;HRun=0;HaplotypeScore=187.1632;InbreedingCoeff=0.6200;MQ=60.67;MQ0=6;MQRankSum=-5.581;QD=22.50;ReadPosRankSum=-0.556;VQSLOD=2.5042;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:35:63.35:0,63,766	0/0:8,0:8:17.73:0,18,216	0/0:31,0:16:44.98:0,45,629	0/0:24,0:7:14.68:0,15,111	0/0:28,0:28:56.93:0,57,740	0/0:25,0:24:69.10:0,69,1478	0/0:23,0:23:65.97:0,66,1352	0/0:23,0:23:22.81:0,23,498	1/1:7,10:19:24.08:1184,24,0	0/0:23,0:22:62.92:0,63,1429	0/0:20,0:20:51.10:0,51,1352	0/0:19,0:19:54.48:0,54,1073	0/0:18,0:18:50.92:0,51,1295	0/0:15,0:15:33.04:0,33,802	0/0:20,0:19:51.10:0,51,1318	0/0:20,0:20:29.10:0,29,1204	0/0:28,0:28:61:0,61,787	0/1:29,0:30:22.82:23,0,926	0/0:15,0:15:45.03:0,45,763	0/0:17,0:17:40.32:0,40,1039	0/0:27,0:27:71.83:0,72,1297	0/0:11,0:11:30.06:0,30,664	0/0:23,0:23:57.09:0,57,1281	0/0:38,0:38:99:0,108,2508	0/0:12,0:12:35.88:0,36,774	0/0:18,0:18:48.04:0,48,910	0/0:30,0:30:69.60:0,70,1767	0/0:4,0:4:12.04:0,12,263
chr10	62668095	.	TG	T	12770.31	PASS	AB=0.917;AC=33;AF=0.589;AN=56;BaseQRankSum=18.521;DP=659;FS=0.290;HRun=3;HaplotypeScore=98.1491;InbreedingCoeff=0.9303;MQ=90.85;MQ0=0;MQRankSum=-3.958;QD=33.08;ReadPosRankSum=5.322;VQSLOD=4.6733;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:69.23:0,69,992	0/1:10,1:11:7.09:7,0,359	0/0:25,0:25:75.25:0,75,1066	0/0:28,0:28:74.04:0,74,945	0/0:34,0:34:99:0,99,1405	1/1:0,27:27:81.25:1004,81,0	1/1:2,20:22:57.18:706,57,0	0/0:43,0:43:99:0,126,1749	0/0:24,0:24:69.22:0,69,975	1/1:2,29:31:90.11:1085,90,0	1/1:0,28:28:81.15:982,81,0	1/1:0,13:13:39.12:483,39,0	1/1:0,20:20:54.17:668,54,0	1/1:0,17:17:48.15:595,48,0	1/1:0,26:26:72.23:892,72,0	1/1:0,24:24:66.21:818,66,0	0/0:21,0:21:63.21:0,63,907	0/0:13,0:13:39.11:0,39,540	1/1:5,23:28:69.17:832,69,0	1/1:1,29:30:81.22:982,81,0	1/1:3,18:21:60.17:730,60,0	0/0:19,0:19:57.19:0,57,819	0/0:21,0:21:63.18:0,63,869	0/0:22,0:21:66.21:0,66,933	1/1:0,21:21:51.16:632,51,0	1/1:0,34:34:99:1239,102,0	1/1:1,29:30:81.25:1004,81,0	1/1:0,3:3:9.03:111,9,0
chr10	62668816	.	A	AATCAGGACGATCCCT	2420.75	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-1.625;DP=565;FS=1.025;HRun=0;HaplotypeScore=220.4125;InbreedingCoeff=0.9846;MQ=81.09;MQ0=0;MQRankSum=-5.414;QD=115.27;ReadPosRankSum=0.008;VQSLOD=3.5089;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:90.31:0,90,3706	0/0:11,0:11:30.10:0,30,1321	0/0:17,0:17:30.14:0,30,1261	0/0:15,0:15:33.11:0,33,1222	0/0:21,0:21:60.21:0,60,2547	0/0:23,0:23:63.21:0,63,2368	0/0:20,0:20:48.15:0,48,1809	0/0:34,0:34:93.21:0,93,3193	1/1:8,8:21:39.13:2516,39,0	0/0:19,0:19:48.16:0,48,2109	0/0:13,0:13:39.13:0,39,1671	0/0:21,0:21:57.20:0,57,2358	0/0:23,0:23:66.21:0,66,2406	0/0:18,0:18:51.18:0,51,2073	0/0:22,0:22:63.22:0,63,2516	0/0:21,0:21:60.21:0,60,2412	0/0:30,0:30:81.28:0,81,3533	0/0:23,0:23:63.17:0,63,2567	0/0:19,0:19:36.12:0,36,1421	0/0:15,0:15:42.14:0,42,1529	0/0:28,0:28:72.25:0,72,2954	0/0:9,0:9:24.08:0,24,976	0/0:8,0:8:21.07:0,21,922	0/0:29,0:29:78.25:0,78,3113	0/0:18,0:18:45.14:0,45,1508	0/0:15,0:15:45.15:0,45,1824	0/0:34,0:34:99:0,99,3713	0/0:6,0:6:18.06:0,18,793
chr10	62669074	.	CT	C	4134.74	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=5.363;DP=431;FS=23.108;HRun=13;HaplotypeScore=44.3289;InbreedingCoeff=0.8187;MQ=67.59;MQ0=3;MQRankSum=0.534;QD=13.56;ReadPosRankSum=2.664;VQSLOD=1.9061;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,13:18:26.83:197,27,0	0/0:6,0:8:23.71:0,24,204	0/0:20,1:8:6.38:0,6,36	0/0:12,0:5:1.67:0,2,15	1/1:9,11:21:6.82:174,7,0	1/1:3,15:18:38.76:285,39,0	1/1:3,4:6:8.95:66,9,0	0/0:27,0:30:53.89:0,54,495	1/1:0,7:7:20.88:153,21,0	1/1:4,15:19:45.61:328,46,0	1/1:4,13:19:16.63:267,17,0	1/1:1,12:13:35.79:263,36,0	1/1:4,11:15:4.36:134,4,0	1/1:3,7:10:17.84:131,18,0	1/1:7,4:11:11.89:88,12,0	1/1:3,8:12:19.91:137,20,0	0/0:19,0:19:29.14:0,29,409	0/0:32,2:35:49.21:0,49,755	1/1:3,14:17:41.61:295,42,0	1/1:10,14:27:47.67:315,48,0	1/1:6,8:14:17.84:131,18,0	0/0:1,0:1:3:0,3,29	1/1:0,7:7:17.76:131,18,0	1/1:3,2:5:5.95:44,6,0	1/1:4,16:20:41.75:306,42,0	1/1:3,16:19:47.65:346,48,0	1/1:1,15:16:32.68:240,33,0	1/1:4,6:10:10.97:103,11,0
chr10	62671866	.	T	TG	8271.10	PASS	AB=1.000;AC=41;AF=0.732;AN=56;BaseQRankSum=1.476;DP=471;FS=2.918;HRun=1;HaplotypeScore=167.5876;InbreedingCoeff=0.8447;MQ=90.70;MQ0=0;MQRankSum=-10.920;QD=25.45;ReadPosRankSum=1.746;VQSLOD=4.8653;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:4.10:0,4,380	0/0:7,0:7:21.07:0,21,273	0/0:27,0:27:72.23:0,72,923	0/0:19,0:19:48.12:0,48,586	0/1:20,0:20:15.03:69,0,15	1/1:13,10:23:42.65:405,43,0	1/1:11,13:24:37.93:461,38,0	0/0:27,0:27:75.24:0,75,962	1/1:4,9:13:33.52:403,34,0	1/1:8,6:14:29.38:315,29,0	1/1:10,5:15:24.78:207,25,0	1/1:3,7:10:20.37:244,20,0	1/1:5,10:15:35.86:410,36,0	1/1:6,8:14:10.64:265,11,0	1/1:5,5:10:20.08:219,20,0	1/1:5,6:11:17.18:230,17,0	0/0:29,0:29:87.26:0,87,1101	0/0:18,0:18:51.17:0,51,662	1/1:2,10:12:34.58:448,35,0	1/1:7,8:15:29.82:349,30,0	1/1:4,22:26:65.91:903,66,0	1/1:0,14:14:39.13:583,39,0	1/1:0,11:11:33.11:494,33,0	1/1:1,22:23:60.07:899,60,0	1/1:9,6:14:35.97:349,36,0	1/1:4,12:16:42.46:559,42,0	1/1:8,13:20:32.31:415,32,0	1/1:3,0:3:3.01:42,3,0
chr10	62672167	.	CTTAT	C	5538.55	PASS	AB=0.611;AC=45;AF=0.978;AN=46;BaseQRankSum=-2.243;DP=246;FS=0.000;HRun=0;HaplotypeScore=49.9990;InbreedingCoeff=-0.0892;MQ=57.27;MQ0=3;MQRankSum=1.995;QD=24.40;ReadPosRankSum=0.362;VQSLOD=4.3489;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:4,7:11:22.71:170,0,23	1/1:0,3:3:1.25:46,1,0	./.	./.	1/1:3,7:10:14.95:217,15,0	1/1:5,15:20:30.10:493,30,0	1/1:2,0:2:3:25,3,0	1/1:16,9:25:27.09:425,27,0	1/1:4,3:7:5.99:70,6,0	1/1:5,4:9:12.04:189,12,0	1/1:2,0:2:2.99:24,3,0	1/1:1,3:4:9.03:148,9,0	1/1:4,4:8:12.04:197,12,0	1/1:2,3:5:6.02:99,6,0	1/1:1,5:6:12.04:197,12,0	./.	1/1:8,16:24:48.16:789,48,0	1/1:6,15:21:36.12:591,36,0	1/1:6,11:17:33.06:479,33,0	1/1:4,4:8:12.04:197,12,0	1/1:1,2:3:6.02:99,6,0	./.	1/1:1,3:4:3.01:49,3,0	./.	1/1:2,3:5:3.01:49,3,0	1/1:4,10:14:30.10:493,30,0	1/1:2,7:9:8.90:148,9,0	1/1:3,7:10:21.07:345,21,0
chr10	62673057	.	C	CAG	34751.35	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-7.937;DP=801;FS=15.015;HRun=0;HaplotypeScore=78.8263;InbreedingCoeff=0.9996;MQ=59.38;MQ0=3;MQRankSum=1.211;QD=45.73;ReadPosRankSum=5.492;VQSLOD=5.0550;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,34:36:99:1902,105,0	1/1:0,12:12:36.12:660,36,0	0/0:21,0:15:39.13:0,39,559	0/0:20,0:17:39.08:0,39,518	1/1:1,25:26:63.07:1138,63,0	1/1:1,34:35:90.31:1649,90,0	1/1:2,16:18:48.16:879,48,0	1/1:3,29:34:84.25:1439,84,0	1/1:5,23:28:54.18:990,54,0	1/1:2,21:23:66.23:1200,66,0	1/1:3,29:32:84.20:1501,84,0	1/1:2,31:33:75.26:1374,75,0	1/1:2,23:26:66.23:1207,66,0	1/1:4,25:30:66.23:1208,66,0	1/1:0,36:36:90.31:1650,90,0	1/1:1,31:32:84.29:1540,84,0	1/1:3,43:46:99:2161,109,0	1/1:5,29:33:42.90:1393,43,0	1/1:3,19:22:57.20:1044,57,0	1/1:2,36:39:99:1870,102,0	1/1:0,26:26:66.23:1209,66,0	1/1:2,25:28:75.17:1336,75,0	1/1:1,27:29:68.98:1264,69,0	1/1:0,30:29:81.28:1467,81,0	1/1:0,34:32:81.28:1485,81,0	1/1:2,28:30:84.27:1503,84,0	1/1:5,24:29:63.21:1135,63,0	1/1:1,9:10:30.10:548,30,0
chr10	62673060	.	A	AGC	17600.80	PASS	AB=1.000;AC=48;AF=0.857;AN=56;BaseQRankSum=6.457;DP=788;FS=4.346;HRun=0;HaplotypeScore=134.8820;InbreedingCoeff=0.4308;MQ=59.38;MQ0=3;MQRankSum=0.307;QD=23.59;ReadPosRankSum=11.503;VQSLOD=4.1886;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:35,2:37:83.16:1034,83,0	1/1:13,0:13:17.08:313,17,0	0/0:20,0:14:39.13:0,39,625	0/0:21,0:18:48.15:0,48,718	1/1:26,0:26:40.76:580,41,0	1/1:32,0:33:90.14:878,90,0	1/1:18,0:18:24.10:438,24,0	0/1:36,0:36:1.79:699,0,2	0/1:27,0:27:41.68:466,0,42	1/1:22,1:23:51.02:604,51,0	1/1:28,0:29:81.12:780,81,0	1/1:33,0:32:75.10:718,75,0	1/1:24,0:24:66.06:612,66,0	1/1:26,0:27:48.12:632,48,0	1/1:38,0:38:2.30:742,2,0	0/1:35,0:35:5.71:692,0,6	1/1:44,0:44:99:1181,100,0	1/1:32,0:31:13.11:741,13,0	1/1:21,0:20:39.07:517,39,0	1/1:36,0:36:84.19:959,84,0	1/1:28,0:28:22.21:596,22,0	1/1:27,0:27:48.35:662,48,0	1/1:27,0:27:68.84:670,69,0	1/1:31,0:30:58.12:747,58,0	1/1:33,0:31:81.08:765,81,0	1/1:29,0:29:54.32:707,54,0	0/1:29,0:29:26.72:550,0,27	1/1:9,1:10:30.05:318,30,0
chr10	62674663	.	G	GT	1504.20	PASS	AB=0.749;AC=8;AF=0.143;AN=56;BaseQRankSum=-6.678;DP=676;FS=5.753;HRun=12;HaplotypeScore=82.0391;InbreedingCoeff=0.4545;MQ=68.07;MQ0=1;MQRankSum=0.774;QD=10.23;ReadPosRankSum=-2.475;VQSLOD=2.5911;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:38:71.54:0,72,495	1/1:0,6:6:18.03:175,18,0	0/0:13,0:12:14.53:0,15,97	0/0:8,0:7:7.93:0,8,49	0/1:19,4:24:2.70:3,0,299	0/0:17,0:19:39.82:0,40,274	0/0:19,0:19:32.75:0,33,239	0/1:16,20:37:8.83:381,0,9	0/0:8,0:8:14.88:0,15,109	0/0:37,2:39:25.03:0,25,508	0/1:19,3:22:7.71:8,0,276	0/0:18,1:21:13.09:0,13,224	0/0:28,1:29:54.09:0,54,483	0/0:24,0:24:51.74:0,52,383	0/0:29,0:30:61.59:0,62,443	0/0:15,0:16:25.82:0,26,181	1/1:11,29:40:83:924,83,0	0/1:7,9:18:58.48:154,0,58	0/0:22,0:22:38.71:0,39,284	0/0:37,2:41:23.07:0,23,475	0/0:12,0:13:19.84:0,20,137	0/0:20,0:24:35.33:0,35,319	0/0:19,1:22:20.58:0,21,300	0/0:16,0:17:40.76:0,41,286	0/0:33,3:36:57.26:0,57,582	0/0:30,0:30:56.47:0,56,415	0/0:29,2:31:48.32:0,48,518	0/0:26,2:28:18.25:0,18,298
chr10	62675508	.	C	CGT	13651.95	PASS	AB=0.646;AC=33;AF=0.589;AN=56;BaseQRankSum=-12.780;DP=758;FS=0.000;HRun=0;HaplotypeScore=87.4780;InbreedingCoeff=0.4472;MQ=63.26;MQ0=10;MQRankSum=-0.788;QD=25.42;ReadPosRankSum=3.083;VQSLOD=5.7688;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:78.21:0,78,915	0/1:16,1:17:9.04:9,0,395	0/0:22,0:10:18.02:0,18,196	0/0:23,0:15:11.99:0,12,113	0/0:28,0:28:71.73:0,72,909	1/1:4,19:22:2.94:542,3,0	1/1:10,19:29:18.02:768,18,0	0/0:37,0:36:39.07:0,39,444	0/0:32,0:32:69.17:0,69,815	1/1:8,24:32:36.01:1018,36,0	1/1:4,30:33:51.17:818,51,0	0/1:11,19:30:12.13:805,0,12	1/1:6,21:26:5.96:590,6,0	1/1:7,22:30:69.23:1088,69,0	0/1:10,18:27:62.70:533,0,63	0/1:7,19:26:15.18:757,0,15	0/0:29,0:29:75.15:0,75,877	0/0:13,0:14:26.88:0,27,288	1/1:9,11:19:30.07:437,30,0	1/1:1,22:23:51.17:819,51,0	0/1:8,18:26:21.11:671,0,21	1/1:8,32:39:11.96:686,12,0	1/1:4,20:23:11.98:685,12,0	0/1:7,12:18:66.34:488,0,66	0/1:8,22:31:27.23:581,0,27	1/1:8,20:28:60.17:915,60,0	1/1:13,27:38:35.95:1054,36,0	1/1:0,10:10:24.08:385,24,0
chr10	62676191	.	C	CT	1470.21	PASS	AB=0.950;AC=10;AF=0.179;AN=56;BaseQRankSum=-6.172;DP=586;FS=7.763;HRun=10;HaplotypeScore=57.5107;InbreedingCoeff=0.7300;MQ=60.98;MQ0=4;MQRankSum=0.392;QD=13.01;ReadPosRankSum=-0.450;VQSLOD=2.8376;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:68.90:0,69,565	1/1:1,9:10:24.06:256,24,0	0/1:17,0:10:11.15:11,0,72	0/0:15,0:10:13.55:0,14,165	0/0:39,0:40:84.46:0,84,802	0/0:23,1:24:30.85:0,31,449	0/0:14,0:13:26.93:0,27,218	1/1:15,20:34:32.50:550,33,0	0/0:17,0:17:44.93:0,45,366	0/0:24,0:24:50.91:0,51,418	0/0:17,0:17:41.93:0,42,345	0/0:14,0:15:34.95:0,35,274	0/0:20,0:20:50.66:0,51,402	0/0:20,0:19:37.16:0,37,299	0/0:25,0:25:56.91:0,57,468	0/0:16,0:17:37.97:0,38,299	1/1:9,15:22:26.39:455,26,0	1/1:5,13:17:20.06:353,20,0	0/0:18,0:17:35.70:0,36,291	0/0:31,0:31:80.87:0,81,661	0/1:8,1:9:11.04:11,0,124	0/0:12,0:12:23.97:0,24,197	0/0:24,1:25:30.63:0,31,459	0/0:14,0:14:29.91:0,30,241	0/0:28,0:28:62.87:0,63,515	0/0:35,0:34:86.89:0,87,714	0/0:28,0:29:73.09:0,73,588	0/0:1,0:1:3:0,3,25
chr10	62682341	.	AGTAT	A	14018.04	PASS	AB=0.589;AC=48;AF=0.889;AN=54;BaseQRankSum=0.951;DP=708;FS=2.134;HRun=0;HaplotypeScore=167.9924;InbreedingCoeff=0.4974;MQ=61.41;MQ0=1;MQRankSum=-1.436;QD=20.49;ReadPosRankSum=1.941;VQSLOD=4.9225;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:10,15:25:33.11:426,0,33	1/1:1,9:10:18.06:287,18,0	0/0:12,0:9:3.48:0,3,52	./.	1/1:12,14:26:36.11:573,36,0	1/1:7,20:27:54.18:860,54,0	1/1:8,6:14:5.98:96,6,0	1/1:28,16:44:48.12:610,48,0	1/1:16,18:34:63.18:941,63,0	1/1:8,19:27:57.14:830,57,0	1/1:5,14:19:17.91:286,18,0	1/1:7,20:27:48.16:764,48,0	1/1:8,21:29:42.14:669,42,0	1/1:14,18:32:39.13:621,39,0	1/1:13,21:34:51.17:812,51,0	1/1:6,30:36:69.24:1099,69,0	1/1:8,18:26:42.14:669,42,0	1/1:5,10:15:18.06:287,18,0	1/1:11,6:16:18:282,18,0	1/1:15,22:37:50.93:785,51,0	1/1:14,24:38:51.13:785,51,0	0/1:9,0:31:0.01:1,0,0	0/1:6,0:20:0.01:0,0,0	0/1:4,0:19:0.21:0,0,0	1/1:12,16:28:36.12:573,36,0	1/1:7,15:22:45.15:713,45,0	1/1:16,26:42:54.18:860,54,0	1/1:1,4:5:12.04:191,12,0
chr10	62682409	.	C	CAT	2436.48	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-2.309;DP=672;FS=6.364;HRun=0;HaplotypeScore=188.5903;InbreedingCoeff=0.9260;MQ=61.33;MQ0=1;MQRankSum=-2.115;QD=24.12;ReadPosRankSum=0.665;VQSLOD=3.9975;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,22:34:46.91:796,47,0	0/0:13,0:13:36.09:0,36,522	0/0:15,0:7:6.13:0,6,81	0/0:14,0:6:8.13:0,8,85	1/1:11,27:38:47.18:987,47,0	0/0:30,0:30:16.74:0,17,374	0/0:17,0:17:41.65:0,42,291	0/0:36,0:36:99:0,102,1459	1/1:7,21:28:48.40:796,48,0	0/0:31,0:31:85.11:0,85,523	0/0:20,0:20:14.02:0,14,216	0/0:27,0:27:30.10:0,30,349	0/0:20,0:20:41.59:0,42,287	0/0:34,0:34:57.59:0,58,561	0/0:26,0:26:40.60:0,41,407	0/0:27,0:27:65.40:0,65,453	0/0:15,0:15:38.82:0,39,589	0/0:10,0:10:18.06:0,18,267	0/0:18,0:17:35.90:0,36,259	0/0:28,0:28:49.31:0,49,476	0/0:29,1:30:80.34:0,80,566	0/0:32,0:32:62.97:0,63,918	0/0:27,0:27:56.86:0,57,850	0/0:18,0:18:20.78:0,21,299	0/0:20,0:20:22.74:0,23,281	0/0:23,0:23:59.50:0,59,378	0/0:29,0:29:66.03:0,66,475	0/0:11,0:11:28.86:0,29,200
chr10	62684452	.	CTGTGTGTG	C	122.05	PASS	AB=0.964;AC=10;AF=0.200;AN=50;BaseQRankSum=4.596;DP=624;FS=5.501;HRun=0;HaplotypeScore=153.9737;InbreedingCoeff=0.4812;MQ=64.67;MQ0=27;MQRankSum=-4.349;QD=1.08;ReadPosRankSum=0.129;VQSLOD=2.3522;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:29,3:29:2.97:21,3,0	1/1:9,0:9:3.01:56,3,0	./.	./.	0/0:14,6:20:1.55:0,2,4	0/0:19,0:18:9.01:0,9,120	0/0:18,0:18:6.49:0,6,226	./.	0/1:12,0:13:25.42:38,0,25	0/0:25,0:25:24.53:0,25,480	0/0:19,0:17:21.04:0,21,610	0/0:17,0:18:5.97:0,6,82	0/0:21,0:20:18.95:0,19,435	0/0:22,0:22:8.05:0,8,265	0/0:23,0:20:11.81:0,12,371	0/0:18,0:17:12.03:0,12,309	1/1:29,0:27:3.01:56,3,0	1/1:19,0:16:5.96:75,6,0	0/0:28,0:28:15.52:0,16,384	0/1:11,0:11:0.20:0,0,0	0/0:40,0:39:42.13:0,42,1064	0/0:13,0:13:6.01:0,6,62	0/0:6,0:6:5.95:0,6,44	0/0:15,0:18:14.99:0,15,145	0/0:19,0:18:2.55:0,3,121	0/0:32,0:30:24.08:0,24,725	0/0:34,0:29:33.11:0,33,850	0/0:19,0:15:21.07:0,21,668
chr10	62684487	.	TGTGTGTGTGTGTGTGTGG	T	1066.31	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=1.521;DP=572;FS=4.977;HRun=0;HaplotypeScore=212.1292;InbreedingCoeff=0.8782;MQ=50.79;MQ0=40;MQRankSum=-1.250;QD=14.41;ReadPosRankSum=-2.608;VQSLOD=1.4432;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:31:56.63:0,57,1389	1/1:1,11:11:2.84:159,3,0	0/0:25,0:13:27.91:0,28,366	0/0:19,0:8:10.17:0,10,130	0/0:30,0:30:56.99:0,57,1716	0/0:19,0:18:27.97:0,28,712	0/0:16,0:16:35.27:0,35,1504	1/1:15,0:13:32.21:357,32,0	0/0:20,0:19:43.51:0,44,1500	0/0:16,0:15:42.09:0,42,1744	0/0:20,0:18:38.89:0,39,1880	0/0:19,0:17:36.51:0,37,1021	0/0:13,0:12:28.78:0,29,1313	0/0:20,0:19:35.03:0,35,1074	0/0:21,0:18:41.98:0,42,1717	0/0:16,0:15:31.02:0,31,1347	1/1:2,24:26:3.01:159,3,0	1/1:11,2:12:34.51:533,35,0	0/0:17,0:17:51.06:0,51,1607	0/0:17,0:17:30.35:0,30,504	0/0:40,0:38:64.06:0,64,3575	0/0:12,0:12:33.05:0,33,738	0/0:14,0:13:33.08:0,33,1427	0/0:32,0:32:81.52:0,82,2045	0/0:17,0:15:20.77:0,21,559	0/0:17,0:16:48.15:0,48,2633	0/0:29,0:24:51.13:0,51,2810	0/0:15,0:9:24.08:0,24,1729
chr10	62685610	.	G	GGTGT	4207.87	PASS	AB=0.745;AC=31;AF=0.620;AN=50;BaseQRankSum=-5.196;DP=743;FS=0.648;HRun=0;HaplotypeScore=150.1883;InbreedingCoeff=0.4104;MQ=63.32;MQ0=20;MQRankSum=-0.118;QD=8.52;ReadPosRankSum=-1.381;VQSLOD=2.4958;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:35:25.41:25,0,35	0/0:7,0:9:6.42:0,6,47	./.	./.	1/1:12,0:21:10.62:49,11,0	0/1:8,8:16:15.64:400,0,16	1/1:22,9:39:23.55:449,24,0	0/0:12,0:17:6.46:0,6,49	0/0:23,0:27:36.08:0,36,479	1/1:21,0:20:16.38:219,16,0	1/1:6,5:13:12.04:266,12,0	1/1:17,1:31:5.87:122,6,0	1/1:14,2:30:18.81:316,19,0	1/1:14,2:28:11.66:151,12,0	1/1:15,6:31:29.31:529,29,0	1/1:12,1:21:14.52:201,15,0	0/0:17,0:41:51.08:0,51,497	0/0:12,0:23:11.70:0,12,221	1/1:19,0:16:9.03:172,9,0	1/1:13,2:17:6.02:142,6,0	0/1:59,26:93:94.75:488,0,95	0/0:5,0:21:8.66:0,9,83	0/0:4,0:11:5.82:0,6,56	./.	0/1:7,1:15:27.72:28,0,41	0/1:27,1:28:26.36:205,0,26	1/1:16,0:16:0.22:20,0,0	1/1:1,8:10:20.81:426,21,0
chr10	62685953	.	G	GT	1611.20	PASS	AB=0.951;AC=38;AF=0.679;AN=56;BaseQRankSum=5.759;DP=486;FS=4.749;HRun=2;HaplotypeScore=114.8072;InbreedingCoeff=0.4140;MQ=77.13;MQ0=9;MQRankSum=-0.616;QD=4.72;ReadPosRankSum=0.622;VQSLOD=0.6207;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:19:6.29:134,6,0	0/0:7,0:7:7.54:0,8,28	0/0:69,0:17:14.78:0,15,214	0/1:66,1:29:67.50:68,0,160	1/1:19,0:19:19.08:161,19,0	1/1:12,0:12:24.70:135,25,0	1/1:11,0:11:0.16:49,0,0	0/1:22,0:21:9.60:10,0,46	1/1:7,0:8:13.35:69,13,0	1/1:17,0:17:1.26:74,1,0	1/1:10,0:10:8.39:53,8,0	0/1:10,0:10:5.71:61,0,6	0/1:9,0:9:2.01:53,0,2	0/1:6,0:7:2.41:78,0,2	1/1:8,0:8:15.98:66,16,0	1/1:12,0:13:29.50:129,30,0	0/0:30,1:31:11.19:0,11,108	0/0:11,0:11:13.12:0,13,42	1/1:10,0:10:9.06:50,9,0	1/1:12,0:12:16.77:77,17,0	1/1:8,0:8:8.77:52,9,0	0/1:10,2:12:39.29:39,0,51	0/0:16,0:16:12.79:0,13,62	0/0:9,0:9:13.13:0,13,63	1/1:15,0:15:3.23:71,3,0	1/1:20,0:19:29.91:140,30,0	1/1:24,0:24:30.85:167,31,0	1/1:4,0:4:11.10:54,11,0
chr10	62685955	.	TG	T	5621.25	PASS	AB=0.971;AC=53;AF=0.946;AN=56;BaseQRankSum=-3.836;DP=481;FS=0.000;HRun=1;HaplotypeScore=100.5006;InbreedingCoeff=0.4891;MQ=76.57;MQ0=9;MQRankSum=-0.894;QD=13.64;ReadPosRankSum=2.358;VQSLOD=4.0520;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:18,1:19:34.96:268,35,0	1/1:1,6:7:13.97:161,14,0	0/0:65,3:16:22.66:0,23,151	0/1:65,2:29:76.05:76,0,138	1/1:18,0:18:39.55:253,40,0	1/1:11,1:12:25.78:158,26,0	1/1:8,3:11:25.72:179,26,0	1/1:10,13:22:60.14:721,60,0	1/1:9,0:8:19.78:121,20,0	1/1:17,1:18:34.46:293,34,0	1/1:9,1:10:19.51:149,20,0	1/1:9,1:10:17.59:139,18,0	1/1:7,2:9:19.69:158,20,0	1/1:7,0:7:10.10:84,10,0	1/1:8,0:8:20.64:135,21,0	1/1:13,0:13:36.93:226,37,0	1/1:9,21:30:47.43:594,47,0	1/1:2,9:11:20.65:271,21,0	1/1:11,0:11:23.50:160,23,0	1/1:9,2:11:28.65:206,29,0	1/1:7,1:8:17.55:122,18,0	1/1:10,1:11:10.73:99,11,0	1/1:15,1:16:2.49:79,2,0	1/1:9,0:9:11.71:118,12,0	1/1:14,1:15:23.05:135,23,0	1/1:19,0:18:46.40:305,46,0	1/1:19,3:22:48.18:355,48,0	1/1:7,0:7:11:57,11,0
chr10	62685965	.	T	TTG	6035.26	PASS	AB=0.753;AC=37;AF=0.661;AN=56;BaseQRankSum=-1.745;DP=464;FS=8.344;HRun=0;HaplotypeScore=102.5767;InbreedingCoeff=0.5797;MQ=72.03;MQ0=10;MQRankSum=-1.113;QD=16.49;ReadPosRankSum=2.826;VQSLOD=4.6781;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,2:17:17.97:235,18,0	0/0:7,0:7:3.34:0,3,126	0/1:59,0:12:8.83:9,0,85	0/1:55,0:23:6.28:6,0,146	1/1:1,2:16:34.19:324,34,0	1/1:1,8:10:21.02:300,21,0	1/1:6,4:12:16.61:196,17,0	0/0:20,0:19:44.08:0,44,411	1/1:2,4:7:15.02:198,15,0	1/1:8,11:19:8.78:414,9,0	1/1:2,13:16:34.50:275,34,0	0/1:3,4:8:7.82:209,0,8	0/1:4,6:10:6.69:229,0,7	0/1:2,1:8:13.67:126,0,14	1/1:0,9:9:18.06:299,18,0	1/1:1,7:12:33.10:480,33,0	0/0:27,0:27:68.59:0,69,695	0/0:11,0:11:14.53:0,15,244	1/1:4,8:13:30.06:380,30,0	1/1:4,7:12:7.13:322,7,0	1/1:4,1:8:8.90:134,9,0	0/0:10,0:10:25.90:0,26,267	0/0:17,0:17:32.97:0,33,341	0/0:6,0:6:14.53:0,15,171	1/1:3,12:16:15.88:332,16,0	1/1:4,17:21:50.91:705,51,0	1/1:7,17:26:53.09:719,53,0	1/1:0,1:7:11.90:143,12,0
chr10	62686023	.	AT	A	598.33	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=4.292;DP=393;FS=0.739;HRun=9;HaplotypeScore=60.4645;InbreedingCoeff=0.8951;MQ=72.30;MQ0=0;MQRankSum=-0.727;QD=18.70;ReadPosRankSum=1.188;VQSLOD=3.9558;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:39.12:0,39,450	0/0:2,0:2:5.93:0,6,51	0/0:11,0:7:11.87:0,12,92	0/0:12,0:12:9.30:0,9,130	0/0:17,0:17:48.07:0,48,526	0/0:13,0:13:33.10:0,33,381	0/0:9,0:9:24.06:0,24,266	0/0:25,0:25:54.12:0,54,600	0/0:10,0:10:21:0,21,217	0/0:14,0:14:39.12:0,39,450	0/0:30,0:30:84.25:0,84,965	0/0:11,0:11:30.09:0,30,346	0/0:5,0:5:9.03:0,9,104	0/0:10,0:10:18.04:0,18,198	0/0:7,0:7:12.02:0,12,128	0/0:18,0:18:42.07:0,42,461	0/0:21,0:21:48.13:0,48,545	0/0:11,0:11:27.08:0,27,311	0/0:21,0:21:49:0,49,536	0/0:18,0:18:51.11:0,51,559	0/0:13,0:13:39.05:0,39,425	1/1:1,6:7:18.01:165,18,0	1/1:1,17:18:45.01:409,45,0	1/1:1,6:7:18.01:165,18,0	0/0:11,0:12:23.79:0,24,224	0/0:16,0:16:45.09:0,45,498	0/0:22,0:22:39.06:0,39,408	0/0:14,0:14:39.06:0,39,408
chr10	62687087	.	CAATAAATAAATAAATAAATAAATA	C	4387.17	PASS	AB=0.762;AC=23;AF=0.548;AN=42;BaseQRankSum=-0.305;DP=235;FS=8.123;HRun=0;HaplotypeScore=128.5691;InbreedingCoeff=0.5735;MQ=45.59;MQ0=12;MQRankSum=-2.995;QD=39.52;ReadPosRankSum=4.035;VQSLOD=3.1680;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:5:6:0,6,93	0/0:3,0:4:6.02:0,6,385	./.	./.	0/0:7,0:7:6.02:0,6,164	1/1:10,1:11:21.07:1011,21,0	./.	0/0:37,0:33:42.14:0,42,1489	./.	1/1:9,0:9:9.03:334,9,0	1/1:5,4:8:3.01:90,3,0	1/1:5,0:5:3.01:174,3,0	1/1:5,1:6:8.82:473,9,0	./.	1/1:10,0:9:3.01:92,3,0	./.	0/0:3,0:14:27.09:0,27,2262	0/0:8,0:9:15.05:0,15,771	0/0:7,0:2:3:0,3,27	1/1:6,0:6:6.02:178,6,0	1/1:3,0:3:3.01:100,3,0	./.	0/0:7,0:7:6.01:0,6,60	0/0:4,0:4:3.01:0,3,143	0/1:11,5:14:99:183,0,158	1/1:11,0:11:18.06:799,18,0	1/1:14,0:13:9.03:361,9,0	1/1:6,2:7:12.04:593,12,0
chr10	62687110	.	T	TCTTTA	1824.20	PASS	AB=1.000;AC=23;AF=0.500;AN=46;BaseQRankSum=2.792;DP=136;FS=11.198;HRun=0;HaplotypeScore=43.2013;InbreedingCoeff=0.5957;MQ=44.14;MQ0=5;MQRankSum=-3.487;QD=38.81;ReadPosRankSum=2.577;VQSLOD=1.8233;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:4:12:0,12,185	0/0:2,0:2:6.02:0,6,116	0/0:2,0:1:1.82:0,2,5	./.	0/0:4,0:4:9.03:0,9,209	1/1:8,0:7:21.05:401,21,0	./.	0/0:33,0:29:84.26:0,84,1743	0/0:1,0:1:3.01:0,3,70	1/1:3,1:4:9.03:191,9,0	1/1:4,0:4:3.01:90,3,0	1/1:1,0:1:3.01:30,3,0	1/1:2,1:3:9.01:151,9,0	./.	1/1:0,1:2:3:92,3,0	./.	0/0:22,0:21:54.16:0,54,930	0/0:11,0:10:30.10:0,30,630	0/0:2,0:2:3:0,3,27	1/1:2,0:2:6.02:101,6,0	1/1:2,0:2:3.01:100,3,0	./.	0/0:3,0:3:9.02:0,9,157	0/0:1,0:1:3.01:0,3,70	0/1:6,0:6:1.85:2,0,65	1/1:5,2:6:18.06:437,18,0	1/1:2,1:3:9.03:219,9,0	1/1:5,0:4:3.02:171,3,0
chr10	62687115	.	AAAT	A	991.68	PASS	AB=0.900;AC=18;AF=0.360;AN=50;BaseQRankSum=7.140;DP=157;FS=12.194;HRun=0;HaplotypeScore=46.2046;InbreedingCoeff=-0.0790;MQ=47.35;MQ0=4;MQRankSum=-3.998;QD=14.58;ReadPosRankSum=1.555;VQSLOD=1.8116;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:3:9.03:0,9,107	0/0:3,0:3:9.03:0,9,122	0/1:3,0:3:11.84:12,0,32	./.	0/0:4,0:4:6.02:0,6,72	0/1:8,5:12:99:290,0,143	./.	0/0:32,0:28:75.24:0,75,1167	0/0:1,0:1:3.01:0,3,36	0/1:4,1:5:59.28:73,0,59	1/1:4,0:4:3.01:35,3,0	1/1:0,1:1:3.01:51,3,0	1/1:2,1:3:9.03:137,9,0	0/0:4,0:2:6.02:0,6,72	0/1:2,0:2:27.99:28,0,30	0/0:1,0:1:3.01:0,3,36	0/0:23,0:22:60.19:0,60,873	0/0:12,0:11:33.10:0,33,460	0/0:4,0:4:12.04:0,12,144	1/1:0,1:1:3.01:51,3,0	0/1:4,0:4:14.89:15,0,63	./.	0/1:2,0:2:8.01:8,0,17	0/0:1,0:1:3.01:0,3,69	0/1:7,0:7:19.07:19,0,95	0/1:5,4:8:47.82:252,0,48	0/1:6,1:7:71.72:72,0,126	0/1:6,1:6:53.90:98,0,54
chr10	62687139	.	A	AT	246.09	PASS	AB=0.859;AC=8;AF=0.167;AN=48;BaseQRankSum=5.917;DP=172;FS=3.959;HRun=3;HaplotypeScore=50.0079;InbreedingCoeff=-0.1795;MQ=58.82;MQ0=2;MQRankSum=-4.688;QD=5.13;ReadPosRankSum=-0.309;VQSLOD=0.2008;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:4:12.04:0,12,168	0/0:2,0:2:6.02:0,6,84	0/0:5,0:5:4.50:0,4,147	0/1:3,0:1:0:0,0,0	0/0:4,0:4:12.04:0,12,168	0/1:10,2:11:99:106,0,302	./.	0/0:29,0:29:84.11:0,84,1065	0/0:2,0:2:6.02:0,6,83	0/1:4,1:5:32.68:33,0,152	0/0:6,0:6:3.01:0,3,42	0/1:1,1:2:35.42:42,0,35	0/1:2,1:3:32.77:83,0,33	0/0:3,0:2:6.02:0,6,84	0/0:2,0:2:6.02:0,6,83	0/0:1,0:1:3.01:0,3,42	0/0:31,0:30:78.69:0,79,1128	0/0:12,0:11:33.04:0,33,419	0/0:6,0:6:18.06:0,18,251	./.	0/0:4,0:4:9.03:0,9,125	./.	0/0:4,0:4:9.03:0,9,126	./.	0/1:8,0:8:12.02:12,0,92	0/1:7,1:8:64.37:64,0,147	0/1:6,1:7:25.54:26,0,230	0/0:8,0:7:19.64:0,20,225
chr10	62687159	.	T	TATAA	6618.45	PASS	AB=1.000;AC=37;AF=0.712;AN=52;BaseQRankSum=-5.187;DP=208;FS=0.666;HRun=0;HaplotypeScore=38.6308;InbreedingCoeff=0.7355;MQ=64.89;MQ0=0;MQRankSum=-3.726;QD=51.71;ReadPosRankSum=-1.564;VQSLOD=4.5265;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,7:10:21.07:497,21,0	0/0:3,0:3:6.02:0,6,100	0/0:6,0:6:3.48:0,3,50	0/1:5,0:2:1.70:2,0,45	1/1:0,5:5:15.05:352,15,0	1/1:5,11:18:39.09:905,39,0	1/1:0,1:2:3.01:74,3,0	0/0:25,0:25:39.10:0,39,577	1/1:1,4:5:15.05:365,15,0	1/1:2,3:5:12.04:296,12,0	1/1:2,3:6:15.01:312,15,0	1/1:1,1:3:5.98:94,6,0	1/1:3,2:6:12.04:295,12,0	1/1:2,4:6:15.01:316,15,0	1/1:0,3:5:9.03:222,9,0	1/1:0,2:2:6.02:146,6,0	0/0:29,0:29:69.71:0,70,1150	0/0:11,0:10:30.10:0,30,500	1/1:2,8:11:33.10:694,33,0	./.	1/1:1,3:4:9.03:222,9,0	./.	0/0:4,0:4:12.04:0,12,200	0/0:2,0:2:2.97:0,3,20	1/1:4,2:6:6.02:148,6,0	1/1:4,6:10:24.08:575,24,0	1/1:1,7:9:24.08:588,24,0	1/1:0,7:8:21.07:517,21,0
chr10	62687822	.	G	GT	303.01	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-1.457;DP=509;FS=7.077;HRun=10;HaplotypeScore=54.3512;InbreedingCoeff=0.8158;MQ=70.49;MQ0=1;MQRankSum=-1.931;QD=20.20;ReadPosRankSum=-1.516;VQSLOD=3.8719;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,1:37:51.10:0,51,610	0/0:3,0:3:2.98:0,3,25	0/0:21,0:17:23.76:0,24,179	0/0:16,0:14:13.57:0,14,92	0/0:22,0:24:51.97:0,52,405	0/0:20,0:20:44.91:0,45,366	0/0:22,0:23:61.92:0,62,495	0/0:18,0:17:44.94:0,45,368	1/1:2,12:15:38.97:398,39,0	0/0:19,0:19:23.76:0,24,343	0/0:21,0:23:51.98:0,52,406	0/0:12,0:12:29.95:0,30,246	0/0:16,0:16:41.95:0,42,345	0/0:11,0:12:26:0,26,203	0/0:20,0:20:47.89:0,48,390	0/0:19,0:19:44.88:0,45,363	0/0:22,0:23:64.93:0,65,517	0/0:20,0:20:41.89:0,42,341	0/0:16,0:16:38.94:0,39,320	0/0:10,0:10:23.97:0,24,197	0/0:13,0:13:38.92:0,39,314	0/0:14,0:14:23.96:0,24,197	0/0:16,0:18:43.98:0,44,350	0/0:21,0:21:56.92:0,57,468	0/0:18,0:18:41.91:0,42,339	0/0:24,0:25:55.94:0,56,447	0/0:22,1:22:30.94:0,31,461	0/0:10,0:10:14.95:0,15,123
chr10	62687952	.	CG	C	3615.37	PASS	AB=1.000;AC=51;AF=0.944;AN=54;BaseQRankSum=-3.907;DP=363;FS=12.225;HRun=3;HaplotypeScore=45.2869;InbreedingCoeff=0.2893;MQ=48.84;MQ0=22;MQRankSum=2.371;QD=11.26;ReadPosRankSum=-0.154;VQSLOD=0.2884;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:25:34.27:253,34,0	1/1:6,0:6:10.23:77,10,0	./.	0/0:21,0:7:3.45:0,3,23	1/1:7,13:20:25.89:162,26,0	1/1:7,0:7:6.80:43,7,0	1/1:17,0:17:33.58:237,34,0	1/1:9,0:9:17.85:125,18,0	1/1:11,0:11:6:51,6,0	1/1:17,0:17:34.42:271,34,0	1/1:17,0:16:32.88:270,33,0	1/1:8,0:7:13.56:110,14,0	1/1:14,0:13:29.83:246,30,0	1/1:8,0:6:8.85:69,9,0	1/1:5,0:5:6:51,6,0	1/1:10,0:10:22.20:185,22,0	1/1:22,0:21:10.47:170,10,0	1/1:7,0:5:8.96:67,9,0	1/1:15,0:13:1.60:127,2,0	0/1:11,0:11:0.68:115,0,1	1/1:11,0:9:16.81:125,17,0	1/1:2,10:12:17.73:114,18,0	1/1:15,0:15:18.85:144,19,0	1/1:9,0:9:11.98:97,12,0	1/1:14,0:14:9.30:175,9,0	1/1:9,0:9:13.55:112,14,0	1/1:9,0:8:14.98:124,15,0	1/1:11,0:8:12.45:99,12,0
chr10	62687954	.	GGAAAAAAAAA	G	1878.37	PASS	AB=0.995;AC=26;AF=0.464;AN=56;BaseQRankSum=-8.297;DP=403;FS=24.296;HRun=0;HaplotypeScore=100.0993;InbreedingCoeff=-0.7622;MQ=48.19;MQ0=23;MQRankSum=4.835;QD=5.43;ReadPosRankSum=4.122;VQSLOD=-0.0015;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:32,0:30:93.91:94,0,1617	0/1:8,0:8:49.86:50,0,476	0/0:24,0:1:3.01:0,3,44	0/0:25,0:7:4.51:0,5,87	0/1:17,0:17:71.25:71,0,448	0/0:8,0:8:15.05:0,15,477	0/1:20,0:21:99:117,0,854	0/1:13,0:14:31.47:31,0,553	1/1:0,11:12:3.68:184,4,0	0/1:16,0:16:99:121,0,645	0/1:14,0:14:99:217,0,147	0/1:7,0:6:87.23:87,0,191	0/1:14,0:13:46.69:201,0,47	0/1:6,0:4:39.23:39,0,70	0/1:7,0:7:13.63:14,0,357	0/1:11,0:11:99:131,0,457	0/1:29,0:28:18.59:19,0,1645	0/1:9,0:7:52.41:52,0,241	0/1:18,0:16:27.21:27,0,874	0/1:11,0:11:71.32:71,0,583	0/1:14,0:12:67.91:68,0,599	0/1:13,0:13:87.27:87,0,302	0/1:12,0:12:90.61:91,0,452	0/1:13,0:13:3.14:3,0,344	0/1:16,0:16:98.53:99,0,660	0/1:10,0:10:24.81:25,0,648	0/1:11,0:10:93.38:93,0,583	0/1:10,0:8:36.18:36,0,117
chr10	62688084	.	G	GT	88.98	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=0.385;DP=389;FS=4.452;HRun=1;HaplotypeScore=68.5500;InbreedingCoeff=0.8566;MQ=75.10;MQ0=1;MQRankSum=0.019;QD=8.90;ReadPosRankSum=-0.614;VQSLOD=0.8418;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:10.58:0,11,171	0/0:4,0:4:11.94:0,12,119	0/0:10,0:10:12.75:0,13,154	0/0:9,0:9:25.69:0,26,215	0/0:14,0:14:13.58:0,14,219	0/0:15,0:15:38.87:0,39,302	0/0:18,0:18:45.62:0,46,335	0/0:19,0:20:43.94:0,44,468	1/1:1,9:10:14.96:177,15,0	0/0:10,0:10:29.95:0,30,246	0/0:9,0:9:20.96:0,21,168	0/0:15,0:15:44.67:0,45,332	0/0:10,0:10:29.89:0,30,231	0/0:10,0:10:23.88:0,24,181	0/0:10,0:11:26.81:0,27,205	0/0:11,0:12:35.92:0,36,285	0/0:31,0:30:83.90:0,84,874	0/0:8,0:8:21.03:0,21,239	0/0:23,0:23:65.72:0,66,511	0/0:10,0:10:26.28:0,26,194	0/0:26,0:26:47.82:0,48,367	0/0:14,0:14:32.89:0,33,259	0/0:13,0:13:22.12:0,22,188	0/0:25,0:25:62.80:0,63,492	0/0:12,0:12:35.92:0,36,285	0/0:11,0:11:32.92:0,33,265	0/0:12,0:12:32.37:0,32,219	0/0:8,0:8:20.96:0,21,169
chr10	62688085	.	TC	T	4098.01	PASS	AB=0.967;AC=41;AF=0.732;AN=56;BaseQRankSum=1.222;DP=384;FS=8.024;HRun=11;HaplotypeScore=49.6974;InbreedingCoeff=0.7245;MQ=74.23;MQ0=1;MQRankSum=1.958;QD=13.26;ReadPosRankSum=1.368;VQSLOD=3.0250;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:11,1:16:0.70:1,0,113	0/0:4,0:4:9.02:0,9,95	0/0:6,1:9:10.91:0,11,68	0/1:9,0:9:35.37:35,0,52	0/0:12,0:14:26.65:0,27,219	1/1:4,10:15:25.99:203,26,0	1/1:4,14:18:41.87:335,42,0	0/1:21,1:23:22.22:22,0,169	0/0:9,0:9:11.63:0,12,64	1/1:5,5:10:14.97:123,15,0	1/1:2,6:8:14.98:123,15,0	1/1:7,8:15:25.97:203,26,0	1/1:2,9:11:26.97:222,27,0	1/1:1,8:9:20.97:172,21,0	1/1:3,8:11:23.97:197,24,0	1/1:2,10:12:32.96:271,33,0	0/0:30,1:30:29.49:0,29,510	0/0:8,0:8:21.02:0,21,207	1/1:5,17:22:52.97:424,53,0	1/1:5,5:10:11.97:98,12,0	1/1:7,17:24:38.95:320,39,0	1/1:5,8:13:17.97:148,18,0	1/1:3,10:13:20.91:172,21,0	1/1:5,19:25:47.93:394,48,0	1/1:6,6:12:23.90:190,24,0	1/1:2,8:11:25.99:203,26,0	1/1:7,6:12:20.68:168,21,0	1/1:6,2:8:8.97:74,9,0
chr10	62689648	.	AGAAG	A	1061.30	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=-2.057;DP=514;FS=4.859;HRun=0;HaplotypeScore=125.2747;InbreedingCoeff=0.8294;MQ=61.09;MQ0=2;MQRankSum=-1.573;QD=12.34;ReadPosRankSum=-3.157;VQSLOD=2.1534;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:17:14.87:0,15,291	1/1:4,0:4:5.96:46,6,0	0/0:13,0:11:18.03:0,18,189	0/1:9,0:7:12.12:12,0,50	0/0:37,0:37:41.73:0,42,319	0/0:16,0:16:44.96:0,45,424	0/0:9,0:7:17.93:0,18,147	1/1:17,0:16:41.94:365,42,0	0/0:16,0:16:47.55:0,48,430	0/0:28,0:28:77.79:0,78,779	0/0:26,0:26:32.75:0,33,251	0/0:15,0:15:39:0,39,395	0/0:15,0:15:44.83:0,45,361	0/0:18,0:18:53.69:0,54,425	0/0:21,0:21:59.96:0,60,593	0/0:17,0:17:41.94:0,42,412	1/1:6,29:35:15.13:237,15,0	1/1:19,2:21:32.02:558,32,0	0/0:19,0:17:41.98:0,42,393	0/0:22,0:22:50.86:0,51,439	0/0:14,0:14:32.88:0,33,271	0/0:8,0:8:21.02:0,21,329	0/0:18,0:18:45.07:0,45,660	0/0:25,0:25:26.54:0,27,804	0/0:18,0:18:38.93:0,39,373	0/0:26,0:26:69.07:0,69,701	0/0:23,0:23:62.76:0,63,531	0/0:6,0:6:18.02:0,18,229
chr10	62689652	.	GGAAGGAAA	G	671.45	PASS	AB=1.000;AC=8;AF=0.143;AN=56;BaseQRankSum=-2.576;DP=482;FS=9.732;HRun=0;HaplotypeScore=155.9256;InbreedingCoeff=0.3840;MQ=59.08;MQ0=2;MQRankSum=-0.435;QD=6.92;ReadPosRankSum=-2.945;VQSLOD=0.8564;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:16,0:15:9:9,0,319	1/1:0,4:4:5.96:91,6,0	0/0:12,0:10:18.03:0,18,189	0/1:7,0:5:12.12:12,0,51	0/0:35,0:35:41.73:0,42,319	0/0:15,0:15:44.96:0,45,465	0/0:8,0:6:17.93:0,18,147	1/1:17,0:16:41.94:365,42,0	0/0:16,0:16:45.34:0,45,404	0/0:26,0:26:78.03:0,78,896	0/0:23,0:23:32.75:0,33,251	0/0:14,0:14:39:0,39,445	0/0:15,0:15:44.38:0,44,410	0/0:18,0:18:53.74:0,54,445	0/0:21,0:21:59.70:0,60,681	0/0:15,0:15:41.37:0,41,450	0/1:35,0:35:24.29:24,0,43	0/1:18,0:18:32.96:309,0,33	0/0:17,0:15:41.99:0,42,443	0/0:20,0:20:50.86:0,51,460	0/0:13,0:13:32.88:0,33,272	0/0:8,0:8:24.03:0,24,561	0/0:17,0:17:48.08:0,48,1004	0/0:24,0:24:32.71:0,33,1465	0/0:14,0:14:38.94:0,39,430	0/0:25,0:25:68.82:0,69,789	0/0:23,0:23:62.09:0,62,572	0/0:6,0:6:18.02:0,18,264
chr10	62689684	.	A	AG	6984.29	PASS	AB=0.851;AC=33;AF=0.611;AN=54;BaseQRankSum=6.867;DP=473;FS=9.761;HRun=1;HaplotypeScore=112.2500;InbreedingCoeff=0.7241;MQ=47.36;MQ0=11;MQRankSum=-2.472;QD=22.97;ReadPosRankSum=-1.018;VQSLOD=3.6481;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:13,5:17:46.22:241,0,46	0/0:7,0:7:11.92:0,12,134	0/0:1,0:1:3:0,3,28	./.	1/1:26,0:26:26.81:261,27,0	1/1:11,4:15:38.82:412,39,0	1/1:8,3:9:13.48:262,13,0	0/0:32,0:23:63.11:0,63,734	0/0:21,0:21:26.61:0,27,294	1/1:14,8:22:10.27:490,10,0	1/1:17,0:17:14.72:124,15,0	1/1:10,5:15:38.77:407,39,0	1/1:8,9:17:44.84:532,45,0	1/1:14,5:19:50.69:495,51,0	1/1:9,11:20:53.97:661,54,0	1/1:10,7:17:44.92:503,45,0	0/0:37,0:36:41.60:0,42,584	0/0:17,0:17:28.08:0,28,476	1/1:6,4:9:26.50:269,27,0	1/1:17,5:22:50.30:606,50,0	0/1:10,0:9:38.44:72,0,38	0/0:16,0:16:45.15:0,45,583	0/0:10,0:10:30.10:0,30,389	0/0:26,0:26:72.18:0,72,912	1/1:13,3:16:18.36:275,18,0	1/1:11,9:20:41.17:629,41,0	1/1:11,8:19:47.86:584,48,0	0/1:7,3:10:12.30:160,0,12
chr10	62689739	.	AAAGAAAGG	A	14280.62	PASS	AB=0.846;AC=37;AF=0.661;AN=56;BaseQRankSum=11.978;DP=558;FS=13.162;HRun=0;HaplotypeScore=159.7367;InbreedingCoeff=0.9016;MQ=45.33;MQ0=6;MQRankSum=-9.241;QD=37.88;ReadPosRankSum=1.827;VQSLOD=3.8163;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:18,4:21:1.31:305,0,1	0/0:7,0:7:21.06:0,21,647	0/0:17,0:4:3.01:0,3,80	0/0:17,0:7:9.03:0,9,212	1/1:17,14:31:51.05:1111,51,0	1/1:5,17:22:48.10:1099,48,0	1/1:6,10:16:9.03:230,9,0	0/0:22,0:21:38.22:0,38,831	1/1:10,4:14:26.93:409,27,0	1/1:2,20:22:47.68:931,48,0	1/1:17,9:26:45.10:1046,45,0	1/1:4,19:23:39.09:868,39,0	1/1:4,14:18:27.09:693,27,0	1/1:4,19:23:45.05:941,45,0	1/1:4,9:13:24.03:497,24,0	1/1:8,6:14:33.10:675,33,0	0/0:37,0:37:84.13:0,84,2722	0/0:20,0:20:37.12:0,37,1487	1/1:7,9:15:30.05:575,30,0	1/1:15,12:26:54.04:1188,54,0	1/1:8,0:8:11.88:88,12,0	0/0:24,0:24:54.17:0,54,1783	0/0:15,0:15:36.12:0,36,1434	0/0:22,0:22:29.07:0,29,1201	1/1:9,8:17:36:690,36,0	1/1:3,22:25:63.10:1286,63,0	1/1:3,22:25:36.12:879,36,0	1/1:1,14:15:30.10:770,30,0
chr10	62691097	.	T	TA	6857.76	PASS	AB=0.599;AC=29;AF=0.518;AN=56;BaseQRankSum=-8.759;DP=566;FS=0.000;HRun=10;HaplotypeScore=60.5769;InbreedingCoeff=0.7696;MQ=72.50;MQ0=0;MQRankSum=-0.961;QD=21.30;ReadPosRankSum=1.067;VQSLOD=5.7142;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:26:58.93:0,59,474	0/0:14,0:14:29.88:0,30,237	0/0:16,0:17:29:0,29,228	0/0:10,0:10:17.29:0,17,130	0/0:36,0:37:85.91:0,86,696	1/1:4,17:21:26.49:487,26,0	1/1:1,8:9:24.06:256,24,0	0/0:29,0:31:84.81:0,85,674	0/0:9,0:9:26.94:0,27,217	1/1:6,14:20:42.10:445,42,0	1/1:6,24:30:38.41:578,38,0	1/1:6,14:20:42.07:436,42,0	1/1:5,8:13:27.03:276,27,0	1/1:4,17:21:49.01:514,49,0	0/1:6,21:27:10.76:512,0,11	1/1:4,14:18:11.45:327,11,0	0/0:24,0:24:61.87:0,62,488	0/0:22,0:22:52.94:0,53,424	1/1:4,7:12:6.14:213,6,0	0/1:7,22:29:32.47:491,0,32	0/1:4,4:8:37.26:52,0,37	0/0:15,0:15:32.91:0,33,271	0/0:26,0:27:61.89:0,62,498	0/0:11,0:11:26.95:0,27,222	1/1:5,17:22:23.48:455,23,0	1/1:0,23:23:69.12:711,69,0	1/1:6,30:36:34.91:754,35,0	1/1:1,12:13:33.08:352,33,0
chr10	62691998	.	A	AT	1372.38	PASS	AB=1.000;AC=10;AF=0.179;AN=56;BaseQRankSum=-1.165;DP=520;FS=4.043;HRun=10;HaplotypeScore=59.7096;InbreedingCoeff=0.7222;MQ=64.70;MQ0=3;MQRankSum=-3.688;QD=13.32;ReadPosRankSum=-1.606;VQSLOD=3.2481;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:69.15:0,69,605	0/1:4,0:4:6.62:55,0,7	0/1:17,0:12:11.79:12,0,42	0/0:19,0:8:16.20:0,16,122	0/0:25,0:25:62.89:0,63,513	0/0:18,0:18:50.93:0,51,418	0/0:16,0:15:2.28:0,2,216	1/1:6,20:25:38.55:595,39,0	1/1:16,0:16:9.15:88,9,0	0/0:19,1:21:14.97:0,15,318	0/0:21,0:22:58.95:0,59,470	0/0:7,0:7:11.97:0,12,98	0/0:11,0:11:23.95:0,24,197	0/0:16,0:17:37.96:0,38,301	0/0:22,0:22:53.65:0,54,430	0/0:13,0:13:29.94:0,30,246	1/1:2,25:27:52.01:546,52,0	1/1:2,9:11:23.96:240,24,0	0/0:26,0:26:53.21:0,53,442	0/0:17,0:17:44.82:0,45,357	0/0:14,0:14:29.96:0,30,246	0/0:9,0:9:23.97:0,24,197	0/0:16,0:16:36.67:0,37,286	0/0:30,0:30:74.88:0,75,613	0/0:22,0:22:54.81:0,55,445	0/0:27,1:27:33.90:0,34,485	0/0:25,0:25:68.89:0,69,563	0/0:10,0:10:25.81:0,26,185
chr10	62697939	.	TTGTGTG	T	3941.58	PASS	AB=0.838;AC=32;AF=0.640;AN=50;BaseQRankSum=2.555;DP=596;FS=6.455;HRun=0;HaplotypeScore=136.7342;InbreedingCoeff=0.6063;MQ=68.61;MQ0=6;MQRankSum=-5.610;QD=11.26;ReadPosRankSum=-1.141;VQSLOD=2.3425;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:27.09:0,27,756	1/1:3,4:7:9.03:183,9,0	./.	0/0:30,0:22:3.01:0,3,71	0/0:18,0:18:21.07:0,21,537	1/1:12,6:19:12.04:244,12,0	1/1:13,7:21:21.07:404,21,0	1/1:17,0:17:3:25,3,0	0/0:16,0:21:24.53:0,25,351	1/1:19,0:19:6.35:69,6,0	1/1:12,9:22:9.03:183,9,0	1/1:17,4:20:3.01:62,3,0	1/1:10,8:18:21.07:427,21,0	1/1:16,6:24:21.07:389,21,0	1/1:14,11:26:15.05:286,15,0	0/1:12,11:23:9.13:462,0,9	1/1:19,7:24:8.53:132,9,0	0/1:19,0:19:47.11:47,0,175	./.	1/1:14,10:24:16.41:308,16,0	0/0:22,7:29:0:0,0,0	0/0:23,0:27:9.03:0,9,222	0/0:13,0:16:6.02:0,6,184	0/0:18,0:26:8.99:0,9,177	1/1:7,4:12:9.03:164,9,0	1/1:18,5:24:14.51:209,15,0	1/1:18,9:28:18.06:347,18,0	./.
chr10	62699621	.	C	CA	718.07	PASS	AB=0.873;AC=7;AF=0.125;AN=56;BaseQRankSum=-3.631;DP=673;FS=3.857;HRun=14;HaplotypeScore=77.0508;InbreedingCoeff=0.1863;MQ=67.42;MQ0=4;MQRankSum=-0.501;QD=4.69;ReadPosRankSum=-0.877;VQSLOD=1.9401;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:12,28:41:18.05:424,18,0	0/0:13,0:15:13.27:0,13,160	0/1:24,0:11:1.56:2,0,43	0/0:26,0:12:8.30:0,8,49	0/1:13,21:35:18.73:341,0,19	0/0:23,1:26:33.46:0,33,319	0/0:24,2:26:6.84:0,7,290	0/0:38,1:43:40.05:0,40,374	0/0:11,0:11:19.27:0,19,111	0/0:21,1:24:22:0,22,254	0/0:13,1:18:18.17:0,18,222	0/1:18,0:20:3.05:3,0,175	0/0:20,1:21:42.33:0,42,259	0/0:18,0:18:29.74:0,30,177	0/0:23,0:25:55.78:0,56,342	0/0:26,1:30:38.80:0,39,356	0/0:31,0:31:55.37:0,55,395	0/0:17,0:17:25.57:0,26,159	0/0:19,0:22:25.55:0,26,163	0/0:29,1:32:23.93:0,24,259	0/0:14,1:17:8.16:0,8,172	0/1:17,3:20:17.32:17,0,156	0/0:14,1:17:7.39:0,7,158	0/0:17,0:20:43.56:0,44,254	0/0:22,2:24:14.36:0,14,206	0/0:22,2:26:27.01:0,27,291	0/0:26,1:29:23.45:0,23,327	0/1:9,1:11:27.38:55,0,27
chr10	62700622	.	A	AT	2582	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-11.020;DP=579;FS=5.241;HRun=5;HaplotypeScore=51.2542;InbreedingCoeff=0.9952;MQ=76.19;MQ0=0;MQRankSum=-1.403;QD=32.28;ReadPosRankSum=1.050;VQSLOD=4.2197;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,29:29:84.27:1105,84,0	0/0:6,0:6:18.05:0,18,193	0/0:15,0:15:33.06:0,33,342	0/0:10,0:10:27:0,27,260	1/1:4,34:38:96.24:1225,96,0	0/0:19,0:19:54.11:0,54,565	0/0:12,0:12:33.08:0,33,355	0/0:36,0:36:99:0,102,1090	1/1:1,12:13:30.10:395,30,0	0/0:22,0:22:60.15:0,60,645	0/0:27,0:27:75.17:0,75,797	0/0:19,0:19:57.14:0,57,612	0/0:22,0:22:66.17:0,66,709	0/0:16,0:16:45.11:0,45,483	0/0:20,0:20:57.14:0,57,613	0/0:21,0:21:51.12:0,51,541	0/0:14,0:14:42.11:0,42,451	0/0:10,0:10:24.03:0,24,247	0/0:19,0:19:51.10:0,51,534	0/0:41,0:41:99:0,117,1226	0/0:15,0:15:45.11:0,45,484	0/0:14,0:14:36.07:0,36,378	0/0:27,0:27:78.17:0,78,823	0/0:10,0:10:27.04:0,27,280	0/0:27,0:27:81.20:0,81,864	0/0:26,0:26:75.19:0,75,806	0/0:33,0:33:93.22:0,93,988	0/0:18,0:18:48.12:0,48,516
chr10	62701079	.	CG	C	2374.05	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=12.006;DP=728;FS=37.481;HRun=2;HaplotypeScore=79.4084;InbreedingCoeff=0.9991;MQ=78.28;MQ0=0;MQRankSum=-2.309;QD=24.47;ReadPosRankSum=0.266;VQSLOD=1.4385;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:19,29:48:96.49:1242,96,0	0/0:14,0:14:42.14:0,42,670	0/0:19,1:20:28.22:0,28,552	0/0:15,0:14:26.82:0,27,302	1/1:4,21:25:33.93:492,34,0	0/0:18,0:18:54.18:0,54,862	0/0:27,0:27:81.28:0,81,1285	0/0:22,0:22:66.22:0,66,1045	1/1:0,24:24:61.87:783,62,0	0/0:40,0:40:99:0,117,1832	0/0:28,0:28:81.26:0,81,1264	0/0:23,0:23:63.21:0,63,994	0/0:23,0:23:66.22:0,66,1047	0/0:33,0:33:95.91:0,96,1510	0/0:28,0:28:84.27:0,84,1308	0/0:21,0:21:63.21:0,63,1006	0/0:33,0:33:96.33:0,96,1518	0/0:20,0:20:60.20:0,60,951	0/0:18,0:18:51.17:0,51,810	0/0:24,0:24:72.25:0,72,1144	0/0:38,0:38:99:0,114,1736	0/0:28,0:28:75.24:0,75,1173	0/0:28,0:28:81.26:0,81,1270	0/0:35,0:35:99:0,105,1652	0/0:28,0:28:84.29:0,84,1337	0/0:25,0:25:75.26:0,75,1198	0/0:32,0:32:93.32:0,93,1476	0/0:10,0:10:30.10:0,30,463
chr10	62704213	.	C	CT	4136.85	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-11.203;DP=770;FS=5.009;HRun=1;HaplotypeScore=70.7499;InbreedingCoeff=0.9999;MQ=79.19;MQ0=0;MQRankSum=-1.225;QD=41.37;ReadPosRankSum=3.043;VQSLOD=4.3168;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,44:44:99:1754,117,0	0/0:13,0:13:39.13:0,39,506	0/0:18,0:18:48.16:0,48,623	0/0:19,0:19:54.18:0,54,699	1/1:0,26:26:75.25:1124,75,0	0/0:13,0:13:39.13:0,39,506	0/0:18,0:18:51.15:0,51,647	0/0:31,0:31:90.29:0,90,1167	1/1:0,30:30:84.28:1259,84,0	0/0:33,0:33:96.30:0,96,1230	0/0:17,0:17:48.16:0,48,622	0/0:24,0:24:72.22:0,72,920	0/0:31,0:31:90.29:0,90,1169	0/0:22,0:22:66.21:0,66,857	0/0:28,0:28:81.23:0,81,1021	0/0:29,0:29:87.26:0,87,1114	0/0:36,0:36:99:0,105,1363	0/0:42,0:42:99:0,117,1519	0/0:23,0:23:66.18:0,66,838	0/0:32,0:32:87.28:0,87,1129	0/0:46,0:46:99:0,138,1778	0/0:28,0:28:84.26:0,84,1077	0/0:20,0:20:57.16:0,57,712	0/0:28,0:28:81.26:0,81,1052	0/0:33,0:33:99:0,99,1285	0/0:37,0:37:99:0,105,1351	0/0:32,0:31:93.30:0,93,1206	0/0:17,0:17:51.17:0,51,662
chr10	62704966	.	A	AC	4165.37	PASS	AB=0.877;AC=43;AF=0.768;AN=56;BaseQRankSum=-1.193;DP=517;FS=18.640;HRun=2;HaplotypeScore=53.9397;InbreedingCoeff=0.6780;MQ=56.69;MQ0=43;MQRankSum=0.626;QD=10.74;ReadPosRankSum=-1.220;VQSLOD=0.0154;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:33,0:31:56.80:459,57,0	0/0:5,0:5:11.89:0,12,86	0/1:43,0:9:3.07:3,0,75	0/0:45,0:10:11.36:0,11,105	1/1:19,0:16:37.60:287,38,0	1/1:11,1:11:11.95:95,12,0	1/1:9,1:8:10.98:118,11,0	0/0:34,0:33:53.88:0,54,447	1/1:6,0:5:10.38:60,10,0	1/1:18,0:23:29.82:271,30,0	0/1:5,7:11:2.86:71,0,3	1/1:6,0:4:0.16:19,0,0	1/1:14,0:11:32.78:264,33,0	1/1:14,0:14:24.63:187,25,0	1/1:14,0:13:26.60:231,27,0	1/1:12,0:11:20.38:142,20,0	0/0:26,0:25:67.98:0,68,506	0/0:19,0:19:51.41:0,51,365	1/1:24,1:23:53.36:428,53,0	1/1:15,0:18:14.61:173,15,0	1/1:12,0:11:13.82:93,14,0	1/1:8,0:6:17.94:143,18,0	1/1:14,0:12:20.18:190,20,0	1/1:5,0:4:11.92:86,12,0	1/1:16,0:17:27.33:251,27,0	1/1:14,16:27:34.36:290,34,0	1/1:23,2:24:23.01:260,23,0	0/1:11,0:9:23.60:43,0,24
chr10	62705450	.	CT	C	2043.99	PASS	AB=0.917;AC=7;AF=0.125;AN=56;BaseQRankSum=9.181;DP=638;FS=3.152;HRun=9;HaplotypeScore=66.0870;InbreedingCoeff=0.8748;MQ=73.97;MQ0=3;MQRankSum=-2.292;QD=19.47;ReadPosRankSum=2.649;VQSLOD=4.3893;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,42:46:87.58:978,88,0	0/0:8,0:9:20.76:0,21,202	0/0:30,0:22:46.79:0,47,486	0/0:27,1:21:12.14:0,12,287	1/1:2,27:29:78.04:713,78,0	0/0:23,1:24:32.72:0,33,630	0/0:25,0:25:56.96:0,57,636	0/0:25,0:25:56.99:0,57,629	1/1:0,19:19:54.03:494,54,0	0/0:31,0:31:78.23:0,78,900	0/1:10,1:11:3:3,0,218	0/0:20,0:20:54.16:0,54,623	0/0:17,0:17:42.07:0,42,444	0/0:22,1:23:38.71:0,39,688	0/0:21,0:21:57.17:0,57,658	0/0:19,0:19:48.14:0,48,554	0/0:22,0:23:62.98:0,63,705	0/0:19,1:20:29.71:0,30,596	0/0:32,0:32:75.22:0,75,865	0/0:13,0:13:39.12:0,39,450	0/0:24,0:24:63.19:0,63,727	0/0:15,0:15:43.68:0,44,488	0/0:17,0:17:42.10:0,42,465	0/0:23,0:23:60.17:0,60,683	0/0:31,0:31:84.23:0,84,952	0/0:16,1:17:20.68:0,21,492	0/0:27,0:28:75:0,75,812	0/0:16,0:16:42.09:0,42,463
chr10	62705991	.	C	CCTGCCT	2119.50	PASS	AB=0.963;AC=5;AF=0.089;AN=56;BaseQRankSum=3.659;DP=600;FS=25.978;HRun=0;HaplotypeScore=140.7231;InbreedingCoeff=0.7967;MQ=66.35;MQ0=1;MQRankSum=-7.355;QD=22.08;ReadPosRankSum=-2.949;VQSLOD=0.8903;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:33,14:47:45.62:1224,46,0	0/0:10,0:10:21.06:0,21,407	0/1:25,0:23:6.54:7,0,654	0/0:19,0:19:23.86:0,24,324	1/1:10,12:22:33.58:1015,34,0	0/0:22,0:22:51.15:0,51,954	0/0:26,0:26:51.16:0,51,993	0/0:24,0:24:48.15:0,48,868	0/0:19,0:19:48.14:0,48,945	0/0:22,0:22:51.15:0,51,957	0/0:13,0:13:24.04:0,24,347	0/0:18,0:18:42.14:0,42,859	0/0:18,0:18:39.12:0,39,774	0/0:21,0:21:57.18:0,57,1161	0/0:28,0:28:72.25:0,72,1534	0/0:32,0:32:90.30:0,90,1844	0/0:28,0:28:63.22:0,63,1282	0/0:17,0:17:30.10:0,30,637	0/0:13,0:13:21.06:0,21,389	0/0:18,0:18:27.08:0,27,521	0/0:40,0:40:96.30:0,96,1859	0/0:14,0:14:33.08:0,33,590	0/0:13,0:13:24.05:0,24,413	0/0:22,0:22:51.18:0,51,1087	0/0:22,0:22:45.08:0,45,761	0/0:17,0:17:27.07:0,27,498	0/0:20,0:20:48.16:0,48,981	0/0:8,0:8:12.04:0,12,236
chr10	62710065	.	C	CTG	4268.67	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-11.556;DP=762;FS=3.286;HRun=0;HaplotypeScore=88.1176;InbreedingCoeff=0.9889;MQ=84.69;MQ0=0;MQRankSum=-2.513;QD=47.43;ReadPosRankSum=0.319;VQSLOD=6.0320;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,42:46:99:2134,114,0	0/0:13,0:13:39.13:0,39,573	0/0:27,0:26:69.22:0,69,965	0/0:19,0:19:52.40:0,52,708	1/1:0,16:17:42.14:787,42,0	0/0:23,0:23:69.23:0,69,1015	0/0:33,0:33:96.32:0,96,1406	0/0:27,0:27:69.22:0,69,999	1/1:0,26:27:72.25:1348,72,0	0/0:23,0:23:66.22:0,66,972	0/0:13,0:13:33.11:0,33,484	0/0:34,0:34:99:0,99,1395	0/0:37,0:37:99:0,105,1526	0/0:35,0:35:96.32:0,96,1413	0/0:31,0:31:93.30:0,93,1349	0/0:35,1:36:49.15:0,49,1426	0/0:31,0:31:87.29:0,87,1280	0/0:33,0:33:90.28:0,90,1301	0/0:24,0:24:60.20:0,60,881	0/0:17,0:17:51.16:0,51,732	0/0:77,0:77:99:0,229,3308	0/0:27,0:27:75.23:0,75,1082	0/0:14,0:14:39.11:0,39,553	0/0:32,0:32:87.29:0,87,1281	0/0:17,0:17:42.14:0,42,617	0/0:28,0:28:81.27:0,81,1178	0/0:17,0:17:51.16:0,51,731	0/0:4,0:4:12.04:0,12,177
chr10	62711823	.	GGCAAAA	G	1612.93	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=7.469;DP=729;FS=0.000;HRun=0;HaplotypeScore=154.6839;InbreedingCoeff=0.9959;MQ=65.53;MQ0=0;MQRankSum=-8.496;QD=28.80;ReadPosRankSum=-0.169;VQSLOD=3.4110;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,157,5449	0/0:10,0:10:30.10:0,30,1033	0/0:20,0:20:47.51:0,48,1390	0/0:17,0:17:48.15:0,48,1280	0/0:26,0:26:75.26:0,75,2566	0/0:23,0:23:69.22:0,69,2229	0/0:29,0:29:87.28:0,87,2994	0/0:30,0:30:87.26:0,87,2693	0/0:24,0:24:72.25:0,72,2495	0/0:31,0:31:93.32:0,93,3221	0/0:19,0:19:54.19:0,54,1891	0/0:18,0:18:54.19:0,54,1890	0/0:35,0:35:99:0,102,3432	0/0:31,0:31:87.30:0,87,2822	0/0:43,0:43:99:0,129,4480	0/0:38,0:38:99:0,111,3950	0/0:32,0:32:96.33:0,96,3322	0/0:13,0:13:36.12:0,36,1242	0/0:30,0:30:87.30:0,87,2960	0/0:18,0:18:48.16:0,48,1633	0/0:44,0:44:99:0,123,4113	1/1:2,18:20:33.11:779,33,0	1/1:0,11:11:24.08:566,24,0	1/1:2,23:25:17.99:410,18,0	0/0:17,0:17:51.18:0,51,1812	0/0:33,0:33:93.32:0,93,3264	0/0:29,0:29:87.30:0,87,2928	0/0:11,0:11:33.07:0,33,1090
chr10	62712972	.	GTGTT	G	1610.02	PASS	AB=0.926;AC=7;AF=0.125;AN=56;BaseQRankSum=9.221;DP=588;FS=7.677;HRun=0;HaplotypeScore=92.6625;InbreedingCoeff=0.7102;MQ=64.15;MQ0=9;MQRankSum=2.362;QD=20.38;ReadPosRankSum=3.671;VQSLOD=2.6368;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:9,26:32:39.28:906,39,0	0/0:9,0:9:9.03:0,9,215	0/0:52,0:25:26.93:0,27,457	0/0:44,0:23:20.88:0,21,512	1/1:1,14:15:42.10:654,42,0	0/0:25,0:25:51.17:0,51,1205	0/0:14,0:14:12.69:0,13,615	0/0:21,0:20:24.07:0,24,536	1/1:0,4:4:9.03:146,9,0	0/0:18,1:19:2.37:0,2,1081	0/0:8,0:8:18.06:0,18,415	0/0:19,0:19:51.18:0,51,1204	0/0:10,0:10:21.07:0,21,490	0/0:13,0:13:39.13:0,39,945	0/0:22,0:22:60.21:0,60,1426	0/0:13,0:13:30.09:0,30,620	0/0:33,2:34:32.45:0,32,1709	0/0:23,0:23:36.47:0,36,1058	0/0:23,0:22:36.10:0,36,769	0/0:24,0:24:57.18:0,57,1328	0/0:20,0:20:48.14:0,48,1101	0/0:12,0:12:24.08:0,24,537	0/0:25,1:26:5.33:0,5,1078	0/0:29,0:29:71.20:0,71,1533	0/0:13,0:13:36.10:0,36,780	0/0:20,0:20:39.13:0,39,944	0/1:23,2:25:46.40:46,0,887	0/0:15,0:15:18.06:0,18,430
chr10	62713843	.	G	GCACACACACA	9804.46	PASS	AB=1.000;AC=47;AF=0.839;AN=56;BaseQRankSum=-2.990;DP=689;FS=25.728;HRun=0;HaplotypeScore=226.0160;InbreedingCoeff=0.5240;MQ=59.04;MQ0=11;MQRankSum=-0.846;QD=17.76;ReadPosRankSum=-1.029;VQSLOD=2.6013;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:46:43.06:0,43,791	1/1:7,5:13:3.01:149,3,0	0/0:33,0:17:0.36:0,0,124	0/0:36,0:27:8.51:0,9,139	0/1:17,0:17:32.45:32,0,121	1/1:11,10:27:9.03:332,9,0	1/1:31,0:32:35.34:601,35,0	1/1:21,0:21:36.12:764,36,0	0/0:22,0:22:21.04:0,21,423	1/1:27,0:28:57.19:1208,57,0	1/1:13,0:13:3:29,3,0	1/1:16,1:17:11.41:253,11,0	1/1:12,8:23:16.30:596,16,0	1/1:17,0:17:16.29:457,16,0	1/1:16,17:34:6.15:222,6,0	1/1:7,10:20:15.01:651,15,0	1/1:16,13:37:23.50:789,23,0	1/1:8,0:21:15.55:435,16,0	1/1:23,0:22:23.25:320,23,0	1/1:8,7:18:2.96:148,3,0	1/1:37,0:37:16.25:278,16,0	1/1:15,0:17:20.58:468,21,0	1/1:8,0:16:3.01:72,3,0	1/1:29,0:37:22.86:351,23,0	1/1:10,9:19:3.01:148,3,0	1/1:24,0:25:43.69:920,44,0	1/1:12,16:30:11.58:446,12,0	1/1:4,0:4:3.01:138,3,0
chr10	62713870	.	CACACGT	C	5588.15	PASS	AB=1.000;AC=25;AF=0.446;AN=56;BaseQRankSum=-6.761;DP=715;FS=0.446;HRun=0;HaplotypeScore=196.6180;InbreedingCoeff=-0.3677;MQ=49.76;MQ0=10;MQRankSum=2.145;QD=10.27;ReadPosRankSum=-5.230;VQSLOD=2.5395;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:14,32:46:26.48:527,26,0	0/0:13,0:13:15.05:0,15,373	0/0:30,0:21:45.15:0,45,805	0/0:36,0:22:45.12:0,45,848	1/1:22,4:25:27.09:416,27,0	0/1:25,0:25:33.16:268,0,33	0/1:33,0:33:99:397,0,102	0/0:33,0:32:54.14:0,54,959	1/1:5,14:19:18.06:359,18,0	0/1:32,0:32:91.90:329,0,92	0/1:12,0:12:32.40:104,0,32	0/1:28,0:27:99:385,0,121	0/1:18,0:18:51.21:51,0,152	0/1:17,0:17:37:125,0,37	0/1:35,0:34:62.33:289,0,62	0/1:25,0:24:99:364,0,128	0/0:34,0:33:27.56:0,28,541	0/0:24,0:24:40.37:0,40,825	0/1:23,0:22:9.59:348,0,10	0/1:18,0:18:23.72:82,0,24	0/1:49,0:49:30.68:644,0,31	0/1:19,0:19:99:118,0,102	0/1:15,0:15:46.76:119,0,47	0/1:33,0:33:99:109,0,199	0/1:14,0:13:31.44:126,0,31	0/1:29,0:28:99:318,0,100	0/1:22,0:21:30.56:31,0,137	0/1:6,0:6:50.60:79,0,51
chr10	62713874	.	CGT	C	8321.70	PASS	AB=0.972;AC=44;AF=0.786;AN=56;BaseQRankSum=2.741;DP=669;FS=20.419;HRun=0;HaplotypeScore=154.1053;InbreedingCoeff=0.5045;MQ=53.45;MQ0=9;MQRankSum=-1.937;QD=14.70;ReadPosRankSum=2.356;VQSLOD=3.3541;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:42,0:42:79.17:91,0,79	0/0:13,0:13:21.07:0,21,331	0/0:28,0:21:53.58:0,54,1005	0/0:36,1:23:63.18:0,63,1132	1/1:25,1:25:1.94:373,2,0	1/1:26,0:26:23.77:455,24,0	1/1:30,1:31:56.06:685,56,0	0/1:28,4:31:99:117,0,749	0/1:16,0:16:25.30:96,0,25	1/1:33,0:33:87.56:985,88,0	1/1:11,0:11:12.02:161,12,0	1/1:26,1:26:46.64:586,47,0	1/1:14,0:14:16.77:119,17,0	1/1:17,1:18:21.47:270,21,0	1/1:31,0:30:28.74:381,29,0	1/1:24,0:23:40.63:490,41,0	0/1:30,0:29:7.04:7,0,393	0/0:25,0:25:16.24:0,16,439	1/1:19,0:18:42.87:562,43,0	1/1:16,0:16:8.70:102,9,0	1/1:45,0:45:72.14:962,72,0	1/1:13,2:15:25.84:307,26,0	1/1:13,1:14:2.06:129,2,0	1/1:31,2:33:36.97:368,37,0	1/1:12,1:13:11.53:146,12,0	1/1:23,2:25:59.48:711,59,0	1/1:19,0:19:13.24:89,13,0	1/1:6,0:6:11.85:129,12,0
chr10	62716996	.	A	AAC	162.49	PASS	AB=0.926;AC=9;AF=0.180;AN=50;BaseQRankSum=-0.612;DP=593;FS=3.259;HRun=0;HaplotypeScore=85.8087;InbreedingCoeff=0.1008;MQ=65.62;MQ0=19;MQRankSum=0.834;QD=1.03;ReadPosRankSum=-0.659;VQSLOD=1.2431;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:5.84:0,6,46	0/1:12,0:12:0:0,0,0	./.	./.	0/0:16,0:16:2.99:0,3,24	0/0:11,0:11:3.46:0,3,33	0/1:24,0:24:29.63:30,0,50	./.	0/0:13,0:18:11.73:0,12,57	1/1:30,0:29:3.47:29,3,0	0/0:12,0:12:3:0,3,32	0/0:15,0:14:6.01:0,6,63	0/0:17,0:17:17.67:0,18,172	0/0:14,0:14:2.57:0,3,14	0/0:31,0:31:17.09:0,17,147	0/0:14,0:14:5.97:0,6,51	0/1:14,12:30:49.83:194,0,50	0/1:30,0:30:9.24:9,0,126	0/0:11,0:12:2.84:0,3,14	1/1:13,0:13:1.25:3,1,0	0/0:49,0:46:5.75:0,6,44	0/0:11,0:13:5.68:0,6,28	0/1:17,0:17:0:0,0,0	0/0:34,0:37:25.89:0,26,155	0/0:10,0:10:3:0,3,32	0/0:19,0:19:0.97:0,1,28	0/0:12,0:13:11.10:0,11,103	0/0:6,0:7:2.84:0,3,14
chr10	62719345	.	GGTGTCT	G	59.74	PASS	AB=0.991;AC=4;AF=0.133;AN=30;BaseQRankSum=3.086;DP=1044;FS=0.000;HRun=0;HaplotypeScore=52.4249;InbreedingCoeff=0.2995;MQ=16.21;MQ0=571;MQRankSum=0.775;QD=0.50;ReadPosRankSum=0.296;VQSLOD=1.3337;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	./.	./.	./.	0/0:62,0:16:39.11:0,39,880	0/0:14,0:11:5.75:0,6,113	0/0:60,0:20:45.08:0,45,1010	./.	0/1:51,0:22:12.38:12,0,94	0/0:31,0:9:5.24:0,5,103	./.	0/0:52,1:23:2.16:0,2,65	0/0:39,0:12:5.95:0,6,119	0/0:37,0:29:36.12:0,36,1026	0/0:28,0:17:14.79:0,15,298	./.	0/0:23,0:8:0:0,0,0	./.	./.	./.	0/1:56,1:25:0:0,0,0	0/0:23,0:10:3:0,3,29	0/0:67,0:4:6.02:0,6,86	0/0:38,0:11:6.91:0,7,194	1/1:10,2:5:6.02:131,6,0
chr10	62719393	.	GTCT	G	454.03	PASS	AC=4;AF=0.091;AN=44;BaseQRankSum=2.033;DP=767;FS=2.901;HRun=0;HaplotypeScore=38.1619;InbreedingCoeff=0.4252;MQ=19.78;MQ0=386;MQRankSum=2.746;QD=12.61;ReadPosRankSum=2.668;VQSLOD=2.8950;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,11:14:24.08:444,24,0	0/0:7,0:5:3.01:0,3,74	0/0:33,0:1:3.01:0,3,74	0/0:63,0:4:6.02:0,6,105	1/1:8,3:7:6.02:112,6,0	./.	0/0:32,0:6:2.84:0,3,14	0/0:48,0:16:45.14:0,45,946	0/0:3,1:1:3.01:0,3,73	0/0:37,0:8:20.92:0,21,445	./.	0/0:39,2:12:6.02:0,6,147	0/0:19,0:6:7.45:0,7,88	0/0:34,0:12:0.10:0,0,0	0/0:25,2:7:3.01:0,3,74	0/0:20,0:6:3.38:0,3,74	0/0:42,0:36:72.20:0,72,1655	0/0:29,0:23:57.20:0,57,1367	./.	0/0:20,0:7:9.03:0,9,179	./.	0/0:15,0:5:3.01:0,3,32	./.	0/0:25,0:5:0:0,0,0	./.	0/0:44,0:9:24.08:0,24,508	0/0:20,0:6:0.89:0,1,2	0/0:10,0:3:6.02:0,6,97
chr10	62719411	.	T	TGTG	501.92	PASS	AB=0.965;AC=10;AF=0.227;AN=44;BaseQRankSum=-0.649;DP=722;FS=8.588;HRun=0;HaplotypeScore=46.7245;InbreedingCoeff=0.2467;MQ=21.53;MQ0=325;MQRankSum=-0.490;QD=2.35;ReadPosRankSum=-0.264;VQSLOD=-0.1732;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:25,1:13:8.81:9,0,324	0/0:7,0:5:3.01:0,3,50	0/0:42,0:1:3.01:0,3,50	0/0:66,0:5:12.04:0,12,191	0/0:21,0:8:6.02:0,6,100	./.	0/0:27,0:6:2.98:0,3,21	0/1:46,1:14:25.87:26,0,608	0/0:7,0:4:6.02:0,6,100	0/0:39,0:6:15.04:0,15,241	./.	0/0:24,1:10:10:0,10,127	0/0:19,0:7:11.92:0,12,113	0/0:36,1:17:6.57:0,7,88	0/1:30,0:10:0.32:0,0,0	0/0:18,0:7:6.44:0,6,46	0/0:49,0:42:93.29:0,93,1493	0/0:31,0:28:63.19:0,63,1021	0/0:23,0:1:3.01:0,3,50	1/1:22,4:9:9.03:204,9,0	1/1:43,2:6:3.01:68,3,0	./.	./.	./.	./.	0/1:30,3:8:99:183,0,179	0/0:17,0:8:2.98:0,3,22	1/1:5,2:2:6.02:135,6,0
chr10	62719425	.	TGTC	T	452.35	PASS	AB=0.839;AC=15;AF=0.341;AN=44;BaseQRankSum=6.341;DP=641;FS=38.089;HRun=0;HaplotypeScore=50.9762;InbreedingCoeff=0.4569;MQ=23.57;MQ0=227;MQRankSum=-4.547;QD=2.14;ReadPosRankSum=-1.867;VQSLOD=-0.3241;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:14:21.07:0,21,435	0/0:7,0:6:9.03:0,9,172	0/0:46,0:2:3.01:0,3,37	0/1:65,0:5:2.55:3,0,130	0/0:25,0:7:6.02:0,6,135	./.	1/1:17,2:5:1.25:3,1,0	0/0:44,0:18:45.15:0,45,837	0/0:7,0:5:3.01:0,3,68	0/0:37,0:5:11.88:0,12,258	./.	1/1:19,8:12:11.01:153,11,0	1/1:9,3:5:9.02:119,9,0	0/1:20,8:12:40.88:41,0,125	1/1:21,4:10:0.40:2,0,0	0/1:11,6:8:5.58:111,0,6	0/0:45,0:43:86.88:0,87,1760	0/0:32,0:30:57.20:0,57,1274	0/0:21,0:3:9.03:0,9,171	0/0:16,1:7:9.03:0,9,184	0/0:31,0:6:3.01:0,3,51	./.	./.	./.	./.	0/0:23,0:7:15.05:0,15,223	1/1:11,4:9:8.99:120,9,0	1/1:3,0:2:5.80:39,6,0
chr10	62719443	.	CTGA	C	576.60	PASS	AB=0.785;AC=7;AF=0.167;AN=42;BaseQRankSum=5.475;DP=698;FS=35.306;HRun=0;HaplotypeScore=72.0939;InbreedingCoeff=0.0690;MQ=41.80;MQ0=212;MQRankSum=-0.401;QD=3.56;ReadPosRankSum=1.816;VQSLOD=0.1801;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:11:17.99:0,18,310	0/0:12,0:11:24.08:0,24,569	0/0:47,0:9:12.02:0,12,193	0/0:79,0:18:1.40:0,1,110	0/0:15,0:2:3:0,3,25	0/0:8,1:3:3.01:0,3,71	0/1:22,6:8:0:0,0,0	0/0:47,0:26:78.27:0,78,1789	0/0:11,0:8:3.01:0,3,74	0/0:27,0:3:9.03:0,9,211	./.	1/1:29,11:23:11.27:222,11,0	0/1:15,7:13:18.37:138,0,18	0/1:23,8:14:46.70:47,0,138	0/0:30,5:15:2.24:0,2,45	0/1:19,8:14:47.62:181,0,48	0/0:36,0:34:57.20:0,57,1379	0/0:32,0:30:66.18:0,66,1512	0/0:18,2:7:21.07:0,21,465	0/0:18,1:9:2.97:0,3,20	./.	./.	./.	./.	./.	0/0:25,1:8:18.03:0,18,328	0/1:10,4:9:53.69:102,0,54	./.
chr10	62719467	.	CATCTGT	C	199.05	PASS	AB=0.975;AC=8;AF=0.222;AN=36;BaseQRankSum=5.172;DP=687;FS=7.148;HRun=0;HaplotypeScore=99.2268;InbreedingCoeff=-0.0098;MQ=48.58;MQ0=108;MQRankSum=0.751;QD=0.80;ReadPosRankSum=-1.162;VQSLOD=1.0393;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	0/0:13,0:12:26.15:0,26,889	0/0:49,0:13:27.10:0,27,270	0/1:82,0:23:3.33:3,0,82	./.	1/1:14,1:4:3.01:64,3,0	0/1:24,1:7:0:0,0,0	0/0:43,0:42:99:0,126,3607	0/0:11,0:8:1.86:0,2,51	0/0:14,0:2:3.01:0,3,83	./.	0/1:42,2:30:83.41:83,0,259	0/1:28,1:19:57.97:58,0,124	0/0:28,1:15:7.93:0,8,119	0/0:35,1:20:2.19:0,2,40	0/1:38,0:22:64.78:65,0,375	0/0:51,0:49:51.02:0,51,1212	0/0:33,0:28:45.12:0,45,1251	0/0:15,0:8:21.02:0,21,439	./.	./.	./.	./.	./.	./.	0/0:24,0:7:17.06:0,17,259	0/1:15,0:9:32.29:32,0,76	./.
chr10	62719678	.	GTCGTCT	G	620.85	PASS	AB=1.000;AC=9;AF=0.214;AN=42;BaseQRankSum=4.139;DP=1454;DS;FS=2.053;HRun=0;HaplotypeScore=194.2923;InbreedingCoeff=-0.0259;MQ=28.90;MQ0=470;MQRankSum=2.937;QD=1.03;ReadPosRankSum=-6.151;VQSLOD=0.8200;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	./.	0/0:6,0:3:0:0,0,0	./.	./.	./.	0/1:57,0:44:32.80:33,0,627	0/0:93,0:73:99:0,101,2416	0/0:24,0:3:9.03:0,9,302	./.	0/0:90,0:57:99:0,141,4118	0/0:24,0:17:9.03:0,9,211	0/1:83,0:58:67.26:67,0,862	0/1:68,0:52:24.66:25,0,1673	0/1:69,0:48:11.76:12,0,830	0/0:85,0:57:10.94:0,11,1075	0/1:92,0:74:36.64:37,0,2642	0/0:28,0:16:7.98:0,8,143	0/0:18,0:9:5.97:0,6,88	0/0:71,0:16:48.16:0,48,1372	0/0:59,0:31:39.13:0,39,936	0/1:171,0:102:89.83:90,0,3486	./.	./.	1/1:33,6:25:32.79:458,33,0	0/0:49,0:27:41.58:0,42,818	0/0:81,0:46:99:0,132,3619	0/0:52,0:39:1.64:0,2,1671	0/1:25,0:21:28.90:29,0,729
chr10	62719777	.	TGTG	T	212.85	PASS	AB=0.823;AC=6;AF=0.120;AN=50;BaseQRankSum=3.587;DP=611;FS=2.896;HRun=0;HaplotypeScore=66.1427;InbreedingCoeff=-0.1904;MQ=35.37;MQ0=147;MQRankSum=-2.447;QD=1.69;ReadPosRankSum=0.275;VQSLOD=1.5803;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:5:5.77:0,6,33	0/0:6,0:6:12.04:0,12,228	0/0:49,0:5:8.05:0,8,147	0/0:86,0:9:20.54:0,21,294	./.	0/0:11,0:7:4.93:0,5,54	0/0:17,1:8:9.03:0,9,171	0/0:45,0:29:78.20:0,78,1530	0/1:4,1:4:43.90:44,0,56	0/0:27,0:12:24.08:0,24,483	0/0:9,0:3:3:0,3,25	0/1:19,5:15:60.54:61,0,222	0/1:17,2:13:31.61:32,0,260	0/1:16,6:15:44.11:44,0,56	0/1:21,10:23:76.36:76,0,350	0/1:19,5:17:74.50:75,0,362	0/0:40,0:39:99:0,108,2336	0/0:16,0:16:44.74:0,45,943	0/0:15,0:2:6.02:0,6,114	./.	0/0:38,2:25:26.96:0,27,510	0/0:16,0:11:7.05:0,7,84	0/0:10,0:6:3:0,3,29	0/0:14,1:10:14.86:0,15,274	./.	0/0:23,0:16:29.93:0,30,577	0/0:13,0:9:16.08:0,16,172	0/0:3,0:1:2.88:0,3,15
chr10	62719797	.	CTGA	C	213.24	PASS	AB=0.907;AC=7;AF=0.130;AN=54;BaseQRankSum=4.576;DP=823;FS=0.000;HRun=0;HaplotypeScore=93.9722;InbreedingCoeff=0.0296;MQ=37.57;MQ0=217;MQRankSum=-1.485;QD=1.57;ReadPosRankSum=-1.921;VQSLOD=1.5097;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:16,2:13:10.35:0,10,269	0/0:4,0:3:2.98:0,3,21	0/0:48,0:5:9.81:0,10,211	0/0:72,0:8:19.48:0,19,434	./.	0/0:16,2:15:8.56:0,9,207	0/0:32,0:26:63.17:0,63,1404	0/0:47,0:28:78.25:0,78,1807	0/0:6,0:6:9.03:0,9,217	0/1:30,5:19:87.28:87,0,892	0/1:12,2:8:46.83:47,0,80	0/0:29,0:20:51.01:0,51,1046	0/0:30,0:23:54.12:0,54,1100	0/0:31,0:25:38.88:0,39,783	0/0:30,0:25:51.04:0,51,1187	0/0:32,0:26:51.17:0,51,1208	0/0:44,0:43:99:0,120,2847	0/0:19,0:19:54.18:0,54,1238	0/0:43,0:12:36.12:0,36,840	0/0:27,0:12:9.03:0,9,167	0/0:70,5:63:99:0,114,2551	0/1:19,1:13:43.93:44,0,98	0/1:23,1:12:49.76:50,0,58	0/0:36,3:29:50.60:0,51,1222	0/0:15,0:5:5.98:0,6,56	0/1:35,6:18:95.03:95,0,743	0/0:19,0:13:30.10:0,30,708	1/1:2,0:1:2.84:14,3,0
chr10	62720044	.	TGTG	T	2304.70	PASS	AB=0.917;AC=25;AF=0.543;AN=46;BaseQRankSum=-6.295;DP=851;FS=0.000;HRun=0;HaplotypeScore=255.2720;InbreedingCoeff=-0.4089;MQ=49.23;MQ0=74;MQRankSum=2.283;QD=3.34;ReadPosRankSum=0.600;VQSLOD=2.2526;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:12:1.36:36,1,0	1/1:2,0:2:2.97:20,3,0	0/0:46,0:12:7.20:0,7,177	0/0:72,0:22:12.76:0,13,395	./.	0/1:30,2:25:3.65:45,0,4	0/1:51,0:45:99:205,0,115	0/1:30,0:18:62.75:63,0,107	0/1:34,2:33:22.29:22,0,49	1/1:10,1:4:5.60:37,6,0	./.	0/1:58,3:56:40.18:149,0,40	0/1:39,1:38:90.09:209,0,90	0/1:44,4:45:25.11:234,0,25	0/1:55,1:51:33.71:34,0,34	0/1:40,2:38:23.08:183,0,23	0/1:6,10:16:28.56:329,0,29	0/1:10,10:20:99:421,0,131	0/0:19,0:6:11.89:0,12,75	./.	1/1:93,8:81:19.54:254,20,0	1/1:12,0:10:0.93:5,1,0	./.	0/1:56,0:49:33.04:107,0,33	./.	0/1:22,2:16:9.63:10,0,125	0/1:25,0:25:43.60:44,0,84	0/1:6,1:7:14.33:39,0,14
chr10	62720047	.	G	GTCT	8849.52	PASS	AB=0.934;AC=35;AF=0.761;AN=46;BaseQRankSum=-9.727;DP=783;FS=24.979;HRun=0;HaplotypeScore=260.9018;InbreedingCoeff=0.1254;MQ=50.83;MQ0=71;MQRankSum=1.239;QD=13.01;ReadPosRankSum=4.904;VQSLOD=2.9855;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:18,2:14:1.44:36,1,0	1/1:2,0:2:2.97:20,3,0	0/1:46,0:12:0.86:1,0,161	0/0:70,0:22:26.13:0,26,405	./.	0/1:22,5:21:15.37:110,0,15	0/1:39,10:43:62.44:700,0,62	0/1:31,0:17:30.44:30,0,179	1/1:16,17:30:32.82:777,33,0	1/1:9,1:2:6.01:101,6,0	./.	1/1:23,32:51:59.54:1315,60,0	1/1:18,20:36:16.50:1246,16,0	1/1:22,21:41:51.88:1129,52,0	1/1:26,29:50:26.04:739,26,0	1/1:29,11:36:13.03:626,13,0	0/1:15,0:15:54.70:77,0,55	0/1:22,1:23:99:213,0,153	0/0:13,3:6:11.89:0,12,75	./.	1/1:61,25:69:12.87:377,13,0	1/1:8,1:7:2.34:73,2,0	./.	1/1:30,20:44:19.24:449,19,0	./.	0/1:17,2:14:66.37:66,0,123	1/1:12,10:22:15.35:501,15,0	1/1:2,3:5:12.04:261,12,0
chr10	62720055	.	TGGTGTC	T	8942.42	PASS	AB=0.545;AC=41;AF=0.891;AN=46;BaseQRankSum=-4.416;DP=748;FS=10.541;HRun=0;HaplotypeScore=238.5919;InbreedingCoeff=0.6341;MQ=53.12;MQ0=58;MQRankSum=-1.697;QD=14.66;ReadPosRankSum=2.656;VQSLOD=2.7498;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:3,15:15:0:0,0,0	./.	0/0:44,0:16:12.23:0,12,239	0/0:71,0:26:14.50:0,15,472	./.	1/1:8,19:21:15.13:190,15,0	1/1:16,24:34:33.03:684,33,0	1/1:13,22:21:51.02:705,51,0	1/1:24,10:32:38.58:574,39,0	1/1:9,0:3:6.02:136,6,0	1/1:4,0:1:3.01:68,3,0	1/1:32,15:42:44.10:626,44,0	1/1:21,14:33:52.36:909,52,0	1/1:29,13:40:19.78:330,20,0	1/1:30,22:47:20.60:326,21,0	1/1:13,21:32:38.82:744,39,0	1/1:15,2:17:38.32:589,38,0	1/1:21,3:24:6.32:738,6,0	1/1:6,10:9:23.97:324,24,0	1/1:5,0:1:3.01:68,3,0	1/1:63,18:64:11.80:273,12,0	./.	./.	1/1:36,8:40:4.75:46,5,0	./.	1/1:5,15:16:45.10:825,45,0	1/1:13,8:21:28.44:700,28,0	1/1:4,0:4:5.99:89,6,0
chr10	62720061	.	C	CTGT	9848.24	PASS	AB=0.900;AC=43;AF=0.860;AN=50;BaseQRankSum=-2.845;DP=775;FS=0.000;HRun=0;HaplotypeScore=218.4074;InbreedingCoeff=0.6286;MQ=56.18;MQ0=49;MQRankSum=-1.383;QD=15.81;ReadPosRankSum=-1.459;VQSLOD=3.8223;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:18,1:15:1.83:4,2,0	./.	0/0:48,0:20:29.80:0,30,384	0/0:75,0:36:9.22:0,9,544	./.	1/1:21,4:18:11.92:171,12,0	1/1:37,6:37:48.96:824,49,0	1/1:28,1:19:42.79:672,43,0	1/1:19,12:28:42.94:771,43,0	1/1:11,3:9:15.02:241,15,0	1/1:2,3:1:3.01:73,3,0	1/1:31,13:39:50.18:647,50,0	1/1:25,13:36:62.89:1072,63,0	1/1:28,6:33:24.69:390,25,0	1/1:33,15:45:27.36:321,27,0	1/1:26,4:28:39.20:646,39,0	1/1:12,9:21:47.64:924,48,0	1/1:14,7:23:2.15:664,2,0	1/1:13,2:9:13.25:303,13,0	1/1:8,2:6:3.01:73,3,0	1/1:69,20:70:26.80:502,27,0	./.	0/1:8,1:6:0:0,0,0	1/1:40,10:44:17.12:119,17,0	0/0:4,1:3:0.47:0,0,1	1/1:21,0:17:15.60:628,16,0	1/1:16,6:22:43.04:708,43,0	1/1:1,1:2:5.99:95,6,0
chr10	62738003	.	A	AGT	5638.26	PASS	AB=0.997;AC=42;AF=0.750;AN=56;BaseQRankSum=7.708;DP=522;FS=26.364;HRun=0;HaplotypeScore=191.9062;InbreedingCoeff=0.6243;MQ=49.86;MQ0=66;MQRankSum=-4.614;QD=15.12;ReadPosRankSum=-0.147;VQSLOD=3.0831;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:32,0:28:78.18:871,78,0	0/0:6,0:6:17.95:0,18,216	0/0:71,0:16:28.87:0,29,326	0/1:91,0:25:5.48:5,0,335	1/1:14,0:14:24.05:257,24,0	1/1:8,0:7:17.97:198,18,0	1/1:15,0:14:10.31:279,10,0	0/0:26,0:21:55.83:0,56,654	0/1:7,0:5:0.58:90,0,1	1/1:16,0:13:36.07:431,36,0	1/1:7,0:7:8.93:96,9,0	1/1:5,0:5:12.04:154,12,0	1/1:8,0:8:5.97:197,6,0	1/1:11,0:9:27.07:300,27,0	0/1:13,0:13:15.24:187,0,15	1/1:16,0:14:23.43:371,23,0	0/0:21,0:18:39.84:0,40,498	0/0:25,0:19:27.95:0,28,321	1/1:9,0:3:9.03:108,9,0	1/1:14,0:13:29.97:328,30,0	1/1:18,0:14:27.04:318,27,0	1/1:13,2:14:20.96:228,21,0	1/1:7,1:7:15:160,15,0	1/1:12,0:9:8.64:146,9,0	1/1:13,0:11:23.78:257,24,0	1/1:11,0:11:33.09:400,33,0	1/1:12,0:7:20.99:227,21,0	0/1:16,0:3:13.02:29,0,13
chr10	62740106	.	TGC	T	361.36	PASS	AB=0.950;AC=12;AF=0.222;AN=54;BaseQRankSum=-0.735;DP=345;FS=0.000;HRun=0;HaplotypeScore=59.1605;InbreedingCoeff=0.3093;MQ=64.43;MQ0=0;MQRankSum=0.378;QD=4.25;ReadPosRankSum=0.772;VQSLOD=1.6058;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:5.11:0,5,77	0/0:3,0:3:3.01:0,3,48	1/1:7,0:6:0.47:1,0,0	0/0:11,0:9:2.33:0,2,32	0/1:8,0:8:0:0,0,0	0/0:8,0:8:18.03:0,18,191	0/0:20,1:21:3.09:0,3,437	0/0:12,0:11:15.05:0,15,204	0/1:13,0:13:17.14:17,0,39	0/0:12,0:12:12:0,12,132	0/0:6,0:6:5.98:0,6,62	0/0:6,0:6:2.90:0,3,16	0/0:9,0:9:2.27:0,2,46	0/0:12,0:12:9.90:0,10,188	0/1:5,1:6:28.72:29,0,31	0/0:5,0:5:3.01:0,3,37	0/0:30,0:30:35.09:0,35,327	0/0:16,0:16:20.34:0,20,191	0/0:14,0:14:4.78:0,5,174	./.	0/0:40,0:40:56.17:0,56,692	1/1:5,6:11:12.04:143,12,0	1/1:3,1:4:3.01:36,3,0	1/1:9,9:18:21.06:250,21,0	0/0:11,0:11:18.05:0,18,240	0/1:16,1:17:20.74:21,0,116	0/0:10,0:10:14.25:0,14,163	0/0:4,0:4:0:0,0,0
chr10	62740125	.	G	GCGCA	1190.60	PASS	AB=0.962;AC=10;AF=0.179;AN=56;BaseQRankSum=-5.425;DP=276;FS=1.754;HRun=0;HaplotypeScore=63.0926;InbreedingCoeff=0.4500;MQ=65.75;MQ0=8;MQRankSum=-2.165;QD=12.80;ReadPosRankSum=-1.165;VQSLOD=2.4127;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:23:27.16:27,0,37	1/1:3,0:3:3:25,3,0	0/0:10,0:2:2.98:0,3,22	0/0:14,0:7:1.82:0,2,9	0/0:5,0:5:0:0,0,0	0/0:10,0:10:26.98:0,27,270	0/0:18,0:18:36.01:0,36,361	1/1:17,0:15:29.58:233,30,0	0/1:11,0:11:20.64:26,0,21	0/0:6,0:6:8.69:0,9,78	0/0:5,0:5:3.01:0,3,33	0/0:4,0:4:8.95:0,9,73	0/0:5,0:5:8.90:0,9,82	0/0:10,0:10:17.98:0,18,173	0/0:3,0:3:5.95:0,6,52	0/0:1,0:1:3.01:0,3,33	1/1:3,20:23:32.78:780,33,0	1/1:4,11:15:11.73:249,12,0	0/0:14,0:14:26.05:0,26,197	0/0:3,0:3:2.99:0,3,23	0/0:30,0:30:41.83:0,42,414	0/0:10,0:10:18.01:0,18,186	0/0:1,0:1:3.01:0,3,35	0/0:9,0:9:21.01:0,21,210	0/0:9,0:9:20.92:0,21,177	0/0:6,0:6:15.04:0,15,163	0/0:7,0:7:9.01:0,9,91	0/0:3,0:3:5.92:0,6,40
chr10	62740127	.	G	GCACACACACA	254.78	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-0.162;DP=276;FS=1.385;HRun=0;HaplotypeScore=94.5314;InbreedingCoeff=0.4840;MQ=65.61;MQ0=8;MQRankSum=-0.409;QD=5.93;ReadPosRankSum=-2.886;VQSLOD=1.2307;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,11:23:3.25:149,3,0	0/0:3,0:3:3:0,3,25	0/0:10,0:2:3.01:0,3,45	0/0:13,0:7:2.67:0,3,14	1/1:4,2:7:2.99:24,3,0	0/0:10,0:10:27.09:0,27,745	0/0:17,0:17:45.01:0,45,926	0/0:19,0:17:28.85:0,29,426	1/1:11,0:12:11.83:195,12,0	0/0:6,0:6:12.03:0,12,249	0/0:5,0:5:3.01:0,3,93	0/0:3,0:3:9.03:0,9,256	0/0:5,0:5:14.93:0,15,222	0/0:9,0:9:18.06:0,18,504	0/0:3,0:3:8.21:0,8,123	0/0:1,0:1:3.01:0,3,94	0/0:22,0:22:19.20:0,19,162	0/0:14,0:14:13.33:0,13,76	0/0:16,0:16:17.67:0,18,628	0/0:2,0:2:3.01:0,3,93	0/0:30,0:30:47.62:0,48,1112	0/0:9,0:9:21.04:0,21,535	0/0:1,0:1:3.01:0,3,80	0/0:9,0:9:20.75:0,21,376	0/0:9,0:9:20.11:0,20,490	0/0:5,0:5:15.05:0,15,413	0/0:8,0:8:14.97:0,15,259	0/0:4,0:4:11.93:0,12,213
chr10	62740131	.	GCA	G	2733.45	PASS	AC=32;AF=0.593;AN=54;BaseQRankSum=-5.194;DP=257;FS=2.350;HRun=0;HaplotypeScore=41.1524;InbreedingCoeff=0.7242;MQ=64.12;MQ0=8;MQRankSum=1.467;QD=22.41;ReadPosRankSum=0.539;VQSLOD=3.7342;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:4.83:0,5,31	./.	0/0:11,0:2:6.02:0,6,78	0/0:13,0:6:2.48:0,2,9	0/0:8,0:8:3:0,3,25	1/1:1,9:10:24.08:300,24,0	1/1:5,12:17:27.09:337,27,0	0/0:16,0:14:30.06:0,30,465	0/0:12,0:11:3:0,3,26	1/1:1,5:6:15:167,15,0	1/1:1,3:4:3.01:38,3,0	1/1:1,2:3:9.03:113,9,0	1/1:1,4:5:12.04:149,12,0	1/1:0,7:7:18.06:225,18,0	1/1:1,2:3:6.02:67,6,0	1/1:0,1:1:3.01:38,3,0	0/0:21,0:21:38.05:0,38,391	0/0:15,0:15:15.47:0,15,160	1/1:4,12:16:36.11:441,36,0	1/1:2,0:2:3.01:38,3,0	1/1:5,20:25:33.10:412,33,0	0/0:9,0:9:23.89:0,24,288	0/0:1,0:1:3.01:0,3,39	0/0:8,0:8:12.04:0,12,148	1/1:2,5:7:15.05:187,15,0	1/1:0,5:5:15.05:187,15,0	1/1:3,4:7:9.03:112,9,0	1/1:1,3:4:9.03:112,9,0
chr10	62743809	.	G	GA	2283.14	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-7.231;DP=523;FS=0.490;HRun=7;HaplotypeScore=55.8924;InbreedingCoeff=0.9914;MQ=83.19;MQ0=0;MQRankSum=-2.520;QD=28.54;ReadPosRankSum=1.875;VQSLOD=4.2910;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,30:33:81.25:978,81,0	0/0:12,0:12:36.06:0,36,347	0/0:20,0:20:42:0,42,390	0/0:11,0:11:30.04:0,30,288	1/1:3,27:30:78.24:940,78,0	0/0:24,0:24:72.09:0,72,684	0/0:17,0:17:39.06:0,39,377	0/0:21,0:21:39.04:0,39,372	1/1:3,14:17:42.13:507,42,0	0/0:15,0:15:33.05:0,33,319	0/0:27,0:27:72.11:0,72,695	0/0:11,0:11:33.05:0,33,319	0/0:13,0:13:33.03:0,33,313	0/0:8,0:8:18.03:0,18,174	0/0:15,0:15:39.06:0,39,377	0/0:17,0:17:45.06:0,45,429	0/0:26,0:26:72.11:0,72,695	0/0:15,0:15:41.43:0,41,385	0/0:30,0:30:75.07:0,75,712	0/0:29,0:29:66.05:0,66,623	0/0:9,0:9:24.04:0,24,232	0/0:9,0:9:21.03:0,21,203	0/0:18,0:18:48.08:0,48,464	0/0:10,0:10:18.02:0,18,174	0/0:22,0:22:57.09:0,57,550	0/0:18,0:18:48.08:0,48,464	0/0:21,0:21:60.07:0,60,567	0/0:25,0:25:75.12:0,75,724
chr10	62745106	.	AG	A	219.57	PASS	AC=20;AF=0.435;AN=46;BaseQRankSum=1.262;DP=157;FS=12.520;HRun=9;HaplotypeScore=26.4168;InbreedingCoeff=0.4796;MQ=87.53;MQ0=18;MQRankSum=-0.653;QD=5.78;ReadPosRankSum=0.392;VQSLOD=-0.2217;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:21:39.97:0,40,435	0/0:6,0:5:2.50:0,2,9	0/0:14,0:13:24.05:0,24,262	0/0:8,0:5:6.01:0,6,61	0/0:5,0:4:6.02:0,6,65	1/1:1,0:1:2.80:13,3,0	1/1:3,6:7:12.89:110,13,0	0/0:4,0:5:2.60:0,3,10	0/0:7,0:7:12.04:0,12,138	1/1:1,1:2:3:27,3,0	1/1:4,0:2:2.78:23,3,0	0/0:4,0:2:2.84:0,3,14	1/1:0,1:1:3:27,3,0	./.	1/1:8,1:6:0.81:24,1,0	0/0:4,0:3:0:0,0,0	0/0:13,0:16:17.61:0,18,120	0/0:4,0:3:2.84:0,3,14	0/0:3,0:2:2.99:0,3,24	1/1:2,2:3:1.29:24,1,0	0/0:9,2:7:0:0,0,0	./.	1/1:1,2:3:3:27,3,0	1/1:4,0:4:6:55,6,0	./.	1/1:0,1:1:3:27,3,0	./.	./.
chr10	62745509	.	G	GCACA	1787.32	PASS	AB=0.856;AC=32;AF=0.640;AN=50;BaseQRankSum=-1.089;DP=518;FS=8.324;HRun=0;HaplotypeScore=109.1786;InbreedingCoeff=0.4688;MQ=59.12;MQ0=5;MQRankSum=-0.016;QD=6.14;ReadPosRankSum=-1.010;VQSLOD=1.5546;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:30:27.04:0,27,304	0/1:8,0:9:13.81:14,0,109	./.	./.	0/1:9,0:15:22.36:22,0,88	0/1:10,0:17:6.64:7,0,7	1/1:20,1:24:9.05:133,9,0	./.	0/0:12,0:18:15.02:0,15,139	0/1:17,5:23:4.77:297,0,5	1/1:10,0:10:5.89:75,6,0	1/1:14,0:14:6.02:101,6,0	1/1:17,0:17:9:94,9,0	1/1:11,3:16:9.03:193,9,0	1/1:19,8:25:3.01:71,3,0	1/1:12,8:21:5.56:141,6,0	0/0:24,0:24:27.01:0,27,329	0/0:26,0:26:26.55:0,27,327	1/1:9,0:9:6:67,6,0	1/1:8,0:12:6.02:104,6,0	1/1:29,0:29:18.58:318,19,0	0/0:21,0:23:24.04:0,24,307	0/0:10,0:10:7.37:0,7,95	0/0:24,0:28:14.69:0,15,323	1/1:16,0:16:3.01:50,3,0	1/1:13,0:13:5.98:88,6,0	1/1:13,0:13:6.02:126,6,0	1/1:5,0:5:3.01:61,3,0
chr10	62745515	.	A	ACACACA	1884.95	PASS	AB=1.000;AC=32;AF=0.640;AN=50;BaseQRankSum=-1.267;DP=571;FS=6.883;HRun=0;HaplotypeScore=135.5339;InbreedingCoeff=0.4134;MQ=55.22;MQ0=9;MQRankSum=-0.490;QD=6.10;ReadPosRankSum=-1.082;VQSLOD=1.9584;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:26.95:0,27,412	0/1:7,0:7:13.72:14,0,151	./.	./.	0/1:20,0:20:12:12,0,133	0/0:17,0:16:0.47:0,0,1	1/1:25,0:25:5.60:132,6,0	./.	0/0:16,0:16:15.05:0,15,209	0/1:24,0:24:6.92:235,0,7	1/1:11,0:10:5.89:75,6,0	1/1:9,8:18:3.01:96,3,0	1/1:18,0:17:9:138,9,0	1/1:15,0:15:9.03:173,9,0	1/1:29,0:27:6.86:60,7,0	1/1:22,0:22:5.98:77,6,0	0/0:29,0:29:27.04:0,27,411	0/0:30,0:29:15.28:0,15,354	1/1:8,0:8:3.01:44,3,0	1/1:12,0:12:6.02:192,6,0	1/1:31,0:31:18.53:423,19,0	0/0:27,0:27:24.04:0,24,369	0/1:12,0:12:12.02:12,0,112	0/0:35,0:35:24.96:0,25,445	1/1:18,0:18:2.52:93,3,0	1/1:14,0:14:6.86:90,7,0	1/1:15,0:15:6.02:150,6,0	1/1:10,0:8:3.01:39,3,0
chr10	62746113	.	ACG	A	3726.04	PASS	AB=1.000;AC=40;AF=0.714;AN=56;BaseQRankSum=-2.525;DP=566;FS=4.700;HRun=0;HaplotypeScore=85.6032;InbreedingCoeff=0.5165;MQ=64.76;MQ0=21;MQRankSum=0.142;QD=8.94;ReadPosRankSum=3.276;VQSLOD=3.1841;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:44,0:42:49.88:596,50,0	0/0:5,0:5:5.19:0,5,26	0/0:35,0:10:18.99:0,19,172	0/0:36,0:22:48.11:0,48,334	1/1:3,20:22:3.01:43,3,0	1/1:20,0:20:13.68:120,14,0	1/1:16,0:15:11.65:165,12,0	0/0:20,0:20:40.81:0,41,274	1/1:1,23:24:3.01:43,3,0	0/1:24,0:22:6.35:272,0,6	1/1:13,0:12:17.86:148,18,0	1/1:14,0:13:0.30:36,0,0	1/1:9,0:10:4.59:106,5,0	1/1:21,0:19:2.19:52,2,0	1/1:18,0:18:28.90:244,29,0	0/1:9,0:9:7.48:7,0,9	0/0:35,0:35:59.48:0,59,493	0/0:18,0:18:21.22:0,21,239	1/1:19,0:18:35.08:277,35,0	1/1:13,0:12:15.95:201,16,0	1/1:32,0:29:7.56:170,8,0	1/1:10,0:10:29.91:239,30,0	1/1:4,11:14:3.01:43,3,0	1/1:1,38:39:24.08:342,24,0	0/1:7,0:7:0.32:64,0,0	1/1:21,0:20:2.68:279,3,0	1/1:17,0:17:9.08:187,9,0	0/1:7,0:7:1.82:93,0,2
chr10	62746115	.	G	GCACA	1476.67	PASS	AB=0.812;AC=31;AF=0.554;AN=56;BaseQRankSum=2.162;DP=557;FS=16.776;HRun=0;HaplotypeScore=107.5876;InbreedingCoeff=0.2570;MQ=61.77;MQ0=22;MQRankSum=-1.689;QD=4.05;ReadPosRankSum=-3.190;VQSLOD=0.1567;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:42,0:40:9.55:71,0,10	0/1:1,0:4:18.70:19,0,39	0/0:34,0:9:27.06:0,27,414	0/0:33,0:19:55.32:0,55,746	0/0:22,0:21:2.95:0,3,23	1/1:9,0:20:2.72:25,3,0	0/1:15,1:15:2.73:45,0,3	0/0:20,0:20:42.09:0,42,625	0/0:25,0:25:2.99:0,3,23	1/1:24,0:22:7.35:121,7,0	1/1:13,0:12:3.68:25,4,0	0/1:5,0:14:0.74:47,0,1	1/1:10,0:10:15.29:147,15,0	0/1:9,0:20:6.60:45,0,7	1/1:18,0:18:14.27:181,14,0	0/1:2,2:9:34.01:46,0,34	0/1:34,0:34:14.15:14,0,539	0/1:18,0:18:9.19:9,0,315	1/1:17,0:16:22.07:193,22,0	1/1:14,0:13:5.80:72,6,0	1/1:15,17:29:6.61:91,7,0	0/1:10,0:10:0.08:19,0,0	0/0:12,0:11:2.99:0,3,23	0/0:38,0:38:23.91:0,24,187	1/1:7,0:7:4.87:73,5,0	1/1:23,0:21:24.30:232,24,0	1/1:17,0:16:16.72:173,17,0	0/0:8,0:8:1.89:0,2,5
chr10	62746117	.	G	GCACA	1872.64	PASS	AB=0.870;AC=40;AF=0.769;AN=52;BaseQRankSum=-2.030;DP=582;FS=3.894;HRun=0;HaplotypeScore=112.8853;InbreedingCoeff=0.3296;MQ=60.46;MQ0=25;MQRankSum=-0.822;QD=4.79;ReadPosRankSum=-1.234;VQSLOD=1.7222;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:49,0:47:22.02:60,0,22	1/1:4,0:4:3:68,3,0	./.	./.	0/0:24,0:22:3.01:0,3,31	1/1:20,0:20:0.89:2,1,0	1/1:18,0:17:2.99:33,3,0	0/0:20,0:20:2.20:0,2,8	0/0:26,0:26:3:0,3,30	1/1:27,0:25:16.46:137,16,0	1/1:13,0:12:2.96:23,3,0	1/1:13,0:12:3.01:52,3,0	1/1:11,0:11:14.40:168,14,0	1/1:22,0:20:5.97:72,6,0	1/1:17,0:17:9.03:148,9,0	1/1:10,0:10:5.99:75,6,0	1/1:16,3:39:18.32:306,18,0	0/1:12,7:19:18.40:149,0,18	1/1:15,0:14:6.02:84,6,0	1/1:14,0:13:3.01:47,3,0	1/1:34,0:30:3.90:71,4,0	1/1:10,0:10:3:29,3,0	0/0:14,0:13:3:0,3,30	0/0:40,0:40:27.02:0,27,264	1/1:7,0:7:6.01:75,6,0	1/1:23,0:21:19.83:237,20,0	1/1:16,0:15:14.54:175,15,0	1/1:9,0:8:0:0,0,0
chr10	62746344	.	GAA	G	4724.61	PASS	AB=0.707;AC=40;AF=0.714;AN=56;BaseQRankSum=-2.581;DP=487;FS=4.535;HRun=14;HaplotypeScore=74.3662;InbreedingCoeff=0.6066;MQ=56.57;MQ0=20;MQRankSum=0.474;QD=13.38;ReadPosRankSum=3.924;VQSLOD=4.0387;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:8,2:29:0.47:0,0,178	0/1:9,0:9:2.28:2,0,177	0/0:7,0:3:8.51:0,9,72	0/0:5,0:5:11.18:0,11,101	0/1:14,1:23:17.92:18,0,143	0/1:4,12:17:0.44:94,0,0	1/1:3,9:11:20.99:194,21,0	0/0:32,0:30:64.44:0,64,734	1/1:3,7:11:11.51:142,12,0	1/1:4,19:21:37.51:479,38,0	1/1:4,19:24:5.26:404,5,0	1/1:0,10:10:15:139,15,0	1/1:0,3:5:2.82:74,3,0	1/1:3,6:9:9.39:139,9,0	1/1:5,8:13:18.05:187,18,0	1/1:3,16:17:23.86:222,24,0	0/0:35,0:32:72.08:0,72,894	0/0:23,0:23:56.43:0,56,672	0/1:6,18:24:0.66:386,0,1	1/1:3,12:14:35.71:305,36,0	1/1:4,5:9:6.14:137,6,0	1/1:1,8:8:14.99:139,15,0	1/1:4,18:23:38.54:334,39,0	1/1:2,9:13:12.34:158,12,0	1/1:3,13:16:20.86:241,21,0	1/1:4,22:26:68.01:600,68,0	1/1:4,14:18:17.92:166,18,0	1/1:6,9:12:14.61:165,15,0
chr10	62746446	.	AACACAC	A	43.82	PASS	AB=0.700;AC=5;AF=0.104;AN=48;BaseQRankSum=4.187;DP=423;FS=0.000;HRun=0;HaplotypeScore=90.4304;InbreedingCoeff=0.4545;MQ=53.47;MQ0=16;MQRankSum=0.332;QD=1.15;ReadPosRankSum=1.309;VQSLOD=1.3826;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:17,4:21:6.02:123,6,0	./.	./.	0/0:15,0:7:4.37:0,4,68	./.	0/0:17,0:17:17.25:0,17,503	0/0:7,0:8:9.03:0,9,148	0/0:37,0:36:26.98:0,27,560	0/0:5,0:6:9.03:0,9,120	0/0:22,0:20:21.07:0,21,618	0/0:6,0:6:9.03:0,9,260	0/0:12,0:10:18.04:0,18,454	0/0:10,0:10:6.02:0,6,195	0/0:7,0:7:15.05:0,15,436	0/0:10,0:10:21.07:0,21,609	0/0:22,0:22:36.11:0,36,973	0/0:33,0:36:63.69:0,64,1885	0/0:25,0:25:45.13:0,45,1325	0/0:13,0:14:14.63:0,15,173	0/0:9,0:9:12.51:0,13,374	0/0:23,0:23:45.15:0,45,1315	1/1:2,0:2:0.89:2,1,0	./.	0/1:8,0:13:0.43:0,0,14	0/0:18,0:18:33.11:0,33,901	0/0:20,0:20:30.07:0,30,795	0/0:15,0:15:18.06:0,18,533	0/0:7,0:7:3.01:0,3,88
chr10	62746664	.	AACAC	A	1566.99	PASS	AB=0.846;AC=33;AF=0.786;AN=42;BaseQRankSum=-0.229;DP=313;FS=5.835;HRun=0;HaplotypeScore=61.5373;InbreedingCoeff=0.1973;MQ=58.88;MQ0=12;MQRankSum=0.406;QD=7.25;ReadPosRankSum=0.701;VQSLOD=1.2561;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	0/0:9,0:8:6.02:0,6,118	0/1:15,5:19:8.05:171,0,8	1/1:14,4:19:15.05:220,15,0	0/0:12,0:12:3.90:0,4,40	1/1:6,0:9:6:56,6,0	1/1:5,1:6:6.02:80,6,0	0/1:4,0:3:0.02:0,0,0	1/1:8,1:9:3:47,3,0	0/1:6,1:7:0:0,0,0	1/1:7,0:7:2.71:45,3,0	1/1:4,3:7:15.04:213,15,0	1/1:10,3:13:8.62:139,9,0	0/1:22,1:30:16.53:17,0,138	0/1:9,0:12:13.67:14,0,68	1/1:6,1:7:3.01:47,3,0	1/1:6,1:8:12.01:153,12,0	./.	./.	./.	1/1:21,0:23:13.51:137,14,0	1/1:7,1:7:3.01:47,3,0	1/1:10,1:11:5.98:67,6,0	1/1:6,2:8:6.02:93,6,0	1/1:3,3:6:9.03:140,9,0
chr10	62746738	.	CT	C	3597.05	PASS	AB=0.958;AC=48;AF=0.857;AN=56;BaseQRankSum=3.926;DP=434;FS=5.326;HRun=13;HaplotypeScore=57.9482;InbreedingCoeff=0.6812;MQ=73.52;MQ0=8;MQRankSum=-3.527;QD=10.83;ReadPosRankSum=0.657;VQSLOD=3.1485;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,22:28:62.58:457,63,0	1/1:1,4:5:8.94:66,9,0	0/1:41,0:13:0.30:0,0,35	0/0:37,0:17:10.55:0,11,89	1/1:5,9:14:17.78:125,18,0	1/1:7,12:19:29.71:213,30,0	1/1:3,5:8:5.95:44,6,0	0/0:27,2:30:7.08:0,7,371	1/1:3,6:9:14.90:109,15,0	1/1:9,18:27:35.87:333,36,0	1/1:2,5:7:11.92:88,12,0	1/1:0,5:5:11.93:87,12,0	1/1:1,4:5:11.93:87,12,0	1/1:3,5:8:11.74:78,12,0	1/1:3,7:11:13.94:93,14,0	1/1:6,1:8:7:96,7,0	0/0:34,0:35:84.57:0,85,762	0/1:10,1:11:3.76:4,0,138	1/1:6,13:18:35.64:250,36,0	1/1:3,8:12:25.62:163,26,0	1/1:0,9:9:20.84:149,21,0	1/1:1,3:4:8.92:66,9,0	1/1:0,3:3:8.95:66,9,0	1/1:1,14:16:28.75:193,29,0	1/1:3,14:17:32.78:241,33,0	1/1:7,12:19:32.73:239,33,0	1/1:4,13:17:29.81:219,30,0	1/1:2,8:10:17.88:131,18,0
chr10	62747277	.	G	GA	10895.83	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-6.312;DP=546;FS=19.375;HRun=8;HaplotypeScore=66.4527;InbreedingCoeff=0.9824;MQ=69.26;MQ0=6;MQRankSum=-0.230;QD=26.19;ReadPosRankSum=3.901;VQSLOD=3.4795;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,30:34:78.06:877,78,0	0/0:7,0:7:15:0,15,137	0/0:21,0:16:32.73:0,33,352	0/0:17,0:16:40.10:0,40,299	1/1:5,17:21:45.13:511,45,0	1/1:6,9:15:27.08:312,27,0	1/1:4,22:26:57.17:658,57,0	0/0:31,0:31:72.02:0,72,658	1/1:1,14:15:39.12:450,39,0	1/1:5,28:32:84.23:960,84,0	1/1:1,6:7:12.03:136,12,0	1/1:1,22:23:54.16:623,54,0	1/1:2,18:20:51.15:587,51,0	1/1:0,11:11:33.10:381,33,0	1/1:3,20:23:48.14:554,48,0	1/1:3,15:18:45.13:519,45,0	0/0:28,0:27:69.04:0,69,631	0/0:26,0:24:66.03:0,66,604	1/1:2,11:15:35.98:387,36,0	1/1:1,5:6:12.03:136,12,0	1/1:1,10:11:21.06:242,21,0	1/1:0,16:16:42.12:478,42,0	1/1:1,10:11:21.53:243,22,0	1/1:3,26:29:44.74:766,45,0	1/1:0,15:15:36.11:415,36,0	1/1:3,15:18:45.10:492,45,0	1/1:1,22:23:54.16:616,54,0	1/1:6,19:24:48.14:554,48,0
chr10	62749574	.	CT	C	3934.13	PASS	AB=0.858;AC=38;AF=0.679;AN=56;BaseQRankSum=4.638;DP=429;FS=2.378;HRun=13;HaplotypeScore=49.3118;InbreedingCoeff=0.7935;MQ=73.63;MQ0=1;MQRankSum=0.317;QD=12.61;ReadPosRankSum=3.124;VQSLOD=3.7744;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,15:24:9.53:233,10,0	0/0:7,0:7:18.02:0,18,169	0/1:13,2:11:12.72:31,0,13	0/0:14,0:9:8.52:0,9,57	1/1:11,15:26:41.53:297,42,0	1/1:3,8:11:20.87:153,21,0	1/1:8,7:15:17.85:131,18,0	0/0:29,0:28:36.51:0,37,343	0/0:8,0:8:9.90:0,10,89	1/1:5,20:25:59.63:436,60,0	1/1:2,13:15:35.79:262,36,0	1/1:6,10:17:25.88:181,26,0	1/1:4,12:16:29.81:219,30,0	1/1:1,8:9:20.88:153,21,0	1/1:3,10:13:20.76:153,21,0	1/1:7,12:19:25.96:195,26,0	0/0:21,0:21:47.59:0,48,422	0/0:23,0:26:65.60:0,66,591	1/1:7,9:16:20.77:152,21,0	1/1:4,13:17:29.46:208,29,0	1/1:1,7:8:14.91:109,15,0	0/0:3,0:3:6.01:0,6,58	0/0:9,0:9:21.03:0,21,204	0/1:4,1:5:9.92:10,0,68	1/1:3,8:11:17.88:131,18,0	1/1:3,16:20:46.70:331,47,0	1/1:3,18:21:53.68:394,54,0	1/1:2,7:9:20.85:153,21,0
chr10	62750370	.	TA	T	20792.35	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=6.861;DP=853;FS=2.669;HRun=2;HaplotypeScore=94.3395;InbreedingCoeff=1.0000;MQ=73.30;MQ0=0;MQRankSum=-2.789;QD=35.66;ReadPosRankSum=4.218;VQSLOD=5.2231;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,123,1841	0/0:17,0:17:51.17:0,51,763	0/0:21,0:21:57.18:0,57,829	0/0:24,0:24:66.17:0,66,924	0/0:29,0:29:87.26:0,87,1276	1/1:0,26:26:72.23:935,72,0	1/1:0,34:34:96.31:1246,96,0	0/0:41,0:41:99:0,117,1715	0/0:34,1:35:66.40:0,66,1486	1/1:1,33:34:99:1284,99,0	1/1:0,15:15:42.14:545,42,0	1/1:0,37:37:99:1286,99,0	1/1:0,31:31:81.26:1052,81,0	1/1:2,29:31:81.26:1052,81,0	1/1:1,38:39:99:1319,102,0	1/1:0,37:37:99:1363,105,0	0/0:25,0:25:75.21:0,75,1077	0/0:30,0:29:78.26:0,78,1168	1/1:0,20:20:60.19:777,60,0	1/1:0,26:26:75.24:973,75,0	1/1:0,55:55:99:1986,153,0	1/1:2,24:26:66.21:857,66,0	1/1:0,20:20:60.20:779,60,0	1/1:1,39:40:96.31:1246,96,0	1/1:0,24:24:66.21:857,66,0	1/1:1,39:40:99:1480,114,0	1/1:0,28:28:81.26:1052,81,0	1/1:0,20:20:54.18:701,54,0
chr10	62750460	.	CTG	C	3647.40	PASS	AB=0.828;AC=43;AF=0.827;AN=52;BaseQRankSum=-1.872;DP=735;FS=1.700;HRun=0;HaplotypeScore=135.1673;InbreedingCoeff=0.4552;MQ=61.30;MQ0=12;MQRankSum=0.122;QD=5.98;ReadPosRankSum=1.976;VQSLOD=3.4641;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:40:5.68:28,6,0	1/1:5,0:8:5.68:28,6,0	./.	./.	1/1:12,0:20:2.84:14,3,0	1/1:21,1:24:10.92:102,11,0	0/1:20,12:31:21.04:186,0,21	0/1:29,0:32:2.47:19,0,2	1/1:21,0:33:25.57:126,26,0	1/1:19,3:23:11.36:111,11,0	1/1:10,0:10:3.01:32,3,0	1/1:22,5:29:43.13:394,43,0	1/1:21,9:31:38.92:398,39,0	1/1:26,4:33:25.49:189,25,0	1/1:18,13:32:53.96:563,54,0	1/1:32,15:53:26.55:577,27,0	1/1:13,0:23:17.03:83,17,0	1/1:15,0:24:11.36:56,11,0	1/1:13,0:14:8.82:68,9,0	0/1:16,2:19:27.50:89,0,27	1/1:54,6:62:26.89:268,27,0	0/0:23,0:24:16.77:0,17,168	0/0:19,0:22:24.52:0,25,297	0/0:28,0:31:23.99:0,24,224	1/1:4,1:5:5.85:47,6,0	1/1:24,1:28:8.69:61,9,0	1/1:13,2:15:12.03:131,12,0	1/1:14,2:16:8.76:78,9,0
chr10	62750907	.	TTTTTA	T	5422.17	PASS	AC=42;AF=0.840;AN=50;BaseQRankSum=2.667;DP=417;FS=10.732;HRun=0;HaplotypeScore=72.3084;InbreedingCoeff=0.5417;MQ=63.28;MQ0=2;MQRankSum=0.824;QD=16.48;ReadPosRankSum=1.856;VQSLOD=3.3356;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:15.05:0,15,408	./.	0/0:20,0:9:0.89:0,1,2	0/0:28,0:9:1.72:0,2,4	0/0:14,0:14:12.04:0,12,318	1/1:2,10:12:12.04:217,12,0	1/1:7,0:7:3.01:54,3,0	1/1:26,14:40:42.04:475,42,0	./.	1/1:12,3:15:9.03:162,9,0	1/1:6,4:10:12.04:198,12,0	1/1:6,2:8:6.02:108,6,0	1/1:8,3:11:9.03:162,9,0	1/1:7,0:7:6.02:108,6,0	./.	1/1:12,4:16:9.03:162,9,0	1/1:16,17:33:36.12:650,36,0	1/1:17,18:35:42.14:758,42,0	1/1:13,3:16:9.03:148,9,0	1/1:3,1:4:3.01:54,3,0	1/1:8,5:13:12.04:217,12,0	1/1:4,2:6:3.01:54,3,0	1/1:6,1:7:3.01:54,3,0	1/1:7,3:10:6.02:108,6,0	1/1:9,10:19:18.06:325,18,0	1/1:5,10:15:30.10:541,30,0	1/1:10,6:16:12.04:217,12,0	1/1:16,13:29:36.12:650,36,0
chr10	62751992	.	TA	T	3695.48	PASS	AB=0.763;AC=32;AF=0.571;AN=56;BaseQRankSum=4.099;DP=628;FS=0.822;HRun=14;HaplotypeScore=70.7656;InbreedingCoeff=0.6227;MQ=62.79;MQ0=3;MQRankSum=1.481;QD=9.40;ReadPosRankSum=4.398;VQSLOD=3.1575;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,5:36:7.04:0,7,331	0/0:12,0:12:6.31:0,6,188	0/0:23,0:7:7.85:0,8,57	0/1:22,0:17:7.99:8,0,106	0/0:26,2:29:9.77:0,10,314	1/1:4,14:19:34.73:232,35,0	1/1:4,14:19:31.77:211,32,0	0/0:35,1:33:27.41:0,27,375	0/0:12,0:12:22.97:0,23,112	1/1:7,18:26:24.33:305,24,0	1/1:6,13:20:32.53:222,33,0	1/1:3,16:19:13.80:239,14,0	0/1:7,13:21:17.51:174,0,18	1/1:4,9:14:33.98:218,34,0	1/1:3,15:18:13.81:239,14,0	1/1:3,20:24:42.65:279,43,0	0/1:30,3:31:32.82:33,0,268	0/0:25,0:28:8.14:0,8,323	1/1:9,8:14:23.68:161,24,0	0/1:5,14:19:36.98:196,0,37	1/1:5,10:15:14.81:103,15,0	0/0:15,0:15:14.98:0,15,127	0/0:19,1:22:3.77:0,4,296	0/0:18,0:19:42.77:0,43,378	1/1:5,26:32:46.73:314,47,0	1/1:7,22:31:44.66:436,45,0	1/1:7,19:27:9.92:203,10,0	1/1:4,10:14:17.77:123,18,0
chr10	62759286	.	A	AAAAC	17230.96	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=-15.452;DP=730;FS=1.087;HRun=0;HaplotypeScore=103.0596;InbreedingCoeff=0.9987;MQ=67.77;MQ0=4;MQRankSum=-2.232;QD=42.97;ReadPosRankSum=3.479;VQSLOD=4.9080;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:81.23:0,81,1278	0/0:8,0:8:21.07:0,21,353	0/0:36,0:31:47.31:0,47,631	0/0:30,0:26:24.15:0,24,448	0/0:25,0:25:54.18:0,54,878	1/1:4,12:16:27.09:670,27,0	1/1:7,26:34:60.12:1380,60,0	0/0:33,0:33:42.12:0,42,607	0/0:19,0:19:36.12:0,36,586	1/1:5,17:22:51.15:1111,51,0	1/1:3,17:20:46.35:1022,46,0	1/1:5,18:23:51.17:1265,51,0	1/1:7,14:23:30.10:734,30,0	1/1:7,13:21:30.10:735,30,0	1/1:10,26:36:69.23:1669,69,0	1/1:8,26:34:66.23:1586,66,0	0/0:34,0:34:75.24:0,75,1218	0/0:32,0:32:78.27:0,78,1281	1/1:13,15:28:51.16:1009,51,0	1/1:4,18:22:54.18:1258,54,0	1/1:3,15:19:33.11:819,33,0	0/0:15,0:15:33.11:0,33,524	0/0:31,0:31:75.26:0,75,1244	0/0:30,0:30:77.28:0,77,1210	1/1:4,21:25:30.10:743,30,0	1/1:4,15:19:42.14:926,42,0	1/1:9,33:42:60.21:1486,60,0	1/1:0,13:14:33.11:818,33,0
chr10	62759637	.	C	CAAAT	3950.28	PASS	AB=1.000;AC=37;AF=0.974;AN=38;BaseQRankSum=-1.592;DP=309;FS=7.318;HRun=0;HaplotypeScore=66.3907;InbreedingCoeff=-0.1205;MQ=67.94;MQ0=2;MQRankSum=1.019;QD=15.02;ReadPosRankSum=1.270;VQSLOD=2.3595;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:12,0:12:0.58:120,0,1	1/1:3,1:5:3.01:70,3,0	./.	./.	1/1:10,1:11:3.01:70,3,0	1/1:10,1:14:15.05:271,15,0	./.	1/1:36,0:35:5.46:26,5,0	1/1:13,0:13:3.01:52,3,0	1/1:3,0:3:3:25,3,0	./.	./.	./.	./.	1/1:6,1:8:6.02:121,6,0	1/1:7,0:8:6.02:104,6,0	1/1:13,18:33:33.20:1097,33,0	1/1:12,10:24:27.09:628,27,0	1/1:12,0:13:3.01:52,3,0	1/1:9,0:9:3.01:47,3,0	./.	./.	1/1:9,2:11:6.02:139,6,0	1/1:3,1:4:3.01:70,3,0	1/1:7,7:15:15.05:349,15,0	1/1:7,0:7:3.01:52,3,0	1/1:13,0:16:12.04:204,12,0	1/1:15,0:20:27.09:454,27,0
chr10	62759937	.	TA	T	1836.90	PASS	AB=0.660;AC=27;AF=0.482;AN=56;BaseQRankSum=3.261;DP=480;FS=3.371;HRun=15;HaplotypeScore=61.4736;InbreedingCoeff=0.4815;MQ=77.58;MQ0=6;MQRankSum=0.183;QD=7.32;ReadPosRankSum=4.364;VQSLOD=2.8214;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:26,4:31:5.29:5,0,433	0/0:11,0:11:17.86:0,18,143	0/0:42,2:21:2.39:0,2,159	0/0:43,0:26:15:0,15,164	0/0:13,0:13:24.62:0,25,196	1/1:3,18:22:37.47:237,37,0	1/1:4,7:11:17.68:115,18,0	0/0:25,3:29:18.14:0,18,380	0/0:15,0:17:42.09:0,42,330	1/1:5,6:11:14.68:95,15,0	1/1:2,3:4:8.85:58,9,0	1/1:5,12:17:23.53:154,24,0	0/1:4,10:15:0.67:115,0,1	1/1:2,10:12:11.45:155,11,0	0/1:2,12:15:0.66:115,0,1	1/1:4,10:14:0.25:127,0,0	0/0:15,1:16:19.72:0,20,295	0/0:16,5:22:12.27:0,12,337	0/1:7,5:12:9.14:77,0,9	0/1:7,4:11:34.30:43,0,34	0/1:5,6:13:23.94:47,0,24	0/0:2,0:5:11.68:0,12,81	0/0:3,0:11:14.43:0,14,81	0/0:1,0:18:19.89:0,20,99	1/1:5,11:16:2.29:113,2,0	1/1:4,11:17:33.58:203,34,0	1/1:1,19:20:44.05:288,44,0	0/1:1,7:9:6.68:82,0,7
chr10	62760214	.	GA	G	8709.73	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=16.987;DP=650;FS=9.238;HRun=8;HaplotypeScore=94.0493;InbreedingCoeff=0.9927;MQ=74.86;MQ0=1;MQRankSum=-2.898;QD=23.73;ReadPosRankSum=2.395;VQSLOD=5.0360;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,135,1586	0/0:13,0:13:30.08:0,30,352	0/0:23,0:23:56.77:0,57,585	0/0:13,0:13:14.01:0,14,258	0/0:17,0:17:45.13:0,45,532	1/1:0,17:17:45.07:432,45,0	1/1:4,16:20:42.07:405,42,0	0/0:28,0:28:60.16:0,60,703	0/0:27,0:27:66.17:0,66,767	1/1:3,16:19:51.08:492,51,0	1/1:3,11:14:30.52:290,31,0	1/1:6,24:30:73.05:694,73,0	1/1:0,29:29:75.11:718,75,0	1/1:2,22:24:69.57:661,70,0	1/1:1,34:35:96.15:926,96,0	1/1:6,28:35:84.60:810,85,0	0/0:33,0:32:90.26:0,90,1072	0/0:26,1:27:57.23:0,57,865	1/1:2,17:19:45.92:427,46,0	1/1:1,15:16:42.06:403,42,0	1/1:8,22:30:60.09:576,60,0	0/0:18,0:18:45.13:0,45,533	0/0:12,0:12:30.04:0,30,344	0/0:24,0:24:60.18:0,60,725	1/1:1,23:24:60.10:579,60,0	1/1:3,21:24:60.57:578,61,0	1/1:2,25:27:63.09:603,63,0	1/1:0,4:4:12.02:116,12,0
chr10	62763187	.	G	GTTGT	2654.02	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-8.944;DP=754;FS=2.073;HRun=0;HaplotypeScore=117.2675;InbreedingCoeff=0.9904;MQ=64.84;MQ0=0;MQRankSum=-3.036;QD=40.21;ReadPosRankSum=3.203;VQSLOD=3.8274;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,32:42:49.30:1612,49,0	0/0:7,0:7:15.05:0,15,251	0/0:37,0:29:35.11:0,35,471	0/0:35,0:29:51.58:0,52,735	1/1:4,18:24:51.13:1164,51,0	0/0:26,0:26:45.15:0,45,739	0/0:28,0:28:63.15:0,63,962	0/0:28,0:28:33.11:0,33,511	0/0:20,0:20:57.17:0,57,899	0/0:21,0:21:51.17:0,51,839	0/0:17,0:17:36.12:0,36,589	0/0:18,0:18:33.11:0,33,537	0/0:23,0:23:63.21:0,63,1040	0/0:17,0:17:39.12:0,39,562	0/0:38,0:38:96.32:0,96,1555	0/0:28,0:28:75.23:0,75,1148	0/0:26,0:26:63.21:0,63,1013	0/0:28,0:28:63.21:0,63,1038	0/0:22,0:22:45.12:0,45,662	0/0:33,0:33:81.27:0,81,1334	0/0:27,0:27:60.20:0,60,979	0/0:29,0:29:66.18:0,66,1022	0/0:25,0:25:51.15:0,51,801	0/0:40,0:40:99:0,99,1618	0/0:33,0:33:87.23:0,87,1374	0/0:28,0:28:66.22:0,66,1062	0/0:42,0:42:99:0,108,1765	0/0:11,0:11:24.08:0,24,375
chr10	62764395	.	GCA	G	368.56	PASS	AB=0.855;AC=14;AF=0.250;AN=56;BaseQRankSum=5.603;DP=362;FS=45.720;HRun=0;HaplotypeScore=73.9958;InbreedingCoeff=-0.3299;MQ=87.48;MQ0=0;MQRankSum=-1.399;QD=2.05;ReadPosRankSum=6.354;VQSLOD=-0.4364;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:22.76:0,23,358	0/0:7,0:7:20.98:0,21,250	0/0:24,0:20:43.19:0,43,425	0/0:27,0:25:52.71:0,53,553	0/0:11,1:12:12.02:0,12,156	0/1:8,2:11:39.01:62,0,39	0/1:16,2:19:70.43:70,0,143	0/0:11,0:11:27.05:0,27,279	0/1:4,3:7:10.17:80,0,10	0/1:11,0:12:2.46:2,0,146	0/0:4,0:4:11.98:0,12,97	0/1:9,2:11:40.44:40,0,48	0/1:6,2:8:31.02:31,0,66	0/1:9,1:11:27.04:27,0,99	0/1:19,1:20:16.78:17,0,210	0/1:9,5:14:50.04:50,0,159	0/0:26,0:26:59.67:0,60,606	0/0:21,0:21:36.38:0,36,530	0/1:12,0:14:24.92:25,0,141	0/1:9,1:10:22.98:23,0,46	0/1:12,1:13:14.65:15,0,49	0/0:3,0:3:6.01:0,6,63	0/0:7,0:7:15.34:0,15,208	0/0:11,0:11:29.95:0,30,393	0/0:10,1:11:18.40:0,18,144	0/1:17,1:18:33.04:33,0,169	0/1:10,2:12:43.94:44,0,99	0/0:5,0:5:2.35:0,2,56
chr10	62764397	.	ACC	A	2152.45	PASS	AB=0.844;AC=32;AF=0.571;AN=56;BaseQRankSum=0.511;DP=365;FS=2.053;HRun=13;HaplotypeScore=68.3127;InbreedingCoeff=0.7343;MQ=86.27;MQ0=0;MQRankSum=-0.139;QD=10.66;ReadPosRankSum=5.138;VQSLOD=2.1200;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:20.69:0,21,227	0/0:8,0:8:17.99:0,18,193	0/0:25,0:21:29.64:0,30,254	0/0:25,0:24:40.67:0,41,376	0/0:11,0:12:12.02:0,12,129	1/1:9,2:11:23.23:195,23,0	1/1:11,7:19:23.40:243,23,0	0/0:13,0:13:8.96:0,9,75	1/1:4,3:7:14.99:138,15,0	1/1:9,1:11:14.65:114,15,0	0/0:4,0:4:0:0,0,0	1/1:5,5:11:20.74:186,21,0	1/1:4,2:7:11.73:98,12,0	1/1:6,2:11:19.89:133,20,0	1/1:10,6:19:29.14:238,29,0	0/1:10,1:13:13.33:80,0,13	0/0:23,0:26:32.03:0,32,360	0/0:17,0:21:35.54:0,36,392	1/1:12,1:14:3.85:138,4,0	1/1:6,1:10:17.48:140,17,0	1/1:4,10:14:13.76:144,14,0	0/0:3,0:3:3.89:0,4,28	0/1:6,1:7:15.50:16,0,119	0/0:13,0:13:33.84:0,34,352	1/1:6,3:11:8.44:53,8,0	1/1:15,3:19:23.20:242,23,0	1/1:8,5:13:14.97:143,15,0	1/1:3,2:5:6:58,6,0
chr10	62764667	.	C	CCCTGGCCTGG	8468.11	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-8.132;DP=599;FS=3.076;HRun=0;HaplotypeScore=163.8130;InbreedingCoeff=0.9324;MQ=77.93;MQ0=0;MQRankSum=-10.502;QD=56.45;ReadPosRankSum=-0.121;VQSLOD=4.4429;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,17:41:48.16:2320,48,0	1/1:1,5:8:11.83:611,12,0	0/0:14,0:14:12.54:0,13,342	0/0:18,0:18:18.06:0,18,519	1/1:1,3:7:2.68:150,3,0	0/0:17,0:17:48.15:0,48,1360	0/0:30,0:30:75.22:0,75,2062	1/1:15,0:15:20.43:469,20,0	1/1:5,10:19:21.07:1070,21,0	0/0:16,0:16:30.08:0,30,859	0/0:3,0:3:6.02:0,6,167	0/0:29,0:29:78.23:0,78,2180	0/0:21,0:21:63.18:0,63,1737	0/0:17,0:17:42.14:0,42,1261	0/0:30,0:30:60.20:0,60,1563	0/0:27,0:27:69.24:0,69,2076	1/1:15,13:33:42.10:2008,42,0	1/1:6,17:27:36.12:1839,36,0	0/0:24,0:24:51.10:0,51,1165	0/0:9,0:9:24.08:0,24,703	0/0:76,0:76:99:0,187,5198	0/0:13,0:13:33.11:0,33,905	0/0:14,0:14:33.07:0,33,718	0/0:33,0:33:72.25:0,72,2054	0/0:20,0:20:48.15:0,48,1368	0/0:15,0:15:36.11:0,36,1008	0/0:12,0:12:36.08:0,36,908	0/0:11,0:11:30.10:0,30,795
chr10	62771795	.	TTGTG	T	887.86	PASS	AC=30;AF=0.600;AN=50;BaseQRankSum=1.629;DP=699;FS=12.086;HRun=0;HaplotypeScore=112.7577;InbreedingCoeff=0.6395;MQ=61.71;MQ0=22;MQRankSum=-2.542;QD=2.58;ReadPosRankSum=-2.550;VQSLOD=1.1059;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:18.06:0,18,318	0/0:9,0:9:14.07:0,14,249	./.	./.	0/0:22,0:22:14.96:0,15,177	1/1:17,5:22:15.04:211,15,0	1/1:25,4:29:1.78:44,2,0	0/0:25,0:24:0:0,0,0	0/0:16,0:18:8.23:0,8,37	1/1:15,1:15:3.01:46,3,0	1/1:10,0:10:2.92:17,3,0	1/1:25,8:34:6.02:92,6,0	1/1:23,0:23:6.01:73,6,0	1/1:22,1:23:3.48:47,3,0	1/1:18,7:25:3.01:46,3,0	1/1:21,9:29:12.82:148,13,0	0/0:40,0:49:28.17:0,28,584	0/0:30,0:28:40.65:0,41,717	1/1:15,0:15:0.47:1,0,0	./.	1/1:43,0:41:0.47:1,0,0	0/0:19,0:18:9.03:0,9,165	0/0:13,0:13:12.04:0,12,238	0/0:31,0:31:39.12:0,39,746	1/1:15,0:14:3.01:46,3,0	1/1:20,0:20:3:26,3,0	1/1:18,3:22:12.51:166,13,0	1/1:12,4:16:6.02:92,6,0
chr10	62772546	.	G	GCA	5207.16	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-10.485;DP=765;FS=10.579;HRun=0;HaplotypeScore=95.5823;InbreedingCoeff=0.9485;MQ=67.23;MQ0=0;MQRankSum=-0.339;QD=39.45;ReadPosRankSum=-0.173;VQSLOD=5.9644;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,129,1660	1/1:2,11:13:21.07:354,21,0	0/0:11,0:11:1.47:0,1,206	0/0:11,0:11:23.89:0,24,264	0/0:23,0:23:54.17:0,54,694	0/0:21,0:19:54.17:0,54,695	0/0:31,0:31:75.21:0,75,936	1/1:7,23:30:66.23:1107,66,0	1/1:2,21:24:60.21:1012,60,0	0/0:26,0:26:66.19:0,66,815	0/0:16,0:16:36.12:0,36,463	0/0:42,0:42:99:0,120,1516	0/0:18,0:18:48.16:0,48,618	0/0:30,0:30:72.23:0,72,926	0/0:34,0:34:84.27:0,84,1081	0/0:40,1:41:63.73:0,64,1364	1/1:5,34:39:93.32:1569,93,0	1/1:0,25:26:69.24:1164,69,0	0/0:21,0:21:51.14:0,51,628	0/0:17,0:17:33.11:0,33,425	0/0:65,0:65:99:0,181,2316	0/0:14,0:14:39.11:0,39,488	0/0:19,0:19:39.13:0,39,502	0/0:45,0:45:99:0,114,1467	0/0:18,0:18:51.17:0,51,656	0/0:44,0:44:99:0,111,1400	0/0:29,0:29:81.25:0,81,1028	0/0:7,0:7:21.07:0,21,270
chr10	62772681	.	C	CT	628.70	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=7.300;DP=675;FS=2.390;HRun=9;HaplotypeScore=87.6001;InbreedingCoeff=0.8380;MQ=72.40;MQ0=3;MQRankSum=-0.545;QD=8.85;ReadPosRankSum=-0.926;VQSLOD=2.1198;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:38:99:0,102,881	0/0:4,0:4:12:0,12,104	0/0:22,0:18:29.40:0,29,216	0/0:21,0:15:31.28:0,31,233	0/0:30,0:30:77.96:0,78,672	0/0:23,0:22:53.98:0,54,469	0/0:25,0:25:50.96:0,51,442	0/0:45,0:45:93.73:0,94,798	0/1:15,0:15:8.04:18,0,8	0/0:26,0:25:65.96:0,66,573	0/0:21,0:21:59.99:0,60,521	0/0:32,0:32:77.90:0,78,664	0/0:17,0:16:41.99:0,42,364	0/0:22,0:22:59.98:0,60,521	0/0:32,1:33:47.79:0,48,644	0/0:25,0:25:71.98:0,72,625	0/0:32,0:32:77.98:0,78,677	0/0:23,2:25:26.81:0,27,462	0/0:18,1:19:11.81:0,12,331	0/0:18,0:18:47.99:0,48,417	0/0:25,0:25:65.93:0,66,565	1/1:8,9:17:24.02:248,24,0	1/1:6,9:15:16.37:166,16,0	1/1:6,18:23:19.14:342,19,0	0/0:17,0:17:44.98:0,45,391	0/0:30,0:30:80.98:0,81,703	0/0:31,0:31:77.97:0,78,677	0/0:22,0:22:53.95:0,54,469
chr10	62772689	.	TTC	T	454.92	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=8.052;DP=663;FS=10.216;HRun=0;HaplotypeScore=98.1830;InbreedingCoeff=0.8378;MQ=68.12;MQ0=10;MQRankSum=1.148;QD=6.59;ReadPosRankSum=-1.762;VQSLOD=2.2458;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:41:99:0,123,1882	0/0:4,0:4:12.04:0,12,184	0/0:20,0:15:14.63:0,15,319	0/0:19,0:12:30.07:0,30,311	0/0:29,0:29:81.17:0,81,1281	0/0:21,0:21:63.18:0,63,983	0/0:21,0:20:54.15:0,54,866	0/0:47,0:47:72.46:0,72,1456	1/1:2,15:16:35.75:454,36,0	0/0:28,0:27:81.25:0,81,1250	0/0:20,0:20:60.18:0,60,947	0/0:28,0:28:78.18:0,78,1170	0/0:18,0:16:45.13:0,45,703	0/0:22,0:22:63.18:0,63,980	0/0:32,0:32:90.25:0,90,1360	0/0:26,0:26:75.23:0,75,1223	0/0:32,0:31:84.26:0,84,1341	0/0:22,0:22:63.18:0,63,975	0/0:16,0:16:47.17:0,47,650	0/0:16,0:16:48.16:0,48,790	0/0:25,0:25:75.15:0,75,1125	1/1:16,0:16:5.74:35,6,0	1/1:13,0:13:9.76:37,10,0	0/1:23,0:23:2.03:65,0,2	0/0:19,0:18:51.14:0,51,824	0/0:28,0:28:84.26:0,84,1337	0/0:37,0:35:99:0,105,1510	0/0:22,0:22:57.12:0,57,935
chr10	62776512	.	T	TCA	1401.01	PASS	AB=0.950;AC=37;AF=0.804;AN=46;BaseQRankSum=-0.340;DP=493;FS=0.000;HRun=0;HaplotypeScore=83.5794;InbreedingCoeff=0.0234;MQ=69.88;MQ0=18;MQRankSum=0.059;QD=3.82;ReadPosRankSum=-1.090;VQSLOD=2.1062;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:17,0:17:2.85:89,0,3	1/1:7,0:7:11.99:116,12,0	./.	./.	1/1:20,0:19:8.66:90,9,0	1/1:17,0:17:2.31:23,2,0	1/1:16,3:17:5.86:86,6,0	./.	1/1:12,4:18:7.84:92,8,0	1/1:18,0:17:4.73:47,5,0	1/1:13,0:12:2.65:23,3,0	0/1:15,0:15:17.94:18,0,25	1/1:15,0:13:3.01:42,3,0	1/1:11,0:10:5.55:48,6,0	1/1:11,5:16:2.46:42,2,0	0/1:16,5:24:47.50:98,0,47	1/1:19,0:19:14.63:154,15,0	1/1:11,1:16:12.46:118,12,0	1/1:17,0:15:3.01:42,3,0	0/1:16,0:15:0:0,0,0	1/1:41,1:42:20.98:200,21,0	./.	0/0:5,0:8:0.47:0,0,1	./.	0/0:12,0:11:2.99:0,3,31	0/1:20,0:20:15.85:112,0,16	1/1:16,1:16:2.98:43,3,0	1/1:5,0:7:3:28,3,0
chr10	62777072	.	TCC	T	744.43	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.168;DP=759;FS=0.908;HRun=4;HaplotypeScore=91.3723;InbreedingCoeff=0.9973;MQ=77.85;MQ0=0;MQRankSum=-0.541;QD=35.45;ReadPosRankSum=4.421;VQSLOD=2.9519;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,132,2472	0/0:9,0:9:24.08:0,24,441	0/0:31,0:29:81.26:0,81,1395	0/0:24,0:24:63.16:0,63,1023	0/0:18,0:18:51.16:0,51,921	0/0:19,0:19:51.17:0,51,955	0/0:24,0:24:69.24:0,69,1285	0/0:23,0:23:66.23:0,66,1230	1/1:1,20:21:57.19:839,57,0	0/0:20,0:20:57.20:0,57,1067	0/0:14,0:14:36.08:0,36,632	0/0:52,0:52:99:0,148,2729	0/0:35,0:35:93.28:0,93,1686	0/0:33,0:33:87.28:0,87,1594	0/0:50,0:50:99:0,138,2556	0/0:33,0:33:96.33:0,96,1784	0/0:30,0:30:90.31:0,90,1686	0/0:24,0:24:72.21:0,72,1275	0/0:27,0:27:75.23:0,75,1335	0/0:22,0:22:60.19:0,60,1092	0/0:30,0:30:90.28:0,90,1616	0/0:20,0:20:57.20:0,57,1057	0/0:16,0:16:48.16:0,48,873	0/0:49,0:49:99:0,135,2513	0/0:17,0:17:48.16:0,48,887	0/0:35,0:35:99:0,105,1906	0/0:27,0:27:81.26:0,81,1471	0/0:10,0:10:30.10:0,30,562
chr10	62777303	.	GTGA	G	1002.81	PASS	AB=0.964;AC=24;AF=0.522;AN=46;BaseQRankSum=0.071;DP=1018;FS=0.000;HRun=0;HaplotypeScore=87.5287;InbreedingCoeff=-0.1774;MQ=16.44;MQ0=390;MQRankSum=-1.222;QD=1.40;ReadPosRankSum=-0.782;VQSLOD=1.5376;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	1/1:16,0:9:0.47:1,0,0	0/0:24,1:10:3.85:0,4,64	1/1:94,1:17:8.88:83,9,0	0/0:16,0:1:0.89:0,1,2	0/1:48,0:17:10.51:11,0,45	0/1:35,3:13:99:167,0,100	1/1:3,1:3:0.89:2,1,0	0/1:65,2:26:99:106,0,154	0/1:47,1:18:14.71:59,0,15	0/1:68,0:18:45:45,0,70	0/1:39,1:11:17.97:18,0,29	0/1:44,2:21:13.88:147,0,14	0/1:55,0:18:8.53:9,0,112	0/0:42,0:21:26.30:0,26,276	0/1:29,2:7:2.60:97,0,3	0/0:13,0:3:2.80:0,3,13	0/0:132,15:60:17.47:0,17,145	0/1:15,1:14:14.24:20,0,14	1/1:9,1:6:4.33:22,4,0	0/1:75,2:29:13.06:13,0,71	./.	0/1:33,4:17:54.84:223,0,55	1/1:13,0:7:7.99:59,8,0	1/1:9,0:4:8.83:56,9,0
chr10	62777306	.	ATGG	A	292.13	PASS	AB=0.996;AC=12;AF=0.273;AN=44;BaseQRankSum=2.102;DP=1028;FS=23.345;HRun=0;HaplotypeScore=94.2687;InbreedingCoeff=-0.0080;MQ=16.58;MQ0=394;MQRankSum=-0.276;QD=0.77;ReadPosRankSum=3.443;VQSLOD=-0.4224;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	./.	0/0:24,0:11:3.01:0,3,35	0/1:91,0:17:12.52:24,0,13	0/0:15,0:1:2.98:0,3,21	0/0:51,0:19:11.97:0,12,122	0/1:37,0:10:53.61:84,0,54	0/0:4,0:3:0:0,0,0	0/1:70,0:31:27.22:27,0,184	0/1:45,0:17:35.46:61,0,35	0/0:69,0:20:8.71:0,9,106	0/0:43,0:12:3.48:0,3,35	0/1:46,0:21:22.79:23,0,37	0/0:55,0:18:18:0,18,202	0/0:45,0:21:23.25:0,23,302	1/1:31,0:7:6.01:59,6,0	0/0:14,0:3:3:0,3,26	0/0:148,1:59:18.51:0,19,213	0/0:15,0:13:1.04:0,1,10	1/1:8,2:6:0.28:13,0,0	0/0:75,0:28:8.97:0,9,104	./.	0/1:36,1:17:97.85:119,0,98	0/0:14,0:7:5.74:0,6,38	1/1:9,0:4:0.71:2,1,0
chr10	62777330	.	ATGG	A	155.08	PASS	AB=0.971;AC=11;AF=0.250;AN=44;BaseQRankSum=-2.758;DP=1002;FS=4.896;HRun=0;HaplotypeScore=97.2454;InbreedingCoeff=-0.0889;MQ=17.23;MQ0=406;MQRankSum=1.721;QD=0.40;ReadPosRankSum=-3.916;VQSLOD=0.6406;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	./.	0/1:28,0:14:19.99:20,0,62	0/1:91,0:23:21.58:22,0,191	0/0:38,0:1:3.01:0,3,36	0/0:38,0:17:14.94:0,15,159	0/0:31,0:12:24.93:0,25,220	./.	0/1:59,3:33:95.10:95,0,149	0/1:40,0:21:86.83:87,0,120	0/1:53,3:21:11.35:11,0,126	0/1:39,2:20:13.24:13,0,134	0/1:32,0:17:20.85:21,0,129	0/0:46,0:14:20.94:0,21,236	0/0:36,0:16:17.97:0,18,244	0/0:40,0:4:8.25:0,8,54	0/1:8,1:5:0.01:0,0,0	0/0:182,1:61:18.03:0,18,297	0/0:20,0:16:4.32:0,4,122	1/1:10,0:6:0.34:1,0,0	0/0:73,0:23:9:0,9,86	0/1:19,0:10:0:0,0,0	0/0:34,0:18:18.83:0,19,252	0/0:13,0:8:13.34:0,13,99	0/0:8,0:5:6.32:0,6,61
chr10	62777408	.	ATGG	A	443.48	PASS	AB=0.819;AC=14;AF=0.350;AN=40;BaseQRankSum=1.194;DP=519;FS=11.406;HRun=0;HaplotypeScore=49.2332;InbreedingCoeff=0.2172;MQ=17.55;MQ0=177;MQRankSum=-1.324;QD=2.06;ReadPosRankSum=2.648;VQSLOD=-0.1640;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:7:14.94:0,15,230	./.	./.	0/0:20,0:3:6.02:0,6,76	0/0:11,0:2:3.01:0,3,62	./.	./.	0/0:31,0:3:6.02:0,6,76	0/0:22,0:7:6.05:0,6,34	0/1:16,3:10:67.27:105,0,67	0/1:5,2:5:0:0,0,0	1/1:20,3:14:3.63:78,4,0	0/0:15,2:10:2.22:0,2,31	0/1:18,3:12:2.72:13,0,3	0/1:18,6:15:6.38:105,0,6	0/1:17,9:18:10.64:164,0,11	0/0:24,0:12:10.23:0,10,129	./.	./.	0/1:6,1:4:0:0,0,0	1/1:60,0:17:2.22:7,2,0	0/0:9,0:5:2.88:0,3,15	./.	0/0:30,0:15:11.97:0,12,102	0/0:7,1:4:0.89:0,1,2	1/1:17,2:8:3.01:44,3,0	1/1:5,2:3:3.01:43,3,0	./.
chr10	62777681	.	TGA	T	771.27	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=8.128;DP=657;FS=11.203;HRun=0;HaplotypeScore=102.1916;InbreedingCoeff=0.9176;MQ=74.57;MQ0=0;MQRankSum=-7.244;QD=22.68;ReadPosRankSum=0.927;VQSLOD=3.8204;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:81.26:0,81,1572	1/1:0,1:1:3.01:33,3,0	0/0:19,0:18:48.16:0,48,976	0/0:37,0:36:99:0,105,1966	0/0:14,0:14:36.12:0,36,730	0/0:18,0:18:51.18:0,51,1035	0/0:35,0:35:99:0,105,2084	1/1:0,15:15:39.11:458,39,0	0/0:25,0:25:69.24:0,69,1400	0/0:29,0:29:84.27:0,84,1658	0/0:12,0:12:36.12:0,36,719	0/0:35,0:35:93.32:0,93,1886	0/0:33,0:32:87.12:0,87,1720	0/0:37,0:37:99:0,99,1974	0/0:38,0:38:99:0,114,2314	0/0:32,0:32:93.32:0,93,1889	1/1:1,10:11:24.03:241,24,0	1/1:2,5:7:18.01:189,18,0	0/0:21,0:21:63.17:0,63,1180	0/0:14,0:14:36.12:0,36,731	0/0:59,0:59:99:0,163,3226	0/0:12,0:12:36.12:0,36,729	0/0:10,0:10:27.09:0,27,537	0/0:42,0:42:99:0,120,2414	0/0:15,0:15:42.14:0,42,852	0/0:26,0:26:78.22:0,78,1544	0/0:29,0:29:78.25:0,78,1583	0/0:2,0:2:6.02:0,6,122
chr10	62777684	.	TGAACAGTTATTCAA	T	2635.37	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=8.390;DP=658;FS=10.455;HRun=0;HaplotypeScore=253.1466;InbreedingCoeff=0.9155;MQ=75.82;MQ0=0;MQRankSum=-7.929;QD=85.01;ReadPosRankSum=2.180;VQSLOD=2.1296;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:75.26:0,75,5241	1/1:0,1:1:3.01:114,3,0	0/0:17,0:16:48.16:0,48,2658	0/0:36,0:35:99:0,105,6025	0/0:15,0:15:42.11:0,42,2590	0/0:19,0:19:54.19:0,54,3769	0/0:36,0:36:99:0,108,7009	1/1:2,12:14:33.11:1265,33,0	0/0:26,0:26:72.25:0,72,4913	0/0:30,0:30:90.31:0,90,6091	0/0:13,0:13:39.13:0,39,2722	0/0:34,0:34:93.28:0,93,6138	0/0:33,0:32:87.24:0,87,5336	0/0:35,0:35:99:0,102,6920	0/0:39,0:39:99:0,117,7776	0/0:32,0:32:93.24:0,93,6189	1/1:0,10:10:24.08:832,24,0	1/1:1,5:6:15.05:573,15,0	0/0:22,0:22:63.22:0,63,3670	0/0:14,0:14:42.14:0,42,2892	0/0:58,0:58:99:0,153,10135	0/0:13,0:13:39.13:0,39,2677	0/0:10,0:10:30.10:0,30,2059	0/0:42,0:42:99:0,114,7464	0/0:15,0:15:42.14:0,42,2851	0/0:28,0:28:84.29:0,84,5445	0/0:30,0:30:81.02:0,81,5653	0/0:2,0:2:6.02:0,6,428
chr10	62777770	.	G	GAATAATAATAATAAT	4927.47	PASS	AB=0.600;AC=7;AF=0.125;AN=56;BaseQRankSum=1.159;DP=681;FS=20.533;HRun=0;HaplotypeScore=261.9482;InbreedingCoeff=0.7615;MQ=70.86;MQ0=0;MQRankSum=-8.441;QD=75.81;ReadPosRankSum=-5.861;VQSLOD=2.6084;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:84.28:0,84,3165	1/1:3,0:3:3.01:161,3,0	0/0:14,0:14:35.95:0,36,945	0/0:21,0:21:44.60:0,45,1331	0/0:24,0:24:47.70:0,48,1686	0/0:28,0:28:63.21:0,63,2227	0/0:34,0:34:93.28:0,93,3327	1/1:40,0:37:72.23:2678,72,0	0/0:22,0:22:48.64:0,49,1936	0/0:35,0:35:78.25:0,78,2691	0/0:17,0:17:33.11:0,33,1142	0/0:40,0:40:99:0,99,3493	0/0:28,0:28:78.27:0,78,2904	0/0:22,0:22:57.20:0,57,2344	0/0:43,0:43:99:0,114,4355	0/0:45,0:45:99:0,120,4405	1/1:4,3:7:18.06:1232,18,0	0/1:5,7:15:99:857,0,111	0/0:17,0:17:48.16:0,48,1555	0/0:19,0:19:45.15:0,45,1532	0/0:28,0:28:71.30:0,71,2586	0/0:21,0:19:42.14:0,42,1657	0/0:16,0:16:36.12:0,36,1248	0/0:26,0:26:69.24:0,69,2490	0/0:24,0:24:57.20:0,57,2035	0/0:32,0:32:78.27:0,78,3009	0/0:21,0:21:51.17:0,51,1807	0/0:5,0:5:12.04:0,12,516
chr10	62783185	.	T	TGC	41.73	PASS	AB=0.727;AC=1;AF=0.018;AN=56;BaseQRankSum=2.412;DP=775;FS=0.000;HRun=0;HaplotypeScore=128.7931;InbreedingCoeff=-0.0182;MQ=63.04;MQ0=3;MQRankSum=-2.354;QD=2.61;ReadPosRankSum=-0.279;VQSLOD=2.0720;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:46:99:0,135,2123	0/0:9,0:9:27.09:0,27,432	0/0:39,0:30:86.74:0,87,1257	0/0:44,0:31:90.02:0,90,1319	0/0:17,0:17:51.17:0,51,831	0/0:26,0:26:72.25:0,72,1173	0/0:21,0:21:60.17:0,60,920	0/0:24,0:24:69.23:0,69,1103	0/1:9,6:16:99:116,0,132	0/0:36,0:36:99:0,102,1664	0/0:19,0:19:57.18:0,57,890	0/0:53,0:53:99:0,156,2482	0/0:18,0:18:54.18:0,54,874	0/0:26,0:26:78.27:0,78,1264	0/0:30,0:30:87.28:0,87,1394	0/0:18,0:18:51.17:0,51,817	0/0:27,0:27:81.21:0,81,1242	0/0:24,0:24:72.20:0,72,1127	0/0:25,0:25:75.24:0,75,1175	0/0:27,0:27:69.20:0,69,1069	0/0:55,0:55:99:0,157,2502	0/0:23,0:23:60.20:0,60,977	0/0:21,0:21:60.18:0,60,928	0/0:37,0:37:99:0,111,1776	0/0:21,0:21:60.20:0,60,973	0/0:38,0:38:99:0,114,1853	0/0:22,0:22:66.19:0,66,1026	0/0:11,0:11:33.11:0,33,538
chr10	62783191	.	C	CACAT	59.09	PASS	AB=0.739;AC=1;AF=0.018;AN=56;BaseQRankSum=3.418;DP=762;FS=2.140;HRun=0;HaplotypeScore=158.5632;InbreedingCoeff=-0.0182;MQ=66.10;MQ0=1;MQRankSum=-3.408;QD=3.48;ReadPosRankSum=-2.173;VQSLOD=2.5884;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:49:99:0,144,2717	0/0:9,0:9:27.09:0,27,534	0/0:32,0:27:67.15:0,67,1281	0/0:39,0:29:78.18:0,78,1363	0/0:18,0:18:51.13:0,51,1024	0/0:26,0:26:72.19:0,72,1403	0/0:19,0:19:54.17:0,54,1074	0/0:25,0:25:72.22:0,72,1359	0/1:11,6:17:99:134,0,191	0/0:39,0:39:99:0,111,2209	0/0:19,0:19:57.15:0,57,1149	0/0:57,0:57:99:0,162,2997	0/0:18,0:18:54.17:0,54,1065	0/0:29,0:29:84.26:0,84,1640	0/0:30,0:30:81.26:0,81,1642	0/0:20,0:20:54.11:0,54,1029	0/0:24,0:24:67.11:0,67,1379	0/0:21,0:21:63.10:0,63,1192	0/0:21,0:21:60.17:0,60,1176	0/0:24,0:24:66.21:0,66,1305	0/0:51,0:51:99:0,141,2905	0/0:24,0:24:66.23:0,66,1327	0/0:19,0:19:57.20:0,57,1135	0/0:38,0:38:99:0,111,2168	0/0:23,0:23:66.21:0,66,1324	0/0:38,0:38:99:0,111,2229	0/0:21,0:21:63.16:0,63,1267	0/0:11,0:11:33.11:0,33,690
chr10	62784767	.	C	CAAAA	10814.51	PASS	AB=0.765;AC=46;AF=0.821;AN=56;BaseQRankSum=0.572;DP=693;FS=6.092;HRun=15;HaplotypeScore=174.9994;InbreedingCoeff=-0.0662;MQ=62.42;MQ0=0;MQRankSum=-5.959;QD=15.81;ReadPosRankSum=-7.099;VQSLOD=-0.6891;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:17,0:41:50.34:50,0,82	0/0:3,0:9:2.43:0,2,6	0/1:12,0:7:24.32:31,0,24	0/1:11,0:10:28.45:41,0,28	0/1:18,0:34:32.06:32,0,118	1/1:10,3:15:9.03:164,9,0	1/1:23,4:28:21.22:289,21,0	0/1:23,0:32:17.37:141,0,17	1/1:11,0:25:22.97:209,23,0	1/1:11,0:26:41.27:439,41,0	1/1:5,7:18:46.77:657,47,0	1/1:30,0:30:64.66:1119,65,0	1/1:23,0:32:47.34:757,47,0	1/1:12,0:19:14.97:250,15,0	1/1:21,1:31:32.28:538,32,0	1/1:19,11:39:55.61:934,56,0	0/1:9,0:26:31.82:32,0,113	0/1:7,0:24:25.90:26,0,95	1/1:9,0:15:35.92:524,36,0	1/1:10,8:24:45.21:633,45,0	0/1:17,0:22:13.34:138,0,13	1/1:14,0:25:33.06:540,33,0	1/1:13,2:24:35.76:540,36,0	1/1:26,0:25:37.48:550,37,0	1/1:11,12:30:39.13:642,39,0	1/1:17,10:32:73.64:982,74,0	1/1:16,0:23:28.55:414,29,0	1/1:9,0:9:11.25:141,11,0
chr10	62785275	.	TAA	T	16007.37	PASS	AB=1.000;AC=39;AF=0.696;AN=56;BaseQRankSum=-1.426;DP=545;FS=0.720;HRun=2;HaplotypeScore=79.4967;InbreedingCoeff=0.9561;MQ=80.81;MQ0=7;MQRankSum=-4.648;QD=43.86;ReadPosRankSum=6.204;VQSLOD=4.5978;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:33.11:0,33,663	0/1:3,0:3:2.36:3,0,2	0/0:19,0:19:57.10:0,57,1074	0/0:11,0:11:33.08:0,33,570	0/0:29,0:29:87.30:0,87,1758	1/1:0,22:22:57.19:930,57,0	1/1:0,17:17:48.16:783,48,0	0/0:36,0:36:96.37:0,96,553	0/0:20,0:20:60.19:0,60,1140	1/1:0,27:26:78.25:1246,78,0	1/1:0,26:25:66.22:1063,66,0	1/1:0,23:23:63.22:1027,63,0	1/1:0,14:12:33.11:538,33,0	1/1:0,19:19:48.16:782,48,0	1/1:0,20:20:54.18:880,54,0	1/1:0,20:19:51.17:832,51,0	0/0:23,0:23:35.12:0,35,122	0/0:31,0:31:27.37:0,27,142	1/1:0,16:16:48.16:782,48,0	1/1:0,22:22:63.22:1027,63,0	1/1:0,9:9:27.09:440,27,0	1/1:0,9:9:24.08:391,24,0	1/1:0,18:18:45.15:734,45,0	1/1:0,6:6:18.06:293,18,0	1/1:0,12:11:30.10:489,30,0	1/1:0,38:38:99:1761,114,0	1/1:0,24:23:63.22:1027,63,0	1/1:0,20:20:60.20:978,60,0
chr10	62785279	.	AGT	A	3568.48	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=-7.104;DP=547;FS=13.693;HRun=0;HaplotypeScore=124.4038;InbreedingCoeff=0.5221;MQ=81.21;MQ0=7;MQRankSum=-3.357;QD=17.84;ReadPosRankSum=-2.567;VQSLOD=2.5296;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:36.05:0,36,603	1/1:0,5:5:9.03:132,9,0	0/0:21,0:21:57.14:0,57,936	0/0:10,0:10:30.06:0,30,481	0/0:29,0:29:87.25:0,87,1511	0/0:22,0:21:5.54:0,6,13	0/0:17,0:17:6.79:0,7,20	1/1:1,33:34:99:1423,102,0	0/0:18,0:18:51.17:0,51,948	0/0:27,0:26:31.24:0,31,170	1/1:25,0:24:0.40:33,0,0	0/0:22,0:22:0.46:0,0,6	0/1:14,0:12:0.87:1,0,1	0/1:19,0:19:15.94:16,0,18	0/0:22,0:22:1.20:0,1,8	0/0:20,0:19:1.67:0,2,8	1/1:0,22:22:54.18:794,54,0	1/1:0,31:31:78.18:1124,78,0	0/0:18,0:18:12.41:0,12,137	0/0:25,0:25:1.42:0,1,75	0/0:9,0:9:4.60:0,5,10	0/0:9,0:9:1.77:0,2,4	0/0:18,0:18:5.17:0,5,12	1/1:6,0:6:4.50:27,4,0	0/0:11,0:10:5.90:0,6,13	0/0:36,0:36:64.94:0,65,234	0/1:24,0:23:1.08:8,0,1	1/1:20,0:20:0.70:9,1,0
chr10	62785930	.	A	AGTGTGTGTGTGT	7266.17	PASS	AB=1.000;AC=47;AF=0.904;AN=52;BaseQRankSum=-2.736;DP=607;FS=7.526;HRun=0;HaplotypeScore=168.1462;InbreedingCoeff=0.3078;MQ=58.93;MQ0=17;MQRankSum=3.534;QD=14.08;ReadPosRankSum=0.435;VQSLOD=3.3988;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:16,15:38:3.01:175,3,0	1/1:4,0:4:5.99:49,6,0	0/0:35,0:21:5.85:0,6,61	0/0:36,0:23:10.57:0,11,102	./.	1/1:8,0:24:3.01:76,3,0	1/1:25,0:29:12.93:388,13,0	1/1:27,0:27:26.84:555,27,0	1/1:10,0:10:6.89:74,7,0	1/1:14,0:13:21.05:702,21,0	0/1:11,0:11:6.86:41,0,7	1/1:11,0:26:9.97:395,10,0	1/1:19,0:16:8.93:187,9,0	1/1:9,0:22:3.01:116,3,0	1/1:13,0:34:21.07:695,21,0	1/1:11,14:34:12.04:700,12,0	1/1:13,0:28:3.01:156,3,0	1/1:8,0:22:0.96:153,1,0	1/1:26,0:26:15.02:382,15,0	1/1:5,0:14:3.01:36,3,0	1/1:35,0:33:18.06:459,18,0	1/1:11,0:11:9.03:275,9,0	./.	1/1:21,0:19:6.02:137,6,0	1/1:6,0:6:3.01:65,3,0	1/1:21,0:20:37.89:761,38,0	1/1:13,0:24:12.04:426,12,0	1/1:8,0:8:9.03:263,9,0
chr10	62786225	.	C	CGGG	2357.29	PASS	AC=50;AF=0.926;AN=54;BaseQRankSum=-1.097;DP=213;FS=20.736;HRun=8;HaplotypeScore=45.2433;InbreedingCoeff=0.3862;MQ=86.87;MQ0=1;MQRankSum=-5.738;QD=12.88;ReadPosRankSum=1.278;VQSLOD=-0.2425;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,0:17:15.84:34,16,0	1/1:3,0:3:3.01:41,3,0	0/0:14,0:16:19.57:0,20,193	0/0:11,0:12:23.81:0,24,266	1/1:2,0:7:7.25:67,7,0	1/1:5,0:5:2.97:20,3,0	1/1:5,8:14:22.41:321,22,0	1/1:7,0:9:9.84:83,10,0	1/1:3,0:3:6:53,6,0	1/1:3,1:4:3.48:62,3,0	1/1:3,2:5:3.01:38,3,0	1/1:0,5:6:15.05:264,15,0	1/1:3,4:7:3.01:61,3,0	1/1:13,0:13:18.76:184,19,0	1/1:2,0:8:8.96:114,9,0	1/1:2,10:12:12.04:242,12,0	1/1:0,0:10:17.94:141,18,0	1/1:2,0:7:4.98:11,5,0	1/1:3,0:3:2.99:24,3,0	1/1:5,0:5:3:25,3,0	1/1:4,0:5:5.91:54,6,0	1/1:3,0:6:2.63:33,3,0	./.	1/1:5,1:6:6.02:121,6,0	1/1:6,0:6:11.24:83,11,0	1/1:5,0:5:9.88:94,10,0	1/1:5,4:11:18.02:267,18,0	1/1:2,0:5:5.98:46,6,0
chr10	62788153	.	A	AAG	4025.55	PASS	AB=0.712;AC=31;AF=0.554;AN=56;BaseQRankSum=-11.092;DP=568;FS=12.825;HRun=0;HaplotypeScore=71.2150;InbreedingCoeff=0.6887;MQ=56.06;MQ0=22;MQRankSum=7.347;QD=11.98;ReadPosRankSum=4.694;VQSLOD=2.2686;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:39.57:0,40,288	0/1:8,0:7:3.05:3,0,78	0/0:9,0:2:2.88:0,3,15	0/0:22,0:9:9.85:0,10,75	0/0:36,0:36:93.05:0,93,711	1/1:4,3:22:13.91:199,14,0	1/1:6,15:21:5.95:175,6,0	0/0:29,0:25:56.59:0,57,316	0/0:11,0:11:5.46:0,5,80	1/1:4,18:23:51.01:526,51,0	1/1:3,22:26:43.97:423,44,0	1/1:1,12:16:8.77:101,9,0	0/1:5,12:18:4.97:133,0,5	1/1:1,17:19:10.58:126,11,0	0/1:4,14:17:3.28:121,0,3	1/1:2,16:20:20.42:263,20,0	0/0:28,0:28:68.91:0,69,422	0/0:17,0:17:35.72:0,36,247	1/1:4,13:17:31.84:354,32,0	1/1:1,16:20:44.51:435,45,0	1/1:5,1:4:6.08:85,6,0	0/0:5,0:5:13.19:0,13,99	0/0:20,0:19:51.51:0,52,406	0/0:19,0:19:42.58:0,43,312	1/1:4,21:26:2.34:243,2,0	1/1:7,29:36:59.22:684,59,0	1/1:2,13:16:6.75:115,7,0	1/1:2,8:8:3.01:42,3,0
chr10	62788154	.	A	AG	641.83	PASS	AB=0.993;AC=18;AF=0.321;AN=56;BaseQRankSum=2.216;DP=576;FS=0.000;HRun=0;HaplotypeScore=77.4005;InbreedingCoeff=0.3021;MQ=57.06;MQ0=22;MQRankSum=-5.202;QD=2.71;ReadPosRankSum=4.795;VQSLOD=2.3673;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:38.38:0,38,274	1/1:5,1:10:0.53:12,1,0	0/0:11,0:4:5.83:0,6,32	0/1:23,0:10:10.04:10,0,41	0/0:37,0:37:92.86:0,93,710	0/1:21,0:21:25.28:25,0,72	0/0:23,0:20:1.53:0,2,12	1/1:30,0:26:30.78:275,31,0	1/1:3,8:11:8.36:49,8,0	0/0:24,0:23:45.72:0,46,275	0/0:28,0:26:24.10:0,24,165	0/1:17,0:17:2.23:2,0,11	0/1:19,0:18:5.19:5,0,30	1/1:19,0:19:2.76:17,3,0	0/0:17,0:15:3.81:0,4,30	0/0:20,0:20:0.09:0,0,16	0/1:30,0:30:38.69:256,0,39	1/1:16,0:17:5.26:139,5,0	0/0:19,0:17:33.49:0,33,207	0/0:22,0:21:15.94:0,16,121	0/0:7,0:4:4.60:0,5,22	0/0:5,0:5:14.93:0,15,119	0/0:20,0:19:52.21:0,52,410	0/0:19,0:19:41.79:0,42,330	0/1:26,0:25:0.65:1,0,29	0/0:36,0:35:65.08:0,65,392	0/0:16,0:16:6.46:0,6,25	1/1:11,0:9:0.42:1,0,0
chr10	62788163	.	AG	A	552.98	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=2.300;DP=580;FS=0.613;HRun=1;HaplotypeScore=76.3400;InbreedingCoeff=0.7853;MQ=61.36;MQ0=18;MQRankSum=-3.727;QD=10.24;ReadPosRankSum=-3.785;VQSLOD=0.0731;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:12.53:0,13,411	0/0:11,0:10:21:0,21,254	0/0:13,0:5:6.25:0,6,19	0/0:29,0:14:22.51:0,23,260	0/0:35,1:36:63.48:0,63,1149	0/0:20,0:20:24.07:0,24,326	0/0:21,0:19:24:0,24,296	0/0:33,0:29:84.65:0,85,1118	0/0:12,0:12:17.97:0,18,199	0/0:29,0:28:81.14:0,81,1137	0/0:27,0:25:45.64:0,46,735	0/0:16,0:16:8.70:0,9,105	0/0:15,0:15:17.51:0,18,162	0/0:18,0:18:14.26:0,14,177	0/0:15,0:13:10.89:0,11,207	0/0:20,0:20:30.56:0,31,403	0/0:30,1:31:82.24:0,82,1141	0/0:19,0:18:46.95:0,47,552	0/0:18,0:17:51.16:0,51,698	0/0:22,0:21:47.94:0,48,686	0/1:7,0:4:2.37:2,0,118	1/1:6,0:6:11.46:120,11,0	1/1:19,2:20:36.10:318,36,0	1/1:20,0:20:23.09:252,23,0	0/0:29,0:28:36:0,36,465	0/0:34,0:33:93.21:0,93,1323	0/0:16,0:16:8.91:0,9,95	0/0:15,0:15:24.08:0,24,343
chr10	62789329	.	CT	C	8771.83	PASS	AB=0.818;AC=48;AF=0.857;AN=56;BaseQRankSum=5.638;DP=616;FS=0.484;HRun=11;HaplotypeScore=68.4772;InbreedingCoeff=0.6890;MQ=67.38;MQ0=10;MQRankSum=-1.060;QD=16.33;ReadPosRankSum=0.743;VQSLOD=5.5697;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:35:71.33:0,71,931	1/1:1,7:8:17.64:147,18,0	0/0:13,0:7:4.19:0,4,21	0/1:14,0:8:9.05:9,0,69	0/0:31,0:31:68.36:0,68,725	1/1:2,19:21:55.97:449,56,0	1/1:4,17:19:41.95:345,42,0	1/1:18,27:44:22.82:601,23,0	1/1:2,8:10:17.97:148,18,0	1/1:4,13:17:38.93:320,39,0	1/1:3,19:22:47.90:394,48,0	1/1:2,13:15:26.95:222,27,0	1/1:5,19:24:50.92:418,51,0	1/1:0,17:17:38.96:320,39,0	1/1:3,21:24:53.82:442,54,0	1/1:5,15:20:38.91:320,39,0	1/1:5,29:34:50.31:610,50,0	1/1:5,14:19:32.95:271,33,0	1/1:11,21:32:30.89:456,31,0	1/1:4,28:31:74.88:615,75,0	0/1:6,8:13:7.94:148,0,8	1/1:3,18:21:47.91:393,48,0	1/1:2,19:21:47.94:394,48,0	1/1:4,9:13:28.03:209,28,0	1/1:5,24:29:33.92:484,34,0	1/1:4,18:22:24.93:411,25,0	1/1:7,11:19:31.97:252,32,0	1/1:1,20:20:47.95:394,48,0
chr10	62790124	.	GAAA	G	2290.58	PASS	AB=0.708;AC=28;AF=0.500;AN=56;BaseQRankSum=-3.261;DP=504;FS=0.000;HRun=17;HaplotypeScore=80.8810;InbreedingCoeff=0.4287;MQ=58.88;MQ0=5;MQRankSum=1.096;QD=7.46;ReadPosRankSum=2.583;VQSLOD=-0.7120;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:45:83.52:0,84,1043	0/0:5,0:5:4.35:0,4,12	0/0:42,0:11:5.88:0,6,37	0/1:30,0:10:5.49:5,0,34	0/0:16,0:17:37.13:0,37,353	0/1:6,4:12:4.61:132,0,5	1/1:15,4:21:30.26:343,30,0	0/0:10,0:19:19.80:0,20,115	0/0:14,0:14:10.47:0,10,68	1/1:7,10:16:20.62:213,21,0	1/1:7,10:17:7.21:103,7,0	1/1:9,6:15:15.79:162,16,0	1/1:6,5:10:1.77:55,2,0	1/1:5,6:11:14.83:153,15,0	0/1:4,8:14:3.56:148,0,4	1/1:3,6:11:16.48:168,16,0	0/1:30,0:41:22.29:22,0,118	0/0:14,0:18:6.71:0,7,90	1/1:6,14:19:40.69:327,41,0	0/1:5,6:13:17.91:76,0,18	0/1:9,7:17:1.51:146,0,2	0/0:3,0:3:8.56:0,9,46	0/0:8,0:7:15.03:0,15,209	0/0:23,0:24:61.39:0,61,813	1/1:8,2:10:8.77:92,9,0	0/1:5,6:10:2.93:129,0,3	0/1:6,5:11:1.44:27,0,1	1/1:18,4:23:3.61:174,4,0
chr10	62790553	.	TACAC	T	1216.77	PASS	AB=0.939;AC=28;AF=0.538;AN=52;BaseQRankSum=-1.158;DP=501;FS=5.986;HRun=0;HaplotypeScore=96.1138;InbreedingCoeff=0.0946;MQ=54.21;MQ0=24;MQRankSum=2.673;QD=3.71;ReadPosRankSum=2.900;VQSLOD=1.3187;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:32:8.71:0,9,130	1/1:3,0:3:2.96:19,3,0	./.	0/0:25,0:13:0.47:0,0,1	0/0:17,0:16:6.81:0,7,40	1/1:12,0:12:6.02:77,6,0	0/1:20,2:21:1.28:159,0,1	0/0:17,0:17:2.74:0,3,12	0/0:12,0:13:0.47:0,0,1	0/1:15,0:13:9.51:28,0,10	1/1:13,2:15:4.15:62,4,0	1/1:12,0:12:1.98:20,2,0	1/1:5,8:12:3.01:46,3,0	1/1:22,0:22:0.79:12,1,0	0/1:16,0:21:6.46:16,0,6	1/1:20,0:21:7.91:145,8,0	0/0:24,0:24:11.34:0,11,73	0/0:16,0:16:9.79:0,10,66	0/1:12,0:12:19.02:19,0,34	0/1:9,0:11:0.23:39,0,0	0/1:44,3:45:8.59:253,0,9	1/1:15,0:15:6.14:55,6,0	0/1:8,0:6:13.02:64,0,13	1/1:35,4:38:22.39:275,22,0	0/1:11,0:10:0:0,0,0	0/1:17,0:16:20.23:60,0,20	0/1:10,0:10:8.68:9,0,16	./.
chr10	62790708	.	A	AAT	23297.21	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-15.007;DP=687;FS=1.850;HRun=0;HaplotypeScore=70.5339;InbreedingCoeff=0.9948;MQ=92.45;MQ0=0;MQRankSum=-5.155;QD=48.54;ReadPosRankSum=4.993;VQSLOD=5.7262;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:96.27:0,96,1358	1/1:0,11:12:33.07:582,33,0	0/0:28,0:28:75.25:0,75,1101	0/0:38,0:36:87.22:0,87,1201	0/0:17,0:17:45.15:0,45,660	1/1:0,28:29:75.26:1405,75,0	1/1:1,26:27:69.24:1289,69,0	1/1:5,19:25:60.19:1087,60,0	0/0:15,0:15:42.11:0,42,595	1/1:0,37:37:99:1999,108,0	1/1:1,17:18:54.18:979,54,0	1/1:2,18:21:48.16:897,48,0	1/1:3,22:25:60.21:1123,60,0	1/1:1,30:31:90.31:1662,90,0	1/1:2,25:27:60.21:1123,60,0	1/1:0,23:24:66.23:1236,66,0	1/1:0,14:14:39.13:731,39,0	1/1:3,25:29:72.25:1348,72,0	1/1:1,21:23:63.22:1151,63,0	1/1:0,21:21:60.21:1123,60,0	1/1:2,22:24:54.19:1011,54,0	0/0:28,0:28:78.22:0,78,1104	0/0:22,0:22:60.19:0,60,863	0/0:26,0:26:63.21:0,63,924	1/1:0,20:20:57.20:1067,57,0	1/1:1,31:33:96.32:1742,96,0	1/1:0,33:34:81.28:1517,81,0	1/1:0,6:6:12.04:225,12,0
chr10	62791974	.	GTGTA	G	528.87	PASS	AB=0.951;AC=17;AF=0.304;AN=56;BaseQRankSum=0.478;DP=695;FS=0.000;HRun=0;HaplotypeScore=235.0632;InbreedingCoeff=-0.0421;MQ=42.66;MQ0=22;MQRankSum=-5.336;QD=1.49;ReadPosRankSum=-8.137;VQSLOD=0.3326;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:59.54:0,60,1417	0/0:5,0:5:15.03:0,15,231	0/0:67,0:13:4.69:0,5,207	0/0:53,0:10:1.37:0,1,123	0/0:14,0:12:23.88:0,24,580	0/1:12,2:13:9.58:49,0,10	0/1:32,1:32:29.63:33,0,30	0/1:32,0:29:15.40:15,0,645	0/0:22,0:22:47.38:0,47,698	0/1:22,1:21:44.77:65,0,45	0/0:13,0:12:7.32:0,7,16	0/1:21,2:23:20.83:40,0,21	0/0:18,0:18:15.92:0,16,41	0/1:28,1:28:2.63:3,0,13	0/1:29,3:32:13.63:90,0,14	0/1:17,0:17:14.74:15,0,26	0/0:34,0:31:26.23:0,26,630	0/0:21,0:20:29.58:0,30,460	0/1:21,0:21:38.39:82,0,38	0/1:9,2:11:0.52:7,0,1	0/1:48,1:46:2.76:9,0,3	0/0:18,0:18:0.63:0,1,3	1/1:8,1:9:2.16:79,2,0	0/0:28,0:27:9.25:0,9,21	0/1:17,1:18:0.08:55,0,0	1/1:29,1:28:0.24:127,0,0	0/1:13,0:11:4.37:4,0,10	0/0:15,0:15:9.97:0,10,22
chr10	62791976	.	GTA	G	8769.11	PASS	AB=0.956;AC=43;AF=0.768;AN=56;BaseQRankSum=-1.718;DP=677;FS=4.752;HRun=0;HaplotypeScore=188.7498;InbreedingCoeff=0.4983;MQ=42.04;MQ0=22;MQRankSum=-1.604;QD=15.28;ReadPosRankSum=-1.724;VQSLOD=4.4561;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:59.75:0,60,1110	0/0:5,0:5:14.95:0,15,122	0/1:67,0:11:0.79:1,0,219	0/0:53,0:8:2.89:0,3,156	0/0:14,0:12:23.90:0,24,421	1/1:5,9:13:33.07:463,33,0	1/1:11,22:32:56.70:782,57,0	0/1:29,2:28:99:143,0,257	0/1:20,2:22:40.76:41,0,333	1/1:11,11:20:56.92:721,57,0	1/1:2,9:10:18.06:274,18,0	1/1:5,18:23:24.75:316,25,0	1/1:1,17:18:36.05:537,36,0	1/1:9,19:27:42.95:607,43,0	1/1:7,25:32:50.47:648,50,0	1/1:7,10:17:39.54:529,40,0	0/1:32,1:30:18.18:18,0,282	0/1:20,1:20:35.61:36,0,184	1/1:4,16:20:28.85:470,29,0	1/1:3,8:11:11.73:150,12,0	1/1:28,20:44:27.43:358,27,0	1/1:11,6:17:17.91:228,18,0	1/1:3,6:9:11.71:121,12,0	1/1:8,19:26:24.43:361,24,0	1/1:9,9:18:29.16:367,29,0	1/1:8,19:25:71.48:857,71,0	1/1:4,9:12:27.01:381,27,0	1/1:3,9:12:24.08:364,24,0
chr10	62791992	.	CTG	C	392.55	PASS	AB=1.000;AC=10;AF=0.179;AN=56;BaseQRankSum=-2.336;DP=579;FS=2.977;HRun=0;HaplotypeScore=204.2661;InbreedingCoeff=0.5172;MQ=37.01;MQ0=28;MQRankSum=1.666;QD=3.02;ReadPosRankSum=-2.559;VQSLOD=2.5346;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:12,15:27:29.97:322,30,0	0/0:4,0:4:2.99:0,3,24	1/1:50,0:5:2.67:11,3,0	0/0:42,0:6:2.99:0,3,72	1/1:7,6:11:15.04:180,15,0	0/0:12,0:11:17.78:0,18,137	0/0:36,0:34:21.25:0,21,127	0/0:25,0:22:6.09:0,6,294	0/0:23,0:22:12.68:0,13,195	0/0:20,0:18:31.88:0,32,236	0/1:10,0:9:0:0,0,0	0/0:19,0:19:8.43:0,8,55	0/0:17,0:16:19.55:0,20,134	0/0:22,0:23:3.81:0,4,50	0/0:29,0:29:16.25:0,16,113	0/0:12,0:12:16.05:0,16,121	0/0:30,0:26:22.03:0,22,262	0/0:21,0:20:31:0,31,226	0/0:24,0:20:18:0,18,174	0/1:6,0:6:0.01:0,0,0	0/0:39,0:36:4.43:0,4,23	0/1:12,0:11:0.07:1,0,0	0/0:7,0:7:2.89:0,3,19	0/0:24,0:24:2.88:0,3,32	0/1:12,0:12:0.26:0,0,22	0/0:23,0:20:35.80:0,36,274	0/0:11,0:9:10.47:0,10,65	0/0:8,0:8:9.42:0,9,43
chr10	62792000	.	G	GTGTC	11410.44	PASS	AB=1.000;AC=49;AF=0.875;AN=56;BaseQRankSum=-2.894;DP=553;FS=1.706;HRun=0;HaplotypeScore=175.7350;InbreedingCoeff=0.5763;MQ=34.54;MQ0=35;MQRankSum=-1.404;QD=23.82;ReadPosRankSum=3.657;VQSLOD=4.9503;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:27.11:0,27,314	1/1:0,2:2:6.02:153,6,0	1/1:43,0:2:2.92:17,3,0	0/0:40,0:5:11.24:0,11,68	0/1:13,0:11:2.71:3,0,114	1/1:5,9:13:26.89:619,27,0	1/1:14,19:31:31.76:701,32,0	1/1:5,18:21:27.37:971,27,0	1/1:6,16:22:19.96:902,20,0	1/1:5,12:15:31.36:876,31,0	0/0:3,3:5:0.47:0,0,1	1/1:6,12:19:26.79:504,27,0	1/1:5,9:13:26.77:562,27,0	1/1:8,13:22:23.48:539,23,0	1/1:7,16:23:28:642,28,0	1/1:7,5:12:23.98:481,24,0	1/1:7,25:27:26.13:1032,26,0	1/1:6,16:20:17.16:790,17,0	1/1:16,2:14:21.41:292,21,0	1/1:5,3:8:2.28:12,2,0	1/1:24,16:38:6.41:95,6,0	1/1:2,10:11:3.35:57,3,0	1/1:2,4:6:5.97:134,6,0	1/1:16,11:24:9.57:174,10,0	1/1:7,7:14:16.29:271,16,0	1/1:9,12:18:24.08:851,24,0	1/1:4,6:8:6.29:341,6,0	1/1:5,3:8:21.05:391,21,0
chr10	62792026	.	T	TTGTG	481.65	PASS	AB=0.994;AC=31;AF=0.620;AN=50;BaseQRankSum=-2.367;DP=439;FS=0.000;HRun=0;HaplotypeScore=180.6786;InbreedingCoeff=0.0874;MQ=30.07;MQ0=31;MQRankSum=0.609;QD=1.41;ReadPosRankSum=1.195;VQSLOD=2.6157;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:24,2:26:5.44:121,0,5	./.	./.	0/1:33,0:3:1.48:1,0,4	1/1:17,3:17:5.66:93,6,0	0/1:12,0:11:0.07:0,0,0	0/1:26,0:23:0.07:0,0,1	0/1:8,0:6:0:0,0,0	0/1:15,0:13:0.98:18,0,1	0/1:18,0:16:5.68:53,0,6	0/0:5,0:4:0.47:0,0,1	0/1:15,0:15:0.07:0,0,0	0/1:11,0:9:0.10:0,0,0	1/1:19,0:17:4.27:58,4,0	1/1:17,0:16:2.35:15,2,0	1/1:7,0:7:0.47:1,0,0	0/1:22,0:19:25.73:26,0,41	1/1:14,0:13:4.07:51,4,0	1/1:10,0:4:3:25,3,0	0/0:5,0:5:0.30:0,0,1	0/0:42,0:38:2.07:0,2,32	0/0:10,0:9:0.44:0,0,1	./.	1/1:30,0:26:0.92:12,1,0	1/1:13,0:13:2.19:7,2,0	1/1:13,0:10:3.45:31,3,0	0/1:11,0:8:9.12:28,0,9	1/1:1,0:1:3.01:38,3,0
chr10	62792028	.	G	GCC	739.27	PASS	AB=0.985;AC=20;AF=0.385;AN=52;BaseQRankSum=2.454;DP=471;FS=0.790;HRun=0;HaplotypeScore=182.7783;InbreedingCoeff=-0.1373;MQ=27.22;MQ0=37;MQRankSum=-3.105;QD=2.96;ReadPosRankSum=-5.092;VQSLOD=1.2783;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:27.31:0,27,265	./.	./.	0/0:36,0:3:8.96:0,9,91	0/0:21,0:17:11.03:0,11,142	0/1:13,0:12:13.98:14,0,31	0/0:27,2:24:3.57:0,4,33	0/1:14,0:11:99:201,0,130	0/1:15,0:13:56.07:56,0,223	0/1:19,0:17:75.90:76,0,394	0/1:5,0:4:0.05:0,0,0	0/1:16,0:16:52.35:52,0,61	0/1:12,0:10:59.79:60,0,78	0/1:16,1:15:2.84:172,0,3	1/1:20,0:18:0.17:17,0,0	0/1:8,0:8:28.86:29,0,29	0/0:23,0:19:39.51:0,40,512	0/1:12,0:11:0.35:0,0,210	0/0:11,0:5:8.51:0,9,82	0/0:6,0:6:0:0,0,0	0/1:45,0:39:2.69:3,0,20	1/1:11,1:11:3.72:40,4,0	0/1:4,0:4:0:0,0,0	0/0:29,2:27:0.46:0,0,21	1/1:14,1:15:5.69:59,6,0	0/1:11,1:9:38.51:39,0,180	0/1:10,1:8:56.03:56,0,142	0/0:1,0:1:2.94:0,3,18
chr10	62792047	.	TGC	T	761.59	PASS	AB=0.995;AC=30;AF=0.556;AN=54;BaseQRankSum=2.063;DP=493;FS=27.728;HRun=0;HaplotypeScore=151.5962;InbreedingCoeff=-0.1564;MQ=30.93;MQ0=46;MQRankSum=2.315;QD=2.34;ReadPosRankSum=1.352;VQSLOD=0.6332;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:31:76.07:81,0,76	1/1:3,0:2:5.98:47,6,0	./.	0/0:41,0:4:9.89:0,10,61	0/1:20,0:18:15.08:72,0,15	0/0:7,0:6:2.96:0,3,19	0/0:26,0:20:7.23:0,7,41	0/0:13,0:9:26.87:0,27,205	0/1:12,0:11:14.28:14,0,17	0/1:17,0:14:77.70:78,0,78	1/1:6,0:4:0.47:1,0,0	0/1:17,0:15:13.36:13,0,29	1/1:9,0:8:3.34:19,3,0	0/1:20,0:17:17.51:37,0,18	0/1:23,0:20:12.95:21,0,13	0/1:17,0:17:1.20:18,0,1	0/1:18,0:15:50.44:64,0,50	0/1:11,1:11:4.02:102,0,4	0/1:10,0:5:8.03:59,0,8	0/1:8,0:7:9.70:16,0,10	0/0:44,0:38:6.45:0,6,37	1/1:11,0:10:3.47:26,3,0	0/1:6,0:6:1.15:18,0,1	1/1:33,2:30:2.54:21,3,0	1/1:16,0:15:1.92:22,2,0	0/1:20,0:17:32.83:33,0,172	1/1:10,0:8:3.76:87,4,0	1/1:4,1:3:7.54:61,8,0
chr10	62792066	.	TTGTGTG	T	2436.53	PASS	AB=0.969;AC=36;AF=0.692;AN=52;BaseQRankSum=-2.866;DP=543;FS=0.000;HRun=0;HaplotypeScore=168.5203;InbreedingCoeff=-0.0944;MQ=36.50;MQ0=47;MQRankSum=0.621;QD=5.75;ReadPosRankSum=-0.256;VQSLOD=2.5994;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:6.60:0,7,62	0/1:7,0:6:25.76:46,0,26	./.	./.	0/1:20,0:19:8.01:22,0,8	1/1:6,1:7:8.64:73,9,0	1/1:26,0:20:2.26:19,2,0	0/0:18,0:14:1.25:0,1,4	0/1:10,0:8:5.69:6,0,7	1/1:23,2:22:0.53:249,1,0	0/1:10,0:8:20.26:88,0,20	1/1:12,2:12:6.46:75,6,0	0/1:11,0:11:10.92:62,0,11	1/1:20,3:20:1.27:223,1,0	1/1:25,2:23:21.62:302,22,0	1/1:9,10:21:3.82:74,4,0	0/0:21,0:17:3.60:0,4,50	0/1:15,0:13:10.07:37,0,10	0/1:13,0:7:11.39:11,0,23	0/1:11,2:11:5.92:158,0,6	0/1:46,3:42:24.73:32,0,25	1/1:17,0:15:18.41:212,18,0	1/1:10,0:10:19.24:189,19,0	1/1:34,0:27:13.90:120,14,0	1/1:11,8:18:2.83:22,3,0	0/1:29,0:26:26.33:237,0,26	1/1:13,1:11:5.41:201,5,0	1/1:7,0:5:8.87:119,9,0
chr10	62792366	.	C	CTGTGTGTGTG	5806.53	PASS	AB=0.779;AC=35;AF=0.921;AN=38;BaseQRankSum=-2.165;DP=506;FS=0.000;HRun=0;HaplotypeScore=159.3398;InbreedingCoeff=0.1736;MQ=50.88;MQ0=10;MQRankSum=-0.616;QD=16.40;ReadPosRankSum=0.205;VQSLOD=3.7281;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	1/1:14,0:13:5.98:81,6,0	1/1:14,0:14:3.01:138,3,0	1/1:17,0:17:0.47:1,0,0	1/1:35,0:33:54.44:1185,54,0	0/1:22,0:22:0.43:50,0,0	1/1:11,2:15:27.09:979,27,0	./.	0/1:9,7:19:0:0,0,0	1/1:6,0:6:6.02:230,6,0	1/1:15,0:14:3.01:138,3,0	0/1:15,11:28:0.01:0,0,0	./.	1/1:25,0:23:6.89:123,7,0	1/1:11,0:13:11.35:288,11,0	1/1:20,4:25:28.79:780,29,0	./.	./.	1/1:12,0:12:3.01:90,3,0	1/1:10,0:9:2.99:24,3,0	1/1:20,0:30:2.49:17,2,0	./.	1/1:26,0:28:43.37:1275,43,0	1/1:16,5:21:12.47:309,12,0	1/1:2,1:2:3.01:97,3,0
chr10	62792393	.	T	TGTGTGTGTGTGC	7313.12	PASS	AB=0.936;AC=40;AF=0.800;AN=50;BaseQRankSum=-2.792;DP=464;FS=2.105;HRun=0;HaplotypeScore=163.8879;InbreedingCoeff=0.0074;MQ=43.64;MQ0=8;MQRankSum=-1.728;QD=18.19;ReadPosRankSum=-1.254;VQSLOD=4.0368;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:31,0:29:14.97:121,15,0	./.	1/1:9,0:3:1.25:3,1,0	0/0:6,0:3:2.80:0,3,13	1/1:3,0:12:5.97:102,6,0	1/1:2,10:20:3.01:186,3,0	0/0:8,10:25:1.97:0,2,23	1/1:35,0:33:61.08:1127,61,0	0/1:16,0:20:37.67:38,0,51	0/1:15,0:15:6.81:665,0,7	./.	1/1:15,1:16:3.88:27,4,0	1/1:5,2:7:6.02:271,6,0	0/1:6,10:16:16.04:202,0,16	1/1:22,1:23:3.01:87,3,0	1/1:11,0:11:2.68:11,3,0	1/1:26,0:23:23.86:588,24,0	1/1:15,0:14:35.26:835,35,0	1/1:15,1:16:37.56:985,38,0	1/1:10,0:10:2.99:25,3,0	1/1:23,2:23:8.99:75,9,0	0/1:9,0:9:47.64:56,0,48	1/1:6,0:5:2.99:24,3,0	0/1:26,0:26:69.04:137,0,69	./.	1/1:10,15:28:68.38:1500,68,0	0/1:17,0:17:3.62:120,0,4	1/1:7,0:6:8.84:131,9,0
chr10	62792398	.	G	GCA	478.34	PASS	AB=0.946;AC=15;AF=0.300;AN=50;BaseQRankSum=2.573;DP=395;FS=4.499;HRun=0;HaplotypeScore=105.3597;InbreedingCoeff=0.1454;MQ=48.13;MQ0=6;MQRankSum=0.026;QD=2.45;ReadPosRankSum=4.757;VQSLOD=1.7165;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:28:1.13:1,0,63	./.	1/1:6,0:2:1.84:5,2,0	0/0:6,0:3:2.91:0,3,17	0/1:12,0:11:16.11:25,0,16	1/1:14,0:14:2.98:22,3,0	0/0:25,0:25:14.85:0,15,127	0/1:27,0:25:99:166,0,122	0/0:17,0:17:17.89:0,18,171	0/0:17,0:17:19.03:0,19,172	0/0:15,0:15:2.98:0,3,21	1/1:15,0:15:1.82:5,2,0	0/0:6,0:6:2.74:0,3,34	0/1:13,0:13:17.47:17,0,37	./.	0/0:9,0:9:5.77:0,6,33	0/1:8,11:18:2.94:43,0,3	1/1:12,0:11:13.12:292,13,0	0/0:14,0:14:13.41:0,13,152	0/0:8,0:8:2.74:0,3,35	0/1:24,0:22:0.68:1,0,44	0/0:5,0:5:12.02:0,12,126	0/0:5,0:5:3:0,3,25	0/0:20,0:20:12.50:0,13,130	./.	0/1:24,0:23:33.94:34,0,84	0/0:15,0:15:10.81:0,11,104	0/0:8,0:7:18.50:0,19,103
chr10	62792400	.	G	GCA	402.13	PASS	AB=0.947;AC=10;AF=0.200;AN=50;BaseQRankSum=2.205;DP=384;FS=2.345;HRun=0;HaplotypeScore=99.1145;InbreedingCoeff=-0.0090;MQ=48.59;MQ0=6;MQRankSum=-2.246;QD=2.98;ReadPosRankSum=5.455;VQSLOD=1.8523;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:3.10:0,3,89	./.	0/0:6,0:2:1.82:0,2,6	0/0:5,0:3:2.48:0,2,9	0/1:12,0:11:11.09:27,0,11	1/1:13,0:13:2.98:22,3,0	0/0:24,0:24:17.83:0,18,150	0/1:25,0:23:22.05:189,0,22	0/0:15,0:15:17.86:0,18,169	0/0:17,0:17:19.79:0,20,188	0/0:12,0:12:2.98:0,3,21	1/1:15,0:15:1.55:4,2,0	0/0:6,0:6:2.71:0,3,32	0/1:12,0:12:17.53:18,0,36	./.	0/0:9,0:9:5.65:0,6,31	0/1:20,2:20:11.71:44,0,12	0/1:9,4:12:16.10:187,0,16	0/0:12,0:12:10.66:0,11,138	0/0:9,0:9:5.73:0,6,59	0/0:26,0:24:2.31:0,2,67	0/0:5,0:5:11.97:0,12,107	0/0:5,0:5:5.93:0,6,40	0/0:20,0:20:12.50:0,13,129	./.	0/1:23,0:22:35.80:36,0,64	0/0:14,0:14:13.03:0,13,110	0/0:8,0:7:18.47:0,18,100
chr10	62792631	.	A	AAAT	22355.72	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-10.977;DP=581;FS=0.000;HRun=0;HaplotypeScore=70.9698;InbreedingCoeff=0.9453;MQ=71.59;MQ0=0;MQRankSum=-4.859;QD=47.77;ReadPosRankSum=2.225;VQSLOD=6.7744;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,141,2133	1/1:1,3:5:6.02:126,6,0	0/0:29,0:26:29.29:0,29,605	0/0:15,0:10:8.13:0,8,92	0/0:19,0:19:54.16:0,54,808	1/1:0,19:19:42.14:882,42,0	1/1:0,21:22:60.21:1256,60,0	1/1:2,21:24:69.18:1235,69,0	1/1:1,2:19:42.13:619,42,0	1/1:1,23:25:63.08:1109,63,0	1/1:0,17:17:41.97:763,42,0	1/1:0,26:27:69.24:1448,69,0	1/1:1,15:17:42.14:853,42,0	1/1:1,12:13:27.09:554,27,0	1/1:2,30:33:78.26:1611,78,0	1/1:2,25:27:66.23:1361,66,0	1/1:6,23:30:60.19:1232,60,0	1/1:0,22:22:51.17:1070,51,0	1/1:3,15:21:60.16:1068,60,0	1/1:1,14:16:42.14:881,42,0	1/1:0,9:10:18.04:326,18,0	1/1:1,7:8:21.07:441,21,0	1/1:2,11:13:27.08:553,27,0	1/1:1,27:28:75.25:1576,75,0	1/1:1,13:15:27.08:566,27,0	1/1:3,20:24:69.18:1271,69,0	1/1:0,21:21:57.20:1178,57,0	1/1:2,9:11:18.05:378,18,0
chr10	62793179	.	TAA	T	3096.68	PASS	AB=0.670;AC=35;AF=0.625;AN=56;BaseQRankSum=0.362;DP=511;FS=4.137;HRun=17;HaplotypeScore=62.4905;InbreedingCoeff=0.6587;MQ=55.05;MQ0=12;MQRankSum=2.652;QD=8.87;ReadPosRankSum=5.458;VQSLOD=0.9497;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:37:38.91:0,39,369	0/0:7,0:6:13.20:0,13,101	0/0:18,0:6:6:0,6,54	0/0:4,0:1:0:0,0,0	0/0:24,0:28:55.55:0,56,489	0/1:7,7:14:23.29:119,0,23	1/1:4,11:15:17.73:142,18,0	0/0:27,0:23:37.74:0,38,320	0/0:2,0:9:9.02:0,9,91	1/1:9,13:24:29.16:272,29,0	1/1:5,13:19:8.01:190,8,0	1/1:6,16:24:32.10:237,32,0	1/1:6,12:17:20.87:165,21,0	1/1:4,9:13:14.68:118,15,0	1/1:5,19:24:44.46:395,44,0	0/1:12,12:25:2.69:161,0,3	0/0:10,0:19:8.96:0,9,84	0/0:5,0:11:8.96:0,9,71	1/1:13,7:20:20.50:160,21,0	1/1:4,8:13:3.82:123,4,0	1/1:5,2:7:5.81:47,6,0	0/1:4,2:7:14.82:15,0,33	1/1:6,7:13:20.60:166,21,0	1/1:6,6:13:8.57:59,9,0	1/1:6,11:19:20.23:191,20,0	1/1:14,14:31:34.49:257,34,0	1/1:8,14:21:35.73:285,36,0	1/1:11,12:22:23.43:189,23,0
chr10	62795094	.	G	GGT	4617.28	PASS	AB=0.556;AC=21;AF=0.375;AN=56;BaseQRankSum=8.855;DP=655;FS=6.119;HRun=0;HaplotypeScore=142.0252;InbreedingCoeff=0.1461;MQ=83.24;MQ0=0;MQRankSum=0.235;QD=11.84;ReadPosRankSum=5.190;VQSLOD=4.0891;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:30:79.96:0,80,1207	0/0:6,0:6:18.05:0,18,267	0/0:20,0:20:40.43:0,40,639	0/0:18,0:18:37.28:0,37,553	0/0:35,0:35:99:0,105,1582	0/1:4,1:21:59.56:165,0,60	0/1:3,0:15:46.12:130,0,46	0/0:35,0:35:99:0,102,1536	0/0:5,0:16:35.08:0,35,192	0/1:7,0:26:83.72:244,0,84	1/1:2,0:18:8.01:217,8,0	0/1:5,0:23:35.45:241,0,35	0/1:4,0:30:25.01:342,0,25	1/1:1,0:25:20.30:305,20,0	0/1:5,0:32:53.11:322,0,53	1/1:2,0:30:32.61:459,33,0	0/0:17,0:17:45.08:0,45,697	0/0:14,0:14:42.13:0,42,650	0/1:3,0:22:21.44:294,0,21	0/1:3,0:26:29.32:316,0,29	0/1:5,0:26:54.13:371,0,54	0/0:25,0:25:75.24:0,75,1183	0/0:26,0:26:78.13:0,78,1222	0/0:23,0:21:69.13:0,69,1005	0/1:4,0:14:61.31:140,0,61	0/1:10,0:34:83.44:416,0,83	1/1:1,1:25:15.81:265,16,0	1/1:0,0:22:46.48:390,46,0
chr10	62795787	.	C	CT	891.92	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-3.603;DP=378;FS=2.421;HRun=10;HaplotypeScore=50.0611;InbreedingCoeff=0.7918;MQ=61.05;MQ0=6;MQRankSum=0.284;QD=16.22;ReadPosRankSum=1.202;VQSLOD=3.8801;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,13:21:30.04:308,30,0	0/0:3,0:4:11.03:0,11,80	0/0:3,0:3:5.99:0,6,49	0/0:4,0:4:2.96:0,3,22	1/1:5,19:23:51.10:532,51,0	0/0:14,0:13:29.96:0,30,246	0/0:7,0:7:17.91:0,18,140	0/0:29,0:27:59.88:0,60,488	1/1:1,9:10:18.05:192,18,0	0/0:16,0:16:32.94:0,33,270	0/0:14,0:14:6.17:0,6,200	0/0:5,0:5:5.98:0,6,49	0/0:10,0:10:14.96:0,15,123	0/0:6,0:6:14.98:0,15,123	0/0:8,0:8:23.90:0,24,190	0/0:13,0:13:32.95:0,33,271	0/0:25,0:25:65.19:0,65,507	0/0:28,0:26:65.84:0,66,533	0/0:17,0:16:32.94:0,33,269	0/0:19,1:20:14.99:0,15,317	0/0:12,0:12:20.96:0,21,170	0/0:10,0:10:23.96:0,24,197	0/0:4,0:4:8.99:0,9,74	0/0:6,0:5:11.97:0,12,95	0/0:12,0:12:32.93:0,33,268	0/0:27,0:26:47.32:0,47,392	0/0:14,0:14:32.94:0,33,271	0/0:15,0:15:32.89:0,33,263
chr10	62795972	.	GC	G	7614.64	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=5.314;DP=401;FS=3.033;HRun=6;HaplotypeScore=72.6328;InbreedingCoeff=0.9081;MQ=62.82;MQ0=19;MQRankSum=-4.361;QD=24.97;ReadPosRankSum=2.947;VQSLOD=5.2327;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:33:81.23:0,81,1046	1/1:1,2:3:6.02:64,6,0	0/0:20,0:13:36.52:0,37,412	0/0:17,0:15:38.29:0,38,462	0/0:20,0:20:57.19:0,57,750	1/1:4,11:14:33.08:355,33,0	1/1:1,8:8:24.06:258,24,0	1/1:7,26:31:75.18:803,75,0	1/1:2,9:11:27.07:289,27,0	1/1:0,18:18:54.14:580,54,0	1/1:2,12:13:27.07:290,27,0	1/1:5,5:8:15.04:161,15,0	1/1:0,11:11:30.08:322,30,0	1/1:1,7:8:21.05:225,21,0	1/1:1,7:7:21.05:225,21,0	1/1:2,9:10:27.07:290,27,0	1/1:1,10:10:30.08:322,30,0	1/1:1,15:15:42.11:451,42,0	1/1:3,9:11:7.13:267,7,0	1/1:5,17:21:36.05:373,36,0	1/1:4,9:10:27.07:290,27,0	1/1:0,9:9:24.06:257,24,0	1/1:0,11:11:21.05:226,21,0	1/1:2,9:9:21.05:226,21,0	1/1:1,15:16:36.09:386,36,0	1/1:3,22:24:69.15:729,69,0	1/1:0,6:6:15.04:161,15,0	1/1:0,2:2:6.02:64,6,0
chr10	62796016	.	CGTTTGTTTTGTTT	C	14840.58	PASS	AB=0.550;AC=45;AF=0.804;AN=56;BaseQRankSum=11.292;DP=484;FS=15.508;HRun=0;HaplotypeScore=181.7801;InbreedingCoeff=0.7532;MQ=56.08;MQ0=0;MQRankSum=-6.257;QD=40.55;ReadPosRankSum=3.472;VQSLOD=3.6675;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:71.60:0,72,4031	1/1:2,4:6:6.02:225,6,0	0/0:29,0:22:47.84:0,48,1333	0/0:18,0:17:22.77:0,23,677	0/0:22,0:22:57.18:0,57,3123	1/1:6,12:18:24.08:823,24,0	0/1:4,18:22:10.75:356,0,11	1/1:16,15:31:42.14:792,42,0	0/0:20,0:20:57.20:0,57,3171	1/1:7,16:23:51.61:1423,52,0	1/1:4,9:13:27.09:673,27,0	1/1:3,12:15:21.07:634,21,0	1/1:5,16:21:24.08:899,24,0	1/1:2,11:13:9.03:261,9,0	1/1:5,11:16:21.07:481,21,0	1/1:8,12:20:36.12:1272,36,0	1/1:6,6:12:6.02:175,6,0	1/1:10,1:11:9:233,9,0	1/1:8,0:7:3.01:36,3,0	1/1:7,15:22:60.20:1621,60,0	1/1:8,0:8:6.02:72,6,0	1/1:3,12:15:30.10:825,30,0	1/1:7,15:22:33.11:821,33,0	1/1:6,9:15:6.02:148,6,0	1/1:5,9:14:24.07:659,24,0	1/1:8,16:23:56.84:1296,57,0	1/1:3,10:13:24.08:823,24,0	1/1:2,2:4:12.04:295,12,0
chr10	62796028	.	T	TG	1350.34	PASS	AB=0.952;AC=15;AF=0.268;AN=56;BaseQRankSum=1.635;DP=458;FS=1.181;HRun=0;HaplotypeScore=126.1738;InbreedingCoeff=-0.3669;MQ=51.76;MQ0=1;MQRankSum=1.581;QD=5.63;ReadPosRankSum=-6.314;VQSLOD=1.7192;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,105,1388	0/0:6,0:6:11.01:0,11,102	0/0:26,0:20:49.75:0,50,742	0/0:15,0:14:34.20:0,34,467	0/0:23,0:23:66.21:0,66,903	0/1:15,0:15:16.11:16,0,144	0/1:21,0:21:5.66:6,0,105	0/1:23,0:23:99:360,0,409	0/0:20,0:20:60.20:0,60,838	0/1:21,0:21:41.83:42,0,289	0/1:12,0:12:39.91:40,0,208	0/0:14,0:14:18.50:0,18,130	0/0:19,0:19:5.78:0,6,124	0/0:13,0:13:11.01:0,11,102	0/0:16,0:16:22.54:0,23,235	0/1:18,0:18:46.11:46,0,191	0/1:10,0:9:30.72:31,0,97	0/1:7,4:11:99:176,0,155	0/1:6,2:6:74.93:75,0,128	0/1:20,0:20:99:193,0,236	0/1:8,4:12:99:181,0,141	0/1:14,0:14:74.52:85,0,75	0/1:20,0:20:7.19:7,0,301	0/1:12,0:12:15.23:15,0,74	0/0:12,0:12:21.51:0,22,172	0/1:23,0:22:99:231,0,323	0/0:12,0:12:23.49:0,23,145	0/0:4,0:4:11.01:0,11,102
chr10	62797279	.	T	TA	2767.42	PASS	AB=0.623;AC=27;AF=0.482;AN=56;BaseQRankSum=-11.294;DP=555;FS=2.016;HRun=13;HaplotypeScore=73.3443;InbreedingCoeff=0.6194;MQ=73.84;MQ0=1;MQRankSum=-0.200;QD=9.92;ReadPosRankSum=-1.739;VQSLOD=2.7778;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:51:75.10:0,75,602	0/0:1,0:7:10.15:0,10,29	0/0:17,0:15:14.20:0,14,79	0/0:11,1:12:11.58:0,12,81	0/0:17,0:17:25.59:0,26,167	1/1:8,12:21:26.83:230,27,0	1/1:5,15:21:20.86:182,21,0	0/0:8,0:29:38.36:0,38,110	0/0:4,0:14:16.25:0,16,47	0/1:15,7:22:4.81:219,0,5	1/1:5,10:15:14.92:122,15,0	1/1:5,13:18:33.04:306,33,0	1/1:4,8:12:6.89:58,7,0	0/1:6,14:20:14.81:139,0,15	1/1:2,20:23:47.84:424,48,0	0/1:5,12:19:0.63:156,0,1	0/0:6,0:28:31.47:0,31,103	0/0:3,0:26:38.42:0,38,112	0/1:9,16:26:9.05:302,0,9	1/1:6,11:18:20.75:164,21,0	1/1:8,8:16:1.88:124,2,0	0/0:9,0:20:19.13:0,19,66	0/0:4,0:17:14.15:0,14,41	0/0:10,0:37:45.98:0,46,167	1/1:6,0:6:5.98:48,6,0	1/1:6,11:17:9.38:207,9,0	0/1:3,8:11:14.22:152,0,14	1/1:4,9:13:15.02:139,15,0
chr10	62797382	.	C	CTT	5107.69	PASS	AB=0.668;AC=47;AF=0.839;AN=56;BaseQRankSum=-2.684;DP=488;FS=8.568;HRun=14;HaplotypeScore=93.1521;InbreedingCoeff=0.4540;MQ=68.37;MQ0=9;MQRankSum=-1.362;QD=11.82;ReadPosRankSum=-0.431;VQSLOD=3.3099;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:19,2:33:34.83:218,0,35	1/1:4,0:8:8.06:115,8,0	0/0:23,0:12:5.41:0,5,81	0/0:24,0:17:12.37:0,12,108	1/1:9,0:22:4.81:91,5,0	1/1:6,10:17:36:418,36,0	1/1:13,6:20:39.30:386,39,0	1/1:28,1:29:39.01:319,39,0	0/0:3,0:7:7.85:0,8,31	1/1:10,8:17:23.42:259,23,0	1/1:11,3:14:29.31:280,29,0	0/1:7,1:13:4.92:102,0,5	1/1:14,1:13:16:89,16,0	1/1:6,1:7:5.04:42,5,0	1/1:8,3:15:17.36:173,17,0	0/1:6,9:14:1.60:204,0,2	1/1:22,1:26:26.70:327,27,0	1/1:12,1:19:32.65:274,33,0	1/1:15,2:16:27.17:293,27,0	1/1:9,7:15:28.21:195,28,0	1/1:6,0:6:0.47:1,0,0	1/1:8,0:11:20.17:195,20,0	1/1:4,1:13:12.03:136,12,0	1/1:9,0:10:8.77:68,9,0	1/1:11,2:16:0.73:125,1,0	1/1:10,12:23:37.82:416,38,0	1/1:3,6:10:8.92:78,9,0	1/1:15,7:22:12.07:303,12,0
chr10	62799317	.	T	TG	4327.04	PASS	AB=0.991;AC=35;AF=0.625;AN=56;BaseQRankSum=13.422;DP=647;FS=9.110;HRun=2;HaplotypeScore=133.7481;InbreedingCoeff=0.1782;MQ=70.83;MQ0=1;MQRankSum=-3.613;QD=9.05;ReadPosRankSum=7.576;VQSLOD=1.6984;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:87.26:0,87,1064	1/1:7,0:7:13.88:69,14,0	0/0:39,0:34:75.32:0,75,769	0/0:32,0:21:40.96:0,41,486	0/0:44,0:44:99:0,129,1581	0/1:22,0:22:39:165,0,39	0/1:14,0:14:14.73:112,0,15	0/1:27,0:27:20.22:150,0,20	0/0:19,0:19:39.08:0,39,455	0/1:18,1:19:32.71:165,0,33	0/1:18,0:17:0.27:140,0,0	1/1:19,0:19:46.79:225,47,0	0/1:17,0:17:57.48:128,0,57	1/1:17,0:17:0.82:159,1,0	1/1:34,0:34:29.86:280,30,0	1/1:23,0:23:3.95:185,4,0	1/1:14,1:15:19.76:201,20,0	1/1:22,0:22:12.75:242,13,0	0/1:20,0:19:1.30:144,0,1	0/1:20,1:20:8.01:170,0,8	0/1:16,0:16:14.52:111,0,15	0/1:25,0:25:26.55:177,0,27	1/1:16,0:16:21.74:161,22,0	1/1:25,0:25:63.97:298,64,0	1/1:20,1:21:25.13:235,25,0	1/1:31,0:31:72.34:356,72,0	1/1:26,0:26:23.70:289,24,0	0/1:23,0:23:53.59:166,0,54
chr10	62799319	.	G	GT	15232.74	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-1.474;DP=683;FS=1.671;HRun=6;HaplotypeScore=113.9210;InbreedingCoeff=0.9980;MQ=67.35;MQ0=1;MQRankSum=-3.035;QD=29.64;ReadPosRankSum=2.185;VQSLOD=4.3122;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:87.17:0,87,877	1/1:0,7:7:18.02:208,18,0	0/0:40,0:32:46.74:0,47,577	0/0:34,0:20:39.74:0,40,409	0/0:45,0:45:99:0,126,1277	1/1:4,18:22:51.15:641,51,0	1/1:4,13:17:33.58:416,34,0	1/1:6,24:30:72.20:876,72,0	0/0:18,0:18:36.08:0,36,367	1/1:5,15:20:51.16:639,51,0	1/1:3,17:19:48.11:586,48,0	1/1:0,17:17:51.16:640,51,0	1/1:6,13:18:39.09:473,39,0	1/1:4,15:18:45.08:542,45,0	1/1:6,31:37:86.97:1081,87,0	1/1:8,20:28:60.15:736,60,0	1/1:6,12:18:45.40:536,45,0	1/1:4,18:23:59.66:708,60,0	1/1:2,17:18:48.10:582,48,0	1/1:6,17:22:45.14:558,45,0	1/1:6,12:17:45.05:517,45,0	1/1:2,23:25:60.15:736,60,0	1/1:1,16:16:42.13:528,42,0	1/1:2,26:28:69.22:868,69,0	1/1:4,18:22:60.11:716,60,0	1/1:2,29:31:89.30:1085,89,0	1/1:5,23:28:72.19:881,72,0	1/1:8,18:26:54.17:679,54,0
chr10	62799349	.	G	GT	2544.74	PASS	AB=0.884;AC=28;AF=0.500;AN=56;BaseQRankSum=3.685;DP=646;FS=0.410;HRun=11;HaplotypeScore=151.6138;InbreedingCoeff=0.0518;MQ=56.37;MQ0=11;MQRankSum=-3.547;QD=5.65;ReadPosRankSum=-1.593;VQSLOD=0.6639;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,1:29:45.34:0,45,513	1/1:5,0:5:2.78:8,3,0	0/0:44,0:17:14.90:0,15,88	0/1:44,0:15:8.74:9,0,38	0/0:43,1:44:43.61:0,44,649	0/1:18,1:21:3.25:151,0,3	1/1:10,6:15:18.92:182,19,0	1/1:28,0:28:9.50:33,9,0	0/0:18,0:18:17.37:0,17,49	0/1:12,4:17:3.49:185,0,3	0/1:12,2:14:10.45:108,0,10	1/1:12,1:15:11.68:141,12,0	1/1:15,1:15:7.38:140,7,0	0/1:19,2:21:3.15:193,0,3	0/1:25,3:29:24.18:186,0,24	0/1:15,11:26:42.92:204,0,43	0/1:13,0:13:0.43:0,0,5	0/0:25,0:25:5.92:0,6,52	0/1:19,3:20:24.79:103,0,25	0/1:11,3:13:21.74:122,0,22	0/1:15,0:12:11.09:49,0,11	0/0:15,0:14:21.98:0,22,112	0/0:18,0:17:7.16:0,7,105	0/1:29,0:29:12.09:12,0,153	0/1:12,3:15:25.50:74,0,26	1/1:24,9:35:26.18:376,26,0	1/1:27,5:35:11.55:357,12,0	0/1:13,0:14:35.66:84,0,36
chr10	62799355	.	TTTTTTG	T	618.87	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=-4.392;DP=635;FS=0.000;HRun=0;HaplotypeScore=203.1260;InbreedingCoeff=0.1019;MQ=56.03;MQ0=12;MQRankSum=-1.124;QD=4.39;ReadPosRankSum=-5.052;VQSLOD=0.6183;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:30:82.03:0,82,2151	0/1:6,0:6:7.28:7,0,64	0/0:41,0:15:22.70:0,23,424	0/0:41,0:14:27.31:0,27,221	0/0:43,0:43:99:0,124,2886	0/0:22,0:22:17.15:0,17,515	0/1:15,0:14:0.34:0,0,308	0/1:29,0:29:91.88:92,0,156	1/1:0,19:19:27.09:552,27,0	0/0:18,0:18:28.56:0,29,410	0/0:10,0:10:24.91:0,25,305	0/0:14,0:14:19.83:0,20,271	0/0:14,0:13:35.98:0,36,521	0/0:22,0:21:21.71:0,22,465	0/0:32,0:32:32.32:0,32,677	0/0:25,0:25:52.45:0,52,810	0/1:16,0:16:34.85:35,0,131	0/1:24,0:24:38.84:39,0,255	0/0:23,0:21:32.31:0,32,325	0/0:14,0:13:35.11:0,35,450	0/0:15,0:12:15.20:0,15,132	0/1:16,0:15:14.81:15,0,431	0/0:17,0:16:32.79:0,33,399	0/0:27,0:26:14.60:0,15,705	0/0:14,0:13:29.67:0,30,398	0/0:37,0:37:48.09:0,48,910	0/0:34,0:33:73.73:0,74,1106	0/1:16,0:15:17.35:17,0,451
chr10	62799359	.	TTG	T	4075.95	PASS	AB=0.993;AC=37;AF=0.661;AN=56;BaseQRankSum=-0.633;DP=640;FS=0.000;HRun=0;HaplotypeScore=149.8777;InbreedingCoeff=0.1444;MQ=56.99;MQ0=11;MQRankSum=3.162;QD=8.35;ReadPosRankSum=-7.026;VQSLOD=1.1899;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:30:86.73:0,87,1160	1/1:6,1:7:14.89:124,15,0	0/0:41,0:14:19.14:0,19,258	0/0:35,0:13:17.02:0,17,81	0/0:43,0:43:89.83:0,90,1441	1/1:23,1:24:19.96:262,20,0	1/1:14,0:13:10.24:91,10,0	1/1:29,1:30:76.69:675,77,0	1/1:19,0:19:26.62:219,27,0	0/1:19,0:19:0.61:175,0,1	1/1:9,0:9:5.17:47,5,0	1/1:12,2:14:5.64:218,6,0	0/1:16,0:15:38.13:61,0,38	0/1:24,0:23:32.60:137,0,33	0/1:30,1:31:0.58:246,0,1	0/1:26,0:26:53.38:117,0,53	1/1:15,0:15:26.61:186,27,0	1/1:24,0:24:16.06:269,16,0	0/1:21,1:20:4.58:163,0,5	0/1:15,0:14:41.60:48,0,42	1/1:18,0:15:2.29:97,2,0	0/1:15,0:14:0.97:101,0,1	1/1:17,1:17:5.48:118,5,0	1/1:25,2:26:17.56:117,18,0	0/1:16,0:15:20.19:105,0,20	1/1:36,1:37:16.26:284,16,0	0/1:32,0:31:37.42:125,0,37	0/1:16,0:15:21.21:93,0,21
chr10	62799360	.	TG	T	7272.37	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=5.505;DP=637;FS=0.895;HRun=1;HaplotypeScore=130.2844;InbreedingCoeff=0.9739;MQ=57.14;MQ0=11;MQRankSum=-1.728;QD=14.84;ReadPosRankSum=-2.705;VQSLOD=3.7334;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:30:80.38:0,80,887	1/1:2,5:7:14.66:159,15,0	0/0:34,3:13:22.24:0,22,217	0/0:37,0:12:9.61:0,10,66	0/0:42,0:42:80.47:0,80,1127	1/1:23,1:24:51.29:347,51,0	1/1:14,0:13:32.36:224,32,0	1/1:11,21:32:84.14:971,84,0	1/1:19,0:19:25.38:141,25,0	1/1:18,1:19:34.30:267,34,0	1/1:9,0:9:17.92:105,18,0	1/1:13,1:14:35.76:252,36,0	1/1:16,0:15:26.42:162,26,0	1/1:22,2:23:47.53:295,48,0	1/1:30,1:31:66.78:502,67,0	1/1:27,0:27:43.02:281,43,0	1/1:0,15:15:27.05:344,27,0	1/1:6,18:24:34.04:456,34,0	1/1:21,1:20:38.87:287,39,0	1/1:13,1:14:21.62:150,22,0	1/1:18,0:15:21.95:173,22,0	1/1:14,1:14:31.89:227,32,0	1/1:18,0:17:37.91:209,38,0	1/1:27,0:26:53.43:296,53,0	1/1:15,1:15:31.12:217,31,0	1/1:38,0:38:93.78:678,94,0	1/1:29,2:30:52.91:348,53,0	1/1:16,0:15:29.85:184,30,0
chr10	62799664	.	CT	C	702.94	PASS	AB=0.945;AC=12;AF=0.214;AN=56;BaseQRankSum=-6.508;DP=463;FS=4.167;HRun=13;HaplotypeScore=142.2256;InbreedingCoeff=0.1095;MQ=61.10;MQ0=7;MQRankSum=4.077;QD=4.02;ReadPosRankSum=6.044;VQSLOD=0.9376;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:11,16:27:47.03:377,47,0	0/1:3,0:3:4.94:13,0,5	0/1:33,0:14:14.14:14,0,49	0/1:15,1:8:2.78:3,0,22	0/1:11,16:29:14.97:339,0,15	0/0:11,0:10:7.23:0,7,30	0/1:10,0:10:0.23:0,0,20	0/1:24,0:27:30.04:30,0,57	1/1:4,0:9:11.31:33,11,0	0/0:18,0:17:22.32:0,22,110	0/0:15,0:14:6.65:0,7,48	0/0:14,0:12:7:0,7,54	0/0:15,0:13:3.59:0,4,22	0/0:13,0:13:14.97:0,15,78	0/0:21,0:21:14.27:0,14,87	0/0:13,0:12:18.50:0,18,109	0/0:20,1:22:3.12:0,3,80	0/1:12,0:9:5.92:6,0,50	0/0:19,0:19:8.51:0,9,33	0/0:19,0:19:12.78:0,13,75	0/0:4,0:3:2.97:0,3,20	0/1:7,0:9:17.46:32,0,17	0/0:13,0:17:2.83:0,3,76	0/0:9,0:9:12.07:0,12,72	0/0:23,0:20:3.12:0,3,51	0/0:24,1:25:14.90:0,15,89	0/0:17,0:14:18.13:0,18,91	0/0:7,0:6:15.25:0,15,95
chr10	62799674	.	TTTTG	T	1554.74	PASS	AB=0.985;AC=21;AF=0.375;AN=56;BaseQRankSum=-4.771;DP=484;FS=5.581;HRun=0;HaplotypeScore=140.0328;InbreedingCoeff=-0.4270;MQ=51.61;MQ0=11;MQRankSum=-1.227;QD=4.74;ReadPosRankSum=-4.525;VQSLOD=0.4227;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:45.56:0,46,710	0/1:5,0:4:4.09:4,0,54	0/0:31,0:10:3.65:0,4,91	0/1:20,0:8:3.80:4,0,21	0/0:27,0:27:77.81:0,78,835	0/1:11,0:10:33.20:86,0,33	0/1:12,1:13:14.90:115,0,15	0/1:23,0:23:24.05:37,0,24	1/1:13,0:12:19.41:217,19,0	0/1:21,1:19:52.17:52,0,116	0/1:15,0:14:18.09:113,0,18	0/1:16,0:13:20.26:90,0,20	0/1:13,1:12:82.88:124,0,83	0/1:13,0:13:46.75:47,0,112	0/1:18,1:19:99:123,0,123	0/1:11,0:10:8.08:8,0,128	0/0:24,0:22:15.79:0,16,158	0/1:11,0:8:3.84:4,0,60	0/1:22,0:20:20.30:130,0,20	0/1:18,1:18:99:108,0,103	0/0:3,0:2:1.78:0,2,31	0/0:12,0:11:11.04:0,11,42	0/0:22,0:20:31.14:0,31,246	0/1:13,0:13:7.07:7,0,21	0/1:24,0:20:47.71:206,0,48	0/1:26,0:24:99:221,0,106	0/1:18,0:14:15.36:15,0,105	0/0:8,0:6:8.58:0,9,59
chr10	62799675	.	TTTG	T	1961.96	PASS	AB=0.979;AC=31;AF=0.554;AN=56;BaseQRankSum=-3.391;DP=482;FS=13.638;HRun=0;HaplotypeScore=130.6717;InbreedingCoeff=-0.1809;MQ=51.35;MQ0=12;MQRankSum=-2.781;QD=5.10;ReadPosRankSum=-4.127;VQSLOD=0.4838;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:44.55:0,45,485	0/1:5,0:4:15.08:15,0,23	0/0:31,0:9:2.65:0,3,77	0/1:20,0:7:2.58:3,0,7	0/0:26,0:26:74.15:0,74,581	1/1:10,1:10:1.35:116,1,0	1/1:12,1:13:1.76:155,2,0	1/1:23,0:23:25.81:139,26,0	1/1:13,0:12:19.59:172,20,0	0/1:22,0:19:57.51:78,0,58	1/1:15,1:14:15.85:121,16,0	0/1:16,0:13:3.75:96,0,4	0/1:13,1:12:27.69:120,0,28	0/1:12,1:13:54.09:58,0,54	0/1:17,1:18:60.46:115,0,60	0/1:11,0:10:12.68:13,0,76	0/1:24,0:22:11.64:12,0,44	0/1:11,0:8:18.79:19,0,41	1/1:18,3:19:0.45:196,0,0	0/1:18,1:18:45.46:181,0,45	0/0:3,0:2:1.40:0,1,15	1/1:12,0:11:1.91:7,2,0	0/1:22,0:20:3.81:4,0,85	1/1:13,0:13:2.58:19,3,0	0/1:23,1:20:3.71:196,0,4	0/1:25,1:24:15.79:256,0,16	0/1:18,0:14:24.37:24,0,54	0/0:8,0:6:6.66:0,7,27
chr10	62799676	.	TTG	T	2902.43	PASS	AB=0.992;AC=41;AF=0.732;AN=56;BaseQRankSum=-0.741;DP=478;FS=5.759;HRun=0;HaplotypeScore=119.9295;InbreedingCoeff=0.1634;MQ=48.58;MQ0=13;MQRankSum=-3.008;QD=6.91;ReadPosRankSum=-3.251;VQSLOD=2.5233;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:27:27.75:0,28,263	1/1:5,0:4:0.33:31,0,0	0/1:30,0:8:8.71:9,0,64	0/1:19,0:6:0.14:6,0,0	0/0:27,0:27:50.83:0,51,353	1/1:11,0:10:18.89:147,19,0	1/1:13,1:13:10.20:197,10,0	1/1:24,0:24:43.73:264,44,0	1/1:12,0:11:20.12:147,20,0	0/1:22,0:19:12.79:111,0,13	1/1:16,0:14:30.81:190,31,0	1/1:16,0:13:1.02:94,1,0	1/1:13,1:12:4.59:155,5,0	0/1:12,1:13:8.23:50,0,8	0/1:18,0:18:1.48:121,0,1	0/1:11,0:10:12.24:12,0,19	1/1:24,0:22:13.32:106,13,0	0/1:11,0:8:39.58:54,0,40	1/1:21,0:19:27.58:250,28,0	1/1:19,0:18:4.32:182,4,0	0/0:2,1:2:1.13:0,1,6	1/1:9,1:9:13.67:75,14,0	1/1:23,0:21:8.90:106,9,0	1/1:13,0:13:11.70:61,12,0	1/1:23,1:20:27.48:274,27,0	1/1:24,0:22:46.88:362,47,0	0/1:18,0:14:6.80:47,0,7	0/1:8,0:6:4.33:4,0,5
chr10	62799677	.	TG	T	4012.60	PASS	AB=0.912;AC=51;AF=0.911;AN=56;BaseQRankSum=4.699;DP=472;FS=2.321;HRun=1;HaplotypeScore=110.0237;InbreedingCoeff=0.0516;MQ=48.62;MQ0=13;MQRankSum=-6.494;QD=8.50;ReadPosRankSum=-0.087;VQSLOD=0.9324;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:29:13.61:14,0,153	1/1:3,2:4:11.36:83,11,0	0/1:29,2:8:21.15:21,0,50	0/1:17,2:6:4.57:5,0,7	0/1:25,2:27:9:9,0,161	1/1:10,1:10:23.16:152,23,0	1/1:13,0:12:19.44:183,19,0	1/1:20,5:25:42.77:336,43,0	1/1:12,0:11:20.12:123,20,0	1/1:22,0:19:16.71:167,17,0	1/1:15,0:13:32.23:248,32,0	1/1:16,0:13:13.88:117,14,0	1/1:14,0:12:24.91:175,25,0	1/1:13,0:13:22.58:118,23,0	1/1:17,0:17:26.03:149,26,0	1/1:11,0:10:6.38:41,6,0	1/1:22,1:21:32.81:240,33,0	0/1:8,3:8:19.66:70,0,20	1/1:21,0:19:46.95:303,47,0	1/1:19,0:18:31.72:266,32,0	1/1:3,0:2:2.13:6,2,0	1/1:9,0:8:14.40:137,14,0	1/1:19,4:21:25.07:220,25,0	1/1:12,0:12:9.87:46,10,0	1/1:24,0:20:42.77:273,43,0	1/1:24,0:22:56.89:380,57,0	1/1:17,0:13:23.18:101,23,0	1/1:5,0:3:6.34:30,6,0
chr10	62799680	.	T	TTG	1069.12	PASS	AB=0.975;AC=22;AF=0.393;AN=56;BaseQRankSum=3.359;DP=491;FS=65.836;HRun=0;HaplotypeScore=140.1275;InbreedingCoeff=-0.2221;MQ=47.67;MQ0=16;MQRankSum=-7.911;QD=3.73;ReadPosRankSum=-0.567;VQSLOD=0.1042;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:75.03:0,75,1088	0/1:6,0:5:11:11,0,53	0/0:30,0:8:14.58:0,15,129	0/0:21,0:6:4.27:0,4,21	0/0:29,0:29:84.27:0,84,1222	1/1:10,0:11:3.45:118,3,0	0/0:13,0:11:8.48:0,8,63	0/1:28,0:28:42.47:71,0,42	0/0:13,0:12:0.06:0,0,11	0/1:21,2:20:86.24:98,0,86	0/1:16,0:14:16.72:17,0,67	0/1:16,1:14:45.83:46,0,84	0/1:15,0:13:3.80:4,0,61	0/1:13,0:13:16.56:60,0,17	1/1:19,0:19:0.48:143,0,0	0/1:11,0:10:22.61:27,0,23	0/0:25,0:23:12.14:0,12,162	0/0:11,0:8:6.05:0,6,65	0/1:21,0:19:53.75:100,0,54	0/1:17,0:18:38.55:39,0,103	1/1:4,0:3:1.34:8,1,0	0/0:9,0:8:2.44:0,2,25	0/0:24,0:22:3.41:0,3,134	0/1:12,0:12:3.90:4,0,24	0/1:22,1:20:41.71:145,0,42	0/1:24,0:23:75.71:165,0,76	1/1:17,0:13:0.51:115,1,0	0/1:5,0:3:0.60:46,0,1
chr10	62799695	.	GTT	G	238.25	PASS	AB=0.959;AC=17;AF=0.304;AN=56;BaseQRankSum=1.715;DP=488;FS=1.151;HRun=8;HaplotypeScore=136.0076;InbreedingCoeff=-0.3351;MQ=38.20;MQ0=28;MQRankSum=-6.271;QD=0.86;ReadPosRankSum=-3.704;VQSLOD=-0.6356;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:63.14:0,63,965	0/0:9,0:8:18.23:0,18,133	0/0:25,0:3:1.25:0,1,3	0/1:22,0:3:12.69:13,0,19	0/0:28,0:28:74.51:0,75,1153	0/1:10,2:11:11.41:45,0,11	0/1:10,0:8:11.64:12,0,22	0/0:24,0:23:19.68:0,20,167	0/0:15,0:14:20.24:0,20,182	0/1:19,1:17:55.36:55,0,111	0/1:15,1:14:4.81:5,0,24	0/0:15,1:13:5.78:0,6,30	0/0:13,0:11:1.49:0,1,67	0/0:13,0:13:15.76:0,16,110	0/0:19,0:19:0.05:0,0,45	0/1:12,1:12:0.54:1,0,64	0/1:25,0:23:9.22:9,0,69	0/1:14,0:9:20.65:21,0,54	0/1:19,0:18:15.62:18,0,16	0/1:14,1:14:39.18:39,0,44	1/1:3,0:3:0.07:12,0,0	0/1:12,0:11:16.45:16,0,40	0/1:28,0:25:37.66:38,0,158	0/0:11,0:10:5.51:0,6,46	0/1:23,0:20:9.61:10,0,35	0/1:26,0:23:35.57:36,0,58	0/1:13,3:13:51.23:51,0,63	0/0:6,0:5:3.66:0,4,76
chr10	62799698	.	T	TTTTG	4105.61	PASS	AB=0.900;AC=26;AF=0.464;AN=56;BaseQRankSum=2.165;DP=491;FS=14.787;HRun=0;HaplotypeScore=141.3413;InbreedingCoeff=0.2243;MQ=34.22;MQ0=34;MQRankSum=-5.064;QD=14.11;ReadPosRankSum=2.642;VQSLOD=2.7556;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:31:63.14:0,63,1039	0/0:9,0:8:23.98:0,24,254	0/0:21,0:2:1.25:0,1,3	0/1:22,0:2:8.57:9,0,23	0/0:32,0:31:75.23:0,75,1275	0/1:10,1:10:10.47:139,0,10	1/1:10,0:8:6.57:154,7,0	0/0:25,0:24:35.80:0,36,333	0/0:15,0:13:25.61:0,26,246	0/1:17,3:17:59.53:237,0,60	0/1:14,3:15:20.78:293,0,21	0/1:15,1:12:28.56:124,0,29	1/1:10,2:12:6.41:259,6,0	0/1:12,1:13:6.50:138,0,7	1/1:16,3:20:6.14:512,6,0	1/1:9,3:13:15.07:234,15,0	0/1:26,0:22:20.82:21,0,166	0/0:14,0:9:26.76:0,27,283	1/1:18,0:16:1.20:210,1,0	0/1:12,3:14:30.22:287,0,30	1/1:2,1:3:6.41:94,6,0	0/0:12,0:11:23.24:0,23,209	0/0:30,0:25:43.75:0,44,444	0/0:10,0:9:10.85:0,11,119	0/1:17,5:19:0.77:442,0,1	1/1:25,1:22:23.51:581,24,0	0/1:14,3:14:29.32:233,0,29	1/1:6,1:6:12.47:140,12,0
chr10	62799702	.	TTG	T	2786	PASS	AB=0.980;AC=44;AF=0.815;AN=54;BaseQRankSum=4.439;DP=470;FS=4.915;HRun=0;HaplotypeScore=122.9652;InbreedingCoeff=0.1214;MQ=31.59;MQ0=38;MQRankSum=-5.104;QD=7.18;ReadPosRankSum=-3.643;VQSLOD=2.3942;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:32:57.01:0,57,821	1/1:9,0:8:0.65:70,1,0	./.	0/1:22,0:2:23:23,0,24	0/0:31,0:30:44.67:0,45,936	1/1:11,1:11:5.87:98,6,0	1/1:11,0:8:7.75:121,8,0	1/1:21,0:20:22.76:197,23,0	0/1:14,0:12:32.32:47,0,32	0/1:17,1:15:50.70:116,0,51	1/1:16,0:14:28.34:199,28,0	1/1:15,0:11:9.71:45,10,0	1/1:12,1:11:3.91:96,4,0	0/1:14,0:12:9.03:31,0,9	1/1:19,0:19:17.83:178,18,0	1/1:15,0:14:2.54:61,3,0	1/1:24,1:21:9.18:102,9,0	1/1:12,2:9:22.50:183,22,0	1/1:11,1:11:18.36:157,18,0	0/1:13,1:13:4.42:98,0,4	1/1:3,0:3:3.50:38,3,0	1/1:11,1:11:18.87:142,19,0	1/1:27,2:24:18.91:266,19,0	1/1:10,0:9:4.14:39,4,0	1/1:20,0:17:24:197,24,0	1/1:25,1:22:10.21:302,10,0	0/1:17,0:14:12.25:68,0,12	1/1:7,0:6:1.20:61,1,0
chr10	62799703	.	TG	T	4130.62	PASS	AB=1.000;AC=48;AF=0.889;AN=54;BaseQRankSum=6.866;DP=460;FS=6.776;HRun=1;HaplotypeScore=110.2849;InbreedingCoeff=0.6034;MQ=31.41;MQ0=39;MQRankSum=-6.326;QD=10.87;ReadPosRankSum=-2.777;VQSLOD=0.5367;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:31:56.93:0,57,630	1/1:6,3:8:19.51:218,20,0	./.	0/1:22,0:2:5.02:5,0,16	0/0:30,0:29:44.20:0,44,699	1/1:12,0:11:11.83:126,12,0	1/1:11,0:8:16.18:117,16,0	1/1:12,6:17:38.66:284,39,0	1/1:13,1:12:7.88:136,8,0	0/1:18,0:15:7.45:143,0,7	1/1:16,0:14:32.39:223,32,0	1/1:14,1:11:11.95:61,12,0	1/1:13,0:11:23.46:134,23,0	1/1:14,0:12:19.15:103,19,0	1/1:19,0:19:34.63:225,35,0	1/1:15,0:14:18.82:125,19,0	1/1:21,2:19:15.60:175,16,0	1/1:12,2:9:25.26:255,25,0	1/1:12,0:11:25.89:194,26,0	1/1:14,0:13:12.86:128,13,0	1/1:3,0:3:5.42:35,5,0	1/1:6,5:10:20.98:206,21,0	1/1:23,6:23:47.45:360,47,0	1/1:5,3:7:11.48:96,11,0	1/1:20,0:17:35.81:224,36,0	1/1:26,0:22:43.31:344,43,0	1/1:17,0:14:13.09:115,13,0	1/1:7,0:6:16.14:99,16,0
chr10	62799717	.	C	CT	2599.41	PASS	AB=1.000;AC=42;AF=0.808;AN=52;BaseQRankSum=3.948;DP=462;FS=3.298;HRun=8;HaplotypeScore=107.6105;InbreedingCoeff=0.4488;MQ=30.72;MQ0=55;MQRankSum=-6.489;QD=7.45;ReadPosRankSum=-1.241;VQSLOD=1.2797;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:32:41.97:0,42,378	1/1:5,8:11:12.03:133,12,0	./.	./.	0/0:35,0:34:50.87:0,51,453	1/1:10,0:10:18.28:130,18,0	0/1:10,0:7:8.05:59,0,8	1/1:7,12:17:36.11:415,36,0	0/0:13,0:11:11.96:0,12,109	1/1:15,0:13:16.97:158,17,0	1/1:12,0:10:8.98:73,9,0	0/1:10,0:7:13.22:18,0,13	1/1:14,0:14:17.92:138,18,0	0/1:20,0:16:8.35:102,0,8	1/1:16,0:16:2.44:179,2,0	1/1:13,0:11:11.93:89,12,0	1/1:18,6:16:8.05:75,8,0	1/1:15,3:12:9.03:102,9,0	1/1:12,0:11:14.91:109,15,0	1/1:16,0:13:1.73:122,2,0	0/1:7,0:5:0:0,0,0	1/1:10,7:14:12.04:139,12,0	1/1:20,7:21:11.02:95,11,0	1/1:4,4:6:6.02:66,6,0	1/1:19,0:16:11.96:94,12,0	1/1:27,0:22:32.56:248,33,0	1/1:14,0:9:17.95:145,18,0	1/1:7,0:6:8.90:61,9,0
chr10	62799725	.	T	TC	3826.03	PASS	AB=0.948;AC=39;AF=0.750;AN=52;BaseQRankSum=4.481;DP=395;FS=2.016;HRun=1;HaplotypeScore=75.4571;InbreedingCoeff=0.3154;MQ=35.12;MQ0=54;MQRankSum=-7.152;QD=13.10;ReadPosRankSum=1.298;VQSLOD=2.6437;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:33:54.09:0,54,623	1/1:10,0:8:11.07:52,11,0	./.	./.	0/0:31,0:30:51.12:0,51,635	1/1:1,10:12:18.03:232,18,0	1/1:6,4:7:11.99:145,12,0	0/1:16,0:14:1.73:124,0,2	0/0:14,0:12:23.67:0,24,244	1/1:3,12:13:8.08:278,8,0	1/1:2,8:9:14.90:161,15,0	1/1:4,6:10:5.98:62,6,0	1/1:4,10:14:18.06:253,18,0	0/1:6,8:10:20.16:192,0,20	1/1:5,10:15:23.80:416,24,0	1/1:2,12:13:12.04:169,12,0	0/1:20,0:12:3.79:4,0,57	0/1:17,0:11:5.60:27,0,6	1/1:2,9:10:26.99:302,27,0	1/1:4,9:11:20.86:266,21,0	0/1:7,0:5:15.98:19,0,16	1/1:12,0:10:11.50:59,12,0	0/1:16,0:10:17.79:24,0,18	0/1:9,0:7:18.32:18,0,31	1/1:2,8:9:14.98:186,15,0	1/1:3,15:15:36.02:458,36,0	1/1:3,11:10:18.06:251,18,0	1/1:2,3:5:9.03:127,9,0
chr10	62800656	.	A	AT	14576.50	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-5.955;DP=508;FS=8.514;HRun=4;HaplotypeScore=65.7249;InbreedingCoeff=0.9961;MQ=81.22;MQ0=0;MQRankSum=-1.951;QD=35.64;ReadPosRankSum=2.123;VQSLOD=5.1251;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:72.09:0,72,769	1/1:1,10:11:27.09:369,27,0	0/0:16,0:15:27.07:0,27,422	0/0:18,0:16:38.69:0,39,413	0/0:21,0:21:60.17:0,60,680	1/1:3,8:11:27.01:328,27,0	1/1:0,13:13:36.12:492,36,0	1/1:2,35:37:99:1351,102,0	0/0:16,0:16:45.09:0,45,496	1/1:0,15:15:45.15:615,45,0	1/1:2,17:19:48.12:635,48,0	1/1:1,19:20:54.18:735,54,0	1/1:0,7:7:21.07:287,21,0	1/1:0,14:14:39.13:533,39,0	1/1:3,13:16:36.12:492,36,0	1/1:2,13:15:42.11:552,42,0	1/1:2,20:22:45.15:615,45,0	1/1:2,15:17:42.13:562,42,0	1/1:0,24:24:72.23:969,72,0	1/1:3,20:23:63.21:853,63,0	1/1:1,6:7:18.02:225,18,0	1/1:0,18:18:51.17:697,51,0	1/1:3,19:22:54.18:738,54,0	1/1:1,17:18:39.13:533,39,0	1/1:2,23:25:63.21:861,63,0	1/1:2,23:25:69.23:943,69,0	1/1:1,20:20:60.20:820,60,0	1/1:0,9:9:27.09:370,27,0
chr10	62801420	.	A	AT	4574.15	PASS	AB=0.653;AC=34;AF=0.630;AN=54;BaseQRankSum=-10.840;DP=423;FS=0.490;HRun=12;HaplotypeScore=47.9148;InbreedingCoeff=0.7297;MQ=53.69;MQ0=5;MQRankSum=2.807;QD=16.16;ReadPosRankSum=0.526;VQSLOD=5.6054;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,17:18:42.07:409,42,0	0/0:3,0:13:18.32:0,18,53	0/0:15,0:5:8.59:0,9,56	./.	1/1:9,11:20:26.83:238,27,0	1/1:2,16:18:45.01:426,45,0	1/1:3,10:13:14.06:181,14,0	0/0:11,0:28:35.68:0,36,105	0/0:3,0:12:14.24:0,14,41	1/1:7,16:22:42.07:409,42,0	1/1:2,10:15:32.56:276,33,0	0/1:5,5:9:31.78:46,0,32	1/1:2,3:5:6.01:58,6,0	1/1:2,9:11:29.08:268,29,0	1/1:5,13:18:24.04:233,24,0	1/1:6,10:17:23.87:219,24,0	0/0:4,0:22:32.58:0,33,94	0/0:3,0:16:23.96:0,24,69	1/1:6,15:21:25.91:385,26,0	1/1:4,12:16:30:281,30,0	1/1:2,3:5:9.01:88,9,0	0/0:1,0:6:4.06:0,4,12	0/0:4,0:7:5.01:0,5,28	0/0:4,0:13:4.39:0,4,29	1/1:3,8:10:15.02:146,15,0	0/1:7,9:15:35.68:174,0,36	1/1:6,16:22:20.16:358,20,0	1/1:2,17:19:39.06:379,39,0
chr10	62802574	.	C	CACATACATACAT	20400.54	PASS	AB=0.732;AC=33;AF=0.589;AN=56;BaseQRankSum=-7.214;DP=899;FS=12.275;HRun=0;HaplotypeScore=299.7331;InbreedingCoeff=0.9107;MQ=52.12;MQ0=13;MQRankSum=-11.970;QD=36.49;ReadPosRankSum=-5.128;VQSLOD=2.2952;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:32.73:0,33,2506	0/0:15,0:15:33.10:0,33,1034	0/0:44,0:21:23.95:0,24,438	0/0:35,0:24:21.07:0,21,522	0/0:22,0:23:48.15:0,48,1318	1/1:18,9:28:24.08:1395,24,0	1/1:10,10:21:3.01:123,3,0	0/0:35,0:35:54.18:0,54,1280	1/1:15,18:34:21.07:1197,21,0	1/1:23,23:48:96.21:3666,96,0	1/1:7,10:17:6.02:352,6,0	1/1:21,22:44:30.10:1692,30,0	1/1:19,13:36:24.08:1097,24,0	1/1:16,22:41:22.32:1296,22,0	1/1:21,28:52:27.09:1584,27,0	1/1:19,26:48:14.94:781,15,0	0/0:21,0:21:39.13:0,39,1256	0/0:21,0:21:29.26:0,29,1554	1/1:13,7:23:36.12:1253,36,0	1/1:10,14:24:9.03:528,9,0	0/1:19,10:30:0:0,0,0	0/0:28,0:28:57.18:0,57,1740	0/0:39,0:40:81.26:0,81,2641	0/0:29,0:29:57.17:0,57,1746	1/1:12,11:26:9.03:429,9,0	1/1:14,16:33:54.06:1984,54,0	1/1:21,17:38:45.15:2513,45,0	1/1:5,3:9:12.04:513,12,0
chr10	62803203	.	GAA	G	5597.77	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=13.304;DP=616;FS=0.762;HRun=4;HaplotypeScore=75.1378;InbreedingCoeff=0.9893;MQ=71.43;MQ0=3;MQRankSum=-2.212;QD=38.61;ReadPosRankSum=2.542;VQSLOD=4.2577;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,105,1918	1/1:0,4:4:9.03:138,9,0	0/0:22,0:20:53.18:0,53,892	0/0:14,0:13:32.93:0,33,514	0/0:34,0:34:96.26:0,96,1671	0/0:13,0:13:39.12:0,39,719	0/0:17,0:17:51.16:0,51,908	1/1:2,25:27:75.22:1086,75,0	0/0:18,0:18:54.16:0,54,956	0/0:29,0:29:81.26:0,81,1496	0/0:15,0:15:45.15:0,45,839	0/0:14,0:14:39.13:0,39,740	0/0:19,0:19:57.16:0,57,997	0/0:24,0:24:66.20:0,66,1179	0/0:21,0:21:60.21:0,60,1153	0/0:23,0:23:69.20:0,69,1259	1/1:0,14:14:39.13:596,39,0	1/1:2,18:20:51.17:779,51,0	0/0:19,0:19:57.19:0,57,1062	0/0:30,0:30:90.29:0,90,1675	0/0:16,0:16:48.15:0,48,877	1/1:0,21:20:54.10:797,54,0	1/1:0,32:31:81.28:1238,81,0	1/1:0,27:26:63.21:963,63,0	0/0:22,0:22:66.20:0,66,1174	0/0:45,0:45:99:0,135,2497	0/0:25,0:25:75.22:0,75,1334	0/0:16,0:16:48.15:0,48,895
chr10	62804082	.	ATG	A	3834.13	PASS	AB=0.854;AC=34;AF=0.630;AN=54;BaseQRankSum=0.412;DP=585;FS=19.528;HRun=0;HaplotypeScore=95.0197;InbreedingCoeff=0.4778;MQ=59.96;MQ0=11;MQRankSum=3.267;QD=9.24;ReadPosRankSum=4.206;VQSLOD=1.7837;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:30:17.97:0,18,170	0/1:8,1:9:15.11:15,0,208	./.	0/0:22,0:11:1.25:0,1,3	0/0:14,0:17:11.99:0,12,103	1/1:16,9:25:17.78:178,18,0	1/1:14,1:14:6.01:66,6,0	0/1:38,2:39:5.63:6,0,217	0/1:21,1:22:6.09:6,0,312	0/1:15,10:26:5.99:339,0,6	1/1:12,15:26:27.07:298,27,0	1/1:10,3:14:17.88:180,18,0	1/1:8,8:16:18.05:199,18,0	1/1:10,12:22:27.07:298,27,0	1/1:5,3:9:14.87:147,15,0	1/1:11,10:21:33.56:365,34,0	0/0:28,0:28:30.57:0,31,440	0/1:28,3:31:60.88:61,0,369	1/1:5,3:8:11.87:113,12,0	1/1:12,9:23:33.39:347,33,0	1/1:14,11:23:18.04:199,18,0	0/0:8,0:12:11.74:0,12,90	0/0:9,0:15:12.79:0,13,119	0/0:18,0:24:5.38:0,5,51	1/1:9,6:15:18.05:199,18,0	1/1:14,10:23:30.08:332,30,0	0/1:17,13:29:51.24:326,0,51	1/1:6,4:11:17.71:161,18,0
chr10	62804152	.	G	GTT	3880.13	PASS	AB=0.904;AC=34;AF=0.607;AN=56;BaseQRankSum=-0.110;DP=452;FS=3.278;HRun=14;HaplotypeScore=96.7906;InbreedingCoeff=0.6272;MQ=66.94;MQ0=2;MQRankSum=-0.754;QD=13.43;ReadPosRankSum=-6.014;VQSLOD=1.2576;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:28:43.20:0,43,311	0/0:7,0:7:8.52:0,9,62	0/1:17,0:14:14:14,0,17	0/1:8,0:7:12.18:12,0,19	0/0:20,0:21:1.30:0,1,138	1/1:12,2:14:21.05:249,21,0	1/1:6,10:16:21.06:261,21,0	0/1:18,0:18:14.22:14,0,62	0/0:12,0:13:20.50:0,21,162	1/1:12,0:12:9.88:84,10,0	1/1:9,3:12:16.86:187,17,0	1/1:4,6:12:12.64:117,13,0	1/1:16,1:17:26.95:279,27,0	1/1:12,7:20:41.47:479,41,0	0/1:6,8:16:5.42:119,0,5	1/1:10,8:20:33:358,33,0	0/0:28,0:29:32.46:0,32,317	0/0:22,0:23:13.33:0,13,295	1/1:16,1:18:26.34:251,26,0	1/1:6,9:16:26.98:298,27,0	1/1:10,5:18:31.64:279,32,0	0/0:7,0:7:5.78:0,6,50	0/0:13,0:15:10.01:0,10,79	0/0:16,0:17:14.47:0,14,153	1/1:8,2:11:13.82:128,14,0	1/1:11,5:17:16.29:189,16,0	1/1:14,4:19:22.34:466,22,0	1/1:4,3:7:8.98:96,9,0
chr10	62804214	.	TCTACCACTGAG	T	752.88	PASS	AC=2;AF=0.038;AN=52;BaseQRankSum=4.598;DP=448;FS=11.292;HRun=0;HaplotypeScore=145.5706;InbreedingCoeff=0.9281;MQ=53.17;MQ0=6;MQRankSum=-4.311;QD=68.44;ReadPosRankSum=0.988;VQSLOD=2.9611;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:31:87.26:0,87,4680	0/0:6,0:6:18.06:0,18,1006	./.	./.	0/0:15,0:15:33.11:0,33,1834	0/0:10,0:10:27.09:0,27,1499	0/0:27,0:26:64.10:0,64,3506	0/0:22,0:19:45.15:0,45,2150	1/1:3,8:11:24.08:846,24,0	0/0:16,0:16:48.16:0,48,2708	0/0:16,0:16:39.13:0,39,2222	0/0:18,0:18:51.18:0,51,2867	0/0:16,0:16:48.16:0,48,2582	0/0:14,0:14:39.13:0,39,2208	0/0:9,0:9:21.07:0,21,1143	0/0:17,0:17:51.18:0,51,2740	0/0:37,0:37:99:0,102,5684	0/0:15,0:15:45.15:0,45,2566	0/0:16,0:14:33.11:0,33,1680	0/0:19,0:19:54.19:0,54,3030	0/0:20,0:20:57.20:0,57,3227	0/0:8,0:8:24.08:0,24,1347	0/0:15,0:15:36.08:0,36,1824	0/0:22,0:21:51.18:0,51,2886	0/0:10,0:9:27.09:0,27,1521	0/0:14,0:14:42.14:0,42,2378	0/0:37,0:37:99:0,111,6156	0/0:4,0:4:9.03:0,9,513
chr10	62804345	.	C	CA	972.06	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-6.771;DP=519;FS=6.203;HRun=10;HaplotypeScore=55.4561;InbreedingCoeff=0.8697;MQ=66.16;MQ0=0;MQRankSum=0.637;QD=22.61;ReadPosRankSum=0.521;VQSLOD=4.5546;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:62.92:0,63,517	0/0:11,0:11:25.98:0,26,203	0/0:13,0:13:11.43:0,11,71	0/0:11,0:10:2.97:0,3,25	0/0:18,0:18:41.41:0,41,336	0/0:20,1:21:24.79:0,25,401	0/0:19,0:19:35.91:0,36,290	0/0:28,2:30:45.91:0,46,584	0/0:1,0:12:22.41:0,22,65	0/0:19,0:19:44.25:0,44,366	0/0:13,1:15:8.98:0,9,267	0/0:26,0:26:71.85:0,72,581	0/0:23,0:23:47.89:0,48,394	0/0:16,0:17:31.89:0,32,239	0/0:19,0:19:47.92:0,48,390	0/0:24,0:24:59.89:0,60,489	0/0:17,0:17:50.93:0,51,416	0/0:22,0:22:53.88:0,54,443	0/0:17,0:17:41.94:0,42,345	0/0:20,0:20:59.92:0,60,490	0/0:15,0:15:29.96:0,30,246	0/0:10,0:10:26.96:0,27,221	0/0:20,0:20:44.93:0,45,369	0/0:14,0:14:26.90:0,27,218	0/0:19,0:19:50.92:0,51,419	1/1:7,21:27:19.86:612,20,0	0/0:19,0:20:46.96:0,47,375	1/1:0,15:15:45.11:480,45,0
chr10	62804649	.	A	AT	9490.53	PASS	AB=0.717;AC=45;AF=0.804;AN=56;BaseQRankSum=-10.981;DP=554;FS=3.330;HRun=9;HaplotypeScore=55.1422;InbreedingCoeff=0.6445;MQ=69.49;MQ0=2;MQRankSum=1.433;QD=20.45;ReadPosRankSum=-1.188;VQSLOD=4.8418;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:48,1:49:99:0,102,1113	0/1:2,4:6:17.03:57,0,17	0/0:7,0:6:11.72:0,12,85	0/1:12,0:10:19.02:19,0,47	0/0:14,0:14:35.97:0,36,312	1/1:4,18:22:19.08:439,19,0	1/1:3,19:22:51.14:564,51,0	1/1:12,38:50:99:1136,105,0	0/0:20,0:20:56.97:0,57,491	1/1:4,13:17:39.07:411,39,0	1/1:0,10:10:27.07:295,27,0	1/1:6,19:25:45.11:491,45,0	1/1:4,14:18:36.10:398,36,0	1/1:1,16:17:36.10:398,36,0	1/1:5,20:25:42.11:455,42,0	1/1:2,17:19:22.07:472,22,0	1/1:6,19:25:45.12:498,45,0	1/1:5,17:22:16.06:405,16,0	1/1:7,10:17:7.02:297,7,0	1/1:3,12:15:36.01:368,36,0	1/1:2,10:11:27.07:299,27,0	1/1:2,6:8:15.04:165,15,0	0/1:2,9:11:8.01:148,0,8	1/1:5,25:30:46.34:719,46,0	1/1:2,13:15:21.06:232,21,0	1/1:2,21:23:40.11:662,40,0	1/1:3,3:33:60.02:331,60,0	1/1:0,10:10:21.06:232,21,0
chr10	62805456	.	GT	G	5317.95	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=11.762;DP=645;FS=14.848;HRun=2;HaplotypeScore=62.0973;InbreedingCoeff=0.9998;MQ=85.24;MQ0=0;MQRankSum=-3.506;QD=36.18;ReadPosRankSum=1.670;VQSLOD=3.8709;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,117,1749	1/1:0,10:10:27.09:350,27,0	0/0:22,0:22:63.19:0,63,892	0/0:25,0:25:69.19:0,69,980	0/0:27,0:27:81.26:0,81,1194	0/0:25,0:24:69.23:0,69,1034	0/0:17,0:17:51.17:0,51,761	1/1:0,15:15:45.13:569,45,0	0/0:17,0:17:51.17:0,51,763	0/0:24,0:24:72.20:0,72,1005	0/0:15,0:15:45.15:0,45,674	0/0:31,0:31:87.29:0,87,1300	0/0:19,0:19:54.18:0,54,809	0/0:25,0:25:75.24:0,75,1103	0/0:22,0:22:60.20:0,60,899	0/0:30,0:30:90.30:0,90,1348	1/1:0,31:31:90.29:1168,90,0	1/1:0,26:26:69.22:894,69,0	0/0:20,0:20:57.19:0,57,854	0/0:22,0:22:63.20:0,63,919	0/0:32,0:32:96.33:0,96,1439	1/1:0,15:15:42.14:545,42,0	1/1:0,14:14:42.14:545,42,0	1/1:1,35:36:96.31:1246,96,0	0/0:13,0:13:39.13:0,39,584	0/0:31,0:31:93.32:0,93,1393	0/0:21,0:21:60.20:0,60,899	0/0:21,0:21:63.21:0,63,944
chr10	62805562	.	GA	G	411.38	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.385;DP=594;FS=0.000;HRun=2;HaplotypeScore=53.0118;InbreedingCoeff=0.7912;MQ=57.15;MQ0=6;MQRankSum=1.408;QD=27.43;ReadPosRankSum=0.585;VQSLOD=3.1181;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,120,1734	0/0:6,0:6:18.06:0,18,270	0/0:5,0:3:8.67:0,9,78	0/0:9,0:1:3.01:0,3,44	0/0:24,0:24:72.24:0,72,1058	0/0:18,0:17:54.17:0,54,787	0/0:28,0:28:81.23:0,81,1154	0/0:25,0:23:69.17:0,69,942	1/1:0,15:15:39.13:506,39,0	0/0:13,0:13:39.13:0,39,562	0/0:26,0:25:75.21:0,75,1053	0/0:18,0:18:51.16:0,51,744	0/0:14,0:14:42.14:0,42,629	0/0:18,0:18:50.99:0,51,714	0/0:23,0:23:69.22:0,69,1014	0/0:19,1:20:15.16:0,15,702	0/0:36,0:36:99:0,108,1543	0/0:29,0:29:84.20:0,84,1208	0/0:19,0:18:54.18:0,54,808	0/0:29,0:29:78.26:0,78,1149	0/0:15,0:15:42.13:0,42,609	0/0:28,0:27:78.16:0,78,1135	0/0:24,0:24:66.21:0,66,962	0/0:28,0:28:81.26:0,81,1187	0/0:17,0:17:51.17:0,51,762	0/0:28,0:28:84.27:0,84,1215	0/0:24,0:24:72.19:0,72,1032	0/0:15,0:15:45.15:0,45,674
chr10	62806649	.	CT	C	2290.56	PASS	AB=0.602;AC=43;AF=0.768;AN=56;BaseQRankSum=-0.019;DP=370;FS=1.539;HRun=14;HaplotypeScore=40.9856;InbreedingCoeff=0.4254;MQ=59.05;MQ0=6;MQRankSum=1.944;QD=7.71;ReadPosRankSum=2.708;VQSLOD=2.0882;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,1:35:33.22:0,33,373	1/1:0,0:1:2.04:6,2,0	0/0:8,0:3:5.58:0,6,27	0/0:13,0:8:3.87:0,4,25	0/0:14,0:14:11.96:0,12,99	1/1:3,7:11:19.81:126,20,0	1/1:8,9:22:35.94:199,36,0	1/1:14,14:29:0.19:220,0,0	1/1:1,4:6:13.93:88,14,0	1/1:2,8:11:22.76:146,23,0	1/1:2,1:6:9.07:38,9,0	1/1:2,10:12:17.83:123,18,0	1/1:16,2:18:22.14:133,22,0	0/1:4,7:10:12.83:67,0,13	0/1:4,11:14:4.02:120,0,4	1/1:8,6:14:16.80:109,17,0	1/1:10,14:23:35.76:223,36,0	1/1:8,12:20:8.29:175,8,0	1/1:11,4:14:2.89:40,3,0	0/1:5,8:12:10.05:85,0,10	1/1:1,3:4:2.97:21,3,0	1/1:2,0:2:2.95:19,3,0	1/1:0,3:3:5.95:41,6,0	1/1:7,3:10:11.74:82,12,0	1/1:3,5:8:13.93:88,14,0	1/1:8,8:19:22.16:138,22,0	1/1:10,8:19:16.03:158,16,0	0/0:2,0:2:0:0,0,0
chr10	62807085	.	C	CTT	5698.48	PASS	AB=0.608;AC=48;AF=0.857;AN=56;BaseQRankSum=-1.399;DP=507;FS=9.388;HRun=13;HaplotypeScore=96.6549;InbreedingCoeff=0.4133;MQ=63.03;MQ0=5;MQRankSum=-0.432;QD=12.47;ReadPosRankSum=-1.002;VQSLOD=2.9767;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:10,0:35:34.86:88,0,35	1/1:2,1:5:6.01:69,6,0	0/0:22,0:11:0.48:0,0,44	0/0:18,0:10:6.10:0,6,31	0/1:8,0:19:23.82:50,0,24	1/1:11,0:23:36.05:354,36,0	1/1:16,1:20:32.32:246,32,0	1/1:12,22:35:68.17:675,68,0	1/1:9,0:17:13.55:148,14,0	1/1:9,0:14:15.59:144,16,0	1/1:19,0:21:28.49:237,28,0	1/1:5,0:11:14.96:137,15,0	1/1:13,1:16:18.67:179,19,0	1/1:5,0:12:12.02:120,12,0	1/1:11,0:14:28.59:262,29,0	1/1:5,0:8:10.65:116,11,0	1/1:11,26:38:57.12:727,57,0	1/1:10,8:20:33.09:390,33,0	1/1:21,0:32:31.70:286,32,0	1/1:16,0:15:14.76:109,15,0	0/0:8,0:7:0.52:0,1,4	1/1:2,3:6:12.03:150,12,0	1/1:5,6:11:14.48:150,14,0	1/1:7,8:15:17.99:210,18,0	1/1:7,1:13:24.33:239,24,0	1/1:10,2:19:19.54:206,20,0	1/1:13,0:19:21.27:258,21,0	1/1:7,0:7:18.53:148,19,0
chr10	62808388	.	C	CGTGT	2891.95	PASS	AB=0.863;AC=49;AF=0.907;AN=54;BaseQRankSum=2.481;DP=568;FS=3.358;HRun=0;HaplotypeScore=135.2524;InbreedingCoeff=0.2766;MQ=48.37;MQ0=9;MQRankSum=0.466;QD=5.36;ReadPosRankSum=-0.429;VQSLOD=2.5056;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:9,19:31:38.81:813,39,0	1/1:11,0:11:6.66:71,7,0	0/0:26,0:10:11.99:0,12,154	0/1:35,0:20:2.41:2,0,4	0/1:3,4:9:37.99:87,0,38	1/1:18,0:18:6.02:82,6,0	1/1:25,0:25:2.81:15,3,0	1/1:20,0:18:15.37:111,15,0	1/1:23,0:23:5.78:103,6,0	1/1:17,0:16:4.31:110,4,0	./.	1/1:31,0:31:9.32:95,9,0	1/1:15,0:15:11.03:85,11,0	1/1:27,0:26:11.68:133,12,0	1/1:30,0:30:11.71:146,12,0	1/1:16,0:16:10.99:204,11,0	1/1:20,0:19:6.02:100,6,0	1/1:31,0:31:14.74:231,15,0	1/1:23,0:21:20.86:163,21,0	1/1:9,0:9:2.88:15,3,0	0/1:42,0:38:0.50:1,0,0	1/1:19,0:19:0.47:1,0,0	1/1:6,0:6:5.96:45,6,0	1/1:36,0:35:5.98:46,6,0	1/1:12,0:12:3.01:52,3,0	1/1:12,0:11:15:152,15,0	1/1:16,0:16:5.63:94,6,0	1/1:5,0:5:5.93:47,6,0
chr10	62808408	.	T	TGTGTGTGTGTGTGCGCGC	9839.01	PASS	AB=0.675;AC=45;AF=0.804;AN=56;BaseQRankSum=-2.319;DP=667;FS=0.632;HRun=0;HaplotypeScore=176.0434;InbreedingCoeff=0.4566;MQ=50.69;MQ0=14;MQRankSum=-2.742;QD=18.36;ReadPosRankSum=2.184;VQSLOD=3.7945;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:5.79:0,6,1057	1/1:12,0:12:26.58:492,27,0	0/0:48,0:17:43.54:0,44,701	0/0:39,0:17:27.64:0,28,635	0/0:13,0:12:18.06:0,18,462	1/1:0,0:20:6.02:262,6,0	1/1:2,0:33:2.79:33,3,0	1/1:25,0:23:51.01:876,51,0	1/1:1,0:25:7.41:316,7,0	1/1:5,0:18:34.98:739,35,0	1/1:7,0:7:14.81:102,15,0	1/1:1,0:35:9.37:425,9,0	1/1:0,0:18:12.04:459,12,0	1/1:2,0:30:9.03:390,9,0	1/1:3,0:31:12.51:497,13,0	1/1:2,0:23:15.01:655,15,0	1/1:2,0:19:6.02:391,6,0	1/1:4,0:32:21.50:1207,21,0	1/1:21,0:18:43.90:728,44,0	1/1:5,0:18:1.89:37,2,0	0/1:43,0:38:42.65:88,0,43	1/1:13,0:18:5.66:361,6,0	1/1:0,6:8:6.02:446,6,0	0/1:4,9:41:1.41:223,0,1	1/1:2,0:14:2.86:145,3,0	1/1:2,0:13:22.86:565,23,0	1/1:1,0:17:7.27:281,7,0	0/1:0,0:9:35.38:121,0,35
chr10	62809262	.	A	ACG	859.81	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-7.124;DP=819;FS=0.000;HRun=0;HaplotypeScore=159.8612;InbreedingCoeff=0.9882;MQ=83.99;MQ0=0;MQRankSum=-2.035;QD=39.08;ReadPosRankSum=-3.714;VQSLOD=3.1224;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,111,1803	0/0:20,0:20:57.43:0,57,497	0/0:21,0:21:60.20:0,60,975	0/0:30,0:30:90.29:0,90,1404	0/0:40,0:40:99:0,120,1899	0/0:30,0:30:89.68:0,90,705	0/0:18,0:18:53.66:0,54,395	0/0:52,0:52:99:0,120,1122	1/1:1,20:22:51.17:955,51,0	0/0:33,0:33:70.16:0,70,674	0/0:32,0:32:83.81:0,84,697	0/0:27,0:27:75.55:0,76,586	0/0:24,0:24:19.72:0,20,432	0/0:25,0:25:71.77:0,72,578	0/0:40,0:40:99:0,114,891	0/0:25,0:25:46.68:0,47,513	0/0:28,0:28:58.69:0,59,576	0/0:22,0:22:19.41:0,19,389	0/0:29,0:29:56.51:0,57,580	0/0:35,0:35:29.87:0,30,707	0/0:30,0:30:65.69:0,66,660	0/0:35,0:35:99:0,102,832	0/0:25,0:25:44.70:0,45,511	0/0:20,0:20:59.82:0,60,479	0/0:24,0:24:45.70:0,46,508	0/0:45,0:45:99:0,134,1024	0/0:27,0:27:56.75:0,57,609	0/0:23,0:23:41.98:0,42,450
chr10	62809609	.	A	ACATCATCAT	18641.25	PASS	AB=1.000;AC=47;AF=0.839;AN=56;BaseQRankSum=6.447;DP=800;FS=6.655;HRun=0;HaplotypeScore=222.4601;InbreedingCoeff=0.8669;MQ=54.36;MQ0=3;MQRankSum=-10.767;QD=26.94;ReadPosRankSum=-0.754;VQSLOD=3.6723;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:72.22:0,72,1809	1/1:6,15:23:33:1505,33,0	0/0:21,0:18:15.05:0,15,318	0/0:25,0:24:20.97:0,21,381	0/0:31,0:31:63.20:0,63,1552	1/1:16,0:16:32.86:513,33,0	1/1:19,0:19:18.06:280,18,0	1/1:40,0:38:36.11:981,36,0	1/1:10,0:34:42.10:768,42,0	1/1:23,0:23:37.11:574,37,0	1/1:34,0:34:49.22:746,49,0	1/1:42,0:42:38.87:600,39,0	1/1:30,0:30:36.12:572,36,0	1/1:25,0:25:29.69:475,30,0	1/1:46,0:46:57.19:908,57,0	1/1:35,0:35:54.18:844,54,0	1/1:11,12:25:18.06:797,18,0	1/1:4,9:14:20.59:959,21,0	1/1:20,0:19:15.30:299,15,0	1/1:33,0:32:30.17:755,30,0	1/1:18,0:18:5.91:62,6,0	1/1:11,19:35:42.14:1911,42,0	1/1:5,25:32:37:1563,37,0	1/1:14,15:31:18.06:769,18,0	1/1:24,0:24:42.14:665,42,0	1/1:37,0:37:21.16:990,21,0	1/1:39,0:39:54.18:841,54,0	0/1:16,0:16:2.90:263,0,3
chr10	62809634	.	C	CATCATT	26892.17	PASS	AB=0.948;AC=39;AF=0.696;AN=56;BaseQRankSum=-7.164;DP=858;FS=1.912;HRun=0;HaplotypeScore=142.8210;InbreedingCoeff=0.2470;MQ=59.55;MQ0=4;MQRankSum=-10.754;QD=35.76;ReadPosRankSum=8.935;VQSLOD=4.2383;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:87.09:0,87,1687	0/1:22,0:22:57.93:577,0,58	0/0:18,0:15:35.16:0,35,469	0/0:19,0:19:46.82:0,47,530	0/0:36,0:36:98.86:0,99,1604	1/1:0,19:20:33.11:1168,33,0	1/1:0,26:27:18.06:639,18,0	0/1:45,0:43:56.69:57,0,580	0/1:30,0:30:99:988,0,106	1/1:2,22:27:74.59:1650,75,0	1/1:0,31:33:74.57:1743,75,0	1/1:6,29:37:41.81:1369,42,0	1/1:1,27:30:36.12:1268,36,0	1/1:1,23:27:29.77:1068,30,0	1/1:2,40:49:57.20:2018,57,0	1/1:1,31:34:54.66:1928,55,0	0/1:29,0:29:99:332,0,126	0/1:19,0:18:99:373,0,104	1/1:5,24:29:74.35:1125,74,0	1/1:3,34:38:92.57:2017,93,0	1/1:5,12:21:5.91:123,6,0	0/1:40,0:40:99:802,0,264	0/1:28,0:28:89.73:622,0,90	0/1:29,0:29:99:156,0,192	1/1:1,30:34:42.14:1498,42,0	1/1:1,38:45:99:2823,120,0	1/1:1,36:40:54.19:1925,54,0	0/1:2,13:17:2.83:622,0,3
chr10	62811709	.	CT	C	6382.90	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=13.512;DP=769;FS=1.020;HRun=2;HaplotypeScore=75.8294;InbreedingCoeff=0.9997;MQ=88.59;MQ0=0;MQRankSum=-1.230;QD=35.66;ReadPosRankSum=1.233;VQSLOD=5.3666;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,147,2047	1/1:0,9:9:27.09:346,27,0	0/0:37,0:37:99:0,105,1489	0/0:23,0:23:49.30:0,49,779	0/0:32,0:32:93.20:0,93,1300	0/0:21,0:21:63.19:0,63,892	0/0:23,0:23:69.23:0,69,1034	1/1:2,36:38:99:1374,108,0	0/0:27,0:27:81.27:0,81,1196	0/0:31,0:31:90.30:0,90,1331	0/0:12,0:12:33.11:0,33,493	0/0:34,0:34:99:0,102,1507	0/0:23,0:23:69.23:0,69,1032	0/0:23,0:23:69.23:0,69,1033	0/0:39,0:39:99:0,114,1670	0/0:30,0:30:87.27:0,87,1264	1/1:0,31:31:84.27:1091,84,0	1/1:0,19:19:54.18:701,54,0	0/0:21,0:21:63.21:0,63,935	0/0:21,0:21:63.21:0,63,942	0/0:41,0:41:99:0,120,1753	1/1:0,34:34:87.28:1119,87,0	1/1:0,20:20:51.17:662,51,0	1/1:0,28:28:84.27:1090,84,0	0/0:20,0:20:57.19:0,57,853	0/0:38,0:38:99:0,108,1601	0/0:34,0:34:99:0,102,1506	0/0:11,0:11:33.11:0,33,493
chr10	62815823	.	G	GTGGA	1599.44	PASS	AC=44;AF=0.846;AN=52;BaseQRankSum=-1.406;DP=118;FS=4.355;HRun=0;HaplotypeScore=28.1685;InbreedingCoeff=0.4253;MQ=53.93;MQ0=5;MQRankSum=0.750;QD=17.58;ReadPosRankSum=0.613;VQSLOD=2.7255;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:8:0.02:0,0,135	1/1:1,0:1:3:25,3,0	0/0:5,0:3:2.17:0,2,53	0/0:13,0:8:23.86:0,24,210	./.	1/1:7,0:7:17.95:144,18,0	1/1:4,0:3:8.99:74,9,0	1/1:10,0:10:20.90:174,21,0	0/0:1,0:1:3:0,3,27	1/1:1,0:1:3:28,3,0	1/1:3,0:2:3:25,3,0	1/1:4,0:4:11.99:100,12,0	1/1:3,0:3:8.87:65,9,0	1/1:2,0:2:5.96:45,6,0	1/1:4,0:4:8.99:75,9,0	1/1:1,5:6:2.80:74,3,0	1/1:6,0:5:14.91:113,15,0	1/1:1,0:1:2.99:23,3,0	1/1:1,0:1:3:27,3,0	1/1:1,0:1:3:25,3,0	1/1:4,0:3:8.99:74,9,0	1/1:7,0:7:9.91:134,10,0	1/1:6,0:6:14.91:114,15,0	1/1:6,0:6:8.93:67,9,0	1/1:5,0:4:11.94:142,12,0	1/1:4,0:4:9:80,9,0	1/1:5,0:4:14.53:102,15,0	./.
chr10	62816276	.	T	TG	548.31	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-2.778;DP=749;FS=7.654;HRun=0;HaplotypeScore=112.4920;InbreedingCoeff=0.9595;MQ=71.89;MQ0=5;MQRankSum=-0.248;QD=17.13;ReadPosRankSum=2.988;VQSLOD=5.9977;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,117,1193	0/0:10,0:9:13.14:0,13,99	0/0:32,0:14:34.04:0,34,248	0/0:27,0:17:25.80:0,26,245	0/0:35,0:34:83.90:0,84,725	0/0:22,0:21:36.63:0,37,320	0/0:25,0:25:46.24:0,46,381	0/0:38,0:38:68.77:0,69,475	1/1:4,28:32:58.50:643,59,0	0/0:37,0:37:59.80:0,60,558	0/0:21,0:21:53.42:0,53,409	0/0:38,0:38:58.17:0,58,498	0/0:17,0:17:27.37:0,27,163	0/0:26,0:26:35.71:0,36,302	0/0:33,0:33:65.19:0,65,545	0/0:31,0:30:47.68:0,48,367	0/0:26,0:26:50.30:0,50,391	0/0:16,0:16:33.56:0,34,254	0/0:18,0:18:43.87:0,44,300	0/0:28,0:28:51.10:0,51,368	0/0:25,0:25:54.51:0,55,401	0/0:29,0:27:56.43:0,56,440	0/0:20,0:20:35.32:0,35,281	0/0:26,0:26:24.35:0,24,134	0/0:25,0:25:49.69:0,50,416	0/0:30,0:30:76.09:0,76,624	0/0:28,0:28:65.50:0,66,537	0/0:9,0:9:15.89:0,16,85
chr10	62819038	.	C	CT	568.76	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=0.341;DP=500;FS=4.835;HRun=8;HaplotypeScore=59.1720;InbreedingCoeff=0.7029;MQ=55.35;MQ0=19;MQRankSum=0.542;QD=6.12;ReadPosRankSum=-1.823;VQSLOD=0.0292;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,28:32:20.66:230,21,0	0/0:4,0:4:6:0,6,54	0/1:38,0:5:2.87:3,0,34	0/0:33,0:10:17.74:0,18,131	1/1:4,19:23:42.58:457,43,0	0/0:7,0:7:14.86:0,15,126	0/0:9,0:9:20.97:0,21,184	0/0:37,0:37:62.95:0,63,568	0/0:6,0:6:1.41:0,1,76	0/0:20,0:20:51.90:0,52,503	0/0:24,0:24:57.92:0,58,469	0/0:14,0:14:21.53:0,22,157	0/0:12,0:12:22.05:0,22,198	0/0:10,0:10:17.98:0,18,159	0/0:15,0:15:21.90:0,22,191	0/0:15,0:15:26.88:0,27,224	0/0:28,0:28:50.86:0,51,443	0/0:19,0:19:26.81:0,27,258	0/0:22,0:19:36.28:0,36,291	0/0:19,0:19:38.84:0,39,340	0/0:7,0:7:14.69:0,15,127	0/0:7,0:7:15.01:0,15,136	0/0:17,0:17:26.62:0,27,245	0/0:12,0:12:20.73:0,21,186	0/0:18,0:18:29.88:0,30,255	0/0:19,0:19:37.84:0,38,332	0/0:15,0:15:29.77:0,30,256	0/0:16,0:16:42.01:0,42,378
chr10	62821762	.	A	ATTTG	18957.90	PASS	AB=0.615;AC=44;AF=0.786;AN=56;BaseQRankSum=-6.425;DP=680;FS=1.205;HRun=0;HaplotypeScore=104.5821;InbreedingCoeff=0.5586;MQ=61.73;MQ0=6;MQRankSum=-0.907;QD=32.57;ReadPosRankSum=0.884;VQSLOD=5.0246;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:51.17:0,51,810	1/1:15,0:15:23.87:376,24,0	0/0:27,0:15:9.03:0,9,141	0/0:11,0:9:12.04:0,12,183	0/0:32,0:33:63.18:0,63,939	1/1:5,14:19:30.10:719,30,0	1/1:10,16:26:42.14:1005,42,0	1/1:45,0:45:18.04:240,18,0	1/1:16,0:16:27.09:419,27,0	1/1:14,26:40:81.28:1914,81,0	1/1:8,21:28:57.19:1331,57,0	1/1:4,11:15:30.10:719,30,0	0/1:9,15:24:5.76:893,0,6	0/1:6,19:25:2.75:961,0,3	1/1:6,16:24:39.13:935,39,0	1/1:12,18:32:42.14:992,42,0	1/1:14,0:14:6.02:98,6,0	1/1:18,0:18:12.04:197,12,0	1/1:12,8:19:24.06:526,24,0	1/1:9,23:32:69.24:1612,69,0	1/1:9,16:25:45.15:1079,45,0	1/1:18,0:18:30.10:477,30,0	1/1:23,0:23:34.02:499,34,0	1/1:8,0:8:6.02:98,6,0	0/1:12,12:25:99:749,0,102	1/1:12,21:33:63.21:1432,63,0	1/1:18,15:34:39.13:935,39,0	0/1:8,13:21:56.67:752,0,57
chr10	62821766	.	G	GTTTGTTTA	9881.05	PASS	AB=1.000;AC=32;AF=0.571;AN=56;BaseQRankSum=10.472;DP=691;FS=4.155;HRun=0;HaplotypeScore=179.4901;InbreedingCoeff=-0.1819;MQ=59.32;MQ0=8;MQRankSum=-2.382;QD=16.66;ReadPosRankSum=8.242;VQSLOD=2.9465;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:66.14:0,66,1496	1/1:0,15:17:27.48:961,27,0	0/0:30,0:16:24.38:0,24,432	0/0:11,0:9:17.17:0,17,370	0/0:33,0:33:93.16:0,93,1863	0/1:19,0:19:14.22:117,0,14	0/1:24,0:24:91.61:170,0,92	1/1:44,0:44:97.92:1133,98,0	1/1:0,14:19:27.09:1130,27,0	0/1:36,0:36:44.96:368,0,45	0/1:30,0:29:95.08:220,0,95	0/1:15,0:15:15.22:117,0,15	0/1:25,0:25:99:142,0,149	0/1:27,0:27:99:154,0,147	0/1:25,0:25:69.56:145,0,70	0/1:30,0:30:76.56:144,0,77	1/1:2,13:17:9.03:388,9,0	1/1:3,13:20:9.03:388,9,0	0/1:20,0:19:64.45:64,0,140	0/1:32,0:32:45.33:353,0,45	0/1:24,0:24:99:160,0,129	1/1:3,15:21:35.90:1247,36,0	1/1:4,19:25:38.39:1307,38,0	1/1:4,4:10:12.04:516,12,0	0/1:24,0:24:99:105,0,359	0/1:36,0:35:99:284,0,173	0/1:32,0:32:99:142,0,157	0/1:21,0:21:99:127,0,146
chr10	62823760	.	GA	G	541.95	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.583;DP=761;FS=3.178;HRun=4;HaplotypeScore=80.3331;InbreedingCoeff=0.9992;MQ=67.32;MQ0=0;MQRankSum=-1.689;QD=22.58;ReadPosRankSum=0.559;VQSLOD=2.6802;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,150,2050	0/0:12,0:12:30.09:0,30,394	0/0:22,0:20:60.15:0,60,758	0/0:24,0:22:63.17:0,63,807	0/0:34,0:34:96.23:0,96,1280	0/0:32,0:32:93.10:0,93,1225	0/0:26,0:26:69.20:0,69,930	0/0:31,0:31:84.25:0,84,1130	1/1:0,24:24:54.16:637,54,0	0/0:17,0:17:51.17:0,51,711	0/0:16,0:16:45.10:0,45,605	0/0:27,0:27:78.13:0,78,1022	0/0:28,0:27:81.13:0,81,1043	0/0:37,0:37:99:0,105,1448	0/0:37,0:37:99:0,105,1438	0/0:42,0:42:99:0,99,1444	0/0:32,0:32:87.23:0,87,1145	0/0:24,0:24:69.13:0,69,920	0/0:14,0:14:42.11:0,42,554	0/0:15,0:15:45.11:0,45,607	0/0:53,0:53:99:0,156,2087	0/0:23,0:23:63.01:0,63,788	0/0:17,0:17:48.06:0,48,624	0/0:33,0:33:90.23:0,90,1216	0/0:25,0:25:72.21:0,72,977	0/0:30,0:30:84.11:0,84,1054	0/0:22,0:22:66.17:0,66,874	0/0:12,0:12:33.11:0,33,460
chr10	62824040	.	T	TTTTTGGTTC	14232.87	PASS	AB=0.767;AC=37;AF=0.661;AN=56;BaseQRankSum=-2.421;DP=496;FS=5.265;HRun=0;HaplotypeScore=146.5126;InbreedingCoeff=0.0762;MQ=44.51;MQ0=22;MQRankSum=-5.072;QD=33.41;ReadPosRankSum=5.657;VQSLOD=4.1897;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:21:36.63:0,37,477	0/1:5,0:9:13.69:78,0,14	0/0:18,0:6:3.01:0,3,76	0/0:11,0:6:5.85:0,6,48	0/0:17,0:16:21.22:0,21,372	1/1:15,9:21:7.33:654,7,0	1/1:7,0:16:30.10:950,30,0	0/1:22,0:35:62.39:1348,0,62	1/1:6,0:17:20.25:608,20,0	1/1:10,0:22:35.82:905,36,0	0/1:8,0:7:1.81:241,0,2	1/1:9,0:25:33.47:1012,33,0	1/1:14,0:26:43.46:1527,43,0	1/1:11,0:16:13.61:812,14,0	0/1:16,0:19:13.22:609,0,13	1/1:15,0:21:18.61:946,19,0	0/1:13,0:20:16.01:401,0,16	0/1:12,0:11:7.35:321,0,7	1/1:15,0:23:28.28:957,28,0	0/1:3,0:3:11.62:171,0,12	1/1:6,0:8:6.67:279,7,0	0/1:8,0:16:89.94:90,0,229	0/1:6,0:9:32.49:55,0,32	0/1:9,0:11:13.33:194,0,13	1/1:4,0:4:12.04:315,12,0	0/1:11,1:20:23.15:577,0,23	1/1:15,1:30:14.50:931,14,0	1/1:3,0:4:9.03:251,9,0
chr10	62826754	.	AT	A	769.07	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.288;DP=593;FS=2.815;HRun=4;HaplotypeScore=60.9782;InbreedingCoeff=0.8441;MQ=73.45;MQ0=0;MQRankSum=-1.939;QD=27.47;ReadPosRankSum=1.256;VQSLOD=3.0598;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,117,1636	0/0:6,0:6:18.06:0,18,252	0/0:9,0:9:27.09:0,27,353	0/0:14,0:14:42.11:0,42,507	0/0:33,0:33:96.31:0,96,1323	0/0:27,0:27:81.24:0,81,1111	0/0:18,0:18:45.15:0,45,629	0/0:25,0:25:63.20:0,63,852	1/1:2,26:28:72.22:864,72,0	0/0:31,0:31:90.30:0,90,1255	0/0:17,0:17:51.17:0,51,712	0/0:22,0:22:66.22:0,66,922	0/0:22,0:22:63.21:0,63,882	0/0:10,0:10:30.09:0,30,404	0/0:23,0:23:66.19:0,66,897	0/0:21,0:21:60.19:0,60,822	0/0:36,0:36:99:0,105,1451	0/0:24,0:24:66.22:0,66,924	0/0:22,0:22:63.15:0,63,841	0/0:23,0:23:60.20:0,60,839	0/0:32,0:32:93.29:0,93,1282	0/0:14,0:14:42.14:0,42,587	0/0:20,0:20:57.19:0,57,796	0/0:21,0:21:63.19:0,63,863	0/0:17,0:17:45.13:0,45,606	0/0:17,0:17:51.17:0,51,714	0/0:13,0:13:36.12:0,36,504	0/0:8,0:8:2.99:0,3,24
chr10	62826980	.	AT	A	1377.12	PASS	AB=0.830;AC=11;AF=0.196;AN=56;BaseQRankSum=6.531;DP=658;FS=3.704;HRun=13;HaplotypeScore=73.8320;InbreedingCoeff=0.6115;MQ=67.36;MQ0=0;MQRankSum=1.738;QD=10.68;ReadPosRankSum=0.600;VQSLOD=3.3905;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,1:48:99:0,107,1159	0/1:4,5:9:11.31:92,0,11	0/1:11,1:11:6.92:7,0,91	0/0:10,0:10:16.78:0,17,102	0/0:29,2:32:47.02:0,47,598	0/0:13,1:18:22.39:0,22,313	0/0:11,1:11:5.12:0,5,205	1/1:8,17:26:54.10:394,54,0	1/1:5,18:24:20.54:305,21,0	0/0:29,4:37:2.84:0,3,457	0/0:15,0:16:29.88:0,30,276	0/0:25,1:27:41.03:0,41,547	0/0:17,4:21:7.24:0,7,384	0/0:17,1:20:43.15:0,43,397	0/0:27,2:29:53.17:0,53,664	0/0:26,2:29:31.09:0,31,603	1/1:5,18:23:56.64:416,57,0	1/1:9,14:23:44.52:325,45,0	0/0:26,4:32:0.03:0,0,453	0/0:23,1:24:29.13:0,29,425	0/0:12,0:12:24.04:0,24,234	0/0:20,0:20:45.07:0,45,435	0/0:24,1:25:23.14:0,23,377	0/1:11,1:12:0.88:1,0,154	0/0:23,2:27:21.91:0,22,500	0/0:36,1:39:52.02:0,52,786	0/0:32,0:35:80.78:0,81,748	0/0:13,0:15:41.90:0,42,394
chr10	62827031	.	A	AT	5283.66	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-11.592;DP=680;FS=34.330;HRun=6;HaplotypeScore=71.5906;InbreedingCoeff=0.9992;MQ=78.49;MQ0=0;MQRankSum=0.247;QD=32.22;ReadPosRankSum=-2.648;VQSLOD=2.0860;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,156,1590	1/1:2,8:10:27.07:327,27,0	0/0:22,0:22:51.09:0,51,509	0/0:13,0:13:22.44:0,22,210	0/0:32,0:32:96.20:0,96,971	0/0:19,0:19:54.12:0,54,551	0/0:23,0:23:61.38:0,61,615	1/1:3,39:42:99:1380,114,0	0/0:22,0:22:63.13:0,63,635	0/0:37,0:37:99:0,108,1100	0/0:27,0:27:81.18:0,81,825	0/0:23,0:23:66.13:0,66,666	0/0:21,0:21:57.12:0,57,580	0/0:16,0:16:42.08:0,42,425	0/0:31,0:31:78.17:0,78,795	0/0:21,0:21:54.12:0,54,550	1/1:2,18:20:54.17:679,54,0	1/1:5,20:25:63.20:784,63,0	0/0:23,0:23:66.11:0,66,656	0/0:22,0:22:63.14:0,63,642	0/0:18,0:18:51.11:0,51,520	1/1:0,24:24:69.22:868,69,0	1/1:2,24:26:69.22:868,69,0	1/1:3,14:17:30.10:377,30,0	0/0:21,0:21:48.10:0,48,489	0/0:26,0:26:60.12:0,60,612	0/0:31,0:30:87.17:0,87,877	0/0:13,0:13:39.09:0,39,398
chr10	62827425	.	G	GGAA	41381.29	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-7.206;DP=827;FS=0.000;HRun=0;HaplotypeScore=107.2910;InbreedingCoeff=0.9919;MQ=84.87;MQ0=0;MQRankSum=-11.898;QD=53.81;ReadPosRankSum=5.615;VQSLOD=7.1157;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,44:47:99:2653,123,0	1/1:0,16:16:48.16:1068,48,0	0/0:31,0:31:80:0,80,1282	0/0:27,0:27:71.57:0,72,1063	1/1:5,18:23:50.98:949,51,0	1/1:4,32:35:90.27:1962,90,0	1/1:2,20:24:57.15:1214,57,0	1/1:8,28:42:99:2088,108,0	1/1:2,24:26:69.19:1467,69,0	1/1:7,28:35:96.33:2097,96,0	1/1:3,16:19:48.12:992,48,0	1/1:3,30:33:93.32:2017,93,0	1/1:1,23:24:69.19:1493,69,0	1/1:4,29:35:87.17:1801,87,0	1/1:5,31:36:87.26:1895,87,0	1/1:2,40:42:99:2564,117,0	1/1:0,23:24:48.16:1072,48,0	1/1:3,15:18:42.10:891,42,0	1/1:9,18:27:57.17:1210,57,0	1/1:4,24:29:83.92:1490,84,0	1/1:5,36:41:99:1976,99,0	1/1:3,29:33:90.14:1821,90,0	1/1:2,31:33:93.23:1951,93,0	1/1:3,25:28:63.17:1360,63,0	1/1:2,24:26:69.19:1494,69,0	1/1:6,28:35:93.30:1980,93,0	1/1:4,24:29:69.24:1540,69,0	1/1:0,8:8:15.05:335,15,0
chr10	62828182	.	TTTTTTTCTTG	T	6933.13	PASS	AB=1.000;AC=48;AF=0.857;AN=56;BaseQRankSum=-10.224;DP=490;FS=6.044;HRun=0;HaplotypeScore=132.5924;InbreedingCoeff=0.1677;MQ=61.03;MQ0=7;MQRankSum=-0.670;QD=15.10;ReadPosRankSum=-3.793;VQSLOD=2.3778;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:30:23.84:0,24,792	1/1:14,0:13:9.03:151,9,0	0/1:31,0:17:7.58:8,0,391	0/1:18,0:10:10.67:11,0,164	0/1:33,0:32:50.77:51,0,1219	1/1:21,0:21:45.23:476,45,0	1/1:8,0:8:3.01:39,3,0	1/1:28,0:28:53.01:544,53,0	0/1:13,0:12:10.02:10,0,395	1/1:24,1:25:55.90:709,56,0	1/1:11,0:11:15.02:223,15,0	1/1:19,0:19:42.60:407,43,0	1/1:9,0:9:26.95:246,27,0	1/1:1,12:13:3.01:88,3,0	1/1:18,0:18:14.82:416,15,0	1/1:13,0:12:27.01:310,27,0	1/1:9,0:9:11.71:107,12,0	1/1:22,0:22:3.01:30,3,0	1/1:22,0:21:34.42:510,34,0	1/1:24,1:25:26.59:339,27,0	1/1:5,0:5:2.98:23,3,0	1/1:12,0:12:31.99:359,32,0	0/1:15,0:15:0:0,0,0	1/1:0,14:14:3.01:87,3,0	1/1:12,0:12:22.50:351,23,0	0/1:21,0:21:38.26:576,0,38	1/1:19,0:19:52.68:585,53,0	1/1:7,1:8:19.80:277,20,0
chr10	62828183	.	TTTTTTCTTG	T	8567.01	PASS	AB=1.000;AC=47;AF=0.839;AN=56;BaseQRankSum=-10.454;DP=500;FS=11.006;HRun=0;HaplotypeScore=123.2414;InbreedingCoeff=0.2766;MQ=60.37;MQ0=7;MQRankSum=-1.093;QD=19.60;ReadPosRankSum=-5.124;VQSLOD=0.7644;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:30:20.79:0,21,642	1/1:14,0:13:9.03:157,9,0	0/0:32,0:17:6.34:0,6,343	0/1:19,0:10:17.76:18,0,129	0/1:32,0:31:86.65:87,0,1008	1/1:23,0:23:52.88:679,53,0	1/1:10,0:10:3.01:39,3,0	1/1:26,0:26:59.26:622,59,0	0/1:13,0:12:10.07:10,0,329	1/1:2,23:25:56.03:809,56,0	1/1:1,10:11:15.05:280,15,0	1/1:21,0:21:51.06:584,51,0	1/1:11,0:11:33.03:366,33,0	1/1:13,0:13:3.01:74,3,0	1/1:19,0:19:26.56:565,27,0	1/1:12,1:12:27.02:354,27,0	1/1:11,0:11:17.61:238,18,0	1/1:21,0:21:3.01:33,3,0	1/1:21,1:21:46.83:591,47,0	1/1:6,19:25:26.91:375,27,0	1/1:5,0:5:3.01:39,3,0	1/1:12,0:12:32.25:384,32,0	0/1:15,0:15:0:0,0,0	1/1:14,0:14:3.01:74,3,0	1/1:12,0:12:29.78:393,30,0	0/1:21,0:21:26.47:633,0,26	1/1:21,0:21:60.07:835,60,0	1/1:8,0:8:21:328,21,0
chr10	62828184	.	TTTTTCTTG	T	9130.26	PASS	AB=1.000;AC=48;AF=0.857;AN=56;BaseQRankSum=-10.365;DP=500;FS=12.576;HRun=0;HaplotypeScore=115.0252;InbreedingCoeff=0.1386;MQ=60.10;MQ0=7;MQRankSum=-0.911;QD=19.47;ReadPosRankSum=-6.209;VQSLOD=0.6792;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:30:10.12:0,10,507	1/1:3,10:12:9.03:170,9,0	0/1:32,0:17:7.46:7,0,308	0/1:19,0:10:32.77:33,0,100	0/1:32,0:31:99:104,0,807	1/1:24,0:24:61.88:820,62,0	1/1:10,0:10:3.01:39,3,0	1/1:26,0:26:59.57:686,60,0	0/1:13,0:12:11.87:12,0,238	1/1:25,0:25:55.93:808,56,0	1/1:11,0:11:15.05:253,15,0	1/1:20,0:20:50.89:612,51,0	1/1:12,0:12:36.08:431,36,0	1/1:13,0:13:3.01:68,3,0	1/1:19,0:19:40.46:627,40,0	1/1:13,0:12:30.03:383,30,0	1/1:10,0:10:17.97:258,18,0	1/1:20,0:20:3.01:35,3,0	1/1:22,0:21:45.54:593,46,0	1/1:25,0:25:26.64:368,27,0	1/1:1,4:5:3.01:39,3,0	1/1:14,0:14:38.30:505,38,0	0/1:15,0:15:0:0,0,0	1/1:14,0:14:3.01:67,3,0	1/1:12,0:12:29.55:379,30,0	0/1:21,0:21:15.24:640,0,15	1/1:21,0:21:60.11:839,60,0	1/1:8,0:8:21.07:354,21,0
chr10	62828185	.	TTTTCTTG	T	9391.97	PASS	AB=1.000;AC=49;AF=0.875;AN=56;BaseQRankSum=-10.277;DP=500;FS=15.895;HRun=0;HaplotypeScore=107.5341;InbreedingCoeff=0.0356;MQ=59.98;MQ0=7;MQRankSum=-1.358;QD=18.78;ReadPosRankSum=-7.412;VQSLOD=-0.0282;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:31,0:30:3.56:4,0,350	1/1:13,0:12:9.03:150,9,0	0/1:32,0:17:6.73:7,0,245	0/1:18,0:10:19.43:19,0,87	0/1:31,0:30:99:104,0,593	1/1:25,0:25:68.61:882,69,0	1/1:10,0:10:3.01:39,3,0	1/1:3,22:25:59.67:698,60,0	0/1:13,0:12:13.80:14,0,153	1/1:25,0:25:56.01:796,56,0	1/1:11,0:11:15.05:240,15,0	1/1:20,0:20:51.02:641,51,0	1/1:11,1:12:36.08:437,36,0	1/1:13,0:13:2.99:61,3,0	1/1:19,0:19:46.34:676,46,0	1/1:12,0:11:30.05:394,30,0	1/1:10,0:10:18.06:259,18,0	1/1:0,20:20:3.01:36,3,0	1/1:22,0:21:47.65:610,48,0	1/1:25,0:25:26.08:353,26,0	1/1:5,0:5:3.01:40,3,0	1/1:14,0:14:38.33:517,38,0	0/1:15,0:15:0:0,0,0	1/1:14,0:14:3.01:60,3,0	1/1:13,0:13:32.69:434,33,0	0/1:22,0:22:1.80:677,0,2	1/1:21,0:21:60.14:876,60,0	1/1:8,0:8:21.07:367,21,0
chr10	62828188	.	TCTTG	T	9822	PASS	AB=0.888;AC=51;AF=0.911;AN=56;BaseQRankSum=-6.932;DP=476;FS=7.165;HRun=0;HaplotypeScore=83.0784;InbreedingCoeff=0.1073;MQ=59.23;MQ0=7;MQRankSum=-0.760;QD=20.63;ReadPosRankSum=-5.624;VQSLOD=1.9986;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:31:0.22:101,0,0	1/1:12,0:11:9.03:119,9,0	0/1:31,0:17:27.02:27,0,103	0/1:18,0:9:1.72:2,0,38	0/1:31,0:30:35.62:173,0,36	1/1:24,0:24:69.09:943,69,0	1/1:0,0:10:3.01:39,3,0	1/1:23,0:23:57.15:735,57,0	1/1:12,0:12:17.38:121,17,0	1/1:25,0:25:55.69:763,56,0	1/1:10,0:10:15.05:200,15,0	1/1:19,0:19:51.11:654,51,0	1/1:12,0:12:36.09:445,36,0	1/1:12,0:12:3:41,3,0	1/1:18,0:19:53.94:732,54,0	1/1:12,0:11:30.05:376,30,0	1/1:9,0:9:18.53:259,19,0	1/1:20,0:20:3.01:39,3,0	1/1:2,15:16:48.05:634,48,0	1/1:20,0:20:27.02:330,27,0	1/1:4,0:4:3.01:40,3,0	1/1:11,0:12:36.11:515,36,0	0/1:0,14:14:0:0,0,0	1/1:14,0:14:3.01:41,3,0	1/1:13,0:13:36.10:502,36,0	1/1:1,20:21:32.74:715,33,0	1/1:20,0:21:63.17:933,63,0	1/1:8,0:8:21.07:348,21,0
chr10	62828190	.	TTG	T	4866.31	PASS	AB=1.000;AC=50;AF=0.926;AN=54;BaseQRankSum=-5.558;DP=482;FS=8.427;HRun=0;HaplotypeScore=88.3311;InbreedingCoeff=0.0507;MQ=56.26;MQ0=11;MQRankSum=-1.287;QD=10.40;ReadPosRankSum=-3.725;VQSLOD=3.0467;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:32,0:31:8.74:48,0,9	1/1:12,0:11:8.77:52,9,0	0/1:30,0:16:37.64:56,0,38	0/1:16,0:7:0.94:1,0,68	0/1:30,0:29:34.81:120,0,35	1/1:26,0:26:64.23:462,64,0	1/1:11,0:11:2.96:19,3,0	1/1:24,0:23:48.88:336,49,0	1/1:8,5:12:29.48:274,29,0	1/1:25,0:25:44.05:318,44,0	1/1:10,0:10:14.65:90,15,0	1/1:19,0:19:44.22:303,44,0	1/1:11,0:11:31.02:202,31,0	1/1:12,0:12:2.86:15,3,0	1/1:19,0:19:52.91:374,53,0	1/1:11,0:10:19.82:134,20,0	1/1:10,0:10:17.86:129,18,0	1/1:20,0:20:2.96:19,3,0	1/1:17,0:16:43.26:293,43,0	1/1:21,0:20:23.58:152,24,0	1/1:4,0:4:2.97:20,3,0	1/1:14,0:14:32.43:245,32,0	./.	1/1:16,0:14:2.88:15,3,0	1/1:13,0:13:32.39:226,32,0	1/1:21,0:21:46.29:343,46,0	1/1:21,0:21:59.58:450,60,0	1/1:10,0:10:21.33:170,21,0
chr10	62828257	.	A	ACCACTGAGCTAAATCCCCAGCC	37185.86	PASS	AB=0.974;AC=47;AF=0.839;AN=56;BaseQRankSum=2.339;DP=431;FS=0.000;HRun=0;HaplotypeScore=187.8026;InbreedingCoeff=0.5652;MQ=35.38;MQ0=22;MQRankSum=-8.051;QD=98.64;ReadPosRankSum=-1.152;VQSLOD=4.4157;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:30:69.22:0,69,3544	1/1:7,0:6:6.02:428,6,0	0/0:5,0:5:15.04:0,15,336	0/1:7,0:4:13.96:14,0,187	0/0:15,0:15:21.07:0,21,698	1/1:21,0:21:36.02:1962,36,0	1/1:14,0:12:15:816,15,0	1/1:29,0:21:39.09:1499,39,0	0/1:11,1:10:2.92:1093,0,3	1/1:16,0:15:38.99:1822,39,0	1/1:11,0:11:12.04:520,12,0	1/1:8,4:12:21.07:1926,21,0	1/1:7,1:7:12.04:1064,12,0	1/1:10,0:9:15.05:977,15,0	1/1:17,3:19:36.11:2987,36,0	1/1:19,3:21:45.14:3060,45,0	1/1:13,7:19:33.11:3009,33,0	1/1:15,0:13:20.16:1466,20,0	1/1:18,5:20:36.03:2298,36,0	1/1:14,0:11:24.08:1327,24,0	1/1:8,0:8:9.03:862,9,0	1/1:13,9:21:27.09:1927,27,0	1/1:11,0:10:9.03:629,9,0	0/1:16,0:14:99:544,0,162	1/1:14,7:19:39.13:3248,39,0	1/1:14,0:10:24.06:1567,24,0	1/1:18,1:16:33.06:1784,33,0	1/1:4,0:3:9.03:357,9,0
chr10	62828346	.	T	TTC	18594.54	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=-14.247;DP=627;FS=0.958;HRun=0;HaplotypeScore=67.2812;InbreedingCoeff=0.9705;MQ=83.22;MQ0=0;MQRankSum=-2.899;QD=55.84;ReadPosRankSum=1.476;VQSLOD=5.2087;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:37:99:0,105,1631	0/0:5,0:5:15.05:0,15,241	0/0:28,0:28:75.22:0,75,1125	0/0:25,0:25:53.74:0,54,979	0/0:25,0:25:69.24:0,69,1118	1/1:0,21:22:57.20:1143,57,0	1/1:0,18:19:54.19:1097,54,0	0/0:33,0:32:90.31:0,90,1459	0/0:23,0:22:57.18:0,57,905	1/1:2,21:23:66.23:1304,66,0	1/1:1,24:25:72.25:1462,72,0	1/1:0,22:22:60.21:1218,60,0	1/1:0,20:20:57.20:1156,57,0	1/1:0,23:24:66.23:1325,66,0	1/1:0,30:31:84.29:1706,84,0	1/1:1,18:19:2.23:926,2,0	0/0:36,0:35:99:0,99,1614	0/0:23,0:23:69.24:0,69,1123	1/1:0,21:22:66.23:1339,66,0	1/1:0,21:22:63.15:1230,63,0	1/1:1,14:15:42.14:828,42,0	0/0:21,0:21:60.20:0,60,975	0/0:12,0:12:36.12:0,36,587	0/0:25,0:25:69.24:0,69,1124	1/1:2,15:17:45.15:913,45,0	1/1:0,15:15:45.15:876,45,0	1/1:0,25:24:69.24:1401,69,0	1/1:0,12:12:33.11:670,33,0
chr10	62832943	.	T	TA	369.35	PASS	AB=0.833;AC=11;AF=0.196;AN=56;BaseQRankSum=-6.046;DP=428;FS=8.250;HRun=15;HaplotypeScore=59.5930;InbreedingCoeff=0.5158;MQ=51.67;MQ0=22;MQRankSum=-0.397;QD=3.97;ReadPosRankSum=-0.035;VQSLOD=0.2756;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,4:31:0.95:0,1,94	0/1:3,0:3:0:0,0,0	0/0:5,0:3:5.74:0,6,30	0/0:10,0:4:2.93:0,3,18	0/0:22,0:22:10.74:0,11,70	0/0:22,0:22:41.06:0,41,250	0/0:8,0:8:14.67:0,15,90	0/1:26,4:29:4.71:60,0,5	0/0:4,0:6:6.11:0,6,18	0/0:18,0:16:26.40:0,26,161	0/0:20,0:20:29.06:0,29,219	0/0:12,0:15:20.08:0,20,114	0/0:11,0:11:23.41:0,23,143	0/0:8,0:8:5.81:0,6,35	0/0:13,0:13:23.31:0,23,136	0/0:18,0:18:34.98:0,35,255	1/1:8,13:17:20.98:176,21,0	0/1:8,12:23:15.50:180,0,15	0/0:18,0:16:28.33:0,28,159	0/0:15,0:15:23.45:0,23,143	0/0:7,0:5:11.69:0,12,68	1/1:1,2:2:3:25,3,0	1/1:4,5:8:5.95:44,6,0	1/1:0,3:3:3:25,3,0	0/0:19,0:19:11.65:0,12,128	0/0:22,0:21:26.34:0,26,161	0/0:27,0:26:31.13:0,31,227	0/0:16,0:13:26.45:0,26,161
chr10	62832957	.	A	AG	1794.37	PASS	AB=0.992;AC=27;AF=0.482;AN=56;BaseQRankSum=1.427;DP=433;FS=0.996;HRun=0;HaplotypeScore=60.6169;InbreedingCoeff=0.6014;MQ=65.40;MQ0=12;MQRankSum=2.807;QD=7.24;ReadPosRankSum=3.521;VQSLOD=3.1778;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:58.39:0,58,528	0/0:5,0:5:8.98:0,9,74	0/0:12,0:9:20.84:0,21,169	0/0:12,0:6:5.16:0,5,74	0/0:20,0:20:39.84:0,40,378	1/1:22,0:22:25.83:171,26,0	0/1:6,0:6:5.03:21,0,5	0/0:32,0:32:49:0,49,398	0/0:6,0:5:11.77:0,12,78	0/1:14,0:14:2.52:74,0,3	1/1:19,1:20:25.60:153,26,0	1/1:13,1:14:19.56:98,20,0	0/1:10,0:10:17.85:39,0,18	1/1:3,0:3:3.58:10,4,0	1/1:15,0:15:27.73:189,28,0	1/1:21,1:22:26.72:178,27,0	0/0:18,0:16:3.91:0,4,38	0/0:26,0:25:30.36:0,30,261	0/1:20,0:18:11.72:172,0,12	1/1:19,0:19:18.17:154,18,0	1/1:12,0:11:24.65:167,25,0	0/0:6,0:5:13.20:0,13,103	0/0:12,0:11:7.82:0,8,58	0/0:5,0:5:3.44:0,3,21	1/1:13,1:14:23.14:143,23,0	1/1:22,0:21:37.77:234,38,0	0/1:22,1:21:3.78:113,0,4	1/1:12,0:11:17.09:76,17,0
chr10	62834320	.	G	GA	667.78	PASS	AB=0.777;AC=4;AF=0.071;AN=56;BaseQRankSum=-5.031;DP=657;FS=2.146;HRun=11;HaplotypeScore=67.6636;InbreedingCoeff=0.5088;MQ=67.21;MQ0=8;MQRankSum=-1.042;QD=7.10;ReadPosRankSum=0.129;VQSLOD=2.0907;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,27:34:48.10:487,48,0	0/0:12,0:12:30.77:0,31,234	0/1:37,0:15:11.29:11,0,82	0/0:27,0:14:17.48:0,17,120	0/1:6,16:22:7.43:283,0,7	0/0:26,1:28:28.33:0,28,390	0/0:16,1:17:17.35:0,17,315	0/0:27,0:27:59.71:0,60,458	0/0:19,0:20:46.85:0,47,354	0/0:21,0:22:40.82:0,41,306	0/0:11,0:11:25.13:0,25,188	0/0:25,0:26:47.27:0,47,369	0/0:22,0:22:42.24:0,42,326	0/0:28,0:28:67.98:0,68,528	0/0:18,1:19:10.98:0,11,258	0/0:22,0:22:17.42:0,17,316	0/0:31,0:31:72.16:0,72,558	0/0:25,0:25:62.74:0,63,487	0/0:28,0:28:55.52:0,56,421	0/0:15,0:15:32.59:0,33,243	0/0:31,0:31:80.68:0,81,626	0/0:22,0:21:23.20:0,23,350	0/0:22,0:22:39.21:0,39,289	0/0:31,1:33:44.44:0,44,590	0/0:14,0:14:26.48:0,26,195	0/0:17,0:17:41.80:0,42,324	0/0:17,0:19:40.64:0,41,304	0/0:22,0:21:44.79:0,45,348
chr10	62834750	.	A	AC	14933.33	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=-16.118;DP=759;FS=0.590;HRun=6;HaplotypeScore=67.3819;InbreedingCoeff=0.9998;MQ=81.95;MQ0=0;MQRankSum=-0.034;QD=32.05;ReadPosRankSum=3.210;VQSLOD=5.1267;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,123,1253	0/0:15,0:15:39.09:0,39,398	0/0:23,0:23:60.13:0,60,609	0/0:17,0:17:45.06:0,45,447	0/0:13,0:13:39.09:0,39,397	1/1:3,23:26:63.20:792,63,0	1/1:7,39:46:99:1379,111,0	0/0:37,0:37:99:0,105,1067	0/0:23,0:23:57.11:0,57,574	1/1:0,17:17:48.14:591,48,0	1/1:0,12:12:33.11:415,33,0	1/1:2,19:21:42.13:528,42,0	1/1:1,45:47:99:1621,129,0	1/1:3,33:36:84.24:1057,84,0	1/1:1,31:32:84.27:1057,84,0	1/1:2,29:31:78.25:981,78,0	0/0:39,0:39:99:0,105,1070	0/0:20,0:20:54.08:0,54,540	1/1:3,27:30:84.27:1054,84,0	1/1:0,19:19:57.14:695,57,0	1/1:6,46:52:99:1622,129,0	0/0:18,0:18:36.07:0,36,366	0/0:14,0:14:30.05:0,30,298	0/0:28,0:28:78.18:0,78,795	1/1:3,18:21:51.16:638,51,0	1/1:1,22:23:60.16:734,60,0	1/1:1,34:35:99:1241,99,0	1/1:3,15:18:42.13:528,42,0
chr10	62834999	.	T	TA	6467.22	PASS	AB=1.000;AC=33;AF=0.589;AN=56;BaseQRankSum=-1.123;DP=526;FS=1.200;HRun=8;HaplotypeScore=94.8853;InbreedingCoeff=0.9310;MQ=65.89;MQ0=5;MQRankSum=-1.059;QD=21.63;ReadPosRankSum=1.588;VQSLOD=4.9338;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:84:0,84,758	0/0:11,0:11:29.98:0,30,258	0/0:16,0:11:19.38:0,19,170	0/1:13,0:7:8.65:9,0,90	0/0:32,0:32:68.97:0,69,619	1/1:16,5:21:52.33:515,52,0	1/1:13,2:15:35.84:334,36,0	0/0:38,0:37:93.03:0,93,836	0/0:12,0:12:32.99:0,33,287	1/1:18,1:19:42.03:423,42,0	1/1:13,2:14:31.29:297,31,0	1/1:15,3:17:42.03:406,42,0	1/1:14,1:15:35.99:334,36,0	1/1:9,0:9:15.02:143,15,0	1/1:18,3:21:48.10:490,48,0	1/1:17,0:17:40.30:382,40,0	0/0:25,0:25:57.02:0,57,506	0/0:19,0:19:44.98:0,45,392	1/1:11,2:11:23.63:227,24,0	1/1:13,2:15:39.06:382,39,0	1/1:12,0:12:23.92:209,24,0	0/0:12,0:12:26.96:0,27,242	0/0:14,0:14:29.95:0,30,260	0/0:13,0:12:32.87:0,33,275	1/1:23,2:25:65.95:630,66,0	1/1:19,5:22:62.98:647,63,0	1/1:31,2:31:66.07:653,66,0	1/1:12,2:14:41.55:386,42,0
chr10	62835007	.	AT	A	7569.02	PASS	AB=1.000;AC=33;AF=0.589;AN=56;BaseQRankSum=-0.442;DP=536;FS=2.087;HRun=1;HaplotypeScore=89.5796;InbreedingCoeff=0.9229;MQ=69.60;MQ0=4;MQRankSum=1.460;QD=24.42;ReadPosRankSum=0.823;VQSLOD=4.8690;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:90.23:0,90,1219	0/0:11,0:11:27.51:0,28,145	0/0:20,0:15:40.86:0,41,398	0/0:15,0:10:1.37:0,1,181	0/0:27,0:27:72.19:0,72,995	1/1:6,15:21:50.79:545,51,0	1/1:3,14:17:32.75:385,33,0	0/0:39,0:37:91.17:0,91,800	0/0:13,0:13:32:0,32,229	1/1:1,14:15:44.79:549,45,0	1/1:2,14:15:33.47:368,33,0	1/1:3,16:18:40.48:443,40,0	1/1:1,18:19:35.71:457,36,0	1/1:1,8:9:17.95:219,18,0	1/1:4,17:21:46.17:495,46,0	1/1:1,16:17:39.55:464,40,0	0/0:22,0:22:54.23:0,54,335	0/0:19,0:19:42.58:0,43,310	1/1:2,8:11:28.35:240,28,0	1/1:2,14:16:44.11:498,44,0	1/1:1,13:14:23.93:301,24,0	0/1:15,0:15:1.63:2,0,135	0/0:15,0:15:26.69:0,27,240	0/0:13,0:12:26.74:0,27,171	1/1:2,21:24:64.41:740,64,0	1/1:5,23:27:74.86:667,75,0	1/1:2,28:29:63.93:687,64,0	1/1:2,16:18:41.48:510,41,0
chr10	62835008	.	TAG	T	9150.32	PASS	AB=1.000;AC=49;AF=0.875;AN=56;BaseQRankSum=7.255;DP=540;FS=4.052;HRun=0;HaplotypeScore=94.2943;InbreedingCoeff=0.8582;MQ=69.50;MQ0=4;MQRankSum=0.409;QD=19.76;ReadPosRankSum=0.754;VQSLOD=5.0501;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:75.26:0,75,1213	1/1:0,10:10:27.08:330,27,0	0/0:19,1:15:28.87:0,29,403	0/1:15,0:10:6.99:7,0,240	0/0:26,0:26:66.21:0,66,1020	1/1:22,0:22:39.05:384,39,0	1/1:16,1:17:30.06:307,30,0	1/1:16,23:37:63.16:744,63,0	1/1:2,10:12:24.08:293,24,0	1/1:16,0:16:45.07:471,45,0	1/1:16,0:15:32.90:305,33,0	1/1:19,0:18:30.04:287,30,0	1/1:19,0:19:33.02:318,33,0	1/1:8,1:9:18.04:187,18,0	1/1:22,0:22:33.08:340,33,0	1/1:19,0:19:39.06:389,39,0	1/1:3,18:22:50.48:573,50,0	1/1:4,15:19:33.10:403,33,0	1/1:11,0:11:21.03:221,21,0	1/1:17,0:17:42.08:429,42,0	1/1:13,0:14:22.28:210,22,0	1/1:1,14:15:30.09:361,30,0	1/1:5,10:15:18.06:220,18,0	1/1:1,11:11:27.08:330,27,0	1/1:24,0:24:53.94:534,54,0	1/1:28,0:27:60.15:661,60,0	1/1:30,0:28:45.06:440,45,0	1/1:21,0:21:44.62:408,45,0
chr10	62836222	.	T	TC	14028.03	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-14.354;DP=656;FS=9.100;HRun=4;HaplotypeScore=65.4661;InbreedingCoeff=0.9941;MQ=79.95;MQ0=0;MQRankSum=-2.876;QD=35.16;ReadPosRankSum=2.842;VQSLOD=5.1893;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,120,1360	0/0:5,0:5:12.03:0,12,136	0/0:18,0:18:45.11:0,45,489	0/0:17,0:18:18.10:0,18,271	0/0:23,0:23:57.16:0,57,647	1/1:3,26:29:78.26:1058,78,0	1/1:5,23:28:66.22:903,66,0	0/0:33,0:33:78.22:0,78,885	1/1:0,21:21:54.18:738,54,0	1/1:2,17:19:51.16:680,51,0	1/1:1,10:11:30.10:409,30,0	1/1:4,21:25:54.18:731,54,0	1/1:1,16:17:39.13:528,39,0	1/1:3,20:23:51.17:698,51,0	1/1:2,27:29:78.26:1065,78,0	1/1:1,32:33:87.29:1190,87,0	0/0:34,0:34:99:0,99,1113	0/0:21,0:21:60.14:0,60,667	1/1:2,20:22:60.19:804,60,0	1/1:0,10:10:27.09:369,27,0	1/1:0,45:45:99:1681,123,0	0/0:25,0:25:66.17:0,66,740	0/0:16,0:16:45.13:0,45,506	0/0:23,0:23:63.14:0,63,700	1/1:0,23:23:57.19:780,57,0	1/1:1,31:32:93.29:1253,93,0	1/1:1,21:21:57.19:771,57,0	1/1:0,10:10:27.09:369,27,0
chr10	62838011	.	TGCACACACACACACGCACGCACGCAC	T	1424.71	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=4.653;DP=756;FS=0.000;HRun=0;HaplotypeScore=488.7422;InbreedingCoeff=0.9012;MQ=65.48;MQ0=2;MQRankSum=-3.330;QD=25.44;ReadPosRankSum=-2.403;VQSLOD=-0.0708;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:10,35:45:21.07:1209,21,0	0/0:12,0:12:33.04:0,33,2287	0/0:18,0:13:12.34:0,12,886	0/0:28,0:18:23.87:0,24,967	1/1:2,9:11:9.03:328,9,0	0/0:26,0:26:66.23:0,66,6102	0/0:29,0:29:62.72:0,63,5464	0/0:23,0:23:62.55:0,63,3654	0/0:31,0:31:69.24:0,69,6601	0/0:34,0:34:90.30:0,90,7053	0/0:16,0:16:39.10:0,39,3381	0/0:27,0:27:62.54:0,63,6053	0/0:29,0:29:57.19:0,57,4698	0/0:29,0:28:57.77:0,58,6355	0/0:30,0:29:66.23:0,66,6219	0/0:31,0:31:72.15:0,72,6497	0/0:40,0:40:96.27:0,96,7896	0/0:16,0:16:45.15:0,45,5206	0/0:23,0:22:36.11:0,36,2622	0/0:23,0:23:63.11:0,63,5984	0/0:61,0:61:99:0,141,10513	0/0:30,0:30:41.26:0,41,6027	0/0:22,0:22:57.18:0,57,5020	0/0:39,0:39:93.29:0,93,7756	0/0:22,0:22:57.19:0,57,4804	0/0:28,0:27:78.27:0,78,6919	0/0:29,0:28:60.41:0,60,5089	0/0:4,0:4:6.02:0,6,420
chr10	62838036	.	ACG	A	2016.74	PASS	AB=0.939;AC=20;AF=0.357;AN=56;BaseQRankSum=-4.394;DP=715;FS=3.127;HRun=0;HaplotypeScore=145.0261;InbreedingCoeff=-0.2848;MQ=59.03;MQ0=5;MQRankSum=0.828;QD=4.24;ReadPosRankSum=-8.071;VQSLOD=0.1976;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:35,0:35:13.99:68,14,0	0/0:12,0:12:33.05:0,33,462	0/0:21,0:11:12.22:0,12,262	0/0:22,0:11:5.65:0,6,144	1/1:9,0:9:5.55:29,6,0	0/1:25,4:29:99:263,0,195	0/1:23,4:27:54.88:55,0,320	0/0:32,0:32:72.58:0,73,1049	0/0:28,0:28:62.35:0,62,1014	0/1:30,2:32:99:184,0,337	0/1:18,0:18:58.51:59,0,183	0/1:30,2:32:99:186,0,422	0/1:20,1:21:99:106,0,267	0/1:26,2:27:99:246,0,267	0/1:27,0:26:86.14:86,0,315	0/1:28,1:29:89.11:89,0,407	0/0:31,0:31:87.07:0,87,1403	0/0:19,0:19:40.77:0,41,886	0/1:19,0:18:21.42:21,0,210	0/1:24,1:25:51.36:51,0,344	0/1:47,2:49:99:263,0,438	0/0:23,0:23:30.14:0,30,825	0/0:18,0:18:27.69:0,28,673	0/0:33,0:33:75.83:0,76,1435	0/1:19,3:22:53.36:53,0,349	0/1:32,2:33:99:211,0,256	0/1:24,4:27:99:179,0,263	0/1:11,1:12:36.55:37,0,182
chr10	62838060	.	A	AT	11659.94	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=0.625;DP=716;FS=2.705;HRun=9;HaplotypeScore=113.1842;InbreedingCoeff=0.9993;MQ=66.11;MQ0=4;MQRankSum=0.504;QD=25.13;ReadPosRankSum=1.491;VQSLOD=4.2525;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:65.95:0,66,573	0/0:9,0:9:23.98:0,24,208	0/0:23,0:15:33.88:0,34,259	0/0:17,0:13:23.77:0,24,194	0/0:16,0:16:44.97:0,45,386	1/1:3,22:25:54.15:597,54,0	1/1:3,20:23:60.16:664,60,0	0/0:34,0:34:86.94:0,87,753	1/1:5,23:28:51.14:564,51,0	1/1:6,25:32:71.25:824,71,0	1/1:2,15:17:42.11:465,42,0	1/1:3,26:29:69.18:756,69,0	1/1:2,20:22:60.12:650,60,0	1/1:4,23:27:70.96:755,71,0	1/1:3,25:28:49.15:770,49,0	1/1:5,29:34:38.13:877,38,0	0/0:26,0:26:56.97:0,57,495	0/0:19,0:19:47.98:0,48,416	1/1:6,13:20:41.93:435,42,0	1/1:3,18:22:55.42:573,55,0	1/1:9,35:44:99:1133,104,0	0/0:19,0:19:50.98:0,51,443	0/0:20,0:20:56.97:0,57,491	0/0:32,0:33:88.98:0,89,758	1/1:7,21:28:37.11:638,37,0	1/1:12,25:37:46.13:730,46,0	1/1:4,24:27:62.96:664,63,0	1/1:1,19:20:52.02:566,52,0
chr10	62838217	.	A	ATG	646.27	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=7.271;DP=890;FS=1.642;HRun=0;HaplotypeScore=127.6354;InbreedingCoeff=0.6459;MQ=58.73;MQ0=3;MQRankSum=-4.490;QD=10.59;ReadPosRankSum=-1.835;VQSLOD=3.3407;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:35:38.71:0,39,552	0/0:10,0:10:27.08:0,27,332	0/1:23,0:10:6.67:7,0,98	0/0:30,0:15:24.39:0,24,300	0/0:25,0:25:49.61:0,50,690	0/0:30,0:31:66.01:0,66,763	0/0:18,0:18:25.15:0,25,483	0/0:58,0:55:99:0,129,1534	1/1:11,24:37:9.99:730,10,0	0/0:54,0:55:99:0,107,1498	0/0:23,0:23:57.18:0,57,701	0/0:40,0:40:99:0,111,1348	0/0:42,0:42:99:0,102,1252	0/0:29,0:29:72.18:0,72,846	0/0:51,0:51:99:0,123,1498	0/0:52,0:53:99:0,126,1502	0/0:21,0:21:42.13:0,42,516	0/0:19,0:19:48.09:0,48,558	0/0:18,0:17:34.16:0,34,426	0/0:27,0:27:75.23:0,75,917	0/0:36,0:35:78.21:0,78,933	0/0:25,0:25:54.17:0,54,664	0/0:20,0:20:51.15:0,51,615	0/0:38,0:38:67.58:0,68,1047	0/0:25,0:25:63.18:0,63,761	0/0:47,0:47:99:0,114,1373	0/0:36,0:35:81.22:0,81,970	0/0:17,0:17:39.12:0,39,479
chr10	62839253	.	CAG	C	3476.74	PASS	AB=0.985;AC=45;AF=0.804;AN=56;BaseQRankSum=3.192;DP=507;FS=4.525;HRun=0;HaplotypeScore=102.1457;InbreedingCoeff=0.3320;MQ=56.82;MQ0=12;MQRankSum=-1.740;QD=7.78;ReadPosRankSum=5.019;VQSLOD=2.5521;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:28,1:28:45.81:371,46,0	1/1:9,0:9:24.11:161,24,0	0/0:24,0:15:14.96:0,15,416	0/0:24,0:11:24.07:0,24,388	0/1:11,1:12:2.40:102,0,2	1/1:19,0:19:8.92:67,9,0	1/1:26,0:26:3.78:65,4,0	0/1:22,0:21:31:185,0,31	1/1:3,0:16:5.94:43,6,0	1/1:11,0:10:25.09:184,25,0	0/1:16,0:15:0:0,0,0	1/1:19,0:19:6.34:46,6,0	1/1:1,10:10:2.96:19,3,0	1/1:9,1:10:8.97:73,9,0	1/1:22,0:22:7.60:88,8,0	1/1:18,2:20:33.58:312,34,0	1/1:33,0:33:23.60:141,24,0	1/1:27,0:27:38.08:233,38,0	1/1:8,0:8:18.57:123,19,0	0/1:14,0:14:9.07:157,0,9	1/1:21,0:18:1.89:44,2,0	1/1:16,0:14:20.68:147,21,0	1/1:9,1:10:5.88:37,6,0	0/1:36,0:36:11.07:231,0,11	0/0:12,0:12:1.39:0,1,4	1/1:11,0:11:25.94:238,26,0	1/1:16,1:16:26.87:237,27,0	1/1:12,0:10:22.89:170,23,0
chr10	62839255	.	GAC	G	2997.96	PASS	AB=1.000;AC=39;AF=0.696;AN=56;BaseQRankSum=1.625;DP=497;FS=16.886;HRun=0;HaplotypeScore=102.5687;InbreedingCoeff=0.2043;MQ=56.33;MQ0=13;MQRankSum=-1.957;QD=7.33;ReadPosRankSum=3.572;VQSLOD=2.0159;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:25:0.33:0,0,60	1/1:4,5:9:4.12:296,4,0	0/0:22,0:13:21.03:0,21,278	0/0:23,0:10:21.07:0,21,321	0/1:12,0:12:2.74:7,0,3	0/1:19,0:19:0:0,0,0	1/1:24,0:24:5.86:37,6,0	1/1:5,14:18:45.08:576,45,0	1/1:17,0:17:7.82:82,8,0	0/1:14,0:13:2.98:3,0,32	0/0:17,0:16:2.97:0,3,24	0/1:20,0:20:12.75:13,0,14	1/1:10,0:9:0.47:1,0,0	1/1:10,0:10:4.93:19,5,0	1/1:22,0:22:5.09:26,5,0	1/1:20,0:20:4.47:67,4,0	1/1:4,29:32:25.68:338,26,0	1/1:1,25:26:21.20:508,21,0	0/1:11,0:11:8.87:9,0,52	0/1:14,0:14:8.56:9,0,30	0/1:21,0:18:13.06:27,0,13	1/1:4,13:14:21.07:281,21,0	1/1:2,8:10:6.02:82,6,0	1/1:4,31:35:48.15:645,48,0	1/1:10,0:10:2.90:16,3,0	0/1:11,0:11:8.54:9,0,34	0/1:15,0:14:6.72:58,0,7	1/1:10,0:8:8.90:45,9,0
chr10	62839261	.	CAGACACAG	C	5719.29	PASS	AB=0.884;AC=44;AF=0.786;AN=56;BaseQRankSum=-0.007;DP=506;FS=17.691;HRun=0;HaplotypeScore=127.0240;InbreedingCoeff=-0.0292;MQ=54.72;MQ0=13;MQRankSum=0.098;QD=11.74;ReadPosRankSum=1.336;VQSLOD=2.6795;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:23:40.33:549,40,0	0/1:10,0:10:24.44:89,0,24	0/1:14,0:7:16.05:16,0,123	0/0:19,0:9:14.90:0,15,227	1/1:15,0:15:23.93:298,24,0	1/1:0,16:16:3.01:65,3,0	1/1:0,0:21:6.02:86,6,0	0/1:16,0:16:6.44:103,0,6	1/1:19,0:19:11.88:196,12,0	1/1:3,13:15:10.18:394,10,0	0/1:1,16:16:0:0,0,0	1/1:3,18:21:8.43:200,8,0	1/1:11,0:11:8.94:67,9,0	1/1:1,9:10:6.02:158,6,0	1/1:0,18:19:5.79:130,6,0	1/1:16,3:21:50.88:786,51,0	0/1:34,0:33:52.53:158,0,53	0/1:30,0:30:75.20:75,0,140	0/1:3,0:12:1.85:290,0,2	1/1:15,0:15:23.50:260,24,0	1/1:7,0:17:6.02:111,6,0	0/1:19,0:17:38.75:158,0,39	0/1:11,0:12:7.90:8,0,19	0/1:33,0:33:58.27:215,0,58	1/1:1,0:11:2.57:42,3,0	1/1:17,0:17:27.71:488,28,0	1/1:16,1:17:41.63:508,42,0	1/1:10,0:8:21.03:269,21,0
chr10	62839269	.	GACACAC	G	748.63	PASS	AB=0.955;AC=19;AF=0.365;AN=52;BaseQRankSum=4.629;DP=516;FS=1.770;HRun=0;HaplotypeScore=141.8667;InbreedingCoeff=-0.0698;MQ=53.56;MQ0=15;MQRankSum=-4.292;QD=2.25;ReadPosRankSum=6.363;VQSLOD=1.9246;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:23:17.20:0,17,131	0/1:6,0:10:59.84:60,0,61	./.	./.	0/1:19,0:18:21.59:22,0,69	1/1:16,0:16:2.50:9,2,0	0/0:21,0:21:8.92:0,9,63	0/0:12,0:11:7.91:0,8,51	0/1:19,0:19:5.04:5,0,38	0/1:17,0:16:2.45:2,0,147	0/1:17,0:16:0:0,0,0	0/1:22,0:22:34.59:44,0,35	0/0:13,0:11:5.47:0,5,40	1/1:10,0:10:6.01:56,6,0	0/1:19,0:19:16.70:24,0,17	0/1:24,0:24:49.34:49,0,139	0/1:32,2:34:54.95:108,0,55	0/1:30,0:33:29.17:29,0,240	0/0:18,0:16:24.84:0,25,163	0/0:17,0:17:9.82:0,10,91	0/0:23,0:20:2.77:0,3,22	0/1:21,2:22:4.35:199,0,4	0/1:13,0:13:4.59:29,0,5	1/1:28,2:32:15.94:246,16,0	0/0:9,0:9:2.99:0,3,24	0/0:15,0:15:20.18:0,20,186	0/1:21,0:19:15.55:16,0,146	0/0:11,0:9:11:0,11,75
chr10	62841084	.	TA	T	781.53	PASS	AB=0.874;AC=35;AF=0.875;AN=40;BaseQRankSum=1.707;DP=76;FS=24.150;HRun=1;HaplotypeScore=42.3798;InbreedingCoeff=-0.1067;MQ=69.80;MQ0=5;MQRankSum=-3.102;QD=11.16;ReadPosRankSum=3.815;VQSLOD=0.0196;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,0:7:17.96:144,18,0	./.	0/1:3,2:3:14.98:36,0,15	0/1:9,1:7:22.96:34,0,23	1/1:2,0:2:5.99:50,6,0	1/1:2,0:1:2.99:24,3,0	1/1:6,0:5:11.88:87,12,0	1/1:2,0:1:2.98:22,3,0	1/1:2,0:2:3.46:25,3,0	1/1:2,0:2:2.40:20,2,0	1/1:2,0:2:3:25,3,0	1/1:2,0:2:3:26,3,0	./.	./.	1/1:1,0:1:2.99:24,3,0	1/1:3,0:2:5.98:46,6,0	1/1:3,0:3:8.99:75,9,0	1/1:4,0:4:11.93:89,12,0	1/1:3,0:1:2.98:22,3,0	./.	1/1:5,1:5:9.45:72,9,0	./.	./.	1/1:4,1:5:4.47:46,4,0	./.	0/1:2,0:2:15.93:16,0,17	0/0:2,0:1:0.47:0,0,1	./.
chr10	62841085	.	AG	A	1449.59	PASS	AB=1.000;AC=38;AF=0.950;AN=40;BaseQRankSum=-0.776;DP=74;FS=7.002;HRun=1;HaplotypeScore=41.4323;InbreedingCoeff=-0.1371;MQ=76.45;MQ0=4;MQRankSum=-0.957;QD=20.42;ReadPosRankSum=2.546;VQSLOD=3.5397;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,8:7:18.06:251,18,0	./.	0/1:6,0:4:11.93:12,0,74	0/1:9,0:6:4.69:16,0,5	1/1:0,2:2:6.02:84,6,0	1/1:0,2:1:3.01:42,3,0	1/1:0,6:5:12.04:159,12,0	1/1:0,1:1:3.01:42,3,0	1/1:0,2:2:5.98:62,6,0	1/1:1,1:2:5.99:63,6,0	1/1:0,2:2:3.01:42,3,0	1/1:0,2:2:3.01:42,3,0	./.	./.	1/1:0,1:1:3.01:42,3,0	1/1:0,3:2:6.02:84,6,0	1/1:0,3:3:9.03:125,9,0	1/1:0,4:4:12.04:167,12,0	1/1:0,3:1:3.01:42,3,0	./.	1/1:2,4:5:9.50:126,10,0	./.	./.	1/1:2,3:5:4.50:81,5,0	./.	1/1:1,1:2:3.01:42,3,0	1/1:1,1:1:2.92:17,3,0	./.
chr10	62841097	.	GA	G	1009.73	PASS	AB=0.833;AC=29;AF=0.906;AN=32;BaseQRankSum=-1.246;DP=62;FS=14.624;HRun=1;HaplotypeScore=36.1478;InbreedingCoeff=-0.0029;MQ=81.99;MQ0=5;MQRankSum=-0.040;QD=21.95;ReadPosRankSum=0.603;VQSLOD=2.0903;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,6:5:15.05:196,15,0	./.	0/1:8,2:3:22.73:49,0,23	0/0:8,1:6:1.38:0,1,8	1/1:0,2:2:3.01:42,3,0	1/1:0,2:1:3.01:42,3,0	./.	1/1:0,1:1:3.01:42,3,0	1/1:0,1:1:3.01:42,3,0	1/1:0,1:1:3.01:42,3,0	1/1:0,1:1:3.01:42,3,0	./.	./.	./.	1/1:0,1:1:3.01:42,3,0	1/1:0,3:2:6.02:83,6,0	1/1:0,3:3:9.03:125,9,0	1/1:0,3:3:9.03:118,9,0	./.	./.	1/1:1,7:7:5.90:71,6,0	./.	./.	1/1:0,3:3:9.03:122,9,0	./.	1/1:0,1:1:3.01:42,3,0	./.	./.
chr10	62841103	.	GT	G	904.68	PASS	AB=0.721;AC=28;AF=0.933;AN=30;BaseQRankSum=-0.537;DP=67;FS=11.461;HRun=1;HaplotypeScore=32.8218;InbreedingCoeff=-0.1500;MQ=84.67;MQ0=6;MQRankSum=-0.895;QD=17.40;ReadPosRankSum=-0.465;VQSLOD=2.1680;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,6:5:9.03:125,9,0	./.	0/1:5,9:4:15.52:59,0,16	0/1:8,2:6:7.90:8,0,12	1/1:0,1:1:3.01:41,3,0	1/1:0,2:1:3.01:42,3,0	./.	1/1:0,3:3:9.03:119,9,0	1/1:0,1:1:3.01:42,3,0	1/1:0,1:1:3.01:42,3,0	1/1:0,1:1:3.01:41,3,0	./.	./.	./.	1/1:0,1:1:3.01:41,3,0	1/1:0,3:2:6.02:83,6,0	1/1:0,3:3:9.03:125,9,0	1/1:0,2:2:6.02:83,6,0	./.	./.	./.	./.	./.	1/1:1,2:3:8.96:100,9,0	./.	1/1:0,1:1:3.01:42,3,0	./.	./.
chr10	62841126	.	CG	C	537.97	PASS	AB=0.972;AC=24;AF=0.923;AN=26;BaseQRankSum=0.246;DP=69;FS=16.298;HRun=1;HaplotypeScore=37.0079;InbreedingCoeff=-0.0489;MQ=119.60;MQ0=5;MQRankSum=-2.066;QD=8.28;ReadPosRankSum=1.820;VQSLOD=-0.7601;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,5:4:6.02:77,6,0	1/1:0,1:1:3.01:40,3,0	0/1:24,0:10:2.39:2,0,166	0/1:16,1:8:9.42:9,0,90	./.	./.	./.	1/1:0,3:3:9.03:125,9,0	1/1:0,1:1:3.01:41,3,0	./.	1/1:0,1:1:3:29,3,0	./.	./.	./.	./.	1/1:0,2:1:3:29,3,0	1/1:0,1:1:3.01:41,3,0	1/1:0,2:2:3.01:41,3,0	1/1:0,4:3:6.02:74,6,0	./.	./.	./.	./.	1/1:0,2:2:6.02:82,6,0	./.	1/1:0,2:2:3.89:33,4,0	./.	./.
chr10	62841137	.	AGGG	A	272.59	PASS	AB=0.670;AC=10;AF=0.625;AN=16;BaseQRankSum=0.038;DP=73;FS=6.662;HRun=3;HaplotypeScore=28.1960;MQ=116.25;MQ0=4;MQRankSum=-1.852;QD=11.85;ReadPosRankSum=1.625;VQSLOD=0.1209;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,1:6:6.02:79,6,0	1/1:0,0:1:3.01:51,3,0	0/0:20,0:9:10.23:0,10,166	0/0:19,0:6:5.51:0,6,56	./.	./.	1/1:0,2:2:3.01:46,3,0	0/1:3,2:5:51.29:70,0,51	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	0/1:2,0:3:3.73:22,0,4	./.	./.	./.	./.	./.	./.	1/1:0,3:2:6.02:96,6,0	./.	./.
chr10	62842228	.	TA	T	1017.92	PASS	AB=0.804;AC=35;AF=0.700;AN=50;BaseQRankSum=0.187;DP=282;FS=17.975;HRun=11;HaplotypeScore=26.0712;InbreedingCoeff=0.4867;MQ=52.32;MQ0=118;MQRankSum=2.160;QD=5.41;ReadPosRankSum=-0.229;VQSLOD=-0.0282;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:19,2:9:3.62:4,0,159	0/0:6,0:3:6.02:0,6,64	1/1:7,1:4:2.36:20,2,0	0/0:10,0:7:5.27:0,5,45	0/0:15,0:8:20.83:0,21,162	0/0:1,11:7:0:0,0,0	1/1:3,10:3:2.99:25,3,0	0/1:5,0:2:0.84:1,0,27	1/1:2,4:3:5.99:49,6,0	1/1:1,7:5:11.99:99,12,0	./.	1/1:6,6:6:8.97:74,9,0	1/1:0,5:4:5.99:49,6,0	1/1:1,8:7:11.99:98,12,0	0/1:4,5:5:22.96:40,0,23	1/1:0,10:7:3:25,3,0	0/0:18,0:12:30.08:0,30,320	0/0:12,2:9:17.63:0,18,191	1/1:3,11:8:23.93:191,24,0	1/1:1,7:6:11.98:98,12,0	1/1:5,11:6:8.99:74,9,0	1/1:0,0:3:3.63:10,4,0	./.	./.	1/1:1,11:6:5.28:48,5,0	1/1:4,10:8:20.97:172,21,0	1/1:1,8:4:5.99:49,6,0	1/1:0,3:3:5.99:49,6,0
chr10	62843506	.	A	AAGTC	1826.14	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-1.162;DP=846;FS=13.748;HRun=0;HaplotypeScore=150.7948;InbreedingCoeff=0.9997;MQ=80.55;MQ0=0;MQRankSum=-4.751;QD=60.87;ReadPosRankSum=-0.451;VQSLOD=4.3091;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:62,0:62:99:0,181,3291	0/0:15,0:15:39.08:0,39,660	0/0:23,0:23:60.20:0,60,1033	0/0:23,0:23:54.05:0,54,926	0/0:28,0:28:72.18:0,72,1232	0/0:16,0:16:42.10:0,42,747	0/0:29,0:29:75.22:0,75,1363	0/0:51,0:51:99:0,126,2251	1/1:6,23:30:75.26:1921,75,0	0/0:28,0:28:69.23:0,69,1251	0/0:22,0:22:54.13:0,54,937	0/0:44,0:44:99:0,126,2351	0/0:38,0:38:99:0,99,1718	0/0:38,0:38:99:0,114,2121	0/0:44,0:44:99:0,120,2240	0/0:30,0:30:78.27:0,78,1454	0/0:43,0:43:99:0,114,2048	0/0:23,0:23:66.08:0,66,1160	0/0:17,0:17:51.15:0,51,873	0/0:28,0:28:72.25:0,72,1337	0/0:39,0:39:99:0,102,1835	0/0:20,0:20:60.19:0,60,1084	0/0:19,0:19:50.99:0,51,897	0/0:38,0:38:99:0,102,1851	0/0:14,0:14:36.12:0,36,666	0/0:36,0:36:99:0,105,1928	0/0:32,0:32:87.30:0,87,1605	0/0:16,0:16:45.15:0,45,840
chr10	62844489	.	T	TG	1484.52	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-6.986;DP=676;FS=10.819;HRun=5;HaplotypeScore=67.1347;InbreedingCoeff=0.9870;MQ=84.14;MQ0=0;MQRankSum=-4.410;QD=27.49;ReadPosRankSum=-0.569;VQSLOD=2.7465;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,27:36:78.25:1019,78,0	0/0:12,0:12:33.08:0,33,355	0/0:19,0:19:57.12:0,57,589	0/0:21,0:21:46.41:0,46,531	1/1:1,17:18:45.15:587,45,0	0/0:29,0:29:72.15:0,72,758	0/0:21,0:21:63.10:0,63,651	0/0:33,0:33:72.15:0,72,756	0/0:35,0:35:99:0,99,1037	0/0:27,0:27:78.20:0,78,838	0/0:6,0:6:18.05:0,18,193	0/0:40,0:40:99:0,114,1225	0/0:22,0:22:57.13:0,57,605	0/0:21,0:21:60.15:0,60,645	0/0:28,0:28:72.18:0,72,774	0/0:26,0:26:75.16:0,75,789	0/0:40,0:40:99:0,114,1198	0/0:29,0:29:81.17:0,81,859	0/0:17,0:17:51.10:0,51,534	0/0:6,0:6:15.04:0,15,161	0/0:38,0:38:99:0,99,1057	0/0:17,0:17:45.11:0,45,483	0/0:11,0:11:27.07:0,27,290	0/0:37,0:37:99:0,105,1122	0/0:23,0:23:60.13:0,60,637	0/0:23,0:23:63.03:0,63,660	0/0:30,0:30:84.18:0,84,892	0/0:11,0:11:33.08:0,33,355
chr10	62845351	.	AAGATAGATAGATAGATAAATAGATAGAT	A	9286.92	PASS	AB=0.588;AC=29;AF=0.537;AN=54;BaseQRankSum=8.844;DP=727;FS=0.000;HRun=0;HaplotypeScore=418.3809;InbreedingCoeff=0.7991;MQ=67.99;MQ0=7;MQRankSum=-5.009;QD=27.72;ReadPosRankSum=2.350;VQSLOD=1.9138;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,105,4195	0/0:15,0:15:22.77:0,23,796	0/0:22,0:18:20.09:0,20,226	0/0:27,0:18:0.90:0,1,121	0/0:32,0:32:71.96:0,72,2133	1/1:3,13:15:3.01:182,3,0	1/1:24,0:24:21.03:412,21,0	0/0:50,0:48:84.25:0,84,2892	0/0:34,0:34:84.23:0,84,6331	1/1:31,2:33:71.56:2088,72,0	0/1:3,7:10:0:0,0,0	1/1:23,4:27:30.04:1315,30,0	1/1:5,20:24:8.56:653,9,0	1/1:11,13:23:12.04:673,12,0	1/1:8,22:29:6.02:314,6,0	1/1:7,21:27:3.01:187,3,0	0/0:36,0:36:54.02:0,54,1966	0/0:30,0:30:40.27:0,40,4982	1/1:11,13:22:36.05:698,36,0	1/1:3,15:18:2.98:21,3,0	./.	0/0:25,0:25:41.85:0,42,1006	0/0:20,0:20:41.33:0,41,1663	0/0:22,0:22:20.50:0,21,540	1/1:7,14:21:9.03:565,9,0	1/1:10,22:32:66.18:1574,66,0	1/1:7,13:19:6.02:405,6,0	1/1:2,1:3:6.02:201,6,0
chr10	62845369	.	AATAG	A	2123.12	PASS	AB=1.000;AC=27;AF=0.587;AN=46;BaseQRankSum=-3.658;DP=568;FS=2.617;HRun=0;HaplotypeScore=150.3402;InbreedingCoeff=0.2934;MQ=56.19;MQ0=9;MQRankSum=1.429;QD=5.51;ReadPosRankSum=-1.447;VQSLOD=2.3684;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:43,4:46:43.17:766,43,0	1/1:4,10:14:8.93:122,9,0	./.	./.	1/1:14,18:32:29.70:252,30,0	0/0:13,0:12:2.22:0,2,7	1/1:13,0:13:1.25:3,1,0	1/1:36,0:32:8.90:61,9,0	0/1:33,0:33:6.19:6,0,743	0/1:24,0:24:11.99:38,0,12	./.	0/1:16,0:16:4.79:48,0,5	1/1:21,0:20:8.94:83,9,0	0/0:13,0:12:7.98:0,8,42	1/1:22,0:21:3:27,3,0	0/0:21,0:20:1.25:0,1,3	1/1:13,21:34:9.50:144,10,0	1/1:19,10:29:25.53:632,26,0	1/1:15,0:13:2.99:23,3,0	./.	./.	0/0:22,0:21:3.01:0,3,52	0/0:23,0:23:15.50:0,15,229	0/0:19,0:19:2.99:0,3,24	0/1:14,0:14:11.14:30,0,11	0/1:22,0:22:6.97:7,0,44	1/1:13,0:11:3.46:25,3,0	0/0:4,0:4:2.92:0,3,17
chr10	62845403	.	T	TAGATAGAC	896.15	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=2.544;DP=771;FS=0.535;HRun=0;HaplotypeScore=255.2619;InbreedingCoeff=0.3115;MQ=50.00;MQ0=14;MQRankSum=-1.608;QD=6.14;ReadPosRankSum=3.424;VQSLOD=2.0883;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:43:79.39:0,79,875	0/0:14,0:14:20.84:0,21,262	0/0:19,0:7:20.96:0,21,177	0/0:16,0:6:11.78:0,12,101	0/0:31,0:31:66.99:0,67,543	0/0:32,0:31:29.46:0,29,309	0/0:26,0:26:38.91:0,39,291	0/0:26,0:23:63.63:0,64,519	0/1:29,0:29:99:174,0,713	0/0:25,0:25:46.12:0,46,526	0/0:27,0:27:29.53:0,30,248	0/1:21,0:21:26.01:26,0,205	0/0:30,0:29:26.97:0,27,295	0/1:30,0:28:28.79:29,0,201	0/0:34,0:33:29.64:0,30,258	0/0:36,0:35:20.83:0,21,264	0/0:38,0:38:46.11:0,46,493	0/0:23,0:23:62.65:0,63,918	0/0:24,0:19:11.36:0,11,197	0/0:28,0:28:29.52:0,30,210	0/0:31,0:30:2.86:0,3,23	1/1:4,24:32:2.95:104,3,0	1/1:33,0:33:17.12:693,17,0	0/0:7,19:26:2.98:0,3,23	0/0:28,0:28:18.56:0,19,217	0/0:31,0:31:26.39:0,26,328	0/0:22,0:20:1.12:0,1,179	0/0:13,0:12:9.31:0,9,137
chr10	62845486	.	ATAGGTAGATAGG	A	15132.27	PASS	AB=0.674;AC=29;AF=0.518;AN=56;BaseQRankSum=9.630;DP=796;FS=7.302;HRun=0;HaplotypeScore=269.5058;InbreedingCoeff=0.7689;MQ=48.48;MQ0=12;MQRankSum=-9.961;QD=37.46;ReadPosRankSum=-1.598;VQSLOD=3.0833;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:60.16:0,60,2498	0/0:12,0:12:27.09:0,27,1210	0/0:44,0:9:24.04:0,24,648	0/0:38,0:9:20.83:0,21,532	0/0:21,0:21:57.20:0,57,2615	1/1:11,8:16:30.10:750,30,0	1/1:14,7:21:39.08:746,39,0	0/0:48,0:47:99:0,99,3221	0/0:39,0:39:99:0,99,4503	1/1:18,9:27:51.17:1448,51,0	1/1:15,14:29:18.61:351,19,0	1/1:21,19:40:99:2469,99,0	1/1:16,9:25:31.65:725,32,0	1/1:8,9:17:36:945,36,0	1/1:14,13:27:26.60:681,27,0	1/1:19,14:33:69.23:1594,69,0	0/0:24,0:24:57.18:0,57,2888	0/0:31,0:31:81.28:0,81,3697	0/1:8,1:6:36.59:141,0,37	0/1:7,22:28:99:161,0,186	1/1:23,1:20:5.98:166,6,0	0/0:42,0:41:90.27:0,90,3785	0/0:29,0:28:54.19:0,54,2276	0/0:31,0:31:60.13:0,60,2983	0/1:6,25:30:99:341,0,139	1/1:13,12:25:63.22:1855,63,0	1/1:10,19:29:54.55:1489,55,0	1/1:7,12:19:48.16:1270,48,0
chr10	62845574	.	G	GTAGA	16947.18	PASS	AB=1.000;AC=41;AF=0.732;AN=56;BaseQRankSum=-11.208;DP=824;FS=5.688;HRun=0;HaplotypeScore=123.2360;InbreedingCoeff=0.9038;MQ=57.90;MQ0=14;MQRankSum=-0.330;QD=26.32;ReadPosRankSum=5.088;VQSLOD=4.3387;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:31:69.14:0,69,1065	0/0:12,0:12:33.06:0,33,481	0/0:28,0:10:26.92:0,27,304	0/1:27,0:10:3.25:3,0,112	0/0:22,0:22:60.11:0,60,898	1/1:5,21:25:12.04:304,12,0	1/1:4,17:24:12.04:305,12,0	0/0:45,0:44:99:0,102,1324	1/1:5,38:44:45.15:1141,45,0	1/1:4,38:43:99:2252,117,0	1/1:5,20:25:26.98:647,27,0	1/1:5,25:31:30.10:760,30,0	1/1:3,27:30:24.08:608,24,0	1/1:4,32:37:42.14:1062,42,0	1/1:8,28:37:21.07:532,21,0	1/1:9,37:48:44.96:1132,45,0	0/0:28,0:28:50.17:0,50,979	0/0:13,0:13:24.05:0,24,372	1/1:3,23:24:60.04:914,60,0	1/1:16,5:22:54:959,54,0	1/1:14,18:32:27.02:610,27,0	1/1:2,18:21:15.05:381,15,0	1/1:0,16:16:5.53:151,6,0	1/1:6,15:20:18.06:457,18,0	1/1:21,8:29:45.13:968,45,0	1/1:4,29:36:87.14:1918,87,0	1/1:5,31:38:50.84:1234,51,0	1/1:6,23:29:24.08:609,24,0
chr10	62848145	.	TTTTTTG	T	411.42	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.882;DP=662;FS=2.802;HRun=0;HaplotypeScore=134.0828;InbreedingCoeff=0.8315;MQ=70.43;MQ0=4;MQRankSum=-4.137;QD=24.20;ReadPosRankSum=1.087;VQSLOD=3.0157;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:96.22:0,96,2679	0/0:11,0:11:27.09:0,27,847	0/0:23,0:19:6.03:0,6,291	0/0:20,0:13:7.47:0,7,165	0/0:24,0:24:57.19:0,57,1703	0/0:26,0:26:63.20:0,63,1926	0/0:24,0:24:72.16:0,72,2047	0/0:41,0:40:78.24:0,78,2187	1/1:3,14:15:23.91:505,24,0	0/0:32,0:32:81.26:0,81,2359	0/0:20,0:20:51.16:0,51,1543	0/0:35,0:35:75.23:0,75,2195	0/0:16,0:16:33.11:0,33,1016	0/0:32,0:32:75.21:0,75,2148	0/0:33,0:33:72.22:0,72,2085	0/0:28,0:28:63.20:0,63,1831	0/0:16,0:16:42.13:0,42,1287	0/0:25,0:24:51.13:0,51,1453	0/0:10,0:9:18.03:0,18,401	0/0:30,0:30:75.24:0,75,2186	0/0:23,0:23:42.14:0,42,1266	0/0:9,0:9:27.08:0,27,772	0/0:22,0:22:66.23:0,66,1931	0/0:24,0:24:60.19:0,60,1762	0/0:19,0:19:45.13:0,45,1382	0/0:25,0:25:63.19:0,63,1932	0/0:29,0:29:69.19:0,69,1917	0/0:8,0:8:21.06:0,21,680
chr10	62849770	.	C	CT	1944.55	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=8.855;DP=657;FS=11.818;HRun=3;HaplotypeScore=78.2580;InbreedingCoeff=0.9910;MQ=81.98;MQ0=0;MQRankSum=-0.681;QD=28.18;ReadPosRankSum=-0.151;VQSLOD=1.9411;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,135,1579	0/0:10,0:10:27.08:0,27,324	0/0:17,0:17:44.72:0,45,507	0/0:24,0:24:51.07:0,51,556	0/0:23,0:23:57.17:0,57,683	0/0:15,0:15:39.11:0,39,456	0/0:18,0:18:51.12:0,51,597	0/0:39,0:39:99:0,114,1359	1/1:0,18:18:51.16:634,51,0	0/0:26,0:26:78.15:0,78,917	0/0:19,0:19:51.15:0,51,603	0/0:23,0:23:69.21:0,69,827	0/0:27,0:27:75.19:0,75,874	0/0:21,0:21:60.16:0,60,699	0/0:45,0:45:99:0,132,1572	0/0:37,0:37:99:0,111,1309	0/0:35,0:35:99:0,99,1164	0/0:24,0:24:63.19:0,63,755	0/0:18,0:18:51.15:0,51,601	0/0:19,0:19:54.16:0,54,646	0/0:13,0:13:33.10:0,33,396	1/1:1,18:19:44.26:560,44,0	1/1:7,12:19:38.73:497,39,0	1/1:0,13:13:33.10:415,33,0	0/0:24,0:23:72.21:0,72,850	0/0:27,0:27:75.22:0,75,890	0/0:35,0:35:99:0,102,1222	0/0:4,0:4:12.04:0,12,144
chr10	62850028	.	AAACAAC	A	12474.97	PASS	AB=0.786;AC=42;AF=0.750;AN=56;BaseQRankSum=6.438;DP=718;FS=1.680;HRun=0;HaplotypeScore=161.6815;InbreedingCoeff=0.6943;MQ=51.51;MQ0=7;MQRankSum=-7.654;QD=22.60;ReadPosRankSum=1.495;VQSLOD=4.8529;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,0:34:33.11:454,33,0	0/0:12,0:12:21.07:0,21,656	0/1:37,0:17:16.01:16,0,69	0/0:26,0:13:3:0,3,26	1/1:15,0:37:47.76:578,48,0	1/1:9,10:19:24.08:486,24,0	1/1:13,13:26:24.08:479,24,0	0/0:31,0:29:33.07:0,33,646	1/1:22,0:22:44.70:511,45,0	1/1:15,19:34:54.08:953,54,0	1/1:4,17:21:48.12:930,48,0	0/0:15,0:41:20.26:0,20,248	1/1:6,20:26:39.13:796,39,0	1/1:5,19:24:36.12:729,36,0	1/1:9,16:25:30.10:607,30,0	1/1:8,22:30:54.02:1102,54,0	0/0:35,0:35:54.16:0,54,1611	0/0:21,0:21:42.14:0,42,1320	1/1:5,13:16:39.07:708,39,0	1/1:9,22:30:60.10:1076,60,0	1/1:10,19:29:6.02:115,6,0	1/1:16,0:16:19.60:253,20,0	1/1:17,0:17:0.96:12,1,0	1/1:19,0:18:10.09:124,10,0	0/1:6,18:24:10.62:754,0,11	1/1:5,18:24:56.81:1020,57,0	1/1:12,20:33:36.08:710,36,0	1/1:3,3:6:3.01:61,3,0
chr10	62850049	.	C	CA	525.45	PASS	AB=0.892;AC=4;AF=0.071;AN=56;BaseQRankSum=3.216;DP=704;FS=6.065;HRun=2;HaplotypeScore=146.4804;InbreedingCoeff=0.3739;MQ=49.45;MQ0=8;MQRankSum=-2.690;QD=10.10;ReadPosRankSum=0.649;VQSLOD=1.5236;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:37:68.88:0,69,597	0/0:14,0:14:39.12:0,39,483	0/0:32,0:13:36.11:0,36,442	0/0:29,0:8:14.96:0,15,166	0/0:35,0:35:89.42:0,89,805	0/0:16,0:16:40.57:0,41,327	0/0:20,0:20:40.68:0,41,306	0/0:38,0:35:93.29:0,93,1150	0/0:23,0:23:61.86:0,62,518	0/0:35,0:35:99:0,100,922	0/0:24,0:24:69.27:0,69,536	0/0:38,0:38:67.34:0,67,545	0/0:23,0:23:45.38:0,45,267	0/0:25,0:25:48.77:0,49,346	0/0:25,0:25:55.21:0,55,466	0/0:29,0:29:71.43:0,71,493	0/0:29,0:29:84.26:0,84,1037	0/0:18,0:18:50.98:0,51,609	0/0:20,0:18:49.07:0,49,376	0/0:34,0:33:93.05:0,93,787	0/0:28,0:28:23.88:0,24,255	0/1:15,1:16:99:112,0,157	0/1:13,3:16:99:272,0,143	1/1:17,3:19:7.07:247,7,0	0/0:23,0:23:51.42:0,51,354	0/0:25,0:25:72.18:0,72,538	0/0:26,0:26:45.49:0,45,295	0/0:5,0:5:8.55:0,9,62
chr10	62850051	.	AC	A	285.54	PASS	AB=0.720;AC=3;AF=0.054;AN=56;BaseQRankSum=9.198;DP=704;FS=4.807;HRun=1;HaplotypeScore=147.1479;InbreedingCoeff=-0.0543;MQ=49.53;MQ0=7;MQRankSum=-6.092;QD=5.71;ReadPosRankSum=4.993;VQSLOD=0.9449;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:37:38.96:0,39,590	0/0:14,0:14:42.14:0,42,634	0/0:33,0:15:45.06:0,45,565	0/0:26,0:6:14.91:0,15,186	0/0:34,0:34:47.52:0,48,714	0/0:16,0:16:23.18:0,23,266	0/0:21,0:21:27.80:0,28,244	0/0:38,0:35:99:0,102,1462	0/0:22,0:22:40.37:0,40,391	0/0:36,0:36:71.19:0,71,794	0/0:25,0:25:36.06:0,36,399	0/0:38,0:38:54.85:0,55,488	0/0:23,0:23:15.16:0,15,138	0/0:26,0:26:28.26:0,28,277	0/0:25,0:25:33.37:0,33,397	0/0:29,0:29:29.55:0,30,311	0/0:28,0:28:84.25:0,84,1244	0/0:18,0:18:50.94:0,51,788	0/0:20,0:18:28.94:0,29,307	0/0:35,0:34:60.22:0,60,691	0/0:30,0:30:27.42:0,27,313	0/1:8,8:16:99:117,0,222	0/1:10,4:14:99:134,0,168	0/1:12,8:19:18.98:135,0,19	0/0:23,0:23:21.18:0,21,228	0/0:26,0:26:40.87:0,41,393	0/0:25,0:25:20.87:0,21,203	0/0:5,0:5:6.49:0,6,74
chr10	62850054	.	AC	A	186.27	PASS	AB=0.738;AC=3;AF=0.054;AN=56;BaseQRankSum=9.299;DP=700;FS=4.798;HRun=1;HaplotypeScore=148.3319;InbreedingCoeff=-0.0596;MQ=50.66;MQ0=4;MQRankSum=-6.893;QD=3.58;ReadPosRankSum=5.016;VQSLOD=0.5489;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:36:36.01:0,36,574	0/0:14,0:14:42.14:0,42,634	0/0:30,0:16:43.94:0,44,579	0/0:25,0:6:15.03:0,15,194	0/0:33,0:33:45.40:0,45,727	0/0:16,0:16:23.18:0,23,266	0/0:23,0:23:11:0,11,277	0/0:40,0:37:99:0,108,1510	0/0:22,0:22:40.58:0,41,421	0/0:33,0:33:61.74:0,62,740	0/0:25,0:25:39.07:0,39,435	0/0:38,0:38:54.88:0,55,525	0/0:23,0:23:15.16:0,15,138	0/0:26,0:26:28.27:0,28,294	0/0:25,0:25:33.37:0,33,397	0/0:28,0:28:26.54:0,27,269	0/0:28,0:28:84.23:0,84,1224	0/0:17,0:17:51.17:0,51,797	0/0:21,0:20:34.83:0,35,361	0/0:35,0:34:59.29:0,59,709	0/0:30,0:30:27.45:0,27,344	0/1:10,8:18:65.20:65,0,261	0/1:11,4:15:99:104,0,191	0/1:12,7:18:21.77:117,0,22	0/0:24,0:24:24.15:0,24,230	0/0:26,0:26:40.86:0,41,395	0/0:24,0:24:16.99:0,17,177	0/0:5,0:5:6.49:0,6,84
chr10	62850058	.	CAACAACAACAAAA	C	1167.55	PASS	AB=0.971;AC=12;AF=0.214;AN=56;BaseQRankSum=4.961;DP=704;FS=1.023;HRun=0;HaplotypeScore=284.9463;InbreedingCoeff=-0.1953;MQ=52.00;MQ0=3;MQRankSum=-2.081;QD=4.01;ReadPosRankSum=-0.663;VQSLOD=2.0109;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:36:35.93:0,36,780	0/0:14,0:14:36.12:0,36,1537	0/0:26,0:15:28.71:0,29,674	0/0:26,0:8:15.05:0,15,308	0/0:33,0:34:34.60:0,35,850	0/0:15,0:15:15.82:0,16,757	0/1:24,0:24:44.50:45,0,709	0/0:41,0:38:87.28:0,87,1857	0/1:22,0:22:8.46:8,0,730	0/1:34,0:34:68.58:69,0,1433	0/1:24,0:24:63.50:64,0,947	0/0:38,0:39:72.20:0,72,2284	0/0:23,0:23:24.77:0,25,829	0/1:26,0:26:11.21:11,0,894	0/0:26,0:26:30.86:0,31,1116	0/0:27,0:26:20.58:0,21,1113	0/0:27,0:27:69.24:0,69,3511	0/0:18,0:18:51.13:0,51,2575	0/1:21,0:21:30.42:30,0,941	0/1:37,0:36:4.62:5,0,1427	0/0:30,0:30:33.11:0,33,721	0/1:12,6:18:46.08:601,0,46	0/1:14,0:14:19.52:82,0,20	0/1:17,2:18:2.01:295,0,2	0/0:23,0:23:50.95:0,51,883	0/1:27,0:27:86.37:86,0,1149	0/1:25,0:25:18.85:19,0,644	0/0:5,0:5:6.02:0,6,119
chr10	62850063	.	ACAAC	A	4666.87	PASS	AB=0.998;AC=24;AF=0.429;AN=56;BaseQRankSum=17.427;DP=697;FS=3.104;HRun=0;HaplotypeScore=162.6059;InbreedingCoeff=-0.4203;MQ=53.22;MQ0=3;MQRankSum=-10.720;QD=8.72;ReadPosRankSum=8.799;VQSLOD=2.9967;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:37,0:36:99:123,0,361	0/0:12,0:12:36.12:0,36,737	0/1:27,0:16:5.21:5,0,407	0/0:24,0:10:24.53:0,25,274	0/1:35,0:35:99:193,0,427	0/1:17,0:17:99:148,0,206	0/1:23,0:23:99:136,0,271	0/0:38,0:35:99:0,105,1561	1/1:12,10:22:51.48:594,51,0	0/1:31,0:31:99:279,0,386	0/1:24,0:24:99:315,0,213	0/0:41,0:41:31.29:0,31,486	0/1:24,0:24:92.30:271,0,92	0/1:27,0:27:99:232,0,226	0/1:24,0:24:99:188,0,233	0/1:26,0:25:77.70:379,0,78	0/0:25,0:25:75.22:0,75,1626	0/0:20,0:20:35.93:0,36,1309	0/1:22,0:22:99:233,0,250	0/1:34,0:33:99:401,0,301	0/1:31,0:31:5.85:6,0,321	1/1:18,0:18:17.23:247,17,0	0/1:12,0:12:11.65:13,0,12	0/1:18,0:17:18.39:65,0,18	0/1:22,0:22:99:270,0,116	0/1:28,0:28:99:323,0,277	0/1:25,0:25:94.83:237,0,95	0/1:7,0:7:9.70:10,0,128
chr10	62850071	.	A	AAAC	1809.50	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=2.975;DP=737;FS=0.000;HRun=0;HaplotypeScore=174.2350;InbreedingCoeff=0.9952;MQ=55.45;MQ0=1;MQRankSum=-0.136;QD=24.13;ReadPosRankSum=0.532;VQSLOD=3.5940;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:38:69.05:0,69,937	0/0:14,0:14:35.76:0,36,484	0/0:29,0:19:19.56:0,20,504	0/0:26,0:14:26.38:0,26,353	0/0:39,0:39:89.95:0,90,1211	0/0:19,0:19:51.08:0,51,697	0/0:23,0:23:50.74:0,51,626	0/0:37,0:37:90.26:0,90,1226	1/1:12,0:22:56.99:722,57,0	0/0:33,0:33:78.10:0,78,1066	0/0:24,0:24:63.06:0,63,815	0/0:35,0:35:81.27:0,81,1199	0/0:29,0:29:63.10:0,63,857	0/0:30,0:30:63.10:0,63,850	0/0:24,0:24:57.10:0,57,793	0/0:33,0:32:87.04:0,87,1157	0/0:28,0:28:84.26:0,84,1211	0/0:20,0:21:57.10:0,57,776	0/0:23,0:23:62.15:0,62,807	0/0:36,0:35:81.25:0,81,1131	0/0:32,0:32:42.08:0,42,539	1/1:20,0:20:51.55:592,52,0	1/1:13,0:13:33.09:498,33,0	1/1:7,13:19:17.63:157,18,0	0/0:23,0:23:57.17:0,57,775	0/0:30,0:30:72.60:0,73,1006	0/0:23,0:23:47.91:0,48,608	0/0:12,0:12:27.07:0,27,359
chr10	62850701	.	TA	T	399.41	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.665;DP=716;FS=0.863;HRun=9;HaplotypeScore=70.5957;InbreedingCoeff=0.8477;MQ=63.43;MQ0=1;MQRankSum=0.269;QD=15.36;ReadPosRankSum=1.081;VQSLOD=3.8931;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:90.18:0,90,1018	0/0:3,0:3:3.01:0,3,35	0/0:13,0:13:26.98:0,27,266	0/0:14,0:12:26.11:0,26,296	0/0:36,0:36:87.24:0,87,991	0/0:28,0:28:81.17:0,81,906	0/0:20,0:20:48.11:0,48,533	0/0:41,0:41:99:0,102,1149	1/1:4,22:26:54.02:494,54,0	0/0:31,0:31:81.22:0,81,913	0/0:28,0:28:84.25:0,84,965	0/0:25,0:25:73.46:0,73,833	0/0:26,0:26:72.20:0,72,817	0/0:26,0:26:69.20:0,69,796	0/0:39,0:39:99:0,105,1211	0/0:42,0:42:99:0,120,1385	0/0:24,0:24:66.20:0,66,762	0/0:22,0:22:54.12:0,54,608	0/0:15,0:15:42.12:0,42,485	0/0:18,0:18:45.13:0,45,519	0/0:24,0:24:66.20:0,66,762	0/0:35,0:35:99:0,105,1203	0/0:23,0:23:60.17:0,60,684	0/0:21,0:21:54.16:0,54,623	0/0:29,0:29:78.21:0,78,884	0/0:36,0:36:99:0,99,1126	0/0:30,0:30:84.25:0,84,966	0/0:9,0:9:24.07:0,24,277
chr10	62851506	.	CAGT	C	1592.45	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.358;DP=705;FS=14.059;HRun=0;HaplotypeScore=97.5332;InbreedingCoeff=0.9912;MQ=89.53;MQ0=0;MQRankSum=-3.905;QD=33.88;ReadPosRankSum=2.196;VQSLOD=3.2354;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,126,2905	0/0:5,0:5:15.02:0,15,296	0/0:33,0:34:92.49:0,92,1890	0/0:22,0:22:51.18:0,51,1154	0/0:25,0:25:66.21:0,66,1473	0/0:24,0:24:72.22:0,72,1526	0/0:26,0:26:78.27:0,78,1799	0/0:34,0:34:90.31:0,90,2043	0/0:18,0:18:54.19:0,54,1245	0/0:20,0:20:57.20:0,57,1300	0/0:18,0:18:48.09:0,48,953	0/0:40,0:40:99:0,120,2671	0/0:23,0:23:66.23:0,66,1516	0/0:43,0:43:99:0,120,2735	0/0:39,0:39:99:0,117,2656	0/0:48,0:48:99:0,141,3144	0/0:15,0:15:45.15:0,45,1037	0/0:13,0:13:39.05:0,39,791	0/0:16,0:16:45.15:0,45,983	0/0:24,0:24:72.25:0,72,1621	0/0:30,0:30:90.31:0,90,2055	1/1:2,16:18:48.07:743,48,0	1/1:2,16:18:42.09:684,42,0	1/1:0,11:11:17.87:307,18,0	0/0:11,0:11:33.11:0,33,742	0/0:27,0:27:81.27:0,81,1824	0/0:32,0:32:96.31:0,96,2120	0/0:27,0:27:81.28:0,81,1868
chr10	62851654	.	A	ACACG	1757.89	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-7.415;DP=656;FS=5.337;HRun=0;HaplotypeScore=107.1257;InbreedingCoeff=0.9904;MQ=67.43;MQ0=0;MQRankSum=-0.033;QD=35.88;ReadPosRankSum=0.988;VQSLOD=3.7789;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:48.14:0,48,735	0/0:11,0:11:27.04:0,27,415	0/0:28,0:27:26.82:0,27,299	0/0:29,0:25:27.09:0,27,436	0/0:17,0:17:39.12:0,39,618	0/0:23,0:23:48.10:0,48,721	0/0:31,0:31:63.11:0,63,943	0/0:27,0:27:38.87:0,39,397	0/0:18,0:18:42.04:0,42,633	0/0:19,0:19:42.12:0,42,607	0/0:16,0:16:33.10:0,33,520	0/0:39,0:39:81.26:0,81,1302	0/0:19,0:19:39.09:0,39,588	0/0:28,0:28:57.18:0,57,910	0/0:24,0:24:57.08:0,57,854	0/0:25,0:25:54.16:0,54,836	0/0:30,0:30:60.12:0,60,909	0/0:29,0:29:78.17:0,78,1205	0/0:17,0:17:24.06:0,24,328	0/0:20,0:20:33.11:0,33,538	0/0:48,0:48:84.27:0,84,1354	1/1:3,9:14:21.07:509,21,0	1/1:5,4:9:15.05:360,15,0	1/1:8,16:26:42.14:1029,42,0	0/0:17,0:17:33.10:0,33,517	0/0:27,0:27:59.96:0,60,860	0/0:25,0:25:45.09:0,45,642	0/0:12,0:12:30.10:0,30,495
chr10	62853118	.	T	TG	4450.52	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-11.598;DP=502;FS=5.272;HRun=1;HaplotypeScore=47.7447;InbreedingCoeff=0.9807;MQ=84.21;MQ0=0;MQRankSum=-2.600;QD=42.79;ReadPosRankSum=1.506;VQSLOD=4.9413;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,102,1304	1/1:1,4:5:12.04:180,12,0	0/0:13,0:13:36.12:0,36,463	0/0:18,0:18:48.15:0,48,613	0/0:7,0:7:21.07:0,21,273	0/0:15,0:15:45.15:0,45,584	0/0:21,0:21:63.20:0,63,815	1/1:0,18:18:54.18:809,54,0	0/0:12,0:12:36.12:0,36,467	0/0:15,0:15:45.15:0,45,584	0/0:5,0:5:15.04:0,15,181	0/0:19,0:19:57.19:0,57,740	0/0:15,0:15:45.11:0,45,566	0/0:20,0:20:57.19:0,57,740	0/0:15,0:15:45.13:0,45,570	0/0:15,0:15:45.13:0,45,568	1/1:1,30:31:87.29:1303,87,0	1/1:0,50:50:99:2158,144,0	0/0:22,0:22:63.20:0,63,818	0/0:7,0:7:18.06:0,18,234	0/0:33,0:33:93.29:0,93,1193	0/0:15,0:15:42.14:0,42,544	0/0:8,0:8:24.08:0,24,312	0/0:30,0:30:90.29:0,90,1169	0/0:7,0:7:18.06:0,18,234	0/0:18,0:18:54.18:0,54,700	0/0:13,0:12:36.12:0,36,467	0/0:16,0:16:45.15:0,45,582
chr10	62855271	.	CTATT	C	635.24	PASS	AB=0.920;AC=10;AF=0.250;AN=40;BaseQRankSum=6.039;DP=323;FS=2.208;HRun=0;HaplotypeScore=51.1198;InbreedingCoeff=0.4453;MQ=69.28;MQ0=2;MQRankSum=-1.936;QD=7.47;ReadPosRankSum=-0.786;VQSLOD=1.7700;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:9,12:22:36.12:537,36,0	./.	./.	./.	1/1:7,2:9:6.02:93,6,0	0/0:11,0:11:9.03:0,9,211	./.	0/0:38,0:35:9.02:0,9,144	1/1:9,0:11:3:28,3,0	0/1:6,1:7:37.28:37,0,132	0/0:11,0:11:2.99:0,3,24	0/0:12,0:12:18.06:0,18,422	0/0:11,0:11:6.02:0,6,141	./.	0/0:8,0:11:6.02:0,6,105	./.	0/1:27,1:28:19.21:19,0,536	0/0:23,0:23:30.10:0,30,693	0/0:17,0:16:12.04:0,12,281	0/0:7,0:7:6.02:0,6,141	0/0:8,0:8:3.01:0,3,70	./.	1/1:6,0:8:6:53,6,0	./.	0/0:11,0:11:15.05:0,15,352	0/0:10,0:10:12.04:0,12,271	0/0:18,0:18:24.08:0,24,563	0/0:12,0:12:15.05:0,15,321
chr10	62856033	.	TA	T	956.55	PASS	AB=0.842;AC=11;AF=0.196;AN=56;BaseQRankSum=3.366;DP=538;FS=4.217;HRun=14;HaplotypeScore=71.2795;InbreedingCoeff=0.5283;MQ=73.58;MQ0=1;MQRankSum=-0.946;QD=7.84;ReadPosRankSum=1.357;VQSLOD=2.9519;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:1,0:24:31.16:0,31,153	1/1:3,7:11:0.96:140,1,0	0/0:36,0:21:20.80:0,21,159	0/0:23,0:14:12.82:0,13,146	0/0:4,0:26:51.76:0,52,274	0/0:16,1:18:15.27:0,15,264	0/0:18,1:20:24.29:0,24,352	1/1:6,23:31:68.79:462,69,0	0/0:6,1:9:0.12:0,0,120	0/0:13,0:13:27.02:0,27,248	0/0:19,2:21:15.90:0,16,432	0/0:20,1:21:15.42:0,15,275	0/0:15,1:16:21.20:0,21,312	0/0:12,0:12:26.79:0,27,226	0/0:20,0:20:24.57:0,25,370	0/0:22,1:23:30.44:0,30,413	1/1:8,16:24:27.69:325,28,0	1/1:4,4:9:16.90:108,17,0	0/0:16,0:18:38.24:0,38,292	0/0:15,1:16:9.43:0,9,223	0/0:10,0:10:24.02:0,24,219	0/1:13,2:15:11.15:11,0,188	0/1:12,3:15:25.44:25,0,211	0/0:13,1:14:9.38:0,9,216	0/1:13,4:17:43.45:43,0,198	0/0:21,1:22:21.47:0,21,339	0/0:31,3:35:42.70:0,43,652	0/0:17,0:18:36.02:0,36,326
chr10	62856106	.	G	GT	2229.90	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=5.628;DP=592;FS=5.842;HRun=8;HaplotypeScore=72.5560;InbreedingCoeff=0.9098;MQ=71.17;MQ0=0;MQRankSum=-1.096;QD=22.08;ReadPosRankSum=-2.676;VQSLOD=3.0685;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:54.08:0,54,507	1/1:3,11:14:38.95:429,39,0	0/1:19,0:15:1.44:1,0,194	0/0:16,0:11:11.28:0,11,92	0/0:25,0:25:59.50:0,60,528	0/0:20,0:20:54.01:0,54,489	0/0:26,0:26:66.03:0,66,604	1/1:15,20:35:84.15:927,84,0	0/0:11,0:11:24:0,24,220	0/0:26,0:25:69.03:0,69,631	0/0:25,0:25:68.97:0,69,617	0/0:14,0:14:32.99:0,33,297	0/0:25,0:25:72.03:0,72,655	0/0:16,0:16:48.03:0,48,439	0/0:30,0:30:87.03:0,87,792	0/0:14,0:14:36.01:0,36,329	1/1:0,18:19:47.19:583,47,0	1/1:1,13:14:39.12:450,39,0	0/0:21,0:21:54.02:0,54,493	0/0:10,0:10:30.02:0,30,275	0/0:14,0:14:30:0,30,275	0/0:20,1:21:37.37:0,37,518	0/0:28,0:28:73.25:0,73,652	0/0:27,0:27:75.01:0,75,680	0/0:19,0:19:51:0,51,458	0/0:24,0:24:63.01:0,63,571	0/0:32,0:32:78.02:0,78,713	0/0:22,0:22:28.91:0,29,515
chr10	62856273	.	TC	T	14448.68	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=14.674;DP=689;FS=3.681;HRun=2;HaplotypeScore=67.5074;InbreedingCoeff=0.9771;MQ=87.75;MQ0=0;MQRankSum=-3.770;QD=36.03;ReadPosRankSum=4.873;VQSLOD=5.3679;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,117,1732	0/0:2,0:2:6.02:0,6,90	0/0:32,0:32:95.11:0,95,1313	0/0:28,0:27:68.49:0,68,965	0/0:17,0:17:48.16:0,48,718	1/1:0,16:16:42.14:545,42,0	1/1:0,27:27:81.26:1052,81,0	0/0:42,0:42:99:0,123,1803	0/0:16,0:16:45.15:0,45,673	1/1:0,18:18:54.18:699,54,0	1/1:0,22:22:60.15:760,60,0	1/1:0,34:34:96.31:1246,96,0	1/1:0,35:35:93.30:1207,93,0	1/1:1,24:25:72.23:935,72,0	1/1:0,53:53:99:1791,138,0	1/1:1,21:22:60.19:779,60,0	0/0:29,0:29:87.27:0,87,1256	0/0:26,0:26:78.26:0,78,1165	1/1:0,21:21:63.19:803,63,0	1/1:0,25:25:72.23:932,72,0	1/1:1,33:34:87.28:1129,87,0	0/0:16,0:16:48.16:0,48,719	0/0:13,0:13:39.13:0,39,583	0/0:28,0:28:84.27:0,84,1238	1/1:0,20:20:60.19:778,60,0	1/1:0,9:9:27.09:351,27,0	1/1:0,37:37:99:1324,102,0	1/1:0,3:3:9.03:117,9,0
chr10	62857107	.	G	GT	1449.32	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=4.773;DP=599;FS=1.189;HRun=9;HaplotypeScore=62.6116;InbreedingCoeff=0.9737;MQ=77.72;MQ0=0;MQRankSum=0.853;QD=23.76;ReadPosRankSum=1.900;VQSLOD=4.5835;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:51,3:54:98.69:0,99,1079	0/0:7,0:7:11.98:0,12,103	0/0:21,0:20:32.15:0,32,261	0/0:20,0:20:33.68:0,34,270	0/0:17,0:17:32.96:0,33,286	0/0:16,0:16:35.98:0,36,313	0/0:24,0:24:65.96:0,66,567	0/0:27,1:29:31.57:0,32,493	0/0:9,0:9:23.99:0,24,208	0/0:23,0:23:53.96:0,54,469	0/0:16,0:16:44.99:0,45,391	0/0:18,0:18:44.96:0,45,386	0/0:24,0:24:62.98:0,63,547	0/0:24,0:24:59.95:0,60,515	0/0:21,0:21:53.96:0,54,464	0/0:24,0:24:68.98:0,69,599	0/0:32,0:32:83.97:0,84,729	0/0:28,1:29:47.79:0,48,640	0/0:26,0:26:50.96:0,51,438	0/0:17,0:17:44.98:0,45,391	0/0:25,0:25:59.97:0,60,521	1/1:6,11:17:30.08:331,30,0	1/1:2,14:16:39.11:431,39,0	1/1:2,26:28:75.20:830,75,0	0/0:17,0:17:12.31:0,12,332	0/0:22,0:22:33.43:0,33,468	0/0:17,0:17:41.98:0,42,364	0/0:5,0:6:16.81:0,17,136
chr10	62858063	.	C	CA	345.33	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=4.624;DP=352;FS=16.468;HRun=0;HaplotypeScore=69.5939;InbreedingCoeff=0.7520;MQ=86.75;MQ0=0;MQRankSum=-4.724;QD=8.22;ReadPosRankSum=0.365;VQSLOD=2.2278;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:3,0:3:5.87:0,6,45	0/0:1,0:1:2.04:0,2,6	0/0:17,0:14:34.94:0,35,286	0/0:30,0:26:55.24:0,55,557	0/0:3,0:3:5.79:0,6,51	0/0:13,0:13:28:0,28,234	0/0:24,0:24:48.37:0,48,396	0/0:13,0:13:22.15:0,22,178	0/0:5,0:5:13.15:0,13,89	0/0:7,0:7:17.97:0,18,154	0/0:6,0:6:6.88:0,7,52	0/0:20,0:20:36.36:0,36,294	0/0:15,0:15:32.96:0,33,275	0/0:11,0:11:26.92:0,27,221	0/0:20,0:20:51.62:0,52,420	0/0:15,0:15:35.93:0,36,297	0/0:11,0:11:25.70:0,26,177	0/0:15,0:15:22.62:0,23,223	0/0:15,0:15:31:0,31,222	0/0:9,0:9:21.63:0,22,128	0/0:24,0:24:54.22:0,54,446	1/1:6,4:10:13.90:125,14,0	1/1:5,3:8:4.82:83,5,0	1/1:17,7:24:26.44:267,26,0	0/0:6,0:6:14.94:0,15,118	0/0:15,0:15:38.82:0,39,333	0/0:10,0:10:15.22:0,15,106	0/0:2,0:2:6:0,6,52
chr10	62858072	.	C	CT	127.09	PASS	AB=0.952;AC=4;AF=0.074;AN=54;BaseQRankSum=5.505;DP=368;FS=13.211;HRun=0;HaplotypeScore=71.5557;InbreedingCoeff=0.4167;MQ=85.50;MQ0=0;MQRankSum=-4.182;QD=3.10;ReadPosRankSum=1.236;VQSLOD=1.6356;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:5:12.87:0,13,103	0/0:1,0:1:2.04:0,2,6	0/0:18,0:15:18.69:0,19,208	0/0:29,0:25:50.51:0,51,376	./.	0/0:10,0:10:21.31:0,21,174	0/0:29,0:29:54.03:0,54,415	0/0:11,0:11:10.17:0,10,69	0/0:7,0:7:16.17:0,16,119	0/0:10,0:10:20.91:0,21,164	0/0:6,0:6:8.94:0,9,71	0/0:20,0:20:17.89:0,18,142	0/0:14,0:14:29.88:0,30,235	0/0:13,0:13:23.78:0,24,196	0/0:23,0:23:56.70:0,57,446	0/0:15,0:15:29.81:0,30,226	0/0:10,0:10:15.72:0,16,108	0/0:18,0:18:38.88:0,39,293	0/0:14,0:14:28.01:0,28,200	0/0:9,0:9:15.85:0,16,124	0/0:26,0:26:51.27:0,51,408	1/1:10,2:12:12.96:78,13,0	0/1:10,0:10:6.19:43,0,6	0/1:17,2:19:43.25:116,0,43	0/0:6,0:6:14.78:0,15,107	0/0:17,0:17:32.86:0,33,277	0/0:13,0:13:23.90:0,24,188	0/0:2,0:2:5.99:0,6,50
chr10	62858073	.	C	CCCCCG	1059.59	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=4.893;DP=363;FS=25.038;HRun=0;HaplotypeScore=113.3788;InbreedingCoeff=0.4147;MQ=85.46;MQ0=0;MQRankSum=-2.742;QD=9.06;ReadPosRankSum=-0.983;VQSLOD=0.9587;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:5,0:5:12.25:75,12,0	1/1:1,0:1:3:25,3,0	0/0:18,0:15:13.44:0,13,163	0/0:28,0:24:29.16:0,29,316	0/1:2,0:2:0.01:0,0,0	0/0:10,0:10:11.42:0,11,153	0/0:28,0:28:36.75:0,37,367	0/1:10,0:10:14.81:15,0,47	0/1:7,0:7:17.39:17,0,19	0/0:10,0:10:14.89:0,15,133	0/0:6,0:6:1.51:0,2,4	0/0:19,0:19:11.88:0,12,108	0/0:13,0:13:11.89:0,12,141	0/0:14,0:14:8.87:0,9,90	0/0:23,0:23:25.51:0,26,279	0/0:16,0:16:17.95:0,18,216	1/1:10,0:10:0.32:175,0,0	0/1:18,0:18:99:104,0,127	0/1:13,0:13:50.34:50,0,133	0/1:9,0:9:12.59:13,0,20	0/0:25,0:25:22.98:0,23,199	1/1:2,3:12:11.99:191,12,0	1/1:7,3:10:11.82:91,12,0	1/1:9,7:18:27.08:472,27,0	0/0:6,0:6:12.01:0,12,141	0/0:17,0:17:17.64:0,18,160	0/0:13,0:13:17.97:0,18,179	0/1:2,0:2:0:0,0,0
chr10	62860415	.	CT	C	1407.09	PASS	AB=0.659;AC=13;AF=0.232;AN=56;BaseQRankSum=5.082;DP=639;FS=8.120;HRun=15;HaplotypeScore=78.8166;InbreedingCoeff=0.1941;MQ=66.24;MQ0=1;MQRankSum=0.081;QD=6.31;ReadPosRankSum=3.704;VQSLOD=2.5153;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:13,18:33:41.97:175,0,42	1/1:2,7:10:1.72:96,2,0	0/0:20,0:12:20.04:0,20,120	0/0:12,0:9:11.32:0,11,59	0/1:8,12:20:36.24:133,0,36	0/0:17,2:21:28.25:0,28,329	0/0:20,0:20:17.53:0,18,260	0/1:13,12:25:34.74:182,0,35	0/0:22,2:23:26.73:0,27,319	0/0:22,0:22:41.96:0,42,359	0/1:14,2:18:11.68:12,0,165	0/0:19,3:23:0.46:0,0,252	0/0:19,1:20:5.48:0,5,141	0/0:11,0:14:20.94:0,21,172	0/0:27,2:30:18.26:0,18,384	0/0:28,1:30:49.31:0,49,510	0/1:11,17:30:18.65:223,0,19	1/1:2,16:20:39.49:242,39,0	0/0:24,1:25:19.55:0,20,282	0/0:17,1:18:17:0,17,248	0/0:19,0:23:23.88:0,24,219	1/1:5,10:15:22.13:139,22,0	0/1:8,13:23:42.73:129,0,43	0/1:11,17:29:23.84:239,0,24	0/0:18,0:20:47.61:0,48,383	0/0:27,0:32:50.94:0,51,396	0/0:27,2:31:11.76:0,12,284	0/0:25,1:29:38.93:0,39,439
chr10	62860760	.	AC	A	3781.71	PASS	AB=0.706;AC=46;AF=0.821;AN=56;BaseQRankSum=-2.497;DP=556;FS=0.709;HRun=11;HaplotypeScore=77.4783;InbreedingCoeff=0.4881;MQ=79.80;MQ0=13;MQRankSum=0.093;QD=8.98;ReadPosRankSum=2.523;VQSLOD=2.7295;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:29,3:32:33.88:213,34,0	1/1:6,0:6:9.04:33,9,0	0/0:57,0:22:15.42:0,15,141	0/0:67,0:29:16.67:0,17,135	0/1:10,0:10:3.98:5,0,4	0/1:4,7:11:3.97:18,0,4	0/1:5,10:16:13.43:36,0,13	1/1:25,0:21:28.98:109,29,0	0/0:11,0:11:9.03:0,9,142	1/1:5,4:9:17.84:127,18,0	1/1:6,4:10:11.89:90,12,0	1/1:26,1:27:37.38:363,37,0	1/1:11,2:13:24.52:148,25,0	1/1:25,1:27:31.47:309,31,0	1/1:15,1:16:32.65:239,33,0	1/1:12,2:14:29.83:222,30,0	1/1:28,0:28:34.31:121,34,0	1/1:23,0:24:3.72:47,4,0	1/1:3,9:11:26.84:204,27,0	1/1:7,9:16:23.48:141,23,0	1/1:19,1:20:36.11:298,36,0	0/1:5,8:13:2.27:51,0,2	1/1:11,0:11:16.36:111,16,0	1/1:25,3:27:55.38:404,55,0	1/1:9,1:10:1.23:132,1,0	1/1:5,7:12:14.81:101,15,0	1/1:15,0:15:2.86:98,3,0	1/1:9,6:15:20.87:159,21,0
chr10	62860769	.	CCCA	C	1674.49	PASS	AB=1.000;AC=10;AF=0.179;AN=56;BaseQRankSum=-1.540;DP=608;FS=14.705;HRun=0;HaplotypeScore=100.8099;InbreedingCoeff=0.7196;MQ=68.51;MQ0=16;MQRankSum=-1.659;QD=11.24;ReadPosRankSum=5.036;VQSLOD=1.7877;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:32,0:33:99:131,0,153	1/1:3,5:8:15.03:206,15,0	0/0:70,0:18:32.45:0,32,352	0/0:62,0:20:24.50:0,24,312	0/0:16,0:16:25.97:0,26,152	0/0:14,0:14:8.41:0,8,171	0/0:18,0:18:13.55:0,14,187	1/1:6,18:20:28.29:534,28,0	0/0:14,0:14:41.73:0,42,531	0/0:10,0:10:19.48:0,19,104	0/0:14,0:14:31.54:0,32,257	0/0:27,0:27:71.07:0,71,611	0/0:13,0:13:17.12:0,17,204	0/0:26,0:26:45.64:0,46,543	0/0:17,0:17:14.84:0,15,269	0/0:12,0:12:29.33:0,29,236	1/1:8,28:37:41.58:655,42,0	1/1:6,23:28:26.19:306,26,0	0/0:14,0:13:31.28:0,31,265	0/1:18,0:18:7.17:7,0,184	0/0:22,0:22:40.05:0,40,409	0/0:15,0:15:22.49:0,22,163	0/0:11,0:11:23.52:0,24,201	0/0:25,0:24:61.72:0,62,527	0/0:14,0:14:5.95:0,6,274	0/0:15,0:15:25.03:0,25,214	0/0:15,0:15:24.68:0,25,286	0/0:15,0:15:16.43:0,16,160
chr10	62861837	.	TG	T	3397.50	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=10.159;DP=628;FS=10.543;HRun=3;HaplotypeScore=61.9116;InbreedingCoeff=0.9973;MQ=86.22;MQ0=0;MQRankSum=-1.471;QD=33.31;ReadPosRankSum=0.543;VQSLOD=3.3844;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,129,1855	1/1:0,7:7:18.06:223,18,0	0/0:20,0:20:50.86:0,51,711	0/0:24,0:24:65.95:0,66,825	0/0:15,0:15:39.13:0,39,561	0/0:25,0:25:72.21:0,72,984	0/0:20,0:20:57.18:0,57,803	1/1:0,28:28:84.24:1018,84,0	0/0:24,0:24:69.23:0,69,990	0/0:17,0:17:51.15:0,51,693	0/0:12,0:12:33.09:0,33,439	0/0:37,0:37:99:0,108,1494	0/0:21,0:21:60.18:0,60,844	0/0:31,0:31:87.27:0,87,1218	0/0:21,0:21:60.20:0,60,862	0/0:24,0:24:69.23:0,69,991	1/1:2,34:36:96.30:1190,96,0	1/1:1,30:31:78.24:967,78,0	0/0:21,0:21:57.64:0,58,784	0/0:15,0:15:42.13:0,42,582	0/0:22,0:22:66.21:0,66,930	0/0:19,0:19:47.80:0,48,626	0/0:16,0:16:48.16:0,48,689	0/0:30,0:30:87.26:0,87,1213	0/0:17,0:17:51.15:0,51,711	0/0:28,0:28:81.27:0,81,1165	0/0:12,0:12:36.12:0,36,517	0/0:9,0:9:27.09:0,27,389
chr10	62864056	.	GC	G	3682.26	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=8.138;DP=571;FS=9.650;HRun=2;HaplotypeScore=59.6867;InbreedingCoeff=0.9840;MQ=86.23;MQ0=0;MQRankSum=-1.303;QD=36.82;ReadPosRankSum=0.515;VQSLOD=3.7391;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:37:99:0,105,1550	1/1:0,4:4:12.04:156,12,0	0/0:21,0:21:51.99:0,52,738	0/0:19,0:19:50.95:0,51,671	0/0:13,0:13:36.12:0,36,539	0/0:19,0:19:57.18:0,57,831	0/0:29,0:29:87.29:0,87,1302	1/1:1,27:28:78.24:999,78,0	0/0:15,0:15:45.14:0,45,651	0/0:14,0:14:39.13:0,39,577	0/0:9,0:9:27.09:0,27,404	0/0:32,0:32:87.29:0,87,1302	0/0:20,0:20:60.20:0,60,897	0/0:26,0:26:78.22:0,78,1116	0/0:16,0:16:48.16:0,48,715	0/0:24,0:24:72.24:0,72,1077	1/1:0,42:42:99:1596,123,0	1/1:0,26:26:72.23:932,72,0	0/0:18,0:18:51.17:0,51,759	0/0:10,0:10:30.10:0,30,444	0/0:44,0:44:99:0,132,1917	0/0:10,0:10:30.10:0,30,450	0/0:12,0:12:33.03:0,33,465	0/0:33,0:33:93.30:0,93,1373	0/0:5,0:5:15.03:0,15,203	0/0:16,0:16:48.15:0,48,683	0/0:22,0:22:66.19:0,66,960	0/0:6,0:6:18.06:0,18,270
chr10	62864155	.	CA	C	1008.50	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=4.226;DP=376;FS=5.604;HRun=1;HaplotypeScore=51.0041;InbreedingCoeff=0.9471;MQ=71.11;MQ0=1;MQRankSum=-3.706;QD=30.56;ReadPosRankSum=-2.142;VQSLOD=2.5238;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,14:23:53.83:748,54,0	0/0:6,0:6:18.06:0,18,283	0/0:9,0:9:27.09:0,27,416	0/0:7,0:6:15.01:0,15,225	1/1:4,6:10:30.07:382,30,0	0/0:13,0:13:39.13:0,39,623	0/0:6,0:6:18.02:0,18,259	0/0:27,0:27:72.24:0,72,1128	0/0:6,0:6:18.05:0,18,262	0/0:25,0:25:69.20:0,69,1031	0/0:11,0:11:30.56:0,31,448	0/0:17,0:17:45.15:0,45,711	0/0:17,0:17:48.16:0,48,762	0/0:16,0:16:48.14:0,48,712	0/0:13,0:12:39.13:0,39,619	0/0:9,0:9:27.09:0,27,431	0/0:23,0:23:60.20:0,60,956	0/0:18,0:17:48.16:0,48,767	0/0:13,0:13:36.10:0,36,541	0/0:9,0:9:27.09:0,27,430	0/0:11,0:11:33.11:0,33,527	0/0:5,0:5:12.04:0,12,189	0/0:5,0:5:15.05:0,15,240	0/0:7,0:7:18.06:0,18,288	0/0:22,0:22:63.21:0,63,997	0/0:27,0:27:78.22:0,78,1198	0/0:14,0:14:42.08:0,42,618	0/0:7,0:7:18.04:0,18,264
chr10	62864160	.	G	GTT	2289.34	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=0.425;DP=366;FS=1.814;HRun=12;HaplotypeScore=61.5073;InbreedingCoeff=0.8707;MQ=66.06;MQ0=2;MQRankSum=-4.268;QD=16.96;ReadPosRankSum=-1.380;VQSLOD=2.2657;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:28:32.05:149,32,0	1/1:2,4:8:20.55:244,21,0	0/0:7,0:7:7.82:0,8,81	0/0:6,0:5:6:0,6,56	1/1:6,0:11:19.71:96,20,0	0/0:12,0:12:26.28:0,26,218	0/0:7,0:7:14.95:0,15,139	1/1:8,15:25:61.90:750,62,0	0/0:4,0:4:5.99:0,6,56	0/0:27,0:27:59.41:0,59,532	0/0:10,0:10:26.59:0,27,249	0/0:14,0:14:29.96:0,30,272	0/0:16,0:16:32.95:0,33,305	0/0:13,0:13:36:0,36,327	0/0:10,0:11:11.86:0,12,158	0/0:8,0:8:17.67:0,18,150	1/1:7,18:26:48.16:673,48,0	1/1:8,12:19:42.05:532,42,0	0/0:15,0:14:29.97:0,30,277	0/0:9,0:9:23.98:0,24,222	0/0:7,0:7:12:0,12,111	1/1:0,0:3:4.99:17,5,0	1/1:4,0:6:4.99:17,5,0	1/1:4,0:6:2.50:9,2,0	0/0:19,0:19:44.98:0,45,416	0/0:24,0:24:57.03:0,57,523	0/0:13,0:13:36.03:0,36,333	0/0:7,0:7:18:0,18,167
chr10	62864633	.	C	CTT	135.90	PASS	AB=0.667;AC=1;AF=0.018;AN=56;BaseQRankSum=-1.774;DP=458;FS=4.225;HRun=7;HaplotypeScore=56.8724;InbreedingCoeff=-0.0309;MQ=61.04;MQ0=20;MQRankSum=-2.633;QD=8.49;ReadPosRankSum=-1.169;VQSLOD=-0.6175;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:25:54.14:0,54,619	0/0:9,0:9:18.03:0,18,207	0/0:10,0:4:3:0,3,34	0/0:12,0:8:6.86:0,7,46	0/0:21,0:20:45.10:0,45,509	0/0:15,0:13:30.09:0,30,348	0/0:23,0:23:54.13:0,54,619	0/0:31,0:30:63.10:0,63,709	0/0:9,0:9:21.05:0,21,245	0/0:12,0:11:15.02:0,15,175	0/0:18,0:17:36.10:0,36,419	0/0:17,0:17:45.07:0,45,506	0/0:14,0:14:39.08:0,39,438	0/0:11,0:9:12.03:0,12,140	0/0:13,0:13:36.10:0,36,419	0/0:12,0:11:24.07:0,24,279	0/0:44,0:42:99:0,111,1263	0/0:24,0:22:57.16:0,57,660	0/0:18,0:15:33.05:0,33,361	0/0:12,0:11:24.07:0,24,279	0/0:12,0:11:27.06:0,27,303	0/0:7,0:6:15.04:0,15,175	0/0:5,0:5:15.04:0,15,175	0/0:12,0:12:22.15:0,22,274	0/1:8,8:13:99:210,0,113	0/0:15,0:15:33.09:0,33,383	0/0:19,0:19:51.14:0,51,584	0/0:19,0:19:51.13:0,51,581
chr10	62867929	.	CTTTG	C	1156.75	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.005;DP=670;FS=2.786;HRun=0;HaplotypeScore=109.6633;InbreedingCoeff=0.9943;MQ=76.04;MQ0=0;MQRankSum=-0.070;QD=38.56;ReadPosRankSum=1.360;VQSLOD=3.4573;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,114,2824	0/0:10,0:10:21.06:0,21,473	0/0:23,0:22:48.15:0,48,1080	0/0:18,0:18:27.06:0,27,536	1/1:4,26:30:72.25:1252,72,0	0/0:19,0:19:54.18:0,54,1357	0/0:24,0:24:63.22:0,63,1568	0/0:37,0:37:93.32:0,93,2355	0/0:18,0:18:48.16:0,48,1219	0/0:31,0:31:87.30:0,87,2198	0/0:20,0:20:54.19:0,54,1338	0/0:17,0:17:51.16:0,51,1225	0/0:22,0:22:60.21:0,60,1492	0/0:18,0:18:45.15:0,45,1135	0/0:18,0:18:36.12:0,36,907	0/0:24,0:24:63.20:0,63,1528	0/0:30,0:30:75.26:0,75,1905	0/0:16,0:16:45.12:0,45,1088	0/0:26,0:26:60.21:0,60,1494	0/0:21,0:21:63.22:0,63,1581	0/0:31,0:31:84.29:0,84,2065	0/0:22,0:22:51.17:0,51,1250	0/0:21,0:21:51.18:0,51,1296	0/0:20,0:20:48.16:0,48,1211	0/0:30,0:30:81.28:0,81,1996	0/0:31,0:31:75.26:0,75,1898	0/0:36,0:36:99:0,99,2462	0/0:12,0:12:30.10:0,30,762
chr10	62868745	.	A	AC	1115.82	PASS	AB=0.581;AC=13;AF=0.232;AN=56;BaseQRankSum=-1.618;DP=594;FS=0.561;HRun=9;HaplotypeScore=65.2129;InbreedingCoeff=0.8657;MQ=81.65;MQ0=0;MQRankSum=-1.687;QD=8.65;ReadPosRankSum=-2.027;VQSLOD=1.4226;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:94.67:0,95,791	1/1:1,4:5:9.02:96,9,0	0/0:25,0:24:44.81:0,45,376	0/0:16,0:16:32.76:0,33,260	0/0:17,0:17:44.11:0,44,362	0/0:17,0:18:46.93:0,47,383	0/0:20,0:20:50.97:0,51,438	1/1:15,15:30:13.32:340,13,0	0/0:23,0:23:62.98:0,63,544	0/0:30,0:30:83.63:0,84,716	0/0:11,0:11:29.98:0,30,257	0/0:17,0:17:41.97:0,42,360	0/0:22,0:22:56.97:0,57,492	0/0:20,0:20:59.96:0,60,514	0/0:27,0:28:70.96:0,71,591	0/0:30,0:30:80.84:0,81,686	0/1:7,18:25:58.37:199,0,58	1/1:4,18:22:27.07:299,27,0	0/0:16,0:17:38:0,38,317	0/0:14,0:14:26.92:0,27,222	0/0:27,0:27:68.90:0,69,590	1/1:6,1:13:8.86:79,9,0	1/1:12,4:16:23.31:214,23,0	1/1:4,0:18:14.20:71,14,0	0/0:17,0:17:46.98:0,47,389	0/0:22,0:22:47.97:0,48,414	0/0:27,0:29:73.93:0,74,614	0/0:24,0:24:62.96:0,63,547
chr10	62869101	.	T	TAA	98.48	PASS	AC=8;AF=0.174;AN=46;BaseQRankSum=1.744;DP=394;FS=6.626;HRun=0;HaplotypeScore=63.3190;InbreedingCoeff=0.7803;MQ=61.69;MQ0=35;MQRankSum=2.474;QD=8.21;ReadPosRankSum=-3.267;VQSLOD=1.4627;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:2:6.02:86,6,0	1/1:1,0:1:3.01:45,3,0	0/0:41,0:14:22.60:0,23,347	0/0:26,0:12:26.20:0,26,308	./.	0/0:22,0:22:51.15:0,51,732	0/0:15,0:13:39.12:0,39,565	1/1:2,1:1:3.01:50,3,0	0/0:11,0:9:20.98:0,21,263	0/0:23,0:21:59.73:0,60,847	0/0:27,0:27:75.03:0,75,978	0/0:20,0:18:41.98:0,42,622	0/0:15,0:13:30.10:0,30,426	0/0:10,0:7:12.04:0,12,168	0/0:11,0:9:24.08:0,24,347	0/0:16,0:14:42.14:0,42,608	./.	./.	0/0:22,0:20:57.09:0,57,795	0/0:16,0:13:34.91:0,35,493	0/0:11,0:9:24.08:0,24,318	1/1:3,1:1:3.01:37,3,0	./.	./.	0/0:22,0:19:54.18:0,54,809	0/0:26,0:21:54.18:0,54,800	0/0:18,0:15:41.99:0,42,615	0/0:16,0:14:26.62:0,27,381
chr10	62869902	.	TC	T	17185.97	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=3.554;DP=635;FS=7.900;HRun=5;HaplotypeScore=85.6177;InbreedingCoeff=0.9699;MQ=89.07;MQ0=0;MQRankSum=-9.333;QD=29.13;ReadPosRankSum=5.943;VQSLOD=4.7712;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,20:23:48.07:528,48,0	1/1:0,3:3:8.98:88,9,0	0/0:22,0:22:53.36:0,53,750	0/0:23,0:23:45.03:0,45,537	1/1:1,23:24:63.11:698,63,0	1/1:0,24:24:66.19:748,66,0	1/1:0,15:15:42.12:476,42,0	1/1:2,23:25:52.21:744,52,0	1/1:1,21:22:60.17:680,60,0	1/1:1,27:28:78.16:854,78,0	1/1:1,23:24:69.05:738,69,0	1/1:1,12:13:36.10:408,36,0	1/1:1,25:26:66.19:748,66,0	1/1:1,24:25:66.19:747,66,0	1/1:0,25:25:57.09:646,57,0	1/1:0,25:25:66.19:748,66,0	1/1:2,40:42:99:1107,99,0	1/1:2,17:19:45.13:510,45,0	1/1:2,24:26:69.19:775,69,0	1/1:0,22:22:66.10:720,66,0	1/1:3,17:20:48.14:544,48,0	1/1:2,20:22:60.13:666,60,0	1/1:0,23:23:57.16:645,57,0	1/1:1,9:10:27.08:306,27,0	1/1:1,25:26:60.17:680,60,0	1/1:0,37:37:99:1225,108,0	1/1:0,27:27:62.70:714,63,0	1/1:0,14:14:39.11:442,39,0
chr10	62870984	.	T	TA	2711.32	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-8.870;DP=697;FS=0.000;HRun=5;HaplotypeScore=69.9880;InbreedingCoeff=0.9976;MQ=70.70;MQ0=0;MQRankSum=0.048;QD=32.28;ReadPosRankSum=1.309;VQSLOD=4.1702;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,159,1698	0/0:11,0:11:30.06:0,30,313	0/0:9,0:9:21.01:0,21,207	0/0:10,0:10:23.95:0,24,241	0/0:26,0:25:66.12:0,66,680	0/0:22,0:22:60.15:0,60,644	0/0:19,0:19:51.13:0,51,548	0/0:20,0:20:57.13:0,57,601	0/0:31,0:31:81.16:0,81,846	0/0:16,0:16:45.07:0,45,471	0/0:18,0:18:50.97:0,51,512	0/0:24,0:24:72.18:0,72,773	0/0:20,0:20:60.13:0,60,635	0/0:25,0:25:66.12:0,66,689	0/0:25,0:25:75.19:0,75,806	0/0:19,0:19:51.13:0,51,548	0/0:49,0:49:99:0,135,1450	0/0:32,0:32:84.21:0,84,902	0/0:28,0:28:69.16:0,69,734	0/0:25,0:25:63.11:0,63,664	0/0:36,0:36:99:0,108,1142	1/1:1,25:26:66.15:847,66,0	1/1:2,16:18:48.16:626,48,0	1/1:3,37:40:99:1382,105,0	0/0:15,0:15:39.10:0,39,418	0/0:24,0:24:63.16:0,63,676	0/0:26,0:26:75.17:0,75,798	0/0:28,0:28:69.16:0,69,741
chr10	62871194	.	GA	G	5096.28	PASS	AB=0.979;AC=50;AF=0.893;AN=56;BaseQRankSum=5.629;DP=656;FS=14.014;HRun=3;HaplotypeScore=119.2398;InbreedingCoeff=-0.1106;MQ=84.54;MQ0=0;MQRankSum=-1.783;QD=7.77;ReadPosRankSum=9.394;VQSLOD=0.0708;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:36,0:36:80.50:374,81,0	1/1:9,0:9:20.84:86,21,0	0/1:23,1:23:64.84:109,0,65	0/1:19,2:21:23.76:100,0,24	1/1:28,0:28:15.68:227,16,0	1/1:27,0:27:41.28:234,41,0	1/1:28,1:29:9.66:172,10,0	0/1:29,0:28:17.71:134,0,18	1/1:20,0:20:50.21:207,50,0	1/1:26,0:26:35.22:181,35,0	0/1:17,0:17:5.62:137,0,6	0/1:32,0:32:7.06:174,0,7	1/1:28,0:28:35.19:224,35,0	1/1:19,0:19:44.11:173,44,0	1/1:20,0:20:45.94:175,46,0	1/1:33,0:33:30.06:231,30,0	1/1:30,0:29:48.48:255,48,0	1/1:31,0:31:69.49:266,69,0	0/1:19,0:19:5.54:113,0,6	1/1:28,0:28:38.13:219,38,0	1/1:18,0:18:20:144,20,0	1/1:20,0:20:18.35:139,18,0	1/1:17,0:17:44.65:188,45,0	1/1:16,0:16:36.44:143,36,0	1/1:19,0:19:15.39:116,15,0	1/1:25,0:25:29.49:207,29,0	1/1:26,0:25:64.31:282,64,0	1/1:9,0:9:20.85:82,21,0
chr10	62875439	.	G	GA	6386.56	PASS	AB=0.692;AC=37;AF=0.661;AN=56;BaseQRankSum=-14.465;DP=589;FS=4.869;HRun=11;HaplotypeScore=86.6337;InbreedingCoeff=0.6075;MQ=77.75;MQ0=5;MQRankSum=-0.797;QD=16.59;ReadPosRankSum=2.524;VQSLOD=5.7631;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:42:71.28:0,71,206	0/0:1,0:12:20.27:0,20,59	0/1:44,0:28:21.29:21,0,191	0/0:28,0:22:4.73:0,5,78	0/0:4,0:27:42.74:0,43,124	0/1:10,15:28:17.56:327,0,18	1/1:4,23:27:60.12:609,60,0	0/0:6,0:38:65.17:0,65,191	1/1:3,0:12:19.89:112,20,0	1/1:2,21:23:62.70:611,63,0	0/1:5,10:16:7.87:279,0,8	1/1:2,20:22:25.06:434,25,0	1/1:4,10:15:37.65:364,38,0	1/1:6,10:17:12.84:296,13,0	1/1:5,14:19:10.32:308,10,0	1/1:0,16:16:45.09:457,45,0	0/0:3,0:37:59.06:0,59,173	0/0:3,0:20:34.62:0,35,102	0/1:6,7:14:5.94:198,0,6	0/1:3,6:9:5.14:134,0,5	1/1:0,6:6:18.04:183,18,0	1/1:0,1:11:26.02:156,26,0	1/1:1,0:10:25.72:139,26,0	1/1:8,0:28:56.85:286,57,0	1/1:1,10:11:30.06:304,30,0	1/1:4,17:21:24.03:474,24,0	1/1:1,17:18:50.77:481,51,0	1/1:7,8:15:21.04:213,21,0
chr10	62875688	.	AAAAAAAAGAAAAG	A	762.34	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=-9.748;DP=509;FS=7.321;HRun=0;HaplotypeScore=176.0598;InbreedingCoeff=-0.1647;MQ=47.02;MQ0=27;MQRankSum=-0.133;QD=2.11;ReadPosRankSum=0.376;VQSLOD=2.3398;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:26:5.93:6,0,1905	0/1:9,0:9:0.02:0,0,680	0/0:23,0:5:14.49:0,14,225	0/0:42,0:9:0.72:0,1,114	0/1:31,0:31:17.08:17,0,1099	0/0:20,0:20:31.67:0,32,1144	0/0:7,0:7:5.96:0,6,518	0/1:33,0:32:7.35:7,0,1112	0/1:12,0:11:0:0,0,0	0/1:13,0:13:76.35:76,0,487	0/1:16,0:15:19.66:20,0,703	0/1:15,0:15:7.64:8,0,793	0/1:12,0:12:12.73:13,0,752	0/1:12,0:11:4.13:4,0,250	0/1:14,0:14:14.86:15,0,727	0/0:11,0:11:17.89:0,18,605	0/1:32,0:29:17.82:18,0,1460	0/1:19,0:18:40.98:41,0,493	0/1:11,0:10:2.11:2,0,629	0/1:17,0:17:43.75:44,0,698	0/0:6,0:6:8.73:0,9,207	1/1:12,0:12:14.80:112,15,0	1/1:1,12:13:10.30:171,10,0	1/1:20,0:17:22.66:236,23,0	0/0:18,0:18:12.38:0,12,1219	0/0:20,0:20:40.78:0,41,997	0/1:25,0:25:72.01:72,0,986	0/1:17,0:16:60.13:60,0,288
chr10	62875914	.	A	ACTGT	6676.19	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-3.137;DP=707;FS=0.899;HRun=0;HaplotypeScore=116.8144;InbreedingCoeff=0.9997;MQ=77.69;MQ0=1;MQRankSum=-6.975;QD=69.54;ReadPosRankSum=-0.694;VQSLOD=6.2615;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,151,2846	1/1:1,13:14:42.14:1131,42,0	0/0:17,0:17:41.22:0,41,831	0/0:18,0:18:51.14:0,51,906	0/0:24,0:24:60.20:0,60,1115	0/0:21,0:21:63.22:0,63,1183	0/0:19,0:19:48.14:0,48,878	1/1:11,24:35:99:2551,99,0	0/0:20,0:20:57.18:0,57,1049	0/0:34,0:34:93.31:0,93,1732	0/0:23,0:23:66.23:0,66,1249	0/0:28,0:28:81.28:0,81,1538	0/0:23,0:23:66.23:0,66,1244	0/0:26,0:26:72.25:0,72,1367	0/0:30,0:30:84.29:0,84,1595	0/0:31,0:31:90.30:0,90,1677	1/1:2,29:31:72.25:1942,72,0	1/1:0,16:15:39.13:1052,39,0	0/0:21,0:21:60.21:0,60,1129	0/0:21,0:21:54.16:0,54,960	0/0:41,0:41:99:0,117,2212	0/0:23,0:23:66.23:0,66,1253	0/0:14,0:14:33.10:0,33,593	0/0:37,0:37:99:0,105,1951	0/0:21,0:21:60.21:0,60,1138	0/0:23,0:23:63.22:0,63,1184	0/0:32,0:32:93.32:0,93,1765	0/0:10,0:10:30.10:0,30,570
chr10	62877980	.	C	CTCTG	30051.69	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-8.392;DP=800;FS=2.683;HRun=0;HaplotypeScore=138.9093;InbreedingCoeff=0.9893;MQ=66.56;MQ0=0;MQRankSum=-5.473;QD=41.51;ReadPosRankSum=4.021;VQSLOD=5.4573;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,1:45:38.16:635,38,0	1/1:8,7:17:18.53:443,19,0	0/0:28,0:25:35.20:0,35,523	0/0:25,0:24:48.12:0,48,726	1/1:11,0:27:34.27:450,34,0	1/1:9,7:16:15.05:369,15,0	1/1:14,20:35:56.62:1466,57,0	1/1:16,16:37:69.21:1365,69,0	0/0:23,0:23:51.16:0,51,813	1/1:13,24:37:78.27:1772,78,0	1/1:6,13:20:24.08:590,24,0	1/1:9,31:40:75.26:1843,75,0	1/1:5,22:28:63.22:1541,63,0	1/1:11,17:30:45.15:1104,45,0	1/1:15,25:40:72.25:1770,72,0	1/1:14,32:47:93.32:2249,93,0	1/1:8,24:32:66.23:1623,66,0	1/1:2,14:16:30.10:738,30,0	1/1:11,13:24:39.13:937,39,0	1/1:6,19:25:54.19:1316,54,0	1/1:5,26:33:59.38:1473,59,0	1/1:11,17:29:45.15:1106,45,0	1/1:8,16:25:39.13:951,39,0	1/1:2,26:29:78.27:1917,78,0	1/1:6,17:24:45.15:1106,45,0	1/1:9,19:29:63.22:1520,63,0	1/1:11,15:26:51.18:1252,51,0	1/1:4,7:13:21.07:516,21,0
chr10	62878287	.	AT	A	2194.90	PASS	AB=0.924;AC=16;AF=0.286;AN=56;BaseQRankSum=12.097;DP=551;FS=2.881;HRun=13;HaplotypeScore=89.5423;InbreedingCoeff=0.6253;MQ=65.10;MQ0=3;MQRankSum=-3.317;QD=10.65;ReadPosRankSum=0.782;VQSLOD=3.4285;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,35:39:59.53:582,60,0	1/1:4,7:11:17.89:131,18,0	0/1:10,0:9:18.39:18,0,47	0/0:10,0:9:0.26:0,0,21	1/1:2,16:18:38.55:283,39,0	0/0:16,0:15:33.01:0,33,310	0/1:17,2:20:26.33:26,0,213	1/1:11,18:29:47.69:349,48,0	0/0:4,0:9:12.28:0,12,82	0/0:25,0:26:47.91:0,48,452	0/0:21,2:23:17.07:0,17,311	0/0:21,0:22:47.90:0,48,447	0/0:12,0:12:24.02:0,24,224	0/0:17,0:17:29.99:0,30,276	0/0:17,0:19:34.15:0,34,304	0/0:20,1:22:22.98:0,23,361	1/1:5,22:27:65.61:481,66,0	1/1:1,25:26:68.61:503,69,0	0/1:16,2:18:4.30:4,0,279	0/0:23,2:25:4.26:0,4,360	0/0:12,0:13:35.89:0,36,331	0/0:15,0:15:39:0,39,360	0/0:10,0:12:17.86:0,18,159	0/0:25,1:27:32.01:0,32,460	0/0:26,0:26:20.35:0,20,348	0/0:27,2:30:16.13:0,16,447	0/0:18,1:20:32.89:0,33,455	0/1:7,1:8:3.88:4,0,128
chr10	62878448	.	A	AAAT	2414.46	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-2.143;DP=585;FS=2.781;HRun=0;HaplotypeScore=80.3092;InbreedingCoeff=0.9783;MQ=83.02;MQ0=0;MQRankSum=-2.788;QD=41.63;ReadPosRankSum=0.609;VQSLOD=4.4481;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,28:29:60.16:1278,60,0	0/0:8,0:8:24.07:0,24,368	0/0:18,0:18:41.28:0,41,514	0/0:16,0:16:24.92:0,25,407	1/1:3,26:28:65.99:1258,66,0	0/0:19,0:19:57.17:0,57,860	0/0:25,0:25:75.25:0,75,1196	0/0:26,0:26:72.21:0,72,1045	0/0:17,0:17:51.16:0,51,805	0/0:26,0:26:75.26:0,75,1215	0/0:25,0:25:72.22:0,72,1117	0/0:32,0:32:93.30:0,93,1465	0/0:7,0:7:18.06:0,18,290	0/0:23,0:23:69.24:0,69,1121	0/0:17,0:17:48.16:0,48,780	0/0:22,0:22:63.18:0,63,952	0/0:23,0:23:69.18:0,69,1047	0/0:21,0:21:54.95:0,55,892	0/0:19,0:19:48.16:0,48,758	0/0:29,0:29:87.29:0,87,1391	0/0:18,0:18:51.14:0,51,757	0/0:12,0:12:36.12:0,36,583	0/0:20,0:20:54.17:0,54,854	0/0:17,0:17:45.14:0,45,707	0/0:17,0:17:51.15:0,51,784	0/0:28,0:28:84.28:0,84,1344	0/0:38,0:38:99:0,108,1730	0/0:4,0:4:12.02:0,12,170
chr10	62878550	.	TG	T	2547.16	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=10.046;DP=569;FS=4.458;HRun=1;HaplotypeScore=64.0872;InbreedingCoeff=0.8224;MQ=71.32;MQ0=0;MQRankSum=-0.628;QD=31.84;ReadPosRankSum=1.358;VQSLOD=3.3073;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,135,2158	0/0:8,0:8:24.08:0,24,384	0/1:9,0:8:9.94:10,0,254	0/0:8,0:8:8.54:0,9,151	0/0:13,0:13:33.11:0,33,527	0/0:15,0:15:45.14:0,45,696	0/0:29,0:29:87.28:0,87,1362	0/0:25,0:25:66.20:0,66,994	0/0:17,0:17:51.17:0,51,812	0/0:19,0:19:54.17:0,54,805	0/0:9,0:9:24.08:0,24,381	0/0:22,0:22:66.23:0,66,1055	0/0:11,0:11:33.11:0,33,527	0/0:23,0:23:69.24:0,69,1103	0/0:23,0:23:69.24:0,69,1103	0/0:27,0:27:81.28:0,81,1295	0/0:34,0:34:99:0,102,1621	0/0:25,0:25:72.25:0,72,1151	0/0:18,0:18:54.17:0,54,842	0/0:17,0:17:48.16:0,48,765	0/0:28,0:28:84.27:0,84,1317	1/1:0,10:10:27.09:378,27,0	1/1:1,16:17:44.97:629,45,0	1/1:0,44:44:99:1678,120,0	0/0:21,0:21:63.20:0,63,984	0/0:22,0:22:66.23:0,66,1056	0/0:26,0:25:78.27:0,78,1241	0/0:4,0:4:12.04:0,12,192
chr10	62881356	.	GGCCCTCT	G	4119.90	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=11.021;DP=593;FS=4.729;HRun=0;HaplotypeScore=137.3124;InbreedingCoeff=0.9623;MQ=78.53;MQ0=0;MQRankSum=-8.845;QD=25.91;ReadPosRankSum=-0.923;VQSLOD=2.9234;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:12,24:36:42.14:976,42,0	1/1:2,6:8:11.97:193,12,0	0/0:25,0:24:36.11:0,36,928	0/0:31,0:29:38.84:0,39,731	1/1:6,11:17:30.10:665,30,0	0/0:28,0:28:45.15:0,45,1546	0/0:20,0:20:27.08:0,27,904	1/1:12,13:25:38.55:482,39,0	0/0:26,0:26:57.18:0,57,2032	0/0:21,0:21:48.16:0,48,1646	0/0:14,0:14:33.08:0,33,959	0/0:15,0:15:27.08:0,27,860	0/0:21,0:21:51.18:0,51,1886	0/0:24,0:24:54.19:0,54,1990	0/0:29,0:29:66.21:0,66,2213	0/0:30,0:29:66.22:0,66,2287	1/1:8,14:22:27.09:613,27,0	1/1:2,9:11:15.05:349,15,0	0/0:17,0:17:27.07:0,27,835	0/0:19,0:19:45.15:0,45,1524	0/0:43,0:43:99:0,108,3841	1/1:4,9:13:17.73:359,18,0	1/1:2,8:10:14.88:293,15,0	1/1:7,10:17:9.03:190,9,0	0/0:17,0:16:30.09:0,30,1032	0/0:24,0:24:51.15:0,51,1619	0/0:23,0:23:48.12:0,48,1460	0/0:7,0:7:6.02:0,6,223
chr10	62882642	.	ATCC	A	4623.37	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=10.312;DP=648;FS=6.175;HRun=0;HaplotypeScore=96.0262;InbreedingCoeff=0.9949;MQ=85.64;MQ0=0;MQRankSum=-2.877;QD=50.25;ReadPosRankSum=0.053;VQSLOD=6.3895;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:93.32:0,93,2233	1/1:0,7:7:21.07:370,21,0	0/0:24,0:24:68.26:0,68,1485	0/0:19,0:19:50.66:0,51,932	0/0:10,0:10:30.10:0,30,739	0/0:21,0:21:63.21:0,63,1513	0/0:31,0:31:93.32:0,93,2266	1/1:0,35:35:99:1815,102,0	0/0:33,0:33:99:0,99,2382	0/0:22,0:22:66.23:0,66,1610	0/0:7,0:7:18.06:0,18,444	0/0:38,0:38:99:0,111,2633	0/0:26,0:26:75.21:0,75,1778	0/0:25,0:25:75.26:0,75,1844	0/0:29,0:29:87.28:0,87,2072	0/0:25,0:25:75.26:0,75,1823	1/1:0,33:33:84.21:1544,84,0	1/1:0,17:17:48.16:895,48,0	0/0:21,0:21:63.22:0,63,1556	0/0:8,0:8:21.07:0,21,515	0/0:48,0:48:99:0,144,3436	0/0:19,0:19:54.19:0,54,1329	0/0:9,0:9:27.09:0,27,664	0/0:29,0:29:84.29:0,84,2040	0/0:19,0:19:57.20:0,57,1398	0/0:27,0:27:81.28:0,81,1967	0/0:24,0:24:72.25:0,72,1759	0/0:10,0:10:30.10:0,30,706
chr10	62884168	.	CT	C	814.37	PASS	AB=0.900;AC=5;AF=0.089;AN=56;BaseQRankSum=3.727;DP=664;FS=4.824;HRun=11;HaplotypeScore=83.4950;InbreedingCoeff=0.8310;MQ=77.62;MQ0=0;MQRankSum=0.885;QD=11.31;ReadPosRankSum=1.292;VQSLOD=3.4595;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,32:42:52.96:620,53,0	0/1:8,1:9:0.58:1,0,200	0/0:26,0:21:10.67:0,11,281	0/0:16,0:14:11.84:0,12,171	1/1:5,15:21:25.45:315,25,0	0/0:18,0:18:25.27:0,25,456	0/0:26,0:27:67.46:0,67,735	0/0:19,1:20:29.31:0,29,494	0/0:22,0:22:63.08:0,63,642	0/0:31,0:32:75.07:0,75,752	0/0:20,0:20:57.10:0,57,585	0/0:26,0:26:57.55:0,58,712	0/0:19,0:19:54.13:0,54,569	0/0:22,0:22:53.89:0,54,540	0/0:28,0:28:69.02:0,69,704	0/0:33,0:33:84.20:0,84,890	0/0:37,0:36:87.18:0,87,910	0/0:20,0:20:56.99:0,57,565	0/0:18,0:18:12.89:0,13,323	0/0:24,0:24:60.11:0,60,618	0/0:15,0:15:42:0,42,424	0/0:18,0:18:51.12:0,51,536	0/0:21,0:21:57.13:0,57,600	0/0:25,0:25:69.13:0,69,713	0/0:19,0:19:48.11:0,48,505	0/0:37,2:39:37.94:0,38,808	0/0:33,2:35:37.92:0,38,805	0/0:12,0:12:30.04:0,30,303
chr10	62884513	.	G	GGTTGTT	1921.90	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=1.514;DP=805;FS=6.994;HRun=0;HaplotypeScore=170.1956;InbreedingCoeff=0.9891;MQ=62.91;MQ0=6;MQRankSum=-6.269;QD=24.96;ReadPosRankSum=-1.235;VQSLOD=2.5579;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:51:99:0,120,2430	0/0:8,0:8:15.04:0,15,279	0/0:44,0:25:28.84:0,29,534	0/0:45,0:27:32.03:0,32,690	0/0:34,0:34:66.21:0,66,1340	0/0:22,0:23:51.16:0,51,971	0/0:29,0:29:72.20:0,72,1359	0/0:34,0:34:30.10:0,30,582	0/0:24,0:24:66.21:0,66,1326	0/0:33,0:33:66.21:0,66,1268	0/0:25,0:25:51.12:0,51,973	0/0:21,0:21:51.14:0,51,952	0/0:28,0:29:63.22:0,63,1324	0/0:19,0:19:48.16:0,48,1012	0/0:25,0:25:48.14:0,48,938	0/0:27,0:27:60.19:0,60,1223	0/0:45,0:45:99:0,99,1961	0/0:22,0:23:22.51:0,23,952	0/0:28,0:29:42.11:0,42,723	0/0:27,0:27:51.16:0,51,1012	0/0:33,0:32:72.19:0,72,1441	1/1:6,10:20:21:490,21,0	1/1:5,20:26:38.82:872,39,0	1/1:13,17:30:24.08:702,24,0	0/0:22,0:22:51.18:0,51,1066	0/0:40,0:39:66.22:0,66,1351	0/0:25,0:25:54.14:0,54,1084	0/0:11,0:11:21.07:0,21,443
chr10	62884890	.	AG	A	2126.68	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.013;DP=695;FS=14.525;HRun=2;HaplotypeScore=73.6116;InbreedingCoeff=0.9566;MQ=70.85;MQ0=1;MQRankSum=1.210;QD=30.82;ReadPosRankSum=0.848;VQSLOD=2.0157;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,31:35:57.83:995,58,0	0/0:10,0:10:30.09:0,30,429	0/0:18,0:16:32.02:0,32,362	0/0:13,0:13:7.08:0,7,196	1/1:0,34:34:99:1254,102,0	0/0:20,0:20:60.13:0,60,811	0/0:22,0:22:60.19:0,60,860	0/0:28,0:27:69.58:0,70,962	0/0:20,0:20:57.17:0,57,813	0/0:24,0:24:66.21:0,66,959	0/0:28,0:28:81.71:0,82,1144	0/0:29,0:29:84.71:0,85,1193	0/0:19,0:19:57.17:0,57,807	0/0:19,0:19:54.12:0,54,701	0/0:40,0:40:99:0,120,1666	0/0:33,0:33:90.63:0,91,1231	0/0:30,0:30:90.23:0,90,1258	0/0:30,0:30:87.26:0,87,1238	0/0:25,0:25:63.17:0,63,882	0/0:25,0:25:57.01:0,57,767	0/0:27,0:27:81.19:0,81,1104	0/0:21,0:20:59.70:0,60,716	0/0:25,0:25:72.04:0,72,956	0/0:30,0:30:90.19:0,90,1247	0/0:30,0:30:87.26:0,87,1251	0/0:28,0:28:75.47:0,75,1141	0/0:23,0:23:69.21:0,69,988	0/0:9,0:9:27.09:0,27,396
chr10	62884892	.	GA	G	545.56	PASS	AB=0.867;AC=5;AF=0.089;AN=56;BaseQRankSum=11.948;DP=693;FS=13.194;HRun=10;HaplotypeScore=78.3914;InbreedingCoeff=0.8555;MQ=72.03;MQ0=1;MQRankSum=0.528;QD=6.57;ReadPosRankSum=0.298;VQSLOD=0.5447;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:33,0:33:21.31:291,21,0	0/0:10,0:10:27.07:0,27,299	0/0:19,0:17:25.42:0,25,269	0/1:11,1:13:1.28:1,0,127	1/1:37,0:37:63.33:374,63,0	0/0:21,0:21:51.13:0,51,557	0/0:20,0:21:59.98:0,60,635	0/0:26,1:26:37.08:0,37,624	0/0:20,0:20:57.15:0,57,622	0/0:24,0:24:72.12:0,72,769	0/0:27,1:29:57.96:0,58,831	0/0:27,1:28:52.16:0,52,803	0/0:18,0:19:53.90:0,54,553	0/0:18,0:18:39.11:0,39,431	0/0:39,0:39:99:0,102,1115	0/0:31,2:33:55.15:0,55,828	0/0:29,0:30:81.05:0,81,877	0/0:28,0:29:81.05:0,81,877	0/0:25,0:25:60.15:0,60,656	0/0:22,2:24:16.71:0,17,531	0/0:27,0:27:69.17:0,69,754	0/0:21,0:20:42.11:0,42,465	0/0:25,0:25:57.15:0,57,623	0/0:31,0:31:81.18:0,81,882	0/0:30,0:30:87.22:0,87,952	0/0:27,2:29:33.11:0,33,804	0/0:22,0:22:63.17:0,63,697	0/0:9,0:9:27.07:0,27,299
chr10	62885004	.	A	AAAAC	13173.36	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-4.906;DP=677;FS=4.893;HRun=0;HaplotypeScore=107.5368;InbreedingCoeff=0.9999;MQ=67.06;MQ0=1;MQRankSum=-8.171;QD=55.82;ReadPosRankSum=1.671;VQSLOD=6.1102;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,24:28:66.22:1623,66,0	1/1:0,14:16:41.71:1105,42,0	0/0:22,0:22:61.08:0,61,1072	0/0:28,0:27:77.87:0,78,1263	1/1:5,31:37:93.31:2165,93,0	0/0:20,0:20:60.19:0,60,1076	0/0:29,0:29:81.18:0,81,1391	1/1:8,21:28:63.19:1431,63,0	0/0:16,0:16:48.16:0,48,881	0/0:25,0:25:69.23:0,69,1283	0/0:20,0:20:60.18:0,60,1062	0/0:32,0:32:90.28:0,90,1598	0/0:15,0:15:45.14:0,45,808	0/0:18,0:18:54.16:0,54,934	0/0:35,0:35:99:0,99,1794	0/0:22,0:22:66.21:0,66,1193	1/1:3,28:32:72.24:1836,72,0	1/1:3,19:21:36.12:911,36,0	0/0:24,0:24:66.21:0,66,1175	0/0:20,0:20:51.17:0,51,962	0/0:23,0:23:63.22:0,63,1170	1/1:2,14:16:45.06:938,45,0	1/1:1,18:20:45.15:1183,45,0	1/1:0,35:34:78.33:1982,78,0	0/0:25,0:25:72.19:0,72,1220	0/0:26,0:26:75.18:0,75,1277	0/0:28,0:28:81.28:0,81,1480	0/0:13,0:13:36.11:0,36,643
chr10	62888146	.	CAG	C	1008.67	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.370;DP=678;FS=0.000;HRun=0;HaplotypeScore=93.2437;InbreedingCoeff=0.9994;MQ=71.48;MQ0=0;MQRankSum=-1.899;QD=40.35;ReadPosRankSum=2.926;VQSLOD=5.1851;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,154,2780	0/0:13,0:13:39.13:0,39,720	0/0:27,0:23:62.55:0,63,1039	0/0:31,0:29:84.27:0,84,1439	0/0:22,0:22:59.84:0,60,1086	0/0:15,0:15:45.15:0,45,842	0/0:22,0:22:66.23:0,66,1236	0/0:29,0:29:84.27:0,84,1509	1/1:0,25:25:75.25:1104,75,0	0/0:30,0:30:81.28:0,81,1513	0/0:15,0:15:45.14:0,45,803	0/0:23,0:23:66.23:0,66,1225	0/0:16,0:16:48.16:0,48,899	0/0:19,0:19:57.20:0,57,1067	0/0:19,0:19:57.20:0,57,1066	0/0:24,0:24:72.25:0,72,1341	0/0:34,0:34:99:0,102,1851	0/0:28,0:28:81.25:0,81,1452	0/0:21,0:21:63.19:0,63,1126	0/0:20,0:20:60.19:0,60,1072	0/0:32,0:32:93.32:0,93,1733	0/0:21,0:21:63.22:0,63,1178	0/0:21,0:21:63.19:0,63,1108	0/0:27,0:27:78.27:0,78,1443	0/0:16,0:16:45.15:0,45,828	0/0:28,0:28:78.27:0,78,1441	0/0:36,0:36:99:0,108,1975	0/0:10,0:10:30.10:0,30,562
chr10	62889697	.	CACTG	C	2800.13	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.921;DP=687;FS=7.286;HRun=0;HaplotypeScore=111.0069;InbreedingCoeff=0.9854;MQ=54.96;MQ0=23;MQRankSum=-0.932;QD=37.84;ReadPosRankSum=0.291;VQSLOD=3.3217;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,45:47:36.84:1972,37,0	0/0:8,0:8:18.06:0,18,504	0/0:11,0:5:15.05:0,15,388	0/0:11,0:9:21.03:0,21,509	1/1:0,25:25:48.16:949,48,0	0/0:23,0:22:54.19:0,54,1488	0/0:30,0:29:51.18:0,51,1426	0/0:33,0:33:99:0,99,2717	0/0:25,0:24:54.19:0,54,1493	0/0:22,0:20:54.19:0,54,1476	0/0:24,0:24:51.18:0,51,1389	0/0:22,0:21:51.17:0,51,1426	0/0:19,0:18:48.16:0,48,1335	0/0:19,0:18:48.16:0,48,1342	0/0:22,0:22:54.19:0,54,1510	0/0:25,0:25:63.22:0,63,1761	0/0:41,0:41:99:0,105,2918	0/0:18,0:15:42.14:0,42,1175	0/0:23,0:22:66.23:0,66,1814	0/0:31,0:31:69.24:0,69,1891	0/0:29,0:29:81.28:0,81,2212	0/0:22,0:21:45.15:0,45,1244	0/0:26,0:23:60.21:0,60,1679	0/0:31,0:29:66.23:0,66,1815	0/0:20,0:20:54.18:0,54,1435	0/0:35,0:35:99:0,102,2737	0/0:33,0:33:90.14:0,90,2439	0/0:10,0:10:30.10:0,30,807
chr10	62891703	.	G	GA	1922.92	PASS	AB=0.800;AC=41;AF=0.759;AN=54;BaseQRankSum=-1.929;DP=534;FS=4.266;HRun=16;HaplotypeScore=81.6683;InbreedingCoeff=-0.2254;MQ=52.99;MQ0=20;MQRankSum=-0.208;QD=3.70;ReadPosRankSum=-3.247;VQSLOD=0.0348;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:24,24:51:14.25:167,14,0	1/1:8,3:13:10.02:125,10,0	./.	0/0:6,0:4:8.07:0,8,40	1/1:20,3:24:4.83:101,5,0	1/1:8,10:17:9.45:73,9,0	0/1:12,2:14:7.93:29,0,8	0/1:20,7:27:9.34:103,0,9	0/1:6,10:16:6.54:41,0,7	1/1:17,8:24:8.68:145,9,0	0/1:17,2:18:48.95:92,0,49	0/1:14,1:15:8.35:35,0,8	1/1:6,2:13:2.09:32,2,0	1/1:4,4:8:2.98:22,3,0	1/1:4,6:10:2.99:24,3,0	1/1:4,5:9:2.99:24,3,0	0/1:29,4:36:14.04:186,0,14	0/1:18,18:37:8.39:159,0,8	1/1:10,5:15:2.04:88,2,0	1/1:13,2:17:4.72:73,5,0	1/1:12,2:16:5.53:57,6,0	1/1:11,1:11:9.04:80,9,0	1/1:5,1:7:6.31:39,6,0	0/1:5,9:15:2.58:97,0,3	1/1:15,4:18:0.77:86,1,0	0/1:23,3:26:6.68:101,0,7	0/1:25,1:28:7.75:43,0,8	0/1:10,6:12:16.50:37,0,17
chr10	62892414	.	C	CT	1816.22	PASS	AB=0.776;AC=36;AF=0.643;AN=56;BaseQRankSum=-1.241;DP=504;FS=6.483;HRun=15;HaplotypeScore=74.3660;InbreedingCoeff=0.2027;MQ=65.94;MQ0=1;MQRankSum=-0.769;QD=4.66;ReadPosRankSum=-1.702;VQSLOD=1.4007;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,1:28:8.10:0,8,220	0/1:5,1:7:11.45:11,0,43	0/1:16,0:12:0.64:1,0,36	0/1:12,0:8:2.21:2,0,14	0/0:14,0:15:26.35:0,26,145	0/1:8,12:20:5.33:20,0,5	1/1:21,7:27:3.15:201,3,0	0/0:33,0:34:42.46:0,42,257	0/0:15,0:15:16.32:0,16,91	1/1:6,10:17:3.38:155,3,0	1/1:4,6:11:5.99:48,6,0	0/1:8,12:20:13.06:30,0,13	0/1:9,5:18:5.99:59,0,6	1/1:5,11:16:9.46:77,9,0	1/1:7,14:21:0.01:108,0,0	1/1:5,4:9:2.35:24,2,0	0/1:27,4:31:45.62:46,0,156	0/0:21,0:22:39.20:0,39,210	0/1:13,11:25:5.61:145,0,6	1/1:6,2:9:8.13:55,8,0	0/1:10,9:21:1.99:105,0,2	1/1:2,2:5:8.83:62,9,0	1/1:8,3:10:9.37:61,9,0	1/1:11,11:23:20.87:273,21,0	1/1:3,9:13:17.82:138,18,0	1/1:13,12:26:6.65:190,7,0	1/1:6,11:17:7.10:148,7,0	0/1:6,1:10:26.38:26,0,26
chr10	62893484	.	CAAG	C	5609.66	PASS	AB=0.936;AC=23;AF=0.411;AN=56;BaseQRankSum=14.673;DP=643;FS=4.694;HRun=0;HaplotypeScore=92.8533;InbreedingCoeff=0.7511;MQ=74.16;MQ0=1;MQRankSum=0.791;QD=19.75;ReadPosRankSum=1.338;VQSLOD=4.6099;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,25:30:69.23:954,69,0	1/1:5,8:13:14.95:207,15,0	0/0:33,0:26:11.40:0,11,178	0/0:23,0:17:12.01:0,12,201	1/1:6,14:20:36.12:498,36,0	0/0:17,0:17:42.13:0,42,799	0/1:28,2:30:10.75:11,0,1203	1/1:11,9:20:27.09:372,27,0	1/1:8,21:30:57.15:768,57,0	0/0:23,0:23:48.16:0,48,951	0/1:15,1:16:17.41:17,0,392	0/0:30,0:30:57.20:0,57,1131	0/0:17,0:17:42.14:0,42,832	0/0:19,0:19:45.15:0,45,892	0/0:30,1:31:30.76:0,31,1327	0/0:31,1:32:30.77:0,31,1327	1/1:13,24:38:66.18:892,66,0	1/1:3,12:16:36.09:477,36,0	0/0:23,0:22:27.09:0,27,517	0/1:12,1:13:23.41:23,0,272	0/0:20,1:21:3.67:0,4,792	1/1:5,17:22:45.15:622,45,0	1/1:6,9:15:24.08:332,24,0	1/1:8,12:21:33.07:436,33,0	0/0:17,0:17:30.10:0,30,595	0/0:26,0:27:57.20:0,57,1109	0/0:29,1:30:18.72:0,19,1088	0/0:16,0:16:24.08:0,24,476
chr10	62894986	.	GA	G	2678.15	PASS	AB=0.704;AC=32;AF=0.571;AN=56;BaseQRankSum=0.038;DP=589;FS=11.757;HRun=15;HaplotypeScore=69.2217;InbreedingCoeff=0.0358;MQ=58.42;MQ0=5;MQRankSum=3.903;QD=5.72;ReadPosRankSum=2.807;VQSLOD=1.4502;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,27:36:9.11:290,9,0	0/0:11,1:12:7.71:0,8,185	0/1:10,1:7:6.01:6,0,24	0/0:6,1:5:13.14:0,13,71	1/1:12,14:26:19.17:186,19,0	0/1:7,8:15:46.74:87,0,47	0/1:16,10:24:33.76:71,0,34	0/0:18,0:17:29.93:0,30,248	0/1:6,11:19:4.57:86,0,5	1/1:15,14:29:37.98:238,38,0	1/1:5,12:19:20.64:184,21,0	0/1:10,7:16:15.68:75,0,16	1/1:5,14:20:10.49:143,10,0	0/1:8,2:10:17.56:29,0,18	0/1:12,14:26:1.17:104,0,1	0/1:15,15:30:94.47:114,0,94	0/0:44,2:45:59.39:0,59,688	0/0:35,2:36:14.50:0,15,525	0/1:4,12:17:11.89:158,0,12	0/1:5,5:11:0.86:112,0,1	1/1:5,10:17:21.74:127,22,0	1/1:11,12:23:29.19:190,29,0	0/1:17,1:19:12.33:101,0,12	1/1:6,12:18:0.39:127,0,0	0/1:6,10:15:2.72:111,0,3	1/1:11,4:16:23.23:130,23,0	0/1:13,8:21:32.41:124,0,32	0/1:12,9:20:57.45:57,0,58
chr10	62896981	.	C	CGTGTGTGTGTGT	2848.58	PASS	AB=0.996;AC=30;AF=0.556;AN=54;BaseQRankSum=-7.280;DP=596;FS=14.294;HRun=0;HaplotypeScore=249.8730;InbreedingCoeff=-0.1420;MQ=62.37;MQ0=8;MQRankSum=-4.009;QD=5.45;ReadPosRankSum=0.472;VQSLOD=1.1867;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:30:2.02:119,0,2	1/1:7,3:10:3.01:174,3,0	./.	0/1:24,0:18:0:0,0,0	0/1:15,0:15:15.19:142,0,15	0/1:25,0:25:40.41:40,0,277	0/1:29,0:28:31.38:31,0,177	1/1:25,0:24:18.75:199,19,0	1/1:24,1:25:45.11:842,45,0	0/1:14,0:14:18.25:18,0,133	0/0:7,0:7:9.03:0,9,211	0/1:21,0:21:20.72:21,0,503	0/0:24,0:24:15.43:0,15,259	0/1:16,0:16:3.04:3,0,333	0/1:14,0:14:12.52:13,0,217	0/1:15,0:15:5.49:5,0,410	1/1:33,0:33:31.66:463,32,0	1/1:22,0:22:37.75:676,38,0	0/1:17,0:17:18.09:18,0,91	0/0:11,0:11:9.03:0,9,255	0/1:70,0:69:40.89:41,0,393	1/1:12,0:12:8.95:69,9,0	1/1:11,0:11:3.01:40,3,0	0/1:32,0:32:14.23:14,0,202	0/1:23,0:23:44.48:44,0,355	0/1:22,0:22:9.85:10,0,186	0/1:15,0:15:26.33:26,0,219	0/0:14,0:13:8.57:0,9,198
chr10	62897010	.	G	GTGTGTGTGTGTT	1622.76	PASS	AB=0.946;AC=16;AF=0.286;AN=56;BaseQRankSum=-4.146;DP=662;FS=24.658;HRun=0;HaplotypeScore=241.4270;InbreedingCoeff=0.1833;MQ=47.52;MQ0=19;MQRankSum=-4.186;QD=5.80;ReadPosRankSum=-4.263;VQSLOD=0.7738;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:13,24:41:6.26:246,6,0	1/1:6,0:5:3.01:166,3,0	0/0:36,0:14:37.78:0,38,313	0/0:44,0:13:17.92:0,18,149	0/1:5,9:21:20.29:250,0,20	0/1:19,0:19:0.03:0,0,372	0/1:30,0:29:31.83:32,0,242	0/1:19,0:18:16.61:17,0,223	0/1:27,0:27:99:465,0,101	0/0:14,0:14:15.38:0,15,308	0/0:10,0:10:15.02:0,15,290	0/0:31,0:31:7.75:0,8,744	0/0:22,0:22:46.74:0,47,621	0/0:21,0:21:8.20:0,8,495	0/0:14,0:14:30.59:0,31,430	0/0:18,0:18:39.28:0,39,689	0/1:36,0:36:99:240,0,239	0/1:27,0:26:99:268,0,186	0/0:17,0:17:14.88:0,15,289	0/0:10,0:10:14.63:0,15,312	0/0:66,0:64:49.97:0,50,904	1/1:14,0:12:8.95:69,9,0	1/1:10,0:10:2.88:15,3,0	0/1:29,0:29:13.55:14,0,154	0/0:24,0:23:10.13:0,10,484	0/0:28,0:28:17.50:0,18,528	0/0:16,0:16:14.35:0,14,385	0/0:10,0:10:17.96:0,18,291
chr10	62897014	.	GTGTT	G	3185.30	PASS	AB=0.991;AC=30;AF=0.536;AN=56;BaseQRankSum=0.504;DP=650;FS=2.333;HRun=0;HaplotypeScore=150.8651;InbreedingCoeff=0.0295;MQ=48.30;MQ0=20;MQRankSum=0.559;QD=6.66;ReadPosRankSum=-1.578;VQSLOD=2.7570;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:37:4.01:0,4,113	0/0:7,0:6:5.37:0,5,35	0/1:42,0:17:7.71:8,0,264	0/0:47,0:15:5.48:0,5,202	0/0:16,0:16:12.94:0,13,222	1/1:17,1:18:8.53:220,9,0	0/1:29,0:28:30.37:70,0,30	0/0:19,0:18:3.08:0,3,390	0/1:28,0:28:68.38:68,0,220	1/1:9,0:9:23.78:193,24,0	1/1:9,0:9:9.35:81,9,0	0/1:30,1:31:25.80:233,0,26	0/1:21,2:23:11.76:306,0,12	0/1:19,0:19:32.67:89,0,33	1/1:14,0:14:26.96:284,27,0	0/1:18,0:18:1.58:101,0,2	0/0:37,0:37:15.53:0,16,587	0/1:28,0:27:55.07:55,0,532	0/1:16,0:16:6.97:123,0,7	0/1:8,0:8:39.25:47,0,39	1/1:64,1:63:3.37:425,3,0	1/1:16,0:14:8.63:69,9,0	0/0:8,0:8:2.99:0,3,23	0/1:29,0:29:18.93:19,0,27	1/1:21,1:21:9.75:226,10,0	1/1:27,0:27:31.05:344,31,0	1/1:18,0:18:16.51:303,17,0	0/1:9,0:8:13.17:95,0,13
chr10	62897016	.	GTT	G	4231.69	PASS	AB=0.971;AC=41;AF=0.732;AN=56;BaseQRankSum=2.322;DP=644;FS=2.499;HRun=3;HaplotypeScore=133.6518;InbreedingCoeff=0.3110;MQ=48.52;MQ0=18;MQRankSum=2.526;QD=7.88;ReadPosRankSum=0.297;VQSLOD=1.3973;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:37:2.24:0,2,90	0/0:6,0:6:5.50:0,5,36	0/1:43,0:17:7.55:8,0,219	0/0:48,0:16:8.48:0,8,210	0/0:15,0:15:10.06:0,10,169	1/1:16,2:18:9.04:167,9,0	1/1:28,2:29:17.23:174,17,0	0/1:20,0:19:11.78:12,0,386	0/1:28,0:28:99:100,0,186	1/1:9,0:9:23.74:215,24,0	1/1:8,1:9:10.98:111,11,0	1/1:29,2:31:12.80:351,13,0	1/1:21,1:22:25.26:301,25,0	1/1:17,2:19:11.09:164,11,0	1/1:11,3:14:28.71:300,29,0	1/1:17,2:19:34.58:271,35,0	0/1:37,0:37:4.75:5,0,446	0/1:28,0:27:74.70:75,0,357	1/1:14,0:14:16.43:165,16,0	0/1:6,2:8:13.83:79,0,14	1/1:60,1:59:44.64:495,45,0	1/1:16,0:14:8.74:69,9,0	1/1:8,0:8:0.47:1,0,0	0/1:29,0:29:2.48:20,0,2	1/1:20,2:21:26.41:276,26,0	1/1:24,2:26:46.50:394,46,0	1/1:12,6:18:25.09:325,25,0	1/1:7,1:8:15.44:155,15,0
chr10	62897025	.	T	TGCGCGC	2017.20	PASS	AB=0.975;AC=20;AF=0.357;AN=56;BaseQRankSum=2.441;DP=669;FS=25.483;HRun=0;HaplotypeScore=193.6019;InbreedingCoeff=-0.1860;MQ=53.01;MQ0=17;MQRankSum=1.454;QD=5.56;ReadPosRankSum=-0.056;VQSLOD=0.9363;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:38:28.34:0,28,550	0/0:6,0:6:3.99:0,4,134	0/0:52,0:27:75.19:0,75,1408	0/0:52,0:21:47.12:0,47,1068	0/0:14,0:14:21.07:0,21,447	0/1:17,0:17:20.78:51,0,21	0/0:8,0:31:2.07:0,2,13	0/0:20,0:20:54.17:0,54,1135	0/0:27,0:27:18.05:0,18,795	0/1:13,0:13:18.06:255,0,18	0/1:9,0:9:5.24:55,0,5	0/1:30,0:30:83.97:165,0,84	1/1:27,0:27:6.72:267,7,0	0/1:24,0:24:28.63:95,0,29	0/1:14,0:14:9.96:93,0,10	0/1:21,0:21:73.43:269,0,73	0/0:38,0:38:79.15:0,79,1650	0/0:22,0:22:62.91:0,63,1217	0/1:13,0:13:13.25:123,0,13	0/1:8,0:8:23.38:23,0,58	0/1:56,0:54:23.45:289,0,23	0/1:7,11:18:0:0,0,0	0/1:10,0:10:0:0,0,0	1/1:6,17:29:2.48:20,2,0	0/1:19,0:18:38.83:99,0,39	0/1:25,0:25:13.30:222,0,13	0/1:20,0:19:44.30:95,0,44	0/1:8,0:8:31.96:50,0,32
chr10	62897572	.	CCCA	C	1827.57	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=2.255;DP=334;FS=10.374;HRun=0;HaplotypeScore=64.1815;InbreedingCoeff=0.0146;MQ=76.50;MQ0=0;MQRankSum=-2.947;QD=10.33;ReadPosRankSum=-5.044;VQSLOD=0.0919;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:54.16:0,54,1049	0/0:7,0:7:21.07:0,21,438	0/0:14,0:14:25:0,25,518	0/0:13,0:13:20.41:0,20,318	0/0:10,0:10:30.05:0,30,502	0/1:8,0:8:29.09:40,0,29	0/1:21,0:21:14.76:15,0,164	0/0:19,0:19:45.09:0,45,725	0/0:19,0:19:57.15:0,57,1046	0/1:8,0:8:9.59:67,0,10	0/1:7,0:7:19.25:19,0,22	0/1:8,0:8:7.29:7,0,78	0/1:9,0:9:34.62:69,0,35	0/1:9,0:9:30.27:30,0,50	0/1:13,0:13:19.42:84,0,19	0/0:11,0:11:23.93:0,24,230	0/0:22,0:22:57.19:0,57,1171	0/0:16,0:16:48.16:0,48,989	0/1:12,0:12:48.40:48,0,58	0/0:5,0:5:7.17:0,7,43	0/1:10,0:10:14.74:130,0,15	1/1:9,10:19:41.83:534,42,0	1/1:0,13:13:24.03:360,24,0	1/1:0,13:13:30.10:488,30,0	0/1:10,0:10:20.71:38,0,21	0/1:2,0:2:5.49:22,0,5	0/1:13,0:13:28.47:28,0,105	1/1:2,0:2:3:26,3,0
chr10	62897574	.	CA	C	2455.79	PASS	AB=0.917;AC=37;AF=0.661;AN=56;BaseQRankSum=5.015;DP=345;FS=2.735;HRun=1;HaplotypeScore=57.7932;InbreedingCoeff=0.8377;MQ=76.11;MQ0=0;MQRankSum=-0.530;QD=12.16;ReadPosRankSum=-5.886;VQSLOD=-0.2588;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:60.05:0,60,692	0/0:7,0:7:21.07:0,21,278	0/0:14,0:14:18.95:0,19,322	0/0:13,0:13:19.47:0,19,176	0/0:11,0:11:33.04:0,33,373	1/1:5,1:6:9.89:81,10,0	1/1:17,4:21:15.28:177,15,0	0/0:18,0:18:51.04:0,51,552	0/0:20,0:20:60.10:0,60,680	1/1:9,0:9:12.88:109,13,0	1/1:6,1:7:12.84:100,13,0	1/1:8,1:9:17.80:138,18,0	1/1:9,1:10:16.23:111,16,0	1/1:9,0:9:8.66:70,9,0	1/1:12,3:15:32.96:322,33,0	0/1:10,1:11:5.24:34,0,5	0/0:21,0:21:57.14:0,57,718	0/0:16,0:16:48.13:0,48,608	1/1:12,2:14:29.69:262,30,0	1/1:4,1:5:11.05:100,11,0	1/1:12,0:12:11.93:165,12,0	1/1:19,0:19:41.51:299,42,0	1/1:14,0:14:26.55:171,27,0	1/1:13,0:13:29.42:183,29,0	1/1:11,0:11:20.78:167,21,0	1/1:2,0:2:5.75:40,6,0	1/1:11,3:14:5.57:113,6,0	1/1:1,0:1:3:26,3,0
chr10	62897629	.	CT	C	1962.82	PASS	AB=0.704;AC=43;AF=0.768;AN=56;BaseQRankSum=2.578;DP=418;FS=0.659;HRun=15;HaplotypeScore=85.5806;InbreedingCoeff=0.0826;MQ=72.17;MQ0=0;MQRankSum=-0.219;QD=5.11;ReadPosRankSum=4.892;VQSLOD=2.4080;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:14,15:30:53.89:136,0,54	0/1:2,7:9:1.20:95,0,1	0/1:17,1:15:40.36:44,0,40	0/0:10,1:9:9.67:0,10,45	1/1:9,0:11:6.87:30,7,0	1/1:4,8:13:18.82:119,19,0	0/1:17,6:24:21.10:83,0,21	0/1:10,8:19:0.78:113,0,1	0/0:23,0:23:49.14:0,49,394	1/1:4,7:13:21.72:125,22,0	1/1:7,1:8:8.68:55,9,0	0/1:4,5:9:7.62:62,0,8	1/1:7,10:17:11.54:76,12,0	0/1:3,7:11:6.01:59,0,6	1/1:7,7:14:18.04:113,18,0	1/1:3,8:12:11.81:92,12,0	1/1:7,17:26:10.05:144,10,0	1/1:7,4:12:10.73:63,11,0	1/1:6,10:17:12.01:173,12,0	1/1:7,4:12:0.34:57,0,0	1/1:6,6:13:16.77:113,17,0	1/1:9,0:20:13.38:40,13,0	1/1:12,1:18:13.65:50,14,0	1/1:10,0:15:7.95:23,8,0	0/1:6,1:9:6.91:32,0,7	0/1:5,3:8:12.55:46,0,13	1/1:8,10:18:11.67:77,12,0	1/1:2,5:7:14.72:96,15,0
chr10	62899282	.	T	TA	9411.99	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-0.569;DP=505;FS=8.818;HRun=4;HaplotypeScore=81.1215;InbreedingCoeff=0.9670;MQ=64.34;MQ0=0;MQRankSum=-2.733;QD=32.79;ReadPosRankSum=1.086;VQSLOD=5.1539;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:93.24:0,93,1040	0/0:8,0:8:21.05:0,21,230	0/0:20,0:10:6.48:0,6,165	0/0:20,0:13:22.79:0,23,246	0/0:29,0:29:87.19:0,87,948	1/1:2,23:25:63.21:860,63,0	1/1:0,13:13:27.09:369,27,0	0/0:35,0:35:99:0,99,1116	0/0:15,0:15:33.07:0,33,358	1/1:2,20:22:63.17:839,63,0	1/1:1,17:18:47.89:558,48,0	1/1:1,5:6:9.03:123,9,0	1/1:2,11:13:33.10:429,33,0	1/1:0,14:14:30.10:409,30,0	1/1:7,9:16:39.11:501,39,0	1/1:2,12:14:33.11:451,33,0	0/0:34,0:34:71.94:0,72,814	0/0:19,0:18:51.15:0,51,578	1/1:1,13:14:39.12:516,39,0	1/1:0,17:17:44.99:544,45,0	1/1:1,13:14:30.10:410,30,0	1/1:6,1:7:15.04:187,15,0	1/1:0,12:12:36.12:478,36,0	1/1:1,5:6:12.04:164,12,0	1/1:1,15:16:45.11:594,45,0	1/1:1,17:18:48.16:656,48,0	1/1:5,14:19:42.10:546,42,0	1/1:2,21:23:60.18:777,60,0
chr10	62899333	.	TTG	T	3540.47	PASS	AB=0.981;AC=45;AF=0.804;AN=56;BaseQRankSum=8.065;DP=581;FS=1.243;HRun=0;HaplotypeScore=170.6051;InbreedingCoeff=0.5492;MQ=50.32;MQ0=18;MQRankSum=-6.237;QD=7.80;ReadPosRankSum=1.043;VQSLOD=3.4031;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:32,2:34:54.97:55,0,705	1/1:4,8:12:26.55:270,27,0	0/0:42,0:12:9.50:0,10,135	0/0:42,0:14:6.02:0,6,86	0/0:29,1:30:44.21:0,44,778	1/1:28,0:28:36.80:178,37,0	1/1:13,0:15:10.82:51,11,0	1/1:16,18:35:59.39:623,59,0	0/0:5,0:13:12:0,12,105	1/1:15,0:16:24.45:115,24,0	1/1:15,0:15:19.63:93,20,0	0/1:10,0:10:8.29:9,0,8	1/1:12,0:13:9.54:75,10,0	1/1:14,0:14:14.16:69,14,0	1/1:16,0:26:31.25:154,31,0	1/1:11,0:12:26.28:121,26,0	1/1:18,22:38:13.62:536,14,0	1/1:6,14:20:4.74:344,5,0	0/1:12,0:11:0.88:31,0,1	1/1:16,0:17:24.03:111,24,0	1/1:12,0:14:0.37:2,0,0	1/1:13,0:18:22.06:104,22,0	1/1:12,0:13:1.89:12,2,0	1/1:13,0:13:5.66:28,6,0	1/1:20,0:21:11.81:128,12,0	1/1:21,0:22:50.60:241,51,0	1/1:19,0:19:8.32:103,8,0	1/1:12,0:12:18.06:89,18,0
chr10	62899336	.	TG	T	1827.78	PASS	AB=0.727;AC=26;AF=0.464;AN=56;BaseQRankSum=12.685;DP=588;FS=2.727;HRun=1;HaplotypeScore=169.2128;InbreedingCoeff=-0.0854;MQ=51.18;MQ0=20;MQRankSum=-11.388;QD=4.86;ReadPosRankSum=2.251;VQSLOD=0.6198;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:83.57:0,84,1159	0/1:13,0:13:1.95:2,0,102	0/0:39,0:12:9.10:0,9,310	0/1:44,0:15:56.65:57,0,275	0/0:28,0:28:71.53:0,72,1058	0/1:13,14:27:32.35:192,0,32	1/1:12,4:16:5.33:128,5,0	0/0:35,0:35:66.37:0,66,534	0/0:13,0:13:24.04:0,24,261	0/1:7,8:15:37.40:72,0,37	0/1:5,11:16:9.66:75,0,10	0/1:6,4:10:16.32:22,0,16	0/1:6,8:14:14.85:104,0,15	0/1:7,7:15:38.66:81,0,39	1/1:13,13:26:50.02:277,50,0	0/1:5,8:13:1.54:85,0,2	0/0:41,0:38:52.91:0,53,417	0/0:21,0:20:24.22:0,24,161	0/1:7,3:9:19.89:20,0,98	1/1:7,11:18:7.77:151,8,0	0/1:12,1:13:1.43:1,0,51	1/1:9,10:18:2.41:90,2,0	0/1:6,7:13:28.37:74,0,28	0/1:11,3:14:1.96:35,0,2	0/1:10,12:22:26.82:156,0,27	1/1:8,16:23:20.70:188,21,0	0/1:5,13:18:27.77:127,0,28	0/1:7,5:12:45.34:59,0,45
chr10	62899338	.	TGTG	T	2996.31	PASS	AB=0.689;AC=22;AF=0.393;AN=56;BaseQRankSum=9.650;DP=594;FS=9.445;HRun=0;HaplotypeScore=181.7393;InbreedingCoeff=-0.0077;MQ=51.12;MQ0=20;MQRankSum=-10.233;QD=9.70;ReadPosRankSum=7.093;VQSLOD=1.3568;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:90.24:0,90,1706	0/0:12,0:12:16.53:0,17,172	0/0:40,0:13:30.02:0,30,469	0/0:47,0:16:11.38:0,11,401	0/0:27,0:27:68.60:0,69,1461	0/1:14,14:28:56.41:304,0,56	0/1:13,4:17:51.22:69,0,51	0/0:35,0:35:77.40:0,77,751	0/0:12,0:12:21.07:0,21,336	0/1:8,8:16:49.03:201,0,49	0/1:7,11:18:29.71:146,0,30	0/1:6,3:10:9.45:33,0,9	0/1:6,8:14:1.06:155,0,1	0/1:8,7:15:44.16:117,0,44	1/1:12,13:25:29.81:297,30,0	1/1:5,8:13:8.71:220,9,0	0/0:40,0:37:71.66:0,72,600	0/0:20,0:19:22.28:0,22,266	0/1:8,3:10:62.40:62,0,102	0/1:7,11:18:7.52:197,0,8	0/0:14,1:15:10.67:0,11,79	1/1:9,10:18:12.83:223,13,0	0/1:6,7:13:16.58:17,0,46	0/1:11,3:14:15.18:43,0,15	0/1:10,12:22:25.04:269,0,25	1/1:7,16:22:34.35:448,34,0	0/1:7,12:20:36.67:227,0,37	0/1:8,5:13:55.01:150,0,55
chr10	62900294	.	TAA	T	5654.05	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=1.149;DP=369;FS=12.951;HRun=11;HaplotypeScore=53.9388;InbreedingCoeff=0.9307;MQ=71.01;MQ0=3;MQRankSum=2.342;QD=25.94;ReadPosRankSum=6.847;VQSLOD=2.7660;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:29:62.67:0,63,864	0/0:4,0:4:11.95:0,12,114	0/0:32,0:15:17.55:0,18,181	0/0:25,0:10:1.31:0,1,182	0/0:15,0:17:44.54:0,45,530	1/1:3,15:18:36.08:383,36,0	1/1:1,8:9:21.05:224,21,0	0/0:12,0:11:30.08:0,30,422	0/0:10,0:10:30.09:0,30,443	1/1:1,17:18:48.11:511,48,0	1/1:1,14:15:39.09:415,39,0	1/1:0,7:7:12.03:126,12,0	1/1:3,11:14:33.08:351,33,0	1/1:0,13:13:39.10:415,39,0	1/1:2,13:15:39.10:415,39,0	1/1:1,4:5:12.03:128,12,0	0/0:13,0:14:30.55:0,31,309	0/0:6,0:6:11.96:0,12,105	1/1:1,12:13:36.02:362,36,0	1/1:1,8:9:24.05:255,24,0	1/1:1,5:6:12.02:128,12,0	1/1:1,5:7:17.78:172,18,0	1/1:1,9:10:27.06:287,27,0	1/1:2,6:8:15.03:160,15,0	1/1:1,15:16:39.08:415,39,0	1/1:2,14:17:36.04:438,36,0	1/1:0,11:12:23.91:311,24,0	1/1:2,4:6:15.03:159,15,0
chr10	62900369	.	AAACT	A	2606.14	PASS	AB=0.964;AC=21;AF=0.389;AN=54;BaseQRankSum=4.689;DP=405;FS=56.470;HRun=0;HaplotypeScore=78.1092;InbreedingCoeff=-0.0662;MQ=51.63;MQ0=15;MQRankSum=3.773;QD=12.24;ReadPosRankSum=5.792;VQSLOD=0.2585;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:29:53.45:0,53,697	0/0:2,0:2:2.97:0,3,20	0/0:30,0:6:14.59:0,15,181	0/0:25,0:12:2.80:0,3,144	0/0:29,0:29:72.08:0,72,1070	1/1:11,0:10:4.43:196,4,0	0/1:12,1:13:40.82:72,0,41	0/0:24,0:22:40.26:0,40,494	0/0:14,0:12:28.32:0,28,443	0/1:17,2:19:40.71:245,0,41	0/1:13,0:13:5.77:175,0,6	1/1:6,0:5:14.72:146,15,0	0/1:4,0:4:6.08:59,0,6	0/1:8,0:8:4.55:5,0,30	1/1:9,0:9:2.13:73,2,0	0/1:8,0:7:19.78:69,0,20	0/0:13,0:13:21.20:0,21,364	0/0:20,0:19:46.97:0,47,540	0/1:28,0:28:63.30:445,0,63	0/1:12,2:14:9.87:197,0,10	1/1:1,0:1:3.01:35,3,0	0/0:2,0:2:2.22:0,2,7	0/1:12,0:12:20.96:233,0,21	./.	0/1:15,0:15:32.50:195,0,33	0/1:28,0:26:58.74:300,0,59	0/1:15,1:15:2.22:212,0,2	0/1:7,1:7:16.85:108,0,17
chr10	62900370	.	AACT	A	3872.15	PASS	AB=0.929;AC=28;AF=0.519;AN=54;BaseQRankSum=2.117;DP=403;FS=31.803;HRun=0;HaplotypeScore=67.7448;InbreedingCoeff=0.3509;MQ=52.24;MQ0=15;MQRankSum=2.641;QD=18.01;ReadPosRankSum=4.038;VQSLOD=1.4723;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:28:50.20:0,50,592	0/0:1,0:1:2.92:0,3,17	0/0:31,0:7:17.46:0,17,225	0/0:25,0:12:4.38:0,4,145	0/0:30,0:30:67.52:0,68,941	1/1:9,2:10:7.26:238,7,0	0/1:5,8:13:19.26:100,0,19	0/0:24,0:22:21.13:0,21,426	0/0:12,0:10:27.08:0,27,383	0/1:19,0:19:9.62:338,0,10	1/1:12,0:12:23.64:247,24,0	1/1:6,0:5:15.02:175,15,0	1/1:4,0:4:8.82:85,9,0	0/1:8,0:8:21.97:22,0,25	1/1:9,0:9:20.62:169,21,0	0/1:8,0:7:3.81:126,0,4	0/0:12,0:12:21.12:0,21,336	0/0:20,0:19:40.65:0,41,465	0/1:26,2:28:12.92:556,0,13	1/1:14,1:15:13.86:303,14,0	1/1:1,0:1:3.01:35,3,0	1/1:1,0:1:1.82:5,2,0	0/1:12,0:12:0.74:277,0,1	./.	0/1:13,2:15:12.26:264,0,12	1/1:29,0:27:11.42:499,11,0	1/1:16,0:15:18.01:293,18,0	0/1:8,0:7:16.98:140,0,17
chr10	62900371	.	ACT	A	5046.43	PASS	AB=0.864;AC=36;AF=0.692;AN=52;BaseQRankSum=0.020;DP=339;FS=1.112;HRun=0;HaplotypeScore=53.2558;InbreedingCoeff=0.7715;MQ=55.63;MQ0=14;MQRankSum=-0.787;QD=25.11;ReadPosRankSum=1.302;VQSLOD=5.4132;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:18:30.08:0,30,398	./.	0/0:31,0:7:17.40:0,17,221	0/1:26,0:12:0.02:0,0,125	0/0:28,0:28:66.03:0,66,836	1/1:7,2:8:21.05:240,21,0	1/1:10,0:10:9:81,9,0	0/0:16,0:15:22.80:0,23,424	0/0:13,0:11:30.09:0,30,415	1/1:11,4:17:39.10:489,39,0	1/1:2,7:10:24:267,24,0	1/1:6,0:6:18.06:239,18,0	1/1:3,0:3:9.02:106,9,0	1/1:0,6:6:3.01:43,3,0	1/1:2,3:7:21.07:285,21,0	1/1:2,3:6:17.08:191,17,0	0/0:11,0:11:15.24:0,15,287	0/0:17,0:16:29.73:0,30,398	1/1:15,4:21:53.62:623,54,0	1/1:9,3:14:36.09:451,36,0	1/1:0,1:1:3.01:35,3,0	1/1:1,0:1:3:25,3,0	1/1:7,2:9:27.08:341,27,0	./.	1/1:6,2:12:33.03:380,33,0	1/1:14,3:19:53.12:689,53,0	1/1:9,2:12:33.07:409,33,0	0/1:5,2:7:6.57:152,0,7
chr10	62900785	.	AT	A	10100.51	PASS	AB=1.000;AC=39;AF=0.696;AN=56;BaseQRankSum=11.895;DP=566;FS=2.493;HRun=7;HaplotypeScore=68.5382;InbreedingCoeff=0.9368;MQ=61.01;MQ0=0;MQRankSum=-1.576;QD=25.77;ReadPosRankSum=0.665;VQSLOD=5.5871;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,123,1472	0/0:11,0:11:33.02:0,33,376	0/0:3,0:3:2.86:0,3,16	0/1:5,0:5:0.06:0,0,0	0/0:31,0:31:78.14:0,78,930	1/1:4,19:23:60.07:586,60,0	1/1:5,13:18:51.08:505,51,0	0/0:24,0:24:63.19:0,63,778	0/0:18,0:18:51.16:0,51,628	1/1:2,17:18:51.11:519,51,0	1/1:4,16:20:54.06:531,54,0	1/1:4,18:22:57.12:575,57,0	1/1:3,16:19:51.07:508,51,0	1/1:4,19:23:66.08:647,66,0	1/1:2,11:13:39.08:391,39,0	1/1:8,18:26:69.07:666,69,0	0/0:26,0:26:72.20:0,72,875	0/0:17,0:17:48.15:0,48,601	1/1:6,20:26:69.12:688,69,0	1/1:0,17:17:47.98:464,48,0	1/1:6,21:27:66.13:661,66,0	1/1:2,11:13:38.91:370,39,0	1/1:4,16:20:48:467,48,0	1/1:2,16:18:48.06:472,48,0	1/1:5,4:9:12.02:122,12,0	1/1:0,36:36:99:1032,102,0	1/1:11,17:28:63.07:623,63,0	1/1:0,10:10:27.06:275,27,0
chr10	62900859	.	GTC	G	15752.87	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=13.836;DP=674;FS=20.889;HRun=0;HaplotypeScore=102.9852;InbreedingCoeff=0.9926;MQ=81.41;MQ0=1;MQRankSum=-5.787;QD=35.64;ReadPosRankSum=5.076;VQSLOD=5.1184;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,135,2427	0/0:6,0:6:18.06:0,18,327	0/0:21,0:21:55.32:0,55,822	0/0:26,0:23:51.48:0,51,756	0/0:25,0:25:51.09:0,51,866	1/1:3,12:15:36.02:451,36,0	1/1:1,24:25:63.21:902,63,0	0/0:34,0:34:99:0,99,1758	0/0:15,0:15:42.14:0,42,769	1/1:3,30:33:93.28:1305,93,0	1/1:2,16:18:33.11:471,33,0	1/1:3,25:28:66.20:924,66,0	1/1:1,22:23:63.21:902,63,0	1/1:1,27:28:72.24:1031,72,0	1/1:1,24:25:66.22:945,66,0	1/1:2,38:40:99:1547,111,0	0/0:36,0:36:99:0,99,1752	0/0:22,0:22:66.23:0,66,1200	1/1:0,16:16:48.15:669,48,0	1/1:1,15:16:39.13:553,39,0	1/1:0,52:52:99:1846,129,0	1/1:2,20:22:48.16:685,48,0	1/1:0,19:19:42.14:601,42,0	1/1:1,22:23:57.19:816,57,0	1/1:0,7:7:18.06:257,18,0	1/1:5,21:26:69.23:988,69,0	1/1:0,20:20:48.16:687,48,0	1/1:2,4:6:12.04:172,12,0
chr10	62901075	.	T	TCACTGAGGTCAACTGGCAGAGGCA	2069.83	PASS	AB=0.800;AC=19;AF=0.950;AN=20;BaseQRankSum=-1.973;DP=35;FS=6.576;HRun=0;HaplotypeScore=38.5423;InbreedingCoeff=-0.1806;MQ=119.71;MQ0=0;MQRankSum=-1.973;QD=71.37;ReadPosRankSum=-0.625;VQSLOD=1.3954;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,0:1:3.01:47,3,0	./.	1/1:5,1:6:14.41:696,14,0	0/1:6,0:8:27.99:602,0,28	1/1:1,0:1:2.99:24,3,0	./.	./.	./.	./.	1/1:1,0:1:2.97:20,3,0	./.	./.	./.	1/1:1,0:1:3:25,3,0	./.	1/1:2,0:2:6.02:99,6,0	./.	./.	1/1:4,0:4:12.04:383,12,0	./.	1/1:3,0:3:6.02:135,6,0	./.	./.	./.	./.	1/1:1,0:1:3.01:119,3,0	./.	./.
chr10	62903352	.	TA	T	400.64	PASS	AB=0.834;AC=11;AF=0.196;AN=56;BaseQRankSum=1.391;DP=407;FS=8.530;HRun=14;HaplotypeScore=55.3458;InbreedingCoeff=0.1260;MQ=56.87;MQ0=6;MQRankSum=2.279;QD=3.51;ReadPosRankSum=2.283;VQSLOD=-0.4385;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:42,2:45:7.26:0,7,642	0/1:2,1:3:14.25:15,0,14	0/0:13,0:7:14.48:0,14,95	0/0:6,0:4:10.41:0,10,68	0/0:6,0:7:11.85:0,12,98	0/0:20,0:21:44.68:0,45,382	0/0:13,1:14:9.64:0,10,218	0/0:18,0:31:57.09:0,57,356	0/1:17,1:19:22.61:23,0,110	0/0:5,0:5:9.01:0,9,83	0/0:5,0:4:9.01:0,9,83	0/0:18,0:18:32.87:0,33,293	0/0:9,0:9:21.01:0,21,191	0/1:18,1:19:7.92:8,0,198	0/0:11,2:12:0.81:0,1,134	0/0:10,0:10:27.03:0,27,250	0/0:16,0:28:57.39:0,57,340	0/0:12,0:21:17.31:0,17,206	0/1:7,1:10:11.24:11,0,159	0/0:3,0:3:2.96:0,3,19	0/0:18,0:19:26.42:0,26,284	1/1:0,1:1:2.98:21,3,0	0/1:1,2:4:16.85:36,0,17	1/1:8,28:36:36.58:421,37,0	0/0:3,0:3:9.01:0,9,83	0/0:19,0:19:33.02:0,33,302	0/1:7,2:10:2.72:3,0,107	0/1:10,1:8:2.58:3,0,116
chr10	62903535	.	A	AGATGAAGAT	1438.36	PASS	AB=0.889;AC=39;AF=0.696;AN=56;BaseQRankSum=7.803;DP=359;FS=0.668;HRun=0;HaplotypeScore=94.3807;InbreedingCoeff=0.5974;MQ=63.92;MQ0=27;MQRankSum=-3.300;QD=7.53;ReadPosRankSum=0.964;VQSLOD=1.7111;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:27:28.13:0,28,171	0/0:2,0:1:3.01:0,3,35	0/0:23,0:14:41.44:0,41,585	0/0:34,0:21:34.55:0,35,802	0/0:4,0:10:8.26:0,8,32	1/1:13,0:12:11.17:72,11,0	1/1:14,0:14:6.49:92,6,0	0/0:32,0:26:52.02:0,52,646	0/1:7,0:8:29.51:30,0,139	1/1:3,0:1:3.01:30,3,0	1/1:3,0:2:0.23:1,0,0	1/1:9,0:9:15.02:114,15,0	1/1:11,0:11:6.91:101,7,0	1/1:15,0:14:3.48:35,3,0	1/1:10,0:10:5.69:54,6,0	1/1:5,0:5:3.01:46,3,0	0/0:30,0:29:73.83:0,74,1101	0/0:8,0:8:19.62:0,20,336	1/1:9,0:9:11.85:140,12,0	1/1:3,0:3:2.13:5,2,0	1/1:27,0:24:34.17:275,34,0	1/1:6,0:6:9.92:215,10,0	1/1:4,0:4:3.01:69,3,0	1/1:7,16:27:3.01:64,3,0	1/1:1,0:1:0.89:2,1,0	1/1:11,0:11:23.42:191,23,0	1/1:10,0:8:9.79:58,10,0	1/1:2,0:1:3:25,3,0
chr10	62903538	.	T	TGAA	3167.65	PASS	AB=1.000;AC=41;AF=0.759;AN=54;BaseQRankSum=3.865;DP=348;FS=3.425;HRun=0;HaplotypeScore=58.0585;InbreedingCoeff=0.4118;MQ=60.70;MQ0=29;MQRankSum=-5.426;QD=14.27;ReadPosRankSum=3.985;VQSLOD=3.2058;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:27:99:143,0,109	./.	0/0:23,0:14:31.69:0,32,436	0/0:32,0:19:34.16:0,34,609	0/1:10,0:10:5.96:101,0,6	1/1:12,0:11:15.58:233,16,0	1/1:4,10:14:0.50:48,1,0	0/0:31,0:25:33.25:0,33,295	0/1:8,0:8:12.24:12,0,17	1/1:4,0:2:3.01:54,3,0	1/1:3,0:2:6.02:102,6,0	1/1:10,0:10:21.72:331,22,0	1/1:1,10:11:8.84:143,9,0	1/1:1,13:13:2.90:16,3,0	1/1:1,10:11:6.02:103,6,0	1/1:0,5:5:3.01:68,3,0	0/0:30,0:29:39.14:0,39,373	0/0:8,0:8:9.82:0,10,93	1/1:11,0:10:26.89:360,27,0	1/1:3,0:3:3.69:97,4,0	1/1:26,0:22:53.90:619,54,0	1/1:5,1:6:7.33:104,7,0	1/1:2,0:2:3.01:35,3,0	1/1:20,0:20:3.01:38,3,0	1/1:1,0:1:3.01:51,3,0	1/1:11,0:11:7.62:392,8,0	1/1:9,0:7:18.06:260,18,0	1/1:2,0:1:3:25,3,0
chr10	62903592	.	T	TGGAGGA	3148.95	PASS	AB=1.000;AC=34;AF=0.654;AN=52;BaseQRankSum=0.079;DP=225;FS=4.827;HRun=0;HaplotypeScore=72.8305;InbreedingCoeff=0.6530;MQ=53.41;MQ0=3;MQRankSum=-0.843;QD=25.60;ReadPosRankSum=0.016;VQSLOD=2.7825;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:17.52:0,18,322	0/0:2,0:2:5.97:0,6,69	0/0:16,0:14:39.10:0,39,701	0/0:19,0:15:42.14:0,42,842	0/0:7,0:7:18.03:0,18,213	1/1:1,6:7:3.01:71,3,0	0/1:12,0:12:8.76:373,0,9	0/0:14,0:13:36.01:0,36,596	0/1:5,0:5:11.25:11,0,99	1/1:4,0:4:9.02:121,9,0	./.	1/1:3,1:4:2.64:71,3,0	1/1:7,0:6:14.51:183,15,0	1/1:6,0:6:11.98:184,12,0	1/1:10,0:10:23.99:381,24,0	1/1:6,0:6:15.05:229,15,0	0/0:26,0:26:56.08:0,56,1075	0/0:7,0:7:18.02:0,18,313	1/1:3,0:2:3.01:58,3,0	1/1:1,6:7:12.04:152,12,0	1/1:18,0:18:42.10:636,42,0	1/1:2,2:5:3.01:50,3,0	1/1:5,0:5:9.01:112,9,0	1/1:14,0:14:21.07:307,21,0	1/1:3,0:3:4.57:52,5,0	1/1:4,0:4:12.03:151,12,0	1/1:3,0:3:9.03:197,9,0	./.
chr10	62904127	.	TA	T	4560.94	PASS	AC=36;AF=0.667;AN=54;BaseQRankSum=11.669;DP=352;FS=4.830;HRun=7;HaplotypeScore=51.9337;InbreedingCoeff=0.8981;MQ=52.08;MQ0=15;MQRankSum=-8.790;QD=24.13;ReadPosRankSum=0.265;VQSLOD=5.0994;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:23:69.18:0,69,832	0/0:7,0:7:18.06:0,18,226	0/0:16,0:5:10.71:0,11,90	0/0:15,0:6:14.78:0,15,142	0/0:18,0:18:54.17:0,54,678	1/1:3,12:15:41.93:400,42,0	1/1:3,3:5:11.97:105,12,0	0/0:28,0:27:78.16:0,78,912	0/0:7,0:7:18.06:0,18,226	1/1:3,12:13:33.07:332,33,0	1/1:3,7:9:18:172,18,0	1/1:4,7:11:30.04:292,30,0	1/1:0,3:3:9.02:92,9,0	1/1:1,7:8:21.04:209,21,0	1/1:1,5:6:18.03:177,18,0	1/1:2,9:10:27.02:265,27,0	0/0:36,0:36:81.22:0,81,998	0/0:12,0:11:17:0,17,311	1/1:4,7:10:21.04:213,21,0	1/1:3,6:9:26.95:246,27,0	1/1:0,1:1:3.01:31,3,0	./.	1/1:1,2:3:5.97:50,6,0	1/1:3,3:3:2.92:17,3,0	1/1:2,16:18:51.09:507,51,0	1/1:6,18:21:57.12:575,57,0	1/1:6,16:22:60.05:575,60,0	1/1:0,10:10:30.07:305,30,0
chr10	62904147	.	TA	T	5580.43	PASS	AB=0.615;AC=35;AF=0.648;AN=54;BaseQRankSum=11.739;DP=403;FS=15.164;HRun=9;HaplotypeScore=59.6913;InbreedingCoeff=0.8593;MQ=58.73;MQ0=7;MQRankSum=-7.179;QD=24.05;ReadPosRankSum=0.016;VQSLOD=4.0874;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:72.16:0,72,801	0/0:11,0:11:30.08:0,30,336	0/0:17,0:9:11.37:0,11,177	0/0:15,0:6:6.44:0,6,55	0/0:21,0:21:54.14:0,54,605	1/1:4,10:14:27:247,27,0	0/1:3,5:8:8.64:95,0,9	0/0:28,0:26:57.16:0,57,650	0/0:6,0:6:15.04:0,15,173	1/1:1,15:15:45.02:409,45,0	1/1:0,11:11:32.93:285,33,0	1/1:1,10:11:27.01:247,27,0	1/1:0,5:5:9:82,9,0	1/1:1,9:10:30:269,30,0	1/1:1,8:9:24.01:219,24,0	1/1:1,12:13:36.02:329,36,0	0/0:29,0:29:72.21:0,72,831	0/0:13,0:13:33.10:0,33,381	1/1:2,13:15:39.02:357,39,0	1/1:1,15:16:45.02:412,45,0	./.	1/1:0,1:1:3:27,3,0	1/1:0,7:7:21.01:192,21,0	1/1:0,5:4:9:82,9,0	1/1:2,24:26:72.04:658,72,0	1/1:2,20:22:60.02:545,60,0	1/1:1,27:28:78.04:713,78,0	1/1:0,15:15:45.02:411,45,0
chr10	62904381	.	CA	C	11517.45	PASS	AB=1.000;AC=39;AF=0.696;AN=56;BaseQRankSum=12.192;DP=659;FS=17.368;HRun=6;HaplotypeScore=70.7450;InbreedingCoeff=0.9164;MQ=68.92;MQ0=0;MQRankSum=-0.873;QD=26.85;ReadPosRankSum=2.665;VQSLOD=3.4682;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,146,1881	0/0:9,0:9:24.08:0,24,312	0/0:20,0:18:25.39:0,25,400	0/1:12,0:12:15.20:15,0,112	0/0:33,0:33:84.26:0,84,1088	1/1:1,32:33:90.22:967,90,0	1/1:2,22:24:57.14:613,57,0	0/0:34,0:34:90.28:0,90,1171	0/0:22,0:22:66.20:0,66,852	1/1:1,25:26:69.15:733,69,0	1/1:2,13:15:36.09:387,36,0	1/1:2,19:21:51.02:548,51,0	1/1:0,23:23:63.16:677,63,0	1/1:3,16:19:36.09:387,36,0	1/1:3,28:31:78.19:838,78,0	1/1:1,27:28:78.20:838,78,0	0/0:31,0:31:90.29:0,90,1183	0/0:29,0:29:75.23:0,75,971	1/1:0,20:20:60.15:645,60,0	1/1:0,14:14:33.08:355,33,0	1/1:3,22:25:63.16:677,63,0	1/1:0,9:9:24.06:258,24,0	1/1:0,9:9:20.95:226,21,0	1/1:0,21:21:57.14:613,57,0	1/1:0,27:27:66.16:709,66,0	1/1:4,26:30:72.10:743,72,0	1/1:1,24:25:69.17:741,69,0	1/1:0,17:17:51.13:548,51,0
chr10	62905114	.	T	TG	1743.10	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-8.400;DP=670;FS=9.331;HRun=4;HaplotypeScore=158.0006;InbreedingCoeff=0.9975;MQ=82.02;MQ0=0;MQRankSum=2.391;QD=19.59;ReadPosRankSum=2.268;VQSLOD=2.1401;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,34:40:74.09:1015,74,0	0/0:8,0:8:21.06:0,21,237	0/0:35,0:33:48.78:0,49,433	0/0:31,0:26:26.43:0,26,302	1/1:2,25:27:53.13:738,53,0	0/0:17,0:17:47.11:0,47,316	0/0:25,0:25:65.40:0,65,483	0/0:30,0:30:83.26:0,83,958	1/1:22,0:22:35.84:133,36,0	0/0:32,0:32:89.32:0,89,653	0/0:15,0:15:38.71:0,39,288	0/0:21,0:21:53.38:0,53,376	0/0:27,0:27:74.34:0,74,534	0/0:17,0:17:50.40:0,50,359	0/0:41,0:41:99:0,100,716	0/0:25,0:25:71.33:0,71,516	0/0:21,0:21:54.10:0,54,568	0/0:21,0:21:45.04:0,45,469	0/0:20,0:20:59.64:0,60,459	0/0:25,0:25:61.53:0,62,482	0/0:25,0:25:56.29:0,56,395	0/0:18,0:18:50.57:0,51,369	0/0:28,0:28:82.99:0,83,576	0/0:25,0:25:71.35:0,71,504	0/0:21,0:21:59.13:0,59,408	0/0:20,0:20:53.48:0,53,378	0/0:23,0:23:59.37:0,59,425	0/0:9,0:9:25.62:0,26,173
chr10	62905118	.	GT	G	9026.19	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=6.566;DP=659;FS=0.710;HRun=10;HaplotypeScore=137.0571;InbreedingCoeff=0.9862;MQ=79.46;MQ0=1;MQRankSum=-2.515;QD=20.85;ReadPosRankSum=3.110;VQSLOD=3.6744;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:81.11:0,81,541	0/0:8,0:8:24.05:0,24,256	0/0:33,1:32:15.08:0,15,355	0/0:30,0:23:8.25:0,8,233	0/0:28,0:28:68.29:0,68,505	1/1:3,15:18:50.90:429,51,0	1/1:7,18:25:54.28:448,54,0	0/0:32,0:33:90.06:0,90,962	0/0:1,0:19:45.60:0,46,237	1/1:11,24:35:89.28:745,89,0	1/1:5,9:14:30.84:255,31,0	1/1:4,15:19:44.97:386,45,0	1/1:5,20:25:62.98:546,63,0	1/1:4,14:18:44.98:387,45,0	1/1:9,29:38:97.18:815,97,0	1/1:5,19:24:56.98:494,57,0	0/0:21,0:21:54.95:0,55,565	0/0:17,0:17:42.10:0,42,454	1/1:9,13:22:41.96:360,42,0	1/1:5,20:25:63.45:547,63,0	1/1:7,17:24:51.87:433,52,0	1/1:6,13:19:41.94:355,42,0	1/1:8,22:30:74.95:643,75,0	1/1:3,23:26:74.90:636,75,0	1/1:4,18:22:56.92:482,57,0	1/1:6,14:20:44.95:389,45,0	1/1:3,16:20:50.98:442,51,0	1/1:0,9:9:26.99:234,27,0
chr10	62905172	.	AT	A	9693.44	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=14.429;DP=607;FS=0.343;HRun=8;HaplotypeScore=130.1299;InbreedingCoeff=0.9995;MQ=63.25;MQ0=0;MQRankSum=-7.660;QD=23.59;ReadPosRankSum=4.722;VQSLOD=3.3825;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:87.21:0,87,1003	0/0:16,0:16:45.07:0,45,525	0/0:17,0:17:30.04:0,30,321	0/0:21,0:19:48.11:0,48,531	0/0:28,0:28:75.21:0,75,885	1/1:0,16:16:30.03:289,30,0	1/1:1,20:21:45.07:434,45,0	0/0:19,0:19:48.10:0,48,553	0/0:27,1:28:43.18:0,43,766	1/1:4,24:28:72.09:690,72,0	1/1:1,14:15:36.06:347,36,0	1/1:1,25:26:69.06:656,69,0	1/1:2,13:15:33.05:318,33,0	1/1:4,21:25:60.07:573,60,0	1/1:4,23:27:63.09:608,63,0	1/1:2,23:25:69.11:666,69,0	0/0:20,0:20:57.12:0,57,660	0/0:14,0:14:42.06:0,42,489	1/1:1,17:18:51.07:487,51,0	1/1:2,16:18:48.08:463,48,0	1/1:4,14:18:30.04:290,30,0	1/1:3,23:26:69.11:666,69,0	1/1:1,29:30:72.10:695,72,0	1/1:4,20:24:60.08:573,60,0	1/1:3,19:22:45.06:434,45,0	1/1:3,20:23:63.10:608,63,0	1/1:2,23:25:66.10:637,66,0	1/1:0,9:9:27.04:260,27,0
chr10	62905540	.	CTT	C	4697.92	PASS	AB=0.698;AC=38;AF=0.679;AN=56;BaseQRankSum=-6.675;DP=585;FS=1.767;HRun=15;HaplotypeScore=95.3315;InbreedingCoeff=0.6853;MQ=67.04;MQ0=5;MQRankSum=1.440;QD=11.77;ReadPosRankSum=4.884;VQSLOD=4.1636;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:32:50.11:0,50,441	0/0:6,0:13:28.89:0,29,221	0/0:27,0:14:11.98:0,12,105	0/1:23,1:15:2.90:3,0,108	0/0:19,0:28:61.26:0,61,479	0/1:7,12:20:6.45:158,0,6	1/1:12,10:23:33.24:358,33,0	0/0:17,0:27:41.29:0,41,346	0/1:5,0:16:3.46:3,0,43	0/1:8,6:16:0.44:143,0,0	1/1:5,7:15:1.39:138,1,0	1/1:9,5:15:23.83:206,24,0	1/1:6,5:12:1.67:148,2,0	1/1:7,5:12:23.20:204,23,0	1/1:8,13:23:40.36:352,40,0	1/1:2,14:17:23.56:237,24,0	0/0:25,0:37:78.45:0,78,687	0/0:9,0:20:47.79:0,48,425	1/1:8,11:23:11.17:256,11,0	1/1:12,5:17:20.71:205,21,0	1/1:13,8:23:13.03:242,13,0	1/1:5,8:14:24:217,24,0	1/1:7,18:26:31.56:410,32,0	1/1:13,21:34:56.85:501,57,0	1/1:2,6:11:29.17:219,29,0	1/1:9,12:23:5.91:276,6,0	1/1:10,8:21:26.68:259,27,0	1/1:4,5:10:14.61:162,15,0
chr10	62910441	.	TA	T	2663.44	PASS	AB=0.763;AC=35;AF=0.625;AN=56;BaseQRankSum=5.768;DP=627;FS=1.783;HRun=15;HaplotypeScore=74.9109;InbreedingCoeff=0.1639;MQ=84.31;MQ0=2;MQRankSum=-0.807;QD=5.63;ReadPosRankSum=3.637;VQSLOD=2.8219;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:27,4:35:33.93:34,0,266	0/1:12,2:14:11.53:12,0,155	0/0:41,1:29:1.99:0,2,199	0/0:24,0:22:10.83:0,11,77	0/0:19,2:24:8.31:0,8,302	1/1:6,12:18:20.64:135,21,0	0/1:2,8:10:5.63:93,0,6	0/1:20,5:25:55.56:56,0,235	0/0:13,2:15:10.70:0,11,211	1/1:10,12:23:36.44:218,36,0	0/1:9,15:25:9.81:164,0,10	1/1:3,15:19:2.26:131,2,0	1/1:4,23:30:32.93:318,33,0	1/1:6,6:12:8.71:58,9,0	1/1:7,20:27:6.46:224,6,0	1/1:5,15:22:25.59:160,26,0	0/0:24,2:26:6.43:0,6,296	0/1:24,5:29:23.61:24,0,265	1/1:10,17:27:2.96:247,3,0	1/1:7,10:18:25.56:160,26,0	1/1:2,0:4:2:6,2,0	0/0:22,0:22:41.55:0,42,336	0/1:18,2:23:7.23:7,0,194	0/1:15,6:21:67.83:68,0,192	1/1:12,12:25:5.17:152,5,0	0/1:8,13:22:11.64:186,0,12	1/1:4,23:27:9.70:248,10,0	1/1:5,10:16:4.42:139,4,0
chr10	62911540	.	CT	C	10162.81	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=16.037;DP=605;FS=3.437;HRun=6;HaplotypeScore=91.1303;InbreedingCoeff=0.9893;MQ=74.79;MQ0=0;MQRankSum=-0.292;QD=26.60;ReadPosRankSum=1.218;VQSLOD=5.0730;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,112,1444	0/0:7,0:7:18.06:0,18,236	0/0:28,0:24:35.87:0,36,419	0/0:14,0:9:9.91:0,10,117	0/0:26,0:26:72.21:0,72,916	1/1:1,24:25:63.16:677,63,0	1/1:3,12:15:25.32:344,25,0	0/0:31,0:31:72.23:0,72,934	0/0:17,0:17:48.16:0,48,630	1/1:2,20:22:60.59:628,61,0	1/1:1,15:17:45.10:479,45,0	1/1:4,25:29:72.17:765,72,0	1/1:2,15:17:42.11:451,42,0	1/1:2,19:21:54.13:580,54,0	1/1:1,23:24:63.16:677,63,0	1/1:2,12:14:39.08:406,39,0	0/0:33,0:33:93.28:0,93,1194	0/0:27,0:27:78.25:0,78,1020	1/1:7,23:30:69.14:723,69,0	1/1:1,21:23:57.10:598,57,0	1/1:2,17:19:45.11:477,45,0	1/1:2,6:8:18.04:189,18,0	1/1:0,18:18:48.12:515,48,0	1/1:0,13:13:39.10:419,39,0	1/1:2,19:21:51.07:543,51,0	1/1:2,24:26:72.18:773,72,0	1/1:3,25:28:63.03:660,63,0	1/1:4,8:12:24.06:258,24,0
chr10	62912591	.	ACT	A	16068.17	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=13.580;DP=720;FS=3.902;HRun=0;HaplotypeScore=95.3028;InbreedingCoeff=0.9985;MQ=97.21;MQ0=1;MQRankSum=-5.193;QD=34.86;ReadPosRankSum=5.611;VQSLOD=6.8078;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,129,2204	0/0:14,0:14:42.14:0,42,744	0/0:37,0:37:90.23:0,90,1455	0/0:34,0:34:82.46:0,82,1339	0/0:15,0:15:42.14:0,42,746	1/1:0,22:22:54.18:756,54,0	1/1:2,19:21:51.17:714,51,0	0/0:35,0:35:96.30:0,96,1609	0/0:24,0:24:69.21:0,69,1180	1/1:0,21:21:63.16:828,63,0	1/1:0,9:9:21.03:294,21,0	1/1:2,23:25:69.23:960,69,0	1/1:1,30:30:66.22:924,66,0	1/1:4,22:26:57.19:797,57,0	1/1:1,44:45:99:1638,117,0	1/1:2,35:37:45.53:1291,46,0	0/0:23,0:23:66.20:0,66,1132	0/0:30,0:30:84.21:0,84,1414	1/1:1,9:10:27.08:348,27,0	1/1:2,14:16:42.06:543,42,0	1/1:1,44:45:99:1596,114,0	1/1:0,17:17:42.05:544,42,0	1/1:3,9:12:21.07:293,21,0	1/1:0,22:22:66.22:924,66,0	1/1:0,19:19:45.15:630,45,0	1/1:1,26:27:81.24:1098,81,0	1/1:2,30:32:75.25:1050,75,0	1/1:3,21:24:60.20:840,60,0
chr10	62913624	.	C	CT	1350.61	PASS	AB=0.820;AC=14;AF=0.250;AN=56;BaseQRankSum=-1.568;DP=523;FS=3.004;HRun=13;HaplotypeScore=60.0935;InbreedingCoeff=0.1123;MQ=62.33;MQ0=16;MQRankSum=1.507;QD=5.40;ReadPosRankSum=0.920;VQSLOD=2.0574;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:14,30:46:33.56:395,0,34	0/1:4,6:10:17.13:143,0,17	0/0:25,0:9:5.90:0,6,41	0/1:21,0:10:0.94:1,0,20	0/1:7,9:17:6.53:107,0,7	0/1:13,1:16:7.09:7,0,102	0/1:12,1:13:1.09:1,0,137	1/1:12,14:25:35.87:310,36,0	0/1:11,1:15:33.38:33,0,56	0/1:14,1:15:8.10:8,0,89	0/0:16,1:18:36.60:0,37,237	0/0:14,1:20:18.10:0,18,224	0/0:11,1:12:23.73:0,24,161	0/0:11,0:14:22.78:0,23,148	0/1:17,2:19:23.18:23,0,236	0/0:17,0:17:23.30:0,23,161	1/1:7,20:27:39.04:361,39,0	0/1:11,10:19:20.13:118,0,20	0/0:19,0:19:26.59:0,27,236	0/0:18,0:18:32.47:0,32,224	0/0:4,0:5:7.97:0,8,47	0/0:9,0:9:22.72:0,23,142	0/0:21,1:24:9.69:0,10,204	0/0:23,0:25:54.27:0,54,360	0/0:12,0:11:23.76:0,24,163	0/0:27,0:27:17.81:0,18,211	0/0:13,0:11:20.69:0,21,138	0/0:9,0:8:19.89:0,20,129
chr10	62914839	.	TG	T	13479.72	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=9.803;DP=690;FS=0.000;HRun=7;HaplotypeScore=75.7841;InbreedingCoeff=0.9997;MQ=89.39;MQ0=0;MQRankSum=-6.019;QD=25.68;ReadPosRankSum=4.152;VQSLOD=5.3333;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,50:55:99:1377,135,0	0/0:13,0:13:36.12:0,36,453	0/0:27,0:27:59.84:0,60,712	0/0:29,0:29:56.14:0,56,646	1/1:2,21:23:51.11:520,51,0	1/1:4,25:29:63.14:643,63,0	1/1:2,27:29:78.18:796,78,0	0/0:26,0:26:63.19:0,63,772	0/0:21,0:21:57.18:0,57,717	1/1:0,19:19:57.10:573,57,0	1/1:1,14:15:33.07:336,33,0	1/1:5,33:38:84.18:856,84,0	1/1:4,21:25:66.15:672,66,0	1/1:1,23:24:66.15:673,66,0	1/1:4,15:19:36.08:367,36,0	1/1:0,18:18:54.12:551,54,0	0/0:26,0:26:75.23:0,75,932	0/0:23,0:23:66.21:0,66,830	1/1:3,18:21:51.11:520,51,0	1/1:1,13:14:36.08:366,36,0	1/1:1,54:55:99:1529,150,0	1/1:3,17:20:48.10:488,48,0	1/1:4,17:21:48.11:488,48,0	1/1:3,23:26:66.14:673,66,0	1/1:2,15:17:42.09:428,42,0	1/1:2,26:28:78.17:795,78,0	1/1:0,19:19:54.12:551,54,0	1/1:1,9:10:27.06:275,27,0
chr10	62918483	.	AT	A	11466.84	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=11.840;DP=625;FS=1.857;HRun=7;HaplotypeScore=60.6917;InbreedingCoeff=0.9984;MQ=80.71;MQ0=0;MQRankSum=-3.252;QD=27.17;ReadPosRankSum=4.907;VQSLOD=5.3595;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,1:30:59.66:0,60,1052	0/0:8,0:8:24.08:0,24,302	0/0:16,1:17:18.57:0,19,492	0/0:17,0:17:32.37:0,32,327	0/0:24,0:24:69.22:0,69,867	1/1:1,26:27:72.16:735,72,0	1/1:3,25:28:72.16:735,72,0	0/0:40,1:41:77.70:0,78,1274	0/0:16,0:16:48.15:0,48,604	1/1:2,23:25:69.15:704,69,0	1/1:1,19:20:54.12:551,54,0	1/1:2,16:18:42.10:429,42,0	1/1:0,19:19:54.12:551,54,0	1/1:0,22:22:66.15:673,66,0	1/1:1,26:27:72.16:735,72,0	1/1:2,23:25:66.15:673,66,0	0/0:28,0:28:81.25:0,81,1007	0/0:22,0:22:63.20:0,63,793	1/1:1,13:14:39.09:398,39,0	1/1:1,27:28:69.15:704,69,0	1/1:1,12:13:36.08:367,36,0	1/1:1,16:18:44.13:434,44,0	1/1:2,27:29:81.18:826,81,0	1/1:1,25:26:72.16:735,72,0	1/1:1,18:19:54.12:551,54,0	1/1:2,28:30:78.13:779,78,0	1/1:1,19:20:51.11:520,51,0	1/1:0,14:14:36.08:367,36,0
chr10	62918868	.	CTTGTTTTGTT	C	2501.80	PASS	AB=0.550;AC=7;AF=0.125;AN=56;BaseQRankSum=8.714;DP=599;FS=3.956;HRun=0;HaplotypeScore=174.7074;InbreedingCoeff=0.8722;MQ=66.74;MQ0=5;MQRankSum=-3.856;QD=33.36;ReadPosRankSum=-1.440;VQSLOD=3.2459;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:68.99:0,69,3347	1/1:2,9:11:24:647,24,0	0/0:38,0:20:7.14:0,7,517	0/0:53,0:23:21.61:0,22,454	0/0:23,0:23:54.18:0,54,2247	0/0:19,0:19:48.16:0,48,2214	0/0:18,0:18:34.81:0,35,1612	1/1:11,16:26:48.12:986,48,0	0/0:23,0:23:60.21:0,60,2656	0/0:38,0:38:99:0,99,4183	0/0:18,0:18:51.14:0,51,2185	0/0:19,0:19:48.16:0,48,1804	0/0:17,0:17:48.16:0,48,2150	0/0:13,0:13:30.10:0,30,1280	0/0:27,0:27:72.25:0,72,3479	0/0:20,0:20:54.18:0,54,2346	0/1:2,9:11:2.14:269,0,2	1/1:11,15:26:24.08:748,24,0	0/0:17,0:17:39.13:0,39,1444	0/0:19,0:19:42.14:0,42,1996	0/0:8,0:8:15.05:0,15,694	0/0:21,0:21:57.15:0,57,2432	0/0:18,0:18:51.17:0,51,1956	0/0:13,0:13:36.12:0,36,1577	0/0:21,0:21:57.20:0,57,2700	0/0:23,0:23:60.21:0,60,2688	0/0:20,0:20:48.16:0,48,2098	0/0:7,0:7:21.07:0,21,1068
chr10	62919355	.	GA	G	2390.60	PASS	AB=0.683;AC=39;AF=0.722;AN=54;BaseQRankSum=2.193;DP=526;FS=5.694;HRun=16;HaplotypeScore=58.0741;InbreedingCoeff=-0.3792;MQ=55.30;MQ0=16;MQRankSum=2.551;QD=4.62;ReadPosRankSum=5.299;VQSLOD=1.1929;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:12,21:39:12.48:249,12,0	1/1:1,3:5:3.36:19,3,0	0/1:22,1:9:15.23:15,0,75	./.	1/1:6,12:20:1.53:80,2,0	1/1:5,8:15:15.72:81,16,0	0/1:13,12:26:14.04:137,0,14	0/1:16,6:24:27.14:89,0,27	0/1:5,4:9:11.47:27,0,11	1/1:5,6:12:19.56:111,20,0	0/1:5,8:13:10.56:54,0,11	0/1:10,10:21:19.91:88,0,20	0/1:8,7:14:12.37:45,0,12	0/1:7,6:14:11.44:46,0,11	1/1:6,12:19:25.47:149,25,0	1/1:6,8:18:25.48:129,25,0	0/1:11,17:31:2.32:117,0,2	0/1:9,10:19:25.26:101,0,25	0/1:7,3:12:9.31:50,0,9	1/1:12,10:25:22.47:123,22,0	0/1:12,11:22:0.71:90,0,1	1/1:12,2:16:8.97:55,9,0	1/1:8,12:21:31.31:182,31,0	0/1:10,18:28:75.67:165,0,76	1/1:6,6:11:11.46:70,11,0	0/1:12,10:24:17.86:120,0,18	0/1:12,8:21:14.72:127,0,15	1/1:4,1:1:2.94:18,3,0
chr10	62920130	.	CTATCTA	C	1754.98	PASS	AB=0.833;AC=24;AF=0.706;AN=34;BaseQRankSum=-2.823;DP=306;FS=0.000;HRun=0;HaplotypeScore=93.7443;InbreedingCoeff=0.4536;MQ=67.55;MQ0=12;MQRankSum=0.035;QD=12.63;ReadPosRankSum=0.388;VQSLOD=2.4693;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:19:1.39:0,1,19	./.	./.	0/0:26,0:13:2.18:0,2,7	0/0:24,0:22:3.75:0,4,12	./.	./.	1/1:27,0:22:24.07:313,24,0	1/1:5,1:5:5.99:91,6,0	1/1:8,0:8:3.01:63,3,0	./.	1/1:4,4:8:2.92:17,3,0	1/1:9,5:13:6.02:96,6,0	./.	./.	./.	0/1:6,6:12:0:0,0,0	1/1:17,0:17:27.09:470,27,0	1/1:3,3:6:8.99:109,9,0	./.	1/1:5,0:5:3:25,3,0	./.	0/0:11,0:11:0.36:0,0,1	0/1:6,0:6:0:0,0,0	./.	1/1:7,5:12:15.05:238,15,0	1/1:6,5:11:12.03:185,12,0	1/1:3,4:5:12.04:246,12,0
chr10	62920146	.	CTA	C	152.63	PASS	AB=0.929;AC=8;AF=0.160;AN=50;BaseQRankSum=2.776;DP=264;FS=8.714;HRun=0;HaplotypeScore=78.6715;InbreedingCoeff=0.2015;MQ=56.55;MQ0=19;MQRankSum=-0.248;QD=2.46;ReadPosRankSum=4.433;VQSLOD=0.3295;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:3,15:17:5.75:66,6,0	0/0:1,0:1:2.74:0,3,12	./.	0/0:20,1:5:5.97:0,6,66	1/1:6,16:20:12.44:152,12,0	0/0:9,0:6:3.01:0,3,47	0/0:1,0:1:3.01:0,3,48	0/0:37,0:22:56.61:0,57,532	0/0:7,0:6:10.06:0,10,114	0/0:4,0:4:2.67:0,3,143	0/0:4,0:4:8.52:0,9,110	0/1:5,1:6:14.64:15,0,19	0/0:8,1:9:4.34:0,4,80	0/0:6,0:6:3.01:0,3,48	0/0:9,0:9:2.99:0,3,23	0/0:6,0:6:6.02:0,6,101	0/0:7,0:7:2.94:0,3,44	0/0:16,0:16:9.50:0,9,265	0/0:6,0:5:2.54:0,3,75	0/0:8,0:8:3:0,3,25	0/0:3,0:3:2.99:0,3,24	./.	1/1:1,7:8:3.46:24,3,0	./.	0/0:14,0:14:3.01:0,3,48	0/0:7,0:7:9.09:0,9,108	0/0:12,0:12:8.13:0,8,235	0/1:8,0:6:18.23:18,0,32
chr10	62920162	.	CTA	C	46.89	PASS	AB=1.000;AC=16;AF=0.333;AN=48;BaseQRankSum=3.855;DP=266;FS=6.039;HRun=0;HaplotypeScore=84.7287;InbreedingCoeff=0.0958;MQ=46.53;MQ0=21;MQRankSum=-0.539;QD=0.42;ReadPosRankSum=0.973;VQSLOD=1.1528;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:16,3:17:2.59:20,3,0	0/0:1,0:1:3.01:0,3,34	./.	0/0:21,0:4:5.92:0,6,40	1/1:11,6:15:0.41:1,0,0	0/0:10,0:7:6.02:0,6,110	0/0:1,0:1:3.01:0,3,55	0/0:49,0:33:86.44:0,86,1038	0/0:5,0:4:6.02:0,6,96	0/1:2,0:2:0.48:0,0,50	0/0:3,0:3:3.01:0,3,55	0/0:6,0:6:6:0,6,94	0/1:7,0:7:18.74:19,0,40	./.	0/0:8,0:8:3.01:0,3,55	0/0:5,0:5:3.01:0,3,55	0/0:10,0:10:11.97:0,12,220	0/1:25,0:25:35.59:36,0,837	0/0:6,0:4:4.96:0,5,69	./.	./.	1/1:2,0:2:4.99:18,5,0	1/1:5,3:8:3.37:17,3,0	1/1:5,2:7:3.01:33,3,0	0/0:13,0:13:3:0,3,25	0/1:7,0:7:7.15:7,0,159	0/1:8,0:8:20.14:20,0,47	0/1:10,0:9:1.06:1,0,233
chr10	62920164	.	A	ATC	169.92	PASS	AB=0.873;AC=12;AF=0.240;AN=50;BaseQRankSum=2.897;DP=264;FS=4.248;HRun=0;HaplotypeScore=84.3023;InbreedingCoeff=0.1719;MQ=51.16;MQ0=21;MQRankSum=-0.303;QD=2.18;ReadPosRankSum=0.070;VQSLOD=1.5381;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:6,11:16:5.30:15,0,5	0/0:2,0:2:3:0,3,46	0/1:6,0:2:0.05:0,0,0	0/0:23,0:6:5.94:0,6,41	0/1:7,9:15:0.03:0,0,0	0/0:8,2:7:6.02:0,6,91	0/0:1,0:1:3.01:0,3,46	0/0:46,0:30:86.48:0,86,1021	0/0:4,1:4:6.02:0,6,89	0/0:2,0:2:5.99:0,6,68	0/0:3,0:3:3.01:0,3,46	0/0:5,0:5:5.86:0,6,79	0/1:7,0:7:18.74:19,0,40	./.	0/0:8,0:8:3.01:0,3,46	0/0:5,0:5:3.01:0,3,46	0/0:12,0:12:14.95:0,15,206	0/0:25,0:25:31.50:0,32,860	0/0:5,0:3:8.89:0,9,88	./.	./.	1/1:0,2:2:6.02:116,6,0	1/1:3,5:8:3.46:59,3,0	1/1:2,5:7:2.88:57,3,0	0/0:13,0:13:3:0,3,25	0/1:7,0:7:7.13:7,0,171	0/1:7,0:7:20.12:20,0,38	0/0:10,0:9:3.24:0,3,282
chr10	62920180	.	C	CTA	107.88	PASS	AB=0.929;AC=5;AF=0.093;AN=54;BaseQRankSum=0.763;DP=296;FS=0.000;HRun=0;HaplotypeScore=87.5643;InbreedingCoeff=-0.0015;MQ=73.75;MQ0=19;MQRankSum=1.140;QD=3.00;ReadPosRankSum=-0.165;VQSLOD=1.9014;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:18:5.28:0,5,47	0/0:5,0:5:12.04:0,12,171	0/1:15,0:12:10.96:11,0,102	0/0:34,0:11:2.28:0,2,26	0/0:15,0:15:2.53:0,3,21	0/0:9,0:8:5.95:0,6,42	0/0:1,0:1:2.98:0,3,21	0/0:56,0:43:99:0,114,1477	1/1:0,3:3:6.02:94,6,0	0/0:6,0:6:17.68:0,18,114	0/0:3,0:3:1.37:0,1,18	0/0:4,0:4:4.63:0,5,26	0/0:4,0:4:3:0,3,27	./.	0/0:8,0:8:5.95:0,6,42	0/0:5,0:5:2.98:0,3,21	0/0:14,0:14:24.08:0,24,343	0/0:26,0:26:75.22:0,75,1027	0/0:6,0:5:11.86:0,12,82	0/0:2,0:2:2.98:0,3,21	0/0:2,0:2:3:0,3,28	0/0:2,0:2:6.02:0,6,80	0/0:10,0:10:8.48:0,8,107	0/0:6,0:6:3.01:0,3,40	0/0:9,0:9:5.93:0,6,39	0/1:6,0:6:16.01:16,0,32	0/0:8,0:8:11.73:0,12,87	0/1:9,2:10:70.20:93,0,70
chr10	62920182	.	ATC	A	128.58	PASS	AB=0.929;AC=11;AF=0.196;AN=56;BaseQRankSum=2.413;DP=296;FS=0.000;HRun=0;HaplotypeScore=84.2971;InbreedingCoeff=0.0955;MQ=75.52;MQ0=18;MQRankSum=-0.676;QD=1.74;ReadPosRankSum=-0.949;VQSLOD=1.4688;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:18:4.77:21,5,0	0/0:5,0:5:12.04:0,12,201	0/0:14,0:13:12.69:0,13,128	0/0:36,0:11:6.55:0,7,52	1/1:15,0:15:3.15:13,3,0	0/0:9,0:8:5.98:0,6,45	0/0:1,0:1:2.99:0,3,23	0/0:56,0:43:99:0,126,1706	0/0:3,0:3:0.94:0,1,3	0/0:6,0:6:3.79:0,4,81	0/0:3,0:3:2.99:0,3,23	0/1:3,1:4:16.58:39,0,17	0/0:3,0:3:3.01:0,3,30	1/1:3,0:3:2.99:24,3,0	0/0:8,0:8:5.94:0,6,41	0/0:3,1:4:2.99:0,3,23	0/0:15,0:15:30.08:0,30,457	0/0:26,0:26:63.30:0,63,1143	0/1:6,0:5:9.10:9,0,51	0/0:2,0:2:2.99:0,3,23	0/0:2,0:2:3:0,3,26	0/0:2,0:2:6.02:0,6,106	0/0:11,0:11:11.69:0,12,176	0/0:6,0:6:3.01:0,3,52	0/0:8,0:8:5.92:0,6,39	0/1:6,0:6:32.95:33,0,51	0/1:8,0:8:4.10:4,0,70	0/1:9,2:10:60.64:115,0,61
chr10	62920184	.	CTA	C	64.55	PASS	AB=1.000;AC=8;AF=0.143;AN=56;BaseQRankSum=0.916;DP=288;FS=1.221;HRun=0;HaplotypeScore=76.5802;InbreedingCoeff=0.2310;MQ=78.11;MQ0=17;MQRankSum=-1.021;QD=1.27;ReadPosRankSum=-0.105;VQSLOD=1.6109;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,10:18:5.63:68,6,0	0/0:5,0:5:11.77:0,12,110	0/0:16,0:13:19.91:0,20,122	0/0:37,0:12:10.53:0,11,95	1/1:5,8:13:3.42:37,3,0	0/0:9,0:8:6.02:0,6,95	0/0:1,0:1:3.01:0,3,48	0/0:56,0:44:67.15:0,67,683	0/0:3,0:3:6:0,6,53	0/0:6,0:6:12.28:0,12,216	0/0:3,0:3:3.01:0,3,48	0/1:3,0:3:21.29:21,0,42	0/0:2,0:2:3.01:0,3,47	1/1:3,0:3:1.82:5,2,0	0/0:6,0:6:6.02:0,6,89	0/0:4,0:4:3.01:0,3,48	0/0:16,0:16:32.12:0,32,266	0/0:25,1:26:26.52:0,27,613	0/0:6,0:5:12.01:0,12,157	0/0:2,0:2:3.01:0,3,48	0/0:2,0:2:3.01:0,3,41	0/0:2,0:2:6.01:0,6,60	0/0:10,0:10:11.16:0,11,82	0/0:7,0:7:5.75:0,6,41	0/0:6,0:6:6.02:0,6,89	0/0:5,0:5:9.03:0,9,135	0/0:7,0:7:12.04:0,12,171	0/1:11,0:10:50.55:51,0,189
chr10	62924106	.	A	AT	1764.70	PASS	AB=0.836;AC=39;AF=0.696;AN=56;BaseQRankSum=4.476;DP=481;FS=11.491;HRun=17;HaplotypeScore=81.4290;InbreedingCoeff=0.0818;MQ=61.14;MQ0=19;MQRankSum=-3.917;QD=4.19;ReadPosRankSum=-1.793;VQSLOD=-0.4064;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:9,0:20:22.79:115,23,0	0/1:9,1:11:6.31:6,0,51	0/1:24,0:9:0.01:0,0,0	0/1:22,0:8:4.72:9,0,5	1/1:19,0:24:38.52:188,39,0	0/1:4,1:12:0.99:50,0,1	0/1:5,2:9:0.64:53,0,1	0/1:15,3:21:66.01:66,0,71	0/0:11,0:13:1.34:0,1,36	1/1:13,10:24:2.38:133,2,0	1/1:4,0:13:22.83:116,23,0	1/1:6,4:10:11.80:78,12,0	1/1:7,0:7:11.23:60,11,0	1/1:6,5:13:2.03:76,2,0	1/1:12,1:15:20.17:114,20,0	1/1:5,3:12:26:151,26,0	0/0:27,2:29:3.90:0,4,169	0/0:12,0:14:9.88:0,10,105	1/1:19,6:26:12.20:156,12,0	0/1:9,4:19:6.93:92,0,7	1/1:8,2:9:5.98:46,6,0	0/1:7,0:7:5.51:6,0,10	0/1:10,2:11:5.29:38,0,5	1/1:6,1:7:5.83:37,6,0	1/1:8,1:14:1.86:63,2,0	0/1:25,1:28:7.83:124,0,8	0/1:23,1:36:29.99:73,0,30	1/1:4,1:5:10.80:60,11,0
chr10	62924224	.	C	CA	9344	PASS	AB=1.000;AC=39;AF=0.696;AN=56;BaseQRankSum=-10.514;DP=422;FS=12.259;HRun=1;HaplotypeScore=40.4935;InbreedingCoeff=0.8923;MQ=65.68;MQ0=4;MQRankSum=-0.229;QD=34.35;ReadPosRankSum=3.163;VQSLOD=3.1507;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:63.16:0,63,782	0/0:3,0:3:5.98:0,6,59	0/0:8,0:8:24.04:0,24,265	0/1:7,0:4:11.37:11,0,33	0/0:20,0:20:54.16:0,54,675	1/1:1,16:16:45.15:674,45,0	1/1:1,9:9:21.07:314,21,0	0/0:26,0:24:69.22:0,69,894	0/0:14,0:14:36.08:0,36,449	1/1:0,7:7:21.02:288,21,0	1/1:0,15:15:42.14:628,42,0	1/1:1,8:9:24.08:359,24,0	1/1:0,11:11:24.08:358,24,0	1/1:1,7:8:15.05:225,15,0	1/1:1,17:17:42.14:628,42,0	1/1:1,21:22:42.14:628,42,0	0/0:24,0:23:54.13:0,54,664	0/0:30,0:30:87.22:0,87,1086	1/1:1,18:19:51.13:738,51,0	1/1:2,22:23:47.93:667,48,0	1/1:0,5:5:15.05:225,15,0	1/1:0,6:6:18.06:270,18,0	1/1:2,9:11:21.07:314,21,0	1/1:0,13:13:36.12:538,36,0	1/1:1,20:21:45.15:674,45,0	1/1:0,19:17:54.12:743,54,0	1/1:1,22:24:57.19:840,57,0	1/1:1,5:6:15.05:221,15,0
chr10	62926282	.	CTCTCTG	C	3144.06	PASS	AB=0.686;AC=30;AF=0.577;AN=52;BaseQRankSum=7.937;DP=525;FS=0.559;HRun=0;HaplotypeScore=191.6089;InbreedingCoeff=0.5966;MQ=58.22;MQ0=6;MQRankSum=-7.461;QD=10.14;ReadPosRankSum=2.206;VQSLOD=2.8472;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:24:48.16:0,48,1435	0/0:7,0:7:14.75:0,15,418	0/0:25,0:17:19.48:0,19,335	0/0:28,0:19:21.04:0,21,391	0/0:11,0:11:30.10:0,30,829	./.	1/1:12,3:15:5.65:82,6,0	0/0:28,0:28:57.18:0,57,1296	0/0:20,0:20:54.19:0,54,1645	0/1:8,13:21:1.10:674,0,1	1/1:8,2:10:3.01:50,3,0	1/1:15,8:23:0.80:136,1,0	1/1:11,7:18:7.13:253,7,0	1/1:17,9:26:6.02:258,6,0	0/1:7,11:18:5.05:45,0,5	0/1:11,6:17:9.19:205,0,9	0/0:20,0:20:45.15:0,45,1279	0/0:21,0:22:47.79:0,48,1266	1/1:14,2:16:30.66:398,31,0	1/1:13,7:19:1.20:3,1,0	0/1:18,8:26:0.02:0,0,0	./.	1/1:8,6:13:6.02:84,6,0	1/1:8,5:12:6.02:127,6,0	1/1:6,13:19:3.01:63,3,0	1/1:15,5:19:28.19:437,28,0	1/1:7,18:24:11.18:405,11,0	1/1:8,1:9:8.92:104,9,0
chr10	62926288	.	G	GTC	245.84	PASS	AB=0.928;AC=12;AF=0.214;AN=56;BaseQRankSum=4.565;DP=495;FS=2.956;HRun=0;HaplotypeScore=171.0062;InbreedingCoeff=0.1443;MQ=52.52;MQ0=8;MQRankSum=-5.608;QD=1.43;ReadPosRankSum=1.417;VQSLOD=2.0867;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:23:54.16:0,54,722	0/0:7,0:7:17.98:0,18,228	0/0:22,0:15:34.11:0,34,423	0/0:25,0:16:30.09:0,30,388	0/0:12,0:12:33.09:0,33,433	0/0:18,0:17:5.24:0,5,42	0/0:6,3:10:3.24:0,3,20	0/0:30,0:30:90.19:0,90,1132	0/0:23,0:22:63.18:0,63,844	0/1:20,1:20:38.32:38,0,78	0/0:9,0:9:5.49:0,5,34	0/0:21,0:21:1.84:0,2,44	0/0:16,0:16:10.21:0,10,77	0/0:24,0:25:6.84:0,7,153	0/0:17,0:17:4.92:0,5,46	0/1:13,1:14:4.97:5,0,49	0/0:19,0:19:48.09:0,48,636	0/0:21,0:21:56.16:0,56,701	0/1:15,1:16:99:129,0,110	0/1:18,0:17:0.02:0,0,0	0/1:19,3:22:0:0,0,0	0/0:10,0:9:3:0,3,25	0/0:14,0:13:8.64:0,9,52	1/1:12,0:11:5.54:25,6,0	0/1:19,0:19:4.05:4,0,19	0/1:12,6:17:63.83:153,0,64	0/1:24,1:24:1.65:2,0,50	1/1:7,0:7:3.59:12,4,0
chr10	62926302	.	C	CTG	881.13	PASS	AB=0.992;AC=26;AF=0.481;AN=54;BaseQRankSum=8.888;DP=450;FS=14.362;HRun=0;HaplotypeScore=153.5999;InbreedingCoeff=0.3268;MQ=42.31;MQ0=9;MQRankSum=-5.441;QD=3.64;ReadPosRankSum=-0.590;VQSLOD=1.4575;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:24:57.17:0,57,827	0/0:7,0:6:11.99:0,12,183	0/0:11,0:6:14.91:0,15,154	0/0:18,0:6:11.99:0,12,157	0/0:13,0:13:33.09:0,33,483	1/1:15,0:14:0.47:1,0,0	0/0:10,0:10:2.05:0,2,11	0/0:35,0:35:93.26:0,93,1312	0/0:25,0:24:66.21:0,66,987	0/1:20,0:19:84.05:84,0,183	1/1:7,0:7:2.87:25,3,0	1/1:20,1:21:7.55:73,8,0	1/1:14,1:15:21.11:144,21,0	0/1:18,1:19:14.61:102,0,15	1/1:14,0:15:5.75:47,6,0	1/1:12,0:12:7.17:118,7,0	0/0:20,0:20:51.10:0,51,691	0/0:20,0:20:54.57:0,55,779	0/1:14,0:14:99:140,0,122	0/0:16,0:15:2.86:0,3,36	1/1:24,1:25:0.88:2,1,0	./.	1/1:11,0:9:5.94:42,6,0	1/1:11,0:10:6.02:91,6,0	1/1:14,0:14:2.88:45,3,0	0/1:18,0:17:35.99:36,0,279	0/1:23,0:22:39.20:74,0,39	0/1:2,0:2:7.65:28,0,8
chr10	62926330	.	G	GTC	473.05	PASS	AB=0.984;AC=12;AF=0.222;AN=54;BaseQRankSum=2.789;DP=441;FS=1.015;HRun=0;HaplotypeScore=124.6905;InbreedingCoeff=0.3034;MQ=42.27;MQ0=10;MQRankSum=-0.893;QD=4.51;ReadPosRankSum=-0.373;VQSLOD=3.0522;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:22:29.87:0,30,300	0/0:6,0:5:9.03:0,9,108	0/0:31,0:6:8.04:0,8,83	0/0:44,0:14:1.13:0,1,65	0/0:18,0:18:20.56:0,21,204	1/1:7,0:8:0.47:1,0,0	0/0:10,0:11:5.22:0,5,37	0/0:38,1:40:18.43:0,18,650	1/1:14,7:19:33.07:499,33,0	1/1:13,0:14:3.47:26,3,0	./.	0/0:15,0:16:3:0,3,27	0/1:14,0:14:8.92:9,0,20	0/0:13,0:13:2.74:0,3,28	0/0:11,0:11:2.59:0,3,27	0/0:10,0:10:5.37:0,5,56	0/0:21,0:21:48.06:0,48,532	0/0:14,0:15:23.90:0,24,266	0/1:14,0:14:11.44:11,0,57	0/1:14,0:14:0.02:0,0,0	0/1:16,0:16:0:0,0,0	0/0:8,0:7:2.92:0,3,17	0/0:10,0:8:2.98:0,3,21	0/0:8,0:7:0:0,0,0	0/0:11,0:11:2.92:0,3,17	0/0:15,0:14:8.95:0,9,71	0/0:17,0:16:0.41:0,0,37	1/1:3,0:3:3.01:46,3,0
chr10	62926695	.	G	GA	2421.14	PASS	AB=0.801;AC=36;AF=0.643;AN=56;BaseQRankSum=0.896;DP=574;FS=15.021;HRun=14;HaplotypeScore=72.1649;InbreedingCoeff=0.3469;MQ=60.07;MQ0=10;MQRankSum=0.612;QD=5.82;ReadPosRankSum=-0.060;VQSLOD=0.7659;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,1:37:19.84:0,20,220	0/1:9,0:8:5.66:6,0,95	0/1:10,0:5:6.33:6,0,13	0/0:12,0:6:4.27:0,4,23	0/0:21,0:21:31.92:0,32,179	1/1:4,18:21:4.42:165,4,0	0/1:6,10:17:19.23:64,0,19	0/0:34,0:34:28.91:0,29,293	0/1:15,0:14:5.26:5,0,95	1/1:9,15:23:28.21:314,28,0	1/1:5,5:10:11.54:104,12,0	1/1:10,18:27:17.80:195,18,0	1/1:4,11:16:11.79:84,12,0	0/1:7,12:19:7.22:64,0,7	1/1:11,14:24:23.68:186,24,0	1/1:4,12:17:20.80:173,21,0	0/0:24,0:24:59.37:0,59,361	0/0:22,0:27:45.37:0,45,237	1/1:22,16:40:2.42:286,2,0	1/1:5,12:16:12.43:98,12,0	0/1:6,11:16:20.76:75,0,21	1/1:9,0:17:16.90:86,17,0	1/1:6,0:13:16.04:79,16,0	1/1:8,0:26:25.41:126,25,0	1/1:5,9:14:2.88:114,3,0	1/1:12,13:25:13.61:206,14,0	0/1:17,1:18:24.09:128,0,24	0/1:6,8:13:10.27:44,0,10
chr10	62932223	.	TA	T	8587.24	PASS	AB=1.000;AC=47;AF=0.839;AN=56;BaseQRankSum=3.826;DP=464;FS=4.620;HRun=9;HaplotypeScore=48.6939;InbreedingCoeff=0.8701;MQ=61.59;MQ0=3;MQRankSum=-0.263;QD=22.30;ReadPosRankSum=0.698;VQSLOD=5.5545;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:75.21:0,75,857	1/1:1,6:7:15.01:137,15,0	0/0:7,0:6:8.66:0,9,133	0/1:6,0:5:1.81:2,0,27	0/0:25,0:26:69.02:0,69,766	1/1:0,19:19:57.03:522,57,0	1/1:2,7:9:15.01:137,15,0	1/1:7,21:25:59.99:538,60,0	0/0:2,0:16:39.96:0,40,212	1/1:5,23:29:71.06:637,71,0	1/1:1,19:20:54.03:494,54,0	1/1:1,18:19:48.02:439,48,0	1/1:0,15:15:39.02:357,39,0	1/1:2,11:13:33.01:302,33,0	1/1:0,14:14:39.02:357,39,0	1/1:2,16:18:48.02:439,48,0	1/1:1,19:20:42.02:384,42,0	1/1:3,26:28:75.04:686,75,0	1/1:3,15:16:42.01:382,42,0	1/1:2,15:17:45.02:412,45,0	1/1:0,9:9:18.01:165,18,0	1/1:0,6:6:18.01:165,18,0	1/1:0,11:11:33.02:302,33,0	1/1:0,8:8:18.01:165,18,0	1/1:1,16:17:45.02:412,45,0	1/1:1,23:24:69.04:631,69,0	1/1:3,20:23:51.02:467,51,0	1/1:2,4:6:6:55,6,0
chr10	62932481	.	CTG	C	3461.08	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=6.868;DP=646;FS=0.429;HRun=0;HaplotypeScore=93.2494;InbreedingCoeff=0.9665;MQ=83.21;MQ0=0;MQRankSum=-0.274;QD=39.33;ReadPosRankSum=-0.751;VQSLOD=5.3377;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:93.30:0,93,1643	1/1:1,5:6:15.05:210,15,0	0/0:16,0:16:37.37:0,37,629	0/0:23,0:23:54.05:0,54,858	0/0:14,0:14:36.12:0,36,648	0/0:17,0:17:48.15:0,48,835	0/0:28,0:28:81.28:0,81,1459	1/1:1,28:29:84.27:1154,84,0	0/0:27,0:27:78.27:0,78,1382	0/0:28,0:28:84.28:0,84,1480	0/0:17,0:17:42.12:0,42,698	0/0:32,0:32:96.33:0,96,1727	0/0:29,0:29:81.28:0,81,1458	0/0:27,0:27:78.27:0,78,1383	0/0:21,0:21:60.20:0,60,1057	0/0:24,0:24:72.22:0,72,1227	1/1:2,26:28:78.26:1092,78,0	1/1:0,25:25:72.24:1005,72,0	0/0:17,0:17:45.14:0,45,780	0/0:16,0:16:45.14:0,45,781	0/0:61,1:62:99:0,175,3077	0/0:12,0:12:30.10:0,30,539	0/0:10,0:10:27.09:0,27,486	0/0:30,0:30:84.29:0,84,1512	0/0:31,0:31:84.29:0,84,1507	0/0:20,0:20:60.20:0,60,1046	0/0:21,0:21:63.22:0,63,1125	0/0:2,0:2:6.02:0,6,108
chr10	62932761	.	C	CT	1933.97	PASS	AB=0.900;AC=12;AF=0.214;AN=56;BaseQRankSum=-7.402;DP=544;FS=4.326;HRun=10;HaplotypeScore=54.4939;InbreedingCoeff=0.4330;MQ=60.41;MQ0=13;MQRankSum=1.634;QD=12.09;ReadPosRankSum=-1.905;VQSLOD=2.6813;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:24:44.93:0,45,368	1/1:1,13:14:36.08:375,36,0	0/1:13,1:10:10.02:10,0,29	0/1:9,0:4:13.27:29,0,13	0/0:20,0:19:44.84:0,45,358	0/0:17,0:17:40.98:0,41,326	0/0:13,0:12:23.80:0,24,186	1/1:13,28:42:79.56:806,80,0	0/0:17,0:17:32.93:0,33,270	0/0:27,1:27:19.44:0,19,362	0/0:25,0:27:61.71:0,62,483	0/0:18,0:18:44.93:0,45,368	0/0:15,0:15:25.76:0,26,219	0/1:12,1:13:8.03:8,0,148	0/1:12,1:11:5.02:5,0,170	0/0:17,0:17:41.93:0,42,342	1/1:5,23:28:57.14:608,57,0	0/1:8,14:22:21.45:253,0,21	0/0:29,0:28:55.95:0,56,449	0/0:18,0:18:41.94:0,42,344	0/0:19,0:19:47.94:0,48,394	0/0:20,0:20:52.59:0,53,413	0/0:19,0:19:56.93:0,57,467	0/0:17,0:16:35.90:0,36,290	0/0:23,0:22:59.91:0,60,489	0/0:27,0:27:62.91:0,63,517	0/0:12,0:12:35.94:0,36,292	0/1:5,0:4:1.30:1,0,62
chr10	62933874	.	G	GAAA	4907.19	PASS	AB=0.758;AC=42;AF=0.750;AN=56;BaseQRankSum=1.926;DP=520;FS=1.667;HRun=16;HaplotypeScore=126.3766;InbreedingCoeff=0.2550;MQ=50.19;MQ0=8;MQRankSum=-3.117;QD=10.10;ReadPosRankSum=-3.820;VQSLOD=0.9163;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:13,1:29:22.49:82,0,22	0/1:6,0:7:8.42:66,0,8	0/0:9,0:4:5.93:0,6,53	0/0:3,0:2:6.01:0,6,55	1/1:12,0:24:18.87:97,19,0	1/1:12,2:20:18.84:201,19,0	1/1:3,2:12:13.21:120,13,0	0/1:18,0:30:48.57:49,0,68	0/0:8,0:10:15.96:0,16,147	1/1:17,0:24:28.13:252,28,0	1/1:13,1:15:4.17:238,4,0	1/1:14,0:14:17.03:156,17,0	1/1:9,1:13:5.75:199,6,0	1/1:16,5:23:30.59:371,31,0	1/1:13,6:20:21.28:264,21,0	1/1:8,6:15:19.22:232,19,0	0/1:10,0:38:33.74:63,0,34	0/1:13,0:23:10.92:11,0,69	1/1:20,0:20:8.54:276,9,0	1/1:12,8:23:27.43:326,27,0	1/1:18,2:22:27.56:288,28,0	1/1:10,0:15:17.49:192,17,0	1/1:5,6:13:17.92:261,18,0	0/0:10,0:10:0.21:0,0,1	1/1:15,2:21:34:348,34,0	1/1:23,8:31:38.48:426,38,0	1/1:18,2:19:1.50:312,1,0	0/1:8,0:4:17.63:78,0,18
chr10	62936242	.	T	TA	7309.73	PASS	AB=0.610;AC=35;AF=0.625;AN=56;BaseQRankSum=-9.502;DP=608;FS=0.762;HRun=12;HaplotypeScore=63.9439;InbreedingCoeff=0.7559;MQ=63.91;MQ0=1;MQRankSum=0.941;QD=17.08;ReadPosRankSum=1.250;VQSLOD=5.9895;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:33:88.37:0,88,629	0/0:10,0:10:23.83:0,24,175	0/0:11,0:8:8.78:0,9,60	0/0:12,1:11:5.81:0,6,53	0/0:26,0:29:46.68:0,47,433	0/1:7,14:20:17.64:331,0,18	1/1:3,13:16:33.05:321,33,0	0/0:33,1:34:50.34:0,50,518	0/0:13,0:13:38.74:0,39,279	1/1:14,16:29:39.06:380,39,0	1/1:4,12:16:29.90:263,30,0	0/1:6,13:19:0.84:282,0,1	1/1:3,21:25:50.92:481,51,0	1/1:7,18:25:42.07:407,42,0	1/1:7,24:30:44.20:591,44,0	1/1:5,21:27:41.03:547,41,0	0/0:19,0:20:52.49:0,52,356	0/0:16,0:15:20.72:0,21,222	1/1:8,15:22:26.12:401,26,0	1/1:7,20:28:0.19:465,0,0	1/1:4,17:22:32.89:306,33,0	1/1:1,17:18:47.84:423,48,0	1/1:2,13:16:30.77:279,31,0	0/1:6,8:14:3.71:128,0,4	1/1:0,22:24:59.72:544,60,0	1/1:18,25:43:13.08:722,13,0	1/1:5,17:21:33.05:321,33,0	1/1:2,6:8:12.02:117,12,0
chr10	62938356	.	AG	A	15746.20	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=12.465;DP=719;FS=2.005;HRun=2;HaplotypeScore=89.1795;InbreedingCoeff=0.9708;MQ=85.15;MQ0=0;MQRankSum=-5.221;QD=34.61;ReadPosRankSum=5.096;VQSLOD=5.0775;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,114,1679	0/0:14,1:15:3.21:0,3,544	0/0:31,0:31:51.61:0,52,1041	0/0:28,0:28:67.84:0,68,930	0/0:29,0:29:87.29:0,87,1298	1/1:0,32:32:81.26:1051,81,0	1/1:0,22:22:60.20:779,60,0	0/0:40,0:40:99:0,117,1714	0/0:24,0:24:69.22:0,69,1008	1/1:0,34:34:99:1281,102,0	1/1:0,19:19:54.11:680,54,0	1/1:0,27:27:66.21:857,66,0	1/1:0,16:16:42.14:545,42,0	1/1:0,23:23:60.20:779,60,0	1/1:0,32:32:78.25:1013,78,0	1/1:0,23:23:60.20:779,60,0	0/0:29,0:29:87.29:0,87,1303	0/0:29,0:29:84.22:0,84,1208	1/1:0,26:26:78.21:963,78,0	1/1:0,14:14:42.10:527,42,0	1/1:0,16:16:42.14:545,42,0	1/1:1,22:23:66.13:818,66,0	1/1:0,25:25:72.23:933,72,0	1/1:3,26:29:66.21:856,66,0	1/1:0,28:28:84.27:1090,84,0	1/1:1,28:29:84.27:1086,84,0	1/1:0,30:30:74.74:973,75,0	1/1:0,7:7:15.05:195,15,0
chr10	62938824	.	CTTT	C	3472.01	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=2.468;DP=642;FS=3.350;HRun=7;HaplotypeScore=141.9381;InbreedingCoeff=0.9906;MQ=68.60;MQ0=0;MQRankSum=-1.781;QD=35.79;ReadPosRankSum=2.940;VQSLOD=1.7409;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:48:99:0,138,3032	1/1:1,8:9:24.08:355,24,0	0/0:18,0:14:33.06:0,33,543	0/0:20,0:18:28.37:0,28,507	0/0:22,0:22:66.21:0,66,1433	0/0:21,0:21:48.12:0,48,1010	0/0:22,0:22:54.18:0,54,1120	1/1:3,22:25:66.16:924,66,0	0/0:19,0:19:54.19:0,54,1164	0/0:33,0:33:99:0,99,2045	0/0:20,0:20:60.20:0,60,1283	0/0:21,0:21:60.15:0,60,1332	0/0:21,0:21:51.17:0,51,1116	0/0:22,0:22:60.21:0,60,1300	0/0:19,0:19:54.18:0,54,1149	0/0:19,0:19:48.16:0,48,1051	1/1:2,25:27:60.19:919,60,0	1/1:2,34:36:84.28:1274,84,0	0/0:22,0:22:60.19:0,60,1237	0/0:22,0:22:60.19:0,60,1271	0/0:28,0:28:75.16:0,75,1494	0/0:13,0:13:39.08:0,39,798	0/0:23,0:23:60.68:0,61,1318	0/0:24,0:24:57.20:0,57,1247	0/0:33,0:33:87.29:0,87,1881	0/0:23,0:23:63.21:0,63,1351	0/0:21,0:21:60.20:0,60,1298	0/0:10,0:10:12.04:0,12,268
chr10	62938844	.	TGTGC	T	12080.22	PASS	AB=1.000;AC=39;AF=0.722;AN=54;BaseQRankSum=3.739;DP=624;FS=3.498;HRun=0;HaplotypeScore=126.1462;InbreedingCoeff=0.9484;MQ=63.49;MQ0=2;MQRankSum=1.121;QD=28.16;ReadPosRankSum=1.183;VQSLOD=4.4555;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,102,2345	0/0:11,0:11:21.04:0,21,397	0/1:11,0:6:0:0,0,0	./.	0/0:20,0:20:42.12:0,42,913	1/1:5,20:25:36.12:604,36,0	1/1:6,19:25:30.10:500,30,0	0/0:30,0:30:54.04:0,54,1020	0/0:18,0:18:42.13:0,42,983	1/1:8,24:32:75.23:1229,75,0	1/1:10,9:19:27.09:453,27,0	1/1:5,20:25:57.19:957,57,0	1/1:5,13:18:30.10:503,30,0	1/1:4,19:23:48.16:804,48,0	1/1:5,11:16:33.04:514,33,0	1/1:3,16:19:30.10:504,30,0	0/0:29,0:29:60.11:0,60,1298	0/0:33,0:33:66.17:0,66,1508	1/1:13,12:25:36.06:492,36,0	1/1:6,13:19:45.15:749,45,0	1/1:5,21:26:45.15:755,45,0	1/1:2,9:11:18.06:302,18,0	1/1:9,16:25:42.07:705,42,0	1/1:4,20:24:39.13:655,39,0	1/1:10,21:31:35.95:572,36,0	1/1:5,20:25:63.15:926,63,0	1/1:4,19:23:45.15:755,45,0	1/1:2,5:7:6.02:101,6,0
chr10	62938846	.	TGC	T	1918.39	PASS	AB=0.990;AC=22;AF=0.393;AN=56;BaseQRankSum=10.223;DP=607;FS=27.649;HRun=0;HaplotypeScore=133.1481;InbreedingCoeff=-0.4793;MQ=63.81;MQ0=2;MQRankSum=0.145;QD=4.51;ReadPosRankSum=8.399;VQSLOD=0.9970;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:41:99:0,123,2064	0/0:10,0:10:27.06:0,27,414	0/1:9,0:5:19.01:19,0,88	0/1:9,0:7:16.03:16,0,30	0/0:20,0:20:60.13:0,60,969	0/1:25,0:25:93.01:93,0,129	0/1:25,0:25:69.21:69,0,171	0/0:29,0:29:81.07:0,81,1171	0/0:18,0:18:54.17:0,54,936	0/1:30,0:31:99:201,0,126	0/1:16,0:16:63.02:63,0,137	0/1:24,1:25:75.98:161,0,76	0/1:17,0:17:77.95:78,0,94	0/1:23,0:23:27.32:137,0,27	0/1:16,0:16:86.87:87,0,99	0/1:18,0:18:8.10:87,0,8	0/0:30,0:30:72.16:0,72,1208	0/0:33,0:33:87.24:0,87,1481	0/1:23,0:23:72.30:72,0,271	0/1:17,1:19:29.57:129,0,30	0/1:26,0:26:99:123,0,101	0/1:11,0:11:47.93:48,0,55	0/1:23,2:25:99:120,0,156	0/1:24,0:24:99:105,0,105	0/1:28,0:28:93.37:93,0,188	1/1:23,1:24:23.79:248,24,0	0/1:23,0:23:85.18:123,0,85	0/1:7,0:7:12.04:12,0,49
chr10	62940873	.	TTTTGTTTGTTTGTTTGTTTG	T	25611.38	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=14.616;DP=605;FS=3.472;HRun=0;HaplotypeScore=312.4325;InbreedingCoeff=0.9146;MQ=60.37;MQ0=2;MQRankSum=-12.213;QD=71.14;ReadPosRankSum=5.278;VQSLOD=3.4505;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:51:99:0,102,5700	0/0:7,0:7:21.07:0,21,1644	0/0:28,0:22:33.10:0,33,1928	0/0:14,0:13:21.07:0,21,1302	0/0:6,0:31:87.30:0,87,5095	1/1:4,21:25:57.20:3091,57,0	1/1:7,9:16:12.04:651,12,0	0/0:34,0:34:68.58:0,69,3842	0/0:25,0:25:60.21:0,60,5172	1/1:12,20:32:54.05:2504,54,0	1/1:5,12:17:24.08:870,24,0	1/1:6,10:16:18.06:976,18,0	1/1:5,14:19:15.05:813,15,0	1/1:4,11:15:24.08:1301,24,0	1/1:1,8:9:9.03:488,9,0	1/1:5,20:25:45.15:2440,45,0	0/0:31,0:31:75.26:0,75,6436	0/0:21,0:21:54.19:0,54,4258	1/1:15,9:24:27.06:1162,27,0	1/1:4,10:14:18.06:898,18,0	1/1:5,11:16:9.03:488,9,0	1/1:0,8:8:21.07:965,21,0	1/1:7,15:22:39.13:2021,39,0	1/1:10,8:18:3.01:99,3,0	1/1:5,8:13:15.05:813,15,0	1/1:5,19:24:51.16:2132,51,0	1/1:7,31:37:69.24:3742,69,0	1/1:7,2:9:3.01:157,3,0
chr10	62941456	.	TG	T	5612.20	PASS	AC=36;AF=0.667;AN=54;BaseQRankSum=18.464;DP=495;FS=3.859;HRun=1;HaplotypeScore=267.6087;InbreedingCoeff=0.9767;MQ=88.05;MQ0=0;MQRankSum=-16.556;QD=22.27;ReadPosRankSum=5.782;VQSLOD=4.4469;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,117,1836	0/0:11,0:11:33.10:0,33,501	0/0:29,0:29:84.24:0,84,1240	0/0:15,0:15:36.12:0,36,574	0/0:14,0:14:42.14:0,42,667	1/1:2,15:17:47.57:397,48,0	1/1:3,8:11:31.21:226,31,0	0/0:41,0:41:99:0,123,1916	0/0:37,0:37:99:0,111,1742	1/1:2,10:12:30.38:258,30,0	1/1:2,5:7:8.79:85,9,0	1/1:4,20:24:70.98:563,71,0	1/1:2,23:25:74.23:590,74,0	1/1:3,14:17:50.94:427,51,0	1/1:2,17:19:50.40:405,50,0	1/1:0,32:32:93.47:811,93,0	0/0:29,0:29:87.30:0,87,1384	0/0:27,0:27:78.27:0,78,1236	1/1:0,6:6:17.92:153,18,0	1/1:1,11:12:27.90:203,28,0	1/1:1,5:6:17.48:134,17,0	1/1:2,11:13:32.81:211,33,0	1/1:2,2:4:8.80:58,9,0	1/1:5,2:7:20.20:139,20,0	1/1:0,11:11:31.52:245,32,0	1/1:3,10:13:37.96:297,38,0	1/1:0,16:16:47.98:411,48,0	./.
chr10	62941459	.	AGGCGGATGTCTTGGTTATTCATT	A	38220.78	PASS	AC=36;AF=0.667;AN=54;BaseQRankSum=18.786;DP=483;FS=2.843;HRun=0;HaplotypeScore=377.6207;InbreedingCoeff=0.9581;MQ=90.74;MQ0=0;MQRankSum=-17.072;QD=160.59;ReadPosRankSum=7.164;VQSLOD=3.6919;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,126,12793	0/0:11,0:11:33.11:0,33,3246	0/0:31,0:31:93.32:0,93,5573	0/0:16,0:16:45.15:0,45,3276	0/0:15,0:15:45.14:0,45,3673	1/1:2,15:17:51.15:2791,51,0	1/1:3,8:11:33.09:1501,33,0	0/0:38,0:38:99:0,114,8571	0/0:36,0:36:99:0,108,10333	1/1:1,10:11:33.11:1837,33,0	1/1:1,5:6:18.06:800,18,0	1/1:4,20:24:72.23:3711,72,0	1/1:1,23:24:72.24:4087,72,0	1/1:0,14:14:42.14:2505,42,0	1/1:0,17:18:51.18:2954,51,0	1/1:0,32:32:96.33:5727,96,0	0/0:29,0:29:87.30:0,87,8813	0/0:27,0:27:78.27:0,78,7805	1/1:0,6:6:18.06:1076,18,0	1/1:0,11:11:27.09:1477,27,0	1/1:0,5:5:15.05:844,15,0	1/1:1,11:12:36.08:1678,36,0	1/1:1,2:3:9.03:364,9,0	1/1:2,2:4:3.01:118,3,0	1/1:0,11:11:33.11:1879,33,0	1/1:3,10:13:39.13:1999,39,0	1/1:0,16:16:48.16:2872,48,0	./.
chr10	62942533	.	A	ATT	3511.64	PASS	AB=0.767;AC=38;AF=0.679;AN=56;BaseQRankSum=-2.285;DP=436;FS=9.129;HRun=14;HaplotypeScore=59.5365;InbreedingCoeff=0.5310;MQ=71.66;MQ0=3;MQRankSum=-0.788;QD=12.32;ReadPosRankSum=-1.364;VQSLOD=1.3425;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:32:74.40:0,74,614	0/0:4,0:4:5.91:0,6,50	0/0:27,0:16:0:0,0,38	0/0:22,0:14:1.39:0,1,11	1/1:7,0:9:5.36:33,5,0	1/1:7,6:13:18.06:236,18,0	1/1:5,3:8:9.03:114,9,0	0/0:19,0:20:23.38:0,23,228	0/1:14,1:16:3.62:4,0,227	1/1:8,2:15:20.98:222,21,0	1/1:3,1:4:3.01:39,3,0	1/1:3,8:11:12.04:157,12,0	1/1:7,2:14:13.90:135,14,0	1/1:8,6:17:10.95:351,11,0	1/1:5,7:12:15.05:196,15,0	1/1:9,7:18:19.91:203,20,0	0/0:19,0:24:40.33:0,40,284	0/0:18,0:19:35.38:0,35,287	1/1:15,3:17:4.30:250,4,0	1/1:6,2:7:8.98:98,9,0	1/1:6,5:12:6.02:79,6,0	0/1:4,0:4:13.18:13,0,19	1/1:2,0:7:10.37:36,10,0	0/1:5,0:25:3.84:97,0,4	1/1:11,6:19:34.65:344,35,0	1/1:6,12:21:32.43:369,32,0	1/1:7,11:19:26.45:323,26,0	0/1:3,7:10:4.03:215,0,4
chr10	62942808	.	T	TA	3898.73	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-8.147;DP=324;FS=7.407;HRun=10;HaplotypeScore=34.2192;InbreedingCoeff=0.8888;MQ=68.38;MQ0=2;MQRankSum=-0.631;QD=21.19;ReadPosRankSum=-0.845;VQSLOD=3.7653;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:53.91:0,54,443	0/0:2,0:2:5.99:0,6,49	0/0:10,0:8:14.94:0,15,119	0/0:6,0:3:5.99:0,6,48	0/0:10,0:10:23.96:0,24,197	1/1:1,19:19:48.12:512,48,0	1/1:3,7:10:21.05:224,21,0	0/0:44,0:44:92.80:0,93,755	0/0:6,0:6:14.98:0,15,123	1/1:4,6:10:18.05:192,18,0	1/1:0,8:8:19.29:195,19,0	1/1:2,5:7:9.02:96,9,0	1/1:2,8:10:18.05:192,18,0	1/1:3,2:5:6.02:64,6,0	1/1:1,8:9:21.05:224,21,0	1/1:1,5:7:17.88:174,18,0	0/0:24,0:24:35.77:0,36,442	0/0:15,0:15:38.94:0,39,320	1/1:5,10:15:29.81:299,30,0	1/1:3,4:7:12.03:128,12,0	1/1:2,6:8:12.03:128,12,0	1/1:0,6:6:15.44:146,15,0	1/1:1,3:4:6.02:64,6,0	1/1:0,4:4:12.03:128,12,0	1/1:1,9:10:21.04:218,21,0	1/1:4,11:16:14.27:333,14,0	1/1:3,8:11:24.06:256,24,0	1/1:5,12:17:11.45:327,11,0
chr10	62942936	.	AAG	A	8651.98	PASS	AB=0.857;AC=39;AF=0.696;AN=56;BaseQRankSum=8.942;DP=413;FS=22.594;HRun=0;HaplotypeScore=69.7755;InbreedingCoeff=0.8855;MQ=77.72;MQ0=2;MQRankSum=-6.175;QD=35.03;ReadPosRankSum=2.713;VQSLOD=4.6695;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:81.25:0,81,1451	0/1:5,1:6:24.85:25,0,257	0/0:26,0:21:50.39:0,50,760	0/0:21,0:14:12.87:0,13,321	0/0:15,0:15:39.13:0,39,712	1/1:2,11:13:33.10:454,33,0	1/1:5,11:16:36.12:514,36,0	0/0:25,0:25:60.20:0,60,1071	0/0:9,0:9:24.08:0,24,440	1/1:3,12:15:39.12:540,39,0	1/1:0,6:6:9.03:129,9,0	1/1:2,10:12:33.11:468,33,0	1/1:2,4:5:15.05:211,15,0	1/1:4,6:10:30.10:429,30,0	1/1:0,16:16:48.16:687,48,0	1/1:1,13:14:42.13:583,42,0	0/0:21,0:21:57.17:0,57,1011	0/0:21,0:21:63.11:0,63,1051	1/1:1,15:16:45.15:637,45,0	1/1:0,11:11:30.10:430,30,0	1/1:2,18:19:36.08:492,36,0	1/1:0,4:4:12.04:172,12,0	1/1:1,11:12:27.09:387,27,0	1/1:1,19:20:54.18:774,54,0	1/1:0,16:16:45.11:621,45,0	1/1:1,11:12:36.11:498,36,0	1/1:4,12:16:33.03:472,33,0	1/1:2,4:5:9.03:129,9,0
chr10	62942953	.	GA	G	2247.39	PASS	AB=0.746;AC=27;AF=0.482;AN=56;BaseQRankSum=7.497;DP=494;FS=1.358;HRun=13;HaplotypeScore=87.9067;InbreedingCoeff=0.2501;MQ=70.66;MQ0=6;MQRankSum=-7.413;QD=8.32;ReadPosRankSum=0.465;VQSLOD=2.9847;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:47.30:0,47,609	0/1:5,1:6:9.42:9,0,72	0/0:46,0:20:11.44:0,11,118	0/1:21,1:9:14.21:14,0,62	0/0:20,2:23:10.45:0,10,383	0/1:8,5:13:9.76:94,0,10	1/1:2,15:21:34.51:254,35,0	0/0:26,2:31:30.31:0,30,371	0/1:13,2:15:4.48:4,0,212	1/1:1,11:12:32.50:229,32,0	0/1:5,5:10:36.03:69,0,36	0/1:7,6:13:19.96:156,0,20	0/1:1,5:6:14.25:73,0,14	0/1:5,5:10:14.28:73,0,14	1/1:11,8:21:13.62:245,14,0	1/1:2,11:14:34.78:245,35,0	0/0:24,1:25:9.41:0,9,428	0/0:26,0:27:62.61:0,63,559	0/1:14,5:20:2.34:148,0,2	1/1:5,3:8:10.74:71,11,0	0/1:17,5:20:32.58:106,0,33	0/0:7,0:7:15.02:0,15,144	0/0:9,1:11:26.82:0,27,227	0/0:21,0:21:51.52:0,52,484	1/1:4,9:14:9.07:184,9,0	1/1:5,17:22:43.61:299,44,0	0/1:8,6:14:6.10:115,0,6	1/1:4,0:4:8.63:50,9,0
chr10	62943167	.	T	TAGA	20835.47	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-13.730;DP=640;FS=3.157;HRun=0;HaplotypeScore=86.6489;InbreedingCoeff=0.9983;MQ=98.82;MQ0=0;MQRankSum=-6.953;QD=52.35;ReadPosRankSum=3.664;VQSLOD=7.1042;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:81.28:0,81,1346	0/0:6,0:6:18.05:0,18,275	0/0:40,0:40:92.90:0,93,1467	0/0:30,0:30:78.18:0,78,1220	0/0:28,0:28:75.16:0,75,1223	1/1:0,23:23:60.21:1359,60,0	1/1:4,16:21:36.12:815,36,0	0/0:24,0:23:69.23:0,69,1126	0/0:25,0:25:75.24:0,75,1215	1/1:0,18:18:54.12:1172,54,0	1/1:0,17:17:36.12:815,36,0	1/1:2,17:19:48.16:1086,48,0	1/1:2,13:15:39.13:881,39,0	1/1:0,11:12:27.09:611,27,0	1/1:1,24:25:63.22:1426,63,0	1/1:1,21:23:60.21:1358,60,0	0/0:39,0:39:99:0,117,1945	0/0:20,0:20:60.16:0,60,969	1/1:4,21:28:81.15:1591,81,0	1/1:0,18:19:57.16:1244,57,0	1/1:8,27:35:69.19:1491,69,0	1/1:0,17:17:42.14:950,42,0	1/1:0,24:26:56.96:1289,57,0	1/1:3,17:23:39.13:882,39,0	1/1:0,17:18:39.13:882,39,0	1/1:2,22:24:63.20:1357,63,0	1/1:5,17:23:45.15:1014,45,0	1/1:0,12:12:27.09:611,27,0
chr10	62943555	.	C	CT	6049.11	PASS	AB=0.563;AC=37;AF=0.661;AN=56;BaseQRankSum=-10.402;DP=507;FS=8.968;HRun=10;HaplotypeScore=57.3902;InbreedingCoeff=0.8221;MQ=59.32;MQ0=3;MQRankSum=3.514;QD=19.58;ReadPosRankSum=2.487;VQSLOD=5.5911;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,108,873	0/0:8,0:8:17.97:0,18,148	0/0:12,0:9:12.82:0,13,93	0/0:9,0:3:5.98:0,6,48	0/0:25,0:25:53.90:0,54,440	1/1:2,23:26:45.11:480,45,0	1/1:2,10:12:24.06:256,24,0	0/0:40,0:42:87.50:0,88,669	0/0:10,0:11:25.92:0,26,192	1/1:3,24:27:50.52:729,51,0	1/1:3,12:14:26.96:261,27,0	1/1:4,8:13:4.82:201,5,0	1/1:2,12:14:14.39:345,14,0	1/1:1,10:11:18.05:192,18,0	1/1:5,17:22:0.95:401,1,0	1/1:3,13:16:17.02:354,17,0	0/0:25,0:27:66.94:0,67,520	0/0:19,0:19:36.80:0,37,380	1/1:8,18:26:53.97:558,54,0	1/1:7,8:14:20.96:198,21,0	1/1:3,6:9:18.05:192,18,0	1/1:3,3:6:9.02:96,9,0	0/1:2,7:9:12.70:69,0,13	1/1:3,5:8:9.02:96,9,0	1/1:2,14:16:36.09:383,36,0	1/1:5,23:29:41.34:623,41,0	1/1:4,16:20:14.42:359,14,0	1/1:2,12:14:24.06:256,24,0
chr10	62945853	.	TGA	T	15930.70	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=13.801;DP=556;FS=1.897;HRun=0;HaplotypeScore=65.3315;InbreedingCoeff=0.9970;MQ=75.87;MQ0=3;MQRankSum=-3.416;QD=43.41;ReadPosRankSum=5.756;VQSLOD=6.1957;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:93.28:0,93,1795	0/0:7,0:7:21.06:0,21,374	0/0:10,0:10:30.10:0,30,586	0/0:13,0:13:39.12:0,39,698	0/0:25,0:25:75.23:0,75,1438	1/1:0,22:22:60.20:979,60,0	1/1:0,16:16:36.12:587,36,0	0/0:27,0:27:78.22:0,78,1409	0/0:22,0:22:66.21:0,66,1295	1/1:0,16:16:48.13:723,48,0	1/1:0,26:26:75.26:1223,75,0	1/1:0,14:14:39.13:636,39,0	1/1:0,16:16:42.14:685,42,0	1/1:0,17:17:42.14:685,42,0	1/1:0,23:23:54.18:881,54,0	1/1:0,20:20:54.18:881,54,0	0/0:28,0:28:84.29:0,84,1694	0/0:26,0:26:78.27:0,78,1548	1/1:0,17:17:48.16:774,48,0	1/1:0,26:26:72.25:1174,72,0	1/1:0,19:19:51.17:832,51,0	1/1:0,9:9:24.08:391,24,0	1/1:0,24:23:60.20:978,60,0	1/1:0,8:8:21.07:343,21,0	1/1:0,30:29:78.27:1272,78,0	1/1:0,25:25:75.26:1224,75,0	1/1:0,32:32:84.29:1370,84,0	1/1:0,7:6:18.06:294,18,0
chr10	62946540	.	TGGAGTGCAGTGTGAGTGGAGGA	T	541.53	PASS	AB=0.956;AC=11;AF=0.212;AN=52;BaseQRankSum=6.722;DP=665;FS=14.983;HRun=0;HaplotypeScore=284.3594;InbreedingCoeff=-0.2696;MQ=51.81;MQ0=111;MQRankSum=-4.380;QD=2.50;ReadPosRankSum=0.983;VQSLOD=1.1779;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:23:38.10:0,38,732	./.	0/0:36,0:17:32.31:0,32,431	0/0:44,0:27:32.01:0,32,605	0/1:15,6:16:3.14:3,0,181	0/0:8,0:4:12.03:0,12,223	0/0:34,0:29:57.06:0,57,1188	0/0:44,0:27:62.66:0,63,1049	0/1:30,0:22:43.21:43,0,243	0/0:17,0:14:39.10:0,39,825	0/0:2,0:2:2.96:0,3,19	0/1:24,0:18:53.78:54,0,527	0/1:28,0:16:45.01:45,0,239	0/0:30,0:24:48.87:0,49,662	0/1:26,0:16:52.31:52,0,146	0/0:22,0:14:26.79:0,27,320	0/1:27,0:26:46.78:47,0,1244	0/0:32,0:29:39.93:0,40,1533	0/1:21,12:23:99:338,0,619	0/1:5,0:5:21.86:22,0,132	0/0:86,0:77:99:0,157,3579	0/1:7,0:6:41.97:46,0,42	./.	0/0:36,0:31:14.35:0,14,1033	0/1:10,0:8:8.63:9,0,230	0/0:12,0:12:30.47:0,30,641	0/1:6,0:5:22.75:23,0,171	0/0:6,0:4:8.92:0,9,170
chr10	62948091	.	AGTAGTCAGT	A	3160.65	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=9.867;DP=633;FS=2.066;HRun=0;HaplotypeScore=170.8768;InbreedingCoeff=0.9907;MQ=94.60;MQ0=0;MQRankSum=-8.982;QD=45.81;ReadPosRankSum=0.160;VQSLOD=3.6542;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,108,4918	1/1:2,8:7:15.05:437,15,0	0/0:33,0:33:75.23:0,75,2920	0/0:28,0:28:75.26:0,75,3136	0/0:28,0:28:66.23:0,66,3009	0/0:24,0:24:51.18:0,51,2299	0/0:26,0:26:69.24:0,69,3149	1/1:9,16:25:48.15:1248,48,0	0/0:19,0:19:51.18:0,51,2342	0/0:16,0:16:45.15:0,45,1967	0/0:16,0:16:39.13:0,39,1768	0/0:25,0:25:63.22:0,63,2870	0/0:15,0:15:42.14:0,42,1873	0/0:23,0:23:63.22:0,63,2772	0/0:33,0:33:87.30:0,87,4101	0/0:29,0:29:78.27:0,78,3545	1/1:9,16:25:42.14:1195,42,0	1/1:2,7:9:15.05:437,15,0	0/0:21,0:21:36.11:0,36,1579	0/0:20,0:20:57.20:0,57,2551	0/0:48,0:48:99:0,114,5034	0/0:24,0:24:66.23:0,66,2998	0/0:15,0:15:39.13:0,39,1797	0/0:18,0:18:48.16:0,48,2209	0/0:11,0:11:27.09:0,27,1274	0/0:14,0:14:36.12:0,36,1699	0/0:17,0:17:39.13:0,39,1785	0/0:20,0:20:57.20:0,57,2598
chr10	62951478	.	CTCTTTCTTTCTTTCTTTCTTTCTT	C	13382.78	PASS	AB=0.970;AC=20;AF=0.385;AN=52;BaseQRankSum=-2.509;DP=599;FS=1.457;HRun=0;HaplotypeScore=323.0847;InbreedingCoeff=-0.0068;MQ=47.52;MQ0=20;MQRankSum=-6.496;QD=37.91;ReadPosRankSum=3.399;VQSLOD=3.0142;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:32:41.83:0,42,3467	0/0:10,0:10:21.07:0,21,1204	./.	./.	0/0:32,0:32:63.22:0,63,3664	0/1:10,0:9:17.77:427,0,18	1/1:19,0:11:12:297,12,0	0/0:35,0:21:21.07:0,21,704	0/0:17,0:19:36.59:0,37,1606	0/1:22,0:18:99:871,0,289	1/1:13,0:12:15.05:494,15,0	0/1:27,0:27:99:1556,0,287	0/1:23,0:18:99:879,0,152	0/1:27,0:22:99:987,0,291	0/1:37,0:33:99:2014,0,187	0/1:26,0:22:39.15:1599,0,39	0/0:19,0:19:45.15:0,45,2814	0/0:15,0:14:13.86:0,14,753	1/1:25,0:19:12.04:521,12,0	0/1:9,11:20:72.36:95,0,72	0/1:21,0:19:30.56:265,0,31	0/0:5,0:6:6.02:0,6,206	0/0:11,0:15:13.75:0,14,460	0/0:37,0:36:63.69:0,64,3418	0/1:22,0:21:99:673,0,370	0/1:27,0:24:99:1196,0,179	0/1:22,0:19:99:785,0,200	1/1:12,0:12:27.09:723,27,0
chr10	62951502	.	TTC	T	9029.37	PASS	AB=0.746;AC=26;AF=0.500;AN=52;BaseQRankSum=9.609;DP=562;FS=10.527;HRun=0;HaplotypeScore=188.9915;InbreedingCoeff=0.4015;MQ=37.85;MQ0=23;MQRankSum=-9.381;QD=25.01;ReadPosRankSum=-0.655;VQSLOD=4.6548;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:24:51.75:0,52,904	0/0:9,0:9:27.09:0,27,409	./.	./.	0/0:29,0:29:53.79:0,54,1161	0/1:9,5:13:29.64:152,0,30	0/1:16,2:11:88.76:89,0,115	0/0:33,0:13:36.12:0,36,537	0/0:26,0:24:23:0,23,375	0/1:13,13:19:5.44:654,0,5	0/1:5,6:8:9.05:232,0,9	1/1:14,14:27:33.63:1019,34,0	1/1:13,15:23:57.08:791,57,0	1/1:12,18:25:49.02:827,49,0	0/1:14,20:29:44.77:869,0,45	1/1:13,18:27:75.24:1067,75,0	0/0:18,0:18:48.16:0,48,806	0/0:14,0:13:27.98:0,28,423	1/1:5,3:7:11.94:154,12,0	1/1:20,2:21:33.08:440,33,0	0/1:9,4:11:41.19:121,0,41	0/1:12,0:11:2.64:3,0,134	0/0:14,0:13:15.48:0,15,201	0/0:33,0:31:17.15:0,17,482	1/1:12,12:21:2.71:545,3,0	0/1:10,15:22:55.99:748,0,56	1/1:11,14:21:60.19:834,60,0	1/1:6,6:12:33.11:485,33,0
chr10	62951505	.	T	TC	3914.97	PASS	AB=0.971;AC=24;AF=0.462;AN=52;BaseQRankSum=12.357;DP=556;FS=19.018;HRun=1;HaplotypeScore=199.5940;InbreedingCoeff=0.3284;MQ=37.20;MQ0=23;MQRankSum=-8.886;QD=11.58;ReadPosRankSum=-1.043;VQSLOD=0.3094;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:24:56.74:0,57,729	0/0:9,0:9:27.05:0,27,322	./.	./.	0/0:30,0:30:82.82:0,83,1022	0/1:13,0:12:26.77:27,0,139	0/1:18,0:11:59.01:59,0,103	0/0:35,0:15:36.11:0,36,489	0/0:26,0:24:62.04:0,62,586	0/1:23,0:17:34.94:249,0,35	0/1:12,0:9:20.63:101,0,21	1/1:26,3:28:31.95:542,32,0	1/1:27,1:23:52.19:357,52,0	1/1:26,2:23:6.34:291,6,0	0/1:29,4:28:56.69:334,0,57	1/1:29,1:26:67.01:467,67,0	0/0:19,0:19:51.13:0,51,635	0/0:14,0:13:27.96:0,28,348	0/1:7,0:6:14.94:50,0,15	1/1:22,0:21:29.65:210,30,0	0/1:10,1:9:32.69:33,0,103	0/0:12,0:11:25.69:0,26,245	0/0:15,0:13:21.53:0,22,228	0/0:33,0:31:67.11:0,67,709	1/1:19,3:19:0.33:278,0,0	0/1:25,1:23:91.10:276,0,91	1/1:24,0:20:54.24:374,54,0	1/1:12,0:12:32.81:267,33,0
chr10	62951506	.	TTC	T	4639.97	PASS	AB=0.942;AC=24;AF=0.462;AN=52;BaseQRankSum=14.039;DP=552;FS=3.515;HRun=0;HaplotypeScore=203.0791;InbreedingCoeff=-0.0078;MQ=36.96;MQ0=23;MQRankSum=-9.964;QD=12.05;ReadPosRankSum=-0.550;VQSLOD=4.5048;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:23:13.35:0,13,832	0/0:9,0:9:27.09:0,27,409	./.	./.	0/1:30,0:30:99:124,0,1004	0/1:13,0:12:67.97:224,0,68	0/0:16,2:11:0.75:0,1,143	0/0:36,0:16:42.07:0,42,577	0/1:26,0:24:32.63:33,0,108	0/1:20,3:17:58.20:221,0,58	0/1:11,1:9:55.33:81,0,55	1/1:22,7:28:9.75:437,10,0	1/1:18,10:23:51.43:545,51,0	0/1:22,6:23:5.27:449,0,5	0/1:29,4:28:96.67:304,0,97	1/1:20,10:26:64.44:615,64,0	0/0:19,0:19:51.17:0,51,844	0/0:13,0:12:27.98:0,28,426	0/1:7,0:6:23.12:23,0,47	1/1:14,8:21:29.59:393,30,0	0/1:11,0:9:32.67:33,0,158	0/1:13,0:12:19.16:45,0,19	0/0:15,0:13:1.66:0,2,144	0/0:33,0:31:3:0,3,410	0/1:20,2:19:19.75:225,0,20	0/1:21,4:22:99:218,0,163	1/1:14,10:20:53.45:532,53,0	1/1:7,2:9:19.80:138,20,0
chr10	62951510	.	TTC	T	1432.81	PASS	AB=0.967;AC=16;AF=0.308;AN=52;BaseQRankSum=5.334;DP=563;FS=0.000;HRun=0;HaplotypeScore=221.5323;InbreedingCoeff=-0.2964;MQ=36.24;MQ0=24;MQRankSum=-4.774;QD=4.15;ReadPosRankSum=-1.674;VQSLOD=1.9714;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,1:24:5.28:0,5,748	0/0:9,0:9:27.09:0,27,409	./.	./.	0/1:21,7:28:99:146,0,942	0/1:9,5:13:99:218,0,132	0/0:21,0:13:23.84:0,24,268	0/0:37,0:18:45.11:0,45,636	1/1:23,0:21:1.41:385,1,0	0/1:22,0:16:2.21:2,0,260	0/0:13,0:10:8.93:0,9,147	0/1:32,0:30:18.07:18,0,336	0/1:29,0:24:65.33:76,0,65	0/1:27,0:22:56.03:56,0,146	0/0:35,0:30:18.27:0,18,442	0/1:32,0:28:52.24:52,0,139	0/0:19,0:19:48.14:0,48,788	0/0:15,0:14:33.96:0,34,488	0/0:8,0:7:14.53:0,15,149	0/1:23,0:22:5.72:67,0,6	0/0:13,0:11:7.75:0,8,201	0/1:13,0:12:12.40:292,0,12	0/1:15,0:13:51.13:113,0,51	0/1:32,0:30:66.88:67,0,385	0/1:22,0:19:6.83:7,0,150	0/0:23,0:20:0.20:0,0,348	0/1:24,0:20:71.09:71,0,88	0/1:9,0:9:5.79:6,0,64
chr10	62951514	.	TTC	T	838.36	PASS	AB=0.853;AC=6;AF=0.115;AN=52;BaseQRankSum=-2.711;DP=545;FS=6.587;HRun=0;HaplotypeScore=223.3228;InbreedingCoeff=0.1285;MQ=35.70;MQ0=22;MQRankSum=0.252;QD=8.73;ReadPosRankSum=0.220;VQSLOD=2.6418;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:24:32.85:0,33,754	0/0:9,0:9:27.09:0,27,409	./.	./.	0/0:27,0:27:30.59:0,31,939	0/1:14,0:13:35.27:35,0,155	0/0:21,0:13:25.77:0,26,284	0/0:34,0:18:44.94:0,45,628	1/1:14,10:22:1.48:410,1,0	0/0:22,0:16:47.09:0,47,438	0/0:13,0:10:23.95:0,24,257	0/0:31,0:29:76.16:0,76,697	0/0:27,0:22:54.83:0,55,439	0/0:27,0:22:56.18:0,56,457	0/0:34,0:29:74.80:0,75,768	0/0:30,0:26:70.93:0,71,565	0/0:18,0:18:48.16:0,48,806	0/0:16,0:15:37.01:0,37,548	0/0:9,0:7:17.42:0,17,157	0/0:23,0:22:32.31:0,32,239	0/0:11,0:10:21.47:0,21,252	0/1:6,7:12:12.49:293,0,12	0/1:11,3:12:26.84:117,0,27	0/1:29,2:29:99:100,0,248	0/0:20,0:17:38.81:0,39,362	0/0:22,0:19:56.30:0,56,584	0/0:24,0:20:56.20:0,56,428	0/0:6,0:6:14.81:0,15,106
chr10	62951524	.	CTT	C	7753.39	PASS	AB=0.836;AC=28;AF=0.538;AN=52;BaseQRankSum=12.803;DP=559;FS=7.058;HRun=5;HaplotypeScore=192.9992;InbreedingCoeff=-0.1767;MQ=36.93;MQ0=22;MQRankSum=-7.482;QD=16.05;ReadPosRankSum=1.532;VQSLOD=1.1705;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:22:1.24:1,0,554	0/0:6,2:8:20.20:0,20,250	./.	./.	0/1:27,0:27:99:205,0,591	0/1:10,2:16:45.30:230,0,45	0/1:21,0:12:59.93:60,0,100	0/0:33,0:20:25.84:0,26,664	1/1:24,0:22:32.73:411,33,0	0/1:16,8:18:99:444,0,138	0/1:10,3:14:84.89:137,0,85	0/1:22,7:27:42.80:613,0,43	1/1:18,11:25:57.16:700,57,0	0/1:13,13:21:6.73:532,0,7	0/1:19,15:29:93.76:605,0,94	1/1:16,14:26:66.22:866,66,0	0/0:18,1:19:49.19:0,49,692	0/0:16,0:15:24.94:0,25,417	0/1:8,2:6:75.66:104,0,76	0/1:23,1:23:4.44:367,0,4	0/1:13,2:14:58.50:58,0,170	0/1:15,0:14:12.65:321,0,13	1/1:12,0:10:8.87:116,9,0	0/1:28,0:26:72.47:166,0,72	0/1:13,10:20:14.97:424,0,15	0/1:11,10:18:99:462,0,156	1/1:14,11:22:60.18:763,60,0	1/1:6,1:7:15.03:169,15,0
chr10	62951526	.	T	TCC	11328.75	PASS	AB=0.736;AC=27;AF=0.519;AN=52;BaseQRankSum=12.186;DP=575;FS=7.263;HRun=0;HaplotypeScore=183.0868;InbreedingCoeff=-0.2792;MQ=38.66;MQ0=22;MQRankSum=-10.292;QD=22.79;ReadPosRankSum=2.061;VQSLOD=5.0978;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:16,6:22:21.20:21,0,502	0/0:8,0:8:23.10:0,23,249	./.	./.	0/1:17,12:29:99:362,0,591	0/1:11,5:15:36.10:384,0,36	0/1:13,8:13:81.28:113,0,81	0/0:33,0:22:46.71:0,47,736	0/1:13,12:23:94.26:568,0,94	0/1:19,7:21:99:625,0,124	0/1:12,2:11:91.62:193,0,92	0/1:14,14:26:31.24:929,0,31	1/1:16,17:28:62.94:1070,63,0	1/1:17,11:24:30.81:829,31,0	0/1:18,14:27:86.27:760,0,86	1/1:17,13:28:69.23:1158,69,0	0/0:20,0:20:50.58:0,51,647	0/0:17,0:16:35.75:0,36,500	0/1:9,3:9:64.11:207,0,64	0/1:16,9:24:12:582,0,12	0/1:7,6:13:82.58:83,0,169	0/1:6,10:17:10:557,0,10	0/1:12,4:14:5.96:244,0,6	0/1:21,5:24:99:269,0,271	0/1:14,8:20:9.75:536,0,10	0/1:14,7:18:99:588,0,141	1/1:12,13:22:60.19:999,60,0	1/1:2,4:6:15.05:252,15,0
chr10	62951971	.	T	TCACAC	3657.63	PASS	AB=0.800;AC=22;AF=0.407;AN=54;BaseQRankSum=4.884;DP=571;FS=0.478;HRun=0;HaplotypeScore=191.4821;InbreedingCoeff=-0.2737;MQ=47.03;MQ0=19;MQRankSum=-4.695;QD=10.54;ReadPosRankSum=-2.414;VQSLOD=2.7508;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:14:9:142,9,0	0/1:5,0:7:39.60:40,0,179	0/0:47,0:14:18.31:0,18,440	0/0:66,0:21:50.85:0,51,624	./.	0/1:13,1:17:32.29:64,0,32	0/1:20,0:30:99:205,0,327	0/0:14,0:14:42.03:0,42,547	0/0:8,0:18:39.13:0,39,592	0/1:16,0:19:99:352,0,367	0/1:9,0:11:5.71:6,0,36	0/1:11,1:19:55.95:315,0,56	0/1:15,0:18:99:206,0,229	1/1:14,0:21:8.90:193,9,0	1/1:13,0:19:7.82:148,8,0	0/1:11,0:18:8.34:480,0,8	0/1:20,0:46:99:271,0,535	0/1:14,0:21:92.97:93,0,484	0/1:13,0:12:99:194,0,282	0/1:7,0:14:64.96:65,0,72	0/0:39,0:38:32.11:0,32,456	0/0:15,0:15:3.01:0,3,42	0/0:5,0:5:0.47:0,0,1	0/0:16,0:16:6.92:0,7,63	0/1:10,0:13:84.43:84,0,107	0/1:19,0:23:99:558,0,317	0/1:12,0:16:78.10:176,0,78	0/1:2,0:2:11.94:65,0,12
chr10	62952925	.	G	GA	5967.27	PASS	AB=0.644;AC=36;AF=0.643;AN=56;BaseQRankSum=-7.867;DP=498;FS=1.754;HRun=10;HaplotypeScore=56.7762;InbreedingCoeff=0.7574;MQ=76.23;MQ0=0;MQRankSum=-1.188;QD=18.53;ReadPosRankSum=0.434;VQSLOD=5.4343;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:98.78:0,99,801	0/0:6,0:6:17.98:0,18,148	0/0:15,0:15:13.04:0,13,163	0/0:12,0:12:6.33:0,6,115	0/0:15,0:16:43.96:0,44,348	1/1:6,18:24:51.13:544,51,0	1/1:5,16:22:12.35:366,12,0	0/0:26,0:26:50.81:0,51,405	0/0:14,0:14:26.93:0,27,218	1/1:5,21:26:60.10:615,60,0	0/1:6,5:11:6.60:142,0,7	1/1:1,6:8:14.91:143,15,0	1/1:1,10:11:24.06:256,24,0	1/1:5,13:18:33.04:340,33,0	0/1:3,6:9:0.64:187,0,1	1/1:4,12:16:5.43:264,5,0	0/0:23,0:22:68.91:0,69,564	0/0:22,0:22:56.84:0,57,455	1/1:4,10:14:8.39:272,8,0	1/1:5,8:13:2.38:191,2,0	1/1:4,21:25:48.12:512,48,0	1/1:3,8:11:14.90:202,15,0	1/1:2,5:7:3.01:32,3,0	1/1:9,16:25:30.13:403,30,0	1/1:2,11:14:29.91:301,30,0	1/1:5,22:27:2.95:500,3,0	1/1:4,15:23:22.82:384,23,0	1/1:5,11:18:14.11:315,14,0
chr10	62956796	.	GC	G	15756.47	PASS	AB=0.817;AC=54;AF=0.964;AN=56;BaseQRankSum=-3.518;DP=652;FS=11.828;HRun=5;HaplotypeScore=123.6734;InbreedingCoeff=-0.0414;MQ=72.51;MQ0=13;MQRankSum=-0.773;QD=24.17;ReadPosRankSum=2.856;VQSLOD=3.3386;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,26:28:63.11:697,63,0	1/1:1,9:10:27.08:306,27,0	0/1:39,14:26:99:329,0,108	0/1:47,10:24:23.75:225,0,24	1/1:6,19:24:63.18:714,63,0	1/1:4,14:18:51.11:557,51,0	1/1:5,14:19:51.10:564,51,0	1/1:0,17:17:51.13:564,51,0	1/1:2,15:17:42.11:466,42,0	1/1:4,15:19:53.82:584,54,0	1/1:4,18:22:66.19:744,66,0	1/1:5,16:21:63.13:697,63,0	1/1:8,10:16:36.10:407,36,0	1/1:0,13:13:39.11:442,39,0	1/1:7,29:36:99:1094,99,0	1/1:0,23:23:54.15:611,54,0	1/1:0,27:25:54.15:601,54,0	1/1:3,8:10:5.51:219,6,0	1/1:5,26:29:72.18:803,72,0	1/1:2,13:15:45.09:495,45,0	1/1:4,11:13:30.09:340,30,0	1/1:1,18:19:51.15:577,51,0	1/1:4,24:28:78.21:873,78,0	1/1:3,8:9:24.07:272,24,0	1/1:4,6:9:27.07:298,27,0	1/1:8,23:31:90.23:1001,90,0	1/1:13,21:33:87.23:974,87,0	1/1:0,15:15:27.08:304,27,0
chr10	62956820	.	G	GT	4754.16	PASS	AB=0.786;AC=51;AF=0.911;AN=56;BaseQRankSum=0.530;DP=631;FS=0.000;HRun=15;HaplotypeScore=146.4972;InbreedingCoeff=0.3584;MQ=41.42;MQ0=63;MQRankSum=-1.296;QD=8.90;ReadPosRankSum=1.762;VQSLOD=2.7667;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:24,7:26:28.95:189,0,29	1/1:5,1:9:14.42:84,14,0	0/0:49,0:7:0.34:0,0,1	0/0:47,0:10:2.04:0,2,9	1/1:17,9:25:32.17:227,32,0	1/1:19,0:19:37.95:226,38,0	1/1:17,0:16:20.49:124,20,0	1/1:27,2:29:29.63:166,30,0	1/1:16,0:16:7.20:37,7,0	1/1:17,0:16:40.77:235,41,0	1/1:21,0:21:44.16:277,44,0	1/1:16,0:16:35.08:214,35,0	1/1:14,0:12:25.39:147,25,0	1/1:17,0:14:26.33:159,26,0	1/1:30,0:29:67.58:402,68,0	1/1:18,0:16:35.19:215,35,0	1/1:23,2:22:23.58:165,24,0	1/1:14,1:17:1.02:39,1,0	1/1:33,0:25:34.58:187,35,0	1/1:17,0:16:38.21:238,38,0	1/1:17,0:10:5.90:38,6,0	1/1:19,0:19:44.34:287,44,0	1/1:27,0:24:52.89:331,53,0	1/1:16,0:11:26.35:161,26,0	1/1:12,0:8:17.44:105,17,0	1/1:21,0:19:45.27:245,45,0	1/1:22,0:21:35.07:211,35,0	1/1:10,0:7:8.58:45,9,0
chr10	62956827	.	T	TG	9095.49	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-1.191;DP=603;FS=7.239;HRun=0;HaplotypeScore=117.5215;InbreedingCoeff=0.9315;MQ=37.24;MQ0=76;MQRankSum=-2.131;QD=25.69;ReadPosRankSum=4.520;VQSLOD=5.4552;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:25:23.59:0,24,298	0/0:14,0:12:20.03:0,20,148	0/0:38,0:4:1.61:0,2,37	0/0:38,0:4:5.35:0,5,30	0/0:25,0:23:8.28:0,8,146	1/1:2,16:18:45.01:507,45,0	1/1:7,9:15:38.88:385,39,0	0/0:32,0:28:66.54:0,67,438	0/0:15,0:14:31.09:0,31,233	1/1:3,15:17:51.02:561,51,0	1/1:4,16:20:56.97:623,57,0	1/1:4,13:16:44.94:489,45,0	1/1:2,11:11:33.04:354,33,0	1/1:6,9:12:33.05:368,33,0	1/1:5,25:29:58.36:852,58,0	1/1:3,13:14:42.03:473,42,0	0/0:29,0:20:39.56:0,40,247	0/0:25,0:17:16.87:0,17,106	1/1:17,11:21:56.52:556,57,0	1/1:3,13:15:45.10:512,45,0	1/1:11,5:8:23.77:190,24,0	1/1:5,16:20:51.09:579,51,0	1/1:8,20:24:66.05:730,66,0	1/1:5,11:12:33:360,33,0	1/1:6,7:8:23.97:257,24,0	1/1:4,20:21:51.04:597,51,0	1/1:6,12:17:46.51:514,47,0	1/1:8,3:7:20.80:191,21,0
chr10	62956974	.	CT	C	4911.08	PASS	AB=0.657;AC=41;AF=0.732;AN=56;BaseQRankSum=5.817;DP=468;FS=5.940;HRun=12;HaplotypeScore=55.1531;InbreedingCoeff=0.3939;MQ=65.90;MQ0=0;MQRankSum=-1.223;QD=12.69;ReadPosRankSum=2.387;VQSLOD=4.8201;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,17:23:13.43:277,13,0	0/1:2,1:3:17.22:17,0,24	0/0:14,0:11:7.60:0,8,133	0/0:9,0:5:11.11:0,11,67	1/1:4,17:22:16.97:260,17,0	1/1:4,11:15:26.80:204,27,0	0/1:5,11:16:3.57:159,0,4	0/0:24,0:24:29.20:0,29,396	0/1:4,7:11:4.41:118,0,4	1/1:4,7:11:20.87:159,21,0	1/1:6,15:24:26.93:318,27,0	0/1:5,6:11:12.52:98,0,13	1/1:5,14:19:14.27:283,14,0	1/1:1,15:16:32.87:255,33,0	0/1:3,19:23:5.79:316,0,6	0/1:4,14:18:19.06:237,0,19	0/0:30,0:31:60.75:0,61,737	0/1:29,4:35:6.23:6,0,607	1/1:2,6:9:19.94:142,20,0	1/1:0,7:7:14.92:116,15,0	1/1:5,9:14:23.84:181,24,0	1/1:0,7:7:20.92:163,21,0	1/1:3,14:19:11.59:258,12,0	1/1:3,15:18:35.85:279,36,0	1/1:0,12:13:28.93:215,29,0	1/1:3,19:23:31.33:411,31,0	1/1:7,18:26:25.36:370,25,0	1/1:1,3:4:8.96:70,9,0
chr10	62958396	.	CCACACA	C	1496.72	PASS	AB=0.888;AC=29;AF=0.659;AN=44;BaseQRankSum=1.843;DP=587;FS=6.071;HRun=0;HaplotypeScore=116.6091;InbreedingCoeff=0.3873;MQ=64.72;MQ0=16;MQRankSum=-2.241;QD=4.29;ReadPosRankSum=-0.620;VQSLOD=1.6786;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:32:18.52:0,19,393	./.	./.	./.	0/0:9,0:10:9.03:0,9,149	1/1:16,0:15:5.95:66,6,0	1/1:20,0:19:3.01:59,3,0	0/0:22,0:21:2.97:0,3,20	1/1:10,0:16:11.78:167,12,0	0/0:19,0:19:0:0,0,0	1/1:9,0:12:3.01:42,3,0	0/1:22,5:25:25.45:128,0,25	1/1:8,3:11:2.74:56,3,0	./.	1/1:20,7:28:8.65:162,9,0	1/1:19,9:28:8.61:180,9,0	0/0:24,0:30:10.90:0,11,145	1/1:14,3:18:3.90:62,4,0	./.	1/1:13,4:17:11.99:155,12,0	1/1:37,4:41:3:60,3,0	0/0:15,0:17:2.99:0,3,25	1/1:11,0:11:3.89:60,4,0	0/1:33,1:36:0.75:1,0,67	0/1:18,1:18:7.77:54,0,8	1/1:18,5:23:9.01:180,9,0	1/1:16,2:19:12.90:205,13,0	./.
chr10	62958854	.	G	GA	1785.19	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-9.348;DP=680;FS=4.159;HRun=10;HaplotypeScore=95.5202;InbreedingCoeff=0.9189;MQ=68.29;MQ0=11;MQRankSum=-0.617;QD=20.06;ReadPosRankSum=0.694;VQSLOD=4.1234;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:40,1:41:69.81:0,70,770	1/1:2,7:10:23.89:238,24,0	0/0:34,0:16:4.60:0,5,174	0/0:24,0:9:5.88:0,6,94	0/0:41,1:43:68.41:0,68,760	0/0:25,0:25:61.93:0,62,498	0/0:23,0:24:64.96:0,65,523	1/1:5,20:25:59.05:596,59,0	0/0:17,0:17:35.92:0,36,292	0/0:30,0:30:71.17:0,71,588	0/0:25,0:25:52.04:0,52,565	0/0:33,0:33:35.29:0,35,548	0/0:15,0:15:38.21:0,38,300	0/0:14,2:16:9.96:0,10,288	0/0:27,0:27:68.83:0,69,561	0/0:26,0:27:67.92:0,68,544	1/1:3,23:25:42.11:448,42,0	1/1:4,24:27:61.16:662,61,0	0/0:22,1:23:18.92:0,19,361	0/0:17,1:20:17.96:0,18,339	0/0:16,0:16:44.93:0,45,366	0/0:28,0:28:65.89:0,66,541	0/0:16,0:17:37.96:0,38,297	0/0:20,0:20:47.94:0,48,394	0/0:21,0:21:50.21:0,50,415	0/0:25,0:25:62.88:0,63,510	0/0:21,0:21:44.92:0,45,368	0/0:14,0:15:28.06:0,28,271
chr10	62960875	.	ATG	A	22604.63	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=9.152;DP=1103;FS=6.217;HRun=0;HaplotypeScore=204.4335;InbreedingCoeff=0.9720;MQ=67.13;MQ0=14;MQRankSum=-1.292;QD=24.05;ReadPosRankSum=2.079;VQSLOD=5.0213;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:98.72:0,99,1612	1/1:6,14:20:36.08:432,36,0	0/0:40,0:30:38.49:0,38,573	0/0:49,0:33:26.40:0,26,377	0/0:23,1:24:20.02:0,20,821	1/1:8,12:20:39.12:483,39,0	1/1:8,27:35:63.07:778,63,0	1/1:15,28:40:78.23:942,78,0	1/1:8,39:47:84.22:1024,84,0	1/1:2,47:48:99:1525,127,0	1/1:4,20:24:36.11:446,36,0	1/1:4,43:46:84.26:1042,84,0	1/1:8,34:42:64.53:951,65,0	1/1:7,44:50:75.23:927,75,0	1/1:14,42:56:99:1782,144,0	1/1:6,43:49:90.28:1116,90,0	1/1:14,27:40:7.18:623,7,0	1/1:13,18:31:71.81:862,72,0	1/1:9,17:27:51.10:595,51,0	1/1:5,27:32:57.18:707,57,0	1/1:38,46:83:99:2226,185,0	1/1:5,30:35:60.16:744,60,0	1/1:3,22:25:16.54:697,17,0	1/1:21,33:54:99:1445,120,0	1/1:3,26:29:45.14:558,45,0	1/1:7,34:41:99:1181,99,0	1/1:3,33:34:69.11:853,69,0	1/1:1,21:22:54.17:667,54,0
chr10	62961078	.	AGT	A	2860.29	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=6.940;DP=1349;FS=1.879;HRun=0;HaplotypeScore=210.4153;InbreedingCoeff=0.9971;MQ=56.91;MQ0=61;MQRankSum=-0.795;QD=23.25;ReadPosRankSum=-3.090;VQSLOD=3.4582;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:57:99:0,148,2492	1/1:4,7:11:24.08:315,24,0	0/0:52,0:14:25.68:0,26,433	0/0:60,0:16:25.87:0,26,388	0/0:30,0:30:69.22:0,69,1132	0/0:22,0:22:53.20:0,53,844	0/0:42,0:42:99:0,114,1825	1/1:11,36:42:57.54:1036,58,0	0/0:70,0:70:99:0,195,3265	0/0:68,0:65:99:0,169,2785	0/0:32,0:32:78.25:0,78,1310	0/0:65,0:65:99:0,153,2486	0/0:54,0:53:99:0,141,2380	0/0:60,0:60:99:0,117,2473	0/0:83,0:84:99:0,202,3412	0/0:79,0:79:99:0,189,3139	1/1:4,24:27:19.96:597,20,0	1/1:9,28:34:84.55:1072,85,0	0/0:22,0:17:45.15:0,45,757	0/0:36,0:35:84.27:0,84,1386	0/0:148,0:147:99:0,366,6191	0/0:50,0:50:99:0,129,2147	0/0:27,0:27:78.25:0,78,1306	0/0:43,0:42:75.08:0,75,1248	0/0:15,0:15:36.11:0,36,590	0/0:54,0:54:99:0,157,2641	0/0:38,0:37:90.23:0,90,1508	0/0:15,0:15:36.12:0,36,602
chr10	62961138	.	AGT	A	26693.45	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=12.259;DP=1331;FS=16.651;HRun=0;HaplotypeScore=200.7908;InbreedingCoeff=0.9996;MQ=61.01;MQ0=24;MQRankSum=2.430;QD=28.49;ReadPosRankSum=6.222;VQSLOD=4.0926;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,141,2299	0/0:15,0:15:39.10:0,39,614	0/0:38,0:18:23.99:0,24,350	0/0:40,0:30:46.06:0,46,880	0/0:28,0:28:75.26:0,75,1277	1/1:2,27:28:63.20:828,63,0	1/1:6,39:45:93.29:1208,93,0	0/0:61,0:61:99:0,147,2387	0/0:74,0:74:99:0,193,3094	1/1:10,61:68:99:2090,171,0	1/1:5,32:36:75.24:986,75,0	1/1:8,72:78:99:2129,165,0	1/1:9,53:60:99:1636,126,0	1/1:5,61:66:99:1990,153,0	1/1:7,73:78:99:2266,175,0	1/1:4,61:64:99:1735,132,0	0/0:48,0:48:82.73:0,83,1831	0/0:37,0:37:76.66:0,77,1333	1/1:2,23:24:66.14:802,66,0	1/1:2,27:29:63.04:784,63,0	1/1:38,85:122:99:3833,301,0	1/1:2,34:36:93.30:1222,93,0	1/1:0,27:27:56.92:748,57,0	1/1:3,51:51:96.19:1242,96,0	1/1:3,15:18:30.08:378,30,0	1/1:4,39:41:78.12:1400,78,0	1/1:4,27:31:69.10:863,69,0	1/1:3,13:16:42.14:552,42,0
chr10	62961368	.	AGT	A	4695.10	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=13.187;DP=1423;FS=12.544;HRun=0;HaplotypeScore=191.0160;InbreedingCoeff=0.8934;MQ=55.50;MQ0=58;MQRankSum=0.233;QD=22.79;ReadPosRankSum=2.279;VQSLOD=4.7865;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:62,0:62:99:0,141,2411	0/0:7,0:7:18.06:0,18,309	0/0:56,0:8:18.04:0,18,241	0/1:59,0:8:1.61:2,0,83	0/0:26,0:26:72.23:0,72,1202	0/0:29,0:29:69.24:0,69,1167	0/0:42,0:42:99:0,108,1826	0/0:55,0:54:99:0,135,2159	0/0:60,0:60:99:0,178,3010	0/0:64,0:64:99:0,175,2843	0/0:36,0:36:99:0,99,1604	0/0:85,0:85:99:0,229,3830	0/0:63,0:63:99:0,176,2975	0/0:55,0:55:99:0,140,2320	0/0:64,0:64:99:0,180,2966	0/0:83,0:83:99:0,217,3610	0/0:45,0:44:99:0,117,1966	0/0:36,0:36:58.63:0,59,1321	0/0:32,0:24:53.76:0,54,844	0/0:43,0:42:99:0,108,1838	0/0:136,0:135:99:0,325,5389	1/1:11,41:51:99:1666,129,0	1/1:7,23:30:78.23:994,78,0	1/1:11,54:62:99:2034,156,0	0/0:38,0:38:99:0,102,1709	0/0:54,0:54:99:0,160,2684	0/0:30,0:30:78.27:0,78,1319	0/0:16,0:16:45.11:0,45,712
chr10	62961454	.	TG	T	4999.49	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=12.160;DP=1382;FS=9.799;HRun=1;HaplotypeScore=160.4871;InbreedingCoeff=0.9764;MQ=57.64;MQ0=20;MQRankSum=1.003;QD=37.03;ReadPosRankSum=0.157;VQSLOD=2.9472;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:69,0:69:99:0,163,2727	0/0:13,0:13:39.13:0,39,623	0/0:38,0:10:8.30:0,8,348	0/0:47,0:17:51.15:0,51,720	0/0:24,0:24:72.25:0,72,1145	0/0:26,0:26:75.24:0,75,1170	0/0:42,0:42:99:0,120,1829	0/0:56,0:56:99:0,166,2594	0/0:66,0:66:99:0,199,3102	0/0:69,0:69:99:0,205,3190	0/0:34,0:34:99:0,99,1562	0/0:79,0:78:99:0,235,3703	0/0:58,0:57:99:0,172,2666	0/0:42,0:42:99:0,123,1942	0/0:61,0:61:99:0,178,2805	0/0:81,0:81:99:0,238,3692	0/0:44,0:44:99:0,129,2010	0/0:33,0:33:93.30:0,93,1458	0/0:33,0:29:87.30:0,87,1372	0/0:43,1:44:99:0,126,1968	0/0:149,0:145:99:0,387,6061	1/1:1,38:39:99:1449,108,0	1/1:1,34:35:90.30:1251,90,0	1/1:3,58:61:99:2300,166,0	0/0:26,0:26:75.22:0,75,1126	0/0:56,0:56:99:0,169,2677	0/0:31,0:31:93.28:0,93,1428	0/0:25,0:24:72.24:0,72,1102
chr10	62961475	.	ATG	A	2260.67	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.280;DP=1379;FS=14.465;HRun=0;HaplotypeScore=198.0084;InbreedingCoeff=0.9095;MQ=56.20;MQ0=27;MQRankSum=1.772;QD=23.80;ReadPosRankSum=4.068;VQSLOD=3.2067;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:13,55:68:99:1593,102,0	0/0:13,0:13:36.12:0,36,593	0/0:40,0:5:15.03:0,15,214	0/0:38,0:5:3.01:0,3,51	1/1:1,26:26:60.20:789,60,0	0/0:23,0:23:63.22:0,63,1079	0/0:41,0:41:99:0,102,1691	0/0:63,0:62:99:0,141,2374	0/0:69,0:69:99:0,190,3129	0/0:75,0:75:99:0,190,3190	0/0:30,0:30:78.24:0,78,1266	0/0:83,0:82:99:0,223,3708	0/0:54,0:53:99:0,144,2381	0/0:55,0:55:99:0,160,2701	0/0:64,0:64:99:0,175,2929	0/0:75,0:75:99:0,196,3288	0/0:52,0:52:99:0,138,2306	0/0:33,1:34:78.55:0,79,1334	0/0:32,0:23:60.14:0,60,926	0/0:41,0:41:99:0,102,1722	0/0:141,0:136:99:0,331,5580	0/0:42,0:42:99:0,108,1802	0/0:32,0:32:77.94:0,78,1256	0/0:59,0:59:99:0,132,2179	0/0:22,0:22:47.88:0,48,808	0/0:60,0:60:99:0,157,2601	0/0:30,0:30:78.23:0,78,1269	0/0:16,0:16:48.16:0,48,818
chr10	62961852	.	GT	G	7317.58	PASS	AB=0.917;AC=39;AF=0.696;AN=56;BaseQRankSum=-2.574;DP=548;FS=17.276;HRun=10;HaplotypeScore=69.5026;InbreedingCoeff=0.9188;MQ=65.20;MQ0=4;MQRankSum=1.615;QD=19.62;ReadPosRankSum=5.470;VQSLOD=3.8935;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:24:36.72:0,37,181	0/0:6,0:6:18.05:0,18,199	0/0:23,0:18:41.20:0,41,331	0/1:20,1:12:7.60:8,0,108	0/0:6,0:36:79.22:0,79,436	1/1:0,13:13:26.99:234,27,0	1/1:1,5:6:12:104,12,0	0/0:33,1:32:49.07:0,49,726	0/0:4,0:18:33.98:0,34,183	1/1:2,23:25:68.97:595,69,0	1/1:2,15:17:44.96:385,45,0	1/1:4,18:22:50.98:443,51,0	1/1:2,12:14:41.99:363,42,0	1/1:2,12:14:35.99:312,36,0	1/1:3,13:16:41.98:364,42,0	1/1:3,17:20:14.81:357,15,0	0/0:22,0:22:57.11:0,57,604	0/0:12,0:12:36.10:0,36,398	1/1:3,13:16:38.97:339,39,0	1/1:2,30:32:49.83:649,50,0	1/1:3,12:15:29.99:260,30,0	1/1:2,12:14:35.99:312,36,0	1/1:6,12:18:29.95:260,30,0	1/1:1,16:17:35.99:313,36,0	1/1:2,14:16:38.99:339,39,0	1/1:2,26:28:74.97:651,75,0	1/1:2,24:26:65.81:573,66,0	1/1:4,18:22:24.89:458,25,0
chr10	62964680	.	A	AT	2503.13	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-8.927;DP=697;FS=5.581;HRun=7;HaplotypeScore=74.1037;InbreedingCoeff=0.9927;MQ=74.95;MQ0=0;MQRankSum=-2.960;QD=26.35;ReadPosRankSum=-0.971;VQSLOD=3.9901;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:84.10:0,84,804	1/1:1,9:10:21.06:254,21,0	0/0:20,0:21:30.88:0,31,419	0/0:17,0:17:23.18:0,23,285	0/0:24,0:24:69.11:0,69,666	0/0:25,0:25:72.07:0,72,685	0/0:18,0:18:45.06:0,45,434	1/1:6,22:28:14.24:718,14,0	0/0:21,0:21:60.09:0,60,579	0/0:30,0:30:78.12:0,78,753	0/0:26,0:26:72.11:0,72,695	0/0:22,0:22:48.07:0,48,459	0/0:17,0:17:41.94:0,42,405	0/0:29,0:29:87.13:0,87,834	0/0:31,0:31:84.11:0,84,805	0/0:25,0:25:72.11:0,72,695	1/1:1,25:29:77.70:856,78,0	1/1:1,27:28:69.68:834,70,0	0/0:20,0:20:57.07:0,57,543	0/0:27,0:28:68.11:0,68,637	0/0:26,0:26:69.09:0,69,661	0/0:23,0:23:69.11:0,69,666	0/0:35,0:35:96.15:0,96,926	0/0:26,0:26:72.11:0,72,695	0/0:30,0:30:75.11:0,75,724	0/0:25,0:25:51.07:0,51,492	0/0:30,0:30:87.11:0,87,833	0/0:18,0:18:45.95:0,46,437
chr10	62964771	.	CTTT	C	4041.98	PASS	AB=0.783;AC=34;AF=0.607;AN=56;BaseQRankSum=-2.402;DP=622;FS=0.423;HRun=17;HaplotypeScore=109.3906;InbreedingCoeff=0.6672;MQ=50.46;MQ0=30;MQRankSum=-1.448;QD=9.74;ReadPosRankSum=3.995;VQSLOD=0.2621;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:22:46.61:0,47,600	0/1:4,1:7:33.31:33,0,80	0/1:32,0:3:0.02:0,0,0	0/0:25,0:12:10.79:0,11,60	0/0:26,0:25:62.76:0,63,747	1/1:9,12:22:5.31:238,5,0	1/1:9,2:12:11.79:75,12,0	0/0:15,1:28:17.78:0,18,350	0/0:17,0:17:30.98:0,31,469	1/1:10,8:18:22.20:220,22,0	1/1:8,12:21:34.94:302,35,0	1/1:7,13:22:4.93:198,5,0	1/1:7,7:15:9.16:101,9,0	1/1:13,10:24:16.26:378,16,0	1/1:4,19:25:37.06:354,37,0	1/1:8,11:21:25.47:273,25,0	0/0:13,0:19:13.75:0,14,257	0/1:26,1:28:7.19:7,0,342	1/1:15,7:18:2.33:152,2,0	1/1:14,17:35:54.66:527,55,0	1/1:10,6:14:14.68:140,15,0	0/0:13,0:21:37.92:0,38,325	0/0:18,1:25:5.44:0,5,215	0/0:7,0:16:17.90:0,18,145	1/1:12,13:29:38.67:378,39,0	0/1:7,9:20:7.31:260,0,7	1/1:6,13:20:23.38:239,23,0	1/1:7,5:10:16.47:168,16,0
chr10	62964785	.	TTTTG	T	172.01	PASS	AB=0.981;AC=14;AF=0.250;AN=56;BaseQRankSum=4.884;DP=605;FS=18.053;HRun=0;HaplotypeScore=133.2310;InbreedingCoeff=-0.2211;MQ=43.46;MQ0=43;MQRankSum=-1.479;QD=0.60;ReadPosRankSum=0.852;VQSLOD=1.6486;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:24:61.66:0,62,859	0/0:9,0:9:6.76:0,7,221	1/1:24,0:3:0.45:1,0,0	0/0:16,0:7:1.27:0,1,39	0/0:32,0:30:80.44:0,80,1161	0/0:21,0:20:18.83:0,19,159	0/0:12,0:11:11.32:0,11,128	0/0:27,0:27:74.03:0,74,931	0/0:17,0:14:41.97:0,42,679	0/0:15,0:12:22.82:0,23,140	0/1:22,0:21:9.10:9,0,120	0/1:23,0:23:15.73:16,0,116	0/1:18,0:17:19.10:19,0,149	0/1:28,1:29:41.04:41,0,233	0/1:27,0:26:44.82:45,0,63	0/1:22,2:22:36.67:37,0,177	0/0:23,0:20:35.32:0,35,583	0/0:32,0:26:50.54:0,51,614	0/1:20,1:17:3.62:4,0,138	0/1:27,1:28:37.11:37,0,131	0/1:16,0:12:4.46:4,0,64	0/0:23,0:23:65.27:0,65,722	0/0:21,0:21:34.20:0,34,490	0/0:18,0:15:26.86:0,27,297	0/0:22,0:22:8.03:0,8,100	0/1:18,0:18:63.25:63,0,77	0/1:22,1:21:32.54:33,0,94	0/1:16,0:11:1.67:2,0,74
chr10	62965519	.	G	GTGGTTTGCTT	16494.90	PASS	AB=1.000;AC=45;AF=0.804;AN=56;BaseQRankSum=-7.204;DP=617;FS=20.786;HRun=0;HaplotypeScore=180.5007;InbreedingCoeff=0.1973;MQ=74.09;MQ0=3;MQRankSum=-5.546;QD=30.83;ReadPosRankSum=0.914;VQSLOD=3.2259;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:34,0:34:99:183,0,821	0/1:5,0:5:38:38,0,72	0/0:46,0:32:74.60:0,75,727	0/0:35,0:21:28.28:0,28,301	0/1:29,0:29:99:238,0,657	1/1:17,2:20:50.96:1475,51,0	1/1:19,0:18:44.76:652,45,0	0/1:30,0:30:98.90:396,0,99	0/1:13,0:13:99:108,0,245	1/1:19,1:20:54.12:1416,54,0	1/1:13,0:13:29.89:553,30,0	1/1:21,0:21:56.82:1155,57,0	1/1:13,0:13:29.79:379,30,0	1/1:5,16:21:12.04:532,12,0	1/1:7,15:23:12.01:370,12,0	1/1:8,15:23:27.06:969,27,0	0/1:28,0:28:99:165,0,781	0/1:19,0:19:99:232,0,229	1/1:6,15:22:53.90:822,54,0	1/1:8,12:20:38.44:689,38,0	1/1:21,0:21:44.77:432,45,0	1/1:21,0:20:56.82:709,57,0	1/1:18,0:19:50.83:688,51,0	1/1:19,0:19:50.76:773,51,0	1/1:8,11:20:12:438,12,0	1/1:26,0:26:71.97:1415,72,0	1/1:15,0:17:50.88:1117,51,0	1/1:17,0:17:47.76:553,48,0
chr10	62965522	.	G	GTTTGC	10427.78	PASS	AB=1.000;AC=44;AF=0.786;AN=56;BaseQRankSum=-4.180;DP=627;FS=24.189;HRun=0;HaplotypeScore=154.6335;InbreedingCoeff=0.1234;MQ=72.71;MQ0=5;MQRankSum=-5.961;QD=19.42;ReadPosRankSum=2.583;VQSLOD=2.9210;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:34,0:34:99:180,0,433	0/1:5,0:5:35.02:35,0,59	0/0:48,0:33:80.32:0,80,758	0/0:40,0:22:28.69:0,29,310	0/1:30,0:30:99:236,0,315	1/1:17,1:18:47.95:808,48,0	1/1:21,0:20:1.72:374,2,0	0/1:32,0:31:88.98:390,0,89	0/1:12,0:12:99:108,0,113	1/1:22,0:22:27.94:835,28,0	1/1:12,0:12:29.56:265,30,0	1/1:20,1:21:56.82:723,57,0	1/1:12,0:12:29.75:246,30,0	0/1:21,0:21:9.39:203,0,9	1/1:21,0:21:9.49:176,9,0	1/1:22,0:22:24.87:415,25,0	0/1:27,0:27:99:165,0,365	0/1:19,0:19:99:229,0,109	1/1:23,0:22:28.90:528,29,0	1/1:20,1:20:30.49:260,30,0	1/1:18,0:18:47.76:434,48,0	1/1:23,0:22:31.54:507,32,0	1/1:22,0:21:26.46:529,26,0	1/1:19,0:19:46.80:540,47,0	1/1:19,0:19:9.50:184,10,0	1/1:27,1:28:23.83:934,24,0	1/1:17,1:18:29.93:630,30,0	1/1:17,0:17:47.76:493,48,0
chr10	62965561	.	C	CT	1857.07	PASS	AB=0.915;AC=33;AF=0.589;AN=56;BaseQRankSum=2.194;DP=704;FS=1.991;HRun=17;HaplotypeScore=131.0173;InbreedingCoeff=-0.1113;MQ=45.17;MQ0=31;MQRankSum=-4.770;QD=2.94;ReadPosRankSum=-1.200;VQSLOD=0.1528;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:38,5:45:11.09:266,11,0	0/1:8,1:11:1.34:1,0,66	0/1:58,0:19:1.26:1,0,4	0/1:77,0:20:13.34:13,0,16	1/1:19,12:31:8.93:153,9,0	0/1:24,4:26:12.21:125,0,12	0/1:19,1:20:3.68:105,0,4	0/1:28,1:27:11.51:12,0,94	0/1:21,0:23:6.69:7,0,70	1/1:17,9:26:15.05:198,15,0	1/1:13,2:17:11.29:134,11,0	1/1:19,3:21:14.96:142,15,0	0/1:9,0:7:12:12,0,16	1/1:15,1:17:4.71:89,5,0	0/1:17,0:17:36.62:37,0,40	0/1:17,5:21:1.73:141,0,2	0/0:37,2:39:19.92:0,20,227	0/0:16,0:15:9.73:0,10,48	0/1:20,4:24:44.37:131,0,44	0/1:14,5:19:1.65:110,0,2	1/1:4,0:4:2.99:23,3,0	0/1:15,0:14:15.45:15,0,28	0/1:25,1:26:15.53:16,0,82	0/0:17,0:14:15.97:0,16,82	0/1:17,2:20:27.59:43,0,28	1/1:17,13:31:9.06:175,9,0	0/1:18,2:19:24.93:50,0,25	0/1:5,2:7:0.57:18,0,1
chr10	62965847	.	C	CTTGT	9821.86	PASS	AB=0.745;AC=29;AF=0.518;AN=56;BaseQRankSum=-7.615;DP=728;FS=4.785;HRun=0;HaplotypeScore=122.4493;InbreedingCoeff=0.7320;MQ=70.75;MQ0=6;MQRankSum=0.081;QD=24.43;ReadPosRankSum=-1.216;VQSLOD=4.0859;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:56:69.17:0,69,981	0/0:12,0:12:27.09:0,27,418	0/0:29,0:27:12.03:0,12,157	0/0:26,0:24:18.04:0,18,222	0/0:29,0:29:33.10:0,33,500	1/1:9,14:22:27.09:642,27,0	1/1:14,15:30:27.12:634,27,0	0/0:36,0:36:18.04:0,18,224	0/0:26,0:26:51.13:0,51,738	0/1:17,3:23:23.42:377,0,23	1/1:8,8:15:18.06:395,18,0	1/1:15,12:29:30.10:709,30,0	1/1:13,8:23:24.08:560,24,0	1/1:14,7:26:33.11:764,33,0	1/1:13,14:28:33.11:782,33,0	0/1:22,16:37:4.45:884,0,4	0/0:26,0:26:20.51:0,21,614	0/0:30,0:29:45.10:0,45,662	1/1:17,2:19:6.02:142,6,0	1/1:13,5:20:23.99:398,24,0	0/1:22,12:33:16.91:613,0,17	0/0:11,0:11:6.02:0,6,95	0/0:13,0:13:12.03:0,12,167	0/0:32,0:32:60.17:0,60,880	1/1:15,3:20:9.03:213,9,0	1/1:14,17:31:57.19:1347,57,0	1/1:14,17:30:4.17:1089,4,0	1/1:7,3:9:12.04:273,12,0
chr10	62966552	.	G	GT	8984.08	PASS	AB=0.741;AC=37;AF=0.661;AN=56;BaseQRankSum=-7.624;DP=724;FS=0.711;HRun=10;HaplotypeScore=87.8295;InbreedingCoeff=0.7694;MQ=62.43;MQ0=13;MQRankSum=0.895;QD=18.60;ReadPosRankSum=1.413;VQSLOD=5.4498;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:46:89.99:0,90,680	0/0:6,0:6:17.98:0,18,148	0/0:52,0:21:7.45:0,7,118	0/1:62,0:18:0.25:0,0,22	0/0:30,1:32:13.22:0,13,367	1/1:1,20:22:32.33:532,32,0	1/1:7,16:23:1.95:431,2,0	0/0:31,1:31:64.12:0,64,536	0/0:11,0:11:23.71:0,24,184	1/1:4,23:28:71.95:726,72,0	1/1:2,14:16:44.62:428,45,0	1/1:5,10:16:39.08:406,39,0	1/1:2,18:20:41.97:430,42,0	1/1:3,15:18:30.08:319,30,0	1/1:3,23:25:60.15:640,60,0	1/1:5,24:30:65.67:665,66,0	0/0:26,0:28:75.96:0,76,599	0/0:33,0:34:85.37:0,85,670	0/1:13,13:29:6.14:480,0,6	1/1:4,24:28:66.13:691,66,0	1/1:4,10:14:32.92:334,33,0	1/1:24,0:24:58.84:369,59,0	1/1:14,0:14:41.12:248,41,0	1/1:19,0:19:49.94:303,50,0	0/1:6,15:22:44.04:376,0,44	1/1:5,25:30:50.54:742,51,0	1/1:2,23:25:50.93:544,51,0	1/1:0,12:12:30.08:320,30,0
chr10	62966559	.	T	TG	2674.97	PASS	AB=0.998;AC=23;AF=0.411;AN=56;BaseQRankSum=5.411;DP=723;FS=0.000;HRun=0;HaplotypeScore=107.4481;InbreedingCoeff=-0.1994;MQ=59.99;MQ0=16;MQRankSum=1.297;QD=5.79;ReadPosRankSum=6.536;VQSLOD=3.2022;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:48:68.83:0,69,907	0/0:6,0:6:18.06:0,18,251	0/0:45,0:16:26.93:0,27,254	0/0:60,0:16:21.32:0,21,143	0/1:35,0:36:34.86:35,0,558	0/1:23,0:23:43.38:43,0,44	0/1:19,0:19:34.50:34,0,73	0/0:29,0:28:78.19:0,78,1019	0/0:11,0:10:30.08:0,30,379	0/1:27,0:26:12.87:53,0,13	0/1:19,0:18:36.92:37,0,45	0/1:20,0:20:35.32:35,0,136	0/1:24,0:23:39.22:39,0,61	0/1:18,0:18:30.14:30,0,50	0/1:26,0:25:35.16:49,0,35	0/1:27,0:27:16.68:51,0,17	0/0:28,0:28:84.11:0,84,1088	0/0:34,0:34:99:0,99,1268	0/1:26,0:26:16.49:16,0,215	0/1:27,0:27:55.73:66,0,56	0/1:14,0:13:19.96:26,0,20	1/1:0,23:23:66.02:865,66,0	1/1:0,16:16:42.14:585,42,0	1/1:0,25:25:51.17:711,51,0	0/1:22,0:22:11.56:12,0,199	0/1:31,0:31:74.65:75,0,104	0/1:26,0:26:29.20:47,0,29	0/1:13,0:13:0.13:41,0,0
chr10	62967401	.	A	AC	7030.65	PASS	AB=0.650;AC=36;AF=0.692;AN=52;BaseQRankSum=-4.822;DP=398;FS=144.714;HRun=2;HaplotypeScore=96.7487;InbreedingCoeff=-0.4718;MQ=31.89;MQ0=50;MQRankSum=1.819;QD=19.31;ReadPosRankSum=-0.060;VQSLOD=0.4313;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,18:20:7.57:566,8,0	0/1:2,5:6:22.08:157,0,22	./.	./.	1/1:4,6:8:11.78:172,12,0	0/1:6,17:17:63.23:512,0,63	1/1:5,11:11:18.02:235,18,0	0/1:11,10:10:84.49:185,0,84	1/1:8,4:6:9.03:129,9,0	0/1:7,10:11:78.01:294,0,78	0/1:11,10:15:10.08:318,0,10	1/1:3,5:6:12.04:172,12,0	1/1:3,12:13:1.99:480,2,0	0/1:7,9:13:38.17:374,0,38	0/1:8,7:12:53.20:189,0,53	1/1:2,7:8:21.07:301,21,0	0/1:9,9:12:85.56:191,0,86	0/1:7,5:9:53.23:195,0,53	0/1:10,5:15:99:188,0,122	0/1:3,9:10:44.17:315,0,44	1/1:1,6:6:12.04:173,12,0	1/1:2,9:9:24.08:345,24,0	1/1:7,4:9:21.04:265,21,0	0/1:6,6:10:25.23:117,0,25	0/1:8,5:13:99:180,0,224	0/1:7,17:22:99:564,0,162	0/1:4,7:11:10.03:314,0,10	0/1:2,2:4:25.12:99,0,25
chr10	62967414	.	CT	C	1495.58	PASS	AB=0.635;AC=47;AF=0.904;AN=52;BaseQRankSum=2.401;DP=349;FS=0.000;HRun=2;HaplotypeScore=90.2714;InbreedingCoeff=-0.0389;MQ=24.88;MQ0=93;MQRankSum=-2.061;QD=5.07;ReadPosRankSum=0.500;VQSLOD=0.3949;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,14:12:16.46:87,16,0	1/1:1,7:6:10.93:38,11,0	./.	./.	1/1:1,6:6:5.84:18,6,0	1/1:0,15:9:20.93:70,21,0	1/1:2,13:7:6.29:19,6,0	1/1:2,14:7:19.77:96,20,0	1/1:1,8:6:7.08:39,7,0	0/1:5,13:10:0.43:88,0,0	1/1:1,14:10:10.11:29,10,0	1/1:1,7:6:9.45:49,9,0	1/1:1,16:12:26.04:100,26,0	1/1:3,11:10:22.46:111,22,0	1/1:3,10:8:10.70:33,11,0	1/1:1,6:5:11.26:37,11,0	0/1:8,6:7:4.76:5,0,86	0/1:7,5:8:50.56:68,0,51	0/1:1,10:10:19.46:108,0,19	1/1:1,12:10:18.03:97,18,0	0/1:3,3:5:14.99:15,0,23	1/1:1,5:4:8.01:25,8,0	1/1:3,3:3:3.32:22,3,0	1/1:4,5:6:7.18:43,7,0	1/1:0,10:10:20.99:71,21,0	1/1:1,17:15:42.47:245,42,0	1/1:1,7:7:11.36:58,11,0	1/1:0,4:4:10.60:43,11,0
chr10	62967417	.	A	AG	2554.96	PASS	AB=0.676;AC=48;AF=0.923;AN=52;BaseQRankSum=1.836;DP=386;FS=1.549;HRun=0;HaplotypeScore=92.3977;InbreedingCoeff=-0.0513;MQ=24.40;MQ0=105;MQRankSum=-1.657;QD=7.70;ReadPosRankSum=-0.726;VQSLOD=3.5250;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,14:15:19.57:129,20,0	1/1:2,7:6:13.91:67,14,0	./.	./.	1/1:0,6:5:8.67:48,9,0	1/1:1,15:10:25.57:128,26,0	1/1:3,13:8:11.30:72,11,0	1/1:7,14:10:29.70:220,30,0	1/1:3,8:7:8.50:57,8,0	1/1:7,13:12:14.86:206,15,0	1/1:1,14:10:16.01:69,16,0	1/1:2,7:7:11.33:73,11,0	1/1:3,16:12:33.35:171,33,0	1/1:3,11:10:25.01:145,25,0	1/1:5,10:8:15.94:68,16,0	1/1:2,6:5:14.03:67,14,0	0/1:9,6:8:15.29:15,0,72	0/1:10,4:9:66.04:69,0,66	0/1:2,10:11:9.27:188,0,9	1/1:4,12:11:25.31:145,25,0	0/1:3,3:5:0.17:22,0,0	1/1:3,5:6:10.92:49,11,0	1/1:2,3:2:5.17:20,5,0	1/1:6,5:7:2.50:9,2,0	1/1:2,10:11:25.46:125,25,0	1/1:2,17:16:44.46:335,44,0	1/1:1,7:7:17.85:99,18,0	1/1:4,4:5:11.67:67,12,0
chr10	62967576	.	A	AAAGG	2950.86	PASS	AB=1.000;AC=28;AF=0.500;AN=56;BaseQRankSum=3.138;DP=465;FS=11.902;HRun=0;HaplotypeScore=136.9454;InbreedingCoeff=-0.1436;MQ=53.55;MQ0=2;MQRankSum=2.416;QD=8.43;ReadPosRankSum=2.638;VQSLOD=2.4167;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:30.57:0,31,508	0/1:14,0:14:44.65:161,0,45	1/1:15,0:2:2.04:6,2,0	0/0:7,0:3:2.98:0,3,22	0/0:22,0:22:50.83:0,51,633	0/1:16,0:16:35.23:146,0,35	0/1:11,0:11:22.71:47,0,23	0/0:31,0:26:47.31:0,47,401	0/0:11,0:11:33.04:0,33,465	1/1:12,0:12:23.48:145,23,0	0/1:14,0:14:12.63:81,0,13	0/1:21,0:21:13.97:14,0,46	0/1:15,0:14:15.48:54,0,15	0/1:12,0:12:19.03:61,0,19	0/1:14,0:14:33.33:64,0,33	0/1:23,0:23:17.64:154,0,18	0/1:28,0:28:99:441,0,162	0/0:17,0:17:24.86:0,25,161	0/1:13,0:13:9.52:93,0,10	0/1:20,0:20:34.16:132,0,34	1/1:5,0:5:5.12:41,5,0	1/1:0,13:13:26.98:548,27,0	1/1:1,10:11:15.52:308,16,0	1/1:1,8:9:9.03:240,9,0	0/1:19,0:19:2.78:121,0,3	0/1:20,0:20:1.01:101,0,1	0/1:26,0:26:33.61:60,0,34	0/1:19,0:19:38.06:105,0,38
chr10	62967588	.	AAAGG	A	3076.46	PASS	AB=1.000;AC=25;AF=0.446;AN=56;BaseQRankSum=-13.490;DP=493;FS=0.000;HRun=0;HaplotypeScore=146.7556;InbreedingCoeff=-0.5312;MQ=55.80;MQ0=1;MQRankSum=-1.355;QD=7.04;ReadPosRankSum=-11.236;VQSLOD=-0.1512;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:2,24:26:27.09:467,27,0	0/1:14,0:14:21.47:21,0,139	0/0:22,0:11:12.52:0,13,180	0/0:8,0:5:12.47:0,12,126	1/1:3,18:21:47.63:560,48,0	0/1:17,0:17:54.86:55,0,291	0/1:13,0:13:99:106,0,154	0/1:30,0:27:19.54:330,0,20	0/0:11,0:11:33.07:0,33,613	0/1:14,0:14:43.02:43,0,141	0/1:15,0:15:43.88:44,0,279	0/1:25,0:25:99:224,0,274	0/1:15,0:14:99:104,0,111	0/1:15,0:15:99:115,0,147	0/1:15,0:15:44.42:44,0,242	0/1:21,0:21:99:106,0,248	0/1:26,0:26:99:143,0,333	0/1:19,0:19:79.16:200,0,79	0/1:16,0:16:45.66:151,0,46	0/1:20,0:20:45.30:45,0,307	0/0:5,0:5:10.26:0,10,90	0/1:19,0:19:99:122,0,165	0/0:10,0:10:10.35:0,10,87	0/1:11,0:11:48.93:49,0,78	0/1:19,0:19:99:122,0,225	0/1:22,0:22:99:127,0,217	0/1:24,0:24:50.01:50,0,446	0/1:20,0:20:14.92:15,0,360
chr10	62969329	.	T	TGA	2530.01	PASS	AB=0.917;AC=54;AF=0.964;AN=56;BaseQRankSum=1.586;DP=249;FS=10.654;HRun=0;HaplotypeScore=300.8177;InbreedingCoeff=0.0840;MQ=33.18;MQ0=0;MQRankSum=-1.732;QD=10.16;ReadPosRankSum=1.185;VQSLOD=2.1923;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:18,1:19:8.95:70,9,0	1/1:3,0:3:5.99:51,6,0	1/1:1,0:1:3.01:36,3,0	0/1:4,0:4:16.74:39,0,17	1/1:10,0:10:6.01:77,6,0	1/1:15,0:15:16.56:158,17,0	1/1:10,0:10:21.01:198,21,0	1/1:11,0:11:27.49:274,27,0	1/1:7,0:7:5.99:60,6,0	1/1:14,1:15:20.99:188,21,0	1/1:6,0:6:9.01:87,9,0	1/1:9,0:9:8.99:77,9,0	1/1:12,0:12:14.23:125,14,0	1/1:6,0:6:9.01:104,9,0	1/1:10,0:10:6.01:63,6,0	1/1:5,0:5:9:80,9,0	1/1:8,0:8:12.02:139,12,0	1/1:9,0:9:15.02:141,15,0	1/1:5,1:6:9.01:104,9,0	1/1:9,0:9:12.01:137,12,0	0/1:7,0:7:0:0,0,0	1/1:10,0:10:2.04:6,2,0	1/1:5,0:5:2.99:23,3,0	1/1:15,1:16:8.52:72,9,0	1/1:7,0:7:4.25:37,4,0	1/1:14,0:14:18.49:174,18,0	1/1:9,0:9:2.60:10,3,0	1/1:5,0:5:9:90,9,0
chr10	62972021	.	T	TG	759.16	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=0.163;DP=545;FS=16.684;HRun=8;HaplotypeScore=74.3692;InbreedingCoeff=0.8894;MQ=78.79;MQ0=0;MQRankSum=-1.791;QD=14.06;ReadPosRankSum=0.107;VQSLOD=1.9341;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:53.43:0,53,459	0/0:8,0:8:20.75:0,21,176	0/0:21,0:19:2.42:0,2,256	0/0:19,0:17:17.03:0,17,135	0/0:19,0:20:56:0,56,483	0/0:17,0:17:41.05:0,41,361	0/0:32,0:32:83.99:0,84,757	0/0:15,0:15:19.57:0,20,218	0/0:21,0:21:50.64:0,51,473	0/0:17,0:17:42.01:0,42,380	0/0:15,0:15:20.23:0,20,265	0/0:19,0:20:53.92:0,54,474	0/0:26,0:27:77.01:0,77,672	0/0:17,0:17:19.39:0,19,303	0/0:28,0:28:58.38:0,58,546	0/0:33,0:33:84.78:0,85,744	0/0:25,0:25:52.37:0,52,485	0/0:13,0:13:30:0,30,272	0/0:15,0:15:35.94:0,36,315	0/0:12,0:12:23.05:0,23,198	0/0:33,0:33:70.40:0,70,618	1/1:3,14:17:24.07:276,24,0	1/1:2,11:13:20.91:241,21,0	1/1:3,21:24:33.98:383,34,0	0/0:10,0:11:26.49:0,26,235	0/0:23,0:23:51.02:0,51,466	0/0:21,0:21:58.62:0,59,479	0/0:3,0:3:5.98:0,6,50
chr10	62972991	.	CA	C	1230.62	PASS	AB=0.783;AC=26;AF=0.464;AN=56;BaseQRankSum=1.016;DP=541;FS=3.515;HRun=16;HaplotypeScore=75.0325;InbreedingCoeff=-0.0113;MQ=71.79;MQ0=0;MQRankSum=1.653;QD=3.21;ReadPosRankSum=6.837;VQSLOD=0.0368;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:38:29.38:0,29,171	0/0:3,0:3:2.98:0,3,21	0/0:17,0:11:6.45:0,6,47	0/1:15,0:14:6.08:6,0,48	0/0:13,0:20:38.17:0,38,198	0/1:8,5:13:48.09:48,0,75	1/1:6,13:21:28.72:170,29,0	0/1:20,3:23:7.75:8,0,225	0/1:12,8:21:27.83:28,0,37	0/1:14,8:23:21.99:103,0,22	0/1:9,7:17:9.05:71,0,9	0/1:16,4:21:39.92:40,0,48	0/1:13,5:19:25.28:73,0,25	0/1:13,8:21:27.93:67,0,28	1/1:10,15:25:6.32:138,6,0	1/1:8,12:20:2.69:123,3,0	0/0:26,2:30:41.39:0,41,402	0/1:19,3:23:0.52:1,0,283	0/1:17,1:18:42.65:86,0,43	0/1:8,9:18:38.63:70,0,39	1/1:10,15:26:16.99:202,17,0	0/0:1,0:8:17.28:0,17,99	0/0:13,0:18:23.30:0,23,217	0/0:9,1:24:11.13:0,11,143	0/1:8,2:10:8.15:8,0,40	1/1:8,1:20:20.14:78,20,0	0/1:10,9:21:3.98:67,0,4	1/1:3,0:6:6.06:18,6,0
chr10	62973130	.	AGGG	A	4828.02	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=-7.237;DP=329;FS=9.783;HRun=12;HaplotypeScore=57.0001;InbreedingCoeff=0.7896;MQ=76.21;MQ0=3;MQRankSum=-1.707;QD=22.46;ReadPosRankSum=5.898;VQSLOD=2.3209;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:6:0,6,69	1/1:1,1:2:3:38,3,0	0/0:44,0:15:32.93:0,33,435	0/0:33,0:20:25.31:0,25,288	0/0:3,0:3:0:0,0,0	1/1:10,5:15:21:239,21,0	1/1:1,10:10:24.07:303,24,0	1/1:7,9:15:21.65:274,22,0	1/1:2,5:7:18.05:227,18,0	1/1:4,9:13:24.04:285,24,0	1/1:3,2:5:5.99:76,6,0	1/1:8,4:12:18.02:224,18,0	1/1:0,5:5:12.04:152,12,0	1/1:8,4:13:27.80:294,28,0	1/1:4,11:16:32.56:448,33,0	1/1:2,10:12:21.05:264,21,0	1/1:4,7:11:24.02:288,24,0	1/1:2,8:10:21.05:255,21,0	1/1:1,3:4:9.02:114,9,0	1/1:6,3:9:12:143,12,0	1/1:3,11:15:26.13:308,26,0	0/0:7,0:9:4.97:0,5,19	0/0:2,0:4:3.92:0,4,14	0/0:7,0:8:15.97:0,16,104	1/1:2,5:6:12.03:152,12,0	1/1:6,7:13:15.01:189,15,0	1/1:2,12:15:36.06:443,36,0	1/1:0,3:3:9.03:114,9,0
chr10	62973140	.	GGGT	G	1824.77	PASS	AB=0.974;AC=33;AF=0.611;AN=54;BaseQRankSum=-0.989;DP=317;FS=16.138;HRun=0;HaplotypeScore=64.5964;InbreedingCoeff=-0.0263;MQ=64.97;MQ0=3;MQRankSum=-2.865;QD=8.45;ReadPosRankSum=9.911;VQSLOD=0.0505;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:10.30:0,10,157	0/1:3,0:3:4.14:4,0,40	0/0:42,0:13:20.20:0,20,308	0/0:32,0:16:27.27:0,27,321	./.	1/1:8,0:8:0.44:79,0,0	0/1:12,0:11:22.75:113,0,23	0/1:22,0:20:46.93:47,0,206	1/1:5,1:6:17.62:124,18,0	0/1:10,1:11:27.02:96,0,27	0/1:3,0:3:14.89:32,0,15	1/1:7,0:7:17.29:109,17,0	1/1:5,0:5:11.74:81,12,0	0/1:11,1:12:29.07:113,0,29	1/1:14,1:15:8.84:205,9,0	1/1:11,0:11:4.59:129,5,0	0/1:12,0:12:5.58:109,0,6	0/1:11,0:10:17.50:103,0,18	1/1:4,0:3:8.41:46,8,0	0/1:6,1:7:61.99:78,0,62	0/1:19,1:20:85.19:116,0,85	0/0:11,0:11:15.62:0,16,101	0/1:4,0:4:3.77:4,0,24	0/1:9,0:9:10.32:10,0,110	1/1:6,0:5:11.70:73,12,0	1/1:7,0:7:14.47:94,14,0	0/1:17,0:17:24.94:184,0,25	1/1:4,0:4:8.55:47,9,0
chr10	62973141	.	GGT	G	141.90	PASS	AB=0.956;AC=14;AF=0.259;AN=54;BaseQRankSum=1.663;DP=312;FS=31.519;HRun=0;HaplotypeScore=65.6264;InbreedingCoeff=-0.2327;MQ=65.25;MQ0=3;MQRankSum=-2.630;QD=0.97;ReadPosRankSum=3.215;VQSLOD=0.0753;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:14,0:14:2.13:2,0,115	0/0:3,0:3:8.36:0,8,56	0/0:41,0:12:25.76:0,26,278	0/0:32,0:16:15.17:0,15,226	./.	0/0:7,0:7:4.76:0,5,24	0/0:12,0:11:9.20:0,9,55	0/0:22,0:20:42.48:0,42,312	0/1:6,0:6:5.36:6,0,5	0/1:11,0:11:18.24:18,0,48	0/0:3,0:3:3.34:0,3,24	0/1:7,0:7:3.47:10,0,3	0/1:5,0:5:2.09:2,0,3	0/1:10,0:10:21.59:22,0,30	0/1:15,0:15:6.38:6,0,26	0/1:11,0:11:7.92:8,0,22	0/0:13,0:13:10.69:0,11,66	0/0:11,0:10:6.85:0,7,50	0/0:4,0:3:3.50:0,4,16	0/1:7,0:7:16.27:16,0,56	0/1:20,0:20:1.71:2,0,116	0/1:8,2:10:28.57:29,0,49	0/1:3,1:4:15.99:42,0,16	0/1:6,3:9:25.24:102,0,25	0/0:6,0:5:3.31:0,3,9	0/0:7,0:7:0.84:0,1,8	0/1:17,0:17:5.75:6,0,67	0/0:4,0:4:8.45:0,8,33
chr10	62973194	.	GC	G	5674.64	PASS	AC=50;AF=1.000;AN=50;DP=211;FS=0.000;HRun=4;HaplotypeScore=30.8828;InbreedingCoeff=-0.0251;MQ=45.28;MQ0=2;QD=28.66;VQSLOD=3.3055;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,21:22:57.10:664,57,0	./.	./.	./.	1/1:1,2:3:7.84:77,8,0	1/1:2,8:9:21.05:237,21,0	1/1:1,6:7:18.05:213,18,0	1/1:1,8:8:18.03:200,18,0	1/1:0,4:4:12.03:138,12,0	1/1:1,7:8:24.06:277,24,0	1/1:1,1:2:3.01:36,3,0	1/1:2,5:7:15.05:180,15,0	1/1:1,3:4:9.03:108,9,0	1/1:1,8:9:27.07:312,27,0	1/1:2,11:13:36.09:419,36,0	1/1:0,7:7:12.04:144,12,0	1/1:1,12:13:33.10:395,33,0	1/1:2,6:7:18.06:216,18,0	1/1:0,7:7:18.05:216,18,0	1/1:1,7:8:21.06:247,21,0	1/1:3,12:14:36.11:429,36,0	1/1:2,7:8:18.05:211,18,0	1/1:0,3:3:9.03:108,9,0	1/1:0,6:6:11.73:143,12,0	1/1:1,3:4:12.02:132,12,0	1/1:1,6:7:12.04:144,12,0	1/1:2,8:10:27.08:323,27,0	1/1:0,3:3:9.03:108,9,0
chr10	62987646	.	G	GC	14293.29	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-11.582;DP=703;FS=8.612;HRun=7;HaplotypeScore=68.8810;InbreedingCoeff=0.9973;MQ=81.18;MQ0=0;MQRankSum=-2.361;QD=29.11;ReadPosRankSum=2.596;VQSLOD=5.3724;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,120,1159	0/0:6,0:6:15.01:0,15,139	0/0:18,0:18:44.63:0,45,413	0/0:24,0:24:45.01:0,45,415	0/0:15,0:15:42.07:0,42,406	1/1:3,20:24:57.04:667,57,0	1/1:4,24:28:69.21:833,69,0	0/0:35,0:35:56.99:0,57,533	0/0:12,0:12:36.04:0,36,341	1/1:2,30:33:90.24:1049,90,0	1/1:3,15:18:45.14:543,45,0	1/1:1,29:30:78.24:942,78,0	1/1:1,21:22:51.16:616,51,0	1/1:4,30:34:75.23:901,75,0	1/1:1,37:38:93.29:1122,93,0	1/1:4,27:31:75.23:905,75,0	0/0:30,0:30:84.11:0,84,805	0/0:25,0:25:66.10:0,66,637	1/1:1,13:14:39.12:471,39,0	1/1:2,29:31:72.18:853,72,0	1/1:3,26:29:75.23:906,75,0	1/1:0,18:18:48.15:579,48,0	1/1:4,13:17:33.10:397,33,0	1/1:7,37:44:99:1175,99,0	1/1:2,12:14:33.10:394,33,0	1/1:5,23:28:72.16:829,72,0	1/1:4,19:22:60.18:714,60,0	1/1:3,12:15:33.10:398,33,0
chr10	62987796	.	CCACACACA	C	5350.81	PASS	AB=0.895;AC=31;AF=0.574;AN=54;BaseQRankSum=1.251;DP=648;FS=5.006;HRun=0;HaplotypeScore=156.3657;InbreedingCoeff=0.7804;MQ=65.67;MQ0=16;MQRankSum=-5.931;QD=17.15;ReadPosRankSum=3.280;VQSLOD=3.4784;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:30:9.01:0,9,327	0/0:6,0:8:12.04:0,12,412	./.	0/0:63,0:30:0:0,0,0	0/0:12,0:18:9.01:0,9,171	1/1:12,5:19:11.53:196,12,0	1/1:21,6:27:5.55:150,6,0	0/0:28,0:31:24.08:0,24,674	0/0:13,0:15:24.08:0,24,908	1/1:17,1:18:15.04:322,15,0	1/1:9,3:12:11.99:215,12,0	1/1:10,12:25:29.77:653,30,0	1/1:12,7:21:15.05:337,15,0	1/1:10,7:18:18.06:412,18,0	1/1:9,14:25:39.13:892,39,0	1/1:15,15:30:27.09:676,27,0	0/0:16,0:25:12.03:0,12,260	0/0:17,0:21:30.06:0,30,728	1/1:4,3:9:11.93:187,12,0	1/1:10,6:16:9.03:148,9,0	1/1:21,6:25:6.02:110,6,0	0/0:14,0:22:18.06:0,18,636	0/0:15,0:19:12.04:0,12,375	0/0:15,0:22:30.10:0,30,966	0/1:15,0:17:19.51:20,0,52	1/1:11,6:18:21.03:415,21,0	1/1:12,5:19:24.08:543,24,0	1/1:7,3:10:3.01:75,3,0
chr10	62989552	.	CGTGTGTGTGT	C	1108.37	PASS	AB=0.898;AC=19;AF=0.500;AN=38;BaseQRankSum=3.124;DP=506;FS=24.135;HRun=0;HaplotypeScore=147.0096;InbreedingCoeff=0.2922;MQ=66.76;MQ0=8;MQRankSum=-3.490;QD=4.88;ReadPosRankSum=0.899;VQSLOD=0.9199;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:12.04:0,12,234	./.	0/0:18,0:13:0.47:0,0,1	./.	0/0:17,0:16:11.95:0,12,173	./.	0/1:26,0:27:0.40:82,0,0	0/0:26,0:25:0.47:0,0,1	0/1:18,0:20:18.19:18,0,46	./.	./.	1/1:20,4:24:3.01:88,3,0	1/1:16,0:15:3.01:52,3,0	0/0:16,0:15:0.47:0,0,1	1/1:11,0:11:3.01:52,3,0	1/1:11,5:17:9.03:246,9,0	1/1:26,0:31:6.02:139,6,0	1/1:24,0:28:8.94:209,9,0	0/0:12,0:12:1.25:0,1,3	./.	./.	0/0:18,0:19:3:0,3,25	./.	0/0:18,0:18:5.61:0,6,53	./.	1/1:18,2:20:3.01:88,3,0	0/1:18,5:22:39.39:165,0,39	1/1:8,1:9:3.01:88,3,0
chr10	62992898	.	G	GT	15414.93	PASS	AB=0.855;AC=54;AF=0.964;AN=56;BaseQRankSum=3.146;DP=513;FS=8.387;HRun=0;HaplotypeScore=296.0251;InbreedingCoeff=-0.0338;MQ=56.33;MQ0=1;MQRankSum=-5.847;QD=30.05;ReadPosRankSum=2.628;VQSLOD=2.9630;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,29:29:71.41:815,71,0	1/1:0,9:9:21.06:254,21,0	0/1:9,1:10:23.87:24,0,167	0/1:6,2:8:69.32:69,0,117	1/1:0,23:23:27.05:290,27,0	1/1:1,20:21:57.16:669,57,0	1/1:1,18:19:48.13:567,48,0	1/1:1,17:18:54.17:732,54,0	1/1:1,22:23:69.19:799,69,0	1/1:1,15:16:46.39:591,46,0	1/1:0,7:8:18.05:208,18,0	1/1:0,32:33:96.25:1083,96,0	1/1:0,19:19:57.16:660,57,0	1/1:0,23:22:63.16:706,63,0	1/1:2,25:27:72.20:851,72,0	1/1:0,27:27:81.23:928,81,0	1/1:0,20:20:54.15:629,54,0	1/1:0,16:16:36.09:449,36,0	1/1:0,15:14:45.15:637,45,0	1/1:0,10:10:24.03:267,24,0	1/1:0,19:20:27.07:324,27,0	1/1:3,17:20:48.13:581,48,0	1/1:0,7:7:21.04:215,21,0	1/1:0,15:15:36.08:380,36,0	1/1:1,14:15:36.08:407,36,0	1/1:1,30:32:96.29:1251,96,0	1/1:0,21:21:63.19:752,63,0	1/1:0,8:8:24.03:277,24,0
chr10	62992915	.	GGC	G	19151.32	PASS	AB=0.844;AC=54;AF=0.964;AN=56;BaseQRankSum=0.367;DP=481;FS=4.188;HRun=0;HaplotypeScore=288.1759;InbreedingCoeff=-0.0364;MQ=48.00;MQ0=0;MQRankSum=-2.556;QD=39.82;ReadPosRankSum=2.599;VQSLOD=4.2893;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,25:29:80.97:1091,81,0	1/1:1,10:11:28.34:411,28,0	0/1:7,1:8:53.60:58,0,54	0/1:3,1:4:10.59:42,0,11	1/1:2,19:21:27.49:364,27,0	1/1:0,25:25:75.14:1092,75,0	1/1:0,18:18:51.05:752,51,0	1/1:1,12:13:33.08:485,33,0	1/1:1,19:20:60.14:924,60,0	1/1:1,13:14:42.09:599,42,0	1/1:0,5:5:15.05:221,15,0	1/1:0,36:36:99:1571,102,0	1/1:1,19:20:57.19:891,57,0	1/1:0,21:20:60.20:952,60,0	1/1:0,21:21:63.21:998,63,0	1/1:0,28:28:84.29:1335,84,0	1/1:0,20:20:54.09:802,54,0	1/1:1,14:15:45.12:676,45,0	1/1:1,10:11:33.07:497,33,0	1/1:1,10:11:30.06:422,30,0	1/1:0,14:14:26.96:390,27,0	1/1:1,18:19:45.80:637,46,0	1/1:0,7:7:21.07:314,21,0	1/1:0,16:16:33.11:501,33,0	1/1:2,16:18:41.08:543,41,0	1/1:1,22:23:69.19:1066,69,0	1/1:0,24:24:72.19:1092,72,0	1/1:0,9:9:27.09:427,27,0
chr10	62994308	.	TG	T	418.53	PASS	AB=0.898;AC=13;AF=0.232;AN=56;BaseQRankSum=3.717;DP=454;FS=0.633;HRun=11;HaplotypeScore=75.6520;InbreedingCoeff=0.2256;MQ=84.81;MQ0=0;MQRankSum=0.419;QD=3.15;ReadPosRankSum=0.632;VQSLOD=-0.3213;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:16:20.97:0,21,183	0/1:13,2:15:19.19:19,0,218	0/0:27,0:26:1.97:0,2,220	0/1:21,1:20:8.96:9,0,166	0/0:5,0:9:6.46:0,6,50	0/0:13,0:13:18.37:0,18,186	0/1:13,2:15:10.21:10,0,304	0/0:19,0:19:18.04:0,18,185	0/0:14,1:15:2.41:0,2,224	0/0:10,0:10:6:0,6,57	0/0:7,0:7:9:0,9,82	0/0:29,0:29:63.38:0,63,628	0/0:12,0:12:27.04:0,27,273	0/0:22,0:22:36.52:0,37,361	0/0:28,0:28:54.06:0,54,537	0/0:26,1:28:35.48:0,35,563	0/1:17,2:19:4.22:4,0,352	0/0:18,0:18:2.78:0,3,210	0/1:11,1:13:17.68:18,0,93	0/1:4,1:5:18.45:19,0,18	0/0:13,0:13:8.70:0,9,145	1/1:2,9:11:14.95:123,15,0	1/1:4,8:12:17.95:148,18,0	1/1:2,10:12:26.95:222,27,0	0/1:7,1:9:6.65:7,0,112	0/0:16,0:16:15.04:0,15,160	0/0:20,2:22:20.45:0,20,407	0/0:16,1:17:14.42:0,14,341
chr10	62994558	.	GTGTGTA	G	2400.59	PASS	AB=0.990;AC=21;AF=0.375;AN=56;BaseQRankSum=-7.404;DP=625;FS=0.855;HRun=0;HaplotypeScore=139.7052;InbreedingCoeff=-0.4621;MQ=57.17;MQ0=13;MQRankSum=-1.339;QD=5.39;ReadPosRankSum=-7.453;VQSLOD=-0.0204;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:43:41.63:0,42,517	0/0:11,0:11:20.15:0,20,466	0/1:26,0:10:10.95:11,0,88	0/0:30,0:6:0.62:0,1,41	0/1:24,0:23:7.71:8,0,108	0/1:15,1:16:90.31:245,0,90	0/1:28,1:29:15.10:15,0,61	0/1:29,0:28:99:146,0,568	0/0:23,0:23:40.93:0,41,924	0/1:24,0:23:74.94:324,0,75	0/1:8,0:7:4.81:5,0,71	0/1:27,0:27:13.21:13,0,83	0/1:12,0:12:19.32:56,0,19	0/1:18,0:18:62.10:167,0,62	0/1:29,0:29:61.66:62,0,121	0/0:18,0:18:11.77:0,12,164	0/0:20,0:20:21.08:0,21,701	0/0:25,0:25:42.06:0,42,821	1/1:11,0:11:5.51:175,6,0	0/1:10,0:10:70.81:71,0,159	0/1:43,0:42:99:169,0,367	0/1:17,1:18:3.25:3,0,38	0/0:9,0:9:5.99:0,6,50	0/1:42,0:42:99:465,0,118	0/1:19,1:20:56.39:56,0,64	0/1:27,0:27:58.41:396,0,58	0/1:18,0:18:52.52:53,0,120	0/1:14,0:12:18.15:119,0,18
chr10	62994560	.	GTGTA	G	4222.01	PASS	AB=0.888;AC=37;AF=0.661;AN=56;BaseQRankSum=-2.551;DP=619;FS=0.931;HRun=0;HaplotypeScore=118.5227;InbreedingCoeff=0.3241;MQ=57.32;MQ0=13;MQRankSum=1.492;QD=9.08;ReadPosRankSum=-0.577;VQSLOD=3.7088;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:42:41.85:0,42,393	0/0:11,0:11:20.33:0,20,320	0/1:24,0:9:7.99:8,0,99	0/0:31,0:6:0.62:0,1,41	0/1:22,0:21:28.56:29,0,81	1/1:16,0:16:19.94:286,20,0	1/1:29,1:30:7.03:78,7,0	0/1:29,0:28:99:146,0,470	0/0:24,0:24:43.46:0,43,692	1/1:24,1:24:41.89:510,42,0	0/1:3,5:7:17.42:51,0,17	1/1:25,2:27:7.12:80,7,0	1/1:11,1:12:3.48:56,3,0	1/1:17,1:18:28.45:255,28,0	0/1:9,18:27:4.33:196,0,4	1/1:18,1:19:7.52:74,8,0	0/0:20,0:20:21.03:0,21,478	0/0:25,0:25:41.99:0,42,587	1/1:11,0:11:30.34:239,30,0	0/1:10,0:10:43.74:84,0,44	0/1:42,0:42:16.29:341,0,16	1/1:17,1:18:4.73:61,5,0	1/1:9,0:9:1.16:3,1,0	1/1:39,1:40:90.15:750,90,0	1/1:18,1:19:4.34:41,4,0	1/1:25,2:27:53.56:622,54,0	1/1:17,1:18:10.34:100,10,0	1/1:13,0:11:28.66:212,29,0
chr10	62994562	.	GTA	G	6532.70	PASS	AB=1.000;AC=41;AF=0.732;AN=56;BaseQRankSum=-2.001;DP=609;FS=0.935;HRun=0;HaplotypeScore=95.1422;InbreedingCoeff=0.6191;MQ=57.26;MQ0=13;MQRankSum=0.735;QD=14.20;ReadPosRankSum=1.739;VQSLOD=4.5148;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:40:34.82:0,35,264	0/0:10,0:10:18.20:0,18,165	0/1:23,0:9:7.99:8,0,99	0/0:30,0:5:0.21:0,0,40	0/1:23,0:22:28.09:28,0,80	1/1:16,0:16:44.81:417,45,0	1/1:3,27:30:14.80:179,15,0	0/1:30,0:29:99:146,0,402	0/0:25,0:25:34.63:0,35,480	1/1:23,1:23:64.72:600,65,0	1/1:7,1:7:6.89:72,7,0	1/1:2,24:26:17.51:225,18,0	1/1:1,10:11:6:70,6,0	1/1:16,2:18:38.94:356,39,0	1/1:23,1:24:26.64:276,27,0	1/1:2,16:18:24.01:338,24,0	0/0:18,0:17:16.20:0,16,264	0/0:25,0:25:33.89:0,34,391	1/1:11,0:11:29.87:237,30,0	1/1:9,1:10:10.94:199,11,0	1/1:39,5:43:84.93:792,85,0	1/1:2,16:18:9.01:115,9,0	1/1:0,9:9:5.99:91,6,0	1/1:38,3:41:97.90:898,98,0	1/1:2,17:19:11.96:161,12,0	1/1:25,2:27:76.61:708,77,0	1/1:2,15:17:23.96:339,24,0	1/1:13,0:11:32.92:278,33,0
chr10	62994566	.	G	GTGTA	268.22	PASS	AB=0.915;AC=6;AF=0.107;AN=56;BaseQRankSum=1.446;DP=596;FS=5.524;HRun=0;HaplotypeScore=133.3177;InbreedingCoeff=-0.1381;MQ=57.37;MQ0=12;MQRankSum=0.305;QD=1.99;ReadPosRankSum=0.925;VQSLOD=2.2035;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:38,1:39:99:185,0,418	0/1:9,0:9:36.50:36,0,84	0/1:24,0:9:13.10:13,0,271	0/0:30,0:8:11.53:0,12,114	0/1:13,7:20:59.02:59,0,270	0/0:16,0:16:44.97:0,45,433	0/0:30,0:30:14.85:0,15,182	0/0:28,0:27:38.38:0,38,836	0/0:25,0:25:47.87:0,48,814	0/0:26,0:25:65.89:0,66,604	0/0:8,0:7:8.92:0,9,92	0/0:24,0:24:20.66:0,21,248	0/0:10,0:10:5.88:0,6,74	0/0:16,0:16:41.95:0,42,382	0/0:25,0:25:26.65:0,27,290	0/0:18,0:18:24.08:0,24,347	0/1:13,0:14:49.62:50,0,250	0/1:24,0:26:48.27:48,0,521	0/0:11,0:11:14.95:0,15,154	0/0:9,0:9:20.98:0,21,215	0/0:42,0:41:86.98:0,87,815	0/0:18,0:18:9.03:0,9,119	0/0:9,0:9:6.02:0,6,88	0/0:40,0:40:90.59:0,91,832	0/0:19,0:19:12.04:0,12,166	0/0:26,0:26:71.32:0,71,688	0/0:18,0:18:27.05:0,27,344	0/0:12,0:11:32.93:0,33,267
chr10	62996421	.	T	TC	1610.60	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-6.297;DP=789;FS=6.614;HRun=5;HaplotypeScore=76.5005;InbreedingCoeff=0.9912;MQ=87.33;MQ0=0;MQRankSum=-5.551;QD=30.39;ReadPosRankSum=1.586;VQSLOD=4.3093;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,33:35:90.27:1167,90,0	0/0:11,0:11:30.07:0,30,322	0/0:29,0:29:66.61:0,67,695	0/0:24,0:25:59.31:0,59,597	1/1:0,17:18:45.08:565,45,0	0/0:29,0:29:81.20:0,81,868	0/0:34,0:34:96.24:0,96,1031	0/0:25,0:25:63.11:0,63,658	0/0:29,0:29:84.19:0,84,894	0/0:27,0:27:72.17:0,72,772	0/0:15,0:15:42.10:0,42,450	0/0:40,0:40:99:0,114,1205	0/0:25,0:25:66.15:0,66,701	0/0:39,0:39:99:0,99,1063	0/0:30,0:30:84.19:0,84,894	0/0:43,0:43:99:0,120,1289	0/0:50,0:51:99:0,131,1370	0/0:38,0:38:99:0,105,1128	0/0:21,0:21:54.13:0,54,578	0/0:11,0:11:30.07:0,30,321	0/0:68,0:68:99:0,177,1866	0/0:16,0:16:36.09:0,36,384	0/0:19,0:19:51.06:0,51,525	0/0:37,0:37:99:0,105,1128	0/0:26,0:26:72.18:0,72,773	0/0:20,0:20:54.10:0,54,569	0/0:22,0:22:54.13:0,54,577	0/0:6,0:6:15.01:0,15,150
chr10	62998722	.	A	AT	10271	PASS	AB=0.538;AC=41;AF=0.732;AN=56;BaseQRankSum=-8.223;DP=545;FS=13.505;HRun=9;HaplotypeScore=59.5747;InbreedingCoeff=0.8849;MQ=75.66;MQ0=1;MQRankSum=-3.004;QD=24.93;ReadPosRankSum=2.048;VQSLOD=4.6610;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,17:26:54.09:574,54,0	0/0:5,0:5:15:0,15,130	0/0:15,0:15:32.28:0,32,258	0/0:11,0:11:21.09:0,21,179	1/1:1,19:20:54.11:583,54,0	1/1:3,26:29:75.20:830,75,0	1/1:2,21:23:31.10:571,31,0	0/0:31,0:31:80.97:0,81,700	0/0:26,0:25:53.94:0,54,460	1/1:4,21:25:57.15:629,57,0	1/1:4,10:14:33.04:347,33,0	1/1:8,24:32:66.14:717,66,0	0/1:2,12:14:13.01:326,0,13	1/1:6,18:24:51.08:564,51,0	1/1:2,30:32:81.22:896,81,0	1/1:2,14:16:16.06:405,16,0	0/0:26,0:26:68.95:0,69,593	0/0:19,0:19:44.70:0,45,371	1/1:4,10:14:36.06:378,36,0	1/1:4,11:15:33.09:365,33,0	1/1:4,12:16:33.09:365,33,0	1/1:3,11:15:35.92:372,36,0	1/1:5,9:14:33.08:358,33,0	1/1:5,7:12:6.27:238,6,0	1/1:12,14:27:50.99:537,51,0	1/1:4,14:18:22.07:472,22,0	1/1:5,17:22:57.13:615,57,0	1/1:1,3:4:12.03:129,12,0
chr10	62998786	.	GT	G	7090.40	PASS	AB=0.748;AC=52;AF=0.929;AN=56;BaseQRankSum=-3.394;DP=497;FS=27.714;HRun=12;HaplotypeScore=68.0400;InbreedingCoeff=0.3523;MQ=75.55;MQ0=2;MQRankSum=-4.408;QD=15.05;ReadPosRankSum=2.862;VQSLOD=3.5831;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:12,22:34:30.20:394,0,30	1/1:0,4:4:11.95:93,12,0	0/0:26,0:18:33.36:0,33,221	0/1:14,1:13:19.99:20,0,74	1/1:4,17:21:35.77:276,36,0	1/1:10,9:20:43.77:316,44,0	1/1:5,14:19:47.62:361,48,0	1/1:9,18:29:8.40:383,8,0	1/1:1,0:12:20.36:59,20,0	1/1:4,19:24:58.81:447,59,0	1/1:1,17:20:52.82:401,53,0	1/1:4,12:16:44.76:342,45,0	1/1:5,9:15:7.57:226,8,0	1/1:4,6:12:27.91:192,28,0	1/1:6,5:12:25.61:175,26,0	1/1:5,7:13:1.46:181,1,0	1/1:5,19:26:24.43:353,24,0	1/1:1,16:18:38.85:302,39,0	1/1:6,19:26:61.71:457,62,0	1/1:5,7:14:24.96:172,25,0	1/1:4,3:8:16.97:119,17,0	1/1:2,6:9:22.96:168,23,0	1/1:1,12:13:32.87:255,33,0	1/1:6,9:15:15.26:215,15,0	1/1:7,17:25:22.30:335,22,0	1/1:6,21:29:71.80:536,72,0	1/1:2,13:16:34.90:261,35,0	1/1:1,1:4:10.02:54,10,0
chr10	62999329	.	GA	G	987.84	PASS	AB=0.939;AC=9;AF=0.161;AN=56;BaseQRankSum=8.599;DP=552;FS=0.000;HRun=11;HaplotypeScore=55.9012;InbreedingCoeff=0.6367;MQ=55.47;MQ0=18;MQRankSum=-0.596;QD=8.23;ReadPosRankSum=1.991;VQSLOD=1.8086;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,3:30:22.52:0,23,628	0/0:6,0:6:15.04:0,15,160	0/1:24,0:7:9.48:16,0,9	0/0:17,0:3:8.99:0,9,78	0/0:28,0:26:48.12:0,48,512	0/0:17,0:17:41.94:0,42,430	0/0:18,1:19:20.47:0,20,423	0/0:33,0:32:81.15:0,81,825	0/0:15,1:16:18.19:0,18,383	0/0:17,0:16:26.20:0,26,296	0/0:10,0:10:27.01:0,27,268	0/0:13,0:13:28.61:0,29,283	0/0:15,0:15:24.95:0,25,257	0/0:14,0:14:27.03:0,27,267	0/1:10,1:11:0.59:1,0,194	0/0:20,1:21:25.09:0,25,458	0/0:36,0:36:90.19:0,90,940	0/0:29,0:29:78.16:0,78,819	0/0:18,0:20:20.21:0,20,357	0/1:16,2:18:4.21:4,0,352	0/0:21,2:23:4.79:0,5,435	1/1:5,9:14:28.98:227,29,0	1/1:4,11:14:26.14:204,26,0	1/1:6,30:37:48:684,48,0	0/0:16,1:18:8.43:0,8,288	0/0:20,0:22:56.95:0,57,568	0/0:19,0:19:30.08:0,30,319	0/0:7,0:7:19.23:0,19,167
chr10	63000340	.	GC	G	1161.09	PASS	AC=8;AF=0.148;AN=54;BaseQRankSum=4.867;DP=492;FS=0.000;HRun=10;HaplotypeScore=59.3982;InbreedingCoeff=0.8912;MQ=74.50;MQ0=7;MQRankSum=-4.394;QD=13.82;ReadPosRankSum=1.105;VQSLOD=3.5386;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:19:11.60:0,12,92	1/1:1,7:8:18:156,18,0	0/0:40,0:22:40.77:0,41,391	0/0:21,1:12:18.37:0,18,160	0/0:2,0:8:14.61:0,15,89	0/0:18,0:18:7.67:0,8,306	0/0:25,0:25:53.71:0,54,558	1/1:17,8:26:24.77:199,25,0	0/0:5,0:14:14.37:0,14,90	0/0:10,0:10:21.03:0,21,216	./.	0/0:25,1:27:45.95:0,46,698	0/0:9,1:10:4.03:0,4,273	0/0:16,0:16:42.03:0,42,447	0/0:12,0:13:33.09:0,33,360	0/0:18,0:18:48.11:0,48,521	1/1:5,28:33:77.97:677,78,0	1/1:4,13:17:32.99:287,33,0	0/0:18,0:18:41.70:0,42,439	0/0:9,0:9:24.04:0,24,247	0/0:26,2:28:30.94:0,31,505	0/0:14,0:14:24.06:0,24,265	0/0:10,0:11:17.84:0,18,166	0/0:29,1:30:37.08:0,37,614	0/0:13,0:13:33.07:0,33,351	0/0:16,1:17:7:0,7,288	0/0:16,0:15:36.08:0,36,386	0/0:11,0:11:30.03:0,30,305
chr10	63000382	.	AGTGTGT	A	1309.96	PASS	AB=0.794;AC=17;AF=0.327;AN=52;BaseQRankSum=7.786;DP=486;FS=20.159;HRun=0;HaplotypeScore=117.6144;InbreedingCoeff=0.5562;MQ=58.03;MQ0=13;MQRankSum=-5.791;QD=7.57;ReadPosRankSum=3.912;VQSLOD=0.9633;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:24:8.59:0,9,104	1/1:6,0:8:6.02:84,6,0	./.	./.	1/1:5,1:9:0.88:2,1,0	0/0:15,0:16:17.86:0,18,268	0/0:14,0:17:21.06:0,21,289	0/0:23,0:22:0.47:0,0,1	0/0:10,0:11:12.50:0,12,169	0/0:16,0:15:24.04:0,24,444	0/0:12,0:10:21.07:0,21,570	0/1:17,5:22:62.69:227,0,63	1/1:11,6:17:12.04:241,12,0	0/1:6,4:10:27.94:110,0,28	0/0:14,0:14:27.09:0,27,745	0/0:16,0:15:27.09:0,27,669	1/1:31,0:37:24.03:286,24,0	1/1:10,0:14:18.05:236,18,0	0/0:13,0:12:12.04:0,12,252	0/0:14,0:13:6:0,6,56	0/0:31,0:29:27.09:0,27,640	1/1:9,0:13:9.03:125,9,0	1/1:5,0:11:3.01:42,3,0	0/1:24,0:29:60.89:125,0,61	0/0:13,0:14:24.08:0,24,627	0/0:21,0:21:9.03:0,9,250	0/0:26,0:26:30.57:0,31,817	0/0:8,0:7:9.03:0,9,166
chr10	63001460	.	CTTT	C	3767.76	PASS	AB=0.667;AC=32;AF=0.571;AN=56;BaseQRankSum=-1.318;DP=497;FS=3.522;HRun=17;HaplotypeScore=85.9682;InbreedingCoeff=0.7744;MQ=63.92;MQ0=5;MQRankSum=0.233;QD=14.11;ReadPosRankSum=4.607;VQSLOD=1.7927;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:44:99:0,105,1307	0/0:3,0:5:0.70:0,1,35	0/0:22,0:14:24.25:0,24,202	0/0:12,0:6:0:0,0,0	0/0:11,0:14:36.04:0,36,460	1/1:3,13:22:20.71:352,21,0	0/1:11,10:22:8.79:258,0,9	0/0:14,0:23:37.91:0,38,298	0/1:3,0:6:16.33:16,0,31	1/1:6,5:12:13.30:137,13,0	1/1:3,2:8:13.38:113,13,0	1/1:7,22:30:44.31:449,44,0	1/1:4,2:6:15.01:149,15,0	1/1:3,10:15:23.54:249,24,0	1/1:3,17:21:43.63:460,44,0	1/1:7,9:17:15.84:168,16,0	0/0:17,1:37:8.40:0,8,316	0/0:8,0:25:44.83:0,45,359	1/1:6,1:11:17.10:133,17,0	1/1:5,11:18:32.63:312,33,0	1/1:9,7:21:21.91:188,22,0	0/0:7,0:17:28.16:0,28,249	0/0:6,0:10:19.23:0,19,201	0/0:10,0:19:28.46:0,28,207	1/1:5,10:16:25.69:239,26,0	1/1:8,8:18:22.11:229,22,0	1/1:5,6:13:14.26:127,14,0	1/1:4,6:11:20.79:188,21,0
chr10	63001475	.	TTTC	T	1006.52	PASS	AB=0.988;AC=20;AF=0.370;AN=54;BaseQRankSum=9.679;DP=543;FS=18.736;HRun=0;HaplotypeScore=99.1174;InbreedingCoeff=-0.3893;MQ=53.02;MQ0=8;MQRankSum=0.546;QD=3.12;ReadPosRankSum=7.925;VQSLOD=-0.2294;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,121,1476	0/1:7,0:5:5.22:5,0,47	0/1:19,0:9:0.94:1,0,126	./.	0/0:13,0:13:34.68:0,35,402	0/1:24,0:24:59.73:83,0,60	0/1:24,0:24:90.32:90,0,105	0/0:25,0:25:48.38:0,48,395	0/1:10,0:10:37.91:38,0,96	0/1:12,0:11:21.01:21,0,92	0/1:13,0:13:10.30:10,0,55	0/1:30,2:32:57.98:194,0,58	0/1:9,1:10:16.55:91,0,17	0/1:18,0:18:80.49:84,0,80	0/1:28,0:28:99:108,0,120	0/1:14,1:15:39.17:45,0,39	0/0:40,0:40:55.12:0,55,524	0/0:33,0:32:65.60:0,66,600	0/1:12,0:11:37.26:37,0,48	1/1:16,0:16:20.30:120,20,0	0/1:21,0:21:34.77:35,0,83	0/0:15,0:15:32.29:0,32,280	0/0:11,0:11:17.63:0,18,254	0/0:26,0:25:51.84:0,52,456	0/1:19,0:19:45.57:46,0,123	0/1:15,0:15:46.40:79,0,46	0/1:16,0:15:14.66:15,0,79	0/1:12,0:12:42.31:65,0,42
chr10	63001995	.	TAGAC	T	3103.25	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=10.525;DP=779;FS=1.055;HRun=0;HaplotypeScore=127.1052;InbreedingCoeff=0.9878;MQ=79.68;MQ0=0;MQRankSum=-3.743;QD=44.97;ReadPosRankSum=1.798;VQSLOD=4.2703;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,42:43:99:2088,114,0	0/0:7,0:7:18.06:0,18,486	0/0:27,0:27:75.24:0,75,1824	0/0:23,0:22:63.21:0,63,1559	1/1:2,24:26:60.21:1137,60,0	0/0:19,0:19:57.20:0,57,1524	0/0:44,0:44:99:0,117,2986	0/0:40,0:40:99:0,114,3027	0/0:29,0:29:84.27:0,84,2197	0/0:36,0:36:99:0,102,2628	0/0:16,0:16:45.15:0,45,1168	0/0:31,0:31:87.30:0,87,2309	0/0:17,0:17:48.16:0,48,1294	0/0:19,0:19:54.17:0,54,1399	0/0:29,0:29:81.28:0,81,2118	0/0:32,0:32:90.31:0,90,2430	0/0:45,0:45:99:0,129,3451	0/0:29,0:29:87.30:0,87,2348	0/0:31,0:31:81.27:0,81,2058	0/0:22,0:22:63.20:0,63,1590	0/0:28,0:28:84.29:0,84,2253	0/0:24,0:24:63.22:0,63,1676	0/0:20,0:20:54.19:0,54,1442	0/0:41,0:41:99:0,114,2966	0/0:24,0:24:66.23:0,66,1783	0/0:36,0:36:99:0,99,2524	0/0:36,0:36:99:0,105,2778	0/0:5,0:5:15.05:0,15,405
chr10	63004778	.	CAGTTATT	C	2289.98	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.881;DP=854;FS=5.641;HRun=0;HaplotypeScore=191.4434;InbreedingCoeff=0.9948;MQ=85.51;MQ0=0;MQRankSum=-9.437;QD=35.78;ReadPosRankSum=1.171;VQSLOD=3.2069;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,33:36:66.23:1712,66,0	0/0:6,0:6:18.06:0,18,720	0/0:32,0:32:78.27:0,78,2926	0/0:24,0:24:66.23:0,66,2324	1/1:7,21:28:27.09:700,27,0	0/0:15,0:15:42.14:0,42,1614	0/0:44,0:44:99:0,123,4770	0/0:28,0:28:72.24:0,72,2747	0/0:32,0:32:93.32:0,93,3617	0/0:39,0:39:99:0,114,4294	0/0:15,0:15:45.14:0,45,1656	0/0:32,0:32:93.32:0,93,3688	0/0:29,0:29:78.27:0,78,3007	0/0:33,0:33:96.29:0,96,3637	0/0:48,0:48:99:0,144,5464	0/0:42,0:42:99:0,120,4741	0/0:25,0:25:75.26:0,75,2890	0/0:33,0:33:96.33:0,96,3688	0/0:30,0:30:87.27:0,87,3190	0/0:28,0:28:78.25:0,78,2803	0/0:59,0:59:99:0,175,6808	0/0:30,0:30:84.29:0,84,3143	0/0:23,0:23:69.24:0,69,2708	0/0:40,0:40:99:0,114,4550	0/0:26,0:26:78.27:0,78,3027	0/0:29,0:29:84.29:0,84,3238	0/0:39,0:39:99:0,114,4353	0/0:9,0:9:27.09:0,27,920
chr10	63005984	.	CGTGTGTGTGTGTGT	C	2958.82	PASS	AB=0.809;AC=34;AF=0.739;AN=46;BaseQRankSum=1.552;DP=631;FS=1.551;HRun=0;HaplotypeScore=199.4254;InbreedingCoeff=0.2212;MQ=59.89;MQ0=14;MQRankSum=0.394;QD=6.85;ReadPosRankSum=3.789;VQSLOD=2.0962;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:0:0,0,0	0/0:3,0:3:0:0,0,0	./.	./.	1/1:23,0:22:0.94:2,1,0	./.	0/1:34,7:40:37.93:105,0,38	0/0:16,0:16:2.98:0,3,21	0/1:9,0:12:41.36:41,0,134	1/1:22,9:31:18.89:170,19,0	1/1:10,0:8:2.97:20,3,0	1/1:30,9:38:7.09:327,7,0	1/1:16,0:16:5.88:118,6,0	1/1:19,2:22:10.28:293,10,0	1/1:24,8:32:17.95:598,18,0	1/1:10,6:18:14.65:496,15,0	1/1:27,0:26:8.09:242,8,0	1/1:22,0:21:3.01:95,3,0	1/1:10,0:9:2.23:49,2,0	./.	1/1:58,0:56:9.03:132,9,0	1/1:17,0:20:3.58:13,4,0	1/1:11,2:14:3.01:58,3,0	0/0:30,0:41:0.78:0,1,1	1/1:10,8:18:6.02:190,6,0	0/0:26,0:26:2.44:0,2,6	1/1:12,3:15:3.01:116,3,0	./.
chr10	63007987	.	GAA	G	4319.50	PASS	AB=0.607;AC=36;AF=0.643;AN=56;BaseQRankSum=4.686;DP=567;FS=0.810;HRun=15;HaplotypeScore=96.1164;InbreedingCoeff=0.6316;MQ=66.84;MQ0=2;MQRankSum=-0.452;QD=10.36;ReadPosRankSum=3.679;VQSLOD=3.8745;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:18,6:41:49.90:50,0,229	0/0:5,0:5:5.99:0,6,50	0/0:20,0:12:8.46:0,8,87	0/0:11,0:7:0.47:0,0,1	0/0:8,0:22:24.40:0,24,144	1/1:4,13:18:41.72:355,42,0	1/1:6,6:13:14.44:162,14,0	0/0:18,0:21:34.58:0,35,390	0/0:15,0:16:40.84:0,41,452	1/1:12,13:25:29.64:263,30,0	1/1:5,13:22:34.87:317,35,0	1/1:12,13:26:20.64:224,21,0	1/1:3,14:18:20.73:273,21,0	1/1:3,13:16:32.87:290,33,0	1/1:4,12:18:20.63:317,21,0	1/1:9,16:27:34.66:345,35,0	0/0:24,1:31:47.51:0,48,687	0/0:18,1:21:18.19:0,18,589	1/1:8,9:23:25.50:264,25,0	1/1:3,9:13:29.72:250,30,0	1/1:4,10:15:13.92:175,14,0	0/1:7,2:26:47.93:48,0,95	0/1:8,2:17:33.92:34,0,35	0/1:5,0:24:4.84:5,0,86	1/1:2,13:18:41.19:326,41,0	1/1:11,15:29:47:375,47,0	1/1:9,4:18:10.34:131,10,0	1/1:4,4:9:14.64:117,15,0
chr10	63009130	.	A	AG	497.24	PASS	AB=0.854;AC=12;AF=0.222;AN=54;BaseQRankSum=-1.156;DP=369;FS=4.968;HRun=8;HaplotypeScore=61.3010;InbreedingCoeff=0.5204;MQ=88.64;MQ0=21;MQRankSum=-2.971;QD=7.77;ReadPosRankSum=0.337;VQSLOD=0.8047;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,7:10:21.06:238,21,0	./.	0/0:51,0:32:26.23:0,26,212	0/0:45,0:24:10.05:0,10,78	1/1:7,4:11:11.62:114,12,0	0/0:13,0:13:17.94:0,18,147	0/0:23,0:21:45.02:0,45,410	0/0:7,0:17:24.88:0,25,90	0/0:10,0:9:26.98:0,27,239	0/0:7,0:6:8.97:0,9,80	0/0:6,1:7:6:0,6,55	0/0:10,0:9:15:0,15,137	0/0:8,0:8:11.98:0,12,106	0/0:7,0:6:14.98:0,15,129	0/0:7,0:7:8.99:0,9,82	0/0:5,3:8:8.99:0,9,82	0/0:7,0:18:21.18:0,21,62	0/0:2,0:6:8.13:0,8,24	0/1:8,0:8:15.28:15,0,66	0/1:2,0:3:3.94:4,0,19	0/0:19,0:19:32.91:0,33,287	0/1:0,1:2:1.84:29,0,2	1/1:3,3:4:3.01:35,3,0	1/1:3,12:15:18.05:203,18,0	0/1:6,0:4:16.38:16,0,43	0/0:21,0:19:23.26:0,23,185	0/0:13,0:13:26.94:0,27,233	0/0:10,0:8:14.22:0,14,117
chr10	63009319	.	T	TA	615.85	PASS	AB=1.000;AC=6;AF=0.111;AN=54;BaseQRankSum=-1.903;DP=379;FS=6.321;HRun=11;HaplotypeScore=42.1628;InbreedingCoeff=0.5561;MQ=69.25;MQ0=2;MQRankSum=-0.433;QD=7.90;ReadPosRankSum=0.041;VQSLOD=1.2546;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,26:30:51.10:518,51,0	0/0:2,0:2:5.97:0,6,45	0/1:19,0:12:21.16:21,0,47	0/1:18,0:10:34.20:34,0,39	1/1:4,6:10:19.81:177,20,0	0/0:14,0:14:35.85:0,36,278	0/0:9,0:9:17.90:0,18,137	0/0:40,0:39:88.83:0,89,676	0/0:9,0:9:17.84:0,18,139	0/0:13,0:13:29.83:0,30,226	0/0:10,0:10:26.87:0,27,205	0/0:14,0:14:32.79:0,33,249	0/0:12,0:12:20.85:0,21,158	0/0:6,0:6:14.32:0,14,100	0/0:14,0:14:32.86:0,33,255	0/0:14,0:14:38.84:0,39,299	0/0:29,0:29:58.86:0,59,512	0/0:19,0:20:45.87:0,46,334	0/0:15,0:14:31.68:0,32,233	0/0:7,0:7:20.91:0,21,161	0/0:4,0:4:8.96:0,9,68	./.	0/0:8,0:8:20.91:0,21,159	0/0:5,0:5:11.93:0,12,93	0/0:14,1:15:11.38:0,11,271	0/0:18,0:18:47.80:0,48,370	0/0:13,0:13:35.86:0,36,278	0/0:8,0:9:22.94:0,23,168
chr10	63010557	.	T	TA	3195.54	PASS	AB=0.829;AC=33;AF=0.611;AN=54;BaseQRankSum=-4.410;DP=473;FS=5.573;HRun=12;HaplotypeScore=54.2113;InbreedingCoeff=0.5459;MQ=65.73;MQ0=10;MQRankSum=1.277;QD=9.43;ReadPosRankSum=1.018;VQSLOD=2.4772;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:29.75:0,30,326	0/0:7,0:8:13.95:0,14,93	0/1:37,1:11:30.22:30,0,47	0/1:37,0:15:3.98:4,0,56	0/0:19,0:20:28.47:0,28,180	1/1:8,13:21:42.04:398,42,0	1/1:4,5:9:3:29,3,0	0/0:26,0:26:35.01:0,35,238	0/0:7,0:7:5.99:0,6,61	1/1:6,10:16:24:221,24,0	0/1:4,15:19:8.02:220,0,8	1/1:8,9:17:37.77:329,38,0	1/1:3,6:9:12.02:117,12,0	1/1:2,15:17:15.02:146,15,0	1/1:9,5:14:24:213,24,0	1/1:2,1:2:3:29,3,0	0/0:33,0:33:59.19:0,59,417	0/1:17,1:17:12.75:13,0,182	1/1:6,14:19:36.01:334,36,0	0/1:7,7:14:3.93:118,0,4	1/1:1,3:4:6.01:58,6,0	0/0:3,0:3:5.95:0,6,42	./.	0/0:6,0:6:8.89:0,9,66	1/1:8,10:18:13.13:163,13,0	1/1:9,21:30:31.35:459,31,0	1/1:6,17:23:42:392,42,0	1/1:6,3:9:12.01:112,12,0
chr10	63010759	.	AAG	A	1187.55	PASS	AB=0.924;AC=30;AF=0.536;AN=56;BaseQRankSum=2.514;DP=399;FS=0.000;HRun=0;HaplotypeScore=76.9665;InbreedingCoeff=0.4771;MQ=61.61;MQ0=14;MQRankSum=1.202;QD=4.33;ReadPosRankSum=6.640;VQSLOD=1.6083;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:16:42.13:0,42,770	0/0:6,0:6:17.69:0,18,124	0/1:24,0:7:16.42:16,0,119	0/1:23,0:8:4.58:5,0,123	0/0:10,0:10:21.04:0,21,288	1/1:20,0:18:13.51:96,14,0	0/1:3,2:5:5.93:13,0,6	0/0:19,0:19:41.54:0,42,397	0/0:7,0:6:11.66:0,12,93	1/1:14,1:14:10.66:143,11,0	1/1:18,1:19:3.46:137,3,0	1/1:13,0:12:4.28:63,4,0	0/1:9,1:10:6.12:25,0,6	1/1:13,0:13:0.90:81,1,0	1/1:14,1:14:18.70:82,19,0	0/1:11,1:10:14.77:34,0,15	0/0:30,0:30:60.54:0,61,499	0/0:9,0:9:19.19:0,19,164	1/1:13,1:11:2.02:126,2,0	1/1:22,2:23:11.84:112,12,0	1/1:7,0:7:13.18:55,13,0	0/0:6,0:6:14.24:0,14,151	0/0:7,0:7:20.72:0,21,212	0/0:14,0:14:42:0,42,541	1/1:16,0:16:13.36:102,13,0	1/1:12,0:12:28.78:145,29,0	1/1:22,2:24:2.84:119,3,0	0/1:8,0:8:8.53:26,0,9
chr10	63010760	.	AG	A	3594.59	PASS	AB=0.751;AC=32;AF=0.571;AN=56;BaseQRankSum=-0.588;DP=400;FS=7.921;HRun=9;HaplotypeScore=65.0258;InbreedingCoeff=0.8370;MQ=61.69;MQ0=14;MQRankSum=1.502;QD=14.49;ReadPosRankSum=4.662;VQSLOD=3.3915;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:17:42.10:0,42,468	0/0:7,0:7:17.87:0,18,134	0/0:24,0:7:4.12:0,4,51	0/1:22,0:8:1.90:2,0,50	0/0:9,0:10:14.99:0,15,148	1/1:1,19:18:33.02:301,33,0	1/1:3,2:5:6:54,6,0	0/0:18,0:18:35.86:0,36,357	0/0:8,0:7:6:0,6,58	1/1:3,12:14:35.85:295,36,0	1/1:3,16:19:41.92:365,42,0	1/1:3,10:12:21.01:191,21,0	1/1:2,8:10:12:110,12,0	1/1:3,10:13:30.01:274,30,0	1/1:1,14:14:21.01:192,21,0	1/1:4,8:10:12:109,12,0	0/0:30,0:30:52.63:0,53,533	0/0:9,0:9:15.03:0,15,157	1/1:5,8:10:26.92:227,27,0	0/1:4,21:24:1.83:187,0,2	1/1:0,7:7:15.01:137,15,0	0/0:7,0:7:15.39:0,15,135	0/0:7,0:7:14.89:0,15,134	0/0:14,0:14:39.04:0,39,390	1/1:2,14:16:27.91:270,28,0	1/1:0,12:12:32.68:279,33,0	1/1:4,19:23:51.03:465,51,0	1/1:0,7:7:15.01:137,15,0
chr10	63010863	.	A	AAAC	2962.58	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-11.425;DP=599;FS=5.320;HRun=0;HaplotypeScore=94.7717;InbreedingCoeff=0.9300;MQ=60.28;MQ0=12;MQRankSum=2.922;QD=27.69;ReadPosRankSum=-1.242;VQSLOD=2.9545;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:24:38.73:0,39,281	1/1:4,4:8:15.05:295,15,0	0/0:15,0:7:5.75:0,6,56	0/0:21,0:7:6.02:0,6,83	0/0:26,0:25:42.64:0,43,333	0/0:14,0:14:27.08:0,27,360	0/0:23,0:23:33.08:0,33,437	1/1:15,27:44:78.15:1277,78,0	0/0:15,0:15:36.06:0,36,445	0/0:21,0:21:42.14:0,42,582	0/0:23,0:23:54.15:0,54,714	0/0:13,0:13:21.02:0,21,254	0/0:12,0:11:21.07:0,21,291	0/0:15,0:15:36.12:0,36,500	0/0:20,0:20:36.12:0,36,499	0/0:21,0:21:57.01:0,57,759	1/1:11,25:36:51.18:1013,51,0	1/1:2,14:19:27.09:536,27,0	0/0:16,0:14:21.07:0,21,291	0/0:19,0:19:36.10:0,36,466	0/0:29,0:29:54.16:0,54,716	0/0:12,0:12:27.09:0,27,375	0/0:10,0:10:15.05:0,15,207	0/0:36,0:36:84.23:0,84,1125	0/0:23,0:24:48.13:0,48,646	0/0:35,0:35:78.24:0,78,1050	0/0:29,0:28:66.20:0,66,883	0/0:13,0:13:36.11:0,36,483
chr10	63010877	.	AC	A	914.65	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=10.014;DP=605;FS=6.522;HRun=1;HaplotypeScore=78.6034;InbreedingCoeff=0.9947;MQ=62.05;MQ0=6;MQRankSum=-3.858;QD=16.94;ReadPosRankSum=-1.619;VQSLOD=3.1176;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,13:24:51:516,51,0	0/0:7,0:7:21.01:0,21,205	0/0:22,0:20:54.31:0,54,719	0/0:15,0:7:21.07:0,21,308	1/1:13,13:25:36.62:521,37,0	0/0:18,0:18:45.14:0,45,680	0/0:21,0:21:57.19:0,57,876	0/0:48,0:48:99:0,141,1751	0/0:15,0:15:45.15:0,45,703	0/0:27,0:27:81.27:0,81,1235	0/0:21,0:21:63.21:0,63,995	0/0:13,0:13:36.10:0,36,514	0/0:12,0:12:30.10:0,30,463	0/0:14,0:14:42.13:0,42,642	0/0:18,0:18:48.16:0,48,751	0/0:24,0:24:66.02:0,66,1039	0/0:30,0:30:66.05:0,66,657	0/0:24,0:24:48.08:0,48,547	0/0:14,0:12:36.12:0,36,548	0/0:15,0:15:45.15:0,45,705	0/0:40,0:40:99:0,111,1649	0/0:12,0:12:36.12:0,36,556	0/0:9,0:9:27.09:0,27,412	0/0:37,0:37:99:0,108,1682	0/0:21,0:21:61.09:0,61,943	0/0:32,0:32:96.33:0,96,1514	0/0:28,0:27:84.29:0,84,1314	0/0:13,0:13:39.13:0,39,618
chr10	63011030	.	T	TA	1182.83	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-6.230;DP=532;FS=4.139;HRun=7;HaplotypeScore=53.3620;InbreedingCoeff=0.9554;MQ=66.54;MQ0=0;MQRankSum=-1.228;QD=23.19;ReadPosRankSum=1.136;VQSLOD=3.8553;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,27:30:57.17:688,57,0	0/0:7,0:7:21.03:0,21,203	0/0:10,0:10:20.88:0,21,165	0/0:11,0:11:17.99:0,18,164	1/1:0,21:21:51.16:616,51,0	0/0:10,0:10:30.05:0,30,290	0/0:20,0:20:54.09:0,54,521	0/0:30,0:30:66.08:0,66,633	0/0:20,0:20:48.48:0,48,449	0/0:13,0:13:36.05:0,36,343	0/0:13,0:13:24.03:0,24,232	0/0:25,0:25:60.09:0,60,579	0/0:20,0:20:54.08:0,54,522	0/0:24,0:24:60.08:0,60,574	0/0:29,0:27:65.95:0,66,631	0/0:22,0:22:60.09:0,60,579	0/0:21,0:21:54.07:0,54,516	0/0:17,0:17:42.07:0,42,405	0/0:25,0:24:63.09:0,63,608	0/0:14,0:14:36.06:0,36,348	0/0:29,0:29:63.09:0,63,608	0/0:7,0:7:18.02:0,18,174	0/0:7,0:7:21.03:0,21,203	0/0:18,0:18:45.01:0,45,425	0/0:15,0:15:36.05:0,36,348	0/0:33,0:33:90.14:0,90,869	0/0:37,0:37:90.11:0,90,864	0/0:3,0:3:9.01:0,9,87
chr10	63011468	.	A	AACAC	3623.11	PASS	AB=0.832;AC=38;AF=0.792;AN=48;BaseQRankSum=-3.087;DP=569;FS=0.000;HRun=0;HaplotypeScore=123.1512;InbreedingCoeff=0.1407;MQ=64.05;MQ0=13;MQRankSum=3.464;QD=7.95;ReadPosRankSum=-2.121;VQSLOD=2.0208;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:39,2:48:34.90:590,35,0	1/1:5,0:5:3.01:37,3,0	./.	./.	1/1:18,0:23:2.94:18,3,0	1/1:13,1:14:5.83:86,6,0	1/1:14,2:17:11.78:222,12,0	0/1:25,0:25:0:0,0,0	0/1:11,1:18:1.66:95,0,2	1/1:21,0:25:24.06:383,24,0	1/1:8,3:11:6.02:118,6,0	1/1:10,6:21:17.26:247,17,0	1/1:6,4:14:8.77:152,9,0	0/1:10,1:22:15.20:166,0,15	1/1:17,5:23:10.65:161,11,0	1/1:14,7:22:17.79:363,18,0	0/1:18,0:26:28.04:45,0,28	0/1:21,0:22:29.13:29,0,121	1/1:10,0:13:9.20:102,9,0	./.	1/1:8,9:20:3.01:70,3,0	0/0:8,0:10:3.37:0,3,9	./.	0/0:18,0:27:17.05:0,17,146	1/1:14,3:18:5.67:140,6,0	1/1:17,5:24:35.35:517,35,0	1/1:19,0:26:5.67:29,6,0	0/1:12,0:12:52.55:53,0,80
chr10	63011615	.	GTGGTT	G	1287.83	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.496;DP=660;FS=4.256;HRun=0;HaplotypeScore=125.6193;InbreedingCoeff=0.9459;MQ=84.30;MQ0=0;MQRankSum=-5.748;QD=25.25;ReadPosRankSum=-0.397;VQSLOD=2.8966;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,30:31:56.22:1265,56,0	0/0:10,0:10:30.10:0,30,969	0/0:24,0:24:68.78:0,69,1905	0/0:25,0:24:66.22:0,66,1777	1/1:0,20:20:6.49:135,6,0	0/0:7,0:7:21.07:0,21,605	0/0:32,0:32:96.29:0,96,2995	0/0:38,0:38:99:0,114,3426	0/0:24,0:24:72.25:0,72,2202	0/0:21,0:21:57.20:0,57,1831	0/0:11,0:11:32.47:0,32,977	0/0:34,0:33:96.27:0,96,2898	0/0:16,0:16:48.16:0,48,1538	0/0:34,0:34:99:0,99,2900	0/0:33,0:33:96.32:0,96,3031	0/0:39,0:39:99:0,117,3746	0/0:24,0:24:69.24:0,69,2229	0/0:22,0:22:66.20:0,66,1968	0/0:20,0:20:57.17:0,57,1646	0/0:16,0:16:47.65:0,48,1459	0/0:48,0:48:99:0,141,4453	0/0:20,0:20:60.21:0,60,1912	0/0:15,0:15:44.52:0,45,1345	0/0:28,0:28:78.27:0,78,2386	0/0:15,0:15:45.14:0,45,1358	0/0:16,0:16:48.16:0,48,1551	0/0:25,0:24:75.24:0,75,2325	0/0:12,0:12:36.12:0,36,1152
chr10	63013482	.	A	ACTAACTTTCTTTCTTTCTTT	28988.70	PASS	AB=0.818;AC=36;AF=0.643;AN=56;BaseQRankSum=0.128;DP=552;FS=0.788;HRun=0;HaplotypeScore=233.9187;InbreedingCoeff=0.6445;MQ=53.50;MQ0=1;MQRankSum=-5.497;QD=70.53;ReadPosRankSum=0.661;VQSLOD=4.4586;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:7,0:7:81.58:82,0,203	0/0:8,0:8:24.05:0,24,673	0/0:10,0:6:6.06:0,6,223	0/0:16,0:12:30.05:0,30,442	0/0:2,0:6:6.02:0,6,98	1/1:4,0:19:33.11:2100,33,0	1/1:23,0:23:63.21:2035,63,0	0/0:38,0:38:99:0,111,2517	0/0:20,0:20:60.21:0,60,2485	1/1:8,0:35:93.30:3339,93,0	1/1:5,0:22:51.17:1856,51,0	1/1:6,0:18:27.09:1700,27,0	1/1:2,0:23:15.05:950,15,0	1/1:6,0:21:18.06:908,18,0	1/1:4,0:21:18.06:1145,18,0	1/1:2,0:13:21.07:1188,21,0	0/0:33,0:33:99:0,99,3899	0/0:10,0:10:30.10:0,30,1178	1/1:4,0:23:68.36:1812,68,0	1/1:5,0:25:55.43:1807,55,0	1/1:15,0:14:33.10:770,33,0	0/1:8,0:15:99:557,0,113	0/1:9,0:17:99:497,0,317	0/1:28,0:31:99:955,0,486	1/1:4,0:16:12.04:763,12,0	1/1:7,21:32:86.10:4007,86,0	1/1:2,0:18:21.07:1336,21,0	1/1:14,0:14:42.14:1183,42,0
chr10	63014776	.	AT	A	1168.79	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.645;DP=501;FS=13.584;HRun=9;HaplotypeScore=49.0477;InbreedingCoeff=0.9604;MQ=68.20;MQ0=0;MQRankSum=1.046;QD=21.25;ReadPosRankSum=2.093;VQSLOD=3.3351;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,29:30:78.03:714,78,0	0/0:9,0:9:24.06:0,24,268	0/0:6,0:6:15.04:0,15,168	0/0:6,0:6:12.44:0,12,122	1/1:2,23:25:63.03:577,63,0	0/0:14,0:14:39.12:0,39,450	0/0:20,0:20:57.13:0,57,635	0/0:30,0:30:69.19:0,69,787	0/0:15,0:15:45.05:0,45,492	0/0:22,0:22:54.16:0,54,621	0/0:22,0:22:63.19:0,63,726	0/0:10,0:10:30.09:0,30,346	0/0:11,0:11:33.10:0,33,381	0/0:19,0:19:48.14:0,48,554	0/0:19,0:19:54.16:0,54,623	0/0:23,0:23:66.20:0,66,762	0/0:25,0:25:66.20:0,66,761	0/0:20,0:20:54.12:0,54,608	0/0:18,0:18:45.13:0,45,519	0/0:20,0:20:54.15:0,54,613	0/0:22,0:22:66.18:0,66,752	0/0:16,0:16:42.12:0,42,485	0/0:17,0:17:48.13:0,48,546	0/0:11,0:11:28.63:0,29,315	0/0:11,0:11:27.08:0,27,312	0/0:27,0:27:72.21:0,72,831	0/0:26,0:26:72.20:0,72,820	0/0:7,0:7:12.04:0,12,138
chr10	63015290	.	A	AT	1383.53	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-4.827;DP=527;FS=3.427;HRun=8;HaplotypeScore=53.5706;InbreedingCoeff=0.9431;MQ=70.38;MQ0=1;MQRankSum=-0.478;QD=22.31;ReadPosRankSum=-0.376;VQSLOD=3.7568;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:10,24:34:63.15:712,63,0	0/0:5,0:5:15.01:0,15,137	0/0:12,0:9:23.91:0,24,201	0/0:19,0:17:22.80:0,23,220	1/1:2,25:28:71.95:793,72,0	0/0:19,0:19:48.01:0,48,435	0/0:15,0:15:35.94:0,36,317	0/0:35,0:35:87.01:0,87,787	0/0:20,0:20:48.02:0,48,436	0/0:29,0:29:75:0,75,680	0/0:23,0:23:60:0,60,540	0/0:23,0:23:57.02:0,57,522	0/0:13,0:13:33.01:0,33,302	0/0:21,0:21:60.03:0,60,549	0/0:19,0:19:57.02:0,57,516	0/0:17,0:17:51:0,51,458	0/0:28,0:26:69.03:0,69,631	0/0:20,0:20:48.03:0,48,439	0/0:19,0:19:44.98:0,45,402	0/0:15,0:15:41.98:0,42,376	0/0:17,0:17:39.02:0,39,356	0/0:11,0:11:33.02:0,33,302	0/0:13,1:14:7.41:0,7,322	0/0:13,0:13:33:0,33,302	0/0:10,0:10:24.01:0,24,220	0/0:18,1:19:16.44:0,16,398	0/0:14,0:14:32.97:0,33,292	0/0:15,0:15:45.02:0,45,412
chr10	63015658	.	T	TAAAAAGAA	4295.23	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=2.373;DP=662;FS=12.862;HRun=0;HaplotypeScore=164.3481;InbreedingCoeff=0.8967;MQ=72.03;MQ0=0;MQRankSum=-9.661;QD=65.08;ReadPosRankSum=-2.463;VQSLOD=3.3990;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:16,17:35:69.24:2628,69,0	0/0:9,0:9:21.07:0,21,499	0/0:21,0:22:19.18:0,19,720	0/0:17,0:16:2.04:0,2,411	1/1:16,15:31:49.04:1667,49,0	0/0:17,0:17:36.11:0,36,887	0/0:27,0:27:69.24:0,69,1598	0/0:38,0:38:75.23:0,75,1701	0/0:17,0:17:39.10:0,39,867	0/0:28,0:28:60.19:0,60,1450	0/0:22,0:22:45.15:0,45,1114	0/0:28,0:28:69.23:0,69,1742	0/0:21,0:21:42.14:0,42,1056	0/0:21,0:21:57.18:0,57,1358	0/0:25,0:25:45.15:0,45,1088	0/0:32,0:32:72.20:0,72,1694	0/0:34,0:34:96.33:0,96,2334	0/0:19,0:19:40.15:0,40,1027	0/0:16,0:16:36.11:0,36,801	0/0:16,0:16:39.12:0,39,911	0/0:20,0:20:42.14:0,42,977	0/0:25,0:25:69.22:0,69,1592	0/0:24,0:24:66.17:0,66,1483	0/0:23,0:23:60.21:0,60,1467	0/0:25,0:25:63.22:0,63,1573	0/0:26,0:26:72.25:0,72,1768	0/0:35,0:35:57.17:0,57,1342	0/0:9,0:9:18.06:0,18,437
chr10	63016959	.	ATTAC	A	2094.84	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.114;DP=604;FS=4.040;HRun=0;HaplotypeScore=97.6373;InbreedingCoeff=0.9984;MQ=77.88;MQ0=1;MQRankSum=-3.585;QD=40.29;ReadPosRankSum=2.331;VQSLOD=3.7100;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,28:29:54.19:1078,54,0	0/0:8,0:8:24.08:0,24,671	0/0:26,0:26:72.19:0,72,1830	0/0:13,0:12:32.29:0,32,751	1/1:1,22:22:57.20:1138,57,0	0/0:24,0:24:72.25:0,72,1967	0/0:14,0:14:39.13:0,39,1091	0/0:25,0:25:72.24:0,72,1959	0/0:17,0:17:51.16:0,51,1322	0/0:33,0:33:99:0,99,2757	0/0:16,0:16:39.13:0,39,1090	0/0:24,0:24:72.25:0,72,2015	0/0:20,0:20:60.19:0,60,1618	0/0:16,0:16:48.16:0,48,1341	0/0:26,0:26:78.27:0,78,2183	0/0:33,0:32:99:0,99,2739	0/0:19,0:19:54.19:0,54,1511	0/0:20,0:20:60.21:0,60,1657	0/0:15,0:15:45.15:0,45,1256	0/0:24,0:24:66.23:0,66,1813	0/0:21,0:21:60.21:0,60,1679	0/0:30,0:30:84.29:0,84,2339	0/0:24,0:24:69.23:0,69,1838	0/0:11,0:11:30.10:0,30,804	0/0:16,0:16:48.16:0,48,1343	0/0:25,0:25:72.24:0,72,1959	0/0:31,0:31:93.32:0,93,2579	0/0:21,0:21:63.22:0,63,1762
chr10	63017343	.	T	TA	14962.65	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-12.588;DP=550;FS=1.554;HRun=1;HaplotypeScore=52.1752;InbreedingCoeff=0.9889;MQ=89.77;MQ0=0;MQRankSum=-4.947;QD=40.77;ReadPosRankSum=3.354;VQSLOD=5.3202;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:72.18:0,72,900	0/0:4,0:4:9.03:0,9,116	0/0:27,0:27:72.08:0,72,828	0/0:18,0:18:43.77:0,44,548	0/0:14,0:14:39.13:0,39,506	1/1:0,12:12:36.12:539,36,0	1/1:0,23:23:60.03:899,60,0	0/0:25,0:25:75.24:0,75,962	0/0:20,0:20:60.18:0,60,763	1/1:1,18:19:57.18:827,57,0	1/1:1,9:10:24.08:360,24,0	1/1:1,22:23:66.22:989,66,0	1/1:0,17:17:48.16:719,48,0	1/1:0,20:20:48.16:719,48,0	1/1:0,22:22:63.21:944,63,0	1/1:1,23:24:69.23:1034,69,0	0/0:34,0:34:93.30:0,93,1207	0/0:16,0:16:48.13:0,48,602	1/1:2,15:17:45.13:634,45,0	1/1:1,15:16:39.13:584,39,0	1/1:1,48:49:99:2068,138,0	1/1:0,23:23:63.21:944,63,0	1/1:1,6:7:18.06:270,18,0	1/1:0,22:22:57.03:826,57,0	1/1:1,16:17:42.14:629,42,0	1/1:2,15:17:51.17:763,51,0	1/1:1,20:21:57.19:853,57,0	1/1:0,8:8:24.08:360,24,0
chr10	63018663	.	G	GT	10034.63	PASS	AB=0.743;AC=42;AF=0.750;AN=56;BaseQRankSum=-7.327;DP=603;FS=18.068;HRun=10;HaplotypeScore=65.8591;InbreedingCoeff=0.7299;MQ=78.88;MQ0=0;MQRankSum=-0.888;QD=21.13;ReadPosRankSum=1.958;VQSLOD=3.9667;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,2:36:74.84:434,75,0	0/1:8,1:9:5.02:5,0,168	0/0:25,1:25:1.96:0,2,100	0/0:9,0:9:7.59:0,8,42	1/1:4,2:23:28.09:273,28,0	1/1:3,13:17:17.30:373,17,0	1/1:1,20:22:57.01:590,57,0	0/0:23,0:25:60.97:0,61,472	0/0:21,0:22:46.94:0,47,375	1/1:6,18:25:13.84:543,14,0	1/1:2,15:18:44.97:440,45,0	1/1:3,17:21:4.68:444,5,0	1/1:2,18:20:45.11:480,45,0	1/1:2,13:16:41.97:430,42,0	1/1:4,27:31:75.19:800,75,0	1/1:3,20:23:32.50:551,33,0	0/0:24,1:25:49.18:0,49,518	0/0:18,2:21:7.12:0,7,347	1/1:4,21:25:19.91:607,20,0	1/1:4,29:34:56.50:784,56,0	1/1:2,12:14:6.22:264,6,0	1/1:9,18:27:29.49:516,29,0	0/1:5,11:17:7.33:317,0,7	1/1:2,16:18:45.11:480,45,0	1/1:2,20:22:42.10:446,42,0	1/1:4,15:19:45.05:448,45,0	1/1:5,18:22:46.68:508,47,0	1/1:1,13:15:29.91:302,30,0
chr10	63023492	.	A	AT	2781.91	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-11.229;DP=629;FS=5.198;HRun=9;HaplotypeScore=60.4746;InbreedingCoeff=0.9959;MQ=74.34;MQ0=0;MQRankSum=-2.061;QD=23.98;ReadPosRankSum=-2.287;VQSLOD=3.7461;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:65.96:0,66,573	1/1:0,12:12:33.09:365,33,0	0/0:12,0:12:17.02:0,17,135	0/0:14,0:13:22.76:0,23,179	0/0:21,0:21:44.97:0,45,390	0/0:33,0:33:95.95:0,96,825	0/0:29,0:29:49.95:0,50,592	1/1:7,34:42:99:1125,105,0	1/1:5,14:19:36.10:398,36,0	0/0:30,0:30:74.97:0,75,650	0/0:21,0:21:53.97:0,54,467	0/0:20,0:20:56.93:0,57,491	0/0:29,0:29:68.94:0,69,595	0/0:18,0:18:50.97:0,51,439	0/0:26,0:26:68.94:0,69,590	0/0:23,0:23:56.96:0,57,491	1/1:4,28:32:55.17:837,55,0	1/1:1,10:11:21.06:232,21,0	0/0:20,0:20:50.35:0,50,425	0/0:25,0:25:68.97:0,69,595	0/0:15,0:15:32.96:0,33,280	0/0:19,0:19:50.98:0,51,443	0/0:26,0:26:71.97:0,72,625	0/0:16,0:16:44.99:0,45,391	0/0:18,0:18:47.99:0,48,417	0/0:29,0:29:74.96:0,75,649	0/0:20,0:20:59.99:0,60,521	0/0:22,0:22:53.99:0,54,468
chr10	63024016	.	GTTT	G	1103.07	PASS	AB=0.795;AC=12;AF=0.214;AN=56;BaseQRankSum=4.761;DP=535;FS=5.423;HRun=18;HaplotypeScore=90.6694;InbreedingCoeff=0.7656;MQ=68.12;MQ0=1;MQRankSum=-0.325;QD=9.43;ReadPosRankSum=6.360;VQSLOD=-0.1640;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,16:22:38.51:371,39,0	0/0:4,0:9:6.46:0,6,35	0/0:17,0:8:20.89:0,21,180	0/1:15,0:9:8.79:9,0,13	1/1:13,13:28:32.39:316,32,0	0/0:22,0:25:58.88:0,59,689	0/0:13,0:13:33.10:0,33,505	0/0:19,1:26:4.16:0,4,204	0/0:10,0:17:34.32:0,34,243	0/0:22,1:26:22.81:0,23,536	0/0:19,0:21:40.33:0,40,528	0/0:17,0:17:35.10:0,35,466	0/0:11,0:11:24:0,24,305	0/0:14,0:18:43.24:0,43,489	0/0:15,0:19:43.31:0,43,502	0/0:22,0:23:56.99:0,57,751	0/0:6,0:17:9.19:0,9,21	0/1:4,0:13:5.66:6,0,8	0/0:17,0:20:39.01:0,39,436	0/0:25,0:28:61.08:0,61,729	0/0:6,0:6:13.29:0,13,186	1/1:4,7:13:13.47:198,13,0	1/1:6,9:15:15.94:174,16,0	1/1:4,7:11:21.01:205,21,0	0/0:22,0:25:66.65:0,67,752	0/0:24,0:26:51.04:0,51,611	0/0:41,0:44:97.51:0,98,1208	0/0:7,0:8:21.04:0,21,290
chr10	63024904	.	T	TA	7816.50	PASS	AB=0.703;AC=48;AF=0.857;AN=56;BaseQRankSum=-6.347;DP=611;FS=8.977;HRun=13;HaplotypeScore=68.8914;InbreedingCoeff=0.0107;MQ=72.76;MQ0=0;MQRankSum=-1.101;QD=12.79;ReadPosRankSum=2.689;VQSLOD=4.7181;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,29:33:33.47:449,33,0	0/1:4,5:9:23.14:93,0,23	0/1:19,0:18:6.24:6,0,48	0/1:20,0:17:0.35:0,0,58	0/1:11,21:33:1.33:414,0,1	1/1:2,7:10:20.86:182,21,0	1/1:2,14:16:30.03:279,30,0	1/1:5,21:28:66.98:555,67,0	1/1:7,13:21:10.74:265,11,0	1/1:7,16:23:22.70:343,23,0	1/1:5,9:16:32.71:279,33,0	1/1:2,20:22:45.05:418,45,0	1/1:5,13:18:24.03:223,24,0	1/1:8,16:25:13.46:293,13,0	0/1:11,23:34:11.22:313,0,11	1/1:8,16:24:25.67:364,26,0	1/1:5,15:20:36.04:334,36,0	1/1:3,18:21:30.03:279,30,0	0/1:12,16:28:1.94:383,0,2	1/1:7,14:21:29.99:270,30,0	1/1:6,8:16:3.12:148,3,0	0/1:5,7:12:19.69:131,0,20	1/1:12,15:28:2.93:232,3,0	0/1:4,13:17:5.12:243,0,5	1/1:8,9:18:20.86:181,21,0	1/1:5,16:21:28.81:359,29,0	1/1:14,25:40:45.32:547,45,0	1/1:6,9:15:11.41:232,11,0
chr10	63025857	.	G	GCACACA	12741.20	PASS	AB=0.659;AC=36;AF=0.643;AN=56;BaseQRankSum=-3.154;DP=609;FS=13.388;HRun=0;HaplotypeScore=150.2009;InbreedingCoeff=0.7475;MQ=60.02;MQ0=9;MQRankSum=-8.140;QD=30.55;ReadPosRankSum=-1.941;VQSLOD=3.3095;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:35:23.87:0,24,1118	0/0:8,0:9:21.07:0,21,414	0/0:17,0:10:8.96:0,9,120	0/0:28,0:20:5.58:0,6,46	0/0:10,0:12:21.07:0,21,394	1/1:12,4:22:17.57:464,18,0	1/1:12,7:18:15.05:446,15,0	0/0:15,0:15:21.07:0,21,399	0/0:18,0:19:36.12:0,36,704	1/1:13,9:26:53.20:1202,53,0	1/1:6,1:12:12.04:239,12,0	1/1:9,15:28:44.34:1273,44,0	1/1:11,9:26:38.34:1088,38,0	1/1:16,11:30:45.10:1347,45,0	1/1:10,10:24:28.24:795,28,0	0/1:12,12:30:18.15:1192,0,18	0/0:25,0:30:43.86:0,44,711	0/0:20,0:23:44.54:0,45,854	1/1:21,0:19:12.04:254,12,0	1/1:11,10:21:27.09:819,27,0	1/1:16,4:22:2.76:97,3,0	1/1:6,0:10:3.01:78,3,0	1/1:8,0:14:5.97:116,6,0	1/1:12,0:15:9.03:235,9,0	1/1:12,12:28:17.89:527,18,0	0/1:15,10:26:4.95:1014,0,5	1/1:12,10:25:36.12:1044,36,0	1/1:6,2:11:21.06:509,21,0
chr10	63027854	.	C	CTAACAGGCCCTGTTTCAAAA	130369.73	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-6.240;DP=760;FS=14.474;HRun=0;HaplotypeScore=341.4846;InbreedingCoeff=0.9762;MQ=64.83;MQ0=0;MQRankSum=-11.462;QD=185.98;ReadPosRankSum=5.647;VQSLOD=3.6078;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:31,10:48:99:8936,111,0	1/1:5,2:8:15.05:1240,15,0	0/0:30,0:31:78.20:0,78,3012	0/0:28,0:26:64.93:0,65,2325	1/1:28,2:34:81.28:4696,81,0	1/1:14,5:21:54.19:4217,54,0	1/1:28,3:34:93.32:6758,93,0	1/1:39,0:39:99:6873,114,0	1/1:24,5:32:81.28:5976,81,0	1/1:17,5:26:72.24:4768,72,0	1/1:17,6:24:63.22:4868,63,0	1/1:27,4:32:90.31:7023,90,0	1/1:13,6:21:54.13:4452,54,0	1/1:12,9:24:63.22:5101,63,0	1/1:26,5:33:84.29:6228,84,0	1/1:26,12:42:99:8688,108,0	1/1:21,0:21:48.16:2892,48,0	1/1:7,4:17:30.10:2547,30,0	1/1:10,4:18:48.16:3007,48,0	1/1:16,12:32:87.30:6545,87,0	1/1:15,4:27:42.10:2967,42,0	1/1:20,7:29:78.22:5316,78,0	1/1:17,3:24:57.20:3595,57,0	1/1:14,4:20:45.15:3562,45,0	1/1:21,8:34:84.29:7267,84,0	1/1:19,5:25:75.26:5556,75,0	1/1:19,9:29:81.28:6270,81,0	1/1:3,1:6:12.04:1020,12,0
chr10	63028017	.	TCTC	T	20387.35	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=16.428;DP=754;FS=3.812;HRun=0;HaplotypeScore=147.3221;InbreedingCoeff=0.9992;MQ=85.20;MQ0=0;MQRankSum=-5.003;QD=41.10;ReadPosRankSum=4.543;VQSLOD=6.1261;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:60,0:60:99:0,166,3779	0/0:19,0:19:57.17:0,57,1265	0/0:31,0:31:78.24:0,78,1674	0/0:25,0:25:69.20:0,69,1469	0/0:31,0:31:90.21:0,90,1915	1/1:2,28:30:69.20:1144,69,0	1/1:1,31:32:81.23:1335,81,0	0/0:27,0:27:69.22:0,69,1465	0/0:22,0:22:63.22:0,63,1427	1/1:0,26:26:78.27:1316,78,0	1/1:0,18:18:42.10:684,42,0	1/1:1,25:26:69.24:1172,69,0	1/1:1,37:38:99:1686,99,0	1/1:0,30:30:81.28:1377,81,0	1/1:0,28:28:69.24:1174,69,0	1/1:0,31:31:84.23:1398,84,0	0/0:36,0:36:99:0,102,2288	0/0:7,0:7:21.07:0,21,484	1/1:0,20:20:54.13:839,54,0	1/1:2,26:28:69.02:1019,69,0	1/1:6,36:42:99:1742,111,0	1/1:0,28:28:57.15:940,57,0	1/1:2,18:20:33.04:530,33,0	1/1:0,25:25:60.21:1023,60,0	1/1:0,14:14:33.07:530,33,0	1/1:4,18:22:48.15:792,48,0	1/1:2,24:26:69.24:1175,69,0	1/1:0,12:12:30.10:511,30,0
chr10	63029323	.	G	GTT	2591.73	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=2.632;DP=620;FS=2.454;HRun=0;HaplotypeScore=117.1902;InbreedingCoeff=0.9918;MQ=81.68;MQ0=0;MQRankSum=-5.429;QD=41.14;ReadPosRankSum=2.239;VQSLOD=5.4423;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,33:35:87.25:1490,87,0	0/0:5,0:5:15.05:0,15,245	0/0:22,0:22:55.93:0,56,914	0/0:24,0:23:59.31:0,59,826	1/1:1,27:25:72.20:1224,72,0	0/0:17,0:17:51.16:0,51,803	0/0:18,0:18:48.16:0,48,753	0/0:30,0:30:90.27:0,90,1393	0/0:13,0:13:39.12:0,39,601	0/0:24,0:24:72.24:0,72,1150	0/0:25,0:25:75.19:0,75,1110	0/0:16,0:16:45.15:0,45,723	0/0:22,0:22:66.21:0,66,1036	0/0:18,0:18:54.18:0,54,878	0/0:16,0:16:48.16:0,48,770	0/0:19,0:19:57.16:0,57,879	0/0:29,0:29:87.30:0,87,1419	0/0:21,0:21:63.21:0,63,997	0/0:21,0:21:63.22:0,63,1024	0/0:29,0:29:78.27:0,78,1259	0/0:20,0:20:60.18:0,60,931	0/0:21,0:21:57.18:0,57,888	0/0:28,0:28:80.46:0,80,1228	0/0:26,0:26:78.25:0,78,1237	0/0:15,0:15:45.14:0,45,691	0/0:30,0:30:87.30:0,87,1402	0/0:29,0:29:87.29:0,87,1388	0/0:19,0:19:57.17:0,57,873
chr10	63029589	.	GAC	G	1204.29	PASS	AB=0.941;AC=41;AF=0.732;AN=56;BaseQRankSum=2.196;DP=505;FS=9.876;HRun=0;HaplotypeScore=87.3917;InbreedingCoeff=0.1714;MQ=74.95;MQ0=35;MQRankSum=1.016;QD=3.09;ReadPosRankSum=0.053;VQSLOD=1.3095;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:35,0:33:18.14:18,0,349	1/1:8,0:7:3.08:7,3,0	0/0:33,0:25:1.20:0,1,3	0/0:29,0:18:3.01:0,3,38	0/1:15,0:13:20.63:21,0,116	0/1:11,8:17:16.67:17,0,57	1/1:10,9:19:11.37:76,11,0	1/1:17,0:21:0.43:1,0,0	1/1:15,0:15:12.93:49,13,0	1/1:10,12:21:33.82:267,34,0	1/1:5,3:8:8.36:47,8,0	1/1:13,5:17:2.97:20,3,0	0/1:24,0:23:12.84:13,0,177	1/1:24,0:22:12.18:93,12,0	1/1:10,2:12:10.81:68,11,0	1/1:5,6:11:5.88:48,6,0	1/1:22,0:20:8.46:25,8,0	1/1:15,0:14:7.85:18,8,0	1/1:6,0:6:3.01:33,3,0	1/1:7,0:11:2.99:25,3,0	0/1:27,0:25:5.88:119,0,6	0/0:16,0:15:2.96:0,3,24	0/0:19,0:19:2.84:0,3,9	0/0:18,0:14:0.47:0,0,1	1/1:10,6:16:5.65:28,6,0	1/1:5,11:16:12.69:256,13,0	1/1:3,10:12:10.01:59,10,0	1/1:12,0:8:3.01:33,3,0
chr10	63031379	.	G	GGTTTTGTTTT	4704.21	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=3.393;DP=648;FS=1.930;HRun=0;HaplotypeScore=188.9135;InbreedingCoeff=0.8650;MQ=68.49;MQ0=3;MQRankSum=-8.980;QD=34.09;ReadPosRankSum=-1.381;VQSLOD=4.5016;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:16:21.96:475,22,0	0/0:7,0:7:15.05:0,15,458	0/0:29,0:19:13.65:0,14,304	0/1:47,0:24:27.79:28,0,490	1/1:13,0:13:24.08:513,24,0	0/0:28,0:28:68.81:0,69,2174	0/0:25,0:25:39.04:0,39,860	0/0:41,0:41:48.14:0,48,1219	0/0:16,0:16:12.19:0,12,789	0/0:27,0:26:57.18:0,57,1597	0/0:23,0:23:60.21:0,60,1725	0/0:19,0:19:36.11:0,36,1026	0/0:12,0:12:21.07:0,21,622	0/0:20,0:20:48.13:0,48,1241	0/0:21,0:21:39.11:0,39,1058	0/0:26,0:26:63.19:0,63,1720	0/0:33,0:33:84.23:0,84,2285	0/0:12,0:12:30.10:0,30,857	0/0:27,0:26:51.13:0,51,1231	0/0:33,0:33:33.48:0,33,1696	0/0:21,0:21:45.14:0,45,1240	1/1:5,15:25:40.29:1707,40,0	1/1:3,13:22:27.09:1359,27,0	1/1:5,6:15:15:623,15,0	0/0:15,0:15:18.05:0,18,483	0/0:26,0:26:72.22:0,72,1986	0/0:30,0:30:63.18:0,63,1744	0/0:19,0:18:21.07:0,21,641
chr10	63031395	.	G	GTTTTGTT	4295.38	PASS	AB=0.899;AC=6;AF=0.107;AN=56;BaseQRankSum=9.121;DP=626;FS=23.856;HRun=0;HaplotypeScore=147.6564;InbreedingCoeff=0.2468;MQ=63.79;MQ0=2;MQRankSum=-10.165;QD=38.35;ReadPosRankSum=-0.563;VQSLOD=2.9457;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:7,13:21:11.85:995,0,12	0/0:5,0:5:15.05:0,15,385	0/0:29,0:19:29.74:0,30,587	0/0:41,0:29:28.40:0,28,960	1/1:5,11:19:45.09:1309,45,0	0/0:30,0:30:90.28:0,90,2081	0/0:19,0:19:51.16:0,51,1042	0/0:32,0:32:69.23:0,69,1458	0/0:16,0:16:47.78:0,48,946	0/0:24,0:24:72.24:0,72,1642	0/0:23,0:23:69.24:0,69,1624	0/0:22,0:22:59.76:0,60,1168	0/0:10,0:10:30.10:0,30,657	0/0:19,0:19:57.18:0,57,1273	0/0:22,0:22:60.19:0,60,1240	0/0:29,0:29:78.26:0,78,1770	0/0:34,0:35:99:0,99,2280	0/0:14,0:14:4.39:0,4,798	0/0:28,0:26:69.20:0,69,1418	0/0:26,0:26:66.01:0,66,1554	0/0:18,0:18:51.17:0,51,1203	0/1:28,0:28:99:942,0,200	0/1:26,0:26:99:821,0,195	0/1:17,0:17:99:229,0,169	0/0:9,0:9:18.06:0,18,449	0/0:28,0:28:81.27:0,81,1922	0/0:24,0:24:63.20:0,63,1536	0/0:10,0:10:24.04:0,24,558
chr10	63031868	.	TTATAGAGA	T	2580.09	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.308;DP=764;FS=2.285;HRun=0;HaplotypeScore=184.2353;InbreedingCoeff=0.9953;MQ=90.15;MQ0=0;MQRankSum=-8.998;QD=53.75;ReadPosRankSum=0.674;VQSLOD=3.6926;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,24:26:42.14:1216,42,0	0/0:9,0:9:27.09:0,27,1152	0/0:33,0:33:99:0,99,4054	0/0:26,0:26:72.21:0,72,2659	1/1:0,22:22:54.19:1486,54,0	0/0:28,0:28:81.28:0,81,3496	0/0:23,0:23:69.24:0,69,3049	0/0:35,0:35:99:0,105,4094	0/0:35,0:35:99:0,105,4489	0/0:21,0:21:63.22:0,63,2736	0/0:20,0:20:60.21:0,60,2523	0/0:29,0:29:84.29:0,84,3694	0/0:36,0:36:99:0,105,4281	0/0:37,0:37:99:0,108,4757	0/0:34,0:34:99:0,102,4045	0/0:32,0:32:93.32:0,93,4006	0/0:33,0:33:99:0,99,4395	0/0:25,0:25:75.26:0,75,3083	0/0:25,0:25:75.26:0,75,3216	0/0:27,0:27:81.28:0,81,3473	0/0:47,0:47:99:0,135,5942	0/0:36,0:36:99:0,105,4512	0/0:16,0:16:45.14:0,45,1928	0/0:21,0:21:63.22:0,63,2818	0/0:12,0:12:36.10:0,36,1454	0/0:28,0:28:81.28:0,81,3542	0/0:41,0:41:99:0,117,5076	0/0:7,0:7:18.06:0,18,815
chr10	63032315	.	ATT	A	1249.97	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.359;DP=509;FS=11.080;HRun=10;HaplotypeScore=64.3622;InbreedingCoeff=0.8636;MQ=71.32;MQ0=2;MQRankSum=2.517;QD=21.55;ReadPosRankSum=1.351;VQSLOD=1.6774;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,23:27:54.13:602,54,0	0/0:9,0:9:27.09:0,27,429	0/0:20,0:15:5.50:0,5,316	0/0:18,0:13:14:0,14,150	1/1:4,27:30:69.16:769,69,0	0/0:21,0:22:59.66:0,60,887	0/0:12,0:12:30.08:0,30,431	0/0:24,0:24:63.21:0,63,1000	0/0:10,0:10:27.09:0,27,429	0/0:31,0:31:87.29:0,87,1357	0/0:18,0:20:54.16:0,54,814	0/0:17,0:17:45.15:0,45,713	0/0:12,0:12:33.11:0,33,524	0/0:10,0:10:24.08:0,24,381	0/0:6,0:6:15.05:0,15,237	0/0:23,0:23:57.19:0,57,883	0/0:20,0:21:54.18:0,54,838	0/0:15,0:15:42.09:0,42,615	0/0:29,0:30:71.73:0,72,1093	0/0:20,0:20:57.19:0,57,900	0/0:10,0:10:21.05:0,21,304	0/0:9,0:9:21.07:0,21,325	0/0:2,0:2:6.01:0,6,72	0/0:4,0:4:12.04:0,12,184	0/0:19,0:19:51.13:0,51,776	0/0:33,0:33:90.31:0,90,1426	0/0:33,0:33:93.30:0,93,1454	0/0:20,0:20:48.12:0,48,707
chr10	63033782	.	GGAAAA	G	812.67	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=-0.675;DP=467;FS=1.765;HRun=0;HaplotypeScore=99.3823;InbreedingCoeff=0.6775;MQ=53.34;MQ0=24;MQRankSum=-0.936;QD=14.01;ReadPosRankSum=3.335;VQSLOD=2.4899;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,26:27:41.63:839,42,0	0/0:3,0:3:5.98:0,6,85	0/0:20,0:3:7.84:0,8,154	0/0:15,0:5:7.32:0,7,29	1/1:0,14:16:9.76:83,10,0	0/0:13,0:13:27:0,27,382	0/0:21,0:18:48.01:0,48,702	0/0:20,0:18:50.89:0,51,732	0/0:16,0:15:30:0,30,387	0/0:13,0:13:35.96:0,36,420	0/0:17,0:17:43.15:0,43,507	0/0:21,0:20:47.90:0,48,619	0/0:17,0:17:36.84:0,37,476	0/0:17,0:15:20.97:0,21,266	0/1:15,0:13:12.97:13,0,327	0/0:11,0:11:30:0,30,396	0/0:24,0:21:24.38:0,24,686	0/0:20,0:20:42.81:0,43,646	0/0:16,0:15:45.03:0,45,605	0/0:14,0:14:41.28:0,41,542	0/0:16,0:16:36.55:0,37,410	0/0:12,0:10:27.02:0,27,333	0/0:14,0:13:30.07:0,30,411	0/0:22,0:21:37.61:0,38,539	0/0:19,0:19:50.42:0,50,590	0/0:20,0:19:56.88:0,57,716	0/0:10,0:10:30.04:0,30,442	0/0:15,0:12:30.05:0,30,444
chr10	63042188	.	T	TA	1221.59	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=4.085;DP=625;FS=4.960;HRun=7;HaplotypeScore=65.4397;InbreedingCoeff=0.9889;MQ=57.45;MQ0=4;MQRankSum=-3.857;QD=20.36;ReadPosRankSum=-1.069;VQSLOD=2.9470;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:1,25:20:45.10:528,45,0	0/0:10,0:10:30.05:0,30,290	0/0:15,0:14:31.79:0,32,261	0/0:9,0:8:15.17:0,15,169	1/1:3,31:25:69.17:815,69,0	0/0:18,0:18:39.06:0,39,376	0/0:16,0:15:39.06:0,39,377	0/0:31,0:30:84.10:0,84,798	0/0:23,0:23:66.10:0,66,637	0/0:35,0:35:99:0,102,984	0/0:19,0:19:51.08:0,51,492	0/0:22,0:22:63.10:0,63,608	0/0:22,0:22:48.05:0,48,456	0/0:21,0:21:57.07:0,57,543	0/0:22,0:22:63.09:0,63,602	0/0:20,0:20:54.08:0,54,521	0/0:24,0:24:66.04:0,66,622	0/0:26,0:25:69.08:0,69,657	0/0:40,0:40:99:0,102,980	0/0:26,0:26:69.10:0,69,662	0/0:22,0:22:54.01:0,54,500	0/0:27,0:27:72.10:0,72,695	0/0:9,0:9:21.03:0,21,202	0/0:9,0:9:27.04:0,27,261	0/0:35,0:35:84.13:0,84,811	0/0:22,0:22:54.08:0,54,521	0/0:29,0:29:78.12:0,78,753	0/0:13,0:13:33.04:0,33,319
chr10	63043007	.	TC	T	2505.72	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=12.688;DP=739;FS=15.114;HRun=1;HaplotypeScore=72.3901;InbreedingCoeff=0.9974;MQ=60.19;MQ0=0;MQRankSum=0.713;QD=32.54;ReadPosRankSum=-1.517;VQSLOD=1.7583;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:57:99:0,169,2683	1/1:0,7:7:18.06:233,18,0	0/0:24,0:9:27.09:0,27,412	0/0:22,0:14:42.11:0,42,625	0/0:28,0:28:81.28:0,81,1287	0/0:24,0:23:69.24:0,69,1097	0/0:23,0:23:66.21:0,66,1030	1/1:1,32:33:96.24:1225,96,0	0/0:37,0:37:99:0,105,1670	0/0:29,0:29:87.29:0,87,1358	0/0:21,0:21:60.20:0,60,959	0/0:19,0:19:54.17:0,54,840	0/0:26,0:26:78.23:0,78,1183	0/0:24,0:24:72.25:0,72,1150	0/0:24,0:24:69.22:0,69,1079	0/0:36,0:36:99:0,108,1676	1/1:0,16:16:42.14:545,42,0	1/1:1,20:21:51.17:662,51,0	0/0:16,0:16:48.16:0,48,767	0/0:30,0:30:90.31:0,90,1433	0/0:35,0:35:99:0,99,1580	0/0:20,0:20:60.19:0,60,936	0/0:24,0:24:57.19:0,57,909	0/0:34,0:33:99:0,99,1495	0/0:28,0:28:78.26:0,78,1219	0/0:33,0:33:96.31:0,96,1491	0/0:32,0:32:96.33:0,96,1530	0/0:16,0:16:45.15:0,45,718
chr10	63043802	.	ATG	A	1583.49	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.435;DP=602;FS=3.882;HRun=0;HaplotypeScore=85.0387;InbreedingCoeff=0.9458;MQ=66.79;MQ0=0;MQRankSum=-2.803;QD=34.42;ReadPosRankSum=-0.769;VQSLOD=5.7124;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,29:31:81.27:1175,81,0	0/0:11,0:11:33.10:0,33,586	0/0:6,0:5:15.04:0,15,241	0/0:8,0:8:21.07:0,21,382	1/1:0,14:15:36.12:530,36,0	0/0:17,0:17:51.14:0,51,851	0/0:34,0:34:96.33:0,96,1775	0/0:38,0:37:99:0,108,1984	0/0:21,0:21:63.20:0,63,1139	0/0:23,0:23:69.24:0,69,1288	0/0:4,0:4:12.04:0,12,224	0/0:15,0:15:42.13:0,42,754	0/0:26,0:26:75.26:0,75,1398	0/0:30,0:30:84.23:0,84,1494	0/0:28,0:28:84.29:0,84,1573	0/0:18,0:18:54.19:0,54,1002	0/0:30,0:30:81.28:0,81,1517	0/0:24,0:24:66.23:0,66,1236	0/0:18,0:18:48.16:0,48,899	0/0:36,0:36:99:0,108,1990	0/0:43,0:43:99:0,126,2326	0/0:15,0:15:45.15:0,45,818	0/0:20,0:20:54.19:0,54,1006	0/0:41,0:41:99:0,123,2303	0/0:16,0:16:36.11:0,36,636	0/0:21,0:21:60.21:0,60,1113	0/0:10,0:10:27.09:0,27,505	0/0:3,0:3:9.03:0,9,166
chr10	63044256	.	GA	G	1583.69	PASS	AB=0.799;AC=27;AF=0.482;AN=56;BaseQRankSum=-1.315;DP=468;FS=38.867;HRun=16;HaplotypeScore=56.9353;InbreedingCoeff=0.0077;MQ=62.77;MQ0=6;MQRankSum=0.909;QD=4.33;ReadPosRankSum=1.593;VQSLOD=-0.6255;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:24,11:37:7.85:249,0,8	0/0:2,0:6:6.93:0,7,31	0/1:33,0:13:14.16:14,0,50	0/1:18,0:6:18.68:19,0,20	1/1:11,13:26:15.84:172,16,0	0/1:4,5:11:9.39:50,0,9	0/1:6,6:13:21.77:103,0,22	0/0:9,0:13:14:0,14,71	0/0:15,0:14:17.88:0,18,136	0/1:11,8:20:5.37:76,0,5	1/1:10,11:23:1.01:109,1,0	0/1:15,2:16:11.54:46,0,12	0/1:15,0:15:20.34:20,0,34	1/1:14,0:13:16.34:93,16,0	1/1:7,11:18:26.38:161,26,0	1/1:10,4:15:1.31:96,1,0	0/0:8,0:21:22.92:0,23,127	0/0:5,0:14:23:0,23,129	0/1:13,5:17:31.54:85,0,32	0/1:11,4:15:47.43:47,0,74	1/1:5,3:8:5.70:36,6,0	0/0:4,0:5:7.04:0,7,36	0/0:6,0:16:11.98:0,12,66	0/0:4,0:9:5.84:0,6,40	0/1:7,8:15:8.90:57,0,9	0/1:12,2:15:4.86:61,0,5	0/1:12,5:17:16.29:93,0,16	1/1:8,9:16:10.29:172,10,0
chr10	63044758	.	TA	T	1293.33	PASS	AB=0.811;AC=6;AF=0.107;AN=56;BaseQRankSum=8.078;DP=668;FS=2.055;HRun=12;HaplotypeScore=74.9468;InbreedingCoeff=0.6230;MQ=62.21;MQ0=3;MQRankSum=-0.145;QD=12.93;ReadPosRankSum=1.586;VQSLOD=3.9910;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,38:43:99:834,108,0	0/1:8,2:10:16.45:16,0,198	0/0:7,0:6:15:0,15,143	0/0:14,0:13:19.94:0,20,239	1/1:3,28:31:68.70:534,69,0	0/0:18,0:19:47.93:0,48,471	0/0:30,1:31:45.83:0,46,626	0/0:37,1:37:63.61:0,64,763	0/0:24,1:24:30.86:0,31,489	0/0:30,1:30:42.89:0,43,611	0/0:18,0:19:47.74:0,48,443	0/0:21,0:22:44.89:0,45,431	0/0:16,0:17:42:0,42,405	0/0:21,0:20:41.99:0,42,398	0/0:25,0:25:48.10:0,48,487	0/0:18,0:18:39.08:0,39,396	0/0:29,0:30:68.97:0,69,684	0/0:23,1:24:42.89:0,43,615	0/1:10,4:15:45.33:45,0,160	0/0:20,1:21:30.87:0,31,494	0/0:16,0:16:45.08:0,45,451	0/0:23,1:24:39.88:0,40,578	0/0:21,2:23:45.08:0,45,455	0/0:23,0:23:65.99:0,66,634	0/0:30,0:32:83.99:0,84,826	0/0:31,2:34:21.61:0,22,591	0/0:34,0:34:51.06:0,51,634	0/0:19,0:19:36.04:0,36,357
chr10	63046760	.	TTAGA	T	3013.55	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=11.231;DP=647;FS=0.000;HRun=0;HaplotypeScore=99.2597;InbreedingCoeff=0.9946;MQ=73.11;MQ0=0;MQRankSum=-3.470;QD=40.18;ReadPosRankSum=-3.104;VQSLOD=3.1479;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:81.26:0,81,1993	1/1:1,7:8:14.97:245,15,0	0/0:18,0:18:51.04:0,51,1196	0/0:11,0:11:24.03:0,24,523	0/0:36,0:36:99:0,102,2606	0/0:34,0:34:99:0,102,2599	0/0:21,0:21:57.13:0,57,1420	1/1:1,35:36:99:1789,105,0	0/0:31,0:31:90.31:0,90,2418	0/0:17,0:17:51.18:0,51,1352	0/0:21,0:21:57.18:0,57,1483	0/0:17,0:17:48.16:0,48,1296	0/0:22,0:22:66.21:0,66,1723	0/0:17,0:17:51.18:0,51,1346	0/0:27,0:27:81.28:0,81,2148	0/0:22,0:22:66.21:0,66,1665	1/1:1,14:15:30.10:569,30,0	1/1:1,15:16:30.10:569,30,0	0/0:27,0:27:78.26:0,78,1978	0/0:26,0:26:78.27:0,78,2104	0/0:34,0:34:96.33:0,96,2557	0/0:20,0:20:60.21:0,60,1617	0/0:23,0:23:69.22:0,69,1798	0/0:13,0:13:39.13:0,39,1043	0/0:23,0:23:69.22:0,69,1799	0/0:40,0:40:99:0,117,3106	0/0:33,0:33:99:0,99,2534	0/0:12,0:12:36.12:0,36,960
chr10	63048330	.	A	AAC	11888.57	PASS	AB=1.000;AC=40;AF=0.714;AN=56;BaseQRankSum=-1.603;DP=637;FS=8.165;HRun=0;HaplotypeScore=114.2118;InbreedingCoeff=0.8231;MQ=65.65;MQ0=2;MQRankSum=-3.135;QD=24.56;ReadPosRankSum=1.225;VQSLOD=5.7705;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:27:6.31:55,0,6	0/0:13,0:13:33.09:0,33,399	0/0:19,0:17:21.03:0,21,308	0/0:22,0:15:14.31:0,14,255	0/1:31,0:31:19.26:127,0,19	1/1:11,10:23:10.64:696,11,0	1/1:2,19:22:33.11:544,33,0	0/0:29,0:29:63.19:0,63,777	0/0:23,0:23:30.07:0,30,348	1/1:5,18:24:57.19:901,57,0	1/1:5,15:20:26.98:413,27,0	1/1:12,12:24:52.70:812,53,0	1/1:8,16:23:27.09:445,27,0	1/1:6,17:22:30.10:494,30,0	1/1:5,16:21:30.10:494,30,0	1/1:3,14:17:21.07:343,21,0	0/0:24,0:24:63.19:0,63,774	0/0:23,0:23:63.20:0,63,786	1/1:20,1:21:42.12:617,42,0	1/1:13,13:26:57.19:932,57,0	1/1:6,17:23:27.09:445,27,0	1/1:0,20:20:33.11:545,33,0	1/1:2,18:20:17.68:296,18,0	1/1:8,23:31:45.15:743,45,0	1/1:9,10:19:48.15:761,48,0	1/1:15,14:29:39.14:1125,39,0	1/1:20,12:33:57.19:928,57,0	1/1:3,3:6:12.01:171,12,0
chr10	63048344	.	TAC	T	191.50	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-2.579;DP=605;FS=1.427;HRun=0;HaplotypeScore=155.6657;InbreedingCoeff=0.9363;MQ=57.45;MQ0=3;MQRankSum=0.938;QD=10.64;ReadPosRankSum=1.614;VQSLOD=3.6909;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:31:12.26:0,12,102	0/0:12,0:12:33.04:0,33,417	0/0:13,0:10:18:0,18,189	0/0:19,0:10:14.86:0,15,135	0/0:34,0:34:20.86:0,21,203	0/0:20,0:19:48.09:0,48,668	0/0:24,0:24:42.05:0,42,570	0/0:31,0:31:79.06:0,79,1056	1/1:2,16:18:21.07:284,21,0	0/0:24,0:24:64.69:0,65,849	0/0:17,0:18:36.09:0,36,508	0/0:22,0:22:51:0,51,656	0/0:23,0:22:42.11:0,42,583	0/0:18,0:17:30.06:0,30,399	0/0:18,0:18:36.09:0,36,511	0/0:18,0:17:27.90:0,28,310	0/0:23,0:23:69.22:0,69,1103	0/0:23,0:23:60.08:0,60,849	0/0:18,0:18:46.18:0,46,540	0/0:25,0:25:57.15:0,57,801	0/0:24,0:24:37.62:0,38,511	0/0:19,0:19:36.04:0,36,450	0/0:19,0:19:22.80:0,23,335	0/0:27,0:27:54.10:0,54,757	0/0:19,0:19:41.24:0,41,570	0/0:27,0:27:66.60:0,67,916	0/0:27,0:27:61.34:0,61,794	0/0:10,0:10:30.09:0,30,445
chr10	63048363	.	G	GCA	6485.24	PASS	AB=0.816;AC=31;AF=0.574;AN=54;BaseQRankSum=1.845;DP=571;FS=3.188;HRun=0;HaplotypeScore=119.7576;InbreedingCoeff=0.5846;MQ=53.62;MQ0=7;MQRankSum=-1.705;QD=16.80;ReadPosRankSum=0.790;VQSLOD=4.6874;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:32:13.56:18,0,14	0/0:8,0:8:18.02:0,18,190	./.	0/0:13,0:3:2.96:0,3,19	0/1:32,0:32:23.30:104,0,23	1/1:7,13:19:30.05:404,30,0	1/1:17,3:20:6.18:268,6,0	0/0:39,0:38:83.39:0,83,737	0/0:14,0:14:24.06:0,24,262	1/1:16,4:20:9.27:467,9,0	1/1:18,4:22:4.35:395,4,0	0/1:9,13:23:0.59:263,0,1	1/1:16,3:18:39.03:462,39,0	1/1:9,4:12:27.02:333,27,0	1/1:11,2:13:33.02:383,33,0	1/1:16,4:19:15.24:439,15,0	0/0:31,0:31:62.80:0,63,619	0/0:20,0:21:15.84:0,16,277	1/1:10,9:16:27.05:373,27,0	0/1:9,18:28:34.35:400,0,34	0/1:21,4:25:77.62:354,0,78	0/0:12,0:12:24.02:0,24,257	0/0:21,0:21:36.46:0,36,354	0/0:21,0:21:39.04:0,39,420	1/1:4,13:18:23.90:358,24,0	1/1:10,16:25:54.05:708,54,0	1/1:7,13:20:26.99:358,27,0	1/1:3,11:14:29.97:397,30,0
chr10	63048375	.	A	ACG	2253.93	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=9.633;DP=565;FS=1.885;HRun=0;HaplotypeScore=126.1019;InbreedingCoeff=-0.0885;MQ=54.58;MQ0=7;MQRankSum=-4.576;QD=5.98;ReadPosRankSum=9.837;VQSLOD=1.8700;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:28,3:31:9.05:107,9,0	0/0:10,0:10:30.03:0,30,366	0/0:4,0:3:9.01:0,9,88	0/0:12,0:5:12.03:0,12,144	1/1:5,28:34:1.33:155,1,0	0/1:18,0:18:2.51:166,0,3	0/1:19,0:19:54.93:55,0,181	0/0:43,0:42:99:0,114,1509	0/0:14,0:14:27.08:0,27,389	0/1:21,0:21:99:107,0,138	0/1:21,0:21:92.20:92,0,153	0/1:23,0:23:99:100,0,137	0/1:17,0:17:3.44:141,0,3	0/1:16,0:15:7.56:121,0,8	0/1:16,0:16:52.77:100,0,53	0/1:18,0:17:57.59:164,0,58	0/0:30,0:30:87.15:0,87,1115	0/0:17,0:17:49.54:0,50,583	0/1:17,0:13:64.40:117,0,64	0/1:25,0:24:81.17:187,0,81	0/1:23,0:23:99:108,0,187	0/0:13,0:13:30.07:0,30,411	0/0:23,0:23:51.56:0,52,658	0/0:22,0:22:48.10:0,48,656	0/1:16,0:16:1.28:177,0,1	0/1:28,0:27:99:235,0,111	0/1:19,0:19:26.03:132,0,26	1/1:14,0:14:13.45:157,13,0
chr10	63048521	.	GT	G	1103.78	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=7.138;DP=519;FS=1.156;HRun=10;HaplotypeScore=50.2006;InbreedingCoeff=0.7773;MQ=59.82;MQ0=6;MQRankSum=0.795;QD=14.33;ReadPosRankSum=2.936;VQSLOD=3.5915;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,31:35:89.01:761,89,0	0/0:6,0:6:18.05:0,18,199	0/0:15,1:9:18.05:0,18,199	0/1:13,0:7:7.40:7,0,36	1/1:7,22:27:26.78:462,27,0	0/0:19,0:19:48.12:0,48,523	0/0:14,0:15:27.07:0,27,299	0/0:31,0:34:65.58:0,66,666	0/0:18,0:18:49.37:0,49,526	0/0:26,0:26:54.05:0,54,561	0/0:14,0:14:32.30:0,32,338	0/0:15,0:15:36.06:0,36,384	0/0:14,1:15:11.38:0,11,340	0/0:15,0:15:38.91:0,39,392	0/0:18,0:18:36.09:0,36,391	0/0:19,0:19:48.13:0,48,531	0/0:29,1:30:49.64:0,50,742	0/0:13,0:13:33.09:0,33,365	0/0:25,0:23:45.12:0,45,492	0/0:24,0:24:57.14:0,57,623	0/0:11,0:11:30.08:0,30,332	0/0:12,0:12:33.09:0,33,365	0/0:18,0:18:45.11:0,45,489	0/0:21,0:21:54.12:0,54,580	0/0:13,0:12:27.07:0,27,292	0/0:17,1:18:13.04:0,13,365	0/0:19,0:19:42.10:0,42,457	0/0:8,0:7:18.05:0,18,199
chr10	63050075	.	C	CT	1106.81	PASS	AB=1.000;AC=5;AF=0.093;AN=54;BaseQRankSum=-0.967;DP=589;FS=7.954;HRun=11;HaplotypeScore=68.4332;InbreedingCoeff=0.6152;MQ=59.44;MQ0=16;MQRankSum=-0.036;QD=11.65;ReadPosRankSum=0.906;VQSLOD=2.9210;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:18,36:54:87.02:921,87,0	0/0:7,0:8:5.78:0,6,118	0/0:29,0:8:8.89:0,9,77	./.	1/1:6,16:21:9.92:297,10,0	0/0:24,0:24:41.69:0,42,345	0/0:24,0:24:47.92:0,48,412	0/0:21,0:20:38.95:0,39,332	0/0:18,0:16:1.52:0,2,136	0/0:21,1:22:17.77:0,18,377	0/0:12,0:12:20.93:0,21,174	0/0:16,0:16:32.91:0,33,272	0/0:18,0:18:29.81:0,30,248	0/0:17,0:16:32.82:0,33,285	0/0:16,0:16:29.92:0,30,251	0/0:12,0:12:35.99:0,36,312	0/0:32,0:33:57.54:0,58,634	0/0:34,0:34:67.72:0,68,563	0/0:32,0:29:44.54:0,45,390	0/0:13,0:14:26.93:0,27,225	0/0:21,0:21:41.88:0,42,363	0/0:11,0:11:3.33:0,3,93	0/0:20,0:20:35.92:0,36,307	0/0:27,0:27:48.07:0,48,472	0/0:23,0:22:46.99:0,47,397	0/0:17,0:17:32.98:0,33,286	0/0:9,0:9:23.97:0,24,202	0/1:19,0:19:6.40:6,0,172
chr10	63051703	.	GA	G	471.83	PASS	AB=0.790;AC=6;AF=0.107;AN=56;BaseQRankSum=5.230;DP=372;FS=0.633;HRun=13;HaplotypeScore=42.9436;InbreedingCoeff=0.3989;MQ=53.14;MQ0=16;MQRankSum=0.953;QD=8.58;ReadPosRankSum=1.569;VQSLOD=2.0154;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,16:21:45.66:328,46,0	0/1:5,1:6:3.88:4,0,128	0/0:20,0:3:6.86:0,7,49	0/0:11,1:4:0.07:0,0,17	1/1:5,9:13:10.48:176,10,0	0/0:8,0:8:15.01:0,15,140	0/0:11,0:12:23.20:0,23,257	0/0:21,1:25:43.74:0,44,524	0/1:8,5:11:11.30:88,0,11	0/0:17,0:15:30.04:0,30,289	0/0:8,1:9:2.13:0,2,182	0/0:11,0:12:2.40:0,2,126	0/0:10,0:10:20.82:0,21,183	0/0:16,0:16:29.94:0,30,266	0/0:11,0:11:24.02:0,24,224	0/0:9,0:8:18.03:0,18,174	0/0:27,1:27:29.32:0,29,584	0/0:14,0:14:35.37:0,35,317	0/0:10,0:10:15.30:0,15,174	0/0:18,2:19:32.97:0,33,306	0/0:7,0:7:8.87:0,9,74	0/0:8,0:8:15.02:0,15,142	0/0:8,0:8:12.01:0,12,111	0/0:11,0:9:27.04:0,27,263	0/0:9,1:12:1.11:0,1,182	0/0:11,1:13:7.95:0,8,215	0/0:22,0:22:47.98:0,48,437	0/0:2,0:2:6.01:0,6,58
chr10	63051968	.	ATG	A	1356.56	PASS	AB=1.000;AC=14;AF=0.280;AN=50;BaseQRankSum=-1.553;DP=664;FS=5.357;HRun=0;HaplotypeScore=121.5830;InbreedingCoeff=0.6601;MQ=55.69;MQ0=9;MQRankSum=4.274;QD=6.06;ReadPosRankSum=2.146;VQSLOD=3.1272;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:15,29:46:57.38:587,57,0	1/1:3,7:9:9.01:94,9,0	./.	./.	1/1:9,7:18:17.84:169,18,0	0/0:7,0:21:3:0,3,26	0/1:13,0:32:0:1,0,0	1/1:28,2:28:15.55:145,16,0	0/0:10,0:28:32.93:0,33,294	0/0:30,0:29:29.59:0,30,317	./.	0/0:11,0:23:6.33:0,6,43	0/0:6,0:24:7.24:0,7,66	0/0:22,1:23:3.90:0,4,46	0/0:10,0:27:17.79:0,18,158	0/0:9,0:27:5.62:0,6,50	1/1:15,20:36:34.85:339,35,0	1/1:6,9:15:17.91:184,18,0	0/0:14,0:20:9.12:0,9,58	0/0:7,0:16:2.74:0,3,12	0/1:36,0:34:2.59:3,0,20	0/0:12,0:12:6.01:0,6,84	0/0:12,0:12:6.47:0,6,68	0/0:33,0:33:5.33:0,5,66	0/0:8,0:19:6:0,6,51	0/0:39,0:39:33.86:0,34,460	0/0:18,0:18:14.44:0,14,112	0/0:5,0:14:11.99:0,12,101
chr10	63053661	.	TA	T	800.80	PASS	AB=1.000;AC=29;AF=0.537;AN=54;BaseQRankSum=9.613;DP=320;FS=4.829;HRun=12;HaplotypeScore=52.8021;InbreedingCoeff=0.4466;MQ=60.40;MQ0=4;MQRankSum=-0.064;QD=4.00;ReadPosRankSum=3.918;VQSLOD=0.0026;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,13:16:35.85:279,36,0	./.	0/1:18,0:8:5.71:6,0,23	0/0:11,0:3:2.22:0,2,7	1/1:3,20:24:38.53:443,39,0	0/1:20,0:20:24.74:25,0,31	1/1:14,0:13:11.35:26,11,0	0/0:30,0:30:44.22:0,44,580	0/0:0,0:8:22.87:0,23,123	1/1:8,0:8:9.30:22,9,0	0/1:9,0:8:9.41:9,0,11	0/1:5,0:4:3.19:3,0,18	1/1:9,0:9:9.33:22,9,0	1/1:3,0:3:3.11:7,3,0	1/1:6,0:6:4.62:11,5,0	0/0:4,0:4:8.94:0,9,77	0/0:15,0:14:36.07:0,36,365	0/0:22,0:22:60.09:0,60,599	1/1:21,1:22:0.38:44,0,0	1/1:4,0:4:1.24:3,1,0	0/1:8,0:8:3.06:3,0,23	0/0:1,0:1:3.01:0,3,30	0/0:7,0:7:15.02:0,15,146	0/0:2,0:2:3.89:0,4,33	1/1:14,0:14:12.60:32,13,0	0/0:18,0:17:0.82:0,1,94	1/1:13,0:13:7.82:22,8,0	1/1:6,0:6:7.77:18,8,0
chr10	63053670	.	AAAAG	A	5151.08	PASS	AC=32;AF=0.615;AN=52;BaseQRankSum=2.929;DP=321;FS=0.996;HRun=0;HaplotypeScore=56.9879;InbreedingCoeff=0.8637;MQ=59.09;MQ0=4;MQRankSum=0.504;QD=32.19;ReadPosRankSum=2.633;VQSLOD=4.5829;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:45.12:0,45,574	./.	0/0:15,0:5:5.89:0,6,71	0/0:13,0:3:8.99:0,9,77	0/0:26,0:25:50.70:0,51,832	1/1:2,18:20:48.16:760,48,0	1/1:0,14:13:24.08:383,24,0	0/0:30,0:30:72.21:0,72,1458	0/0:9,0:9:27.08:0,27,482	1/1:0,9:9:27.05:369,27,0	1/1:1,10:10:24:333,24,0	1/1:2,3:4:9.03:147,9,0	1/1:0,9:9:18.06:294,18,0	1/1:0,2:2:6.02:98,6,0	1/1:1,6:7:12.03:174,12,0	1/1:3,0:3:3:28,3,0	0/0:16,0:15:45.11:0,45,927	0/0:23,0:23:63.20:0,63,1367	1/1:3,19:22:60.12:816,60,0	1/1:0,1:1:3.01:48,3,0	1/1:2,5:7:11.96:164,12,0	./.	0/0:8,0:8:18.06:0,18,365	0/0:3,0:3:5.87:0,6,97	1/1:2,14:16:30.06:443,30,0	1/1:5,11:16:33.04:437,33,0	1/1:1,11:12:27.06:413,27,0	1/1:0,6:6:15.05:245,15,0
chr10	63054976	.	AAAACAAAC	A	15446.41	PASS	AB=0.611;AC=31;AF=0.554;AN=56;BaseQRankSum=-2.847;DP=739;FS=21.000;HRun=0;HaplotypeScore=210.8563;InbreedingCoeff=0.9537;MQ=55.38;MQ0=3;MQRankSum=-13.952;QD=38.52;ReadPosRankSum=-1.517;VQSLOD=2.4401;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:36:59.90:0,60,514	0/0:4,0:11:19.13:0,19,501	0/0:31,0:28:27.17:0,27,1052	0/0:26,0:18:21.07:0,21,684	0/0:9,1:29:26.53:0,27,479	1/1:8,15:23:36.12:878,36,0	1/1:8,10:18:18.06:335,18,0	0/0:29,0:29:48.16:0,48,1781	0/0:26,0:26:57.18:0,57,2203	1/1:9,38:47:99:2754,114,0	1/1:8,16:24:45.06:950,45,0	1/1:10,12:22:30.10:652,30,0	1/1:3,18:21:32.62:767,33,0	1/1:13,14:27:42.14:953,42,0	1/1:6,18:24:42.14:951,42,0	1/1:3,32:35:71.91:1760,72,0	0/0:18,0:51:93.31:0,93,3173	0/0:20,0:20:42.14:0,42,1608	1/1:10,9:18:27.08:529,27,0	1/1:13,9:22:30.06:622,30,0	1/1:8,8:16:15.05:301,15,0	0/0:10,0:26:44.96:0,45,379	0/0:6,0:22:44.96:0,45,395	0/0:12,0:30:51:0,51,517	1/1:4,15:19:42.14:903,42,0	1/1:9,22:31:63.20:1413,63,0	1/1:17,25:42:68.98:1643,69,0	0/1:4,7:11:1.11:35,0,1
chr10	63057320	.	A	AT	1238.96	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-8.852;DP=524;FS=2.854;HRun=9;HaplotypeScore=48.1125;InbreedingCoeff=0.9778;MQ=67.28;MQ0=0;MQRankSum=-1.370;QD=26.36;ReadPosRankSum=0.195;VQSLOD=4.0931;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,27:28:69.19:763,69,0	0/0:8,0:8:24:0,24,208	0/0:8,0:8:17.93:0,18,144	0/0:7,0:7:11.98:0,12,104	1/1:1,18:19:54.15:597,54,0	0/0:18,0:18:47.99:0,48,417	0/0:13,0:13:29.96:0,30,256	0/0:28,0:28:68.94:0,69,590	0/0:21,0:21:47.97:0,48,417	0/0:21,0:21:44.98:0,45,391	0/0:21,0:22:50.02:0,50,423	0/0:11,0:11:32.99:0,33,286	0/0:11,0:11:29.99:0,30,260	0/0:14,0:14:38.99:0,39,338	0/0:17,0:17:44.97:0,45,387	0/0:19,0:19:47.98:0,48,417	0/0:30,0:30:83.98:0,84,729	0/0:18,0:18:50.96:0,51,438	0/0:21,0:21:56.98:0,57,495	0/0:28,0:28:49.61:0,50,599	0/0:14,0:14:35.99:0,36,313	0/0:20,0:20:47.98:0,48,417	0/0:17,0:17:50.93:0,51,432	0/0:12,0:12:32.94:0,33,279	0/0:22,0:22:56.97:0,57,492	0/0:31,0:31:80.94:0,81,696	0/0:36,0:36:92.97:0,93,807	0/0:10,0:10:29.99:0,30,260
chr10	63057986	.	CCTCTCTCTCTCT	C	4024.36	PASS	AB=0.884;AC=31;AF=0.620;AN=50;BaseQRankSum=3.506;DP=546;FS=0.887;HRun=0;HaplotypeScore=164.2482;InbreedingCoeff=0.4641;MQ=62.24;MQ0=7;MQRankSum=-5.170;QD=13.55;ReadPosRankSum=0.317;VQSLOD=2.7294;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:40:30.10:0,30,1335	./.	0/0:21,0:16:3.01:0,3,45	0/0:27,0:18:3.95:0,4,46	0/0:32,0:32:3.01:0,3,155	1/1:18,4:21:3.01:103,3,0	1/1:9,5:14:6.02:194,6,0	./.	0/0:12,0:22:15.03:0,15,581	0/1:16,7:22:32.70:219,0,33	1/1:7,6:13:9.03:232,9,0	1/1:9,3:12:3.01:103,3,0	1/1:8,10:18:20.70:617,21,0	1/1:16,8:23:18.06:581,18,0	1/1:12,8:20:15.05:408,15,0	1/1:14,7:22:15.05:496,15,0	1/1:9,4:13:3.01:103,3,0	1/1:4,3:7:3.01:103,3,0	0/1:15,1:16:16.93:121,0,17	1/1:12,6:18:11.70:231,12,0	0/1:24,1:24:5.57:10,0,6	0/0:18,0:18:15.51:0,16,408	0/0:13,0:13:6.02:0,6,197	0/0:21,0:33:42.60:0,43,1394	1/1:10,4:14:3.01:103,3,0	./.	1/1:7,8:14:6.02:193,6,0	1/1:13,5:17:6.02:206,6,0
chr10	63058333	.	CTGTGTGTGTGTGTGTGTGTGTG	C	3807.39	PASS	AB=0.840;AC=36;AF=0.857;AN=42;BaseQRankSum=2.985;DP=652;FS=3.522;HRun=0;HaplotypeScore=286.4249;InbreedingCoeff=0.0369;MQ=60.16;MQ0=38;MQRankSum=0.179;QD=8.37;ReadPosRankSum=1.968;VQSLOD=1.8112;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:19:5.91:165,6,0	0/0:7,0:7:3:0,3,25	./.	./.	0/1:8,0:11:0:0,0,0	./.	1/1:27,0:26:6.49:128,6,0	1/1:24,0:23:3:38,3,0	0/1:22,0:26:61.38:61,0,111	1/1:25,0:25:9.03:302,9,0	./.	0/1:16,8:24:89.55:354,0,90	1/1:16,6:22:9.03:384,9,0	./.	1/1:15,7:22:12.51:592,13,0	1/1:19,6:26:12.28:524,12,0	1/1:28,0:27:4.94:136,5,0	0/1:16,0:15:99:173,0,114	1/1:16,0:15:3.85:136,4,0	1/1:14,0:14:3.01:68,3,0	1/1:58,0:55:3.89:73,4,0	./.	1/1:11,0:11:1.82:5,2,0	1/1:27,0:25:6.02:118,6,0	./.	1/1:21,8:26:17.99:223,18,0	1/1:12,0:13:6.02:225,6,0	1/1:13,0:11:3.90:100,4,0
chr10	63058374	.	T	TA	586.54	PASS	AB=0.910;AC=12;AF=0.214;AN=56;BaseQRankSum=7.562;DP=476;FS=62.316;HRun=0;HaplotypeScore=107.4435;InbreedingCoeff=-0.3127;MQ=47.90;MQ0=39;MQRankSum=-2.176;QD=2.68;ReadPosRankSum=1.525;VQSLOD=0.7085;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,1:19:22.42:0,22,430	0/0:6,0:6:12.03:0,12,149	0/0:8,0:2:6.02:0,6,82	0/0:10,0:3:3.01:0,3,41	0/0:15,0:13:26.91:0,27,353	0/0:7,0:6:11.96:0,12,145	0/1:23,6:26:56.03:56,0,394	0/0:20,0:16:6.82:0,7,527	0/0:21,0:19:23.73:0,24,281	0/1:14,1:12:66.17:66,0,260	0/0:10,0:9:15.05:0,15,207	0/1:25,1:26:85.70:86,0,351	0/0:18,0:17:16.93:0,17,334	0/0:18,1:17:23.92:0,24,328	0/1:21,0:20:76.45:76,0,202	0/1:26,0:25:41.02:41,0,165	0/1:16,5:19:89.94:90,0,250	0/1:12,6:16:65.13:65,0,267	0/1:12,2:11:62.31:62,0,339	0/1:9,2:11:29.88:30,0,188	0/0:41,3:40:19.13:0,19,808	0/0:8,0:8:6.02:0,6,83	0/0:12,0:10:11.60:0,12,159	0/0:27,0:22:6.82:0,7,185	0/0:12,0:11:18.06:0,18,239	0/1:17,0:14:99:108,0,216	0/1:9,0:10:18.22:18,0,311	0/1:9,1:8:36.13:36,0,146
chr10	63059146	.	CT	C	1194.71	PASS	AB=0.857;AC=5;AF=0.089;AN=56;BaseQRankSum=7.891;DP=618;FS=2.360;HRun=10;HaplotypeScore=65.7425;InbreedingCoeff=0.7340;MQ=71.94;MQ0=0;MQRankSum=-2.074;QD=15.32;ReadPosRankSum=0.470;VQSLOD=4.0462;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,28:30:86.02:735,86,0	0/0:11,0:11:24.06:0,24,265	0/0:26,0:23:47.69:0,48,515	0/0:16,1:16:5.74:0,6,211	1/1:2,22:24:62.91:539,63,0	0/0:29,0:30:84.06:0,84,910	0/0:17,0:17:42.59:0,43,465	0/0:31,0:31:75.09:0,75,787	0/0:22,0:22:57.10:0,57,603	0/0:29,0:29:78.20:0,78,856	0/0:23,0:23:57.15:0,57,628	0/0:14,0:14:33.08:0,33,358	0/0:21,0:21:48.60:0,49,531	0/0:16,0:16:38.90:0,39,411	0/0:22,0:22:19.09:0,19,437	0/0:22,3:26:13.90:0,14,593	0/0:25,0:26:65.96:0,66,695	0/0:18,0:18:42.11:0,42,464	0/0:28,0:28:75.20:0,75,830	0/0:33,1:34:70.19:0,70,985	0/1:20,4:24:50.07:50,0,411	0/0:11,0:12:29.90:0,30,304	0/0:17,0:17:51.14:0,51,562	0/0:21,0:23:62.79:0,63,646	0/0:12,0:13:32.92:0,33,346	0/0:26,0:26:78.14:0,78,840	0/0:25,0:25:66.16:0,66,720	0/0:13,0:13:27:0,27,267
chr10	63060648	.	TA	T	1288.70	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.467;DP=413;FS=12.218;HRun=8;HaplotypeScore=39.6423;InbreedingCoeff=0.8977;MQ=58.18;MQ0=9;MQRankSum=0.423;QD=19.83;ReadPosRankSum=2.480;VQSLOD=2.4819;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,30:31:66.11:637,66,0	0/0:6,0:6:18.05:0,18,207	0/0:10,0:6:18.05:0,18,204	0/0:7,1:5:8.92:0,9,106	1/1:1,32:33:81.09:773,81,0	0/0:20,0:20:57.17:0,57,686	0/0:7,0:6:18.01:0,18,201	0/0:39,0:38:78.05:0,78,1151	0/0:6,0:6:18.06:0,18,217	0/0:20,0:20:57.17:0,57,688	0/0:16,0:16:45.13:0,45,532	0/0:9,0:9:27.07:0,27,315	0/0:13,0:13:33.10:0,33,399	0/0:7,0:7:21.04:0,21,231	0/0:10,0:10:24.07:0,24,290	0/0:9,0:9:21.02:0,21,237	0/0:30,0:26:72.18:0,72,853	0/0:25,0:25:51.14:0,51,603	0/0:26,0:25:74.91:0,75,844	0/0:13,0:12:36.09:0,36,411	0/0:7,0:6:18.04:0,18,205	0/0:5,0:5:15.05:0,15,181	0/0:4,0:4:12.04:0,12,145	0/0:4,1:5:9.03:0,9,109	0/0:11,0:11:33.10:0,33,399	0/0:15,0:15:39.11:0,39,460	0/0:18,0:16:39.10:0,39,458	0/0:9,0:9:27.08:0,27,326
chr10	63060863	.	GA	G	2050.73	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=0.878;DP=561;FS=5.612;HRun=9;HaplotypeScore=75.6323;InbreedingCoeff=0.9924;MQ=69.22;MQ0=0;MQRankSum=0.337;QD=21.59;ReadPosRankSum=-0.622;VQSLOD=4.1942;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,108,1204	1/1:0,7:7:18.01:165,18,0	0/0:16,0:15:32.64:0,33,342	0/0:13,0:13:17.99:0,18,193	0/0:27,0:27:67.38:0,67,728	0/0:27,0:27:75.21:0,75,856	0/0:20,0:20:57.09:0,57,628	1/1:5,32:36:93.03:846,93,0	0/0:14,0:14:39.12:0,39,449	0/0:24,0:24:57.17:0,57,658	0/0:13,0:13:33.10:0,33,381	0/0:20,0:19:48.14:0,48,554	0/0:15,0:15:39.12:0,39,450	0/0:22,0:22:54.16:0,54,623	0/0:18,0:18:54.16:0,54,618	0/0:20,0:20:60.18:0,60,692	1/1:2,27:29:81.04:741,81,0	1/1:2,20:22:50.98:459,51,0	0/0:32,1:33:50.71:0,51,788	0/0:22,0:24:62.05:0,62,678	0/0:25,0:25:72.21:0,72,831	0/0:12,0:12:33.10:0,33,381	0/0:9,0:9:18.05:0,18,208	0/0:14,0:14:39.12:0,39,449	0/0:15,0:15:45.13:0,45,512	0/0:17,0:17:42.12:0,42,476	0/0:22,0:22:60.17:0,60,686	0/0:9,0:9:24.07:0,24,277
chr10	63062183	.	TAA	T	2929.98	PASS	AB=0.586;AC=40;AF=0.714;AN=56;BaseQRankSum=-1.270;DP=447;FS=3.185;HRun=17;HaplotypeScore=58.8330;InbreedingCoeff=0.6859;MQ=74.58;MQ0=5;MQRankSum=-0.828;QD=10.10;ReadPosRankSum=5.462;VQSLOD=1.7088;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,2:32:29.28:205,29,0	0/0:3,0:4:5.99:0,6,52	0/0:41,0:15:21.24:0,21,170	0/0:24,0:12:0.54:0,1,26	1/1:8,1:19:16.69:95,17,0	0/1:5,9:15:19.03:140,0,19	1/1:3,14:17:32.84:261,33,0	0/0:21,0:33:61.96:0,62,573	0/0:10,0:12:26.48:0,26,235	1/1:10,9:20:26.59:213,27,0	1/1:1,10:13:20.41:193,20,0	1/1:5,8:13:14.80:119,15,0	1/1:4,9:14:7.49:179,7,0	1/1:0,8:8:17.96:142,18,0	1/1:6,10:16:7.01:191,7,0	1/1:3,12:15:17.77:181,18,0	0/0:10,0:19:29.87:0,30,278	0/0:7,0:23:32.38:0,32,299	1/1:7,14:21:40.28:312,40,0	1/1:1,2:4:8.72:59,9,0	1/1:3,4:7:11.90:95,12,0	1/1:2,5:7:8.92:71,9,0	1/1:1,5:7:5.57:35,6,0	1/1:2,6:8:8.94:71,9,0	0/1:3,6:12:6.44:76,0,6	1/1:2,11:13:29.61:225,30,0	1/1:4,7:15:14.16:172,14,0	1/1:5,6:12:11.63:83,12,0
chr10	63064250	.	AG	A	442.50	PASS	AC=4;AF=0.077;AN=52;BaseQRankSum=5.942;DP=703;FS=1.001;HRun=1;HaplotypeScore=70.7678;InbreedingCoeff=0.9942;MQ=73.74;MQ0=1;MQRankSum=-3.923;QD=26.03;ReadPosRankSum=-1.493;VQSLOD=3.1356;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:64,0:64:99:0,193,3052	./.	0/0:32,0:30:83.04:0,83,1300	0/0:27,0:27:75.68:0,76,1128	0/0:29,0:29:84.27:0,84,1316	0/0:19,0:19:57.19:0,57,908	0/0:35,0:35:99:0,105,1599	1/1:0,7:6:18.05:234,18,0	0/0:25,0:25:72.22:0,72,1103	0/0:28,0:28:84.25:0,84,1314	0/0:22,0:21:57.18:0,57,886	0/0:31,0:31:93.29:0,93,1436	0/0:32,0:32:93.30:0,93,1459	0/0:26,0:26:78.25:0,78,1218	0/0:34,0:34:99:0,102,1604	0/0:31,0:31:93.30:0,93,1462	./.	1/1:0,10:10:24.08:327,24,0	0/0:24,0:24:69.22:0,69,1061	0/0:24,0:24:72.20:0,72,1106	0/0:32,0:32:93.27:0,93,1408	0/0:21,0:21:60.20:0,60,958	0/0:18,0:18:51.16:0,51,781	0/0:34,0:34:99:0,102,1628	0/0:15,0:15:39.08:0,39,594	0/0:31,0:31:93.32:0,93,1482	0/0:27,0:27:81.26:0,81,1260	0/0:9,0:9:27.09:0,27,431
chr10	63064980	.	TAAG	T	1821.79	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=7.434;DP=553;FS=2.068;HRun=0;HaplotypeScore=79.3156;InbreedingCoeff=0.9754;MQ=96.88;MQ0=0;MQRankSum=-4.062;QD=37.18;ReadPosRankSum=3.790;VQSLOD=4.4436;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:84.29:0,84,1935	0/0:7,0:7:18.06:0,18,415	0/0:29,0:29:81.28:0,81,1760	0/0:28,0:28:84.29:0,84,1892	0/0:12,0:12:36.12:0,36,830	0/0:17,0:17:51.18:0,51,1151	0/0:21,0:21:63.22:0,63,1452	0/0:26,0:26:75.26:0,75,1730	0/0:15,0:15:45.15:0,45,1036	0/0:14,0:14:39.13:0,39,876	0/0:9,0:9:27.09:0,27,621	0/0:24,0:24:72.25:0,72,1660	0/0:20,0:20:33.21:0,33,1221	0/0:29,0:29:87.30:0,87,1986	0/0:19,0:19:51.18:0,51,1174	0/0:17,0:17:51.18:0,51,1176	0/0:35,0:35:99:0,105,2399	0/0:19,0:19:54.16:0,54,1153	0/0:21,0:20:51.18:0,51,1177	0/0:21,0:21:60.21:0,60,1383	0/0:19,0:19:57.20:0,57,1313	1/1:0,12:12:24.08:409,24,0	1/1:0,11:11:30.06:480,30,0	1/1:0,26:26:63.22:1075,63,0	0/0:20,0:20:54.19:0,54,1226	0/0:21,0:21:57.18:0,57,1258	0/0:29,0:29:81.28:0,81,1866	0/0:3,0:3:9.03:0,9,208
chr10	63070540	.	AC	A	2087.29	PASS	AB=0.974;AC=9;AF=0.161;AN=56;BaseQRankSum=11.335;DP=590;FS=6.230;HRun=1;HaplotypeScore=60.5236;InbreedingCoeff=0.8524;MQ=66.94;MQ0=9;MQRankSum=0.501;QD=14.01;ReadPosRankSum=-0.829;VQSLOD=2.3211;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,102,1319	1/1:1,4:5:12.01:143,12,0	0/1:72,2:21:18.81:19,0,234	0/0:57,1:21:17.90:0,18,243	0/0:13,0:13:39.13:0,39,516	0/0:25,0:25:75.18:0,75,931	0/0:10,0:10:30.08:0,30,381	1/1:2,22:24:68.95:759,69,0	0/0:8,0:8:24.06:0,24,302	0/0:29,0:29:83:0,83,998	0/0:19,0:19:57.16:0,57,726	0/0:19,0:19:57.16:0,57,714	0/0:9,0:9:27.09:0,27,349	0/0:5,0:5:15.05:0,15,199	0/0:19,0:19:57.11:0,57,705	0/0:8,0:8:24.07:0,24,303	1/1:1,29:30:69.21:935,69,0	1/1:1,15:16:30.08:394,30,0	0/0:22,0:22:66.20:0,66,846	0/0:33,0:33:99:0,99,1227	0/0:7,0:7:21.05:0,21,263	0/0:11,0:11:33.09:0,33,420	0/0:19,0:19:57.17:0,57,739	0/0:17,0:17:50.13:0,50,605	0/0:21,0:21:63.12:0,63,771	0/0:27,0:27:81.23:0,81,1021	0/0:19,0:19:57.13:0,57,691	0/0:9,0:9:27.01:0,27,305
chr10	63071140	.	T	TC	393.71	PASS	AC=4;AF=0.077;AN=52;BaseQRankSum=-0.399;DP=368;FS=5.456;HRun=1;HaplotypeScore=64.6423;InbreedingCoeff=0.8631;MQ=39.60;MQ0=44;MQRankSum=-1.888;QD=11.58;ReadPosRankSum=2.986;VQSLOD=2.1469;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,12:15:26.68:338,27,0	0/0:9,0:7:17.67:0,18,151	./.	./.	1/1:5,10:13:14.98:172,15,0	0/0:14,0:13:21.02:0,21,226	0/0:8,0:7:15.05:0,15,188	0/0:20,0:18:28.36:0,28,390	0/0:7,0:6:9.02:0,9,103	0/0:21,0:19:41.84:0,42,421	0/0:21,0:21:32.46:0,32,288	0/0:11,0:7:18.01:0,18,191	0/0:12,0:11:29.72:0,30,264	0/0:7,0:6:17.79:0,18,161	0/0:15,0:14:29.89:0,30,266	0/0:4,0:4:9.01:0,9,91	0/0:27,0:25:56.56:0,57,598	0/0:17,0:11:24.02:0,24,269	0/0:7,0:7:18.04:0,18,213	0/0:23,0:20:53.80:0,54,503	0/0:11,0:5:8.94:0,9,66	0/0:9,0:6:17.92:0,18,169	0/0:11,0:11:14.90:0,15,147	0/0:19,0:15:29.96:0,30,294	0/0:13,0:13:30.07:0,30,348	0/0:18,0:18:33.05:0,33,367	0/0:7,0:6:14.99:0,15,156	0/0:20,0:17:26.98:0,27,289
chr10	63073957	.	CT	C	1069.18	PASS	AB=0.990;AC=32;AF=0.571;AN=56;BaseQRankSum=7.501;DP=351;FS=4.460;HRun=1;HaplotypeScore=60.5657;InbreedingCoeff=-0.0581;MQ=81.87;MQ0=0;MQRankSum=-1.206;QD=3.65;ReadPosRankSum=8.974;VQSLOD=-0.1761;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:23:38.12:81,0,38	0/0:4,0:4:2.04:0,2,93	0/0:17,0:14:13.79:0,14,221	0/0:18,1:19:8.73:0,9,322	1/1:12,2:14:6.55:144,7,0	0/1:14,0:14:22:35,0,22	1/1:12,0:12:22.05:62,22,0	0/1:13,0:13:12.72:13,0,234	0/1:15,0:15:45.62:51,0,46	1/1:13,0:13:16.67:73,17,0	0/1:5,0:5:15.62:16,0,38	1/1:15,0:15:22.39:116,22,0	0/1:15,0:15:28.86:68,0,29	0/1:13,0:13:15.49:45,0,15	0/1:18,0:18:45.89:46,0,63	1/1:14,0:14:21.89:68,22,0	0/0:15,0:15:41.96:0,42,485	0/0:3,0:3:6:0,6,75	0/1:14,0:14:8.45:8,0,82	1/1:13,0:13:22.14:69,22,0	0/1:17,0:17:16.96:44,0,17	0/1:10,0:10:0.70:45,0,1	0/1:12,0:12:17.16:17,0,28	1/1:5,0:5:11.23:36,11,0	1/1:6,0:6:11.01:34,11,0	0/1:5,1:6:11.10:33,0,11	0/1:22,0:22:42.99:111,0,43	1/1:4,0:4:9.31:30,9,0
chr10	63073958	.	TC	T	5927.94	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=1.372;DP=347;FS=1.289;HRun=7;HaplotypeScore=44.7540;InbreedingCoeff=0.9273;MQ=82.12;MQ0=0;MQRankSum=-1.913;QD=21.56;ReadPosRankSum=5.477;VQSLOD=4.1079;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,19:23:54.12:551,54,0	0/0:4,0:4:9.03:0,9,113	0/0:17,0:14:25.25:0,25,217	0/0:19,0:19:15.38:0,15,235	1/1:3,11:14:33.07:333,33,0	1/1:2,12:14:30.07:306,30,0	1/1:0,12:12:33.08:337,33,0	0/0:12,0:12:26.84:0,27,309	1/1:3,12:15:24.05:244,24,0	1/1:0,12:12:30.06:305,30,0	1/1:1,3:4:6.01:61,6,0	1/1:2,13:15:33.07:336,33,0	1/1:3,11:14:24.04:244,24,0	1/1:2,11:13:24.04:245,24,0	1/1:4,14:18:30.06:306,30,0	1/1:0,14:14:30.04:306,30,0	0/0:16,0:16:45.12:0,45,539	0/0:4,0:4:9.01:0,9,99	1/1:4,10:14:30.07:306,30,0	1/1:0,13:13:30.06:305,30,0	1/1:2,14:16:36.08:367,36,0	1/1:1,8:9:21.04:214,21,0	1/1:1,11:12:15.03:153,15,0	1/1:0,5:5:15.03:153,15,0	1/1:0,6:6:15.03:153,15,0	1/1:3,3:6:12.03:122,12,0	1/1:4,18:22:45.09:458,45,0	1/1:0,4:4:12.03:122,12,0
chr10	63074267	.	AT	A	1360.12	PASS	AB=0.681;AC=26;AF=0.464;AN=56;BaseQRankSum=-2.943;DP=402;FS=8.754;HRun=16;HaplotypeScore=63.7898;InbreedingCoeff=0.4433;MQ=69.07;MQ0=12;MQRankSum=4.163;QD=6.07;ReadPosRankSum=4.755;VQSLOD=2.2004;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:16:23.05:0,23,126	0/0:0,0:7:17.04:0,17,85	0/0:19,0:11:0:0,0,0	0/0:5,0:4:0:0,0,0	0/0:7,0:12:17.73:0,18,94	0/1:7,9:17:46.05:74,0,46	1/1:5,10:18:3.26:106,3,0	0/0:27,0:35:67.02:0,67,417	0/0:12,0:11:11.95:0,12,93	1/1:2,8:11:16.35:138,16,0	1/1:5,10:16:0.21:105,0,0	0/1:5,3:10:6.40:65,0,6	1/1:6,5:11:21.78:120,22,0	0/1:4,4:9:14.34:31,0,14	1/1:5,9:14:16.58:95,17,0	0/1:6,3:9:15.85:16,0,17	0/0:13,0:23:52.25:0,52,322	0/0:12,0:18:32.28:0,32,212	0/1:10,9:18:18.63:112,0,19	1/1:8,6:15:14.56:106,15,0	1/1:5,9:13:14.66:90,15,0	0/0:10,0:11:15.25:0,15,79	0/0:9,0:9:18.41:0,18,110	0/0:4,0:3:5.80:0,6,33	1/1:1,4:5:8.82:54,9,0	1/1:9,14:25:42.14:244,42,0	0/1:9,1:13:25.42:46,0,25	1/1:4,8:11:25.57:150,26,0
chr10	63075627	.	A	AG	18171.53	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=-13.702;DP=622;FS=0.000;HRun=2;HaplotypeScore=54.2906;InbreedingCoeff=0.9994;MQ=84.10;MQ0=0;MQRankSum=-4.502;QD=37.70;ReadPosRankSum=4.915;VQSLOD=4.9990;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,23:24:60.20:864,60,0	0/0:8,0:8:24.08:0,24,297	0/0:20,0:20:51.10:0,51,577	0/0:16,0:16:38.96:0,39,426	1/1:2,31:33:93.24:1278,93,0	1/1:0,25:25:66.22:950,66,0	1/1:0,20:20:54.18:778,54,0	0/0:28,0:28:75.20:0,75,884	0/0:17,0:17:45.14:0,45,557	1/1:0,22:22:66.21:930,66,0	1/1:1,31:32:93.29:1319,93,0	1/1:0,19:19:51.17:734,51,0	1/1:0,19:20:57.16:818,57,0	1/1:0,16:16:42.14:605,42,0	1/1:1,29:30:72.24:1037,72,0	1/1:0,27:27:75.18:1054,75,0	0/0:31,0:31:93.19:0,93,1104	0/0:20,0:20:54.15:0,54,656	1/1:0,13:13:39.11:536,39,0	1/1:2,28:30:81.23:1143,81,0	1/1:0,15:15:39.13:561,39,0	1/1:0,20:20:57.19:820,57,0	1/1:0,19:19:51.09:708,51,0	1/1:1,26:27:57.19:821,57,0	1/1:0,24:24:60.20:864,60,0	1/1:2,24:26:72.23:1018,72,0	1/1:0,30:31:66:945,66,0	1/1:0,9:9:27.09:389,27,0
chr10	63076139	.	GAAAGA	G	14541.36	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=13.655;DP=677;FS=18.444;HRun=0;HaplotypeScore=127.0559;InbreedingCoeff=0.9481;MQ=66.26;MQ0=10;MQRankSum=-3.016;QD=32.46;ReadPosRankSum=4.273;VQSLOD=3.6367;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:10,28:38:63.21:1177,63,0	0/0:9,0:9:27.09:0,27,699	0/0:38,0:24:11.21:0,11,553	0/0:37,0:17:0.88:0,1,126	1/1:6,32:38:90.30:1600,90,0	1/1:1,19:20:42.14:800,42,0	1/1:6,15:21:39.13:741,39,0	0/0:26,0:26:39.13:0,39,1010	1/1:21,0:21:39.11:435,39,0	1/1:11,21:32:57.17:986,57,0	1/1:7,15:22:30.10:518,30,0	1/1:7,8:15:15.05:286,15,0	1/1:4,19:23:42.14:794,42,0	1/1:2,9:11:21.07:400,21,0	1/1:5,20:25:47.90:914,48,0	1/1:5,13:18:30.10:567,30,0	0/0:25,0:25:54.18:0,54,1542	0/0:16,0:16:36.12:0,36,977	1/1:8,16:21:48.16:859,48,0	1/1:8,18:26:48.13:827,48,0	1/1:3,5:8:12.04:229,12,0	0/0:28,0:28:63.20:0,63,1655	0/0:30,0:30:66.22:0,66,1793	0/0:18,0:18:33.11:0,33,844	1/1:4,28:32:60.21:1133,60,0	1/1:4,21:25:60.21:1133,60,0	1/1:11,22:33:36.12:686,36,0	1/1:0,16:16:24.08:457,24,0
chr10	63076153	.	GAAAAGA	G	3806.75	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=15.910;DP=633;FS=18.677;HRun=0;HaplotypeScore=166.2339;InbreedingCoeff=-0.2269;MQ=65.06;MQ0=11;MQRankSum=-4.690;QD=9.09;ReadPosRankSum=10.688;VQSLOD=-0.1289;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:33:59.61:254,0,60	0/0:10,0:10:30.10:0,30,1011	0/0:34,0:20:27.28:0,27,818	0/0:36,0:15:12.37:0,12,197	0/1:34,0:34:11.71:308,0,12	0/1:21,0:21:35.36:179,0,35	0/1:18,0:18:0.37:168,0,0	0/0:23,0:23:54.18:0,54,1522	1/1:0,23:23:39.13:877,39,0	0/1:23,0:23:15.12:182,0,15	0/1:21,0:21:82.77:83,0,173	0/1:11,0:11:56.98:57,0,99	0/1:25,0:25:24.78:174,0,25	0/1:16,0:16:71.49:71,0,239	0/1:25,0:25:99:199,0,105	0/1:14,0:14:9.17:125,0,9	0/0:23,0:23:66.23:0,66,2073	0/0:15,0:15:39.13:0,39,1243	0/1:25,0:22:99:153,0,154	0/1:22,0:22:76.84:152,0,77	0/1:10,0:10:43.76:44,0,102	0/0:27,0:27:72.25:0,72,2190	0/0:29,0:29:75.26:0,75,2286	0/0:16,0:16:33.11:0,33,1003	0/1:30,0:30:18.75:249,0,19	0/1:28,0:28:99:237,0,170	1/1:23,0:23:34.83:194,35,0	0/1:17,0:17:14.81:103,0,15
chr10	63076347	.	CTCATTCATTCAT	C	19046.03	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-2.596;DP=614;FS=1.142;HRun=0;HaplotypeScore=227.3986;InbreedingCoeff=0.8456;MQ=62.70;MQ0=3;MQRankSum=-8.470;QD=38.87;ReadPosRankSum=0.155;VQSLOD=4.0466;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:30:48.16:0,48,1283	1/1:3,7:10:18.06:623,18,0	0/0:17,0:15:6.90:0,7,99	0/0:19,0:9:12.04:0,12,547	0/0:9,0:29:69.24:0,69,1935	1/1:11,17:28:36.12:1245,36,0	1/1:8,8:16:12.04:415,12,0	1/1:30,0:29:15.03:294,15,0	0/0:11,0:28:49.17:0,49,1220	1/1:13,7:20:18.06:622,18,0	1/1:10,16:25:30.10:968,30,0	1/1:3,10:13:12.04:415,12,0	1/1:7,16:23:39.13:1349,39,0	1/1:10,15:25:36.12:1245,36,0	1/1:19,15:34:35.17:1343,35,0	1/1:12,12:24:33.11:1134,33,0	1/1:8,5:13:6.02:208,6,0	1/1:6,3:9:5.93:121,6,0	1/1:9,4:13:12.04:415,12,0	1/1:7,17:24:45.15:1556,45,0	1/1:16,9:25:12.04:415,12,0	1/1:9,11:20:24.08:830,24,0	1/1:12,14:27:27.25:1013,27,0	1/1:14,4:18:2.51:103,3,0	1/1:15,12:27:33.11:1141,33,0	1/1:15,21:36:63.20:2033,63,0	1/1:5,12:17:33.11:1141,33,0	1/1:8,4:12:12.04:415,12,0
chr10	63076781	.	TCA	T	128.30	PASS	AB=0.834;AC=5;AF=0.089;AN=56;BaseQRankSum=3.980;DP=634;FS=1.714;HRun=0;HaplotypeScore=135.7897;InbreedingCoeff=-0.1090;MQ=65.24;MQ0=3;MQRankSum=-2.786;QD=1.51;ReadPosRankSum=-1.920;VQSLOD=2.3645;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:9.49:0,9,407	0/0:12,0:12:36.12:0,36,662	0/0:42,1:24:31.13:0,31,604	0/0:33,1:11:12.52:0,13,187	0/0:22,0:22:54.01:0,54,950	0/0:17,0:17:24.05:0,24,379	0/0:11,0:11:15.05:0,15,250	0/0:41,0:41:96.14:0,96,2027	0/0:20,0:20:54.18:0,54,981	0/0:28,0:28:75.21:0,75,1335	0/0:21,0:21:45.15:0,45,849	0/1:19,2:21:21.70:22,0,964	0/1:19,1:20:6.78:7,0,524	0/0:14,0:14:0.52:0,1,135	0/0:30,0:30:41.54:0,42,636	0/0:19,0:19:21.07:0,21,399	0/0:24,0:24:43.50:0,44,1174	0/0:14,1:14:42.14:0,42,786	0/0:26,0:25:57.71:0,58,1113	0/0:34,0:34:79.51:0,80,1389	0/0:10,0:10:21.07:0,21,396	0/1:13,3:16:28.68:29,0,608	0/1:12,6:18:99:143,0,587	0/1:6,4:10:41.16:41,0,262	0/0:21,0:20:33.11:0,33,605	0/0:26,0:26:65.81:0,66,1185	0/0:35,0:34:45.60:0,46,770	0/0:12,0:12:19.93:0,20,433
chr10	63076793	.	C	CTTTTTTTTTTG	13851.53	PASS	AB=0.986;AC=46;AF=0.821;AN=56;BaseQRankSum=-4.003;DP=673;FS=4.459;HRun=0;HaplotypeScore=186.6589;InbreedingCoeff=0.5002;MQ=60.25;MQ0=13;MQRankSum=-3.862;QD=23.64;ReadPosRankSum=1.328;VQSLOD=3.6430;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:31,0:31:28.78:958,29,0	0/0:7,0:13:19.32:0,19,512	0/0:57,0:25:5.19:0,5,105	0/1:46,0:11:5.34:5,0,27	1/1:21,0:20:32.72:989,33,0	1/1:20,0:19:5.90:267,6,0	1/1:10,0:10:6.02:247,6,0	0/1:32,0:37:68.53:69,0,496	0/0:16,0:17:36.11:0,36,629	1/1:32,0:32:68.13:1159,68,0	1/1:21,0:20:20.43:509,20,0	1/1:23,0:23:49.72:833,50,0	1/1:19,0:19:13.03:281,13,0	1/1:13,0:12:6.02:171,6,0	1/1:28,0:28:20.87:750,21,0	1/1:22,0:22:14.88:459,15,0	0/1:26,0:33:18.47:18,0,853	0/1:11,0:12:3.07:3,0,457	1/1:27,0:26:63.45:1394,63,0	1/1:27,0:27:29.60:802,30,0	1/1:8,0:7:17.94:180,18,0	1/1:15,0:15:22.50:200,23,0	1/1:22,0:22:26.03:417,26,0	1/1:11,0:11:14.96:407,15,0	1/1:24,0:21:20.96:772,21,0	1/1:9,15:31:66.38:1349,66,0	1/1:37,0:36:30.35:919,30,0	1/1:12,0:10:21.05:691,21,0
chr10	63076794	.	T	TTTTTTTTTTG	13009.95	PASS	AB=1.000;AC=45;AF=0.804;AN=56;BaseQRankSum=-3.361;DP=691;FS=10.031;HRun=0;HaplotypeScore=184.5691;InbreedingCoeff=0.5827;MQ=59.59;MQ0=13;MQRankSum=-4.288;QD=22.74;ReadPosRankSum=0.979;VQSLOD=3.5132;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:32,0:32:29.91:877,30,0	0/0:13,0:13:31.24:0,31,509	0/0:56,0:25:7.20:0,7,121	0/1:50,0:12:3.71:4,0,27	1/1:22,0:21:32.72:936,33,0	1/1:20,0:19:6.38:238,6,0	1/1:10,0:10:6.02:244,6,0	0/1:38,0:37:18.60:19,0,488	0/0:17,0:17:36.11:0,36,611	1/1:36,0:36:79.60:1261,80,0	1/1:21,0:20:20.35:483,20,0	1/1:22,0:22:46.55:718,47,0	1/1:8,7:20:1.44:245,1,0	1/1:13,0:12:5.93:139,6,0	1/1:30,0:31:18.63:702,19,0	1/1:21,0:21:13.24:449,13,0	0/0:32,0:31:21.24:0,21,870	0/1:14,0:13:24.16:24,0,435	1/1:28,0:27:63.26:1292,63,0	1/1:31,0:31:34.64:782,35,0	1/1:8,0:7:20.96:234,21,0	1/1:15,0:15:19.65:176,20,0	1/1:22,0:22:20.77:388,21,0	1/1:11,0:11:14.87:348,15,0	1/1:24,0:21:20.96:759,21,0	1/1:31,0:31:66.73:1172,67,0	1/1:38,0:37:30.36:852,30,0	1/1:14,0:12:20.90:667,21,0
chr10	63076797	.	T	TTTTTTTGTTTG	16598.33	PASS	AB=0.803;AC=38;AF=0.679;AN=56;BaseQRankSum=-7.457;DP=739;FS=3.847;HRun=0;HaplotypeScore=181.8652;InbreedingCoeff=0.6689;MQ=57.29;MQ0=17;MQRankSum=-3.363;QD=32.55;ReadPosRankSum=2.671;VQSLOD=4.5396;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:8,22:36:29.54:1112,30,0	0/0:14,0:14:31.88:0,32,662	0/0:64,0:24:23.26:0,23,259	0/0:55,0:13:3.87:0,4,53	1/1:6,17:28:44.62:1266,45,0	1/1:2,12:20:5.91:304,6,0	1/1:2,7:13:9.03:420,9,0	0/0:34,0:33:40.95:0,41,875	0/0:14,0:14:35.45:0,35,646	1/1:9,17:35:81.22:1687,81,0	1/1:9,8:18:20.59:580,21,0	1/1:21,0:21:50.19:855,50,0	0/1:18,0:18:0.62:304,0,1	1/1:4,7:18:5.80:172,6,0	1/1:6,20:33:16.16:806,16,0	0/1:3,14:23:4.43:484,0,4	0/0:33,0:32:64:0,64,1362	0/0:15,0:14:37.46:0,37,696	1/1:11,13:35:82.90:1825,83,0	1/1:8,15:31:38.65:1053,39,0	1/1:8,0:7:21.01:332,21,0	0/1:15,0:15:6.55:188,0,7	1/1:21,0:21:31.06:638,31,0	1/1:9,0:9:14.58:425,15,0	1/1:8,12:26:20.96:823,21,0	1/1:30,1:31:68.77:1543,69,0	1/1:10,16:42:32.90:1013,33,0	0/1:10,7:17:15.66:768,0,16
chr10	63076798	.	T	TTTTTTGTTTG	14402.56	PASS	AB=0.973;AC=37;AF=0.661;AN=56;BaseQRankSum=-5.813;DP=727;FS=0.410;HRun=0;HaplotypeScore=179.0041;InbreedingCoeff=0.4811;MQ=57.69;MQ0=18;MQRankSum=-3.785;QD=26.14;ReadPosRankSum=4.777;VQSLOD=4.2528;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:33,1:34:29.65:953,30,0	0/0:14,0:14:39:0,39,697	0/0:67,0:25:26.02:0,26,279	0/1:57,0:13:5.27:5,0,55	1/1:27,2:28:29.76:1092,30,0	1/1:22,0:21:5.66:251,6,0	1/1:11,1:12:9.03:387,9,0	0/0:33,0:32:65.02:0,65,933	0/0:14,0:14:35.45:0,35,611	1/1:32,1:32:70.49:1491,70,0	1/1:18,2:19:20.49:542,20,0	1/1:19,1:20:36.86:700,37,0	0/1:17,1:18:13.78:278,0,14	0/1:18,0:17:15.65:122,0,16	1/1:31,1:32:4.21:726,4,0	0/1:21,1:22:1.54:470,0,2	0/0:33,0:32:85.98:0,86,1379	0/0:15,0:14:34.05:0,34,654	1/1:32,1:32:45.69:1467,46,0	1/1:30,0:30:18.51:893,19,0	1/1:8,0:7:21.01:332,21,0	0/1:15,0:15:43.94:181,0,44	1/1:21,0:21:28.74:617,29,0	0/1:9,0:9:1.29:333,0,1	1/1:25,2:24:20.83:774,21,0	1/1:29,1:30:53.56:1200,54,0	1/1:40,1:41:28.02:875,28,0	0/1:17,2:17:22.43:713,0,22
chr10	63076803	.	T	TGTTTG	5957.89	PASS	AB=0.970;AC=24;AF=0.429;AN=56;BaseQRankSum=4.246;DP=710;FS=18.898;HRun=0;HaplotypeScore=149.1060;InbreedingCoeff=-0.3306;MQ=54.77;MQ0=18;MQRankSum=-5.613;QD=12.70;ReadPosRankSum=6.805;VQSLOD=2.6609;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:32,2:34:92.20:433,0,92	0/0:14,0:14:39.06:0,39,599	0/0:74,0:27:29.04:0,29,332	0/0:55,0:9:10.07:0,10,75	0/1:27,0:26:99:441,0,117	0/1:23,0:22:86.65:91,0,87	1/1:12,0:12:9.03:159,9,0	0/0:32,0:31:80.75:0,81,1041	0/0:15,0:15:35.78:0,36,535	0/1:29,0:28:99:478,0,207	0/1:13,0:12:30.94:218,0,31	0/1:18,2:20:99:397,0,163	0/1:17,2:19:29.54:139,0,30	0/1:19,0:18:39.19:39,0,123	0/1:29,0:29:55.61:252,0,56	0/1:21,0:22:31.89:203,0,32	0/0:35,0:34:92.73:0,93,1310	0/0:15,0:14:39.54:0,40,609	0/1:30,0:29:99:621,0,252	0/1:27,0:27:99:222,0,135	1/1:7,1:7:21:249,21,0	0/1:12,0:13:95.60:96,0,146	0/1:18,0:19:66.18:332,0,66	0/1:10,0:10:75.64:76,0,90	0/1:24,0:21:18.97:301,0,19	0/1:25,3:28:99:485,0,150	1/1:39,2:40:13.56:436,14,0	0/1:21,0:20:99:289,0,155
chr10	63078249	.	CT	C	4574.69	PASS	AB=0.723;AC=47;AF=0.839;AN=56;BaseQRankSum=1.340;DP=416;FS=22.377;HRun=12;HaplotypeScore=69.0820;InbreedingCoeff=0.2791;MQ=68.53;MQ0=7;MQRankSum=-1.972;QD=12.10;ReadPosRankSum=0.676;VQSLOD=2.6985;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,13:16:23.90:186,24,0	1/1:2,1:3:5.97:46,6,0	0/1:22,0:13:4.14:4,0,19	0/0:24,0:10:15.11:0,15,116	1/1:8,10:18:26.84:209,27,0	1/1:0,11:12:28.93:215,29,0	1/1:1,7:8:20.92:162,21,0	1/1:14,22:36:39.81:403,40,0	0/0:13,1:14:0.82:0,1,185	0/1:13,19:31:2.58:317,0,3	1/1:7,15:22:44.80:348,45,0	1/1:2,6:9:13.97:99,14,0	1/1:3,7:10:22.95:168,23,0	1/1:3,8:10:20.91:162,21,0	1/1:2,12:14:26.90:209,27,0	1/1:5,14:19:41.81:325,42,0	0/1:7,7:14:12.52:98,0,13	1/1:3,8:11:20.92:163,21,0	1/1:6,7:16:27:180,27,0	1/1:5,5:9:14.89:116,15,0	1/1:2,2:4:2.97:23,3,0	1/1:6,4:10:14.92:116,15,0	1/1:3,6:9:14.94:116,15,0	1/1:1,10:11:17.93:139,18,0	1/1:2,10:12:23.89:185,24,0	0/1:3,14:18:11.56:258,0,12	1/1:7,17:24:14.36:293,14,0	0/1:5,2:7:21.47:37,0,21
chr10	63078284	.	GA	G	3822.37	PASS	AC=50;AF=0.926;AN=54;BaseQRankSum=-2.836;DP=197;FS=0.000;HRun=2;HaplotypeScore=40.0976;InbreedingCoeff=0.3628;MQ=68.96;MQ0=8;MQRankSum=-4.179;QD=25.65;ReadPosRankSum=2.179;VQSLOD=3.3108;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,3:4:9.03:108,9,0	1/1:1,1:2:3.01:34,3,0	0/0:22,1:11:27.07:0,27,306	0/0:21,0:4:0.47:0,0,1	1/1:0,3:3:3.01:36,3,0	1/1:1,9:9:21.07:254,21,0	1/1:1,1:2:3.01:36,3,0	1/1:2,11:9:18.05:216,18,0	1/1:1,3:4:9.03:108,9,0	1/1:1,2:3:6.02:72,6,0	1/1:1,9:10:24.07:285,24,0	1/1:0,7:7:21.06:246,21,0	1/1:0,3:3:9.03:108,9,0	1/1:1,3:4:12.04:143,12,0	1/1:1,11:12:33.09:385,33,0	1/1:5,8:13:27.04:303,27,0	1/1:1,1:2:3.01:36,3,0	1/1:1,4:5:12.04:144,12,0	1/1:1,6:7:18.01:200,18,0	1/1:1,2:3:6.02:72,6,0	1/1:0,1:1:3.01:36,3,0	1/1:1,2:3:3.01:36,3,0	1/1:1,5:6:9.03:108,9,0	./.	1/1:3,2:5:9.03:108,9,0	1/1:2,9:11:27.08:322,27,0	1/1:1,8:9:24.07:285,24,0	1/1:3,4:7:12.04:144,12,0
chr10	63078605	.	G	GA	4545.11	PASS	AB=0.841;AC=45;AF=0.804;AN=56;BaseQRankSum=-0.360;DP=426;FS=4.393;HRun=12;HaplotypeScore=76.7397;InbreedingCoeff=-0.0023;MQ=40.89;MQ0=39;MQRankSum=0.052;QD=10.72;ReadPosRankSum=-0.978;VQSLOD=4.2817;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:29,7:32:10.53:398,11,0	1/1:3,0:2:2.84:14,3,0	0/0:2,0:1:2.98:0,3,22	0/1:5,0:3:0:0,0,0	1/1:10,6:13:18.03:175,18,0	1/1:17,6:22:14.08:276,14,0	0/1:9,3:11:1.71:173,0,2	1/1:16,4:21:35.03:247,35,0	1/1:11,0:15:31.11:172,31,0	0/1:13,4:18:3.41:128,0,3	0/1:5,3:8:3.96:108,0,4	1/1:6,5:11:2.50:132,3,0	0/1:18,0:18:52.01:150,0,52	1/1:7,2:8:9.01:85,9,0	1/1:12,8:19:34.81:303,35,0	1/1:9,10:18:42.01:394,42,0	1/1:17,5:27:28.62:302,29,0	1/1:9,0:11:11.46:61,11,0	1/1:8,7:12:5.02:185,5,0	1/1:9,4:12:12.01:111,12,0	0/1:7,0:4:12.89:49,0,13	1/1:6,3:6:5.96:49,6,0	1/1:7,5:8:12.02:117,12,0	1/1:7,11:17:21.02:198,21,0	1/1:5,5:10:15.02:146,15,0	0/1:17,5:19:7.74:245,0,8	0/1:15,8:19:4.85:252,0,5	0/1:4,3:5:7.73:76,0,8
chr10	63078622	.	CA	C	4224.69	PASS	AB=0.736;AC=44;AF=0.786;AN=56;BaseQRankSum=-1.906;DP=444;FS=4.776;HRun=12;HaplotypeScore=72.4136;InbreedingCoeff=0.6637;MQ=53.11;MQ0=32;MQRankSum=-1.226;QD=10.97;ReadPosRankSum=1.099;VQSLOD=4.5602;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:22,13:32:71.64:552,72,0	1/1:3,0:5:8.14:24,8,0	0/0:16,0:6:9.44:0,9,87	0/1:15,2:9:21.08:21,0,112	1/1:14,5:17:26.84:202,27,0	1/1:10,9:18:8.41:248,8,0	1/1:8,5:12:15.34:218,15,0	1/1:7,1:31:46.69:136,47,0	1/1:2,12:12:31.44:236,31,0	1/1:4,13:19:37.86:284,38,0	1/1:7,3:8:14.87:116,15,0	1/1:5,9:14:4.54:143,5,0	1/1:11,5:15:35.82:278,36,0	1/1:3,4:6:14.93:115,15,0	1/1:6,9:15:34.90:261,35,0	1/1:10,4:14:23.88:186,24,0	1/1:7,0:31:32.14:103,32,0	0/1:4,0:14:0.37:28,0,0	1/1:6,6:11:16.96:122,17,0	1/1:4,5:8:17.91:139,18,0	1/1:6,3:6:17.93:139,18,0	0/0:10,0:7:11.98:0,12,111	0/0:9,0:6:6.01:0,6,61	0/0:17,0:16:13.29:0,13,258	1/1:5,6:12:19.93:145,20,0	1/1:9,8:15:32.85:253,33,0	1/1:11,11:19:35.79:277,36,0	0/0:7,0:5:0:0,0,0
chr10	63081023	.	CCCACCA	C	14548.69	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=8.520;DP=554;FS=1.613;HRun=0;HaplotypeScore=120.7323;InbreedingCoeff=0.8895;MQ=55.54;MQ0=4;MQRankSum=-10.030;QD=33.91;ReadPosRankSum=3.411;VQSLOD=4.9162;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:13,24:38:54.18:1131,54,0	0/0:1,0:1:3.01:0,3,100	0/0:27,0:19:42.08:0,42,976	0/0:23,0:16:8.09:0,8,572	1/1:6,8:14:18.06:384,18,0	1/1:10,16:26:30.10:604,30,0	1/1:7,15:22:45.15:960,45,0	0/0:21,0:21:14.90:0,15,428	0/0:18,0:18:45.15:0,45,1463	1/1:5,6:11:18.06:384,18,0	1/1:2,7:8:15.05:319,15,0	1/1:13,23:35:57.20:1218,57,0	1/1:7,23:30:63.22:1346,63,0	1/1:5,18:23:45.15:961,45,0	1/1:4,29:33:75.06:1589,75,0	1/1:5,31:36:60.21:1282,60,0	0/0:21,0:21:54.19:0,54,1632	0/0:14,0:14:42.14:0,42,1359	1/1:5,6:11:21.06:406,21,0	1/1:5,7:11:9.03:192,9,0	1/1:12,15:27:17.89:296,18,0	1/1:5,5:10:12.04:255,12,0	1/1:2,4:6:10.72:210,11,0	1/1:10,17:27:27.53:578,28,0	1/1:3,12:15:30.10:641,30,0	1/1:3,10:13:33.11:703,33,0	1/1:3,20:23:48.16:1026,48,0	1/1:3,4:7:3.01:64,3,0
chr10	63081461	.	C	CT	1058.08	PASS	AB=0.874;AC=9;AF=0.167;AN=54;BaseQRankSum=-3.008;DP=444;FS=8.486;HRun=12;HaplotypeScore=59.8040;InbreedingCoeff=0.4397;MQ=67.62;MQ0=2;MQRankSum=-0.583;QD=9.04;ReadPosRankSum=-2.421;VQSLOD=1.5409;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:29:31.25:0,31,94	1/1:3,3:6:3.85:81,4,0	0/0:30,1:11:8.34:0,8,51	0/0:22,0:12:0.88:0,1,15	0/0:3,0:18:23.33:0,23,67	0/0:21,0:22:47.96:0,48,333	0/0:9,0:9:14.84:0,15,104	1/1:14,18:31:12.73:400,13,0	0/1:11,0:11:22.66:32,0,23	0/0:12,0:14:33.88:0,34,227	0/0:12,0:12:29.79:0,30,215	0/0:9,0:9:22.89:0,23,157	0/0:10,0:11:22.89:0,23,159	0/0:8,0:8:2.41:0,2,92	0/0:12,0:13:31.83:0,32,225	0/1:12,0:12:2.35:2,0,146	1/1:7,23:32:18.74:470,19,0	0/1:9,12:22:8.12:211,0,8	0/0:20,0:19:41.74:0,42,306	0/0:10,0:12:20.80:0,21,150	0/0:8,0:8:14.86:0,15,105	./.	0/0:3,0:3:8.95:0,9,66	0/0:7,0:7:5.94:0,6,44	0/0:20,1:21:27.49:0,27,364	0/0:22,0:22:21.07:0,21,319	0/0:20,0:24:45.80:0,46,316	0/0:11,0:11:0.72:0,1,168
chr10	63082089	.	GTAAA	G	354.14	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.635;DP=515;FS=5.446;HRun=0;HaplotypeScore=119.8947;InbreedingCoeff=0.9259;MQ=80.82;MQ0=0;MQRankSum=-2.321;QD=27.24;ReadPosRankSum=0.320;VQSLOD=3.2378;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:39.13:0,39,1038	0/0:12,0:12:33.11:0,33,880	0/0:20,0:19:51.15:0,51,1187	0/0:10,0:10:21.03:0,21,477	0/0:38,0:38:99:0,108,2804	0/0:16,0:16:45.15:0,45,1200	0/0:11,0:11:33.11:0,33,811	0/0:32,0:32:87.30:0,87,2177	1/1:1,12:13:24.08:447,24,0	0/0:27,0:27:78.27:0,78,1988	0/0:22,0:22:60.18:0,60,1397	0/0:25,0:25:72.23:0,72,1787	0/0:14,0:14:39.13:0,39,1040	0/0:20,0:20:57.20:0,57,1505	0/0:24,0:24:69.24:0,69,1763	0/0:14,0:14:39.13:0,39,1005	0/0:25,0:25:66.23:0,66,1751	0/0:11,0:11:24.08:0,24,578	0/0:10,0:10:30.10:0,30,800	0/0:18,0:18:51.18:0,51,1324	0/0:12,0:12:36.12:0,36,951	0/0:9,0:9:21.07:0,21,560	0/0:26,0:26:66.23:0,66,1753	0/0:6,0:6:18.04:0,18,417	0/0:24,0:24:72.21:0,72,1770	0/0:21,0:21:60.21:0,60,1517	0/0:30,0:30:84.27:0,84,2150	0/0:4,0:4:9.01:0,9,184
chr10	63082124	.	T	TA	843.51	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-1.857;DP=520;FS=0.634;HRun=11;HaplotypeScore=88.0981;InbreedingCoeff=0.8662;MQ=69.78;MQ0=0;MQRankSum=-0.178;QD=13.83;ReadPosRankSum=0.382;VQSLOD=3.8817;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,14:20:9.66:265,10,0	0/0:18,0:18:38.79:0,39,302	0/0:14,0:11:8.22:0,8,53	0/0:8,0:7:11:0,11,75	1/1:12,27:41:35.63:693,36,0	0/0:12,0:13:31.92:0,32,238	0/0:9,0:11:24.97:0,25,174	0/0:35,0:36:85.63:0,86,647	0/0:16,0:16:32.87:0,33,255	0/0:22,0:22:41.80:0,42,325	0/0:27,0:28:61.76:0,62,470	0/0:25,2:28:12.91:0,13,456	0/0:15,0:16:31.89:0,32,238	0/0:24,0:24:59.72:0,60,461	0/0:21,0:21:53.79:0,54,418	0/0:13,0:15:39.93:0,40,290	0/0:15,0:16:40.08:0,40,288	0/0:12,0:13:29.83:0,30,232	0/0:14,1:15:26.86:0,27,209	0/0:22,0:22:59.75:0,60,464	0/0:10,0:10:29.89:0,30,232	0/0:6,0:6:8.93:0,9,70	0/0:17,1:18:17.37:0,17,317	0/0:5,0:5:14.94:0,15,116	0/0:19,0:20:46.84:0,47,354	0/0:25,0:27:75.80:0,76,569	0/0:27,0:27:62.72:0,63,488	0/0:7,0:9:18.98:0,19,128
chr10	63082775	.	CA	C	3908.71	PASS	AB=0.726;AC=43;AF=0.768;AN=56;BaseQRankSum=-4.572;DP=536;FS=6.330;HRun=15;HaplotypeScore=69.6931;InbreedingCoeff=0.5687;MQ=70.92;MQ0=4;MQRankSum=1.131;QD=9.65;ReadPosRankSum=4.888;VQSLOD=3.0374;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,19:26:53.37:325,53,0	0/0:2,0:5:5.82:0,6,41	0/0:37,1:18:22.64:0,23,207	0/0:36,0:16:5.10:0,5,47	1/1:5,10:15:30.15:174,30,0	1/1:5,19:26:19.08:235,19,0	1/1:2,9:14:14.22:153,14,0	0/0:10,0:29:62.77:0,63,330	1/1:4,3:7:4.31:35,4,0	1/1:3,14:19:19.10:234,19,0	1/1:5,16:22:40.33:253,40,0	0/1:5,7:13:24.51:88,0,25	1/1:5,11:16:17.71:115,18,0	1/1:6,10:17:28.56:178,29,0	1/1:5,15:21:40.39:256,40,0	0/1:7,9:17:6.69:82,0,7	0/0:14,1:21:30.27:0,30,274	0/1:9,1:13:6.34:6,0,127	1/1:14,3:18:0.54:148,1,0	1/1:5,14:20:43.31:271,43,0	1/1:6,10:18:15.78:89,16,0	1/1:6,8:15:25.66:160,26,0	1/1:3,14:19:10.43:177,10,0	1/1:2,11:13:0.24:127,0,0	1/1:7,9:17:19.70:121,20,0	1/1:8,13:23:42.40:260,42,0	1/1:8,18:29:32.82:318,33,0	1/1:0,6:7:16.82:102,17,0
chr10	63082872	.	C	CA	1345.95	PASS	AB=0.877;AC=11;AF=0.196;AN=56;BaseQRankSum=-6.514;DP=552;FS=2.212;HRun=11;HaplotypeScore=61.4264;InbreedingCoeff=0.4583;MQ=57.58;MQ0=10;MQRankSum=-0.030;QD=8.47;ReadPosRankSum=-1.232;VQSLOD=2.1075;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:41,1:42:28.81:0,29,591	0/1:4,8:12:22.42:158,0,22	0/0:10,0:3:1.94:0,2,17	0/0:8,0:4:5.46:0,5,31	0/0:32,0:35:59.82:0,60,566	0/0:13,0:14:34.91:0,35,261	0/1:13,1:12:0.55:1,0,179	1/1:7,16:23:23.77:353,24,0	0/0:11,0:10:17.91:0,18,139	0/0:22,0:24:40.83:0,41,307	0/0:21,1:22:16.40:0,16,300	0/1:13,1:15:0.44:0,0,182	0/0:19,0:19:41.80:0,42,325	0/0:19,0:19:47.65:0,48,362	0/0:20,0:20:11.85:0,12,286	0/0:20,0:22:54.85:0,55,406	1/1:7,21:30:50.21:531,50,0	1/1:2,18:20:24.86:433,25,0	0/1:15,1:19:8.19:8,0,207	0/0:26,0:26:64.75:0,65,493	0/0:8,0:8:20.92:0,21,162	0/0:16,1:17:14.36:0,14,291	0/0:18,0:19:52.74:0,53,392	0/0:16,0:17:45.09:0,45,332	0/1:25,1:26:14.12:14,0,355	0/0:22,0:22:47.79:0,48,371	0/0:23,1:24:16.71:0,17,310	0/0:10,0:10:14.91:0,15,116
chr10	63083237	.	TG	T	1354.86	PASS	AB=0.954;AC=15;AF=0.268;AN=56;BaseQRankSum=7.854;DP=493;FS=1.556;HRun=11;HaplotypeScore=63.2308;InbreedingCoeff=0.3851;MQ=68.83;MQ0=0;MQRankSum=-0.407;QD=6.84;ReadPosRankSum=4.453;VQSLOD=1.6120;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,1:32:29.27:0,29,457	0/0:9,0:9:18:0,18,180	0/1:14,0:14:0.99:1,0,176	0/1:12,0:11:10.24:10,0,55	0/0:23,1:24:21.90:0,22,209	0/1:13,1:14:28.19:28,0,132	0/0:26,2:28:10.79:0,11,473	0/1:25,1:27:0.62:1,0,187	1/1:1,26:27:77.91:640,78,0	0/0:11,0:11:23.89:0,24,226	0/1:13,1:14:6.61:7,0,129	0/0:14,1:15:0.91:0,1,159	0/0:17,0:17:21.01:0,21,206	0/0:12,1:13:11.39:0,11,308	0/0:16,0:16:30.05:0,30,300	0/0:15,0:15:8.55:0,9,287	0/0:22,1:23:32.38:0,32,513	0/0:4,0:4:12.03:0,12,128	0/0:9,0:9:14.90:0,15,142	0/0:17,1:19:4.53:0,5,243	0/0:14,0:14:32.78:0,33,316	1/1:5,12:18:28.99:228,29,0	1/1:4,8:12:29.90:237,30,0	1/1:7,17:24:41.94:345,42,0	0/0:20,1:21:15.08:0,15,340	0/1:22,2:24:21.88:22,0,173	0/0:24,1:25:29.31:0,29,466	0/1:11,1:12:3.60:4,0,164
chr10	63083800	.	C	CATGTATGTATGT	32371.42	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-0.561;DP=784;FS=5.081;HRun=0;HaplotypeScore=266.0783;InbreedingCoeff=0.8536;MQ=59.78;MQ0=1;MQRankSum=-8.774;QD=47.40;ReadPosRankSum=-0.153;VQSLOD=3.6960;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:33:21.91:617,22,0	1/1:11,0:11:3.01:58,3,0	0/0:39,0:32:22.58:0,23,391	0/0:31,0:29:17.03:0,17,424	1/1:9,0:28:26.84:688,27,0	1/1:17,9:28:33.11:1928,33,0	1/1:28,2:30:21.07:1107,21,0	1/1:55,0:51:48.16:2121,48,0	0/0:30,0:30:75.26:0,75,2418	1/1:19,0:26:42.13:1680,42,0	1/1:12,0:15:15.05:702,15,0	1/1:11,9:21:39.09:2023,39,0	1/1:22,7:32:33.11:1921,33,0	1/1:11,7:18:21.07:1177,21,0	1/1:24,18:44:48.16:2692,48,0	1/1:23,17:42:48.64:2805,49,0	1/1:16,0:16:11.45:479,11,0	1/1:17,0:17:18.02:522,18,0	1/1:22,7:31:39.12:1735,39,0	1/1:22,8:31:24.08:1400,24,0	1/1:25,4:31:8.12:524,8,0	1/1:11,0:23:33.11:851,33,0	1/1:11,0:24:39.13:993,39,0	1/1:13,0:24:14.54:379,15,0	1/1:12,8:22:21.07:1227,21,0	1/1:21,5:28:36.12:1556,36,0	1/1:31,10:40:54.19:3010,54,0	1/1:8,0:10:5.98:177,6,0
chr10	63085652	.	G	GT	1159.90	PASS	AB=0.867;AC=39;AF=0.696;AN=56;BaseQRankSum=3.039;DP=438;FS=16.317;HRun=16;HaplotypeScore=67.8212;InbreedingCoeff=0.4972;MQ=71.85;MQ0=3;MQRankSum=-0.709;QD=3.56;ReadPosRankSum=1.048;VQSLOD=-0.7347;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:13,17:31:38.20:122,0,38	0/1:3,0:4:4.22:4,0,15	0/1:34,0:16:2.15:2,0,15	0/0:25,0:15:0.59:0,1,8	1/1:11,3:15:17.43:119,17,0	1/1:21,0:21:22.41:99,22,0	1/1:17,0:17:13.65:66,14,0	0/0:36,0:36:19.96:0,20,159	0/0:1,0:6:8.04:0,8,23	1/1:15,0:16:15.95:82,16,0	1/1:9,0:9:16.36:71,16,0	1/1:10,0:10:11.09:51,11,0	1/1:8,0:8:13.44:55,13,0	1/1:9,0:9:13.39:54,13,0	1/1:10,0:10:8.33:38,8,0	1/1:13,0:13:19.88:81,20,0	0/0:15,0:15:26.91:0,27,143	0/0:17,0:19:30.10:0,30,158	1/1:22,0:24:19.55:104,20,0	1/1:11,0:11:10.02:73,10,0	1/1:18,0:18:6.91:43,7,0	0/0:8,0:10:7.60:0,8,38	0/1:7,3:10:28.64:29,0,51	0/1:13,1:14:28.94:29,0,37	1/1:15,0:16:15.49:93,15,0	1/1:14,0:13:12.96:55,13,0	1/1:13,0:14:6.99:38,7,0	1/1:5,0:5:8.04:34,8,0
chr10	63085665	.	T	TTG	4357.58	PASS	AB=0.789;AC=34;AF=0.607;AN=56;BaseQRankSum=-8.143;DP=417;FS=26.369;HRun=0;HaplotypeScore=57.7495;InbreedingCoeff=0.8108;MQ=64.36;MQ0=4;MQRankSum=2.461;QD=18.08;ReadPosRankSum=5.362;VQSLOD=2.9782;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:37.63:0,38,366	0/0:4,0:4:6.41:0,6,86	0/0:36,0:13:18.93:0,19,180	0/1:27,0:14:0.47:0,0,126	0/0:15,0:15:32.44:0,32,318	1/1:0,12:16:30.09:405,30,0	0/1:3,6:11:1.90:223,0,2	0/0:28,0:28:76.29:0,76,716	1/1:6,0:6:0.50:25,0,0	1/1:3,12:14:29.89:416,30,0	1/1:1,8:10:23.50:277,23,0	1/1:2,2:9:11.89:146,12,0	1/1:0,5:8:14.37:131,14,0	1/1:1,9:10:14.98:227,15,0	1/1:2,7:10:7.75:74,8,0	1/1:3,10:14:16.51:294,17,0	0/0:18,0:17:44.98:0,45,449	0/0:18,0:18:47.94:0,48,473	1/1:8,12:22:8.89:415,9,0	1/1:2,10:12:27.72:393,28,0	1/1:4,14:20:15.29:277,15,0	0/0:8,0:8:23.94:0,24,224	0/0:9,0:9:23.26:0,23,213	0/0:12,0:12:32.81:0,33,304	1/1:6,8:16:35.86:494,36,0	1/1:6,9:15:27.89:249,28,0	1/1:1,9:10:6.12:174,6,0	1/1:0,6:6:9.03:137,9,0
chr10	63087670	.	CATATATATATATATATATATATAT	C	9894.14	PASS	AB=0.707;AC=40;AF=0.800;AN=50;BaseQRankSum=4.083;DP=323;FS=15.911;HRun=0;HaplotypeScore=178.5501;InbreedingCoeff=0.3270;MQ=65.97;MQ0=1;MQRankSum=-3.795;QD=41.05;ReadPosRankSum=1.705;VQSLOD=2.4153;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:11,9:17:3.01:151,3,0	0/1:1,0:4:16.19:128,0,16	./.	0/0:13,0:8:1.82:0,2,5	1/1:1,12:14:2.30:189,2,0	1/1:3,9:13:6.02:229,6,0	./.	0/0:35,0:39:45.14:0,45,915	./.	1/1:6,5:11:27.09:1377,27,0	1/1:2,5:8:12.04:646,12,0	1/1:4,8:12:15.05:887,15,0	1/1:3,6:9:12.04:609,12,0	1/1:3,2:5:3.01:149,3,0	1/1:3,11:14:12.04:677,12,0	1/1:3,5:8:6.02:365,6,0	0/1:13,0:16:28.24:117,0,28	0/0:4,0:5:9.03:0,9,142	1/1:9,1:10:9.02:346,9,0	1/1:5,19:25:15.05:638,15,0	1/1:9,0:8:3:25,3,0	1/1:3,7:11:6.02:313,6,0	1/1:3,4:7:3.01:146,3,0	0/0:1,5:6:0:0,0,0	1/1:1,10:11:12.04:611,12,0	1/1:3,14:17:36.10:1788,36,0	1/1:4,9:13:9.03:454,9,0	1/1:4,0:3:3.01:49,3,0
chr10	63087765	.	G	GTTTTA	8910.45	PASS	AB=0.906;AC=46;AF=0.885;AN=52;BaseQRankSum=-3.809;DP=386;FS=12.151;HRun=0;HaplotypeScore=103.0925;InbreedingCoeff=0.1612;MQ=72.75;MQ0=6;MQRankSum=-0.009;QD=24.89;ReadPosRankSum=0.724;VQSLOD=3.8401;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:19,0:18:56.03:72,0,56	1/1:1,4:5:11.87:267,12,0	0/0:23,0:10:8.56:0,9,140	0/1:52,0:26:2.14:2,0,16	0/1:17,0:17:31.51:53,0,32	1/1:9,1:10:15.03:299,15,0	1/1:4,0:4:3:25,3,0	1/1:29,22:54:77.70:942,78,0	1/1:2,0:2:2.96:19,3,0	1/1:6,10:16:33.08:742,33,0	1/1:6,8:14:27:552,27,0	./.	1/1:1,2:3:3.01:84,3,0	1/1:2,1:3:3.01:84,3,0	1/1:6,1:7:6.01:109,6,0	1/1:3,3:6:9.03:253,9,0	1/1:11,20:32:48.16:1319,48,0	1/1:3,9:12:14.84:351,15,0	1/1:6,10:17:36.07:881,36,0	1/1:7,1:8:3.01:84,3,0	1/1:4,3:6:15.03:275,15,0	./.	1/1:6,0:7:9.42:126,9,0	1/1:3,0:3:3.01:33,3,0	1/1:14,3:17:29.98:566,30,0	1/1:11,7:18:36.10:788,36,0	1/1:10,4:14:24.08:580,24,0	0/1:4,6:10:2.51:404,0,3
chr10	63087789	.	TA	T	423.97	PASS	AB=0.979;AC=6;AF=0.107;AN=56;BaseQRankSum=3.451;DP=381;FS=1.410;HRun=1;HaplotypeScore=75.6041;InbreedingCoeff=0.5014;MQ=61.18;MQ0=21;MQRankSum=-0.490;QD=4.87;ReadPosRankSum=-2.925;VQSLOD=-0.7352;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:16:25.46:150,25,0	0/0:4,0:4:11.83:0,12,77	0/0:27,0:7:14.84:0,15,141	0/1:43,2:16:33.22:33,0,49	1/1:17,3:20:54.23:363,54,0	0/0:11,0:11:26.87:0,27,269	0/0:6,0:5:15.03:0,15,177	0/0:42,0:40:99:0,119,1132	0/0:4,0:4:12.02:0,12,137	0/0:15,0:15:44.78:0,45,377	0/0:15,0:15:44.90:0,45,442	0/0:6,0:6:18.03:0,18,208	0/0:3,0:3:5.98:0,6,59	0/0:2,0:2:5.98:0,6,60	0/0:4,0:4:12:0,12,135	0/0:5,0:5:9.46:0,9,81	0/0:29,0:29:66.81:0,67,549	0/0:18,0:18:18.79:0,19,371	0/0:21,0:20:52.60:0,53,502	0/0:9,0:9:23.79:0,24,235	0/0:9,0:9:26.98:0,27,303	0/1:4,0:4:12.43:12,0,92	0/0:6,0:6:18:0,18,200	0/0:1,0:1:3.01:0,3,39	0/0:13,0:13:38.91:0,39,361	0/0:19,0:19:56.79:0,57,536	0/0:13,0:13:38.93:0,39,402	0/0:12,0:12:28.29:0,28,277
chr10	63089211	.	CCCCCA	C	13091.32	PASS	AB=1.000;AC=45;AF=0.804;AN=56;BaseQRankSum=3.401;DP=376;FS=1.623;HRun=0;HaplotypeScore=85.4658;InbreedingCoeff=0.9017;MQ=77.18;MQ0=1;MQRankSum=-3.711;QD=38.85;ReadPosRankSum=2.331;VQSLOD=4.3549;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,18:22:45.15:847,45,0	0/0:3,0:3:9.03:0,9,264	0/0:13,0:11:16.74:0,17,286	0/1:16,0:15:0.79:1,0,231	1/1:5,13:18:42.14:801,42,0	1/1:3,12:15:30.10:573,30,0	1/1:2,8:10:24.08:465,24,0	0/0:12,0:12:18.06:0,18,464	1/1:2,9:11:24.08:465,24,0	1/1:3,7:10:24.08:451,24,0	1/1:4,7:11:27.09:522,27,0	1/1:4,11:15:27.09:523,27,0	1/1:4,17:21:42.14:813,42,0	1/1:0,8:8:21.07:407,21,0	1/1:4,19:23:54.19:1046,54,0	1/1:3,10:13:24.08:465,24,0	0/0:7,0:7:15.04:0,15,363	0/0:4,0:4:12.02:0,12,288	1/1:2,7:9:20.86:361,21,0	1/1:2,5:7:15.05:290,15,0	1/1:4,19:23:48.16:923,48,0	1/1:3,8:11:21.07:402,21,0	1/1:6,6:12:18.06:348,18,0	1/1:4,18:22:36.12:697,36,0	1/1:3,11:14:33.11:639,33,0	1/1:1,18:19:54.17:1006,54,0	1/1:2,12:14:36.12:697,36,0	1/1:6,6:12:18.06:349,18,0
chr10	63089215	.	CA	C	1351.89	PASS	AB=0.994;AC=29;AF=0.518;AN=56;BaseQRankSum=10.040;DP=353;FS=1.004;HRun=1;HaplotypeScore=96.3476;InbreedingCoeff=-0.2014;MQ=74.97;MQ0=1;MQRankSum=-2.941;QD=4.35;ReadPosRankSum=8.949;VQSLOD=-0.2162;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:20,1:21:25.98:87,0,26	0/0:3,0:3:9.03:0,9,126	0/1:11,0:9:8.62:9,0,221	0/0:17,0:15:25.01:0,25,257	0/1:17,1:18:9.74:84,0,10	0/1:14,0:14:35:57,0,35	0/1:12,0:12:28.94:71,0,29	0/0:11,0:11:33.05:0,33,395	0/1:11,0:11:37.92:50,0,38	1/1:8,0:8:15.81:63,16,0	1/1:9,2:11:2.37:63,2,0	1/1:12,0:12:23.37:86,23,0	0/1:20,0:20:45.48:89,0,45	1/1:8,0:8:18.17:67,18,0	0/1:23,0:23:51.90:116,0,52	0/1:11,0:11:1.23:53,0,1	0/0:7,0:7:20.93:0,21,243	0/0:4,0:4:12.03:0,12,153	0/1:9,0:9:42.30:46,0,42	0/1:6,0:6:25.66:32,0,26	1/1:20,0:20:1.54:105,2,0	0/1:11,0:11:36:36,0,90	0/1:11,0:11:30.21:30,0,98	0/1:19,0:19:7.55:80,0,8	1/1:12,0:12:6.66:80,7,0	0/1:19,0:19:1:107,0,1	0/1:13,0:13:7.48:80,0,7	0/1:11,0:11:26.62:27,0,163
chr10	63089222	.	CCCCA	C	3995.78	PASS	AB=0.980;AC=30;AF=0.536;AN=56;BaseQRankSum=9.508;DP=369;FS=33.103;HRun=0;HaplotypeScore=109.4708;InbreedingCoeff=-0.1624;MQ=77.88;MQ0=1;MQRankSum=-2.171;QD=12.26;ReadPosRankSum=10.229;VQSLOD=1.0193;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:23,1:24:93.70:241,0,94	0/0:3,0:3:9.03:0,9,247	0/0:15,0:13:13.02:0,13,451	0/1:18,0:17:6.74:7,0,446	1/1:15,1:16:7.42:249,7,0	0/1:15,0:15:38.69:167,0,39	0/1:12,0:12:50.91:135,0,51	0/0:14,0:14:30.10:0,30,636	1/1:9,0:9:23.81:167,24,0	0/1:8,1:9:10.97:132,0,11	0/1:12,1:13:75.65:153,0,76	0/1:14,1:15:75.78:153,0,76	1/1:18,0:18:7.48:256,7,0	1/1:8,0:8:20.83:147,21,0	0/1:23,1:24:83.08:312,0,83	0/1:11,0:11:10.30:141,0,10	0/0:7,0:7:18.05:0,18,384	0/0:4,0:4:12.03:0,12,271	0/1:10,0:10:95.66:96,0,104	0/1:7,0:7:53.46:84,0,53	0/1:23,0:23:54.46:272,0,54	1/1:9,0:9:20.76:142,21,0	1/1:9,0:9:17.86:127,18,0	1/1:20,0:20:1.53:214,2,0	0/1:12,0:12:1.45:195,0,1	0/1:20,0:20:17.54:293,0,18	0/1:14,0:14:32.58:210,0,33	0/1:9,0:9:16.29:105,0,16
chr10	63089521	.	TTA	T	254.66	PASS	AB=0.911;AC=5;AF=0.089;AN=56;BaseQRankSum=3.804;DP=509;FS=6.218;HRun=0;HaplotypeScore=81.7273;InbreedingCoeff=-0.0661;MQ=72.40;MQ0=10;MQRankSum=0.291;QD=2.86;ReadPosRankSum=-1.378;VQSLOD=1.0548;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,99,856	0/0:6,0:6:12.04:0,12,175	0/1:41,0:15:23.54:24,0,112	0/0:39,0:15:14.74:0,15,135	0/0:18,0:18:52.97:0,53,390	0/0:16,0:16:48.06:0,48,669	0/0:15,0:15:41.84:0,42,509	0/0:29,0:29:71.31:0,71,916	0/1:12,0:12:14.52:15,0,47	0/0:29,0:29:69.03:0,69,1049	0/0:15,0:15:29.70:0,30,454	0/0:18,0:18:50.98:0,51,633	0/0:8,0:8:23.95:0,24,270	0/0:10,0:10:17.68:0,18,226	0/0:10,0:10:30.01:0,30,408	0/0:14,0:14:27.55:0,28,406	0/0:14,0:14:26.45:0,26,209	0/0:20,0:20:45.08:0,45,537	0/0:20,0:20:39.52:0,40,628	0/0:11,0:11:29.71:0,30,290	0/0:7,0:7:17.79:0,18,147	0/1:12,2:14:11.56:155,0,12	0/1:12,1:13:23.18:57,0,23	0/1:6,3:9:18.42:121,0,18	0/0:15,0:15:44.77:0,45,542	0/0:18,0:18:37.01:0,37,629	0/0:23,0:23:63.09:0,63,788	0/0:22,0:22:59.49:0,59,631
chr10	63089522	.	TA	T	643.63	PASS	AB=1.000;AC=10;AF=0.179;AN=56;BaseQRankSum=3.487;DP=499;FS=0.000;HRun=6;HaplotypeScore=71.3018;InbreedingCoeff=0.7238;MQ=72.70;MQ0=10;MQRankSum=-0.364;QD=6.44;ReadPosRankSum=-0.316;VQSLOD=-0.3852;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,115,1033	0/0:6,0:6:12:0,12,117	0/1:40,0:15:20.56:21,0,86	0/0:38,1:15:12.52:0,13,95	0/0:17,0:18:51.96:0,52,414	0/0:16,0:16:45.06:0,45,474	0/0:14,0:14:35.93:0,36,336	0/0:29,0:29:73.59:0,74,637	1/1:12,0:12:20.90:153,21,0	0/0:29,0:29:68.80:0,69,705	0/0:15,0:15:30.15:0,30,297	0/0:17,0:17:39.05:0,39,404	0/0:8,0:8:20.60:0,21,184	0/0:10,0:10:16.77:0,17,143	0/0:10,0:10:24.04:0,24,261	0/1:13,0:13:20.69:21,0,226	0/0:12,0:12:10.14:0,10,127	0/0:19,0:19:44.93:0,45,395	0/0:20,0:20:48.45:0,48,435	0/0:10,0:10:17.07:0,17,171	0/0:7,0:7:12.59:0,13,94	1/1:10,4:14:34.41:278,34,0	1/1:2,10:12:20.52:178,21,0	1/1:7,2:9:20.83:161,21,0	0/0:15,0:15:35.57:0,36,342	0/0:19,0:19:50.72:0,51,492	0/0:22,0:22:59.98:0,60,588	0/0:22,0:22:38.56:0,39,378
chr10	63091408	.	TA	T	846.95	PASS	AB=0.889;AC=7;AF=0.125;AN=56;BaseQRankSum=6.679;DP=487;FS=6.489;HRun=10;HaplotypeScore=52.1339;InbreedingCoeff=0.7995;MQ=65.66;MQ0=1;MQRankSum=0.603;QD=14.12;ReadPosRankSum=-0.882;VQSLOD=3.1423;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,1:34:56.11:0,56,926	0/0:9,0:9:24.02:0,24,253	0/0:9,0:9:23.97:0,24,236	0/0:9,0:8:7.60:0,8,87	0/0:32,0:32:83.42:0,83,890	0/0:19,1:20:28.09:0,28,538	0/0:8,0:8:18.05:0,18,199	0/0:26,2:28:8.18:0,8,531	0/1:14,2:16:9.99:10,0,356	0/0:41,0:40:99:0,108,1159	0/0:22,1:24:33.96:0,34,585	0/0:1,0:10:19.89:0,20,99	0/0:11,0:11:29.98:0,30,306	0/0:9,0:9:24.05:0,24,258	0/0:14,0:14:42.11:0,42,465	0/0:11,0:11:33.07:0,33,354	0/0:26,0:26:61.20:0,61,723	0/0:11,0:10:29.99:0,30,305	0/0:16,0:16:48.13:0,48,531	0/0:26,0:26:60.13:0,60,640	0/0:6,0:6:18.05:0,18,199	1/1:2,16:18:44.99:391,45,0	1/1:0,19:19:50.96:436,51,0	1/1:0,7:7:18:156,18,0	0/0:26,0:26:66.17:0,66,723	0/0:14,0:14:42.11:0,42,458	0/0:19,0:18:57.11:0,57,603	0/0:14,0:14:33.15:0,33,393
chr10	63092591	.	AGTGTGT	A	278.27	PASS	AB=0.885;AC=7;AF=0.130;AN=54;BaseQRankSum=4.453;DP=596;FS=8.589;HRun=0;HaplotypeScore=130.5106;InbreedingCoeff=0.5092;MQ=61.39;MQ0=21;MQRankSum=-3.923;QD=3.35;ReadPosRankSum=1.916;VQSLOD=2.1178;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:35:33.56:0,34,694	0/0:6,0:6:6.02:0,6,167	./.	0/0:35,0:18:0:0,0,0	0/0:8,0:7:6.02:0,6,138	0/0:24,0:24:27.05:0,27,581	0/0:18,0:24:9.03:0,9,248	0/0:23,0:19:5.97:0,6,59	1/1:10,0:17:12.04:167,12,0	0/0:30,0:28:21.87:0,22,365	0/0:17,0:16:18.06:0,18,354	0/0:13,0:12:12.04:0,12,185	0/0:17,0:17:15:0,15,271	0/0:19,0:19:21.07:0,21,596	0/0:16,0:16:15.05:0,15,352	0/0:21,0:22:29.71:0,30,805	0/0:21,0:27:3.01:0,3,78	0/0:10,0:10:3.01:0,3,63	0/0:20,0:19:15.05:0,15,332	0/0:16,0:16:6.02:0,6,110	0/0:47,0:51:45.61:0,46,979	1/1:12,11:22:6.32:121,6,0	1/1:16,1:17:2.68:60,3,0	0/1:20,3:21:54.09:54,0,56	0/0:17,0:18:21.07:0,21,581	0/0:26,0:27:30.56:0,31,629	0/0:20,0:19:21.01:0,21,431	0/0:11,0:11:15.04:0,15,247
chr10	63095393	.	A	ACAT	2706.18	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-7.699;DP=643;FS=0.577;HRun=0;HaplotypeScore=86.1583;InbreedingCoeff=0.9987;MQ=82.47;MQ0=0;MQRankSum=-0.705;QD=48.32;ReadPosRankSum=2.074;VQSLOD=5.7118;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:81.26:0,81,1209	0/0:9,0:9:24.08:0,24,362	0/0:22,0:22:50.35:0,50,783	0/0:24,0:24:54.18:0,54,812	0/0:25,0:25:63.16:0,63,911	0/0:29,0:29:78.25:0,78,1165	0/0:17,0:17:48.15:0,48,707	0/0:32,0:32:81.27:0,81,1212	0/0:27,0:27:72.22:0,72,1051	0/0:21,0:21:39.13:0,39,593	0/0:20,0:20:48.16:0,48,729	0/0:10,0:10:27.09:0,27,405	0/0:25,0:25:66.21:0,66,976	0/0:24,0:24:72.24:0,72,1091	0/0:28,0:28:78.26:0,78,1180	0/0:20,0:20:54.18:0,54,819	0/0:34,0:34:87.30:0,87,1322	0/0:21,0:21:48.16:0,48,719	0/0:30,0:30:66.21:0,66,978	0/0:15,0:15:33.06:0,33,453	0/0:27,0:27:78.25:0,78,1163	1/1:4,14:18:39.13:826,39,0	1/1:2,17:19:54.19:1133,54,0	1/1:0,18:19:42.14:890,42,0	0/0:21,0:21:63.19:0,63,935	0/0:33,0:33:84.28:0,84,1258	0/0:31,0:31:87.28:0,87,1300	0/0:15,0:15:42.13:0,42,616
chr10	63096021	.	ATATTTATT	A	7043.84	PASS	AB=0.923;AC=47;AF=0.940;AN=50;BaseQRankSum=-2.856;DP=274;FS=10.916;HRun=0;HaplotypeScore=77.3534;InbreedingCoeff=0.1421;MQ=56.16;MQ0=0;MQRankSum=-0.952;QD=26.78;ReadPosRankSum=0.048;VQSLOD=2.8866;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,5:15:12:245,12,0	1/1:1,3:4:9.03:228,9,0	./.	0/0:3,0:2:2.80:0,3,13	1/1:7,5:12:15.05:341,15,0	1/1:9,14:23:36.12:892,36,0	1/1:4,2:6:3.01:76,3,0	1/1:10,15:25:45.14:891,45,0	1/1:2,0:7:11.87:182,12,0	1/1:5,3:8:9.03:229,9,0	1/1:9,4:13:6.02:152,6,0	1/1:2,5:7:15.05:381,15,0	1/1:1,3:4:9.03:229,9,0	1/1:5,1:6:3.01:72,3,0	1/1:2,5:7:12.04:281,12,0	1/1:6,2:9:9.03:203,9,0	1/1:7,10:17:21.07:508,21,0	0/1:11,1:12:67.22:67,0,100	1/1:10,4:14:12.02:252,12,0	1/1:5,3:8:9.03:229,9,0	./.	./.	1/1:4,2:6:3.01:51,3,0	1/1:1,1:2:3.01:76,3,0	1/1:9,7:16:12.04:305,12,0	1/1:8,8:16:24.06:555,24,0	1/1:5,11:16:21.07:522,21,0	1/1:8,2:10:3.01:76,3,0
chr10	63096120	.	CAAAT	C	1963.27	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.931;DP=473;FS=1.504;HRun=0;HaplotypeScore=77.4545;InbreedingCoeff=0.9877;MQ=78.03;MQ0=0;MQRankSum=-3.642;QD=40.07;ReadPosRankSum=0.687;VQSLOD=3.5472;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,22:22:54.12:952,54,0	0/0:5,0:5:15.05:0,15,396	0/0:13,0:13:27.08:0,27,641	0/0:12,0:12:29.13:0,29,633	1/1:1,26:27:66.01:1133,66,0	0/0:33,0:33:96.32:0,96,2423	0/0:11,0:11:33.11:0,33,867	0/0:27,0:27:72.24:0,72,1766	0/0:12,0:12:30.10:0,30,792	0/0:21,0:21:63.21:0,63,1589	0/0:19,0:18:51.18:0,51,1347	0/0:19,0:19:57.20:0,57,1505	0/0:18,0:18:54.19:0,54,1405	0/0:11,0:11:33.11:0,33,871	0/0:17,0:17:51.18:0,51,1347	0/0:18,0:18:54.19:0,54,1426	0/0:23,0:23:63.22:0,63,1661	0/0:10,0:10:30.10:0,30,761	0/0:19,0:19:45.09:0,45,1034	0/0:16,0:16:48.16:0,48,1267	0/0:8,0:8:21.07:0,21,554	0/0:22,0:22:63.22:0,63,1663	0/0:15,0:15:42.14:0,42,1107	0/0:10,0:10:30.10:0,30,792	0/0:18,0:18:48.16:0,48,1267	0/0:17,0:17:48.16:0,48,1215	0/0:20,0:20:51.18:0,51,1346	0/0:10,0:10:30.10:0,30,751
chr10	63098054	.	C	CT	1979.18	PASS	AB=0.726;AC=27;AF=0.482;AN=56;BaseQRankSum=-4.796;DP=477;FS=0.493;HRun=14;HaplotypeScore=84.1549;InbreedingCoeff=0.5664;MQ=69.15;MQ0=9;MQRankSum=-2.248;QD=7.47;ReadPosRankSum=-1.944;VQSLOD=2.4099;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:27:38.62:0,39,134	0/0:2,0:9:8.01:0,8,23	0/0:24,0:12:5.02:0,5,26	0/0:18,1:12:4.89:0,5,25	0/0:5,0:24:28.47:0,28,82	0/1:13,7:20:1.27:114,0,1	0/1:12,8:22:51.17:77,0,51	0/0:8,0:23:31.60:0,32,94	0/0:4,0:8:3.60:0,4,17	0/1:10,7:18:11.68:140,0,12	1/1:5,7:12:20.03:163,20,0	1/1:6,7:14:14.09:142,14,0	1/1:13,2:15:10.14:121,10,0	1/1:9,1:10:16.95:123,17,0	1/1:5,6:11:11.95:98,12,0	1/1:13,9:22:21.38:185,21,0	0/0:10,0:22:26.03:0,26,95	0/0:3,0:10:7.88:0,8,23	1/1:11,8:18:21.14:158,21,0	1/1:14,13:27:19.06:253,19,0	0/1:13,5:17:20.32:88,0,20	0/0:8,0:8:11.74:0,12,77	0/0:11,0:11:20.59:0,21,133	0/0:25,0:24:47.18:0,47,307	1/1:2,6:8:9:79,9,0	0/1:10,8:18:7.04:198,0,7	1/1:9,4:13:4.88:21,5,0	1/1:5,11:16:26.80:218,27,0
chr10	63098733	.	C	CATTTTAAAGCTGCCACCAGA	121923.36	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=-0.487;DP=769;FS=14.654;HRun=0;HaplotypeScore=347.4424;InbreedingCoeff=0.9929;MQ=78.34;MQ0=0;MQRankSum=-18.178;QD=199.87;ReadPosRankSum=4.693;VQSLOD=4.2177;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:29,11:45:99:8833,111,0	0/0:14,0:14:42.14:0,42,2031	0/0:29,0:29:78.27:0,78,3211	0/0:31,0:31:90.13:0,90,3688	1/1:25,9:34:87.17:5671,87,0	1/1:20,9:31:81.28:7106,81,0	1/1:26,4:32:84.24:6072,84,0	0/0:19,0:19:51.18:0,51,2568	0/0:33,0:33:99:0,99,4808	1/1:30,11:45:99:9944,132,0	1/1:14,7:25:63.17:4734,63,0	1/1:18,11:31:81.23:6561,81,0	1/1:20,10:37:99:7817,99,0	1/1:19,9:30:81.28:6666,81,0	1/1:23,5:30:69.24:4805,69,0	1/1:26,6:34:96.26:7693,96,0	0/0:25,0:25:72.25:0,72,3672	0/0:8,0:8:21.05:0,21,946	1/1:16,2:18:48.10:2918,48,0	1/1:7,6:15:42.11:3227,42,0	1/1:8,1:12:21.07:1345,21,0	1/1:24,9:36:99:7357,102,0	1/1:16,8:26:66.18:5045,66,0	1/1:9,0:9:12.02:626,12,0	1/1:15,3:20:51.18:3602,51,0	1/1:23,8:37:99:8189,111,0	1/1:26,18:44:99:10751,126,0	1/1:9,6:15:39.10:2961,39,0
chr10	63099238	.	T	TA	301.70	PASS	AB=0.632;AC=5;AF=0.089;AN=56;BaseQRankSum=-3.367;DP=471;FS=5.046;HRun=0;HaplotypeScore=88.1516;InbreedingCoeff=0.7122;MQ=73.59;MQ0=0;MQRankSum=0.540;QD=12.57;ReadPosRankSum=0.098;VQSLOD=3.9488;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:42.40:0,42,215	0/0:5,0:5:11.78:0,12,72	0/0:14,0:11:26.80:0,27,289	0/0:12,0:12:28.94:0,29,313	0/0:22,0:22:58.68:0,59,381	0/0:20,0:19:32.81:0,33,195	0/0:8,0:8:19.91:0,20,155	0/0:49,0:49:99:0,144,1276	0/0:14,0:14:31.45:0,31,217	0/0:20,0:20:56.33:0,56,436	0/0:18,0:18:35.56:0,36,252	0/0:16,0:16:27.88:0,28,168	0/0:13,0:13:32.64:0,33,225	0/0:7,0:7:17.87:0,18,161	0/0:14,0:14:25.59:0,26,184	0/0:13,0:13:32.61:0,33,217	0/0:27,0:26:43.56:0,44,258	0/0:15,0:15:31.69:0,32,192	0/0:14,0:14:37.38:0,37,273	0/0:24,0:24:61.44:0,61,508	0/0:3,0:3:8.39:0,8,87	1/1:0,3:3:8.87:65,9,0	1/1:0,9:9:15.51:157,16,0	0/1:5,7:11:14.62:200,0,15	0/0:28,0:28:71.41:0,71,514	0/0:28,0:27:77.36:0,77,587	0/0:32,0:32:76.68:0,77,493	0/0:11,0:11:23.73:0,24,195
chr10	63099239	.	T	TA	10086.60	PASS	AB=0.619;AC=49;AF=0.875;AN=56;BaseQRankSum=-6.729;DP=472;FS=2.844;HRun=9;HaplotypeScore=53.9573;InbreedingCoeff=0.4801;MQ=73.78;MQ0=0;MQRankSum=-1.681;QD=22.62;ReadPosRankSum=4.649;VQSLOD=5.5379;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,20:20:48.08:516,48,0	1/1:0,5:5:12.03:133,12,0	0/0:13,0:11:16.71:0,17,117	0/0:13,0:12:19.17:0,19,128	1/1:4,18:22:57.02:599,57,0	1/1:1,18:18:36.10:398,36,0	1/1:2,5:7:15.04:166,15,0	0/1:17,31:48:18.28:858,0,18	1/1:4,11:15:30.08:332,30,0	1/1:7,15:22:51.12:551,51,0	1/1:4,13:17:13.10:342,13,0	1/1:4,12:16:30.08:332,30,0	1/1:3,10:13:32.96:353,33,0	0/1:2,5:7:11.01:118,0,11	1/1:3,11:14:24.06:265,24,0	1/1:1,13:14:33.09:365,33,0	1/1:3,24:26:54.15:597,54,0	1/1:3,13:16:30.08:332,30,0	1/1:1,13:14:39.09:423,39,0	1/1:6,17:23:22.26:428,22,0	0/1:2,2:4:20.02:27,0,20	1/1:4,0:4:8.94:73,9,0	1/1:9,0:9:15.51:167,16,0	1/1:12,0:11:21.06:232,21,0	1/1:4,24:28:60.39:725,60,0	1/1:4,23:27:69.17:755,69,0	1/1:4,28:32:78.04:832,78,0	1/1:4,7:11:15.04:166,15,0
chr10	63101527	.	GT	G	1904.67	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=8.361;DP=565;FS=0.893;HRun=10;HaplotypeScore=60.6358;InbreedingCoeff=0.9679;MQ=72.75;MQ0=1;MQRankSum=-2.601;QD=19.24;ReadPosRankSum=1.330;VQSLOD=4.5020;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:31:67.63:0,68,807	1/1:1,9:10:18.70:178,19,0	0/0:17,0:13:9.84:0,10,323	0/0:17,0:16:29.61:0,30,283	0/0:33,0:33:64.44:0,64,912	0/0:22,0:22:44.10:0,44,632	0/0:9,0:9:24.06:0,24,265	1/1:4,17:21:50.94:436,51,0	1/1:1,15:16:41.99:365,42,0	0/0:27,1:29:37.80:0,38,590	0/0:20,0:20:48.12:0,48,524	0/0:17,0:17:45.12:0,45,498	0/0:15,0:15:39.09:0,39,421	0/0:26,1:27:34.09:0,34,589	0/0:21,1:22:40.10:0,40,655	0/0:11,0:11:31.33:0,31,335	1/1:2,31:32:74.98:651,75,0	1/1:0,18:19:53.03:449,53,0	0/0:19,0:19:22.10:0,22,463	0/0:26,0:26:69.19:0,69,763	0/0:21,0:22:53.95:0,54,561	0/0:21,0:21:48:0,48,494	0/0:19,0:19:48.12:0,48,521	0/0:12,1:13:10.07:0,10,339	0/0:13,0:13:39.11:0,39,431	0/0:25,0:26:56.96:0,57,589	0/0:33,0:33:87.21:0,87,938	0/0:4,0:4:12.03:0,12,133
chr10	63101626	.	A	AT	3884.79	PASS	AB=0.649;AC=33;AF=0.589;AN=56;BaseQRankSum=-7.411;DP=525;FS=7.048;HRun=15;HaplotypeScore=61.2357;InbreedingCoeff=0.2612;MQ=78.73;MQ0=4;MQRankSum=-2.139;QD=9.66;ReadPosRankSum=1.815;VQSLOD=3.0141;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:12,25:40:27.41:344,0,27	0/0:1,0:2:2.04:0,2,6	0/0:37,0:22:17.28:0,17,92	0/0:13,0:8:5.04:0,5,30	1/1:8,19:29:52.51:426,53,0	1/1:2,14:16:10.40:185,10,0	0/1:9,8:18:11.23:94,0,11	0/0:9,0:23:32.43:0,32,112	0/0:13,0:14:6.97:0,7,106	1/1:9,15:26:34.93:293,35,0	1/1:9,11:24:0.18:222,0,0	0/1:6,13:20:9.21:138,0,9	0/1:5,7:12:20.22:61,0,20	0/1:18,4:24:17.28:154,0,17	1/1:7,18:25:18.53:249,19,0	0/1:4,9:13:4.81:173,0,5	0/0:9,0:18:29.88:0,30,91	0/0:1,0:14:20.69:0,21,61	0/1:7,7:14:8.11:134,0,8	1/1:6,18:24:44.44:336,44,0	0/1:5,5:10:9.02:41,0,9	1/1:6,0:17:13.95:144,14,0	1/1:7,1:18:28.85:153,29,0	1/1:4,1:10:11.52:68,12,0	0/1:3,4:7:9.02:41,0,9	1/1:8,18:26:44.63:341,45,0	1/1:12,8:21:5.61:136,6,0	1/1:0,7:7:17.98:151,18,0
chr10	63102360	.	TTG	T	8190.75	PASS	AB=1.000;AC=43;AF=0.768;AN=56;BaseQRankSum=4.480;DP=446;FS=1.032;HRun=0;HaplotypeScore=125.4803;InbreedingCoeff=0.8962;MQ=51.91;MQ0=12;MQRankSum=-5.535;QD=23.81;ReadPosRankSum=1.080;VQSLOD=5.6611;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:20,6:24:45.09:537,45,0	0/0:7,0:7:17.86:0,18,244	0/1:17,0:5:9.16:9,0,93	0/0:27,0:10:20.96:0,21,391	1/1:18,3:21:34.97:323,35,0	1/1:18,1:19:53.94:519,54,0	1/1:18,2:20:47.60:555,48,0	0/0:22,0:22:63.13:0,63,846	0/0:15,0:15:36.11:0,36,509	1/1:11,3:14:39.09:442,39,0	1/1:16,5:21:47.01:454,47,0	1/1:6,2:8:18.01:177,18,0	1/1:18,4:22:54.12:636,54,0	1/1:8,1:9:17.95:236,18,0	1/1:19,0:19:53.76:577,54,0	1/1:6,1:7:18.01:165,18,0	0/0:24,0:23:45.06:0,45,496	0/0:7,0:7:18.03:0,18,206	1/1:13,0:13:30.07:347,30,0	1/1:19,1:20:51.05:508,51,0	1/1:16,3:18:36.11:481,36,0	1/1:10,2:12:29.42:337,29,0	1/1:10,0:10:30.05:345,30,0	1/1:11,2:11:24.06:292,24,0	1/1:19,0:19:33.01:297,33,0	1/1:12,2:14:36.06:418,36,0	1/1:15,2:17:39.05:413,39,0	1/1:4,0:4:12.02:122,12,0
chr10	63102363	.	TGTACACAC	T	17165.05	PASS	AB=0.910;AC=43;AF=0.768;AN=56;BaseQRankSum=-1.068;DP=440;FS=2.943;HRun=0;HaplotypeScore=131.0218;InbreedingCoeff=0.7139;MQ=54.11;MQ0=12;MQRankSum=-5.892;QD=50.34;ReadPosRankSum=0.127;VQSLOD=4.3950;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:16,9:23:45.15:950,45,0	0/1:8,0:8:7.77:8,0,208	0/1:21,0:5:9.15:9,0,93	0/0:30,0:12:20.08:0,20,600	1/1:11,10:21:41.99:942,42,0	1/1:4,14:19:54.18:1444,54,0	0/1:12,7:19:11.47:947,0,11	0/0:22,0:21:63.21:0,63,998	0/0:16,0:16:39.12:0,39,1100	1/1:6,7:13:39.13:876,39,0	1/1:9,11:21:40.25:1125,40,0	1/1:3,5:8:18.06:493,18,0	1/1:13,8:21:54.11:1134,54,0	1/1:6,1:7:18.06:300,18,0	1/1:7,11:18:54.18:1260,54,0	1/1:1,6:7:18.06:543,18,0	0/0:24,0:23:45.15:0,45,590	0/0:7,0:7:10.46:0,10,193	1/1:0,11:11:30.10:599,30,0	1/1:4,14:18:51.17:1382,51,0	1/1:18,0:18:36.12:523,36,0	1/1:9,3:12:30.09:525,30,0	1/1:5,5:10:30.10:651,30,0	1/1:9,3:10:24.08:481,24,0	1/1:1,16:18:33.11:970,33,0	1/1:8,4:12:36.09:670,36,0	1/1:7,9:16:42.14:971,42,0	1/1:1,3:4:12.04:363,12,0
chr10	63102365	.	TACAC	T	5240.91	PASS	AB=1.000;AC=49;AF=0.907;AN=54;BaseQRankSum=3.610;DP=436;FS=6.773;HRun=0;HaplotypeScore=146.2509;InbreedingCoeff=0.5129;MQ=53.87;MQ0=12;MQRankSum=-4.090;QD=14.20;ReadPosRankSum=-0.062;VQSLOD=3.5679;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:25:21.03:217,21,0	1/1:4,3:8:6.02:79,6,0	./.	0/0:31,0:12:6.02:0,6,86	1/1:22,0:21:32.78:254,33,0	1/1:19,0:19:44.96:402,45,0	0/1:19,0:19:37.76:167,0,38	1/1:12,9:20:27.09:439,27,0	0/0:8,0:15:21.05:0,21,360	1/1:12,0:12:21.02:194,21,0	1/1:21,0:21:38:288,38,0	1/1:8,0:8:15.01:138,15,0	1/1:21,0:21:25.80:226,26,0	1/1:6,0:6:3:28,3,0	1/1:18,0:18:32.98:295,33,0	1/1:7,0:7:18.02:167,18,0	1/1:4,20:23:39.13:634,39,0	1/1:5,1:7:8.15:124,8,0	1/1:11,0:11:12.01:112,12,0	1/1:18,0:18:42.02:379,42,0	1/1:18,0:17:3:28,3,0	1/1:11,0:11:8.96:72,9,0	1/1:10,0:10:14.98:128,15,0	1/1:12,0:10:9.01:84,9,0	1/1:18,0:18:33.03:303,33,0	1/1:11,0:11:12.01:112,12,0	1/1:16,0:16:27:242,27,0	1/1:4,0:4:12.02:130,12,0
chr10	63102406	.	A	AT	5145.64	PASS	AB=0.640;AC=40;AF=0.714;AN=56;BaseQRankSum=0.114;DP=560;FS=0.000;HRun=12;HaplotypeScore=119.9679;InbreedingCoeff=0.7759;MQ=56.33;MQ0=11;MQRankSum=-3.198;QD=13.30;ReadPosRankSum=3.757;VQSLOD=4.4239;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,0:32:54.83:317,55,0	0/0:4,0:4:5.78:0,6,34	0/0:51,2:12:7.18:0,7,78	0/0:33,0:12:11.45:0,11,65	1/1:1,0:22:54.28:278,54,0	1/1:8,19:27:28.52:388,29,0	1/1:5,14:19:29.97:276,30,0	0/0:25,0:25:65.46:0,65,463	0/0:21,0:21:44.12:0,44,292	1/1:5,15:20:38.88:339,39,0	1/1:6,16:22:24.48:352,24,0	1/1:10,11:21:20.94:228,21,0	1/1:5,15:21:37.29:311,37,0	1/1:0,9:9:6.01:58,6,0	1/1:7,20:27:11.39:218,11,0	0/1:8,10:18:8.38:188,0,8	0/0:27,0:27:55.80:0,56,393	0/0:7,0:7:14.84:0,15,103	1/1:11,2:13:32.31:260,32,0	1/1:7,15:24:19.90:392,20,0	1/1:1,4:6:8.85:72,9,0	0/1:3,4:7:1.57:89,0,2	1/1:5,7:12:20.98:190,21,0	1/1:4,6:10:8.93:75,9,0	1/1:15,7:22:45.12:357,45,0	1/1:3,13:18:41.33:338,41,0	1/1:3,21:25:32.89:304,33,0	1/1:0,10:10:12.02:116,12,0
chr10	63102872	.	G	GA	1489.88	PASS	AB=0.971;AC=10;AF=0.179;AN=56;BaseQRankSum=-7.561;DP=476;FS=7.148;HRun=9;HaplotypeScore=51.0255;InbreedingCoeff=0.7316;MQ=64.88;MQ0=5;MQRankSum=-1.126;QD=13.54;ReadPosRankSum=-1.479;VQSLOD=2.6668;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:95.96:0,96,833	1/1:1,8:9:14.97:151,15,0	0/0:22,0:14:26.66:0,27,207	0/1:15,0:11:5.91:6,0,106	0/0:20,0:21:31.71:0,32,424	0/0:22,1:23:26.80:0,27,462	0/0:16,0:16:32.98:0,33,286	1/1:3,19:22:51.14:560,51,0	0/0:5,0:5:15:0,15,130	0/0:18,0:18:38.98:0,39,339	0/0:20,0:20:41.95:0,42,364	0/0:14,0:14:5.90:0,6,279	0/0:13,0:13:20.98:0,21,182	0/0:8,0:8:20.97:0,21,178	0/1:15,1:16:0.19:0,0,227	0/0:14,0:14:38.99:0,39,339	1/1:3,20:23:42.11:462,42,0	1/1:6,18:25:2.08:460,2,0	0/0:19,0:19:25.63:0,26,363	0/0:21,0:21:49.99:0,50,417	0/0:15,0:15:32.98:0,33,286	0/0:8,0:8:18:0,18,156	0/0:8,0:8:17.99:0,18,154	0/0:12,0:12:35.03:0,35,292	0/0:16,0:16:38.98:0,39,338	0/0:26,0:25:59.97:0,60,520	0/0:26,0:26:62.83:0,63,542	0/0:4,0:4:12:0,12,104
chr10	63104393	.	C	CTTATTTATTTAT	2953.14	PASS	AB=1.000;AC=18;AF=0.321;AN=56;BaseQRankSum=6.731;DP=299;FS=5.306;HRun=0;HaplotypeScore=106.1447;InbreedingCoeff=-0.1831;MQ=65.58;MQ0=0;MQRankSum=-6.267;QD=18.46;ReadPosRankSum=1.523;VQSLOD=1.7603;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:5,6:14:6.02:331,6,0	0/0:5,0:5:12:0,12,215	0/0:12,0:11:27.01:0,27,339	0/0:10,0:8:24.02:0,24,350	1/1:7,1:8:15:277,15,0	0/1:10,0:10:99:348,0,200	0/1:8,0:8:60.10:60,0,213	0/0:22,0:22:66.20:0,66,1595	0/0:10,0:10:30.10:0,30,869	0/1:6,0:6:99:105,0,194	0/1:11,0:11:93.07:93,0,325	0/1:9,0:9:99:229,0,166	0/0:4,0:4:9.02:0,9,125	0/1:4,0:4:98.79:116,0,99	0/1:6,0:6:99:107,0,185	0/1:7,0:7:99:107,0,118	0/0:29,0:29:84.19:0,84,2604	0/0:8,0:8:18.05:0,18,538	0/1:20,0:20:99:123,0,594	0/0:10,0:10:30.06:0,30,383	0/1:13,0:13:91.87:92,0,307	0/0:11,0:11:27.04:0,27,560	0/0:7,0:7:21.07:0,21,421	0/0:11,0:11:21.05:0,21,331	0/1:11,0:11:99:351,0,204	0/1:10,0:10:99:346,0,257	0/1:14,0:14:85.78:86,0,463	0/1:9,0:9:99:353,0,220
chr10	63104395	.	C	CATTTATTTATTTATTT	10023.20	PASS	AC=34;AF=0.680;AN=50;BaseQRankSum=-1.015;DP=322;FS=0.000;HRun=0;HaplotypeScore=135.1037;InbreedingCoeff=0.7242;MQ=63.24;MQ0=0;MQRankSum=-6.986;QD=51.93;ReadPosRankSum=-2.427;VQSLOD=3.5460;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:13:12.04:470,12,0	0/0:4,0:4:3.01:0,3,132	./.	./.	1/1:10,0:10:6.02:238,6,0	1/1:11,3:14:21.07:1342,21,0	1/1:10,0:10:3.08:237,3,0	0/0:22,0:22:30.09:0,30,845	0/0:9,0:10:18.06:0,18,711	1/1:6,1:7:6.02:359,6,0	1/1:12,1:14:12:507,12,0	1/1:8,4:12:12.04:906,12,0	1/1:5,0:5:3.01:227,3,0	1/1:5,1:6:12.04:742,12,0	1/1:6,1:7:6.02:361,6,0	1/1:6,2:8:6.02:455,6,0	0/0:28,0:28:66.20:0,66,2542	0/0:7,0:7:15.04:0,15,553	1/1:20,0:20:14.26:602,14,0	./.	1/1:15,0:15:12.04:445,12,0	0/0:5,0:10:12.04:0,12,434	0/0:4,0:7:8.70:0,9,235	0/0:4,0:11:3.01:0,3,112	1/1:8,3:11:5.23:821,5,0	1/1:8,3:12:15.05:895,15,0	1/1:15,1:16:9.03:512,9,0	1/1:6,4:13:12.04:906,12,0
chr10	63105715	.	A	AC	2390.58	PASS	AB=0.861;AC=45;AF=0.804;AN=56;BaseQRankSum=-1.477;DP=389;FS=21.500;HRun=9;HaplotypeScore=58.0194;InbreedingCoeff=0.5687;MQ=78.58;MQ0=0;MQRankSum=-1.577;QD=7.69;ReadPosRankSum=1.789;VQSLOD=0.2997;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:14:10.16:49,10,0	0/0:8,0:8:17.99:0,18,156	0/0:17,0:15:27.38:0,27,205	0/1:18,0:18:8.03:8,0,97	1/1:10,0:16:14.41:90,14,0	0/1:6,7:13:10.53:27,0,11	1/1:6,14:20:15.04:166,15,0	0/0:36,0:36:38.90:0,39,325	1/1:9,0:9:11.36:57,11,0	1/1:4,8:12:20.09:205,20,0	1/1:3,8:11:9.02:100,9,0	1/1:3,9:12:8.86:99,9,0	1/1:4,6:10:6.02:66,6,0	1/1:5,5:10:6.02:66,6,0	1/1:5,17:22:21.06:232,21,0	1/1:4,13:17:24.06:265,24,0	0/0:16,0:16:32.96:0,33,281	0/1:13,1:14:3.18:3,0,204	1/1:7,0:10:11.65:74,12,0	1/1:5,9:14:14.87:134,15,0	1/1:8,0:14:14.54:105,15,0	1/1:2,4:6:6.02:66,6,0	1/1:7,5:12:21.06:232,21,0	1/1:3,8:11:9.02:100,9,0	1/1:4,6:10:3.01:33,3,0	1/1:4,7:11:21:218,21,0	1/1:13,1:20:8.76:67,9,0	1/1:1,4:5:9.02:99,9,0
chr10	63105786	.	GC	G	1658.35	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=7.174;DP=451;FS=4.787;HRun=8;HaplotypeScore=46.7904;InbreedingCoeff=0.9604;MQ=69.66;MQ0=0;MQRankSum=0.679;QD=23.36;ReadPosRankSum=-2.288;VQSLOD=3.1543;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:69.21:0,69,831	1/1:0,10:10:27.04:261,27,0	0/0:6,0:6:9.03:0,9,107	0/0:7,0:7:8.96:0,9,90	0/0:20,0:20:57.11:0,57,666	0/0:21,0:21:63.18:0,63,748	0/0:11,0:11:33.10:0,33,399	1/1:6,26:32:78.10:747,78,0	0/0:0,0:11:28.75:0,29,146	0/0:25,0:26:75.09:0,75,876	0/0:9,0:9:24.06:0,24,274	0/0:16,0:16:42.59:0,43,497	0/0:16,0:16:42.13:0,42,507	0/0:11,0:12:35.98:0,36,413	0/0:20,0:20:45.14:0,45,544	0/0:15,0:16:38.98:0,39,440	1/1:1,15:16:45.07:434,45,0	1/1:0,13:13:39.06:377,39,0	0/0:18,0:18:45.10:0,45,527	0/0:22,0:22:66.20:0,66,795	0/0:5,0:5:15.05:0,15,181	0/0:11,0:11:33.10:0,33,397	0/0:22,0:22:54.15:0,54,640	0/0:7,0:7:18.06:0,18,217	0/0:23,0:23:69.21:0,69,833	0/0:20,0:20:57.17:0,57,680	0/0:23,0:23:57.12:0,57,687	0/0:12,0:12:33.10:0,33,397
chr10	63108044	.	G	GT	416.28	PASS	AB=0.813;AC=5;AF=0.089;AN=56;BaseQRankSum=-0.084;DP=492;FS=5.907;HRun=12;HaplotypeScore=54.9832;InbreedingCoeff=0.4480;MQ=75.35;MQ0=1;MQRankSum=0.546;QD=6.71;ReadPosRankSum=-0.750;VQSLOD=1.5700;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:34:57.43:0,57,582	0/0:7,0:7:20.88:0,21,153	0/0:18,0:14:5.43:0,5,36	0/1:11,0:9:0.16:21,0,0	0/0:22,1:23:22.81:0,23,301	0/0:19,1:20:21.44:0,21,316	0/0:21,0:21:49.74:0,50,356	0/1:22,3:25:22.91:23,0,291	0/1:2,10:12:13.72:203,0,14	0/0:33,0:33:77.46:0,77,565	0/0:22,0:22:50.64:0,51,372	0/0:16,0:16:13.16:0,13,146	1/1:1,12:13:30.05:292,30,0	0/0:14,0:14:32.80:0,33,240	0/0:12,0:12:29.83:0,30,219	0/0:10,0:12:30.90:0,31,207	0/0:28,0:28:53.14:0,53,504	0/0:8,0:8:20.87:0,21,153	0/0:15,0:15:32.76:0,33,241	0/0:15,1:16:6.28:0,6,200	0/0:17,0:17:40.53:0,41,289	0/0:14,0:14:35.77:0,36,261	0/0:16,0:16:47.62:0,48,343	0/0:14,0:13:32.75:0,33,241	0/0:20,0:20:23.28:0,23,285	0/0:21,0:21:47.69:0,48,350	0/0:16,0:16:47.73:0,48,350	0/0:11,0:12:19.91:0,20,137
chr10	63110872	.	G	GT	14503.49	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=-17.889;DP=726;FS=0.286;HRun=5;HaplotypeScore=62.0427;InbreedingCoeff=0.9988;MQ=88.47;MQ0=0;MQRankSum=-4.215;QD=33.50;ReadPosRankSum=5.591;VQSLOD=4.8284;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:84.21:0,84,902	0/0:7,0:7:18.04:0,18,193	0/0:23,0:23:63.08:0,63,657	0/0:30,0:30:90.17:0,90,935	0/0:34,0:34:96.20:0,96,1008	1/1:2,23:25:60.20:789,60,0	1/1:0,23:23:63.20:829,63,0	0/0:42,0:42:99:0,117,1234	0/0:20,0:20:54.12:0,54,573	1/1:1,32:33:96.26:1215,96,0	1/1:1,29:30:78.17:1004,78,0	1/1:2,30:32:78.25:1026,78,0	1/1:0,29:29:69.22:908,69,0	1/1:1,25:26:66.21:868,66,0	1/1:2,24:26:63.16:809,63,0	1/1:4,28:32:81.26:1066,81,0	0/0:30,0:30:81.19:0,81,862	0/0:17,0:17:40.91:0,41,424	1/1:1,15:16:45.14:575,45,0	1/1:3,29:32:87.27:1123,87,0	1/1:4,22:26:54.15:691,54,0	0/0:19,0:19:57.10:0,57,594	0/0:21,0:21:63.16:0,63,677	0/0:21,0:21:57.12:0,57,603	1/1:0,23:23:54.18:711,54,0	1/1:2,33:35:99:1271,99,0	1/1:2,30:32:87.28:1144,87,0	1/1:0,12:12:36.12:474,36,0
chr10	63115205	.	AGG	A	12524.34	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=-9.199;DP=641;FS=1.494;HRun=10;HaplotypeScore=88.1884;InbreedingCoeff=0.9843;MQ=74.78;MQ0=5;MQRankSum=-2.644;QD=25.56;ReadPosRankSum=3.159;VQSLOD=4.9885;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,36:37:90.23:1003,90,0	0/0:4,0:7:9.03:0,9,116	0/0:23,0:20:37.74:0,38,469	0/0:16,0:16:17.21:0,17,192	1/1:5,7:12:18.03:201,18,0	1/1:2,18:20:48.10:535,48,0	1/1:8,33:41:90.21:1003,90,0	0/0:15,0:21:29.98:0,30,307	0/0:8,0:21:27.05:0,27,294	1/1:2,9:12:20.87:292,21,0	1/1:3,13:16:36.09:401,36,0	1/1:5,29:34:87.16:954,87,0	1/1:2,21:22:51.03:568,51,0	1/1:2,26:27:63.16:702,63,0	1/1:4,15:19:39.09:435,39,0	1/1:3,13:16:36.09:401,36,0	0/0:6,0:26:62.70:0,63,589	0/0:15,0:35:54.11:0,54,591	1/1:4,13:17:39.05:416,39,0	1/1:1,15:16:42.11:468,42,0	1/1:5,53:58:99:1538,138,0	1/1:2,16:18:39.10:433,39,0	1/1:4,9:13:27.06:294,27,0	1/1:5,23:27:57.13:634,57,0	1/1:1,24:25:69.18:769,69,0	1/1:4,23:27:71.40:774,71,0	1/1:7,13:20:39.08:435,39,0	1/1:0,9:9:24.06:268,24,0
chr10	63118237	.	CT	C	4662.15	PASS	AB=0.958;AC=33;AF=0.589;AN=56;BaseQRankSum=1.720;DP=392;FS=3.718;HRun=2;HaplotypeScore=134.4322;InbreedingCoeff=0.9046;MQ=77.90;MQ0=1;MQRankSum=-6.831;QD=18.88;ReadPosRankSum=4.296;VQSLOD=5.2107;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:35.31:0,35,300	0/0:3,0:3:9.01:0,9,85	0/0:21,0:17:28.65:0,29,394	0/1:22,0:21:15.93:16,0,270	0/0:14,0:14:26.28:0,26,187	1/1:7,16:24:63.74:535,64,0	1/1:1,11:12:26.93:243,27,0	0/0:15,0:15:38.90:0,39,339	0/0:16,0:16:40.62:0,41,218	1/1:0,15:16:44.76:371,45,0	1/1:4,3:7:20.72:161,21,0	1/1:0,23:24:46.09:363,46,0	1/1:4,10:16:42.85:332,43,0	1/1:3,13:17:47.76:373,48,0	1/1:7,9:17:50.79:415,51,0	1/1:6,6:14:28.12:318,28,0	0/0:15,0:15:39.03:0,39,385	0/0:11,0:11:21.05:0,21,230	1/1:1,7:10:26.74:238,27,0	1/1:3,5:8:15.05:151,15,0	1/1:0,13:12:8.97:83,9,0	0/0:14,0:14:34.03:0,34,186	0/0:11,0:11:28.58:0,29,163	0/0:12,0:12:23.03:0,23,138	1/1:7,6:13:35.94:304,36,0	1/1:1,12:13:35.88:300,36,0	1/1:1,11:14:36.01:338,36,0	1/1:4,2:6:14.97:122,15,0
chr10	63118239	.	TCCCCCC	T	4348.68	PASS	AB=0.996;AC=28;AF=0.500;AN=56;BaseQRankSum=11.646;DP=388;FS=15.154;HRun=10;HaplotypeScore=169.5392;InbreedingCoeff=-0.1153;MQ=81.05;MQ0=1;MQRankSum=-11.111;QD=14.74;ReadPosRankSum=10.310;VQSLOD=-0.0862;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:12,0:12:10.81:11,0,204	0/0:4,0:4:6.02:0,6,154	0/0:23,0:19:43.84:0,44,1008	0/0:26,0:24:40.04:0,40,672	0/1:14,0:14:57.91:58,0,63	0/1:23,0:23:8.36:280,0,8	0/1:11,0:11:20.56:97,0,21	0/0:15,0:15:13.65:0,14,340	1/1:5,11:16:39.04:598,39,0	0/1:16,0:16:2.97:188,0,3	0/1:7,0:7:35.56:36,0,45	1/1:24,0:24:26.45:297,26,0	0/1:16,0:16:10.60:201,0,11	0/1:17,0:17:68.20:220,0,68	0/1:16,0:16:39.95:198,0,40	0/1:13,1:14:52.01:188,0,52	0/0:13,0:14:33.11:0,33,829	0/0:10,0:10:18.06:0,18,465	0/1:9,0:9:30.33:102,0,30	0/1:7,0:7:34.13:65,0,34	0/1:13,0:12:13.42:13,0,24	1/1:3,10:13:36.12:622,36,0	1/1:2,9:11:30:452,30,0	1/1:5,6:11:20.58:292,21,0	0/1:15,0:15:56.79:94,0,57	0/1:12,0:12:44.52:111,0,45	1/1:13,0:13:18.09:200,18,0	0/1:5,0:5:26.93:27,0,36
chr10	63118243	.	C	CG	929.38	PASS	AB=0.750;AC=9;AF=0.161;AN=56;BaseQRankSum=-8.482;DP=370;FS=6.701;HRun=0;HaplotypeScore=146.9875;InbreedingCoeff=0.8406;MQ=77.81;MQ0=2;MQRankSum=5.377;QD=17.21;ReadPosRankSum=-2.362;VQSLOD=4.9588;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:22.72:0,23,188	1/1:0,4:4:6.02:83,6,0	0/0:25,0:19:34.49:0,34,380	0/0:23,0:21:29.55:0,30,333	0/0:14,0:14:20.91:0,21,168	0/0:20,0:20:56.77:0,57,482	0/0:11,0:11:26.72:0,27,222	1/1:2,15:17:30.78:319,31,0	0/0:13,0:14:13.72:0,14,81	0/0:15,0:15:41.88:0,42,349	0/0:7,0:7:13.20:0,13,89	0/0:22,0:22:46.73:0,47,366	0/0:16,0:16:42.31:0,42,346	0/0:17,0:17:50.92:0,51,434	0/0:16,0:16:47.84:0,48,400	0/0:13,0:13:38.42:0,38,315	1/1:2,11:13:32.71:429,33,0	1/1:0,11:11:18.06:248,18,0	0/0:9,0:9:26.63:0,27,192	0/0:7,0:7:18.83:0,19,142	0/0:10,0:9:8.97:0,9,75	0/0:13,0:14:15.88:0,16,84	0/0:10,0:10:19.96:0,20,70	0/1:6,0:9:2.31:2,0,29	0/0:13,0:13:24.71:0,25,212	0/0:12,0:12:35.65:0,36,282	0/0:13,0:13:35.01:0,35,261	0/0:4,0:4:11.99:0,12,102
chr10	63118244	.	CCCCCCACCCCA	C	15200.89	PASS	AB=0.967;AC=42;AF=0.750;AN=56;BaseQRankSum=4.876;DP=365;FS=1.150;HRun=0;HaplotypeScore=160.2394;InbreedingCoeff=0.7597;MQ=76.82;MQ0=2;MQRankSum=-8.931;QD=55.28;ReadPosRankSum=6.659;VQSLOD=4.1569;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:11,0:11:37.31:87,0,37	0/0:4,0:4:6.02:0,6,304	0/0:25,0:19:42.14:0,42,1361	0/0:22,0:20:18.46:0,18,749	0/1:13,1:14:4.72:227,0,5	1/1:19,1:20:51:1596,51,0	1/1:11,0:11:23.83:639,24,0	0/0:15,0:15:27.09:0,27,1172	1/1:14,0:14:35.05:580,35,0	1/1:15,0:15:36.04:1099,36,0	1/1:8,0:8:11.96:266,12,0	1/1:22,0:22:45.15:1457,45,0	1/1:14,2:16:35.04:1097,35,0	1/1:17,0:17:16.93:1253,17,0	1/1:15,1:16:38.70:1166,39,0	1/1:11,1:12:29.57:832,30,0	0/0:13,0:13:32.45:0,32,1577	0/0:11,0:11:21.07:0,21,989	1/1:7,2:9:20.67:487,21,0	1/1:7,0:7:15.05:442,15,0	1/1:9,0:8:5.84:112,6,0	1/1:13,0:13:36.12:607,36,0	1/1:10,0:10:26.96:416,27,0	1/1:9,0:9:19.98:282,20,0	1/1:13,0:13:20.86:625,21,0	1/1:12,0:12:23.97:708,24,0	1/1:12,1:13:36.08:1028,36,0	1/1:4,0:4:5.87:196,6,0
chr10	63118245	.	CCCCCACCCCA	C	13227.45	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=5.906;DP=370;FS=6.631;HRun=0;HaplotypeScore=163.6080;InbreedingCoeff=0.8771;MQ=77.51;MQ0=2;MQRankSum=-8.095;QD=47.41;ReadPosRankSum=6.169;VQSLOD=3.5181;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,1:9:5.81:146,6,0	0/0:4,0:4:6.02:0,6,277	0/0:26,0:20:41.83:0,42,1246	0/0:21,0:20:13.47:0,13,690	1/1:14,1:15:12.04:273,12,0	1/1:6,14:20:51.15:1282,51,0	1/1:5,6:11:21.05:496,21,0	0/0:15,0:15:27.09:0,27,1074	1/1:15,0:15:39.10:754,39,0	1/1:5,10:15:33.11:869,33,0	1/1:5,3:8:12:205,12,0	1/1:8,13:21:45.15:1168,45,0	1/1:8,8:16:32.51:847,33,0	1/1:6,11:17:39.13:1018,39,0	1/1:8,8:16:36.12:931,36,0	1/1:7,5:12:27.09:686,27,0	0/0:13,0:13:32.85:0,33,1430	0/0:11,0:11:21.07:0,21,898	1/1:8,1:9:15.05:387,15,0	1/1:2,5:7:15.05:345,15,0	1/1:8,1:8:3.01:79,3,0	1/1:14,0:14:36.12:745,36,0	1/1:10,0:10:27.09:525,27,0	1/1:12,0:12:23.50:383,24,0	1/1:8,5:13:21.04:494,21,0	1/1:5,7:12:21.07:552,21,0	1/1:7,7:14:36.10:885,36,0	1/1:2,2:4:6.02:159,6,0
chr10	63118246	.	CCCCACCCCA	C	13229.63	PASS	AB=1.000;AC=43;AF=0.768;AN=56;BaseQRankSum=6.218;DP=363;FS=8.477;HRun=0;HaplotypeScore=155.2817;InbreedingCoeff=0.8674;MQ=76.70;MQ0=2;MQRankSum=-8.938;QD=48.64;ReadPosRankSum=6.694;VQSLOD=3.7791;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,1:9:12.01:202,12,0	0/0:4,0:4:6.02:0,6,251	0/0:27,0:21:44.84:0,45,1231	0/0:19,0:18:28.81:0,29,681	1/1:6,9:15:12.04:307,12,0	1/1:18,1:19:51.07:1142,51,0	1/1:10,0:10:15.73:430,16,0	0/0:16,0:16:30.09:0,30,1047	1/1:13,2:15:42.07:1083,42,0	1/1:14,1:15:32.61:775,33,0	1/1:7,0:7:11.99:180,12,0	1/1:19,1:20:45.15:1044,45,0	1/1:15,1:16:31.31:759,31,0	1/1:16,1:17:39.13:910,39,0	1/1:15,1:16:30.49:833,30,0	1/1:10,2:12:21.41:642,21,0	0/0:13,0:13:32.74:0,33,1273	0/0:11,0:11:21.07:0,21,805	1/1:7,2:9:13.50:351,14,0	1/1:6,0:6:15.02:302,15,0	0/1:8,0:7:1.73:65,0,2	1/1:13,1:14:36.12:1031,36,0	1/1:9,0:9:27.09:740,27,0	1/1:12,0:12:23.93:558,24,0	1/1:13,0:13:21.06:448,21,0	1/1:12,0:12:21.54:493,22,0	1/1:12,2:14:37.30:794,37,0	1/1:4,0:4:6.02:141,6,0
chr10	63118249	.	CACCCCACCCCA	C	12495.95	PASS	AB=1.000;AC=42;AF=0.750;AN=56;BaseQRankSum=7.349;DP=341;FS=4.080;HRun=0;HaplotypeScore=165.4289;InbreedingCoeff=0.7991;MQ=71.62;MQ0=2;MQRankSum=-9.043;QD=49.00;ReadPosRankSum=7.020;VQSLOD=4.3232;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,0:10:12.48:138,12,0	0/0:4,0:4:6.02:0,6,317	0/0:24,0:18:45.14:0,45,1500	0/0:17,0:16:15.40:0,15,740	0/1:11,0:11:2.91:194,0,3	1/1:18,0:18:50.91:1296,51,0	1/1:11,0:11:13.96:496,14,0	0/0:17,0:17:36.12:0,36,1523	1/1:16,0:16:36.83:469,37,0	1/1:14,0:14:32.24:888,32,0	1/1:4,0:9:10.28:198,10,0	1/1:18,0:18:45.15:1213,45,0	1/1:14,1:15:31.41:904,31,0	1/1:16,1:17:40.38:1097,40,0	1/1:10,2:12:36.12:1026,36,0	1/1:9,0:9:27.09:666,27,0	0/0:12,0:12:32.85:0,33,1566	0/0:11,0:11:24.08:0,24,1093	1/1:8,0:8:13.51:366,14,0	1/1:5,0:5:15.05:357,15,0	0/1:6,0:5:1.97:82,0,2	1/1:17,0:17:34.71:465,35,0	1/1:10,0:10:26.10:311,26,0	1/1:13,0:13:5.59:183,6,0	1/1:6,4:10:21.06:536,21,0	1/1:9,0:9:21.07:566,21,0	1/1:13,0:13:36.90:871,37,0	1/1:4,0:4:11.01:176,11,0
chr10	63118252	.	CCCA	C	4984.77	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=7.968;DP=339;FS=1.123;HRun=0;HaplotypeScore=140.2296;InbreedingCoeff=0.9190;MQ=71.60;MQ0=2;MQRankSum=-9.014;QD=19.86;ReadPosRankSum=6.230;VQSLOD=4.2460;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,0:7:14.96:120,15,0	0/0:4,0:4:6.02:0,6,134	0/0:23,0:17:41.31:0,41,649	0/0:18,0:16:11.61:0,12,443	1/1:11,0:11:11.95:91,12,0	1/1:18,0:18:47.78:361,48,0	1/1:9,0:9:17.21:150,17,0	0/0:18,0:18:42.14:0,42,825	1/1:2,13:15:39.11:481,39,0	1/1:14,0:14:34.09:251,34,0	1/1:9,0:9:8.85:58,9,0	1/1:21,0:21:43.18:319,43,0	1/1:12,0:12:32.85:247,33,0	1/1:16,0:16:42.30:321,42,0	1/1:14,0:14:35.84:269,36,0	1/1:8,1:9:26.91:218,27,0	0/0:14,0:14:38.65:0,39,744	0/0:11,0:11:24.08:0,24,483	1/1:6,0:6:14.92:111,15,0	1/1:6,0:6:14.90:110,15,0	1/1:9,0:8:8.63:72,9,0	1/1:2,16:18:39.11:508,39,0	1/1:1,9:10:30.05:375,30,0	1/1:0,11:11:20.96:292,21,0	1/1:11,0:11:17.90:135,18,0	1/1:9,0:9:20.51:157,21,0	1/1:12,0:12:32.80:245,33,0	1/1:4,0:4:11.95:92,12,0
chr10	63123510	.	TA	T	5742.77	PASS	AB=1.000;AC=41;AF=0.732;AN=56;BaseQRankSum=12.698;DP=447;FS=59.291;HRun=12;HaplotypeScore=87.9365;InbreedingCoeff=0.8467;MQ=67.36;MQ0=0;MQRankSum=1.915;QD=18.77;ReadPosRankSum=-1.142;VQSLOD=0.8979;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:63.08:0,63,619	0/0:7,0:7:18.04:0,18,182	0/1:8,0:6:14.34:14,0,33	0/0:12,0:8:2.77:0,3,19	0/0:29,0:29:66.13:0,66,670	1/1:2,21:23:33.25:374,33,0	1/1:0,6:6:17.93:139,18,0	0/0:28,0:28:64.93:0,65,624	1/1:0,6:6:17.93:139,18,0	1/1:3,16:19:47.80:371,48,0	1/1:3,14:17:41.84:325,42,0	1/1:2,9:11:23.90:186,24,0	1/1:1,9:10:28.93:215,29,0	1/1:0,9:10:23.90:186,24,0	1/1:2,13:15:38.85:302,39,0	1/1:2,10:12:29.88:232,30,0	0/0:23,0:23:63.11:0,63,632	0/0:13,0:13:30.06:0,30,305	1/1:12,14:26:47.73:365,48,0	1/1:2,18:20:53.78:418,54,0	1/1:0,6:6:17.93:139,18,0	1/1:0,6:6:17.93:139,18,0	1/1:3,10:13:10.31:207,10,0	1/1:1,3:4:5.98:46,6,0	1/1:2,28:31:82.72:632,83,0	1/1:2,18:20:50.77:392,51,0	1/1:0,17:17:47.82:371,48,0	1/1:3,23:26:71.61:549,72,0
chr10	63124056	.	CCA	C	2770.01	PASS	AB=0.868;AC=26;AF=0.464;AN=56;BaseQRankSum=14.033;DP=901;FS=5.043;HRun=0;HaplotypeScore=148.8323;InbreedingCoeff=0.3807;MQ=57.30;MQ0=34;MQRankSum=0.328;QD=5.32;ReadPosRankSum=2.516;VQSLOD=2.8358;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:45:45.24:298,45,0	1/1:2,0:10:9.72:41,10,0	0/0:50,0:16:3.01:0,3,38	0/0:50,0:25:4.25:0,4,45	1/1:6,0:21:27.80:139,28,0	0/0:22,1:23:16.03:0,16,708	0/1:28,3:31:19.18:19,0,654	1/1:17,0:25:20.02:92,20,0	1/1:9,0:35:36.93:182,37,0	0/1:37,7:43:36.23:36,0,957	0/0:19,1:20:15.99:0,16,695	0/1:17,3:20:22.14:22,0,612	0/0:33,2:33:15.70:0,16,982	0/0:33,0:33:10.95:0,11,1088	0/0:31,2:35:35.25:0,35,1218	0/0:39,0:39:58.95:0,59,1315	0/1:13,0:23:11.45:21,0,11	1/1:13,0:19:8.70:38,9,0	0/0:17,0:12:25.33:0,25,375	0/1:29,2:31:34.08:34,0,713	0/1:52,9:61:71.67:72,0,1253	1/1:9,18:28:44.83:506,45,0	1/1:9,19:28:9.82:564,10,0	1/1:20,34:52:57.26:890,57,0	0/0:31,1:33:37.09:0,37,1020	0/0:40,3:44:30.93:0,31,1291	0/1:23,2:25:7.10:7,0,819	0/1:11,2:15:6.17:6,0,394
chr10	63124638	.	T	TC	14222.61	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-8.547;DP=604;FS=7.930;HRun=3;HaplotypeScore=65.7924;InbreedingCoeff=0.9964;MQ=85.11;MQ0=0;MQRankSum=-2.465;QD=34.35;ReadPosRankSum=1.441;VQSLOD=5.3117;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:93.13:0,93,1076	0/0:7,0:7:20.93:0,21,231	0/0:19,0:19:44.95:0,45,502	0/0:22,0:21:51.01:0,51,555	0/0:12,0:12:30.09:0,30,359	1/1:0,30:30:75.25:1049,75,0	1/1:1,24:25:60.20:840,60,0	0/0:14,0:14:38.90:0,39,436	0/0:21,0:21:54.16:0,54,648	1/1:1,15:16:38.85:527,39,0	1/1:1,7:8:18.06:252,18,0	1/1:1,37:38:90.30:1258,90,0	1/1:2,25:27:63.68:881,64,0	1/1:0,20:20:48.16:670,48,0	1/1:2,19:21:45.10:630,45,0	1/1:1,12:13:33.08:462,33,0	0/0:29,0:29:87.24:0,87,1029	0/0:34,0:34:99:0,99,1162	1/1:4,15:18:44.90:576,45,0	1/1:1,16:17:38.92:516,39,0	1/1:2,46:48:99:1763,126,0	1/1:2,11:13:27.09:377,27,0	1/1:0,12:12:30.10:420,30,0	1/1:0,33:33:87.29:1218,87,0	1/1:0,15:15:42.14:588,42,0	1/1:0,28:28:84.21:1149,84,0	1/1:1,23:24:57.19:797,57,0	1/1:0,7:7:18.06:252,18,0
chr10	63125442	.	GTTT	G	4764.24	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=7.681;DP=596;FS=0.402;HRun=16;HaplotypeScore=121.2878;InbreedingCoeff=0.9455;MQ=69.16;MQ0=1;MQRankSum=-4.843;QD=15.27;ReadPosRankSum=3.047;VQSLOD=3.5150;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:24:54.75:0,55,489	0/0:11,0:11:24.06:0,24,373	0/0:29,0:15:14.91:0,15,145	0/0:13,0:7:8.13:0,8,62	0/0:15,0:28:52.10:0,52,509	1/1:5,14:20:38.87:405,39,0	1/1:3,18:21:26.90:290,27,0	0/0:25,0:32:69.10:0,69,990	0/0:11,0:20:26.77:0,27,405	1/1:10,21:31:58.50:623,58,0	1/1:1,16:19:41.95:476,42,0	1/1:11,11:23:21.99:238,22,0	1/1:5,12:18:19.27:210,19,0	1/1:8,9:17:17.76:191,18,0	1/1:7,7:17:29.39:271,29,0	1/1:7,11:18:20.74:226,21,0	0/0:27,0:28:60.16:0,60,948	0/0:15,0:20:39.13:0,39,637	1/1:10,6:19:14.34:209,14,0	1/1:8,8:19:15.71:156,16,0	1/1:5,9:17:1.10:228,1,0	0/0:23,0:27:66.14:0,66,956	0/0:23,0:24:55.39:0,55,850	0/0:19,0:27:51.11:0,51,781	1/1:6,12:19:32.77:355,33,0	1/1:5,10:15:26.85:290,27,0	1/1:7,16:24:41.70:435,42,0	1/1:9,6:15:14.73:161,15,0
chr10	63125456	.	TTTG	T	1054.09	PASS	AB=0.975;AC=17;AF=0.304;AN=56;BaseQRankSum=13.448;DP=551;FS=1.670;HRun=0;HaplotypeScore=118.9905;InbreedingCoeff=-0.2799;MQ=60.89;MQ0=2;MQRankSum=-2.705;QD=3.67;ReadPosRankSum=7.983;VQSLOD=1.3488;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:68.09:0,68,729	0/0:8,0:8:21.03:0,21,296	0/0:25,0:9:20.89:0,21,158	0/0:12,0:7:11.18:0,11,107	0/0:29,0:29:83.73:0,84,924	1/1:17,0:17:7.35:98,7,0	0/1:21,0:21:39.92:112,0,40	0/0:31,0:31:82.07:0,82,1184	0/0:20,0:20:35.95:0,36,468	0/1:30,0:30:99:130,0,135	0/1:21,0:21:49.72:160,0,50	0/1:17,2:19:76.11:76,0,105	0/1:17,2:19:71.51:79,0,72	0/1:11,1:12:10.74:85,0,11	0/1:15,1:16:60.58:61,0,93	0/1:16,0:16:63.56:64,0,69	0/0:22,0:22:65.77:0,66,879	0/0:21,0:20:48.02:0,48,681	0/1:14,0:14:43.08:43,0,75	0/1:16,1:17:22.57:23,0,118	0/1:17,0:17:54.87:55,0,95	0/0:23,0:23:64.81:0,65,849	0/0:24,0:24:68.79:0,69,895	0/0:23,0:23:51.12:0,51,785	0/1:20,0:20:66.15:66,0,112	0/1:15,0:15:33.47:33,0,98	0/1:21,0:22:30.06:111,0,30	0/1:11,0:11:23.34:23,0,76
chr10	63126076	.	CT	C	10537.21	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=15.168;DP=741;FS=0.000;HRun=10;HaplotypeScore=120.2107;InbreedingCoeff=0.9880;MQ=74.84;MQ0=0;MQRankSum=-1.682;QD=21.16;ReadPosRankSum=3.617;VQSLOD=4.0013;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,3:45:38.30:0,38,1039	0/0:8,0:8:18.05:0,18,199	0/0:24,0:22:9.93:0,10,233	0/0:19,0:18:17.48:0,17,204	0/0:26,0:26:66.18:0,66,730	1/1:2,31:34:86.01:735,86,0	1/1:4,21:25:53.98:469,54,0	0/0:28,0:28:60.16:0,60,663	0/0:27,0:28:68.22:0,68,772	1/1:6,26:32:80.96:702,81,0	1/1:4,19:23:53.98:469,54,0	1/1:3,28:31:59.65:679,60,0	1/1:3,26:29:68.98:599,69,0	1/1:1,15:16:32.99:287,33,0	1/1:2,33:35:92.98:807,93,0	1/1:3,20:23:53.99:469,54,0	0/0:38,0:38:96.24:0,96,1051	0/0:24,2:27:19.97:0,20,641	1/1:3,20:23:59.46:498,59,0	1/1:1,19:20:56.99:495,57,0	1/1:4,22:26:53.99:469,54,0	1/1:4,24:28:62.96:546,63,0	1/1:1,28:30:83.02:709,83,0	1/1:2,21:23:56.99:495,57,0	1/1:3,21:24:56.99:495,57,0	1/1:6,36:43:99:932,110,0	1/1:1,22:23:59.98:521,60,0	1/1:4,6:10:20.01:162,20,0
chr10	63127240	.	ATGT	A	15052.01	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=17.027;DP=701;FS=6.911;HRun=0;HaplotypeScore=120.8056;InbreedingCoeff=0.9977;MQ=55.85;MQ0=9;MQRankSum=-8.025;QD=44.80;ReadPosRankSum=0.688;VQSLOD=6.7526;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,132,2923	0/0:19,0:19:57.20:0,57,1292	0/0:38,0:20:57.19:0,57,1271	0/0:22,0:19:48.75:0,49,1012	0/0:27,0:27:78.27:0,78,1762	1/1:7,11:18:45.15:739,45,0	1/1:3,20:23:63.22:1048,63,0	0/0:27,0:27:78.27:0,78,1755	0/0:34,0:34:96.33:0,96,2151	1/1:3,23:26:72.25:1199,72,0	1/1:0,14:14:42.14:698,42,0	1/1:4,14:18:45.15:749,45,0	1/1:2,20:22:63.20:1023,63,0	1/1:1,28:29:87.30:1449,87,0	1/1:4,29:33:96.30:1547,96,0	1/1:1,25:26:75.26:1249,75,0	0/0:41,0:41:99:0,120,2661	0/0:37,0:37:99:0,108,2377	1/1:4,12:14:33.11:549,33,0	1/1:2,16:18:51.17:848,51,0	1/1:4,25:29:60.20:988,60,0	0/0:20,0:20:57.18:0,57,1232	0/0:30,0:30:87.30:0,87,1969	0/0:22,0:21:66.23:0,66,1491	1/1:3,13:16:39.13:649,39,0	1/1:1,22:23:69.23:1125,69,0	1/1:2,17:19:57.19:944,57,0	1/1:0,6:6:15.05:250,15,0
chr10	63127294	.	ACT	A	12353.14	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=16.624;DP=681;FS=5.298;HRun=0;HaplotypeScore=112.4076;InbreedingCoeff=0.9854;MQ=69.73;MQ0=0;MQRankSum=-5.037;QD=37.66;ReadPosRankSum=3.631;VQSLOD=6.7106;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,163,2946	0/0:12,0:12:36.12:0,36,667	0/0:34,0:34:98.69:0,99,1713	0/0:34,0:33:87.26:0,87,1513	0/0:30,0:30:84.29:0,84,1558	1/1:1,18:19:45.15:656,45,0	1/1:3,25:28:75.25:1083,75,0	0/0:35,0:35:99:0,102,1898	0/0:26,0:26:78.27:0,78,1461	1/1:3,18:21:51.17:751,51,0	1/1:0,15:15:45.11:638,45,0	1/1:2,26:28:75.25:1095,75,0	1/1:2,17:19:54.18:778,54,0	1/1:4,30:34:93.28:1324,93,0	1/1:3,27:30:78.23:1113,78,0	1/1:0,22:22:63.21:922,63,0	0/0:30,0:30:81.28:0,81,1506	0/0:31,0:31:87.28:0,87,1594	1/1:1,18:19:51.17:748,51,0	1/1:1,14:15:36.08:506,36,0	1/1:3,19:22:51.04:678,51,0	0/0:17,0:17:51.17:0,51,954	0/0:22,0:22:60.21:0,60,1115	0/0:27,0:26:81.28:0,81,1517	1/1:2,14:16:33.11:486,33,0	1/1:2,18:20:51.17:751,51,0	1/1:1,17:18:51.17:736,51,0	1/1:0,2:2:6.02:88,6,0
chr10	63129704	.	GACACACACACACACACACAC	G	224.64	PASS	AC=4;AF=0.074;AN=54;BaseQRankSum=2.020;DP=611;FS=0.000;HRun=0;HaplotypeScore=254.1463;InbreedingCoeff=0.4880;MQ=61.05;MQ0=16;MQRankSum=-2.140;QD=5.11;ReadPosRankSum=1.913;VQSLOD=2.2820;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:43:42.62:0,43,2734	0/0:5,0:5:9.03:0,9,627	0/0:32,0:18:3.01:0,3,70	0/0:28,0:14:1.25:0,1,3	0/0:14,0:14:9.03:0,9,749	0/0:21,0:19:18.06:0,18,1242	0/0:30,0:30:30.10:0,30,2139	0/0:15,0:15:24.08:0,24,1169	0/0:23,0:23:24.08:0,24,1880	0/0:22,0:22:48.16:0,48,3057	0/0:15,0:14:15.04:0,15,1021	0/0:19,0:18:30.88:0,31,1854	0/0:16,0:16:21.07:0,21,1520	0/0:20,0:20:24.08:0,24,1962	0/0:19,0:19:24.07:0,24,1750	0/0:9,0:18:8.62:0,9,607	0/0:11,0:21:18.04:0,18,964	0/0:23,0:38:51.92:0,52,2480	0/0:7,0:7:6.02:0,6,331	0/0:15,0:14:6.13:0,6,327	0/0:63,0:63:84.25:0,84,6185	1/1:8,6:15:3.01:160,3,0	./.	1/1:13,16:28:2.48:158,2,0	0/0:17,0:16:9.50:0,10,710	0/0:24,0:24:56.77:0,57,3592	0/0:16,0:20:33.58:0,34,1788	0/0:4,0:4:3.01:0,3,243
chr10	63130684	.	CA	C	10004.55	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=17.101;DP=597;FS=3.490;HRun=2;HaplotypeScore=88.1538;InbreedingCoeff=0.9865;MQ=83.16;MQ0=0;MQRankSum=-4.394;QD=32.17;ReadPosRankSum=1.899;VQSLOD=4.8513;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:99:0,99,1444	0/0:7,0:7:21.05:0,21,274	0/0:17,0:17:51.17:0,51,754	0/0:26,0:26:74.48:0,74,899	0/0:23,0:23:69.13:0,69,955	1/1:0,22:22:60.19:743,60,0	1/1:1,23:24:63.20:780,63,0	0/0:22,0:22:66.21:0,66,943	0/0:21,0:21:63.20:0,63,914	1/1:1,20:21:60.18:732,60,0	1/1:0,14:14:36.11:445,36,0	1/1:0,20:20:48.15:593,48,0	1/1:0,15:15:42.13:517,42,0	1/1:1,20:21:54.16:656,54,0	1/1:0,21:21:54.17:668,54,0	1/1:3,16:19:6.74:549,7,0	0/0:26,0:26:78.19:0,78,1086	0/0:42,0:42:99:0,126,1813	1/1:0,18:18:54.07:598,54,0	1/1:0,14:14:42.09:499,42,0	1/1:1,27:28:72.23:891,72,0	0/0:25,0:25:69.10:0,69,954	0/0:21,0:21:63.20:0,63,913	0/0:23,0:23:69.17:0,69,942	1/1:0,26:27:72.23:890,72,0	1/1:2,21:23:62.93:666,63,0	1/1:0,14:14:35.82:444,36,0	1/1:0,10:10:27.08:334,27,0
chr10	63131664	.	TG	T	657.05	PASS	AB=0.875;AC=7;AF=0.125;AN=56;BaseQRankSum=2.659;DP=477;FS=10.450;HRun=9;HaplotypeScore=70.7068;InbreedingCoeff=0.8415;MQ=69.07;MQ0=0;MQRankSum=-0.044;QD=13.41;ReadPosRankSum=0.403;VQSLOD=2.4715;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:96.27:0,96,1098	0/0:6,0:6:18.05:0,18,208	0/1:12,1:11:5.66:6,0,180	0/0:9,0:6:12.04:0,12,139	0/0:21,0:21:51.14:0,51,575	0/0:22,0:23:69:0,69,748	0/0:10,0:10:27.08:0,27,312	0/0:27,0:27:31.78:0,32,522	0/0:22,0:22:47.96:0,48,553	0/0:23,0:23:45.12:0,45,509	0/0:19,0:19:45.13:0,45,519	0/0:6,0:6:15.04:0,15,173	0/0:20,0:20:48.13:0,48,544	0/0:12,0:12:36.11:0,36,415	0/0:9,0:9:18.04:0,18,199	0/0:15,0:15:39.10:0,39,440	0/0:25,0:25:60.18:0,60,692	0/0:29,0:29:75.22:0,75,866	0/0:13,0:13:30.09:0,30,346	0/0:24,0:24:45.11:0,45,499	0/0:22,0:22:57.16:0,57,648	1/1:1,6:7:18.01:164,18,0	1/1:2,16:18:38.98:357,39,0	1/1:0,10:10:30.02:275,30,0	0/0:18,1:18:23.68:0,24,526	0/0:12,0:12:33:0,33,354	0/0:21,0:21:51.15:0,51,588	0/0:7,0:7:15.04:0,15,173
chr10	63132516	.	GA	G	13316.56	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=4.619;DP=693;FS=0.000;HRun=2;HaplotypeScore=73.1443;InbreedingCoeff=0.9999;MQ=90.54;MQ0=0;MQRankSum=-5.309;QD=35.70;ReadPosRankSum=4.270;VQSLOD=5.3129;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:38:99:0,117,1659	0/0:12,0:12:36.12:0,36,527	0/0:27,0:27:65.29:0,65,903	0/0:27,0:27:66.06:0,66,855	0/0:35,0:35:99:0,105,1533	1/1:0,16:16:42.14:545,42,0	1/1:0,18:18:48.16:623,48,0	0/0:40,0:40:99:0,117,1653	0/0:20,0:20:60.18:0,60,859	1/1:0,30:30:90.29:1168,90,0	1/1:0,17:17:51.17:661,51,0	1/1:0,19:19:57.19:740,57,0	1/1:0,16:16:45.15:584,45,0	1/1:0,17:17:39.13:506,39,0	1/1:0,34:34:93.30:1207,93,0	1/1:1,27:28:30.30:889,30,0	0/0:26,0:26:75.21:0,75,1074	0/0:28,0:28:78.26:0,78,1166	1/1:0,13:13:39.13:506,39,0	1/1:1,29:30:84.23:1071,84,0	1/1:1,31:32:87.28:1128,87,0	0/0:21,0:21:63.19:0,63,881	0/0:22,0:22:66.22:0,66,946	0/0:23,0:23:69.19:0,69,943	1/1:0,24:24:63.20:817,63,0	1/1:0,38:38:99:1435,114,0	1/1:0,21:21:51.17:659,51,0	1/1:0,20:20:60.20:778,60,0
chr10	63134685	.	G	GGATGA	451.26	PASS	AC=4;AF=0.077;AN=52;BaseQRankSum=6.139;DP=2836;DS;FS=2.938;HRun=0;HaplotypeScore=187.5640;InbreedingCoeff=0.7663;MQ=22.03;MQ0=1347;MQRankSum=1.284;QD=10.74;ReadPosRankSum=-4.709;VQSLOD=1.9938;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:70,0:46:43.31:0,43,784	0/0:24,0:11:21.07:0,21,463	./.	./.	0/0:31,0:15:14.99:0,15,246	0/0:78,0:18:11.98:0,12,170	0/0:213,0:59:38.54:0,39,767	0/0:74,0:2:6.02:0,6,134	0/0:81,0:45:50.47:0,50,1084	0/0:181,0:42:99:0,101,2126	0/0:87,0:19:9.03:0,9,182	0/0:177,0:72:41.40:0,41,834	0/0:150,0:49:64.58:0,65,1398	0/0:144,0:49:34.35:0,34,730	0/0:196,0:57:56.03:0,56,1214	0/0:172,0:50:33.20:0,33,595	0/0:33,0:25:54.08:0,54,963	0/0:29,0:20:39.03:0,39,747	0/0:93,0:7:21.07:0,21,455	0/0:95,0:31:32.45:0,32,629	0/0:249,0:65:39.98:0,40,1196	1/1:17,9:15:11.73:389,12,0	1/1:9,7:8:5.92:167,6,0	0/0:25,0:8:5.49:0,5,115	0/0:107,0:26:14.52:0,15,307	0/0:159,0:49:93.22:0,93,1880	0/0:140,0:48:25.87:0,26,709	0/0:87,0:30:29.97:0,30,662
chr10	63134748	.	TGAGGATACTGAGGAA	T	446.88	PASS	AB=0.991;AC=27;AF=0.563;AN=48;BaseQRankSum=3.417;DP=1550;DS;FS=13.080;HRun=0;HaplotypeScore=146.0468;InbreedingCoeff=0.4062;MQ=20.74;MQ0=695;MQRankSum=1.131;QD=0.35;ReadPosRankSum=-6.018;VQSLOD=-0.3188;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:29:54.13:0,54,814	0/0:7,0:6:6.43:0,6,85	./.	./.	0/0:24,0:18:47.19:0,47,865	1/1:34,0:10:2.94:18,3,0	0/1:110,0:35:5.08:55,0,5	0/0:18,0:7:18.05:0,18,299	0/0:35,0:23:33.04:0,33,489	0/1:106,0:28:78.05:78,0,305	1/1:33,11:19:7.54:63,8,0	1/1:83,0:26:4.74:12,5,0	1/1:79,0:21:8.27:21,8,0	1/1:84,0:23:4.19:21,4,0	1/1:129,0:29:6.81:16,7,0	1/1:98,0:20:3.58:19,4,0	0/0:22,0:17:45.04:0,45,704	0/0:25,0:14:24.08:0,24,464	0/1:59,3:9:33.79:68,0,34	1/1:55,0:24:9.48:89,9,0	1/1:163,0:42:7.39:24,7,0	0/0:12,0:7:0.47:0,0,1	./.	./.	0/1:37,0:7:0:0,0,0	0/1:93,0:27:99:104,0,287	1/1:67,0:25:2.80:7,3,0	1/1:38,0:19:3.06:8,3,0
chr10	63134865	.	G	GGGTGA	392.86	PASS	AB=0.943;AC=9;AF=0.205;AN=44;BaseQRankSum=2.365;DP=3079;DS;FS=13.936;HRun=0;HaplotypeScore=141.3451;InbreedingCoeff=-0.0825;MQ=17.28;MQ0=1861;MQRankSum=-4.643;QD=0.36;ReadPosRankSum=-1.946;VQSLOD=1.8447;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:18:11.99:0,12,214	0/0:19,0:4:3.01:0,3,60	./.	./.	0/0:29,0:10:17.91:0,18,256	0/0:127,1:25:9.03:0,9,195	0/0:154,1:23:23.68:0,24,429	./.	0/0:48,0:17:29.85:0,30,421	0/0:245,0:40:99:0,108,2045	0/0:138,0:14:17.93:0,18,282	0/1:181,1:54:99:99,0,832	0/0:170,1:45:41.97:0,42,848	0/0:158,2:49:65.43:0,65,1242	0/1:247,3:79:99:104,0,1401	0/1:203,2:52:3.21:3,0,1197	./.	./.	0/0:102,0:6:11.90:0,12,166	0/0:183,0:23:20.94:0,21,390	0/0:238,1:59:63.49:0,63,1135	0/1:3,0:3:18.26:72,0,18	1/1:4,0:5:1.05:152,1,0	./.	0/0:139,0:22:17.85:0,18,206	0/1:190,1:34:7.17:7,0,1461	0/1:155,1:37:49.98:50,0,864	0/1:104,0:26:25.76:26,0,630
chr10	63135002	.	GGGAGGATAC	G	442.78	PASS	AB=0.992;AC=13;AF=0.283;AN=46;BaseQRankSum=5.143;DP=1298;FS=17.117;HRun=0;HaplotypeScore=69.5304;InbreedingCoeff=0.0297;MQ=22.96;MQ0=788;MQRankSum=-2.090;QD=0.67;ReadPosRankSum=0.574;VQSLOD=0.3348;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:35:35.94:0,36,646	0/0:11,0:6:1.75:0,2,58	0/0:26,0:1:3.01:0,3,69	0/0:38,0:5:8.37:0,8,63	0/0:16,0:15:26.96:0,27,492	./.	1/1:43,0:2:3.01:56,3,0	0/0:39,0:18:42.09:0,42,1011	0/0:57,0:44:62.86:0,63,1595	0/0:61,0:3:6.02:0,6,127	./.	0/1:91,3:18:96.16:194,0,96	0/1:100,0:11:45.15:45,0,61	0/1:88,0:14:54.41:54,0,61	0/0:104,0:17:0:0,0,0	0/1:85,0:14:25.90:26,0,62	0/0:29,0:17:12.04:0,12,384	0/0:34,0:10:3.01:0,3,113	0/0:25,0:3:3.01:0,3,43	1/1:47,0:4:1.25:3,1,0	0/1:90,0:11:0.34:0,0,0	0/1:5,0:3:16.94:54,0,17	./.	./.	./.	0/0:55,0:9:5.95:0,6,109	0/1:75,1:16:63.69:64,0,71	1/1:34,1:7:3.01:71,3,0
chr10	63135153	.	TGAGGA	T	912.25	PASS	AB=0.964;AC=8;AF=0.143;AN=56;BaseQRankSum=8.531;DP=792;FS=39.247;HRun=0;HaplotypeScore=239.0602;InbreedingCoeff=-0.1608;MQ=56.16;MQ0=28;MQRankSum=-7.924;QD=3.40;ReadPosRankSum=-5.498;VQSLOD=-0.1263;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:78.27:0,78,2328	0/0:11,0:11:30.10:0,30,890	0/0:31,0:23:63.90:0,64,1496	0/0:35,0:27:42.85:0,43,1561	0/0:17,0:17:39.13:0,39,1147	0/0:19,0:18:29:0,29,860	0/0:35,0:33:31.18:0,31,2045	0/0:33,0:32:93.32:0,93,2723	0/0:27,0:27:78.25:0,78,2326	0/0:42,0:38:64.75:0,65,2229	0/0:17,6:20:41.27:0,41,1022	0/1:39,0:33:99:259,0,1521	0/1:32,0:29:99:136,0,1434	0/1:40,0:37:92.04:92,0,2112	0/1:36,0:35:99:289,0,1542	0/1:36,0:34:99:138,0,2253	0/0:26,0:26:66.23:0,66,1964	0/0:20,0:20:57.20:0,57,1657	0/0:31,0:29:60.76:0,61,1875	0/0:20,0:19:16.97:0,17,1035	0/0:61,0:58:75.02:0,75,3630	0/0:11,0:11:22.01:0,22,495	0/0:2,5:7:6.02:0,6,138	0/1:19,13:29:26.42:26,0,757	0/0:27,0:23:31.97:0,32,1714	0/0:15,0:15:19.02:0,19,1117	0/1:37,0:27:99:101,0,1115	0/1:16,0:15:0.28:0,0,950
chr10	63135490	.	TTGGTG	T	20105.08	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=15.723;DP=729;FS=4.188;HRun=0;HaplotypeScore=178.7484;InbreedingCoeff=0.9975;MQ=81.15;MQ0=0;MQRankSum=-18.863;QD=48.68;ReadPosRankSum=0.842;VQSLOD=4.4857;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,144,4364	0/0:8,0:8:24.08:0,24,736	0/0:32,0:32:84.28:0,84,2420	0/0:27,0:27:54.64:0,55,1710	0/0:13,0:13:36.12:0,36,1083	1/1:2,29:31:78.22:1580,78,0	1/1:1,28:29:69.19:1359,69,0	0/0:18,0:18:51.17:0,51,1408	0/0:24,0:24:69.24:0,69,2073	1/1:2,33:35:90.28:1787,90,0	1/1:1,15:16:35.99:626,36,0	1/1:0,19:19:54.19:1111,54,0	1/1:4,31:35:90.31:1862,90,0	1/1:1,24:25:56.87:1170,57,0	1/1:3,31:34:81.28:1693,81,0	1/1:4,24:28:69.24:1424,69,0	0/0:29,0:29:87.30:0,87,2648	0/0:30,0:30:78.27:0,78,2319	1/1:1,22:23:63.19:1246,63,0	1/1:0,18:18:45.01:768,45,0	1/1:12,30:42:86.91:1408,87,0	0/0:26,0:26:72.25:0,72,2198	0/0:22,0:22:60.21:0,60,1809	0/0:37,0:37:99:0,108,3269	1/1:0,19:19:54.18:1107,54,0	1/1:4,22:26:69.24:1433,69,0	1/1:4,23:27:60.16:1215,60,0	1/1:1,5:6:15.05:314,15,0
chr10	63135668	.	A	AC	19619.77	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-1.336;DP=691;FS=2.157;HRun=1;HaplotypeScore=81.8526;InbreedingCoeff=0.9993;MQ=78.36;MQ0=0;MQRankSum=-4.304;QD=40.62;ReadPosRankSum=2.066;VQSLOD=5.5353;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,123,1548	0/0:7,0:7:21.07:0,21,273	0/0:19,0:19:57.17:0,57,703	0/0:18,0:18:45:0,45,549	0/0:16,0:16:45.13:0,45,569	1/1:3,22:25:69.19:1008,69,0	1/1:1,26:27:69.15:984,69,0	0/0:29,0:29:87.27:0,87,1107	0/0:24,0:24:72.23:0,72,935	1/1:0,22:22:66.22:989,66,0	1/1:2,13:15:42.14:617,42,0	1/1:1,29:30:72.24:1071,72,0	1/1:1,20:21:54.18:799,54,0	1/1:0,17:17:51.17:755,51,0	1/1:7,27:34:93.29:1352,93,0	1/1:2,23:25:75.24:1093,75,0	0/0:35,0:35:99:0,105,1362	0/0:18,0:18:54.16:0,54,686	1/1:0,26:26:75.25:1122,75,0	1/1:0,14:14:39.09:559,39,0	1/1:1,40:41:99:1664,111,0	1/1:0,35:35:93.32:1393,93,0	1/1:0,23:23:63.21:939,63,0	1/1:1,33:34:87.29:1301,87,0	1/1:0,21:21:57.19:854,57,0	1/1:1,32:33:93.31:1392,93,0	1/1:1,23:24:69.22:1014,69,0	1/1:0,16:16:48.16:714,48,0
chr10	63135929	.	AG	A	2989.97	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=10.896;DP=654;FS=3.916;HRun=2;HaplotypeScore=62.5893;InbreedingCoeff=0.9994;MQ=78.25;MQ0=0;MQRankSum=-1.594;QD=32.50;ReadPosRankSum=2.258;VQSLOD=3.5828;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,144,2118	0/0:9,0:9:27.09:0,27,405	0/0:28,0:26:66.18:0,66,960	0/0:22,0:21:51.06:0,51,713	0/0:20,0:20:60.19:0,60,877	0/0:22,0:22:63.20:0,63,924	0/0:28,0:28:84.28:0,84,1244	0/0:29,0:28:84.25:0,84,1189	0/0:22,0:22:63.20:0,63,922	0/0:24,0:24:72.24:0,72,1079	0/0:14,0:14:42.14:0,42,629	0/0:24,0:24:72.24:0,72,1076	0/0:14,0:14:42.10:0,42,602	0/0:14,0:14:42.13:0,42,608	0/0:25,0:25:75.24:0,75,1101	0/0:24,0:24:72.24:0,72,1079	0/0:44,0:44:99:0,129,1912	0/0:19,0:19:57.19:0,57,854	0/0:26,0:26:72.22:0,72,1053	0/0:19,0:19:57.12:0,57,826	0/0:16,0:16:48.16:0,48,717	1/1:0,27:27:72.17:914,72,0	1/1:0,20:20:54.18:700,54,0	1/1:1,44:45:99:1519,117,0	0/0:19,0:19:57.18:0,57,833	0/0:17,0:17:51.17:0,51,765	0/0:24,0:24:72.24:0,72,1079	0/0:10,0:10:30.10:0,30,449
chr10	63137972	.	TG	T	1896.03	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-3.141;DP=654;FS=0.423;HRun=9;HaplotypeScore=93.2805;InbreedingCoeff=0.8622;MQ=84.17;MQ0=0;MQRankSum=-0.697;QD=20.17;ReadPosRankSum=0.105;VQSLOD=3.6788;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,1:41:65.60:0,66,958	1/1:2,9:11:24:219,24,0	0/0:21,0:21:2.31:0,2,308	0/0:23,0:23:30.36:0,30,352	0/0:25,0:25:72.21:0,72,830	0/0:14,1:15:14.66:0,15,411	0/0:38,0:40:96.01:0,96,1037	1/1:4,23:27:63.02:572,63,0	0/0:21,0:21:57.16:0,57,648	0/0:24,1:25:32.71:0,33,630	0/0:18,0:18:45.13:0,45,512	0/0:24,0:24:63.16:0,63,707	0/0:20,0:20:54.16:0,54,623	0/0:19,0:19:36.11:0,36,415	0/0:21,0:21:54.08:0,54,593	0/0:15,0:15:42.12:0,42,484	1/1:1,34:35:93.05:851,93,0	1/1:5,16:21:45.02:412,45,0	0/0:14,0:14:27.08:0,27,311	0/0:13,1:14:5.59:0,6,296	0/0:59,0:59:99:0,144,1614	0/0:23,0:24:66.03:0,66,742	0/0:12,1:13:6.10:0,6,319	0/0:34,2:35:32.31:0,32,869	0/0:12,1:13:5.63:0,6,319	0/0:29,1:30:41.72:0,42,725	0/0:20,1:21:29.70:0,30,596	0/0:8,0:8:24.06:0,24,267
chr10	63138066	.	GGTGTGTGTGT	G	1674.08	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=4.500;DP=603;FS=0.000;HRun=0;HaplotypeScore=209.2261;InbreedingCoeff=0.7417;MQ=61.20;MQ0=6;MQRankSum=-5.838;QD=24.62;ReadPosRankSum=0.202;VQSLOD=2.8605;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:39.13:0,39,1269	0/0:5,0:6:13.57:0,14,193	0/0:28,0:25:6.02:0,6,87	0/0:19,0:15:3.01:0,3,44	0/0:14,0:14:21.07:0,21,807	0/0:17,0:17:12.04:0,12,273	0/0:38,0:39:24.55:0,25,861	0/0:21,0:21:28.87:0,29,421	0/0:14,0:23:31.61:0,32,362	0/0:23,0:21:48.16:0,48,1752	0/0:13,0:12:15.05:0,15,356	0/0:30,0:29:22.01:0,22,463	0/0:20,0:21:27.09:0,27,946	0/0:24,0:24:21.07:0,21,615	0/0:22,0:21:12.04:0,12,300	0/0:19,0:20:12.04:0,12,297	0/0:17,0:28:53.76:0,54,830	0/0:7,0:13:10.85:0,11,170	0/0:16,0:16:24.08:0,24,1015	0/0:13,0:14:5.67:0,6,168	0/0:49,0:50:36.48:0,36,770	1/1:7,9:16:18.02:455,18,0	1/1:8,16:24:39.09:1083,39,0	1/1:17,11:28:9.50:270,9,0	0/0:20,0:20:5.58:0,6,279	0/0:21,0:21:42.14:0,42,1476	0/0:6,0:6:6.96:0,7,182	0/0:13,0:11:12.04:0,12,381
chr10	63140896	.	CGCGG	C	623.76	PASS	AC=16;AF=0.800;AN=20;BaseQRankSum=2.599;DP=68;FS=2.315;HRun=0;HaplotypeScore=15.4644;InbreedingCoeff=0.4318;MQ=65.31;MQ0=1;MQRankSum=-0.047;QD=13.86;ReadPosRankSum=-0.709;VQSLOD=2.4653;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:2,0:2:3.01:0,3,74	./.	./.	./.	./.	./.	1/1:3,3:6:9.03:150,9,0	./.	./.	./.	./.	1/1:2,0:2:5.90:41,6,0	1/1:0,1:1:3.01:50,3,0	./.	1/1:1,1:2:3.01:50,3,0	./.	0/0:8,0:8:8.95:0,9,165	./.	1/1:2,2:4:6.02:89,6,0	./.	1/1:8,14:22:12.04:201,12,0	./.	./.	1/1:4,3:7:6.02:100,6,0	./.	./.	./.	1/1:1,0:1:3.01:36,3,0
chr10	63142492	.	T	TAAA	16089.91	PASS	AB=0.556;AC=36;AF=0.643;AN=56;BaseQRankSum=-5.696;DP=606;FS=10.135;HRun=9;HaplotypeScore=88.8622;InbreedingCoeff=0.8444;MQ=78.50;MQ0=0;MQRankSum=-6.010;QD=38.22;ReadPosRankSum=1.826;VQSLOD=3.7361;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:66.18:0,66,833	0/0:7,0:7:18.06:0,18,227	0/0:17,0:17:39.02:0,39,458	0/0:16,0:16:21.10:0,21,298	0/0:26,0:26:66.17:0,66,834	1/1:2,19:22:63.19:1199,63,0	1/1:7,12:19:45.11:794,45,0	0/0:26,0:26:63.18:0,63,785	0/0:18,0:18:48.13:0,48,606	1/1:7,15:26:60.18:1087,60,0	1/1:6,20:27:63.22:1183,63,0	1/1:2,14:16:42.14:819,42,0	1/1:2,11:13:36.12:706,36,0	1/1:3,10:14:32.12:546,32,0	1/1:2,21:27:66.23:1269,66,0	1/1:5,23:28:69.24:1338,69,0	0/0:37,0:37:96.27:0,96,1212	0/0:12,0:12:21.02:0,21,265	1/1:4,16:23:54.16:964,54,0	1/1:7,18:28:60.11:1019,60,0	1/1:3,8:11:21.07:414,21,0	1/1:3,0:23:16.74:41,17,0	0/1:4,0:16:14.09:14,0,20	0/1:3,0:20:15.31:19,0,15	1/1:4,30:35:93.30:1766,93,0	1/1:11,24:35:78.27:1530,78,0	1/1:6,21:27:57.16:1085,57,0	1/1:1,10:11:15.05:296,15,0
chr10	63142575	.	GTCTCTCTCTC	G	7369.30	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=2.909;DP=531;FS=11.524;HRun=0;HaplotypeScore=197.1741;InbreedingCoeff=0.8770;MQ=73.17;MQ0=22;MQRankSum=-4.265;QD=29.71;ReadPosRankSum=0.818;VQSLOD=3.3057;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:47.94:0,48,1090	0/0:6,0:6:12.03:0,12,337	0/0:46,0:29:14.94:0,15,335	0/0:48,0:21:20.52:0,21,677	0/0:22,0:20:36.06:0,36,1466	1/1:5,7:12:9.03:224,9,0	1/1:14,5:20:9.03:165,9,0	0/0:33,0:33:36.11:0,36,1053	0/0:16,0:16:27.09:0,27,1052	1/1:20,6:27:42.14:1128,42,0	1/1:10,7:15:12.04:352,12,0	1/1:8,1:9:15.05:364,15,0	1/1:12,0:13:9.03:232,9,0	1/1:6,2:8:9.02:156,9,0	1/1:13,4:18:24.08:656,24,0	1/1:11,5:16:21.07:581,21,0	0/0:30,0:30:30.10:0,30,1054	0/0:14,0:13:24.08:0,24,983	1/1:8,2:10:12.04:362,12,0	1/1:19,8:27:39.08:925,39,0	1/1:9,1:9:3.01:72,3,0	0/0:12,0:11:14.72:0,15,374	0/0:14,0:14:9.01:0,9,325	0/0:19,0:17:3.01:0,3,125	1/1:6,5:11:7.94:270,8,0	1/1:13,3:16:33.10:817,33,0	1/1:20,0:19:24.06:639,24,0	1/1:3,4:7:15.05:426,15,0
chr10	63142594	.	TCTCTCTCTCTCTCACACACACACACACACA	T	11488.10	PASS	AB=0.980;AC=28;AF=0.500;AN=56;BaseQRankSum=8.046;DP=499;FS=2.325;HRun=0;HaplotypeScore=323.6643;InbreedingCoeff=0.5205;MQ=51.46;MQ0=26;MQRankSum=-3.963;QD=42.39;ReadPosRankSum=3.303;VQSLOD=2.8017;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:33:60.21:0,60,4013	0/0:6,0:6:18.02:0,18,682	0/0:23,0:9:15.04:0,15,453	0/0:36,0:11:19.20:0,19,803	0/0:24,0:22:36.54:0,37,2515	0/1:19,0:19:8.84:293,0,9	0/1:18,0:15:13:176,0,13	0/0:22,0:22:54.10:0,54,1654	0/0:16,0:16:39.12:0,39,2195	0/1:26,0:25:62.65:1808,0,63	1/1:19,0:17:12.04:355,12,0	0/1:8,0:8:3.93:461,0,4	1/1:13,1:13:9.03:599,9,0	1/1:11,0:10:6:203,6,0	1/1:18,1:19:24.08:1309,24,0	1/1:17,0:16:24.08:1212,24,0	0/0:27,0:26:37.87:0,38,1703	0/0:13,0:12:24.08:0,24,1476	1/1:7,0:6:15.05:428,15,0	1/1:29,0:29:7.38:977,7,0	1/1:10,0:9:3.01:95,3,0	0/1:15,0:14:6.94:7,0,481	0/0:15,0:15:12.03:0,12,425	0/0:12,0:10:6.48:0,6,175	1/1:10,0:10:8.54:195,9,0	1/1:18,0:17:24.44:1137,24,0	0/1:19,2:21:34.03:1307,0,34	1/1:8,1:9:24.08:925,24,0
chr10	63142596	.	TCTCTCTCTCTCACACACACACACACACA	T	13957.63	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=3.031;DP=476;FS=5.905;HRun=0;HaplotypeScore=288.3555;InbreedingCoeff=0.8843;MQ=50.36;MQ0=24;MQRankSum=-4.899;QD=56.05;ReadPosRankSum=1.302;VQSLOD=2.9275;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:32:63.21:0,63,3680	0/0:6,0:6:15.04:0,15,538	0/0:17,0:7:12.04:0,12,319	0/0:31,0:10:20.52:0,21,677	0/0:24,0:22:36.54:0,37,2206	1/1:17,1:18:8.36:425,8,0	1/1:17,0:14:9.03:282,9,0	0/0:22,0:22:45.14:0,45,1254	0/0:15,0:15:36.12:0,36,1871	1/1:27,0:25:57.19:2102,57,0	1/1:17,1:16:12.04:497,12,0	1/1:7,1:8:18.06:626,18,0	1/1:4,10:13:9.03:658,9,0	1/1:10,1:10:9.02:302,9,0	1/1:14,4:19:24.08:1499,24,0	1/1:12,4:16:24.08:1430,24,0	0/0:27,0:26:22.91:0,23,1446	0/0:13,0:12:24.08:0,24,1262	1/1:7,0:6:15.05:552,15,0	1/1:26,1:29:36.69:1292,37,0	1/1:11,0:10:3.01:72,3,0	0/0:14,0:13:15.05:0,15,374	0/0:14,0:14:9.03:0,9,325	0/0:11,0:9:3.48:0,3,126	1/1:9,0:9:8.49:271,8,0	1/1:17,1:17:45.14:1453,45,0	1/1:15,2:17:29.77:1471,30,0	1/1:9,0:9:24.08:1025,24,0
chr10	63142606	.	TCACACACACACACACACA	T	6368.33	PASS	AB=0.802;AC=30;AF=0.652;AN=46;BaseQRankSum=6.456;DP=420;FS=14.287;HRun=0;HaplotypeScore=219.0900;InbreedingCoeff=0.6282;MQ=38.57;MQ0=24;MQRankSum=-7.312;QD=26.53;ReadPosRankSum=1.060;VQSLOD=2.6517;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:33:54.18:0,54,2155	0/0:5,0:5:5.38:0,5,174	./.	./.	0/0:18,0:24:17.82:0,18,611	1/1:11,6:18:6.02:188,6,0	1/1:12,5:14:2.85:86,3,0	0/1:17,0:20:1.95:2,0,424	0/0:14,0:15:18.01:0,18,532	1/1:17,5:20:6.68:960,7,0	1/1:17,0:15:2.99:135,3,0	1/1:5,0:6:6.02:252,6,0	1/1:14,0:13:9.03:406,9,0	1/1:6,2:8:3.01:135,3,0	1/1:15,3:18:18.06:802,18,0	1/1:12,4:15:18.06:808,18,0	0/0:29,0:27:3.20:0,3,323	0/0:14,0:13:11.36:0,11,225	1/1:8,1:8:5.85:189,6,0	1/1:21,2:24:11.15:364,11,0	./.	./.	0/1:9,0:12:0:0,0,0	0/0:7,0:8:0.47:0,0,1	./.	1/1:12,2:14:17.92:634,18,0	1/1:6,0:12:17.72:812,18,0	1/1:6,2:9:17.99:595,18,0
chr10	63143242	.	C	CT	1060.88	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=3.857;DP=548;FS=12.338;HRun=4;HaplotypeScore=95.3449;InbreedingCoeff=0.9925;MQ=82.99;MQ0=1;MQRankSum=-2.246;QD=24.67;ReadPosRankSum=-1.825;VQSLOD=1.7685;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:46:99:0,120,1333	0/0:11,0:11:21.06:0,21,238	0/0:30,0:25:21.64:0,22,398	0/0:25,0:23:31.69:0,32,377	0/0:14,0:14:39.08:0,39,424	0/0:21,0:21:45.11:0,45,500	0/0:13,0:13:30.08:0,30,338	0/0:44,0:44:99:0,114,1241	0/0:17,0:17:51.13:0,51,567	0/0:16,0:16:36.09:0,36,397	0/0:20,0:20:48.07:0,48,528	0/0:17,0:17:42.09:0,42,458	0/0:14,0:14:20.85:0,21,238	0/0:11,0:11:27.08:0,27,305	0/0:15,0:15:38.84:0,39,426	0/0:22,0:22:51.09:0,51,563	0/0:24,0:24:66.13:0,66,715	0/0:22,0:22:42.96:0,43,572	0/0:25,0:24:63.04:0,63,640	0/0:15,0:15:36.10:0,36,408	0/0:19,0:19:33.05:0,33,346	1/1:0,14:14:36.09:471,36,0	1/1:6,9:15:39.04:482,39,0	1/1:4,10:14:21.02:250,21,0	0/0:13,0:13:33.08:0,33,364	0/0:16,0:16:39.08:0,39,420	0/0:21,0:21:48.07:0,48,525	0/0:12,0:12:24.07:0,24,272
chr10	63143252	.	C	CT	4353.78	PASS	AB=0.587;AC=34;AF=0.607;AN=56;BaseQRankSum=0.068;DP=536;FS=0.000;HRun=11;HaplotypeScore=80.7263;InbreedingCoeff=0.6248;MQ=79.64;MQ0=7;MQRankSum=-1.758;QD=14.32;ReadPosRankSum=0.699;VQSLOD=5.1317;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:51,1:52:78.53:0,79,764	0/0:10,0:12:19.92:0,20,145	0/0:26,1:22:23.26:0,23,166	0/0:23,0:19:3.45:0,3,93	0/0:14,0:14:25.84:0,26,184	1/1:6,12:18:6.82:251,7,0	1/1:2,9:11:4.46:221,4,0	0/0:29,0:31:34.16:0,34,246	0/0:16,0:16:26.85:0,27,209	1/1:8,9:16:0.77:174,1,0	1/1:5,15:20:18.85:373,19,0	1/1:5,12:18:6.79:242,7,0	0/1:3,10:13:10.32:80,0,10	1/1:2,10:12:3.82:220,4,0	1/1:1,14:15:33.07:335,33,0	0/1:3,16:19:1.38:350,0,1	0/0:28,1:29:49.52:0,50,569	0/0:23,0:25:45.34:0,45,333	1/1:13,10:24:21.09:377,21,0	1/1:6,10:15:32.99:313,33,0	1/1:4,11:15:24.01:233,24,0	1/1:9,0:14:17.33:102,17,0	1/1:8,0:13:20.39:125,20,0	1/1:4,0:14:14.32:76,14,0	0/1:7,6:14:45.65:111,0,46	1/1:5,8:13:27.28:237,27,0	1/1:6,14:22:41.89:398,42,0	0/1:3,9:12:5.20:134,0,5
chr10	63143639	.	TC	T	2183.89	PASS	AB=1.000;AC=45;AF=0.833;AN=54;BaseQRankSum=-4.367;DP=148;FS=8.727;HRun=2;HaplotypeScore=18.0092;InbreedingCoeff=0.5127;MQ=63.15;MQ0=1;MQRankSum=-2.541;QD=18.20;ReadPosRankSum=0.703;VQSLOD=2.5639;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,10:12:20.74:167,21,0	1/1:0,2:2:5.96:53,6,0	0/0:16,0:6:11.99:0,12,122	0/1:10,0:5:1.04:1,0,54	1/1:2,1:2:2.97:20,3,0	1/1:1,3:4:9.03:112,9,0	1/1:1,4:4:9.03:111,9,0	1/1:2,8:10:20.99:200,21,0	1/1:0,6:6:12.04:146,12,0	1/1:1,7:6:17.97:196,18,0	1/1:2,4:6:6.29:72,6,0	1/1:1,4:4:12:132,12,0	1/1:0,2:2:6.02:74,6,0	1/1:1,3:4:5.93:40,6,0	1/1:0,3:3:8.94:78,9,0	1/1:2,5:7:17.84:180,18,0	1/1:1,5:6:9.87:97,10,0	1/1:2,6:8:11.97:131,12,0	1/1:1,3:4:9.03:114,9,0	1/1:2,1:3:5.94:41,6,0	1/1:0,2:2:2.97:20,3,0	0/0:1,0:1:2.60:0,3,10	0/0:3,0:3:2.68:0,3,11	0/0:7,0:7:6.93:0,7,27	./.	1/1:0,4:4:12.04:148,12,0	1/1:0,4:4:12.04:149,12,0	1/1:0,1:1:3.01:38,3,0
chr10	63144767	.	TACACACAC	T	3166.71	PASS	AC=28;AF=0.560;AN=50;BaseQRankSum=-2.565;DP=558;FS=16.127;HRun=0;HaplotypeScore=164.3515;InbreedingCoeff=0.8036;MQ=63.94;MQ0=2;MQRankSum=-6.566;QD=10.56;ReadPosRankSum=-0.788;VQSLOD=1.7879;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:27:21.04:0,21,268	0/0:5,0:6:3:0,3,25	./.	0/0:16,0:14:6.02:0,6,81	0/0:9,0:17:29.97:0,30,282	1/1:6,8:15:8.52:160,9,0	1/1:11,8:20:5.75:51,6,0	0/0:20,0:24:18.01:0,18,214	0/0:19,0:27:20.99:0,21,244	1/1:11,4:15:9.03:205,9,0	1/1:9,4:14:3.01:76,3,0	1/1:7,11:17:9.03:227,9,0	1/1:18,13:31:20.92:526,21,0	1/1:10,8:19:6.02:142,6,0	1/1:17,15:33:23.87:542,24,0	1/1:12,11:23:12.04:302,12,0	0/0:15,0:28:44.96:0,45,599	0/0:9,0:14:19.61:0,20,201	./.	1/1:6,3:9:6.02:151,6,0	1/1:53,1:53:14.70:195,15,0	0/0:10,0:10:9.03:0,9,293	0/0:8,0:8:12.02:0,12,258	0/0:46,0:46:66.22:0,66,1908	1/1:11,5:16:5.05:81,5,0	1/1:12,5:17:15.05:324,15,0	1/1:8,6:14:15.05:378,15,0	./.
chr10	63144804	.	A	ACG	1027.98	PASS	AB=0.629;AC=4;AF=0.071;AN=56;BaseQRankSum=-1.658;DP=640;FS=5.796;HRun=0;HaplotypeScore=145.3335;InbreedingCoeff=0.3534;MQ=47.45;MQ0=21;MQRankSum=0.779;QD=16.58;ReadPosRankSum=1.187;VQSLOD=3.2743;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:31:47.78:0,48,378	0/0:1,0:1:2.98:0,3,22	0/0:27,0:7:15.90:0,16,100	0/0:31,0:2:2.92:0,3,17	0/0:16,0:16:45.32:0,45,354	0/0:23,0:23:31.53:0,32,254	0/0:30,0:29:38.84:0,39,308	0/0:33,0:31:18.74:0,19,643	0/0:19,0:18:29.91:0,30,239	0/0:18,0:16:44.91:0,45,385	0/0:12,0:12:11.66:0,12,96	0/0:27,0:27:38.35:0,38,295	0/0:26,0:26:42.02:0,42,309	0/0:28,0:28:38.35:0,38,312	0/0:31,0:31:41.37:0,41,325	0/0:23,0:22:32.86:0,33,262	0/0:27,0:27:55.47:0,55,416	0/0:19,0:19:43.31:0,43,342	0/0:10,0:8:3:0,3,160	0/0:12,0:12:29.85:0,30,227	0/0:70,0:68:99:0,114,933	0/1:4,9:12:47.53:48,0,55	0/1:4,4:7:8.97:50,0,9	1/1:25,16:38:67.12:1045,67,0	0/0:10,0:10:11.92:0,12,90	0/0:20,0:20:50.69:0,51,402	0/0:29,0:27:62.69:0,63,483	0/0:4,0:4:8.98:0,9,73
chr10	63146355	.	T	TG	8102.19	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=-9.783;DP=537;FS=0.000;HRun=7;HaplotypeScore=53.5815;InbreedingCoeff=0.9912;MQ=76.86;MQ0=0;MQRankSum=-1.553;QD=28.33;ReadPosRankSum=-0.169;VQSLOD=5.1371;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:98.78:0,99,929	0/0:3,0:3:9.01:0,9,87	0/0:17,0:17:36.65:0,37,323	0/0:10,0:10:25.87:0,26,205	0/0:19,0:19:57.09:0,57,550	1/1:3,14:17:45.14:540,45,0	1/1:4,17:21:35.98:435,36,0	0/0:26,0:26:60.08:0,60,575	0/0:22,0:22:63.10:0,63,606	1/1:6,8:14:27.08:326,27,0	1/1:0,12:12:33.10:398,33,0	1/1:2,15:17:36:435,36,0	1/1:2,10:12:33.06:381,33,0	1/1:0,15:15:36.11:432,36,0	1/1:1,19:20:36.11:434,36,0	1/1:4,8:12:30.09:359,30,0	0/0:31,0:31:81.11:0,81,775	0/0:13,0:13:29.99:0,30,275	1/1:3,16:19:45.13:530,45,0	1/1:4,13:17:42.13:507,42,0	1/1:4,35:39:96.29:1159,96,0	0/0:25,0:25:63.09:0,63,607	0/0:19,0:19:48.08:0,48,463	0/0:26,0:26:51.06:0,51,487	1/1:1,18:19:51.16:616,51,0	1/1:3,14:17:48.15:579,48,0	1/1:5,14:19:42.02:507,42,0	1/1:2,14:16:39.11:463,39,0
chr10	63146441	.	C	CT	10613.89	PASS	AB=0.739;AC=37;AF=0.661;AN=56;BaseQRankSum=-9.446;DP=637;FS=3.477;HRun=9;HaplotypeScore=69.6017;InbreedingCoeff=0.7695;MQ=81.60;MQ0=0;MQRankSum=0.529;QD=23.43;ReadPosRankSum=1.574;VQSLOD=5.8847;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:89.95:0,90,781	0/0:9,0:9:26.97:0,27,229	0/0:21,0:21:6.37:0,6,248	0/1:19,0:18:3.19:3,0,135	0/0:31,0:31:83.98:0,84,729	1/1:3,25:28:17.99:646,18,0	0/1:3,13:15:22.03:235,0,22	0/0:27,0:27:53.95:0,54,469	0/0:19,0:19:44.96:0,45,386	1/1:3,26:29:75.20:830,75,0	1/1:8,10:18:16.06:405,16,0	1/1:4,7:13:19.94:238,20,0	1/1:1,31:32:84.02:909,84,0	1/1:7,12:19:48.11:515,48,0	1/1:7,10:17:30.08:332,30,0	1/1:4,14:18:48.10:518,48,0	0/0:20,0:20:53.95:0,54,463	0/0:22,0:22:62.96:0,63,540	1/1:13,10:24:20.34:416,20,0	1/1:2,20:23:59.93:620,60,0	1/1:8,14:22:48.13:528,48,0	1/1:4,24:30:71.82:743,72,0	1/1:2,20:22:51.14:564,51,0	1/1:2,23:25:60.16:664,60,0	1/1:4,15:19:48.13:526,48,0	1/1:3,30:33:64.09:892,64,0	1/1:0,28:28:69.19:763,69,0	0/1:9,9:18:19.01:266,0,19
chr10	63146502	.	C	CTCCTTCCTTCCT	17526.38	PASS	AB=0.811;AC=34;AF=0.607;AN=56;BaseQRankSum=8.103;DP=673;FS=6.078;HRun=0;HaplotypeScore=316.1052;InbreedingCoeff=0.8046;MQ=55.64;MQ0=7;MQRankSum=-9.817;QD=38.86;ReadPosRankSum=-1.768;VQSLOD=3.0595;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:43.30:0,43,1842	0/0:11,0:11:18.02:0,18,325	0/0:13,0:11:2.98:0,3,21	0/0:16,0:11:6.01:0,6,79	0/0:20,0:20:21.02:0,21,452	1/1:28,0:28:53.32:1544,53,0	1/1:26,0:23:45.13:888,45,0	0/0:36,0:34:22.23:0,22,265	0/1:9,12:23:52.61:657,0,53	1/1:28,0:28:39.09:937,39,0	1/1:23,0:23:39.10:824,39,0	1/1:18,0:17:42.14:876,42,0	1/1:28,0:29:54.10:1458,54,0	1/1:27,0:27:54.02:1005,54,0	1/1:18,0:18:42.14:1005,42,0	1/1:18,0:18:45.14:949,45,0	0/0:24,0:24:57.17:0,57,1651	0/0:24,0:24:37.59:0,38,1146	1/1:23,0:20:25.11:702,25,0	1/1:38,0:38:69.13:1532,69,0	1/1:28,0:27:35.76:692,36,0	0/0:24,0:24:33.08:0,33,696	0/0:17,0:17:27.07:0,27,542	0/1:27,0:26:99:176,0,629	1/1:34,0:34:56.97:1598,57,0	1/1:30,0:30:57.08:1534,57,0	1/1:17,0:17:33.11:847,33,0	1/1:16,0:16:18.05:300,18,0
chr10	63146525	.	CT	C	7584.37	PASS	AB=0.714;AC=22;AF=0.393;AN=56;BaseQRankSum=2.093;DP=681;FS=16.332;HRun=2;HaplotypeScore=151.5424;InbreedingCoeff=-0.2157;MQ=47.66;MQ0=15;MQRankSum=-2.638;QD=16.38;ReadPosRankSum=1.857;VQSLOD=3.6484;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,100,1531	0/0:11,0:11:33.11:0,33,482	0/0:23,0:15:29.36:0,29,437	0/0:19,0:8:3.40:0,3,191	0/0:17,0:17:51.12:0,51,671	0/1:16,12:28:99:423,0,402	0/1:13,17:27:99:500,0,386	0/0:29,0:25:67.44:0,67,892	0/0:26,0:26:26.79:0,27,435	0/1:13,11:24:99:444,0,252	0/1:14,8:22:99:267,0,409	0/1:11,6:16:99:141,0,362	0/1:10,12:22:99:408,0,219	0/1:21,7:27:99:299,0,569	0/1:13,8:21:99:367,0,275	0/1:11,10:21:99:312,0,309	0/0:30,0:30:84.25:0,84,1236	0/0:25,0:25:75.14:0,75,1046	0/1:16,8:19:99:266,0,336	0/1:28,12:39:99:426,0,769	0/1:21,13:33:99:457,0,426	1/1:1,17:18:54.13:680,54,0	1/1:3,18:21:55.33:713,55,0	1/1:8,16:22:29.07:566,29,0	0/1:15,13:28:99:387,0,308	0/1:15,15:30:99:537,0,386	0/1:13,8:21:99:302,0,284	0/1:7,3:10:89.78:90,0,208
chr10	63146539	.	TC	T	1195.72	PASS	AB=0.848;AC=16;AF=0.286;AN=56;BaseQRankSum=12.742;DP=651;FS=2.915;HRun=3;HaplotypeScore=171.6875;InbreedingCoeff=-0.3953;MQ=48.16;MQ0=10;MQRankSum=-7.732;QD=3.20;ReadPosRankSum=0.250;VQSLOD=0.1049;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:98.05:0,98,1386	0/0:10,0:10:27.06:0,27,366	0/0:30,0:15:42.12:0,42,582	0/0:22,1:9:18.44:0,18,284	0/0:13,0:13:36.12:0,36,517	0/1:21,5:26:99:115,0,592	0/1:30,2:29:9.98:10,0,882	0/0:22,0:20:51.17:0,51,724	0/0:21,0:21:44.33:0,44,572	0/1:19,3:22:30.82:31,0,622	0/1:13,3:16:71.59:72,0,388	0/1:13,4:16:99:117,0,245	0/1:21,4:25:34.42:34,0,671	0/1:20,8:28:99:192,0,445	0/1:17,6:23:99:115,0,535	0/1:18,5:23:81.41:81,0,502	0/0:34,0:34:96.30:0,96,1351	0/0:26,0:26:78.24:0,78,1101	0/1:16,1:15:46.52:47,0,351	0/1:21,11:31:99:244,0,560	0/1:26,2:28:23.15:23,0,687	0/0:17,0:17:51.17:0,51,716	0/0:24,1:25:54.94:0,55,918	0/0:21,0:19:44.66:0,45,668	0/1:18,6:24:89.07:89,0,537	0/1:26,4:30:87.14:87,0,788	0/1:16,5:21:85.53:86,0,493	0/1:8,1:9:12.40:12,0,193
chr10	63146567	.	CCTTT	C	2209.47	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=6.202;DP=662;FS=20.472;HRun=0;HaplotypeScore=191.0097;InbreedingCoeff=0.9989;MQ=51.87;MQ0=3;MQRankSum=-5.485;QD=36.22;ReadPosRankSum=0.465;VQSLOD=2.3852;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:79.98:0,80,2201	0/0:9,0:9:27.09:0,27,706	0/0:32,0:17:32.13:0,32,549	0/0:26,0:14:28.20:0,28,381	0/0:19,0:19:57.12:0,57,1174	0/0:25,0:25:66.54:0,67,1405	0/0:23,0:22:51.64:0,52,1226	0/0:21,0:21:57.17:0,57,1157	0/0:19,0:19:44.15:0,44,1045	0/0:27,0:27:72.09:0,72,1518	0/0:18,0:18:43.02:0,43,988	0/0:12,0:12:32.74:0,33,565	0/0:32,0:32:80.55:0,81,1624	0/0:30,0:30:64.30:0,64,1459	0/0:19,0:19:42.58:0,43,973	0/0:28,0:28:62.68:0,63,1483	0/0:33,0:33:95.07:0,95,2197	0/0:24,0:24:72.19:0,72,1635	0/0:16,0:16:41.80:0,42,738	0/0:28,0:28:65.23:0,65,1326	0/0:30,0:30:68.40:0,68,1735	1/1:7,11:18:51.13:825,51,0	1/1:6,17:23:60.11:962,60,0	1/1:12,8:19:36.04:565,36,0	0/0:24,0:24:51.77:0,52,1146	0/0:31,0:31:84.86:0,85,1922	0/0:28,0:28:66.65:0,67,1503	0/0:10,0:10:29.73:0,30,641
chr10	63146779	.	G	GT	768.82	PASS	AB=0.912;AC=16;AF=0.286;AN=56;BaseQRankSum=-0.760;DP=653;FS=2.766;HRun=14;HaplotypeScore=97.5855;InbreedingCoeff=0.1062;MQ=69.71;MQ0=1;MQRankSum=0.064;QD=2.46;ReadPosRankSum=-1.968;VQSLOD=0.1333;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:47,2:55:2.16:0,2,458	1/1:3,7:11:13.15:88,13,0	0/1:24,1:20:10.80:11,0,39	0/0:20,0:14:18.11:0,18,95	0/1:30,0:31:4.27:4,0,287	0/0:18,0:19:15.03:0,15,165	0/0:21,4:26:3.32:0,3,268	1/1:21,15:38:20.91:244,21,0	0/0:16,0:19:40.51:0,41,234	0/0:20,0:20:9.60:0,10,155	0/0:16,1:20:18.47:0,18,198	0/0:22,1:23:12.66:0,13,175	0/1:14,1:15:6.71:7,0,100	0/1:26,0:26:39.38:39,0,179	0/0:19,1:20:7.49:0,7,203	0/0:23,1:24:33.05:0,33,333	1/1:10,23:34:25.40:322,25,0	0/1:7,10:17:7.84:89,0,8	0/0:14,1:19:5.05:0,5,122	0/1:16,5:23:40.03:40,0,106	0/1:17,1:18:25.67:26,0,104	0/1:24,1:26:0.69:1,0,254	0/1:17,0:18:14.37:14,0,63	0/0:23,0:25:28.55:0,29,286	0/0:14,0:14:22.05:0,22,135	0/1:25,5:30:47.58:48,0,189	0/0:22,1:24:5.71:0,6,251	0/0:11,0:11:14.39:0,14,87
chr10	63147394	.	AT	A	21496.26	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=4.996;DP=674;FS=15.031;HRun=1;HaplotypeScore=76.7801;InbreedingCoeff=0.9954;MQ=86.57;MQ0=0;MQRankSum=-6.603;QD=39.01;ReadPosRankSum=2.959;VQSLOD=3.9638;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:63,0:63:99:0,190,2992	1/1:0,6:6:14.88:203,15,0	0/0:17,0:17:51.11:0,51,725	0/0:25,0:26:59.60:0,60,880	0/0:17,0:17:51.16:0,51,787	1/1:0,30:30:78.26:1091,78,0	1/1:0,22:22:63.21:881,63,0	1/1:0,27:27:81.27:1132,81,0	1/1:0,29:29:78.26:1091,78,0	1/1:0,14:14:42.10:566,42,0	1/1:0,17:17:42.14:579,42,0	1/1:0,32:32:93.31:1301,93,0	1/1:0,27:27:72.24:1007,72,0	1/1:0,28:28:84.28:1175,84,0	1/1:0,21:21:60.20:840,60,0	1/1:0,22:22:63.21:881,63,0	1/1:0,27:27:72.24:1007,72,0	1/1:0,26:26:72.24:1007,72,0	1/1:0,18:18:54.17:737,54,0	1/1:0,19:19:57.19:797,57,0	1/1:0,43:43:99:1552,111,0	1/1:0,17:17:45.15:629,45,0	1/1:0,18:18:49.88:704,50,0	1/1:0,25:25:75.25:1049,75,0	1/1:0,17:17:39.13:545,39,0	1/1:0,25:25:75.25:1044,75,0	1/1:0,28:28:81.26:1133,81,0	1/1:0,13:13:39.13:545,39,0
chr10	63150220	.	GAA	G	7270.98	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=5.483;DP=506;FS=6.178;HRun=11;HaplotypeScore=73.7398;InbreedingCoeff=0.9888;MQ=82.94;MQ0=8;MQRankSum=-0.426;QD=26.93;ReadPosRankSum=3.351;VQSLOD=5.1012;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:66.22:0,66,995	0/0:8,0:8:24.08:0,24,370	0/0:52,0:31:58.23:0,58,657	0/0:53,0:26:39.31:0,39,394	0/0:22,0:24:65.69:0,66,938	1/1:4,13:17:39.08:410,39,0	1/1:3,8:11:21.04:224,21,0	0/0:19,0:19:48.15:0,48,719	0/0:10,0:10:26.45:0,26,378	1/1:0,22:22:66.17:702,66,0	1/1:3,16:19:48.11:511,48,0	1/1:0,12:13:30.03:375,30,0	1/1:0,7:7:18.05:192,18,0	1/1:1,10:11:30.07:319,30,0	1/1:0,9:9:21.05:224,21,0	1/1:3,15:17:39.10:415,39,0	0/0:24,0:24:63.20:0,63,943	0/0:19,0:21:56.12:0,56,774	1/1:3,13:16:36.04:375,36,0	1/1:0,19:19:57.14:607,57,0	1/1:1,7:8:21.05:224,21,0	1/1:1,5:5:15:147,15,0	1/1:3,14:17:39.09:415,39,0	1/1:0,5:5:12.03:128,12,0	1/1:0,12:12:36.09:383,36,0	1/1:1,16:17:48.11:504,48,0	1/1:3,21:24:63.15:670,63,0	1/1:4,15:19:42.04:447,42,0
chr10	63151456	.	ATCC	A	2997.68	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=10.188;DP=677;FS=1.632;HRun=0;HaplotypeScore=97.6143;InbreedingCoeff=0.9984;MQ=75.22;MQ0=0;MQRankSum=-1.475;QD=43.44;ReadPosRankSum=2.576;VQSLOD=5.1206;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,157,3575	0/0:17,0:17:51.18:0,51,1203	0/0:12,0:13:33.07:0,33,679	0/0:21,0:21:48.03:0,48,1072	0/0:32,0:32:96.33:0,96,2236	0/0:22,0:22:57.18:0,57,1291	0/0:23,0:23:66.23:0,66,1540	0/0:27,0:27:81.28:0,81,1901	0/0:23,0:23:69.24:0,69,1632	0/0:26,0:26:78.26:0,78,1787	0/0:22,0:22:66.23:0,66,1561	0/0:21,0:21:63.20:0,63,1444	0/0:16,0:16:48.16:0,48,1102	0/0:19,0:19:54.19:0,54,1232	0/0:27,0:27:78.25:0,78,1799	0/0:14,0:14:42.13:0,42,948	0/0:30,0:30:90.31:0,90,2104	0/0:25,0:25:69.17:0,69,1438	0/0:18,0:18:54.18:0,54,1223	0/0:33,0:33:99:0,99,2310	0/0:34,0:34:99:0,99,2341	1/1:0,28:28:72.20:1236,72,0	1/1:0,19:19:54.19:952,54,0	1/1:0,22:22:54.19:952,54,0	0/0:30,0:30:90.31:0,90,2105	0/0:25,0:25:75.26:0,75,1746	0/0:31,0:31:93.30:0,93,2121	0/0:7,0:7:21.07:0,21,497
chr10	63153274	.	GGTGTGT	G	415.93	PASS	AB=0.915;AC=14;AF=0.292;AN=48;BaseQRankSum=5.123;DP=549;FS=40.601;HRun=0;HaplotypeScore=110.4395;InbreedingCoeff=0.4923;MQ=67.93;MQ0=18;MQRankSum=-3.129;QD=2.75;ReadPosRankSum=0.933;VQSLOD=-0.4176;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:37.77:0,38,849	1/1:1,4:5:6.02:121,6,0	./.	./.	1/1:11,1:12:3.01:36,3,0	0/0:12,0:14:8.11:0,8,128	0/0:18,0:23:23.16:0,23,330	1/1:28,0:28:2.97:20,3,0	0/1:18,1:21:16.10:56,0,16	0/0:18,0:18:9.03:0,9,165	0/0:12,0:12:12.02:0,12,166	0/0:14,0:16:14.10:0,14,154	0/0:15,0:16:18.03:0,18,272	0/0:17,0:17:15.05:0,15,329	0/0:19,0:19:18.06:0,18,418	./.	1/1:17,4:21:10.28:184,10,0	0/0:17,0:17:1.77:0,2,4	0/0:21,0:22:3.01:0,3,38	0/0:12,0:14:1.67:0,2,109	0/0:25,0:25:8.99:0,9,74	1/1:11,2:13:5.58:80,6,0	./.	1/1:24,5:28:2.95:20,3,0	0/0:12,0:14:21.07:0,21,425	0/1:20,1:21:46.26:46,0,101	0/0:21,0:23:21.02:0,21,238	0/0:8,0:9:11.48:0,11,100
chr10	63154011	.	TCTTCCTTCCTTCTTTCCTTCCTTCCTTC	T	8645.57	PASS	AB=1.000;AC=37;AF=0.661;AN=56;BaseQRankSum=0.238;DP=450;FS=0.000;HRun=0;HaplotypeScore=288.3517;InbreedingCoeff=0.8831;MQ=72.12;MQ0=5;MQRankSum=-1.115;QD=32.02;ReadPosRankSum=4.746;VQSLOD=3.0136;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:75.02:0,75,3148	0/0:11,0:11:30.03:0,30,893	0/0:13,0:11:23.83:0,24,219	0/0:14,0:14:17.18:0,17,155	0/0:17,0:17:45.04:0,45,2183	1/1:15,0:14:30.04:520,30,0	1/1:18,0:17:17:386,17,0	0/0:27,0:24:45.02:0,45,457	0/0:18,0:18:30.01:0,30,476	1/1:12,0:12:30.06:468,30,0	1/1:11,9:20:32.46:265,32,0	1/1:17,0:17:35.88:313,36,0	1/1:13,0:12:14.95:330,15,0	1/1:15,0:14:27:832,27,0	1/1:17,0:17:42.09:1382,42,0	1/1:10,0:10:23.95:747,24,0	0/0:27,0:26:68.92:0,69,1921	0/0:20,0:20:54.01:0,54,2541	1/1:18,0:17:35.93:506,36,0	1/1:11,0:11:18.02:386,18,0	1/1:22,0:22:38.90:315,39,0	0/1:12,0:11:99:141,0,158	1/1:8,0:8:17.86:179,18,0	1/1:15,0:15:17.64:113,18,0	1/1:14,0:14:26.92:626,27,0	1/1:12,10:22:44.94:694,45,0	1/1:9,0:9:17.97:422,18,0	1/1:2,0:1:2.98:21,3,0
chr10	63154024	.	TTTCCTTCCTTCCTTCC	T	1381.22	PASS	AB=1.000;AC=25;AF=0.521;AN=48;BaseQRankSum=5.628;DP=377;FS=3.383;HRun=0;HaplotypeScore=175.5057;InbreedingCoeff=0.5094;MQ=62.89;MQ0=10;MQRankSum=-4.796;QD=8.53;ReadPosRankSum=4.620;VQSLOD=2.6642;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:29:42.61:0,43,1144	0/0:11,0:11:9.03:0,9,521	./.	./.	0/0:16,0:16:24.07:0,24,1064	1/1:11,0:10:3:27,3,0	1/1:18,0:14:1.82:5,2,0	0/0:22,0:18:3.01:0,3,38	1/1:9,9:18:6.02:260,6,0	1/1:10,0:10:2.50:9,2,0	0/0:19,0:19:2.74:0,3,15	1/1:14,0:13:3.01:59,3,0	0/0:8,0:7:0.91:0,1,2	1/1:12,0:11:12.01:221,12,0	1/1:15,0:15:20.08:329,20,0	1/1:8,0:8:9.03:247,9,0	0/0:24,0:24:21.07:0,21,966	0/0:21,0:21:36.09:0,36,1535	1/1:14,0:13:1.82:5,2,0	1/1:5,0:5:2.98:22,3,0	./.	0/0:10,0:9:3.01:0,3,87	0/0:7,0:7:0:0,0,0	0/0:9,0:9:0.89:0,1,2	1/1:12,0:12:7.27:167,7,0	0/1:19,0:19:68.72:69,0,83	1/1:6,0:6:6.02:112,6,0	./.
chr10	63154034	.	T	TTC	611.72	PASS	AC=6;AF=0.111;AN=54;BaseQRankSum=3.804;DP=329;FS=5.564;HRun=0;HaplotypeScore=79.1063;InbreedingCoeff=0.9101;MQ=56.41;MQ0=14;MQRankSum=-4.549;QD=33.98;ReadPosRankSum=0.211;VQSLOD=5.2714;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:73.37:0,73,979	0/0:8,0:8:24.08:0,24,391	0/0:5,0:4:12.04:0,12,195	0/0:5,0:5:11.63:0,12,147	0/0:18,0:18:54.17:0,54,851	0/0:10,0:9:24.08:0,24,390	0/0:14,0:10:24.06:0,24,360	0/0:23,0:16:45.12:0,45,690	0/0:18,0:18:27.01:0,27,379	0/0:10,0:9:27.08:0,27,413	0/0:17,0:17:23.91:0,24,358	0/0:12,0:11:33.10:0,33,512	0/0:7,0:6:12.04:0,12,197	0/0:12,0:11:27.09:0,27,433	0/0:15,0:15:39.13:0,39,633	0/0:6,0:6:15.05:0,15,244	0/0:18,0:17:51.12:0,51,773	0/0:21,0:21:63.21:0,63,1014	0/0:11,0:10:27.07:0,27,405	0/0:4,0:4:12.04:0,12,194	0/0:12,0:12:21.06:0,21,317	1/1:2,4:6:17.98:289,18,0	1/1:1,5:6:14.97:280,15,0	1/1:0,5:5:9.03:176,9,0	0/0:10,0:10:18.05:0,18,259	0/0:18,0:18:36.12:0,36,577	0/0:6,0:6:18.03:0,18,265	./.
chr10	63154041	.	T	TC	181.76	PASS	AB=0.750;AC=5;AF=0.089;AN=56;BaseQRankSum=4.566;DP=355;FS=4.506;HRun=2;HaplotypeScore=87.4317;InbreedingCoeff=0.6146;MQ=48.62;MQ0=16;MQRankSum=-3.618;QD=11.36;ReadPosRankSum=0.409;VQSLOD=1.9663;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:73.32:0,73,794	0/0:7,0:7:21.06:0,21,277	0/0:3,0:2:6.02:0,6,82	0/0:1,0:1:3.01:0,3,42	0/0:18,0:18:54.18:0,54,755	0/0:9,0:8:24.07:0,24,320	0/0:19,0:15:39.09:0,39,480	0/0:23,0:15:45.14:0,45,614	0/0:16,0:16:23.48:0,23,272	0/0:13,0:12:36.12:0,36,496	0/0:15,0:15:21.06:0,21,275	0/0:10,0:9:27.07:0,27,356	0/0:12,0:10:24.03:0,24,317	0/0:19,0:18:48.16:0,48,663	0/0:21,0:21:60.20:0,60,833	0/0:15,0:15:42.11:0,42,559	0/0:19,0:18:13.45:0,13,626	0/0:19,0:19:57.19:0,57,793	0/0:10,0:10:27.05:0,27,354	0/0:7,0:7:21.07:0,21,296	0/0:10,0:10:12:0,12,140	0/1:4,2:5:30:68,0,30	1/1:1,4:5:11.79:125,12,0	1/1:1,4:5:9.03:107,9,0	0/0:8,0:8:15:0,15,177	0/0:22,0:22:60.15:0,60,742	0/0:9,0:9:24.05:0,24,310	0/0:5,0:4:12.04:0,12,164
chr10	63154049	.	TTC	T	69.94	PASS	AC=4;AF=0.074;AN=54;BaseQRankSum=3.025;DP=321;FS=1.601;HRun=0;HaplotypeScore=82.6200;InbreedingCoeff=0.6059;MQ=47.82;MQ0=19;MQRankSum=-1.589;QD=17.49;ReadPosRankSum=3.395;VQSLOD=3.6301;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:54.53:0,55,749	0/0:5,0:5:15.05:0,15,271	./.	0/0:1,0:1:3.01:0,3,44	0/0:15,0:15:45.14:0,45,741	0/0:8,0:7:21.05:0,21,282	0/0:17,0:14:36.12:0,36,519	0/0:18,0:10:30.09:0,30,424	0/0:16,0:16:4.90:0,5,224	0/0:11,0:10:30.10:0,30,437	0/0:14,0:14:17.83:0,18,201	0/0:7,0:6:18.06:0,18,254	0/0:12,0:10:24.08:0,24,352	0/0:19,0:18:48.16:0,48,699	0/0:21,0:21:57.19:0,57,833	0/0:15,0:15:45.15:0,45,674	0/0:20,0:19:55.92:0,56,844	0/0:18,0:18:54.18:0,54,921	0/0:9,0:7:21.07:0,21,308	0/0:7,0:7:21.07:0,21,303	0/0:8,0:8:6.02:0,6,89	0/0:2,0:1:3.01:0,3,59	1/1:0,3:3:9.03:127,9,0	1/1:0,1:1:3.01:42,3,0	0/0:8,0:8:15.05:0,15,219	0/0:19,0:19:54.13:0,54,742	0/0:9,0:9:24.08:0,24,354	0/0:5,0:4:12.04:0,12,175
chr10	63154054	.	T	TTC	2124.78	PASS	AB=0.762;AC=16;AF=0.286;AN=56;BaseQRankSum=5.017;DP=311;FS=0.000;HRun=0;HaplotypeScore=72.9282;InbreedingCoeff=-0.2220;MQ=48.70;MQ0=20;MQRankSum=-1.012;QD=13.71;ReadPosRankSum=-0.594;VQSLOD=3.1868;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:69.03:0,69,923	0/0:6,0:6:18.05:0,18,268	0/0:4,0:2:3.01:0,3,41	0/0:3,0:2:3.01:0,3,49	0/0:13,0:13:39.13:0,39,631	0/1:4,3:6:30.42:207,0,30	0/1:12,4:13:84.36:84,0,406	0/0:19,0:11:31.91:0,32,468	0/0:15,0:15:20.93:0,21,256	0/1:8,3:10:99:134,0,287	0/0:10,0:10:6.02:0,6,98	0/0:3,0:2:5.59:0,6,35	0/1:6,4:9:99:158,0,174	0/1:9,5:16:99:264,0,394	0/1:10,10:20:99:489,0,380	0/1:10,4:14:99:201,0,445	0/0:18,0:17:31.01:0,31,678	0/0:18,0:18:51.16:0,51,807	0/1:8,3:8:99:158,0,168	0/1:6,3:9:99:151,0,262	0/0:5,4:10:11.96:0,12,142	0/0:2,0:1:3.01:0,3,49	1/1:3,0:3:3.84:10,4,0	1/1:1,0:1:1.25:3,1,0	0/1:3,6:9:99:161,0,128	0/1:17,0:17:99:158,0,516	0/1:7,2:9:98.10:98,0,264	0/0:5,0:4:12.04:0,12,195
chr10	63154061	.	T	TC	395.53	PASS	AB=0.811;AC=7;AF=0.125;AN=56;BaseQRankSum=7.117;DP=331;FS=7.265;HRun=2;HaplotypeScore=82.3598;InbreedingCoeff=-0.1763;MQ=51.49;MQ0=18;MQRankSum=-4.583;QD=5.01;ReadPosRankSum=-0.866;VQSLOD=-0.0344;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:49.84:0,50,734	0/0:5,0:5:15.05:0,15,208	0/0:7,0:3:4.26:0,4,44	0/0:8,0:3:3.01:0,3,42	0/0:13,0:13:36.12:0,36,503	0/1:3,1:3:26.72:27,0,36	0/0:17,0:14:38.68:0,39,522	0/0:25,0:19:47.17:0,47,599	0/0:14,0:14:17.43:0,17,167	0/0:10,0:9:23.48:0,23,332	0/0:12,0:12:12.03:0,12,152	0/0:3,0:2:4.24:0,4,28	0/0:8,0:6:12.04:0,12,168	0/1:11,4:14:99:103,0,337	0/1:13,6:19:99:182,0,409	0/1:12,3:15:75.20:75,0,437	0/0:18,0:17:41.10:0,41,580	0/0:19,0:19:57.15:0,57,767	0/0:11,0:8:20.51:0,21,290	0/1:9,1:10:16.25:16,0,267	0/0:8,0:8:21.07:0,21,292	0/0:7,0:7:18.06:0,18,239	0/0:10,0:10:14.67:0,15,135	0/0:7,0:7:5.51:0,6,50	0/1:4,2:6:69.60:70,0,108	0/0:17,0:17:11.44:0,11,472	0/1:8,2:10:50.87:51,0,266	0/0:5,0:5:15.05:0,15,209
chr10	63154110	.	T	TTCCA	4917.45	PASS	AB=1.000;AC=35;AF=0.625;AN=56;BaseQRankSum=5.194;DP=530;FS=1.459;HRun=0;HaplotypeScore=137.4235;InbreedingCoeff=0.6694;MQ=47.63;MQ0=35;MQRankSum=0.132;QD=16.18;ReadPosRankSum=3.374;VQSLOD=4.7833;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:33:69.21:0,69,1133	0/0:6,0:6:14.96:0,15,177	0/0:45,0:14:0.78:0,1,481	0/0:45,0:8:14.87:0,15,217	0/0:14,0:14:32.91:0,33,561	1/1:15,0:13:3.65:201,4,0	0/1:22,0:20:16.67:230,0,17	0/0:17,0:17:43.28:0,43,666	0/0:18,0:18:29.93:0,30,527	0/1:23,0:23:19.85:427,0,20	1/1:9,0:9:14.98:148,15,0	1/1:15,0:15:12.96:273,13,0	1/1:14,0:12:13.09:145,13,0	1/1:14,0:14:31.46:222,31,0	1/1:17,0:17:41.99:343,42,0	1/1:27,0:26:34.19:418,34,0	0/0:26,0:23:49.47:0,49,790	0/0:19,0:19:33.11:0,33,605	1/1:13,0:12:9.81:202,10,0	1/1:19,0:19:16.91:223,17,0	1/1:14,0:14:1.87:130,2,0	1/1:13,0:13:27.02:512,27,0	1/1:3,4:7:6.02:112,6,0	1/1:3,11:14:9.50:170,10,0	1/1:13,0:13:26.82:222,27,0	1/1:24,0:24:46.37:491,46,0	0/1:22,0:22:2.07:323,0,2	1/1:8,0:7:17.53:125,18,0
chr10	63154111	.	T	TTC	693.93	PASS	AB=0.953;AC=34;AF=0.654;AN=52;BaseQRankSum=1.054;DP=556;FS=0.000;HRun=0;HaplotypeScore=151.8616;InbreedingCoeff=0.1317;MQ=45.71;MQ0=35;MQRankSum=-1.343;QD=1.85;ReadPosRankSum=-0.346;VQSLOD=2.2893;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:37,0:34:16.74:17,0,98	1/1:6,0:6:3.01:34,3,0	./.	./.	0/0:15,0:15:2.47:0,2,10	1/1:15,0:14:6.42:64,6,0	0/0:21,0:19:2.84:0,3,14	1/1:18,0:18:0.89:2,1,0	0/1:18,0:18:8.57:9,0,12	1/1:24,0:24:9.05:55,9,0	1/1:8,0:8:2.98:21,3,0	1/1:14,0:15:4.97:62,5,0	0/0:16,0:14:0.10:0,0,0	0/1:14,0:14:19.48:19,0,25	1/1:18,0:19:6:60,6,0	0/0:28,0:27:3.86:0,4,11	0/1:23,5:25:8.67:78,0,9	0/1:15,5:21:21.46:54,0,21	1/1:14,0:14:3.01:32,3,0	1/1:19,0:19:2.50:10,2,0	1/1:13,0:14:5.46:29,5,0	0/1:19,0:19:0:0,0,0	0/1:8,0:7:0:0,0,0	1/1:15,0:15:3:25,3,0	0/0:15,0:15:0.31:0,0,0	1/1:25,0:27:20.56:156,21,0	1/1:25,0:25:12.10:88,12,0	0/1:10,0:9:0:1,0,0
chr10	63154161	.	CTT	C	4583.66	PASS	AB=1.000;AC=37;AF=0.661;AN=56;BaseQRankSum=-5.694;DP=473;FS=0.964;HRun=3;HaplotypeScore=89.9784;InbreedingCoeff=0.7670;MQ=57.74;MQ0=24;MQRankSum=3.202;QD=14.02;ReadPosRankSum=5.286;VQSLOD=1.8373;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:32:42.93:0,43,599	0/0:2,0:2:5.96:0,6,46	0/0:13,0:9:6.92:0,7,96	0/0:14,0:9:3.45:0,3,68	0/0:18,0:17:37.80:0,38,301	1/1:20,1:18:31.11:275,31,0	1/1:23,1:22:8.31:232,8,0	0/0:17,0:13:33:0,33,300	1/1:17,0:17:17.16:235,17,0	1/1:21,0:20:24.26:395,24,0	1/1:8,0:6:13.19:117,13,0	1/1:24,0:24:52.68:448,53,0	1/1:6,11:15:0.29:41,0,0	1/1:21,0:21:11.75:304,12,0	1/1:17,0:17:31.11:250,31,0	0/1:15,0:13:4.73:38,0,5	0/0:22,0:20:46.81:0,47,377	0/0:15,0:15:23.99:0,24,211	1/1:13,0:12:3.91:208,4,0	1/1:15,0:15:27.91:230,28,0	1/1:17,0:15:25.83:200,26,0	0/0:5,6:11:2.19:0,2,5	1/1:17,0:16:37.61:321,38,0	1/1:22,0:22:30.77:254,31,0	1/1:14,0:14:28.22:243,28,0	1/1:22,0:21:54.74:479,55,0	1/1:14,1:15:29.65:241,30,0	1/1:7,0:5:9.40:74,9,0
chr10	63156375	.	T	TCACACACACA	3057.22	PASS	AB=0.963;AC=35;AF=0.700;AN=50;BaseQRankSum=-0.543;DP=481;FS=0.741;HRun=0;HaplotypeScore=148.0584;InbreedingCoeff=0.3574;MQ=65.50;MQ0=13;MQRankSum=-5.945;QD=10.43;ReadPosRankSum=-3.988;VQSLOD=1.3855;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:39:30.04:0,30,1196	0/1:2,0:2:29.65:30,0,34	./.	./.	0/0:19,0:21:30.02:0,30,696	1/1:16,0:20:3.01:89,3,0	1/1:26,5:34:8.48:303,8,0	0/1:35,0:35:99:135,0,201	0/0:9,0:12:12.02:0,12,233	1/1:16,0:15:15.03:264,15,0	1/1:4,0:4:2.99:23,3,0	1/1:14,4:21:6.02:238,6,0	1/1:13,0:11:9.03:298,9,0	./.	1/1:12,0:16:2.98:90,3,0	1/1:8,2:10:6.02:269,6,0	0/0:10,0:27:36.08:0,36,455	0/1:14,0:16:99:110,0,127	1/1:13,2:16:17.47:387,17,0	1/1:5,1:5:3.01:118,3,0	1/1:34,0:32:3.46:25,3,0	1/1:7,0:7:3.01:90,3,0	1/1:10,0:8:3.01:49,3,0	0/0:20,0:22:0.41:0,0,1	0/0:12,2:15:1.41:0,1,2	1/1:12,0:12:15.04:266,15,0	1/1:5,0:6:6.02:239,6,0	1/1:14,0:10:6.02:188,6,0
chr10	63156488	.	C	CT	4803.45	PASS	AB=0.601;AC=28;AF=0.500;AN=56;BaseQRankSum=-6.980;DP=471;FS=5.875;HRun=11;HaplotypeScore=60.8837;InbreedingCoeff=0.6484;MQ=68.44;MQ0=0;MQRankSum=-2.111;QD=18.19;ReadPosRankSum=-0.070;VQSLOD=5.8329;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:74.65:0,75,580	0/0:5,0:5:8.95:0,9,70	0/0:10,0:7:14.94:0,15,114	0/0:13,0:14:6.97:0,7,89	0/0:30,0:30:59.70:0,60,462	1/1:1,20:21:45.05:447,45,0	1/1:3,11:14:24.05:244,24,0	0/0:35,0:35:54.10:0,54,535	0/0:10,0:9:17.90:0,18,139	1/1:8,8:16:3.82:220,4,0	0/1:3,9:12:5.17:134,0,5	1/1:7,9:16:30.04:296,30,0	1/1:3,13:17:29.37:328,29,0	1/1:5,8:13:21.04:213,21,0	0/1:4,11:15:13.85:214,0,14	1/1:0,13:15:41.75:394,42,0	0/0:17,1:19:19.41:0,19,324	0/0:23,0:23:50.77:0,51,395	1/1:4,15:18:45.07:447,45,0	1/1:4,12:16:30.06:304,30,0	0/1:7,5:12:42.93:43,0,75	0/0:1,0:12:22.40:0,22,65	0/0:1,0:9:12.22:0,12,36	0/0:3,0:9:10.17:0,10,29	1/1:2,17:19:43.33:429,43,0	1/1:6,13:20:1.43:355,1,0	0/1:3,13:16:16.83:186,0,17	1/1:4,19:23:54.11:548,54,0
chr10	63156692	.	AAACAAC	A	4096.66	PASS	AB=0.524;AC=29;AF=0.537;AN=54;BaseQRankSum=0.071;DP=479;FS=48.623;HRun=0;HaplotypeScore=106.8787;InbreedingCoeff=0.8034;MQ=63.81;MQ0=3;MQRankSum=-7.285;QD=22.39;ReadPosRankSum=1.332;VQSLOD=1.3237;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,114,3368	0/0:13,0:13:39.13:0,39,900	0/0:39,0:25:60.20:0,60,1065	0/0:37,0:24:42.26:0,42,770	0/0:23,0:23:57.19:0,57,1687	1/1:1,5:6:9.03:198,9,0	1/1:4,8:12:3.01:66,3,0	0/0:24,0:24:51.17:0,51,1230	0/0:15,0:15:36.11:0,36,925	1/1:10,0:10:14.69:209,15,0	./.	1/1:0,10:10:9.03:198,9,0	1/1:2,8:10:9.03:198,9,0	1/1:0,8:8:12.04:264,12,0	1/1:4,7:11:15.05:318,15,0	0/1:1,10:11:84:186,0,84	0/0:21,0:21:48.16:0,48,1322	0/0:12,0:12:30.10:0,30,826	1/1:6,16:21:42.13:760,42,0	1/1:2,4:6:6.02:107,6,0	1/1:6,11:17:3.01:66,3,0	0/0:17,0:17:42.14:0,42,1122	0/0:15,0:15:42.14:0,42,1090	0/0:27,0:27:66.23:0,66,1851	1/1:2,15:17:18.06:384,18,0	1/1:3,17:20:48.13:811,48,0	1/1:4,7:11:8.86:198,9,0	1/1:1,11:12:6.02:132,6,0
chr10	63156753	.	C	CAG	6064.04	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=0.266;DP=443;FS=24.795;HRun=0;HaplotypeScore=90.6955;InbreedingCoeff=0.9652;MQ=93.77;MQ0=0;MQRankSum=-0.665;QD=52.28;ReadPosRankSum=-0.169;VQSLOD=3.4708;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:71.26:0,71,1038	1/1:0,12:12:36.12:694,36,0	0/0:18,0:18:50.32:0,50,684	0/0:36,0:36:89.73:0,90,1247	0/0:20,0:20:54.18:0,54,826	0/0:10,0:10:21.07:0,21,321	0/0:23,0:23:51.17:0,51,771	1/1:2,20:23:63.20:1179,63,0	1/1:2,13:15:38.92:708,39,0	0/0:15,0:15:42.13:0,42,620	0/0:12,0:12:18.06:0,18,275	0/0:12,0:12:15.05:0,15,229	0/0:18,0:18:39.13:0,39,596	0/0:10,0:10:15.05:0,15,229	0/0:15,0:15:33.11:0,33,496	0/0:16,0:16:24.55:0,25,368	1/1:0,7:7:18.06:347,18,0	1/1:0,8:8:24.08:463,24,0	0/0:15,0:15:45.15:0,45,689	0/0:6,0:6:9.03:0,9,138	0/0:6,0:6:12.04:0,12,184	1/1:1,20:21:56.98:1054,57,0	1/1:0,18:18:54.19:1040,54,0	1/1:1,11:12:30.10:579,30,0	0/0:20,0:20:24.08:0,24,367	0/0:23,0:23:63.21:0,63,965	0/0:12,0:12:20.25:0,20,320	0/0:12,0:12:9.03:0,9,138
chr10	63157407	.	G	GAC	3196.51	PASS	AB=0.821;AC=26;AF=0.520;AN=50;BaseQRankSum=-3.214;DP=483;FS=7.375;HRun=0;HaplotypeScore=155.3033;InbreedingCoeff=0.0388;MQ=39.91;MQ0=6;MQRankSum=-0.053;QD=8.81;ReadPosRankSum=-0.637;VQSLOD=2.8160;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:24:11.37:11,0,90	0/0:0,0:4:2.16:0,2,13	./.	0/0:25,0:8:9.26:0,9,85	0/1:19,0:22:0.39:1,0,0	1/1:8,9:18:12.01:164,12,0	1/1:8,6:15:6.02:92,6,0	0/0:16,0:21:10.47:0,10,52	0/0:18,0:18:30.01:0,30,339	0/1:25,1:34:5.46:317,0,5	0/1:3,2:14:0.08:0,0,0	0/1:12,11:23:3.34:343,0,3	0/1:11,4:16:40.75:270,0,41	0/1:7,8:16:24.45:80,0,24	0/1:14,16:32:15.84:204,0,16	1/1:12,9:21:18.04:253,18,0	0/0:9,0:11:6.31:0,6,37	0/1:4,0:5:1.65:2,0,7	0/1:11,3:14:77.78:137,0,78	1/1:4,4:7:6.02:92,6,0	0/1:24,6:28:93.67:374,0,94	0/1:8,0:13:0:0,0,0	./.	./.	1/1:5,10:15:18.06:275,18,0	1/1:12,11:23:42.04:602,42,0	0/1:9,4:14:76.94:81,0,77	0/1:3,0:4:5.50:48,0,5
chr10	63157429	.	C	CAGTGTATAG	625.24	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=7.514;DP=655;FS=10.278;HRun=0;HaplotypeScore=295.0854;InbreedingCoeff=0.0256;MQ=43.00;MQ0=25;MQRankSum=-6.066;QD=5.12;ReadPosRankSum=-4.327;VQSLOD=0.5725;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:26.60:0,27,695	0/1:6,0:6:46.35:46,0,164	0/1:63,0:9:12.14:12,0,198	0/0:63,0:10:17.29:0,17,489	0/0:22,0:22:0.84:0,1,92	0/0:23,0:22:8.86:0,9,503	0/0:21,0:21:28.25:0,28,799	0/1:24,0:24:99:285,0,273	0/0:20,0:20:35.78:0,36,1130	0/0:32,0:31:35.97:0,36,1190	0/0:18,0:18:0.31:0,0,202	0/0:26,0:26:45.06:0,45,988	0/0:17,0:17:25.55:0,26,848	0/0:23,0:23:36.22:0,36,820	0/0:31,0:31:22:0,22,734	0/0:27,0:27:41.87:0,42,885	0/1:10,0:10:99:303,0,250	0/1:5,0:5:76.62:77,0,154	0/0:19,0:19:52.32:0,52,1210	0/0:12,0:11:20.73:0,21,579	0/0:45,0:43:89.97:0,90,2245	1/1:14,0:14:3.37:27,3,0	0/0:5,0:5:2.30:0,2,79	0/0:12,4:16:12.17:0,12,322	0/0:16,0:16:23.74:0,24,459	0/0:33,0:32:55.90:0,56,1536	0/0:26,0:26:35.64:0,36,1274	0/0:7,0:7:18.06:0,18,498
chr10	63157463	.	G	GAC	727.40	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=5.144;DP=753;FS=7.790;HRun=0;HaplotypeScore=176.3031;InbreedingCoeff=0.7708;MQ=52.32;MQ0=10;MQRankSum=1.784;QD=7.35;ReadPosRankSum=-0.977;VQSLOD=2.6903;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:54.13:0,54,684	0/0:6,0:6:6.01:0,6,76	0/1:44,0:21:33.91:34,0,167	0/0:47,0:10:10.93:0,11,153	0/0:24,0:24:26.73:0,27,343	0/0:22,0:22:39.10:0,39,496	0/0:24,0:24:44.88:0,45,550	0/0:42,0:42:87.25:0,87,1062	0/0:19,0:19:24.08:0,24,298	0/0:21,0:21:45.14:0,45,571	0/0:21,0:21:27.09:0,27,340	0/0:35,0:35:54.06:0,54,661	0/0:29,0:29:66.21:0,66,835	0/0:29,0:29:53.98:0,54,687	0/0:42,0:42:39.10:0,39,496	0/0:30,0:30:69.22:0,69,868	0/0:18,0:18:38.39:0,38,436	0/0:13,0:13:30.98:0,31,382	0/0:20,0:20:51.12:0,51,615	0/0:19,0:19:51.15:0,51,633	0/0:64,0:64:99:0,156,1967	1/1:6,10:16:9.02:114,9,0	1/1:3,8:11:15:220,15,0	1/1:4,21:26:30.10:502,30,0	0/0:20,0:20:33:0,33,396	0/0:32,0:32:81.10:0,81,973	0/0:30,0:30:66.11:0,66,838	0/0:11,0:11:30.10:0,30,380
chr10	63157516	.	G	GACAC	186.61	PASS	AB=0.750;AC=1;AF=0.018;AN=56;BaseQRankSum=6.107;DP=815;FS=3.740;HRun=0;HaplotypeScore=177.0361;InbreedingCoeff=0.0738;MQ=55.66;MQ0=5;MQRankSum=-4.360;QD=7.78;ReadPosRankSum=-4.256;VQSLOD=1.5048;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:60.68:0,61,1079	0/0:4,0:4:9.03:0,9,162	0/0:24,0:16:26.03:0,26,366	0/0:25,0:14:12:0,12,167	0/0:23,0:23:35.45:0,35,569	0/0:28,0:28:38.91:0,39,664	0/0:32,0:32:80.86:0,81,1455	0/0:49,0:45:99:0,117,2095	0/1:16,8:24:10.62:261,0,11	0/0:26,0:26:72.25:0,72,1294	0/0:13,0:13:7.15:0,7,159	0/0:36,0:36:66.23:0,66,1181	0/0:36,0:36:72.22:0,72,1289	0/0:36,0:36:75.16:0,75,1200	0/0:35,0:35:48.07:0,48,862	0/0:38,0:38:60.02:0,60,1012	0/0:27,0:27:7.52:0,8,678	0/0:26,0:27:65.99:0,66,1102	0/0:16,0:16:36.11:0,36,606	0/0:21,0:21:54.18:0,54,970	0/0:90,0:91:99:0,214,3760	0/0:18,0:18:17:0,17,286	0/0:16,0:16:36.07:0,36,597	0/0:38,0:38:54.15:0,54,910	0/0:12,0:12:21.07:0,21,377	0/0:30,0:30:81.27:0,81,1415	0/0:30,0:30:53.62:0,54,969	0/0:19,0:19:54.18:0,54,962
chr10	63157531	.	GAC	G	151.73	PASS	AB=0.731;AC=1;AF=0.018;AN=56;BaseQRankSum=5.097;DP=825;FS=10.122;HRun=0;HaplotypeScore=146.9833;InbreedingCoeff=-0.0257;MQ=55.22;MQ0=7;MQRankSum=-1.428;QD=3.99;ReadPosRankSum=-2.525;VQSLOD=2.0036;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:78.18:0,78,1224	0/0:5,0:5:15.05:0,15,254	0/0:25,0:17:29.90:0,30,407	0/0:21,0:12:6.59:0,7,85	0/0:23,0:23:36.03:0,36,533	0/0:27,0:27:30.07:0,30,456	0/0:31,0:31:74.72:0,75,1184	0/0:50,0:46:99:0,114,1787	0/1:24,14:35:99:226,0,348	0/0:29,0:29:75.20:0,75,1179	0/0:13,0:13:9:0,9,121	0/0:32,0:32:60.18:0,60,983	0/0:32,0:32:63.13:0,63,1003	0/0:33,0:33:17.88:0,18,740	0/0:34,0:34:39:0,39,619	0/0:34,0:34:60.38:0,60,952	0/0:27,0:28:37.72:0,38,737	0/0:26,0:26:60.16:0,60,1019	0/0:18,0:17:51.05:0,51,754	0/0:18,0:18:51.17:0,51,866	0/0:93,0:93:99:0,232,3750	0/0:14,0:14:12.03:0,12,190	0/0:20,0:20:45.02:0,45,697	0/0:36,0:36:60.18:0,60,979	0/0:12,0:12:27.09:0,27,445	0/0:33,0:33:87.29:0,87,1437	0/0:29,0:29:54.02:0,54,886	0/0:22,0:22:63.21:0,63,1037
chr10	63157641	.	G	GAC	1647.16	PASS	AB=0.797;AC=6;AF=0.107;AN=56;BaseQRankSum=1.650;DP=783;FS=16.085;HRun=0;HaplotypeScore=164.2094;InbreedingCoeff=0.2806;MQ=54.04;MQ0=5;MQRankSum=-0.190;QD=12.77;ReadPosRankSum=-3.984;VQSLOD=1.8455;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:96.29:0,96,1205	1/1:9,2:11:2.98:22,3,0	0/0:39,0:15:17.88:0,18,360	0/0:27,0:12:24.07:0,24,288	0/0:22,0:22:18.06:0,18,229	0/0:24,0:24:48.05:0,48,610	0/0:22,0:22:48.15:0,48,610	0/1:39,22:54:99:1147,0,199	0/0:29,0:33:29.65:0,30,293	0/0:34,0:34:78.20:0,78,962	0/0:12,0:12:15.05:0,15,191	0/0:33,0:33:78.25:0,78,992	0/0:26,0:26:72.20:0,72,890	0/0:27,0:27:66.19:0,66,824	0/0:33,0:33:78.22:0,78,963	0/0:26,0:26:57.16:0,57,698	0/1:10,16:26:17.05:416,0,17	0/1:12,3:15:32.67:173,0,33	0/0:21,0:21:54.11:0,54,622	0/0:23,0:23:57.10:0,57,685	0/0:59,0:59:99:0,138,1743	0/1:16,0:16:0:1,0,0	0/0:12,0:12:17.98:0,18,229	0/0:23,0:23:60.15:0,60,733	0/0:21,0:21:51.10:0,51,615	0/0:40,0:40:99:0,102,1213	0/0:37,0:36:93.28:0,93,1168	0/0:17,0:17:42.11:0,42,519
chr10	63157706	.	T	TA	18445.92	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-7.479;DP=560;FS=19.811;HRun=2;HaplotypeScore=79.4634;InbreedingCoeff=0.9923;MQ=78.91;MQ0=0;MQRankSum=-3.305;QD=38.35;ReadPosRankSum=2.549;VQSLOD=3.0234;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:69.16:0,69,813	1/1:0,13:13:33.11:473,33,0	0/0:18,0:19:38.22:0,38,480	0/0:14,0:14:28.10:0,28,364	0/0:22,0:22:57.01:0,57,663	1/1:0,22:21:57.19:820,57,0	1/1:1,11:12:27.09:389,27,0	1/1:2,51:53:99:2127,153,0	1/1:3,17:20:54.17:757,54,0	1/1:0,28:28:84.27:1190,84,0	1/1:1,18:19:51.12:708,51,0	1/1:2,14:16:39.13:562,39,0	1/1:1,11:12:30.10:432,30,0	1/1:2,16:18:48.16:690,48,0	1/1:1,16:17:42.14:605,42,0	1/1:2,21:23:57.19:821,57,0	1/1:3,17:20:48.16:687,48,0	1/1:1,14:15:45.13:627,45,0	1/1:0,26:26:78.25:1103,78,0	1/1:1,23:24:69.17:954,69,0	1/1:1,20:21:54.18:777,54,0	1/1:0,11:11:27.09:388,27,0	1/1:0,5:5:15.05:215,15,0	1/1:0,6:6:18.06:259,18,0	1/1:0,21:21:51.17:733,51,0	1/1:1,32:33:99:1401,99,0	1/1:2,26:27:66.22:950,66,0	1/1:0,18:18:54.18:777,54,0
chr10	63158734	.	AT	A	3731.63	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=11.384;DP=656;FS=12.491;HRun=10;HaplotypeScore=64.4016;InbreedingCoeff=0.8961;MQ=67.39;MQ0=1;MQRankSum=-0.134;QD=19.74;ReadPosRankSum=0.344;VQSLOD=3.6725;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,1:51:99:0,112,1428	1/1:2,10:12:26.99:234,27,0	0/1:12,0:9:12.98:13,0,65	0/0:12,0:10:4.18:0,4,114	0/0:26,0:27:66.32:0,66,758	0/0:19,0:19:48.13:0,48,531	0/0:22,0:22:57.10:0,57,609	1/1:12,22:34:65.93:565,66,0	1/1:1,29:30:71.98:625,72,0	0/0:27,1:28:49.12:0,49,748	0/0:20,1:21:34.10:0,34,598	0/0:20,0:20:54.15:0,54,597	0/0:20,0:21:50.93:0,51,519	0/0:23,0:23:60.16:0,60,664	0/0:36,1:38:78.88:0,79,1052	0/0:16,0:17:47.96:0,48,512	1/1:2,21:23:59.98:521,60,0	1/1:2,16:18:47.99:417,48,0	0/0:25,0:25:57.14:0,57,616	0/0:26,0:28:65.94:0,66,676	0/0:26,0:27:74.83:0,75,791	1/1:1,16:17:47.99:417,48,0	1/1:2,15:17:23.76:366,24,0	1/1:1,25:26:65.98:573,66,0	0/0:27,0:27:69.17:0,69,755	0/0:17,0:17:51.14:0,51,564	0/0:32,0:32:84.06:0,84,891	0/0:12,0:12:24.03:0,24,247
chr10	63159133	.	G	GGT	13075.39	PASS	AB=0.682;AC=27;AF=0.482;AN=56;BaseQRankSum=-16.137;DP=817;FS=5.278;HRun=0;HaplotypeScore=87.1088;InbreedingCoeff=0.5001;MQ=70.49;MQ0=8;MQRankSum=0.645;QD=26.79;ReadPosRankSum=2.166;VQSLOD=6.0854;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,114,1304	0/0:11,0:11:18.11:0,18,310	0/0:45,0:19:8.92:0,9,80	0/1:34,0:24:8.74:9,0,89	0/0:26,0:26:63.18:0,63,742	1/1:2,16:18:39.13:621,39,0	1/1:9,14:23:4.85:582,5,0	0/0:37,0:37:68.30:0,68,773	0/0:35,0:35:87.26:0,87,1028	1/1:10,20:30:30.43:911,30,0	0/1:7,10:18:2.19:444,0,2	1/1:7,23:30:39.47:1073,39,0	1/1:6,20:25:54.18:839,54,0	0/1:9,20:29:38.06:885,0,38	1/1:7,24:31:63.21:989,63,0	0/1:7,18:25:42.26:752,0,42	0/0:24,0:25:57.01:0,57,658	0/0:23,0:27:62.47:0,62,664	0/1:23,6:29:99:201,0,146	1/1:6,19:25:24.43:855,24,0	1/1:23,42:65:16.11:1708,16,0	0/0:21,0:21:42.12:0,42,489	0/0:21,0:22:54:0,54,622	0/0:26,0:28:54.91:0,55,779	0/1:8,20:28:47.10:752,0,47	0/1:10,25:35:23.05:1082,0,23	1/1:6,19:26:10.29:808,10,0	1/1:3,11:14:36.12:565,36,0
chr10	63159881	.	CT	C	8657.12	PASS	AB=0.545;AC=47;AF=0.839;AN=56;BaseQRankSum=3.384;DP=542;FS=0.000;HRun=11;HaplotypeScore=59.3632;InbreedingCoeff=0.8658;MQ=72.76;MQ0=2;MQRankSum=-1.846;QD=19.28;ReadPosRankSum=2.145;VQSLOD=5.8374;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,3:32:63.32:0,63,825	1/1:2,8:11:23:178,23,0	0/0:19,0:12:22.32:0,22,176	0/0:16,0:10:6.69:0,7,72	0/0:24,1:26:47.25:0,47,657	1/1:1,15:16:44.95:369,45,0	1/1:5,16:22:52.97:424,53,0	1/1:7,17:24:24.97:347,25,0	1/1:1,17:18:50.94:419,51,0	1/1:4,22:26:65.84:532,66,0	1/1:2,12:15:34.99:277,35,0	1/1:5,13:18:22.09:279,22,0	1/1:2,11:14:29.95:246,30,0	1/1:3,17:20:47.94:394,48,0	1/1:1,7:8:20.97:172,21,0	1/1:1,8:9:23.97:197,24,0	1/1:1,27:28:71.92:591,72,0	1/1:3,10:13:32.96:271,33,0	0/1:4,19:24:5.10:355,0,5	1/1:6,19:25:56.87:462,57,0	1/1:1,10:11:26.97:222,27,0	1/1:9,9:18:29.92:245,30,0	1/1:6,10:17:37.95:301,38,0	1/1:6,22:28:68.65:585,69,0	1/1:1,18:19:50.94:419,51,0	1/1:5,33:38:66.88:756,67,0	1/1:1,13:14:38.95:320,39,0	1/1:1,12:13:35.96:296,36,0
chr10	63159956	.	AAAAG	A	2291.32	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=13.767;DP=543;FS=2.944;HRun=0;HaplotypeScore=110.4966;InbreedingCoeff=0.9512;MQ=71.82;MQ0=0;MQRankSum=-2.371;QD=14.06;ReadPosRankSum=-1.203;VQSLOD=3.1485;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:87.25:0,87,1874	1/1:9,0:9:20.86:152,21,0	0/0:20,0:14:27.18:0,27,414	0/0:11,0:9:9.68:0,10,121	0/0:25,0:25:72.19:0,72,1437	0/0:22,0:22:66.19:0,66,1408	0/0:14,0:14:42.09:0,42,826	1/1:23,2:25:58.63:492,59,0	1/1:19,0:19:1.06:47,1,0	0/0:26,0:26:78.24:0,78,1606	0/0:12,0:12:33.11:0,33,767	0/0:18,0:18:50.83:0,51,1113	0/0:15,0:15:35.09:0,35,699	0/0:21,0:21:60.18:0,60,1322	0/0:12,0:12:30.07:0,30,646	0/0:16,0:16:48.15:0,48,1094	1/1:22,0:22:65.55:477,66,0	1/1:24,0:24:35.83:278,36,0	0/0:22,0:22:57.14:0,57,1077	0/0:25,0:25:69.20:0,69,1532	0/0:12,0:12:33.09:0,33,733	1/1:19,1:20:47.50:400,48,0	1/1:21,0:21:30.20:246,30,0	1/1:22,1:23:51.86:400,52,0	0/0:14,0:14:39.13:0,39,908	0/0:20,0:20:57.10:0,57,1176	0/0:27,0:26:81.23:0,81,1751	0/0:16,0:16:48.16:0,48,1066
chr10	63159957	.	AAAG	A	5167.09	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=9.918;DP=545;FS=2.781;HRun=0;HaplotypeScore=90.9035;InbreedingCoeff=0.9742;MQ=71.03;MQ0=0;MQRankSum=-2.104;QD=31.32;ReadPosRankSum=-2.246;VQSLOD=4.7790;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:87.23:0,87,1549	1/1:3,6:9:21.01:298,21,0	0/0:20,0:14:26.37:0,26,361	0/0:10,0:8:4:0,4,118	0/0:26,0:26:75.15:0,75,1204	0/0:22,0:22:66.17:0,66,1135	0/0:14,0:14:42.09:0,42,697	1/1:5,20:25:66.08:811,66,0	1/1:19,0:19:50.95:315,51,0	0/0:27,0:27:66.26:0,66,1322	0/0:12,0:12:36.07:0,36,652	0/0:18,0:18:50.83:0,51,926	0/0:15,0:15:34.58:0,35,583	0/0:21,0:21:60.15:0,60,1079	0/0:12,0:12:30.06:0,30,537	0/0:16,0:16:48.15:0,48,910	1/1:8,16:24:72.09:1057,72,0	1/1:0,24:24:36.12:610,36,0	0/0:22,0:22:57.11:0,57,886	0/0:25,0:25:69.20:0,69,1258	0/0:12,0:12:33.09:0,33,604	1/1:4,16:20:53.94:691,54,0	1/1:3,18:21:39.97:574,40,0	1/1:2,21:23:54.01:811,54,0	0/0:13,0:13:39.12:0,39,743	0/0:20,0:20:56.38:0,56,974	0/0:27,0:26:81.21:0,81,1444	0/0:16,0:16:48.14:0,48,858
chr10	63159958	.	AAG	A	3975.38	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=12.228;DP=540;FS=5.912;HRun=0;HaplotypeScore=83.9925;InbreedingCoeff=0.9670;MQ=68.63;MQ0=0;MQRankSum=-2.207;QD=24.24;ReadPosRankSum=-2.819;VQSLOD=3.2854;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:87.22:0,87,1243	1/1:10,0:10:23.99:220,24,0	0/0:19,0:13:21.12:0,21,270	0/0:10,0:7:2.39:0,2,92	0/0:25,0:25:74.75:0,75,954	0/0:22,0:22:65.87:0,66,875	0/0:14,0:14:42.09:0,42,573	1/1:23,1:24:66.04:626,66,0	1/1:8,11:19:55.55:694,56,0	0/0:27,0:27:65.94:0,66,1048	0/0:12,0:12:36.05:0,36,512	0/0:18,0:18:50.83:0,51,735	0/0:14,0:14:33.02:0,33,464	0/0:21,0:21:59.75:0,60,851	0/0:12,0:12:29.99:0,30,425	0/0:16,0:16:48.15:0,48,727	1/1:24,0:24:72:682,72,0	1/1:24,0:24:36.07:369,36,0	0/0:21,0:21:56.91:0,57,727	0/0:25,0:25:69.16:0,69,989	0/0:12,0:12:33.09:0,33,481	1/1:20,0:20:53.90:495,54,0	1/1:19,1:20:39.62:372,40,0	1/1:23,0:23:53.95:518,54,0	0/0:13,0:13:38.92:0,39,585	0/0:20,0:20:47.70:0,48,778	0/0:27,0:26:81.21:0,81,1161	0/0:17,0:17:26.26:0,26,644
chr10	63160907	.	AGT	A	642.14	PASS	AB=0.891;AC=38;AF=0.864;AN=44;BaseQRankSum=0.595;DP=498;FS=0.000;HRun=0;HaplotypeScore=68.9617;InbreedingCoeff=-0.0236;MQ=68.37;MQ0=16;MQRankSum=0.785;QD=1.63;ReadPosRankSum=0.499;VQSLOD=0.6984;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:34,0:35:6.15:29,6,0	./.	./.	0/0:23,0:20:0:0,0,0	./.	0/1:10,0:12:8.15:8,0,17	1/1:31,0:32:4.96:85,5,0	./.	1/1:8,0:10:2.80:13,3,0	1/1:17,2:18:5.97:52,6,0	1/1:8,4:12:3.01:32,3,0	1/1:13,0:13:5.84:40,6,0	1/1:14,0:14:5.98:53,6,0	1/1:17,1:18:2.74:32,3,0	1/1:12,4:15:3.01:32,3,0	1/1:10,0:10:5.37:33,5,0	1/1:20,0:25:2.84:14,3,0	0/1:11,0:12:7.81:8,0,8	./.	1/1:12,1:12:3.01:32,3,0	0/1:39,6:45:15.84:55,0,16	1/1:12,0:15:5.68:28,6,0	./.	0/1:25,0:28:0.13:0,0,0	1/1:15,0:14:2.84:14,3,0	1/1:19,0:18:3:26,3,0	1/1:8,2:9:3.01:32,3,0	1/1:18,0:17:14.96:120,15,0
chr10	63161313	.	CGGTATATGA	C	211.49	PASS	AB=0.692;AC=1;AF=0.018;AN=56;BaseQRankSum=3.330;DP=517;FS=23.961;HRun=0;HaplotypeScore=156.6180;InbreedingCoeff=-0.0202;MQ=75.16;MQ0=4;MQRankSum=2.978;QD=11.75;ReadPosRankSum=-4.210;VQSLOD=-0.2176;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:93.23:0,93,3936	0/0:9,0:9:27.09:0,27,1175	0/0:38,0:29:87.09:0,87,3978	0/0:44,0:32:90.20:0,90,3910	0/0:15,0:15:32.90:0,33,1186	0/0:11,0:11:19.85:0,20,1172	0/0:15,0:15:42.12:0,42,1791	0/0:17,0:17:51.18:0,51,2277	0/0:19,0:19:57.19:0,57,2601	0/1:10,8:18:99:286,0,1416	0/0:6,0:6:15.05:0,15,731	0/0:14,0:14:39.12:0,39,1458	0/0:13,0:13:36.12:0,36,1698	0/0:12,0:12:33.10:0,33,1391	0/0:12,0:12:33.11:0,33,1423	0/0:21,0:21:57.20:0,57,2447	0/0:30,0:29:78.27:0,78,3482	0/0:26,0:26:75.26:0,75,3279	0/0:16,0:16:48.16:0,48,2206	0/0:9,0:9:27.07:0,27,1055	0/0:28,0:28:62.92:0,63,2451	0/0:17,0:17:42.09:0,42,1652	0/0:15,0:15:26.78:0,27,927	0/0:31,0:31:60.21:0,60,2806	0/0:6,0:6:11.97:0,12,457	0/0:16,0:16:48.16:0,48,2167	0/0:11,0:11:30.09:0,30,1085	0/0:10,0:10:27.09:0,27,1221
chr10	63161322	.	AACACAC	A	550.15	PASS	AB=0.900;AC=10;AF=0.185;AN=54;BaseQRankSum=0.901;DP=617;FS=3.390;HRun=0;HaplotypeScore=155.2568;InbreedingCoeff=0.5463;MQ=67.72;MQ0=9;MQRankSum=-2.918;QD=3.60;ReadPosRankSum=-0.374;VQSLOD=2.7176;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:30,9:39:8.74:56,0,9	0/0:9,0:9:9.85:0,10,39	./.	0/0:42,0:27:3.01:0,3,41	1/1:2,10:12:11.99:203,12,0	0/0:9,0:16:9.90:0,10,182	0/0:27,0:33:6.37:0,6,54	0/0:23,0:23:14.61:0,15,124	0/0:23,0:23:33.11:0,33,1053	0/0:22,0:22:51.17:0,51,1305	0/0:6,0:12:14.93:0,15,289	0/0:13,0:22:18.06:0,18,459	0/0:7,0:14:15.05:0,15,391	0/0:12,0:18:14.01:0,14,334	0/0:10,0:15:6.01:0,6,104	0/0:21,0:27:14.63:0,15,457	0/1:33,0:31:52.54:53,0,190	0/0:24,0:24:19.62:0,20,77	0/0:19,0:19:24.97:0,25,596	0/0:8,0:11:6.43:0,6,133	0/0:28,0:29:15.22:0,15,354	1/1:7,10:17:5.98:81,6,0	1/1:6,10:17:14.70:205,15,0	1/1:19,14:34:5.75:101,6,0	0/0:7,0:11:2.94:0,3,18	0/0:13,0:22:48.16:0,48,1269	0/0:14,0:24:26.74:0,27,620	0/0:1,0:10:18.06:0,18,471
chr10	63161358	.	CACAG	C	2226.01	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=5.799;DP=663;FS=0.000;HRun=0;HaplotypeScore=144.7889;InbreedingCoeff=0.8136;MQ=62.03;MQ0=14;MQRankSum=1.271;QD=16.49;ReadPosRankSum=0.964;VQSLOD=2.9904;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:41:54.06:0,54,490	1/1:1,12:13:14.78:289,15,0	0/0:24,0:10:2.01:0,2,243	0/0:28,0:13:25.91:0,26,243	0/0:23,0:23:11.39:0,11,229	0/0:20,0:20:33.46:0,33,352	0/0:35,0:34:33.45:0,33,372	1/1:1,23:23:56.96:549,57,0	0/0:17,0:17:48.09:0,48,1030	0/0:29,0:27:76.33:0,76,1226	0/0:20,0:20:41.90:0,42,497	0/0:23,0:23:36.49:0,36,537	0/0:14,0:14:36:0,36,539	0/0:24,0:24:50.09:0,50,623	0/0:19,0:19:27:0,27,317	0/0:26,0:26:38.81:0,39,621	1/1:29,9:37:91.61:1064,92,0	1/1:0,30:30:24.08:476,24,0	0/0:25,0:24:64.22:0,64,710	0/0:12,0:11:15.39:0,15,180	0/0:28,0:29:47.32:0,47,567	0/0:21,0:21:24.60:0,25,240	0/0:22,0:22:13.83:0,14,267	0/1:30,0:30:8.57:9,0,162	0/0:18,0:18:26.91:0,27,216	0/0:21,0:21:61.27:0,61,966	0/0:25,0:25:36.47:0,36,570	0/0:10,0:10:21.05:0,21,411
chr10	63162375	.	CA	C	1942.38	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.591;DP=555;FS=1.148;HRun=1;HaplotypeScore=61.5043;InbreedingCoeff=0.9985;MQ=89.90;MQ0=0;MQRankSum=-1.492;QD=33.49;ReadPosRankSum=1.306;VQSLOD=3.3818;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,126,1933	0/0:8,0:8:24.05:0,24,357	0/0:23,0:23:62.88:0,63,831	0/0:23,0:23:58.21:0,58,822	0/0:19,0:19:57.17:0,57,859	0/0:24,0:24:69.22:0,69,1075	0/0:24,0:24:72.18:0,72,1056	0/0:26,0:26:78.25:0,78,1204	0/0:19,0:19:57.13:0,57,856	0/0:18,0:18:54.18:0,54,859	0/0:11,0:11:33.10:0,33,503	0/0:21,0:21:63.20:0,63,980	0/0:18,0:18:54.18:0,54,851	0/0:20,0:20:57.12:0,57,833	0/0:17,0:17:51.13:0,51,741	0/0:18,0:18:54.15:0,54,792	0/0:30,0:30:90.23:0,90,1359	0/0:18,0:18:54.16:0,54,834	0/0:27,0:27:78.25:0,78,1222	0/0:12,0:12:33.11:0,33,526	0/0:20,0:20:60.13:0,60,842	1/1:0,16:16:39.13:543,39,0	1/1:0,10:10:30.10:415,30,0	1/1:0,32:32:81.27:1127,81,0	0/0:22,0:22:63.20:0,63,958	0/0:14,0:14:39.12:0,39,599	0/0:14,0:13:42.13:0,42,645	0/0:9,0:9:27.09:0,27,431
chr10	63162614	.	TGGG	T	2115.53	PASS	AC=16;AF=0.308;AN=52;BaseQRankSum=2.531;DP=348;FS=7.056;HRun=17;HaplotypeScore=71.8007;InbreedingCoeff=0.5527;MQ=54.54;MQ0=13;MQRankSum=-0.500;QD=14.29;ReadPosRankSum=5.660;VQSLOD=1.3736;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:18:0.36:1,0,0	1/1:3,4:7:8.51:92,9,0	0/0:10,0:2:5.82:0,6,33	0/0:13,0:6:14.60:0,15,103	./.	0/0:7,0:7:0:0,0,0	0/0:22,0:20:0:0,0,0	1/1:10,8:17:16.53:183,17,0	0/0:15,0:15:19.85:0,20,172	0/0:8,0:6:0.47:0,0,1	./.	0/0:7,0:7:0:0,0,0	0/0:5,0:5:0:0,0,0	0/0:15,0:15:0:0,0,0	0/0:7,0:7:0:0,0,0	0/0:7,0:7:0:0,0,0	1/1:7,30:36:83.52:859,84,0	1/1:5,16:21:48.56:476,49,0	0/0:17,0:17:8.09:0,8,34	0/0:2,0:2:0.47:0,0,1	0/0:24,0:24:0:0,0,0	1/1:4,5:7:12.02:123,12,0	1/1:5,3:9:9.58:81,10,0	1/1:5,20:26:41.01:428,41,0	0/0:4,0:4:0:0,0,0	0/0:16,0:15:0.47:0,0,1	0/0:12,0:13:2.07:0,2,22	0/0:3,0:2:0:0,0,0
chr10	63163808	.	G	GCA	14327.38	PASS	AB=0.618;AC=38;AF=0.679;AN=56;BaseQRankSum=-6.485;DP=817;FS=5.942;HRun=0;HaplotypeScore=114.3323;InbreedingCoeff=0.1594;MQ=60.18;MQ0=14;MQRankSum=0.437;QD=21.26;ReadPosRankSum=1.015;VQSLOD=5.3330;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:57:99:0,126,1469	1/1:9,0:15:15.89:155,16,0	0/0:29,0:9:15.03:0,15,165	0/0:34,0:14:11.96:0,12,109	0/0:23,0:22:47.73:0,48,554	0/1:8,16:24:14.83:403,0,15	0/1:12,21:35:55.01:646,0,55	0/1:17,2:38:38.46:365,0,38	1/1:10,16:26:26.80:895,27,0	0/1:9,14:22:23.19:594,0,23	1/1:12,13:24:42.49:831,42,0	1/1:9,16:26:12.65:834,13,0	1/1:4,24:28:24.40:853,24,0	0/1:5,18:23:5.99:406,0,6	1/1:4,20:23:42.14:662,42,0	0/1:10,21:31:18.61:708,0,19	1/1:9,4:39:41.98:427,42,0	1/1:9,1:21:14.92:147,15,0	1/1:12,13:24:39.13:589,39,0	1/1:4,20:24:8.75:641,9,0	1/1:25,30:56:41.62:675,42,0	0/1:11,19:29:5.83:398,0,6	0/1:14,9:23:30.67:536,0,31	1/1:8,34:43:69.24:1113,69,0	1/1:8,19:27:0.19:497,0,0	0/1:9,21:30:13.39:936,0,13	1/1:8,17:25:27.92:706,28,0	0/1:4,7:12:23.45:312,0,23
chr10	63164899	.	C	CTAT	441.27	PASS	AB=0.735;AC=1;AF=0.018;AN=56;BaseQRankSum=6.599;DP=891;FS=3.624;HRun=0;HaplotypeScore=177.7214;InbreedingCoeff=-0.0187;MQ=69.08;MQ0=4;MQRankSum=-4.551;QD=12.26;ReadPosRankSum=-1.295;VQSLOD=3.2813;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:57:99:0,162,2916	0/0:8,0:8:17.97:0,18,163	0/0:52,0:37:34.98:0,35,1251	0/0:50,0:43:20.61:0,21,1399	0/0:24,0:24:72.22:0,72,1278	0/0:20,0:20:60.19:0,60,1082	0/0:23,0:23:66.20:0,66,1162	0/0:42,0:42:60.53:0,61,710	0/1:23,13:36:99:516,0,206	0/0:49,0:49:99:0,132,2451	0/0:21,0:21:63.18:0,63,1050	0/0:33,0:33:96.30:0,96,1727	0/0:29,0:29:87.27:0,87,1557	0/0:29,0:29:75.24:0,75,1332	0/0:33,0:33:90.28:0,90,1612	0/0:21,0:21:60.12:0,60,1017	0/0:25,0:25:71.22:0,71,583	0/0:21,0:21:30.96:0,31,435	0/0:28,0:28:75.19:0,75,1261	0/0:20,0:20:60.19:0,60,1087	0/0:67,0:67:99:0,193,3371	0/0:32,0:32:64.75:0,65,716	0/0:24,0:24:34.95:0,35,441	0/0:37,0:37:64.80:0,65,697	0/0:28,0:27:78.27:0,78,1442	0/0:38,0:38:99:0,108,1977	0/0:22,0:22:66.23:0,66,1224	0/0:22,0:22:66.21:0,66,1180
chr10	63164900	.	C	CCATCCACCT	1825.98	PASS	AB=0.912;AC=3;AF=0.054;AN=56;BaseQRankSum=8.028;DP=897;FS=13.079;HRun=0;HaplotypeScore=280.1281;InbreedingCoeff=-0.0578;MQ=68.30;MQ0=4;MQRankSum=-3.222;QD=21.23;ReadPosRankSum=-3.495;VQSLOD=0.9371;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:57:99:0,165,4252	0/1:8,0:8:6.92:7,0,316	0/0:54,0:38:85.68:0,86,1707	0/0:51,0:44:51.21:0,51,1861	0/0:24,0:24:72.22:0,72,1959	0/0:20,0:20:60.17:0,60,1789	0/0:22,0:22:66.19:0,66,1640	0/1:42,0:42:99:172,0,1232	0/1:23,13:36:99:1741,0,191	0/0:48,0:48:99:0,141,3872	0/0:21,0:21:60.12:0,60,1337	0/0:33,0:33:96.23:0,96,2525	0/0:29,0:29:87.27:0,87,2599	0/0:28,0:28:78.21:0,78,2027	0/0:33,0:33:96.24:0,96,2605	0/0:22,0:22:60.10:0,60,1550	0/0:25,0:25:51.23:0,51,1378	0/0:22,0:22:57.15:0,57,1113	0/0:28,0:28:75.10:0,75,1799	0/0:20,0:20:60.20:0,60,1762	0/0:67,0:67:99:0,198,4959	0/0:32,0:32:68.32:0,68,1849	0/0:24,0:24:34.18:0,34,1085	0/0:37,0:37:5.28:0,5,1549	0/0:29,0:28:77.88:0,78,2069	0/0:39,0:39:99:0,111,3132	0/0:23,0:23:66.16:0,66,1837	0/0:21,0:21:63.19:0,63,1747
chr10	63165134	.	CCCAT	C	321.47	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=6.376;DP=665;FS=39.730;HRun=0;HaplotypeScore=122.2702;InbreedingCoeff=0.4717;MQ=51.81;MQ0=25;MQRankSum=-4.138;QD=13.98;ReadPosRankSum=-0.138;VQSLOD=1.4718;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:33:81.11:0,81,1774	0/1:9,0:9:99:100,0,281	0/0:40,0:12:26.64:0,27,391	0/0:45,0:16:25.60:0,26,402	0/0:22,0:21:54.19:0,54,1287	0/0:16,0:15:33.11:0,33,689	0/0:42,0:40:74.53:0,75,1674	0/0:36,0:32:7.64:0,8,1204	1/1:8,6:13:21.05:326,21,0	0/0:32,0:32:69.20:0,69,1492	0/0:11,0:11:30.06:0,30,648	0/0:23,0:23:54.18:0,54,1241	0/0:21,0:21:57.10:0,57,1124	0/0:19,0:18:45.11:0,45,965	0/0:16,0:16:39.05:0,39,879	0/0:20,0:17:42.14:0,42,1033	0/0:24,0:23:32.10:0,32,1246	0/0:24,0:24:54.18:0,54,1265	0/0:27,0:21:50.74:0,51,1047	0/0:9,0:9:20.95:0,21,366	0/0:59,0:56:99:0,123,2817	0/0:10,0:9:1.88:0,2,24	0/0:9,0:9:2.91:0,3,80	0/0:20,0:20:17.59:0,18,140	0/0:23,0:22:56.96:0,57,1174	0/0:37,0:37:93.20:0,93,2108	0/0:9,0:8:24.08:0,24,459	0/0:13,0:12:33.09:0,33,687
chr10	63165158	.	TCTAC	T	168.45	PASS	AB=0.893;AC=3;AF=0.054;AN=56;BaseQRankSum=6.793;DP=642;FS=14.843;HRun=0;HaplotypeScore=121.7983;InbreedingCoeff=-0.0639;MQ=50.66;MQ0=31;MQRankSum=-5.270;QD=5.43;ReadPosRankSum=-3.854;VQSLOD=0.2715;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:96.33:0,96,2223	0/1:12,1:13:54.89:55,0,309	0/0:44,0:13:37.17:0,37,681	0/0:50,0:23:52.87:0,53,940	0/0:24,0:24:69.22:0,69,1647	0/0:19,0:18:52.06:0,52,1276	0/0:31,0:29:78.14:0,78,1928	0/0:41,0:36:83.05:0,83,2170	0/0:13,0:11:19.42:0,19,313	0/0:33,0:33:90.28:0,90,2133	0/0:11,0:10:30.10:0,30,772	0/0:21,0:21:58.44:0,58,1499	0/0:18,0:18:51.09:0,51,1314	0/0:16,0:15:45.15:0,45,1141	0/0:16,0:16:45.15:0,45,1128	0/0:22,0:20:55.43:0,55,1449	0/0:24,0:23:39.74:0,40,1255	0/0:32,0:32:62.54:0,63,1287	0/0:21,0:17:45.15:0,45,1187	0/0:7,0:7:18.06:0,18,467	0/0:49,0:46:99:0,114,2947	0/1:6,0:5:59.68:69,0,60	0/0:3,0:3:3.01:0,3,84	0/1:8,4:12:99:145,0,152	0/0:20,0:18:54.16:0,54,1308	0/0:32,0:30:87.30:0,87,2271	0/0:13,0:13:39.12:0,39,848	0/0:13,0:13:24.84:0,25,905
chr10	63165186	.	CCCAT	C	833.78	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=5.243;DP=701;FS=9.268;HRun=0;HaplotypeScore=119.6543;InbreedingCoeff=0.8644;MQ=50.00;MQ0=43;MQRankSum=-4.614;QD=16.68;ReadPosRankSum=-1.921;VQSLOD=2.5971;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:90.30:0,90,1952	0/0:13,0:13:30.10:0,30,618	0/0:51,0:9:15:0,15,246	0/0:55,0:21:31.89:0,32,508	0/0:23,0:23:51.15:0,51,1133	0/0:22,0:21:57.19:0,57,1281	0/0:28,0:26:27.08:0,27,564	0/0:41,0:34:45.08:0,45,886	0/1:9,0:8:2.95:3,0,16	0/0:42,0:42:99:0,99,2219	0/0:16,0:15:30.09:0,30,689	0/0:22,0:22:39.13:0,39,955	0/0:15,0:14:27.08:0,27,586	0/0:12,0:11:27.07:0,27,583	0/0:14,0:14:33.11:0,33,780	0/0:20,0:18:39.13:0,39,940	0/0:31,0:30:54.13:0,54,1140	0/0:37,0:37:57.52:0,58,1148	0/0:25,0:18:36.10:0,36,758	0/0:15,0:15:42.13:0,42,933	0/0:39,0:38:64.89:0,65,1334	1/1:3,9:12:27.05:386,27,0	1/1:8,7:13:18.01:250,18,0	1/1:9,5:14:10.74:333,11,0	0/0:24,0:24:63.20:0,63,1449	0/0:38,0:36:81.24:0,81,1677	0/0:16,0:16:42.14:0,42,996	0/0:14,0:14:22.59:0,23,793
chr10	63165278	.	CGTGT	C	542.27	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=2.661;DP=766;FS=2.117;HRun=0;HaplotypeScore=152.3025;InbreedingCoeff=0.8873;MQ=55.20;MQ0=38;MQRankSum=-2.273;QD=11.54;ReadPosRankSum=-1.086;VQSLOD=2.9762;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:78.27:0,78,1888	0/0:5,0:5:4.25:0,4,36	0/0:54,0:17:41.30:0,41,672	0/0:59,0:17:44.48:0,44,772	0/0:24,0:23:63.22:0,63,1465	0/0:22,0:22:50.94:0,51,928	0/0:31,0:27:71.52:0,72,1424	0/0:40,0:34:62.97:0,63,412	0/0:28,0:28:57.67:0,58,1279	0/0:36,0:35:81.27:0,81,1896	0/0:21,0:21:33.11:0,33,774	0/0:25,0:23:65.16:0,65,1290	0/0:22,0:21:60.19:0,60,1207	0/0:23,0:23:51.17:0,51,1170	0/0:24,0:23:54.05:0,54,1204	0/0:21,0:19:57.20:0,57,1355	0/0:30,0:29:29.85:0,30,144	0/0:33,0:33:3.91:0,4,102	0/0:25,0:22:60.19:0,60,1327	0/0:21,0:20:45.15:0,45,1017	0/0:41,0:38:72.19:0,72,1640	1/1:7,3:10:17.97:239,18,0	1/1:11,2:13:12:170,12,0	1/1:22,2:24:21.32:270,21,0	0/0:30,0:30:69.23:0,69,1398	0/0:34,0:33:83.96:0,84,1919	0/0:20,0:18:53.54:0,54,1159	0/0:15,0:14:39.11:0,39,853
chr10	63165286	.	T	TG	270.19	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=4.310;DP=821;FS=0.000;HRun=1;HaplotypeScore=143.5145;InbreedingCoeff=0.9411;MQ=53.79;MQ0=51;MQRankSum=-1.100;QD=5.87;ReadPosRankSum=-2.416;VQSLOD=-0.5091;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:35:84.27:0,84,1086	0/0:6,0:7:5.60:0,6,46	0/0:49,0:14:23.46:0,23,434	0/0:56,0:17:45.12:0,45,550	0/0:25,0:24:66.21:0,66,855	0/0:27,0:27:64.17:0,64,771	0/0:36,0:31:74.46:0,74,966	0/0:41,0:33:84.41:0,84,580	0/0:28,0:28:57.65:0,58,730	0/0:39,0:38:99:0,100,1221	0/0:26,0:25:33.01:0,33,429	0/0:25,0:23:68.20:0,68,807	0/0:25,0:23:63.18:0,63,790	0/0:25,0:23:51.08:0,51,660	0/0:28,0:25:55.78:0,56,738	0/0:26,0:23:63.20:0,63,814	0/0:33,0:31:60.78:0,61,509	0/0:36,0:36:20.86:0,21,189	0/0:27,0:22:63.19:0,63,797	0/0:21,0:19:48.16:0,48,622	0/0:48,0:44:81.40:0,81,1046	1/1:9,1:10:18.14:131,18,0	1/1:8,3:12:11.72:101,12,0	1/1:18,5:23:18.37:175,18,0	0/0:30,0:30:78.25:0,78,1006	0/0:40,0:37:98.64:0,99,1219	0/0:23,0:20:60.03:0,60,749	0/0:16,0:14:39.11:0,39,490
chr10	63165287	.	GT	G	229.06	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=4.313;DP=819;FS=1.926;HRun=1;HaplotypeScore=137.5646;InbreedingCoeff=0.9194;MQ=53.85;MQ0=51;MQRankSum=-0.163;QD=5.33;ReadPosRankSum=-2.041;VQSLOD=-0.3505;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:35:84.28:0,84,1310	0/0:7,0:7:3.33:0,3,35	0/0:48,0:14:28.06:0,28,509	0/0:58,0:17:44.97:0,45,676	0/0:26,0:25:69.21:0,69,1067	0/0:27,0:27:40.66:0,41,842	0/0:36,0:31:75.14:0,75,1141	0/0:40,1:33:47.42:0,47,418	0/0:28,0:28:58.08:0,58,900	0/0:38,0:37:99:0,102,1521	0/0:26,0:25:33.01:0,33,525	0/0:25,0:23:67.79:0,68,959	0/0:25,0:23:63.19:0,63,943	0/0:24,0:22:51.08:0,51,793	0/0:28,0:25:55.84:0,56,890	0/0:26,0:23:63.21:0,63,972	0/0:32,1:31:16.94:0,17,280	0/0:36,0:36:18.62:0,19,146	0/0:28,0:23:63.20:0,63,968	0/0:21,0:19:48.16:0,48,750	0/0:49,0:45:81.44:0,81,1258	1/1:7,3:10:17.67:131,18,0	1/1:8,2:10:11.69:77,12,0	1/1:20,3:22:18.28:156,18,0	0/0:30,0:30:78.26:0,78,1206	0/0:40,0:37:96.78:0,97,1466	0/0:23,0:20:58.43:0,58,867	0/0:17,0:15:39.11:0,39,593
chr10	63165289	.	GTGGTGTGT	G	1621.51	PASS	AB=0.779;AC=12;AF=0.214;AN=56;BaseQRankSum=1.411;DP=805;FS=1.054;HRun=0;HaplotypeScore=205.5400;InbreedingCoeff=0.7046;MQ=53.78;MQ0=53;MQRankSum=-5.203;QD=10.46;ReadPosRankSum=-0.475;VQSLOD=2.6941;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:35:84.26:0,84,2072	0/1:2,0:7:14.13:32,0,14	0/0:45,0:12:32.06:0,32,402	0/0:57,0:17:44.78:0,45,533	0/0:26,0:25:69.23:0,69,1246	0/0:26,0:26:65.91:0,66,972	0/0:35,0:30:76.09:0,76,1426	0/1:39,0:32:44.94:718,0,45	0/0:27,0:27:57.63:0,58,993	0/0:38,0:37:84.33:0,84,1640	0/0:27,0:26:33.11:0,33,645	0/0:24,0:22:35.94:0,36,988	0/0:24,0:22:60.19:0,60,1061	0/0:23,0:21:51.07:0,51,925	0/0:28,0:25:57.66:0,58,1037	0/0:26,0:23:63.14:0,63,1208	1/1:31,1:31:40.96:702,41,0	1/1:3,27:33:11.93:222,12,0	0/0:26,0:21:57.18:0,57,950	0/0:21,0:19:48.16:0,48,994	0/0:53,0:46:85.91:0,86,1668	1/1:9,0:9:9.20:45,9,0	1/1:10,0:10:7.63:35,8,0	1/1:23,0:22:1.98:33,2,0	0/0:30,0:30:55.53:0,56,1383	0/0:40,0:37:54.85:0,55,1525	0/0:22,0:21:24.14:0,24,949	0/0:15,0:13:39.13:0,39,990
chr10	63165291	.	GGT	G	3618.42	PASS	AB=0.967;AC=35;AF=0.700;AN=50;BaseQRankSum=-1.601;DP=799;FS=4.380;HRun=0;HaplotypeScore=132.9041;InbreedingCoeff=0.2309;MQ=53.62;MQ0=54;MQRankSum=2.195;QD=6.22;ReadPosRankSum=0.682;VQSLOD=2.7753;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:35,0:33:89.56:90,0,317	./.	./.	./.	0/1:25,0:24:21.61:22,0,113	1/1:25,1:27:5.91:281,6,0	1/1:28,6:30:7:389,7,0	0/0:41,0:33:1.15:0,1,32	0/0:18,0:29:12.91:0,13,99	0/1:38,0:37:12.62:223,0,13	1/1:12,15:26:9.02:101,9,0	1/1:22,2:22:7.39:184,7,0	1/1:24,0:22:24.88:183,25,0	1/1:21,2:21:4.97:77,5,0	1/1:27,1:25:25.11:197,25,0	0/1:27,0:24:0.21:81,0,0	1/1:31,0:31:7.61:104,8,0	1/1:33,0:33:11.20:53,11,0	1/1:24,0:20:10.27:98,10,0	1/1:16,4:19:18.94:203,19,0	1/1:51,2:46:33.96:432,34,0	0/0:9,0:9:0:0,0,0	0/0:8,0:10:0:0,0,0	0/0:17,0:23:0.94:0,1,2	1/1:22,5:28:38.45:369,38,0	1/1:29,10:36:21.25:231,21,0	1/1:22,1:20:17.33:173,17,0	0/1:12,3:13:93.20:127,0,93
chr10	63165324	.	GTA	G	2026.04	PASS	AB=0.975;AC=27;AF=0.500;AN=54;BaseQRankSum=2.685;DP=681;FS=26.718;HRun=0;HaplotypeScore=129.2125;InbreedingCoeff=-0.3401;MQ=46.22;MQ0=66;MQRankSum=3.755;QD=3.77;ReadPosRankSum=2.087;VQSLOD=1.3107;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:31,0:29:36.11:36,0,390	0/0:7,0:7:11.30:0,11,66	0/1:26,0:4:1.87:2,0,27	./.	0/0:11,4:12:13.92:0,14,256	0/1:24,2:25:11.60:170,0,12	0/1:39,2:36:99:112,0,218	0/0:41,0:34:8.11:0,8,461	0/1:16,0:16:4.46:4,0,71	0/1:23,0:20:25.60:26,0,256	0/1:21,1:21:20:20,0,43	1/1:15,0:14:19.72:166,20,0	1/1:17,3:18:6.48:292,6,0	0/1:14,1:13:19.07:118,0,19	0/1:20,0:19:63.66:129,0,64	0/1:21,1:18:48.20:133,0,48	0/1:32,1:31:54.82:55,0,222	0/0:38,0:38:9.42:0,9,235	0/1:24,0:14:40.77:41,0,147	0/1:14,0:11:2.06:80,0,2	0/1:66,1:55:99:269,0,136	0/1:6,0:5:0:0,0,0	1/1:11,0:11:2.99:25,3,0	1/1:30,1:28:14.48:114,14,0	0/1:29,1:29:99:162,0,126	0/1:18,0:14:21.26:78,0,21	0/1:9,1:8:18.58:95,0,19	0/1:15,0:12:54.75:55,0,177
chr10	63165393	.	GGT	G	8602.18	PASS	AB=0.742;AC=43;AF=0.768;AN=56;BaseQRankSum=0.057;DP=772;FS=1.548;HRun=0;HaplotypeScore=116.5126;InbreedingCoeff=0.4442;MQ=48.77;MQ0=48;MQRankSum=3.359;QD=15.42;ReadPosRankSum=6.363;VQSLOD=4.7206;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:39:90.28:0,90,1358	1/1:3,2:4:3.01:37,3,0	0/0:71,1:10:20.93:0,21,271	0/0:80,1:9:14.94:0,15,182	0/0:21,0:21:47.95:0,48,711	1/1:3,14:15:27.09:338,27,0	1/1:9,27:34:29.54:374,30,0	0/1:41,15:50:99:568,0,166	1/1:7,8:14:27.24:330,27,0	0/1:23,3:21:25.24:395,0,25	1/1:3,4:5:15.05:187,15,0	1/1:3,16:18:36.12:451,36,0	1/1:2,12:14:8.92:112,9,0	0/1:2,9:11:4.28:170,0,4	1/1:6,9:14:19.60:217,20,0	1/1:5,16:21:3.65:346,4,0	1/1:21,19:40:70.15:876,70,0	1/1:11,9:20:45.11:512,45,0	1/1:10,14:22:39.12:471,39,0	1/1:1,4:5:6.02:75,6,0	1/1:32,89:115:97.56:1405,98,0	1/1:3,0:7:1.09:3,1,0	1/1:4,0:9:4.97:23,5,0	0/1:21,0:23:8.57:9,0,10	1/1:12,5:17:42.13:516,42,0	1/1:5,15:19:48.06:590,48,0	0/1:3,7:9:7.35:170,0,7	1/1:1,14:15:16.11:427,16,0
chr10	63165409	.	AGT	A	2291.44	PASS	AB=0.877;AC=14;AF=0.259;AN=54;BaseQRankSum=5.432;DP=786;FS=2.787;HRun=0;HaplotypeScore=138.8528;InbreedingCoeff=0.7044;MQ=46.77;MQ0=48;MQRankSum=-2.952;QD=12.73;ReadPosRankSum=-0.005;VQSLOD=3.6357;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:38:90.27:0,90,1405	./.	0/0:75,0:9:20.94:0,21,245	0/0:80,0:8:10.94:0,11,146	0/0:17,0:17:48.16:0,48,784	0/0:20,0:18:28.53:0,29,217	0/0:37,0:35:45.32:0,45,373	0/1:42,13:48:99:577,0,184	1/1:7,9:17:5.15:329,5,0	0/0:27,0:21:46.68:0,47,356	0/0:9,0:9:22.53:0,23,202	0/0:25,0:24:39.58:0,40,271	0/1:16,1:17:38.31:38,0,98	0/0:16,0:16:25.19:0,25,229	0/0:19,0:18:21.32:0,21,243	0/0:22,0:21:25.35:0,25,163	1/1:9,27:36:57.68:733,58,0	1/1:7,11:18:48.15:600,48,0	0/0:23,0:17:13.71:0,14,209	0/0:6,0:6:14.50:0,15,126	0/0:113,2:109:61.37:0,61,604	1/1:3,5:7:8.45:58,8,0	1/1:5,5:10:6.49:74,6,0	1/1:15,4:18:5.78:56,6,0	0/0:16,0:16:11.94:0,12,106	0/0:23,0:23:53.48:0,53,349	0/0:17,0:16:30.53:0,31,280	0/0:15,0:15:29.63:0,30,134
chr10	63165736	.	ACAG	A	6893.09	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=11.345;DP=568;FS=2.090;HRun=0;HaplotypeScore=112.4770;InbreedingCoeff=0.9822;MQ=65.14;MQ0=0;MQRankSum=-4.459;QD=46.57;ReadPosRankSum=2.690;VQSLOD=7.0578;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,129,2968	1/1:0,3:3:9.03:159,9,0	0/0:30,0:29:81.28:0,81,1849	0/0:19,0:18:37.76:0,38,987	0/0:13,0:13:39.13:0,39,894	0/0:17,0:17:51.18:0,51,1198	0/0:36,0:36:99:0,108,2444	1/1:1,19:20:54.18:928,54,0	1/1:0,19:19:48.16:847,48,0	0/0:15,0:15:45.15:0,45,1020	0/0:9,0:9:27.09:0,27,638	0/0:27,0:27:81.26:0,81,1862	0/0:18,0:18:48.15:0,48,1085	0/0:33,0:33:99:0,99,2274	0/0:21,0:21:63.22:0,63,1455	0/0:21,1:22:10.26:0,10,1265	1/1:1,26:27:72.25:1270,72,0	1/1:0,22:22:66.23:1159,66,0	0/0:19,0:19:54.18:0,54,1202	0/0:13,0:13:36.12:0,36,810	0/0:33,0:33:96.33:0,96,2195	1/1:1,15:16:48.16:840,48,0	1/1:1,13:15:36.12:633,36,0	1/1:0,26:26:60.21:1058,60,0	0/0:10,0:10:30.10:0,30,690	0/0:15,0:15:45.15:0,45,1063	0/0:17,0:17:51.17:0,51,1153	0/0:9,0:9:27.07:0,27,566
chr10	63166157	.	C	CA	7347.18	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-0.893;DP=651;FS=0.000;HRun=1;HaplotypeScore=70.2143;InbreedingCoeff=0.9947;MQ=65.40;MQ0=1;MQRankSum=-2.015;QD=40.59;ReadPosRankSum=1.744;VQSLOD=5.3742;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:78.23:0,78,993	1/1:0,5:5:12.04:180,12,0	0/0:22,0:21:51.01:0,51,617	0/0:28,0:26:61.23:0,61,733	0/0:28,0:28:75.23:0,75,959	0/0:20,0:20:57.19:0,57,740	0/0:20,0:20:57.19:0,57,740	1/1:1,22:23:66.16:943,66,0	1/1:0,25:25:75.25:1124,75,0	0/0:35,0:35:99:0,105,1325	0/0:16,0:16:48.14:0,48,609	0/0:26,0:26:78.25:0,78,1012	0/0:19,0:19:57.17:0,57,725	0/0:20,0:20:57.18:0,57,738	0/0:24,0:24:72.22:0,72,920	0/0:27,0:27:78.25:0,78,1012	1/1:0,20:20:54.18:809,54,0	1/1:2,27:29:78.26:1169,78,0	0/0:17,0:17:48.15:0,48,611	0/0:22,0:22:63.20:0,63,817	0/0:42,0:42:99:0,126,1621	1/1:1,20:21:57.15:829,57,0	1/1:3,17:20:45.15:674,45,0	1/1:2,36:38:99:1619,108,0	0/0:18,0:18:54.18:0,54,701	0/0:25,0:25:69.21:0,69,882	0/0:23,0:23:66.21:0,66,857	0/0:11,0:11:30.10:0,30,389
chr10	63166736	.	CTGTGTG	C	1644.88	PASS	AB=0.902;AC=26;AF=0.520;AN=50;BaseQRankSum=-2.637;DP=467;FS=1.700;HRun=0;HaplotypeScore=101.3842;InbreedingCoeff=0.4547;MQ=65.39;MQ0=20;MQRankSum=1.622;QD=6.77;ReadPosRankSum=0.893;VQSLOD=1.6546;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:28:34:34,0,297	0/0:5,0:4:3.01:0,3,72	0/0:28,0:15:3.01:0,3,50	0/0:31,0:22:3.01:0,3,63	0/1:15,0:14:20.45:20,0,59	1/1:4,4:7:3.01:57,3,0	1/1:18,0:18:9.03:172,9,0	0/0:26,0:25:27.56:0,28,538	0/0:25,0:25:14.55:0,15,298	1/1:12,4:13:11.99:161,12,0	1/1:3,0:5:11.99:168,12,0	1/1:20,1:21:0.94:2,1,0	1/1:5,6:10:5.88:97,6,0	0/1:10,13:23:0.09:0,0,0	./.	1/1:6,0:13:15.05:250,15,0	0/0:22,0:22:29.42:0,29,468	0/0:9,0:9:15.05:0,15,330	1/1:11,0:11:5.88:48,6,0	1/1:5,6:10:2.75:43,3,0	0/1:30,0:30:35.82:403,0,36	0/0:14,0:13:3.01:0,3,67	0/0:16,0:16:15.03:0,15,310	0/0:25,0:24:33.11:0,33,785	1/1:7,0:12:3.01:61,3,0	1/1:9,8:16:15.05:293,15,0	./.	./.
chr10	63166767	.	TGTGTGTGA	T	2223.33	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=-1.451;DP=436;FS=6.528;HRun=0;HaplotypeScore=91.5101;InbreedingCoeff=0.0303;MQ=47.36;MQ0=28;MQRankSum=2.474;QD=8.75;ReadPosRankSum=-0.901;VQSLOD=0.5559;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:34,0:33:99:130,0,365	0/0:5,0:4:3.01:0,3,72	0/0:6,0:1:3.01:0,3,50	0/0:8,0:3:3.01:0,3,63	0/1:16,0:15:50.19:78,0,50	0/1:12,0:11:7.99:90,0,8	0/1:15,0:12:50.74:196,0,51	0/0:25,0:24:39.09:0,39,696	0/0:17,0:17:15.92:0,16,318	0/1:11,0:9:1.44:168,0,1	1/1:12,0:12:20.65:225,21,0	0/0:6,19:25:7.95:0,8,65	0/1:13,0:12:61.85:95,0,62	0/1:24,0:23:31.34:31,0,61	0/0:10,0:10:3.01:0,3,37	0/1:11,0:11:4.89:269,0,5	0/0:22,0:20:29.64:0,30,488	0/0:9,0:9:18.04:0,18,354	1/1:12,0:10:5.85:48,6,0	1/1:17,0:16:14.44:132,14,0	0/1:32,0:29:99:449,0,125	0/0:10,0:9:2.88:0,3,66	0/0:11,0:10:15.03:0,15,310	0/0:27,0:24:38.49:0,38,827	0/1:16,0:14:29.04:64,0,29	0/1:23,0:22:79.32:388,0,79	0/0:7,0:7:8.98:0,9,73	1/1:6,0:2:2.99:24,3,0
chr10	63167027	.	GGTGT	G	2768.89	PASS	AB=0.824;AC=35;AF=0.673;AN=52;BaseQRankSum=0.774;DP=550;FS=6.574;HRun=0;HaplotypeScore=119.2639;InbreedingCoeff=0.5696;MQ=66.12;MQ0=5;MQRankSum=-3.287;QD=7.52;ReadPosRankSum=1.043;VQSLOD=1.6698;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:22,6:33:89.16:111,0,89	./.	0/0:38,0:23:9.03:0,9,133	0/0:25,0:17:6.02:0,6,90	0/1:9,2:11:31.94:36,0,32	1/1:12,5:19:17.63:207,18,0	1/1:10,3:15:9.49:104,9,0	./.	0/0:12,0:17:11.84:0,12,138	1/1:15,4:19:13.25:214,13,0	1/1:7,1:9:2.67:28,3,0	1/1:7,9:17:24.07:359,24,0	1/1:15,10:25:12.04:189,12,0	1/1:11,5:17:21.06:293,21,0	1/1:13,8:22:20.70:304,21,0	0/0:4,0:12:24.80:0,25,112	1/1:12,0:22:8.21:82,8,0	1/1:10,0:20:12.01:112,12,0	1/1:13,2:16:13.32:175,13,0	1/1:7,2:9:3.01:47,3,0	0/1:41,5:47:18.80:19,0,54	0/0:8,0:10:9.03:0,9,186	0/0:10,0:18:21.07:0,21,369	0/0:16,0:36:56.40:0,56,981	1/1:9,5:13:11.97:160,12,0	1/1:20,6:26:15.04:236,15,0	1/1:11,7:20:18.04:244,18,0	1/1:3,0:3:3.01:33,3,0
chr10	63167046	.	G	GC	135.61	PASS	AC=2;AF=0.037;AN=54;BaseQRankSum=2.815;DP=525;FS=0.000;HRun=0;HaplotypeScore=109.6019;InbreedingCoeff=0.7880;MQ=52.74;MQ0=12;MQRankSum=-4.386;QD=11.30;ReadPosRankSum=-2.864;VQSLOD=2.9405;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:80.54:0,81,886	./.	0/0:28,0:9:24.06:0,24,311	0/0:26,0:10:24.05:0,24,299	0/0:10,0:9:14.81:0,15,122	0/0:20,0:20:53.50:0,54,587	0/0:21,0:21:41.97:0,42,495	1/1:2,10:11:32.60:230,33,0	0/0:17,0:17:24.31:0,24,348	0/0:22,0:21:57.83:0,58,647	0/0:10,0:10:17.89:0,18,221	0/0:19,0:19:47.24:0,47,454	0/0:24,0:24:50.73:0,51,584	0/0:21,0:21:51.42:0,51,594	0/0:23,0:23:56.49:0,56,593	0/0:15,0:14:38.54:0,39,328	0/0:12,0:12:11.49:0,11,67	0/0:10,0:10:8.88:0,9,28	0/0:18,0:14:35.20:0,35,360	0/0:12,0:12:14.94:0,15,181	0/0:47,0:47:91.76:0,92,1255	0/0:9,0:9:15.05:0,15,208	0/0:16,0:16:24.02:0,24,266	0/0:40,0:40:74.85:0,75,761	0/0:17,0:16:32.77:0,33,359	0/0:19,0:19:53.64:0,54,612	0/0:17,0:17:41.21:0,41,420	0/0:2,0:2:6.02:0,6,80
chr10	63167048	.	GT	G	87.40	PASS	AB=1.000;AC=5;AF=0.093;AN=54;BaseQRankSum=6.426;DP=525;FS=0.000;HRun=1;HaplotypeScore=108.5026;InbreedingCoeff=0.7102;MQ=52.99;MQ0=11;MQRankSum=-6.233;QD=2.57;ReadPosRankSum=2.252;VQSLOD=-0.4919;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:88.23:0,88,901	./.	0/0:25,0:8:21.06:0,21,260	0/0:24,0:9:22.09:0,22,252	0/0:12,0:11:17.41:0,17,143	0/0:20,0:20:43.80:0,44,494	0/0:21,0:21:33.96:0,34,418	1/1:2,10:11:31.12:167,31,0	0/0:14,0:14:22.49:0,22,289	0/0:21,0:20:46.13:0,46,509	0/0:10,0:10:15.52:0,16,191	0/0:19,0:19:36.28:0,36,360	0/0:25,0:25:47.07:0,47,511	0/0:21,0:21:42.91:0,43,511	0/0:22,0:22:45.96:0,46,477	0/0:16,0:15:33.70:0,34,230	0/1:12,0:12:9.78:10,0,35	1/1:10,0:10:8.88:30,9,0	0/0:17,1:14:25.93:0,26,308	0/0:12,0:12:19.30:0,19,229	0/0:47,0:47:88.88:0,89,1090	0/0:8,0:8:15.05:0,15,211	0/0:16,0:16:24.05:0,24,284	0/0:41,0:41:75.26:0,75,835	0/0:17,0:16:27.81:0,28,305	0/0:20,0:20:45.34:0,45,495	0/0:17,0:17:28.20:0,28,314	0/0:2,0:2:5.93:0,6,55
chr10	63167525	.	A	ACC	3888.05	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=14.238;DP=586;FS=0.855;HRun=1;HaplotypeScore=95.4839;InbreedingCoeff=0.9962;MQ=78.59;MQ0=0;MQRankSum=-13.747;QD=32.95;ReadPosRankSum=0.868;VQSLOD=3.8452;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,150,2417	1/1:1,10:11:33.11:454,33,0	0/0:19,0:19:39.68:0,40,663	0/0:15,0:15:38.66:0,39,540	0/0:35,0:35:99:0,105,1653	0/0:18,0:18:54.15:0,54,832	0/0:18,0:18:48.11:0,48,708	1/1:1,8:9:15.05:214,15,0	1/1:2,19:21:63.20:896,63,0	0/0:28,0:28:84.24:0,84,1319	0/0:26,0:26:78.27:0,78,1272	0/0:21,0:21:60.20:0,60,979	0/0:15,0:15:45.15:0,45,730	0/0:25,0:25:75.26:0,75,1206	0/0:28,0:28:84.27:0,84,1346	0/0:29,0:29:87.30:0,87,1418	1/1:1,7:8:20.46:285,20,0	1/1:2,10:12:35.43:439,35,0	0/0:18,0:18:54.16:0,54,832	0/0:13,0:13:39.13:0,39,636	0/0:37,0:37:99:0,111,1745	1/1:4,15:19:45.14:683,45,0	1/1:2,13:18:27.83:518,28,0	1/1:8,12:19:32.64:400,33,0	0/0:15,0:15:42.14:0,42,680	0/0:21,0:21:63.22:0,63,1027	0/0:26,0:26:75.26:0,75,1219	0/0:11,0:11:33.11:0,33,538
chr10	63167526	.	T	TTCG	5121.33	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=14.608;DP=602;FS=7.156;HRun=0;HaplotypeScore=112.9576;InbreedingCoeff=0.9988;MQ=78.24;MQ0=0;MQRankSum=-14.940;QD=37.66;ReadPosRankSum=-0.667;VQSLOD=5.5689;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,147,2513	1/1:1,10:11:33.11:565,33,0	0/0:18,0:18:38.37:0,38,618	0/0:17,0:17:38.67:0,39,594	0/0:35,0:35:99:0,99,1742	0/0:17,0:17:48.16:0,48,847	0/0:17,0:17:51.14:0,51,835	1/1:3,8:11:21.04:331,21,0	1/1:4,19:23:66.22:1144,66,0	0/0:27,0:27:78.27:0,78,1364	0/0:27,0:27:78.27:0,78,1376	0/0:20,0:20:60.20:0,60,1028	0/0:15,0:15:42.13:0,42,713	0/0:25,0:25:63.22:0,63,1110	0/0:27,0:27:81.28:0,81,1429	0/0:29,0:29:87.28:0,87,1500	1/1:4,6:10:24.07:382,24,0	1/1:3,10:13:36.12:619,36,0	0/0:18,0:18:48.16:0,48,839	0/0:13,0:13:39.13:0,39,677	0/0:36,0:36:99:0,105,1846	1/1:9,16:25:51.09:771,51,0	1/1:7,13:20:48.13:758,48,0	1/1:12,11:22:33.58:552,34,0	0/0:15,0:15:39.13:0,39,683	0/0:21,0:21:60.20:0,60,1034	0/0:26,0:26:72.20:0,72,1185	0/0:11,0:11:33.11:0,33,582
chr10	63169128	.	AC	A	6608.11	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=18.467;DP=792;FS=3.724;HRun=1;HaplotypeScore=94.9549;InbreedingCoeff=0.9733;MQ=67.10;MQ0=2;MQRankSum=1.883;QD=39.33;ReadPosRankSum=-0.385;VQSLOD=4.9242;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:58:99:0,175,2780	1/1:0,12:12:36.12:503,36,0	0/0:7,0:7:15.04:0,15,215	0/0:6,0:6:4.70:0,5,68	0/0:21,0:21:63.21:0,63,1007	0/0:27,0:27:81.28:0,81,1290	0/0:38,0:38:99:0,114,1791	1/1:0,26:26:78.22:1036,78,0	0/0:23,0:23:69.24:0,69,1096	0/0:42,0:42:99:0,123,1941	0/0:15,0:15:45.14:0,45,692	0/0:30,0:30:90.31:0,90,1438	0/0:34,0:34:99:0,102,1609	0/0:32,0:32:93.32:0,93,1479	0/0:45,0:45:99:0,135,2153	0/0:28,0:28:84.27:0,84,1316	1/1:0,43:43:99:1719,123,0	1/1:0,20:20:60.20:839,60,0	0/0:34,0:33:96.33:0,96,1532	0/0:16,0:16:48.16:0,48,762	0/0:55,0:53:99:0,160,2517	1/1:0,27:27:69.19:943,69,0	1/1:0,16:16:45.08:604,45,0	1/1:0,24:24:69.23:965,69,0	0/0:28,0:28:84.27:0,84,1315	0/0:33,0:33:99:0,99,1579	0/0:32,0:32:93.30:0,93,1455	0/0:20,0:20:60.20:0,60,945
chr10	63169428	.	CT	C	14082.09	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=12.932;DP=682;FS=0.282;HRun=1;HaplotypeScore=73.2638;InbreedingCoeff=0.9999;MQ=73.67;MQ0=0;MQRankSum=-2.908;QD=37.55;ReadPosRankSum=4.058;VQSLOD=5.3245;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,138,1909	0/0:10,0:10:30.07:0,30,405	0/0:21,0:21:57.05:0,57,804	0/0:23,0:23:50.49:0,50,720	0/0:22,0:22:66.17:0,66,907	1/1:0,33:33:96.32:1340,96,0	1/1:0,29:29:72.24:1006,72,0	0/0:34,0:34:99:0,99,1412	0/0:24,0:24:72.24:0,72,1069	1/1:0,32:32:96.27:1279,96,0	1/1:0,18:18:42.14:585,42,0	1/1:0,26:26:72.19:1006,72,0	1/1:0,18:18:45.15:628,45,0	1/1:2,19:21:57.17:779,57,0	1/1:0,23:23:66.18:899,66,0	1/1:0,19:19:51.17:713,51,0	0/0:28,0:28:84.27:0,84,1228	0/0:19,0:19:57.18:0,57,831	1/1:0,20:20:60.13:760,60,0	1/1:0,17:17:48.12:643,48,0	1/1:0,43:43:99:1550,111,0	0/0:21,0:21:63.18:0,63,881	0/0:21,0:21:57.19:0,57,852	0/0:37,0:37:99:0,111,1594	1/1:1,23:24:66.21:898,66,0	1/1:0,26:26:78.22:1039,78,0	1/1:0,13:13:36.12:495,36,0	1/1:0,13:13:33.11:461,33,0
chr10	63169582	.	AG	A	13702.07	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=12.730;DP=632;FS=0.933;HRun=1;HaplotypeScore=64.6064;InbreedingCoeff=0.9982;MQ=78.60;MQ0=0;MQRankSum=-0.278;QD=38.93;ReadPosRankSum=3.987;VQSLOD=5.4506;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,102,1576	0/0:7,0:7:21.07:0,21,335	0/0:18,0:18:54.16:0,54,778	0/0:15,0:15:40.02:0,40,605	0/0:11,0:11:33.11:0,33,527	1/1:0,17:17:51.17:713,51,0	1/1:0,26:26:60.20:839,60,0	0/0:29,0:29:84.24:0,84,1256	0/0:31,0:31:93.29:0,93,1436	1/1:0,25:25:75.25:1049,75,0	1/1:0,20:20:57.15:775,57,0	1/1:0,27:27:81.27:1133,81,0	1/1:1,26:27:78.26:1077,78,0	1/1:0,19:19:47.82:671,48,0	1/1:0,27:27:81.27:1133,81,0	1/1:0,19:19:54.18:755,54,0	0/0:25,0:24:72.19:0,72,1117	0/0:27,0:27:81.28:0,81,1280	1/1:0,26:26:75.20:996,75,0	1/1:0,17:17:48.09:629,48,0	1/1:0,45:45:99:1588,114,0	0/0:17,0:17:51.16:0,51,790	0/0:19,0:19:57.17:0,57,864	0/0:46,0:46:99:0,138,2175	1/1:0,11:11:33.11:462,33,0	1/1:0,23:23:69.23:960,69,0	1/1:0,17:17:48.16:671,48,0	1/1:0,6:6:18.06:252,18,0
chr10	63169968	.	G	GT	4595.14	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=14.685;DP=533;FS=4.455;HRun=1;HaplotypeScore=69.5701;InbreedingCoeff=0.9948;MQ=73.33;MQ0=0;MQRankSum=-7.675;QD=41.77;ReadPosRankSum=-0.147;VQSLOD=5.0901;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:84.24:0,84,1135	1/1:0,9:10:30.10:472,30,0	0/0:11,0:11:15.88:0,16,241	0/0:13,0:12:29.27:0,29,329	0/0:26,0:26:78.26:0,78,1085	0/0:26,0:25:78.26:0,78,1090	0/0:13,0:13:39.13:0,39,545	1/1:1,26:22:66.19:999,66,0	0/0:10,0:10:30.10:0,30,420	0/0:24,0:24:72.24:0,72,1007	0/0:29,0:29:87.29:0,87,1217	0/0:19,0:19:57.19:0,57,797	0/0:20,0:20:60.20:0,60,839	0/0:10,0:10:30.10:0,30,418	0/0:21,0:21:60.17:0,60,805	0/0:9,0:9:27.09:0,27,376	1/1:2,17:18:48.16:753,48,0	1/1:1,13:14:39.13:619,39,0	0/0:32,0:32:96.29:0,96,1305	0/0:25,0:25:75.24:0,75,1031	0/0:7,0:7:21.07:0,21,294	1/1:2,14:16:45.15:697,45,0	1/1:1,16:17:48.16:767,48,0	1/1:1,6:7:18.06:288,18,0	0/0:23,0:23:66.22:0,66,920	0/0:30,0:30:87.27:0,87,1198	0/0:23,0:23:69.23:0,69,963	0/0:24,0:24:72.24:0,72,1007
chr10	63169970	.	T	TA	1727.48	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=10.110;DP=532;FS=4.292;HRun=7;HaplotypeScore=80.8790;InbreedingCoeff=0.9925;MQ=71.57;MQ0=0;MQRankSum=-10.931;QD=23.03;ReadPosRankSum=-2.586;VQSLOD=2.7705;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:63.09:0,63,608	1/1:2,9:11:27.08:320,27,0	0/0:10,0:10:20.50:0,20,173	0/0:12,0:11:17.51:0,18,154	0/0:24,0:24:69.10:0,69,661	0/0:26,0:25:69.09:0,69,660	0/0:13,0:13:33.05:0,33,319	1/1:11,19:25:54.16:635,54,0	0/0:11,0:11:27.04:0,27,261	0/0:25,0:25:71.97:0,72,672	0/0:29,0:29:78.10:0,78,747	0/0:18,0:19:56.10:0,56,520	0/0:19,0:20:53.07:0,53,486	0/0:11,0:11:29.99:0,30,280	0/0:19,0:19:57.09:0,57,550	0/0:8,0:8:24.04:0,24,232	1/1:6,14:19:45.06:501,45,0	1/1:3,11:14:36.11:432,36,0	0/0:28,0:28:69.08:0,69,653	0/0:24,0:24:60.06:0,60,566	0/0:7,0:7:21.03:0,21,203	0/0:17,0:17:41.75:0,42,326	0/0:18,0:18:50.73:0,51,394	0/0:9,0:9:20.93:0,21,166	0/0:24,0:24:69.09:0,69,657	0/0:30,0:30:78.12:0,78,753	0/0:23,0:23:63.10:0,63,608	0/0:24,0:24:72.12:0,72,695
chr10	63170717	.	A	AC	572.52	PASS	AB=1.000;AC=34;AF=0.810;AN=42;BaseQRankSum=-1.424;DP=68;FS=3.654;HRun=5;HaplotypeScore=14.7421;InbreedingCoeff=0.1389;MQ=92.32;MQ0=1;MQRankSum=-1.590;QD=13.01;ReadPosRankSum=1.507;VQSLOD=0.5881;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:4:2.98:0,3,32	./.	0/0:11,0:9:11.73:0,12,101	0/1:10,0:7:12.70:13,0,18	0/0:4,0:4:8.99:0,9,80	1/1:2,0:2:3.01:39,3,0	1/1:1,1:2:3.01:39,3,0	1/1:2,0:2:3.01:39,3,0	1/1:0,1:1:3.01:39,3,0	1/1:2,0:2:3.01:39,3,0	1/1:1,1:2:3.01:39,3,0	./.	1/1:1,0:1:3.01:39,3,0	1/1:0,1:1:3.01:39,3,0	1/1:1,0:1:2.99:24,3,0	1/1:0,1:1:3.01:39,3,0	1/1:2,0:2:6.02:78,6,0	./.	1/1:5,0:5:3.01:39,3,0	1/1:1,0:1:3.01:39,3,0	0/1:3,0:3:23.38:33,0,23	1/1:2,0:2:3.01:39,3,0	1/1:2,0:2:3.01:35,3,0	1/1:2,2:4:3.01:39,3,0	./.	./.	./.	./.
chr10	63171668	.	ACAC	A	568.76	PASS	AC=26;AF=0.650;AN=40;BaseQRankSum=-4.343;DP=318;FS=1.297;HRun=0;HaplotypeScore=67.0534;InbreedingCoeff=0.5043;MQ=68.79;MQ0=19;MQRankSum=3.063;QD=3.90;ReadPosRankSum=1.478;VQSLOD=1.2958;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:18:3.01:34,3,0	0/0:4,0:4:6.02:0,6,72	./.	./.	./.	1/1:6,4:10:3.01:39,3,0	1/1:11,2:12:3.01:39,3,0	0/0:23,0:23:6.49:0,6,66	1/1:9,0:7:6.02:76,6,0	1/1:12,0:11:6.02:76,6,0	./.	./.	1/1:8,4:12:3.01:39,3,0	1/1:15,0:14:3.01:40,3,0	1/1:5,7:12:9.03:116,9,0	1/1:8,0:6:3.01:33,3,0	0/0:14,0:14:11.26:0,11,153	0/0:11,0:11:8.69:0,9,99	./.	./.	1/1:13,0:11:6.02:77,6,0	0/0:9,0:9:6.01:0,6,59	0/0:6,0:6:2.97:0,3,20	0/0:11,0:11:9.44:0,9,80	1/1:4,0:3:3.01:34,3,0	1/1:6,3:9:5.84:66,6,0	1/1:9,0:7:3.01:40,3,0	./.
chr10	63171710	.	C	CCA	331.39	PASS	AB=0.956;AC=12;AF=0.222;AN=54;BaseQRankSum=5.531;DP=330;FS=0.000;HRun=0;HaplotypeScore=64.8124;InbreedingCoeff=0.2495;MQ=51.18;MQ0=34;MQRankSum=-5.557;QD=4.95;ReadPosRankSum=-0.218;VQSLOD=2.2068;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:24:21.07:0,21,272	1/1:4,0:4:5.88:51,6,0	0/0:36,0:9:25.82:0,26,233	0/0:27,0:5:8.29:0,8,97	0/0:13,0:10:15.05:0,15,206	0/0:7,0:7:5.72:0,6,58	0/0:21,0:19:40.22:0,40,316	0/1:7,0:7:9.94:29,0,10	0/1:10,0:8:14.69:15,0,30	0/0:12,0:9:26.33:0,26,198	0/0:4,0:4:2.92:0,3,17	0/0:4,0:4:2.03:0,2,5	0/0:6,0:6:5.89:0,6,37	0/0:12,0:11:5.97:0,6,44	0/0:14,0:13:23.74:0,24,218	0/0:8,0:6:0.37:0,0,19	1/1:13,0:12:3.81:155,4,0	0/1:10,1:10:16.83:83,0,17	0/0:8,0:7:11.59:0,12,66	0/0:7,0:3:2.75:0,3,16	0/0:33,0:31:24.11:0,24,186	1/1:7,1:8:0.89:2,1,0	1/1:3,1:4:3.01:34,3,0	0/1:9,1:10:21.20:96,0,21	0/0:5,0:4:9.33:0,9,77	0/0:8,0:8:19.55:0,20,104	0/0:7,0:5:10.58:0,11,110	./.
chr10	63171711	.	CCA	C	1207.76	PASS	AB=0.987;AC=27;AF=0.519;AN=52;BaseQRankSum=-2.350;DP=314;FS=2.597;HRun=0;HaplotypeScore=46.3252;InbreedingCoeff=-0.0504;MQ=52.10;MQ0=35;MQRankSum=1.403;QD=6.10;ReadPosRankSum=3.514;VQSLOD=2.5155;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:24:26.96:0,27,255	./.	0/0:35,0:9:7.11:0,7,95	0/0:26,0:5:11.13:0,11,57	0/0:13,0:10:14.99:0,15,143	0/1:7,0:7:14.50:18,0,15	0/1:20,1:19:9.07:273,0,9	0/1:6,0:6:11.75:21,0,12	1/1:7,2:7:14.44:88,14,0	0/1:12,0:9:3.35:129,0,3	1/1:4,0:4:3:25,3,0	1/1:1,3:4:5.93:55,6,0	0/1:6,0:6:12.77:33,0,13	0/1:12,0:11:11.70:12,0,14	0/1:14,0:13:64.95:96,0,65	0/1:8,0:6:11:42,0,11	0/1:9,0:8:17.76:51,0,18	0/1:9,0:8:3.62:4,0,31	1/1:9,0:7:14.89:115,15,0	1/1:7,0:3:3:25,3,0	1/1:33,0:31:13.10:121,13,0	0/0:8,0:8:0:0,0,0	./.	0/1:8,0:8:15.19:16,0,15	0/1:5,0:4:9.43:41,0,9	1/1:8,0:8:18:158,18,0	0/1:6,1:5:8.42:44,0,8	0/0:4,0:3:2.88:0,3,15
chr10	63171722	.	C	CAG	233.56	PASS	AB=0.997;AC=15;AF=0.278;AN=54;BaseQRankSum=1.704;DP=346;FS=0.000;HRun=0;HaplotypeScore=59.4651;InbreedingCoeff=0.0946;MQ=51.55;MQ0=22;MQRankSum=0.056;QD=1.44;ReadPosRankSum=-1.380;VQSLOD=1.2733;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:25:26.27:0,26,319	0/1:2,0:2:0:0,0,0	0/0:35,0:9:20.82:0,21,193	0/0:26,0:5:11.92:0,12,104	0/0:11,0:10:15.05:0,15,220	0/0:9,0:9:8.78:0,9,65	0/1:24,1:24:15.83:16,0,138	0/0:9,0:8:14.89:0,15,68	0/1:8,0:8:4.98:46,0,5	0/1:9,0:7:0.07:0,0,32	0/0:6,0:6:5.94:0,6,41	0/0:10,0:10:14.83:0,15,103	0/0:7,0:7:6.26:0,6,37	0/0:11,0:11:2.94:0,3,21	0/1:12,0:12:10.61:11,0,77	0/0:5,0:5:5.65:0,6,32	0/1:14,0:13:12.47:61,0,12	0/1:12,0:11:8.10:8,0,55	0/0:10,0:8:7.37:0,7,36	0/0:8,0:6:5.95:0,6,45	1/1:15,23:39:9.34:149,9,0	0/1:10,0:10:0:0,0,0	./.	0/1:10,0:10:13.77:14,0,15	0/1:4,0:4:0.03:0,0,0	0/1:12,0:12:7.67:55,0,8	0/0:6,0:6:4.61:0,5,21	1/1:4,0:3:0.89:2,1,0
chr10	63171763	.	A	ATCAT	457.75	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=1.642;DP=464;FS=1.100;HRun=0;HaplotypeScore=96.6758;InbreedingCoeff=0.5753;MQ=65.11;MQ0=18;MQRankSum=-3.206;QD=19.90;ReadPosRankSum=0.343;VQSLOD=3.4370;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:39.12:0,39,759	0/0:2,0:2:6.02:0,6,124	0/0:21,0:12:30.54:0,31,527	0/0:49,0:23:28.58:0,29,896	0/0:19,0:19:41.66:0,42,848	0/0:13,0:13:24.55:0,25,487	0/0:28,0:27:66.22:0,66,1284	0/0:31,0:28:68.21:0,68,892	1/1:4,9:14:24.08:549,24,0	0/0:9,0:9:24.47:0,24,455	0/0:9,0:9:21.07:0,21,436	0/0:15,0:15:22.82:0,23,496	0/0:11,0:11:18.09:0,18,324	0/0:10,0:10:18.06:0,18,371	0/0:14,0:14:33.11:0,33,667	0/1:9,0:9:10.16:10,0,373	0/0:21,0:19:36.05:0,36,682	0/0:18,0:17:39:0,39,729	0/0:11,0:11:31.33:0,31,525	0/0:13,0:13:20.86:0,21,415	0/0:53,0:53:87.28:0,87,1676	0/0:10,0:10:18.05:0,18,337	0/0:7,0:7:15.05:0,15,301	0/0:13,0:13:15.05:0,15,310	0/0:6,0:6:12.04:0,12,231	0/0:10,0:10:30.07:0,30,471	0/0:12,0:11:33.11:0,33,634	0/0:11,0:10:19.81:0,20,364
chr10	63172772	.	GATGTGTGTGTGT	G	5180.32	PASS	AB=0.843;AC=33;AF=0.589;AN=56;BaseQRankSum=12.662;DP=547;FS=0.000;HRun=0;HaplotypeScore=194.0231;InbreedingCoeff=0.6682;MQ=72.15;MQ0=5;MQRankSum=-0.542;QD=15.56;ReadPosRankSum=3.080;VQSLOD=3.4883;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:60.92:0,61,1823	0/0:3,0:3:5.99:0,6,50	0/0:30,0:20:50.46:0,50,510	0/0:35,0:25:64.90:0,65,603	0/0:11,0:10:29.89:0,30,720	1/1:11,0:11:29.70:229,30,0	1/1:33,0:32:68.11:574,68,0	0/0:25,0:25:75.03:0,75,683	0/0:23,0:23:59.61:0,60,1222	1/1:0,0:8:14.99:142,15,0	1/1:0,0:4:2.97:20,3,0	1/1:0,22:23:10.82:344,11,0	1/1:13,0:13:38.94:335,39,0	1/1:17,0:17:41.91:349,42,0	1/1:1,22:23:8.73:276,9,0	1/1:1,18:19:1.90:115,2,0	0/1:26,0:26:99:216,0,192	0/1:16,0:16:19.10:19,0,337	1/1:1,0:22:65.67:505,66,0	1/1:0,11:11:8.90:156,9,0	1/1:41,0:40:76.90:677,77,0	0/0:15,0:15:33.03:0,33,832	0/0:11,0:15:17.93:0,18,402	0/0:28,0:28:75.01:0,75,1923	1/1:0,19:19:3.01:116,3,0	1/1:1,23:25:59.36:710,59,0	1/1:12,0:12:35.90:292,36,0	0/1:1,8:9:12.98:107,0,13
chr10	63172773	.	ATGTGTGTGTGTGTGTGTGTG	A	677.22	PASS	AB=0.972;AC=6;AF=0.115;AN=52;BaseQRankSum=2.189;DP=565;FS=14.119;HRun=0;HaplotypeScore=274.2907;InbreedingCoeff=0.3274;MQ=70.24;MQ0=5;MQRankSum=-3.631;QD=7.44;ReadPosRankSum=0.521;VQSLOD=1.1133;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:33.11:0,33,2902	./.	0/0:29,0:19:1.82:0,2,5	0/0:35,0:25:3.01:0,3,40	0/0:11,0:10:15.04:0,15,963	0/0:11,0:11:12.04:0,12,315	0/0:34,0:33:36.96:0,37,1000	1/1:25,0:25:5.95:42,6,0	0/0:23,0:23:33.55:0,34,1794	0/0:8,0:8:10.74:0,11,216	./.	0/1:23,0:23:5.47:5,0,41	0/0:13,0:13:27.08:0,27,770	0/0:17,0:17:12.02:0,12,248	0/0:24,0:24:9.47:0,9,93	0/0:19,0:19:4.35:0,4,27	1/1:13,11:26:11.71:596,12,0	0/1:16,0:17:99:149,0,144	0/0:23,0:22:12.04:0,12,252	0/0:11,0:11:2.67:0,3,25	0/0:42,0:41:24.52:0,25,504	0/0:19,0:19:14.75:0,15,1223	0/0:16,0:15:11.42:0,11,705	0/0:29,0:30:39.10:0,39,2670	0/0:19,0:19:2.99:0,3,24	0/0:27,0:27:3.13:0,3,235	0/0:12,0:12:18.06:0,18,450	0/0:9,0:9:2.98:0,3,22
chr10	63174839	.	AC	A	898.30	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-0.522;DP=743;FS=0.737;HRun=2;HaplotypeScore=116.3526;InbreedingCoeff=1.0000;MQ=74.61;MQ0=1;MQRankSum=-3.206;QD=29.94;ReadPosRankSum=1.628;VQSLOD=3.3854;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:96.30:0,96,1415	0/0:16,0:16:48.14:0,48,680	0/0:27,0:27:75.18:0,75,1055	0/0:23,0:22:60.16:0,60,849	0/0:32,0:32:96.29:0,96,1397	0/0:30,0:30:90.29:0,90,1328	0/0:28,0:28:84.28:0,84,1257	0/0:30,0:30:90.30:0,90,1330	1/1:2,28:30:78.21:993,78,0	0/0:28,0:28:84.27:0,84,1221	0/0:24,0:24:72.22:0,72,1041	0/0:23,0:23:69.22:0,69,1013	0/0:33,0:33:96.18:0,96,1388	0/0:20,0:20:60.19:0,60,877	0/0:29,0:29:81.26:0,81,1191	0/0:24,0:24:72.24:0,72,1059	0/0:20,0:20:57.19:0,57,854	0/0:22,0:22:63.17:0,63,913	0/0:27,0:26:75.23:0,75,1079	0/0:27,0:27:81.21:0,81,1167	0/0:27,0:27:81.27:0,81,1214	0/0:21,0:21:63.21:0,63,943	0/0:24,0:24:69.20:0,69,973	0/0:27,0:27:81.21:0,81,1164	0/0:34,0:34:99:0,102,1524	0/0:30,0:30:87.29:0,87,1291	0/0:39,0:38:99:0,117,1734	0/0:16,0:16:48.16:0,48,719
chr10	63176106	.	T	TCCTGTGTCC	9122.07	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-6.356;DP=667;FS=27.030;HRun=0;HaplotypeScore=181.5002;InbreedingCoeff=0.9815;MQ=86.67;MQ0=0;MQRankSum=-12.150;QD=77.97;ReadPosRankSum=-1.872;VQSLOD=3.1399;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,114,3186	1/1:1,6:8:18.06:757,18,0	0/0:27,0:27:60.04:0,60,1495	0/0:22,0:22:53.83:0,54,1362	0/0:24,0:24:72.23:0,72,2001	0/0:24,0:24:69.20:0,69,1819	0/0:37,0:37:99:0,108,2925	1/1:8,15:31:78.16:2899,78,0	0/0:27,0:27:78.21:0,78,2088	0/0:25,0:25:66.17:0,66,1712	0/0:20,0:20:51.17:0,51,1452	0/0:27,0:27:78.27:0,78,2346	0/0:23,0:23:60.19:0,60,1749	0/0:27,0:27:75.26:0,75,2172	0/0:24,0:24:63.22:0,63,1752	0/0:32,0:32:93.30:0,93,2639	1/1:3,17:24:51.17:2345,51,0	1/1:6,6:15:33.01:1195,33,0	0/0:17,0:17:48.15:0,48,1216	0/0:23,0:23:63.20:0,63,1795	0/0:42,0:42:99:0,114,3096	1/1:2,6:10:12.04:577,12,0	1/1:4,4:10:8.82:261,9,0	1/1:4,12:18:27.56:1088,28,0	0/0:17,0:17:48.16:0,48,1449	0/0:26,0:26:72.24:0,72,1965	0/0:29,0:28:81.26:0,81,2301	0/0:15,0:15:45.15:0,45,1342
chr10	63176324	.	A	AT	653.99	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=0.163;DP=529;FS=11.822;HRun=2;HaplotypeScore=107.1762;InbreedingCoeff=0.9417;MQ=71.57;MQ0=3;MQRankSum=-8.126;QD=9.91;ReadPosRankSum=-5.243;VQSLOD=-0.7266;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:68.79:0,69,546	1/1:4,0:4:8.97:73,9,0	0/0:35,0:18:32.74:0,33,348	0/0:36,0:25:46.32:0,46,376	0/0:19,0:19:47.84:0,48,389	0/0:20,0:21:53.79:0,54,433	0/0:19,0:19:39.79:0,40,321	1/1:13,0:13:32.80:245,33,0	0/0:24,0:24:62.97:0,63,602	0/0:28,0:28:73.31:0,73,628	0/0:17,0:17:41.18:0,41,308	0/0:16,0:16:44.54:0,45,348	0/0:19,0:19:53.94:0,54,452	0/0:14,0:14:35.57:0,36,281	0/0:29,0:29:77.56:0,78,626	0/0:25,0:25:65.86:0,66,546	1/1:5,0:5:11.84:78,12,0	1/1:4,0:4:5.95:42,6,0	0/0:18,0:18:41.73:0,42,327	0/0:16,0:16:44.35:0,44,335	0/0:22,0:22:53.91:0,54,445	1/1:8,4:12:23.73:158,24,0	1/1:13,6:19:29.65:203,30,0	1/1:7,2:9:5.93:40,6,0	0/0:20,0:20:53.94:0,54,457	0/0:26,0:26:65.25:0,65,511	0/0:25,0:25:62.81:0,63,512	0/0:9,0:9:20.49:0,20,175
chr10	63176326	.	TC	T	3754.34	PASS	AB=0.817;AC=36;AF=0.783;AN=46;BaseQRankSum=-4.611;DP=518;FS=13.935;HRun=13;HaplotypeScore=93.1417;InbreedingCoeff=0.5306;MQ=71.37;MQ0=6;MQRankSum=0.162;QD=9.48;ReadPosRankSum=1.840;VQSLOD=1.4039;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:26:21.95:69,22,0	0/0:4,0:4:0:0,0,0	0/1:36,3:18:39.63:40,0,61	0/0:35,0:24:17.08:0,17,139	0/1:11,0:19:12.91:13,0,17	1/1:7,13:20:37.80:267,38,0	1/1:4,13:18:34.83:238,35,0	0/0:12,0:12:0:0,0,0	0/0:19,0:21:3.45:0,3,73	1/1:12,15:27:35.40:251,35,0	1/1:3,12:17:31.55:210,32,0	1/1:6,9:15:21.31:154,21,0	1/1:8,9:20:28.28:190,28,0	1/1:6,8:14:15.80:110,16,0	1/1:7,20:27:48.16:350,48,0	1/1:6,14:22:43.29:296,43,0	./.	./.	1/1:5,10:16:32.22:221,32,0	1/1:7,8:16:25.86:180,26,0	1/1:6,13:22:32.92:214,33,0	./.	./.	./.	1/1:5,15:20:39.23:285,39,0	1/1:10,12:24:37.61:255,38,0	1/1:6,17:23:45.17:327,45,0	1/1:5,5:9:11.50:87,12,0
chr10	63176328	.	C	CTCTCTCTCTCTCT	1216.25	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=3.909;DP=521;FS=28.150;HRun=0;HaplotypeScore=243.2409;InbreedingCoeff=0.7395;MQ=70.96;MQ0=7;MQRankSum=-5.149;QD=24.32;ReadPosRankSum=-0.985;VQSLOD=1.3698;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:67.41:0,67,2226	1/1:3,0:3:6.02:91,6,0	0/0:42,0:17:45.29:0,45,1253	0/0:40,0:26:42.69:0,43,1156	0/0:18,0:18:45.15:0,45,1341	0/0:23,0:22:57.03:0,57,1705	0/0:18,0:18:45.15:0,45,1457	1/1:12,0:12:17.75:847,18,0	0/0:19,0:19:57.18:0,57,1887	0/0:27,0:27:81.27:0,81,2279	0/0:17,0:17:41.85:0,42,1351	0/0:15,0:15:45.15:0,45,1522	0/0:19,0:19:51.18:0,51,1628	0/0:13,0:13:33.07:0,33,1000	0/0:27,0:27:75.21:0,75,2219	0/0:21,0:21:63.22:0,63,2011	1/1:4,0:4:8.92:168,9,0	0/1:4,0:4:11.89:147,0,12	0/0:14,0:14:39.13:0,39,1196	0/0:16,0:16:42.14:0,42,1343	0/0:25,0:25:54.19:0,54,1805	0/0:8,4:12:5.87:0,6,36	1/1:12,4:18:2.21:7,2,0	1/1:7,2:9:3.01:105,3,0	0/0:20,0:20:54.18:0,54,1667	0/0:27,0:27:66.63:0,67,1932	0/0:22,0:22:63.21:0,63,2031	0/0:10,0:9:21.53:0,22,649
chr10	63176780	.	AT	A	10834.70	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=6.630;DP=606;FS=15.653;HRun=8;HaplotypeScore=65.6380;InbreedingCoeff=0.9842;MQ=71.80;MQ0=0;MQRankSum=-3.492;QD=22.95;ReadPosRankSum=2.648;VQSLOD=4.1012;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,129,1524	1/1:1,9:10:24.04:232,24,0	0/0:15,0:13:23.28:0,23,266	0/0:22,0:21:33.48:0,33,477	0/0:24,1:25:43.24:0,43,804	1/1:2,16:18:42.07:406,42,0	1/1:3,15:18:39.06:377,39,0	1/1:4,28:32:84.13:811,84,0	0/0:22,0:22:54.17:0,54,652	1/1:1,10:11:30.05:289,30,0	1/1:3,10:13:30.04:288,30,0	1/1:1,15:16:42.07:406,42,0	1/1:3,9:12:21.03:203,21,0	1/1:2,19:21:42.07:406,42,0	1/1:5,19:24:54.08:521,54,0	1/1:6,12:18:36.05:348,36,0	1/1:1,37:38:99:985,102,0	1/1:2,15:17:45.07:434,45,0	1/1:3,17:20:48.05:458,48,0	1/1:2,21:23:63.10:606,63,0	1/1:0,17:17:39.06:377,39,0	1/1:6,20:26:47.81:445,48,0	1/1:0,27:27:78.13:753,78,0	1/1:2,23:25:66.10:637,66,0	1/1:1,23:24:60.10:579,60,0	1/1:8,26:34:78.11:753,78,0	1/1:4,18:22:45.07:435,45,0	1/1:3,3:6:9.01:87,9,0
chr10	63176931	.	A	ACC	3567.25	PASS	AB=0.636;AC=13;AF=0.232;AN=56;BaseQRankSum=-1.746;DP=555;FS=13.638;HRun=0;HaplotypeScore=169.1209;InbreedingCoeff=0.8998;MQ=74.56;MQ0=0;MQRankSum=-6.590;QD=30.75;ReadPosRankSum=0.932;VQSLOD=4.7996;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:93.28:0,93,1441	0/1:3,4:7:18.88:227,0,19	0/0:34,0:27:63.30:0,63,827	0/0:29,0:22:31.24:0,31,693	0/0:21,0:21:63.21:0,63,1007	0/0:20,0:20:48.16:0,48,783	0/0:19,0:19:51.14:0,51,745	1/1:18,13:32:62.75:869,63,0	0/0:22,0:22:66.18:0,66,1044	0/0:35,0:34:99:0,102,1612	0/0:20,0:20:57.19:0,57,918	0/0:20,0:20:48.14:0,48,719	0/0:9,0:9:24.08:0,24,382	0/0:14,0:14:42.14:0,42,644	0/0:18,0:18:47.83:0,48,773	0/0:21,0:21:63.18:0,63,966	1/1:1,23:24:51.13:793,51,0	1/1:4,6:10:26.15:339,26,0	0/0:15,0:15:45.15:0,45,703	0/0:18,0:18:54.17:0,54,826	0/0:10,0:10:27.09:0,27,440	1/1:1,13:15:30.01:429,30,0	1/1:0,10:10:30.10:478,30,0	1/1:2,13:18:29.99:433,30,0	0/0:17,0:17:42.13:0,42,658	0/0:26,0:26:78.26:0,78,1222	0/0:31,0:31:81.27:0,81,1286	0/0:9,0:9:27.09:0,27,418
chr10	63176944	.	T	TAAA	15036.93	PASS	AB=0.909;AC=33;AF=0.589;AN=56;BaseQRankSum=-3.202;DP=583;FS=6.402;HRun=0;HaplotypeScore=152.5910;InbreedingCoeff=0.9206;MQ=73.13;MQ0=1;MQRankSum=-1.771;QD=47.44;ReadPosRankSum=1.125;VQSLOD=6.7711;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:81.27:0,81,1475	0/1:9,1:10:40.91:41,0,65	0/0:40,0:33:60.05:0,60,949	0/0:27,0:21:40.40:0,40,484	0/0:24,0:24:72.23:0,72,1272	1/1:1,21:24:48.16:994,48,0	1/1:0,12:13:33.11:688,33,0	0/0:37,0:37:34.67:0,35,336	0/0:21,0:21:63.14:0,63,1048	1/1:3,28:32:87.66:1645,88,0	1/1:2,18:21:49.18:839,49,0	1/1:3,17:24:51.17:1030,51,0	1/1:3,7:10:25.36:511,25,0	1/1:8,8:16:42.58:824,43,0	1/1:1,17:19:45.15:940,45,0	1/1:2,18:20:57.17:1143,57,0	0/0:26,0:26:34.54:0,35,170	0/0:9,0:9:15.23:0,15,61	1/1:2,9:9:27.09:553,27,0	1/1:3,12:15:36.12:750,36,0	1/1:1,9:11:27.04:493,27,0	0/0:16,0:16:15.70:0,16,79	0/0:18,0:18:33.51:0,34,146	0/0:15,0:15:25.18:0,25,97	1/1:3,16:19:48.16:978,48,0	1/1:2,28:30:64.93:1684,65,0	1/1:3,28:32:71.18:1483,71,0	1/1:2,7:9:20.62:440,21,0
chr10	63176945	.	T	TAAAA	18528.44	PASS	AB=0.982;AC=46;AF=0.821;AN=56;BaseQRankSum=6.728;DP=589;FS=0.792;HRun=3;HaplotypeScore=157.1627;InbreedingCoeff=0.7582;MQ=72.11;MQ0=1;MQRankSum=-8.332;QD=39.26;ReadPosRankSum=0.946;VQSLOD=2.5624;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:84.26:0,84,1451	1/1:10,0:10:6.48:114,6,0	0/0:40,0:34:68.77:0,69,1005	0/1:26,0:21:34.84:35,0,377	0/0:24,0:24:72.23:0,72,1244	1/1:24,0:24:51.18:1068,51,0	1/1:13,0:13:36.12:748,36,0	0/1:35,0:35:4.31:348,0,4	0/0:20,0:20:54.18:0,54,965	1/1:33,0:32:92.11:1814,92,0	1/1:20,0:20:51.61:1053,52,0	1/1:18,1:20:54.17:1060,54,0	1/1:13,1:14:36.12:770,36,0	1/1:14,2:16:46.68:927,47,0	1/1:18,0:18:48.16:989,48,0	1/1:24,0:24:69.24:1402,69,0	1/1:26,0:26:24.37:216,24,0	1/1:9,0:9:17.63:79,18,0	1/1:13,1:12:33.11:695,33,0	1/1:17,0:17:48.16:913,48,0	1/1:12,0:12:27.09:560,27,0	1/1:15,0:15:29.62:148,30,0	1/1:18,0:18:13.36:120,13,0	1/1:15,0:15:29.77:151,30,0	1/1:18,3:21:57.20:1248,57,0	1/1:29,0:29:87.29:1783,87,0	1/1:32,0:32:87.28:1723,87,0	1/1:10,0:10:30.08:567,30,0
chr10	63177166	.	T	TTG	700.37	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-4.247;DP=749;FS=0.000;HRun=0;HaplotypeScore=103.7562;InbreedingCoeff=0.9570;MQ=71.61;MQ0=2;MQRankSum=0.444;QD=28.01;ReadPosRankSum=0.792;VQSLOD=4.4226;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:55:92.85:0,93,1560	0/0:10,0:11:29.92:0,30,344	0/0:34,0:25:11.93:0,12,367	0/0:39,0:35:52.22:0,52,637	0/0:20,0:20:42.12:0,42,501	0/0:27,0:27:63.15:0,63,753	0/0:19,0:19:24.59:0,25,446	0/0:40,0:40:90.25:0,90,1059	1/1:6,19:25:17.52:791,18,0	0/0:25,0:25:51.16:0,51,623	0/0:23,0:23:51.08:0,51,590	0/0:22,0:22:57.14:0,57,678	0/0:23,0:24:66.02:0,66,771	0/0:24,0:24:51.15:0,51,613	0/0:14,0:14:36.03:0,36,406	0/0:25,0:25:69.15:0,69,806	0/0:31,0:31:87.23:0,87,1026	0/0:29,0:29:75.20:0,75,891	0/0:15,0:15:27.08:0,27,330	0/0:20,0:20:39.12:0,39,476	0/0:42,0:41:75.23:0,75,917	0/0:14,0:14:36.10:0,36,427	0/0:22,0:22:45.14:0,45,550	0/0:49,0:49:99:0,123,1486	0/0:22,0:22:39.12:0,39,476	0/0:28,0:28:60.16:0,60,711	0/0:30,0:30:48.10:0,48,570	0/0:19,0:19:45.14:0,45,548
chr10	63177443	.	TAGG	T	14810.09	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=16.154;DP=658;FS=1.714;HRun=0;HaplotypeScore=106.4795;InbreedingCoeff=0.9985;MQ=78.88;MQ0=0;MQRankSum=-5.369;QD=40.35;ReadPosRankSum=2.957;VQSLOD=6.3072;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:56:99:0,156,3414	0/0:7,0:7:18.06:0,18,402	0/0:16,0:16:24.03:0,24,709	0/0:20,0:20:48.85:0,49,865	0/0:27,0:27:81.28:0,81,1775	1/1:0,18:18:51.17:833,51,0	1/1:3,39:42:99:1604,99,0	0/0:26,0:26:72.24:0,72,1559	0/0:17,0:17:51.18:0,51,1132	1/1:3,23:26:69.19:1049,69,0	1/1:0,18:18:45.11:706,45,0	1/1:0,20:20:57.19:931,57,0	1/1:0,20:20:54.14:853,54,0	1/1:1,25:26:66.14:1019,66,0	1/1:2,11:13:33.07:510,33,0	1/1:1,11:12:30.07:462,30,0	0/0:33,0:33:93.29:0,93,2032	0/0:20,0:20:54.19:0,54,1206	1/1:2,16:18:48.16:783,48,0	1/1:3,30:33:78.14:1176,78,0	1/1:2,18:20:51:717,51,0	0/0:16,0:16:45.15:0,45,997	0/0:25,0:25:72.25:0,72,1594	0/0:28,0:28:81.28:0,81,1810	1/1:1,20:21:54.10:824,54,0	1/1:2,30:32:90.31:1462,90,0	1/1:2,23:25:51.17:833,51,0	1/1:1,22:23:66.18:1049,66,0
chr10	63177931	.	C	CAT	9461.36	PASS	AB=1.000;AC=35;AF=0.625;AN=56;BaseQRankSum=8.608;DP=761;FS=1.978;HRun=0;HaplotypeScore=136.5357;InbreedingCoeff=0.7730;MQ=48.77;MQ0=49;MQRankSum=0.764;QD=17.99;ReadPosRankSum=7.895;VQSLOD=4.7233;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:42:95.92:0,96,976	0/1:8,0:8:5.66:6,0,38	0/0:39,0:13:32.87:0,33,269	0/0:31,0:14:30.04:0,30,306	0/0:13,0:13:36.01:0,36,396	1/1:18,6:20:12.02:438,12,0	1/1:21,11:31:47.50:690,48,0	0/0:29,0:29:20.15:0,20,469	0/0:21,0:21:29.84:0,30,231	1/1:17,9:25:50.20:679,50,0	1/1:12,9:20:35.86:491,36,0	1/1:19,8:23:28.76:470,29,0	1/1:20,12:31:38.35:836,38,0	1/1:20,10:29:10.98:506,11,0	1/1:18,13:29:47.73:678,48,0	1/1:18,15:27:30.52:838,31,0	0/1:34,0:33:19.46:19,0,276	0/0:17,0:16:29.25:0,29,216	1/1:15,1:14:7.16:239,7,0	1/1:15,7:20:26.21:478,26,0	1/1:54,11:55:23.54:617,24,0	0/0:25,0:25:19.70:0,20,272	0/0:17,0:15:22.30:0,22,170	0/1:21,0:18:7.50:7,0,120	1/1:14,8:18:33.06:448,33,0	1/1:25,13:34:71.87:1058,72,0	1/1:12,13:22:55.38:772,55,0	1/1:13,3:10:12.04:190,12,0
chr10	63177946	.	A	AC	9237.86	PASS	AB=1.000;AC=34;AF=0.607;AN=56;BaseQRankSum=10.199;DP=686;FS=59.279;HRun=1;HaplotypeScore=110.9584;InbreedingCoeff=0.8318;MQ=63.21;MQ0=56;MQRankSum=-0.609;QD=18.70;ReadPosRankSum=5.059;VQSLOD=1.4979;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:35:81.20:0,81,1024	0/0:9,0:9:20.34:0,20,224	0/0:29,0:15:42.14:0,42,556	0/0:27,0:20:57.13:0,57,713	0/0:12,0:12:36.11:0,36,475	1/1:10,13:17:48.14:615,48,0	1/1:0,25:22:36.10:443,36,0	0/1:21,0:24:47.08:47,0,640	0/0:17,0:17:33.01:0,33,385	1/1:1,22:22:50.43:624,50,0	1/1:0,18:17:30.09:381,30,0	1/1:9,14:18:42.03:526,42,0	1/1:12,19:26:69.13:869,69,0	1/1:1,30:29:42.13:577,42,0	1/1:1,29:27:45.14:589,45,0	1/1:8,22:23:62.99:809,63,0	0/1:21,0:21:22.19:22,0,466	0/0:15,0:15:38.86:0,39,518	1/1:3,17:17:42.06:508,42,0	1/1:0,23:21:33.11:473,33,0	1/1:7,53:48:34.63:446,35,0	0/0:19,0:19:15.49:0,15,487	0/0:10,0:10:23.76:0,24,260	0/0:17,0:15:7.73:0,8,282	1/1:2,22:20:27.08:351,27,0	1/1:1,39:36:87.23:1132,87,0	1/1:8,15:19:54.06:663,54,0	1/1:6,19:17:12.04:162,12,0
chr10	63178203	.	TGGGCTGGCAG	T	13789.93	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=15.236;DP=536;FS=4.061;HRun=0;HaplotypeScore=180.9610;InbreedingCoeff=0.9460;MQ=85.07;MQ0=0;MQRankSum=-13.632;QD=48.56;ReadPosRankSum=2.491;VQSLOD=4.6523;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:75.26:0,75,2924	0/0:7,0:7:18.05:0,18,635	0/0:15,0:15:27.09:0,27,1090	0/0:27,0:27:44.69:0,45,1268	0/0:20,0:20:33.08:0,33,1214	1/1:0,8:8:12.04:376,12,0	1/1:5,25:30:63.22:1938,63,0	0/0:24,0:24:42.13:0,42,1682	0/0:25,0:25:66.11:0,66,2997	1/1:7,13:20:30.06:783,30,0	1/1:1,6:7:3.01:84,3,0	1/1:3,21:24:51.65:1588,52,0	1/1:2,12:14:36.12:1114,36,0	1/1:6,14:20:39.13:1217,39,0	1/1:1,22:23:60.21:1880,60,0	1/1:2,13:15:30.10:933,30,0	0/0:30,0:30:78.24:0,78,3748	0/0:22,0:22:57.15:0,57,2545	1/1:5,13:18:38.92:632,39,0	1/1:4,8:12:12.04:341,12,0	1/1:7,16:23:14.07:488,14,0	0/0:12,0:12:24.06:0,24,611	0/0:10,0:10:27.05:0,27,645	0/0:27,0:27:75.22:0,75,3242	1/1:3,5:8:6.02:188,6,0	1/1:13,13:26:32.96:655,33,0	1/1:9,20:27:36.12:1102,36,0	1/1:0,7:7:15.05:470,15,0
chr10	63178731	.	TTC	T	2666.67	PASS	AB=1.000;AC=18;AF=0.321;AN=56;BaseQRankSum=-1.237;DP=604;FS=8.876;HRun=0;HaplotypeScore=113.0708;InbreedingCoeff=0.8211;MQ=53.95;MQ0=8;MQRankSum=1.029;QD=14.34;ReadPosRankSum=-3.971;VQSLOD=2.2634;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:50:81.70:0,82,1192	1/1:8,1:8:9.60:186,10,0	0/0:13,0:4:4.13:0,4,19	0/1:14,0:9:18.83:19,0,84	0/0:35,0:34:50.15:0,50,728	0/1:15,0:15:3.70:4,0,127	0/0:18,0:16:29.76:0,30,298	1/1:22,1:23:51.41:406,51,0	1/1:13,1:14:34.89:277,35,0	0/0:33,0:32:61.33:0,61,592	0/0:18,0:18:44.11:0,44,498	0/0:29,0:29:51.27:0,51,624	0/0:16,0:16:31.98:0,32,337	0/0:24,0:24:45.46:0,45,416	0/0:26,0:26:44.63:0,45,453	0/0:23,0:23:32.80:0,33,431	1/1:29,8:35:51.51:536,52,0	1/1:22,2:23:37.46:414,37,0	0/0:34,0:34:65.97:0,66,676	0/0:20,0:18:32.04:0,32,382	0/0:7,0:6:9.87:0,10,70	1/1:13,6:19:40.13:437,40,0	1/1:9,2:10:26.71:251,27,0	1/1:2,18:20:24.07:342,24,0	0/0:17,0:17:24.88:0,25,285	0/0:21,0:20:32.98:0,33,461	0/0:24,0:24:47.87:0,48,466	0/0:8,0:8:18.45:0,18,135
chr10	63178732	.	TC	T	2637.77	PASS	AB=0.964;AC=18;AF=0.321;AN=56;BaseQRankSum=0.090;DP=604;FS=10.926;HRun=1;HaplotypeScore=105.9505;InbreedingCoeff=0.7967;MQ=53.56;MQ0=9;MQRankSum=-0.503;QD=14.41;ReadPosRankSum=-4.198;VQSLOD=1.2294;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:52:81.21:0,81,932	1/1:5,4:8:20.82:220,21,0	0/0:12,1:4:2.77:0,3,7	0/1:12,1:8:19.75:20,0,79	0/0:36,0:35:33.98:0,34,495	0/1:15,0:15:4.77:5,0,72	0/0:18,0:16:25.81:0,26,214	1/1:3,19:22:54.50:478,55,0	1/1:13,1:14:35.85:294,36,0	0/0:33,0:32:44.06:0,44,404	0/0:18,0:18:36.19:0,36,365	0/0:28,0:28:23.23:0,23,439	0/0:16,0:16:27.40:0,27,226	0/0:24,0:24:37.36:0,37,297	0/0:26,0:26:40.25:0,40,348	0/0:23,0:23:3.75:0,4,254	1/1:11,24:33:53.94:595,54,0	1/1:20,5:23:47.90:433,48,0	0/0:34,0:34:33.43:0,33,484	0/0:21,0:19:28.41:0,28,253	0/0:6,0:5:7.88:0,8,61	1/1:19,0:19:38.76:328,39,0	1/1:11,0:10:28.19:220,28,0	1/1:18,2:20:24.05:248,24,0	0/0:18,0:18:31.78:0,32,233	0/0:20,0:19:32.13:0,32,338	0/0:25,0:25:30.91:0,31,298	0/0:8,0:8:16.39:0,16,117
chr10	63178738	.	T	TC	2313.84	PASS	AB=0.802;AC=18;AF=0.321;AN=56;BaseQRankSum=-0.605;DP=590;FS=1.600;HRun=0;HaplotypeScore=105.8179;InbreedingCoeff=-0.1547;MQ=49.06;MQ0=10;MQRankSum=-5.573;QD=7.19;ReadPosRankSum=5.750;VQSLOD=3.6113;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:52:99:0,132,1400	0/0:10,0:9:23.83:0,24,204	0/0:11,0:2:2.94:0,3,18	0/0:9,0:5:6.24:0,6,90	0/0:38,0:37:92.56:0,93,897	0/1:5,12:17:47.96:48,0,82	1/1:12,5:15:2.63:108,3,0	0/0:24,0:24:59.72:0,60,472	0/0:12,0:12:29.59:0,30,243	0/1:20,9:28:52.61:262,0,53	0/1:13,4:17:78.74:167,0,79	0/1:20,4:24:99:194,0,103	0/1:12,4:16:8.57:162,0,9	0/1:15,7:23:10.25:138,0,10	1/1:19,4:23:29.07:183,29,0	0/1:15,8:23:5.67:160,0,6	0/0:36,0:34:66.56:0,67,563	0/0:22,0:20:43.61:0,44,359	0/1:29,5:34:76.33:366,0,76	0/1:19,4:21:63.71:134,0,64	0/1:5,1:5:10.43:55,0,10	0/0:18,0:18:41.12:0,41,335	0/0:14,0:13:23.34:0,23,171	0/0:20,0:20:27:0,27,251	0/1:11,5:16:75.95:87,0,76	0/1:21,2:22:97.61:221,0,98	0/1:19,5:24:36.40:169,0,36	0/1:5,1:6:24.30:24,0,62
chr10	63178748	.	T	TTTTTC	8421.98	PASS	AB=0.952;AC=42;AF=0.750;AN=56;BaseQRankSum=-2.517;DP=494;FS=10.548;HRun=0;HaplotypeScore=102.7623;InbreedingCoeff=0.2886;MQ=47.19;MQ0=12;MQRankSum=-8.043;QD=20.95;ReadPosRankSum=-3.566;VQSLOD=2.8520;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:42:86.56:0,87,1128	0/1:9,0:9:20.83:91,0,21	0/0:8,0:2:3:0,3,25	0/0:4,0:1:0.47:0,0,1	0/0:35,0:34:23.62:0,24,787	1/1:7,3:12:29.63:506,30,0	1/1:9,3:12:20.59:301,21,0	0/1:13,0:14:15.17:105,0,15	0/1:6,0:6:30.29:30,0,61	1/1:18,5:26:57.82:1006,58,0	1/1:11,1:16:34.11:422,34,0	1/1:11,3:15:37.64:534,38,0	1/1:7,2:11:26.41:360,26,0	1/1:14,5:22:39.57:663,40,0	1/1:14,2:17:12.03:237,12,0	1/1:9,8:18:37.51:776,38,0	0/1:28,0:27:74.56:81,0,75	0/1:16,0:16:10.57:196,0,11	1/1:16,4:20:18.66:529,19,0	1/1:18,4:22:41.27:555,41,0	1/1:9,1:8:6.48:66,6,0	1/1:15,0:19:10.89:241,11,0	1/1:2,0:12:4.41:49,4,0	0/1:19,0:19:40.21:75,0,40	1/1:14,2:18:16.12:381,16,0	1/1:19,2:20:40.20:347,40,0	1/1:15,4:21:30.44:653,30,0	1/1:7,1:7:18.01:218,18,0
chr10	63179124	.	T	TG	3432.11	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-6.102;DP=781;FS=3.278;HRun=1;HaplotypeScore=86.9773;InbreedingCoeff=0.8908;MQ=52.06;MQ0=33;MQRankSum=4.232;QD=37.31;ReadPosRankSum=0.082;VQSLOD=3.9509;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:39:99:0,105,1337	0/0:21,0:17:48.16:0,48,623	0/0:23,0:1:2.60:0,3,10	0/0:25,0:2:2.37:0,2,8	0/0:36,0:33:84.27:0,84,1075	0/0:25,0:23:57.19:0,57,739	0/0:23,0:18:48.16:0,48,623	0/0:29,0:23:69.22:0,69,894	0/0:24,0:24:57.18:0,57,738	0/0:33,0:30:90.29:0,90,1164	0/0:21,0:20:57.18:0,57,736	0/0:26,0:23:57.18:0,57,732	0/0:24,0:23:60.12:0,60,752	0/0:32,0:31:81.26:0,81,1051	0/0:46,0:41:99:0,102,1319	0/0:34,0:33:84.26:0,84,1074	0/0:32,0:32:87.28:0,87,1129	0/0:23,0:21:51.17:0,51,661	0/0:24,0:16:45.11:0,45,551	0/0:37,0:33:96.30:0,96,1228	0/0:24,0:23:63.05:0,63,769	1/1:1,30:31:81.27:1202,81,0	1/1:2,33:32:81.26:1146,81,0	1/1:2,24:26:75.23:1085,75,0	0/0:17,0:16:30.09:0,30,381	0/0:29,0:26:75.24:0,75,970	0/0:26,0:26:66.15:0,66,832	0/0:13,0:13:39.10:0,39,475
chr10	63179194	.	TG	T	19775.71	PASS	AC=52;AF=0.963;AN=54;BaseQRankSum=-1.726;DP=680;FS=3.870;HRun=4;HaplotypeScore=76.6298;InbreedingCoeff=0.7772;MQ=53.49;MQ0=9;MQRankSum=-1.732;QD=29.60;ReadPosRankSum=0.640;VQSLOD=5.1015;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,36:37:99:1183,99,0	1/1:0,7:7:15.05:180,15,0	./.	0/0:7,1:2:3.01:0,3,42	1/1:3,27:29:66.20:792,66,0	1/1:0,26:26:69.21:828,69,0	1/1:1,18:13:27.08:323,27,0	1/1:1,13:11:30.09:359,30,0	1/1:1,25:26:66.20:791,66,0	1/1:3,19:21:54.17:647,54,0	1/1:1,16:17:39.12:468,39,0	1/1:1,25:24:69.21:827,69,0	1/1:2,18:20:57.17:676,57,0	1/1:0,26:25:72.22:864,72,0	1/1:3,43:41:99:1295,108,0	1/1:3,36:38:99:1257,105,0	1/1:1,48:48:99:1401,117,0	1/1:1,27:27:63.19:756,63,0	1/1:0,18:17:51.16:612,51,0	1/1:1,22:23:60.18:720,60,0	1/1:0,30:27:72.22:857,72,0	1/1:5,22:27:66.18:771,66,0	1/1:3,24:27:51.15:612,51,0	1/1:2,18:20:41.64:502,42,0	1/1:1,13:14:39.12:468,39,0	1/1:1,26:27:78.24:936,78,0	1/1:1,29:30:81.25:971,81,0	1/1:1,19:19:57.17:684,57,0
chr10	63179198	.	GT	G	6829.82	PASS	AB=1.000;AC=51;AF=0.944;AN=54;BaseQRankSum=7.034;DP=668;FS=4.374;HRun=1;HaplotypeScore=118.7636;InbreedingCoeff=0.5195;MQ=53.25;MQ0=8;MQRankSum=1.996;QD=10.40;ReadPosRankSum=7.653;VQSLOD=2.6841;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:40,0:40:41.57:458,42,0	1/1:7,0:7:13.77:63,14,0	./.	0/0:9,0:3:6:0,6,68	1/1:27,0:26:60.48:276,60,0	1/1:27,0:27:40.63:249,41,0	1/1:18,0:12:25.96:162,26,0	0/1:17,0:13:35.93:102,0,36	1/1:25,0:25:61.79:325,62,0	1/1:20,1:20:22.27:181,22,0	1/1:16,0:16:35.57:162,36,0	1/1:25,0:23:64.26:313,64,0	1/1:20,1:21:13.77:259,14,0	1/1:26,0:25:66.06:310,66,0	1/1:43,0:38:99:478,100,0	1/1:36,1:36:95.70:451,96,0	1/1:49,1:49:89.23:526,89,0	1/1:29,0:28:21.70:223,22,0	1/1:19,0:18:41.23:183,41,0	1/1:23,0:23:33.87:256,34,0	1/1:32,0:29:18.26:265,18,0	1/1:22,1:23:54.52:242,55,0	1/1:24,0:24:46.30:208,46,0	1/1:19,0:19:17.23:157,17,0	1/1:13,0:13:35.79:168,36,0	1/1:26,0:26:65.08:241,65,0	1/1:29,0:29:74.80:355,75,0	1/1:20,0:20:32.40:216,32,0
chr10	63180424	.	G	GCCGCCCGCCCCGCCGC	4457.62	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-1.510;DP=259;FS=17.562;HRun=0;HaplotypeScore=119.8024;InbreedingCoeff=0.7925;MQ=99.25;MQ0=1;MQRankSum=-7.024;QD=96.90;ReadPosRankSum=-1.649;VQSLOD=2.9227;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:75.26:0,75,3291	1/1:1,0:1:3.01:118,3,0	0/0:11,0:11:24.06:0,24,926	0/0:18,0:18:40.35:0,40,1382	0/0:3,0:3:6.02:0,6,190	0/0:8,0:8:18.06:0,18,727	0/0:15,0:15:42.13:0,42,1589	1/1:7,0:11:21.06:932,21,0	0/0:13,0:13:33.11:0,33,1530	0/0:7,0:7:21.07:0,21,844	0/0:3,0:3:9.01:0,9,302	0/0:9,0:9:18.06:0,18,746	0/0:13,0:13:33.10:0,33,1404	0/0:12,0:11:27.07:0,27,1137	0/0:2,0:2:6.02:0,6,191	0/0:3,0:3:6.02:0,6,190	1/1:3,3:10:14.50:1055,15,0	1/1:4,2:10:18.06:1284,18,0	0/0:11,0:11:33.09:0,33,1381	0/0:3,0:3:9.03:0,9,417	0/0:30,0:29:81.28:0,81,3636	1/1:5,0:6:8.99:425,9,0	1/1:2,0:3:3.01:77,3,0	1/1:5,0:5:9.03:566,9,0	0/0:5,0:5:15.05:0,15,652	0/0:11,0:11:27.09:0,27,1121	0/0:6,0:6:15.05:0,15,695	0/0:1,0:1:3.01:0,3,116
chr10	63182428	.	GT	G	6885.31	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=2.453;DP=675;FS=14.191;HRun=1;HaplotypeScore=105.2439;InbreedingCoeff=0.9965;MQ=77.15;MQ0=0;MQRankSum=-5.410;QD=38.90;ReadPosRankSum=1.067;VQSLOD=3.3971;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,160,2541	1/1:0,11:11:24.08:336,24,0	0/0:15,0:15:45.15:0,45,720	0/0:13,0:13:36.10:0,36,543	0/0:12,0:12:36.12:0,36,575	0/0:23,0:23:69.24:0,69,1101	0/0:38,0:38:99:0,114,1817	1/1:0,24:24:72.23:990,72,0	0/0:20,0:20:60.19:0,60,935	0/0:24,1:25:75.22:0,75,1169	0/0:13,0:13:39.12:0,39,598	0/0:37,0:37:99:0,108,1719	0/0:25,0:25:75.21:0,75,1119	0/0:23,0:23:69.24:0,69,1097	0/0:22,0:22:63.21:0,63,1003	0/0:24,0:24:69.22:0,69,1081	1/1:0,34:34:99:1385,99,0	1/1:0,41:41:99:1532,111,0	0/0:20,0:20:57.18:0,57,883	0/0:6,0:6:18.06:0,18,288	0/0:54,0:54:99:0,156,2450	1/1:0,23:23:66.22:923,66,0	1/1:0,10:10:30.10:419,30,0	1/1:0,34:34:93.31:1301,93,0	0/0:21,0:21:63.21:0,63,1007	0/0:30,0:30:87.28:0,87,1368	0/0:16,0:15:48.16:0,48,767	0/0:6,0:6:18.06:0,18,288
chr10	63184054	.	GA	G	11950.46	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=0.690;DP=686;FS=11.205;HRun=10;HaplotypeScore=71.6057;InbreedingCoeff=0.9783;MQ=67.51;MQ0=0;MQRankSum=-1.820;QD=21.08;ReadPosRankSum=2.777;VQSLOD=5.3561;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:21:59.83:0,60,626	1/1:2,13:15:32.98:285,33,0	0/0:17,0:14:12.37:0,12,217	0/0:15,0:14:26.83:0,27,256	0/0:35,2:38:52.86:0,53,989	1/1:1,14:15:8.81:305,9,0	1/1:1,15:16:41.99:365,42,0	1/1:3,26:29:77.88:657,78,0	0/0:5,0:28:59.98:0,60,327	1/1:5,26:31:28.59:599,29,0	1/1:2,20:22:56.98:495,57,0	1/1:2,12:14:26.99:234,27,0	1/1:1,22:23:65.99:573,66,0	1/1:8,16:24:44.96:390,45,0	1/1:5,29:34:80.95:703,81,0	1/1:4,23:28:51.63:533,52,0	1/1:3,30:33:86.98:755,87,0	1/1:4,26:30:68.98:599,69,0	1/1:8,23:31:68.97:599,69,0	1/1:1,18:19:47.89:403,48,0	1/1:0,17:17:47.99:417,48,0	1/1:5,32:37:74.30:785,74,0	1/1:5,28:33:53.89:696,54,0	1/1:4,22:26:62.98:547,63,0	1/1:1,19:21:56.03:475,56,0	1/1:2,31:33:92.98:807,93,0	1/1:4,21:25:56.98:495,57,0	1/1:2,9:11:26.99:234,27,0
chr10	63185531	.	T	TAA	4591.10	PASS	AB=0.767;AC=40;AF=0.714;AN=56;BaseQRankSum=-0.730;DP=479;FS=0.000;HRun=13;HaplotypeScore=75.0135;InbreedingCoeff=0.7942;MQ=79.02;MQ0=4;MQRankSum=0.267;QD=13.79;ReadPosRankSum=-1.170;VQSLOD=3.4295;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:25:53.22:0,53,436	0/0:7,0:9:11.73:0,12,140	0/0:16,0:11:6.27:0,6,40	0/0:14,0:12:11.62:0,12,67	0/1:16,1:20:1.39:1,0,127	1/1:6,25:36:45.13:572,45,0	1/1:5,12:20:26.49:284,26,0	0/0:23,0:25:25.96:0,26,244	1/1:4,1:19:20.97:117,21,0	1/1:5,13:20:30.04:365,30,0	1/1:4,9:13:26.93:295,27,0	1/1:11,4:16:38.51:424,39,0	1/1:1,12:13:18.04:224,18,0	0/1:4,5:10:10.74:75,0,11	1/1:4,6:10:12.51:161,13,0	1/1:1,7:8:9.03:122,9,0	0/0:29,0:31:50.17:0,50,467	0/0:18,0:24:29.01:0,29,267	1/1:10,0:13:13.24:129,13,0	1/1:4,13:20:34.38:377,34,0	1/1:0,8:11:11.53:131,12,0	1/1:1,2:10:13.51:103,14,0	1/1:2,1:10:12.99:76,13,0	1/1:3,0:10:14.97:52,15,0	1/1:6,11:17:16.41:208,16,0	1/1:7,12:19:14.43:393,14,0	1/1:7,16:22:30.08:391,30,0	1/1:2,9:12:9.76:93,10,0
chr10	63189870	.	GGTGTGTGTGTGT	G	14193.22	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=3.964;DP=626;FS=6.417;HRun=0;HaplotypeScore=214.9024;InbreedingCoeff=0.9337;MQ=66.45;MQ0=11;MQRankSum=-7.670;QD=42.12;ReadPosRankSum=6.092;VQSLOD=3.6145;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:35:63.19:0,63,3055	0/0:7,0:7:6.02:0,6,231	0/0:29,0:21:17.74:0,18,461	0/0:33,0:27:31.33:0,31,983	0/0:16,0:16:33.11:0,33,1768	1/1:4,16:21:36.12:1212,36,0	1/1:10,13:23:12.04:424,12,0	0/0:44,0:41:87.26:0,87,3208	0/0:18,0:18:27.07:0,27,1241	1/1:4,14:18:35.91:846,36,0	1/1:4,5:9:6.02:198,6,0	1/1:2,20:23:23.65:824,24,0	1/1:4,10:15:30.10:987,30,0	1/1:6,9:17:24.08:787,24,0	1/1:2,26:29:57.20:1953,57,0	1/1:5,19:24:51.18:1786,51,0	0/0:25,0:25:30.34:0,30,685	0/0:17,0:17:15.01:0,15,529	1/1:8,18:23:44.04:741,44,0	1/1:2,14:16:27.05:793,27,0	1/1:17,25:41:14.86:488,15,0	0/0:12,0:19:27.04:0,27,498	0/0:12,0:12:8.37:0,8,352	0/0:33,0:33:32.66:0,33,1311	1/1:5,18:23:33.11:1095,33,0	1/1:7,17:25:45.04:1327,45,0	1/1:10,12:21:15.52:530,16,0	1/1:3,1:4:6.02:200,6,0
chr10	63189884	.	T	TGTGTGTGTGTGC	4088.13	PASS	AB=0.881;AC=16;AF=0.286;AN=56;BaseQRankSum=-7.905;DP=605;FS=1.676;HRun=0;HaplotypeScore=243.4333;InbreedingCoeff=0.5678;MQ=52.09;MQ0=13;MQRankSum=-0.637;QD=16.75;ReadPosRankSum=-0.713;VQSLOD=2.2096;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:37:75.97:0,76,1484	0/1:2,7:10:8.27:173,0,8	0/0:26,0:14:1.66:0,2,172	0/0:29,0:20:21.73:0,22,267	0/0:13,0:13:30.03:0,30,663	0/0:19,0:19:23.33:0,23,659	0/0:19,0:19:15.03:0,15,286	1/1:42,0:39:36.57:970,37,0	1/1:1,0:25:23.72:861,24,0	0/0:18,0:18:32.97:0,33,492	0/0:8,0:8:7.73:0,8,47	0/0:21,0:21:23.59:0,24,512	0/0:17,0:17:17.12:0,17,520	0/0:16,0:16:14.25:0,14,527	0/0:28,0:28:56.65:0,57,1062	0/0:20,0:20:48.62:0,49,1040	1/1:10,18:32:11.88:489,12,0	1/1:3,12:17:9.03:538,9,0	0/0:26,0:23:53.71:0,54,668	0/1:17,0:17:44.25:44,0,52	0/1:36,0:35:7.30:7,0,88	1/1:19,0:20:3.51:94,4,0	1/1:3,0:16:5.69:237,6,0	0/1:28,0:29:5.55:675,0,6	0/0:21,0:21:20.18:0,20,418	0/0:20,0:20:41.09:0,41,937	0/0:17,0:16:15.52:0,16,422	0/0:5,0:5:9.01:0,9,190
chr10	63193478	.	AAAGTAGC	A	121.44	PASS	AB=0.952;AC=7;AF=0.125;AN=56;BaseQRankSum=1.158;DP=381;FS=4.527;HRun=0;HaplotypeScore=118.7014;InbreedingCoeff=-0.1699;MQ=51.36;MQ0=11;MQRankSum=2.198;QD=1.87;ReadPosRankSum=-1.208;VQSLOD=2.1641;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:69.10:0,69,2490	0/1:5,0:4:67.56:68,0,226	0/0:30,0:22:63.22:0,63,2406	0/0:23,0:13:33.11:0,33,1176	0/0:11,0:11:7.17:0,7,975	0/1:16,0:16:48.04:48,0,1046	0/0:16,0:16:16.74:0,17,1314	0/1:12,0:11:18.47:18,0,1035	0/1:3,3:6:56.77:57,0,186	0/0:17,0:17:29.23:0,29,1887	0/0:7,0:7:17.89:0,18,614	0/0:8,0:8:24.05:0,24,827	0/0:14,0:14:15.22:0,15,1325	0/0:11,0:11:27.08:0,27,979	0/0:17,0:16:48.16:0,48,1804	0/0:11,0:11:6.80:0,7,776	0/0:9,0:8:18.05:0,18,695	0/1:7,0:7:20.88:21,0,472	0/0:15,0:13:36.08:0,36,1436	0/1:10,0:10:12.50:12,0,1020	0/0:27,0:24:36.15:0,36,2254	0/0:12,4:14:24.08:0,24,713	0/1:9,0:8:24.96:25,0,277	0/0:11,1:11:6.10:0,6,158	0/0:10,0:10:25.85:0,26,929	0/0:14,0:14:7.71:0,8,1029	0/0:12,0:12:36.12:0,36,1337	0/0:8,0:7:1.08:0,1,687
chr10	63193487	.	AGAGAGGGCTTGAGAAC	A	153.85	PASS	AB=0.729;AC=2;AF=0.036;AN=56;BaseQRankSum=1.666;DP=392;FS=0.000;HRun=0;HaplotypeScore=175.5638;InbreedingCoeff=-0.0434;MQ=51.69;MQ0=15;MQRankSum=-2.611;QD=15.39;ReadPosRankSum=-0.213;VQSLOD=2.1692;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:27:69.22:0,69,5104	0/1:4,1:4:99:123,0,448	0/0:30,0:21:63.19:0,63,2903	0/0:19,0:10:30.10:0,30,1696	0/0:11,0:11:30.10:0,30,2101	0/0:14,0:14:33.11:0,33,2285	0/0:16,0:16:36.04:0,36,2415	0/0:12,0:9:27.09:0,27,1931	0/1:2,3:5:99:119,0,447	0/0:17,0:17:51.17:0,51,3164	0/0:8,0:8:21.07:0,21,1537	0/0:15,0:15:45.15:0,45,2904	0/0:13,0:13:39.13:0,39,2910	0/0:11,0:11:30.10:0,30,2082	0/0:20,0:19:57.19:0,57,3899	0/0:12,0:12:33.11:0,33,2486	0/0:12,0:11:27.09:0,27,1504	0/0:8,0:7:21.07:0,21,1446	0/0:15,0:13:39.12:0,39,2462	0/0:11,0:11:33.11:0,33,2403	0/0:27,0:24:62.49:0,62,4771	0/0:11,4:14:23.99:0,24,1396	0/0:8,0:7:9.97:0,10,551	0/0:12,1:12:6.26:0,6,420	0/0:11,0:10:25.02:0,25,1669	0/0:14,0:14:42.14:0,42,3200	0/0:15,0:15:45.15:0,45,3552	0/0:6,0:6:18.06:0,18,1405
chr10	63193515	.	T	TAC	9282.30	PASS	AB=0.786;AC=41;AF=0.759;AN=54;BaseQRankSum=-6.454;DP=530;FS=0.000;HRun=0;HaplotypeScore=113.1783;InbreedingCoeff=0.5213;MQ=51.98;MQ0=26;MQRankSum=0.571;QD=22.92;ReadPosRankSum=3.247;VQSLOD=5.5767;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:33:69.20:0,69,821	1/1:6,0:6:5.40:24,5,0	0/0:33,0:14:26.37:0,26,271	0/0:30,0:15:32.68:0,33,318	0/0:16,0:17:38.79:0,39,448	0/1:6,10:16:15.10:268,0,15	1/1:6,17:23:45.15:722,45,0	1/1:16,0:13:23.77:164,24,0	1/1:12,0:12:7.75:45,8,0	1/1:7,13:21:11.56:631,12,0	1/1:2,8:11:18.03:289,18,0	1/1:6,16:22:54.18:859,54,0	1/1:2,15:18:36.12:578,36,0	1/1:3,13:17:30.10:481,30,0	1/1:10,15:25:15.12:729,15,0	1/1:4,15:19:2.94:543,3,0	1/1:11,0:10:10.83:81,11,0	1/1:10,0:9:6.91:56,7,0	1/1:5,7:12:30.03:406,30,0	1/1:4,14:18:2.94:542,3,0	0/1:24,19:38:42.50:778,0,43	0/1:17,0:16:0.01:0,0,0	./.	0/1:16,0:14:0:0,0,0	0/1:7,11:17:28.44:445,0,28	1/1:9,10:21:39.07:574,39,0	1/1:7,14:21:47.52:731,48,0	1/1:2,7:8:21.07:337,21,0
chr10	63193526	.	A	ATG	789.65	PASS	AB=0.767;AC=14;AF=0.250;AN=56;BaseQRankSum=2.770;DP=563;FS=0.000;HRun=0;HaplotypeScore=133.6874;InbreedingCoeff=0.2331;MQ=57.26;MQ0=18;MQRankSum=-5.751;QD=4.62;ReadPosRankSum=1.909;VQSLOD=2.8891;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:35:87.30:0,87,1394	1/1:4,3:7:6.01:65,6,0	0/0:29,0:13:35.08:0,35,489	0/0:31,0:19:53.38:0,53,800	0/0:19,0:19:45.12:0,45,697	0/0:18,0:18:6.14:0,6,158	0/0:26,0:26:2.88:0,3,291	0/1:6,10:14:3.17:634,0,3	0/1:4,11:15:27.55:63,0,28	0/0:22,0:22:45.19:0,45,457	0/0:11,0:11:4.07:0,4,8	0/1:23,0:23:24.67:25,0,53	0/1:20,0:20:3.90:4,0,101	0/1:19,0:19:7.90:8,0,124	0/0:26,0:25:7.25:0,7,146	0/0:20,0:20:24.15:0,24,247	0/0:6,4:10:5.91:0,6,54	0/1:4,6:10:99:105,0,103	0/0:16,0:14:28.21:0,28,244	0/0:18,0:18:13.68:0,14,144	0/0:45,0:41:34.46:0,34,545	0/1:8,10:20:0.11:0,0,0	0/1:7,5:11:0.13:0,0,0	1/1:7,12:19:0.10:0,0,0	0/0:22,0:21:13.09:0,13,276	0/0:23,0:23:46.55:0,47,427	0/0:20,0:20:10.65:0,11,141	1/1:8,0:7:4.45:18,4,0
chr10	63194022	.	T	TGC	5679.13	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-13.631;DP=832;FS=20.622;HRun=0;HaplotypeScore=108.3621;InbreedingCoeff=0.9917;MQ=60.91;MQ0=3;MQRankSum=2.086;QD=23.86;ReadPosRankSum=6.473;VQSLOD=3.3946;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:58:99:0,156,1836	1/1:2,9:11:12.04:212,12,0	0/0:44,0:29:67.86:0,68,736	0/0:46,0:31:67.91:0,68,802	0/0:21,0:21:51.13:0,51,645	0/0:34,0:34:87.16:0,87,1052	0/0:33,0:33:93.11:0,93,1087	1/1:8,23:31:47.37:714,47,0	1/1:9,33:43:30.02:905,30,0	0/0:26,0:26:69.09:0,69,884	0/0:8,0:8:18.03:0,18,213	0/0:42,0:42:99:0,114,1365	0/0:23,0:23:63.15:0,63,796	0/0:34,0:34:87.58:0,88,998	0/0:26,0:26:72.17:0,72,924	0/0:24,0:23:59.98:0,60,737	1/1:5,41:46:29.61:1117,30,0	1/1:1,30:32:51.17:900,51,0	0/0:21,0:21:53.86:0,54,551	0/0:13,0:13:39.08:0,39,468	0/0:61,0:61:99:0,154,1779	1/1:2,16:18:26.78:470,27,0	1/1:1,12:13:21.02:371,21,0	1/1:8,35:44:43.61:991,44,0	0/0:29,0:29:81.14:0,81,950	0/0:24,0:24:63.19:0,63,821	0/0:19,0:19:57.10:0,57,688	0/0:7,0:7:20.94:0,21,210
chr10	63194859	.	T	TA	3539	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=-8.283;DP=552;FS=1.750;HRun=10;HaplotypeScore=62.3479;InbreedingCoeff=0.8978;MQ=74.27;MQ0=1;MQRankSum=-2.470;QD=21.85;ReadPosRankSum=-0.663;VQSLOD=4.3531;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:85.75:0,86,814	1/1:3,10:13:24.06:255,24,0	0/1:10,0:9:4.78:5,0,39	0/0:17,0:17:23.38:0,23,171	0/0:26,0:26:65.79:0,66,526	0/0:19,0:19:44.51:0,45,352	0/0:22,0:22:62.87:0,63,508	1/1:5,24:29:41.28:594,41,0	1/1:3,16:19:39.10:416,39,0	0/0:17,0:17:38.93:0,39,320	0/0:12,0:12:30.03:0,30,264	0/0:26,0:26:71.91:0,72,591	0/0:18,0:18:44.98:0,45,383	0/0:20,0:20:53.93:0,54,443	0/0:20,0:21:59.68:0,60,480	0/0:14,0:14:35.93:0,36,293	1/1:2,26:28:75.19:800,75,0	1/1:1,9:10:24.06:256,24,0	0/0:18,0:18:35.94:0,36,294	0/0:20,0:20:32.84:0,33,265	0/0:23,0:23:59.75:0,60,477	1/1:5,12:17:13.17:329,13,0	1/1:5,8:13:2.47:231,2,0	1/1:1,21:23:62.99:654,63,0	0/0:20,0:20:22.06:0,22,352	0/0:25,0:25:63.81:0,64,537	0/0:21,0:21:56.91:0,57,465	0/0:12,0:12:23.91:0,24,192
chr10	63195150	.	CGT	C	1226.01	PASS	AB=0.955;AC=19;AF=0.365;AN=52;BaseQRankSum=-3.463;DP=644;FS=0.000;HRun=0;HaplotypeScore=120.5384;InbreedingCoeff=-0.2256;MQ=66.92;MQ0=10;MQRankSum=0.120;QD=3.13;ReadPosRankSum=5.208;VQSLOD=1.9466;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,1:39:0.82:0,1,452	0/0:14,0:14:5.83:0,6,55	./.	./.	0/0:7,0:15:18.01:0,18,177	0/1:18,2:20:71.27:71,0,96	1/1:18,16:34:30.04:323,30,0	0/0:26,0:24:25.22:0,25,162	0/1:28,0:28:16.80:17,0,19	0/1:30,1:32:76.76:77,0,232	0/1:7,3:11:0.74:166,0,1	0/1:16,0:16:58.59:59,0,99	0/1:18,0:18:24.43:24,0,84	0/1:22,0:22:57.47:57,0,160	0/1:18,1:19:21.39:21,0,222	0/1:11,0:11:30.72:84,0,31	0/0:24,0:24:14.96:0,15,122	0/0:22,0:21:11.94:0,12,90	1/1:18,0:18:4.94:32,5,0	0/1:12,0:13:32.29:32,0,42	0/1:74,4:78:99:300,0,279	0/0:14,0:14:0.72:0,1,1	0/1:17,0:17:0:0,0,1	0/0:35,0:35:0.60:0,1,2	0/1:21,1:22:53.57:54,0,130	0/1:12,0:12:7.99:8,0,102	0/1:19,1:20:47.78:48,0,206	0/0:11,0:11:8.93:0,9,73
chr10	63195151	.	G	GTGTGTGTGTGTGTA	4070.64	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=-1.570;DP=669;FS=1.019;HRun=0;HaplotypeScore=277.6680;InbreedingCoeff=0.8357;MQ=66.12;MQ0=10;MQRankSum=-6.321;QD=21.54;ReadPosRankSum=-3.557;VQSLOD=1.5629;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:69.11:0,69,1521	1/1:8,7:15:8.18:56,8,0	0/0:26,0:14:11.99:0,12,104	0/0:26,0:16:14.90:0,15,127	0/0:16,0:16:27.04:0,27,507	0/0:20,0:20:48.01:0,48,899	0/0:34,0:34:69.04:0,69,1165	1/1:34,0:32:66.69:1469,67,0	0/0:28,0:28:59.61:0,60,1551	0/0:32,0:32:75.72:0,76,1583	0/0:11,0:11:24.07:0,24,706	0/0:18,0:18:39.08:0,39,1157	0/1:20,0:20:55.03:55,0,546	0/0:23,0:23:57.74:0,58,1162	0/0:19,0:19:15.16:0,15,1277	0/0:11,0:11:24:0,24,413	1/1:25,1:26:26.63:1054,27,0	1/1:25,0:24:50.76:1126,51,0	0/0:20,0:19:42.70:0,43,492	0/0:13,0:13:18.90:0,19,374	0/0:78,0:78:99:0,174,3415	1/1:15,0:15:3.01:49,3,0	1/1:19,0:19:8.16:58,8,0	1/1:35,0:35:18.39:203,18,0	0/0:23,0:23:36.54:0,37,954	0/0:13,0:13:30.07:0,30,785	0/0:21,0:21:57.04:0,57,1461	0/0:11,0:11:19.81:0,20,329
chr10	63195163	.	G	GTA	847.23	PASS	AB=0.988;AC=13;AF=0.232;AN=56;BaseQRankSum=-1.146;DP=682;FS=1.131;HRun=0;HaplotypeScore=134.9961;InbreedingCoeff=0.4153;MQ=52.64;MQ0=12;MQRankSum=-1.958;QD=3.70;ReadPosRankSum=0.418;VQSLOD=2.1838;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:40,0:39:6.67:7,0,636	0/1:14,1:15:9.13:9,0,40	0/0:19,0:7:11.99:0,12,104	0/0:18,0:7:17.80:0,18,143	0/1:18,0:18:75.09:75,0,133	0/0:21,0:21:53.94:0,54,520	0/0:43,0:42:92.52:0,93,747	0/1:34,0:32:99:238,0,220	0/0:30,0:30:59.98:0,60,686	0/0:34,0:34:98.69:0,99,986	0/0:11,0:11:26.98:0,27,259	0/0:22,0:22:53.96:0,54,586	0/0:19,0:19:16.33:0,16,307	0/0:26,0:26:64.24:0,64,667	0/0:19,0:19:47.98:0,48,562	0/0:13,0:13:26.97:0,27,268	1/1:26,0:25:14.50:208,14,0	0/1:20,0:19:14.05:239,0,14	0/0:22,0:21:62.66:0,63,496	0/0:12,0:12:17.93:0,18,200	0/0:80,0:80:99:0,204,1992	1/1:16,4:20:2.99:48,3,0	1/1:20,0:20:2.31:23,2,0	1/1:32,4:35:18.79:160,19,0	0/0:20,0:20:44.39:0,44,502	0/0:16,0:16:41.86:0,42,464	0/0:20,0:20:59.96:0,60,642	0/0:8,0:8:20.61:0,21,189
chr10	63195170	.	T	TGTGTGTGTGTGG	703.17	PASS	AB=0.968;AC=7;AF=0.125;AN=56;BaseQRankSum=5.089;DP=661;FS=5.021;HRun=0;HaplotypeScore=233.6646;InbreedingCoeff=0.2692;MQ=52.48;MQ0=10;MQRankSum=-2.164;QD=5.67;ReadPosRankSum=-1.540;VQSLOD=2.1007;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:39:69.11:0,69,1440	0/0:14,0:14:6.24:0,6,48	0/0:15,0:6:5.67:0,6,34	0/0:14,0:5:2.98:0,3,22	0/0:17,0:17:30.04:0,30,451	0/0:19,0:19:32.57:0,33,687	0/0:39,0:38:60.05:0,60,1036	0/0:32,0:30:43.35:0,43,390	0/0:29,0:29:41.86:0,42,1085	0/0:35,0:35:78.76:0,79,1495	0/0:12,0:12:30.04:0,30,677	0/0:23,0:23:51.05:0,51,1150	0/0:15,0:15:27.55:0,28,471	0/0:28,0:28:46.09:0,46,976	0/0:18,0:18:39.08:0,39,1120	0/0:12,0:12:27.02:0,27,430	0/1:25,0:24:36.81:510,0,37	0/1:20,0:19:99:214,0,120	0/0:21,0:20:25.78:0,26,323	0/0:11,0:11:12.03:0,12,304	0/0:80,0:80:99:0,155,2955	1/1:17,3:20:3.83:20,4,0	1/1:21,0:21:2.22:8,2,0	0/1:34,3:37:34.76:69,0,35	0/0:19,0:19:36.54:0,37,873	0/0:16,0:16:40.57:0,41,829	0/0:20,0:20:54.04:0,54,1226	0/0:7,0:7:11.82:0,12,254
chr10	63195193	.	GCGCA	G	375.91	PASS	AB=0.910;AC=11;AF=0.196;AN=56;BaseQRankSum=3.522;DP=548;FS=0.767;HRun=0;HaplotypeScore=128.9180;InbreedingCoeff=0.3817;MQ=67.87;MQ0=1;MQRankSum=-1.218;QD=2.32;ReadPosRankSum=-2.427;VQSLOD=2.1145;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:75.13:0,75,1545	0/1:13,0:13:41.61:60,0,42	0/0:10,0:8:6.40:0,6,88	0/1:12,0:9:15.15:15,0,102	0/0:17,0:17:41.92:0,42,732	0/0:17,0:17:45.11:0,45,930	0/0:31,0:30:69.22:0,69,1306	1/1:19,0:19:26.80:192,27,0	0/1:26,0:26:8.59:44,0,9	0/0:27,0:27:71.88:0,72,1652	0/0:10,0:10:27.08:0,27,464	0/0:22,0:22:44.47:0,44,946	0/0:14,0:14:32.69:0,33,615	0/0:21,0:21:50.98:0,51,1127	0/0:16,0:16:45.13:0,45,1005	0/0:8,0:8:21.04:0,21,402	0/1:20,0:19:35.41:35,0,46	0/0:17,0:16:2.88:0,3,25	0/0:25,0:25:66.02:0,66,1169	0/0:7,0:7:9.03:0,9,234	0/0:58,0:58:99:0,134,2858	1/1:5,16:21:0.20:0,0,0	0/1:3,14:17:0.47:0,0,0	1/1:11,22:33:9.03:170,9,0	0/0:14,0:14:39.12:0,39,896	0/0:17,0:17:42.14:0,42,894	0/0:18,0:18:47.90:0,48,1086	0/0:4,0:4:12.04:0,12,215
chr10	63195195	.	GCA	G	1257.52	PASS	AB=0.947;AC=16;AF=0.286;AN=56;BaseQRankSum=2.896;DP=553;FS=6.600;HRun=0;HaplotypeScore=109.9386;InbreedingCoeff=0.7901;MQ=67.94;MQ0=1;MQRankSum=-1.194;QD=6.95;ReadPosRankSum=-0.882;VQSLOD=2.6844;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:56.66:0,57,1000	1/1:11,2:13:14.32:146,14,0	0/0:10,0:8:7.65:0,8,96	0/1:13,0:9:12.24:12,0,43	0/0:18,0:18:44.85:0,45,546	0/0:18,0:18:50.96:0,51,701	0/0:32,0:31:69.46:0,69,748	1/1:2,19:21:50.73:551,51,0	1/1:0,25:25:30.10:446,30,0	0/0:27,0:27:81.20:0,81,1234	0/0:10,0:10:14.27:0,14,248	0/0:19,0:19:48.12:0,48,666	0/0:14,0:14:27.37:0,27,408	0/0:19,0:19:51.15:0,51,782	0/0:16,0:16:44.78:0,45,699	0/0:9,0:9:24.04:0,24,317	1/1:3,18:20:12.18:91,12,0	1/1:3,14:16:8.86:90,9,0	0/0:25,0:25:65.88:0,66,843	0/0:7,0:7:9.03:0,9,164	0/0:58,0:58:99:0,137,1973	1/1:20,1:21:0.30:0,0,0	0/1:15,2:17:0.31:0,0,0	1/1:32,1:33:9.02:97,9,0	0/0:15,0:15:38.71:0,39,609	0/0:17,0:17:44.77:0,45,654	0/0:20,0:20:52.79:0,53,768	0/0:4,0:4:12:0,12,129
chr10	63197725	.	AAC	A	757.30	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.609;DP=762;FS=7.095;HRun=0;HaplotypeScore=85.4298;InbreedingCoeff=0.9996;MQ=65.89;MQ0=2;MQRankSum=-0.453;QD=25.24;ReadPosRankSum=1.439;VQSLOD=4.5933;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,105,1738	0/0:11,0:11:33.10:0,33,538	0/0:28,0:23:57.67:0,58,967	0/0:34,0:29:75.20:0,75,1264	0/0:20,0:20:57.19:0,57,980	0/0:24,0:24:66.18:0,66,1044	0/0:21,0:21:36.86:0,37,976	0/0:30,0:30:77.05:0,77,1198	1/1:1,29:30:63.21:852,63,0	0/0:34,0:34:99:0,99,1671	0/0:19,0:19:48.16:0,48,808	0/0:28,0:28:78.18:0,78,1311	0/0:26,0:26:72.25:0,72,1255	0/0:21,0:21:60.21:0,60,1042	0/0:29,0:29:84.27:0,84,1440	0/0:37,0:37:99:0,108,1876	0/0:28,0:28:72.18:0,72,1140	0/0:39,0:38:99:0,111,1819	0/0:15,0:14:39.12:0,39,642	0/0:24,0:24:69.21:0,69,1146	0/0:37,0:37:99:0,99,1689	0/0:25,0:25:72.25:0,72,1249	0/0:26,0:26:75.26:0,75,1304	0/0:32,0:32:87.26:0,87,1460	0/0:23,0:23:54.16:0,54,891	0/0:25,0:25:66.22:0,66,1116	0/0:34,0:34:96.27:0,96,1558	0/0:22,0:22:60.12:0,60,933
chr10	63197849	.	A	AT	668.43	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-5.174;DP=720;FS=6.026;HRun=9;HaplotypeScore=72.7504;InbreedingCoeff=0.9976;MQ=77.31;MQ0=0;MQRankSum=-3.583;QD=21.56;ReadPosRankSum=0.241;VQSLOD=4.3711;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,105,911	0/0:10,0:10:29.99:0,30,260	0/0:29,0:26:36.36:0,36,325	0/0:20,0:20:41.64:0,42,347	0/0:25,0:25:59.95:0,60,517	0/0:28,0:28:71.98:0,72,625	0/0:22,0:22:59.99:0,60,521	0/0:36,0:36:82.96:0,83,704	1/1:2,29:31:69.19:763,69,0	0/0:38,0:37:68.81:0,69,826	0/0:22,0:22:56.97:0,57,492	0/0:22,1:23:26.81:0,27,461	0/0:29,0:29:62.94:0,63,539	0/0:16,0:16:44.99:0,45,390	0/0:28,0:28:80.98:0,81,703	0/0:22,0:22:53.97:0,54,469	0/0:25,0:25:59.98:0,60,521	0/0:20,0:20:56.92:0,57,485	0/0:21,0:21:56:0,56,470	0/0:35,0:35:92.97:0,93,807	0/0:13,0:13:38.99:0,39,339	0/0:28,0:28:74.88:0,75,641	0/0:19,0:19:43.63:0,44,371	0/0:29,1:30:29.57:0,30,599	0/0:27,0:28:82.96:0,83,694	0/0:25,0:25:62.98:0,63,547	0/0:32,0:32:89.96:0,90,778	0/0:25,0:25:56.95:0,57,491
chr10	63198380	.	CTT	C	869.96	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.107;DP=650;FS=9.401;HRun=3;HaplotypeScore=73.9199;InbreedingCoeff=0.9994;MQ=88.97;MQ0=1;MQRankSum=-1.635;QD=36.25;ReadPosRankSum=2.466;VQSLOD=2.6714;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,123,2376	0/0:11,0:11:30.10:0,30,578	0/0:17,0:17:48.16:0,48,909	0/0:30,0:30:84.53:0,85,1410	0/0:22,0:22:63.22:0,63,1217	0/0:25,0:25:75.26:0,75,1427	0/0:27,0:27:75.22:0,75,1369	0/0:29,0:29:84.29:0,84,1624	1/1:0,24:23:63.21:965,63,0	0/0:25,0:25:75.26:0,75,1438	0/0:18,0:18:54.17:0,54,1010	0/0:25,0:25:72.23:0,72,1342	0/0:25,0:25:75.26:0,75,1435	0/0:18,0:18:54.19:0,54,1043	0/0:24,0:24:72.25:0,72,1379	0/0:17,0:17:51.17:0,51,974	0/0:35,0:35:99:0,102,1935	0/0:23,0:23:69.24:0,69,1319	0/0:18,0:18:54.18:0,54,1013	0/0:27,0:27:81.26:0,81,1532	0/0:25,0:25:72.24:0,72,1353	0/0:19,0:19:57.18:0,57,1069	0/0:15,0:15:45.15:0,45,869	0/0:27,0:27:81.27:0,81,1518	0/0:19,0:19:57.17:0,57,1033	0/0:32,0:32:96.33:0,96,1827	0/0:16,0:16:48.16:0,48,928	0/0:14,0:14:42.14:0,42,799
chr10	63198928	.	G	GAAA	1674.05	PASS	AB=0.980;AC=21;AF=0.375;AN=56;BaseQRankSum=-0.101;DP=442;FS=3.748;HRun=12;HaplotypeScore=97.3641;InbreedingCoeff=0.5217;MQ=39.63;MQ0=23;MQRankSum=-4.592;QD=8.45;ReadPosRankSum=-0.568;VQSLOD=0.4916;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:19:9.18:0,9,87	1/1:5,2:8:17.10:213,17,0	0/0:20,0:2:2.87:0,3,21	0/0:21,0:6:1.91:0,2,22	0/0:21,0:23:14.49:0,14,195	0/1:14,0:14:2.27:5,0,2	0/0:11,0:12:10.61:0,11,157	1/1:7,10:16:34.14:390,34,0	1/1:6,0:9:23.46:214,23,0	0/0:20,0:17:26.98:0,27,263	0/1:16,0:18:7.19:7,0,109	0/0:7,0:7:8.93:0,9,74	0/0:11,0:10:0.92:0,1,108	0/1:12,0:12:7.99:8,0,123	0/0:14,0:14:5.30:0,5,129	0/0:8,0:9:13.18:0,13,140	1/1:17,4:18:20.93:280,21,0	1/1:19,3:19:22.11:293,22,0	0/0:13,0:16:12.21:0,12,96	0/0:24,0:24:19.81:0,20,133	0/0:3,0:2:3.01:0,3,34	1/1:12,3:13:16.15:139,16,0	1/1:8,3:14:17.26:243,17,0	1/1:12,1:12:8.13:47,8,0	0/0:26,0:25:29.62:0,30,262	0/1:19,0:18:19.64:20,0,211	0/1:13,0:13:1.90:2,0,144	0/0:15,0:11:5.33:0,5,43
chr10	63199415	.	G	GA	787.66	PASS	AB=0.880;AC=8;AF=0.235;AN=34;BaseQRankSum=3.923;DP=790;FS=13.543;HRun=0;HaplotypeScore=79.8672;InbreedingCoeff=-0.1788;MQ=19.01;MQ0=413;MQRankSum=-1.902;QD=1.75;ReadPosRankSum=3.473;VQSLOD=0.7098;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:2:2.88:0,3,15	0/1:18,1:3:30.91:34,0,31	./.	./.	./.	1/1:6,1:2:2.04:6,2,0	0/1:35,0:2:0:0,0,0	./.	0/1:58,5:7:29.76:30,0,91	./.	./.	0/0:11,0:1:3.01:0,3,42	0/0:13,0:3:4.26:0,4,45	0/0:16,0:2:3.01:0,3,42	0/0:11,0:4:5.97:0,6,47	0/0:12,0:2:3.01:0,3,42	0/1:84,30:39:99:224,0,404	0/1:59,17:28:99:221,0,315	0/0:10,0:3:6.01:0,6,64	./.	0/0:57,0:6:6.01:0,6,67	0/0:30,1:3:5.93:0,6,40	./.	0/1:102,35:47:99:374,0,206	./.	0/0:6,0:1:3.01:0,3,42	./.	./.
chr10	63199495	.	A	AG	2244.65	PASS	AB=0.619;AC=7;AF=0.125;AN=56;BaseQRankSum=9.236;DP=1142;FS=7.931;HRun=5;HaplotypeScore=168.7356;InbreedingCoeff=-0.1528;MQ=44.54;MQ0=126;MQRankSum=-4.842;QD=3.10;ReadPosRankSum=-0.412;VQSLOD=-0.5503;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:27:78.19:0,78,837	0/1:16,34:39:71.48:71,0,80	0/0:17,0:7:15.03:0,15,157	0/0:23,0:10:17.43:0,17,183	0/0:7,0:7:15.04:0,15,161	0/0:12,0:11:18.04:0,18,193	0/0:39,0:38:99:0,108,1159	0/0:67,0:45:16.74:0,17,614	0/1:34,30:45:99:347,0,140	0/0:12,0:10:24.06:0,24,258	0/0:3,0:3:6.01:0,6,64	0/0:14,0:13:36.09:0,36,382	0/0:19,0:17:42.10:0,42,448	0/0:22,0:20:51.11:0,51,539	0/0:19,0:19:51.11:0,51,539	0/0:11,0:10:30.08:0,30,322	0/1:68,82:107:99:832,0,384	0/1:45,93:106:99:552,0,459	0/0:13,0:12:36.09:0,36,386	0/0:9,0:8:15.03:0,15,159	0/0:68,0:54:99:0,110,1260	0/1:25,68:74:75.56:76,0,79	0/1:16,21:25:15.41:15,0,198	0/1:67,113:123:99:482,0,199	0/0:9,0:7:19.86:0,20,198	0/0:9,0:8:21.05:0,21,225	0/0:10,0:10:16.28:0,16,187	0/0:4,0:4:12.03:0,12,129
chr10	63202660	.	CTCCG	C	2824.43	PASS	AB=0.914;AC=16;AF=0.286;AN=56;BaseQRankSum=9.057;DP=702;FS=4.481;HRun=0;HaplotypeScore=132.9699;InbreedingCoeff=0.7316;MQ=72.63;MQ0=1;MQRankSum=-0.625;QD=14.94;ReadPosRankSum=2.283;VQSLOD=3.4679;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:84.24:0,84,1935	1/1:6,5:11:5.30:96,5,0	0/0:17,0:12:9:0,9,141	0/0:26,0:26:1.80:0,2,237	0/0:14,0:14:30.10:0,30,717	0/1:13,1:13:21.35:21,0,524	0/0:30,0:30:57.16:0,57,1282	1/1:16,7:22:18.03:239,18,0	0/0:38,0:38:54.18:0,54,890	0/0:32,0:32:57.18:0,57,1301	0/0:9,0:9:24.04:0,24,503	0/0:33,0:34:69.20:0,69,1565	0/0:41,0:41:90.31:0,90,2133	0/0:35,0:35:75.26:0,75,1773	0/0:26,1:27:8.63:0,9,976	0/0:18,0:18:42.14:0,42,985	1/1:12,30:42:72.25:1163,72,0	1/1:13,16:29:33.11:527,33,0	0/0:22,0:22:30.05:0,30,662	0/0:11,0:11:15.05:0,15,359	0/0:62,0:62:99:0,126,2865	1/1:5,8:14:17.98:238,18,0	1/1:9,6:15:12.03:172,12,0	1/1:9,15:24:38.34:548,38,0	0/0:20,0:20:42.14:0,42,1006	0/0:31,0:31:57.12:0,57,1215	0/1:15,2:17:12.28:12,0,760	0/0:4,0:4:6.02:0,6,105
chr10	63202675	.	C	CGTCT	1299.44	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.836;DP=687;FS=6.155;HRun=0;HaplotypeScore=141.3295;InbreedingCoeff=0.8496;MQ=61.22;MQ0=2;MQRankSum=-6.675;QD=35.12;ReadPosRankSum=2.679;VQSLOD=3.6659;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,129,1873	0/0:11,0:11:22.31:0,22,179	0/0:15,0:9:19.23:0,19,191	0/0:14,0:13:27.77:0,28,304	0/0:13,0:13:38.94:0,39,631	0/0:11,0:10:27.09:0,27,481	0/0:26,0:26:75.05:0,75,1103	0/0:16,0:15:29.52:0,30,232	1/1:0,37:37:54.19:1394,54,0	0/0:31,0:31:82.13:0,82,1202	0/0:9,0:9:24.07:0,24,388	0/0:34,0:34:93.03:0,93,1417	0/0:40,0:40:99:0,117,1828	0/0:39,0:39:99:0,108,1620	0/0:30,0:30:86.94:0,87,1124	0/0:20,0:20:57.08:0,57,907	0/0:41,0:41:95.93:0,96,968	0/0:25,0:25:50.97:0,51,504	0/0:20,0:20:50.99:0,51,677	0/0:11,0:11:6.06:0,6,352	0/0:62,0:62:99:0,177,2504	0/0:18,0:18:47.62:0,48,388	0/0:15,0:15:35.53:0,36,291	0/0:26,0:26:59.54:0,60,579	0/0:24,0:24:63.04:0,63,915	0/0:32,0:32:92.61:0,93,1157	0/0:16,0:16:42.12:0,42,704	0/0:4,0:4:9.02:0,9,125
chr10	63202712	.	G	GCC	2485.38	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-3.272;DP=691;FS=1.806;HRun=2;HaplotypeScore=102.4900;InbreedingCoeff=0.9406;MQ=76.08;MQ0=0;MQRankSum=-1.248;QD=37.10;ReadPosRankSum=1.117;VQSLOD=3.8308;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,141,1998	0/0:4,0:4:6.02:0,6,89	0/0:15,0:15:45.15:0,45,651	0/0:20,0:19:31.94:0,32,631	0/0:13,0:13:36.11:0,36,507	0/0:14,0:14:39.13:0,39,574	0/0:28,0:28:81.21:0,81,1113	0/0:21,0:21:54.15:0,54,728	0/0:29,0:29:66.22:0,66,957	0/0:32,0:32:90.28:0,90,1290	0/0:6,0:6:18.06:0,18,265	0/0:35,0:35:99:0,102,1501	0/0:38,0:38:99:0,108,1566	0/0:31,0:31:87.29:0,87,1281	0/0:35,0:35:99:0,99,1439	0/0:16,0:16:45.15:0,45,663	0/0:46,0:46:99:0,120,1717	0/0:19,0:19:48.16:0,48,700	0/0:22,0:22:54.16:0,54,755	0/0:8,0:8:24.08:0,24,353	0/0:68,0:68:99:0,205,2979	1/1:3,16:20:36.07:631,36,0	1/1:2,11:13:27.09:501,27,0	1/1:3,31:34:84.21:1496,84,0	0/0:24,0:24:72.24:0,72,1058	0/0:33,0:33:96.31:0,96,1378	0/0:17,0:17:48.16:0,48,704	0/0:3,0:3:9.03:0,9,133
chr10	63203096	.	AT	A	2154.47	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.103;DP=719;FS=16.881;HRun=2;HaplotypeScore=80.3308;InbreedingCoeff=0.9970;MQ=82.88;MQ0=0;MQRankSum=-4.517;QD=31.22;ReadPosRankSum=0.670;VQSLOD=1.9936;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,102,1481	0/0:12,0:12:36.10:0,36,517	0/0:21,0:21:60.18:0,60,824	0/0:26,0:26:78:0,78,1061	0/0:13,0:13:39.11:0,39,545	0/0:13,0:13:39.10:0,39,543	0/0:47,0:47:99:0,141,2049	0/0:27,0:27:80.28:0,80,1136	0/0:23,0:23:69.22:0,69,1011	0/0:25,0:25:66.20:0,66,989	0/0:7,0:7:18.06:0,18,269	0/0:46,0:46:99:0,138,2043	0/0:29,0:29:87.27:0,87,1262	0/0:28,0:28:84.28:0,84,1241	0/0:26,0:26:75.20:0,75,1079	0/0:17,0:17:51.17:0,51,764	0/0:46,0:46:99:0,135,1983	0/0:34,0:34:99:0,99,1418	0/0:17,0:16:48.16:0,48,719	0/0:17,0:17:51.16:0,51,745	0/0:65,0:65:99:0,184,2735	1/1:1,17:18:42.14:545,42,0	1/1:0,14:14:36.12:467,36,0	1/1:0,37:37:99:1285,99,0	0/0:15,0:15:45.13:0,45,652	0/0:30,0:30:81.27:0,81,1214	0/0:16,0:16:48.14:0,48,674	0/0:15,0:15:45.15:0,45,672
chr10	63204528	.	TG	T	2856.96	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=9.324;DP=649;FS=4.211;HRun=7;HaplotypeScore=64.6998;InbreedingCoeff=0.9764;MQ=88.80;MQ0=0;MQRankSum=-1.746;QD=25.74;ReadPosRankSum=-0.957;VQSLOD=3.9434;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,111,1356	1/1:1,14:15:7.36:391,7,0	0/0:23,0:23:62.94:0,63,723	0/0:27,0:27:63.11:0,63,722	0/0:18,0:18:48.14:0,48,590	0/0:25,0:25:60.19:0,60,755	0/0:37,0:37:96.26:0,96,1189	1/1:3,29:32:84.17:846,84,0	0/0:27,0:27:78.24:0,78,967	0/0:27,0:27:75.23:0,75,933	0/0:19,0:19:57.18:0,57,714	0/0:24,0:24:69.20:0,69,833	0/0:19,0:19:54.16:0,54,667	0/0:22,0:22:60.18:0,60,742	0/0:21,0:21:51.16:0,51,641	0/0:14,0:14:39.12:0,39,490	1/1:0,41:41:99:1133,111,0	1/1:1,22:23:63.14:643,63,0	0/0:21,0:21:51.16:0,51,639	0/0:8,0:8:24.08:0,24,299	0/0:33,0:33:87.27:0,87,1081	0/0:18,0:18:42.12:0,42,515	0/0:19,0:19:54.15:0,54,664	0/0:26,0:26:72.23:0,72,899	0/0:15,0:15:45.13:0,45,550	0/0:25,0:25:66.19:0,66,807	0/0:16,0:16:42.12:0,42,513	0/0:12,0:12:36.12:0,36,453
chr10	63205145	.	C	CCATCCAT	25350.09	PASS	AB=0.568;AC=40;AF=0.714;AN=56;BaseQRankSum=-10.366;DP=1027;FS=6.028;HRun=0;HaplotypeScore=203.9536;InbreedingCoeff=0.6588;MQ=51.68;MQ0=2;MQRankSum=-8.505;QD=31.85;ReadPosRankSum=-0.132;VQSLOD=3.6177;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:10,22:33:17.07:295,0,17	1/1:3,5:8:9.03:336,9,0	0/0:30,0:25:20.89:0,21,295	0/0:31,0:24:27.05:0,27,522	1/1:7,19:30:27.09:565,27,0	0/1:7,21:28:11.60:896,0,12	1/1:15,16:32:9.86:285,10,0	1/1:42,0:39:57.19:1119,57,0	0/0:64,0:64:99:0,118,2673	1/1:14,39:52:99:2773,105,0	1/1:4,16:21:15.05:505,15,0	1/1:11,30:43:45.15:1678,45,0	1/1:7,27:37:44.94:1677,45,0	1/1:11,15:26:39.13:1444,39,0	1/1:13,50:66:69.24:2569,69,0	0/1:5,36:46:28.14:1401,0,28	0/1:12,28:41:2.26:633,0,2	1/1:14,22:38:18.03:526,18,0	1/1:11,14:28:57.19:1238,57,0	1/1:7,21:31:33.11:1085,33,0	1/1:17,40:60:11.49:419,11,0	0/0:38,0:38:81.27:0,81,1757	0/0:26,0:26:54.14:0,54,1191	0/0:42,0:42:95.52:0,96,2027	1/1:12,26:43:39.09:1454,39,0	1/1:12,31:45:87.28:2736,87,0	1/1:8,22:32:24.08:818,24,0	1/1:0,11:11:24.08:896,24,0
chr10	63205363	.	TCATC	T	14532.45	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=8.862;DP=876;FS=3.363;HRun=0;HaplotypeScore=182.5580;InbreedingCoeff=0.9565;MQ=55.47;MQ0=8;MQRankSum=1.450;QD=27.68;ReadPosRankSum=2.980;VQSLOD=4.6407;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:88.79:0,89,2040	0/0:11,0:11:15.05:0,15,340	0/0:41,0:28:32.78:0,33,664	0/0:45,0:24:37.48:0,37,727	0/0:20,0:20:51.16:0,51,1192	1/1:9,10:19:18.06:301,18,0	1/1:9,25:34:34.18:802,34,0	0/0:28,0:28:63.22:0,63,1463	0/0:33,0:33:84.27:0,84,1962	1/1:11,28:38:78.21:1242,78,0	1/1:4,9:13:21.07:351,21,0	1/1:3,44:47:99:1745,108,0	1/1:7,32:39:78.15:1243,78,0	1/1:7,25:31:60.16:973,60,0	1/1:23,36:59:99:2050,132,0	1/1:10,42:51:6.17:1526,6,0	0/0:32,0:32:84.18:0,84,1910	0/0:26,0:26:18.85:0,19,1208	1/1:10,12:19:34.53:410,35,0	1/1:8,11:19:27.05:421,27,0	1/1:31,25:55:70.81:1207,71,0	0/0:11,0:20:9.88:0,10,331	0/0:9,0:20:23.38:0,23,413	0/0:16,0:31:8.83:0,9,372	1/1:7,13:20:21.03:306,21,0	1/1:15,21:36:63.19:1004,63,0	1/1:10,20:30:48.16:802,48,0	1/1:5,3:8:9.03:150,9,0
chr10	63205406	.	TATCCATCCATATCC	T	1070.03	PASS	AB=0.808;AC=5;AF=0.089;AN=56;BaseQRankSum=4.208;DP=892;FS=15.567;HRun=0;HaplotypeScore=386.0681;InbreedingCoeff=0.7343;MQ=64.14;MQ0=5;MQRankSum=-4.403;QD=15.29;ReadPosRankSum=2.171;VQSLOD=0.8490;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,111,5787	0/0:7,0:7:21.07:0,21,1097	0/0:37,0:33:84.28:0,84,3110	0/0:39,0:34:56.76:0,57,3171	0/0:14,0:14:39.13:0,39,2490	0/0:24,0:24:60.21:0,60,3071	0/0:34,0:34:66.23:0,66,3665	0/0:40,0:40:99:0,102,4171	0/0:32,0:32:81.26:0,81,4487	0/0:35,0:35:90.30:0,90,4608	0/0:10,0:10:30.10:0,30,1753	0/0:55,0:55:99:0,135,7683	0/0:46,0:46:99:0,124,6625	0/0:36,0:35:90.26:0,90,5034	0/0:59,0:59:99:0,157,9196	0/0:52,0:51:99:0,129,7539	0/0:40,0:40:99:0,102,5836	0/0:27,0:28:78.06:0,78,4406	0/0:22,0:22:39.12:0,39,1449	0/0:20,0:20:57.20:0,57,3076	0/0:60,0:62:99:0,131,6934	1/1:11,19:30:10.27:482,10,0	1/1:6,13:19:11.87:489,12,0	0/1:15,5:21:99:218,0,174	0/0:16,0:16:36.08:0,36,1766	0/0:35,0:35:81.28:0,81,4547	0/0:27,0:27:60.16:0,60,3037	0/0:8,0:8:15.05:0,15,772
chr10	63206236	.	T	TA	7231.56	PASS	AB=0.679;AC=39;AF=0.780;AN=50;BaseQRankSum=6.016;DP=452;FS=15.132;HRun=10;HaplotypeScore=88.5350;InbreedingCoeff=0.5427;MQ=51.32;MQ0=20;MQRankSum=-4.800;QD=19.76;ReadPosRankSum=-0.641;VQSLOD=3.9487;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:40:84.35:0,84,687	1/1:0,2:2:6.02:64,6,0	0/0:9,0:3:8.74:0,9,62	0/0:6,0:3:2.47:0,2,16	0/0:29,0:29:71.89:0,72,591	1/1:4,13:16:36.09:384,36,0	0/1:3,6:9:3.59:171,0,4	0/1:13,9:19:37.89:240,0,38	1/1:5,0:16:37:190,37,0	1/1:6,15:20:45.11:480,45,0	1/1:8,14:21:47.91:466,48,0	1/1:6,10:14:13.91:272,14,0	1/1:3,10:12:30.96:322,31,0	1/1:3,14:17:45.07:468,45,0	1/1:9,20:27:23.48:454,23,0	1/1:4,10:14:30.08:320,30,0	1/1:10,10:12:5.37:242,5,0	1/1:4,17:18:11.47:327,11,0	1/1:12,5:15:5.05:225,5,0	1/1:5,14:19:45.07:467,45,0	0/1:5,3:8:12.61:84,0,13	./.	./.	./.	1/1:5,13:19:44.88:445,45,0	1/1:6,18:23:54.14:575,54,0	1/1:4,25:28:78.15:815,78,0	1/1:3,7:10:19.34:221,19,0
chr10	63206251	.	CAA	C	6310.35	PASS	AB=1.000;AC=33;AF=0.660;AN=50;BaseQRankSum=4.776;DP=425;FS=14.188;HRun=10;HaplotypeScore=98.8957;InbreedingCoeff=0.8324;MQ=56.34;MQ0=3;MQRankSum=-3.749;QD=22.62;ReadPosRankSum=1.372;VQSLOD=2.7340;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:87.26:0,87,1312	0/0:1,0:2:2.50:0,2,9	0/0:6,0:4:8.73:0,9,70	0/0:7,0:4:7.80:0,8,74	0/0:32,0:32:87.30:0,87,1367	1/1:4,10:13:29.88:287,30,0	1/1:3,5:8:21.02:215,21,0	0/0:7,0:18:27.32:0,27,94	0/1:18,0:18:82.72:107,0,83	1/1:2,18:20:57.11:615,57,0	1/1:6,15:21:48.02:494,48,0	1/1:4,10:13:26.96:275,27,0	1/1:5,12:16:29.04:353,29,0	1/1:4,11:14:36.09:401,36,0	1/1:4,19:23:41.91:420,42,0	1/1:4,8:12:27:285,27,0	0/0:1,0:16:32.91:0,33,123	0/0:6,0:22:30.42:0,30,104	1/1:2,10:12:33.08:367,33,0	1/1:2,17:19:47.20:476,47,0	1/1:2,4:6:15.04:167,15,0	./.	./.	./.	1/1:3,13:16:38.94:395,39,0	1/1:7,16:21:45.08:485,45,0	1/1:6,26:31:72.09:784,72,0	1/1:4,5:9:5.70:185,6,0
chr10	63206260	.	AAT	A	1955.32	PASS	AB=0.988;AC=29;AF=0.537;AN=54;BaseQRankSum=10.706;DP=408;FS=18.054;HRun=0;HaplotypeScore=98.2850;InbreedingCoeff=0.2632;MQ=60.66;MQ0=3;MQRankSum=-2.612;QD=7.27;ReadPosRankSum=4.848;VQSLOD=1.9142;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:78.27:0,78,1304	0/0:2,0:2:5.90:0,6,41	0/0:8,0:6:5.07:0,5,123	0/0:7,0:4:3.47:0,3,52	0/0:31,0:31:90.29:0,90,1471	0/1:12,0:11:2.44:67,0,2	0/1:7,1:8:4.41:85,0,4	0/0:15,0:15:34.98:0,35,206	1/1:5,17:22:24.08:322,24,0	0/1:22,0:22:11.52:151,0,12	0/1:19,0:19:9.32:139,0,9	0/1:14,0:13:26.31:52,0,26	0/1:17,0:16:39.03:75,0,39	1/1:13,0:12:32.58:161,33,0	1/1:20,1:21:15:137,15,0	1/1:11,0:11:21.84:114,22,0	0/0:21,0:18:40.67:0,41,232	0/0:20,0:18:43.65:0,44,245	0/1:15,0:14:31.44:84,0,31	0/1:18,0:18:2.64:129,0,3	0/1:9,0:9:24.85:25,0,50	1/1:1,0:1:3:25,3,0	1/1:1,0:1:2.99:23,3,0	./.	1/1:14,0:14:2.36:74,2,0	1/1:17,0:15:7.16:102,7,0	1/1:28,0:27:61.50:308,61,0	1/1:7,0:7:16.53:60,17,0
chr10	63207365	.	G	GCAGGA	14734.65	PASS	AB=0.802;AC=54;AF=0.964;AN=56;BaseQRankSum=0.730;DP=386;FS=11.432;HRun=0;HaplotypeScore=204.8145;InbreedingCoeff=-0.0451;MQ=52.29;MQ0=0;MQRankSum=-4.713;QD=38.17;ReadPosRankSum=2.766;VQSLOD=4.0044;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:16:33.11:555,33,0	1/1:10,0:10:19.62:342,20,0	0/1:4,4:8:91.42:378,0,91	0/1:14,1:15:99:184,0,151	1/1:12,0:12:8.52:132,9,0	1/1:18,0:18:48.16:781,48,0	1/1:21,0:21:51.12:815,51,0	1/1:16,0:16:48.16:1109,48,0	1/1:12,0:12:33.11:607,33,0	1/1:14,0:14:36.12:735,36,0	1/1:9,0:9:24.08:344,24,0	1/1:16,0:16:45.14:741,45,0	1/1:15,0:15:33.11:635,33,0	1/1:22,0:22:54.11:823,54,0	1/1:15,0:14:28.71:445,29,0	1/1:13,0:13:39.10:619,39,0	1/1:16,0:16:45.15:695,45,0	1/1:14,0:14:36.12:744,36,0	1/1:15,0:15:36.06:749,36,0	1/1:12,0:12:24.08:378,24,0	1/1:21,0:21:24.02:370,24,0	1/1:12,0:12:15.05:269,15,0	1/1:10,0:10:9.03:124,9,0	1/1:10,0:10:18.06:255,18,0	1/1:16,0:16:42.09:600,42,0	1/1:14,0:14:36.12:708,36,0	1/1:11,0:11:30.09:440,30,0	1/1:3,0:3:9.03:158,9,0
chr10	63207367	.	A	AG	7246.64	PASS	AB=1.000;AC=54;AF=0.964;AN=56;BaseQRankSum=3.708;DP=371;FS=10.410;HRun=1;HaplotypeScore=201.9980;InbreedingCoeff=-0.0454;MQ=56.20;MQ0=1;MQRankSum=-5.053;QD=19.53;ReadPosRankSum=4.957;VQSLOD=3.7752;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,9:14:32.91:276,33,0	1/1:5,4:9:17.91:175,18,0	0/1:11,0:11:67.36:67,0,82	0/1:14,0:14:43.36:43,0,178	1/1:5,6:11:8.36:68,8,0	1/1:2,15:17:47.86:382,48,0	1/1:4,16:20:50.87:430,51,0	1/1:8,8:16:48.09:515,48,0	1/1:2,10:12:32.95:292,33,0	1/1:4,9:13:31.26:372,31,0	1/1:0,8:8:23.86:177,24,0	1/1:3,12:15:44.83:388,45,0	1/1:6,7:13:32.90:317,33,0	1/1:8,14:22:49.09:423,49,0	1/1:3,10:13:31.10:228,31,0	1/1:2,11:13:38.89:326,39,0	1/1:2,14:16:41.87:331,42,0	1/1:3,10:13:36.05:353,36,0	1/1:6,8:14:33.04:349,33,0	1/1:2,9:11:23.94:193,24,0	1/1:11,10:20:21.82:178,22,0	1/1:5,8:13:14.97:132,15,0	1/1:3,7:10:8.95:67,9,0	1/1:2,7:9:17.86:129,18,0	1/1:3,12:15:41.88:335,42,0	1/1:4,10:14:36.06:366,36,0	1/1:0,11:11:29.94:251,30,0	1/1:0,3:3:9.01:82,9,0
chr10	63207371	.	AC	A	2618.90	PASS	AB=0.636;AC=52;AF=0.929;AN=56;BaseQRankSum=3.357;DP=324;FS=7.402;HRun=7;HaplotypeScore=172.5440;InbreedingCoeff=0.3848;MQ=61.17;MQ0=4;MQRankSum=-4.379;QD=8.39;ReadPosRankSum=3.695;VQSLOD=0.3871;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,9:9:24.18:100,24,0	1/1:0,4:6:13.38:72,13,0	0/1:8,0:12:18.51:19,0,19	0/0:10,0:12:8.36:0,8,53	1/1:0,6:11:7.77:31,8,0	1/1:2,15:16:43.80:191,44,0	1/1:1,16:17:37.23:151,37,0	1/1:0,8:14:23.34:135,23,0	1/1:0,10:10:24.44:103,24,0	1/1:1,9:13:27.90:166,28,0	1/1:0,8:13:20.28:77,20,0	1/1:1,12:13:34.60:143,35,0	1/1:0,7:7:15.37:57,15,0	1/1:0,15:15:36.51:143,37,0	1/1:1,10:11:19.98:91,20,0	1/1:0,11:11:29.76:125,30,0	1/1:0,14:14:34.90:143,35,0	1/1:0,10:10:28.98:163,29,0	1/1:0,8:13:12.11:96,12,0	1/1:0,9:11:21.70:92,22,0	0/1:1,11:11:0.73:21,0,1	1/1:0,8:14:10.71:43,11,0	1/1:0,7:10:7.67:29,8,0	1/1:1,8:8:12.29:43,12,0	1/1:1,12:13:35.53:159,36,0	1/1:0,10:12:29.15:167,29,0	1/1:0,11:11:27.47:125,27,0	1/1:0,3:3:8.58:43,9,0
chr10	63207372	.	C	CA	3678.36	PASS	AB=1.000;AC=54;AF=0.964;AN=56;BaseQRankSum=2.810;DP=327;FS=10.008;HRun=1;HaplotypeScore=170.3770;InbreedingCoeff=0.1036;MQ=64.10;MQ0=4;MQRankSum=-5.274;QD=11.25;ReadPosRankSum=4.694;VQSLOD=1.3834;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,0:9:25.86:135,26,0	1/1:6,0:6:14.04:69,14,0	0/1:14,0:14:26.07:26,0,62	0/1:11,0:11:4.95:5,0,109	1/1:11,0:11:8.20:41,8,0	1/1:16,1:16:46.45:256,46,0	1/1:16,1:17:40.31:217,40,0	1/1:14,0:14:23.84:174,24,0	1/1:11,0:11:26.86:141,27,0	1/1:13,1:13:28.82:201,29,0	1/1:13,0:13:22.49:108,22,0	1/1:13,1:14:37.81:219,38,0	1/1:7,0:7:17.02:84,17,0	1/1:15,0:15:40.13:207,40,0	1/1:10,1:11:27.56:155,28,0	1/1:11,0:11:31.79:170,32,0	1/1:14,0:14:37.38:194,37,0	1/1:10,0:10:29.64:200,30,0	1/1:13,0:13:17.61:129,18,0	1/1:11,0:11:23.11:124,23,0	1/1:11,0:11:2.75:34,3,0	1/1:14,0:14:11.34:55,11,0	1/1:10,0:10:8.47:41,8,0	1/1:8,1:8:13.87:62,14,0	1/1:13,0:13:37.58:205,38,0	1/1:12,0:12:29.76:210,30,0	1/1:11,0:11:29.05:165,29,0	1/1:3,0:3:8.76:50,9,0
chr10	63207581	.	G	GC	5378.08	PASS	AC=50;AF=0.962;AN=52;DP=282;FS=0.000;HRun=1;HaplotypeScore=43.3884;InbreedingCoeff=0.2521;MQ=34.13;MQ0=0;QD=20.45;VQSLOD=4.7564;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,20:21:38.80:533,39,0	1/1:0,4:4:11.97:132,12,0	./.	./.	1/1:1,6:7:2.76:45,3,0	1/1:13,0:13:21.01:193,21,0	1/1:9,0:9:9.02:90,9,0	1/1:1,11:11:27.09:398,27,0	1/1:0,11:11:27.01:354,27,0	1/1:10,0:10:27.02:247,27,0	1/1:8,0:8:9.24:90,9,0	1/1:14,0:13:24.02:228,24,0	1/1:16,0:16:27.03:260,27,0	1/1:17,0:17:33.06:327,33,0	1/1:21,0:21:51.55:495,52,0	1/1:10,0:10:18.03:177,18,0	1/1:0,9:9:21.07:314,21,0	1/1:0,8:8:18.06:269,18,0	1/1:10,0:10:24.01:215,24,0	1/1:7,0:7:9.01:83,9,0	1/1:8,0:8:18.03:175,18,0	1/1:0,4:4:9.03:133,9,0	0/0:0,7:7:0:0,0,0	1/1:0,7:7:9.03:135,9,0	1/1:16,0:15:12.01:113,12,0	1/1:7,0:7:20.99:184,21,0	1/1:10,0:10:15.01:142,15,0	1/1:4,0:4:5.98:47,6,0
chr10	63207582	.	C	CT	6438.07	PASS	AB=1.000;AC=49;AF=0.907;AN=54;BaseQRankSum=-0.125;DP=293;FS=8.881;HRun=0;HaplotypeScore=41.0881;InbreedingCoeff=0.3706;MQ=34.66;MQ0=0;MQRankSum=-2.125;QD=23.76;ReadPosRankSum=2.887;VQSLOD=5.8378;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:21:34.07:279,34,0	1/1:4,0:4:7.76:54,8,0	./.	0/0:9,0:4:3.01:0,3,39	0/1:7,0:7:19.15:20,0,19	1/1:0,13:13:21.07:335,21,0	1/1:0,9:9:9.03:143,9,0	1/1:12,0:11:9.81:180,10,0	1/1:12,0:12:23.13:193,23,0	1/1:0,10:10:27.09:431,27,0	1/1:1,8:9:9.25:144,9,0	1/1:1,14:14:24.08:383,24,0	1/1:1,16:17:27.09:430,27,0	1/1:0,18:18:33.11:526,33,0	1/1:0,21:21:51.17:813,51,0	1/1:0,10:10:18.06:287,18,0	1/1:10,0:10:20.95:174,21,0	1/1:8,0:8:17.94:141,18,0	1/1:2,10:12:30.10:462,30,0	1/1:0,7:7:9.03:144,9,0	1/1:0,8:8:18.06:287,18,0	1/1:4,0:4:8.97:71,9,0	0/0:7,0:7:0:0,0,0	1/1:7,0:7:8.91:64,9,0	1/1:0,16:15:12.04:191,12,0	1/1:0,7:7:21.07:331,21,0	1/1:0,10:10:15.05:239,15,0	1/1:0,4:4:8.99:116,9,0
chr10	63207813	.	T	TCACACACA	2879.26	PASS	AB=0.816;AC=42;AF=0.750;AN=56;BaseQRankSum=-1.745;DP=480;FS=12.754;HRun=0;HaplotypeScore=162.8607;InbreedingCoeff=0.3574;MQ=50.16;MQ0=9;MQRankSum=0.080;QD=8.70;ReadPosRankSum=-0.835;VQSLOD=1.9474;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:14.13:0,14,705	1/1:5,0:5:3.01:43,3,0	0/0:42,0:10:2.98:0,3,22	0/0:30,0:12:4.99:0,5,25	0/0:9,0:8:5.82:0,6,74	1/1:10,0:10:5.53:53,6,0	1/1:19,0:18:12.77:112,13,0	1/1:27,0:28:47.94:705,48,0	0/0:30,0:30:2.22:0,2,482	1/1:5,0:5:11.95:138,12,0	1/1:3,0:3:6.01:74,6,0	1/1:18,0:18:4.61:105,5,0	1/1:15,0:15:12.01:217,12,0	1/1:12,0:11:2.99:25,3,0	1/1:24,0:22:5.12:97,5,0	1/1:12,0:13:14.42:200,14,0	0/1:16,0:18:37.05:267,0,37	0/1:9,0:12:67.67:264,0,68	1/1:15,0:15:23.90:275,24,0	1/1:8,0:8:3:27,3,0	1/1:53,0:52:2.53:26,3,0	0/1:12,0:10:0:0,0,0	1/1:6,0:6:3:25,3,0	0/1:5,16:22:0.40:0,0,0	1/1:12,0:12:3:26,3,0	1/1:12,0:10:17.87:167,18,0	1/1:6,0:7:11.38:133,11,0	1/1:2,0:2:3.01:47,3,0
chr10	63207833	.	ACG	A	1943.49	PASS	AB=0.897;AC=43;AF=0.796;AN=54;BaseQRankSum=4.076;DP=439;FS=1.745;HRun=0;HaplotypeScore=131.4109;InbreedingCoeff=0.4411;MQ=37.83;MQ0=10;MQRankSum=-1.682;QD=6.05;ReadPosRankSum=0.236;VQSLOD=3.4240;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:50.65:0,51,791	1/1:2,1:3:2.97:20,3,0	0/0:32,0:4:5.81:0,6,48	0/0:26,0:6:8.14:0,8,36	0/1:8,0:7:5.32:5,0,44	1/1:10,0:10:11.90:87,12,0	1/1:22,0:21:4.06:91,4,0	1/1:14,6:19:37.84:286,38,0	0/1:16,9:29:23.18:238,0,23	1/1:6,0:6:8.82:67,9,0	1/1:2,0:2:3.88:27,4,0	0/0:18,0:17:5.34:0,5,22	1/1:20,0:20:1.51:49,2,0	1/1:11,0:10:7.07:41,7,0	1/1:21,0:17:7.81:56,8,0	1/1:14,1:15:15.86:125,16,0	1/1:14,6:20:35.81:293,36,0	1/1:11,3:14:17.34:200,17,0	1/1:13,0:13:7.67:74,8,0	1/1:5,0:5:3:25,3,0	1/1:41,0:39:3.47:26,3,0	./.	1/1:7,0:7:0.81:1,1,0	0/1:14,0:14:0.02:0,0,0	1/1:11,0:11:0.88:2,1,0	1/1:14,1:13:28.62:195,29,0	1/1:11,0:11:19.62:112,20,0	1/1:3,0:3:8.96:69,9,0
chr10	63207837	.	ACACGCACACGCACACG	A	2253.50	PASS	AB=0.996;AC=28;AF=0.500;AN=56;BaseQRankSum=-1.656;DP=446;FS=0.000;HRun=0;HaplotypeScore=186.3164;InbreedingCoeff=-0.0357;MQ=37.97;MQ0=8;MQRankSum=-0.305;QD=7.72;ReadPosRankSum=-3.144;VQSLOD=1.8753;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:47.52:0,48,1889	1/1:4,0:4:3.46:24,3,0	0/0:28,0:4:9.02:0,9,209	0/0:25,0:6:10.27:0,10,174	0/0:8,0:7:5.95:0,6,66	0/1:10,0:10:67.50:82,0,68	0/1:21,0:20:8.95:9,0,301	0/1:25,0:24:99:302,0,100	1/1:24,8:32:2.80:1362,3,0	0/1:6,0:6:26.43:26,0,106	1/1:2,0:2:3:26,3,0	0/0:18,0:17:6.02:0,6,92	0/1:20,0:20:9.06:9,0,231	0/0:11,0:10:11.87:0,12,396	1/1:21,0:17:8.25:86,8,0	0/1:15,0:15:60.06:60,0,171	0/1:17,0:18:16.84:17,0,227	0/1:14,0:14:99:113,0,134	0/1:14,0:14:56.60:57,0,431	1/1:5,0:5:0.89:2,1,0	0/1:42,0:40:29.15:29,0,67	0/1:7,0:5:0.03:0,0,0	1/1:8,0:8:0.94:2,1,0	1/1:14,0:14:3.05:47,3,0	0/0:13,0:13:3.01:0,3,116	0/0:15,0:13:10.30:0,10,511	0/1:11,0:11:38.03:38,0,240	1/1:3,0:3:9.01:118,9,0
chr10	63207839	.	ACG	A	1823.16	PASS	AB=0.947;AC=39;AF=0.722;AN=54;BaseQRankSum=4.791;DP=442;FS=1.612;HRun=0;HaplotypeScore=135.9670;InbreedingCoeff=0.4165;MQ=38.50;MQ0=8;MQRankSum=-1.484;QD=5.79;ReadPosRankSum=1.752;VQSLOD=3.2660;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:53.58:0,54,797	1/1:3,1:4:1.20:20,1,0	0/0:24,0:4:9.03:0,9,130	0/0:24,0:6:6.41:0,6,74	0/0:8,0:7:5.99:0,6,79	1/1:10,0:10:11.86:80,12,0	0/1:20,0:19:2.87:46,0,3	1/1:19,5:23:33.27:264,33,0	0/1:32,0:32:55.13:116,0,55	1/1:5,0:5:8.91:65,9,0	1/1:2,0:2:3.47:28,3,0	0/0:19,0:18:5.34:0,5,22	1/1:19,0:19:3.07:47,3,0	1/1:11,0:10:7.01:39,7,0	1/1:21,0:17:10.92:76,11,0	1/1:15,0:15:15.86:124,16,0	1/1:14,1:19:38.60:287,39,0	0/1:13,1:16:12.27:217,0,12	1/1:12,0:12:6.55:71,7,0	1/1:6,0:6:3:25,3,0	1/1:44,0:42:6.41:44,6,0	./.	0/0:7,0:7:0.43:0,0,1	1/1:12,0:12:2.97:23,3,0	1/1:13,0:13:1.24:3,1,0	1/1:16,0:14:32.62:220,33,0	1/1:11,0:11:19.70:116,20,0	1/1:3,0:3:8.96:68,9,0
chr10	63207853	.	GCA	G	1422.30	PASS	AB=0.859;AC=25;AF=0.463;AN=54;BaseQRankSum=3.627;DP=441;FS=19.985;HRun=0;HaplotypeScore=137.7412;InbreedingCoeff=0.4698;MQ=52.72;MQ0=5;MQRankSum=-4.195;QD=6.03;ReadPosRankSum=3.947;VQSLOD=1.5640;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:53.84:0,54,877	0/0:4,0:4:6.02:0,6,103	0/0:20,0:12:35.98:0,36,555	0/0:21,0:15:39:0,39,626	0/0:7,0:6:6.01:0,6,98	1/1:7,3:10:8.36:101,8,0	0/1:10,12:21:44.20:91,0,44	0/0:24,0:23:55.50:0,55,747	1/1:27,0:27:6.55:93,7,0	1/1:1,8:9:12.48:127,12,0	0/1:2,0:2:0:0,0,0	0/0:20,3:22:5.34:0,5,22	0/1:13,5:18:8.03:53,0,8	0/1:11,2:12:2.33:111,0,2	1/1:9,14:20:5.43:48,5,0	1/1:10,3:13:11.81:129,12,0	0/0:18,0:18:41.43:0,41,439	0/0:14,0:14:38.09:0,38,393	1/1:11,2:13:10.20:269,10,0	./.	1/1:15,25:38:3.31:39,3,0	0/0:9,0:7:0:0,0,0	0/0:7,0:7:0.47:0,0,1	0/1:16,0:16:16.05:16,0,20	0/0:9,8:17:2.98:0,3,23	1/1:10,7:15:0.39:235,0,0	1/1:5,5:10:20.80:201,21,0	1/1:0,3:3:6.02:80,6,0
chr10	63207855	.	A	ACACACACG	1852.41	PASS	AB=1.000;AC=29;AF=0.558;AN=52;BaseQRankSum=2.125;DP=456;FS=8.103;HRun=0;HaplotypeScore=167.9898;InbreedingCoeff=0.6690;MQ=54.48;MQ0=4;MQRankSum=-3.037;QD=6.81;ReadPosRankSum=0.585;VQSLOD=1.8562;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:25.16:0,25,830	0/0:4,0:4:6.02:0,6,78	0/0:19,0:12:35.97:0,36,661	0/0:22,0:16:41.49:0,41,682	0/0:9,0:8:9.02:0,9,132	1/1:10,0:10:11.67:122,12,0	0/1:23,0:22:4.16:65,0,4	0/0:24,0:23:51.97:0,52,607	0/0:24,0:24:22.26:0,22,604	1/1:9,0:9:14.99:172,15,0	./.	1/1:5,1:27:1.56:6,2,0	1/1:8,8:21:11.22:166,11,0	1/1:13,0:12:13.76:83,14,0	1/1:23,0:19:5.66:89,6,0	1/1:14,0:14:14.33:198,14,0	0/0:21,0:21:40.50:0,41,619	0/0:14,0:14:33.49:0,33,463	1/1:14,0:14:33.11:528,33,0	./.	1/1:42,0:40:6:77,6,0	0/1:9,0:7:0:0,0,0	0/0:7,0:7:0.94:0,1,2	0/1:18,0:18:13.36:13,0,42	1/1:18,0:18:0.88:2,1,0	1/1:17,0:15:27.49:290,27,0	1/1:9,0:10:16.04:156,16,0	1/1:3,0:3:5.05:66,5,0
chr10	63207857	.	ACG	A	911.31	PASS	AB=0.997;AC=27;AF=0.500;AN=54;BaseQRankSum=5.798;DP=459;FS=0.000;HRun=0;HaplotypeScore=142.1068;InbreedingCoeff=0.3148;MQ=60.60;MQ0=4;MQRankSum=-4.408;QD=3.22;ReadPosRankSum=2.357;VQSLOD=2.7437;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:56.61:0,57,925	0/0:4,0:4:6.02:0,6,112	0/0:22,0:16:47.36:0,47,671	0/0:23,0:17:47.97:0,48,751	0/0:9,0:8:12.01:0,12,180	1/1:9,1:10:11.78:76,12,0	0/1:24,0:23:41.41:56,0,41	0/0:23,0:22:55.08:0,55,858	0/1:24,0:24:50.92:51,0,56	0/1:11,0:11:51.42:51,0,56	./.	0/0:23,0:22:4.96:0,5,22	0/1:20,0:20:12.93:17,0,13	1/1:13,0:12:5.09:48,5,0	0/1:24,0:20:12.96:13,0,21	0/1:14,0:14:7.14:47,0,7	0/0:20,0:20:47.51:0,48,547	0/0:12,0:12:35.58:0,36,443	1/1:14,0:14:8.95:95,9,0	0/0:7,0:7:2.95:0,3,19	0/1:43,1:42:22.01:31,0,22	1/1:9,0:7:2.99:25,3,0	1/1:9,0:9:2.73:23,3,0	1/1:21,0:21:20.93:189,21,0	1/1:17,0:17:0.88:2,1,0	1/1:13,3:14:34.07:216,34,0	1/1:10,0:10:13.15:114,13,0	1/1:3,0:3:5.88:36,6,0
chr10	63208311	.	A	AC	3194.90	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=11.557;DP=753;FS=14.949;HRun=1;HaplotypeScore=119.5404;InbreedingCoeff=0.9993;MQ=78.82;MQ0=0;MQRankSum=-2.893;QD=40.44;ReadPosRankSum=1.525;VQSLOD=1.7398;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:70,0:69:99:0,207,2725	0/0:9,0:9:27.09:0,27,377	0/0:25,0:25:72.22:0,72,948	0/0:19,0:19:50.74:0,51,651	0/0:17,0:17:51.15:0,51,681	0/0:29,0:29:87.28:0,87,1203	0/0:31,0:31:93.30:0,93,1283	0/0:27,0:27:78.26:0,78,1075	0/0:25,0:25:75.25:0,75,1042	0/0:26,0:26:75.23:0,75,1018	0/0:15,0:15:42.14:0,42,587	0/0:29,0:29:87.28:0,87,1201	0/0:25,0:25:75.24:0,75,1034	0/0:30,0:30:84.28:0,84,1174	0/0:23,0:23:63.17:0,63,819	0/0:23,0:23:69.23:0,69,962	0/0:27,0:27:78.26:0,78,1087	0/0:27,0:27:78.20:0,78,1049	0/0:30,0:30:87.26:0,87,1168	0/0:28,0:28:81.25:0,81,1099	0/0:62,0:62:99:0,183,2474	1/1:0,19:19:54.18:858,54,0	1/1:0,28:28:81.28:1284,81,0	1/1:1,31:32:75.26:1195,75,0	0/0:20,0:20:60.20:0,60,839	0/0:26,0:26:78.25:0,78,1072	0/0:22,0:22:66.20:0,66,892	0/0:9,0:9:27.09:0,27,377
chr10	63209372	.	CCT	C	871.54	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=0.564;DP=705;FS=2.754;HRun=0;HaplotypeScore=108.7626;InbreedingCoeff=0.9984;MQ=80.84;MQ0=0;MQRankSum=-0.610;QD=32.28;ReadPosRankSum=2.080;VQSLOD=5.4875;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,147,2615	0/0:10,0:10:30.10:0,30,540	0/0:21,0:21:60.15:0,60,991	0/0:20,0:19:47.21:0,47,761	0/0:31,0:31:90.31:0,90,1607	0/0:31,0:31:87.25:0,87,1464	0/0:25,0:25:69.22:0,69,1205	0/0:28,0:28:78.27:0,78,1400	1/1:2,25:26:69.23:966,69,0	0/0:35,0:35:99:0,105,1862	0/0:15,0:15:42.14:0,42,753	0/0:27,0:27:78.27:0,78,1405	0/0:24,0:24:66.23:0,66,1188	0/0:30,0:30:90.29:0,90,1572	0/0:23,0:23:69.22:0,69,1214	0/0:26,0:26:66.21:0,66,1159	0/0:28,0:28:84.29:0,84,1510	0/0:26,0:26:75.26:0,75,1351	0/0:17,0:17:42.12:0,42,714	0/0:18,0:18:51.16:0,51,889	0/0:37,0:37:99:0,108,1933	0/0:21,0:21:57.20:0,57,1026	0/0:24,0:24:63.18:0,63,1101	0/0:22,0:22:63.22:0,63,1134	0/0:19,0:19:53.85:0,54,920	0/0:39,0:39:99:0,114,2045	0/0:21,0:21:60.21:0,60,1080	0/0:9,0:9:27.09:0,27,486
chr10	63211613	.	GC	G	4006.10	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=-4.927;DP=299;FS=3.118;HRun=8;HaplotypeScore=39.9529;InbreedingCoeff=0.9280;MQ=74.49;MQ0=0;MQRankSum=-2.972;QD=20.97;ReadPosRankSum=3.127;VQSLOD=3.5290;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:24:55.34:0,55,298	0/0:3,0:3:6.02:0,6,72	0/0:12,0:12:29.75:0,30,322	0/0:5,0:5:12.03:0,12,138	0/0:3,0:8:11.59:0,12,64	1/1:1,10:11:27.04:261,27,0	1/1:5,16:21:15.17:292,15,0	0/0:9,0:9:27.08:0,27,326	0/0:2,0:7:8.63:0,9,44	1/1:1,8:9:24.02:226,24,0	1/1:1,6:7:21.03:201,21,0	1/1:1,10:11:21.02:203,21,0	1/1:3,12:15:33.05:318,33,0	1/1:2,8:10:24.04:231,24,0	1/1:3,14:17:33.04:319,33,0	1/1:1,5:6:12.02:116,12,0	0/0:11,0:11:24.06:0,24,279	0/0:11,0:11:27:0,27,275	1/1:5,14:19:39.03:372,39,0	1/1:0,9:9:21.03:203,21,0	1/1:4,21:25:54.08:522,54,0	0/0:1,0:6:11.50:0,12,58	0/0:1,0:4:5.85:0,6,35	0/0:1,0:8:20.13:0,20,102	1/1:2,4:6:12.01:116,12,0	1/1:1,8:9:24.04:232,24,0	1/1:1,10:11:29.99:280,30,0	1/1:0,5:5:12.02:116,12,0
chr10	63212126	.	CTT	C	18665.84	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=-2.343;DP=816;FS=2.988;HRun=2;HaplotypeScore=124.3926;InbreedingCoeff=0.9963;MQ=67.00;MQ0=2;MQRankSum=-2.550;QD=40.40;ReadPosRankSum=6.132;VQSLOD=4.9257;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:65,0:65:99:0,193,3568	0/0:19,0:19:57.20:0,57,1156	0/0:28,0:27:81.27:0,81,1488	0/0:23,0:19:45.16:0,45,878	0/0:25,0:25:75.26:0,75,1502	1/1:0,22:22:60.20:979,60,0	1/1:0,30:30:66.23:1077,66,0	0/0:47,0:47:99:0,135,2676	0/0:25,0:25:75.26:0,75,1500	1/1:0,28:28:84.26:1305,84,0	1/1:0,17:17:39.13:636,39,0	1/1:0,30:30:72.25:1174,72,0	1/1:0,28:28:72.25:1173,72,0	1/1:0,21:20:51.17:831,51,0	1/1:0,46:46:99:1760,108,0	1/1:0,36:36:93.32:1517,93,0	0/0:19,1:20:12.79:0,13,1031	0/0:15,0:15:45.15:0,45,904	1/1:1,20:21:40.19:840,40,0	1/1:0,20:20:51.17:832,51,0	1/1:0,69:68:99:2495,153,0	0/0:30,0:30:90.25:0,90,1746	0/0:32,0:32:96.29:0,96,1900	0/0:25,0:25:75.21:0,75,1460	1/1:0,24:24:63.22:1028,63,0	1/1:0,34:34:99:1612,99,0	1/1:0,23:23:51.17:832,51,0	1/1:0,13:13:36.12:576,36,0
chr10	63213174	.	GC	G	1514.45	PASS	AC=8;AF=0.148;AN=54;BaseQRankSum=9.636;DP=527;FS=0.560;HRun=2;HaplotypeScore=97.4038;InbreedingCoeff=0.9787;MQ=82.61;MQ0=0;MQRankSum=-10.443;QD=25.24;ReadPosRankSum=0.077;VQSLOD=3.2204;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,111,1602	1/1:0,5:5:15.04:167,15,0	0/0:13,0:13:39.10:0,39,548	0/0:18,0:18:51.16:0,51,710	0/0:5,0:5:12.04:0,12,180	0/0:29,0:29:84.27:0,84,1238	0/0:36,0:36:99:0,108,1597	1/1:2,13:15:39.50:456,39,0	0/0:17,0:17:51.16:0,51,729	0/0:12,0:12:33.05:0,33,446	./.	0/0:26,0:26:78.22:0,78,1102	0/0:14,0:14:39.13:0,39,581	0/0:26,0:26:78.26:0,78,1157	0/0:24,0:24:72.24:0,72,1079	0/0:14,0:14:39.13:0,39,585	1/1:5,16:21:40.29:473,40,0	1/1:3,16:19:48.10:575,48,0	0/0:24,0:24:72.18:0,72,1025	0/0:5,0:5:15.05:0,15,225	0/0:49,0:49:99:0,147,2140	0/0:9,0:9:27.09:0,27,404	0/0:9,0:9:21.07:0,21,314	0/0:47,0:47:99:0,138,2065	0/0:6,0:6:18.04:0,18,233	0/0:16,0:16:48.09:0,48,638	0/0:20,0:20:60.19:0,60,874	0/0:10,0:10:30.10:0,30,450
chr10	63213178	.	GCCA	G	1680.93	PASS	AC=8;AF=0.148;AN=54;BaseQRankSum=9.526;DP=546;FS=0.615;HRun=0;HaplotypeScore=119.9912;InbreedingCoeff=0.9825;MQ=83.38;MQ0=0;MQRankSum=-8.875;QD=27.56;ReadPosRankSum=0.249;VQSLOD=3.8923;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,114,2492	1/1:0,5:5:15.05:229,15,0	0/0:15,0:15:39.13:0,39,855	0/0:18,0:18:48.07:0,48,978	0/0:5,0:5:12.04:0,12,273	0/0:28,0:28:78.25:0,78,1726	0/0:35,0:35:99:0,102,2300	1/1:1,17:18:45.12:681,45,0	0/0:16,0:16:48.16:0,48,1106	0/0:15,0:15:39.06:0,39,698	./.	0/0:28,0:28:84.29:0,84,1901	0/0:14,0:14:39.13:0,39,892	0/0:27,0:27:81.26:0,81,1748	0/0:25,0:25:75.26:0,75,1713	0/0:13,0:13:39.13:0,39,899	1/1:6,13:19:30.06:457,30,0	1/1:8,11:19:30.10:472,30,0	0/0:24,0:24:69.24:0,69,1559	0/0:6,0:6:18.06:0,18,345	0/0:53,0:53:99:0,160,3507	0/0:9,0:9:27.09:0,27,600	0/0:10,0:10:27.09:0,27,591	0/0:47,0:47:99:0,135,3078	0/0:7,0:7:21.07:0,21,429	0/0:18,0:18:51.17:0,51,1117	0/0:21,0:21:54.19:0,54,1236	0/0:10,0:10:30.10:0,30,689
chr10	63213326	.	G	GTTATTCAAAT	9604.84	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-2.995;DP=683;FS=2.148;HRun=0;HaplotypeScore=199.0568;InbreedingCoeff=0.9997;MQ=79.87;MQ0=0;MQRankSum=-11.410;QD=117.13;ReadPosRankSum=-2.147;VQSLOD=4.8080;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,113,3849	1/1:1,9:12:30.10:1526,30,0	0/0:13,0:13:36.11:0,36,927	0/0:22,0:22:63.22:0,63,1899	0/0:28,0:28:78.25:0,78,2393	0/0:26,0:26:75.24:0,75,2254	0/0:34,0:34:99:0,99,2850	1/1:16,13:35:96.32:4178,96,0	0/0:31,0:31:90.29:0,90,2710	0/0:20,0:20:54.18:0,54,1641	0/0:14,0:14:39.13:0,39,1268	0/0:18,0:18:51.14:0,51,1512	0/0:26,0:26:69.24:0,69,2216	0/0:33,0:33:90.29:0,90,2786	0/0:30,0:30:84.29:0,84,2800	0/0:24,0:24:72.25:0,72,2236	1/1:10,9:20:48.16:2325,48,0	1/1:4,8:15:33.11:1575,33,0	0/0:22,0:22:60.21:0,60,1798	0/0:17,0:17:48.16:0,48,1601	0/0:22,0:22:60.21:0,60,1883	0/0:34,0:34:96.30:0,96,2910	0/0:19,0:19:57.20:0,57,1636	0/0:27,0:27:81.28:0,81,2634	0/0:21,0:21:60.19:0,60,1845	0/0:36,0:36:99:0,99,3100	0/0:25,0:25:72.25:0,72,2336	0/0:16,0:16:48.16:0,48,1517
chr10	63214983	.	GT	G	9847.01	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=0.085;DP=493;FS=38.948;HRun=10;HaplotypeScore=107.7150;InbreedingCoeff=0.9507;MQ=63.86;MQ0=0;MQRankSum=-4.515;QD=20.77;ReadPosRankSum=3.781;VQSLOD=3.0910;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,43:45:99:963,111,0	1/1:0,3:3:9:78,9,0	0/0:10,0:10:14.11:0,14,189	0/0:9,0:9:18:0,18,184	1/1:3,13:16:35.99:312,36,0	1/1:3,16:19:41.98:364,42,0	1/1:3,14:17:41.99:364,42,0	1/1:6,27:33:80.57:686,81,0	1/1:0,13:13:35.99:312,36,0	1/1:8,18:26:56.34:476,56,0	1/1:2,9:11:23.71:195,24,0	1/1:3,6:9:21.06:167,21,0	1/1:0,15:15:35.99:312,36,0	1/1:3,14:18:44.99:390,45,0	1/1:0,20:20:56.99:494,57,0	1/1:4,17:21:47.97:416,48,0	1/1:0,27:27:65.99:572,66,0	1/1:2,23:25:65.96:567,66,0	1/1:4,20:24:57.75:485,58,0	1/1:2,11:13:32.99:286,33,0	1/1:2,9:11:24.46:209,24,0	1/1:0,9:9:26.99:234,27,0	1/1:7,12:19:32.98:285,33,0	1/1:1,11:12:32.99:286,33,0	1/1:3,15:18:44.83:377,45,0	1/1:3,18:21:54.87:469,55,0	1/1:5,11:16:29.99:260,30,0	1/1:2,11:13:32.99:286,33,0
chr10	63215017	.	C	CTGTGTGTGTG	9456.28	PASS	AB=0.865;AC=42;AF=0.875;AN=48;BaseQRankSum=-0.278;DP=549;FS=8.498;HRun=0;HaplotypeScore=229.3604;InbreedingCoeff=0.6234;MQ=53.57;MQ0=4;MQRankSum=-4.429;QD=21.79;ReadPosRankSum=-2.214;VQSLOD=2.6816;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:45:53.23:0,53,1770	./.	0/1:19,0:11:0:0,0,0	./.	0/0:21,0:21:12.04:0,12,340	1/1:17,2:20:20.95:665,21,0	1/1:24,3:28:20.46:579,20,0	1/1:25,0:23:21.05:441,21,0	0/1:12,0:19:36.54:129,0,37	1/1:19,2:21:35.74:751,36,0	./.	1/1:9,1:11:8.96:92,9,0	1/1:15,0:17:23.65:359,24,0	1/1:15,6:21:21.05:708,21,0	1/1:19,4:24:9.01:223,9,0	1/1:16,6:23:21.07:822,21,0	1/1:25,0:26:27.05:770,27,0	1/1:24,2:25:25.42:479,25,0	1/1:24,1:23:18.03:340,18,0	1/1:11,1:12:6.02:262,6,0	1/1:23,0:21:15.01:284,15,0	./.	1/1:13,0:14:11.52:76,12,0	1/1:13,0:17:11.69:127,12,0	1/1:13,2:16:11.97:343,12,0	1/1:22,0:23:33:856,33,0	1/1:10,5:15:26.96:983,27,0	1/1:7,0:7:11.89:166,12,0
chr10	63216493	.	C	CTT	1966.19	PASS	AB=0.662;AC=35;AF=0.625;AN=56;BaseQRankSum=0.420;DP=522;FS=4.338;HRun=15;HaplotypeScore=88.4358;InbreedingCoeff=-0.1896;MQ=71.82;MQ0=1;MQRankSum=-1.431;QD=4.23;ReadPosRankSum=0.395;VQSLOD=-0.1005;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,9:19:19.29:206,19,0	1/1:2,0:7:9.61:34,10,0	0/0:33,0:17:21.47:0,21,180	0/0:24,0:15:11.81:0,12,108	1/1:9,6:18:5.27:210,5,0	0/1:7,1:18:33.42:59,0,33	0/1:4,0:12:7.08:31,0,7	0/1:17,1:25:43.85:56,0,44	0/1:16,0:16:14.04:14,0,133	1/1:7,5:15:23.30:161,23,0	0/1:6,1:17:22.72:70,0,23	0/1:14,0:18:13.77:59,0,14	0/1:5,0:14:10.67:11,0,15	0/1:1,0:9:1.73:4,0,2	0/1:5,1:18:10.37:51,0,10	0/1:10,0:18:19.03:19,0,25	0/1:17,2:35:55.48:111,0,55	1/1:6,0:13:9.49:34,9,0	1/1:10,0:21:14.26:135,14,0	0/1:9,1:26:2.98:197,0,3	0/1:4,0:9:0.19:0,0,39	1/1:3,3:20:13.93:168,14,0	1/1:6,8:17:10.48:92,10,0	0/1:5,0:13:9.74:10,0,43	0/1:6,1:21:38.93:107,0,39	1/1:6,0:20:20.96:78,21,0	0/1:13,0:22:11.63:110,0,12	0/1:6,2:21:38.92:105,0,39
chr10	63216917	.	TTTTTTTTTTTTTTG	T	450.46	PASS	AB=0.753;AC=3;AF=0.054;AN=56;BaseQRankSum=1.825;DP=596;FS=0.825;HRun=0;HaplotypeScore=187.9077;InbreedingCoeff=-0.0573;MQ=47.53;MQ0=34;MQRankSum=-0.469;QD=4.95;ReadPosRankSum=-1.427;VQSLOD=1.9642;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:21,29:48:99:380,0,134	0/0:5,0:5:12:0,12,182	0/0:36,0:5:7.21:0,7,54	0/0:36,0:5:9.02:0,9,92	0/1:10,15:24:99:158,0,103	0/0:18,0:17:48.15:0,48,910	0/0:11,0:11:8.99:0,9,82	0/0:30,0:28:34.98:0,35,1355	0/0:11,0:10:27.04:0,27,668	0/0:23,0:21:33.54:0,34,816	0/0:15,0:14:33.93:0,34,586	0/0:27,0:27:75.19:0,75,1478	0/0:12,0:12:33.10:0,33,679	0/0:17,0:16:47.82:0,48,942	0/0:20,0:18:51.14:0,51,1111	0/0:11,0:11:21.03:0,21,335	0/0:35,0:35:25.26:0,25,354	0/0:26,0:22:66.20:0,66,1718	0/0:25,0:21:52.10:0,52,954	0/0:16,0:15:39.13:0,39,823	0/0:15,0:14:36.12:0,36,830	0/0:16,0:15:33.09:0,33,527	0/0:17,0:16:44.05:0,44,755	0/1:16,0:15:1.37:1,0,274	0/0:15,0:15:41.30:0,41,757	0/0:32,0:30:81.02:0,81,1279	0/0:18,0:18:44.73:0,45,785	0/0:18,0:17:49.64:0,50,652
chr10	63216929	.	TTG	T	5908.53	PASS	AB=1.000;AC=53;AF=0.946;AN=56;BaseQRankSum=-2.228;DP=511;FS=0.000;HRun=0;HaplotypeScore=66.0235;InbreedingCoeff=0.4963;MQ=44.77;MQ0=23;MQRankSum=0.258;QD=12.08;ReadPosRankSum=0.729;VQSLOD=4.4775;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:42,0:41:19.20:103,19,0	1/1:3,0:3:8.95:70,9,0	0/0:22,0:2:0.89:0,1,2	0/1:24,0:2:0.82:1,0,2	1/1:21,0:20:23.68:156,24,0	1/1:15,0:15:37.30:248,37,0	1/1:9,0:9:2.22:7,2,0	1/1:27,0:25:61.26:417,61,0	1/1:11,0:10:10.32:106,10,0	1/1:19,0:17:41.15:282,41,0	1/1:14,0:13:31.49:224,31,0	1/1:23,0:23:56.80:405,57,0	1/1:12,1:13:35.73:268,36,0	1/1:15,0:14:33.36:234,33,0	1/1:18,1:17:38.20:295,38,0	1/1:13,0:13:29.16:230,29,0	1/1:30,0:30:4.28:21,4,0	1/1:29,0:25:75.52:577,76,0	1/1:22,0:19:47.44:332,47,0	1/1:14,0:13:23.54:152,24,0	1/1:14,0:13:32.65:236,33,0	1/1:10,2:11:24.64:168,25,0	1/1:14,0:13:31.65:209,32,0	1/1:16,2:18:26.85:206,27,0	1/1:13,0:13:34.06:221,34,0	1/1:26,0:25:62.32:413,62,0	1/1:15,0:15:27.93:192,28,0	1/1:14,0:14:23.22:139,23,0
chr10	63216930	.	TG	T	6289.47	PASS	AB=0.885;AC=53;AF=0.946;AN=56;BaseQRankSum=-2.231;DP=493;FS=0.000;HRun=1;HaplotypeScore=58.0066;InbreedingCoeff=0.5413;MQ=45.55;MQ0=18;MQRankSum=0.003;QD=13.33;ReadPosRankSum=1.065;VQSLOD=3.6967;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:39,0:38:19.49:107,19,0	1/1:3,0:3:8.95:69,9,0	0/0:18,2:2:0.89:0,1,2	0/1:20,3:2:0.96:1,0,2	1/1:18,0:17:23.68:156,24,0	1/1:15,0:15:37.90:251,38,0	1/1:0,9:9:2.04:6,2,0	1/1:27,0:26:70.07:471,70,0	1/1:10,0:9:22.50:175,22,0	1/1:2,15:17:41.02:274,41,0	1/1:14,0:13:33.70:231,34,0	1/1:23,0:23:56.73:404,57,0	1/1:13,0:13:35.68:267,36,0	1/1:14,0:14:38.17:273,38,0	1/1:21,0:19:48.39:357,48,0	1/1:12,0:12:27.75:214,28,0	1/1:4,26:30:8.14:34,8,0	1/1:30,0:26:79.22:583,79,0	1/1:4,16:18:47.40:332,47,0	1/1:13,1:13:29.86:188,30,0	1/1:14,0:13:32.66:238,33,0	1/1:11,0:10:26.72:193,27,0	1/1:11,0:11:32.38:219,32,0	1/1:17,1:18:26.84:202,27,0	1/1:12,1:13:37.52:254,38,0	1/1:23,0:22:61.45:423,61,0	1/1:14,0:14:29.32:197,29,0	1/1:12,1:13:27.45:170,27,0
chr10	63216945	.	T	TC	987.70	PASS	AC=8;AF=0.154;AN=52;BaseQRankSum=1.435;DP=471;FS=0.000;HRun=2;HaplotypeScore=66.0791;InbreedingCoeff=0.9396;MQ=47.83;MQ0=35;MQRankSum=2.656;QD=18.64;ReadPosRankSum=2.406;VQSLOD=3.6426;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:34:38.92:0,39,380	0/0:4,0:4:9.03:0,9,111	./.	./.	0/0:20,0:19:39.10:0,39,448	0/0:15,0:15:35.78:0,36,387	0/0:10,0:10:14.83:0,15,113	0/0:25,0:23:60.03:0,60,661	0/0:8,0:8:21.06:0,21,248	0/0:16,0:16:39.04:0,39,413	0/0:12,0:12:21.05:0,21,246	0/0:22,0:22:63.10:0,63,690	1/1:1,11:12:24.08:330,24,0	0/0:15,0:15:36.04:0,36,393	0/0:13,0:13:38.92:0,39,415	0/0:13,0:13:36.09:0,36,423	0/0:22,0:21:20.34:0,20,167	0/0:24,0:21:60.13:0,60,709	0/0:17,0:16:32.78:0,33,323	0/0:10,0:9:20.99:0,21,225	0/0:15,0:13:30.04:0,30,331	1/1:3,10:12:26.77:276,27,0	1/1:4,11:15:18.05:249,18,0	1/1:4,9:13:21.07:289,21,0	0/0:10,0:10:18.02:0,18,197	0/0:20,0:20:53.93:0,54,552	0/0:13,0:13:33.04:0,33,348	0/0:3,0:3:6.02:0,6,74
chr10	63217815	.	CT	C	8218.36	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=9.947;DP=695;FS=2.514;HRun=9;HaplotypeScore=116.1255;InbreedingCoeff=0.9820;MQ=72.00;MQ0=1;MQRankSum=-0.582;QD=23.02;ReadPosRankSum=-0.061;VQSLOD=4.0606;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,150,1703	0/0:16,0:16:36.11:0,36,415	0/0:25,0:21:27.69:0,28,379	0/0:22,1:21:4.84:0,5,277	0/0:19,0:19:51.15:0,51,588	1/1:1,14:15:36.01:330,36,0	1/1:1,31:32:84.05:769,84,0	0/0:29,0:29:50.63:0,51,814	0/0:19,0:19:54.16:0,54,621	1/1:4,31:35:93.05:850,93,0	1/1:2,20:22:60.01:543,60,0	1/1:3,20:23:60.03:549,60,0	0/0:20,0:20:57.17:0,57,654	1/1:3,18:21:51.03:467,51,0	1/1:4,17:21:42.02:384,42,0	1/1:1,23:24:60.03:549,60,0	0/0:34,0:34:96.28:0,96,1107	0/0:29,0:29:78.23:0,78,900	1/1:3,25:28:75.04:686,75,0	1/1:0,15:15:45.02:411,45,0	1/1:2,13:15:39.02:357,39,0	0/0:21,0:21:57.16:0,57,649	0/0:16,0:16:42.12:0,42,484	0/0:33,0:32:81.24:0,81,935	1/1:3,29:32:75.04:686,75,0	1/1:4,28:32:80.99:730,81,0	1/1:3,24:27:66.03:604,66,0	1/1:4,11:15:33.01:302,33,0
chr10	63218443	.	ATT	A	3801.09	PASS	AB=0.606;AC=27;AF=0.482;AN=56;BaseQRankSum=-1.401;DP=480;FS=8.310;HRun=15;HaplotypeScore=81.3694;InbreedingCoeff=0.6941;MQ=68.86;MQ0=2;MQRankSum=-3.494;QD=12.71;ReadPosRankSum=1.371;VQSLOD=2.4429;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,32:39:89.24:763,89,0	1/1:3,9:12:20.92:185,21,0	0/0:16,0:11:14.97:0,15,144	0/0:10,0:8:9.03:0,9,114	1/1:4,15:20:44.49:379,44,0	0/0:2,0:10:19.50:0,20,67	0/0:8,0:17:25.98:0,26,151	1/1:9,10:20:31.43:254,31,0	1/1:4,14:18:15.80:294,16,0	0/1:5,1:17:1.19:1,0,59	0/0:7,0:13:10.45:0,10,36	0/1:7,1:17:0.97:1,0,52	1/1:4,9:14:26.70:221,27,0	0/0:4,0:18:26.44:0,26,135	0/0:4,0:12:9.98:0,10,35	0/1:3,2:10:36.36:36,0,50	1/1:9,36:46:86.45:796,86,0	1/1:4,17:22:40.40:353,40,0	0/0:11,0:22:27.50:0,28,121	0/0:2,0:14:30.44:0,30,144	0/0:6,0:14:24.37:0,24,144	1/1:4,7:12:14.42:116,14,0	1/1:3,5:9:11.58:90,12,0	1/1:7,12:19:29.92:263,30,0	0/0:4,0:17:33.04:0,33,130	0/1:8,2:20:26.90:27,0,43	0/0:6,0:18:22.96:0,23,93	0/1:1,1:3:3.14:21,0,3
chr10	63218798	.	A	AC	4957.10	PASS	AB=0.727;AC=29;AF=0.518;AN=56;BaseQRankSum=3.324;DP=556;FS=3.294;HRun=2;HaplotypeScore=87.3289;InbreedingCoeff=0.8866;MQ=85.90;MQ0=1;MQRankSum=-2.126;QD=20.92;ReadPosRankSum=1.053;VQSLOD=4.8472;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,135,1722	0/0:11,0:11:15.76:0,16,111	0/0:20,0:20:51.13:0,51,618	0/0:17,0:19:28.64:0,29,468	0/0:16,0:16:48.16:0,48,621	1/1:4,10:14:13.99:214,14,0	1/1:7,21:28:48.99:597,49,0	0/0:25,0:25:40.57:0,41,441	0/0:26,0:26:75.17:0,75,951	1/1:2,12:14:42.13:508,42,0	1/1:2,4:6:3.01:39,3,0	1/1:4,18:22:33.01:408,33,0	0/0:20,0:20:57.14:0,57,698	1/1:0,16:17:17.63:329,18,0	1/1:3,17:20:20.86:394,21,0	1/1:4,7:11:18.49:222,18,0	0/0:48,0:48:99:0,104,459	0/0:34,0:34:81.42:0,81,359	1/1:3,5:8:18.01:204,18,0	1/1:1,5:6:11.67:122,12,0	1/1:5,34:39:78.23:951,78,0	0/0:12,0:12:33.08:0,33,413	0/0:10,0:10:30.10:0,30,385	0/0:32,0:32:96.31:0,96,1244	1/1:3,6:9:27.06:309,27,0	1/1:6,3:9:16.44:201,16,0	1/1:6,20:25:12.14:428,12,0	0/1:5,3:8:18.70:31,0,19
chr10	63218800	.	A	AC	8680.08	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=0.611;DP=561;FS=5.186;HRun=6;HaplotypeScore=79.2170;InbreedingCoeff=0.9224;MQ=83.95;MQ0=1;MQRankSum=-2.736;QD=24.25;ReadPosRankSum=-0.629;VQSLOD=4.2523;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,111,1130	1/1:1,10:11:30.10:377,30,0	0/0:16,0:16:13.77:0,14,311	0/0:19,0:19:23.06:0,23,369	0/0:16,0:16:42.08:0,42,422	1/1:14,0:14:18.94:225,19,0	1/1:28,0:28:52.03:621,52,0	1/1:7,19:26:43.86:563,44,0	0/0:30,0:30:73.29:0,73,709	1/1:15,0:15:39.12:482,39,0	1/1:6,0:6:3.90:39,4,0	1/1:21,0:21:33.10:407,33,0	0/0:19,0:19:51.11:0,51,517	1/1:19,0:19:35.82:386,36,0	1/1:17,0:17:26.37:399,26,0	1/1:11,0:11:18.53:224,19,0	1/1:3,46:49:99:1510,120,0	1/1:1,32:33:93.30:1170,93,0	1/1:10,0:10:18.01:206,18,0	1/1:6,0:6:8.99:111,9,0	1/1:37,0:37:81.24:992,81,0	0/0:12,0:12:35.71:0,36,331	0/0:10,0:10:24.05:0,24,245	0/0:33,0:33:93.18:0,93,940	1/1:12,0:12:30.06:334,30,0	1/1:10,0:10:14.49:185,14,0	1/1:25,0:24:9.32:411,9,0	1/1:8,0:8:3.01:37,3,0
chr10	63219401	.	G	GC	8448.77	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-8.040;DP=547;FS=5.659;HRun=8;HaplotypeScore=62.6935;InbreedingCoeff=0.9963;MQ=83.36;MQ0=0;MQRankSum=-1.561;QD=24.70;ReadPosRankSum=3.763;VQSLOD=5.7191;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:9,0:27:39.77:202,40,0	0/0:8,0:8:24:0,24,216	0/0:22,0:21:45.79:0,46,365	0/0:19,0:20:13.80:0,14,203	1/1:3,0:22:39.10:200,39,0	1/1:3,24:27:63.19:727,63,0	1/1:3,15:18:36.11:415,36,0	0/0:28,0:28:56.68:0,57,505	1/1:1,0:14:34.20:178,34,0	1/1:2,21:23:63.18:721,63,0	1/1:0,13:13:39.11:448,39,0	1/1:2,16:18:48.14:554,48,0	0/0:11,0:11:33:0,33,296	1/1:2,13:15:36.11:415,36,0	1/1:0,25:25:69.21:796,69,0	1/1:3,15:18:45.13:519,45,0	0/0:23,0:23:66:0,66,596	0/0:22,0:22:63.02:0,63,571	1/1:5,13:19:41.90:448,42,0	1/1:5,12:17:33.07:367,33,0	1/1:1,15:16:42.12:484,42,0	0/0:25,0:25:69.02:0,69,629	0/0:26,0:26:72:0,72,650	0/0:20,0:20:42.01:0,42,384	1/1:2,16:18:42.12:484,42,0	1/1:2,16:18:45.13:519,45,0	1/1:1,22:23:54.16:623,54,0	1/1:1,10:11:30.09:346,30,0
chr10	63221130	.	C	CAT	29293.97	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-2.933;DP=678;FS=5.211;HRun=0;HaplotypeScore=93.0239;InbreedingCoeff=0.9981;MQ=83.42;MQ0=0;MQRankSum=-6.756;QD=52.88;ReadPosRankSum=1.054;VQSLOD=5.1399;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,48:52:99:2559,126,0	1/1:0,7:7:21.07:426,21,0	0/0:21,0:21:62.99:0,63,952	0/0:23,0:23:69.13:0,69,1006	1/1:2,19:21:57.07:1035,57,0	1/1:0,9:10:21.07:426,21,0	1/1:4,23:27:69.24:1380,69,0	1/1:8,23:34:99:1976,102,0	1/1:1,26:27:78.27:1577,78,0	1/1:1,22:23:69.24:1382,69,0	1/1:2,9:11:27.05:507,27,0	1/1:2,27:30:75.26:1511,75,0	0/0:14,0:14:42.12:0,42,653	1/1:0,33:33:87.30:1765,87,0	1/1:0,33:33:90.31:1829,90,0	1/1:2,26:28:78.27:1579,78,0	1/1:0,26:29:75.26:1523,75,0	1/1:2,21:24:60.21:1212,60,0	1/1:2,15:17:45.15:912,45,0	1/1:1,14:15:45.07:826,45,0	1/1:2,57:62:99:3060,153,0	0/0:15,0:15:45.15:0,45,728	0/0:21,0:21:60.20:0,60,979	0/0:30,0:30:87.30:0,87,1418	1/1:2,16:19:42.14:845,42,0	1/1:2,16:18:54.16:1021,54,0	1/1:1,19:20:54.12:1090,54,0	1/1:0,14:14:42.14:853,42,0
chr10	63222312	.	AAAAG	A	3450.32	PASS	AB=0.989;AC=24;AF=0.429;AN=56;BaseQRankSum=1.956;DP=708;FS=7.871;HRun=0;HaplotypeScore=150.5776;InbreedingCoeff=-0.7881;MQ=63.37;MQ0=2;MQRankSum=0.402;QD=5.88;ReadPosRankSum=-1.070;VQSLOD=2.1281;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:46,0:46:99:265,0,234	0/1:7,0:7:42.83:43,0,73	0/0:27,0:22:48.13:0,48,846	0/0:22,0:18:45.07:0,45,686	0/1:21,0:21:29.03:228,0,29	0/0:35,0:35:2.34:0,2,1280	0/1:23,0:23:95.89:96,0,514	0/1:34,0:34:99:249,0,336	0/1:26,0:26:84.62:264,0,85	0/1:24,0:24:64.28:64,0,659	0/1:18,0:18:66.89:67,0,462	0/1:33,0:33:99:114,0,488	0/1:23,0:23:99:151,0,113	0/1:32,0:32:87.72:88,0,810	0/0:36,0:36:3.34:0,3,1263	0/1:27,0:27:99:150,0,686	0/1:24,0:24:99:236,0,110	0/1:10,0:10:74.51:75,0,103	0/1:12,7:19:99:199,0,123	0/1:25,0:25:82.74:83,0,713	0/1:16,0:16:49.83:50,0,505	0/1:19,0:19:80.96:206,0,81	0/1:26,0:26:99:222,0,139	0/1:33,0:33:99:193,0,148	0/1:18,0:18:42.82:43,0,546	0/1:28,0:28:67.72:68,0,777	0/1:35,0:35:99:267,0,625	0/1:20,0:20:30.79:31,0,723
chr10	63222318	.	A	ATG	425.79	PASS	AB=0.711;AC=1;AF=0.018;AN=56;BaseQRankSum=1.483;DP=696;FS=2.555;HRun=0;HaplotypeScore=140.5594;InbreedingCoeff=-0.0183;MQ=59.97;MQ0=2;MQRankSum=1.225;QD=13.31;ReadPosRankSum=-1.565;VQSLOD=3.0598;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:84.26:0,84,1231	0/0:7,0:7:21.03:0,21,286	0/0:26,0:17:48.16:0,48,761	0/0:22,0:17:47.98:0,48,689	0/0:23,0:23:48.12:0,48,666	0/0:34,0:34:76.70:0,77,644	0/0:23,0:23:42.02:0,42,387	0/0:35,0:35:90.27:0,90,1276	0/0:25,0:25:57.01:0,57,744	0/0:26,0:26:72.64:0,73,438	0/0:18,0:18:50.23:0,50,355	0/1:19,13:32:99:500,0,156	0/0:22,0:22:42.14:0,42,632	0/0:28,1:29:49.97:0,50,514	0/0:37,0:37:84.41:0,84,664	0/0:27,0:27:54.88:0,55,475	0/0:25,0:25:72.20:0,72,1037	0/0:11,0:11:33.11:0,33,489	0/0:19,0:18:46.98:0,47,300	0/0:24,0:24:69.16:0,69,486	0/0:18,0:18:47.27:0,47,309	0/0:19,0:19:42.06:0,42,545	0/0:25,0:25:60.16:0,60,867	0/0:31,0:31:57.18:0,57,845	0/0:18,0:18:42.04:0,42,309	0/0:23,0:23:39.57:0,40,379	0/0:38,0:38:37.72:0,38,601	0/0:19,0:19:56.72:0,57,446
chr10	63222319	.	AGAAT	A	5634.86	PASS	AB=0.784;AC=20;AF=0.357;AN=56;BaseQRankSum=-9.060;DP=694;FS=2.240;HRun=0;HaplotypeScore=146.2655;InbreedingCoeff=0.8604;MQ=59.69;MQ0=2;MQRankSum=1.781;QD=21.76;ReadPosRankSum=0.759;VQSLOD=4.4921;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,27:40:45.15:737,45,0	1/1:7,0:7:8.98:117,9,0	0/0:25,0:16:24.08:0,24,508	0/0:21,0:16:19.31:0,19,371	1/1:2,20:22:41.90:565,42,0	0/0:35,0:35:93.30:0,93,2162	0/0:22,0:22:51.10:0,51,990	1/1:14,20:34:60.12:804,60,0	0/1:6,19:25:30.17:596,0,30	0/0:28,0:28:69.15:0,69,1394	0/0:18,0:18:39.13:0,39,837	0/0:19,0:32:72.21:0,72,1187	1/1:6,16:22:24.08:393,24,0	0/0:28,0:29:66.19:0,66,1432	0/0:37,0:37:99:0,99,2210	0/0:28,0:28:57.18:0,57,1322	1/1:25,0:25:51.04:709,51,0	0/1:11,0:11:2.93:204,0,3	0/0:19,0:18:21:0,21,344	0/0:24,0:24:51.18:0,51,1221	0/0:18,0:18:42.11:0,42,897	1/1:4,15:19:27.09:428,27,0	1/1:8,15:23:33.04:540,33,0	1/1:10,21:31:33.11:540,33,0	0/0:18,0:18:39.13:0,39,903	0/0:24,0:24:57.19:0,57,1327	0/0:38,0:38:69.18:0,69,1402	0/0:19,0:19:45.15:0,45,1085
chr10	63222322	.	ATG	A	289.89	PASS	AB=0.926;AC=10;AF=0.179;AN=56;BaseQRankSum=14.796;DP=689;FS=4.043;HRun=0;HaplotypeScore=136.8906;InbreedingCoeff=-0.2088;MQ=59.89;MQ0=2;MQRankSum=-0.514;QD=1.33;ReadPosRankSum=5.722;VQSLOD=1.5868;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:38,0:38:14.15:14,0,403	0/1:4,2:6:24.55:25,0,47	0/0:24,0:16:45.15:0,45,777	0/0:23,0:18:48.63:0,49,786	0/1:22,0:22:13.95:14,0,147	0/0:34,0:34:99:0,102,2020	0/0:22,0:22:66.23:0,66,1259	0/0:30,0:30:13.31:0,13,481	0/1:24,0:24:28.63:29,0,157	0/0:29,0:29:87.30:0,87,1673	0/0:18,0:18:54.16:0,54,979	0/0:31,0:31:93.30:0,93,1446	0/1:22,0:22:7.18:7,0,232	0/0:29,0:29:87.30:0,87,1620	0/0:36,0:36:99:0,108,2142	0/0:31,0:31:90.31:0,90,1665	0/1:15,9:24:81.50:232,0,81	0/1:10,3:13:66.33:66,0,128	0/0:21,0:20:57.19:0,57,969	0/0:24,0:24:69.24:0,69,1298	0/0:19,0:19:57.15:0,57,1063	0/1:17,0:17:13.23:13,0,113	0/1:23,0:23:10.93:11,0,289	0/1:28,1:29:20.14:20,0,222	0/0:16,0:16:45.15:0,45,880	0/0:24,0:24:72.25:0,72,1393	0/0:38,0:38:99:0,114,2074	0/0:22,0:22:66.23:0,66,1266
chr10	63222325	.	AAT	A	305.17	PASS	AB=0.925;AC=10;AF=0.179;AN=56;BaseQRankSum=14.790;DP=675;FS=3.412;HRun=0;HaplotypeScore=133.8985;InbreedingCoeff=-0.2119;MQ=59.94;MQ0=2;MQRankSum=0.082;QD=1.45;ReadPosRankSum=6.712;VQSLOD=2.0343;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:37,0:37:16.92:17,0,383	0/1:4,2:6:24.42:24,0,48	0/0:24,0:16:45.15:0,45,787	0/0:23,0:18:51.59:0,52,828	0/1:21,0:21:13.50:14,0,136	0/0:35,0:35:99:0,102,2004	0/0:24,0:24:72.25:0,72,1356	0/0:29,0:29:15.42:0,15,459	0/1:23,0:23:28.46:28,0,158	0/0:30,0:30:88.54:0,89,1683	0/0:16,0:16:48.16:0,48,940	0/0:29,0:29:87.29:0,87,1378	0/1:21,0:21:10:10,0,191	0/0:26,0:26:78.27:0,78,1491	0/0:35,0:35:99:0,105,2081	0/0:30,0:30:90.30:0,90,1663	0/1:16,9:25:94.34:228,0,94	0/1:9,3:12:71.59:72,0,107	0/0:21,0:20:51.17:0,51,898	0/0:22,0:22:66.18:0,66,1232	0/0:20,0:20:60.21:0,60,1132	0/1:17,0:17:12.54:13,0,114	0/1:21,0:21:16.56:17,0,183	0/1:26,1:27:26:26,0,144	0/0:17,0:17:48.16:0,48,923	0/0:25,0:25:75.25:0,75,1422	0/0:37,0:37:99:0,111,2065	0/0:22,0:22:66.23:0,66,1270
chr10	63222577	.	GGTGTGTGTGTGT	G	1595.45	PASS	AB=0.929;AC=22;AF=0.440;AN=50;BaseQRankSum=3.030;DP=478;FS=10.223;HRun=0;HaplotypeScore=163.7820;InbreedingCoeff=0.5060;MQ=64.07;MQ0=25;MQRankSum=-2.355;QD=8.44;ReadPosRankSum=2.192;VQSLOD=1.4771;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:27:15.05:0,15,687	0/0:5,0:4:3.01:0,3,63	0/0:24,0:16:5.91:0,6,59	0/0:30,0:22:2.04:0,2,6	0/0:21,0:20:15.05:0,15,531	1/1:13,4:18:24.02:543,24,0	1/1:21,0:21:3:25,3,0	0/0:14,0:13:12.04:0,12,364	0/0:20,0:16:9.03:0,9,467	0/1:15,3:16:6.98:164,0,7	0/0:8,1:10:0.47:0,0,1	0/0:12,0:10:3.47:0,3,26	0/1:14,0:13:52.18:52,0,52	1/1:9,1:12:2.50:29,3,0	1/1:15,2:16:3.01:71,3,0	1/1:10,1:12:9.03:224,9,0	0/0:25,0:22:21.54:0,22,537	0/0:15,0:15:15.05:0,15,512	1/1:13,1:14:6.02:199,6,0	./.	1/1:24,2:20:2.99:25,3,0	0/0:16,0:14:9.03:0,9,376	./.	0/0:34,0:30:15.05:0,15,674	1/1:9,0:8:2.97:20,3,0	1/1:12,3:15:6.02:150,6,0	1/1:9,0:10:7.24:255,7,0	./.
chr10	63222713	.	AGT	A	3755.96	PASS	AB=0.531;AC=37;AF=0.685;AN=54;BaseQRankSum=-5.771;DP=564;FS=4.529;HRun=0;HaplotypeScore=79.1431;InbreedingCoeff=0.8859;MQ=61.97;MQ0=20;MQRankSum=-0.375;QD=10.46;ReadPosRankSum=2.139;VQSLOD=3.1424;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:27:23.87:0,24,182	0/0:4,0:4:8.99:0,9,75	0/0:35,0:18:51.04:0,51,514	0/0:44,0:22:50.91:0,51,520	0/0:20,0:18:29.97:0,30,254	1/1:29,0:28:41.68:334,42,0	1/1:31,0:28:24.18:301,24,0	0/0:23,0:23:65.81:0,66,547	1/1:20,0:19:14.68:110,15,0	1/1:21,0:20:39.05:366,39,0	1/1:15,0:14:26.96:222,27,0	1/1:16,0:12:20:155,20,0	1/1:13,0:13:0.35:73,0,0	1/1:25,0:23:16.78:124,17,0	1/1:20,0:19:20.59:176,21,0	1/1:17,0:16:17.43:157,17,0	0/0:12,0:12:22.02:0,22,147	0/0:10,0:5:5.98:0,6,47	1/1:20,0:19:35.76:308,36,0	1/1:13,0:12:23.43:195,23,0	1/1:24,0:17:17.78:144,18,0	1/1:15,0:15:20.76:168,21,0	0/1:2,15:17:0:0,0,0	./.	1/1:15,0:14:29.82:259,30,0	1/1:17,0:15:15.74:235,16,0	1/1:14,0:13:14.16:208,14,0	1/1:17,0:17:26.95:219,27,0
chr10	63222715	.	T	TGA	644.58	PASS	AB=1.000;AC=25;AF=0.446;AN=56;BaseQRankSum=1.426;DP=475;FS=2.108;HRun=0;HaplotypeScore=84.8894;InbreedingCoeff=0.3015;MQ=71.85;MQ0=16;MQRankSum=-1.949;QD=2.71;ReadPosRankSum=-2.155;VQSLOD=1.4149;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:23:3.37:0,3,24	0/0:4,0:4:1.55:0,2,4	0/0:37,0:20:53.87:0,54,803	0/0:47,0:25:54.69:0,55,735	1/1:15,0:15:1.86:19,2,0	0/1:26,0:26:0:0,0,1	0/1:24,0:23:10.94:11,0,11	0/0:23,0:23:1.83:0,2,18	0/0:16,0:16:0.86:0,1,2	0/1:14,0:14:2.78:18,0,3	0/1:11,0:10:0.07:1,0,0	0/0:11,0:9:3.59:0,4,10	1/1:6,0:6:14.91:147,15,0	0/0:16,0:15:5.12:0,5,25	1/1:11,0:10:2.49:11,2,0	0/1:11,0:11:8.10:36,0,8	0/0:12,0:12:4.41:0,4,26	0/0:11,0:7:3.93:0,4,25	1/1:19,0:18:9.34:98,9,0	1/1:13,0:12:6.73:50,7,0	1/1:17,0:10:1.15:22,1,0	1/1:14,0:14:21.06:328,21,0	0/1:15,0:15:0:0,0,0	0/0:8,12:18:0:0,0,0	1/1:14,0:14:0.95:3,1,0	0/1:16,0:14:18.24:19,0,18	1/1:12,0:11:1.12:23,1,0	0/0:11,0:11:1.34:0,1,3
chr10	63223565	.	T	TG	2931.44	PASS	AB=1.000;AC=48;AF=0.857;AN=56;BaseQRankSum=-2.740;DP=532;FS=147.012;HRun=3;HaplotypeScore=122.3240;InbreedingCoeff=0.5828;MQ=74.32;MQ0=2;MQRankSum=-1.799;QD=6.25;ReadPosRankSum=-2.001;VQSLOD=-0.2049;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:46.62:0,47,154	1/1:7,0:7:8.17:48,8,0	0/1:10,0:8:17.09:17,0,70	0/0:14,0:14:22.61:0,23,198	0/0:16,0:15:15.54:0,16,51	1/1:19,1:20:20.87:97,21,0	1/1:36,0:36:36.32:179,36,0	1/1:17,0:17:21.70:183,22,0	1/1:17,1:17:5.87:36,6,0	1/1:12,0:12:23.70:143,24,0	1/1:15,0:15:6.08:20,6,0	1/1:20,0:20:29.86:167,30,0	1/1:12,2:14:19.40:161,19,0	1/1:20,0:20:11.26:161,11,0	1/1:25,0:25:13.33:170,13,0	1/1:14,0:14:17.33:114,17,0	1/1:32,1:33:2.78:151,3,0	1/1:25,0:25:18.05:169,18,0	1/1:15,0:15:24.14:152,24,0	1/1:14,0:14:6.66:149,7,0	1/1:38,0:37:49.04:284,49,0	1/1:17,0:17:26.41:146,26,0	1/1:7,0:7:4.23:27,4,0	1/1:28,0:28:24.26:137,24,0	1/1:16,0:16:12.58:64,13,0	1/1:18,1:19:27.42:146,27,0	0/1:15,0:15:1.94:46,0,2	1/1:13,0:13:19.76:115,20,0
chr10	63223568	.	GCC	G	715.72	PASS	AB=0.958;AC=7;AF=0.125;AN=56;BaseQRankSum=-6.061;DP=516;FS=0.580;HRun=12;HaplotypeScore=132.9947;InbreedingCoeff=0.4407;MQ=73.99;MQ0=2;MQRankSum=0.540;QD=8.23;ReadPosRankSum=-1.524;VQSLOD=1.2463;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,24:31:63.10:641,63,0	0/1:7,0:7:5.03:5,0,24	0/0:10,0:7:11.97:0,12,121	0/0:14,0:14:14.78:0,15,135	1/1:3,11:15:14.27:177,14,0	0/0:19,0:20:7.25:0,7,166	0/0:34,0:35:72.08:0,72,374	0/0:13,0:14:5.37:0,5,115	0/0:4,0:16:6.01:0,6,67	0/0:10,0:11:10.64:0,11,48	0/0:13,0:13:27.51:0,28,129	0/0:17,0:17:22.46:0,22,113	0/0:14,0:14:24.34:0,24,140	0/0:19,0:20:46.04:0,46,282	0/0:24,0:25:52.67:0,53,340	0/0:15,0:15:10.62:0,11,112	0/0:33,0:33:54.61:0,55,482	0/0:25,0:25:52.80:0,53,290	0/1:12,0:14:19.81:20,0,29	0/0:13,0:14:21.76:0,22,168	0/0:38,0:37:69.79:0,70,330	0/0:16,0:16:32.78:0,33,160	0/0:6,0:6:12.12:0,12,90	0/0:29,0:29:49.61:0,50,311	0/0:15,0:15:29.41:0,29,157	0/1:19,0:19:0.54:1,0,151	0/0:14,0:15:30.73:0,31,256	0/0:12,0:12:0.81:0,1,52
chr10	63224053	.	CTTTTGTTTTTGT	C	434.45	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.009;DP=585;FS=1.226;HRun=0;HaplotypeScore=239.6088;InbreedingCoeff=0.7911;MQ=47.65;MQ0=19;MQRankSum=-3.218;QD=33.42;ReadPosRankSum=1.351;VQSLOD=2.9115;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:50.39:0,50,1481	0/0:7,0:7:12.04:0,12,532	0/0:59,0:14:4.34:0,4,425	0/0:41,0:11:12.51:0,13,320	0/0:31,0:31:66.09:0,66,2190	0/0:21,0:20:45.15:0,45,1369	0/0:14,0:14:23.54:0,24,914	0/0:24,0:22:36.11:0,36,1271	1/1:5,8:13:18.02:525,18,0	0/0:22,0:22:49.88:0,50,1587	0/0:20,0:20:48.13:0,48,1197	0/0:15,0:14:40:0,40,1198	0/0:10,0:10:23.25:0,23,715	0/0:11,0:11:23.92:0,24,601	0/0:17,0:17:31.90:0,32,1072	0/0:13,0:13:27.09:0,27,774	0/0:31,0:30:63.21:0,63,2242	0/0:21,0:20:22.62:0,23,1325	0/0:20,0:18:33.10:0,33,1036	0/0:17,0:16:39.09:0,39,1156	0/0:10,0:10:18.77:0,19,308	0/0:20,0:20:51.14:0,51,1485	0/0:22,0:22:30.92:0,31,1690	0/0:9,0:8:12.04:0,12,341	0/0:24,0:24:56.98:0,57,2021	0/0:18,0:18:44.18:0,44,1526	0/0:21,0:20:41.09:0,41,1105	0/0:23,0:23:66.05:0,66,2258
chr10	63224082	.	GT	G	8807.57	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=1.217;DP=571;FS=15.678;HRun=9;HaplotypeScore=99.0433;InbreedingCoeff=0.9358;MQ=61.10;MQ0=5;MQRankSum=2.558;QD=19.70;ReadPosRankSum=4.066;VQSLOD=3.9430;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:71.93:0,72,722	1/1:0,9:9:27.01:247,27,0	0/0:24,0:12:20.66:0,21,197	0/0:25,0:14:8.70:0,9,135	0/0:32,0:33:73.10:0,73,769	1/1:4,15:19:45.02:412,45,0	1/1:2,11:13:27.01:247,27,0	1/1:5,24:29:71.93:659,72,0	0/0:10,0:10:11.74:0,12,84	1/1:6,15:21:48.02:439,48,0	1/1:4,15:19:39:356,39,0	1/1:3,14:17:39.02:357,39,0	1/1:3,12:15:33.01:302,33,0	1/1:4,12:16:27:247,27,0	1/1:2,17:19:48.02:439,48,0	1/1:2,14:16:38.69:356,39,0	1/1:6,31:36:81.01:741,81,0	1/1:7,16:22:35.97:329,36,0	1/1:5,14:19:39.02:357,39,0	1/1:5,13:18:35.99:328,36,0	1/1:3,4:7:2.96:27,3,0	1/1:6,18:24:48.02:439,48,0	1/1:6,19:25:48.01:439,48,0	1/1:0,15:15:33.02:301,33,0	1/1:4,19:23:54:494,54,0	1/1:6,17:23:51.02:467,51,0	1/1:7,13:20:32.83:301,33,0	1/1:1,19:20:57.03:522,57,0
chr10	63224230	.	A	AC	4128.29	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=9.889;DP=665;FS=8.857;HRun=5;HaplotypeScore=73.9915;InbreedingCoeff=0.9981;MQ=86.39;MQ0=0;MQRankSum=-1.468;QD=35.90;ReadPosRankSum=-0.034;VQSLOD=3.0330;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,138,1472	1/1:1,8:9:21.03:258,21,0	0/0:22,0:22:54.12:0,54,580	0/0:24,0:24:51.12:0,51,544	0/0:18,0:18:51.13:0,51,547	0/0:19,0:19:45.11:0,45,484	0/0:23,0:23:66.15:0,66,701	1/1:3,24:27:72.18:912,72,0	0/0:16,0:16:42.10:0,42,451	0/0:19,0:19:51.13:0,51,548	0/0:13,0:13:30.07:0,30,322	0/0:21,0:21:57.13:0,57,604	0/0:27,0:27:75.17:0,75,797	0/0:20,0:20:57.14:0,57,611	0/0:21,0:21:57.13:0,57,604	0/0:18,0:18:48.10:0,48,508	1/1:2,50:52:99:1972,150,0	1/1:0,27:27:75.24:986,75,0	0/0:20,0:20:48.11:0,48,509	0/0:21,0:21:54.13:0,54,578	0/0:46,0:46:99:0,123,1322	0/0:16,0:16:45.11:0,45,483	0/0:14,0:14:42.11:0,42,451	0/0:44,0:44:99:0,126,1354	0/0:21,0:21:60.14:0,60,636	0/0:26,0:26:71.99:0,72,766	0/0:18,0:18:36.08:0,36,387	0/0:9,0:9:24.01:0,24,258
chr10	63224764	.	GGTGT	G	1431.44	PASS	AB=0.735;AC=7;AF=0.125;AN=56;BaseQRankSum=5.472;DP=625;FS=0.674;HRun=0;HaplotypeScore=105.9798;InbreedingCoeff=0.4236;MQ=52.82;MQ0=39;MQRankSum=-6.479;QD=15.23;ReadPosRankSum=0.657;VQSLOD=3.3035;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:19:33.11:0,33,736	1/1:3,0:3:6.02:103,6,0	0/0:40,0:4:8.93:0,9,65	0/0:33,0:3:5.98:0,6,63	0/0:8,0:9:23.87:0,24,515	0/0:20,0:21:28.36:0,28,1049	0/0:38,0:34:75.25:0,75,1765	0/1:22,13:29:99:476,0,137	1/1:9,13:20:39.13:648,39,0	0/0:26,0:24:63.22:0,63,1534	0/0:9,0:9:15.05:0,15,377	0/0:29,0:27:66.23:0,66,1589	0/0:23,0:22:56.90:0,57,1242	0/0:25,0:24:48.14:0,48,1038	0/0:22,0:22:42.14:0,42,1049	0/0:14,0:15:32.90:0,33,738	0/1:14,9:24:99:161,0,117	0/1:7,3:9:64.12:179,0,64	0/0:14,0:9:24.07:0,24,521	0/0:14,0:15:36.12:0,36,869	0/0:87,0:71:99:0,138,3378	0/0:9,0:9:23.85:0,24,479	0/0:14,0:13:33.10:0,33,744	0/0:30,0:31:59.99:0,60,1373	0/0:12,0:12:30.08:0,30,688	0/0:18,0:16:32.69:0,33,654	0/0:9,0:7:21.07:0,21,471	0/0:11,0:10:12.04:0,12,264
chr10	63224802	.	GGT	G	40.06	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=4.871;DP=607;FS=0.000;HRun=0;HaplotypeScore=93.9491;InbreedingCoeff=0.7306;MQ=49.36;MQ0=37;MQRankSum=-3.300;QD=2.23;ReadPosRankSum=-2.871;VQSLOD=1.3540;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:26:44.74:0,45,702	1/1:4,2:6:8.77:69,9,0	0/0:38,0:4:8.91:0,9,87	0/0:44,0:8:8.05:0,8,80	0/0:14,0:14:30.07:0,30,444	0/0:20,0:19:34.60:0,35,540	0/0:39,0:34:72.21:0,72,1098	0/0:8,0:4:5.17:0,5,22	0/0:12,0:12:21.07:0,21,346	0/0:32,0:27:54.18:0,54,847	0/0:8,0:8:12.04:0,12,195	0/0:23,0:22:31.35:0,31,540	0/0:20,0:18:36.09:0,36,561	0/0:17,0:16:30.10:0,30,492	0/0:22,0:21:42.14:0,42,675	0/0:17,0:17:25.55:0,26,417	1/1:9,3:10:8.97:76,9,0	0/0:6,0:6:2.97:0,3,20	0/0:31,0:19:47.15:0,47,685	0/0:20,0:20:37.14:0,37,582	0/0:85,1:73:87.15:0,87,1389	0/0:13,0:12:27.09:0,27,437	0/0:11,0:10:27.09:0,27,444	0/0:28,0:27:53.67:0,54,836	0/0:9,0:8:15.05:0,15,247	0/0:24,0:22:49.71:0,50,730	0/0:9,0:9:21.05:0,21,320	0/0:7,0:7:21.07:0,21,333
chr10	63224821	.	G	GGT	618.17	PASS	AB=0.969;AC=10;AF=0.179;AN=56;BaseQRankSum=6.028;DP=660;FS=14.624;HRun=0;HaplotypeScore=134.7503;InbreedingCoeff=0.4377;MQ=45.34;MQ0=28;MQRankSum=-6.056;QD=5.62;ReadPosRankSum=-4.648;VQSLOD=0.5031;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:58.68:0,59,718	1/1:6,2:8:14.97:192,15,0	0/0:56,0:12:18.98:0,19,218	0/0:66,0:10:17.89:0,18,186	0/0:16,0:16:30.10:0,30,381	0/1:23,1:22:34.86:35,0,235	0/0:32,2:32:51.32:0,51,632	0/1:16,0:12:17.20:155,0,17	0/0:14,0:14:36.04:0,36,409	0/0:29,0:25:40.22:0,40,478	0/0:6,0:6:9.91:0,10,116	0/0:27,0:25:9.42:0,9,321	0/0:16,0:16:24.07:0,24,304	0/1:20,1:20:16:16,0,314	0/0:27,0:27:36.11:0,36,459	0/0:18,0:18:1.11:0,1,244	1/1:6,6:11:11.74:242,12,0	1/1:2,2:4:9.01:124,9,0	0/1:24,0:21:6.28:6,0,366	0/0:20,0:20:36.04:0,36,408	0/0:76,0:63:56.77:0,57,694	0/0:12,0:12:30.10:0,30,381	0/0:12,0:11:12.04:0,12,153	0/0:30,1:30:50.90:0,51,594	0/0:13,0:13:15.04:0,15,182	0/0:25,0:24:20.12:0,20,471	0/0:12,0:12:24.51:0,25,286	0/0:7,0:7:18.06:0,18,228
chr10	63224836	.	G	GGT	757.24	PASS	AB=0.972;AC=26;AF=0.565;AN=46;BaseQRankSum=-1.037;DP=683;FS=3.164;HRun=0;HaplotypeScore=134.3978;InbreedingCoeff=0.2589;MQ=44.49;MQ0=26;MQRankSum=-0.024;QD=1.97;ReadPosRankSum=-0.297;VQSLOD=2.6241;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:27,5:34:8.44:39,0,8	0/0:9,0:9:8.52:0,9,42	./.	./.	1/1:13,3:16:6.02:90,6,0	1/1:23,0:21:7.46:42,7,0	0/1:41,0:39:1.92:109,0,2	1/1:20,0:15:1.25:3,1,0	1/1:10,7:20:18.04:232,18,0	1/1:25,0:21:2.76:60,3,0	0/0:5,0:4:2.22:0,2,7	1/1:28,0:27:2.96:19,3,0	0/0:14,0:14:8.30:0,8,38	1/1:23,0:22:14.76:94,15,0	1/1:30,0:30:4.12:83,4,0	0/1:23,0:22:11.97:28,0,12	0/0:15,0:14:13.23:0,13,61	0/0:8,0:7:8.01:0,8,31	1/1:24,0:21:3.11:14,3,0	0/1:21,0:21:8.15:10,0,8	0/0:74,0:64:6.25:0,6,27	./.	./.	0/0:34,0:33:2.71:0,3,14	1/1:17,0:17:5.39:33,5,0	0/1:26,0:25:7.72:8,0,19	0/1:13,0:13:6.76:40,0,7	./.
chr10	63224864	.	TGTGTGTGTGTGA	T	6676.25	PASS	AB=0.948;AC=33;AF=0.589;AN=56;BaseQRankSum=3.945;DP=640;FS=9.910;HRun=0;HaplotypeScore=160.1693;InbreedingCoeff=0.3860;MQ=53.45;MQ0=15;MQRankSum=-2.678;QD=15.28;ReadPosRankSum=2.041;VQSLOD=3.3510;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:56.95:0,57,1408	0/0:9,0:9:14.46:0,14,191	0/0:35,0:17:45.13:0,45,775	0/0:42,0:21:38.59:0,39,770	0/0:17,0:17:41.67:0,42,1221	1/1:5,18:22:12.69:360,13,0	1/1:4,27:31:27.09:861,27,0	0/1:31,0:29:99:201,0,433	0/0:21,0:21:47.97:0,48,868	1/1:16,4:19:24.41:885,24,0	1/1:4,0:4:10.57:211,11,0	1/1:5,30:33:3.43:170,3,0	0/1:13,0:13:71.80:72,0,137	1/1:5,18:21:14.41:518,14,0	1/1:8,21:28:20.88:613,21,0	1/1:6,20:25:14.84:378,15,0	0/1:24,0:22:99:119,0,143	0/1:16,0:14:84.95:85,0,154	0/1:13,0:12:18.81:293,0,19	1/1:5,11:16:8.72:212,9,0	1/1:21,45:56:9.90:166,10,0	0/1:12,0:12:91.66:92,0,358	0/0:2,0:2:3.01:0,3,44	0/0:41,0:40:17.51:0,18,368	1/1:1,16:17:12.51:282,13,0	0/1:9,12:19:21.14:519,0,21	1/1:2,12:14:15.05:542,15,0	1/1:2,0:2:6:99,6,0
chr10	63224870	.	TGTGTGA	T	4547.52	PASS	AB=1.000;AC=42;AF=0.750;AN=56;BaseQRankSum=5.837;DP=584;FS=0.000;HRun=0;HaplotypeScore=118.7597;InbreedingCoeff=0.5155;MQ=64.01;MQ0=12;MQRankSum=-6.047;QD=10.31;ReadPosRankSum=2.622;VQSLOD=3.3001;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:53.79:0,54,749	1/1:2,7:9:15.05:297,15,0	0/0:32,0:18:54.13:0,54,647	0/0:37,0:24:65.12:0,65,742	0/0:20,0:20:47.57:0,48,719	1/1:20,0:19:11.89:152,12,0	1/1:29,0:29:2.96:264,3,0	1/1:27,0:26:7.64:389,8,0	0/0:22,0:22:50.95:0,51,891	0/1:23,0:22:12.64:475,0,13	1/1:4,0:4:8.85:79,9,0	1/1:33,0:33:7.44:76,7,0	1/1:3,10:13:11.47:224,11,0	1/1:21,0:19:14.92:179,15,0	1/1:24,0:23:8.96:201,9,0	0/1:26,0:25:11.50:66,0,12	1/1:18,5:22:47.80:617,48,0	1/1:15,1:14:31.51:392,32,0	0/1:7,0:6:0.66:106,0,1	1/1:13,0:13:8.96:108,9,0	0/1:58,0:51:9.68:10,0,19	1/1:9,0:9:17.84:137,18,0	1/1:2,1:3:2.99:24,3,0	1/1:5,30:35:2.86:73,3,0	1/1:16,0:16:11.90:117,12,0	1/1:16,0:14:23.22:282,23,0	1/1:12,0:12:15.03:231,15,0	1/1:2,0:2:5.99:48,6,0
chr10	63226077	.	CAAAT	C	1160.16	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.677;DP=647;FS=2.790;HRun=0;HaplotypeScore=100.5353;InbreedingCoeff=0.9984;MQ=64.59;MQ0=0;MQRankSum=-0.607;QD=44.62;ReadPosRankSum=2.481;VQSLOD=4.4248;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:57.15:0,57,1416	0/0:10,0:10:27.09:0,27,646	0/0:18,0:15:42.14:0,42,989	0/0:20,0:19:48.10:0,48,1020	0/0:35,0:35:99:0,105,2635	0/0:19,0:19:57.20:0,57,1437	0/0:11,0:11:33.10:0,33,743	0/0:31,0:31:75.23:0,75,1681	0/0:12,0:12:33.11:0,33,790	0/0:36,0:36:99:0,105,2632	0/0:28,0:28:75.24:0,75,1819	0/0:24,0:24:60.20:0,60,1464	0/0:26,0:26:72.25:0,72,1809	0/0:18,0:18:54.17:0,54,1275	0/0:23,0:23:60.16:0,60,1285	1/1:1,25:26:69.24:1255,69,0	0/0:19,0:19:48.16:0,48,1120	0/0:15,0:16:39.10:0,39,936	0/0:23,0:23:66.22:0,66,1548	0/0:38,0:38:99:0,111,2748	0/0:19,0:19:57.20:0,57,1366	0/0:26,0:26:78.25:0,78,1894	0/0:26,0:26:69.24:0,69,1800	0/0:21,0:21:63.22:0,63,1549	0/0:28,0:28:84.29:0,84,2015	0/0:29,0:29:84.29:0,84,2155	0/0:20,0:20:60.21:0,60,1471	0/0:26,0:26:63.19:0,63,1431
chr10	63226312	.	ATG	A	216.31	PASS	AB=0.799;AC=2;AF=0.038;AN=52;BaseQRankSum=-2.685;DP=1001;FS=0.000;HRun=0;HaplotypeScore=217.5553;InbreedingCoeff=-0.0457;MQ=52.75;MQ0=21;MQRankSum=-0.207;QD=3.55;ReadPosRankSum=-3.353;VQSLOD=1.8024;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:33.40:0,33,196	0/0:22,0:22:33.10:0,33,580	0/0:24,0:4:11.98:0,12,158	0/0:22,1:3:5.84:0,6,109	0/0:43,0:39:37.68:0,38,151	0/0:30,0:29:66.21:0,66,1192	0/0:16,0:13:27.06:0,27,431	0/0:54,0:50:99:0,129,1780	0/0:32,0:31:57.19:0,57,991	0/0:67,0:66:99:0,190,3165	0/0:38,0:38:81.22:0,81,1415	0/0:39,0:39:78.25:0,78,1412	0/1:21,11:32:76.32:76,0,718	0/0:42,0:41:99:0,99,1822	0/0:42,0:42:87.28:0,87,1612	0/0:31,0:29:66.23:0,66,1259	0/0:28,0:27:48.13:0,48,838	0/0:29,0:28:67.25:0,67,1056	0/0:13,0:13:33.06:0,33,533	0/0:49,0:48:81.24:0,81,1440	0/0:43,0:42:60.18:0,60,1037	./.	./.	0/1:24,5:29:99:228,0,307	0/0:45,0:44:69.22:0,69,1214	0/0:74,0:73:99:0,188,3122	0/0:35,0:35:72.10:0,72,1152	0/0:23,0:22:33.03:0,33,592
chr10	63226320	.	ATGTG	A	1245.80	PASS	AC=4;AF=0.077;AN=52;BaseQRankSum=-7.936;DP=992;FS=9.458;HRun=0;HaplotypeScore=238.1482;InbreedingCoeff=0.9111;MQ=52.20;MQ0=24;MQRankSum=2.521;QD=15.77;ReadPosRankSum=0.453;VQSLOD=1.8160;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,35:38:30.10:568,30,0	0/0:21,0:21:21.02:0,21,193	0/0:23,0:3:9.03:0,9,185	0/0:25,0:3:6.02:0,6,135	1/1:2,39:38:43.03:798,43,0	0/0:27,0:27:57.08:0,57,551	0/0:14,0:12:18:0,18,169	0/0:58,0:54:84.23:0,84,1005	0/0:38,0:36:60.02:0,60,553	0/0:69,0:68:99:0,148,1584	0/0:33,0:33:63.06:0,63,597	0/0:39,0:39:72.05:0,72,667	0/0:32,0:32:52.44:0,52,622	0/0:37,0:36:87.07:0,87,796	0/0:44,0:43:87.06:0,87,800	0/0:34,0:30:66.02:0,66,589	0/0:28,0:27:45.05:0,45,425	0/0:30,0:28:61.34:0,61,747	0/0:11,0:11:29.98:0,30,263	0/0:48,0:46:72.06:0,72,668	0/0:45,0:44:54.05:0,54,514	./.	./.	0/0:27,0:27:20.56:0,21,250	0/0:41,0:40:50.89:0,51,467	0/0:74,0:73:99:0,177,1558	0/0:35,0:35:63.07:0,63,603	0/0:20,0:20:20.48:0,20,198
chr10	63226322	.	G	GTA	23711.48	PASS	AC=38;AF=0.731;AN=52;BaseQRankSum=-12.037;DP=998;FS=10.978;HRun=0;HaplotypeScore=139.3474;InbreedingCoeff=0.9444;MQ=52.51;MQ0=24;MQRankSum=0.542;QD=32.84;ReadPosRankSum=0.057;VQSLOD=6.3798;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:31.30:0,31,135	1/1:2,17:20:21.07:403,21,0	0/0:23,0:4:8.99:0,9,112	0/0:25,0:3:5.85:0,6,87	0/0:40,0:38:37.32:0,37,171	1/1:3,26:28:56.89:1013,57,0	1/1:8,6:12:20.55:273,21,0	1/1:34,23:54:74.88:1574,75,0	1/1:18,19:35:62.81:1044,63,0	1/1:7,63:69:99:3191,190,0	1/1:3,30:34:62.88:1128,63,0	1/1:8,31:40:71.83:1296,72,0	0/0:33,0:33:23.71:0,24,427	1/1:4,35:39:87.16:1677,87,0	1/1:5,40:44:86.79:1547,87,0	1/1:4,29:29:66.06:1230,66,0	1/1:6,22:27:44.86:823,45,0	0/0:31,0:29:5.81:0,6,534	1/1:1,10:11:30.06:541,30,0	1/1:5,42:45:71.91:1302,72,0	1/1:2,43:45:54.01:975,54,0	./.	./.	0/0:26,0:26:25.85:0,26,251	1/1:1,37:37:50.99:941,51,0	1/1:11,67:78:99:3203,202,0	1/1:5,30:35:62.77:1126,63,0	1/1:0,19:19:24.01:423,24,0
chr10	63226326	.	GTA	G	7496.62	PASS	AC=44;AF=0.846;AN=52;BaseQRankSum=0.104;DP=991;FS=11.359;HRun=0;HaplotypeScore=199.3315;InbreedingCoeff=0.9215;MQ=52.31;MQ0=22;MQRankSum=2.424;QD=9.31;ReadPosRankSum=1.448;VQSLOD=3.8594;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,1:38:28.10:0,28,98	1/1:16,1:17:18.90:100,19,0	0/0:21,0:4:9.01:0,9,118	0/0:22,0:3:3.01:0,3,51	0/0:43,0:41:40.64:0,41,191	1/1:25,2:26:41.13:188,41,0	1/1:12,2:12:15.64:125,16,0	1/1:42,13:52:53.47:625,53,0	1/1:34,3:35:36.37:226,36,0	1/1:65,5:69:99:841,135,0	1/1:31,3:34:49.91:236,50,0	1/1:37,6:43:60.64:291,61,0	1/1:11,24:35:51.16:661,51,0	1/1:39,2:40:65.58:229,66,0	1/1:39,4:42:65.08:301,65,0	1/1:31,4:31:58.77:269,59,0	1/1:24,1:24:33.75:163,34,0	1/1:16,16:32:25.57:655,26,0	1/1:12,1:12:29.22:156,29,0	1/1:39,4:41:56.22:258,56,0	1/1:45,2:46:48.06:270,48,0	./.	./.	1/1:4,18:23:21.01:252,21,0	1/1:36,1:36:42.43:190,42,0	1/1:71,7:77:99:1042,123,0	1/1:33,4:37:56.05:335,56,0	1/1:17,0:17:19.04:85,19,0
chr10	63226410	.	GTGTA	G	947.69	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.067;DP=1150;FS=1.763;HRun=0;HaplotypeScore=194.0621;InbreedingCoeff=0.8228;MQ=53.12;MQ0=32;MQRankSum=1.937;QD=16.92;ReadPosRankSum=2.413;VQSLOD=2.9999;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:38:33.11:0,33,732	0/0:15,0:15:42.14:0,42,1001	0/0:32,0:5:12.04:0,12,242	0/0:39,0:5:3.01:0,3,62	0/0:42,0:41:99:0,105,2350	0/0:23,0:23:48.16:0,48,1139	0/0:31,0:28:45.04:0,45,916	0/0:87,0:65:99:0,126,2391	1/1:9,47:53:60.21:1042,60,0	0/0:73,0:72:99:0,183,4200	0/0:33,0:33:84.27:0,84,1981	0/0:46,0:46:99:0,99,2320	0/0:39,0:39:93.29:0,93,2141	0/0:48,0:48:99:0,126,2928	0/0:57,0:57:99:0,144,3542	0/0:44,0:42:99:0,111,2577	0/0:21,1:22:41.69:0,42,910	0/0:39,0:38:66.49:0,66,1604	0/0:19,0:14:18.04:0,18,915	0/0:46,0:45:99:0,123,2923	0/0:49,0:46:99:0,111,2525	0/0:36,0:36:81.28:0,81,1969	0/0:41,0:40:93.31:0,93,2157	0/0:30,0:29:39.13:0,39,936	0/0:22,0:22:60.19:0,60,1427	0/0:70,0:68:99:0,166,3941	0/0:42,0:42:93.30:0,93,2188	0/0:29,0:29:81.23:0,81,1953
chr10	63226512	.	ATATG	A	3796.06	PASS	AB=0.963;AC=11;AF=0.196;AN=56;BaseQRankSum=-1.798;DP=1081;FS=7.098;HRun=0;HaplotypeScore=195.3043;InbreedingCoeff=0.8717;MQ=53.07;MQ0=25;MQRankSum=-1.582;QD=20.63;ReadPosRankSum=-3.093;VQSLOD=1.8240;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:54.13:0,54,1117	1/1:6,9:15:42.11:656,42,0	0/0:24,0:3:3.01:0,3,74	0/0:32,0:5:9:0,9,123	0/0:40,0:40:96.29:0,96,2248	0/0:19,0:19:42.12:0,42,935	0/1:25,1:25:3.42:3,0,1065	1/1:42,9:40:42.77:909,43,0	1/1:18,29:44:66.23:1119,66,0	0/0:64,0:63:99:0,168,3795	0/0:31,0:31:72.23:0,72,1712	0/0:43,0:43:78.22:0,78,1864	0/0:52,0:52:99:0,114,2611	0/0:44,0:44:99:0,99,2332	0/0:65,0:65:99:0,160,3704	0/0:44,0:44:99:0,117,2714	1/1:13,7:18:20.20:306,20,0	1/1:11,14:25:36.02:803,36,0	0/0:19,0:12:30.09:0,30,702	0/0:44,0:44:99:0,102,2461	0/0:51,0:50:99:0,102,2467	0/0:49,0:49:99:0,123,2945	0/0:51,0:51:99:0,123,2854	0/0:27,0:26:48.14:0,48,1136	0/0:28,0:28:66.23:0,66,1624	0/0:68,0:67:99:0,169,3883	0/0:42,0:42:93.25:0,93,2064	0/0:26,0:26:66.23:0,66,1658
chr10	63226606	.	ATGTATGTGTG	A	89.84	PASS	AB=1.000;AC=4;AF=0.074;AN=54;BaseQRankSum=4.351;DP=1024;FS=0.742;HRun=0;HaplotypeScore=287.1485;InbreedingCoeff=0.4627;MQ=46.95;MQ0=34;MQRankSum=-6.649;QD=0.59;ReadPosRankSum=-7.327;VQSLOD=0.2192;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:29:14.09:0,14,111	0/0:25,0:25:30.10:0,30,778	./.	0/0:11,0:4:9.03:0,9,254	0/0:35,0:28:31.43:0,31,187	0/0:27,0:25:24.08:0,24,493	0/0:25,0:21:0.89:0,1,2	0/0:86,0:54:93.37:0,93,1382	1/1:19,42:58:8.93:171,9,0	0/1:72,0:67:10.60:11,0,1783	0/0:30,0:29:39.13:0,39,751	0/0:49,0:47:49.63:0,50,1029	0/0:41,0:39:60.16:0,60,1099	0/0:40,0:40:57.12:0,57,1000	0/0:53,0:50:72.22:0,72,1267	0/0:46,0:42:80.87:0,81,1575	0/0:21,0:19:25.37:0,25,490	0/0:30,0:30:40.47:0,40,858	0/1:20,0:14:2.03:2,0,373	0/0:44,0:42:60.19:0,60,1094	0/0:39,0:35:52.55:0,53,660	0/0:34,0:33:36.12:0,36,667	0/0:37,0:31:42.13:0,42,762	0/0:24,0:24:32.69:0,33,436	0/0:26,0:26:44.72:0,45,800	0/0:54,0:53:55.50:0,56,1433	0/0:40,0:38:21.27:0,21,788	0/0:11,0:11:12.05:0,12,170
chr10	63226608	.	GTA	G	1107.36	PASS	AB=0.976;AC=13;AF=0.241;AN=54;BaseQRankSum=-4.534;DP=1019;FS=2.834;HRun=0;HaplotypeScore=191.4651;InbreedingCoeff=-0.0744;MQ=46.66;MQ0=36;MQRankSum=-3.774;QD=2.44;ReadPosRankSum=-7.455;VQSLOD=0.3117;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,3:30:2.11:0,2,110	0/1:25,0:25:37.42:113,0,37	./.	0/0:10,0:4:9.03:0,9,164	0/0:31,4:28:7.39:0,7,213	0/0:26,1:25:33.05:0,33,388	0/1:25,0:21:0.03:0,0,0	0/1:82,0:52:99:493,0,228	0/0:60,0:57:17.84:0,18,158	0/1:69,1:65:99:131,0,1218	0/0:29,1:29:42.12:0,42,533	0/0:52,0:50:34.26:0,34,750	0/0:39,0:37:66.14:0,66,806	0/0:39,1:40:29.67:0,30,712	0/0:48,2:47:32.35:0,32,857	0/0:44,2:42:57.56:0,58,1086	1/1:20,0:19:26.54:166,27,0	0/1:29,1:30:99:116,0,198	0/1:21,0:14:99:123,0,210	0/0:44,2:43:34.24:0,34,784	0/1:39,0:35:8.55:9,0,407	0/0:34,0:33:38.59:0,39,467	0/0:37,0:31:14.12:0,14,527	0/1:23,1:24:44.14:44,0,247	0/1:22,5:27:14.20:14,0,473	0/1:54,0:53:28.86:29,0,1032	0/1:36,1:35:19.40:19,0,622	0/0:8,3:11:11.89:0,12,138
chr10	63226610	.	ATG	A	3416.20	PASS	AB=0.923;AC=17;AF=0.315;AN=54;BaseQRankSum=-8.378;DP=1013;FS=2.150;HRun=0;HaplotypeScore=186.5442;InbreedingCoeff=0.1167;MQ=46.59;MQ0=35;MQRankSum=-3.648;QD=6.25;ReadPosRankSum=-11.067;VQSLOD=0.3056;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:36,1:31:32.26:40,0,32	1/1:8,17:25:29.86:399,30,0	./.	0/0:13,0:4:9.03:0,9,155	1/1:36,0:29:19.26:87,19,0	0/0:26,0:24:23.52:0,24,145	0/1:25,0:21:0:0,0,0	0/1:47,35:53:25.55:1257,0,26	0/1:54,4:55:0.79:1,0,16	0/1:66,1:62:99:304,0,456	0/0:31,0:30:31.83:0,32,218	0/0:51,0:49:51.57:0,52,328	0/0:38,0:36:55.06:0,55,328	0/0:40,0:40:42.81:0,43,294	0/0:47,0:44:28.11:0,28,298	0/0:46,0:42:72.49:0,72,473	1/1:5,14:18:27.20:358,27,0	0/1:17,13:30:55.03:397,0,55	0/1:20,0:14:89.71:110,0,90	0/0:45,1:43:37.72:0,38,301	0/1:38,3:37:99:137,0,143	0/0:33,0:32:20.08:0,20,176	0/0:37,1:32:23.82:0,24,219	0/1:25,1:26:99:102,0,105	0/1:27,1:28:37.68:38,0,208	0/1:52,0:51:99:186,0,319	0/0:37,0:35:7.17:0,7,237	0/0:11,0:11:9.79:0,10,65
chr10	63226612	.	G	GTA	2678.43	PASS	AB=0.998;AC=37;AF=0.685;AN=54;BaseQRankSum=1.946;DP=1022;FS=1.235;HRun=0;HaplotypeScore=194.9878;InbreedingCoeff=0.1819;MQ=46.44;MQ0=36;MQRankSum=2.913;QD=2.89;ReadPosRankSum=9.602;VQSLOD=1.0978;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:36,0:30:3.20:3,0,68	0/0:25,0:25:26.78:0,27,110	./.	0/0:14,0:4:9.03:0,9,137	0/1:35,0:28:13.73:74,0,14	1/1:23,0:21:20.02:73,20,0	1/1:27,0:23:1.82:5,2,0	0/1:85,0:56:99:249,0,326	1/1:49,8:54:8.94:173,9,0	0/1:67,0:62:99:287,0,161	1/1:32,0:31:34.78:129,35,0	0/1:54,0:52:12.96:152,0,13	1/1:38,0:36:29.02:156,29,0	1/1:39,0:39:4.41:110,4,0	1/1:49,0:46:12.16:144,12,0	1/1:45,0:41:66.99:227,67,0	0/0:19,0:18:23.46:0,23,93	0/0:25,1:26:18.52:0,19,182	0/1:22,0:16:14.52:77,0,15	1/1:47,0:44:28.68:160,29,0	0/1:41,0:37:60.74:61,0,66	1/1:36,0:35:29.44:104,29,0	1/1:38,0:32:40.23:150,40,0	0/1:27,0:27:36.64:52,0,37	1/1:29,0:29:0.72:67,1,0	0/1:53,0:52:99:150,0,157	1/1:35,0:33:16.24:155,16,0	1/1:11,0:11:12.19:94,12,0
chr10	63226616	.	G	GTA	21008.03	PASS	AB=0.987;AC=45;AF=0.833;AN=54;BaseQRankSum=-8.738;DP=1037;FS=9.242;HRun=0;HaplotypeScore=147.7307;InbreedingCoeff=0.4681;MQ=46.87;MQ0=36;MQRankSum=7.038;QD=21.93;ReadPosRankSum=1.921;VQSLOD=5.4171;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:24,14:33:9.38:293,9,0	0/0:19,5:24:11.61:0,12,94	./.	0/0:15,0:4:9.03:0,9,137	1/1:6,29:28:33.10:636,33,0	1/1:4,20:22:24.07:463,24,0	0/0:8,20:25:0.02:0,0,15	0/1:78,0:53:99:238,0,295	1/1:57,3:56:8.52:72,9,0	1/1:12,60:67:99:2850,163,0	1/1:4,30:32:42.14:810,42,0	1/1:4,48:52:63.01:1204,63,0	1/1:3,36:37:57.20:1097,57,0	1/1:5,35:40:54.18:1041,54,0	1/1:4,48:49:61.03:1321,61,0	1/1:5,44:45:84.29:1621,84,0	0/1:19,0:18:33.21:33,0,60	0/1:24,1:25:10.29:10,0,161	1/1:4,17:17:51.08:834,51,0	1/1:7,40:45:60.18:1157,60,0	1/1:25,15:35:48.14:833,48,0	1/1:1,35:35:36.12:695,36,0	1/1:5,33:32:48.16:924,48,0	1/1:15,15:30:46.33:711,46,0	1/1:11,20:31:54.11:941,54,0	1/1:7,39:45:99:1967,111,0	1/1:5,32:35:57.14:1027,57,0	1/1:8,3:11:11.69:231,12,0
chr10	63227084	.	CGT	C	720.14	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.030;DP=974;FS=2.604;HRun=0;HaplotypeScore=147.5729;InbreedingCoeff=0.9997;MQ=59.91;MQ0=5;MQRankSum=1.013;QD=19.46;ReadPosRankSum=-0.093;VQSLOD=4.0064;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:71.96:0,72,1215	0/0:13,0:13:36.12:0,36,607	0/0:49,1:40:66.22:0,66,1326	0/0:55,0:47:99:0,109,1661	0/0:20,0:20:41.23:0,41,652	0/0:22,0:22:51.17:0,51,862	0/0:39,0:39:93.26:0,93,1507	0/0:45,0:45:99:0,105,1642	1/1:5,32:37:63.20:815,63,0	0/0:33,0:33:70.68:0,71,1462	0/0:19,0:19:42.10:0,42,631	0/0:33,0:33:66.23:0,66,1112	0/0:24,0:24:69.12:0,69,1054	0/0:31,0:31:72.23:0,72,1171	0/0:40,0:40:96.31:0,96,1605	0/0:27,0:27:69.18:0,69,1137	0/0:30,1:31:51.13:0,51,1372	0/0:25,0:25:53.74:0,54,1129	0/0:22,0:22:54.08:0,54,784	0/0:30,0:29:66.21:0,66,1093	0/0:115,0:112:99:0,243,3929	0/0:37,0:37:99:0,99,1534	0/0:28,0:28:69.22:0,69,1139	0/0:49,0:49:99:0,99,1595	0/0:33,0:33:78.24:0,78,1281	0/0:38,0:38:99:0,105,1709	0/0:25,0:24:66.22:0,66,1099	0/0:16,0:16:36.12:0,36,602
chr10	63227159	.	GAGAGAGTA	G	1168.39	PASS	AB=0.999;AC=15;AF=0.268;AN=56;BaseQRankSum=11.150;DP=820;FS=17.650;HRun=0;HaplotypeScore=282.3043;InbreedingCoeff=-0.1842;MQ=51.24;MQ0=9;MQRankSum=-6.710;QD=2.80;ReadPosRankSum=-5.990;VQSLOD=0.3783;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:46,0:46:36.85:338,0,37	0/0:7,0:7:11.97:0,12,437	0/0:48,0:32:87.72:0,88,2581	0/0:54,0:35:80.92:0,81,2673	1/1:25,0:25:13.32:104,13,0	0/1:19,0:19:99:101,0,921	0/1:31,0:30:42.87:43,0,1627	0/0:29,0:28:79.13:0,79,2614	0/0:25,0:22:20.93:0,21,1008	0/1:31,0:31:99:286,0,1878	0/0:19,6:25:43.65:0,44,1214	0/0:23,0:23:47.55:0,48,1571	0/1:25,0:25:60.16:60,0,1291	0/0:26,0:26:50.61:0,51,1373	0/0:21,0:21:27.93:0,28,736	0/0:22,0:22:33.72:0,34,749	0/0:36,0:36:14.87:0,15,2434	0/0:34,0:34:79.49:0,79,2844	0/1:16,0:16:67.08:67,0,1303	0/1:17,0:17:9.27:9,0,987	0/1:81,0:79:28.65:29,0,4041	0/0:21,0:21:37.89:0,38,1189	0/1:25,0:25:16.64:17,0,1128	0/1:49,0:49:99:234,0,1215	0/1:23,0:21:14.84:15,0,844	0/0:29,0:28:84.28:0,84,2893	0/1:22,0:22:11.69:12,0,1671	0/1:7,0:7:16.54:17,0,422
chr10	63227162	.	AGAGTATGTGT	A	1998.74	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.451;DP=795;FS=17.384;HRun=0;HaplotypeScore=293.8754;InbreedingCoeff=0.9587;MQ=51.07;MQ0=8;MQRankSum=-3.549;QD=27.76;ReadPosRankSum=-2.736;VQSLOD=1.1728;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:29,14:46:61.83:1810,62,0	0/0:7,0:7:12.24:0,12,375	0/0:46,0:29:68.98:0,69,1525	0/0:53,0:33:75.05:0,75,1605	1/1:1,22:26:13.74:307,14,0	0/0:20,0:20:19.10:0,19,765	0/0:31,0:30:41.20:0,41,872	0/0:27,0:25:75.25:0,75,2022	0/0:23,0:21:38.60:0,39,821	0/0:32,0:32:57.10:0,57,1475	0/0:24,0:23:33.58:0,34,817	0/0:23,0:23:48.10:0,48,1154	0/0:23,0:23:43.09:0,43,785	0/0:22,0:22:41.89:0,42,786	0/0:21,0:21:29.37:0,29,513	0/0:20,0:20:27.36:0,27,419	0/0:35,0:35:79.82:0,80,2725	0/0:34,0:34:63.36:0,63,2925	0/0:16,0:16:17.66:0,18,1177	0/0:17,0:17:30.76:0,31,752	0/0:77,0:74:99:0,125,2893	0/0:21,0:21:39.29:0,39,666	0/0:25,0:25:36.08:0,36,943	0/0:47,0:47:23:0,23,670	0/0:23,0:21:26.47:0,26,488	0/0:28,0:27:79.60:0,80,2191	0/0:20,0:20:28.81:0,29,1119	0/0:7,0:7:17.71:0,18,351
chr10	63227164	.	A	AGTGTGTGTGTGTGTGT	5008.87	PASS	AB=0.997;AC=20;AF=0.357;AN=56;BaseQRankSum=8.508;DP=804;FS=28.904;HRun=0;HaplotypeScore=367.1362;InbreedingCoeff=-0.2651;MQ=50.52;MQ0=8;MQRankSum=-5.759;QD=9.65;ReadPosRankSum=-2.261;VQSLOD=1.9816;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:47,0:47:98.32:98,0,105	0/0:7,0:7:11.56:0,12,202	0/0:44,0:27:58.41:0,58,756	0/0:54,0:32:68.56:0,69,874	1/1:26,0:26:7.87:86,8,0	0/1:21,0:21:99:252,0,208	0/1:29,0:29:99:159,0,529	0/0:27,0:25:29.23:0,29,716	1/1:20,0:24:15.17:275,15,0	0/1:34,0:34:99:1218,0,527	0/0:23,0:22:8.24:0,8,240	0/0:22,0:22:42.69:0,43,470	0/1:21,0:21:99:399,0,316	0/0:19,1:33:38.46:0,38,490	0/0:20,0:21:20.99:0,21,210	0/1:20,0:20:99:121,0,142	0/1:35,0:35:7.45:7,0,1081	0/0:34,0:34:84.13:0,84,1434	0/1:17,0:17:99:894,0,209	0/1:17,0:17:99:118,0,306	0/1:76,0:74:99:214,0,1033	0/0:20,0:20:29.64:0,30,355	0/1:23,0:23:99:170,0,233	0/1:47,0:47:99:366,0,213	0/1:23,0:21:99:125,0,245	0/1:28,0:27:99:296,0,541	0/1:19,0:19:99:126,0,437	0/1:7,0:7:83.55:84,0,106
chr10	63227167	.	A	ATGTGTGTGTGTGTGTG	8928.29	PASS	AB=0.830;AC=42;AF=0.750;AN=56;BaseQRankSum=-5.008;DP=891;FS=19.911;HRun=0;HaplotypeScore=369.8595;InbreedingCoeff=0.3996;MQ=50.48;MQ0=8;MQRankSum=-2.887;QD=12.42;ReadPosRankSum=-2.985;VQSLOD=1.6972;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:47,0:47:57.02:235,0,57	0/0:4,0:7:2.39:0,2,14	0/0:41,0:26:4.41:0,4,75	0/0:50,0:29:3.04:0,3,135	1/1:27,0:27:7.45:131,7,0	1/1:22,0:22:21.51:432,22,0	1/1:24,0:40:6.23:159,6,0	1/1:20,0:27:18.51:321,19,0	1/1:25,0:22:12.06:328,12,0	1/1:37,0:37:58.33:1650,58,0	1/1:24,0:23:11.32:161,11,0	0/0:17,9:34:0.77:0,1,2	1/1:22,0:22:16.88:551,17,0	0/1:35,0:35:0.02:1,0,0	1/1:21,2:31:1.40:2,1,0	1/1:12,1:27:3.01:169,3,0	0/1:14,0:39:99:99,0,424	0/0:14,0:38:41.80:0,42,545	1/1:13,6:22:39.61:1697,40,0	1/1:12,6:24:3.01:179,3,0	1/1:77,0:74:28.59:637,29,0	0/1:16,5:26:0:0,0,0	1/1:23,0:23:12.96:344,13,0	1/1:43,0:43:20.27:575,20,0	1/1:17,10:32:1.37:189,1,0	1/1:23,4:30:23.57:781,24,0	1/1:18,3:23:1.51:191,2,0	1/1:7,0:7:3.01:95,3,0
chr10	63228363	.	GA	G	4986.29	PASS	AB=0.787;AC=23;AF=0.411;AN=56;BaseQRankSum=5.656;DP=1460;FS=27.894;HRun=11;HaplotypeScore=175.0605;InbreedingCoeff=-0.1514;MQ=58.93;MQ0=0;MQRankSum=3.836;QD=4.13;ReadPosRankSum=3.074;VQSLOD=0.8409;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,2:48:93.85:0,94,1160	1/1:3,15:18:8.51:268,9,0	0/0:19,0:16:13.45:0,13,143	0/0:12,0:11:0.81:0,1,57	0/0:32,1:38:65.33:0,65,841	0/1:53,18:71:99:251,0,1013	0/1:41,20:62:99:333,0,647	1/1:6,14:20:12.86:302,13,0	0/0:23,1:24:41.52:0,42,647	0/1:71,19:91:99:258,0,1123	0/1:59,18:78:99:172,0,966	0/1:64,17:83:56.59:57,0,1234	0/0:9,0:28:58.78:0,59,353	0/1:44,17:63:99:237,0,729	0/1:46,19:65:99:161,0,867	0/1:60,24:86:99:265,0,1336	1/1:1,22:23:62.93:517,63,0	1/1:2,15:17:41.94:345,42,0	0/1:44,16:62:80.81:81,0,864	0/1:70,31:101:99:355,0,1238	0/1:45,22:67:99:355,0,853	0/0:7,0:30:66.65:0,67,384	0/0:7,1:31:30.80:0,31,263	0/0:4,0:22:39.91:0,40,201	0/1:49,28:79:99:350,0,1084	0/1:64,19:84:99:272,0,1011	0/1:60,16:79:99:218,0,1368	0/1:41,17:59:99:192,0,986
chr10	63228932	.	GGTGTGTGTGTGTGTGTGGT	G	15686.33	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=1.288;DP=631;FS=12.943;HRun=0;HaplotypeScore=264.6469;InbreedingCoeff=0.8336;MQ=60.83;MQ0=30;MQRankSum=-2.645;QD=44.95;ReadPosRankSum=4.267;VQSLOD=2.5025;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:38:11.27:0,11,800	1/1:4,0:4:2.97:20,3,0	0/0:43,0:25:36.12:0,36,1286	0/0:41,0:23:29.85:0,30,1059	0/0:18,0:17:0.89:0,1,2	1/1:5,14:18:24.04:1008,24,0	1/1:14,12:27:17.77:594,18,0	0/0:31,0:29:51.30:0,51,2264	0/0:9,0:7:6.02:0,6,446	1/1:11,24:36:69.09:2333,69,0	1/1:6,14:23:29.56:521,30,0	1/1:11,21:31:39.08:1880,39,0	0/0:12,0:11:12.04:0,12,930	1/1:8,14:21:20.22:1037,20,0	1/1:6,16:22:21.02:950,21,0	1/1:5,12:17:18.02:697,18,0	0/0:22,0:20:15.05:0,15,1136	0/0:21,0:14:12.04:0,12,921	1/1:13,9:21:36.11:1146,36,0	1/1:6,12:20:29.98:807,30,0	1/1:13,13:26:5.39:94,5,0	0/0:11,0:9:3.48:0,3,204	0/0:13,0:12:6:0,6,187	0/0:19,0:18:5.20:0,5,238	1/1:7,13:20:30.02:1082,30,0	1/1:10,19:29:57.02:1693,57,0	1/1:5,16:22:14.56:1358,15,0	1/1:1,6:7:9.03:465,9,0
chr10	63228949	.	G	GT	1771.54	PASS	AB=1.000;AC=30;AF=0.536;AN=56;BaseQRankSum=-7.932;DP=581;FS=2.486;HRun=1;HaplotypeScore=151.9727;InbreedingCoeff=0.2942;MQ=47.54;MQ0=60;MQRankSum=1.710;QD=4.74;ReadPosRankSum=-1.372;VQSLOD=-0.1812;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,36:36:14.42:192,14,0	1/1:0,3:4:2.97:20,3,0	0/0:50,0:12:36.12:0,36,469	0/0:47,0:16:29.78:0,30,352	1/1:1,13:12:0.14:1,0,0	0/0:15,0:14:19.30:0,19,93	0/1:13,0:13:6.64:7,0,22	1/1:4,25:25:33.25:897,33,0	1/1:1,2:12:6.01:61,6,0	0/1:25,0:25:95.17:95,0,120	0/1:17,0:17:14.50:14,0,77	0/0:23,0:22:32.02:0,32,121	1/1:0,1:15:12.02:115,12,0	0/1:16,0:15:0.68:1,0,54	0/0:17,0:16:16.33:0,16,73	0/1:12,0:12:4.73:5,0,46	1/1:3,2:17:18.04:212,18,0	1/1:7,3:20:6.73:109,7,0	0/1:17,0:12:59.23:65,0,59	0/0:16,0:15:2.20:0,2,56	0/1:17,0:15:11.01:13,0,11	1/1:2,3:20:7.08:46,7,0	1/1:1,2:18:5.05:47,5,0	1/1:1,1:23:2.77:29,3,0	0/0:13,0:13:1.12:0,1,85	0/1:20,0:20:18.64:19,0,133	0/0:20,0:19:23.18:0,23,100	0/0:6,0:6:6.66:0,7,20
chr10	63229948	.	CCTCTCT	C	1446.77	PASS	AB=0.979;AC=22;AF=0.423;AN=52;BaseQRankSum=1.056;DP=598;FS=24.175;HRun=0;HaplotypeScore=129.4272;InbreedingCoeff=0.6249;MQ=69.27;MQ0=11;MQRankSum=-3.891;QD=6.18;ReadPosRankSum=2.825;VQSLOD=1.0062;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:34:30.08:0,30,793	0/0:11,0:15:7.58:0,8,160	./.	./.	0/0:28,0:33:12.51:0,13,251	0/0:24,0:25:11.83:0,12,104	0/0:27,0:30:15.50:0,16,178	0/0:28,0:28:25.09:0,25,396	1/1:6,0:11:12.04:168,12,0	1/1:20,4:23:6.01:121,6,0	1/1:14,5:17:2.67:60,3,0	1/1:11,7:18:6.49:122,6,0	0/0:10,0:14:12.82:0,13,325	1/1:17,9:25:17.78:280,18,0	1/1:7,4:11:9.03:182,9,0	1/1:11,5:18:11.49:163,11,0	0/0:26,0:25:24.51:0,25,551	0/0:18,0:20:33.08:0,33,755	0/1:20,0:20:8.50:8,0,75	0/0:14,0:18:3:0,3,25	0/1:22,0:23:12.91:81,0,13	0/0:20,0:20:9.50:0,10,240	0/0:12,0:16:3.01:0,3,77	0/0:13,0:24:18.06:0,18,465	1/1:11,7:18:9.50:183,10,0	1/1:15,4:19:8.09:143,8,0	0/0:8,0:11:2.37:0,2,8	1/1:19,7:23:4.76:119,5,0
chr10	63230190	.	C	CA	2193.23	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=12.556;DP=563;FS=2.120;HRun=0;HaplotypeScore=68.9853;InbreedingCoeff=0.9878;MQ=82.90;MQ0=0;MQRankSum=-3.738;QD=28.86;ReadPosRankSum=3.062;VQSLOD=3.9804;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,117,1627	1/1:0,4:4:12.03:128,12,0	0/0:16,0:16:47.94:0,48,618	0/0:17,0:17:45.10:0,45,589	0/0:22,0:22:63.21:0,63,879	0/0:18,0:18:45.15:0,45,627	0/0:30,0:30:87.21:0,87,1156	1/1:0,12:15:44.48:431,44,0	0/0:15,0:15:45.15:0,45,627	0/0:19,0:19:54.16:0,54,735	0/0:7,0:7:18.06:0,18,251	0/0:22,0:22:63.18:0,63,857	0/0:17,0:17:48.15:0,48,646	0/0:27,0:27:75.25:0,75,1046	0/0:13,0:13:39.13:0,39,544	0/0:22,0:22:57.02:0,57,763	1/1:5,35:39:99:1211,108,0	1/1:0,17:17:51.14:581,51,0	0/0:22,0:21:66.18:0,66,896	0/0:10,0:10:30.04:0,30,380	0/0:51,0:51:99:0,147,2011	0/0:14,0:14:42.14:0,42,587	0/0:8,0:8:24.08:0,24,335	0/0:25,0:25:72.23:0,72,986	0/0:20,0:20:57.17:0,57,776	0/0:27,0:27:81.27:0,81,1125	0/0:17,0:16:51.17:0,51,701	0/0:8,0:8:24.08:0,24,330
chr10	63230191	.	G	GGC	3199.94	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=12.946;DP=570;FS=0.000;HRun=0;HaplotypeScore=80.4772;InbreedingCoeff=0.9878;MQ=83.15;MQ0=0;MQRankSum=-2.075;QD=38.55;ReadPosRankSum=2.939;VQSLOD=5.6004;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,120,1909	1/1:0,4:4:12.04:181,12,0	0/0:17,0:17:47.81:0,48,719	0/0:17,0:17:45.14:0,45,699	0/0:23,0:23:66.21:0,66,1051	0/0:18,0:18:54.13:0,54,804	0/0:30,0:30:90.29:0,90,1435	1/1:8,12:20:53.91:698,54,0	0/0:15,0:15:45.15:0,45,732	0/0:19,0:19:54.18:0,54,881	0/0:7,0:7:18.06:0,18,289	0/0:23,0:23:66.21:0,66,1042	0/0:17,0:17:51.10:0,51,747	0/0:26,0:26:78.25:0,78,1248	0/0:13,0:13:39.13:0,39,636	0/0:21,0:21:63.13:0,63,927	1/1:7,35:41:99:1677,109,0	1/1:0,17:17:51.17:802,51,0	0/0:23,0:22:63.21:0,63,1025	0/0:10,0:10:30.10:0,30,482	0/0:50,0:50:99:0,150,2368	0/0:14,0:14:42.14:0,42,685	0/0:8,0:8:24.08:0,24,391	0/0:24,0:24:72.23:0,72,1141	0/0:19,0:19:54.17:0,54,858	0/0:27,0:27:81.28:0,81,1317	0/0:18,0:17:51.16:0,51,807	0/0:8,0:8:24.08:0,24,391
chr10	63230916	.	G	GAT	552.75	PASS	AB=0.967;AC=15;AF=0.341;AN=44;BaseQRankSum=5.744;DP=360;FS=1.290;HRun=0;HaplotypeScore=105.0190;InbreedingCoeff=0.3044;MQ=57.35;MQ0=0;MQRankSum=-2.359;QD=5.42;ReadPosRankSum=1.581;VQSLOD=3.0068;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	1/1:3,0:4:2.84:14,3,0	0/1:9,0:9:36.81:37,0,78	0/1:4,0:4:14.21:14,0,27	1/1:20,0:20:0.47:1,0,0	./.	0/0:10,0:10:3:0,3,25	0/0:15,0:15:44.54:0,45,304	1/1:0,15:15:36.12:578,36,0	0/0:17,0:17:49.99:0,50,326	1/1:10,0:10:0.47:1,0,0	0/0:21,0:21:8.89:0,9,62	./.	0/0:21,0:21:5.99:0,6,49	0/0:15,0:15:3:0,3,25	0/0:20,0:20:5.94:0,6,43	1/1:13,0:14:2.80:13,3,0	0/0:5,0:6:5.92:0,6,39	0/0:12,0:12:35.75:0,36,262	./.	0/0:17,0:17:5.02:0,5,42	1/1:16,0:17:3.22:13,3,0	./.	./.	0/0:11,0:11:5.99:0,6,48	0/0:13,0:13:27.63:0,28,191	0/1:8,0:9:8.38:8,0,51	0/0:1,0:1:2.97:0,3,20
chr10	63230987	.	AG	A	2444.31	PASS	AB=0.958;AC=43;AF=0.935;AN=46;BaseQRankSum=-5.408;DP=205;FS=33.962;HRun=2;HaplotypeScore=63.8961;InbreedingCoeff=0.1487;MQ=95.06;MQ0=8;MQRankSum=-1.306;QD=15.67;ReadPosRankSum=1.426;VQSLOD=1.7889;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,2:2:3.01:39,3,0	1/1:0,3:3:9.03:117,9,0	0/0:44,3:20:33.44:0,33,578	0/1:44,2:24:23.43:23,0,410	1/1:1,10:11:3.01:41,3,0	./.	1/1:0,6:6:15.05:190,15,0	1/1:2,8:9:26.48:289,26,0	1/1:0,1:1:3.01:39,3,0	1/1:1,13:14:33.11:428,33,0	1/1:1,4:5:6.02:78,6,0	./.	./.	1/1:0,1:1:3.01:39,3,0	1/1:0,2:2:3.01:39,3,0	./.	./.	1/1:0,1:1:3.01:39,3,0	1/1:0,3:1:3.01:39,3,0	1/1:1,7:8:15.05:195,15,0	1/1:0,5:5:3.01:39,3,0	1/1:0,11:11:18.06:225,18,0	1/1:0,6:6:6.49:78,6,0	1/1:0,1:1:3.01:33,3,0	1/1:0,8:8:24.08:311,24,0	1/1:0,6:6:12.04:156,12,0	1/1:0,4:4:3.48:40,3,0	1/1:0,2:2:6.02:78,6,0
chr10	63231062	.	AG	A	1458.03	PASS	AB=0.775;AC=28;AF=0.737;AN=38;BaseQRankSum=-2.239;DP=149;FS=22.124;HRun=1;HaplotypeScore=103.9435;InbreedingCoeff=0.4487;MQ=87.06;MQ0=3;MQRankSum=-3.194;QD=13.25;ReadPosRankSum=-0.125;VQSLOD=1.3842;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	1/1:0,5:5:15.05:207,15,0	0/0:9,0:6:3.23:0,3,91	0/0:23,2:14:8.67:0,9,121	0/1:3,6:9:0:1,0,0	./.	1/1:1,1:2:2.69:42,3,0	./.	./.	1/1:2,4:6:9.33:163,9,0	1/1:0,8:8:5.91:57,6,0	./.	0/1:3,0:3:0.37:0,0,0	./.	0/0:2,0:2:0.25:0,0,1	./.	0/1:2,0:2:0:0,0,0	./.	1/1:1,0:1:3.01:30,3,0	1/1:2,27:28:33.58:461,34,0	./.	1/1:3,8:11:5.63:83,6,0	1/1:1,12:13:9.03:126,9,0	0/1:0,1:1:0:0,0,0	1/1:3,9:12:13.58:207,14,0	1/1:2,2:4:6.02:84,6,0	1/1:2,0:2:4.26:13,4,0	1/1:0,2:2:6.02:84,6,0
chr10	63231072	.	CAG	C	261.86	PASS	AB=0.826;AC=21;AF=0.477;AN=44;BaseQRankSum=-3.379;DP=230;FS=1.179;HRun=0;HaplotypeScore=119.7177;InbreedingCoeff=0.3060;MQ=87.66;MQ0=3;MQRankSum=-1.592;QD=3.15;ReadPosRankSum=0.785;VQSLOD=2.6967;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:1,3:4:0:0,0,0	0/0:6,0:6:12.04:0,12,159	0/1:12,0:8:37.83:38,0,93	0/0:37,2:25:1.66:0,2,157	0/1:8,3:11:0.02:0,0,0	./.	0/1:2,1:3:0.11:0,0,34	1/1:1,1:2:3.01:34,3,0	1/1:0,1:1:2.96:19,3,0	0/1:9,3:12:77:77,0,225	0/0:10,1:11:6:0,6,63	./.	1/1:3,3:6:4.92:13,5,0	./.	1/1:2,5:7:4.36:11,4,0	1/1:0,4:4:2.84:14,3,0	0/1:2,0:2:0:0,0,0	./.	1/1:4,1:6:5.88:48,6,0	0/0:28,4:31:33.97:0,34,427	./.	0/0:10,7:17:6.29:0,6,90	0/0:12,5:17:9.01:0,9,113	./.	0/0:16,0:16:9.43:0,9,184	0/1:6,1:7:26.41:26,0,75	1/1:2,3:5:10.91:115,11,0	0/0:3,0:3:6.02:0,6,80
chr10	63231075	.	AG	A	292.24	PASS	AB=0.863;AC=18;AF=0.375;AN=48;BaseQRankSum=-1.142;DP=237;FS=1.177;HRun=1;HaplotypeScore=118.6000;InbreedingCoeff=0.0715;MQ=89.44;MQ0=3;MQRankSum=-2.238;QD=2.27;ReadPosRankSum=2.415;VQSLOD=-0.4764;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:4:0.94:0,1,2	0/0:6,0:6:15.05:0,15,227	0/0:17,0:9:0.37:0,0,121	0/1:40,0:26:46.95:47,0,189	0/0:8,3:11:0.13:0,0,1	0/0:2,0:2:0:0,0,1	0/1:3,1:4:10.77:11,0,42	1/1:3,0:3:2.04:6,2,0	1/1:1,0:1:2.97:20,3,0	0/1:10,2:12:75.09:75,0,272	0/0:10,0:10:6.02:0,6,96	./.	1/1:3,3:6:1.81:52,2,0	0/0:1,0:1:0.47:0,0,1	0/1:5,2:7:3.27:10,0,3	0/0:4,0:4:2.84:0,3,16	1/1:0,2:2:5.93:39,6,0	./.	0/1:7,0:7:5.43:5,0,13	0/0:28,2:29:29.12:0,29,521	./.	0/1:14,3:17:3.52:4,0,134	0/0:16,1:17:9.86:0,10,146	./.	0/1:13,3:16:13.20:13,0,218	0/1:5,2:7:35.84:36,0,85	1/1:3,2:5:12.94:105,13,0	0/0:3,0:3:6.02:0,6,96
chr10	63231095	.	C	CA	683.13	PASS	AB=0.847;AC=22;AF=0.500;AN=44;BaseQRankSum=-2.509;DP=202;FS=2.433;HRun=1;HaplotypeScore=102.6436;InbreedingCoeff=-0.0469;MQ=99.42;MQ0=3;MQRankSum=-2.962;QD=4.55;ReadPosRankSum=-0.956;VQSLOD=-0.0012;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/0:6,0:6:17.90:0,18,132	0/0:17,0:10:11.72:0,12,114	0/1:39,0:27:33.36:33,0,336	0/1:3,3:6:0.01:1,0,0	0/1:2,0:2:0:1,0,0	0/1:2,1:3:33.83:36,0,34	0/0:7,0:7:14.92:0,15,120	1/1:1,0:1:3:26,3,0	0/1:10,2:11:94.99:95,0,131	0/0:8,0:8:6.17:0,6,45	./.	1/1:2,3:5:9.03:140,9,0	./.	1/1:2,2:4:6.02:92,6,0	0/1:3,0:3:0:1,0,0	1/1:0,2:2:6.02:95,6,0	./.	0/0:8,0:8:5.47:0,5,30	0/1:16,2:17:28.10:28,0,125	./.	0/1:9,3:12:31.27:31,0,73	0/1:13,1:14:5.37:5,0,73	./.	0/1:12,3:15:65.96:66,0,111	0/1:3,2:5:27.70:42,0,28	0/1:3,2:5:18.32:105,0,18	1/1:2,0:2:2.98:21,3,0
chr10	63231103	.	A	ACAG	649.20	PASS	AB=0.966;AC=16;AF=0.421;AN=38;BaseQRankSum=-2.406;DP=166;FS=16.887;HRun=0;HaplotypeScore=108.4249;InbreedingCoeff=0.2060;MQ=95.81;MQ0=4;MQRankSum=-0.316;QD=7.38;ReadPosRankSum=-1.747;VQSLOD=1.3859;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/0:6,0:6:18.06:0,18,335	0/0:15,0:9:13.39:0,13,150	0/1:28,0:21:60.38:60,0,154	0/1:3,0:3:0:0,0,0	./.	0/1:4,0:4:45.16:45,0,50	0/0:6,0:6:12.04:0,12,223	1/1:0,1:1:3.01:56,3,0	0/1:9,1:9:99:150,0,242	0/0:11,0:11:14.68:0,15,156	./.	1/1:3,1:4:9.02:122,9,0	./.	1/1:2,1:3:6.02:106,6,0	./.	0/0:2,0:2:0.74:0,1,9	./.	0/0:7,0:7:3.01:0,3,56	0/0:16,0:14:31.33:0,31,532	./.	0/1:8,0:8:32.23:32,0,218	0/0:10,0:11:15.01:0,15,215	./.	0/1:15,0:15:14.23:14,0,457	1/1:5,0:5:2.60:10,3,0	1/1:2,1:3:9.03:187,9,0	./.
chr10	63231161	.	CACGCCAGATGG	C	1115.58	PASS	AB=1.000;AC=15;AF=0.833;AN=18;BaseQRankSum=1.645;DP=67;FS=7.732;HRun=0;HaplotypeScore=91.4199;MQ=91.23;MQ0=0;MQRankSum=-3.320;QD=25.94;ReadPosRankSum=1.184;VQSLOD=2.0634;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	1/1:4,0:4:4.20:22,4,0	0/1:7,0:3:4.93:5,0,38	0/0:7,0:6:10.57:0,11,140	./.	./.	./.	./.	./.	1/1:4,1:4:9.03:211,9,0	1/1:3,1:4:2.94:18,3,0	./.	./.	./.	./.	./.	./.	./.	./.	1/1:4,1:4:9.03:210,9,0	./.	./.	./.	./.	1/1:10,2:12:24.01:433,24,0	1/1:3,1:4:12.04:214,12,0	./.	1/1:2,0:2:6.02:94,6,0
chr10	63231362	.	AG	A	784.05	PASS	AB=0.625;AC=30;AF=0.750;AN=40;BaseQRankSum=2.101;DP=115;FS=37.806;HRun=1;HaplotypeScore=68.5238;InbreedingCoeff=0.2899;MQ=88.66;MQ0=2;MQRankSum=-3.408;QD=9.68;ReadPosRankSum=0.653;VQSLOD=-0.6573;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,2:2:3:26,3,0	./.	0/1:17,0:9:22.70:23,0,29	0/0:23,0:16:18.89:0,19,176	0/1:0,6:6:0:0,0,0	1/1:0,3:3:4.56:46,5,0	./.	./.	1/1:0,7:7:8.69:125,9,0	1/1:0,5:3:6.02:69,6,0	./.	1/1:0,9:6:5.79:83,6,0	0/1:0,1:1:0:0,0,0	0/1:0,4:3:0.11:0,0,0	./.	./.	1/1:0,2:2:6.02:65,6,0	./.	1/1:0,2:2:6.02:84,6,0	1/1:0,2:2:3.01:42,3,0	0/0:2,1:3:0:0,0,0	1/1:0,6:6:3.01:42,3,0	./.	0/0:0,3:3:0:0,0,0	1/1:0,6:6:1.76:6,2,0	1/1:0,4:3:9.03:109,9,0	1/1:0,4:4:9.03:125,9,0	1/1:0,1:1:3.01:39,3,0
chr10	63231370	.	AG	A	120	PASS	AB=0.583;AC=24;AF=0.706;AN=34;BaseQRankSum=2.268;DP=65;FS=5.190;HRun=1;HaplotypeScore=57.9426;InbreedingCoeff=0.2341;MQ=97.58;MQ0=2;MQRankSum=-3.010;QD=2.55;ReadPosRankSum=1.938;VQSLOD=-0.5353;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,2:2:2.22:7,2,0	./.	0/0:8,0:5:3.89:0,4,30	0/1:13,0:10:18.46:18,0,101	./.	1/1:0,2:2:1.55:4,2,0	./.	./.	1/1:0,5:5:2.84:19,3,0	1/1:0,1:1:2.99:24,3,0	./.	0/1:0,4:2:0:0,0,0	0/1:0,1:1:0:0,0,0	0/1:0,4:3:0:0,0,0	./.	./.	1/1:0,2:2:6:51,6,0	./.	1/1:0,2:2:5.91:54,6,0	./.	0/0:0,3:3:0:0,0,0	0/1:0,2:2:0:0,0,0	./.	0/1:0,3:3:0.08:0,0,0	1/1:1,2:3:2.04:6,2,0	1/1:0,1:1:2.37:8,2,0	1/1:0,2:2:2.80:13,3,0	./.
chr10	63231379	.	AG	A	100.38	PASS	AB=0.669;AC=24;AF=0.706;AN=34;BaseQRankSum=2.486;DP=57;FS=4.301;HRun=1;HaplotypeScore=53.1875;InbreedingCoeff=0.2435;MQ=98.44;MQ0=0;MQRankSum=-1.152;QD=2.45;ReadPosRankSum=0.910;VQSLOD=-0.6961;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,2:2:2.22:7,2,0	./.	0/0:6,1:6:4.04:0,4,48	0/1:5,2:5:24.13:24,0,48	./.	1/1:0,2:2:1.55:4,2,0	./.	./.	1/1:1,4:5:2.76:16,3,0	1/1:0,0:1:1.55:4,2,0	./.	0/1:0,3:2:0:0,0,0	0/1:0,1:1:0:0,0,0	0/1:0,2:3:0:0,0,0	./.	./.	1/1:0,1:2:5.98:48,6,0	./.	1/1:0,0:2:5.91:55,6,0	./.	0/0:0,2:3:0:0,0,0	0/1:0,2:2:0:0,0,0	./.	0/1:0,0:3:0.08:0,0,0	1/1:0,2:3:2.04:6,2,0	1/1:0,0:1:2.37:8,2,0	1/1:0,1:2:2.80:13,3,0	./.
chr10	63231431	.	ACTGATG	A	475.29	PASS	AB=0.860;AC=17;AF=0.340;AN=50;BaseQRankSum=1.385;DP=189;FS=0.000;HRun=0;HaplotypeScore=131.9312;InbreedingCoeff=-0.0376;MQ=63.84;MQ0=2;MQRankSum=-1.681;QD=5.22;ReadPosRankSum=-2.392;VQSLOD=1.6447;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:8,0:8:5.08:30,0,5	1/1:2,0:2:0.89:2,1,0	0/0:21,0:6:18.05:0,18,267	0/0:15,0:6:12.04:0,12,306	0/0:8,0:8:0:0,0,0	0/1:10,0:10:8.09:8,0,95	./.	./.	0/1:7,0:7:5.82:6,0,85	0/1:4,2:7:15.58:179,0,16	./.	0/0:6,1:7:14.26:0,14,177	1/1:4,2:7:11.06:129,11,0	0/1:8,1:9:16.91:17,0,178	0/0:7,1:7:2.54:0,3,12	0/1:4,1:5:23.20:105,0,23	0/0:6,1:7:12.25:0,12,177	0/0:2,0:2:6.02:0,6,85	0/1:4,1:5:67.81:78,0,68	0/1:7,1:8:0:0,0,0	0/0:14,2:15:1.26:0,1,4	0/0:2,1:3:1.55:0,2,4	0/1:3,2:5:0.10:0,0,0	0/1:4,1:5:0.21:0,0,0	0/0:5,2:6:0.35:0,0,2	0/1:3,0:3:23.02:23,0,70	0/1:6,1:6:16.84:17,0,84	0/1:1,2:3:4.44:5,0,4
chr10	63231432	.	CTG	C	62.87	PASS	AB=0.848;AC=16;AF=0.320;AN=50;BaseQRankSum=1.445;DP=186;FS=0.000;HRun=0;HaplotypeScore=127.5793;InbreedingCoeff=0.0457;MQ=64.26;MQ0=3;MQRankSum=-3.243;QD=0.70;ReadPosRankSum=-2.478;VQSLOD=1.8191;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:8,0:8:5.48:6,0,5	1/1:1,1:2:0.89:2,1,0	0/1:20,1:6:9.95:10,0,172	0/0:16,1:6:12.04:0,12,187	0/0:6,1:7:0:0,0,0	0/1:8,1:9:9.11:9,0,46	./.	./.	0/0:7,0:7:8.89:0,9,74	0/1:6,1:7:23.98:33,0,24	./.	0/0:7,0:7:13.39:0,13,105	1/1:5,1:7:7.92:36,8,0	0/0:9,0:9:14.67:0,15,124	0/0:8,0:7:2.91:0,3,17	0/1:4,1:5:23.08:27,0,23	0/0:6,0:7:13.80:0,14,113	0/0:2,0:2:6.01:0,6,61	0/1:5,0:5:33.09:33,0,44	0/0:7,1:8:0:0,0,0	0/0:11,3:13:2.85:0,3,20	0/1:1,1:3:0:0,0,0	0/1:4,1:5:0.01:0,0,0	0/1:1,3:5:0.11:0,0,0	0/0:7,0:6:0.77:0,1,2	0/1:2,1:3:12.57:13,0,14	0/1:6,1:6:2.76:3,0,55	0/1:3,0:3:1.28:9,0,1
chr10	63231435	.	ATG	A	95.34	PASS	AB=0.852;AC=14;AF=0.280;AN=50;BaseQRankSum=2.138;DP=189;FS=0.000;HRun=0;HaplotypeScore=127.5994;InbreedingCoeff=0.2328;MQ=63.75;MQ0=3;MQRankSum=-3.187;QD=1.67;ReadPosRankSum=-1.042;VQSLOD=1.9550;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:8,0:8:5.48:6,0,5	1/1:2,0:2:0.89:2,1,0	0/0:24,0:6:14.72:0,15,179	0/0:17,0:6:12.04:0,12,217	0/0:7,0:7:0:0,0,0	0/0:8,1:9:8.49:0,8,64	./.	./.	0/0:7,0:7:8.57:0,9,52	0/1:7,0:7:19.80:27,0,20	./.	0/0:7,0:7:8.36:0,8,47	1/1:6,0:7:8.30:43,8,0	0/0:9,0:9:14.51:0,15,84	0/0:8,0:7:2.91:0,3,17	0/1:5,0:5:6.41:32,0,6	0/0:7,0:7:12.98:0,13,57	0/0:2,0:2:5.42:0,5,23	0/1:4,1:5:9.83:60,0,10	0/0:7,1:8:0:0,0,0	0/0:10,4:13:0.77:0,1,2	0/1:2,1:3:0:0,0,0	0/1:4,1:5:0.01:0,0,0	0/1:2,3:5:0.11:0,0,0	0/0:7,0:6:0.77:0,1,2	0/0:2,0:3:1.82:0,2,11	0/1:5,2:6:4.29:4,0,18	1/1:3,0:3:0.94:34,1,0
chr10	63231453	.	CCGG	C	1009.66	PASS	AB=0.851;AC=29;AF=0.558;AN=52;BaseQRankSum=0.600;DP=236;FS=0.000;HRun=0;HaplotypeScore=134.5379;InbreedingCoeff=0.1879;MQ=44.83;MQ0=7;MQRankSum=1.110;QD=6.47;ReadPosRankSum=-0.537;VQSLOD=2.9153;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:8,2:9:1:29,0,1	1/1:0,2:3:8.03:76,8,0	1/1:20,0:2:0.47:1,0,0	0/0:23,1:6:11.95:0,12,135	0/0:6,3:9:0.47:0,0,1	0/1:9,0:9:12.31:12,0,28	0/0:0,1:2:2.84:0,3,14	./.	0/1:7,1:11:12.07:12,0,75	1/1:4,1:7:4.78:103,5,0	./.	0/0:6,2:9:11.23:0,11,75	1/1:0,6:8:10.17:134,10,0	0/1:10,1:12:49.02:54,0,49	0/0:7,2:9:1.64:0,2,5	1/1:4,0:5:6.49:147,6,0	0/0:4,1:7:3.54:0,4,35	1/1:2,1:3:3.73:43,4,0	1/1:2,2:5:4.24:129,4,0	1/1:8,1:10:2.71:29,3,0	1/1:9,2:14:1.25:3,1,0	0/0:0,5:6:0.47:0,0,1	0/0:1,5:6:0.42:0,0,1	0/1:1,2:4:0:0,0,0	1/1:9,2:12:2.82:103,3,0	0/1:3,1:6:28.39:73,0,28	0/1:4,1:5:1.91:66,0,2	1/1:1,2:3:5.89:128,6,0
chr10	63231457	.	ACG	A	306.18	PASS	AB=0.656;AC=29;AF=0.580;AN=50;BaseQRankSum=0.994;DP=239;FS=3.979;HRun=0;HaplotypeScore=132.6598;InbreedingCoeff=0.1667;MQ=41.25;MQ0=12;MQRankSum=0.951;QD=2.16;ReadPosRankSum=-1.051;VQSLOD=2.2630;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:5,5:9:5.51:6,0,6	1/1:3,1:3:3.28:9,3,0	./.	0/0:26,0:5:5.97:0,6,57	0/0:2,8:9:0:0,0,0	0/1:1,8:9:0.03:3,0,0	0/0:2,1:2:1.82:0,2,5	./.	0/0:7,4:11:9.43:0,9,52	0/1:3,4:7:0.51:17,0,1	./.	0/1:5,5:9:10.01:10,0,10	1/1:5,3:8:0.05:29,0,0	1/1:4,7:11:1.64:26,2,0	0/0:3,7:9:0.58:0,1,2	1/1:1,5:5:8.87:64,9,0	0/1:4,2:6:9.09:9,0,19	1/1:1,3:4:6.42:47,6,0	1/1:2,4:5:6.14:37,6,0	1/1:3,7:10:2.60:15,3,0	1/1:8,6:13:1.25:3,1,0	0/0:2,4:6:0:0,0,0	0/1:3,4:6:0.01:0,0,0	0/0:3,2:5:0:0,0,0	1/1:4,9:12:5.44:29,5,0	0/1:4,2:6:36.30:48,0,36	1/1:2,4:5:3.37:26,3,0	1/1:2,0:3:1.53:44,2,0
chr10	63231473	.	C	CCA	493.41	PASS	AB=0.869;AC=37;AF=0.712;AN=52;BaseQRankSum=1.643;DP=427;FS=20.019;HRun=0;HaplotypeScore=177.2189;InbreedingCoeff=0.1905;MQ=33.13;MQ0=28;MQRankSum=-0.865;QD=1.61;ReadPosRankSum=0.553;VQSLOD=1.5669;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:13:2.40:0,2,19	0/1:7,2:7:3.32:42,0,3	0/0:29,0:1:3.01:0,3,31	./.	0/1:13,0:12:0:0,0,0	1/1:14,0:16:6.65:34,7,0	1/1:11,0:10:3.48:38,3,0	0/1:20,0:19:2.68:90,0,3	0/1:18,0:22:11.71:27,0,12	1/1:12,0:11:8.04:24,8,0	./.	1/1:16,0:15:0.47:2,0,0	1/1:9,7:16:5.21:12,5,0	1/1:19,0:19:2.39:11,2,0	1/1:12,0:12:0.46:1,0,0	1/1:10,0:9:5.35:30,5,0	0/0:8,4:13:5.68:0,6,48	0/1:7,4:11:2.72:82,0,3	1/1:12,0:12:1.25:3,1,0	1/1:11,0:11:2.54:11,3,0	0/0:25,0:26:0.19:0,0,0	1/1:12,2:13:3.01:45,3,0	1/1:10,3:11:0.47:1,0,0	0/1:6,3:12:9.52:39,0,10	0/1:18,0:17:0.11:0,0,0	1/1:14,0:13:10.87:54,11,0	1/1:11,0:9:7.48:37,7,0	1/1:5,0:5:5.34:28,5,0
chr10	63231477	.	A	ACAC	1319.85	PASS	AB=0.940;AC=31;AF=0.574;AN=54;BaseQRankSum=0.886;DP=475;FS=5.787;HRun=0;HaplotypeScore=185.1920;InbreedingCoeff=-0.0905;MQ=31.36;MQ0=28;MQRankSum=1.162;QD=3.77;ReadPosRankSum=-0.592;VQSLOD=2.0880;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:17,0:15:32.20:52,0,32	0/1:10,0:8:2.64:4,0,3	0/0:30,0:2:6.02:0,6,85	0/0:31,0:4:8.79:0,9,66	0/0:14,0:13:0.44:0,0,1	1/1:15,2:16:2.55:146,3,0	0/0:7,6:13:3.03:0,3,32	0/1:23,0:20:62.14:62,0,145	1/1:26,2:29:4.62:173,5,0	1/1:12,1:12:13.03:113,13,0	./.	1/1:10,4:18:0.89:4,1,0	0/1:21,0:20:34.34:34,0,95	1/1:15,6:20:10.68:134,11,0	1/1:10,4:14:2.66:9,3,0	0/1:7,1:8:20.96:124,0,21	0/1:15,0:14:22.65:23,0,95	0/1:12,0:12:11.32:11,0,18	0/1:15,0:14:52.74:53,0,65	1/1:9,3:11:2.88:13,3,0	1/1:28,2:28:3.95:41,4,0	1/1:15,0:14:3.73:13,4,0	0/0:14,0:12:0.78:0,1,2	0/0:17,0:16:1.12:0,1,44	1/1:16,3:17:19.08:121,19,0	0/1:14,2:16:99:126,0,107	0/1:9,1:9:7.94:120,0,8	0/1:5,1:6:38.34:86,0,38
chr10	63233525	.	CT	C	1687.46	PASS	AB=0.600;AC=7;AF=0.125;AN=56;BaseQRankSum=3.168;DP=655;FS=1.470;HRun=10;HaplotypeScore=89.4358;InbreedingCoeff=0.7890;MQ=65.82;MQ0=0;MQRankSum=1.646;QD=16.54;ReadPosRankSum=-0.883;VQSLOD=3.6874;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:79.06:0,79,489	1/1:0,10:10:26.84:234,27,0	0/0:16,0:16:29.99:0,30,305	0/0:13,0:9:17.41:0,17,171	0/0:39,0:39:81.89:0,82,551	0/0:15,1:16:13.04:0,13,365	0/0:36,1:38:69.89:0,70,933	1/1:12,18:30:53.91:461,54,0	0/0:12,2:14:7.03:0,7,305	0/0:34,1:35:51.95:0,52,772	0/0:17,0:17:36.10:0,36,398	0/0:30,1:31:49.12:0,49,753	0/0:12,0:12:30.08:0,30,331	0/0:37,0:37:90.24:0,90,996	0/0:20,0:20:48.10:0,48,513	0/0:23,0:23:63.13:0,63,683	1/1:1,34:35:89.98:781,90,0	0/1:9,18:27:42.58:360,0,43	0/0:25,0:27:56.70:0,57,539	0/0:19,0:18:46.34:0,46,489	0/0:27,0:28:62.97:0,63,664	0/0:24,0:24:57.07:0,57,602	0/0:4,0:4:9.02:0,9,100	0/0:26,0:26:60.55:0,61,648	0/0:20,0:20:42.11:0,42,457	0/0:23,0:23:54.15:0,54,597	0/0:19,0:19:48.13:0,48,526	0/0:18,0:18:45.11:0,45,489
chr10	63233842	.	G	GTT	6313.98	PASS	AB=1.000;AC=44;AF=0.786;AN=56;BaseQRankSum=1.062;DP=555;FS=4.360;HRun=14;HaplotypeScore=95.7636;InbreedingCoeff=0.7286;MQ=65.64;MQ0=20;MQRankSum=-3.671;QD=14.09;ReadPosRankSum=-2.007;VQSLOD=3.6988;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:18,19:38:44.92:638,45,0	0/1:4,0:4:0:0,0,0	0/1:27,0:21:5.42:15,0,5	0/0:14,0:11:4.62:0,5,18	1/1:15,11:30:42.79:361,43,0	1/1:5,9:15:26.45:323,26,0	1/1:2,3:10:22.15:197,22,0	0/0:27,0:27:1.29:0,1,220	0/0:16,2:19:32.74:0,33,271	1/1:15,7:32:30.60:517,31,0	1/1:13,2:16:17.39:177,17,0	1/1:10,6:17:30.92:325,31,0	1/1:9,2:19:24:238,24,0	1/1:10,9:18:21.07:266,21,0	1/1:11,9:22:0.80:204,1,0	1/1:7,4:17:27.47:272,27,0	0/0:24,0:26:46.56:0,47,335	0/0:12,0:15:14.49:0,14,161	1/1:18,4:25:37.58:377,38,0	1/1:2,6:11:26.39:279,26,0	1/1:2,4:7:11.36:107,11,0	1/1:11,0:20:26.87:231,27,0	1/1:3,0:7:9.01:89,9,0	1/1:5,1:11:16.77:151,17,0	1/1:8,9:21:40.68:399,41,0	1/1:15,7:26:27.70:471,28,0	1/1:10,8:21:22.31:412,22,0	1/1:6,7:12:23.41:265,23,0
chr10	63235581	.	A	AG	2011.16	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-5.674;DP=578;FS=8.145;HRun=6;HaplotypeScore=56.1476;InbreedingCoeff=0.9773;MQ=72.23;MQ0=3;MQRankSum=-0.370;QD=30.02;ReadPosRankSum=0.405;VQSLOD=4.0606;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,18:18:36.11:448,36,0	0/0:12,0:11:27.05:0,27,270	0/0:13,0:13:21.01:0,21,205	0/0:17,0:16:32.31:0,32,355	1/1:0,27:27:81.21:989,81,0	0/0:18,0:18:45.10:0,45,459	0/0:33,0:33:72.15:0,72,729	0/0:21,0:21:48.07:0,48,478	1/1:1,21:22:57.18:717,57,0	0/0:27,0:27:81.13:0,81,802	0/0:12,0:12:36.08:0,36,367	0/0:16,0:16:48.11:0,48,489	0/0:11,0:11:30.07:0,30,306	0/0:20,0:20:54.12:0,54,551	0/0:19,0:19:51.11:0,51,520	0/0:16,0:16:42.09:0,42,428	0/0:30,0:30:87.18:0,87,879	0/0:31,0:29:75.16:0,75,764	0/0:17,0:17:42.06:0,42,413	0/0:13,0:13:33.07:0,33,336	0/0:51,0:50:99:0,132,1339	0/0:24,0:24:69.16:0,69,703	0/0:24,0:24:63.13:0,63,638	0/0:19,0:19:45.10:0,45,459	0/0:19,0:19:48.07:0,48,474	0/0:17,0:17:42.09:0,42,428	0/0:25,0:25:69.15:0,69,704	0/0:6,0:6:9.02:0,9,92
chr10	63235669	.	ACC	A	2988.21	PASS	AB=0.865;AC=22;AF=0.393;AN=56;BaseQRankSum=7.307;DP=416;FS=9.519;HRun=2;HaplotypeScore=69.2808;InbreedingCoeff=-0.6858;MQ=50.79;MQ0=11;MQRankSum=-3.695;QD=8.81;ReadPosRankSum=4.144;VQSLOD=0.1430;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:21,3:20:99:111,0,168	0/1:8,0:6:84.68:85,0,89	0/0:18,0:15:45.03:0,45,695	0/0:11,0:10:24.08:0,24,426	0/1:14,1:12:90.98:91,0,226	0/1:9,12:19:99:293,0,192	0/0:10,0:8:2.85:0,3,27	0/1:24,4:19:85.53:181,0,86	0/1:7,8:14:99:287,0,116	0/1:13,0:13:15.95:16,0,449	0/1:7,3:10:87.54:88,0,215	0/1:18,6:22:99:379,0,258	0/1:7,0:6:24.87:25,0,109	0/1:11,5:12:99:272,0,119	0/0:13,0:11:3:0,3,25	0/0:12,0:12:12.03:0,12,196	0/1:14,1:12:99:149,0,177	0/1:17,5:17:78.99:245,0,79	0/1:13,6:17:99:175,0,455	0/1:10,0:10:14.87:15,0,99	0/1:7,0:6:28.86:48,0,29	0/1:13,0:13:39.27:39,0,241	0/1:10,1:9:25.58:26,0,169	0/1:11,1:10:98.45:120,0,98	0/1:11,2:12:55.72:56,0,217	0/1:8,3:7:99:125,0,115	0/1:15,10:18:99:320,0,164	0/0:13,0:11:9.01:0,9,84
chr10	63235671	.	C	CAAAAAAAAAAAAAA	22381.84	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-0.259;DP=450;FS=13.924;HRun=6;HaplotypeScore=150.8398;InbreedingCoeff=0.7032;MQ=51.81;MQ0=8;MQRankSum=-6.320;QD=53.29;ReadPosRankSum=0.674;VQSLOD=0.9895;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:24,1:21:49.72:1944,50,0	1/1:8,0:6:15.05:486,15,0	0/0:19,0:16:40.25:0,40,847	0/0:11,0:10:22.82:0,23,686	1/1:14,1:12:27.09:983,27,0	1/1:20,0:19:39.10:1102,39,0	1/1:0,0:9:3.42:140,3,0	1/1:30,0:21:36.11:1295,36,0	1/1:17,0:16:33.11:1142,33,0	1/1:8,0:23:39.10:1371,39,0	1/1:10,0:10:21.03:594,21,0	1/1:23,0:21:45.15:1462,45,0	1/1:8,0:7:18.06:689,18,0	1/1:16,0:12:27.09:1073,27,0	1/1:0,0:15:2.36:6,2,0	1/1:3,0:15:3.01:160,3,0	1/1:15,0:12:24.07:834,24,0	1/1:22,0:17:42.62:1897,43,0	1/1:19,0:18:42.07:1489,42,0	1/1:1,0:13:15.05:501,15,0	1/1:2,0:7:6.02:311,6,0	1/1:11,0:11:18.06:755,18,0	1/1:9,0:7:15.05:512,15,0	1/1:12,0:10:21.07:748,21,0	1/1:9,0:18:9.03:319,9,0	1/1:12,0:8:18.05:573,18,0	1/1:24,0:17:42.62:1535,43,0	1/1:1,0:17:9.03:462,9,0
chr10	63236542	.	AT	A	885.91	PASS	AB=0.632;AC=8;AF=0.143;AN=56;BaseQRankSum=2.192;DP=455;FS=4.077;HRun=12;HaplotypeScore=81.7800;InbreedingCoeff=0.5551;MQ=59.63;MQ0=3;MQRankSum=2.680;QD=9.95;ReadPosRankSum=1.003;VQSLOD=3.2772;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:26.52:0,27,182	0/0:7,0:7:10.13:0,10,44	0/0:16,0:11:11.23:0,11,146	0/0:13,0:10:17.99:0,18,163	0/0:15,0:15:16.09:0,16,105	0/0:19,0:20:50.94:0,51,501	0/0:20,0:20:45.09:0,45,457	0/0:15,0:14:3.33:0,3,20	0/0:9,0:9:10.50:0,10,47	0/0:23,0:23:35.53:0,36,399	0/0:16,0:16:39.04:0,39,384	0/0:13,0:13:27.05:0,27,274	1/1:1,10:11:20.91:163,21,0	0/0:22,3:25:7.60:0,8,427	0/0:14,0:14:30.05:0,30,298	0/0:11,0:11:30.06:0,30,305	0/0:12,0:11:5.60:0,6,26	0/0:15,0:15:6.47:0,6,27	0/1:12,13:25:9.82:266,0,10	0/0:13,0:13:24.03:0,24,237	0/0:17,0:18:50.90:0,51,490	1/1:2,8:10:17.90:139,18,0	1/1:5,13:18:28.83:231,29,0	0/1:9,14:23:18.98:237,0,19	0/0:11,0:11:0.78:0,1,181	0/0:16,2:16:15.27:0,15,326	0/0:13,0:14:29.80:0,30,267	0/0:19,1:20:14.59:0,15,347
chr10	63236548	.	T	TTTTTC	2043.65	PASS	AB=0.842;AC=13;AF=0.232;AN=56;BaseQRankSum=7.899;DP=448;FS=6.056;HRun=0;HaplotypeScore=121.8614;InbreedingCoeff=0.7754;MQ=58.67;MQ0=4;MQRankSum=-8.183;QD=19.84;ReadPosRankSum=-2.583;VQSLOD=2.6312;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:20,6:26:56.71:921,57,0	1/1:8,0:10:21.17:216,21,0	0/0:15,0:10:13.45:0,13,280	0/0:9,0:7:14.84:0,15,190	1/1:11,5:16:34.93:635,35,0	0/0:20,0:20:54.16:0,54,922	0/0:21,0:20:57.05:0,57,895	1/1:15,0:13:6.73:43,7,0	1/1:6,1:7:2.48:193,2,0	0/0:21,0:21:45.73:0,46,759	0/0:16,0:16:41.86:0,42,697	0/0:14,0:14:36.07:0,36,575	0/0:12,0:12:20.55:0,21,281	0/0:24,0:24:63.11:0,63,994	0/0:12,0:12:36.06:0,36,573	0/0:12,0:12:33.10:0,33,595	1/1:10,0:12:0.51:113,1,0	0/1:13,0:15:23.41:92,0,23	0/0:24,0:22:18.44:0,18,596	0/0:13,0:13:33.01:0,33,495	0/0:19,0:19:57.05:0,57,904	0/0:9,0:9:21.06:0,21,261	0/0:18,0:18:18.97:0,19,452	0/0:24,0:23:48.07:0,48,613	0/0:11,0:11:29.55:0,30,415	0/0:19,0:16:40.35:0,40,647	0/0:14,0:14:35.97:0,36,515	0/0:18,0:16:40.94:0,41,710
chr10	63236553	.	TTC	T	288.40	PASS	AB=0.957;AC=9;AF=0.161;AN=56;BaseQRankSum=5.898;DP=431;FS=0.699;HRun=0;HaplotypeScore=80.1403;InbreedingCoeff=0.3201;MQ=58.32;MQ0=6;MQRankSum=-3.943;QD=3.24;ReadPosRankSum=-4.565;VQSLOD=0.6522;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:21,0:20:17.45:30,0,17	1/1:9,1:10:7.85:94,8,0	0/0:19,0:12:26.02:0,26,282	0/0:13,0:7:19.92:0,20,206	0/1:15,0:15:17.88:40,0,18	0/0:20,0:20:57.15:0,57,804	0/0:22,0:20:51.11:0,51,756	0/1:9,1:8:26.59:27,0,43	0/1:7,0:7:3.49:19,0,3	0/0:20,0:20:51.63:0,52,607	0/0:16,0:16:40.25:0,40,545	0/0:12,0:12:36.05:0,36,488	0/0:12,0:12:19.67:0,20,94	0/0:23,0:23:56.68:0,57,772	0/0:12,0:12:32.92:0,33,445	0/0:12,0:12:33.11:0,33,503	1/1:10,2:11:4.18:89,4,0	0/1:12,2:13:52.08:130,0,52	0/0:21,0:18:22.60:0,23,216	0/0:12,0:12:30:0,30,418	0/0:19,0:19:50.75:0,51,710	0/0:9,0:9:19.17:0,19,91	0/0:17,0:17:19.76:0,20,198	0/0:21,0:20:42.84:0,43,247	0/0:12,0:12:32.73:0,33,371	0/0:19,0:16:46.20:0,46,594	0/0:13,0:13:29.86:0,30,411	0/0:18,0:16:32.32:0,32,548
chr10	63236555	.	C	CTT	1271.63	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=9.592;DP=432;FS=3.696;HRun=12;HaplotypeScore=80.1886;InbreedingCoeff=0.9346;MQ=57.66;MQ0=7;MQRankSum=-8.194;QD=14.45;ReadPosRankSum=-2.457;VQSLOD=2.2058;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:14,7:20:43.84:519,44,0	1/1:7,2:9:8.87:74,9,0	0/0:19,0:12:24.75:0,25,269	0/0:16,0:8:14.83:0,15,165	1/1:11,6:17:22.66:397,23,0	0/0:20,0:20:54.12:0,54,678	0/0:21,0:19:51.05:0,51,628	1/1:8,0:6:2.74:13,3,0	1/1:4,3:7:14.38:174,14,0	0/0:19,0:19:41.83:0,42,513	0/0:17,0:17:38.98:0,39,485	0/0:12,0:12:36.10:0,36,460	0/0:13,0:12:20.79:0,21,268	0/0:23,0:23:60.16:0,60,745	0/0:13,0:12:33.07:0,33,402	0/0:12,0:12:33.11:0,33,437	1/1:9,3:11:10.65:129,11,0	1/1:11,3:13:15.08:151,15,0	0/0:23,0:19:50.91:0,51,568	0/0:12,0:12:33.09:0,33,417	0/0:17,0:17:29.27:0,29,603	0/0:9,0:9:21.01:0,21,231	0/0:16,0:16:39.11:0,39,487	0/0:21,0:20:42.12:0,42,520	0/0:11,0:11:27.08:0,27,354	0/0:19,0:16:41.59:0,42,522	0/0:11,0:11:30.09:0,30,374	0/0:18,0:16:20.56:0,21,454
chr10	63236642	.	C	CT	74.64	PASS	AB=0.806;AC=5;AF=0.089;AN=56;BaseQRankSum=-0.156;DP=446;FS=19.020;HRun=0;HaplotypeScore=64.9764;InbreedingCoeff=0.2457;MQ=60.36;MQ0=6;MQRankSum=-1.528;QD=1.44;ReadPosRankSum=-2.221;VQSLOD=-0.3090;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:60.20:0,60,834	0/1:2,5:6:65.74:148,0,66	1/1:8,0:2:2.04:6,2,0	0/1:16,0:9:0.04:0,0,162	0/0:19,0:19:48.15:0,48,652	0/0:17,0:17:48.15:0,48,651	0/0:19,0:18:39.06:0,39,504	0/1:16,4:19:2.59:3,0,525	0/0:8,0:8:18.05:0,18,233	0/0:21,0:21:60.20:0,60,823	0/0:15,0:15:36.11:0,36,484	0/0:16,0:16:45.15:0,45,621	0/0:12,0:12:36.11:0,36,486	0/0:10,0:10:23.87:0,24,305	0/0:18,0:18:48.15:0,48,654	0/0:20,0:20:54.14:0,54,701	0/0:27,1:28:33.57:0,34,1019	0/0:14,1:14:38.76:0,39,511	0/0:22,0:19:48.15:0,48,653	0/0:17,0:17:48.09:0,48,645	0/0:10,0:10:30.03:0,30,395	0/0:12,0:12:33.07:0,33,438	0/0:8,0:8:18.06:0,18,251	0/0:14,0:14:42.14:0,42,585	0/0:23,0:23:66.19:0,66,899	0/0:24,0:24:72.16:0,72,979	0/0:16,0:16:48.16:0,48,658	0/0:7,0:7:18.06:0,18,251
chr10	63236950	.	C	CGG	30525.31	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-14.658;DP=724;FS=2.978;HRun=1;HaplotypeScore=73.8681;InbreedingCoeff=0.9767;MQ=88.95;MQ0=0;MQRankSum=-7.560;QD=53.09;ReadPosRankSum=3.076;VQSLOD=4.9102;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,50:54:99:2679,132,0	1/1:0,3:3:9.03:183,9,0	0/0:27,0:27:78.24:0,78,1202	0/0:25,0:25:71.98:0,72,1119	1/1:1,26:27:69.19:1360,69,0	1/1:0,20:20:54.19:1097,54,0	1/1:0,22:22:63.11:1280,63,0	1/1:0,22:24:72.20:1315,72,0	1/1:0,26:26:75.26:1518,75,0	1/1:0,24:24:72.25:1462,72,0	1/1:1,18:21:54.19:1094,54,0	1/1:1,37:39:99:2212,111,0	0/0:25,0:25:72.25:0,72,1169	1/1:3,29:32:75.21:1464,75,0	1/1:0,39:40:99:2312,114,0	1/1:1,19:20:54.19:1096,54,0	1/1:2,31:33:90.31:1828,90,0	1/1:1,20:23:57.20:1157,57,0	1/1:2,13:19:51.09:880,51,0	1/1:1,16:17:45.07:831,45,0	1/1:1,52:55:99:2741,135,0	0/0:12,0:12:33.10:0,33,514	0/0:15,0:15:42.14:0,42,685	0/0:45,0:45:99:0,126,2032	1/1:1,13:14:36.08:690,36,0	1/1:0,24:25:75.26:1501,75,0	1/1:0,32:34:81.28:1643,81,0	1/1:0,3:3:9.03:183,9,0
chr10	63238539	.	T	TAC	36609.31	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-8.156;DP=822;FS=7.219;HRun=0;HaplotypeScore=94.1977;InbreedingCoeff=0.9708;MQ=85.02;MQ0=3;MQRankSum=-9.985;QD=47.48;ReadPosRankSum=6.566;VQSLOD=5.9867;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,45:48:99:2145,117,0	1/1:0,14:14:42.14:769,42,0	0/0:28,0:28:69.20:0,69,934	0/0:23,0:23:47.97:0,48,567	1/1:2,25:27:72.25:1310,72,0	1/1:0,27:27:78.27:1430,78,0	1/1:0,25:26:63.22:1155,63,0	1/1:2,31:35:99:1715,99,0	1/1:3,29:32:90.31:1647,90,0	1/1:0,40:41:99:2168,120,0	1/1:1,20:21:57.20:1041,57,0	1/1:4,26:30:69.24:1264,69,0	1/1:1,32:34:87.30:1594,87,0	1/1:1,36:37:99:1916,105,0	1/1:2,37:39:99:1858,102,0	1/1:0,19:19:51.17:935,51,0	1/1:1,41:42:99:2035,111,0	1/1:0,23:23:63.22:1155,63,0	1/1:2,18:20:54.17:958,54,0	1/1:1,21:22:60.21:1100,60,0	1/1:3,67:72:99:3244,178,0	1/1:1,24:26:60.21:1100,60,0	1/1:2,18:21:51.17:935,51,0	1/1:3,31:34:90.31:1650,90,0	1/1:3,24:26:62.95:1155,63,0	1/1:1,22:23:66.20:1178,66,0	1/1:1,21:21:54.17:989,54,0	1/1:2,4:6:9.03:162,9,0
chr10	63238761	.	CAGGA	C	4762.05	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=9.168;DP=727;FS=3.671;HRun=0;HaplotypeScore=128.3180;InbreedingCoeff=0.9969;MQ=72.47;MQ0=0;MQRankSum=-2.810;QD=35.54;ReadPosRankSum=1.788;VQSLOD=5.2015;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,108,2652	1/1:2,8:10:24.05:386,24,0	0/0:29,0:29:66.23:0,66,1473	0/0:12,0:12:30.10:0,30,670	0/0:11,0:11:24.08:0,24,587	0/0:19,0:19:48.16:0,48,1219	0/0:34,0:34:81.23:0,81,1952	1/1:7,12:19:33.08:517,33,0	1/1:4,24:28:69.24:1199,69,0	0/0:26,0:26:63:0,63,1529	0/0:20,0:20:54.19:0,54,1310	0/0:37,0:37:93.32:0,93,2287	0/0:25,0:25:63.22:0,63,1552	0/0:34,0:34:93.32:0,93,2276	0/0:29,0:29:63.21:0,63,1535	0/0:23,0:23:63.22:0,63,1534	1/1:5,38:43:87.30:1513,87,0	1/1:5,29:34:66.23:1147,66,0	0/0:18,0:18:36.12:0,36,847	0/0:17,0:17:48.16:0,48,1184	0/0:52,0:52:99:0,135,3257	0/0:19,0:19:48.15:0,48,1135	0/0:29,0:29:75.26:0,75,1728	0/0:45,0:45:99:0,111,2684	0/0:18,0:18:39.13:0,39,964	0/0:30,0:30:72.25:0,72,1752	0/0:21,0:21:51.15:0,51,1240	0/0:7,0:7:18.06:0,18,446
chr10	63238846	.	TC	T	18021.77	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=15.851;DP=727;FS=6.688;HRun=1;HaplotypeScore=139.7797;InbreedingCoeff=0.9993;MQ=90.43;MQ0=0;MQRankSum=-5.723;QD=36.48;ReadPosRankSum=3.611;VQSLOD=4.0520;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,159,2489	0/0:11,0:11:33.10:0,33,504	0/0:34,0:34:99:0,99,1499	0/0:30,0:30:84.36:0,84,1331	0/0:18,0:18:54.17:0,54,840	1/1:0,17:17:45.14:581,45,0	1/1:0,34:34:96.31:1269,96,0	0/0:17,0:17:51.17:0,51,794	1/1:1,20:21:55.02:684,55,0	1/1:0,24:24:69.16:865,69,0	1/1:0,21:21:60.19:785,60,0	1/1:0,25:25:69.23:909,69,0	1/1:0,22:22:60.16:773,60,0	1/1:0,30:30:90.29:1175,90,0	1/1:0,30:30:81.26:1069,81,0	1/1:0,26:26:78.26:1033,78,0	0/0:48,0:48:99:0,123,1962	0/0:22,0:22:51.14:0,51,788	1/1:1,15:16:45.60:571,46,0	1/1:0,18:18:54.07:667,54,0	1/1:3,56:59:99:2105,165,0	1/1:0,22:22:57.19:749,57,0	1/1:0,27:27:78.21:997,78,0	1/1:0,31:31:93.30:1226,93,0	1/1:0,25:25:66.22:867,66,0	1/1:1,21:22:66.21:851,66,0	1/1:0,15:15:45.10:575,45,0	1/1:0,9:9:21.07:272,21,0
chr10	63239127	.	C	CCA	26966.16	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=6.725;DP=752;FS=2.819;HRun=0;HaplotypeScore=142.6143;InbreedingCoeff=0.9986;MQ=79.54;MQ0=5;MQRankSum=-6.977;QD=42.40;ReadPosRankSum=3.630;VQSLOD=5.9184;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,153,2171	1/1:1,8:9:21.07:380,21,0	0/0:19,0:19:54.17:0,54,772	0/0:26,0:26:47.80:0,48,829	0/0:18,0:18:51.17:0,51,756	1/1:2,19:22:50.84:889,51,0	1/1:2,33:35:84.28:1537,84,0	1/1:4,29:33:87.22:1434,87,0	1/1:1,28:29:69.16:1225,69,0	1/1:0,17:19:50.99:790,51,0	1/1:4,17:21:48.16:860,48,0	1/1:2,30:31:73.13:1317,73,0	1/1:0,20:22:60.21:1097,60,0	1/1:5,22:28:63.21:1132,63,0	1/1:0,30:30:69.24:1261,69,0	1/1:2,18:20:54.18:970,54,0	1/1:0,19:20:45.09:786,45,0	1/1:0,29:29:69.24:1259,69,0	1/1:4,23:29:81.18:1353,81,0	1/1:0,17:17:45.08:769,45,0	1/1:5,50:55:99:2158,120,0	1/1:1,29:30:72.25:1303,72,0	1/1:0,32:33:75.35:1371,75,0	1/1:1,41:43:99:1860,105,0	1/1:2,18:20:42.14:760,42,0	1/1:5,20:26:66.21:1143,66,0	1/1:2,15:17:45.15:818,45,0	1/1:0,13:13:27.09:494,27,0
chr10	63240820	.	GTC	G	1259.41	PASS	AB=0.956;AC=9;AF=0.161;AN=56;BaseQRankSum=4.748;DP=1033;FS=5.206;HRun=0;HaplotypeScore=192.3654;InbreedingCoeff=-0.1097;MQ=48.19;MQ0=7;MQRankSum=-0.095;QD=3.99;ReadPosRankSum=-1.008;VQSLOD=2.3978;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:50,0:50:0.89:2,1,0	0/0:9,0:10:2.74:0,3,12	0/0:49,0:35:99:0,101,1542	0/0:74,0:39:82.65:0,83,1381	0/0:36,0:36:5.91:0,6,49	0/0:26,0:26:3.01:0,3,45	0/0:30,0:30:0.10:0,0,0	0/1:42,33:75:99:917,0,619	0/0:53,0:53:99:0,153,2594	0/1:42,0:42:99:157,0,469	0/0:28,0:28:3.01:0,3,49	0/0:37,0:37:5:0,5,78	0/0:39,0:39:13.42:0,13,84	0/0:43,0:43:2.62:0,3,48	0/0:40,0:40:3:0,3,25	0/0:45,0:46:3.37:0,3,49	0/1:26,0:26:37.89:38,0,169	0/1:25,0:25:19.14:19,0,74	0/1:23,0:20:78.37:78,0,254	0/0:30,0:30:0:0,0,0	0/1:36,0:36:1.06:1,0,86	0/0:30,0:30:3.01:0,3,49	0/0:30,0:30:2.99:0,3,24	0/0:37,1:38:2.99:0,3,24	0/0:35,0:35:5.36:0,5,32	0/1:39,0:39:99:162,0,426	0/0:37,0:37:11.97:0,12,166	0/0:6,0:6:6.31:0,6,24
chr10	63240822	.	C	CTCTGTGTGTG	17928.88	PASS	AB=0.534;AC=35;AF=0.648;AN=54;BaseQRankSum=-2.268;DP=1123;FS=0.000;HRun=0;HaplotypeScore=215.6037;InbreedingCoeff=0.5934;MQ=49.54;MQ0=6;MQRankSum=-5.332;QD=23.10;ReadPosRankSum=1.120;VQSLOD=3.4620;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:9,39:60:0.47:0,0,1	1/1:0,8:14:0.47:1,0,0	0/0:48,0:35:89.90:0,90,1768	0/0:69,0:36:63.62:0,64,1475	1/1:4,30:39:2.99:24,3,0	0/1:4,23:33:0:0,0,0	0/1:3,24:34:0:1,0,0	1/1:74,0:74:99:4071,180,0	0/0:55,0:55:99:0,156,3840	1/1:2,35:46:99:3572,111,0	0/1:3,22:29:0:0,0,0	1/1:4,33:39:15.05:666,15,0	1/1:5,30:46:18.01:809,18,0	0/1:7,34:43:0:0,0,0	./.	1/1:4,37:52:3.70:143,4,0	1/1:5,17:28:15.05:431,15,0	1/1:4,22:33:23.75:942,24,0	1/1:11,11:24:60.17:1709,60,0	0/1:3,26:30:0:0,0,0	1/1:7,27:43:3.01:94,3,0	0/0:6,23:32:0.03:0,0,0	0/1:4,25:33:0.17:0,0,0	0/1:8,29:44:0:0,0,0	0/0:5,30:38:0.47:0,0,1	1/1:5,31:43:99:3434,115,0	1/1:4,31:38:32.90:1566,33,0	1/1:0,4:8:9.03:464,9,0
chr10	63240826	.	GTCTA	G	1662.99	PASS	AB=0.985;AC=12;AF=0.231;AN=52;BaseQRankSum=5.693;DP=1058;FS=18.374;HRun=0;HaplotypeScore=195.1239;InbreedingCoeff=-0.0014;MQ=48.88;MQ0=6;MQRankSum=-7.821;QD=4.40;ReadPosRankSum=-0.713;VQSLOD=1.2957;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:0:0,0,0	0/0:13,0:13:2.99:0,3,24	0/0:53,0:38:99:0,108,2469	0/0:59,1:33:84.90:0,85,1616	0/0:37,0:37:8.98:0,9,72	0/0:33,0:33:6.02:0,6,122	0/0:30,0:30:3.43:0,3,24	0/1:63,10:73:99:521,0,1465	0/0:54,0:54:99:0,160,4030	0/1:42,0:42:99:366,0,1019	0/0:27,0:27:3:0,3,25	0/1:39,0:39:90.94:91,0,254	0/1:42,0:43:96.49:96,0,145	0/0:40,0:40:2.60:0,3,50	./.	1/1:46,0:46:1.59:68,2,0	0/0:24,0:24:16.59:0,17,218	0/1:32,0:32:26.32:26,0,75	0/1:26,0:23:99:121,0,582	0/0:31,0:31:12.03:0,12,172	0/0:37,0:37:3.01:0,3,63	0/0:33,0:33:8.99:0,9,137	0/1:29,0:29:0.11:0,0,0	./.	0/0:34,0:34:4.26:0,4,75	0/1:40,0:40:99:363,0,934	0/0:35,0:35:25.71:0,26,367	1/1:8,0:8:9.03:145,9,0
chr10	63242873	.	C	CT	682.82	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-5.220;DP=682;FS=0.000;HRun=2;HaplotypeScore=66.2085;InbreedingCoeff=0.9627;MQ=82.43;MQ0=0;MQRankSum=-0.477;QD=32.52;ReadPosRankSum=2.294;VQSLOD=3.6133;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,159,1911	0/0:8,0:8:24.08:0,24,297	0/0:18,0:18:45.11:0,45,534	0/0:25,0:25:54.17:0,54,716	0/0:20,0:20:57.18:0,57,706	0/0:23,0:23:69.22:0,69,855	0/0:18,0:18:54.14:0,54,644	0/0:31,0:31:84.25:0,84,1020	1/1:0,21:21:54.18:778,54,0	0/0:24,0:24:69.17:0,69,833	0/0:15,0:15:42.11:0,42,496	0/0:36,0:36:99:0,105,1261	0/0:27,0:27:66.20:0,66,814	0/0:23,0:23:66.21:0,66,813	0/0:31,0:31:93.28:0,93,1140	0/0:23,0:23:66.18:0,66,793	0/0:41,0:41:99:0,120,1473	0/0:19,0:19:57.18:0,57,707	0/0:25,0:25:72.23:0,72,890	0/0:10,0:10:24.07:0,24,297	0/0:51,0:51:99:0,153,1868	0/0:16,0:16:42.12:0,42,508	0/0:10,0:10:21.07:0,21,260	0/0:34,0:34:93.29:0,93,1152	0/0:22,0:22:60.17:0,60,730	0/0:24,0:24:72.23:0,72,892	0/0:28,0:28:75.23:0,75,927	0/0:4,0:4:12.04:0,12,149
chr10	63243132	.	AATAAAT	A	27404.84	PASS	AB=0.548;AC=49;AF=0.875;AN=56;BaseQRankSum=2.812;DP=609;FS=5.938;HRun=0;HaplotypeScore=181.1180;InbreedingCoeff=0.8203;MQ=49.84;MQ0=0;MQRankSum=-8.900;QD=49.20;ReadPosRankSum=1.774;VQSLOD=4.7124;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,40:42:99:2269,102,0	1/1:0,7:7:18.06:387,18,0	0/0:16,0:14:27.09:0,27,827	0/0:14,0:14:28.75:0,29,548	1/1:2,12:14:32.72:562,33,0	1/1:1,27:28:69.24:1541,69,0	1/1:3,15:18:39.09:824,39,0	1/1:3,30:33:81.25:1675,81,0	0/0:22,0:22:60.21:0,60,1980	1/1:0,27:27:81.22:1637,81,0	1/1:1,29:30:71.99:1349,72,0	1/1:2,28:30:81.28:1826,81,0	1/1:3,17:20:41.91:977,42,0	1/1:1,19:20:42.14:978,42,0	1/1:1,26:27:69.24:1573,69,0	0/1:4,19:23:51.80:1074,0,52	1/1:5,17:22:34.36:767,34,0	1/1:1,12:13:24.08:557,24,0	1/1:2,23:25:69.19:1339,69,0	1/1:1,20:21:54.11:1065,54,0	1/1:1,12:13:18.06:358,18,0	1/1:4,21:25:57.15:1217,57,0	1/1:4,19:23:45.07:914,45,0	1/1:1,13:14:11.91:176,12,0	1/1:2,23:25:54.18:1230,54,0	1/1:2,25:27:72.22:1499,72,0	1/1:1,20:21:51.18:1188,51,0	1/1:0,9:9:18.06:419,18,0
chr10	63243503	.	AG	A	2449.78	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=8.176;DP=705;FS=2.799;HRun=2;HaplotypeScore=74.4301;InbreedingCoeff=0.9998;MQ=89.51;MQ0=0;MQRankSum=-1.893;QD=32.66;ReadPosRankSum=0.811;VQSLOD=3.5782;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,105,1574	0/0:18,0:18:51.04:0,51,708	0/0:28,0:28:75.25:0,75,1114	0/0:32,0:32:86.75:0,87,1171	0/0:18,0:18:51.16:0,51,743	0/0:25,0:24:69.23:0,69,1034	0/0:27,0:27:81.26:0,81,1187	0/0:31,0:31:90.29:0,90,1310	0/0:20,0:20:60.19:0,60,879	0/0:25,0:25:72.24:0,72,1078	0/0:23,0:23:62.95:0,63,838	0/0:25,0:25:69.23:0,69,1031	1/1:0,15:15:45.15:584,45,0	0/0:29,0:29:87.26:0,87,1257	0/0:35,0:35:99:0,102,1528	0/0:32,0:32:96.30:0,96,1399	0/0:22,0:22:66.22:0,66,988	0/0:36,0:36:99:0,108,1568	0/0:25,0:25:72.22:0,72,1040	0/0:23,0:23:69.17:0,69,1006	0/0:45,0:45:99:0,135,2001	1/1:1,11:12:30.10:389,30,0	1/1:0,15:15:42.05:507,42,0	1/1:0,33:33:87.28:1130,87,0	0/0:16,0:16:48.16:0,48,715	0/0:26,0:26:78.26:0,78,1168	0/0:16,0:16:48.16:0,48,717	0/0:18,0:18:54.11:0,54,782
chr10	63243809	.	GA	G	420.75	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.244;DP=545;FS=0.000;HRun=6;HaplotypeScore=50.0374;InbreedingCoeff=0.8961;MQ=68.96;MQ0=0;MQRankSum=-1.581;QD=22.14;ReadPosRankSum=1.310;VQSLOD=2.6586;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,120,1577	0/0:10,0:10:30.10:0,30,393	0/0:10,0:10:23.55:0,24,271	0/0:4,0:4:5.68:0,6,50	0/0:31,0:31:81.26:0,81,1058	0/0:25,0:25:69.22:0,69,908	0/0:20,0:20:54.13:0,54,689	0/0:32,0:32:81.25:0,81,1036	1/1:3,16:19:48.12:516,48,0	0/0:24,0:24:63.20:0,63,826	0/0:17,0:17:48.11:0,48,598	0/0:14,0:14:36.12:0,36,474	0/0:11,0:11:33.11:0,33,434	0/0:14,0:14:39.10:0,39,476	0/0:19,0:19:57.17:0,57,736	0/0:20,0:20:57.18:0,57,737	0/0:28,0:28:81.26:0,81,1063	0/0:20,0:20:54.18:0,54,708	0/0:12,0:12:36.12:0,36,474	0/0:20,0:20:57.17:0,57,733	0/0:13,0:13:36.12:0,36,474	0/0:15,0:15:45.15:0,45,590	0/0:17,0:17:39.13:0,39,513	0/0:13,0:13:36.10:0,36,459	0/0:23,0:23:60.20:0,60,790	0/0:20,1:21:27.92:0,28,696	0/0:23,0:23:66.20:0,66,850	0/0:29,0:29:87.28:0,87,1144
chr10	63243895	.	G	GA	2412.24	PASS	AB=0.889;AC=13;AF=0.232;AN=56;BaseQRankSum=-8.942;DP=529;FS=0.000;HRun=9;HaplotypeScore=62.1517;InbreedingCoeff=0.8945;MQ=92.81;MQ0=0;MQRankSum=-1.351;QD=19.14;ReadPosRankSum=0.981;VQSLOD=3.7764;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,29:39:35.13:844,35,0	0/0:8,0:8:15:0,15,130	0/0:39,0:38:46.41:0,46,409	0/0:11,0:11:19.74:0,20,154	1/1:2,13:17:41.78:426,42,0	0/1:14,2:16:21.39:21,0,289	0/0:17,0:18:36.44:0,36,313	0/0:25,0:26:55.03:0,55,534	0/0:19,0:19:53.97:0,54,465	0/0:24,0:24:59.95:0,60,514	0/0:12,0:12:32.98:0,33,282	0/0:17,0:17:41.95:0,42,358	1/1:2,15:17:45.09:485,45,0	0/0:24,0:24:39.95:0,40,517	0/0:17,0:17:47.96:0,48,409	0/0:21,0:21:50.98:0,51,442	0/0:23,0:23:62.92:0,63,533	0/0:23,0:23:65.91:0,66,558	0/0:18,0:18:41.96:0,42,365	0/0:14,0:14:38.95:0,39,330	0/0:10,0:10:26.97:0,27,231	1/1:2,10:12:30.08:331,30,0	1/1:4,13:17:23.72:262,24,0	1/1:1,7:8:21.06:232,21,0	0/0:20,0:20:50.98:0,51,440	0/0:19,0:20:47.02:0,47,397	0/0:31,0:31:83.87:0,84,709	0/0:8,0:8:23.93:0,24,194
chr10	63244058	.	ACACG	A	18393.03	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-1.001;DP=698;FS=12.439;HRun=0;HaplotypeScore=135.4059;InbreedingCoeff=0.9926;MQ=71.95;MQ0=0;MQRankSum=-3.136;QD=29.38;ReadPosRankSum=4.056;VQSLOD=4.3196;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,26:39:66.23:1097,66,0	1/1:5,7:12:21.07:350,21,0	0/0:30,0:30:46.77:0,47,928	0/0:21,0:20:30.08:0,30,628	1/1:10,12:22:24.08:396,24,0	1/1:4,17:21:45.15:749,45,0	1/1:13,20:33:54.18:896,54,0	1/1:15,15:30:45.15:742,45,0	0/0:8,0:21:30.10:0,30,520	1/1:4,11:15:33.11:547,33,0	1/1:6,8:14:24.08:386,24,0	1/1:7,24:31:60.21:997,60,0	1/1:6,14:20:42.14:697,42,0	1/1:14,19:33:57.19:945,57,0	1/1:12,23:35:57.19:949,57,0	1/1:5,17:22:39.13:647,39,0	1/1:9,23:32:48.16:799,48,0	1/1:5,13:18:25.14:577,25,0	1/1:8,11:19:33.11:548,33,0	1/1:5,6:11:18.06:300,18,0	1/1:20,48:68:99:1848,111,0	1/1:6,12:18:36.12:595,36,0	1/1:0,10:10:27.09:447,27,0	1/1:15,19:34:48.16:800,48,0	1/1:7,20:27:48.16:794,48,0	1/1:6,17:23:51.12:788,51,0	1/1:6,20:26:57.19:949,57,0	1/1:2,11:13:33.11:548,33,0
chr10	63248121	.	G	GAA	13386.73	PASS	AB=0.632;AC=51;AF=0.911;AN=56;BaseQRankSum=-6.812;DP=473;FS=3.793;HRun=9;HaplotypeScore=60.5955;InbreedingCoeff=0.7550;MQ=83.55;MQ0=4;MQRankSum=-5.826;QD=32.65;ReadPosRankSum=2.617;VQSLOD=5.1891;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,2:31:72.13:736,72,0	1/1:3,5:10:21.07:300,21,0	0/0:31,0:21:30.72:0,31,272	0/0:31,0:27:17.25:0,17,181	1/1:1,0:12:30.02:301,30,0	1/1:1,10:12:29.59:424,30,0	1/1:0,21:23:57.15:844,57,0	1/1:2,14:17:45.10:627,45,0	0/1:5,0:12:11.45:39,0,11	1/1:0,12:12:36.11:517,36,0	1/1:2,11:13:33.11:508,33,0	1/1:1,12:14:35.48:499,35,0	1/1:3,7:12:26.06:340,26,0	1/1:0,13:14:35.61:517,36,0	1/1:2,13:16:36.12:554,36,0	1/1:1,11:12:15.05:231,15,0	1/1:4,37:44:99:1562,105,0	1/1:1,23:26:65.19:941,65,0	1/1:4,10:16:39:526,39,0	1/1:1,9:10:27.09:416,27,0	1/1:6,19:25:51.17:785,51,0	1/1:1,6:7:15.05:231,15,0	1/1:0,7:8:20.56:286,21,0	1/1:1,21:21:60.20:923,60,0	1/1:2,8:12:30.10:440,30,0	1/1:3,11:14:30.10:462,30,0	1/1:1,8:9:11.82:184,12,0	1/1:0,4:5:14.54:193,15,0
chr10	63250730	.	GT	G	2743.24	PASS	AB=0.964;AC=37;AF=0.661;AN=56;BaseQRankSum=-1.678;DP=472;FS=6.918;HRun=1;HaplotypeScore=98.8592;InbreedingCoeff=-0.2027;MQ=72.54;MQ0=8;MQRankSum=-4.843;QD=6.84;ReadPosRankSum=-2.440;VQSLOD=-0.3412;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,24:26:44.74:591,45,0	1/1:4,0:4:2.50:9,2,0	0/0:34,0:30:72.08:0,72,804	0/0:36,1:34:71.09:0,71,934	1/1:0,7:7:15.01:185,15,0	0/1:11,1:11:25.45:25,0,52	0/1:26,1:27:55.02:119,0,55	1/1:13,0:13:23.92:166,24,0	1/1:6,1:7:5.99:50,6,0	0/1:11,1:12:8.85:130,0,9	0/1:5,0:5:4.52:12,0,5	0/1:12,1:13:22.37:96,0,22	1/1:21,0:20:13.32:121,13,0	0/1:13,0:13:6.24:84,0,6	0/1:22,1:23:25.41:142,0,25	0/1:15,1:16:40.60:108,0,41	1/1:27,0:26:20.96:193,21,0	1/1:18,0:18:13.39:116,13,0	0/1:13,1:14:55.30:78,0,55	0/1:6,0:6:9.73:16,0,10	1/1:28,3:31:1.01:238,1,0	1/1:12,0:11:18.72:63,19,0	0/1:7,0:7:11.36:11,0,15	0/1:45,0:41:20.69:122,0,21	0/1:12,0:12:19.58:41,0,20	0/1:7,0:7:7.72:17,0,8	0/1:14,2:15:13.91:132,0,14	1/1:0,4:4:3.01:41,3,0
chr10	63250731	.	TG	T	2015.30	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=-4.266;DP=479;FS=11.541;HRun=8;HaplotypeScore=108.9716;InbreedingCoeff=0.6083;MQ=71.55;MQ0=8;MQRankSum=-0.317;QD=14.29;ReadPosRankSum=7.325;VQSLOD=2.0572;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:27:51.42:184,0,51	0/0:4,0:4:2.84:0,3,14	0/0:31,0:27:41.26:0,41,496	0/0:34,0:32:65.62:0,66,692	0/1:7,0:7:5.27:59,0,5	0/0:13,0:12:27.93:0,28,290	0/0:25,0:25:37.28:0,37,589	0/0:13,0:13:18.68:0,19,135	0/0:10,0:10:14.58:0,15,104	0/1:14,0:14:19.08:19,0,216	0/0:5,0:5:6.01:0,6,63	0/0:15,0:15:11.19:0,11,247	1/1:4,17:20:56.90:524,57,0	0/0:13,0:13:27.99:0,28,251	0/0:23,0:23:27.39:0,27,385	0/0:16,0:16:18.60:0,19,318	0/0:27,0:26:36.11:0,36,259	0/0:19,0:19:32.02:0,32,226	0/0:15,0:15:12.10:0,12,256	0/0:6,0:6:12.40:0,12,116	0/0:32,0:32:23.86:0,24,446	1/1:1,11:11:30.05:289,30,0	1/1:1,6:7:12.02:116,12,0	1/1:7,38:41:99:977,102,0	0/0:13,0:13:33.02:0,33,321	0/0:7,0:7:15.91:0,16,156	0/0:16,0:15:9.37:0,9,244	1/1:5,0:5:2.97:21,3,0
chr10	63251450	.	CATACACCCTCACTCAGTATACAGATA	C	28908.61	PASS	AB=0.667;AC=29;AF=0.518;AN=56;BaseQRankSum=12.470;DP=558;FS=0.366;HRun=0;HaplotypeScore=394.7797;InbreedingCoeff=0.9608;MQ=82.12;MQ0=0;MQRankSum=-15.441;QD=127.91;ReadPosRankSum=8.786;VQSLOD=3.3802;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,117,12615	0/0:10,0:10:30.10:0,30,2787	0/0:28,0:27:81.17:0,81,4977	0/0:16,0:16:45.10:0,45,2739	0/0:31,0:31:87.30:0,87,8131	1/1:5,15:20:36.12:2563,36,0	1/1:4,14:18:30.10:2135,30,0	0/0:41,0:41:99:0,123,9065	0/0:23,0:23:69.24:0,69,6748	1/1:1,13:14:39.13:2397,39,0	1/1:2,12:14:24.08:1708,24,0	1/1:5,16:21:36.12:2563,36,0	0/0:33,0:33:90.31:0,90,8834	1/1:4,13:17:33.11:2349,33,0	1/1:2,14:16:36.12:2562,36,0	1/1:2,14:16:36.12:2562,36,0	0/0:14,0:14:42.14:0,42,4476	0/0:29,0:29:87.28:0,87,8862	1/1:4,4:8:12.04:687,12,0	1/1:2,10:12:15.05:1067,15,0	0/1:6,6:12:0:0,0,0	0/0:24,0:24:66.23:0,66,7033	0/0:22,0:22:54.14:0,54,4830	0/0:22,0:22:48.16:0,48,4662	1/1:0,13:13:33.11:2349,33,0	1/1:8,19:27:54.17:3405,54,0	1/1:2,13:15:27.09:1922,27,0	1/1:0,3:3:9.03:641,9,0
chr10	63251495	.	G	GTAT	4369.31	PASS	AB=0.513;AC=7;AF=0.125;AN=56;BaseQRankSum=2.955;DP=584;FS=9.743;HRun=0;HaplotypeScore=241.3877;InbreedingCoeff=0.8231;MQ=75.44;MQ0=1;MQRankSum=1.689;QD=50.22;ReadPosRankSum=3.335;VQSLOD=4.0878;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,108,1983	0/0:9,0:9:27.09:0,27,503	0/0:20,0:20:57.17:0,57,1017	0/0:12,0:12:36.11:0,36,615	0/0:30,0:30:87.30:0,87,1603	0/0:24,0:24:63.20:0,63,1126	0/0:23,0:23:47.99:0,48,802	0/0:33,0:33:99:0,99,1831	0/0:21,0:21:63.22:0,63,1160	0/0:19,0:19:57.19:0,57,999	0/0:15,0:15:27.09:0,27,502	0/0:22,0:22:51.17:0,51,925	1/1:3,20:23:60.21:1396,60,0	0/0:20,0:20:45.15:0,45,800	0/0:27,0:27:62.88:0,63,1098	0/0:22,0:22:45.11:0,45,801	0/0:14,0:14:42.14:0,42,766	0/0:28,0:28:84.25:0,84,1501	0/0:12,0:12:33.11:0,33,599	0/0:15,0:15:27.04:0,27,503	0/0:15,0:15:9.03:0,9,157	1/1:2,26:29:63.22:1455,63,0	1/1:0,13:14:29.73:706,30,0	0/1:1,17:20:16.81:813,0,17	0/0:19,0:19:48.16:0,48,892	0/0:29,0:29:87.30:0,87,1609	0/0:24,0:24:57.20:0,57,1039	0/0:8,0:8:24.08:0,24,421
chr10	63252237	.	AATGCACAAACTGGAC	A	2615.04	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.564;DP=792;FS=15.514;HRun=0;HaplotypeScore=313.2281;InbreedingCoeff=0.9947;MQ=90.05;MQ0=0;MQRankSum=-7.525;QD=42.87;ReadPosRankSum=-2.210;VQSLOD=1.7311;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:10,31:41:54.18:1940,54,0	0/0:6,0:6:18.06:0,18,1290	0/0:31,0:31:83.71:0,84,5063	0/0:31,0:31:81.28:0,81,4465	1/1:3,17:20:23.75:796,24,0	0/0:24,0:24:69.24:0,69,4653	0/0:24,0:24:60.21:0,60,3861	0/0:39,0:39:99:0,114,6948	0/0:24,0:24:69.24:0,69,4759	0/0:25,0:25:75.26:0,75,5388	0/0:14,0:14:42.14:0,42,2945	0/0:37,0:37:99:0,105,7090	0/0:33,0:33:93.32:0,93,6545	0/0:35,0:35:99:0,102,7415	0/0:29,0:29:84.29:0,84,5812	0/0:27,0:27:81.28:0,81,5854	0/0:26,0:26:78.25:0,78,5203	0/0:38,0:38:99:0,111,7515	0/0:26,0:26:75.26:0,75,5096	0/0:20,0:20:60.21:0,60,4420	0/0:72,0:72:99:0,205,14389	0/0:32,0:32:93.32:0,93,6182	0/0:17,0:17:51.18:0,51,3356	0/0:24,0:24:63.22:0,63,4406	0/0:22,0:22:63.21:0,63,4449	0/0:29,0:29:87.28:0,87,5852	0/0:33,0:33:99:0,99,6681	0/0:13,0:13:39.11:0,39,2667
chr10	63254073	.	GCCAAGTACCCAAGTA	G	20262.60	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=16.754;DP=600;FS=4.207;HRun=0;HaplotypeScore=260.0579;InbreedingCoeff=0.9659;MQ=85.44;MQ0=0;MQRankSum=-15.182;QD=67.54;ReadPosRankSum=3.377;VQSLOD=4.4423;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:75.26:0,75,4672	0/0:9,0:9:27.08:0,27,1571	0/0:25,0:25:72.23:0,72,3896	0/0:24,0:24:66.98:0,67,3094	0/0:22,0:22:66.18:0,66,3989	1/1:2,16:18:33.11:1484,33,0	1/1:5,18:23:30.10:1291,30,0	0/0:31,0:31:84.29:0,84,5001	0/0:21,0:21:63.19:0,63,4017	1/1:6,18:25:51.17:2050,51,0	1/1:1,11:12:11.47:492,11,0	1/1:5,18:23:42.14:1726,42,0	0/0:25,0:25:72.25:0,72,4641	1/1:2,20:22:38.95:1752,39,0	1/1:2,32:34:57.20:2525,57,0	1/1:3,24:27:48.16:2128,48,0	0/0:31,0:31:93.28:0,93,6456	0/0:22,0:22:66.23:0,66,4512	1/1:4,12:16:33.07:848,33,0	1/1:2,18:20:30.06:1108,30,0	1/1:11,16:27:11.23:382,11,0	0/0:17,0:17:42.14:0,42,2788	0/0:17,0:17:48.15:0,48,3124	0/0:29,0:29:87.30:0,87,5692	1/1:3,11:14:30.10:1179,30,0	1/1:3,16:19:42.62:1666,43,0	1/1:3,16:18:35.98:1496,36,0	1/1:0,1:1:3.01:135,3,0
chr10	63255020	.	GAAAGAAAA	G	1999.18	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.082;DP=664;FS=11.006;HRun=0;HaplotypeScore=161.8700;InbreedingCoeff=0.9810;MQ=71.73;MQ0=3;MQRankSum=-7.505;QD=39.98;ReadPosRankSum=-0.335;VQSLOD=2.7191;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,28:29:48.11:1204,48,0	0/0:9,0:9:27.08:0,27,851	0/0:45,0:31:69.79:0,70,1866	0/0:48,0:29:11.29:0,11,988	1/1:1,20:21:44.91:917,45,0	0/0:21,0:21:54.18:0,54,2096	0/0:21,0:21:60.21:0,60,2199	0/0:26,0:26:63.21:0,63,2264	0/0:20,0:20:51.18:0,51,2010	0/0:27,0:27:78.26:0,78,2844	0/0:18,0:18:45.15:0,45,1657	0/0:18,0:18:51.15:0,51,1729	0/0:23,0:23:69.23:0,69,2562	0/0:21,0:21:57.18:0,57,2119	0/0:30,0:30:81.27:0,81,3098	0/0:25,0:25:72.24:0,72,2829	0/0:33,0:33:90.28:0,90,3358	0/0:28,0:28:63.17:0,63,2275	0/0:16,0:16:48.10:0,48,1632	0/0:21,0:21:51.17:0,51,1984	0/0:15,0:15:36.12:0,36,1385	0/0:19,0:19:54.17:0,54,2050	0/0:19,0:19:57.20:0,57,2302	0/0:26,0:26:78.16:0,78,2754	0/0:24,0:24:69.24:0,69,2885	0/0:18,0:18:54.19:0,54,2278	0/0:28,0:28:81.27:0,81,3057	0/0:13,0:13:39.13:0,39,1638
chr10	63256372	.	TGTGA	T	9016.45	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=14.130;DP=703;FS=0.328;HRun=0;HaplotypeScore=125.0792;InbreedingCoeff=0.9995;MQ=83.37;MQ0=1;MQRankSum=-7.569;QD=39.90;ReadPosRankSum=5.360;VQSLOD=5.0849;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,111,2877	1/1:0,10:10:24.08:454,24,0	0/0:28,0:28:76.99:0,77,1842	0/0:29,0:29:60.80:0,61,1709	0/0:16,0:16:48.16:0,48,1259	0/0:28,0:28:84.27:0,84,2151	0/0:40,0:40:99:0,111,2571	1/1:2,21:23:57.10:946,57,0	1/1:1,30:31:74.93:1418,75,0	0/0:26,0:26:75.25:0,75,1872	0/0:14,0:14:42.08:0,42,955	0/0:33,0:33:96.33:0,96,2585	1/1:1,21:21:48.16:909,48,0	0/0:25,0:25:75.26:0,75,1987	0/0:23,0:23:63.20:0,63,1586	0/0:23,0:23:69.24:0,69,1859	1/1:3,36:39:75.26:1422,75,0	1/1:1,29:30:72.25:1365,72,0	0/0:24,0:24:69.11:0,69,1513	0/0:13,0:13:39.13:0,39,1003	0/0:53,0:53:99:0,147,3801	1/1:1,16:17:27.09:490,27,0	1/1:2,20:22:41.86:761,42,0	1/1:1,31:31:66.49:1251,66,0	0/0:16,0:16:45.15:0,45,1214	0/0:17,0:17:48.16:0,48,1183	0/0:19,0:19:57.20:0,57,1537	0/0:12,0:12:36.12:0,36,966
chr10	63256747	.	CT	C	15886.95	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-0.871;DP=638;FS=2.365;HRun=5;HaplotypeScore=76.2149;InbreedingCoeff=0.9757;MQ=79.20;MQ0=0;MQRankSum=-5.843;QD=28.52;ReadPosRankSum=4.409;VQSLOD=5.2019;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,46:51:99:1423,126,0	1/1:1,4:5:8.96:86,9,0	0/0:28,0:27:34.10:0,34,578	0/0:28,0:25:41.18:0,41,489	1/1:1,15:16:27.07:305,27,0	1/1:0,22:22:54.15:611,54,0	1/1:2,26:28:72.21:815,72,0	1/1:3,29:32:87.15:918,87,0	0/0:24,0:24:72.19:0,72,906	1/1:1,21:22:63.16:697,63,0	1/1:0,11:11:30.09:339,30,0	1/1:2,28:30:63.18:710,63,0	1/1:2,19:21:54.15:610,54,0	1/1:1,20:21:57.16:645,57,0	1/1:3,19:22:54.10:596,54,0	1/1:0,22:22:60.17:678,60,0	1/1:2,25:27:72.21:813,72,0	1/1:2,20:22:57.16:645,57,0	1/1:0,25:25:75.14:805,75,0	1/1:1,13:14:36.10:407,36,0	1/1:1,30:31:84.24:950,84,0	1/1:2,17:19:44.64:507,45,0	1/1:2,16:18:44.95:509,45,0	1/1:1,33:34:78.22:882,78,0	1/1:1,12:13:33.09:373,33,0	1/1:1,23:24:66.07:682,66,0	1/1:1,20:21:60.17:677,60,0	1/1:0,6:6:18.05:203,18,0
chr10	63257053	.	T	TTAGAG	1662.26	PASS	AB=0.969;AC=23;AF=0.479;AN=48;BaseQRankSum=4.642;DP=516;FS=0.000;HRun=0;HaplotypeScore=163.9502;InbreedingCoeff=-0.5335;MQ=74.55;MQ0=15;MQRankSum=-6.146;QD=4.32;ReadPosRankSum=-7.522;VQSLOD=0.1140;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:32,0:30:2.23:2,0,90	./.	0/0:43,0:22:52.38:0,52,812	0/0:70,0:26:47.57:0,48,822	0/1:18,0:18:10.41:10,0,33	0/1:14,0:13:38.48:38,0,83	0/1:16,0:16:27.73:28,0,97	./.	0/1:22,0:25:56.55:172,0,57	0/1:21,0:21:46.34:340,0,46	0/1:13,0:13:28.75:29,0,66	0/1:25,0:25:35.12:253,0,35	1/1:4,1:19:2.77:62,3,0	0/1:29,0:29:99:233,0,99	0/1:12,0:11:47.31:47,0,51	1/1:6,0:21:11.15:87,11,0	./.	./.	0/1:18,0:17:6.63:7,0,114	0/1:11,0:11:31.51:96,0,32	0/1:19,0:19:50.81:117,0,51	0/1:9,0:9:41.69:42,0,54	0/1:8,0:8:3.21:34,0,3	0/1:5,0:27:5.85:51,0,6	0/0:15,0:17:10.04:0,10,183	0/1:22,0:22:81.50:81,0,174	0/1:14,0:14:32.75:33,0,83	0/1:9,0:9:41.91:42,0,60
chr10	63257093	.	A	AG	303.84	PASS	AB=0.731;AC=3;AF=0.063;AN=48;BaseQRankSum=4.253;DP=514;FS=0.000;HRun=1;HaplotypeScore=104.3338;InbreedingCoeff=-0.0674;MQ=63.23;MQ0=21;MQRankSum=0.218;QD=3.75;ReadPosRankSum=2.461;VQSLOD=0.1704;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:25,4:22:34.65:142,0,35	./.	0/0:25,0:15:39.05:0,39,477	0/0:37,0:21:47.55:0,48,556	0/1:8,10:12:30.41:30,0,45	0/0:15,0:14:21.54:0,22,268	0/0:16,0:16:26.35:0,26,298	./.	0/1:16,16:32:99:230,0,126	0/0:20,0:20:56.97:0,57,682	0/0:11,0:11:21.54:0,22,268	0/0:33,0:32:59.95:0,60,665	0/0:14,0:13:17.41:0,17,198	0/0:28,0:28:45.06:0,45,538	0/0:17,0:16:40.62:0,41,466	0/0:26,0:26:50.76:0,51,635	./.	./.	0/0:24,0:22:62.81:0,63,717	0/0:16,0:16:33.97:0,34,375	0/0:22,0:22:44.95:0,45,535	0/0:15,0:14:27.06:0,27,322	0/0:15,0:15:27.11:0,27,328	0/0:28,0:24:27.19:0,27,318	0/0:15,0:15:30.29:0,30,293	0/0:25,0:25:71.17:0,71,863	0/0:18,0:18:42.48:0,42,490	0/0:12,0:12:35.94:0,36,405
chr10	63257388	.	G	GCCC	6474.42	PASS	AC=44;AF=0.917;AN=48;BaseQRankSum=-1.615;DP=357;FS=29.920;HRun=8;HaplotypeScore=80.2415;InbreedingCoeff=0.7362;MQ=87.79;MQ0=0;MQRankSum=-7.093;QD=19.68;ReadPosRankSum=1.717;VQSLOD=1.0752;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:11,1:24:13.23:147,13,0	./.	0/0:13,0:13:30.07:0,30,379	0/0:14,0:15:25.87:0,26,347	1/1:6,0:6:9.01:98,9,0	1/1:2,14:16:21.07:360,21,0	1/1:6,20:33:51.07:820,51,0	./.	1/1:4,0:25:21.13:47,21,0	1/1:2,3:9:20.96:236,21,0	1/1:3,1:6:2.74:60,3,0	1/1:2,18:23:39.09:713,39,0	1/1:4,0:14:34.10:254,34,0	1/1:3,17:23:42.10:752,42,0	1/1:1,10:16:29.80:418,30,0	1/1:0,11:13:28.32:510,28,0	./.	./.	1/1:12,2:15:23.97:279,24,0	1/1:5,1:8:12.01:139,12,0	1/1:8,12:23:18.51:327,19,0	1/1:4,0:13:14.94:115,15,0	1/1:1,0:3:2.72:22,3,0	1/1:5,0:25:44.33:328,44,0	1/1:4,2:9:20.50:204,21,0	1/1:4,5:11:18.04:274,18,0	1/1:1,7:10:18.02:288,18,0	1/1:0,3:4:6:84,6,0
chr10	63260216	.	AGG	A	11531.41	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=17.919;DP=662;FS=1.386;HRun=2;HaplotypeScore=117.2897;InbreedingCoeff=0.9765;MQ=77.27;MQ0=0;MQRankSum=-2.849;QD=25.12;ReadPosRankSum=4.208;VQSLOD=3.9010;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,120,2293	1/1:0,10:10:30.10:459,30,0	0/0:16,0:15:45.02:0,45,770	0/0:14,0:14:4.14:0,4,488	0/0:28,0:28:84.27:0,84,1592	1/1:15,0:15:32.98:298,33,0	1/1:16,0:16:44.86:351,45,0	1/1:1,28:29:81.25:1195,81,0	0/0:25,0:25:75.12:0,75,1421	1/1:26,0:26:74.41:553,74,0	1/1:31,0:30:74.88:624,75,0	1/1:23,0:23:68.87:574,69,0	0/0:24,0:24:69.23:0,69,1349	1/1:14,0:14:32.93:264,33,0	1/1:41,0:41:99:935,117,0	1/1:25,0:25:41.89:487,42,0	1/1:0,30:30:75.25:1147,75,0	1/1:0,19:19:57.19:872,57,0	1/1:32,0:32:47.56:637,48,0	1/1:28,0:28:40.96:546,41,0	1/1:24,0:23:65.89:546,66,0	0/0:17,0:17:51.16:0,51,965	0/0:26,0:26:78.27:0,78,1523	0/0:13,0:13:39.12:0,39,732	1/1:42,0:41:99:925,114,0	1/1:24,0:24:68.01:503,68,0	1/1:19,0:19:50.91:415,51,0	1/1:11,0:11:23.97:200,24,0
chr10	63260217	.	GGA	G	19785.85	PASS	AB=1.000;AC=39;AF=0.696;AN=56;BaseQRankSum=14.846;DP=653;FS=1.404;HRun=0;HaplotypeScore=87.5793;InbreedingCoeff=0.9386;MQ=78.82;MQ0=0;MQRankSum=-4.104;QD=42.46;ReadPosRankSum=3.308;VQSLOD=6.7601;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,117,2335	1/1:10,0:10:30.10:459,30,0	0/0:16,0:16:48.13:0,48,841	0/1:15,0:15:4.26:4,0,457	0/0:28,0:28:81.28:0,81,1636	1/1:0,15:15:33.11:537,33,0	1/1:0,16:16:45.15:734,45,0	1/1:28,0:28:81.25:1195,81,0	0/0:26,0:26:78.27:0,78,1529	1/1:0,26:26:75.26:1219,75,0	1/1:0,31:30:75.26:1219,75,0	1/1:0,23:23:69.24:1125,69,0	0/0:24,0:24:69.24:0,69,1394	1/1:0,14:14:33.11:538,33,0	1/1:0,40:40:99:1909,117,0	1/1:0,24:24:63.22:1028,63,0	1/1:30,0:30:75.25:1147,75,0	1/1:19,0:19:57.19:872,57,0	1/1:0,30:30:90.31:1467,90,0	1/1:0,27:27:63.22:1025,63,0	1/1:0,24:24:66.23:1076,66,0	0/0:16,0:16:48.16:0,48,970	0/0:26,0:26:78.27:0,78,1571	0/0:12,0:12:36.12:0,36,732	1/1:0,40:40:99:1859,114,0	1/1:0,24:24:72.23:1148,72,0	1/1:0,19:19:51.17:832,51,0	1/1:0,11:11:24.08:391,24,0
chr10	63261697	.	AG	A	9398.57	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=12.649;DP=596;FS=8.401;HRun=8;HaplotypeScore=127.2878;InbreedingCoeff=0.9537;MQ=74.53;MQ0=1;MQRankSum=-5.508;QD=23.91;ReadPosRankSum=3.729;VQSLOD=3.6958;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,1:36:67.22:0,67,1052	0/0:2,0:6:5.75:0,6,29	0/0:27,0:27:47.13:0,47,563	0/0:21,0:20:22.44:0,22,496	0/0:22,0:22:60.12:0,60,694	1/1:1,18:19:51.07:491,51,0	1/1:1,23:23:59.95:565,60,0	0/0:9,0:27:36.41:0,36,254	0/0:2,0:20:46.13:0,46,246	1/1:4,20:24:53.93:508,54,0	1/1:1,17:19:51.07:491,51,0	1/1:4,17:21:54.03:511,54,0	1/1:4,16:20:48.08:463,48,0	1/1:3,21:24:63.42:595,63,0	1/1:1,30:31:87.14:839,87,0	1/1:4,18:20:51.03:491,51,0	0/0:3,0:30:80.74:0,81,442	0/0:1,0:13:28.75:0,29,146	1/1:2,12:16:41.94:386,42,0	1/1:1,18:19:54.09:520,54,0	1/1:2,22:24:60.07:579,60,0	1/1:4,10:15:30.01:289,30,0	1/1:3,17:20:48.06:463,48,0	1/1:1,20:21:54.09:521,54,0	1/1:2,8:9:18.01:174,18,0	1/1:4,18:22:56.61:530,57,0	1/1:4,34:38:99:953,99,0	1/1:2,1:4:3:29,3,0
chr10	63262693	.	T	TG	14113.68	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-1.503;DP=550;FS=26.129;HRun=6;HaplotypeScore=80.0334;InbreedingCoeff=0.9604;MQ=82.99;MQ0=0;MQRankSum=-5.419;QD=28.23;ReadPosRankSum=3.361;VQSLOD=3.1517;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,25:24:72.16:885,72,0	1/1:1,10:11:30.05:360,30,0	0/0:17,0:17:39.05:0,39,381	0/0:16,0:16:23.92:0,24,278	1/1:5,11:16:29.99:340,30,0	1/1:3,13:16:36.12:453,36,0	1/1:4,23:27:53.89:667,54,0	1/1:1,14:16:42.13:527,42,0	0/0:17,0:17:51.09:0,51,507	1/1:4,19:23:57.16:702,57,0	1/1:2,12:13:27.09:339,27,0	1/1:3,26:29:63.20:792,63,0	1/1:1,13:14:36.12:453,36,0	1/1:2,13:15:36.12:453,36,0	1/1:2,20:22:48.15:604,48,0	1/1:1,18:19:44.87:546,45,0	1/1:5,24:29:60.19:755,60,0	1/1:3,37:40:99:1265,102,0	1/1:6,18:24:54.01:609,54,0	1/1:0,12:12:33.05:396,33,0	1/1:4,32:36:60.12:1064,60,0	1/1:3,15:19:41.94:485,42,0	1/1:2,9:12:21.03:264,21,0	1/1:5,18:23:48.15:604,48,0	1/1:3,14:17:33.11:415,33,0	1/1:4,10:14:33.05:380,33,0	1/1:1,22:23:54.02:679,54,0	1/1:1,3:4:6.02:75,6,0
chr10	63262782	.	GAA	G	4628.64	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-3.048;DP=421;FS=3.422;HRun=3;HaplotypeScore=59.6856;InbreedingCoeff=0.9628;MQ=80.76;MQ0=15;MQRankSum=-1.970;QD=19.78;ReadPosRankSum=0.414;VQSLOD=2.4599;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:34:89.77:0,90,755	1/1:3,1:4:8.99:74,9,0	0/0:39,0:24:28.64:0,29,387	0/0:37,0:16:16.76:0,17,190	0/0:11,0:11:26.96:0,27,229	1/1:12,0:11:23.96:197,24,0	1/1:12,0:12:35.95:299,36,0	1/1:14,0:13:35.96:313,36,0	0/0:12,0:12:33.01:0,33,294	1/1:10,0:10:27.03:252,27,0	1/1:7,1:7:14.98:124,15,0	1/1:18,1:19:47.91:389,48,0	0/0:5,0:5:14.95:0,15,154	1/1:7,0:7:17.97:147,18,0	1/1:17,0:17:35.88:286,36,0	1/1:14,1:15:30.44:250,30,0	1/1:17,1:18:41.80:325,42,0	1/1:16,0:16:28.56:317,29,0	1/1:15,0:15:45:399,45,0	1/1:4,1:5:8.99:75,9,0	1/1:16,1:17:35.88:287,36,0	0/0:16,0:16:39.12:0,39,333	0/0:10,0:10:20.81:0,21,193	0/0:22,0:22:31.90:0,32,469	1/1:15,1:16:35.96:299,36,0	1/1:12,0:12:32.75:297,33,0	1/1:13,0:11:29.42:226,29,0	1/1:4,0:3:8.98:72,9,0
chr10	63265007	.	G	GA	6044.04	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=18.130;DP=707;FS=0.338;HRun=1;HaplotypeScore=135.4871;InbreedingCoeff=0.9992;MQ=74.56;MQ0=0;MQRankSum=-18.074;QD=32.15;ReadPosRankSum=-1.681;VQSLOD=4.1331;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:49,0:49:99:1380,102,0	0/0:13,0:13:39.13:0,39,503	0/0:14,0:14:36.08:0,36,424	0/0:23,0:23:65.91:0,66,815	1/1:25,0:25:45.06:595,45,0	0/0:20,0:20:54.18:0,54,701	0/0:27,0:27:75.24:0,75,973	0/0:29,0:29:87.25:0,87,1091	1/1:21,0:21:57.19:826,57,0	0/0:34,0:34:99:0,99,1248	0/0:8,0:8:24.08:0,24,311	0/0:42,0:42:99:0,126,1598	1/1:32,3:35:96.29:1384,96,0	0/0:38,0:38:99:0,114,1479	0/0:25,0:25:75.23:0,75,957	0/0:28,0:28:84.26:0,84,1077	0/0:35,0:35:99:0,99,1268	0/0:29,0:29:84.16:0,84,1035	0/0:15,0:15:42.14:0,42,545	0/0:22,0:22:57.18:0,57,739	0/0:45,0:45:99:0,132,1685	1/1:22,0:22:57.14:776,57,0	1/1:16,0:16:42.06:575,42,0	1/1:18,2:20:36.05:509,36,0	0/0:16,0:16:48.16:0,48,622	0/0:24,0:24:72.23:0,72,934	0/0:24,0:23:72.22:0,72,919	0/0:8,0:8:24.08:0,24,311
chr10	63265008	.	A	AAC	4995.86	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=17.713;DP=688;FS=0.000;HRun=0;HaplotypeScore=139.5739;InbreedingCoeff=0.9992;MQ=75.50;MQ0=0;MQRankSum=-16.736;QD=29.92;ReadPosRankSum=-0.823;VQSLOD=6.1027;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,37:44:95.38:1138,95,0	0/0:13,0:13:39.13:0,39,628	0/0:13,0:13:36.10:0,36,537	0/0:24,0:24:66.69:0,67,1031	1/1:3,18:21:43.38:525,43,0	0/0:20,0:20:54.18:0,54,881	0/0:25,0:25:75.26:0,75,1224	0/0:29,0:29:87.28:0,87,1373	1/1:2,17:19:56.15:684,56,0	0/0:34,0:34:99:0,99,1592	0/0:8,0:8:24.08:0,24,391	0/0:43,0:43:99:0,126,2050	1/1:3,27:30:84.14:1078,84,0	0/0:38,0:38:99:0,114,1860	0/0:25,0:25:75.26:0,75,1213	0/0:28,0:28:84.29:0,84,1366	0/0:35,0:35:99:0,105,1660	0/0:28,0:28:84.24:0,84,1335	0/0:15,0:15:42.14:0,42,685	0/0:22,0:22:66.20:0,66,1017	0/0:46,0:46:99:0,132,2153	1/1:2,20:22:57.12:683,57,0	1/1:0,13:13:39.08:478,39,0	1/1:2,16:18:32.94:410,33,0	0/0:16,0:16:48.16:0,48,770	0/0:26,0:26:72.25:0,72,1175	0/0:25,0:24:72.25:0,72,1167	0/0:8,0:8:24.08:0,24,391
chr10	63265010	.	AG	A	2427.20	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=17.606;DP=697;FS=0.351;HRun=1;HaplotypeScore=136.8791;InbreedingCoeff=0.9989;MQ=76.46;MQ0=0;MQRankSum=-16.665;QD=14.28;ReadPosRankSum=-0.466;VQSLOD=2.8705;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,37:44:77.15:497,77,0	0/0:13,0:13:32.96:0,33,570	0/0:13,0:13:30.07:0,30,452	0/0:26,0:26:72.19:0,72,1057	1/1:3,18:21:42.87:278,43,0	0/0:20,0:20:57.19:0,57,911	0/0:27,0:27:81.24:0,81,1245	0/0:28,0:28:84.27:0,84,1319	1/1:3,17:20:59.27:418,59,0	0/0:34,0:34:96.33:0,96,1534	0/0:8,0:8:24.08:0,24,384	0/0:44,0:44:99:0,132,2105	1/1:4,27:31:80.48:611,80,0	0/0:38,0:38:99:0,114,1776	0/0:25,0:25:72.23:0,72,1128	0/0:28,0:28:84.29:0,84,1337	0/0:35,0:35:99:0,105,1653	0/0:27,0:27:81.28:0,81,1295	0/0:16,0:16:45.15:0,45,718	0/0:22,0:22:66.23:0,66,1053	0/0:49,0:49:99:0,147,2300	1/1:3,20:23:58.21:387,58,0	1/1:0,13:13:35.54:231,36,0	1/1:2,16:18:27.75:204,28,0	0/0:16,0:16:48.15:0,48,740	0/0:26,0:26:78.26:0,78,1226	0/0:24,0:23:72.25:0,72,1148	0/0:8,0:8:24.08:0,24,384
chr10	63265697	.	C	CG	12051.57	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-18.246;DP=707;FS=3.948;HRun=5;HaplotypeScore=90.1163;InbreedingCoeff=0.9951;MQ=77.88;MQ0=0;MQRankSum=-2.404;QD=32.93;ReadPosRankSum=1.559;VQSLOD=5.2181;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,129,1367	0/0:14,0:14:33.08:0,33,354	0/0:19,0:19:35.76:0,36,433	0/0:15,0:15:27.06:0,27,290	0/0:24,0:24:63.15:0,63,674	1/1:3,18:21:48.16:631,48,0	1/1:1,28:29:78.25:1026,78,0	0/0:24,0:24:51.12:0,51,548	0/0:23,0:23:63.16:0,63,676	1/1:3,19:22:60.19:786,60,0	1/1:2,11:13:26.81:352,27,0	1/1:1,28:29:78.25:1026,78,0	0/0:25,0:25:66.15:0,66,709	1/1:1,29:30:84.27:1105,84,0	1/1:1,31:32:90.29:1184,90,0	1/1:1,25:26:46.03:955,46,0	0/0:40,0:40:99:0,108,1150	0/0:38,0:38:99:0,108,1159	1/1:6,7:13:24.04:296,24,0	1/1:2,16:18:48.16:629,48,0	1/1:8,55:63:99:1863,115,0	0/0:23,0:23:51.13:0,51,548	0/0:18,0:18:45.11:0,45,483	0/0:29,0:29:81.16:0,81,857	1/1:1,23:24:66.21:865,66,0	1/1:7,18:25:54.17:702,54,0	1/1:3,13:16:36.12:473,36,0	1/1:0,5:5:12.04:158,12,0
chr10	63267578	.	GTATA	G	5010.63	PASS	AB=1.000;AC=42;AF=0.808;AN=52;BaseQRankSum=-4.407;DP=230;FS=0.000;HRun=0;HaplotypeScore=49.1562;InbreedingCoeff=0.5227;MQ=72.03;MQ0=1;MQRankSum=-3.534;QD=23.97;ReadPosRankSum=3.741;VQSLOD=3.8523;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:8,0:8:0:0,0,0	1/1:0,3:3:6.02:103,6,0	0/0:7,0:7:5.42:0,5,26	0/0:8,0:4:1.36:0,1,4	0/1:7,0:7:0:0,0,0	1/1:2,11:13:15.05:245,15,0	1/1:4,0:4:6.02:103,6,0	1/1:12,26:38:78.20:1168,78,0	1/1:2,0:2:2.97:20,3,0	1/1:2,4:6:12.04:199,12,0	1/1:1,5:6:12.04:193,12,0	1/1:2,3:5:3.01:51,3,0	0/0:3,0:3:3.45:0,3,22	1/1:4,5:9:12.04:206,12,0	1/1:1,8:9:18.06:309,18,0	1/1:0,5:5:12.04:195,12,0	1/1:3,14:17:33.11:540,33,0	1/1:7,10:18:27.08:439,27,0	1/1:1,9:10:27.06:403,27,0	1/1:0,6:6:6.02:103,6,0	1/1:0,1:1:3.01:51,3,0	./.	0/0:2,0:2:2.88:0,3,15	./.	1/1:4,11:15:12.04:194,12,0	1/1:10,0:10:20.96:193,21,0	1/1:1,4:5:9.03:154,9,0	1/1:12,0:12:15.02:141,15,0
chr10	63267589	.	TATATA	T	1499.70	PASS	AB=1.000;AC=34;AF=0.630;AN=54;BaseQRankSum=4.017;DP=223;FS=24.950;HRun=0;HaplotypeScore=62.5831;InbreedingCoeff=-0.0506;MQ=78.64;MQ0=0;MQRankSum=-2.861;QD=7.98;ReadPosRankSum=8.206;VQSLOD=-0.1110;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:1.16:0,1,8	0/1:4,0:4:9.20:9,0,19	0/0:7,0:7:9.54:0,10,84	0/0:9,0:6:3.94:0,4,49	0/0:8,0:8:8.21:0,8,36	1/1:11,0:11:12.96:57,13,0	0/1:4,0:4:6.19:6,0,44	0/1:36,0:36:99:101,0,252	1/1:2,0:2:2.37:8,2,0	1/1:4,0:4:9.80:45,10,0	0/1:9,0:9:58.85:59,0,74	0/1:4,0:4:3.09:3,0,22	0/1:3,0:3:7.10:7,0,16	1/1:5,0:5:9.98:34,10,0	1/1:8,0:8:14.97:52,15,0	0/1:6,0:6:13.78:35,0,14	1/1:15,0:15:2.61:74,3,0	0/1:13,0:13:14.09:78,0,14	0/1:11,0:11:28.30:28,0,48	0/1:8,0:8:6.17:6,0,44	1/1:1,0:1:2.50:9,2,0	./.	1/1:3,0:3:2.60:10,3,0	1/1:1,0:1:3.01:34,3,0	0/1:12,0:12:29.03:35,0,29	1/1:0,13:13:36.09:601,36,0	0/1:4,0:4:15.26:15,0,17	1/1:0,11:11:15.05:349,15,0
chr10	63267594	.	A	AT	333.64	PASS	AB=1.000;AC=19;AF=0.352;AN=54;BaseQRankSum=1.439;DP=235;FS=7.319;HRun=8;HaplotypeScore=58.6680;InbreedingCoeff=0.5550;MQ=82.76;MQ0=0;MQRankSum=-0.634;QD=3.97;ReadPosRankSum=-1.842;VQSLOD=-0.6304;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,7:9:3.48:36,3,0	0/0:4,0:4:8.75:0,9,58	0/1:9,0:9:5.85:6,0,52	0/1:12,0:8:0.91:1,0,29	1/1:0,9:9:9.03:104,9,0	0/0:11,0:11:11.50:0,11,61	0/0:5,0:5:14.74:0,15,107	0/0:36,0:36:88:0,88,606	1/1:2,0:2:3:29,3,0	0/0:6,0:6:14.71:0,15,103	0/1:9,0:9:13.37:13,0,107	0/0:4,0:4:5.88:0,6,42	1/1:0,3:3:3.01:34,3,0	0/0:5,0:5:11.50:0,12,61	0/0:8,0:8:17.25:0,17,91	0/0:7,0:7:14.62:0,15,100	0/0:15,0:15:28.87:0,29,164	0/0:13,0:13:28.90:0,29,163	0/0:11,0:11:29.28:0,29,194	0/0:9,0:9:11.74:0,12,85	0/0:1,0:1:2.88:0,3,15	./.	1/1:0,4:4:3.01:35,3,0	1/1:1,0:1:3.01:34,3,0	0/0:12,0:12:11.62:0,12,73	1/1:15,0:15:22.37:181,22,0	0/0:4,0:4:11.63:0,12,73	1/1:11,0:11:9.02:28,9,0
chr10	63270274	.	GA	G	3003.68	PASS	AB=0.722;AC=44;AF=0.786;AN=56;BaseQRankSum=1.722;DP=490;FS=13.382;HRun=14;HaplotypeScore=67.5684;InbreedingCoeff=0.0251;MQ=53.63;MQ0=10;MQRankSum=-0.309;QD=6.40;ReadPosRankSum=4.367;VQSLOD=0.9717;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:27,11:40:12.11:197,0,12	1/1:5,7:14:18.90:115,19,0	0/0:13,0:4:2.50:0,2,9	0/0:7,0:3:6.43:0,6,24	0/1:14,2:15:38.87:48,0,39	1/1:7,10:18:12.39:117,12,0	1/1:6,10:18:3.01:148,3,0	1/1:9,8:16:20.58:138,21,0	1/1:10,5:15:17.66:122,18,0	0/1:8,10:17:5.17:105,0,5	1/1:5,3:8:2.88:20,3,0	0/1:9,7:17:8.22:89,0,8	1/1:4,5:9:17.02:110,17,0	1/1:12,15:28:28.55:191,29,0	0/1:17,3:19:50.80:59,0,51	1/1:14,4:18:3.36:104,3,0	1/1:10,16:25:24.22:279,24,0	1/1:10,13:24:31.27:200,31,0	1/1:6,7:11:17.69:118,18,0	1/1:10,2:12:14.10:84,14,0	0/1:8,13:23:12.14:124,0,12	1/1:5,11:18:24.64:151,25,0	1/1:9,9:17:11.65:76,12,0	1/1:6,17:25:14.84:230,15,0	0/1:9,5:14:7.06:85,0,7	1/1:4,7:12:22.78:150,23,0	1/1:9,5:15:10.50:59,10,0	0/1:3,6:8:18.91:32,0,19
chr10	63270365	.	T	TAC	5297.27	PASS	AB=0.805;AC=31;AF=0.574;AN=54;BaseQRankSum=-6.118;DP=739;FS=3.900;HRun=0;HaplotypeScore=118.7845;InbreedingCoeff=0.2777;MQ=54.68;MQ0=23;MQRankSum=-0.891;QD=10.51;ReadPosRankSum=-2.395;VQSLOD=4.1298;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:38:31.20:0,31,153	1/1:5,0:5:5.97:46,6,0	./.	0/0:60,0:20:0.47:0,0,1	0/0:7,0:15:13.27:0,13,62	1/1:11,4:15:23.99:291,24,0	0/1:20,13:33:27.15:454,0,27	1/1:33,0:33:33.58:249,34,0	0/0:7,0:19:22.26:0,22,106	0/1:19,3:21:18.33:164,0,18	0/1:10,4:15:35.48:79,0,35	0/1:13,8:22:99:181,0,103	0/0:20,0:23:35.40:0,35,311	0/1:17,4:22:20.42:284,0,20	0/1:15,11:26:3.28:378,0,3	1/1:18,14:33:18.66:440,19,0	1/1:26,0:31:17.36:116,17,0	1/1:14,0:15:5.75:53,6,0	0/1:11,5:16:12.53:213,0,13	1/1:10,10:19:18.06:272,18,0	0/1:61,13:71:99:902,0,104	0/0:19,0:19:27.05:0,27,290	0/0:11,0:12:8.85:0,9,81	0/1:31,0:35:3.85:4,0,494	1/1:23,6:30:6.79:358,7,0	1/1:26,2:28:18.02:196,18,0	1/1:9,6:15:32.91:387,33,0	1/1:9,2:13:21:231,21,0
chr10	63272466	.	G	GCC	7757.13	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-13.731;DP=655;FS=0.724;HRun=1;HaplotypeScore=73.9506;InbreedingCoeff=0.9785;MQ=98.03;MQ0=0;MQRankSum=-5.981;QD=49.73;ReadPosRankSum=4.258;VQSLOD=4.8725;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,35:36:87.30:1674,87,0	0/0:14,0:14:42.13:0,42,621	0/0:38,0:38:99:0,102,1450	0/0:31,0:31:90.27:0,90,1315	1/1:0,24:24:63.11:1173,63,0	0/0:17,0:17:48.13:0,48,691	0/0:15,0:15:45.14:0,45,668	0/0:22,0:22:66.20:0,66,956	1/1:1,15:17:48.12:880,48,0	0/0:28,0:28:84.29:0,84,1286	0/0:20,0:20:57.18:0,57,848	0/0:29,0:29:87.30:0,87,1327	1/1:2,23:25:66.23:1251,66,0	0/0:16,0:16:48.15:0,48,710	0/0:20,0:20:60.19:0,60,897	0/0:27,0:27:78.24:0,78,1152	0/0:32,0:32:90.28:0,90,1350	0/0:22,1:23:5.36:0,5,837	0/0:25,0:25:72.22:0,72,1061	0/0:28,0:28:81.25:0,81,1217	0/0:34,0:34:96.29:0,96,1425	1/1:0,22:22:60.21:1159,60,0	1/1:0,11:11:26.69:520,27,0	1/1:1,20:21:57.20:1101,57,0	0/0:19,0:19:57.17:0,57,830	0/0:24,0:24:72.24:0,72,1102	0/0:25,0:24:72.22:0,72,1060	0/0:12,0:12:36.12:0,36,542
chr10	63273468	.	TGGG	T	2138.04	PASS	AB=0.900;AC=9;AF=0.167;AN=54;BaseQRankSum=6.508;DP=329;FS=31.973;HRun=17;HaplotypeScore=56.1344;InbreedingCoeff=0.5485;MQ=73.02;MQ0=3;MQRankSum=0.392;QD=19.44;ReadPosRankSum=8.328;VQSLOD=-0.1112;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:10:6:0,6,59	1/1:2,7:9:17.94:185,18,0	0/0:27,0:14:9.16:0,9,121	0/0:14,0:9:12.48:0,12,123	0/0:4,0:6:2.80:0,3,41	0/0:8,0:8:0:0,0,0	0/0:8,0:9:5.04:0,5,44	1/1:8,14:22:40.64:430,41,0	0/0:10,0:10:8.98:0,9,110	0/0:11,0:11:3.01:0,3,39	./.	0/0:20,0:19:12.91:0,13,158	0/1:8,0:9:0:0,0,0	0/0:13,0:13:12:0,12,170	0/0:9,0:9:8.72:0,9,142	0/0:8,0:8:9.03:0,9,140	1/1:9,28:37:74.07:770,74,0	1/1:4,29:33:87.05:895,87,0	0/0:6,0:6:2.99:0,3,23	0/0:6,0:6:3.01:0,3,52	0/0:13,0:13:6.02:0,6,104	0/0:6,0:6:0:0,0,0	0/0:2,0:3:0:0,0,0	0/0:6,0:6:0:0,0,0	0/0:7,0:7:6:0,6,89	0/0:12,0:12:9.03:0,9,128	0/0:6,0:6:2.70:0,3,51	0/0:6,0:6:6.02:0,6,103
chr10	63274100	.	C	CT	3538.80	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-12.042;DP=695;FS=0.000;HRun=2;HaplotypeScore=75.6643;InbreedingCoeff=0.9836;MQ=89.04;MQ0=0;MQRankSum=-0.607;QD=38.89;ReadPosRankSum=0.626;VQSLOD=3.9789;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,138,1695	1/1:0,10:10:27.09:388,27,0	0/0:30,0:30:78.21:0,78,934	0/0:21,0:21:57.15:0,57,679	0/0:27,0:27:72.22:0,72,880	0/0:25,0:25:69.20:0,69,839	0/0:26,0:26:72.20:0,72,865	1/1:1,18:19:54.18:777,54,0	0/0:21,0:21:63.19:0,63,768	0/0:30,0:30:90.28:0,90,1116	0/0:17,0:17:45.12:0,45,544	0/0:26,0:26:78.23:0,78,953	0/0:20,0:20:60.19:0,60,743	0/0:15,0:15:45.14:0,45,557	0/0:27,0:27:81.23:0,81,979	0/0:31,0:31:93.28:0,93,1139	1/1:1,33:34:91.19:1294,91,0	1/1:1,27:28:75.25:1079,75,0	0/0:13,0:13:33.10:0,33,397	0/0:29,0:29:87.26:0,87,1065	0/0:37,0:37:99:0,108,1313	0/0:25,0:25:66.21:0,66,818	0/0:29,0:29:81.24:0,81,989	0/0:36,0:36:99:0,108,1327	0/0:19,0:19:51.15:0,51,621	0/0:26,0:26:72.23:0,72,892	0/0:21,0:21:60.15:0,60,714	0/0:5,0:5:9.03:0,9,112
chr10	63276108	.	GTTCT	G	1943.72	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=9.098;DP=667;FS=2.759;HRun=0;HaplotypeScore=109.4972;InbreedingCoeff=0.9953;MQ=73.69;MQ0=0;MQRankSum=-3.030;QD=26.63;ReadPosRankSum=-1.508;VQSLOD=3.4711;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:78.01:0,78,1911	1/1:0,8:8:18:276,18,0	0/0:25,0:24:41.92:0,42,914	0/0:23,0:22:39.11:0,39,904	0/0:30,0:30:81.11:0,81,1921	0/0:33,0:33:90.26:0,90,2107	0/0:23,0:23:57.19:0,57,1416	1/1:10,20:30:57.16:906,57,0	0/0:20,0:20:51.17:0,51,1242	0/0:22,0:22:60.21:0,60,1487	0/0:21,0:21:51.18:0,51,1265	0/0:25,0:25:60.17:0,60,1374	0/0:26,0:26:72.25:0,72,1791	0/0:19,0:19:36.12:0,36,891	0/0:24,0:24:57.18:0,57,1310	0/0:26,0:26:72.25:0,72,1769	1/1:8,14:22:36.12:614,36,0	1/1:3,10:13:18.06:307,18,0	0/0:18,0:18:36.12:0,36,888	0/0:32,0:32:90.29:0,90,2083	0/0:30,0:30:72.25:0,72,1767	0/0:28,0:28:81.25:0,81,1882	0/0:20,0:20:51.17:0,51,1237	0/0:25,0:25:69.24:0,69,1695	0/0:29,0:29:84.29:0,84,2083	0/0:26,0:26:63.21:0,63,1470	0/0:26,0:24:72.25:0,72,1789	0/0:11,0:11:33.06:0,33,650
chr10	63276512	.	C	CGTGTGTGTGTGT	7921.20	PASS	AB=1.000;AC=43;AF=0.796;AN=54;BaseQRankSum=-6.943;DP=684;FS=17.984;HRun=0;HaplotypeScore=255.2789;InbreedingCoeff=0.2314;MQ=59.58;MQ0=15;MQRankSum=-1.257;QD=12.74;ReadPosRankSum=-1.073;VQSLOD=2.0337;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:41,0:43:23.82:439,24,0	0/1:11,0:11:8.20:8,0,432	0/1:34,0:18:0:0,0,0	0/1:21,0:14:3.06:3,0,23	1/1:10,0:10:3.01:70,3,0	1/1:28,0:29:24.55:597,25,0	1/1:37,0:36:30.77:620,31,0	0/0:18,0:17:18.04:0,18,275	1/1:23,0:24:21.46:588,21,0	1/1:32,0:30:42.08:882,42,0	1/1:14,0:14:8.94:218,9,0	1/1:22,0:22:24.08:521,24,0	1/1:18,0:18:27.09:626,27,0	1/1:22,0:23:23.86:507,24,0	1/1:17,0:18:5.57:142,6,0	./.	0/1:31,0:31:2.26:2,0,1747	0/1:25,0:25:38.71:39,0,786	1/1:26,0:26:22.71:500,23,0	1/1:25,0:24:8.79:73,9,0	1/1:49,0:50:41.87:899,42,0	1/1:19,0:19:12.03:257,12,0	1/1:16,0:14:2.91:75,3,0	0/0:10,9:28:0.29:0,0,1	1/1:17,9:32:6.91:352,7,0	0/1:23,0:22:99:105,0,151	1/1:15,0:15:12.03:348,12,0	0/1:19,0:18:49.72:50,0,139
chr10	63276539	.	G	GTCTGTC	2838.75	PASS	AB=0.949;AC=17;AF=0.304;AN=56;BaseQRankSum=-2.737;DP=667;FS=4.261;HRun=0;HaplotypeScore=197.8011;InbreedingCoeff=0.1309;MQ=47.50;MQ0=13;MQRankSum=-3.733;QD=9.28;ReadPosRankSum=3.855;VQSLOD=2.1979;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:39,0:38:20.49:20,0,275	0/1:10,0:10:74.29:97,0,74	0/0:15,0:7:7.90:0,8,94	0/0:15,0:9:14.85:0,15,232	0/0:11,0:11:20.98:0,21,241	0/0:24,0:24:28.58:0,29,309	0/0:40,0:39:42.20:0,42,666	1/1:26,0:23:10.45:416,10,0	0/1:22,0:21:99:140,0,283	0/0:31,0:29:43.73:0,44,638	0/1:10,0:10:33.47:33,0,90	0/1:29,0:27:8.69:9,0,347	0/1:22,0:22:35.69:36,0,379	0/0:29,0:29:7.90:0,8,454	0/0:26,0:26:36.54:0,37,420	1/1:1,0:24:2.42:11,2,0	0/1:37,0:37:99:334,0,221	0/1:23,0:23:97:303,0,97	0/0:16,0:16:33.71:0,34,296	0/0:21,0:20:21.24:0,21,238	0/0:47,0:47:9.90:0,10,659	0/0:22,0:22:2.11:0,2,267	0/0:17,0:15:21.20:0,21,285	0/0:29,0:28:18.02:0,18,255	1/1:20,0:20:3.86:41,4,0	1/1:5,14:23:43.04:915,43,0	0/0:18,0:18:18.03:0,18,439	0/1:3,12:18:8.13:651,0,8
chr10	63276541	.	GTC	G	1298.44	PASS	AB=0.982;AC=23;AF=0.411;AN=56;BaseQRankSum=-1.916;DP=663;FS=2.760;HRun=0;HaplotypeScore=160.6545;InbreedingCoeff=0.1679;MQ=48.50;MQ0=14;MQRankSum=2.881;QD=3.01;ReadPosRankSum=-4.259;VQSLOD=1.7143;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:38,1:38:23.78:273,24,0	0/0:10,0:10:27.48:0,27,363	0/0:16,1:8:17.70:0,18,121	0/0:15,0:9:11.18:0,11,137	1/1:11,1:12:19.85:151,20,0	0/1:24,0:24:7.83:8,0,114	0/1:38,2:39:26.01:26,0,329	0/0:24,0:21:52.81:0,53,419	1/1:23,0:22:1.57:206,2,0	0/1:30,1:29:57.03:57,0,249	0/1:10,0:10:15.13:15,0,55	0/1:29,0:27:0:0,0,199	0/1:23,0:23:19.50:208,0,19	0/1:27,1:28:46.07:46,0,236	0/0:25,2:27:15.57:0,16,253	0/0:23,0:23:1.93:0,2,23	0/0:36,0:36:75.26:0,75,1263	0/0:23,0:23:60:0,60,723	0/1:15,0:15:6.08:6,0,130	0/1:19,0:18:2.51:3,0,182	0/1:44,2:46:24.20:24,0,408	1/1:21,1:22:19.72:169,20,0	1/1:17,0:15:4.27:92,4,0	1/1:29,1:29:17.80:146,18,0	0/0:20,0:20:11.98:0,12,103	0/1:22,1:22:45.90:46,0,384	0/0:17,0:17:32.89:0,33,309	0/0:20,0:18:27.96:0,28,317
chr10	63276835	.	C	CT	2212.74	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-9.860;DP=698;FS=3.226;HRun=10;HaplotypeScore=81.7902;InbreedingCoeff=0.9368;MQ=76.30;MQ0=0;MQRankSum=-1.830;QD=22.35;ReadPosRankSum=-2.305;VQSLOD=3.5880;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:28.46:0,28,372	1/1:2,19:21:50.16:518,50,0	0/0:21,0:21:19.01:0,19,246	0/0:15,0:16:18.35:0,18,136	0/0:16,0:17:28.99:0,29,228	0/0:21,0:21:53.92:0,54,443	0/0:28,0:29:64.94:0,65,523	1/1:12,26:38:53.53:767,54,0	0/0:32,0:32:83:0,83,685	0/0:39,0:39:71.84:0,72,591	0/0:23,0:23:59.90:0,60,489	0/0:24,0:24:61.97:0,62,499	0/0:13,2:15:10.16:0,10,288	0/0:24,0:24:65.91:0,66,542	0/0:34,0:35:94.88:0,95,763	0/0:24,0:24:62.92:0,63,517	1/1:3,16:19:45.11:480,45,0	1/1:0,21:21:57.14:608,57,0	0/0:22,0:22:47.91:0,48,394	0/0:23,1:24:28.21:0,28,433	0/0:28,0:30:60.91:0,61,467	0/0:16,1:18:3.02:0,3,220	0/0:10,0:10:26.97:0,27,222	0/0:25,0:25:65.91:0,66,542	0/0:30,2:32:45.90:0,46,576	0/0:36,0:36:86.86:0,87,714	0/0:39,1:40:60.87:0,61,707	0/0:18,0:19:46.90:0,47,371
chr10	63277221	.	TCA	T	3550.70	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=10.807;DP=638;FS=0.000;HRun=0;HaplotypeScore=80.6613;InbreedingCoeff=0.9788;MQ=74.01;MQ0=0;MQRankSum=-2.352;QD=26.70;ReadPosRankSum=3.108;VQSLOD=4.4546;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,21:28:60.19:756,60,0	0/0:11,0:11:33.11:0,33,549	0/0:33,0:32:54.12:0,54,813	0/0:25,1:26:6.83:0,7,548	1/1:5,18:23:39.12:487,39,0	0/0:26,0:26:69.24:0,69,1124	0/0:26,0:26:54.18:0,54,879	0/0:27,0:27:16.40:0,16,804	1/1:3,20:23:54.17:681,54,0	0/0:21,0:21:51.17:0,51,846	0/0:14,0:14:42.13:0,42,667	0/0:21,1:22:22.34:0,22,904	1/1:0,13:13:30.10:378,30,0	0/0:26,2:27:37.39:0,37,1151	0/0:35,0:35:40.67:0,41,1195	0/0:25,0:25:66.23:0,66,1095	0/0:25,1:26:28.36:0,28,1009	0/0:12,0:12:27.56:0,28,449	0/0:23,0:23:51.17:0,51,825	0/0:29,1:30:40.40:0,40,1200	0/0:20,0:20:39.11:0,39,598	1/1:1,7:8:18.06:227,18,0	1/1:2,9:11:24.08:303,24,0	1/1:4,23:27:57.18:719,57,0	0/0:26,0:26:66.23:0,66,1095	0/0:22,0:22:57.17:0,57,888	0/0:36,1:37:55.44:0,55,1432	0/0:14,0:14:42.13:0,42,673
chr10	63277422	.	AAAG	A	1286.55	PASS	AB=0.950;AC=9;AF=0.161;AN=56;BaseQRankSum=3.282;DP=571;FS=15.798;HRun=0;HaplotypeScore=95.6701;InbreedingCoeff=0.0256;MQ=60.79;MQ0=15;MQRankSum=-3.020;QD=10.29;ReadPosRankSum=-2.876;VQSLOD=1.4733;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:26,1:27:99:335,0,107	0/0:10,0:10:5.92:0,6,257	0/0:41,0:15:13.19:0,13,290	0/0:37,0:17:10.85:0,11,273	0/1:21,0:21:73.41:308,0,73	0/0:18,0:18:54.17:0,54,1001	0/0:16,0:16:47.63:0,48,799	0/0:34,0:30:46.27:0,46,650	0/1:13,1:14:33.52:164,0,34	0/0:31,0:31:72.45:0,72,1426	0/0:28,0:28:78.09:0,78,1376	0/0:22,0:22:60.04:0,60,994	0/1:15,0:15:73.95:136,0,74	0/0:16,0:15:24.07:0,24,445	0/0:25,0:25:69.14:0,69,1239	0/0:16,0:16:39.07:0,39,731	0/0:18,0:18:5.67:0,6,397	0/1:17,0:14:34.59:35,0,463	0/0:20,0:20:60.12:0,60,954	0/0:23,0:22:57.17:0,57,1041	0/0:4,0:4:9.03:0,9,192	1/1:13,0:13:6.16:272,6,0	0/1:6,3:7:9.47:43,0,9	0/1:9,0:9:18.49:134,0,18	0/0:19,0:19:45.13:0,45,824	0/0:24,0:22:56.85:0,57,1085	0/0:34,0:33:87.05:0,87,1506	0/0:10,0:10:24.08:0,24,513
chr10	63277425	.	G	GA	1543.65	PASS	AB=0.972;AC=16;AF=0.286;AN=56;BaseQRankSum=8.665;DP=572;FS=8.017;HRun=8;HaplotypeScore=82.4522;InbreedingCoeff=0.8157;MQ=64.78;MQ0=14;MQRankSum=-6.534;QD=11.43;ReadPosRankSum=-0.450;VQSLOD=2.2846;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,17:25:43.41:438,43,0	0/1:11,0:11:2.50:3,0,45	0/0:42,0:17:22.72:0,23,189	0/0:36,0:18:5.35:0,5,170	1/1:11,10:21:32.54:274,33,0	0/0:19,0:19:53.70:0,54,455	0/0:17,0:17:44.62:0,45,394	0/0:33,0:29:28.26:0,28,164	1/1:9,5:14:26.82:248,27,0	0/0:32,0:32:74.98:0,75,675	0/0:28,0:28:69.01:0,69,626	0/0:20,0:20:53.82:0,54,471	1/1:6,9:15:23.82:230,24,0	0/0:15,0:14:24.01:0,24,219	0/0:28,0:28:72:0,72,646	0/0:15,0:15:38.90:0,39,349	0/1:16,1:17:6.16:6,0,108	0/0:17,0:14:18.87:0,19,92	0/0:23,0:23:28.65:0,29,456	0/0:23,0:22:47.94:0,48,429	0/0:4,0:4:9:0,9,82	1/1:2,11:13:33.05:354,33,0	1/1:6,2:6:5.94:61,6,0	1/1:4,7:11:12.96:122,13,0	0/0:18,0:18:41.35:0,41,356	0/0:23,0:21:51.02:0,51,467	0/0:34,0:33:71.94:0,72,658	0/0:10,0:10:24.01:0,24,220
chr10	63277923	.	GTATGCAGCCCACAGACTCTGAGTACCGTC	G	1040.14	PASS	AB=0.588;AC=13;AF=0.232;AN=56;BaseQRankSum=5.724;DP=624;FS=6.259;HRun=0;HaplotypeScore=427.1190;InbreedingCoeff=0.9369;MQ=68.99;MQ0=2;MQRankSum=-1.428;QD=9.91;ReadPosRankSum=0.177;VQSLOD=0.6184;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:31,0:31:35.30:335,35,0	0/0:9,0:9:18.02:0,18,475	0/0:33,0:24:20.56:0,21,385	0/0:26,0:23:31.71:0,32,370	1/1:3,14:17:21.06:251,21,0	0/0:18,0:18:44.99:0,45,1308	0/0:26,0:26:54.11:0,54,2117	0/0:34,0:34:48.03:0,48,1033	1/1:10,0:10:11.89:113,12,0	0/0:16,0:16:36.07:0,36,1528	0/0:12,0:12:18.05:0,18,737	0/0:36,0:36:87.20:0,87,3449	1/1:11,0:11:18.01:202,18,0	0/0:32,0:32:63.11:0,63,2384	0/0:17,0:17:30.06:0,30,1109	0/0:21,0:21:51.03:0,51,1837	0/0:23,0:23:57.18:0,57,2358	0/0:44,0:44:75.24:0,75,3314	0/0:26,0:26:35.92:0,36,901	0/0:14,0:14:27:0,27,725	0/0:54,0:53:99:0,102,4031	1/1:10,0:10:7.98:91,8,0	0/1:3,7:10:0:0,0,0	1/1:16,0:15:17.36:227,17,0	0/0:18,0:18:42.08:0,42,1374	0/0:25,0:25:48.03:0,48,1755	0/0:15,0:15:38.89:0,39,1255	0/0:20,0:20:42.02:0,42,1321
chr10	63278530	.	CAA	C	6588.01	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=17.263;DP=747;FS=2.748;HRun=6;HaplotypeScore=98.1203;InbreedingCoeff=0.9989;MQ=78.50;MQ0=0;MQRankSum=-2.781;QD=36.00;ReadPosRankSum=3.883;VQSLOD=4.3933;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,49:49:99:1801,135,0	0/0:13,0:13:39.13:0,39,694	0/0:12,0:12:36.10:0,36,592	0/0:24,0:24:63.16:0,63,1052	1/1:2,20:22:54.18:721,54,0	0/0:29,0:29:87.24:0,87,1532	0/0:47,0:47:99:0,141,2468	0/0:27,0:27:66.22:0,66,1152	1/1:0,26:26:78.26:1040,78,0	0/0:23,0:23:63.21:0,63,1095	0/0:12,0:12:33.11:0,33,590	0/0:42,0:42:99:0,126,2259	1/1:0,24:24:60.20:800,60,0	0/0:32,0:32:87.30:0,87,1550	0/0:19,0:19:54.19:0,54,973	0/0:32,1:33:53.28:0,53,1543	0/0:32,0:32:93.32:0,93,1670	0/0:28,0:28:84.29:0,84,1504	0/0:25,0:25:72.23:0,72,1264	0/0:14,0:14:39.12:0,39,666	0/0:66,0:66:99:0,193,3426	1/1:1,25:26:69.22:920,69,0	1/1:1,10:11:30.10:400,30,0	1/1:1,24:25:21.20:906,21,0	0/0:26,0:26:75.24:0,75,1302	0/0:29,0:29:75.26:0,75,1348	0/0:22,0:22:66.23:0,66,1184	0/0:9,0:9:27.09:0,27,473
chr10	63278661	.	G	GCT	2356.70	PASS	AB=1.000;AC=32;AF=0.593;AN=54;BaseQRankSum=8.915;DP=585;FS=18.508;HRun=0;HaplotypeScore=89.4048;InbreedingCoeff=-0.0113;MQ=80.60;MQ0=8;MQRankSum=-3.055;QD=5.47;ReadPosRankSum=1.899;VQSLOD=1.6762;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,20:23:3.01:55,3,0	1/1:9,0:9:3.01:38,3,0	0/0:40,0:30:18.67:0,19,484	0/0:39,0:28:50.63:0,51,636	./.	0/1:14,0:13:21.77:22,0,141	0/1:23,0:23:99:115,0,202	1/1:25,0:25:64.13:604,64,0	1/1:25,0:25:3.01:40,3,0	0/1:10,0:10:14.63:15,0,161	0/1:9,0:9:45.36:45,0,98	0/0:22,0:22:8.54:0,9,363	1/1:16,0:16:35.49:243,35,0	0/0:23,0:23:18.23:0,18,389	0/1:21,0:21:88.62:89,0,235	0/1:20,0:20:99:122,0,290	1/1:20,0:20:6.02:75,6,0	1/1:10,0:10:23.72:163,24,0	0/1:21,0:21:20.91:21,0,305	0/1:12,0:12:28.67:29,0,203	0/1:57,0:57:25.74:26,0,725	1/1:16,0:16:23.71:197,24,0	1/1:8,0:8:11.98:99,12,0	1/1:18,2:20:24.03:251,24,0	0/1:24,0:22:58.73:59,0,305	0/0:16,0:16:21.64:0,22,308	0/1:22,0:22:68.61:69,0,247	0/1:25,0:23:99:160,0,212
chr10	63278662	.	C	CTG	3757.66	PASS	AB=0.766;AC=39;AF=0.722;AN=54;BaseQRankSum=-0.408;DP=668;FS=11.967;HRun=0;HaplotypeScore=122.7124;InbreedingCoeff=-0.2654;MQ=75.15;MQ0=9;MQRankSum=-0.717;QD=6.38;ReadPosRankSum=-1.110;VQSLOD=2.5968;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:25:3.01:30,3,0	1/1:1,0:10:5.04:32,5,0	./.	0/0:39,0:28:3.01:0,3,33	1/1:6,0:16:5.04:32,5,0	0/1:11,2:16:21.12:105,0,21	0/1:12,11:24:4.26:337,0,4	1/1:27,0:27:23.64:191,24,0	1/1:5,0:31:3:28,3,0	0/1:8,2:11:23.64:82,0,24	0/1:5,4:11:21.02:121,0,21	0/1:16,7:24:54.16:78,0,54	1/1:25,0:23:13.82:120,14,0	0/1:19,5:24:54.27:71,0,54	0/1:13,10:25:9.09:292,0,9	0/1:12,8:23:99:283,0,99	1/1:2,1:25:6:52,6,0	1/1:13,0:13:7.24:54,7,0	1/1:22,4:26:18.03:247,18,0	0/1:9,3:12:51.28:120,0,51	0/1:53,6:60:44.53:329,0,45	0/1:19,0:19:0:0,0,0	1/1:13,0:12:2.70:16,3,0	1/1:29,0:28:16.48:149,16,0	1/1:16,8:24:3.91:212,4,0	1/1:18,3:21:8.69:88,9,0	0/1:17,4:23:12.09:249,0,12	0/1:14,10:24:27.21:438,0,27
chr10	63279430	.	C	CAAAAA	4252.26	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=7.725;DP=612;FS=0.488;HRun=8;HaplotypeScore=125.3016;InbreedingCoeff=0.9306;MQ=56.15;MQ0=19;MQRankSum=-10.263;QD=25.62;ReadPosRankSum=-6.488;VQSLOD=0.4966;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:7,15:28:36.07:800,36,0	0/0:11,0:10:27.52:0,28,431	0/1:17,0:3:0:0,0,0	0/0:22,0:6:1.60:0,2,75	1/1:12,9:24:35.97:607,36,0	0/0:23,0:23:54.13:0,54,883	0/0:23,0:23:45.99:0,46,889	0/0:26,0:25:53.90:0,54,721	1/1:8,0:17:24.01:500,24,0	0/0:32,0:32:65.78:0,66,940	0/0:17,0:17:39.05:0,39,605	0/0:19,0:19:39:0,39,584	1/1:8,7:15:27.04:662,27,0	0/0:24,0:25:62.52:0,63,868	0/0:19,0:19:45.05:0,45,691	0/0:25,0:25:63.09:0,63,876	0/0:24,0:26:65.91:0,66,926	0/0:22,0:22:60.11:0,60,911	0/0:18,0:16:33.01:0,33,503	0/0:29,0:29:59.96:0,60,888	0/0:12,0:13:23.99:0,24,336	1/1:16,9:28:23.94:504,24,0	1/1:7,7:15:27.05:619,27,0	1/1:5,12:17:24.51:560,25,0	0/0:17,0:17:38.98:0,39,522	0/0:37,0:36:81.12:0,81,1204	0/0:28,0:28:65.98:0,66,931	0/0:12,0:12:26.98:0,27,430
chr10	63279647	.	C	CAAAG	5519.64	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=1.580;DP=577;FS=3.410;HRun=0;HaplotypeScore=109.4114;InbreedingCoeff=0.9810;MQ=77.23;MQ0=0;MQRankSum=-9.934;QD=44.51;ReadPosRankSum=-1.513;VQSLOD=5.1622;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:12,7:19:30.10:734,30,0	0/0:7,0:7:18.04:0,18,283	0/0:14,0:14:7.61:0,8,344	0/0:17,0:17:30.06:0,30,511	1/1:12,7:19:30.10:687,30,0	0/0:21,0:21:57.20:0,57,985	0/0:35,0:35:81.25:0,81,1356	0/0:29,0:29:72.25:0,72,1240	1/1:6,7:13:27.07:580,27,0	0/0:22,0:22:57.19:0,57,961	0/0:14,0:14:33.11:0,33,570	0/0:21,0:21:54.16:0,54,904	1/1:7,7:14:33.11:804,33,0	0/0:16,0:16:36.12:0,36,618	0/0:28,0:28:78.27:0,78,1344	0/0:17,0:17:48.16:0,48,830	0/0:18,0:18:48.15:0,48,803	0/0:26,0:26:69.21:0,69,1144	0/0:30,0:30:66.23:0,66,1135	0/0:22,0:22:51.17:0,51,878	0/0:35,0:35:90.31:0,90,1554	1/1:8,15:23:45.15:1056,45,0	1/1:5,15:19:42.14:939,42,0	1/1:6,10:16:30.10:719,30,0	0/0:15,0:15:33.11:0,33,570	0/0:29,0:29:63.22:0,63,1085	0/0:30,0:30:69.24:0,69,1187	0/0:6,0:6:15.05:0,15,253
chr10	63279690	.	A	AG	2526.73	PASS	AB=0.938;AC=15;AF=0.268;AN=56;BaseQRankSum=3.960;DP=496;FS=21.178;HRun=6;HaplotypeScore=94.6109;InbreedingCoeff=0.9145;MQ=67.77;MQ0=1;MQRankSum=-7.217;QD=23.84;ReadPosRankSum=0.945;VQSLOD=2.0930;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,19:20:54.17:679,54,0	0/0:5,0:5:12.03:0,12,122	0/0:31,0:29:52.07:0,52,613	0/0:20,0:15:14.01:0,14,234	1/1:0,13:13:36.03:429,36,0	0/0:14,0:14:36.08:0,36,367	0/0:22,0:22:48.06:0,48,469	0/0:28,0:28:71.92:0,72,701	1/1:0,7:7:21.07:264,21,0	0/0:26,0:26:69.14:0,69,698	0/1:14,1:15:4.67:5,0,273	0/0:21,0:21:54.12:0,54,550	1/1:2,10:12:30.10:377,30,0	0/0:5,0:5:12.02:0,12,117	0/0:34,0:34:87.20:0,87,887	0/0:20,0:20:54.11:0,54,545	0/0:14,0:14:36.08:0,36,367	0/0:20,0:20:51.11:0,51,520	0/0:20,0:20:54.12:0,54,551	0/0:13,0:13:30.05:0,30,306	0/0:26,0:26:69.10:0,69,686	1/1:2,10:12:30.09:368,30,0	1/1:7,7:13:18.06:226,18,0	1/1:2,11:13:30.10:377,30,0	0/0:12,0:12:33.07:0,33,336	0/0:28,0:28:75.16:0,75,764	0/0:23,0:23:60.13:0,60,611	0/0:8,0:8:24.05:0,24,245
chr10	63279741	.	ACC	A	4855.84	PASS	AB=1.000;AC=37;AF=0.661;AN=56;BaseQRankSum=-3.891;DP=377;FS=43.508;HRun=12;HaplotypeScore=86.2618;InbreedingCoeff=0.8364;MQ=79.41;MQ0=0;MQRankSum=0.454;QD=17.59;ReadPosRankSum=7.243;VQSLOD=0.3564;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:12:9.43:0,9,92	1/1:2,5:7:11.99:111,12,0	0/0:17,0:15:18.88:0,19,151	0/0:16,0:15:8.60:0,9,91	0/0:10,0:10:8.75:0,9,81	0/0:5,0:12:19.90:0,20,85	1/1:7,14:22:44.80:436,45,0	1/1:10,3:16:11.65:103,12,0	0/0:5,0:5:12.03:0,12,136	1/1:10,9:20:38.70:365,39,0	1/1:2,9:12:18.08:218,18,0	1/1:11,7:20:32.50:297,32,0	0/0:10,0:10:14.96:0,15,153	1/1:4,1:5:6:61,6,0	1/1:14,16:31:56.81:559,57,0	1/1:7,7:14:36.02:352,36,0	1/1:1,15:18:29.47:339,29,0	1/1:4,10:14:36.06:360,36,0	1/1:6,8:14:30.01:302,30,0	1/1:6,8:15:26.77:254,27,0	1/1:6,3:9:15:152,15,0	0/0:5,0:5:7.25:0,7,72	0/1:6,0:6:24.40:24,0,38	0/0:13,0:14:24.58:0,25,264	1/1:6,1:7:12.62:104,13,0	1/1:8,7:17:26.25:234,26,0	1/1:7,8:17:32.52:297,33,0	1/1:3,8:12:29.79:286,30,0
chr10	63281919	.	TCCATC	T	89.03	PASS	AB=0.831;AC=9;AF=0.161;AN=56;BaseQRankSum=3.668;DP=417;FS=15.841;HRun=0;HaplotypeScore=92.3327;InbreedingCoeff=0.1474;MQ=37.29;MQ0=0;MQRankSum=-2.965;QD=0.93;ReadPosRankSum=2.920;VQSLOD=0.6905;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:18,2:20:30.70:0,31,617	0/0:3,0:3:3.01:0,3,67	0/0:10,0:8:17.98:0,18,449	0/0:17,0:11:0.79:0,1,574	0/0:24,1:25:5.52:0,6,152	0/0:6,4:10:6.85:0,7,45	0/1:8,4:12:0.92:1,0,1	0/0:16,1:16:48.16:0,48,1227	0/0:22,7:29:33.05:0,33,737	0/1:13,2:15:52.12:52,0,661	1/1:4,0:4:1.47:3,1,0	0/0:8,6:14:3.62:0,4,52	0/1:19,11:30:13.47:13,0,424	0/0:8,11:19:8.95:0,9,166	0/0:8,11:19:8.42:0,8,93	0/0:8,10:18:12.04:0,12,215	0/0:7,0:7:9.03:0,9,147	0/0:7,0:7:12.04:0,12,320	0/0:7,0:7:21.07:0,21,557	0/0:13,0:13:0.56:0,1,7	0/1:15,1:16:0:0,0,0	0/0:23,1:24:12.81:0,13,439	0/0:26,0:26:15.78:0,16,455	0/0:22,0:22:22.03:0,22,407	1/1:2,0:2:1.08:2,1,0	0/1:14,3:17:99:117,0,641	0/0:6,6:12:14.65:0,15,334	0/0:2,0:2:1.24:0,1,86
chr10	63281929	.	G	GGT	86.88	PASS	AB=0.987;AC=9;AF=0.161;AN=56;BaseQRankSum=9.157;DP=773;FS=58.773;HRun=0;HaplotypeScore=391.8871;InbreedingCoeff=-0.0485;MQ=35.41;MQ0=11;MQRankSum=-3.307;QD=0.34;ReadPosRankSum=1.519;VQSLOD=0.2889;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:14.67:0,15,456	0/0:6,0:6:0.73:0,1,98	0/0:25,0:14:29.08:0,29,422	0/0:29,0:20:56.76:0,57,824	0/0:33,1:34:10.43:0,10,156	1/1:21,0:21:0.91:3,1,0	0/0:16,0:16:4.79:0,5,89	0/0:29,0:27:72.80:0,73,1032	0/0:39,0:39:50.28:0,50,809	0/1:50,2:51:71.49:71,0,970	0/1:28,0:28:4.79:14,0,5	0/1:32,1:33:8.27:8,0,162	0/0:40,0:40:18.79:0,19,371	0/0:29,0:29:8.46:0,8,134	0/1:28,0:28:6.79:7,0,58	0/0:28,0:28:7.43:0,7,150	0/0:11,0:11:6.49:0,6,85	0/0:10,0:10:15.04:0,15,244	0/0:14,0:12:35.80:0,36,495	0/1:30,0:30:9.76:10,0,11	0/0:22,0:22:6.47:0,6,39	0/0:43,1:44:3.28:0,3,267	0/0:52,0:52:6.57:0,7,547	0/0:30,0:30:11.97:0,12,284	0/1:23,0:23:5.27:5,0,38	0/1:37,1:38:86.05:86,0,726	0/0:24,0:24:18.93:0,19,261	0/0:8,0:8:4.23:0,4,54
chr10	63281939	.	C	CCA	2339.58	PASS	AB=0.995;AC=20;AF=0.357;AN=56;BaseQRankSum=4.762;DP=803;FS=1.593;HRun=0;HaplotypeScore=332.9488;InbreedingCoeff=0.0277;MQ=35.73;MQ0=15;MQRankSum=-3.936;QD=5.32;ReadPosRankSum=-1.522;VQSLOD=2.0247;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:17.97:0,18,555	0/0:7,0:6:11.51:0,12,123	0/0:32,0:18:42.09:0,42,605	0/0:32,0:23:57.46:0,57,884	0/0:32,0:32:12.76:0,13,223	1/1:20,0:20:13.25:204,13,0	0/1:18,0:18:81.44:130,0,81	0/0:43,0:40:99:0,117,1847	0/0:44,0:44:72.74:0,73,1027	0/1:53,0:52:99:353,0,449	0/1:29,0:29:3.58:42,0,4	0/1:32,0:32:80.65:81,0,111	0/0:43,0:43:14.40:0,14,453	0/1:28,1:29:99:139,0,135	0/1:28,0:28:28.36:164,0,28	0/1:29,1:30:73.19:359,0,73	0/0:11,0:11:6.02:0,6,98	0/0:10,0:10:24.08:0,24,379	0/1:12,0:9:33.89:34,0,196	1/1:26,0:26:5.73:224,6,0	1/1:17,7:26:0.15:53,0,0	0/1:40,0:40:53.82:54,0,314	0/0:48,0:48:37.64:0,38,527	0/0:29,0:29:27.83:0,28,486	1/1:29,0:29:23.60:388,24,0	0/1:36,0:36:99:151,0,448	0/1:25,0:25:54.54:55,0,125	0/1:7,0:7:4.44:83,0,4
chr10	63281957	.	TC	T	203.16	PASS	AB=0.856;AC=14;AF=0.250;AN=56;BaseQRankSum=15.769;DP=851;FS=218.320;HRun=2;HaplotypeScore=362.8567;InbreedingCoeff=-0.2762;MQ=40.22;MQ0=22;MQRankSum=-13.160;QD=0.51;ReadPosRankSum=0.810;VQSLOD=-0.6328;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,2:34:58.63:0,59,1117	0/0:9,2:10:10.72:0,11,133	0/0:47,0:24:61.38:0,61,847	0/0:43,0:34:99:0,102,1387	0/1:32,3:35:59.14:59,0,330	0/0:16,2:18:23.49:0,23,454	0/0:14,0:14:23.73:0,24,334	0/0:54,0:51:99:0,151,2248	0/0:38,0:38:95.12:0,95,1260	0/1:40,12:54:34.97:35,0,1216	0/1:18,10:31:37.82:38,0,209	0/1:24,6:30:4.06:4,0,368	0/0:33,3:36:31.96:0,32,896	0/1:21,3:24:48.16:48,0,358	0/1:26,2:28:24.69:25,0,426	0/0:29,4:33:38.42:0,38,829	0/0:15,0:15:35.82:0,36,475	0/1:11,1:12:2.48:2,0,449	0/1:10,0:6:0.75:1,0,196	0/1:28,6:35:53.09:53,0,415	0/0:30,0:31:33.26:0,33,421	0/1:36,8:45:13.06:13,0,538	0/0:33,12:45:20.88:0,21,607	0/0:30,2:32:52.88:0,53,754	0/1:20,7:29:17.25:17,0,247	0/1:30,7:38:43.59:44,0,886	0/1:18,2:20:3.39:3,0,285	0/1:6,2:8:0.13:0,0,163
chr10	63282784	.	GACAAA	G	4377.13	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=13.330;DP=555;FS=2.798;HRun=0;HaplotypeScore=125.1865;InbreedingCoeff=0.9946;MQ=87.89;MQ0=0;MQRankSum=-13.473;QD=46.57;ReadPosRankSum=2.853;VQSLOD=5.3419;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,17:17:39.13:843,39,0	0/0:14,0:14:42.13:0,42,1252	0/0:18,0:18:48.09:0,48,1182	0/0:28,0:28:78.03:0,78,2049	1/1:1,10:12:16.86:460,17,0	0/0:17,0:17:48.16:0,48,1522	0/0:20,0:20:57.20:0,57,1671	0/0:33,0:32:93.31:0,93,2674	1/1:1,16:17:45.15:973,45,0	0/0:15,0:15:42.14:0,42,1254	0/0:15,0:15:45.15:0,45,1336	0/0:22,0:22:66.23:0,66,2076	1/1:0,13:13:30.10:648,30,0	0/0:24,0:24:72.23:0,72,2121	0/0:22,0:22:66.21:0,66,1965	0/0:28,0:28:81.28:0,81,2570	0/0:24,0:24:69.24:0,69,2166	0/0:25,0:25:72.25:0,72,2275	0/0:27,0:27:75.26:0,75,2367	0/0:20,0:20:60.16:0,60,1719	0/0:29,0:29:69.24:0,69,2189	1/1:0,12:12:30.02:600,30,0	1/1:0,13:13:27.01:536,27,0	1/1:0,10:10:15.05:316,15,0	0/0:15,0:15:45.15:0,45,1426	0/0:29,0:29:81.27:0,81,2492	0/0:27,0:27:81.26:0,81,2499	0/0:9,0:9:27.09:0,27,761
chr10	63282988	.	AGCG	A	6020.65	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=10.510;DP=515;FS=3.532;HRun=0;HaplotypeScore=78.5852;InbreedingCoeff=0.9555;MQ=83.80;MQ0=0;MQRankSum=-4.451;QD=28.27;ReadPosRankSum=4.946;VQSLOD=4.9253;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:11,18:29:36.12:556,36,0	1/1:4,6:10:15.05:223,15,0	0/0:13,0:13:23.56:0,24,582	0/0:20,0:20:48.12:0,48,904	1/1:3,6:9:9.50:140,10,0	0/0:16,0:16:39.13:0,39,792	0/0:38,0:38:96.33:0,96,1997	1/1:5,11:16:33.10:483,33,0	1/1:4,26:30:60.20:928,60,0	0/0:20,0:20:42.14:0,42,860	0/0:6,0:6:8.99:0,9,148	0/0:22,0:22:51.17:0,51,1093	1/1:0,10:10:27.09:418,27,0	0/0:20,0:20:45.15:0,45,952	0/0:14,0:14:33.11:0,33,686	0/0:17,0:17:42.14:0,42,881	1/1:2,32:34:75.25:1160,75,0	1/1:2,24:26:63.21:964,63,0	0/0:18,0:18:36.09:0,36,705	0/0:6,0:6:12.04:0,12,225	0/0:46,0:46:99:0,120,2452	1/1:7,7:14:21.03:298,21,0	1/1:5,7:12:12:155,12,0	1/1:1,22:23:45.15:696,45,0	0/0:12,0:12:18.06:0,18,347	0/0:17,0:17:27.05:0,27,501	0/0:14,0:14:27.09:0,27,552	0/0:3,0:3:6.02:0,6,128
chr10	63283324	.	T	TG	4790.95	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-13.266;DP=691;FS=4.138;HRun=0;HaplotypeScore=90.1074;InbreedingCoeff=0.9993;MQ=80.54;MQ0=0;MQRankSum=-1.175;QD=46.07;ReadPosRankSum=-0.391;VQSLOD=4.2805;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,117,1599	1/1:0,8:8:24.08:380,24,0	0/0:17,0:17:45.08:0,45,577	0/0:17,0:17:48.01:0,48,602	0/0:19,0:19:54.06:0,54,696	0/0:23,0:23:69.21:0,69,934	0/0:29,0:29:84.26:0,84,1141	1/1:0,29:29:87.30:1390,87,0	0/0:25,0:25:75.25:0,75,1049	0/0:30,0:30:87.29:0,87,1204	0/0:11,0:11:33.10:0,33,447	0/0:35,0:35:99:0,105,1384	0/0:28,0:28:81.27:0,81,1133	0/0:27,0:27:81.26:0,81,1117	0/0:19,0:19:57.19:0,57,794	0/0:24,0:24:72.23:0,72,989	1/1:0,36:36:99:1630,102,0	1/1:0,31:31:87.30:1390,87,0	0/0:23,0:23:59.57:0,60,823	0/0:14,0:14:39.12:0,39,528	0/0:58,0:58:99:0,172,2373	0/0:25,0:25:69.14:0,69,918	0/0:13,0:13:39.11:0,39,510	0/0:33,0:32:99:0,99,1382	0/0:21,0:21:63.20:0,63,867	0/0:21,0:21:60.20:0,60,838	0/0:22,0:22:63.19:0,63,849	0/0:13,0:13:36.12:0,36,503
chr10	63284130	.	T	TCCC	535.14	PASS	AB=0.995;AC=29;AF=0.518;AN=56;BaseQRankSum=-5.840;DP=400;FS=2.896;HRun=13;HaplotypeScore=108.3654;InbreedingCoeff=0.4349;MQ=82.75;MQ0=1;MQRankSum=-0.455;QD=2.40;ReadPosRankSum=-4.241;VQSLOD=-0.5808;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:22,2:24:29.69:255,30,0	0/0:12,0:12:18.45:0,18,78	0/0:19,0:18:7.96:0,8,97	0/1:18,0:20:17.16:17,0,102	1/1:10,1:11:8.65:101,9,0	0/0:10,0:12:5.59:0,6,35	0/0:19,0:21:9.18:0,9,55	0/0:29,0:29:38.56:0,39,195	1/1:5,7:12:12.20:135,12,0	0/0:8,0:8:1.75:0,2,5	0/1:7,0:7:0:0,0,0	1/1:20,0:21:2.92:24,3,0	0/1:3,0:3:0:0,0,0	1/1:15,0:15:0.36:1,0,0	1/1:14,0:14:0.89:3,1,0	1/1:8,0:8:1.55:4,2,0	0/0:36,0:36:79.97:0,80,364	0/0:18,0:18:41.72:0,42,197	1/1:9,0:9:0.89:3,1,0	0/1:10,0:10:0:0,0,0	0/1:19,0:20:0:0,0,0	1/1:5,0:5:2.98:23,3,0	0/1:7,0:7:0:0,0,0	1/1:8,0:8:6.02:87,6,0	0/1:8,0:8:0:0,0,0	0/1:13,0:13:0:0,0,0	0/0:18,0:20:3.81:0,4,32	0/1:3,0:5:21.41:21,0,23
chr10	63284132	.	C	CCCT	1186.10	PASS	AB=0.985;AC=19;AF=0.339;AN=56;BaseQRankSum=7.417;DP=387;FS=41.454;HRun=0;HaplotypeScore=103.4383;InbreedingCoeff=0.7191;MQ=80.44;MQ0=1;MQRankSum=-1.788;QD=6.66;ReadPosRankSum=5.745;VQSLOD=0.6670;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:22,1:23:39.82:446,40,0	1/1:12,0:12:17.48:75,17,0	0/0:19,0:16:24.32:0,24,386	0/1:20,0:19:3.33:3,0,306	1/1:6,3:10:8.79:131,9,0	0/0:12,0:12:26.95:0,27,240	0/0:21,0:21:48.51:0,49,447	1/1:28,0:28:50.25:291,50,0	1/1:12,1:13:14.16:174,14,0	0/0:10,0:10:6:0,6,54	0/0:6,0:6:11.63:0,12,73	0/0:19,0:19:36.15:0,36,307	1/1:3,0:3:5.63:30,6,0	0/0:15,0:15:26.86:0,27,210	0/0:14,0:14:24.35:0,24,221	0/0:7,0:7:14.87:0,15,118	1/1:38,0:38:18.95:81,19,0	0/1:18,0:18:0.39:28,0,0	0/0:9,0:9:21.68:0,22,158	0/0:10,0:10:11.66:0,12,84	0/0:17,0:17:30.41:0,30,247	0/1:5,0:5:17.48:41,0,17	0/0:6,0:6:0:0,0,0	1/1:7,0:7:5.97:77,6,0	0/0:6,0:6:14.37:0,14,114	0/0:13,0:11:14.99:0,15,129	0/0:20,0:20:31.93:0,32,287	0/0:5,0:5:13.28:0,13,107
chr10	63284133	.	C	CCT	1404.25	PASS	AB=0.974;AC=19;AF=0.339;AN=56;BaseQRankSum=8.185;DP=379;FS=80.934;HRun=0;HaplotypeScore=93.1812;InbreedingCoeff=0.6704;MQ=82.80;MQ0=1;MQRankSum=-2.134;QD=7.98;ReadPosRankSum=7.100;VQSLOD=-0.2737;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:20,2:22:20.69:393,21,0	1/1:12,0:12:23.45:98,23,0	0/0:20,0:17:24.31:0,24,371	0/1:22,0:20:21.51:22,0,299	1/1:9,1:10:8.90:104,9,0	0/0:11,0:11:26.94:0,27,228	0/0:21,0:21:48.02:0,48,431	1/1:29,0:29:68.85:378,69,0	0/1:11,1:12:8.48:117,0,8	0/0:10,0:10:5.99:0,6,50	0/0:5,0:5:11.63:0,12,73	0/0:18,0:18:36.15:0,36,307	1/1:3,0:3:5.63:30,6,0	0/0:14,0:14:27.34:0,27,211	0/0:13,0:13:25.07:0,25,217	0/0:8,0:8:14.90:0,15,119	1/1:36,0:36:63.74:244,64,0	1/1:18,0:18:28.79:132,29,0	0/0:9,0:9:22.77:0,23,155	0/0:9,0:9:11.66:0,12,84	0/0:16,0:16:29.94:0,30,247	0/1:5,0:5:18.59:40,0,19	0/0:6,0:6:0:0,0,0	1/1:7,0:7:5.67:42,6,0	0/0:5,0:6:14.37:0,14,114	0/0:13,0:11:14.99:0,15,129	0/0:19,0:19:32.79:0,33,279	0/0:5,0:5:13.16:0,13,97
chr10	63284134	.	C	CT	2893.75	PASS	AB=0.723;AC=17;AF=0.304;AN=56;BaseQRankSum=7.859;DP=378;FS=65.111;HRun=0;HaplotypeScore=67.3464;InbreedingCoeff=0.6783;MQ=82.98;MQ0=1;MQRankSum=-1.028;QD=18.79;ReadPosRankSum=7.860;VQSLOD=0.7688;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:22:13.12:231,13,0	1/1:0,11:11:26.85:279,27,0	0/0:19,0:16:41.49:0,41,361	0/0:24,0:22:22.48:0,22,328	1/1:10,0:10:8.20:42,8,0	0/0:11,0:11:26.92:0,27,218	0/0:21,0:21:48.36:0,48,412	1/1:2,28:30:83.52:845,84,0	0/1:12,0:12:13.15:40,0,13	0/0:9,0:9:5.60:0,6,37	0/0:5,0:5:11.63:0,12,73	0/0:18,0:18:36.62:0,37,308	1/1:3,0:3:5.63:30,6,0	0/0:14,0:14:28.28:0,28,212	0/0:14,0:14:25.78:0,26,215	0/0:8,0:8:14.94:0,15,122	1/1:0,38:38:90.16:998,90,0	1/1:0,17:17:51.09:582,51,0	0/0:9,0:9:23.71:0,24,174	0/0:8,0:8:11.66:0,12,84	0/0:15,0:15:29.94:0,30,247	0/1:2,3:5:14.47:14,0,22	0/0:1,6:7:0:0,0,0	0/1:1,5:6:6.55:24,0,7	0/0:6,0:6:14.37:0,14,114	0/0:12,0:10:14.99:0,15,129	0/0:19,0:19:36.10:0,36,276	0/0:5,0:5:13.53:0,14,102
chr10	63285060	.	TAC	T	4957.49	PASS	AB=0.648;AC=28;AF=0.500;AN=56;BaseQRankSum=-4.407;DP=593;FS=0.497;HRun=0;HaplotypeScore=98.3749;InbreedingCoeff=0.7804;MQ=74.07;MQ0=13;MQRankSum=5.712;QD=18.16;ReadPosRankSum=5.640;VQSLOD=4.5080;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:29:18:0,18,168	0/0:2,0:7:3:0,3,26	0/0:39,0:23:12.03:0,12,156	0/0:40,0:31:15.52:0,16,220	0/0:13,0:33:18.40:0,18,162	1/1:4,14:18:33.09:376,33,0	1/1:5,13:18:27.08:308,27,0	0/0:32,0:32:53.92:0,54,536	0/0:6,0:15:26.99:0,27,250	1/1:6,12:19:39.09:431,39,0	1/1:5,11:19:32.75:336,33,0	1/1:6,16:22:45.13:513,45,0	0/0:7,0:12:14.99:0,15,128	1/1:1,4:5:12.03:137,12,0	1/1:8,11:20:29.92:322,30,0	1/1:7,6:13:18.05:205,18,0	0/0:11,0:18:2.86:0,3,26	0/0:17,0:27:24:0,24,257	1/1:10,3:13:11.87:117,12,0	1/1:10,13:25:44.71:457,45,0	0/1:8,8:16:25.83:181,0,26	0/0:12,0:20:13.27:0,13,68	0/0:10,0:18:17.48:0,17,125	0/0:9,0:21:13.89:0,14,91	1/1:8,16:25:41.62:435,42,0	0/1:9,13:22:24.69:398,0,25	1/1:8,17:25:21.23:455,21,0	1/1:2,9:12:26.91:287,27,0
chr10	63285545	.	T	TTA	4490.47	PASS	AB=0.835;AC=46;AF=0.852;AN=54;BaseQRankSum=-4.431;DP=258;FS=0.000;HRun=0;HaplotypeScore=47.3750;InbreedingCoeff=0.0996;MQ=103.10;MQ0=2;MQRankSum=-2.227;QD=17.82;ReadPosRankSum=3.535;VQSLOD=4.3344;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:4,6:10:16.46:276,0,16	0/0:4,0:4:2.04:0,2,6	0/1:17,0:11:12.47:31,0,12	0/1:52,0:28:7.79:8,0,123	1/1:1,5:6:9.03:137,9,0	1/1:2,3:5:12.03:175,12,0	1/1:1,3:4:3.01:50,3,0	1/1:12,1:24:29.52:289,30,0	1/1:0,0:3:9:80,9,0	1/1:0,6:6:18.06:287,18,0	1/1:1,3:4:12.04:197,12,0	1/1:3,5:8:12.04:198,12,0	1/1:1,0:6:12:106,12,0	1/1:0,2:2:6.02:99,6,0	1/1:1,1:2:3.01:49,3,0	1/1:0,2:2:3.01:50,3,0	1/1:9,0:26:26.80:283,27,0	1/1:3,0:17:33.02:292,33,0	0/1:6,4:10:71.44:211,0,71	1/1:0,1:1:3.01:49,3,0	1/1:0,3:3:9.03:149,9,0	1/1:1,0:2:3:26,3,0	0/0:1,0:1:2.50:0,2,9	./.	1/1:1,10:11:21.07:347,21,0	1/1:1,3:4:9.03:149,9,0	1/1:2,7:9:18.06:297,18,0	1/1:1,16:17:7.62:656,8,0
chr10	63287132	.	TCACACA	T	676.97	PASS	AB=0.833;AC=8;AF=0.154;AN=52;BaseQRankSum=0.880;DP=448;FS=14.077;HRun=0;HaplotypeScore=98.2010;InbreedingCoeff=0.4876;MQ=57.74;MQ0=13;MQRankSum=-1.257;QD=12.77;ReadPosRankSum=1.833;VQSLOD=1.4506;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:29:21.54:0,22,479	0/0:10,0:12:15.05:0,15,421	0/0:49,0:15:7.57:0,8,108	0/0:53,0:20:12.04:0,12,284	0/0:10,0:24:15.06:0,15,325	0/0:12,0:15:8.82:0,9,245	./.	0/0:30,0:29:45.13:0,45,953	0/0:8,0:9:3.01:0,3,78	0/0:9,0:8:18.06:0,18,412	./.	0/0:8,0:11:12.04:0,12,278	1/1:3,4:7:12.51:245,13,0	0/0:7,0:7:2.69:0,3,49	0/0:8,0:10:5.56:0,6,153	0/0:6,0:6:3.01:0,3,74	0/0:21,0:28:12.02:0,12,258	0/0:16,0:15:18.06:0,18,428	0/0:10,0:10:18.02:0,18,365	0/0:14,0:13:4.24:0,4,148	0/1:20,0:20:0:0,0,0	0/1:3,3:6:12.27:137,0,12	1/1:5,8:13:18.06:361,18,0	1/1:4,3:7:3.01:62,3,0	0/0:8,0:10:3.01:0,3,78	0/0:13,0:16:29.89:0,30,721	0/0:11,0:13:30.10:0,30,740	0/0:6,0:6:8.99:0,9,181
chr10	63287724	.	C	CT	6539.37	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=10.416;DP=489;FS=7.586;HRun=8;HaplotypeScore=68.6782;InbreedingCoeff=0.9937;MQ=75.33;MQ0=0;MQRankSum=-1.123;QD=27.13;ReadPosRankSum=0.998;VQSLOD=5.4905;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,28:30:81.24:928,81,0	1/1:2,5:7:15.04:173,15,0	0/0:9,0:9:14.35:0,14,157	0/0:10,0:10:23.93:0,24,206	1/1:5,24:29:44.75:767,45,0	0/0:18,0:18:48.03:0,48,439	0/0:19,0:18:38.99:0,39,352	1/1:6,32:37:68.80:1036,69,0	1/1:5,13:18:33.10:381,33,0	0/0:19,0:19:39.02:0,39,357	0/0:13,0:13:36.01:0,36,329	0/0:15,0:15:45.02:0,45,412	1/1:1,13:14:33.57:381,34,0	0/0:19,0:19:45.01:0,45,412	0/0:14,0:14:39.01:0,39,357	0/0:13,0:13:33:0,33,298	1/1:5,30:34:84.25:969,84,0	1/1:1,16:18:47.97:534,48,0	0/0:17,0:17:42.01:0,42,381	0/0:11,0:11:29.98:0,30,264	0/0:11,0:10:21:0,21,192	1/1:3,13:16:36.11:416,36,0	1/1:0,13:14:35.16:444,35,0	1/1:5,17:22:45.12:510,45,0	0/0:13,0:13:35.05:0,35,308	0/0:14,0:14:39.02:0,39,357	0/0:23,0:23:63.03:0,63,577	0/0:10,0:10:27.01:0,27,247
chr10	63287833	.	A	AACAC	3901.44	PASS	AB=0.744;AC=51;AF=0.981;AN=52;BaseQRankSum=0.424;DP=456;FS=5.682;HRun=0;HaplotypeScore=111.5512;InbreedingCoeff=-0.1024;MQ=63.53;MQ0=9;MQRankSum=-1.403;QD=9.75;ReadPosRankSum=-1.446;VQSLOD=2.2216;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:21,0:32:41.70:42,0,73	1/1:2,0:2:3.01:53,3,0	./.	./.	1/1:6,0:10:5.49:25,5,0	1/1:17,0:21:3.62:282,4,0	1/1:28,5:35:9.92:195,10,0	1/1:23,0:23:12.98:250,13,0	1/1:7,0:16:8.46:45,8,0	1/1:16,0:16:21.60:227,22,0	1/1:6,0:6:3.01:57,3,0	1/1:19,0:19:12.02:218,12,0	1/1:13,0:13:12.90:198,13,0	1/1:17,0:17:15.03:276,15,0	1/1:6,0:6:3.01:70,3,0	1/1:10,0:10:6.02:106,6,0	1/1:15,0:13:5.99:91,6,0	1/1:9,0:9:8.96:128,9,0	1/1:11,0:11:6.02:115,6,0	1/1:15,0:15:6.02:125,6,0	1/1:23,0:22:17.19:155,17,0	1/1:15,0:15:2.98:54,3,0	1/1:11,0:11:9.03:176,9,0	1/1:18,6:30:14.70:276,15,0	1/1:5,4:9:3.01:71,3,0	1/1:7,0:12:15.10:228,15,0	1/1:10,0:14:9.03:172,9,0	1/1:8,0:8:12.04:269,12,0
chr10	63287961	.	GGAGTC	G	1924.51	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=7.819;DP=414;FS=11.510;HRun=0;HaplotypeScore=106.4307;InbreedingCoeff=0.9675;MQ=78.03;MQ0=0;MQRankSum=-8.590;QD=35.64;ReadPosRankSum=0.568;VQSLOD=2.9391;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,105,3158	1/1:2,4:6:6.02:134,6,0	0/0:24,0:24:69.12:0,69,1831	0/0:28,0:28:84.29:0,84,2404	0/0:13,0:13:36.05:0,36,949	0/0:15,0:15:45.15:0,45,1361	0/0:18,0:18:48.16:0,48,1439	1/1:4,7:11:21.07:421,21,0	1/1:1,11:12:33.11:725,33,0	0/0:12,0:12:36.12:0,36,1101	0/0:10,0:10:30.10:0,30,893	0/0:18,0:18:54.16:0,54,1520	0/0:10,0:10:30.10:0,30,934	0/0:14,0:14:39.13:0,39,1190	0/0:17,0:17:51.16:0,51,1474	0/0:13,0:13:39.13:0,39,1130	1/1:5,13:18:24.04:479,24,0	1/1:1,6:7:15.05:334,15,0	0/0:12,0:12:33.11:0,33,1028	0/0:7,0:7:21.07:0,21,644	0/0:27,0:27:72.25:0,72,2213	0/0:9,0:9:24.08:0,24,688	0/0:13,0:13:39.13:0,39,1047	0/0:13,0:13:39.13:0,39,1147	0/0:8,0:8:24.08:0,24,751	0/0:18,0:18:54.19:0,54,1640	0/0:15,0:15:45.08:0,45,1073	0/0:11,0:11:33.11:0,33,1032
chr10	63289934	.	A	AT	581.88	PASS	AB=0.769;AC=10;AF=0.179;AN=56;BaseQRankSum=0.141;DP=447;FS=28.007;HRun=10;HaplotypeScore=47.3131;InbreedingCoeff=0.6942;MQ=70.70;MQ0=5;MQRankSum=-4.394;QD=12.12;ReadPosRankSum=0.489;VQSLOD=1.0120;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:83.77:0,84,679	1/1:1,1:2:3.01:32,3,0	0/0:19,0:10:15.70:0,16,115	0/0:27,0:17:13.52:0,14,159	0/0:24,0:24:53.46:0,53,413	0/0:15,0:15:44.91:0,45,363	0/0:16,0:16:41.91:0,42,341	1/1:2,3:5:9.02:96,9,0	1/1:1,2:3:6.02:64,6,0	0/0:13,0:13:32.95:0,33,271	0/0:19,1:20:19.15:0,19,351	0/0:16,0:16:38.91:0,39,315	0/0:7,0:7:17.98:0,18,148	0/0:16,0:16:41.95:0,42,344	0/0:22,0:22:56.85:0,57,458	0/1:10,1:12:2.98:3,0,174	1/1:4,14:18:17.46:391,17,0	0/1:3,5:8:6.60:141,0,7	0/0:25,0:25:68.90:0,69,565	0/0:15,0:18:45.06:0,45,338	0/0:14,0:16:37.02:0,37,283	0/0:9,0:9:23.97:0,24,197	0/0:12,0:13:25.97:0,26,199	0/0:20,0:22:51.95:0,52,398	0/0:20,2:22:24.92:0,25,408	0/0:14,0:14:35.95:0,36,295	0/0:20,1:21:8.98:0,9,266	0/0:7,0:7:14.95:0,15,120
chr10	63290746	.	TG	T	2587.31	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=6.323;DP=547;FS=2.580;HRun=7;HaplotypeScore=59.9718;InbreedingCoeff=0.9822;MQ=73.87;MQ0=0;MQRankSum=-2.269;QD=23.10;ReadPosRankSum=3.239;VQSLOD=3.9838;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:90.28:0,90,1123	1/1:0,8:8:24.05:244,24,0	0/0:9,0:9:18.04:0,18,211	0/0:17,0:17:22.30:0,22,368	0/0:17,0:17:45.13:0,45,553	0/0:10,0:10:30.10:0,30,377	0/0:27,0:27:78.21:0,78,947	1/1:3,15:18:45.05:438,45,0	1/1:4,23:27:63.14:642,63,0	0/0:20,0:20:54.16:0,54,656	0/0:13,0:13:30.10:0,30,375	0/0:30,0:30:84.21:0,84,1023	0/0:6,0:6:12.04:0,12,151	0/0:28,0:28:78.24:0,78,970	0/0:24,0:24:69.22:0,69,866	0/0:13,0:13:39.12:0,39,491	1/1:4,14:18:39.08:398,39,0	1/1:4,37:41:99:1040,102,0	0/0:18,0:18:45.13:0,45,551	0/0:13,0:13:36.10:0,36,439	0/0:36,0:36:99:0,99,1201	0/0:16,0:16:42.12:0,42,514	0/0:8,0:8:15.05:0,15,188	0/0:35,0:35:99:0,99,1215	0/0:18,0:18:48.15:0,48,601	0/0:17,0:17:45.12:0,45,538	0/0:20,0:20:60.18:0,60,740	0/0:5,0:5:15.05:0,15,189
chr10	63290753	.	GT	G	426.39	PASS	AB=0.978;AC=7;AF=0.125;AN=56;BaseQRankSum=12.627;DP=555;FS=0.934;HRun=1;HaplotypeScore=66.8085;InbreedingCoeff=0.6043;MQ=76.80;MQ0=0;MQRankSum=-0.122;QD=3.71;ReadPosRankSum=3.625;VQSLOD=0.4486;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:90.17:0,90,1168	0/1:9,0:9:5.39:28,0,5	0/0:11,0:11:15.61:0,16,312	0/0:20,0:20:44.48:0,44,580	0/0:17,0:17:25.17:0,25,547	0/0:13,0:13:39.03:0,39,480	0/0:27,0:27:81.15:0,81,1064	0/1:22,0:22:6.30:6,0,141	0/1:26,2:28:4.25:157,0,4	0/0:20,0:20:54.16:0,54,735	0/0:11,0:11:33.07:0,33,423	0/0:31,0:31:90.23:0,90,1157	0/0:5,0:5:12.04:0,12,160	0/0:29,0:29:78.20:0,78,1066	0/0:27,0:27:81.11:0,81,983	0/0:13,0:13:39.13:0,39,544	1/1:15,0:15:10.69:104,11,0	1/1:39,2:41:38.29:267,38,0	0/0:17,0:17:50.81:0,51,611	0/0:13,0:13:36.06:0,36,471	0/0:37,0:37:99:0,108,1370	0/0:17,0:17:45.12:0,45,598	0/0:6,0:6:14.07:0,14,201	0/0:33,0:33:96.26:0,96,1280	0/0:18,0:18:51.07:0,51,668	0/0:18,0:18:48.11:0,48,609	0/0:20,0:20:60.20:0,60,835	0/0:6,0:6:18.04:0,18,237
chr10	63291636	.	GT	G	7920.12	PASS	AB=0.969;AC=42;AF=0.750;AN=56;BaseQRankSum=-1.317;DP=549;FS=3.800;HRun=10;HaplotypeScore=62.4279;InbreedingCoeff=0.8476;MQ=72.93;MQ0=3;MQRankSum=-1.151;QD=18.50;ReadPosRankSum=1.210;VQSLOD=5.8428;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:10,1:41:57.02:0,57,401	1/1:0,11:11:29.98:260,30,0	0/1:22,0:10:11.96:12,0,50	0/1:14,1:11:0.53:1,0,19	0/0:6,0:22:51.87:0,52,305	1/1:0,18:19:53.03:449,53,0	1/1:4,16:20:38.99:339,39,0	1/1:3,25:28:74.97:650,75,0	1/1:1,8:9:23.99:208,24,0	1/1:3,17:20:50.98:443,51,0	1/1:2,10:12:26.98:233,27,0	1/1:2,20:22:47.98:417,48,0	0/0:13,0:13:39.06:0,39,415	1/1:4,12:16:26.86:234,27,0	1/1:3,18:21:44.99:391,45,0	1/1:1,17:18:44.98:391,45,0	1/1:9,41:50:99:963,111,0	1/1:2,16:18:35.99:312,36,0	1/1:5,18:24:53:445,53,0	1/1:4,21:25:56.97:495,57,0	1/1:2,16:18:35.99:312,36,0	0/0:17,0:17:42.02:0,42,440	0/0:11,0:11:27.07:0,27,299	0/0:17,0:17:42.10:0,42,456	1/1:2,15:17:41.99:365,42,0	1/1:1,23:24:68.95:592,69,0	1/1:1,15:16:11.81:331,12,0	1/1:0,3:3:9:78,9,0
chr10	63293012	.	ATT	A	8452.39	PASS	AB=0.500;AC=31;AF=0.554;AN=56;BaseQRankSum=-6.434;DP=657;FS=0.674;HRun=12;HaplotypeScore=116.7353;InbreedingCoeff=0.9381;MQ=69.82;MQ0=6;MQRankSum=-1.302;QD=22.13;ReadPosRankSum=5.814;VQSLOD=4.0782;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:37:99:0,102,1471	0/0:3,0:11:15.03:0,15,155	0/0:25,0:24:22.59:0,23,508	0/0:8,0:8:14.08:0,14,184	0/0:22,0:24:65.15:0,65,882	1/1:3,20:23:57.12:580,57,0	1/1:5,18:23:42.05:427,42,0	0/0:12,0:36:77.01:0,77,734	0/0:2,0:17:24.03:0,24,228	1/1:5,29:34:83.90:835,84,0	1/1:3,22:24:54.08:549,54,0	1/1:1,16:19:41.56:456,42,0	0/1:0,1:13:5.45:5,0,52	1/1:2,16:18:39.07:397,39,0	1/1:4,25:29:54.09:549,54,0	1/1:3,19:24:50.56:552,51,0	0/0:6,0:26:69.09:0,69,674	0/0:3,0:19:47.93:0,48,439	1/1:3,16:20:41.77:471,42,0	1/1:5,19:23:51.08:519,51,0	1/1:4,26:30:75.13:763,75,0	0/0:4,1:18:29.94:0,30,105	0/0:8,0:34:58.65:0,59,267	0/0:2,0:18:34.93:0,35,123	1/1:2,22:24:60.11:610,60,0	1/1:6,21:27:57.05:580,57,0	1/1:4,24:28:59.80:610,60,0	1/1:1,19:19:54.12:549,54,0
chr10	63293936	.	TAAG	T	11079.63	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=1.858;DP=389;FS=24.963;HRun=0;HaplotypeScore=132.6154;InbreedingCoeff=0.9112;MQ=85.24;MQ0=0;MQRankSum=-8.314;QD=37.69;ReadPosRankSum=5.318;VQSLOD=3.6631;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,26:36:60.20:938,60,0	1/1:0,2:2:6.02:94,6,0	0/0:18,0:18:44.94:0,45,909	0/0:16,0:16:42.14:0,42,854	1/1:0,7:7:18.06:284,18,0	1/1:2,14:16:42.14:655,42,0	1/1:2,15:16:39.13:618,39,0	1/1:2,7:9:14.85:235,15,0	1/1:1,16:17:48.16:761,48,0	1/1:3,13:16:39.13:618,39,0	1/1:0,4:4:9.03:142,9,0	1/1:3,16:19:48.16:761,48,0	0/0:11,0:11:30.10:0,30,654	1/1:1,15:16:42.14:664,42,0	1/1:0,6:6:18.06:285,18,0	1/1:1,10:11:30.10:476,30,0	1/1:0,24:24:66.23:1046,66,0	1/1:2,16:18:48.16:759,48,0	1/1:2,9:11:21.07:319,21,0	1/1:1,4:5:12.04:180,12,0	1/1:4,16:20:42.14:653,42,0	0/0:11,0:11:24.08:0,24,504	0/0:3,0:3:9.03:0,9,170	0/0:36,0:36:99:0,99,2104	1/1:1,3:4:6.02:94,6,0	1/1:4,15:19:45.14:690,45,0	1/1:0,14:14:42.14:666,42,0	1/1:0,3:3:9.03:143,9,0
chr10	63295535	.	TAA	T	3596.53	PASS	AB=0.500;AC=31;AF=0.554;AN=56;BaseQRankSum=2.459;DP=251;FS=10.505;HRun=12;HaplotypeScore=36.5361;InbreedingCoeff=0.8483;MQ=56.93;MQ0=4;MQRankSum=-2.884;QD=25.87;ReadPosRankSum=3.473;VQSLOD=2.4156;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:17:44.18:0,44,573	0/0:5,0:5:15.05:0,15,219	0/0:5,0:2:6.02:0,6,82	0/0:5,0:2:9.40:0,9,67	0/0:15,0:15:44.88:0,45,541	1/1:0,5:5:9.02:92,9,0	1/1:0,7:7:21.05:214,21,0	0/0:12,0:16:41.10:0,41,515	0/0:9,0:9:27.09:0,27,385	1/1:2,11:11:33.05:327,33,0	1/1:3,7:8:21.05:214,21,0	1/1:0,8:8:24.05:244,24,0	0/1:0,1:3:6.88:23,0,7	1/1:0,9:9:27.06:275,27,0	1/1:0,12:12:36.08:366,36,0	1/1:0,3:3:9.02:92,9,0	0/0:12,0:13:26.53:0,27,335	0/0:9,0:9:22.32:0,22,315	1/1:2,7:8:21.03:214,21,0	1/1:2,16:18:42.04:427,42,0	1/1:0,3:3:9.02:92,9,0	0/0:1,0:6:12.99:0,13,80	0/0:1,0:8:4.87:0,5,17	0/0:0,0:4:7.49:0,7,26	1/1:1,3:3:9.02:92,9,0	1/1:0,11:12:35.82:347,36,0	1/1:0,11:11:30.07:305,30,0	1/1:1,9:11:27.05:275,27,0
chr10	63296311	.	C	CG	311.65	PASS	AB=0.772;AC=7;AF=0.130;AN=54;BaseQRankSum=1.085;DP=426;FS=1.990;HRun=0;HaplotypeScore=85.7509;InbreedingCoeff=0.4839;MQ=38.56;MQ0=31;MQRankSum=-0.338;QD=5.47;ReadPosRankSum=0.723;VQSLOD=2.9137;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:31:87.29:0,87,1202	0/0:13,0:13:39.12:0,39,488	./.	0/1:10,0:9:6.22:6,0,81	0/0:31,0:29:69.22:0,69,952	0/0:13,0:12:26.82:0,27,266	0/0:8,0:8:21.06:0,21,259	0/0:36,0:29:81.25:0,81,1044	0/0:12,0:9:27.09:0,27,364	0/0:9,0:8:24.07:0,24,295	0/0:12,0:10:17.73:0,18,177	0/0:17,0:16:36.07:0,36,399	0/1:5,8:13:2.33:162,0,2	0/0:12,0:10:14.88:0,15,165	0/0:10,0:10:27.08:0,27,352	0/0:13,0:12:27.03:0,27,313	0/0:33,0:31:84.27:0,84,1081	0/0:20,0:13:36.08:0,36,463	0/0:16,0:14:36.08:0,36,462	0/0:13,0:11:30.09:0,30,396	0/0:6,0:4:9.01:0,9,108	1/1:2,2:4:4.25:60,4,0	0/1:13,10:19:54.62:146,0,55	1/1:4,2:6:6.01:59,6,0	0/0:21,0:19:42.06:0,42,471	0/0:9,0:7:21.06:0,21,239	0/0:15,0:14:30.07:0,30,355	0/0:12,0:11:27.04:0,27,305
chr10	63296316	.	A	AAAATAAAT	9163.95	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-4.228;DP=465;FS=5.236;HRun=0;HaplotypeScore=105.1550;InbreedingCoeff=0.8472;MQ=41.52;MQ0=28;MQRankSum=-5.024;QD=27.94;ReadPosRankSum=0.952;VQSLOD=4.3279;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:33:69.20:0,69,1594	1/1:3,0:14:29.99:268,30,0	0/0:7,0:2:6.01:0,6,59	0/0:11,0:10:25.55:0,26,456	0/0:32,0:30:41.78:0,42,912	1/1:4,7:13:21.07:872,21,0	1/1:4,3:8:6.02:249,6,0	1/1:17,0:29:38.88:317,39,0	1/1:8,0:12:11.98:98,12,0	1/1:6,4:11:18.05:641,18,0	1/1:3,5:10:14.88:404,15,0	1/1:6,8:15:18.06:748,18,0	0/0:14,0:14:20.72:0,21,247	1/1:5,4:8:9.03:373,9,0	1/1:6,2:12:6.02:249,6,0	1/1:4,5:10:11.90:499,12,0	1/1:11,0:32:59.90:490,60,0	1/1:11,0:15:17.98:148,18,0	1/1:14,3:19:17.42:546,17,0	1/1:10,2:11:3.01:125,3,0	1/1:5,0:3:3.01:76,3,0	0/0:5,0:5:11.97:0,12,121	0/0:25,0:21:27.01:0,27,389	0/0:8,0:7:12.02:0,12,130	1/1:10,9:21:21.07:872,21,0	1/1:4,5:15:29.65:940,30,0	1/1:6,8:19:12.04:498,12,0	1/1:5,7:15:18.06:749,18,0
chr10	63297722	.	CTATT	C	794.36	PASS	AB=0.777;AC=4;AF=0.071;AN=56;BaseQRankSum=6.249;DP=703;FS=1.803;HRun=0;HaplotypeScore=115.0139;InbreedingCoeff=-0.0769;MQ=89.95;MQ0=0;MQRankSum=-7.499;QD=8.54;ReadPosRankSum=-1.718;VQSLOD=2.0846;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,102,2923	0/0:11,0:11:33.10:0,33,881	0/0:27,0:27:81.27:0,81,2084	0/0:30,0:30:84.27:0,84,2152	0/0:23,0:23:69.22:0,69,1932	0/0:16,0:16:48.12:0,48,1324	0/0:29,0:29:87.28:0,87,2446	0/0:30,0:30:90.31:0,90,2564	0/0:28,0:28:84.27:0,84,2332	0/0:25,0:25:75.26:0,75,2161	0/0:15,0:15:45.12:0,45,1179	0/0:19,0:19:57.20:0,57,1614	0/1:14,4:18:77.30:77,0,1121	0/0:36,0:36:99:0,108,2996	0/0:34,0:34:99:0,102,2875	0/0:17,0:17:51.16:0,51,1415	0/0:27,0:27:81.28:0,81,2313	0/0:23,0:23:69.24:0,69,2000	0/0:25,0:25:75.21:0,75,1955	0/0:27,0:27:81.28:0,81,2321	0/0:35,0:35:99:0,105,3039	0/1:19,11:30:99:398,0,1284	0/1:19,14:33:99:334,0,1095	0/1:10,2:12:95.33:95,0,569	0/0:30,0:30:90.31:0,90,2597	0/0:24,0:24:72.24:0,72,2020	0/0:26,0:26:78.25:0,78,2187	0/0:19,0:19:57.20:0,57,1635
chr10	63298403	.	G	GATCCTGTTCTAGGCTC	96495.81	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-6.247;DP=720;FS=2.947;HRun=0;HaplotypeScore=344.2679;InbreedingCoeff=0.9983;MQ=70.74;MQ0=0;MQRankSum=-14.922;QD=158.19;ReadPosRankSum=0.943;VQSLOD=4.5156;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,105,4427	1/1:4,4:8:24.08:1692,24,0	0/0:19,0:19:42.14:0,42,1441	0/0:24,0:24:66.23:0,66,2425	0/0:29,0:29:78.25:0,78,3224	1/1:15,9:24:66.23:4422,66,0	1/1:31,6:37:90.29:4952,90,0	1/1:34,0:34:93.32:5644,93,0	1/1:15,10:25:69.24:4447,69,0	1/1:20,6:26:78.25:4846,78,0	1/1:20,11:31:63.17:2995,63,0	1/1:33,13:46:99:8067,129,0	1/1:9,5:15:39.13:2734,39,0	1/1:19,18:37:99:7311,108,0	1/1:18,11:29:78.27:4589,78,0	1/1:11,8:20:60.21:4138,60,0	1/1:20,4:24:45.14:2403,45,0	1/1:11,5:16:39.13:2518,39,0	1/1:24,4:28:84.25:4254,84,0	1/1:15,11:26:60.21:3923,60,0	1/1:24,2:27:57.20:2767,57,0	1/1:17,5:22:60.21:3077,60,0	1/1:14,6:20:48.16:1789,48,0	1/1:19,8:27:54.19:3594,54,0	1/1:13,10:23:66.23:3555,66,0	1/1:26,6:32:93.32:6330,93,0	1/1:20,6:26:72.72:4861,73,0	1/1:4,3:7:21.07:1588,21,0
chr10	63300335	.	A	ATGTGTGTG	6913.32	PASS	AB=0.921;AC=35;AF=0.673;AN=52;BaseQRankSum=-2.013;DP=629;FS=1.485;HRun=0;HaplotypeScore=193.0360;InbreedingCoeff=0.6320;MQ=51.12;MQ0=12;MQRankSum=-3.092;QD=16.11;ReadPosRankSum=-1.431;VQSLOD=4.1767;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:31,0:31:14.02:307,14,0	1/1:8,0:8:2.96:95,3,0	0/0:22,0:10:6:0,6,72	0/0:16,0:12:3.01:0,3,72	./.	1/1:21,0:19:21.96:548,22,0	1/1:26,0:24:13:259,13,0	1/1:47,0:45:54.03:905,54,0	0/1:32,0:32:0.12:203,0,0	1/1:18,0:16:39.04:971,39,0	0/0:10,0:14:0.47:0,0,1	1/1:19,5:26:3.48:118,3,0	0/0:18,0:18:22.62:0,23,367	0/0:15,0:21:0.29:0,0,0	1/1:8,0:19:0.38:1,0,0	1/1:11,2:20:13.59:381,14,0	1/1:21,0:21:27.64:411,28,0	1/1:20,1:21:22.83:397,23,0	1/1:15,5:22:18.06:519,18,0	1/1:8,6:15:3.48:74,3,0	1/1:25,0:23:6.02:149,6,0	0/0:25,0:25:1.71:0,2,407	0/0:10,0:8:11.47:0,11,91	0/0:33,0:33:42.25:0,42,657	./.	1/1:31,0:29:50.80:1092,51,0	1/1:20,8:29:6.88:171,7,0	1/1:6,0:9:8.80:313,9,0
chr10	63300370	.	TGA	T	990.07	PASS	AB=0.970;AC=18;AF=0.321;AN=56;BaseQRankSum=-1.306;DP=587;FS=8.372;HRun=0;HaplotypeScore=132.3885;InbreedingCoeff=0.0275;MQ=45.44;MQ0=17;MQRankSum=2.350;QD=3.22;ReadPosRankSum=-0.921;VQSLOD=1.7016;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:30:3.48:0,3,30	1/1:5,0:5:2.92:17,3,0	0/0:7,0:4:5.67:0,6,28	0/0:5,0:3:5.87:0,6,39	0/1:17,0:19:3.73:4,0,110	0/1:24,0:22:13.60:14,0,157	0/0:21,0:19:14.99:0,15,128	1/1:28,0:28:2.97:20,3,0	1/1:25,0:22:2.29:118,2,0	0/0:22,0:20:26.99:0,27,261	0/1:20,0:18:11.73:12,0,51	0/0:29,0:30:20.23:0,20,157	0/1:21,1:21:6.23:142,0,6	0/0:24,0:23:29.96:0,30,249	0/0:23,0:22:14.72:0,15,127	0/0:20,0:21:14.51:0,15,97	0/1:23,2:24:21.43:99,0,21	0/1:18,3:22:6.70:100,0,7	0/0:13,0:13:1.74:0,2,20	0/1:15,0:15:11.96:12,0,61	0/0:17,0:16:8.79:0,9,64	0/1:26,0:26:32.26:66,0,32	1/1:17,0:14:26.49:195,26,0	0/1:39,1:40:32.25:323,0,32	0/1:17,0:17:27.22:27,0,78	0/0:27,0:26:11.10:0,11,306	0/0:24,0:23:0.70:0,1,155	0/0:13,0:7:11.94:0,12,108
chr10	63300591	.	TGGCAC	T	3836.22	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=10.952;DP=673;FS=3.053;HRun=0;HaplotypeScore=124.0809;InbreedingCoeff=0.9995;MQ=87.35;MQ0=0;MQRankSum=-2.349;QD=51.15;ReadPosRankSum=1.919;VQSLOD=4.2791;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,147,4595	0/0:9,0:9:27.09:0,27,871	0/0:24,0:24:69.70:0,70,1853	0/0:24,0:24:69.22:0,69,2072	0/0:15,0:15:45.14:0,45,1295	0/0:29,0:29:84.29:0,84,2671	0/0:44,0:44:99:0,126,3909	0/0:34,0:34:99:0,99,2814	0/0:20,0:20:60.21:0,60,1932	0/0:22,0:22:60.21:0,60,1888	0/0:12,0:12:33.10:0,33,940	0/0:35,0:35:99:0,99,2948	1/1:0,18:18:42.14:929,42,0	0/0:24,0:24:69.24:0,69,2213	0/0:24,0:24:72.24:0,72,2248	0/0:22,0:22:63.16:0,63,1908	0/0:26,0:26:78.27:0,78,2497	0/0:16,0:16:42.14:0,42,1354	0/0:16,0:16:45.15:0,45,1291	0/0:16,0:16:42.14:0,42,1300	0/0:41,0:41:99:0,120,3463	1/1:0,18:18:42.10:889,42,0	1/1:0,13:12:30.06:613,30,0	1/1:0,26:26:63.69:1405,64,0	0/0:24,0:23:69.20:0,69,2004	0/0:29,0:29:84.23:0,84,2605	0/0:22,0:21:60.21:0,60,1872	0/0:17,0:17:51.14:0,51,1469
chr10	63301717	.	ATGTGTG	A	5717.70	PASS	AB=0.786;AC=42;AF=0.840;AN=50;BaseQRankSum=6.552;DP=618;FS=17.092;HRun=0;HaplotypeScore=152.3686;InbreedingCoeff=0.3522;MQ=62.28;MQ0=12;MQRankSum=-5.109;QD=11.19;ReadPosRankSum=1.507;VQSLOD=3.2170;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:10,0:29:5.97:72,6,0	1/1:1,7:8:9.03:160,9,0	./.	./.	1/1:7,0:27:27.08:360,27,0	0/1:10,10:21:19.14:288,0,19	1/1:12,11:23:12.03:191,12,0	1/1:36,0:35:14.85:86,15,0	1/1:11,0:24:21.07:293,21,0	1/1:15,14:29:11.26:401,11,0	1/1:8,10:20:18.42:264,18,0	1/1:9,5:14:11.07:170,11,0	1/1:4,0:15:18.06:251,18,0	1/1:9,8:18:17.89:346,18,0	1/1:13,8:20:14.08:242,14,0	1/1:14,15:31:12.94:436,13,0	0/1:22,5:27:17.96:52,0,18	1/1:16,3:20:28.69:412,29,0	1/1:12,2:16:6.10:274,6,0	1/1:11,12:24:10.60:193,11,0	0/1:18,0:17:2.20:62,0,2	./.	1/1:5,0:21:14.71:209,15,0	1/1:3,0:13:9.03:126,9,0	0/1:12,15:27:9.61:401,0,10	0/0:25,0:26:45.11:0,45,948	1/1:10,13:24:22.75:429,23,0	0/0:12,0:12:24.08:0,24,644
chr10	63302054	.	GA	G	5202.32	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=11.528;DP=601;FS=16.659;HRun=9;HaplotypeScore=63.3748;InbreedingCoeff=0.9794;MQ=77.59;MQ0=1;MQRankSum=-0.474;QD=22.14;ReadPosRankSum=1.817;VQSLOD=3.9653;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,27:29:66.02:604,66,0	1/1:1,9:10:27.01:247,27,0	0/0:26,0:25:63.02:0,63,661	0/0:13,0:13:21.06:0,21,239	1/1:4,17:21:44.99:406,45,0	0/0:18,1:19:29.69:0,30,586	0/0:12,1:13:5.60:0,6,305	1/1:6,29:35:86.99:781,87,0	1/1:2,19:21:59.91:536,60,0	0/0:26,0:26:60.17:0,60,686	0/0:18,0:18:54.16:0,54,623	0/0:20,0:20:60.14:0,60,669	1/1:5,16:21:13.40:377,13,0	0/0:24,0:24:66.20:0,66,762	0/0:30,0:30:87.26:0,87,1004	0/0:20,0:20:54.16:0,54,623	1/1:0,27:27:75.04:686,75,0	1/1:2,20:22:51.03:467,51,0	0/0:23,0:24:60:0,60,664	0/0:25,0:25:64.98:0,65,714	0/0:27,0:27:75.18:0,75,843	1/1:3,12:15:33:302,33,0	1/1:2,10:12:26.71:247,27,0	1/1:0,22:22:60.03:549,60,0	0/0:17,0:17:39.12:0,39,450	0/0:20,0:20:57.15:0,57,640	0/0:34,0:33:90.21:0,90,1023	0/0:10,0:10:27.08:0,27,309
chr10	63302193	.	CG	C	2693	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=8.086;DP=458;FS=0.940;HRun=4;HaplotypeScore=47.6579;InbreedingCoeff=0.9969;MQ=83.82;MQ0=0;MQRankSum=-2.560;QD=26.40;ReadPosRankSum=1.727;VQSLOD=2.3598;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,27:30:60.18:719,60,0	0/0:11,0:11:30.07:0,30,383	0/0:9,0:9:27.09:0,27,367	0/0:17,0:17:44.56:0,45,523	1/1:2,6:8:18.05:215,18,0	0/0:13,0:13:36.10:0,36,486	0/0:20,0:20:54.16:0,54,732	0/0:30,0:30:84.27:0,84,1160	1/1:2,12:14:39.12:467,39,0	0/0:13,0:13:36.11:0,36,475	0/0:11,0:11:24.08:0,24,336	0/0:18,0:18:54.17:0,54,737	1/1:2,11:13:30.09:358,30,0	0/0:16,0:16:45.14:0,45,612	0/0:13,0:13:39.13:0,39,546	0/0:14,0:14:39.12:0,39,530	0/0:28,1:29:45.37:0,45,997	0/0:27,0:27:78.25:0,78,1071	0/0:15,0:15:42.07:0,42,533	0/0:15,0:15:39.03:0,39,504	0/0:27,0:27:78.20:0,78,1006	1/1:0,13:13:36.02:413,36,0	1/1:0,9:9:24.07:288,24,0	1/1:1,14:15:36.11:432,36,0	0/0:8,0:7:24.08:0,24,333	0/0:19,0:19:54.16:0,54,737	0/0:15,0:15:39.05:0,39,502	0/0:16,0:16:48.15:0,48,654
chr10	63303845	.	T	TG	1316.44	PASS	AB=0.750;AC=45;AF=0.978;AN=46;BaseQRankSum=-0.723;DP=193;FS=4.395;HRun=0;HaplotypeScore=186.4918;InbreedingCoeff=0.1242;MQ=62.75;MQ0=0;MQRankSum=-1.781;QD=6.97;ReadPosRankSum=1.793;VQSLOD=3.6616;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,7:9:13.04:68,13,0	1/1:0,1:1:2.37:8,2,0	1/1:1,0:4:11.73:85,12,0	0/1:3,0:6:8.25:36,0,8	./.	1/1:2,5:7:11.98:42,12,0	1/1:0,7:7:8.01:31,8,0	1/1:1,8:9:21.08:97,21,0	1/1:2,8:10:21.82:90,22,0	1/1:3,9:12:21.86:88,22,0	./.	1/1:0,13:13:29.25:109,29,0	1/1:1,7:8:18.44:82,18,0	1/1:2,11:13:25.50:89,26,0	1/1:1,12:13:28.39:114,28,0	1/1:0,10:10:23.21:83,23,0	1/1:0,8:8:20.27:79,20,0	1/1:2,7:9:13.46:62,13,0	1/1:0,1:1:1.55:4,2,0	1/1:1,4:5:5.44:28,5,0	1/1:0,0:9:2.50:9,2,0	./.	./.	1/1:0,8:8:2.88:15,3,0	1/1:0,6:6:5.36:42,5,0	1/1:0,6:6:13.54:47,14,0	1/1:2,12:15:25.75:91,26,0	./.
chr10	63303901	.	CA	C	1141.82	PASS	AB=0.577;AC=32;AF=0.696;AN=46;BaseQRankSum=-2.732;DP=193;FS=0.000;HRun=1;HaplotypeScore=236.3043;InbreedingCoeff=0.2470;MQ=30.81;MQ0=0;MQRankSum=0.904;QD=6.80;ReadPosRankSum=2.930;VQSLOD=0.6526;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:1,7:8:0.21:0,0,1	0/0:0,3:3:2.97:0,3,20	./.	./.	0/0:1,3:4:2.65:0,3,10	1/1:0,7:7:5.97:45,6,0	0/1:4,6:10:0:0,0,0	1/1:0,20:20:35.83:248,36,0	0/1:1,7:8:2.03:100,0,2	1/1:0,7:7:11.31:85,11,0	0/0:0,1:1:0:0,0,0	1/1:1,15:16:18.52:114,19,0	1/1:2,14:16:17.56:121,18,0	1/1:0,11:11:5.98:47,6,0	1/1:0,13:12:15.77:101,16,0	0/1:2,14:16:26.24:57,0,26	./.	1/1:0,5:5:8.27:51,8,0	1/1:1,1:2:2.64:12,3,0	./.	1/1:1,3:4:2.99:23,3,0	0/0:1,1:2:0:0,0,0	1/1:1,1:2:2.74:12,3,0	1/1:0,7:7:0.49:5,0,0	1/1:0,5:5:2.27:36,2,0	0/1:3,5:8:6.44:59,0,6	1/1:0,11:11:17.62:132,18,0	./.
chr10	63304127	.	CT	C	224.91	PASS	AC=10;AF=0.500;AN=20;BaseQRankSum=-2.264;DP=113;FS=8.625;HRun=8;HaplotypeScore=13.8097;InbreedingCoeff=0.5153;MQ=31.33;MQ0=28;MQRankSum=-0.725;QD=9.78;ReadPosRankSum=0.543;VQSLOD=-0.0957;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:7:12:0,12,124	./.	0/0:21,0:3:4.56:0,5,35	0/0:19,0:2:0:0,0,0	./.	./.	0/0:2,2:2:0:0,0,0	1/1:2,5:7:12.01:116,12,0	1/1:0,3:1:3:29,3,0	1/1:1,4:5:6.01:58,6,0	./.	./.	./.	./.	./.	./.	1/1:1,4:5:9.01:87,9,0	./.	1/1:2,1:2:3:29,3,0	./.	./.	./.	./.	0/0:3,0:2:3.01:0,3,35	./.	./.	./.	./.
chr10	63306678	.	CT	C	926.33	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.044;DP=321;FS=13.729;HRun=2;HaplotypeScore=36.4074;InbreedingCoeff=0.9064;MQ=92.64;MQ0=0;MQRankSum=-3.364;QD=29.88;ReadPosRankSum=-0.283;VQSLOD=1.5749;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,14:17:45.13:569,45,0	0/0:3,0:3:9.03:0,9,135	0/0:16,0:16:34.21:0,34,497	0/0:16,0:16:41.86:0,42,509	1/1:3,11:14:39.11:479,39,0	0/0:10,0:10:27.08:0,27,384	0/0:11,0:11:33.11:0,33,493	0/0:15,0:15:39.13:0,39,585	0/0:10,0:10:30.08:0,30,427	0/0:12,0:12:36.11:0,36,508	0/0:13,0:13:39.12:0,39,564	0/0:12,0:12:33.09:0,33,456	0/0:7,0:7:21.07:0,21,315	0/0:9,0:9:21.07:0,21,314	0/0:8,0:8:24.08:0,24,360	0/0:13,0:13:39.13:0,39,584	0/0:20,0:20:60.18:0,60,877	0/0:5,0:5:15:0,15,199	0/0:16,0:16:48.16:0,48,718	0/0:11,0:11:33.08:0,33,470	0/0:11,0:11:33.09:0,33,456	0/0:14,0:14:36.11:0,36,520	0/0:14,0:14:42.12:0,42,592	0/0:2,0:2:6.02:0,6,90	0/0:7,0:7:21.07:0,21,314	0/0:13,0:13:39.11:0,39,548	0/0:9,0:9:27.09:0,27,404	0/0:13,0:13:36.12:0,36,539
chr10	63306961	.	C	CT	8817.89	PASS	AB=1.000;AC=43;AF=0.768;AN=56;BaseQRankSum=-2.827;DP=521;FS=0.392;HRun=8;HaplotypeScore=94.2449;InbreedingCoeff=0.8241;MQ=75.81;MQ0=2;MQRankSum=-0.947;QD=21.72;ReadPosRankSum=2.735;VQSLOD=4.8959;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,18:23:39.79:434,40,0	0/0:6,0:6:11.45:0,11,33	0/0:22,0:20:4.43:0,4,267	0/0:18,0:16:30.14:0,30,238	1/1:3,23:26:57.98:631,58,0	1/1:2,12:14:36.10:412,36,0	1/1:1,18:19:48.14:549,48,0	0/1:43,0:43:46.44:46,0,70	0/0:16,0:16:29.34:0,29,107	1/1:4,21:25:63.03:646,63,0	1/1:0,13:13:39.11:445,39,0	1/1:3,9:15:27.30:291,27,0	1/1:4,10:14:21.06:236,21,0	1/1:2,10:13:26.91:289,27,0	1/1:2,12:14:27.08:308,27,0	1/1:4,17:21:30.09:342,30,0	0/0:27,0:27:47.26:0,47,158	0/0:25,0:25:3.15:0,3,97	1/1:9,12:21:37.59:454,38,0	1/1:1,14:15:42.03:451,42,0	1/1:2,13:15:28.04:399,28,0	1/1:2,15:18:45.39:518,45,0	1/1:3,14:17:26.81:334,27,0	1/1:3,12:15:30.08:339,30,0	1/1:2,15:17:38.15:474,38,0	1/1:7,19:27:57.42:615,57,0	1/1:0,14:15:36.08:399,36,0	1/1:0,6:6:18.05:206,18,0
chr10	63307174	.	G	GTGTG	641.97	PASS	AB=1.000;AC=25;AF=0.481;AN=52;BaseQRankSum=-0.008;DP=491;FS=0.000;HRun=0;HaplotypeScore=107.6097;InbreedingCoeff=0.4888;MQ=52.55;MQ0=14;MQRankSum=-1.803;QD=2.73;ReadPosRankSum=-1.233;VQSLOD=1.5011;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:34,0:32:3.90:73,4,0	1/1:8,0:7:3.01:53,3,0	0/0:17,0:5:1.55:0,2,4	./.	1/1:12,4:17:3.01:68,3,0	0/0:24,0:24:5.80:0,6,72	1/1:15,0:14:3.22:13,3,0	1/1:12,0:12:1.25:3,1,0	1/1:14,0:14:6.02:104,6,0	0/0:18,0:18:11.07:0,11,165	./.	0/0:17,0:17:14.99:0,15,149	1/1:9,0:9:3.90:55,4,0	0/0:6,0:6:3.01:0,3,46	0/0:17,0:17:21.06:0,21,304	0/0:12,0:11:3:0,3,46	1/1:27,0:27:2.40:68,2,0	1/1:29,0:28:3.90:72,4,0	0/0:20,0:19:5.89:0,6,72	0/0:13,0:13:3.01:0,3,46	0/0:28,0:27:1.78:0,2,11	1/1:9,0:9:3.01:42,3,0	1/1:18,0:17:2.96:20,3,0	1/1:29,0:29:11.61:222,12,0	0/1:14,0:14:0:0,0,0	0/0:22,0:22:3.94:0,4,36	0/0:17,0:16:6.02:0,6,93	0/0:14,0:14:11.81:0,12,148
chr10	63307195	.	T	TGTGG	919.36	PASS	AB=1.000;AC=14;AF=0.250;AN=56;BaseQRankSum=6.604;DP=418;FS=32.844;HRun=0;HaplotypeScore=95.7659;InbreedingCoeff=0.3273;MQ=55.11;MQ0=13;MQRankSum=-4.614;QD=5.82;ReadPosRankSum=-1.870;VQSLOD=-0.1613;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:31:2.55:0,3,314	0/1:7,0:6:51.82:81,0,52	0/0:16,0:7:13.98:0,14,143	0/0:21,0:9:23.98:0,24,215	0/1:13,0:13:22.44:22,0,123	0/0:18,0:17:36.88:0,37,364	0/0:16,0:15:29.61:0,30,240	0/1:9,0:9:58.57:59,0,135	0/1:13,0:13:34.85:102,0,35	0/0:14,0:14:38.74:0,39,466	0/0:5,0:5:5.99:0,6,50	0/0:15,0:15:21.74:0,22,349	1/1:5,0:8:6.45:85,6,0	0/0:4,0:4:12:0,12,134	0/0:15,0:15:39.03:0,39,543	0/0:9,0:8:17.83:0,18,168	0/1:26,0:26:76.51:77,0,255	0/1:22,0:22:99:129,0,255	0/0:11,0:10:23.84:0,24,231	0/0:10,0:10:17.85:0,18,184	0/0:29,0:28:62.43:0,62,496	1/1:11,0:11:12.01:122,12,0	1/1:14,0:13:8.69:95,9,0	1/1:5,25:35:11.61:315,12,0	0/0:10,0:10:14.85:0,15,127	0/0:13,0:13:35.12:0,35,329	0/0:13,0:13:38.63:0,39,363	0/0:9,0:9:20.98:0,21,266
chr10	63309345	.	A	AGT	2557.35	PASS	AB=0.783;AC=23;AF=0.442;AN=52;BaseQRankSum=-6.355;DP=531;FS=0.606;HRun=0;HaplotypeScore=88.0666;InbreedingCoeff=0.0892;MQ=60.15;MQ0=6;MQRankSum=1.832;QD=7.35;ReadPosRankSum=-0.317;VQSLOD=3.0348;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:9.77:0,10,45	0/0:5,0:7:2.57:0,3,14	./.	./.	1/1:27,0:27:5.59:28,6,0	1/1:10,10:19:10.20:165,10,0	1/1:7,5:11:9.03:137,9,0	0/1:21,0:31:2.30:30,0,2	0/0:3,0:16:8.52:0,9,42	1/1:15,11:25:39.08:519,39,0	0/1:8,8:16:8.24:40,0,8	0/1:11,10:21:90.67:159,0,91	0/1:15,0:15:6.49:17,0,6	1/1:10,8:17:6.49:93,6,0	0/1:9,7:16:52.12:122,0,52	0/1:6,3:9:43.49:239,0,43	0/0:6,0:23:28.41:0,28,139	0/0:4,0:20:22.73:0,23,112	1/1:12,8:21:21.93:299,22,0	0/1:21,9:31:72.34:251,0,72	0/1:11,15:27:49.51:165,0,50	0/0:18,0:18:4.95:0,5,25	0/1:11,0:11:8.18:8,0,8	0/0:12,0:11:2.29:0,2,6	0/1:13,12:28:85.97:327,0,86	0/0:19,0:23:40.81:0,41,384	0/1:13,4:18:21.69:125,0,22	0/0:18,0:19:32.66:0,33,329
chr10	63309364	.	GTGTGTGTGTGTGTC	G	1297.82	PASS	AB=0.675;AC=10;AF=0.179;AN=56;BaseQRankSum=4.336;DP=552;FS=5.116;HRun=0;HaplotypeScore=174.6835;InbreedingCoeff=0.5231;MQ=54.59;MQ0=11;MQRankSum=-0.946;QD=10.22;ReadPosRankSum=0.305;VQSLOD=2.5503;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:6,24:30:12.04:487,12,0	0/0:9,0:9:11.99:0,12,289	0/1:10,0:2:0.89:1,0,13	0/0:17,0:5:8.56:0,9,56	1/1:8,19:27:6:180,6,0	0/0:19,0:18:22.89:0,23,1144	0/0:17,0:15:30.06:0,30,1240	0/0:34,0:34:14.66:0,15,785	0/0:17,0:16:18.03:0,18,389	0/0:21,0:20:48.97:0,49,1786	0/0:15,0:15:12.02:0,12,531	0/0:19,0:19:19.83:0,20,1510	0/1:5,12:17:30.37:274,0,30	0/0:20,0:19:20.17:0,20,771	0/0:15,0:15:24.07:0,24,1334	0/0:9,0:9:24.07:0,24,1185	0/0:25,0:25:45.08:0,45,1362	0/0:23,0:23:42.11:0,42,1311	0/0:18,0:17:33.09:0,33,1182	0/0:27,0:27:42.57:0,43,1930	0/0:33,0:31:36.04:0,36,1773	0/1:4,11:15:4.30:139,0,4	0/1:2,13:15:14.91:214,0,15	1/1:13,0:12:12:151,12,0	0/0:30,0:29:57.07:0,57,2830	0/0:25,0:25:44.29:0,44,2504	0/0:10,0:10:18.03:0,18,726	0/0:22,0:22:54.11:0,54,2082
chr10	63310162	.	G	GT	3606.30	PASS	AB=0.744;AC=34;AF=0.607;AN=56;BaseQRankSum=-1.030;DP=605;FS=3.038;HRun=15;HaplotypeScore=90.8888;InbreedingCoeff=0.3311;MQ=70.42;MQ0=0;MQRankSum=-1.053;QD=7.67;ReadPosRankSum=-5.413;VQSLOD=1.3678;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:15,31:46:1.84:194,0,2	0/0:4,0:5:13.81:0,14,78	0/1:19,0:12:24.62:25,0,48	0/0:12,0:10:6.18:0,6,32	1/1:7,14:22:6.65:218,7,0	1/1:6,13:21:26.72:206,27,0	0/1:8,9:17:6.03:64,0,6	0/1:26,2:31:72.38:72,0,135	1/1:15,0:16:29.88:149,30,0	1/1:6,16:23:29.71:322,30,0	1/1:12,13:26:27.73:229,28,0	1/1:6,7:14:2.95:130,3,0	0/0:15,4:19:7.11:0,7,154	1/1:4,18:22:20.81:265,21,0	0/1:3,7:10:2.14:87,0,2	0/1:4,14:17:19.31:166,0,19	0/1:27,2:30:46.41:46,0,172	0/0:23,2:27:12.32:0,12,279	1/1:10,13:23:21.82:260,22,0	1/1:6,13:20:15.91:203,16,0	1/1:9,1:17:3.78:17,4,0	0/0:18,1:19:12.11:0,12,176	0/0:14,1:17:2.98:0,3,121	0/0:34,0:36:26.50:0,26,353	1/1:10,8:20:19.07:143,19,0	1/1:5,10:16:35.54:260,36,0	0/1:12,11:23:30.25:90,0,30	1/1:22,13:36:10.42:460,10,0
chr10	63310537	.	TGGTCCCCAGCTCC	T	140.02	PASS	AB=1.000;AC=3;AF=0.065;AN=46;BaseQRankSum=0.702;DP=425;FS=6.163;HRun=0;HaplotypeScore=152.1146;InbreedingCoeff=0.4029;MQ=60.25;MQ0=22;MQRankSum=-2.185;QD=3.18;ReadPosRankSum=-1.470;VQSLOD=1.7581;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:32.83:0,33,254	./.	0/1:36,0:14:0:0,0,0	./.	0/0:6,0:6:3:0,3,25	0/0:16,0:16:14.99:0,15,128	0/0:26,0:25:20.86:0,21,164	./.	1/1:3,5:8:6.02:218,6,0	0/0:18,0:18:26.92:0,27,232	0/0:9,0:9:6:0,6,54	0/0:12,0:11:8.94:0,9,70	0/0:12,0:12:18.03:0,18,594	0/0:16,0:15:17.97:0,18,151	0/0:10,0:10:3:0,3,27	0/0:8,0:8:12:0,12,104	./.	0/0:16,0:14:0.74:0,1,1	0/0:16,0:18:5.79:0,6,38	0/0:9,0:9:5.87:0,6,41	0/0:24,0:24:20.95:0,21,173	0/0:14,0:14:15.01:0,15,443	0/0:4,0:4:3.01:0,3,50	0/0:19,0:18:21.04:0,21,986	0/0:11,0:9:5.93:0,6,41	0/0:9,0:9:8.97:0,9,75	0/0:16,0:16:20.96:0,21,173	./.
chr10	63310629	.	G	GGGAA	92.02	PASS	AB=0.963;AC=15;AF=0.278;AN=54;BaseQRankSum=4.158;DP=304;FS=12.079;HRun=0;HaplotypeScore=61.7401;InbreedingCoeff=0.4655;MQ=74.46;MQ0=1;MQRankSum=-1.718;QD=0.84;ReadPosRankSum=-0.127;VQSLOD=0.4209;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,16:19:3.01:64,3,0	1/1:3,0:3:1.55:4,2,0	0/0:16,0:10:24.53:0,25,308	0/1:15,0:9:4.57:5,0,203	./.	0/0:15,0:15:39.02:0,39,506	0/0:15,0:15:21.07:0,21,281	0/1:14,0:16:27.93:28,0,37	1/1:4,0:5:8.40:49,8,0	0/0:12,0:12:23.95:0,24,281	0/0:10,0:10:13.21:0,13,278	0/0:7,0:7:17.85:0,18,161	1/1:8,0:9:2.60:10,3,0	0/0:15,0:15:27.09:0,27,367	0/0:7,0:7:18.03:0,18,223	0/0:7,0:7:18.03:0,18,233	0/1:16,0:16:58.31:58,0,62	1/1:1,0:15:0.94:2,1,0	0/0:15,0:15:35.98:0,36,475	0/0:9,0:9:21.43:0,21,231	0/0:16,0:16:29.96:0,30,376	0/0:2,0:2:0:0,0,0	0/0:3,0:3:0.47:0,0,1	1/1:11,0:11:0.46:2,0,0	0/0:8,0:8:17.06:0,17,234	0/0:9,0:9:20.98:0,21,270	0/0:15,0:15:24.06:0,24,304	0/0:14,0:14:33.02:0,33,417
chr10	63310630	.	A	AA	830.90	PASS	AB=1.000;AC=22;AF=0.407;AN=54;BaseQRankSum=-0.855;DP=308;FS=2.311;HRun=0;HaplotypeScore=42.9041;InbreedingCoeff=0.7037;MQ=75.74;MQ0=0;MQRankSum=-2.626;QD=6.70;ReadPosRankSum=-0.390;VQSLOD=3.0054;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:19:2.65:14,3,0	1/1:3,0:3:6:51,6,0	0/0:15,0:11:23.21:0,23,182	0/1:13,0:9:1.52:2,0,115	./.	0/0:15,0:15:34.96:0,35,278	0/0:16,0:16:20.94:0,21,174	1/1:16,0:16:7.90:290,8,0	1/1:5,0:5:11.96:96,12,0	0/0:12,0:12:20.91:0,21,184	0/1:10,0:10:4.10:4,0,137	0/0:7,0:7:10.82:0,11,79	1/1:3,4:8:3.01:35,3,0	0/0:14,0:14:25.24:0,25,190	0/0:8,0:8:15.33:0,15,114	0/0:7,0:7:16.76:0,17,138	1/1:16,0:16:23.42:326,23,0	1/1:15,0:15:2.93:20,3,0	0/0:15,0:15:33.02:0,33,321	0/0:10,0:10:15.69:0,16,111	0/0:17,0:17:25.97:0,26,222	1/1:1,0:1:3:26,3,0	1/1:2,1:4:2.99:25,3,0	1/1:11,0:12:14.98:124,15,0	0/0:8,0:8:15.62:0,16,134	0/0:10,0:10:12.77:0,13,156	0/0:15,0:15:23.88:0,24,185	0/0:14,0:14:30.34:0,30,247
chr10	63312302	.	ACACTCTCTCTCTCTCTCTCTCTCT	A	1136.05	PASS	AB=0.958;AC=6;AF=0.107;AN=56;BaseQRankSum=0.028;DP=548;FS=9.702;HRun=0;HaplotypeScore=302.4260;InbreedingCoeff=0.6135;MQ=76.03;MQ0=11;MQRankSum=-2.568;QD=18.32;ReadPosRankSum=-3.157;VQSLOD=0.3177;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:68.84:0,69,1675	0/0:1,10:10:0:0,0,0	0/0:40,0:28:64.40:0,64,962	0/0:50,0:26:46.87:0,47,1247	0/0:14,0:14:32.81:0,33,500	0/0:7,0:7:21:0,21,360	0/0:25,0:24:58.75:0,59,971	1/1:23,0:20:55.95:537,56,0	0/0:14,0:14:39:0,39,1151	0/0:20,0:20:59.66:0,60,1578	0/0:15,0:15:31.34:0,31,501	0/0:21,0:21:57.12:0,57,2713	0/0:19,0:19:44.83:0,45,706	0/0:21,0:20:60.05:0,60,1650	0/0:26,0:26:42.76:0,43,789	0/0:29,0:29:54.05:0,54,1625	0/1:10,1:11:99:174,0,220	1/1:11,0:14:32.89:528,33,0	0/0:17,0:16:47.85:0,48,993	0/0:14,0:14:38.78:0,39,1123	0/0:28,0:27:65.87:0,66,1731	0/1:14,0:13:33.88:34,0,111	0/0:13,0:13:29.92:0,30,399	0/0:20,0:20:26.83:0,27,211	0/0:12,0:12:24.05:0,24,821	0/0:17,0:16:48.13:0,48,2197	0/0:17,0:17:48.01:0,48,1573	0/0:7,0:7:20.95:0,21,439
chr10	63312304	.	ACTCTCTCT	A	2406.49	PASS	AB=0.921;AC=32;AF=0.640;AN=50;BaseQRankSum=1.536;DP=549;FS=4.933;HRun=0;HaplotypeScore=146.5894;InbreedingCoeff=0.3124;MQ=73.12;MQ0=15;MQRankSum=0.849;QD=7.36;ReadPosRankSum=2.880;VQSLOD=2.4907;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:9.03:0,9,293	0/0:12,0:10:0:0,0,0	./.	0/0:49,0:25:0.47:0,0,1	0/0:14,0:14:6.02:0,6,157	1/1:7,0:7:3.01:74,3,0	1/1:22,1:24:0.47:1,0,0	./.	1/1:10,1:14:18.05:351,18,0	1/1:13,7:20:18.06:344,18,0	0/0:12,0:14:2.98:0,3,21	0/0:19,0:21:23.42:0,23,371	1/1:12,0:18:6.02:112,6,0	1/1:20,0:19:18.05:330,18,0	1/1:14,8:25:6.95:95,7,0	0/1:15,0:28:24.21:45,0,24	0/0:10,0:10:3.01:0,3,61	1/1:12,0:12:9.03:182,9,0	1/1:15,3:17:8.65:171,9,0	1/1:15,0:14:8.85:109,9,0	0/1:30,0:28:5.55:255,0,6	1/1:8,0:13:3.01:56,3,0	1/1:10,0:13:3.01:56,3,0	1/1:19,0:20:2.97:20,3,0	1/1:13,0:13:12.04:241,12,0	0/1:19,0:18:39.52:40,0,183	0/1:15,0:15:15.91:72,0,16	./.
chr10	63313747	.	CT	C	3513.33	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=10.994;DP=772;FS=2.378;HRun=2;HaplotypeScore=76.8399;InbreedingCoeff=0.9977;MQ=83.77;MQ0=0;MQRankSum=-2.441;QD=35.85;ReadPosRankSum=1.245;VQSLOD=4.2567;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,150,2184	1/1:0,8:8:21.07:273,21,0	0/0:22,0:22:63.65:0,64,851	0/0:29,0:29:77.40:0,77,952	0/0:28,0:28:81.26:0,81,1193	0/0:23,0:23:69.23:0,69,1034	0/0:28,0:28:78.20:0,78,1108	1/1:0,27:28:81.21:984,81,0	0/0:29,0:29:84.25:0,84,1215	0/0:26,0:26:75.25:0,75,1107	0/0:18,0:18:51.13:0,51,686	0/0:48,0:48:99:0,135,2000	0/0:22,0:22:66.22:0,66,978	0/0:28,0:28:84.27:0,84,1237	0/0:33,0:33:96.30:0,96,1396	0/0:41,0:41:99:0,123,1744	1/1:0,38:38:99:1362,105,0	1/1:0,24:24:69.22:895,69,0	0/0:18,0:18:54.17:0,54,784	0/0:30,0:30:90.29:0,90,1328	0/0:29,0:29:87.26:0,87,1260	0/0:27,0:27:78.25:0,78,1147	0/0:24,0:24:72.22:0,72,1030	0/0:26,0:26:78.21:0,78,1124	0/0:14,0:14:42.13:0,42,609	0/0:39,0:39:99:0,117,1663	0/0:35,0:34:99:0,102,1504	0/0:7,0:7:21.04:0,21,275
chr10	63314467	.	CG	C	691.77	PASS	AB=0.812;AC=21;AF=0.404;AN=52;BaseQRankSum=-0.522;DP=313;FS=31.913;HRun=12;HaplotypeScore=54.8865;InbreedingCoeff=0.4396;MQ=73.59;MQ0=0;MQRankSum=0.722;QD=3.57;ReadPosRankSum=3.808;VQSLOD=-0.4052;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:13,10:24:13.87:99,14,0	0/0:4,0:4:3.01:0,3,30	0/0:11,0:11:16.01:0,16,104	0/0:5,0:5:5.97:0,6,47	0/0:6,0:6:1.25:0,1,3	0/1:7,2:8:0:0,0,0	1/1:13,12:30:6.95:117,7,0	0/0:8,0:12:8.51:0,9,49	1/1:4,0:7:11.73:46,12,0	0/0:6,0:6:0:0,0,0	0/0:6,2:8:0.47:0,0,1	0/1:12,2:16:10.68:52,0,11	0/0:12,0:12:14.73:0,15,102	0/1:15,6:21:13.56:79,0,14	0/1:8,2:11:6.35:74,0,6	1/1:8,5:13:9.04:135,9,0	0/1:19,3:22:1.12:1,0,204	0/0:14,1:15:5.12:0,5,195	0/0:12,0:13:3.16:0,3,67	./.	1/1:12,6:18:8.64:69,9,0	0/0:5,0:5:6:0,6,56	0/0:8,0:8:11.98:0,12,107	0/0:7,0:7:9:0,9,83	1/1:6,1:7:2.93:23,3,0	./.	1/1:9,2:11:11.84:86,12,0	1/1:1,4:5:8.94:70,9,0
chr10	63314725	.	G	GT	1882.95	PASS	AB=0.917;AC=13;AF=0.232;AN=56;BaseQRankSum=-8.700;DP=405;FS=4.024;HRun=9;HaplotypeScore=39.4575;InbreedingCoeff=0.8770;MQ=74.01;MQ0=0;MQRankSum=-0.165;QD=20.47;ReadPosRankSum=0.224;VQSLOD=3.7380;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,24:26:60.03:646,60,0	0/0:7,0:8:23.03:0,23,188	0/0:11,0:11:20.15:0,20,192	0/0:5,0:4:8.79:0,9,65	1/1:3,24:27:65.21:703,65,0	0/0:12,0:13:32.02:0,32,266	0/0:11,0:11:32.99:0,33,287	0/0:38,0:39:82.94:0,83,697	0/0:9,0:9:26.99:0,27,234	0/0:18,0:18:44.96:0,45,384	0/0:12,0:12:35.67:0,36,297	0/0:12,0:12:35.99:0,36,312	1/1:2,7:9:21.06:232,21,0	0/0:8,0:8:23.98:0,24,204	0/0:10,0:10:29.98:0,30,256	0/0:8,0:8:14.97:0,15,126	0/0:20,0:20:56.96:0,57,490	0/0:16,0:16:35.98:0,36,312	0/0:25,0:25:56.97:0,57,493	0/1:10,1:11:6.21:6,0,177	0/0:13,0:13:32.98:0,33,284	1/1:0,9:10:20.89:213,21,0	1/1:0,6:6:18.05:199,18,0	1/1:0,3:3:6.02:66,6,0	0/0:20,0:20:50.98:0,51,443	0/0:16,0:16:41.99:0,42,365	0/0:28,0:28:80.97:0,81,699	0/0:11,0:11:29.99:0,30,260
chr10	63314971	.	T	TGACA	4622.05	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-8.469;DP=728;FS=25.500;HRun=0;HaplotypeScore=116.4030;InbreedingCoeff=0.9910;MQ=82.34;MQ0=0;MQRankSum=-4.176;QD=57.78;ReadPosRankSum=-0.103;VQSLOD=3.8492;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:58:99:0,166,2956	1/1:1,4:5:12.04:320,12,0	0/0:25,0:25:63.21:0,63,1083	0/0:29,0:29:84.29:0,84,1552	0/0:35,0:34:96.31:0,96,1760	0/0:24,0:24:66.22:0,66,1168	0/0:23,0:23:63.21:0,63,1156	1/1:15,17:33:78.25:1903,78,0	0/0:30,0:30:84.29:0,84,1520	0/0:26,0:26:72.22:0,72,1281	0/0:19,0:19:57.20:0,57,1048	0/0:28,0:28:78.26:0,78,1388	0/0:35,0:35:99:0,99,1756	0/0:19,0:19:51.17:0,51,916	0/0:34,0:34:90.30:0,90,1607	0/0:23,0:23:66.22:0,66,1167	1/1:2,19:22:45.15:1200,45,0	1/1:1,17:20:45.15:1199,45,0	0/0:19,0:19:57.20:0,57,1045	0/0:20,0:20:57.20:0,57,1049	0/0:64,0:64:99:0,184,3364	0/0:12,0:12:36.11:0,36,622	0/0:11,0:11:27.09:0,27,493	0/0:25,0:25:69.22:0,69,1223	0/0:20,0:20:60.21:0,60,1120	0/0:25,0:25:69.23:0,69,1228	0/0:28,0:28:72.21:0,72,1308	0/0:16,0:16:48.16:0,48,822
chr10	63315243	.	TA	T	958.55	PASS	AB=0.773;AC=16;AF=0.286;AN=56;BaseQRankSum=4.001;DP=520;FS=2.791;HRun=15;HaplotypeScore=70.6021;InbreedingCoeff=0.6061;MQ=66.21;MQ0=2;MQRankSum=1.649;QD=5.81;ReadPosRankSum=1.905;VQSLOD=2.8439;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,22:32:22.93:268,23,0	0/1:3,2:5:24.02:24,0,41	0/0:17,0:12:4.37:0,4,72	0/1:18,1:10:8.38:8,0,26	1/1:6,13:19:8.03:167,8,0	0/0:14,0:14:29.82:0,30,234	0/0:9,0:9:17.99:0,18,155	0/0:17,0:17:23.74:0,24,196	1/1:3,12:15:16.40:192,16,0	0/0:21,1:22:19.73:0,20,297	0/0:23,0:23:52.38:0,52,429	0/0:22,0:24:47.61:0,48,395	1/1:6,5:13:21.04:114,21,0	0/0:12,0:12:26.76:0,27,212	0/0:26,2:29:21.14:0,21,406	0/0:24,2:27:12.26:0,12,337	0/0:23,1:24:40.26:0,40,451	0/0:17,2:16:22.65:0,23,312	0/0:15,0:15:23.06:0,23,245	0/1:19,3:22:18.40:18,0,164	0/0:14,0:14:23.96:0,24,202	1/1:4,7:12:16.72:102,17,0	1/1:2,8:10:20.54:130,21,0	0/1:3,14:17:22.47:124,0,22	0/0:30,0:30:65.94:0,66,566	0/0:18,0:21:38.49:0,38,298	0/0:21,2:22:12.27:0,12,332	0/0:11,2:13:13.68:0,14,237
chr10	63316926	.	CTAAA	C	4654.69	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=11.307;DP=643;FS=4.653;HRun=0;HaplotypeScore=105.2646;InbreedingCoeff=0.9925;MQ=87.79;MQ0=0;MQRankSum=-6.537;QD=47.50;ReadPosRankSum=0.732;VQSLOD=5.4412;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,150,3997	1/1:0,6:6:12.04:227,12,0	0/0:23,0:23:66.19:0,66,1645	0/0:23,0:23:64.02:0,64,1377	0/0:26,0:26:72.25:0,72,1944	0/0:25,0:25:75.26:0,75,2023	0/0:22,0:22:66.23:0,66,1804	1/1:2,31:33:90.27:1644,90,0	1/1:0,21:21:60.21:1157,60,0	0/0:30,0:30:90.30:0,90,2342	0/0:23,0:23:66.22:0,66,1719	0/0:23,0:23:66.23:0,66,1767	0/0:13,0:13:36.11:0,36,890	0/0:15,0:15:42.13:0,42,1039	0/0:23,0:23:63.22:0,63,1726	0/0:25,0:25:75.26:0,75,2051	1/1:1,13:14:26.69:523,27,0	1/1:1,23:24:57.20:1105,57,0	0/0:26,0:26:78.27:0,78,2123	0/0:28,0:28:84.29:0,84,2271	0/0:38,0:38:99:0,108,2759	0/0:23,0:23:69.22:0,69,1727	0/0:17,0:17:48.16:0,48,1310	0/0:19,0:19:57.16:0,57,1391	0/0:12,0:12:36.12:0,36,958	0/0:20,0:20:60.21:0,60,1601	0/0:27,0:27:80.99:0,81,2003	0/0:13,0:13:39.13:0,39,1069
chr10	63317600	.	A	AAC	4710.82	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-13.036;DP=742;FS=1.860;HRun=0;HaplotypeScore=86.9902;InbreedingCoeff=0.9998;MQ=83.70;MQ0=0;MQRankSum=-1.728;QD=44.44;ReadPosRankSum=0.250;VQSLOD=6.1574;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,105,1442	1/1:0,13:13:32.92:585,33,0	0/0:27,0:27:72.15:0,72,897	0/0:22,0:22:65.89:0,66,873	0/0:21,0:21:57.19:0,57,782	0/0:20,0:20:57.17:0,57,764	0/0:23,0:23:66.21:0,66,891	1/1:4,30:34:96.28:1629,96,0	0/0:33,0:33:93.28:0,93,1244	0/0:32,0:32:90.30:0,90,1236	0/0:12,0:12:33.10:0,33,437	0/0:44,0:44:99:0,120,1599	0/0:25,0:25:60.18:0,60,806	0/0:25,0:25:72.23:0,72,973	0/0:36,0:36:99:0,108,1465	0/0:29,0:29:84.28:0,84,1153	1/1:3,35:40:99:1807,102,0	1/1:2,16:18:39.13:690,39,0	0/0:24,0:24:63.19:0,63,837	0/0:20,0:20:54.18:0,54,742	0/0:44,0:44:99:0,126,1715	0/0:30,0:30:81.26:0,81,1097	0/0:14,0:14:39.12:0,39,519	0/0:26,0:26:75.20:0,75,979	0/0:25,0:25:69.21:0,69,931	0/0:30,0:30:81.24:0,81,1070	0/0:18,0:18:51.15:0,51,682	0/0:21,0:21:60.20:0,60,824
chr10	63317911	.	C	CA	918.04	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.629;DP=816;FS=0.000;HRun=2;HaplotypeScore=79.2878;InbreedingCoeff=0.9993;MQ=77.91;MQ0=0;MQRankSum=-1.194;QD=32.79;ReadPosRankSum=2.200;VQSLOD=3.7060;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:60,0:60:99:0,174,2124	0/0:14,0:14:33.09:0,33,396	0/0:23,0:23:66.18:0,66,793	0/0:27,0:27:71.24:0,71,844	0/0:20,0:20:60.16:0,60,718	0/0:17,0:17:45.11:0,45,532	0/0:30,0:30:87.25:0,87,1052	0/0:42,0:42:99:0,117,1394	1/1:3,25:28:72.20:1013,72,0	0/0:29,0:29:84.26:0,84,1041	0/0:13,0:13:33.10:0,33,408	0/0:37,0:37:99:0,105,1273	0/0:41,0:41:99:0,120,1442	0/0:30,0:30:87.23:0,87,1039	0/0:24,0:24:69.18:0,69,828	0/0:31,0:31:90.26:0,90,1091	0/0:32,0:32:96.29:0,96,1176	0/0:27,0:27:75.21:0,75,914	0/0:25,0:25:72.21:0,72,869	0/0:20,0:20:60.13:0,60,701	0/0:57,0:57:99:0,168,2043	0/0:23,0:23:63.18:0,63,767	0/0:16,0:16:39.03:0,39,455	0/0:50,0:50:99:0,150,1830	0/0:31,0:31:87.27:0,87,1078	0/0:23,0:23:63.18:0,63,758	0/0:32,0:32:96.29:0,96,1178	0/0:14,0:14:39.12:0,39,482
chr10	63319140	.	GCACACA	G	5365.01	PASS	AB=0.800;AC=30;AF=0.556;AN=54;BaseQRankSum=0.936;DP=754;FS=26.449;HRun=0;HaplotypeScore=211.0643;InbreedingCoeff=0.6713;MQ=48.00;MQ0=4;MQRankSum=-2.062;QD=10.77;ReadPosRankSum=4.302;VQSLOD=2.2310;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:29:42.10:0,42,522	0/0:7,0:8:6.02:0,6,102	0/0:17,0:3:6.02:0,6,124	./.	0/0:9,0:17:24.07:0,24,316	1/1:4,9:13:11.47:244,11,0	1/1:15,30:47:18.69:323,19,0	0/0:26,0:24:51.17:0,51,1032	0/0:5,0:22:9.03:0,9,226	1/1:13,25:39:63.13:1092,63,0	1/1:6,11:17:2.91:64,3,0	1/1:15,33:49:29.90:619,30,0	0/0:7,0:20:11.89:0,12,249	1/1:5,22:29:17.99:359,18,0	1/1:5,13:19:5.92:127,6,0	0/1:10,19:30:60.38:253,0,60	0/0:14,0:23:8.99:0,9,134	0/0:21,0:25:30.01:0,30,642	1/1:14,6:19:4.37:298,4,0	1/1:8,6:16:3.68:65,4,0	1/1:56,47:102:2.57:65,3,0	0/1:9,0:30:0:0,0,1	0/0:3,0:23:3.48:0,3,37	0/0:4,0:36:2.70:0,3,45	1/1:6,12:20:9.03:169,9,0	1/1:8,17:26:36.90:699,37,0	1/1:8,8:17:18.06:359,18,0	1/1:5,16:21:30.10:631,30,0
chr10	63319408	.	T	TG	412.56	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-1.821;DP=638;FS=11.387;HRun=7;HaplotypeScore=72.1564;InbreedingCoeff=0.9816;MQ=72.00;MQ0=3;MQRankSum=0.676;QD=24.27;ReadPosRankSum=0.130;VQSLOD=3.2174;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:38:99:0,108,1032	0/0:7,0:7:14.92:0,15,124	0/0:42,0:35:54.36:0,54,518	0/0:32,0:26:37.54:0,38,376	0/0:20,0:20:54.02:0,54,506	0/0:16,0:16:42.02:0,42,405	0/0:18,0:18:26.99:0,27,252	0/0:27,0:27:66.02:0,66,616	1/1:1,16:17:42.13:507,42,0	0/0:30,0:30:81.12:0,81,781	0/0:13,0:13:36.06:0,36,348	0/0:20,0:20:54.05:0,54,512	0/0:15,0:15:38.93:0,39,359	0/0:24,0:24:69.11:0,69,665	0/0:27,0:27:63.08:0,63,603	0/0:27,0:27:78.11:0,78,747	0/0:34,0:34:75.10:0,75,724	0/0:17,0:17:51.06:0,51,485	0/0:22,0:22:51.07:0,51,491	0/0:24,0:24:63.10:0,63,607	0/0:28,0:28:66.09:0,66,633	0/0:29,0:29:74.81:0,75,662	0/0:20,0:20:48.07:0,48,463	0/0:22,0:22:60.09:0,60,579	0/0:23,0:23:66.09:0,66,632	0/0:19,0:19:54.04:0,54,512	0/0:16,0:16:36.05:0,36,347	0/0:10,0:10:27.04:0,27,261
chr10	63319559	.	GA	G	266.22	PASS	AB=0.848;AC=7;AF=0.125;AN=56;BaseQRankSum=3.406;DP=516;FS=4.321;HRun=15;HaplotypeScore=72.7051;InbreedingCoeff=0.0726;MQ=60.06;MQ0=8;MQRankSum=3.413;QD=1.99;ReadPosRankSum=1.133;VQSLOD=-0.7384;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:15,18:38:20.48:172,0,20	0/0:6,0:7:7.24:0,7,32	0/0:28,0:6:3:0,3,26	0/1:25,2:14:7.87:8,0,26	1/1:6,10:19:10.39:161,10,0	0/0:14,0:16:29.77:0,30,233	0/0:13,1:16:9.78:0,10,219	0/0:11,0:12:24.03:0,24,119	0/0:2,0:11:5.44:0,5,74	0/0:25,1:26:25.66:0,26,331	0/0:10,1:10:10.76:0,11,80	0/1:16,1:17:7.01:7,0,197	0/0:27,1:28:27.45:0,27,308	0/0:15,1:16:7.70:0,8,182	0/0:20,2:25:8.25:0,8,328	0/0:17,1:20:5.23:0,5,271	0/0:16,0:18:9.13:0,9,58	0/0:8,0:12:17.04:0,17,86	0/1:13,2:14:33.71:34,0,103	0/0:20,0:20:17.96:0,18,148	0/0:15,1:15:4.69:0,5,153	0/0:11,1:13:11.05:0,11,204	0/0:12,0:13:4.05:0,4,172	0/0:24,1:27:49.31:0,49,485	0/0:12,0:11:21:0,21,184	0/0:17,0:17:24.72:0,25,189	0/0:11,1:15:7.86:0,8,159	0/1:14,2:17:3.54:4,0,233
chr10	63322204	.	A	AGCAG	9370.71	PASS	AB=0.731;AC=21;AF=0.375;AN=56;BaseQRankSum=-3.233;DP=806;FS=10.003;HRun=0;HaplotypeScore=179.1242;InbreedingCoeff=0.1075;MQ=56.33;MQ0=25;MQRankSum=4.269;QD=21.01;ReadPosRankSum=8.742;VQSLOD=3.0409;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:39:42.73:0,43,274	0/0:12,0:12:36.11:0,36,715	0/0:47,0:12:26.38:0,26,242	0/0:40,0:18:26.32:0,26,451	0/0:6,0:29:28.70:0,29,183	0/1:19,0:26:30.80:305,0,31	0/1:39,0:44:99:628,0,179	0/0:27,0:27:81.18:0,81,1265	0/0:26,0:26:48.79:0,49,917	0/1:13,0:21:54.94:526,0,55	0/1:2,0:16:39.20:266,0,39	0/1:22,0:33:99:422,0,159	0/1:3,0:15:21.07:21,0,67	0/1:17,0:28:99:511,0,132	0/1:19,0:29:99:341,0,153	1/1:14,0:20:1.05:465,1,0	0/0:32,0:32:93.23:0,93,1606	0/0:23,0:23:69.19:0,69,1231	1/1:1,21:23:68.96:1120,69,0	1/1:13,3:16:44.87:799,45,0	1/1:2,100:109:58.87:2313,59,0	0/0:1,0:17:8.93:0,9,65	0/0:2,0:23:7.25:0,7,57	0/0:10,0:42:22.24:0,22,146	0/1:13,0:19:19.18:496,0,19	0/1:20,0:23:96.43:96,0,177	1/1:11,6:17:51.10:1015,51,0	0/1:3,0:5:17.20:46,0,17
chr10	63322212	.	G	GAC	1414.55	PASS	AB=0.970;AC=16;AF=0.296;AN=54;BaseQRankSum=9.835;DP=815;FS=4.686;HRun=0;HaplotypeScore=192.7494;InbreedingCoeff=-0.2798;MQ=53.30;MQ0=27;MQRankSum=2.097;QD=3.02;ReadPosRankSum=11.852;VQSLOD=0.6796;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:33,9:40:95.55:96,0,171	0/0:13,0:13:36.12:0,36,516	0/0:44,0:8:12.51:0,13,167	0/0:46,0:19:24.38:0,24,429	0/0:29,0:28:5.60:0,6,85	0/1:30,0:29:35.41:35,0,197	0/1:46,0:46:81.26:81,0,381	0/0:27,0:27:78.25:0,78,1098	0/0:26,0:26:65.17:0,65,780	0/1:20,0:20:99:108,0,183	1/1:16,0:16:17.41:96,17,0	0/1:36,0:36:89.32:89,0,252	0/1:16,0:16:18.92:20,0,19	0/1:28,0:28:99:135,0,118	0/1:26,0:26:46.32:46,0,178	0/1:20,0:20:39.98:40,0,239	0/0:35,0:35:99:0,99,1372	0/0:22,0:22:63.21:0,63,899	0/0:20,0:19:13.34:0,13,350	0/0:14,0:14:6.02:0,6,211	0/1:121,0:121:32.75:33,0,250	./.	0/1:22,0:22:42.48:42,0,57	0/0:37,0:37:6:0,6,64	0/1:19,0:19:71.36:93,0,71	0/1:15,7:21:99:562,0,193	0/0:17,0:17:9.44:0,9,263	0/1:5,0:5:30.68:97,0,31
chr10	63322222	.	C	CAG	3230.05	PASS	AB=0.989;AC=19;AF=0.339;AN=56;BaseQRankSum=7.821;DP=820;FS=30.301;HRun=0;HaplotypeScore=190.6020;InbreedingCoeff=-0.0441;MQ=52.78;MQ0=26;MQRankSum=4.238;QD=6.59;ReadPosRankSum=6.325;VQSLOD=1.3128;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:40,0:38:1.99:2,0,245	0/0:13,0:13:39.13:0,39,593	0/0:50,0:10:17.68:0,18,207	0/0:47,0:15:26.51:0,27,287	0/0:27,0:26:8.61:0,9,133	0/1:32,1:32:93.92:181,0,94	0/1:42,1:43:99:369,0,403	0/0:32,0:31:90.10:0,90,1161	0/0:30,0:30:59.77:0,60,628	0/1:21,1:22:99:334,0,153	1/1:15,0:15:17.95:144,18,0	0/1:35,0:35:99:271,0,113	0/0:12,0:12:8.20:0,8,102	0/1:25,0:25:5.79:306,0,6	1/1:25,1:26:9.58:320,10,0	0/1:22,1:23:99:243,0,129	0/0:32,0:32:96.29:0,96,1410	0/0:24,0:24:68.88:0,69,905	0/1:26,0:23:99:157,0,264	0/1:15,0:14:16.73:174,0,17	0/1:122,0:121:99:286,0,518	0/0:15,0:15:9.01:0,9,113	0/0:16,0:16:1.80:0,2,82	0/0:31,0:31:18.06:0,18,263	1/1:18,1:19:36.84:278,37,0	0/1:23,0:22:99:142,0,286	0/1:18,0:18:49.91:179,0,50	0/1:5,0:5:15.82:16,0,36
chr10	63322262	.	TAC	T	1743.58	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=3.670;DP=828;FS=1.128;HRun=0;HaplotypeScore=242.1323;InbreedingCoeff=0.9759;MQ=54.97;MQ0=7;MQRankSum=2.604;QD=18.95;ReadPosRankSum=-0.215;VQSLOD=3.4731;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,30:33:41.80:547,42,0	0/0:13,0:13:35.71:0,36,571	0/0:46,0:18:35.98:0,36,685	0/0:56,0:24:14.23:0,14,604	1/1:8,12:19:29.77:389,30,0	0/0:35,0:34:23.30:0,23,392	0/0:49,0:49:71.25:0,71,1171	0/0:35,0:35:93.30:0,93,1513	0/0:24,0:24:57.13:0,57,922	0/0:25,0:25:72.23:0,72,1179	0/0:16,0:16:17.74:0,18,197	0/0:41,0:41:37.72:0,38,609	0/0:20,0:20:42.12:0,42,686	0/0:19,0:19:17.94:0,18,231	0/0:41,0:41:23.95:0,24,377	0/0:30,0:30:44.90:0,45,727	0/0:25,0:25:75.26:0,75,1259	0/0:25,0:25:69.17:0,69,1081	0/0:22,0:22:51.16:0,51,832	0/0:16,0:16:16.85:0,17,276	0/0:101,0:100:99:0,102,1631	0/0:15,0:15:27.09:0,27,455	0/0:17,0:17:27.09:0,27,459	0/0:34,0:34:57.19:0,57,949	0/0:15,0:15:18.06:0,18,300	1/1:7,24:30:18.12:770,18,0	0/0:14,0:14:27.09:0,27,439	1/1:1,5:6:15.05:195,15,0
chr10	63322295	.	ACACACATG	A	9248.02	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=8.643;DP=842;FS=20.521;HRun=0;HaplotypeScore=289.3180;InbreedingCoeff=0.9795;MQ=56.94;MQ0=6;MQRankSum=-14.089;QD=24.40;ReadPosRankSum=-8.484;VQSLOD=1.4461;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:44:76.26:0,76,3178	0/0:13,0:13:27.09:0,27,1056	0/0:42,0:26:29.49:0,29,874	0/0:57,0:38:55.80:0,56,1704	0/0:18,0:18:36.12:0,36,1460	1/1:8,20:27:25.97:478,26,0	1/1:9,39:48:51.97:1082,52,0	0/0:37,0:37:66.21:0,66,2188	0/0:32,0:32:80.51:0,81,3304	1/1:5,19:24:63.20:1512,63,0	1/1:1,8:9:9.50:150,9,0	1/1:8,32:40:49.22:1057,49,0	0/0:32,0:32:79.51:0,80,3284	1/1:2,19:21:36.49:776,36,0	1/1:3,39:42:48.29:920,48,0	1/1:6,23:29:60.65:1248,61,0	0/0:37,0:37:84.29:0,84,3419	0/0:26,0:26:78.27:0,78,3075	1/1:14,3:17:30.09:597,30,0	1/1:3,15:18:8.79:141,9,0	1/1:50,24:73:22.43:323,22,0	0/0:20,0:20:51.16:0,51,1955	0/0:16,0:16:24.08:0,24,922	0/0:44,0:44:96.33:0,96,3805	1/1:1,13:14:15.99:276,16,0	0/0:33,1:33:17.77:0,18,3686	1/1:4,11:15:26.61:687,27,0	0/0:8,0:8:21.07:0,21,881
chr10	63322716	.	A	ACAGAACAGGG	27656.19	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-6.478;DP=894;FS=5.367;HRun=0;HaplotypeScore=253.7727;InbreedingCoeff=0.9982;MQ=84.08;MQ0=0;MQRankSum=-20.686;QD=113.35;ReadPosRankSum=0.359;VQSLOD=4.5763;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,32:50:99:5229,117,0	0/0:11,0:11:33.10:0,33,995	0/0:38,0:38:99:0,105,2762	0/0:24,0:24:63.03:0,63,1622	1/1:5,15:21:53.25:2281,53,0	0/0:17,0:17:48.15:0,48,1444	0/0:46,0:46:99:0,132,4087	0/0:31,0:31:75.17:0,75,1773	1/1:12,23:36:99:5008,102,0	0/0:37,0:37:99:0,99,3121	0/0:20,0:20:60.16:0,60,1892	0/0:41,0:41:99:0,120,3652	1/1:7,19:31:78.27:4000,78,0	0/0:43,0:43:99:0,126,4077	0/0:44,0:44:99:0,129,4124	0/0:45,0:45:99:0,126,4016	0/0:37,0:37:99:0,105,3333	0/0:47,0:47:99:0,138,4320	0/0:36,0:36:94.86:0,95,2723	0/0:23,0:23:63.22:0,63,2047	0/0:63,0:63:99:0,178,5636	1/1:12,9:21:48.12:1890,48,0	1/1:6,7:15:30.10:1327,30,0	1/1:12,8:23:39.08:1856,39,0	0/0:21,0:21:63.20:0,63,1988	1/1:15,25:40:23.23:5472,23,0	0/0:26,0:25:78.27:0,78,2514	1/1:5,1:7:18.06:594,18,0
chr10	63323440	.	ATGTG	A	6867.72	PASS	AC=30;AF=0.600;AN=50;BaseQRankSum=2.195;DP=766;FS=0.000;HRun=0;HaplotypeScore=157.3351;InbreedingCoeff=0.9007;MQ=67.25;MQ0=8;MQRankSum=2.492;QD=15.82;ReadPosRankSum=3.373;VQSLOD=4.2998;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:23,18:43:55.06:833,55,0	0/0:15,0:17:23.71:0,24,450	./.	./.	1/1:8,12:20:16.91:514,17,0	1/1:7,12:20:1.67:464,2,0	1/1:9,9:19:27.08:386,27,0	0/0:29,0:26:18.04:0,18,274	./.	1/1:19,7:29:20.58:412,21,0	1/1:14,3:22:24.03:354,24,0	1/1:13,15:28:27.09:425,27,0	0/0:3,0:26:27.23:0,27,467	1/1:19,9:28:15.05:236,15,0	1/1:19,18:37:33.11:508,33,0	1/1:12,18:32:48.62:718,49,0	0/0:30,0:30:57.17:0,57,1282	0/0:29,0:30:50.87:0,51,1007	1/1:19,3:19:5.51:69,6,0	1/1:13,14:28:6.13:338,6,0	1/1:29,15:43:27.09:425,27,0	0/0:6,0:24:20.84:0,21,384	0/0:2,0:19:6.02:0,6,99	0/0:3,0:31:15.05:0,15,259	1/1:12,13:26:24.07:359,24,0	0/0:25,0:24:42.14:0,42,755	1/1:17,15:35:43.30:828,43,0	0/0:3,0:15:12.93:0,13,213
chr10	63324521	.	G	GT	10407.20	PASS	AB=0.921;AC=35;AF=0.625;AN=56;BaseQRankSum=-8.956;DP=615;FS=0.000;HRun=8;HaplotypeScore=116.3187;InbreedingCoeff=0.9213;MQ=71.54;MQ0=1;MQRankSum=-3.577;QD=25.08;ReadPosRankSum=-0.414;VQSLOD=3.7165;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:48:0,48,433	1/1:1,8:9:21.06:242,21,0	0/0:27,0:19:25.14:0,25,244	0/0:23,0:20:21.95:0,22,238	0/0:31,0:31:72.01:0,72,654	1/1:5,22:27:63.14:709,63,0	1/1:2,13:15:27.08:311,27,0	1/1:8,23:30:69.16:765,69,0	0/0:22,0:22:57.02:0,57,518	1/1:1,21:22:66.15:748,66,0	1/1:4,21:25:63.14:709,63,0	1/1:5,17:22:32.67:609,33,0	0/0:14,0:14:27.01:0,27,247	1/1:6,13:19:36.04:399,36,0	1/1:3,20:23:57.17:658,57,0	1/1:1,12:13:33.10:381,33,0	1/1:3,20:23:57.17:658,57,0	1/1:0,25:25:72.21:831,72,0	1/1:5,16:21:45.08:489,45,0	1/1:5,20:25:60.08:657,60,0	1/1:2,16:18:42.12:485,42,0	0/0:19,0:19:54.03:0,54,493	0/0:18,0:18:41.94:0,42,384	0/0:9,0:9:24.01:0,24,220	1/1:4,27:32:84.25:963,84,0	0/1:32,3:35:45.19:45,0,654	1/1:8,22:29:23.30:750,23,0	0/0:15,0:15:26.96:0,27,238
chr10	63324566	.	C	CTGTA	11816.55	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=3.749;DP=724;FS=1.429;HRun=0;HaplotypeScore=264.5754;InbreedingCoeff=0.9580;MQ=53.51;MQ0=5;MQRankSum=-6.019;QD=20.91;ReadPosRankSum=2.666;VQSLOD=3.9937;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,13:26:24.08:588,24,0	0/0:9,0:9:24.08:0,24,396	0/0:23,0:17:24.08:0,24,393	0/0:22,0:17:29.86:0,30,372	1/1:9,17:26:33.11:803,33,0	1/1:23,0:23:24.03:260,24,0	1/1:19,0:19:14.50:129,15,0	0/0:26,0:27:52.31:0,52,930	0/0:29,0:29:75.24:0,75,1211	1/1:35,0:35:90.17:885,90,0	1/1:27,0:28:5.49:66,5,0	1/1:23,0:24:18.06:252,18,0	1/1:7,14:22:39.60:917,40,0	1/1:27,0:27:20.53:238,21,0	1/1:25,0:28:27.04:303,27,0	1/1:19,0:23:23.94:320,24,0	0/0:23,0:23:39.13:0,39,637	0/0:26,0:26:38.98:0,39,868	1/1:21,0:19:32.94:349,33,0	1/1:37,0:40:29.91:376,30,0	1/1:14,0:14:10.83:111,11,0	1/1:4,21:25:54.19:1324,54,0	1/1:11,27:38:54.19:1324,54,0	1/1:4,14:19:39.13:956,39,0	1/1:38,0:40:33.10:450,33,0	1/1:15,23:39:19.61:1410,20,0	1/1:34,0:35:47.62:462,48,0	1/1:5,8:13:12.04:294,12,0
chr10	63324592	.	G	GTA	1652.18	PASS	AB=0.772;AC=10;AF=0.179;AN=56;BaseQRankSum=7.026;DP=754;FS=1.804;HRun=0;HaplotypeScore=222.4218;InbreedingCoeff=-0.2216;MQ=59.74;MQ0=3;MQRankSum=-7.592;QD=5.38;ReadPosRankSum=-1.859;VQSLOD=3.1133;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:51.10:0,51,606	0/0:8,0:8:24.08:0,24,367	0/0:25,0:23:66.14:0,66,928	0/0:28,0:24:50.36:0,50,685	0/0:23,0:23:51.07:0,51,550	0/1:14,6:20:4.91:5,0,188	0/1:19,6:25:82.06:82,0,331	0/0:45,0:45:99:0,131,1821	0/0:32,0:32:96.33:0,96,1462	0/1:17,17:34:99:895,0,629	0/0:13,14:27:15.05:0,15,227	0/0:22,2:24:27.29:0,27,448	0/0:22,0:22:34.36:0,34,421	0/0:16,12:28:12.04:0,12,182	0/1:20,8:28:82.21:82,0,203	0/1:24,4:29:31.08:31,0,420	0/0:23,0:23:54.17:0,54,792	0/0:31,0:31:88.34:0,88,1247	0/1:17,6:21:99:300,0,534	0/1:26,17:43:34.01:34,0,461	0/0:11,3:14:4.13:0,4,340	0/0:28,0:28:77.83:0,78,847	0/0:32,0:32:72.03:0,72,773	0/0:21,0:21:54.01:0,54,554	0/1:22,17:39:73.22:73,0,277	0/1:28,2:30:28.55:29,0,927	0/1:21,15:36:99:264,0,504	0/0:5,0:5:15:0,15,148
chr10	63329429	.	G	GA	9168.50	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-12.486;DP=597;FS=1.925;HRun=0;HaplotypeScore=75.5061;InbreedingCoeff=0.9514;MQ=86.08;MQ0=0;MQRankSum=-2.981;QD=37.27;ReadPosRankSum=8.750;VQSLOD=3.7670;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,63:64:99:2501,172,0	0/0:6,0:6:18.06:0,18,250	0/0:24,0:24:69.57:0,70,829	0/0:21,0:21:60.88:0,61,697	1/1:0,31:31:81.21:1157,81,0	0/0:15,0:15:23.78:0,24,171	0/0:19,0:19:27.54:0,28,187	0/0:31,0:31:93.30:0,93,1283	0/0:14,0:14:39.11:0,39,512	0/0:7,0:7:17.86:0,18,134	0/0:14,0:14:2.68:0,3,11	0/0:15,0:15:15.40:0,15,118	1/1:1,19:20:48.15:682,48,0	0/0:14,0:14:21.59:0,22,157	0/0:14,0:14:8.66:0,9,57	0/0:18,0:18:30.65:0,31,202	0/0:26,0:26:78.18:0,78,1002	0/0:30,0:30:87.27:0,87,1197	0/0:21,0:21:48.21:0,48,349	0/0:13,0:13:30.29:0,30,186	0/0:22,0:22:14.43:0,14,102	1/1:0,25:25:69.23:1007,69,0	1/1:0,28:28:69.20:1005,69,0	1/1:0,28:28:69.23:1009,69,0	0/0:12,0:12:26.59:0,27,151	1/1:0,35:35:99:1457,105,0	0/0:15,0:15:31.24:0,31,187	1/1:0,15:15:24.08:350,24,0
chr10	63329773	.	TTGTGTGTGTGTGTGTGTGTG	T	1410.14	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=4.283;DP=575;FS=12.318;HRun=0;HaplotypeScore=267.4297;InbreedingCoeff=0.7881;MQ=65.50;MQ0=12;MQRankSum=-3.187;QD=20.14;ReadPosRankSum=-1.384;VQSLOD=0.7726;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:34:36.23:0,36,1605	0/0:9,0:9:12.04:0,12,837	0/0:26,0:10:6.96:0,7,104	0/0:29,0:23:18.06:0,18,530	0/0:9,0:14:17.23:0,17,876	0/0:15,0:15:24.08:0,24,2086	0/0:15,0:19:10.14:0,10,689	0/0:29,0:28:28.34:0,28,1219	0/0:13,0:17:24.08:0,24,1257	0/0:19,0:23:49.52:0,50,3676	0/0:12,0:14:17.77:0,18,1236	0/0:22,0:22:18.06:0,18,1280	1/1:6,5:11:12.04:639,12,0	0/0:5,0:9:9.49:0,9,723	0/0:19,0:24:29.40:0,29,2190	0/0:23,0:26:32.24:0,32,2107	0/0:36,0:36:72.25:0,72,5457	0/0:11,0:12:27.09:0,27,1604	0/0:16,0:16:17.42:0,17,811	0/0:11,0:13:9.03:0,9,751	0/0:52,0:51:39.95:0,40,2533	1/1:14,7:21:6.90:321,7,0	1/1:10,2:12:6.02:266,6,0	1/1:20,6:26:6.02:320,6,0	0/0:13,0:19:15.03:0,15,753	0/0:15,0:17:30.03:0,30,1106	0/0:13,0:16:27.09:0,27,2330	0/0:5,0:7:5.95:0,6,42
chr10	63329822	.	T	TGTGT	569.61	PASS	AB=0.966;AC=23;AF=0.460;AN=50;BaseQRankSum=-3.360;DP=528;FS=0.000;HRun=0;HaplotypeScore=116.2085;InbreedingCoeff=0.2737;MQ=64.14;MQ0=14;MQRankSum=2.974;QD=2.12;ReadPosRankSum=-1.261;VQSLOD=2.0333;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:34:7.10:0,7,57	0/0:8,0:8:3.01:0,3,46	./.	./.	0/0:18,0:18:1.25:0,1,3	1/1:17,0:17:15.02:173,15,0	1/1:22,0:22:3.01:70,3,0	1/1:22,0:20:0.47:1,0,0	0/0:19,0:19:18.02:0,18,167	0/1:20,0:20:15.72:45,0,16	1/1:14,0:11:5.75:82,6,0	0/1:15,4:22:39.08:39,0,40	0/0:14,0:15:11.99:0,12,112	1/1:6,0:6:6.02:140,6,0	1/1:19,0:20:7.84:35,8,0	1/1:20,0:19:8.09:36,8,0	0/0:34,0:34:27.54:0,28,389	0/1:20,0:20:3.75:4,0,46	./.	1/1:6,0:7:5.42:23,5,0	0/1:28,0:28:0.02:0,0,0	0/0:19,0:19:6:0,6,54	0/0:13,0:13:0:0,0,0	0/0:26,0:26:6.01:0,6,57	0/1:14,0:14:6.44:6,0,19	0/1:16,0:15:11.22:11,0,47	0/1:21,0:21:7.06:53,0,7	0/0:8,0:8:6.01:0,6,55
chr10	63330786	.	GCTGA	G	1831.66	PASS	AB=0.533;AC=7;AF=0.125;AN=56;BaseQRankSum=7.490;DP=437;FS=4.275;HRun=0;HaplotypeScore=75.1596;InbreedingCoeff=0.8024;MQ=92.97;MQ0=0;MQRankSum=-3.580;QD=29.07;ReadPosRankSum=3.467;VQSLOD=3.4380;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,34:35:63.22:1176,63,0	0/0:5,0:5:15.05:0,15,367	0/0:23,0:23:65.88:0,66,1503	0/0:16,0:16:45.15:0,45,1073	1/1:1,15:16:15.05:262,15,0	0/0:11,0:11:30.10:0,30,768	0/0:15,0:15:45.15:0,45,1200	0/0:10,0:10:27.08:0,27,665	0/0:20,0:20:60.20:0,60,1554	0/0:20,0:20:60.18:0,60,1438	0/0:9,0:9:27.09:0,27,717	0/0:18,0:18:54.19:0,54,1401	0/0:12,0:12:30.08:0,30,743	0/0:20,0:20:60.17:0,60,1447	0/0:16,0:16:48.16:0,48,1209	0/0:13,0:13:39.13:0,39,1008	0/0:26,0:26:78.27:0,78,2013	0/0:15,0:15:42.14:0,42,1088	0/0:15,0:15:42.14:0,42,1032	0/0:8,0:8:24.05:0,24,529	0/0:37,0:37:99:0,108,2755	0/0:16,0:16:48.16:0,48,1241	0/0:12,0:12:33.09:0,33,789	0/0:19,0:18:57.20:0,57,1520	0/0:12,0:12:36.11:0,36,905	0/1:1,7:8:55.97:368,0,56	0/0:6,0:6:18.06:0,18,480	1/1:0,4:4:9.03:168,9,0
chr10	63331304	.	AG	A	2723.95	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=10.559;DP=627;FS=2.619;HRun=3;HaplotypeScore=60.2638;InbreedingCoeff=0.9785;MQ=77.25;MQ0=0;MQRankSum=-4.857;QD=28.98;ReadPosRankSum=2.054;VQSLOD=3.0756;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,36:37:99:1229,100,0	0/0:3,0:3:9.01:0,9,110	0/0:10,0:10:29.99:0,30,398	0/0:16,0:16:45.14:0,45,607	1/1:1,21:22:60.09:704,60,0	0/0:18,0:18:51.17:0,51,732	0/0:37,0:37:99:0,102,1428	0/0:27,0:27:78.25:0,78,1107	0/0:28,0:28:81.25:0,81,1129	0/0:12,0:12:30.06:0,30,408	0/0:18,0:18:54.17:0,54,758	0/0:29,0:29:87.28:0,87,1236	0/0:26,0:26:78.22:0,78,1082	0/0:30,0:30:87.28:0,87,1232	0/0:23,0:23:63.21:0,63,906	0/0:23,0:23:66.22:0,66,950	0/0:38,0:38:99:0,114,1619	0/0:20,0:20:60.20:0,60,863	0/0:23,0:23:60.18:0,60,838	0/0:15,0:15:42.09:0,42,561	0/0:41,0:41:99:0,117,1568	0/0:21,0:21:60.19:0,60,836	0/0:11,0:11:27.09:0,27,384	0/0:31,0:31:93.28:0,93,1299	0/0:13,0:13:36.11:0,36,500	1/1:4,22:26:26:764,26,0	0/0:20,0:20:60.20:0,60,863	1/1:0,9:9:15.05:186,15,0
chr10	63331802	.	CTTATTTATTTAT	C	3049.64	PASS	AC=14;AF=0.292;AN=48;BaseQRankSum=2.216;DP=329;FS=7.650;HRun=0;HaplotypeScore=111.2099;InbreedingCoeff=0.7111;MQ=57.47;MQ0=0;MQRankSum=-4.401;QD=27.98;ReadPosRankSum=1.926;VQSLOD=2.2744;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:8,16:24:27.09:700,27,0	0/0:0,0:1:3.01:0,3,157	./.	0/0:7,0:3:3.01:0,3,110	1/1:8,11:19:18.06:531,18,0	0/0:5,0:12:18.06:0,18,893	0/0:5,0:9:6.02:0,6,273	0/0:44,0:44:72.23:0,72,2940	1/1:4,0:23:24.08:629,24,0	0/0:4,0:7:9.03:0,9,467	./.	0/0:1,0:3:3.01:0,3,157	1/1:4,5:9:6.02:210,6,0	0/0:5,0:5:3.01:0,3,151	0/0:4,0:8:9.03:0,9,473	0/0:2,0:7:9.92:0,10,474	0/0:7,0:16:18.95:0,19,757	0/0:8,0:18:27.08:0,27,1063	0/0:18,0:22:30.05:0,30,1060	0/0:4,0:5:3.01:0,3,158	0/0:5,0:8:6.02:0,6,315	./.	1/1:4,3:7:3.01:74,3,0	./.	0/0:9,0:13:15.05:0,15,695	1/1:4,10:14:26.95:680,27,0	0/0:8,0:13:21.06:0,21,951	1/1:3,10:13:12.04:393,12,0
chr10	63332675	.	G	GCACA	9388.48	PASS	AB=0.720;AC=49;AF=0.875;AN=56;BaseQRankSum=0.910;DP=720;FS=1.345;HRun=0;HaplotypeScore=210.0558;InbreedingCoeff=0.3086;MQ=55.61;MQ0=6;MQRankSum=1.454;QD=14.03;ReadPosRankSum=2.815;VQSLOD=4.6855;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:35,0:47:30.10:521,30,0	1/1:5,4:8:9.03:216,9,0	0/0:25,0:12:2.96:0,3,47	0/0:24,0:12:9.03:0,9,134	1/1:8,3:19:24.08:457,24,0	1/1:22,0:21:12.51:231,13,0	1/1:39,0:39:33.03:551,33,0	0/1:33,6:42:6.55:716,0,7	1/1:10,20:36:20.91:1401,21,0	1/1:15,0:16:9.03:157,9,0	1/1:24,0:26:14.78:250,15,0	1/1:21,0:28:24.07:388,24,0	1/1:10,0:20:18.06:297,18,0	1/1:21,0:26:9.03:139,9,0	1/1:25,0:28:21.06:327,21,0	1/1:19,0:21:12:177,12,0	0/1:11,19:35:2.94:1108,0,3	1/1:10,13:25:36.07:812,36,0	1/1:15,0:19:18.06:328,18,0	1/1:18,0:21:9.03:157,9,0	1/1:24,0:30:6.02:122,6,0	1/1:23,0:22:6.02:103,6,0	1/1:6,0:19:9.03:143,9,0	1/1:5,0:30:2.98:29,3,0	1/1:10,0:14:5.99:104,6,0	0/1:21,0:32:14.60:112,0,15	1/1:18,0:25:27.52:420,28,0	1/1:3,0:14:27.45:123,27,0
chr10	63333352	.	G	GTA	2205.72	PASS	AB=0.900;AC=19;AF=0.339;AN=56;BaseQRankSum=-0.957;DP=673;FS=3.400;HRun=0;HaplotypeScore=106.3401;InbreedingCoeff=0.7105;MQ=45.48;MQ0=88;MQRankSum=2.022;QD=8.05;ReadPosRankSum=-0.619;VQSLOD=2.9501;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:43,0:39:36.44:307,36,0	1/1:14,0:11:8.98:77,9,0	0/0:38,0:17:32.31:0,32,326	0/0:42,0:12:32.03:0,32,284	1/1:14,0:11:18.45:162,18,0	0/0:26,0:18:32.80:0,33,321	0/0:25,0:21:35.22:0,35,304	0/1:28,0:24:9.78:288,0,10	1/1:26,1:25:47.96:433,48,0	0/0:29,0:23:65.12:0,65,539	0/0:8,0:4:11.93:0,12,121	0/0:17,0:12:24.05:0,24,256	0/1:17,4:21:11.98:170,0,12	0/0:13,0:12:17.99:0,18,165	0/0:17,0:14:35.77:0,36,352	0/0:15,0:11:29.82:0,30,260	0/1:27,4:26:12.43:271,0,12	1/1:18,8:23:42.15:465,42,0	0/0:10,0:7:18.23:0,18,127	0/0:15,0:10:17.87:0,18,157	0/0:51,0:38:59.58:0,60,489	1/1:17,0:15:6.89:75,7,0	1/1:15,3:15:2.97:45,3,0	1/1:33,1:26:11.97:111,12,0	0/0:16,0:11:32.79:0,33,318	0/0:26,0:18:45.11:0,45,383	0/0:32,0:27:77.93:0,78,712	0/0:18,0:12:26.96:0,27,258
chr10	63333371	.	TG	T	6630.58	PASS	AB=0.636;AC=51;AF=0.911;AN=56;BaseQRankSum=-0.716;DP=665;FS=7.579;HRun=2;HaplotypeScore=72.5657;InbreedingCoeff=0.5721;MQ=39.99;MQ0=117;MQRankSum=1.454;QD=11.35;ReadPosRankSum=4.981;VQSLOD=2.9632;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:33,2:29:20.31:148,20,0	1/1:12,1:10:6.54:27,7,0	0/0:36,0:5:15.03:0,15,156	0/0:45,0:14:25.33:0,25,314	1/1:16,1:13:11.16:77,11,0	1/1:5,23:19:26.88:304,27,0	1/1:8,14:17:22.67:237,23,0	1/1:7,25:24:63.20:795,63,0	1/1:18,0:15:14.02:90,14,0	1/1:5,20:18:48.13:599,48,0	1/1:7,4:5:10.58:121,11,0	1/1:8,13:12:23.99:280,24,0	1/1:23,0:18:19.87:234,20,0	1/1:15,1:15:8.96:95,9,0	1/1:3,12:11:27.07:334,27,0	1/1:3,14:11:28.64:349,29,0	1/1:27,4:25:23.85:148,24,0	1/1:31,2:26:41.01:348,41,0	0/1:3,4:4:21.96:81,0,22	1/1:5,10:10:13.53:137,14,0	1/1:10,32:26:27.06:319,27,0	1/1:20,0:16:4.76:22,5,0	1/1:19,1:17:2.54:12,3,0	1/1:31,2:23:4.01:15,4,0	1/1:4,13:10:30.10:387,30,0	1/1:7,22:18:49.37:588,49,0	1/1:6,21:22:50.93:614,51,0	1/1:5,12:10:21.07:269,21,0
chr10	63333372	.	G	GTGTG	886.42	PASS	AB=0.851;AC=25;AF=0.446;AN=56;BaseQRankSum=-1.690;DP=669;FS=2.469;HRun=0;HaplotypeScore=111.5650;InbreedingCoeff=0.2237;MQ=40.23;MQ0=116;MQRankSum=-2.351;QD=2.20;ReadPosRankSum=-3.354;VQSLOD=1.4418;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:3,0:29:0.37:0,0,23	1/1:2,0:11:5.73:54,6,0	0/0:37,0:6:3.01:0,3,47	0/0:43,0:14:0.57:0,1,26	0/0:3,0:14:4.69:0,5,12	0/0:25,0:19:17.42:0,17,134	0/1:19,0:17:36.39:38,0,36	1/1:31,0:25:14.25:109,14,0	0/1:1,0:15:0.27:29,0,0	0/1:22,0:18:29.42:29,0,74	0/0:6,0:6:9.85:0,10,71	0/0:16,0:12:19.76:0,20,147	1/1:6,0:19:5.81:108,6,0	0/0:13,0:14:5.66:0,6,48	0/1:14,0:12:14.56:15,0,137	0/1:14,0:11:0.74:1,0,59	1/1:7,0:24:12.56:142,13,0	1/1:5,0:26:12.19:211,12,0	0/1:7,0:4:0:0,0,0	0/0:11,0:10:9.46:0,9,58	0/1:36,0:25:31.73:48,0,32	1/1:3,0:17:6.02:86,6,0	1/1:3,1:19:3.48:35,3,0	1/1:7,0:25:5.82:86,6,0	0/1:15,0:10:14.44:14,0,127	0/1:23,0:17:47.72:48,0,58	0/0:23,0:20:44.64:0,45,302	0/0:16,0:10:4.74:0,5,100
chr10	63333895	.	CCTCT	C	1953.18	PASS	AB=0.862;AC=33;AF=0.660;AN=50;BaseQRankSum=-0.360;DP=321;FS=16.876;HRun=0;HaplotypeScore=82.1586;InbreedingCoeff=0.4266;MQ=72.72;MQ0=12;MQRankSum=-1.284;QD=9.97;ReadPosRankSum=1.538;VQSLOD=1.1158;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:7:0.46:0,0,1	1/1:2,0:2:4.07:11,4,0	0/0:30,0:14:5.98:0,6,55	0/0:42,0:21:4.93:0,5,100	0/1:9,0:9:0.02:0,0,0	1/1:5,8:13:2.97:20,3,0	1/1:0,8:8:3.01:38,3,0	0/0:10,0:10:1.84:0,2,5	1/1:5,0:5:3:26,3,0	0/1:5,0:15:18.30:18,0,152	0/0:3,0:8:14.34:0,14,84	1/1:14,0:15:5.75:96,6,0	1/1:2,0:2:3:27,3,0	1/1:8,0:8:13.05:161,13,0	1/1:13,1:14:29.87:370,30,0	1/1:7,0:7:20.90:218,21,0	0/0:9,0:8:15.57:0,16,225	0/0:3,0:3:2.47:0,2,43	1/1:8,8:16:23.79:295,24,0	1/1:15,0:15:26.89:290,27,0	1/1:14,0:13:12.03:161,12,0	./.	./.	./.	1/1:2,13:15:2.82:19,3,0	1/1:16,0:16:30.21:229,30,0	1/1:5,0:5:0.88:108,1,0	0/1:15,0:13:11.51:12,0,37
chr10	63333902	.	CTCTCTCTCTCTCTCTCTCTCTT	C	265.16	PASS	AB=1.000;AC=14;AF=0.280;AN=50;BaseQRankSum=-3.506;DP=341;FS=2.048;HRun=0;HaplotypeScore=169.8356;InbreedingCoeff=0.1911;MQ=67.96;MQ0=16;MQRankSum=-0.888;QD=1.88;ReadPosRankSum=-0.010;VQSLOD=2.9820;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:8,0:7:2.19:16,2,0	0/0:3,0:2:6.02:0,6,276	0/1:28,0:13:0.83:1,0,21	0/1:35,0:17:8.96:18,0,9	0/0:10,0:10:3.26:0,3,10	0/0:15,0:15:5.14:0,5,15	1/1:9,0:8:2.96:19,3,0	0/0:12,0:12:6.02:0,6,180	1/1:5,0:5:2.99:146,3,0	0/0:20,0:18:23.93:0,24,1797	0/0:11,0:10:2.70:0,3,7	0/0:16,0:16:9.24:0,9,402	1/1:2,0:2:3.01:159,3,0	0/0:9,0:9:21.53:0,22,1327	0/1:15,0:15:11.39:11,0,1460	0/1:7,0:7:1.51:2,0,884	0/0:9,0:8:7.55:0,8,1261	0/0:3,0:3:6.02:0,6,344	0/1:18,0:18:17.60:18,0,1510	0/0:16,0:16:24.06:0,24,1291	0/1:14,0:13:2.34:2,0,480	./.	./.	./.	0/0:18,0:18:10.23:0,10,248	0/0:17,0:17:24.23:0,24,2103	0/0:8,0:7:21.07:0,21,1178	0/0:13,0:11:1.34:0,1,171
chr10	63333920	.	CTCTT	C	1839.02	PASS	AB=1.000;AC=32;AF=0.640;AN=50;BaseQRankSum=-2.871;DP=327;FS=5.294;HRun=0;HaplotypeScore=97.1717;InbreedingCoeff=-0.0918;MQ=49.33;MQ0=19;MQRankSum=4.340;QD=6.86;ReadPosRankSum=4.065;VQSLOD=1.4464;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:8,0:7:2.88:17,3,0	1/1:3,0:2:5.91:38,6,0	0/1:13,0:3:0.83:1,0,21	0/1:19,0:5:4.59:18,0,5	0/0:10,1:10:2.22:0,2,8	1/1:18,0:18:6.69:110,7,0	0/1:14,0:13:8.65:9,0,11	0/1:9,0:8:15.84:28,0,16	1/1:7,0:7:5.78:48,6,0	0/1:24,0:22:95.34:138,0,95	0/0:11,0:10:3.85:0,4,11	0/1:18,0:16:0.53:36,0,1	1/1:7,0:7:10.82:80,11,0	0/1:10,0:10:36.81:37,0,51	1/1:20,0:20:9.99:134,10,0	1/1:8,0:8:3.42:135,3,0	0/1:9,0:8:11.91:12,0,85	0/1:3,0:3:12.98:13,0,19	0/1:15,0:15:51.43:148,0,51	1/1:15,0:15:12.38:178,12,0	0/1:13,0:12:3.91:54,0,4	./.	./.	./.	0/0:17,0:17:10.04:0,10,60	1/1:18,1:19:57.03:665,57,0	0/1:8,0:7:21.57:44,0,22	1/1:5,3:5:3.01:40,3,0
chr10	63333922	.	CTT	C	2222.81	PASS	AB=0.939;AC=36;AF=0.720;AN=50;BaseQRankSum=-2.435;DP=326;FS=9.903;HRun=3;HaplotypeScore=90.0658;InbreedingCoeff=0.0955;MQ=49.46;MQ0=18;MQRankSum=6.772;QD=8.23;ReadPosRankSum=6.067;VQSLOD=-0.4265;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,1:7:2.58:18,3,0	1/1:3,0:2:5.91:38,6,0	0/1:12,0:3:0.83:1,0,21	0/1:17,0:4:4.74:18,0,5	0/0:9,2:10:2.22:0,2,8	1/1:19,0:19:10.03:132,10,0	0/1:14,0:13:8.79:9,0,13	0/1:7,0:6:16.98:28,0,17	1/1:7,0:7:5.63:35,6,0	0/1:26,0:24:18.04:175,0,18	0/0:11,0:10:3.85:0,4,11	0/1:4,14:16:0.17:62,0,0	1/1:8,0:8:6.09:49,6,0	1/1:11,0:11:11.70:131,12,0	1/1:20,0:20:6.42:188,6,0	1/1:9,0:9:11.17:192,11,0	1/1:8,1:8:10.93:63,11,0	1/1:3,0:3:1.52:17,2,0	0/1:15,0:15:43.13:203,0,43	1/1:14,1:15:20.80:268,21,0	0/1:13,0:12:3.05:77,0,3	./.	./.	./.	0/0:17,0:17:10.04:0,10,60	1/1:19,0:19:56.86:536,57,0	1/1:8,0:7:3.29:101,3,0	1/1:8,0:5:2.96:19,3,0
chr10	63333973	.	ACT	A	208.08	PASS	AB=0.969;AC=9;AF=0.173;AN=52;BaseQRankSum=6.961;DP=427;FS=16.941;HRun=0;HaplotypeScore=119.0232;InbreedingCoeff=0.0376;MQ=47.54;MQ0=10;MQRankSum=-2.880;QD=1.75;ReadPosRankSum=-3.817;VQSLOD=0.0735;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:13,3:15:8.73:60,9,0	./.	0/0:19,0:5:11.81:0,12,94	0/1:20,0:6:30.49:30,0,92	0/0:12,0:12:0.33:0,0,1	0/0:20,0:20:45.15:0,45,701	0/0:18,0:18:32.97:0,33,365	0/0:15,0:13:27.82:0,28,269	0/0:9,0:9:6.49:0,6,73	0/0:21,0:21:27.84:0,28,584	0/0:6,0:6:8.56:0,9,90	0/0:20,0:20:12.92:0,13,408	0/0:20,0:20:11.34:0,11,246	0/0:15,0:15:26.82:0,27,268	0/1:23,0:23:7.87:8,0,309	0/0:10,0:10:5.86:0,6,248	0/1:10,0:10:32.74:33,0,128	0/1:9,0:9:2.23:2,0,130	0/1:15,0:13:26.79:27,0,218	0/0:10,0:10:17.26:0,17,211	0/0:43,0:42:73.70:0,74,1028	0/0:16,0:16:11.99:0,12,103	./.	0/0:20,0:20:11.87:0,12,100	0/0:15,0:15:27.07:0,27,381	0/1:17,2:19:99:144,0,189	0/1:6,1:7:33.83:34,0,69	0/0:9,0:8:6.39:0,6,126
chr10	63333983	.	T	TCA	1501.19	PASS	AB=0.650;AC=9;AF=0.167;AN=54;BaseQRankSum=-2.601;DP=456;FS=6.006;HRun=0;HaplotypeScore=109.5129;InbreedingCoeff=0.7803;MQ=52.53;MQ0=9;MQRankSum=-0.625;QD=21.14;ReadPosRankSum=-0.725;VQSLOD=3.3018;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,2:16:15.05:227,15,0	./.	0/0:24,0:9:18.90:0,19,247	0/0:31,0:12:25.90:0,26,362	0/1:6,7:13:23.81:188,0,24	0/0:22,0:22:53.77:0,54,668	0/0:18,0:18:39.13:0,39,506	1/1:5,13:17:39.08:601,39,0	0/0:11,0:11:14.89:0,15,171	0/0:23,0:23:26.70:0,27,613	0/0:8,0:8:12.04:0,12,156	0/0:17,0:17:36.12:0,36,467	0/0:20,0:20:30.41:0,30,328	0/0:16,0:16:26.88:0,27,334	0/0:20,0:20:27.09:0,27,351	0/0:10,0:10:30.08:0,30,370	1/1:1,11:12:21.07:339,21,0	1/1:1,11:12:18.06:306,18,0	0/0:13,0:11:21.07:0,21,272	0/0:9,0:9:18.06:0,18,233	0/0:53,0:53:99:0,135,1692	0/0:15,0:15:12:0,12,156	0/0:9,0:9:3.01:0,3,39	0/0:22,0:22:20.80:0,21,236	0/0:12,0:12:23.70:0,24,303	0/0:14,0:14:16.95:0,17,231	0/0:6,0:6:8.93:0,9,87	0/0:9,0:9:18.06:0,18,233
chr10	63334385	.	GA	G	1839.37	PASS	AB=0.917;AC=20;AF=0.357;AN=56;BaseQRankSum=6.685;DP=587;FS=5.482;HRun=12;HaplotypeScore=75.5736;InbreedingCoeff=0.7467;MQ=81.83;MQ0=0;MQRankSum=0.530;QD=8.44;ReadPosRankSum=4.437;VQSLOD=2.7974;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,33:40:76.73:586,77,0	0/0:8,1:9:0.74:0,1,172	0/1:33,2:27:28.54:29,0,244	0/0:34,0:27:20.62:0,21,164	1/1:7,14:21:11.35:271,11,0	0/0:22,0:22:54.06:0,54,532	0/0:11,1:15:9.65:0,10,260	0/0:31,1:35:49.26:0,49,609	1/1:2,0:16:24.44:71,24,0	0/0:19,0:21:56.71:0,57,512	0/0:21,0:24:56.75:0,57,526	0/0:15,0:15:36.02:0,36,348	1/1:3,12:15:5.42:223,5,0	0/0:13,0:15:38.91:0,39,378	0/0:26,0:26:62.98:0,63,614	0/0:11,0:13:29.03:0,29,300	0/0:27,0:27:69.10:0,69,681	0/1:15,2:20:21.91:22,0,305	0/0:23,0:27:65.55:0,66,594	0/0:22,1:23:27.85:0,28,457	0/0:11,0:16:35.73:0,36,327	1/1:3,9:13:25.94:192,26,0	1/1:2,13:15:32.87:255,33,0	1/1:4,18:22:14.39:295,14,0	0/0:17,0:22:38.57:0,39,342	1/1:2,0:15:27.82:91,28,0	0/0:21,0:22:38.88:0,39,362	1/1:3,0:4:2.01:6,2,0
chr10	63335862	.	CACATTCACACA	C	357.03	PASS	AB=1.000;AC=11;AF=0.786;AN=14;BaseQRankSum=-0.909;DP=218;FS=1.678;HRun=0;HaplotypeScore=80.8409;MQ=86.38;MQ0=14;MQRankSum=-1.288;QD=3.80;ReadPosRankSum=2.702;VQSLOD=1.4175;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:49,0:23:60.06:0,60,919	0/1:58,0:32:38.51:39,0,941	./.	./.	./.	./.	1/1:7,1:7:3.01:74,3,0	./.	./.	1/1:5,4:8:3.01:100,3,0	./.	./.	1/1:3,2:5:3.01:101,3,0	./.	./.	./.	./.	./.	./.	1/1:7,0:7:6.01:75,6,0	./.	1/1:5,1:5:3.01:54,3,0	./.	./.	./.	./.
chr10	63336025	.	CA	C	2671.52	PASS	AB=0.867;AC=39;AF=0.929;AN=42;BaseQRankSum=-0.340;DP=337;FS=22.452;HRun=2;HaplotypeScore=52.6437;InbreedingCoeff=0.0186;MQ=79.41;MQ0=15;MQRankSum=-7.291;QD=8.37;ReadPosRankSum=5.185;VQSLOD=-0.6894;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,7:7:7.27:81,7,0	./.	0/1:19,0:16:11.59:12,0,228	0/1:40,0:36:26.49:26,0,503	0/1:3,6:4:0:0,0,0	1/1:0,5:5:9.03:116,9,0	1/1:0,4:3:6.02:78,6,0	./.	1/1:5,14:11:9.03:117,9,0	1/1:3,6:3:6.02:78,6,0	./.	1/1:0,18:15:21.07:272,21,0	1/1:2,25:19:6.02:78,6,0	1/1:1,18:11:21.07:272,21,0	1/1:1,24:17:18.06:233,18,0	1/1:2,13:14:21.07:272,21,0	./.	1/1:0,5:5:6.02:78,6,0	1/1:0,5:3:9.03:117,9,0	./.	1/1:0,17:13:9.03:116,9,0	1/1:1,13:7:11.83:129,12,0	./.	1/1:1,17:8:3.01:39,3,0	./.	1/1:5,21:17:6.23:461,6,0	1/1:0,10:6:9.03:117,9,0	1/1:0,7:4:6.02:78,6,0
chr10	63336518	.	CTGAA	C	612.22	PASS	AB=1.000;AC=15;AF=0.938;AN=16;BaseQRankSum=-2.302;DP=160;FS=0.000;HRun=0;HaplotypeScore=9.0128;MQ=41.26;MQ0=50;MQRankSum=-2.143;QD=10.56;ReadPosRankSum=2.143;VQSLOD=1.3641;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,3:2:3.01:39,3,0	./.	0/1:5,0:3:23.94:24,0,39	./.	./.	./.	./.	./.	1/1:8,9:3:3:25,3,0	1/1:1,1:1:3:26,3,0	1/1:1,3:3:3.01:62,3,0	./.	./.	./.	./.	./.	./.	./.	1/1:2,0:2:3.01:60,3,0	./.	1/1:6,2:3:6.02:97,6,0	./.	./.	./.	./.	1/1:3,8:7:18.06:357,18,0	./.	./.
chr10	63339373	.	TAC	T	480.91	PASS	AB=0.955;AC=24;AF=0.480;AN=50;BaseQRankSum=-0.923;DP=461;FS=1.948;HRun=0;HaplotypeScore=63.3230;InbreedingCoeff=0.3155;MQ=67.44;MQ0=7;MQRankSum=0.144;QD=2.28;ReadPosRankSum=2.129;VQSLOD=1.6611;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:6.24:0,6,294	./.	./.	./.	0/0:12,0:12:6.02:0,6,84	1/1:21,0:22:5.21:87,5,0	1/1:21,0:21:5.85:44,6,0	0/0:18,0:16:4.69:0,5,20	0/0:15,0:15:5.89:0,6,156	1/1:19,0:19:2.46:26,2,0	1/1:5,1:6:3.89:34,4,0	1/1:13,4:17:3:32,3,0	0/0:11,0:11:11.98:0,12,121	1/1:8,5:14:5.85:46,6,0	1/1:6,4:10:3.01:32,3,0	1/1:7,0:7:12.69:99,13,0	0/0:23,0:33:12:0,12,120	0/0:14,0:18:8.75:0,9,60	1/1:8,0:8:2.84:14,3,0	0/1:14,0:15:1.50:2,0,39	0/1:34,1:35:29.06:112,0,29	0/0:12,0:11:2.48:0,2,36	0/0:19,0:18:2.43:0,2,18	0/0:22,0:20:8.79:0,9,81	1/1:9,0:9:2.69:8,3,0	0/1:16,0:15:49.39:49,0,113	0/1:9,2:11:47.63:50,0,48	0/0:5,0:5:3.05:0,3,59
chr10	63339542	.	C	CTGGTT	1192.54	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-5.515;DP=722;FS=10.134;HRun=0;HaplotypeScore=129.2223;InbreedingCoeff=0.9196;MQ=64.63;MQ0=4;MQRankSum=-0.659;QD=29.81;ReadPosRankSum=0.334;VQSLOD=3.0917;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,99,1680	0/0:5,0:5:12.04:0,12,215	0/0:42,0:26:20.70:0,21,257	0/0:60,0:36:15.51:0,16,224	0/0:23,0:23:30.08:0,30,496	0/0:30,0:30:54.12:0,54,870	0/0:28,0:28:42.09:0,42,643	0/0:15,0:15:24.05:0,24,324	0/0:21,0:21:36.07:0,36,561	0/0:36,0:34:57.18:0,57,985	0/0:16,0:16:24.07:0,24,403	0/0:20,0:20:48.08:0,48,747	0/0:34,0:34:78.22:0,78,1309	0/0:21,0:21:39.08:0,39,610	0/0:31,0:31:63.18:0,63,1075	0/0:25,0:25:60.21:0,60,1070	0/0:25,0:25:48.16:0,48,857	0/0:21,0:21:15.92:0,16,532	0/0:12,0:11:12.03:0,12,191	0/0:30,0:30:53.89:0,54,837	0/0:36,0:36:65.92:0,66,1128	0/0:22,0:22:30.10:0,30,516	0/0:23,0:23:36.08:0,36,560	0/0:25,0:25:45.15:0,45,767	0/0:14,0:14:24.06:0,24,402	1/1:10,16:26:42.14:1052,42,0	0/0:23,0:23:48.14:0,48,824	1/1:4,10:14:9.03:255,9,0
chr10	63340173	.	CT	C	1661.22	PASS	AB=0.767;AC=17;AF=0.304;AN=56;BaseQRankSum=8.357;DP=484;FS=18.082;HRun=11;HaplotypeScore=53.1171;InbreedingCoeff=0.5697;MQ=56.41;MQ0=19;MQRankSum=3.332;QD=9.18;ReadPosRankSum=0.572;VQSLOD=0.6957;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:68.32:0,68,858	1/1:1,6:6:17.98:148,18,0	1/1:10,1:3:2.99:25,3,0	0/0:14,0:6:2.74:0,3,12	0/0:13,1:16:11.10:0,11,276	0/0:19,0:19:44.94:0,45,455	0/0:12,0:11:21.05:0,21,224	1/1:11,12:23:35.89:295,36,0	0/1:4,11:16:6.94:135,0,7	0/0:15,0:14:27.07:0,27,288	0/1:10,2:11:9.59:10,0,111	0/0:13,0:13:32.95:0,33,335	0/0:11,0:11:27.07:0,27,288	0/0:16,0:14:27.07:0,27,288	0/0:20,0:20:42.11:0,42,448	0/0:17,0:17:36.03:0,36,359	1/1:7,26:30:65.91:542,66,0	1/1:3,12:15:35.94:296,36,0	0/0:23,0:22:57.14:0,57,607	0/1:15,2:17:10.21:10,0,305	0/0:21,0:19:44.93:0,45,478	0/0:11,0:11:20.89:0,21,206	0/0:10,0:9:21.05:0,21,224	0/1:17,2:18:13.20:13,0,284	0/0:10,0:10:18.03:0,18,184	1/1:4,12:16:6.96:264,7,0	0/0:23,0:21:51.13:0,51,543	0/1:4,6:10:1.48:109,0,1
chr10	63340660	.	CT	C	9194.44	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=10.880;DP=524;FS=14.456;HRun=1;HaplotypeScore=54.2186;InbreedingCoeff=0.9966;MQ=75.08;MQ0=1;MQRankSum=-0.997;QD=38.63;ReadPosRankSum=2.410;VQSLOD=3.9509;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:84.07:0,84,1290	0/0:6,0:6:18.06:0,18,286	0/0:25,0:24:21.15:0,21,787	0/0:28,0:27:59.41:0,59,971	0/0:16,0:16:48.15:0,48,742	1/1:1,16:17:29.61:419,30,0	1/1:0,18:18:48.16:671,48,0	0/0:34,0:34:99:0,102,1621	0/0:28,0:28:84.27:0,84,1320	1/1:0,24:24:72.22:986,72,0	1/1:0,10:10:24.08:336,24,0	1/1:0,25:25:69.23:965,69,0	0/0:16,0:16:48.16:0,48,764	1/1:0,14:14:42.14:587,42,0	1/1:0,16:16:48.16:671,48,0	1/1:0,15:15:42.14:587,42,0	0/0:12,0:12:36.08:0,36,548	0/0:22,0:22:63.21:0,63,991	1/1:0,32:31:93.31:1294,93,0	1/1:0,15:15:45.15:629,45,0	1/1:0,19:19:57.19:791,57,0	0/0:9,0:9:27.09:0,27,426	0/0:10,0:10:30.10:0,30,480	0/0:21,0:21:63.21:0,63,1001	1/1:0,14:14:36.12:503,36,0	0/0:25,0:25:75.26:0,75,1200	1/1:0,19:18:54.18:755,54,0	0/0:6,0:6:18.06:0,18,288
chr10	63342247	.	A	AT	9890.94	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-3.893;DP=414;FS=14.836;HRun=8;HaplotypeScore=35.1442;InbreedingCoeff=0.8437;MQ=62.93;MQ0=4;MQRankSum=-2.007;QD=24.54;ReadPosRankSum=2.847;VQSLOD=3.7775;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,17:24:48.14:547,48,0	1/1:1,5:6:15.04:173,15,0	0/0:6,0:5:15.01:0,15,137	0/0:5,0:5:5.22:0,5,54	1/1:4,23:27:54.16:623,54,0	1/1:1,30:30:69.21:796,69,0	1/1:1,7:7:21.06:242,21,0	1/1:9,15:21:42.09:462,42,0	1/1:1,10:11:24.07:275,24,0	1/1:1,16:17:45.13:519,45,0	1/1:4,11:15:32.93:345,33,0	1/1:0,13:13:27.08:311,27,0	1/1:2,15:17:45.13:519,45,0	1/1:0,6:6:9.03:104,9,0	1/1:1,18:19:45.13:519,45,0	1/1:3,9:11:21.06:242,21,0	1/1:4,19:22:39.12:450,39,0	1/1:2,21:23:57.17:658,57,0	1/1:4,12:16:33.10:381,33,0	1/1:3,13:15:33.10:381,33,0	1/1:3,7:10:21.06:242,21,0	1/1:0,3:3:9.03:104,9,0	1/1:2,8:10:21.06:242,21,0	1/1:1,7:8:15.04:173,15,0	1/1:0,16:16:36.11:415,36,0	1/1:1,18:19:51.14:578,51,0	1/1:3,12:15:27.08:312,27,0	1/1:1,12:13:24.07:277,24,0
chr10	63342491	.	G	GC	1739.02	PASS	AB=0.693;AC=28;AF=0.500;AN=56;BaseQRankSum=-3.369;DP=378;FS=0.000;HRun=10;HaplotypeScore=52.1723;InbreedingCoeff=0.1257;MQ=74.68;MQ0=1;MQRankSum=1.367;QD=6.71;ReadPosRankSum=0.086;VQSLOD=0.8030;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,14:24:2.97:160,3,0	0/0:10,0:10:16.94:0,17,101	0/0:16,0:11:14.58:0,15,93	0/0:19,0:11:8.94:0,9,68	1/1:11,0:11:11.34:116,11,0	0/1:6,10:16:9.67:98,0,10	0/1:6,15:23:13.40:242,0,13	0/0:19,0:19:20.70:0,21,155	0/1:15,0:15:16.85:17,0,93	1/1:3,6:9:12.02:120,12,0	1/1:2,5:7:2.80:13,3,0	0/1:5,11:16:28:109,0,28	0/1:3,5:8:21.54:53,0,22	0/0:3,1:4:2.99:0,3,25	0/1:4,9:13:11.21:26,0,11	0/1:3,7:10:9.04:43,0,9	0/0:17,1:19:5.81:0,6,234	0/1:11,0:11:9.23:9,0,84	0/1:9,6:15:49.77:113,0,50	1/1:4,7:11:14.65:100,15,0	1/1:5,14:19:21.05:224,21,0	1/1:9,0:9:1.25:3,1,0	0/0:4,0:9:0.46:0,0,1	1/1:12,4:16:8.45:284,8,0	1/1:0,11:12:3.01:31,3,0	0/0:3,0:14:23.34:0,23,80	0/1:6,7:14:24.90:150,0,25	0/0:1,0:8:17.10:0,17,55
chr10	63344120	.	C	CCA	1288.11	PASS	AB=0.870;AC=28;AF=0.538;AN=52;BaseQRankSum=0.352;DP=551;FS=5.823;HRun=0;HaplotypeScore=92.2705;InbreedingCoeff=0.1464;MQ=57.31;MQ0=26;MQRankSum=-2.202;QD=3.59;ReadPosRankSum=-0.396;VQSLOD=1.7970;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:36:25.31:0,25,234	1/1:2,0:3:5.97:45,6,0	./.	./.	0/0:13,0:14:8.53:0,9,57	0/1:18,11:29:70.72:71,0,76	0/1:29,0:29:33.27:159,0,33	1/1:26,0:21:12.35:98,12,0	1/1:16,0:17:9.45:86,9,0	0/0:15,0:12:1.55:0,2,4	0/1:9,3:12:26.40:39,0,26	0/1:20,12:34:20.89:168,0,21	0/0:13,0:13:5.38:0,5,57	1/1:13,7:19:6.02:82,6,0	0/1:13,6:17:20.39:99,0,20	0/1:17,0:17:25.25:25,0,41	1/1:20,1:31:13.31:90,13,0	1/1:7,0:13:5.37:34,5,0	1/1:19,7:25:17.13:197,17,0	0/0:6,0:7:2.84:0,3,14	0/1:40,0:36:69.46:79,0,69	0/0:12,0:12:5.81:0,6,33	1/1:7,0:6:2.84:14,3,0	0/0:23,0:31:34.57:0,35,157	0/0:6,2:8:5.27:0,5,40	1/1:13,0:14:11.39:74,11,0	0/1:13,0:13:50.95:68,0,51	1/1:3,0:3:3:27,3,0
chr10	63344211	.	GGAAA	G	3002.18	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=8.470;DP=795;FS=0.000;HRun=0;HaplotypeScore=155.1475;InbreedingCoeff=0.9901;MQ=76.97;MQ0=2;MQRankSum=-0.936;QD=30.02;ReadPosRankSum=4.978;VQSLOD=3.4854;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,108,2396	0/0:7,0:7:21.07:0,21,569	0/0:56,0:42:99:0,99,2037	0/0:73,1:59:93.75:0,94,1717	0/0:28,0:28:80.97:0,81,1970	0/0:16,0:16:45.15:0,45,1177	0/0:30,0:31:84.98:0,85,2096	0/0:22,0:22:54.17:0,54,1236	0/0:19,0:19:54.19:0,54,1414	0/0:32,0:32:96.31:0,96,2444	0/0:20,0:20:58.05:0,58,1369	0/0:46,0:46:99:0,129,3328	1/1:2,14:16:30.10:581,30,0	0/0:22,0:22:63.22:0,63,1675	0/0:22,0:22:62.95:0,63,1612	0/0:22,0:22:66.23:0,66,1792	0/0:44,0:44:99:0,120,3048	0/0:22,0:22:63.22:0,63,1656	0/0:23,0:23:66.22:0,66,1729	0/0:26,0:26:65.28:0,65,1922	0/0:35,0:35:99:0,100,2281	1/1:2,25:27:48.16:930,48,0	1/1:0,22:22:33.11:639,33,0	1/1:2,33:35:54.63:1012,55,0	0/0:23,0:23:63.21:0,63,1665	0/0:28,0:28:84.28:0,84,2138	0/0:27,0:27:78.27:0,78,2112	0/0:4,0:4:12.04:0,12,327
chr10	63344584	.	GAA	G	2730.94	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=0.619;DP=516;FS=4.647;HRun=12;HaplotypeScore=70.5120;InbreedingCoeff=0.9263;MQ=57.58;MQ0=22;MQRankSum=-0.013;QD=17.62;ReadPosRankSum=5.281;VQSLOD=2.7891;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,26:33:57.10:579,57,0	1/1:0,4:4:6.01:59,6,0	0/0:28,0:9:15.21:0,15,231	0/0:8,0:4:8.86:0,9,88	1/1:5,24:27:55.74:560,56,0	0/0:20,0:17:35.45:0,35,406	0/0:8,0:9:27.08:0,27,387	1/1:5,15:19:35.77:364,36,0	0/0:4,0:11:25.65:0,26,115	0/0:23,0:23:54.10:0,54,739	0/0:14,0:14:42.03:0,42,524	0/0:18,0:16:34.41:0,34,453	0/0:2,0:12:26.51:0,27,92	0/0:11,0:11:21.06:0,21,288	0/0:10,0:13:33.10:0,33,459	0/0:10,0:12:24.07:0,24,341	1/1:5,33:37:80.02:872,80,0	1/1:4,24:26:41.77:479,42,0	0/0:21,0:22:60.12:0,60,802	0/0:14,0:15:36.94:0,37,464	0/0:12,0:13:21.06:0,21,297	0/0:2,0:13:25.29:0,25,98	0/0:7,0:25:34.27:0,34,153	0/0:5,0:27:49.91:0,50,175	0/0:17,0:14:33.05:0,33,419	0/0:6,0:15:22.74:0,23,121	0/0:20,0:20:49.85:0,50,598	0/0:0,0:5:2.50:0,2,9
chr10	63344658	.	G	GA	759.35	PASS	AB=0.729;AC=5;AF=0.089;AN=56;BaseQRankSum=8.354;DP=740;FS=1.401;HRun=1;HaplotypeScore=112.6256;InbreedingCoeff=-0.0935;MQ=64.47;MQ0=12;MQRankSum=-7.367;QD=7.44;ReadPosRankSum=-3.181;VQSLOD=-0.3268;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:57.04:0,57,723	0/0:12,0:12:33.11:0,33,428	0/0:59,0:19:45.58:0,46,545	0/0:79,0:28:53.29:0,53,555	0/0:32,0:32:93.29:0,93,1191	0/0:19,0:19:54.18:0,54,701	0/0:25,0:25:75.24:0,75,973	0/0:31,0:31:84.26:0,84,1075	0/1:3,0:13:5.96:6,0,32	0/0:28,0:28:78.13:0,78,967	0/0:25,0:25:72.23:0,72,934	0/0:19,0:19:57.19:0,57,740	0/1:21,9:30:99:299,0,589	0/0:17,0:17:48.16:0,48,623	0/0:18,0:18:51.17:0,51,661	0/0:15,0:15:40.37:0,40,509	0/0:40,0:40:99:0,108,1388	0/0:28,0:28:63.20:0,63,816	0/0:20,0:20:57.18:0,57,739	0/0:34,0:34:93.30:0,93,1207	0/0:18,0:18:54.18:0,54,701	0/1:18,4:22:99:179,0,439	0/1:15,11:26:99:351,0,348	0/1:7,3:9:37.98:38,0,162	0/0:27,0:27:75.24:0,75,973	0/0:22,0:22:66.21:0,66,857	0/0:24,0:24:72.23:0,72,935	0/0:23,0:23:48.16:0,48,623
chr10	63344683	.	A	AG	302.53	PASS	AB=0.694;AC=4;AF=0.071;AN=56;BaseQRankSum=12.056;DP=742;FS=0.506;HRun=0;HaplotypeScore=101.9663;InbreedingCoeff=-0.0721;MQ=55.62;MQ0=20;MQRankSum=-8.725;QD=3.69;ReadPosRankSum=1.654;VQSLOD=2.9961;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:57.16:0,57,761	0/0:16,0:16:42.12:0,42,557	0/0:61,0:16:31.65:0,32,434	0/0:82,0:21:17.58:0,18,307	0/0:29,0:29:78.17:0,78,1016	0/0:21,0:21:60.16:0,60,816	0/0:23,0:23:66.16:0,66,854	0/0:31,0:31:93.27:0,93,1223	0/0:16,0:15:18.04:0,18,218	0/0:22,0:22:60.17:0,60,781	0/0:23,0:22:60.18:0,60,801	0/0:21,0:21:60.18:0,60,808	0/1:15,5:28:99:147,0,138	0/0:22,0:22:63.67:0,64,866	0/0:17,0:17:51.14:0,51,667	0/0:12,0:12:36:0,36,462	0/0:37,0:37:99:0,102,1392	0/0:22,0:21:63.20:0,63,864	0/0:23,0:20:57.17:0,57,751	0/0:36,0:36:99:0,108,1491	0/0:18,0:18:54.18:0,54,754	0/1:12,6:22:76.62:147,0,77	0/1:11,3:22:99:107,0,145	0/1:6,2:8:4.37:4,0,124	0/0:25,0:25:69.22:0,69,936	0/0:21,0:21:63.20:0,63,865	0/0:27,0:27:78.23:0,78,1053	0/0:33,0:33:84.25:0,84,1137
chr10	63346061	.	GA	G	1311.02	PASS	AB=0.643;AC=22;AF=0.440;AN=50;BaseQRankSum=3.409;DP=293;FS=4.541;HRun=7;HaplotypeScore=75.3020;InbreedingCoeff=0.6553;MQ=45.38;MQ0=19;MQRankSum=-0.774;QD=9.78;ReadPosRankSum=3.318;VQSLOD=1.4465;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:30:44.41:0,44,515	0/0:3,0:3:3.48:0,3,38	./.	./.	0/0:10,0:10:6.75:0,7,52	1/1:1,7:5:9.02:91,9,0	0/1:6,4:6:8.02:52,0,8	0/0:16,0:15:39.89:0,40,437	0/0:6,0:6:6.02:0,6,75	1/1:4,10:14:27.04:268,27,0	1/1:5,1:6:5.09:53,5,0	1/1:8,3:11:7.25:128,7,0	0/0:9,0:9:12.02:0,12,138	1/1:3,4:7:8.55:91,9,0	1/1:3,5:6:6.01:61,6,0	1/1:5,7:10:7.55:142,8,0	0/0:30,0:29:49.50:0,49,592	0/0:5,0:4:11.77:0,12,126	1/1:6,12:14:30.06:305,30,0	1/1:2,12:13:18.02:182,18,0	./.	0/0:4,0:4:3.01:0,3,38	0/0:9,0:9:6.02:0,6,75	0/0:8,0:6:5.23:0,5,45	0/1:2,6:7:0:0,0,0	0/0:12,0:11:27.04:0,27,322	1/1:7,10:15:5.99:113,6,0	0/0:9,0:4:2.69:0,3,7
chr10	63346072	.	CCAA	C	103.38	PASS	AB=0.948;AC=14;AF=0.250;AN=56;BaseQRankSum=0.292;DP=312;FS=48.793;HRun=0;HaplotypeScore=71.3437;InbreedingCoeff=-0.0862;MQ=44.38;MQ0=26;MQRankSum=-0.486;QD=0.82;ReadPosRankSum=0.802;VQSLOD=-0.2730;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:25:49.57:0,50,466	0/1:3,1:4:22.20:41,0,22	0/1:2,0:0:0:0,0,0	0/0:6,0:3:0.47:0,0,1	0/1:13,0:13:9.93:10,0,151	0/1:13,0:10:5.71:6,0,97	0/0:9,0:6:14.97:0,15,142	0/0:17,0:17:10.93:0,11,235	1/1:7,0:7:7.04:52,7,0	0/0:11,0:10:22.02:0,22,128	0/1:10,0:12:1.84:2,0,183	0/1:10,0:10:1.62:2,0,84	0/1:5,4:9:15.32:15,0,50	0/0:6,0:6:11.97:0,12,56	0/0:7,0:5:7.23:0,7,50	0/0:13,0:10:24.60:0,25,183	0/1:27,1:26:9.09:9,0,293	0/1:8,0:6:58.43:67,0,58	0/0:20,0:14:12.85:0,13,156	0/0:11,0:10:28.57:0,29,183	0/0:4,0:3:3.48:0,3,31	0/1:6,0:6:5.78:6,0,45	0/1:3,0:3:17.23:17,0,36	0/0:9,0:7:4.54:0,5,27	0/0:12,0:11:29.02:0,29,238	0/0:13,1:13:9.25:0,9,189	0/0:16,0:13:1.25:0,1,126	0/1:10,0:5:11.15:11,0,33
chr10	63346164	.	C	CTGT	4361.51	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-9.267;DP=385;FS=0.491;HRun=0;HaplotypeScore=53.5429;InbreedingCoeff=0.9651;MQ=64.60;MQ0=1;MQRankSum=0.030;QD=36.65;ReadPosRankSum=0.248;VQSLOD=5.1750;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,20:25:48.16:936,48,0	1/1:4,5:9:15.05:295,15,0	0/0:15,0:13:12.04:0,12,168	0/0:15,0:9:14.51:0,15,134	1/1:7,14:21:39.13:777,39,0	0/0:20,0:20:54.15:0,54,739	0/0:15,0:15:33.08:0,33,445	1/1:9,13:23:45.11:727,45,0	0/0:10,0:10:18.06:0,18,254	0/0:9,0:9:21.06:0,21,282	0/0:12,0:12:36.11:0,36,489	0/0:8,0:8:21.01:0,21,251	0/0:6,0:6:15.04:0,15,195	0/0:3,0:4:11.99:0,12,130	0/0:11,0:9:24.05:0,24,317	0/0:6,0:6:18.06:0,18,253	1/1:3,23:26:48.16:963,48,0	1/1:1,14:15:33.58:663,34,0	0/0:14,0:13:36.09:0,36,469	0/0:22,0:22:51.12:0,51,650	0/0:6,0:6:18.06:0,18,254	0/0:8,0:8:18.06:0,18,253	0/0:10,0:10:24.05:0,24,304	0/0:13,0:15:24.19:0,24,492	0/0:16,0:16:45.15:0,45,634	0/0:21,0:21:54.17:0,54,747	0/0:14,0:14:33.11:0,33,465	0/0:8,0:8:15.05:0,15,212
chr10	63346669	.	AGAATGAATGAAT	A	9786.34	PASS	AB=0.716;AC=36;AF=0.643;AN=56;BaseQRankSum=7.901;DP=534;FS=2.236;HRun=0;HaplotypeScore=175.0173;InbreedingCoeff=0.5477;MQ=65.82;MQ0=2;MQRankSum=-5.921;QD=25.75;ReadPosRankSum=1.812;VQSLOD=3.7437;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:57.18:0,57,2738	1/1:1,0:4:1.39:3,1,0	0/0:27,0:23:2.98:0,3,61	0/0:16,0:13:6.02:0,6,172	0/0:14,0:14:27.09:0,27,1301	1/1:4,15:19:33.04:1053,33,0	1/1:10,5:15:6.02:205,6,0	0/0:25,0:25:8.42:0,8,83	1/1:7,11:18:21.07:725,21,0	1/1:8,11:19:33.10:1030,33,0	1/1:7,6:13:11.87:241,12,0	1/1:11,17:28:15.05:517,15,0	0/0:7,0:12:5.99:0,6,70	1/1:5,12:17:18.05:480,18,0	1/1:12,10:22:15.05:518,15,0	1/1:13,13:26:33.11:1139,33,0	0/1:11,0:26:1.02:1,0,32	0/0:6,0:12:2.01:0,2,37	1/1:19,4:23:8.99:100,9,0	1/1:9,11:20:30.01:869,30,0	1/1:25,1:26:23.95:415,24,0	0/1:5,0:12:2.06:2,0,60	0/1:6,0:18:6.60:7,0,57	0/0:9,0:17:3.01:0,3,38	1/1:3,7:10:6.02:207,6,0	1/1:26,0:26:1.91:729,2,0	1/1:7,17:23:32.94:916,33,0	0/1:14,0:14:21.91:629,0,22
chr10	63346702	.	GAATGAATGAATA	G	8200.98	PASS	AB=1.000;AC=20;AF=0.357;AN=56;BaseQRankSum=11.217;DP=447;FS=0.445;HRun=0;HaplotypeScore=148.3179;InbreedingCoeff=-0.1625;MQ=53.37;MQ0=0;MQRankSum=-5.112;QD=27.99;ReadPosRankSum=7.434;VQSLOD=3.4739;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:72.18:0,72,3094	0/0:7,0:7:15.77:0,16,161	0/0:4,0:4:12.04:0,12,144	0/0:12,0:7:17.54:0,18,236	0/0:14,0:14:41.83:0,42,1495	0/1:24,0:24:99:786,0,155	0/1:18,0:18:99:120,0,255	0/1:23,0:22:33.86:34,0,518	0/1:14,0:14:35.90:562,0,36	0/1:16,0:16:79.84:750,0,80	0/1:7,0:7:17.78:160,0,18	0/1:23,0:23:99:388,0,135	0/0:8,0:8:12.02:0,12,185	1/1:13,0:13:0.02:339,0,0	0/1:17,0:17:99:386,0,134	0/1:16,0:16:29.85:886,0,30	0/0:20,0:20:0.50:0,0,63	0/0:11,0:11:13.72:0,14,98	0/0:20,0:20:12.98:0,13,293	0/1:14,0:14:40.04:635,0,40	0/1:16,0:16:99:209,0,115	0/1:11,0:11:2.28:2,0,152	0/0:17,0:17:10.37:0,10,137	0/0:15,0:14:20.98:0,21,255	0/1:10,0:10:68.95:152,0,69	1/1:1,28:29:80.50:1350,81,0	0/1:23,0:22:72.24:656,0,72	1/1:2,17:19:21.07:785,21,0
chr10	63346884	.	C	CAATAAAATAAAATAA	8965.03	PASS	AB=1.000;AC=34;AF=0.739;AN=46;BaseQRankSum=-1.277;DP=407;FS=7.717;HRun=0;HaplotypeScore=162.8441;InbreedingCoeff=0.5813;MQ=81.28;MQ0=7;MQRankSum=-3.824;QD=27.67;ReadPosRankSum=-3.019;VQSLOD=2.7440;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:19:18.06:821,18,0	1/1:11,0:11:6.02:268,6,0	0/1:29,0:19:0.05:0,0,28	0/1:48,0:24:0.80:1,0,9	1/1:13,0:13:9.03:477,9,0	1/1:13,2:16:6.02:427,6,0	./.	1/1:57,0:55:99:3498,108,0	0/0:4,0:8:12.04:0,12,369	./.	1/1:15,0:15:6.02:243,6,0	1/1:5,0:5:3.01:214,3,0	./.	./.	1/1:6,0:6:3.01:214,3,0	1/1:9,0:9:2.98:21,3,0	1/1:15,0:15:9.02:286,9,0	1/1:17,0:17:26.97:797,27,0	1/1:17,1:24:24.05:807,24,0	1/1:15,0:15:9.03:333,9,0	1/1:4,0:4:3.01:95,3,0	./.	0/0:4,0:5:3.01:0,3,105	0/0:5,0:8:6.02:0,6,210	1/1:9,0:9:6.02:238,6,0	0/0:11,0:11:24.08:0,24,976	1/1:12,0:12:9.01:227,9,0	0/0:19,0:19:24.01:0,24,610
chr10	63347122	.	T	TGG	1584.11	PASS	AB=0.902;AC=26;AF=0.464;AN=56;BaseQRankSum=-4.618;DP=333;FS=52.073;HRun=0;HaplotypeScore=73.2046;InbreedingCoeff=-0.6421;MQ=50.09;MQ0=14;MQRankSum=3.122;QD=5.80;ReadPosRankSum=1.677;VQSLOD=0.8826;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:19:18.63:19,0,160	0/1:4,0:3:11.01:11,0,27	0/0:29,0:6:17.82:0,18,151	0/0:26,0:7:6.31:0,6,124	0/1:9,1:10:22.35:77,0,22	0/1:13,1:14:38.52:39,0,199	1/1:4,3:7:12.02:158,12,0	0/1:18,0:17:99:105,0,142	0/0:5,0:5:15.05:0,15,188	0/1:8,1:9:58.48:105,0,58	0/1:5,2:7:0.70:138,0,1	0/1:8,5:14:27.47:92,0,27	0/1:14,1:14:53.70:54,0,241	0/1:10,0:10:1.13:1,0,183	0/1:9,2:11:58.45:58,0,68	0/1:7,3:7:99:107,0,99	0/1:10,3:12:51.91:52,0,181	0/1:6,2:6:70.31:70,0,90	0/1:16,2:17:99:145,0,207	0/1:6,0:5:50.58:51,0,75	0/1:2,0:2:7.86:8,0,22	0/1:7,0:8:65.17:71,0,65	0/1:8,0:8:25.37:53,0,25	0/1:18,0:17:30.11:30,0,97	0/1:5,1:6:4.65:63,0,5	0/1:9,0:9:58.89:59,0,114	0/1:8,4:11:99:117,0,109	0/1:11,1:12:54.85:55,0,135
chr10	63347123	.	T	TGG	752.22	PASS	AB=0.920;AC=21;AF=0.375;AN=56;BaseQRankSum=-3.031;DP=327;FS=35.085;HRun=0;HaplotypeScore=74.6025;InbreedingCoeff=-0.3913;MQ=49.74;MQ0=14;MQRankSum=1.024;QD=3.48;ReadPosRankSum=0.648;VQSLOD=0.5383;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:19,4:19:1.37:1,0,150	0/1:3,1:3:31.60:35,0,32	0/0:25,0:5:14.88:0,15,124	0/0:26,0:7:16.68:0,17,136	0/1:9,1:10:40.96:68,0,41	0/0:16,0:16:26.58:0,27,282	1/1:7,0:7:10.09:38,10,0	0/1:18,1:17:45.29:45,0,206	0/0:5,0:5:15.05:0,15,185	0/1:11,0:11:36.20:36,0,111	0/1:7,0:7:15.41:31,0,15	0/0:14,0:14:0.34:0,0,73	0/1:13,2:14:86.75:87,0,144	0/0:10,0:10:20.23:0,20,214	0/1:10,0:10:15.48:15,0,78	0/1:10,0:7:1.66:2,0,120	0/0:13,0:12:12.58:0,13,227	0/1:8,0:6:24.16:24,0,97	0/1:16,1:16:59.05:59,0,237	0/1:6,0:5:0.84:1,0,82	0/0:2,0:2:4.56:0,5,40	0/1:7,1:8:40.41:84,0,40	0/1:5,3:8:4.02:133,0,4	0/1:14,3:16:38.64:39,0,80	0/1:6,0:6:7.05:7,0,14	0/1:6,3:9:99:129,0,105	0/1:10,0:9:17.30:17,0,118	0/1:10,1:11:53.97:54,0,169
chr10	63350121	.	ATC	A	4295.57	PASS	AB=0.606;AC=46;AF=0.821;AN=56;BaseQRankSum=-0.318;DP=525;FS=13.550;HRun=0;HaplotypeScore=95.4720;InbreedingCoeff=0.2232;MQ=64.90;MQ0=50;MQRankSum=1.809;QD=10.40;ReadPosRankSum=6.274;VQSLOD=3.1975;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,7:9:12.04:148,12,0	1/1:2,8:9:11.97:129,12,0	0/0:53,0:34:40.52:0,41,548	0/0:59,0:34:18.21:0,18,579	1/1:7,17:20:21.07:258,21,0	1/1:4,11:14:2.16:168,2,0	1/1:5,12:17:27.08:329,27,0	1/1:8,17:25:45.09:507,45,0	1/1:4,9:12:12.03:148,12,0	1/1:9,12:19:27.07:316,27,0	1/1:2,6:6:9.03:110,9,0	0/1:7,14:16:3.78:91,0,4	0/1:7,10:17:4.25:97,0,4	0/1:5,11:16:10.49:60,0,10	1/1:4,17:18:0.64:98,1,0	0/1:2,10:11:0.17:99,0,0	1/1:6,10:13:15.05:184,15,0	1/1:3,9:11:17.73:194,18,0	1/1:4,5:9:12.03:137,12,0	0/1:4,6:10:30.90:31,0,43	1/1:9,16:19:27.08:332,27,0	1/1:6,11:14:11.71:147,12,0	1/1:5,5:9:14.86:148,15,0	1/1:4,10:10:5.93:74,6,0	1/1:4,16:19:3.01:30,3,0	0/1:6,7:11:8.49:131,0,8	1/1:4,13:15:15.05:184,15,0	1/1:4,9:12:12.04:145,12,0
chr10	63350552	.	CTCCAGAA	C	3198.69	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=3.835;DP=648;FS=8.133;HRun=0;HaplotypeScore=169.5434;InbreedingCoeff=0.9584;MQ=81.67;MQ0=0;MQRankSum=-10.360;QD=54.22;ReadPosRankSum=1.742;VQSLOD=3.3024;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,114,4270	1/1:2,4:6:12.04:317,12,0	0/0:22,0:22:60.20:0,60,2191	0/0:21,0:21:63.22:0,63,2229	0/0:13,0:13:39.13:0,39,1490	0/0:16,0:16:48.13:0,48,1702	0/0:36,0:36:99:0,108,4304	1/1:4,17:21:51.13:1283,51,0	0/0:29,0:29:87.30:0,87,3452	0/0:22,0:22:66.23:0,66,2626	0/0:9,0:9:24.08:0,24,880	0/0:31,0:31:90.30:0,90,3543	0/0:23,0:23:69.22:0,69,2696	0/0:30,0:30:90.31:0,90,3376	0/0:34,0:34:99:0,102,3865	0/0:25,0:25:75.26:0,75,2898	1/1:2,16:18:32.85:889,33,0	1/1:0,13:14:10.59:864,11,0	0/0:26,0:26:78.27:0,78,3008	0/0:19,0:19:54.17:0,54,1940	0/0:54,0:54:99:0,157,6194	0/0:18,0:18:51.18:0,51,2087	0/0:6,0:6:15.05:0,15,615	0/0:41,0:41:99:0,117,4614	0/0:17,0:17:51.18:0,51,2021	0/0:24,0:24:72.24:0,72,2764	0/0:31,0:31:93.31:0,93,3640	0/0:3,0:3:9.03:0,9,340
chr10	63351841	.	C	CTCATTCAT	4392.95	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=2.127;DP=687;FS=2.459;HRun=0;HaplotypeScore=174.6807;InbreedingCoeff=0.9604;MQ=70.33;MQ0=1;MQRankSum=-5.766;QD=25.25;ReadPosRankSum=-3.650;VQSLOD=4.0964;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,27:37:27.43:888,27,0	0/0:5,0:13:17.95:0,18,295	0/0:20,0:18:12.04:0,12,185	0/0:25,0:23:9.03:0,9,118	1/1:8,31:39:52.39:1086,52,0	0/0:22,0:22:54.17:0,54,1170	0/0:28,0:28:48.14:0,48,1059	0/0:35,0:35:42.09:0,42,540	0/0:21,0:21:48.11:0,48,1024	0/0:27,0:27:45.15:0,45,1048	0/0:20,0:20:39.13:0,39,951	0/0:26,0:26:63.20:0,63,1497	1/1:6,15:22:27.09:1099,27,0	0/0:23,0:24:57.20:0,57,1369	0/0:13,0:13:18.06:0,18,447	0/0:16,0:16:30.03:0,30,496	0/0:9,0:34:45.15:0,45,838	0/0:8,0:22:21.07:0,21,398	0/0:17,0:17:27.03:0,27,530	0/0:18,0:18:30.15:0,30,695	0/0:45,0:45:96.21:0,96,2017	1/1:5,0:24:39.24:299,39,0	1/1:5,13:18:22.43:854,22,0	1/1:16,18:34:7.74:167,8,0	0/0:23,0:23:54.17:0,54,1266	0/0:30,0:30:57.17:0,57,1297	0/0:22,0:21:51.03:0,51,1066	0/0:11,0:12:21.07:0,21,514
chr10	63352690	.	T	TTTAC	3181	PASS	AB=0.637;AC=22;AF=0.393;AN=56;BaseQRankSum=14.886;DP=693;FS=20.460;HRun=0;HaplotypeScore=161.3254;InbreedingCoeff=-0.4855;MQ=64.04;MQ0=5;MQRankSum=-0.244;QD=6.01;ReadPosRankSum=3.899;VQSLOD=1.4685;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:39:95.31:0,95,1686	0/0:11,0:11:17.65:0,18,316	0/1:32,0:18:17.98:18,0,567	0/0:24,0:13:24.44:0,24,234	0/0:16,0:17:45.15:0,45,813	1/1:3,0:21:31.22:256,31,0	0/1:16,0:27:87.24:87,0,544	0/0:28,0:29:71.22:0,71,1086	0/1:17,0:27:16.78:17,0,149	0/1:5,0:25:99:239,0,108	0/1:5,0:13:97.57:122,0,98	0/1:7,0:23:79.55:313,0,80	0/1:7,0:22:99:146,0,258	0/1:5,0:18:51.04:51,0,91	0/1:13,0:32:99:193,0,427	0/1:12,0:28:99:142,0,464	0/0:23,0:23:63.13:0,63,1050	0/0:16,0:19:56.55:0,57,1011	0/1:17,0:18:6.12:6,0,441	0/1:7,1:25:99:191,0,164	0/1:18,0:40:99:119,0,453	0/1:8,0:24:99:133,0,195	0/1:3,0:17:28.37:176,0,28	0/1:17,0:51:99:442,0,351	0/1:3,0:23:85.77:213,0,86	0/1:8,0:19:99:162,0,137	0/1:7,0:25:99:194,0,156	0/1:2,0:12:19.94:125,0,20
chr10	63353847	.	A	AC	9034.57	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-13.985;DP=649;FS=3.071;HRun=7;HaplotypeScore=71.7342;InbreedingCoeff=0.9979;MQ=90.30;MQ0=0;MQRankSum=-2.698;QD=27.21;ReadPosRankSum=2.026;VQSLOD=5.7606;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,102,978	0/0:14,0:14:39.06:0,39,377	0/0:32,0:32:64.83:0,65,683	0/0:24,0:24:16.97:0,17,371	0/0:23,0:23:63.09:0,63,608	1/1:4,15:19:42.13:507,42,0	1/1:2,31:33:84.04:1004,84,0	0/0:23,0:23:63.09:0,63,604	0/0:22,0:22:60.09:0,60,579	1/1:3,20:23:57.17:688,57,0	1/1:2,13:15:39.05:452,39,0	1/1:3,16:19:22.17:540,22,0	0/0:25,0:25:72.11:0,72,695	1/1:1,12:14:38.99:449,39,0	1/1:2,23:25:60.18:725,60,0	1/1:1,20:21:25.19:587,25,0	0/0:23,0:23:60.10:0,60,579	0/0:23,0:23:51.07:0,51,492	1/1:1,12:13:36.08:420,36,0	1/1:2,17:19:45.14:542,45,0	1/1:2,32:34:84.26:1015,84,0	0/0:18,0:18:51.08:0,51,491	0/0:26,0:26:66.04:0,66,617	0/0:25,0:25:60.06:0,60,573	1/1:0,22:22:48.15:580,48,0	1/1:28,1:29:79.12:498,79,0	1/1:4,21:25:63.19:759,63,0	1/1:21,0:21:38.63:267,39,0
chr10	63353852	.	C	CT	3479.30	PASS	AB=1.000;AC=24;AF=0.429;AN=56;BaseQRankSum=3.887;DP=652;FS=3.374;HRun=0;HaplotypeScore=88.7245;InbreedingCoeff=0.5335;MQ=87.57;MQ0=0;MQRankSum=-2.205;QD=10.26;ReadPosRankSum=5.668;VQSLOD=3.9627;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,111,1499	0/0:15,0:15:45.11:0,45,593	0/0:30,0:30:87.17:0,87,1106	0/0:21,0:21:55.76:0,56,705	0/0:24,0:24:68.25:0,68,911	0/1:21,0:21:52.36:83,0,52	0/1:36,0:36:47.59:176,0,48	0/0:25,0:25:69.22:0,69,930	0/0:24,0:24:72.17:0,72,935	0/1:26,0:26:82.63:83,0,120	0/1:15,0:15:17.73:80,0,18	0/1:20,0:20:25.95:98,0,26	0/0:24,0:24:72.24:0,72,1006	0/1:14,0:14:4.88:76,0,5	1/1:25,0:25:5.67:139,6,0	1/1:21,0:21:3.99:122,4,0	0/0:24,0:23:69.16:0,69,907	0/0:20,0:20:58.97:0,59,765	1/1:14,0:14:8.87:86,9,0	1/1:19,0:19:16.40:134,16,0	1/1:34,0:34:51.83:245,52,0	0/0:17,0:17:51.17:0,51,712	0/0:26,0:26:74.89:0,75,981	0/0:25,0:25:72.20:0,72,940	1/1:24,0:24:39.92:148,40,0	1/1:2,28:31:64.69:1189,65,0	1/1:23,0:23:32.93:214,33,0	1/1:0,16:16:42.12:606,42,0
chr10	63354193	.	A	ACACCTGG	2531.78	PASS	AC=8;AF=0.148;AN=54;BaseQRankSum=0.099;DP=436;FS=2.421;HRun=0;HaplotypeScore=107.2404;InbreedingCoeff=0.7606;MQ=84.43;MQ0=18;MQRankSum=-7.832;QD=26.65;ReadPosRankSum=-2.818;VQSLOD=2.4762;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:11.97:0,12,246	1/1:6,2:9:6.02:206,6,0	0/0:14,0:14:27.09:0,27,609	0/0:20,0:20:25.66:0,26,353	0/0:11,0:11:12.51:0,13,280	0/0:12,0:12:12.03:0,12,200	0/0:23,0:23:33.10:0,33,661	1/1:24,1:31:28.88:717,29,0	0/0:8,0:12:12.04:0,12,213	0/0:18,0:18:33.11:0,33,754	0/0:11,0:9:18.05:0,18,372	0/0:11,0:9:9.03:0,9,209	0/0:3,0:4:6.02:0,6,98	0/0:18,0:16:17.27:0,17,336	0/0:8,0:7:6.02:0,6,142	0/0:8,0:8:9.02:0,9,158	1/1:17,16:37:47.48:1284,47,0	1/1:8,10:18:15.02:473,15,0	0/0:11,0:11:12.04:0,12,263	0/0:13,0:13:12.04:0,12,265	0/0:46,0:39:60.14:0,60,1180	0/0:8,0:8:0.40:0,0,1	0/0:10,0:10:3.01:0,3,49	./.	0/0:16,0:12:13.29:0,13,302	0/0:15,0:15:30.10:0,30,726	0/0:10,0:10:27.09:0,27,606	0/0:7,0:7:18.04:0,18,327
chr10	63354203	.	CCTGGCACCA	C	404.89	PASS	AC=8;AF=0.148;AN=54;BaseQRankSum=3.095;DP=411;FS=7.714;HRun=0;HaplotypeScore=119.1614;InbreedingCoeff=0.8066;MQ=78.72;MQ0=18;MQRankSum=-2.096;QD=14.46;ReadPosRankSum=1.973;VQSLOD=1.7928;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:33.11:0,33,961	0/0:7,0:7:15.05:0,15,402	0/0:13,0:12:30.10:0,30,1259	0/0:17,0:17:45.07:0,45,1280	0/0:14,0:14:17.62:0,18,677	0/0:11,0:11:18.06:0,18,623	0/0:22,0:22:42.12:0,42,1664	0/0:31,0:31:90.31:0,90,2376	1/1:10,0:10:15.05:323,15,0	0/0:18,0:18:48.16:0,48,1878	0/0:11,0:9:18.06:0,18,832	0/0:13,0:11:21.33:0,21,610	1/1:2,0:3:6.02:128,6,0	0/0:19,0:17:25.33:0,25,942	0/0:7,0:6:9.03:0,9,329	0/0:5,0:5:15.01:0,15,454	0/0:33,0:33:69.49:0,69,1524	0/0:20,0:20:41.83:0,42,962	0/0:12,0:12:33.11:0,33,983	0/0:12,0:12:33.11:0,33,980	0/0:44,0:37:81.28:0,81,3092	1/1:3,3:7:0.40:0,0,0	1/1:3,5:8:3.01:73,3,0	./.	0/0:15,0:11:20.99:0,21,706	0/0:14,0:14:36.11:0,36,1515	0/0:9,0:9:27.09:0,27,1244	0/0:7,0:7:21.07:0,21,846
chr10	63354214	.	A	AGCGCG	549.26	PASS	AB=0.835;AC=13;AF=0.232;AN=56;BaseQRankSum=5.559;DP=423;FS=9.889;HRun=0;HaplotypeScore=119.7186;InbreedingCoeff=-0.0565;MQ=69.14;MQ0=21;MQRankSum=-5.540;QD=3.57;ReadPosRankSum=-0.269;VQSLOD=1.8498;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:12,0:17:41.18:41,0,75	1/1:6,0:6:2.34:10,2,0	0/0:15,0:10:27.02:0,27,326	0/0:15,0:12:12.03:0,12,166	0/0:8,0:16:12.48:0,12,144	0/0:4,0:13:12.18:0,12,73	0/0:6,0:23:30.06:0,30,218	0/1:11,0:11:20.89:21,0,211	0/0:12,0:12:10.11:0,10,76	0/0:9,0:16:34.52:0,35,334	0/0:6,0:10:16.37:0,16,175	0/0:6,0:15:10.08:0,10,95	0/0:3,0:3:4.83:0,5,48	0/1:6,0:17:10.85:11,0,90	0/0:5,0:6:5.68:0,6,81	0/1:5,0:6:14.57:15,0,29	0/1:22,0:31:64.85:65,0,81	0/1:18,0:20:51.85:179,0,52	0/0:5,0:13:16.68:0,17,139	0/0:3,0:9:11.05:0,11,113	0/0:16,0:44:47.79:0,48,432	1/1:8,0:8:1.91:6,2,0	0/1:8,0:8:10.97:42,0,11	0/0:16,0:15:0:0,0,0	0/0:5,0:14:0.33:0,0,45	0/1:8,1:19:99:168,0,219	0/0:9,0:9:20.05:0,20,230	0/1:7,0:7:99:133,0,104
chr10	63354220	.	G	GCA	1181.31	PASS	AB=1.000;AC=22;AF=0.393;AN=56;BaseQRankSum=0.161;DP=403;FS=45.839;HRun=0;HaplotypeScore=86.8258;InbreedingCoeff=-0.0565;MQ=48.60;MQ0=25;MQRankSum=3.437;QD=4.14;ReadPosRankSum=6.661;VQSLOD=0.0628;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:14:2.90:16,3,0	0/0:7,0:7:5.48:0,5,32	0/0:15,0:2:4.26:0,4,47	0/0:16,0:4:2.84:0,3,15	0/0:14,0:14:0.47:0,0,1	1/1:14,0:14:10.74:124,11,0	0/1:24,0:24:20.41:213,0,20	0/0:8,0:8:8.12:0,8,47	1/1:6,5:11:8.96:113,9,0	0/1:16,0:16:86.64:95,0,87	0/1:11,0:9:48.89:50,0,49	0/1:18,0:16:11.97:51,0,12	0/0:3,0:3:2.99:0,3,23	0/1:19,0:16:7.71:104,0,8	0/0:7,0:6:5.95:0,6,44	1/1:5,0:5:5.45:51,5,0	0/0:28,0:28:6.90:0,7,52	0/1:23,0:23:17.85:18,0,156	0/1:12,0:12:42.97:147,0,43	1/1:8,0:8:3.01:30,3,0	0/1:54,0:45:99:243,0,111	0/0:8,0:8:2.13:0,2,10	0/0:7,0:7:2.80:0,3,13	0/1:14,0:13:0.10:0,0,0	0/1:18,0:14:5.58:54,0,6	0/1:15,0:15:10.85:11,0,75	0/1:8,0:8:11.96:12,0,61	0/0:5,0:5:10.98:0,11,58
chr10	63355323	.	T	TG	2909.61	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-0.946;DP=541;FS=1.466;HRun=6;HaplotypeScore=54.1968;InbreedingCoeff=0.9924;MQ=62.79;MQ0=3;MQRankSum=-0.789;QD=30.63;ReadPosRankSum=1.435;VQSLOD=4.2738;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:75.17:0,75,765	0/0:10,0:10:24.05:0,24,243	0/0:11,0:8:18.04:0,18,183	0/0:10,0:8:18.04:0,18,184	0/0:32,0:32:87.20:0,87,887	0/0:20,0:20:54.12:0,54,551	0/0:26,0:26:63.14:0,63,643	0/0:16,0:16:36.07:0,36,367	1/1:1,14:15:36.12:453,36,0	0/0:18,0:18:51.10:0,51,513	0/0:18,0:18:42.09:0,42,428	0/0:17,0:17:51.10:0,51,514	1/1:2,7:9:24.08:297,24,0	0/0:14,0:14:42.10:0,42,428	0/0:22,0:22:60.14:0,60,612	0/0:13,0:13:36.06:0,36,361	0/0:35,0:34:96.19:0,96,970	0/0:25,0:25:72.16:0,72,734	0/0:19,0:19:51.09:0,51,511	0/0:16,0:16:42.09:0,42,428	0/0:36,0:36:78.17:0,78,796	1/1:3,18:21:45.14:566,45,0	1/1:3,20:23:63.20:788,63,0	1/1:0,27:27:78.25:981,78,0	0/0:7,0:7:18.04:0,18,183	0/0:26,0:25:69.16:0,69,704	0/0:18,0:18:51.11:0,51,520	0/0:8,0:8:21.04:0,21,214
chr10	63355411	.	CA	C	5195.18	PASS	AB=0.888;AC=44;AF=0.786;AN=56;BaseQRankSum=-6.169;DP=514;FS=2.268;HRun=12;HaplotypeScore=85.9755;InbreedingCoeff=0.4614;MQ=58.71;MQ0=20;MQRankSum=4.091;QD=11.97;ReadPosRankSum=1.473;VQSLOD=4.9449;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,1:31:17.28:0,17,167	1/1:0,6:6:11.95:93,12,0	0/1:32,0:13:27.30:27,0,97	0/0:12,0:1:3:0,3,26	0/0:17,1:17:10.52:0,11,93	1/1:2,11:13:26.90:209,27,0	1/1:4,18:22:40.54:385,41,0	1/1:5,16:21:46.95:334,47,0	0/0:19,0:18:36.04:0,36,227	1/1:1,11:12:27.31:204,27,0	1/1:3,12:14:29.88:232,30,0	1/1:3,12:15:32.24:288,32,0	1/1:17,0:17:6.09:48,6,0	1/1:2,14:16:35.82:279,36,0	1/1:4,11:14:17.93:139,18,0	1/1:3,10:13:29.88:232,30,0	1/1:5,28:32:63.63:487,64,0	1/1:12,22:34:62.70:481,63,0	1/1:2,17:19:47.45:352,47,0	1/1:4,15:19:5.43:225,5,0	1/1:3,18:20:8.52:248,9,0	0/1:17,0:17:15.17:21,0,15	1/1:13,0:13:1.07:33,1,0	0/1:18,0:18:13.13:29,0,13	0/1:3,12:16:1.52:163,0,2	1/1:3,19:22:55.74:373,56,0	1/1:4,12:16:26.89:209,27,0	1/1:2,5:6:6.62:105,7,0
chr10	63355413	.	A	AC	1220.92	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=11.773;DP=520;FS=1.001;HRun=0;HaplotypeScore=103.4271;InbreedingCoeff=0.9624;MQ=59.49;MQ0=20;MQRankSum=-10.310;QD=14.53;ReadPosRankSum=-0.678;VQSLOD=4.9568;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:78.15:0,78,986	0/0:6,0:6:11.92:0,12,88	0/0:36,0:15:18.69:0,19,146	0/0:13,0:2:5.81:0,6,48	0/0:19,0:18:44.58:0,45,510	0/0:13,0:13:29.90:0,30,230	0/0:24,0:23:56.21:0,56,419	0/0:20,0:20:42.18:0,42,350	1/1:4,3:19:41.85:227,42,0	0/0:14,0:14:29.91:0,30,236	0/0:16,0:15:35.88:0,36,279	0/0:14,0:14:41.87:0,42,338	1/1:6,12:18:41.21:341,41,0	0/0:17,0:17:41.75:0,42,308	0/0:14,0:13:23.94:0,24,190	0/0:12,0:12:35.88:0,36,279	0/0:33,0:32:70.16:0,70,508	0/0:34,0:34:79.23:0,79,584	0/0:19,0:19:53.08:0,53,396	0/0:18,0:18:41.25:0,41,324	0/0:21,0:20:41.83:0,42,332	1/1:10,7:17:33.23:236,33,0	1/1:1,11:12:32.77:273,33,0	1/1:5,12:17:20.30:318,20,0	0/0:16,0:16:35.81:0,36,286	0/0:24,0:24:31.19:0,31,364	0/0:16,0:16:35.87:0,36,274	0/0:7,0:6:17.92:0,18,150
chr10	63355414	.	A	AAC	670.43	PASS	AB=0.988;AC=10;AF=0.179;AN=56;BaseQRankSum=11.059;DP=523;FS=5.268;HRun=0;HaplotypeScore=116.7695;InbreedingCoeff=0.6570;MQ=61.23;MQ0=20;MQRankSum=-10.972;QD=5.45;ReadPosRankSum=1.326;VQSLOD=2.5891;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:80.90:0,81,1112	0/0:6,0:6:12.01:0,12,111	0/1:40,0:17:28.86:29,0,85	0/0:15,0:3:4.26:0,4,43	0/0:20,0:19:48.04:0,48,627	0/0:13,0:13:30.02:0,30,275	0/0:23,0:22:59.73:0,60,535	0/0:19,0:19:53.01:0,53,457	0/1:20,0:19:15.87:16,0,17	0/0:15,0:15:34.29:0,34,315	0/0:16,0:15:39.04:0,39,358	0/0:15,0:15:42.06:0,42,412	1/1:6,12:18:27.09:241,27,0	0/0:17,0:17:41.97:0,42,374	0/0:13,0:12:18.02:0,18,167	0/0:12,0:12:33.04:0,33,305	0/0:33,0:32:60.98:0,61,616	0/0:35,0:35:80.92:0,81,724	0/0:19,0:19:51.02:0,51,474	0/0:17,0:17:38.92:0,39,366	0/0:21,0:20:39.05:0,39,380	1/1:9,7:16:2.74:132,3,0	1/1:0,11:11:31.47:211,31,0	1/1:5,12:17:8.59:198,9,0	0/0:16,0:16:35.99:0,36,337	0/0:24,0:24:66.86:0,67,548	0/0:14,0:14:30.01:0,30,272	0/0:7,0:6:18.03:0,18,182
chr10	63355423	.	ATTTT	A	2639.17	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=9.921;DP=520;FS=3.015;HRun=8;HaplotypeScore=127.0935;InbreedingCoeff=0.9895;MQ=67.61;MQ0=13;MQRankSum=-11.521;QD=33.84;ReadPosRankSum=1.151;VQSLOD=1.3394;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:27:72.25:0,72,1762	0/0:7,0:7:15.05:0,15,317	0/0:48,0:22:49.24:0,49,1040	0/0:19,0:6:15.05:0,15,326	0/0:17,0:17:48.16:0,48,1141	0/0:12,0:12:30.10:0,30,652	0/0:21,0:21:60.21:0,60,1292	0/0:21,0:21:59.15:0,59,1131	1/1:3,15:17:48.10:599,48,0	0/0:16,0:16:39.60:0,40,838	0/0:14,0:14:36.12:0,36,781	0/0:16,0:16:48.14:0,48,1020	1/1:0,19:19:51.15:765,51,0	0/0:15,0:15:36.12:0,36,773	0/0:13,0:13:24.08:0,24,543	0/0:11,0:11:33.11:0,33,725	0/0:34,0:34:78.27:0,78,1661	0/0:31,0:31:72.05:0,72,1483	0/0:18,0:18:51.17:0,51,1073	0/0:18,0:18:42.14:0,42,927	0/0:27,0:27:63.22:0,63,1441	1/1:1,12:13:35.97:569,36,0	1/1:2,10:12:29.87:437,30,0	1/1:5,11:16:29.85:444,30,0	0/0:15,0:15:33.11:0,33,744	0/0:23,0:23:65.59:0,66,1339	0/0:13,0:13:27.09:0,27,575	0/0:6,0:6:18.06:0,18,387
chr10	63356021	.	A	AGG	9745.04	PASS	AB=1.000;AC=43;AF=0.768;AN=56;BaseQRankSum=-10.640;DP=506;FS=5.229;HRun=7;HaplotypeScore=81.8579;InbreedingCoeff=0.8692;MQ=81.78;MQ0=0;MQRankSum=-2.524;QD=23.94;ReadPosRankSum=2.859;VQSLOD=3.8953;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,25:34:48.16:783,48,0	1/1:2,0:4:3.01:32,3,0	0/1:31,0:20:1.01:1,0,240	0/0:28,0:22:38.82:0,39,290	1/1:4,22:26:45.02:647,45,0	1/1:3,14:19:36.12:583,36,0	1/1:2,19:23:39.13:633,39,0	1/1:10,0:17:18.03:190,18,0	0/0:16,0:16:45.10:0,45,509	1/1:5,18:23:45.12:695,45,0	1/1:5,7:14:24.08:367,24,0	1/1:4,16:20:36.10:588,36,0	0/0:6,0:6:15.92:0,16,166	1/1:2,14:19:35.48:546,35,0	1/1:4,9:15:24.08:391,24,0	1/1:1,12:15:21.07:343,21,0	1/1:6,0:13:24.47:228,24,0	1/1:6,0:14:5.31:134,5,0	1/1:4,11:18:41.50:620,41,0	1/1:5,15:21:33.07:493,33,0	1/1:3,12:16:20.97:343,21,0	0/0:21,0:21:53.80:0,54,584	0/0:13,0:13:39.11:0,39,446	0/0:15,0:15:42.10:0,42,477	1/1:3,17:20:39.13:636,39,0	1/1:4,16:20:45.61:711,46,0	1/1:4,16:20:42.14:685,42,0	1/1:0,4:4:6.02:98,6,0
chr10	63356515	.	C	CCTAGCAGACAAACTTTTCT	12890.64	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=1.351;DP=690;FS=6.600;HRun=0;HaplotypeScore=324.9607;InbreedingCoeff=0.9987;MQ=76.89;MQ0=0;MQRankSum=-12.496;QD=149.89;ReadPosRankSum=-1.432;VQSLOD=3.7200;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,129,6306	0/0:7,0:7:21.06:0,21,924	0/0:23,0:23:66.23:0,66,2567	0/0:18,0:18:48.16:0,48,1955	0/0:18,0:18:54.17:0,54,2495	0/0:14,0:14:39.13:0,39,2038	0/0:34,0:34:96.33:0,96,4968	0/0:24,0:24:66.22:0,66,2770	0/0:27,0:27:81.28:0,81,4255	0/0:33,0:33:93.78:0,94,4576	0/0:15,0:15:45.14:0,45,2072	0/0:31,0:31:93.31:0,93,4684	1/1:10,5:16:39.13:3099,39,0	0/0:16,0:16:45.15:0,45,2268	0/0:23,0:23:69.24:0,69,3434	0/0:28,0:28:75.26:0,75,4020	0/0:30,0:30:87.28:0,87,4381	0/0:23,0:23:63.16:0,63,2802	0/0:18,0:18:54.19:0,54,2433	0/0:31,0:31:90.31:0,90,4544	0/0:43,0:43:99:0,129,6515	1/1:8,7:17:39.13:2751,39,0	1/1:13,4:18:39.13:2286,39,0	1/1:19,8:35:60.21:4755,60,0	0/0:25,0:25:72.25:0,72,3117	0/0:26,0:26:78.27:0,78,4140	0/0:41,0:40:99:0,120,5263	0/0:11,0:11:33.11:0,33,1712
chr10	63356821	.	GA	G	2210.80	PASS	AB=0.694;AC=30;AF=0.536;AN=56;BaseQRankSum=3.435;DP=485;FS=6.741;HRun=14;HaplotypeScore=65.5312;InbreedingCoeff=0.4249;MQ=56.49;MQ0=14;MQRankSum=-0.545;QD=7.00;ReadPosRankSum=4.356;VQSLOD=2.5098;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,23:36:10.85:335,11,0	0/0:6,0:6:6:0,6,52	0/0:26,0:6:14.72:0,15,102	0/0:23,1:7:10.44:0,10,68	1/1:2,15:16:21.55:145,22,0	1/1:2,9:11:27.63:187,28,0	0/1:4,11:16:7.97:89,0,8	0/0:21,0:21:38.78:0,39,327	0/0:21,1:22:33.29:0,33,431	1/1:5,14:18:31.81:208,32,0	1/1:8,10:18:29.03:186,29,0	1/1:6,6:13:7.92:47,8,0	0/0:10,0:8:0.08:0,0,2	1/1:1,5:6:10.96:67,11,0	0/1:9,14:23:15.27:187,0,15	0/1:8,10:18:15.92:100,0,16	0/0:24,3:28:0.83:0,1,396	0/0:14,0:14:35.98:0,36,320	0/1:9,4:14:21.42:54,0,21	1/1:9,7:17:12.97:86,13,0	1/1:5,8:14:16.78:108,17,0	0/0:4,0:3:0.47:0,0,1	0/0:9,0:9:1.97:0,2,5	0/1:10,0:11:0.31:0,0,2	1/1:9,16:24:6.88:183,7,0	1/1:15,11:25:41.52:287,42,0	0/1:8,14:22:28.34:99,0,28	1/1:7,1:6:2.88:19,3,0
chr10	63356833	.	AAAG	A	699.62	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=5.846;DP=523;FS=4.541;HRun=0;HaplotypeScore=88.2907;InbreedingCoeff=0.9072;MQ=63.65;MQ0=11;MQRankSum=0.124;QD=14.89;ReadPosRankSum=-4.924;VQSLOD=1.7310;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:77.90:0,78,678	0/0:5,0:5:15.04:0,15,220	0/0:44,0:16:20.46:0,20,298	0/0:38,0:12:4.96:0,5,108	0/0:20,0:19:7.23:0,7,267	0/0:14,0:14:39.44:0,39,344	0/0:14,0:14:13.50:0,13,196	0/0:28,0:27:45.23:0,45,953	0/0:21,0:21:63.12:0,63,1028	0/0:20,0:19:50.38:0,50,414	0/0:19,0:18:31.40:0,31,375	0/0:11,0:11:14.05:0,14,89	1/1:9,2:10:26.86:209,27,0	0/0:11,0:11:16.90:0,17,184	0/0:21,0:20:44.86:0,45,398	0/0:13,0:13:26.99:0,27,276	0/0:24,0:24:59.10:0,59,958	0/0:16,0:16:42.05:0,42,705	0/0:17,0:16:37.81:0,38,318	0/0:17,0:17:33.96:0,34,305	0/0:15,0:15:34.79:0,35,263	1/1:6,0:5:11.91:99,12,0	1/1:10,2:12:23.85:189,24,0	1/1:17,1:18:41.20:359,41,0	0/0:22,0:20:37.82:0,38,333	0/0:23,0:22:55.89:0,56,469	0/0:20,0:20:35.87:0,36,364	0/0:6,0:4:12.01:0,12,129
chr10	63356834	.	AAG	A	695.54	PASS	AB=1.000;AC=10;AF=0.179;AN=56;BaseQRankSum=6.934;DP=520;FS=9.701;HRun=0;HaplotypeScore=79.4100;InbreedingCoeff=0.7613;MQ=64.60;MQ0=11;MQRankSum=0.429;QD=6.56;ReadPosRankSum=-4.690;VQSLOD=0.2713;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:66.55:0,67,461	0/0:5,0:5:15.03:0,15,181	0/0:46,0:18:12.60:0,13,255	0/1:38,0:12:2.29:2,0,78	0/1:21,0:20:10.17:10,0,203	0/0:13,0:13:37.55:0,38,235	0/0:14,0:14:22.39:0,22,145	0/0:28,0:27:44.50:0,44,780	0/0:21,0:21:62.95:0,63,808	0/0:20,0:19:44.28:0,44,297	0/0:19,0:18:19.99:0,20,235	0/0:10,0:10:7.61:0,8,55	1/1:10,1:10:26.93:230,27,0	0/0:11,0:11:24.98:0,25,154	0/0:19,0:18:42.70:0,43,264	0/0:13,0:13:26.01:0,26,185	0/0:24,0:24:61.76:0,62,777	0/0:17,0:17:45:0,45,589	0/0:16,0:15:15.50:0,15,246	0/0:15,0:15:29.19:0,29,224	0/0:15,0:15:24.50:0,24,188	1/1:6,0:5:11.81:80,12,0	1/1:9,3:12:23.77:169,24,0	1/1:17,1:18:42.32:365,42,0	0/0:21,0:19:27.88:0,28,190	0/0:23,0:22:53.31:0,53,318	0/0:20,0:20:34.20:0,34,254	0/0:7,0:5:14.71:0,15,106
chr10	63356841	.	G	GA	1152.40	PASS	AB=0.680;AC=11;AF=0.196;AN=56;BaseQRankSum=2.748;DP=522;FS=0.572;HRun=9;HaplotypeScore=66.9000;InbreedingCoeff=0.8181;MQ=67.34;MQ0=11;MQRankSum=-0.951;QD=15.57;ReadPosRankSum=-1.224;VQSLOD=3.5479;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:74.95:0,75,646	0/0:6,0:6:14.98:0,15,127	0/0:50,0:21:46.15:0,46,348	0/0:40,0:14:1.75:0,2,111	0/0:20,0:19:30.21:0,30,304	0/0:14,0:14:41.99:0,42,362	0/0:17,0:17:35.99:0,36,312	0/0:31,0:30:77.98:0,78,677	0/0:21,0:21:56.97:0,57,494	0/0:20,0:19:50.97:0,51,443	0/0:17,0:16:38.99:0,39,338	0/0:12,0:12:14.99:0,15,130	1/1:6,3:8:17.23:150,17,0	0/0:12,0:12:26.98:0,27,234	0/0:15,0:14:23.96:0,24,208	0/0:10,0:10:4.10:0,4,162	0/0:23,0:23:53.98:0,54,467	0/0:20,0:20:44.93:0,45,383	0/0:15,0:14:32.95:0,33,280	0/0:16,0:16:41.97:0,42,361	0/0:18,0:18:32.49:0,32,285	1/1:1,5:5:9.02:94,9,0	1/1:8,4:12:18.03:181,18,0	0/1:9,8:17:5.12:136,0,5	0/0:20,0:18:23.99:0,24,208	1/1:12,12:23:34.10:596,34,0	0/0:15,0:15:35.58:0,36,312	1/1:1,5:5:15.04:166,15,0
chr10	63357335	.	C	CT	4348.28	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-9.235;DP=329;FS=2.322;HRun=9;HaplotypeScore=37.3263;InbreedingCoeff=0.9143;MQ=77.47;MQ0=1;MQRankSum=0.429;QD=28.24;ReadPosRankSum=2.509;VQSLOD=4.6671;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,19:21:31.12:571,31,0	0/0:11,0:11:32.98:0,33,283	0/0:14,0:10:23.90:0,24,198	0/0:15,0:12:3.50:0,4,95	1/1:1,15:16:43:466,43,0	1/1:1,6:7:18.05:199,18,0	1/1:0,7:7:21.06:232,21,0	0/0:27,0:27:59.97:0,60,521	0/0:7,0:7:18:0,18,156	1/1:1,7:7:21.03:221,21,0	1/1:1,6:7:18.05:197,18,0	1/1:0,10:10:27.07:299,27,0	0/0:16,0:16:41.99:0,42,364	1/1:0,3:3:9.02:100,9,0	1/1:1,5:6:15.04:166,15,0	1/1:1,14:15:39.11:431,39,0	0/0:20,0:20:50.97:0,51,443	0/0:20,0:20:53.98:0,54,468	1/1:3,7:10:21.06:232,21,0	1/1:1,8:9:24.06:264,24,0	1/1:2,5:7:15.04:166,15,0	0/0:7,0:7:21:0,21,182	0/0:9,0:10:29.03:0,29,240	0/0:1,0:1:3:0,3,26	1/1:1,9:10:4.03:273,4,0	0/0:9,0:9:23.99:0,24,208	1/1:1,17:18:48.13:531,48,0	0/0:18,0:18:32.93:0,33,281
chr10	63359005	.	A	AG	1577.53	PASS	AB=0.987;AC=28;AF=0.500;AN=56;BaseQRankSum=-3.929;DP=411;FS=7.535;HRun=0;HaplotypeScore=55.7201;InbreedingCoeff=0.5643;MQ=57.57;MQ0=17;MQRankSum=6.027;QD=6.71;ReadPosRankSum=2.307;VQSLOD=2.3224;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:25:49.93:0,50,372	0/0:8,0:8:18.87:0,19,169	0/0:21,0:9:14.55:0,15,118	0/1:20,0:9:9.54:10,0,73	0/0:19,0:17:32.76:0,33,242	1/1:9,1:10:16.71:128,17,0	1/1:22,1:22:5.06:145,5,0	0/0:25,0:19:29.49:0,29,253	0/0:11,0:11:26.89:0,27,222	1/1:14,0:14:25.08:191,25,0	1/1:13,0:13:10.46:84,10,0	1/1:16,1:15:15.91:134,16,0	0/0:7,0:5:11.92:0,12,91	0/1:9,0:8:22.78:23,0,24	1/1:14,0:12:12.94:95,13,0	1/1:11,0:11:20:130,20,0	0/0:21,0:18:24.43:0,24,153	0/0:18,0:16:28.53:0,29,189	0/1:11,1:11:6.28:105,0,6	0/1:13,0:13:12.88:79,0,13	1/1:16,1:13:16.31:101,16,0	0/0:7,0:6:14.46:0,14,109	0/0:11,0:11:24.80:0,25,152	0/1:8,0:5:0.01:0,0,0	0/1:18,0:18:15.68:61,0,16	1/1:4,16:21:31.99:363,32,0	1/1:9,0:9:6.06:105,6,0	1/1:6,0:3:2.97:24,3,0
chr10	63359444	.	T	TGCGC	582.04	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=3.026;DP=542;FS=28.369;HRun=0;HaplotypeScore=113.8995;InbreedingCoeff=0.8632;MQ=69.79;MQ0=7;MQRankSum=-1.459;QD=9.70;ReadPosRankSum=-0.769;VQSLOD=0.9062;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:48.14:0,48,691	0/0:6,0:6:9.03:0,9,127	0/0:33,0:23:62.94:0,63,1101	0/0:34,0:16:43.30:0,43,678	0/0:21,0:21:45.81:0,46,589	0/0:21,0:21:39.13:0,39,608	0/0:23,0:23:53.82:0,54,799	0/0:14,0:13:36.12:0,36,601	0/0:17,0:17:42.13:0,42,597	0/0:21,0:21:54.17:0,54,833	0/0:17,0:17:45.13:0,45,655	0/0:15,0:15:36.11:0,36,531	1/1:1,7:10:3.01:80,3,0	0/0:10,0:10:21.07:0,21,317	0/0:21,0:21:39.11:0,39,573	0/0:18,0:18:45.09:0,45,621	0/0:22,0:22:26.90:0,27,397	0/0:14,0:14:33.11:0,33,489	0/0:9,0:9:24.07:0,24,369	0/0:16,0:16:45.14:0,45,697	0/0:47,0:47:90.06:0,90,1614	1/1:2,8:13:6.02:158,6,0	1/1:2,6:12:6.02:114,6,0	1/1:5,16:25:17.77:365,18,0	0/0:20,0:19:48.15:0,48,749	0/0:20,0:20:57.19:0,57,896	0/0:15,0:14:44.58:0,45,581	0/0:18,0:18:48.16:0,48,705
chr10	63359445	.	GCA	G	2210.65	PASS	AB=0.848;AC=40;AF=0.769;AN=52;BaseQRankSum=-2.943;DP=540;FS=7.800;HRun=0;HaplotypeScore=88.5043;InbreedingCoeff=0.3557;MQ=68.81;MQ0=7;MQRankSum=1.054;QD=5.30;ReadPosRankSum=0.749;VQSLOD=1.7994;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:30:8.35:41,8,0	1/1:2,0:5:2.83:14,3,0	0/0:32,0:22:1.25:0,1,3	./.	1/1:11,0:21:19.23:89,19,0	1/1:11,10:21:14.83:143,15,0	1/1:15,6:23:20.72:192,21,0	0/1:14,0:13:0:0,0,0	1/1:12,4:17:14.87:145,15,0	1/1:17,4:21:23.87:226,24,0	0/1:8,7:17:21.02:167,0,21	1/1:11,4:15:12.03:131,12,0	1/1:10,0:10:1.09:19,1,0	1/1:6,4:10:9.02:98,9,0	1/1:17,5:22:9.02:98,9,0	1/1:8,8:18:23.62:224,24,0	1/1:14,0:22:11.36:56,11,0	0/1:11,0:13:19.27:19,0,29	./.	1/1:18,0:18:8.89:80,9,0	1/1:32,14:47:0.41:187,0,0	0/0:12,0:12:5.47:0,5,25	0/0:10,0:10:4.50:0,4,16	0/0:25,0:25:11.36:0,11,32	0/1:17,3:19:34.62:56,0,35	1/1:12,0:20:15.09:72,15,0	1/1:8,6:14:20.89:210,21,0	1/1:10,0:17:17.04:84,17,0
chr10	63360109	.	GA	G	2241.34	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=13.643;DP=699;FS=0.896;HRun=8;HaplotypeScore=75.6732;InbreedingCoeff=0.9914;MQ=82.03;MQ0=0;MQRankSum=-1.547;QD=24.36;ReadPosRankSum=3.994;VQSLOD=4.3482;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,153,1822	0/0:4,0:4:12.04:0,12,145	0/0:27,0:27:60.12:0,60,663	0/0:23,0:23:54.01:0,54,574	0/0:32,0:32:93.25:0,93,1098	0/0:27,0:27:78.19:0,78,888	0/0:24,0:24:63.17:0,63,740	0/0:31,0:31:81.23:0,81,949	0/0:22,0:22:66.20:0,66,797	0/0:32,0:33:96.13:0,96,1121	0/0:20,0:20:57.13:0,57,670	0/0:25,0:25:69.19:0,69,809	1/1:1,25:26:63.09:608,63,0	0/0:20,0:20:51.16:0,51,616	0/0:27,0:27:78.23:0,78,933	0/0:29,0:29:78.21:0,78,918	0/0:23,0:23:63.16:0,63,736	0/0:22,0:22:60.13:0,60,686	0/0:21,0:21:45.11:0,45,516	0/0:27,0:27:72.22:0,72,870	0/0:40,0:40:99:0,99,1185	1/1:0,18:18:54.09:521,54,0	1/1:1,19:20:54.09:521,54,0	1/1:1,27:28:78.12:752,78,0	0/0:16,0:16:42.13:0,42,507	0/0:26,0:26:69.21:0,69,832	0/0:23,0:23:60.18:0,60,723	0/0:13,0:13:39.12:0,39,471
chr10	63361046	.	AACACACAC	A	1960.94	PASS	AB=0.839;AC=24;AF=0.444;AN=54;BaseQRankSum=4.076;DP=495;FS=0.000;HRun=0;HaplotypeScore=129.4894;InbreedingCoeff=0.6879;MQ=60.79;MQ0=12;MQRankSum=-5.757;QD=8.49;ReadPosRankSum=1.960;VQSLOD=2.3398;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:39.11:0,39,1288	1/1:10,0:10:6.49:113,6,0	0/1:31,0:20:0:0,0,0	./.	0/0:11,0:16:6.02:0,6,204	1/1:3,8:12:8.82:143,9,0	1/1:15,3:18:6.86:52,7,0	0/0:21,0:21:3.85:0,4,12	0/0:14,0:16:18.06:0,18,607	1/1:14,0:11:6.01:90,6,0	1/1:5,4:9:5.89:37,6,0	0/0:8,0:10:5.49:0,5,33	0/0:15,0:15:21.07:0,21,720	0/0:8,0:14:8.93:0,9,65	1/1:13,8:21:11.66:265,12,0	1/1:10,5:16:15.05:352,15,0	1/1:24,0:24:12.60:191,13,0	1/1:17,0:17:9.40:221,9,0	0/0:13,0:11:0.89:0,1,2	1/1:10,0:11:13.29:290,13,0	1/1:29,0:28:4.32:23,4,0	0/0:11,0:9:21.07:0,21,642	0/0:3,0:8:9.03:0,9,303	0/0:42,0:44:38.70:0,39,1219	0/0:3,0:11:8.99:0,9,82	0/0:12,0:12:14.69:0,15,203	0/1:10,9:18:15.61:372,0,16	0/0:11,0:11:24.08:0,24,774
chr10	63361086	.	CACACACACAA	C	1927.42	PASS	AB=0.990;AC=14;AF=0.250;AN=56;BaseQRankSum=3.696;DP=612;FS=14.942;HRun=0;HaplotypeScore=172.3699;InbreedingCoeff=0.3789;MQ=61.62;MQ0=18;MQRankSum=-5.071;QD=9.64;ReadPosRankSum=1.924;VQSLOD=1.8935;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:79.90:0,80,2067	1/1:1,7:8:6.96:183,7,0	0/0:44,0:16:40.81:0,41,377	0/0:38,0:15:42.37:0,42,381	0/0:17,0:17:29.96:0,30,473	0/1:23,0:22:29.44:29,0,333	0/0:16,0:16:3.87:0,4,299	1/1:20,0:18:27.11:403,27,0	0/0:18,0:17:39.99:0,40,1282	0/1:19,0:15:45.42:45,0,373	0/0:16,0:16:18.98:0,19,276	0/0:12,0:12:23.98:0,24,300	0/0:13,0:13:33.02:0,33,894	0/0:18,0:18:32.53:0,33,421	0/1:19,0:19:58.05:58,0,183	0/1:14,0:14:99:106,0,206	1/1:26,3:31:63.04:787,63,0	1/1:4,16:20:11.44:399,11,0	0/0:17,0:15:37.53:0,38,367	0/1:14,0:16:64.26:64,0,157	0/0:33,0:36:66.17:0,66,616	0/0:18,0:17:48:0,48,990	0/0:17,0:15:39.88:0,40,591	0/0:44,0:44:84.13:0,84,1938	0/0:18,0:17:36.08:0,36,511	0/0:14,0:14:41.99:0,42,477	0/1:30,0:29:27.30:27,0,401	0/0:17,0:17:48.16:0,48,1614
chr10	63361272	.	AAAAC	A	9571.03	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-1.760;DP=649;FS=22.320;HRun=0;HaplotypeScore=116.9649;InbreedingCoeff=0.9830;MQ=71.45;MQ0=4;MQRankSum=-2.358;QD=29.63;ReadPosRankSum=1.187;VQSLOD=3.2570;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:45:69.24:0,69,1201	0/0:6,0:6:9.02:0,9,171	0/0:40,0:33:42.06:0,42,762	0/0:19,0:17:21.05:0,21,369	0/0:10,0:22:39.06:0,39,623	1/1:0,18:18:42.14:688,42,0	1/1:9,13:22:30.10:492,30,0	0/0:23,0:23:24.05:0,24,445	0/0:22,0:22:48.15:0,48,1064	1/1:9,17:26:45.14:692,45,0	1/1:7,16:23:39.13:626,39,0	1/1:5,17:22:39.13:639,39,0	0/0:21,0:21:36.10:0,36,820	1/1:3,14:17:29.94:491,30,0	1/1:7,17:24:39.23:843,39,0	1/1:5,17:22:35.91:590,36,0	0/0:34,0:34:63.19:0,63,1460	0/0:24,0:24:63.22:0,63,1523	1/1:10,10:20:27.08:419,27,0	1/1:5,15:20:39.07:639,39,0	1/1:7,18:24:45.15:737,45,0	0/0:22,0:22:45.12:0,45,954	0/0:16,0:16:24.08:0,24,551	0/0:30,0:30:10.98:0,11,1542	1/1:4,15:19:36.12:590,36,0	1/1:6,24:30:72.22:1143,72,0	1/1:9,16:25:45.15:737,45,0	1/1:0,10:10:15.05:246,15,0
chr10	63362496	.	T	TA	1001.70	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-6.695;DP=501;FS=7.923;HRun=9;HaplotypeScore=52.0853;InbreedingCoeff=0.8816;MQ=69.41;MQ0=1;MQRankSum=1.134;QD=22.77;ReadPosRankSum=0.475;VQSLOD=4.3240;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:77.97:0,78,677	0/0:10,0:10:14.99:0,15,130	0/0:11,0:9:6.45:0,6,50	0/0:20,0:16:1.28:0,1,149	0/0:18,0:18:47.99:0,48,417	0/0:21,0:21:56.97:0,57,491	0/0:14,0:14:26.96:0,27,226	0/0:34,0:34:77.63:0,78,671	0/0:16,0:16:26.98:0,27,234	0/0:26,0:26:68.96:0,69,591	0/0:21,0:21:50.98:0,51,441	0/0:11,0:11:32.99:0,33,286	1/1:0,14:14:39.11:431,39,0	0/0:15,0:15:35.98:0,36,313	0/0:7,0:7:20.99:0,21,180	0/0:27,0:27:65.95:0,66,570	0/0:29,0:29:77.95:0,78,670	0/0:20,0:20:53.96:0,54,464	0/0:27,0:26:68.98:0,69,598	0/0:24,0:24:59.98:0,60,521	0/0:3,0:3:6:0,6,52	1/1:1,8:9:24.06:263,24,0	1/1:1,11:12:24.06:266,24,0	1/1:1,8:9:18.05:199,18,0	0/0:22,0:22:59.98:0,60,521	0/0:21,0:21:53.98:0,54,467	0/0:21,0:21:50.15:0,50,410	0/0:9,0:9:26.97:0,27,230
chr10	63362749	.	CCAATTCGAA	C	1505.96	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=6.805;DP=557;FS=6.426;HRun=0;HaplotypeScore=151.4934;InbreedingCoeff=0.8909;MQ=86.12;MQ0=0;MQRankSum=-7.065;QD=47.06;ReadPosRankSum=1.798;VQSLOD=3.1590;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,132,6079	0/0:7,0:7:21.07:0,21,837	0/0:20,0:19:51.13:0,51,2014	0/0:28,0:28:75.09:0,75,2748	0/0:19,0:19:54.19:0,54,2496	0/0:21,0:21:63.22:0,63,2883	0/0:22,0:22:63.19:0,63,2613	0/0:23,0:23:66.23:0,66,3071	0/0:22,0:22:63.22:0,63,2969	0/0:16,0:16:45.15:0,45,1750	0/0:8,0:8:24.08:0,24,1090	0/0:21,0:21:60.21:0,60,2804	1/1:2,12:14:30.10:918,30,0	0/0:15,0:15:45.15:0,45,2143	0/0:30,0:30:87.30:0,87,3994	0/0:23,0:23:69.24:0,69,3255	0/0:50,0:50:99:0,148,6837	0/0:20,0:20:48.16:0,48,2315	0/0:20,0:20:57.17:0,57,2391	0/0:13,0:13:36.12:0,36,1643	0/0:28,0:28:81.24:0,81,3448	1/1:0,1:1:3.01:92,3,0	1/1:1,1:2:3.01:92,3,0	1/1:6,9:15:18.06:545,18,0	0/0:14,0:14:42.13:0,42,1922	0/0:18,0:18:51.18:0,51,2350	0/0:18,0:18:48.16:0,48,2212	0/0:24,0:24:69.24:0,69,3157
chr10	63362944	.	CTTATA	C	4830.76	PASS	AB=0.923;AC=27;AF=0.482;AN=56;BaseQRankSum=10.958;DP=297;FS=5.230;HRun=0;HaplotypeScore=56.9019;InbreedingCoeff=0.8066;MQ=59.18;MQ0=0;MQRankSum=-3.626;QD=37.74;ReadPosRankSum=2.540;VQSLOD=4.2783;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:57.20:0,57,1668	0/0:4,0:4:12.04:0,12,369	0/0:8,0:5:9:0,9,206	0/0:9,0:6:14.97:0,15,347	0/0:14,0:14:33.09:0,33,839	1/1:1,11:12:27.09:559,27,0	1/1:1,6:7:15.05:285,15,0	0/0:37,0:37:99:0,102,2907	0/0:7,0:7:21.06:0,21,575	1/1:2,6:8:18.04:334,18,0	1/1:0,9:9:12.04:247,12,0	1/1:2,2:4:3.01:62,3,0	0/0:4,0:4:9.03:0,9,225	1/1:0,5:5:15.05:311,15,0	1/1:2,7:9:12.04:248,12,0	1/1:2,8:10:21.07:435,21,0	0/0:24,0:24:72.22:0,72,1997	0/0:20,0:20:57.19:0,57,1636	1/1:3,15:18:45.07:777,45,0	1/1:3,9:12:27.02:513,27,0	1/1:1,7:8:9.03:186,9,0	0/0:3,0:3:3.01:0,3,92	0/0:5,0:5:15.04:0,15,394	0/0:3,0:3:2.98:0,3,21	1/1:0,9:9:27.09:533,27,0	0/1:11,1:12:29.10:29,0,772	1/1:0,5:5:15.05:311,15,0	0/0:9,0:9:21.05:0,21,549
chr10	63363868	.	CCTT	C	2144.52	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=10.829;DP=639;FS=2.589;HRun=0;HaplotypeScore=95.1919;InbreedingCoeff=0.9974;MQ=89.69;MQ0=0;MQRankSum=-2.907;QD=31.08;ReadPosRankSum=4.382;VQSLOD=4.0053;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,144,3108	0/0:6,0:6:18.04:0,18,317	0/0:37,0:37:96.11:0,96,1965	0/0:27,0:27:71.91:0,72,1440	0/0:15,0:15:45.15:0,45,993	0/0:14,0:14:42.14:0,42,885	0/0:25,0:25:66.23:0,66,1442	0/0:36,0:36:93.31:0,93,2000	0/0:23,0:23:66.21:0,66,1414	0/0:20,0:20:57.20:0,57,1250	0/0:19,0:19:48.15:0,48,1013	0/0:26,0:26:78.25:0,78,1630	1/1:1,17:18:36.12:578,36,0	0/0:23,0:23:66.23:0,66,1457	0/0:18,0:18:54.18:0,54,1153	0/0:18,0:17:54.19:0,54,1193	0/0:36,0:36:99:0,102,2222	0/0:11,0:11:33.09:0,33,685	0/0:25,0:25:63.22:0,63,1350	0/0:25,0:25:69.24:0,69,1524	0/0:34,0:34:99:0,102,2211	1/1:0,17:17:36.12:578,36,0	1/1:3,11:14:30.06:453,30,0	1/1:0,20:20:45.11:695,45,0	0/0:24,0:24:72.14:0,72,1423	0/0:20,0:20:60.21:0,60,1300	0/0:19,0:19:54.19:0,54,1191	0/0:19,0:19:51.18:0,51,1126
chr10	63364900	.	T	TG	16055.53	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-7.778;DP=671;FS=9.992;HRun=2;HaplotypeScore=69.3122;InbreedingCoeff=0.9976;MQ=80.69;MQ0=0;MQRankSum=-1.943;QD=39.16;ReadPosRankSum=1.996;VQSLOD=5.0160;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,123,1524	0/0:5,0:5:15.05:0,15,183	0/0:21,0:21:53.07:0,53,594	0/0:22,0:22:66.19:0,66,795	0/0:20,0:20:60.18:0,60,731	1/1:0,19:19:51.17:734,51,0	1/1:1,41:42:99:1512,105,0	0/0:34,0:34:90.27:0,90,1105	0/0:24,0:24:66.17:0,66,791	1/1:0,22:22:63.18:885,63,0	1/1:0,15:15:39.13:560,39,0	1/1:2,28:30:81.27:1150,81,0	1/1:1,22:23:66.22:950,66,0	1/1:0,22:22:66.22:947,66,0	1/1:0,22:22:63.21:897,63,0	1/1:1,23:24:63.21:907,63,0	0/0:32,0:32:93.26:0,93,1125	0/0:26,0:26:69.22:0,69,855	1/1:2,18:20:54.18:775,54,0	1/1:1,17:18:48.16:690,48,0	1/1:1,52:53:99:2074,144,0	1/1:0,24:24:69.23:993,69,0	1/1:1,11:12:30.10:432,30,0	1/1:0,27:27:72.24:1037,72,0	1/1:0,19:19:54.18:778,54,0	0/0:24,0:24:72.22:0,72,883	1/1:0,18:18:51.17:734,51,0	0/0:10,0:10:30.09:0,30,372
chr10	63365112	.	GCCCTTATCCTCCCTCCACTTGCCTTT	G	30134.14	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=16.269;DP=552;FS=2.225;HRun=0;HaplotypeScore=352.5866;InbreedingCoeff=0.9857;MQ=81.59;MQ0=0;MQRankSum=-15.887;QD=98.16;ReadPosRankSum=6.613;VQSLOD=3.3000;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:66.23:0,66,6258	0/0:11,0:11:33.11:0,33,3210	0/0:25,0:25:72.25:0,72,5383	0/0:25,0:25:72.25:0,72,5217	0/0:28,0:28:81.28:0,81,8815	1/1:4,16:19:39.13:2775,39,0	1/1:8,13:21:21.07:1494,21,0	0/0:30,0:30:87.30:0,87,7158	0/0:20,0:20:60.21:0,60,6913	1/1:9,15:24:39.13:2776,39,0	1/1:6,17:23:33.11:2346,33,0	1/1:1,10:11:24.08:1708,24,0	1/1:4,12:16:21.07:1494,21,0	1/1:3,19:22:36.12:2559,36,0	1/1:5,22:27:42.14:2988,42,0	1/1:8,9:17:21.07:1494,21,0	0/0:21,0:21:63.22:0,63,7291	0/0:25,0:25:72.25:0,72,7894	1/1:4,6:9:14.92:318,15,0	1/1:4,8:12:18.06:1105,18,0	1/1:5,7:12:12.04:774,12,0	1/1:6,12:18:27.05:1727,27,0	1/1:5,12:17:14.87:1066,15,0	1/1:2,13:15:21.03:1238,21,0	1/1:5,20:25:42.14:2988,42,0	0/0:23,0:23:69.24:0,69,7808	1/1:5,12:17:18.06:1281,18,0	0/0:15,0:15:41.77:0,42,4610
chr10	63365526	.	CA	C	6107.25	PASS	AB=1.000;AC=47;AF=0.839;AN=56;BaseQRankSum=4.426;DP=578;FS=2.551;HRun=12;HaplotypeScore=156.1646;InbreedingCoeff=0.7979;MQ=63.91;MQ0=8;MQRankSum=-1.826;QD=12.62;ReadPosRankSum=3.199;VQSLOD=3.3453;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:30:39.03:0,39,239	1/1:5,0:14:12.20:35,12,0	0/0:20,1:15:0.35:0,0,126	0/1:32,0:17:9.54:10,0,99	0/0:10,0:24:21.41:0,21,206	1/1:4,26:30:73.82:570,74,0	1/1:6,9:17:31.19:250,31,0	1/1:6,0:22:28.26:81,28,0	0/0:2,0:19:25.77:0,26,133	1/1:3,26:30:74.40:565,74,0	1/1:5,13:19:34.94:275,35,0	1/1:1,17:18:47.32:367,47,0	1/1:6,17:22:50.08:392,50,0	1/1:4,13:17:38.30:300,38,0	1/1:2,12:15:29.20:224,29,0	1/1:1,20:21:59.31:448,59,0	1/1:4,0:28:20:90,20,0	1/1:1,0:22:38.70:112,39,0	1/1:4,6:9:20.87:159,21,0	1/1:4,19:23:49.40:392,49,0	1/1:4,16:20:41.42:316,41,0	1/1:2,9:10:23.91:185,24,0	1/1:2,12:14:35.71:266,36,0	1/1:1,12:13:35.80:270,36,0	1/1:2,10:12:29.84:231,30,0	1/1:4,1:27:42.61:136,43,0	1/1:5,16:21:46.51:367,47,0	1/1:8,1:20:19.26:70,19,0
chr10	63365732	.	ACTCTCTCT	A	13813.59	PASS	AB=0.950;AC=35;AF=0.625;AN=56;BaseQRankSum=11.192;DP=466;FS=9.981;HRun=0;HaplotypeScore=155.5716;InbreedingCoeff=0.8694;MQ=61.79;MQ0=2;MQRankSum=-13.807;QD=51.35;ReadPosRankSum=2.036;VQSLOD=4.4693;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:69.24:0,69,2956	0/0:2,0:3:9.03:0,9,275	0/0:11,0:7:12.04:0,12,392	0/0:14,0:13:24.05:0,24,607	0/0:26,0:26:72.25:0,72,3025	1/1:4,15:19:51.13:1256,51,0	1/1:7,3:10:12.03:268,12,0	0/0:14,0:34:87.27:0,87,2699	0/0:11,0:11:33.11:0,33,1413	1/1:4,22:26:66.22:1678,66,0	1/1:4,17:21:51.17:1368,51,0	1/1:3,6:9:21.07:563,21,0	1/1:3,7:10:24.07:590,24,0	1/1:5,5:10:21.04:452,21,0	1/1:2,7:9:18.06:483,18,0	1/1:4,6:10:21.04:504,21,0	0/0:3,0:24:60.21:0,60,2133	0/0:5,0:26:69.24:0,69,2479	1/1:8,9:16:27.09:725,27,0	1/1:3,20:23:54.07:1269,54,0	1/1:9,3:12:9.03:241,9,0	1/1:6,8:14:27.09:670,27,0	1/1:2,8:10:27.09:696,27,0	1/1:2,1:3:3.01:80,3,0	1/1:4,16:20:48.16:1288,48,0	0/1:6,1:19:29.34:29,0,1645	1/1:7,20:26:66.17:1652,66,0	0/0:6,0:20:33.11:0,33,1131
chr10	63365804	.	T	TA	763.70	PASS	AB=0.938;AC=9;AF=0.161;AN=56;BaseQRankSum=4.098;DP=470;FS=4.930;HRun=3;HaplotypeScore=128.9926;InbreedingCoeff=0.8001;MQ=69.74;MQ0=2;MQRankSum=-5.114;QD=12.52;ReadPosRankSum=1.215;VQSLOD=2.3583;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:90.29:0,90,1236	0/0:8,0:8:24.08:0,24,336	0/0:14,0:13:35.92:0,36,418	0/0:10,0:9:21.02:0,21,240	0/0:36,0:36:99:0,108,1464	0/0:18,0:18:36.67:0,37,199	0/0:11,0:11:22.07:0,22,117	0/0:28,0:28:81.24:0,81,1111	0/0:13,0:13:39.13:0,39,544	0/0:19,0:19:17.75:0,18,194	0/0:15,0:15:37.67:0,38,197	0/0:10,0:10:18.03:0,18,116	1/1:6,14:20:25.91:450,26,0	0/0:10,0:10:19.35:0,19,116	0/0:19,0:19:23.57:0,24,214	0/0:15,0:15:25.59:0,26,169	0/0:24,0:24:72.20:0,72,965	0/0:22,0:21:60.14:0,60,795	0/1:14,0:15:8.67:9,0,93	0/0:18,1:19:11.98:0,12,171	0/0:3,0:3:8.72:0,9,50	1/1:3,4:7:10.94:123,11,0	1/1:5,8:14:25.72:274,26,0	1/1:1,4:5:4.29:60,4,0	0/0:20,0:20:39.34:0,39,219	0/0:21,0:21:63.21:0,63,881	0/0:28,0:28:58.91:0,59,326	0/0:16,0:16:48.16:0,48,661
chr10	63365858	.	TGTA	T	10985.37	PASS	AB=0.514;AC=33;AF=0.589;AN=56;BaseQRankSum=13.542;DP=506;FS=31.255;HRun=0;HaplotypeScore=94.4776;InbreedingCoeff=0.9254;MQ=91.98;MQ0=0;MQRankSum=-7.179;QD=42.09;ReadPosRankSum=3.672;VQSLOD=3.4931;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:78.23:0,78,1790	0/0:10,0:10:30.07:0,30,595	0/0:29,0:29:84.27:0,84,1857	0/0:17,0:17:51.17:0,51,1114	0/0:20,0:20:60.19:0,60,1371	1/1:1,13:14:39.13:682,39,0	1/1:1,16:17:45.15:793,45,0	0/0:34,0:34:99:0,102,2213	0/0:14,0:14:36.12:0,36,850	1/1:0,13:13:39.13:673,39,0	1/1:1,11:12:33.07:549,33,0	1/1:0,14:14:39.13:686,39,0	1/1:4,11:15:24.08:421,24,0	1/1:0,21:21:51.17:899,51,0	1/1:1,17:18:39.13:687,39,0	0/1:1,18:19:25.80:694,0,26	0/0:28,0:28:78.27:0,78,1798	0/0:25,0:25:72.25:0,72,1608	1/1:2,8:10:27.08:434,27,0	1/1:4,9:13:33.10:549,33,0	1/1:0,16:16:39.09:651,39,0	1/1:1,12:13:27.05:439,27,0	1/1:3,15:18:39.12:659,39,0	1/1:0,14:14:33.11:582,33,0	1/1:1,11:12:27.09:476,27,0	0/0:22,0:22:66.22:0,66,1499	1/1:1,21:22:63.22:1110,63,0	0/0:18,0:18:54.19:0,54,1276
chr10	63366125	.	CA	C	4515.94	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=8.283;DP=648;FS=9.144;HRun=2;HaplotypeScore=68.3474;InbreedingCoeff=0.9996;MQ=89.17;MQ0=0;MQRankSum=-1.589;QD=35.28;ReadPosRankSum=-0.306;VQSLOD=4.5974;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,102,1507	1/1:0,9:9:24.08:312,24,0	0/0:27,0:27:81.26:0,81,1167	0/0:24,0:24:53.15:0,53,797	0/0:26,0:26:78.19:0,78,1084	0/0:25,0:25:72.24:0,72,1079	0/0:29,0:29:84.26:0,84,1217	1/1:1,26:27:72.21:905,72,0	0/0:23,0:23:66.20:0,66,966	0/0:17,0:17:51.13:0,51,737	0/0:14,0:14:39.05:0,39,556	0/0:25,0:25:72.22:0,72,1036	0/0:21,0:21:63.20:0,63,923	0/0:23,0:23:69.21:0,69,984	0/0:27,0:27:81.23:0,81,1171	0/0:20,0:20:60.20:0,60,898	1/1:0,36:36:96.31:1246,96,0	1/1:1,19:20:54.18:701,54,0	0/0:30,0:30:87.28:0,87,1285	0/0:17,0:17:48.16:0,48,709	0/0:32,0:32:96.33:0,96,1439	0/0:16,0:16:45.10:0,45,628	0/0:26,0:26:75.20:0,75,1077	0/0:18,0:18:54.18:0,54,809	0/0:16,0:16:45.15:0,45,674	1/1:0,19:19:57.17:710,57,0	0/0:29,0:28:87.29:0,87,1296	1/1:0,17:17:51.11:642,51,0
chr10	63367148	.	T	TAAC	17339.64	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-10.182;DP=590;FS=0.675;HRun=0;HaplotypeScore=83.3425;InbreedingCoeff=0.9695;MQ=79.52;MQ0=0;MQRankSum=-5.016;QD=50.70;ReadPosRankSum=2.336;VQSLOD=7.1723;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,144,2180	0/0:10,0:10:24.08:0,24,371	0/0:20,0:20:42.10:0,42,602	0/0:18,0:18:39.09:0,39,545	0/0:20,0:20:54.18:0,54,836	1/1:2,17:19:51.18:1090,51,0	1/1:5,18:23:57.20:1212,57,0	0/0:25,0:25:51.17:0,51,789	0/0:21,0:21:57.14:0,57,834	1/1:6,20:26:66.21:1347,66,0	1/1:10,11:21:45.15:893,45,0	1/1:8,17:25:51.17:1089,51,0	1/1:1,11:12:30.10:644,30,0	1/1:3,18:21:54.18:1133,54,0	1/1:4,14:18:42.14:898,42,0	1/1:3,16:18:1.73:919,2,0	0/0:37,0:37:99:0,102,1578	0/0:15,0:15:36.12:0,36,557	1/1:2,15:18:51.15:1014,51,0	1/1:1,10:11:27.09:569,27,0	1/1:3,17:21:54.18:1111,54,0	1/1:2,24:26:60.21:1268,60,0	1/1:3,14:17:39.13:826,39,0	1/1:5,19:24:57.19:1175,57,0	1/1:1,20:22:57.20:1213,57,0	0/0:23,0:23:69.23:0,69,1047	1/1:4,14:19:45.15:938,45,0	0/0:10,0:10:30.10:0,30,464
chr10	63367216	.	GGT	G	308.80	PASS	AB=0.969;AC=10;AF=0.192;AN=52;BaseQRankSum=-1.719;DP=511;FS=0.855;HRun=0;HaplotypeScore=114.0003;InbreedingCoeff=0.5828;MQ=59.42;MQ0=7;MQRankSum=1.743;QD=2.36;ReadPosRankSum=1.981;VQSLOD=2.3262;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:26,8:36:20.72:192,21,0	0/0:6,0:9:9.01:0,9,96	./.	./.	1/1:11,6:16:6.02:65,6,0	0/0:20,0:18:12:0,12,115	0/0:23,0:24:17.98:0,18,186	0/0:16,0:16:14.96:0,15,162	0/0:6,0:12:6:0,6,52	0/0:23,0:22:26.91:0,27,262	0/0:9,0:9:2.95:0,3,42	0/0:18,0:20:14.99:0,15,130	0/0:9,0:13:18:0,18,171	0/0:17,0:17:14.87:0,15,127	0/0:14,0:16:11.99:0,12,101	0/0:11,0:13:9:0,9,78	0/0:20,0:33:18.01:0,18,175	0/0:8,0:14:6.48:0,6,71	0/0:21,0:21:26.91:0,27,252	0/0:22,0:22:13.23:0,13,139	0/0:22,0:20:9:0,9,91	0/1:12,1:15:14.72:15,0,126	0/0:12,0:14:21.04:0,21,255	0/1:20,0:21:2.59:3,0,332	0/0:14,0:14:3:0,3,26	1/1:18,0:24:21.17:101,21,0	0/0:9,0:10:8.97:0,9,73	1/1:12,0:18:17.04:84,17,0
chr10	63367532	.	AT	A	3595.92	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=8.844;DP=327;FS=1.504;HRun=9;HaplotypeScore=33.2097;InbreedingCoeff=0.9325;MQ=73.74;MQ0=1;MQRankSum=0.426;QD=23.66;ReadPosRankSum=1.614;VQSLOD=3.9696;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:51.15:0,51,588	0/0:9,0:9:24.06:0,24,269	0/0:14,0:11:23.96:0,24,247	0/0:14,0:7:9.01:0,9,90	0/0:18,0:17:39.12:0,39,450	1/1:0,12:12:36.02:330,36,0	1/1:1,2:3:6:55,6,0	0/0:22,0:22:51.14:0,51,580	0/0:6,0:6:18.05:0,18,208	1/1:1,16:17:51.03:466,51,0	1/1:0,8:8:24.01:220,24,0	1/1:2,8:10:24:220,24,0	1/1:1,6:7:15:137,15,0	1/1:0,1:1:3:27,3,0	1/1:1,5:6:15.01:137,15,0	1/1:2,6:8:15:137,15,0	0/0:20,0:19:51.15:0,51,589	0/0:16,0:16:42.12:0,42,485	1/1:6,13:19:39.01:357,39,0	1/1:0,13:13:36.02:329,36,0	1/1:0,13:13:36.02:330,36,0	1/1:0,4:4:12.01:110,12,0	1/1:2,8:10:24.01:220,24,0	1/1:0,4:4:12.01:110,12,0	1/1:2,6:8:18:165,18,0	0/0:15,0:15:36.10:0,36,408	1/1:0,9:9:27.01:247,27,0	0/0:18,0:18:48.13:0,48,544
chr10	63368373	.	CTATCTATCTAT	C	714.71	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=4.685;DP=602;FS=0.000;HRun=0;HaplotypeScore=346.1164;InbreedingCoeff=0.3470;MQ=44.02;MQ0=3;MQRankSum=-5.283;QD=5.91;ReadPosRankSum=0.177;VQSLOD=1.1411;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:27:42.14:0,42,1475	0/0:12,0:12:33.11:0,33,1670	0/0:17,0:5:14.08:0,14,240	0/0:14,0:8:11.63:0,12,261	0/0:28,0:28:3.41:0,3,104	0/0:22,0:21:17.12:0,17,454	0/0:9,0:9:12.04:0,12,366	0/0:38,0:36:99:0,103,1820	1/1:12,6:18:12.18:417,12,0	0/0:25,0:24:75.25:0,75,1938	1/1:25,0:25:0.44:2,0,0	0/0:20,0:20:10.18:0,10,167	0/0:15,0:15:4.75:0,5,259	0/0:19,0:19:0.74:0,1,46	0/0:19,0:19:0.67:0,1,94	0/0:26,0:26:15.02:0,15,211	0/0:17,0:18:34:0,34,872	0/0:17,0:17:48.16:0,48,1669	0/0:11,0:11:30.09:0,30,777	0/0:39,0:39:23.38:0,23,701	0/1:12,0:12:0:0,0,0	1/1:24,0:24:0.58:2,1,0	0/0:26,0:26:0.04:0,0,1	0/0:10,0:10:0.06:0,0,0	0/0:34,0:34:3.84:0,4,124	0/1:32,0:32:99:368,0,669	0/0:33,0:33:69.23:0,69,2010	0/1:10,0:10:34.65:35,0,66
chr10	63368387	.	C	CCT	489.04	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=1.181;DP=535;FS=8.693;HRun=0;HaplotypeScore=266.4344;InbreedingCoeff=0.5356;MQ=49.17;MQ0=1;MQRankSum=-1.012;QD=24.45;ReadPosRankSum=-0.321;VQSLOD=2.1834;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:30.10:0,30,375	0/0:10,0:10:27.09:0,27,337	0/0:24,0:11:9.23:0,9,217	0/0:17,0:13:17.60:0,18,316	0/0:28,0:28:44.58:0,45,385	0/0:15,0:14:17.58:0,18,142	0/0:9,0:9:17.95:0,18,175	0/0:26,0:25:45.09:0,45,534	1/1:1,13:20:39.07:583,39,0	0/0:20,0:19:48.58:0,49,581	0/0:22,0:22:5.92:0,6,39	0/0:16,0:16:18.03:0,18,171	0/0:15,0:15:5.68:0,6,56	0/0:17,0:17:17.25:0,17,118	0/0:17,0:17:23.73:0,24,159	0/0:18,0:18:23.35:0,23,158	0/0:17,0:18:41.90:0,42,485	0/0:19,0:19:21.43:0,21,433	0/0:10,0:10:27.09:0,27,337	0/0:33,0:33:23.56:0,24,247	0/0:8,0:8:2.97:0,3,20	0/0:23,0:23:14.13:0,14,97	0/0:26,0:26:20.10:0,20,132	0/0:11,0:11:2.66:0,3,19	0/0:29,0:29:35.04:0,35,249	0/0:26,0:26:63.20:0,63,787	0/0:30,0:30:65.95:0,66,714	0/0:5,0:5:6.02:0,6,75
chr10	63368418	.	AT	A	1636.03	PASS	AB=0.592;AC=27;AF=0.482;AN=56;BaseQRankSum=12.459;DP=497;FS=8.574;HRun=1;HaplotypeScore=192.9459;InbreedingCoeff=0.4869;MQ=70.93;MQ0=0;MQRankSum=-13.731;QD=6.04;ReadPosRankSum=5.545;VQSLOD=0.3138;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:36.12:0,36,571	0/0:5,0:5:12.04:0,12,192	0/0:22,1:21:5.20:0,5,577	0/0:20,0:19:50.69:0,51,673	0/0:28,0:28:68.80:0,69,1090	0/1:3,12:15:6.31:53,0,6	1/1:3,11:14:19.11:113,19,0	0/0:37,0:37:99:0,111,1697	0/0:21,0:21:36.59:0,37,568	1/1:2,18:20:12.98:240,13,0	1/1:5,13:18:9.18:64,9,0	1/1:0,8:8:4.49:83,4,0	0/1:4,6:10:30.58:59,0,31	1/1:2,8:10:14.98:83,15,0	1/1:1,11:12:23.12:127,23,0	1/1:4,9:13:26.76:158,27,0	0/0:20,0:20:51.17:0,51,815	0/0:14,0:14:42.14:0,42,671	0/1:2,6:8:13.69:55,0,14	0/1:7,17:24:6.39:97,0,6	0/1:5,5:10:11.17:11,0,19	1/1:4,15:19:20.61:119,21,0	0/1:7,21:28:12.59:139,0,13	0/1:3,10:13:10.47:10,0,17	1/1:3,20:22:26.66:152,27,0	0/0:31,0:31:87.30:0,87,1379	1/1:3,23:26:25.64:274,26,0	0/0:6,0:6:12.04:0,12,192
chr10	63368420	.	AGAG	A	4487.44	PASS	AB=0.609;AC=29;AF=0.518;AN=56;BaseQRankSum=13.225;DP=508;FS=16.218;HRun=0;HaplotypeScore=197.7184;InbreedingCoeff=0.6928;MQ=73.05;MQ0=0;MQRankSum=-14.690;QD=16.20;ReadPosRankSum=-0.638;VQSLOD=3.0472;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:36.12:0,36,874	0/0:5,0:5:12.04:0,12,270	0/0:24,0:21:41.06:0,41,886	0/0:21,0:21:48.11:0,48,1030	0/0:29,0:29:71.98:0,72,1697	1/1:5,12:17:26.41:284,26,0	1/1:3,11:14:23.41:220,23,0	0/0:38,0:38:99:0,114,2695	0/0:21,0:21:35.20:0,35,853	1/1:3,18:21:35.84:497,36,0	0/1:6,13:19:8.51:93,0,9	1/1:0,8:8:16.99:181,17,0	0/1:4,6:10:7.15:145,0,7	1/1:2,8:10:17.71:162,18,0	1/1:1,11:12:32.94:298,33,0	1/1:4,9:13:21.51:214,22,0	0/0:21,0:21:54.19:0,54,1313	0/0:14,0:14:42.14:0,42,1034	0/1:2,6:8:14.97:123,0,15	1/1:6,17:23:9.57:256,10,0	0/1:6,5:11:6.82:107,0,7	1/1:4,14:18:44.70:359,45,0	1/1:9,21:30:21.41:429,21,0	0/1:3,10:13:0.37:75,0,0	1/1:3,20:22:54.19:442,54,0	0/0:31,0:31:87.30:0,87,2043	1/1:4,23:27:35.53:601,36,0	0/0:7,0:7:15.05:0,15,356
chr10	63369928	.	G	GA	4887.17	PASS	AB=0.646;AC=36;AF=0.643;AN=56;BaseQRankSum=-8.127;DP=479;FS=0.419;HRun=12;HaplotypeScore=74.2203;InbreedingCoeff=0.4636;MQ=72.40;MQ0=0;MQRankSum=-0.111;QD=13.96;ReadPosRankSum=-0.688;VQSLOD=5.0247;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:6,25:31:30.55:381,0,31	0/0:16,0:17:40.81:0,41,290	0/1:14,0:15:2.03:2,0,54	0/0:7,0:6:2.69:0,3,21	1/1:4,9:15:25.23:222,25,0	0/1:8,15:23:45.49:250,0,45	1/1:6,9:16:7.98:226,8,0	0/0:24,0:24:62.59:0,63,457	1/1:1,8:9:23.99:224,24,0	1/1:6,6:15:3.95:195,4,0	1/1:6,11:21:21.06:295,21,0	1/1:2,7:10:11.97:107,12,0	0/1:2,11:14:10.93:215,0,11	1/1:5,9:14:2.03:169,2,0	1/1:0,14:16:35.73:320,36,0	0/1:4,7:11:0.88:154,0,1	0/0:31,0:31:66.70:0,67,573	0/0:21,0:22:35.29:0,35,248	1/1:6,13:20:29.10:308,29,0	1/1:7,9:17:26.88:248,27,0	1/1:3,9:12:5.13:212,5,0	0/1:4,12:17:20.58:281,0,21	1/1:7,11:19:27.47:254,27,0	1/1:4,14:18:17.15:328,17,0	1/1:5,12:17:23.87:219,24,0	0/0:14,0:16:28.63:0,29,202	1/1:7,11:20:0.43:278,0,0	0/0:12,0:12:26.80:0,27,196
chr10	63370257	.	ATT	A	7108.26	PASS	AB=0.510;AC=27;AF=0.482;AN=56;BaseQRankSum=-2.568;DP=542;FS=6.390;HRun=10;HaplotypeScore=75.7614;InbreedingCoeff=0.9365;MQ=68.63;MQ0=4;MQRankSum=-0.065;QD=25.85;ReadPosRankSum=4.114;VQSLOD=4.7312;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:54.18:0,54,853	0/0:1,0:20:44.92:0,45,154	0/0:16,0:15:27.09:0,27,399	0/0:18,0:17:41.16:0,41,596	0/0:35,0:35:99:0,99,1566	1/1:1,28:27:72.19:803,72,0	1/1:1,11:12:27.07:301,27,0	0/0:4,0:28:53.37:0,53,197	0/0:13,0:13:39.13:0,39,619	1/1:0,19:19:57.14:627,57,0	1/1:1,26:27:78.21:865,78,0	1/1:1,13:14:33.08:368,33,0	0/0:9,0:9:24.07:0,24,359	1/1:0,11:11:27.07:301,27,0	1/1:1,18:18:48.12:535,48,0	1/1:2,11:13:33.09:368,33,0	0/0:1,0:20:50.40:0,50,187	0/0:1,0:18:34.81:0,35,120	1/1:4,11:15:30.03:324,30,0	1/1:2,25:27:72.19:803,72,0	1/1:1,13:14:33.09:368,33,0	0/0:21,0:21:63.21:0,63,1000	0/0:25,0:25:66.23:0,66,1048	0/0:8,0:8:21.07:0,21,333	1/1:0,18:18:42.11:468,42,0	0/1:1,2:25:8.10:8,0,125	1/1:2,30:32:87.23:970,87,0	0/0:3,0:18:34.93:0,35,120
chr10	63371901	.	C	CT	6903.77	PASS	AB=1.000;AC=38;AF=0.679;AN=56;BaseQRankSum=-0.411;DP=542;FS=2.170;HRun=5;HaplotypeScore=66.2541;InbreedingCoeff=0.8027;MQ=73.50;MQ0=8;MQRankSum=-2.358;QD=20.61;ReadPosRankSum=1.841;VQSLOD=4.2952;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:65.84:0,66,648	0/0:15,0:15:42.07:0,42,429	0/0:33,0:18:9.22:0,9,126	0/0:24,0:17:12.46:0,12,122	0/0:24,0:24:62.85:0,63,609	1/1:5,19:23:42.10:521,42,0	1/1:4,9:13:27.09:353,27,0	0/0:39,0:39:99:0,102,997	1/1:4,11:15:27.06:324,27,0	1/1:3,18:21:52.91:626,53,0	1/1:5,20:25:45.22:676,45,0	1/1:1,7:8:8.77:152,9,0	1/1:10,0:10:21.01:191,21,0	1/1:1,15:16:30.03:371,30,0	1/1:5,3:8:12.50:143,12,0	1/1:2,8:10:21.07:275,21,0	0/0:24,0:24:64.30:0,64,666	0/0:23,0:23:60.11:0,60,619	1/1:1,11:12:33.05:367,33,0	1/1:5,22:27:72.17:892,72,0	1/1:7,2:9:14.99:157,15,0	1/1:13,0:13:26.63:197,27,0	1/1:15,0:15:33:307,33,0	1/1:8,0:8:14.75:148,15,0	1/1:0,16:16:30.09:382,30,0	0/1:30,0:30:25.73:26,0,128	1/1:4,21:25:54.25:750,54,0	0/1:30,0:30:47.29:47,0,53
chr10	63371906	.	T	TA	3539.62	PASS	AB=0.981;AC=35;AF=0.625;AN=56;BaseQRankSum=8.033;DP=536;FS=0.791;HRun=12;HaplotypeScore=75.7808;InbreedingCoeff=0.5440;MQ=72.24;MQ0=8;MQRankSum=0.721;QD=10.82;ReadPosRankSum=4.099;VQSLOD=3.3855;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:25:63.40:0,63,430	0/0:14,0:15:41.26:0,41,291	0/0:31,0:16:13.13:0,13,87	0/0:21,0:14:11.67:0,12,74	0/0:28,0:28:56.11:0,56,396	1/1:20,1:22:5.11:201,5,0	1/1:10,0:10:9.33:124,9,0	0/0:39,0:39:70.48:0,70,503	1/1:12,1:13:6.76:113,7,0	1/1:21,0:21:9.90:131,10,0	0/1:23,0:23:14.15:211,0,14	0/1:8,0:8:3.88:47,0,4	1/1:0,0:10:19.97:99,20,0	0/1:17,0:17:10.32:105,0,10	0/1:5,0:5:10.13:41,0,10	1/1:8,0:8:2.79:87,3,0	0/0:25,0:26:44.08:0,44,463	0/0:23,0:23:53.64:0,54,390	1/1:11,0:12:4:77,4,0	0/1:26,0:29:10.68:279,0,11	1/1:4,0:9:5.75:58,6,0	1/1:1,0:14:14.28:73,14,0	1/1:1,0:18:31.62:162,32,0	1/1:1,0:9:13.99:67,14,0	1/1:16,0:16:27.14:131,27,0	1/1:6,22:28:44.57:566,45,0	1/1:24,0:24:18.76:260,19,0	1/1:2,24:30:62.83:708,63,0
chr10	63372033	.	C	CTTTTTTT	11769.59	PASS	AB=1.000;AC=34;AF=0.607;AN=56;BaseQRankSum=14.247;DP=382;FS=44.952;HRun=2;HaplotypeScore=151.3249;InbreedingCoeff=0.8194;MQ=81.59;MQ0=0;MQRankSum=-14.666;QD=67.64;ReadPosRankSum=-3.453;VQSLOD=-0.1566;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,102,2363	0/0:5,0:5:15.03:0,15,320	0/0:20,0:20:54.18:0,54,1286	0/0:20,0:20:48.14:0,48,966	0/0:25,0:25:75.23:0,75,1755	1/1:12,0:14:42.13:1270,42,0	1/1:11,2:13:39.13:1328,39,0	0/0:27,0:27:72.23:0,72,1710	0/0:23,0:23:63.21:0,63,1528	1/1:15,0:15:36.12:1231,36,0	1/1:10,1:11:33.11:1035,33,0	1/1:5,0:5:15.05:504,15,0	1/1:6,0:6:15.05:484,15,0	1/1:2,0:2:6.01:120,6,0	1/1:7,0:7:21.07:696,21,0	1/1:8,0:8:24.07:749,24,0	0/0:25,0:25:72.24:0,72,1779	0/0:16,0:16:45.15:0,45,1085	1/1:11,0:11:18.05:455,18,0	1/1:12,0:12:36.11:921,36,0	1/1:5,0:5:14.26:382,14,0	1/1:5,0:5:12:314,12,0	1/1:7,1:8:24.08:778,24,0	0/1:4,0:4:65.11:71,0,65	1/1:11,0:10:30.10:923,30,0	0/1:30,0:30:16.34:16,0,1802	1/1:4,0:7:15.05:493,15,0	0/0:12,0:12:36.12:0,36,889
chr10	63373364	.	AGAACCCT	A	2632.49	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.659;DP=680;FS=15.153;HRun=0;HaplotypeScore=156.8892;InbreedingCoeff=0.9996;MQ=65.42;MQ0=0;MQRankSum=-9.844;QD=51.62;ReadPosRankSum=-2.354;VQSLOD=2.3688;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,35:35:84.29:2129,84,0	0/0:15,0:15:45.13:0,45,1607	0/0:27,0:26:57.19:0,57,2368	0/0:21,0:20:57.18:0,57,2023	1/1:1,15:16:30.10:625,30,0	0/0:23,0:23:66.20:0,66,2410	0/0:24,0:24:72.25:0,72,2908	0/0:26,0:26:69.22:0,69,2458	0/0:33,0:33:99:0,99,3622	0/0:27,0:27:81.28:0,81,3198	0/0:12,0:12:36.12:0,36,1435	0/0:28,0:28:84.27:0,84,3201	0/0:22,0:22:66.23:0,66,2559	0/0:19,0:19:57.20:0,57,2287	0/0:35,0:35:99:0,102,3931	0/0:36,0:36:99:0,108,4207	0/0:38,0:38:99:0,111,4207	0/0:21,0:21:60.19:0,60,2264	0/0:23,0:23:60.14:0,60,2001	0/0:25,0:25:72.25:0,72,2903	0/0:33,0:33:90.29:0,90,3485	0/0:16,0:16:45.14:0,45,1683	0/0:21,0:21:57.18:0,57,2198	0/0:34,0:34:99:0,102,4090	0/0:14,0:14:42.14:0,42,1665	0/0:23,0:23:69.24:0,69,2685	0/0:19,0:18:57.16:0,57,2092	0/0:14,0:14:42.14:0,42,1573
chr10	63373827	.	GAC	G	5026.93	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=12.246;DP=672;FS=0.375;HRun=0;HaplotypeScore=82.9821;InbreedingCoeff=0.9983;MQ=89.87;MQ0=2;MQRankSum=-1.912;QD=34.91;ReadPosRankSum=2.076;VQSLOD=7.1997;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,42:45:99:1590,111,0	0/0:7,0:7:18.06:0,18,323	0/0:26,0:26:69.11:0,69,1158	0/0:26,0:26:69.17:0,69,1153	1/1:0,19:18:51.17:730,51,0	0/0:24,0:24:66.23:0,66,1207	0/0:25,0:25:72.20:0,72,1229	0/0:25,0:25:69.22:0,69,1217	0/0:30,0:30:81.23:0,81,1383	0/0:25,0:24:69.24:0,69,1265	0/0:15,0:14:45.14:0,45,793	0/0:20,0:20:60.21:0,60,1092	1/1:1,20:21:51.17:731,51,0	0/0:24,0:24:69.21:0,69,1200	0/0:28,0:28:78.27:0,78,1429	0/0:29,0:29:84.27:0,84,1509	0/0:45,0:45:99:0,126,2302	0/0:20,0:20:57.16:0,57,1009	0/0:15,0:15:45.15:0,45,796	0/0:23,0:23:66.21:0,66,1178	0/0:51,0:51:99:0,147,2577	1/1:1,22:23:48.16:688,48,0	1/1:2,15:17:39.13:559,39,0	1/1:0,19:18:51.17:730,51,0	0/0:11,0:11:33.11:0,33,605	0/0:20,0:20:57.19:0,57,1026	0/0:25,0:25:69.24:0,69,1256	0/0:14,0:14:42.14:0,42,770
chr10	63373992	.	T	TGC	1361.26	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-2.188;DP=615;FS=4.243;HRun=0;HaplotypeScore=132.5157;InbreedingCoeff=0.9135;MQ=72.54;MQ0=10;MQRankSum=0.906;QD=11.07;ReadPosRankSum=0.400;VQSLOD=2.9484;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:31,0:31:64.89:477,65,0	0/0:14,0:14:31.79:0,32,271	0/0:28,0:16:27.59:0,28,218	0/0:28,0:15:18.86:0,19,208	1/1:6,15:22:1.08:106,1,0	0/0:21,0:21:50.90:0,51,427	0/0:23,0:23:53.79:0,54,467	0/0:21,0:20:54.06:0,54,500	0/0:23,0:23:2.66:0,3,383	0/0:29,0:29:64.34:0,64,637	0/0:16,0:16:32.72:0,33,254	0/0:17,0:17:28.22:0,28,248	1/1:12,0:12:27.77:178,28,0	0/0:28,0:28:69.86:0,70,551	0/0:18,0:18:41.97:0,42,376	0/0:21,0:21:56.90:0,57,502	0/0:36,0:36:59.38:0,59,493	0/0:16,0:16:32.98:0,33,285	0/0:21,0:21:56.88:0,57,515	0/0:21,0:21:38.76:0,39,313	0/0:33,0:33:80.89:0,81,672	1/1:16,0:16:35.60:256,36,0	1/1:18,0:18:35.48:250,35,0	1/1:24,0:24:32.33:273,32,0	0/0:21,0:21:42.02:0,42,344	0/0:23,0:23:50.76:0,51,435	0/0:21,0:21:44.76:0,45,399	0/0:13,0:12:26.85:0,27,204
chr10	63373995	.	GCT	G	468.96	PASS	AB=0.994;AC=23;AF=0.426;AN=54;BaseQRankSum=3.153;DP=639;FS=5.055;HRun=0;HaplotypeScore=117.1913;InbreedingCoeff=0.2189;MQ=69.17;MQ0=12;MQRankSum=-0.031;QD=1.37;ReadPosRankSum=0.932;VQSLOD=2.1291;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:5.43:0,5,73	1/1:10,0:16:5.68:28,6,0	./.	0/0:28,0:15:0:0,0,0	0/1:23,0:23:23.86:24,0,102	1/1:23,0:23:13.76:60,14,0	1/1:22,0:22:16.03:74,16,0	0/0:22,0:21:0:0,0,0	0/1:20,1:23:14.96:15,0,114	0/1:30,0:30:10.53:11,0,22	0/0:15,0:15:3:0,3,25	0/1:19,0:19:11.18:11,0,24	0/0:14,0:14:6.92:0,7,49	0/1:30,0:30:30.69:31,0,37	1/1:17,0:17:8.10:34,8,0	0/1:23,0:23:33.26:33,0,78	1/1:20,15:36:19.81:189,20,0	1/1:10,0:16:11.51:64,12,0	0/0:25,0:25:1.26:0,1,83	1/1:21,0:20:5.42:23,5,0	0/0:32,0:32:7.23:0,7,69	0/0:18,0:18:11.99:0,12,116	0/0:18,0:18:5.46:0,5,42	0/0:26,0:26:9:0,9,85	1/1:26,0:26:5.59:25,6,0	0/0:27,0:27:24.04:0,24,159	0/1:18,0:18:12.34:12,0,18	0/0:15,0:13:0.17:0,0,17
chr10	63374031	.	TCTCTCA	T	4218.12	PASS	AB=1.000;AC=32;AF=0.571;AN=56;BaseQRankSum=-5.713;DP=584;FS=6.234;HRun=0;HaplotypeScore=128.6402;InbreedingCoeff=0.0442;MQ=62.00;MQ0=18;MQRankSum=0.662;QD=10.12;ReadPosRankSum=-4.757;VQSLOD=0.8506;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:20,0:19:99:136,0,130	0/0:10,0:10:19.90:0,20,151	0/0:38,0:17:13.61:0,14,201	0/0:59,0:24:2.96:0,3,211	0/1:17,0:17:99:127,0,273	1/1:17,2:18:14.25:173,14,0	1/1:17,1:18:32.68:363,33,0	0/0:10,0:8:16.59:0,17,149	0/0:16,0:16:33.48:0,33,505	1/1:20,0:20:37.33:243,37,0	1/1:11,0:11:20.72:159,21,0	0/1:22,0:22:99:233,0,140	0/1:13,0:13:65.57:66,0,93	0/1:26,0:26:96.39:170,0,96	1/1:15,1:16:30.22:241,30,0	0/1:26,0:26:28.36:257,0,28	0/0:34,0:34:3.59:0,4,364	0/1:10,0:10:21.16:21,0,61	1/1:14,0:13:11.64:181,12,0	1/1:20,0:18:14.20:75,14,0	1/1:28,0:28:23.25:351,23,0	0/1:19,0:18:99:227,0,173	0/1:11,0:11:99:132,0,133	0/1:26,0:26:38.08:160,0,38	1/1:2,23:25:6.02:137,6,0	0/1:24,0:23:99:215,0,136	1/1:17,1:18:30.64:428,31,0	0/1:14,0:13:99:123,0,136
chr10	63374033	.	TCTCA	T	5388.43	PASS	AB=1.000;AC=35;AF=0.625;AN=56;BaseQRankSum=-3.069;DP=577;FS=5.723;HRun=0;HaplotypeScore=107.4574;InbreedingCoeff=0.0675;MQ=64.31;MQ0=17;MQRankSum=-0.671;QD=12.86;ReadPosRankSum=-1.818;VQSLOD=3.7750;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:16,0:15:59.80:137,0,60	0/1:11,0:11:20.57:21,0,110	0/0:38,0:19:16.03:0,16,237	0/0:60,0:25:2.84:0,3,244	0/1:17,0:17:85.61:159,0,86	1/1:3,16:18:15.05:241,15,0	1/1:16,2:18:38.99:447,39,0	0/0:10,0:8:16.22:0,16,145	0/0:17,0:17:24.85:0,25,365	1/1:1,17:18:47.54:426,48,0	1/1:10,0:10:22.53:164,23,0	0/1:22,0:22:24.71:240,0,25	0/1:11,0:11:25.43:72,0,25	1/1:25,1:26:31.62:233,32,0	1/1:13,3:16:39:421,39,0	1/1:25,0:25:11.76:363,12,0	0/0:33,0:33:0.68:0,1,236	0/1:10,0:10:27.48:67,0,27	1/1:15,0:14:19.69:248,20,0	1/1:3,19:20:14.73:163,15,0	1/1:26,0:26:52.29:438,52,0	0/1:20,0:19:49.74:272,0,50	0/1:12,0:12:44.75:163,0,45	0/1:25,0:25:10.71:189,0,11	1/1:24,1:25:5.91:73,6,0	0/1:22,0:21:57.04:230,0,57	1/1:18,1:19:50.79:469,51,0	0/1:14,0:13:19.62:152,0,20
chr10	63374035	.	TCA	T	5757.27	PASS	AB=1.000;AC=43;AF=0.768;AN=56;BaseQRankSum=-1.366;DP=572;FS=8.782;HRun=0;HaplotypeScore=91.8646;InbreedingCoeff=0.6730;MQ=66.39;MQ0=15;MQRankSum=0.678;QD=13.58;ReadPosRankSum=0.899;VQSLOD=3.6480;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:14:8.22:185,8,0	0/0:11,0:11:22.94:0,23,154	0/0:39,0:21:17.04:0,17,255	0/0:61,0:26:2.55:0,3,243	1/1:15,2:17:1.26:290,1,0	1/1:19,0:18:14.95:117,15,0	1/1:19,0:19:41.87:339,42,0	0/0:10,0:10:25.65:0,26,229	0/0:17,0:17:3.14:0,3,268	1/1:18,0:18:47.78:374,48,0	1/1:10,0:10:23.71:182,24,0	1/1:20,1:21:42.30:365,42,0	1/1:9,0:9:16.61:145,17,0	1/1:23,2:25:56.33:458,56,0	1/1:16,0:16:38.91:324,39,0	1/1:24,1:25:22.90:485,23,0	0/1:35,0:35:47.50:47,0,207	0/0:10,0:10:1.78:0,2,58	1/1:14,0:13:3.99:205,4,0	1/1:20,0:19:14.57:99,15,0	1/1:25,0:25:53.76:449,54,0	1/1:20,0:19:25.59:305,26,0	1/1:12,0:12:29.42:218,29,0	1/1:25,0:25:18.17:197,18,0	1/1:25,0:25:5.93:44,6,0	1/1:20,1:20:40.29:297,40,0	1/1:19,0:19:44.89:369,45,0	1/1:14,0:13:34.12:263,34,0
chr10	63374164	.	TG	T	2583.13	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=9.023;DP=671;FS=5.816;HRun=3;HaplotypeScore=75.2575;InbreedingCoeff=0.9976;MQ=77.99;MQ0=0;MQRankSum=-2.116;QD=30.04;ReadPosRankSum=2.472;VQSLOD=3.4424;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,129,1857	0/0:6,0:6:18.02:0,18,235	0/0:28,0:27:74.73:0,75,1011	0/0:36,0:35:99:0,99,1296	0/0:20,0:20:54.18:0,54,771	0/0:22,0:22:63.20:0,63,889	0/0:12,0:12:30.10:0,30,432	0/0:28,0:28:75.24:0,75,1041	0/0:16,0:16:45.14:0,45,628	0/0:28,0:28:81.27:0,81,1158	0/0:22,0:22:63.21:0,63,905	0/0:24,0:24:69.23:0,69,993	1/1:2,18:20:54.17:666,54,0	0/0:21,0:21:63.18:0,63,884	0/0:21,0:21:63.21:0,63,907	0/0:19,0:19:48.15:0,48,674	0/0:23,0:24:72.05:0,72,984	0/0:27,0:27:78.22:0,78,1084	0/0:14,0:14:41.50:0,42,568	0/0:30,0:30:78.25:0,78,1104	0/0:42,0:41:99:0,120,1722	1/1:0,21:21:57.18:705,57,0	1/1:1,21:22:60.19:741,60,0	1/1:3,20:23:51.16:632,51,0	0/0:26,0:25:72.16:0,72,966	0/0:30,0:30:90.30:0,90,1296	0/0:24,0:24:66.19:0,66,906	0/0:17,0:17:51.17:0,51,720
chr10	63374428	.	A	AC	2899.59	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-0.659;DP=445;FS=0.000;HRun=0;HaplotypeScore=61.7764;InbreedingCoeff=0.9813;MQ=73.63;MQ0=0;MQRankSum=-1.905;QD=41.42;ReadPosRankSum=1.033;VQSLOD=4.1391;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:39.13:0,39,545	0/0:9,0:9:27.09:0,27,378	0/0:14,0:14:42.10:0,42,540	0/0:15,0:15:17.13:0,17,327	0/0:20,0:20:57.19:0,57,796	0/0:7,0:7:21.07:0,21,293	0/0:18,0:18:54.16:0,54,736	0/0:19,0:19:57.15:0,57,767	0/0:8,0:8:24.08:0,24,335	0/0:16,0:16:45.15:0,45,629	0/0:10,0:10:30.10:0,30,419	0/0:22,0:22:66.21:0,66,906	1/1:0,5:5:12.04:192,12,0	0/0:18,0:18:54.18:0,54,754	0/0:16,0:16:48.16:0,48,667	0/0:14,0:14:42.05:0,42,562	0/0:27,0:27:72.24:0,72,1005	0/0:25,0:24:63.19:0,63,856	0/0:10,0:10:30.10:0,30,419	0/0:19,0:19:54.17:0,54,739	0/0:13,0:13:23.80:0,24,334	1/1:0,20:20:57.19:909,57,0	1/1:0,30:30:87.30:1386,87,0	1/1:0,15:15:35.80:571,36,0	0/0:14,0:14:42.14:0,42,587	0/0:18,0:18:54.14:0,54,733	0/0:24,0:24:72.24:0,72,1006	0/0:6,0:6:15.05:0,15,210
chr10	63374614	.	TTGGCCTGGAATGC	T	1568.86	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.822;DP=603;FS=3.821;HRun=0;HaplotypeScore=221.4347;InbreedingCoeff=0.9954;MQ=69.02;MQ0=0;MQRankSum=-5.370;QD=112.06;ReadPosRankSum=2.048;VQSLOD=3.1383;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,105,6388	0/0:13,0:13:36.12:0,36,2352	0/0:17,0:17:33.58:0,34,1641	0/0:17,0:17:36.09:0,36,1511	0/0:18,0:18:48.16:0,48,2514	0/0:25,0:25:72.25:0,72,4450	0/0:30,0:30:69.19:0,69,3748	0/0:24,0:24:63.21:0,63,3421	1/1:0,14:14:42.14:1664,42,0	0/0:24,0:24:72.20:0,72,3850	0/0:19,0:19:51.18:0,51,2824	0/0:26,0:26:78.27:0,78,4817	0/0:19,0:19:57.20:0,57,3313	0/0:18,0:18:54.19:0,54,3336	0/0:30,0:30:90.31:0,90,5363	0/0:29,0:29:87.30:0,87,5309	0/0:22,0:22:63.20:0,63,3833	0/0:20,0:20:57.20:0,57,3630	0/0:15,0:15:39.13:0,39,2214	0/0:16,0:16:45.15:0,45,2725	0/0:26,0:26:69.24:0,69,4388	0/0:18,0:18:48.16:0,48,2806	0/0:19,0:19:51.13:0,51,2628	0/0:24,0:24:66.23:0,66,3807	0/0:19,0:18:48.16:0,48,3146	0/0:31,0:31:90.31:0,90,5671	0/0:23,0:23:69.24:0,69,4395	0/0:8,0:8:21.07:0,21,1288
chr10	63375006	.	ACCC	A	6483.39	PASS	AC=42;AF=0.778;AN=54;BaseQRankSum=5.166;DP=426;FS=7.247;HRun=6;HaplotypeScore=77.1539;InbreedingCoeff=0.8894;MQ=65.88;MQ0=21;MQRankSum=-8.256;QD=25.73;ReadPosRankSum=1.529;VQSLOD=1.6617;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,7:15:29.95:365,30,0	0/0:7,0:7:21.07:0,21,411	0/0:49,0:17:3.38:0,3,452	0/0:39,0:13:20.82:0,21,204	1/1:6,4:10:26.81:280,27,0	1/1:4,5:10:21.06:295,21,0	1/1:4,4:12:27.03:354,27,0	0/0:21,0:19:48.15:0,48,1017	1/1:3,2:6:17.92:209,18,0	1/1:6,7:14:36.12:533,36,0	1/1:14,5:20:43.53:473,44,0	1/1:5,6:12:31.12:350,31,0	1/1:0,0:8:15.05:188,15,0	1/1:5,5:11:28.56:330,29,0	1/1:8,4:12:23.34:248,23,0	1/1:8,6:14:34.94:382,35,0	0/0:31,0:31:75.23:0,75,1539	0/0:22,0:22:54.11:0,54,1029	1/1:3,8:11:24.91:295,25,0	1/1:11,4:17:37.58:433,38,0	1/1:3,1:3:2.51:35,3,0	1/1:3,0:8:20.95:231,21,0	1/1:2,0:7:9.03:111,9,0	./.	1/1:4,2:16:11.52:133,12,0	1/1:6,12:18:51.04:685,51,0	1/1:5,7:13:32.83:426,33,0	1/1:4,3:6:9.03:131,9,0
chr10	63376076	.	AC	A	5666.29	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=6.568;DP=722;FS=12.038;HRun=2;HaplotypeScore=86.9908;InbreedingCoeff=0.9997;MQ=85.16;MQ0=0;MQRankSum=-2.547;QD=36.09;ReadPosRankSum=3.733;VQSLOD=4.5198;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,51:51:99:1831,141,0	0/0:16,0:16:48.15:0,48,699	0/0:28,0:28:78.15:0,78,1040	0/0:25,0:25:66.20:0,66,938	1/1:0,27:27:75.24:974,75,0	0/0:25,0:25:72.24:0,72,1073	0/0:25,0:25:69.23:0,69,1034	0/0:31,0:31:90.29:0,90,1313	1/1:1,32:33:90.29:1169,90,0	0/0:35,0:35:99:0,102,1505	0/0:23,0:23:69.23:0,69,1034	0/0:21,0:21:63.20:0,63,923	0/0:20,0:20:60.20:0,60,898	0/0:22,0:22:66.21:0,66,968	0/0:23,0:23:69.23:0,69,1034	0/0:23,0:23:69.22:0,69,998	0/0:29,0:29:84.27:0,84,1240	0/0:10,0:10:27.09:0,27,405	0/0:19,0:19:54.17:0,54,790	0/0:24,0:24:69.22:0,69,1009	0/0:34,0:34:99:0,102,1526	0/0:30,0:30:90.30:0,90,1330	0/0:32,0:32:96.32:0,96,1431	0/0:20,0:20:60.18:0,60,861	0/0:20,0:20:54.18:0,54,809	1/1:1,34:35:60.35:1264,60,0	0/0:30,0:30:87.28:0,87,1279	1/1:0,11:11:33.11:429,33,0
chr10	63376115	.	AG	A	3170.69	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=5.986;DP=699;FS=5.135;HRun=2;HaplotypeScore=85.0232;InbreedingCoeff=0.9991;MQ=85.08;MQ0=0;MQRankSum=-1.172;QD=34.84;ReadPosRankSum=-1.724;VQSLOD=3.1818;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,160,2357	1/1:0,12:12:36.12:467,36,0	0/0:28,1:29:23.45:0,23,969	0/0:17,0:17:39.12:0,39,532	0/0:29,0:28:87.28:0,87,1282	0/0:22,0:22:66.22:0,66,989	0/0:22,0:22:66.22:0,66,988	1/1:2,28:30:84.19:1073,84,0	0/0:28,0:28:72.24:0,72,1075	0/0:23,0:23:69.23:0,69,1030	0/0:18,0:18:54.17:0,54,788	0/0:27,0:27:81.27:0,81,1195	0/0:24,0:24:66.21:0,66,968	0/0:22,0:22:66.20:0,66,949	0/0:28,0:28:84.27:0,84,1238	0/0:21,0:21:63.21:0,63,942	1/1:1,35:36:99:1363,105,0	1/1:0,13:13:33.11:428,33,0	0/0:15,0:15:39.70:0,40,604	0/0:27,0:27:81.27:0,81,1213	0/0:41,0:41:99:0,120,1759	0/0:23,0:23:69.23:0,69,1033	0/0:29,0:29:84.27:0,84,1231	0/0:17,0:17:51.17:0,51,764	0/0:25,0:25:72.24:0,72,1075	0/0:24,0:24:69.23:0,69,1016	0/0:31,0:31:90.28:0,90,1309	0/0:11,0:11:33.11:0,33,494
chr10	63376607	.	GA	G	608.60	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=4.794;DP=524;FS=11.627;HRun=8;HaplotypeScore=93.4064;InbreedingCoeff=0.9373;MQ=59.30;MQ0=5;MQRankSum=1.364;QD=10.32;ReadPosRankSum=1.957;VQSLOD=1.2488;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:87.16:0,87,1132	0/0:11,0:11:29.96:0,30,341	0/0:4,0:2:3.01:0,3,36	0/0:8,0:8:22.55:0,23,219	0/0:26,0:26:51.29:0,51,515	0/0:18,0:18:45.02:0,45,511	0/0:29,0:29:60.13:0,60,697	0/0:28,0:28:78.19:0,78,912	0/0:13,0:13:33.09:0,33,386	0/0:23,0:23:57.16:0,57,670	0/0:12,0:11:27.08:0,27,326	0/0:19,0:19:51.13:0,51,600	1/1:18,2:20:43.67:299,44,0	0/0:16,0:16:33.09:0,33,387	0/0:8,0:8:18.05:0,18,213	0/0:21,0:21:54.17:0,54,650	0/0:33,1:34:58.25:0,58,949	0/0:29,0:29:72.18:0,72,851	0/0:19,1:20:28.21:0,28,623	0/0:15,0:15:39.11:0,39,460	0/0:15,0:12:30.06:0,30,346	1/1:8,0:8:18.70:136,19,0	1/1:10,0:10:11.65:79,12,0	1/1:21,0:21:42.23:252,42,0	0/0:18,0:18:51.16:0,51,616	0/0:22,1:22:55.70:0,56,643	0/0:22,0:22:54.12:0,54,625	0/0:8,0:8:23.66:0,24,263
chr10	63376617	.	G	GA	2714.29	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=1.235;DP=530;FS=0.000;HRun=9;HaplotypeScore=90.4932;InbreedingCoeff=0.9117;MQ=62.16;MQ0=2;MQRankSum=-0.903;QD=19.53;ReadPosRankSum=0.356;VQSLOD=3.6335;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:13,27:40:67.12:936,67,0	0/0:13,0:13:35.88:0,36,299	0/0:6,0:3:6:0,6,52	0/0:9,0:9:23.39:0,23,167	1/1:1,26:28:77.92:784,78,0	0/0:16,0:17:44.49:0,44,374	0/0:24,0:25:61.95:0,62,519	0/0:30,0:30:77.84:0,78,654	1/1:2,11:13:30.08:332,30,0	0/0:24,0:24:62.97:0,63,543	0/0:10,0:11:32.03:0,32,267	0/0:22,0:23:44:0,44,367	1/1:16,0:16:35.60:243,36,0	0/0:15,0:15:35.98:0,36,312	0/0:8,0:8:14.98:0,15,130	0/0:24,0:24:37.25:0,37,449	0/0:33,0:33:89.92:0,90,770	0/0:25,0:25:68.98:0,69,599	0/0:23,0:23:53.96:0,54,465	0/0:15,1:16:5.80:0,6,276	0/0:14,0:12:26.98:0,27,231	1/1:8,1:9:17:136,17,0	1/1:11,1:12:19.51:146,20,0	1/1:20,1:21:48.86:332,49,0	0/0:21,0:22:50.98:0,51,443	0/0:20,0:19:28.21:0,28,435	0/0:19,1:20:0.29:0,0,385	0/0:13,0:13:29.85:0,30,249
chr10	63376647	.	C	CT	4974.13	PASS	AB=0.713;AC=41;AF=0.732;AN=56;BaseQRankSum=8.408;DP=542;FS=1.901;HRun=12;HaplotypeScore=93.8684;InbreedingCoeff=0.5392;MQ=68.33;MQ0=1;MQRankSum=-0.926;QD=11.46;ReadPosRankSum=3.242;VQSLOD=4.8346;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,28:36:41:527,41,0	0/0:10,0:10:26.84:0,27,196	0/0:14,0:11:4.88:0,5,97	0/1:11,1:9:22.42:22,0,22	0/1:13,15:30:15.21:464,0,15	1/1:19,0:19:40.24:166,40,0	1/1:26,0:26:56.47:236,56,0	0/0:29,0:29:35.44:0,35,253	0/0:15,0:18:12.69:0,13,221	1/1:28,0:28:64.28:264,64,0	1/1:16,0:16:40.34:168,40,0	1/1:26,0:26:64.74:273,65,0	1/1:8,7:15:28.85:263,29,0	1/1:11,0:12:26.85:111,27,0	1/1:12,0:12:29.46:121,29,0	1/1:19,0:20:51.05:212,51,0	0/0:37,0:37:97.26:0,97,690	0/1:18,4:23:5.22:5,0,277	1/1:16,0:16:37.66:157,38,0	1/1:16,0:16:34.94:145,35,0	1/1:8,0:8:16.07:66,16,0	1/1:2,13:15:36.06:350,36,0	0/1:5,14:19:7.75:256,0,8	0/1:5,16:23:24.66:288,0,25	1/1:20,0:20:37.50:154,37,0	1/1:2,10:12:8.13:234,8,0	1/1:18,0:17:40.09:164,40,0	1/1:1,10:12:35.85:325,36,0
chr10	63376652	.	T	TTA	10218.09	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-16.038;DP=550;FS=0.335;HRun=0;HaplotypeScore=88.0352;InbreedingCoeff=0.9973;MQ=72.36;MQ0=1;MQRankSum=-0.002;QD=42.58;ReadPosRankSum=5.864;VQSLOD=6.1185;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:62.23:0,62,422	0/0:10,0:10:30.07:0,30,423	0/0:18,0:15:32.08:0,32,386	0/0:12,0:9:19.43:0,19,165	0/0:30,0:30:41.33:0,41,458	1/1:1,18:19:45.14:746,45,0	1/1:1,24:26:63.20:1045,63,0	0/0:28,0:28:76.03:0,76,891	0/0:18,0:18:50.91:0,51,635	1/1:2,26:30:87.19:1315,87,0	1/1:0,17:18:51.02:779,51,0	1/1:2,24:26:75.24:1214,75,0	0/0:14,0:14:38.49:0,38,226	1/1:0,11:13:30.10:497,30,0	1/1:0,11:11:33.11:548,33,0	1/1:1,19:20:57.19:936,57,0	0/0:34,0:34:99:0,102,1483	0/0:23,0:23:62.64:0,63,773	1/1:1,15:16:45.13:713,45,0	1/1:1,14:15:42.06:664,42,0	1/1:1,7:8:18.05:299,18,0	0/0:15,0:15:42.54:0,43,224	0/0:20,0:20:39.64:0,40,256	0/0:25,0:25:42.61:0,43,387	1/1:0,19:19:45.09:716,45,0	0/0:12,0:12:29.59:0,30,176	1/1:1,17:18:44.91:745,45,0	0/0:13,0:13:21.76:0,22,159
chr10	63377180	.	G	GTGAGTCCATGACCA	78984.17	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-1.327;DP=688;FS=1.096;HRun=0;HaplotypeScore=239.9354;InbreedingCoeff=0.9908;MQ=56.78;MQ0=0;MQRankSum=-17.036;QD=148.47;ReadPosRankSum=3.289;VQSLOD=5.1987;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:28,14:48:96.80:6260,97,0	0/0:12,0:12:33.11:0,33,1355	0/0:19,0:19:57.18:0,57,2174	0/0:23,0:23:60.20:0,60,2159	1/1:20,4:27:30.10:2072,30,0	1/1:12,5:19:42.14:2729,42,0	1/1:18,11:29:81.28:5065,81,0	0/0:29,0:29:84.25:0,84,2792	1/1:15,14:31:84.29:4988,84,0	1/1:12,9:27:81.23:4293,81,0	1/1:8,4:15:24.08:1681,24,0	1/1:9,11:21:60.21:3909,60,0	1/1:18,12:33:90.27:5677,90,0	1/1:6,13:19:57.20:3657,57,0	1/1:18,15:36:93.32:5932,93,0	1/1:12,9:24:55.65:3821,56,0	0/0:36,0:36:99:0,105,4296	0/0:37,0:37:99:0,111,4474	1/1:16,2:19:47.81:2401,48,0	1/1:10,9:21:51.18:3584,51,0	1/1:12,1:17:18.06:1065,18,0	1/1:16,5:22:57.12:3778,57,0	1/1:6,5:15:21.05:1422,21,0	1/1:9,10:22:48.16:3254,48,0	1/1:13,3:21:45.15:2783,45,0	1/1:17,7:31:93.27:4927,93,0	1/1:15,11:30:75.26:4951,75,0	1/1:1,3:5:12.04:735,12,0
chr10	63377664	.	AAAAAG	A	2841.84	PASS	AB=0.883;AC=36;AF=0.643;AN=56;BaseQRankSum=2.126;DP=385;FS=18.232;HRun=0;HaplotypeScore=82.7781;InbreedingCoeff=0.3345;MQ=43.82;MQ0=21;MQRankSum=4.087;QD=9.80;ReadPosRankSum=5.700;VQSLOD=0.4970;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:9,0:27:17.33:177,17,0	0/0:4,0:3:5.54:0,6,25	0/1:10,0:3:9.66:10,0,29	0/0:7,0:1:3.01:0,3,48	1/1:7,0:21:34.25:310,34,0	0/1:12,2:12:3.46:180,0,3	1/1:4,9:12:11.99:182,12,0	0/0:24,0:21:53.14:0,53,425	0/1:11,0:10:20.53:94,0,21	1/1:9,8:17:18.61:232,19,0	1/1:3,6:8:11.84:110,12,0	1/1:9,0:9:16.25:151,16,0	0/1:9,0:9:5.65:6,0,30	1/1:3,11:14:5.69:102,6,0	1/1:2,10:11:2.86:51,3,0	1/1:6,6:12:3.37:193,3,0	0/0:22,0:22:29.58:0,30,216	0/0:23,0:22:52.75:0,53,483	1/1:8,4:10:19.25:250,19,0	0/1:3,12:15:1.44:310,0,1	1/1:4,0:4:3.76:47,4,0	0/1:10,0:9:34.19:34,0,64	0/1:13,0:13:25.36:25,0,88	0/0:15,0:12:14.34:0,14,88	1/1:4,12:16:11.87:177,12,0	1/1:4,0:17:19.89:146,20,0	0/1:5,7:11:1.48:46,0,1	1/1:3,0:11:18:186,18,0
chr10	63377667	.	AAG	A	1961.18	PASS	AB=0.986;AC=47;AF=0.839;AN=56;BaseQRankSum=3.488;DP=358;FS=2.832;HRun=0;HaplotypeScore=68.4615;InbreedingCoeff=0.2072;MQ=45.08;MQ0=20;MQRankSum=0.078;QD=6.07;ReadPosRankSum=1.177;VQSLOD=2.9482;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:21:16.16:78,16,0	1/1:4,0:3:5.32:23,5,0	0/1:13,0:5:6.98:7,0,42	0/0:8,0:1:3:0,3,28	1/1:18,1:18:33.57:186,34,0	1/1:13,0:11:19.83:175,20,0	1/1:11,0:11:11.98:104,12,0	0/0:26,1:24:5.87:0,6,154	1/1:11,0:10:17.72:119,18,0	1/1:9,3:12:22.50:174,22,0	1/1:8,0:7:11.88:81,12,0	1/1:7,0:7:16.14:126,16,0	1/1:9,0:9:7.38:37,7,0	1/1:12,0:12:5.97:44,6,0	1/1:12,0:11:2.98:22,3,0	0/1:9,0:9:1.74:71,0,2	0/1:22,0:22:9.89:12,0,10	0/1:22,0:21:6.10:6,0,198	1/1:11,1:10:10.67:148,11,0	1/1:15,0:15:17.45:200,17,0	1/1:3,0:3:4.05:48,4,0	1/1:10,0:9:10.94:66,11,0	0/1:12,0:13:7.56:45,0,8	1/1:14,0:11:3.74:13,4,0	1/1:14,0:14:10.99:71,11,0	1/1:14,1:16:20.46:128,20,0	1/1:10,0:9:0.82:18,1,0	1/1:11,0:10:17.22:94,17,0
chr10	63377668	.	AG	A	1891.72	PASS	AB=0.981;AC=49;AF=0.875;AN=56;BaseQRankSum=2.887;DP=335;FS=0.799;HRun=1;HaplotypeScore=59.6604;InbreedingCoeff=0.0196;MQ=46.09;MQ0=18;MQRankSum=-0.994;QD=5.79;ReadPosRankSum=-0.137;VQSLOD=0.3273;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:21:9.24:61,9,0	1/1:1,3:3:6.02:65,6,0	0/1:13,0:5:7.20:7,0,42	0/0:8,0:1:3:0,3,27	1/1:19,0:18:33.26:170,33,0	1/1:11,0:9:15.75:155,16,0	1/1:9,2:11:11.80:79,12,0	0/1:25,0:22:77.37:77,0,121	1/1:9,0:10:20.20:123,20,0	1/1:12,0:12:14.93:151,15,0	1/1:7,0:6:11.80:76,12,0	1/1:7,0:7:14.08:103,14,0	1/1:7,0:8:8.82:58,9,0	1/1:12,0:12:5.81:33,6,0	1/1:11,1:11:2.73:16,3,0	0/1:9,0:9:1.11:56,0,1	0/1:20,1:21:12.93:41,0,13	0/1:19,1:20:50.45:50,0,155	1/1:12,0:10:1.54:91,2,0	1/1:15,0:15:12.73:161,13,0	1/1:3,0:3:6.47:53,6,0	1/1:3,1:4:10.72:64,11,0	1/1:5,0:12:10.25:51,10,0	1/1:6,0:6:5.87:36,6,0	1/1:14,0:14:3.86:42,4,0	1/1:16,0:16:12.24:108,12,0	1/1:10,0:9:2.40:16,2,0	1/1:11,0:10:15.71:74,16,0
chr10	63377886	.	TAC	T	1156.14	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.390;DP=653;FS=7.721;HRun=0;HaplotypeScore=85.3919;InbreedingCoeff=0.9979;MQ=78.76;MQ0=0;MQRankSum=-3.985;QD=37.29;ReadPosRankSum=1.261;VQSLOD=5.7352;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,129,2440	0/0:8,0:8:24.08:0,24,463	0/0:17,0:17:51.17:0,51,940	0/0:21,0:23:57.80:0,58,1040	0/0:34,0:34:90.29:0,90,1696	0/0:21,0:21:63.22:0,63,1216	0/0:19,0:19:54.19:0,54,1043	0/0:31,0:31:90.31:0,90,1734	0/0:30,0:30:87.30:0,87,1668	0/0:20,0:20:60.21:0,60,1159	0/0:25,0:25:75.22:0,75,1410	0/0:20,0:20:60.21:0,60,1140	0/0:15,0:15:45.15:0,45,855	0/0:21,0:21:57.19:0,57,1057	0/0:22,0:22:63.22:0,63,1207	0/0:17,0:17:51.17:0,51,976	0/0:28,0:28:84.29:0,84,1612	0/0:25,0:25:72.20:0,72,1340	0/0:24,0:24:66.19:0,66,1207	0/0:35,0:35:99:0,102,1959	0/0:38,0:38:99:0,111,2108	0/0:20,0:20:45.15:0,45,868	0/0:20,0:20:54.19:0,54,1042	0/0:18,0:18:54.19:0,54,1032	0/0:26,0:26:75.26:0,75,1432	1/1:0,21:21:63.12:910,63,0	0/0:21,0:20:63.20:0,63,1154	1/1:0,10:10:24.08:367,24,0
chr10	63378307	.	T	TAAGTA	9580.27	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-0.453;DP=406;FS=4.584;HRun=0;HaplotypeScore=93.8359;InbreedingCoeff=0.9724;MQ=58.68;MQ0=7;MQRankSum=-8.601;QD=72.58;ReadPosRankSum=1.322;VQSLOD=6.5252;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,18:21:53.21:1488,53,0	0/0:2,0:2:6.02:0,6,130	0/0:12,0:5:14.07:0,14,198	0/0:20,0:7:18.05:0,18,299	1/1:10,14:25:57.15:1598,57,0	0/0:11,0:11:21.07:0,21,456	0/0:8,0:8:24.08:0,24,468	0/0:30,0:30:84.27:0,84,1652	1/1:0,7:7:21.07:665,21,0	0/0:18,0:18:45.13:0,45,844	0/0:20,0:19:48:0,48,1021	0/0:8,0:8:24.08:0,24,482	1/1:1,7:8:21.07:658,21,0	0/0:11,0:11:33.11:0,33,696	0/0:14,0:14:42.13:0,42,864	0/0:14,0:14:39.12:0,39,808	0/0:13,0:13:36.11:0,36,741	0/0:21,0:21:60.21:0,60,1282	0/0:14,0:14:36.09:0,36,646	0/0:21,0:21:63.22:0,63,1337	0/0:12,0:12:33.10:0,33,650	1/1:6,3:9:15.04:404,15,0	1/1:2,10:12:36.12:1113,36,0	1/1:1,9:11:21.07:584,21,0	0/0:17,0:16:51.18:0,51,1107	1/1:5,19:27:69.24:1931,69,0	0/0:7,0:7:18.06:0,18,381	1/1:1,11:12:36.12:1138,36,0
chr10	63378321	.	GGTGT	G	946.35	PASS	AB=0.750;AC=21;AF=0.389;AN=54;BaseQRankSum=5.600;DP=406;FS=0.744;HRun=0;HaplotypeScore=105.3058;InbreedingCoeff=0.7022;MQ=53.67;MQ0=19;MQRankSum=-3.291;QD=5.84;ReadPosRankSum=0.455;VQSLOD=2.3674;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:23:6.01:56,6,0	1/1:1,1:2:3.01:47,3,0	./.	0/0:25,0:5:0.47:0,0,1	1/1:12,0:22:24.50:175,25,0	0/0:8,0:15:21.01:0,21,317	0/0:8,0:8:12.01:0,12,235	1/1:24,0:24:2.03:23,2,0	0/0:8,0:8:2.22:0,2,7	0/0:11,0:15:17.46:0,17,174	0/0:17,0:19:29.84:0,30,606	0/0:8,0:8:15.05:0,15,329	1/1:5,0:7:6.01:56,6,0	0/0:8,0:9:14.79:0,15,257	0/0:15,0:15:24:0,24,434	0/0:13,0:13:18.06:0,18,417	1/1:8,9:17:18.06:283,18,0	1/1:16,6:23:16.35:261,16,0	0/0:14,0:15:10.58:0,11,116	0/0:13,0:14:11.78:0,12,203	0/1:10,3:15:61.89:62,0,416	1/1:3,0:7:9.01:84,9,0	1/1:10,0:12:6.01:56,6,0	1/1:7,0:8:3:28,3,0	0/0:14,0:15:23.55:0,24,417	0/0:21,0:23:24.02:0,24,410	0/0:8,0:10:14.52:0,15,238	0/0:12,0:12:21.07:0,21,424
chr10	63378995	.	C	CT	122.88	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-2.029;DP=401;FS=0.000;HRun=6;HaplotypeScore=59.2269;InbreedingCoeff=0.8925;MQ=77.56;MQ0=1;MQRankSum=-0.392;QD=12.29;ReadPosRankSum=-2.255;VQSLOD=1.6333;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:49.66:0,50,493	0/0:5,0:5:15.03:0,15,153	0/0:14,0:14:22.25:0,22,194	0/0:24,0:13:27.02:0,27,265	0/0:15,0:15:36.07:0,36,367	0/0:19,0:19:39.09:0,39,398	0/0:8,0:8:24.05:0,24,245	0/0:37,0:37:90.18:0,90,913	1/1:5,5:10:18.04:213,18,0	0/0:14,0:14:39.08:0,39,393	0/0:12,0:12:27.05:0,27,275	0/0:8,0:8:24.05:0,24,245	0/0:9,0:9:21.03:0,21,208	0/0:10,0:10:30.07:0,30,306	0/0:8,0:8:21.05:0,21,214	0/0:8,0:8:21.04:0,21,214	0/0:27,0:27:75.17:0,75,765	0/0:15,0:15:42.09:0,42,429	0/0:13,0:13:30.07:0,30,306	0/0:13,0:13:33.07:0,33,336	0/0:5,0:5:9.02:0,9,92	0/0:7,0:7:21.05:0,21,214	0/0:12,0:12:27.04:0,27,269	0/0:8,0:8:18.04:0,18,183	0/0:23,0:23:66.13:0,66,665	0/0:16,0:16:45.10:0,45,459	0/0:18,0:18:45.10:0,45,459	0/0:25,0:25:69.09:0,69,675
chr10	63379015	.	CT	C	2269.54	PASS	AB=0.984;AC=27;AF=0.482;AN=56;BaseQRankSum=3.635;DP=382;FS=17.645;HRun=9;HaplotypeScore=55.5185;InbreedingCoeff=0.8887;MQ=68.21;MQ0=11;MQRankSum=0.281;QD=12.33;ReadPosRankSum=1.580;VQSLOD=1.3965;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:36.11:0,36,415	0/0:7,0:7:15.02:0,15,160	0/0:38,0:19:13.41:0,13,230	0/1:61,1:20:0.26:0,0,124	0/0:14,0:14:33.10:0,33,380	1/1:14,5:19:33.01:302,33,0	1/1:3,4:7:18:159,18,0	0/0:34,0:34:78.22:0,78,891	0/0:6,0:6:18.05:0,18,206	1/1:5,2:7:12:110,12,0	1/1:5,4:9:21:188,21,0	1/1:3,4:7:18:161,18,0	0/0:4,0:4:12.04:0,12,138	1/1:6,2:8:15:137,15,0	1/1:4,3:7:18:161,18,0	1/1:4,1:5:9:82,9,0	0/0:24,0:24:57.16:0,57,650	0/0:16,0:16:36.06:0,36,400	1/1:8,3:11:20.64:183,21,0	1/1:4,2:6:12:110,12,0	1/1:0,1:1:3:27,3,0	0/0:4,0:4:9.03:0,9,101	0/0:5,0:5:12.03:0,12,138	0/0:4,0:4:12.04:0,12,138	1/1:8,10:18:51.03:467,51,0	0/0:14,0:14:39.12:0,39,450	1/1:13,3:16:44.98:400,45,0	0/0:12,0:12:36.11:0,36,415
chr10	63379039	.	T	TA	5126.85	PASS	AB=1.000;AC=37;AF=0.712;AN=52;BaseQRankSum=-2.366;DP=425;FS=0.000;HRun=8;HaplotypeScore=63.3502;InbreedingCoeff=0.7857;MQ=75.50;MQ0=15;MQRankSum=0.895;QD=25.76;ReadPosRankSum=3.168;VQSLOD=5.5188;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,12:15:33.10:379,33,0	0/0:5,0:5:14.99:0,15,131	0/0:73,0:27:29.39:0,29,265	0/0:76,2:29:33.38:0,33,215	1/1:1,11:12:33.10:378,33,0	1/1:11,4:15:33.10:381,33,0	1/1:0,3:3:9.03:104,9,0	0/0:32,0:32:74.98:0,75,671	1/1:0,8:8:21.06:242,21,0	1/1:3,3:6:18.03:191,18,0	1/1:6,3:9:21.05:233,21,0	1/1:0,6:6:12.04:138,12,0	0/1:6,0:6:6.31:32,0,6	1/1:3,2:5:15.04:173,15,0	1/1:4,1:5:11.98:114,12,0	1/1:4,2:6:12.02:128,12,0	0/0:19,0:19:45.01:0,45,407	0/0:16,0:16:45:0,45,404	1/1:10,4:14:24.05:260,24,0	1/1:6,3:9:17.80:197,18,0	./.	./.	0/1:2,0:2:0:0,0,0	0/1:7,0:7:4.13:27,0,4	1/1:14,8:22:54:578,54,0	1/1:3,13:16:39.08:429,39,0	1/1:12,6:18:54.16:622,54,0	1/1:0,15:15:45.13:519,45,0
chr10	63379051	.	TG	T	377.37	PASS	AB=1.000;AC=7;AF=0.130;AN=54;BaseQRankSum=2.299;DP=396;FS=1.967;HRun=1;HaplotypeScore=71.8436;InbreedingCoeff=0.7378;MQ=67.26;MQ0=23;MQRankSum=-0.899;QD=5.39;ReadPosRankSum=-1.005;VQSLOD=0.2126;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:15:39.12:0,39,502	0/0:6,0:6:18.06:0,18,248	0/0:48,4:17:23.19:0,23,256	0/1:55,0:20:15.22:15,0,176	0/0:15,0:15:39.04:0,39,461	0/0:17,0:17:39.12:0,39,499	0/0:3,0:3:9.03:0,9,107	0/0:31,0:26:75.21:0,75,1017	0/0:10,0:9:20.93:0,21,243	0/0:6,0:6:18.05:0,18,227	0/0:9,0:9:21.06:0,21,267	0/0:8,0:8:15.04:0,15,184	1/1:5,2:7:21.03:244,21,0	0/0:6,0:6:15.05:0,15,192	0/0:7,0:7:17.92:0,18,192	0/0:8,0:8:20.93:0,21,235	0/0:18,0:18:48.06:0,48,620	0/0:18,0:17:47.99:0,48,594	0/0:17,0:15:42.10:0,42,540	0/0:8,0:8:20.69:0,21,233	0/0:1,0:1:0:0,0,0	./.	1/1:2,0:2:5.95:42,6,0	1/1:4,2:6:18.05:213,18,0	0/0:20,0:20:53.76:0,54,632	0/0:15,0:15:45.03:0,45,564	0/0:20,0:19:54.08:0,54,654	0/0:15,0:15:45.15:0,45,587
chr10	63379842	.	T	TTG	8783.69	PASS	AB=0.674;AC=29;AF=0.537;AN=54;BaseQRankSum=-9.611;DP=766;FS=9.279;HRun=0;HaplotypeScore=148.1278;InbreedingCoeff=-0.0186;MQ=61.65;MQ0=12;MQRankSum=-0.024;QD=15.07;ReadPosRankSum=-0.383;VQSLOD=4.4277;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:40,0:40:11.36:118,11,0	0/1:7,6:13:99:184,0,99	0/0:22,0:16:14.85:0,15,135	0/0:29,0:19:7.20:0,7,82	./.	0/1:15,18:35:99:527,0,117	1/1:15,7:24:3.77:190,4,0	0/1:23,8:31:4.67:228,0,5	0/1:14,17:34:94.93:683,0,95	0/1:27,13:40:59.94:588,0,60	1/1:2,11:14:27.09:417,27,0	0/1:11,15:25:18.43:643,0,18	0/0:10,0:31:42.71:0,43,214	0/1:16,19:35:99:461,0,117	1/1:11,19:29:47.52:701,48,0	1/1:8,20:27:12.05:617,12,0	1/1:6,14:21:33.01:524,33,0	0/1:7,11:19:34.63:221,0,35	0/1:11,5:16:33.36:237,0,33	0/1:9,13:22:63.84:415,0,64	0/1:25,27:52:99:741,0,119	0/0:3,0:20:25.57:0,26,126	0/0:7,0:27:14.15:0,14,70	0/0:11,0:36:39.77:0,40,196	0/1:7,9:15:16.26:213,0,16	1/1:20,2:30:46.71:493,47,0	0/1:14,16:29:61.88:569,0,62	1/1:9,0:18:2.74:12,3,0
chr10	63380168	.	CGTGCGTGT	C	6711.45	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=14.901;DP=963;FS=1.324;HRun=0;HaplotypeScore=269.7659;InbreedingCoeff=0.9834;MQ=57.94;MQ0=5;MQRankSum=-9.797;QD=24.67;ReadPosRankSum=1.641;VQSLOD=4.2343;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:17,32:49:22.38:543,22,0	0/0:12,0:12:33.11:0,33,1262	0/0:36,0:27:31.30:0,31,912	0/0:38,0:27:45.05:0,45,1376	1/1:8,12:20:8.90:232,9,0	0/0:27,0:27:69.18:0,69,2400	0/0:34,0:34:60.16:0,60,1960	0/0:33,0:33:36.11:0,36,1000	1/1:15,29:44:54.19:1393,54,0	0/0:51,0:51:99:0,120,3956	0/0:15,0:15:30.10:0,30,1182	0/0:42,0:42:96.27:0,96,3528	1/1:32,0:32:62.94:1228,63,0	0/0:49,0:49:99:0,120,4449	0/0:33,0:33:63.19:0,63,2332	0/0:43,0:43:99:0,102,3701	0/0:45,0:45:99:0,109,4117	0/0:49,0:49:99:0,105,3609	0/0:28,0:28:51.13:0,51,1710	0/0:28,0:28:63.20:0,63,2163	0/0:82,0:81:99:0,147,5091	1/1:20,0:20:21.04:435,21,0	1/1:23,0:23:15.52:387,16,0	1/1:36,0:36:18.59:353,19,0	0/0:24,0:23:66.23:0,66,2533	1/1:11,27:37:78.03:1752,78,0	0/0:22,0:22:60.17:0,60,2169	1/1:2,8:10:15.05:387,15,0
chr10	63380172	.	CGTGTGT	C	2963.14	PASS	AB=0.884;AC=10;AF=0.179;AN=56;BaseQRankSum=14.471;DP=942;FS=1.294;HRun=0;HaplotypeScore=241.6304;InbreedingCoeff=-0.0029;MQ=57.04;MQ0=5;MQRankSum=-10.305;QD=11.22;ReadPosRankSum=3.850;VQSLOD=2.3437;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:46,0:46:99:204,0,162	0/0:14,0:14:39.12:0,39,1238	0/0:36,0:26:61.39:0,61,1416	0/0:37,0:27:62.46:0,62,1728	0/1:20,0:20:79.95:80,0,153	0/0:26,0:26:75.26:0,75,2448	0/0:36,0:36:99:0,99,2592	0/0:26,0:26:78.24:0,78,1781	0/1:40,0:41:99:542,0,157	0/0:50,0:50:99:0,147,4418	0/0:14,0:14:42.12:0,42,1225	0/0:42,0:42:99:0,120,3668	0/1:19,15:34:39.30:693,0,39	0/0:48,0:48:99:0,144,4512	0/0:31,0:31:84.27:0,84,2532	0/0:42,0:42:99:0,126,3906	0/0:46,0:46:99:0,127,4064	0/0:48,0:48:99:0,142,3939	0/0:26,0:26:78.18:0,78,2016	0/0:27,0:27:81.26:0,81,2402	0/0:79,0:78:99:0,208,5819	1/1:9,10:19:7.52:277,8,0	0/1:10,13:23:26.62:261,0,27	0/1:24,11:35:25.01:293,0,25	0/0:25,0:24:72.25:0,72,2517	0/1:36,0:35:99:608,0,322	0/0:23,0:23:69.21:0,69,2220	0/1:10,0:10:40.86:152,0,41
chr10	63380180	.	CGT	C	690.03	PASS	AB=0.859;AC=9;AF=0.161;AN=56;BaseQRankSum=14.344;DP=925;FS=0.419;HRun=0;HaplotypeScore=179.7413;InbreedingCoeff=-0.1899;MQ=56.42;MQ0=6;MQRankSum=-11.689;QD=2.67;ReadPosRankSum=6.173;VQSLOD=1.5569;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:43,0:43:49.86:50,0,65	0/0:13,0:13:36.12:0,36,637	0/0:37,0:27:66.59:0,67,992	0/0:36,0:28:49.59:0,50,1055	0/1:20,0:20:16.79:17,0,55	0/0:30,0:30:87.28:0,87,1479	0/0:32,0:32:84.26:0,84,1402	0/0:23,0:23:54.18:0,54,912	0/1:35,0:35:89.92:139,0,90	0/0:51,0:51:99:0,141,2350	0/0:13,0:13:33.11:0,33,579	0/0:40,0:40:99:0,120,2054	0/1:20,15:35:99:205,0,337	0/0:45,0:45:99:0,126,2207	0/0:31,0:31:84.73:0,85,1405	0/0:43,0:43:99:0,117,1968	0/0:49,0:49:99:0,123,2079	0/0:47,0:47:99:0,123,2058	0/0:25,0:25:69.22:0,69,1143	0/0:29,0:29:75.24:0,75,1274	0/0:71,0:70:99:0,178,2955	0/1:9,10:19:75.11:75,0,78	0/1:8,13:21:23.60:89,0,24	0/1:24,11:35:91.31:91,0,106	0/0:27,0:26:78.27:0,78,1375	0/1:39,0:38:99:130,0,398	0/0:22,0:22:66.20:0,66,1135	0/1:11,0:11:34.44:34,0,70
chr10	63380835	.	CCTGT	C	4066.59	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=12.848;DP=680;FS=7.786;HRun=0;HaplotypeScore=117.2848;InbreedingCoeff=1.0000;MQ=78.13;MQ0=0;MQRankSum=-6.146;QD=48.41;ReadPosRankSum=2.550;VQSLOD=4.1856;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,142,3824	0/0:13,0:13:39.13:0,39,1050	0/0:29,0:28:79.74:0,80,2019	0/0:22,0:22:60.21:0,60,1567	0/0:23,0:23:69.24:0,69,1832	0/0:19,0:19:57.20:0,57,1552	0/0:20,0:20:60.21:0,60,1606	0/0:33,0:33:99:0,99,2692	0/0:19,0:19:57.20:0,57,1525	0/0:33,0:33:99:0,99,2675	0/0:24,0:24:69.24:0,69,1878	0/0:27,0:27:81.28:0,81,2173	1/1:0,16:16:45.15:872,45,0	0/0:21,0:21:60.21:0,60,1643	0/0:39,0:39:99:0,117,3167	0/0:24,0:24:72.25:0,72,1944	0/0:25,0:25:72.25:0,72,1925	0/0:18,0:18:48.16:0,48,1305	0/0:28,0:28:84.24:0,84,2001	0/0:19,0:19:54.19:0,54,1469	0/0:30,0:30:84.29:0,84,2301	1/1:2,23:25:63.22:1219,63,0	1/1:2,20:22:60.21:1162,60,0	1/1:3,18:21:41.73:813,42,0	0/0:15,0:15:42.14:0,42,1137	0/0:24,0:24:72.25:0,72,1932	0/0:25,0:25:75.26:0,75,2035	0/0:18,0:18:54.19:0,54,1424
chr10	63381330	.	T	TG	3493.46	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=6.088;DP=701;FS=4.870;HRun=1;HaplotypeScore=90.9992;InbreedingCoeff=0.9996;MQ=91.90;MQ0=0;MQRankSum=-2.023;QD=39.70;ReadPosRankSum=0.838;VQSLOD=4.0552;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,117,1597	1/1:1,12:13:36.12:568,36,0	0/0:31,0:31:84.24:0,84,1123	0/0:27,0:27:75.21:0,75,988	0/0:27,0:27:81.27:0,81,1126	0/0:26,0:26:75.20:0,75,994	0/0:18,0:18:51.17:0,51,713	1/1:1,21:22:63.19:960,63,0	0/0:25,0:25:72.24:0,72,1007	0/0:25,0:25:75.24:0,75,1032	0/0:23,0:23:69.20:0,69,930	0/0:32,0:32:84.25:0,84,1140	0/0:33,0:33:81.25:0,81,1114	0/0:25,0:25:72.24:0,72,1003	0/0:41,0:41:99:0,120,1641	0/0:24,0:24:72.24:0,72,1004	1/1:1,27:28:66.12:1054,66,0	1/1:0,25:25:57.19:911,57,0	0/0:16,0:16:45.13:0,45,608	0/0:23,0:23:69.23:0,69,961	0/0:40,0:40:99:0,108,1506	0/0:14,0:14:39.13:0,39,544	0/0:20,0:20:57.19:0,57,791	0/0:26,0:26:78.24:0,78,1072	0/0:11,0:11:33.11:0,33,454	0/0:29,0:29:84.27:0,84,1156	0/0:28,0:28:78.22:0,78,1065	0/0:9,0:9:27.04:0,27,339
chr10	63381391	.	T	TG	20178.51	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-15.654;DP=700;FS=2.667;HRun=1;HaplotypeScore=67.5402;InbreedingCoeff=1.0000;MQ=80.04;MQ0=0;MQRankSum=-4.152;QD=40.28;ReadPosRankSum=2.480;VQSLOD=5.6418;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,50:54:99:2041,138,0	0/0:12,0:12:36.12:0,36,467	0/0:15,0:15:42.13:0,42,520	0/0:18,0:18:42.56:0,43,513	1/1:0,15:15:42.14:627,42,0	1/1:3,31:34:87.29:1304,87,0	1/1:1,23:24:60.20:899,60,0	0/0:27,0:27:75.17:0,75,938	0/0:23,0:23:66.21:0,66,856	1/1:1,13:14:39.13:584,39,0	1/1:0,22:22:63.11:914,63,0	1/1:0,33:33:90.30:1349,90,0	1/1:1,24:25:63.21:943,63,0	1/1:0,19:19:54.18:809,54,0	1/1:0,31:31:93.32:1394,93,0	1/1:1,31:32:93.32:1394,93,0	0/0:35,0:35:96.29:0,96,1218	0/0:24,0:24:57.18:0,57,739	1/1:2,22:24:66.19:946,66,0	1/1:0,22:22:60.16:868,60,0	1/1:0,30:30:72.24:1079,72,0	1/1:0,20:20:51.17:761,51,0	1/1:1,23:24:66.22:988,66,0	1/1:2,17:19:48.16:719,48,0	1/1:0,28:28:81.27:1212,81,0	0/0:28,0:28:84.25:0,84,1065	1/1:0,31:31:90.30:1348,90,0	0/0:17,0:17:51.17:0,51,662
chr10	63382067	.	TTTTTG	T	7938.68	PASS	AB=0.771;AC=26;AF=0.464;AN=56;BaseQRankSum=12.847;DP=544;FS=0.000;HRun=0;HaplotypeScore=101.6924;InbreedingCoeff=0.8600;MQ=63.19;MQ0=3;MQRankSum=-4.971;QD=30.89;ReadPosRankSum=-0.157;VQSLOD=4.5345;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,120,3081	0/0:6,0:6:12.92:0,13,351	0/1:19,0:12:4.64:5,0,286	0/0:24,0:21:48.22:0,48,835	0/0:23,0:23:63.20:0,63,1697	1/1:0,15:15:18.06:357,18,0	1/1:2,17:18:39.13:769,39,0	0/0:25,0:25:59.21:0,59,1315	0/0:16,0:16:45.15:0,45,1238	1/1:1,24:22:60.20:1061,60,0	1/1:0,22:21:48.11:794,48,0	1/1:4,19:22:39.13:787,39,0	0/0:13,0:13:39.13:0,39,1083	1/1:0,10:10:11.79:245,12,0	1/1:2,16:18:27.09:550,27,0	0/1:2,11:13:74.98:230,0,75	0/0:26,0:26:78.26:0,78,2161	0/0:22,0:22:57.19:0,57,1320	1/1:3,21:22:60.16:1042,60,0	1/1:2,17:19:42.11:716,42,0	1/1:2,7:9:11.91:190,12,0	0/0:17,0:17:51.15:0,51,1247	0/0:13,0:13:36.12:0,36,949	0/0:25,0:25:63.21:0,63,1727	1/1:3,17:19:24.08:461,24,0	0/0:26,0:26:39.81:0,40,1490	1/1:0,21:21:35.44:734,35,0	0/0:9,0:9:21:0,21,558
chr10	63382388	.	C	CTT	10128.70	PASS	AB=0.776;AC=32;AF=0.571;AN=56;BaseQRankSum=-4.242;DP=745;FS=19.555;HRun=1;HaplotypeScore=69.7905;InbreedingCoeff=0.5355;MQ=47.25;MQ0=27;MQRankSum=-11.534;QD=18.45;ReadPosRankSum=-0.340;VQSLOD=0.8686;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:78.25:0,78,1171	0/0:5,0:5:15.05:0,15,230	0/0:26,0:23:63.17:0,63,922	0/0:19,0:15:38.07:0,38,505	0/0:28,0:28:81.27:0,81,1237	1/1:2,30:16:27.09:521,27,0	1/1:1,27:14:3.01:58,3,0	0/0:35,0:35:99:0,105,1607	0/1:19,19:31:99:627,0,729	1/1:3,28:18:51.16:952,51,0	1/1:1,21:18:38.99:637,39,0	1/1:6,32:26:63.22:1206,63,0	0/1:28,15:39:99:360,0,1071	1/1:1,30:20:51.13:945,51,0	1/1:4,17:11:30.10:578,30,0	1/1:0,29:17:33.11:636,33,0	0/0:37,0:36:99:0,103,1535	0/0:13,0:12:36.12:0,36,544	1/1:3,9:9:24.07:432,24,0	1/1:1,15:15:26.97:408,27,0	1/1:0,15:15:30.06:540,30,0	0/1:24,7:28:98.30:98,0,935	0/1:16,7:21:99:177,0,589	0/1:19,10:29:99:234,0,776	1/1:5,39:22:42.14:809,42,0	0/1:24,2:26:40.49:40,0,979	1/1:0,33:20:45.14:868,45,0	0/0:7,0:7:18.06:0,18,276
chr10	63383017	.	CA	C	4241.72	PASS	AB=0.770;AC=41;AF=0.732;AN=56;BaseQRankSum=-4.108;DP=514;FS=7.193;HRun=12;HaplotypeScore=81.5603;InbreedingCoeff=0.2360;MQ=64.89;MQ0=5;MQRankSum=0.518;QD=9.71;ReadPosRankSum=7.076;VQSLOD=3.6698;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,24:29:19.18:323,19,0	0/1:5,0:5:15.04:15,0,18	0/0:33,0:8:11.46:0,11,83	0/0:29,0:10:18.72:0,19,120	1/1:1,5:7:7.98:52,8,0	1/1:2,32:35:59.07:438,59,0	1/1:8,25:33:14.68:307,15,0	0/1:16,0:16:2.13:153,0,2	1/1:14,7:21:24.56:203,25,0	1/1:7,21:28:56.70:437,57,0	1/1:7,6:13:17.89:137,18,0	1/1:4,15:19:28.39:230,28,0	0/1:11,13:25:99:266,0,122	1/1:4,9:14:25.91:190,26,0	1/1:4,3:7:8.92:70,9,0	0/1:7,18:25:1.75:153,0,2	1/1:14,0:14:25.65:149,26,0	1/1:20,1:21:42:269,42,0	1/1:12,1:12:12.75:90,13,0	0/0:5,0:5:0:0,0,0	0/0:3,4:7:2.80:0,3,13	0/1:15,6:22:78.27:78,0,122	0/1:10,9:18:56.13:130,0,56	0/1:12,7:19:99:115,0,220	1/1:11,9:20:3.63:101,4,0	1/1:21,2:22:33.11:246,33,0	1/1:3,2:5:8.90:66,9,0	1/1:4,0:4:5.33:26,5,0
chr10	63383030	.	T	TG	2098.96	PASS	AB=0.946;AC=22;AF=0.393;AN=56;BaseQRankSum=-3.169;DP=571;FS=22.674;HRun=9;HaplotypeScore=93.9873;InbreedingCoeff=0.2109;MQ=64.79;MQ0=4;MQRankSum=-1.166;QD=6.40;ReadPosRankSum=-3.054;VQSLOD=-0.3661;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:50.99:0,51,437	1/1:8,0:8:17.95:147,18,0	0/0:42,1:16:15.71:0,16,175	0/1:33,1:13:20.91:21,0,65	0/0:10,0:10:21:0,21,181	0/1:37,0:37:29.61:30,0,276	0/1:32,0:32:47.56:48,0,275	1/1:18,2:20:24.33:226,24,0	0/1:23,0:24:56.47:56,0,214	0/0:26,0:26:49.84:0,50,424	0/0:20,0:20:46.26:0,46,396	0/0:24,0:24:35.52:0,36,312	0/1:26,2:28:59.22:59,0,327	0/0:20,0:20:38.46:0,38,316	0/0:7,0:7:0.25:0,0,51	0/0:28,0:28:8.96:0,9,218	1/1:15,1:16:42:395,42,0	1/1:21,0:21:31.21:486,31,0	0/1:14,0:11:12.35:16,0,12	0/1:5,0:5:0.83:1,0,11	0/0:9,0:9:8.05:0,8,37	0/1:17,2:19:57.95:58,0,196	0/1:14,3:17:99:122,0,143	0/1:17,4:21:99:148,0,203	0/0:20,0:20:20.31:0,20,235	1/1:26,2:27:5.54:381,6,0	0/0:8,0:8:13.25:0,13,63	1/1:4,0:4:11.58:89,12,0
chr10	63383276	.	AC	A	1058.03	PASS	AB=0.721;AC=11;AF=0.229;AN=48;BaseQRankSum=8.193;DP=251;FS=27.717;HRun=2;HaplotypeScore=54.2511;InbreedingCoeff=-0.3287;MQ=81.07;MQ0=1;MQRankSum=-6.399;QD=8.02;ReadPosRankSum=1.448;VQSLOD=-0.6152;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:10:23.72:0,24,291	0/0:4,0:4:9.01:0,9,97	0/0:23,0:12:17.44:0,17,316	0/0:18,0:15:38.12:0,38,415	0/0:2,0:2:6.01:0,6,68	0/1:12,6:17:99:143,0,294	0/1:23,13:34:99:194,0,573	0/0:5,0:5:12.04:0,12,176	0/1:6,2:8:47.56:48,0,151	0/1:7,2:9:40.29:40,0,154	./.	0/1:4,3:7:72.93:73,0,87	0/1:8,7:14:99:116,0,191	0/1:6,10:16:38.23:280,0,38	0/0:5,0:5:9.03:0,9,122	0/1:6,3:9:99:100,0,119	0/0:16,0:16:38.97:0,39,573	0/0:8,0:8:24.08:0,24,340	0/0:3,0:3:9.03:0,9,132	./.	0/0:7,0:7:13.73:0,14,195	0/1:2,2:4:34.65:63,0,35	./.	0/0:7,2:9:15.03:0,15,184	0/1:2,3:5:29.10:114,0,29	0/1:3,1:4:25.71:26,0,31	0/0:2,0:2:6:0,6,67	./.
chr10	63383307	.	GTAATGTGGCTC	G	5670.11	PASS	AB=0.754;AC=13;AF=0.232;AN=56;BaseQRankSum=11.755;DP=412;FS=46.814;HRun=0;HaplotypeScore=135.2745;InbreedingCoeff=-0.3238;MQ=71.05;MQ0=11;MQRankSum=-10.609;QD=24.76;ReadPosRankSum=3.082;VQSLOD=2.4387;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:48.16:0,48,2501	0/0:4,0:4:9.03:0,9,519	0/0:12,0:12:24.60:0,25,1162	0/0:17,0:16:36.12:0,36,1595	0/0:5,0:5:15.05:0,15,865	0/1:12,8:17:99:489,0,1370	0/1:20,15:32:99:610,0,2681	0/0:20,0:16:48.16:0,48,2709	0/1:15,6:20:99:484,0,1941	0/1:16,2:17:99:198,0,1745	0/1:3,5:7:97.94:98,0,337	0/1:10,6:15:99:600,0,1197	0/1:15,7:22:99:689,0,2055	0/1:18,12:29:99:1127,0,2073	0/0:9,0:9:21.07:0,21,1186	0/1:10,5:15:99:496,0,1285	0/0:28,0:27:81.28:0,81,4431	0/0:18,0:17:51.18:0,51,2928	0/0:13,0:10:24.08:0,24,1382	0/0:3,0:3:6.02:0,6,346	0/0:14,0:14:42.14:0,42,2301	0/1:7,1:7:88.50:89,0,848	0/1:3,1:3:99:101,0,167	0/1:16,3:17:99:166,0,2356	0/1:4,9:13:99:525,0,546	0/0:8,0:8:21.07:0,21,1210	0/0:11,0:11:30.10:0,30,1712	0/0:1,0:1:3.01:0,3,173
chr10	63384355	.	TTTG	T	14919.39	PASS	AB=0.738;AC=41;AF=0.732;AN=56;BaseQRankSum=8.736;DP=685;FS=2.160;HRun=0;HaplotypeScore=108.2469;InbreedingCoeff=0.5532;MQ=56.15;MQ0=2;MQRankSum=0.693;QD=26.41;ReadPosRankSum=4.318;VQSLOD=5.0669;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:57.20:0,57,1165	1/1:1,6:6:15.05:217,15,0	0/0:39,0:28:28.70:0,29,903	0/1:19,1:19:7.37:7,0,531	0/0:19,0:18:51.13:0,51,972	1/1:4,28:32:69.23:998,69,0	1/1:4,33:37:75.17:1037,75,0	1/1:7,21:28:63.18:858,63,0	1/1:3,28:31:81.23:1139,81,0	1/1:15,33:46:96.31:1372,96,0	1/1:6,24:28:60.11:811,60,0	1/1:6,30:35:84.25:1192,84,0	0/1:16,7:23:99:252,0,559	1/1:1,22:23:66.22:955,66,0	1/1:1,7:8:24.08:347,24,0	1/1:1,22:21:51.17:738,51,0	1/1:6,14:20:39.13:564,39,0	1/1:8,18:25:36.12:521,36,0	1/1:3,9:11:23.92:296,24,0	1/1:4,16:19:45.15:651,45,0	1/1:6,6:12:15.05:217,15,0	0/1:10,10:19:99:356,0,399	0/1:10,13:21:99:420,0,428	0/1:18,18:36:99:498,0,486	1/1:10,24:32:63.21:911,63,0	0/0:31,1:32:34.87:0,35,1438	1/1:1,14:15:39.13:564,39,0	0/0:5,0:5:15.05:0,15,304
chr10	63384425	.	T	TG	3027.33	PASS	AB=1.000;AC=31;AF=0.554;AN=56;BaseQRankSum=-7.263;DP=523;FS=13.300;HRun=1;HaplotypeScore=92.2309;InbreedingCoeff=0.0279;MQ=60.54;MQ0=27;MQRankSum=5.259;QD=7.84;ReadPosRankSum=-2.324;VQSLOD=-0.7507;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:44.51:0,45,323	1/1:3,0:4:9:77,9,0	0/0:41,0:13:7.62:0,8,92	0/0:35,0:12:12.53:0,13,67	0/0:10,0:9:14.47:0,14,108	0/1:20,0:18:99:101,0,124	0/1:21,0:20:93.45:93,0,120	1/1:24,1:25:41.77:359,42,0	0/1:23,0:23:77.29:235,0,77	0/1:28,0:25:99:200,0,175	0/1:13,0:9:31.30:101,0,31	0/1:15,0:13:9.93:10,0,116	0/1:18,0:19:75.78:76,0,170	0/1:13,0:12:78.78:79,0,86	1/1:7,0:6:17.05:116,17,0	0/1:25,0:24:92.55:93,0,184	1/1:16,0:19:26.91:224,27,0	1/1:12,2:16:26.96:237,27,0	1/1:20,0:17:10.12:187,10,0	1/1:10,0:10:26.88:208,27,0	1/1:6,0:5:11.92:88,12,0	0/1:20,0:17:9.62:181,0,10	0/1:28,0:24:99:156,0,152	0/1:22,0:22:79.26:160,0,79	0/1:21,0:20:59.18:59,0,157	0/0:14,0:14:9.17:0,9,248	1/1:10,1:8:20.52:173,21,0	0/0:17,0:14:32.82:0,33,252
chr10	63384753	.	TGCACACACAC	T	12372.10	PASS	AB=0.761;AC=13;AF=0.232;AN=56;BaseQRankSum=15.966;DP=883;FS=5.072;HRun=0;HaplotypeScore=266.5388;InbreedingCoeff=-0.3196;MQ=55.24;MQ0=3;MQRankSum=-16.152;QD=23.61;ReadPosRankSum=3.494;VQSLOD=3.6083;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:87.30:0,87,4213	0/0:9,0:9:21.07:0,21,1057	0/0:18,0:11:7.25:0,7,423	0/0:20,0:14:27.56:0,28,1072	0/0:19,0:19:51.17:0,51,2318	0/1:31,8:38:99:681,0,2635	0/1:32,14:46:99:857,0,2654	0/0:24,0:24:54.18:0,54,2261	0/1:27,10:37:99:816,0,2532	0/1:31,23:53:99:2131,0,2287	0/1:20,7:27:99:235,0,1770	0/1:23,13:36:99:1262,0,2598	0/1:31,16:47:99:1117,0,3343	0/1:34,11:44:99:1053,0,3022	0/0:21,0:21:45.15:0,45,2149	0/1:14,14:28:99:871,0,1600	0/0:30,0:30:84.25:0,84,4018	0/0:30,0:30:75.12:0,75,3642	0/0:20,0:19:42.10:0,42,1754	0/0:27,0:27:75.04:0,75,3324	0/0:23,0:23:57.14:0,57,1947	0/1:27,19:44:99:1593,0,2364	0/1:26,16:42:99:571,0,3024	0/1:37,1:38:48.78:49,0,2975	0/1:19,19:37:99:1138,0,2353	0/0:35,1:36:1.84:0,2,4369	0/0:17,0:17:51.18:0,51,2584	0/0:31,0:31:93.32:0,93,4594
chr10	63384847	.	A	ATT	10923.95	PASS	AB=0.704;AC=36;AF=0.643;AN=56;BaseQRankSum=-4.294;DP=795;FS=1.501;HRun=12;HaplotypeScore=99.1968;InbreedingCoeff=0.8242;MQ=60.97;MQ0=6;MQRankSum=-0.344;QD=18.30;ReadPosRankSum=0.459;VQSLOD=4.2279;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:42:98.46:0,98,879	0/0:6,0:7:20.77:0,21,178	0/0:15,0:13:18.79:0,19,148	0/0:4,0:4:5.99:0,6,53	0/0:16,0:20:29.17:0,29,335	1/1:3,28:37:71.10:871,71,0	1/1:22,9:35:64.69:659,65,0	0/0:36,0:38:77.07:0,77,654	1/1:12,23:52:53.44:684,53,0	1/1:23,13:38:59.49:686,59,0	1/1:4,18:22:56:664,56,0	1/1:6,29:41:47.96:821,48,0	1/1:8,6:25:56.13:448,56,0	1/1:6,34:42:71.45:908,71,0	1/1:1,6:10:25.55:278,26,0	1/1:13,9:26:55.54:593,56,0	0/0:30,0:34:77.11:0,77,662	0/0:22,0:23:50.61:0,51,450	1/1:11,11:20:33:411,33,0	1/1:3,14:18:36.02:446,36,0	1/1:3,9:12:15.05:210,15,0	1/1:11,8:32:68.95:557,69,0	1/1:13,5:34:41.28:452,41,0	0/1:4,15:29:21.08:470,0,21	1/1:29,22:52:88.27:1279,88,0	0/1:21,2:27:33.94:34,0,424	1/1:8,24:33:34.35:453,34,0	0/0:12,0:13:29.70:0,30,256
chr10	63385486	.	GT	G	4957.66	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=3.767;DP=593;FS=1.998;HRun=10;HaplotypeScore=87.2447;InbreedingCoeff=0.9809;MQ=70.34;MQ0=0;MQRankSum=2.410;QD=18.23;ReadPosRankSum=3.559;VQSLOD=5.5414;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:43:71.46:0,71,378	0/0:8,0:8:24.06:0,24,259	0/0:15,0:13:12.18:0,12,159	0/0:16,0:13:23.93:0,24,241	0/0:4,0:25:49.47:0,49,271	1/1:1,18:19:44.99:391,45,0	1/1:4,26:30:35.80:539,36,0	0/0:46,0:46:99:0,105,1092	0/0:4,0:8:14.34:0,14,78	1/1:10,21:31:59.93:515,60,0	1/1:2,7:10:25.32:201,25,0	1/1:2,17:19:41.99:365,42,0	0/0:3,0:15:28.57:0,29,154	1/1:4,7:11:7.23:187,7,0	1/1:4,22:26:44.99:391,45,0	1/1:1,19:20:47.98:417,48,0	0/0:31,0:31:87.20:0,87,944	0/0:25,0:26:74.92:0,75,776	1/1:4,18:22:53.97:469,54,0	1/1:2,14:16:38.99:338,39,0	1/1:4,16:20:41.97:365,42,0	0/0:2,0:16:39.91:0,40,234	0/0:3,0:11:28.82:0,29,164	0/0:6,0:21:46.97:0,47,241	1/1:0,18:18:38.99:339,39,0	0/0:22,0:22:57.14:0,57,619	1/1:5,25:30:50.68:442,51,0	0/0:15,0:16:47.93:0,48,492
chr10	63385704	.	TGATGGATGGATGGATG	T	11686.05	PASS	AB=0.770;AC=40;AF=0.741;AN=54;BaseQRankSum=2.858;DP=646;FS=0.775;HRun=0;HaplotypeScore=279.8316;InbreedingCoeff=0.3347;MQ=73.02;MQ0=14;MQRankSum=-4.720;QD=22.65;ReadPosRankSum=-0.177;VQSLOD=3.0888;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:19,11:30:14.51:625,15,0	0/1:4,0:8:27.26:83,0,27	0/0:34,0:23:3.01:0,3,82	0/0:36,0:28:9.01:0,9,130	1/1:10,8:18:3.48:132,3,0	0/1:12,10:22:17.24:1260,0,17	0/1:21,9:30:65.15:248,0,65	./.	1/1:9,0:15:12.03:126,12,0	1/1:17,5:22:15.05:572,15,0	1/1:16,12:28:12.04:508,12,0	1/1:13,18:31:36.12:1558,36,0	1/1:11,5:17:15.05:635,15,0	1/1:10,7:17:9.03:376,9,0	1/1:12,9:21:24.08:1033,24,0	1/1:11,6:17:18.06:768,18,0	0/1:20,0:26:99:102,0,123	0/1:16,0:20:35.24:52,0,35	1/1:19,5:21:15:437,15,0	1/1:15,8:23:15.05:622,15,0	0/1:33,6:38:0:0,0,0	1/1:17,5:22:6.02:252,6,0	1/1:15,4:18:3.01:130,3,0	1/1:9,7:16:9.03:393,9,0	1/1:12,14:25:24.08:1026,24,0	0/0:21,0:30:36.12:0,36,1507	1/1:17,7:24:18.06:747,18,0	0/0:5,0:11:15.05:0,15,610
chr10	63387901	.	A	AT	7132.58	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-14.434;DP=608;FS=4.688;HRun=11;HaplotypeScore=102.4943;InbreedingCoeff=0.9422;MQ=75.20;MQ0=0;MQRankSum=-3.246;QD=20.38;ReadPosRankSum=-3.408;VQSLOD=3.7095;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:61.10:0,61,177	1/1:2,6:9:1.30:174,1,0	0/0:19,0:18:14.78:0,15,115	0/0:15,0:14:6.65:0,7,91	0/0:36,0:37:61.84:0,62,184	1/1:3,16:19:42.08:425,42,0	1/1:3,18:21:48.07:478,48,0	1/1:5,19:24:36.83:539,37,0	0/0:16,0:16:20.08:0,20,49	1/1:6,17:24:54.41:531,54,0	1/1:10,10:20:24.17:301,24,0	1/1:1,11:12:21.04:212,21,0	0/0:23,0:23:26.43:0,26,65	1/1:6,12:18:34.61:403,35,0	1/1:4,10:14:30.04:297,30,0	1/1:4,14:18:29.44:381,29,0	1/1:8,30:38:37.61:731,38,0	1/1:2,18:21:41.92:410,42,0	1/1:9,13:23:32.06:385,32,0	1/1:4,29:33:72:690,72,0	1/1:0,11:11:30.06:304,30,0	0/0:19,0:19:24.86:0,25,63	0/0:24,0:24:26.23:0,26,77	0/0:14,0:14:17.09:0,17,43	1/1:7,18:26:40.60:461,41,0	0/0:29,0:30:11.13:0,11,66	1/1:2,16:19:41.92:409,42,0	0/0:19,0:19:18.65:0,19,46
chr10	63387911	.	TTA	T	3660.47	PASS	AB=1.000;AC=31;AF=0.554;AN=56;BaseQRankSum=-5.808;DP=602;FS=3.209;HRun=0;HaplotypeScore=125.3851;InbreedingCoeff=0.2594;MQ=69.91;MQ0=0;MQRankSum=0.446;QD=8.40;ReadPosRankSum=3.820;VQSLOD=3.2475;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,39:40:90.28:1234,90,0	0/0:10,0:10:30.08:0,30,366	0/0:15,0:13:23.91:0,24,369	0/1:17,0:14:0.30:0,0,204	1/1:1,33:34:86.08:1265,86,0	0/1:17,0:17:11.20:14,0,11	0/1:22,0:22:15.78:16,0,27	0/0:25,0:26:78.22:0,78,944	1/1:14,0:14:23.07:64,23,0	0/1:28,0:28:61.45:142,0,61	0/1:19,0:19:32.56:33,0,72	0/1:15,0:15:14.28:62,0,14	1/1:23,0:23:30.89:85,31,0	0/1:17,0:17:5.26:5,0,78	0/1:15,0:15:51.12:54,0,51	0/1:17,0:17:12.81:13,0,49	0/0:39,0:39:99:0,102,1252	0/0:22,0:22:51.12:0,51,597	0/1:21,0:21:57.72:58,0,72	0/0:32,0:32:31.59:0,32,204	1/1:16,0:16:7.36:111,7,0	1/1:19,0:19:31.99:96,32,0	1/1:24,0:24:12.87:115,13,0	1/1:12,0:12:19.99:54,20,0	0/0:22,0:22:21.85:0,22,93	1/1:28,0:28:29.09:140,29,0	0/1:22,0:22:33.53:40,0,34	1/1:16,0:16:21.80:60,22,0
chr10	63387912	.	TA	T	8400.72	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=3.165;DP=595;FS=1.244;HRun=3;HaplotypeScore=98.4488;InbreedingCoeff=0.9785;MQ=70.35;MQ0=0;MQRankSum=-2.017;QD=18.03;ReadPosRankSum=4.470;VQSLOD=4.6425;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:40,0:39:87.71:514,88,0	0/0:10,0:10:29.92:0,30,252	0/0:16,0:14:8.73:0,9,331	0/0:17,0:14:10.91:0,11,138	1/1:34,0:34:80.56:534,81,0	1/1:17,0:17:41.93:202,42,0	1/1:20,0:20:50.53:257,51,0	0/0:26,0:26:77.85:0,78,665	1/1:1,13:14:42.12:505,42,0	1/1:28,0:28:62.34:392,62,0	1/1:20,0:20:34.31:206,34,0	1/1:15,0:15:27.71:172,28,0	1/1:0,23:23:51.16:629,51,0	1/1:18,0:18:32.85:195,33,0	1/1:15,0:15:32.57:188,33,0	1/1:16,1:17:28.12:195,28,0	0/0:39,0:39:99:0,102,842	0/0:21,0:21:50.83:0,51,401	1/1:18,1:19:34.49:256,34,0	1/1:29,0:29:56.90:253,57,0	1/1:16,0:16:43.01:253,43,0	1/1:0,19:19:51.07:607,51,0	1/1:5,20:25:65.11:767,65,0	1/1:0,12:12:33.10:406,33,0	1/1:21,0:21:42.49:201,42,0	1/1:1,26:27:81.05:946,81,0	1/1:21,0:21:53.22:280,53,0	1/1:0,16:16:36.11:444,36,0
chr10	63388232	.	TCAGTGACGGA	T	22107.98	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=20.190;DP=765;FS=1.218;HRun=0;HaplotypeScore=282.7060;InbreedingCoeff=0.9989;MQ=80.37;MQ0=0;MQRankSum=-20.969;QD=65.41;ReadPosRankSum=-0.955;VQSLOD=4.0851;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:58:99:0,172,8900	0/0:10,0:10:30.10:0,30,1591	0/0:26,0:26:30.14:0,30,2925	0/0:32,0:32:77.60:0,78,3770	0/0:41,0:41:99:0,123,6134	1/1:1,19:20:57.08:1604,57,0	1/1:1,27:28:66.03:1884,66,0	0/0:20,0:20:54.18:0,54,2469	0/0:39,0:39:99:0,114,5970	1/1:4,30:34:87.24:2678,87,0	1/1:0,14:14:20.94:484,21,0	1/1:0,37:37:96.26:3103,96,0	0/0:28,0:28:84.27:0,84,4216	1/1:2,29:31:81.08:2438,81,0	1/1:0,32:32:80.92:2212,81,0	1/1:5,33:38:96:2783,96,0	0/0:29,0:29:84.29:0,84,4296	0/0:30,0:30:84.27:0,84,4159	1/1:0,15:15:44.97:1030,45,0	1/1:0,18:18:38.92:855,39,0	1/1:2,35:37:71.50:977,71,0	0/0:27,0:27:81.28:0,81,3975	0/0:13,0:13:30.09:0,30,1464	0/0:38,0:38:99:0,114,5990	1/1:0,12:12:32.98:727,33,0	0/0:28,0:28:78.27:0,78,4154	1/1:1,21:22:50.98:1333,51,0	0/0:8,0:8:24.08:0,24,1220
chr10	63388844	.	CG	C	16739.89	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=7.503;DP=641;FS=0.000;HRun=4;HaplotypeScore=96.0848;InbreedingCoeff=0.9989;MQ=88.04;MQ0=1;MQRankSum=-7.068;QD=32.38;ReadPosRankSum=5.154;VQSLOD=4.7445;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,40:46:99:1438,120,0	0/0:7,0:7:21.07:0,21,293	0/0:26,0:26:74.23:0,74,915	0/0:22,0:21:52.43:0,52,760	1/1:2,21:23:60.07:684,60,0	1/1:0,22:22:57.17:683,57,0	1/1:1,21:22:57.17:683,57,0	0/0:17,0:17:48.15:0,48,648	1/1:0,19:19:57.16:671,57,0	1/1:2,19:21:57.17:684,57,0	1/1:1,15:16:42.13:502,42,0	1/1:2,27:29:78.24:933,78,0	1/1:1,22:23:66.16:774,66,0	1/1:1,25:26:75.23:897,75,0	1/1:0,17:17:51.16:611,51,0	1/1:0,20:20:54.17:647,54,0	0/0:29,0:29:84.19:0,84,1098	0/0:23,0:23:69.23:0,69,959	1/1:0,20:20:60.18:716,60,0	1/1:1,18:19:51.16:612,51,0	1/1:2,43:45:99:1366,114,0	1/1:2,22:23:66.20:786,66,0	1/1:3,22:22:66.20:786,66,0	1/1:3,25:28:81.25:971,81,0	1/1:2,15:17:42.13:503,42,0	1/1:2,27:29:84.26:1001,84,0	1/1:2,15:17:39.12:467,39,0	1/1:0,9:9:27.08:324,27,0
chr10	63388847	.	G	GT	2108.17	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=16.084;DP=641;FS=10.514;HRun=0;HaplotypeScore=148.9881;InbreedingCoeff=0.9082;MQ=89.83;MQ0=1;MQRankSum=-3.720;QD=8.57;ReadPosRankSum=4.409;VQSLOD=3.4969;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:42,2:44:90.80:451,91,0	0/0:7,0:7:21.07:0,21,294	0/0:26,0:27:78.04:0,78,1020	0/0:25,0:24:63.12:0,63,798	1/1:26,0:26:8.60:152,9,0	0/0:22,0:22:25.86:0,26,85	0/0:21,0:21:34.52:0,35,99	0/0:16,0:16:48.15:0,48,640	1/1:20,0:20:32.37:231,32,0	0/0:19,0:19:26.69:0,27,86	0/0:15,0:15:25.66:0,26,75	0/0:28,0:28:50.42:0,50,163	1/1:23,0:23:28.69:196,29,0	0/0:27,0:27:45.83:0,46,133	0/1:17,0:17:39.33:48,0,39	0/0:22,0:22:35.71:0,36,121	0/0:28,0:28:84.24:0,84,1117	0/0:23,0:23:69.23:0,69,958	0/0:20,0:20:36.70:0,37,107	0/0:19,0:19:33.89:0,34,116	0/0:44,0:44:26.96:0,27,165	1/1:23,1:23:56.63:256,57,0	1/1:24,2:23:51.22:220,51,0	1/1:26,2:29:55.02:309,55,0	0/0:15,0:15:25.66:0,26,74	1/1:27,0:28:76.17:360,76,0	0/0:17,0:17:27.80:0,28,115	1/1:9,0:9:24.02:99,24,0
chr10	63391037	.	AGGGGTG	A	1171.48	PASS	AC=16;AF=0.348;AN=46;BaseQRankSum=-2.281;DP=203;FS=0.000;HRun=0;HaplotypeScore=48.9621;InbreedingCoeff=0.7024;MQ=92.86;MQ0=2;MQRankSum=-3.456;QD=23.91;ReadPosRankSum=0.945;VQSLOD=2.6601;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:9:16.48:0,16,151	./.	0/0:17,0:12:24.99:0,25,349	0/0:18,0:15:29.58:0,30,329	./.	1/1:4,0:5:5.21:115,5,0	1/1:18,2:21:34.97:514,35,0	0/0:7,0:7:6.01:0,6,148	0/0:7,0:7:14.97:0,15,167	./.	0/0:3,0:3:0:0,0,0	1/1:4,2:6:12:226,12,0	0/0:7,0:7:15.05:0,15,274	1/1:1,0:1:3:25,3,0	1/1:2,2:4:9.03:190,9,0	1/1:2,0:3:8.86:134,9,0	0/0:29,0:29:26.75:0,27,378	0/0:14,0:14:20.60:0,21,335	0/0:2,0:2:2.99:0,3,23	./.	1/1:6,0:6:8.99:74,9,0	0/0:6,0:6:5.61:0,6,81	0/0:1,0:1:0.47:0,0,1	0/0:11,0:11:20.61:0,21,235	./.	0/0:4,0:4:9:0,9,109	1/1:2,0:3:3.01:52,3,0	0/0:3,0:3:3:0,3,43
chr10	63391040	.	GGT	G	1137.19	PASS	AB=1.000;AC=34;AF=0.630;AN=54;BaseQRankSum=-0.282;DP=194;FS=0.723;HRun=0;HaplotypeScore=36.9681;InbreedingCoeff=0.3602;MQ=94.12;MQ0=2;MQRankSum=-2.146;QD=10.83;ReadPosRankSum=-1.113;VQSLOD=2.9792;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:9:0.84:0,1,92	0/1:1,0:1:0:0,0,0	0/0:17,0:12:0.32:0,0,147	0/0:19,0:16:9.72:0,10,155	./.	1/1:5,0:5:11.08:99,11,0	1/1:19,1:21:49.92:414,50,0	0/0:4,0:4:2.27:0,2,44	0/1:6,0:6:9.77:10,0,36	0/1:4,0:4:0:0,0,0	0/0:1,2:3:0:0,0,0	1/1:6,1:7:14.82:118,15,0	0/1:7,0:7:21.68:22,0,55	1/1:3,0:3:8.96:70,9,0	1/1:5,0:5:11.99:106,12,0	1/1:3,1:4:11.90:97,12,0	0/0:22,0:22:17.76:0,18,152	0/0:12,0:12:14.91:0,15,88	1/1:2,0:2:3:27,3,0	1/1:3,0:3:2.98:21,3,0	1/1:8,0:8:11.98:99,12,0	1/1:6,0:6:5.72:38,6,0	0/1:1,0:1:0:0,0,0	0/1:10,0:10:21.64:75,0,22	1/1:3,0:3:2.99:23,3,0	1/1:4,0:4:7.01:33,7,0	1/1:2,0:2:3:28,3,0	1/1:3,0:3:2.22:7,2,0
chr10	63391041	.	GT	G	1017.28	PASS	AB=0.921;AC=32;AF=0.593;AN=54;BaseQRankSum=-0.597;DP=190;FS=3.674;HRun=1;HaplotypeScore=37.5337;InbreedingCoeff=0.1614;MQ=94.07;MQ0=2;MQRankSum=-1.181;QD=6.74;ReadPosRankSum=-0.966;VQSLOD=0.4104;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:8,1:8:8.73:9,0,73	./.	0/1:15,1:11:23.04:23,0,123	0/0:20,0:16:17.32:0,17,149	0/0:3,0:3:1.55:0,2,4	1/1:5,0:5:11.52:94,12,0	1/1:18,2:20:50.49:380,50,0	0/0:4,0:4:2.08:0,2,26	0/1:6,0:6:15.30:49,0,15	0/1:3,0:3:0:0,0,0	0/0:3,0:3:0:0,0,0	1/1:6,1:7:14.76:101,15,0	0/1:7,0:7:3.61:4,0,71	1/1:3,0:3:8.96:70,9,0	1/1:4,1:5:11.94:89,12,0	1/1:3,1:4:11.86:82,12,0	0/1:11,9:20:14.37:14,0,99	0/1:11,1:12:6.06:28,0,6	1/1:2,0:2:3:27,3,0	1/1:2,1:3:2.98:21,3,0	1/1:8,1:9:14.86:113,15,0	0/1:5,1:6:0.61:3,0,1	0/1:1,0:1:0:0,0,0	0/1:8,1:9:5.83:6,0,42	1/1:2,0:2:2.99:23,3,0	0/0:5,0:5:0.37:0,0,9	1/1:2,0:2:2.98:22,3,0	0/0:4,0:4:2.68:0,3,11
chr10	63391053	.	GGA	G	113.67	PASS	AB=0.857;AC=5;AF=0.096;AN=52;BaseQRankSum=4.525;DP=215;FS=53.542;HRun=0;HaplotypeScore=39.2709;InbreedingCoeff=-0.1312;MQ=78.22;MQ0=2;MQRankSum=-4.142;QD=3.67;ReadPosRankSum=6.449;VQSLOD=0.0117;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:6,1:6:8.98:0,9,73	0/0:3,0:2:6:0,6,51	0/0:15,0:10:26.73:0,27,235	0/0:15,0:10:2.36:0,2,123	0/0:2,0:2:5.03:0,5,31	0/0:9,0:9:21.06:0,21,186	0/0:23,0:23:13.06:0,13,213	0/0:7,0:7:9.03:0,9,124	0/0:6,0:6:18.03:0,18,204	0/0:4,0:4:11.92:0,12,102	./.	0/0:9,0:9:4.78:0,5,63	0/1:4,1:5:13.05:54,0,13	0/0:6,0:6:14.50:0,15,111	0/0:4,0:4:0.73:0,1,22	0/0:8,0:8:12.43:0,12,135	0/0:22,0:22:28.20:0,28,250	0/0:12,0:12:19.55:0,20,160	0/0:6,0:6:12.02:0,12,124	0/0:3,0:3:2.96:0,3,19	0/0:13,0:13:23.99:0,24,217	0/1:2,1:3:16.80:47,0,17	./.	0/1:11,2:13:88.33:88,0,98	0/0:2,0:2:5.96:0,6,45	0/1:4,1:5:16.92:29,0,17	0/0:4,0:4:9.14:0,9,61	0/1:5,0:5:1.32:1,0,19
chr10	63393143	.	A	AAAC	6097.15	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-14.755;DP=750;FS=12.099;HRun=0;HaplotypeScore=105.7801;InbreedingCoeff=0.9967;MQ=65.77;MQ0=0;MQRankSum=-0.092;QD=42.34;ReadPosRankSum=0.629;VQSLOD=6.0789;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,134,1917	1/1:1,7:8:18.06:371,18,0	0/0:28,0:25:53.89:0,54,699	0/0:23,0:23:42.18:0,42,559	0/0:26,0:25:57.04:0,57,725	0/0:20,0:20:54.18:0,54,790	0/0:19,0:19:51.17:0,51,747	1/1:16,29:45:93.29:1766,93,0	0/0:19,0:19:48.14:0,48,667	0/0:27,0:27:60.15:0,60,822	0/0:30,0:30:81.19:0,81,1123	0/0:30,0:30:84.27:0,84,1196	0/0:20,0:20:48.15:0,48,684	0/0:27,0:27:69.19:0,69,922	0/0:43,0:43:99:0,102,1451	0/0:29,0:29:63.15:0,63,831	1/1:4,28:32:72.25:1488,72,0	1/1:6,22:27:51.17:1054,51,0	0/0:20,0:19:48.12:0,48,646	0/0:20,0:20:42.11:0,42,576	0/0:32,0:32:69.22:0,69,992	0/0:27,0:28:66.05:0,66,852	0/0:22,0:22:57.17:0,57,800	0/0:32,0:32:81.01:0,81,1133	0/0:24,0:24:63.21:0,63,922	1/1:5,16:22:51.18:1053,51,0	0/0:32,0:32:87.24:0,87,1199	1/1:2,5:8:18.06:365,18,0
chr10	63393544	.	TAA	T	1996.86	PASS	AB=1.000;AC=17;AF=0.315;AN=54;BaseQRankSum=0.799;DP=386;FS=22.419;HRun=11;HaplotypeScore=79.8626;InbreedingCoeff=0.3778;MQ=71.63;MQ0=2;MQRankSum=-0.015;QD=10.03;ReadPosRankSum=-0.853;VQSLOD=0.1616;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:30:50.27:0,50,185	1/1:1,8:9:21.05:223,21,0	0/0:27,0:11:25.88:0,26,315	0/0:15,0:9:20.23:0,20,154	0/0:3,0:19:31.40:0,31,108	0/1:23,0:23:6.76:7,0,51	0/0:3,0:3:1.99:0,2,11	1/1:9,26:34:75.09:772,75,0	0/0:0,0:1:2.50:0,2,9	1/1:13,0:13:16.56:39,17,0	0/0:11,0:11:7.05:0,7,41	0/1:9,0:9:13.15:30,0,13	0/0:6,0:6:18.05:0,18,256	0/0:7,0:7:4.64:0,5,21	0/1:11,0:11:7.28:34,0,7	0/1:10,0:10:13.27:13,0,23	1/1:3,16:21:20.23:470,20,0	1/1:1,19:20:48.12:511,48,0	0/1:11,0:11:0.24:0,0,4	0/0:12,0:12:2.37:0,2,22	0/0:5,0:5:2.30:0,2,12	./.	0/0:5,0:5:15.05:0,15,231	0/0:3,0:3:9.03:0,9,139	0/1:15,0:15:0.93:1,0,24	0/0:19,0:20:60.20:0,60,885	0/1:22,0:22:19.05:67,0,19	0/0:23,0:23:65.41:0,65,948
chr10	63394623	.	GTA	G	1495.05	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=6.374;DP=299;FS=3.183;HRun=0;HaplotypeScore=45.3514;InbreedingCoeff=0.7685;MQ=69.56;MQ0=4;MQRankSum=-2.826;QD=14.24;ReadPosRankSum=-1.187;VQSLOD=3.0744;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:54.11:0,54,847	1/1:2,2:4:9.03:106,9,0	0/1:23,0:11:2.96:3,0,47	0/0:17,0:9:0.24:0,0,16	0/0:18,0:18:51.09:0,51,754	0/0:9,0:9:15.05:0,15,245	0/0:9,0:9:12.04:0,12,196	1/1:14,6:19:27.03:318,27,0	0/0:2,0:7:15.01:0,15,134	0/0:9,0:9:21.07:0,21,357	0/0:11,0:11:33.09:0,33,506	0/0:4,0:4:12.04:0,12,200	0/0:13,0:13:30.10:0,30,501	0/0:5,0:5:12.03:0,12,178	0/0:4,0:4:12.04:0,12,200	0/0:8,0:8:24.08:0,24,384	1/1:6,4:9:12.03:143,12,0	1/1:9,4:13:7.92:199,8,0	0/0:10,0:9:24.05:0,24,353	0/0:8,0:8:18.03:0,18,245	0/0:8,0:8:21.06:0,21,331	0/0:3,0:3:3.01:0,3,51	0/0:2,0:2:6.02:0,6,98	0/0:7,0:7:15.05:0,15,250	0/0:12,0:12:21.07:0,21,357	1/1:7,7:14:15.11:377,15,0	0/0:8,0:8:21.07:0,21,351	1/1:12,9:21:42.13:523,42,0
chr10	63394648	.	A	ATG	2205.23	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=1.539;DP=246;FS=2.491;HRun=0;HaplotypeScore=43.4342;InbreedingCoeff=0.6972;MQ=57.18;MQ0=6;MQRankSum=-0.891;QD=23.46;ReadPosRankSum=-2.303;VQSLOD=3.0645;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:63.01:0,63,746	1/1:1,2:3:3.01:53,3,0	0/0:19,0:4:8.23:0,8,64	0/1:19,0:6:8.73:9,0,20	0/0:21,0:21:47.69:0,48,591	0/0:3,0:3:9.03:0,9,123	0/0:3,0:3:3.01:0,3,41	1/1:3,19:22:56.91:832,57,0	0/0:5,0:5:12.04:0,12,165	0/0:5,0:5:15.04:0,15,180	0/0:6,0:6:14.90:0,15,189	0/0:3,0:3:9.03:0,9,123	0/0:10,0:10:24.06:0,24,307	0/0:4,0:4:12.04:0,12,163	0/0:3,0:3:9.03:0,9,123	0/0:2,0:2:6.02:0,6,82	1/1:4,4:8:15.05:254,15,0	1/1:7,5:12:23.98:326,24,0	0/0:9,0:8:18.04:0,18,217	0/0:5,0:5:12.04:0,12,164	0/0:9,0:9:21.07:0,21,288	0/0:1,0:1:3.01:0,3,41	0/0:1,0:1:3.01:0,3,41	0/0:4,0:4:12.04:0,12,165	0/0:6,0:6:18.05:0,18,230	1/1:6,4:10:24:344,24,0	0/0:9,0:9:21.01:0,21,250	1/1:12,7:18:33.11:562,33,0
chr10	63394698	.	CAT	C	710.12	PASS	AC=10;AF=0.217;AN=46;BaseQRankSum=4.266;DP=156;FS=9.354;HRun=0;HaplotypeScore=43.1693;InbreedingCoeff=0.5772;MQ=60.76;MQ0=5;MQRankSum=-0.425;QD=15.11;ReadPosRankSum=-2.996;VQSLOD=1.0355;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:40.04:0,40,844	./.	0/0:11,0:2:2:0,2,6	0/0:9,0:2:1.82:0,2,5	0/0:19,0:19:33.11:0,33,592	0/0:1,0:1:3.01:0,3,55	./.	1/1:2,20:21:57.05:575,57,0	0/0:6,0:6:6.02:0,6,102	0/0:2,0:2:6.02:0,6,110	./.	0/0:2,0:2:6.02:0,6,110	0/0:5,0:5:9:0,9,104	0/0:3,0:3:9.03:0,9,164	0/0:1,0:1:3:0,3,25	0/0:1,0:1:3.01:0,3,49	1/1:6,0:6:3.01:35,3,0	1/1:10,0:10:17.93:163,18,0	0/0:9,0:8:18.06:0,18,303	0/0:3,0:3:9.03:0,9,165	0/0:3,0:3:9.03:0,9,165	./.	./.	0/0:2,0:2:6.02:0,6,110	0/0:3,0:3:9.03:0,9,165	1/1:3,0:3:8.86:57,9,0	0/0:3,0:3:9.03:0,9,163	1/1:6,0:6:2.96:19,3,0
chr10	63394706	.	T	TAC	592.47	PASS	AC=8;AF=0.235;AN=34;BaseQRankSum=0.179;DP=147;FS=31.115;HRun=0;HaplotypeScore=45.0994;InbreedingCoeff=0.4342;MQ=61.22;MQ0=5;MQRankSum=3.541;QD=9.56;ReadPosRankSum=0.486;VQSLOD=1.3521;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:23,4:28:21.79:457,22,0	./.	1/1:9,0:2:0.47:1,0,0	./.	1/1:6,13:19:5.09:188,5,0	./.	./.	0/0:21,0:20:5.31:0,5,73	1/1:0,0:6:6:53,6,0	0/0:2,0:2:6:0,6,55	./.	0/0:2,0:2:3:0,3,25	./.	0/0:3,0:3:3:0,3,25	./.	0/0:1,0:1:2.98:0,3,22	0/0:7,0:6:0.47:0,0,1	0/0:8,0:8:5.75:0,6,31	0/0:7,0:6:11.97:0,12,97	0/0:3,0:3:3:0,3,25	0/0:3,0:3:2.99:0,3,24	./.	./.	./.	0/0:3,0:3:8.99:0,9,75	0/0:3,0:3:2.84:0,3,14	0/0:3,0:3:5.99:0,6,48	./.
chr10	63396834	.	GTGGC	G	424.46	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.283;DP=593;FS=0.000;HRun=0;HaplotypeScore=102.3190;InbreedingCoeff=0.9949;MQ=85.99;MQ0=0;MQRankSum=-3.961;QD=35.37;ReadPosRankSum=0.462;VQSLOD=3.6365;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,126,3535	0/0:20,0:20:57.20:0,57,1622	0/0:19,0:19:51.65:0,52,1240	0/0:23,0:23:69.17:0,69,1716	0/0:16,0:16:48.16:0,48,1362	0/0:17,0:17:51.18:0,51,1456	0/0:22,0:22:66.23:0,66,1829	0/0:22,0:22:63.20:0,63,1636	1/1:2,9:12:36.11:519,36,0	0/0:30,0:29:90.31:0,90,2506	0/0:12,0:12:33.11:0,33,937	0/0:24,0:24:72.23:0,72,1987	0/0:23,0:23:69.24:0,69,1989	0/0:21,0:21:63.22:0,63,1784	0/0:22,0:22:66.23:0,66,1887	0/0:12,0:12:36.11:0,36,944	0/0:38,0:38:99:0,114,3263	0/0:23,0:23:69.24:0,69,1999	0/0:16,0:16:48.16:0,48,1328	0/0:12,0:12:32.88:0,33,841	0/0:44,0:44:99:0,126,3611	0/0:15,0:15:42.14:0,42,1181	0/0:13,0:13:33.11:0,33,905	0/0:23,0:23:69.24:0,69,2000	0/0:14,0:14:42.14:0,42,1168	0/0:19,0:19:57.20:0,57,1620	0/0:31,0:31:93.32:0,93,2690	0/0:8,0:7:21.07:0,21,583
chr10	63396840	.	AGAGGG	A	320.61	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.401;DP=592;FS=0.000;HRun=0;HaplotypeScore=117.1970;InbreedingCoeff=0.9565;MQ=85.39;MQ0=0;MQRankSum=-5.261;QD=32.06;ReadPosRankSum=1.293;VQSLOD=3.3427;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,111,3465	0/0:19,0:19:54.18:0,54,1674	0/0:20,0:20:52.40:0,52,1359	0/0:25,0:25:46.71:0,47,1842	0/0:20,0:20:54.19:0,54,1701	0/0:18,0:18:54.19:0,54,1737	0/0:22,0:22:63.20:0,63,1963	0/0:22,0:22:66.22:0,66,1993	1/1:1,9:10:13.40:408,13,0	0/0:33,0:32:96.33:0,96,3007	0/0:12,0:12:24.08:0,24,727	0/0:21,0:21:63.22:0,63,2035	0/0:22,0:22:63.22:0,63,2034	0/0:20,0:20:60.21:0,60,1939	0/0:24,0:24:72.25:0,72,2325	0/0:12,0:12:36.11:0,36,1063	0/0:39,0:39:99:0,114,3673	0/0:23,0:23:69.24:0,69,2230	0/0:18,0:18:54.19:0,54,1718	0/0:9,0:9:23.93:0,24,750	0/0:43,0:43:99:0,126,4027	0/0:14,0:14:33.10:0,33,994	0/0:12,0:12:30.10:0,30,921	0/0:24,0:24:69.24:0,69,2032	0/0:13,0:13:39.13:0,39,1219	0/0:16,0:16:48.16:0,48,1553	0/0:32,0:32:93.28:0,93,2887	0/0:6,0:5:15.05:0,15,484
chr10	63396848	.	TG	T	33.35	PASS	AB=0.526;AC=1;AF=0.018;AN=56;BaseQRankSum=5.662;DP=587;FS=1.149;HRun=1;HaplotypeScore=69.6031;InbreedingCoeff=0.0185;MQ=82.12;MQ0=0;MQRankSum=-4.472;QD=3.34;ReadPosRankSum=1.558;VQSLOD=0.1624;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,108,1701	0/0:18,0:18:51.17:0,51,799	0/0:20,0:20:42.23:0,42,658	0/0:20,1:21:36.17:0,36,811	0/0:20,0:20:57.19:0,57,911	0/0:20,0:20:57.19:0,57,911	0/0:24,0:24:72.19:0,72,1079	0/0:21,0:21:63.21:0,63,1006	0/1:1,9:10:16.98:108,0,17	0/0:33,0:33:99:0,99,1522	0/0:9,0:9:21.07:0,21,336	0/0:23,0:23:69.24:0,69,1103	0/0:21,0:21:63.21:0,63,1007	0/0:21,0:21:63.21:0,63,1004	0/0:24,0:24:72.25:0,72,1150	0/0:11,0:11:33.11:0,33,528	0/0:40,0:40:99:0,120,1895	0/0:26,0:26:78.22:0,78,1219	0/0:19,0:19:54.17:0,54,822	0/0:11,0:11:27.09:0,27,431	0/0:45,0:45:99:0,129,1989	0/0:13,0:13:33.11:0,33,524	0/0:14,0:14:36.12:0,36,569	0/0:22,0:22:66.21:0,66,1032	0/0:12,0:12:36.11:0,36,552	0/0:16,0:16:48.16:0,48,768	0/0:30,0:30:90.31:0,90,1437	0/0:6,0:5:15.05:0,15,237
chr10	63396851	.	ATG	A	151.28	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.127;DP=571;FS=0.000;HRun=0;HaplotypeScore=78.8420;InbreedingCoeff=0.9767;MQ=80.73;MQ0=0;MQRankSum=-4.979;QD=13.75;ReadPosRankSum=2.497;VQSLOD=3.5242;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,105,1966	0/0:18,0:18:48.16:0,48,896	0/0:18,0:18:40.93:0,41,637	0/0:20,0:20:51.16:0,51,842	0/0:20,0:20:57.20:0,57,1055	0/0:20,0:20:57.20:0,57,1067	0/0:22,0:22:60.21:0,60,1124	0/0:21,0:21:57.19:0,57,1039	1/1:2,9:11:24.81:245,25,0	0/0:30,0:30:90.31:0,90,1669	0/0:8,0:8:21.07:0,21,393	0/0:24,0:24:72.25:0,72,1348	0/0:21,0:21:63.22:0,63,1180	0/0:20,0:20:57.18:0,57,1035	0/0:24,0:24:66.23:0,66,1222	0/0:11,0:11:33.11:0,33,618	0/0:37,0:37:99:0,105,1945	0/0:26,0:26:78.27:0,78,1461	0/0:18,0:18:48.16:0,48,899	0/0:10,0:10:26.81:0,27,505	0/0:45,0:45:99:0,129,2385	0/0:13,0:13:30.10:0,30,549	0/0:13,0:13:36.12:0,36,664	0/0:21,0:21:63.22:0,63,1176	0/0:11,0:11:33.11:0,33,604	0/0:15,0:15:39.13:0,39,725	0/0:31,0:31:90.31:0,90,1662	0/0:6,0:5:15.05:0,15,281
chr10	63397217	.	TTTTTTTGTTTG	T	1578.93	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=-2.958;DP=492;FS=10.717;HRun=0;HaplotypeScore=177.0343;InbreedingCoeff=0.6963;MQ=45.89;MQ0=6;MQRankSum=-5.146;QD=21.05;ReadPosRankSum=-1.780;VQSLOD=1.7033;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:46:98.03:0,98,2212	1/1:8,1:9:2.01:281,2,0	0/0:40,0:9:24.50:0,24,399	0/0:12,0:2:3.01:0,3,57	0/0:22,0:22:38.57:0,39,1075	0/0:18,0:18:41.67:0,42,432	0/0:18,0:18:31.98:0,32,360	1/1:15,6:19:28.50:656,29,0	0/0:13,0:13:30.08:0,30,511	0/0:23,0:23:59.34:0,59,781	0/0:14,0:13:28.99:0,29,369	0/0:11,0:11:31.97:0,32,396	0/0:14,0:14:30.05:0,30,450	0/0:12,0:12:12.71:0,13,267	0/0:18,0:18:45.69:0,46,501	0/0:17,0:17:32.20:0,32,367	1/1:15,2:17:41.57:640,42,0	1/1:6,8:13:2.22:87,2,0	0/0:27,0:26:40.92:0,41,769	0/0:10,0:10:19.56:0,20,323	0/0:11,0:11:11.72:0,12,180	0/0:12,0:12:33.09:0,33,493	0/0:13,0:13:29.99:0,30,366	0/0:22,0:22:35.97:0,36,501	0/0:11,0:11:32.86:0,33,408	0/1:14,0:13:60.47:60,0,128	0/0:17,0:18:40.14:0,40,361	0/0:14,0:12:28.46:0,28,368
chr10	63397220	.	T	TGG	74.34	PASS	AB=0.893;AC=3;AF=0.054;AN=56;BaseQRankSum=0.994;DP=490;FS=36.738;HRun=0;HaplotypeScore=120.4463;InbreedingCoeff=-0.0607;MQ=45.58;MQ0=6;MQRankSum=-1.953;QD=1.65;ReadPosRankSum=-1.505;VQSLOD=0.6518;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:44:97.19:0,97,854	0/1:9,0:9:5.61:6,0,134	0/0:39,0:9:23.50:0,23,276	0/0:13,0:2:2.98:0,3,21	0/0:21,0:21:53.54:0,54,542	0/0:18,0:18:44.88:0,45,390	0/0:22,0:22:36.36:0,36,329	0/1:19,1:18:70.34:70,0,152	0/0:14,0:14:32.92:0,33,297	0/0:24,0:24:53.98:0,54,496	0/0:14,0:13:29.88:0,30,268	0/0:14,0:14:36.23:0,36,349	0/0:13,0:13:26.60:0,27,219	0/0:12,0:12:26.42:0,26,250	0/0:18,0:18:45.66:0,46,400	0/0:17,0:17:31.21:0,31,298	0/1:10,6:16:91.44:91,0,153	0/0:9,0:8:2.96:0,3,20	0/0:28,0:27:40.23:0,40,528	0/0:11,0:11:23.06:0,23,245	0/0:12,0:12:14.51:0,15,130	0/0:12,0:12:32.94:0,33,297	0/0:12,0:12:22.96:0,23,228	0/0:21,0:21:38.94:0,39,383	0/0:11,0:11:27.90:0,28,249	0/0:13,0:12:21.02:0,21,244	0/0:17,0:17:32.48:0,32,293	0/0:15,0:13:32.97:0,33,362
chr10	63397222	.	TTGTTTG	T	2649.40	PASS	AB=0.988;AC=29;AF=0.518;AN=56;BaseQRankSum=11.771;DP=497;FS=18.651;HRun=0;HaplotypeScore=133.4036;InbreedingCoeff=-0.2791;MQ=46.05;MQ0=8;MQRankSum=-11.408;QD=7.18;ReadPosRankSum=8.558;VQSLOD=0.3559;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:67.59:0,68,972	1/1:9,0:9:11.61:236,12,0	0/0:37,0:8:13.34:0,13,151	0/0:14,0:2:2.99:0,3,23	0/0:21,0:21:26.52:0,27,693	0/1:20,0:20:73.70:74,0,220	0/1:22,0:22:36.96:37,0,150	1/1:18,0:16:33.74:480,34,0	0/1:13,0:13:59.46:59,0,186	0/1:24,0:24:42.77:43,0,260	0/1:15,0:14:54.31:54,0,112	0/1:13,1:14:91.27:91,0,281	0/1:13,1:14:99:158,0,102	0/1:13,0:13:99:119,0,152	0/1:18,0:18:64.86:65,0,135	0/1:17,0:17:26.53:27,0,191	1/1:15,0:15:12.85:351,13,0	1/1:9,0:8:2.63:47,3,0	0/1:29,0:28:36.68:37,0,323	0/1:12,0:12:35.73:36,0,265	0/0:12,0:12:16.68:0,17,198	0/1:14,0:14:90.15:90,0,148	0/1:11,1:12:62.54:170,0,63	0/1:22,0:22:82.61:83,0,197	0/1:11,0:11:43.34:43,0,60	1/1:13,0:12:18.82:212,19,0	0/1:20,0:20:63.03:63,0,227	1/1:14,1:13:19.58:250,20,0
chr10	63397846	.	A	AAG	1253.69	PASS	AB=0.984;AC=19;AF=0.339;AN=56;BaseQRankSum=-1.067;DP=479;FS=4.552;HRun=0;HaplotypeScore=71.1350;InbreedingCoeff=-0.4478;MQ=36.14;MQ0=68;MQRankSum=3.626;QD=3.79;ReadPosRankSum=3.381;VQSLOD=1.3090;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:12:25.34:0,25,134	0/1:9,0:8:4.67:5,0,69	0/0:13,0:2:5.95:0,6,54	0/0:14,0:3:4.58:0,5,20	0/0:19,0:12:22.42:0,22,123	0/1:17,0:16:17.46:47,0,17	0/1:17,0:16:32.18:138,0,32	0/1:21,0:16:67.31:67,0,117	0/0:15,0:11:17.12:0,17,107	0/1:20,0:17:27.84:75,0,28	0/1:12,0:11:15.26:73,0,15	0/1:15,0:13:38.80:145,0,39	0/0:15,0:13:20.52:0,21,146	0/1:23,0:18:41.52:82,0,42	0/1:20,0:17:51.33:109,0,51	0/1:11,9:16:23.97:24,0,60	0/1:30,0:22:11.36:11,0,62	0/1:16,0:10:20.42:29,0,20	0/1:21,0:18:79.65:117,0,80	0/1:9,0:8:9.72:10,0,51	0/1:10,0:7:6.46:42,0,6	0/0:11,0:9:10.75:0,11,73	0/0:23,0:20:35.76:0,36,239	0/0:20,0:16:10.63:0,11,83	0/1:18,0:15:55.21:55,0,92	0/1:25,0:23:39.22:166,0,39	0/1:20,0:20:29.06:173,0,29	0/1:8,0:5:1.53:40,0,2
chr10	63397847	.	A	AGAACC	918.18	PASS	AB=0.987;AC=10;AF=0.179;AN=56;BaseQRankSum=-3.208;DP=470;FS=5.699;HRun=0;HaplotypeScore=93.5689;InbreedingCoeff=-0.0092;MQ=35.74;MQ0=68;MQRankSum=0.693;QD=6.65;ReadPosRankSum=-0.070;VQSLOD=1.6717;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:12:30.08:0,30,376	0/1:9,0:8:28.02:28,0,181	0/0:13,0:2:6.02:0,6,106	0/1:14,0:3:0.02:0,0,53	0/0:19,0:12:27.06:0,27,363	0/0:17,0:16:14.02:0,14,118	0/0:17,0:16:29.71:0,30,223	0/1:21,0:16:99:218,0,350	0/0:15,0:11:17.98:0,18,227	0/0:19,0:16:18.88:0,19,188	0/1:11,0:10:6.53:7,0,120	0/1:14,0:13:49.87:50,0,164	0/0:17,0:15:27.65:0,28,309	0/0:21,0:16:19.31:0,19,260	0/0:18,0:15:0.21:0,0,224	0/0:19,0:15:15.51:0,16,170	0/0:18,5:21:20.17:0,20,212	0/1:16,0:10:42.56:110,0,43	0/0:20,0:18:35.73:0,36,390	0/0:9,0:8:20.23:0,20,225	0/0:10,0:7:11.49:0,11,88	0/0:11,0:9:14.94:0,15,233	0/0:22,0:19:37.29:0,37,601	0/0:20,0:16:20.95:0,21,304	0/0:18,0:15:11.90:0,12,283	0/1:24,1:23:99:427,0,182	0/1:19,0:19:42.20:42,0,321	1/1:8,0:5:9.03:173,9,0
chr10	63397850	.	A	ACC	381.81	PASS	AB=0.923;AC=6;AF=0.107;AN=56;BaseQRankSum=1.070;DP=461;FS=0.874;HRun=0;HaplotypeScore=74.5522;InbreedingCoeff=0.1753;MQ=34.52;MQ0=69;MQRankSum=-3.657;QD=5.02;ReadPosRankSum=0.693;VQSLOD=2.3828;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:11:3.13:0,3,242	0/1:9,0:8:3.55:4,0,150	0/0:13,0:2:6.02:0,6,73	0/0:14,0:3:4.91:0,5,20	0/0:20,0:13:28.79:0,29,288	0/0:18,0:17:15.04:0,15,181	0/0:17,0:16:41.84:0,42,484	0/1:17,3:15:99:128,0,311	0/0:15,0:11:18.02:0,18,215	0/0:19,0:16:24.54:0,25,300	0/0:10,0:9:20.78:0,21,186	0/0:12,0:10:27.07:0,27,323	0/0:18,0:16:23.10:0,23,300	0/0:21,0:16:37.77:0,38,389	0/0:17,0:14:36.09:0,36,438	0/0:17,0:13:17.95:0,18,208	0/0:25,0:17:12.64:0,13,166	0/1:16,0:9:38.18:70,0,38	0/0:22,0:20:48.93:0,49,565	0/0:9,0:8:20.60:0,21,209	0/0:10,0:7:12.51:0,13,142	0/0:14,0:12:18:0,18,207	0/0:24,0:21:38.45:0,38,471	0/0:21,0:17:21.49:0,21,259	0/0:17,0:14:36.02:0,36,411	0/1:18,5:20:99:170,0,162	0/0:15,0:15:45.05:0,45,542	1/1:3,5:5:9.03:129,9,0
chr10	63397857	.	A	AG	358.63	PASS	AB=0.952;AC=6;AF=0.107;AN=56;BaseQRankSum=1.326;DP=471;FS=10.899;HRun=0;HaplotypeScore=78.3235;InbreedingCoeff=0.5000;MQ=33.87;MQ0=71;MQRankSum=1.456;QD=4.43;ReadPosRankSum=2.227;VQSLOD=2.3166;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:14:28.97:0,29,188	0/0:9,0:7:20.66:0,21,132	0/0:12,0:1:2.04:0,2,6	0/0:13,0:3:5.75:0,6,46	0/0:21,0:15:32.95:0,33,189	0/0:17,0:16:11.21:0,11,63	0/0:17,0:16:41.54:0,42,261	0/0:26,0:19:47.01:0,47,299	0/0:15,0:11:20.34:0,20,141	0/0:21,0:18:21.76:0,22,131	0/0:11,0:10:15.59:0,16,96	0/0:12,0:10:25.86:0,26,166	1/1:18,0:16:8.27:116,8,0	0/0:21,0:16:30.84:0,31,162	0/0:17,0:14:37.76:0,38,251	0/0:17,0:13:29.42:0,29,191	0/0:22,0:14:23.58:0,24,139	0/0:15,0:8:11.77:0,12,78	0/0:22,0:20:47.25:0,47,312	0/0:12,0:10:19.65:0,20,113	0/0:8,0:5:8.84:0,9,55	0/1:13,0:11:40.66:41,0,42	0/1:25,3:25:41.02:185,0,41	1/1:19,3:17:22.91:146,23,0	0/0:16,0:13:32.02:0,32,197	0/0:24,0:21:37.54:0,38,209	0/0:15,0:15:42.68:0,43,285	0/0:7,0:4:8.85:0,9,58
chr10	63398160	.	TCACACC	T	1784.27	PASS	AB=0.599;AC=6;AF=0.111;AN=54;BaseQRankSum=3.547;DP=567;FS=5.054;HRun=0;HaplotypeScore=125.8343;InbreedingCoeff=0.5620;MQ=56.83;MQ0=12;MQRankSum=-6.731;QD=32.44;ReadPosRankSum=-2.049;VQSLOD=2.8920;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:77.60:0,78,2038	./.	0/0:35,0:9:11.79:0,12,97	0/0:45,0:18:26.81:0,27,484	0/0:10,0:10:24.08:0,24,804	0/0:19,0:19:41.29:0,41,1508	0/0:29,0:29:75.66:0,76,2247	1/1:17,1:16:18.55:594,19,0	0/0:20,0:20:10.79:0,11,1143	0/0:12,0:12:30.03:0,30,804	0/0:8,0:8:24:0,24,576	0/0:23,0:23:63.17:0,63,1951	0/0:19,0:19:54.17:0,54,1728	0/0:18,0:18:48.13:0,48,1476	0/0:15,0:15:38.88:0,39,1217	0/0:14,0:14:36.12:0,36,1126	0/1:4,14:16:16.61:504,0,17	0/1:3,4:7:94.43:255,0,94	0/0:10,0:10:30.09:0,30,825	0/0:11,0:11:27.06:0,27,689	0/0:94,0:91:99:0,228,7121	0/0:16,0:15:42.14:0,42,1292	0/0:7,0:7:15.02:0,15,408	0/0:46,0:46:99:0,132,3537	0/0:15,0:14:33.06:0,33,935	1/1:3,9:11:29.88:565,30,0	0/0:12,0:11:27.04:0,27,672	0/0:3,0:3:3.01:0,3,35
chr10	63398181	.	C	CA	417.74	PASS	AB=0.803;AC=6;AF=0.111;AN=54;BaseQRankSum=4.277;DP=581;FS=2.000;HRun=0;HaplotypeScore=91.8289;InbreedingCoeff=0.1561;MQ=53.39;MQ0=18;MQRankSum=-4.941;QD=8.35;ReadPosRankSum=-1.871;VQSLOD=2.9492;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:26:67.27:0,67,820	./.	0/0:33,0:6:10.79:0,11,90	0/0:44,0:13:16.15:0,16,208	0/0:12,0:11:30.08:0,30,383	0/0:21,0:21:54.05:0,54,672	0/0:28,0:28:78.21:0,78,1045	0/1:4,6:8:10.95:266,0,11	0/0:22,0:22:55.23:0,55,652	0/0:13,0:13:39.02:0,39,488	0/0:8,0:8:18.06:0,18,244	0/0:23,0:23:57.18:0,57,778	0/0:21,0:21:60.20:0,60,822	0/0:19,0:19:48.13:0,48,624	0/0:15,0:15:41.91:0,42,571	0/0:16,0:16:41.99:0,42,519	0/1:15,2:16:75.96:76,0,198	0/1:6,1:8:57.33:57,0,107	0/0:14,0:12:36.11:0,36,482	0/0:6,0:6:12.04:0,12,165	0/0:105,0:101:99:0,263,3593	0/0:16,0:16:42.13:0,42,569	0/0:10,0:10:14.98:0,15,191	0/0:46,0:46:99:0,120,1691	0/0:16,0:16:33.54:0,34,439	0/1:9,3:10:89.89:90,0,229	0/0:13,0:11:30.03:0,30,374	1/1:0,2:2:3.01:48,3,0
chr10	63398202	.	C	CA	290.96	PASS	AB=0.835;AC=4;AF=0.074;AN=54;BaseQRankSum=5.720;DP=550;FS=5.710;HRun=0;HaplotypeScore=94.3255;InbreedingCoeff=-0.0855;MQ=57.66;MQ0=17;MQRankSum=-4.427;QD=4.77;ReadPosRankSum=-0.383;VQSLOD=2.9470;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:18:39.48:0,39,452	./.	0/1:32,0:6:6.94:7,0,152	0/0:41,0:12:22.85:0,23,243	0/0:13,0:13:26.95:0,27,307	0/0:15,0:15:38.62:0,39,499	0/0:33,0:33:85.97:0,86,1091	0/0:12,0:8:21.07:0,21,268	0/0:19,0:19:49.41:0,49,671	0/0:19,0:18:45.06:0,45,531	0/0:7,0:7:11.99:0,12,136	0/0:23,0:23:60.09:0,60,769	0/0:17,0:17:48.13:0,48,635	0/0:18,0:18:54.05:0,54,670	0/0:12,0:12:33.03:0,33,419	0/0:15,0:15:36.12:0,36,497	0/1:7,7:13:99:203,0,106	0/1:6,1:7:67.87:68,0,86	0/0:10,0:9:27.08:0,27,363	0/0:5,0:5:9.03:0,9,126	0/0:104,0:101:99:0,220,3234	0/0:15,0:15:39.12:0,39,520	0/0:9,0:9:14.99:0,15,193	0/0:48,0:48:99:0,141,1892	0/0:16,0:16:27.05:0,27,352	0/1:6,2:6:68.15:117,0,68	0/0:13,0:12:30.08:0,30,386	0/0:4,0:3:6.02:0,6,83
chr10	63398210	.	ACACACT	A	1171.59	PASS	AB=0.750;AC=9;AF=0.167;AN=54;BaseQRankSum=5.487;DP=547;FS=0.000;HRun=0;HaplotypeScore=124.7717;InbreedingCoeff=0.7860;MQ=64.40;MQ0=13;MQRankSum=-4.810;QD=24.41;ReadPosRankSum=-1.276;VQSLOD=3.1692;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:27.37:0,27,836	./.	0/0:44,0:14:20.39:0,20,366	0/0:45,0:18:33.26:0,33,566	0/0:11,0:11:27.09:0,27,733	0/0:12,0:12:15.04:0,15,431	0/0:31,0:31:77.88:0,78,2240	1/1:11,2:9:15.03:205,15,0	0/0:18,0:18:45.15:0,45,1334	0/0:19,0:18:48.16:0,48,1514	0/0:6,0:6:8.99:0,9,257	0/0:19,0:19:36.08:0,36,985	0/0:17,0:17:39.13:0,39,1269	0/0:17,0:17:45.15:0,45,1336	0/0:12,0:12:27.04:0,27,722	0/0:14,0:14:36.12:0,36,1116	1/1:11,2:12:23.81:444,24,0	1/1:4,2:6:8.98:217,9,0	0/0:13,0:11:24.07:0,24,605	0/0:6,0:6:11.96:0,12,358	0/0:95,0:92:99:0,186,5204	0/0:13,0:13:29.89:0,30,782	0/0:11,0:11:18.91:0,19,537	0/0:49,0:49:99:0,123,3772	0/0:15,0:15:20.88:0,21,459	0/1:8,4:10:27.44:325,0,27	0/0:11,0:11:27.07:0,27,696	1/1:2,2:3:6.02:132,6,0
chr10	63398302	.	CA	C	1168.02	PASS	AB=0.992;AC=19;AF=0.339;AN=56;BaseQRankSum=9.500;DP=468;FS=0.839;HRun=1;HaplotypeScore=74.6911;InbreedingCoeff=0.4752;MQ=68.23;MQ0=4;MQRankSum=2.923;QD=5.43;ReadPosRankSum=5.615;VQSLOD=0.6855;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:14:29.23:0,29,371	0/0:8,0:7:20.97:0,21,254	0/0:37,0:14:34.24:0,34,331	0/0:38,1:19:21.05:0,21,277	0/0:7,0:7:12.02:0,12,160	1/1:7,1:8:13.74:77,14,0	0/1:26,0:26:34.42:153,0,34	0/0:7,0:7:19.30:0,19,257	0/0:15,0:15:39.04:0,39,512	0/1:15,1:15:4.15:58,0,4	1/1:9,0:9:15.57:71,16,0	1/1:12,2:14:8.77:157,9,0	0/0:15,0:15:38.96:0,39,494	1/1:13,0:13:22.55:111,23,0	0/1:10,0:10:0.68:76,0,1	1/1:20,0:20:5.45:150,5,0	0/0:24,0:23:59.71:0,60,760	0/0:13,0:13:20.92:0,21,445	0/1:10,0:9:14.09:14,0,61	0/1:7,0:7:10.89:11,0,11	1/1:68,0:60:41.86:398,42,0	0/0:12,0:12:18.04:0,18,253	0/0:9,0:9:9.79:0,10,302	0/0:29,0:29:76.31:0,76,1100	0/1:9,0:9:48.55:49,0,53	0/0:15,0:15:30.03:0,30,393	0/1:5,0:5:14.06:30,0,14	0/0:7,0:7:21.07:0,21,314
chr10	63398303	.	AC	A	4725.66	PASS	AB=0.912;AC=28;AF=0.500;AN=56;BaseQRankSum=2.042;DP=464;FS=1.423;HRun=5;HaplotypeScore=63.4463;InbreedingCoeff=0.8154;MQ=68.27;MQ0=4;MQRankSum=2.592;QD=19.94;ReadPosRankSum=3.479;VQSLOD=4.2745;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:14:21.06:0,21,271	0/0:8,0:7:15.05:0,15,203	0/0:35,1:14:30.99:0,31,263	0/0:39,0:19:2.53:0,3,206	0/0:7,0:7:9.02:0,9,107	1/1:3,5:8:12.03:132,12,0	1/1:4,22:26:60.17:680,60,0	0/0:7,0:7:17.77:0,18,198	0/0:15,0:15:33.10:0,33,434	1/1:3,11:13:27.08:305,27,0	1/1:2,7:9:18.04:195,18,0	1/1:3,11:14:33.09:373,33,0	0/0:15,0:15:38.93:0,39,432	1/1:1,12:13:24.95:274,25,0	1/1:0,9:9:24.07:272,24,0	1/1:2,18:20:45.13:509,45,0	0/0:21,0:21:53.88:0,54,674	0/1:11,1:12:0.91:1,0,342	1/1:6,5:9:12.03:136,12,0	1/1:0,7:7:6.02:68,6,0	1/1:11,59:62:99:1534,121,0	0/0:12,0:12:21.06:0,21,270	0/1:8,1:9:9.95:10,0,247	0/0:29,0:29:66.67:0,67,866	1/1:4,5:9:15.04:170,15,0	0/0:15,0:15:20.83:0,21,286	1/1:2,4:6:6.02:68,6,0	0/0:7,0:7:21.05:0,21,259
chr10	63401309	.	A	ATT	6990.41	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-2.561;DP=517;FS=11.263;HRun=10;HaplotypeScore=72.3587;InbreedingCoeff=0.9353;MQ=77.87;MQ0=1;MQRankSum=-0.498;QD=23.38;ReadPosRankSum=0.911;VQSLOD=3.1937;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:69.12:0,69,693	0/0:9,0:9:18.01:0,18,177	0/0:25,0:23:25.55:0,26,236	0/0:25,0:19:13.81:0,14,120	0/0:23,0:23:63.11:0,63,634	1/1:4,15:22:39.13:565,39,0	1/1:5,11:18:30.10:445,30,0	0/0:24,0:24:66.13:0,66,671	0/0:20,1:21:3.10:0,3,413	1/1:1,11:13:36.11:516,36,0	1/1:2,5:7:15.05:223,15,0	1/1:0,12:12:27.07:403,27,0	1/1:2,0:14:22.23:79,22,0	1/1:1,12:14:18.06:268,18,0	1/1:3,17:22:47.64:663,48,0	1/1:2,12:15:39.13:566,39,0	0/0:29,0:29:72.14:0,72,732	0/0:34,0:34:78.12:0,78,793	1/1:3,13:19:47.63:642,48,0	1/1:1,13:14:39.13:581,39,0	1/1:2,13:16:36.12:520,36,0	1/1:3,0:19:12.29:110,12,0	1/1:1,0:6:12.48:44,12,0	1/1:2,0:19:27.45:97,27,0	1/1:2,14:18:38.10:509,38,0	1/1:6,0:33:38.38:200,38,0	1/1:2,13:15:38.49:544,38,0	1/1:1,0:3:4.99:18,5,0
chr10	63401528	.	T	TAAA	2336.17	PASS	AB=0.900;AC=26;AF=0.481;AN=54;BaseQRankSum=8.534;DP=311;FS=1.776;HRun=3;HaplotypeScore=72.1915;InbreedingCoeff=0.6586;MQ=61.58;MQ0=4;MQRankSum=-6.590;QD=24.08;ReadPosRankSum=0.012;VQSLOD=0.7182;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:51.14:0,51,865	0/0:9,0:9:27.09:0,27,478	0/0:9,0:6:12.50:0,13,139	0/1:4,0:3:16.75:17,0,23	0/0:23,0:23:66.08:0,66,1020	1/1:9,11:19:47.05:768,47,0	1/1:2,1:3:0.22:60,0,0	0/0:33,0:32:96.27:0,96,1490	0/0:10,0:9:21:0,21,341	1/1:3,2:5:11.37:220,11,0	0/1:3,1:4:0.72:63,0,1	1/1:4,0:4:0.10:52,0,0	0/0:4,0:4:8.70:0,9,78	1/1:3,0:3:3.10:18,3,0	1/1:5,0:4:3.01:46,3,0	1/1:1,0:1:2.60:10,3,0	0/0:37,0:36:79.99:0,80,1288	0/0:29,0:29:78.23:0,78,1217	1/1:18,6:19:39.69:556,40,0	1/1:4,1:5:8.57:89,9,0	1/1:1,0:1:1.82:5,2,0	0/0:1,0:1:2.50:0,2,9	0/0:10,0:10:24.51:0,25,177	./.	1/1:8,4:12:33.41:434,33,0	0/0:18,0:18:54.16:0,54,886	1/1:5,1:6:16.96:183,17,0	0/0:9,0:9:24.08:0,24,368
chr10	63401532	.	A	ATAAAT	3446.90	PASS	AC=26;AF=0.481;AN=54;BaseQRankSum=5.201;DP=310;FS=7.687;HRun=0;HaplotypeScore=82.0624;InbreedingCoeff=0.8097;MQ=62.01;MQ0=3;MQRankSum=-5.684;QD=36.28;ReadPosRankSum=-0.854;VQSLOD=2.8245;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:48.15:0,48,1006	0/0:9,0:9:27.09:0,27,617	0/0:9,0:6:14.65:0,15,258	0/0:4,0:3:3.16:0,3,51	0/0:23,0:23:66.15:0,66,1277	1/1:8,11:18:50.95:1075,51,0	1/1:2,1:3:8.86:139,9,0	0/0:32,0:31:93.17:0,93,1804	0/0:11,0:10:24.07:0,24,467	1/1:4,2:6:11.64:256,12,0	1/1:4,1:5:9:188,9,0	1/1:4,0:4:6.65:77,7,0	0/0:6,0:6:15.03:0,15,238	1/1:3,0:3:4.08:35,4,0	1/1:5,0:5:3.01:49,3,0	1/1:1,0:1:3.01:50,3,0	0/0:36,0:35:83.97:0,84,1562	0/0:28,0:28:78.24:0,78,1592	1/1:19,6:20:47:662,47,0	1/1:5,1:6:13.06:189,13,0	1/1:1,0:1:3:25,3,0	0/0:1,0:1:1.55:0,2,4	0/0:10,0:10:27.90:0,28,449	./.	1/1:8,4:12:35.63:518,36,0	0/0:17,0:17:51.16:0,51,1064	1/1:4,1:5:14.62:185,15,0	0/0:9,0:9:24.08:0,24,493
chr10	63402818	.	AG	A	4675.42	PASS	AB=0.694;AC=50;AF=0.893;AN=56;BaseQRankSum=-2.411;DP=284;FS=9.948;HRun=1;HaplotypeScore=70.0220;InbreedingCoeff=0.2761;MQ=36.20;MQ0=5;MQRankSum=-1.364;QD=17.58;ReadPosRankSum=1.364;VQSLOD=4.1965;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,19:19:29.25:416,29,0	1/1:0,4:4:5.82:83,6,0	0/1:14,2:2:35.95:36,0,42	0/0:11,0:1:4.26:0,4,42	1/1:0,10:10:3.01:42,3,0	1/1:0,12:12:17.44:248,17,0	0/0:0,7:7:1.89:0,2,3	1/1:0,13:13:39.13:545,39,0	1/1:0,7:7:18.06:251,18,0	1/1:0,7:7:18.06:251,18,0	1/1:0,8:8:2.86:41,3,0	1/1:0,8:8:5.91:83,6,0	1/1:0,13:12:18.13:217,18,0	1/1:0,11:11:12:167,12,0	1/1:0,9:9:8.80:125,9,0	1/1:0,8:8:24.08:335,24,0	1/1:0,5:5:9.03:126,9,0	1/1:0,11:10:27.01:377,27,0	1/1:0,5:5:15.05:210,15,0	1/1:0,10:10:3.01:42,3,0	1/1:0,26:26:11.19:163,11,0	1/1:0,12:12:2.62:39,3,0	1/1:0,4:4:3:42,3,0	0/1:0,16:16:0.01:0,0,0	1/1:0,5:5:5.81:83,6,0	1/1:1,13:14:39.13:544,39,0	1/1:0,10:10:9.02:126,9,0	1/1:0,3:3:6.02:84,6,0
chr10	63402829	.	GCACA	G	1104.43	PASS	AB=0.650;AC=23;AF=0.479;AN=48;BaseQRankSum=1.353;DP=369;FS=8.797;HRun=0;HaplotypeScore=111.6971;InbreedingCoeff=0.6626;MQ=36.87;MQ0=10;MQRankSum=-2.784;QD=7.72;ReadPosRankSum=2.065;VQSLOD=2.0222;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:25:27.09:0,27,582	0/0:5,0:6:6.02:0,6,109	./.	./.	0/0:13,0:13:5.75:0,6,83	1/1:9,5:14:11.67:189,12,0	./.	0/0:14,0:13:3.01:0,3,52	1/1:1,0:6:12.01:112,12,0	1/1:10,3:12:15.05:236,15,0	1/1:4,6:10:5.40:94,5,0	1/1:4,6:10:6.91:88,7,0	0/0:15,0:24:16.72:0,17,347	1/1:7,5:12:9.03:128,9,0	1/1:5,4:11:3.01:48,3,0	1/1:7,1:9:5.97:48,6,0	0/0:11,0:11:12.88:0,13,198	0/0:16,0:17:24.86:0,25,345	1/1:6,1:7:6.02:81,6,0	0/1:6,6:13:3.80:86,0,4	1/1:26,2:28:6.02:95,6,0	0/0:13,0:20:8.62:0,9,153	0/0:4,0:7:2.57:0,3,52	0/0:9,0:19:5.66:0,6,90	./.	0/0:14,0:18:31.82:0,32,488	1/1:6,1:10:5.93:74,6,0	0/0:4,0:6:15.05:0,15,299
chr10	63402937	.	A	ATTTCT	2919.96	PASS	AB=0.693;AC=6;AF=0.107;AN=56;BaseQRankSum=-7.285;DP=681;FS=2.116;HRun=0;HaplotypeScore=128.4517;InbreedingCoeff=0.5839;MQ=68.55;MQ0=1;MQRankSum=-0.485;QD=34.35;ReadPosRankSum=-0.665;VQSLOD=3.2963;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:96.26:0,96,1688	0/1:2,11:14:22.69:825,0,23	0/0:30,0:22:9.51:0,10,99	0/0:36,0:21:16.20:0,16,359	0/0:31,0:31:63.22:0,63,1171	0/0:28,0:28:63.22:0,63,1163	0/0:21,0:21:45.15:0,45,837	0/1:23,5:28:31.74:441,0,32	0/0:25,0:25:51.17:0,51,948	0/0:37,0:37:69.19:0,69,1165	0/0:18,0:18:36.12:0,36,669	0/0:22,0:22:48.16:0,48,886	0/0:13,0:13:21.06:0,21,360	0/0:17,0:17:39.13:0,39,715	0/0:32,0:32:66.21:0,66,1186	0/0:24,0:24:66.21:0,66,1193	1/1:8,13:21:36.12:978,36,0	1/1:8,12:21:33.04:813,33,0	0/0:17,0:17:18:0,18,267	0/0:25,0:25:48.16:0,48,893	0/0:21,0:21:39.10:0,39,652	0/0:24,0:24:42.14:0,42,781	0/0:28,0:28:60.21:0,60,1116	0/0:29,0:29:57.20:0,57,1059	0/0:28,0:28:63.17:0,63,1136	0/0:18,0:18:39.12:0,39,694	0/0:18,0:18:30.10:0,30,557	0/0:8,0:8:6.02:0,6,112
chr10	63404484	.	G	GACAC	3765.74	PASS	AB=1.000;AC=38;AF=0.731;AN=52;BaseQRankSum=-0.918;DP=654;FS=3.472;HRun=0;HaplotypeScore=165.1477;InbreedingCoeff=0.3238;MQ=41.75;MQ0=28;MQRankSum=-0.348;QD=7.31;ReadPosRankSum=3.148;VQSLOD=2.5388;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:46,0:40:9.19:59,9,0	1/1:6,0:6:2.18:136,2,0	./.	./.	1/1:37,0:36:0.47:1,0,0	1/1:13,0:12:6.49:86,6,0	1/1:25,0:22:16.92:163,17,0	0/1:31,0:22:99:149,0,103	0/0:19,0:18:8.93:0,9,67	1/1:38,0:36:19.90:507,20,0	1/1:10,0:10:5.92:66,6,0	1/1:27,0:25:20.31:233,20,0	0/1:19,0:18:7.13:7,0,65	0/1:20,0:17:30.47:64,0,30	1/1:31,0:27:12.01:123,12,0	0/0:18,0:13:0:0,0,0	1/1:20,4:21:7.29:345,7,0	1/1:17,4:20:25.54:619,26,0	1/1:17,0:7:6.02:65,6,0	1/1:14,0:14:12.02:169,12,0	1/1:66,0:59:17.36:181,17,0	0/0:15,0:15:5.99:0,6,50	0/0:9,0:9:3.01:0,3,30	0/0:30,0:25:0:0,0,0	1/1:12,0:11:3.01:33,3,0	1/1:27,0:23:30.53:473,31,0	0/1:23,0:23:1.26:111,0,1	1/1:7,0:7:11.96:176,12,0
chr10	63404488	.	C	CACAG	6382.57	PASS	AB=1.000;AC=33;AF=0.589;AN=56;BaseQRankSum=0.157;DP=635;FS=5.851;HRun=0;HaplotypeScore=152.7985;InbreedingCoeff=0.5541;MQ=40.64;MQ0=33;MQRankSum=0.379;QD=15.27;ReadPosRankSum=4.791;VQSLOD=4.2744;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:38:18.02:0,18,116	0/1:6,0:6:20.60:90,0,21	0/0:16,0:8:14.90:0,15,109	0/0:24,0:13:32.86:0,33,304	0/0:39,0:37:17.86:0,18,134	1/1:12,0:11:17.91:221,18,0	1/1:24,0:21:38.96:458,39,0	0/1:33,0:20:53.38:53,0,263	0/0:18,0:17:26.79:0,27,248	1/1:36,0:34:62.67:1114,63,0	1/1:10,0:10:14.95:182,15,0	1/1:25,0:23:30.05:470,30,0	0/0:20,0:19:14.77:0,15,270	1/1:20,0:17:10.17:162,10,0	1/1:30,0:26:26.99:335,27,0	1/1:14,0:10:11.99:99,12,0	0/1:24,0:21:36.28:240,0,36	0/1:19,0:18:48.63:382,0,49	0/1:18,0:7:22.74:111,0,23	1/1:13,0:14:18.03:301,18,0	1/1:65,0:57:38.98:492,39,0	0/0:15,0:15:9.02:0,9,123	0/0:9,0:9:6.01:0,6,76	0/0:31,0:26:3:0,3,25	1/1:12,0:11:15:159,15,0	1/1:18,6:20:50.60:839,51,0	1/1:24,0:24:37.99:389,38,0	1/1:2,5:7:15:284,15,0
chr10	63404490	.	C	CAG	5580.78	PASS	AB=0.907;AC=31;AF=0.554;AN=56;BaseQRankSum=0.550;DP=633;FS=8.107;HRun=0;HaplotypeScore=144.3919;InbreedingCoeff=0.6106;MQ=40.03;MQ0=37;MQRankSum=0.772;QD=14.42;ReadPosRankSum=4.880;VQSLOD=4.2108;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:37:9.62:0,10,70	0/1:6,0:6:2.77:24,0,3	0/0:14,0:7:14.90:0,15,109	0/0:23,0:13:32.86:0,33,304	0/0:38,0:36:17.87:0,18,135	1/1:9,5:12:17.93:222,18,0	1/1:18,6:21:38.97:502,39,0	0/0:36,0:20:20.55:0,21,306	0/0:16,0:15:20.92:0,21,177	1/1:24,13:34:59.28:1155,59,0	1/1:4,6:10:14.97:207,15,0	1/1:8,15:21:30.07:474,30,0	0/0:20,0:19:25.26:0,25,271	0/1:10,9:16:2.58:198,0,3	1/1:16,13:25:26.99:335,27,0	1/1:11,4:10:12.01:149,12,0	0/1:24,0:21:57.56:68,0,58	0/1:18,0:17:51.90:55,0,52	0/1:15,3:7:25.08:117,0,25	1/1:10,6:16:18.03:255,18,0	1/1:48,16:55:38.98:499,39,0	0/0:15,0:15:9.02:0,9,114	0/0:9,0:9:6.01:0,6,62	0/0:31,0:26:3:0,3,25	1/1:9,3:11:15:159,15,0	1/1:23,3:21:50.31:544,50,0	1/1:17,7:24:49.95:517,50,0	1/1:8,0:8:11.81:103,12,0
chr10	63404500	.	CACACAGAG	C	1972.78	PASS	AB=0.997;AC=23;AF=0.442;AN=52;BaseQRankSum=2.693;DP=612;FS=0.698;HRun=0;HaplotypeScore=172.8882;InbreedingCoeff=-0.1641;MQ=35.48;MQ0=42;MQRankSum=-3.896;QD=4.39;ReadPosRankSum=0.775;VQSLOD=2.7345;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:40,2:35:10.49:38,0,10	1/1:6,0:6:5.27:130,5,0	./.	./.	0/0:14,23:35:3.01:0,3,44	0/0:12,0:9:0.24:0,0,12	0/1:21,0:18:35.55:36,0,41	0/1:45,0:18:54.90:55,0,105	0/1:17,0:16:51.34:51,0,135	0/1:43,0:39:99:281,0,144	0/0:11,0:11:6.25:0,6,31	0/1:23,0:21:32.01:37,0,32	0/1:16,0:15:97.27:108,0,97	0/0:18,0:15:14.07:0,14,115	0/1:25,0:21:14.21:14,0,24	0/0:11,0:6:0.94:0,1,1	1/1:23,0:21:34.22:397,34,0	1/1:17,0:16:19.91:304,20,0	0/1:16,0:6:23.66:32,0,24	0/1:18,0:18:5.19:28,0,5	0/1:69,0:54:43.91:48,0,44	0/0:15,0:15:5.99:0,6,50	0/0:8,0:8:3.01:0,3,73	0/0:31,0:26:3.01:0,3,49	0/1:15,0:14:10.01:22,0,10	1/1:24,0:19:33.68:304,34,0	0/1:21,0:20:23.15:201,0,23	1/1:8,0:8:7.91:42,8,0
chr10	63404504	.	CAGAG	C	2067.30	PASS	AB=0.939;AC=23;AF=0.442;AN=52;BaseQRankSum=0.318;DP=600;FS=5.778;HRun=0;HaplotypeScore=158.1013;InbreedingCoeff=-0.2981;MQ=34.51;MQ0=45;MQRankSum=-3.817;QD=4.52;ReadPosRankSum=-2.620;VQSLOD=2.0026;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:32,1:32:37.48:37,0,42	1/1:2,4:6:5.28:141,5,0	./.	./.	0/0:35,0:33:3.01:0,3,48	0/0:11,0:8:5.51:0,6,71	0/1:18,0:15:4.39:4,0,38	0/1:50,2:19:99:119,0,183	0/1:20,0:19:99:195,0,161	0/1:41,1:38:99:200,0,401	0/0:10,1:11:6.49:0,6,98	0/1:21,1:20:4.64:5,0,104	0/1:14,1:14:99:123,0,132	0/0:19,0:16:11.72:0,12,108	0/1:25,1:21:13.99:14,0,77	1/1:10,1:6:2.68:26,3,0	1/1:16,3:19:34.55:403,35,0	1/1:14,2:17:10.36:317,10,0	0/1:18,0:7:28.10:90,0,28	0/1:17,1:18:12.45:12,0,63	0/1:70,0:55:26.76:27,0,160	0/0:14,0:14:5.99:0,6,50	0/0:7,0:8:3.01:0,3,47	0/0:30,1:26:3.01:0,3,71	0/1:12,3:14:21.67:22,0,34	0/1:19,3:17:99:253,0,100	0/1:16,1:16:63.07:162,0,63	0/1:4,2:6:43.31:69,0,43
chr10	63404508	.	GACACACACAC	G	2545	PASS	AB=0.965;AC=29;AF=0.580;AN=50;BaseQRankSum=0.120;DP=590;FS=3.029;HRun=0;HaplotypeScore=177.5881;InbreedingCoeff=-0.1615;MQ=32.89;MQ0=52;MQRankSum=-3.073;QD=5.24;ReadPosRankSum=4.303;VQSLOD=2.6789;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:31,3:28:2.98:21,3,0	1/1:5,0:5:5.05:63,5,0	./.	./.	1/1:33,1:32:3:25,3,0	0/1:10,0:9:2.95:3,0,6	0/1:18,0:16:20.79:58,0,21	0/0:53,0:17:4.71:0,5,181	0/1:17,0:18:4.31:240,0,4	0/1:38,0:36:99:547,0,114	0/0:8,0:10:5.36:0,5,22	0/1:15,0:18:13.16:42,0,13	1/1:8,4:13:22.84:482,23,0	0/1:16,0:18:5.84:18,0,6	0/1:17,0:19:5.96:6,0,13	1/1:8,0:5:2.97:20,3,0	0/1:22,0:20:40.48:204,0,40	0/1:18,0:17:66.88:68,0,67	0/1:20,0:7:13.78:64,0,14	1/1:18,0:20:2.74:37,3,0	0/1:71,0:53:20.35:52,0,20	./.	0/0:7,3:11:2.74:0,3,12	1/1:10,20:25:2.04:6,2,0	0/1:13,0:15:5.80:33,0,6	0/1:17,0:13:2.88:170,0,3	1/1:10,0:13:18.15:527,18,0	0/0:7,0:6:4.72:0,5,32
chr10	63404520	.	CAGAG	C	798.47	PASS	AB=0.967;AC=22;AF=0.458;AN=48;BaseQRankSum=-1.036;DP=559;FS=19.000;HRun=0;HaplotypeScore=139.3332;InbreedingCoeff=-0.1994;MQ=31.75;MQ0=49;MQRankSum=-1.471;QD=2.06;ReadPosRankSum=-0.617;VQSLOD=1.1259;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:37,0:28:0.85:39,1,0	0/1:4,2:6:6.17:124,0,6	0/1:10,0:2:0.06:0,0,0	./.	./.	1/1:9,1:7:2.96:19,3,0	0/1:16,0:13:0.93:30,0,1	0/1:48,0:15:25.73:26,0,116	0/1:18,0:17:39.24:39,0,113	0/1:34,0:29:99:187,0,439	0/1:10,0:10:0:0,0,0	0/1:17,1:16:51.68:52,0,57	1/1:12,0:11:0.60:112,1,0	0/0:16,0:13:5.93:0,6,54	0/1:22,0:17:0.95:29,0,1	1/1:7,0:3:0.47:1,0,0	0/1:19,1:19:85.41:85,0,149	0/1:14,0:13:17.27:17,0,187	0/0:21,0:10:24.29:0,24,186	0/1:16,1:18:3.47:25,0,3	0/1:69,0:52:19.99:32,0,20	0/0:16,0:16:0:0,0,0	./.	./.	0/0:15,0:15:2.49:0,2,9	0/0:15,0:11:0.78:0,1,75	0/1:14,0:13:86.47:101,0,86	0/0:4,0:3:4.94:0,5,23
chr10	63404524	.	G	GAGAC	3484.74	PASS	AB=0.847;AC=33;AF=0.660;AN=50;BaseQRankSum=-2.527;DP=555;FS=5.809;HRun=0;HaplotypeScore=124.8943;InbreedingCoeff=0.0476;MQ=33.55;MQ0=53;MQRankSum=2.446;QD=8.18;ReadPosRankSum=1.971;VQSLOD=2.1896;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:35,1:28:5.83:114,6,0	0/0:8,0:7:1.69:0,2,7	0/0:12,0:3:5.69:0,6,66	./.	0/0:31,0:31:0:0,0,0	./.	0/0:6,13:16:5.08:0,5,14	0/1:49,0:15:14.85:15,0,35	1/1:17,0:16:23.36:564,23,0	0/1:23,8:26:55.64:735,0,56	./.	1/1:16,3:16:6.27:89,6,0	1/1:11,0:12:3.60:234,4,0	0/1:12,3:12:4.46:75,0,4	0/1:13,7:17:8.10:75,0,8	1/1:5,2:2:3.01:81,3,0	0/1:16,0:15:8.43:46,0,8	0/1:10,0:9:20.58:21,0,30	1/1:13,8:10:26.96:519,27,0	1/1:7,10:18:6.02:136,6,0	1/1:30,32:48:2.17:82,2,0	1/1:19,0:19:0.93:6,1,0	1/1:12,1:13:5.98:46,6,0	0/0:27,1:24:0:0,0,0	0/1:5,8:16:18.71:75,0,19	1/1:15,0:10:18.16:115,18,0	1/1:8,4:12:17.54:433,18,0	1/1:4,0:3:3.88:26,4,0
chr10	63404539	.	AG	A	1252.06	PASS	AB=0.829;AC=10;AF=0.179;AN=56;BaseQRankSum=-1.564;DP=559;FS=27.355;HRun=1;HaplotypeScore=112.6726;InbreedingCoeff=0.4132;MQ=42.09;MQ0=56;MQRankSum=-1.969;QD=9.56;ReadPosRankSum=-0.142;VQSLOD=-0.1346;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:29:20.96:0,21,292	0/1:2,4:9:20.38:60,0,20	0/0:22,0:5:9.92:0,10,135	0/0:20,0:6:2.92:0,3,32	0/0:33,0:31:11.63:0,12,150	0/0:11,0:9:8.94:0,9,126	0/0:21,0:15:6.02:0,6,96	1/1:30,18:23:1.78:557,2,0	0/0:16,0:15:30.46:0,30,367	0/0:24,0:21:57.16:0,57,745	0/0:8,0:8:3:0,3,25	0/0:16,0:13:12.50:0,13,157	0/0:14,0:12:25.32:0,25,326	0/0:14,0:12:11.03:0,11,103	0/0:18,0:17:7.17:0,7,79	0/0:9,0:6:9.01:0,9,105	1/1:3,6:17:17.73:339,18,0	1/1:3,3:12:14.73:245,15,0	0/0:20,0:12:30.08:0,30,369	0/0:15,0:15:12.04:0,12,163	0/0:67,0:47:18.53:0,19,261	0/0:20,0:17:6.02:0,6,93	0/0:13,0:12:5.94:0,6,90	0/1:24,0:19:0.08:0,0,0	0/0:16,0:16:8.94:0,9,124	0/1:4,3:9:2.44:172,0,2	0/0:12,0:11:22.25:0,22,283	0/1:2,1:3:18.80:19,0,36
chr10	63404568	.	CAG	C	674.11	PASS	AB=0.972;AC=24;AF=0.429;AN=56;BaseQRankSum=1.367;DP=624;FS=0.000;HRun=0;HaplotypeScore=126.6604;InbreedingCoeff=0.3463;MQ=43.62;MQ0=63;MQRankSum=1.237;QD=2.13;ReadPosRankSum=2.458;VQSLOD=2.1978;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:32:30.10:0,30,578	0/0:11,0:10:11.25:0,11,190	0/0:40,0:10:7.31:0,7,243	0/0:40,0:10:0.23:0,0,69	0/0:24,0:24:18.06:0,18,347	1/1:14,0:13:8.28:43,8,0	0/0:20,0:15:5.84:0,6,34	0/0:45,0:31:77.29:0,77,1319	0/0:23,0:22:38.86:0,39,657	0/1:25,0:23:53.05:145,0,53	1/1:11,0:10:5.64:26,6,0	0/1:17,1:15:4.79:36,0,5	0/1:18,1:16:29.48:72,0,29	0/1:20,0:17:7.66:37,0,8	1/1:19,1:17:11.85:57,12,0	0/1:16,1:16:3.07:89,0,3	0/0:23,0:21:7.69:0,8,451	0/0:17,0:14:22.26:0,22,517	0/1:12,0:7:27.59:39,0,28	1/1:26,0:25:19.63:102,20,0	1/1:45,0:33:11.18:58,11,0	1/1:26,0:23:5.72:28,6,0	1/1:17,0:15:5.54:24,6,0	0/1:14,0:12:0.13:0,0,0	1/1:19,0:18:13.16:69,13,0	0/0:17,0:15:9.31:0,9,595	0/1:13,1:12:27.84:28,0,40	0/0:10,0:9:3.83:0,4,22
chr10	63404570	.	GAC	G	2220.28	PASS	AB=0.758;AC=31;AF=0.554;AN=56;BaseQRankSum=0.176;DP=628;FS=0.620;HRun=0;HaplotypeScore=122.2938;InbreedingCoeff=0.5250;MQ=43.49;MQ0=68;MQRankSum=-0.286;QD=6.13;ReadPosRankSum=2.288;VQSLOD=3.3754;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:30:30.10:0,30,495	0/0:9,1:9:9.03:0,9,138	0/0:37,1:9:8.85:0,9,149	0/0:40,1:10:1.99:0,2,36	0/0:24,0:24:18.06:0,18,297	1/1:1,13:13:9.02:109,9,0	0/0:14,5:14:0:0,0,0	0/0:48,0:33:30.38:0,30,808	0/0:24,0:23:39.08:0,39,589	1/1:9,17:24:42.59:506,43,0	0/1:6,7:11:7.96:66,0,8	0/1:6,14:17:20.21:132,0,20	1/1:11,8:16:15.84:165,16,0	1/1:7,14:18:5.93:75,6,0	1/1:9,11:16:15.01:171,15,0	1/1:4,13:16:12.04:144,12,0	0/1:21,1:20:39.42:39,0,343	0/0:17,0:14:31.40:0,31,434	1/1:8,4:7:12.04:145,12,0	1/1:10,15:24:20.95:250,21,0	1/1:24,19:30:15.03:171,15,0	1/1:8,18:23:6.02:75,6,0	1/1:5,12:15:6.02:74,6,0	0/1:7,8:13:0:0,0,0	1/1:7,13:19:11.86:138,12,0	0/1:16,1:15:35.47:35,0,466	1/1:8,7:12:8.88:112,9,0	0/0:10,0:9:4.68:0,5,24
chr10	63404598	.	CAG	C	855.78	PASS	AB=0.960;AC=29;AF=0.518;AN=56;BaseQRankSum=-0.961;DP=722;FS=21.629;HRun=0;HaplotypeScore=136.2995;InbreedingCoeff=-0.5128;MQ=36.12;MQ0=116;MQRankSum=-1.054;QD=1.31;ReadPosRankSum=-3.398;VQSLOD=0.1706;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:42,1:33:1.47:1,0,341	0/1:14,0:13:9.05:32,0,9	1/1:9,0:3:8.16:44,8,0	0/1:15,0:5:0.72:1,0,15	0/1:23,0:22:16:16,0,223	0/1:24,0:20:37.02:37,0,58	0/1:28,0:12:31.42:31,0,36	0/0:44,0:15:12.59:0,13,250	0/0:27,0:24:16.99:0,17,534	0/1:38,0:32:23.33:23,0,457	0/1:19,1:17:9.68:10,0,71	0/1:32,0:27:26.59:27,0,138	0/1:11,14:22:19.20:35,0,19	0/1:29,0:24:29.62:30,0,35	0/1:25,0:19:3.07:3,0,118	0/1:25,0:20:6.71:7,0,51	0/1:17,0:14:34.35:49,0,34	0/1:24,0:21:60.94:61,0,80	0/1:28,0:11:17.19:17,0,115	0/1:27,0:25:22.27:22,0,196	0/1:57,1:34:36.84:64,0,37	0/1:25,4:24:10.79:60,0,11	0/1:12,8:18:2.65:82,0,3	1/1:15,3:13:5.57:61,6,0	0/1:24,0:21:50.79:51,0,83	0/1:20,0:16:7:87,0,7	0/1:19,0:17:44.59:76,0,45	1/1:15,0:10:16.52:81,17,0
chr10	63404600	.	GAC	G	921.17	PASS	AB=0.892;AC=18;AF=0.333;AN=54;BaseQRankSum=2.283;DP=729;FS=12.439;HRun=0;HaplotypeScore=138.9637;InbreedingCoeff=0.5537;MQ=36.25;MQ0=119;MQRankSum=-2.311;QD=3.56;ReadPosRankSum=-1.046;VQSLOD=1.3846;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,1:33:25.43:0,25,227	0/1:12,3:14:0.49:66,0,0	./.	0/0:14,0:5:0.47:0,0,1	0/0:20,0:21:14.88:0,15,124	0/0:24,1:21:4.24:0,4,68	0/0:29,0:13:6.07:0,6,64	1/1:45,1:13:3.01:34,3,0	0/1:27,2:26:3.26:3,0,388	0/0:39,0:33:57.51:0,58,516	0/0:18,1:16:11.43:0,11,124	0/0:31,0:26:28.68:0,29,228	1/1:20,0:21:5.71:38,6,0	0/0:28,1:24:0.95:0,1,42	0/0:24,0:19:14.04:0,14,129	0/0:26,0:21:4.62:0,5,114	1/1:14,2:14:8.63:141,9,0	0/1:22,2:21:0.79:161,0,1	0/0:28,0:11:8.85:0,9,61	0/0:28,0:25:25.95:0,26,238	0/0:58,1:35:8.77:0,9,87	1/1:16,0:22:9.81:45,10,0	0/1:18,0:19:7.71:45,0,8	1/1:16,0:13:4.90:27,5,0	0/0:24,0:21:10.25:0,10,76	1/1:15,6:17:38.60:397,39,0	0/0:20,0:18:13.01:0,13,70	1/1:8,7:10:15.49:132,15,0
chr10	63404618	.	CAG	C	925.81	PASS	AB=1.000;AC=21;AF=0.389;AN=54;BaseQRankSum=6.118;DP=717;FS=0.525;HRun=0;HaplotypeScore=130.3411;InbreedingCoeff=0.0679;MQ=35.35;MQ0=122;MQRankSum=-2.764;QD=2.18;ReadPosRankSum=-0.873;VQSLOD=2.0588;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:47,0:36:68.67:69,0,202	1/1:13,0:12:19.14:113,19,0	0/0:2,0:2:5.21:0,5,22	./.	0/1:21,0:19:36.46:36,0,142	0/0:26,0:21:11.82:0,12,93	0/0:25,0:11:3.73:0,4,137	0/1:42,0:9:7.77:8,0,12	0/0:26,0:22:17.24:0,17,502	0/1:41,0:36:26.54:27,0,544	0/0:19,0:16:8.53:0,9,155	0/1:34,0:27:0.51:1,0,267	0/1:26,0:22:12.03:28,0,12	0/0:30,0:24:12.31:0,12,90	0/0:25,0:18:9.01:0,9,106	0/0:30,0:22:3.80:0,4,181	1/1:15,1:12:19.88:115,20,0	1/1:15,9:20:8.73:302,9,0	0/1:27,0:10:16.64:17,0,137	0/0:32,0:29:6.36:0,6,284	0/0:60,0:35:19.99:0,20,161	0/1:26,0:22:30.76:31,0,35	0/1:20,0:19:13.73:14,0,96	0/0:16,0:10:2.03:0,2,12	0/1:23,0:19:35.12:35,0,85	1/1:24,1:19:10.87:209,11,0	0/1:22,0:20:4.86:5,0,160	1/1:16,0:12:7.77:84,8,0
chr10	63404622	.	CACACACACACACAG	C	1464.25	PASS	AB=1.000;AC=8;AF=0.148;AN=54;BaseQRankSum=1.049;DP=728;FS=0.000;HRun=0;HaplotypeScore=198.5662;InbreedingCoeff=0.5858;MQ=35.07;MQ0=126;MQRankSum=-4.668;QD=14.94;ReadPosRankSum=-0.767;VQSLOD=2.5186;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:32:21.05:0,21,638	1/1:13,0:12:14.99:285,15,0	0/0:4,0:2:6.02:0,6,83	./.	0/0:22,0:20:21.50:0,22,542	0/0:27,0:22:9.03:0,9,190	0/0:27,0:13:15.52:0,16,322	0/0:41,0:9:2.22:0,2,7	0/0:26,0:22:27.98:0,28,1174	0/0:42,0:37:67.42:0,67,1527	0/0:18,0:15:15.52:0,16,488	0/0:32,0:25:24.55:0,25,836	0/0:28,0:24:8.90:0,9,220	0/0:31,0:24:11.35:0,11,223	0/0:25,0:17:8.85:0,9,272	0/0:33,0:25:16.73:0,17,421	0/1:16,0:12:29.22:43,0,29	0/1:24,0:20:5.35:473,0,5	0/0:24,0:8:12.51:0,13,244	0/0:31,0:28:32.33:0,32,713	0/0:64,0:36:16.30:0,16,406	0/0:27,0:23:9.03:0,9,206	0/0:20,0:19:21.07:0,21,475	0/0:15,0:9:6.49:0,6,111	0/0:24,0:20:15.73:0,16,368	1/1:27,0:21:14.15:285,14,0	0/0:22,0:20:21.40:0,21,431	1/1:13,5:13:15.05:524,15,0
chr10	63404634	.	CAG	C	471.50	PASS	AB=0.957;AC=9;AF=0.161;AN=56;BaseQRankSum=6.587;DP=710;FS=0.605;HRun=0;HaplotypeScore=119.3969;InbreedingCoeff=-0.1126;MQ=37.35;MQ0=136;MQRankSum=-4.159;QD=2.27;ReadPosRankSum=-1.891;VQSLOD=2.0415;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:25:13.97:0,14,313	0/1:12,0:12:7.70:68,0,8	0/0:14,0:3:5.97:0,6,49	0/0:13,0:2:0:0,0,1	0/1:22,0:20:4.36:4,0,291	0/0:25,0:19:8.90:0,9,172	0/0:28,0:13:4.43:0,4,262	0/0:32,1:6:0.44:0,0,2	0/0:23,0:19:30.81:0,31,502	0/1:46,0:40:46.36:46,0,1040	0/0:18,0:15:3.99:0,4,272	0/0:29,0:23:2.02:0,2,391	0/0:27,0:23:5.70:0,6,120	0/0:29,0:21:12.81:0,13,182	0/0:23,0:13:5.56:0,6,115	0/0:31,0:23:3.14:0,3,222	0/1:12,1:9:40.55:49,0,41	0/1:22,0:18:3.15:253,0,3	0/0:21,0:8:3.62:0,4,194	0/0:27,1:25:8.10:0,8,416	0/0:61,0:33:14.60:0,15,281	0/0:25,0:21:9.03:0,9,165	0/0:22,0:21:13.02:0,13,322	0/0:14,0:8:6.02:0,6,83	0/1:23,0:19:6.98:7,0,178	0/1:23,0:16:77.44:77,0,97	0/1:25,0:21:3.95:4,0,269	0/1:13,8:15:16.67:85,0,17
chr10	63404636	.	G	GAC	824.71	PASS	AB=0.976;AC=11;AF=0.196;AN=56;BaseQRankSum=4.986;DP=720;FS=0.744;HRun=0;HaplotypeScore=122.5220;InbreedingCoeff=0.6647;MQ=38.19;MQ0=139;MQRankSum=-5.092;QD=6.30;ReadPosRankSum=-0.600;VQSLOD=2.9365;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:26:10.05:0,10,204	1/1:12,0:12:14.79:137,15,0	0/0:16,0:4:5.98:0,6,58	0/1:12,0:2:0:1,0,0	0/0:22,0:20:20.70:0,21,237	0/0:25,0:19:8.89:0,9,112	0/0:28,0:13:15.89:0,16,172	0/0:35,0:6:1.68:0,2,5	0/0:23,0:19:27.07:0,27,331	0/0:47,0:41:78.79:0,79,951	0/0:18,0:15:15.05:0,15,188	0/0:29,0:23:22.57:0,23,266	0/0:27,1:23:10.16:0,10,95	0/0:28,0:20:12.38:0,12,130	0/1:21,0:12:3.68:4,0,66	0/0:31,0:23:15.52:0,16,184	0/1:14,0:10:1.81:68,0,2	1/1:24,1:19:32.76:418,33,0	0/0:20,0:7:6.18:0,6,108	0/0:28,0:25:15.81:0,16,287	0/0:61,0:34:14.99:0,15,187	0/0:23,3:22:9.01:0,9,113	0/0:21,0:21:20.58:0,21,262	0/0:16,0:9:5.88:0,6,75	0/0:22,0:18:10.87:0,11,148	1/1:23,0:16:20.72:251,21,0	0/0:24,0:20:20.64:0,21,227	1/1:22,0:16:15.73:104,16,0
chr10	63412813	.	CG	C	2614.52	PASS	AB=1.000;AC=42;AF=0.750;AN=56;BaseQRankSum=-2.830;DP=416;FS=2.251;HRun=3;HaplotypeScore=51.4237;InbreedingCoeff=0.6319;MQ=45.78;MQ0=37;MQRankSum=-2.786;QD=9.47;ReadPosRankSum=1.668;VQSLOD=1.2102;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:24:29.88:0,30,236	1/1:7,0:7:3:27,3,0	0/0:23,1:11:13.55:0,14,116	0/0:39,0:12:14.07:0,14,83	0/0:31,0:26:52.52:0,53,407	1/1:8,0:6:17.77:121,18,0	1/1:10,0:9:5.93:42,6,0	1/1:18,0:14:29.78:213,30,0	0/0:7,0:7:17.29:0,17,110	1/1:15,0:14:14.91:121,15,0	1/1:10,0:10:26.66:185,27,0	1/1:11,0:12:26.72:219,27,0	1/1:9,0:9:8.98:72,9,0	1/1:9,0:9:5.99:48,6,0	1/1:17,0:14:8.93:66,9,0	1/1:9,0:9:17.68:128,18,0	1/1:24,0:22:56.24:381,56,0	1/1:16,0:13:3.38:115,3,0	1/1:11,2:10:26.76:193,27,0	1/1:14,0:12:17.82:121,18,0	1/1:15,0:12:23.85:187,24,0	1/1:11,0:11:5.98:46,6,0	1/1:12,1:12:20.68:151,21,0	1/1:14,0:13:5.98:46,6,0	0/0:10,0:9:2.84:0,3,14	0/1:15,0:15:5.39:208,0,5	1/1:7,0:5:5.99:48,6,0	0/1:10,0:5:8.54:55,0,9
chr10	63412815	.	GGAAAAAAA	G	2624.74	PASS	AB=0.879;AC=36;AF=0.643;AN=56;BaseQRankSum=-2.201;DP=429;FS=1.782;HRun=0;HaplotypeScore=78.7828;InbreedingCoeff=0.2682;MQ=44.71;MQ0=44;MQRankSum=-0.912;QD=9.58;ReadPosRankSum=2.489;VQSLOD=1.6729;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:25:42.41:0,42,669	1/1:1,0:4:3.01:53,3,0	0/0:27,0:11:20.27:0,20,539	0/0:44,0:12:19.46:0,19,428	0/0:35,0:30:73.57:0,74,1143	0/1:9,0:6:49.39:49,0,74	1/1:2,0:8:3.22:12,3,0	1/1:17,0:11:28.36:195,28,0	0/0:8,0:7:21:0,21,368	0/1:3,0:11:81.71:86,0,82	0/1:10,0:10:15.39:98,0,15	0/1:12,0:12:10.53:174,0,11	1/1:1,1:8:9.03:199,9,0	1/1:2,0:8:5.75:43,6,0	0/1:3,0:13:5.25:15,0,5	0/1:7,0:7:34.56:35,0,118	1/1:18,1:21:38.20:474,38,0	1/1:15,0:12:4.85:109,5,0	1/1:14,0:10:9.61:143,10,0	1/1:2,12:12:17.60:121,18,0	1/1:15,0:11:23.85:186,24,0	1/1:0,10:11:3.10:139,3,0	1/1:12,0:11:20.71:203,21,0	1/1:3,14:16:6.02:153,6,0	0/0:3,0:9:8.76:0,9,129	0/1:16,0:15:60.48:205,0,60	1/1:3,0:5:6.02:107,6,0	0/1:11,0:5:8.85:9,0,80
chr10	63413163	.	C	CT	1133.60	PASS	AB=0.839;AC=34;AF=0.607;AN=56;BaseQRankSum=2.224;DP=452;FS=2.788;HRun=16;HaplotypeScore=82.9840;InbreedingCoeff=0.3400;MQ=58.20;MQ0=14;MQRankSum=-3.548;QD=3.56;ReadPosRankSum=-3.112;VQSLOD=-0.0584;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:10,1:22:21.14:114,21,0	0/0:9,0:9:17.44:0,17,100	0/0:17,0:6:1.92:0,2,6	0/0:12,0:8:4.32:0,4,16	1/1:17,0:19:10.93:73,11,0	0/1:11,2:15:5.29:79,0,5	1/1:7,8:15:2.08:105,2,0	0/0:30,0:34:27.81:0,28,139	1/1:10,0:15:18.41:106,18,0	0/1:13,6:19:16.86:54,0,17	0/1:5,7:13:1.74:63,0,2	0/0:7,8:15:4.14:0,4,30	1/1:9,0:9:10.24:54,10,0	1/1:3,9:11:8.36:56,8,0	1/1:10,7:16:5.50:67,5,0	1/1:6,3:9:5.94:43,6,0	0/1:46,2:46:33.92:34,0,196	0/0:17,2:18:2.97:0,3,110	0/1:14,1:15:10.51:69,0,11	0/1:11,1:11:6.81:38,0,7	1/1:7,3:7:2.94:18,3,0	1/1:6,0:12:4.56:18,5,0	1/1:4,0:7:5.68:28,6,0	1/1:11,1:17:17.07:99,17,0	1/1:8,2:10:10.20:90,10,0	0/0:11,0:19:24.80:0,25,81	1/1:5,15:20:11.97:96,12,0	0/0:2,0:7:3.58:0,4,10
chr10	63415469	.	G	GT	1989.99	PASS	AB=0.787;AC=35;AF=0.625;AN=56;BaseQRankSum=-3.299;DP=660;FS=3.148;HRun=16;HaplotypeScore=106.3412;InbreedingCoeff=0.1201;MQ=74.76;MQ0=3;MQRankSum=-0.391;QD=3.82;ReadPosRankSum=-1.943;VQSLOD=0.7773;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:46:38.08:0,38,147	0/1:10,2:12:21.11:86,0,21	0/0:31,0:26:3.70:0,4,55	0/1:26,0:17:8.13:18,0,8	0/0:17,0:21:7.20:0,7,28	1/1:8,12:22:21.74:141,22,0	0/1:6,14:20:7.78:39,0,8	0/1:19,6:25:2.05:79,0,2	0/0:17,0:27:18.17:0,18,63	1/1:20,10:33:23.19:153,23,0	1/1:7,11:19:4.13:109,4,0	0/1:9,12:21:11.12:38,0,11	1/1:24,0:24:25.11:134,25,0	0/1:21,0:21:9.09:88,0,9	1/1:16,5:23:22.78:237,23,0	1/1:17,11:30:10.27:103,10,0	0/1:17,13:30:41.68:96,0,42	0/1:8,12:21:32.08:44,0,32	1/1:13,6:20:21.68:171,22,0	1/1:18,2:20:24.58:164,25,0	0/1:11,2:17:2.69:88,0,3	1/1:7,0:22:9.88:67,10,0	1/1:10,1:22:9.11:48,9,0	1/1:12,0:22:2.84:14,3,0	0/1:10,10:21:5.45:38,0,5	0/1:22,2:24:42.59:43,0,43	1/1:22,2:24:3.34:162,3,0	0/0:14,0:14:9.39:0,9,54
chr10	63415485	.	TG	T	328.88	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.229;DP=548;FS=11.155;HRun=1;HaplotypeScore=71.9863;InbreedingCoeff=0.9459;MQ=81.57;MQ0=2;MQRankSum=-0.053;QD=9.67;ReadPosRankSum=1.732;VQSLOD=0.2491;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:29.97:0,30,289	0/0:15,0:15:44.79:0,45,371	0/0:20,0:18:25.06:0,25,250	0/0:20,0:17:23.68:0,24,186	0/0:21,2:23:42.77:0,43,309	0/0:14,0:14:26.84:0,27,220	0/0:18,0:18:17.18:0,17,140	0/0:22,0:22:51.44:0,51,462	0/0:20,2:22:15.90:0,16,198	0/0:19,0:19:40.10:0,40,346	0/0:15,0:15:29.47:0,29,231	0/0:19,0:19:29.98:0,30,259	0/0:16,0:16:32.93:0,33,275	0/0:19,0:19:24.01:0,24,232	0/0:25,0:25:58.31:0,58,464	0/0:21,0:21:33.81:0,34,277	0/0:21,0:21:35.21:0,35,313	0/0:14,0:14:23.90:0,24,218	0/0:21,0:21:51.24:0,51,419	0/0:22,0:22:42.48:0,42,322	0/0:17,0:17:38.14:0,38,303	0/0:20,0:20:40.84:0,41,298	0/0:14,0:14:26.79:0,27,207	0/0:15,0:15:20.97:0,21,171	0/0:15,0:15:16.09:0,16,119	1/1:21,0:22:9.81:296,10,0	0/0:24,0:24:44.18:0,44,384	1/1:10,2:12:22.20:147,22,0
chr10	63416435	.	C	CT	11709.14	PASS	AB=0.955;AC=43;AF=0.768;AN=56;BaseQRankSum=-11.066;DP=522;FS=4.511;HRun=7;HaplotypeScore=50.5264;InbreedingCoeff=0.9055;MQ=69.01;MQ0=2;MQRankSum=-2.501;QD=28.70;ReadPosRankSum=1.323;VQSLOD=5.5396;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:90.14:0,90,869	1/1:5,13:19:39.12:471,39,0	0/1:20,1:14:3.94:4,0,225	0/0:17,1:15:17.03:0,17,143	0/0:24,0:24:66.07:0,66,625	1/1:0,22:22:63.19:761,63,0	1/1:2,15:17:45.14:544,45,0	1/1:8,19:28:62.99:710,63,0	0/0:11,0:11:30.03:0,30,283	1/1:3,10:14:36.11:430,36,0	1/1:2,18:20:48.11:563,48,0	1/1:1,15:16:39.12:471,39,0	1/1:2,17:19:48.15:580,48,0	1/1:2,8:10:21.06:254,21,0	1/1:2,12:14:33.10:399,33,0	1/1:1,8:9:24.07:290,24,0	1/1:2,33:35:90.28:1087,90,0	1/1:2,16:18:42.13:507,42,0	1/1:1,12:13:36.11:434,36,0	1/1:0,22:22:63.15:745,63,0	1/1:0,17:17:48.15:580,48,0	1/1:2,28:30:81.21:962,81,0	1/1:0,18:18:51.16:614,51,0	1/1:3,13:16:36.11:435,36,0	1/1:2,12:14:33.10:399,33,0	0/0:25,0:24:66.10:0,66,637	1/1:1,15:16:39.12:471,39,0	0/0:2,0:2:6.01:0,6,58
chr10	63416579	.	TTGTGTGTGTG	T	3087.51	PASS	AB=0.830;AC=36;AF=0.750;AN=48;BaseQRankSum=4.406;DP=549;FS=0.874;HRun=0;HaplotypeScore=162.0078;InbreedingCoeff=0.4345;MQ=64.02;MQ0=12;MQRankSum=-5.945;QD=8.75;ReadPosRankSum=2.252;VQSLOD=2.6801;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:39.12:0,39,1548	./.	./.	./.	0/0:22,0:21:21.07:0,21,797	1/1:11,4:15:6.02:176,6,0	1/1:20,7:27:9.03:234,9,0	./.	1/1:9,0:13:5.86:139,6,0	1/1:22,4:24:5.69:139,6,0	1/1:13,2:15:6.49:177,6,0	1/1:18,0:21:6:94,6,0	1/1:9,0:12:9.03:209,9,0	1/1:12,3:16:12.04:334,12,0	1/1:8,6:13:12.04:353,12,0	1/1:13,3:16:3.01:88,3,0	1/1:18,0:22:9.03:209,9,0	0/1:18,0:20:63.75:64,0,88	1/1:18,1:19:1.88:87,2,0	1/1:16,3:19:3.01:88,3,0	0/0:36,0:33:0.15:0,0,0	1/1:7,0:10:6.02:140,6,0	1/1:10,0:12:3.01:64,3,0	1/1:23,0:31:12.04:271,12,0	1/1:14,8:22:8.99:196,9,0	0/0:18,0:18:29.42:0,29,1021	0/1:14,6:19:1.60:168,0,2	0/0:2,0:1:3.01:0,3,141
chr10	63416817	.	C	CT	4875.34	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-5.203;DP=547;FS=18.698;HRun=1;HaplotypeScore=56.7404;InbreedingCoeff=0.9964;MQ=72.60;MQ0=0;MQRankSum=-0.625;QD=43.14;ReadPosRankSum=-0.291;VQSLOD=2.7073;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,44:44:99:1888,126,0	0/0:7,0:7:21.06:0,21,258	0/0:9,0:9:24.04:0,24,273	0/0:9,0:9:18.05:0,18,221	1/1:1,25:26:75.25:1124,75,0	0/0:18,0:18:51.17:0,51,661	0/0:23,0:23:66.21:0,66,856	0/0:31,0:31:90.28:0,90,1155	1/1:0,13:13:39.13:585,39,0	0/0:28,0:28:75.24:0,75,974	0/0:14,0:14:39.13:0,39,506	0/0:16,0:16:48.16:0,48,623	0/0:16,0:16:39.13:0,39,506	0/0:14,0:14:39.11:0,39,492	0/0:19,0:19:51.17:0,51,661	0/0:16,0:16:48.16:0,48,622	0/0:21,0:21:63.20:0,63,818	0/0:22,0:23:42.42:0,42,830	0/0:22,0:22:60.19:0,60,779	0/0:20,0:20:60.18:0,60,762	0/0:23,0:23:60.19:0,60,779	0/0:20,0:20:57.18:0,57,738	0/0:18,0:18:51.16:0,51,661	0/0:21,0:21:60.19:0,60,778	0/0:19,0:19:57.19:0,57,740	1/1:0,21:21:60.19:874,60,0	0/0:27,0:27:78.25:0,78,1010	1/1:0,9:9:27.09:405,27,0
chr10	63419419	.	G	GA	2006.16	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-5.512;DP=628;FS=4.859;HRun=5;HaplotypeScore=60.6435;InbreedingCoeff=0.9399;MQ=64.55;MQ0=0;MQRankSum=-0.303;QD=31.35;ReadPosRankSum=-1.617;VQSLOD=3.6931;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,31:32:84.23:1081,84,0	0/0:11,0:11:30.08:0,30,322	0/0:13,0:12:27.06:0,27,285	0/0:12,0:11:5.21:0,5,224	1/1:2,29:32:84.18:1046,84,0	0/0:15,0:15:45.11:0,45,483	0/0:20,0:20:54.10:0,54,561	0/0:32,0:32:84.21:0,84,903	0/0:14,0:14:39.10:0,39,419	0/0:23,0:23:57:0,57,595	0/0:26,0:26:69.16:0,69,734	0/0:16,0:16:45.09:0,45,475	0/0:21,0:21:54.13:0,54,580	0/0:24,0:24:54.13:0,54,580	0/0:33,0:33:84.20:0,84,901	0/0:23,0:23:66.16:0,66,708	0/0:20,0:20:57.14:0,57,612	0/0:17,0:17:45.11:0,45,482	0/0:25,0:25:54.13:0,54,581	0/0:33,0:33:99:0,99,1055	0/0:13,0:13:39.10:0,39,419	0/0:25,0:25:69.16:0,69,733	0/0:24,0:24:60.15:0,60,645	0/0:26,0:26:72.18:0,72,773	0/0:27,0:27:75.19:0,75,804	0/0:27,0:27:75.14:0,75,786	0/0:31,0:31:90.18:0,90,947	0/0:13,0:13:36.09:0,36,387
chr10	63420015	.	TTGTG	T	1108.32	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=0.146;DP=540;FS=6.366;HRun=0;HaplotypeScore=128.7275;InbreedingCoeff=0.4138;MQ=53.50;MQ0=11;MQRankSum=1.773;QD=9.90;ReadPosRankSum=0.454;VQSLOD=2.6348;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:13,33:47:27.75:819,28,0	0/0:8,0:8:11.96:0,12,116	0/0:20,0:15:0:0,0,0	0/0:16,0:13:13.47:0,13,137	1/1:8,5:13:18.06:286,18,0	0/0:14,0:13:9.03:0,9,181	0/0:30,0:28:20.89:0,21,264	0/0:21,0:20:11.96:0,12,134	0/0:11,0:25:36.12:0,36,670	0/0:16,0:17:30.09:0,30,472	0/0:12,0:11:18:0,18,184	0/0:16,0:16:17.60:0,18,177	0/0:25,0:25:24.39:0,24,173	0/0:22,0:20:9.03:0,9,167	0/0:16,0:15:14.03:0,14,139	0/0:23,0:23:20.40:0,20,279	0/0:19,0:16:9.01:0,9,113	0/1:19,0:19:4.24:4,0,103	0/0:19,0:17:24.03:0,24,402	0/0:19,0:19:11.95:0,12,104	0/0:26,0:26:11.99:0,12,110	0/0:16,0:16:7.82:0,8,81	0/0:17,0:16:4.07:0,4,91	0/0:24,0:24:5.22:0,5,76	0/0:18,0:18:12.49:0,12,163	0/1:19,0:19:99:125,0,108	0/1:13,0:12:4.99:5,0,147	0/0:5,0:5:6.01:0,6,75
chr10	63420036	.	T	TGTGTGTGA	2647.11	PASS	AB=1.000;AC=27;AF=0.482;AN=56;BaseQRankSum=0.646;DP=617;FS=5.534;HRun=0;HaplotypeScore=171.4388;InbreedingCoeff=-0.1610;MQ=46.08;MQ0=22;MQRankSum=-2.660;QD=6.24;ReadPosRankSum=-4.099;VQSLOD=0.7450;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:43:75.15:0,75,1257	1/1:2,1:4:9.02:212,9,0	0/0:26,0:6:2.88:0,3,16	0/0:35,0:11:19.48:0,19,227	0/0:10,0:10:18.06:0,18,322	0/1:19,0:18:24.74:25,0,100	0/1:38,0:36:99:107,0,167	1/1:30,0:28:66.80:592,67,0	0/0:28,0:28:50.92:0,51,577	0/1:18,0:18:99:125,0,193	0/1:12,0:11:25.94:26,0,141	0/1:21,0:21:25.08:25,0,60	0/0:22,0:22:3.07:0,3,104	0/1:29,0:27:8.83:9,0,116	0/1:20,0:19:8.49:8,0,41	0/1:20,0:20:30.22:30,0,213	1/1:4,18:21:8.98:222,9,0	1/1:23,0:23:3.17:479,3,0	0/1:20,0:19:77.78:78,0,304	0/1:23,0:23:35.48:35,0,48	0/1:30,0:30:62.09:95,0,62	0/1:20,0:20:34.99:50,0,35	1/1:12,0:11:0.78:6,1,0	0/0:28,0:28:18.78:0,19,132	0/1:17,0:17:38.76:39,0,74	0/1:26,0:26:5.73:453,0,6	0/1:13,0:13:5.59:6,0,86	1/1:5,0:5:6.02:193,6,0
chr10	63420038	.	T	TGTGTGTGAGA	1903.50	PASS	AB=1.000;AC=14;AF=0.250;AN=56;BaseQRankSum=-1.087;DP=631;FS=18.846;HRun=0;HaplotypeScore=196.2716;InbreedingCoeff=0.2549;MQ=46.33;MQ0=22;MQRankSum=-4.849;QD=9.86;ReadPosRankSum=-0.546;VQSLOD=1.2655;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:47:81.24:0,81,1599	1/1:4,0:4:6.48:102,6,0	0/0:26,0:6:5.97:0,6,45	0/0:34,0:10:14.72:0,15,265	0/0:11,0:11:18.04:0,18,299	0/1:19,0:18:7.31:7,0,145	0/0:41,0:39:19.38:0,19,314	0/1:30,0:28:49.58:50,0,128	0/0:28,0:28:54.13:0,54,890	0/0:18,0:18:18.97:0,19,329	0/0:12,0:11:16.83:0,17,212	0/1:20,0:20:46.50:46,0,98	0/0:23,0:23:41.57:0,42,362	0/0:28,0:26:4.75:0,5,146	0/0:21,0:20:3.80:0,4,52	0/1:20,0:20:59.58:60,0,226	1/1:24,0:21:6.46:97,6,0	0/1:23,0:23:53.05:53,0,106	0/0:22,0:21:1.80:0,2,427	0/0:23,0:23:10.39:0,10,84	0/0:30,0:30:3.19:0,3,93	0/1:19,0:19:5.87:6,0,155	0/0:13,0:12:8.50:0,8,73	0/0:29,0:29:27.18:0,27,335	0/0:17,0:17:11.02:0,11,177	1/1:4,22:29:56.92:1386,57,0	0/0:14,0:14:7.25:0,7,140	1/1:2,3:5:6.02:257,6,0
chr10	63420045	.	GTA	G	2979.03	PASS	AB=0.975;AC=34;AF=0.607;AN=56;BaseQRankSum=-0.864;DP=637;FS=1.506;HRun=0;HaplotypeScore=132.4661;InbreedingCoeff=-0.0281;MQ=47.16;MQ0=21;MQRankSum=-2.260;QD=5.71;ReadPosRankSum=-4.056;VQSLOD=2.1634;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:51:67.21:0,67,443	1/1:6,0:6:4.90:56,5,0	0/1:31,0:3:1.04:1,0,6	0/1:39,0:9:33.15:33,0,91	0/1:12,0:12:2.06:2,0,74	0/1:19,0:18:12.05:12,0,54	0/1:36,2:36:45.97:149,0,46	1/1:33,0:31:76.42:528,76,0	0/0:31,0:31:65.98:0,66,685	0/1:16,0:16:27.91:142,0,28	0/1:13,0:12:13.28:81,0,13	0/1:18,1:19:19.23:78,0,19	1/1:20,0:20:37.46:247,37,0	0/0:27,1:26:8.57:0,9,59	0/1:21,1:22:19.52:33,0,20	0/1:18,1:19:62.34:62,0,76	1/1:22,0:20:4.87:65,5,0	1/1:20,0:20:41.07:281,41,0	0/1:19,0:18:57.12:138,0,57	1/1:21,2:23:9.84:131,10,0	1/1:30,1:31:22.13:199,22,0	1/1:18,1:19:17.94:130,18,0	0/1:10,0:9:8.28:41,0,8	1/1:31,0:31:42.37:337,42,0	0/1:18,0:18:23.24:61,0,23	1/1:25,0:27:34.65:239,35,0	0/1:12,2:14:28.51:105,0,29	0/0:4,0:4:3.59:0,4,10
chr10	63420052	.	AGT	A	1078.37	PASS	AB=0.769;AC=11;AF=0.196;AN=56;BaseQRankSum=1.049;DP=666;FS=34.758;HRun=0;HaplotypeScore=139.2199;InbreedingCoeff=0.3630;MQ=47.52;MQ0=20;MQRankSum=1.796;QD=6.27;ReadPosRankSum=-0.377;VQSLOD=1.6088;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,108,1689	0/0:7,0:7:12.51:0,13,176	0/0:38,0:3:5.34:0,5,22	0/0:44,0:9:9.01:0,9,133	0/0:15,0:15:35.98:0,36,498	0/0:18,0:17:5.95:0,6,42	0/1:15,23:36:1.36:215,0,1	0/0:35,0:33:74.99:0,75,1019	0/0:30,0:30:66.01:0,66,1055	0/1:12,4:15:33.65:184,0,34	1/1:9,3:12:18.02:188,18,0	0/0:23,0:23:2.55:0,3,11	0/0:23,0:23:35.40:0,35,445	0/0:29,0:27:6:0,6,52	0/0:21,0:21:2.67:0,3,26	0/0:18,0:18:8.99:0,9,96	0/0:25,0:23:24.04:0,24,328	0/0:21,0:21:44.97:0,45,624	0/1:18,4:21:72.33:259,0,72	1/1:9,12:21:8.89:110,9,0	1/1:11,21:32:14.93:187,15,0	0/0:17,0:17:13.86:0,14,195	0/0:15,0:14:14.69:0,15,227	0/0:32,0:32:39.04:0,39,603	0/1:7,9:16:10.73:66,0,11	0/0:28,0:28:46.27:0,46,616	0/1:14,1:15:26.18:26,0,37	0/0:4,0:4:9.02:0,9,126
chr10	63420054	.	T	TGTGTGTGTGTGTGA	4445.33	PASS	AB=0.960;AC=31;AF=0.554;AN=56;BaseQRankSum=0.218;DP=686;FS=30.148;HRun=0;HaplotypeScore=225.4814;InbreedingCoeff=0.2210;MQ=47.71;MQ0=19;MQRankSum=-3.891;QD=9.94;ReadPosRankSum=0.301;VQSLOD=2.5909;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,105,2928	0/1:7,0:7:16.85:17,0,69	0/1:38,0:3:1.81:5,0,2	0/0:46,0:9:10.81:0,11,170	0/0:15,0:15:33.04:0,33,644	1/1:5,12:19:3.48:135,3,0	1/1:38,0:36:21.23:531,21,0	0/1:35,0:33:99:219,0,451	0/0:30,0:30:66.06:0,66,2027	1/1:17,0:16:28.71:541,29,0	1/1:12,0:12:21.07:376,21,0	1/1:2,19:24:5.99:206,6,0	0/0:23,0:23:0.97:0,1,444	1/1:4,23:29:2.78:123,3,0	1/1:5,16:24:3.01:127,3,0	0/1:8,10:18:68.81:199,0,69	0/0:24,0:23:3.76:0,4,162	0/1:21,0:21:79.35:79,0,331	0/1:24,0:23:26.72:583,0,27	1/1:20,0:20:9.50:178,10,0	1/1:31,0:31:13.19:305,13,0	0/0:18,0:18:11.99:0,12,190	0/1:17,0:16:24.55:25,0,131	0/0:33,0:33:37.54:0,38,519	1/1:16,0:16:12.92:204,13,0	0/1:28,0:28:99:290,0,159	1/1:6,10:22:11.76:191,12,0	0/1:4,0:4:31.34:113,0,31
chr10	63421290	.	TTTA	T	8486.08	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-1.511;DP=365;FS=6.714;HRun=0;HaplotypeScore=59.2799;InbreedingCoeff=0.5939;MQ=62.12;MQ0=0;MQRankSum=1.277;QD=24.04;ReadPosRankSum=3.445;VQSLOD=3.6288;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,20:27:39.13:561,39,0	1/1:4,0:4:6.02:85,6,0	0/0:6,0:3:6.02:0,6,113	0/0:6,0:5:8.85:0,9,62	1/1:5,12:17:30.10:414,30,0	1/1:3,19:22:45.15:641,45,0	1/1:3,2:5:6.02:86,6,0	1/1:17,19:36:57.18:797,57,0	1/1:2,7:9:15.05:216,15,0	1/1:3,8:11:24.07:327,24,0	1/1:5,5:10:14.96:179,15,0	1/1:1,5:6:15.05:210,15,0	1/1:5,6:11:15.05:216,15,0	1/1:1,4:5:12.04:166,12,0	1/1:2,10:12:24.08:345,24,0	1/1:1,3:4:9.03:130,9,0	1/1:7,27:34:57.19:820,57,0	1/1:4,17:22:18.59:490,19,0	1/1:11,15:25:45.11:607,45,0	1/1:4,14:18:39.13:534,39,0	1/1:1,2:3:6.02:86,6,0	1/1:3,4:7:6.02:86,6,0	1/1:3,4:7:9.03:115,9,0	1/1:2,2:4:6.02:86,6,0	1/1:3,15:18:33.11:475,33,0	1/1:4,6:10:18.06:253,18,0	1/1:3,13:16:33.11:475,33,0	1/1:5,4:9:6.02:86,6,0
chr10	63421821	.	TTTAC	T	1187.75	PASS	AB=0.794;AC=8;AF=0.143;AN=56;BaseQRankSum=0.910;DP=386;FS=5.334;HRun=0;HaplotypeScore=63.0745;InbreedingCoeff=0.6534;MQ=58.12;MQ0=1;MQRankSum=-0.772;QD=14.85;ReadPosRankSum=0.480;VQSLOD=2.1432;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:91.33:0,91,1747	1/1:0,6:6:14.91:254,15,0	0/0:6,0:5:11.99:0,12,106	0/0:4,0:4:5.93:0,6,49	0/0:26,0:26:62.90:0,63,1018	0/0:16,0:16:30.03:0,30,498	0/0:7,0:7:17.98:0,18,343	1/1:26,0:26:18.52:419,19,0	0/0:16,0:16:45.12:0,45,1020	0/0:17,0:17:30.04:0,30,371	0/0:11,0:11:27.04:0,27,569	0/0:14,0:14:35.99:0,36,447	0/0:15,0:15:29.99:0,30,396	0/0:8,0:8:21.02:0,21,373	0/0:11,0:11:30.08:0,30,649	0/0:14,0:14:36.03:0,36,596	1/1:1,15:16:18.06:305,18,0	0/1:6,14:20:29.67:308,0,30	0/0:16,0:13:35.97:0,36,574	0/0:24,0:24:63.11:0,63,1216	0/0:7,0:7:21.01:0,21,324	0/0:5,0:5:15:0,15,221	0/0:7,0:7:20.95:0,21,313	0/0:4,0:4:12:0,12,197	0/0:15,0:15:36.08:0,36,749	0/0:10,0:10:27.03:0,27,317	0/0:19,0:19:42.10:0,42,870	0/1:12,0:12:51.41:51,0,204
chr10	63421989	.	CTATT	C	2568.59	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=10.021;DP=566;FS=3.321;HRun=0;HaplotypeScore=89.8244;InbreedingCoeff=0.9964;MQ=70.75;MQ0=0;MQRankSum=-2.200;QD=39.52;ReadPosRankSum=0.891;VQSLOD=3.8814;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:36:99:0,102,2656	1/1:0,6:6:18.06:330,18,0	0/0:10,0:10:27.09:0,27,568	0/0:14,0:14:24.53:0,25,431	0/0:27,0:27:72.24:0,72,1825	0/0:22,0:22:63.21:0,63,1569	0/0:18,0:18:51.16:0,51,1242	1/1:3,20:23:57.16:945,57,0	0/0:20,0:20:57.20:0,57,1471	0/0:30,0:30:81.28:0,81,2058	0/0:20,0:20:60.20:0,60,1418	0/0:18,0:18:54.13:0,54,1322	0/0:17,0:17:48.16:0,48,1235	0/0:19,0:19:54.18:0,54,1417	0/0:29,0:28:84.28:0,84,2167	0/0:20,0:20:54.18:0,54,1368	1/1:0,21:21:48.12:846,48,0	1/1:0,15:15:33.11:607,33,0	0/0:31,0:30:90.31:0,90,2218	0/0:14,0:14:39.13:0,39,1030	0/0:20,0:20:60.21:0,60,1584	0/0:12,0:12:30.05:0,30,678	0/0:23,0:23:66.21:0,66,1688	0/0:20,0:20:60.21:0,60,1477	0/0:17,0:17:51.13:0,51,1240	0/0:23,0:23:69.23:0,69,1737	0/0:26,0:26:72.23:0,72,1845	0/0:14,0:14:27.09:0,27,713
chr10	63422436	.	C	CAACAAT	974.17	PASS	AB=1.000;AC=4;AF=0.071;AN=56;BaseQRankSum=-1.961;DP=562;FS=2.003;HRun=0;HaplotypeScore=144.0157;InbreedingCoeff=0.4180;MQ=55.18;MQ0=18;MQRankSum=-3.587;QD=10.82;ReadPosRankSum=-0.167;VQSLOD=2.8274;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:26:14.64:15,0,259	0/0:8,0:8:9.79:0,10,68	0/0:20,0:14:27.01:0,27,249	0/0:17,0:13:33.06:0,33,342	0/1:27,0:27:99:168,0,234	0/0:23,0:23:38.66:0,39,307	0/0:18,0:18:46.52:0,47,341	0/0:21,0:19:47.87:0,48,400	1/1:2,31:34:27.09:906,27,0	0/0:20,0:17:31.62:0,32,267	0/0:8,0:8:23.27:0,23,140	0/0:8,0:8:23.89:0,24,271	0/0:23,0:23:35.67:0,36,457	0/0:26,0:26:33.02:0,33,397	0/0:24,0:24:29.73:0,30,291	0/0:32,0:32:53.82:0,54,566	0/0:27,0:27:43.40:0,43,297	0/0:12,0:12:22.53:0,23,139	0/0:10,0:8:23.75:0,24,172	0/0:30,0:30:35.78:0,36,342	0/0:18,0:16:22.88:0,23,214	0/0:19,0:18:20.78:0,21,189	0/0:18,0:18:26.50:0,27,171	0/0:14,0:14:29.21:0,29,198	0/0:25,0:25:20.29:0,20,150	0/0:15,0:14:29.11:0,29,290	0/0:31,0:31:47.34:0,47,601	0/0:5,0:3:5.98:0,6,46
chr10	63422456	.	ACAACAACAACAACAACAACAG	A	6537.64	PASS	AB=0.966;AC=25;AF=0.446;AN=56;BaseQRankSum=7.704;DP=630;FS=2.535;HRun=0;HaplotypeScore=266.6536;InbreedingCoeff=-0.2911;MQ=53.79;MQ0=26;MQRankSum=2.401;QD=13.85;ReadPosRankSum=1.653;VQSLOD=3.3361;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:30:75.45:0,75,3395	1/1:2,4:6:1.89:159,2,0	0/0:18,0:10:21.37:0,21,176	0/0:20,0:10:11.14:0,11,124	0/0:30,0:30:79.37:0,79,3457	0/1:21,1:22:63.57:341,0,64	0/1:17,0:17:56.12:56,0,173	1/1:14,0:12:17.07:205,17,0	0/0:29,0:29:39.09:0,39,2424	0/1:29,0:26:99:342,0,165	0/1:16,1:16:35.32:320,0,35	0/1:16,2:18:32.94:532,0,33	0/1:25,0:25:27.94:710,0,28	0/1:32,0:32:27.32:551,0,27	0/1:29,0:29:99:256,0,133	0/1:32,0:32:99:518,0,175	1/1:10,16:26:3.24:186,3,0	0/1:5,8:13:89.60:108,0,90	0/1:13,0:8:53.89:54,0,364	0/1:33,0:33:37.78:706,0,38	0/1:21,0:19:26.69:27,0,435	1/1:22,0:21:41.01:262,41,0	0/1:27,0:27:44.60:151,0,45	0/1:18,0:18:8.97:72,0,9	0/1:26,0:26:82.51:83,0,150	0/0:22,0:21:57.15:0,57,1974	0/1:32,0:32:51.10:897,0,51	0/0:6,0:4:9.01:0,9,304
chr10	63422459	.	ACAACAACAACAACAACAG	A	10177.05	PASS	AB=0.882;AC=38;AF=0.679;AN=56;BaseQRankSum=4.683;DP=647;FS=2.044;HRun=0;HaplotypeScore=235.7474;InbreedingCoeff=0.5948;MQ=54.86;MQ0=27;MQRankSum=0.081;QD=21.20;ReadPosRankSum=1.872;VQSLOD=3.5362;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:31:75.30:0,75,2901	1/1:6,0:6:2.12:120,2,0	0/0:23,0:10:21.29:0,21,172	0/0:21,0:11:21.98:0,22,218	0/0:31,0:31:75.68:0,76,2909	1/1:7,14:21:9.03:431,9,0	1/1:18,0:18:26.89:262,27,0	1/1:14,0:12:20.81:191,21,0	0/0:30,0:30:42.07:0,42,2078	1/1:7,23:27:27.27:542,27,0	1/1:18,0:17:34.73:412,35,0	1/1:19,1:20:50.82:741,51,0	1/1:3,20:23:24.01:1199,24,0	1/1:4,27:31:17.87:899,18,0	1/1:6,23:29:9.03:450,9,0	1/1:8,24:32:17.05:898,17,0	1/1:24,0:24:5.98:151,6,0	0/1:14,0:14:62.26:78,0,62	0/1:15,0:10:99:154,0,182	1/1:5,30:35:64.02:1083,64,0	0/1:19,0:18:63.25:143,0,63	1/1:24,0:23:43.59:317,44,0	1/1:4,24:28:10.90:224,11,0	1/1:20,0:20:23.92:241,24,0	0/1:3,24:27:87.25:144,0,87	0/0:22,0:21:54.12:0,54,1446	1/1:4,28:32:28.96:1496,29,0	0/0:6,0:4:9.01:0,9,241
chr10	63422462	.	ACAACAACAACAACAG	A	8782.49	PASS	AB=1.000;AC=39;AF=0.696;AN=56;BaseQRankSum=5.599;DP=652;FS=2.028;HRun=0;HaplotypeScore=216.2987;InbreedingCoeff=0.6748;MQ=54.80;MQ0=27;MQRankSum=0.602;QD=18.37;ReadPosRankSum=2.012;VQSLOD=3.7221;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:30:77.79:0,78,2384	1/1:6,0:6:2.63:100,3,0	0/0:26,0:9:20.81:0,21,172	0/0:21,0:13:27.73:0,28,289	0/0:31,0:31:78.26:0,78,2438	1/1:21,0:21:9.03:332,9,0	1/1:17,0:17:32.48:255,32,0	1/1:15,0:13:29.27:277,29,0	0/0:31,0:31:51.06:0,51,1811	1/1:29,0:26:50.14:516,50,0	1/1:19,0:18:39.03:397,39,0	1/1:22,0:22:56.76:703,57,0	1/1:23,0:23:24.01:885,24,0	1/1:31,0:31:17.57:663,18,0	1/1:29,0:29:9.03:332,9,0	1/1:32,0:32:17.77:663,18,0	1/1:22,0:22:5.21:129,5,0	0/1:14,0:14:32.50:58,0,33	0/1:18,0:13:99:202,0,155	1/1:34,0:34:66.12:891,66,0	1/1:17,0:16:35.82:345,36,0	1/1:3,20:22:43.84:374,44,0	1/1:28,0:28:14.60:190,15,0	1/1:20,0:20:31.49:261,31,0	0/1:27,0:27:48.61:105,0,49	0/0:23,0:22:57.12:0,57,1115	1/1:31,0:31:29.02:1105,29,0	0/0:7,0:5:12:0,12,185
chr10	63423809	.	T	TA	646.02	PASS	AB=1.000;AC=6;AF=0.107;AN=56;BaseQRankSum=-4.282;DP=388;FS=11.776;HRun=11;HaplotypeScore=41.1908;InbreedingCoeff=0.6273;MQ=56.71;MQ0=4;MQRankSum=2.726;QD=10.25;ReadPosRankSum=-0.217;VQSLOD=0.8570;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:19:38.80:0,39,302	0/0:8,0:8:20.92:0,21,163	0/0:12,0:9:5.55:0,6,33	0/1:5,0:3:0:0,0,0	0/0:17,0:17:47.77:0,48,364	0/0:23,0:22:44.78:0,45,348	0/0:10,0:10:26.88:0,27,206	0/1:21,0:19:34.47:34,0,210	0/0:8,0:7:11.93:0,12,93	0/0:15,0:16:37.87:0,38,283	0/0:10,1:11:2.42:0,2,200	0/0:11,0:10:23.83:0,24,177	0/0:8,0:8:14.91:0,15,116	0/0:9,0:9:23.91:0,24,186	0/0:14,0:14:29.86:0,30,232	0/0:12,0:10:20.91:0,21,162	0/0:17,0:17:44.76:0,45,341	0/0:12,0:12:29.88:0,30,232	0/0:17,1:18:11.36:0,11,268	0/0:15,0:15:38.84:0,39,302	0/0:9,0:9:23.91:0,24,186	0/0:7,0:7:14.93:0,15,116	0/0:14,0:14:32.86:0,33,255	0/0:8,0:7:20.92:0,21,163	0/0:20,2:23:13.52:0,14,355	1/1:3,16:18:24.85:423,25,0	0/0:21,0:21:53.79:0,54,418	1/1:5,12:16:14.04:313,14,0
chr10	63423898	.	TTGTG	T	108.73	PASS	AB=0.929;AC=7;AF=0.135;AN=52;BaseQRankSum=-1.402;DP=358;FS=19.070;HRun=0;HaplotypeScore=86.6476;InbreedingCoeff=0.5139;MQ=57.00;MQ0=5;MQRankSum=-0.156;QD=2.94;ReadPosRankSum=1.540;VQSLOD=0.1957;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:16:9.03:0,9,149	0/0:10,0:11:12.03:0,12,181	./.	./.	0/0:22,0:22:15.02:0,15,204	0/0:15,0:15:13.56:0,14,153	0/1:12,1:12:36.22:36,0,108	0/0:18,0:17:15.03:0,15,171	0/0:6,0:7:12.04:0,12,256	0/0:20,0:20:27.02:0,27,298	0/0:21,0:23:29.41:0,29,410	0/0:7,0:7:6.02:0,6,105	1/1:5,0:5:3:27,3,0	0/0:11,0:11:11.93:0,12,109	0/0:8,0:9:6:0,6,77	0/0:7,0:7:7.57:0,8,79	0/0:9,0:9:12.02:0,12,199	0/0:7,0:6:9.03:0,9,149	0/0:13,0:14:15.04:0,15,224	0/0:10,0:10:9.02:0,9,113	0/0:11,0:11:15.04:0,15,193	0/0:3,11:13:0:0,0,0	1/1:6,0:6:2.98:21,3,0	1/1:5,6:12:9.03:144,9,0	0/0:13,0:15:18.06:0,18,304	0/0:25,0:24:39.12:0,39,638	0/0:12,0:14:23.01:0,23,244	0/0:12,0:12:12.04:0,12,180
chr10	63425893	.	TTGTG	T	2155.12	PASS	AB=0.735;AC=29;AF=0.604;AN=48;BaseQRankSum=2.500;DP=524;FS=0.803;HRun=0;HaplotypeScore=88.3621;InbreedingCoeff=0.4906;MQ=61.89;MQ0=15;MQRankSum=-0.836;QD=7.48;ReadPosRankSum=-0.716;VQSLOD=2.3545;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:6.02:0,6,114	1/1:4,0:3:2.94:18,3,0	./.	./.	0/0:17,0:17:12.04:0,12,242	1/1:20,0:20:3.01:36,3,0	0/1:17,5:24:3.15:220,0,3	0/0:17,0:15:6.02:0,6,69	./.	1/1:12,2:14:6.02:91,6,0	1/1:4,0:4:2.99:24,3,0	1/1:13,15:28:17.93:222,18,0	1/1:13,8:21:12.04:186,12,0	1/1:7,8:14:6.02:93,6,0	1/1:14,4:18:3.01:46,3,0	1/1:7,10:18:17.72:260,18,0	0/1:10,14:24:36.90:301,0,37	1/1:12,7:18:12.04:186,12,0	0/0:30,0:28:2.98:0,3,22	0/0:23,0:23:24.08:0,24,499	0/0:36,0:36:32.83:0,33,650	0/0:8,2:9:0:0,0,0	./.	1/1:14,17:30:27.09:418,27,0	0/1:9,2:12:3.45:84,0,3	1/1:13,4:17:5.54:58,6,0	0/0:16,0:17:15:0,15,236	1/1:19,0:19:6:71,6,0
chr10	63426040	.	TTGTGTGTGTGTGTG	T	5065.55	PASS	AC=26;AF=0.520;AN=50;BaseQRankSum=4.100;DP=455;FS=5.848;HRun=0;HaplotypeScore=138.4453;InbreedingCoeff=0.7968;MQ=61.94;MQ0=27;MQRankSum=-5.574;QD=24.59;ReadPosRankSum=2.440;VQSLOD=3.6151;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:2,0:6:6.02:0,6,112	./.	0/0:42,0:12:6.02:0,6,276	./.	1/1:6,2:9:8.73:334,9,0	1/1:18,3:19:5.99:139,6,0	0/0:18,0:13:18.06:0,18,551	0/0:6,0:13:12.04:0,12,473	1/1:13,4:16:1.67:229,2,0	1/1:6,7:13:15:493,15,0	1/1:10,9:18:12.04:473,12,0	0/0:10,0:10:15.05:0,15,857	1/1:6,5:9:15.05:591,15,0	1/1:5,6:11:9.03:355,9,0	1/1:3,11:14:12.04:473,12,0	0/0:10,0:16:18.06:0,18,476	0/0:18,0:24:9.03:0,9,301	1/1:12,0:9:3.01:40,3,0	1/1:6,9:15:13.91:491,14,0	1/1:32,0:29:9.01:165,9,0	0/0:4,0:12:14.08:0,14,722	0/0:6,0:8:12.02:0,12,530	0/0:22,0:28:36.12:0,36,2129	1/1:9,14:23:30.10:1182,30,0	0/0:17,0:20:48.16:0,48,2631	1/1:9,0:9:6.02:100,6,0	0/0:3,0:7:8.99:0,9,391
chr10	63428413	.	GTGTGTGCATGTAACCA	G	11366.82	PASS	AB=0.985;AC=14;AF=0.250;AN=56;BaseQRankSum=13.283;DP=740;FS=1.878;HRun=0;HaplotypeScore=318.3483;InbreedingCoeff=0.8064;MQ=62.52;MQ0=4;MQRankSum=-13.312;QD=64.95;ReadPosRankSum=3.607;VQSLOD=4.1261;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,7:17:33.03:1131,33,0	0/0:14,0:14:39.12:0,39,2467	0/0:37,0:28:71.89:0,72,4119	0/0:28,0:19:43.19:0,43,2308	1/1:4,23:27:69.13:2760,69,0	0/0:21,0:21:63.20:0,63,4362	0/0:31,0:31:93.32:0,93,6184	0/0:30,0:30:69.20:0,69,3199	0/0:25,0:25:63.22:0,63,4590	0/0:47,0:47:99:0,117,8247	0/0:30,0:30:87.26:0,87,5821	0/0:29,0:29:84.26:0,84,5737	1/1:6,23:29:60.21:2752,60,0	0/0:25,0:25:75.24:0,75,5193	0/0:27,0:27:78.27:0,78,5841	0/0:24,0:24:72.23:0,72,4941	0/0:27,0:27:72.25:0,72,5244	0/0:25,0:25:67.10:0,67,4465	0/0:20,0:20:48.16:0,48,2662	0/0:43,0:43:99:0,123,8427	0/0:25,0:25:60.21:0,60,3873	1/1:2,17:19:39.13:1783,39,0	1/1:3,21:24:47.93:2130,48,0	1/1:2,15:17:15.05:687,15,0	0/0:21,0:21:48.16:0,48,3464	0/1:32,1:33:96.41:96,0,4923	0/0:36,0:36:99:0,99,6472	0/1:9,0:9:26.94:27,0,596
chr10	63428424	.	TA	T	594.13	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=15.013;DP=728;FS=3.170;HRun=2;HaplotypeScore=138.7998;InbreedingCoeff=0.9812;MQ=66.66;MQ0=4;MQRankSum=-13.853;QD=5.17;ReadPosRankSum=3.267;VQSLOD=0.9713;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,5:13:24.92:113,25,0	0/0:14,0:14:39.10:0,39,561	0/0:42,0:34:96.71:0,97,1350	0/0:30,0:21:29.55:0,30,666	1/1:23,1:24:45.97:189,46,0	0/0:26,0:26:78.23:0,78,1128	0/0:37,0:37:99:0,105,1549	0/0:29,0:29:87.28:0,87,1269	0/0:27,0:27:75.25:0,75,1124	0/0:42,0:42:99:0,126,1888	0/0:30,0:30:90.29:0,90,1329	0/0:30,0:30:90.30:0,90,1348	1/1:24,0:24:45.19:162,45,0	0/0:24,0:24:72.21:0,72,1038	0/0:28,0:28:84.28:0,84,1259	0/0:27,0:27:78.26:0,78,1151	0/0:28,0:28:78.26:0,78,1169	0/0:22,0:23:61.12:0,61,934	0/0:21,0:21:63.20:0,63,918	0/0:45,0:45:99:0,126,1874	0/0:23,0:23:63.21:0,63,942	1/1:18,0:18:28.43:111,28,0	1/1:21,0:21:36.01:143,36,0	1/1:15,0:15:11.89:61,12,0	0/0:18,0:18:51.17:0,51,764	0/0:28,0:28:76.50:0,77,1207	0/0:38,0:38:99:0,105,1552	0/0:3,0:3:9.03:0,9,135
chr10	63428489	.	A	AG	3684.01	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-1.689;DP=724;FS=11.053;HRun=1;HaplotypeScore=125.5906;InbreedingCoeff=0.9637;MQ=75.49;MQ0=0;MQRankSum=-2.535;QD=38.78;ReadPosRankSum=0.232;VQSLOD=1.8709;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,37:38:99:1572,105,0	0/0:15,0:15:42.14:0,42,545	0/0:24,0:24:66.20:0,66,840	0/0:28,0:28:52.21:0,52,880	1/1:3,29:32:81.27:1213,81,0	0/0:26,0:26:78.24:0,78,999	0/0:34,0:34:99:0,99,1271	0/0:31,0:31:90.27:0,90,1133	1/1:1,23:24:60.20:899,60,0	0/0:31,0:31:87.27:0,87,1109	0/0:23,0:23:63.20:0,63,818	0/0:29,0:29:83.91:0,84,1090	0/0:23,0:23:60.20:0,60,778	0/0:19,0:19:57.19:0,57,740	0/0:30,0:30:90.29:0,90,1169	0/0:28,0:28:84.27:0,84,1091	0/0:19,0:19:57.19:0,57,740	0/0:18,0:18:48.14:0,48,606	0/0:15,0:15:45.13:0,45,559	0/0:34,0:34:96.30:0,96,1231	0/0:55,0:54:99:0,157,2026	0/0:18,0:18:51.15:0,51,646	0/0:26,0:26:57.18:0,57,740	0/0:29,0:29:69.21:0,69,881	0/0:18,0:18:54.18:0,54,701	0/0:24,0:24:69.20:0,69,860	0/0:29,0:29:84.27:0,84,1091	0/0:3,0:2:6.02:0,6,78
chr10	63428796	.	A	AAAAAC	2152.22	PASS	AB=1.000;AC=10;AF=0.179;AN=56;BaseQRankSum=-2.687;DP=636;FS=3.127;HRun=0;HaplotypeScore=240.9104;InbreedingCoeff=0.5512;MQ=56.20;MQ0=3;MQRankSum=-2.903;QD=13.98;ReadPosRankSum=-2.228;VQSLOD=2.9267;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:74.84:0,75,1337	0/0:12,0:12:29.76:0,30,305	0/0:26,0:24:37.87:0,38,573	0/0:23,0:15:18.06:0,18,306	0/0:41,0:41:81.27:0,81,1463	0/0:16,0:15:29.51:0,30,302	0/1:20,0:20:8.32:8,0,271	0/0:23,0:22:33.08:0,33,438	1/1:10,24:34:66.22:1876,66,0	0/1:21,0:23:0.10:0,0,474	0/0:19,0:19:20.86:0,21,242	0/0:21,0:21:40.29:0,40,414	0/0:25,0:25:60.19:0,60,1078	0/0:25,0:25:21.94:0,22,492	0/0:30,0:31:14.13:0,14,475	0/0:24,0:25:33.46:0,33,564	0/0:18,0:18:6.13:0,6,303	0/0:26,0:26:41.83:0,42,527	0/1:24,0:23:3.09:3,0,227	0/0:23,0:24:22.86:0,23,410	0/0:11,0:11:6.08:0,6,70	0/0:26,0:26:63.13:0,63,1097	0/0:23,0:23:47.91:0,48,851	0/0:19,0:19:41.99:0,42,785	0/1:18,0:18:37.23:37,0,286	1/1:28,0:28:23.99:271,24,0	0/0:18,0:18:29.89:0,30,347	1/1:7,0:7:17.62:107,18,0
chr10	63428806	.	CAAAACAA	C	14027.25	PASS	AB=1.000;AC=27;AF=0.482;AN=56;BaseQRankSum=8.684;DP=655;FS=1.745;HRun=0;HaplotypeScore=237.2789;InbreedingCoeff=0.9130;MQ=54.47;MQ0=3;MQRankSum=-10.013;QD=46.76;ReadPosRankSum=1.433;VQSLOD=4.6813;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:29:84.20:0,84,3159	0/0:12,0:12:30.10:0,30,1193	0/0:29,0:26:66.22:0,66,1947	0/0:24,0:16:41.30:0,41,1177	0/0:40,0:40:93.30:0,93,3467	1/1:7,9:15:15.28:754,15,0	1/1:10,13:23:29.47:1089,29,0	0/0:27,0:26:52.27:0,52,1956	0/0:33,0:33:75.26:0,75,2597	1/1:9,13:22:42.13:1307,42,0	1/1:5,9:14:39.05:741,39,0	1/1:9,14:23:57.06:1264,57,0	0/0:26,0:26:78.27:0,78,2753	1/1:6,15:21:63.15:1393,63,0	1/1:18,15:33:65.47:1654,65,0	1/1:11,15:26:66.14:1561,66,0	0/0:19,0:19:14.03:0,14,1144	0/0:27,0:27:60.14:0,60,2008	1/1:16,7:22:25.20:822,25,0	1/1:10,13:23:38.98:1223,39,0	1/1:6,4:10:8.59:245,9,0	0/0:31,0:31:90.31:0,90,3143	0/0:27,0:27:75.24:0,75,2449	0/0:23,0:24:63.22:0,63,2112	1/1:9,9:18:35.86:1093,36,0	0/1:31,0:31:43.37:43,0,2063	1/1:7,10:17:18.37:837,18,0	0/0:7,0:7:21.07:0,21,556
chr10	63428808	.	A	AC	5903.80	PASS	AB=0.889;AC=25;AF=0.446;AN=56;BaseQRankSum=10.706;DP=655;FS=4.743;HRun=0;HaplotypeScore=201.5483;InbreedingCoeff=0.7689;MQ=53.84;MQ0=3;MQRankSum=-11.213;QD=20.22;ReadPosRankSum=1.609;VQSLOD=4.8540;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:77.77:0,78,1126	0/0:11,0:11:30.10:0,30,418	0/0:31,0:27:62.51:0,63,752	0/0:28,0:18:10.41:0,10,508	0/0:39,0:39:93.29:0,93,1263	1/1:13,2:14:10.64:260,11,0	1/1:19,3:22:20.40:374,20,0	0/0:27,0:26:72.22:0,72,976	0/0:33,0:33:72.81:0,73,578	1/1:20,2:22:38.78:461,39,0	1/1:9,5:14:35.72:400,36,0	1/1:19,3:22:52.74:517,53,0	0/0:28,0:28:81.25:0,81,1101	1/1:18,3:21:59.45:584,59,0	1/1:24,7:31:23.61:769,24,0	1/1:19,6:25:65.17:713,65,0	0/0:18,0:18:36.08:0,36,481	0/0:27,0:27:60.14:0,60,795	1/1:18,4:21:42.37:445,42,0	1/1:19,3:22:34.80:518,35,0	0/1:8,2:10:27.09:105,0,27	0/0:32,0:32:90.30:0,90,1256	0/0:27,0:27:75.23:0,75,1016	0/0:25,0:25:63.19:0,63,847	1/1:14,4:18:19.06:427,19,0	0/1:29,2:31:49.02:49,0,435	0/1:15,2:17:35.16:282,0,35	0/0:8,0:8:20.31:0,20,156
chr10	63428820	.	AAC	A	6052.47	PASS	AB=0.765;AC=24;AF=0.429;AN=56;BaseQRankSum=13.760;DP=656;FS=10.914;HRun=0;HaplotypeScore=209.9188;InbreedingCoeff=0.7111;MQ=57.10;MQ0=3;MQRankSum=-11.274;QD=20.87;ReadPosRankSum=1.575;VQSLOD=3.9139;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:78.07:0,78,434	0/0:12,0:12:30.03:0,30,300	0/0:30,0:26:62.70:0,63,774	0/0:32,0:22:32.02:0,32,650	0/0:36,0:36:88.32:0,88,455	1/1:5,9:14:14.91:353,15,0	0/1:14,13:27:66.02:448,0,66	0/1:24,1:24:74.54:75,0,207	0/0:37,0:37:90.22:0,90,1400	1/1:13,12:25:11.69:560,12,0	1/1:1,9:10:26.57:343,27,0	1/1:10,14:24:34.59:585,35,0	0/0:30,0:30:90.14:0,90,1426	1/1:4,14:18:37.10:597,37,0	0/1:14,15:29:0.52:575,0,1	1/1:9,14:23:22.72:648,23,0	0/0:14,0:14:15.63:0,16,187	0/0:22,0:22:39.86:0,40,424	1/1:16,6:21:12.33:362,12,0	1/1:9,13:22:3.05:519,3,0	0/1:9,4:13:1.58:145,0,2	0/0:30,0:30:84.22:0,84,1363	0/0:28,0:28:77.81:0,78,1257	0/0:27,0:27:72.21:0,72,1188	1/1:12,8:20:13.26:383,13,0	0/0:29,0:29:13.70:0,14,289	1/1:8,10:18:22.20:460,22,0	0/0:10,0:10:4.60:0,5,49
chr10	63428821	.	AC	A	2218.63	PASS	AB=0.975;AC=18;AF=0.321;AN=56;BaseQRankSum=12.386;DP=648;FS=5.911;HRun=1;HaplotypeScore=206.8468;InbreedingCoeff=-0.1258;MQ=57.33;MQ0=3;MQRankSum=-8.225;QD=6.34;ReadPosRankSum=6.211;VQSLOD=0.7224;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:30:58.58:59,0,59	0/0:12,0:12:29.40:0,29,192	0/0:28,0:24:62.87:0,63,681	0/0:31,1:22:26.13:0,26,540	0/1:37,0:37:5.25:87,0,5	0/1:14,0:14:31.27:126,0,31	0/1:26,0:26:99:129,0,132	0/1:22,2:23:41.03:41,0,187	0/0:36,0:36:84.48:0,84,1125	0/1:24,1:25:72.82:222,0,73	1/1:10,0:10:12.90:127,13,0	0/1:24,0:24:38.83:175,0,39	0/0:30,0:30:90.13:0,90,1144	1/1:17,1:18:3.69:249,4,0	0/1:27,1:28:71.43:232,0,71	0/1:21,1:22:3.71:258,0,4	0/0:15,0:15:19.78:0,20,137	0/0:22,0:22:44.11:0,44,292	0/1:21,1:21:36.43:140,0,36	0/1:21,0:21:27.08:169,0,27	0/1:14,0:14:30.68:31,0,80	0/0:28,0:28:84.22:0,84,1090	0/0:27,0:27:77.86:0,78,1007	0/0:27,0:27:72.11:0,72,937	0/1:15,1:16:30.61:156,0,31	0/0:31,0:31:56.39:0,56,434	0/1:18,1:19:30.14:185,0,30	0/0:10,0:10:25.67:0,26,131
chr10	63428822	.	C	CA	7983.72	PASS	AB=1.000;AC=39;AF=0.696;AN=56;BaseQRankSum=8.848;DP=659;FS=0.325;HRun=9;HaplotypeScore=193.3375;InbreedingCoeff=0.9244;MQ=57.50;MQ0=3;MQRankSum=-10.802;QD=19.15;ReadPosRankSum=-0.790;VQSLOD=2.6735;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:30:30.44:0,30,107	1/1:1,0:12:22.66:121,23,0	0/0:28,0:24:33.95:0,34,306	0/1:31,0:21:7.54:8,0,287	0/0:3,0:37:48.36:0,48,152	1/1:12,3:15:36.07:364,36,0	1/1:17,9:27:44.29:649,44,0	1/1:9,0:25:38.27:308,38,0	0/0:36,0:36:79.03:0,79,645	1/1:17,9:26:39.30:611,39,0	1/1:10,0:10:27.05:266,27,0	1/1:14,10:24:60.57:605,61,0	0/0:30,0:30:80.96:0,81,699	1/1:15,5:20:49.96:493,50,0	1/1:19,7:27:45.58:633,46,0	1/1:19,3:22:27.11:476,27,0	1/1:4,1:16:14.38:73,14,0	1/1:7,0:23:28.65:145,29,0	1/1:10,11:20:40.62:435,41,0	1/1:15,8:24:32.20:503,32,0	1/1:6,10:16:37.33:387,37,0	0/0:27,0:27:77.98:0,78,676	0/0:27,0:27:68.98:0,69,599	0/0:27,0:27:68.98:0,69,598	1/1:10,6:16:37.97:395,38,0	1/1:8,24:32:72.14:736,72,0	1/1:11,8:19:50.59:494,51,0	1/1:0,10:10:27.06:284,27,0
chr10	63429043	.	AGCCTAGATCAGGTGGGCTGGATTAAGGGATG	A	7104.81	PASS	AB=1.000;AC=35;AF=0.625;AN=56;BaseQRankSum=-3.446;DP=685;FS=11.090;HRun=0;HaplotypeScore=506.9967;InbreedingCoeff=0.5864;MQ=81.17;MQ0=5;MQRankSum=-0.363;QD=14.35;ReadPosRankSum=6.440;VQSLOD=0.4695;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:47,0:47:99:361,0,1106	0/1:7,0:7:30.34:40,0,30	0/0:27,0:26:4.49:0,4,166	0/0:28,0:27:17.67:0,18,232	1/1:30,0:30:49.27:529,49,0	1/1:19,0:19:35.70:266,36,0	1/1:22,0:22:44.96:379,45,0	1/1:21,0:21:20.99:185,21,0	0/1:36,0:36:99:498,0,389	1/1:19,0:18:29.96:262,30,0	1/1:4,12:16:14.60:84,15,0	1/1:28,0:27:56.86:461,57,0	0/0:23,0:23:51.06:0,51,1534	1/1:21,0:20:46.64:414,47,0	1/1:30,0:30:62.89:515,63,0	1/1:19,0:18:41.89:341,42,0	0/1:28,0:28:99:354,0,756	0/1:31,0:31:99:447,0,117	1/1:18,0:18:18:160,18,0	1/1:23,0:23:47.84:381,48,0	1/1:45,0:42:90.89:737,91,0	0/0:21,0:21:48.01:0,48,658	0/0:25,0:25:47.97:0,48,668	0/0:34,0:34:80.98:0,81,1447	1/1:23,0:23:56.83:461,57,0	0/0:27,0:27:42.17:0,42,566	1/1:12,0:12:26.91:235,27,0	0/0:5,0:5:11.91:0,12,90
chr10	63433646	.	G	GTACATACATACA	13962.15	PASS	AB=1.000;AC=47;AF=0.839;AN=56;BaseQRankSum=-7.795;DP=612;FS=10.976;HRun=0;HaplotypeScore=238.9549;InbreedingCoeff=0.0189;MQ=48.12;MQ0=1;MQRankSum=-6.283;QD=23.35;ReadPosRankSum=-1.427;VQSLOD=2.5459;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:15,6:24:9.03:499,9,0	0/1:8,0:8:2.61:19,0,3	0/0:14,0:8:2.98:0,3,21	0/1:13,0:8:11.64:12,0,68	1/1:22,12:35:9.03:521,9,0	1/1:19,0:19:21.07:391,21,0	0/1:17,0:17:15.62:105,0,16	0/1:40,0:40:22.68:212,0,23	1/1:31,0:31:39.13:1936,39,0	1/1:24,0:25:51.17:1018,51,0	1/1:24,0:24:12.04:220,12,0	1/1:20,0:20:24.08:446,24,0	1/1:10,9:21:21.96:1224,22,0	0/1:17,0:17:3.60:314,0,4	1/1:17,0:17:18.06:334,18,0	1/1:16,0:16:21.07:388,21,0	0/1:34,0:34:11.18:11,0,60	0/1:21,0:21:9.24:9,0,277	1/1:19,0:18:18.05:330,18,0	1/1:23,0:23:7.21:268,7,0	1/1:7,0:7:5.99:111,6,0	1/1:12,10:22:14.89:875,15,0	1/1:15,8:23:9.03:525,9,0	1/1:9,3:12:6.02:350,6,0	1/1:21,0:21:5.67:462,6,0	1/1:19,17:40:63.62:2002,64,0	1/1:34,0:34:57.20:1053,57,0	1/1:8,2:14:6.02:326,6,0
chr10	63433674	.	AT	A	445.80	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-6.247;DP=574;FS=0.809;HRun=8;HaplotypeScore=195.5526;InbreedingCoeff=0.6975;MQ=54.84;MQ0=3;MQRankSum=3.680;QD=7.82;ReadPosRankSum=-1.414;VQSLOD=-0.2084;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:31.86:0,32,283	0/0:7,0:7:13.28:0,13,55	0/0:15,0:7:13.57:0,14,117	0/0:10,0:7:3.48:0,3,30	0/0:28,0:28:40.44:0,40,371	0/0:21,0:21:10.28:0,10,27	0/0:10,0:10:5.36:0,5,14	0/0:34,0:34:54.59:0,55,214	0/0:32,0:32:52.53:0,53,266	1/1:30,0:30:15.79:262,16,0	0/0:26,0:26:34.10:0,34,98	0/0:18,0:18:11.16:0,11,29	0/0:25,0:25:47.97:0,48,460	0/0:15,0:15:10.28:0,10,27	0/0:14,0:14:7.35:0,7,18	0/0:15,0:14:6.20:0,6,15	0/0:27,0:27:53.57:0,54,237	0/0:19,0:19:39.73:0,40,171	1/1:18,0:18:26.68:257,27,0	0/0:25,0:25:29.76:0,30,84	1/1:4,5:9:5.93:57,6,0	0/0:17,0:17:27.83:0,28,205	0/0:18,0:18:27.98:0,28,239	0/0:5,0:5:8.96:0,9,79	0/0:28,0:29:18.72:0,19,53	0/0:36,0:35:39.16:0,39,622	0/0:32,0:32:1.05:0,1,29	0/0:18,0:18:24.04:0,24,263
chr10	63433675	.	T	TACATACA	16355.58	PASS	AB=0.889;AC=40;AF=0.714;AN=56;BaseQRankSum=-2.746;DP=505;FS=23.038;HRun=0;HaplotypeScore=131.6970;InbreedingCoeff=-0.2220;MQ=58.96;MQ0=3;MQRankSum=-6.722;QD=33.31;ReadPosRankSum=6.761;VQSLOD=2.9215;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:17,0:17:65.40:65,0,228	0/1:4,0:6:18.07:43,0,18	0/0:14,0:7:16.54:0,17,138	0/1:10,0:7:8.17:8,0,93	0/1:18,0:18:99:260,0,266	1/1:0,19:22:21.06:850,21,0	1/1:1,3:7:9:262,9,0	0/1:25,0:30:99:162,0,116	0/1:18,1:28:58.30:981,0,58	1/1:0,24:29:87.25:2539,87,0	1/1:0,20:22:12.01:485,12,0	1/1:0,17:19:24.08:971,24,0	0/1:20,0:20:99:515,0,251	1/1:0,10:14:21.04:750,21,0	1/1:2,11:14:18.05:728,18,0	1/1:1,13:14:21.07:850,21,0	0/1:7,0:27:32.56:193,0,33	0/1:4,0:19:99:206,0,128	1/1:0,10:15:45.09:628,45,0	1/1:0,17:21:17.68:618,18,0	1/1:7,0:7:11.99:169,12,0	0/1:13,0:13:62.53:412,0,63	0/1:13,0:13:99:228,0,143	0/1:4,0:4:46.97:69,0,47	1/1:1,22:28:30.06:1099,30,0	0/1:27,1:27:99:803,0,249	1/1:1,29:32:60.14:2323,60,0	0/1:13,0:13:99:136,0,190
chr10	63433682	.	T	TA	974.69	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=0.475;DP=513;FS=0.000;HRun=6;HaplotypeScore=159.3543;InbreedingCoeff=0.6301;MQ=59.15;MQ0=3;MQRankSum=1.886;QD=7.61;ReadPosRankSum=-1.012;VQSLOD=-0.0767;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:28.82:0,29,258	1/1:3,2:5:0.10:49,0,0	0/1:14,0:8:19.13:19,0,55	0/1:8,0:5:1.46:1,0,4	0/0:20,0:20:24.67:0,25,300	0/0:23,0:23:23.34:0,23,148	0/0:8,0:8:8.72:0,9,49	0/1:31,0:31:6.37:104,0,6	1/1:19,8:27:25.77:297,26,0	0/0:31,0:31:76.01:0,76,500	0/0:22,0:22:46.32:0,46,279	0/0:18,0:18:26.39:0,26,164	0/0:21,0:21:51.65:0,52,403	0/0:15,0:15:23.26:0,23,142	0/0:16,0:16:29.52:0,30,211	0/0:14,0:13:20.75:0,21,142	1/1:9,13:22:15.65:318,16,0	1/1:10,11:21:39.41:343,39,0	0/0:17,0:17:46.59:0,47,277	0/0:22,0:22:57.20:0,57,321	0/0:6,0:6:8.75:0,9,49	0/0:13,0:13:9.80:0,10,113	0/0:15,0:15:31.43:0,31,264	0/0:4,0:4:8.81:0,9,62	0/0:28,0:28:37.90:0,38,248	0/0:30,0:29:65.34:0,65,566	0/0:31,0:31:50.11:0,50,336	0/0:13,0:13:26.88:0,27,240
chr10	63433876	.	G	GA	292.06	PASS	AB=0.859;AC=6;AF=0.107;AN=56;BaseQRankSum=3.026;DP=453;FS=5.524;HRun=9;HaplotypeScore=60.3523;InbreedingCoeff=0.2607;MQ=77.19;MQ0=0;MQRankSum=-5.116;QD=5.22;ReadPosRankSum=-0.684;VQSLOD=0.2835;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:31:74.06:0,74,623	0/0:3,0:3:9:0,9,78	0/1:17,0:18:10.71:11,0,198	0/0:19,0:17:26.88:0,27,229	0/0:19,0:19:45.03:0,45,375	0/0:11,0:11:20.28:0,20,181	0/0:10,0:10:26.03:0,26,214	0/0:33,0:33:69.66:0,70,581	0/0:15,0:15:13.66:0,14,239	0/0:10,0:10:26.98:0,27,234	0/0:16,0:16:36.46:0,36,313	0/0:11,0:11:26.66:0,27,219	0/0:15,0:15:36.45:0,36,296	0/0:13,0:13:28.99:0,29,251	0/0:19,0:19:43.88:0,44,410	0/0:14,0:14:35.05:0,35,298	0/0:20,0:20:50.98:0,51,440	0/1:10,1:11:3.15:3,0,204	0/0:26,0:26:56.15:0,56,461	0/0:20,0:20:22.71:0,23,342	0/0:13,0:13:29.98:0,30,260	0/1:7,0:7:0.82:1,0,67	0/0:13,0:13:32.99:0,33,285	0/0:24,0:24:53.97:0,54,469	0/0:18,0:18:50.01:0,50,419	0/1:4,11:16:12.65:316,0,13	0/0:24,0:24:34.44:0,34,352	1/1:0,4:4:6.02:66,6,0
chr10	63434529	.	CTGTGTGTGTG	C	357.35	PASS	AB=0.958;AC=6;AF=0.167;AN=36;BaseQRankSum=-0.906;DP=333;FS=4.260;HRun=0;HaplotypeScore=98.3699;InbreedingCoeff=0.2961;MQ=43.12;MQ0=25;MQRankSum=0.906;QD=4.96;ReadPosRankSum=-3.170;VQSLOD=1.1032;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/0:5,0:5:3.01:0,3,32	./.	./.	./.	./.	0/1:12,0:8:0.11:0,0,0	1/1:15,6:19:17.42:158,17,0	0/0:11,0:11:0:0,0,0	0/0:10,0:9:2.90:0,3,16	0/1:9,0:8:0.07:0,0,0	0/0:9,0:8:1.41:0,1,2	0/0:21,0:21:2.97:0,3,20	0/1:10,0:9:0.04:0,0,0	0/0:10,0:10:0.36:0,0,1	0/0:15,0:13:0.47:0,0,1	./.	./.	0/0:5,0:5:2.99:0,3,24	0/0:10,0:14:0.47:0,0,1	0/0:6,0:4:0.47:0,0,1	./.	./.	0/0:23,0:21:2.98:0,3,22	0/0:14,0:13:0.36:0,0,1	0/1:16,1:18:5.10:283,0,5	0/0:9,0:8:2.14:0,2,50	./.
chr10	63434559	.	G	GCA	35.53	PASS	AB=0.953;AC=9;AF=0.237;AN=38;BaseQRankSum=3.221;DP=281;FS=0.000;HRun=0;HaplotypeScore=84.8119;InbreedingCoeff=0.2694;MQ=28.79;MQ0=27;MQRankSum=-0.905;QD=0.41;ReadPosRankSum=1.173;VQSLOD=1.1913;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	0/0:7,0:6:3.01:0,3,44	0/0:3,0:1:2.97:0,3,20	0/0:11,0:1:3.01:0,3,48	./.	./.	1/1:10,1:7:0.28:1,0,0	0/0:11,0:10:29.12:0,29,355	0/0:9,0:7:0:0,0,0	0/0:9,0:8:10.46:0,10,140	0/0:9,0:9:0:0,0,0	0/1:11,0:10:0:0,0,0	0/0:10,0:10:6.02:0,6,74	0/0:8,1:8:1.20:0,1,3	0/1:13,1:14:0:0,0,0	./.	./.	./.	0/1:8,0:6:21.12:21,0,123	./.	./.	./.	1/1:19,0:17:2.98:22,3,0	0/0:23,0:22:3.01:0,3,46	0/1:13,1:13:0:0,0,0	0/0:15,0:13:19.64:0,20,240	0/1:8,1:9:0.82:79,0,1	0/0:3,0:1:2.88:0,3,15
chr10	63434562	.	TGTGTGTGTGTGTGC	T	249.47	PASS	AB=1.000;AC=8;AF=0.190;AN=42;BaseQRankSum=0.854;DP=282;FS=0.000;HRun=0;HaplotypeScore=64.8992;InbreedingCoeff=0.2545;MQ=28.83;MQ0=27;MQRankSum=-0.320;QD=3.01;ReadPosRankSum=0.925;VQSLOD=1.3139;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	0/0:7,0:6:3.01:0,3,49	0/0:3,0:1:2.96:0,3,19	0/0:11,0:1:3.01:0,3,51	./.	./.	0/1:10,0:7:0:0,0,0	0/0:10,0:9:24.05:0,24,125	0/0:10,0:8:0.47:0,0,1	0/0:9,0:8:14.03:0,14,66	0/1:9,0:9:0:0,0,0	0/0:12,0:11:3.23:0,3,7	0/1:9,0:9:12.97:13,0,31	0/0:10,0:9:0.45:0,0,1	0/0:14,0:14:0.38:0,0,1	0/0:14,0:14:0.47:0,0,1	./.	./.	0/0:8,0:6:16.99:0,17,95	0/0:15,0:13:0.47:0,0,1	0/0:7,0:4:0.47:0,0,1	./.	1/1:7,12:17:1.82:5,2,0	1/1:24,0:23:1.25:3,1,0	0/0:14,0:13:0.38:0,0,1	0/1:12,0:10:31.16:312,0,31	0/0:8,0:8:4.73:0,5,74	./.
chr10	63434563	.	G	GCACA	123.14	PASS	AB=0.943;AC=12;AF=0.316;AN=38;BaseQRankSum=2.771;DP=283;FS=0.000;HRun=0;HaplotypeScore=86.5291;InbreedingCoeff=0.3529;MQ=28.87;MQ0=27;MQRankSum=-1.521;QD=1.27;ReadPosRankSum=-0.849;VQSLOD=0.7338;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/0:7,0:6:3.01:0,3,43	0/0:3,0:1:3.01:0,3,62	0/0:11,0:1:3.01:0,3,62	./.	./.	0/0:9,1:7:0:0,0,1	0/0:10,0:9:27.09:0,27,498	0/0:10,0:8:0:0,0,0	0/0:9,0:8:15.03:0,15,265	0/0:10,0:10:0:0,0,0	1/1:12,0:11:2.53:14,3,0	0/0:9,0:9:5.96:0,6,82	0/1:9,1:9:0.06:0,0,0	0/1:13,1:14:0:0,0,0	1/1:14,0:14:2.04:7,2,0	./.	./.	0/1:8,0:6:42.39:42,0,251	./.	./.	./.	1/1:18,0:16:2.37:8,2,0	0/0:24,0:23:3.01:0,3,62	0/1:12,1:12:0:0,0,0	0/0:13,0:11:17.58:0,18,434	1/1:7,1:8:6.49:151,6,0	./.
chr10	63434567	.	G	GCACA	93.83	PASS	AB=0.863;AC=19;AF=0.475;AN=40;BaseQRankSum=4.002;DP=276;FS=0.000;HRun=0;HaplotypeScore=85.1057;InbreedingCoeff=0.3253;MQ=29.24;MQ0=24;MQRankSum=-1.898;QD=0.76;ReadPosRankSum=-3.373;VQSLOD=0.9502;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	0/0:8,0:7:3.84:0,4,21	0/0:3,0:1:3.01:0,3,62	0/0:11,0:1:3.01:0,3,62	1/1:11,0:11:0.89:2,1,0	./.	0/1:4,3:7:0.01:1,0,0	0/0:12,0:11:15.79:0,16,395	0/0:8,0:7:0:0,0,0	0/0:9,0:8:14.88:0,15,262	1/1:6,4:10:0.78:2,1,0	1/1:9,3:11:0.13:1,0,0	0/1:8,0:8:0.92:1,0,43	0/0:8,4:11:0.04:0,0,0	1/1:10,4:14:0.26:1,0,0	1/1:11,3:14:2.04:6,2,0	./.	./.	0/1:7,1:6:68.06:68,0,287	./.	./.	./.	1/1:17,0:15:2.37:8,2,0	0/0:19,0:19:3.01:0,3,43	1/1:11,3:13:0.10:1,0,0	0/0:14,0:12:25.78:0,26,347	1/1:8,0:8:6.49:100,6,0	./.
chr10	63434569	.	G	GTAAA	142.56	PASS	AB=0.983;AC=24;AF=0.571;AN=42;BaseQRankSum=4.037;DP=268;FS=2.675;HRun=0;HaplotypeScore=79.3523;InbreedingCoeff=0.2578;MQ=29.41;MQ0=19;MQRankSum=-1.459;QD=0.83;ReadPosRankSum=-3.498;VQSLOD=0.8650;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	0/0:8,0:7:3.83:0,4,20	0/0:3,0:1:3.01:0,3,59	0/0:11,0:1:3.01:0,3,60	1/1:11,0:11:0.89:2,1,0	./.	1/1:6,1:7:1.75:12,2,0	0/1:12,0:11:30.82:31,0,276	./.	0/0:7,0:7:12.04:0,12,216	1/1:10,0:10:2.84:14,3,0	1/1:12,0:11:0.47:2,0,0	1/1:6,0:6:2.03:6,2,0	1/1:12,1:13:5.75:22,6,0	1/1:13,1:14:2.84:14,3,0	0/1:14,0:14:0:0,0,0	./.	./.	0/0:8,0:6:13:0,13,242	0/1:15,0:14:0:0,0,0	0/1:6,0:4:0:0,0,0	./.	1/1:15,0:14:3:25,3,0	0/0:16,0:16:2.96:0,3,19	1/1:13,1:13:5.50:27,6,0	0/1:14,0:12:11.24:11,0,331	0/1:8,1:9:2.38:94,0,2	./.
chr10	63436595	.	G	GT	893.44	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-4.244;DP=772;FS=4.168;HRun=1;HaplotypeScore=103.0355;InbreedingCoeff=0.9997;MQ=58.83;MQ0=1;MQRankSum=-1.042;QD=35.74;ReadPosRankSum=2.455;VQSLOD=3.7293;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:87.26:0,87,1129	0/0:16,0:16:48.16:0,48,622	0/0:34,0:31:84.66:0,85,1015	0/0:32,0:32:84.73:0,85,1060	0/0:29,0:29:57.19:0,57,739	0/0:30,0:30:69.22:0,69,895	0/0:19,0:19:48.16:0,48,622	0/0:38,0:38:99:0,111,1441	1/1:1,24:25:66.22:988,66,0	0/0:37,0:38:99:0,105,1347	0/0:16,0:16:42.14:0,42,544	0/0:29,0:29:75.24:0,75,973	0/0:37,0:37:81.26:0,81,1050	0/0:26,0:26:60.19:0,60,775	0/0:27,0:27:60.20:0,60,778	0/0:25,0:25:69.22:0,69,894	0/0:32,0:32:87.27:0,87,1115	0/0:23,0:23:69.22:0,69,895	0/0:20,0:20:57.17:0,57,722	0/0:37,0:37:99:0,105,1363	0/0:35,0:35:99:0,102,1324	0/0:20,0:20:42.12:0,42,531	0/0:24,0:24:48.16:0,48,622	0/0:33,0:33:84.25:0,84,1074	0/0:22,0:22:57.19:0,57,739	0/0:31,0:31:87.23:0,87,1073	0/0:25,0:25:60.17:0,60,760	0/0:13,0:13:33.11:0,33,428
chr10	63436910	.	T	TA	9817.56	PASS	AB=0.596;AC=43;AF=0.768;AN=56;BaseQRankSum=-7.777;DP=596;FS=3.044;HRun=10;HaplotypeScore=119.0398;InbreedingCoeff=0.7319;MQ=72.55;MQ0=0;MQRankSum=-2.174;QD=20.24;ReadPosRankSum=0.790;VQSLOD=4.2197;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:9,33:43:84.21:895,84,0	1/1:2,6:8:1.51:172,2,0	0/0:16,0:15:25.96:0,26,201	0/0:8,0:7:8.99:0,9,74	1/1:9,11:21:41.90:417,42,0	1/1:3,18:21:26.50:487,26,0	1/1:5,12:17:11.12:307,11,0	0/1:9,19:28:10.81:488,0,11	1/1:3,21:24:7.85:495,8,0	1/1:8,17:25:29.49:518,29,0	1/1:5,17:22:29.41:495,29,0	1/1:3,14:17:17.47:391,17,0	0/0:3,0:17:24.44:0,24,71	1/1:4,10:14:5.43:263,5,0	1/1:6,20:26:32.51:551,33,0	1/1:3,13:16:9.71:324,10,0	1/1:5,26:31:1.26:630,1,0	1/1:4,12:16:33.08:352,33,0	1/1:8,16:24:7.87:495,8,0	1/1:10,27:37:13.26:746,13,0	1/1:4,11:16:20.24:250,20,0	0/0:3,0:30:52.96:0,53,153	0/0:3,0:22:36.66:0,37,106	0/0:0,0:18:28.52:0,29,82	1/1:4,16:20:11.45:327,11,0	1/1:9,20:29:57.05:575,57,0	1/1:5,20:25:54.14:576,54,0	1/1:3,2:5:6.02:64,6,0
chr10	63437191	.	AAC	A	724.28	PASS	AB=0.918;AC=24;AF=0.462;AN=52;BaseQRankSum=0.325;DP=597;FS=0.726;HRun=0;HaplotypeScore=88.0882;InbreedingCoeff=0.2140;MQ=64.70;MQ0=8;MQRankSum=0.816;QD=2.18;ReadPosRankSum=0.314;VQSLOD=1.7976;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:39:11.97:0,12,97	0/0:9,0:10:15.01:0,15,163	./.	./.	0/1:21,1:22:14.13:14,0,126	0/1:12,0:12:16.67:17,0,40	0/1:23,0:23:19.77:20,0,116	0/0:26,0:26:1.25:0,1,3	0/0:13,0:20:5.87:0,6,52	0/0:12,0:14:6.45:0,6,48	1/1:11,2:13:3:32,3,0	1/1:10,1:11:8.77:63,9,0	0/0:21,1:22:0.98:0,1,317	0/1:17,4:21:10.96:55,0,11	1/1:21,5:30:25.09:232,25,0	1/1:20,0:21:8.80:65,9,0	0/0:23,0:25:27.02:0,27,295	0/0:10,0:16:15.90:0,16,163	1/1:20,2:21:6:55,6,0	0/0:16,0:17:8.94:0,9,103	1/1:31,1:28:11.67:93,12,0	0/1:26,1:28:11.13:11,0,285	0/0:25,0:24:21.04:0,21,224	0/1:36,1:37:47.07:47,0,230	1/1:11,4:14:5.97:64,6,0	1/1:7,6:12:8.15:63,8,0	0/1:19,1:20:7.22:26,0,7	0/1:6,4:11:24.04:37,0,24
chr10	63437623	.	C	CTA	3199.30	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-9.689;DP=819;FS=8.412;HRun=0;HaplotypeScore=94.1053;InbreedingCoeff=0.9979;MQ=86.42;MQ0=1;MQRankSum=-4.927;QD=44.43;ReadPosRankSum=1.644;VQSLOD=5.0367;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,41:44:84.38:2030,84,0	0/0:7,0:7:21.07:0,21,309	0/0:26,0:25:63.15:0,63,856	0/0:33,0:32:87.01:0,87,1174	1/1:2,25:27:69.24:1291,69,0	0/0:33,0:33:99:0,99,1458	0/0:32,0:32:90.30:0,90,1326	0/0:31,0:31:84.27:0,84,1203	0/0:37,0:37:99:0,105,1526	0/0:34,0:34:96.31:0,96,1381	0/0:17,0:16:42.13:0,42,598	0/0:34,0:34:93.31:0,93,1370	0/0:29,0:29:87.26:0,87,1241	0/0:32,0:32:93.31:0,93,1352	0/0:42,0:42:99:0,123,1804	0/0:39,0:39:99:0,105,1527	0/0:33,0:33:99:0,99,1457	0/0:22,0:22:66.22:0,66,972	0/0:27,0:27:78.26:0,78,1147	0/0:24,0:24:66.22:0,66,972	0/0:43,0:43:99:0,123,1791	0/0:25,0:25:75.21:0,75,1080	0/0:19,0:19:51.16:0,51,732	0/0:33,0:33:96.30:0,96,1374	0/0:15,0:15:42.14:0,42,618	0/0:34,1:35:40.08:0,40,1261	0/0:25,0:25:69.22:0,69,996	0/0:20,0:20:60.19:0,60,863
chr10	63437985	.	CG	C	2422.19	PASS	AB=0.905;AC=49;AF=0.875;AN=56;BaseQRankSum=1.078;DP=311;FS=0.809;HRun=2;HaplotypeScore=47.1399;InbreedingCoeff=0.5626;MQ=51.10;MQ0=11;MQRankSum=-2.286;QD=9.14;ReadPosRankSum=0.375;VQSLOD=1.1153;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,16:18:8.93:80,9,0	1/1:5,0:5:8.94:68,9,0	0/1:16,2:7:6.93:7,0,95	0/0:14,1:2:2.84:0,3,14	1/1:12,1:13:26.86:211,27,0	1/1:7,0:6:7.78:47,8,0	1/1:8,0:8:8.86:57,9,0	1/1:13,0:13:29.78:217,30,0	1/1:3,0:3:9:80,9,0	1/1:13,0:9:23.83:174,24,0	1/1:2,5:6:2.94:18,3,0	1/1:11,0:11:24.19:159,24,0	1/1:14,1:15:29.66:223,30,0	1/1:8,0:8:11.88:83,12,0	1/1:11,0:8:17.78:122,18,0	1/1:5,0:5:5.94:41,6,0	1/1:21,0:20:28.05:197,28,0	1/1:16,0:15:24.74:184,25,0	1/1:4,3:5:10.78:74,11,0	1/1:11,0:10:20.03:124,20,0	1/1:7,0:7:5.97:46,6,0	1/1:10,0:10:12.11:81,12,0	1/1:11,0:12:5.99:51,6,0	1/1:12,0:12:14.45:91,14,0	1/1:4,0:4:5.93:40,6,0	0/0:18,0:17:45.08:0,45,476	1/1:8,0:8:12.82:91,13,0	0/0:12,0:11:15.23:0,15,102
chr10	63439098	.	T	TA	2853.06	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-1.821;DP=581;FS=8.493;HRun=5;HaplotypeScore=86.5589;InbreedingCoeff=0.9983;MQ=80.47;MQ0=0;MQRankSum=0.152;QD=31.35;ReadPosRankSum=2.606;VQSLOD=4.0404;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:90.20:0,90,955	0/0:11,0:11:33.08:0,33,354	0/0:12,0:12:26.15:0,26,285	0/0:18,0:18:27.30:0,27,292	0/0:11,0:11:33.08:0,33,348	0/0:23,0:23:60.15:0,60,645	0/0:21,0:21:60.15:0,60,645	0/0:28,0:28:63.15:0,63,677	0/0:25,0:25:72.18:0,72,774	0/0:16,0:16:36.08:0,36,375	0/0:11,0:11:24.06:0,24,258	0/0:15,0:15:45.11:0,45,484	1/1:1,13:14:39.13:513,39,0	0/0:29,0:29:84.19:0,84,892	0/0:24,0:24:69.16:0,69,733	0/0:22,0:22:66.12:0,66,685	0/0:36,0:36:99:0,102,1096	0/0:12,0:12:30.02:0,30,300	0/0:19,0:19:44.14:0,44,457	0/0:20,0:20:29.25:0,29,436	0/0:22,0:22:57.08:0,57,583	1/1:4,30:34:84.74:1102,85,0	1/1:3,19:22:48.07:609,48,0	1/1:0,21:21:60.20:790,60,0	0/0:14,0:14:39.06:0,39,407	0/0:26,0:26:70.77:0,71,770	0/0:26,0:26:63.15:0,63,676	0/0:17,0:17:48.12:0,48,515
chr10	63439238	.	C	CCA	19003.54	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=-17.502;DP=646;FS=5.468;HRun=0;HaplotypeScore=65.6674;InbreedingCoeff=0.9895;MQ=91.91;MQ0=0;MQRankSum=-2.412;QD=53.23;ReadPosRankSum=2.695;VQSLOD=5.5860;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:57:99:0,168,2645	0/0:3,0:3:9.03:0,9,143	0/0:30,0:30:89.66:0,90,1257	0/0:24,0:24:37.89:0,38,784	0/0:17,0:17:48.15:0,48,758	1/1:0,20:21:51.18:1035,51,0	1/1:0,31:32:84.29:1704,84,0	0/0:25,0:25:69.18:0,69,1051	1/1:0,28:30:75.23:1523,75,0	1/1:0,21:23:66.23:1328,66,0	1/1:0,14:14:30.09:609,30,0	1/1:0,16:17:42.14:853,42,0	0/0:19,0:19:54.18:0,54,873	1/1:0,24:25:69.24:1401,69,0	1/1:1,16:19:42.14:853,42,0	1/1:0,13:13:36.12:731,36,0	0/0:36,0:36:99:0,108,1658	0/0:21,0:21:60.20:0,60,970	1/1:0,19:21:60.18:1149,60,0	1/1:0,23:23:63.17:1237,63,0	1/1:0,33:33:78.20:1541,78,0	0/0:14,0:14:42.14:0,42,684	0/0:10,0:10:30.10:0,30,486	0/0:33,0:33:93.26:0,93,1463	1/1:0,27:27:75.26:1523,75,0	1/1:0,30:30:90.31:1812,90,0	1/1:0,24:24:69.24:1398,69,0	1/1:0,5:5:15.05:305,15,0
chr10	63441593	.	TA	T	2331.40	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.883;DP=681;FS=2.926;HRun=2;HaplotypeScore=66.2258;InbreedingCoeff=0.9994;MQ=92.47;MQ0=0;MQRankSum=-3.172;QD=32.84;ReadPosRankSum=3.066;VQSLOD=3.6992;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:0,42:42:99:1596,123,0	0/0:12,0:12:36.12:0,36,531	0/0:32,0:32:87.29:0,87,1300	0/0:29,0:29:82.45:0,82,1114	1/1:0,29:29:66.21:857,66,0	0/0:20,0:20:57.19:0,57,854	0/0:28,0:28:84.28:0,84,1259	0/0:18,0:18:51.17:0,51,765	0/0:15,0:15:45.15:0,45,674	0/0:26,0:26:78.26:0,78,1151	0/0:16,0:16:48.15:0,48,699	0/0:36,0:36:99:0,105,1570	0/0:23,0:23:69.23:0,69,1034	0/0:19,0:19:54.18:0,54,809	0/0:26,0:26:78.26:0,78,1152	0/0:22,0:21:63.21:0,63,944	0/0:31,0:31:93.29:0,93,1361	0/0:37,0:37:99:0,111,1661	0/0:18,0:18:54.17:0,54,785	0/0:21,0:21:57.17:0,57,813	0/0:28,0:28:81.27:0,81,1214	0/0:22,0:22:66.21:0,66,970	0/0:17,0:17:51.16:0,51,744	0/0:28,0:28:81.27:0,81,1213	0/0:23,0:23:69.21:0,69,1011	0/0:24,0:24:69.23:0,69,1031	0/0:30,0:29:90.30:0,90,1347	0/0:9,0:9:27.09:0,27,405
chr10	63442125	.	GC	G	3901.50	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=10.860;DP=715;FS=0.401;HRun=1;HaplotypeScore=65.3368;InbreedingCoeff=0.9913;MQ=91.71;MQ0=0;MQRankSum=-1.498;QD=41.51;ReadPosRankSum=-1.353;VQSLOD=3.5374;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,154,2421	1/1:0,10:10:30.10:420,30,0	0/0:33,0:33:99:0,99,1581	0/0:25,0:25:69.23:0,69,1086	0/0:24,0:24:72.20:0,72,1102	0/0:26,0:26:78.24:0,78,1217	0/0:23,0:23:69.20:0,69,1054	1/1:0,39:39:99:1636,117,0	0/0:27,0:27:81.28:0,81,1295	0/0:24,0:24:72.25:0,72,1152	0/0:22,0:22:66.23:0,66,1055	0/0:33,0:33:99:0,99,1560	0/0:28,0:28:80.58:0,81,1291	0/0:27,0:27:81.26:0,81,1272	0/0:28,0:28:84.26:0,84,1297	0/0:15,0:15:45.15:0,45,717	1/1:0,27:27:78.26:1091,78,0	1/1:0,18:18:54.18:755,54,0	0/0:21,0:21:63.21:0,63,1008	0/0:20,0:20:60.20:0,60,958	0/0:56,0:56:99:0,166,2602	0/0:25,0:25:75.26:0,75,1199	0/0:23,0:23:69.24:0,69,1101	0/0:23,0:23:66.23:0,66,1055	0/0:16,0:16:48.16:0,48,766	0/0:24,0:24:72.23:0,72,1126	0/0:23,0:22:69.24:0,69,1100	0/0:4,0:4:12.04:0,12,192
chr10	63444464	.	T	TTGTG	4216.52	PASS	AB=0.815;AC=37;AF=0.712;AN=52;BaseQRankSum=-4.852;DP=691;FS=5.381;HRun=0;HaplotypeScore=140.5738;InbreedingCoeff=0.2784;MQ=54.96;MQ0=22;MQRankSum=3.783;QD=7.67;ReadPosRankSum=-2.403;VQSLOD=3.4357;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:21:2.64:46,3,0	0/0:0,0:4:9.01:0,9,84	./.	0/1:48,0:23:0:0,0,0	1/1:12,0:11:2.99:23,3,0	0/1:26,0:26:25.20:220,0,25	0/1:23,7:31:5.12:277,0,5	0/0:15,0:25:5.48:0,5,25	1/1:13,2:26:17.90:307,18,0	1/1:15,4:21:31.44:429,31,0	1/1:20,0:21:7.77:42,8,0	1/1:8,11:25:20.81:405,21,0	1/1:11,0:26:9.03:180,9,0	1/1:12,11:25:13.59:229,14,0	0/1:18,10:29:21.30:349,0,21	0/1:17,12:30:20.04:439,0,20	0/0:14,0:26:9.01:0,9,84	0/0:9,0:19:12.01:0,12,112	1/1:19,0:19:6.02:105,6,0	1/1:12,13:25:6.02:141,6,0	0/1:36,7:43:35.01:141,0,35	0/1:5,0:10:0:0,0,0	1/1:21,0:21:8.97:107,9,0	./.	1/1:12,0:20:2.65:12,3,0	1/1:15,0:29:24.58:345,25,0	1/1:10,6:23:17.80:365,18,0	1/1:10,0:12:3.01:53,3,0
chr10	63445525	.	C	CT	22467.61	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-5.655;DP=563;FS=25.945;HRun=0;HaplotypeScore=53.7775;InbreedingCoeff=0.9980;MQ=84.50;MQ0=0;MQRankSum=-10.508;QD=43.04;ReadPosRankSum=4.915;VQSLOD=2.7703;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,21:22:51.17:814,51,0	1/1:0,11:11:30.10:479,30,0	0/0:24,0:24:69.23:0,69,964	0/0:17,0:17:51.16:0,51,697	1/1:0,22:22:57.19:910,57,0	1/1:0,19:19:42.14:670,42,0	1/1:0,11:11:27.09:428,27,0	1/1:0,34:34:99:1553,99,0	1/1:0,27:27:75.26:1196,75,0	1/1:1,24:25:72.23:1125,72,0	1/1:1,25:26:72.25:1147,72,0	1/1:0,20:20:54.18:862,54,0	1/1:0,17:17:48.16:767,48,0	1/1:0,18:18:51.17:814,51,0	1/1:0,13:13:24.08:383,24,0	1/1:1,15:16:39.13:623,39,0	1/1:2,25:27:72.25:1149,72,0	1/1:0,16:16:42.14:670,42,0	1/1:0,16:16:48.15:742,48,0	1/1:0,19:19:54.18:861,54,0	1/1:0,17:17:48.16:767,48,0	1/1:1,21:22:63.21:1004,63,0	1/1:0,22:22:54.18:861,54,0	1/1:0,14:14:39.13:623,39,0	1/1:0,23:23:63.21:1004,63,0	1/1:0,26:26:78.22:1212,78,0	1/1:0,18:19:54.18:846,54,0	1/1:0,20:20:60.20:957,60,0
chr10	63445637	.	C	CTG	1240.47	PASS	AB=0.977;AC=33;AF=0.660;AN=50;BaseQRankSum=0.143;DP=617;FS=8.502;HRun=0;HaplotypeScore=144.7098;InbreedingCoeff=0.2565;MQ=58.07;MQ0=22;MQRankSum=2.409;QD=2.37;ReadPosRankSum=-2.393;VQSLOD=1.5409;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	0/1:20,0:14:0:0,0,0	0/1:21,0:20:0:1,0,0	0/1:24,0:21:0.04:0,0,0	0/1:17,0:16:6.24:18,0,6	1/1:33,0:33:6.86:41,7,0	1/1:25,0:20:6.22:21,6,0	1/1:27,0:25:11.79:108,12,0	1/1:15,0:15:5.99:63,6,0	0/1:16,0:13:0.03:0,0,0	0/1:25,3:28:46.47:178,0,46	0/1:22,0:18:0.03:0,0,0	0/1:18,0:16:0.05:0,0,0	1/1:25,0:22:2.98:22,3,0	0/0:21,0:21:0.38:0,0,56	0/0:14,0:13:9.22:0,9,127	1/1:17,0:16:7.32:61,7,0	1/1:24,0:20:2.95:42,3,0	0/1:34,0:30:0.23:1,0,0	1/1:26,4:29:15.05:223,15,0	1/1:22,2:24:9.03:133,9,0	0/1:29,7:35:2.87:316,0,3	1/1:27,0:25:5.61:52,6,0	0/1:24,0:25:8.13:15,0,8	1/1:14,0:11:9.33:67,9,0	0/0:14,0:14:5.06:0,5,21
chr10	63445698	.	GTTA	G	255.06	PASS	AB=0.980;AC=11;AF=0.196;AN=56;BaseQRankSum=1.821;DP=737;FS=1.684;HRun=0;HaplotypeScore=340.7727;InbreedingCoeff=-0.0316;MQ=37.29;MQ0=25;MQRankSum=-3.322;QD=1.18;ReadPosRankSum=-4.152;VQSLOD=1.1302;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:27.80:0,28,581	1/1:1,2:3:0.88:2,1,0	0/0:64,0:16:44.98:0,45,816	0/0:64,1:22:57.14:0,57,1150	0/0:23,0:23:31.19:0,31,663	0/0:14,0:14:14.29:0,14,124	0/0:33,1:31:15.97:0,16,494	0/1:15,3:13:71.05:94,0,71	0/1:27,0:25:48.97:49,0,179	0/0:42,0:39:65.89:0,66,967	0/1:35,0:35:43.50:43,0,96	0/1:24,0:23:3.45:3,0,370	0/0:30,0:28:69.59:0,70,993	0/1:28,0:27:11:11,0,328	0/0:25,0:24:35.48:0,35,350	0/0:30,0:30:62.39:0,62,682	0/1:12,0:11:11.54:12,0,50	0/0:8,0:8:18.92:0,19,104	0/0:21,0:13:33.07:0,33,396	0/0:29,0:29:10.74:0,11,97	0/1:30,0:27:1.03:28,0,1	0/0:17,0:16:29.46:0,29,448	0/0:13,0:13:5.43:0,5,136	0/0:28,0:27:39.33:0,39,916	0/0:27,0:27:47.89:0,48,454	0/1:26,1:24:66.92:67,0,368	0/0:18,0:17:44.44:0,44,610	0/1:13,0:13:80.28:80,0,139
chr10	63445699	.	T	TGTGG	10190.01	PASS	AB=0.696;AC=32;AF=0.571;AN=56;BaseQRankSum=-0.522;DP=727;FS=6.026;HRun=0;HaplotypeScore=317.4772;InbreedingCoeff=0.0389;MQ=37.58;MQ0=23;MQRankSum=-3.384;QD=19.60;ReadPosRankSum=0.312;VQSLOD=3.7432;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:30:86.64:87,0,268	1/1:3,0:3:2.98:21,3,0	0/0:62,0:16:31.43:0,31,542	0/0:62,0:21:55.91:0,56,913	0/0:23,0:24:30.06:0,30,585	0/1:5,8:13:10.04:164,0,10	1/1:8,24:30:53.76:1342,54,0	1/1:8,0:7:2.29:65,2,0	1/1:14,1:25:27.82:347,28,0	0/1:14,23:38:99:1403,0,150	1/1:19,13:34:15.72:330,16,0	0/1:16,8:24:56.95:423,0,57	0/1:24,0:30:99:112,0,619	0/1:15,14:28:59.93:576,0,60	0/1:11,13:24:48.72:441,0,49	0/1:16,14:30:22.55:1103,0,23	1/1:4,0:10:19.86:136,20,0	0/1:3,0:8:4.19:93,0,4	0/1:13,9:15:54.75:672,0,55	1/1:16,11:29:13.82:229,14,0	1/1:11,18:26:6.96:97,7,0	0/0:12,0:16:2.76:0,3,345	0/0:12,0:15:5.87:0,6,122	0/0:24,0:26:36.83:0,37,812	0/1:19,7:27:90.67:432,0,91	1/1:6,13:24:31.89:1021,32,0	0/1:11,8:18:99:543,0,119	1/1:5,3:13:11.86:553,12,0
chr10	63445715	.	GTGTGTTA	G	4864.85	PASS	AB=0.826;AC=17;AF=0.304;AN=56;BaseQRankSum=4.977;DP=784;FS=56.040;HRun=0;HaplotypeScore=400.7284;InbreedingCoeff=-0.2230;MQ=34.86;MQ0=21;MQRankSum=-6.118;QD=12.64;ReadPosRankSum=3.833;VQSLOD=1.7600;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:35:65.05:0,65,1192	0/1:8,0:8:9.20:9,0,26	0/0:60,0:18:48.14:0,48,1251	0/0:54,0:18:45.15:0,45,1110	0/0:28,0:28:44.84:0,45,1440	1/1:10,3:12:3.12:148,3,0	0/1:25,6:29:99:174,0,668	0/1:17,0:14:27.26:27,0,203	0/0:30,0:27:30.69:0,31,195	0/1:34,7:38:99:696,0,1047	0/0:18,14:33:11.63:0,12,369	0/1:15,11:25:98.13:636,0,98	0/1:35,0:33:64.52:65,0,651	0/1:18,16:33:99:534,0,559	1/1:18,10:27:1.95:572,2,0	0/1:17,17:34:99:563,0,810	0/0:12,0:11:18.76:0,19,200	0/0:8,0:8:13.11:0,13,226	0/1:27,4:21:99:114,0,839	0/0:17,12:29:8.03:0,8,130	0/0:28,1:25:0.87:0,1,88	0/0:28,0:28:6.04:0,6,660	0/0:22,0:23:20.68:0,21,273	0/0:28,0:27:33.03:0,33,1042	0/1:10,20:30:99:638,0,219	0/1:20,2:22:45.83:46,0,486	0/1:12,11:20:99:594,0,341	0/1:10,1:11:49.74:50,0,287
chr10	63445719	.	GTTA	G	1519.51	PASS	AB=0.902;AC=16;AF=0.286;AN=56;BaseQRankSum=8.963;DP=757;FS=41.964;HRun=0;HaplotypeScore=383.0592;InbreedingCoeff=-0.3994;MQ=35.14;MQ0=19;MQRankSum=-7.610;QD=4.12;ReadPosRankSum=4.557;VQSLOD=0.9437;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:64.77:0,65,816	0/1:4,4:8:9.91:10,0,17	0/0:58,0:22:63.14:0,63,1173	0/0:55,1:19:51.17:0,51,1023	0/0:26,0:26:44.83:0,45,941	0/1:10,1:10:11.14:39,0,11	0/1:29,0:28:5.90:6,0,551	0/1:18,3:17:20.34:20,0,314	0/0:27,2:26:13.69:0,14,154	0/1:33,5:35:99:314,0,936	0/0:29,2:31:12.35:0,12,229	0/1:22,3:24:72.91:186,0,73	0/1:35,0:33:60.17:60,0,483	0/1:30,1:30:99:154,0,337	0/1:24,4:27:45.06:184,0,45	0/1:32,2:34:99:149,0,553	0/1:8,3:10:45.77:46,0,106	0/1:6,2:8:92.85:114,0,93	0/1:26,0:17:8.84:9,0,672	0/0:28,1:29:8.61:0,9,97	0/0:28,0:25:1.96:0,2,71	0/0:25,2:27:12.04:0,12,515	0/0:22,1:23:20.46:0,20,226	0/0:27,1:27:32.93:0,33,721	0/1:28,2:30:99:199,0,142	0/0:17,1:17:3.65:0,4,339	0/1:20,3:20:99:177,0,259	0/1:11,0:11:5.38:5,0,169
chr10	63445727	.	TATAC	T	904.10	PASS	AB=0.988;AC=16;AF=0.286;AN=56;BaseQRankSum=9.873;DP=748;FS=60.016;HRun=0;HaplotypeScore=403.6519;InbreedingCoeff=-0.0904;MQ=34.89;MQ0=18;MQRankSum=-5.620;QD=2.67;ReadPosRankSum=5.210;VQSLOD=0.0219;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:35:50.07:0,50,1006	0/1:8,0:8:16.13:16,0,68	0/0:54,0:19:43.19:0,43,1367	0/0:55,0:18:51.17:0,51,1147	0/0:24,0:24:38.43:0,38,1051	1/1:8,0:7:5.92:40,6,0	0/1:30,0:30:19.61:20,0,505	0/0:26,0:21:21.89:0,22,628	0/0:29,0:26:30.65:0,31,441	0/1:32,0:32:99:112,0,702	0/0:31,0:31:7.41:0,7,242	0/1:25,0:24:40.57:140,0,41	0/1:33,0:31:41.80:42,0,742	0/1:36,0:35:99:125,0,334	1/1:25,1:26:22.65:143,23,0	0/1:35,1:36:99:142,0,465	0/0:12,0:11:15.26:0,15,249	0/1:9,1:10:2.25:2,0,335	0/0:23,0:16:8.41:0,8,638	0/1:29,0:29:5.56:6,0,59	0/0:19,3:18:4.67:0,5,82	0/0:29,1:30:16.02:0,16,625	0/0:22,0:22:19.96:0,20,304	0/0:25,0:24:20.40:0,20,504	0/1:30,1:31:99:126,0,140	0/0:18,1:18:3.61:0,4,469	0/1:22,0:19:85.98:86,0,204	0/1:13,0:13:65.03:65,0,173
chr10	63445729	.	TAC	T	1119.99	PASS	AB=0.984;AC=17;AF=0.304;AN=56;BaseQRankSum=10.178;DP=723;FS=50.026;HRun=0;HaplotypeScore=378.9563;InbreedingCoeff=-0.1618;MQ=35.07;MQ0=18;MQRankSum=-7.154;QD=3.29;ReadPosRankSum=5.071;VQSLOD=1.1051;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:33:49.88:0,50,732	0/1:8,0:8:14.96:15,0,62	0/0:53,0:18:54.07:0,54,888	0/0:52,0:17:47.90:0,48,722	0/0:23,0:23:38.51:0,39,735	1/1:7,0:6:5.96:42,6,0	0/1:30,0:30:14.43:14,0,352	0/1:26,0:21:32.29:32,0,400	0/0:29,0:25:22.97:0,23,344	0/1:29,1:30:99:270,0,365	0/0:29,0:29:7.61:0,8,165	0/1:24,1:24:14.04:155,0,14	0/0:32,0:30:25.44:0,25,630	0/1:34,1:34:99:123,0,187	1/1:24,0:24:22.59:149,23,0	0/1:36,0:36:99:134,0,228	0/0:11,0:10:1.25:0,1,171	0/1:10,0:10:36.21:36,0,199	0/0:23,0:16:4.48:0,4,353	0/1:27,0:27:21.74:22,0,35	0/0:22,0:18:2.48:0,2,47	0/0:30,0:30:33.01:0,33,425	0/0:22,0:22:19.99:0,20,225	0/0:23,0:22:20.41:0,20,332	0/1:30,1:31:73.64:126,0,74	0/1:19,0:18:4.98:5,0,379	0/1:21,0:18:79.01:113,0,79	0/1:10,1:11:45.40:45,0,165
chr10	63445730	.	ACG	A	2586.03	PASS	AB=0.750;AC=21;AF=0.375;AN=56;BaseQRankSum=7.956;DP=709;FS=43.717;HRun=0;HaplotypeScore=369.5301;InbreedingCoeff=-0.1903;MQ=35.17;MQ0=17;MQRankSum=-5.610;QD=6.51;ReadPosRankSum=4.644;VQSLOD=1.3743;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:47.78:0,48,648	0/1:4,3:8:32.73:33,0,67	0/0:54,0:19:53.87:0,54,762	0/0:50,0:17:34.82:0,35,625	0/0:23,0:23:38.31:0,38,703	1/1:4,3:6:6.02:78,6,0	0/1:21,8:29:43.60:44,0,165	0/1:19,6:21:99:139,0,391	0/0:27,0:26:25.06:0,25,313	0/1:14,15:29:99:592,0,173	0/0:10,16:29:7.49:0,7,109	1/1:10,12:22:10.80:279,11,0	0/1:26,0:30:42.08:42,0,508	0/1:13,21:33:65.45:237,0,65	1/1:10,14:24:23.08:282,23,0	0/1:19,16:36:51.96:291,0,52	0/1:9,2:10:19.15:19,0,137	0/1:7,2:9:51.86:52,0,120	0/1:21,2:16:33.83:34,0,138	0/1:13,11:26:12.07:41,0,12	0/0:19,0:15:0.99:0,1,21	0/0:22,0:30:10.42:0,10,334	0/0:15,1:22:19.93:0,20,218	0/0:19,0:21:20.11:0,20,172	0/1:9,17:30:9.35:277,0,9	0/1:14,3:18:61.38:61,0,331	0/1:10,10:17:19.25:235,0,19	0/1:10,0:11:22.65:23,0,179
chr10	63445731	.	C	CGT	2642.20	PASS	AB=0.820;AC=15;AF=0.268;AN=56;BaseQRankSum=-3.193;DP=724;FS=5.597;HRun=0;HaplotypeScore=381.9889;InbreedingCoeff=0.1905;MQ=34.69;MQ0=17;MQRankSum=-2.995;QD=9.90;ReadPosRankSum=-3.485;VQSLOD=1.8094;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:30,4:34:70.22:70,0,133	1/1:10,2:12:2.10:94,2,0	0/0:55,0:19:11.49:0,11,315	0/0:50,2:15:23.02:0,23,279	0/0:17,6:23:15.76:0,16,242	0/0:7,0:6:1.55:0,2,4	0/0:29,0:29:6.67:0,7,40	0/1:24,4:23:19.17:496,0,19	0/1:22,10:26:2.70:250,0,3	0/0:29,0:29:63.76:0,64,385	0/0:29,0:29:5.89:0,6,49	0/0:23,0:22:24.44:0,24,143	0/1:18,14:30:49.13:556,0,49	0/0:34,0:33:18.77:0,19,106	0/0:24,0:24:23.17:0,23,130	0/0:34,0:34:16.54:0,17,131	0/1:8,3:10:1.41:105,0,1	0/1:8,1:9:37.38:70,0,37	0/0:21,0:15:14.74:0,15,107	0/0:26,0:26:2.26:0,2,8	0/1:19,0:15:0.09:0,0,0	0/1:16,14:30:66.38:400,0,66	1/1:9,13:22:18.06:294,18,0	0/0:17,4:20:8.88:0,9,89	0/0:30,0:30:3.04:0,3,129	0/1:18,0:24:49.57:289,0,50	0/0:20,0:17:20.96:0,21,186	1/1:7,0:13:9.54:174,10,0
chr10	63445740	.	GTGTATA	G	712.49	PASS	AB=0.942;AC=17;AF=0.304;AN=56;BaseQRankSum=7.873;DP=747;FS=38.558;HRun=0;HaplotypeScore=414.4836;InbreedingCoeff=0.3566;MQ=31.74;MQ0=22;MQRankSum=-2.225;QD=2.42;ReadPosRankSum=6.019;VQSLOD=0.9561;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:38.11:0,38,1074	0/0:16,0:16:16.13:0,16,378	0/0:59,0:19:57.17:0,57,1340	0/0:58,0:17:42.12:0,42,1174	0/0:27,0:27:36.06:0,36,1187	1/1:10,0:9:5.93:50,6,0	0/1:23,0:23:36.95:37,0,58	0/0:34,0:29:61.26:0,61,1236	0/0:31,0:24:26.29:0,26,542	0/1:27,2:31:99:158,0,350	0/0:26,1:27:5.60:0,6,95	0/1:19,2:20:26.78:70,0,27	0/1:30,1:30:64.06:64,0,726	1/1:33,0:32:10.97:69,11,0	1/1:23,4:28:6.31:96,6,0	1/1:29,1:30:21.30:142,21,0	0/0:11,0:10:16.66:0,17,345	0/0:11,0:11:26.98:0,27,385	0/1:19,0:13:13.56:43,0,14	0/0:21,2:24:5.77:0,6,55	0/1:20,0:14:0.25:0,0,0	0/0:39,0:39:20.85:0,21,713	0/0:22,0:22:17.44:0,17,387	0/0:17,0:16:2:0,2,41	1/1:27,1:28:13.30:101,13,0	0/0:29,0:27:52.08:0,52,1325	0/1:17,2:16:55.16:55,0,145	0/0:16,0:16:18.22:0,18,623
chr10	63445750	.	A	ATGTG	3189.76	PASS	AB=0.953;AC=24;AF=0.429;AN=56;BaseQRankSum=-4.795;DP=809;FS=0.000;HRun=0;HaplotypeScore=425.6131;InbreedingCoeff=0.2529;MQ=30.28;MQ0=24;MQRankSum=1.158;QD=7.54;ReadPosRankSum=-4.890;VQSLOD=0.4969;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:17,18:35:35.94:782,36,0	0/1:6,8:14:22.76:363,0,23	0/0:56,0:19:21.07:0,21,337	0/0:57,0:16:18.26:0,18,328	1/1:14,17:31:23.79:452,24,0	1/1:11,0:10:4.10:12,4,0	0/0:16,0:15:4.51:0,5,42	0/1:46,6:44:58.67:562,0,59	1/1:18,7:25:23.44:421,23,0	0/0:34,0:34:59.72:0,60,630	1/1:28,0:28:2.93:8,3,0	0/1:21,0:20:5.07:5,0,151	0/0:33,0:32:33.86:0,34,435	0/0:33,0:32:2.84:0,3,111	0/1:29,0:29:20.37:20,0,60	0/1:30,0:30:0.95:1,0,138	1/1:14,4:17:7.68:332,8,0	1/1:7,1:8:3.98:217,4,0	0/0:15,0:6:3.01:0,3,33	0/0:30,0:30:4.80:0,5,29	0/1:20,0:12:0.09:0,0,0	0/0:51,0:52:43.71:0,44,422	0/0:28,0:27:13.02:0,13,120	0/1:17,0:16:0.01:0,0,0	0/0:31,0:31:10.37:0,10,93	0/1:40,0:37:99:162,0,339	0/1:22,0:18:8.49:8,0,129	0/1:15,0:16:12.23:12,0,157
chr10	63445777	.	A	ATG	9149.62	PASS	AB=0.875;AC=30;AF=0.536;AN=56;BaseQRankSum=7.242;DP=1037;FS=1.597;HRun=0;HaplotypeScore=487.0316;InbreedingCoeff=0.5511;MQ=34.95;MQ0=34;MQRankSum=-7.294;QD=15.27;ReadPosRankSum=1.087;VQSLOD=4.4717;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:42:51.93:0,52,352	0/0:18,0:18:35.89:0,36,422	0/0:66,0:27:49.88:0,50,527	0/0:69,0:19:26.03:0,26,321	0/0:19,0:32:40.72:0,41,333	1/1:4,16:18:36.12:566,36,0	1/1:13,9:21:11.92:187,12,0	0/0:86,0:74:99:0,174,2133	0/1:25,2:23:78.33:78,0,130	1/1:18,34:51:99:1987,129,0	1/1:13,23:36:8.91:121,9,0	1/1:7,18:24:33.06:539,33,0	0/1:44,0:44:26.09:26,0,229	1/1:12,21:32:24.55:392,25,0	0/1:11,19:30:7.46:410,0,7	1/1:10,19:28:42.13:669,42,0	0/0:24,0:23:42.48:0,42,543	0/0:15,0:15:32.40:0,32,400	0/1:20,2:12:23.07:106,0,23	1/1:14,22:36:12.02:184,12,0	0/1:25,9:26:11.19:11,0,55	0/0:59,0:59:23.75:0,24,284	0/1:47,0:46:41.97:114,0,42	0/0:23,0:20:5.19:0,5,42	1/1:14,27:41:45.14:739,45,0	1/1:18,29:53:99:1932,135,0	1/1:10,13:19:26.93:411,27,0	1/1:4,15:20:45.53:678,46,0
chr10	63445800	.	A	ATG	11358.06	PASS	AB=0.840;AC=33;AF=0.589;AN=56;BaseQRankSum=5.479;DP=1195;FS=0.000;HRun=0;HaplotypeScore=502.0065;InbreedingCoeff=0.4798;MQ=38.52;MQ0=30;MQRankSum=-5.497;QD=14.41;ReadPosRankSum=-2.075;VQSLOD=3.9949;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:41:18.85:0,19,346	0/0:13,0:17:17.46:0,17,183	0/0:72,0:39:78.86:0,79,778	0/0:67,0:25:56.05:0,56,591	0/0:23,0:31:38.87:0,39,459	1/1:6,23:27:51.16:721,51,0	1/1:12,16:26:32.99:524,33,0	0/0:94,0:102:99:0,162,1667	0/1:9,8:23:40.08:169,0,40	1/1:24,44:67:99:2605,167,0	1/1:9,26:35:39.03:464,39,0	1/1:10,21:29:35.92:469,36,0	0/1:40,3:49:99:208,0,611	1/1:13,26:37:39.32:526,39,0	1/1:15,26:40:59.49:738,59,0	1/1:12,24:34:56.38:794,56,0	0/0:24,0:26:48.62:0,49,516	0/0:20,0:21:41.84:0,42,501	1/1:12,5:8:18.04:277,18,0	1/1:12,27:39:33.07:449,33,0	1/1:10,45:49:27.08:443,27,0	0/1:35,8:65:99:101,0,316	0/1:30,6:41:99:354,0,368	0/1:31,3:34:32.61:33,0,173	1/1:15,29:44:65.68:810,66,0	0/1:26,13:54:99:508,0,687	1/1:13,14:23:54.06:763,54,0	0/1:8,10:20:99:403,0,172
chr10	63445820	.	CGT	C	2373.24	PASS	AB=0.755;AC=13;AF=0.232;AN=56;BaseQRankSum=8.892;DP=1109;FS=34.004;HRun=0;HaplotypeScore=447.0261;InbreedingCoeff=-0.2957;MQ=41.26;MQ0=26;MQRankSum=-9.975;QD=5.68;ReadPosRankSum=3.432;VQSLOD=1.8619;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:14.01:0,14,410	0/1:11,0:11:3.80:4,0,67	0/0:63,0:25:29.73:0,30,352	0/0:65,0:23:47.98:0,48,681	0/0:31,0:30:51.16:0,51,819	0/1:16,11:26:85.21:85,0,289	0/0:27,3:29:47.85:0,48,807	0/0:77,0:73:99:0,165,2297	0/0:31,0:28:29.08:0,29,572	0/1:35,34:67:99:1144,0,962	0/1:19,14:33:99:119,0,201	0/1:22,6:26:13.78:14,0,330	0/0:49,0:46:58.95:0,59,1188	0/1:28,11:37:14.83:15,0,330	0/0:33,10:41:9.36:0,9,671	0/1:20,10:28:99:105,0,505	0/0:30,0:29:41.30:0,41,782	0/0:24,0:23:63.13:0,63,971	0/1:13,6:15:79.65:80,0,372	0/1:17,18:35:91.58:92,0,229	0/0:61,6:60:63.18:0,63,1006	0/0:59,0:60:42.59:0,43,673	0/0:38,0:37:66.23:0,66,1113	0/0:42,0:38:30.10:0,30,492	0/1:20,19:39:50.01:50,0,327	0/1:35,13:44:99:493,0,473	0/1:16,6:21:99:111,0,400	0/1:11,7:18:99:214,0,122
chr10	63445851	.	ATG	A	837.42	PASS	AB=0.942;AC=26;AF=0.520;AN=50;BaseQRankSum=1.169;DP=1002;FS=1.417;HRun=0;HaplotypeScore=345.2990;InbreedingCoeff=0.1136;MQ=40.28;MQ0=37;MQRankSum=2.864;QD=1.18;ReadPosRankSum=0.411;VQSLOD=1.7082;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:30,8:35:14.46:155,14,0	1/1:5,2:7:5.91:66,6,0	./.	./.	1/1:24,2:25:5.85:66,6,0	0/0:22,0:21:9.01:0,9,114	0/1:37,1:36:5.90:6,0,93	1/1:65,0:51:2.97:21,3,0	0/1:27,0:27:15.54:16,0,81	0/0:58,0:55:15.13:0,15,338	0/0:25,0:25:9.03:0,9,134	0/1:36,1:35:23.99:24,0,34	0/1:44,0:45:3.48:12,0,3	0/0:42,1:41:10.40:0,10,119	0/1:42,2:43:6.03:6,0,310	0/1:26,3:28:85.47:85,0,165	1/1:26,4:32:29.55:258,30,0	1/1:21,4:24:17.42:167,17,0	./.	0/0:29,1:31:1.05:0,1,137	0/1:78,5:75:44.64:45,0,582	1/1:44,0:47:1.03:4,1,0	1/1:30,0:30:1.25:3,1,0	0/1:40,0:38:0.15:0,0,0	0/1:40,3:43:44.90:45,0,254	0/1:38,0:35:11.87:12,0,16	0/0:30,0:29:32.63:0,33,353	0/0:15,0:15:2.94:0,3,18
chr10	63447906	.	AG	A	7217.94	PASS	AB=0.960;AC=51;AF=0.944;AN=54;BaseQRankSum=-3.322;DP=513;FS=4.510;HRun=1;HaplotypeScore=41.4617;InbreedingCoeff=0.4896;MQ=40.59;MQ0=40;MQRankSum=2.989;QD=14.97;ReadPosRankSum=-1.072;VQSLOD=3.9679;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:37,0:36:77.82:532,78,0	1/1:9,0:9:26.71:187,27,0	0/1:23,1:2:0.89:1,0,7	0/0:29,1:5:0.94:0,1,11	1/1:16,0:12:27.38:183,27,0	1/1:16,0:14:38.71:287,39,0	1/1:21,0:14:38.56:274,39,0	1/1:27,0:24:62.10:397,62,0	1/1:16,0:15:37.71:238,38,0	1/1:23,6:26:65.49:483,65,0	1/1:20,0:18:44.51:307,45,0	1/1:18,0:18:35.65:256,36,0	1/1:3,0:3:5.93:40,6,0	1/1:22,0:21:56.14:392,56,0	1/1:12,0:11:20.70:151,21,0	1/1:17,0:17:44.66:325,45,0	1/1:39,0:36:77.30:556,77,0	1/1:26,0:24:62.53:449,63,0	1/1:23,0:18:53.11:413,53,0	1/1:14,0:13:35.77:271,36,0	1/1:8,0:7:15.47:102,15,0	./.	1/1:3,0:1:3:26,3,0	1/1:9,0:8:6.37:63,6,0	1/1:13,0:13:35.68:265,36,0	1/1:8,14:21:62.11:436,62,0	1/1:27,0:26:66.21:459,66,0	1/1:11,0:9:17.82:126,18,0
chr10	63452156	.	GACACACAC	G	1184.45	PASS	AB=0.875;AC=27;AF=0.519;AN=52;BaseQRankSum=3.314;DP=497;FS=9.336;HRun=0;HaplotypeScore=119.6042;InbreedingCoeff=0.1498;MQ=62.49;MQ0=16;MQRankSum=-4.734;QD=3.96;ReadPosRankSum=-1.894;VQSLOD=1.3242;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:30:15.03:0,15,348	0/0:4,0:9:5.91:0,6,81	./.	./.	0/0:16,0:15:15.02:0,15,379	1/1:5,6:11:3.01:36,3,0	1/1:16,4:20:5.62:76,6,0	0/0:21,0:21:9.40:0,9,64	0/1:16,0:24:48.47:51,0,48	0/1:19,0:18:11.49:11,0,61	1/1:5,4:9:2.92:17,3,0	1/1:10,1:11:9.03:169,9,0	1/1:8,1:12:8.83:94,9,0	1/1:14,4:15:5.93:91,6,0	0/0:17,6:23:4.86:0,5,27	1/1:11,9:21:16.82:262,17,0	0/0:13,0:18:29.66:0,30,433	0/0:12,0:13:15.50:0,16,287	0/1:16,0:17:15.48:58,0,15	0/1:15,3:18:6.07:6,0,56	0/1:24,0:23:13.91:14,0,55	0/0:7,0:9:2.63:0,3,24	1/1:14,0:18:2.81:31,3,0	0/1:9,0:15:4.36:4,0,65	0/1:9,5:14:9.24:9,0,28	0/1:17,0:20:17.19:170,0,17	1/1:3,10:13:8.90:222,9,0	0/1:15,0:14:21.17:28,0,21
chr10	63452530	.	G	GT	912.32	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=-5.797;DP=620;FS=2.152;HRun=8;HaplotypeScore=61.9310;InbreedingCoeff=0.6776;MQ=64.60;MQ0=0;MQRankSum=1.625;QD=17.89;ReadPosRankSum=-1.792;VQSLOD=3.2667;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,147,1335	0/0:11,0:12:32.05:0,32,281	0/0:22,0:13:13.86:0,14,137	0/1:15,0:12:13.42:13,0,69	0/0:11,1:12:0.47:0,0,245	0/0:25,0:25:60.02:0,60,549	0/0:21,0:21:51.03:0,51,467	0/0:28,0:28:44.27:0,44,458	0/0:20,0:20:54:0,54,489	0/0:23,0:23:68.99:0,69,620	0/0:18,0:18:42.01:0,42,384	0/0:26,0:26:63.02:0,63,572	0/0:10,0:10:18:0,18,164	0/0:22,0:22:57.01:0,57,516	0/0:30,0:30:78.02:0,78,709	0/0:25,0:25:72.04:0,72,659	0/0:30,0:30:90.05:0,90,824	0/0:22,0:22:60.03:0,60,550	0/0:22,0:22:41.98:0,42,380	0/0:27,0:27:68.77:0,69,619	0/0:19,0:19:48.01:0,48,435	0/0:14,0:14:36.01:0,36,329	0/0:18,0:18:48.01:0,48,434	0/0:24,0:24:66.04:0,66,604	0/0:14,0:14:7.63:0,8,323	1/1:3,20:23:57.15:646,57,0	0/0:29,0:29:81.04:0,81,740	1/1:0,13:13:33.10:381,33,0
chr10	63456755	.	CAT	C	3582.37	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-0.022;DP=615;FS=1.997;HRun=0;HaplotypeScore=95.0133;InbreedingCoeff=0.9901;MQ=90.89;MQ0=0;MQRankSum=-0.828;QD=40.71;ReadPosRankSum=3.877;VQSLOD=5.7236;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:31:72.44:0,72,1486	0/0:4,0:4:12.04:0,12,217	0/0:27,0:27:57.46:0,57,1308	0/0:27,0:26:63.94:0,64,1180	0/0:21,0:21:63.22:0,63,1158	0/0:20,0:20:57.20:0,57,1078	0/0:22,0:22:63.18:0,63,1110	0/0:29,0:29:81.26:0,81,1456	0/0:31,0:31:87.30:0,87,1610	0/0:28,0:28:81.28:0,81,1521	0/0:16,0:16:48.16:0,48,909	0/0:20,0:20:57.17:0,57,1020	1/1:0,20:20:54.18:826,54,0	0/0:20,0:20:60.19:0,60,1103	0/0:23,0:23:69.24:0,69,1274	0/0:29,0:29:87.30:0,87,1631	0/0:22,0:22:60.21:0,60,1113	0/0:20,0:20:60.15:0,60,1050	0/0:19,0:19:54.17:0,54,974	0/0:20,0:20:60.21:0,60,1119	0/0:25,0:25:72.25:0,72,1352	1/1:0,11:11:27.09:413,27,0	1/1:0,24:24:66.22:1011,66,0	1/1:2,31:33:87.30:1332,87,0	0/0:15,0:15:42.14:0,42,795	0/0:24,0:24:69.24:0,69,1302	0/0:27,0:27:78.23:0,78,1386	0/0:7,0:7:21.07:0,21,398
chr10	63456915	.	C	CTT	2936.96	PASS	AB=0.710;AC=33;AF=0.589;AN=56;BaseQRankSum=0.032;DP=571;FS=3.429;HRun=14;HaplotypeScore=95.4186;InbreedingCoeff=0.5192;MQ=62.27;MQ0=19;MQRankSum=-2.636;QD=8.02;ReadPosRankSum=-1.159;VQSLOD=1.4987;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:43:35.92:0,36,404	0/0:4,0:8:13.86:0,14,67	0/0:17,0:11:4.33:0,4,38	0/0:15,0:10:3.98:0,4,31	0/0:15,0:16:14.44:0,14,158	1/1:3,0:11:16.60:58,17,0	0/1:5,1:19:28.32:88,0,28	0/0:20,0:33:21.14:0,21,157	0/0:22,0:22:33.30:0,33,244	1/1:14,14:29:42.02:473,42,0	1/1:4,10:14:25.80:277,26,0	0/1:19,1:22:18.80:92,0,19	1/1:2,0:9:9.01:86,9,0	1/1:11,0:14:12.15:46,12,0	1/1:2,0:8:2.37:9,2,0	0/1:7,0:15:7.16:44,0,7	0/0:9,0:21:32.54:0,33,140	0/0:8,0:21:20.69:0,21,112	0/1:6,0:24:22.60:111,0,23	1/1:9,1:27:12.42:156,12,0	1/1:4,0:5:5.17:22,5,0	1/1:5,0:16:4.82:34,5,0	1/1:15,3:20:35.78:298,36,0	1/1:14,0:12:16.47:124,16,0	0/1:21,0:24:65.34:65,0,70	1/1:13,18:34:37.37:494,37,0	1/1:9,0:30:40.73:175,41,0	1/1:1,14:19:41.48:486,41,0
chr10	63457165	.	GT	G	9632.68	PASS	AB=0.962;AC=55;AF=0.982;AN=56;BaseQRankSum=1.407;DP=607;FS=0.000;HRun=1;HaplotypeScore=115.3420;InbreedingCoeff=-0.0215;MQ=84.83;MQ0=0;MQRankSum=-2.506;QD=15.87;ReadPosRankSum=3.419;VQSLOD=5.0420;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:43,0:43:99:715,118,0	1/1:3,0:3:8.80:53,9,0	1/1:13,0:13:34.45:152,34,0	0/1:24,1:25:30.71:293,0,31	1/1:16,0:16:41.09:248,41,0	1/1:10,0:10:29.28:172,29,0	1/1:21,0:21:52.63:310,53,0	1/1:33,0:33:91.49:469,91,0	1/1:19,0:19:52.95:337,53,0	1/1:16,1:17:48.70:291,49,0	1/1:14,0:14:41.22:261,41,0	1/1:20,0:20:49.86:298,50,0	1/1:22,0:22:64.56:391,65,0	1/1:29,0:29:79.35:492,79,0	1/1:29,0:29:82.18:502,82,0	1/1:21,0:21:55.70:337,56,0	1/1:26,0:26:52.34:415,52,0	1/1:26,0:26:70.28:420,70,0	1/1:22,0:22:37.52:283,38,0	1/1:21,0:21:58.54:343,59,0	1/1:47,0:47:99:749,111,0	1/1:4,1:5:11.78:74,12,0	1/1:20,0:20:55.73:335,56,0	1/1:30,0:30:56.41:448,56,0	1/1:15,0:15:38.13:231,38,0	1/1:23,0:23:60.54:334,61,0	1/1:23,0:23:64.64:396,65,0	1/1:13,1:14:41.36:286,41,0
chr10	63458193	.	TTC	T	334.71	PASS	AB=0.955;AC=12;AF=0.222;AN=54;BaseQRankSum=0.600;DP=568;FS=28.155;HRun=0;HaplotypeScore=105.7458;InbreedingCoeff=0.1132;MQ=60.38;MQ0=12;MQRankSum=4.295;QD=1.50;ReadPosRankSum=2.462;VQSLOD=-0.0991;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:28,9:40:23.73:223,24,0	0/0:10,0:9:2.99:0,3,23	./.	0/1:14,0:10:0:0,0,0	1/1:18,3:23:11.82:123,12,0	0/0:12,0:12:12.03:0,12,152	0/1:11,1:12:14.47:14,0,191	0/0:34,0:31:3.84:0,4,21	0/0:15,0:15:6.01:0,6,66	0/0:18,0:18:15.02:0,15,166	0/0:10,0:10:3.01:0,3,45	0/1:21,1:22:11.48:11,0,214	0/0:14,0:14:12:0,12,115	0/0:13,0:12:12.04:0,12,159	0/1:24,2:26:50.05:50,0,116	0/0:12,0:19:0:0,0,0	0/1:25,1:25:5.50:5,0,215	0/0:22,0:21:23.20:0,23,223	0/1:18,0:17:15.93:16,0,141	0/0:23,0:22:18.03:0,18,222	0/0:34,0:34:8.98:0,9,90	0/0:18,0:18:11.51:0,12,113	0/0:25,0:24:15.01:0,15,168	0/0:13,0:27:5.77:0,6,48	0/1:16,1:16:14.46:14,0,186	0/0:18,0:17:23.99:0,24,256	0/1:23,2:25:20.52:21,0,111	0/0:10,0:10:2.90:0,3,16
chr10	63459101	.	A	AATC	15824.71	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-9.546;DP=460;FS=5.520;HRun=0;HaplotypeScore=65.8005;InbreedingCoeff=0.9704;MQ=59.33;MQ0=0;MQRankSum=-2.738;QD=45.47;ReadPosRankSum=0.461;VQSLOD=6.4599;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:30.10:0,30,497	1/1:0,6:6:15.05:342,15,0	0/0:5,0:5:12.04:0,12,168	0/0:6,0:5:14.90:0,15,188	0/0:19,0:19:42.10:0,42,680	1/1:4,12:17:42.14:904,42,0	1/1:0,21:23:45.15:1018,45,0	1/1:4,19:27:66.16:1316,66,0	0/0:17,0:17:45.12:0,45,711	1/1:2,12:17:45.04:808,45,0	1/1:3,13:17:32.98:678,33,0	1/1:2,18:21:42.08:916,42,0	0/0:16,0:16:48.16:0,48,789	1/1:0,17:18:39.13:893,39,0	1/1:1,20:22:48.16:1103,48,0	1/1:1,14:15:27.09:622,27,0	1/1:1,24:25:63.22:1434,63,0	1/1:0,19:21:42.08:905,42,0	1/1:2,18:22:57.08:1081,57,0	1/1:1,14:15:30.03:608,30,0	1/1:3,14:17:14.57:309,15,0	0/0:14,0:14:30.10:0,30,495	0/0:5,0:5:15.01:0,15,220	0/0:18,0:18:51.17:0,51,869	1/1:1,9:10:11.97:225,12,0	1/1:5,10:15:39.13:803,39,0	1/1:1,35:35:78.20:1741,78,0	1/1:4,0:4:9:117,9,0
chr10	63459111	.	A	AT	364.14	PASS	AB=0.950;AC=5;AF=0.089;AN=56;BaseQRankSum=0.294;DP=469;FS=16.577;HRun=9;HaplotypeScore=102.1858;InbreedingCoeff=0.7230;MQ=63.10;MQ0=0;MQRankSum=-4.444;QD=9.34;ReadPosRankSum=-3.344;VQSLOD=0.1561;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:34.06:0,34,277	0/0:7,0:7:14.98:0,15,128	0/0:8,0:8:17.92:0,18,145	0/0:8,0:6:11.66:0,12,84	0/1:18,1:19:2.17:2,0,259	0/0:16,0:16:41.21:0,41,344	0/0:23,0:23:41.63:0,42,346	0/0:33,0:33:77.95:0,78,673	0/0:14,0:14:29.81:0,30,248	0/0:15,0:15:41.98:0,42,363	0/0:14,0:14:8.25:0,8,253	0/0:23,0:23:50.97:0,51,441	0/0:16,0:16:29.94:0,30,260	0/0:20,0:20:38.01:0,38,335	0/0:25,0:25:59.97:0,60,519	0/0:15,0:15:35.99:0,36,311	0/0:24,0:24:50.92:0,51,440	0/0:21,0:21:44.97:0,45,384	0/0:23,0:23:40.22:0,40,474	0/0:15,0:15:35.97:0,36,308	0/0:12,1:13:17.74:0,18,155	0/0:12,0:12:24.65:0,25,210	0/0:6,0:6:10.21:0,10,101	0/0:20,0:20:59.96:0,60,514	0/0:11,0:11:21:0,21,182	1/1:3,13:16:16.07:405,16,0	0/0:33,0:32:77.47:0,77,669	1/1:2,2:4:6.02:66,6,0
chr10	63459726	.	TGCGCGC	T	6078.24	PASS	AB=0.978;AC=40;AF=0.714;AN=56;BaseQRankSum=-6.274;DP=425;FS=0.551;HRun=0;HaplotypeScore=126.7183;InbreedingCoeff=0.3544;MQ=58.33;MQ0=15;MQRankSum=-2.462;QD=16.79;ReadPosRankSum=-0.090;VQSLOD=4.2718;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:19:21.34:188,21,0	0/1:9,0:8:6.04:99,0,6	0/1:10,0:7:22.08:22,0,72	0/1:12,0:8:14.33:80,0,14	1/1:16,0:17:6.56:182,7,0	1/1:8,4:13:18.04:322,18,0	1/1:3,10:12:8.66:161,9,0	1/1:5,0:21:48.05:469,48,0	0/0:14,0:14:15.90:0,16,353	1/1:4,13:16:39.12:775,39,0	1/1:5,9:14:21.07:416,21,0	1/1:3,15:17:3.01:54,3,0	0/1:13,0:13:10.99:11,0,177	1/1:5,3:8:3.01:52,3,0	1/1:7,6:13:9.03:158,9,0	1/1:5,4:9:18.06:343,18,0	1/1:2,0:23:2.88:27,3,0	0/1:20,0:20:60.93:247,0,61	1/1:5,4:9:15.05:304,15,0	1/1:10,9:20:42.12:836,42,0	1/1:28,4:28:24.06:458,24,0	0/0:12,0:14:16.63:0,17,227	0/0:9,0:9:11.52:0,12,67	0/0:22,0:22:22.60:0,23,133	1/1:1,14:14:2.78:53,3,0	0/1:14,1:15:79.84:80,0,675	1/1:12,5:17:42.13:743,42,0	0/0:3,0:3:9.03:0,9,199
chr10	63459760	.	TGTGTGTGTGTGTGTGTGTGTG	T	2820.45	PASS	AB=0.981;AC=31;AF=0.620;AN=50;BaseQRankSum=4.453;DP=426;FS=2.981;HRun=0;HaplotypeScore=242.1888;InbreedingCoeff=0.1850;MQ=34.03;MQ0=37;MQRankSum=-2.477;QD=9.13;ReadPosRankSum=1.353;VQSLOD=2.7654;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:19,0:16:28.99:29,0,116	0/0:8,0:6:9.47:0,9,78	./.	./.	0/0:23,0:21:6.95:0,7,118	1/1:7,2:9:11.07:374,11,0	1/1:14,0:12:1.57:5,2,0	0/1:10,0:8:28.34:28,0,65	0/1:15,0:14:29.35:76,0,29	1/1:20,0:18:16.23:199,16,0	0/1:11,1:10:80.17:326,0,80	1/1:18,0:16:2.04:6,2,0	0/0:15,0:14:22.54:0,23,308	1/1:12,0:12:1.55:4,2,0	1/1:11,0:10:5.04:165,5,0	0/1:11,0:11:1.54:2,0,2	1/1:22,0:20:1.31:35,1,0	0/1:12,0:11:1.57:2,0,284	0/1:9,1:9:64.10:222,0,64	1/1:20,1:21:18.06:420,18,0	0/1:27,0:22:0.56:19,0,1	0/0:19,0:16:10.07:0,10,146	0/1:11,0:10:0.01:0,0,0	0/0:20,0:19:3.01:0,3,44	1/1:23,0:22:5.23:44,5,0	1/1:18,1:19:25.52:645,26,0	1/1:11,2:12:1.99:366,2,0	./.
chr10	63459774	.	TGTGTGTG	T	3106.42	PASS	AB=0.952;AC=37;AF=0.771;AN=48;BaseQRankSum=0.949;DP=374;FS=2.975;HRun=0;HaplotypeScore=160.8742;InbreedingCoeff=0.3913;MQ=33.38;MQ0=40;MQRankSum=-1.220;QD=11.13;ReadPosRankSum=1.923;VQSLOD=2.9405;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:17,2:17:6.29:112,6,0	./.	0/0:26,0:5:12.03:0,12,140	0/0:27,0:6:18.04:0,18,182	0/1:11,5:15:0.01:0,0,0	1/1:5,0:5:9.03:164,9,0	1/1:13,0:9:3.01:38,3,0	1/1:14,0:8:18.06:229,18,0	1/1:13,0:12:9.97:134,10,0	1/1:14,0:12:36.12:458,36,0	0/1:8,0:7:5.31:152,0,5	1/1:13,0:11:3.48:39,3,0	1/1:15,0:14:3.23:161,3,0	./.	1/1:13,0:12:6.02:101,6,0	./.	1/1:18,0:16:5.31:47,5,0	0/1:11,0:10:77.06:257,0,77	1/1:13,0:12:26.68:336,27,0	1/1:12,0:12:12.04:203,12,0	0/0:21,0:15:1.73:0,2,6	1/1:17,0:14:5.81:91,6,0	0/1:10,0:9:0.01:0,0,0	0/1:18,0:17:0:0,0,0	1/1:16,0:15:3.01:39,3,0	1/1:14,0:14:38.85:432,39,0	1/1:7,0:6:15.05:241,15,0	./.
chr10	63459780	.	TG	T	2772.79	PASS	AB=0.764;AC=37;AF=0.804;AN=46;BaseQRankSum=1.519;DP=342;FS=4.660;HRun=2;HaplotypeScore=144.2131;InbreedingCoeff=0.3109;MQ=36.13;MQ0=34;MQRankSum=-1.360;QD=10.87;ReadPosRankSum=3.455;VQSLOD=2.2487;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:9,7:14:5.33:62,5,0	./.	0/0:28,0:7:18.04:0,18,205	0/1:29,2:9:32.96:33,0,186	0/1:7,5:11:0:0,0,0	1/1:2,3:5:8.97:81,9,0	1/1:3,11:10:3.01:38,3,0	1/1:2,10:6:18.06:229,18,0	1/1:1,8:8:8.82:89,9,0	1/1:1,12:12:36.12:457,36,0	1/1:4,4:7:11.67:97,12,0	1/1:1,11:10:3.01:38,3,0	1/1:3,7:10:14.96:169,15,0	./.	1/1:1,11:11:5.99:59,6,0	./.	1/1:9,3:11:5.72:74,6,0	0/1:5,6:10:13.21:278,0,13	1/1:3,9:11:28.61:331,29,0	1/1:4,8:12:11.98:119,12,0	0/0:4,12:12:1.82:0,2,5	1/1:10,5:12:5.87:35,6,0	./.	0/0:7,8:14:0.47:0,0,1	1/1:1,15:15:2.85:38,3,0	1/1:2,13:15:41.87:507,42,0	1/1:3,5:7:14.99:157,15,0	./.
chr10	63459781	.	G	GT	2687.90	PASS	AB=0.879;AC=39;AF=0.848;AN=46;BaseQRankSum=1.212;DP=360;FS=6.563;HRun=1;HaplotypeScore=160.7750;InbreedingCoeff=0.3558;MQ=42.47;MQ0=33;MQRankSum=-1.590;QD=9.57;ReadPosRankSum=2.608;VQSLOD=1.4734;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,6:13:5.32:65,5,0	./.	0/0:30,0:9:18.05:0,18,206	0/1:32,0:10:32.96:33,0,187	0/1:12,1:12:0:0,0,0	1/1:6,0:6:7.60:53,8,0	1/1:14,1:11:6.02:73,6,0	1/1:11,1:6:18.06:229,18,0	1/1:10,0:9:8.52:95,9,0	1/1:13,0:12:36.12:457,36,0	1/1:9,0:8:10.45:78,10,0	1/1:14,0:12:3.01:38,3,0	1/1:9,2:11:13.28:155,13,0	./.	1/1:13,0:12:5.23:45,5,0	./.	1/1:4,7:11:5.59:76,6,0	1/1:7,3:10:3.90:282,4,0	1/1:11,0:10:26.30:312,26,0	1/1:12,0:12:10.76:91,11,0	0/0:14,2:12:1.73:0,2,5	1/1:8,7:12:4.46:21,4,0	./.	0/1:10,7:16:0:0,0,0	1/1:17,0:16:2.84:38,3,0	1/1:16,0:16:40.83:529,41,0	1/1:8,0:7:13.62:129,14,0	./.
chr10	63459866	.	T	TA	11638.08	PASS	AB=0.818;AC=52;AF=0.963;AN=54;BaseQRankSum=-4.498;DP=427;FS=20.530;HRun=1;HaplotypeScore=259.9476;InbreedingCoeff=-0.0100;MQ=45.01;MQ0=0;MQRankSum=-1.757;QD=27.26;ReadPosRankSum=7.872;VQSLOD=0.7722;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,26:27:54.20:765,54,0	1/1:1,6:7:13.96:205,14,0	1/1:4,1:5:11.91:108,12,0	0/1:4,0:4:30.05:31,0,30	1/1:4,12:16:16.28:220,16,0	1/1:3,19:22:57.12:720,57,0	1/1:3,14:17:36.84:512,37,0	1/1:6,9:14:34.47:456,34,0	1/1:3,7:10:20.22:272,20,0	1/1:2,15:17:46.03:609,46,0	1/1:4,12:15:29.54:398,30,0	1/1:2,22:24:53.20:704,53,0	1/1:4,16:20:48.96:666,49,0	1/1:1,12:13:27.23:370,27,0	1/1:7,11:18:40.73:479,41,0	1/1:0,15:15:42.10:532,42,0	1/1:0,10:10:23.58:324,24,0	1/1:5,9:14:22.30:360,22,0	1/1:7,5:11:27.05:346,27,0	1/1:3,20:23:43.85:609,44,0	0/1:3,4:7:0.52:15,0,1	1/1:5,8:13:21.40:276,21,0	1/1:8,11:19:27.39:353,27,0	1/1:2,11:13:18.15:231,18,0	1/1:6,18:24:44.35:664,44,0	1/1:7,18:25:55.60:763,56,0	1/1:5,16:21:51.09:650,51,0	./.
chr10	63460879	.	T	TTTTTG	2173.56	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=-6.822;DP=651;FS=7.320;HRun=0;HaplotypeScore=118.4413;InbreedingCoeff=0.7832;MQ=74.32;MQ0=1;MQRankSum=-2.183;QD=29.77;ReadPosRankSum=0.740;VQSLOD=3.2217;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:69.74:0,70,1264	0/0:14,0:14:30.05:0,30,466	0/0:22,0:20:27.03:0,27,442	0/1:27,0:25:3.53:4,0,360	0/0:31,0:31:72.23:0,72,1303	0/0:26,0:26:54.16:0,54,942	0/0:22,0:22:51.13:0,51,820	0/0:25,0:25:45.15:0,45,784	0/0:17,0:17:48.16:0,48,869	0/0:23,0:23:51.16:0,51,911	0/0:30,0:30:81.28:0,81,1503	0/0:16,0:16:36.12:0,36,667	0/0:15,0:15:42.13:0,42,755	0/0:17,0:17:48.15:0,48,838	0/0:20,0:20:51.16:0,51,911	0/0:19,0:19:45.13:0,45,782	0/0:27,0:27:66.23:0,66,1224	0/0:20,0:20:51.16:0,51,912	0/0:21,0:21:42.10:0,42,719	0/0:31,0:31:75.24:0,75,1333	0/0:20,0:20:48.07:0,48,784	0/0:24,0:24:63.21:0,63,1144	0/0:21,0:21:37.36:0,37,639	0/0:27,0:27:69.23:0,69,1252	0/0:31,0:31:69.22:0,69,1230	1/1:10,22:34:75.25:2125,75,0	0/0:28,0:28:75.23:0,75,1297	1/1:7,4:12:6.02:160,6,0
chr10	63461504	.	T	TCTGTGAGTAG	29829.24	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-12.155;DP=731;FS=0.000;HRun=0;HaplotypeScore=170.1717;InbreedingCoeff=0.9573;MQ=87.28;MQ0=0;MQRankSum=-15.385;QD=60.88;ReadPosRankSum=0.545;VQSLOD=4.3187;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:87.30:0,87,2584	0/0:4,0:4:9.03:0,9,277	0/0:33,0:33:50.38:0,50,1129	0/0:28,0:28:35.99:0,36,666	0/0:15,0:15:30.07:0,30,691	1/1:1,16:20:39.13:1973,39,0	1/1:3,21:27:42.14:2124,42,0	0/0:32,0:32:60.15:0,60,1387	0/0:35,0:35:87.25:0,87,2405	1/1:4,19:26:44.80:1612,45,0	1/1:3,4:9:6.02:302,6,0	1/1:4,18:27:42.14:2110,42,0	1/1:8,22:38:47.97:2427,48,0	1/1:12,23:40:51.18:2573,51,0	1/1:3,25:32:57.20:2883,57,0	1/1:10,27:39:60.21:3035,60,0	0/0:40,0:40:99:0,105,2898	0/0:16,0:16:36.09:0,36,880	1/1:14,3:23:36.04:967,36,0	1/1:6,12:21:30.03:1383,30,0	1/1:22,21:45:21.01:1055,21,0	1/1:4,8:14:15.05:758,15,0	1/1:4,12:18:15.05:758,15,0	1/1:11,8:23:15.05:754,15,0	1/1:6,22:31:27.09:1366,27,0	1/1:6,10:19:35.03:1172,35,0	1/1:1,20:30:42.14:2120,42,0	1/1:1,6:8:9.03:455,9,0
chr10	63461925	.	GA	G	570.24	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.036;DP=639;FS=6.336;HRun=8;HaplotypeScore=64.0638;InbreedingCoeff=0.9938;MQ=81.30;MQ0=0;MQRankSum=-0.284;QD=21.12;ReadPosRankSum=0.165;VQSLOD=3.8530;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,132,1564	0/0:9,0:9:27.01:0,27,287	0/0:35,0:34:57.84:0,58,650	0/0:25,0:21:38.72:0,39,464	0/0:18,0:18:51.16:0,51,614	0/0:26,0:26:78.17:0,78,888	0/0:24,0:24:63.14:0,63,725	0/0:22,0:22:60.01:0,60,655	1/1:0,27:27:69.11:665,69,0	0/0:20,0:20:56.65:0,57,644	0/0:8,0:8:21.05:0,21,242	0/0:20,0:20:57.15:0,57,664	0/0:24,0:24:69.16:0,69,803	0/0:23,0:23:66.07:0,66,730	0/0:23,0:23:63.19:0,63,760	0/0:35,0:35:96.27:0,96,1134	0/0:38,0:38:99:0,102,1172	0/0:18,0:18:54.14:0,54,627	0/0:14,0:14:42.12:0,42,495	0/0:24,0:24:63.18:0,63,748	0/0:22,0:22:63.19:0,63,760	0/0:21,0:21:54.15:0,54,634	0/0:11,0:11:30.08:0,30,350	0/0:12,0:12:30.08:0,30,350	0/0:26,0:26:66.12:0,66,759	0/0:19,0:19:48.15:0,48,579	0/0:30,0:30:75.19:0,75,868	0/0:16,0:16:42.13:0,42,507
chr10	63463440	.	CT	C	2152.33	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=9.620;DP=675;FS=2.048;HRun=7;HaplotypeScore=65.5738;InbreedingCoeff=0.9984;MQ=67.01;MQ0=8;MQRankSum=1.368;QD=24.18;ReadPosRankSum=0.580;VQSLOD=4.0657;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,102,1278	1/1:0,8:8:24.05:245,24,0	0/0:26,0:16:35.11:0,35,395	0/0:35,0:16:27.21:0,27,285	0/0:36,0:36:99:0,105,1301	0/0:25,0:24:72.23:0,72,905	0/0:17,0:17:45.10:0,45,548	1/1:2,23:25:60.12:607,60,0	0/0:21,0:21:57.18:0,57,717	0/0:28,0:28:69.21:0,69,857	0/0:23,0:23:57.17:0,57,704	0/0:20,0:20:57.16:0,57,703	0/0:13,1:14:36.09:0,36,426	0/0:14,0:14:33.08:0,33,400	0/0:24,0:24:69.22:0,69,867	0/0:20,0:20:54.17:0,54,679	1/1:2,38:40:99:1063,99,0	1/1:0,16:16:39.09:398,39,0	0/0:30,0:30:81.24:0,81,992	0/0:22,0:22:51.16:0,51,642	0/0:26,0:26:72.20:0,72,878	0/0:18,0:18:45.14:0,45,566	0/0:23,0:23:66.20:0,66,817	0/0:9,0:9:24.08:0,24,302	0/0:39,0:39:99:0,105,1319	0/0:25,0:25:69.22:0,69,867	0/0:32,0:30:93.26:0,93,1137	0/0:20,0:20:45.14:0,45,565
chr10	63464787	.	T	TTA	6090.96	PASS	AC=48;AF=0.923;AN=52;BaseQRankSum=-2.657;DP=475;FS=3.101;HRun=0;HaplotypeScore=85.2765;InbreedingCoeff=0.8509;MQ=71.40;MQ0=10;MQRankSum=-2.245;QD=15.38;ReadPosRankSum=3.368;VQSLOD=4.8590;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:28:14.35:155,14,0	1/1:5,0:5:6.52:90,7,0	0/0:28,0:20:38.14:0,38,387	0/0:26,0:21:41.08:0,41,417	1/1:20,0:20:26.70:315,27,0	1/1:16,0:16:21.44:175,21,0	1/1:23,0:22:44.45:389,44,0	1/1:35,0:35:86.50:714,86,0	1/1:8,0:7:17.94:143,18,0	1/1:18,0:18:44.64:428,45,0	./.	1/1:14,0:14:29.88:266,30,0	1/1:17,0:17:37.30:271,37,0	1/1:5,1:5:9:99,9,0	1/1:14,0:14:35.40:272,35,0	./.	1/1:18,0:17:28.79:250,29,0	1/1:19,0:17:26.81:236,27,0	1/1:13,0:13:29.92:248,30,0	1/1:9,4:12:17.98:150,18,0	1/1:13,0:12:17.85:130,18,0	1/1:20,0:20:35.69:342,36,0	1/1:19,0:18:35.39:256,35,0	1/1:15,0:15:37.69:257,38,0	1/1:1,15:16:5.91:57,6,0	1/1:17,0:15:37.07:291,37,0	1/1:22,0:22:50.87:438,51,0	1/1:5,0:5:14.97:121,15,0
chr10	63464789	.	A	ATATG	5685.41	PASS	AB=0.903;AC=45;AF=0.833;AN=54;BaseQRankSum=-4.855;DP=501;FS=2.537;HRun=0;HaplotypeScore=107.4798;InbreedingCoeff=0.2865;MQ=64.57;MQ0=15;MQRankSum=-0.770;QD=12.86;ReadPosRankSum=2.389;VQSLOD=4.4121;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:28:1.05:141,1,0	0/1:5,0:5:6.91:83,0,7	0/0:25,0:17:38.14:0,38,387	0/0:24,0:19:41.55:0,42,417	0/1:22,0:21:13.75:286,0,14	1/1:21,0:21:24.45:231,24,0	1/1:25,0:24:41.10:297,41,0	1/1:31,0:31:86.50:714,86,0	1/1:8,0:7:17.94:143,18,0	1/1:24,0:24:24.78:394,25,0	./.	1/1:15,1:15:29.88:266,30,0	1/1:18,0:18:0.97:201,1,0	1/1:12,0:11:1.63:80,2,0	1/1:13,0:13:35.40:272,35,0	0/1:1,15:16:0.24:0,0,0	1/1:20,0:17:0.14:232,0,0	0/1:18,0:16:28.69:177,0,29	0/1:15,0:15:5.56:195,0,6	1/1:12,0:11:17.98:150,18,0	1/1:17,0:14:17.85:130,18,0	1/1:18,0:20:9.05:314,9,0	1/1:20,0:19:30.66:242,31,0	1/1:15,0:15:24.33:218,24,0	1/1:19,0:19:5.55:136,6,0	1/1:15,0:14:12.16:258,12,0	1/1:22,0:22:50.27:405,50,0	1/1:6,0:6:14.97:121,15,0
chr10	63464841	.	G	GGAGAGAGA	5920.87	PASS	AB=0.921;AC=40;AF=0.870;AN=46;BaseQRankSum=-0.390;DP=421;FS=3.814;HRun=0;HaplotypeScore=146.6044;InbreedingCoeff=0.0877;MQ=35.96;MQ0=25;MQRankSum=-1.322;QD=15.58;ReadPosRankSum=-3.227;VQSLOD=3.5243;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:15:12.51:354,13,0	1/1:3,0:5:6:139,6,0	./.	./.	./.	1/1:22,0:24:13.67:358,14,0	1/1:24,0:25:14.27:265,14,0	0/1:13,0:12:30.88:240,0,31	0/1:15,0:14:46.71:47,0,49	1/1:27,0:26:30.10:985,30,0	./.	1/1:15,0:22:15.52:489,16,0	1/1:18,0:22:12.04:402,12,0	1/1:17,0:16:3.48:94,3,0	1/1:8,0:8:10.28:274,10,0	1/1:12,0:13:6.02:181,6,0	0/1:12,0:10:6.38:151,0,6	1/1:11,0:11:14.61:215,15,0	1/1:9,0:11:7.27:231,7,0	1/1:12,0:16:14.07:379,14,0	./.	0/1:11,0:10:0:1,0,0	0/1:11,0:13:0:0,0,0	1/1:13,1:15:3.01:68,3,0	0/1:16,0:17:0:1,0,0	1/1:11,0:12:12.03:214,12,0	1/1:18,0:22:24.14:716,24,0	1/1:7,0:7:4.37:115,4,0
chr10	63464874	.	G	GAGAGAGAA	4738.89	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=10.355;DP=540;FS=25.399;HRun=0;HaplotypeScore=166.1238;InbreedingCoeff=-0.2876;MQ=53.79;MQ0=13;MQRankSum=-7.337;QD=12.09;ReadPosRankSum=0.779;VQSLOD=2.2679;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:4,2:29:18.49:539,18,0	1/1:4,0:4:5.92:108,6,0	0/0:20,0:8:22.25:0,22,212	0/0:38,0:20:39.49:0,39,401	1/1:7,11:20:44.45:298,44,0	0/1:23,0:23:99:222,0,138	0/1:23,0:19:99:109,0,104	0/1:30,0:30:99:120,0,485	0/0:16,0:15:11.07:0,11,219	0/1:23,0:22:99:307,0,237	0/0:11,0:11:14.95:0,15,123	0/1:23,0:22:68.07:369,0,68	0/1:24,0:24:99:484,0,191	0/1:14,0:14:99:118,0,104	0/1:19,0:17:99:176,0,227	0/1:17,0:17:99:164,0,146	0/1:17,0:16:99:137,0,175	0/1:15,0:14:77.21:126,0,77	0/1:14,0:14:99:357,0,160	0/1:22,0:22:99:189,0,197	0/0:9,0:9:11.99:0,12,100	0/0:15,0:13:15.80:0,16,121	0/0:17,0:17:14.33:0,14,108	0/1:12,0:12:35.92:36,0,83	0/0:22,0:21:20.86:0,21,173	0/1:19,0:19:99:246,0,224	0/1:27,0:27:99:567,0,131	0/1:14,0:12:66.76:67,0,148
chr10	63465396	.	CT	C	7941.46	PASS	AB=0.560;AC=33;AF=0.589;AN=56;BaseQRankSum=7.316;DP=685;FS=0.333;HRun=10;HaplotypeScore=80.3872;InbreedingCoeff=0.8977;MQ=65.97;MQ0=5;MQRankSum=1.266;QD=18.30;ReadPosRankSum=3.501;VQSLOD=5.5388;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:72.15:0,72,779	0/0:10,0:10:27.54:0,28,299	0/0:34,0:19:8.77:0,9,179	0/0:22,1:14:17.37:0,17,169	0/0:25,0:26:68.99:0,69,725	1/1:5,27:32:59.96:521,60,0	1/1:2,23:25:56.98:495,57,0	0/0:22,0:22:45.11:0,45,491	0/0:19,0:19:54.13:0,54,582	1/1:6,30:36:83.89:718,84,0	1/1:5,19:24:56.96:495,57,0	1/1:1,20:21:50.98:443,51,0	1/1:3,21:24:47.98:417,48,0	1/1:4,26:30:68.96:596,69,0	1/1:5,26:31:65.82:573,66,0	0/1:3,11:14:6.19:181,0,6	0/0:30,0:30:84.20:0,84,913	0/0:22,0:22:54.15:0,54,595	1/1:8,10:16:2.81:251,3,0	1/1:3,27:30:77.92:677,78,0	1/1:3,10:13:19.24:179,19,0	1/1:3,12:15:10.19:215,10,0	1/1:4,27:31:71.69:625,72,0	1/1:7,27:34:35.81:540,36,0	1/1:4,23:27:56.98:495,57,0	0/0:23,0:23:63:0,63,672	1/1:3,26:29:40.63:522,41,0	0/0:11,0:11:27.06:0,27,290
chr10	63465510	.	A	AAAAGACAAGACAAGACAAGG	32704.58	PASS	AB=0.842;AC=47;AF=0.839;AN=56;BaseQRankSum=0.032;DP=809;FS=2.684;HRun=0;HaplotypeScore=453.2711;InbreedingCoeff=0.5799;MQ=71.22;MQ0=3;MQRankSum=-6.132;QD=46.00;ReadPosRankSum=6.334;VQSLOD=2.0651;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:3,0:35:14.98:589,15,0	1/1:1,0:12:14.83:373,15,0	0/0:26,0:20:46.60:0,47,857	0/0:49,0:38:91.37:0,91,1323	1/1:2,0:25:21.89:636,22,0	1/1:52,0:52:97.88:2637,98,0	1/1:37,0:37:7.21:1162,7,0	0/1:26,0:26:32.09:521,0,32	0/0:3,0:23:9.94:0,10,218	1/1:30,0:30:73.44:2060,73,0	1/1:27,0:27:33.55:1816,34,0	1/1:28,0:28:53.55:1945,54,0	1/1:23,0:23:24.86:994,25,0	1/1:30,0:30:42.97:1757,43,0	1/1:36,0:36:24.56:1801,25,0	1/1:33,0:33:75.74:3172,76,0	0/1:19,0:18:1.49:794,0,1	0/1:2,0:20:9.96:241,0,10	1/1:32,0:32:32.52:1242,33,0	1/1:35,0:35:57.68:1376,58,0	1/1:30,0:30:20.67:718,21,0	1/1:27,0:27:65.40:1216,65,0	1/1:24,0:24:40.60:1220,41,0	1/1:25,0:24:23:1125,23,0	1/1:24,0:23:38.65:955,39,0	1/1:0,1:36:77.41:1990,77,0	1/1:34,0:34:34.72:2092,35,0	1/1:0,0:11:3.01:270,3,0
chr10	63468152	.	AT	A	3026.89	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-0.086;DP=693;FS=0.415;HRun=4;HaplotypeScore=88.2521;InbreedingCoeff=0.9988;MQ=90.72;MQ0=0;MQRankSum=-6.592;QD=29.39;ReadPosRankSum=2.400;VQSLOD=3.6661;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,123,1702	0/0:15,0:15:42.10:0,42,552	0/0:27,0:27:69.22:0,69,936	0/0:26,0:26:75.09:0,75,942	0/0:32,0:32:96.32:0,96,1343	0/0:22,0:22:63.21:0,63,882	0/0:14,0:14:39.10:0,39,512	0/0:19,0:19:54.18:0,54,756	0/0:28,0:28:78.25:0,78,1077	0/0:32,0:32:93.30:0,93,1275	0/0:22,0:22:66.22:0,66,923	0/0:28,0:28:81.27:0,81,1133	1/1:1,18:19:48.15:576,48,0	0/0:22,0:22:60.20:0,60,840	0/0:29,0:29:87.29:0,87,1217	0/0:18,0:18:51.17:0,51,714	0/0:32,0:32:87.26:0,87,1196	0/0:18,0:18:51.17:0,51,714	0/0:15,0:15:42.14:0,42,586	0/0:36,0:36:99:0,105,1446	0/0:30,0:29:90.30:0,90,1257	1/1:1,25:26:72.22:864,72,0	1/1:0,26:26:69.17:812,69,0	1/1:1,31:32:78.24:936,78,0	0/0:32,0:32:90.29:0,90,1246	0/0:18,0:18:54.17:0,54,739	0/0:25,0:25:75.24:0,75,1029	0/0:9,0:9:21.07:0,21,294
chr10	63469714	.	AC	A	3391.71	PASS	AB=0.522;AC=7;AF=0.125;AN=56;BaseQRankSum=9.926;DP=765;FS=0.878;HRun=1;HaplotypeScore=74.9480;InbreedingCoeff=0.8382;MQ=63.61;MQ0=0;MQRankSum=0.506;QD=36.08;ReadPosRankSum=-0.721;VQSLOD=3.4778;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,156,2377	0/1:1,11:12:14.80:386,0,15	0/0:26,0:23:62.87:0,63,896	0/0:29,0:27:78.11:0,78,1165	0/0:27,0:27:81.26:0,81,1269	0/0:33,0:33:99:0,99,1573	0/0:30,0:30:90.31:0,90,1436	1/1:0,33:33:96.25:1270,96,0	0/0:27,0:27:78.25:0,78,1216	0/0:39,0:39:99:0,117,1869	0/0:16,0:16:48.15:0,48,744	0/0:31,0:31:90.31:0,90,1433	0/0:29,0:29:87.28:0,87,1363	0/0:36,0:36:99:0,108,1703	0/0:25,0:25:75.23:0,75,1151	0/0:35,0:35:99:0,105,1645	1/1:1,24:25:62.31:917,62,0	1/1:1,23:24:43.24:819,43,0	0/0:20,0:20:57.19:0,57,899	0/0:26,0:26:78.27:0,78,1245	0/0:38,0:38:99:0,108,1726	0/0:25,0:25:75.22:0,75,1147	0/0:27,0:27:81.24:0,81,1246	0/0:22,0:22:66.20:0,66,1023	0/0:18,0:18:54.18:0,54,859	0/0:36,0:36:99:0,108,1678	0/0:19,0:19:57.19:0,57,907	0/0:5,0:5:15.05:0,15,240
chr10	63470150	.	GCA	G	867.82	PASS	AB=0.556;AC=3;AF=0.054;AN=56;BaseQRankSum=7.861;DP=766;FS=0.611;HRun=0;HaplotypeScore=106.8769;InbreedingCoeff=0.5724;MQ=62.87;MQ0=5;MQRankSum=-1.364;QD=24.11;ReadPosRankSum=0.569;VQSLOD=4.2766;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:57:99:0,120,1953	0/0:8,0:8:21.07:0,21,339	0/0:33,0:19:8.21:0,8,442	0/0:35,0:27:45.01:0,45,679	0/0:46,1:47:68.37:0,68,1547	0/0:24,0:24:54.18:0,54,880	0/0:22,0:22:54.18:0,54,878	0/0:29,0:29:8.34:0,8,620	0/0:19,0:19:48.16:0,48,783	0/0:27,0:28:69.20:0,69,1058	0/0:28,1:29:23.11:0,23,867	0/0:28,1:29:29.33:0,29,990	0/0:19,1:20:14.24:0,14,741	0/0:24,1:25:20.26:0,20,838	0/0:34,0:34:72.23:0,72,1151	0/0:26,0:26:63.22:0,63,1028	0/0:35,0:37:68.01:0,68,1438	0/0:9,0:9:18.06:0,18,293	0/0:17,0:17:42.14:0,42,682	0/0:27,1:28:20.26:0,20,842	0/0:25,0:25:51.17:0,51,829	0/0:34,0:34:84.29:0,84,1369	0/0:24,0:24:48.16:0,48,771	0/0:33,0:33:84.27:0,84,1335	0/0:22,0:23:66.18:0,66,985	0/1:5,19:25:34.91:604,0,35	0/0:32,1:32:44.29:0,44,1197	1/1:0,11:11:30.09:369,30,0
chr10	63470376	.	T	TGTGCAAACATCAAGGCTGAAGA	3350.09	PASS	AB=0.789;AC=3;AF=0.054;AN=56;BaseQRankSum=0.323;DP=506;FS=0.000;HRun=0;HaplotypeScore=313.4430;InbreedingCoeff=0.5805;MQ=77.76;MQ0=0;MQRankSum=-4.811;QD=186.12;ReadPosRankSum=-0.234;VQSLOD=2.9635;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:78.27:0,78,4044	0/0:5,0:5:12.04:0,12,739	0/0:14,0:14:39.13:0,39,1548	0/0:14,0:14:39.10:0,39,1066	0/0:27,0:27:78.23:0,78,3831	0/0:11,0:11:33.11:0,33,1699	0/0:25,0:25:72.25:0,72,3480	0/0:24,0:24:69.23:0,69,3164	0/0:21,0:21:63.22:0,63,3169	0/0:21,0:21:63.16:0,63,3177	0/0:12,0:12:33.11:0,33,1724	0/0:12,0:12:36.12:0,36,2020	0/0:16,0:16:42.14:0,42,2118	0/0:15,0:15:33.11:0,33,1903	0/0:16,0:16:45.15:0,45,2325	0/0:14,0:13:39.09:0,39,2074	0/0:29,0:29:81.28:0,81,3787	0/0:16,0:16:45.15:0,45,2392	0/0:22,0:22:63.20:0,63,3135	0/0:27,0:27:78.27:0,78,4320	0/0:32,0:32:90.31:0,90,4588	0/0:14,0:14:36.12:0,36,1844	0/0:14,0:14:42.12:0,42,2239	0/0:28,0:28:69.24:0,69,3360	0/0:13,0:12:39.13:0,39,2270	0/1:11,4:15:99:2521,0,141	0/0:17,0:17:51.17:0,51,2874	1/1:1,2:3:9.03:829,9,0
chr10	63470468	.	GA	G	10331.78	PASS	AC=52;AF=1.000;AN=52;DP=402;FS=0.000;HRun=5;HaplotypeScore=330.2150;InbreedingCoeff=-0.0019;MQ=28.90;MQ0=0;QD=25.70;VQSLOD=0.7923;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,11:18:30.06:316,30,0	1/1:1,5:6:15.04:162,15,0	./.	./.	1/1:3,16:19:45.08:462,45,0	1/1:0,13:13:36.08:372,36,0	1/1:1,8:9:21.04:215,21,0	1/1:6,22:28:66.18:738,66,0	1/1:1,18:19:54.11:550,54,0	1/1:0,16:16:44.66:496,45,0	1/1:3,14:17:39.07:402,39,0	1/1:1,15:16:44.98:446,45,0	1/1:0,12:12:33.07:347,33,0	1/1:2,13:15:36.08:382,36,0	1/1:0,18:17:51.11:524,51,0	1/1:5,8:13:21.04:218,21,0	1/1:2,14:16:42.07:423,42,0	1/1:0,7:7:21.06:230,21,0	1/1:3,14:17:42.12:472,42,0	1/1:3,19:22:54.12:566,54,0	1/1:2,6:8:15.04:165,15,0	1/1:3,14:17:39.03:378,39,0	1/1:0,14:14:39.07:396,39,0	1/1:1,12:13:20.43:213,20,0	1/1:1,19:19:54.11:548,54,0	1/1:4,16:20:48.13:524,48,0	1/1:2,15:17:41.93:429,42,0	1/1:1,11:12:33.08:360,33,0
chr10	63470483	.	C	CA	15607.96	PASS	AC=54;AF=1.000;AN=54;DP=414;FS=0.000;HRun=1;HaplotypeScore=297.3321;InbreedingCoeff=-0.0079;MQ=29.24;MQ0=0;QD=37.70;VQSLOD=3.6207;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,11:12:27.05:379,27,0	1/1:0,6:6:18.06:269,18,0	1/1:0,1:1:3.01:42,3,0	./.	1/1:3,17:20:45.15:662,45,0	1/1:1,9:10:27.09:404,27,0	1/1:3,7:10:27.06:370,27,0	1/1:5,20:25:72.12:998,72,0	1/1:1,15:16:45.15:673,45,0	1/1:1,19:20:57.19:853,57,0	1/1:3,16:19:48.16:706,48,0	1/1:4,14:18:48.13:685,48,0	1/1:2,17:19:57.16:820,57,0	1/1:2,11:13:33.11:492,33,0	1/1:2,17:18:54.10:749,54,0	1/1:0,6:6:18.06:269,18,0	1/1:1,11:12:33.11:481,33,0	1/1:1,10:11:33.11:494,33,0	1/1:3,18:21:60.18:871,60,0	1/1:6,20:26:57.15:827,57,0	1/1:1,5:6:12.04:179,12,0	1/1:4,14:18:42.05:568,42,0	1/1:3,16:19:54.10:748,54,0	1/1:2,12:14:33.11:485,33,0	1/1:5,15:19:48.08:658,48,0	1/1:2,18:20:57.15:805,57,0	1/1:7,15:22:45.15:673,45,0	1/1:1,10:11:30.10:449,30,0
chr10	63470502	.	G	GT	12849.38	PASS	AC=54;AF=1.000;AN=54;BaseQRankSum=-0.986;DP=397;FS=0.000;HRun=1;HaplotypeScore=245.6235;InbreedingCoeff=-0.0140;MQ=47.73;MQ0=0;MQRankSum=-1.453;QD=32.61;ReadPosRankSum=0.746;VQSLOD=4.0955;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,10:13:2.09:211,2,0	1/1:0,7:7:21.07:271,21,0	1/1:6,0:6:5.92:39,6,0	./.	1/1:6,14:20:19.97:376,20,0	1/1:0,8:8:24.08:312,24,0	1/1:0,11:11:31.65:409,32,0	1/1:6,21:27:78.17:995,78,0	1/1:1,15:16:46.38:564,46,0	1/1:2,20:22:60.20:801,60,0	1/1:0,16:16:46.70:585,47,0	1/1:2,11:13:33.04:414,33,0	1/1:2,19:21:60.16:755,60,0	1/1:0,11:11:29.58:350,30,0	1/1:4,14:17:37.57:480,38,0	1/1:0,6:6:16.29:199,16,0	1/1:1,8:9:25.60:296,26,0	1/1:2,10:12:30.10:390,30,0	1/1:2,11:13:36.12:489,36,0	1/1:0,27:27:81.26:1046,81,0	1/1:1,3:4:8.92:99,9,0	1/1:3,14:17:45.02:547,45,0	1/1:0,18:18:51.16:601,51,0	1/1:2,10:12:27.08:330,27,0	1/1:4,12:16:39.08:486,39,0	1/1:1,12:13:36.12:479,36,0	1/1:4,27:31:81.22:1050,81,0	1/1:0,7:7:21.07:276,21,0
chr10	63470504	.	A	AT	10429.46	PASS	AB=0.800;AC=53;AF=0.981;AN=54;BaseQRankSum=0.773;DP=417;FS=2.343;HRun=7;HaplotypeScore=255.0495;InbreedingCoeff=-0.0234;MQ=50.99;MQ0=0;MQRankSum=-2.689;QD=25.19;ReadPosRankSum=1.165;VQSLOD=1.1107;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:15:9.19:252,9,0	1/1:0,7:7:21.04:211,21,0	0/1:6,0:8:10.39:49,0,10	./.	1/1:20,0:20:25.48:384,25,0	1/1:3,8:11:30.07:315,30,0	1/1:0,11:11:33.08:354,33,0	1/1:11,17:28:74.18:763,74,0	1/1:4,14:18:48.10:493,48,0	1/1:5,16:21:55.94:565,56,0	1/1:5,15:20:56.74:550,57,0	1/1:11,7:18:41.53:391,42,0	1/1:3,19:22:66.09:649,66,0	1/1:1,11:12:36.08:374,36,0	1/1:5,12:16:40.95:389,41,0	1/1:4,3:7:14.07:133,14,0	1/1:3,7:10:23.38:213,23,0	1/1:3,9:12:27.06:278,27,0	1/1:3,8:11:25.30:254,25,0	1/1:4,26:30:84.11:843,84,0	1/1:1,2:3:8.38:70,8,0	1/1:5,13:18:44.07:413,44,0	1/1:0,18:18:54.11:552,54,0	1/1:5,7:12:18.03:176,18,0	1/1:3,12:15:42.09:429,42,0	1/1:3,10:13:32.11:315,32,0	1/1:5,25:30:83.44:798,83,0	1/1:0,7:7:21.05:215,21,0
chr10	63471022	.	CCAACGG	C	10994.40	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=15.898;DP=513;FS=3.651;HRun=0;HaplotypeScore=176.0975;InbreedingCoeff=0.9601;MQ=82.05;MQ0=0;MQRankSum=-15.441;QD=52.86;ReadPosRankSum=-4.080;VQSLOD=3.6789;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:96.33:0,96,3440	0/0:9,0:9:27.09:0,27,989	0/0:22,0:22:57.34:0,57,1899	0/0:24,0:23:63.22:0,63,2213	0/0:15,0:15:45.15:0,45,1527	1/1:5,16:21:51.18:1186,51,0	1/1:4,13:17:45.14:979,45,0	0/0:17,0:17:51.18:0,51,1781	0/0:20,0:20:60.21:0,60,1999	1/1:1,16:17:45.15:1086,45,0	1/1:4,6:10:21.06:392,21,0	1/1:1,12:13:36.11:805,36,0	0/0:25,0:25:63.20:0,63,2138	1/1:2,11:13:33.11:739,33,0	1/1:2,18:20:57.15:1235,57,0	1/1:4,15:19:45.15:1001,45,0	0/0:24,0:24:69.24:0,69,2526	0/0:19,0:19:57.20:0,57,2004	1/1:7,9:16:39.11:789,39,0	1/1:1,10:12:33.08:688,33,0	1/1:6,10:16:15.48:299,15,0	0/0:18,0:18:54.19:0,54,1800	0/0:18,0:18:54.17:0,54,1726	0/0:29,0:29:87.30:0,87,3170	1/1:3,13:16:45.14:924,45,0	0/0:24,1:25:0.22:0,0,2403	1/1:6,12:18:39.12:871,39,0	0/0:5,0:5:15.05:0,15,550
chr10	63471031	.	TAAA	T	7821.38	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=16.646;DP=451;FS=1.209;HRun=3;HaplotypeScore=148.9073;InbreedingCoeff=0.9954;MQ=77.33;MQ0=0;MQRankSum=-16.751;QD=48.58;ReadPosRankSum=-3.866;VQSLOD=3.3194;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:96.33:0,96,2355	0/0:10,0:10:30.10:0,30,739	0/0:18,0:18:47.53:0,48,1026	0/0:27,0:23:66.02:0,66,1399	0/0:13,0:13:39.12:0,39,882	1/1:0,16:16:48.16:848,48,0	1/1:0,13:13:39.13:683,39,0	0/0:14,0:14:42.13:0,42,959	0/0:17,0:17:51.16:0,51,1181	1/1:0,16:16:45.15:817,45,0	1/1:0,6:6:17.80:256,18,0	1/1:0,12:12:34.93:588,35,0	0/0:22,0:22:55.07:0,55,1290	1/1:0,11:11:30.10:507,30,0	1/1:0,18:18:49.98:834,50,0	1/1:0,15:15:44.89:757,45,0	0/0:26,0:26:78.27:0,78,1866	0/0:18,0:18:54.16:0,54,1247	1/1:0,9:9:27.09:488,27,0	1/1:1,9:10:30.10:489,30,0	1/1:0,10:10:23.93:301,24,0	0/0:16,0:16:48.16:0,48,1102	0/0:12,0:12:36.12:0,36,862	0/0:32,0:32:96.33:0,96,2285	1/1:0,13:13:38.87:624,39,0	0/0:24,1:25:21.18:0,21,1623	1/1:0,12:12:36.12:629,36,0	0/0:5,0:5:15.05:0,15,370
chr10	63471049	.	A	AGTGTGT	2971.14	PASS	AB=0.964;AC=42;AF=0.778;AN=54;BaseQRankSum=0.374;DP=601;FS=0.992;HRun=0;HaplotypeScore=244.8985;InbreedingCoeff=0.4288;MQ=52.27;MQ0=8;MQRankSum=-1.505;QD=5.76;ReadPosRankSum=-1.656;VQSLOD=2.3737;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:43,0:43:16.56:164,17,0	0/0:12,0:12:5.85:0,6,63	./.	0/1:19,0:12:0:0,0,0	0/1:12,0:12:0:0,0,0	1/1:26,0:26:11.51:280,12,0	0/1:19,0:19:0.01:0,0,0	1/1:20,0:20:7.19:30,7,0	1/1:20,0:20:9.02:141,9,0	1/1:31,0:31:34.48:444,34,0	1/1:10,0:8:3.01:42,3,0	1/1:23,0:22:9.32:169,9,0	0/0:24,0:24:1.59:0,2,37	1/1:15,0:21:6.02:116,6,0	0/1:18,7:25:0:0,0,0	1/1:19,0:19:3.90:89,4,0	0/0:31,0:30:6.70:0,7,313	0/1:24,0:23:5.78:6,0,168	1/1:22,0:21:18.60:281,19,0	1/1:18,0:18:3.01:96,3,0	1/1:33,0:33:11.46:170,11,0	1/1:14,0:14:3:25,3,0	0/1:12,0:12:0:0,0,0	1/1:27,0:27:37.73:293,38,0	1/1:23,5:27:6.40:174,6,0	1/1:30,0:30:31.42:501,31,0	1/1:13,0:13:2.84:68,3,0	1/1:7,0:6:0.47:1,0,0
chr10	63471086	.	GTGTGTGTA	G	964.51	PASS	AB=1.000;AC=14;AF=0.250;AN=56;BaseQRankSum=-1.232;DP=576;FS=12.900;HRun=0;HaplotypeScore=172.7100;InbreedingCoeff=0.3398;MQ=44.82;MQ0=21;MQRankSum=0.829;QD=4.55;ReadPosRankSum=-4.320;VQSLOD=0.5903;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:9.23:0,9,967	0/0:8,0:8:15.09:0,15,354	0/1:22,0:3:6.92:7,0,12	0/1:39,0:12:13.33:13,0,118	0/0:12,0:12:8.97:0,9,70	0/0:22,0:21:11.03:0,11,560	0/0:21,0:21:19.69:0,20,170	0/0:21,0:21:0.52:0,1,211	0/0:22,0:22:36.26:0,36,575	0/1:26,0:25:11.08:11,0,617	0/0:8,0:6:8.95:0,9,141	0/0:25,0:24:11.60:0,12,455	1/1:4,18:22:6.28:95,6,0	0/0:20,0:20:2.42:0,2,206	0/0:18,0:18:8.99:0,9,97	0/0:12,0:12:11.68:0,12,174	0/0:25,0:24:55.79:0,56,1264	0/0:19,0:19:19.29:0,19,865	0/1:16,0:16:2.26:2,0,538	0/0:13,0:12:5.96:0,6,154	0/0:40,0:40:28.41:0,28,646	1/1:9,0:8:20.96:170,21,0	1/1:13,0:13:18.84:146,19,0	1/1:33,0:32:76.41:662,76,0	0/0:21,0:20:6.44:0,6,232	0/1:24,0:24:17.35:17,0,892	0/1:8,0:8:1.96:2,0,275	0/0:5,0:4:5.99:0,6,48
chr10	63471092	.	GTA	G	1236.59	PASS	AB=0.998;AC=21;AF=0.375;AN=56;BaseQRankSum=2.817;DP=588;FS=15.896;HRun=0;HaplotypeScore=126.6186;InbreedingCoeff=0.0010;MQ=47.67;MQ0=17;MQRankSum=1.261;QD=3.21;ReadPosRankSum=-2.849;VQSLOD=1.2157;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:50,0:50:49.37:49,0,524	0/1:12,0:12:19.91:20,0,207	0/1:25,0:4:9.54:11,0,10	0/1:40,0:14:33.84:34,0,110	0/0:6,5:11:11.97:0,12,95	0/0:25,0:24:19.20:0,19,335	0/0:26,0:26:31.37:0,31,270	0/0:21,3:24:4.99:0,5,287	0/1:22,0:22:13.17:13,0,288	0/1:26,0:25:75.83:76,0,317	0/0:6,0:5:8.94:0,9,72	0/1:25,0:25:18:18,0,201	1/1:19,0:19:6.67:37,7,0	0/0:18,0:18:0.63:0,1,66	0/0:17,0:17:8.96:0,9,74	0/1:11,0:11:3.98:4,0,91	0/1:28,0:27:3.53:4,0,494	0/1:22,0:22:44.27:44,0,343	0/1:17,0:17:0.23:0,0,178	0/0:17,0:16:20.98:0,21,207	0/0:37,0:37:4.67:0,5,241	1/1:9,0:8:20.96:170,21,0	1/1:13,0:13:26.94:217,27,0	1/1:33,0:32:80.82:650,81,0	0/0:20,0:19:8.27:0,8,107	0/1:25,0:25:54.50:55,0,330	0/1:7,0:7:2.09:2,0,105	0/0:2,0:2:5.99:0,6,48
chr10	63471844	.	T	TTGTGTG	1338.75	PASS	AB=1.000;AC=6;AF=0.107;AN=56;BaseQRankSum=4.552;DP=837;FS=5.775;HRun=0;HaplotypeScore=205.2250;InbreedingCoeff=0.6272;MQ=71.74;MQ0=7;MQRankSum=-6.397;QD=9.49;ReadPosRankSum=-4.870;VQSLOD=1.3129;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:10,23:37:39.08:902,39,0	0/0:9,0:10:21.07:0,21,450	0/0:61,0:43:23.35:0,23,813	0/1:58,0:43:17.60:18,0,398	1/1:5,12:19:25.32:535,25,0	0/0:21,0:21:57.05:0,57,1111	0/0:24,0:25:33.32:0,33,836	0/0:39,0:40:81.23:0,81,1391	0/0:25,0:25:50.08:0,50,1164	0/0:39,0:39:92.31:0,92,1899	0/0:27,0:28:72.18:0,72,1354	0/0:22,0:22:51.15:0,51,1016	0/0:36,0:36:99:0,99,2016	0/0:27,0:27:56.08:0,56,1228	0/0:39,0:38:93.23:0,93,1745	0/0:20,0:19:37.92:0,38,879	0/0:22,0:22:35.24:0,35,748	0/0:29,0:29:58:0,58,896	0/0:28,0:28:62.87:0,63,1040	0/0:30,0:30:69.06:0,69,1361	0/0:37,0:37:54.75:0,55,1263	0/0:26,0:26:69.23:0,69,1440	0/0:25,0:27:69.08:0,69,1305	0/0:35,0:36:94.16:0,94,1790	0/0:21,0:21:54.16:0,54,1052	0/1:6,0:25:19.93:20,0,487	0/0:31,0:31:78.25:0,78,1502	0/0:4,0:14:24.08:0,24,335
chr10	63472602	.	T	TC	869.31	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-6.137;DP=690;FS=0.000;HRun=3;HaplotypeScore=90.1552;InbreedingCoeff=0.9891;MQ=71.89;MQ0=0;MQRankSum=0.724;QD=31.05;ReadPosRankSum=0.334;VQSLOD=3.2037;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,141,1676	0/0:6,0:6:18.06:0,18,215	0/0:31,0:31:74.24:0,74,843	0/0:19,0:18:48.55:0,49,546	0/0:19,0:19:45.14:0,45,539	0/0:25,0:25:72.15:0,72,824	0/0:15,0:15:42.11:0,42,482	0/0:30,0:30:84.18:0,84,968	1/1:1,27:28:69.23:964,69,0	0/0:15,0:15:39.08:0,39,451	0/0:16,0:16:39.09:0,39,452	0/0:17,0:17:51.16:0,51,610	0/0:35,0:35:99:0,102,1184	0/0:34,0:34:96.25:0,96,1123	0/0:31,0:31:87.24:0,87,1019	0/0:27,0:27:81.22:0,81,955	0/0:37,0:37:99:0,111,1288	0/0:25,0:25:67.53:0,68,811	0/0:23,0:22:63.17:0,63,734	0/0:11,0:11:33.10:0,33,395	0/0:55,0:55:99:0,165,1939	0/0:26,0:26:69.18:0,69,802	0/0:14,0:14:30.09:0,30,359	0/0:30,0:30:81.21:0,81,955	0/0:20,0:20:57.14:0,57,660	0/0:27,0:27:72.22:0,72,863	0/0:17,0:17:48.13:0,48,563	0/0:8,0:8:24.07:0,24,287
chr10	63475147	.	C	CCATAGGGGA	36837.70	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-8.057;DP=507;FS=3.767;HRun=0;HaplotypeScore=118.8788;InbreedingCoeff=0.9855;MQ=81.38;MQ0=0;MQRankSum=-16.246;QD=108.67;ReadPosRankSum=2.572;VQSLOD=5.9333;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:74.69:0,75,2414	0/0:5,0:5:15.05:0,15,443	0/0:18,0:18:45.13:0,45,1151	0/0:21,0:21:57.17:0,57,1525	0/0:25,0:25:72.21:0,72,2073	1/1:5,16:26:60.21:2820,60,0	1/1:2,6:12:24.08:1173,24,0	0/0:39,0:39:99:0,111,3188	1/1:1,10:13:36.12:1758,36,0	1/1:7,10:24:71.97:2733,72,0	1/1:8,11:23:42.14:1978,42,0	1/1:5,9:16:36.12:1535,36,0	1/1:7,8:17:42.14:1809,42,0	1/1:3,11:16:42.14:2001,42,0	1/1:1,18:23:57.20:2762,57,0	1/1:3,12:17:45.15:2170,45,0	0/0:15,0:15:42.14:0,42,1282	0/0:16,0:16:42.07:0,42,1126	1/1:5,5:17:51.15:2036,51,0	1/1:7,14:25:60.21:2839,60,0	1/1:5,6:13:24.08:1173,24,0	1/1:1,2:5:9.03:438,9,0	1/1:4,6:12:23.82:1170,24,0	1/1:3,6:10:21.07:1025,21,0	1/1:0,9:13:24.08:1173,24,0	1/1:5,11:22:60.16:2555,60,0	1/1:5,10:19:45.15:2078,45,0	1/1:0,11:14:33.11:1614,33,0
chr10	63475375	.	TA	T	7590.20	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=6.101;DP=454;FS=0.000;HRun=2;HaplotypeScore=109.8328;InbreedingCoeff=0.9963;MQ=80.13;MQ0=0;MQRankSum=-6.260;QD=35.80;ReadPosRankSum=1.330;VQSLOD=4.6527;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:33.11:0,33,494	0/0:7,0:7:18.06:0,18,270	0/0:19,0:19:57.16:0,57,826	0/0:9,0:9:18.06:0,18,268	0/0:27,0:27:78.25:0,78,1150	1/1:0,17:17:48.16:622,48,0	1/1:2,6:8:18.06:234,18,0	0/0:33,0:33:93.30:0,93,1376	0/0:12,0:12:33.11:0,33,495	1/1:0,25:25:72.23:935,72,0	1/1:2,16:18:45.15:584,45,0	1/1:1,14:15:39.13:506,39,0	0/0:10,0:10:30.10:0,30,450	1/1:0,13:13:36.12:467,36,0	1/1:0,14:14:39.13:506,39,0	1/1:0,18:18:48.16:623,48,0	0/0:15,0:15:36.12:0,36,539	0/0:17,0:17:48.16:0,48,719	1/1:1,15:16:45.15:584,45,0	1/1:1,20:21:60.20:779,60,0	1/1:0,13:13:33.11:428,33,0	0/0:10,0:10:30.09:0,30,430	0/0:21,0:21:63.20:0,63,923	0/0:13,0:13:33.11:0,33,495	1/1:0,13:13:39.13:506,39,0	0/0:15,0:14:45.14:0,45,655	1/1:0,21:21:63.20:817,63,0	0/0:21,0:21:57.19:0,57,854
chr10	63475429	.	G	GGTT	1271.95	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=2.051;DP=430;FS=12.868;HRun=0;HaplotypeScore=100.6039;InbreedingCoeff=0.8756;MQ=61.38;MQ0=9;MQRankSum=-1.770;QD=23.55;ReadPosRankSum=1.472;VQSLOD=3.0971;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:33.09:0,33,445	0/0:5,0:5:6.02:0,6,87	0/0:37,0:17:22.13:0,22,261	0/0:12,0:6:8.89:0,9,86	0/0:21,0:21:36.08:0,36,501	0/0:15,0:14:33.03:0,33,428	0/0:8,0:8:21.07:0,21,295	0/0:34,0:34:57.16:0,57,774	0/0:7,0:7:9.03:0,9,131	0/0:20,0:20:42.13:0,42,587	0/0:17,0:17:42.06:0,42,561	0/0:6,0:6:15.01:0,15,195	1/1:6,2:8:12.04:192,12,0	0/0:3,0:3:6.02:0,6,87	0/0:10,0:10:30.10:0,30,428	0/0:8,0:8:21.07:0,21,302	0/0:9,0:9:12.03:0,12,156	0/0:26,0:26:54.01:0,54,712	0/0:15,0:15:24.07:0,24,332	0/0:21,0:21:36.06:0,36,475	0/0:9,0:9:15.05:0,15,216	1/1:9,1:10:12.04:218,12,0	1/1:16,7:24:30.10:525,30,0	1/1:12,0:12:32.78:492,33,0	0/0:15,0:15:27.07:0,27,369	0/0:24,0:23:18.06:0,18,260	0/0:10,0:10:30.06:0,30,406	0/0:20,0:20:30.07:0,30,392
chr10	63475886	.	C	CA	8498.07	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=3.031;DP=355;FS=23.536;HRun=1;HaplotypeScore=357.0173;InbreedingCoeff=0.8717;MQ=50.00;MQ0=0;MQRankSum=-4.228;QD=24.56;ReadPosRankSum=2.694;VQSLOD=0.5423;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,15:21:36.98:390,37,0	1/1:3,9:12:30.03:295,30,0	0/0:3,0:3:8.69:0,9,77	0/0:6,0:6:12.03:0,12,135	1/1:4,16:20:40.03:360,40,0	1/1:3,17:19:44.84:433,45,0	1/1:1,5:6:14.16:131,14,0	1/1:4,10:14:36.05:425,36,0	1/1:3,9:12:27.07:286,27,0	1/1:3,15:18:44.69:553,45,0	1/1:2,15:17:41.95:385,42,0	1/1:0,9:9:24.06:259,24,0	1/1:3,12:15:36.03:375,36,0	1/1:6,6:12:24.05:250,24,0	1/1:3,7:10:21.05:228,21,0	1/1:3,16:18:51.06:527,51,0	1/1:0,5:5:14.93:147,15,0	1/1:0,5:5:12.04:147,12,0	1/1:1,11:12:36.11:457,36,0	1/1:2,17:19:47.19:436,47,0	1/1:6,9:15:20.41:189,20,0	1/1:2,10:12:32.94:299,33,0	1/1:2,16:18:45.65:401,46,0	1/1:2,6:8:15.03:152,15,0	1/1:2,14:16:39.06:391,39,0	1/1:4,16:21:60.09:693,60,0	1/1:2,5:7:18.01:186,18,0	1/1:0,3:3:9.03:103,9,0
chr10	63475901	.	G	GA	4754.43	PASS	AB=1.000;AC=53;AF=0.981;AN=54;BaseQRankSum=6.633;DP=402;FS=1.862;HRun=1;HaplotypeScore=554.7535;InbreedingCoeff=0.3800;MQ=36.18;MQ0=0;MQRankSum=-0.257;QD=11.83;ReadPosRankSum=7.725;VQSLOD=1.9475;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,12:14:26.17:172,26,0	1/1:2,8:10:16.34:92,16,0	./.	0/1:3,0:3:0.78:1,0,15	1/1:5,24:29:26.96:140,27,0	1/1:2,17:19:33.52:240,34,0	1/1:3,7:10:8.61:100,9,0	1/1:6,13:19:29.96:209,30,0	1/1:3,12:15:28.86:274,29,0	1/1:3,16:19:45.43:337,45,0	1/1:3,15:19:7.52:73,8,0	1/1:2,12:14:33.94:298,34,0	1/1:0,12:12:34.73:188,35,0	1/1:1,15:16:39.27:383,39,0	1/1:2,10:12:29.01:254,29,0	1/1:2,15:17:38.83:259,39,0	1/1:2,6:8:13.42:83,13,0	1/1:2,4:6:8.76:71,9,0	1/1:1,11:12:26.29:193,26,0	1/1:5,21:26:16.53:181,17,0	1/1:2,10:12:11.53:61,12,0	1/1:2,16:18:13.26:86,13,0	1/1:2,23:25:32.11:160,32,0	1/1:0,8:8:11.49:65,11,0	1/1:4,15:19:35.15:251,35,0	1/1:6,19:25:35.62:370,36,0	1/1:1,9:10:14.25:147,14,0	1/1:1,4:5:10.98:64,11,0
chr10	63475907	.	A	AG	12974.33	PASS	AC=52;AF=1.000;AN=52;BaseQRankSum=-3.319;DP=402;FS=21.813;HRun=1;HaplotypeScore=553.7194;InbreedingCoeff=-0.0052;MQ=31.48;MQ0=0;MQRankSum=-0.981;QD=32.35;ReadPosRankSum=6.522;VQSLOD=-0.4522;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,12:14:31.87:478,32,0	1/1:0,8:8:21:281,21,0	./.	./.	1/1:2,27:29:38.03:639,38,0	1/1:2,17:19:43.52:661,44,0	1/1:0,9:9:21.85:258,22,0	1/1:5,17:22:56.14:667,56,0	1/1:1,14:15:37.37:563,37,0	1/1:1,16:18:52.73:712,53,0	1/1:2,17:19:22.82:388,23,0	1/1:2,13:15:25.20:561,25,0	1/1:2,12:14:25.85:556,26,0	1/1:0,16:16:42.58:685,43,0	1/1:1,11:12:26.28:473,26,0	1/1:0,16:16:48.02:659,48,0	1/1:0,7:7:16.06:217,16,0	1/1:0,4:4:12.04:175,12,0	1/1:2,12:14:34.28:412,34,0	1/1:2,24:27:48.89:767,49,0	1/1:0,10:10:12.02:93,12,0	1/1:1,18:19:36.95:531,37,0	1/1:3,24:27:57.42:903,57,0	1/1:0,8:8:14.43:280,14,0	1/1:2,18:20:39.22:603,39,0	1/1:2,23:25:54.68:906,55,0	1/1:1,9:10:22.89:326,23,0	1/1:0,4:4:12.04:180,12,0
chr10	63475913	.	G	GT	12583.73	PASS	AC=52;AF=1.000;AN=52;BaseQRankSum=-1.772;DP=377;FS=13.215;HRun=0;HaplotypeScore=557.6534;InbreedingCoeff=-0.0070;MQ=28.85;MQ0=0;MQRankSum=2.603;QD=33.38;ReadPosRankSum=6.061;VQSLOD=-0.6024;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,14:14:32.23:480,32,0	1/1:0,7:7:18.06:261,18,0	./.	./.	1/1:0,29:29:41.11:647,41,0	1/1:0,20:20:46.44:677,46,0	1/1:0,10:10:21.84:264,22,0	1/1:0,15:15:41.90:522,42,0	1/1:0,15:15:37.37:568,37,0	1/1:1,15:16:46.88:652,47,0	1/1:0,19:19:24.48:392,24,0	1/1:0,15:15:41.15:594,41,0	1/1:0,15:15:44.18:634,44,0	1/1:0,17:17:39.78:688,40,0	1/1:0,12:12:13.21:449,13,0	1/1:0,14:14:39.12:576,39,0	1/1:0,7:7:16.06:217,16,0	1/1:0,3:3:9.03:127,9,0	1/1:0,9:9:20.31:279,20,0	1/1:0,26:26:47.84:764,48,0	1/1:0,7:7:13.87:101,14,0	1/1:1,18:19:34.53:574,35,0	1/1:0,27:27:53.10:878,53,0	1/1:0,7:7:14.43:276,14,0	1/1:0,19:19:38.26:633,38,0	1/1:0,22:22:52.02:833,52,0	1/1:0,9:9:18.93:319,19,0	1/1:0,4:4:12.04:179,12,0
chr10	63475916	.	G	GA	12465.27	PASS	AC=52;AF=1.000;AN=52;BaseQRankSum=-2.604;DP=424;FS=11.615;HRun=0;HaplotypeScore=655.1029;InbreedingCoeff=-0.0117;MQ=28.87;MQ0=0;MQRankSum=2.188;QD=29.40;ReadPosRankSum=6.609;VQSLOD=-0.2407;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,14:14:32.01:389,32,0	1/1:3,7:10:8.03:250,8,0	./.	./.	1/1:4,28:33:43.70:653,44,0	1/1:2,20:22:49.74:688,50,0	1/1:3,10:13:16.82:255,17,0	1/1:1,15:16:44.90:568,45,0	1/1:3,15:18:31.94:529,32,0	1/1:1,16:17:49.63:670,50,0	1/1:5,19:24:29.60:409,30,0	1/1:3,15:18:43.59:570,44,0	1/1:1,14:16:45.36:607,45,0	1/1:1,17:18:41.97:663,42,0	1/1:2,12:14:19.90:466,20,0	1/1:3,14:17:40.27:586,40,0	1/1:0,7:7:15.96:216,16,0	1/1:0,3:3:9.03:127,9,0	1/1:1,9:10:23.32:321,23,0	1/1:4,26:30:43.72:764,44,0	1/1:0,7:7:13.78:71,14,0	1/1:1,18:20:43.22:559,43,0	1/1:0,26:27:53.10:877,53,0	1/1:0,7:7:14.43:276,14,0	1/1:3,19:22:44.27:632,44,0	1/1:4,22:26:58.45:855,58,0	1/1:2,9:11:7.21:304,7,0	1/1:0,4:4:12.04:161,12,0
chr10	63475927	.	T	TTCA	11959.02	PASS	AC=52;AF=1.000;AN=52;BaseQRankSum=-5.860;DP=365;FS=18.380;HRun=0;HaplotypeScore=610.4094;InbreedingCoeff=-0.0132;MQ=28.84;MQ0=0;MQRankSum=0.595;QD=32.76;ReadPosRankSum=5.423;VQSLOD=2.1523;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,8:8:14.89:188,15,0	1/1:1,8:9:17.50:280,18,0	./.	./.	1/1:0,32:32:53.95:778,54,0	1/1:0,20:20:37.46:682,37,0	1/1:1,11:12:24.90:393,25,0	1/1:0,13:13:39.12:627,39,0	1/1:0,15:15:34.83:423,35,0	1/1:0,11:11:31.31:493,31,0	1/1:0,21:21:14.72:440,15,0	1/1:1,13:14:36.06:472,36,0	1/1:0,12:12:32.77:477,33,0	1/1:0,15:16:43.50:643,43,0	1/1:0,16:16:31.75:493,32,0	1/1:0,19:18:41.47:637,41,0	1/1:0,5:6:12.70:186,13,0	1/1:0,2:2:6.02:93,6,0	1/1:0,7:7:18.06:302,18,0	1/1:0,25:25:56.18:797,56,0	1/1:0,5:5:10.61:91,11,0	1/1:1,17:18:43.13:594,43,0	1/1:0,24:24:67.68:983,68,0	1/1:0,6:6:14.84:205,15,0	1/1:0,18:18:32.66:477,33,0	1/1:0,22:22:39.73:708,40,0	1/1:0,12:11:20.67:395,21,0	1/1:0,2:2:6.02:102,6,0
chr10	63475934	.	GT	G	2491.73	PASS	AB=0.994;AC=44;AF=0.846;AN=52;BaseQRankSum=-2.625;DP=447;FS=1.144;HRun=1;HaplotypeScore=790.9545;InbreedingCoeff=-0.0774;MQ=28.81;MQ0=0;MQRankSum=0.684;QD=5.64;ReadPosRankSum=4.885;VQSLOD=0.7004;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,0:8:8.84:43,9,0	1/1:11,0:11:9.03:50,9,0	./.	./.	1/1:36,1:37:22.09:197,22,0	1/1:22,0:22:18.35:129,18,0	1/1:14,0:14:27.02:115,27,0	1/1:20,0:20:27.01:155,27,0	1/1:19,0:19:4.98:101,5,0	0/1:14,0:13:1.82:58,0,2	1/1:22,0:22:25.71:145,26,0	1/1:21,0:21:46.45:196,46,0	1/1:18,0:18:1.91:82,2,0	0/1:20,0:20:4.19:105,0,4	1/1:18,0:18:1.41:88,1,0	0/1:24,0:23:10.01:98,0,10	1/1:6,0:6:7.65:33,8,0	1/1:3,0:3:4.83:18,5,0	0/1:15,0:15:14.22:71,0,14	1/1:30,2:32:19.16:190,19,0	0/0:5,0:5:0.27:0,0,2	1/1:21,0:21:24.63:133,25,0	1/1:26,0:26:2.08:172,2,0	0/1:6,0:6:3.46:47,0,3	1/1:19,0:19:21.26:131,21,0	0/1:27,1:28:35.84:98,0,36	1/1:15,0:14:21.62:120,22,0	1/1:3,0:3:6.01:26,6,0
chr10	63475935	.	TC	T	7567.59	PASS	AC=52;AF=1.000;AN=52;BaseQRankSum=-3.663;DP=447;FS=6.474;HRun=6;HaplotypeScore=773.2066;InbreedingCoeff=0.0074;MQ=28.81;MQ0=0;MQRankSum=-1.122;QD=16.93;ReadPosRankSum=2.977;VQSLOD=-0.0810;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,7:8:10.02:98,10,0	1/1:1,10:11:18.46:134,18,0	./.	./.	1/1:3,34:37:38.49:520,38,0	1/1:0,22:22:36.53:399,37,0	1/1:1,13:14:35.27:296,35,0	1/1:3,17:20:45.29:487,45,0	1/1:1,18:19:30.54:290,31,0	1/1:1,13:14:12.82:234,13,0	1/1:1,21:22:37.07:376,37,0	1/1:0,21:21:50.83:422,51,0	1/1:1,17:18:32.72:296,33,0	1/1:2,18:20:35.76:385,36,0	1/1:1,17:18:20.69:277,21,0	1/1:2,22:23:42.66:374,43,0	1/1:1,5:6:11.38:87,11,0	1/1:0,3:3:6.80:50,7,0	1/1:3,12:15:24.52:248,25,0	1/1:4,28:32:53.21:472,53,0	1/1:2,3:5:3.74:17,4,0	1/1:2,19:21:43.15:363,43,0	1/1:4,22:26:59.24:581,59,0	1/1:2,4:6:12.03:125,12,0	1/1:1,18:19:27.04:311,27,0	1/1:3,25:28:9.50:331,9,0	1/1:0,15:15:27.51:310,28,0	1/1:0,3:3:8.98:82,9,0
chr10	63475959	.	GC	G	7103.05	PASS	AB=0.511;AC=51;AF=0.981;AN=52;BaseQRankSum=-3.884;DP=424;FS=4.731;HRun=4;HaplotypeScore=764.9632;InbreedingCoeff=-0.0303;MQ=28.86;MQ0=0;MQRankSum=0.736;QD=16.75;ReadPosRankSum=-4.713;VQSLOD=0.2094;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,7:7:5.28:104,5,0	1/1:0,13:13:24.47:197,24,0	./.	./.	1/1:1,31:32:42.17:465,42,0	1/1:2,17:19:16.59:299,17,0	1/1:1,13:14:28:269,28,0	1/1:1,19:20:49.88:552,50,0	1/1:1,18:19:32.37:291,32,0	1/1:2,11:13:5.46:173,5,0	1/1:3,21:24:17.19:217,17,0	1/1:0,21:21:50.90:443,51,0	1/1:2,13:15:23.32:202,23,0	1/1:0,23:23:47.96:551,48,0	1/1:1,19:20:26.47:335,26,0	1/1:1,20:20:40.25:330,40,0	1/1:0,7:7:11.27:100,11,0	1/1:0,5:5:10.19:86,10,0	1/1:1,11:12:23.45:242,23,0	1/1:1,26:27:37.43:351,37,0	1/1:1,2:3:5.41:23,5,0	1/1:1,20:21:47.90:426,48,0	1/1:1,21:22:38.14:383,38,0	1/1:0,3:3:9.03:104,9,0	1/1:3,17:20:24.53:273,25,0	0/1:1,23:24:0.76:281,0,1	1/1:1,15:16:27.91:347,28,0	1/1:1,2:3:6:57,6,0
chr10	63475965	.	GC	G	6083.27	PASS	AB=0.511;AC=51;AF=0.981;AN=52;BaseQRankSum=-3.524;DP=400;FS=3.696;HRun=3;HaplotypeScore=727.3618;InbreedingCoeff=-0.0388;MQ=28.85;MQ0=0;MQRankSum=-0.423;QD=15.21;ReadPosRankSum=-4.891;VQSLOD=0.4747;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,7:7:6.37:78,6,0	1/1:2,11:13:20.38:145,20,0	./.	./.	1/1:2,29:31:43.56:361,44,0	1/1:2,15:17:15.41:238,15,0	1/1:0,13:13:27.98:244,28,0	1/1:2,17:19:43.86:497,44,0	1/1:0,18:18:33.44:305,33,0	1/1:1,10:11:2.82:152,3,0	1/1:3,19:22:17.10:172,17,0	1/1:0,21:21:48.42:373,48,0	1/1:0,13:13:24.68:214,25,0	1/1:0,23:23:47.97:523,48,0	1/1:0,19:19:26.65:316,27,0	1/1:1,19:19:36.92:326,37,0	1/1:1,6:7:10.05:95,10,0	1/1:0,5:5:10.46:91,10,0	1/1:4,7:11:12.69:119,13,0	1/1:3,23:26:37.66:278,38,0	1/1:0,2:2:4.96:23,5,0	1/1:0,21:21:48.20:304,48,0	1/1:6,15:21:31.48:238,31,0	1/1:0,3:3:9.03:108,9,0	1/1:0,17:17:24.80:268,25,0	0/1:1,22:23:4.65:261,0,5	1/1:1,14:15:24.85:295,25,0	1/1:0,2:2:6.01:60,6,0
chr10	63475972	.	GC	G	1796.05	PASS	AB=0.655;AC=49;AF=0.942;AN=52;BaseQRankSum=-0.616;DP=424;FS=1.376;HRun=3;HaplotypeScore=793.2260;InbreedingCoeff=-0.0497;MQ=28.84;MQ0=0;MQRankSum=-2.328;QD=4.24;ReadPosRankSum=-3.049;VQSLOD=-0.0327;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,10:11:11.13:66,11,0	1/1:1,9:10:7.24:54,7,0	./.	./.	1/1:11,21:32:2:100,2,0	1/1:4,13:17:3.71:69,4,0	1/1:6,8:14:9.70:49,10,0	0/1:12,7:19:4.11:11,0,4	1/1:5,17:22:18.65:138,19,0	1/1:3,14:17:5.20:102,5,0	1/1:6,17:23:3.02:85,3,0	1/1:7,17:24:28.47:137,28,0	1/1:2,14:16:17.54:111,18,0	1/1:9,16:25:17.35:148,17,0	1/1:6,15:21:9.28:81,9,0	1/1:3,15:17:7.36:59,7,0	1/1:1,5:6:7.83:50,8,0	1/1:2,4:5:2.58:23,3,0	1/1:3,6:9:11.53:69,12,0	1/1:6,18:24:5.28:64,5,0	1/1:0,2:2:2.51:7,3,0	1/1:9,16:25:19.15:94,19,0	1/1:9,12:21:10.03:76,10,0	1/1:2,1:3:2.90:16,3,0	1/1:2,15:17:10.97:104,11,0	0/1:6,19:25:13.76:74,0,14	1/1:5,10:15:8.63:89,9,0	0/1:1,1:2:0.63:11,0,1
chr10	63475976	.	GA	G	2425.81	PASS	AB=0.500;AC=50;AF=0.962;AN=52;BaseQRankSum=-1.781;DP=303;FS=4.415;HRun=1;HaplotypeScore=618.9442;InbreedingCoeff=-0.0311;MQ=28.87;MQ0=0;MQRankSum=-0.931;QD=8.01;ReadPosRankSum=-2.801;VQSLOD=0.4736;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,10:10:12.27:86,12,0	1/1:0,9:9:10.11:68,10,0	./.	./.	1/1:0,21:21:6.34:131,6,0	1/1:0,13:13:6.35:93,6,0	1/1:0,8:8:10.53:58,11,0	0/1:0,7:7:3.63:11,0,4	1/1:0,17:17:22.31:180,22,0	1/1:0,14:14:6.67:131,7,0	1/1:0,17:17:5.33:113,5,0	1/1:0,17:17:34.10:181,34,0	1/1:1,14:15:20.36:153,20,0	1/1:0,16:16:24.39:205,24,0	1/1:0,15:15:10.80:111,11,0	1/1:0,15:14:11.71:91,12,0	1/1:0,5:5:8.46:66,8,0	1/1:0,4:3:6.33:38,6,0	1/1:0,6:6:11.08:71,11,0	1/1:0,18:18:9.03:86,9,0	1/1:0,2:2:3.28:9,3,0	1/1:0,16:16:22:119,22,0	1/1:0,12:12:16.50:123,16,0	1/1:0,1:1:2.98:21,3,0	1/1:0,15:15:13.76:132,14,0	0/1:0,19:19:14.60:104,0,15	1/1:0,10:10:10.39:115,10,0	1/1:0,1:1:2.97:20,3,0
chr10	63475983	.	AC	A	4812.36	PASS	AB=0.500;AC=50;AF=0.962;AN=52;BaseQRankSum=-1.840;DP=304;FS=0.000;HRun=2;HaplotypeScore=611.7164;InbreedingCoeff=-0.0494;MQ=28.87;MQ0=0;MQRankSum=-1.576;QD=15.83;ReadPosRankSum=-0.697;VQSLOD=0.8966;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,10:10:19.12:212,19,0	1/1:0,9:9:17.07:133,17,0	./.	./.	1/1:0,21:21:32.76:275,33,0	1/1:0,13:13:12.09:185,12,0	1/1:0,8:8:12.49:92,12,0	0/1:0,7:7:1.51:18,0,2	1/1:0,17:17:34.88:326,35,0	1/1:0,14:14:11.29:246,11,0	1/1:0,17:17:15.44:218,15,0	1/1:0,17:17:38.82:329,39,0	1/1:0,15:15:30.20:296,30,0	1/1:0,16:16:29.93:376,30,0	1/1:0,15:15:14.69:217,15,0	1/1:0,15:14:26.99:219,27,0	1/1:0,5:5:8.54:115,9,0	1/1:0,4:3:8.05:74,8,0	1/1:0,6:6:11.39:104,11,0	1/1:0,18:18:19.62:163,20,0	1/1:0,2:2:4.78:18,5,0	1/1:1,16:17:29.10:219,29,0	1/1:0,12:12:30:281,30,0	1/1:0,1:1:3.01:37,3,0	1/1:0,15:15:19.02:222,19,0	0/1:0,19:19:11.50:205,0,11	1/1:0,10:10:13.12:196,13,0	1/1:0,1:1:3.01:36,3,0
chr10	63475987	.	GC	G	2999.28	PASS	AB=0.500;AC=50;AF=0.962;AN=52;BaseQRankSum=-2.115;DP=304;FS=3.457;HRun=2;HaplotypeScore=618.0711;InbreedingCoeff=-0.0222;MQ=28.87;MQ0=0;MQRankSum=1.245;QD=9.87;ReadPosRankSum=1.045;VQSLOD=0.2239;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,10:10:18.41:147,18,0	1/1:0,9:9:11.91:79,12,0	./.	./.	1/1:0,21:21:14.22:170,14,0	1/1:0,13:13:7.82:103,8,0	1/1:0,8:8:10.38:59,10,0	0/1:0,7:7:3.22:12,0,3	1/1:1,16:17:24.96:207,25,0	1/1:0,14:14:7.78:165,8,0	1/1:0,17:17:6.21:134,6,0	1/1:0,17:17:34.04:213,34,0	1/1:1,14:15:20.98:176,21,0	1/1:0,16:16:26.19:245,26,0	1/1:0,15:15:11.83:136,12,0	1/1:0,15:14:16.04:130,16,0	1/1:0,5:5:8.52:80,9,0	1/1:0,4:3:6.44:48,6,0	1/1:0,6:6:11.33:78,11,0	1/1:0,17:18:8.59:90,9,0	1/1:0,2:2:3.28:9,3,0	1/1:0,17:17:23.14:129,23,0	1/1:0,12:12:22.93:214,23,0	1/1:0,1:1:3:26,3,0	1/1:0,15:15:13.62:144,14,0	0/1:0,19:19:14.56:138,0,15	1/1:0,10:10:11.58:131,12,0	1/1:0,1:1:3:26,3,0
chr10	63475992	.	AC	A	4427.58	PASS	AB=0.500;AC=50;AF=0.962;AN=52;BaseQRankSum=-3.400;DP=386;FS=3.296;HRun=2;HaplotypeScore=738.8119;InbreedingCoeff=-0.0089;MQ=28.90;MQ0=0;MQRankSum=0.366;QD=11.47;ReadPosRankSum=0.211;VQSLOD=1.0285;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,12:12:20.70:162,21,0	1/1:0,11:11:17.18:116,17,0	./.	./.	1/1:0,28:28:29.19:243,29,0	1/1:0,14:14:10.78:121,11,0	1/1:0,10:10:15.93:96,16,0	1/1:0,9:9:2.77:61,3,0	1/1:2,19:21:36.94:284,37,0	1/1:0,21:21:28.43:360,28,0	1/1:0,23:23:20.19:225,20,0	1/1:0,20:20:42.43:268,42,0	1/1:0,15:16:23.48:188,23,0	1/1:1,16:17:30.67:273,31,0	1/1:0,16:16:14.49:155,14,0	1/1:1,17:17:22.44:169,22,0	1/1:0,7:7:14.42:118,14,0	1/1:0,5:4:9.41:68,9,0	0/1:0,12:12:7.74:103,0,8	1/1:2,23:25:26:200,26,0	1/1:0,2:2:2.92:8,3,0	1/1:0,19:19:31.57:180,32,0	1/1:1,18:19:34.15:284,34,0	1/1:0,2:2:3:26,3,0	1/1:1,18:19:25.39:218,25,0	0/1:0,21:21:8.59:187,0,9	1/1:1,15:16:29.37:249,29,0	1/1:0,3:3:8.95:67,9,0
chr10	63475996	.	GC	G	7402.01	PASS	AB=0.500;AC=50;AF=0.962;AN=52;BaseQRankSum=-3.312;DP=386;FS=3.441;HRun=2;HaplotypeScore=727.5705;InbreedingCoeff=0.0308;MQ=28.90;MQ0=0;MQRankSum=2.242;QD=19.18;ReadPosRankSum=1.868;VQSLOD=0.4443;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,12:12:19.62:256,20,0	1/1:0,11:11:23.25:212,23,0	./.	./.	1/1:0,28:28:44.33:475,44,0	1/1:0,14:14:14.99:221,15,0	1/1:0,10:10:18.41:168,18,0	1/1:0,9:9:4.51:88,5,0	1/1:0,21:21:46.10:466,46,0	1/1:0,21:21:32.48:490,32,0	1/1:0,23:23:24.09:399,24,0	1/1:0,20:20:44.93:432,45,0	1/1:0,16:16:33.94:334,34,0	1/1:0,17:17:33.17:425,33,0	1/1:0,16:16:18.02:258,18,0	1/1:1,17:17:35.50:324,35,0	1/1:0,7:7:14.56:192,15,0	1/1:0,5:4:11.06:113,11,0	0/1:0,12:12:5.40:163,0,5	1/1:0,25:25:29.52:357,30,0	1/1:0,2:2:2.04:6,2,0	1/1:0,19:19:36.74:326,37,0	1/1:0,19:19:35.98:466,36,0	1/1:0,2:2:3.01:37,3,0	1/1:0,19:19:31.05:374,31,0	0/1:0,21:21:5.38:276,0,5	1/1:0,16:16:31.18:429,31,0	1/1:0,3:3:9.03:114,9,0
chr10	63476002	.	GC	G	7776.15	PASS	AB=0.554;AC=50;AF=0.962;AN=52;BaseQRankSum=-3.067;DP=410;FS=0.728;HRun=3;HaplotypeScore=723.5339;InbreedingCoeff=-0.0540;MQ=31.45;MQ0=0;MQRankSum=-1.788;QD=19.01;ReadPosRankSum=2.913;VQSLOD=0.4134;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,10:11:19.10:230,19,0	1/1:0,12:12:24.84:222,25,0	./.	./.	1/1:4,27:31:45.98:466,46,0	1/1:2,14:15:11.11:201,11,0	1/1:1,8:9:12.60:123,13,0	1/1:2,8:10:7.93:148,8,0	1/1:3,21:24:50.58:517,51,0	1/1:1,23:24:41.60:566,42,0	1/1:1,22:23:33.36:435,33,0	1/1:2,20:22:50.67:466,51,0	1/1:0,16:16:30.64:302,31,0	1/1:1,16:17:30:378,30,0	1/1:0,18:18:23.15:303,23,0	1/1:0,19:18:37:337,37,0	1/1:1,7:8:17.57:212,18,0	1/1:0,5:4:10.58:105,11,0	0/1:3,9:12:13.68:108,0,14	1/1:3,22:25:36.82:390,37,0	1/1:0,2:2:5.05:42,5,0	1/1:1,19:20:39.77:356,40,0	1/1:1,19:20:50.93:568,51,0	1/1:0,3:3:6.02:69,6,0	1/1:2,17:19:30.10:367,30,0	0/1:3,19:22:5.26:293,0,5	1/1:1,17:18:37.02:462,37,0	1/1:0,3:3:9.03:107,9,0
chr10	63476055	.	C	CT	12245.22	PASS	AC=52;AF=0.963;AN=54;BaseQRankSum=-0.770;DP=415;FS=2.682;HRun=4;HaplotypeScore=410.1124;InbreedingCoeff=0.6480;MQ=47.35;MQ0=0;MQRankSum=-2.638;QD=30.31;ReadPosRankSum=2.060;VQSLOD=1.4666;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,8:13:17.93:183,18,0	1/1:2,8:10:24.08:327,24,0	0/0:6,1:6:5.69:0,6,45	./.	1/1:7,20:28:53.65:637,54,0	1/1:0,12:11:30.10:409,30,0	1/1:2,12:14:36.12:490,36,0	1/1:3,12:15:36.12:492,36,0	1/1:0,19:19:54.18:735,54,0	1/1:4,30:34:95.55:1267,96,0	1/1:3,17:20:47.84:527,48,0	1/1:2,16:18:47.78:653,48,0	1/1:2,8:10:23.92:319,24,0	1/1:5,7:12:20.47:285,20,0	1/1:2,6:8:17.69:223,18,0	1/1:0,10:9:30.10:409,30,0	1/1:7,6:13:18.06:245,18,0	1/1:2,8:9:24.04:307,24,0	1/1:3,10:11:27.05:348,27,0	1/1:4,21:25:60.03:730,60,0	1/1:4,1:5:5.98:61,6,0	1/1:5,21:26:60.01:752,60,0	1/1:3,24:27:59.95:753,60,0	1/1:1,2:3:6.02:82,6,0	1/1:3,18:21:47.71:653,48,0	1/1:3,15:18:48.12:628,48,0	1/1:2,15:17:44.95:610,45,0	1/1:0,3:3:9.03:122,9,0
chr10	63477424	.	GT	G	2910.03	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=10.618;DP=814;FS=3.361;HRun=1;HaplotypeScore=74.1656;InbreedingCoeff=0.9971;MQ=80.27;MQ0=0;MQRankSum=0.900;QD=35.49;ReadPosRankSum=-1.558;VQSLOD=3.2842;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:49:99:0,144,2212	0/0:15,0:15:45.15:0,45,719	0/0:29,0:29:87.30:0,87,1385	0/0:24,0:24:66.22:0,66,1043	0/0:20,0:20:60.20:0,60,959	0/0:33,0:33:99:0,99,1582	0/0:30,0:30:90.28:0,90,1390	0/0:37,0:37:99:0,108,1699	1/1:0,29:29:69.23:963,69,0	0/0:34,0:34:99:0,102,1586	0/0:22,0:22:66.23:0,66,1054	0/0:39,0:39:99:0,117,1845	0/0:43,0:43:99:0,129,1989	0/0:23,0:23:69.22:0,69,1079	0/0:39,0:39:99:0,117,1870	0/0:28,0:28:84.27:0,84,1320	0/0:28,0:28:84.26:0,84,1316	0/0:24,0:24:72.25:0,72,1150	0/0:22,0:22:66.21:0,66,1029	0/0:32,0:32:93.32:0,93,1482	0/0:38,0:38:99:0,114,1796	0/0:34,0:34:99:0,99,1544	0/0:29,0:29:87.30:0,87,1385	0/0:21,0:21:63.21:0,63,1007	0/0:15,0:15:45.15:0,45,718	1/1:1,46:47:93.57:1837,94,0	0/0:23,0:23:69.24:0,69,1103	1/1:0,6:6:18.06:252,18,0
chr10	63480768	.	C	CAGAG	31671.82	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-9.749;DP=630;FS=0.961;HRun=0;HaplotypeScore=89.7835;InbreedingCoeff=0.9952;MQ=66.72;MQ0=0;MQRankSum=-6.736;QD=59.09;ReadPosRankSum=3.011;VQSLOD=6.3839;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:81.26:0,81,1441	1/1:1,7:8:18.06:472,18,0	0/0:23,0:23:63.12:0,63,979	0/0:10,0:10:18.16:0,18,319	0/0:28,0:28:78.25:0,78,1381	1/1:2,19:23:48.16:1257,48,0	1/1:2,19:23:57.20:1476,57,0	1/1:15,11:28:63.22:1539,63,0	1/1:5,17:22:57.20:1490,57,0	1/1:5,23:30:78.13:1971,78,0	1/1:8,18:26:57.20:1481,57,0	1/1:3,15:19:39.13:1020,39,0	1/1:4,19:23:60.21:1552,60,0	1/1:1,17:19:48.16:1256,48,0	1/1:8,17:26:57.20:1490,57,0	1/1:1,21:23:63.22:1649,63,0	1/1:6,11:20:33.11:864,33,0	1/1:3,9:12:30.10:745,30,0	1/1:11,9:21:42.14:1069,42,0	1/1:4,25:29:72.25:1854,72,0	1/1:7,22:29:60.21:1571,60,0	1/1:1,14:16:33.11:863,33,0	1/1:7,20:28:51.18:1333,51,0	1/1:3,19:23:54.19:1414,54,0	1/1:4,21:25:48.16:1256,48,0	1/1:5,23:29:75.23:1852,75,0	1/1:2,17:19:51.18:1335,51,0	1/1:1,13:15:33.11:864,33,0
chr10	63481371	.	G	GTA	1927.23	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-7.767;DP=776;FS=2.828;HRun=0;HaplotypeScore=96.5618;InbreedingCoeff=0.9999;MQ=91.78;MQ0=0;MQRankSum=0.073;QD=38.54;ReadPosRankSum=-0.176;VQSLOD=5.5728;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,108,1401	0/0:14,0:14:42.14:0,42,552	0/0:43,0:43:69.06:0,69,1023	0/0:24,0:24:45.12:0,45,549	0/0:25,0:25:60.19:0,60,788	0/0:21,0:21:48.14:0,48,616	0/0:23,0:23:60.20:0,60,788	0/0:30,0:30:75.23:0,75,973	0/0:22,0:22:57.17:0,57,734	0/0:29,0:28:72.22:0,72,932	0/0:26,0:26:72.21:0,72,916	0/0:28,0:28:81.26:0,81,1059	0/0:28,0:28:75.24:0,75,985	0/0:33,0:33:96.31:0,96,1261	0/0:20,0:20:54.18:0,54,710	0/0:28,0:28:75.23:0,75,971	0/0:34,0:34:81.26:0,81,1062	0/0:19,0:19:54.17:0,54,706	0/0:30,0:29:81.25:0,81,1049	0/0:31,0:31:78.25:0,78,1025	0/0:27,0:27:78.24:0,78,1010	0/0:26,0:26:72.22:0,72,931	0/0:24,0:24:69.17:0,69,860	0/0:45,0:45:99:0,123,1616	0/0:28,0:28:75.23:0,75,971	1/1:7,29:37:50.90:1432,51,0	0/0:23,0:23:63.19:0,63,812	1/1:0,13:13:36.12:617,36,0
chr10	63481444	.	TTGTG	T	1280.39	PASS	AB=0.822;AC=11;AF=0.212;AN=52;BaseQRankSum=-0.253;DP=748;FS=4.542;HRun=0;HaplotypeScore=182.0086;InbreedingCoeff=0.6565;MQ=56.85;MQ0=9;MQRankSum=0.852;QD=8.21;ReadPosRankSum=2.868;VQSLOD=2.8936;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:35:3.01:0,3,50	1/1:5,11:16:20.97:332,21,0	./.	./.	0/0:25,0:24:2.79:0,3,49	0/0:22,0:22:8.99:0,9,152	0/0:29,0:29:18.53:0,19,357	1/1:27,0:26:9.02:108,9,0	1/1:8,0:29:27.02:246,27,0	0/0:43,0:41:71.17:0,71,964	0/0:22,0:22:12.02:0,12,149	0/0:30,0:28:20.97:0,21,267	0/0:28,0:28:27.05:0,27,316	0/0:20,0:24:8.99:0,9,123	0/0:20,0:22:2.86:0,3,52	0/0:25,0:25:2.75:0,3,56	1/1:11,13:24:33.08:459,33,0	1/1:11,9:22:21.06:293,21,0	0/0:19,0:18:18.06:0,18,234	0/0:19,0:20:5.97:0,6,45	0/0:35,0:34:9.02:0,9,134	0/0:40,0:39:6.77:0,7,109	0/0:27,0:27:14.94:0,15,226	0/0:26,0:36:9.01:0,9,123	0/0:18,0:21:5.94:0,6,92	0/1:29,1:37:3.17:3,0,213	0/0:17,0:16:15.04:0,15,193	0/0:10,0:14:19.54:0,20,120
chr10	63481825	.	G	GAA	2593.84	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-3.760;DP=567;FS=0.884;HRun=10;HaplotypeScore=85.5159;InbreedingCoeff=0.9784;MQ=69.57;MQ0=0;MQRankSum=1.210;QD=19.07;ReadPosRankSum=-1.734;VQSLOD=2.4816;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:1,0:28:62.75:0,63,269	1/1:0,9:11:27.04:361,27,0	0/0:20,0:19:31.38:0,31,286	0/0:8,0:6:11.20:0,11,76	0/0:2,0:31:68.51:0,69,296	0/0:16,0:17:38.75:0,39,371	0/0:10,0:10:21.02:0,21,213	1/1:13,16:30:42.43:668,42,0	0/0:17,0:17:23.13:0,23,425	0/0:29,0:29:50.70:0,51,641	0/0:14,0:14:24.89:0,25,298	0/0:14,0:15:26.56:0,27,303	0/0:20,0:20:51.07:0,51,518	0/0:21,0:22:56.86:0,57,560	0/0:22,0:22:57.07:0,57,565	0/0:12,0:12:33.07:0,33,335	1/1:8,26:37:59.69:858,60,0	1/1:4,18:22:39.13:581,39,0	0/0:18,0:19:41.75:0,42,394	0/0:15,0:14:26.98:0,27,268	0/0:4,0:4:9.01:0,9,92	0/0:16,0:16:42.06:0,42,422	0/0:29,0:31:68.71:0,69,732	0/0:18,0:18:45.08:0,45,458	0/0:25,0:26:56.82:0,57,625	1/1:3,0:21:40.64:154,41,0	0/0:33,0:35:74.47:0,74,734	1/1:0,1:14:35.45:159,35,0
chr10	63483353	.	CA	C	14946.20	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=10.666;DP=678;FS=7.289;HRun=4;HaplotypeScore=94.4009;InbreedingCoeff=0.9991;MQ=84.66;MQ0=0;MQRankSum=-3.286;QD=31.14;ReadPosRankSum=5.707;VQSLOD=4.6443;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,108,1487	0/0:9,0:9:27.09:0,27,377	0/0:19,0:19:51.11:0,51,668	0/0:25,0:25:52.40:0,52,718	0/0:29,0:29:87.28:0,87,1191	1/1:1,23:24:66.20:791,66,0	1/1:1,28:29:63.19:755,63,0	0/0:32,0:32:93.30:0,93,1288	1/1:2,24:26:66.20:791,66,0	1/1:3,30:33:90.26:1067,90,0	1/1:0,9:9:21.06:252,21,0	1/1:1,29:30:69.21:827,69,0	1/1:1,17:18:42.13:503,42,0	1/1:0,18:18:48.15:576,48,0	1/1:1,39:40:99:1367,114,0	1/1:1,22:23:54.17:648,54,0	0/0:26,0:25:78.21:0,78,1036	0/0:22,0:22:66.18:0,66,901	1/1:0,13:13:39.08:443,39,0	1/1:0,24:24:63.19:755,63,0	1/1:1,33:34:87.27:1043,87,0	1/1:4,21:25:60.18:719,60,0	1/1:1,19:20:57.17:683,57,0	1/1:1,21:22:57.17:683,57,0	1/1:0,18:18:48.15:573,48,0	1/1:2,27:29:81.24:959,81,0	1/1:0,31:31:87.27:1042,87,0	1/1:0,14:14:39.12:468,39,0
chr10	63483633	.	A	AT	1284.69	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-3.251;DP=618;FS=3.476;HRun=9;HaplotypeScore=82.7408;InbreedingCoeff=0.9434;MQ=72.42;MQ0=0;MQRankSum=-0.640;QD=22.15;ReadPosRankSum=2.520;VQSLOD=4.5775;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,108,959	0/0:14,0:14:29.98:0,30,260	0/0:14,0:14:19.57:0,20,192	0/0:15,0:12:3.88:0,4,125	0/0:29,0:29:80.97:0,81,703	0/0:22,0:22:62.99:0,63,547	0/0:18,0:18:47.97:0,48,416	0/0:34,0:34:71.79:0,72,621	1/1:4,24:28:57.15:631,57,0	0/0:33,0:33:89.97:0,90,780	0/0:17,0:17:35.97:0,36,312	0/0:16,0:16:41.99:0,42,365	0/0:18,0:18:47.99:0,48,416	0/0:15,0:15:35.96:0,36,305	0/0:30,0:30:83.97:0,84,729	0/0:21,1:22:23.78:0,24,432	0/0:15,0:15:38.99:0,39,338	0/0:9,0:9:20.99:0,21,182	0/0:26,0:26:56.94:0,57,490	0/0:31,0:31:86.97:0,87,755	0/0:19,0:19:53.99:0,54,469	0/0:19,0:19:50.95:0,51,435	0/0:30,0:30:80.94:0,81,693	0/0:20,0:20:50.95:0,51,437	0/0:26,0:26:74.98:0,75,650	1/1:3,15:18:45.12:498,45,0	0/0:24,0:23:50.97:0,51,442	1/1:3,9:12:27.07:299,27,0
chr10	63485079	.	GA	G	862.21	PASS	AB=0.761;AC=6;AF=0.107;AN=56;BaseQRankSum=7.028;DP=560;FS=3.645;HRun=10;HaplotypeScore=57.3220;InbreedingCoeff=0.6750;MQ=70.87;MQ0=1;MQRankSum=0.260;QD=12.68;ReadPosRankSum=2.464;VQSLOD=3.4700;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:23:62.84:0,63,642	0/0:12,0:12:33.08:0,33,359	0/1:15,1:13:2.04:2,0,177	0/0:12,0:12:24.01:0,24,237	0/0:30,0:30:73.08:0,73,798	0/0:17,1:18:22.07:0,22,472	0/0:17,0:17:48.12:0,48,523	0/0:36,0:37:80.80:0,81,866	1/1:1,16:17:35.98:313,36,0	0/0:25,0:27:77.97:0,78,812	0/0:23,0:23:66.18:0,66,730	0/0:16,0:16:45.11:0,45,491	0/0:18,1:19:25.05:0,25,485	0/0:14,0:14:39.11:0,39,431	0/0:17,0:17:48.11:0,48,522	0/0:19,1:20:19.07:0,19,439	0/0:21,0:21:60.16:0,60,663	0/0:15,0:15:39:0,39,413	0/0:11,0:12:26.91:0,27,280	0/0:27,0:27:72.19:0,72,793	0/0:8,0:8:21.06:0,21,232	0/0:20,0:20:60.15:0,60,653	0/0:17,0:17:44.95:0,45,479	0/0:23,0:23:66.14:0,66,710	0/0:21,0:21:57.15:0,57,630	0/1:5,13:18:50.60:288,0,51	0/0:42,0:42:99:0,117,1282	1/1:1,16:17:44.98:391,45,0
chr10	63485820	.	GAA	G	1511.94	PASS	AB=0.990;AC=16;AF=0.286;AN=56;BaseQRankSum=9.155;DP=472;FS=0.557;HRun=14;HaplotypeScore=89.3568;InbreedingCoeff=0.3140;MQ=49.79;MQ0=9;MQRankSum=-1.467;QD=7.45;ReadPosRankSum=5.012;VQSLOD=0.7628;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:9,1:32:7.23:0,7,170	1/1:0,6:6:11.92:94,12,0	0/0:10,0:4:5.60:0,6,43	0/1:15,0:7:14.60:15,0,68	0/0:16,0:26:23.34:0,23,187	0/0:12,0:12:6.86:0,7,74	0/1:15,0:14:0.87:1,0,45	1/1:5,20:27:68.14:588,68,0	0/0:10,0:10:2.53:0,3,16	0/0:20,0:18:13.24:0,13,127	0/0:23,0:23:3.93:0,4,71	0/1:15,0:15:5.70:6,0,24	1/1:17,0:17:0.35:3,0,0	0/0:15,0:15:0.43:0,0,31	0/0:6,0:6:5.79:0,6,38	0/0:14,0:14:11.10:0,11,93	1/1:7,20:27:53.81:493,54,0	1/1:6,20:27:46.94:454,47,0	0/1:12,0:12:0.95:1,0,53	0/0:20,0:19:6.33:0,6,66	0/0:15,0:14:7.39:0,7,45	0/1:16,0:16:6.43:6,0,47	0/0:16,0:16:2.06:0,2,19	0/0:10,0:10:0.47:0,0,1	0/0:23,0:23:13.31:0,13,113	0/0:15,0:13:5.82:0,6,40	0/1:25,0:25:1.76:2,0,37	0/0:2,0:2:4.23:0,4,26
chr10	63485831	.	AAAATAAAT	A	4274.07	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=1.519;DP=492;FS=7.926;HRun=0;HaplotypeScore=125.7741;InbreedingCoeff=0.8523;MQ=56.14;MQ0=8;MQRankSum=-5.012;QD=14.94;ReadPosRankSum=1.457;VQSLOD=3.5274;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:87.30:0,87,2433	0/0:6,0:6:12.04:0,12,286	0/0:18,0:9:23.95:0,24,476	0/0:18,0:9:24.07:0,24,508	0/0:25,0:25:63.22:0,63,1696	1/1:16,0:16:15.04:203,15,0	1/1:12,1:13:12:202,12,0	0/0:36,0:34:95.95:0,96,2110	1/1:10,0:10:9:115,9,0	1/1:24,0:22:26.84:412,27,0	1/1:21,0:21:29.95:349,30,0	1/1:16,2:18:20.96:323,21,0	1/1:10,1:11:9.01:129,9,0	1/1:16,0:16:8.99:160,9,0	0/0:6,0:6:0:0,0,0	1/1:11,0:11:14.97:220,15,0	0/0:32,0:32:81.12:0,81,1780	0/0:27,0:28:72.24:0,72,1617	1/1:12,0:12:23.99:340,24,0	1/1:19,0:18:29.96:359,30,0	1/1:14,0:13:5.89:88,6,0	1/1:13,0:13:17.55:209,18,0	1/1:18,0:18:23.85:249,24,0	1/1:9,0:9:3:27,3,0	1/1:19,0:19:8.88:104,9,0	1/1:16,0:14:24.05:359,24,0	1/1:26,0:26:26.27:426,26,0	0/0:2,0:2:2.97:0,3,20
chr10	63485832	.	AAATAAAT	A	5848.87	PASS	AB=0.568;AC=38;AF=0.679;AN=56;BaseQRankSum=-2.858;DP=487;FS=4.882;HRun=0;HaplotypeScore=111.9684;InbreedingCoeff=0.7595;MQ=56.39;MQ0=7;MQRankSum=-4.555;QD=20.17;ReadPosRankSum=0.272;VQSLOD=4.1354;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:87.11:0,87,2115	0/0:6,0:6:12.04:0,12,245	0/0:18,0:9:23.68:0,24,422	0/0:19,0:10:27.03:0,27,500	0/0:25,0:25:67.22:0,67,1494	0/1:4,12:16:1.13:305,0,1	0/1:3,10:13:4.12:221,0,4	0/0:37,0:35:86.47:0,86,1876	1/1:2,8:10:9.92:183,10,0	1/1:21,4:23:33.54:573,34,0	1/1:3,17:20:30.06:453,30,0	1/1:4,14:18:21.07:404,21,0	1/1:11,0:11:9.03:138,9,0	1/1:3,13:16:9.03:167,9,0	1/1:5,1:6:3:26,3,0	1/1:7,4:11:15.94:354,16,0	0/0:29,0:29:81.12:0,81,1554	0/0:28,0:28:72.24:0,72,1403	1/1:4,7:11:24.08:461,24,0	1/1:7,11:18:30.95:467,31,0	1/1:3,11:13:10.26:169,10,0	1/1:12,1:13:7.52:281,8,0	1/1:16,1:17:24.07:310,24,0	1/1:9,0:9:3.01:41,3,0	1/1:7,12:19:10.27:174,10,0	1/1:4,11:14:27.04:480,27,0	1/1:6,20:26:27.31:619,27,0	1/1:2,0:2:3.45:23,3,0
chr10	63485833	.	AATAAAT	A	5417	PASS	AB=0.971;AC=38;AF=0.679;AN=56;BaseQRankSum=-1.402;DP=489;FS=4.724;HRun=0;HaplotypeScore=107.0808;InbreedingCoeff=0.7251;MQ=56.50;MQ0=7;MQRankSum=-5.238;QD=18.81;ReadPosRankSum=-0.912;VQSLOD=4.0915;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:71.17:0,71,1822	0/0:6,0:6:12.04:0,12,224	0/0:18,0:9:12.21:0,12,346	0/0:19,0:10:26.97:0,27,438	0/0:26,0:26:54.91:0,55,1307	0/1:15,1:16:3.15:258,0,3	0/1:13,0:13:9.42:182,0,9	0/0:38,0:36:74.32:0,74,1731	1/1:9,1:10:10.28:174,10,0	1/1:24,0:22:36.93:553,37,0	1/1:20,0:20:30.06:412,30,0	1/1:17,1:18:21.07:356,21,0	1/1:1,10:11:9.03:183,9,0	1/1:16,0:16:9.03:144,9,0	1/1:5,0:5:2.37:8,2,0	1/1:12,0:12:21.04:337,21,0	0/0:30,0:30:84.13:0,84,1449	0/0:29,0:29:75.25:0,75,1335	1/1:11,0:11:24.97:392,25,0	1/1:16,1:18:31.31:455,31,0	1/1:14,0:13:10.21:117,10,0	1/1:3,9:12:2.77:327,3,0	1/1:3,14:17:24.03:375,24,0	1/1:0,9:9:3.01:66,3,0	1/1:19,0:19:10.85:154,11,0	1/1:15,0:14:27.04:426,27,0	1/1:26,0:26:28.14:475,28,0	1/1:2,0:2:3.87:24,4,0
chr10	63485834	.	AT	A	1776.67	PASS	AB=1.000;AC=39;AF=0.696;AN=56;BaseQRankSum=7.026;DP=462;FS=1.999;HRun=1;HaplotypeScore=83.2306;InbreedingCoeff=0.6350;MQ=57.71;MQ0=7;MQRankSum=-3.905;QD=6.35;ReadPosRankSum=-0.886;VQSLOD=0.2955;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,1:35:0.46:0,0,211	0/0:6,0:6:11.15:0,11,51	0/0:18,0:9:4.07:0,4,114	0/1:19,0:10:0.26:0,0,165	0/0:26,0:26:34.90:0,35,298	0/1:14,0:14:6.04:53,0,6	0/1:13,0:13:3.25:47,0,3	0/0:38,0:36:72.99:0,73,499	1/1:9,0:9:8.54:43,9,0	1/1:21,1:20:38.68:287,39,0	1/1:19,0:19:26.15:158,26,0	1/1:17,0:17:19.75:103,20,0	1/1:11,0:11:8.55:44,9,0	1/1:13,2:15:8.61:48,9,0	1/1:1,0:5:2.50:9,2,0	1/1:9,2:11:20.10:117,20,0	0/0:30,0:30:72.64:0,73,410	0/0:29,0:29:61.51:0,62,346	1/1:9,0:9:24.32:143,24,0	1/1:15,1:16:27.90:173,28,0	1/1:13,0:12:10.21:42,10,0	1/1:11,0:11:8.89:133,9,0	1/1:15,0:16:23.16:156,23,0	1/1:9,0:9:2.90:16,3,0	1/1:12,0:13:8.59:51,9,0	1/1:13,0:12:26.33:186,26,0	1/1:22,1:23:25.05:123,25,0	1/1:2,0:2:5.02:28,5,0
chr10	63486210	.	ATTT	A	9873.15	PASS	AB=0.585;AC=41;AF=0.732;AN=56;BaseQRankSum=-7.662;DP=538;FS=2.732;HRun=14;HaplotypeScore=122.1262;InbreedingCoeff=0.8289;MQ=74.80;MQ0=4;MQRankSum=-4.459;QD=25.06;ReadPosRankSum=3.608;VQSLOD=3.9406;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:2,0:22:26.66:0,27,74	0/0:0,0:3:2.96:0,3,7	0/0:39,0:21:22.81:0,23,585	0/0:38,0:22:17.03:0,17,276	0/0:1,0:20:6.48:0,6,25	1/1:2,15:18:48.05:542,48,0	1/1:5,12:18:34.63:418,35,0	0/1:7,1:24:24.58:25,0,37	1/1:5,5:10:14.99:175,15,0	1/1:4,15:20:43.62:523,44,0	1/1:3,16:21:47.01:539,47,0	1/1:4,15:19:39.04:455,39,0	1/1:1,12:13:36.10:421,36,0	1/1:2,12:15:37.63:442,38,0	1/1:2,22:24:57.15:666,57,0	1/1:2,12:14:36.07:421,36,0	0/0:3,0:12:12.10:0,12,26	0/0:3,0:10:7.48:0,7,16	1/1:3,8:12:22.55:268,23,0	1/1:1,19:20:59.39:672,59,0	1/1:1,17:18:39.04:451,39,0	1/1:1,15:16:42.05:489,42,0	1/1:4,24:28:69.12:803,69,0	1/1:4,18:22:38.49:453,38,0	1/1:3,18:22:43.84:522,44,0	1/1:2,26:28:75.12:877,75,0	1/1:5,21:27:49.53:570,50,0	1/1:0,4:4:12.04:140,12,0
chr10	63486272	.	AG	A	12346.37	PASS	AB=0.842;AC=54;AF=0.964;AN=56;BaseQRankSum=-1.065;DP=566;FS=5.767;HRun=1;HaplotypeScore=154.0983;InbreedingCoeff=-0.0373;MQ=58.88;MQ0=0;MQRankSum=-4.074;QD=21.81;ReadPosRankSum=3.235;VQSLOD=4.9547;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:17,8:25:46.77:519,47,0	1/1:8,0:8:21.06:232,21,0	0/1:13,3:15:73.63:74,0,251	0/1:13,3:15:50.58:51,0,167	1/1:15,11:26:72.93:646,73,0	1/1:8,6:14:40.81:342,41,0	1/1:5,7:12:35.21:347,35,0	1/1:17,11:28:73.35:730,73,0	1/1:8,9:17:49.18:371,49,0	1/1:13,14:27:75.63:749,76,0	1/1:9,13:22:61.52:444,62,0	1/1:4,6:10:28.81:235,29,0	1/1:10,8:18:52.48:439,52,0	1/1:13,12:25:66.33:511,66,0	1/1:11,11:22:58.48:459,58,0	1/1:14,6:20:58.75:536,59,0	1/1:14,8:22:59.45:569,59,0	1/1:6,7:13:35.49:301,35,0	1/1:7,11:18:36:293,36,0	1/1:16,8:24:67.02:563,67,0	1/1:17,7:24:61.41:520,61,0	1/1:8,8:16:46.10:362,46,0	1/1:8,12:20:56.72:417,57,0	1/1:16,6:22:41.16:362,41,0	1/1:9,12:21:60.52:475,61,0	1/1:15,19:34:99:841,100,0	1/1:21,14:35:93.20:784,93,0	1/1:8,3:11:26.18:178,26,0
chr10	63486274	.	AC	A	3579.50	PASS	AB=0.967;AC=51;AF=0.911;AN=56;BaseQRankSum=-5.007;DP=572;FS=2.849;HRun=1;HaplotypeScore=184.7138;InbreedingCoeff=0.2422;MQ=59.93;MQ0=0;MQRankSum=10.116;QD=6.45;ReadPosRankSum=4.468;VQSLOD=0.9803;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:27:18.49:185,18,0	1/1:7,0:7:18.81:78,19,0	0/0:16,1:16:6.31:0,6,281	0/1:18,0:17:14.25:14,0,220	1/1:26,0:26:43.79:179,44,0	1/1:13,1:14:21.34:127,21,0	1/1:13,0:13:19.45:90,19,0	0/1:24,3:27:12.71:147,0,13	1/1:17,0:17:15.07:86,15,0	1/1:28,1:29:32.89:219,33,0	1/1:21,0:21:1.87:93,2,0	1/1:11,0:11:10.07:64,10,0	1/1:18,1:19:21.99:137,22,0	1/1:25,0:25:20.01:126,20,0	1/1:21,1:22:17.47:136,17,0	1/1:19,1:20:36.43:192,36,0	1/1:20,1:21:33.65:142,34,0	1/1:13,0:13:16.83:71,17,0	1/1:19,2:21:15.23:127,15,0	1/1:21,0:21:19.72:105,20,0	1/1:23,1:24:36.32:219,36,0	1/1:18,0:18:21.12:144,21,0	0/1:19,0:19:3.88:42,0,4	1/1:21,1:22:6.53:116,7,0	1/1:21,0:21:18.53:141,19,0	1/1:33,0:33:38.86:247,39,0	1/1:35,0:35:33.92:170,34,0	1/1:11,0:11:18.92:181,19,0
chr10	63486275	.	C	CA	12587.07	PASS	AB=0.972;AC=54;AF=0.964;AN=56;BaseQRankSum=-2.168;DP=576;FS=0.816;HRun=2;HaplotypeScore=156.8257;InbreedingCoeff=-0.0291;MQ=60.75;MQ0=0;MQRankSum=-4.386;QD=21.85;ReadPosRankSum=4.567;VQSLOD=4.8614;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:19,8:27:46.94:580,47,0	1/1:7,0:7:21.06:241,21,0	0/1:16,1:16:20.88:21,0,143	0/1:19,0:18:86.71:87,0,103	1/1:15,10:25:70.23:649,70,0	1/1:9,5:14:38.22:336,38,0	1/1:9,4:13:29.38:276,29,0	1/1:17,9:26:55.74:530,56,0	1/1:8,9:17:49.71:396,50,0	1/1:17,12:29:76.50:757,77,0	1/1:10,12:22:59.35:438,59,0	1/1:7,5:12:29.04:226,29,0	1/1:14,6:20:49.84:410,50,0	1/1:13,12:25:67.55:545,68,0	1/1:12,10:22:58.47:499,58,0	1/1:15,5:20:56.34:557,56,0	1/1:15,7:22:50.60:492,51,0	1/1:7,7:14:35.62:316,36,0	1/1:11,10:21:47.74:464,48,0	1/1:13,8:21:58.46:497,58,0	1/1:18,6:24:64.80:593,65,0	1/1:10,8:18:52.35:469,52,0	1/1:7,12:19:53.99:383,54,0	1/1:16,6:22:46.83:406,47,0	1/1:9,12:21:61.17:530,61,0	1/1:16,17:33:94.82:849,95,0	1/1:22,13:35:91.52:784,92,0	1/1:8,3:11:26.52:256,27,0
chr10	63487563	.	AGAG	A	1520.86	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=8.773;DP=714;FS=3.101;HRun=0;HaplotypeScore=66.5624;InbreedingCoeff=0.8703;MQ=56.43;MQ0=81;MQRankSum=1.141;QD=9.45;ReadPosRankSum=-0.191;VQSLOD=2.9166;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:39:72.23:0,72,1551	0/0:11,0:7:11.91:0,12,218	1/1:37,0:7:2.06:19,2,0	0/1:45,0:7:1.58:2,0,64	0/0:15,0:15:18.06:0,18,386	0/0:23,0:21:39.12:0,39,840	0/0:24,0:20:24.08:0,24,543	0/0:28,0:12:30.05:0,30,426	0/0:24,0:24:48.16:0,48,1046	0/0:33,0:29:75.21:0,75,1588	0/0:21,0:20:39.13:0,39,883	0/0:29,0:28:63.19:0,63,1261	1/1:2,20:22:30.10:499,30,0	0/0:14,0:13:24.08:0,24,544	0/0:31,0:30:63.15:0,63,1272	0/0:32,0:32:66.23:0,66,1496	0/0:33,0:29:48.16:0,48,1085	0/0:17,0:14:27.09:0,27,611	0/0:17,0:8:21.05:0,21,392	0/0:26,0:18:39.12:0,39,817	0/0:29,0:26:33.11:0,33,723	1/1:2,16:17:21:318,21,0	1/1:2,13:15:27.09:449,27,0	1/1:1,23:24:24.08:399,24,0	0/0:28,0:23:42.14:0,42,883	0/0:34,0:32:90.20:0,90,1950	0/0:27,0:27:63.10:0,63,1376	0/0:11,0:8:21.07:0,21,413
chr10	63488474	.	A	AAAC	1020.27	PASS	AB=1.000;AC=7;AF=0.130;AN=54;BaseQRankSum=1.972;DP=294;FS=2.031;HRun=0;HaplotypeScore=55.3622;InbreedingCoeff=0.7000;MQ=68.74;MQ0=5;MQRankSum=1.730;QD=22.18;ReadPosRankSum=-0.135;VQSLOD=3.1564;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:40.38:0,40,559	0/0:9,0:9:24.08:0,24,333	0/1:20,0:10:14.63:15,0,67	0/0:11,0:6:9.50:0,10,119	0/0:24,0:24:60.19:0,60,824	0/0:14,0:14:33.11:0,33,470	0/0:6,0:6:14.78:0,15,183	0/0:20,0:20:36.09:0,36,482	1/1:2,6:9:15.05:303,15,0	0/0:9,0:9:21.07:0,21,297	0/0:1,0:1:3.01:0,3,43	0/0:11,0:11:27.08:0,27,358	0/0:7,0:7:18.06:0,18,254	0/0:10,0:10:27.09:0,27,379	0/0:8,0:8:18.06:0,18,254	0/0:5,0:5:15.05:0,15,205	0/0:23,0:22:47.27:0,47,645	0/0:29,0:29:80.33:0,80,1129	0/0:17,0:16:21.07:0,21,293	0/0:3,0:3:9.03:0,9,128	0/0:4,0:3:12.04:0,12,171	./.	0/0:5,0:5:15.05:0,15,211	0/0:6,0:6:15.05:0,15,214	0/0:6,0:6:15.05:0,15,206	1/1:0,12:12:33.11:660,33,0	0/0:4,0:4:12.04:0,12,171	1/1:1,3:5:9.03:182,9,0
chr10	63488538	.	CT	C	473.84	PASS	AB=0.872;AC=28;AF=0.538;AN=52;BaseQRankSum=4.145;DP=242;FS=0.000;HRun=14;HaplotypeScore=33.8984;InbreedingCoeff=0.5708;MQ=62.53;MQ0=1;MQRankSum=-2.822;QD=4.43;ReadPosRankSum=2.515;VQSLOD=-0.3026;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:14,3:17:11.19:11,0,176	0/0:9,0:9:15.01:0,15,135	0/0:11,0:7:8.60:0,9,64	0/0:8,0:7:11.77:0,12,85	0/0:13,1:17:8.93:0,9,169	1/1:1,6:7:11.87:82,12,0	1/1:0,5:6:13.94:88,14,0	0/0:26,0:26:39.47:0,39,350	0/0:6,0:6:5.99:0,6,51	1/1:4,1:6:4.98:26,5,0	1/1:3,0:3:2.92:20,3,0	1/1:3,6:9:8.82:62,9,0	0/0:3,0:3:0:0,0,0	0/0:6,0:7:2.11:0,2,37	1/1:3,3:6:2.97:21,3,0	1/1:1,2:3:5.95:41,6,0	0/1:14,2:17:5.34:5,0,212	0/0:29,2:31:24.81:0,25,483	1/1:8,1:9:5.89:41,6,0	1/1:1,3:4:5.91:41,6,0	1/1:2,7:9:11.89:82,12,0	./.	./.	1/1:0,5:6:10.75:67,11,0	1/1:2,1:3:2.93:21,3,0	0/0:7,0:7:6.48:0,6,57	1/1:0,2:2:5.94:41,6,0	0/0:9,0:9:17.99:0,18,157
chr10	63495673	.	TCATTTACCAACCACGGTAG	T	736.64	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.678;DP=680;FS=14.641;HRun=0;HaplotypeScore=327.7865;InbreedingCoeff=0.9423;MQ=88.93;MQ0=0;MQRankSum=-5.442;QD=20.46;ReadPosRankSum=-3.751;VQSLOD=-0.0124;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:10,12:22:23.75:700,24,0	0/0:13,0:13:39.13:0,39,3446	0/0:36,0:36:99:0,105,6574	0/0:21,0:20:60.21:0,60,3611	1/1:7,7:14:6.03:148,6,0	0/0:19,0:19:54.19:0,54,3984	0/0:19,0:19:54.18:0,54,4490	0/0:34,0:34:99:0,99,6564	0/0:30,0:30:90.31:0,90,7563	0/0:21,0:21:63.22:0,63,4422	0/0:15,0:15:45.15:0,45,3541	0/0:29,0:29:84.29:0,84,7109	0/0:23,0:23:69.24:0,69,5756	0/0:27,0:27:78.27:0,78,6529	0/0:33,0:33:99:0,99,8357	0/0:26,0:25:78.27:0,78,5887	0/0:30,0:30:90.31:0,90,7527	0/0:19,0:19:57.20:0,57,4920	0/0:15,0:15:42.14:0,42,2383	0/0:13,0:13:39.13:0,39,3127	0/0:53,0:53:99:0,154,11795	0/0:24,0:24:69.24:0,69,5146	0/0:16,0:16:45.15:0,45,3798	0/0:34,0:34:99:0,102,8892	0/0:20,0:20:60.16:0,60,4493	0/0:20,0:20:54.19:0,54,4479	0/0:36,0:35:99:0,108,8649	0/0:18,0:18:54.19:0,54,4405
chr10	63497494	.	AT	A	455.89	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.191;DP=632;FS=0.882;HRun=7;HaplotypeScore=110.9414;InbreedingCoeff=0.9660;MQ=88.81;MQ0=0;MQRankSum=-1.450;QD=25.33;ReadPosRankSum=-0.406;VQSLOD=2.8725;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,125,935	0/0:10,0:10:26.76:0,27,186	0/0:23,0:23:51.95:0,52,697	0/0:23,0:23:54:0,54,631	0/0:25,0:24:74.46:0,74,535	0/0:15,0:15:38.68:0,39,273	0/0:27,0:27:71.43:0,71,507	0/0:30,0:30:82.34:0,82,509	1/1:0,18:18:54.12:551,54,0	0/0:19,0:19:55.79:0,56,343	0/0:9,0:9:23.80:0,24,166	0/0:22,0:22:62.57:0,63,456	0/0:20,0:20:56.63:0,57,410	0/0:22,0:22:65.50:0,65,464	0/0:30,0:30:89.25:0,89,627	0/0:16,0:16:44.63:0,45,314	0/0:25,0:25:71.50:0,72,520	0/0:24,0:24:68.40:0,68,478	0/0:16,0:16:41.38:0,41,280	0/0:23,0:23:62.57:0,63,474	0/0:49,0:49:99:0,137,980	0/0:17,0:17:44.65:0,45,315	0/0:15,0:15:32.78:0,33,237	0/0:38,0:38:99:0,108,766	0/0:22,0:22:56.51:0,57,395	0/0:34,0:34:88.47:0,88,559	0/0:12,0:12:35.74:0,36,258	0/0:4,0:4:11.92:0,12,86
chr10	63497627	.	CAA	C	1318.11	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-0.823;DP=610;FS=2.229;HRun=4;HaplotypeScore=100.4072;InbreedingCoeff=0.9877;MQ=81.40;MQ0=0;MQRankSum=-1.297;QD=34.69;ReadPosRankSum=0.126;VQSLOD=3.0220;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,129,2417	0/0:9,0:9:24.08:0,24,445	0/0:19,0:18:45.15:0,45,787	0/0:19,0:19:45.04:0,45,810	0/0:23,0:23:69.23:0,69,1255	0/0:17,0:17:48.16:0,48,895	0/0:28,0:28:84.26:0,84,1500	0/0:21,0:21:54.19:0,54,1006	1/1:0,10:10:27.05:373,27,0	0/0:31,0:31:90.31:0,90,1669	0/0:13,0:13:39.13:0,39,709	0/0:25,0:25:72.25:0,72,1343	0/0:20,0:20:60.19:0,60,1094	0/0:19,0:19:54.19:0,54,1011	0/0:16,0:16:48.16:0,48,896	0/0:25,0:25:75.25:0,75,1374	0/0:30,0:30:90.31:0,90,1684	0/0:28,0:28:84.27:0,84,1523	0/0:15,0:15:42.14:0,42,784	0/0:17,0:17:51.17:0,51,951	0/0:42,0:42:99:0,126,2360	0/0:19,0:19:51.13:0,51,919	0/0:18,0:18:51.17:0,51,953	0/0:45,0:44:99:0,135,2523	0/0:14,0:14:42.13:0,42,710	1/1:1,23:24:63.09:907,63,0	0/0:16,0:16:42.14:0,42,765	1/1:0,4:4:12.04:177,12,0
chr10	63498479	.	A	ATATGTATGTATG	7514.05	PASS	AB=0.778;AC=32;AF=0.593;AN=54;BaseQRankSum=-2.924;DP=675;FS=0.000;HRun=0;HaplotypeScore=231.0783;InbreedingCoeff=0.7747;MQ=55.95;MQ0=10;MQRankSum=-5.018;QD=17.23;ReadPosRankSum=-1.850;VQSLOD=3.5606;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:50.85:0,51,1416	0/0:4,0:7:6.01:0,6,111	0/1:11,0:4:0:0,0,0	./.	0/0:44,0:44:63.19:0,63,1769	1/1:21,0:21:9.01:188,9,0	1/1:16,0:15:11.21:146,11,0	1/1:50,0:47:1.25:3,1,0	0/1:3,0:14:25.77:26,0,33	1/1:22,10:33:39.07:1494,39,0	1/1:14,9:24:12.04:497,12,0	1/1:16,0:16:9.02:335,9,0	0/0:17,0:17:30.09:0,30,915	1/1:10,4:15:15.05:784,15,0	1/1:17,9:29:15.05:832,15,0	1/1:18,0:18:8.99:74,9,0	0/0:20,0:32:27.98:0,28,701	0/0:12,0:21:21.07:0,21,552	1/1:33,0:32:27.07:639,27,0	1/1:37,0:37:24.05:823,24,0	1/1:9,0:9:9.01:274,9,0	0/0:10,0:10:24.07:0,24,712	0/0:12,0:12:27.05:0,27,695	0/0:15,0:15:27.09:0,27,727	1/1:13,0:34:19.03:465,19,0	1/1:24,0:42:2.24:308,2,0	1/1:18,11:32:12.04:627,12,0	0/0:11,0:25:17.10:0,17,40
chr10	63499945	.	T	TGCTAGGCAAGC	34579.90	PASS	AC=46;AF=0.852;AN=54;BaseQRankSum=-2.954;DP=470;FS=9.041;HRun=0;HaplotypeScore=142.2001;InbreedingCoeff=0.9360;MQ=45.42;MQ0=1;MQRankSum=-12.740;QD=102.01;ReadPosRankSum=-0.832;VQSLOD=4.5935;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,105,3507	1/1:3,3:6:15.05:722,15,0	0/0:24,0:19:49.86:0,50,1384	0/0:30,0:26:58.73:0,59,1466	0/0:32,0:32:90.29:0,90,2804	1/1:8,2:12:21.07:860,21,0	1/1:8,7:18:39.13:2067,39,0	1/1:14,0:14:24.07:581,24,0	1/1:4,9:15:39.13:2044,39,0	1/1:13,3:16:36.12:1482,36,0	1/1:3,1:4:9.03:461,9,0	1/1:4,3:8:15.05:740,15,0	1/1:7,5:14:36.12:1821,36,0	1/1:5,7:14:33.11:1633,33,0	1/1:6,13:20:57.20:2750,57,0	1/1:5,3:8:21.07:1125,21,0	1/1:13,7:22:45.15:2355,45,0	1/1:8,4:13:36.12:1978,36,0	1/1:16,2:20:39.13:1382,39,0	1/1:11,2:17:21.07:792,21,0	1/1:20,2:21:27.09:1407,27,0	1/1:3,2:5:6.02:225,6,0	./.	1/1:8,2:11:17.89:999,18,0	1/1:12,0:14:21.07:917,21,0	1/1:18,10:28:75.26:3562,75,0	1/1:10,17:30:78.27:3893,78,0	1/1:1,4:5:15.05:784,15,0
chr10	63501027	.	TA	T	6203.29	PASS	AB=0.536;AC=33;AF=0.589;AN=56;BaseQRankSum=5.893;DP=563;FS=3.646;HRun=10;HaplotypeScore=59.5882;InbreedingCoeff=0.9171;MQ=66.98;MQ0=8;MQRankSum=0.150;QD=19.88;ReadPosRankSum=2.971;VQSLOD=5.8914;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:30:81.19:0,81,877	0/0:9,0:9:21.06:0,21,232	0/0:19,0:12:26.91:0,27,257	0/0:15,0:8:10.56:0,11,175	0/0:28,0:27:57.05:0,57,613	1/1:1,16:17:38.99:339,39,0	1/1:4,12:15:35.98:312,36,0	0/0:33,0:33:84.02:0,84,880	0/0:21,0:21:36.10:0,36,398	1/1:4,29:33:86.73:732,87,0	1/1:4,25:29:74.84:639,75,0	1/1:1,16:17:38.99:339,39,0	1/1:2,11:13:26.99:234,27,0	1/1:0,8:8:24:208,24,0	0/1:2,12:15:7.15:162,0,7	1/1:4,16:20:35.99:313,36,0	0/0:17,0:17:48.10:0,48,512	0/0:31,0:31:84.23:0,84,928	1/1:6,13:18:8.78:300,9,0	1/1:1,32:34:92.94:801,93,0	1/1:0,6:6:12:104,12,0	1/1:0,10:10:20.99:182,21,0	1/1:0,15:15:41.99:365,42,0	1/1:2,12:14:32.99:286,33,0	1/1:3,17:20:44.99:391,45,0	0/0:32,3:35:37.23:0,37,796	1/1:5,21:26:56.98:495,57,0	0/0:10,0:10:27.03:0,27,277
chr10	63501149	.	AAG	A	575.37	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.208;DP=563;FS=0.951;HRun=0;HaplotypeScore=67.5579;InbreedingCoeff=0.9891;MQ=76.66;MQ0=0;MQRankSum=-1.443;QD=28.77;ReadPosRankSum=0.153;VQSLOD=4.5586;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:63.19:0,63,1073	0/0:6,0:6:18.06:0,18,315	0/0:14,0:14:30.09:0,30,487	0/0:14,0:14:29.82:0,30,489	0/0:16,0:16:39.13:0,39,684	0/0:16,0:16:45.13:0,45,726	0/0:22,0:22:60.21:0,60,1048	0/0:29,0:29:78.22:0,78,1239	1/1:1,19:20:51.14:670,51,0	0/0:32,0:32:90.30:0,90,1553	0/0:14,0:14:42.13:0,42,709	0/0:18,0:18:51.15:0,51,824	0/0:26,0:26:72.25:0,72,1262	0/0:27,0:27:75.24:0,75,1255	0/0:24,0:24:72.21:0,72,1205	0/0:19,0:19:54.17:0,54,919	0/0:29,0:29:78.18:0,78,1224	0/0:26,0:26:72.25:0,72,1258	0/0:13,0:13:33.08:0,33,491	0/0:17,0:17:45.15:0,45,788	0/0:27,0:27:69.24:0,69,1210	0/0:15,0:15:42.14:0,42,729	0/0:10,0:10:27.03:0,27,412	0/0:32,0:32:96.31:0,96,1640	0/0:13,0:13:39.12:0,39,648	0/0:29,0:29:84.29:0,84,1466	0/0:21,0:21:60.15:0,60,990	0/0:10,0:10:30.07:0,30,469
chr10	63501313	.	TA	T	11919.51	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=14.272;DP=688;FS=0.000;HRun=8;HaplotypeScore=93.5267;InbreedingCoeff=0.9992;MQ=84.22;MQ0=0;MQRankSum=-4.588;QD=24.18;ReadPosRankSum=5.419;VQSLOD=4.7705;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,99,1159	0/0:12,0:12:36.11:0,36,435	0/0:25,0:25:54.10:0,54,607	0/0:25,0:25:29.63:0,30,565	0/0:29,0:29:75.21:0,75,885	1/1:5,19:24:57.09:550,57,0	1/1:2,26:28:66.10:637,66,0	0/0:30,0:30:75.23:0,75,906	1/1:2,19:21:54.08:521,54,0	1/1:1,16:18:50.11:469,50,0	1/1:0,17:17:42.07:406,42,0	1/1:5,28:33:75.11:724,75,0	1/1:5,19:24:54.08:521,54,0	1/1:2,30:32:84.13:811,84,0	1/1:2,32:34:90.14:869,90,0	1/1:2,20:22:54.08:522,54,0	0/0:24,0:24:66.20:0,66,796	0/0:16,0:16:39.12:0,39,469	1/1:0,18:18:54.09:521,54,0	1/1:0,26:26:75.12:724,75,0	1/1:3,24:27:66.11:637,66,0	1/1:1,19:20:54.08:521,54,0	1/1:1,15:16:45.07:435,45,0	1/1:0,24:24:69.11:666,69,0	1/1:3,21:24:57.09:551,57,0	1/1:3,38:40:74.88:992,75,0	1/1:6,29:35:66.09:638,66,0	1/1:0,9:9:21.03:203,21,0
chr10	63501559	.	T	TAGAA	1422.37	PASS	AB=0.942;AC=20;AF=0.400;AN=50;BaseQRankSum=1.757;DP=566;FS=2.675;HRun=0;HaplotypeScore=92.5014;InbreedingCoeff=0.6499;MQ=66.51;MQ0=2;MQRankSum=-0.055;QD=5.85;ReadPosRankSum=-4.495;VQSLOD=0.3907;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:17,1:17:12:144,12,0	1/1:10,1:11:6.02:136,6,0	./.	0/1:21,0:13:0:0,0,0	1/1:15,5:22:17.85:207,18,0	0/0:20,0:20:21.04:0,21,270	0/1:20,0:20:0:0,0,0	./.	0/0:24,0:23:8.94:0,9,69	0/0:14,0:18:12.01:0,12,110	0/0:9,0:9:11.99:0,12,101	0/0:21,0:21:18.02:0,18,207	0/0:18,0:24:8.85:0,9,70	0/0:21,0:21:15.02:0,15,182	1/1:22,7:29:6.02:137,6,0	0/0:24,0:24:18.06:0,18,267	1/1:25,0:24:24.03:326,24,0	1/1:16,5:23:6.02:121,6,0	0/0:22,0:21:9.01:0,9,99	0/0:19,0:19:23.32:0,23,279	./.	0/0:16,0:16:12.02:0,12,141	1/1:13,0:13:6.02:137,6,0	0/1:14,5:20:14.84:128,0,15	0/0:10,0:13:6.01:0,6,56	0/1:34,0:33:3.07:204,0,3	0/0:40,0:40:32.96:0,33,380	1/1:7,0:7:5.38:53,5,0
chr10	63503244	.	TA	T	14914.98	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=14.990;DP=583;FS=1.898;HRun=1;HaplotypeScore=69.8707;InbreedingCoeff=0.9950;MQ=75.10;MQ0=0;MQRankSum=-0.855;QD=37.19;ReadPosRankSum=5.805;VQSLOD=5.0763;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:96.29:0,96,1356	0/0:7,0:7:21.03:0,21,262	0/0:16,0:16:45.09:0,45,569	0/0:6,1:7:14.76:0,15,196	0/0:24,0:24:69.23:0,69,1005	1/1:0,23:23:60.20:837,60,0	1/1:0,13:13:30.10:419,30,0	0/0:40,0:40:99:0,120,1615	1/1:0,12:12:36.12:502,36,0	1/1:0,24:24:69.21:945,69,0	1/1:0,23:23:69.19:941,69,0	1/1:0,16:16:39.13:544,39,0	1/1:0,20:20:57.19:793,57,0	1/1:0,20:20:45.15:628,45,0	1/1:0,16:16:42.14:586,42,0	1/1:0,16:16:36.12:502,36,0	0/0:29,0:29:84.24:0,84,1187	0/0:27,0:27:81.21:0,81,1122	1/1:0,21:21:63.16:827,63,0	1/1:0,25:25:72.16:961,72,0	1/1:0,24:24:63.21:879,63,0	1/1:0,14:14:36.08:480,36,0	1/1:0,19:19:54.18:753,54,0	1/1:0,20:20:57.19:794,57,0	1/1:0,34:34:90.30:1256,90,0	1/1:0,26:26:78.22:1052,78,0	1/1:0,27:27:69.23:962,69,0	1/1:0,8:8:18.06:251,18,0
chr10	63503807	.	C	CA	23232.59	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-16.493;DP=854;FS=5.782;HRun=3;HaplotypeScore=78.7159;InbreedingCoeff=1.0000;MQ=85.25;MQ0=0;MQRankSum=-5.056;QD=37.90;ReadPosRankSum=5.599;VQSLOD=4.7804;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,114,1327	0/0:12,0:12:36.10:0,36,422	0/0:28,0:28:78.15:0,78,904	0/0:34,0:34:80.57:0,81,910	0/0:30,0:30:75.22:0,75,890	1/1:0,28:28:75.25:1050,75,0	1/1:2,34:36:87.29:1215,87,0	0/0:38,0:38:99:0,108,1274	1/1:0,27:27:81.27:1134,81,0	1/1:1,30:31:90.30:1261,90,0	1/1:3,19:22:51.17:705,51,0	1/1:2,33:35:96.32:1345,96,0	1/1:0,32:32:93.31:1302,93,0	1/1:3,43:46:99:1716,123,0	1/1:2,23:25:63.21:882,63,0	1/1:1,26:27:72.24:1008,72,0	0/0:32,0:32:93.21:0,93,1073	0/0:28,0:28:81.14:0,81,914	1/1:1,22:23:66.22:924,66,0	1/1:1,27:28:72.24:1003,72,0	1/1:3,58:61:99:2265,163,0	1/1:1,23:24:63.14:858,63,0	1/1:1,16:17:45.15:630,45,0	1/1:4,37:41:99:1512,108,0	1/1:2,21:23:66.22:915,66,0	1/1:0,41:41:99:1705,123,0	1/1:1,30:31:87.29:1218,87,0	1/1:0,15:15:42.14:582,42,0
chr10	63505329	.	C	CT	4466.43	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-15.721;DP=730;FS=0.380;HRun=3;HaplotypeScore=165.7536;InbreedingCoeff=0.9914;MQ=81.13;MQ0=0;MQRankSum=-2.071;QD=36.31;ReadPosRankSum=-2.327;VQSLOD=3.2719;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,108,1239	1/1:2,17:19:50.79:713,51,0	0/0:21,0:21:37.62:0,38,502	0/0:23,0:23:51.11:0,51,578	0/0:26,0:26:78.24:0,78,935	0/0:17,0:17:45.14:0,45,540	0/0:26,0:26:75.18:0,75,872	1/1:4,28:32:84.28:1171,84,0	0/0:19,0:19:51.06:0,51,598	0/0:23,0:23:66.20:0,66,784	0/0:20,0:20:51.14:0,51,601	0/0:27,0:27:78.24:0,78,935	0/0:24,0:24:69.19:0,69,815	0/0:31,0:31:81.23:0,81,971	0/0:28,0:28:81.21:0,81,940	0/0:23,0:23:66.20:0,66,790	1/1:2,40:42:99:1532,111,0	1/1:3,27:28:75.25:1050,75,0	0/0:24,0:24:63.19:0,63,746	0/0:24,0:24:60.16:0,60,698	0/0:45,0:45:99:0,123,1462	0/0:27,0:27:75.23:0,75,899	0/0:20,0:20:57.17:0,57,684	0/0:44,0:44:99:0,117,1376	0/0:15,0:15:33.09:0,33,386	0/0:21,0:21:60.18:0,60,720	0/0:35,0:35:93.28:0,93,1114	0/0:7,0:7:12.04:0,12,144
chr10	63505404	.	T	TTTTG	32338.95	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-4.563;DP=792;FS=1.410;HRun=0;HaplotypeScore=162.0536;InbreedingCoeff=0.8746;MQ=66.59;MQ0=0;MQRankSum=-7.487;QD=44.12;ReadPosRankSum=5.289;VQSLOD=5.3073;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:31:66.09:1107,66,0	1/1:10,0:13:12.04:210,12,0	0/0:24,0:21:36.12:0,36,566	0/0:35,0:34:63.16:0,63,972	1/1:13,0:26:48.16:806,48,0	1/1:5,26:32:78.27:1924,78,0	1/1:11,23:34:72.25:1757,72,0	1/1:32,0:44:45.15:756,45,0	1/1:9,20:30:66.23:1614,66,0	1/1:8,19:27:60.21:1463,60,0	1/1:7,16:24:48.16:1159,48,0	1/1:9,12:21:39.13:958,39,0	1/1:11,15:27:1.22:1111,1,0	1/1:19,20:39:72.25:1717,72,0	1/1:7,25:32:81.28:1971,81,0	1/1:8,15:23:54.18:1290,54,0	1/1:14,0:24:45.07:746,45,0	1/1:17,0:17:15.05:254,15,0	1/1:14,11:26:45.13:1034,45,0	1/1:11,21:34:72.25:1743,72,0	1/1:7,14:21:39.13:962,39,0	1/1:11,18:28:57.20:1377,57,0	1/1:4,18:25:57.20:1370,57,0	1/1:11,17:29:51.65:1256,52,0	1/1:11,23:35:66.23:1620,66,0	1/1:11,16:27:54.18:1258,54,0	1/1:13,30:42:87.30:2137,87,0	1/1:3,10:17:30.10:739,30,0
chr10	63506121	.	AAAAG	A	2394.88	PASS	AB=0.979;AC=30;AF=0.536;AN=56;BaseQRankSum=10.373;DP=578;FS=23.490;HRun=0;HaplotypeScore=206.4651;InbreedingCoeff=-0.2066;MQ=57.60;MQ0=3;MQRankSum=-4.101;QD=5.04;ReadPosRankSum=-3.711;VQSLOD=0.6918;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:17,18:35:23.51:158,0,24	1/1:14,0:14:37.16:220,37,0	0/0:23,0:11:2.06:0,2,30	0/1:26,0:14:8.42:8,0,148	1/1:23,9:32:22.16:698,22,0	0/1:21,0:21:47.12:47,0,406	0/0:16,0:16:30.10:0,30,401	1/1:26,0:26:28:154,28,0	1/1:11,0:11:16.86:94,17,0	0/1:20,0:20:12.37:12,0,458	0/1:18,0:18:37.61:38,0,325	0/1:16,0:16:23.32:23,0,268	0/1:10,0:10:11.77:12,0,126	0/1:20,0:20:75.22:75,0,454	0/1:16,0:16:40.47:40,0,299	0/1:16,0:16:34.87:35,0,310	1/1:22,1:23:31.07:194,31,0	1/1:28,0:27:26.05:230,26,0	0/0:37,0:36:3.56:0,4,716	0/1:30,0:30:79.75:80,0,461	0/0:10,0:10:21:0,21,287	0/1:13,0:13:28.90:29,0,71	0/1:22,0:22:38.32:38,0,162	0/0:16,0:16:5.60:0,6,185	0/1:18,0:18:59.69:60,0,238	0/1:19,0:19:27.81:143,0,28	0/1:36,0:36:74.55:75,0,439	1/1:5,0:5:12:106,12,0
chr10	63506122	.	AAAG	A	2657.56	PASS	AB=1.000;AC=12;AF=0.214;AN=56;BaseQRankSum=-0.324;DP=573;FS=0.428;HRun=0;HaplotypeScore=196.7343;InbreedingCoeff=0.7412;MQ=57.44;MQ0=3;MQRankSum=0.753;QD=16.51;ReadPosRankSum=1.103;VQSLOD=3.3716;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:35,0:35:53.19:53,0,176	1/1:1,13:14:42.12:609,42,0	0/0:23,0:11:19.71:0,20,136	0/0:29,0:15:30.52:0,31,367	0/1:32,0:32:84.33:299,0,84	0/0:21,0:21:26.91:0,27,674	0/0:14,0:14:39.05:0,39,580	1/1:5,20:25:53.54:654,54,0	0/0:11,0:11:24.86:0,25,171	0/0:20,0:20:53.56:0,54,803	0/0:18,0:18:49.55:0,50,674	0/0:16,0:16:42.17:0,42,562	0/0:10,0:10:21.58:0,22,264	0/0:20,0:20:52.68:0,53,773	0/0:16,0:16:43.33:0,43,599	0/0:16,0:16:43.96:0,44,606	1/1:4,19:23:38.97:498,39,0	1/1:6,21:26:38.10:708,38,0	0/0:36,0:35:93.03:0,93,1215	0/0:30,0:30:29.43:0,29,764	0/0:10,0:10:29.99:0,30,448	0/0:13,0:13:7.81:0,8,259	0/0:22,0:22:41.83:0,42,606	0/0:17,0:17:38.40:0,38,478	0/0:17,0:17:36.10:0,36,490	0/0:18,0:18:27.82:0,28,236	0/0:34,0:34:57.48:0,57,750	1/1:5,0:5:4.61:12,5,0
chr10	63506133	.	GAAAGAAA	G	1656.99	PASS	AB=0.875;AC=8;AF=0.143;AN=56;BaseQRankSum=8.270;DP=568;FS=26.198;HRun=0;HaplotypeScore=240.4380;InbreedingCoeff=0.3306;MQ=56.76;MQ0=9;MQRankSum=-6.536;QD=11.59;ReadPosRankSum=0.931;VQSLOD=1.1745;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:35,0:35:78.27:78,0,330	0/0:14,0:14:39.11:0,39,597	0/1:40,0:15:37.25:37,0,216	0/0:38,0:14:23.56:0,24,543	0/1:35,0:35:86.53:87,0,1012	0/0:17,0:17:16.90:0,17,1076	0/0:11,0:11:33.10:0,33,979	0/0:24,0:24:63.15:0,63,1128	1/1:3,5:8:24.05:469,24,0	0/0:18,0:18:30.94:0,31,1255	0/0:15,0:15:16.39:0,16,899	0/0:13,0:13:20.90:0,21,818	0/0:13,0:13:25.03:0,25,499	0/0:20,0:20:12.07:0,12,1144	0/0:14,0:14:13.95:0,14,861	0/0:14,0:14:16.22:0,16,915	0/0:25,0:24:48.15:0,48,819	0/0:27,0:26:65.03:0,65,1162	0/0:30,0:29:63.48:0,63,2114	0/0:25,0:25:7.85:0,8,1166	0/0:10,0:10:9.21:0,9,726	0/0:12,0:12:26.83:0,27,327	0/0:19,0:19:45.21:0,45,652	0/0:16,0:16:34.83:0,35,706	0/0:13,0:13:1.13:0,1,639	0/1:3,15:18:99:824,0,107	0/0:36,0:36:11.26:0,11,1312	1/1:0,5:5:12.04:306,12,0
chr10	63506140	.	A	AG	1227.94	PASS	AB=0.967;AC=10;AF=0.179;AN=56;BaseQRankSum=1.257;DP=582;FS=10.472;HRun=1;HaplotypeScore=211.6415;InbreedingCoeff=0.6632;MQ=48.28;MQ0=12;MQRankSum=-3.674;QD=10.87;ReadPosRankSum=-1.576;VQSLOD=0.2622;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:26,8:34:5.46:309,5,0	0/1:13,1:14:27.32:27,0,225	0/0:45,0:11:12.55:0,13,139	0/0:49,0:12:25.95:0,26,290	1/1:11,27:38:14.69:694,15,0	0/0:17,0:17:50.46:0,50,516	0/0:12,0:12:35.92:0,36,387	0/0:24,0:24:15.29:0,15,440	1/1:5,0:5:15.01:136,15,0	0/0:16,0:16:44.81:0,45,499	0/0:15,0:15:44.56:0,45,434	0/0:13,0:13:35.67:0,36,357	0/0:15,0:15:35.78:0,36,300	0/0:20,0:20:59.43:0,59,597	0/0:16,0:16:44.51:0,45,426	0/0:17,0:17:47.64:0,48,474	0/0:23,0:22:54.32:0,54,550	0/0:27,0:26:49.95:0,50,603	0/0:28,0:27:39.63:0,40,733	0/0:26,0:26:59.04:0,59,568	0/0:10,0:10:11.87:0,12,222	0/0:10,0:10:29.93:0,30,253	0/0:19,0:19:54.01:0,54,437	0/0:16,0:16:21.93:0,22,229	0/0:15,0:15:44.34:0,44,400	0/1:17,0:17:21.92:143,0,22	0/0:22,0:36:59.26:0,59,542	1/1:5,0:5:4.70:72,5,0
chr10	63506141	.	GAAAGGAAAGGA	G	8367.73	PASS	AB=1.000;AC=22;AF=0.393;AN=56;BaseQRankSum=11.212;DP=585;FS=25.908;HRun=0;HaplotypeScore=276.4592;InbreedingCoeff=-0.0473;MQ=46.76;MQ0=12;MQRankSum=-6.317;QD=26.48;ReadPosRankSum=1.186;VQSLOD=2.9607;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:53.21:0,53,1428	0/0:14,0:14:38.39:0,38,453	0/0:45,0:10:12.36:0,12,339	0/0:50,0:12:27.03:0,27,366	0/0:38,0:38:99:0,108,2729	0/1:18,0:18:99:408,0,240	0/1:13,0:13:91.60:92,0,160	0/0:24,0:24:60.18:0,60,1086	0/0:5,0:5:13.72:0,14,86	0/1:16,0:16:99:178,0,216	0/1:17,0:17:99:421,0,127	0/1:12,0:12:99:297,0,152	1/1:13,2:15:36.12:830,36,0	0/1:21,0:21:99:544,0,264	0/1:15,0:15:99:414,0,178	0/1:17,0:17:99:429,0,142	0/0:23,0:22:57.03:0,57,820	0/0:26,0:26:47.13:0,47,1003	0/1:28,0:27:99:297,0,330	0/1:28,0:28:99:661,0,291	0/0:9,0:9:10.13:0,10,164	1/1:4,6:10:30.06:729,30,0	1/1:9,10:19:54.18:1322,54,0	1/1:11,3:14:30.10:635,30,0	0/1:16,0:16:99:572,0,103	0/1:16,0:16:5.92:6,0,39	0/1:36,0:36:99:468,0,164	0/1:5,0:5:36.22:65,0,36
chr10	63506150	.	GGAAAA	G	6102.90	PASS	AB=0.994;AC=46;AF=0.821;AN=56;BaseQRankSum=-0.907;DP=570;FS=12.134;HRun=0;HaplotypeScore=234.9674;InbreedingCoeff=0.1630;MQ=50.01;MQ0=16;MQRankSum=-3.375;QD=13.18;ReadPosRankSum=3.553;VQSLOD=3.0123;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:38,0:38:99:103,0,175	0/1:13,0:13:66.96:195,0,67	0/0:42,0:10:14.06:0,14,276	0/0:64,0:20:37.48:0,37,280	0/1:39,0:39:87.36:87,0,515	1/1:10,5:16:33.12:355,33,0	1/1:9,0:12:8.33:161,8,0	0/1:24,0:25:63.24:63,0,288	1/1:5,0:5:9.62:44,10,0	1/1:9,3:15:35.76:336,36,0	1/1:7,5:17:14.06:304,14,0	1/1:6,3:12:8.97:204,9,0	1/1:7,0:14:11.20:174,11,0	1/1:11,7:20:45.76:489,46,0	1/1:6,4:14:9.51:253,10,0	1/1:7,4:15:25.51:295,26,0	0/1:25,0:24:99:260,0,169	0/1:27,0:26:99:299,0,183	1/1:19,3:23:44.59:396,45,0	1/1:2,19:25:31:381,31,0	1/1:8,0:9:0.43:74,0,0	1/1:8,0:9:26.80:235,27,0	1/1:16,0:17:47.62:417,48,0	1/1:14,0:15:8.86:190,9,0	1/1:6,5:15:36:354,36,0	1/1:9,0:9:5.96:45,6,0	1/1:20,8:28:29.54:353,30,0	1/1:4,0:4:3.01:35,3,0
chr10	63506155	.	AGAAAG	A	4856.01	PASS	AB=1.000;AC=39;AF=0.722;AN=54;BaseQRankSum=5.830;DP=572;FS=16.080;HRun=0;HaplotypeScore=249.4220;InbreedingCoeff=0.6370;MQ=50.50;MQ0=16;MQRankSum=-2.398;QD=13.34;ReadPosRankSum=4.128;VQSLOD=2.7152;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:37.12:0,37,323	1/1:7,5:12:24.07:407,24,0	0/0:44,0:11:11.19:0,11,261	0/0:63,0:19:6.34:0,6,182	0/0:46,0:46:32:0,32,740	1/1:16,0:15:19.23:185,19,0	0/1:13,0:13:0.03:19,0,0	1/1:24,0:24:21.06:349,21,0	0/0:10,0:10:14.33:0,14,73	1/1:18,0:18:7.78:121,8,0	1/1:18,0:18:9.85:146,10,0	0/1:14,0:14:5.44:96,0,5	1/1:13,0:13:3.33:178,3,0	1/1:22,0:22:28.09:272,28,0	1/1:13,0:13:12.65:153,13,0	1/1:16,0:16:19.27:165,19,0	1/1:18,8:25:37.01:624,37,0	1/1:19,9:27:29.26:714,29,0	1/1:19,0:18:13.75:121,14,0	1/1:27,0:27:19.17:256,19,0	0/0:9,0:9:2.50:0,2,9	1/1:10,0:10:14.70:198,15,0	1/1:19,0:19:22.23:322,22,0	0/1:14,0:14:6.18:59,0,6	1/1:15,0:15:12.42:193,12,0	./.	1/1:26,0:26:20.77:244,21,0	1/1:1,0:1:3.01:35,3,0
chr10	63506159	.	AG	A	1999.19	PASS	AB=0.824;AC=25;AF=0.463;AN=54;BaseQRankSum=12.255;DP=579;FS=3.420;HRun=2;HaplotypeScore=224.8458;InbreedingCoeff=-0.1818;MQ=50.41;MQ0=15;MQRankSum=-8.395;QD=6.60;ReadPosRankSum=4.960;VQSLOD=1.0656;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:34:69.17:0,69,953	0/1:12,0:12:14.98:15,0,132	0/0:46,0:11:22.11:0,22,248	0/0:71,0:21:35.56:0,36,410	0/0:49,0:49:99:0,144,2022	0/1:14,2:15:50.16:65,0,50	0/1:7,4:12:64.46:64,0,75	0/0:23,0:24:11.23:0,11,432	1/1:5,5:10:12.58:188,13,0	0/1:9,7:17:90.27:176,0,90	0/1:11,7:18:9.47:177,0,9	0/1:8,6:14:10.64:147,0,11	1/1:4,9:13:14.77:220,15,0	0/1:15,5:21:37.21:79,0,37	1/1:10,4:14:3.89:108,4,0	0/1:10,5:16:60.29:122,0,60	0/0:23,1:24:0.66:0,1,353	0/0:26,0:25:8.84:0,9,367	0/1:15,3:17:72.45:72,0,110	1/1:19,8:27:6.57:245,7,0	0/1:9,1:10:13.89:14,0,48	0/1:8,2:10:49.77:54,0,50	0/1:16,4:20:78.81:167,0,79	0/1:10,2:12:18.64:50,0,19	0/1:10,6:16:1.91:168,0,2	./.	0/1:26,0:26:19.42:25,0,19	1/1:1,0:1:2.22:7,2,0
chr10	63506164	.	AG	A	2716.66	PASS	AB=1.000;AC=39;AF=0.696;AN=56;BaseQRankSum=11.521;DP=518;FS=8.395;HRun=2;HaplotypeScore=212.1990;InbreedingCoeff=0.8523;MQ=52.50;MQ0=15;MQRankSum=-7.597;QD=12.07;ReadPosRankSum=4.552;VQSLOD=2.2520;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:81.23:0,81,1122	0/0:11,0:11:14.56:0,15,160	0/0:48,1:15:25.16:0,25,334	0/0:68,1:18:31.72:0,32,424	0/0:51,0:51:99:0,150,2145	1/1:6,3:8:21.33:118,21,0	1/1:0,9:9:15:148,15,0	0/0:22,0:23:47.67:0,48,468	0/1:6,0:6:10.99:11,0,14	1/1:3,9:12:31.12:249,31,0	1/1:5,9:14:29.64:231,30,0	1/1:4,6:10:26.99:206,27,0	1/1:4,9:13:32.33:249,32,0	1/1:8,6:14:24.38:154,24,0	1/1:4,8:12:27.26:172,27,0	1/1:5,5:10:27.01:203,27,0	0/0:22,1:23:18.69:0,19,288	0/0:28,0:27:46.01:0,46,456	1/1:4,3:6:16.13:112,16,0	1/1:16,8:24:41.65:290,42,0	1/1:0,3:3:5.97:45,6,0	1/1:8,2:10:16.47:96,16,0	1/1:13,5:18:21.52:257,22,0	1/1:6,2:8:11.35:75,11,0	1/1:5,10:15:32.71:230,33,0	1/1:8,0:8:7.64:17,8,0	1/1:22,0:22:16.60:53,17,0	1/1:1,0:1:2.22:7,2,0
chr10	63506166	.	GAAAGGAAAGGAAAGGAAAGA	G	16358.49	PASS	AB=1.000;AC=39;AF=0.696;AN=56;BaseQRankSum=9.886;DP=515;FS=7.164;HRun=0;HaplotypeScore=312.2244;InbreedingCoeff=0.9152;MQ=52.97;MQ0=15;MQRankSum=-9.099;QD=73.03;ReadPosRankSum=2.875;VQSLOD=3.5392;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:87.23:0,87,3579	0/0:11,0:11:33.09:0,33,1139	0/0:47,0:16:35.01:0,35,1021	0/0:70,0:19:49.88:0,50,1075	0/0:51,0:51:99:0,151,6644	1/1:4,5:8:21.96:971,22,0	1/1:9,0:9:12.88:298,13,0	0/0:22,0:22:57.19:0,57,1469	1/1:6,0:6:15.62:94,16,0	1/1:9,3:12:31.11:785,31,0	1/1:9,5:14:36.99:1134,37,0	1/1:7,3:10:27.08:835,27,0	1/1:11,0:11:33.10:1043,33,0	1/1:9,7:16:34.92:1335,35,0	1/1:8,4:12:25.02:1023,25,0	1/1:6,4:10:27.56:1074,28,0	0/0:24,0:24:63.17:0,63,1641	0/0:28,0:27:75.24:0,75,2307	1/1:5,3:7:18.06:736,18,0	1/1:10,7:17:45.14:1599,45,0	1/1:7,0:7:6.13:34,6,0	1/1:8,0:9:27.09:1005,27,0	1/1:15,0:15:45.11:1556,45,0	1/1:7,0:7:13.80:346,14,0	1/1:15,5:20:40:1279,40,0	0/1:9,0:9:0.03:0,0,0	1/1:14,8:22:21.49:1062,21,0	1/1:1,0:1:3.01:152,3,0
chr10	63506169	.	AG	A	184.22	PASS	AB=0.882;AC=6;AF=0.107;AN=56;BaseQRankSum=10.113;DP=516;FS=0.513;HRun=2;HaplotypeScore=224.1870;InbreedingCoeff=0.0855;MQ=52.22;MQ0=15;MQRankSum=-6.380;QD=3.23;ReadPosRankSum=6.854;VQSLOD=-0.1106;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:93.19:0,93,1276	0/0:11,0:11:15.90:0,16,171	0/0:42,1:15:26.02:0,26,366	0/0:66,1:18:41.06:0,41,446	0/0:52,0:52:99:0,150,2100	0/1:9,0:8:7.67:8,0,21	0/0:10,0:10:11.44:0,11,62	0/0:21,0:21:47.33:0,47,529	0/0:6,0:6:17.97:0,18,214	0/0:12,0:12:11.42:0,11,101	0/0:14,0:14:12.24:0,12,108	0/0:10,0:10:12.18:0,12,105	0/0:11,0:11:30.10:0,30,134	0/0:18,0:18:0.55:0,1,101	0/0:12,0:12:3.79:0,4,64	0/0:12,0:12:10.97:0,11,116	0/0:23,1:24:1.56:0,2,254	0/0:27,0:26:42.72:0,43,451	0/0:8,0:7:1.93:0,2,77	0/1:15,0:15:1.23:1,0,63	0/0:7,0:7:11.72:0,12,116	0/0:10,0:10:22.08:0,22,100	0/0:17,0:17:36.38:0,36,186	0/0:8,0:8:16.53:0,17,104	0/0:21,0:21:16.43:0,16,206	0/1:1,8:9:14.62:247,0,15	0/1:23,0:23:10.22:20,0,10	1/1:1,0:1:2.50:9,2,0
chr10	63506176	.	GAAAGGAAAGA	G	11814.53	PASS	AB=1.000;AC=39;AF=0.696;AN=56;BaseQRankSum=8.509;DP=527;FS=7.779;HRun=0;HaplotypeScore=261.6395;InbreedingCoeff=0.8838;MQ=53.18;MQ0=10;MQRankSum=-7.598;QD=45.44;ReadPosRankSum=2.969;VQSLOD=3.4768;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,105,1797	0/0:11,0:11:32.74:0,33,397	0/0:40,0:16:35.05:0,35,739	0/0:57,0:18:51.19:0,51,671	0/0:50,0:50:99:0,144,2947	1/1:10,0:9:27.08:621,27,0	1/1:11,0:11:21.03:253,21,0	0/0:20,0:20:57.14:0,57,829	0/1:7,0:7:10.59:11,0,68	1/1:15,0:15:41.91:673,42,0	1/1:17,0:17:47.88:785,48,0	1/1:11,0:11:32.95:567,33,0	1/1:12,2:14:41.79:786,42,0	1/1:18,0:18:48.02:912,48,0	1/1:12,0:12:30.10:650,30,0	1/1:14,0:14:42.08:736,42,0	0/0:25,0:25:54.09:0,54,679	0/0:25,0:24:68.47:0,68,838	1/1:11,0:11:33.03:538,33,0	1/1:15,0:15:44.88:925,45,0	1/1:12,0:12:35.74:287,36,0	1/1:5,6:11:8.68:654,9,0	1/1:8,10:18:53.88:1137,54,0	1/1:5,3:8:20.73:282,21,0	1/1:23,0:23:59.62:971,60,0	1/1:9,0:9:24.04:300,24,0	1/1:23,0:23:24.94:636,25,0	1/1:1,0:1:3.01:89,3,0
chr10	63506633	.	TGC	T	325.41	PASS	AC=4;AF=0.074;AN=54;BaseQRankSum=2.902;DP=539;FS=1.813;HRun=0;HaplotypeScore=169.7930;InbreedingCoeff=0.7961;MQ=45.87;MQ0=10;MQRankSum=-3.714;QD=14.15;ReadPosRankSum=-1.265;VQSLOD=3.4208;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:60.61:0,61,337	0/0:12,0:12:12.78:0,13,279	0/0:12,0:6:7.81:0,8,60	./.	0/0:13,0:12:7.52:0,8,87	0/0:19,0:19:27.29:0,27,224	0/0:22,0:22:27.67:0,28,221	0/0:25,0:25:71.91:0,72,667	0/0:20,0:20:20.99:0,21,145	0/0:24,0:24:55.48:0,55,479	0/0:12,0:12:11.73:0,12,86	0/0:21,0:21:28.57:0,29,186	0/0:23,0:22:37.60:0,38,264	0/0:29,0:29:46.72:0,47,328	0/0:22,0:22:35.86:0,36,261	0/0:20,0:20:28.76:0,29,197	0/0:32,0:32:49.91:0,50,718	0/0:22,0:20:48.18:0,48,454	0/0:16,0:16:42.09:0,42,297	0/0:18,0:18:28.33:0,28,223	0/0:20,0:20:23.96:0,24,220	0/0:14,0:14:25.55:0,26,239	0/0:12,0:11:5.99:0,6,49	0/0:18,0:17:5.41:0,5,49	0/0:18,0:18:22.63:0,23,160	1/1:9,8:17:30.89:308,31,0	0/0:15,0:15:21.44:0,21,114	1/1:4,2:5:14.98:135,15,0
chr10	63506634	.	GCACA	G	2119.41	PASS	AB=0.997;AC=30;AF=0.625;AN=48;BaseQRankSum=5.916;DP=559;FS=4.113;HRun=0;HaplotypeScore=181.6133;InbreedingCoeff=-0.0442;MQ=45.32;MQ0=10;MQRankSum=-2.545;QD=4.83;ReadPosRankSum=0.127;VQSLOD=2.4270;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:16,25:43:42.14:663,42,0	0/0:12,0:13:17.81:0,18,225	./.	./.	1/1:4,8:12:8.19:102,8,0	0/1:19,0:19:31.89:44,0,32	0/1:24,0:24:11.03:19,0,11	0/1:27,0:27:70.53:71,0,116	1/1:20,0:20:6.01:58,6,0	0/1:26,0:27:51.94:90,0,52	./.	0/1:21,0:21:40.81:115,0,41	1/1:23,0:22:11.93:96,12,0	1/1:28,0:28:18.02:167,18,0	1/1:22,0:22:12.01:111,12,0	1/1:21,0:21:14.55:139,15,0	0/0:31,0:31:34.66:0,35,363	0/0:23,0:22:36.78:0,37,383	0/1:19,0:19:40.27:40,0,51	0/1:19,0:19:11.99:22,0,12	0/1:21,0:21:18.35:18,0,18	0/1:14,0:14:18.89:19,0,32	./.	0/1:19,0:18:0:0,0,0	0/1:19,0:19:13.18:72,0,13	1/1:17,0:17:0.86:247,1,0	0/1:17,0:17:1.95:121,0,2	1/1:6,0:5:6:58,6,0
chr10	63506660	.	ACACACACACACACTCACT	A	6441.55	PASS	AB=0.973;AC=24;AF=0.429;AN=56;BaseQRankSum=5.896;DP=634;FS=4.138;HRun=0;HaplotypeScore=261.1360;InbreedingCoeff=-0.0292;MQ=47.54;MQ0=10;MQRankSum=-0.977;QD=15.83;ReadPosRankSum=2.081;VQSLOD=3.6101;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:72.17:0,72,3455	0/0:17,0:17:36.11:0,36,1267	0/0:17,0:8:18.06:0,18,645	0/0:32,0:15:36.12:0,36,1083	0/0:12,0:11:12.19:0,12,541	0/1:20,0:20:26.16:281,0,26	0/1:24,1:25:63.62:83,0,64	0/0:29,0:29:63.15:0,63,3337	0/1:21,0:21:15.11:60,0,15	1/1:27,0:27:16.58:866,17,0	0/0:10,1:11:2.99:0,3,24	0/1:24,0:24:83.01:607,0,83	1/1:23,0:22:2.10:192,2,0	0/1:24,2:26:11.01:722,0,11	1/1:23,0:23:12.04:378,12,0	0/1:19,2:21:1.24:567,0,1	0/0:38,0:38:49.78:0,50,2121	0/0:25,0:23:39.96:0,40,2021	0/1:22,0:22:45.86:615,0,46	0/1:15,1:16:22.04:124,0,22	0/1:23,0:22:64.16:64,0,124	0/1:15,0:15:38.20:123,0,38	0/1:16,0:15:0:0,0,0	1/1:26,0:25:0.47:1,0,0	1/1:20,2:22:12.04:454,12,0	0/1:26,0:26:99:488,0,158	0/1:20,3:23:17.70:667,0,18	0/1:8,0:7:70.36:149,0,70
chr10	63506662	.	ACACACACACACTCACT	A	8724.13	PASS	AB=0.843;AC=28;AF=0.519;AN=54;BaseQRankSum=3.761;DP=631;FS=9.775;HRun=0;HaplotypeScore=239.8988;InbreedingCoeff=0.2737;MQ=48.85;MQ0=10;MQRankSum=-0.680;QD=21.54;ReadPosRankSum=2.781;VQSLOD=2.0009;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:75.16:0,75,2944	0/0:17,0:17:36.09:0,36,1114	0/0:16,0:8:18.06:0,18,578	0/0:32,0:16:39.13:0,39,1049	0/0:12,0:11:9.19:0,9,440	1/1:13,7:20:27.01:560,27,0	0/1:5,20:25:17.01:132,0,17	0/0:29,0:29:43.31:0,43,2834	0/1:21,0:21:14.94:112,0,15	1/1:1,26:27:57.59:1313,58,0	./.	0/1:12,11:23:23.06:958,0,23	1/1:24,0:23:12.85:322,13,0	0/1:7,17:24:5.98:757,0,6	1/1:3,20:23:12.04:561,12,0	1/1:5,17:22:11.11:707,11,0	0/0:37,0:37:46.80:0,47,1824	0/0:25,0:23:37.64:0,38,1781	1/1:5,16:21:19.43:790,19,0	0/1:6,10:16:21.67:160,0,22	0/1:23,0:22:49.73:132,0,50	0/1:15,0:15:15.20:195,0,15	0/1:16,0:15:0:0,0,0	1/1:26,0:25:0.47:1,0,0	1/1:4,17:21:11.96:397,12,0	0/1:26,0:26:65.02:757,0,65	1/1:4,20:24:12.01:669,12,0	0/1:8,0:7:22.88:202,0,23
chr10	63506664	.	ACACACACACTCACT	A	7999.70	PASS	AB=0.813;AC=31;AF=0.574;AN=54;BaseQRankSum=4.728;DP=628;FS=5.838;HRun=0;HaplotypeScore=229.0481;InbreedingCoeff=0.4575;MQ=49.49;MQ0=10;MQRankSum=-1.236;QD=19.90;ReadPosRankSum=3.242;VQSLOD=3.2806;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:81.19:0,81,2544	0/0:17,0:17:36.08:0,36,991	0/0:16,0:9:21.07:0,21,576	0/0:30,0:17:42.14:0,42,1035	0/0:13,0:12:12.12:0,12,411	1/1:20,0:20:10.01:403,10,0	1/1:23,0:23:5.91:120,6,0	0/0:29,0:29:71.61:0,72,2562	0/1:5,15:20:13.93:184,0,14	1/1:27,0:27:45.59:1023,46,0	./.	0/1:23,0:23:37.73:728,0,38	0/1:6,20:25:2.09:507,0,2	1/1:24,0:24:18.06:637,18,0	1/1:22,0:22:12.04:425,12,0	1/1:22,0:22:17.89:567,18,0	0/0:35,0:35:46.84:0,47,1559	0/0:25,0:23:35.60:0,36,1552	1/1:21,0:21:5.75:658,6,0	0/1:15,0:15:35.44:97,0,35	0/1:23,0:22:7.56:162,0,8	1/1:9,6:15:11.97:237,12,0	0/1:3,13:15:0:0,0,0	1/1:7,18:24:0.47:1,0,0	1/1:21,0:21:10.28:321,10,0	1/1:27,0:27:7.22:1104,7,0	1/1:24,0:24:0.11:547,0,0	0/1:8,0:7:3.64:278,0,4
chr10	63506666	.	ACACACACTCACT	A	7734.40	PASS	AB=1.000;AC=33;AF=0.611;AN=54;BaseQRankSum=3.893;DP=616;FS=5.968;HRun=0;HaplotypeScore=215.4435;InbreedingCoeff=0.5521;MQ=51.00;MQ0=10;MQRankSum=-1.446;QD=19.63;ReadPosRankSum=3.065;VQSLOD=2.7946;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:81.22:0,81,2065	0/0:16,0:17:33.08:0,33,860	0/0:14,0:8:24.08:0,24,559	0/0:31,0:18:45.15:0,45,989	0/0:12,0:11:11.66:0,12,332	1/1:20,0:20:6.37:402,6,0	0/1:23,0:23:10.85:84,0,11	0/0:29,0:29:21.28:0,21,2130	1/1:19,1:20:6.02:205,6,0	1/1:27,0:27:32.87:912,33,0	./.	0/1:23,0:23:13.54:649,0,14	1/1:26,0:25:14.85:391,15,0	1/1:22,0:22:18.06:553,18,0	1/1:21,0:21:12.04:369,12,0	1/1:21,0:21:17.88:497,18,0	0/0:35,0:35:45.71:0,46,1298	0/0:23,0:22:31.41:0,31,1318	1/1:18,0:18:5.63:626,6,0	0/1:15,0:15:7.05:87,0,7	1/1:23,0:22:6.44:191,6,0	0/1:15,0:15:1.68:160,0,2	0/1:16,0:15:0:0,0,0	1/1:24,0:23:0.47:1,0,0	1/1:21,0:21:0.69:266,1,0	1/1:11,16:27:37.33:1512,37,0	1/1:24,0:24:1.09:479,1,0	1/1:7,1:7:12.75:351,13,0
chr10	63506668	.	ACACACTCACT	A	6902.13	PASS	AB=1.000;AC=33;AF=0.611;AN=54;BaseQRankSum=4.440;DP=603;FS=2.187;HRun=0;HaplotypeScore=204.0849;InbreedingCoeff=0.6616;MQ=52.59;MQ0=9;MQRankSum=-2.148;QD=18.12;ReadPosRankSum=3.185;VQSLOD=3.6067;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:87.24:0,87,1777	0/0:17,0:17:30.09:0,30,735	0/0:15,0:9:27.09:0,27,575	0/0:31,0:19:48.16:0,48,1004	0/0:11,0:11:12.42:0,12,268	1/1:20,0:20:15.01:380,15,0	1/1:23,0:23:2.99:76,3,0	0/0:28,0:28:70.63:0,71,1883	1/1:18,0:18:6.02:158,6,0	1/1:27,0:27:40.98:833,41,0	./.	1/1:23,0:23:38.63:675,39,0	1/1:26,0:25:14.89:336,15,0	1/1:21,0:21:18.06:469,18,0	1/1:20,0:20:12.04:314,12,0	1/1:19,0:19:17.88:427,18,0	0/0:36,0:36:7.44:0,7,960	0/0:22,0:21:31.04:0,31,1091	1/1:17,0:17:42.11:642,42,0	0/1:12,0:12:13.37:72,0,13	0/1:23,0:22:5.22:151,0,5	0/1:15,0:15:8.50:132,0,9	0/1:16,0:15:0:0,0,0	0/1:21,0:20:0:0,0,0	1/1:21,0:21:9.03:235,9,0	1/1:20,7:27:34.30:1265,34,0	1/1:24,0:24:18.06:429,18,0	1/1:7,1:7:12.39:309,12,0
chr10	63506670	.	A	ACACTCACT	1979.31	PASS	AC=8;AF=0.148;AN=54;BaseQRankSum=-4.289;DP=595;FS=5.373;HRun=0;HaplotypeScore=216.0444;InbreedingCoeff=0.7622;MQ=54.62;MQ0=7;MQRankSum=-5.062;QD=17.36;ReadPosRankSum=-1.536;VQSLOD=2.5873;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:84.22:0,84,1502	1/1:9,7:18:15.05:272,15,0	0/0:17,0:11:18.03:0,18,431	0/0:28,0:19:46.94:0,47,830	0/0:11,0:11:12:0,12,240	0/0:19,0:19:21.07:0,21,340	0/0:22,0:22:3.01:0,3,39	1/1:29,0:29:55.67:727,56,0	0/0:18,0:18:6.02:0,6,112	0/0:27,0:27:36.04:0,36,563	./.	0/0:19,0:19:36.06:0,36,537	0/0:24,0:23:12.34:0,12,184	0/0:20,0:20:18.06:0,18,336	0/0:20,0:20:12.04:0,12,223	0/0:19,0:19:17.86:0,18,296	1/1:12,24:40:18.11:355,18,0	1/1:8,11:25:33.11:777,33,0	0/0:16,0:16:33.02:0,33,416	0/0:11,0:11:3.48:0,3,57	0/0:22,0:21:13.39:0,13,180	0/0:16,0:16:9.01:0,9,130	0/0:16,0:15:0:0,0,0	0/0:20,0:19:0:0,0,0	0/0:20,0:20:9.03:0,9,168	0/0:26,0:26:54.15:0,54,847	0/0:23,0:23:18.02:0,18,299	0/0:7,0:6:13.79:0,14,253
chr10	63507365	.	CT	C	9262.47	PASS	AB=1.000;AC=41;AF=0.732;AN=56;BaseQRankSum=11.723;DP=586;FS=4.833;HRun=9;HaplotypeScore=61.6237;InbreedingCoeff=0.9040;MQ=74.53;MQ0=0;MQRankSum=-0.637;QD=22.65;ReadPosRankSum=1.421;VQSLOD=5.8599;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:87.26:0,87,1004	0/0:8,0:8:18.05:0,18,208	0/0:13,0:12:24.06:0,24,257	0/1:15,0:15:7.32:7,0,84	0/0:31,2:33:47.71:0,48,788	1/1:2,15:17:35.54:400,36,0	1/1:1,21:22:57.02:522,57,0	0/0:23,0:23:63.18:0,63,719	1/1:2,17:19:51.03:467,51,0	1/1:2,21:23:60.02:549,60,0	1/1:3,13:16:36.02:329,36,0	1/1:1,14:15:42.02:384,42,0	1/1:1,16:17:45.02:412,45,0	1/1:1,19:20:54.03:494,54,0	1/1:1,19:20:47.95:439,48,0	1/1:2,18:20:51.02:467,51,0	0/0:35,2:37:74.79:0,75,1097	0/0:31,0:30:78.22:0,78,888	1/1:1,20:21:60.01:544,60,0	1/1:2,28:30:78.03:713,78,0	1/1:1,12:13:33.02:302,33,0	1/1:0,23:23:57.02:522,57,0	1/1:0,16:16:45.02:412,45,0	1/1:0,9:9:24.01:220,24,0	1/1:3,24:27:69.03:632,69,0	1/1:2,32:34:96.03:872,96,0	1/1:3,21:24:57.02:522,57,0	1/1:2,6:8:6:55,6,0
chr10	63508585	.	CT	C	1402.56	PASS	AB=0.791;AC=10;AF=0.179;AN=56;BaseQRankSum=7.248;DP=468;FS=135.286;HRun=1;HaplotypeScore=60.9409;InbreedingCoeff=-0.2369;MQ=72.91;MQ0=0;MQRankSum=-9.417;QD=7.16;ReadPosRankSum=2.945;VQSLOD=0.6438;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:54.18:0,54,861	0/1:5,3:8:97.69:107,0,98	0/0:21,0:19:54.89:0,55,821	0/0:16,0:13:36.12:0,36,558	0/1:27,7:34:99:156,0,1100	0/1:11,1:12:8.60:9,0,443	0/0:13,0:13:36.12:0,36,575	0/0:20,0:20:57.19:0,57,912	0/0:16,0:16:45.15:0,45,718	0/1:20,6:26:99:172,0,857	0/1:18,10:28:99:305,0,600	0/0:17,0:17:48.16:0,48,766	0/0:14,0:14:39.13:0,39,620	0/0:9,0:9:24.08:0,24,383	0/0:20,0:20:57.19:0,57,910	0/0:12,0:12:33.11:0,33,525	0/0:18,0:18:48.16:0,48,766	0/0:16,0:16:45.13:0,45,693	0/0:12,0:12:36.12:0,36,575	0/1:13,9:22:99:273,0,504	0/0:4,0:4:12.04:0,12,192	0/1:17,2:19:29.59:30,0,600	0/1:12,3:15:85.53:86,0,440	0/0:13,0:13:33.11:0,33,522	0/1:6,6:12:99:214,0,251	0/1:14,6:20:99:193,0,516	0/0:15,1:16:3.58:0,4,628	0/0:14,1:15:0.35:0,0,567
chr10	63508923	.	GC	G	10972.12	PASS	AC=52;AF=1.000;AN=52;DP=390;FS=0.000;HRun=4;HaplotypeScore=52.7945;InbreedingCoeff=-0.0078;MQ=49.08;MQ0=7;QD=28.65;VQSLOD=4.2204;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,24:25:63.14:733,63,0	1/1:0,1:1:3.01:36,3,0	./.	./.	1/1:0,24:24:63.19:753,63,0	1/1:0,16:16:42.13:504,42,0	1/1:1,15:15:30.09:356,30,0	1/1:1,19:20:54.16:643,54,0	1/1:0,14:14:39.12:468,39,0	1/1:3,16:17:45.14:540,45,0	1/1:1,13:14:30.09:357,30,0	1/1:3,6:7:12.04:144,12,0	1/1:1,10:11:30.09:357,30,0	1/1:1,16:15:45.14:539,45,0	1/1:0,10:10:27.08:324,27,0	1/1:0,13:13:36.11:432,36,0	1/1:0,21:20:48.15:574,48,0	1/1:2,14:15:27.08:323,27,0	1/1:2,12:13:36.11:430,36,0	1/1:0,11:10:21.06:252,21,0	1/1:0,18:18:51.16:611,51,0	1/1:0,12:12:33.10:394,33,0	1/1:0,15:15:39.12:466,39,0	1/1:0,16:16:27.08:321,27,0	1/1:2,7:8:18.06:216,18,0	1/1:1,15:15:42.13:502,42,0	1/1:1,18:19:42.13:503,42,0	1/1:1,5:6:17.92:194,18,0
chr10	63508961	.	A	AAAAC	4664.67	PASS	AB=0.945;AC=28;AF=0.519;AN=54;BaseQRankSum=7.390;DP=601;FS=33.025;HRun=0;HaplotypeScore=141.8063;InbreedingCoeff=0.1670;MQ=48.89;MQ0=33;MQRankSum=-3.282;QD=12.08;ReadPosRankSum=2.701;VQSLOD=2.8274;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:30:76.94:0,77,654	0/0:6,0:6:11.84:0,12,92	0/0:46,0:15:2.56:0,3,142	0/1:25,0:10:1.38:1,0,51	0/0:25,0:25:43.07:0,43,508	1/1:18,0:19:0.36:286,0,0	1/1:17,0:18:20.72:364,21,0	0/0:31,0:29:52.93:0,53,446	0/0:15,0:14:21.52:0,22,189	0/1:32,0:30:57.30:554,0,57	0/1:22,0:24:67.05:102,0,67	1/1:16,0:14:0.61:163,1,0	1/1:13,5:18:25.55:365,26,0	0/1:20,0:20:43.20:236,0,43	0/1:22,0:22:36.20:297,0,36	0/1:13,0:13:66.42:108,0,66	0/0:33,0:33:42.63:0,43,607	0/0:24,0:18:36.63:0,37,344	0/1:22,0:22:99:189,0,120	1/1:21,0:21:3.47:271,3,0	./.	0/1:8,2:12:0.41:276,0,0	1/1:15,2:16:22.43:280,22,0	1/1:12,2:13:17.36:148,17,0	0/1:21,0:18:99:113,0,113	1/1:21,1:27:36.28:565,36,0	0/1:27,0:26:85.26:237,0,85	1/1:4,0:7:1.26:109,1,0
chr10	63508967	.	AAC	A	2077.75	PASS	AB=0.984;AC=23;AF=0.426;AN=54;BaseQRankSum=1.158;DP=609;FS=45.173;HRun=0;HaplotypeScore=129.8518;InbreedingCoeff=0.0174;MQ=50.88;MQ0=33;MQRankSum=4.524;QD=5.66;ReadPosRankSum=-5.474;VQSLOD=-0.1357;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:30:61.54:0,62,537	0/0:6,0:6:14.89:0,15,111	0/0:48,0:17:15.83:0,16,195	0/0:25,0:10:10.78:0,11,125	0/0:23,1:24:43.03:0,43,475	1/1:18,2:20:4.44:179,4,0	0/1:20,0:19:17.93:99,0,18	0/0:30,0:28:66.52:0,67,570	1/1:16,0:15:2.31:119,2,0	1/1:28,0:28:17.39:188,17,0	1/1:24,0:24:12.30:187,12,0	0/1:13,0:13:16.46:84,0,16	0/0:18,0:18:12.96:0,13,69	0/1:20,1:20:5.15:120,0,5	0/1:22,1:21:43.73:64,0,44	0/1:15,0:15:62.57:112,0,63	0/0:32,0:32:45.17:0,45,570	0/0:23,0:18:34.08:0,34,345	0/1:22,0:22:17.74:198,0,18	0/1:25,0:24:23.57:111,0,24	./.	0/1:14,0:14:5.23:83,0,5	0/1:18,0:16:34.15:87,0,34	1/1:18,0:16:9.07:118,9,0	0/1:21,0:18:19.60:90,0,20	0/1:30,0:29:28.58:166,0,29	0/1:26,4:28:7.55:213,0,8	0/1:9,0:9:3.83:32,0,4
chr10	63508969	.	C	CAAAAAAAA	13856.88	PASS	AC=38;AF=0.704;AN=54;BaseQRankSum=5.399;DP=605;FS=16.736;HRun=20;HaplotypeScore=189.2199;InbreedingCoeff=0.9418;MQ=51.72;MQ0=33;MQRankSum=-6.212;QD=36.18;ReadPosRankSum=1.269;VQSLOD=1.5499;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:27:72.46:0,72,1059	0/0:8,0:8:21.02:0,21,252	0/0:48,0:17:9.06:0,9,296	0/0:25,0:10:17.08:0,17,144	0/0:25,0:25:50.84:0,51,805	1/1:18,1:19:51.06:919,51,0	1/1:19,1:19:56.76:974,57,0	0/0:28,0:26:61.14:0,61,644	1/1:15,0:15:27.45:197,27,0	1/1:6,21:32:72.18:1257,72,0	1/1:23,1:24:47.83:912,48,0	1/1:13,0:14:39.09:551,39,0	1/1:17,0:17:44.80:558,45,0	1/1:21,0:20:56.96:866,57,0	1/1:23,0:21:65.30:947,65,0	1/1:15,0:15:44.96:733,45,0	0/0:32,0:32:51.37:0,51,1168	0/0:23,0:18:19.94:0,20,484	1/1:21,0:21:58.17:915,58,0	1/1:24,0:23:61.70:845,62,0	./.	1/1:14,0:14:19.91:448,20,0	1/1:17,0:16:32.58:465,33,0	1/1:18,0:16:23.09:279,23,0	1/1:22,0:19:47.29:696,47,0	1/1:27,0:26:77.88:1118,78,0	1/1:31,0:28:76.90:1048,77,0	1/1:8,0:8:0.02:130,0,0
chr10	63509084	.	CCAATA	C	15876.76	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=14.170;DP=473;FS=9.693;HRun=0;HaplotypeScore=100.9095;InbreedingCoeff=0.9817;MQ=71.72;MQ0=0;MQRankSum=-7.722;QD=47.82;ReadPosRankSum=4.419;VQSLOD=4.5795;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:22:60.21:0,60,1810	0/0:9,0:9:27.09:0,27,841	0/0:13,0:13:36.12:0,36,1028	0/0:7,0:8:20.66:0,21,555	0/0:28,0:28:84.29:0,84,2566	1/1:0,23:23:51.09:998,51,0	1/1:0,12:12:24.08:510,24,0	0/0:27,0:27:75.25:0,75,2256	1/1:0,21:21:45.15:958,45,0	1/1:2,22:24:66.17:1286,66,0	1/1:0,11:11:24.08:511,24,0	1/1:0,8:8:12.04:255,12,0	1/1:0,14:14:32.68:702,33,0	1/1:1,11:12:30.10:638,30,0	1/1:0,12:12:36.12:766,36,0	1/1:0,15:15:29.72:638,30,0	0/0:20,0:19:57.20:0,57,1782	0/0:13,0:13:36.11:0,36,1029	1/1:4,20:24:60.19:1210,60,0	1/1:0,27:27:51.13:1041,51,0	1/1:1,8:9:17.69:383,18,0	1/1:1,15:16:36.12:766,36,0	1/1:1,16:17:30.10:639,30,0	1/1:0,13:13:33.58:703,34,0	1/1:0,16:16:36.12:767,36,0	1/1:2,28:29:84.22:1702,84,0	1/1:1,23:24:57.20:1214,57,0	1/1:1,3:4:9.03:192,9,0
chr10	63510152	.	AC	A	2467.83	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.389;DP=639;FS=4.374;HRun=1;HaplotypeScore=67.9962;InbreedingCoeff=0.9966;MQ=80.77;MQ0=0;MQRankSum=-2.732;QD=37.39;ReadPosRankSum=1.569;VQSLOD=4.2362;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:75.25:0,75,1176	0/0:7,0:7:21.07:0,21,335	0/0:10,0:10:23.26:0,23,395	0/0:22,0:22:57.19:0,57,855	0/0:33,0:33:96.31:0,96,1510	0/0:21,0:21:63.20:0,63,984	0/0:17,0:17:51.17:0,51,812	0/0:25,0:25:72.24:0,72,1130	1/1:0,15:15:45.15:624,45,0	0/0:32,0:32:93.32:0,93,1485	0/0:18,0:18:51.16:0,51,787	0/0:22,0:22:66.21:0,66,1028	0/0:22,0:22:66.23:0,66,1055	0/0:28,0:28:84.29:0,84,1343	0/0:28,0:28:84.25:0,84,1294	0/0:22,1:23:27.27:0,27,1011	0/0:21,0:21:63.21:0,63,1004	0/0:17,0:17:51.17:0,51,798	0/0:13,0:13:39.13:0,39,611	0/0:32,0:32:96.33:0,96,1530	0/0:24,0:24:69.21:0,69,1078	0/0:25,0:25:72.23:0,72,1127	0/0:34,0:34:99:0,102,1629	0/0:21,0:21:63.21:0,63,1007	0/0:23,0:23:69.24:0,69,1100	1/1:1,23:24:24.24:896,24,0	0/0:30,0:30:90.27:0,90,1378	1/1:0,27:27:78.26:1090,78,0
chr10	63510560	.	AAGG	A	1029.33	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.651;DP=607;FS=8.588;HRun=0;HaplotypeScore=98.9788;InbreedingCoeff=0.9954;MQ=76.23;MQ0=0;MQRankSum=-1.898;QD=42.89;ReadPosRankSum=0.532;VQSLOD=5.0961;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:87.30:0,87,2004	0/0:7,0:7:21.07:0,21,484	0/0:16,0:16:32.83:0,33,897	0/0:20,0:19:51.17:0,51,1127	0/0:28,0:28:81.22:0,81,1683	0/0:27,0:27:78.25:0,78,1745	0/0:32,0:32:90.30:0,90,2010	0/0:23,0:23:69.22:0,69,1442	1/1:1,23:24:66.23:1124,66,0	0/0:15,0:15:42.14:0,42,969	0/0:15,0:15:45.15:0,45,1031	0/0:16,0:16:39.12:0,39,855	0/0:17,0:17:48.13:0,48,1016	0/0:30,0:30:84.29:0,84,1935	0/0:24,0:24:72.23:0,72,1615	0/0:19,0:19:57.14:0,57,1263	0/0:27,0:27:81.20:0,81,1645	0/0:26,0:26:75.26:0,75,1729	0/0:19,0:19:51.18:0,51,1167	0/0:20,0:20:57.18:0,57,1224	0/0:20,0:20:57.17:0,57,1241	0/0:30,0:30:87.29:0,87,1948	0/0:16,0:16:45.15:0,45,1035	0/0:20,0:20:60.16:0,60,1320	0/0:20,0:20:51.16:0,51,1127	0/0:38,0:38:99:0,111,2429	0/0:16,0:16:48.16:0,48,1071	0/0:12,0:12:36.12:0,36,830
chr10	63511731	.	TTC	T	22103.01	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=13.226;DP=904;FS=8.395;HRun=0;HaplotypeScore=129.5519;InbreedingCoeff=1.0000;MQ=71.19;MQ0=4;MQRankSum=-5.893;QD=33.59;ReadPosRankSum=5.051;VQSLOD=6.9569;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,154,2615	0/0:18,0:18:54.18:0,54,919	0/0:27,0:27:57.06:0,57,884	0/0:22,0:22:51.17:0,51,852	0/0:32,0:32:84.27:0,84,1390	1/1:4,21:24:60.19:788,60,0	1/1:3,37:39:93.30:1221,93,0	0/0:40,0:40:87.29:0,87,1448	1/1:2,26:28:78.25:1025,78,0	1/1:6,33:39:99:1301,99,0	1/1:2,20:22:51.17:670,51,0	1/1:2,35:37:96.31:1261,96,0	1/1:3,29:32:81.26:1065,81,0	1/1:7,29:35:90.29:1182,90,0	1/1:2,42:43:99:1498,114,0	1/1:2,38:40:99:1340,102,0	0/0:36,0:36:99:0,108,1807	0/0:16,0:16:45.15:0,45,749	1/1:2,23:25:66.21:867,66,0	1/1:4,40:44:99:1577,120,0	1/1:4,26:30:78.22:1007,78,0	1/1:5,27:32:81.26:1065,81,0	1/1:3,32:35:90.29:1183,90,0	1/1:2,25:26:66.21:868,66,0	1/1:1,29:30:84.27:1104,84,0	1/1:3,37:40:99:1425,111,0	1/1:3,32:35:87.28:1143,87,0	1/1:4,13:17:39.13:513,39,0
chr10	63511914	.	A	AAAAC	14890.10	PASS	AB=1.000;AC=41;AF=0.732;AN=56;BaseQRankSum=6.478;DP=780;FS=4.612;HRun=0;HaplotypeScore=190.0985;InbreedingCoeff=0.8600;MQ=55.32;MQ0=4;MQRankSum=-4.654;QD=24.98;ReadPosRankSum=-0.458;VQSLOD=4.4665;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,20:40:46.13:1014,46,0	0/0:13,0:13:36.12:0,36,572	0/0:29,0:25:36.07:0,36,438	0/0:23,0:16:3.01:0,3,48	1/1:1,16:17:48.16:1087,48,0	1/1:28,0:28:48.15:802,48,0	1/1:24,0:24:20.56:361,21,0	0/0:36,0:36:48.15:0,48,673	0/0:33,0:33:72.18:0,72,775	1/1:35,0:34:62.68:987,63,0	1/1:23,0:23:40.88:648,41,0	1/1:31,0:31:54.18:927,54,0	1/1:32,0:32:9.88:153,10,0	1/1:23,0:22:42.14:726,42,0	1/1:40,0:40:57.20:981,57,0	1/1:51,0:50:99:1867,108,0	0/0:25,0:24:57.19:0,57,877	0/0:25,0:25:46.66:0,47,681	1/1:24,0:23:36.08:487,36,0	1/1:31,0:31:60.15:957,60,0	1/1:20,0:20:17.56:302,18,0	0/1:27,0:27:2.52:69,0,3	1/1:33,0:33:12.65:194,13,0	1/1:24,0:24:4.29:68,4,0	1/1:27,0:27:60.21:1037,60,0	1/1:36,0:36:69.23:1137,69,0	1/1:27,0:27:54.18:930,54,0	1/1:3,0:3:9.03:156,9,0
chr10	63511935	.	AAAC	A	1880.78	PASS	AB=1.000;AC=10;AF=0.179;AN=56;BaseQRankSum=-9.893;DP=804;FS=5.976;HRun=0;HaplotypeScore=204.0661;InbreedingCoeff=0.0207;MQ=57.83;MQ0=8;MQRankSum=6.559;QD=6.97;ReadPosRankSum=-7.845;VQSLOD=0.1518;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:81.27:0,81,1183	0/0:14,0:14:39.11:0,39,717	0/0:26,0:20:29.72:0,30,369	0/0:19,0:11:23.43:0,23,271	0/0:25,0:25:69.70:0,70,1017	0/0:29,0:29:48.08:0,48,503	0/0:22,0:22:24.04:0,24,235	0/0:33,0:33:72.20:0,72,1082	1/1:7,26:33:63.20:910,63,0	0/1:39,0:38:99:190,0,424	0/1:29,0:29:99:128,0,300	0/0:28,0:28:54.09:0,54,529	0/1:24,0:24:99:153,0,288	0/0:27,0:26:42.07:0,42,412	0/0:30,0:30:57.07:0,57,550	0/0:54,0:53:99:0,108,1059	0/0:26,0:25:69.20:0,69,1200	0/0:28,0:28:63.20:0,63,1115	0/1:19,0:17:8.99:9,0,157	0/1:34,0:34:99:174,0,412	0/0:23,0:23:21.02:0,21,200	0/1:29,0:29:99:114,0,436	0/0:26,0:26:9.44:0,9,523	0/1:22,0:22:99:150,0,305	0/0:36,0:36:60.10:0,60,588	0/1:41,0:41:99:202,0,497	0/0:39,0:39:54.09:0,54,533	0/0:8,0:8:9.02:0,9,88
chr10	63511938	.	C	CAAACA	27061.88	PASS	AB=0.673;AC=36;AF=0.643;AN=56;BaseQRankSum=-6.281;DP=835;FS=7.128;HRun=0;HaplotypeScore=149.9584;InbreedingCoeff=0.5395;MQ=58.96;MQ0=8;MQRankSum=-3.996;QD=41.25;ReadPosRankSum=2.224;VQSLOD=4.8039;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:39,0:40:99:432,0,399	0/0:14,0:14:42.14:0,42,844	0/0:27,0:21:50.78:0,51,827	0/0:19,0:11:23.42:0,23,284	0/1:25,0:25:99:422,0,262	1/1:2,26:29:38.43:1453,38,0	1/1:3,17:24:24.08:801,24,0	0/0:33,0:33:87.28:0,87,1495	0/0:30,0:31:72.18:0,72,814	1/1:3,34:41:99:2460,107,0	1/1:0,26:29:72.20:1630,72,0	1/1:2,23:28:57.20:1775,57,0	0/1:1,0:25:13.97:212,0,14	1/1:0,25:27:42.14:1330,42,0	1/1:2,29:33:60.21:1895,60,0	1/1:1,51:53:99:3422,109,0	0/0:28,0:27:78.26:0,78,1474	0/0:27,0:27:71.22:0,71,1205	1/1:10,9:21:36.30:1082,36,0	1/1:1,33:39:99:2312,102,0	1/1:3,18:25:14.08:477,14,0	0/1:1,0:28:10.69:220,0,11	0/1:2,0:27:28.97:142,0,29	0/1:2,0:21:8.16:218,0,8	1/1:3,34:39:63.22:1940,63,0	1/1:5,37:44:99:2848,120,0	1/1:1,38:43:54.08:1705,54,0	1/1:0,10:10:9.03:285,9,0
chr10	63514026	.	GGTGTGTGTGT	G	1313.42	PASS	AB=0.906;AC=25;AF=0.543;AN=46;BaseQRankSum=4.667;DP=600;FS=11.271;HRun=0;HaplotypeScore=166.6695;InbreedingCoeff=0.3948;MQ=59.54;MQ0=19;MQRankSum=-4.174;QD=3.96;ReadPosRankSum=1.530;VQSLOD=2.1900;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:36,0:41:3.48:69,3,0	0/0:11,0:11:3:0,3,25	./.	./.	./.	1/1:17,5:22:3.48:89,3,0	1/1:18,4:22:3.01:88,3,0	0/0:31,0:31:4.99:0,5,25	0/0:12,0:15:11.05:0,11,170	0/0:20,0:20:0.89:0,1,2	1/1:9,2:11:2.97:20,3,0	1/1:17,1:18:3.01:70,3,0	0/0:14,0:14:21.07:0,21,854	1/1:20,1:21:3.01:88,3,0	1/1:20,1:21:9.02:184,9,0	1/1:19,3:23:9.50:247,10,0	0/1:15,0:21:21.16:21,0,53	0/1:15,1:16:69.96:70,0,243	./.	1/1:10,6:16:11.99:227,12,0	0/1:62,0:61:17.55:20,0,18	0/0:13,0:15:12.04:0,12,374	0/0:15,0:15:18.06:0,18,657	0/0:26,0:25:27.08:0,27,922	1/1:14,6:19:3.01:71,3,0	0/0:23,0:23:6.02:0,6,220	1/1:12,0:16:7:206,7,0	./.
chr10	63514638	.	A	AAC	5076.98	PASS	AB=0.968;AC=22;AF=0.393;AN=56;BaseQRankSum=5.891;DP=615;FS=5.409;HRun=0;HaplotypeScore=161.7102;InbreedingCoeff=-0.3953;MQ=50.62;MQ0=10;MQRankSum=-1.617;QD=11.75;ReadPosRankSum=7.076;VQSLOD=4.1690;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:80.56:0,81,670	0/0:7,0:7:17.87:0,18,144	0/0:36,0:11:23.15:0,23,214	0/0:24,0:11:18.34:0,18,157	0/0:22,0:21:34.16:0,34,240	0/1:27,0:27:99:267,0,161	0/1:19,0:19:49.87:312,0,50	0/0:24,0:22:50.84:0,51,442	0/1:15,0:14:60.96:133,0,61	0/1:32,1:33:85.60:533,0,86	0/1:37,2:39:79.28:491,0,79	0/1:16,1:17:38.18:240,0,38	0/1:23,0:23:96.57:171,0,97	0/1:5,10:16:35.66:109,0,36	0/1:24,0:24:15.87:432,0,16	0/1:11,0:11:46.22:156,0,46	0/0:16,0:16:35.11:0,35,268	0/0:19,0:19:53.74:0,54,426	0/1:22,0:21:44.97:338,0,45	0/1:30,0:29:59.49:405,0,59	1/1:8,1:9:5.49:124,5,0	0/1:18,0:17:92.58:123,0,93	1/1:16,0:16:0.03:118,0,0	0/1:19,0:19:5.37:219,0,5	0/1:28,0:27:99:365,0,116	0/1:32,0:32:99:157,0,284	0/1:25,1:24:37.51:332,0,38	0/1:8,0:8:50.90:51,0,61
chr10	63514639	.	A	AC	4169.24	PASS	AB=0.844;AC=20;AF=0.357;AN=56;BaseQRankSum=7.215;DP=613;FS=4.702;HRun=0;HaplotypeScore=145.2851;InbreedingCoeff=-0.4749;MQ=52.41;MQ0=11;MQRankSum=-1.718;QD=9.81;ReadPosRankSum=7.345;VQSLOD=3.0340;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:89.71:0,90,733	0/0:7,0:7:20.92:0,21,173	0/0:40,0:12:23.31:0,23,200	0/0:26,0:13:15.43:0,15,143	0/0:21,0:20:46.85:0,47,321	0/1:19,6:28:99:217,0,187	0/1:12,5:19:59.42:226,0,59	0/0:25,0:23:52.95:0,53,451	0/1:14,0:13:62.60:132,0,63	0/1:28,6:34:99:444,0,102	0/1:27,9:40:97.62:414,0,98	0/1:12,4:17:43.30:198,0,43	0/1:22,1:23:99:116,0,152	0/1:13,2:15:36.97:101,0,37	0/1:12,10:24:32.62:365,0,33	0/1:8,2:11:55.50:127,0,55	0/0:16,0:16:38.74:0,39,300	0/0:19,0:19:53.66:0,54,439	0/1:14,5:19:46.98:235,0,47	0/1:19,10:28:69.68:332,0,70	0/1:8,2:10:2.35:102,0,2	0/1:16,0:15:99:122,0,101	0/1:15,0:15:2.77:117,0,3	0/1:14,0:17:13.40:164,0,13	0/1:18,6:26:99:280,0,119	0/1:32,0:32:99:155,0,312	0/1:18,4:23:51.73:274,0,52	0/1:9,0:9:48.07:48,0,67
chr10	63514644	.	A	AG	1720.91	PASS	AB=0.977;AC=19;AF=0.339;AN=56;BaseQRankSum=-1.945;DP=602;FS=4.524;HRun=0;HaplotypeScore=147.5122;InbreedingCoeff=-0.4452;MQ=49.87;MQ0=11;MQRankSum=-5.502;QD=4.40;ReadPosRankSum=4.722;VQSLOD=3.1681;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:86.73:0,87,707	0/0:6,0:6:17.94:0,18,149	0/0:40,0:11:16.76:0,17,193	0/0:29,0:14:24.49:0,24,220	0/0:24,0:23:66.57:0,67,526	0/1:27,0:28:42.83:210,0,43	0/1:17,0:17:50.68:88,0,51	0/0:25,0:23:54.34:0,54,457	0/1:15,0:14:72.53:73,0,94	0/1:20,14:34:99:161,0,135	0/1:38,0:38:99:152,0,120	0/1:18,0:18:54.58:55,0,66	0/1:22,1:23:97.17:97,0,136	0/1:12,0:12:0.18:33,0,0	0/1:21,0:21:10.07:103,0,10	0/1:11,0:11:37.23:84,0,37	0/0:17,0:17:41.75:0,42,327	0/0:18,0:18:47.88:0,48,399	0/1:18,0:17:57.58:58,0,90	0/1:27,0:26:54.99:109,0,55	0/1:10,0:10:20.73:21,0,72	0/1:17,0:16:69.15:128,0,69	0/0:12,7:19:28.75:0,29,179	0/1:17,0:17:20.44:20,0,70	0/1:24,0:23:35.08:130,0,35	0/1:31,1:32:99:207,0,145	0/1:19,0:18:34.13:60,0,34	0/1:9,0:9:16.65:93,0,17
chr10	63514646	.	A	AG	244.94	PASS	AB=0.839;AC=15;AF=0.268;AN=56;BaseQRankSum=10.255;DP=595;FS=1.411;HRun=0;HaplotypeScore=152.0703;InbreedingCoeff=-0.3155;MQ=49.79;MQ0=11;MQRankSum=0.252;QD=0.83;ReadPosRankSum=0.698;VQSLOD=2.6528;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:89.66:0,90,722	0/0:6,0:6:17.93:0,18,147	0/0:39,0:11:21.52:0,22,175	0/0:29,0:14:19.96:0,20,238	0/0:24,0:23:66.51:0,67,521	0/1:24,4:28:1.08:1,0,124	0/1:12,5:17:45.56:46,0,61	0/0:25,0:23:54.33:0,54,452	0/0:13,0:12:3:0,3,94	0/1:25,6:31:71.57:122,0,72	0/1:28,9:37:5.01:5,0,169	0/1:14,3:17:0.36:0,0,99	0/0:24,0:24:38.89:0,39,264	0/1:10,2:12:10.92:11,0,31	0/1:11,10:21:39.65:54,0,40	0/1:10,2:12:14.27:14,0,41	0/0:18,0:18:44.74:0,45,348	0/0:18,0:18:47.81:0,48,390	0/1:12,5:16:41.63:42,0,45	0/1:20,7:26:41.41:41,0,75	0/1:6,2:8:0.74:1,0,50	0/0:17,0:16:5.34:0,5,100	0/0:20,0:20:4.90:0,5,54	0/1:16,0:16:2.23:2,0,43	0/1:20,4:23:13.16:13,0,123	0/0:31,0:31:20.98:0,21,242	0/1:16,4:18:23.61:24,0,61	0/1:9,0:9:4.58:5,0,38
chr10	63514648	.	A	AAAAGAAAG	9348.69	PASS	AB=0.944;AC=27;AF=0.482;AN=56;BaseQRankSum=0.105;DP=593;FS=4.650;HRun=0;HaplotypeScore=211.3497;InbreedingCoeff=0.0401;MQ=49.91;MQ0=11;MQRankSum=-6.406;QD=23.67;ReadPosRankSum=7.912;VQSLOD=3.6987;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:72.61:0,73,933	0/0:6,0:6:18.03:0,18,267	0/0:39,0:12:4.43:0,4,299	0/0:29,0:14:27.12:0,27,375	0/0:25,0:24:50.42:0,50,671	0/1:25,3:28:13.72:948,0,14	1/1:15,2:17:14.55:596,15,0	0/0:26,0:24:52.61:0,53,696	0/1:12,0:11:3.33:233,0,3	0/1:29,0:29:11.59:496,0,12	0/1:33,3:37:26.92:823,0,27	1/1:15,1:17:0.50:400,0,0	1/1:21,0:22:10.16:722,10,0	1/1:11,0:11:5.24:97,5,0	0/1:17,2:19:19.06:402,0,19	0/1:10,1:11:0.92:326,0,1	0/0:18,0:18:47.24:0,47,528	0/0:18,0:18:32.91:0,33,424	1/1:16,1:16:26.54:461,27,0	0/1:26,0:27:42.34:501,0,42	0/1:8,0:8:5.66:136,0,6	1/1:16,0:15:8.61:450,9,0	0/1:21,0:21:59.44:201,0,59	0/1:13,0:16:11.13:439,0,11	1/1:23,2:25:2.34:665,2,0	0/1:31,0:31:39.04:746,0,39	0/1:17,2:18:25.53:488,0,26	0/1:9,0:9:68.49:219,0,68
chr10	63514788	.	TAC	T	175.89	PASS	AB=0.971;AC=21;AF=0.457;AN=46;BaseQRankSum=1.252;DP=467;FS=5.646;HRun=0;HaplotypeScore=128.8021;InbreedingCoeff=0.5409;MQ=58.55;MQ0=12;MQRankSum=3.025;QD=1.05;ReadPosRankSum=2.594;VQSLOD=2.1824;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:42:15.82:0,16,118	0/0:5,0:5:11.08:0,11,55	0/0:40,0:19:11.17:0,11,95	0/0:44,0:27:15:0,15,182	0/0:28,0:28:5.84:0,6,44	1/1:12,0:12:5.21:40,5,0	0/1:15,0:15:0:0,0,0	0/0:27,0:26:41.57:0,42,287	./.	1/1:17,0:16:0.74:5,1,0	1/1:12,1:13:11.92:88,12,0	0/1:19,0:19:1.32:1,0,7	1/1:9,0:9:0.05:1,0,0	0/1:13,0:11:0:0,0,0	1/1:13,1:13:5.91:37,6,0	0/1:5,1:6:0:0,0,0	0/0:13,0:12:4.45:0,4,74	0/0:11,0:11:6.82:0,7,32	1/1:8,0:8:4.81:52,5,0	./.	./.	1/1:15,0:15:9.43:70,9,0	0/0:19,0:19:5.64:0,6,43	0/1:15,0:15:0:0,0,0	./.	./.	1/1:10,1:11:2.10:13,2,0	0/0:6,0:6:4.44:0,4,13
chr10	63514814	.	C	CAGAGAGAGAGAGAG	5246.12	PASS	AB=0.910;AC=33;AF=0.611;AN=54;BaseQRankSum=4.414;DP=399;FS=2.679;HRun=0;HaplotypeScore=202.0661;InbreedingCoeff=0.4563;MQ=59.32;MQ0=16;MQRankSum=-4.395;QD=28.36;ReadPosRankSum=0.176;VQSLOD=4.2241;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:42:54.28:0,54,1501	0/0:8,0:8:9.03:0,9,158	0/0:39,0:20:55.43:0,55,1993	0/0:48,0:36:99:0,102,3502	0/0:25,0:25:18.46:0,18,526	1/1:11,0:11:24.20:822,24,0	1/1:8,0:8:2.30:90,2,0	0/0:32,0:30:36.19:0,36,896	1/1:2,0:2:0.89:2,1,0	1/1:8,0:7:15.05:542,15,0	1/1:12,0:12:11.50:276,12,0	0/1:3,0:17:35.74:253,0,36	1/1:6,0:6:15.04:430,15,0	1/1:12,0:10:8.98:512,9,0	1/1:13,0:12:17.71:241,18,0	1/1:6,0:6:9.94:218,10,0	0/1:18,0:17:63.98:64,0,140	0/1:10,0:10:24.86:25,0,135	1/1:8,1:10:30.10:896,30,0	1/1:7,0:7:2.37:8,2,0	./.	0/1:12,0:12:16.96:35,0,17	1/1:11,0:11:9.03:196,9,0	0/1:9,0:8:0.11:0,0,0	0/0:9,0:9:0:0,0,0	1/1:1,0:1:2.37:8,2,0	1/1:9,0:8:15.05:628,15,0	0/0:3,0:2:0.73:0,1,11
chr10	63514825	.	A	AGAGAGC	7074.46	PASS	AB=1.000;AC=35;AF=0.625;AN=56;BaseQRankSum=7.940;DP=532;FS=0.466;HRun=0;HaplotypeScore=256.9876;InbreedingCoeff=0.2666;MQ=71.01;MQ0=7;MQRankSum=-7.902;QD=17.25;ReadPosRankSum=3.789;VQSLOD=3.7081;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:31,0:29:31.40:31,0,360	1/1:0,8:8:11.83:263,12,0	0/0:39,0:27:43.36:0,43,1368	0/0:46,0:41:99:0,108,2472	0/0:11,0:11:15.39:0,15,147	1/1:17,0:17:26.47:382,26,0	1/1:22,0:22:23.78:263,24,0	1/1:12,15:31:81.16:1846,81,0	1/1:16,0:16:23.98:319,24,0	1/1:14,0:13:31.36:487,31,0	0/1:18,0:18:14.11:33,0,14	0/1:17,0:17:11.04:237,0,11	1/1:15,0:15:14.08:344,14,0	0/1:18,0:18:9.90:201,0,10	1/1:21,0:21:11.79:172,12,0	0/1:22,0:22:35.55:379,0,36	1/1:3,11:15:12.46:277,12,0	1/1:1,0:10:6.02:183,6,0	0/1:16,0:12:21.96:247,0,22	1/1:23,0:23:11.04:111,11,0	0/0:12,0:11:9.30:0,9,64	0/1:12,0:12:0:0,0,0	0/1:16,0:15:12.91:124,0,13	0/0:11,0:10:3.24:0,3,25	0/1:30,0:30:52.24:150,0,52	1/1:13,0:13:10.22:435,10,0	1/1:23,0:22:29.15:590,29,0	0/0:3,0:2:1.36:0,1,3
chr10	63514856	.	TA	T	1523.75	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=2.499;DP=565;FS=2.562;HRun=5;HaplotypeScore=86.9919;InbreedingCoeff=0.9601;MQ=92.72;MQ0=0;MQRankSum=-2.655;QD=28.22;ReadPosRankSum=2.285;VQSLOD=3.9304;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,111,1516	0/0:11,0:11:26.12:0,26,334	0/0:26,0:26:60.67:0,61,812	0/0:33,0:33:84.24:0,84,1090	0/0:19,0:19:51.17:0,51,698	0/0:14,0:14:42.10:0,42,548	0/0:19,0:19:54.08:0,54,675	0/0:27,0:27:81.27:0,81,1108	1/1:0,23:23:63.18:714,63,0	0/0:18,0:18:54.18:0,54,737	0/0:14,0:14:36.03:0,36,449	0/0:22,0:22:45.03:0,45,613	0/0:19,0:19:57.19:0,57,778	0/0:14,0:14:39.13:0,39,532	0/0:25,0:25:75.25:0,75,1025	0/0:22,0:22:66.22:0,66,895	0/0:24,0:24:42.09:0,42,536	0/0:15,0:15:30.10:0,30,410	0/0:12,0:12:36.12:0,36,492	0/0:21,0:21:60.20:0,60,819	0/0:11,0:11:27.03:0,27,330	0/0:11,0:11:30.10:0,30,410	0/0:18,0:18:42.14:0,42,573	0/0:16,0:16:43.39:0,43,577	0/0:27,0:28:75.08:0,75,998	1/1:1,27:28:43.19:877,43,0	0/0:32,0:32:96.32:0,96,1311	1/1:0,3:3:6.02:68,6,0
chr10	63515613	.	AATAT	A	20346.93	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=13.660;DP=655;FS=9.536;HRun=0;HaplotypeScore=121.2212;InbreedingCoeff=0.9920;MQ=82.50;MQ0=0;MQRankSum=-3.801;QD=42.84;ReadPosRankSum=6.152;VQSLOD=4.7850;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,111,2925	0/0:4,0:4:12.04:0,12,313	0/0:21,0:21:57.19:0,57,1391	0/0:20,0:20:48.16:0,48,1208	0/0:32,0:32:90.30:0,90,2294	1/1:2,20:22:39.13:728,39,0	1/1:3,18:21:45.11:804,45,0	0/0:26,0:26:72.25:0,72,1887	1/1:1,30:31:72.25:1333,72,0	1/1:0,22:22:66.19:1145,66,0	1/1:1,19:20:42.06:711,42,0	1/1:2,29:31:78.27:1451,78,0	1/1:3,30:33:84.29:1566,84,0	1/1:1,14:15:30.10:554,30,0	1/1:2,21:23:48.16:881,48,0	1/1:2,17:19:48.16:896,48,0	0/0:17,0:17:48.16:0,48,1280	0/0:22,0:22:63.22:0,63,1657	1/1:4,20:24:60.19:1082,60,0	1/1:3,27:30:66.18:1194,66,0	1/1:1,21:22:54.19:1004,54,0	1/1:3,25:28:66.18:1196,66,0	1/1:2,18:20:32.82:616,33,0	1/1:1,23:24:63.22:1176,63,0	1/1:1,23:24:54.19:1008,54,0	1/1:1,26:27:78.23:1379,78,0	1/1:2,30:32:72.25:1344,72,0	1/1:0,7:7:15.05:280,15,0
chr10	63517478	.	GCA	G	404.52	PASS	AB=1.000;AC=32;AF=0.762;AN=42;BaseQRankSum=1.051;DP=572;FS=2.783;HRun=0;HaplotypeScore=98.9852;InbreedingCoeff=0.3203;MQ=61.62;MQ0=22;MQRankSum=-1.596;QD=1.14;ReadPosRankSum=0.662;VQSLOD=2.0062;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:28:2.98:0,3,22	1/1:8,0:8:2.99:24,3,0	./.	0/0:41,0:19:0:0,0,0	0/0:12,0:12:3.01:0,3,40	1/1:15,0:15:9.41:44,9,0	0/0:18,0:18:0:0,0,0	./.	./.	./.	0/1:15,0:15:0:0,0,0	1/1:21,0:21:8.52:42,9,0	1/1:20,1:21:3:31,3,0	1/1:19,0:19:5.68:28,6,0	1/1:23,0:22:2.84:14,3,0	1/1:17,0:17:11.36:56,11,0	1/1:30,2:31:5.85:45,6,0	1/1:18,0:16:3.01:31,3,0	1/1:16,0:16:2.84:14,3,0	1/1:20,0:20:2.84:14,3,0	0/1:44,0:44:0:0,0,1	1/1:14,0:11:2.80:13,3,0	./.	1/1:30,4:34:8.85:76,9,0	1/1:22,0:22:2.67:14,3,0	./.	1/1:14,0:14:11.36:56,11,0	./.
chr10	63519160	.	GA	G	11418.94	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=7.551;DP=690;FS=1.115;HRun=9;HaplotypeScore=81.0010;InbreedingCoeff=0.9878;MQ=77.35;MQ0=0;MQRankSum=-1.562;QD=22.70;ReadPosRankSum=4.780;VQSLOD=5.3794;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:25:66.01:0,66,729	0/0:15,0:15:39.11:0,39,444	0/0:25,0:23:38.32:0,38,394	0/0:25,0:23:41.67:0,42,426	0/0:31,0:32:87.26:0,87,1001	1/1:6,22:28:66.03:604,66,0	1/1:4,14:18:42.01:384,42,0	0/0:27,0:28:62.99:0,63,681	1/1:2,17:20:47.05:418,47,0	1/1:6,37:43:99:1006,111,0	1/1:2,27:29:78.03:714,78,0	1/1:1,15:16:39.02:357,39,0	1/1:5,32:37:55.43:761,55,0	1/1:2,15:17:45.02:412,45,0	1/1:5,27:32:81.03:741,81,0	1/1:1,17:18:48.03:439,48,0	0/0:16,0:16:45.13:0,45,519	0/0:18,2:21:8.07:0,8,572	1/1:1,18:19:52.53:487,53,0	1/1:5,33:38:99:897,99,0	1/1:1,17:18:33.02:302,33,0	1/1:0,29:29:75.03:686,75,0	1/1:3,30:33:80.94:741,81,0	1/1:2,13:15:36.01:329,36,0	1/1:1,32:33:87.05:796,87,0	1/1:4,21:25:63.03:577,63,0	1/1:3,21:25:27.45:493,27,0	1/1:0,10:10:30.02:275,30,0
chr10	63520314	.	CT	C	5123.55	PASS	AB=0.960;AC=39;AF=0.722;AN=54;BaseQRankSum=8.153;DP=414;FS=1.541;HRun=4;HaplotypeScore=72.8845;InbreedingCoeff=0.8460;MQ=60.84;MQ0=13;MQRankSum=-0.781;QD=19.26;ReadPosRankSum=0.740;VQSLOD=4.3108;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:67.56:0,68,413	0/0:6,0:6:15.43:0,15,152	0/0:32,0:7:4.06:0,4,88	0/0:18,0:5:8.18:0,8,71	0/0:14,0:14:38.28:0,38,248	1/1:4,23:27:59.71:653,60,0	1/1:1,8:9:14.81:136,15,0	0/1:23,1:22:9.43:9,0,234	1/1:9,0:9:15.01:135,15,0	1/1:2,18:20:45.01:467,45,0	1/1:3,12:14:24.07:281,24,0	1/1:0,9:9:17.99:195,18,0	1/1:10,0:10:24:211,24,0	1/1:0,8:8:18.05:203,18,0	1/1:1,10:11:15.04:176,15,0	1/1:1,6:7:15.04:167,15,0	0/0:18,0:16:37.62:0,38,232	0/0:29,0:29:41.26:0,41,198	1/1:8,10:18:45.92:463,46,0	1/1:3,6:9:26.85:260,27,0	1/1:1,7:8:18.05:213,18,0	1/1:6,0:6:14.93:117,15,0	1/1:3,1:4:9.01:82,9,0	./.	1/1:4,9:14:29.57:275,30,0	1/1:21,1:22:62.91:538,63,0	1/1:1,15:16:27.02:300,27,0	1/1:19,0:17:27.01:242,27,0
chr10	63520317	.	TTAA	T	2705.12	PASS	AB=0.936;AC=26;AF=0.481;AN=54;BaseQRankSum=7.730;DP=432;FS=0.000;HRun=0;HaplotypeScore=97.6469;InbreedingCoeff=0.2550;MQ=60.66;MQ0=11;MQRankSum=1.076;QD=10.95;ReadPosRankSum=4.552;VQSLOD=2.8398;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:30:55.22:0,55,402	0/0:6,0:6:17.90:0,18,248	0/0:35,0:8:20.39:0,20,198	0/0:19,0:5:10.82:0,11,121	0/0:14,0:14:37.71:0,38,223	1/1:25,0:27:22.93:131,23,0	0/1:10,0:10:5.64:6,0,37	0/0:21,0:20:58.54:0,59,663	1/1:0,8:9:15.05:253,15,0	0/1:19,0:19:3.20:136,0,3	1/1:12,0:12:9.73:30,10,0	0/1:11,0:11:32.06:32,0,47	1/1:0,1:10:23.97:237,24,0	0/0:10,0:10:5.74:0,6,79	0/1:12,0:11:12.69:23,0,13	0/1:9,0:10:37.03:37,0,82	0/0:20,0:18:35.64:0,36,475	0/0:28,0:28:69.14:0,69,900	0/1:19,0:20:86.92:87,0,87	1/1:9,0:9:6.60:84,7,0	0/1:10,0:10:20.60:21,0,78	1/1:0,0:6:14.92:121,15,0	0/1:1,0:5:20:83,0,20	./.	0/1:15,0:16:76.51:95,0,77	1/1:1,20:22:63.11:998,63,0	0/1:20,0:20:41.32:41,0,87	1/1:3,16:18:27.09:480,27,0
chr10	63520318	.	TA	T	1806.15	PASS	AB=0.979;AC=42;AF=0.778;AN=54;BaseQRankSum=2.148;DP=437;FS=0.637;HRun=15;HaplotypeScore=89.8127;InbreedingCoeff=-0.1766;MQ=61.79;MQ0=11;MQRankSum=0.535;QD=4.13;ReadPosRankSum=7.132;VQSLOD=1.0616;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,1:30:35.42:113,35,0	0/1:4,1:6:14.10:14,0,42	0/1:37,0:10:0.70:1,0,57	0/1:19,0:5:2.04:2,0,40	1/1:3,0:14:20.35:59,20,0	1/1:27,0:27:39.66:206,40,0	0/1:11,0:11:15.81:22,0,16	1/1:6,13:20:32.76:189,33,0	1/1:9,0:9:10.19:32,10,0	1/1:21,0:21:9.24:76,9,0	1/1:12,0:12:20.93:87,21,0	0/1:11,0:11:14.25:32,0,14	1/1:10,0:10:20.39:79,20,0	0/1:10,0:10:10.24:60,0,10	1/1:12,0:11:3:37,3,0	0/1:10,0:10:26.70:34,0,27	1/1:7,9:17:0.40:106,0,0	1/1:7,21:28:29.82:319,30,0	0/1:19,0:19:39.32:85,0,39	1/1:9,0:9:3.37:46,3,0	0/1:11,0:11:17.54:35,0,18	1/1:6,0:6:7.73:30,8,0	0/1:5,0:5:5.23:22,0,5	./.	0/1:16,0:16:22.90:39,0,23	1/1:22,0:22:37.34:116,37,0	0/1:20,0:20:19.25:52,0,19	1/1:19,0:18:19.25:58,19,0
chr10	63520575	.	A	AG	13685.60	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=4.042;DP=514;FS=2.042;HRun=1;HaplotypeScore=70.7509;InbreedingCoeff=0.9975;MQ=81.48;MQ0=0;MQRankSum=-0.958;QD=39.55;ReadPosRankSum=3.027;VQSLOD=5.6492;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,111,1369	0/0:9,0:9:24.08:0,24,312	0/0:17,0:17:38.23:0,38,415	0/0:17,0:17:51.13:0,51,630	0/0:26,0:26:72.15:0,72,885	1/1:0,21:21:57.19:854,57,0	1/1:0,21:21:57.19:854,57,0	0/0:22,0:22:63.20:0,63,808	1/1:1,20:21:57.19:854,57,0	1/1:1,24:25:69.22:1015,69,0	1/1:1,7:8:23.91:303,24,0	1/1:0,10:9:24.01:333,24,0	1/1:0,17:17:45.13:652,45,0	1/1:1,16:17:39.08:558,39,0	1/1:0,23:22:66.22:988,66,0	1/1:1,16:17:51.12:738,51,0	0/0:23,0:23:66.19:0,66,839	0/0:15,0:15:45.15:0,45,582	1/1:1,18:19:54.18:808,54,0	1/1:0,15:15:39.13:583,39,0	1/1:2,12:14:36.05:501,36,0	1/1:1,13:14:38.91:502,39,0	1/1:0,7:7:21.07:314,21,0	1/1:1,29:30:42.17:1052,42,0	1/1:1,7:8:21.07:309,21,0	1/1:2,27:29:81.27:1208,81,0	1/1:0,19:19:51.17:764,51,0	1/1:0,11:11:33.11:494,33,0
chr10	63520661	.	A	AGTAC	8512.45	PASS	AB=1.000;AC=43;AF=0.768;AN=56;BaseQRankSum=3.896;DP=527;FS=4.636;HRun=0;HaplotypeScore=146.5324;InbreedingCoeff=0.6338;MQ=54.27;MQ0=22;MQRankSum=-1.228;QD=20.76;ReadPosRankSum=2.244;VQSLOD=4.5488;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:23:10.01:10,0,394	0/0:7,0:7:8.14:0,8,114	0/0:37,0:15:39.05:0,39,588	0/0:42,0:22:41.85:0,42,568	0/1:17,0:17:19.74:20,0,203	1/1:14,0:14:20.90:343,21,0	1/1:16,0:16:3.27:9,3,0	0/0:20,0:21:34.72:0,35,780	1/1:16,3:19:38.13:610,38,0	1/1:20,0:19:48.22:797,48,0	1/1:15,0:15:23.53:344,24,0	1/1:20,0:20:33.04:535,33,0	1/1:18,0:18:39.13:645,39,0	1/1:17,0:18:17.13:304,17,0	1/1:17,0:17:39.22:536,39,0	1/1:22,0:22:35.08:680,35,0	0/1:19,0:19:0.05:0,0,344	0/0:10,0:9:23.77:0,24,267	1/1:19,0:19:28.56:391,29,0	1/1:11,0:11:2.90:16,3,0	1/1:16,0:16:1.48:117,1,0	1/1:12,0:12:13.29:217,13,0	1/1:7,0:7:2.80:62,3,0	1/1:23,0:22:13.95:208,14,0	1/1:23,0:24:35.60:574,36,0	1/1:23,0:23:54.65:911,55,0	1/1:15,0:15:36.30:391,36,0	1/1:17,3:20:42.61:791,43,0
chr10	63520663	.	T	TACGTACACACAC	14979.88	PASS	AB=0.915;AC=42;AF=0.750;AN=56;BaseQRankSum=0.348;DP=656;FS=2.165;HRun=0;HaplotypeScore=255.4368;InbreedingCoeff=0.3618;MQ=50.96;MQ0=23;MQRankSum=-1.948;QD=27.64;ReadPosRankSum=0.212;VQSLOD=4.1934;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:34:27.98:28,0,420	0/0:9,0:9:8.76:0,9,114	0/0:38,0:15:39.05:0,39,588	0/0:42,0:21:41.74:0,42,567	0/0:11,0:25:23.78:0,24,257	1/1:18,0:18:20.62:464,21,0	1/1:24,0:24:22.25:587,22,0	0/1:21,0:21:63.96:64,0,721	0/1:17,0:18:68.03:239,0,68	1/1:21,0:19:53.77:1095,54,0	1/1:21,1:22:33.06:539,33,0	1/1:23,1:25:35.28:736,35,0	1/1:17,0:19:42.14:992,42,0	1/1:20,3:24:27.08:879,27,0	1/1:20,2:22:48.10:1335,48,0	1/1:24,3:28:54.11:1614,54,0	0/1:25,0:26:99:442,0,335	0/1:14,0:13:99:321,0,222	1/1:26,0:26:51.91:846,52,0	1/1:6,10:19:3.01:145,3,0	1/1:23,0:22:12.98:170,13,0	1/1:17,0:17:15.05:309,15,0	1/1:6,0:15:2.61:166,3,0	1/1:29,0:28:22.83:650,23,0	1/1:22,2:26:36.12:1036,36,0	1/1:24,0:26:55.74:848,56,0	1/1:16,0:18:42.60:919,43,0	0/1:15,0:20:53.70:555,0,54
chr10	63520665	.	C	CGT	6233.63	PASS	AB=0.832;AC=23;AF=0.411;AN=56;BaseQRankSum=-0.676;DP=651;FS=68.954;HRun=0;HaplotypeScore=197.3449;InbreedingCoeff=-0.1184;MQ=47.12;MQ0=24;MQRankSum=-1.051;QD=14.84;ReadPosRankSum=8.901;VQSLOD=1.5086;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:35:14.17:0,14,440	0/0:8,0:8:8.14:0,8,114	0/0:37,0:13:39.05:0,39,589	0/0:38,0:16:42.53:0,43,569	0/0:25,0:25:19.91:0,20,266	0/1:15,5:19:0.19:244,0,0	0/0:14,10:24:17.25:0,17,142	0/0:21,0:21:53.76:0,54,854	0/1:14,2:16:22.15:459,0,22	0/1:11,9:18:3.19:638,0,3	0/1:19,3:22:66.61:243,0,67	0/1:19,7:25:9.22:400,0,9	1/1:14,4:18:41.72:578,42,0	0/1:21,3:24:99:150,0,140	0/1:21,3:23:97.12:353,0,97	0/1:24,6:29:97.30:464,0,97	0/0:27,0:27:46.94:0,47,523	0/0:14,0:13:33.04:0,33,385	0/1:16,10:26:99:322,0,115	1/1:18,0:18:0.60:1,1,0	1/1:19,4:22:8.24:126,8,0	0/1:14,3:17:8.68:175,0,9	1/1:16,0:16:0.15:32,0,0	0/1:24,5:28:24.37:171,0,24	0/1:17,9:26:26.12:426,0,26	0/1:21,3:23:79.74:714,0,80	0/1:15,4:19:99:240,0,110	0/1:20,1:20:79.70:497,0,80
chr10	63521280	.	T	TCCCAGGAGAGCATGGCTAA	54701.48	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-6.400;DP=831;FS=8.317;HRun=0;HaplotypeScore=259.2046;InbreedingCoeff=0.9883;MQ=72.82;MQ0=0;MQRankSum=-16.957;QD=92.87;ReadPosRankSum=3.934;VQSLOD=3.3599;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:57:99:0,168,7329	0/0:16,0:16:42.13:0,42,1908	0/0:26,0:26:75.01:0,75,2615	0/0:22,0:22:60.03:0,60,2169	0/0:33,0:33:93.30:0,93,4353	1/1:0,0:21:30.10:2581,30,0	1/1:3,0:39:27.09:1823,27,0	0/0:29,0:29:81.16:0,81,3109	1/1:24,0:36:93.31:5775,93,0	1/1:1,0:33:92.37:4811,92,0	1/1:1,0:15:20.85:1089,21,0	1/1:1,0:27:27.09:2319,27,0	1/1:2,0:42:18.06:1552,18,0	1/1:0,0:34:27.09:2304,27,0	1/1:1,0:43:54.19:4632,54,0	1/1:0,0:23:27.09:2322,27,0	0/0:31,0:31:87.25:0,87,4186	0/0:28,0:28:84.25:0,84,3721	1/1:1,0:27:78.26:3755,78,0	1/1:0,0:22:23.99:1365,24,0	1/1:2,0:30:24.07:2064,24,0	1/1:2,0:32:34.36:2847,34,0	1/1:3,0:27:17.57:1536,18,0	1/1:2,0:25:18.06:1553,18,0	1/1:3,0:28:12.04:1032,12,0	1/1:27,0:33:96.32:6193,96,0	1/1:0,1:43:38.69:3334,39,0	1/1:6,0:9:27.09:1815,27,0
chr10	63521337	.	GCA	G	2676.14	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=10.298;DP=801;FS=0.000;HRun=0;HaplotypeScore=111.3650;InbreedingCoeff=0.9967;MQ=77.55;MQ0=2;MQRankSum=-4.227;QD=32.64;ReadPosRankSum=0.010;VQSLOD=5.5400;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:56:99:0,156,2783	0/0:7,0:7:18.06:0,18,330	0/0:16,0:17:48.16:0,48,850	0/0:34,0:34:67.60:0,68,1344	0/0:28,0:28:84.29:0,84,1529	0/0:19,0:18:33.11:0,33,598	0/0:32,0:32:78.27:0,78,1429	0/0:32,0:32:87.30:0,87,1596	1/1:4,28:31:78.26:1116,78,0	0/0:41,0:41:99:0,105,1886	0/0:17,0:17:33.11:0,33,597	0/0:28,0:28:54.19:0,54,989	0/0:45,0:45:87.30:0,87,1583	0/0:28,0:28:48.16:0,48,879	0/0:36,0:36:69.24:0,69,1264	0/0:29,0:29:72.25:0,72,1320	0/0:29,0:29:81.25:0,81,1451	0/0:24,0:24:69.24:0,69,1251	0/0:13,0:13:36.09:0,36,594	0/0:29,0:29:75.26:0,75,1364	0/0:34,0:34:81.28:0,81,1484	0/0:25,0:25:48.16:0,48,880	0/0:22,0:22:47.93:0,48,880	0/0:18,0:18:31.66:0,32,602	0/0:34,0:34:72.25:0,72,1320	1/1:6,31:36:38.41:1231,38,0	0/0:42,0:41:75.24:0,75,1373	1/1:1,12:13:33.11:471,33,0
chr10	63522444	.	CAT	C	12848.40	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=16.351;DP=473;FS=12.731;HRun=0;HaplotypeScore=137.8812;InbreedingCoeff=0.9695;MQ=91.00;MQ0=0;MQRankSum=-13.255;QD=45.24;ReadPosRankSum=4.554;VQSLOD=5.1994;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:42:99:0,129,2562	0/0:11,0:11:33.11:0,33,660	0/0:20,0:20:43.84:0,44,808	0/0:28,0:28:46.08:0,46,1132	0/0:11,0:11:33.11:0,33,659	1/1:1,16:17:51.17:812,51,0	1/1:0,17:17:48.13:779,48,0	0/0:21,0:21:63.22:0,63,1254	1/1:1,12:13:39.13:615,39,0	1/1:0,12:12:36.12:585,36,0	1/1:0,9:9:21.04:340,21,0	1/1:0,14:14:39.13:633,39,0	1/1:0,16:16:48.16:777,48,0	1/1:0,7:7:21.07:340,21,0	1/1:0,22:22:57.19:926,57,0	1/1:0,16:16:48.16:780,48,0	0/0:28,0:28:84.29:0,84,1692	0/0:27,0:27:81.28:0,81,1646	1/1:0,10:10:30.09:464,30,0	1/1:0,15:15:39.13:631,39,0	1/1:0,16:16:42.13:642,42,0	1/1:0,10:10:30.10:488,30,0	1/1:1,11:12:36.12:578,36,0	1/1:0,14:14:36.12:585,36,0	1/1:0,23:23:63.22:1023,63,0	1/1:0,13:13:39.13:634,39,0	1/1:0,25:25:72.21:1171,72,0	1/1:0,3:3:3.01:49,3,0
chr10	63522721	.	GC	G	13006.36	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=15.716;DP=555;FS=1.132;HRun=3;HaplotypeScore=93.2012;InbreedingCoeff=0.9984;MQ=64.20;MQ0=1;MQRankSum=1.739;QD=34.50;ReadPosRankSum=5.191;VQSLOD=4.9468;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:75.25:0,75,1079	0/0:10,0:10:30.06:0,30,392	0/0:26,0:24:72.06:0,72,972	0/0:20,0:18:51.14:0,51,704	0/0:25,0:25:75.25:0,75,1077	1/1:2,24:26:75.22:917,75,0	1/1:0,11:11:33.10:409,33,0	0/0:32,0:32:93.29:0,93,1290	1/1:0,14:14:39.12:483,39,0	1/1:0,25:25:75.24:929,75,0	1/1:0,22:22:66.21:813,66,0	1/1:0,16:16:42.13:521,42,0	1/1:0,24:24:72.23:892,72,0	1/1:0,19:19:51.16:632,51,0	1/1:0,27:27:75.24:930,75,0	1/1:0,15:15:39.12:483,39,0	0/0:24,0:24:69.22:0,69,971	0/0:16,0:16:48.16:0,48,691	1/1:1,13:14:36.11:446,36,0	1/1:2,23:25:72.21:875,72,0	1/1:0,15:15:39.12:483,39,0	1/1:0,15:15:39.12:474,39,0	1/1:0,10:10:30.09:366,30,0	1/1:0,19:19:51.16:623,51,0	1/1:0,18:18:42.13:520,42,0	1/1:0,34:34:99:1222,99,0	1/1:2,20:22:63.18:767,63,0	1/1:0,6:6:18.06:223,18,0
chr10	63523138	.	GA	G	6671.78	PASS	AB=0.688;AC=49;AF=0.875;AN=56;BaseQRankSum=-1.570;DP=574;FS=8.314;HRun=13;HaplotypeScore=83.7130;InbreedingCoeff=0.1728;MQ=56.87;MQ0=17;MQRankSum=1.134;QD=11.94;ReadPosRankSum=1.876;VQSLOD=4.4562;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,29:34:67.65:487,68,0	1/1:0,5:5:14.91:109,15,0	0/0:15,0:9:12.74:0,13,103	0/1:11,1:6:15.91:16,0,17	1/1:9,20:28:21.51:321,22,0	0/1:6,13:19:22.54:183,0,23	1/1:13,9:22:35.86:236,36,0	1/1:7,23:30:40.25:469,40,0	1/1:7,0:22:20.36:60,20,0	1/1:9,15:23:22.32:250,22,0	1/1:7,13:21:11.41:238,11,0	1/1:4,14:18:37.83:268,38,0	1/1:3,15:17:41.75:306,42,0	1/1:2,9:12:17.78:124,18,0	1/1:7,8:15:20.85:153,21,0	1/1:9,11:19:38.65:283,39,0	1/1:11,27:37:66.42:485,66,0	0/1:9,11:19:12.04:179,0,12	1/1:15,9:23:9.97:220,10,0	0/1:9,12:21:6.54:202,0,7	1/1:3,13:14:26.83:197,27,0	1/1:0,7:7:20.86:151,21,0	0/1:8,10:18:25.57:162,0,26	1/1:9,15:24:14.62:261,15,0	1/1:7,13:20:21.23:301,21,0	1/1:10,16:27:46.99:415,47,0	1/1:6,20:24:56.67:415,57,0	1/1:4,8:10:13.50:180,13,0
chr10	63523316	.	C	CAGAG	1625.02	PASS	AB=0.957;AC=15;AF=0.278;AN=54;BaseQRankSum=-3.792;DP=463;FS=23.449;HRun=0;HaplotypeScore=127.1736;InbreedingCoeff=0.1715;MQ=63.94;MQ0=12;MQRankSum=-0.080;QD=6.58;ReadPosRankSum=-2.397;VQSLOD=0.7004;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:4.70:0,5,26	1/1:3,3:6:8.90:152,9,0	0/0:33,0:12:2.96:0,3,19	0/1:51,0:28:0.21:0,0,0	0/1:13,0:12:0:0,0,0	0/0:15,0:15:10.28:0,10,108	0/1:16,0:16:6.20:6,0,105	1/1:30,0:30:41.85:400,42,0	0/0:12,0:12:9.02:0,9,93	0/1:14,0:14:23:23,0,63	0/0:15,0:15:5.93:0,6,69	0/0:17,0:17:23.28:0,23,270	0/1:18,0:18:4.26:4,0,37	./.	0/0:18,0:18:8.53:0,9,102	0/0:15,0:16:0.26:0,0,59	0/1:15,16:40:4.01:577,0,4	1/1:6,6:14:10.46:574,10,0	0/1:13,0:13:11.97:12,0,95	0/1:11,0:12:0.80:1,0,62	0/0:16,0:15:5.12:0,5,54	0/0:8,0:8:2.60:0,3,10	0/0:3,0:3:2.60:0,3,10	0/0:17,0:17:8.69:0,9,84	0/0:6,0:6:4.78:0,5,46	0/0:9,0:9:6.81:0,7,24	0/1:17,0:18:16.14:16,0,133	0/0:3,0:3:5.98:0,6,49
chr10	63523338	.	GAGAGAGAGACAGAGAC	G	3581.80	PASS	AB=0.985;AC=25;AF=0.446;AN=56;BaseQRankSum=4.580;DP=478;FS=44.394;HRun=0;HaplotypeScore=184.2185;InbreedingCoeff=0.0262;MQ=55.11;MQ0=21;MQRankSum=-2.971;QD=14.38;ReadPosRankSum=1.912;VQSLOD=1.4542;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:18,0:18:29.84:30,0,236	0/0:9,0:9:21.07:0,21,1103	1/1:21,0:3:0.47:1,0,0	0/0:33,0:11:6.35:0,6,49	0/0:17,0:15:0.45:0,0,1	0/1:15,0:15:45.19:45,0,122	0/0:18,0:18:14.99:0,15,208	0/0:31,0:30:40.30:0,40,897	1/1:2,11:13:12.04:492,12,0	0/1:17,0:17:62.59:230,0,63	0/0:18,0:16:5.54:0,6,115	0/1:19,0:19:67.21:148,0,67	1/1:2,16:18:21.07:883,21,0	0/0:17,0:17:2.99:0,3,23	0/1:11,0:11:46.20:46,0,79	1/1:15,0:15:14.95:131,15,0	0/0:43,0:43:57.90:0,58,3235	0/0:21,0:21:62.70:0,63,2531	0/1:12,0:11:87.11:100,0,87	0/0:22,0:22:15.99:0,16,153	0/1:11,0:9:15.95:16,0,50	1/1:0,9:9:3.01:48,3,0	1/1:5,0:4:3.01:72,3,0	1/1:10,3:13:2.26:227,2,0	0/1:7,1:8:25.69:26,0,40	0/1:18,1:17:99:708,0,137	0/1:22,0:22:99:307,0,103	0/1:3,0:2:8.96:72,0,9
chr10	63523340	.	GAGAGAGAC	G	2561.37	PASS	AB=0.976;AC=28;AF=0.500;AN=56;BaseQRankSum=7.113;DP=473;FS=45.641;HRun=0;HaplotypeScore=146.1673;InbreedingCoeff=-0.1628;MQ=55.52;MQ0=19;MQRankSum=-4.319;QD=7.95;ReadPosRankSum=1.813;VQSLOD=1.2808;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:15,3:18:20.67:218,21,0	0/0:9,0:9:21.03:0,21,501	0/0:16,0:3:2.68:0,3,11	0/0:31,0:11:0.41:0,0,1	1/1:3,15:16:2.51:17,3,0	0/1:15,0:15:80.17:80,0,100	0/0:18,0:18:12.03:0,12,160	0/1:31,0:30:81.66:82,0,191	1/1:12,0:13:12.03:184,12,0	0/1:17,0:17:10.11:275,0,10	0/0:17,0:15:5.64:0,6,78	0/1:19,0:19:67.47:243,0,67	1/1:18,0:18:20.90:315,21,0	0/0:18,0:18:2.99:0,3,23	0/1:11,0:11:78.05:78,0,80	1/1:14,0:15:12.04:175,12,0	0/0:41,0:41:71.79:0,72,1530	0/1:22,0:22:33.75:34,0,1098	0/1:12,0:11:61.12:61,0,74	0/1:22,0:22:41.35:41,0,83	0/1:11,0:9:16.73:17,0,27	1/1:9,0:9:2.65:13,3,0	1/1:5,0:4:2.80:13,3,0	0/1:13,0:13:11.71:83,0,12	0/1:8,0:8:39.82:42,0,40	0/1:20,0:18:58.90:297,0,59	0/1:20,0:22:96.01:403,0,96	0/1:2,0:2:22.17:56,0,22
chr10	63523410	.	C	CCT	166.47	PASS	AB=0.864;AC=3;AF=0.054;AN=56;BaseQRankSum=3.498;DP=435;FS=0.000;HRun=0;HaplotypeScore=98.4583;InbreedingCoeff=0.0952;MQ=72.46;MQ0=2;MQRankSum=3.169;QD=3.54;ReadPosRankSum=0.171;VQSLOD=1.9502;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:45.02:0,45,611	0/0:4,0:4:12.04:0,12,184	0/1:11,5:14:99:187,0,317	0/1:19,3:21:67.24:67,0,438	0/0:19,0:19:37.16:0,37,425	0/0:23,0:23:48.12:0,48,708	0/0:12,0:12:15.05:0,15,229	0/0:40,0:40:99:0,120,1738	0/0:6,0:6:6.02:0,6,92	0/0:19,0:19:48.14:0,48,694	0/0:15,0:14:23.76:0,24,291	0/0:13,0:13:15.04:0,15,210	0/0:11,0:11:15.05:0,15,229	0/0:13,0:13:3.01:0,3,46	0/0:6,0:6:8.99:0,9,112	0/0:11,0:11:18.06:0,18,275	0/0:40,0:40:99:0,107,1613	0/0:17,0:17:45.15:0,45,685	0/0:6,0:6:18.06:0,18,276	0/0:16,0:16:29.89:0,30,328	0/0:12,0:12:30.06:0,30,433	0/1:7,0:7:0:0,0,0	0/0:4,0:4:6.02:0,6,92	0/0:6,0:6:8.92:0,9,86	0/0:12,0:12:27.09:0,27,413	0/0:27,0:27:81.28:0,81,1238	0/0:22,0:22:57.19:0,57,871	0/0:17,0:17:45.15:0,45,689
chr10	63523529	.	CT	C	10501.21	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=4.386;DP=527;FS=3.909;HRun=9;HaplotypeScore=56.3423;InbreedingCoeff=0.9855;MQ=74.94;MQ0=0;MQRankSum=-4.558;QD=23.65;ReadPosRankSum=2.453;VQSLOD=5.8636;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,2:24:11.27:0,11,636	1/1:1,6:7:18.01:165,18,0	0/0:12,0:12:33.04:0,33,350	0/0:9,0:9:22.55:0,23,219	0/0:38,0:38:96.29:0,96,1108	1/1:2,13:15:39.01:357,39,0	1/1:2,11:13:27.01:247,27,0	1/1:2,36:38:99:983,108,0	1/1:1,17:18:45.02:412,45,0	1/1:1,20:21:60.03:548,60,0	1/1:1,19:20:54.03:494,54,0	1/1:0,12:12:36.02:329,36,0	1/1:1,12:13:32.58:302,33,0	1/1:1,9:10:24.01:220,24,0	1/1:2,14:16:39.01:357,39,0	1/1:3,18:21:54.01:494,54,0	1/1:1,18:19:48.02:439,48,0	1/1:4,13:17:36.02:329,36,0	1/1:5,22:27:66.02:601,66,0	1/1:3,18:21:48.01:439,48,0	1/1:0,12:12:36.02:329,36,0	1/1:2,13:15:39.02:357,39,0	1/1:0,13:14:38.06:335,38,0	1/1:4,14:18:39.01:357,39,0	1/1:4,16:20:45.02:412,45,0	1/1:0,27:27:80:708,80,0	1/1:3,25:28:78.03:710,78,0	1/1:0,22:22:63.03:577,63,0
chr10	63524656	.	CAAA	C	1525.81	PASS	AB=0.577;AC=10;AF=0.500;AN=20;BaseQRankSum=-7.014;DP=160;FS=0.000;HRun=15;HaplotypeScore=76.0683;InbreedingCoeff=0.4313;MQ=63.85;MQ0=11;MQRankSum=-2.586;QD=11.74;ReadPosRankSum=0.722;VQSLOD=0.8197;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:5,1:17:13.91:14,0,51	1/1:1,9:11:19.31:233,19,0	0/0:15,0:6:6.93:0,7,91	0/0:7,0:2:0:0,0,0	0/1:9,1:35:1.05:1,0,63	./.	./.	1/1:6,13:19:38.91:421,39,0	./.	0/0:1,0:1:1.25:0,1,3	./.	./.	./.	./.	./.	./.	1/1:6,19:26:52.57:603,53,0	1/1:5,12:19:30:349,30,0	./.	./.	./.	./.	./.	./.	./.	./.	0/0:1,0:1:1.55:0,2,4	./.
chr10	63525076	.	CT	C	12268.31	PASS	AB=0.944;AC=49;AF=0.875;AN=56;BaseQRankSum=9.151;DP=645;FS=2.580;HRun=9;HaplotypeScore=93.3433;InbreedingCoeff=0.8742;MQ=76.97;MQ0=2;MQRankSum=-3.699;QD=22.14;ReadPosRankSum=2.914;VQSLOD=5.4307;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,102,1154	1/1:3,13:16:33.01:302,33,0	0/0:24,0:24:32.89:0,33,402	0/1:16,1:16:5.70:6,0,223	0/0:31,0:31:84.25:0,84,962	1/1:5,14:19:36.01:330,36,0	1/1:1,16:17:45.02:412,45,0	1/1:9,26:35:78.01:708,78,0	1/1:2,27:30:80.08:720,80,0	1/1:6,20:26:60:541,60,0	1/1:1,16:17:48.02:439,48,0	1/1:2,13:15:42.02:382,42,0	1/1:2,11:13:33.01:302,33,0	1/1:4,18:22:51.02:467,51,0	1/1:2,20:22:60.03:549,60,0	1/1:3,16:19:48.02:439,48,0	1/1:3,32:34:93.05:851,93,0	1/1:1,13:14:33.02:302,33,0	1/1:6,14:20:42.01:384,42,0	1/1:4,31:35:89.57:823,90,0	1/1:0,21:21:57.03:522,57,0	1/1:2,22:23:66.04:604,66,0	1/1:2,18:20:52.58:471,53,0	1/1:0,22:22:54.03:494,54,0	1/1:1,14:15:39.01:357,39,0	1/1:9,26:35:78.03:714,78,0	1/1:1,19:20:51.03:466,51,0	1/1:0,25:25:75.04:686,75,0
chr10	63525371	.	CA	C	12231.97	PASS	AB=1.000;AC=41;AF=0.732;AN=56;BaseQRankSum=13.066;DP=694;FS=1.464;HRun=8;HaplotypeScore=84.8660;InbreedingCoeff=0.9081;MQ=69.87;MQ0=0;MQRankSum=-1.579;QD=24.13;ReadPosRankSum=2.624;VQSLOD=5.5456;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:84.25:0,84,1003	0/0:9,0:9:24.07:0,24,290	0/0:25,0:25:22.71:0,23,470	0/1:13,0:13:29.29:29,0,91	0/0:29,0:29:75.21:0,75,886	1/1:3,25:28:69.11:666,69,0	1/1:7,20:27:57.09:550,57,0	0/0:35,0:35:93.28:0,93,1114	1/1:2,21:23:63.10:608,63,0	1/1:5,22:27:66.10:637,66,0	1/1:0,11:11:30.05:289,30,0	1/1:0,25:25:75.12:724,75,0	1/1:2,22:24:57.09:550,57,0	1/1:4,18:22:48.08:464,48,0	1/1:2,33:35:90.14:869,90,0	1/1:1,23:24:69.11:666,69,0	0/0:25,0:24:69.21:0,69,834	0/0:34,0:34:90.20:0,90,1046	1/1:0,23:23:69.11:666,69,0	1/1:6,22:28:66.10:637,66,0	1/1:3,26:29:72.11:695,72,0	1/1:4,13:18:35.08:325,35,0	1/1:2,18:20:51.08:493,51,0	1/1:0,28:28:81.13:782,81,0	1/1:1,18:19:51.08:493,51,0	1/1:3,28:31:84.13:811,84,0	1/1:3,30:33:81.13:782,81,0	1/1:1,18:19:51.08:493,51,0
chr10	63525754	.	G	GAAAAA	6152.37	PASS	AB=0.587;AC=46;AF=0.821;AN=56;BaseQRankSum=-1.056;DP=613;FS=3.623;HRun=13;HaplotypeScore=134.2704;InbreedingCoeff=0.5315;MQ=65.27;MQ0=2;MQRankSum=-1.355;QD=11.83;ReadPosRankSum=-4.149;VQSLOD=0.9975;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:45:11.21:0,11,365	1/1:0,0:7:8.84:101,9,0	0/0:7,0:6:11.94:0,12,141	0/0:12,0:9:0.73:0,1,19	0/0:6,0:24:5.24:0,5,107	0/1:9,0:25:7.43:298,0,7	1/1:5,0:16:14.38:117,14,0	1/1:15,0:34:63.97:619,64,0	1/1:5,5:16:3.01:71,3,0	1/1:9,0:30:59.29:595,59,0	1/1:6,0:20:16.54:178,17,0	1/1:10,0:25:9.01:89,9,0	1/1:4,0:24:5.97:39,6,0	1/1:1,0:16:5.23:42,5,0	1/1:1,0:18:12.50:148,13,0	1/1:8,0:23:24.06:318,24,0	1/1:4,0:26:28.76:377,29,0	1/1:4,0:13:17.18:175,17,0	1/1:9,0:22:48.22:587,48,0	1/1:5,0:21:41.78:522,42,0	1/1:7,0:18:14.70:155,15,0	1/1:5,0:22:24.53:214,25,0	1/1:5,0:25:28.06:168,28,0	0/1:8,0:34:19.81:164,0,20	1/1:3,0:17:12.03:125,12,0	1/1:9,0:29:57.02:572,57,0	1/1:8,0:19:12.03:135,12,0	1/1:5,0:18:32.75:344,33,0
chr10	63526740	.	TTGTGTG	T	1387.80	PASS	AB=0.908;AC=14;AF=0.259;AN=54;BaseQRankSum=3.458;DP=536;FS=0.000;HRun=0;HaplotypeScore=148.9844;InbreedingCoeff=0.4152;MQ=61.30;MQ0=9;MQRankSum=-2.499;QD=7.93;ReadPosRankSum=3.026;VQSLOD=2.2964;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:20,24:48:8.23:194,0,8	0/0:18,0:18:27.52:0,28,569	0/0:25,0:15:2.99:0,3,24	0/0:29,0:15:17.54:0,18,195	1/1:10,9:20:5.98:62,6,0	0/0:13,0:13:2.62:0,3,73	0/0:14,0:24:3.01:0,3,50	0/0:24,0:24:31.62:0,32,452	0/0:10,0:10:2.92:0,3,64	0/0:33,0:32:63.12:0,63,1229	./.	0/0:11,0:11:2.94:0,3,25	1/1:13,0:21:18.06:260,18,0	0/0:11,0:11:2.74:0,3,53	0/0:12,0:12:2.95:0,3,50	0/0:14,0:14:3.01:0,3,78	0/0:29,0:29:45.13:0,45,1107	0/0:16,0:16:24.08:0,24,578	0/0:10,0:8:9.01:0,9,98	0/1:9,0:8:0:0,0,0	0/0:28,0:26:11.98:0,12,181	1/1:10,0:19:39.06:489,39,0	1/1:5,0:8:12.03:155,12,0	1/1:14,0:21:6.02:86,6,0	0/0:24,0:24:8.76:0,9,149	0/1:14,0:14:37.08:37,0,83	0/0:17,0:18:15.23:0,15,282	0/1:15,0:14:45.68:263,0,46
chr10	63526771	.	T	TGTGC	3886.25	PASS	AB=1.000;AC=38;AF=0.679;AN=56;BaseQRankSum=-5.569;DP=509;FS=0.000;HRun=0;HaplotypeScore=140.2005;InbreedingCoeff=0.6514;MQ=47.27;MQ0=7;MQRankSum=3.921;QD=10.65;ReadPosRankSum=-1.183;VQSLOD=2.5838;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:35.91:0,36,343	1/1:2,9:16:21:428,21,0	0/0:11,0:3:8.70:0,9,54	0/0:18,0:6:0.23:0,0,29	0/0:16,0:16:17.93:0,18,152	1/1:19,0:18:14.27:102,14,0	1/1:22,0:19:14.53:106,15,0	1/1:6,25:35:70.86:585,71,0	1/1:8,0:8:1.92:12,2,0	1/1:31,0:30:47.60:372,48,0	0/1:14,0:14:0:0,0,0	1/1:6,0:6:2.49:20,2,0	0/0:15,0:15:17.94:0,18,157	1/1:11,0:11:8.67:67,9,0	1/1:9,0:9:5.46:43,5,0	1/1:0,0:21:3.01:52,3,0	1/1:0,26:30:42.08:1034,42,0	1/1:1,22:25:24.05:594,24,0	1/1:15,0:13:10.90:66,11,0	1/1:11,0:10:5.93:40,6,0	1/1:32,0:28:5.54:49,6,0	0/0:17,0:17:32.91:0,33,288	0/0:8,0:8:9.01:0,9,84	0/0:22,0:22:8.84:0,9,73	1/1:22,0:22:11.55:95,12,0	1/1:6,0:6:8.22:36,8,0	1/1:1,0:19:10.70:169,11,0	0/1:13,0:13:15.11:15,0,67
chr10	63526773	.	CGT	C	901.23	PASS	AB=1.000;AC=24;AF=0.429;AN=56;BaseQRankSum=1.813;DP=485;FS=9.078;HRun=0;HaplotypeScore=133.3239;InbreedingCoeff=0.4175;MQ=48.88;MQ0=6;MQRankSum=-4.468;QD=4.31;ReadPosRankSum=-1.682;VQSLOD=2.2512;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:37.45:0,37,453	0/0:13,0:13:4.15:0,4,125	0/0:12,0:4:7.57:0,8,48	0/0:18,0:6:6.89:0,7,34	0/0:17,0:17:20.41:0,20,239	0/1:20,0:19:11.04:11,0,38	1/1:23,0:20:2.51:23,3,0	0/0:36,0:36:48.24:0,48,1026	0/0:8,0:8:2.68:0,3,33	0/0:30,0:29:5.02:0,5,327	0/1:14,0:14:0:0,0,0	0/1:6,0:6:0:0,0,0	1/1:1,14:15:18.05:208,18,0	0/1:11,0:11:16.61:18,0,17	1/1:12,0:12:5.93:45,6,0	0/0:8,0:8:2.84:0,3,14	0/0:29,0:29:44.08:0,44,300	0/0:24,0:24:17.04:0,17,112	1/1:15,0:13:14.65:79,15,0	1/1:11,0:10:0.26:1,0,0	0/0:31,0:28:5.90:0,6,44	1/1:1,15:16:31.34:353,31,0	1/1:1,7:8:8.63:103,9,0	1/1:2,20:22:8.83:102,9,0	1/1:18,0:18:0.47:1,0,0	0/1:6,0:6:29.80:35,0,30	0/0:10,0:10:8.62:0,9,45	0/1:12,0:12:14.44:87,0,14
chr10	63526775	.	T	TGC	1166.62	PASS	AB=0.927;AC=39;AF=0.696;AN=56;BaseQRankSum=1.373;DP=483;FS=1.359;HRun=0;HaplotypeScore=144.1964;InbreedingCoeff=0.4633;MQ=50.29;MQ0=5;MQRankSum=-3.531;QD=3.27;ReadPosRankSum=0.556;VQSLOD=2.8147;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:47.02:0,47,536	0/1:13,0:13:12.34:12,0,35	0/0:9,0:4:8.97:0,9,71	0/0:17,0:7:1.25:0,1,3	0/0:16,0:16:21.05:0,21,253	1/1:20,0:19:19.21:121,19,0	1/1:22,0:19:18.22:130,18,0	0/0:36,0:36:69.88:0,70,623	1/1:9,0:9:6.18:33,6,0	1/1:29,0:28:48.13:290,48,0	0/1:6,8:14:0:0,0,0	1/1:7,0:7:3.45:22,3,0	1/1:15,0:15:3.05:14,3,0	1/1:12,0:12:8.95:71,9,0	1/1:11,0:11:9.39:64,9,0	1/1:8,0:8:3:27,3,0	0/1:29,0:29:4.77:5,0,76	0/1:26,0:26:0.16:0,0,37	1/1:13,0:11:9.45:74,9,0	1/1:12,0:11:5.94:41,6,0	1/1:33,0:31:5.86:50,6,0	1/1:16,0:16:1.52:15,2,0	0/0:8,0:8:1.13:0,1,2	0/1:22,0:22:4.59:9,0,5	1/1:18,0:18:6.44:45,6,0	1/1:6,0:6:14.72:118,15,0	1/1:11,0:11:8.88:80,9,0	1/1:11,0:11:14.83:106,15,0
chr10	63526902	.	G	GGCTTAGCA	33514.44	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-8.454;DP=463;FS=4.149;HRun=0;HaplotypeScore=105.7479;InbreedingCoeff=0.9900;MQ=76.87;MQ0=0;MQRankSum=-12.875;QD=90.34;ReadPosRankSum=-0.274;VQSLOD=5.0430;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,108,2996	1/1:1,8:13:29.84:1222,30,0	0/0:17,0:17:48.13:0,48,1240	0/0:23,0:23:57.20:0,57,1520	0/0:15,0:14:38.87:0,39,1070	1/1:2,8:14:27.09:1203,27,0	1/1:9,13:27:57.19:2294,57,0	1/1:17,16:33:96.33:3930,96,0	1/1:3,8:14:27.09:1203,27,0	1/1:3,10:16:39.12:1532,39,0	1/1:5,7:14:23.98:1015,24,0	1/1:3,7:13:27.09:1149,27,0	1/1:6,5:12:30.10:1301,30,0	1/1:5,4:12:23.96:729,24,0	1/1:4,9:14:36.12:1567,36,0	1/1:4,9:16:33.11:1455,33,0	1/1:4,5:10:18.06:695,18,0	1/1:4,11:17:39.13:1632,39,0	1/1:6,8:16:39.07:1352,39,0	1/1:3,7:12:30.02:997,30,0	1/1:10,8:25:48.03:1544,48,0	1/1:2,7:12:30.06:1151,30,0	1/1:1,10:12:27.09:1203,27,0	1/1:10,9:21:38.06:1401,38,0	1/1:3,10:15:42.10:1694,42,0	1/1:3,8:12:36.12:1479,36,0	1/1:5,8:12:27.09:1100,27,0	1/1:2,3:8:15.05:664,15,0
chr10	63527060	.	ATATCTCTC	A	962.76	PASS	AB=0.987;AC=11;AF=0.196;AN=56;BaseQRankSum=-1.009;DP=488;FS=17.652;HRun=0;HaplotypeScore=133.6194;InbreedingCoeff=0.1877;MQ=70.30;MQ0=14;MQRankSum=-3.096;QD=8.83;ReadPosRankSum=-1.086;VQSLOD=1.0810;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:35.85:0,36,376	0/1:8,0:8:56.86:101,0,57	0/0:31,0:20:46.38:0,46,480	0/0:50,0:30:61.50:0,62,602	0/0:23,0:22:60.01:0,60,643	0/0:18,0:18:32.80:0,33,719	0/0:19,0:18:37.83:0,38,687	0/1:17,0:17:17.05:269,0,17	1/1:1,15:16:2.94:18,3,0	0/0:24,0:23:62.32:0,62,1004	0/0:15,0:14:24.04:0,24,448	0/0:17,0:16:24.01:0,24,496	0/1:12,0:12:8.56:9,0,174	0/0:17,0:17:30.91:0,31,658	0/0:14,0:14:36.03:0,36,672	0/0:27,0:27:57.02:0,57,1134	0/1:9,0:8:18.02:18,0,263	0/1:11,0:11:20.68:126,0,21	0/0:14,0:14:38.81:0,39,515	0/0:10,0:10:26.94:0,27,384	0/0:16,0:15:41.67:0,42,481	1/1:14,0:14:23.96:200,24,0	0/0:12,0:12:20.65:0,21,224	0/0:17,0:16:23.79:0,24,454	0/0:16,0:15:26.81:0,27,473	0/1:12,0:12:7.99:268,0,8	0/0:19,0:18:41.88:0,42,561	0/1:9,0:9:16.50:105,0,17
chr10	63527062	.	A	ATC	429.73	PASS	AB=0.986;AC=27;AF=0.540;AN=50;BaseQRankSum=0.344;DP=508;FS=11.189;HRun=0;HaplotypeScore=102.8824;InbreedingCoeff=0.0473;MQ=68.16;MQ0=18;MQRankSum=-0.513;QD=1.09;ReadPosRankSum=-3.553;VQSLOD=0.2042;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:22:3:25,3,0	0/0:9,0:9:2.84:0,3,18	./.	0/1:48,0:28:0:0,0,0	1/1:25,0:24:2.99:24,3,0	1/1:20,0:19:10.26:71,10,0	0/1:19,0:17:1.37:52,0,1	1/1:21,0:20:7.22:39,7,0	./.	0/1:22,0:22:13.07:13,0,79	0/0:15,0:14:8.95:0,9,68	0/1:16,0:15:1.95:40,0,2	1/1:13,0:13:2.15:7,2,0	0/1:18,0:18:7.95:69,0,8	0/1:16,0:16:0.33:0,0,8	0/1:27,0:27:52.21:55,0,52	0/0:10,0:9:10.79:0,11,70	0/0:10,0:10:0.89:0,1,2	0/1:15,0:15:5.48:5,0,39	0/1:10,0:10:15.03:18,0,15	1/1:17,0:16:0.89:2,1,0	0/1:18,0:18:0:0,0,0	./.	1/1:20,0:17:8.97:88,9,0	0/1:16,0:15:10.45:10,0,17	0/0:12,0:12:2.95:0,3,24	0/1:14,4:17:3.25:39,0,3	0/1:10,0:9:0.21:0,0,14
chr10	63527105	.	T	TCACACACACACACACA	2911.92	PASS	AB=1.000;AC=33;AF=0.688;AN=48;BaseQRankSum=-5.147;DP=404;FS=44.655;HRun=0;HaplotypeScore=148.0487;InbreedingCoeff=0.1016;MQ=41.14;MQ0=23;MQRankSum=-3.682;QD=9.74;ReadPosRankSum=-2.904;VQSLOD=0.0927;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:22,1:21:0.69:2,1,0	1/1:7,0:7:9.02:201,9,0	./.	0/1:10,0:3:2.99:5,0,3	1/1:17,0:14:3.01:70,3,0	0/0:9,0:14:3.01:0,3,47	0/1:19,0:17:28.68:29,0,219	1/1:31,0:26:27.05:627,27,0	1/1:13,0:12:0.47:1,0,0	0/1:19,0:18:59.32:59,0,92	0/1:16,0:14:0.01:0,0,0	1/1:18,0:17:0.47:1,0,0	1/1:6,0:4:3.01:177,3,0	0/1:13,0:12:21.97:22,0,287	0/0:20,0:20:2.97:0,3,131	0/0:20,0:20:0.17:0,0,43	1/1:22,0:20:3.41:407,3,0	1/1:5,0:5:3.01:152,3,0	0/1:10,0:10:13.35:13,0,190	./.	0/0:21,0:18:12.04:0,12,200	./.	./.	1/1:17,0:13:2.49:17,2,0	1/1:9,0:8:3:26,3,0	1/1:17,0:17:27.05:812,27,0	0/1:16,0:13:77.29:77,0,107	1/1:8,0:8:10:343,10,0
chr10	63527136	.	C	CAT	3904.72	PASS	AB=0.706;AC=33;AF=0.589;AN=56;BaseQRankSum=7.304;DP=503;FS=22.225;HRun=0;HaplotypeScore=102.8959;InbreedingCoeff=0.5918;MQ=51.53;MQ0=13;MQRankSum=2.691;QD=12.76;ReadPosRankSum=2.828;VQSLOD=1.7520;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:30:26.72:0,27,276	0/0:7,0:7:7.80:0,8,52	0/0:14,0:7:20.69:0,21,158	0/0:24,0:15:28.85:0,29,270	0/0:17,0:15:15.44:0,15,122	1/1:20,1:19:20.97:184,21,0	1/1:18,0:18:39.05:483,39,0	0/0:21,0:17:45.82:0,46,327	1/1:16,0:15:7.38:108,7,0	0/1:13,3:17:25.62:273,0,26	1/1:14,6:21:3.04:153,3,0	0/0:4,20:23:0.97:0,1,2	1/1:3,0:11:2.42:35,2,0	1/1:20,0:19:45.13:548,45,0	0/0:10,0:30:2.99:0,3,23	1/1:2,14:18:2.28:35,2,0	0/0:19,0:18:26.28:0,26,190	0/0:9,0:9:15.82:0,16,118	1/1:10,5:14:38.87:427,39,0	1/1:7,3:10:11.93:92,12,0	1/1:27,1:26:41.16:387,41,0	1/1:14,2:16:14.92:116,15,0	1/1:8,0:7:3:25,3,0	1/1:20,0:17:16.84:142,17,0	1/1:12,0:12:18:174,18,0	0/1:11,0:25:57.06:321,0,57	1/1:15,2:16:35.54:339,36,0	0/1:5,1:10:23.24:63,0,23
chr10	63527400	.	A	AT	8667.72	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-11.637;DP=437;FS=1.303;HRun=7;HaplotypeScore=39.1787;InbreedingCoeff=0.9511;MQ=67.73;MQ0=1;MQRankSum=-0.899;QD=30.63;ReadPosRankSum=2.106;VQSLOD=4.9154;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:69.08:0,69,657	0/0:4,0:4:12.02:0,12,116	0/0:8,0:5:3:0,3,40	0/0:14,0:9:14.93:0,15,126	0/0:21,0:21:57.08:0,57,546	1/1:1,18:19:48.15:580,48,0	1/1:0,11:11:33.10:398,33,0	0/0:32,0:32:78.11:0,78,749	1/1:0,8:8:24.07:290,24,0	1/1:1,13:14:39.12:470,39,0	1/1:3,17:20:51.03:580,51,0	1/1:3,11:14:30.09:361,30,0	1/1:0,6:6:18.06:217,18,0	1/1:0,6:6:18.06:217,18,0	1/1:1,15:16:42.13:507,42,0	1/1:1,7:8:21.06:254,21,0	0/0:30,0:30:87.10:0,87,828	0/0:19,0:19:57.08:0,57,544	1/1:2,17:19:51.13:602,51,0	1/1:2,21:23:63.16:744,63,0	1/1:2,4:6:12.04:145,12,0	1/1:1,8:9:21.06:254,21,0	1/1:1,9:10:21.06:254,21,0	1/1:0,10:10:21.06:254,21,0	1/1:1,17:18:42.13:507,42,0	1/1:5,30:35:90.28:1085,90,0	1/1:2,20:22:54.13:637,54,0	1/1:1,8:9:27.06:313,27,0
chr10	63529044	.	TTTC	T	2880.15	PASS	AB=0.964;AC=34;AF=0.607;AN=56;BaseQRankSum=8.564;DP=477;FS=8.349;HRun=0;HaplotypeScore=80.0880;InbreedingCoeff=0.7666;MQ=61.85;MQ0=13;MQRankSum=-2.208;QD=11.21;ReadPosRankSum=-3.522;VQSLOD=1.5717;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:39:91.26:0,91,1406	0/0:10,0:10:23.92:0,24,281	0/1:26,0:9:16.35:16,0,56	0/0:24,0:9:7.14:0,7,75	0/0:15,0:14:38.27:0,38,599	1/1:15,2:17:38.14:297,38,0	1/1:15,0:15:17.46:103,17,0	0/0:43,0:42:91.13:0,91,1328	0/0:13,0:12:11.91:0,12,128	1/1:18,2:20:51.89:407,52,0	1/1:11,1:12:27.04:211,27,0	0/1:12,1:13:1.11:169,0,1	1/1:9,0:9:19.87:127,20,0	1/1:13,0:13:3.06:154,3,0	1/1:17,0:17:38.30:254,38,0	1/1:10,0:10:18.70:122,19,0	0/0:33,0:33:59.35:0,59,1262	0/0:16,0:15:2.75:0,3,664	1/1:23,0:21:29.94:280,30,0	1/1:12,2:14:19.32:188,19,0	1/1:8,1:9:14.48:110,14,0	1/1:6,0:6:10.91:58,11,0	1/1:7,0:7:7.21:58,7,0	1/1:16,0:16:1.82:5,2,0	1/1:7,2:9:25.76:207,26,0	0/0:19,0:18:20.79:0,21,506	1/1:20,1:21:35.26:320,35,0	0/0:7,0:7:18.04:0,18,277
chr10	63529045	.	TTC	T	4222.37	PASS	AB=1.000;AC=36;AF=0.643;AN=56;BaseQRankSum=8.846;DP=476;FS=15.692;HRun=0;HaplotypeScore=68.1752;InbreedingCoeff=0.8101;MQ=61.83;MQ0=13;MQRankSum=-4.763;QD=15.41;ReadPosRankSum=-3.265;VQSLOD=2.7641;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:39:66.72:0,67,1044	0/0:10,0:10:23.03:0,23,211	0/1:27,0:9:1.07:1,0,70	0/0:24,0:9:0.08:0,0,37	0/0:16,0:15:31.32:0,31,472	1/1:16,1:17:40.44:337,40,0	1/1:5,8:13:17.97:191,18,0	0/0:43,0:42:93.77:0,94,1127	0/0:13,0:12:11.86:0,12,102	1/1:20,0:20:56.63:442,57,0	1/1:4,8:12:29.94:288,30,0	1/1:12,0:12:21.65:239,22,0	1/1:9,0:9:20.93:201,21,0	1/1:13,0:13:28.83:225,29,0	1/1:14,2:16:41.80:365,42,0	1/1:10,0:10:20.15:172,20,0	0/0:33,0:33:60.86:0,61,1003	0/0:16,0:15:17.77:0,18,526	1/1:22,1:21:52.98:435,53,0	1/1:12,2:14:35.51:272,36,0	1/1:5,4:9:14.65:99,15,0	1/1:6,0:6:14.21:129,14,0	1/1:7,0:7:15.08:101,15,0	1/1:16,0:16:2.96:19,3,0	1/1:10,0:10:29.88:267,30,0	0/1:19,0:18:7.01:7,0,380	1/1:21,0:21:47.17:432,47,0	0/0:7,0:7:17.59:0,18,202
chr10	63529046	.	TC	T	4012.04	PASS	AB=0.890;AC=36;AF=0.643;AN=56;BaseQRankSum=9.856;DP=476;FS=23.117;HRun=1;HaplotypeScore=62.2153;InbreedingCoeff=0.8032;MQ=61.87;MQ0=13;MQRankSum=-3.434;QD=14.91;ReadPosRankSum=-2.992;VQSLOD=1.3235;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:40:17.59:0,18,700	0/0:10,0:10:13.68:0,14,144	0/1:24,1:9:2.76:3,0,64	0/0:25,0:9:3.08:0,3,28	0/0:16,0:15:38.23:0,38,359	1/1:16,0:16:41.54:305,42,0	1/1:8,4:12:17.74:128,18,0	0/0:43,0:42:90.54:0,91,925	0/0:12,0:11:11.68:0,12,77	1/1:20,0:20:57.41:420,57,0	1/1:10,2:12:29.80:222,30,0	1/1:9,3:12:29.42:233,29,0	1/1:8,1:9:20.83:165,21,0	1/1:15,0:15:41.45:297,41,0	1/1:12,4:16:40.98:300,41,0	1/1:8,2:10:19.17:160,19,0	0/0:33,0:33:40.01:0,40,707	0/0:15,1:15:18.87:0,19,395	1/1:21,1:20:55.26:386,55,0	1/1:10,4:14:35.05:315,35,0	1/1:7,1:8:14.73:100,15,0	1/1:5,1:6:15.01:149,15,0	1/1:5,2:7:16.11:139,16,0	1/1:0,16:16:3.01:41,3,0	1/1:9,1:10:29.84:246,30,0	0/1:14,4:17:12.95:13,0,287	1/1:17,4:21:47.70:393,48,0	0/0:11,0:11:16.85:0,17,209
chr10	63529489	.	ACAT	A	3171.08	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=7.601;DP=711;FS=2.091;HRun=0;HaplotypeScore=112.3708;InbreedingCoeff=0.9974;MQ=80.27;MQ0=0;MQRankSum=-4.006;QD=37.75;ReadPosRankSum=-0.958;VQSLOD=4.4712;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,117,2627	1/1:1,7:8:21.07:350,21,0	0/0:30,0:29:63.40:0,63,1609	0/0:30,0:29:37.08:0,37,1241	0/0:22,0:22:63.22:0,63,1376	0/0:29,0:29:87.28:0,87,1927	0/0:17,0:17:48.16:0,48,1030	1/1:2,37:39:99:1693,111,0	0/0:24,0:24:69.24:0,69,1563	0/0:22,0:21:66.23:0,66,1495	0/0:8,0:8:21.07:0,21,474	0/0:32,0:32:93.32:0,93,2087	0/0:33,0:33:96.32:0,96,2131	0/0:24,0:24:66.21:0,66,1412	0/0:29,0:29:84.27:0,84,1823	0/0:28,0:28:84.27:0,84,1860	1/1:2,23:25:51.17:839,51,0	1/1:1,11:12:27.09:450,27,0	0/0:34,0:34:99:0,99,2115	0/0:29,0:29:75.24:0,75,1611	0/0:26,0:26:78.27:0,78,1767	0/0:29,0:29:84.29:0,84,1806	0/0:17,0:17:51.18:0,51,1153	0/0:25,0:25:69.24:0,69,1505	0/0:15,0:15:39.13:0,39,883	0/0:32,0:32:96.33:0,96,2176	0/0:39,0:39:99:0,117,2624	0/0:14,0:14:39.13:0,39,864
chr10	63530092	.	C	CAA	2361.09	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=0.345;DP=617;FS=0.000;HRun=12;HaplotypeScore=85.6050;InbreedingCoeff=0.9646;MQ=52.47;MQ0=41;MQRankSum=-0.167;QD=14.76;ReadPosRankSum=-2.157;VQSLOD=2.1953;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,1:26:43.44:200,43,0	1/1:0,11:12:23.56:294,24,0	0/0:16,0:9:13.87:0,14,138	0/0:11,0:6:12.83:0,13,66	1/1:8,0:26:15.17:110,15,0	0/0:18,0:12:20.91:0,21,187	0/0:19,0:16:38.99:0,39,361	1/1:17,22:33:74.75:945,75,0	0/0:27,0:18:8.95:0,9,84	0/0:24,0:23:58.92:0,59,506	0/0:28,0:27:45.04:0,45,463	0/0:22,0:15:14.80:0,15,185	0/0:21,0:20:29.93:0,30,278	0/0:15,0:16:14.92:0,15,186	0/0:18,0:13:20.97:0,21,192	0/0:17,0:17:35.59:0,36,333	1/1:7,19:24:48.15:646,48,0	1/1:5,12:18:29.53:351,30,0	0/0:19,0:17:26.75:0,27,296	0/0:16,0:18:43.58:0,44,381	0/0:15,0:14:32.52:0,33,289	0/0:18,0:20:35.81:0,36,371	0/0:15,0:15:26.90:0,27,250	0/0:17,0:17:20.94:0,21,194	0/0:30,0:31:62.51:0,63,607	0/0:26,0:24:41.79:0,42,435	0/0:28,0:26:41.68:0,42,373	0/0:10,0:13:20.62:0,21,225
chr10	63531284	.	C	CAAAAA	6034.87	PASS	AB=0.830;AC=46;AF=0.821;AN=56;BaseQRankSum=1.644;DP=455;FS=1.857;HRun=16;HaplotypeScore=106.4870;InbreedingCoeff=0.4130;MQ=47.06;MQ0=31;MQRankSum=-3.863;QD=15.88;ReadPosRankSum=-2.913;VQSLOD=1.1256;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:34.25:0,34,429	1/1:5,1:6:14.80:157,15,0	0/0:12,0:4:2.22:0,2,27	0/1:5,0:4:4.98:5,0,50	0/0:22,0:27:46.68:0,47,556	1/1:15,1:16:23.40:337,23,0	1/1:11,0:10:18.06:276,18,0	1/1:21,0:24:40.21:496,40,0	0/1:14,0:15:32.16:38,0,32	0/1:9,4:15:6.98:318,0,7	1/1:9,3:16:18.06:291,18,0	1/1:14,0:14:15.01:199,15,0	1/1:13,0:13:19.86:249,20,0	1/1:13,0:13:23.51:309,24,0	1/1:9,6:16:1.82:8,2,0	1/1:17,1:19:18.53:287,19,0	1/1:15,3:17:23.40:368,23,0	1/1:20,1:21:12.65:266,13,0	1/1:19,1:20:16.78:224,17,0	0/1:9,0:12:23.26:197,0,23	1/1:4,0:2:3.01:43,3,0	1/1:9,0:12:10.85:182,11,0	1/1:11,1:11:21.03:313,21,0	1/1:8,0:8:6.02:91,6,0	1/1:12,0:14:25.63:397,26,0	1/1:7,0:16:30.07:504,30,0	1/1:23,0:21:16.83:205,17,0	1/1:11,1:14:10.27:276,10,0
chr10	63531595	.	T	TAA	8762.73	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-2.367;DP=447;FS=11.558;HRun=10;HaplotypeScore=73.8192;InbreedingCoeff=0.9522;MQ=52.30;MQ0=6;MQRankSum=-4.475;QD=29.60;ReadPosRankSum=0.036;VQSLOD=3.8036;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:72.05:0,72,732	0/0:4,0:4:12.03:0,12,122	0/0:3,0:3:8.91:0,9,76	0/0:7,0:7:19.29:0,19,186	0/0:31,0:31:47.86:0,48,471	1/1:0,13:14:24.08:357,24,0	1/1:2,8:13:31.57:385,32,0	0/0:23,0:19:45.08:0,45,453	1/1:1,15:19:44.64:632,45,0	1/1:5,15:22:44.64:629,45,0	1/1:3,13:17:41.58:563,42,0	1/1:4,5:9:21.03:271,21,0	1/1:1,8:10:21.07:312,21,0	1/1:2,7:9:21.07:313,21,0	1/1:3,15:20:44.12:598,44,0	1/1:2,10:13:29.59:411,30,0	0/0:26,0:25:60.09:0,60,609	0/0:23,0:23:63.07:0,63,631	1/1:7,10:16:30.10:444,30,0	1/1:2,16:17:42.05:557,42,0	1/1:1,6:7:12.04:179,12,0	1/1:2,4:5:6.02:89,6,0	1/1:2,7:9:17.55:232,18,0	1/1:0,5:5:12.04:179,12,0	1/1:3,12:17:32.60:456,33,0	1/1:5,15:21:51.15:717,51,0	1/1:4,19:25:50.66:726,51,0	1/1:3,19:22:48.16:715,48,0
chr10	63531634	.	AT	A	2385.60	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-5.913;DP=544;FS=18.367;HRun=1;HaplotypeScore=98.9949;InbreedingCoeff=0.9809;MQ=75.51;MQ0=0;MQRankSum=1.395;QD=33.60;ReadPosRankSum=0.947;VQSLOD=2.0128;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,36:36:90.26:1235,90,0	0/0:10,0:10:30.10:0,30,477	0/0:21,0:21:60.07:0,60,838	0/0:23,0:23:61.58:0,62,877	1/1:0,35:35:93.29:1272,93,0	0/0:24,0:24:60.03:0,60,884	0/0:15,0:15:45.15:0,45,717	0/0:26,0:26:72.23:0,72,1109	0/0:18,0:18:47.76:0,48,761	0/0:20,0:20:60.20:0,60,958	0/0:15,0:15:39.13:0,39,600	0/0:14,0:14:39.05:0,39,565	0/0:9,0:9:20.99:0,21,305	0/0:17,0:17:51.11:0,51,781	0/0:22,0:22:57.12:0,57,857	0/0:15,0:15:45.09:0,45,687	0/0:26,0:26:75.17:0,75,1157	0/0:19,0:19:57.04:0,57,842	0/0:21,0:21:60.18:0,60,907	0/0:17,0:17:48.16:0,48,765	0/0:29,0:29:78.11:0,78,1174	0/0:5,0:5:11.95:0,12,149	0/0:11,0:11:27.09:0,27,429	0/0:11,0:11:30.02:0,30,448	0/0:17,0:17:42.09:0,42,640	0/0:24,0:24:72.23:0,72,1125	0/0:25,0:25:63.16:0,63,972	0/0:19,0:19:45.12:0,45,670
chr10	63533372	.	A	AAATGT	26680.59	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-13.406;DP=574;FS=23.406;HRun=0;HaplotypeScore=87.5337;InbreedingCoeff=0.9855;MQ=63.01;MQ0=0;MQRankSum=-6.960;QD=70.21;ReadPosRankSum=2.682;VQSLOD=3.9702;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:96.25:0,96,1941	0/0:6,0:6:15.05:0,15,302	0/0:21,0:21:52.06:0,52,1037	0/0:12,0:12:11.67:0,12,429	0/0:38,0:38:99:0,111,2257	1/1:3,19:22:57.20:1732,57,0	1/1:6,15:22:51.18:1539,51,0	0/0:38,0:38:99:0,108,2171	1/1:1,13:16:36.12:1125,36,0	1/1:2,28:30:84.29:2512,84,0	1/1:3,19:22:45.15:1273,45,0	1/1:1,13:14:39.13:1220,39,0	1/1:8,17:26:57.20:1699,57,0	1/1:3,13:16:42.14:1285,42,0	1/1:3,11:15:33.11:1011,33,0	1/1:1,14:15:39.13:1215,39,0	0/0:26,0:26:72.22:0,72,1461	0/0:20,0:20:60.16:0,60,1231	1/1:3,9:14:39.08:883,39,0	1/1:3,22:26:63.22:1847,63,0	1/1:1,11:14:24.08:708,24,0	1/1:2,16:18:42.14:1204,42,0	1/1:3,22:25:54.18:1624,54,0	1/1:3,10:13:21.07:658,21,0	1/1:1,14:16:36.12:1106,36,0	1/1:5,18:24:69.24:2024,69,0	1/1:3,22:27:54.19:1659,54,0	1/1:2,3:5:12.04:356,12,0
chr10	63533722	.	T	TTTTAA	39885.33	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-5.194;DP=564;FS=20.013;HRun=0;HaplotypeScore=102.1733;InbreedingCoeff=0.9582;MQ=67.70;MQ0=0;MQRankSum=-7.394;QD=75.11;ReadPosRankSum=3.513;VQSLOD=5.1780;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,23:26:72.25:2147,72,0	1/1:1,6:8:14.94:403,15,0	0/0:21,0:21:45.15:0,45,869	0/0:12,0:12:24.04:0,24,443	1/1:5,27:33:87.25:2411,87,0	1/1:1,17:18:48.16:1439,48,0	1/1:4,9:13:27.09:810,27,0	1/1:12,25:38:99:3078,108,0	1/1:0,14:15:45.15:1343,45,0	1/1:6,17:24:63.22:1832,63,0	1/1:2,22:26:72.25:2027,72,0	1/1:4,11:17:36.12:1088,36,0	1/1:7,10:18:42.14:1193,42,0	1/1:2,15:19:48.16:1439,48,0	1/1:3,14:17:45.15:1310,45,0	1/1:4,20:23:69.24:2032,69,0	1/1:2,20:22:54.19:1611,54,0	1/1:5,12:17:45.15:1199,45,0	1/1:7,9:17:51.13:1265,51,0	1/1:7,26:33:87.30:2530,87,0	1/1:6,2:8:12.04:285,12,0	1/1:0,5:5:12.04:362,12,0	1/1:6,18:25:54.19:1600,54,0	1/1:0,10:11:24.08:724,24,0	1/1:3,22:26:72.25:2152,72,0	1/1:5,24:29:84.29:2438,84,0	1/1:6,24:31:78.27:2351,78,0	1/1:0,10:11:27.09:817,27,0
chr10	63534585	.	T	TGGAAA	23398.16	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-7.757;DP=543;FS=6.961;HRun=0;HaplotypeScore=141.5367;InbreedingCoeff=0.9794;MQ=81.63;MQ0=0;MQRankSum=-15.734;QD=66.47;ReadPosRankSum=2.006;VQSLOD=5.9002;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:60.18:0,60,1162	0/0:10,0:10:30.09:0,30,564	0/0:27,0:27:57.17:0,57,1037	0/0:22,0:22:7.40:0,7,733	0/0:33,0:33:87.30:0,87,1723	1/1:5,16:21:57.20:1566,57,0	1/1:6,7:13:27.09:765,27,0	0/0:34,0:34:72.09:0,72,1302	1/1:3,12:15:39.13:1134,39,0	1/1:8,14:23:54.18:1543,54,0	1/1:6,17:24:63.09:1624,63,0	1/1:3,12:15:42.14:1253,42,0	1/1:6,15:21:45.14:1227,45,0	1/1:6,3:9:18.06:533,18,0	1/1:8,16:24:54.18:1442,54,0	1/1:4,11:15:39.12:1095,39,0	0/0:22,0:22:60.21:0,60,1199	0/0:23,0:23:66.15:0,66,1183	1/1:8,8:16:36.12:987,36,0	1/1:6,14:20:51.15:1392,51,0	1/1:8,5:13:21.07:544,21,0	1/1:5,8:13:30.10:808,30,0	1/1:7,14:21:48.16:1309,48,0	1/1:2,6:8:12.51:338,13,0	1/1:5,18:23:57.18:1642,57,0	1/1:6,20:26:63.21:1824,63,0	1/1:5,15:20:48.16:1367,48,0	1/1:2,10:12:36.11:1004,36,0
chr10	63534746	.	A	AAT	8663.85	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-11.813;DP=430;FS=0.394;HRun=0;HaplotypeScore=46.3830;InbreedingCoeff=0.8546;MQ=57.69;MQ0=8;MQRankSum=1.174;QD=36.56;ReadPosRankSum=4.342;VQSLOD=6.9276;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:87.25:0,87,1253	0/0:8,0:8:24.05:0,24,334	0/0:8,0:6:11.54:0,12,143	0/0:4,0:2:3.01:0,3,45	0/0:20,0:20:57.15:0,57,825	1/1:2,14:17:29.08:647,29,0	1/1:1,5:5:12.04:219,12,0	0/0:37,0:37:99:0,102,1355	1/1:1,5:7:15.05:273,15,0	1/1:0,21:21:60.21:1092,60,0	1/1:0,18:18:51:852,51,0	1/1:2,8:10:1.80:204,2,0	1/1:0,7:7:18.06:328,18,0	1/1:0,10:10:21.07:384,21,0	1/1:2,14:14:20.04:483,20,0	1/1:0,7:7:15.05:273,15,0	0/0:26,0:26:72.24:0,72,1051	0/0:19,0:18:54.18:0,54,773	1/1:2,13:13:36.11:627,36,0	1/1:1,11:12:27.09:490,27,0	1/1:1,20:20:45.09:786,45,0	1/1:0,5:5:6.02:110,6,0	1/1:4,8:13:0.42:254,0,0	1/1:1,6:7:15.05:274,15,0	1/1:2,21:25:45.15:823,45,0	0/0:20,1:21:5.23:0,5,771	1/1:3,17:19:30.10:545,30,0	0/0:19,0:19:57.19:0,57,834
chr10	63534851	.	ATGTGTGTGTG	A	4310.95	PASS	AC=22;AF=0.440;AN=50;BaseQRankSum=4.165;DP=491;FS=6.743;HRun=0;HaplotypeScore=146.8570;InbreedingCoeff=0.8363;MQ=54.32;MQ0=7;MQRankSum=-8.524;QD=26.78;ReadPosRankSum=3.083;VQSLOD=4.0055;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:32:48.16:0,48,1372	0/0:6,0:8:12.04:0,12,454	./.	0/0:29,0:24:12:0,12,159	0/0:17,0:23:12.04:0,12,315	1/1:5,12:18:24.08:700,24,0	1/1:9,6:16:17.79:475,18,0	0/0:36,0:35:39.13:0,39,1392	0/0:10,0:14:27.09:0,27,1030	./.	1/1:5,4:9:3.48:91,3,0	1/1:8,5:13:12.04:360,12,0	0/0:13,0:12:12.04:0,12,473	1/1:7,3:10:6.02:180,6,0	1/1:20,10:30:26.73:810,27,0	1/1:10,6:17:21.07:610,21,0	0/0:26,0:36:58.44:0,58,2132	0/0:11,0:17:21.07:0,21,912	1/1:11,3:13:12.02:294,12,0	1/1:5,4:9:9.03:270,9,0	./.	0/0:13,0:13:5.99:0,6,150	0/0:11,0:14:6.02:0,6,210	0/0:16,0:16:6.02:0,6,269	1/1:6,2:9:6.02:160,6,0	0/0:10,0:12:15.04:0,15,499	1/1:12,4:16:12.04:360,12,0	0/0:11,0:15:9.03:0,9,328
chr10	63536511	.	C	CTTT	4368.35	PASS	AB=0.616;AC=45;AF=0.804;AN=56;BaseQRankSum=0.397;DP=510;FS=1.921;HRun=13;HaplotypeScore=103.4573;InbreedingCoeff=0.1960;MQ=74.34;MQ0=0;MQRankSum=-1.886;QD=8.97;ReadPosRankSum=0.357;VQSLOD=2.0289;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:11,0:31:32.64:89,0,33	1/1:1,2:13:29.86:254,30,0	0/0:13,0:14:11.11:0,11,81	0/0:7,0:9:9.55:0,10,84	0/1:8,0:25:23.10:82,0,23	1/1:0,1:15:26.92:236,27,0	1/1:2,2:16:23.74:225,24,0	1/1:6,0:21:24.46:160,24,0	1/1:4,0:19:18.62:169,19,0	0/1:11,1:23:0.79:256,0,1	1/1:3,0:22:16.40:344,16,0	1/1:4,1:22:22.19:193,22,0	1/1:7,0:16:10.49:54,10,0	1/1:4,1:21:18.22:170,18,0	1/1:6,1:21:32.94:325,33,0	1/1:3,1:18:38.40:340,38,0	1/1:4,0:19:21.50:82,21,0	0/1:4,0:12:23.09:23,0,48	0/1:8,0:13:16.04:137,0,16	1/1:5,0:18:26.68:239,27,0	1/1:1,0:11:17.93:137,18,0	0/1:4,0:21:28.67:29,0,41	0/1:8,0:30:4.52:59,0,5	1/1:0,0:5:4.98:11,5,0	1/1:5,0:22:35.36:306,35,0	1/1:10,0:24:28.98:162,29,0	1/1:5,1:21:29.23:255,29,0	1/1:1,0:8:6.73:31,7,0
chr10	63536843	.	T	TCA	3187.17	PASS	AB=0.806;AC=44;AF=0.786;AN=56;BaseQRankSum=2.028;DP=682;FS=4.023;HRun=0;HaplotypeScore=144.4837;InbreedingCoeff=0.3221;MQ=51.41;MQ0=11;MQRankSum=1.068;QD=5.53;ReadPosRankSum=0.829;VQSLOD=2.7854;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:28,38:68:8.57:1035,9,0	0/0:11,0:11:26.55:0,27,271	0/0:35,0:14:5.91:0,6,49	0/1:52,0:23:16.08:16,0,41	0/1:15,10:25:99:244,0,110	1/1:34,0:31:15.01:162,15,0	1/1:24,0:23:14.21:140,14,0	0/0:23,0:26:28.20:0,28,246	1/1:15,0:29:23.03:188,23,0	1/1:17,0:16:4.90:102,5,0	1/1:12,0:12:4.81:29,5,0	1/1:25,0:24:8.43:69,8,0	1/1:5,0:13:11.99:104,12,0	1/1:19,0:19:6.84:50,7,0	1/1:19,0:19:2.89:23,3,0	1/1:6,0:16:6:52,6,0	0/0:32,0:34:47.77:0,48,492	0/1:11,0:12:21.86:22,0,86	1/1:23,0:23:8.59:68,9,0	1/1:17,0:17:4.50:27,5,0	1/1:22,0:22:3.88:27,4,0	0/1:5,1:20:21.14:174,0,21	1/1:3,0:17:11.32:104,11,0	1/1:10,3:29:33.02:328,33,0	1/1:12,1:21:2.96:25,3,0	1/1:10,2:23:38.81:310,39,0	1/1:16,0:28:2.99:26,3,0	1/1:5,0:7:3:28,3,0
chr10	63537339	.	GA	G	894.98	PASS	AB=0.929;AC=5;AF=0.089;AN=56;BaseQRankSum=7.723;DP=510;FS=0.000;HRun=11;HaplotypeScore=48.8489;InbreedingCoeff=0.6079;MQ=58.03;MQ0=11;MQRankSum=0.740;QD=12.26;ReadPosRankSum=1.653;VQSLOD=2.9802;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,34:39:79.95:646,80,0	0/0:6,0:5:15.04:0,15,160	0/1:12,1:7:12.99:13,0,44	0/0:7,0:3:2.66:0,3,25	1/1:2,17:16:44.90:363,45,0	0/0:20,0:20:48.08:0,48,493	0/0:21,1:20:20.43:0,20,410	0/0:21,1:21:24.35:0,24,450	0/0:20,0:20:50.94:0,51,506	0/0:20,0:19:48.08:0,48,486	0/0:14,0:12:30.07:0,30,311	0/0:20,0:19:42.09:0,42,441	0/0:17,0:17:39.07:0,39,399	0/0:10,1:11:2.47:0,2,229	0/0:14,0:13:24.06:0,24,256	0/0:14,0:14:33:0,33,327	0/0:21,2:22:60.14:0,60,629	0/0:32,2:35:4.04:0,4,629	0/0:19,0:20:44.73:0,45,435	0/0:20,1:21:26.47:0,26,474	0/0:16,0:16:39.08:0,39,407	0/0:11,1:12:24.05:0,24,250	0/0:14,0:14:27.05:0,27,277	0/0:23,2:24:22.70:0,23,619	0/0:8,0:9:23.88:0,24,231	0/0:20,2:26:9.23:0,9,468	0/0:15,0:16:17.19:0,17,210	0/0:11,0:11:21.01:0,21,211
chr10	63538539	.	CTT	C	1922.29	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-0.118;DP=605;FS=1.130;HRun=2;HaplotypeScore=544.1267;InbreedingCoeff=0.9765;MQ=76.68;MQ0=1;MQRankSum=-1.947;QD=36.97;ReadPosRankSum=1.606;VQSLOD=-0.2449;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:26.26:0,26,692	1/1:0,19:19:52.53:856,53,0	0/0:25,0:25:59.93:0,60,1131	0/0:19,0:19:52.88:0,53,974	0/0:36,0:36:68.59:0,69,1393	0/0:26,0:26:75.20:0,75,1338	0/0:12,0:12:29.57:0,30,486	1/1:0,21:21:54.12:797,54,0	0/0:19,0:19:51:0,51,862	0/0:35,0:34:86.35:0,86,1773	0/0:21,0:21:52.08:0,52,877	0/0:22,0:22:66.16:0,66,1227	0/0:27,0:27:81.21:0,81,1585	0/0:25,0:25:69.14:0,69,1279	0/0:31,0:31:90.05:0,90,1531	0/0:27,0:27:81.28:0,81,1588	1/1:0,4:4:9.03:146,9,0	1/1:1,7:8:19.31:279,19,0	0/0:13,0:13:33.11:0,33,647	0/0:48,0:48:99:0,140,2313	0/0:10,0:10:27.09:0,27,522	0/0:28,0:28:73.33:0,73,1354	0/0:23,0:23:64.61:0,65,998	0/0:11,0:11:32.58:0,33,575	0/0:22,0:22:66.22:0,66,1280	0/0:23,0:22:58.67:0,59,1069	0/0:28,0:28:84.14:0,84,1578	0/0:5,0:5:15.01:0,15,263
chr10	63539651	.	AAC	A	253.99	PASS	AB=0.883;AC=24;AF=0.545;AN=44;BaseQRankSum=3.224;DP=431;FS=1.107;HRun=0;HaplotypeScore=68.9058;InbreedingCoeff=0.4119;MQ=78.02;MQ0=8;MQRankSum=-1.337;QD=1.26;ReadPosRankSum=1.356;VQSLOD=1.0721;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	1/1:4,0:6:2.84:14,3,0	./.	./.	1/1:12,0:16:2.84:14,3,0	0/0:8,0:10:6.01:0,6,68	0/1:21,1:21:34.05:34,0,65	./.	1/1:6,0:10:8.52:42,9,0	0/0:11,0:11:6.01:0,6,66	0/0:8,0:8:6.02:0,6,84	0/0:9,0:11:5.99:0,6,50	./.	0/0:11,0:11:8.86:0,9,127	1/1:11,3:14:3.01:32,3,0	0/0:17,0:17:8.98:0,9,74	1/1:11,0:13:2.84:14,3,0	1/1:13,0:15:5.68:28,6,0	1/1:11,0:13:2.84:14,3,0	1/1:7,1:8:3.01:32,3,0	1/1:21,0:21:2.74:12,3,0	1/1:13,4:16:3:32,3,0	./.	0/1:26,3:33:27.67:74,0,28	0/0:13,0:15:9.01:0,9,93	0/0:16,0:16:20.97:0,21,199	1/1:9,2:12:8.69:60,9,0	0/0:3,0:8:6.01:0,6,70
chr10	63540656	.	GA	G	6731.55	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-4.954;DP=608;FS=1.854;HRun=11;HaplotypeScore=86.3759;InbreedingCoeff=0.8840;MQ=78.46;MQ0=5;MQRankSum=-5.283;QD=12.04;ReadPosRankSum=4.920;VQSLOD=4.8340;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,21:26:58.94:474,59,0	1/1:0,14:14:38.96:320,39,0	0/0:28,0:25:27.78:0,28,286	0/0:18,0:15:5.12:0,5,138	1/1:6,24:31:58.91:474,59,0	1/1:1,0:32:59.07:171,59,0	1/1:4,1:18:27.43:95,27,0	1/1:3,18:21:53.90:439,54,0	1/1:3,16:19:15.96:338,16,0	1/1:4,0:29:46.76:136,47,0	1/1:3,1:21:33.54:113,34,0	1/1:3,0:16:22.40:65,22,0	1/1:5,20:25:35.42:422,35,0	1/1:0,1:11:21.33:78,21,0	1/1:2,1:27:45.77:148,46,0	1/1:2,0:24:42.78:124,43,0	1/1:1,22:23:53.93:443,54,0	1/1:3,22:26:67.96:548,68,0	1/1:6,0:23:32.58:93,33,0	1/1:0,1:27:49.83:160,50,0	1/1:0,0:12:22.41:65,22,0	1/1:2,12:14:32.95:271,33,0	1/1:1,21:22:59.93:493,60,0	1/1:5,19:24:53.93:443,54,0	1/1:2,0:15:26:74,26,0	1/1:6,25:32:76.93:621,77,0	1/1:2,0:17:24.44:71,24,0	1/1:2,3:6:8.02:55,8,0
chr10	63541735	.	T	TGG	2335.70	PASS	AB=0.618;AC=25;AF=0.446;AN=56;BaseQRankSum=12.251;DP=670;FS=2.745;HRun=8;HaplotypeScore=102.5436;InbreedingCoeff=0.9557;MQ=84.22;MQ0=0;MQRankSum=-2.282;QD=8.75;ReadPosRankSum=0.709;VQSLOD=0.4242;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,0:40:77.23:267,77,0	1/1:1,0:11:24.83:86,25,0	0/0:24,0:24:48.06:0,48,516	0/0:26,0:26:42.19:0,42,429	1/1:5,0:24:43:146,43,0	0/0:23,0:23:50.80:0,51,559	0/0:32,0:32:58.32:0,58,798	1/1:10,0:27:32.94:128,33,0	1/1:4,14:19:35.61:531,36,0	0/0:38,0:38:95.84:0,96,1044	0/0:24,0:24:69.17:0,69,760	0/0:22,0:22:60.16:0,60,668	1/1:4,0:23:14.48:121,14,0	0/0:18,0:18:48.08:0,48,514	0/0:37,0:37:93.24:0,93,1035	0/0:35,0:35:93.18:0,93,999	1/1:3,0:21:14.49:121,14,0	1/1:0,0:12:27.45:94,27,0	0/0:24,0:24:69.16:0,69,747	0/0:23,0:23:54.11:0,54,593	0/0:37,0:37:93.12:0,93,1019	1/1:5,0:20:33.81:118,34,0	1/1:2,0:23:49.91:172,50,0	1/1:1,0:19:39.90:138,40,0	0/0:19,0:19:51.12:0,51,568	0/1:8,13:21:0.39:393,0,0	0/0:21,0:21:63.07:0,63,664	1/1:0,6:7:17.55:247,18,0
chr10	63542378	.	CT	C	13273.83	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=4.690;DP=606;FS=1.455;HRun=3;HaplotypeScore=65.8620;InbreedingCoeff=0.9978;MQ=80.03;MQ0=0;MQRankSum=-2.865;QD=32.86;ReadPosRankSum=2.806;VQSLOD=5.2879;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:96.25:0,96,1336	0/0:13,0:13:39.13:0,39,562	0/0:22,0:22:56.71:0,57,710	0/0:23,0:23:25.28:0,25,645	0/0:23,0:23:66.22:0,66,949	1/1:1,16:17:45.14:558,45,0	1/1:1,29:30:78.25:967,78,0	0/0:40,0:40:99:0,114,1575	0/0:17,0:17:51.17:0,51,734	1/1:0,26:26:75.22:916,75,0	1/1:1,21:22:54.10:649,54,0	1/1:0,19:19:54.17:669,54,0	1/1:0,16:16:48.15:588,48,0	1/1:0,11:11:21.07:260,21,0	1/1:1,27:28:75.24:930,75,0	1/1:1,32:33:90.28:1116,90,0	0/0:20,0:19:51.17:0,51,728	0/0:7,0:7:21.07:0,21,302	1/1:0,7:7:21.07:260,21,0	1/1:0,19:19:48.15:595,48,0	1/1:2,28:30:72.23:893,72,0	1/1:2,22:24:54.13:648,54,0	1/1:0,19:19:54.17:668,54,0	1/1:1,20:21:54.17:667,54,0	1/1:1,18:19:48.15:595,48,0	1/1:0,31:31:93.27:1137,93,0	1/1:1,19:20:60.17:728,60,0	1/1:0,12:12:36.07:429,36,0
chr10	63543320	.	T	TA	10269.12	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-14.361;DP=624;FS=0.339;HRun=9;HaplotypeScore=68.3959;InbreedingCoeff=0.9467;MQ=73.51;MQ0=0;MQRankSum=-0.598;QD=24.86;ReadPosRankSum=0.050;VQSLOD=5.4231;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:2,0:21:34.63:0,35,102	1/1:1,11:12:33.02:350,33,0	0/0:15,1:16:26.09:0,26,230	0/0:16,0:16:10.88:0,11,196	0/0:1,0:34:63.26:0,63,198	1/1:2,20:22:51.14:564,51,0	1/1:3,22:25:57.15:631,57,0	1/1:14,30:44:88.09:943,88,0	1/1:5,18:23:45.12:498,45,0	1/1:6,31:38:60.97:864,61,0	1/1:4,15:19:36.14:456,36,0	1/1:1,15:16:35.93:379,36,0	0/0:20,0:20:44.18:0,44,371	1/1:3,20:23:37.11:635,37,0	1/1:2,18:20:51.14:564,51,0	1/1:3,16:19:45.09:485,45,0	1/1:3,16:19:48.13:531,48,0	1/1:2,19:21:51.14:564,51,0	1/1:6,18:24:31.09:563,31,0	1/1:3,26:29:78.04:818,78,0	1/1:0,7:7:18.05:199,18,0	0/0:30,1:31:50.87:0,51,670	0/0:18,0:18:47.89:0,48,399	0/0:13,0:13:35.99:0,36,313	1/1:5,19:24:1.98:462,2,0	0/0:35,2:37:26.57:0,27,681	1/1:5,23:28:69.19:763,69,0	0/0:4,0:4:5.98:0,6,52
chr10	63544075	.	G	GCTGT	17854.22	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-13.422;DP=454;FS=23.272;HRun=0;HaplotypeScore=68.7506;InbreedingCoeff=0.9375;MQ=80.19;MQ0=0;MQRankSum=-2.811;QD=61.78;ReadPosRankSum=5.387;VQSLOD=4.2027;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:63.22:0,63,1231	0/0:10,0:10:30.10:0,30,599	0/0:16,0:16:40.32:0,40,810	0/0:11,0:11:30.05:0,30,506	0/0:20,0:20:57.20:0,57,1135	1/1:1,4:6:3.01:83,3,0	1/1:1,9:11:15.05:418,15,0	0/0:27,0:27:78.23:0,78,1507	0/0:17,0:17:51.18:0,51,1017	1/1:2,20:25:69.23:1870,69,0	1/1:0,4:4:12.04:335,12,0	1/1:0,11:12:30.10:837,30,0	1/1:3,12:15:39.13:1045,39,0	1/1:3,17:20:33.11:921,33,0	1/1:1,17:19:42.14:1174,42,0	1/1:0,12:12:33.11:922,33,0	0/0:26,0:26:75.26:0,75,1491	0/0:15,0:15:42.12:0,42,801	1/1:5,11:19:51.17:1260,51,0	1/1:0,12:12:30.10:839,30,0	1/1:4,15:19:32.96:915,33,0	1/1:4,17:21:42.14:1173,42,0	1/1:1,9:11:17.46:503,17,0	1/1:0,2:2:3.01:83,3,0	1/1:1,10:12:30.10:815,30,0	1/1:1,15:18:48.16:1307,48,0	1/1:4,24:30:72.25:2012,72,0	1/1:0,18:20:48.16:1342,48,0
chr10	63544132	.	A	ATATT	1503.89	PASS	AB=1.000;AC=10;AF=0.185;AN=54;BaseQRankSum=-3.998;DP=229;FS=17.610;HRun=0;HaplotypeScore=64.0788;InbreedingCoeff=0.5153;MQ=62.46;MQ0=2;MQRankSum=-2.235;QD=20.60;ReadPosRankSum=0.113;VQSLOD=1.7756;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:15,0:15:2.59:3,0,418	1/1:6,1:7:3.01:72,3,0	0/0:2,0:2:3:0,3,26	0/0:6,0:4:5.91:0,6,65	0/0:14,0:13:24.08:0,24,398	0/0:7,0:6:8.58:0,9,149	0/0:6,0:6:12.04:0,12,185	1/1:15,0:15:9.03:217,9,0	0/0:7,0:7:9.03:0,9,149	0/0:9,0:9:12.04:0,12,199	0/0:6,0:5:3.01:0,3,50	0/0:4,0:4:6.02:0,6,99	0/0:6,0:5:6.02:0,6,99	0/0:4,0:4:3.01:0,3,50	0/0:11,0:11:21.07:0,21,348	0/0:5,0:5:12.04:0,12,199	1/1:5,11:16:33.10:761,33,0	1/1:6,8:14:24.08:590,24,0	0/0:11,0:10:24.08:0,24,397	0/0:5,0:5:9.03:0,9,149	0/0:5,0:5:3.01:0,3,50	0/0:2,0:2:3.01:0,3,50	0/1:6,0:6:0:0,0,0	./.	0/0:8,0:8:6.02:0,6,86	0/0:9,0:9:15.05:0,15,249	0/0:13,0:13:9.03:0,9,149	0/0:16,0:16:15.05:0,15,249
chr10	63544617	.	CCAAACAAACAAA	C	14938.72	PASS	AB=0.642;AC=41;AF=0.732;AN=56;BaseQRankSum=4.415;DP=575;FS=7.223;HRun=0;HaplotypeScore=218.5020;InbreedingCoeff=0.3836;MQ=49.08;MQ0=1;MQRankSum=-6.134;QD=32.27;ReadPosRankSum=3.557;VQSLOD=3.2539;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:17,0:28:0.87:1,0,152	1/1:3,0:8:3.06:7,3,0	0/0:32,0:23:37.37:0,37,1400	0/0:27,0:19:6.02:0,6,246	0/1:6,0:22:7.41:7,0,93	1/1:8,8:16:12.04:417,12,0	1/1:7,9:16:21.07:729,21,0	0/1:19,0:30:2.27:2,0,100	0/0:10,0:23:15.05:0,15,670	1/1:8,18:26:45.13:1423,45,0	1/1:5,12:17:30.10:1041,30,0	1/1:7,14:21:36.12:1250,36,0	1/1:4,15:19:36.12:1250,36,0	1/1:13,21:34:45.15:1563,45,0	1/1:8,12:20:24.08:833,24,0	0/1:7,14:23:99:1191,0,118	0/0:20,0:30:5.16:0,5,216	0/1:7,0:13:7.60:8,0,52	1/1:18,6:24:18.06:625,18,0	1/1:7,10:17:14.09:535,14,0	1/1:11,8:19:9.03:312,9,0	1/1:6,8:14:24.08:832,24,0	1/1:8,7:15:7.85:310,8,0	1/1:7,8:15:12.04:417,12,0	0/1:1,6:7:99:503,0,115	0/1:13,2:30:99:210,0,218	1/1:8,15:23:42.14:1459,42,0	1/1:1,0:6:5.60:14,6,0
chr10	63544916	.	CA	C	4346.95	PASS	AB=0.556;AC=32;AF=0.571;AN=56;BaseQRankSum=0.540;DP=461;FS=8.408;HRun=10;HaplotypeScore=77.4159;InbreedingCoeff=0.8419;MQ=58.39;MQ0=12;MQRankSum=4.149;QD=17.67;ReadPosRankSum=3.459;VQSLOD=5.2614;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:25:43.18:0,43,229	0/0:5,0:5:12.03:0,12,133	0/0:19,2:8:17.64:0,18,168	0/0:15,0:8:13.28:0,13,136	0/0:5,0:24:50.61:0,51,268	1/1:4,15:19:44.98:391,45,0	1/1:1,5:6:12:104,12,0	0/0:30,0:31:66.07:0,66,684	0/0:4,0:10:14.34:0,14,77	1/1:3,15:19:50.02:420,50,0	1/1:6,17:23:47.71:416,48,0	1/1:3,8:11:17.98:156,18,0	0/1:3,12:15:6.19:181,0,6	1/1:3,5:8:8.98:78,9,0	0/1:3,12:14:6.20:181,0,6	1/1:4,19:23:41.96:365,42,0	0/0:23,0:23:66.18:0,66,727	0/0:26,0:23:60.16:0,60,664	1/1:3,12:15:35.98:309,36,0	1/1:3,12:15:32.97:286,33,0	1/1:1,11:12:29.99:260,30,0	1/1:2,5:7:11.99:104,12,0	1/1:1,11:12:26.99:234,27,0	1/1:2,9:11:26.99:234,27,0	1/1:4,12:16:29.99:260,30,0	0/0:20,2:22:8.05:0,8,536	1/1:5,14:19:41.99:365,42,0	0/0:13,0:13:36.10:0,36,398
chr10	63545054	.	A	ATTTT	6140.10	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=13.613;DP=432;FS=0.000;HRun=0;HaplotypeScore=119.9545;InbreedingCoeff=0.9772;MQ=73.02;MQ0=0;MQRankSum=-12.804;QD=73.10;ReadPosRankSum=-0.497;VQSLOD=6.1585;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:66.18:0,66,1304	1/1:0,3:3:9.03:260,9,0	0/0:15,0:15:42.14:0,42,844	0/0:3,0:3:9.03:0,9,150	0/0:16,0:16:48.13:0,48,914	0/0:19,0:19:54.19:0,54,1100	0/0:9,0:9:24.08:0,24,503	1/1:4,15:21:62.97:1453,63,0	1/1:2,8:10:29.93:728,30,0	0/0:17,0:17:45.15:0,45,908	0/0:22,0:22:63.22:0,63,1321	0/0:12,0:12:36.08:0,36,712	0/0:16,0:16:48.16:0,48,1007	0/0:15,0:15:42.13:0,42,819	0/0:11,0:11:30.10:0,30,615	0/0:20,0:20:60.21:0,60,1258	1/1:2,7:9:26.93:547,27,0	1/1:1,6:7:21.07:558,21,0	0/0:14,0:14:39.11:0,39,724	0/0:28,0:28:75.17:0,75,1463	0/0:27,0:27:81.26:0,81,1661	0/0:12,0:12:36.12:0,36,743	0/0:15,0:15:45.15:0,45,932	0/0:17,0:17:51.18:0,51,1070	0/0:15,0:15:45.15:0,45,944	1/1:5,17:22:60.40:1554,60,0	0/0:22,0:22:66.23:0,66,1383	1/1:0,12:12:36.12:1041,36,0
chr10	63545058	.	A	AAT	4177.70	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=13.698;DP=424;FS=0.460;HRun=0;HaplotypeScore=107.0725;InbreedingCoeff=0.9680;MQ=71.16;MQ0=0;MQRankSum=-12.987;QD=50.33;ReadPosRankSum=-0.231;VQSLOD=3.8045;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:60.20:0,60,961	1/1:0,3:3:9.03:178,9,0	0/0:13,0:13:35.99:0,36,533	0/0:2,0:2:6.02:0,6,98	0/0:13,0:13:39.13:0,39,636	0/0:17,0:17:51.17:0,51,832	0/0:8,0:8:24.08:0,24,392	1/1:4,15:19:55.82:952,56,0	1/1:3,8:11:32.90:543,33,0	0/0:17,0:17:51.17:0,51,832	0/0:21,0:21:60.20:0,60,978	0/0:13,0:13:33.11:0,33,538	0/0:19,0:19:51.17:0,51,827	0/0:13,0:13:39.13:0,39,636	0/0:12,0:12:33.10:0,33,514	0/0:20,0:20:60.19:0,60,949	1/1:4,7:11:23.35:346,23,0	1/1:0,6:6:18.06:364,18,0	0/0:14,0:14:42.09:0,42,633	0/0:28,0:28:72.19:0,72,1111	0/0:28,0:28:84.29:0,84,1360	0/0:12,0:12:36.12:0,36,587	0/0:15,0:15:45.15:0,45,734	0/0:17,0:17:51.17:0,51,832	0/0:15,0:15:45.15:0,45,734	1/1:4,17:21:53.64:1069,54,0	0/0:23,0:23:69.20:0,69,1069	1/1:0,12:12:36.12:725,36,0
chr10	63545388	.	G	GA	9386.14	PASS	AB=0.710;AC=33;AF=0.589;AN=56;BaseQRankSum=5.195;DP=571;FS=0.350;HRun=9;HaplotypeScore=86.7028;InbreedingCoeff=0.8155;MQ=71.94;MQ0=0;MQRankSum=1.061;QD=24.13;ReadPosRankSum=3.762;VQSLOD=5.2926;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:32.99:0,33,286	0/1:9,1:10:1.70:2,0,204	0/0:12,1:11:1.52:0,2,92	0/0:18,0:18:31.26:0,31,250	0/0:22,0:22:65.99:0,66,573	1/1:4,16:21:18.27:466,18,0	1/1:0,13:14:29.14:359,29,0	0/0:27,0:27:65.95:0,66,569	0/0:24,0:24:56.96:0,57,491	1/1:3,21:25:56.19:640,56,0	1/1:5,23:29:54.94:796,55,0	1/1:5,20:26:39.98:645,40,0	1/1:2,10:12:21.06:232,21,0	0/1:5,5:10:1.98:203,0,2	0/1:6,22:30:6.31:587,0,6	1/1:4,19:24:47.96:512,48,0	0/0:16,0:16:38.99:0,39,339	0/0:16,0:15:44.99:0,45,391	1/1:5,17:22:48.12:523,48,0	1/1:4,27:32:58:851,58,0	1/1:2,10:11:27.07:299,27,0	1/1:1,12:13:36.10:398,36,0	1/1:4,21:25:60.16:664,60,0	1/1:1,23:24:63.17:697,63,0	1/1:5,21:26:31.10:571,31,0	0/0:25,1:26:23.85:0,24,436	1/1:6,27:34:67.01:941,67,0	0/0:6,0:6:18:0,18,156
chr10	63545483	.	T	TC	6442.78	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=0.255;DP=429;FS=0.000;HRun=1;HaplotypeScore=93.8082;InbreedingCoeff=0.9046;MQ=83.44;MQ0=0;MQRankSum=-2.825;QD=22.77;ReadPosRankSum=1.155;VQSLOD=4.7895;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,6:13:20.02:251,20,0	1/1:3,5:8:2.22:130,2,0	0/0:19,0:19:53.96:0,54,654	0/0:14,0:14:40.68:0,41,489	1/1:6,12:18:39.05:472,39,0	1/1:4,8:12:14.73:296,15,0	1/1:6,15:21:24.09:410,24,0	1/1:10,17:27:25.42:285,25,0	0/0:18,0:18:6.09:0,6,156	1/1:10,11:21:26.96:410,27,0	1/1:6,14:20:54.13:627,54,0	1/1:4,8:12:30.08:350,30,0	0/0:15,0:15:41.54:0,42,230	1/1:1,8:9:21.06:252,21,0	1/1:9,10:19:25.76:505,26,0	1/1:6,2:8:9.02:107,9,0	1/1:4,10:14:26.53:294,27,0	1/1:0,5:4:15.05:178,15,0	1/1:1,5:6:15.02:179,15,0	1/1:9,10:19:26.83:460,27,0	1/1:5,9:14:9.59:333,10,0	0/0:15,0:15:9.32:0,9,177	0/0:17,0:17:33.09:0,33,217	0/0:9,0:9:22.86:0,23,119	1/1:5,8:13:24.05:284,24,0	0/0:14,1:15:7.59:0,8,148	1/1:1,23:24:53.10:619,53,0	0/0:24,0:24:61.80:0,62,335
chr10	63545575	.	AT	A	1102.16	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.765;DP=536;FS=0.601;HRun=7;HaplotypeScore=62.3865;InbreedingCoeff=0.9948;MQ=69.22;MQ0=0;MQRankSum=-1.914;QD=23.45;ReadPosRankSum=1.103;VQSLOD=3.7685;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,16:16:42.10:428,42,0	0/0:10,0:10:30.08:0,30,364	0/0:16,0:13:23.79:0,24,295	0/0:15,0:16:24.08:0,24,345	1/1:5,26:31:78.17:795,78,0	0/0:20,0:20:60.19:0,60,753	0/0:23,0:23:66.21:0,66,830	0/0:37,0:37:96.29:0,96,1184	0/0:16,0:16:48.14:0,48,592	0/0:24,0:24:66.20:0,66,811	0/0:30,0:30:84.21:0,84,1025	0/0:19,0:19:57.18:0,57,717	0/0:10,0:10:21.07:0,21,264	0/0:16,0:16:48.12:0,48,567	0/0:19,0:19:36.12:0,36,453	0/0:17,0:17:51.16:0,51,641	0/0:19,0:19:54.17:0,54,679	0/0:9,0:9:27.09:0,27,335	0/0:17,0:17:45.11:0,45,530	0/0:25,0:25:69.21:0,69,854	0/0:19,0:19:57.18:0,57,717	0/0:12,0:12:36.12:0,36,453	0/0:14,0:14:42.11:0,42,502	0/0:17,0:17:45.09:0,45,534	0/0:17,0:17:51.16:0,51,631	0/0:20,0:20:60.18:0,60,734	0/0:29,0:29:81.24:0,81,999	0/0:18,0:18:51.15:0,51,626
chr10	63546225	.	CAG	C	2696.20	PASS	AB=0.966;AC=36;AF=0.643;AN=56;BaseQRankSum=0.473;DP=757;FS=4.441;HRun=0;HaplotypeScore=156.0578;InbreedingCoeff=0.3289;MQ=42.10;MQ0=48;MQRankSum=2.606;QD=4.77;ReadPosRankSum=0.550;VQSLOD=2.7106;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:22.12:0,22,169	0/1:9,0:8:34.44:34,0,87	0/0:65,0:14:29.14:0,29,448	0/1:89,0:17:3.23:3,0,107	0/0:27,0:27:13.75:0,14,81	1/1:15,0:15:6.71:51,7,0	1/1:24,0:23:14.37:119,14,0	0/1:31,0:30:68.85:69,0,342	0/1:22,0:21:24.32:24,0,36	1/1:24,0:23:32.31:314,32,0	1/1:11,1:11:8.51:65,9,0	1/1:17,0:17:32.33:237,32,0	0/1:19,0:18:18.91:127,0,19	1/1:30,3:31:29.66:240,30,0	1/1:30,4:34:22.53:200,23,0	0/1:21,3:24:51.57:116,0,52	0/0:22,0:22:12:0,12,140	0/0:17,0:17:8.94:0,9,74	1/1:24,1:23:54.14:371,54,0	1/1:20,0:18:14.82:118,15,0	1/1:46,0:44:26.88:223,27,0	1/1:17,0:17:26.75:205,27,0	1/1:13,0:13:5.90:41,6,0	1/1:24,1:24:16.92:110,17,0	1/1:13,0:13:9.11:98,9,0	0/1:32,0:30:9.12:9,0,504	0/1:17,4:21:9.54:109,0,10	0/0:12,0:11:3:0,3,29
chr10	63546227	.	GAC	G	479.39	PASS	AB=0.946;AC=21;AF=0.375;AN=56;BaseQRankSum=1.557;DP=772;FS=4.573;HRun=0;HaplotypeScore=165.9868;InbreedingCoeff=0.0681;MQ=41.98;MQ0=48;MQRankSum=2.322;QD=1.29;ReadPosRankSum=0.423;VQSLOD=2.2283;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:48,0:48:7.21:7,0,15	0/0:9,0:8:7.51:0,8,59	0/0:64,0:13:31:0,31,306	0/0:91,0:17:14.83:0,15,168	0/1:27,0:27:0.26:1,0,0	0/0:16,1:17:7.73:0,8,51	1/1:20,4:23:1.34:5,1,0	0/0:33,0:31:12.20:0,12,67	0/1:22,0:21:12.35:64,0,12	0/1:23,1:23:41.90:90,0,42	1/1:10,1:10:4.50:44,4,0	0/1:15,2:17:2.28:110,0,2	0/0:20,0:19:16.34:0,16,157	0/1:31,2:31:11.45:11,0,47	0/1:33,3:36:9.30:40,0,9	0/0:21,3:24:17.66:0,18,193	0/0:10,0:27:10.65:0,11,65	0/0:4,0:21:3:0,3,27	0/1:18,6:22:21.95:186,0,22	1/1:16,3:17:4.34:27,4,0	0/0:44,4:46:0.43:0,0,40	1/1:17,0:17:0.50:11,0,0	1/1:12,0:12:2.60:10,3,0	0/1:25,0:24:14.07:14,0,14	0/1:12,0:12:0.48:0,0,16	0/0:31,1:30:7.99:0,8,274	0/1:19,3:22:0.22:0,0,90	0/0:1,0:11:3:0,3,26
chr10	63546229	.	C	CACACAG	843.14	PASS	AB=0.998;AC=17;AF=0.304;AN=56;BaseQRankSum=3.221;DP=784;FS=11.432;HRun=0;HaplotypeScore=197.1544;InbreedingCoeff=-0.0229;MQ=41.75;MQ0=51;MQRankSum=-2.860;QD=2.93;ReadPosRankSum=-1.941;VQSLOD=0.9127;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:48:14.36:0,14,107	0/1:10,0:9:55.79:65,0,56	0/0:67,0:14:33.14:0,33,420	0/0:92,0:14:11.80:0,12,191	0/0:28,0:27:9.60:0,10,53	0/0:17,0:17:8.67:0,9,72	0/0:25,0:24:9.41:0,9,69	0/0:34,0:32:22.16:0,22,224	1/1:5,17:22:6.91:154,7,0	0/1:27,0:26:99:134,0,99	0/1:12,0:11:15.66:43,0,16	0/1:17,0:17:34.72:35,0,76	0/0:19,0:18:22.53:0,23,142	0/0:33,0:31:15.25:0,15,126	0/1:36,0:37:5.08:5,0,89	0/1:24,0:24:42.32:42,0,97	0/1:27,0:27:41.10:41,0,45	0/1:20,0:20:11.05:87,0,11	0/1:26,0:23:62.56:277,0,63	1/1:19,0:17:4.08:17,4,0	0/0:48,0:46:24.73:0,25,184	0/0:18,0:18:13.27:0,13,96	0/1:13,0:13:4.65:5,0,18	0/0:25,0:24:12.78:0,13,58	0/0:12,0:12:6.22:0,6,41	0/0:29,0:27:21.97:0,22,313	0/1:21,0:21:37.86:38,0,51	1/1:12,0:11:3.01:59,3,0
chr10	63546231	.	CACACAG	C	3019.90	PASS	AB=0.997;AC=38;AF=0.679;AN=56;BaseQRankSum=-5.200;DP=790;FS=4.293;HRun=0;HaplotypeScore=182.3678;InbreedingCoeff=-0.1550;MQ=40.63;MQ0=51;MQRankSum=4.469;QD=4.26;ReadPosRankSum=-3.195;VQSLOD=2.0019;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:8,39:47:12.78:138,13,0	0/1:10,0:9:2.48:65,0,2	0/0:67,0:14:18.11:0,18,134	0/1:92,0:12:5.84:6,0,111	1/1:2,26:27:10.23:104,10,0	0/1:17,0:17:40.11:42,0,40	1/1:25,0:24:9.98:97,10,0	1/1:34,0:32:37.47:331,37,0	0/1:21,0:21:4.57:5,0,47	0/1:27,0:26:99:287,0,121	1/1:12,0:11:12.01:139,12,0	1/1:18,0:18:9.80:221,10,0	0/1:21,0:20:99:181,0,117	0/1:33,0:31:14.10:221,0,14	0/1:37,0:37:1.14:121,0,1	0/1:25,0:25:29.12:29,0,377	1/1:27,0:27:6.62:75,7,0	0/1:20,0:20:14.08:14,0,52	0/1:27,0:24:91.26:369,0,91	1/1:19,0:17:2.58:68,3,0	1/1:50,0:48:20.86:143,21,0	1/1:18,0:18:20.36:223,20,0	1/1:13,0:13:6.41:44,6,0	0/1:25,0:24:13.37:66,0,13	1/1:13,0:13:3.67:26,4,0	0/1:29,0:27:99:105,0,393	0/1:20,0:20:60.48:60,0,85	0/0:12,0:11:3.01:0,3,60
chr10	63546235	.	CAG	C	3797.71	PASS	AB=0.965;AC=46;AF=0.821;AN=56;BaseQRankSum=-4.018;DP=781;FS=2.923;HRun=0;HaplotypeScore=160.6474;InbreedingCoeff=0.0977;MQ=40.97;MQ0=51;MQRankSum=4.795;QD=5.37;ReadPosRankSum=-1.384;VQSLOD=3.1177;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:44,0:44:7.37:53,7,0	1/1:10,0:9:8.05:101,8,0	0/0:62,0:13:13.39:0,13,130	0/1:89,0:12:11.89:12,0,111	1/1:27,0:26:8.53:52,9,0	1/1:18,0:18:2.97:45,3,0	1/1:25,0:24:14.37:119,14,0	1/1:33,0:31:80.51:572,81,0	0/1:22,0:21:7.86:75,0,8	1/1:28,2:29:22.48:351,22,0	1/1:12,1:12:13.72:94,14,0	1/1:18,0:18:18.99:219,19,0	0/1:20,1:20:14.33:154,0,14	1/1:33,0:31:31.77:260,32,0	1/1:35,2:37:16.52:137,17,0	0/1:24,1:25:58.61:59,0,139	1/1:29,0:29:16.81:127,17,0	1/1:19,0:19:3.69:36,4,0	0/1:27,1:25:33.74:204,0,34	1/1:17,0:15:11.17:71,11,0	1/1:50,0:48:28.47:197,28,0	1/1:20,0:20:32.88:275,33,0	1/1:14,0:14:11.96:100,12,0	1/1:22,3:24:18.86:161,19,0	1/1:13,0:13:5.16:56,5,0	1/1:27,0:25:1.32:213,1,0	0/1:18,2:20:48.85:55,0,49	0/0:12,0:11:2.22:0,2,7
chr10	63546241	.	C	CACAG	1779.86	PASS	AB=0.949;AC=18;AF=0.321;AN=56;BaseQRankSum=0.172;DP=800;FS=28.772;HRun=0;HaplotypeScore=198.9537;InbreedingCoeff=-0.2911;MQ=40.97;MQ0=47;MQRankSum=-0.359;QD=4.39;ReadPosRankSum=0.955;VQSLOD=1.3726;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:1.74:0,2,100	0/0:10,0:9:16.22:0,16,133	0/0:58,0:14:24:0,24,244	0/0:80,0:11:26.82:0,27,256	0/0:28,0:27:9.21:0,9,53	0/1:22,0:22:6.73:7,0,67	0/1:24,3:26:32.03:32,0,92	0/0:35,0:33:31.66:0,32,459	0/1:21,0:20:14.20:14,0,46	0/1:33,0:32:99:297,0,102	0/1:12,0:11:33.05:157,0,33	0/1:19,0:19:99:146,0,122	0/0:24,0:23:31.44:0,31,211	0/1:29,2:29:33.93:34,0,99	0/1:35,2:37:18.93:19,0,93	0/1:23,2:25:80.98:285,0,81	0/0:30,0:30:24.60:0,25,176	0/1:19,0:19:19.55:20,0,35	0/1:27,2:26:99:460,0,125	0/1:14,3:15:16.07:59,0,16	0/1:49,1:48:90.38:90,0,120	0/0:25,0:25:10.25:0,10,211	0/1:13,0:13:0.32:0,0,43	0/0:28,0:27:15.35:0,15,124	0/1:14,0:14:26:34,0,26	0/0:29,0:27:47.36:0,47,437	0/1:13,7:23:1.02:246,0,1	1/1:13,0:12:3.01:33,3,0
chr10	63546253	.	CACAA	C	4329.15	PASS	AB=0.932;AC=30;AF=0.536;AN=56;BaseQRankSum=-1.147;DP=789;FS=2.940;HRun=0;HaplotypeScore=171.1292;InbreedingCoeff=0.2287;MQ=44.09;MQ0=37;MQRankSum=0.750;QD=8.15;ReadPosRankSum=-0.387;VQSLOD=4.3035;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:34.17:0,34,354	0/1:11,0:10:11.86:12,0,193	0/0:50,0:15:25.08:0,25,421	0/1:67,0:15:7.60:8,0,281	0/0:30,0:29:42.15:0,42,310	0/1:21,0:21:15.99:67,0,16	1/1:26,4:29:32.47:316,32,0	0/0:37,0:35:8.66:0,9,643	0/0:21,0:20:9.34:0,9,193	1/1:9,22:30:17.24:540,17,0	1/1:15,1:14:23.99:287,24,0	0/1:15,2:18:5.52:265,0,6	0/1:22,0:21:18.12:237,0,18	1/1:28,2:28:0.20:260,0,0	1/1:12,23:35:1.90:67,2,0	0/1:22,4:26:99:140,0,149	0/0:32,0:32:3.13:0,3,434	0/0:23,0:23:28.47:0,28,304	0/1:18,4:20:22.70:412,0,23	0/1:15,3:16:2.12:141,0,2	1/1:43,6:45:37.15:393,37,0	1/1:23,0:23:35.97:352,36,0	1/1:14,0:14:15.01:176,15,0	1/1:30,0:30:13.49:309,13,0	1/1:15,1:16:11.61:127,12,0	0/1:29,0:27:35.02:35,0,641	0/1:18,4:22:21.21:186,0,21	0/0:19,0:18:20.85:0,21,214
chr10	63546255	.	CAA	C	3723.09	PASS	AB=0.988;AC=37;AF=0.661;AN=56;BaseQRankSum=1.379;DP=786;FS=7.866;HRun=3;HaplotypeScore=159.8288;InbreedingCoeff=0.4036;MQ=45.44;MQ0=34;MQRankSum=0.023;QD=6.38;ReadPosRankSum=0.755;VQSLOD=-0.1898;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:41.44:0,41,338	0/1:11,0:10:11.89:12,0,187	0/0:52,0:18:30.09:0,30,432	0/1:66,0:17:10.74:11,0,293	0/0:29,0:28:43.05:0,43,312	1/1:21,0:21:15.60:111,16,0	1/1:29,0:28:32.35:261,32,0	0/1:36,0:34:3.40:3,0,510	0/1:21,0:20:16.10:16,0,147	1/1:31,0:30:60.73:431,61,0	1/1:16,0:14:23.60:188,24,0	1/1:18,0:18:31.28:212,31,0	0/1:20,2:21:10.53:210,0,11	1/1:31,0:29:37.47:303,37,0	1/1:35,0:35:1.91:36,2,0	0/1:25,0:25:37.40:97,0,37	0/0:31,0:31:3.60:0,4,433	0/0:23,0:23:27.21:0,27,258	1/1:21,0:19:33.53:266,34,0	1/1:18,0:16:20.30:152,20,0	1/1:46,0:42:39.69:297,40,0	1/1:23,0:23:47.92:399,48,0	1/1:15,0:15:17.46:144,17,0	1/1:30,2:31:40.61:332,41,0	1/1:16,0:16:5.80:84,6,0	0/1:30,0:29:60.47:60,0,418	1/1:21,0:21:4.80:97,5,0	0/0:19,0:18:20.82:0,21,187
chr10	63546867	.	T	TA	1160.82	PASS	AB=0.696;AC=8;AF=0.143;AN=56;BaseQRankSum=-1.061;DP=530;FS=15.422;HRun=10;HaplotypeScore=77.1165;InbreedingCoeff=0.6849;MQ=72.59;MQ0=0;MQRankSum=-0.428;QD=17.86;ReadPosRankSum=-0.004;VQSLOD=2.7627;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:35:97.91:0,98,794	0/0:7,0:8:23.01:0,23,178	0/0:6,0:7:8.92:0,9,66	0/0:14,0:14:15.65:0,16,127	0/0:20,0:21:46.96:0,47,375	0/0:15,1:17:42.14:0,42,330	0/0:9,0:9:20.96:0,21,170	0/0:36,0:34:64.65:0,65,520	0/0:19,2:21:24.94:0,25,411	0/0:23,0:23:59.93:0,60,493	0/0:23,0:23:57.40:0,57,469	0/0:14,0:15:40.99:0,41,326	1/1:1,19:20:42.08:438,42,0	0/0:15,0:15:32.94:0,33,271	0/0:16,0:17:40.97:0,41,323	0/0:20,0:20:44.93:0,45,369	0/0:34,0:34:69.22:0,69,736	0/0:20,0:20:56.89:0,57,463	0/0:19,0:19:47.92:0,48,394	0/0:19,0:20:43.46:0,43,350	0/0:14,0:13:29.96:0,30,246	1/1:3,10:13:5.43:263,5,0	0/1:4,5:9:6.60:142,0,7	1/1:1,16:17:42.11:447,42,0	0/0:23,0:24:55.95:0,56,449	0/0:24,0:26:60.96:0,61,477	0/0:26,0:26:65.88:0,66,539	0/1:4,2:6:17:17,0,84
chr10	63547061	.	T	TA	7654.76	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=6.311;DP=527;FS=11.885;HRun=8;HaplotypeScore=73.4479;InbreedingCoeff=0.9697;MQ=66.30;MQ0=0;MQRankSum=1.983;QD=26.40;ReadPosRankSum=1.960;VQSLOD=4.9456;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:69.03:0,69,630	0/0:10,0:10:21.01:0,21,192	0/0:12,0:7:8.98:0,9,78	0/0:8,0:4:5.74:0,6,40	0/0:29,0:29:81.02:0,81,736	1/1:3,15:17:39.12:450,39,0	1/1:0,14:14:33.10:381,33,0	0/0:44,0:42:88.73:0,89,893	0/0:14,0:14:36:0,36,325	1/1:8,21:29:66.08:734,66,0	1/1:0,20:20:57:607,57,0	1/1:1,14:15:33.10:381,33,0	1/1:5,15:20:20.68:486,21,0	1/1:1,16:17:42.12:485,42,0	1/1:1,18:19:42.12:485,42,0	1/1:0,20:20:48.14:554,48,0	0/0:26,0:26:69.01:0,69,624	0/0:31,0:31:81.01:0,81,733	1/1:4,16:20:26.69:560,27,0	1/1:2,19:21:44.90:643,45,0	1/1:0,12:12:30.09:346,30,0	1/1:2,5:7:14.96:152,15,0	1/1:1,8:9:24.07:277,24,0	1/1:1,8:9:21.06:242,21,0	1/1:3,10:13:30.09:346,30,0	0/0:18,1:19:19.41:0,19,432	1/1:5,22:27:23.69:527,24,0	0/0:18,0:18:54.03:0,54,494
chr10	63547173	.	GA	G	6953.73	PASS	AB=0.913;AC=50;AF=0.893;AN=56;BaseQRankSum=0.610;DP=458;FS=3.667;HRun=11;HaplotypeScore=55.2997;InbreedingCoeff=0.6107;MQ=78.26;MQ0=0;MQRankSum=-0.199;QD=16.88;ReadPosRankSum=3.852;VQSLOD=5.8085;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,1:26:38.03:0,38,556	1/1:2,6:9:20.01:154,20,0	0/1:14,1:11:9.63:10,0,104	0/0:19,0:18:7.73:0,8,138	0/1:14,2:16:4.11:4,0,351	1/1:4,22:27:55.94:449,56,0	1/1:2,8:10:17.96:148,18,0	1/1:8,15:23:15.85:325,16,0	1/1:1,13:14:35.96:296,36,0	1/1:3,13:16:38.93:318,39,0	1/1:5,13:18:9.98:285,10,0	1/1:1,12:15:37.03:283,37,0	1/1:3,10:13:26.95:222,27,0	1/1:3,13:17:37.98:301,38,0	1/1:1,15:16:38.95:320,39,0	1/1:4,15:21:49.01:380,49,0	1/1:2,17:19:41.95:345,42,0	1/1:2,20:22:53.33:442,53,0	1/1:2,11:14:34.67:261,35,0	1/1:0,11:11:32.96:271,33,0	1/1:3,13:16:29.96:246,30,0	1/1:2,2:4:2.79:24,3,0	1/1:2,11:13:11.80:247,12,0	1/1:3,12:15:32.95:271,33,0	1/1:1,10:11:26.96:222,27,0	1/1:4,9:13:26.96:222,27,0	1/1:3,28:32:53.95:639,54,0	1/1:0,12:12:32.96:271,33,0
chr10	63547476	.	C	CAGCCT	12726.72	PASS	AB=0.556;AC=33;AF=0.589;AN=56;BaseQRankSum=-10.988;DP=550;FS=5.712;HRun=0;HaplotypeScore=95.6954;InbreedingCoeff=0.9493;MQ=73.61;MQ0=0;MQRankSum=-3.612;QD=40.27;ReadPosRankSum=4.844;VQSLOD=4.5232;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:90.23:0,90,1547	0/0:7,0:7:15.02:0,15,209	0/0:16,0:16:33.10:0,33,539	0/0:14,0:14:8.63:0,9,336	0/0:21,0:20:35.85:0,36,467	1/1:4,9:16:21.07:574,21,0	1/1:9,15:27:27.04:725,27,0	0/0:24,0:24:57.09:0,57,951	0/0:20,0:20:51.17:0,51,981	1/1:6,13:20:43.34:959,43,0	0/1:1,1:5:0:0,0,0	1/1:3,10:17:24.08:705,24,0	1/1:1,12:16:27.09:794,27,0	1/1:6,19:28:45.15:1284,45,0	1/1:1,16:17:24.08:707,24,0	1/1:3,15:18:33.11:974,33,0	0/0:31,0:31:69.22:0,69,1309	0/0:28,0:28:69.22:0,69,1253	1/1:6,8:16:30.08:616,30,0	1/1:2,11:17:27.09:745,27,0	1/1:6,26:39:35.92:1062,36,0	1/1:5,11:17:12.04:354,12,0	1/1:1,5:10:12.50:354,12,0	1/1:5,18:23:54.19:1547,54,0	1/1:3,6:11:12.04:354,12,0	0/0:23,0:23:54.14:0,54,844	1/1:4,14:17:33.11:973,33,0	0/0:15,0:15:27.07:0,27,441
chr10	63547953	.	T	TTAAA	18217.42	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-11.466;DP=518;FS=4.418;HRun=0;HaplotypeScore=74.6247;InbreedingCoeff=0.9940;MQ=77.17;MQ0=0;MQRankSum=-4.116;QD=54.06;ReadPosRankSum=1.817;VQSLOD=6.0811;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:54.18:0,54,963	0/0:11,0:11:33.11:0,33,594	0/0:16,0:16:32.61:0,33,542	0/0:8,0:8:20.99:0,21,344	0/0:31,0:31:84.27:0,84,1489	1/1:3,15:19:33.11:864,33,0	1/1:2,17:21:48.12:1197,48,0	0/0:20,0:20:54.19:0,54,975	0/0:13,0:13:36.12:0,36,648	1/1:5,22:28:72.23:1734,72,0	1/1:7,24:31:72.03:1548,72,0	1/1:4,16:20:45.15:1178,45,0	1/1:4,21:26:63.17:1586,63,0	1/1:3,10:13:33.11:858,33,0	1/1:6,16:22:45.15:1178,45,0	1/1:3,12:18:30.10:785,30,0	0/0:20,0:20:57.20:0,57,1036	0/0:17,0:17:45.10:0,45,735	1/1:9,10:20:39.12:966,39,0	1/1:4,19:23:63.14:1517,63,0	1/1:3,10:14:27.09:707,27,0	1/1:3,5:8:14.96:276,15,0	1/1:2,17:19:48.08:1138,48,0	1/1:3,10:13:27.56:662,28,0	1/1:2,7:10:14.96:276,15,0	0/0:18,0:18:48.16:0,48,873	1/1:5,27:32:69.19:1747,69,0	0/0:9,0:9:24.08:0,24,437
chr10	63548174	.	TGAA	T	1675.07	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-1.294;DP=545;FS=0.617;HRun=0;HaplotypeScore=101.6196;InbreedingCoeff=0.9956;MQ=70.23;MQ0=0;MQRankSum=-2.943;QD=34.19;ReadPosRankSum=2.504;VQSLOD=4.3578;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,19:20:45.15:722,45,0	0/0:12,0:12:36.12:0,36,778	0/0:12,0:12:26.58:0,27,514	0/0:9,0:9:24.07:0,24,471	1/1:4,25:29:69.15:1074,69,0	0/0:20,0:20:54.18:0,54,1150	0/0:16,0:16:45.15:0,45,924	0/0:19,0:19:54.18:0,54,1155	0/0:17,0:17:51.16:0,51,1046	0/0:24,0:24:69.23:0,69,1476	0/0:29,0:29:87.21:0,87,1697	0/0:18,0:18:45.15:0,45,994	0/0:16,0:16:48.13:0,48,1013	0/0:14,0:14:39.11:0,39,781	0/0:28,0:28:81.25:0,81,1655	0/0:20,0:19:57.20:0,57,1256	0/0:25,0:25:66.23:0,66,1434	0/0:24,0:24:72.20:0,72,1502	0/0:16,0:16:33.11:0,33,728	0/0:24,0:24:69.22:0,69,1414	0/0:11,0:11:21.06:0,21,422	0/0:12,0:12:30.10:0,30,661	0/0:27,0:27:78.25:0,78,1638	0/0:13,0:13:33.10:0,33,669	0/0:13,0:13:36.10:0,36,752	0/0:19,0:19:57.20:0,57,1247	0/0:33,0:33:78.24:0,78,1621	0/0:25,0:25:75.24:0,75,1592
chr10	63549969	.	CGTGTGTGTGT	C	642.53	PASS	AB=0.896;AC=7;AF=0.175;AN=40;BaseQRankSum=0.927;DP=423;FS=1.351;HRun=0;HaplotypeScore=117.8800;InbreedingCoeff=0.2632;MQ=54.54;MQ0=22;MQRankSum=-2.698;QD=6.91;ReadPosRankSum=0.435;VQSLOD=2.0315;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:32:24.08:0,24,907	0/0:4,0:4:5.99:0,6,69	./.	./.	0/0:16,0:15:9.03:0,9,249	./.	0/0:15,0:15:0.47:0,0,1	0/0:25,0:23:8.97:0,9,73	0/0:9,0:8:6.01:0,6,90	0/0:11,0:10:14.98:0,15,463	./.	0/0:11,0:11:9:0,9,179	0/1:6,4:11:28.79:461,0,29	0/0:8,0:8:0.47:0,0,1	0/0:24,0:23:1.14:0,1,3	0/0:10,0:10:0.17:0,0,0	0/1:38,0:37:32.51:33,0,62	0/1:21,0:20:30.09:30,0,119	0/0:23,0:20:20.62:0,21,608	./.	0/0:15,0:11:0.47:0,0,1	./.	0/0:3,0:5:0.47:0,0,1	./.	./.	1/1:12,0:13:6.02:149,6,0	0/0:10,0:10:9.49:0,9,200	1/1:8,0:8:3.01:77,3,0
chr10	63549977	.	T	TGTGTGTTTGTAC	2003.01	PASS	AB=0.933;AC=18;AF=0.333;AN=54;BaseQRankSum=2.509;DP=428;FS=12.024;HRun=0;HaplotypeScore=122.8200;InbreedingCoeff=0.2772;MQ=45.01;MQ0=30;MQRankSum=-3.154;QD=11.51;ReadPosRankSum=-4.325;VQSLOD=0.0212;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:28:49.36:0,49,862	0/0:4,0:4:12.04:0,12,272	0/0:17,0:4:6.01:0,6,99	0/0:21,0:6:4.23:0,4,25	0/0:15,0:14:24.06:0,24,433	0/1:7,6:15:3.07:63,0,3	1/1:20,0:20:2.60:6,3,0	0/0:29,0:23:56.90:0,57,1083	0/0:8,0:7:8.19:0,8,268	0/1:11,0:10:17.57:354,0,18	1/1:3,4:11:2.97:20,3,0	1/1:11,0:10:9.03:306,9,0	0/0:12,0:12:20.17:0,20,554	1/1:11,0:11:0.47:1,0,0	1/1:21,0:21:25.65:213,26,0	1/1:13,0:11:6.96:91,7,0	0/0:38,0:37:40.29:0,40,705	0/0:20,0:17:37.63:0,38,884	0/1:22,0:19:48.89:829,0,49	0/1:10,0:9:15.06:51,0,15	0/1:16,0:10:23.04:28,0,23	0/0:6,0:4:3:0,3,25	0/0:6,0:6:1.23:0,1,66	0/0:15,0:12:3.01:0,3,68	./.	0/0:13,0:12:29.95:0,30,570	0/1:10,0:10:14.22:199,0,14	0/0:7,0:5:9.03:0,9,193
chr10	63549979	.	T	TGTGTTTGTAC	1868.51	PASS	AB=0.993;AC=18;AF=0.333;AN=54;BaseQRankSum=1.899;DP=421;FS=15.388;HRun=0;HaplotypeScore=113.7007;InbreedingCoeff=0.2609;MQ=44.70;MQ0=31;MQRankSum=-3.279;QD=10.86;ReadPosRankSum=-3.777;VQSLOD=-0.1793;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:27:49.78:0,50,805	0/0:4,0:4:12.04:0,12,259	0/0:16,0:4:6.01:0,6,99	0/0:19,0:4:5.82:0,6,36	0/0:15,0:14:24.06:0,24,424	0/1:14,0:13:3.07:63,0,3	1/1:20,0:20:2.60:6,3,0	0/0:29,0:23:57.17:0,57,1121	0/0:8,0:7:11.78:0,12,255	0/1:11,0:10:17.60:334,0,18	1/1:11,0:11:2.97:20,3,0	1/1:3,7:10:8.52:244,9,0	0/0:10,0:10:4.46:0,4,489	1/1:4,6:12:0.47:1,0,0	1/1:20,0:20:26.51:199,27,0	1/1:13,0:11:6.96:91,7,0	0/0:39,0:38:40.61:0,41,713	0/0:20,0:17:39.12:0,39,866	0/1:22,0:19:79.53:810,0,80	0/1:10,0:9:34.76:51,0,35	0/1:16,0:10:23.04:28,0,23	0/0:6,0:4:3:0,3,25	0/0:6,0:6:1.15:0,1,66	0/0:14,0:11:2.92:0,3,68	./.	0/0:14,0:13:30.01:0,30,547	0/1:10,0:10:29.43:179,0,29	0/0:6,0:4:9.03:0,9,179
chr10	63549981	.	T	TGTTTGTAC	1708.91	PASS	AB=1.000;AC=18;AF=0.333;AN=54;BaseQRankSum=2.479;DP=418;FS=13.161;HRun=0;HaplotypeScore=101.8794;InbreedingCoeff=0.2943;MQ=44.37;MQ0=31;MQRankSum=-2.503;QD=9.77;ReadPosRankSum=-3.408;VQSLOD=-0.1016;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:26:49.93:0,50,808	0/0:4,0:4:12.04:0,12,247	0/0:16,0:4:6.01:0,6,99	0/0:18,0:3:5.73:0,6,34	0/0:14,0:13:24.06:0,24,429	0/1:13,0:12:3.07:63,0,3	1/1:21,0:21:2.60:6,3,0	0/0:28,0:22:57.16:0,57,1109	0/0:8,0:7:9.50:0,10,219	0/1:10,0:9:20.80:314,0,21	0/1:10,0:10:13.99:14,0,19	1/1:10,0:10:5.65:196,6,0	0/0:10,0:10:23.67:0,24,461	1/1:12,0:12:0.38:1,0,0	1/1:22,0:21:25.69:170,26,0	1/1:4,10:12:7.43:91,7,0	0/0:39,0:38:40.61:0,41,709	0/0:19,0:16:39.13:0,39,841	0/1:24,0:20:99:774,0,122	0/1:9,0:8:50.82:51,0,52	1/1:19,0:13:7.45:41,7,0	0/0:6,0:4:3:0,3,25	0/0:6,0:6:1.20:0,1,66	0/0:14,0:11:5.22:0,5,76	./.	0/0:14,0:13:31.61:0,32,536	0/1:10,0:10:66.83:149,0,67	0/0:6,0:4:9.03:0,9,165
chr10	63549983	.	T	TTTGTAC	1533.38	PASS	AB=0.839;AC=16;AF=0.296;AN=54;BaseQRankSum=2.653;DP=415;FS=15.011;HRun=0;HaplotypeScore=92.0958;InbreedingCoeff=0.1453;MQ=43.94;MQ0=34;MQRankSum=-2.684;QD=8.57;ReadPosRankSum=-2.814;VQSLOD=0.5165;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:24:46.76:0,47,767	0/0:4,0:4:12.04:0,12,235	0/0:14,0:3:6.01:0,6,99	0/0:17,0:2:5.91:0,6,39	0/0:13,0:12:24.04:0,24,420	0/1:14,1:13:22.19:60,0,22	1/1:7,12:22:2.60:5,3,0	0/0:29,0:21:57.17:0,57,1135	0/0:8,0:7:9.50:0,10,196	0/1:11,0:9:60.51:294,0,61	0/1:10,0:10:13.98:14,0,40	0/1:10,1:10:13.10:133,0,13	0/0:10,0:10:24.55:0,25,416	0/1:11,0:11:0:1,0,0	1/1:10,12:21:22.74:161,23,0	1/1:14,0:12:6.49:93,6,0	0/0:38,0:37:5.93:0,6,631	0/0:19,0:16:39.13:0,39,791	0/1:12,9:20:99:705,0,167	0/1:3,4:8:50.82:51,0,56	1/1:20,0:14:4.06:34,4,0	0/0:6,0:4:3:0,3,25	0/0:5,0:5:1.35:0,1,66	0/0:14,0:11:5.52:0,6,79	./.	0/0:14,0:12:16.15:0,16,507	0/1:3,0:10:70.03:136,0,70	0/0:6,0:4:9.03:0,9,151
chr10	63549987	.	T	TAC	444.39	PASS	AB=0.916;AC=11;AF=0.212;AN=52;BaseQRankSum=2.488;DP=391;FS=19.332;HRun=0;HaplotypeScore=78.2358;InbreedingCoeff=0.0972;MQ=41.08;MQ0=34;MQRankSum=-0.078;QD=3.29;ReadPosRankSum=0.646;VQSLOD=-0.1849;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:24:41.45:0,41,450	0/0:4,0:4:12.01:0,12,142	0/0:10,0:2:5.61:0,6,58	0/0:15,0:1:2.90:0,3,16	0/0:12,0:11:21.03:0,21,257	0/0:13,0:11:3.01:0,3,46	1/1:20,0:20:1.72:4,2,0	0/0:27,0:18:48.15:0,48,706	0/0:8,0:7:8.62:0,9,116	0/1:4,5:7:33.27:134,0,33	0/0:9,0:9:3.01:0,3,46	0/1:12,0:11:11.94:12,0,18	0/0:10,0:10:23.92:0,24,233	0/1:12,0:12:0.20:0,0,0	0/1:20,0:19:12.80:13,0,34	1/1:14,0:12:5.17:44,5,0	0/0:37,0:35:33.05:0,33,431	0/0:20,0:17:42.11:0,42,517	0/1:22,0:18:99:307,0,196	0/0:7,0:6:3.01:0,3,46	0/1:17,2:14:0:0,0,0	./.	0/0:6,0:5:2.86:0,3,46	0/0:15,0:12:5.91:0,6,61	./.	0/0:13,0:11:29.90:0,30,338	0/1:5,1:6:51.63:52,0,61	0/0:6,0:4:8.94:0,9,81
chr10	63550007	.	TGTGTGTGAGAGAGAGA	T	955.16	PASS	AB=1.000;AC=13;AF=0.260;AN=50;BaseQRankSum=0.053;DP=333;FS=8.177;HRun=0;HaplotypeScore=105.8001;InbreedingCoeff=0.2255;MQ=38.30;MQ0=36;MQRankSum=-1.315;QD=7.64;ReadPosRankSum=2.366;VQSLOD=1.4180;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:24:36.12:0,36,1196	1/1:3,0:3:6.91:181,7,0	./.	./.	0/0:8,0:7:9.02:0,9,220	0/0:12,0:10:6.02:0,6,267	0/0:21,0:19:7.43:0,7,204	0/0:12,0:2:0:0,0,0	0/1:13,0:11:15.15:15,0,61	0/0:10,0:6:12.04:0,12,425	0/0:10,0:10:9.03:0,9,345	0/1:12,0:11:35.68:36,0,206	0/1:11,0:11:99:180,0,284	0/0:12,0:12:6.96:0,7,207	0/1:19,0:18:23.35:23,0,123	0/0:14,0:12:3.32:0,3,80	1/1:9,22:29:8.64:293,9,0	1/1:18,0:15:7.01:295,7,0	0/0:16,0:12:33.11:0,33,1152	0/0:6,0:4:6.02:0,6,261	0/0:18,0:12:0.47:0,0,1	./.	0/0:6,0:4:0.47:0,0,1	0/0:14,0:11:6.02:0,6,259	0/0:8,0:7:3.01:0,3,130	0/1:12,0:9:35.03:35,0,765	0/0:8,0:7:12.04:0,12,276	1/1:6,0:2:3.01:39,3,0
chr10	63550013	.	TGAGAGAGA	T	398.49	PASS	AB=0.938;AC=7;AF=0.146;AN=48;BaseQRankSum=1.581;DP=338;FS=0.000;HRun=0;HaplotypeScore=91.6062;InbreedingCoeff=0.3973;MQ=38.15;MQ0=35;MQRankSum=-0.787;QD=6.04;ReadPosRankSum=0.056;VQSLOD=1.7164;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:23:21.07:0,21,603	1/1:3,0:3:6.02:132,6,0	./.	./.	0/0:7,0:6:3.01:0,3,96	0/0:13,0:11:6.02:0,6,200	0/0:21,0:19:6.02:0,6,151	0/0:13,0:3:3.01:0,3,100	0/1:14,0:13:9.08:59,0,9	0/0:10,0:5:8.24:0,8,238	0/0:10,0:10:9.03:0,9,252	0/0:14,0:13:7.40:0,7,150	0/0:11,0:11:8.32:0,8,189	0/0:13,0:13:9.50:0,10,256	0/0:20,0:19:5.91:0,6,206	0/0:12,0:10:2.35:0,2,52	1/1:27,1:27:8.72:189,9,0	1/1:12,7:16:6.02:137,6,0	0/0:15,0:10:21.06:0,21,643	0/0:6,0:4:6.02:0,6,200	./.	./.	0/0:7,0:4:0.47:0,0,1	0/0:15,0:12:6.02:0,6,200	0/0:8,0:7:3.01:0,3,104	0/0:11,0:9:20.90:0,21,637	0/0:10,0:9:11.25:0,11,278	0/0:7,0:3:5.05:0,5,97
chr10	63551894	.	ATGTC	A	2711.34	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=10.064;DP=760;FS=31.380;HRun=0;HaplotypeScore=141.2322;InbreedingCoeff=0.9989;MQ=69.62;MQ0=0;MQRankSum=0.216;QD=33.07;ReadPosRankSum=3.996;VQSLOD=1.7202;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,99,2447	0/0:11,0:11:24.04:0,24,529	0/0:33,0:33:57.19:0,57,1284	0/0:36,0:34:72.14:0,72,1591	0/0:41,0:41:84.29:0,84,2059	0/0:15,0:14:42.10:0,42,993	0/0:24,0:24:69.24:0,69,1724	0/0:36,0:36:84.26:0,84,2012	0/0:34,0:34:81.28:0,81,1996	0/0:22,0:22:60.21:0,60,1504	0/0:13,0:13:30.07:0,30,693	0/0:35,0:35:90.29:0,90,2179	1/1:3,18:21:45.15:767,45,0	0/0:34,0:34:81.28:0,81,2007	0/0:32,0:32:69.24:0,69,1718	0/0:22,0:22:54.19:0,54,1352	0/0:35,0:35:90.31:0,90,2194	0/0:20,0:20:51.18:0,51,1277	0/0:16,0:16:39.13:0,39,962	0/0:28,0:28:66.23:0,66,1642	0/0:43,0:43:93.30:0,93,2274	1/1:5,23:28:54.14:876,54,0	1/1:0,14:14:33.11:563,33,0	1/1:4,15:19:39.13:665,39,0	0/0:16,0:16:42.14:0,42,1051	0/0:38,0:38:99:0,105,2594	0/0:34,0:33:90.31:0,90,2218	0/0:12,0:12:27.05:0,27,621
chr10	63552261	.	ATTT	A	8209.93	PASS	AB=0.941;AC=35;AF=0.625;AN=56;BaseQRankSum=-11.038;DP=562;FS=3.316;HRun=14;HaplotypeScore=101.8947;InbreedingCoeff=0.9450;MQ=75.19;MQ0=3;MQRankSum=0.443;QD=23.66;ReadPosRankSum=7.584;VQSLOD=3.9276;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:37:70.12:0,70,1030	0/0:3,0:7:18.04:0,18,239	0/1:30,0:20:3.70:4,0,444	0/0:26,0:20:40.11:0,40,464	0/0:6,0:25:63.21:0,63,945	1/1:0,23:23:60.18:701,60,0	1/1:5,13:18:33.02:386,33,0	0/0:21,0:33:55.05:0,55,763	0/0:2,0:11:24.05:0,24,322	1/1:5,11:16:30:338,30,0	1/1:2,11:13:33.04:386,33,0	1/1:6,10:16:35.85:370,36,0	1/1:1,17:18:45.09:526,45,0	1/1:1,14:15:36.10:421,36,0	1/1:3,21:24:54.07:614,54,0	1/1:2,17:19:51.10:596,51,0	0/0:4,0:14:36.12:0,36,540	0/0:4,0:21:48.16:0,48,701	1/1:5,11:17:31.68:383,32,0	1/1:4,17:21:45.07:526,45,0	1/1:4,16:23:43.30:470,43,0	1/1:2,21:24:57.10:666,57,0	1/1:1,13:14:36.07:421,36,0	1/1:3,13:16:30.05:351,30,0	1/1:1,12:13:33.09:386,33,0	0/0:8,0:22:57.16:0,57,820	1/1:2,23:25:56.90:666,57,0	0/0:3,0:18:39.13:0,39,582
chr10	63552921	.	CAT	C	4513.66	PASS	AB=0.895;AC=35;AF=0.673;AN=52;BaseQRankSum=-6.426;DP=357;FS=0.693;HRun=0;HaplotypeScore=63.2171;InbreedingCoeff=0.5819;MQ=69.30;MQ0=0;MQRankSum=6.029;QD=18.50;ReadPosRankSum=3.756;VQSLOD=4.6124;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:4:0.89:0,1,2	0/0:1,0:6:3.01:0,3,34	0/1:6,0:6:0.15:0,0,1	0/0:14,0:7:0.50:0,0,3	./.	1/1:6,15:21:36.11:443,36,0	1/1:2,6:8:12.04:148,12,0	0/0:44,0:43:49.40:0,49,334	./.	1/1:2,17:19:47.21:508,47,0	1/1:3,14:17:33.10:406,33,0	1/1:1,15:16:27.08:332,27,0	1/1:0,8:9:14.88:162,15,0	1/1:5,8:13:15.05:184,15,0	1/1:3,6:9:9.03:111,9,0	1/1:0,4:4:9.03:111,9,0	0/0:1,0:15:11.98:0,12,112	0/0:1,0:12:12:0,12,104	1/1:4,9:14:29.92:335,30,0	1/1:5,14:20:0.49:382,0,0	1/1:4,6:10:15.05:185,15,0	1/1:1,4:5:6.02:74,6,0	0/1:7,6:13:39.87:65,0,40	1/1:1,5:6:12.04:148,12,0	1/1:5,17:22:39.12:480,39,0	0/1:5,0:9:35.67:36,0,44	1/1:4,19:23:33.10:406,33,0	0/0:1,0:12:18.01:0,18,159
chr10	63553512	.	GA	G	7805.43	PASS	AB=0.962;AC=50;AF=0.893;AN=56;BaseQRankSum=3.932;DP=546;FS=1.854;HRun=11;HaplotypeScore=58.9702;InbreedingCoeff=0.6456;MQ=69.45;MQ0=0;MQRankSum=-1.412;QD=15.71;ReadPosRankSum=1.542;VQSLOD=5.5170;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,2:27:43.32:0,43,642	1/1:0,4:5:11.03:80,11,0	0/1:12,0:14:7.01:7,0,140	0/1:11,1:11:9.82:10,0,91	0/0:22,0:22:53.95:0,54,550	1/1:4,14:18:35.94:295,36,0	1/1:5,18:23:41.94:344,42,0	1/1:6,26:32:45.91:584,46,0	1/1:5,15:22:37.97:301,38,0	1/1:4,20:24:56.90:465,57,0	1/1:3,17:20:18.96:362,19,0	1/1:4,13:18:29:228,29,0	1/1:7,13:20:26.91:262,27,0	1/1:1,15:16:29.96:246,30,0	1/1:4,22:27:44.94:369,45,0	1/1:4,15:20:37.97:301,38,0	1/1:2,8:10:23.97:197,24,0	1/1:3,19:22:47.88:388,48,0	1/1:3,24:27:42.84:540,43,0	1/1:3,18:22:30.89:394,31,0	1/1:1,16:17:41.94:345,42,0	1/1:3,3:6:5.99:49,6,0	1/1:3,10:14:23.01:178,23,0	1/1:7,26:33:62.89:517,63,0	1/1:2,12:14:32.96:271,33,0	1/1:4,19:25:60.99:480,61,0	1/1:3,25:28:53.80:443,54,0	1/1:1,6:7:17.97:148,18,0
chr10	63553658	.	T	TG	4365.86	PASS	AC=32;AF=0.593;AN=54;BaseQRankSum=11.915;DP=457;FS=0.462;HRun=0;HaplotypeScore=96.8065;InbreedingCoeff=0.9055;MQ=49.88;MQ0=3;MQRankSum=-8.818;QD=19.58;ReadPosRankSum=0.103;VQSLOD=6.3123;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:66.64:0,67,704	0/0:9,0:9:26.26:0,26,220	0/0:13,0:5:11.99:0,12,128	0/0:11,0:6:8.30:0,8,125	0/0:30,0:30:88.98:0,89,856	1/1:0,12:12:15.05:203,15,0	1/1:0,12:12:15.05:201,15,0	0/0:35,0:34:86.89:0,87,555	0/0:22,0:22:62.13:0,62,585	1/1:1,21:22:63.21:883,63,0	1/1:0,15:15:15.05:204,15,0	1/1:0,16:16:21.07:274,21,0	1/1:0,12:12:18.02:224,18,0	1/1:0,8:8:9.03:121,9,0	1/1:1,13:14:21.07:279,21,0	1/1:0,10:10:15.05:205,15,0	0/0:18,0:18:47.42:0,47,443	0/0:31,0:31:82.45:0,82,726	1/1:0,14:14:39.13:549,39,0	1/1:0,21:21:24.08:329,24,0	./.	1/1:0,12:12:3.01:41,3,0	1/1:0,12:12:9.03:125,9,0	1/1:0,2:2:3.01:40,3,0	1/1:2,16:18:21.07:290,21,0	0/0:27,0:27:78.10:0,78,906	1/1:1,21:23:30.08:396,30,0	0/0:10,0:10:30.02:0,30,280
chr10	63553660	.	T	TC	13488.98	PASS	AC=50;AF=0.926;AN=54;BaseQRankSum=-3.273;DP=472;FS=0.000;HRun=1;HaplotypeScore=67.2141;InbreedingCoeff=0.7252;MQ=49.91;MQ0=3;MQRankSum=-2.120;QD=29.98;ReadPosRankSum=2.804;VQSLOD=4.5673;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,26:29:75.25:1122,75,0	1/1:0,10:10:27.09:404,27,0	0/0:10,1:4:9.03:0,9,107	0/0:11,0:6:8.99:0,9,86	1/1:0,30:30:87.29:1303,87,0	1/1:12,0:12:15.05:211,15,0	1/1:12,0:12:15.05:211,15,0	1/1:7,33:39:99:1535,105,0	1/1:1,21:22:60.20:899,60,0	1/1:23,0:23:66.22:913,66,0	1/1:16,0:16:15.05:212,15,0	1/1:17,0:17:24.05:319,24,0	1/1:12,0:12:18.02:232,18,0	1/1:10,0:10:14.99:171,15,0	1/1:15,0:15:24.07:322,24,0	1/1:11,0:11:15.05:211,15,0	1/1:1,18:19:48.16:719,48,0	1/1:1,31:32:81.27:1212,81,0	1/1:15,0:15:42.14:578,42,0	1/1:22,0:22:27.08:363,27,0	./.	1/1:13,0:13:3.01:42,3,0	1/1:12,0:12:9.03:125,9,0	1/1:2,0:2:3.01:42,3,0	1/1:17,0:17:24.07:315,24,0	1/1:0,28:28:84.27:1239,84,0	1/1:23,0:23:33.06:427,33,0	1/1:0,8:8:24.08:360,24,0
chr10	63559621	.	T	TA	457.08	PASS	AC=20;AF=0.476;AN=42;BaseQRankSum=0.333;DP=268;FS=2.950;HRun=0;HaplotypeScore=59.2227;InbreedingCoeff=0.7886;MQ=72.10;MQ0=5;MQRankSum=2.332;QD=15.24;ReadPosRankSum=-6.047;VQSLOD=3.0452;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:42:98.31:0,98,1317	0/0:10,0:10:27.09:0,27,365	0/0:16,0:10:29.79:0,30,344	0/0:12,0:7:11.88:0,12,231	0/0:32,0:32:96.28:0,96,1304	./.	1/1:3,0:3:5.23:49,5,0	0/0:29,0:28:71.81:0,72,881	0/0:16,0:16:37.18:0,37,202	1/1:1,4:5:9.01:96,9,0	1/1:1,6:6:11.66:103,12,0	./.	./.	1/1:2,0:2:3.41:19,3,0	1/1:1,0:1:3:27,3,0	1/1:2,0:2:6.01:65,6,0	0/0:34,0:34:71.71:0,72,910	0/0:14,0:14:38.86:0,39,494	1/1:1,2:2:6.02:82,6,0	1/1:2,0:2:5.99:59,6,0	./.	./.	./.	./.	1/1:2,0:2:6.02:73,6,0	0/0:24,0:24:66.10:0,66,806	1/1:3,0:3:5.99:49,6,0	0/0:5,0:5:12.04:0,12,164
chr10	63559623	.	GT	G	954.90	PASS	AB=1.000;AC=6;AF=0.214;AN=28;BaseQRankSum=-5.858;DP=262;FS=0.000;HRun=14;HaplotypeScore=60.1952;InbreedingCoeff=0.5641;MQ=70.08;MQ0=9;MQRankSum=1.594;QD=10.27;ReadPosRankSum=2.658;VQSLOD=3.1555;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:12,31:44:73.28:511,73,0	0/0:3,0:11:20.22:0,20,113	0/0:16,0:10:3.58:0,4,73	0/0:11,0:6:5.98:0,6,49	1/1:7,23:31:68.42:491,68,0	./.	0/0:1,0:1:0:0,0,0	0/0:14,0:30:39.87:0,40,228	0/1:16,0:16:37.37:59,0,37	./.	./.	./.	./.	0/1:2,0:2:0:0,0,0	./.	./.	0/0:6,0:36:53.59:0,54,272	0/0:5,0:16:25.69:0,26,135	./.	0/0:2,0:1:0:0,0,0	./.	./.	./.	./.	./.	0/0:14,0:23:40.06:0,40,221	./.	0/0:6,0:6:12.34:0,12,92
chr10	63559790	.	CTTTCTT	C	6714.88	PASS	AB=0.865;AC=25;AF=0.446;AN=56;BaseQRankSum=-2.907;DP=591;FS=4.369;HRun=0;HaplotypeScore=180.8064;InbreedingCoeff=0.3403;MQ=62.77;MQ0=10;MQRankSum=-1.828;QD=21.59;ReadPosRankSum=2.858;VQSLOD=4.1724;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:30.08:0,30,603	0/0:10,0:10:30.09:0,30,787	0/0:54,0:24:10.28:0,10,632	0/0:58,0:20:29.08:0,29,245	0/0:16,0:14:33.05:0,33,628	1/1:9,5:13:12.68:410,13,0	0/1:8,1:9:29.44:125,0,29	0/0:39,0:38:81.05:0,81,1690	0/0:19,0:19:48.12:0,48,875	1/1:12,18:30:22.97:861,23,0	0/1:16,8:25:6.72:729,0,7	1/1:9,7:16:17.56:579,18,0	0/1:14,0:14:93.31:192,0,93	1/1:4,3:6:10.77:277,11,0	1/1:9,6:13:5.01:503,5,0	1/1:26,4:30:23.62:732,24,0	0/0:20,0:20:39.05:0,39,833	0/0:13,0:13:36.08:0,36,958	1/1:18,1:19:24.29:322,24,0	0/1:19,3:23:10.07:420,0,10	0/1:5,2:7:1.23:99,0,1	0/1:10,0:9:77.56:78,0,109	0/1:9,0:32:41.42:41,0,81	1/1:2,0:2:3.01:32,3,0	0/1:17,8:28:99:804,0,102	0/0:24,0:23:42.61:0,43,799	0/1:25,2:30:59.71:511,0,60	0/0:11,0:11:21:0,21,224
chr10	63559792	.	TTC	T	4888.29	PASS	AB=0.950;AC=35;AF=0.625;AN=56;BaseQRankSum=4.408;DP=598;FS=15.555;HRun=0;HaplotypeScore=154.3403;InbreedingCoeff=0.5344;MQ=61.21;MQ0=10;MQRankSum=-5.338;QD=13.43;ReadPosRankSum=-0.632;VQSLOD=3.9134;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:6.33:0,6,169	0/0:11,0:11:32.91:0,33,380	0/0:56,0:24:40.22:0,40,442	0/0:59,1:20:18.66:0,19,156	0/0:16,0:14:27.31:0,27,224	1/1:13,0:12:31.67:247,32,0	1/1:9,0:9:0.66:100,1,0	0/0:40,0:38:76.47:0,76,844	0/1:18,1:19:12.45:12,0,173	1/1:29,0:29:55.67:491,56,0	1/1:25,0:25:62.83:481,63,0	1/1:15,0:15:39.74:333,40,0	0/1:15,0:14:5.22:192,0,5	1/1:9,0:8:15.32:148,15,0	1/1:15,0:13:23.08:248,23,0	1/1:31,0:31:72.15:516,72,0	0/0:20,0:20:38.93:0,39,429	0/0:13,0:13:33.52:0,34,420	1/1:19,0:19:37.99:291,38,0	1/1:23,0:23:52.48:414,52,0	1/1:6,0:6:12.08:83,12,0	0/1:12,0:11:14.30:125,0,14	1/1:29,0:29:0.96:87,1,0	1/1:2,0:2:3.01:32,3,0	1/1:29,0:29:57.77:525,58,0	0/1:20,3:22:68.34:68,0,103	1/1:30,0:30:62.20:475,62,0	0/1:10,1:11:22.23:22,0,80
chr10	63559793	.	TC	T	5417.43	PASS	AB=0.968;AC=37;AF=0.661;AN=56;BaseQRankSum=6.254;DP=598;FS=25.747;HRun=1;HaplotypeScore=146.1834;InbreedingCoeff=0.7081;MQ=60.76;MQ0=12;MQRankSum=-5.613;QD=14.88;ReadPosRankSum=-1.027;VQSLOD=2.9929;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:17,0:17:5.35:5,0,83	0/0:11,0:11:32.64:0,33,287	0/0:59,1:25:43.30:0,43,385	0/0:60,2:20:15.45:0,15,98	0/0:15,0:13:15:0,15,120	1/1:12,1:12:32.68:277,33,0	1/1:8,1:9:21.47:161,21,0	0/0:40,0:38:69.54:0,70,662	0/1:17,1:18:54.54:55,0,79	1/1:27,1:28:69.33:537,69,0	1/1:23,2:25:68.35:513,68,0	1/1:13,2:15:42.31:335,42,0	1/1:13,1:13:24.56:224,25,0	1/1:9,0:8:17.27:141,17,0	1/1:14,1:13:34.85:262,35,0	1/1:28,3:31:82.86:621,83,0	0/0:22,0:22:29.74:0,30,314	0/0:12,1:13:14.67:0,15,281	1/1:19,0:18:42.98:323,43,0	1/1:23,0:23:61.87:432,62,0	1/1:6,0:6:13.15:98,13,0	1/1:11,1:11:7.33:133,7,0	1/1:25,2:27:19.80:126,20,0	1/1:2,0:2:3:28,3,0	1/1:26,3:29:77.33:585,77,0	0/1:21,1:21:30.27:30,0,176	1/1:29,1:30:75.24:529,75,0	0/0:10,0:10:4.48:0,4,103
chr10	63559794	.	CT	C	725.77	PASS	AB=0.959;AC=22;AF=0.393;AN=56;BaseQRankSum=-1.073;DP=608;FS=6.553;HRun=15;HaplotypeScore=165.6426;InbreedingCoeff=0.0129;MQ=60.18;MQ0=12;MQRankSum=0.926;QD=2.31;ReadPosRankSum=5.991;VQSLOD=-0.7213;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:16,4:20:1.54:109,0,2	0/0:11,0:11:23.99:0,24,207	0/0:59,4:24:9.17:0,9,261	0/0:66,0:23:3.40:0,3,105	0/1:10,5:13:6.25:82,0,6	0/1:12,0:11:3.18:27,0,3	0/1:9,0:9:8.82:9,0,39	0/0:39,0:38:36.78:0,37,323	1/1:11,7:18:32.78:204,33,0	0/1:28,0:28:40.31:49,0,40	0/1:25,0:25:11.49:40,0,11	0/1:16,0:16:9.23:33,0,9	0/0:14,0:13:8.24:0,8,50	0/1:9,0:8:1.78:9,0,2	0/1:14,1:13:21.94:37,0,22	0/1:30,1:31:30.85:31,0,68	0/0:23,0:23:29.88:0,30,243	0/0:13,0:14:4.48:0,4,180	0/0:20,0:19:14.67:0,15,58	0/1:22,0:22:9.44:9,0,38	0/1:6,0:6:2.70:6,0,3	0/0:11,1:11:2.96:0,3,27	0/1:25,2:27:12.26:42,0,12	1/1:2,0:2:1.55:4,2,0	0/1:29,0:29:44.63:45,0,56	1/1:15,0:21:21.52:132,22,0	0/0:31,0:31:15.93:0,16,110	1/1:6,0:8:6.09:18,6,0
chr10	63559805	.	T	TTGC	4618.31	PASS	AB=0.850;AC=15;AF=0.268;AN=56;BaseQRankSum=8.928;DP=663;FS=5.884;HRun=0;HaplotypeScore=199.5269;InbreedingCoeff=-0.3412;MQ=56.33;MQ0=14;MQRankSum=-7.886;QD=14.85;ReadPosRankSum=3.387;VQSLOD=4.2184;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:37.17:0,37,378	0/0:11,0:11:30.10:0,30,446	0/0:74,0:29:63.59:0,64,681	0/0:74,0:24:0.19:0,0,231	0/0:25,0:23:41.77:0,42,425	0/1:14,2:15:70.72:266,0,71	0/1:5,0:6:44.73:62,0,45	0/0:39,0:37:80.27:0,80,1018	0/0:21,0:21:56.38:0,56,664	0/1:32,1:35:99:393,0,171	0/1:25,1:28:39.84:424,0,40	0/1:9,1:12:42.21:229,0,42	0/0:8,0:7:11.52:0,12,98	0/1:7,1:7:2.79:134,0,3	0/1:17,1:17:99:196,0,130	0/1:18,7:30:37.53:699,0,38	0/0:22,0:22:43.20:0,43,577	0/0:16,0:16:40.93:0,41,552	0/1:19,3:21:99:284,0,183	0/1:11,5:21:21.66:445,0,22	0/1:4,1:5:25.84:71,0,26	0/1:13,0:11:8.70:9,0,176	0/1:29,0:29:36.65:37,0,109	0/0:5,0:5:3.95:0,4,36	0/1:19,0:28:70.55:651,0,71	0/0:25,0:24:72.11:0,72,780	0/1:26,4:35:73.99:718,0,74	0/0:10,0:10:21.06:0,21,258
chr10	63559808	.	TTCTTTG	T	3737.30	PASS	AB=0.960;AC=21;AF=0.375;AN=56;BaseQRankSum=2.192;DP=643;FS=14.382;HRun=0;HaplotypeScore=207.1150;InbreedingCoeff=-0.1425;MQ=55.43;MQ0=14;MQRankSum=-4.036;QD=9.73;ReadPosRankSum=-1.652;VQSLOD=1.5772;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:22:22.14:0,22,426	0/0:11,0:11:32.98:0,33,618	0/1:73,0:30:4.45:4,0,619	0/0:70,0:22:21.25:0,21,391	0/0:23,0:21:24.15:0,24,344	0/1:16,0:15:76.97:198,0,77	0/1:8,0:8:48.04:52,0,48	0/0:36,0:34:72.39:0,72,1283	0/0:20,0:20:45.07:0,45,715	0/1:31,2:33:53.61:410,0,54	0/1:26,0:26:99:157,0,101	1/1:12,0:12:25.13:198,25,0	0/1:7,1:7:70.05:71,0,70	0/1:5,4:8:8.02:147,0,8	0/1:17,0:15:99:169,0,111	0/1:23,2:25:99:343,0,113	0/0:23,0:23:5.51:0,6,740	0/0:16,0:16:29.27:0,29,848	0/1:21,0:18:99:157,0,300	1/1:22,0:21:7.96:422,8,0	0/1:5,0:5:18.75:90,0,19	0/1:12,0:10:99:128,0,136	0/1:29,0:29:69.78:282,0,70	1/1:6,0:6:18.04:227,18,0	0/1:27,1:28:74.20:375,0,74	0/0:24,0:26:71.08:0,71,1020	0/1:33,0:32:99:308,0,280	0/0:9,0:10:21.07:0,21,389
chr10	63559810	.	CTTTGCT	C	1523.63	PASS	AB=0.966;AC=19;AF=0.339;AN=56;BaseQRankSum=-2.140;DP=652;FS=34.108;HRun=0;HaplotypeScore=218.3655;InbreedingCoeff=-0.3320;MQ=55.49;MQ0=13;MQRankSum=-2.842;QD=3.79;ReadPosRankSum=-3.941;VQSLOD=0.8154;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:31.11:0,31,538	0/0:10,0:10:29.98:0,30,513	0/1:72,0:30:7.28:7,0,596	0/0:71,0:22:36.07:0,36,406	0/0:24,0:22:35.65:0,36,459	0/1:17,0:16:99:135,0,136	0/1:8,0:8:3.40:3,0,117	0/0:36,0:34:73.36:0,73,1266	0/0:21,0:21:54.08:0,54,991	0/1:33,0:33:88.25:88,0,275	0/1:26,0:26:2.48:2,0,255	0/0:12,0:12:0.72:0,1,127	0/1:5,3:7:63.61:90,0,64	0/1:9,0:8:30.94:31,0,53	0/1:18,0:16:38.07:38,0,198	0/1:25,1:26:99:120,0,352	0/1:24,0:24:7.20:7,0,626	0/0:16,0:16:35.03:0,35,809	0/1:22,0:20:64.48:64,0,397	0/1:22,1:22:71.72:161,0,72	0/1:6,0:6:20.52:21,0,27	0/1:11,1:10:99:141,0,167	0/1:25,3:28:81.56:363,0,82	1/1:3,3:6:18.02:285,18,0	0/1:28,0:28:52.89:53,0,255	0/0:28,0:27:65.69:0,66,1142	0/1:33,0:33:73.34:73,0,456	0/0:10,0:10:21.07:0,21,429
chr10	63559815	.	C	CTT	2840.46	PASS	AB=0.976;AC=34;AF=0.607;AN=56;BaseQRankSum=-3.125;DP=664;FS=0.462;HRun=13;HaplotypeScore=179.7929;InbreedingCoeff=0.0873;MQ=55.87;MQ0=14;MQRankSum=1.860;QD=5.69;ReadPosRankSum=3.076;VQSLOD=0.2007;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:13,1:23:24.16:198,24,0	1/1:3,5:10:16.59:183,17,0	0/0:72,0:31:23.34:0,23,168	0/0:67,0:20:4.19:0,4,67	1/1:15,0:25:24.61:235,25,0	0/1:19,0:19:12.40:12,0,61	0/0:8,0:8:8.71:0,9,56	1/1:23,11:34:41.53:482,42,0	1/1:12,0:21:12.60:122,13,0	0/1:32,0:32:99:102,0,102	0/1:18,0:30:19.87:95,0,20	0/1:12,0:12:0.93:22,0,1	0/1:7,0:6:3.61:14,0,4	0/0:9,0:8:3.25:0,3,42	0/1:18,0:17:7.22:7,0,74	0/1:26,0:26:30.82:31,0,111	1/1:4,18:23:38.53:470,39,0	1/1:5,10:18:26.57:323,27,0	0/1:23,0:20:45.01:45,0,69	0/1:21,0:21:52.17:52,0,97	0/1:6,0:6:3.72:4,0,38	1/1:11,0:11:1.97:51,2,0	1/1:27,0:28:23.95:141,24,0	0/0:5,0:6:7.72:0,8,43	0/1:31,0:31:56.51:57,0,139	1/1:18,0:27:37.32:273,37,0	0/1:33,0:32:42.27:42,0,165	1/1:4,0:11:14.97:52,15,0
chr10	63559954	.	G	GT	17190.54	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-11.283;DP=640;FS=0.975;HRun=1;HaplotypeScore=62.1721;InbreedingCoeff=0.9852;MQ=67.08;MQ0=0;MQRankSum=-4.670;QD=42.45;ReadPosRankSum=2.080;VQSLOD=5.2355;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,111,1492	0/0:13,0:13:39.13:0,39,545	0/0:20,0:20:47.16:0,47,684	0/0:23,0:23:56.01:0,56,808	0/0:25,0:25:75.25:0,75,1049	1/1:0,21:21:45.15:719,45,0	1/1:0,18:18:51.17:815,51,0	0/0:21,0:21:63.20:0,63,867	0/0:21,0:21:63.20:0,63,862	1/1:1,25:26:69.24:1103,69,0	1/1:1,28:29:81.28:1293,81,0	1/1:0,24:24:66.23:1054,66,0	1/1:0,18:17:48.16:767,48,0	1/1:0,7:7:21.07:335,21,0	1/1:1,25:25:72.25:1150,72,0	1/1:1,31:32:90.31:1438,90,0	0/0:23,0:23:66.22:0,66,923	0/0:18,0:18:51.13:0,51,691	1/1:1,27:28:84.23:1282,84,0	1/1:0,21:21:54.18:863,54,0	1/1:0,34:34:90.31:1439,90,0	1/1:0,19:19:54.18:863,54,0	1/1:1,15:16:39.13:623,39,0	1/1:1,27:28:72.25:1151,72,0	1/1:0,25:25:63.21:1007,63,0	0/0:17,1:18:6.33:0,6,665	1/1:1,31:32:81.28:1289,81,0	0/0:12,0:12:36.12:0,36,503
chr10	63561071	.	A	ACACA	1786.12	PASS	AB=1.000;AC=36;AF=0.720;AN=50;BaseQRankSum=-6.149;DP=578;FS=1.098;HRun=0;HaplotypeScore=138.0491;InbreedingCoeff=0.5409;MQ=53.32;MQ0=9;MQRankSum=4.955;QD=4.28;ReadPosRankSum=-2.505;VQSLOD=1.7886;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:37,0:37:20.50:315,21,0	0/0:7,0:7:3:0,3,28	./.	./.	1/1:27,0:26:8.77:152,9,0	1/1:31,0:31:3:52,3,0	1/1:25,0:25:3:67,3,0	./.	0/0:16,0:16:11.89:0,12,111	1/1:18,0:17:5.30:58,5,0	1/1:10,0:9:9.02:132,9,0	1/1:27,0:26:9.92:169,10,0	1/1:14,0:13:8.85:172,9,0	1/1:24,0:23:5.98:97,6,0	1/1:24,0:24:8.99:93,9,0	1/1:27,0:27:2.94:51,3,0	0/0:22,0:22:15.02:0,15,140	0/0:8,0:8:3:0,3,28	1/1:9,0:9:3.01:53,3,0	1/1:17,0:17:3:51,3,0	0/1:21,0:19:0:0,0,0	1/1:20,5:26:9.03:183,9,0	1/1:10,0:9:8.94:132,9,0	0/1:30,0:30:0.15:1,0,0	1/1:19,0:19:2.97:68,3,0	0/0:26,0:26:15.02:0,15,139	1/1:21,0:20:7.43:90,7,0	0/0:8,0:8:6.01:0,6,56
chr10	63561093	.	ACACACACACACACACT	A	2922.66	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=4.196;DP=602;FS=0.000;HRun=0;HaplotypeScore=222.2352;InbreedingCoeff=0.6117;MQ=47.64;MQ0=12;MQRankSum=-4.706;QD=26.10;ReadPosRankSum=-0.044;VQSLOD=2.4913;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:71.23:0,71,3589	1/1:0,7:7:3.01:145,3,0	0/0:25,0:12:29.24:0,29,492	0/0:26,0:11:26.27:0,26,725	0/0:28,0:28:45.55:0,46,1885	0/0:31,0:31:29.15:0,29,804	0/0:32,0:32:57.55:0,58,2098	1/1:22,0:21:32.59:505,33,0	0/1:20,0:20:12.93:384,0,13	0/0:22,0:21:58.73:0,59,2834	0/0:12,0:11:21.03:0,21,803	0/0:31,0:30:37.35:0,37,1356	0/0:14,0:13:31.52:0,32,1450	0/0:31,0:30:46.26:0,46,1839	0/0:21,0:21:27.53:0,28,1228	0/0:25,0:25:42.62:0,43,1563	1/1:8,6:14:32.92:960,33,0	1/1:4,1:6:17.85:291,18,0	0/0:13,0:13:29.87:0,30,828	0/0:17,0:17:14.07:0,14,642	0/0:21,0:19:17.15:0,17,743	0/0:26,0:26:42.14:0,42,1541	0/0:13,0:12:29.36:0,29,1191	0/0:30,0:30:29.50:0,29,1129	0/0:21,0:21:28.75:0,29,1121	0/1:27,0:27:99:644,0,127	0/0:21,0:20:39.38:0,39,1587	0/1:16,0:16:62.41:158,0,62
chr10	63561095	.	ACACACACACACACT	A	3515.67	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=5.746;DP=587;FS=1.054;HRun=0;HaplotypeScore=199.5962;InbreedingCoeff=0.9367;MQ=47.83;MQ0=12;MQRankSum=-4.372;QD=37.01;ReadPosRankSum=1.313;VQSLOD=3.2866;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:71.23:0,71,3108	1/1:7,0:7:3.01:111,3,0	0/0:25,0:12:29.23:0,29,437	0/0:26,0:11:19.40:0,19,519	0/0:29,0:29:48.53:0,49,1633	0/0:30,0:30:29.25:0,29,644	0/0:33,0:33:60.62:0,61,1756	1/1:19,0:18:50.87:453,51,0	1/1:0,15:15:14.83:634,15,0	0/0:21,0:20:55.36:0,55,2378	0/0:13,0:12:24.01:0,24,732	0/0:31,0:30:33.99:0,34,1107	0/0:13,0:12:28.08:0,28,1184	0/0:31,0:30:46.32:0,46,1522	0/0:22,0:22:30.51:0,31,1103	0/0:27,0:27:47.97:0,48,1416	1/1:13,0:13:29.94:733,30,0	1/1:6,0:6:17.87:223,18,0	0/0:14,0:14:29.19:0,29,691	0/0:18,0:18:17.16:0,17,584	0/0:21,0:19:17.26:0,17,602	0/0:25,0:25:39.13:0,39,1335	0/0:12,0:11:26.05:0,26,950	0/0:30,0:30:26.07:0,26,859	0/0:21,0:21:28.75:0,29,964	1/1:1,21:22:63.01:1100,63,0	0/0:20,0:19:36.01:0,36,1286	1/1:1,12:13:6.02:262,6,0
chr10	63562026	.	TTTTTGTTTTG	T	10099.93	PASS	AB=0.840;AC=36;AF=0.692;AN=52;BaseQRankSum=-0.778;DP=718;FS=7.597;HRun=0;HaplotypeScore=231.8221;InbreedingCoeff=0.8266;MQ=62.64;MQ0=7;MQRankSum=-8.476;QD=20.12;ReadPosRankSum=-0.019;VQSLOD=3.0632;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:30:18.06:419,18,0	0/0:5,0:13:24.05:0,24,248	./.	./.	1/1:21,0:39:21.07:417,21,0	1/1:10,11:21:18.06:528,18,0	1/1:13,7:20:6.02:176,6,0	0/0:26,0:25:12.03:0,12,189	0/0:8,0:18:21.04:0,21,212	1/1:18,15:33:39.07:974,39,0	1/1:11,9:20:12.04:352,12,0	1/1:15,10:25:21.07:616,21,0	1/1:27,0:27:14.71:348,15,0	1/1:8,10:18:26.88:791,27,0	1/1:14,20:33:45.15:1320,45,0	0/1:19,0:36:21.80:665,0,22	0/0:15,0:40:64:0,64,691	0/0:12,0:19:21.03:0,21,216	1/1:17,4:21:11.11:244,11,0	1/1:13,16:29:24:568,24,0	0/1:12,0:12:0:0,0,0	1/1:29,0:29:24.08:492,24,0	1/1:30,0:30:16.52:329,17,0	1/1:25,0:25:12.04:279,12,0	1/1:13,9:22:21.07:616,21,0	0/0:15,0:27:36.08:0,36,431	1/1:20,11:31:33.11:967,33,0	0/0:7,0:12:15.03:0,15,151
chr10	63562027	.	TTTTGTTTTGTTTTGTTTTG	T	4864.23	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=6.941;DP=714;FS=0.468;HRun=0;HaplotypeScore=355.2984;InbreedingCoeff=0.5328;MQ=62.58;MQ0=8;MQRankSum=-3.547;QD=17.69;ReadPosRankSum=0.559;VQSLOD=2.4600;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:30:99:227,0,537	0/0:13,0:13:39.10:0,39,1451	0/1:29,0:11:2.02:2,0,431	0/1:32,0:17:7.34:7,0,333	0/1:39,0:39:99:159,0,1033	0/0:21,0:21:45.10:0,45,912	0/0:20,0:20:39.08:0,39,783	0/0:26,0:25:23.88:0,24,1446	0/0:18,0:18:39.10:0,39,1431	0/0:32,0:32:84.23:0,84,1821	0/0:20,0:20:57.12:0,57,1012	0/0:25,0:25:63.17:0,63,1423	1/1:3,24:27:14.62:789,15,0	0/0:18,0:18:42.58:0,43,727	0/0:34,0:33:84.19:0,84,1266	0/1:35,0:35:99:395,0,713	0/0:40,0:40:99:0,99,3827	0/0:19,0:19:45.11:0,45,1469	0/0:22,0:21:54.11:0,54,1203	0/0:29,0:29:75.16:0,75,1441	0/0:11,0:11:33.04:0,33,578	1/1:1,27:28:60.15:1595,60,0	1/1:1,29:30:27.74:992,28,0	1/1:1,24:25:18.06:697,18,0	0/0:22,0:22:54.12:0,54,1004	0/0:27,0:27:78.20:0,78,2781	0/0:30,0:30:81.21:0,81,1434	0/0:12,0:12:36.06:0,36,957
chr10	63562185	.	TC	T	12537.21	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=12.041;DP=659;FS=3.104;HRun=5;HaplotypeScore=74.2063;InbreedingCoeff=0.9996;MQ=78.93;MQ0=1;MQRankSum=-2.556;QD=29.99;ReadPosRankSum=3.612;VQSLOD=5.5429;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:84.13:0,84,1051	0/0:12,0:12:30.10:0,30,405	0/0:21,0:21:44.56:0,45,648	0/0:21,0:21:37.63:0,38,520	0/0:26,0:26:69.20:0,69,898	1/1:3,24:27:63.17:708,63,0	1/1:4,26:30:75.21:851,75,0	0/0:21,0:21:51.16:0,51,682	0/0:21,0:21:57.19:0,57,777	1/1:0,18:18:48.09:521,48,0	1/1:0,13:13:36.04:392,36,0	1/1:0,31:31:93.27:1055,93,0	1/1:1,27:28:81.23:917,81,0	1/1:0,20:20:54.15:612,54,0	1/1:2,34:36:93.26:1055,93,0	1/1:1,23:24:60.17:680,60,0	0/0:21,0:21:60.20:0,60,821	0/0:30,0:30:84.28:0,84,1148	1/1:0,12:12:36.09:398,36,0	1/1:0,22:22:63.09:686,63,0	1/1:2,35:36:99:1122,99,0	1/1:0,25:25:72.14:800,72,0	1/1:0,19:19:54.15:612,54,0	1/1:2,24:26:66.15:734,66,0	1/1:1,16:17:42.12:476,42,0	0/0:26,0:26:75.18:0,75,962	1/1:1,32:33:81.23:918,81,0	0/0:10,0:10:24.08:0,24,328
chr10	63569970	.	C	CTT	4753.89	PASS	AB=0.580;AC=34;AF=0.607;AN=56;BaseQRankSum=-3.162;DP=671;FS=8.687;HRun=12;HaplotypeScore=98.8136;InbreedingCoeff=0.8195;MQ=68.02;MQ0=1;MQRankSum=0.099;QD=10.18;ReadPosRankSum=-1.969;VQSLOD=2.5716;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:25:35.61:0,36,413	1/1:4,3:8:12.03:155,12,0	0/0:14,0:14:18.28:0,18,204	0/0:7,0:7:2.87:0,3,27	0/0:30,0:33:32.37:0,32,462	1/1:7,1:32:22.36:188,22,0	1/1:6,0:26:10.17:93,10,0	1/1:9,16:30:58.53:617,59,0	1/1:5,28:36:28.33:627,28,0	1/1:6,1:23:19.60:191,20,0	1/1:2,1:15:26.89:158,27,0	1/1:13,0:31:59.92:298,60,0	0/0:2,0:24:55.91:0,56,246	1/1:7,0:24:33.04:129,33,0	1/1:2,4:21:39.95:274,40,0	0/1:8,0:37:16.89:132,0,17	1/1:6,20:28:25.89:637,26,0	1/1:0,13:15:29.58:373,30,0	1/1:12,0:32:30.51:176,31,0	0/1:9,1:27:6.65:179,0,7	1/1:9,2:32:11.71:176,12,0	0/0:3,0:20:38.34:0,38,166	0/0:1,0:23:48.39:0,48,212	0/0:2,0:18:43.91:0,44,190	1/1:4,1:15:26.91:159,27,0	0/0:23,0:25:25.05:0,25,440	1/1:7,1:32:41.41:189,41,0	0/0:14,0:14:39:0,39,361
chr10	63572198	.	GAC	G	3909.93	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=12.205;DP=877;FS=0.403;HRun=0;HaplotypeScore=100.9471;InbreedingCoeff=0.9999;MQ=86.07;MQ0=1;MQRankSum=-4.967;QD=36.89;ReadPosRankSum=3.233;VQSLOD=5.7671;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:59,0:58:99:0,169,3022	0/0:11,0:11:33.10:0,33,575	0/0:27,0:27:78.18:0,78,1391	0/0:29,0:29:83.06:0,83,1367	0/0:26,0:26:75.22:0,75,1312	0/0:16,0:16:48.15:0,48,848	0/0:31,0:31:81.28:0,81,1484	0/0:38,0:38:99:0,111,1954	0/0:39,0:39:99:0,111,2026	0/0:35,0:35:99:0,102,1846	0/0:21,0:21:60.21:0,60,1100	0/0:34,0:34:99:0,102,1855	1/1:3,31:33:84.28:1203,84,0	0/0:43,0:43:99:0,126,2264	0/0:38,0:38:99:0,105,1854	0/0:35,0:35:99:0,99,1805	0/0:40,0:40:99:0,117,2113	0/0:31,0:31:90.29:0,90,1608	0/0:30,0:30:78.27:0,78,1430	0/0:29,0:29:84.27:0,84,1485	0/0:44,0:44:99:0,126,2244	1/1:4,23:27:63.21:902,63,0	1/1:0,18:18:48.16:688,48,0	1/1:0,27:27:78.26:1117,78,0	0/0:28,0:28:84.29:0,84,1538	0/0:39,0:39:99:0,114,2053	0/0:29,0:29:87.30:0,87,1583	0/0:19,0:19:57.20:0,57,1044
chr10	63574393	.	T	TTGTGTGTGTG	14790.25	PASS	AB=1.000;AC=53;AF=0.946;AN=56;BaseQRankSum=0.082;DP=682;FS=1.249;HRun=0;HaplotypeScore=228.7954;InbreedingCoeff=0.4831;MQ=52.08;MQ0=14;MQRankSum=-2.717;QD=22.93;ReadPosRankSum=3.187;VQSLOD=3.9689;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:45,0:45:30.49:485,30,0	1/1:10,0:10:9.03:244,9,0	0/1:33,0:21:1.31:1,0,302	0/0:36,0:21:12.02:0,12,213	1/1:24,0:24:33.09:446,33,0	1/1:23,2:26:8.58:434,9,0	1/1:31,1:31:33.98:1023,34,0	1/1:37,0:30:48.12:1497,48,0	1/1:11,0:11:6.02:180,6,0	1/1:18,0:22:21.07:485,21,0	1/1:20,1:21:9.03:420,9,0	1/1:15,2:17:9.03:408,9,0	1/1:21,0:21:24.08:592,24,0	1/1:21,2:24:29.86:942,30,0	1/1:21,4:26:14.04:514,14,0	1/1:25,4:31:12.04:466,12,0	1/1:23,0:22:21:597,21,0	1/1:15,0:15:13.86:504,14,0	1/1:20,0:19:3.48:150,3,0	1/1:27,3:29:17.46:823,17,0	1/1:22,0:21:15.04:318,15,0	1/1:16,0:16:21.07:537,21,0	1/1:18,0:17:27.09:650,27,0	1/1:25,0:25:6.02:157,6,0	1/1:18,2:19:6.02:298,6,0	1/1:15,0:34:33.58:1296,34,0	1/1:19,1:24:31.12:1064,31,0	1/1:6,0:12:6.02:258,6,0
chr10	63574399	.	G	GTGTGTGTT	12827.53	PASS	AB=1.000;AC=37;AF=0.661;AN=56;BaseQRankSum=5.528;DP=720;FS=0.872;HRun=0;HaplotypeScore=216.3985;InbreedingCoeff=-0.2339;MQ=49.17;MQ0=14;MQRankSum=-7.559;QD=19.80;ReadPosRankSum=5.500;VQSLOD=3.9561;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:51,0:51:2.40:710,2,0	1/1:9,0:9:7.93:245,8,0	0/0:33,0:20:20.50:0,20,441	0/0:39,0:21:44.97:0,45,580	1/1:28,0:28:38.16:772,38,0	0/1:28,0:27:99:231,0,117	0/1:32,0:31:99:402,0,102	1/1:37,0:30:29.10:1137,29,0	1/1:11,0:11:1.92:288,2,0	0/1:24,0:22:99:451,0,109	0/1:20,0:20:36.86:154,0,37	0/1:17,0:17:72.45:72,0,74	1/1:5,15:30:24.08:968,24,0	0/1:24,0:24:99:494,0,106	0/1:25,0:25:99:332,0,133	0/1:33,0:33:99:134,0,219	1/1:23,0:22:21.90:658,22,0	0/1:15,0:15:5.22:377,0,5	0/1:19,0:17:42.14:42,0,252	0/1:26,0:25:61.79:507,0,62	0/1:24,0:23:99:142,0,114	1/1:4,13:27:26.94:940,27,0	1/1:3,13:25:26.93:1102,27,0	1/1:6,19:35:12.01:408,12,0	0/1:21,0:20:80.80:155,0,81	0/1:29,0:28:6.93:1484,0,7	0/1:25,0:25:99:408,0,111	1/1:9,0:8:6.02:213,6,0
chr10	63574401	.	G	GTGTGTT	7651.49	PASS	AB=1.000;AC=30;AF=0.536;AN=56;BaseQRankSum=5.779;DP=720;FS=2.387;HRun=0;HaplotypeScore=163.3117;InbreedingCoeff=-0.3795;MQ=48.68;MQ0=14;MQRankSum=-4.671;QD=12.18;ReadPosRankSum=6.165;VQSLOD=3.9172;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:13,42:61:10.48:1102,10,0	0/1:9,0:9:1.08:133,0,1	0/0:32,0:19:17.88:0,18,389	0/0:41,0:22:48:0,48,586	1/1:6,22:28:48.61:1114,49,0	0/1:29,0:28:95.82:96,0,141	0/1:31,0:30:67.17:67,0,138	0/1:37,0:30:99:423,0,127	0/1:11,0:11:1.09:183,0,1	0/1:23,0:21:99:221,0,145	0/1:19,0:19:47.60:48,0,82	0/1:17,0:17:46.43:46,0,68	1/1:29,0:29:3.15:638,3,0	0/1:24,0:24:99:162,0,102	0/1:24,0:24:99:151,0,151	0/1:33,0:33:79.43:79,0,240	0/1:23,0:22:0.07:313,0,0	0/1:15,0:15:68.90:69,0,96	0/0:19,0:17:41.41:0,41,310	0/1:25,0:24:70.82:162,0,71	0/1:25,0:24:55.42:55,0,115	0/1:27,0:27:39.96:545,0,40	1/1:24,1:24:27.09:765,27,0	1/1:31,0:31:12.01:268,12,0	0/1:21,0:20:80.80:103,0,81	0/1:30,0:29:99:619,0,202	0/1:24,0:24:99:216,0,173	0/1:7,0:6:18.92:74,0,19
chr10	63574702	.	G	GA	6591.38	PASS	AB=0.676;AC=30;AF=0.536;AN=56;BaseQRankSum=-11.309;DP=646;FS=2.083;HRun=12;HaplotypeScore=83.1828;InbreedingCoeff=0.4160;MQ=65.84;MQ0=0;MQRankSum=-0.142;QD=13.91;ReadPosRankSum=-0.511;VQSLOD=5.1099;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,25:34:10.38:409,10,0	0/0:11,0:11:23.79:0,24,172	0/1:11,0:9:7.33:38,0,7	0/0:7,0:7:10.74:0,11,61	1/1:14,16:30:26.15:407,26,0	0/1:10,13:23:7.76:256,0,8	1/1:6,16:23:32.01:459,32,0	0/0:25,0:27:50.45:0,50,360	1/1:4,20:25:50.92:481,51,0	1/1:10,23:34:38.02:518,38,0	1/1:3,14:17:32.99:304,33,0	1/1:13,9:23:7.09:374,7,0	0/0:5,0:26:41.66:0,42,133	1/1:1,19:22:6.46:288,6,0	1/1:12,27:40:23.37:528,23,0	0/1:9,24:33:34.60:509,0,35	0/0:14,1:17:4.64:0,5,179	0/0:27,0:28:73.54:0,74,516	0/1:11,5:16:35.74:137,0,36	1/1:11,20:32:10.81:414,11,0	1/1:6,10:16:8.56:232,9,0	0/0:3,0:17:29.44:0,29,98	0/0:5,0:22:30.54:0,31,88	0/0:1,0:17:28.51:0,29,82	0/1:6,14:21:1.92:293,0,2	0/1:10,15:27:18.27:315,0,18	0/1:10,27:39:25.62:543,0,26	0/1:3,3:7:7.05:87,0,7
chr10	63575643	.	T	TC	23136.44	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-7.091;DP=613;FS=7.181;HRun=1;HaplotypeScore=55.1634;InbreedingCoeff=0.9861;MQ=79.05;MQ0=0;MQRankSum=-7.929;QD=39.55;ReadPosRankSum=4.907;VQSLOD=5.1241;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,19:19:57.19:853,57,0	1/1:0,10:10:27.01:376,27,0	0/0:16,0:16:32.23:0,32,388	0/0:12,0:12:26.44:0,26,304	1/1:0,25:25:72:981,72,0	1/1:0,18:18:54.18:809,54,0	1/1:0,17:17:30.10:449,30,0	1/1:4,37:41:99:1464,102,0	1/1:0,30:30:84.28:1258,84,0	1/1:2,24:26:69.23:1027,69,0	1/1:1,27:28:78.18:1128,78,0	1/1:0,20:20:57.19:854,57,0	1/1:0,17:18:54.18:800,54,0	1/1:0,23:23:54.18:809,54,0	1/1:0,31:31:81.27:1213,81,0	1/1:0,19:19:54.18:809,54,0	1/1:0,13:13:36.12:539,36,0	1/1:0,8:8:18.06:270,18,0	1/1:1,17:18:51.15:729,51,0	1/1:1,28:29:78.20:1140,78,0	1/1:0,26:26:69.23:1034,69,0	1/1:1,23:24:63.14:902,63,0	1/1:0,26:26:69.15:1003,69,0	1/1:0,13:13:36.12:539,36,0	1/1:0,33:33:93.32:1393,93,0	1/1:1,24:25:75.19:1056,75,0	1/1:2,35:38:99:1477,99,0	1/1:0,7:7:15.05:224,15,0
chr10	63576545	.	CT	C	759.92	PASS	AB=0.894;AC=7;AF=0.125;AN=56;BaseQRankSum=-4.691;DP=579;FS=1.095;HRun=13;HaplotypeScore=85.9482;InbreedingCoeff=0.2093;MQ=71.81;MQ0=2;MQRankSum=1.174;QD=5.71;ReadPosRankSum=0.196;VQSLOD=2.4930;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:10,19:29:5.57:296,0,6	0/0:7,0:7:15.02:0,15,146	0/0:16,0:13:5.22:0,5,140	0/1:15,0:14:13.65:14,0,46	1/1:8,26:35:77.59:529,78,0	0/0:20,0:20:43.29:0,43,238	0/0:11,0:11:8.74:0,9,53	0/0:34,0:35:66.36:0,66,605	0/0:10,0:10:22.28:0,22,208	0/0:20,0:20:26.61:0,27,166	0/0:23,0:23:48.69:0,49,266	0/0:27,0:27:37.89:0,38,272	0/0:16,0:16:29.17:0,29,128	0/0:24,0:24:48.70:0,49,270	0/0:23,0:23:45.97:0,46,242	0/0:20,0:20:29.47:0,29,226	0/0:24,0:24:60.06:0,60,567	0/0:16,2:19:7.19:0,7,374	0/0:21,0:21:45.64:0,46,237	0/0:20,0:20:43.23:0,43,246	0/0:13,0:13:23.12:0,23,127	0/1:21,0:21:35.46:35,0,98	0/1:19,0:19:4.81:5,0,107	0/1:11,1:12:12.12:12,0,83	0/0:24,0:24:60.54:0,61,343	0/0:33,0:33:56.99:0,57,522	0/0:30,0:30:63.06:0,63,331	0/0:9,0:10:4.97:0,5,197
chr10	63576558	.	T	TA	7232.12	PASS	AB=1.000;AC=35;AF=0.625;AN=56;BaseQRankSum=-6.279;DP=565;FS=1.609;HRun=3;HaplotypeScore=66.5723;InbreedingCoeff=0.9379;MQ=73.15;MQ0=3;MQRankSum=-1.197;QD=20.31;ReadPosRankSum=2.718;VQSLOD=4.6392;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:79.90:0,80,560	0/0:7,0:7:21.03:0,21,227	0/0:20,0:16:29.15:0,29,238	0/1:17,0:14:1.50:2,0,129	0/0:31,0:31:76.50:0,76,482	1/1:1,21:22:42.07:505,42,0	1/1:1,7:8:6.02:75,6,0	0/0:31,0:31:71.70:0,72,748	0/0:11,0:11:27.06:0,27,299	1/1:2,16:18:44.96:436,45,0	1/1:12,11:23:55.35:597,55,0	1/1:3,21:28:54.14:643,54,0	1/1:12,0:12:22.19:131,22,0	1/1:2,21:24:42.11:508,42,0	1/1:1,21:23:48.14:586,48,0	1/1:3,17:22:44.89:509,45,0	0/0:22,0:22:60.12:0,60,664	0/0:18,0:18:44.97:0,45,474	1/1:2,20:22:60.05:665,60,0	1/1:4,17:22:52.77:533,53,0	1/1:2,15:17:22.86:257,23,0	1/1:19,0:19:29.78:121,30,0	1/1:15,1:16:25.15:151,25,0	1/1:12,0:12:19.57:115,20,0	1/1:4,20:25:52.35:609,52,0	0/0:22,0:22:48.01:0,48,510	1/1:1,24:25:65.02:791,65,0	0/0:15,0:15:28.91:0,29,292
chr10	63576664	.	AGATGCCCAT	A	14733.19	PASS	AB=0.983;AC=28;AF=0.500;AN=56;BaseQRankSum=15.607;DP=528;FS=6.225;HRun=0;HaplotypeScore=155.0060;InbreedingCoeff=0.8387;MQ=89.52;MQ0=0;MQRankSum=-16.872;QD=56.02;ReadPosRankSum=4.515;VQSLOD=4.4293;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:78.27:0,78,3591	0/1:8,0:8:32.94:33,0,765	0/0:16,0:16:42.14:0,42,1729	0/0:31,0:31:84.28:0,84,3045	0/0:19,0:19:57.18:0,57,2573	1/1:1,16:17:39.13:1151,39,0	1/1:3,10:12:18.06:558,18,0	0/0:28,0:28:81.27:0,81,3417	0/0:14,0:14:42.14:0,42,1900	1/1:2,15:16:42.13:1132,42,0	1/1:0,10:10:21.07:638,21,0	1/1:2,21:23:45.15:1395,45,0	0/0:14,0:14:42.14:0,42,1912	1/1:2,13:15:39.13:1209,39,0	1/1:1,23:24:60.21:1834,60,0	1/1:2,15:17:33.11:1023,33,0	0/0:22,0:22:66.23:0,66,2926	0/0:20,0:20:60.21:0,60,2527	1/1:0,10:10:27.09:837,27,0	1/1:3,16:19:45.15:1395,45,0	1/1:2,5:7:3.01:76,3,0	0/0:18,0:18:54.19:0,54,2635	0/0:20,0:20:60.19:0,60,2797	0/0:29,0:28:87.30:0,87,3778	1/1:3,21:24:48.16:1488,48,0	0/1:27,1:27:8.78:9,0,3728	1/1:5,26:30:63.22:1954,63,0	0/0:8,0:8:18.06:0,18,882
chr10	63578623	.	T	TA	2484.40	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=-8.690;DP=535;FS=3.995;HRun=9;HaplotypeScore=61.3495;InbreedingCoeff=0.8906;MQ=68.78;MQ0=2;MQRankSum=-0.442;QD=21.23;ReadPosRankSum=1.043;VQSLOD=4.4343;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,14:15:33.09:365,33,0	0/0:13,0:13:35.97:0,36,307	0/1:16,0:11:6.87:7,0,41	0/0:23,1:14:16.70:0,17,124	1/1:3,26:30:78.04:844,78,0	0/0:20,0:20:53.99:0,54,469	0/0:17,0:17:50.96:0,51,434	0/0:26,0:26:40.77:0,41,514	0/0:17,0:17:8.75:0,9,300	0/0:29,0:29:74.95:0,75,644	0/0:31,0:31:71.97:0,72,625	0/0:19,0:19:53.99:0,54,469	1/1:2,14:17:41.95:446,42,0	0/0:14,0:14:38.98:0,39,337	0/0:22,0:22:53.96:0,54,465	0/0:15,0:15:38.99:0,39,338	0/0:20,0:20:47.89:0,48,399	0/0:21,0:21:53.99:0,54,469	0/0:13,0:13:29.96:0,30,255	0/0:25,0:26:71.02:0,71,605	0/0:16,0:16:35.98:0,36,313	1/1:2,10:13:32.92:346,33,0	1/1:2,21:23:51.14:564,51,0	1/1:0,3:3:9.02:100,9,0	0/0:24,1:25:32.76:0,33,505	0/0:14,0:14:35.99:0,36,313	0/0:25,0:25:59.19:0,59,497	0/0:10,0:10:29.99:0,30,260
chr10	63580819	.	A	AAGGAGGATCTTAACATCAC	12807.31	PASS	AB=0.680;AC=9;AF=0.161;AN=56;BaseQRankSum=0.258;DP=466;FS=11.220;HRun=0;HaplotypeScore=226.8527;InbreedingCoeff=0.8559;MQ=89.81;MQ0=0;MQRankSum=-12.167;QD=162.12;ReadPosRankSum=1.212;VQSLOD=3.3289;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:54.15:0,54,2349	1/1:5,4:9:24.08:1861,24,0	0/0:16,0:16:30.09:0,30,1190	0/0:28,0:27:69.22:0,69,2079	0/0:10,0:10:27.09:0,27,1252	0/0:22,0:22:63.20:0,63,2744	0/0:13,0:13:33.11:0,33,1687	1/1:23,0:22:63.22:3435,63,0	0/1:9,7:17:99:3301,0,114	0/0:6,0:6:18.06:0,18,948	0/0:14,0:14:24.08:0,24,998	0/0:27,0:27:75.26:0,75,3677	0/0:22,0:22:57.18:0,57,2819	0/0:25,0:25:72.22:0,72,3282	0/0:21,0:21:54.17:0,54,2507	0/0:23,0:23:66.22:0,66,3289	1/1:14,6:23:48.16:3563,48,0	1/1:7,0:6:15.05:648,15,0	0/0:14,0:14:30.07:0,30,1276	0/0:13,0:13:27.09:0,27,1244	0/0:23,0:23:57.20:0,57,2687	0/0:8,0:8:24.08:0,24,1052	0/0:6,0:6:18.06:0,18,822	0/0:13,0:13:39.12:0,39,1904	0/0:19,0:19:48.12:0,48,1673	0/0:12,0:12:27.07:0,27,1125	0/0:22,0:22:54.18:0,54,2810	0/0:8,0:8:20.28:0,20,869
chr10	63586425	.	CT	C	490.26	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=4.090;DP=455;FS=2.230;HRun=5;HaplotypeScore=52.2276;InbreedingCoeff=0.9793;MQ=77.50;MQ0=1;MQRankSum=-1.551;QD=25.80;ReadPosRankSum=0.076;VQSLOD=2.6447;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:81.15:0,81,1023	0/0:7,0:7:21.07:0,21,281	0/0:31,0:18:50.73:0,51,589	0/0:30,1:23:53.86:0,54,693	0/0:22,0:22:63.21:0,63,854	0/0:18,0:18:51.17:0,51,697	0/0:19,0:19:57.19:0,57,779	0/0:33,0:33:84.27:0,84,1133	0/0:13,0:13:39.13:0,39,532	0/0:10,0:10:30.10:0,30,410	0/0:11,0:11:30.09:0,30,392	0/0:13,0:13:39.13:0,39,529	0/0:13,0:13:39.12:0,39,517	0/0:6,0:6:15.05:0,15,203	0/0:12,0:12:33.11:0,33,451	0/0:5,0:5:15.05:0,15,205	0/0:19,0:19:51.16:0,51,681	0/0:12,0:12:33.11:0,33,450	0/0:10,0:10:30.10:0,30,410	0/0:18,0:18:51.16:0,51,680	0/0:21,0:21:63.21:0,63,857	0/0:15,0:15:42.14:0,42,569	0/0:21,0:21:63.19:0,63,830	0/0:16,0:16:42.14:0,42,574	0/0:12,0:12:36.12:0,36,492	1/1:0,10:10:30.09:339,30,0	0/0:20,0:20:60.20:0,60,820	1/1:0,9:9:24.07:272,24,0
chr10	63587566	.	A	AT	1528.15	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-6.561;DP=584;FS=0.000;HRun=10;HaplotypeScore=64.8416;InbreedingCoeff=0.8776;MQ=68.99;MQ0=2;MQRankSum=1.263;QD=19.85;ReadPosRankSum=0.653;VQSLOD=4.4453;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:77.53:0,78,741	0/0:9,0:9:23.97:0,24,197	0/0:14,0:12:5.09:0,5,41	0/0:22,0:9:10.73:0,11,86	0/0:24,0:24:65.91:0,66,540	0/0:13,1:14:0.95:0,1,211	0/0:21,0:21:44.90:0,45,363	0/0:35,0:34:73.15:0,73,594	0/0:12,0:12:32.93:0,33,265	0/0:23,0:23:59.93:0,60,493	0/0:17,0:17:50.93:0,51,416	0/0:16,0:16:38.94:0,39,317	1/1:2,13:15:8.45:295,8,0	0/0:15,0:15:32.93:0,33,268	0/0:14,0:15:34.99:0,35,277	0/0:20,0:20:47.94:0,48,394	0/0:27,0:27:74.91:0,75,616	0/0:30,0:29:62.06:0,62,516	0/0:23,0:24:26.28:0,26,395	0/0:25,0:28:75.98:0,76,600	0/0:15,0:15:41.95:0,42,345	1/1:5,18:23:44.53:494,45,0	1/1:2,18:20:31.94:350,32,0	1/1:1,18:19:51.13:544,51,0	0/0:24,1:25:30.93:0,31,460	0/0:22,0:22:56.89:0,57,462	0/0:19,0:21:54.65:0,55,430	0/0:21,0:22:64.97:0,65,523
chr10	63589066	.	GTCAT	G	604.91	PASS	AB=1.000;AC=12;AF=0.231;AN=52;BaseQRankSum=-1.372;DP=292;FS=8.154;HRun=0;HaplotypeScore=68.8779;InbreedingCoeff=0.5215;MQ=74.48;MQ0=1;MQRankSum=0.114;QD=5.60;ReadPosRankSum=0.977;VQSLOD=0.5605;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:18,0:18:0:0,0,0	0/1:5,0:5:25.99:38,0,26	0/0:8,0:8:9.01:0,9,83	0/0:10,0:9:7.62:0,8,46	1/1:10,0:10:23.85:180,24,0	0/0:13,0:13:32.88:0,33,500	./.	0/0:15,0:15:23.99:0,24,213	0/0:6,0:6:11.82:0,12,76	0/0:11,0:11:27.05:0,27,388	0/0:10,0:10:24:0,24,296	0/0:6,0:6:11.93:0,12,93	1/1:8,0:8:2.97:20,3,0	0/0:7,0:7:21.02:0,21,310	0/0:9,0:9:20.93:0,21,176	0/0:7,0:7:18.01:0,18,223	0/1:22,0:21:99:113,0,118	0/1:22,0:22:37.65:38,0,126	0/0:16,0:16:41.90:0,42,392	0/0:16,0:16:41.85:0,42,413	0/0:9,0:9:23.95:0,24,286	0/0:5,0:5:8.95:0,9,69	0/0:6,0:6:5.12:0,5,48	./.	0/0:11,0:11:23.85:0,24,182	1/1:5,4:8:12:125,12,0	0/0:16,0:16:26.99:0,27,408	1/1:14,0:14:26.97:246,27,0
chr10	63589080	.	CATTCATTTATTTATTT	C	363.54	PASS	AB=1.000;AC=6;AF=0.115;AN=52;BaseQRankSum=-3.836;DP=264;FS=2.124;HRun=0;HaplotypeScore=124.9696;InbreedingCoeff=0.4199;MQ=63.81;MQ0=3;MQRankSum=-0.851;QD=6.99;ReadPosRankSum=0.105;VQSLOD=2.4631;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:3,17:20:3.01:89,3,0	0/0:6,0:6:11.93:0,12,313	0/0:4,0:4:9.01:0,9,83	0/0:7,0:6:7.62:0,8,46	1/1:10,0:10:23.90:257,24,0	0/0:16,0:16:28.97:0,29,1518	./.	0/0:11,0:9:23.99:0,24,213	0/0:5,0:5:11.89:0,12,147	0/0:9,0:9:27.06:0,27,813	0/0:8,0:8:24:0,24,537	0/0:6,0:6:15.01:0,15,298	0/0:2,0:2:3.01:0,3,129	0/0:8,0:8:24.04:0,24,849	0/0:8,0:8:23.97:0,24,502	0/0:8,0:8:24.04:0,24,618	0/0:24,0:24:41.91:0,42,1163	0/0:19,0:19:9.05:0,9,620	0/0:16,0:16:44.98:0,45,862	0/0:16,0:15:41.92:0,42,798	0/0:8,0:8:23.96:0,24,606	0/0:4,0:4:11.96:0,12,234	0/0:4,0:4:8.99:0,9,148	./.	0/0:10,0:10:29.95:0,30,455	0/1:7,0:6:36.93:37,0,183	0/0:12,0:12:27.04:0,27,931	0/1:15,0:15:99:104,0,982
chr10	63589084	.	CATTT	C	719.35	PASS	AB=0.981;AC=26;AF=0.565;AN=46;BaseQRankSum=-3.724;DP=250;FS=5.000;HRun=0;HaplotypeScore=66.0645;InbreedingCoeff=0.2445;MQ=64.15;MQ0=3;MQRankSum=0.703;QD=4.26;ReadPosRankSum=-2.213;VQSLOD=0.6910;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:18:2.96:19,3,0	1/1:2,4:6:6.02:93,6,0	./.	./.	0/1:7,0:8:0:0,0,0	0/1:16,0:16:48.02:48,0,238	./.	1/1:12,0:10:6:51,6,0	./.	0/0:9,0:9:9.03:0,9,137	0/0:7,0:7:6.02:0,6,102	1/1:6,0:6:2.99:24,3,0	1/1:1,0:1:3.01:45,3,0	0/0:8,0:8:9.92:0,10,139	0/1:8,0:8:12:12,0,12	0/1:7,0:7:25.86:26,0,68	1/1:9,15:24:21.06:306,21,0	1/1:8,11:19:8.96:112,9,0	0/0:16,0:16:6.02:0,6,96	0/0:16,0:15:6.02:0,6,92	0/0:8,0:8:6.02:0,6,96	0/0:3,0:3:2.98:0,3,21	1/1:3,0:3:3:27,3,0	./.	1/1:11,0:11:8.90:62,9,0	1/1:5,0:4:2.97:23,3,0	0/1:11,0:11:8.46:8,0,197	0/1:14,0:14:9.22:9,0,112
chr10	63599216	.	AAAAAG	A	3060.19	PASS	AB=1.000;AC=37;AF=0.661;AN=56;BaseQRankSum=-4.572;DP=406;FS=9.978;HRun=0;HaplotypeScore=81.8490;InbreedingCoeff=0.2211;MQ=71.32;MQ0=1;MQRankSum=-2.157;QD=9.13;ReadPosRankSum=0.773;VQSLOD=1.3400;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:37.52:0,38,797	0/1:8,0:8:2.86:3,0,23	0/1:14,0:11:41.98:42,0,100	0/1:15,0:9:15.59:16,0,29	0/1:16,0:16:38.90:39,0,336	1/1:14,0:14:17.83:169,18,0	1/1:10,1:11:8.98:82,9,0	0/1:18,0:17:46.18:168,0,46	1/1:10,2:12:8.98:112,9,0	1/1:17,2:19:35.14:464,35,0	1/1:15,1:16:8.30:125,8,0	1/1:12,0:11:6.01:62,6,0	0/0:7,0:7:11.94:0,12,148	1/1:16,1:17:5.92:39,6,0	1/1:23,1:24:10.22:84,10,0	1/1:14,1:15:15.51:185,16,0	0/1:16,0:16:7.10:7,0,9	0/1:16,0:16:83.77:91,0,84	1/1:9,3:12:21.66:423,22,0	1/1:20,1:21:37.17:265,37,0	1/1:7,0:7:9.91:97,10,0	0/0:16,0:16:5.12:0,5,468	0/1:10,0:10:38.27:38,0,149	0/0:11,0:11:12.04:0,12,199	1/1:11,3:14:35.48:377,35,0	0/1:14,0:14:24.67:25,0,240	1/1:13,1:14:38.63:329,39,0	0/0:5,0:5:4.89:0,5,81
chr10	63599217	.	AAAAG	A	4624.46	PASS	AB=0.976;AC=41;AF=0.732;AN=56;BaseQRankSum=-6.786;DP=407;FS=5.731;HRun=0;HaplotypeScore=71.3072;InbreedingCoeff=0.2300;MQ=68.03;MQ0=1;MQRankSum=-1.711;QD=13.56;ReadPosRankSum=-0.285;VQSLOD=3.3357;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:21.45:0,21,446	1/1:9,0:9:2.64:37,3,0	0/1:13,0:10:49.37:49,0,58	0/1:13,0:7:18.32:18,0,19	0/1:16,0:16:78.94:79,0,204	1/1:1,13:14:18.05:302,18,0	1/1:1,9:10:8.99:130,9,0	1/1:19,1:19:22.52:277,23,0	1/1:4,7:11:8.99:119,9,0	1/1:4,15:19:46.85:523,47,0	1/1:11,6:17:37.84:237,38,0	1/1:1,10:10:6.02:109,6,0	0/0:7,0:7:9.83:0,10,89	1/1:1,15:16:5.92:39,6,0	1/1:3,21:24:10.80:133,11,0	1/1:2,13:15:18.02:283,18,0	1/1:16,0:16:2.99:28,3,0	0/1:14,2:16:8.35:262,0,8	1/1:9,3:12:33.97:455,34,0	1/1:2,19:21:41.61:389,42,0	1/1:1,6:7:10.28:170,10,0	0/0:16,0:16:4.09:0,4,282	0/1:9,0:9:50.28:50,0,74	0/0:11,0:11:12.04:0,12,142	1/1:10,4:14:41.87:472,42,0	0/1:16,1:17:93.22:93,0,97	1/1:13,1:14:38.84:350,39,0	0/1:7,0:7:19.02:19,0,29
chr10	63599218	.	AAAG	A	5106.47	PASS	AB=1.000;AC=47;AF=0.839;AN=56;BaseQRankSum=-4.441;DP=417;FS=2.168;HRun=0;HaplotypeScore=66.4713;InbreedingCoeff=0.0238;MQ=68.69;MQ0=2;MQRankSum=-1.390;QD=12.58;ReadPosRankSum=-0.462;VQSLOD=4.4098;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:33:70.05:70,0,157	1/1:9,1:10:11.20:101,11,0	0/1:14,0:9:47.98:50,0,48	0/1:15,0:9:5.86:34,0,6	0/1:16,0:16:87.97:115,0,88	1/1:13,1:14:18.06:248,18,0	1/1:10,0:10:8.99:99,9,0	1/1:21,0:20:50.05:437,50,0	1/1:11,0:11:8.99:98,9,0	1/1:19,0:19:48.02:480,48,0	1/1:16,2:18:46.83:348,47,0	1/1:10,1:10:6.02:79,6,0	0/1:8,0:8:17.17:17,0,31	1/1:16,0:16:5.92:39,6,0	1/1:23,0:23:11.02:104,11,0	1/1:15,0:15:18.02:215,18,0	1/1:14,1:15:5.41:69,5,0	1/1:16,2:18:34.11:388,34,0	1/1:12,0:12:36.06:405,36,0	1/1:20,1:21:41.62:366,42,0	1/1:7,0:7:10.58:124,11,0	0/1:16,0:16:9.29:9,0,104	0/1:9,0:9:9.95:62,0,10	0/0:11,0:11:11.90:0,12,85	1/1:13,1:14:41.87:432,42,0	1/1:17,1:18:2.22:268,2,0	1/1:14,1:15:41.80:371,42,0	1/1:7,0:7:7.90:79,8,0
chr10	63599645	.	C	CT	12207.16	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=0.956;DP=699;FS=11.155;HRun=4;HaplotypeScore=79.2164;InbreedingCoeff=0.9960;MQ=89.85;MQ0=0;MQRankSum=-3.764;QD=34.68;ReadPosRankSum=2.985;VQSLOD=4.8087;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,111,1237	0/0:11,0:11:30.09:0,30,340	0/0:26,0:26:66.14:0,66,715	0/0:27,0:27:56.74:0,57,705	0/0:17,0:17:48.14:0,48,544	1/1:2,19:21:54.18:738,54,0	1/1:7,30:37:78.26:1061,78,0	0/0:40,0:40:99:0,108,1198	0/0:24,0:24:66.19:0,66,748	1/1:1,25:26:72.23:968,72,0	1/1:2,15:17:39.13:533,39,0	1/1:2,32:34:87.29:1186,87,0	0/0:32,0:32:84.22:0,84,943	1/1:2,18:20:51.17:697,51,0	1/1:1,35:36:99:1355,99,0	1/1:0,39:39:99:1437,105,0	0/0:25,0:25:72.16:0,72,795	0/0:28,0:28:78.22:0,78,884	1/1:3,20:23:63.20:847,63,0	1/1:1,18:19:45.11:594,45,0	1/1:4,22:26:63.21:862,63,0	0/0:17,0:17:42.12:0,42,476	0/0:12,0:12:33.09:0,33,374	0/0:20,0:20:54.15:0,54,612	1/1:1,22:23:63.21:862,63,0	0/0:21,1:22:16.17:0,16,567	1/1:3,28:31:78.26:1067,78,0	0/0:5,0:5:15.04:0,15,170
chr10	63686199	.	T	TA	543.25	PASS	AB=0.711;AC=10;AF=0.185;AN=54;BaseQRankSum=1.890;DP=410;FS=0.000;HRun=15;HaplotypeScore=55.6372;InbreedingCoeff=0.1062;MQ=53.48;MQ0=8;MQRankSum=1.720;QD=4.98;ReadPosRankSum=-1.747;VQSLOD=1.1997;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:9,15:25:11.66:225,0,12	0/1:3,4:7:12.46:19,0,12	./.	0/0:5,0:2:2.15:0,2,7	1/1:5,15:21:33.24:251,33,0	0/0:21,0:21:36.45:0,36,230	0/0:6,0:7:7.72:0,8,42	0/0:32,1:32:11.49:0,11,156	0/0:9,0:9:2.58:0,3,18	0/0:20,0:21:23.60:0,24,135	0/0:11,0:11:16.56:0,17,94	0/1:5,0:4:0:0,0,0	0/1:2,8:10:9:41,0,9	0/0:9,0:9:9.83:0,10,69	0/0:9,0:9:17.36:0,17,101	0/0:6,0:6:8.70:0,9,54	0/0:33,1:35:37.24:0,37,327	0/0:25,5:28:7:0,7,151	0/0:14,1:17:1.67:0,2,113	0/0:15,0:16:31.27:0,31,182	0/0:10,0:10:7.81:0,8,41	0/1:2,4:6:7.58:8,0,27	0/1:7,3:9:11.25:19,0,11	0/1:4,3:7:1.37:67,0,1	0/1:14,4:18:49.01:49,0,81	0/0:13,0:14:23.39:0,23,143	0/0:20,1:21:5.68:0,6,125	0/0:14,0:14:0.62:0,1,105
chr10	63686941	.	C	CATTTTGT	1924.19	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-3.687;DP=487;FS=7.808;HRun=0;HaplotypeScore=118.7857;InbreedingCoeff=0.9693;MQ=74.77;MQ0=0;MQRankSum=-3.166;QD=62.07;ReadPosRankSum=-6.134;VQSLOD=1.5867;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:18:30.08:0,30,685	0/0:7,0:7:15.01:0,15,281	0/0:17,0:17:21.46:0,21,794	0/0:12,0:12:24.07:0,24,538	0/0:30,0:30:63.20:0,63,1515	0/0:10,0:10:30.09:0,30,687	0/0:19,0:19:48.16:0,48,1142	1/1:21,7:31:63.18:2019,63,0	0/0:9,0:9:27.09:0,27,662	0/0:12,0:12:30.10:0,30,736	0/0:17,0:17:42.13:0,42,981	0/0:14,0:14:24.08:0,24,567	0/0:10,0:10:24.08:0,24,588	0/0:12,0:12:36.12:0,36,882	0/0:11,0:11:30.09:0,30,684	0/0:16,0:16:39.13:0,39,955	0/0:19,0:19:54.19:0,54,1323	0/0:12,0:12:30.10:0,30,724	0/0:21,0:21:57.20:0,57,1382	0/0:27,0:27:69.24:0,69,1692	0/0:19,0:19:39.13:0,39,906	0/0:17,0:17:39.13:0,39,956	0/0:24,0:24:60.19:0,60,1385	0/0:12,0:12:24.07:0,24,540	0/0:20,0:20:48.16:0,48,1154	0/0:19,0:19:51.17:0,51,1250	0/0:24,0:24:51.16:0,51,1171	0/0:27,0:27:66.23:0,66,1618
chr10	63686982	.	C	CTTTTCTTTCTTCCTTT	2182.28	PASS	AB=0.994;AC=18;AF=0.321;AN=56;BaseQRankSum=9.388;DP=384;FS=23.535;HRun=0;HaplotypeScore=177.8421;InbreedingCoeff=-0.1834;MQ=58.82;MQ0=3;MQRankSum=-8.160;QD=10.29;ReadPosRankSum=0.877;VQSLOD=1.3044;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:7,8:14:6.36:231,6,0	1/1:4,0:4:9.03:327,9,0	0/0:13,0:10:10.21:0,10,164	0/0:12,0:9:8.18:0,8,244	0/1:26,0:26:70.49:70,0,305	0/1:5,0:5:2.72:3,0,90	0/0:12,0:12:21.92:0,22,220	0/0:26,0:26:8.92:0,9,560	0/0:8,0:8:17.49:0,17,167	0/1:7,0:7:16.44:137,0,16	0/1:14,0:14:27.26:27,0,244	0/1:9,0:9:99:131,0,137	0/0:6,0:6:12.04:0,12,217	0/1:9,0:9:9.70:10,0,160	0/1:8,0:8:67.32:261,0,67	0/0:9,0:9:8.80:0,9,247	0/1:15,0:15:98.63:99,0,209	0/1:9,0:10:99:338,0,108	0/1:17,0:17:32.82:33,0,332	0/1:22,0:22:99:176,0,373	0/0:10,0:10:18.86:0,19,223	0/0:17,0:17:45.14:0,45,1474	0/0:24,0:24:63.20:0,63,1885	0/0:13,0:13:33.48:0,33,872	0/1:16,0:16:99:192,0,255	0/1:16,0:15:23.57:24,0,235	0/1:18,0:18:99:288,0,304	0/0:21,0:21:19.33:0,19,526
chr10	63686983	.	T	TTTTCTTTC	4879.36	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=1.744;DP=396;FS=49.534;HRun=0;HaplotypeScore=113.3379;InbreedingCoeff=0.7098;MQ=57.98;MQ0=4;MQRankSum=-2.911;QD=16.05;ReadPosRankSum=1.021;VQSLOD=1.4115;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:15:8.56:230,9,0	1/1:4,0:4:9.03:128,9,0	0/0:15,0:10:1.82:0,2,55	0/0:15,0:9:3.01:0,3,46	1/1:15,12:28:14.94:383,15,0	1/1:5,0:5:2.99:36,3,0	1/1:12,0:12:1.96:82,2,0	1/1:26,0:26:23.96:296,24,0	1/1:8,0:8:11.94:159,12,0	1/1:8,0:8:15.05:283,15,0	1/1:14,0:14:17.92:224,18,0	1/1:9,0:9:15.05:268,15,0	0/0:6,0:6:3.01:0,3,75	1/1:9,0:9:15.02:167,15,0	1/1:8,0:8:9.78:79,10,0	1/1:9,0:9:0.44:1,0,0	1/1:15,0:15:17.88:175,18,0	1/1:12,0:12:17.40:319,17,0	1/1:16,0:16:9.03:194,9,0	1/1:24,0:23:39.55:669,40,0	1/1:10,0:10:8.94:91,9,0	0/0:17,0:17:36.12:0,36,752	0/0:24,0:24:45.15:0,45,847	0/0:14,0:14:21.07:0,21,414	1/1:15,0:15:24.08:403,24,0	1/1:16,0:15:21.06:282,21,0	1/1:19,0:18:17.54:177,18,0	1/1:21,0:21:15.02:236,15,0
chr10	63687014	.	T	TC	1082.45	PASS	AB=0.989;AC=21;AF=0.375;AN=56;BaseQRankSum=1.393;DP=445;FS=0.501;HRun=0;HaplotypeScore=77.5448;InbreedingCoeff=-0.2831;MQ=51.61;MQ0=18;MQRankSum=-2.339;QD=4.61;ReadPosRankSum=0.482;VQSLOD=3.3371;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:11,0:11:2.05:2,0,27	1/1:3,2:5:9:70,9,0	0/0:59,0:15:7.40:0,7,84	0/0:43,0:11:14.85:0,15,139	0/0:25,0:24:26.26:0,26,319	0/1:7,0:7:6.17:6,0,36	0/1:7,0:7:15.29:15,0,90	0/1:22,1:23:99:121,0,159	0/1:7,0:7:33.02:60,0,33	0/1:10,1:11:57.51:66,0,58	0/1:14,1:15:87.93:88,0,105	0/1:12,0:12:34.87:35,0,52	0/0:8,0:8:12:0,12,137	0/1:8,0:8:23.59:73,0,24	0/1:11,0:11:22.01:22,0,77	0/0:4,0:4:8.48:0,8,40	0/1:11,0:11:7.05:81,0,7	0/1:13,0:13:28.23:28,0,148	0/1:18,0:16:22.41:22,0,126	0/1:25,0:24:99:205,0,107	0/1:8,0:8:14.01:54,0,14	0/0:21,0:21:56.99:0,57,616	0/0:18,0:18:50.32:0,50,442	0/0:14,0:14:29.89:0,30,368	0/1:17,0:17:99:103,0,104	0/1:19,0:17:78.52:79,0,115	0/0:18,0:17:7.78:0,8,142	1/1:7,0:7:14.95:117,15,0
chr10	63687694	.	TAATA	T	351.57	PASS	AB=0.750;AC=12;AF=0.261;AN=46;BaseQRankSum=0.943;DP=260;FS=1.137;HRun=0;HaplotypeScore=68.7507;InbreedingCoeff=0.4268;MQ=57.54;MQ0=1;MQRankSum=-3.554;QD=3.29;ReadPosRankSum=-0.131;VQSLOD=1.4973;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:24:3:28,3,0	0/1:0,0:2:14.53:22,0,15	./.	./.	./.	0/0:8,0:8:12.04:0,12,283	0/0:7,0:7:3.01:0,3,71	1/1:18,0:22:2.19:5,2,0	0/0:3,0:3:3.01:0,3,71	0/0:10,0:10:9.03:0,9,212	0/0:12,0:12:9.03:0,9,212	0/0:5,0:5:3.01:0,3,71	0/0:6,0:6:6.02:0,6,120	0/0:2,0:2:3.01:0,3,71	0/0:8,0:8:6.02:0,6,142	0/0:5,0:5:3.01:0,3,43	0/1:21,0:21:0.67:1,0,853	0/0:14,0:13:21.07:0,21,467	1/1:11,6:18:21.06:306,21,0	1/1:7,2:9:6.02:74,6,0	0/0:11,0:11:21.07:0,21,495	./.	./.	0/0:5,0:5:9.03:0,9,212	0/0:11,0:11:18.06:0,18,372	0/0:8,0:8:12.04:0,12,249	1/1:9,1:10:3.01:47,3,0	0/0:12,0:12:21.07:0,21,438
chr10	63688933	.	TGTGA	T	43.81	PASS	AB=0.933;AC=6;AF=0.115;AN=52;BaseQRankSum=6.492;DP=798;FS=1.017;HRun=0;HaplotypeScore=98.3427;InbreedingCoeff=0.0340;MQ=55.17;MQ0=91;MQRankSum=-1.369;QD=0.37;ReadPosRankSum=-4.548;VQSLOD=0.8735;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:11:6.02:0,6,148	0/0:7,0:3:2.74:0,3,23	0/1:39,0:16:60.26:60,0,482	0/0:63,0:27:42.23:0,42,618	0/0:13,0:6:5.24:0,5,35	0/0:6,1:5:6.02:0,6,151	0/0:43,0:32:42.10:0,42,915	0/0:22,0:10:27.09:0,27,633	0/0:34,2:23:20.14:0,20,960	0/0:28,0:14:35.88:0,36,740	./.	0/0:35,0:19:17.80:0,18,396	0/0:35,1:26:11.23:0,11,1126	0/0:43,0:22:5:0,5,371	0/0:14,2:8:9.01:0,9,200	0/1:22,4:16:53.97:54,0,346	0/1:16,1:15:13.03:13,0,583	0/1:32,3:27:8.57:9,0,1133	0/0:14,0:11:30.03:0,30,568	0/0:5,0:2:6.02:0,6,168	0/0:109,3:80:91.06:0,91,2094	0/0:22,0:12:14.93:0,15,342	0/0:6,0:4:3.01:0,3,84	0/0:111,6:88:85.62:0,86,3163	./.	0/0:17,0:7:13.25:0,13,369	0/0:5,0:4:11.97:0,12,263	1/1:2,0:1:2.97:20,3,0
chr10	63688971	.	GC	G	5222.21	PASS	AB=0.825;AC=21;AF=0.389;AN=54;BaseQRankSum=7.593;DP=1293;FS=24.549;HRun=1;HaplotypeScore=135.7076;InbreedingCoeff=-0.5504;MQ=39.49;MQ0=300;MQRankSum=5.906;QD=5.62;ReadPosRankSum=-2.358;VQSLOD=-0.0854;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:18,7:16:80.87:111,0,81	0/1:11,1:5:35.29:35,0,42	0/0:58,0:1:3.01:0,3,48	0/0:83,1:8:2.52:0,3,48	0/1:20,3:13:32.97:33,0,87	0/0:10,4:10:9.01:0,9,144	0/1:62,15:65:99:403,0,1124	0/0:39,0:3:9.01:0,9,120	0/1:50,14:48:99:412,0,773	0/1:42,14:38:99:451,0,724	0/0:9,0:5:3.90:0,4,48	0/1:63,6:40:99:152,0,573	0/1:34,1:20:2.01:2,0,526	0/1:55,15:48:99:267,0,609	0/1:32,5:24:99:138,0,254	0/1:40,10:31:99:156,0,557	0/1:32,7:36:99:177,0,833	0/1:49,14:49:99:482,0,1119	0/1:20,3:14:47.80:48,0,441	0/1:6,3:5:32.93:33,0,87	0/1:165,57:158:99:1694,0,2032	0/0:16,0:9:8.72:0,9,144	./.	0/0:136,0:97:99:0,128,1943	1/1:4,5:7:6.02:84,6,0	0/1:25,6:17:99:207,0,347	0/1:5,6:10:99:225,0,117	0/1:2,3:4:35.92:114,0,36
chr10	63689047	.	G	GC	56.27	PASS	AB=0.911;AC=9;AF=0.180;AN=50;BaseQRankSum=-2.322;DP=1298;DS;FS=0.000;HRun=0;HaplotypeScore=130.4036;InbreedingCoeff=-0.0099;MQ=31.89;MQ0=311;MQRankSum=0.524;QD=0.11;ReadPosRankSum=-0.094;VQSLOD=2.4493;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,1:11:6.49:0,6,84	1/1:14,0:7:0.26:0,0,0	0/0:93,0:6:7.20:0,7,137	0/0:122,1:5:12.03:0,12,154	0/1:23,1:12:0:0,0,0	0/0:20,0:14:8.23:0,8,125	0/0:69,3:53:31.87:0,32,417	./.	0/0:56,1:39:68.18:0,68,901	0/0:45,0:26:65.26:0,65,810	./.	0/0:58,2:36:54.48:0,54,712	0/1:31,6:22:25.48:25,0,223	0/0:80,3:58:20.53:0,21,874	0/1:29,2:18:27.34:27,0,213	0/1:46,8:35:5.52:6,0,503	0/1:36,3:33:68.62:69,0,828	0/0:51,4:38:36.34:0,36,1025	0/0:6,0:4:9.03:0,9,126	0/0:14,0:11:6.02:0,6,84	0/1:155,5:103:8.67:9,0,1775	./.	0/0:7,0:6:1.25:0,1,3	0/1:117,26:97:31.70:32,0,1251	0/0:25,0:21:3.01:0,3,42	0/0:34,0:19:54.17:0,54,740	0/0:20,0:18:30.10:0,30,415	0/0:16,0:8:10.91:0,11,203
chr10	63690710	.	CTCTG	C	1049.74	PASS	AB=0.980;AC=16;AF=0.308;AN=52;BaseQRankSum=8.502;DP=491;FS=2.532;HRun=0;HaplotypeScore=102.8568;InbreedingCoeff=-0.0098;MQ=43.50;MQ0=16;MQRankSum=-4.862;QD=3.99;ReadPosRankSum=0.217;VQSLOD=1.8689;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:19:5.86:0,6,50	0/0:6,0:5:6.01:0,6,62	./.	./.	0/0:23,0:21:8.78:0,9,51	0/1:25,0:24:19.49:19,0,38	0/1:22,0:19:18.47:25,0,18	0/1:26,9:30:99:418,0,357	1/1:25,0:25:4.52:16,5,0	0/1:24,0:24:99:194,0,119	0/0:15,0:12:3:0,3,25	0/0:11,0:11:2.78:0,3,24	0/0:28,0:28:84.11:0,84,1732	0/1:13,0:13:2.66:3,0,19	1/1:22,0:22:13.12:45,13,0	1/1:21,0:20:16.20:116,16,0	0/1:17,0:17:6.06:41,0,6	0/0:16,0:13:3.48:0,3,45	0/1:17,0:12:16.97:17,0,146	0/1:12,0:12:11.99:19,0,12	0/0:18,0:17:14.97:0,15,120	0/0:23,0:22:57.14:0,57,1179	0/0:17,0:16:39.08:0,39,725	0/0:30,0:28:78.19:0,78,1554	0/0:10,0:10:5.95:0,6,44	0/1:18,0:17:80.68:220,0,81	0/1:12,0:12:51.28:70,0,51	0/0:5,0:5:2.15:0,2,52
chr10	63690714	.	GTCTC	G	2206.90	PASS	AB=0.993;AC=26;AF=0.542;AN=48;BaseQRankSum=7.280;DP=483;FS=0.555;HRun=0;HaplotypeScore=97.0190;InbreedingCoeff=0.3190;MQ=42.81;MQ0=17;MQRankSum=-4.500;QD=7.48;ReadPosRankSum=-0.258;VQSLOD=2.2609;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:15,6:15:0.89:0,1,2	0/0:4,1:4:2.96:0,3,19	./.	./.	1/1:22,0:20:2.84:16,3,0	1/1:22,3:24:5.66:80,6,0	1/1:22,0:19:3:51,3,0	0/1:35,0:30:99:313,0,115	1/1:22,2:23:11.71:107,12,0	0/1:21,1:22:26.12:403,0,26	0/0:14,0:11:0:0,0,0	0/1:11,0:11:0:0,0,0	0/0:29,0:29:74.69:0,75,1484	1/1:13,0:13:3.01:33,3,0	1/1:22,0:22:17.50:170,18,0	1/1:21,0:20:18.05:249,18,0	1/1:17,0:17:15.76:151,16,0	0/0:15,0:12:5.80:0,6,41	0/1:15,0:10:56.28:94,0,56	1/1:10,1:11:3.01:50,3,0	./.	0/0:21,0:20:48.16:0,48,968	0/0:19,0:19:41.90:0,42,615	0/0:33,0:30:72.19:0,72,1366	./.	1/1:17,1:17:28.34:487,28,0	0/1:12,0:12:25.53:128,0,26	0/1:5,0:5:7.28:29,0,7
chr10	63690718	.	C	CTG	4218.56	PASS	AB=0.583;AC=37;AF=0.740;AN=50;BaseQRankSum=6.968;DP=502;FS=4.775;HRun=0;HaplotypeScore=90.6708;InbreedingCoeff=0.5779;MQ=41.97;MQ0=17;MQRankSum=-5.934;QD=12.09;ReadPosRankSum=0.157;VQSLOD=4.1903;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:21,1:15:5.87:71,6,0	1/1:5,0:4:5.95:44,6,0	./.	./.	1/1:11,0:19:6.47:71,6,0	1/1:7,18:23:6.02:109,6,0	1/1:5,18:20:3.32:56,3,0	1/1:37,0:33:2.22:528,2,0	1/1:5,21:25:12.01:219,12,0	1/1:4,18:22:36.58:681,37,0	0/1:4,10:11:0:0,0,0	0/0:2,10:12:0:0,0,0	0/0:31,0:31:83.67:0,84,1113	1/1:2,11:14:3.01:50,3,0	1/1:2,23:22:18.06:308,18,0	1/1:2,19:20:18.06:321,18,0	1/1:2,16:18:15.84:206,16,0	0/0:7,9:13:4.41:0,4,14	1/1:11,6:12:0.13:329,0,0	1/1:3,11:12:3.01:54,3,0	./.	0/0:22,0:21:54.15:0,54,782	0/0:21,0:19:45.05:0,45,594	0/0:33,0:30:78.09:0,78,1084	1/1:3,6:9:2.96:19,3,0	1/1:1,16:18:44.85:728,45,0	1/1:4,9:12:2.05:246,2,0	1/1:1,4:5:12.02:177,12,0
chr10	63690724	.	C	CGG	1336.10	PASS	AB=0.984;AC=25;AF=0.481;AN=52;BaseQRankSum=8.142;DP=488;FS=1.841;HRun=0;HaplotypeScore=103.2663;InbreedingCoeff=0.2650;MQ=40.25;MQ0=17;MQRankSum=-3.701;QD=4.30;ReadPosRankSum=4.597;VQSLOD=2.5269;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:15:5.98:0,6,48	0/0:5,0:3:3.01:0,3,37	./.	./.	1/1:13,6:17:3.48:62,3,0	1/1:24,0:22:6:59,6,0	1/1:23,0:20:2.40:8,2,0	0/1:39,0:35:9.08:9,0,556	1/1:25,0:24:11.99:126,12,0	0/1:19,0:20:15.40:196,0,15	0/1:14,0:11:0:0,0,0	0/0:10,0:10:2.94:0,3,18	0/0:28,0:28:78.07:0,78,1228	1/1:13,0:13:4.79:36,5,0	1/1:26,0:23:8.99:142,9,0	1/1:20,0:19:15.42:155,15,0	0/1:18,0:18:12.09:79,0,12	0/0:14,0:11:8.23:0,8,64	0/1:18,0:13:99:163,0,129	1/1:13,0:11:3:29,3,0	0/0:10,0:8:0:0,0,0	0/0:23,0:22:57.19:0,57,918	0/0:23,0:21:48.13:0,48,743	0/0:32,0:29:81.12:0,81,1255	0/0:10,0:10:2.97:0,3,20	0/1:21,0:20:99:186,0,115	0/1:13,0:13:49.66:144,0,50	1/1:4,0:4:9.03:104,9,0
chr10	63690726	.	CTCTG	C	1369.44	PASS	AB=0.983;AC=28;AF=0.583;AN=48;BaseQRankSum=6.801;DP=481;FS=7.449;HRun=0;HaplotypeScore=112.4044;InbreedingCoeff=0.1300;MQ=39.61;MQ0=16;MQRankSum=-3.195;QD=4.06;ReadPosRankSum=-0.193;VQSLOD=1.4081;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:14:2.98:23,3,0	0/1:5,0:3:0:0,0,0	./.	./.	0/0:19,0:17:1.36:0,1,3	1/1:22,0:20:4.46:30,4,0	1/1:23,0:20:1.82:32,2,0	0/1:32,5:34:99:457,0,210	1/1:27,0:26:4.54:16,5,0	0/1:19,1:20:36.20:336,0,36	0/1:16,0:13:0:0,0,0	1/1:11,0:11:2.59:16,3,0	0/0:27,0:27:62.03:0,62,1495	1/1:12,0:12:1.95:8,2,0	1/1:26,0:23:13.73:59,14,0	1/1:19,0:18:16.01:114,16,0	0/1:18,0:17:4.03:46,0,4	0/1:12,0:9:6.12:12,0,6	0/1:17,0:12:59.39:59,0,81	1/1:13,0:11:3:25,3,0	./.	0/0:24,0:23:50.86:0,51,1031	0/0:23,0:21:42.08:0,42,679	0/0:31,0:28:69.20:0,69,1395	./.	0/1:21,0:20:35.76:224,0,36	0/1:13,0:12:22.12:53,0,22	0/1:4,0:4:0.55:1,0,30
chr10	63690746	.	CTG	C	307.38	PASS	AB=0.988;AC=13;AF=0.283;AN=46;BaseQRankSum=4.339;DP=486;FS=22.850;HRun=0;HaplotypeScore=121.8583;InbreedingCoeff=-0.1324;MQ=36.91;MQ0=18;MQRankSum=-4.388;QD=1.67;ReadPosRankSum=-1.194;VQSLOD=0.7466;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:21,0:13:2.65:27,0,3	0/1:6,0:4:15.81:16,0,38	./.	./.	0/0:14,5:17:3.45:0,3,22	0/0:18,0:15:2.87:0,3,24	0/0:22,0:17:1.24:0,1,3	0/0:39,0:35:1:0,1,195	0/0:24,0:23:11.93:0,12,90	0/1:20,0:19:62.74:63,0,64	0/1:19,0:17:0:0,0,0	1/1:14,0:14:10.82:55,11,0	0/0:25,0:25:47.16:0,47,802	0/1:14,0:14:12.92:13,0,18	0/0:26,0:23:17.74:0,18,128	0/0:17,0:16:8.61:0,9,65	0/1:13,0:12:23.24:23,0,49	0/1:9,1:6:11.10:11,0,12	0/1:19,0:18:71.57:72,0,116	./.	./.	0/0:27,0:26:25.24:0,25,602	0/0:24,0:22:1.75:0,2,428	0/0:32,0:29:73.08:0,73,1022	./.	0/1:21,1:20:72.37:128,0,72	0/1:18,0:16:24.78:25,0,78	0/1:8,0:8:4.95:5,0,53
chr10	63691691	.	A	AC	2033.80	PASS	AB=0.667;AC=42;AF=0.875;AN=48;BaseQRankSum=-1.638;DP=120;FS=0.000;HRun=1;HaplotypeScore=59.9787;InbreedingCoeff=0.1497;MQ=32.75;MQ0=29;MQRankSum=-1.543;QD=22.35;ReadPosRankSum=3.038;VQSLOD=3.7050;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,2:3:6.02:86,6,0	1/1:1,1:1:3.01:44,3,0	0/0:4,0:1:2.97:0,3,20	0/0:9,0:1:2.50:0,2,9	1/1:2,3:4:9.03:133,9,0	1/1:3,1:2:3.48:44,3,0	1/1:4,1:2:5.98:63,6,0	1/1:3,5:2:2.98:21,3,0	1/1:2,1:3:3.95:44,4,0	1/1:1,1:2:4.26:48,4,0	./.	1/1:2,4:4:6.96:87,7,0	1/1:0,1:1:3.01:43,3,0	1/1:0,3:3:9.03:129,9,0	0/1:3,3:5:6.10:77,0,6	0/1:1,1:2:3.02:37,0,3	1/1:1,6:7:18.03:237,18,0	1/1:0,2:1:3.01:43,3,0	1/1:1,4:4:12.04:172,12,0	1/1:0,3:2:6.02:87,6,0	./.	./.	./.	1/1:0,2:2:6.02:86,6,0	1/1:0,3:3:9.03:130,9,0	1/1:0,4:4:12.04:173,12,0	1/1:1,3:4:9.50:133,10,0	1/1:0,8:6:15.05:219,15,0
chr10	63691777	.	CTTCTGGTG	C	52.37	PASS	AB=0.722;AC=2;AF=0.036;AN=56;BaseQRankSum=-0.048;DP=338;FS=8.488;HRun=0;HaplotypeScore=92.8424;InbreedingCoeff=-0.0493;MQ=32.28;MQ0=23;MQRankSum=-2.063;QD=2.91;ReadPosRankSum=-2.843;VQSLOD=0.4280;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:10,4:13:59.28:59,0,1187	0/1:2,2:2:81.71:82,0,129	0/0:7,0:3:9.03:0,9,394	0/0:9,0:3:9.03:0,9,367	0/0:16,0:13:30.10:0,30,1352	0/0:16,0:16:36.12:0,36,1625	0/0:15,0:8:24.08:0,24,1083	0/0:21,0:14:39.13:0,39,1710	0/0:10,0:10:27.09:0,27,1144	0/0:18,0:17:48.16:0,48,2172	0/0:4,0:2:6.02:0,6,271	0/0:11,0:8:21.07:0,21,948	0/0:9,0:8:21.07:0,21,948	0/0:13,0:13:30.10:0,30,1350	0/0:14,0:11:30.10:0,30,1354	0/0:5,0:4:12.04:0,12,541	0/0:32,0:30:78.27:0,78,3478	0/0:13,0:10:24.08:0,24,1042	0/0:12,0:7:21.07:0,21,927	0/0:11,0:9:27.09:0,27,1214	0/0:13,0:9:21.46:0,21,718	0/0:7,0:7:15.05:0,15,649	0/0:7,0:5:15.05:0,15,678	0/0:10,0:9:14.72:0,15,676	0/0:14,0:13:30.10:0,30,1355	0/0:12,0:11:33.11:0,33,1383	0/0:10,0:9:23.95:0,24,1075	0/0:11,0:10:21.07:0,21,946
chr10	63691821	.	GAATAAATAAATAAATAAATA	G	505.41	PASS	AB=0.809;AC=5;AF=0.250;AN=20;BaseQRankSum=2.285;DP=292;FS=6.008;HRun=0;HaplotypeScore=140.1905;InbreedingCoeff=0.3281;MQ=34.92;MQ0=6;MQRankSum=-1.632;QD=7.43;ReadPosRankSum=0.979;VQSLOD=2.0436;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:6.02:0,6,271	0/0:1,0:2:6.02:0,6,222	./.	0/0:12,0:4:3.01:0,3,43	0/0:9,0:11:6.02:0,6,341	1/1:12,2:14:3.01:159,3,0	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	0/1:29,9:36:2.35:153,0,2	./.	./.	./.	0/0:3,0:3:1.25:0,1,3	0/0:6,0:6:3.01:0,3,193	./.	0/0:7,0:6:3.01:0,3,82	./.	./.	./.	1/1:8,8:15:6.02:281,6,0
chr10	63691841	.	A	AG	47.82	PASS	AB=1.000;AC=7;AF=0.152;AN=46;BaseQRankSum=1.437;DP=146;FS=1.810;HRun=0;HaplotypeScore=27.0159;InbreedingCoeff=0.1296;MQ=35.22;MQ0=9;MQRankSum=-0.619;QD=1.17;ReadPosRankSum=-1.857;VQSLOD=0.4871;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:8:18.03:0,18,230	0/0:2,0:2:6.02:0,6,84	./.	0/0:6,0:1:3.01:0,3,42	0/0:4,0:4:8.94:0,9,101	0/0:7,0:7:11.44:0,11,76	0/1:2,0:2:15.01:15,0,16	0/0:26,0:6:12.03:0,12,152	./.	1/1:0,1:1:3.01:48,3,0	0/0:1,0:1:3.01:0,3,42	./.	0/0:5,0:5:14.97:0,15,166	0/0:3,0:3:5.98:0,6,62	0/0:4,0:3:9:0,9,104	./.	0/1:21,0:19:12.27:12,0,201	0/0:9,2:10:4.04:0,4,235	1/1:4,1:1:3.01:48,3,0	0/0:2,0:2:5.98:0,6,59	0/0:2,1:3:1.25:0,1,3	0/0:2,0:2:5.99:0,6,63	./.	0/0:2,0:2:3.01:0,3,42	0/0:4,0:4:9.03:0,9,125	0/0:4,0:4:8.99:0,9,104	0/0:4,1:4:6.02:0,6,84	0/1:12,0:11:36.23:36,0,81
chr10	63691880	.	C	CT	287.41	PASS	AB=1.000;AC=12;AF=0.214;AN=56;BaseQRankSum=-0.011;DP=242;FS=0.000;HRun=2;HaplotypeScore=49.9490;InbreedingCoeff=0.3927;MQ=57.28;MQ0=3;MQRankSum=0.443;QD=6.84;ReadPosRankSum=-0.812;VQSLOD=0.3081;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,8:9:10.23:246,10,0	1/1:0,3:3:9.03:128,9,0	0/0:5,0:5:14.92:0,15,151	0/1:6,0:3:0.94:1,0,50	0/0:10,0:10:27.08:0,27,333	0/0:10,0:10:6.59:0,7,34	0/0:7,0:7:9.33:0,9,36	0/0:35,0:26:72.17:0,72,861	0/0:6,0:6:2.43:0,2,11	0/0:6,0:6:0.27:0,0,4	0/0:9,0:9:1.49:0,1,3	0/0:8,0:8:4.87:0,5,16	0/0:2,0:2:6.02:0,6,74	0/0:3,0:3:2.37:0,2,8	1/1:5,0:5:0.95:1,1,0	1/1:3,0:3:1.41:2,1,0	0/0:28,0:28:26.27:0,26,101	0/0:16,0:15:6.21:0,6,22	1/1:10,0:7:1.95:21,2,0	0/0:8,0:8:3.74:0,4,15	0/1:6,0:6:8.68:9,0,11	0/0:3,0:3:9.03:0,9,111	0/0:1,0:1:3.01:0,3,37	0/0:7,0:7:12.04:0,12,148	0/0:6,0:6:9.41:0,9,34	0/0:4,0:4:4.53:0,5,16	0/0:7,0:7:3.22:0,3,12	0/0:19,0:18:11.01:0,11,39
chr10	63692137	.	A	AT	965.58	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-8.752;DP=590;FS=26.803;HRun=4;HaplotypeScore=61.5082;InbreedingCoeff=0.9769;MQ=57.22;MQ0=5;MQRankSum=-0.461;QD=32.19;ReadPosRankSum=-3.320;VQSLOD=1.0023;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,111,1259	0/0:8,0:8:24.07:0,24,271	0/0:18,0:14:42.07:0,42,447	0/0:21,0:20:54.13:0,54,583	0/0:12,0:12:30.04:0,30,326	0/0:28,0:27:72.20:0,72,816	0/0:31,0:31:78.01:0,78,884	1/1:1,29:28:81.23:1060,81,0	0/0:22,0:22:51.13:0,51,568	0/0:17,0:17:45.13:0,45,510	0/0:17,0:17:45.13:0,45,510	0/0:16,0:16:41.97:0,42,476	0/0:10,0:10:27.08:0,27,306	0/0:17,0:17:42.12:0,42,476	0/0:19,0:19:39.11:0,39,442	0/0:25,0:25:63.15:0,63,695	0/0:29,0:29:81.22:0,81,908	0/0:34,0:34:99:0,99,1111	0/0:28,0:25:69.18:0,69,772	0/0:8,0:8:21.06:0,21,238	0/0:26,0:26:78.22:0,78,882	0/0:14,0:14:39.11:0,39,442	0/0:20,0:20:57.15:0,57,636	0/0:20,0:20:60.17:0,60,681	0/0:6,0:6:15.04:0,15,169	0/0:15,0:15:42.12:0,42,477	0/0:20,0:19:48.09:0,48,528	0/0:27,0:27:81.21:0,81,905
chr10	63692440	.	C	CA	6622.70	PASS	AB=0.703;AC=38;AF=0.679;AN=56;BaseQRankSum=-5.087;DP=608;FS=5.779;HRun=12;HaplotypeScore=76.3069;InbreedingCoeff=0.5320;MQ=70.62;MQ0=0;MQRankSum=-0.442;QD=13.57;ReadPosRankSum=-1.016;VQSLOD=4.7870;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,26:32:19.75:512,20,0	1/1:2,12:15:32.89:306,33,0	0/0:18,0:15:19.87:0,20,129	0/1:16,0:15:22.78:29,0,23	0/0:24,0:26:49.70:0,50,354	1/1:2,11:14:29.88:277,30,0	0/1:2,9:11:3.88:128,0,4	0/0:23,1:26:18.90:0,19,260	1/1:5,21:26:30.05:292,30,0	1/1:11,17:30:19.82:459,20,0	1/1:5,18:25:25.01:390,25,0	0/1:1,11:12:3.72:124,0,4	0/0:13,0:13:26.76:0,27,196	1/1:14,3:17:29.11:245,29,0	1/1:5,18:24:31.13:280,31,0	1/1:1,16:16:27.04:263,27,0	0/1:14,13:32:39.22:230,0,39	1/1:6,22:29:43.50:484,43,0	0/1:5,7:14:9.45:199,0,9	1/1:5,21:27:56.66:513,57,0	1/1:10,12:22:5.13:212,5,0	0/0:17,0:19:41.94:0,42,294	0/1:22,3:25:16.88:17,0,371	0/0:17,1:18:12.54:0,13,255	1/1:1,17:19:50.91:477,51,0	1/1:14,11:25:46.29:430,46,0	1/1:4,29:35:21.95:506,22,0	1/1:6,12:20:25.72:253,26,0
chr10	63693347	.	A	AT	582.97	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-3.069;DP=652;FS=0.857;HRun=6;HaplotypeScore=66.0877;InbreedingCoeff=0.9798;MQ=72.29;MQ0=0;MQRankSum=1.477;QD=30.68;ReadPosRankSum=1.159;VQSLOD=4.2750;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,147,1484	0/0:8,0:8:21.05:0,21,214	0/0:19,0:18:37.42:0,37,380	0/0:18,0:18:32.74:0,33,381	1/1:2,17:19:54.17:678,54,0	0/0:25,0:25:72.14:0,72,727	0/0:20,0:20:54.12:0,54,550	0/0:28,0:28:72.16:0,72,734	0/0:24,0:24:60.10:0,60,599	0/0:20,0:20:57.13:0,57,582	0/0:20,0:20:57.10:0,57,567	0/0:31,0:31:93.20:0,93,942	0/0:13,0:13:36.08:0,36,367	0/0:20,0:20:54.12:0,54,550	0/0:26,0:26:78.18:0,78,796	0/0:16,0:16:33.07:0,33,337	0/0:34,0:34:99:0,102,1019	0/0:6,0:5:15.03:0,15,153	0/0:19,0:19:51.07:0,51,509	0/0:28,0:28:84.19:0,84,856	0/0:28,0:28:69.10:0,69,687	0/0:31,0:31:81.17:0,81,826	0/0:28,0:28:74.85:0,75,765	0/0:35,0:35:99:0,99,996	0/0:19,0:19:57.10:0,57,565	0/0:35,0:35:96.17:0,96,965	0/0:19,0:19:51.10:0,51,513	0/0:14,0:14:42.06:0,42,414
chr10	63693736	.	CCT	C	2663.88	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=11.571;DP=800;FS=1.662;HRun=0;HaplotypeScore=95.1739;InbreedingCoeff=0.9989;MQ=84.93;MQ0=0;MQRankSum=-3.429;QD=42.97;ReadPosRankSum=2.334;VQSLOD=5.2582;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,53:53:99:2394,148,0	1/1:0,9:9:24.08:391,24,0	0/0:19,0:19:54.17:0,54,984	0/0:30,0:30:87.27:0,87,1657	0/0:23,0:23:69.24:0,69,1399	0/0:18,0:18:51.18:0,51,1036	0/0:44,0:44:99:0,132,2623	0/0:28,0:28:84.29:0,84,1672	0/0:32,0:32:96.33:0,96,1936	0/0:26,0:26:75.25:0,75,1455	0/0:13,0:13:39.13:0,39,792	0/0:30,0:30:90.28:0,90,1773	0/0:28,0:28:84.27:0,84,1669	0/0:32,0:32:96.31:0,96,1896	0/0:38,0:38:99:0,114,2280	0/0:30,0:30:90.31:0,90,1829	0/0:27,0:27:81.26:0,81,1593	0/0:23,0:23:69.20:0,69,1314	0/0:25,0:25:75.22:0,75,1470	0/0:34,0:34:99:0,102,2070	0/0:54,0:54:99:0,163,3202	0/0:33,0:33:99:0,99,1965	0/0:20,0:20:60.19:0,60,1140	0/0:33,0:33:99:0,99,1974	0/0:23,0:23:69.24:0,69,1386	0/0:31,0:31:93.32:0,93,1876	0/0:29,0:29:87.30:0,87,1753	0/0:15,0:15:45.15:0,45,872
chr10	63694606	.	TGTGTGTGTGAGAGAGA	T	302.42	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=3.102;DP=427;FS=0.000;HRun=0;HaplotypeScore=149.3055;InbreedingCoeff=0.6655;MQ=49.95;MQ0=19;MQRankSum=-3.571;QD=8.89;ReadPosRankSum=0.830;VQSLOD=2.1315;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,16:23:3.48:114,3,0	1/1:1,9:9:6.02:286,6,0	0/0:12,0:4:12.04:0,12,406	0/0:11,0:5:11.77:0,12,284	0/0:10,0:10:7.27:0,7,190	0/0:18,0:16:12.04:0,12,650	0/0:20,0:20:31.82:0,32,1272	0/0:19,0:19:40.03:0,40,393	0/0:16,0:16:35.61:0,36,1735	0/0:12,0:12:30.09:0,30,1044	0/0:13,0:13:18.93:0,19,732	0/0:8,0:8:9.97:0,10,458	0/0:11,0:10:24.08:0,24,860	0/0:11,0:10:6.48:0,6,198	0/0:9,0:9:15.04:0,15,707	0/0:13,0:13:24.24:0,24,1022	0/0:34,0:32:63.36:0,63,2910	0/0:24,0:21:57.09:0,57,2181	0/0:15,0:11:27.09:0,27,1202	0/0:9,0:8:18.06:0,18,675	0/0:30,0:30:37.01:0,37,1446	0/0:13,0:13:30.10:0,30,1637	0/0:9,0:9:21.54:0,22,1033	0/0:40,0:39:99:0,101,3733	0/0:9,0:9:9.03:0,9,412	0/0:13,0:12:36.12:0,36,1508	0/0:6,0:6:18.06:0,18,754	0/0:8,0:8:24.08:0,24,1260
chr10	63694614	.	TGAGA	T	448.12	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=-1.028;DP=441;FS=7.872;HRun=0;HaplotypeScore=89.9727;InbreedingCoeff=0.4507;MQ=57.92;MQ0=13;MQRankSum=-2.013;QD=4.00;ReadPosRankSum=-0.163;VQSLOD=0.8439;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:23:3:28,3,0	1/1:9,0:9:5.86:56,6,0	0/0:21,0:10:23.15:0,23,336	0/0:23,0:11:26.26:0,26,358	0/1:11,0:11:34.76:35,0,138	0/0:19,0:17:9.03:0,9,185	0/0:18,0:18:25:0,25,427	1/1:9,9:18:27.01:430,27,0	0/0:15,0:15:30.49:0,30,514	0/0:11,0:11:12.04:0,12,232	0/0:9,0:11:18.53:0,19,342	0/0:6,0:6:9.03:0,9,156	0/0:13,0:12:21.07:0,21,370	0/0:5,0:12:2.98:0,3,49	0/0:9,0:9:12.04:0,12,210	0/0:13,0:14:21.07:0,21,379	0/0:33,0:31:57.15:0,57,915	0/0:21,0:19:33.58:0,34,640	0/0:12,0:12:24.01:0,24,427	0/0:11,0:10:24.51:0,25,364	0/0:28,0:28:30.06:0,30,465	0/0:13,0:13:24.08:0,24,479	0/1:13,0:13:7.67:8,0,592	0/1:37,0:36:32.41:32,0,887	0/0:7,0:8:15.05:0,15,249	0/0:12,0:12:24:0,24,418	0/0:6,0:6:15.05:0,15,270	0/0:12,0:12:36.12:0,36,645
chr10	63694707	.	TTTTATTTATTTA	T	1900.62	PASS	AC=24;AF=0.706;AN=34;BaseQRankSum=2.025;DP=240;FS=3.396;HRun=0;HaplotypeScore=76.5643;InbreedingCoeff=0.4924;MQ=66.26;MQ0=3;MQRankSum=-2.466;QD=16.53;ReadPosRankSum=2.687;VQSLOD=0.9491;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	0/0:10,0:12:6.02:0,6,101	1/1:6,4:10:3.01:102,3,0	1/1:2,1:3:2.97:20,3,0	0/0:30,0:27:18.05:0,18,422	1/1:0,0:1:1.55:4,2,0	1/1:9,3:12:8.99:171,9,0	./.	./.	0/0:3,0:4:3.01:0,3,77	./.	./.	1/1:4,2:6:6.02:205,6,0	1/1:18,12:30:8.99:300,9,0	1/1:11,4:15:9.03:307,9,0	./.	1/1:5,1:6:3.01:94,3,0	./.	0/0:1,0:1:3:0,3,25	./.	0/0:6,0:7:3.01:0,3,77	1/1:5,1:6:3.01:102,3,0	1/1:4,2:6:6.02:205,6,0	1/1:5,3:8:6.02:205,6,0	1/1:9,3:12:9.03:307,9,0
chr10	63695293	.	T	TGG	279.16	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.316;DP=595;FS=9.521;HRun=0;HaplotypeScore=82.8451;InbreedingCoeff=0.9529;MQ=50.61;MQ0=25;MQRankSum=-2.434;QD=4.90;ReadPosRankSum=7.372;VQSLOD=0.7546;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:40,3:42:40.79:294,41,0	1/1:11,2:11:16.49:104,16,0	0/0:18,0:6:11.07:0,11,125	0/0:12,0:4:11.85:0,12,110	0/0:26,0:26:69.22:0,69,927	0/0:12,0:11:30.07:0,30,398	0/0:20,0:18:51.14:0,51,664	0/0:37,0:34:85.68:0,86,1026	0/0:19,0:16:42.12:0,42,540	0/0:22,0:22:22.75:0,23,784	0/0:14,0:12:33.09:0,33,438	0/0:20,0:20:54.16:0,54,727	0/0:7,0:7:18.06:0,18,261	0/0:15,0:14:35.70:0,36,437	0/0:20,0:20:54.17:0,54,731	0/0:18,0:18:51.16:0,51,687	0/0:51,0:49:99:0,108,1464	0/0:26,0:21:54.14:0,54,707	0/0:21,0:16:48.16:0,48,669	0/0:21,0:20:60.19:0,60,813	0/0:15,0:15:31.40:0,31,383	0/0:19,0:19:54.16:0,54,705	0/0:13,0:13:39.12:0,39,528	0/0:22,0:21:30.54:0,31,406	0/0:14,0:14:39.13:0,39,530	0/0:32,0:30:87.28:0,87,1184	0/0:29,0:29:87.23:0,87,1142	0/0:15,0:14:39.11:0,39,510
chr10	63695294	.	T	TGGTTC	2146.13	PASS	AB=0.957;AC=5;AF=0.089;AN=56;BaseQRankSum=-3.706;DP=595;FS=8.196;HRun=0;HaplotypeScore=119.1480;InbreedingCoeff=0.8066;MQ=49.62;MQ0=25;MQRankSum=-3.177;QD=27.87;ReadPosRankSum=6.701;VQSLOD=2.5768;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,29:41:57.45:1833,57,0	1/1:0,10:10:17.87:431,18,0	0/0:18,0:6:11.09:0,11,154	0/0:9,0:3:8.89:0,9,104	0/0:26,0:26:69.23:0,69,1280	0/0:13,0:12:30.10:0,30,576	0/0:19,0:17:51.08:0,51,911	0/0:37,0:34:89.31:0,89,1461	0/0:19,0:16:42.14:0,42,810	0/1:21,0:22:2.31:2,0,1019	0/0:14,0:12:30.10:0,30,567	0/0:20,0:20:54.05:0,54,976	0/0:7,0:7:18.06:0,18,367	0/0:15,0:14:35.33:0,35,635	0/0:20,0:20:54.16:0,54,1019	0/0:18,0:18:51.16:0,51,956	0/0:52,0:50:99:0,108,1974	0/0:27,0:22:49.19:0,49,930	0/0:22,0:17:48.16:0,48,935	0/0:21,0:20:43.04:0,43,1066	0/0:15,0:15:30.20:0,30,539	0/0:19,0:19:54.15:0,54,965	0/0:13,0:13:39.08:0,39,734	0/0:22,0:21:33.53:0,34,627	0/0:14,0:14:39.13:0,39,730	0/0:34,0:32:86.74:0,87,1614	0/0:29,0:29:86.83:0,87,1452	0/0:15,0:14:38.72:0,39,693
chr10	63698880	.	A	AAG	116.82	PASS	AB=0.600;AC=3;AF=0.054;AN=56;BaseQRankSum=0.481;DP=499;FS=0.000;HRun=0;HaplotypeScore=69.4850;InbreedingCoeff=0.4082;MQ=41.24;MQ0=49;MQRankSum=1.919;QD=1.54;ReadPosRankSum=0.473;VQSLOD=0.7416;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:25:11.93:0,12,142	0/0:9,0:9:14.13:0,14,149	1/1:49,0:3:4.97:35,5,0	0/0:45,0:4:8.51:0,9,70	0/1:9,15:25:27.16:175,0,27	0/0:12,0:12:23.93:0,24,156	0/0:10,0:9:16.23:0,16,112	0/0:26,0:25:53.24:0,53,392	0/0:9,0:7:14.84:0,15,104	0/0:16,0:14:23.21:0,23,174	0/0:15,0:14:35.63:0,36,247	0/0:9,0:9:17.14:0,17,102	0/0:12,0:7:14.90:0,15,133	0/0:9,0:9:26.43:0,26,180	0/0:11,0:8:17.39:0,17,108	0/0:7,0:7:15.52:0,16,97	0/0:19,0:14:23.55:0,24,131	0/0:12,0:9:15.51:0,16,135	0/0:21,0:16:42.97:0,43,287	0/0:16,0:15:39.99:0,40,267	0/0:6,0:6:14.72:0,15,75	0/0:13,0:11:32.84:0,33,277	0/0:5,0:3:6.01:0,6,56	0/0:15,0:14:19.11:0,19,209	0/0:17,0:15:43.04:0,43,283	0/0:19,0:17:34.14:0,34,274	0/0:23,0:23:49.83:0,50,310	0/0:39,0:35:78.63:0,79,573
chr10	63700381	.	G	GA	673.50	PASS	AB=0.958;AC=6;AF=0.107;AN=56;BaseQRankSum=3.669;DP=521;FS=7.283;HRun=10;HaplotypeScore=58.0347;InbreedingCoeff=0.5369;MQ=59.56;MQ0=15;MQRankSum=-0.199;QD=7.16;ReadPosRankSum=-1.086;VQSLOD=1.0362;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:17,16:32:10.85:518,11,0	1/1:2,7:9:24.06:256,24,0	0/1:41,0:12:15.28:15,0,107	0/0:30,0:5:6.83:0,7,63	0/0:16,0:16:14.67:0,15,123	0/0:11,0:11:29.95:0,30,244	0/0:19,0:19:41.92:0,42,345	0/0:19,0:19:50.91:0,51,414	0/0:12,0:12:11.96:0,12,98	0/0:20,0:20:35.91:0,36,293	0/0:18,0:17:29.93:0,30,246	0/0:12,0:12:23.93:0,24,197	0/0:6,0:7:17.01:0,17,129	0/0:14,0:14:25.99:0,26,203	0/1:10,1:10:14.09:14,0,98	0/0:11,0:10:23.97:0,24,197	0/0:29,0:29:47.87:0,48,390	0/0:26,1:27:10.72:0,11,289	0/0:16,0:15:32.61:0,33,270	0/0:24,0:25:52.96:0,53,425	0/0:5,0:4:5.99:0,6,49	0/0:14,0:15:15.71:0,16,218	0/0:22,0:22:41.86:0,42,344	0/0:16,0:15:20.94:0,21,172	0/0:21,0:21:14.68:0,15,123	0/0:28,0:28:59.50:0,59,492	0/0:25,0:26:43.85:0,44,351	0/0:8,0:8:23.97:0,24,197
chr10	63701075	.	A	AGTGTGT	6274.33	PASS	AB=0.800;AC=39;AF=0.750;AN=52;BaseQRankSum=-3.342;DP=555;FS=5.824;HRun=0;HaplotypeScore=140.9545;InbreedingCoeff=0.6916;MQ=69.01;MQ0=15;MQRankSum=-4.803;QD=16.60;ReadPosRankSum=-2.779;VQSLOD=3.5467;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:21:8.31:0,8,108	0/0:7,0:12:8.68:0,9,127	./.	./.	1/1:9,0:13:5.15:75,5,0	1/1:12,4:18:11.85:317,12,0	1/1:15,7:24:9.19:174,9,0	1/1:28,0:27:26.58:495,27,0	1/1:9,3:20:24.08:585,24,0	1/1:10,0:14:2.26:26,2,0	0/1:12,0:16:31.53:32,0,44	1/1:5,10:17:14.92:424,15,0	0/0:10,0:12:15.05:0,15,266	1/1:7,5:13:3.01:95,3,0	1/1:14,7:24:15.05:366,15,0	1/1:5,6:13:14.18:480,14,0	1/1:19,5:26:5.86:154,6,0	1/1:14,2:22:30.10:603,30,0	1/1:16,0:15:13.40:273,13,0	1/1:14,0:18:10.35:263,10,0	1/1:27,0:24:14.72:199,15,0	0/0:13,0:13:21.07:0,21,398	0/0:14,0:18:30.09:0,30,485	0/0:19,0:20:22.63:0,23,729	1/1:7,5:20:14.40:307,14,0	1/1:8,6:20:38.25:835,38,0	1/1:8,3:19:21.86:533,22,0	1/1:3,0:7:3.01:38,3,0
chr10	63703289	.	GAA	G	488.67	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=4.043;DP=565;FS=0.000;HRun=15;HaplotypeScore=73.2640;InbreedingCoeff=0.7254;MQ=64.71;MQ0=4;MQRankSum=-0.233;QD=8.28;ReadPosRankSum=4.799;VQSLOD=0.7742;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:15,29:47:13.86:518,14,0	1/1:6,6:12:8.54:79,9,0	0/0:25,0:11:17.15:0,17,174	0/0:19,0:12:15.17:0,15,127	0/0:24,0:29:70.56:0,71,778	0/0:16,0:16:36.07:0,36,440	0/0:13,0:16:26.43:0,26,332	0/0:24,1:30:41.19:0,41,636	0/0:11,1:14:7.42:0,7,274	0/0:15,1:17:0.61:0,1,253	0/0:11,0:17:32.36:0,32,263	0/0:13,0:14:33.07:0,33,387	0/0:17,1:19:18.14:0,18,473	0/0:18,0:19:30.04:0,30,439	0/0:23,0:25:24.49:0,24,557	0/0:14,0:16:35.06:0,35,387	0/0:23,0:26:44.52:0,45,586	0/0:14,0:14:24.08:0,24,321	0/0:14,1:16:6.61:0,7,333	0/0:21,0:21:37.89:0,38,444	0/0:13,1:17:8.11:0,8,295	0/0:13,0:15:23.54:0,24,263	0/0:16,0:16:24.08:0,24,326	0/0:30,0:32:59.17:0,59,741	0/0:11,0:11:27.09:0,27,354	0/0:19,1:23:13.89:0,14,395	0/0:20,0:25:59.15:0,59,717	0/0:9,0:13:20:0,20,272
chr10	63703568	.	GTT	G	6209.69	PASS	AB=0.596;AC=35;AF=0.625;AN=56;BaseQRankSum=-6.221;DP=486;FS=1.874;HRun=13;HaplotypeScore=74.6526;InbreedingCoeff=0.7469;MQ=83.81;MQ0=9;MQRankSum=-1.742;QD=20.29;ReadPosRankSum=4.981;VQSLOD=4.5390;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:6,2:27:42.38:42,0,68	0/0:1,0:5:0.79:0,1,10	0/0:44,0:23:29.96:0,30,316	0/0:36,0:23:11.88:0,12,342	0/0:3,0:22:50.25:0,50,211	1/1:0,20:21:50.82:477,51,0	1/1:0,11:11:33.05:320,33,0	0/0:8,0:28:24.20:0,24,250	1/1:2,10:11:27.04:262,27,0	1/1:1,14:16:44.78:419,45,0	1/1:3,12:15:26.36:267,26,0	1/1:1,14:15:42.05:407,42,0	0/0:13,0:13:36.12:0,36,509	1/1:5,6:11:17.73:157,18,0	1/1:2,20:21:54.07:524,54,0	1/1:3,12:16:23.94:282,24,0	1/1:2,12:15:36.67:334,37,0	1/1:1,14:15:42.06:407,42,0	1/1:6,15:21:45:429,45,0	1/1:6,19:26:57.62:543,58,0	0/1:1,1:3:3.08:24,0,3	0/0:6,0:6:12.02:0,12,140	0/0:15,0:18:45.10:0,45,597	0/0:8,0:8:21.07:0,21,300	1/1:0,7:7:21.03:204,21,0	1/1:5,16:21:47.99:458,48,0	1/1:0,21:21:54.09:524,54,0	0/1:4,6:10:20:127,0,20
chr10	63704205	.	T	TG	1175.74	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-1.353;DP=535;FS=3.109;HRun=6;HaplotypeScore=63.5587;InbreedingCoeff=0.9747;MQ=82.26;MQ0=0;MQRankSum=-2.898;QD=29.39;ReadPosRankSum=2.016;VQSLOD=4.5267;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:74.83:0,75,744	0/0:9,0:9:18.02:0,18,177	0/0:23,0:23:33.71:0,34,334	0/0:17,0:17:25.90:0,26,293	1/1:4,36:40:99:1271,102,0	0/0:18,0:18:51.10:0,51,514	0/0:10,0:10:24.05:0,24,245	0/0:39,0:39:93.18:0,93,941	0/0:21,0:21:60.14:0,60,612	0/0:18,0:18:54.11:0,54,543	0/0:17,0:17:51.11:0,51,516	0/0:7,0:7:21.05:0,21,214	0/0:14,0:14:39.09:0,39,398	0/0:9,0:9:27.06:0,27,275	0/0:19,0:19:48.10:0,48,489	0/0:7,0:7:18.04:0,18,183	0/0:26,0:26:60.09:0,60,602	0/0:19,0:19:45.10:0,45,459	0/0:20,0:20:57.13:0,57,582	0/0:21,0:21:60.13:0,60,611	0/0:22,0:22:57.12:0,57,581	0/0:14,0:14:39.08:0,39,396	0/0:22,0:22:57.11:0,57,575	0/0:18,0:18:45.08:0,45,450	0/0:12,0:12:27.05:0,27,275	0/0:19,0:19:42.09:0,42,428	0/0:20,0:20:57.13:0,57,581	0/0:23,0:22:69.16:0,69,704
chr10	63704781	.	C	CTCTT	16462.25	PASS	AB=1.000;AC=51;AF=0.911;AN=56;BaseQRankSum=-5.572;DP=606;FS=4.291;HRun=0;HaplotypeScore=116.1803;InbreedingCoeff=0.7077;MQ=59.81;MQ0=2;MQRankSum=3.059;QD=29.82;ReadPosRankSum=3.725;VQSLOD=4.9025;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,20:25:51.17:1236,51,0	1/1:1,9:12:24.08:580,24,0	1/1:16,1:8:3.02:62,3,0	0/0:24,0:20:19.32:0,19,256	0/1:65,0:65:99:280,0,443	1/1:28,0:28:33.11:622,33,0	1/1:17,0:17:27.09:506,27,0	0/0:29,0:28:48.13:0,48,667	1/1:28,0:28:33.11:618,33,0	1/1:18,0:18:39:583,39,0	1/1:25,2:27:62.95:1076,63,0	1/1:14,0:14:30.10:544,30,0	1/1:2,12:15:27.09:653,27,0	1/1:11,0:11:24.08:446,24,0	1/1:20,1:21:30.10:580,30,0	1/1:13,1:14:27.09:524,27,0	1/1:25,0:24:39.13:734,39,0	1/1:14,0:14:25.95:506,26,0	1/1:20,0:20:36.01:384,36,0	1/1:24,0:24:51.03:839,51,0	1/1:7,1:7:12:206,12,0	1/1:6,13:20:48.08:997,48,0	1/1:4,11:15:27.09:654,27,0	1/1:3,15:18:36.12:868,36,0	1/1:22,1:23:48.16:920,48,0	1/1:25,0:25:57.09:870,57,0	1/1:26,0:26:33.11:620,33,0	1/1:21,0:21:30.10:553,30,0
chr10	63704795	.	C	CTTTCT	20977.19	PASS	AB=1.000;AC=44;AF=0.786;AN=56;BaseQRankSum=-7.233;DP=651;FS=0.450;HRun=0;HaplotypeScore=125.5690;InbreedingCoeff=0.1499;MQ=58.74;MQ0=3;MQRankSum=1.669;QD=35.02;ReadPosRankSum=6.714;VQSLOD=4.2909;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:32:99:742,0,118	0/1:13,0:13:40.73:350,0,41	0/1:16,0:6:18.75:57,0,19	0/0:25,0:16:30.35:0,30,347	0/1:4,0:70:99:382,0,344	1/1:2,20:24:35.86:985,36,0	1/1:1,15:16:25.52:791,26,0	0/0:26,0:25:66.06:0,66,931	1/1:2,25:30:27.82:961,28,0	1/1:3,18:22:54.05:976,54,0	1/1:7,24:32:70.74:1640,71,0	1/1:1,12:14:30.10:826,30,0	0/1:16,0:16:37.70:397,0,38	1/1:0,10:13:24.08:702,24,0	1/1:2,15:18:30.10:843,30,0	1/1:1,17:18:27.09:756,27,0	1/1:4,24:31:42.14:1238,42,0	1/1:2,13:16:28.92:823,29,0	1/1:5,17:25:12.35:652,12,0	1/1:3,21:26:60.12:1388,60,0	1/1:1,10:11:12.04:277,12,0	0/1:22,0:22:99:533,0,111	0/1:18,0:18:37.24:397,0,37	0/1:19,0:19:10.13:490,0,10	1/1:2,18:22:48.16:1356,48,0	1/1:3,27:31:77.49:1623,77,0	1/1:1,20:22:33.11:938,33,0	1/1:3,14:19:30.10:854,30,0
chr10	63705676	.	G	GAC	1743.01	PASS	AB=0.601;AC=2;AF=0.036;AN=56;BaseQRankSum=-7.858;DP=408;FS=8.602;HRun=0;HaplotypeScore=49.6051;InbreedingCoeff=-0.0138;MQ=65.05;MQ0=1;MQRankSum=1.804;QD=27.23;ReadPosRankSum=-3.677;VQSLOD=2.6366;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:57.14:0,57,671	0/0:8,0:9:17.89:0,18,197	0/0:10,0:7:6.02:0,6,71	0/0:20,0:14:10.39:0,10,210	0/1:8,24:33:25.78:1095,0,26	0/0:18,0:18:33.08:0,33,388	0/0:13,0:13:27.07:0,27,317	0/1:13,17:31:13.04:737,0,13	0/0:12,0:12:27.08:0,27,330	0/0:17,0:17:39.08:0,39,459	0/0:6,0:6:15.05:0,15,183	0/0:8,0:8:21.05:0,21,244	0/0:12,0:12:36.11:0,36,440	0/0:8,0:8:24.08:0,24,293	0/0:18,0:19:50.94:0,51,583	0/0:12,0:12:27.08:0,27,330	0/0:36,0:36:78.21:0,78,926	0/0:14,0:17:41.78:0,42,454	0/0:13,0:13:33.09:0,33,392	0/0:14,0:14:39.12:0,39,477	0/0:16,0:16:42.13:0,42,513	0/0:4,0:4:12.04:0,12,147	0/0:13,0:13:16.62:0,17,283	0/0:6,0:6:9.03:0,9,110	0/0:5,0:5:9.01:0,9,96	0/0:13,0:13:33.10:0,33,403	0/0:13,0:14:38.95:0,39,453	0/0:4,0:4:12.04:0,12,147
chr10	63705841	.	CATT	C	874.78	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=0.270;DP=418;FS=2.351;HRun=0;HaplotypeScore=112.0662;InbreedingCoeff=0.8898;MQ=48.06;MQ0=10;MQRankSum=3.858;QD=21.34;ReadPosRankSum=-0.729;VQSLOD=3.5598;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:22:60.21:0,60,1357	0/0:12,0:12:36.12:0,36,830	0/0:9,0:4:12.04:0,12,271	0/0:11,0:6:15.05:0,15,327	1/1:2,39:41:55.86:970,56,0	0/0:13,0:10:27.09:0,27,621	0/0:11,0:9:24.08:0,24,551	0/0:19,0:18:48.16:0,48,1100	0/0:13,0:10:30.10:0,30,691	0/0:17,0:14:27.09:0,27,622	0/0:9,0:9:24.04:0,24,496	0/0:6,0:4:9.03:0,9,207	0/0:15,0:15:45.15:0,45,1035	0/0:14,0:13:39.13:0,39,891	0/0:20,0:16:39.05:0,39,800	0/0:11,0:10:30.10:0,30,691	0/0:15,0:11:30.10:0,30,691	0/0:8,0:7:21.07:0,21,484	0/0:19,0:14:36.12:0,36,826	0/0:10,0:8:24.08:0,24,540	0/0:9,0:9:20.99:0,21,386	0/0:12,0:12:33.11:0,33,758	0/0:14,0:14:42.10:0,42,894	0/0:20,0:20:57.20:0,57,1314	0/0:12,0:11:33.11:0,33,758	0/0:22,0:20:51.17:0,51,1109	0/0:20,0:16:42.10:0,42,919	0/0:13,0:12:36.11:0,36,781
chr10	63705882	.	TGAACCTCTG	T	7360.87	PASS	AC=36;AF=0.667;AN=54;BaseQRankSum=11.678;DP=332;FS=1.096;HRun=0;HaplotypeScore=124.9846;InbreedingCoeff=0.8796;MQ=49.01;MQ0=4;MQRankSum=-11.486;QD=40.89;ReadPosRankSum=0.646;VQSLOD=4.2317;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:72.25:0,72,3346	0/0:11,0:11:33.11:0,33,1388	0/0:14,0:12:36.12:0,36,1540	0/0:23,0:17:51.18:0,51,2137	0/0:12,0:11:33.11:0,33,1449	1/1:1,8:6:12.04:346,12,0	./.	1/1:2,17:19:51.13:1331,51,0	1/1:5,9:11:21.07:600,21,0	1/1:3,4:5:12.04:282,12,0	1/1:1,4:5:9.03:222,9,0	1/1:2,9:7:18.06:463,18,0	0/0:14,0:14:36.12:0,36,1732	1/1:4,3:6:15.05:372,15,0	1/1:2,15:12:30.09:807,30,0	1/1:3,3:5:12.04:300,12,0	1/1:5,5:6:2.60:90,3,0	1/1:6,5:10:18.06:454,18,0	1/1:6,6:9:18.06:460,18,0	1/1:2,3:4:6.02:181,6,0	1/1:9,3:12:7.79:129,8,0	0/0:5,0:5:12.04:0,12,547	0/0:7,0:7:21.07:0,21,962	0/0:36,0:36:99:0,105,4716	1/1:4,5:8:15.04:388,15,0	1/1:5,8:10:18.06:483,18,0	1/1:2,7:4:6.02:181,6,0	1/1:0,4:3:9.03:271,9,0
chr10	63705885	.	AC	A	1452.94	PASS	AC=36;AF=0.667;AN=54;BaseQRankSum=12.374;DP=320;FS=1.706;HRun=2;HaplotypeScore=97.6492;InbreedingCoeff=0.8445;MQ=49.37;MQ0=4;MQRankSum=-11.420;QD=8.70;ReadPosRankSum=0.248;VQSLOD=1.1318;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:72.24:0,72,1078	0/0:11,0:11:33.11:0,33,494	0/0:15,0:12:36.12:0,36,527	0/0:22,0:17:51.15:0,51,742	0/0:13,0:12:33.11:0,33,494	1/1:9,0:6:10.90:72,11,0	./.	1/1:17,0:17:44.95:282,45,0	1/1:11,1:9:19.33:130,19,0	1/1:5,2:5:11.01:96,11,0	1/1:5,0:5:4.99:18,5,0	1/1:9,2:7:15.54:111,16,0	0/0:12,0:12:36.12:0,36,539	1/1:3,3:5:14.43:141,14,0	1/1:16,1:12:27.64:165,28,0	1/1:4,2:5:11.01:96,11,0	1/1:8,1:5:2.48:9,2,0	1/1:6,4:9:18.04:120,18,0	1/1:7,3:7:16.25:114,16,0	1/1:4,1:4:5.40:25,5,0	1/1:7,4:11:1.19:7,1,0	0/0:5,0:5:15.03:0,15,203	0/0:7,0:7:21.07:0,21,313	0/0:39,0:39:99:0,117,1680	1/1:7,1:7:13.85:77,14,0	1/1:10,2:9:16:111,16,0	1/1:7,1:3:5.40:25,5,0	1/1:4,0:3:8.64:56,9,0
chr10	63705925	.	CT	C	6599.89	PASS	AB=0.773;AC=34;AF=0.630;AN=54;BaseQRankSum=11.085;DP=420;FS=7.559;HRun=2;HaplotypeScore=101.9838;InbreedingCoeff=0.8208;MQ=53.31;MQ0=7;MQRankSum=-5.442;QD=27.50;ReadPosRankSum=1.749;VQSLOD=3.9448;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,102,1529	0/0:7,0:7:21.07:0,21,315	0/0:4,0:2:3.01:0,3,45	0/1:12,0:10:2.07:2,0,155	0/0:17,0:16:45.14:0,45,654	1/1:1,13:11:30.10:389,30,0	0/1:2,10:10:26.76:177,0,27	0/0:34,0:34:90.24:0,90,1264	1/1:0,18:15:42.14:545,42,0	1/1:0,4:3:9.03:117,9,0	1/1:0,12:12:27.09:350,27,0	1/1:0,10:7:21.07:272,21,0	0/0:15,0:15:45.14:0,45,656	1/1:1,12:12:36.10:452,36,0	1/1:0,16:11:27.09:350,27,0	1/1:0,14:13:39.13:506,39,0	1/1:0,18:15:42.14:545,42,0	1/1:0,15:14:39.13:506,39,0	1/1:2,13:12:33.11:428,33,0	1/1:0,6:6:18.06:234,18,0	1/1:2,31:32:81.20:1029,81,0	0/0:10,0:10:30.10:0,30,450	0/0:8,0:8:24.08:0,24,359	0/0:48,0:48:99:0,138,2062	1/1:0,4:3:9.03:117,9,0	1/1:0,15:12:33.11:428,33,0	1/1:0,9:4:12.04:155,12,0	./.
chr10	63706045	.	TG	T	995.08	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=-1.739;DP=717;FS=0.000;HRun=2;HaplotypeScore=124.5748;InbreedingCoeff=0.6642;MQ=69.44;MQ0=0;MQRankSum=-0.122;QD=30.15;ReadPosRankSum=-3.556;VQSLOD=2.3513;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,160,2361	0/0:8,0:8:24.08:0,24,360	0/0:21,0:21:46.52:0,47,872	0/0:28,0:27:67.75:0,68,922	0/0:42,0:42:99:0,120,1798	0/0:14,0:14:39.11:0,39,562	0/0:27,0:27:75.25:0,75,1124	1/1:1,28:29:84.27:1087,84,0	0/0:29,0:29:84.23:0,84,1213	0/0:25,0:25:72.23:0,72,1060	0/0:10,0:10:24.08:0,24,359	0/0:32,0:31:90.26:0,90,1323	0/0:20,0:20:60.18:0,60,859	0/0:15,0:15:42.13:0,42,609	0/0:31,0:30:84.26:0,84,1216	0/0:22,0:22:63.21:0,63,943	0/0:43,0:43:99:0,123,1843	0/0:33,0:33:87.29:0,87,1304	0/0:22,0:22:63.20:0,63,919	0/0:13,0:13:39.12:0,39,564	0/0:61,0:61:99:0,169,2517	0/0:23,0:23:66.22:0,66,989	0/0:9,0:9:27.09:0,27,403	0/0:37,0:37:99:0,108,1569	0/0:12,0:12:36.12:0,36,540	0/0:24,0:24:66.21:0,66,945	0/0:30,0:30:84.28:0,84,1259	0/1:4,0:4:10.79:11,0,123
chr10	63706651	.	G	GAAAA	6092.52	PASS	AB=0.849;AC=42;AF=0.750;AN=56;BaseQRankSum=1.221;DP=595;FS=10.488;HRun=14;HaplotypeScore=112.8929;InbreedingCoeff=0.3406;MQ=61.21;MQ0=0;MQRankSum=-3.976;QD=11.60;ReadPosRankSum=-5.914;VQSLOD=-0.6383;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:42,0:43:1.90:2,0,695	0/0:8,0:8:14.84:0,15,151	0/1:29,0:19:14.49:14,0,91	0/0:12,0:9:1.62:0,2,7	1/1:12,33:50:44.76:557,45,0	1/1:20,4:26:59.03:765,59,0	1/1:5,8:16:9.03:167,9,0	0/1:7,0:30:48.30:143,0,48	0/1:4,13:17:9.78:122,0,10	1/1:17,3:21:40.49:547,40,0	1/1:24,1:26:38.97:510,39,0	1/1:4,8:12:5.95:83,6,0	0/1:12,0:13:10.54:11,0,120	1/1:15,1:15:36.05:503,36,0	1/1:4,10:16:8.16:89,8,0	1/1:8,19:27:15.02:246,15,0	1/1:8,16:26:5.93:73,6,0	1/1:2,8:10:9.03:196,9,0	1/1:19,0:17:27.02:307,27,0	1/1:8,0:23:32.92:360,33,0	1/1:5,0:11:3.01:37,3,0	0/1:16,0:19:25.90:26,0,169	0/0:18,0:20:19.39:0,19,364	0/0:27,0:28:33.52:0,34,460	1/1:6,9:15:6.02:131,6,0	1/1:7,0:28:59.92:675,60,0	1/1:20,0:18:38.61:398,39,0	1/1:3,5:7:5.68:130,6,0
chr10	63706731	.	C	CCAGCA	17300.58	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=14.021;DP=450;FS=11.654;HRun=0;HaplotypeScore=150.8196;InbreedingCoeff=0.9733;MQ=75.92;MQ0=0;MQRankSum=-14.984;QD=58.85;ReadPosRankSum=1.014;VQSLOD=5.3822;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,129,2875	0/0:13,0:13:36.09:0,36,681	0/0:20,0:19:51.17:0,51,1058	0/0:18,0:18:48.16:0,48,1046	1/1:15,25:40:48.05:1443,48,0	1/1:6,13:18:36.08:996,36,0	1/1:4,7:11:18.04:479,18,0	1/1:11,8:19:52.50:1329,53,0	1/1:2,8:8:21.07:626,21,0	1/1:6,16:18:44.35:1280,44,0	1/1:2,6:8:18.47:618,18,0	1/1:4,11:14:30.10:920,30,0	0/0:10,0:10:24.08:0,24,535	1/1:6,6:11:18.16:551,18,0	1/1:1,12:13:39.13:1187,39,0	1/1:6,11:17:39.90:1173,40,0	1/1:4,7:10:21.07:654,21,0	1/1:5,5:10:24.08:757,24,0	1/1:4,8:12:32.47:932,32,0	1/1:1,9:10:6.02:184,6,0	1/1:10,3:13:21.68:562,22,0	0/0:12,0:12:36.12:0,36,787	0/0:16,0:16:45.14:0,45,941	0/0:23,0:23:69.19:0,69,1492	1/1:3,11:14:33.11:970,33,0	1/1:6,12:17:45.07:1206,45,0	1/1:2,12:14:36.12:1098,36,0	1/1:2,3:5:15.05:335,15,0
chr10	63706734	.	C	CACACT	21432.03	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=12.857;DP=456;FS=1.734;HRun=0;HaplotypeScore=146.9766;InbreedingCoeff=0.9841;MQ=72.95;MQ0=0;MQRankSum=-14.009;QD=69.81;ReadPosRankSum=-0.373;VQSLOD=6.0826;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,129,2984	0/0:13,0:13:39.13:0,39,871	0/0:16,0:15:45.14:0,45,950	0/0:20,0:20:51.14:0,51,1088	1/1:8,25:36:69.22:2028,69,0	1/1:2,13:16:39.13:1244,39,0	1/1:4,7:11:27.09:823,27,0	1/1:18,8:30:84.29:2593,84,0	1/1:4,8:9:30.09:799,30,0	1/1:4,16:19:57.19:1736,57,0	1/1:2,6:9:21.07:668,21,0	1/1:4,11:14:36.08:1050,36,0	0/0:10,0:10:27.09:0,27,607	1/1:1,6:10:23.80:731,24,0	1/1:2,12:14:39.13:1232,39,0	1/1:4,10:16:42.14:1291,42,0	1/1:1,7:7:12.04:388,12,0	1/1:1,5:9:18.06:578,18,0	1/1:3,8:12:36.12:1132,36,0	1/1:7,9:16:18.06:463,18,0	1/1:3,3:13:13.29:382,13,0	0/0:11,0:11:33.11:0,33,749	0/0:13,0:13:39.13:0,39,905	0/0:23,0:23:69.24:0,69,1603	1/1:2,11:13:36.12:1071,36,0	1/1:5,12:16:48.16:1412,48,0	1/1:6,12:18:48.09:1359,48,0	1/1:0,3:5:15.05:451,15,0
chr10	63707954	.	AT	A	7955.15	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=4.102;DP=415;FS=2.514;HRun=3;HaplotypeScore=42.0379;InbreedingCoeff=0.9104;MQ=55.31;MQ0=19;MQRankSum=1.705;QD=30.02;ReadPosRankSum=1.553;VQSLOD=4.1058;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,114,1597	0/0:4,0:4:9.03:0,9,129	0/0:6,0:2:2.99:0,3,24	0/0:10,0:2:0.47:0,0,1	0/0:20,0:20:54.18:0,54,777	1/1:0,19:19:48.15:595,48,0	1/1:1,13:14:33.10:409,33,0	0/0:23,0:15:45.14:0,45,628	1/1:0,7:7:18.06:223,18,0	1/1:2,15:15:36.07:427,36,0	1/1:0,8:8:18.06:223,18,0	1/1:2,7:9:15.05:186,15,0	0/0:6,0:6:15.05:0,15,216	1/1:0,4:4:6.02:74,6,0	1/1:1,13:14:30.09:372,30,0	1/1:2,17:18:42.13:521,42,0	1/1:1,22:23:66.21:818,66,0	1/1:3,19:22:48.15:595,48,0	1/1:3,14:14:36.07:418,36,0	1/1:0,6:6:18.06:223,18,0	1/1:0,23:23:66.21:818,66,0	0/0:11,0:11:30.10:0,30,430	0/0:8,0:7:15:0,15,191	0/0:17,0:17:48.16:0,48,691	1/1:1,13:14:36.10:433,36,0	1/1:0,15:15:42.11:506,42,0	1/1:0,19:19:54.17:669,54,0	1/1:0,15:14:36.11:446,36,0
chr10	63708395	.	CG	C	5684.30	PASS	AC=50;AF=0.926;AN=54;BaseQRankSum=-0.856;DP=229;FS=22.175;HRun=4;HaplotypeScore=84.0647;InbreedingCoeff=0.4088;MQ=36.16;MQ0=0;MQRankSum=-1.732;QD=25.72;ReadPosRankSum=-0.230;VQSLOD=3.0779;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,24:25:69.19:787,69,0	1/1:0,3:3:6.90:73,7,0	./.	0/0:1,0:1:3:0,3,25	1/1:1,15:13:30.06:313,30,0	1/1:1,7:8:21.02:234,21,0	1/1:1,11:9:24.06:271,24,0	1/1:0,2:1:3.01:36,3,0	1/1:0,7:6:18.06:215,18,0	1/1:0,7:6:18.05:208,18,0	0/0:0,6:4:0:0,0,0	1/1:1,13:14:39.12:465,39,0	1/1:0,6:4:12.03:139,12,0	1/1:0,11:7:21.06:245,21,0	1/1:0,4:3:9.03:108,9,0	1/1:0,8:4:12.04:142,12,0	1/1:3,7:10:15.05:178,15,0	1/1:0,9:9:24.07:286,24,0	1/1:0,5:3:9.03:107,9,0	1/1:0,13:13:36.10:417,36,0	1/1:0,12:8:20.75:232,21,0	1/1:0,5:5:15.04:173,15,0	1/1:0,6:5:12.03:136,12,0	1/1:2,13:14:21.46:247,21,0	1/1:0,11:10:30.09:358,30,0	1/1:0,7:7:21.06:245,21,0	1/1:1,3:1:3.01:36,3,0	1/1:0,1:1:3.01:36,3,0
chr10	63708501	.	G	GA	771.54	PASS	AB=0.917;AC=34;AF=0.680;AN=50;BaseQRankSum=-1.257;DP=132;FS=3.468;HRun=16;HaplotypeScore=17.5392;InbreedingCoeff=0.3740;MQ=56.81;MQ0=4;MQRankSum=-1.896;QD=8.30;ReadPosRankSum=-0.368;VQSLOD=1.6070;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:20:31.91:0,32,238	0/0:4,0:3:5.87:0,6,46	0/1:10,0:5:11.91:12,0,31	0/1:13,0:8:3.49:3,0,21	1/1:2,0:8:11.30:78,11,0	1/1:0,3:3:3.01:32,3,0	1/1:6,0:6:9.01:88,9,0	0/1:4,4:8:6.59:123,0,7	1/1:1,0:1:3.01:30,3,0	1/1:3,4:6:9.02:95,9,0	1/1:2,0:2:3.48:32,3,0	./.	0/0:3,0:3:5.99:0,6,49	1/1:3,1:4:6.43:50,6,0	0/1:2,0:2:0:0,0,0	./.	1/1:6,0:6:8.97:81,9,0	1/1:8,0:8:6.01:61,6,0	1/1:3,0:3:1.13:57,1,0	1/1:2,0:2:0.47:1,0,0	1/1:2,0:2:6.02:63,6,0	0/0:2,0:2:3:0,3,25	0/0:4,1:5:5.97:0,6,49	0/0:4,0:4:8.98:0,9,73	1/1:0,5:5:2.97:20,3,0	1/1:2,0:2:6.01:62,6,0	./.	1/1:1,0:1:3.01:32,3,0
chr10	63708619	.	CA	C	2017.81	PASS	AB=0.633;AC=20;AF=0.357;AN=56;BaseQRankSum=8.711;DP=307;FS=2.690;HRun=1;HaplotypeScore=48.2483;InbreedingCoeff=-0.3091;MQ=63.87;MQ0=0;MQRankSum=-7.982;QD=10.97;ReadPosRankSum=2.448;VQSLOD=1.9534;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:81.28:0,81,1285	0/0:5,0:5:15.05:0,15,236	0/0:10,0:11:27.02:0,27,359	0/0:9,0:9:15.04:0,15,215	0/0:14,16:30:19.59:0,20,527	0/1:3,11:14:99:205,0,103	1/1:0,4:4:3.01:39,3,0	0/1:7,4:11:99:112,0,302	0/1:2,5:7:22.93:83,0,23	0/1:5,5:10:99:146,0,209	0/1:8,4:12:80.70:81,0,296	0/1:6,3:9:20.39:20,0,189	0/0:5,0:5:15.05:0,15,238	0/1:3,7:10:73.60:136,0,74	0/1:3,9:12:71.25:170,0,71	0/1:1,5:6:29.60:155,0,30	1/1:1,7:8:6.02:77,6,0	0/1:3,5:8:42.47:42,0,92	0/1:5,6:11:99:200,0,206	0/1:3,5:8:59.42:59,0,102	0/1:4,3:7:26.87:27,0,108	0/0:8,0:8:24.08:0,24,382	0/0:9,0:9:27.02:0,27,399	0/0:7,0:7:21.05:0,21,311	0/1:5,10:14:95.12:95,0,170	0/1:3,10:13:65.58:282,0,66	0/1:8,11:18:99:254,0,154	0/0:6,0:6:12.04:0,12,192
chr10	63709049	.	TTTTTG	T	3890.24	PASS	AB=0.978;AC=36;AF=0.643;AN=56;BaseQRankSum=5.324;DP=536;FS=8.225;HRun=0;HaplotypeScore=111.7435;InbreedingCoeff=0.1407;MQ=63.68;MQ0=18;MQRankSum=-5.296;QD=8.04;ReadPosRankSum=5.986;VQSLOD=0.8892;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:8,18:25:41.94:592,42,0	1/1:1,8:9:15.52:234,16,0	0/1:40,0:17:27.93:28,0,54	0/1:48,0:18:1.27:1,0,182	0/1:58,0:56:78.99:216,0,79	0/1:16,0:15:26.70:45,0,27	1/1:8,5:12:14.92:166,15,0	0/1:22,0:22:37.20:198,0,37	0/1:13,0:12:0.18:66,0,0	0/1:18,1:19:4.55:246,0,5	0/1:14,2:16:23.04:238,0,23	1/1:11,1:10:5.19:145,5,0	0/0:10,0:10:30.10:0,30,615	1/1:15,1:16:16.59:177,17,0	1/1:9,0:9:5.93:40,6,0	1/1:13,0:13:23.77:187,24,0	1/1:31,0:30:31.44:200,31,0	1/1:14,2:15:17.39:183,17,0	0/1:22,0:20:0.96:158,0,1	0/1:14,1:15:23.23:117,0,23	1/1:7,0:7:11.86:79,12,0	0/0:12,0:12:36.06:0,36,798	0/0:17,0:17:28.80:0,29,863	0/0:13,0:13:20.88:0,21,398	1/1:12,0:12:19.86:127,20,0	0/1:15,0:15:34.27:148,0,34	0/1:20,1:20:18.59:97,0,19	1/1:14,1:12:13.81:201,14,0
chr10	63709050	.	TTTTG	T	6852.78	PASS	AB=1.000;AC=46;AF=0.821;AN=56;BaseQRankSum=1.784;DP=529;FS=3.577;HRun=0;HaplotypeScore=94.3460;InbreedingCoeff=0.7478;MQ=62.75;MQ0=18;MQRankSum=-4.410;QD=14.34;ReadPosRankSum=2.054;VQSLOD=4.1671;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:24:41.94:465,42,0	1/1:9,0:9:15:156,15,0	0/1:39,0:16:14.46:23,0,14	0/1:49,0:18:2.40:2,0,146	1/1:54,3:55:71.24:664,71,0	1/1:3,13:15:8.56:138,9,0	1/1:10,2:11:18.05:231,18,0	1/1:9,14:23:44:449,44,0	1/1:5,8:12:14.02:200,14,0	1/1:8,11:19:39.09:561,39,0	1/1:8,8:16:29.98:368,30,0	1/1:10,0:8:14.96:153,15,0	0/0:10,0:10:30.04:0,30,465	1/1:13,2:15:33.58:311,34,0	1/1:2,7:9:6.02:92,6,0	1/1:3,9:12:24.08:359,24,0	1/1:6,25:30:35.98:471,36,0	1/1:4,12:15:17.58:250,18,0	1/1:17,6:21:29.89:338,30,0	1/1:7,8:15:12.06:299,12,0	1/1:2,5:7:12:158,12,0	0/0:12,0:12:33.06:0,33,644	0/0:17,0:17:39:0,39,682	0/0:12,0:12:17.88:0,18,296	1/1:8,4:12:23.91:282,24,0	1/1:6,9:15:28.53:321,29,0	1/1:9,11:19:17.23:204,17,0	1/1:9,6:12:29.94:359,30,0
chr10	63709051	.	TTTG	T	5810.76	PASS	AB=0.974;AC=43;AF=0.768;AN=56;BaseQRankSum=4.956;DP=525;FS=2.443;HRun=0;HaplotypeScore=89.9078;InbreedingCoeff=0.5309;MQ=61.81;MQ0=19;MQRankSum=-5.457;QD=12.26;ReadPosRankSum=3.579;VQSLOD=4.6348;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:24:41.59:358,42,0	1/1:8,0:9:14.83:127,15,0	0/1:36,0:15:12.04:67,0,12	0/1:49,0:18:21.34:21,0,104	1/1:38,20:56:99:1233,119,0	0/1:16,0:15:3.20:84,0,3	1/1:12,0:11:17.51:149,18,0	1/1:21,2:23:12.63:325,13,0	1/1:12,1:12:17.90:172,18,0	1/1:18,0:18:39.01:359,39,0	0/1:16,0:16:1.47:213,0,1	1/1:8,1:7:10.82:119,11,0	0/0:10,0:10:29.92:0,30,365	1/1:16,0:16:35.53:301,36,0	1/1:9,0:9:6.01:58,6,0	1/1:12,0:12:24.03:230,24,0	1/1:31,0:30:35.92:310,36,0	1/1:16,0:15:17.71:167,18,0	1/1:21,1:20:17.63:290,18,0	1/1:14,1:15:23.93:231,24,0	1/1:7,0:7:11.98:104,12,0	0/0:13,0:13:39:0,39,576	0/0:17,0:17:42.73:0,43,609	0/0:11,0:11:20.81:0,21,276	1/1:11,0:11:22.20:232,22,0	1/1:14,1:15:28.97:241,29,0	0/1:17,3:19:8.09:172,0,8	1/1:14,1:12:30.27:247,30,0
chr10	63709053	.	TG	T	4072.28	PASS	AB=0.936;AC=42;AF=0.750;AN=56;BaseQRankSum=5.562;DP=504;FS=1.095;HRun=1;HaplotypeScore=79.5345;InbreedingCoeff=0.4179;MQ=58.67;MQ0=19;MQRankSum=-6.760;QD=8.97;ReadPosRankSum=3.590;VQSLOD=1.3791;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:23,1:24:39.72:223,40,0	1/1:9,0:9:14.08:76,14,0	0/1:29,3:12:7.88:80,0,8	0/1:43,3:16:57.60:113,0,58	1/1:52,2:53:99:804,121,0	0/1:15,1:15:13.25:58,0,13	1/1:9,1:11:13.24:85,13,0	0/1:21,0:21:7.59:219,0,8	1/1:9,4:12:17.71:118,18,0	1/1:14,2:16:38.11:228,38,0	0/1:13,1:14:13.87:122,0,14	1/1:7,0:7:17.63:113,18,0	0/0:10,0:10:12.03:0,12,144	1/1:13,3:16:26.38:235,26,0	1/1:7,2:9:5.95:43,6,0	1/1:9,2:12:23.50:145,23,0	1/1:29,2:30:35.19:210,35,0	1/1:16,0:15:17.20:98,17,0	1/1:21,0:19:17.65:245,18,0	1/1:12,2:14:26.50:176,26,0	1/1:7,0:7:14.67:91,15,0	0/0:13,0:13:38.90:0,39,365	0/0:16,0:16:45.37:0,45,404	0/0:11,0:11:17.45:0,17,139	1/1:8,2:10:26.29:165,26,0	1/1:13,1:14:27.73:171,28,0	0/1:17,2:19:19.85:82,0,20	1/1:15,0:12:30.71:174,31,0
chr10	63709055	.	TTTG	T	2153.44	PASS	AB=0.990;AC=40;AF=0.714;AN=56;BaseQRankSum=6.988;DP=498;FS=16.527;HRun=0;HaplotypeScore=95.8155;InbreedingCoeff=0.2493;MQ=57.51;MQ0=18;MQRankSum=-2.484;QD=4.82;ReadPosRankSum=6.234;VQSLOD=0.5200;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:26,2:26:31.80:212,32,0	1/1:9,0:9:9.79:38,10,0	0/1:33,0:12:50.91:51,0,58	0/1:45,0:15:6.87:7,0,143	0/1:50,0:48:68.30:157,0,68	1/1:16,0:15:10.26:52,10,0	1/1:12,0:11:16.76:105,17,0	0/1:21,0:21:39.71:94,0,40	1/1:12,1:12:10.05:76,10,0	1/1:14,0:14:26.93:180,27,0	1/1:14,0:14:27.69:143,28,0	0/1:9,0:7:5.96:36,0,6	0/0:10,0:10:30.01:0,30,420	0/1:17,0:17:34.15:134,0,34	1/1:9,0:9:5.96:46,6,0	1/1:11,1:12:23.43:147,23,0	1/1:31,0:30:25.61:154,26,0	1/1:16,0:15:15.53:78,16,0	0/1:20,0:18:21.16:53,0,21	1/1:13,0:13:8.63:111,9,0	1/1:8,0:8:2.02:42,2,0	0/0:14,0:14:36.12:0,36,741	0/0:15,0:15:42.14:0,42,815	0/0:12,0:12:17.89:0,18,321	1/1:10,0:10:13.36:146,13,0	0/1:11,1:12:8.77:115,0,9	1/1:19,1:19:7.81:59,8,0	1/1:15,0:12:5.44:96,5,0
chr10	63709567	.	TA	T	5254.08	PASS	AB=0.950;AC=40;AF=0.714;AN=56;BaseQRankSum=6.982;DP=529;FS=0.000;HRun=13;HaplotypeScore=53.3106;InbreedingCoeff=0.8181;MQ=58.23;MQ0=4;MQRankSum=1.369;QD=12.91;ReadPosRankSum=3.997;VQSLOD=4.8881;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,109,1048	0/0:4,0:4:7.92:0,8,50	0/0:5,0:2:2.90:0,3,16	0/1:4,0:3:3.98:4,0,15	1/1:6,0:39:26.67:124,27,0	1/1:3,17:20:38.74:284,39,0	1/1:0,8:8:17.90:131,18,0	0/0:33,0:30:71.78:0,72,640	1/1:3,10:13:32.78:238,33,0	1/1:9,15:23:9.25:224,9,0	1/1:3,21:24:50.57:367,51,0	1/1:6,8:14:20.83:153,21,0	0/0:11,0:11:26.94:0,27,238	1/1:5,7:12:13.10:78,13,0	1/1:1,20:21:53.69:393,54,0	1/1:4,17:21:44.73:328,45,0	1/1:5,26:31:59.27:436,59,0	1/1:1,26:28:72.44:528,72,0	1/1:4,7:10:20.84:153,21,0	1/1:3,17:21:46.65:329,47,0	1/1:2,12:16:36.88:252,37,0	0/1:8,1:9:3.88:4,0,128	0/0:8,0:8:21.02:0,21,199	0/0:17,0:17:42.05:0,42,403	1/1:3,24:28:49.68:356,50,0	1/1:7,15:22:38.65:282,39,0	1/1:7,16:23:41.73:306,42,0	1/1:3,14:18:17.58:283,18,0
chr10	63710238	.	CT	C	3772.39	PASS	AB=0.875;AC=38;AF=0.679;AN=56;BaseQRankSum=6.945;DP=498;FS=0.447;HRun=13;HaplotypeScore=57.0687;InbreedingCoeff=0.7527;MQ=70.13;MQ0=4;MQRankSum=0.304;QD=11.36;ReadPosRankSum=3.009;VQSLOD=3.3460;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,1:25:27.72:0,28,419	0/0:4,0:9:11.31:0,11,63	0/1:33,1:16:16.31:16,0,65	0/0:20,0:13:0.09:0,0,8	0/0:38,0:38:90.04:0,90,833	1/1:3,15:18:38.77:285,39,0	1/1:2,13:18:35.90:236,36,0	0/0:38,0:37:55.62:0,56,503	1/1:5,9:14:20.65:144,21,0	1/1:4,20:24:61.20:441,61,0	1/1:4,11:14:23.79:175,24,0	1/1:2,5:7:11.90:87,12,0	0/0:14,0:14:27.04:0,27,263	1/1:2,5:7:11.92:88,12,0	1/1:2,14:16:38.77:284,39,0	1/1:6,13:19:26.91:181,27,0	1/1:3,15:18:35.68:258,36,0	1/1:5,8:15:18.95:121,19,0	1/1:10,14:23:11.57:237,12,0	1/1:4,18:22:18.34:287,18,0	1/1:2,1:3:2.97:22,3,0	0/1:5,2:7:6.97:7,0,88	0/0:10,0:10:24.03:0,24,229	0/0:11,0:11:23.99:0,24,224	1/1:2,14:16:26.76:251,27,0	1/1:4,7:11:20.85:152,21,0	1/1:9,16:24:38.73:283,39,0	1/1:5,12:18:8.66:218,9,0
chr10	63710397	.	A	ACTGAGCCGT	29075.11	PASS	AB=0.964;AC=42;AF=0.750;AN=56;BaseQRankSum=-6.207;DP=410;FS=1.596;HRun=0;HaplotypeScore=97.8341;InbreedingCoeff=0.7601;MQ=56.02;MQ0=1;MQRankSum=-11.988;QD=85.52;ReadPosRankSum=-0.348;VQSLOD=4.8437;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:57.17:0,57,1673	0/1:12,0:13:85.11:85,0,1055	0/1:13,0:10:11.02:11,0,516	0/0:8,0:6:18.06:0,18,514	1/1:13,25:44:69.24:3270,69,0	1/1:4,9:17:27.09:1318,27,0	1/1:6,6:17:30.10:1190,30,0	1/1:15,12:30:78.21:2911,78,0	1/1:2,10:14:33.11:1519,33,0	1/1:3,8:12:36.06:1476,36,0	1/1:4,7:12:30.10:1445,30,0	1/1:1,2:4:3.86:289,4,0	0/0:9,0:9:27.09:0,27,834	1/1:2,11:15:39.13:1758,39,0	1/1:3,7:12:27.09:1283,27,0	1/1:9,10:19:54.19:2332,54,0	1/1:6,6:14:30.10:1414,30,0	1/1:3,9:12:27.09:1321,27,0	1/1:8,3:14:42.14:1339,42,0	1/1:5,6:11:15.05:732,15,0	1/1:10,1:14:6.02:249,6,0	0/0:7,0:7:21.07:0,21,600	0/0:10,0:10:24.08:0,24,722	0/0:15,0:15:42.14:0,42,1258	1/1:3,7:10:30.10:1386,30,0	1/1:2,9:12:36.09:1486,36,0	1/1:9,9:20:42.14:1820,42,0	1/1:0,3:6:9.03:440,9,0
chr10	63710705	.	CT	C	2375.31	PASS	AB=0.796;AC=38;AF=0.679;AN=56;BaseQRankSum=-3.334;DP=467;FS=0.000;HRun=14;HaplotypeScore=74.0905;InbreedingCoeff=0.2206;MQ=68.52;MQ0=10;MQRankSum=0.309;QD=6.11;ReadPosRankSum=-0.023;VQSLOD=2.4244;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:17,5:23:18.18:193,18,0	1/1:2,4:6:14.50:88,14,0	0/0:24,0:13:4.97:0,5,53	0/1:32,0:14:6.88:7,0,8	1/1:22,13:35:9.50:208,9,0	0/1:6,7:13:15.97:49,0,16	1/1:5,8:13:17.72:101,18,0	0/1:26,3:30:34.75:66,0,35	1/1:8,5:13:21.55:141,22,0	0/1:9,5:14:31.94:99,0,32	1/1:4,11:14:2.44:157,2,0	0/1:14,2:15:32.33:43,0,32	0/0:12,0:9:16.39:0,16,123	1/1:6,3:9:7.99:74,8,0	0/1:13,4:17:25.31:94,0,25	1/1:11,2:14:6.87:138,7,0	0/1:21,6:27:3.99:229,0,4	1/1:7,1:8:5.81:35,6,0	1/1:11,6:18:1.58:112,2,0	1/1:6,8:15:25.72:170,26,0	1/1:6,3:9:4.40:24,4,0	0/0:6,0:7:9.01:0,9,84	0/0:14,1:15:15.46:0,15,285	0/0:20,0:20:27.70:0,28,227	1/1:6,2:8:9.15:65,9,0	1/1:18,8:27:43.84:277,44,0	1/1:11,4:14:2.53:88,3,0	0/1:3,7:11:8.01:89,0,8
chr10	63710722	.	TTC	T	336.46	PASS	AB=0.949;AC=16;AF=0.286;AN=56;BaseQRankSum=3.055;DP=435;FS=16.268;HRun=0;HaplotypeScore=72.4095;InbreedingCoeff=-0.3990;MQ=49.07;MQ0=16;MQRankSum=0.249;QD=1.28;ReadPosRankSum=0.186;VQSLOD=0.3731;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:22:20.49:20,0,256	0/1:9,0:9:18.28:18,0,98	0/1:10,0:3:3.91:4,0,24	0/1:20,0:6:1.17:1,0,4	0/1:29,0:28:1.99:2,0,240	0/0:11,0:10:4.63:0,5,77	0/0:14,0:14:12.25:0,12,190	0/0:20,0:20:2.39:0,2,190	0/0:14,0:14:7.90:0,8,130	0/0:12,0:12:1.12:0,1,152	0/0:16,0:14:31.40:0,31,238	0/1:13,0:12:20.95:21,0,73	0/1:13,0:10:28.70:29,0,70	0/1:10,0:9:22.52:23,0,55	0/0:17,1:18:0.22:0,0,236	0/1:17,1:17:56.13:56,0,106	0/1:31,2:32:94.94:95,0,193	0/1:5,6:10:17.07:39,0,17	0/1:17,0:17:15.14:15,0,173	0/0:17,0:16:16.03:0,16,266	0/0:7,0:7:9.89:0,10,94	0/1:6,0:6:5.96:6,0,78	0/0:15,0:15:5.44:0,5,222	0/0:18,0:18:9.87:0,10,252	0/1:10,0:9:9.58:10,0,48	0/1:16,11:27:99:111,0,208	0/1:14,1:14:27.32:27,0,132	0/0:10,0:9:20.31:0,20,150
chr10	63715777	.	G	GA	4807.40	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=1.480;DP=376;FS=0.466;HRun=9;HaplotypeScore=50.9122;InbreedingCoeff=0.8600;MQ=58.58;MQ0=14;MQRankSum=-3.875;QD=20.20;ReadPosRankSum=0.580;VQSLOD=5.1733;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:83.96:0,84,729	0/0:1,0:1:3:0,3,26	0/0:13,0:4:11.55:0,12,81	0/0:14,0:8:11.32:0,11,125	0/0:14,0:13:35.97:0,36,308	1/1:4,7:11:21.06:232,21,0	1/1:2,8:9:21.06:232,21,0	0/0:17,0:17:44.99:0,45,390	1/1:7,11:18:30.07:326,30,0	1/1:2,13:15:39.11:431,39,0	1/1:2,7:8:15.04:166,15,0	1/1:6,5:11:21.77:192,22,0	0/0:11,0:11:26.98:0,27,234	1/1:1,5:5:11.98:132,12,0	1/1:3,11:14:24.06:265,24,0	1/1:2,8:10:24.06:265,24,0	1/1:8,24:31:65.21:668,65,0	1/1:7,19:23:0.95:417,1,0	1/1:4,13:17:41.65:427,42,0	1/1:1,8:9:24.06:264,24,0	1/1:2,6:8:15.04:160,15,0	0/0:2,0:1:3:0,3,26	0/0:9,0:8:18:0,18,156	0/0:23,0:23:53.80:0,54,465	1/1:1,2:2:3.01:33,3,0	1/1:6,12:13:21.06:232,21,0	1/1:8,7:15:18.05:199,18,0	1/1:0,5:5:15.04:166,15,0
chr10	63716248	.	TCAAC	T	448.23	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.146;DP=654;FS=1.070;HRun=0;HaplotypeScore=103.5465;InbreedingCoeff=0.9900;MQ=71.64;MQ0=0;MQRankSum=-1.441;QD=17.93;ReadPosRankSum=-2.785;VQSLOD=2.7188;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:44:99:0,120,2794	0/0:6,0:6:18.05:0,18,397	0/0:26,0:24:30.01:0,30,603	0/0:29,0:29:59.17:0,59,1267	0/0:25,0:25:66.15:0,66,1492	0/0:17,0:17:48.12:0,48,1106	0/0:21,0:21:45.11:0,45,1032	1/1:12,13:25:36.10:543,36,0	0/0:18,0:18:45.15:0,45,1102	0/0:24,0:24:45.15:0,45,1107	0/0:16,0:16:45.15:0,45,1078	0/0:28,0:28:72.21:0,72,1653	0/0:20,0:20:54.19:0,54,1313	0/0:19,0:19:45.15:0,45,1105	0/0:26,0:26:63.20:0,63,1461	0/0:14,0:14:36.12:0,36,863	0/0:36,0:36:87.17:0,87,1986	0/0:27,0:27:63.19:0,63,1502	0/0:24,0:24:42.07:0,42,833	0/0:17,0:17:39.13:0,39,957	0/0:49,0:49:99:0,114,2678	0/0:15,0:15:42.13:0,42,962	0/0:18,0:18:45.15:0,45,1109	0/0:38,0:38:93.29:0,93,2146	0/0:16,0:16:45.11:0,45,962	0/0:21,0:21:57.20:0,57,1401	0/0:22,0:22:45.14:0,45,1060	0/0:12,0:12:27.09:0,27,665
chr10	63717040	.	TA	T	9713.81	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=8.097;DP=523;FS=10.821;HRun=8;HaplotypeScore=50.9667;InbreedingCoeff=0.9976;MQ=83.15;MQ0=0;MQRankSum=-3.140;QD=24.59;ReadPosRankSum=3.095;VQSLOD=5.1079;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:69.14:0,69,800	0/0:11,0:11:27.07:0,27,312	0/0:20,0:20:51.14:0,51,589	0/0:9,0:9:20.93:0,21,232	1/1:2,21:23:54.08:521,54,0	1/1:3,26:29:66.11:637,66,0	1/1:3,14:17:39.06:377,39,0	1/1:1,30:31:90.14:869,90,0	1/1:3,11:14:33.04:319,33,0	1/1:1,20:21:60.10:579,60,0	1/1:2,19:21:51.07:492,51,0	1/1:0,13:13:27.04:261,27,0	0/0:16,0:16:45.12:0,45,523	1/1:1,9:10:27.04:261,27,0	1/1:1,15:16:39.06:377,39,0	1/1:2,18:20:48.07:464,48,0	1/1:1,18:19:45.07:435,45,0	1/1:2,15:17:42.07:406,42,0	1/1:0,25:25:75.10:718,75,0	1/1:2,26:28:71.25:694,71,0	1/1:2,20:22:57.09:550,57,0	0/0:16,0:16:48.15:0,48,580	0/0:18,1:19:22.18:0,22,551	0/0:13,0:13:36.11:0,36,435	1/1:1,9:10:27.04:261,27,0	1/1:3,21:24:63.07:596,63,0	1/1:2,23:25:69.11:666,69,0	1/1:2,8:10:24.03:232,24,0
chr10	63717615	.	G	GT	6643.73	PASS	AB=0.809;AC=42;AF=0.750;AN=56;BaseQRankSum=2.860;DP=541;FS=15.728;HRun=10;HaplotypeScore=107.1476;InbreedingCoeff=0.5951;MQ=63.98;MQ0=4;MQRankSum=-4.486;QD=14.73;ReadPosRankSum=-2.133;VQSLOD=3.2276;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:18,13:28:47.42:372,0,47	1/1:4,11:15:38.52:389,39,0	0/0:28,0:13:19.58:0,20,120	0/1:39,0:20:36.45:36,0,73	1/1:28,0:28:45.79:276,46,0	1/1:5,3:7:12.02:123,12,0	1/1:8,13:21:26.40:457,26,0	1/1:19,0:22:20:114,20,0	1/1:8,3:11:21.52:224,22,0	1/1:11,9:16:28.85:289,29,0	0/1:13,18:33:2.46:638,0,2	1/1:4,7:11:30.07:318,30,0	0/0:12,0:12:22.61:0,23,177	1/1:10,6:16:17.14:316,17,0	1/1:10,2:12:15.03:159,15,0	1/1:8,11:18:25.84:448,26,0	1/1:17,8:24:33.02:345,33,0	1/1:11,2:13:8.23:150,8,0	1/1:15,9:23:14.14:333,14,0	1/1:11,3:14:2.38:217,2,0	0/1:9,1:9:14.07:55,0,14	0/0:12,0:12:26.92:0,27,221	0/0:20,0:20:50.93:0,51,419	0/0:17,0:16:37.44:0,37,292	1/1:12,4:16:17.43:370,17,0	1/1:9,12:19:36.09:383,36,0	1/1:12,11:18:38.05:362,38,0	1/1:11,5:16:27.02:270,27,0
chr10	63717623	.	T	TTTTG	1610.38	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=-6.737;DP=525;FS=5.657;HRun=0;HaplotypeScore=152.4752;InbreedingCoeff=-0.2425;MQ=62.37;MQ0=7;MQRankSum=2.894;QD=6.29;ReadPosRankSum=-6.260;VQSLOD=-0.0980;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:27:11.09:0,11,362	0/0:15,0:15:31.53:0,32,151	0/0:37,0:13:2.57:0,3,187	0/0:52,0:24:4.58:0,5,192	1/1:4,23:29:62.70:1118,63,0	0/0:7,0:6:5.91:0,6,51	0/1:21,0:21:22.24:22,0,186	0/1:24,0:22:97.76:105,0,98	0/0:10,0:10:0.66:0,1,46	0/0:17,0:12:6.46:0,6,89	0/1:32,0:32:33.03:33,0,332	0/0:12,0:12:23.99:0,24,130	0/0:12,0:12:26.17:0,26,405	0/1:16,0:16:34.12:34,0,127	0/0:10,0:10:10.60:0,11,61	0/1:19,0:18:77.68:122,0,78	0/1:18,0:18:67.78:68,0,85	0/1:11,0:11:8.98:9,0,83	0/1:22,0:20:99:101,0,132	0/1:11,0:11:10.30:10,0,116	0/1:12,0:11:42.93:43,0,135	0/0:10,0:10:27.09:0,27,459	0/0:18,0:18:51.15:0,51,832	0/0:17,0:16:45.12:0,45,673	0/1:15,0:15:24.32:24,0,117	0/1:17,0:15:38.15:38,0,83	0/0:21,0:16:28.03:0,28,175	0/1:9,0:9:38.42:38,0,65
chr10	63717636	.	GT	G	5196.09	PASS	AB=0.775;AC=38;AF=0.679;AN=56;BaseQRankSum=3.972;DP=523;FS=8.675;HRun=9;HaplotypeScore=103.8888;InbreedingCoeff=0.6706;MQ=60.17;MQ0=11;MQRankSum=-5.350;QD=16.34;ReadPosRankSum=1.156;VQSLOD=4.2230;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:9,17:23:55.94:477,56,0	1/1:5,8:13:33:294,33,0	0/0:53,0:13:0.05:0,0,87	0/0:70,1:26:22.79:0,23,215	0/0:23,0:23:51.13:0,51,584	0/1:3,3:5:1.86:70,0,2	1/1:5,13:18:39:349,39,0	1/1:4,16:18:42.02:383,42,0	1/1:8,2:10:21:191,21,0	1/1:3,15:15:38.98:343,39,0	1/1:14,13:28:54.43:462,54,0	1/1:11,3:14:11.12:225,11,0	0/0:11,0:11:20.27:0,20,211	1/1:10,2:12:22.78:175,23,0	1/1:4,4:8:18.01:164,18,0	0/0:15,0:14:8.51:0,9,325	1/1:11,4:15:10.51:167,11,0	1/1:9,4:13:24:215,24,0	0/1:16,3:17:0.97:248,0,1	0/1:6,4:10:10.92:166,0,11	1/1:7,6:12:18.94:165,19,0	0/0:11,0:11:27.08:0,27,312	0/0:18,0:18:49.66:0,50,573	0/1:15,3:17:10.96:11,0,330	1/1:9,4:13:32.95:290,33,0	1/1:7,7:13:29.75:255,30,0	1/1:10,13:18:40.76:386,41,0	1/1:4,3:7:18.01:162,18,0
chr10	63717696	.	A	AT	952.36	PASS	AB=0.796;AC=10;AF=0.179;AN=56;BaseQRankSum=-0.382;DP=515;FS=1.094;HRun=12;HaplotypeScore=72.6555;InbreedingCoeff=-0.2340;MQ=54.60;MQ0=9;MQRankSum=-5.290;QD=4.04;ReadPosRankSum=-0.088;VQSLOD=0.8605;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:19,15:32:99:292,0,188	0/0:8,0:9:20.48:0,20,142	0/0:10,0:7:7.19:0,7,51	0/0:6,0:5:8.65:0,9,63	0/0:21,0:21:47.42:0,47,338	0/0:16,0:17:43.80:0,44,312	0/0:17,0:21:49.66:0,50,319	0/0:24,0:25:43.11:0,43,298	0/0:14,0:17:19.75:0,20,194	0/1:19,3:21:45.74:46,0,197	0/0:19,0:19:44.06:0,44,311	0/0:15,0:15:35.70:0,36,258	0/0:7,0:8:16.92:0,17,115	0/0:14,0:15:35.62:0,36,252	0/1:15,7:22:91.32:91,0,174	0/0:15,0:15:17.96:0,18,202	0/1:19,13:28:99:209,0,141	0/1:17,1:25:9.83:10,0,219	0/1:19,8:29:99:141,0,212	0/1:7,2:9:8.32:8,0,108	0/1:11,5:18:95:95,0,178	0/1:13,4:17:42.08:42,0,153	0/0:12,1:13:3.65:0,4,190	0/1:12,8:18:99:159,0,130	0/0:11,0:12:28.85:0,29,203	0/0:19,0:19:42.82:0,43,296	0/0:24,0:24:50.97:0,51,366	0/0:3,0:3:5.97:0,6,44
chr10	63718252	.	C	CACAA	7490.72	PASS	AB=0.679;AC=39;AF=0.696;AN=56;BaseQRankSum=-3.160;DP=579;FS=18.231;HRun=0;HaplotypeScore=90.3025;InbreedingCoeff=0.6968;MQ=62.20;MQ0=3;MQRankSum=-3.286;QD=17.42;ReadPosRankSum=-0.624;VQSLOD=2.6797;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:57.42:0,57,594	0/1:5,0:5:24.43:24,0,109	0/0:20,0:13:22.35:0,22,274	0/0:24,0:21:56.06:0,56,611	1/1:16,0:16:31.77:330,32,0	1/1:5,12:18:22.73:406,23,0	1/1:1,19:25:18.05:393,18,0	1/1:30,0:28:80.86:702,81,0	0/1:1,16:18:2.92:339,0,3	1/1:19,1:19:44.93:583,45,0	1/1:2,1:8:11.94:147,12,0	1/1:1,11:17:12.01:217,12,0	0/0:22,0:22:21.23:0,21,496	1/1:4,19:24:9.23:188,9,0	1/1:3,24:32:32.64:791,33,0	1/1:0,2:10:12.03:275,12,0	0/1:3,27:32:10.91:259,0,11	1/1:3,17:23:7.65:608,8,0	1/1:18,0:18:32.82:565,33,0	1/1:2,8:11:23.88:261,24,0	1/1:5,32:43:3.01:84,3,0	0/0:13,0:13:35.79:0,36,380	0/0:16,0:16:35.93:0,36,518	0/0:24,0:24:59.95:0,60,629	1/1:1,14:15:6.49:118,6,0	1/1:0,16:20:53.83:664,54,0	1/1:5,20:28:14.76:264,15,0	1/1:1,8:13:12:270,12,0
chr10	63718445	.	T	TAAAAAAA	18941.87	PASS	AB=0.967;AC=53;AF=0.946;AN=56;BaseQRankSum=-4.788;DP=415;FS=1.334;HRun=5;HaplotypeScore=64.3327;InbreedingCoeff=0.2649;MQ=58.49;MQ0=3;MQRankSum=-2.701;QD=48.20;ReadPosRankSum=0.750;VQSLOD=0.8065;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,13:16:18.06:652,18,0	1/1:1,3:4:6.02:157,6,0	0/0:22,0:13:1.60:0,2,348	0/1:28,0:8:36.79:37,0,44	1/1:4,14:18:27.09:887,27,0	1/1:2,10:13:27.09:918,27,0	1/1:2,7:9:12.04:466,12,0	1/1:6,20:28:60.09:1287,60,0	1/1:1,11:12:21.07:759,21,0	1/1:2,18:20:54.57:1735,55,0	1/1:2,16:19:32.94:830,33,0	1/1:0,9:10:15.05:585,15,0	1/1:0,6:6:9.03:350,9,0	1/1:1,9:12:6.02:234,6,0	1/1:2,11:13:12.04:411,12,0	1/1:0,7:7:15.05:585,15,0	1/1:4,9:14:21:434,21,0	1/1:3,12:17:26.58:889,27,0	1/1:2,12:15:45.07:1017,45,0	1/1:5,13:19:23.95:604,24,0	1/1:1,3:4:6.02:164,6,0	1/1:4,0:4:9.02:196,9,0	1/1:4,7:12:18.01:500,18,0	1/1:2,5:7:9.03:314,9,0	1/1:3,21:26:33.11:1251,33,0	1/1:5,17:22:57.12:1355,57,0	1/1:4,16:20:32.96:1272,33,0	1/1:0,16:16:27.09:1055,27,0
chr10	63718787	.	G	GA	165.93	PASS	AB=0.920;AC=3;AF=0.054;AN=56;BaseQRankSum=-4.319;DP=494;FS=0.000;HRun=10;HaplotypeScore=80.9327;InbreedingCoeff=0.6140;MQ=62.17;MQ0=2;MQRankSum=-0.230;QD=5.35;ReadPosRankSum=0.379;VQSLOD=1.3258;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:34:86.52:0,87,697	1/1:0,8:8:24.06:256,24,0	0/0:3,0:3:8.99:0,9,73	0/0:10,0:9:19.30:0,19,136	0/0:20,0:20:53.93:0,54,443	0/0:22,0:22:65.91:0,66,539	0/0:14,0:14:32.94:0,33,271	0/1:21,2:22:13.04:13,0,319	0/0:23,0:24:52.97:0,53,425	0/0:21,0:22:49.97:0,50,400	0/0:12,0:13:38:0,38,301	0/0:16,1:17:18.96:0,19,362	0/0:22,0:22:37.20:0,37,423	0/0:11,0:11:26.96:0,27,222	0/0:16,1:17:15.96:0,16,337	0/0:13,0:13:35.64:0,36,282	0/0:15,0:15:38.91:0,39,313	0/0:26,0:26:62.84:0,63,512	0/0:18,0:20:48.22:0,48,363	0/0:17,0:16:41.93:0,42,345	0/0:22,0:22:59.92:0,60,490	0/0:7,0:7:17.59:0,18,147	0/0:12,0:13:25.97:0,26,200	0/0:16,0:16:38.91:0,39,314	0/0:15,0:15:35.95:0,36,296	0/0:32,1:32:71.84:0,72,584	0/0:24,0:23:53.92:0,54,443	0/0:12,0:12:29.96:0,30,246
chr10	63720062	.	TATAAATAAATAA	T	1773.66	PASS	AC=20;AF=0.625;AN=32;BaseQRankSum=5.166;DP=224;FS=7.544;HRun=0;HaplotypeScore=46.8271;InbreedingCoeff=0.5688;MQ=35.02;MQ0=35;MQRankSum=-2.910;QD=18.10;ReadPosRankSum=2.057;VQSLOD=0.4624;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:18:24.08:0,24,1206	0/0:5,0:5:3.01:0,3,172	./.	./.	0/0:9,0:9:6.49:0,6,352	1/1:11,4:15:9.03:280,9,0	./.	0/0:31,0:9:9.03:0,9,360	./.	1/1:8,3:9:5.71:177,6,0	./.	./.	0/0:8,0:7:6.02:0,6,351	1/1:3,2:5:6.02:207,6,0	./.	1/1:2,1:3:3.01:103,3,0	1/1:12,4:12:9.03:310,9,0	0/0:14,2:8:0.47:0,0,1	1/1:14,2:15:6.02:207,6,0	./.	./.	./.	./.	./.	1/1:5,2:6:6.02:176,6,0	1/1:8,2:8:6.02:207,6,0	1/1:6,2:7:6.02:177,6,0	1/1:3,4:6:3.01:54,3,0
chr10	63720218	.	GA	G	3180.48	PASS	AB=0.971;AC=35;AF=0.648;AN=54;BaseQRankSum=7.831;DP=387;FS=8.473;HRun=10;HaplotypeScore=46.5613;InbreedingCoeff=0.7472;MQ=67.47;MQ0=9;MQRankSum=-4.032;QD=14.26;ReadPosRankSum=2.480;VQSLOD=2.9954;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:39,1:40:70.17:0,70,982	0/0:1,0:1:3.01:0,3,33	0/1:33,1:13:12.60:13,0,76	0/0:37,0:11:14.71:0,15,115	0/0:2,0:2:6.02:0,6,66	1/1:1,9:10:15:130,15,0	1/1:1,10:11:26.92:226,27,0	0/0:45,1:45:88.24:0,88,1187	1/1:1,6:7:17.99:156,18,0	1/1:1,2:3:6:52,6,0	1/1:0,2:2:6:52,6,0	1/1:1,8:9:20.99:182,21,0	0/0:4,0:4:9.01:0,9,91	1/1:1,7:8:15:130,15,0	1/1:5,5:10:11.99:104,12,0	1/1:4,6:10:14.99:130,15,0	1/1:4,26:29:71.97:625,72,0	1/1:5,18:23:50.96:442,51,0	1/1:7,19:26:50.89:432,51,0	./.	1/1:0,10:10:24:208,24,0	0/0:2,0:2:3.01:0,3,33	0/0:3,0:3:9.02:0,9,99	0/0:25,0:25:63.14:0,63,679	1/1:2,1:2:3:26,3,0	1/1:1,2:3:8.99:76,9,0	1/1:5,12:17:23.65:207,24,0	1/1:1,6:7:21:182,21,0
chr10	63725486	.	AACACAC	A	3531.56	PASS	AB=0.889;AC=32;AF=0.667;AN=48;BaseQRankSum=3.015;DP=364;FS=16.999;HRun=0;HaplotypeScore=95.3255;InbreedingCoeff=0.3740;MQ=59.88;MQ0=5;MQRankSum=-5.786;QD=14.24;ReadPosRankSum=0.720;VQSLOD=1.4855;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:20,0:23:0.64:154,0,1	1/1:3,0:4:3.01:42,3,0	./.	./.	1/1:7,0:8:0.47:1,0,0	1/1:7,4:11:12:203,12,0	0/1:23,5:29:41.98:342,0,42	0/0:14,0:13:0:0,0,0	1/1:8,1:10:7.15:72,7,0	1/1:6,2:8:9.02:144,9,0	./.	1/1:11,9:21:39.08:654,39,0	0/0:6,0:6:3.01:0,3,50	1/1:4,6:10:18.06:364,18,0	1/1:15,8:23:27:421,27,0	1/1:7,5:12:15.05:283,15,0	./.	1/1:12,5:17:15.05:304,15,0	0/1:7,0:7:0.26:0,0,45	1/1:7,1:8:6.01:86,6,0	0/1:13,1:14:4.08:72,0,4	0/0:5,0:5:9.03:0,9,242	0/0:7,0:6:9.01:0,9,211	0/0:24,0:25:48.16:0,48,1398	0/1:6,1:7:8.03:55,0,8	0/1:18,1:19:0.28:71,0,0	1/1:6,2:8:9.03:180,9,0	1/1:5,1:6:6:85,6,0
chr10	63725541	.	A	AT	18104.08	PASS	AB=0.776;AC=54;AF=0.964;AN=56;BaseQRankSum=-4.238;DP=520;FS=0.000;HRun=1;HaplotypeScore=78.1752;InbreedingCoeff=-0.0446;MQ=78.67;MQ0=9;MQRankSum=-4.324;QD=34.82;ReadPosRankSum=3.205;VQSLOD=4.9032;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,37:42:98.33:1456,98,0	1/1:1,1:2:3.01:45,3,0	0/1:22,12:24:99:425,0,116	0/1:20,6:14:90.13:133,0,90	1/1:0,9:9:27.09:404,27,0	1/1:2,13:15:42.11:605,42,0	1/1:1,28:29:75.21:1099,75,0	1/1:2,17:17:48.16:719,48,0	1/1:0,15:15:42.14:629,42,0	1/1:2,14:16:48.06:647,48,0	1/1:1,4:5:15.05:220,15,0	1/1:1,30:31:84:1231,84,0	1/1:0,8:8:24.08:359,24,0	1/1:4,17:21:45.15:673,45,0	1/1:1,14:15:45.08:626,45,0	1/1:2,21:23:51.17:763,51,0	1/1:0,19:19:57.19:854,57,0	1/1:2,25:27:66.22:988,66,0	1/1:2,16:17:48.08:658,48,0	1/1:1,8:9:24.08:358,24,0	1/1:1,33:34:84.28:1257,84,0	1/1:1,9:10:21.07:315,21,0	1/1:0,9:9:24.08:360,24,0	1/1:2,28:30:72.24:1079,72,0	1/1:0,7:7:21.07:314,21,0	1/1:1,18:19:51.17:759,51,0	1/1:4,14:18:48.12:680,48,0	1/1:0,10:10:30.10:448,30,0
chr10	63726177	.	GC	G	802.73	PASS	AC=24;AF=1.000;AN=24;DP=161;FS=0.000;HRun=1;HaplotypeScore=23.2893;InbreedingCoeff=-0.1176;MQ=21.70;MQ0=5;QD=6.53;VQSLOD=0.5211;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,11:3:3.01:42,3,0	./.	./.	./.	./.	./.	./.	./.	1/1:1,7:2:2.97:20,3,0	./.	./.	1/1:0,17:1:3.01:42,3,0	1/1:1,7:3:9.02:108,9,0	1/1:1,11:4:9.03:116,9,0	1/1:2,6:3:9.02:108,9,0	1/1:2,5:3:8.97:87,9,0	1/1:1,10:5:9:105,9,0	1/1:1,9:4:6.02:80,6,0	1/1:0,4:2:6.02:84,6,0	./.	1/1:3,14:3:3.01:42,3,0	./.	./.	1/1:1,8:3:3.01:42,3,0	./.	./.	./.	./.
chr10	63726300	.	GA	G	2680.37	PASS	AB=0.835;AC=46;AF=0.958;AN=48;BaseQRankSum=-4.522;DP=116;FS=17.390;HRun=1;HaplotypeScore=23.2670;InbreedingCoeff=-0.1200;MQ=112.49;MQ0=0;MQRankSum=-4.416;QD=23.72;ReadPosRankSum=0.685;VQSLOD=1.8669;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,10:7:15.05:210,15,0	./.	0/1:10,3:12:77.44:77,0,188	0/1:10,2:10:3.27:53,0,3	1/1:0,1:1:3.01:42,3,0	./.	1/1:0,9:7:18.06:252,18,0	1/1:0,5:3:9.02:109,9,0	./.	1/1:0,3:3:9.03:126,9,0	1/1:0,2:2:6.02:84,6,0	1/1:0,2:2:6.02:84,6,0	1/1:1,0:1:2.90:16,3,0	1/1:0,4:4:9.03:123,9,0	1/1:0,3:3:9.03:126,9,0	1/1:0,5:4:12.04:168,12,0	1/1:0,2:2:6.02:84,6,0	1/1:0,3:3:6.02:84,6,0	1/1:0,5:4:12.02:135,12,0	1/1:0,1:1:3.01:42,3,0	1/1:0,10:9:24.08:335,24,0	1/1:0,1:1:3.01:36,3,0	1/1:0,2:2:2.72:42,3,0	1/1:0,6:6:12.04:168,12,0	1/1:0,3:3:3.01:42,3,0	1/1:0,2:2:6.02:84,6,0	1/1:0,8:7:18.06:251,18,0	./.
chr10	63727823	.	CT	C	7747.28	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=8.550;DP=534;FS=2.301;HRun=11;HaplotypeScore=54.4053;InbreedingCoeff=0.9707;MQ=67.61;MQ0=1;MQRankSum=-0.755;QD=20.12;ReadPosRankSum=3.698;VQSLOD=5.8365;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,20:22:56.91:468,57,0	1/1:1,7:8:14.97:123,15,0	0/0:11,0:8:14.46:0,14,115	0/0:8,0:7:4.70:0,5,32	0/0:31,2:33:57.80:0,58,798	1/1:2,15:17:38.94:320,39,0	1/1:2,13:15:35.94:296,36,0	0/0:20,0:20:47.33:0,47,481	1/1:1,14:15:38.95:320,39,0	1/1:4,25:29:71.90:589,72,0	1/1:3,24:28:64.93:523,65,0	1/1:1,11:12:32.96:271,33,0	0/0:19,0:19:45.11:0,45,473	1/1:1,9:10:23.97:197,24,0	1/1:2,17:19:44.86:362,45,0	1/1:0,17:17:44.95:369,45,0	1/1:0,23:24:61.93:493,62,0	1/1:1,12:13:29.96:246,30,0	1/1:3,19:22:56.90:464,57,0	1/1:6,25:31:42.90:559,43,0	1/1:1,11:12:29.96:246,30,0	0/0:21,0:21:57.14:0,57,601	0/0:22,2:25:25.72:0,26,655	0/0:12,0:12:26.88:0,27,261	1/1:1,24:25:68.91:567,69,0	1/1:4,18:23:55.92:442,56,0	1/1:2,30:33:79.95:646,80,0	1/1:0,10:10:29.97:246,30,0
chr10	63732928	.	TGTGGGTGTGTGC	T	105.02	PASS	AB=0.706;AC=1;AF=0.019;AN=54;BaseQRankSum=1.339;DP=548;FS=2.359;HRun=0;HaplotypeScore=205.1699;InbreedingCoeff=0.0427;MQ=58.23;MQ0=14;MQRankSum=-3.215;QD=2.92;ReadPosRankSum=-1.870;VQSLOD=2.4489;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:21,15:36:11.72:179,0,12	./.	0/0:40,0:21:11.77:0,12,176	0/0:32,0:14:11.96:0,12,202	0/0:18,0:14:6.02:0,6,190	0/0:19,0:19:42.14:0,42,1502	0/0:22,0:21:40.38:0,40,1254	0/0:27,0:27:48.16:0,48,1084	0/0:12,0:12:30.10:0,30,1210	0/0:17,0:17:24.08:0,24,1005	0/0:14,0:11:9.03:0,9,367	0/0:18,0:18:33.11:0,33,1250	0/0:4,0:4:9.03:0,9,422	0/0:18,0:18:42.14:0,42,1651	0/0:11,0:11:24.08:0,24,787	0/0:7,0:7:21.07:0,21,795	0/0:29,0:29:60.21:0,60,2127	0/0:21,0:21:46.94:0,47,1704	0/0:27,0:22:27.09:0,27,1060	0/0:15,0:14:36.11:0,36,1269	0/0:45,0:42:92.85:0,93,3301	0/0:7,0:7:12.03:0,12,312	0/0:11,0:11:24.07:0,24,892	0/0:18,0:18:29.68:0,30,1408	0/0:23,0:21:51.17:0,51,1741	0/0:28,0:27:45.15:0,45,1770	0/0:16,0:14:27.09:0,27,1078	0/0:9,0:7:15.05:0,15,620
chr10	63732930	.	TG	T	10570.42	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-0.500;DP=546;FS=8.473;HRun=3;HaplotypeScore=68.6765;InbreedingCoeff=0.9445;MQ=58.20;MQ0=14;MQRankSum=1.748;QD=30.20;ReadPosRankSum=6.662;VQSLOD=3.9093;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:35.36:0,35,410	0/0:4,0:3:3.01:0,3,43	0/0:39,0:22:48.56:0,49,535	0/0:31,0:13:17.01:0,17,246	0/0:17,0:13:21.07:0,21,295	1/1:0,18:18:45.14:557,45,0	1/1:2,19:20:46.43:592,46,0	0/0:27,0:27:78.25:0,78,1084	1/1:0,13:13:33.10:409,33,0	1/1:1,16:17:48.15:594,48,0	1/1:1,13:11:21.07:260,21,0	1/1:2,14:16:45.14:557,45,0	0/0:4,0:4:12.04:0,12,173	1/1:1,18:19:51.16:632,51,0	1/1:0,11:11:30.09:371,30,0	1/1:0,7:7:21.07:260,21,0	1/1:4,25:29:61.13:940,61,0	1/1:4,17:21:5.01:573,5,0	1/1:6,19:21:51.13:606,51,0	1/1:0,15:14:39.12:483,39,0	1/1:4,43:44:99:1470,120,0	0/0:8,0:8:24.07:0,24,315	0/0:11,0:11:33.11:0,33,466	0/0:19,0:19:45.15:0,45,636	1/1:1,22:21:60.19:743,60,0	1/1:3,25:27:72.23:892,72,0	1/1:0,16:15:36.11:446,36,0	1/1:0,9:7:15.05:186,15,0
chr10	63733136	.	GATAATATTA	G	11350.29	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=5.891;DP=291;FS=20.593;HRun=0;HaplotypeScore=115.7956;InbreedingCoeff=0.8712;MQ=62.17;MQ0=0;MQRankSum=-9.395;QD=59.74;ReadPosRankSum=3.137;VQSLOD=2.8890;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:21:57.18:0,57,2409	0/0:3,0:3:9.03:0,9,437	0/0:7,0:7:9.03:0,9,256	0/0:4,0:3:6.02:0,6,153	0/0:14,0:14:13.35:0,13,70	1/1:1,12:13:27.09:826,27,0	1/1:2,4:6:12.04:315,12,0	0/0:28,0:28:30.14:0,30,247	1/1:2,12:14:33.11:1010,33,0	1/1:5,15:20:56.67:1382,57,0	1/1:5,7:9:18.05:454,18,0	1/1:5,7:11:24.08:701,24,0	0/0:9,0:9:24.07:0,24,938	1/1:0,8:8:18.06:551,18,0	1/1:1,16:17:45.15:1377,45,0	1/1:5,8:13:36.09:900,36,0	1/1:2,3:5:12.43:261,12,0	1/1:2,2:4:9.01:152,9,0	1/1:2,10:12:33.02:606,33,0	1/1:1,11:12:24.05:663,24,0	1/1:1,2:3:3.01:40,3,0	0/0:1,0:1:3.01:0,3,88	0/0:8,0:8:21.07:0,21,1017	0/0:5,0:5:15.05:0,15,719	1/1:3,11:13:39.12:978,39,0	1/1:2,8:10:24.04:662,24,0	1/1:3,4:7:6.02:184,6,0	1/1:5,3:7:20.88:288,21,0
chr10	63733137	.	ATAATAT	A	6494.99	PASS	AB=1.000;AC=39;AF=0.696;AN=56;BaseQRankSum=9.274;DP=287;FS=21.413;HRun=0;HaplotypeScore=115.4052;InbreedingCoeff=0.8079;MQ=62.30;MQ0=0;MQRankSum=-9.052;QD=28.49;ReadPosRankSum=1.168;VQSLOD=3.0658;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:21:51.14:0,51,1598	0/0:3,0:3:9.03:0,9,310	0/0:7,0:7:6.02:0,6,138	0/0:4,0:3:6.02:0,6,119	1/1:3,11:14:27.09:528,27,0	1/1:13,0:13:27.09:377,27,0	1/1:6,0:6:9.03:126,9,0	1/1:9,19:28:57.13:1152,57,0	1/1:13,0:13:33.11:461,33,0	1/1:20,0:20:42.14:583,42,0	1/1:12,0:9:15.01:188,15,0	1/1:11,0:11:24.05:315,24,0	0/0:9,0:9:21.07:0,21,642	1/1:8,0:8:18.06:252,18,0	1/1:16,0:16:45.15:629,45,0	1/1:13,0:13:27.09:374,27,0	1/1:5,0:5:9.46:105,9,0	1/1:4,0:4:3.01:42,3,0	1/1:12,0:12:15.05:210,15,0	1/1:12,0:12:21.07:294,21,0	0/1:2,0:2:0:0,0,0	0/0:1,0:1:3.01:0,3,50	0/0:8,0:8:21.07:0,21,720	0/0:5,0:5:15.05:0,15,505	1/1:14,0:13:30.06:398,30,0	1/1:10,0:10:21.07:294,21,0	1/1:7,0:7:6.02:84,6,0	1/1:8,0:7:6.02:84,6,0
chr10	63733179	.	GT	G	2374.29	PASS	AB=0.781;AC=35;AF=0.625;AN=56;BaseQRankSum=5.392;DP=338;FS=4.952;HRun=13;HaplotypeScore=101.0401;InbreedingCoeff=0.4646;MQ=59.23;MQ0=4;MQRankSum=-6.616;QD=9.93;ReadPosRankSum=1.234;VQSLOD=3.1825;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:24:41.13:0,41,205	0/0:1,0:2:2.84:0,3,14	0/1:26,0:10:8.35:8,0,47	0/1:17,0:9:4.97:5,0,50	0/0:18,0:18:4.85:0,5,204	1/1:4,10:14:32.76:237,33,0	1/1:0,4:5:13.97:94,14,0	0/0:23,1:24:8.83:0,9,362	1/1:3,11:14:6.68:211,7,0	1/1:5,7:15:26.95:171,27,0	1/1:3,4:7:15.70:88,16,0	1/1:3,8:11:0.69:166,1,0	0/0:6,0:6:15.02:0,15,145	1/1:3,7:10:4.59:134,5,0	0/1:5,15:20:7.57:276,0,8	1/1:2,7:9:20.87:153,21,0	1/1:4,5:10:5.56:100,6,0	1/1:6,3:10:8.08:67,8,0	0/1:8,7:16:20.63:186,0,21	1/1:3,4:7:11.92:87,12,0	1/1:2,0:2:2.98:21,3,0	0/0:3,0:3:9.01:0,9,88	0/0:12,0:12:13.80:0,14,179	0/0:7,0:7:15.02:0,15,146	1/1:4,5:7:11.93:87,12,0	1/1:3,18:21:27.48:312,27,0	1/1:0,5:6:16.95:115,17,0	0/1:3,3:4:16.31:43,0,16
chr10	63733194	.	A	AT	437.76	PASS	AB=1.000;AC=5;AF=0.093;AN=54;BaseQRankSum=-0.806;DP=318;FS=0.912;HRun=6;HaplotypeScore=93.6344;InbreedingCoeff=0.5320;MQ=53.40;MQ0=3;MQRankSum=2.181;QD=9.73;ReadPosRankSum=-1.098;VQSLOD=1.0535;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:20,10:27:45.82:519,46,0	1/1:2,0:1:3:26,3,0	0/0:22,0:9:14.47:0,14,116	0/0:21,0:11:11.73:0,12,115	0/0:18,0:18:21.03:0,21,212	0/0:12,0:12:15.01:0,15,147	0/0:5,0:5:9.01:0,9,89	0/0:21,0:21:48.07:0,48,471	0/0:12,0:12:24.04:0,24,235	0/0:11,0:11:21.03:0,21,206	0/0:8,0:6:9.01:0,9,88	0/0:13,0:12:18.02:0,18,176	0/0:5,0:5:15.03:0,15,153	0/0:8,0:8:9.01:0,9,87	0/0:19,0:19:36.01:0,36,346	0/0:8,0:8:12.01:0,12,118	0/0:11,0:11:18.01:0,18,167	0/1:13,0:11:1.38:1,0,158	0/0:12,0:12:21.02:0,21,201	0/0:6,0:5:6:0,6,58	./.	0/0:4,0:4:9.02:0,9,91	0/0:9,0:9:24.04:0,24,244	0/0:6,0:6:18.04:0,18,183	0/0:7,0:4:3:0,3,29	0/0:20,0:20:42.07:0,42,415	0/0:7,0:7:21.04:0,21,208	0/0:7,0:5:6.01:0,6,60
chr10	63733236	.	GA	G	2082.73	PASS	AB=0.842;AC=36;AF=0.643;AN=56;BaseQRankSum=5.425;DP=339;FS=17.408;HRun=3;HaplotypeScore=56.0658;InbreedingCoeff=0.5065;MQ=41.31;MQ0=7;MQRankSum=-7.322;QD=9.87;ReadPosRankSum=0.773;VQSLOD=0.0521;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:30:63.17:0,63,883	0/0:2,0:2:3.01:0,3,43	0/0:26,0:7:14.41:0,14,167	0/0:33,0:6:12.04:0,12,153	0/1:21,0:21:6.78:7,0,33	1/1:6,4:10:9.03:111,9,0	1/1:4,2:4:6.02:74,6,0	0/1:30,0:30:17.01:17,0,23	1/1:1,3:4:6.02:74,6,0	1/1:2,6:7:15.05:186,15,0	1/1:4,6:9:3.01:37,3,0	1/1:4,9:12:21.07:260,21,0	0/0:4,0:4:6.02:0,6,86	1/1:4,2:6:3.01:37,3,0	1/1:7,4:11:9.03:111,9,0	1/1:4,3:7:6.02:74,6,0	1/1:5,4:9:9.03:111,9,0	1/1:6,7:11:11.74:148,12,0	1/1:5,5:6:15.05:185,15,0	1/1:6,3:8:6.02:74,6,0	0/1:7,3:9:7.92:99,0,8	0/0:13,0:13:30.10:0,30,432	0/0:7,0:7:12.04:0,12,172	0/0:11,0:11:30.10:0,30,428	1/1:1,4:5:12.04:148,12,0	1/1:8,6:13:15.05:185,15,0	0/1:4,8:12:15.20:257,0,15	1/1:0,3:2:6.02:74,6,0
chr10	63733238	.	AAG	A	1096.78	PASS	AB=0.656;AC=5;AF=0.089;AN=56;BaseQRankSum=-4.399;DP=333;FS=14.142;HRun=0;HaplotypeScore=61.2372;InbreedingCoeff=0.3111;MQ=41.50;MQ0=9;MQRankSum=-2.394;QD=19.24;ReadPosRankSum=-1.231;VQSLOD=2.3878;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:30:66.21:0,66,1153	0/0:2,0:2:3.01:0,3,56	0/0:25,0:6:14.99:0,15,204	0/0:32,0:5:12.04:0,12,222	0/1:10,11:21:25.90:341,0,26	0/0:10,0:10:8.04:0,8,32	0/0:6,0:4:5.36:0,5,21	1/1:9,22:30:60.19:859,60,0	0/0:3,0:3:5.36:0,5,21	0/0:10,0:9:19.36:0,19,112	0/0:8,0:7:5.31:0,5,46	0/0:11,0:10:13.34:0,13,60	0/0:4,0:4:6.02:0,6,112	1/1:5,0:5:0.47:1,0,0	0/0:9,0:9:2.64:0,3,17	0/0:7,0:7:5.36:0,5,21	0/0:9,0:9:7.87:0,8,31	0/0:12,0:10:10.71:0,11,43	0/0:10,0:6:12.67:0,13,49	0/0:8,0:7:5.36:0,5,21	0/0:11,0:10:14.05:0,14,107	0/0:13,0:13:30.10:0,30,560	0/0:7,0:7:12.01:0,12,190	0/0:12,0:11:30.02:0,30,522	0/0:6,0:6:13.72:0,14,80	0/0:14,0:13:14.93:0,15,66	0/0:12,0:12:21.52:0,22,126	0/0:3,0:2:5.36:0,5,21
chr10	63733369	.	C	CT	1122.04	PASS	AB=0.823;AC=30;AF=0.536;AN=56;BaseQRankSum=-0.231;DP=347;FS=7.521;HRun=15;HaplotypeScore=58.1415;InbreedingCoeff=0.1901;MQ=67.56;MQ0=11;MQRankSum=-3.619;QD=4.77;ReadPosRankSum=-0.687;VQSLOD=1.2538;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:25,1:26:0.22:0,0,110	0/1:5,0:5:4.79:5,0,57	0/0:21,0:15:3.95:0,4,50	0/0:16,0:12:11.23:0,11,59	0/0:5,0:18:27.34:0,27,88	1/1:1,2:6:11.67:79,12,0	0/1:7,7:14:21.83:81,0,22	0/0:13,0:19:12.09:0,12,35	1/1:3,1:3:3:25,3,0	1/1:11,1:11:11.91:87,12,0	0/1:8,1:9:9.06:35,0,9	1/1:3,5:6:3.52:59,4,0	0/0:5,0:5:5.69:0,6,34	1/1:5,2:6:8.92:63,9,0	1/1:4,4:8:8.99:75,9,0	0/1:9,4:12:23.22:80,0,23	0/1:10,4:9:52.63:53,0,55	0/1:10,8:14:8.90:144,0,9	1/1:10,3:10:11.96:95,12,0	0/1:13,1:15:6.24:46,0,6	0/1:11,6:15:0.62:86,0,1	0/0:6,0:6:8.71:0,9,54	0/0:8,0:7:14.63:0,15,90	0/0:18,0:17:23.28:0,23,142	1/1:9,2:12:0.91:67,1,0	1/1:11,4:13:2.83:116,3,0	0/1:8,3:13:36.87:77,0,37	1/1:1,0:1:2.97:20,3,0
chr10	63733461	.	T	TCCCCAG	5212.96	PASS	AC=32;AF=0.615;AN=52;BaseQRankSum=-1.251;DP=233;FS=3.198;HRun=0;HaplotypeScore=49.3637;InbreedingCoeff=0.8044;MQ=43.95;MQ0=9;MQRankSum=-8.536;QD=50.12;ReadPosRankSum=1.356;VQSLOD=4.6434;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:23:50.37:0,50,960	0/0:5,0:5:9.03:0,9,198	0/0:6,0:5:12.03:0,12,224	0/0:6,0:4:12.04:0,12,265	0/0:10,0:9:12.04:0,12,227	1/1:2,4:6:18.06:580,18,0	1/1:6,3:8:6.02:204,6,0	0/0:23,0:19:57.19:0,57,1206	./.	1/1:9,4:11:15.05:486,15,0	1/1:4,5:9:15.05:504,15,0	1/1:3,0:3:3.01:59,3,0	0/0:4,0:4:12.04:0,12,265	1/1:2,2:4:9.03:305,9,0	1/1:0,1:1:3.01:102,3,0	1/1:1,2:3:6.02:204,6,0	1/1:4,3:4:9.03:306,9,0	1/1:6,3:5:9.03:306,9,0	1/1:4,3:5:9.03:245,9,0	1/1:3,7:10:21.07:703,21,0	./.	0/0:10,0:10:21.07:0,21,463	0/0:12,0:12:21.07:0,21,463	0/0:23,0:22:36.12:0,36,767	1/1:5,4:9:12.04:407,12,0	1/1:4,3:6:12.04:394,12,0	1/1:0,2:2:6.02:204,6,0	1/1:2,2:4:6.02:204,6,0
chr10	63733799	.	GTGTTCCTCCAAGTTT	G	1072.24	PASS	AB=0.556;AC=1;AF=0.018;AN=56;BaseQRankSum=4.889;DP=496;FS=0.000;HRun=0;HaplotypeScore=191.6177;InbreedingCoeff=-0.0204;MQ=79.93;MQ0=0;MQRankSum=-4.406;QD=71.48;ReadPosRankSum=1.865;VQSLOD=2.8129;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:57.15:0,57,3390	0/0:4,0:4:9.03:0,9,494	0/0:17,0:17:42.14:0,42,1758	0/0:12,0:12:24.08:0,24,1665	0/0:29,0:29:84.76:0,85,5238	0/0:17,0:17:45.15:0,45,2681	0/0:11,0:11:33.11:0,33,1945	0/0:23,0:23:42.14:0,42,2745	0/0:18,0:18:41.79:0,42,2648	0/0:21,0:21:60.21:0,60,4018	0/0:22,0:22:54.19:0,54,3768	0/0:9,0:9:27.09:0,27,1906	0/0:14,0:14:39.13:0,39,2854	0/0:10,0:10:24.08:0,24,1593	0/0:21,0:21:51.18:0,51,3609	0/1:3,12:15:99:1147,0,190	0/0:18,0:18:45.15:0,45,3095	0/0:19,0:19:51.17:0,51,3382	0/0:19,0:19:42.14:0,42,2759	0/0:20,0:20:54.19:0,54,3967	0/0:15,0:15:42.14:0,42,2778	0/0:15,0:15:42.12:0,42,2808	0/0:21,0:21:60.21:0,60,4247	0/0:19,0:19:54.14:0,54,3458	0/0:22,0:22:63.22:0,63,4159	0/0:27,0:27:78.27:0,78,5569	0/0:18,0:18:45.15:0,45,2976	0/0:19,0:19:48.16:0,48,3529
chr10	63734141	.	TA	T	9817.76	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=4.584;DP=577;FS=4.206;HRun=10;HaplotypeScore=62.3410;InbreedingCoeff=0.9717;MQ=70.43;MQ0=0;MQRankSum=-2.492;QD=21.91;ReadPosRankSum=1.999;VQSLOD=5.9932;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:66.14:0,66,705	0/0:7,0:7:18.05:0,18,199	0/0:11,0:11:24.06:0,24,258	0/0:15,0:15:3.77:0,4,213	1/1:2,20:22:47.96:417,48,0	1/1:0,22:22:62.99:547,63,0	1/1:3,16:19:44.99:391,45,0	1/1:4,31:35:92.76:791,93,0	1/1:1,22:24:68.02:579,68,0	1/1:2,26:28:77.94:670,78,0	1/1:3,20:23:56.88:481,57,0	1/1:3,20:23:56.99:495,57,0	0/0:15,0:15:45.09:0,45,478	1/1:5,16:22:47.02:397,47,0	1/1:1,23:24:65.99:573,66,0	1/1:4,22:26:59.98:521,60,0	1/1:3,24:27:71.97:625,72,0	1/1:2,15:17:41.99:365,42,0	1/1:3,15:18:41.95:364,42,0	1/1:2,24:26:65.97:573,66,0	1/1:2,11:13:23.99:208,24,0	0/0:21,0:21:60.16:0,60,657	0/0:17,0:17:33.07:0,33,350	0/0:15,0:17:44.78:0,45,453	1/1:1,15:16:44.99:391,45,0	1/1:2,20:22:59.98:521,60,0	1/1:2,22:24:62.99:547,63,0	1/1:1,16:17:41.99:365,42,0
chr10	63735311	.	CTTTTTT	C	4320.41	PASS	AB=0.771;AC=28;AF=0.500;AN=56;BaseQRankSum=-2.327;DP=426;FS=5.298;HRun=18;HaplotypeScore=114.2744;InbreedingCoeff=0.1897;MQ=58.94;MQ0=17;MQRankSum=-4.477;QD=16.30;ReadPosRankSum=3.647;VQSLOD=0.8306;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:37:52.76:0,53,317	0/0:2,0:7:7.49:0,7,22	0/0:26,0:12:18.36:0,18,194	0/0:18,0:10:17.76:0,18,175	1/1:5,6:11:8.04:149,8,0	1/1:5,5:11:26.99:423,27,0	1/1:14,5:16:17.59:228,18,0	0/1:18,3:21:71.37:235,0,71	0/1:5,4:8:25.04:195,0,25	0/1:10,3:10:16.77:162,0,17	1/1:16,4:22:4.11:193,4,0	0/1:9,2:9:25.78:168,0,26	0/0:13,0:12:27.09:0,27,688	0/1:7,3:9:42.93:136,0,43	0/1:9,7:15:1.49:234,0,1	1/1:8,4:11:0.67:220,1,0	0/1:22,4:22:89.70:227,0,90	0/1:3,2:7:12.24:183,0,12	1/1:14,2:16:11.92:163,12,0	0/1:13,5:16:25.84:298,0,26	0/0:11,1:11:0.47:0,0,1	0/0:11,0:12:21.06:0,21,444	0/0:10,0:11:18.04:0,18,334	0/0:21,0:22:36.14:0,36,830	1/1:5,3:8:20.97:311,21,0	0/1:11,6:17:20.25:420,0,20	1/1:8,5:12:20.78:325,21,0	1/1:1,1:2:3:51,3,0
chr10	63735323	.	T	TGG	1289.91	PASS	AB=0.882;AC=19;AF=0.339;AN=56;BaseQRankSum=5.209;DP=432;FS=0.000;HRun=0;HaplotypeScore=112.3910;InbreedingCoeff=-0.5193;MQ=49.77;MQ0=28;MQRankSum=-1.709;QD=4.34;ReadPosRankSum=1.521;VQSLOD=2.6126;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:70.94:0,71,848	0/0:8,0:7:15:0,15,139	0/1:19,0:8:13.57:14,0,68	0/0:16,0:8:6.25:0,6,106	0/1:13,4:17:32.27:32,0,134	0/1:12,3:16:67.28:95,0,67	0/1:10,4:11:35.65:123,0,36	0/1:15,1:14:24.06:169,0,24	0/1:9,2:10:68.59:76,0,69	0/1:17,0:11:14.47:14,0,133	0/1:16,2:17:91.46:91,0,154	0/1:11,3:12:25.81:66,0,26	0/0:12,0:10:27.09:0,27,386	0/1:14,2:14:1.15:1,0,99	0/1:13,3:14:28.21:28,0,53	0/1:10,2:11:45.54:46,0,48	0/1:19,10:23:99:218,0,102	0/1:10,0:9:59.40:59,0,115	0/1:7,2:8:24.43:68,0,24	0/1:15,1:14:50.85:72,0,51	0/0:1,1:3:5.05:0,5,44	0/0:14,0:13:30.09:0,30,405	0/0:14,0:13:33.09:0,33,435	0/0:23,0:22:43.61:0,44,554	0/1:11,1:12:62.34:92,0,62	0/1:19,2:20:70.26:137,0,70	0/1:13,1:11:42.57:43,0,51	0/0:3,0:3:5.05:0,5,19
chr10	63735329	.	TGG	T	2017.96	PASS	AB=0.845;AC=22;AF=0.393;AN=56;BaseQRankSum=6.124;DP=414;FS=0.924;HRun=2;HaplotypeScore=102.8759;InbreedingCoeff=-0.4832;MQ=47.97;MQ0=29;MQRankSum=-2.266;QD=6.86;ReadPosRankSum=-1.750;VQSLOD=-0.3147;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:40:77.93:0,78,891	0/0:8,0:7:12.39:0,12,98	0/0:12,0:6:6.36:0,6,97	0/1:11,0:5:10.45:10,0,35	0/1:13,4:17:32.78:33,0,185	0/1:13,3:16:68.56:118,0,69	0/1:9,4:10:27.90:129,0,28	0/1:12,3:13:32.33:157,0,32	0/1:7,4:10:58.88:132,0,59	0/1:15,1:10:60.96:61,0,98	0/1:13,5:17:99:118,0,129	1/1:12,3:13:19.39:198,19,0	0/0:9,0:7:16.70:0,17,146	0/1:14,4:16:63.15:82,0,63	0/1:13,3:14:60.40:60,0,69	0/1:10,2:11:53.06:118,0,53	0/1:18,10:22:35.12:396,0,35	0/1:9,1:9:16.34:16,0,111	0/1:6,2:7:14.34:73,0,14	0/1:15,2:15:46.72:67,0,47	0/1:1,2:3:15.11:15,0,28	0/0:13,1:13:33.01:0,33,395	0/0:12,0:11:33.03:0,33,349	0/0:23,0:22:22.38:0,22,379	0/1:10,1:11:65.33:65,0,66	0/1:17,3:19:36.40:260,0,36	0/1:15,1:13:67.96:68,0,70	0/1:3,0:3:3.01:3,0,17
chr10	63735334	.	C	CTTTTT	7716.33	PASS	AB=0.917;AC=40;AF=0.741;AN=54;BaseQRankSum=0.361;DP=439;FS=0.592;HRun=7;HaplotypeScore=107.9431;InbreedingCoeff=0.6963;MQ=40.65;MQ0=29;MQRankSum=-4.918;QD=23.60;ReadPosRankSum=-3.997;VQSLOD=0.5106;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:39:63.03:0,63,1095	0/0:8,0:7:14.94:0,15,213	./.	0/1:9,0:5:25.44:31,0,25	1/1:19,0:19:15.05:325,15,0	1/1:9,7:18:21.07:543,21,0	1/1:10,3:11:21.07:506,21,0	1/1:15,0:13:23.50:381,23,0	1/1:10,1:10:13.86:299,14,0	1/1:17,2:13:17.98:257,18,0	1/1:17,2:19:27.09:589,27,0	1/1:16,4:18:37.87:771,38,0	0/0:9,0:7:4.87:0,5,104	1/1:12,5:17:17.57:305,18,0	1/1:12,4:15:15.02:351,15,0	1/1:8,4:13:18.01:392,18,0	1/1:20,7:23:40.49:933,40,0	0/1:8,2:9:43.61:80,0,44	1/1:7,0:11:20.94:238,21,0	1/1:14,2:18:19.52:274,20,0	1/1:5,0:4:3.01:57,3,0	0/0:14,0:13:26.92:0,27,475	0/0:13,0:12:30.05:0,30,466	0/0:22,0:21:17.45:0,17,364	1/1:5,3:10:15.05:348,15,0	1/1:15,5:19:26.97:663,27,0	1/1:12,2:14:12.04:284,12,0	1/1:2,2:6:3.01:88,3,0
chr10	63735341	.	T	TTTTTTTC	4090.44	PASS	AB=1.000;AC=27;AF=0.500;AN=54;BaseQRankSum=5.728;DP=342;FS=11.954;HRun=0;HaplotypeScore=93.2658;InbreedingCoeff=-0.0591;MQ=39.89;MQ0=29;MQRankSum=-6.816;QD=17.26;ReadPosRankSum=1.932;VQSLOD=1.6197;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:34:66.11:0,66,1548	0/0:8,0:8:23.99:0,24,362	./.	0/1:4,0:2:30.84:31,0,38	1/1:4,9:15:15.05:428,15,0	1/1:15,0:14:0.37:262,0,0	1/1:10,0:9:4.18:250,4,0	1/1:5,0:16:38.98:683,39,0	1/1:5,0:5:12.02:137,12,0	0/1:16,0:11:37.60:38,0,89	1/1:11,0:10:1.52:241,2,0	0/1:21,0:19:79.60:234,0,80	0/0:7,0:5:8.19:0,8,173	1/1:8,0:7:9.03:145,9,0	0/1:10,0:8:34.23:131,0,34	0/1:11,0:10:33.69:172,0,34	0/1:24,0:20:41.72:403,0,42	0/1:4,0:3:67.35:67,0,68	0/1:10,0:9:25.23:53,0,25	0/1:12,0:10:22.18:151,0,22	0/0:5,0:4:8.96:0,9,70	0/0:14,0:13:32.94:0,33,720	0/0:16,0:15:39.06:0,39,728	0/0:19,0:18:23.69:0,24,540	0/1:9,0:8:5.66:175,0,6	0/1:15,0:14:17.27:327,0,17	0/1:13,0:10:28.54:119,0,29	0/1:5,0:5:9.92:43,0,10
chr10	63735880	.	CTTTT	C	7556.81	PASS	AB=0.633;AC=39;AF=0.696;AN=56;BaseQRankSum=2.783;DP=428;FS=18.023;HRun=16;HaplotypeScore=71.2498;InbreedingCoeff=0.8545;MQ=65.02;MQ0=7;MQRankSum=-1.858;QD=22.63;ReadPosRankSum=5.375;VQSLOD=2.0862;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:29:69.71:0,70,1431	0/0:1,0:2:6.02:0,6,74	0/0:15,0:7:11.62:0,12,141	0/0:15,0:7:14.87:0,15,192	1/1:2,13:16:32.99:418,33,0	1/1:5,16:22:46.26:595,46,0	1/1:1,8:8:21.02:276,21,0	1/1:9,21:25:47.85:586,48,0	1/1:6,6:11:17.90:233,18,0	1/1:5,14:20:43.12:522,43,0	1/1:7,21:26:56.97:741,57,0	1/1:4,7:11:24.03:308,24,0	0/0:9,0:10:12.04:0,12,223	1/1:2,9:11:21.03:276,21,0	1/1:2,11:13:27.03:355,27,0	1/1:6,10:14:23.88:315,24,0	1/1:9,21:28:50.84:670,51,0	1/1:5,5:9:14.95:197,15,0	0/1:8,10:17:23.46:361,0,23	1/1:8,7:14:14.81:197,15,0	1/1:4,3:7:8.87:118,9,0	0/0:6,0:7:18.06:0,18,325	0/0:7,0:8:24.08:0,24,502	0/0:5,0:5:12:0,12,223	1/1:7,14:21:41.77:536,42,0	1/1:2,10:12:30.02:378,30,0	1/1:9,12:20:23.84:315,24,0	1/1:2,7:9:12.02:158,12,0
chr10	63736262	.	A	ATT	7741.52	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-0.729;DP=459;FS=3.425;HRun=12;HaplotypeScore=78.9703;InbreedingCoeff=0.8874;MQ=62.73;MQ0=3;MQRankSum=-3.031;QD=21.93;ReadPosRankSum=-0.352;VQSLOD=4.4944;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:35.80:0,36,331	0/0:2,0:2:2.98:0,3,26	0/0:12,0:6:8.56:0,9,63	0/0:17,0:11:10:0,10,58	1/1:9,1:19:23.86:206,24,0	1/1:7,13:20:31.13:391,31,0	1/1:0,11:11:24.08:336,24,0	1/1:17,8:25:51.10:597,51,0	1/1:8,4:13:20.78:270,21,0	1/1:7,17:21:42.07:542,42,0	1/1:8,11:17:41.54:482,42,0	1/1:8,4:14:29.79:268,30,0	0/0:17,0:17:17.43:0,17,311	1/1:9,4:13:30.03:365,30,0	1/1:4,14:18:44.93:574,45,0	1/1:5,8:15:7.28:381,7,0	1/1:1,12:13:27.09:378,27,0	1/1:4,0:5:8.24:78,8,0	1/1:6,13:21:42.08:527,42,0	1/1:5,17:18:47.63:611,48,0	1/1:4,6:10:6.02:84,6,0	0/0:7,0:7:11.99:0,12,111	0/0:21,0:22:9.12:0,9,347	0/0:8,0:8:16.74:0,17,133	1/1:5,18:20:27.70:342,28,0	1/1:5,23:27:57.71:661,58,0	1/1:5,15:19:27.05:357,27,0	1/1:3,7:10:21.07:291,21,0
chr10	63736321	.	T	TATG	15001.84	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-2.480;DP=404;FS=0.000;HRun=0;HaplotypeScore=84.2823;InbreedingCoeff=0.9570;MQ=58.53;MQ0=4;MQRankSum=-6.876;QD=51.03;ReadPosRankSum=3.938;VQSLOD=6.8382;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:18.06:0,18,286	0/0:5,0:5:15.01:0,15,236	0/0:19,0:10:17.96:0,18,272	0/0:19,0:9:17.95:0,18,196	1/1:6,11:14:39.12:814,39,0	1/1:5,10:17:42.13:876,42,0	1/1:4,10:14:27.09:589,27,0	1/1:10,16:26:54.19:1216,54,0	1/1:1,13:14:39.13:858,39,0	1/1:8,9:15:33.11:742,33,0	1/1:6,16:21:57.19:1184,57,0	1/1:1,13:14:39.13:896,39,0	0/0:14,0:14:41.50:0,42,665	1/1:1,11:13:33.11:734,33,0	1/1:1,8:10:27.09:595,27,0	1/1:3,9:14:36.12:796,36,0	1/1:2,11:12:36.12:795,36,0	1/1:3,3:6:15.05:345,15,0	1/1:8,8:16:26.99:596,27,0	1/1:6,22:21:60.21:1367,60,0	1/1:0,1:1:3.01:69,3,0	0/0:10,0:10:30.10:0,30,512	0/0:20,0:18:54.18:0,54,913	0/0:8,0:8:21.07:0,21,354	1/1:6,9:12:30.10:655,30,0	1/1:4,14:18:48.16:1066,48,0	1/1:1,6:8:21.07:477,21,0	1/1:1,4:5:15.05:331,15,0
chr10	63736323	.	T	TG	3562.94	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=6.803;DP=386;FS=0.000;HRun=0;HaplotypeScore=109.5766;InbreedingCoeff=0.9201;MQ=57.90;MQ0=4;MQRankSum=-5.980;QD=12.91;ReadPosRankSum=3.481;VQSLOD=4.3465;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:17.27:0,17,205	0/0:5,0:5:15.05:0,15,209	0/0:19,0:9:17.94:0,18,224	0/0:19,0:9:17.63:0,18,215	1/1:13,1:13:21.40:201,21,0	1/1:16,0:16:35.66:203,36,0	1/1:12,0:13:25.58:197,26,0	1/1:24,0:24:31.64:222,32,0	1/1:14,1:14:36.57:217,37,0	1/1:14,0:13:24.26:142,24,0	1/1:22,0:20:13.20:234,13,0	1/1:14,0:14:35.75:178,36,0	0/0:14,0:14:42.13:0,42,566	1/1:12,0:12:30.01:140,30,0	1/1:12,0:12:25.79:178,26,0	1/1:12,0:12:31.33:223,31,0	1/1:14,0:13:8.88:180,9,0	1/1:4,0:4:8.53:57,9,0	1/1:14,0:14:6.94:131,7,0	1/1:25,2:20:55.32:322,55,0	1/1:1,0:1:2.68:11,3,0	0/0:10,0:10:30.10:0,30,420	0/0:20,0:18:54.18:0,54,752	0/0:9,0:9:24.08:0,24,319	1/1:13,1:11:28.48:189,28,0	1/1:18,1:19:45.82:322,46,0	1/1:7,0:7:19.49:107,19,0	1/1:5,1:6:14.18:107,14,0
chr10	63736810	.	G	GTTA	16005.82	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=11.366;DP=511;FS=1.924;HRun=0;HaplotypeScore=176.1735;InbreedingCoeff=0.9884;MQ=85.05;MQ0=0;MQRankSum=-13.557;QD=53.35;ReadPosRankSum=4.098;VQSLOD=6.0993;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,102,1864	0/0:8,0:8:24.07:0,24,412	0/0:26,0:26:62.35:0,62,987	0/0:23,0:23:48.62:0,49,769	0/0:14,0:14:35.81:0,36,300	1/1:11,20:32:96.32:1812,96,0	1/1:6,7:13:39.13:678,39,0	0/0:35,0:35:99:0,105,1364	1/1:9,13:22:66.19:1174,66,0	1/1:6,14:20:60.20:1177,60,0	1/1:5,8:13:38.91:663,39,0	1/1:8,9:17:45.05:881,45,0	0/0:17,0:17:51.17:0,51,946	1/1:5,9:14:42.13:809,42,0	1/1:10,16:26:77.62:1397,78,0	1/1:4,5:9:27.09:481,27,0	1/1:4,7:11:30.10:560,30,0	1/1:1,2:3:9.03:169,9,0	1/1:10,8:18:51.16:900,51,0	1/1:8,16:24:69.23:1313,69,0	1/1:7,3:10:18.06:300,18,0	0/0:24,0:24:69.24:0,69,1222	0/0:21,0:21:60.18:0,60,1034	0/0:7,0:7:21.07:0,21,392	1/1:5,13:18:51.17:967,51,0	1/1:7,11:18:50.53:930,51,0	1/1:11,14:25:75.25:1374,75,0	1/1:1,6:7:21.07:421,21,0
chr10	63736815	.	A	ACGTTG	19182.06	PASS	AB=0.706;AC=30;AF=0.536;AN=56;BaseQRankSum=19.026;DP=586;FS=2.639;HRun=0;HaplotypeScore=262.4037;InbreedingCoeff=0.3014;MQ=74.71;MQ0=0;MQRankSum=-15.515;QD=44.61;ReadPosRankSum=9.443;VQSLOD=3.9285;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:96.31:0,96,2167	0/0:8,0:8:24.06:0,24,470	0/0:21,0:21:60.10:0,60,1189	0/0:19,0:19:48.15:0,48,939	1/1:12,0:12:7.13:376,7,0	0/1:17,20:37:30.77:1891,0,31	1/1:8,6:15:45.15:976,45,0	0/1:30,0:30:99:632,0,233	1/1:10,12:23:46.90:1295,47,0	1/1:16,14:30:57.84:1728,58,0	0/1:12,8:20:21.43:766,0,21	0/1:17,9:26:99:835,0,108	0/0:18,0:18:54.16:0,54,1171	1/1:8,9:17:16.95:736,17,0	1/1:21,16:37:16.86:1403,17,0	1/1:10,5:15:16.23:647,16,0	0/1:6,7:13:3.42:528,0,3	0/1:1,2:3:11.56:130,0,12	0/1:14,8:22:46.59:874,0,47	0/1:11,16:27:10.74:1286,0,11	1/1:10,3:13:16.91:459,17,0	0/0:25,0:25:75.25:0,75,1700	0/0:23,0:23:69.24:0,69,1569	0/0:8,0:8:21.07:0,21,489	1/1:17,13:30:30.06:1561,30,0	0/1:13,11:24:10.45:1224,0,10	0/1:13,14:27:34.65:1242,0,35	1/1:3,6:9:27.09:594,27,0
chr10	63736816	.	A	AGAT	13462.20	PASS	AB=0.650;AC=39;AF=0.696;AN=56;BaseQRankSum=16.036;DP=613;FS=6.542;HRun=0;HaplotypeScore=280.1981;InbreedingCoeff=0.9111;MQ=72.98;MQ0=0;MQRankSum=-14.215;QD=29.46;ReadPosRankSum=2.314;VQSLOD=4.2536;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:90.31:0,90,1484	0/0:8,0:8:21.06:0,21,326	0/0:20,0:20:43.33:0,43,657	0/0:19,0:19:36.41:0,36,470	1/1:4,0:15:27.25:293,27,0	1/1:17,20:37:98.37:1230,98,0	1/1:9,6:16:45.05:566,45,0	1/1:12,1:50:96.25:1443,96,0	1/1:10,12:23:61.35:806,61,0	1/1:16,14:30:79.35:1051,79,0	1/1:12,8:20:47.53:552,48,0	1/1:15,9:24:65.77:691,66,0	0/0:18,0:18:51.16:0,51,820	1/1:9,8:17:39.50:468,39,0	1/1:22,16:38:80.81:1000,81,0	1/1:10,5:15:18.94:379,19,0	0/1:6,7:13:6.27:276,0,6	1/1:1,2:3:6.02:84,6,0	1/1:15,8:23:51.43:598,51,0	1/1:12,16:28:62.45:856,62,0	1/1:11,3:14:21.61:312,22,0	0/0:24,0:24:72.23:0,72,1140	0/0:25,0:25:69.19:0,69,1048	0/0:8,0:8:24.04:0,24,369	1/1:17,12:30:77.82:975,78,0	1/1:14,11:25:55.37:774,55,0	1/1:13,14:27:59.30:809,59,0	1/1:3,6:9:19.57:298,20,0
chr10	63737722	.	GTT	G	918.63	PASS	AB=0.981;AC=16;AF=0.286;AN=56;BaseQRankSum=7.699;DP=546;FS=33.186;HRun=13;HaplotypeScore=127.3482;InbreedingCoeff=-0.0074;MQ=68.91;MQ0=7;MQRankSum=-4.983;QD=3.11;ReadPosRankSum=2.417;VQSLOD=-0.6601;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:24.02:0,24,302	0/0:6,0:7:17.54:0,18,208	0/0:41,0:12:13.64:0,14,106	0/0:48,0:18:14.79:0,15,116	1/1:4,20:27:43.97:492,44,0	0/1:20,0:21:28.37:31,0,28	0/1:18,0:18:2.57:3,0,40	1/1:8,21:28:23.89:401,24,0	0/0:12,0:13:9.29:0,9,187	0/0:19,0:20:9.27:0,9,196	0/1:20,0:20:9.96:10,0,163	0/0:17,0:18:15.67:0,16,233	0/0:12,0:13:30.09:0,30,395	0/1:9,0:9:13.51:14,0,35	0/1:19,0:19:10.22:24,0,10	0/1:10,0:11:10.34:10,0,21	0/1:14,0:14:4.91:5,0,51	0/0:13,0:13:22.05:0,22,193	0/1:15,0:18:3.14:3,0,127	0/1:26,0:27:13.44:13,0,245	0/0:9,0:9:5.14:0,5,62	0/0:11,0:13:35.60:0,36,459	0/0:15,0:18:43.42:0,43,519	0/0:5,0:6:17.55:0,18,225	0/1:16,0:18:33.57:36,0,34	0/1:25,0:25:8.71:9,0,237	0/1:38,0:37:28.39:28,0,313	0/0:19,0:18:10.32:0,10,137
chr10	63737730	.	TTTTTTGTTTTG	T	7021.41	PASS	AB=0.978;AC=25;AF=0.446;AN=56;BaseQRankSum=10.286;DP=541;FS=19.801;HRun=0;HaplotypeScore=178.0017;InbreedingCoeff=0.0684;MQ=65.71;MQ0=8;MQRankSum=-7.696;QD=21.28;ReadPosRankSum=5.132;VQSLOD=2.4119;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:27.03:0,27,1020	0/1:7,0:7:0.84:1,0,786	0/0:43,0:12:15.22:0,15,187	0/0:49,0:17:27.30:0,27,194	0/0:27,0:27:64.04:0,64,2169	1/1:20,0:20:5.70:416,6,0	0/1:17,1:18:20.29:181,0,20	0/0:30,0:29:17.31:0,17,1119	0/1:10,0:11:34.51:262,0,35	0/1:19,0:19:50.66:367,0,51	1/1:22,0:22:29.43:849,29,0	0/1:15,0:15:51.52:240,0,52	0/0:13,0:13:36.12:0,36,1160	0/1:7,1:8:14.06:243,0,14	1/1:19,1:20:17.87:367,18,0	1/1:10,0:10:11.86:180,12,0	0/1:15,0:13:33.93:153,0,34	0/1:13,1:13:22.49:316,0,22	0/1:19,0:19:3.64:480,0,4	0/1:27,0:26:72.50:636,0,72	1/1:9,0:8:3.75:107,4,0	0/0:13,0:13:36.10:0,36,1083	0/0:18,0:18:46:0,46,1538	0/0:8,0:8:24.01:0,24,830	0/1:18,1:19:19.44:420,0,19	1/1:22,0:22:21.77:720,22,0	0/1:39,0:38:21.78:968,0,22	0/1:16,0:15:71.98:115,0,72
chr10	63737731	.	TTTTTGTTTTG	T	11050.10	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=4.886;DP=537;FS=2.183;HRun=0;HaplotypeScore=156.4586;InbreedingCoeff=0.8980;MQ=65.75;MQ0=8;MQRankSum=-8.339;QD=34.75;ReadPosRankSum=2.016;VQSLOD=4.8529;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:21.07:0,21,855	0/0:7,0:7:18.06:0,18,754	0/0:43,0:13:11.94:0,12,185	0/0:50,0:18:0.83:0,1,52	0/0:26,0:26:66.23:0,66,2022	1/1:3,17:20:24.05:643,24,0	1/1:5,11:16:8.78:231,9,0	0/0:30,0:29:31.50:0,32,1125	1/1:9,2:11:26.66:476,27,0	1/1:8,11:19:33.09:658,33,0	1/1:11,11:22:57.17:1293,57,0	1/1:13,2:15:23.90:453,24,0	0/0:13,0:13:36.04:0,36,1004	1/1:2,6:8:12.04:324,12,0	1/1:3,17:20:17.65:470,18,0	1/1:4,6:10:8.99:231,9,0	1/1:5,9:12:8.88:255,9,0	1/1:13,1:13:19.31:363,19,0	1/1:8,11:19:41.66:765,42,0	1/1:10,16:25:51.09:1099,51,0	1/1:8,0:7:9.02:196,9,0	0/0:13,0:13:21.07:0,21,853	0/0:18,0:18:30.10:0,30,1254	0/0:8,0:8:24.08:0,24,735	1/1:7,12:19:18.03:482,18,0	1/1:15,7:22:51.16:1134,51,0	1/1:32,7:38:92.72:1840,93,0	1/1:7,9:15:6.02:137,6,0
chr10	63737732	.	TTTTGTTTTG	T	9121.70	PASS	AB=0.995;AC=30;AF=0.536;AN=56;BaseQRankSum=9.378;DP=535;FS=1.850;HRun=0;HaplotypeScore=153.5043;InbreedingCoeff=0.4499;MQ=64.72;MQ0=8;MQRankSum=-7.461;QD=25.41;ReadPosRankSum=4.235;VQSLOD=4.0970;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:21.59:0,22,840	0/0:7,0:7:20.10:0,20,704	0/1:44,0:13:5.06:5,0,232	0/0:51,0:18:23.92:0,24,162	0/0:26,0:26:51.97:0,52,1779	1/1:20,0:20:27.08:551,27,0	0/1:16,0:16:5.92:191,0,6	0/0:30,0:29:27.77:0,28,1109	0/1:12,0:12:6.08:370,0,6	1/1:19,0:19:12.72:496,13,0	1/1:21,2:23:42.85:1090,43,0	0/1:13,0:13:13.39:342,0,13	0/0:13,0:13:34.08:0,34,939	0/1:8,0:8:5.46:241,0,5	1/1:20,0:20:18.01:410,18,0	1/1:9,1:10:5.15:212,5,0	0/1:14,0:12:8.59:182,0,9	1/1:14,0:13:10.83:283,11,0	1/1:17,1:18:24.71:680,25,0	0/1:25,1:25:34.50:843,0,35	1/1:8,1:8:11.54:188,12,0	0/0:13,0:13:35.95:0,36,941	0/0:18,0:18:41.24:0,41,1257	0/0:8,0:8:24.08:0,24,726	1/1:19,0:19:5.58:412,6,0	1/1:19,3:22:33.07:949,33,0	1/1:36,2:37:69.67:1579,70,0	0/1:14,0:13:46.59:96,0,47
chr10	63737735	.	TG	T	1549.77	PASS	AB=0.971;AC=22;AF=0.393;AN=56;BaseQRankSum=10.303;DP=528;FS=6.569;HRun=1;HaplotypeScore=115.3585;InbreedingCoeff=-0.2266;MQ=61.06;MQ0=9;MQRankSum=-8.320;QD=4.60;ReadPosRankSum=2.976;VQSLOD=0.5951;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:25.88:0,26,238	0/0:9,0:9:24.91:0,25,243	0/0:44,1:13:16.39:0,16,164	0/0:49,0:16:0.01:0,0,93	0/0:26,0:26:39.04:0,39,218	1/1:20,0:20:21.95:97,22,0	0/1:14,1:15:19.76:51,0,20	0/1:31,0:30:36.28:36,0,206	0/1:11,1:12:73.18:73,0,83	0/1:16,0:16:32.70:97,0,33	0/1:25,1:26:51.13:237,0,51	0/1:13,0:13:48.02:83,0,48	0/0:13,0:13:22.13:0,22,189	0/1:8,0:8:13.96:23,0,14	1/1:18,1:19:16.25:68,16,0	1/1:8,1:9:7.07:37,7,0	0/1:12,1:11:22.55:37,0,23	0/1:13,0:13:20.75:81,0,21	0/1:18,0:18:39.24:82,0,39	0/1:25,0:24:99:109,0,119	0/1:10,0:9:16.60:64,0,17	0/0:13,0:13:33.71:0,34,330	0/0:17,0:17:39.69:0,40,408	0/0:9,0:9:24.06:0,24,182	0/1:17,1:18:9.19:55,0,9	0/1:19,0:19:72.96:119,0,73	0/1:33,4:36:41.48:353,0,41	0/1:14,0:13:16.39:16,0,59
chr10	63737740	.	TG	T	1394.71	PASS	AB=0.986;AC=21;AF=0.375;AN=56;BaseQRankSum=10.070;DP=499;FS=5.829;HRun=1;HaplotypeScore=110.5571;InbreedingCoeff=-0.1130;MQ=53.10;MQ0=9;MQRankSum=-7.579;QD=4.76;ReadPosRankSum=2.854;VQSLOD=0.6667;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:9,1:10:5.28:0,5,322	0/0:9,0:9:26.66:0,27,340	0/0:36,1:11:27.02:0,27,342	0/0:43,0:12:5.28:0,5,75	0/0:24,0:24:69.21:0,69,959	1/1:19,0:19:14.35:61,14,0	0/1:13,1:14:3.75:24,0,4	0/0:29,0:28:20.44:0,20,768	0/1:14,0:14:49.42:130,0,49	0/1:13,0:13:15.71:126,0,16	0/1:25,2:27:33.39:233,0,33	0/1:13,0:13:67.70:77,0,68	0/0:16,0:16:33.27:0,33,406	1/1:7,0:7:4.51:24,5,0	1/1:19,0:19:14.72:52,15,0	0/1:9,0:9:13.15:18,0,13	0/1:13,0:11:10.93:25,0,11	0/1:12,0:11:41.13:41,0,81	0/1:15,0:15:13.77:84,0,14	0/1:21,0:20:18.45:102,0,18	0/1:11,0:9:5.66:61,0,6	0/0:11,0:11:29.65:0,30,359	0/0:18,0:18:50.81:0,51,650	0/0:9,0:9:27.08:0,27,359	0/1:17,0:17:7.25:37,0,7	0/1:19,0:19:26.80:117,0,27	0/1:35,3:37:32.59:334,0,33	0/1:12,0:11:14.93:19,0,15
chr10	63737743	.	TTTG	T	2446.53	PASS	AB=0.966;AC=23;AF=0.411;AN=56;BaseQRankSum=11.813;DP=509;FS=4.230;HRun=0;HaplotypeScore=122.5300;InbreedingCoeff=-0.0041;MQ=54.36;MQ0=9;MQRankSum=-9.653;QD=8.35;ReadPosRankSum=6.208;VQSLOD=2.3333;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:26.66:0,27,529	0/0:9,0:9:24.08:0,24,523	0/0:39,0:12:28.03:0,28,445	0/0:43,0:13:0.01:0,0,111	0/0:26,0:26:75.25:0,75,1527	1/1:18,0:18:23.59:154,24,0	0/1:16,0:16:26.33:26,0,64	0/0:29,0:29:47.84:0,48,1146	0/1:13,0:13:58.74:179,0,59	0/1:15,0:15:99:103,0,153	0/1:25,0:26:99:152,0,129	0/1:10,1:11:14.14:129,0,14	0/0:17,0:17:51.05:0,51,828	1/1:7,0:7:10.52:53,11,0	1/1:19,0:19:15.29:84,15,0	1/1:8,0:8:8.63:52,9,0	1/1:12,0:10:8.23:53,8,0	0/1:12,1:12:88.12:88,0,124	0/1:13,3:16:23.14:364,0,23	0/1:19,1:19:39.57:264,0,40	0/1:11,0:9:30.17:77,0,30	0/0:12,0:12:27.09:0,27,534	0/0:19,0:19:51.15:0,51,968	0/0:10,0:10:30.10:0,30,579	0/1:18,0:18:53.66:87,0,54	0/1:19,1:20:99:197,0,149	0/1:38,0:37:93.91:559,0,94	0/1:12,0:11:5.26:5,0,34
chr10	63738483	.	C	CA	7973.55	PASS	AB=0.596;AC=34;AF=0.607;AN=56;BaseQRankSum=-10.694;DP=588;FS=8.611;HRun=9;HaplotypeScore=58.1683;InbreedingCoeff=0.8269;MQ=64.56;MQ0=11;MQRankSum=-0.834;QD=22.46;ReadPosRankSum=2.629;VQSLOD=5.6298;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:31:79.74:0,80,662	0/0:10,0:10:23.53:0,24,199	0/0:29,0:8:1.86:0,2,22	0/0:19,1:7:11.65:0,12,83	0/0:30,0:30:80.96:0,81,699	1/1:1,18:19:28.10:538,28,0	1/1:5,13:18:16.06:404,16,0	0/0:23,0:23:47.94:0,48,414	1/1:2,18:20:45.12:497,45,0	1/1:2,14:16:19.05:428,19,0	1/1:5,10:16:26.91:280,27,0	1/1:3,12:15:33.09:365,33,0	0/0:16,0:16:41.97:0,42,361	1/1:0,14:14:39.11:431,39,0	1/1:3,24:27:60.16:664,60,0	1/1:5,24:28:25.20:653,25,0	1/1:5,25:33:82.94:846,83,0	1/1:4,12:16:27.07:299,27,0	0/1:10,12:21:27.22:381,0,27	0/1:4,17:21:3.98:415,0,4	1/1:3,9:12:21.06:232,21,0	0/0:23,0:23:59.97:0,60,517	0/0:27,0:27:63.73:0,64,591	0/0:22,1:23:35.81:0,36,539	1/1:1,16:17:29.91:313,30,0	1/1:8,15:22:45.12:498,45,0	1/1:7,21:29:54.09:597,54,0	1/1:0,6:6:12.03:133,12,0
chr10	63738791	.	GCTT	G	739.88	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.829;DP=526;FS=6.133;HRun=0;HaplotypeScore=73.7478;InbreedingCoeff=0.9566;MQ=80.82;MQ0=0;MQRankSum=-2.550;QD=33.63;ReadPosRankSum=1.773;VQSLOD=3.5000;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,15:17:42.10:669,42,0	1/1:0,5:5:12.04:187,12,0	0/0:14,0:14:39.13:0,39,760	0/0:14,0:14:9.62:0,10,333	0/0:17,0:17:48.15:0,48,1014	0/0:23,0:23:54.16:0,54,1164	0/0:13,0:13:39.13:0,39,872	0/0:33,0:33:78.24:0,78,1591	0/0:21,0:21:60.21:0,60,1295	0/0:16,0:16:48.16:0,48,1066	0/0:20,0:20:60.17:0,60,1229	0/0:22,0:22:60.15:0,60,1296	0/0:19,0:19:51.16:0,51,1088	0/0:25,0:25:69.24:0,69,1547	0/0:23,0:23:63.22:0,63,1392	0/0:24,0:24:66.20:0,66,1396	0/0:21,0:21:63.22:0,63,1413	0/0:10,0:10:30.10:0,30,649	0/0:30,0:30:87.29:0,87,1891	0/0:10,0:10:24.06:0,24,494	0/0:17,0:17:51.17:0,51,1122	0/0:15,0:15:39.12:0,39,810	0/0:21,0:21:60.19:0,60,1304	0/0:12,0:12:36.11:0,36,741	0/0:14,0:14:42.13:0,42,878	0/0:25,0:25:69.24:0,69,1540	0/0:25,0:25:75.20:0,75,1567	0/0:20,0:20:60.21:0,60,1336
chr10	63739467	.	TTTATTTA	T	11220.52	PASS	AB=0.529;AC=39;AF=0.696;AN=56;BaseQRankSum=5.962;DP=284;FS=1.793;HRun=0;HaplotypeScore=62.5161;InbreedingCoeff=0.6570;MQ=47.86;MQ0=6;MQRankSum=-3.452;QD=44.00;ReadPosRankSum=1.534;VQSLOD=4.6320;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:36.12:0,36,1259	0/0:1,0:1:3.01:0,3,121	0/0:5,0:3:9.03:0,9,135	0/0:2,0:1:2.98:0,3,21	1/1:0,11:11:27.09:591,27,0	1/1:1,16:17:15.05:378,15,0	1/1:1,3:4:6.02:120,6,0	0/1:4,33:37:19.42:1769,0,19	1/1:0,8:8:15.05:395,15,0	1/1:0,14:14:39.01:722,39,0	1/1:1,7:8:18.06:401,18,0	1/1:0,10:10:24.08:595,24,0	0/0:3,0:3:6.02:0,6,242	1/1:0,10:10:12.04:279,12,0	1/1:0,4:4:6.02:158,6,0	1/1:0,10:10:18.06:437,18,0	1/1:1,16:17:18.06:474,18,0	1/1:2,11:13:18.06:414,18,0	1/1:5,18:19:54.15:1023,54,0	1/1:0,7:7:9.03:194,9,0	1/1:0,4:4:6.02:122,6,0	0/0:1,0:1:3:0,3,25	0/0:2,0:2:3.01:0,3,36	0/0:1,0:1:3.01:0,3,36	1/1:0,11:11:18.06:399,18,0	1/1:0,23:23:66.20:1491,66,0	1/1:0,16:16:39.13:917,39,0	1/1:1,7:8:15.05:341,15,0
chr10	63742424	.	TC	T	15890.73	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-0.969;DP=643;FS=0.000;HRun=3;HaplotypeScore=72.1410;InbreedingCoeff=0.9995;MQ=70.22;MQ0=0;MQRankSum=-5.157;QD=33.52;ReadPosRankSum=4.204;VQSLOD=5.2863;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,111,1597	0/0:11,0:11:33.11:0,33,475	0/0:21,0:21:57.19:0,57,797	0/0:28,0:28:72.23:0,72,984	1/1:1,24:25:66.21:818,66,0	1/1:0,25:25:66.21:818,66,0	1/1:2,34:36:99:1227,99,0	1/1:1,22:23:66.21:818,66,0	1/1:1,26:27:72.23:892,72,0	1/1:0,26:26:78.25:967,78,0	1/1:0,22:22:66.21:818,66,0	1/1:0,25:25:57.18:706,57,0	0/0:17,0:17:51.17:0,51,720	1/1:0,18:18:45.14:557,45,0	1/1:1,20:21:54.17:669,54,0	1/1:0,24:24:69.22:855,69,0	1/1:2,20:22:57.18:707,57,0	1/1:0,22:22:66.21:818,66,0	1/1:1,21:21:57.16:693,57,0	1/1:1,22:23:57.18:707,57,0	1/1:0,42:42:99:1562,126,0	0/0:12,0:12:30.10:0,30,431	0/0:20,0:20:54.10:0,54,730	0/0:21,0:21:60.16:0,60,841	1/1:0,20:20:54.17:670,54,0	1/1:1,16:17:39.11:472,39,0	1/1:1,24:24:66.21:818,66,0	1/1:0,9:9:24.08:298,24,0
chr10	63742819	.	A	ATT	8130.73	PASS	AB=1.000;AC=41;AF=0.732;AN=56;BaseQRankSum=-6.638;DP=357;FS=10.087;HRun=9;HaplotypeScore=46.3792;InbreedingCoeff=0.8129;MQ=66.17;MQ0=3;MQRankSum=0.912;QD=28.53;ReadPosRankSum=1.124;VQSLOD=3.5640;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:69.01:0,69,709	0/0:7,0:7:18.04:0,18,192	0/1:12,0:8:14.50:15,0,80	0/0:12,0:12:10.12:0,10,188	1/1:4,0:8:15.52:83,16,0	1/1:1,9:10:18.06:277,18,0	1/1:3,12:16:33.11:508,33,0	1/1:2,0:11:23.15:97,23,0	1/1:2,9:11:27.09:416,27,0	1/1:3,17:20:45.15:693,45,0	1/1:2,14:16:42.14:645,42,0	1/1:0,8:8:18.06:277,18,0	0/0:11,0:11:14.83:0,15,272	1/1:2,17:15:33.11:508,33,0	1/1:3,6:10:14.64:226,15,0	1/1:2,11:13:24.08:370,24,0	1/1:2,23:26:57.19:877,57,0	1/1:2,13:17:37.89:527,38,0	1/1:8,9:15:27.09:413,27,0	1/1:3,11:15:27.49:529,27,0	1/1:2,5:6:12.04:185,12,0	0/0:2,0:2:3:0,3,32	0/0:4,0:4:12.03:0,12,128	0/0:9,0:9:12.03:0,12,126	1/1:2,5:7:9.03:139,9,0	1/1:1,18:20:53.67:788,54,0	1/1:4,14:17:36.09:528,36,0	1/1:3,0:3:5.49:31,5,0
chr10	63742832	.	GATTT	G	178.46	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=2.999;DP=348;FS=2.635;HRun=0;HaplotypeScore=83.5640;InbreedingCoeff=0.4506;MQ=60.22;MQ0=3;MQRankSum=-3.053;QD=4.46;ReadPosRankSum=-1.778;VQSLOD=1.8082;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:69.23:0,69,1613	0/0:7,0:7:15.05:0,15,373	0/1:11,0:5:13.71:14,0,59	0/1:10,0:8:5.09:5,0,181	1/1:1,8:9:15.05:211,15,0	0/0:11,0:11:27.09:0,27,607	0/0:17,0:17:36.11:0,36,820	0/1:8,0:8:19.72:20,0,23	0/0:9,0:9:21.07:0,21,459	0/0:21,0:21:40.38:0,40,936	0/0:15,0:15:42.14:0,42,999	0/0:8,0:8:21.07:0,21,445	0/0:14,0:14:30.10:0,30,684	0/0:18,0:15:33.10:0,33,662	0/0:10,0:10:21.07:0,21,522	0/0:14,0:14:27.09:0,27,655	0/0:24,0:24:45.15:0,45,1116	0/0:21,0:20:21.88:0,22,826	0/0:12,0:11:18.06:0,18,410	0/0:13,0:13:30.09:0,30,673	0/0:8,0:8:18.06:0,18,419	0/0:3,0:3:9.03:0,9,217	0/0:7,0:7:18.06:0,18,448	0/0:5,0:5:9.03:0,9,208	0/0:8,0:8:15.05:0,15,339	0/0:17,0:17:33.11:0,33,821	0/0:18,0:17:39.13:0,39,860	1/1:2,0:2:6.01:57,6,0
chr10	63743491	.	TTGA	T	14526.46	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=13.576;DP=579;FS=3.891;HRun=0;HaplotypeScore=86.9328;InbreedingCoeff=0.9944;MQ=86.71;MQ0=0;MQRankSum=-5.810;QD=40.58;ReadPosRankSum=3.617;VQSLOD=6.0935;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:96.33:0,96,2144	0/0:6,0:6:15.05:0,15,335	0/0:15,0:15:38.99:0,39,744	0/0:29,0:29:42.59:0,43,1352	0/0:33,0:33:93.32:0,93,2075	1/1:0,23:23:66.23:1078,66,0	1/1:1,20:21:54.18:882,54,0	0/0:47,0:47:99:0,129,2762	1/1:1,21:22:51.17:832,51,0	1/1:2,14:16:42.14:685,42,0	1/1:4,21:25:60.08:894,60,0	1/1:1,23:24:54.18:882,54,0	0/0:13,0:13:39.13:0,39,871	1/1:1,19:20:57.15:900,57,0	1/1:2,23:25:60.20:980,60,0	1/1:1,17:18:51.17:833,51,0	1/1:1,34:35:84.29:1372,84,0	1/1:0,13:12:27.09:441,27,0	1/1:3,19:22:57.17:882,57,0	1/1:2,13:15:33.11:539,33,0	1/1:0,14:14:36.08:547,36,0	0/0:8,0:8:21.07:0,21,460	0/0:18,0:18:45.15:0,45,986	0/0:19,0:19:57.20:0,57,1274	1/1:0,15:15:39.09:608,39,0	1/1:0,19:19:57.15:851,57,0	1/1:0,22:22:66.23:1077,66,0	1/1:0,9:9:15.05:245,15,0
chr10	63744131	.	T	TG	5410.34	PASS	AB=1.000;AC=39;AF=0.696;AN=56;BaseQRankSum=7.490;DP=553;FS=3.012;HRun=9;HaplotypeScore=80.4698;InbreedingCoeff=0.9329;MQ=70.04;MQ0=7;MQRankSum=-1.795;QD=14.31;ReadPosRankSum=3.293;VQSLOD=5.2042;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:47,1:49:70.23:0,70,818	0/0:11,0:10:20.56:0,21,161	0/0:24,0:19:32.85:0,33,268	0/0:24,0:20:11.79:0,12,251	0/1:22,0:22:3.40:53,0,3	1/1:19,0:19:44.50:313,44,0	1/1:18,0:17:20.69:138,21,0	1/1:21,0:22:23.93:221,24,0	1/1:19,1:20:47.46:350,47,0	1/1:9,1:10:21.63:143,22,0	1/1:15,1:16:32.53:220,33,0	1/1:20,2:22:56.39:413,56,0	0/0:17,0:17:38.97:0,39,338	1/1:16,0:16:41.63:313,42,0	1/1:18,1:18:38.53:270,39,0	1/1:19,2:21:47.51:361,48,0	1/1:27,1:28:59.41:438,59,0	1/1:14,0:13:29.78:226,30,0	1/1:18,0:18:37.01:209,37,0	1/1:22,2:24:50.29:370,50,0	1/1:20,0:21:34.55:268,35,0	0/0:13,0:13:29.99:0,30,260	0/0:14,0:14:26.97:0,27,234	0/0:23,0:23:44.95:0,45,390	1/1:12,0:11:29.59:212,30,0	1/1:18,0:18:44.78:279,45,0	1/1:21,0:20:53.09:374,53,0	1/1:15,1:16:32.70:238,33,0
chr10	63744622	.	ACCC	A	1288.24	PASS	AB=0.984;AC=12;AF=0.214;AN=56;BaseQRankSum=0.387;DP=389;FS=8.528;HRun=12;HaplotypeScore=85.7032;InbreedingCoeff=0.4885;MQ=75.46;MQ0=7;MQRankSum=-2.072;QD=10.65;ReadPosRankSum=2.326;VQSLOD=0.3877;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:18:16.76:72,17,0	1/1:7,0:7:15.66:78,16,0	0/0:45,0:22:53.85:0,54,692	0/0:37,0:17:36.18:0,36,337	1/1:4,31:35:85.42:1072,85,0	0/0:14,0:14:13.05:0,13,68	0/1:14,0:15:4.93:5,0,99	0/0:20,0:20:3.52:0,4,160	0/1:13,0:13:3.66:4,0,23	0/0:11,0:11:15.04:0,15,239	0/0:15,0:15:23.01:0,23,321	0/0:5,0:5:5.98:0,6,47	0/0:3,0:3:6.02:0,6,104	0/1:5,0:5:17.25:17,0,47	0/0:13,0:13:6.01:0,6,44	0/0:9,0:9:14.32:0,14,99	0/0:8,0:8:12.92:0,13,126	0/0:9,0:9:8.82:0,9,61	1/1:15,1:17:28.44:198,28,0	0/0:14,0:14:14.34:0,14,176	0/0:6,0:6:2.98:0,3,23	0/0:9,0:9:20.95:0,21,288	0/0:6,0:6:6:0,6,108	0/0:10,0:10:21.06:0,21,368	0/1:11,0:11:0.66:1,0,53	0/0:9,0:9:7.97:0,8,45	0/0:14,0:14:7.14:0,7,122	0/0:10,0:10:17.89:0,18,132
chr10	63744632	.	CCCAA	C	3898.64	PASS	AB=1.000;AC=40;AF=0.714;AN=56;BaseQRankSum=3.474;DP=450;FS=57.879;HRun=0;HaplotypeScore=92.6604;InbreedingCoeff=0.5229;MQ=79.81;MQ0=10;MQRankSum=-2.696;QD=12.82;ReadPosRankSum=8.842;VQSLOD=0.5574;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,15:18:30.05:439,30,0	1/1:1,7:8:17.98:305,18,0	0/0:58,0:26:46.89:0,47,781	0/0:50,0:27:49.99:0,50,521	1/1:34,0:34:42.58:390,43,0	1/1:17,0:17:10.57:109,11,0	1/1:11,0:13:30.06:310,30,0	0/1:16,0:16:71.26:132,0,71	1/1:15,0:16:5.53:69,6,0	0/1:21,0:21:97.28:97,0,124	0/1:14,0:14:17.75:18,0,133	1/1:7,0:7:2.98:29,3,0	0/0:6,0:6:15.04:0,15,197	1/1:8,0:8:3.97:54,4,0	1/1:14,0:15:17.70:213,18,0	1/1:6,0:6:12.02:122,12,0	1/1:9,0:9:24.05:243,24,0	1/1:10,0:10:9.01:85,9,0	1/1:7,0:17:44.78:400,45,0	0/1:17,0:17:36.94:165,0,37	1/1:8,0:8:1.74:26,2,0	0/0:11,0:11:28.74:0,29,413	0/0:9,0:9:24.18:0,24,349	0/0:12,0:12:32.14:0,32,589	1/1:14,0:15:20.37:181,20,0	1/1:5,0:6:8.88:85,9,0	1/1:14,0:16:29.78:314,30,0	1/1:13,0:13:9.09:112,9,0
chr10	63744633	.	CCAAA	C	5061.88	PASS	AB=0.761;AC=41;AF=0.732;AN=56;BaseQRankSum=2.295;DP=457;FS=13.676;HRun=0;HaplotypeScore=89.4355;InbreedingCoeff=0.5852;MQ=80.44;MQ0=10;MQRankSum=-2.770;QD=16.87;ReadPosRankSum=8.765;VQSLOD=2.3540;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:18:26.66:213,27,0	1/1:8,0:8:3.93:162,4,0	0/0:59,0:26:42.90:0,43,658	0/0:51,0:28:35.67:0,36,530	1/1:35,0:35:51.74:374,52,0	1/1:0,17:17:14.86:194,15,0	1/1:3,9:12:29.83:463,30,0	0/1:9,0:16:19.38:78,0,19	1/1:1,15:16:5.53:90,6,0	0/1:6,14:20:43.17:269,0,43	0/1:14,0:14:29.88:33,0,30	1/1:0,6:6:3.01:54,3,0	0/0:9,0:9:22.32:0,22,403	1/1:7,1:8:11.60:122,12,0	1/1:3,12:15:17.65:305,18,0	1/1:0,6:6:12.04:216,12,0	1/1:0,9:9:24.08:416,24,0	1/1:0,10:10:9.03:162,9,0	1/1:17,0:17:42.53:412,43,0	1/1:2,15:17:8.75:318,9,0	1/1:0,8:8:0.66:50,1,0	0/0:13,0:13:24.39:0,24,593	0/0:12,0:12:34.66:0,35,626	0/0:13,0:13:16.65:0,17,642	1/1:3,12:15:20.63:264,21,0	1/1:2,4:6:9:142,9,0	1/1:4,11:15:29.70:489,30,0	1/1:0,12:12:14.94:233,15,0
chr10	63744634	.	CAAA	C	3440.52	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=4.709;DP=454;FS=3.779;HRun=11;HaplotypeScore=88.5608;InbreedingCoeff=0.7518;MQ=79.75;MQ0=10;MQRankSum=-2.390;QD=11.55;ReadPosRankSum=9.092;VQSLOD=-0.1268;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:18:19.16:69,19,0	1/1:8,0:8:0.70:41,1,0	0/0:57,0:24:14.75:0,15,403	0/0:49,0:28:39.30:0,39,460	1/1:33,1:34:64.82:461,65,0	1/1:17,0:17:9.01:92,9,0	1/1:12,0:12:26.96:277,27,0	1/1:13,0:16:17.05:108,17,0	1/1:16,0:16:5.76:61,6,0	1/1:20,0:20:23.97:296,24,0	1/1:7,6:13:1.72:37,2,0	1/1:6,0:6:3.01:31,3,0	0/0:9,0:9:21.05:0,21,374	1/1:8,0:8:6.01:61,6,0	1/1:13,2:15:17.97:184,18,0	1/1:6,0:6:12.03:123,12,0	1/1:9,0:9:24.05:246,24,0	1/1:10,0:10:9.02:93,9,0	1/1:17,0:17:31.99:328,32,0	1/1:16,1:17:15.60:205,16,0	1/1:8,0:8:0.65:27,1,0	0/0:14,0:14:36.04:0,36,578	0/0:12,0:12:34.66:0,35,589	0/0:13,0:13:30.09:0,30,528	1/1:15,0:15:15.01:167,15,0	1/1:5,1:6:8.99:95,9,0	1/1:13,2:15:29.61:315,30,0	1/1:12,0:12:12.02:124,12,0
chr10	63745384	.	GT	G	1536.25	PASS	AB=0.784;AC=33;AF=0.611;AN=54;BaseQRankSum=-0.335;DP=393;FS=6.815;HRun=17;HaplotypeScore=46.6959;InbreedingCoeff=0.2403;MQ=64.55;MQ0=14;MQRankSum=0.766;QD=4.40;ReadPosRankSum=3.652;VQSLOD=0.5319;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:15,0:15:2.61:3,0,84	0/0:7,0:8:14.62:0,15,99	0/1:26,0:10:1.24:1,0,45	0/1:14,0:7:0.49:0,0,2	1/1:9,12:20:16.16:156,16,0	1/1:6,8:14:22.43:123,22,0	1/1:3,2:5:5.85:33,6,0	0/1:18,1:18:22.14:22,0,39	0/1:3,3:7:12.54:31,0,13	1/1:5,12:17:8.57:133,9,0	1/1:7,8:16:23.96:118,24,0	0/0:3,4:7:2.99:0,3,24	0/0:8,0:8:5.83:0,6,38	1/1:1,2:2:2.92:17,3,0	1/1:4,6:10:10.71:56,11,0	0/1:5,6:13:21.17:29,0,21	1/1:7,21:26:40.85:223,41,0	0/1:7,7:14:18.09:53,0,18	0/1:8,7:16:8.32:79,0,8	1/1:4,16:20:10.94:159,11,0	0/0:5,0:5:0:0,0,0	./.	0/0:6,3:9:1.44:0,1,84	0/0:4,0:4:8.98:0,9,72	0/1:4,9:14:4.35:70,0,4	1/1:11,8:20:22:117,22,0	1/1:6,17:26:38.19:187,38,0	1/1:8,6:13:5.43:87,5,0
chr10	63746560	.	T	TTTTA	664.84	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-3.643;DP=454;FS=0.000;HRun=0;HaplotypeScore=83.1888;InbreedingCoeff=0.9098;MQ=90.45;MQ0=0;MQRankSum=0.470;QD=44.32;ReadPosRankSum=-2.773;VQSLOD=3.0312;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:90.31:0,90,1654	0/0:5,0:5:15.05:0,15,276	0/0:15,0:15:22.63:0,23,572	0/0:21,0:21:51.14:0,51,858	0/0:16,0:16:42.14:0,42,745	0/0:20,0:20:57.20:0,57,1047	0/0:20,0:20:51.17:0,51,923	0/0:26,0:26:57.19:0,57,1005	0/0:13,0:13:39.12:0,39,672	0/0:25,0:25:66.22:0,66,1173	0/0:14,0:14:36.12:0,36,647	0/0:18,0:18:51.12:0,51,872	0/0:14,0:14:39.13:0,39,712	0/0:13,0:13:27.09:0,27,483	0/0:19,0:19:51.12:0,51,809	0/0:13,0:13:36.09:0,36,614	0/0:19,0:19:43.79:0,44,891	0/0:3,0:3:9.03:0,9,166	1/1:3,11:15:36.09:760,36,0	0/0:15,0:15:33.10:0,33,549	0/0:27,0:27:72.25:0,72,1300	0/0:13,0:13:33.10:0,33,563	0/0:12,0:12:33.11:0,33,604	0/0:8,0:8:21.07:0,21,385	0/0:14,0:14:36.12:0,36,660	0/0:15,0:15:42.14:0,42,736	0/0:19,0:19:54.18:0,54,927	0/0:5,0:5:15.05:0,15,276
chr10	63747331	.	T	TAC	10669.18	PASS	AB=0.668;AC=33;AF=0.589;AN=56;BaseQRankSum=-13.335;DP=649;FS=3.964;HRun=0;HaplotypeScore=82.4043;InbreedingCoeff=0.6579;MQ=68.37;MQ0=4;MQRankSum=-0.700;QD=25.16;ReadPosRankSum=2.317;VQSLOD=5.8470;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:16:12:0,12,110	0/0:1,0:9:17.04:0,17,84	0/0:41,0:32:5.87:0,6,181	0/0:27,0:20:23.06:0,23,273	0/0:9,0:34:49.95:0,50,324	1/1:9,17:26:9.84:627,10,0	1/1:4,16:21:21.71:526,22,0	0/0:24,0:35:22.87:0,23,122	1/1:3,9:12:21.07:331,21,0	1/1:8,17:26:24.13:733,24,0	1/1:10,22:32:60.20:945,60,0	0/1:6,16:22:14.77:570,0,15	0/0:20,0:22:59.82:0,60,651	1/1:4,17:22:34:693,34,0	1/1:8,14:23:36.12:568,36,0	1/1:10,18:28:21.88:817,22,0	1/1:7,11:17:33.11:512,33,0	1/1:9,8:16:3.31:310,3,0	0/1:10,10:19:5.27:328,0,5	0/1:4,12:16:2.20:424,0,2	1/1:9,24:35:36.48:789,36,0	0/0:22,0:22:51.10:0,51,566	0/1:16,1:20:2.22:2,0,376	0/0:19,0:19:45.13:0,45,530	0/1:5,15:20:4.30:439,0,4	1/1:5,13:18:39.12:587,39,0	1/1:9,23:32:49.54:889,50,0	1/1:3,13:16:6.81:580,7,0
chr10	63749229	.	T	TTGAGTCCAGCCTGGA	58867.81	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-6.209;DP=568;FS=0.000;HRun=0;HaplotypeScore=163.5800;InbreedingCoeff=0.9448;MQ=74.77;MQ0=2;MQRankSum=-14.967;QD=132.59;ReadPosRankSum=1.328;VQSLOD=4.9791;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:54.16:0,54,2121	0/0:6,0:6:18.06:0,18,821	0/0:21,0:21:57.08:0,57,1793	0/0:18,0:18:45.07:0,45,1363	1/1:10,10:36:45.15:3315,45,0	1/1:9,11:25:60.21:4417,60,0	1/1:9,5:20:42.14:2530,42,0	1/1:19,2:37:99:6285,108,0	1/1:6,5:19:33.11:2456,33,0	1/1:6,8:28:75.04:3867,75,0	1/1:2,14:27:45.15:3280,45,0	1/1:5,7:19:33.11:2293,33,0	0/0:21,0:21:63.20:0,63,2586	1/1:2,7:22:24.08:1805,24,0	1/1:5,12:25:51.18:3605,51,0	1/1:7,12:24:51.17:3224,51,0	1/1:1,4:8:9.03:667,9,0	1/1:3,1:6:6.02:452,6,0	1/1:7,3:13:39.13:2187,39,0	1/1:9,19:32:75.26:5582,75,0	1/1:3,1:16:6.02:451,6,0	0/0:18,0:18:48.14:0,48,1874	0/0:11,0:11:33.11:0,33,1358	0/0:9,0:9:27.09:0,27,1099	1/1:7,14:28:60.21:4358,60,0	1/1:10,5:22:57.18:3387,57,0	1/1:8,11:24:54.19:4027,54,0	1/1:0,3:11:9.03:679,9,0
chr10	63749855	.	CAT	C	2272.76	PASS	AB=0.854;AC=39;AF=0.813;AN=48;BaseQRankSum=-3.833;DP=206;FS=0.000;HRun=0;HaplotypeScore=27.7356;InbreedingCoeff=0.3489;MQ=64.49;MQ0=3;MQRankSum=0.895;QD=14.85;ReadPosRankSum=3.077;VQSLOD=2.9306;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,8:16:12.04:148,12,0	1/1:1,1:2:1.51:35,2,0	0/1:6,0:2:0:0,0,0	0/1:16,0:8:5.94:6,0,28	./.	1/1:0,5:5:12.04:148,12,0	1/1:1,2:3:6.02:74,6,0	0/0:40,0:29:25.76:0,26,198	1/1:0,1:1:3.01:37,3,0	1/1:2,10:12:27.07:318,27,0	1/1:2,1:3:4.56:41,5,0	1/1:2,1:3:3.01:37,3,0	0/0:5,0:5:9.01:0,9,121	1/1:2,0:2:3.01:36,3,0	1/1:1,2:3:6.02:74,6,0	1/1:4,3:7:3.01:37,3,0	1/1:5,13:18:29.88:346,30,0	0/1:2,7:9:27.81:199,0,28	1/1:9,4:11:6:60,6,0	1/1:3,1:4:3.01:37,3,0	1/1:1,5:6:12.04:147,12,0	./.	0/0:2,0:2:3.01:0,3,49	./.	1/1:0,5:5:12.04:148,12,0	./.	1/1:0,5:5:9.03:111,9,0	1/1:0,14:14:30.09:369,30,0
chr10	63749871	.	T	TAG	466.47	PASS	AC=4;AF=0.080;AN=50;BaseQRankSum=-4.166;DP=186;FS=2.468;HRun=0;HaplotypeScore=34.1341;InbreedingCoeff=0.4744;MQ=69.52;MQ0=3;MQRankSum=-0.550;QD=15.05;ReadPosRankSum=-1.733;VQSLOD=2.9637;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:17.94:0,18,139	0/0:2,0:2:6:0,6,66	1/1:7,0:3:0.98:2,1,0	0/0:13,0:8:11.75:0,12,120	./.	0/0:6,0:6:14.95:0,15,115	0/0:3,0:3:5.98:0,6,46	1/1:9,15:18:22.46:557,22,0	0/0:3,0:3:5.99:0,6,48	0/0:10,0:10:26.49:0,26,193	0/0:4,0:4:5.99:0,6,64	0/0:2,0:2:5.99:0,6,48	0/0:4,0:4:12.03:0,12,156	0/0:2,0:2:5.49:0,5,34	0/0:3,0:3:8.97:0,9,71	0/0:5,0:5:8.98:0,9,73	0/0:14,0:14:29.75:0,30,217	0/0:8,0:8:20.94:0,21,179	0/0:8,0:7:17.98:0,18,154	0/0:4,0:4:11.95:0,12,93	0/0:6,0:6:14.94:0,15,115	./.	0/0:5,0:5:9:0,9,94	0/0:1,0:1:2.74:0,3,12	0/0:9,0:9:20.90:0,21,160	./.	0/0:7,0:7:14.86:0,15,108	0/0:17,0:17:38.85:0,39,296
chr10	63750304	.	G	GT	6667.97	PASS	AB=0.587;AC=34;AF=0.607;AN=56;BaseQRankSum=-10.083;DP=636;FS=3.852;HRun=11;HaplotypeScore=56.2660;InbreedingCoeff=0.8058;MQ=54.14;MQ0=65;MQRankSum=-0.078;QD=16.88;ReadPosRankSum=2.403;VQSLOD=5.8406;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:31:74.67:0,75,580	0/0:6,0:6:14.94:0,15,116	0/0:23,0:9:14.80:0,15,109	0/0:15,0:5:7.27:0,7,49	0/0:5,0:38:42.67:0,43,129	1/1:1,11:12:30.06:304,30,0	1/1:6,11:14:27.06:274,27,0	0/0:9,0:23:41.32:0,41,120	1/1:4,9:12:30.02:293,30,0	1/1:9,14:21:3.89:257,4,0	1/1:5,18:23:43.37:491,43,0	1/1:3,10:13:31.29:299,31,0	0/0:15,0:16:34.64:0,35,253	1/1:8,15:18:33.07:335,33,0	0/1:4,15:17:4.38:323,0,4	1/1:0,15:15:42.08:426,42,0	1/1:12,26:32:65.97:654,66,0	1/1:3,9:12:9.79:270,10,0	1/1:5,15:16:45:430,45,0	1/1:7,28:35:45.83:622,46,0	0/1:5,8:15:13.67:209,0,14	0/0:24,1:24:29.30:0,29,408	0/0:20,1:20:14.38:0,14,294	0/0:25,0:27:54.86:0,55,406	1/1:3,12:16:29.73:272,30,0	1/1:7,17:24:4.71:392,5,0	1/1:6,27:31:39.84:572,40,0	1/1:7,9:16:24.05:244,24,0
chr10	63750464	.	AACTT	A	8329.29	PASS	AB=0.617;AC=32;AF=0.615;AN=52;BaseQRankSum=8.712;DP=579;FS=1.135;HRun=0;HaplotypeScore=69.0717;InbreedingCoeff=0.5989;MQ=34.38;MQ0=74;MQRankSum=0.761;QD=23.33;ReadPosRankSum=1.587;VQSLOD=4.5817;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:23:12.04:0,12,319	0/0:7,0:6:9.03:0,9,240	./.	./.	0/0:35,1:29:39.13:0,39,1021	1/1:2,12:13:21:353,21,0	1/1:7,13:14:18.06:333,18,0	0/0:36,0:19:54.19:0,54,1405	1/1:4,14:17:39.13:725,39,0	0/1:9,14:19:99:669,0,423	1/1:3,13:11:12.04:224,12,0	1/1:3,17:19:30.03:519,30,0	0/0:29,0:25:51.18:0,51,1317	1/1:4,19:21:39.07:689,39,0	1/1:2,24:25:57.06:985,57,0	1/1:1,20:19:44.66:800,45,0	1/1:15,16:24:8.95:129,9,0	1/1:5,2:2:3.01:56,3,0	0/1:6,10:14:99:405,0,204	1/1:3,18:18:32.67:538,33,0	0/1:8,15:19:38.78:225,0,39	0/0:15,0:15:24.08:0,24,639	0/0:19,0:15:12.04:0,12,303	0/0:16,0:15:21.07:0,21,524	1/1:0,17:15:24.08:443,24,0	0/1:11,15:22:99:717,0,480	1/1:3,17:20:23.95:445,24,0	1/1:8,5:11:5.95:72,6,0
chr10	63750909	.	G	GT	7458.22	PASS	AB=0.557;AC=34;AF=0.607;AN=56;BaseQRankSum=-11.299;DP=471;FS=2.839;HRun=8;HaplotypeScore=51.0095;InbreedingCoeff=0.8610;MQ=67.24;MQ0=1;MQRankSum=-0.836;QD=25.54;ReadPosRankSum=1.877;VQSLOD=5.6740;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:65.86:0,66,586	0/0:12,0:12:30.01:0,30,271	0/0:19,0:10:8.53:0,9,112	0/0:17,0:13:17.82:0,18,206	0/0:26,0:26:60.12:0,60,300	1/1:2,15:17:45.13:517,45,0	1/1:2,13:15:8.64:351,9,0	0/0:24,0:25:56.48:0,56,385	1/1:1,14:15:30.09:346,30,0	1/1:2,14:16:39.10:438,39,0	1/1:3,13:16:27:280,27,0	1/1:5,6:11:21.06:242,21,0	0/0:13,0:13:30.01:0,30,274	1/1:1,9:10:24.07:277,24,0	1/1:1,15:16:35.86:413,36,0	0/1:4,12:16:15.78:342,0,16	0/1:4,22:26:0.67:560,0,1	1/1:1,8:9:21.06:242,21,0	1/1:4,12:15:36.09:405,36,0	1/1:4,14:18:14.70:423,15,0	1/1:0,8:8:21.06:242,21,0	0/0:9,0:9:24:0,24,216	0/0:16,0:16:41.76:0,42,384	0/0:15,0:15:43.49:0,43,373	1/1:2,16:19:48.08:537,48,0	1/1:1,25:25:72.11:789,72,0	1/1:3,23:26:60.14:675,60,0	1/1:0,12:12:33.10:381,33,0
chr10	63750914	.	TTTTG	T	1305.67	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=-0.865;DP=472;FS=14.050;HRun=0;HaplotypeScore=98.3908;InbreedingCoeff=0.7603;MQ=62.73;MQ0=3;MQRankSum=2.832;QD=18.65;ReadPosRankSum=-1.298;VQSLOD=1.7439;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:57.19:0,57,1239	0/0:11,0:11:30.10:0,30,720	0/1:17,0:8:15.96:16,0,66	0/0:21,0:13:21.05:0,21,411	1/1:4,22:26:60.12:908,60,0	0/0:19,0:19:36.04:0,36,606	0/0:15,0:15:30.03:0,30,520	1/1:14,12:24:36.07:511,36,0	0/0:15,0:15:30.09:0,30,519	0/0:16,0:16:45.15:0,45,838	0/0:16,0:16:23.28:0,23,374	0/0:10,0:10:24.08:0,24,439	0/0:14,0:14:30.09:0,30,672	0/0:9,0:9:12.04:0,12,215	0/0:15,0:15:30.02:0,30,539	0/0:14,0:14:33.11:0,33,628	0/0:26,0:26:48.16:0,48,938	0/0:10,0:10:16.87:0,17,280	0/0:16,0:15:27.09:0,27,491	0/0:16,0:16:39.12:0,39,704	0/0:8,0:8:15.05:0,15,276	0/0:8,0:8:24.08:0,24,574	0/0:17,0:17:44.71:0,45,884	0/0:15,0:15:38.16:0,38,842	0/0:21,0:21:42.14:0,42,714	0/0:27,0:26:54.18:0,54,1002	0/0:26,0:26:48.12:0,48,804	0/0:12,0:12:33.09:0,33,574
chr10	63751067	.	CGT	C	67.32	PASS	AB=0.826;AC=3;AF=0.065;AN=46;BaseQRankSum=0.764;DP=292;FS=1.462;HRun=0;HaplotypeScore=49.5754;InbreedingCoeff=-0.0254;MQ=59.02;MQ0=8;MQRankSum=1.855;QD=2.04;ReadPosRankSum=1.072;VQSLOD=1.4070;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:18,5:23:99:117,0,592	0/1:5,1:6:19.76:20,0,172	0/0:18,0:10:11.95:0,12,130	./.	./.	0/0:8,0:8:4.56:0,5,46	0/0:14,0:14:3:0,3,25	0/0:5,0:5:3:0,3,28	0/0:7,0:7:1.25:0,1,3	0/0:10,0:10:5.99:0,6,65	0/0:4,0:4:3:0,3,25	0/0:5,0:5:0.47:0,0,1	0/0:14,0:14:30.10:0,30,464	./.	0/0:15,0:15:6.47:0,6,54	0/0:11,0:11:8.91:0,9,79	0/0:11,0:11:9.39:0,9,64	./.	./.	0/0:2,0:2:2.99:0,3,24	0/0:17,0:16:6.02:0,6,87	0/1:2,1:4:22.66:23,0,101	0/0:6,0:6:18.06:0,18,279	0/0:34,1:34:31.84:0,32,942	0/0:9,0:9:1.55:0,2,4	0/0:6,0:6:2.94:0,3,18	0/0:14,0:12:2.92:0,3,17	0/0:6,0:6:3.75:0,4,9
chr10	63751174	.	AGAGAGAGAGAGAGAGAGAGAAC	A	3447.51	PASS	AB=0.807;AC=17;AF=0.304;AN=56;BaseQRankSum=7.802;DP=531;FS=22.466;HRun=0;HaplotypeScore=223.4643;InbreedingCoeff=0.0278;MQ=47.71;MQ0=16;MQRankSum=-0.560;QD=13.79;ReadPosRankSum=2.701;VQSLOD=1.1505;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:33:61.62:0,62,3844	0/0:8,0:8:14.23:0,14,483	0/0:8,0:5:15.05:0,15,439	0/0:9,0:5:14.54:0,15,244	0/1:9,0:10:0:0,0,0	0/1:11,9:20:99:163,0,117	0/0:23,0:23:8.69:0,9,40	0/1:22,0:22:99:150,0,1078	0/1:11,15:26:70.88:204,0,71	1/1:13,0:13:9.99:494,10,0	0/0:18,0:18:5.98:0,6,47	0/1:11,11:21:12.26:157,0,12	0/0:14,0:13:33.11:0,33,1102	0/0:7,8:13:8.94:0,9,66	0/0:31,0:30:4.71:0,5,19	0/0:25,1:26:8.90:0,9,109	0/1:27,1:27:46.52:128,0,47	0/1:2,2:3:66.36:177,0,66	1/1:7,8:13:10.70:826,11,0	0/1:15,1:15:21.52:22,0,80	0/0:8,20:26:0.94:0,1,1	0/0:11,0:11:18.06:0,18,1009	0/0:21,0:21:25.02:0,25,1076	0/0:35,0:32:61.39:0,61,3559	0/1:18,0:18:30.44:60,0,30	0/1:14,9:22:32.60:619,0,33	0/1:12,10:21:99:330,0,105	1/1:3,8:8:3.01:117,3,0
chr10	63751176	.	AGAGAGAGAGAGAGAGAGAAC	A	3187.51	PASS	AB=0.994;AC=17;AF=0.340;AN=50;BaseQRankSum=8.123;DP=485;FS=14.757;HRun=0;HaplotypeScore=198.0095;InbreedingCoeff=0.0856;MQ=51.09;MQ0=15;MQRankSum=-0.596;QD=15.63;ReadPosRankSum=2.712;VQSLOD=1.5642;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:33:64.63:0,65,3423	0/0:8,0:8:14.23:0,14,411	0/0:9,0:6:18.01:0,18,384	0/0:10,0:6:17.93:0,18,294	./.	0/1:18,0:18:73.34:147,0,73	0/0:24,0:24:2.36:0,2,3	0/1:21,0:21:99:154,0,849	0/1:21,0:21:50.86:222,0,51	1/1:3,9:12:12.78:452,13,0	0/0:18,0:18:5.92:0,6,39	1/1:16,0:15:3.01:167,3,0	0/0:15,0:14:36.08:0,36,996	0/0:14,0:12:5.92:0,6,38	./.	0/0:24,0:24:8.96:0,9,83	0/1:24,0:23:37.68:120,0,38	0/1:4,0:3:62.29:155,0,62	1/1:13,1:13:14.87:789,15,0	0/1:15,0:14:24.60:25,0,46	./.	0/0:12,0:12:21.07:0,21,936	0/0:19,0:19:25.02:0,25,954	0/0:35,0:32:58.05:0,58,3177	0/1:13,0:13:13.42:72,0,13	0/1:15,0:15:8.77:634,0,9	0/1:18,1:18:64.89:313,0,65	1/1:12,0:9:3.01:97,3,0
chr10	63751178	.	AGAGAGAGAGAGAGAGAAC	A	3139.31	PASS	AB=0.851;AC=23;AF=0.426;AN=54;BaseQRankSum=8.330;DP=459;FS=5.790;HRun=0;HaplotypeScore=175.5963;InbreedingCoeff=0.3123;MQ=51.85;MQ0=15;MQRankSum=-0.289;QD=13.19;ReadPosRankSum=2.311;VQSLOD=2.1471;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:32:64.63:0,65,2918	0/0:8,0:8:14.23:0,14,368	0/0:9,0:6:18.01:0,18,320	0/0:12,0:7:21.07:0,21,348	0/1:9,0:9:0:0,0,0	0/1:17,0:17:19.85:137,0,20	0/1:14,0:14:0:0,0,0	0/1:20,0:20:99:154,0,640	0/1:19,1:20:12.83:263,0,13	1/1:12,0:12:14.45:434,14,0	0/0:3,15:18:5.83:0,6,33	1/1:13,1:13:3.01:149,3,0	0/0:15,0:14:36.08:0,36,901	0/0:14,0:12:2.92:0,3,17	0/1:3,20:23:0:0,0,0	0/0:7,17:24:5.91:0,6,52	0/1:5,17:21:10.69:149,0,11	0/1:4,0:3:45.75:136,0,46	1/1:14,0:13:27.83:746,28,0	0/1:5,9:13:24.56:28,0,25	./.	0/0:12,0:12:21.07:0,21,791	0/0:18,0:18:25:0,25,828	0/0:35,0:32:58.06:0,58,2818	1/1:11,1:12:0.89:85,1,0	1/1:13,1:14:30.09:653,30,0	1/1:17,1:17:6.01:293,6,0	1/1:11,0:9:3.01:78,3,0
chr10	63751180	.	AGAGAGAGAGAGAGAAC	A	2981.91	PASS	AB=0.993;AC=28;AF=0.560;AN=50;BaseQRankSum=8.557;DP=449;FS=4.630;HRun=0;HaplotypeScore=160.2114;InbreedingCoeff=0.5224;MQ=52.59;MQ0=15;MQRankSum=-1.197;QD=11.60;ReadPosRankSum=1.707;VQSLOD=2.6521;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:32:64.63:0,65,2491	0/0:9,0:9:17.24:0,17,366	0/0:11,0:7:21.02:0,21,343	0/0:13,0:8:24.08:0,24,400	./.	1/1:15,0:15:2.09:124,2,0	0/1:12,0:12:0:0,0,0	0/1:21,0:21:99:190,0,441	1/1:18,1:19:6.02:263,6,0	1/1:12,0:12:22.34:425,22,0	0/1:17,0:17:0:0,0,0	1/1:13,1:13:3.01:132,3,0	0/0:17,0:16:42.10:0,42,906	./.	0/1:23,0:23:0:0,0,0	0/1:21,1:22:0:0,0,0	1/1:20,0:20:2.93:122,3,0	0/1:4,0:3:27.86:118,0,28	1/1:13,0:12:28.06:692,28,0	1/1:14,0:13:3.01:36,3,0	./.	0/0:12,0:12:21.07:0,21,678	0/0:19,0:19:25.02:0,25,730	0/0:34,0:31:57.63:0,58,2468	1/1:3,8:11:0.89:110,1,0	1/1:11,0:11:30.10:614,30,0	1/1:18,0:17:6.02:255,6,0	1/1:11,0:9:3.01:60,3,0
chr10	63751194	.	AACGAAC	A	800.41	PASS	AB=0.947;AC=17;AF=0.304;AN=56;BaseQRankSum=5.334;DP=396;FS=4.762;HRun=0;HaplotypeScore=111.3846;InbreedingCoeff=0.1364;MQ=59.80;MQ0=7;MQRankSum=-2.040;QD=4.85;ReadPosRankSum=4.375;VQSLOD=1.4178;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:23:36.39:36,0,1457	0/0:9,0:9:21.03:0,21,568	0/0:17,0:12:36.12:0,36,1163	0/0:19,0:14:42.14:0,42,1418	0/1:2,7:9:0:0,0,0	0/1:10,0:10:8.36:8,0,68	0/0:0,0:15:9.02:0,9,98	1/1:4,14:18:7.23:666,7,0	0/1:17,0:17:26.06:26,0,112	0/1:11,0:11:27.83:36,0,28	0/0:15,0:15:30.07:0,30,324	0/1:13,0:13:10.10:10,0,81	0/0:18,0:18:53.92:0,54,1502	0/0:9,0:8:6.01:0,6,61	0/0:22,0:22:8.90:0,9,99	0/0:19,0:19:14.85:0,15,154	0/1:18,0:18:10.99:11,0,67	1/1:2,0:2:2.96:19,3,0	0/1:12,0:12:25.49:55,0,25	0/0:11,0:10:18.11:0,18,218	0/0:22,0:21:9.02:0,9,91	0/0:10,0:10:27.09:0,27,808	0/0:11,0:11:24.08:0,24,683	0/0:24,0:22:54.19:0,54,1563	0/0:10,0:10:12:0,12,115	1/1:10,0:10:3.55:49,4,0	0/1:13,0:12:31.70:32,0,47	1/1:9,0:9:1.82:5,2,0
chr10	63752539	.	TAC	T	223.25	PASS	AB=0.848;AC=11;AF=0.212;AN=52;BaseQRankSum=-1.397;DP=488;FS=5.796;HRun=0;HaplotypeScore=75.8799;InbreedingCoeff=0.4949;MQ=63.69;MQ0=21;MQRankSum=0.960;QD=2.40;ReadPosRankSum=0.094;VQSLOD=0.7625;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:13:2.84:14,3,0	1/1:2,0:4:5.68:28,6,0	./.	./.	0/0:18,0:17:5.91:0,6,66	0/0:23,0:23:8.99:0,9,76	0/0:16,0:16:2.72:0,3,26	0/0:17,0:17:0:0,0,0	0/0:19,0:18:28.11:0,28,267	0/0:16,0:16:25.27:0,25,248	0/0:10,0:9:8.04:0,8,58	0/0:18,0:17:12.02:0,12,136	1/1:14,5:19:2.90:32,3,0	0/0:10,0:10:6:0,6,52	0/0:27,0:27:9:0,9,78	0/0:12,0:12:8.04:0,8,58	0/0:20,0:19:12.43:0,12,98	0/0:11,0:11:5.98:0,6,46	0/0:14,0:13:12.01:0,12,119	0/0:11,0:11:6:0,6,52	0/0:30,0:30:12.01:0,12,122	1/1:11,4:14:2.78:31,3,0	1/1:8,1:12:5.88:59,6,0	0/1:23,1:24:34.93:192,0,35	0/0:16,0:16:12.02:0,12,134	0/0:14,0:13:18.89:0,19,169	0/0:28,0:27:16.79:0,17,127	0/0:12,0:10:11.98:0,12,107
chr10	63752589	.	C	CCAT	935.10	PASS	AB=0.666;AC=26;AF=0.464;AN=56;BaseQRankSum=3.762;DP=595;FS=3.601;HRun=0;HaplotypeScore=110.3755;InbreedingCoeff=-0.0670;MQ=67.98;MQ0=18;MQRankSum=-0.115;QD=2.13;ReadPosRankSum=0.674;VQSLOD=2.0042;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:20.01:0,20,106	0/0:8,0:8:17.21:0,17,95	0/0:32,0:22:57.85:0,58,985	0/0:32,0:16:42.14:0,42,749	0/1:2,0:19:9.99:10,0,33	1/1:2,0:26:5.97:55,6,0	1/1:3,0:19:2.84:36,3,0	0/1:27,0:26:41.75:42,0,163	0/1:6,1:24:55.55:104,0,56	0/1:23,0:22:53.53:54,0,115	1/1:2,1:19:6.02:70,6,0	0/1:5,0:20:35.71:37,0,36	0/0:23,0:23:54.11:0,54,865	1/1:2,0:17:5.96:49,6,0	1/1:2,0:22:8.56:73,9,0	1/1:2,0:19:5.74:54,6,0	0/1:3,0:18:8.61:88,0,9	0/1:3,0:15:13.60:30,0,14	0/1:4,0:21:84.63:85,0,143	0/1:21,0:23:51.62:52,0,154	0/1:4,0:31:12.83:62,0,13	0/0:13,0:13:26.98:0,27,425	0/0:13,0:13:33.09:0,33,531	0/0:23,0:19:47.80:0,48,599	0/1:5,0:22:37.49:56,0,37	0/1:3,0:30:31.76:32,0,252	0/1:4,0:21:6.32:110,0,6	0/1:11,0:12:13.04:13,0,85
chr10	63753011	.	C	CGT	14969.26	PASS	AB=0.633;AC=35;AF=0.625;AN=56;BaseQRankSum=-15.964;DP=645;FS=2.805;HRun=0;HaplotypeScore=72.3054;InbreedingCoeff=0.9231;MQ=79.27;MQ0=7;MQRankSum=-3.756;QD=36.78;ReadPosRankSum=4.427;VQSLOD=6.9506;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:51.04:0,51,622	0/0:10,0:10:30.10:0,30,390	0/0:30,0:30:71.69:0,72,875	0/0:19,0:20:41.21:0,41,486	0/0:35,0:35:96.31:0,96,1248	1/1:6,23:29:57.19:965,57,0	1/1:2,16:18:26.63:552,27,0	0/0:38,0:38:66.34:0,66,1144	1/1:2,19:20:42.14:714,42,0	1/1:4,17:22:54.17:893,54,0	1/1:1,26:27:57.20:969,57,0	1/1:2,12:14:30.10:510,30,0	0/0:13,0:13:33.11:0,33,429	1/1:0,19:20:48.16:816,48,0	1/1:3,28:31:69.24:1174,69,0	1/1:3,16:19:48.16:816,48,0	1/1:2,27:29:63.22:1062,63,0	0/1:8,11:19:52.56:486,0,53	1/1:5,18:23:54.17:885,54,0	1/1:4,32:34:81.28:1351,81,0	1/1:1,19:19:42.14:714,42,0	0/0:15,0:15:36.07:0,36,449	0/0:33,0:33:93.22:0,93,1171	0/0:17,0:17:51.17:0,51,663	1/1:5,20:25:45.15:765,45,0	1/1:0,19:19:54.18:919,54,0	1/1:1,24:23:57.20:969,57,0	1/1:0,9:9:24.08:408,24,0
chr10	63755064	.	GTTC	G	13331.06	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=11.593;DP=460;FS=4.533;HRun=0;HaplotypeScore=70.9978;InbreedingCoeff=0.9877;MQ=78.96;MQ0=0;MQRankSum=-0.702;QD=42.87;ReadPosRankSum=6.155;VQSLOD=6.1024;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:45.13:0,45,950	0/0:3,0:3:9.03:0,9,199	0/0:14,0:14:39.12:0,39,720	0/0:10,0:10:22.63:0,23,417	0/0:22,0:22:66.23:0,66,1441	1/1:1,14:15:39.13:627,39,0	1/1:0,12:12:30.10:482,30,0	0/0:29,0:29:78.25:0,78,1573	1/1:0,23:23:66.23:1061,66,0	1/1:2,26:28:72.20:1104,72,0	1/1:2,21:23:57.67:916,58,0	1/1:0,11:11:30.10:482,30,0	0/0:22,0:22:66.23:0,66,1442	1/1:0,17:17:48.16:771,48,0	1/1:1,16:17:42.14:675,42,0	1/1:1,12:13:36.12:578,36,0	1/1:1,23:24:66.23:1060,66,0	1/1:1,19:20:57.15:887,57,0	1/1:2,8:10:24.01:302,24,0	1/1:0,16:16:45.15:723,45,0	1/1:1,6:7:15.05:241,15,0	0/0:13,0:13:39.13:0,39,861	0/0:10,0:10:30.09:0,30,619	0/0:11,0:11:33.11:0,33,729	1/1:0,12:12:33.11:530,33,0	1/1:2,28:30:84.29:1349,84,0	1/1:1,23:24:69.24:1109,69,0	1/1:0,9:9:27.09:434,27,0
chr10	63755187	.	CCTG	C	641.16	PASS	AC=16;AF=0.727;AN=22;BaseQRankSum=4.988;DP=399;FS=0.000;HRun=0;HaplotypeScore=56.2568;InbreedingCoeff=0.6580;MQ=74.16;MQ0=5;MQRankSum=-0.059;QD=5.30;ReadPosRankSum=-0.833;VQSLOD=1.4655;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	./.	1/1:13,0:14:2.98:21,3,0	./.	./.	1/1:13,6:19:12.04:152,12,0	./.	./.	1/1:10,2:13:5.99:59,6,0	0/0:24,0:24:21.04:0,21,357	1/1:16,3:19:15.01:173,15,0	1/1:11,3:14:6.02:76,6,0	1/1:4,0:7:5.95:42,6,0	1/1:12,8:20:12.04:152,12,0	0/0:11,0:11:3.01:0,3,38	./.	./.	./.	./.	./.	0/0:34,0:34:42.14:0,42,784	./.	./.	1/1:14,1:15:6.02:76,6,0	./.
chr10	63756523	.	TA	T	426.76	PASS	AB=0.960;AC=37;AF=0.661;AN=56;BaseQRankSum=13.210;DP=514;FS=2.660;HRun=14;HaplotypeScore=92.8817;InbreedingCoeff=0.4497;MQ=64.48;MQ0=0;MQRankSum=-6.612;QD=1.13;ReadPosRankSum=5.304;VQSLOD=-0.6609;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:21:31.38:0,31,236	0/0:12,0:12:29.93:0,30,260	0/1:17,1:13:16.70:17,0,123	0/1:11,0:7:3.28:3,0,23	0/0:35,3:39:29.24:0,29,621	1/1:17,0:17:16.13:47,16,0	1/1:16,0:16:17.82:47,18,0	0/0:27,0:27:35.79:0,36,291	1/1:21,0:21:16.38:45,16,0	1/1:22,0:22:11.26:37,11,0	1/1:16,0:16:14.16:39,14,0	1/1:14,0:14:12.63:33,13,0	0/0:21,0:21:56.87:0,57,486	1/1:13,0:13:11.07:30,11,0	1/1:18,0:18:12.89:34,13,0	1/1:13,0:13:10.74:29,11,0	0/1:15,0:15:6.01:6,0,7	1/1:4,0:4:2.78:8,3,0	0/1:19,0:19:2.60:39,0,3	0/1:34,0:34:7.36:21,0,7	1/1:11,0:11:1.03:4,1,0	0/1:25,2:27:4.58:5,0,369	0/1:12,3:16:29.04:29,0,153	0/0:15,1:16:18.45:0,18,310	1/1:16,0:16:12.86:36,13,0	1/1:21,0:21:11.07:44,11,0	1/1:29,0:29:3.28:41,3,0	1/1:7,0:7:7.21:19,7,0
chr10	63756532	.	AAAAAAC	A	4202.96	PASS	AB=0.966;AC=28;AF=0.500;AN=56;BaseQRankSum=12.769;DP=519;FS=0.372;HRun=0;HaplotypeScore=122.9692;InbreedingCoeff=0.4610;MQ=63.59;MQ0=0;MQRankSum=-3.561;QD=13.30;ReadPosRankSum=5.496;VQSLOD=2.1641;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:53.86:0,54,1109	0/0:12,0:12:36.12:0,36,1073	0/0:16,0:11:29.95:0,30,665	0/0:12,0:8:12.51:0,13,256	0/0:34,0:34:99:0,102,2516	1/1:17,1:18:6.10:254,6,0	0/1:18,0:18:4.03:190,0,4	0/0:30,0:30:79.91:0,80,1534	0/1:21,2:23:24.70:296,0,25	1/1:24,0:24:13.73:367,14,0	1/1:19,2:21:39.86:383,40,0	0/1:14,0:14:18.24:144,0,18	0/0:22,0:22:66.13:0,66,1568	0/1:12,1:13:3.23:161,0,3	1/1:18,1:19:20.84:206,21,0	1/1:13,0:13:26.66:209,27,0	1/1:11,0:11:11.81:114,12,0	1/1:4,0:4:6.03:65,6,0	1/1:21,0:21:28.15:348,28,0	0/1:31,2:33:4.49:391,0,4	0/1:13,1:14:17.05:17,0,19	0/0:24,0:24:66.63:0,67,1714	0/0:17,0:17:42.11:0,42,947	0/0:15,0:15:42.14:0,42,1223	1/1:14,2:16:25.95:269,26,0	1/1:18,1:19:46.21:381,46,0	0/1:26,0:26:25.01:326,0,25	0/1:9,0:9:9.28:83,0,9
chr10	63756533	.	AAAAAC	A	7814.21	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=9.642;DP=523;FS=0.791;HRun=0;HaplotypeScore=102.5668;InbreedingCoeff=0.9418;MQ=63.52;MQ0=0;MQRankSum=-4.491;QD=24.65;ReadPosRankSum=4.677;VQSLOD=4.5382;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:49.09:0,49,921	0/0:13,0:13:39.12:0,39,944	0/0:16,0:11:30.06:0,30,591	0/0:12,0:8:12.10:0,12,207	0/0:34,0:34:99:0,100,2159	1/1:11,8:19:39.32:549,39,0	1/1:3,15:18:29.97:502,30,0	0/0:33,0:33:84.98:0,85,1403	1/1:10,13:23:17.50:512,18,0	1/1:5,19:24:53.78:703,54,0	1/1:4,17:21:41.06:516,41,0	1/1:1,13:14:20.99:375,21,0	0/0:22,0:22:60.17:0,60,1340	1/1:3,10:13:18.02:306,18,0	1/1:4,15:19:21.03:360,21,0	1/1:1,12:13:26.51:402,27,0	1/1:2,9:11:11.57:180,12,0	1/1:2,2:4:8.11:126,8,0	1/1:5,16:21:32.98:667,33,0	1/1:11,22:33:35.68:599,36,0	1/1:4,10:14:2.20:52,2,0	0/0:24,0:24:61.71:0,62,1473	0/0:16,0:16:39.12:0,39,796	0/0:15,0:15:42.13:0,42,1041	1/1:5,11:16:30:410,30,0	1/1:4,15:19:48.08:680,48,0	1/1:8,18:26:20.05:661,20,0	1/1:3,6:9:11.98:214,12,0
chr10	63756942	.	CT	C	18337.54	PASS	AB=0.857;AC=55;AF=0.982;AN=56;BaseQRankSum=-3.436;DP=570;FS=15.219;HRun=4;HaplotypeScore=58.0889;InbreedingCoeff=-0.0204;MQ=75.86;MQ0=0;MQRankSum=-3.345;QD=32.17;ReadPosRankSum=2.214;VQSLOD=3.8654;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,31:32:84.26:1008,84,0	1/1:1,16:17:42.13:504,42,0	1/1:7,2:9:6.44:130,6,0	0/1:10,2:12:10.97:122,0,11	1/1:1,28:29:75.23:900,75,0	1/1:0,19:19:51.16:612,51,0	1/1:0,11:11:27.08:324,27,0	1/1:2,29:31:87.24:1021,87,0	1/1:0,20:20:54.17:648,54,0	1/1:2,34:36:99:1224,102,0	1/1:0,25:25:72.22:864,72,0	1/1:2,18:20:54.16:641,54,0	1/1:0,11:11:30.09:360,30,0	1/1:1,16:17:48.15:576,48,0	1/1:0,20:20:51.16:612,51,0	1/1:0,17:17:48.15:576,48,0	1/1:0,23:23:69.21:827,69,0	1/1:1,9:10:27.08:319,27,0	1/1:1,22:23:63.17:734,63,0	1/1:1,40:41:99:1368,114,0	1/1:0,16:16:42.13:504,42,0	1/1:0,19:19:54.17:648,54,0	1/1:0,17:17:45.14:540,45,0	1/1:0,8:8:24.07:288,24,0	1/1:0,14:14:42.13:504,42,0	1/1:2,23:25:69.21:828,69,0	1/1:0,37:37:99:1296,108,0	1/1:0,11:11:30.09:360,30,0
chr10	63760469	.	G	GA	10544.72	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-9.882;DP=561;FS=7.744;HRun=8;HaplotypeScore=56.4752;InbreedingCoeff=0.9876;MQ=74.73;MQ0=0;MQRankSum=-3.187;QD=29.13;ReadPosRankSum=1.901;VQSLOD=5.1016;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:60.03:0,60,549	0/0:12,0:12:30.02:0,30,274	0/0:17,0:17:10.46:0,10,211	0/0:20,0:20:32.05:0,32,263	0/0:27,0:27:66.02:0,66,604	1/1:3,28:31:84.24:961,84,0	1/1:2,15:17:45.13:519,45,0	0/0:22,0:22:50.97:0,51,459	1/1:2,19:21:45.13:520,45,0	1/1:7,18:25:54.13:610,54,0	1/1:2,23:25:60.18:692,60,0	1/1:1,22:23:60.11:675,60,0	0/0:22,0:22:54:0,54,489	1/1:1,12:13:33.10:381,33,0	1/1:0,11:11:33.10:381,33,0	1/1:1,14:15:42.12:485,42,0	1/1:0,22:22:63.19:727,63,0	1/1:1,10:11:30.09:346,30,0	1/1:3,22:25:69.20:795,69,0	1/1:3,26:29:72.17:816,72,0	1/1:4,11:15:33.10:381,33,0	0/0:19,0:19:50.99:0,51,457	0/0:22,0:22:57.01:0,57,517	0/0:15,0:15:33.02:0,33,302	1/1:5,13:18:11.65:388,12,0	1/1:2,25:27:75.22:865,75,0	1/1:2,25:27:66.20:761,66,0	1/1:0,7:7:21.06:242,21,0
chr10	63760588	.	C	CA	3898.30	PASS	AB=0.784;AC=16;AF=0.286;AN=56;BaseQRankSum=-11.073;DP=568;FS=89.400;HRun=1;HaplotypeScore=153.9216;InbreedingCoeff=-0.3873;MQ=66.21;MQ0=0;MQRankSum=-12.389;QD=9.77;ReadPosRankSum=2.490;VQSLOD=-0.0098;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:57.12:0,57,771	0/1:4,6:10:99:238,0,137	0/0:17,0:17:24.38:0,24,451	0/0:9,0:8:21.02:0,21,260	0/1:17,14:31:99:515,0,471	0/0:24,0:24:72.17:0,72,979	0/0:12,0:12:36.12:0,36,501	0/0:21,0:21:59.79:0,60,825	0/0:11,0:11:33.11:0,33,461	0/1:19,17:36:99:647,0,620	0/1:22,12:33:99:329,0,745	0/1:12,2:14:45.28:45,0,459	0/1:8,3:11:99:101,0,301	0/1:13,1:14:2.19:2,0,501	0/0:15,0:15:45.15:0,45,628	0/1:15,2:17:42.09:42,0,537	0/1:21,3:24:20.32:20,0,803	0/0:9,0:9:27.09:0,27,377	0/0:18,0:18:51.14:0,51,692	0/1:31,19:50:99:706,0,1065	0/0:8,0:8:23.95:0,24,309	0/1:18,3:21:38.61:39,0,554	0/1:21,7:28:99:233,0,716	0/0:6,0:6:18.06:0,18,251	0/1:22,14:36:99:521,0,748	0/1:29,6:35:99:166,0,1069	0/1:27,5:32:99:127,0,1010	0/1:2,4:6:25.33:166,0,25
chr10	63761542	.	CTTTTG	C	3009.04	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=4.744;DP=629;FS=0.539;HRun=0;HaplotypeScore=136.0152;InbreedingCoeff=0.9906;MQ=73.08;MQ0=0;MQRankSum=-7.884;QD=47.02;ReadPosRankSum=-4.370;VQSLOD=2.5548;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:93.32:0,93,2812	0/0:15,0:15:45.14:0,45,1298	0/0:13,0:13:24.08:0,24,627	0/0:8,0:8:18.06:0,18,458	1/1:3,32:35:78.27:1615,78,0	0/0:29,0:29:78.27:0,78,2331	0/0:24,0:24:69.24:0,69,2102	1/1:4,25:29:75.25:1516,75,0	0/0:22,0:22:66.23:0,66,2029	0/0:26,0:26:75.26:0,75,2261	0/0:24,0:24:60.21:0,60,1841	0/0:23,0:23:69.24:0,69,2064	0/0:25,0:25:72.25:0,72,2211	0/0:28,0:28:78.27:0,78,2398	0/0:26,0:26:72.25:0,72,2197	0/0:24,0:24:72.25:0,72,2214	0/0:16,0:16:48.16:0,48,1474	0/0:19,0:19:54.19:0,54,1606	0/0:27,0:27:81.28:0,81,2370	0/0:31,0:31:87.30:0,87,2670	0/0:24,0:24:69.24:0,69,2121	0/0:29,0:29:84.29:0,84,2582	0/0:16,0:16:48.16:0,48,1472	0/0:13,0:13:39.12:0,39,1090	0/0:12,0:12:36.12:0,36,1107	0/0:29,0:29:84.29:0,84,2490	0/0:23,0:22:63.22:0,63,1937	0/0:6,0:6:18.06:0,18,553
chr10	63761697	.	AC	A	7998.92	PASS	AB=0.950;AC=37;AF=0.661;AN=56;BaseQRankSum=3.405;DP=541;FS=1.384;HRun=10;HaplotypeScore=57.4581;InbreedingCoeff=0.8813;MQ=77.99;MQ0=1;MQRankSum=-2.859;QD=20.25;ReadPosRankSum=4.566;VQSLOD=5.5270;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:24.03:0,24,242	0/0:6,0:6:6.02:0,6,66	0/1:17,0:18:20.84:21,0,184	0/0:15,0:14:13.07:0,13,91	0/0:10,0:22:44.07:0,44,328	1/1:4,26:30:68.98:599,69,0	1/1:1,15:16:32.98:286,33,0	0/0:12,0:20:20.19:0,20,125	1/1:0,17:17:47.99:417,48,0	1/1:4,20:24:59.96:515,60,0	1/1:4,18:22:50.99:442,51,0	1/1:2,17:19:53.03:449,53,0	0/0:12,3:15:7:0,7,292	1/1:1,18:19:47.99:417,48,0	1/1:2,22:25:62.02:527,62,0	1/1:5,9:14:32.03:266,32,0	1/1:3,23:26:32.80:514,33,0	1/1:1,12:13:35.95:305,36,0	1/1:5,10:15:29.99:260,30,0	1/1:3,29:34:85.05:715,85,0	1/1:4,11:15:32.99:286,33,0	0/0:27,0:27:63.13:0,63,672	0/0:16,2:18:13.05:0,13,372	0/0:10,0:10:27.04:0,27,281	1/1:0,20:20:53.99:469,54,0	1/1:7,25:32:77.97:677,78,0	1/1:2,16:18:47.99:417,48,0	1/1:1,16:17:47.99:417,48,0
chr10	63762085	.	C	CTTTT	6568.83	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-4.286;DP=502;FS=7.110;HRun=13;HaplotypeScore=92.4228;InbreedingCoeff=0.8800;MQ=64.77;MQ0=2;MQRankSum=-4.578;QD=19.79;ReadPosRankSum=-4.800;VQSLOD=2.1425;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:35:77.37:0,77,597	0/0:3,0:5:5.85:0,6,46	0/0:13,0:8:4.61:0,5,27	0/0:12,0:10:5.09:0,5,133	0/0:23,0:23:44.58:0,45,541	1/1:2,2:17:23.99:374,24,0	1/1:3,4:9:12.04:209,12,0	0/0:8,0:31:65.41:0,65,478	1/1:4,12:16:16.61:293,17,0	1/1:11,12:24:39.08:725,39,0	1/1:10,8:19:25.32:369,25,0	1/1:4,7:11:9.03:168,9,0	0/0:12,0:13:25.08:0,25,296	1/1:8,5:13:12.04:236,12,0	1/1:4,8:13:14.96:213,15,0	1/1:5,10:15:16.70:336,17,0	1/1:16,2:18:36:500,36,0	1/1:8,11:18:25.29:489,25,0	1/1:14,8:20:37.84:522,38,0	1/1:12,8:23:32.93:379,33,0	1/1:5,0:5:4.83:42,5,0	0/0:9,0:9:11.91:0,12,152	0/0:13,0:14:22.02:0,22,247	0/0:13,0:13:23.83:0,24,285	1/1:8,2:25:21.03:295,21,0	1/1:12,12:23:46.63:701,47,0	1/1:17,16:38:42.31:637,42,0	1/1:3,0:4:5.99:79,6,0
chr10	63763136	.	AT	A	7141.73	PASS	AB=0.820;AC=38;AF=0.679;AN=56;BaseQRankSum=3.352;DP=622;FS=1.196;HRun=12;HaplotypeScore=70.0330;InbreedingCoeff=0.7118;MQ=73.54;MQ0=1;MQRankSum=-1.931;QD=15.20;ReadPosRankSum=3.793;VQSLOD=5.8167;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,1:35:57.12:0,57,735	0/0:9,0:9:15.03:0,15,152	0/1:18,1:17:12.62:13,0,67	0/1:6,1:6:13.99:14,0,38	0/0:6,0:19:43.20:0,43,248	1/1:5,26:31:71.70:557,72,0	1/1:5,12:20:41.95:296,42,0	0/0:9,0:33:69.32:0,69,390	1/1:2,16:18:41.84:325,42,0	1/1:5,23:30:72.79:546,73,0	1/1:3,21:25:55.79:423,56,0	1/1:2,12:14:27.78:211,28,0	0/1:20,3:23:12.60:13,0,428	0/1:3,9:12:0.66:139,0,1	1/1:6,19:26:49.83:377,50,0	1/1:5,17:24:51.75:383,52,0	1/1:4,21:27:60.83:453,61,0	1/1:4,13:19:39.93:290,40,0	1/1:5,19:25:55.75:419,56,0	1/1:6,18:25:52.49:400,52,0	1/1:2,13:15:38.84:302,39,0	0/0:22,0:24:60.83:0,61,589	0/0:21,2:23:13.63:0,14,494	0/0:9,0:9:21.04:0,21,213	1/1:3,23:28:61.79:470,62,0	1/1:5,30:35:89.61:693,90,0	1/1:5,27:32:76.72:586,77,0	1/1:4,10:14:29.86:232,30,0
chr10	63763526	.	GTT	G	3644.03	PASS	AB=0.784;AC=35;AF=0.625;AN=56;BaseQRankSum=1.010;DP=669;FS=0.000;HRun=17;HaplotypeScore=83.5940;InbreedingCoeff=0.6110;MQ=67.13;MQ0=16;MQRankSum=1.760;QD=8.24;ReadPosRankSum=5.729;VQSLOD=0.7198;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:47:85.27:0,85,788	0/0:4,0:7:20.38:0,20,187	0/0:51,0:17:17.26:0,17,148	0/1:54,0:16:8.64:9,0,65	0/1:11,2:27:6.72:7,0,152	1/1:4,13:19:26.44:241,26,0	1/1:4,13:20:17.35:208,17,0	0/0:27,0:34:51.92:0,52,435	1/1:5,16:27:37.42:286,37,0	1/1:11,10:23:33.71:262,34,0	1/1:3,16:24:11.61:305,12,0	1/1:5,3:9:8.69:71,9,0	0/0:20,0:22:46.18:0,46,445	1/1:8,6:14:11.42:87,11,0	1/1:11,13:27:25.84:176,26,0	1/1:5,9:16:0.57:170,1,0	1/1:7,19:28:8.73:241,9,0	1/1:5,10:17:29.55:225,30,0	0/1:16,2:19:20.24:164,0,20	1/1:4,9:15:13.96:133,14,0	0/1:13,3:23:1.62:149,0,2	0/0:24,1:25:36.19:0,36,548	0/0:15,0:19:41.43:0,41,450	0/0:19,0:19:43.86:0,44,415	1/1:6,10:17:26.44:201,26,0	1/1:9,15:24:39.71:319,40,0	1/1:2,22:25:36.68:352,37,0	0/1:7,4:11:13.19:39,0,13
chr10	63765797	.	T	TA	9642.69	PASS	AB=1.000;AC=53;AF=0.946;AN=56;BaseQRankSum=-2.565;DP=695;FS=2.993;HRun=0;HaplotypeScore=86.7155;InbreedingCoeff=0.5919;MQ=50.45;MQ0=126;MQRankSum=-1.704;QD=14.86;ReadPosRankSum=2.155;VQSLOD=6.4159;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,13:17:3.01:32,3,0	1/1:1,1:4:6.01:62,6,0	0/1:51,0:8:1.24:1,0,155	0/0:46,0:4:11.98:0,12,107	1/1:4,6:27:6.02:77,6,0	1/1:8,4:19:27.07:357,27,0	1/1:1,21:24:29.17:385,29,0	1/1:5,15:15:27.16:302,27,0	1/1:0,18:16:21.02:257,21,0	1/1:6,29:31:72.03:956,72,0	1/1:0,16:13:21.04:293,21,0	1/1:2,10:17:38.59:482,39,0	1/1:1,16:16:30.10:455,30,0	1/1:2,25:25:18.06:264,18,0	1/1:2,15:23:43.66:570,44,0	1/1:0,7:11:28.64:376,29,0	1/1:5,18:24:23.58:338,24,0	1/1:2,24:21:47.64:643,48,0	1/1:3,16:16:28.74:362,29,0	1/1:3,28:26:39.09:549,39,0	1/1:2,13:14:9.03:128,9,0	1/1:1,12:13:22.98:275,23,0	1/1:0,21:24:42.96:626,43,0	1/1:4,29:27:38.05:482,38,0	1/1:1,17:15:11.53:142,12,0	1/1:5,22:24:56.35:730,56,0	1/1:5,20:22:26.81:336,27,0	1/1:1,2:4:12.04:165,12,0
chr10	63765836	.	C	CAG	7312.41	PASS	AB=1.000;AC=40;AF=0.769;AN=52;BaseQRankSum=2.010;DP=644;FS=9.835;HRun=0;HaplotypeScore=147.7756;InbreedingCoeff=0.7831;MQ=47.58;MQ0=32;MQRankSum=1.488;QD=14.95;ReadPosRankSum=0.668;VQSLOD=4.3762;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:23:7.03:0,7,32	0/1:4,0:4:1.55:8,0,2	./.	./.	1/1:29,0:25:1.25:3,1,0	1/1:19,1:18:17:137,17,0	1/1:23,0:21:26.72:278,27,0	0/1:34,0:29:7.79:190,0,8	1/1:18,1:19:41.39:402,41,0	1/1:32,0:31:68.68:598,69,0	1/1:22,0:18:24.41:236,24,0	1/1:22,0:22:47.03:438,47,0	0/0:21,0:20:28.06:0,28,289	1/1:23,0:23:41.97:377,42,0	1/1:32,2:33:59.65:553,60,0	1/1:21,0:21:47.69:474,48,0	1/1:22,3:24:47.92:495,48,0	1/1:35,0:32:86.60:857,87,0	1/1:11,0:9:23.87:198,24,0	1/1:34,1:32:43.84:418,44,0	1/1:23,0:21:35.98:322,36,0	0/0:19,0:17:38.85:0,39,302	0/0:37,0:36:28.40:0,28,354	0/0:37,0:34:70.95:0,71,501	1/1:26,0:25:26.97:276,27,0	1/1:28,2:29:61.69:599,62,0	1/1:16,2:18:36:368,36,0	1/1:3,0:3:9:87,9,0
chr10	63765842	.	GAC	G	2864.30	PASS	AB=0.803;AC=25;AF=0.481;AN=52;BaseQRankSum=3.219;DP=601;FS=20.533;HRun=0;HaplotypeScore=154.3372;InbreedingCoeff=-0.5119;MQ=48.36;MQ0=18;MQRankSum=-2.468;QD=5.76;ReadPosRankSum=-5.725;VQSLOD=0.2325;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:22,3:23:19.41:203,19,0	1/1:2,2:4:5.81:55,6,0	./.	./.	1/1:24,0:20:1.25:3,1,0	0/1:12,6:17:17.99:18,0,129	0/1:21,3:22:99:145,0,164	0/1:26,10:32:80.95:593,0,81	0/1:17,4:22:99:132,0,228	0/1:22,5:27:99:174,0,281	0/1:14,5:17:99:110,0,118	0/1:14,5:19:99:163,0,269	0/0:21,0:21:37.96:0,38,869	0/1:17,5:24:55.06:55,0,343	0/1:29,4:34:99:103,0,428	0/1:14,6:20:99:181,0,312	0/1:18,5:23:99:111,0,285	0/1:20,12:31:99:377,0,375	0/1:12,1:10:56.90:57,0,141	0/1:22,5:29:99:155,0,147	0/1:20,3:22:58.54:59,0,264	0/0:17,0:15:42.42:0,42,603	0/0:30,0:30:32:0,32,713	0/0:36,0:34:54.24:0,54,1113	0/1:20,2:25:61.58:62,0,186	0/1:18,6:25:99:134,0,299	0/1:14,4:19:99:102,0,214	0/1:2,1:3:30.12:30,0,59
chr10	63765864	.	C	CAGAG	4622.12	PASS	AC=38;AF=0.760;AN=50;BaseQRankSum=1.919;DP=568;FS=7.715;HRun=0;HaplotypeScore=151.9094;InbreedingCoeff=0.9584;MQ=49.16;MQ0=13;MQRankSum=-1.308;QD=11.16;ReadPosRankSum=-0.142;VQSLOD=3.6033;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:24:32.62:0,33,366	0/0:4,0:4:6.01:0,6,77	./.	./.	./.	1/1:18,0:17:23.59:162,24,0	1/1:20,0:18:16.50:93,17,0	1/1:29,0:26:70.67:637,71,0	1/1:22,0:22:47.19:329,47,0	1/1:22,0:22:41.59:256,42,0	1/1:16,0:16:23.64:164,24,0	1/1:18,0:18:21.23:129,21,0	0/0:25,0:25:68.61:0,69,1053	1/1:22,0:22:27:105,27,0	1/1:29,0:29:33.87:216,34,0	1/1:23,0:23:45.24:279,45,0	1/1:18,0:18:35.84:222,36,0	1/1:29,0:27:50.07:288,50,0	1/1:20,0:16:40.14:315,40,0	1/1:22,0:22:33.15:210,33,0	1/1:28,0:28:55.24:361,55,0	0/0:18,0:18:48.07:0,48,749	0/0:26,0:26:48.12:0,48,795	0/0:40,0:39:99:0,102,1426	1/1:19,0:19:17.53:90,18,0	1/1:27,0:25:53.20:370,53,0	1/1:26,0:26:48.75:340,49,0	1/1:5,0:5:8.69:55,9,0
chr10	63766520	.	A	AGT	5211.21	PASS	AB=0.700;AC=26;AF=0.500;AN=52;BaseQRankSum=-5.741;DP=552;FS=1.106;HRun=0;HaplotypeScore=80.1713;InbreedingCoeff=0.0881;MQ=62.97;MQ0=12;MQRankSum=1.537;QD=14.56;ReadPosRankSum=-0.415;VQSLOD=4.3875;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:26:20.96:0,21,397	0/0:6,0:6:9.02:0,9,100	./.	./.	0/0:10,0:28:12.31:0,12,58	0/1:9,6:16:42.96:229,0,43	1/1:12,1:12:12.04:178,12,0	1/1:19,0:19:14.47:85,14,0	0/1:5,10:15:3.41:380,0,3	0/1:20,9:30:24.53:443,0,25	0/1:9,5:14:21.48:124,0,21	1/1:8,7:15:18.06:273,18,0	0/0:17,0:18:23.90:0,24,248	1/1:7,6:13:12.04:182,12,0	0/1:5,2:7:27.99:39,0,28	1/1:4,5:10:15.05:227,15,0	0/1:13,21:36:6.82:759,0,7	1/1:8,8:16:21.07:319,21,0	0/1:12,6:19:34.80:244,0,35	1/1:11,17:28:39.13:592,39,0	0/1:8,14:25:13.72:419,0,14	0/0:12,0:12:26.91:0,27,264	0/0:17,0:16:23.59:0,24,220	0/0:22,0:31:48.07:0,48,580	0/1:6,4:10:27.50:40,0,27	0/1:14,6:19:29.76:185,0,30	0/1:16,13:28:99:364,0,125	0/1:13,6:19:49.73:129,0,50
chr10	63767675	.	G	GCT	1150.96	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=-5.542;DP=502;FS=8.083;HRun=0;HaplotypeScore=62.2939;InbreedingCoeff=0.7099;MQ=100.64;MQ0=0;MQRankSum=-3.047;QD=25.58;ReadPosRankSum=-0.589;VQSLOD=3.9080;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,26:31:69.24:1155,69,0	1/1:0,3:3:6.02:100,6,0	0/0:29,1:29:48.51:0,49,729	0/0:31,0:31:32.66:0,33,391	0/0:11,0:11:24.08:0,24,305	0/0:13,0:13:36.11:0,36,457	0/0:21,0:21:54.17:0,54,688	0/0:29,0:29:69.21:0,69,867	0/0:19,0:19:54.17:0,54,687	0/0:23,0:23:60.19:0,60,760	0/0:5,0:5:15.05:0,15,190	0/0:10,0:10:24.08:0,24,304	0/0:9,0:9:24.08:0,24,306	0/0:16,0:16:45.14:0,45,572	0/0:16,0:16:39.11:0,39,483	0/0:20,0:20:54.17:0,54,687	0/0:37,0:37:99:0,102,1282	0/0:15,0:15:39.12:0,39,496	0/0:21,0:21:48.13:0,48,587	0/0:7,0:7:21.07:0,21,267	0/0:33,0:33:84.27:0,84,1069	0/0:15,0:15:39.12:0,39,497	0/0:8,0:8:19.31:0,19,264	0/0:20,0:20:57.18:0,57,725	0/0:15,0:15:42.11:0,42,519	0/0:26,0:26:72.23:0,72,917	0/1:11,0:11:15.83:16,0,314	0/0:5,0:5:12.04:0,12,153
chr10	63769605	.	TA	T	451.67	PASS	AB=0.695;AC=2;AF=0.036;AN=56;BaseQRankSum=9.297;DP=1407;FS=18.941;HRun=1;HaplotypeScore=651.5933;InbreedingCoeff=-0.0453;MQ=36.76;MQ0=16;MQRankSum=-8.725;QD=7.92;ReadPosRankSum=-12.354;VQSLOD=0.0101;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:18,18:36:92.69:309,0,93	0/1:13,8:21:99:232,0,209	0/0:71,0:26:78.24:0,78,1199	0/0:55,0:31:90.09:0,90,1316	0/0:49,0:49:25.05:0,25,289	0/0:34,0:34:16.31:0,16,308	0/0:44,0:44:23.46:0,23,441	0/0:73,0:60:99:0,168,2578	0/0:56,0:56:32.66:0,33,653	0/0:80,0:78:99:0,209,2999	0/0:43,0:43:9.25:0,9,272	0/0:46,0:45:6.08:0,6,226	0/0:42,0:42:42.21:0,42,721	0/0:54,0:54:13.11:0,13,365	0/0:59,0:59:30.04:0,30,437	0/0:54,0:53:31.75:0,32,553	0/0:23,0:22:41.17:0,41,546	0/0:24,0:24:54.18:0,54,861	0/0:27,0:26:68.72:0,69,1060	0/0:56,0:56:99:0,101,1448	0/0:117,0:114:99:0,116,1953	0/0:87,0:87:66.99:0,67,793	0/0:56,0:56:19.78:0,20,458	0/0:38,0:38:27.08:0,27,446	0/0:43,0:43:14.99:0,15,386	0/0:71,0:71:99:0,202,3025	0/0:38,0:38:56.26:0,56,928	0/0:10,0:10:30.01:0,30,413
chr10	63769653	.	T	TGAA	1137.86	PASS	AB=0.942;AC=11;AF=0.196;AN=56;BaseQRankSum=9.319;DP=1174;FS=24.514;HRun=0;HaplotypeScore=460.4108;InbreedingCoeff=-0.2468;MQ=36.38;MQ0=36;MQRankSum=-7.466;QD=2.58;ReadPosRankSum=0.760;VQSLOD=0.0560;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:43:39.68:0,40,798	0/1:15,0:16:43.16:43,0,408	0/0:61,0:15:45.08:0,45,730	0/0:63,0:18:45.21:0,45,749	0/1:14,9:23:99:410,0,237	0/0:37,0:34:32.42:0,32,485	0/0:45,0:46:28.20:0,28,482	0/0:58,0:52:99:0,153,2269	0/0:48,0:47:31.47:0,31,532	0/1:69,1:70:99:450,0,1875	0/1:22,2:24:34.62:35,0,419	0/1:42,0:40:14.18:14,0,266	0/1:36,1:37:14.59:15,0,500	0/0:40,0:40:21.07:0,21,371	0/1:48,1:49:40.23:40,0,441	0/0:41,0:41:25.43:0,25,403	0/0:30,0:27:53.06:0,53,901	0/0:21,0:20:50.55:0,51,657	0/0:28,0:25:74.03:0,74,1058	0/1:28,1:27:24.70:25,0,650	0/0:91,0:90:71.29:0,71,1160	0/1:63,3:67:99:180,0,840	0/0:41,1:44:14.37:0,14,792	0/0:43,0:43:71.76:0,72,1169	0/0:27,1:28:37.36:0,37,340	0/1:52,1:53:35.35:35,0,1925	0/1:29,2:31:38.79:39,0,652	0/0:7,0:6:9.03:0,9,151
chr10	63770132	.	T	TATTC	13041.95	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-11.881;DP=585;FS=7.439;HRun=0;HaplotypeScore=86.2124;InbreedingCoeff=0.9386;MQ=58.81;MQ0=1;MQRankSum=1.410;QD=32.28;ReadPosRankSum=1.144;VQSLOD=4.1609;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:23:13.56:0,14,113	0/0:1,0:8:17.76:0,18,152	0/0:13,0:10:6.02:0,6,87	0/0:14,0:7:2.98:0,3,22	0/0:10,0:27:48.05:0,48,445	1/1:7,13:20:30.10:711,30,0	1/1:6,8:14:15.05:355,15,0	0/0:19,0:30:26.97:0,27,235	1/1:6,10:16:18.06:426,18,0	1/1:14,15:29:48.16:1133,48,0	1/1:10,14:24:39.09:851,39,0	1/1:9,13:22:33.11:780,33,0	0/0:21,0:21:45.14:0,45,683	1/1:9,10:20:27.09:636,27,0	1/1:11,17:29:45.15:1046,45,0	1/1:8,19:27:36.12:853,36,0	1/1:12,17:29:42.10:928,42,0	1/1:10,7:17:12.04:284,12,0	1/1:15,8:20:24.08:568,24,0	1/1:10,12:22:33.11:782,33,0	1/1:4,14:18:33.11:782,33,0	0/0:16,0:16:18.04:0,18,259	0/0:16,0:16:30.10:0,30,469	0/0:13,0:13:21.07:0,21,329	1/1:6,9:16:21.03:446,21,0	1/1:16,20:36:63.22:1461,63,0	1/1:10,17:27:19.21:646,19,0	1/1:7,7:14:15.05:355,15,0
chr10	63770378	.	AC	A	2401.68	PASS	AB=1.000;AC=53;AF=0.946;AN=56;BaseQRankSum=-3.816;DP=278;FS=11.198;HRun=4;HaplotypeScore=45.6180;InbreedingCoeff=0.2365;MQ=62.85;MQ0=24;MQRankSum=-4.238;QD=10.44;ReadPosRankSum=-0.637;VQSLOD=0.0686;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,2:13:20.44:155,20,0	1/1:2,0:2:5.94:45,6,0	0/0:46,0:10:6.67:0,7,71	0/1:37,0:8:18.04:18,0,20	1/1:7,0:7:10.96:76,11,0	1/1:6,0:6:11.81:83,12,0	1/1:3,0:2:5.88:36,6,0	1/1:8,1:8:17.86:126,18,0	1/1:9,0:9:18.03:111,18,0	1/1:15,0:14:32.81:249,33,0	1/1:6,0:5:6:55,6,0	1/1:5,0:5:13.52:104,14,0	1/1:4,0:4:2.91:18,3,0	1/1:3,0:3:8.91:64,9,0	1/1:5,0:5:11.83:80,12,0	1/1:6,1:7:11.76:79,12,0	1/1:9,0:8:17.89:113,18,0	1/1:5,1:5:8.87:61,9,0	1/1:17,0:16:31.88:230,32,0	1/1:2,0:2:6:53,6,0	1/1:8,1:8:18.38:145,18,0	1/1:5,0:5:6:52,6,0	1/1:6,1:7:17.02:105,17,0	1/1:4,1:4:3:29,3,0	1/1:15,2:17:23.97:154,24,0	1/1:10,0:9:22.98:160,23,0	1/1:7,1:7:9.36:65,9,0	1/1:2,0:2:5.96:45,6,0
chr10	63770744	.	A	AACAC	6927.26	PASS	AB=0.700;AC=41;AF=0.732;AN=56;BaseQRankSum=-3.916;DP=395;FS=13.648;HRun=0;HaplotypeScore=63.7353;InbreedingCoeff=0.4716;MQ=63.93;MQ0=15;MQRankSum=-0.919;QD=23.89;ReadPosRankSum=0.801;VQSLOD=3.4076;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:12,0:17:6.02:104,6,0	1/1:0,1:5:9.03:176,9,0	0/0:27,0:15:3.01:0,3,48	0/0:29,0:16:2.02:0,2,40	1/1:10,0:9:2.98:21,3,0	1/1:6,2:11:11.51:165,12,0	1/1:6,6:11:6.02:144,6,0	1/1:20,0:17:23.97:275,24,0	1/1:1,3:4:9.03:215,9,0	1/1:6,2:9:8.77:156,9,0	1/1:6,5:11:9.03:215,9,0	1/1:5,5:11:20.33:356,20,0	0/0:13,0:13:11.53:0,12,322	1/1:5,4:9:12.04:287,12,0	1/1:3,9:14:29.57:598,30,0	1/1:3,6:9:15.05:359,15,0	0/1:11,25:39:45.16:1308,0,45	1/1:6,8:14:21.07:502,21,0	1/1:12,4:16:14.77:252,15,0	1/1:7,2:8:9.03:179,9,0	0/1:10,2:8:72.87:200,0,73	0/0:1,0:1:3.01:0,3,48	0/0:11,0:13:18.04:0,18,238	0/0:18,0:20:8.48:0,8,203	1/1:5,2:10:8.77:156,9,0	1/1:11,4:16:19.83:360,20,0	0/1:8,8:17:65.95:423,0,66	1/1:2,6:9:21.02:476,21,0
chr10	63770850	.	AAC	A	819.82	PASS	AB=0.913;AC=30;AF=0.625;AN=48;BaseQRankSum=1.092;DP=141;FS=4.802;HRun=0;HaplotypeScore=23.9867;InbreedingCoeff=0.3454;MQ=67.07;MQ0=11;MQRankSum=1.143;QD=13.66;ReadPosRankSum=1.349;VQSLOD=2.7331;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:11:14.67:0,15,165	./.	./.	0/0:19,0:6:0:0,0,0	0/0:7,0:8:8.92:0,9,59	1/1:0,3:3:6.02:67,6,0	0/1:3,0:3:3.96:28,0,4	0/0:8,0:8:20.62:0,21,214	1/1:0,2:2:6.02:67,6,0	1/1:1,2:2:6.02:66,6,0	1/1:1,2:2:6.02:66,6,0	0/0:1,0:5:6.47:0,6,53	0/0:10,0:10:18.02:0,18,227	1/1:0,1:1:3.01:33,3,0	1/1:0,2:2:6.02:67,6,0	1/1:0,1:1:3.01:33,3,0	1/1:2,5:7:15.04:166,15,0	1/1:0,1:1:3.01:33,3,0	1/1:2,1:2:2.31:32,2,0	./.	./.	0/1:6,1:7:21.23:21,0,123	0/1:7,1:8:18.24:18,0,145	0/1:7,0:8:5.22:5,0,48	1/1:0,1:1:3.01:33,3,0	1/1:0,2:2:6.02:67,6,0	1/1:0,5:5:15.04:166,15,0	0/0:1,0:1:0:0,0,0
chr10	63771090	.	A	AT	1961.59	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-1.366;DP=500;FS=2.011;HRun=9;HaplotypeScore=50.5083;InbreedingCoeff=0.9365;MQ=65.49;MQ0=0;MQRankSum=-1.071;QD=18.51;ReadPosRankSum=-2.559;VQSLOD=2.9158;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,1:31:68.35:360,68,0	1/1:2,0:7:11.40:57,11,0	0/0:9,0:6:5.19:0,5,72	0/0:11,0:11:13.46:0,13,173	1/1:2,22:24:60.12:650,60,0	0/0:25,0:25:61.54:0,62,525	0/0:13,0:13:15.40:0,15,276	1/1:11,33:44:96.24:1052,96,0	0/0:19,0:19:47.96:0,48,413	0/0:19,0:19:53.98:0,54,467	0/0:17,0:17:50.97:0,51,439	0/0:16,0:16:47.99:0,48,417	0/0:17,0:17:14.61:0,15,285	0/0:6,0:6:18:0,18,156	0/0:21,0:21:50.89:0,51,433	0/0:10,0:11:29.03:0,29,240	0/0:28,2:30:17.75:0,18,611	0/0:14,0:14:38.99:0,39,338	0/0:22,0:22:50.97:0,51,438	0/0:19,0:19:47.97:0,48,416	0/0:10,0:10:26.99:0,27,234	0/0:11,0:11:32.99:0,33,286	0/0:20,0:20:50.97:0,51,439	0/0:13,0:13:32.98:0,33,286	0/0:8,0:8:20.99:0,21,182	0/0:28,0:28:74.95:0,75,649	0/0:23,0:23:56.95:0,57,490	0/0:12,0:12:32.99:0,33,287
chr10	63773818	.	CTGTGTG	C	2784.84	PASS	AB=0.871;AC=33;AF=0.611;AN=54;BaseQRankSum=3.748;DP=633;FS=6.660;HRun=0;HaplotypeScore=139.5314;InbreedingCoeff=0.7159;MQ=67.48;MQ0=12;MQRankSum=-5.480;QD=7.80;ReadPosRankSum=3.407;VQSLOD=2.1687;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:53:33.11:0,33,890	0/0:3,0:3:3.01:0,3,73	0/0:40,0:22:6.02:0,6,88	0/0:52,0:26:3.01:0,3,43	0/0:19,0:19:17.12:0,17,193	1/1:15,2:19:11.95:143,12,0	1/1:15,5:20:14.90:181,15,0	0/0:28,0:27:13.49:0,13,181	1/1:9,5:15:12.04:224,12,0	1/1:21,1:22:3.01:61,3,0	1/1:12,3:15:2.04:6,2,0	1/1:8,5:16:21.07:368,21,0	0/0:16,0:19:15.04:0,15,338	1/1:9,2:15:8.99:105,9,0	1/1:13,9:23:14.92:181,15,0	1/1:12,8:22:23.97:349,24,0	0/1:23,3:27:26.08:126,0,26	1/1:15,1:17:6.02:103,6,0	1/1:20,0:19:5.78:56,6,0	1/1:14,6:22:11.87:80,12,0	1/1:27,0:28:6:76,6,0	0/0:14,0:14:15.05:0,15,449	0/0:17,0:17:21.07:0,21,646	0/0:25,0:28:33.10:0,33,791	1/1:11,11:23:23.90:269,24,0	1/1:21,11:32:30.66:411,31,0	1/1:14,7:20:12.04:243,12,0	./.
chr10	63774538	.	CTA	C	141.57	PASS	AB=0.989;AC=16;AF=0.286;AN=56;BaseQRankSum=7.856;DP=450;FS=35.328;HRun=0;HaplotypeScore=80.1192;InbreedingCoeff=-0.1881;MQ=66.76;MQ0=8;MQRankSum=-0.320;QD=0.61;ReadPosRankSum=8.021;VQSLOD=-0.3894;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:26:56.93:0,57,660	0/0:9,0:9:18.88:0,19,179	0/0:18,0:13:14.92:0,15,317	0/0:13,0:11:26.94:0,27,287	0/0:21,0:20:30.79:0,31,448	0/1:10,0:9:10.16:10,0,29	0/0:15,0:15:18.39:0,18,199	0/0:32,0:31:80.68:0,81,953	0/1:17,0:16:17.71:18,0,51	0/1:18,0:18:1.95:2,0,131	0/1:18,0:18:8.80:9,0,113	1/1:10,1:11:5.74:59,6,0	0/0:11,0:11:23.90:0,24,284	0/0:9,0:9:5.77:0,6,47	0/1:16,1:17:3.97:4,0,105	0/1:14,0:13:9.57:10,0,66	0/1:19,0:19:32.69:33,0,41	0/1:17,1:18:27.07:27,0,86	0/1:21,1:22:40.28:40,0,117	0/1:12,0:12:13.74:14,0,35	0/1:14,0:14:6.96:7,0,64	0/0:9,0:8:24.03:0,24,291	0/0:16,0:15:38.25:0,38,446	0/0:18,0:17:33.22:0,33,373	0/0:20,0:21:6.11:0,6,133	0/1:15,0:15:5:5,0,136	0/1:13,0:13:21.21:36,0,21	0/1:13,0:12:6.66:18,0,7
chr10	63774540	.	ATT	A	3197.29	PASS	AB=0.692;AC=34;AF=0.607;AN=56;BaseQRankSum=0.520;DP=462;FS=1.456;HRun=15;HaplotypeScore=71.1069;InbreedingCoeff=0.7077;MQ=63.98;MQ0=13;MQRankSum=2.949;QD=11.18;ReadPosRankSum=6.539;VQSLOD=2.4408;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:30:61.34:0,61,571	0/1:9,0:10:2.82:3,0,123	0/0:18,0:13:7.85:0,8,141	0/0:11,0:9:8.61:0,9,82	0/0:18,1:22:26.80:0,27,448	1/1:3,7:9:17.88:158,18,0	1/1:10,4:15:5.73:97,6,0	0/0:30,0:30:62.51:0,63,706	1/1:4,13:16:16.65:248,17,0	1/1:4,9:16:18.17:204,18,0	0/1:7,9:19:5.42:178,0,5	1/1:2,8:11:26.11:205,26,0	0/0:13,0:14:38.17:0,38,332	0/1:2,3:8:0.71:44,0,1	1/1:7,8:16:17.75:158,18,0	1/1:6,7:12:23.43:182,23,0	1/1:3,13:19:32.40:261,32,0	1/1:9,11:19:24.81:234,25,0	1/1:11,8:22:4.88:187,5,0	0/1:4,8:14:16.41:179,0,16	1/1:4,8:12:14.92:132,15,0	0/0:9,0:8:15.01:0,15,182	0/0:14,0:14:18.06:0,18,241	0/0:21,0:20:29.38:0,29,277	1/1:10,11:21:26.55:282,27,0	1/1:7,7:16:12.19:180,12,0	1/1:1,10:12:23.78:255,24,0	1/1:2,9:12:20.55:214,21,0
chr10	63775696	.	CT	C	718.62	PASS	AB=0.909;AC=5;AF=0.089;AN=56;BaseQRankSum=7.746;DP=663;FS=4.865;HRun=11;HaplotypeScore=83.0337;InbreedingCoeff=0.6977;MQ=64.04;MQ0=0;MQRankSum=-0.649;QD=11.41;ReadPosRankSum=1.115;VQSLOD=3.4743;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,27:33:73.93:597,74,0	1/1:0,9:10:29.01:228,29,0	0/1:18,1:13:23.03:23,0,140	0/0:14,0:12:7.93:0,8,52	0/0:32,0:35:75.01:0,75,775	0/0:22,1:25:44.19:0,44,637	0/0:20,2:22:10.86:0,11,527	0/0:28,0:31:55.97:0,56,593	0/0:23,2:25:29.45:0,29,497	0/0:34,3:38:19.12:0,19,788	0/0:19,0:19:48.11:0,48,504	0/0:18,1:20:19.61:0,20,435	0/0:19,0:21:47.95:0,48,494	0/0:22,0:22:57.08:0,57,582	0/0:19,1:21:29.49:0,29,519	0/0:19,1:20:26.44:0,26,475	0/0:29,0:30:81.03:0,81,838	0/0:26,0:26:51.11:0,51,535	0/0:21,0:22:50.96:0,51,526	0/0:26,0:27:75.02:0,75,782	0/0:10,0:10:27.06:0,27,282	0/0:21,1:22:35.48:0,35,569	0/0:16,1:17:20.44:0,20,407	0/0:25,1:27:46.69:0,47,731	0/0:37,0:40:88.10:0,88,871	0/0:30,1:31:44.52:0,45,672	0/0:21,2:23:4.81:0,5,442	0/0:12,0:12:33.08:0,33,352
chr10	63776487	.	CT	C	2748.43	PASS	AB=0.709;AC=36;AF=0.643;AN=56;BaseQRankSum=2.764;DP=560;FS=0.000;HRun=15;HaplotypeScore=64.5273;InbreedingCoeff=0.2175;MQ=73.10;MQ0=8;MQRankSum=1.446;QD=6.05;ReadPosRankSum=4.387;VQSLOD=2.4574;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:16,27:45:38.32:345,38,0	1/1:6,5:11:14.73:96,15,0	0/0:27,0:13:13.91:0,14,95	0/1:23,0:13:11.50:11,0,30	1/1:5,10:17:21.61:154,22,0	0/1:13,3:19:6.63:115,0,7	0/1:6,14:20:25.28:88,0,25	0/1:18,15:31:45.42:88,0,45	1/1:5,13:19:22.69:140,23,0	1/1:5,8:14:25.61:158,26,0	0/1:10,7:18:36.06:47,0,36	0/1:8,7:16:23.94:24,0,79	0/0:14,0:14:17.94:0,18,147	1/1:3,9:12:9.76:103,10,0	0/1:12,14:27:4.95:177,0,5	0/1:7,11:18:15.42:124,0,15	1/1:8,23:31:28.79:300,29,0	0/1:9,11:20:28.20:141,0,28	0/1:9,4:12:36.03:37,0,36	1/1:7,11:17:16.74:104,17,0	1/1:1,11:13:28.61:177,29,0	0/0:20,0:20:39.44:0,39,335	0/0:23,1:25:21.75:0,22,274	0/0:18,2:19:20.43:0,20,271	1/1:3,3:5:5.85:38,6,0	1/1:8,19:31:46.59:336,47,0	1/1:11,4:15:8.70:57,9,0	1/1:11,1:12:13.73:76,14,0
chr10	63777970	.	G	GCTCTCTCTCTCT	5270.27	PASS	AB=1.000;AC=42;AF=0.750;AN=56;BaseQRankSum=0.405;DP=552;FS=3.055;HRun=0;HaplotypeScore=152.3745;InbreedingCoeff=0.5413;MQ=63.90;MQ0=28;MQRankSum=-4.534;QD=10.71;ReadPosRankSum=-0.405;VQSLOD=3.6873;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:36,0:33:3:25,3,0	0/0:10,0:11:2.68:0,3,225	0/1:61,0:20:8.77:9,0,25	0/1:85,0:21:0:0,0,0	1/1:11,0:10:6.02:104,6,0	1/1:17,0:13:3:25,3,0	1/1:10,0:9:8.99:76,9,0	1/1:26,0:24:16.86:258,17,0	1/1:18,0:18:9.92:267,10,0	1/1:25,0:24:36.37:932,36,0	1/1:13,0:13:5.94:115,6,0	0/1:10,0:7:0:0,0,0	0/1:9,0:9:0.97:1,0,157	1/1:11,0:8:12.01:172,12,0	1/1:10,8:19:3.01:172,3,0	0/0:3,6:9:0:0,0,0	1/1:5,12:23:6.02:207,6,0	1/1:7,1:13:9.50:439,10,0	1/1:12,0:10:11.99:212,12,0	1/1:14,0:13:14.91:317,15,0	1/1:15,0:15:18.04:387,18,0	0/0:17,0:17:12.07:0,12,511	0/0:6,0:7:18.04:0,18,416	0/0:14,0:14:15.03:0,15,331	1/1:14,0:14:15.04:367,15,0	1/1:15,0:13:21.02:400,21,0	1/1:17,0:12:11.99:173,12,0	1/1:15,0:15:33.01:612,33,0
chr10	63777993	.	CTCTCTCTT	C	173.26	PASS	AB=1.000;AC=3;AF=0.056;AN=54;BaseQRankSum=-0.610;DP=565;FS=6.121;HRun=0;HaplotypeScore=108.4663;InbreedingCoeff=0.5346;MQ=43.53;MQ0=40;MQRankSum=-1.457;QD=1.30;ReadPosRankSum=-0.184;VQSLOD=1.6637;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	1/1:4,6:10:14.97:261,15,0	0/0:80,0:12:22.13:0,22,182	0/1:123,0:14:1.80:2,0,169	0/0:12,0:11:8.57:0,9,109	0/0:15,0:11:14.73:0,15,102	0/0:13,0:12:19.17:0,19,144	0/0:24,0:22:38.66:0,39,634	0/0:13,0:13:20.73:0,21,340	0/0:18,0:17:30.04:0,30,750	0/0:10,0:10:14.83:0,15,160	0/0:11,0:8:14.96:0,15,215	0/0:8,0:8:14.89:0,15,300	0/0:10,0:7:8.85:0,9,130	0/0:14,0:13:8.97:0,9,96	0/0:11,0:9:5.76:0,6,65	0/0:22,0:21:14.97:0,15,144	0/0:14,0:10:15.05:0,15,343	0/0:12,0:9:18.01:0,18,271	0/0:12,0:11:20.51:0,21,325	0/0:15,0:14:21.01:0,21,343	0/0:11,0:10:24.06:0,24,580	0/0:8,0:8:17.23:0,17,584	0/0:11,0:11:16.96:0,17,481	0/0:19,0:18:26.67:0,27,339	0/0:11,0:9:21.07:0,21,425	0/0:16,0:11:23.96:0,24,294	0/0:14,0:13:32.86:0,33,528
chr10	63778008	.	TTC	T	610.89	PASS	AB=0.966;AC=18;AF=0.321;AN=56;BaseQRankSum=3.097;DP=499;FS=21.309;HRun=0;HaplotypeScore=75.2529;InbreedingCoeff=-0.3852;MQ=44.43;MQ0=41;MQRankSum=-0.748;QD=2.84;ReadPosRankSum=0.727;VQSLOD=0.2362;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:26:0.47:1,0,0	0/1:10,0:10:15.58:16,0,85	0/0:78,0:8:9.60:0,10,243	0/0:110,0:14:27.20:0,27,232	0/1:10,0:9:47.93:48,0,102	0/0:12,0:9:11.85:0,12,131	0/0:10,0:8:13.56:0,14,112	0/0:13,1:12:3.99:0,4,559	0/1:11,1:12:34.46:34,0,334	0/1:12,1:12:99:104,0,210	0/1:8,2:10:38.41:38,0,105	0/0:13,0:10:23.11:0,23,381	0/0:8,0:7:12:0,12,243	0/1:10,0:8:32.20:32,0,137	0/1:8,0:7:26.51:27,0,87	0/0:10,0:8:11.69:0,12,169	0/1:16,0:15:8.49:8,0,241	0/1:11,0:7:20.17:20,0,196	0/1:10,0:7:3.27:3,0,190	0/1:9,1:10:44.54:45,0,80	0/1:10,0:11:84.42:84,0,98	0/0:10,0:9:17.95:0,18,279	0/0:9,0:9:21.03:0,21,425	0/0:7,1:8:10.97:0,11,241	0/1:13,1:13:93.69:94,0,205	0/1:12,0:8:59.47:65,0,59	0/1:14,0:10:22.08:22,0,375	0/1:11,1:10:38.71:121,0,39
chr10	63778702	.	GA	G	114.83	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.183;DP=553;FS=0.977;HRun=10;HaplotypeScore=60.9988;InbreedingCoeff=0.8917;MQ=64.65;MQ0=1;MQRankSum=1.119;QD=12.76;ReadPosRankSum=-0.910;VQSLOD=3.1917;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:67.97:0,68,872	0/0:5,0:5:14.99:0,15,138	0/0:13,0:8:11.99:0,12,120	0/0:15,0:14:20.93:0,21,184	0/0:18,1:19:9.13:0,9,386	0/0:16,1:17:22.04:0,22,458	0/0:22,0:22:60.15:0,60,656	0/0:31,0:31:84.14:0,84,889	0/0:15,0:14:39:0,39,402	0/0:27,0:27:63.17:0,63,691	0/0:13,0:13:33.09:0,33,365	0/0:19,0:19:48.11:0,48,520	0/0:20,1:21:22.09:0,22,457	0/0:21,1:22:28.11:0,28,511	0/0:27,0:27:66.14:0,66,716	0/0:21,0:21:54.06:0,54,564	0/0:30,1:31:75.14:0,75,806	0/0:18,0:18:38.02:0,38,424	0/0:21,0:22:62.99:0,63,667	0/0:16,0:16:42.11:0,42,457	0/0:21,0:21:57.15:0,57,631	1/1:1,8:9:23.99:208,24,0	0/0:7,0:8:23.89:0,24,239	0/0:26,1:27:43.17:0,43,687	0/0:12,0:12:36.10:0,36,398	0/0:30,0:30:84.22:0,84,923	0/0:23,0:23:51.13:0,51,556	0/0:11,0:11:30.07:0,30,322
chr10	63778872	.	TTA	T	6678.36	PASS	AB=0.659;AC=43;AF=0.827;AN=52;BaseQRankSum=4.403;DP=433;FS=0.000;HRun=0;HaplotypeScore=54.8978;InbreedingCoeff=0.6238;MQ=27.42;MQ0=43;MQRankSum=-2.448;QD=16.86;ReadPosRankSum=0.339;VQSLOD=4.5678;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:18,9:15:15.05:196,15,0	1/1:2,1:2:3.01:39,3,0	./.	./.	1/1:4,10:13:24.04:296,24,0	1/1:12,9:14:24.08:315,24,0	1/1:3,5:6:12.04:157,12,0	1/1:13,17:24:2.74:619,3,0	1/1:7,6:8:15.05:197,15,0	1/1:8,19:21:45.15:591,45,0	1/1:8,10:14:17.74:221,18,0	1/1:3,3:4:6.02:79,6,0	0/0:11,0:10:15.05:0,15,257	1/1:9,10:15:20.94:274,21,0	1/1:5,9:13:21.07:276,21,0	1/1:5,12:16:36.12:472,36,0	1/1:13,8:16:24.08:315,24,0	1/1:14,3:10:12.02:142,12,0	1/1:14,11:19:33.10:421,33,0	1/1:9,16:22:39.08:491,39,0	1/1:3,2:1:3:25,3,0	0/0:7,0:7:6.02:0,6,103	0/0:9,0:8:18.06:0,18,276	0/0:7,0:6:6.02:0,6,102	1/1:7,14:16:30.10:394,30,0	0/1:13,14:22:54.70:504,0,55	1/1:8,16:22:45.13:576,45,0	1/1:9,5:10:6.02:79,6,0
chr10	63778899	.	T	TA	3066.34	PASS	AB=0.777;AC=34;AF=0.630;AN=54;BaseQRankSum=-0.012;DP=505;FS=2.413;HRun=14;HaplotypeScore=82.0852;InbreedingCoeff=0.3945;MQ=40.84;MQ0=23;MQRankSum=-2.849;QD=7.10;ReadPosRankSum=-0.638;VQSLOD=2.7681;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:13:5.78:0,6,15	0/0:7,0:6:4:0,4,10	0/0:6,0:2:2.95:0,3,19	./.	1/1:10,18:27:6.20:249,6,0	0/1:17,5:19:38.59:104,0,39	0/1:4,4:8:4.31:83,0,4	1/1:30,10:38:19.52:268,20,0	1/1:12,4:13:11.95:99,12,0	1/1:16,12:24:17.94:144,18,0	1/1:13,13:22:32.89:268,33,0	1/1:5,1:4:6:53,6,0	0/0:12,0:12:11.71:0,12,75	0/1:19,0:16:10.34:29,0,10	1/1:9,7:15:20.95:177,21,0	1/1:7,13:20:29.95:256,30,0	0/1:14,8:21:1.24:114,0,1	0/1:15,3:14:4.43:79,0,4	1/1:17,4:16:4.20:132,4,0	1/1:16,16:30:47.87:401,48,0	1/1:4,2:3:6:53,6,0	0/0:10,0:10:6.92:0,7,51	0/0:9,0:9:17.63:0,18,113	0/0:3,0:2:2.94:0,3,19	0/1:11,9:18:17.52:111,0,18	1/1:22,2:19:13.64:94,14,0	1/1:13,16:28:41.29:349,41,0	1/1:10,8:15:21.31:174,21,0
chr10	63778912	.	AAC	A	272.03	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=0.264;DP=445;FS=10.393;HRun=0;HaplotypeScore=76.9696;InbreedingCoeff=0.7966;MQ=55.35;MQ0=15;MQRankSum=-0.589;QD=11.83;ReadPosRankSum=-0.322;VQSLOD=2.5417;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:10,7:15:26.83:254,27,0	1/1:1,5:6:11.98:134,12,0	0/0:8,0:6:17.83:0,18,155	0/0:4,0:2:2.99:0,3,23	0/0:27,0:27:42.10:0,42,510	0/0:18,0:18:36.09:0,36,455	0/0:8,0:8:15.02:0,15,164	0/0:34,0:33:63.14:0,63,722	0/0:12,0:12:15.03:0,15,160	0/0:25,0:22:33.06:0,33,352	0/0:25,0:23:36.03:0,36,390	0/0:8,0:7:15:0,15,145	0/0:13,0:12:20.91:0,21,244	0/0:14,0:14:9.01:0,9,111	0/0:14,0:13:23.99:0,24,245	0/0:17,0:17:33.05:0,33,350	0/0:18,0:18:35.96:0,36,384	0/0:14,0:13:27.02:0,27,309	0/0:22,0:18:42.08:0,42,471	0/0:31,0:31:58.92:0,59,630	0/0:7,0:7:21:0,21,199	0/0:8,0:8:9.03:0,9,143	0/0:11,0:11:30.03:0,30,369	0/0:4,0:4:8.99:0,9,94	0/0:18,0:16:21.06:0,21,265	0/0:16,0:14:18.02:0,18,186	0/0:29,0:28:60.05:0,60,641	0/0:17,0:13:26.90:0,27,266
chr10	63779693	.	TTCTCTCTCTCTCTC	T	6850.80	PASS	AB=0.785;AC=34;AF=0.630;AN=54;BaseQRankSum=7.132;DP=553;FS=21.803;HRun=0;HaplotypeScore=196.0578;InbreedingCoeff=0.7337;MQ=59.93;MQ0=14;MQRankSum=-4.963;QD=20.45;ReadPosRankSum=1.803;VQSLOD=1.8245;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:38.74:0,39,1483	0/0:7,0:8:7.27:0,7,218	0/0:23,0:12:9.03:0,9,123	./.	0/0:23,0:24:12.51:0,13,470	1/1:14,6:19:12.04:382,12,0	0/1:19,6:26:87.90:277,0,88	0/0:25,0:25:15.53:0,16,351	1/1:14,11:26:23.90:855,24,0	1/1:16,5:20:11.47:298,11,0	1/1:12,5:17:14.69:318,15,0	1/1:8,3:12:9.03:275,9,0	0/0:11,0:11:16.61:0,17,474	1/1:8,5:13:6.02:177,6,0	1/1:9,8:17:12.04:469,12,0	1/1:6,2:9:11.99:266,12,0	1/1:17,7:24:9.03:294,9,0	0/1:13,5:17:5.26:225,0,5	1/1:20,3:24:10.27:447,10,0	1/1:16,8:25:18.03:471,18,0	1/1:19,0:18:6.02:86,6,0	0/0:17,0:17:18.05:0,18,506	0/0:17,0:17:18.06:0,18,555	0/0:18,0:18:20.60:0,21,687	1/1:5,6:13:12.04:373,12,0	1/1:8,3:10:8.24:241,8,0	1/1:13,10:23:29.86:947,30,0	1/1:12,0:14:18.05:452,18,0
chr10	63779956	.	C	CAACAAACA	28544.95	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-4.270;DP=601;FS=0.000;HRun=0;HaplotypeScore=123.6619;InbreedingCoeff=0.9393;MQ=48.26;MQ0=5;MQRankSum=-10.111;QD=58.37;ReadPosRankSum=-5.005;VQSLOD=3.5131;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,22:38:63.22:2366,63,0	1/1:4,7:11:27.09:1109,27,0	0/0:16,0:10:5.11:0,5,116	0/0:12,0:8:6.02:0,6,153	1/1:13,17:31:36.08:1152,36,0	1/1:9,11:21:36.11:1340,36,0	1/1:12,17:31:51.18:2057,51,0	1/1:20,0:20:32.24:751,32,0	1/1:6,9:15:27.09:1098,27,0	1/1:10,18:29:54.65:1781,55,0	1/1:9,9:21:39.09:1133,39,0	1/1:6,11:18:30.03:1139,30,0	0/0:11,0:11:21.07:0,21,539	1/1:11,10:23:27.09:1108,27,0	1/1:9,16:27:48.15:1892,48,0	1/1:11,13:24:42.14:1733,42,0	1/1:10,6:18:14.85:623,15,0	1/1:8,5:16:15.05:541,15,0	1/1:9,9:20:39.13:1148,39,0	1/1:14,11:27:48.10:1736,48,0	1/1:10,6:18:15.01:506,15,0	0/0:22,0:22:42.14:0,42,958	0/0:15,0:15:33.11:0,33,846	0/0:36,0:35:87.30:0,87,2132	1/1:9,8:18:33.08:1141,33,0	1/1:15,11:27:54.16:1795,54,0	1/1:11,10:24:42.14:1648,42,0	1/1:0,6:8:18.06:748,18,0
chr10	63780356	.	G	GT	375.17	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.672;DP=558;FS=18.483;HRun=0;HaplotypeScore=69.4420;InbreedingCoeff=0.9976;MQ=91.04;MQ0=0;MQRankSum=-6.890;QD=15.01;ReadPosRankSum=-0.445;VQSLOD=3.4373;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,17:18:44.21:320,44,0	1/1:1,6:7:20.91:176,21,0	0/0:27,0:27:76.81:0,77,1051	0/0:22,0:21:55.99:0,56,746	0/0:17,0:17:45.15:0,45,620	0/0:25,0:25:75.23:0,75,1031	0/0:19,0:19:54.16:0,54,734	0/0:23,0:23:66.22:0,66,923	0/0:11,0:11:33.11:0,33,462	0/0:22,0:22:63.21:0,63,881	0/0:22,0:22:63.21:0,63,878	0/0:17,0:17:51.17:0,51,713	0/0:13,0:13:39.13:0,39,545	0/0:17,0:17:51.15:0,51,694	0/0:15,0:15:45.15:0,45,629	0/0:16,0:16:45.13:0,45,596	0/0:48,0:48:99:0,141,1951	0/0:21,0:21:63.21:0,63,881	0/0:22,0:23:42.28:0,42,894	0/0:24,0:24:72.21:0,72,968	0/0:28,0:28:84.28:0,84,1172	0/0:17,0:17:51.17:0,51,713	0/0:17,0:17:48.16:0,48,671	0/0:18,0:18:54.18:0,54,755	0/0:15,0:15:45.15:0,45,624	0/0:20,0:20:60.20:0,60,831	0/0:17,0:17:51.17:0,51,713	0/0:19,0:19:51.13:0,51,689
chr10	63780362	.	TCC	T	467.89	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.532;DP=544;FS=17.238;HRun=2;HaplotypeScore=76.4206;InbreedingCoeff=0.9955;MQ=89.90;MQ0=0;MQRankSum=-7.455;QD=20.34;ReadPosRankSum=1.424;VQSLOD=0.2916;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,17:17:42.03:404,42,0	1/1:0,6:6:18.04:184,18,0	0/0:25,0:25:74.69:0,75,1355	0/0:20,0:19:54.08:0,54,1027	0/0:19,0:19:54.19:0,54,1097	0/0:26,0:26:78.25:0,78,1538	0/0:19,0:19:57.20:0,57,1142	0/0:25,0:25:72.25:0,72,1440	0/0:10,0:10:30.10:0,30,600	0/0:24,0:24:69.24:0,69,1383	0/0:21,0:21:60.21:0,60,1183	0/0:17,0:17:51.18:0,51,1031	0/0:14,0:14:42.14:0,42,831	0/0:16,0:16:48.16:0,48,975	0/0:14,0:14:42.14:0,42,844	0/0:15,0:15:45.15:0,45,905	0/0:46,0:46:99:0,138,2792	0/0:20,0:20:60.21:0,60,1218	0/0:24,0:24:72.24:0,72,1431	0/0:23,0:23:63.22:0,63,1262	0/0:25,0:25:75.24:0,75,1488	0/0:16,0:16:48.16:0,48,953	0/0:17,0:17:48.16:0,48,975	0/0:16,0:16:48.16:0,48,965	0/0:15,0:15:45.15:0,45,902	0/0:20,0:20:60.21:0,60,1202	0/0:18,0:18:54.19:0,54,1096	0/0:16,0:16:48.15:0,48,939
chr10	63780656	.	CA	C	7941.88	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=4.773;DP=366;FS=7.746;HRun=3;HaplotypeScore=52.8084;InbreedingCoeff=0.9420;MQ=86.75;MQ0=0;MQRankSum=-6.987;QD=31.77;ReadPosRankSum=-1.847;VQSLOD=3.8796;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,16:16:36.11:446,36,0	1/1:0,9:9:24.08:297,24,0	0/0:19,0:18:26.94:0,27,570	0/0:20,0:19:9.93:0,10,483	1/1:0,8:8:21.07:260,21,0	1/1:2,13:15:36.11:435,36,0	1/1:4,16:20:48.15:586,48,0	1/1:1,22:23:63.18:766,63,0	1/1:0,14:14:36.11:442,36,0	1/1:1,8:9:21.07:259,21,0	1/1:0,6:6:18.06:218,18,0	1/1:0,8:8:24.08:297,24,0	0/0:13,0:13:39.11:0,39,541	1/1:1,14:15:42.13:518,42,0	1/1:0,14:14:39.12:480,39,0	1/1:4,8:12:27.08:332,27,0	1/1:1,10:11:26.68:334,27,0	1/1:1,10:11:33.10:407,33,0	1/1:0,8:8:24.06:283,24,0	1/1:1,1:2:3.01:34,3,0	1/1:5,7:12:24.07:297,24,0	0/0:12,0:12:33.11:0,33,475	0/0:11,0:11:27.09:0,27,389	0/0:40,0:40:99:0,114,1634	1/1:0,6:6:12.04:148,12,0	1/1:0,9:9:27.08:324,27,0	1/1:0,16:16:45.14:556,45,0	1/1:0,6:6:18.06:223,18,0
chr10	63780669	.	G	GCC	3706.90	PASS	AB=0.846;AC=41;AF=0.732;AN=56;BaseQRankSum=4.731;DP=369;FS=3.307;HRun=10;HaplotypeScore=85.8803;InbreedingCoeff=0.7868;MQ=74.69;MQ0=0;MQRankSum=-5.263;QD=15.58;ReadPosRankSum=-2.939;VQSLOD=1.8262;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:18:13.52:69,14,0	1/1:4,0:7:6.24:20,6,0	0/0:19,0:16:14.09:0,14,114	0/0:16,0:13:15.82:0,16,149	0/1:9,0:11:5.81:6,0,66	1/1:7,2:10:8.85:83,9,0	1/1:11,5:17:39.77:411,40,0	0/0:21,0:22:50.80:0,51,478	1/1:8,6:15:31.11:361,31,0	1/1:8,2:11:12.03:155,12,0	1/1:4,2:7:8.52:97,9,0	1/1:4,2:7:9.01:109,9,0	0/0:10,0:11:32.81:0,33,316	1/1:10,3:15:23.25:280,23,0	1/1:9,4:15:4.90:332,5,0	1/1:6,3:12:28.48:293,28,0	1/1:10,2:14:14:158,14,0	1/1:6,3:12:15.55:228,16,0	1/1:8,3:12:17.02:178,17,0	1/1:0,2:2:6.02:90,6,0	1/1:8,5:15:14.51:166,15,0	0/0:13,0:13:30.01:0,30,293	0/0:9,0:10:26.51:0,27,237	0/0:40,0:40:86.86:0,87,865	1/1:6,1:7:3.90:47,4,0	1/1:5,3:9:14.64:171,15,0	1/1:9,7:17:29.57:381,30,0	1/1:5,0:5:8.98:73,9,0
chr10	63781371	.	G	GGAA	2730.98	PASS	AB=1.000;AC=22;AF=0.393;AN=56;BaseQRankSum=-13.155;DP=715;FS=1.157;HRun=0;HaplotypeScore=142.1597;InbreedingCoeff=-0.3202;MQ=75.45;MQ0=2;MQRankSum=-1.103;QD=5.38;ReadPosRankSum=-10.137;VQSLOD=0.1455;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:2,32:35:66.18:1407,66,0	1/1:0,9:9:15:283,15,0	0/0:45,0:36:55.95:0,56,994	0/0:43,0:34:78.63:0,79,892	0/1:15,0:15:15.79:16,0,140	0/1:23,0:23:11.86:12,0,308	0/1:32,0:32:78.57:79,0,294	0/1:32,0:32:97.72:375,0,98	0/1:26,0:26:26.05:26,0,321	0/1:29,0:29:12.12:12,0,269	0/1:11,0:11:49.19:49,0,100	0/0:17,0:17:50:0,50,313	0/0:20,0:20:60.15:0,60,857	0/1:29,0:29:74:74,0,311	0/1:29,0:29:26.79:27,0,333	0/1:19,0:19:13.03:13,0,228	0/1:41,0:41:99:145,0,417	0/1:29,0:29:62.41:62,0,306	0/1:27,0:27:99:145,0,201	0/0:16,0:16:20.18:0,20,276	0/1:47,0:47:79.17:79,0,485	0/0:11,0:11:30.08:0,30,434	0/0:14,0:14:42.09:0,42,580	0/0:40,0:40:99:0,114,1680	0/1:17,0:17:33.66:34,0,146	0/1:24,0:24:26.55:27,0,225	0/1:26,0:26:34.48:34,0,286	0/1:8,0:8:1.98:2,0,92
chr10	63782122	.	GA	G	489.66	PASS	AB=0.800;AC=31;AF=0.596;AN=52;BaseQRankSum=-4.343;DP=230;FS=4.008;HRun=14;HaplotypeScore=32.7108;InbreedingCoeff=0.4735;MQ=57.95;MQ0=33;MQRankSum=1.172;QD=4.90;ReadPosRankSum=2.211;VQSLOD=0.6695;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:16:15.30:0,15,121	0/0:1,0:1:2.98:0,3,21	0/0:34,0:7:6.37:0,6,97	0/0:44,0:17:18.29:0,18,116	0/0:12,0:13:11.63:0,12,51	1/1:2,2:2:5.95:41,6,0	1/1:0,4:4:2.98:21,3,0	0/0:6,0:3:0.47:0,0,1	1/1:5,0:1:2.84:14,3,0	1/1:3,3:4:11.89:82,12,0	1/1:6,0:5:5.89:36,6,0	0/0:3,0:1:2.84:0,3,14	./.	0/1:3,1:2:14.30:14,0,15	1/1:4,1:4:5.91:41,6,0	1/1:0,2:2:2.97:20,3,0	1/1:14,4:17:7.67:95,8,0	1/1:8,4:10:17.35:112,17,0	1/1:10,0:4:2.95:19,3,0	1/1:1,2:3:2.97:20,3,0	./.	0/0:2,0:1:3:0,3,27	0/0:3,0:3:9.01:0,9,83	0/0:4,0:2:3:0,3,27	1/1:5,0:4:2.90:18,3,0	1/1:5,0:3:8.92:62,9,0	1/1:5,0:5:3.34:37,3,0	1/1:5,0:4:1.56:18,2,0
chr10	63784723	.	GCT	G	999.27	PASS	AB=0.933;AC=34;AF=0.773;AN=44;BaseQRankSum=-1.026;DP=431;FS=2.406;HRun=0;HaplotypeScore=53.4911;InbreedingCoeff=0.3927;MQ=69.93;MQ0=25;MQRankSum=0.224;QD=3.69;ReadPosRankSum=-0.285;VQSLOD=1.9648;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:21:2.55:3,0,114	./.	./.	0/0:49,0:21:0:0,0,0	./.	1/1:11,0:11:11.53:91,12,0	1/1:16,0:16:14.91:113,15,0	./.	1/1:9,0:9:5.98:47,6,0	1/1:14,0:14:10.44:71,10,0	0/1:9,0:8:9.89:10,0,18	./.	1/1:8,0:7:8.95:67,9,0	0/0:9,0:8:0:0,0,0	1/1:14,0:14:15.20:104,15,0	0/1:5,0:5:0:0,0,0	1/1:20,0:20:13.73:108,14,0	0/0:11,0:11:15.44:0,15,123	1/1:21,0:19:5.96:45,6,0	./.	1/1:22,0:21:11.90:85,12,0	1/1:12,0:11:8.96:68,9,0	0/1:7,3:11:0:0,0,0	1/1:15,0:14:11.93:89,12,0	1/1:12,0:12:2.97:20,3,0	1/1:10,7:16:17.88:136,18,0	1/1:13,0:12:5.82:34,6,0	1/1:17,0:14:2.97:20,3,0
chr10	63784772	.	CTGTG	C	895.73	PASS	AB=1.000;AC=29;AF=0.580;AN=50;BaseQRankSum=-1.501;DP=421;FS=16.102;HRun=0;HaplotypeScore=76.9495;InbreedingCoeff=0.3168;MQ=42.62;MQ0=38;MQRankSum=3.122;QD=3.41;ReadPosRankSum=0.840;VQSLOD=0.3642;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:23:27.08:324,27,0	1/1:2,0:3:3.01:36,3,0	./.	./.	./.	1/1:16,0:15:5.06:87,5,0	0/0:29,0:24:0.32:0,0,38	0/0:20,0:20:6.01:0,6,63	0/0:9,0:7:0.47:0,0,1	1/1:17,0:12:1.73:14,2,0	0/0:10,0:8:3.48:0,3,49	1/1:25,0:24:1.69:7,2,0	0/0:12,0:10:7.27:0,7,98	1/1:12,0:9:4.57:54,5,0	1/1:15,0:14:2.60:47,3,0	0/1:11,0:11:6.15:44,0,6	1/1:23,0:20:3.10:43,3,0	0/0:15,0:13:3.58:0,4,33	1/1:11,2:12:8.68:82,9,0	1/1:4,4:8:2.74:12,3,0	0/1:28,0:26:31.67:32,0,39	0/0:18,0:18:9.03:0,9,134	0/0:12,0:11:3.01:0,3,46	0/0:25,0:22:27.06:0,27,368	1/1:11,0:10:9.23:70,9,0	1/1:24,0:20:4.65:46,5,0	1/1:12,0:11:0.23:80,0,0	0/1:19,0:13:5.84:63,0,6
chr10	63785258	.	GGAGA	G	516.51	PASS	AB=0.911;AC=6;AF=0.107;AN=56;BaseQRankSum=6.067;DP=877;FS=1.694;HRun=0;HaplotypeScore=157.8413;InbreedingCoeff=0.6337;MQ=63.83;MQ0=7;MQRankSum=1.263;QD=5.11;ReadPosRankSum=0.977;VQSLOD=2.6473;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:11,11:22:17.41:294,17,0	1/1:1,7:9:21.03:321,21,0	0/0:32,0:18:16.52:0,17,306	0/0:44,0:29:9.14:0,9,385	0/0:31,0:33:50.73:0,51,1144	0/0:28,0:28:60.68:0,61,1421	0/0:34,0:34:59.82:0,60,1256	0/0:36,0:36:65.96:0,66,1392	0/0:36,0:39:99:0,105,2232	0/0:49,1:52:54.64:0,55,2107	0/0:16,0:16:38.85:0,39,792	0/0:24,0:26:62.67:0,63,1334	0/0:34,0:34:79.82:0,80,1827	0/0:31,0:31:71.94:0,72,1622	0/1:45,3:48:27.08:27,0,2448	0/0:42,0:42:43.15:0,43,2066	0/0:16,0:16:41.73:0,42,973	0/0:17,0:17:36.04:0,36,782	0/0:23,0:20:42.13:0,42,911	0/0:26,0:27:59.91:0,60,1285	0/0:45,0:48:99:0,103,2167	0/0:33,0:34:87.20:0,87,1750	0/1:19,1:22:5.29:5,0,828	0/0:23,0:23:56.91:0,57,1272	0/0:22,0:22:44.89:0,45,1006	0/0:52,1:55:59.70:0,60,2293	0/0:45,0:46:99:0,120,2599	0/0:16,0:16:45.08:0,45,955
chr10	63785314	.	CAT	C	1019.89	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.255;DP=984;FS=21.429;HRun=0;HaplotypeScore=143.7776;InbreedingCoeff=0.9994;MQ=67.46;MQ0=2;MQRankSum=-2.125;QD=25.50;ReadPosRankSum=0.593;VQSLOD=2.8209;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,28:28:45.15:732,45,0	1/1:1,10:11:27.05:409,27,0	0/0:38,0:31:86.41:0,86,1618	0/0:45,0:41:99:0,107,1642	0/0:33,0:33:89.88:0,90,1785	0/0:35,0:35:99:0,105,2036	0/0:40,0:40:99:0,103,2145	0/0:47,0:47:99:0,141,2741	0/0:45,0:45:99:0,132,2500	0/0:48,0:48:99:0,144,2890	0/0:15,0:15:45.15:0,45,902	0/0:31,0:31:87.19:0,87,1661	0/0:43,0:43:99:0,126,2543	0/0:31,0:31:93.25:0,93,1808	0/0:44,0:44:99:0,123,2478	0/0:40,0:40:99:0,120,2363	0/0:33,0:33:85.23:0,85,1644	0/0:21,0:22:55.74:0,56,1208	0/0:26,0:26:78.26:0,78,1542	0/0:31,0:31:87.28:0,87,1718	0/0:79,0:79:99:0,232,4627	0/0:35,0:35:99:0,105,2093	0/0:26,0:26:78.24:0,78,1543	0/0:31,0:31:84.14:0,84,1655	0/0:20,0:20:57.18:0,57,1084	0/0:44,0:44:99:0,129,2510	0/0:47,0:46:99:0,134,2528	0/0:15,0:15:45.11:0,45,849
chr10	63787111	.	TGGTTC	T	108.01	PASS	AB=0.913;AC=3;AF=0.188;AN=16;BaseQRankSum=2.044;DP=185;FS=35.288;HRun=0;HaplotypeScore=9.6033;MQ=20.56;MQ0=117;MQRankSum=-0.027;QD=2.77;ReadPosRankSum=-0.876;VQSLOD=0.2298;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:3,0:1:3.01:0,3,63	./.	0/0:9,0:5:3.25:0,3,104	./.	./.	0/1:11,6:13:99:145,0,305	./.	0/1:9,0:1:0:0,0,0	./.	./.	0/0:5,0:2:5.23:0,5,52	./.	./.	./.	./.	./.	./.	./.	./.	./.	0/0:7,0:2:3.01:0,3,58	0/1:13,0:10:35.58:36,0,210	./.	0/0:6,0:1:3.01:0,3,78	./.	./.
chr10	63787238	.	AT	A	173.90	PASS	AB=0.929;AC=4;AF=0.077;AN=52;BaseQRankSum=3.720;DP=181;FS=8.960;HRun=8;HaplotypeScore=28.7828;InbreedingCoeff=0.2841;MQ=83.88;MQ0=0;MQRankSum=0.049;QD=6.44;ReadPosRankSum=-0.975;VQSLOD=-0.4893;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,4:9:27.04:261,27,0	./.	0/1:12,0:12:0.95:1,0,109	0/1:5,1:6:14.52:15,0,70	0/0:11,0:11:33.10:0,33,399	0/0:5,0:5:15.05:0,15,181	0/0:5,0:5:15.05:0,15,181	0/0:14,1:14:10.14:0,10,405	0/0:3,0:3:9.03:0,9,109	0/0:5,0:5:15.05:0,15,181	0/0:6,0:6:18.06:0,18,217	0/0:3,0:3:9.03:0,9,109	0/0:1,0:1:3.01:0,3,36	0/0:3,0:4:11.90:0,12,123	0/0:6,0:6:18.06:0,18,217	0/0:5,0:5:14.98:0,15,163	0/0:12,0:12:36.11:0,36,435	0/0:19,0:19:51.16:0,51,616	0/0:18,0:18:39.11:0,39,461	0/0:3,0:3:6.02:0,6,72	0/0:4,0:4:3.01:0,3,36	0/0:1,0:1:3.01:0,3,36	./.	0/0:6,0:6:15.05:0,15,181	0/0:4,0:4:12.04:0,12,145	0/0:2,0:2:6.02:0,6,72	0/0:8,0:8:24.07:0,24,290	0/0:8,0:8:24.07:0,24,290
chr10	63787632	.	C	CTG	1187.59	PASS	AB=1.000;AC=21;AF=0.420;AN=50;BaseQRankSum=-0.709;DP=413;FS=2.883;HRun=0;HaplotypeScore=77.4938;InbreedingCoeff=0.0165;MQ=43.01;MQ0=41;MQRankSum=-0.381;QD=5.40;ReadPosRankSum=2.330;VQSLOD=2.7809;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:8,0:3:5.98:0,6,48	0/0:12,0:7:7.65:0,8,72	0/0:22,0:20:9.89:0,10,74	0/0:10,0:9:2.21:0,2,16	1/1:17,0:14:14.78:125,15,0	0/0:20,0:16:30.49:0,30,217	1/1:12,0:10:8.99:74,9,0	0/1:17,0:12:44.71:118,0,45	./.	0/1:11,0:11:14.18:62,0,14	0/0:10,0:9:14.13:0,14,119	1/1:10,0:10:11.98:99,12,0	1/1:14,0:13:5.97:45,6,0	0/1:19,0:17:26.67:51,0,27	0/1:9,0:5:9.95:54,0,10	0/1:10,0:7:9.16:9,0,33	0/1:25,0:22:47.42:301,0,47	0/1:6,0:5:15.32:34,0,15	1/1:9,0:6:5.99:48,6,0	0/0:22,0:18:17.40:0,17,222	0/0:11,0:8:15.02:0,15,171	0/0:44,0:41:42.55:0,43,334	0/1:14,0:11:18.94:42,0,19	0/1:22,0:21:99:136,0,206	0/1:18,0:18:35.60:104,0,36	0/1:7,0:5:7.08:49,0,7
chr10	63787654	.	CTG	C	1072.29	PASS	AB=1.000;AC=35;AF=0.729;AN=48;BaseQRankSum=-1.217;DP=416;FS=4.822;HRun=0;HaplotypeScore=85.1506;InbreedingCoeff=0.3917;MQ=37.58;MQ0=45;MQRankSum=2.261;QD=3.62;ReadPosRankSum=-2.083;VQSLOD=1.7615;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:29:2.99:0,3,24	./.	./.	./.	0/0:22,0:20:10.81:0,11,61	1/1:13,0:12:8.92:65,9,0	1/1:18,0:15:14.94:117,15,0	0/0:17,0:12:8.72:0,9,50	./.	0/1:17,0:12:13.07:15,0,13	1/1:11,0:9:8.98:73,9,0	1/1:13,0:13:5.94:42,6,0	0/1:9,0:8:9.87:10,0,31	1/1:8,0:8:2.99:24,3,0	1/1:16,0:15:5.98:48,6,0	1/1:18,0:16:14.89:108,15,0	1/1:11,0:6:5.95:42,6,0	0/1:10,0:7:39.35:39,0,50	1/1:17,5:17:14.80:109,15,0	1/1:8,0:5:3.46:25,3,0	1/1:11,0:8:11.95:93,12,0	0/0:23,0:18:5.99:0,6,48	0/0:14,0:11:8.91:0,9,66	1/1:46,0:43:6.64:141,7,0	1/1:12,0:9:2.97:20,3,0	1/1:27,0:26:21.67:158,22,0	1/1:20,0:20:11.52:73,12,0	1/1:6,0:4:2.93:22,3,0
chr10	63787940	.	G	GA	274.66	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=3.259;DP=469;FS=5.460;HRun=0;HaplotypeScore=48.0456;InbreedingCoeff=0.8534;MQ=60.01;MQ0=2;MQRankSum=-3.408;QD=15.26;ReadPosRankSum=-2.156;VQSLOD=4.0720;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,17:17:21.07:334,21,0	1/1:0,1:1:3.01:48,3,0	0/0:5,0:3:8.99:0,9,104	0/0:10,0:7:20.71:0,21,228	0/0:20,0:19:54.18:0,54,751	0/0:9,0:9:27.09:0,27,377	0/0:27,0:26:75.07:0,75,959	0/0:17,0:17:47.96:0,48,555	0/0:18,0:18:54.17:0,54,738	0/0:15,0:15:45.15:0,45,626	0/0:11,0:11:33.11:0,33,461	0/0:12,0:11:33.11:0,33,461	0/0:12,0:12:33.11:0,33,457	0/0:27,0:27:81.27:0,81,1132	0/0:15,0:15:42.14:0,42,583	0/0:18,0:18:54.14:0,54,733	0/0:31,0:31:93.31:0,93,1298	0/0:24,0:24:66.19:0,66,902	0/0:16,0:15:42.10:0,42,556	0/0:15,0:15:45.11:0,45,607	0/0:32,0:32:93.29:0,93,1267	0/0:21,0:21:50.94:0,51,707	0/0:15,0:14:42.10:0,42,553	0/0:19,0:19:51.13:0,51,691	0/0:13,0:12:33.11:0,33,460	0/0:26,0:26:78.24:0,78,1058	0/0:19,0:19:54.18:0,54,754	0/0:4,0:4:12.04:0,12,168
chr10	63789193	.	G	GA	1262.80	PASS	AB=0.813;AC=30;AF=0.536;AN=56;BaseQRankSum=-3.029;DP=489;FS=8.297;HRun=16;HaplotypeScore=71.7857;InbreedingCoeff=-0.0949;MQ=67.87;MQ0=9;MQRankSum=1.745;QD=3.19;ReadPosRankSum=-0.790;VQSLOD=-0.3784;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:5.02:0,5,52	0/0:6,0:6:6.42:0,6,20	0/1:49,0:15:5.83:12,0,6	0/1:47,0:21:3.66:4,0,37	0/1:17,4:21:29.79:65,0,30	0/1:5,6:12:18.66:47,0,19	0/1:3,7:11:8.07:58,0,8	0/0:20,0:39:18.58:0,19,81	0/1:3,1:5:0.82:19,0,1	1/1:8,10:18:24.77:183,25,0	0/1:7,6:14:20.90:36,0,21	1/1:4,5:9:8.98:72,9,0	0/1:5,0:6:12.53:13,0,28	0/1:6,9:17:10.88:37,0,11	0/1:3,4:7:7.78:39,0,8	0/1:6,1:7:18.58:53,0,19	1/1:25,2:27:18.19:202,18,0	1/1:10,13:23:0.95:92,1,0	0/1:16,0:16:14.06:14,0,76	1/1:8,6:14:8.93:66,9,0	0/1:4,4:9:9.93:39,0,10	0/1:1,0:1:0:0,0,0	0/0:4,0:5:1.88:0,2,6	0/0:10,0:12:10.33:0,10,55	1/1:7,14:22:14.81:110,15,0	0/1:18,5:22:34.10:100,0,34	0/1:11,5:15:4.81:56,0,5	1/1:15,1:18:16.29:106,16,0
chr10	63789550	.	GA	G	2224.38	PASS	AB=0.795;AC=35;AF=0.625;AN=56;BaseQRankSum=-2.635;DP=472;FS=2.907;HRun=15;HaplotypeScore=61.3355;InbreedingCoeff=0.6793;MQ=51.13;MQ0=13;MQRankSum=1.031;QD=7.27;ReadPosRankSum=4.565;VQSLOD=2.8223;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,3:43:69.29:0,69,287	0/0:5,0:5:10.85:0,11,46	0/0:11,0:7:14.55:0,15,102	0/0:12,0:3:0.99:0,1,5	0/0:15,1:28:17.14:0,17,189	1/1:6,8:16:23.79:143,24,0	1/1:4,17:26:57.44:337,57,0	0/0:25,1:27:22.53:0,23,286	1/1:6,9:16:27.65:165,28,0	1/1:7,10:20:11.25:170,11,0	1/1:7,7:15:12.61:81,13,0	1/1:3,12:19:37.15:214,37,0	0/0:8,0:8:11.99:0,12,103	1/1:5,5:10:8.85:57,9,0	1/1:8,8:16:19.69:121,20,0	0/1:4,10:15:3.64:98,0,4	1/1:3,19:22:56.14:365,56,0	1/1:4,10:14:23.59:154,24,0	1/1:6,7:16:10.35:113,10,0	0/1:13,0:14:17.10:17,0,19	1/1:7,9:17:16.63:102,17,0	0/0:15,2:17:3.54:0,4,263	0/0:15,0:15:28.56:0,29,220	0/1:6,1:7:7.27:7,0,67	1/1:4,11:16:21.75:127,22,0	1/1:10,2:13:7.65:44,8,0	1/1:14,3:19:12.52:68,13,0	1/1:8,4:8:5.86:38,6,0
chr10	63789560	.	A	AG	539.71	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.340;DP=518;FS=5.375;HRun=0;HaplotypeScore=70.9898;InbreedingCoeff=0.9174;MQ=55.78;MQ0=10;MQRankSum=-0.546;QD=9.81;ReadPosRankSum=4.032;VQSLOD=3.3870;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,40:51:32.91:579,33,0	1/1:0,4:4:11.82:77,12,0	0/0:11,0:7:10.60:0,11,157	0/0:12,0:5:11.51:0,12,102	0/0:31,0:31:55.46:0,55,474	0/0:21,0:21:53.72:0,54,415	0/0:29,0:29:83.51:0,84,623	0/0:29,0:29:73.75:0,74,693	0/0:18,0:18:47.81:0,48,375	0/0:20,0:19:56.76:0,57,461	0/0:12,0:12:26.78:0,27,194	0/0:20,0:20:56.61:0,57,416	0/0:12,0:12:32.97:0,33,325	0/0:11,0:11:17.89:0,18,138	0/0:16,0:15:35.84:0,36,276	0/0:14,0:14:32.87:0,33,271	0/0:24,0:24:68.69:0,69,524	0/0:14,0:14:26.64:0,27,202	0/0:18,0:18:47.84:0,48,384	0/0:15,0:15:44.85:0,45,379	0/0:19,0:19:44.81:0,45,349	0/0:18,0:18:48.04:0,48,547	0/0:15,0:15:42.45:0,42,462	0/0:7,0:7:12.02:0,12,147	0/0:17,0:17:35.84:0,36,277	0/0:19,0:19:44.76:0,45,377	0/0:29,0:29:61.26:0,61,473	0/0:12,0:8:14.94:0,15,116
chr10	63789882	.	ATCT	A	1631.31	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.471;DP=553;FS=12.596;HRun=0;HaplotypeScore=79.5843;InbreedingCoeff=0.9806;MQ=84.60;MQ0=0;MQRankSum=-1.127;QD=36.25;ReadPosRankSum=2.164;VQSLOD=3.5555;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,38:40:93.32:1548,93,0	1/1:0,5:5:12.04:200,12,0	0/0:17,0:17:48.01:0,48,997	0/0:23,0:23:39.70:0,40,1330	0/0:23,0:23:60.16:0,60,1291	0/0:17,0:17:51.17:0,51,1131	0/0:24,0:24:66.23:0,66,1496	0/0:27,0:27:69.24:0,69,1563	0/0:21,0:21:63.21:0,63,1386	0/0:22,0:22:66.22:0,66,1457	0/0:9,0:9:21.05:0,21,390	0/0:15,0:15:42.14:0,42,951	0/0:19,0:19:57.19:0,57,1224	0/0:18,0:18:51.17:0,51,1132	0/0:17,0:17:51.18:0,51,1156	0/0:11,0:11:33.10:0,33,707	0/0:32,0:32:96.33:0,96,2171	0/0:23,0:23:69.24:0,69,1549	0/0:25,0:25:57.20:0,57,1292	0/0:20,0:20:57.20:0,57,1250	0/0:22,0:22:63.22:0,63,1403	0/0:16,0:16:42.14:0,42,951	0/0:17,0:17:51.17:0,51,1130	0/0:22,0:22:66.23:0,66,1495	0/0:11,0:11:24.08:0,24,544	0/0:21,0:21:63.18:0,63,1355	0/0:22,0:22:66.23:0,66,1488	0/0:14,0:14:42.14:0,42,929
chr10	63790188	.	TACAC	T	2486.35	PASS	AB=0.890;AC=33;AF=0.635;AN=52;BaseQRankSum=3.187;DP=441;FS=6.014;HRun=0;HaplotypeScore=76.5523;InbreedingCoeff=0.6084;MQ=70.75;MQ0=11;MQRankSum=-1.596;QD=10.40;ReadPosRankSum=2.336;VQSLOD=1.4142;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:37:21.07:0,21,374	0/0:6,0:6:9.03:0,9,190	./.	./.	0/0:16,0:16:12.01:0,12,190	1/1:13,3:16:9.03:133,9,0	0/1:20,0:21:24.52:181,0,25	0/0:20,0:18:6.02:0,6,126	1/1:6,4:10:9.03:140,9,0	1/1:8,1:11:8.38:83,8,0	1/1:2,4:6:6.02:94,6,0	1/1:6,4:10:12.04:187,12,0	0/0:10,0:10:15.03:0,15,285	1/1:5,3:9:8.72:121,9,0	1/1:10,0:19:11.77:111,12,0	1/1:8,5:13:15.05:234,15,0	1/1:12,13:27:26.88:403,27,0	1/1:7,4:10:9.03:140,9,0	0/1:13,1:15:5.60:42,0,6	1/1:6,5:13:15.04:196,15,0	0/1:16,4:20:38.23:181,0,38	0/0:10,0:10:18.05:0,18,328	0/0:15,0:15:18.04:0,18,355	0/0:19,0:21:47.88:0,48,1003	1/1:7,5:13:9.02:122,9,0	1/1:6,4:10:10.83:120,11,0	1/1:9,4:12:9.03:140,9,0	1/1:0,1:1:3.01:47,3,0
chr10	63790877	.	A	AT	972.48	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-6.391;DP=551;FS=0.714;HRun=7;HaplotypeScore=55.3302;InbreedingCoeff=0.9597;MQ=75.61;MQ0=0;MQRankSum=-1.854;QD=25.59;ReadPosRankSum=1.550;VQSLOD=4.2506;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,31:35:81.25:978,81,0	1/1:0,3:3:9.03:108,9,0	0/0:12,0:13:30.03:0,30,285	0/0:11,0:11:20.92:0,21,184	0/0:32,0:32:93.11:0,93,886	0/0:14,0:14:42.07:0,42,406	0/0:11,0:11:21.01:0,21,197	0/0:24,0:24:72.11:0,72,691	0/0:18,0:18:45.07:0,45,435	0/0:25,0:25:66.10:0,66,637	0/0:20,0:21:53.11:0,53,498	0/0:8,0:8:18.03:0,18,174	0/0:16,0:16:42.06:0,42,406	0/0:11,0:11:30.05:0,30,290	0/0:20,0:20:54.07:0,54,515	0/0:15,0:15:45.06:0,45,429	0/0:34,0:34:99:0,99,956	0/0:25,0:25:69.11:0,69,666	0/0:35,0:35:87.10:0,87,832	0/0:22,0:22:60.09:0,60,579	0/0:17,0:17:42.06:0,42,405	0/0:9,0:9:27.04:0,27,261	0/0:16,0:16:39.03:0,39,366	0/0:25,0:25:72.11:0,72,695	0/0:19,0:19:54.09:0,54,522	0/0:31,0:31:84.13:0,84,811	0/0:20,0:20:60.10:0,60,579	0/0:21,0:21:48.07:0,48,463
chr10	63791888	.	A	AAAAC	349.54	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=2.763;DP=464;FS=0.981;HRun=0;HaplotypeScore=117.9104;InbreedingCoeff=0.6061;MQ=38.73;MQ0=49;MQRankSum=-1.585;QD=12.05;ReadPosRankSum=0.483;VQSLOD=3.3925;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:16,2:19:0.04:258,0,0	1/1:5,2:5:8.65:188,9,0	0/0:17,0:2:2.92:0,3,17	0/0:23,0:4:2.98:0,3,22	0/0:29,0:29:33.06:0,33,467	0/0:16,0:15:29.38:0,29,233	0/0:11,0:9:16.99:0,17,145	0/0:16,0:11:29.80:0,30,283	0/0:9,0:8:20.72:0,21,164	0/0:19,0:16:35.82:0,36,237	0/0:28,0:23:50.88:0,51,375	0/0:8,0:7:11.91:0,12,93	0/0:13,0:11:29.76:0,30,233	0/0:15,0:11:21.26:0,21,162	0/0:10,0:9:20.95:0,21,188	0/0:11,0:10:13.25:0,13,154	0/0:14,0:11:26.85:0,27,227	0/0:9,0:8:22.46:0,22,197	0/0:25,0:19:44.50:0,44,406	0/0:19,0:18:25.39:0,25,258	0/0:6,0:6:8.24:0,8,56	0/0:18,0:16:44.31:0,44,456	0/0:26,0:24:58.66:0,59,538	0/0:14,0:12:21.98:0,22,208	0/0:15,0:15:26.87:0,27,244	0/0:30,0:29:58.09:0,58,471	0/0:14,0:11:21.43:0,21,163	0/0:19,0:19:33.23:0,33,274
chr10	63791893	.	AC	A	4405.35	PASS	AB=0.940;AC=45;AF=0.804;AN=56;BaseQRankSum=3.968;DP=453;FS=1.852;HRun=1;HaplotypeScore=79.9868;InbreedingCoeff=0.1634;MQ=41.54;MQ0=44;MQRankSum=-4.833;QD=10.74;ReadPosRankSum=-0.607;VQSLOD=2.5988;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:19:14.78:91,0,15	1/1:6,1:5:11.13:58,11,0	0/1:16,3:3:0.69:16,0,1	0/0:23,1:4:2.82:0,3,15	0/1:25,1:26:22.51:23,0,112	1/1:15,1:15:41.66:310,42,0	1/1:11,0:9:7.13:119,7,0	0/1:16,0:11:16.81:61,0,17	1/1:7,1:7:20.86:155,21,0	1/1:18,0:15:38:254,38,0	1/1:28,2:26:72.52:533,73,0	1/1:7,0:6:14.16:105,14,0	0/1:12,2:12:45.46:45,0,49	1/1:14,0:11:21.53:141,22,0	1/1:6,3:8:20.92:169,21,0	1/1:12,0:11:22.22:154,22,0	1/1:13,0:11:21.22:146,21,0	1/1:7,1:7:19.26:141,19,0	1/1:22,1:17:47.12:345,47,0	1/1:15,3:17:39.99:248,40,0	1/1:5,1:6:11.86:82,12,0	0/0:19,0:17:26.54:0,27,240	0/1:24,1:23:43.87:44,0,218	0/1:10,1:11:14.43:14,0,78	1/1:15,0:15:21.50:120,21,0	1/1:31,1:31:42.59:523,43,0	1/1:13,0:10:23.49:168,23,0	1/1:14,3:17:44.73:342,45,0
chr10	63791904	.	AAC	A	2982.17	PASS	AB=1.000;AC=35;AF=0.625;AN=56;BaseQRankSum=3.264;DP=450;FS=4.400;HRun=0;HaplotypeScore=92.9545;InbreedingCoeff=0.7996;MQ=51.37;MQ0=30;MQRankSum=-2.878;QD=10.50;ReadPosRankSum=0.230;VQSLOD=3.2714;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:19:32.41:0,32,257	0/0:7,0:5:14.95:0,15,126	0/0:22,0:6:10.71:0,11,71	0/1:29,0:6:0.96:1,0,18	0/0:28,0:28:56.16:0,56,695	1/1:11,0:10:22.78:182,23,0	0/1:11,0:10:7.67:132,0,8	0/0:18,0:14:26.25:0,26,208	1/1:7,0:6:10.71:77,11,0	1/1:18,0:15:17.62:148,18,0	1/1:30,0:27:51.38:403,51,0	1/1:9,0:9:24.69:179,25,0	0/0:11,0:10:15.72:0,16,281	1/1:13,0:11:20.09:149,20,0	1/1:9,1:10:23.97:204,24,0	0/1:10,0:10:1.13:80,0,1	1/1:11,0:10:15.81:118,16,0	1/1:8,0:8:8.62:114,9,0	1/1:22,0:17:23.81:219,24,0	1/1:15,0:14:21.10:176,21,0	1/1:8,0:8:13.22:104,13,0	0/0:21,0:20:53.98:0,54,633	0/0:27,0:25:56.36:0,56,710	0/0:12,0:12:10.51:0,11,268	1/1:15,0:15:9.26:73,9,0	1/1:33,0:32:56.39:454,56,0	1/1:15,0:12:20.42:212,20,0	1/1:6,3:9:21.04:167,21,0
chr10	63791905	.	AC	A	3151.88	PASS	AB=1.000;AC=37;AF=0.661;AN=56;BaseQRankSum=3.389;DP=421;FS=0.970;HRun=1;HaplotypeScore=80.3679;InbreedingCoeff=0.7789;MQ=53.16;MQ0=29;MQRankSum=-2.627;QD=11.55;ReadPosRankSum=1.365;VQSLOD=2.0247;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:21:15.74:0,16,207	0/0:7,0:5:14.43:0,14,81	0/0:23,0:7:14.45:0,14,119	0/1:28,0:6:0.96:1,0,18	0/0:25,0:26:55.68:0,56,563	1/1:8,1:8:23.90:195,24,0	1/1:10,0:10:6.53:168,7,0	0/0:14,0:11:29.36:0,29,215	1/1:5,1:5:12.45:103,12,0	1/1:14,0:12:18.64:155,19,0	1/1:24,0:23:58.39:433,58,0	1/1:7,0:8:23.94:202,24,0	0/0:10,1:10:14.47:0,14,213	1/1:11,0:11:18.69:135,19,0	1/1:7,2:10:23.94:198,24,0	1/1:9,0:9:1.01:84,1,0	1/1:8,0:9:17.86:133,18,0	1/1:7,0:8:15.68:112,16,0	1/1:19,1:15:16.61:204,17,0	1/1:10,2:12:19.42:176,19,0	1/1:8,0:8:14.87:113,15,0	0/0:21,0:20:53.55:0,54,499	0/0:24,0:22:45.73:0,46,558	0/1:11,0:11:4.53:5,0,185	0/1:14,0:14:1.44:61,0,1	1/1:32,0:31:53.43:471,53,0	1/1:13,0:12:19.96:215,20,0	1/1:8,0:9:23.90:192,24,0
chr10	63791918	.	C	CA	488.15	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=1.890;DP=398;FS=0.000;HRun=8;HaplotypeScore=84.7731;InbreedingCoeff=0.8034;MQ=64.80;MQ0=10;MQRankSum=-3.189;QD=18.08;ReadPosRankSum=1.827;VQSLOD=3.5349;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,16:22:39.07:434,39,0	1/1:0,5:5:15.04:172,15,0	0/0:21,0:11:5.51:0,6,145	0/0:24,0:7:8.87:0,9,67	0/0:19,0:19:48.02:0,48,438	0/0:11,0:10:24.88:0,25,236	0/0:11,0:11:29.87:0,30,258	0/0:15,0:13:4.80:0,5,221	0/0:8,0:7:17.99:0,18,158	0/0:13,0:13:35.99:0,36,319	0/0:21,0:19:55.93:0,56,458	0/0:10,0:10:29.88:0,30,256	0/0:10,0:9:23.60:0,24,219	0/0:11,0:10:14.85:0,15,116	0/0:11,0:11:23.82:0,24,215	0/0:8,0:8:14.99:0,15,130	0/0:14,0:13:38.45:0,38,326	0/0:13,0:13:24.13:0,24,187	0/0:14,0:14:38.98:0,39,341	0/0:12,0:12:26.98:0,27,234	0/0:8,0:8:14.99:0,15,131	0/0:19,1:19:13.40:0,13,374	0/0:27,0:26:69.04:0,69,630	0/0:15,0:15:35.90:0,36,322	0/0:11,0:11:11.13:0,11,151	0/0:18,0:18:30.36:0,30,377	0/0:16,0:16:43.24:0,43,374	0/0:10,0:10:23.82:0,24,180
chr10	63792837	.	T	TG	87.09	PASS	AB=0.838;AC=3;AF=0.054;AN=56;BaseQRankSum=6.068;DP=723;FS=0.000;HRun=0;HaplotypeScore=104.4564;InbreedingCoeff=-0.0595;MQ=57.68;MQ0=11;MQRankSum=-5.975;QD=1.94;ReadPosRankSum=-4.936;VQSLOD=0.6700;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,2:32:47.73:0,48,1044	0/0:11,0:11:33.11:0,33,462	0/0:7,0:3:9.03:0,9,126	0/0:11,1:7:21.06:0,21,276	0/0:32,0:32:93.30:0,93,1285	0/0:29,0:29:76.05:0,76,887	0/1:19,1:18:5.67:6,0,484	0/0:30,0:28:81.27:0,81,1133	0/0:25,0:25:69.23:0,69,834	0/0:32,0:31:87.28:0,87,1199	0/0:24,0:24:69.23:0,69,961	0/0:28,0:28:74.57:0,75,993	0/0:22,0:22:53.47:0,53,638	0/0:25,1:26:29.54:0,30,943	0/0:22,0:22:65.25:0,65,885	0/0:34,1:35:47.60:0,48,1202	0/0:38,0:38:99:0,101,1299	0/0:21,1:22:6.35:0,6,643	0/0:32,0:27:70.96:0,71,925	0/0:36,1:36:57.48:0,57,1331	0/1:10,3:11:17.74:18,0,347	0/0:32,2:33:72.17:0,72,1167	0/0:20,0:20:60.20:0,60,839	0/0:27,1:28:27.49:0,27,926	0/0:25,1:26:58.07:0,58,993	0/0:37,0:37:99:0,110,1465	0/0:35,2:37:11.67:0,12,1260	0/1:8,4:12:99:156,0,300
chr10	63793503	.	CCTG	C	2276.91	PASS	AB=0.801;AC=32;AF=0.696;AN=46;BaseQRankSum=-1.476;DP=295;FS=0.000;HRun=0;HaplotypeScore=41.0706;InbreedingCoeff=0.2927;MQ=38.73;MQ0=51;MQRankSum=0.750;QD=9.57;ReadPosRankSum=-0.233;VQSLOD=2.0867;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,0:3:2.97:20,3,0	1/1:1,0:1:3.01:36,3,0	0/0:9,0:4:11.93:0,12,123	0/1:17,0:8:0.64:1,0,246	0/0:3,0:2:3.01:0,3,61	1/1:2,5:6:3.01:46,3,0	0/1:46,6:30:99:397,0,104	0/0:4,0:1:3.01:0,3,64	1/1:2,4:4:3.01:47,3,0	./.	./.	0/1:7,11:14:32.83:254,0,33	0/0:8,0:6:15.05:0,15,302	0/1:6,5:7:40.52:127,0,41	1/1:1,3:3:6.02:93,6,0	1/1:0,1:1:3.01:46,3,0	1/1:14,9:15:4.37:280,4,0	1/1:5,14:15:24.08:371,24,0	1/1:8,0:1:3.01:37,3,0	./.	1/1:20,28:34:21.07:324,21,0	./.	./.	0/0:25,0:22:31.08:0,31,592	1/1:2,0:1:2.88:15,3,0	1/1:1,5:5:14.94:145,15,0	1/1:0,7:7:8.65:137,9,0	1/1:2,3:5:3.01:46,3,0
chr10	63795207	.	C	CT	619.75	PASS	AB=0.833;AC=5;AF=0.089;AN=56;BaseQRankSum=-3.669;DP=447;FS=13.634;HRun=11;HaplotypeScore=45.0442;InbreedingCoeff=0.6307;MQ=68.97;MQ0=5;MQRankSum=-0.293;QD=14.76;ReadPosRankSum=2.308;VQSLOD=2.6055;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,22:26:54.11:548,54,0	1/1:4,6:10:18.04:183,18,0	0/0:16,0:12:20.35:0,20,162	0/0:7,0:8:4.99:0,5,29	0/0:32,0:32:83.24:0,83,624	0/0:18,0:18:47.82:0,48,371	0/0:11,1:12:2.45:0,2,201	0/0:34,0:33:71.66:0,72,555	0/0:12,0:12:28.12:0,28,210	0/0:20,0:21:56.75:0,57,436	0/0:24,0:24:49.63:0,50,409	0/0:8,0:8:14.91:0,15,113	0/0:12,0:12:32.84:0,33,253	0/0:7,0:7:17.92:0,18,137	0/0:7,0:7:20.91:0,21,160	0/0:6,0:6:11.94:0,12,92	0/0:23,0:23:56.77:0,57,441	0/0:17,0:17:34.35:0,34,254	0/0:23,0:23:35.81:0,36,275	0/0:14,0:14:29.87:0,30,232	0/0:8,0:8:14.94:0,15,116	0/1:4,1:5:15.50:15,0,77	0/0:12,0:12:29.63:0,30,218	0/0:4,0:4:5.86:0,6,38	0/0:18,0:19:44.79:0,45,345	0/0:26,0:26:47.77:0,48,371	0/0:25,0:25:68.70:0,69,529	0/0:17,0:17:50.81:0,51,395
chr10	63796978	.	G	GGT	9316.94	PASS	AB=0.635;AC=27;AF=0.482;AN=56;BaseQRankSum=-12.273;DP=641;FS=3.808;HRun=0;HaplotypeScore=78.2210;InbreedingCoeff=0.3787;MQ=72.47;MQ0=14;MQRankSum=1.467;QD=23.23;ReadPosRankSum=3.257;VQSLOD=4.9556;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:19:14.19:0,14,70	0/0:2,0:7:14.20:0,14,70	0/0:47,0:25:12.67:0,13,214	0/0:37,0:21:22.68:0,23,241	0/0:26,0:26:46.67:0,47,519	0/1:7,15:23:33.89:434,0,34	0/1:7,13:20:1.90:437,0,2	0/0:26,0:27:29.92:0,30,329	0/1:16,10:25:4.91:384,0,5	1/1:6,18:24:19.17:751,19,0	1/1:4,14:18:1.12:470,1,0	0/1:6,12:21:24.82:563,0,25	0/0:16,0:18:29.92:0,30,329	1/1:7,15:21:36.12:564,36,0	0/1:7,16:25:29.97:651,0,30	0/1:11,14:25:59.77:519,0,60	1/1:3,12:15:30.10:470,30,0	1/1:6,9:15:25.64:380,26,0	0/1:21,10:28:99:384,0,100	1/1:6,11:18:21.07:319,21,0	1/1:11,22:34:22.19:811,22,0	0/0:11,0:11:21.06:0,21,246	0/0:18,0:19:47.97:0,48,538	0/0:26,0:26:47.96:0,48,529	1/1:3,11:14:27.09:423,27,0	0/1:14,16:31:15.88:623,0,16	1/1:4,18:24:48.16:741,48,0	0/1:4,9:13:4.91:393,0,5
chr10	63797921	.	T	TTTTCTTTC	14375.80	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=4.336;DP=533;FS=0.000;HRun=0;HaplotypeScore=185.2941;InbreedingCoeff=0.8816;MQ=51.59;MQ0=2;MQRankSum=-7.710;QD=30.39;ReadPosRankSum=-1.398;VQSLOD=3.8268;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:20:26.54:242,27,0	1/1:10,0:9:14.79:176,15,0	0/0:12,0:10:6.02:0,6,153	0/0:12,0:8:6:0,6,100	1/1:13,9:20:21.07:717,21,0	1/1:21,0:21:53.64:938,54,0	1/1:30,0:28:56.37:779,56,0	1/1:42,0:39:49.06:551,49,0	1/1:17,0:17:41.52:594,42,0	1/1:30,0:30:74.51:1335,75,0	1/1:18,0:18:35.71:728,36,0	1/1:15,0:14:32.69:492,33,0	0/0:14,0:14:33.07:0,33,764	1/1:16,0:15:23.65:325,24,0	1/1:18,0:18:3.01:63,3,0	1/1:16,0:16:29.62:369,30,0	1/1:24,0:24:48.07:880,48,0	1/1:15,0:15:17.31:278,17,0	1/1:24,0:23:15.09:764,15,0	1/1:19,0:18:38.54:660,39,0	1/1:14,0:14:14.98:218,15,0	0/0:4,0:4:6.02:0,6,154	0/0:10,0:10:24.07:0,24,542	0/0:8,0:8:15.01:0,15,328	1/1:25,0:23:53.55:1027,54,0	1/1:31,0:30:68.88:1477,69,0	1/1:31,0:31:77.35:1443,77,0	1/1:14,0:14:20.86:321,21,0
chr10	63797944	.	T	TC	2896.65	PASS	AB=0.935;AC=23;AF=0.411;AN=56;BaseQRankSum=-6.173;DP=462;FS=10.951;HRun=0;HaplotypeScore=77.9433;InbreedingCoeff=-0.4397;MQ=41.92;MQ0=4;MQRankSum=-7.084;QD=7.33;ReadPosRankSum=1.367;VQSLOD=2.6063;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:18,0:18:95.68:96,0,265	0/1:8,0:7:54.84:55,0,66	0/0:6,0:2:6.02:0,6,84	0/0:10,0:3:6.02:0,6,72	0/0:13,0:11:4.29:0,4,186	0/1:22,2:24:50.12:187,0,50	0/1:25,0:23:14.46:235,0,14	1/1:38,0:28:22.89:364,23,0	0/1:15,1:16:6.87:163,0,7	1/1:23,3:26:0.83:345,1,0	0/1:18,2:20:67.37:102,0,67	0/1:13,0:12:21.90:114,0,22	0/0:15,0:15:45.10:0,45,590	0/1:10,0:9:11.04:85,0,11	0/1:1,14:15:8.41:32,0,8	0/1:14,1:15:24.55:105,0,25	0/1:18,2:20:62.34:131,0,62	0/1:13,0:13:43.73:58,0,44	0/1:23,2:21:73.35:132,0,73	0/1:15,1:15:31.56:118,0,32	0/1:5,0:5:11.78:40,0,12	0/0:5,0:5:12.04:0,12,167	0/0:11,0:11:33.09:0,33,428	0/0:7,0:7:21.02:0,21,269	0/1:22,2:22:52.84:167,0,53	0/1:26,3:28:47.54:248,0,48	0/1:26,2:28:90.12:222,0,90	0/1:7,0:7:16.76:58,0,17
chr10	63797945	.	T	TTTCTTTCTTTCTTTCTTTCTTTC	51486.71	PASS	AB=1.000;AC=40;AF=0.714;AN=56;BaseQRankSum=5.272;DP=465;FS=2.456;HRun=0;HaplotypeScore=282.2416;InbreedingCoeff=0.5779;MQ=41.97;MQ0=4;MQRankSum=-7.734;QD=125.27;ReadPosRankSum=5.172;VQSLOD=3.9441;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:18,0:18:78.86:1691,0,79	0/1:8,0:7:26.83:842,0,27	0/0:6,0:2:6.02:0,6,140	0/0:10,0:3:5.23:0,5,124	0/1:16,0:14:59.59:60,0,113	1/1:22,0:24:32.67:2627,33,0	1/1:25,0:23:64.89:3175,65,0	0/1:36,0:26:79.27:79,0,215	1/1:16,1:17:42.11:2779,42,0	1/1:24,2:26:77.36:4672,77,0	1/1:18,2:20:59.03:2502,59,0	1/1:14,0:13:35.31:1830,35,0	0/0:15,0:15:42.05:0,42,1739	1/1:10,0:9:24.05:1201,24,0	1/1:15,0:15:5.91:37,6,0	1/1:14,1:15:45.09:1591,45,0	1/1:18,2:20:54.02:3705,54,0	1/1:13,0:13:35.23:2079,35,0	1/1:25,1:22:52.58:2673,53,0	1/1:15,1:15:45.11:2898,45,0	1/1:4,0:4:11.64:368,12,0	0/0:5,0:5:12.03:0,12,369	0/0:11,0:11:29.99:0,30,1083	0/0:7,0:7:21.03:0,21,738	1/1:22,2:22:46.26:4511,46,0	1/1:27,2:28:80.44:4886,80,0	1/1:26,2:28:82.61:5975,83,0	1/1:7,0:7:18.05:1305,18,0
chr10	63798399	.	G	GC	11700.78	PASS	AB=0.568;AC=35;AF=0.625;AN=56;BaseQRankSum=-3.456;DP=440;FS=0.000;HRun=1;HaplotypeScore=54.3122;InbreedingCoeff=0.7926;MQ=51.33;MQ0=11;MQRankSum=-0.087;QD=33.24;ReadPosRankSum=1.956;VQSLOD=4.4265;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:36.12:0,36,466	0/0:1,0:1:3.01:0,3,39	0/0:1,0:1:2.97:0,3,20	0/0:5,0:2:3.01:0,3,39	0/0:7,0:7:21.06:0,21,258	1/1:1,17:18:35.91:537,36,0	0/1:5,16:17:5.88:392,0,6	0/0:8,0:3:9.03:0,9,117	1/1:2,18:20:29.94:448,30,0	1/1:0,16:14:36.10:517,36,0	1/1:0,8:8:21.07:314,21,0	1/1:0,11:11:24.08:359,24,0	0/0:5,0:5:15.05:0,15,193	1/1:3,20:22:0.11:496,0,0	1/1:0,13:12:30.06:419,30,0	1/1:2,18:20:51.17:761,51,0	1/1:2,31:33:42.35:1118,42,0	1/1:3,33:36:60.37:1374,60,0	1/1:7,10:10:30.10:449,30,0	1/1:0,12:12:33.11:490,33,0	1/1:1,30:30:90.30:1348,90,0	0/0:9,0:9:21.07:0,21,272	0/0:4,0:4:6.02:0,6,77	0/0:29,0:29:72.19:0,72,915	1/1:0,11:11:30.10:449,30,0	1/1:1,23:24:33.28:973,33,0	1/1:2,19:21:42.14:625,42,0	1/1:0,17:17:42.14:629,42,0
chr10	63798469	.	A	AAAAC	447.27	PASS	AB=0.725;AC=2;AF=0.036;AN=56;BaseQRankSum=3.962;DP=570;FS=5.459;HRun=0;HaplotypeScore=125.6055;InbreedingCoeff=0.1245;MQ=63.69;MQ0=12;MQRankSum=-4.139;QD=14.91;ReadPosRankSum=0.088;VQSLOD=2.7513;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:12,12:26:99:444,0,142	0/1:3,1:4:6.08:92,0,6	0/0:57,0:20:11.34:0,11,274	0/0:58,0:19:32.74:0,33,470	0/0:17,0:16:45.08:0,45,699	0/0:11,0:11:33.11:0,33,558	0/0:17,0:17:42.14:0,42,685	0/0:35,0:35:93.27:0,93,1458	0/0:17,0:17:35.95:0,36,639	0/0:11,0:11:27.07:0,27,460	0/0:20,0:20:57.18:0,57,902	0/0:12,0:12:24.07:0,24,349	0/0:7,0:7:12:0,12,186	0/0:14,0:14:27.05:0,27,452	0/0:13,0:11:15.05:0,15,252	0/0:18,0:17:39.13:0,39,627	0/0:41,0:41:99:0,108,1690	0/0:32,0:32:78.23:0,78,1185	0/0:26,0:20:57.17:0,57,899	0/0:5,0:5:15.05:0,15,275	0/0:21,0:20:57.18:0,57,880	0/0:7,0:7:21.04:0,21,300	0/0:5,0:5:15.05:0,15,259	0/0:33,0:33:81.24:0,81,1279	0/0:13,0:13:39.13:0,39,700	0/0:25,0:25:63.21:0,63,1068	0/0:15,0:15:42.10:0,42,648	0/0:10,0:10:30.10:0,30,553
chr10	63799550	.	C	CT	1881.67	PASS	AB=0.833;AC=38;AF=0.679;AN=56;BaseQRankSum=-0.683;DP=419;FS=0.000;HRun=15;HaplotypeScore=56.0466;InbreedingCoeff=0.2733;MQ=65.74;MQ0=2;MQRankSum=-3.517;QD=5.53;ReadPosRankSum=-0.072;VQSLOD=1.9375;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:29,2:31:55.50:56,0,92	0/1:7,1:9:6.37:31,0,6	0/1:20,0:10:10.54:11,0,12	0/0:19,0:11:2.60:0,3,16	0/0:30,2:31:24.72:0,25,223	1/1:6,6:13:15.56:106,16,0	1/1:2,1:3:8.97:70,9,0	1/1:20,9:29:13.27:178,13,0	1/1:4,0:4:5.96:43,6,0	1/1:9,10:20:2.54:97,3,0	0/1:11,8:20:6.24:40,0,6	1/1:4,5:9:5.99:50,6,0	0/0:6,0:6:5.70:0,6,36	1/1:4,0:9:5.80:33,6,0	0/1:4,3:7:0.05:103,0,0	1/1:1,4:5:5.99:50,6,0	1/1:15,9:28:53.19:387,53,0	0/1:5,6:12:0.15:97,0,0	0/1:12,2:15:11.05:43,0,11	1/1:4,13:17:26.85:209,27,0	1/1:6,4:10:0.94:1,1,0	0/0:6,0:6:7.31:0,7,40	0/0:15,0:15:16.42:0,16,106	0/1:10,0:9:3.98:4,0,72	1/1:15,4:20:7.72:153,8,0	1/1:10,4:16:9.97:143,10,0	1/1:9,14:23:6.43:73,6,0	1/1:1,4:7:8.83:64,9,0
chr10	63799933	.	AGTGTGT	A	4926.87	PASS	AB=0.690;AC=40;AF=0.741;AN=54;BaseQRankSum=6.242;DP=553;FS=2.958;HRun=0;HaplotypeScore=126.3134;InbreedingCoeff=0.5838;MQ=59.27;MQ0=11;MQRankSum=-7.467;QD=13.24;ReadPosRankSum=1.428;VQSLOD=4.2860;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:22,7:30:6.02:103,6,0	1/1:3,3:6:3.01:61,3,0	0/0:34,0:11:0.47:0,0,1	./.	0/1:7,1:19:29.13:29,0,370	1/1:11,10:22:21.07:410,21,0	1/1:14,6:20:3.01:61,3,0	0/0:36,0:36:46.18:0,46,910	1/1:5,3:10:12.04:184,12,0	0/1:16,7:22:30.80:427,0,31	1/1:7,11:18:9:184,9,0	1/1:8,6:14:15.94:289,16,0	0/0:14,0:17:18.53:0,19,467	1/1:5,7:14:21.07:391,21,0	1/1:14,7:21:24.02:366,24,0	1/1:6,10:17:30.10:593,30,0	1/1:22,2:28:12.04:207,12,0	1/1:9,2:11:3:61,3,0	1/1:12,1:15:9.03:136,9,0	1/1:9,8:18:21.07:391,21,0	1/1:38,0:39:8.98:104,9,0	0/0:17,0:18:11.51:0,12,345	0/0:19,0:22:26.26:0,26,767	0/0:23,0:27:47.33:0,47,1339	1/1:3,0:5:3.01:42,3,0	1/1:10,3:15:15.05:268,15,0	1/1:11,8:20:15.05:288,15,0	1/1:0,4:6:18.06:330,18,0
chr10	63801664	.	CAGGAAGGAAGGA	C	5178.11	PASS	AB=0.933;AC=33;AF=0.611;AN=54;BaseQRankSum=3.987;DP=374;FS=0.000;HRun=0;HaplotypeScore=123.6786;InbreedingCoeff=0.6784;MQ=64.28;MQ0=5;MQRankSum=-6.565;QD=23.54;ReadPosRankSum=0.843;VQSLOD=3.7193;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:39:69.19:0,69,3178	0/0:3,0:4:3.01:0,3,157	1/1:8,0:5:0.47:1,0,0	./.	0/0:10,0:10:18.06:0,18,774	1/1:7,9:15:6.02:206,6,0	1/1:7,12:19:3.01:97,3,0	0/0:14,0:13:9.02:0,9,102	1/1:10,0:10:9.03:248,9,0	1/1:1,6:7:18.06:435,18,0	0/0:1,6:7:0:0,0,0	1/1:7,6:13:11.81:412,12,0	0/0:12,0:12:18.06:0,18,794	1/1:8,9:17:15.05:515,15,0	1/1:8,6:14:11.99:328,12,0	1/1:8,8:16:14.30:514,14,0	1/1:8,4:13:3.01:103,3,0	0/1:13,1:14:99:136,0,236	1/1:9,5:13:12.04:352,12,0	1/1:0,10:10:12:208,12,0	0/0:13,9:22:4.21:0,4,10	0/0:15,0:15:33.10:0,33,1361	0/0:4,0:4:9.03:0,9,248	0/0:20,0:20:39.13:0,39,2187	1/1:4,8:12:18.06:551,18,0	1/1:4,6:10:18.06:557,18,0	1/1:12,7:19:5.71:206,6,0	1/1:5,3:8:9.03:308,9,0
chr10	63803968	.	GAC	G	5733.64	PASS	AB=0.500;AC=31;AF=0.596;AN=52;BaseQRankSum=-2.263;DP=549;FS=4.201;HRun=0;HaplotypeScore=78.2222;InbreedingCoeff=0.8983;MQ=70.99;MQ0=17;MQRankSum=-0.901;QD=24.71;ReadPosRankSum=1.926;VQSLOD=5.3022;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:60.20:0,60,927	0/0:12,0:12:35.91:0,36,522	0/0:73,0:25:5.69:0,6,441	0/0:94,0:22:30.97:0,31,307	0/0:15,0:15:42.14:0,42,645	1/1:17,0:17:51.17:758,51,0	1/1:14,1:14:29.33:431,29,0	0/0:16,0:16:45.11:0,45,718	1/1:21,0:20:51.16:756,51,0	1/1:9,2:11:32.47:444,32,0	./.	1/1:1,13:14:2.97:20,3,0	0/0:9,0:9:26.86:0,27,362	./.	0/1:0,15:15:0:0,0,0	1/1:2,23:25:5.57:52,6,0	1/1:11,0:11:25.80:333,26,0	1/1:0,9:9:8.97:102,9,0	1/1:0,10:10:24.53:346,25,0	1/1:0,14:14:14.46:90,14,0	1/1:14,0:13:20.73:271,21,0	0/0:14,0:13:27.08:0,27,405	0/0:13,0:13:33.11:0,33,519	0/0:27,0:27:62.44:0,62,909	1/1:12,2:14:36.12:546,36,0	1/1:17,1:18:54.05:743,54,0	1/1:14,2:16:37.06:521,37,0	1/1:8,0:7:21.07:319,21,0
chr10	63804025	.	G	GGC	3745.09	PASS	AB=0.974;AC=23;AF=0.442;AN=52;BaseQRankSum=1.762;DP=472;FS=8.785;HRun=0;HaplotypeScore=101.5516;InbreedingCoeff=-0.2018;MQ=40.39;MQ0=85;MQRankSum=2.580;QD=10.40;ReadPosRankSum=2.822;VQSLOD=2.7901;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:27:67.01:0,67,884	0/0:6,0:6:3.72:0,4,135	./.	./.	0/0:12,0:10:9.03:0,9,137	0/1:23,0:15:74.84:152,0,75	1/1:22,0:18:17.35:284,17,0	0/0:13,0:12:24.02:0,24,104	0/1:19,0:16:76.61:257,0,77	0/1:27,0:15:99:345,0,126	1/1:14,0:11:10.96:179,11,0	0/1:21,0:17:59.76:227,0,60	0/0:15,0:13:23.63:0,24,334	1/1:11,0:7:2.71:37,3,0	0/1:13,0:10:2.51:36,0,3	0/1:19,0:15:34.85:294,0,35	0/1:19,0:15:43.43:122,0,43	0/1:15,0:13:47.87:259,0,48	0/1:19,0:9:65.19:160,0,65	1/1:16,0:9:9.63:194,10,0	0/1:37,0:25:99:201,0,157	0/0:16,0:16:7.13:0,7,96	0/0:16,0:13:10.77:0,11,144	0/1:30,1:29:1.72:2,0,738	0/1:20,0:13:41.38:229,0,41	0/1:5,6:9:30.95:281,0,31	0/1:8,0:6:21.53:179,0,22	0/1:15,0:11:60.93:308,0,61
chr10	63804377	.	T	TG	13193.80	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-14.340;DP=572;FS=2.337;HRun=3;HaplotypeScore=51.3884;InbreedingCoeff=0.9988;MQ=96.70;MQ0=0;MQRankSum=-5.086;QD=36.55;ReadPosRankSum=3.099;VQSLOD=5.3783;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,105,1259	0/0:9,0:9:27.08:0,27,323	0/0:28,0:28:78.20:0,78,904	0/0:29,0:29:71.07:0,71,907	0/0:12,0:12:30.09:0,30,359	1/1:4,19:24:63.12:833,63,0	1/1:0,19:19:51.17:714,51,0	0/0:31,0:31:81.23:0,81,953	1/1:0,16:16:45.15:630,45,0	1/1:2,22:24:69.21:937,69,0	1/1:1,8:9:21.07:294,21,0	1/1:1,19:20:54.18:755,54,0	0/0:17,0:17:51.11:0,51,577	1/1:0,19:19:45.15:630,45,0	1/1:2,20:22:48.16:672,48,0	1/1:1,24:25:69.23:966,69,0	1/1:0,23:23:63.21:882,63,0	1/1:2,22:24:51.17:714,51,0	1/1:0,17:17:51.14:693,51,0	1/1:0,9:9:24.08:333,24,0	1/1:1,30:31:84.28:1170,84,0	0/0:13,0:13:36.11:0,36,432	0/0:15,0:15:39.08:0,39,450	0/0:20,0:20:51.14:0,51,598	1/1:0,12:12:33.11:461,33,0	1/1:2,24:26:72.24:1001,72,0	1/1:1,26:27:75.25:1049,75,0	1/1:0,14:14:33.11:461,33,0
chr10	63804753	.	C	CA	97.25	PASS	AB=0.773;AC=2;AF=0.038;AN=52;BaseQRankSum=3.721;DP=274;FS=4.863;HRun=0;HaplotypeScore=39.6526;InbreedingCoeff=-0.0730;MQ=82.32;MQ0=1;MQRankSum=3.715;QD=5.72;ReadPosRankSum=-1.873;VQSLOD=2.5017;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:36.08:0,36,452	./.	0/1:5,3:8:88.12:114,0,88	0/1:7,2:8:58.88:71,0,59	./.	0/0:5,0:5:15.03:0,15,192	0/0:25,0:25:72.21:0,72,967	0/0:10,0:10:24.05:0,24,288	0/0:7,0:7:18.06:0,18,251	0/0:4,0:4:12.04:0,12,167	0/0:3,0:3:9.02:0,9,108	0/0:7,0:7:21.07:0,21,292	0/0:7,0:7:21.07:0,21,290	0/0:6,0:6:18.06:0,18,251	0/0:10,0:10:24.08:0,24,335	0/0:4,0:4:12.04:0,12,168	0/0:28,0:28:84.26:0,84,1151	0/0:16,0:16:48.16:0,48,670	0/0:10,0:10:26.66:0,27,325	0/0:1,0:1:3.01:0,3,42	0/0:54,0:52:99:0,153,2072	0/0:2,0:2:6.02:0,6,84	0/0:3,0:3:6.02:0,6,84	0/0:27,0:27:78.23:0,78,1051	0/0:2,0:2:6.02:0,6,84	0/0:5,0:5:15.05:0,15,208	0/0:5,0:5:12.02:0,12,149	0/0:2,0:2:5.97:0,6,45
chr10	63804993	.	TG	T	7518.05	PASS	AB=0.833;AC=43;AF=0.896;AN=48;BaseQRankSum=-3.393;DP=237;FS=3.031;HRun=3;HaplotypeScore=61.5005;InbreedingCoeff=0.2490;MQ=72.79;MQ0=0;MQRankSum=-1.766;QD=32.13;ReadPosRankSum=1.800;VQSLOD=5.2265;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,14:14:36.11:446,36,0	1/1:0,2:2:3.01:37,3,0	0/0:1,1:2:3.01:0,3,43	0/1:4,1:4:0.99:15,0,1	0/0:0,1:1:0.47:0,0,1	./.	1/1:1,32:33:90.28:1115,90,0	1/1:0,2:2:6.02:74,6,0	1/1:0,2:2:6.02:74,6,0	1/1:0,4:4:12.04:149,12,0	1/1:0,2:2:6.02:74,6,0	1/1:0,6:6:18.06:222,18,0	1/1:1,0:1:3.01:36,3,0	1/1:0,1:1:3.01:37,3,0	1/1:0,1:1:3.01:37,3,0	./.	1/1:1,37:38:93.29:1152,93,0	1/1:0,18:18:48.15:594,48,0	1/1:1,3:4:9.03:112,9,0	./.	1/1:3,50:53:99:1747,141,0	1/1:0,6:6:18.06:223,18,0	1/1:0,5:5:15.05:185,15,0	1/1:1,29:30:78.24:967,78,0	./.	1/1:0,3:3:9.03:112,9,0	1/1:2,0:2:3.01:35,3,0	1/1:0,2:2:6.02:74,6,0
chr10	63806289	.	CT	C	3934.52	PASS	AB=0.830;AC=41;AF=0.732;AN=56;BaseQRankSum=3.231;DP=368;FS=27.144;HRun=12;HaplotypeScore=46.5112;InbreedingCoeff=0.6144;MQ=80.39;MQ0=0;MQRankSum=0.003;QD=13.90;ReadPosRankSum=5.050;VQSLOD=1.7421;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:34:87.40:0,87,830	0/1:9,1:10:5.18:5,0,134	0/1:11,0:11:0.47:0,0,65	0/0:12,0:11:13.04:0,13,86	0/1:4,7:11:6.54:139,0,7	1/1:1,10:11:26.89:209,27,0	1/1:3,13:16:11.38:271,11,0	0/0:23,0:23:57.08:0,57,562	1/1:6,8:14:23.86:186,24,0	1/1:1,9:10:23.88:183,24,0	1/1:1,9:10:20.89:162,21,0	1/1:3,12:15:35.82:278,36,0	0/0:7,0:8:17.81:0,18,154	1/1:5,12:17:38.80:302,39,0	1/1:4,7:11:20.88:162,21,0	1/1:3,11:14:26.88:209,27,0	1/1:2,13:15:29.88:232,30,0	1/1:2,6:10:21.98:151,22,0	1/1:2,1:5:10.05:58,10,0	1/1:3,8:12:25.94:192,26,0	1/1:9,21:32:57.82:430,58,0	0/0:7,0:8:20.87:0,21,192	0/1:4,1:5:9.05:9,0,69	0/1:6,1:7:11.21:11,0,79	1/1:5,2:7:5.91:46,6,0	1/1:2,7:9:20.92:163,21,0	1/1:3,15:18:43.05:328,43,0	1/1:3,9:12:26.73:208,27,0
chr10	63806357	.	CCCT	C	1209.63	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=2.991;DP=191;FS=1.737;HRun=0;HaplotypeScore=32.9859;InbreedingCoeff=0.6905;MQ=91.06;MQ0=0;MQRankSum=-3.915;QD=32.69;ReadPosRankSum=4.146;VQSLOD=3.6465;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,31:33:66.23:1121,66,0	1/1:0,4:4:12.04:205,12,0	0/0:7,0:7:20.74:0,21,377	0/0:11,0:11:32.94:0,33,655	0/0:6,0:6:18.06:0,18,376	0/0:4,0:4:9.02:0,9,145	0/0:5,0:5:12.04:0,12,253	0/0:9,0:9:24.08:0,24,478	0/0:3,0:3:9.03:0,9,208	0/0:12,0:12:33.11:0,33,690	0/0:8,0:8:18.06:0,18,368	0/0:7,0:7:21.07:0,21,466	0/0:1,0:1:3.01:0,3,69	0/0:6,0:6:18.05:0,18,351	0/0:7,0:7:21.07:0,21,460	0/0:10,0:10:24.08:0,24,529	0/0:8,0:8:24.08:0,24,489	0/0:5,0:5:15.05:0,15,326	0/0:5,0:5:15.03:0,15,285	0/0:5,0:5:15.05:0,15,345	0/0:9,0:9:21.07:0,21,465	0/0:2,0:2:6.02:0,6,138	0/0:3,0:3:9.03:0,9,207	0/0:3,0:3:9.03:0,9,207	0/0:3,0:3:9.03:0,9,185	0/0:5,0:5:12.04:0,12,263	0/0:5,0:5:15.05:0,15,345	0/0:5,0:5:15.05:0,15,309
chr10	63807681	.	GGTGTGTGTGTGT	G	54.55	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=0.550;DP=506;FS=2.232;HRun=0;HaplotypeScore=153.6619;InbreedingCoeff=0.5448;MQ=69.31;MQ0=19;MQRankSum=-1.860;QD=0.94;ReadPosRankSum=-0.924;VQSLOD=2.8607;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:24,17:39:5.67:127,6,0	1/1:2,0:3:2.98:22,3,0	0/0:27,0:13:6.02:0,6,164	0/0:24,0:15:5.98:0,6,101	0/0:12,0:11:12.04:0,12,309	0/0:19,0:19:36.12:0,36,1247	0/0:17,0:17:8.91:0,9,246	0/0:15,0:22:27.09:0,27,583	0/0:13,0:13:15.05:0,15,299	0/0:22,0:21:36.12:0,36,1304	0/0:8,0:8:3.01:0,3,60	0/0:12,0:11:15.05:0,15,419	0/0:6,0:6:9.03:0,9,305	0/1:13,0:13:0:0,0,0	0/0:16,0:16:27.08:0,27,752	0/0:14,0:15:9.02:0,9,314	0/0:38,0:38:30.07:0,30,784	0/0:25,0:24:33.08:0,33,885	0/0:16,0:16:18.06:0,18,480	0/0:8,0:8:9.03:0,9,326	0/0:27,0:26:39.13:0,39,1207	0/0:16,0:16:18.06:0,18,656	0/0:11,0:11:24.08:0,24,856	0/0:20,0:20:33.11:0,33,1214	0/0:23,0:23:18.06:0,18,592	0/0:19,0:19:39.13:0,39,1362	0/0:22,0:22:30.05:0,30,809	0/0:9,0:7:6:0,6,88
chr10	63807713	.	TGTGTGCGC	T	2298.81	PASS	AB=0.971;AC=25;AF=0.446;AN=56;BaseQRankSum=5.266;DP=455;FS=1.227;HRun=0;HaplotypeScore=99.4387;InbreedingCoeff=-0.1928;MQ=57.27;MQ0=19;MQRankSum=1.022;QD=6.64;ReadPosRankSum=5.398;VQSLOD=1.4310;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:35:4.56:0,5,429	0/0:3,0:3:2.37:0,2,8	0/0:7,0:2:3.01:0,3,33	0/0:5,0:2:3:0,3,26	0/1:12,0:11:31.79:32,0,39	0/1:20,0:19:67.98:210,0,68	0/1:29,0:29:27.28:27,0,30	1/1:13,0:12:20.48:225,20,0	1/1:12,1:13:13.75:160,14,0	0/1:20,0:19:99:303,0,118	1/1:10,0:10:3:27,3,0	0/1:16,0:14:16.04:35,0,16	0/1:6,0:6:8.67:9,0,150	0/1:15,0:15:0.01:0,0,0	1/1:9,0:9:5.88:170,6,0	0/0:15,0:15:5.69:0,6,75	0/1:34,1:35:57.98:165,0,58	0/1:36,0:33:75.72:156,0,76	0/1:17,0:16:11.76:290,0,12	0/1:7,0:7:31.22:31,0,40	0/1:22,0:21:63.50:330,0,64	0/0:7,0:6:12.76:0,13,85	0/0:12,0:11:17.52:0,18,374	0/0:22,0:22:36.20:0,36,514	0/1:12,1:13:54.54:57,0,55	0/1:20,0:20:60.30:102,0,60	0/1:12,13:25:47.93:102,0,48	1/1:8,0:6:3:27,3,0
chr10	63807715	.	TGTGCGC	T	4598.19	PASS	AB=0.791;AC=35;AF=0.625;AN=56;BaseQRankSum=3.951;DP=452;FS=0.000;HRun=0;HaplotypeScore=82.5011;InbreedingCoeff=0.0662;MQ=58.78;MQ0=19;MQRankSum=1.445;QD=12.04;ReadPosRankSum=2.312;VQSLOD=3.2048;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:38:27.36:0,27,566	0/0:3,0:3:2.37:0,2,8	0/0:7,0:3:2.84:0,3,14	0/0:5,0:2:2.74:0,3,12	0/1:12,0:11:14.53:41,0,15	1/1:20,0:19:19.95:501,20,0	0/1:6,23:29:10.75:117,0,11	1/1:14,0:13:13.03:89,13,0	1/1:3,10:13:14.62:310,15,0	1/1:5,14:18:41.07:507,41,0	1/1:2,7:9:3.01:72,3,0	1/1:6,9:13:5.66:105,6,0	0/1:6,0:6:29.58:30,0,61	0/1:3,13:16:0:0,0,0	1/1:9,0:9:26.91:295,27,0	0/0:3,11:14:2.66:0,3,25	0/1:4,30:35:4.47:174,0,4	0/1:7,27:31:16.71:472,0,17	1/1:6,10:15:27.54:409,28,0	0/1:7,0:7:10.05:30,0,10	0/1:23,0:22:0.94:491,0,1	1/1:5,0:4:5.97:45,6,0	0/1:12,0:11:33.49:33,0,145	0/1:23,0:24:99:111,0,285	0/1:2,10:12:11.95:82,0,12	1/1:7,13:20:35.06:364,35,0	1/1:24,0:24:23.30:248,23,0	1/1:2,6:6:3.01:72,3,0
chr10	63809327	.	TA	T	4306.12	PASS	AB=1.000;AC=39;AF=0.722;AN=54;BaseQRankSum=10.309;DP=454;FS=4.521;HRun=10;HaplotypeScore=95.7542;InbreedingCoeff=0.8756;MQ=66.06;MQ0=5;MQRankSum=-2.320;QD=13.33;ReadPosRankSum=3.870;VQSLOD=5.0342;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:48.01:0,48,480	0/0:3,0:3:9.02:0,9,98	0/0:44,1:18:16.02:0,16,121	0/1:28,0:11:7.24:7,0,13	1/1:4,0:19:20.87:63,21,0	1/1:7,16:23:52.52:413,53,0	1/1:1,2:4:6:51,6,0	0/0:34,0:34:78.94:0,79,851	1/1:1,8:10:23.77:187,24,0	1/1:4,7:13:25.99:172,26,0	1/1:8,17:25:51.95:397,52,0	1/1:3,8:13:31.29:221,31,0	0/0:6,0:6:15.04:0,15,163	1/1:1,5:8:17.01:122,17,0	1/1:2,10:13:19.99:153,20,0	1/1:3,8:14:25.40:187,25,0	1/1:6,18:25:55.97:456,56,0	1/1:6,9:12:20.99:207,21,0	1/1:3,7:14:24.09:180,24,0	1/1:10,7:19:28.92:204,29,0	1/1:3,2:5:8.36:57,8,0	0/0:11,0:11:27.03:0,27,271	0/0:11,0:11:30.08:0,30,327	./.	1/1:9,12:21:36.30:271,36,0	1/1:7,11:21:45.51:294,46,0	1/1:3,11:14:34.32:287,34,0	1/1:1,15:17:46.97:379,47,0
chr10	63811495	.	AG	A	16785.49	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=18.997;DP=712;FS=0.595;HRun=1;HaplotypeScore=110.9270;InbreedingCoeff=0.9952;MQ=75.48;MQ0=0;MQRankSum=-3.863;QD=35.64;ReadPosRankSum=6.007;VQSLOD=4.3651;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,144,2221	0/0:15,0:15:45.15:0,45,719	0/0:19,0:19:57.18:0,57,864	0/0:17,0:17:48.12:0,48,670	1/1:0,21:21:56.09:719,56,0	1/1:0,23:23:66.21:841,66,0	1/1:0,25:25:72.23:918,72,0	0/0:34,0:34:99:0,102,1589	1/1:0,24:24:69.22:881,69,0	1/1:0,24:24:72.17:892,72,0	1/1:0,14:14:39.12:492,39,0	1/1:0,26:26:78.25:982,78,0	0/0:21,0:21:63.21:0,63,1004	1/1:0,16:16:45.14:576,45,0	1/1:0,31:31:84.27:1060,84,0	1/1:0,34:34:99:1296,102,0	1/1:0,36:36:99:1268,102,0	1/1:0,26:26:69.22:874,69,0	1/1:0,21:21:60.19:770,60,0	1/1:3,19:22:62.08:776,62,0	1/1:0,42:42:99:1456,114,0	0/0:23,0:23:69.19:0,69,1033	0/0:30,0:30:87.28:0,87,1364	0/0:32,0:32:96.31:0,96,1510	1/1:0,17:17:48.15:612,48,0	1/1:1,34:35:99:1238,99,0	1/1:1,27:28:78.25:980,78,0	1/1:0,6:6:12.04:154,12,0
chr10	63812956	.	G	GA	10378.72	PASS	AB=0.615;AC=37;AF=0.661;AN=56;BaseQRankSum=-11.157;DP=715;FS=5.289;HRun=10;HaplotypeScore=74.9559;InbreedingCoeff=0.8922;MQ=74.02;MQ0=0;MQRankSum=-0.806;QD=21.31;ReadPosRankSum=2.148;VQSLOD=5.9363;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:38:99:0,101,819	0/0:6,0:6:14.98:0,15,123	0/0:23,0:23:13.38:0,13,135	0/0:9,0:7:5.94:0,6,49	1/1:6,25:31:69.13:723,69,0	1/1:10,14:24:36.56:385,37,0	1/1:10,26:36:24.63:658,25,0	0/0:43,1:44:69.82:0,70,774	1/1:5,19:24:48.12:511,48,0	0/1:12,20:32:16.67:447,0,17	1/1:6,14:20:20.42:404,20,0	1/1:3,21:24:33.48:523,33,0	0/0:20,0:20:44.94:0,45,369	1/1:3,19:22:54.14:574,54,0	1/1:9,18:27:26.74:431,27,0	1/1:5,23:28:38.52:615,39,0	1/1:2,17:19:42.11:448,42,0	1/1:5,13:18:16.51:365,17,0	1/1:3,18:21:51.11:535,51,0	1/1:4,15:20:50.92:513,51,0	1/1:7,20:27:57.14:608,57,0	0/0:30,0:30:77.88:0,78,637	0/0:34,0:34:62.89:0,63,517	0/0:21,1:22:12.93:0,13,313	1/1:4,25:29:44.54:679,45,0	1/1:5,25:30:72.18:767,72,0	1/1:5,20:25:47.95:511,48,0	1/1:5,25:30:44.53:679,45,0
chr10	63813665	.	T	TG	19688.51	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-14.568;DP=685;FS=3.689;HRun=2;HaplotypeScore=65.9541;InbreedingCoeff=0.9994;MQ=84.64;MQ0=0;MQRankSum=-5.081;QD=40.35;ReadPosRankSum=2.716;VQSLOD=5.2726;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:90.29:0,90,1167	0/0:9,0:9:27.09:0,27,350	0/0:25,0:25:59.73:0,60,797	0/0:28,0:28:74.03:0,74,833	1/1:0,24:24:60.13:874,60,0	1/1:0,19:19:51.17:764,51,0	1/1:1,36:37:99:1619,108,0	0/0:19,0:19:57.17:0,57,727	1/1:0,26:26:78.26:1169,78,0	1/1:2,15:16:42.11:585,42,0	1/1:0,11:11:24.08:359,24,0	1/1:1,23:24:69.23:1034,69,0	0/0:20,0:20:57.19:0,57,740	1/1:2,33:35:93.31:1381,93,0	1/1:1,26:27:75.25:1124,75,0	1/1:1,38:39:99:1574,105,0	1/1:0,29:29:84.28:1259,84,0	1/1:0,21:21:57.19:854,57,0	1/1:1,15:16:45.15:665,45,0	1/1:0,16:16:45.10:630,45,0	1/1:2,64:66:99:2606,175,0	0/0:21,0:21:60.19:0,60,775	0/0:11,0:11:33.09:0,33,414	0/0:32,0:32:96.31:0,96,1247	1/1:1,21:22:54.18:809,54,0	1/1:3,22:25:30.27:943,30,0	1/1:0,21:21:56.79:854,57,0	1/1:0,13:13:39.13:585,39,0
chr10	63814666	.	GGAGGCA	G	9894.98	PASS	AC=34;AF=0.630;AN=54;BaseQRankSum=12.801;DP=554;FS=7.523;HRun=0;HaplotypeScore=125.0817;InbreedingCoeff=0.9569;MQ=62.10;MQ0=7;MQRankSum=-13.076;QD=29.10;ReadPosRankSum=2.363;VQSLOD=4.2184;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:54.19:0,54,1773	0/0:3,0:3:9.03:0,9,298	0/0:33,0:24:24.84:0,25,758	0/0:36,0:27:30.09:0,30,874	0/0:15,0:15:33.10:0,33,913	1/1:3,9:12:21.07:443,21,0	1/1:11,14:25:33.11:696,33,0	0/0:22,0:22:39.12:0,39,1104	1/1:5,20:25:48.16:1012,48,0	1/1:8,14:22:42.14:866,42,0	1/1:3,5:7:6.02:127,6,0	1/1:7,16:23:24.08:506,24,0	0/0:16,0:16:36.09:0,36,996	1/1:6,11:17:24.08:506,24,0	1/1:1,15:16:42.14:886,42,0	1/1:5,16:21:45.15:949,45,0	1/1:19,15:34:27.09:569,27,0	1/1:12,14:26:15.05:316,15,0	1/1:13,4:17:9.03:168,9,0	1/1:6,11:17:15.05:316,15,0	1/1:10,14:24:24.08:487,24,0	0/0:15,0:15:24.07:0,24,713	0/0:11,0:11:15.05:0,15,424	0/0:36,0:36:87.30:0,87,2665	1/1:2,11:13:30.06:589,30,0	1/1:10,12:22:33.09:635,33,0	1/1:2,16:18:39.13:823,39,0	./.
chr10	63817336	.	TC	T	13370.89	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=11.269;DP=596;FS=11.402;HRun=2;HaplotypeScore=62.2525;InbreedingCoeff=0.9974;MQ=86.62;MQ0=0;MQRankSum=-2.444;QD=34.55;ReadPosRankSum=4.107;VQSLOD=4.4750;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,141,2067	0/0:10,0:10:27.08:0,27,385	0/0:20,0:20:48.12:0,48,655	0/0:18,0:18:48.02:0,48,607	0/0:25,0:25:72.21:0,72,1036	1/1:0,18:18:51.17:661,51,0	1/1:1,19:20:51.17:662,51,0	0/0:22,0:22:54.18:0,54,805	1/1:0,23:23:63.20:817,63,0	1/1:0,18:18:51.14:634,51,0	1/1:1,18:19:45.15:583,45,0	1/1:1,21:22:54.18:700,54,0	0/0:15,0:15:42.14:0,42,628	1/1:1,12:13:30.10:389,30,0	1/1:0,26:26:69.22:895,69,0	1/1:0,27:27:78.25:1012,78,0	1/1:0,35:35:93.30:1206,93,0	1/1:0,24:24:66.21:856,66,0	1/1:2,16:18:45.14:584,45,0	1/1:0,16:16:42.09:526,42,0	1/1:1,33:34:96.31:1245,96,0	0/0:12,0:12:33.10:0,33,475	0/0:17,0:17:51.14:0,51,722	0/0:23,0:23:69.23:0,69,1026	1/1:0,22:22:57.18:733,57,0	1/1:2,18:20:51.16:662,51,0	1/1:0,27:27:78.25:1011,78,0	1/1:0,5:5:15.05:194,15,0
chr10	63818291	.	AAAAAAAAAAAGAAAAG	A	1295.85	PASS	AB=1.000;AC=34;AF=0.607;AN=56;BaseQRankSum=-2.596;DP=339;FS=6.362;HRun=0;HaplotypeScore=101.2697;InbreedingCoeff=0.5178;MQ=40.51;MQ0=23;MQRankSum=-0.596;QD=6.38;ReadPosRankSum=1.613;VQSLOD=0.6953;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:24:45.15:0,45,2293	0/0:6,0:5:15.05:0,15,787	0/0:18,0:2:5.98:0,6,83	0/0:20,0:3:3.90:0,4,55	1/1:23,0:22:23.63:240,24,0	1/1:6,11:16:4.26:122,4,0	0/1:11,0:9:99:110,0,101	0/0:28,0:24:63.19:0,63,2933	0/1:5,0:5:0:0,0,0	1/1:11,0:11:1.72:5,2,0	1/1:4,0:4:3.01:40,3,0	1/1:9,0:9:8.88:147,9,0	0/0:8,0:7:15.04:0,15,318	1/1:10,0:10:1.82:5,2,0	1/1:7,0:7:11.97:157,12,0	1/1:5,0:5:3.01:112,3,0	1/1:13,0:13:5.75:35,6,0	1/1:13,0:11:4.76:23,5,0	0/1:12,0:11:19.30:104,0,19	1/1:10,0:9:5.12:82,5,0	1/1:7,7:12:6.80:162,7,0	0/0:2,0:2:6.02:0,6,292	0/0:13,0:12:23.18:0,23,1059	0/0:13,0:12:5.81:0,6,329	1/1:11,0:11:11.56:65,12,0	1/1:12,0:11:8.76:39,9,0	1/1:6,0:6:6.30:25,6,0	0/1:10,0:5:0:0,0,0
chr10	63818294	.	AAAAAAAAGAAAAG	A	1653.20	PASS	AB=1.000;AC=36;AF=0.643;AN=56;BaseQRankSum=-2.716;DP=346;FS=0.000;HRun=0;HaplotypeScore=89.7230;InbreedingCoeff=0.5935;MQ=47.20;MQ0=21;MQRankSum=-1.409;QD=8.10;ReadPosRankSum=-1.473;VQSLOD=1.0175;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:25:48.14:0,48,1783	0/0:6,0:5:15.05:0,15,595	0/0:20,0:3:8.96:0,9,118	0/0:26,0:5:6.63:0,7,65	1/1:6,18:23:42.91:436,43,0	1/1:16,0:15:4.83:98,5,0	0/1:11,0:9:91.19:106,0,91	0/0:30,0:27:55.47:0,55,2206	0/1:5,0:5:0:0,0,0	1/1:11,0:11:2.70:9,3,0	1/1:8,0:8:14.98:173,15,0	1/1:10,0:10:11.89:166,12,0	0/1:7,0:6:4.39:4,0,147	1/1:8,0:8:2.37:8,2,0	1/1:7,0:7:13.12:143,13,0	1/1:5,0:5:3.01:92,3,0	1/1:11,0:11:6.32:36,6,0	1/1:12,0:10:5.31:26,5,0	1/1:10,0:9:8.20:119,8,0	1/1:10,0:9:8.19:123,8,0	1/1:14,0:12:7.59:139,8,0	0/0:4,0:4:11.91:0,12,295	0/0:13,0:12:25.28:0,25,846	0/0:14,0:13:6.25:0,6,299	1/1:10,0:10:11.80:75,12,0	1/1:11,0:10:10.40:49,10,0	1/1:6,0:6:8.11:32,8,0	0/1:8,0:4:0:0,0,0
chr10	63818304	.	AAAG	A	2712.23	PASS	AB=0.964;AC=37;AF=0.685;AN=54;BaseQRankSum=0.993;DP=371;FS=15.794;HRun=0;HaplotypeScore=65.9039;InbreedingCoeff=0.6012;MQ=65.19;MQ0=15;MQRankSum=0.350;QD=11.84;ReadPosRankSum=-5.757;VQSLOD=0.1622;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:28:15.50:0,16,310	0/0:6,0:6:2.12:0,2,103	0/0:30,0:10:5.05:0,5,175	0/0:38,0:13:2.12:0,2,43	1/1:19,0:18:33.51:211,34,0	1/1:11,0:11:2.98:22,3,0	1/1:15,0:14:1.43:183,1,0	0/1:29,4:32:99:261,0,283	./.	1/1:11,0:10:24.70:174,25,0	1/1:9,0:9:13.99:94,14,0	1/1:12,0:12:32.24:251,32,0	0/1:9,0:8:24.62:25,0,41	0/1:8,0:8:0:1,0,0	1/1:4,0:4:11.98:101,12,0	1/1:6,0:6:17.96:149,18,0	1/1:17,0:16:44.74:348,45,0	1/1:6,0:4:11.96:99,12,0	1/1:13,0:12:26.62:210,27,0	1/1:9,0:8:14.68:103,15,0	1/1:7,0:7:5.85:43,6,0	0/0:8,0:8:23.94:0,24,279	0/0:15,0:14:18.59:0,19,421	0/0:12,0:11:13.58:0,14,189	1/1:10,0:10:23.95:181,24,0	1/1:14,0:13:16.28:118,16,0	1/1:8,0:8:23.90:194,24,0	1/1:8,0:6:14.95:122,15,0
chr10	63818307	.	G	GA	943.71	PASS	AB=1.000;AC=33;AF=0.611;AN=54;BaseQRankSum=-1.912;DP=380;FS=4.016;HRun=12;HaplotypeScore=71.7044;InbreedingCoeff=0.4127;MQ=69.07;MQ0=12;MQRankSum=-0.653;QD=3.46;ReadPosRankSum=-3.973;VQSLOD=-0.3466;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:13,18:29:13.20:221,13,0	1/1:4,3:7:17.70:141,18,0	0/0:31,0:11:8.42:0,8,103	0/1:42,0:16:21.37:21,0,27	1/1:20,0:19:0.06:49,0,0	0/0:11,0:11:2.04:0,2,6	1/1:15,0:14:9.49:77,9,0	1/1:31,1:34:27.60:215,28,0	./.	1/1:12,0:11:7.86:37,8,0	1/1:9,0:9:2.06:17,2,0	0/0:12,0:12:0.46:0,0,3	0/1:7,0:7:0.77:19,0,1	0/1:5,0:5:0:0,0,0	0/1:4,0:4:1.39:18,0,1	0/0:6,0:6:0.59:0,1,4	1/1:19,0:18:1.22:3,1,0	1/1:7,0:5:3.71:22,4,0	1/1:14,0:13:6.05:65,6,0	1/1:10,0:9:8.90:61,9,0	0/1:8,0:8:1.27:15,0,1	0/0:6,0:8:18.99:0,19,121	0/0:14,0:13:17.71:0,18,131	0/0:11,0:11:11.56:0,12,87	1/1:9,0:9:5.03:28,5,0	0/0:12,0:12:0.55:0,1,1	1/1:10,0:10:10.76:73,11,0	1/1:8,0:6:2.32:6,2,0
chr10	63821253	.	CGGAGAGATCCAACTTCCGAA	C	24554.73	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=15.989;DP=583;FS=6.169;HRun=0;HaplotypeScore=317.2408;InbreedingCoeff=0.9620;MQ=90.26;MQ0=0;MQRankSum=-14.369;QD=77.22;ReadPosRankSum=5.593;VQSLOD=2.9570;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:84.27:0,84,6840	0/0:8,0:8:15.05:0,15,1160	0/0:28,0:27:47.82:0,48,2863	0/0:29,0:29:54.62:0,55,3605	0/0:24,0:24:60.19:0,60,4653	1/1:9,16:25:33.11:1787,33,0	1/1:6,9:15:27.09:1461,27,0	0/0:37,0:37:87.30:0,87,6009	1/1:8,11:20:33.11:1787,33,0	1/1:8,9:17:24.07:1051,24,0	1/1:10,4:14:12.04:328,12,0	1/1:5,17:22:36.12:1949,36,0	0/0:30,0:30:81.26:0,81,6638	1/1:5,13:18:39.13:2110,39,0	1/1:13,18:31:51.17:2761,51,0	1/1:9,21:30:48.05:2599,48,0	1/1:5,10:15:21.07:1091,21,0	1/1:1,7:8:19.31:1066,19,0	1/1:10,10:20:27.06:1206,27,0	1/1:0,4:4:12.04:517,12,0	1/1:10,5:15:6.02:256,6,0	0/0:28,0:28:66.23:0,66,5040	0/0:15,0:15:42.14:0,42,3408	0/0:26,0:26:57.20:0,57,4868	1/1:3,7:10:9.03:487,9,0	1/1:7,10:17:30.08:1250,30,0	1/1:10,13:23:27.09:1386,27,0	1/1:2,12:14:27.09:1462,27,0
chr10	63821543	.	TGCAG	T	7270.90	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=7.942;DP=326;FS=4.339;HRun=0;HaplotypeScore=67.0245;InbreedingCoeff=0.9445;MQ=80.29;MQ0=0;MQRankSum=-4.570;QD=34.14;ReadPosRankSum=2.733;VQSLOD=4.5825;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:48.16:0,48,1219	0/0:8,0:8:21.07:0,21,513	0/0:19,0:19:45.15:0,45,1102	0/0:9,0:9:18.06:0,18,450	1/1:3,18:21:36.04:561,36,0	1/1:4,6:10:18.06:313,18,0	1/1:5,6:11:18.06:288,18,0	0/0:19,0:19:45.15:0,45,1142	1/1:0,6:6:12.04:196,12,0	1/1:3,12:15:36.11:599,36,0	1/1:1,10:11:30.10:496,30,0	1/1:2,5:7:15.05:236,15,0	0/0:7,0:7:15.05:0,15,381	1/1:2,9:11:24.08:405,24,0	1/1:1,7:8:21.07:365,21,0	1/1:2,6:8:18.06:268,18,0	1/1:4,16:20:33.11:574,33,0	1/1:3,5:8:12.04:209,12,0	1/1:7,7:14:21.07:335,21,0	1/1:1,15:16:45.12:702,45,0	1/1:2,3:5:3.01:52,3,0	0/0:10,0:10:27.09:0,27,681	0/0:9,0:9:24.08:0,24,605	0/0:9,0:9:18.06:0,18,457	1/1:1,13:14:39.13:627,39,0	1/1:3,9:12:27.08:442,27,0	1/1:3,8:11:24.08:405,24,0	1/1:1,4:5:12.04:198,12,0
chr10	63821994	.	GCAA	G	659.16	PASS	AB=0.790;AC=12;AF=0.214;AN=56;BaseQRankSum=11.843;DP=490;FS=0.000;HRun=0;HaplotypeScore=114.5599;InbreedingCoeff=-0.2973;MQ=60.65;MQ0=8;MQRankSum=-8.128;QD=3.09;ReadPosRankSum=3.053;VQSLOD=1.5100;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:95.35:0,95,1565	0/0:9,0:9:27.09:0,27,463	0/0:27,0:16:48.08:0,48,580	0/0:30,0:18:47.28:0,47,574	0/0:9,0:11:27.08:0,27,329	0/1:18,5:23:4.95:5,0,392	0/1:21,2:24:78.65:79,0,429	0/0:20,0:19:57.19:0,57,742	0/1:4,6:10:60.79:61,0,91	0/1:13,1:15:35.73:36,0,307	0/0:6,1:7:15.13:0,15,181	0/1:9,8:17:99:113,0,185	0/0:14,0:14:42.14:0,42,849	0/1:8,4:12:50.88:51,0,146	0/1:12,5:17:25.93:26,0,317	0/1:17,7:24:99:171,0,262	0/0:16,1:17:0.08:0,0,460	0/1:15,4:19:53.74:54,0,321	0/1:12,3:13:77.51:78,0,272	0/0:11,1:12:1.97:0,2,282	0/0:20,2:22:13.40:0,13,415	0/0:21,0:20:54.18:0,54,910	0/0:12,0:12:33.11:0,33,567	0/0:20,0:20:60.20:0,60,1302	0/0:6,2:8:12.61:0,13,205	0/1:9,1:9:16.33:16,0,245	0/1:13,13:26:99:118,0,364	0/0:10,1:11:10.26:0,10,313
chr10	63821998	.	GCAAGC	G	1758.65	PASS	AB=0.819;AC=17;AF=0.304;AN=56;BaseQRankSum=13.706;DP=487;FS=0.882;HRun=0;HaplotypeScore=126.6631;InbreedingCoeff=-0.4399;MQ=62.12;MQ0=8;MQRankSum=-9.142;QD=6.66;ReadPosRankSum=4.820;VQSLOD=2.2586;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:96.78:0,97,1826	0/0:9,0:9:27.09:0,27,508	0/0:30,0:19:56.73:0,57,705	0/0:30,0:18:51.15:0,51,717	0/0:11,0:11:26.48:0,26,189	0/1:17,5:22:85.15:85,0,179	0/1:19,2:21:99:168,0,163	0/0:20,0:19:57.17:0,57,822	0/1:7,6:13:73.10:138,0,73	0/1:13,1:14:57.81:58,0,167	0/1:6,1:7:14.20:14,0,96	0/1:7,8:15:59.30:209,0,59	0/0:15,0:15:45.15:0,45,1064	0/1:7,4:11:71.42:140,0,71	0/1:10,5:15:99:114,0,129	0/1:15,7:22:99:289,0,150	0/0:15,1:16:5.46:0,5,244	0/1:14,4:18:99:172,0,146	0/1:15,3:15:99:99,0,154	0/1:11,1:12:27.79:28,0,171	0/1:17,2:19:31.19:31,0,195	0/0:22,0:21:57.19:0,57,1145	0/0:11,0:11:30.09:0,30,626	0/0:22,0:22:66.18:0,66,1689	0/1:6,2:8:12.33:12,0,106	0/1:11,1:11:37.44:37,0,132	0/1:13,13:26:99:308,0,154	0/1:10,1:11:16.01:16,0,92
chr10	63822722	.	C	CA	3494.98	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=8.935;DP=305;FS=21.301;HRun=0;HaplotypeScore=45.0960;InbreedingCoeff=0.8605;MQ=73.71;MQ0=8;MQRankSum=-9.090;QD=21.98;ReadPosRankSum=-1.872;VQSLOD=2.1386;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:81.27:0,81,1128	0/0:3,0:3:6.02:0,6,84	0/0:17,0:15:42.09:0,42,528	0/0:18,0:16:31.37:0,31,444	1/1:0,6:6:2.97:20,3,0	1/1:1,9:10:20.93:227,21,0	1/1:1,8:8:14.98:187,15,0	0/0:19,0:19:57.18:0,57,782	1/1:0,2:2:5.88:36,6,0	1/1:1,2:3:6.01:69,6,0	1/1:0,5:5:8.99:109,9,0	1/1:0,9:9:8.89:73,9,0	0/0:14,0:14:39.07:0,39,504	1/1:1,6:6:12.01:148,12,0	1/1:1,14:15:20.89:212,21,0	1/1:1,13:14:36.05:478,36,0	1/1:2,9:9:18.04:214,18,0	1/1:0,10:10:27.04:371,27,0	1/1:2,8:9:27.09:387,27,0	1/1:0,9:9:14.93:140,15,0	1/1:3,8:9:5.82:57,6,0	0/0:10,0:10:27.08:0,27,362	0/0:13,0:13:39.13:0,39,540	0/0:21,0:21:63.19:0,63,847	1/1:3,5:7:8.96:87,9,0	1/1:0,8:8:24.08:350,24,0	1/1:0,5:5:12.04:178,12,0	1/1:1,6:6:11.99:152,12,0
chr10	63825816	.	CTA	C	18353.62	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=11.859;DP=724;FS=2.976;HRun=0;HaplotypeScore=90.5544;InbreedingCoeff=0.9974;MQ=83.24;MQ0=2;MQRankSum=-5.136;QD=36.78;ReadPosRankSum=7.147;VQSLOD=7.0414;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,129,2297	0/0:15,0:15:36.12:0,36,670	0/0:19,0:19:57.15:0,57,975	0/0:22,0:22:62.81:0,63,1044	1/1:2,23:25:63.21:927,63,0	1/1:0,20:20:54.18:785,54,0	1/1:1,27:28:63.21:927,63,0	0/0:41,0:41:99:0,117,2057	1/1:2,25:27:69.23:1014,69,0	1/1:1,24:25:72.13:994,72,0	1/1:1,13:14:30.10:441,30,0	1/1:1,34:35:87.29:1280,87,0	0/0:21,0:21:63.22:0,63,1175	1/1:1,26:26:69.23:1015,69,0	1/1:0,29:29:75.25:1104,75,0	1/1:0,23:23:63.21:927,63,0	1/1:0,30:29:75.25:1104,75,0	1/1:3,34:38:90.30:1322,90,0	1/1:0,22:22:63.21:927,63,0	1/1:1,17:18:48.16:706,48,0	1/1:3,41:44:99:1589,108,0	0/0:26,0:26:75.21:0,75,1307	0/0:15,0:15:45.12:0,45,771	0/0:21,0:21:63.19:0,63,1146	1/1:1,25:26:60.20:883,60,0	1/1:0,26:26:69.22:996,69,0	1/1:2,30:32:81.27:1192,81,0	1/1:0,10:10:15.05:221,15,0
chr10	63828526	.	A	AG	20163.17	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-15.450;DP=745;FS=0.303;HRun=1;HaplotypeScore=59.9428;InbreedingCoeff=0.9983;MQ=69.73;MQ0=0;MQRankSum=-0.912;QD=38.26;ReadPosRankSum=3.181;VQSLOD=5.4012;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,141,1764	0/0:11,0:11:33.07:0,33,398	0/0:17,0:16:38.85:0,39,458	0/0:10,0:10:23.02:0,23,267	1/1:2,21:23:57.12:821,57,0	1/1:3,20:23:48.16:713,48,0	1/1:0,25:25:69.18:1007,69,0	0/0:23,0:23:60.16:0,60,710	1/1:1,36:37:99:1525,102,0	1/1:0,24:24:72.23:1053,72,0	1/1:0,26:26:75.19:1095,75,0	1/1:0,38:38:99:1481,99,0	0/0:18,0:18:51.16:0,51,650	1/1:2,18:20:42.14:628,42,0	1/1:1,49:50:99:1750,117,0	1/1:1,33:34:99:1469,99,0	1/1:1,29:30:81.27:1212,81,0	1/1:1,25:26:65.43:945,65,0	1/1:2,26:28:75.18:1045,75,0	1/1:1,26:27:75.13:1041,75,0	1/1:0,28:28:60.20:898,60,0	0/0:35,0:35:99:0,102,1276	0/0:22,0:22:63.18:0,63,778	0/0:30,0:30:90.27:0,90,1136	1/1:0,24:24:69.23:1029,69,0	1/1:0,30:30:90.22:1258,90,0	1/1:1,25:25:63.21:923,63,0	1/1:0,8:8:18.06:269,18,0
chr10	63830043	.	TAAAA	T	11897.38	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=4.725;DP=593;FS=8.168;HRun=15;HaplotypeScore=113.6508;InbreedingCoeff=0.9912;MQ=59.92;MQ0=7;MQRankSum=-2.409;QD=28.19;ReadPosRankSum=8.081;VQSLOD=3.0538;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:16:33.10:0,33,500	0/0:4,0:15:27.97:0,28,337	0/0:22,0:14:21:0,21,355	0/0:12,0:9:14.98:0,15,247	1/1:4,13:19:33.19:446,33,0	1/1:1,20:23:61.39:786,61,0	1/1:1,11:13:36.07:473,36,0	0/0:37,0:37:81.28:0,81,1719	1/1:1,26:27:63.19:858,63,0	1/1:5,26:32:81.14:1067,81,0	1/1:3,19:23:55.32:739,55,0	1/1:5,23:28:54.04:736,54,0	0/0:17,0:18:36:0,36,736	1/1:1,15:16:42.11:572,42,0	1/1:6,20:25:42.05:572,42,0	1/1:3,29:31:75.18:1022,75,0	1/1:4,22:25:50.98:695,51,0	1/1:3,16:18:42.06:572,42,0	1/1:6,5:11:14.92:204,15,0	1/1:6,22:28:61.24:814,61,0	1/1:1,5:8:14.95:170,15,0	0/0:16,0:17:48.16:0,48,1018	0/0:16,0:19:44.85:0,45,868	0/0:11,0:12:33.10:0,33,687	1/1:7,12:20:31.21:412,31,0	1/1:5,15:21:48.05:614,48,0	1/1:12,23:35:56.97:776,57,0	1/1:0,12:12:27.09:368,27,0
chr10	63830816	.	CG	C	17716.02	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=16.001;DP=732;FS=0.000;HRun=1;HaplotypeScore=100.5193;InbreedingCoeff=1.0000;MQ=90.48;MQ0=0;MQRankSum=-4.522;QD=39.63;ReadPosRankSum=4.403;VQSLOD=4.9198;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,153,2410	0/0:11,0:11:33.11:0,33,523	0/0:32,0:32:93.26:0,93,1432	0/0:26,0:26:65.04:0,65,1066	0/0:23,0:23:69.21:0,69,1077	1/1:0,18:18:54.18:755,54,0	1/1:0,23:23:66.22:923,66,0	0/0:36,0:36:99:0,108,1625	1/1:0,20:20:54.18:755,54,0	1/1:0,33:33:99:1384,99,0	1/1:0,25:25:66.22:923,66,0	1/1:0,22:22:63.21:881,63,0	0/0:26,0:26:78.27:0,78,1240	1/1:0,26:26:75.25:1049,75,0	1/1:0,29:29:78.26:1087,78,0	1/1:0,25:25:72.24:1007,72,0	1/1:0,26:26:66.22:923,66,0	1/1:0,18:18:54.18:755,54,0	1/1:0,21:21:60.20:839,60,0	1/1:0,18:18:51.17:710,51,0	1/1:0,55:55:99:2056,147,0	0/0:27,0:27:81.27:0,81,1272	0/0:20,0:20:57.19:0,57,910	0/0:31,0:31:90.29:0,90,1412	1/1:0,22:22:66.22:923,66,0	1/1:0,32:32:96.30:1323,96,0	1/1:0,21:21:63.21:878,63,0	1/1:0,13:13:39.13:545,39,0
chr10	63832088	.	AACCC	A	5572.95	PASS	AB=0.971;AC=27;AF=0.482;AN=56;BaseQRankSum=13.838;DP=494;FS=3.817;HRun=0;HaplotypeScore=142.5526;InbreedingCoeff=0.2263;MQ=70.02;MQ0=1;MQRankSum=-8.128;QD=15.19;ReadPosRankSum=12.196;VQSLOD=2.6267;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:22:56.98:0,57,779	0/0:3,0:3:9.03:0,9,155	0/0:31,0:23:45.45:0,45,787	0/0:12,0:11:15.94:0,16,257	0/1:16,1:17:48:158,0,48	0/1:18,1:19:57.84:175,0,58	1/1:25,0:25:23.03:439,23,0	0/0:22,0:22:57.08:0,57,704	0/1:22,0:22:0.59:333,0,1	0/1:16,0:16:75.31:221,0,75	1/1:6,0:6:17.87:164,18,0	0/1:28,0:28:24.18:404,0,24	0/0:11,0:11:29.25:0,29,637	1/1:28,0:28:75.19:647,75,0	1/1:29,2:31:19.74:542,20,0	0/1:18,0:18:26.83:290,0,27	1/1:22,0:22:23.62:298,24,0	0/1:12,0:12:42.89:105,0,43	0/1:14,0:14:36.75:187,0,37	0/1:7,2:9:3.91:168,0,4	0/1:31,0:31:99:228,0,138	0/0:7,0:7:18.04:0,18,272	0/0:5,0:5:5.99:0,6,50	0/0:13,0:13:39.05:0,39,795	1/1:19,0:19:36.83:286,37,0	1/1:20,1:21:36.61:443,37,0	0/1:26,1:26:75.38:441,0,75	1/1:2,0:2:5.94:44,6,0
chr10	63832089	.	ACCCC	A	11552.28	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=7.118;DP=492;FS=1.615;HRun=12;HaplotypeScore=122.6104;InbreedingCoeff=0.9165;MQ=68.27;MQ0=1;MQRankSum=-8.048;QD=31.48;ReadPosRankSum=7.216;VQSLOD=3.1368;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:23:44.89:0,45,560	0/0:2,0:3:9:0,9,119	0/0:26,0:22:7.94:0,8,599	0/0:11,0:10:10.35:0,10,182	1/1:3,14:17:30.02:386,30,0	1/1:3,16:19:29.98:403,30,0	1/1:3,22:25:57.10:810,57,0	0/0:19,0:22:29.97:0,30,353	1/1:2,20:22:51.11:744,51,0	1/1:5,11:16:33.04:497,33,0	1/1:0,6:6:18.06:272,18,0	1/1:5,23:28:66.09:947,66,0	0/0:12,0:12:27.09:0,27,563	1/1:0,28:28:78.22:1151,78,0	1/1:5,26:31:75.14:1082,75,0	1/1:3,15:18:42.13:633,42,0	1/1:3,19:22:42.12:636,42,0	1/1:3,9:12:18.02:271,18,0	1/1:4,10:14:30.07:453,30,0	1/1:5,4:9:18.06:271,18,0	1/1:7,24:31:41.95:610,42,0	0/0:7,0:7:12.03:0,12,185	0/0:4,0:4:0:0,0,0	0/0:13,0:13:30.10:0,30,641	1/1:0,18:19:47.97:603,48,0	1/1:2,19:21:57.15:829,57,0	1/1:7,20:27:57.15:862,57,0	1/1:0,2:2:6.02:91,6,0
chr10	63832639	.	CAAACCAAAAAAAAA	C	775.11	PASS	AB=0.981;AC=16;AF=0.286;AN=56;BaseQRankSum=-7.101;DP=411;FS=20.733;HRun=0;HaplotypeScore=193.3713;InbreedingCoeff=-0.2802;MQ=52.52;MQ0=9;MQRankSum=5.274;QD=3.80;ReadPosRankSum=-0.380;VQSLOD=1.5235;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:24:34.23:0,34,1619	0/0:2,0:3:6.02:0,6,218	0/0:49,0:11:9.79:0,10,254	0/0:42,0:16:20.70:0,21,347	0/1:9,5:14:8.04:475,0,8	0/0:9,0:9:25.22:0,25,716	0/1:10,0:10:38.47:38,0,149	0/0:21,0:20:34.49:0,34,770	0/1:12,0:12:69.58:70,0,523	0/1:11,0:11:20.87:21,0,246	0/0:15,0:14:19.07:0,19,515	0/1:16,0:16:20.93:21,0,543	0/0:5,0:5:6:0,6,201	0/0:6,0:6:5.48:0,5,147	0/1:11,0:11:3.60:4,0,442	0/1:14,0:12:3.50:4,0,432	0/1:22,0:20:49.45:49,0,705	0/1:17,0:16:7.63:8,0,450	0/1:23,0:22:36.19:36,0,483	0/1:13,0:13:90.27:90,0,208	1/1:2,0:2:2.50:9,2,0	0/1:9,0:9:11.16:11,0,429	0/0:2,0:2:6.02:0,6,230	0/0:12,0:12:4.34:0,4,167	0/1:16,0:16:36.10:36,0,447	0/1:14,0:14:51.16:51,0,335	0/0:15,0:15:11.97:0,12,787	0/0:3,0:3:9.03:0,9,293
chr10	63832642	.	ACC	A	1993.78	PASS	AB=0.943;AC=38;AF=0.679;AN=56;BaseQRankSum=3.245;DP=409;FS=3.148;HRun=2;HaplotypeScore=114.4183;InbreedingCoeff=0.0983;MQ=51.29;MQ0=11;MQRankSum=-0.649;QD=6.76;ReadPosRankSum=1.074;VQSLOD=0.4873;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:23,1:23:51.89:148,0,52	0/0:3,0:3:0.07:0,0,3	0/0:56,0:11:1.45:0,1,144	0/0:47,0:16:0.89:0,1,142	0/1:14,0:14:22.46:66,0,22	1/1:7,2:9:23.34:176,23,0	1/1:7,1:8:4.68:23,5,0	0/1:18,2:20:34.06:108,0,34	1/1:12,1:13:11.21:132,11,0	1/1:10,0:10:11.20:50,11,0	1/1:12,1:12:23.53:113,24,0	0/1:13,1:14:19.06:102,0,19	0/1:6,0:6:1.65:2,0,9	0/0:5,0:5:2.18:0,2,36	1/1:11,0:11:19.90:112,20,0	1/1:13,1:12:13.08:97,13,0	0/1:20,3:21:13.88:161,0,14	1/1:18,0:17:21.31:127,21,0	1/1:20,1:20:18.83:172,19,0	1/1:12,0:12:11.24:53,11,0	1/1:1,0:1:2.60:10,3,0	0/1:6,0:6:17.01:35,0,17	0/0:2,0:2:0.27:0,0,1	0/1:10,2:12:7.86:22,0,8	1/1:13,1:15:23.91:180,24,0	1/1:13,0:13:8.25:76,8,0	1/1:14,1:15:20.42:136,20,0	1/1:3,0:3:8.54:43,9,0
chr10	63832661	.	AAC	A	5178.30	PASS	AB=1.000;AC=42;AF=0.750;AN=56;BaseQRankSum=5.433;DP=536;FS=4.878;HRun=0;HaplotypeScore=131.1393;InbreedingCoeff=0.5685;MQ=47.83;MQ0=24;MQRankSum=-6.586;QD=12.07;ReadPosRankSum=1.900;VQSLOD=4.6368;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:24:2.93:3,0,215	0/0:5,0:5:7.63:0,8,114	0/1:85,0:17:22.18:22,0,42	0/0:76,0:23:10.58:0,11,71	1/1:25,0:25:42.74:295,43,0	1/1:8,6:12:32.97:321,33,0	1/1:4,1:5:11.93:97,12,0	0/1:26,0:26:57.65:58,0,225	1/1:6,5:11:29.90:271,30,0	1/1:11,2:13:28.72:243,29,0	1/1:6,14:20:38.65:359,39,0	1/1:6,6:11:29.93:297,30,0	0/0:13,0:12:26.56:0,27,196	1/1:4,1:4:8.95:74,9,0	1/1:4,10:14:26.82:264,27,0	1/1:8,4:10:24:239,24,0	1/1:9,5:12:30:300,30,0	1/1:4,14:17:20.90:195,21,0	1/1:13,16:25:43.30:481,43,0	1/1:2,7:8:11.73:118,12,0	1/1:2,0:1:3.01:31,3,0	0/0:7,0:7:7.32:0,7,120	0/0:6,0:6:12.82:0,13,164	0/1:11,0:11:13.82:14,0,31	1/1:7,13:20:30.40:263,30,0	1/1:18,5:23:62.15:490,62,0	1/1:20,6:25:65.59:541,66,0	1/1:7,3:10:23.80:201,24,0
chr10	63832662	.	AC	A	4219.70	PASS	AB=0.970;AC=43;AF=0.768;AN=56;BaseQRankSum=5.999;DP=529;FS=11.736;HRun=1;HaplotypeScore=126.6529;InbreedingCoeff=0.4285;MQ=46.92;MQ0=24;MQRankSum=-6.350;QD=9.84;ReadPosRankSum=3.082;VQSLOD=1.6998;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:23:39.18:39,0,127	0/0:5,0:5:7.59:0,8,94	0/1:83,2:17:21.69:22,0,29	0/0:75,0:22:9.81:0,10,53	1/1:23,0:23:46.96:270,47,0	1/1:14,0:12:32.73:233,33,0	1/1:5,0:5:11.84:78,12,0	0/1:28,0:28:51.93:52,0,261	1/1:11,0:11:29.74:216,30,0	1/1:11,2:13:29.44:227,29,0	1/1:19,1:20:43.19:298,43,0	1/1:12,0:11:29.75:218,30,0	0/0:11,2:12:26.38:0,26,170	1/1:5,0:4:8.92:61,9,0	1/1:13,1:14:26.61:187,27,0	1/1:9,1:8:23.86:180,24,0	1/1:14,0:12:29.76:212,30,0	1/1:17,0:17:20.78:143,21,0	1/1:27,1:24:44.75:391,45,0	1/1:8,1:8:11.75:80,12,0	1/1:1,1:1:3.01:30,3,0	0/1:6,1:7:11.89:12,0,91	0/0:6,0:6:12.75:0,13,123	0/1:11,0:11:23.74:24,0,28	1/1:20,0:20:30.94:205,31,0	1/1:23,0:23:61.95:425,62,0	1/1:24,1:24:62.43:457,62,0	1/1:10,0:10:23.70:162,24,0
chr10	63832663	.	CA	C	390.21	PASS	AB=1.000;AC=30;AF=0.536;AN=56;BaseQRankSum=4.104;DP=539;FS=1.513;HRun=18;HaplotypeScore=147.0866;InbreedingCoeff=0.3938;MQ=46.76;MQ0=24;MQRankSum=-5.817;QD=1.23;ReadPosRankSum=0.449;VQSLOD=-0.6422;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:52.37:0,52,471	0/0:5,0:5:14.88:0,15,176	0/0:82,0:18:6.40:0,6,79	0/1:77,0:23:6.75:7,0,47	1/1:11,13:24:30.23:363,30,0	0/1:14,0:12:0.60:2,0,1	1/1:5,0:5:1.30:4,1,0	0/0:28,0:28:55.97:0,56,620	1/1:11,0:11:4.02:16,4,0	0/1:13,0:13:6.62:7,0,13	0/1:20,0:20:3.74:4,0,15	1/1:12,0:11:3.40:15,3,0	0/0:13,0:12:27.08:0,27,335	1/1:6,0:5:0.16:1,0,0	1/1:14,0:14:3.93:25,4,0	1/1:10,0:8:3.11:13,3,0	1/1:15,0:13:1.19:7,1,0	0/1:19,0:19:1.58:6,0,2	0/1:31,0:25:4.55:5,0,58	1/1:9,0:8:0.06:1,0,0	1/1:2,0:1:2.60:10,3,0	0/0:7,0:7:6.66:0,7,159	0/0:6,0:6:18.02:0,18,216	0/0:11,0:11:14.36:0,14,120	0/0:22,0:22:6.90:0,7,38	0/0:23,0:23:0.47:0,0,3	1/1:25,0:24:8.58:45,9,0	1/1:10,0:10:1.44:14,1,0
chr10	63832696	.	C	CAA	2849.20	PASS	AB=0.948;AC=45;AF=0.804;AN=56;BaseQRankSum=0.752;DP=505;FS=7.099;HRun=15;HaplotypeScore=130.2129;InbreedingCoeff=0.4786;MQ=56.70;MQ0=8;MQRankSum=-3.035;QD=6.14;ReadPosRankSum=0.270;VQSLOD=0.8017;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,14:24:37.24:358,37,0	1/1:4,2:6:14.92:115,15,0	0/1:48,0:21:12.93:19,0,13	0/1:53,0:16:2.06:2,0,8	1/1:24,0:25:20.76:156,21,0	1/1:7,9:18:17.35:156,17,0	1/1:7,1:10:14.32:124,14,0	0/0:13,0:22:25.91:0,26,107	1/1:16,0:16:20.79:171,21,0	1/1:14,3:18:20.40:209,20,0	1/1:20,4:25:19.85:168,20,0	0/1:9,0:10:11.67:76,0,12	0/1:13,0:13:0:1,0,0	1/1:3,1:3:2.84:14,3,0	1/1:11,1:13:17.90:147,18,0	1/1:6,4:11:15.24:144,15,0	1/1:9,11:20:8.28:53,8,0	1/1:13,1:13:18.36:156,18,0	1/1:28,0:25:26.02:305,26,0	1/1:8,0:9:8.92:63,9,0	1/1:1,0:6:5.34:28,5,0	0/0:8,0:9:14.51:0,15,102	0/0:8,0:9:14.48:0,14,104	0/1:8,0:10:4.50:4,0,17	1/1:11,2:15:13.90:131,14,0	1/1:18,1:26:1.24:162,1,0	1/1:18,8:27:14.28:138,14,0	1/1:7,4:11:9.03:108,9,0
chr10	63833515	.	AT	A	9901.07	PASS	AB=0.909;AC=39;AF=0.696;AN=56;BaseQRankSum=10.614;DP=594;FS=2.104;HRun=9;HaplotypeScore=59.5157;InbreedingCoeff=0.9394;MQ=79.65;MQ0=0;MQRankSum=-2.216;QD=22.87;ReadPosRankSum=2.216;VQSLOD=5.8576;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:72.21:0,72,831	0/1:9,1:10:0.39:0,0,241	0/0:18,0:18:35.64:0,36,362	0/0:10,0:10:11.38:0,11,134	1/1:1,17:18:45.02:412,45,0	1/1:0,18:18:54.03:494,54,0	1/1:1,15:16:36.02:330,36,0	0/0:30,1:31:47.75:0,48,804	1/1:1,19:20:51.03:467,51,0	1/1:4,22:26:42.75:578,43,0	1/1:2,10:12:30.02:275,30,0	1/1:3,21:24:60.02:549,60,0	0/0:16,0:16:39.12:0,39,450	1/1:5,21:26:60.02:549,60,0	1/1:2,16:18:48.02:439,48,0	1/1:3,24:27:72.04:659,72,0	1/1:3,24:27:66.03:604,66,0	1/1:4,21:25:63.03:577,63,0	1/1:3,17:20:51.02:467,51,0	1/1:2,26:28:78.04:714,78,0	1/1:2,22:24:60.03:549,60,0	0/0:22,0:22:45.12:0,45,510	0/0:17,0:17:42.11:0,42,476	0/0:20,2:22:8.25:0,8,603	1/1:1,12:13:36.02:330,36,0	1/1:5,26:31:78.02:708,78,0	1/1:3,26:29:75.04:686,75,0	1/1:1,20:21:28.42:515,28,0
chr10	63834279	.	GATTTAT	G	23734.91	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=14.080;DP=609;FS=4.424;HRun=0;HaplotypeScore=140.4339;InbreedingCoeff=0.9906;MQ=67.40;MQ0=0;MQRankSum=-15.457;QD=57.61;ReadPosRankSum=3.981;VQSLOD=4.8072;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:75.24:0,75,2630	0/0:13,0:13:36.04:0,36,1205	0/0:29,0:28:80.77:0,81,2393	0/0:21,0:18:47.54:0,48,1161	1/1:0,25:25:72.05:1434,72,0	1/1:0,18:17:45.15:1141,45,0	1/1:0,15:15:42.14:1068,42,0	0/0:37,0:37:99:0,111,3750	1/1:0,26:26:48.16:1122,48,0	1/1:0,39:39:99:2558,114,0	1/1:0,32:32:86.74:1614,87,0	1/1:0,11:11:30.10:764,30,0	0/0:19,0:19:57.18:0,57,1962	1/1:0,22:22:48.16:1221,48,0	1/1:0,25:25:51.18:1273,51,0	1/1:0,20:20:48.16:1171,48,0	1/1:0,23:23:36.12:915,36,0	1/1:1,11:12:27.09:639,27,0	1/1:0,20:20:60.16:1234,60,0	1/1:0,23:23:66.16:1546,66,0	1/1:0,7:7:9.03:201,9,0	0/0:23,0:23:69.19:0,69,2279	0/0:16,0:16:48.14:0,48,1596	0/0:13,0:13:36.07:0,36,1125	1/1:0,17:17:42.14:994,42,0	1/1:0,30:30:90.27:2063,90,0	1/1:0,30:30:66.23:1654,66,0	1/1:0,17:17:45.15:1124,45,0
chr10	63834480	.	T	TTTA	16575.73	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-11.635;DP=543;FS=5.417;HRun=0;HaplotypeScore=64.9694;InbreedingCoeff=0.9853;MQ=67.06;MQ0=2;MQRankSum=-4.335;QD=44.44;ReadPosRankSum=3.822;VQSLOD=5.8879;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:72.18:0,72,994	0/0:10,0:9:15.05:0,15,224	0/0:14,0:15:23.01:0,23,324	0/0:9,0:9:18.06:0,18,246	1/1:4,19:23:54.14:1088,54,0	1/1:1,19:20:48.16:1005,48,0	1/1:4,7:11:21.07:428,21,0	0/0:34,0:34:66.21:0,66,952	1/1:5,19:24:63.22:1280,63,0	1/1:9,16:26:30.20:904,30,0	1/1:6,10:16:26.96:476,27,0	1/1:4,13:17:39.13:792,39,0	0/0:21,0:21:57.18:0,57,814	1/1:3,9:13:27.09:564,27,0	1/1:1,26:28:78.22:1579,78,0	1/1:3,20:23:60.21:1232,60,0	1/1:5,20:26:54.14:1088,54,0	1/1:1,4:5:9.03:188,9,0	1/1:1,17:18:48.08:846,48,0	1/1:6,13:19:36.09:699,36,0	1/1:5,14:18:30.02:542,30,0	0/0:15,0:15:36.12:0,36,538	0/0:24,0:24:60.20:0,60,897	0/0:14,0:14:33.11:0,33,493	1/1:2,16:19:42.10:832,42,0	1/1:5,21:26:66.23:1336,66,0	1/1:7,20:27:57.20:1193,57,0	1/1:1,11:12:24.08:502,24,0
chr10	63834809	.	GTCTC	G	7793.97	PASS	AB=0.722;AC=39;AF=0.696;AN=56;BaseQRankSum=5.100;DP=629;FS=18.340;HRun=0;HaplotypeScore=136.8966;InbreedingCoeff=0.7424;MQ=57.89;MQ0=15;MQRankSum=-0.249;QD=18.83;ReadPosRankSum=-1.518;VQSLOD=3.1804;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:40,0:40:7.56:8,0,177	0/0:10,0:10:9.49:0,9,100	0/0:48,0:13:32.42:0,32,484	0/0:49,0:22:26.14:0,26,676	1/1:0,17:17:2.83:43,3,0	1/1:13,1:16:34.17:419,34,0	1/1:22,0:24:21.68:541,22,0	0/1:17,0:30:7.60:8,0,222	1/1:0,13:13:6.49:101,6,0	1/1:0,12:12:30.02:437,30,0	0/1:0,8:8:0:0,0,0	1/1:18,0:18:46.84:559,47,0	0/0:12,0:12:36.12:0,36,858	1/1:11,3:17:19.03:473,19,0	1/1:22,3:31:52.46:709,52,0	1/1:19,0:22:52.25:628,52,0	1/1:0,0:24:9:140,9,0	1/1:19,1:20:25.67:648,26,0	1/1:2,12:12:36.06:478,36,0	1/1:8,1:9:3:25,3,0	1/1:26,0:28:56.35:773,56,0	0/0:37,0:36:99:0,105,2414	0/0:21,0:21:62.02:0,62,1409	0/0:38,0:37:99:0,102,2450	1/1:11,2:14:33.01:442,33,0	1/1:0,25:27:60.04:805,60,0	1/1:12,1:12:27:393,27,0	1/1:5,0:11:15.30:165,15,0
chr10	63834811	.	C	CTGTG	891.31	PASS	AB=0.971;AC=22;AF=0.393;AN=56;BaseQRankSum=3.876;DP=629;FS=0.596;HRun=0;HaplotypeScore=161.8593;InbreedingCoeff=0.0195;MQ=57.58;MQ0=16;MQRankSum=-0.017;QD=2.46;ReadPosRankSum=-2.968;VQSLOD=1.9926;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:14,27:42:3.95:317,0,4	1/1:2,7:10:5.47:144,5,0	0/0:44,0:10:15.01:0,15,280	0/0:49,0:22:35.08:0,35,534	0/0:17,0:17:2.83:0,3,28	0/1:17,0:16:8.05:8,0,53	0/1:23,0:23:12.76:87,0,13	0/1:35,0:31:5.01:5,0,189	0/1:13,0:13:10.48:10,0,22	0/0:12,0:12:5.55:0,6,18	0/1:8,0:8:0:1,0,0	0/1:18,0:18:5.82:54,0,6	0/0:12,0:12:36.12:0,36,637	0/1:18,0:18:34.66:35,0,43	0/1:31,0:31:44.56:45,0,91	0/1:21,0:21:13.75:14,0,37	0/0:25,0:25:8.61:0,9,50	0/1:20,0:20:12.74:126,0,13	1/1:14,0:12:10.23:49,10,0	0/1:9,0:9:0:0,0,0	0/1:30,0:28:13.86:14,0,29	0/0:37,0:36:99:0,105,1817	0/0:22,0:22:63.18:0,63,1063	0/0:37,0:36:99:0,101,1687	1/1:14,0:14:3.16:12,3,0	0/1:27,0:27:9.10:84,0,9	1/1:13,0:12:3.68:44,4,0	0/0:11,0:11:14.59:0,15,122
chr10	63834835	.	GTGTA	G	2973.27	PASS	AB=1.000;AC=27;AF=0.500;AN=54;BaseQRankSum=7.918;DP=639;FS=14.863;HRun=0;HaplotypeScore=152.2693;InbreedingCoeff=0.3217;MQ=51.98;MQ0=17;MQRankSum=0.787;QD=8.06;ReadPosRankSum=-5.674;VQSLOD=-0.1847;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:37,0:37:5.33:5,0,312	0/0:10,0:10:17.92:0,18,243	0/0:33,0:8:11.15:0,11,182	0/0:45,0:15:24.09:0,24,227	1/1:16,2:18:20.42:176,20,0	1/1:20,0:19:5.20:184,5,0	0/1:25,0:25:33.05:183,0,33	0/0:46,0:42:85.50:0,85,1417	1/1:12,0:12:12.47:116,12,0	1/1:15,0:15:27.56:243,28,0	1/1:9,0:9:2.91:24,3,0	0/1:17,0:17:7.84:191,0,8	0/0:16,0:16:21.16:0,21,687	0/1:18,0:18:8.74:237,0,9	0/1:31,0:31:5.13:164,0,5	1/1:19,0:19:15.13:241,15,0	1/1:26,0:26:19.65:182,20,0	1/1:18,1:19:31.96:291,32,0	1/1:11,0:9:20.78:142,21,0	./.	0/1:36,0:34:27.98:234,0,28	0/0:33,0:32:90.09:0,90,1995	0/0:26,1:27:22.73:0,23,1382	0/0:36,0:35:93.90:0,94,1894	0/1:12,0:13:22.02:117,0,22	0/1:22,0:22:59.71:143,0,60	0/1:21,0:20:13.83:290,0,14	0/0:10,0:10:7.96:0,8,39
chr10	63834837	.	GTA	G	5030.05	PASS	AB=1.000;AC=38;AF=0.704;AN=54;BaseQRankSum=12.559;DP=630;FS=28.577;HRun=0;HaplotypeScore=129.6200;InbreedingCoeff=0.7841;MQ=53.13;MQ0=17;MQRankSum=1.336;QD=13.00;ReadPosRankSum=-2.107;VQSLOD=2.7900;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:34,0:35:30.70:31,0,199	0/1:10,0:10:0.94:1,0,136	0/0:32,0:10:14.12:0,14,166	0/0:44,0:15:20.06:0,20,206	1/1:17,1:18:20.29:165,20,0	1/1:19,0:18:20.51:298,21,0	1/1:24,0:24:20.15:269,20,0	0/0:45,0:41:86.28:0,86,1186	1/1:12,1:13:15.47:137,15,0	1/1:15,0:15:36.74:309,37,0	1/1:9,0:9:2.91:24,3,0	1/1:17,0:17:41.98:361,42,0	0/0:16,0:16:7.89:0,8,406	1/1:19,0:19:26.82:318,27,0	1/1:31,0:31:56.78:546,57,0	1/1:19,0:19:44.86:391,45,0	1/1:26,0:26:24.83:214,25,0	1/1:18,0:19:28.41:302,28,0	1/1:11,0:9:25.81:179,26,0	./.	1/1:36,0:34:56.02:488,56,0	0/0:33,0:32:43.11:0,43,1387	0/0:26,0:26:56.33:0,56,1033	0/0:33,1:33:44.62:0,45,1348	1/1:12,0:12:2.49:154,2,0	1/1:23,0:23:34.54:298,35,0	1/1:20,1:20:45.44:346,45,0	1/1:10,0:10:18.33:196,18,0
chr10	63836657	.	GATAGACTGT	G	5415.85	PASS	AC=26;AF=0.765;AN=34;BaseQRankSum=6.657;DP=263;FS=0.000;HRun=0;HaplotypeScore=58.3561;InbreedingCoeff=0.6456;MQ=22.17;MQ0=127;MQRankSum=0.319;QD=49.23;ReadPosRankSum=0.848;VQSLOD=4.2305;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/0:14,0:12:30.03:0,30,1366	./.	./.	1/1:3,11:11:12.04:360,12,0	1/1:2,2:3:6.02:180,6,0	./.	./.	./.	1/1:3,11:12:33.11:964,33,0	1/1:1,15:15:24.08:721,24,0	1/1:1,2:2:6.02:180,6,0	0/0:12,0:3:3.01:0,3,144	./.	1/1:4,0:2:2.94:18,3,0	1/1:3,1:1:3.01:90,3,0	./.	1/1:1,1:1:3.01:90,3,0	./.	1/1:2,18:19:45.11:1281,45,0	./.	0/0:21,0:13:15.05:0,15,647	0/0:17,0:12:12.51:0,13,505	./.	1/1:2,13:12:27.09:811,27,0	1/1:2,1:2:3.01:90,3,0	1/1:1,2:2:6.02:180,6,0	1/1:0,7:5:15.05:450,15,0
chr10	63838892	.	C	CTGTGTG	2473.98	PASS	AB=0.860;AC=34;AF=0.654;AN=52;BaseQRankSum=-1.703;DP=740;FS=2.835;HRun=0;HaplotypeScore=159.1283;InbreedingCoeff=0.3603;MQ=54.43;MQ0=19;MQRankSum=-3.326;QD=4.71;ReadPosRankSum=-1.630;VQSLOD=2.2162;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:35,0:35:33.90:103,0,34	1/1:9,0:9:6.67:71,7,0	./.	./.	0/0:14,0:16:3.01:0,3,42	1/1:26,0:25:15.03:276,15,0	1/1:30,0:29:3:90,3,0	0/1:31,0:28:0.10:0,0,0	1/1:16,4:22:3.01:80,3,0	1/1:32,0:30:21.24:261,21,0	0/0:14,3:17:3.07:0,3,11	1/1:32,0:32:9.03:172,9,0	0/0:26,0:26:20.35:0,20,345	0/1:24,0:31:0.13:0,0,0	1/1:23,0:23:7.98:109,8,0	0/1:17,8:27:44.94:89,0,45	0/1:24,0:32:28.09:195,0,28	1/1:12,7:23:3.90:98,4,0	1/1:17,0:14:8.99:128,9,0	1/1:11,0:10:8.95:180,9,0	1/1:67,0:65:6.56:100,7,0	0/0:22,0:23:11.84:0,12,186	0/0:20,0:22:11.86:0,12,138	0/0:36,0:39:36.05:0,36,547	1/1:18,0:19:15.58:256,16,0	0/1:24,0:28:10.08:272,0,10	1/1:10,0:10:2.06:21,2,0	1/1:10,0:14:6.49:135,6,0
chr10	63839477	.	A	ATTT	6812.68	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=11.207;DP=710;FS=0.770;HRun=13;HaplotypeScore=140.2783;InbreedingCoeff=0.9520;MQ=71.24;MQ0=0;MQRankSum=-0.533;QD=13.71;ReadPosRankSum=-0.392;VQSLOD=2.7892;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:46:74.03:0,74,978	0/0:9,0:9:24.06:0,24,258	0/0:14,0:13:8.54:0,9,82	0/0:12,0:12:4.52:0,5,87	1/1:7,2:33:57.72:477,58,0	1/1:4,0:24:33.53:244,34,0	1/1:7,0:22:22.91:217,23,0	0/0:24,0:24:28.45:0,28,511	1/1:9,0:22:6.86:273,7,0	1/1:5,0:30:73.03:610,73,0	1/1:5,0:20:37.90:294,38,0	1/1:6,0:34:52.06:422,52,0	0/0:27,0:31:64.76:0,65,668	1/1:2,0:17:24.76:172,25,0	1/1:8,1:34:42.74:320,43,0	1/1:3,1:34:64.03:513,64,0	1/1:3,1:30:67.02:536,67,0	1/1:2,1:20:27.66:221,28,0	1/1:9,0:21:29.41:221,29,0	1/1:12,1:43:81:684,81,0	1/1:6,0:18:21.86:161,22,0	0/0:20,0:25:34.19:0,34,514	0/0:20,0:23:37.21:0,37,402	0/0:29,0:29:54.06:0,54,775	1/1:2,1:19:27.42:311,27,0	1/1:8,0:34:63.33:465,63,0	1/1:3,3:23:43.98:451,44,0	1/1:4,1:18:26.42:219,26,0
chr10	63840394	.	CCCATCCATCCATCCATTCAT	C	19945.13	PASS	AB=0.667;AC=37;AF=0.661;AN=56;BaseQRankSum=14.571;DP=688;FS=0.000;HRun=0;HaplotypeScore=307.0041;InbreedingCoeff=0.9240;MQ=58.86;MQ0=8;MQRankSum=-11.476;QD=45.23;ReadPosRankSum=4.604;VQSLOD=2.6030;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:93.32:0,93,7618	0/0:14,0:14:33.58:0,34,2732	0/0:46,0:36:54.06:0,54,2371	0/0:40,0:31:62.80:0,63,3804	1/1:6,15:21:8.86:69,9,0	1/1:6,15:20:18.06:958,18,0	1/1:10,22:32:9.03:477,9,0	0/0:31,0:31:60.20:0,60,4114	1/1:9,21:30:42.14:2198,42,0	1/1:8,22:29:50.91:1675,51,0	1/1:9,13:22:5.93:177,6,0	1/1:12,16:28:27.09:1342,27,0	0/0:14,0:14:39.13:0,39,3436	1/1:6,14:20:24.08:1284,24,0	1/1:4,22:26:33.11:1760,33,0	1/1:2,23:25:33.11:1775,33,0	1/1:8,26:34:30.10:1490,30,0	1/1:8,14:22:15.05:813,15,0	1/1:8,7:14:20.99:761,21,0	1/1:9,6:15:12.04:435,12,0	0/1:18,18:36:0.06:0,0,1	0/0:20,0:20:54.19:0,54,4517	0/0:14,0:14:39.13:0,39,2984	0/0:26,0:26:66.83:0,67,5705	1/1:2,16:18:21.07:1139,21,0	1/1:4,17:20:42.03:1552,42,0	1/1:6,15:21:26.67:1394,27,0	1/1:0,4:4:12.04:646,12,0
chr10	63842180	.	CGT	C	115.44	PASS	AB=0.926;AC=9;AF=0.167;AN=54;BaseQRankSum=1.098;DP=642;FS=0.000;HRun=0;HaplotypeScore=116.3165;InbreedingCoeff=-0.0066;MQ=66.78;MQ0=4;MQRankSum=2.373;QD=0.45;ReadPosRankSum=0.608;VQSLOD=1.8303;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:34:0:0,0,0	./.	1/1:34,0:18:2.80:13,3,0	0/0:31,0:18:3.01:0,3,40	0/0:17,0:17:2.98:0,3,22	0/0:16,0:16:4.66:0,5,31	0/0:35,0:33:8.53:0,9,73	0/1:26,4:30:33.40:33,0,237	0/1:29,1:29:16.23:16,0,39	0/0:27,0:27:50.54:0,51,392	0/0:13,0:12:3.01:0,3,30	0/0:16,0:15:5.95:0,6,48	0/1:15,1:16:4.11:4,0,277	0/0:24,0:24:3:0,3,26	0/0:20,0:20:8.72:0,9,58	0/0:21,0:21:2.97:0,3,20	0/0:27,0:27:3:0,3,27	0/0:17,0:16:22.99:0,23,175	0/0:22,0:22:14.55:0,15,85	0/0:12,0:12:5.90:0,6,48	0/1:53,0:61:0:0,0,0	0/1:10,1:11:18.61:19,0,160	0/0:9,0:9:8.04:0,8,150	0/1:29,12:41:99:142,0,564	0/0:17,0:16:2.92:0,3,25	0/0:32,0:31:24.95:0,25,163	0/0:14,0:13:8.97:0,9,72	0/0:7,0:7:5.97:0,6,46
chr10	63842211	.	G	GTGTGTGTGTGTGTGTGTA	10312.77	PASS	AB=1.000;AC=40;AF=0.714;AN=56;BaseQRankSum=6.066;DP=636;FS=5.502;HRun=0;HaplotypeScore=243.9536;InbreedingCoeff=0.7452;MQ=52.43;MQ0=11;MQRankSum=-4.501;QD=21.94;ReadPosRankSum=-0.371;VQSLOD=3.0433;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:11.63:0,12,89	0/0:9,0:9:14.96:0,15,118	0/0:20,0:8:23.39:0,23,223	0/0:29,0:17:41.08:0,41,366	1/1:9,0:9:8.78:60,9,0	1/1:20,0:20:27.39:450,27,0	1/1:35,0:33:43.97:498,44,0	0/1:30,0:30:14.40:14,0,969	1/1:31,0:30:38.51:558,39,0	1/1:25,0:25:72.66:1778,73,0	1/1:10,0:9:9:96,9,0	1/1:7,0:33:2.82:202,3,0	0/0:24,0:24:64.20:0,64,998	1/1:14,0:26:11.78:400,12,0	1/1:23,0:22:30.01:578,30,0	1/1:27,0:27:39.44:544,39,0	1/1:6,14:30:15.05:909,15,0	1/1:18,0:17:43.81:1165,44,0	1/1:19,0:16:43.45:502,43,0	1/1:16,0:16:14.65:158,15,0	1/1:46,0:46:29.78:241,30,0	0/1:9,0:9:24.40:24,0,426	0/0:10,0:10:20.68:0,21,514	0/0:42,0:42:96.09:0,96,2472	1/1:13,0:12:14.98:150,15,0	1/1:19,0:18:40.04:870,40,0	1/1:15,1:16:32.88:711,33,0	1/1:1,9:13:6.02:403,6,0
chr10	63843291	.	T	TGAGAGAGAGA	7765.16	PASS	AB=0.896;AC=36;AF=0.643;AN=56;BaseQRankSum=9.615;DP=439;FS=0.000;HRun=0;HaplotypeScore=217.8792;InbreedingCoeff=0.6608;MQ=59.08;MQ0=17;MQRankSum=-8.839;QD=31.31;ReadPosRankSum=2.298;VQSLOD=4.1753;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:33:63.09:0,63,1801	0/0:6,0:6:15.05:0,15,473	0/0:33,0:24:54.14:0,54,1578	0/0:30,0:18:33.62:0,34,897	1/1:17,0:16:5.35:84,5,0	1/1:9,0:10:3.01:93,3,0	1/1:11,0:11:6.02:182,6,0	0/0:23,0:21:42.09:0,42,1126	1/1:11,0:10:12.04:358,12,0	1/1:14,0:13:30.09:857,30,0	1/1:16,0:14:3.01:50,3,0	1/1:13,1:15:15.05:447,15,0	0/0:16,0:15:39.06:0,39,1031	1/1:7,0:10:9.50:243,10,0	1/1:14,0:15:12.04:323,12,0	1/1:10,6:16:8.70:329,9,0	0/1:14,1:18:99:1105,0,123	0/1:11,0:11:36.19:457,0,36	1/1:9,0:11:30.07:725,30,0	1/1:12,0:11:6.01:119,6,0	1/1:10,0:9:2.96:24,3,0	0/0:16,0:16:33.11:0,33,956	0/0:13,0:13:30.57:0,31,940	0/0:19,0:19:42.14:0,42,1268	1/1:14,0:12:5.96:182,6,0	1/1:9,3:11:33.11:1064,33,0	1/1:12,1:16:33.53:996,34,0	1/1:3,0:3:3.01:129,3,0
chr10	63843297	.	AGTGTGTGTGTGTGTGTGTGTGTGTGT	A	52.35	PASS	AC=2;AF=0.043;AN=46;BaseQRankSum=2.668;DP=430;FS=9.168;HRun=0;HaplotypeScore=223.2774;InbreedingCoeff=0.3994;MQ=55.73;MQ0=29;MQRankSum=2.026;QD=4.03;ReadPosRankSum=-2.686;VQSLOD=1.1804;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:34:48.16:0,48,3871	0/0:6,0:6:12.04:0,12,1105	0/0:30,0:21:6.02:0,6,201	0/0:30,0:18:9.03:0,9,249	0/0:19,0:18:5.49:0,5,528	./.	./.	0/0:23,0:20:11.53:0,12,420	0/0:11,0:10:0:0,0,0	1/1:11,2:12:6.02:130,6,0	./.	0/0:12,0:11:0.47:0,0,1	0/0:17,0:16:33.11:0,33,2739	0/0:10,0:8:1.82:0,2,5	0/0:12,0:11:1.25:0,1,3	0/0:14,0:14:4.37:0,4,99	0/0:18,0:17:13.90:0,14,229	0/0:9,0:8:1.55:0,2,4	0/0:9,0:7:3.01:0,3,73	./.	./.	0/0:16,0:15:27.08:0,27,2173	0/0:13,0:15:20.50:0,21,1600	0/0:29,0:27:51.18:0,51,4700	0/0:13,0:11:0.47:0,0,1	0/0:11,0:10:6.02:0,6,143	0/0:12,0:12:3.48:0,3,85	0/0:5,0:4:3.01:0,3,90
chr10	63845750	.	CGAATCCCTGCCTTCCTG	C	11278.36	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=10.163;DP=608;FS=5.891;HRun=0;HaplotypeScore=252.9531;InbreedingCoeff=0.8175;MQ=85.76;MQ0=0;MQRankSum=-10.386;QD=29.22;ReadPosRankSum=3.130;VQSLOD=3.2914;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:69.24:0,69,4905	0/0:12,0:12:21.07:0,21,1603	0/0:48,0:48:20.55:0,21,461	0/0:22,0:22:36.11:0,36,970	1/1:10,12:21:4.72:24,5,0	1/1:7,6:13:6.02:277,6,0	1/1:12,6:18:3.01:138,3,0	0/0:18,0:18:27.09:0,27,1169	1/1:10,20:30:36.12:1661,36,0	1/1:10,7:17:20.75:576,21,0	1/1:5,6:11:12.04:497,12,0	1/1:8,14:22:24.08:1107,24,0	0/0:25,0:25:57.15:0,57,3443	1/1:13,11:24:21.07:969,21,0	1/1:17,21:38:30.10:1328,30,0	1/1:11,17:28:27.09:1246,27,0	1/1:8,14:22:15.05:692,15,0	1/1:9,11:20:4.26:274,4,0	1/1:15,4:19:9.75:297,10,0	1/1:11,10:21:15.05:576,15,0	1/1:14,9:23:1.71:11,2,0	0/0:13,0:13:36.11:0,36,2556	0/0:15,0:15:33.11:0,33,2568	0/0:27,0:27:42.11:0,42,2504	1/1:7,6:13:9.03:415,9,0	1/1:11,9:20:21.07:774,21,0	1/1:11,8:19:2.68:138,3,0	1/1:1,5:6:6.02:277,6,0
chr10	63847089	.	A	AT	2676.08	PASS	AB=0.805;AC=34;AF=0.630;AN=54;BaseQRankSum=-6.560;DP=280;FS=0.000;HRun=9;HaplotypeScore=27.9076;InbreedingCoeff=0.5099;MQ=73.83;MQ0=4;MQRankSum=0.968;QD=12.99;ReadPosRankSum=4.568;VQSLOD=1.8604;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:41.93:0,42,354	0/0:4,0:4:9:0,9,78	0/1:28,0:9:9.78:10,0,58	0/1:38,0:16:0.06:0,0,54	1/1:3,11:14:33.09:363,33,0	0/1:1,8:9:1.99:208,0,2	0/0:1,0:1:3:0,3,26	0/0:42,0:41:92.87:0,93,791	1/1:0,2:2:3.01:33,3,0	1/1:1,1:2:3.01:33,3,0	1/1:2,4:6:3.01:33,3,0	1/1:2,0:2:3.01:33,3,0	0/0:4,0:4:8.98:0,9,74	1/1:2,2:4:3.01:33,3,0	1/1:0,10:10:24.06:265,24,0	1/1:1,4:5:12.03:133,12,0	1/1:1,15:14:24.06:265,24,0	1/1:2,18:20:42.11:465,42,0	1/1:5,11:16:33.01:341,33,0	1/1:0,3:3:9.02:100,9,0	0/0:2,0:2:2.97:0,3,20	./.	0/0:3,0:3:5.99:0,6,50	0/0:4,0:4:9:0,9,78	1/1:3,2:6:6.02:66,6,0	1/1:2,4:6:12.02:124,12,0	0/1:5,4:9:14.01:88,0,14	1/1:1,8:9:24.06:258,24,0
chr10	63849913	.	T	TGTCCAC	36679.76	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-11.488;DP=803;FS=1.259;HRun=0;HaplotypeScore=149.2867;InbreedingCoeff=0.9945;MQ=80.64;MQ0=0;MQRankSum=-20.564;QD=70.67;ReadPosRankSum=2.528;VQSLOD=5.1745;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:56:99:0,162,3725	0/0:7,0:7:21.06:0,21,449	0/0:36,0:36:99:0,105,2117	0/0:29,0:29:68.69:0,69,1667	1/1:3,18:23:36.08:1073,36,0	1/1:2,17:20:39.13:1383,39,0	1/1:12,32:46:96.28:3125,96,0	0/0:31,0:31:81.28:0,81,1869	1/1:8,21:30:60.16:1984,60,0	1/1:5,22:27:75.21:2500,75,0	1/1:6,13:19:33.11:1170,33,0	1/1:9,24:38:87.09:2585,87,0	0/0:39,0:39:99:0,114,2651	1/1:10,20:30:63.13:1930,63,0	1/1:4,31:38:87.26:2958,87,0	1/1:4,27:34:63.17:2129,63,0	1/1:7,25:33:54.19:1905,54,0	1/1:4,21:25:63.22:2207,63,0	1/1:9,14:24:63.22:2132,63,0	1/1:4,16:21:51.13:1686,51,0	1/1:10,23:35:57.20:1947,57,0	0/0:32,0:32:93.30:0,93,2082	0/0:16,0:16:45.15:0,45,1061	0/0:38,0:36:99:0,111,2480	1/1:2,17:21:39.61:1384,40,0	1/1:3,21:25:75.26:2576,75,0	1/1:2,18:22:45.07:1580,45,0	1/1:2,6:8:12.04:427,12,0
chr10	63850862	.	GGTGTGTGT	G	1476.78	PASS	AB=0.905;AC=18;AF=0.321;AN=56;BaseQRankSum=1.996;DP=693;FS=20.128;HRun=0;HaplotypeScore=172.5344;InbreedingCoeff=-0.3263;MQ=60.12;MQ0=13;MQRankSum=-1.380;QD=3.12;ReadPosRankSum=3.653;VQSLOD=1.2444;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:24:27.09:0,27,893	0/0:6,0:6:3.01:0,3,78	0/0:25,0:17:2.08:0,2,36	0/0:28,0:23:15.05:0,15,229	0/0:19,0:20:24.08:0,24,703	0/1:18,9:27:99:121,0,293	0/1:18,5:25:99:334,0,179	1/1:24,0:21:0.86:2,1,0	0/1:17,2:27:99:219,0,409	0/1:32,0:32:15.18:15,0,617	1/1:14,0:15:2.99:24,3,0	0/1:35,1:40:99:114,0,709	0/0:17,0:21:39.13:0,39,1144	0/1:13,0:19:57.35:57,0,464	0/1:19,9:31:99:136,0,299	0/1:19,1:28:84.32:84,0,283	0/1:35,0:42:89.80:90,0,573	0/1:15,9:26:99:176,0,534	0/0:25,0:23:13.07:0,13,294	0/1:20,0:21:6.86:7,0,155	0/1:59,1:60:99:129,0,535	0/0:11,0:11:3.01:0,3,107	0/0:8,0:8:3.01:0,3,37	0/0:31,0:33:69.23:0,69,1941	0/1:16,0:18:50.90:51,0,262	0/1:31,0:33:65.84:66,0,741	0/0:5,0:7:6.02:0,6,209	0/0:9,0:8:2.39:0,2,105
chr10	63851599	.	A	AGC	12242.16	PASS	AC=36;AF=0.692;AN=52;BaseQRankSum=12.056;DP=462;FS=2.012;HRun=0;HaplotypeScore=89.0013;InbreedingCoeff=0.9616;MQ=47.55;MQ0=49;MQRankSum=-3.906;QD=42.66;ReadPosRankSum=0.727;VQSLOD=6.4942;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:22:57.19:0,57,839	0/0:6,0:6:15.05:0,15,221	./.	0/0:20,0:2:2.60:0,3,10	1/1:2,9:10:18.06:331,18,0	1/1:2,19:20:48.16:896,48,0	1/1:3,21:23:54.18:972,54,0	0/0:24,0:23:63.17:0,63,900	1/1:2,11:12:33.11:616,33,0	1/1:0,17:17:48.16:896,48,0	1/1:1,18:18:45.15:836,45,0	1/1:4,19:23:42:785,42,0	0/0:17,0:17:48.13:0,48,684	1/1:1,13:14:36.12:672,36,0	1/1:2,15:16:36.12:672,36,0	1/1:1,15:16:36.12:673,36,0	1/1:1,15:16:42.14:786,42,0	1/1:1,19:20:48.16:892,48,0	1/1:3,10:11:30.10:554,30,0	1/1:4,7:11:18.06:336,18,0	1/1:0,10:10:17.41:335,17,0	0/0:11,0:11:30.10:0,30,441	0/0:17,0:17:42.13:0,42,599	0/0:24,0:24:56.82:0,57,839	1/1:1,15:16:45.15:840,45,0	1/1:2,12:14:39.13:711,39,0	1/1:0,9:9:24.08:440,24,0	./.
chr10	63851629	.	GA	G	62.71	PASS	AB=0.878;AC=21;AF=0.375;AN=56;BaseQRankSum=3.199;DP=464;FS=3.998;HRun=19;HaplotypeScore=107.6252;InbreedingCoeff=0.0219;MQ=53.11;MQ0=18;MQRankSum=1.731;QD=0.25;ReadPosRankSum=6.210;VQSLOD=-0.6030;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,4:26:3.79:0,4,145	1/1:6,3:9:2.62:16,3,0	0/0:17,0:5:2.66:0,3,31	0/0:16,0:6:7.89:0,8,46	0/0:15,1:16:17.85:0,18,95	0/1:18,2:23:20.10:20,0,22	1/1:11,0:16:4.99:16,5,0	0/0:20,1:28:31.87:0,32,221	0/0:9,0:9:2.92:0,3,18	1/1:13,0:15:3.38:11,3,0	0/0:12,0:13:0.47:0,0,1	0/1:17,2:20:12.39:12,0,13	0/0:16,0:16:13.07:0,13,81	0/1:15,0:15:2.46:2,0,48	1/1:15,2:17:2.13:13,2,0	0/1:15,3:18:7.92:8,0,16	0/1:14,0:14:2.47:2,0,46	0/1:14,0:13:8.34:8,0,14	0/1:15,2:15:1.48:20,0,1	1/1:8,2:10:4.49:27,4,0	0/0:5,0:5:0:0,0,0	0/1:13,5:18:8.67:9,0,58	0/1:13,1:19:7.50:8,0,26	0/0:27,3:30:6.43:0,6,108	0/1:16,2:18:14.59:15,0,33	0/0:14,0:13:0.89:0,1,2	0/0:12,2:14:2.19:0,2,30	0/1:3,1:6:8.89:15,0,9
chr10	63851792	.	C	CA	14765.42	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-7.578;DP=693;FS=13.819;HRun=5;HaplotypeScore=68.9768;InbreedingCoeff=0.9999;MQ=78.50;MQ0=0;MQRankSum=-1.490;QD=32.81;ReadPosRankSum=3.542;VQSLOD=4.2232;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,105,1118	0/0:12,0:12:33.08:0,33,354	0/0:22,0:22:50.99:0,51,527	0/0:18,0:18:46.67:0,47,486	0/0:24,0:24:72.18:0,72,773	1/1:3,26:28:69.22:908,69,0	1/1:2,22:24:63.20:829,63,0	0/0:44,0:44:99:0,123,1295	1/1:1,14:15:42.14:553,42,0	1/1:2,24:26:72.22:931,72,0	1/1:3,18:21:42.14:552,42,0	1/1:3,27:30:69.22:908,69,0	0/0:18,0:18:48.12:0,48,516	1/1:2,19:21:42.13:546,42,0	1/1:0,36:36:99:1302,99,0	1/1:2,24:26:54.17:710,54,0	1/1:4,21:25:63.17:798,63,0	1/1:3,23:25:63.20:829,63,0	1/1:0,19:19:57.19:750,57,0	1/1:1,26:27:72.19:927,72,0	1/1:2,28:30:72.23:947,72,0	0/0:22,0:22:54.12:0,54,573	0/0:15,0:15:36.07:0,36,378	0/0:30,0:30:90.20:0,90,956	1/1:2,26:28:78.25:1026,78,0	1/1:5,21:26:63.20:829,63,0	1/1:3,27:29:75.24:986,75,0	1/1:0,11:11:33.11:434,33,0
chr10	63855747	.	CGTGT	C	2452.37	PASS	AB=0.998;AC=34;AF=0.607;AN=56;BaseQRankSum=2.585;DP=657;FS=0.000;HRun=0;HaplotypeScore=127.5255;InbreedingCoeff=0.0135;MQ=76.94;MQ0=20;MQRankSum=-1.951;QD=4.98;ReadPosRankSum=2.017;VQSLOD=2.1062;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:41:14.79:0,15,252	0/0:7,0:11:9.12:0,9,70	0/1:43,0:24:0:0,0,0	0/0:49,0:39:2.60:0,3,10	0/1:22,0:22:12.77:49,0,13	0/1:22,0:21:16.80:17,0,70	0/1:27,0:27:20.20:20,0,58	1/1:38,0:37:11.75:173,12,0	1/1:12,0:11:5.83:66,6,0	0/1:24,0:24:71.38:71,0,86	1/1:6,0:6:8.99:78,9,0	0/1:21,0:21:65.48:65,0,66	1/1:10,9:19:15.49:212,15,0	0/1:21,0:20:49.31:49,0,58	1/1:21,0:20:17.51:198,18,0	1/1:21,0:21:2.84:31,3,0	0/1:19,0:18:6.59:103,0,7	0/1:32,0:31:24.91:131,0,25	0/1:22,0:22:8.83:29,0,9	1/1:10,0:10:3.01:39,3,0	0/0:43,0:42:5.99:0,6,49	1/1:7,6:13:14.94:207,15,0	1/1:14,6:20:15.26:361,15,0	1/1:8,23:31:39.13:620,39,0	0/0:20,0:19:2.96:0,3,19	0/1:21,0:21:1.74:17,0,2	0/1:18,0:18:12.75:55,0,13	1/1:7,0:7:1.23:21,1,0
chr10	63855776	.	GTGTGTGTT	G	1269.66	PASS	AB=0.995;AC=18;AF=0.321;AN=56;BaseQRankSum=-4.248;DP=628;FS=6.691;HRun=0;HaplotypeScore=132.0320;InbreedingCoeff=0.2262;MQ=57.57;MQ0=21;MQRankSum=-0.920;QD=5.54;ReadPosRankSum=-4.173;VQSLOD=0.3570;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:47:24.47:0,24,811	0/0:10,0:10:28.66:0,29,345	0/0:40,0:11:5.59:0,6,164	0/0:46,0:15:10.36:0,10,172	1/1:3,16:19:8.24:171,8,0	1/1:24,0:23:1.94:98,2,0	0/0:33,0:33:5.79:0,6,34	0/0:33,0:31:56.44:0,56,776	0/0:14,0:13:5.68:0,6,29	0/1:25,0:25:2.86:207,0,3	1/1:12,0:12:12.47:184,12,0	0/1:22,0:22:50.34:50,0,102	0/0:14,0:14:1.46:0,1,141	0/0:18,0:18:5.68:0,6,28	0/0:24,1:24:2.07:0,2,67	0/1:11,0:11:2.35:63,0,2	0/1:21,1:20:66.50:178,0,66	0/1:33,0:32:7.09:7,0,58	1/1:13,0:13:18.09:183,18,0	0/1:12,0:12:1.35:1,0,10	0/0:37,0:36:3.01:0,3,51	0/0:16,0:16:35.94:0,36,323	0/0:14,0:14:26.97:0,27,291	0/0:34,0:33:63.52:0,64,620	0/0:17,0:16:3.48:0,3,44	0/1:14,0:14:72.03:108,0,72	0/1:16,0:16:12.39:118,0,12	1/1:6,0:6:3.58:63,4,0
chr10	63855778	.	GTGTGTT	G	2619.31	PASS	AB=1.000;AC=36;AF=0.643;AN=56;BaseQRankSum=-0.542;DP=618;FS=2.126;HRun=0;HaplotypeScore=113.9311;InbreedingCoeff=0.6610;MQ=57.86;MQ0=19;MQRankSum=-2.120;QD=7.61;ReadPosRankSum=-0.059;VQSLOD=2.0712;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:47:24.39:0,24,663	0/0:10,0:10:28.66:0,29,320	0/0:39,0:11:5.58:0,6,164	0/0:43,0:15:9.58:0,10,171	1/1:17,1:18:8.25:151,8,0	1/1:24,0:23:27.31:184,27,0	1/1:32,1:33:5.41:31,5,0	0/0:34,0:32:11.94:0,12,587	1/1:14,0:13:5.75:39,6,0	1/1:25,1:26:53.02:377,53,0	1/1:10,2:12:29.31:300,29,0	1/1:20,1:21:18.67:167,19,0	0/0:15,0:15:2.46:0,2,74	1/1:18,0:18:5.49:24,5,0	1/1:24,0:23:19.14:89,19,0	1/1:11,1:12:20.72:161,21,0	1/1:22,0:20:33.42:247,33,0	1/1:31,1:31:17.87:144,18,0	1/1:13,0:13:33.21:213,33,0	1/1:10,1:11:5.75:61,6,0	0/0:35,1:35:3:0,3,25	0/0:15,0:15:34.07:0,34,230	0/1:13,0:13:41.91:42,0,81	0/0:34,0:33:54.90:0,55,315	0/1:15,0:14:13.03:18,0,13	1/1:14,0:14:5.79:147,6,0	1/1:15,1:16:30.38:285,30,0	1/1:5,1:6:8.99:135,9,0
chr10	63855780	.	GTGTT	G	4785.12	PASS	AB=1.000;AC=42;AF=0.750;AN=56;BaseQRankSum=3.487;DP=616;FS=3.591;HRun=0;HaplotypeScore=94.7928;InbreedingCoeff=0.4165;MQ=58.62;MQ0=19;MQRankSum=-0.568;QD=10.75;ReadPosRankSum=4.551;VQSLOD=3.2910;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:46:24.37:0,24,542	0/0:11,0:11:31.65:0,32,319	0/0:38,0:12:1.75:0,2,159	0/0:40,0:13:11.80:0,12,202	1/1:18,0:18:8.49:90,8,0	1/1:23,3:25:29.66:255,30,0	1/1:4,28:32:5.68:75,6,0	0/0:35,0:33:0.96:0,1,548	1/1:2,12:13:5.83:108,6,0	1/1:3,23:26:56.38:494,56,0	1/1:12,0:12:32.82:304,33,0	1/1:18,1:19:26.35:286,26,0	0/1:15,0:15:29.85:81,0,30	1/1:3,15:18:6.02:113,6,0	1/1:2,22:23:20.94:357,21,0	1/1:13,0:13:23.98:230,24,0	1/1:18,3:19:41.57:427,42,0	1/1:5,27:31:18.93:290,19,0	1/1:2,12:14:36.43:282,36,0	1/1:3,8:11:5.93:73,6,0	1/1:34,0:33:0.47:1,0,0	0/1:16,0:16:53.21:53,0,179	0/1:14,0:14:17.84:176,0,18	0/1:35,0:34:99:266,0,187	1/1:14,0:13:4.81:29,5,0	1/1:14,0:14:35.05:316,35,0	1/1:16,1:17:35.91:332,36,0	1/1:6,0:6:17.88:144,18,0
chr10	63855782	.	GTT	G	3204.74	PASS	AB=1.000;AC=39;AF=0.696;AN=56;BaseQRankSum=0.663;DP=613;FS=8.038;HRun=3;HaplotypeScore=88.9525;InbreedingCoeff=0.7245;MQ=61.61;MQ0=19;MQRankSum=-2.054;QD=8.64;ReadPosRankSum=1.408;VQSLOD=0.1124;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:46:27.36:0,27,471	0/0:12,0:12:34.58:0,35,297	0/0:38,0:14:7.74:0,8,222	0/0:43,0:17:24.29:0,24,270	1/1:17,0:17:8.05:50,8,0	1/1:27,0:26:32.16:246,32,0	1/1:32,0:32:5.64:43,6,0	0/0:34,0:32:3.33:0,3,568	1/1:13,1:13:5.97:45,6,0	1/1:24,0:24:57.63:440,58,0	1/1:13,0:13:35.59:261,36,0	1/1:18,0:18:25.01:214,25,0	0/0:16,0:16:4.44:0,4,104	1/1:16,0:16:5.99:49,6,0	1/1:24,0:23:20.83:163,21,0	1/1:12,0:12:23.96:198,24,0	1/1:22,0:20:44.77:347,45,0	1/1:29,1:29:18.84:147,19,0	1/1:13,0:13:36.07:250,36,0	1/1:10,0:10:3.88:26,4,0	1/1:2,32:33:3.01:45,3,0	0/0:17,0:17:38.72:0,39,283	0/1:15,0:15:36.66:37,0,127	0/0:35,0:34:45.29:0,45,342	1/1:1,12:12:6:70,6,0	1/1:14,0:14:41.82:340,42,0	1/1:17,0:17:38.81:299,39,0	1/1:6,0:6:17.85:130,18,0
chr10	63858625	.	T	TG	26309.31	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-15.764;DP=815;FS=1.789;HRun=0;HaplotypeScore=74.6576;InbreedingCoeff=0.9935;MQ=83.24;MQ0=0;MQRankSum=-5.454;QD=41.76;ReadPosRankSum=2.002;VQSLOD=5.6330;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,64:65:99:2635,166,0	1/1:0,12:12:27.09:431,27,0	0/0:27,0:26:72.06:0,72,946	0/0:28,0:28:65.15:0,65,886	1/1:0,31:31:93.23:1454,93,0	1/1:0,13:13:30.10:479,30,0	1/1:0,28:28:72.25:1150,72,0	1/1:3,25:28:78.13:1214,78,0	1/1:0,24:24:69.24:1102,69,0	1/1:0,34:34:99:1578,102,0	1/1:1,21:22:63.21:1006,63,0	1/1:1,42:43:99:1773,111,0	0/0:24,0:24:72.24:0,72,1005	1/1:2,41:43:96.33:1534,96,0	1/1:0,32:32:84.06:1342,84,0	1/1:2,25:27:69.23:1102,69,0	1/1:1,38:39:99:1582,99,0	1/1:1,22:23:60.20:958,60,0	1/1:1,17:18:54.13:784,54,0	1/1:1,27:28:78.26:1245,78,0	1/1:0,30:30:84.20:1310,84,0	0/0:29,0:29:84.28:0,84,1172	0/0:26,0:26:78.25:0,78,1074	0/0:51,0:51:99:0,147,2035	1/1:1,25:26:60.12:928,60,0	1/1:0,33:33:96.28:1454,96,0	1/1:0,26:25:66.23:1054,66,0	1/1:0,4:4:12.04:192,12,0
chr10	63860361	.	TC	T	12240.87	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=12.241;DP=613;FS=2.740;HRun=4;HaplotypeScore=79.1170;InbreedingCoeff=0.9969;MQ=91.86;MQ0=0;MQRankSum=-5.112;QD=30.76;ReadPosRankSum=4.697;VQSLOD=5.1821;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,144,1916	0/0:6,0:6:15.05:0,15,209	0/0:23,0:23:47.21:0,47,626	0/0:30,0:30:83.42:0,83,1071	1/1:1,19:20:45.14:539,45,0	1/1:0,21:21:54.17:646,54,0	1/1:0,29:29:66.20:788,66,0	0/0:31,0:31:78.24:0,78,1042	1/1:1,13:14:39.12:467,39,0	1/1:2,21:23:66.01:723,66,0	1/1:0,11:11:30.09:359,30,0	1/1:2,25:27:72.22:862,72,0	0/0:13,0:13:36.12:0,36,501	1/1:0,13:13:39.12:467,39,0	1/1:1,17:18:45.10:523,45,0	1/1:2,18:20:48.15:575,48,0	1/1:0,45:45:99:1473,123,0	1/1:2,33:35:84.22:990,84,0	1/1:0,14:14:42.13:502,42,0	1/1:1,11:12:33.10:395,33,0	1/1:1,35:36:93.29:1114,93,0	0/0:13,0:13:36.03:0,36,437	0/0:13,0:13:36.07:0,36,442	0/0:38,0:38:99:0,111,1545	1/1:1,20:21:54.16:643,54,0	1/1:2,15:17:45.13:529,45,0	1/1:1,13:14:30.09:359,30,0	1/1:0,8:8:24.07:287,24,0
chr10	63860543	.	C	CGTGTGT	145.42	PASS	AB=0.895;AC=6;AF=0.125;AN=48;BaseQRankSum=-2.130;DP=551;FS=3.287;HRun=0;HaplotypeScore=140.5747;InbreedingCoeff=0.3752;MQ=62.05;MQ0=13;MQRankSum=1.383;QD=1.45;ReadPosRankSum=0.504;VQSLOD=2.3747;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:43,0:42:12.42:147,12,0	0/1:11,4:14:0:0,0,0	./.	./.	0/0:21,0:21:3.01:0,3,42	0/0:14,0:14:3.01:0,3,40	0/0:27,0:26:2.71:0,3,37	./.	0/0:11,0:11:6.49:0,6,95	0/0:20,0:18:6.22:0,6,87	./.	0/0:18,0:18:8.99:0,9,98	0/0:8,0:9:5.50:0,6,83	0/0:12,0:12:2.22:0,2,7	0/0:12,0:12:3.01:0,3,36	0/0:14,0:14:11.98:0,12,129	0/0:26,0:24:2.63:0,3,41	0/0:30,0:30:7.68:0,8,178	0/1:24,0:25:0.28:1,0,0	0/0:11,0:11:2.84:0,3,14	0/0:20,0:19:2.51:0,3,7	0/0:16,0:15:12.02:0,12,179	0/0:9,0:8:12.01:0,12,136	0/0:46,0:49:48.12:0,48,829	1/1:17,0:17:9.01:100,9,0	0/0:22,0:22:12.16:0,12,153	0/0:16,0:16:3.01:0,3,42	0/0:6,0:6:5.69:0,6,64
chr10	63860569	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGCGC	T	142.31	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.053;DP=549;FS=2.321;HRun=0;HaplotypeScore=286.4196;InbreedingCoeff=0.5385;MQ=51.24;MQ0=31;MQRankSum=1.461;QD=6.47;ReadPosRankSum=-2.514;VQSLOD=2.1226;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:30:41.06:0,41,3582	0/0:15,0:14:18.06:0,18,965	0/0:16,0:4:9:0,9,201	0/0:16,0:3:9.01:0,9,187	1/1:7,15:21:2.91:219,3,0	0/0:16,0:16:18.06:0,18,1140	0/0:24,0:22:40.16:0,40,2574	0/0:17,0:16:42.14:0,42,1779	0/0:12,0:12:29.38:0,29,1982	0/0:23,0:21:35.80:0,36,3294	0/0:7,0:7:9.03:0,9,500	0/0:16,0:15:17.10:0,17,1023	0/0:10,0:7:16.30:0,16,1382	0/0:23,0:21:14.08:0,14,665	0/0:11,0:11:6.02:0,6,308	0/0:16,0:16:42.13:0,42,2000	0/0:25,0:23:24.04:0,24,1376	0/0:30,0:30:48.16:0,48,2993	0/0:14,0:11:30:0,30,1533	0/0:16,0:16:18.06:0,18,1170	0/0:26,0:23:41.88:0,42,2331	0/0:21,0:20:42.14:0,42,3960	0/0:14,0:12:27.09:0,27,2127	0/0:63,0:62:99:0,162,14265	0/0:18,0:17:20.94:0,21,2085	0/0:23,0:22:45.34:0,45,3147	0/0:16,0:16:27.21:0,27,1788	0/0:7,0:6:15.04:0,15,892
chr10	63862502	.	TTGAGGGA	T	16676.59	PASS	AC=34;AF=0.630;AN=54;BaseQRankSum=13.272;DP=607;FS=2.216;HRun=0;HaplotypeScore=163.8932;InbreedingCoeff=0.9636;MQ=70.98;MQ0=0;MQRankSum=-15.431;QD=40.77;ReadPosRankSum=2.430;VQSLOD=4.8260;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:87.30:0,87,3162	0/0:5,0:5:15.02:0,15,484	0/0:23,0:23:37.06:0,37,1212	0/0:7,0:7:5.91:0,6,126	0/0:14,0:14:36.12:0,36,1373	1/1:2,15:17:42.14:1015,42,0	1/1:11,16:27:36.12:879,36,0	0/0:30,0:30:63.21:0,63,2242	1/1:5,24:29:57.67:1387,58,0	1/1:7,17:24:51.14:1157,51,0	1/1:2,2:4:6.02:148,6,0	1/1:2,19:21:38.81:960,39,0	0/0:30,0:30:84.29:0,84,3167	1/1:3,22:25:57.20:1394,57,0	1/1:8,23:31:44.98:1098,45,0	1/1:3,27:30:63.22:1551,63,0	1/1:12,28:40:54.19:1329,54,0	1/1:3,18:21:26.66:665,27,0	1/1:11,12:23:51.18:1230,51,0	1/1:2,11:13:24.08:541,24,0	1/1:10,29:39:24.08:456,24,0	0/0:13,0:13:32.69:0,33,1183	0/0:10,0:10:24.08:0,24,811	0/0:30,0:30:75.20:0,75,2575	1/1:3,11:14:21.07:497,21,0	1/1:3,20:23:54.17:1282,54,0	1/1:3,25:28:45.15:1087,45,0	./.
chr10	63862869	.	AGGGTGGT	A	1357.08	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.846;DP=573;FS=4.374;HRun=0;HaplotypeScore=131.2787;InbreedingCoeff=0.9804;MQ=84.61;MQ0=0;MQRankSum=-6.740;QD=45.24;ReadPosRankSum=0.781;VQSLOD=3.1839;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,20:23:42.14:1105,42,0	1/1:2,5:7:15.05:370,15,0	0/0:12,0:12:36.11:0,36,1073	0/0:26,0:26:55.12:0,55,2512	0/0:17,0:17:45.15:0,45,1716	0/0:20,0:20:60.21:0,60,2357	0/0:35,0:35:99:0,99,3858	0/0:18,0:18:54.18:0,54,1971	0/0:17,0:17:51.17:0,51,1915	0/0:24,0:24:72.22:0,72,2577	0/0:12,0:12:29.71:0,30,1124	0/0:24,0:24:72.25:0,72,2907	0/0:20,0:20:60.21:0,60,2267	0/0:24,0:24:69.22:0,69,2561	0/0:25,0:25:75.26:0,75,2950	0/0:29,0:29:81.27:0,81,3171	0/0:33,0:33:96.33:0,96,3875	0/0:24,0:24:69.24:0,69,2661	0/0:19,0:19:51.18:0,51,1906	0/0:9,0:9:27.05:0,27,984	0/0:59,0:58:99:0,166,6611	0/0:13,0:13:30.10:0,30,1198	0/0:8,0:8:21.07:0,21,827	0/0:25,0:25:69.24:0,69,2728	0/0:14,0:14:39.13:0,39,1575	0/0:16,0:16:45.15:0,45,1619	0/0:15,0:15:45.15:0,45,1698	0/0:5,0:5:15.05:0,15,605
chr10	63863306	.	CTGTGTGTG	C	1536.77	PASS	AB=0.981;AC=25;AF=0.595;AN=42;BaseQRankSum=-2.936;DP=533;FS=0.000;HRun=0;HaplotypeScore=119.2514;InbreedingCoeff=0.2408;MQ=73.09;MQ0=29;MQRankSum=1.190;QD=5.07;ReadPosRankSum=2.272;VQSLOD=2.0336;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:31:14.37:14,0,64	0/1:7,0:7:19.81:20,0,46	./.	./.	0/0:17,0:16:11.63:0,12,284	./.	0/1:28,0:27:99:135,0,147	0/0:20,0:19:5.93:0,6,40	0/1:14,0:14:87.38:119,0,87	1/1:20,6:26:14.91:314,15,0	./.	1/1:19,0:18:9.02:173,9,0	0/0:12,0:10:6.49:0,6,214	1/1:11,0:10:9.03:212,9,0	1/1:11,0:10:8.99:167,9,0	1/1:11,5:16:3.01:74,3,0	1/1:25,10:34:3.01:74,3,0	1/1:14,11:23:3.01:73,3,0	./.	0/1:12,0:10:60.40:60,0,74	1/1:33,0:30:5.71:46,6,0	0/0:8,0:8:9.03:0,9,287	0/0:13,0:10:6.02:0,6,162	0/0:33,0:32:17.99:0,18,439	./.	1/1:17,4:20:5.88:146,6,0	1/1:8,5:13:3.01:57,3,0	./.
chr10	63866209	.	CCTCTT	C	3605.87	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=10.636;DP=765;FS=0.000;HRun=0;HaplotypeScore=139.5033;InbreedingCoeff=0.9947;MQ=75.88;MQ0=1;MQRankSum=-5.155;QD=50.08;ReadPosRankSum=1.987;VQSLOD=3.9903;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,56:60:99:3046,148,0	1/1:2,10:12:27.09:560,27,0	0/0:30,0:30:66.21:0,66,1838	0/0:14,0:14:36.12:0,36,959	0/0:15,0:15:39.13:0,39,1169	0/0:19,0:19:57.20:0,57,1662	0/0:43,0:43:99:0,126,3739	0/0:33,0:33:93.32:0,93,2834	0/0:31,0:31:87.30:0,87,2616	0/0:37,0:37:99:0,105,3198	0/0:14,0:14:42.14:0,42,1238	0/0:40,0:40:99:0,114,3293	0/0:34,0:34:87.28:0,87,2495	0/0:28,0:28:81.28:0,81,2440	0/0:35,0:35:99:0,99,2968	0/0:28,0:28:81.28:0,81,2446	0/0:34,0:33:81.28:0,81,2444	0/0:28,0:28:81.26:0,81,2292	0/0:24,0:24:63.22:0,63,1783	0/0:22,0:22:60.21:0,60,1776	0/0:36,0:36:99:0,105,3204	0/0:21,0:21:60.21:0,60,1816	0/0:10,0:10:27.09:0,27,779	0/0:31,0:31:93.32:0,93,2853	0/0:16,0:16:45.15:0,45,1361	0/0:37,0:37:99:0,105,3146	0/0:25,0:25:72.25:0,72,2107	0/0:8,0:8:18.06:0,18,553
chr10	63866725	.	TG	T	17205.39	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=8.819;DP=659;FS=0.712;HRun=3;HaplotypeScore=71.4931;InbreedingCoeff=0.9997;MQ=77.66;MQ0=0;MQRankSum=-3.492;QD=34.14;ReadPosRankSum=3.982;VQSLOD=5.3540;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,45:45:99:1524,123,0	1/1:0,14:14:42.13:520,42,0	0/0:16,0:15:39.10:0,39,531	0/0:20,0:19:48.09:0,48,649	0/0:17,0:17:51.17:0,51,734	1/1:0,20:20:60.19:744,60,0	1/1:1,33:34:90.28:1116,90,0	0/0:25,0:25:75.25:0,75,1080	1/1:0,23:23:63.20:781,63,0	1/1:0,23:23:66.21:817,66,0	1/1:1,9:10:27.07:323,27,0	1/1:2,37:39:99:1265,102,0	0/0:21,0:21:63.21:0,63,907	1/1:0,25:25:69.22:856,69,0	1/1:1,22:23:66.21:818,66,0	1/1:0,28:28:75.24:930,75,0	1/1:1,35:36:99:1265,102,0	1/1:1,25:26:69.22:856,69,0	1/1:2,25:27:78.19:947,78,0	1/1:2,15:17:36.11:446,36,0	1/1:1,38:39:99:1376,111,0	0/0:21,0:21:60.20:0,60,862	0/0:13,0:13:33.10:0,33,457	0/0:22,0:22:63.20:0,63,889	1/1:1,15:16:45.14:558,45,0	1/1:2,23:25:72.20:875,72,0	1/1:0,15:15:39.12:483,39,0	1/1:0,19:19:57.18:706,57,0
chr10	63869218	.	AAGAAGTGCCC	A	8335.23	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=9.242;DP=532;FS=1.116;HRun=0;HaplotypeScore=168.9382;InbreedingCoeff=0.9168;MQ=65.71;MQ0=6;MQRankSum=-11.240;QD=25.41;ReadPosRankSum=3.763;VQSLOD=4.1575;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:26:30.09:712,30,0	1/1:4,0:4:6.02:143,6,0	0/0:34,0:14:10.97:0,11,669	0/0:26,0:17:35.74:0,36,932	0/0:17,0:17:30.10:0,30,1328	1/1:19,0:18:36.01:798,36,0	1/1:21,1:22:30.10:689,30,0	0/0:43,0:42:72.23:0,72,2763	1/1:15,0:14:15:220,15,0	1/1:19,1:19:24.08:662,24,0	1/1:7,1:8:8.99:132,9,0	1/1:12,0:12:18.03:392,18,0	0/0:17,0:17:18.06:0,18,768	1/1:11,0:11:6.02:140,6,0	1/1:20,0:20:24.08:552,24,0	1/1:16,0:16:15.02:283,15,0	1/1:22,1:23:18.06:470,18,0	1/1:16,0:15:23.98:383,24,0	1/1:20,0:20:12.04:265,12,0	1/1:24,0:24:27.06:560,27,0	1/1:12,0:10:14.97:270,15,0	0/0:16,0:16:27.09:0,27,1171	0/0:23,0:23:42.13:0,42,1639	0/0:28,0:28:51.18:0,51,2289	1/1:15,1:16:23.95:507,24,0	1/1:20,2:22:29.09:662,29,0	1/1:17,0:17:12.04:294,12,0	1/1:3,1:4:9.01:200,9,0
chr10	63869219	.	AGAAGTGCCC	A	10520.46	PASS	AB=0.944;AC=41;AF=0.732;AN=56;BaseQRankSum=5.464;DP=505;FS=3.232;HRun=0;HaplotypeScore=143.8584;InbreedingCoeff=0.8733;MQ=66.94;MQ0=5;MQRankSum=-11.385;QD=31.78;ReadPosRankSum=-0.182;VQSLOD=4.6111;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:21,4:25:41.78:861,42,0	1/1:0,3:4:6.02:180,6,0	0/0:33,0:13:30.07:0,30,724	0/0:26,0:17:38.79:0,39,974	0/0:16,0:16:36.55:0,37,1314	1/1:11,5:18:44.98:988,45,0	1/1:5,11:21:36.26:796,36,0	0/0:41,0:42:38.92:0,39,2968	1/1:13,2:14:22.97:335,23,0	1/1:10,3:16:33.94:731,34,0	1/1:6,1:8:11.97:169,12,0	1/1:6,2:11:22.20:500,22,0	0/1:16,0:17:12.97:13,0,845	1/1:8,1:10:12.59:210,13,0	1/1:14,3:20:43.13:773,43,0	1/1:12,1:16:21.68:399,22,0	1/1:6,13:23:19.78:532,20,0	1/1:11,1:14:25.49:484,25,0	1/1:15,1:19:41.75:489,42,0	1/1:7,14:22:46.59:757,47,0	1/1:9,2:9:21.78:332,22,0	0/0:13,0:13:28.91:0,29,1144	0/0:21,0:21:53.09:0,53,1651	0/0:21,0:22:53.16:0,53,2165	1/1:4,6:15:26.42:565,26,0	1/1:8,11:20:36.69:760,37,0	1/1:18,0:20:26.34:439,26,0	1/1:2,1:3:9.03:208,9,0
chr10	63869221	.	AAGTGCCC	A	6924.93	PASS	AB=0.958;AC=36;AF=0.643;AN=56;BaseQRankSum=11.263;DP=476;FS=12.795;HRun=0;HaplotypeScore=134.1884;InbreedingCoeff=0.6391;MQ=70.90;MQ0=5;MQRankSum=-12.064;QD=24.47;ReadPosRankSum=5.615;VQSLOD=3.2914;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:21,1:21:20.26:558,20,0	1/1:3,1:4:6.02:131,6,0	0/0:35,0:15:44.09:0,44,1126	0/0:27,0:18:37.57:0,38,1122	0/0:16,0:16:39.12:0,39,1381	1/1:17,0:17:35.48:703,35,0	1/1:17,4:21:24.33:623,24,0	0/0:44,0:43:98.85:0,99,3338	1/1:14,0:13:13.18:165,13,0	1/1:13,0:13:2.32:509,2,0	1/1:5,1:6:8.89:91,9,0	1/1:11,0:11:17.42:348,17,0	0/0:13,0:13:29.88:0,30,913	1/1:6,1:7:6.02:137,6,0	1/1:17,1:18:24.03:516,24,0	1/1:9,2:11:16.26:302,16,0	1/1:21,2:23:18.06:359,18,0	0/1:13,1:14:3.69:312,0,4	0/1:16,0:16:14.73:301,0,15	1/1:22,0:22:1.26:474,1,0	0/1:9,0:8:0.02:142,0,0	0/0:13,0:13:33.11:0,33,1204	0/0:22,0:22:51.13:0,51,1788	0/0:23,0:23:60.20:0,60,2238	1/1:13,2:15:9.24:445,9,0	1/1:18,1:19:2.85:441,3,0	0/1:16,2:18:0.67:239,0,1	1/1:3,0:3:8.62:130,9,0
chr10	63869222	.	AGTGCCC	A	6697.09	PASS	AB=0.834;AC=36;AF=0.643;AN=56;BaseQRankSum=11.264;DP=430;FS=13.789;HRun=0;HaplotypeScore=117.8876;InbreedingCoeff=0.6146;MQ=74.66;MQ0=4;MQRankSum=-12.142;QD=28.26;ReadPosRankSum=4.997;VQSLOD=3.2056;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,4:16:16.02:556,16,0	1/1:4,0:4:6.02:127,6,0	0/0:35,0:15:44.84:0,45,1120	0/0:27,0:19:41.03:0,41,1121	0/0:16,0:16:42.07:0,42,1418	1/1:8,3:13:34.93:646,35,0	1/1:20,1:21:29.56:614,30,0	0/0:45,0:44:98.08:0,98,3296	1/1:10,0:9:6.74:130,7,0	0/1:9,2:12:0.03:489,0,0	1/1:5,0:5:8.70:86,9,0	1/1:4,2:6:16.61:323,17,0	0/0:13,0:13:33.01:0,33,997	1/1:5,0:5:8.96:156,9,0	1/1:10,2:14:24.89:487,25,0	1/1:9,1:10:16.57:284,17,0	1/1:18,1:20:18.06:340,18,0	0/1:8,1:10:8.44:297,0,8	0/1:10,3:13:14.81:272,0,15	1/1:20,2:22:6.69:520,7,0	0/1:7,1:7:4.70:130,0,5	0/0:12,0:12:33.09:0,33,1145	0/0:22,0:22:51.13:0,51,1709	0/0:23,0:23:63.21:0,63,2231	1/1:12,3:15:4.25:404,4,0	1/1:16,0:16:4.81:448,5,0	1/1:12,1:13:0.97:271,1,0	1/1:3,0:3:8.06:118,8,0
chr10	63869940	.	CTGG	C	12089.07	PASS	AC=36;AF=0.692;AN=52;BaseQRankSum=1.448;DP=548;FS=8.814;HRun=0;HaplotypeScore=90.1122;InbreedingCoeff=0.9880;MQ=38.55;MQ0=65;MQRankSum=-0.878;QD=32.32;ReadPosRankSum=4.248;VQSLOD=4.8765;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:23:51.13:0,51,792	0/0:11,0:11:33.10:0,33,495	./.	./.	0/0:27,0:27:42.14:0,42,911	1/1:0,30:29:60.20:1009,60,0	1/1:5,14:14:36.12:613,36,0	0/0:32,0:27:78.27:0,78,1710	1/1:2,23:24:51.17:869,51,0	1/1:0,27:27:78.27:1323,78,0	1/1:0,14:14:24.08:359,24,0	1/1:1,11:12:24.08:409,24,0	0/0:15,0:14:29.98:0,30,673	1/1:0,24:24:42.14:715,42,0	1/1:2,18:17:39.13:664,39,0	1/1:1,23:23:51.17:869,51,0	1/1:4,17:18:30.10:511,30,0	1/1:8,19:19:30.10:498,30,0	1/1:3,15:16:39.13:611,39,0	1/1:1,13:15:30.10:466,30,0	1/1:4,11:10:18.05:293,18,0	0/0:11,0:11:21.07:0,21,449	0/0:11,0:11:15.05:0,15,324	0/0:13,0:10:12.04:0,12,243	1/1:2,21:23:42.14:715,42,0	1/1:2,20:21:48.63:800,49,0	1/1:1,26:27:60.20:1007,60,0	1/1:0,11:11:21.07:358,21,0
chr10	63870305	.	C	CGT	5462.56	PASS	AB=0.865;AC=35;AF=0.625;AN=56;BaseQRankSum=-2.424;DP=803;FS=14.927;HRun=0;HaplotypeScore=287.4863;InbreedingCoeff=0.1031;MQ=54.69;MQ0=12;MQRankSum=-2.089;QD=8.63;ReadPosRankSum=2.041;VQSLOD=3.3573;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:26:0.40:20,0,0	0/1:5,0:5:0.24:19,0,0	0/0:49,0:23:3.01:0,3,34	0/1:52,0:32:7.84:8,0,24	0/1:24,8:32:8.18:354,0,8	1/1:14,7:20:16.01:324,16,0	0/1:35,7:41:81.94:366,0,82	1/1:27,14:41:44.25:487,44,0	0/1:14,5:18:37.18:216,0,37	1/1:35,8:43:9.24:510,9,0	1/1:15,3:14:15.52:225,16,0	0/1:24,4:27:22.69:121,0,23	0/0:23,0:22:26.16:0,26,331	0/1:22,8:30:30.04:375,0,30	0/1:24,4:28:40.52:177,0,41	1/1:16,5:21:18.02:300,18,0	1/1:17,2:19:18.10:179,18,0	1/1:8,1:8:1.42:45,1,0	1/1:30,4:31:26.53:307,27,0	1/1:27,2:29:16.07:236,16,0	0/1:34,7:41:20.70:204,0,21	0/0:37,0:38:28.48:0,28,368	0/0:18,0:21:24.19:0,24,250	0/0:37,0:38:55.40:0,55,566	1/1:17,3:20:11.93:181,12,0	0/1:32,2:34:81:258,0,81	1/1:16,6:21:7.44:300,7,0	0/1:10,5:13:46.94:252,0,47
chr10	63870341	.	G	GTGTA	10516.02	PASS	AB=0.789;AC=28;AF=0.500;AN=56;BaseQRankSum=0.411;DP=982;FS=91.773;HRun=0;HaplotypeScore=429.7789;InbreedingCoeff=-0.2969;MQ=34.26;MQ0=26;MQRankSum=-7.993;QD=14.73;ReadPosRankSum=-0.494;VQSLOD=2.0784;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:13,10:22:11.22:335,0,11	0/1:7,2:9:52.34:124,0,52	0/0:72,0:18:38.82:0,39,656	0/0:78,0:23:44.50:0,45,690	0/1:54,0:55:87.18:87,0,928	0/1:14,10:23:60.22:500,0,60	0/1:20,12:32:29.71:466,0,30	0/0:64,0:62:99:0,118,2141	1/1:7,13:21:32.14:770,32,0	0/1:44,12:55:99:977,0,334	0/1:24,9:31:99:260,0,174	0/1:11,10:21:11.51:548,0,12	0/0:22,0:22:43.58:0,44,637	0/1:23,10:33:99:428,0,125	0/1:19,13:31:57.31:623,0,57	0/1:14,12:27:12.72:596,0,13	1/1:8,7:14:17.85:506,18,0	1/1:6,2:7:6.32:162,6,0	1/1:18,6:21:8.22:597,8,0	0/1:32,8:41:99:368,0,164	1/1:17,12:27:21.50:530,21,0	0/1:64,0:64:99:101,0,1072	0/1:38,0:38:52.47:52,0,697	0/0:31,0:31:50.68:0,51,767	0/1:21,5:26:99:317,0,187	0/1:37,15:50:99:889,0,505	0/1:14,13:26:35.96:767,0,36	0/1:14,8:21:99:510,0,233
chr10	63870343	.	GTA	G	1569.97	PASS	AB=0.848;AC=21;AF=0.375;AN=56;BaseQRankSum=10.194;DP=965;FS=69.297;HRun=0;HaplotypeScore=377.9209;InbreedingCoeff=-0.5153;MQ=35.07;MQ0=27;MQRankSum=-8.446;QD=2.31;ReadPosRankSum=2.996;VQSLOD=-0.6364;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:22,1:22:13.64:14,0,75	0/1:6,3:9:3.43:17,0,3	0/0:75,0:20:51.44:0,51,762	0/0:71,1:21:17.61:0,18,692	0/0:54,1:55:18.91:0,19,1026	0/1:19,4:22:7.40:7,0,188	0/1:28,4:31:43.09:62,0,43	0/1:57,7:62:52.88:53,0,2116	0/1:17,3:20:2.02:2,0,163	0/1:32,22:53:99:414,0,507	0/1:23,11:31:4.22:84,0,4	0/0:18,3:21:11.28:0,11,117	0/1:22,0:22:5.88:6,0,534	0/1:24,7:32:22.16:22,0,70	0/1:21,11:31:31.14:31,0,169	0/1:21,6:27:55.16:55,0,64	0/1:11,3:13:36.39:36,0,137	0/0:8,0:7:13.09:0,13,108	0/0:19,2:19:3.55:0,4,389	0/1:27,14:41:60.57:129,0,61	0/1:26,1:25:7.68:8,0,90	0/1:62,2:64:98.81:99,0,1011	0/1:37,0:37:52.72:53,0,653	0/0:30,0:30:24.17:0,24,792	0/1:21,5:26:49.77:73,0,50	0/1:39,10:48:99:327,0,378	0/1:20,6:26:99:101,0,201	0/1:15,7:21:99:131,0,217
chr10	63876479	.	ATTT	A	6755.62	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-0.338;DP=555;FS=19.392;HRun=15;HaplotypeScore=83.5084;InbreedingCoeff=0.9677;MQ=64.98;MQ0=4;MQRankSum=-2.641;QD=19.52;ReadPosRankSum=4.281;VQSLOD=2.1279;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:41:36.87:0,37,147	0/0:2,0:6:2.96:0,3,6	0/0:35,0:14:18.02:0,18,246	0/0:31,0:13:11.56:0,12,102	0/0:15,0:15:36.12:0,36,624	1/1:3,13:17:25.97:301,26,0	1/1:6,20:28:52.28:587,52,0	0/0:17,0:24:49.35:0,49,731	1/1:7,9:16:29.90:336,30,0	1/1:7,11:18:32.86:346,33,0	1/1:3,16:19:35.92:398,36,0	1/1:4,11:16:26.87:286,27,0	0/0:15,0:18:42.12:0,42,709	1/1:4,17:21:37.16:434,37,0	1/1:8,11:20:25.01:313,25,0	1/1:4,9:14:19.40:233,19,0	1/1:6,23:30:31.87:565,32,0	1/1:5,18:23:45.03:504,45,0	1/1:6,16:22:51:572,51,0	1/1:6,12:18:29.92:335,30,0	1/1:7,11:21:23.12:222,23,0	0/0:10,0:12:30.06:0,30,486	0/0:9,0:11:27.02:0,27,359	0/0:14,0:16:39.08:0,39,621	1/1:3,13:17:32.56:298,33,0	1/1:4,14:18:41.93:457,42,0	1/1:3,11:14:24.06:269,24,0	1/1:2,10:13:25.55:300,26,0
chr10	63876492	.	TTTG	T	1469	PASS	AB=0.992;AC=20;AF=0.357;AN=56;BaseQRankSum=10.764;DP=517;FS=13.680;HRun=0;HaplotypeScore=97.2994;InbreedingCoeff=-0.1448;MQ=73.09;MQ0=4;MQRankSum=-1.951;QD=4.63;ReadPosRankSum=10.905;VQSLOD=-0.7128;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:87.25:0,87,515	0/0:6,0:6:11.48:0,11,75	0/0:29,0:14:25.10:0,25,360	0/0:27,0:15:16.15:0,16,133	0/0:13,0:13:39.08:0,39,612	0/1:15,0:15:5.04:98,0,5	0/1:26,1:27:54.70:126,0,55	0/0:24,0:24:68.94:0,69,946	1/1:10,1:11:11.61:110,12,0	0/1:17,0:16:75.08:86,0,75	0/1:20,0:20:67.45:75,0,67	0/1:14,0:14:26.61:58,0,27	0/0:19,0:19:51.07:0,51,725	0/1:20,0:20:10.82:98,0,11	0/1:18,0:18:57.32:57,0,57	0/1:13,0:13:34.06:71,0,34	0/1:29,0:29:46.56:132,0,47	0/1:21,1:22:4.23:175,0,4	0/1:21,1:22:30.09:157,0,30	0/1:15,0:15:9.80:73,0,10	0/1:16,0:16:24.66:25,0,44	0/0:13,0:13:39.09:0,39,630	0/0:11,0:11:27.07:0,27,416	0/0:16,0:16:48.11:0,48,742	0/1:16,0:16:17.39:38,0,17	0/1:18,0:18:50.91:105,0,51	0/1:12,0:12:1.32:56,0,1	1/1:12,0:12:14.57:99,15,0
chr10	63878431	.	T	TACACACAC	8108.14	PASS	AB=0.821;AC=35;AF=0.673;AN=52;BaseQRankSum=-0.603;DP=769;FS=3.603;HRun=0;HaplotypeScore=240.5452;InbreedingCoeff=0.7491;MQ=57.67;MQ0=17;MQRankSum=-7.072;QD=17.74;ReadPosRankSum=-4.095;VQSLOD=3.1923;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:44:47.73:0,48,1009	0/0:7,0:8:9.03:0,9,206	./.	./.	0/0:10,0:23:21.06:0,21,361	1/1:19,5:28:18.06:638,18,0	1/1:29,4:38:10.68:294,11,0	1/1:25,0:25:9.46:112,9,0	1/1:16,5:24:5.95:245,6,0	1/1:31,0:31:36.10:1005,36,0	1/1:8,0:8:6.02:130,6,0	1/1:37,2:39:29.79:744,30,0	0/0:21,0:28:39.04:0,39,1082	1/1:24,10:39:24.30:860,24,0	1/1:24,5:33:14.97:506,15,0	1/1:15,5:23:14.61:556,15,0	1/1:27,4:33:15.27:492,15,0	0/1:18,0:23:99:149,0,113	1/1:12,2:18:24.54:684,25,0	1/1:14,0:14:6.01:124,6,0	0/0:26,0:26:0.47:0,0,1	0/0:20,0:20:12.04:0,12,271	0/0:10,0:13:14.94:0,15,277	0/0:41,0:43:66.05:0,66,1361	1/1:26,0:26:14.78:283,15,0	1/1:22,3:28:37.01:1009,37,0	1/1:13,4:23:9:270,9,0	1/1:2,0:2:1.55:4,2,0
chr10	63878467	.	C	CACACACACAC	7399.43	PASS	AB=0.943;AC=37;AF=0.685;AN=54;BaseQRankSum=1.148;DP=770;FS=1.212;HRun=0;HaplotypeScore=276.9018;InbreedingCoeff=0.6963;MQ=53.74;MQ0=7;MQRankSum=-6.918;QD=13.96;ReadPosRankSum=-4.879;VQSLOD=2.4638;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:48.09:0,48,1140	0/0:8,0:8:8.92:0,9,247	0/1:26,0:16:0:0,0,0	./.	0/0:25,0:25:20.95:0,21,444	1/1:23,0:23:15.02:412,15,0	1/1:31,0:31:1.44:88,1,0	1/1:33,0:33:12.47:151,12,0	1/1:26,0:26:8.89:240,9,0	1/1:34,0:34:48.14:1328,48,0	1/1:7,0:7:6.02:130,6,0	1/1:45,0:44:32.59:847,33,0	0/0:37,0:37:39.04:0,39,1286	1/1:33,0:32:26.54:689,27,0	1/1:30,0:30:8.28:184,8,0	1/1:27,0:27:14.47:410,14,0	1/1:34,0:34:9.85:268,10,0	0/1:25,0:25:59.11:510,0,59	1/1:13,0:12:24.55:553,25,0	1/1:18,0:18:6:124,6,0	0/1:38,8:48:0.07:0,0,0	0/0:26,0:26:12.04:0,12,304	0/0:16,0:17:15.04:0,15,342	0/0:52,0:52:65.99:0,66,1665	1/1:30,0:30:14.83:284,15,0	1/1:27,0:27:36.12:939,36,0	1/1:15,0:15:5.90:239,6,0	1/1:5,0:4:1.55:4,2,0
chr10	63883776	.	G	GA	5750.98	PASS	AB=1.000;AC=39;AF=0.750;AN=52;BaseQRankSum=0.324;DP=373;FS=3.888;HRun=6;HaplotypeScore=79.5953;InbreedingCoeff=0.8110;MQ=46.96;MQ0=5;MQRankSum=-4.935;QD=20.54;ReadPosRankSum=0.443;VQSLOD=4.2301;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:16,15:31:51.15:617,51,0	1/1:1,3:4:6.02:71,6,0	./.	0/1:4,0:3:0.13:0,0,11	0/0:15,0:13:0.84:0,1,154	1/1:3,10:13:30.09:371,30,0	1/1:7,13:17:42.05:491,42,0	0/0:18,0:17:30.03:0,30,298	1/1:5,4:9:20.92:222,21,0	1/1:4,7:11:21.07:264,21,0	1/1:6,1:5:3.01:38,3,0	1/1:3,12:15:35.78:420,36,0	0/0:10,0:10:11.88:0,12,122	1/1:6,6:12:23.98:265,24,0	1/1:8,8:16:44.84:465,45,0	1/1:9,5:14:24.02:272,24,0	1/1:17,11:27:39.58:388,40,0	1/1:6,19:24:39.12:477,39,0	1/1:10,9:17:30.05:354,30,0	1/1:7,3:10:15.04:173,15,0	./.	0/0:15,0:15:27.06:0,27,274	0/0:5,0:5:12.03:0,12,122	0/0:25,0:25:35.42:0,35,362	1/1:5,1:6:5.50:47,6,0	1/1:5,4:9:15.04:187,15,0	1/1:9,8:15:24.95:291,25,0	1/1:0,10:10:27.09:339,27,0
chr10	63883787	.	C	CA	1179.75	PASS	AB=0.813;AC=34;AF=0.607;AN=56;BaseQRankSum=-0.594;DP=398;FS=8.580;HRun=16;HaplotypeScore=74.3316;InbreedingCoeff=-0.0187;MQ=50.56;MQ0=4;MQRankSum=-3.017;QD=3.47;ReadPosRankSum=-2.676;VQSLOD=-0.5498;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:27:22.19:0,22,73	0/1:2,0:2:0:0,0,0	0/0:7,0:2:2.72:0,3,12	0/0:5,0:5:2.16:0,2,8	1/1:10,0:9:4.29:18,4,0	0/1:9,5:16:22.73:47,0,23	0/1:13,6:18:32.25:54,0,32	0/1:16,7:21:26.44:86,0,26	0/1:5,2:10:2.54:33,0,3	1/1:6,8:14:7.17:145,7,0	1/1:6,1:6:1.31:56,1,0	1/1:14,2:16:1.73:64,2,0	0/1:14,0:14:8.28:8,0,40	1/1:12,1:14:4.39:49,4,0	1/1:11,3:16:0.29:104,0,0	1/1:7,8:14:7.85:90,8,0	0/1:19,2:24:4.22:110,0,4	0/1:17,6:23:9.30:117,0,9	1/1:25,1:26:1.29:100,1,0	0/1:8,6:14:43.42:49,0,43	0/0:3,0:5:2.82:0,3,16	0/0:12,0:13:13.70:0,14,73	0/1:4,0:4:0:0,0,0	0/1:24,1:26:12.95:13,0,130	0/1:3,3:7:5.74:63,0,6	1/1:5,6:11:8.09:43,8,0	1/1:8,5:11:5.98:48,6,0	1/1:9,1:10:3.46:25,3,0
chr10	63884507	.	CG	C	368.81	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=1.450;DP=315;FS=1.279;HRun=4;HaplotypeScore=41.9019;InbreedingCoeff=0.7061;MQ=108.43;MQ0=0;MQRankSum=-3.146;QD=19.41;ReadPosRankSum=-0.102;VQSLOD=2.6145;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,13:13:27.03:306,27,0	1/1:0,6:6:15.05:179,15,0	0/0:28,0:28:69.27:0,69,1042	0/0:17,0:17:36.11:0,36,477	0/0:6,0:5:15.01:0,15,158	0/0:4,0:4:9.03:0,9,126	0/0:23,0:23:63.15:0,63,842	0/0:8,0:8:24.06:0,24,303	0/0:10,0:10:27.09:0,27,375	0/0:11,0:11:30.10:0,30,419	0/0:3,0:3:9.03:0,9,114	0/0:12,0:12:36.10:0,36,471	0/0:13,0:13:39.13:0,39,538	0/0:14,0:14:42.14:0,42,582	0/0:4,0:4:12.04:0,12,168	0/0:7,0:7:21.07:0,21,289	0/0:13,0:13:39.13:0,39,545	0/0:15,0:15:45.15:0,45,630	0/0:8,0:8:24.06:0,24,317	0/0:3,0:3:9.03:0,9,126	0/0:64,0:64:99:0,184,2487	0/0:4,0:4:9.03:0,9,123	0/0:2,0:2:3:0,3,25	0/0:10,0:10:30.10:0,30,419	0/0:4,0:4:12.04:0,12,166	0/0:1,0:1:3.01:0,3,42	0/0:9,0:9:27.09:0,27,377	0/0:3,0:3:9:0,9,106
chr10	63885073	.	T	TCCTGGC	1287.62	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-1.523;DP=489;FS=2.152;HRun=0;HaplotypeScore=133.8537;InbreedingCoeff=0.7751;MQ=75.99;MQ0=0;MQRankSum=-6.433;QD=35.77;ReadPosRankSum=-0.909;VQSLOD=3.5361;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,12:31:36.08:1111,36,0	1/1:3,2:5:9.03:291,9,0	0/0:15,0:15:33.09:0,33,628	0/0:12,0:9:3.01:0,3,43	0/0:16,0:16:36.11:0,36,681	0/0:14,0:14:36.12:0,36,733	0/0:26,0:26:54.19:0,54,1154	0/0:16,0:16:27.09:0,27,513	0/0:16,0:16:27.09:0,27,577	0/0:16,0:16:33.11:0,33,694	0/0:10,0:10:15.05:0,15,321	0/0:23,0:23:51.17:0,51,1088	0/0:22,0:22:51.14:0,51,1047	0/0:10,0:10:15.05:0,15,321	0/0:19,0:19:42.14:0,42,889	0/0:12,0:12:21.07:0,21,449	0/0:36,0:36:72.25:0,72,1486	0/0:33,0:33:72.25:0,72,1507	0/0:13,0:13:30.10:0,30,631	0/0:6,0:6:9.03:0,9,192	0/0:51,0:51:81.11:0,81,1719	0/0:5,0:5:3.01:0,3,64	0/0:10,0:10:27.05:0,27,533	0/0:17,0:17:39.11:0,39,757	0/0:14,0:14:30.10:0,30,641	0/0:21,0:21:39.13:0,39,802	0/0:10,0:10:21.07:0,21,449	0/0:10,0:10:24.08:0,24,513
chr10	63885140	.	A	AAC	17497.13	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-14.616;DP=558;FS=2.001;HRun=0;HaplotypeScore=59.2584;InbreedingCoeff=0.9990;MQ=96.39;MQ0=0;MQRankSum=-5.491;QD=45.57;ReadPosRankSum=3.018;VQSLOD=6.4818;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:84.17:0,84,1110	0/0:7,0:7:21.07:0,21,293	0/0:30,0:30:81.13:0,81,1087	0/0:24,0:24:63.11:0,63,828	1/1:1,16:18:42.06:699,42,0	1/1:3,11:15:36.12:643,36,0	1/1:2,26:28:66.23:1188,66,0	0/0:22,0:22:60.20:0,60,827	1/1:0,17:18:48.16:863,48,0	1/1:2,15:17:42.13:726,42,0	1/1:2,15:18:42.14:752,42,0	1/1:1,24:25:63.22:1134,63,0	0/0:16,0:16:48.13:0,48,638	1/1:0,10:10:27.09:485,27,0	1/1:0,18:19:45.15:810,45,0	1/1:4,12:16:42.14:737,42,0	1/1:1,35:37:90.31:1615,90,0	1/1:1,25:26:72.25:1281,72,0	1/1:0,17:17:51.14:850,51,0	1/1:1,13:14:36.04:611,36,0	1/1:0,28:28:81.28:1457,81,0	0/0:11,0:11:30.10:0,30,419	0/0:19,0:19:54.16:0,54,735	0/0:16,0:16:39.12:0,39,530	1/1:2,15:17:39.13:701,39,0	1/1:1,26:27:78.23:1343,78,0	1/1:1,18:19:51.01:901,51,0	1/1:1,13:14:39.13:701,39,0
chr10	63891489	.	CGCTGGGCCA	C	1124.05	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.543;DP=519;FS=39.257;HRun=0;HaplotypeScore=137.8445;InbreedingCoeff=0.8762;MQ=70.89;MQ0=0;MQRankSum=-6.790;QD=38.76;ReadPosRankSum=-0.913;VQSLOD=1.6160;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,23:25:45.08:1142,45,0	1/1:0,4:4:3.01:91,3,0	0/0:8,0:8:17.89:0,18,612	0/0:5,0:6:15.04:0,15,400	0/0:8,0:8:21.07:0,21,993	0/0:17,0:17:48.16:0,48,2045	0/0:34,0:34:96.33:0,96,4602	0/0:19,0:19:54.18:0,54,2385	0/0:11,0:11:30.10:0,30,1327	0/0:19,0:19:48.16:0,48,1857	0/0:7,0:7:21.07:0,21,850	0/0:30,0:30:87.30:0,87,4091	0/0:12,0:12:36.09:0,36,1549	0/0:22,0:22:63.22:0,63,2874	0/0:15,0:15:45.15:0,45,1952	0/0:9,0:9:24.08:0,24,1160	0/0:39,0:39:99:0,117,5225	0/0:34,0:34:96.33:0,96,4525	0/0:11,0:11:30.10:0,30,1322	0/0:6,0:6:15.05:0,15,642	0/0:65,0:65:99:0,178,7866	0/0:10,0:10:30.10:0,30,1421	0/0:10,0:10:27.09:0,27,1257	0/0:37,0:37:99:0,105,4925	0/0:14,0:14:33.10:0,33,1436	0/0:15,0:15:39.13:0,39,1700	0/0:14,0:14:42.14:0,42,1999	0/0:18,0:18:48.16:0,48,2207
chr10	63891657	.	C	CT	15177.68	PASS	AB=0.571;AC=35;AF=0.625;AN=56;BaseQRankSum=-14.682;DP=654;FS=5.316;HRun=1;HaplotypeScore=64.9721;InbreedingCoeff=0.9229;MQ=86.02;MQ0=0;MQRankSum=-3.933;QD=35.46;ReadPosRankSum=4.438;VQSLOD=4.9706;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:93.16:0,93,1133	0/0:8,0:8:24.06:0,24,296	0/0:28,0:28:71.05:0,71,870	0/0:24,0:24:66.09:0,66,781	0/0:24,0:24:69.11:0,69,805	1/1:1,15:16:33.11:487,33,0	1/1:2,32:34:81.27:1198,81,0	0/0:20,0:20:57.17:0,57,715	1/1:0,17:17:39.13:574,39,0	1/1:1,21:22:63.18:869,63,0	1/1:1,7:8:21.03:286,21,0	1/1:1,35:36:93.31:1364,93,0	0/0:26,0:26:78.21:0,78,992	1/1:3,31:34:81.27:1185,81,0	1/1:2,26:28:72.24:1064,72,0	1/1:3,27:30:66.22:977,66,0	1/1:0,42:42:99:1598,108,0	1/1:0,14:14:42.14:621,42,0	1/1:2,18:20:54.13:738,54,0	1/1:2,15:17:42.06:544,42,0	1/1:0,28:28:66.22:977,66,0	0/0:21,0:21:51.15:0,51,647	0/0:14,0:14:42.09:0,42,500	0/0:26,0:26:75.06:0,75,847	1/1:0,20:21:42.12:600,42,0	1/1:1,28:29:81.18:1073,81,0	1/1:0,16:16:42.14:621,42,0	0/1:4,12:16:99:402,0,113
chr10	63892448	.	A	ATC	2579.62	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=2.270;DP=625;FS=8.475;HRun=0;HaplotypeScore=75.3286;InbreedingCoeff=0.9989;MQ=80.64;MQ0=0;MQRankSum=-0.415;QD=48.67;ReadPosRankSum=0.796;VQSLOD=4.5089;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,37:37:99:1945,108,0	1/1:0,16:16:42.14:756,42,0	0/0:16,0:16:30.73:0,31,553	0/0:16,0:16:48.16:0,48,664	0/0:18,0:18:54.18:0,54,756	0/0:23,0:23:66.22:0,66,924	0/0:37,0:37:99:0,111,1554	0/0:30,0:30:84.27:0,84,1159	0/0:19,0:19:54.18:0,54,754	0/0:19,0:19:42.14:0,42,586	0/0:9,0:9:27.09:0,27,378	0/0:27,0:27:75.25:0,75,1050	0/0:18,0:18:51.16:0,51,696	0/0:22,0:22:60.20:0,60,837	0/0:31,0:31:84.24:0,84,1116	0/0:27,0:27:81.27:0,81,1132	0/0:32,0:32:93.31:0,93,1300	0/0:30,0:30:84.28:0,84,1177	0/0:12,0:12:33.11:0,33,462	0/0:14,0:14:42.14:0,42,588	0/0:39,0:39:99:0,108,1513	0/0:22,0:22:66.22:0,66,924	0/0:13,0:13:36.12:0,36,503	0/0:27,0:27:78.24:0,78,1074	0/0:15,0:15:36.12:0,36,504	0/0:19,0:19:54.18:0,54,755	0/0:23,0:22:69.23:0,69,965	0/0:14,0:14:42.14:0,42,585
chr10	63892811	.	G	GA	1457.42	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=1.651;DP=604;FS=1.303;HRun=5;HaplotypeScore=62.9766;InbreedingCoeff=0.9912;MQ=89.51;MQ0=0;MQRankSum=-5.385;QD=33.12;ReadPosRankSum=-0.102;VQSLOD=3.9852;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,29:30:81.26:1066,81,0	1/1:0,14:14:39.13:513,39,0	0/0:26,0:26:65.87:0,66,665	0/0:21,0:21:60.13:0,60,620	0/0:10,0:10:24.06:0,24,258	0/0:17,0:17:42.08:0,42,443	0/0:20,0:20:57.14:0,57,613	0/0:20,0:20:48.12:0,48,516	0/0:28,0:28:81.20:0,81,871	0/0:16,0:16:39.09:0,39,419	0/0:11,0:11:23.15:0,23,247	0/0:22,0:22:54.13:0,54,580	0/0:22,0:22:51.13:0,51,548	0/0:20,0:20:57.13:0,57,605	0/0:22,0:21:60.15:0,60,645	0/0:28,0:28:78.18:0,78,829	0/0:39,0:39:99:0,111,1184	0/0:26,0:26:78.20:0,78,838	0/0:17,0:17:51.13:0,51,548	0/0:17,0:17:39.08:0,39,411	0/0:41,0:41:99:0,114,1217	0/0:14,0:14:42.11:0,42,451	0/0:13,0:13:36.09:0,36,386	0/0:33,0:33:90.19:0,90,955	0/0:8,0:8:18.04:0,18,193	0/0:37,0:37:87.18:0,87,920	0/0:23,0:23:60.15:0,60,645	0/0:9,0:9:21.05:0,21,226
chr10	63894118	.	G	GCTAA	2901.47	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-6.580;DP=702;FS=13.474;HRun=0;HaplotypeScore=115.4758;InbreedingCoeff=0.9910;MQ=87.37;MQ0=0;MQRankSum=-6.321;QD=61.73;ReadPosRankSum=1.123;VQSLOD=5.1725;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,28:33:90.27:2309,90,0	1/1:2,9:14:27.09:714,27,0	0/0:26,0:26:68.24:0,68,1150	0/0:24,0:24:66.16:0,66,1134	0/0:19,0:19:51.17:0,51,951	0/0:11,0:11:33.11:0,33,616	0/0:27,0:27:72.25:0,72,1344	0/0:32,0:32:87.28:0,87,1543	0/0:31,0:31:87.28:0,87,1582	0/0:17,0:17:42.14:0,42,753	0/0:10,0:10:18.06:0,18,335	0/0:31,0:31:87.30:0,87,1623	0/0:23,0:23:63.22:0,63,1164	0/0:34,0:34:99:0,102,1863	0/0:28,0:28:81.26:0,81,1480	0/0:33,0:33:99:0,99,1793	0/0:53,0:53:99:0,141,2630	0/0:29,0:29:87.26:0,87,1586	0/0:27,0:27:75.23:0,75,1322	0/0:10,0:10:27.09:0,27,503	0/0:55,0:55:99:0,159,2965	0/0:14,0:14:36.11:0,36,592	0/0:10,0:10:27.02:0,27,466	0/0:39,0:38:99:0,108,1984	0/0:9,0:9:24.08:0,24,448	0/0:25,0:25:60.20:0,60,1080	0/0:31,0:30:93.31:0,93,1704	0/0:7,0:7:21.07:0,21,392
chr10	63897791	.	TC	T	1852.79	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=11.338;DP=729;FS=1.750;HRun=1;HaplotypeScore=72.5039;InbreedingCoeff=0.9839;MQ=89.24;MQ0=0;MQRankSum=-3.944;QD=31.94;ReadPosRankSum=2.226;VQSLOD=3.4854;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,54:54:99:1821,147,0	1/1:0,4:4:12.04:149,12,0	0/0:33,0:33:93.31:0,93,1443	0/0:22,0:22:50.99:0,51,692	0/0:25,0:25:75.24:0,75,1159	0/0:16,0:16:48.16:0,48,766	0/0:26,0:26:78.25:0,78,1221	0/0:39,0:39:99:0,117,1822	0/0:22,0:22:66.22:0,66,1043	0/0:38,0:38:99:0,114,1803	0/0:22,0:22:66.21:0,66,1029	0/0:30,0:30:90.24:0,90,1383	0/0:22,0:22:60.17:0,60,912	0/0:17,0:17:51.17:0,51,815	0/0:40,0:40:99:0,120,1892	0/0:39,0:39:99:0,117,1809	0/0:38,0:38:99:0,114,1793	0/0:22,0:22:66.22:0,66,1046	0/0:21,0:21:63.21:0,63,983	0/0:19,0:19:57.19:0,57,908	0/0:20,0:20:60.19:0,60,933	0/0:21,0:21:63.16:0,63,951	0/0:22,0:22:63.20:0,63,974	0/0:24,0:24:72.25:0,72,1144	0/0:20,0:20:60.17:0,60,930	0/0:28,0:28:81.27:0,81,1274	0/0:25,0:25:75.24:0,75,1174	0/0:20,0:20:60.20:0,60,959
chr10	63899616	.	TTCTCTCTCTCTC	T	3891	PASS	AC=36;AF=0.667;AN=54;BaseQRankSum=3.115;DP=381;FS=2.946;HRun=0;HaplotypeScore=107.0697;InbreedingCoeff=0.6615;MQ=54.79;MQ0=26;MQRankSum=-4.048;QD=19.36;ReadPosRankSum=1.344;VQSLOD=2.2520;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:32.44:0,32,1158	0/0:8,0:8:9.03:0,9,400	0/0:35,0:8:0.47:0,0,1	./.	0/0:7,0:6:6.02:0,6,242	1/1:4,5:8:6.02:208,6,0	1/1:7,7:14:9.03:312,9,0	0/0:22,0:22:21.06:0,21,429	1/1:6,7:13:12.02:335,12,0	1/1:8,5:11:10.89:325,11,0	1/1:3,0:3:3.01:74,3,0	1/1:8,0:8:10.50:192,10,0	0/0:8,0:9:12.04:0,12,484	1/1:7,4:11:6.02:208,6,0	1/1:8,6:13:9.03:312,9,0	1/1:5,10:14:8.95:312,9,0	1/1:3,2:5:3.01:104,3,0	1/1:9,1:10:3.06:258,3,0	1/1:11,0:11:6.02:108,6,0	1/1:8,4:11:5.98:58,6,0	1/1:15,1:15:2.84:14,3,0	0/0:11,0:11:6.02:0,6,142	0/0:9,0:9:11.33:0,11,521	0/0:18,0:19:15.19:0,15,789	1/1:10,7:17:15.05:515,15,0	1/1:6,4:10:12.04:282,12,0	1/1:11,3:15:9.03:225,9,0	1/1:5,0:4:3.01:51,3,0
chr10	63899656	.	C	CTCTT	270.68	PASS	AB=1.000;AC=6;AF=0.111;AN=54;BaseQRankSum=-0.932;DP=272;FS=1.276;HRun=0;HaplotypeScore=67.4535;InbreedingCoeff=0.6325;MQ=52.18;MQ0=17;MQRankSum=1.297;QD=4.92;ReadPosRankSum=1.443;VQSLOD=1.5775;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:13:18.69:212,19,0	1/1:1,4:5:6.02:166,6,0	0/0:24,0:5:5.92:0,6,50	0/1:31,0:7:0.22:0,0,0	0/0:9,0:9:23.98:0,24,230	0/0:6,0:6:6.02:0,6,77	0/0:10,0:10:17.99:0,18,164	0/0:9,0:8:23.97:0,24,204	0/0:8,0:8:11.97:0,12,133	0/0:8,0:8:17.40:0,17,166	0/1:4,0:1:0:0,0,0	0/0:8,0:8:18.31:0,18,132	0/0:9,0:9:23.97:0,24,236	0/0:7,0:7:5.88:0,6,53	0/0:13,0:12:24:0,24,238	0/0:13,0:12:14.83:0,15,164	0/0:5,0:5:8.96:0,9,82	0/0:8,0:7:17.26:0,17,133	0/0:5,0:4:8.96:0,9,81	0/0:7,0:7:5.95:0,6,43	0/0:13,0:13:16.79:0,17,127	0/0:7,0:5:11.99:0,12,100	0/0:7,0:7:20.67:0,21,192	0/0:12,0:11:21.49:0,21,337	0/0:12,0:12:22.58:0,23,233	0/0:8,0:8:12.64:0,13,101	0/0:8,0:8:14.95:0,15,141	./.
chr10	63899707	.	CTCCTCCTCTTCT	C	448.77	PASS	AC=2;AF=0.037;AN=54;BaseQRankSum=4.953;DP=379;FS=0.000;HRun=0;HaplotypeScore=114.1731;InbreedingCoeff=0.5273;MQ=66.70;MQ0=11;MQRankSum=-2.502;QD=22.44;ReadPosRankSum=-1.696;VQSLOD=1.6733;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:8,12:19:18.06:539,18,0	./.	0/0:34,0:18:8.43:0,8,404	0/0:45,0:22:0.09:0,0,1291	0/0:9,0:9:21.07:0,21,1081	0/0:6,0:6:18.06:0,18,950	0/0:21,0:21:60.21:0,60,3101	0/0:16,0:16:21.07:0,21,894	0/0:15,0:15:33.11:0,33,1848	0/0:5,0:5:9.03:0,9,535	0/0:1,0:1:3.01:0,3,160	0/0:17,0:17:48.16:0,48,2432	0/0:11,0:11:33.11:0,33,1604	0/0:12,0:12:33.11:0,33,1865	0/0:18,0:18:45.11:0,45,2260	0/0:16,0:16:48.16:0,48,2657	0/0:11,0:11:30.10:0,30,1605	0/0:19,0:18:51.18:0,51,2730	0/0:9,0:7:15.05:0,15,606	0/0:5,0:5:6.02:0,6,354	0/0:19,0:19:54.19:0,54,2888	0/0:13,0:13:36.12:0,36,2003	0/0:8,0:8:24.08:0,24,1242	0/0:18,0:18:39.13:0,39,2180	0/0:7,0:7:21.07:0,21,1070	0/0:9,0:9:27.05:0,27,1247	0/0:11,0:11:30.10:0,30,1607	0/0:2,0:2:6.02:0,6,309
chr10	63901743	.	A	ACGTGTGGG	3741.06	PASS	AB=0.984;AC=6;AF=0.107;AN=56;BaseQRankSum=-1.080;DP=713;FS=16.798;HRun=0;HaplotypeScore=177.9217;InbreedingCoeff=0.6806;MQ=69.03;MQ0=0;MQRankSum=-9.250;QD=41.57;ReadPosRankSum=-5.072;VQSLOD=1.3807;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:15,23:40:78.74:2834,79,0	1/1:5,6:12:21.07:853,21,0	0/1:7,0:7:0.59:1,0,146	0/0:12,0:12:12.02:0,12,219	0/0:27,0:27:69.20:0,69,1728	0/0:17,0:17:48.16:0,48,1241	0/0:52,0:52:90.31:0,90,2327	0/0:23,0:23:36.09:0,36,875	0/0:24,0:24:60.21:0,60,1546	0/0:34,0:34:81.28:0,81,2083	0/0:16,0:16:36.11:0,36,853	0/0:33,0:33:78.27:0,78,2025	0/0:18,0:18:48.16:0,48,1247	0/0:35,0:35:93.32:0,93,2408	0/0:36,0:36:81.25:0,81,1989	0/0:17,0:17:39.12:0,39,959	0/0:26,0:26:63.22:0,63,1636	0/0:28,0:28:75.26:0,75,1940	0/0:29,0:29:60.19:0,60,1402	0/0:21,0:21:51.18:0,51,1318	0/0:66,0:66:99:0,144,3588	0/0:18,0:18:39.13:0,39,1012	0/0:23,0:23:51.16:0,51,1272	0/0:28,0:28:60.15:0,60,1446	0/0:16,0:16:33.11:0,33,850	0/1:30,1:31:53.23:53,0,1615	0/0:12,0:12:24.08:0,24,614	0/0:12,0:12:27.09:0,27,701
chr10	63903270	.	A	AGGGGCCACACGGGGCCTCAC	3035.60	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=2.624;DP=572;FS=9.126;HRun=0;HaplotypeScore=287.5400;InbreedingCoeff=0.9266;MQ=81.49;MQ0=0;MQRankSum=-6.490;QD=79.88;ReadPosRankSum=-1.958;VQSLOD=1.6174;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:25,6:33:36.12:2822,36,0	1/1:5,0:5:7.27:326,7,0	0/0:18,0:18:15.05:0,15,303	0/0:20,0:20:14.87:0,15,211	0/0:10,0:10:24.08:0,24,1113	0/0:20,0:20:51.18:0,51,2449	0/0:30,0:30:60.19:0,60,2619	0/0:26,0:26:33.11:0,33,1279	0/0:19,0:19:30.10:0,30,1576	0/0:32,0:32:57.17:0,57,2553	0/0:11,0:11:27.09:0,27,1334	0/0:30,0:30:66.23:0,66,2686	0/0:19,0:19:39.13:0,39,1951	0/0:22,0:22:45.14:0,45,2168	0/0:13,0:13:30.05:0,30,1317	0/0:13,0:13:24.08:0,24,1159	0/0:32,0:32:84.29:0,84,4336	0/0:32,0:32:69.24:0,69,3154	0/0:13,0:13:15.05:0,15,648	0/0:18,0:18:36.08:0,36,1719	0/0:31,0:31:51.16:0,51,1929	0/0:16,0:16:39.13:0,39,1821	0/0:19,0:19:36.12:0,36,1666	0/0:20,0:20:42.13:0,42,1718	0/0:23,0:23:48.15:0,48,2114	0/0:20,0:20:33.11:0,33,1497	0/0:17,0:17:27.09:0,27,1310	0/0:10,0:10:24.06:0,24,791
chr10	63906945	.	TCCTCCTCTC	T	17042.13	PASS	AB=0.581;AC=35;AF=0.625;AN=56;BaseQRankSum=-8.906;DP=751;FS=0.370;HRun=0;HaplotypeScore=140.0063;InbreedingCoeff=0.8990;MQ=53.49;MQ0=110;MQRankSum=1.895;QD=35.07;ReadPosRankSum=3.784;VQSLOD=4.3226;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:29:68.10:0,68,907	0/0:14,0:12:30.03:0,30,387	0/0:20,0:6:11.95:0,12,140	0/0:26,0:14:35.63:0,36,428	0/0:35,0:22:36.96:0,37,495	1/1:24,0:19:39.23:791,39,0	1/1:31,0:18:22.41:781,22,0	0/0:16,0:10:23.98:0,24,282	1/1:22,0:20:53.19:1110,53,0	1/1:12,11:15:18.31:536,18,0	0/1:7,18:23:13.73:342,0,14	1/1:34,0:27:78.26:1711,78,0	0/0:20,0:15:35.94:0,36,425	1/1:7,21:26:4.16:120,4,0	1/1:38,0:34:73.29:1664,73,0	1/1:31,0:26:43.38:1457,43,0	1/1:26,0:25:66.10:1427,66,0	1/1:21,0:18:36.11:777,36,0	1/1:12,10:11:25.24:408,25,0	1/1:20,0:18:43.37:880,43,0	1/1:47,0:34:47.74:1027,48,0	0/0:34,0:30:64.62:0,65,1162	0/0:21,0:18:39.60:0,40,534	0/0:36,0:30:69.56:0,70,1220	1/1:23,0:22:45.15:1000,45,0	1/1:13,26:31:35.37:1432,35,0	1/1:19,0:18:51.15:1070,51,0	1/1:13,0:11:24.08:508,24,0
chr10	63906954	.	C	CCCT	15702.58	PASS	AB=1.000;AC=35;AF=0.625;AN=56;BaseQRankSum=-7.230;DP=730;FS=0.000;HRun=0;HaplotypeScore=96.6720;InbreedingCoeff=0.8888;MQ=59.43;MQ0=71;MQRankSum=-0.404;QD=33.77;ReadPosRankSum=5.181;VQSLOD=5.3718;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:28:67.78:0,68,990	0/0:14,0:12:33.05:0,33,446	0/0:25,0:11:12.30:0,12,297	0/0:30,0:18:19.20:0,19,480	0/0:35,0:24:51.62:0,52,731	1/1:8,15:19:30.10:628,30,0	1/1:12,17:21:19.57:734,20,0	0/0:16,0:14:36.07:0,36,467	1/1:10,16:24:57.20:1158,57,0	1/1:20,0:15:13.08:474,13,0	0/1:23,0:22:16.63:323,0,17	1/1:6,26:28:72.25:1506,72,0	0/0:22,0:19:48.08:0,48,631	1/1:27,0:26:2.98:60,3,0	1/1:8,29:33:75.26:1571,75,0	1/1:10,18:24:29.76:1160,30,0	1/1:3,21:24:66.23:1359,66,0	1/1:4,14:17:39.13:794,39,0	1/1:17,0:11:26.95:371,27,0	1/1:6,13:18:42.14:830,42,0	1/1:19,25:34:45.15:943,45,0	0/0:30,0:28:60.19:0,60,878	0/0:20,0:19:42.14:0,42,628	0/0:36,0:30:60.19:0,60,877	1/1:6,16:25:45.15:943,45,0	1/1:33,0:30:17.75:1339,18,0	1/1:3,18:21:54.13:1069,54,0	1/1:4,9:11:21.07:440,21,0
chr10	63908831	.	C	CT	26139.04	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-16.317;DP=799;FS=1.311;HRun=0;HaplotypeScore=74.0280;InbreedingCoeff=0.9944;MQ=85.75;MQ0=0;MQRankSum=-6.023;QD=44.38;ReadPosRankSum=5.088;VQSLOD=4.9959;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,55:55:99:2446,154,0	1/1:0,12:12:30.10:480,30,0	0/0:22,0:22:54.13:0,54,694	0/0:30,0:30:75.99:0,76,1078	0/0:26,0:26:78.24:0,78,1073	1/1:0,18:18:54.18:863,54,0	1/1:1,31:32:87.30:1391,87,0	0/0:34,0:34:96.30:0,96,1298	1/1:0,27:27:75.26:1199,75,0	1/1:1,24:25:75.21:1164,75,0	1/1:1,12:13:24.08:384,24,0	1/1:1,32:33:96.28:1507,96,0	0/0:30,0:30:90.29:0,90,1234	1/1:1,34:35:96.33:1535,96,0	1/1:0,38:38:99:1583,99,0	1/1:2,26:28:75.21:1171,75,0	1/1:0,34:34:99:1583,99,0	1/1:0,35:35:99:1679,105,0	1/1:0,27:27:81.28:1295,81,0	1/1:0,31:31:84.29:1341,84,0	1/1:0,55:55:99:2542,160,0	0/0:19,0:19:51.17:0,51,712	0/0:21,0:21:63.20:0,63,864	0/0:28,0:28:75.25:0,75,1047	1/1:1,19:20:57.19:911,57,0	1/1:2,32:34:96.28:1484,96,0	1/1:0,32:32:87.30:1391,87,0	1/1:0,5:5:12.04:192,12,0
chr10	63909219	.	ATGTG	A	3114.47	PASS	AB=0.985;AC=37;AF=0.685;AN=54;BaseQRankSum=-3.414;DP=497;FS=2.161;HRun=0;HaplotypeScore=92.1602;InbreedingCoeff=0.4519;MQ=56.73;MQ0=13;MQRankSum=0.870;QD=9.30;ReadPosRankSum=5.547;VQSLOD=2.0354;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:23:2.98:0,3,21	0/0:5,0:5:6.91:0,7,134	./.	0/0:18,0:13:0.89:0,1,2	1/1:19,0:19:10.79:174,11,0	1/1:19,0:18:12.45:352,12,0	1/1:30,0:27:0.70:121,1,0	1/1:13,0:13:0.47:1,0,0	1/1:16,0:13:14.16:180,14,0	1/1:7,4:11:12.01:127,12,0	1/1:6,0:6:2.96:19,3,0	1/1:14,0:14:11.79:179,12,0	0/0:18,0:18:14.20:0,14,250	1/1:15,0:14:14.03:211,14,0	1/1:28,0:26:1.90:228,2,0	0/1:17,0:15:37.04:150,0,37	0/1:20,0:21:66.46:285,0,66	1/1:21,0:18:8.85:301,9,0	1/1:20,0:20:5.88:94,6,0	1/1:11,0:11:7.97:97,8,0	1/1:12,0:11:1.55:4,2,0	0/0:17,0:16:8.10:0,8,251	0/0:17,0:17:24.02:0,24,326	0/0:38,0:37:57.55:0,58,937	1/1:18,0:18:15.93:217,16,0	0/1:21,0:20:29.53:109,0,30	1/1:14,0:13:18.31:300,18,0	1/1:9,0:8:8.72:135,9,0
chr10	63909962	.	TC	T	14302.23	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=4.935;DP=760;FS=0.000;HRun=8;HaplotypeScore=79.9171;InbreedingCoeff=0.9995;MQ=88.38;MQ0=0;MQRankSum=-3.980;QD=24.74;ReadPosRankSum=4.424;VQSLOD=5.3216;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,40:46:99:1141,121,0	1/1:1,17:18:48.08:464,48,0	0/0:29,0:28:57.15:0,57,661	0/0:28,0:29:59.54:0,60,674	1/1:2,23:25:63.09:608,63,0	1/1:2,13:15:36.06:348,36,0	1/1:7,20:27:51.08:493,51,0	1/1:6,17:23:48.07:463,48,0	1/1:2,30:32:84.13:811,84,0	1/1:5,24:29:75.11:723,75,0	1/1:1,15:16:39.06:376,39,0	1/1:3,25:28:75.12:724,75,0	0/0:24,0:24:69.19:0,69,813	1/1:1,23:24:63.10:608,63,0	1/1:1,38:39:96.15:927,96,0	1/1:1,28:29:84.13:811,84,0	1/1:0,31:31:87.14:840,87,0	1/1:1,22:23:32.88:601,33,0	1/1:4,23:27:69.06:652,69,0	1/1:1,18:19:51.08:492,51,0	1/1:3,50:53:99:1424,149,0	0/0:35,0:35:99:0,102,1199	0/0:26,0:26:78.21:0,78,927	0/0:39,0:39:99:0,102,1232	1/1:4,14:18:36.05:348,36,0	1/1:1,23:24:69.11:666,69,0	1/1:4,19:23:57.09:550,57,0	1/1:0,9:9:24.04:232,24,0
chr10	63910604	.	G	GA	5986.97	PASS	AB=0.614;AC=34;AF=0.607;AN=56;BaseQRankSum=-9.560;DP=525;FS=0.415;HRun=11;HaplotypeScore=59.1431;InbreedingCoeff=0.7017;MQ=70.37;MQ0=5;MQRankSum=-0.460;QD=17.11;ReadPosRankSum=2.702;VQSLOD=5.7165;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:2,0:28:44.58:0,45,129	0/0:0,0:6:10.18:0,10,29	0/0:22,0:11:16.30:0,16,106	0/0:30,0:19:29.11:0,29,195	1/1:4,24:28:30.34:461,30,0	0/1:5,18:23:33.63:238,0,34	1/1:2,7:9:12.91:124,13,0	0/0:29,1:31:55.69:0,56,420	1/1:7,9:18:23.56:377,24,0	1/1:6,8:14:7.47:197,7,0	1/1:3,14:18:31.24:305,31,0	0/1:4,10:14:5.20:134,0,5	0/0:13,0:13:32.87:0,33,255	1/1:0,20:20:42.08:426,42,0	1/1:5,11:16:21.81:388,22,0	1/1:2,12:14:23.86:243,24,0	1/1:1,16:18:29.22:329,29,0	1/1:6,21:26:21.85:403,22,0	0/1:7,11:18:24.52:320,0,25	1/1:1,14:15:12.83:312,13,0	0/1:5,4:9:5.85:110,0,6	0/0:11,0:11:20.90:0,21,162	0/0:8,1:10:22.96:0,23,168	0/0:19,3:22:44.54:0,45,348	1/1:3,23:27:50.94:502,51,0	1/1:6,12:18:35.91:349,36,0	1/1:6,24:29:38.41:557,38,0	1/1:2,12:14:21.04:213,21,0
chr10	63911524	.	CGT	C	294.52	PASS	AB=0.918;AC=15;AF=0.288;AN=52;BaseQRankSum=4.997;DP=761;FS=10.988;HRun=0;HaplotypeScore=102.2773;InbreedingCoeff=-0.4187;MQ=59.11;MQ0=14;MQRankSum=0.339;QD=0.72;ReadPosRankSum=1.682;VQSLOD=1.3399;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:32:9.01:0,9,105	0/0:13,0:11:1.55:0,2,4	./.	./.	0/0:22,0:25:2.28:0,2,15	0/1:20,3:23:41:41,0,219	0/1:27,1:29:16.55:17,0,302	0/0:31,0:29:17.92:0,18,152	0/0:32,0:32:39.13:0,39,554	0/1:26,0:26:21.12:21,0,80	0/0:17,0:17:15.05:0,15,223	0/0:26,4:31:3.59:0,4,434	0/1:15,3:18:70.47:70,0,215	0/1:36,3:39:44.99:45,0,546	0/1:30,4:34:7.88:8,0,632	0/0:31,1:32:3.58:0,4,456	0/1:23,0:25:4.50:5,0,473	0/0:29,2:31:14.54:0,15,547	0/1:25,2:27:23.48:23,0,77	0/1:22,0:22:28.93:29,0,376	0/1:49,1:50:7.04:7,0,317	0/1:15,2:17:5.44:5,0,325	0/0:14,1:14:6:0,6,68	0/1:41,2:43:14.04:14,0,565	0/1:22,1:24:12.37:12,0,193	0/0:22,0:21:12.93:0,13,179	0/1:13,6:21:26.77:109,0,27	0/1:6,1:5:26.51:27,0,39
chr10	63912372	.	CG	C	1851.61	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.597;DP=622;FS=4.393;HRun=1;HaplotypeScore=63.6784;InbreedingCoeff=0.9659;MQ=86.04;MQ0=0;MQRankSum=-4.761;QD=34.29;ReadPosRankSum=1.730;VQSLOD=3.4860;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,48:48:99:1720,123,0	1/1:0,6:6:18.06:252,18,0	0/0:21,0:21:60.18:0,60,917	0/0:20,0:20:54.07:0,54,771	0/0:20,0:20:60.19:0,60,934	0/0:20,0:20:57.18:0,57,886	0/0:29,0:29:87.30:0,87,1376	0/0:22,0:22:66.18:0,66,1025	0/0:13,0:13:39.12:0,39,600	0/0:20,0:20:58.07:0,58,892	0/0:10,0:10:27.09:0,27,431	0/0:31,0:31:93.29:0,93,1430	0/0:18,0:18:54.14:0,54,829	0/0:18,0:18:54.17:0,54,839	0/0:18,0:18:54.18:0,54,862	0/0:21,0:21:63.21:0,63,1002	0/0:45,0:45:99:0,132,2055	0/0:21,0:21:63.19:0,63,980	0/0:27,0:27:75.24:0,75,1155	0/0:13,0:13:35.86:0,36,539	0/0:52,0:52:99:0,153,2404	0/0:18,0:18:54.18:0,54,858	0/0:15,0:15:33.07:0,33,488	0/0:24,0:24:72.23:0,72,1125	0/0:31,0:31:87.30:0,87,1384	0/0:22,0:22:63.21:0,63,1006	0/0:16,0:16:48.16:0,48,763	0/0:3,0:3:9.03:0,9,139
chr10	63912864	.	GGGTGCCT	G	2083.26	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.502;DP=630;FS=0.000;HRun=0;HaplotypeScore=145.8855;InbreedingCoeff=0.9950;MQ=81.90;MQ0=0;MQRankSum=-8.978;QD=33.07;ReadPosRankSum=-0.842;VQSLOD=3.2929;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:12,18:30:48.16:1119,48,0	1/1:4,8:12:21.07:491,21,0	0/0:18,0:18:27.04:0,27,656	0/0:21,0:22:29.26:0,29,605	1/1:8,13:21:30.06:615,30,0	0/0:16,0:16:39.13:0,39,1458	0/0:24,0:24:45.15:0,45,1588	0/0:15,0:15:21.07:0,21,761	0/0:15,0:15:33.11:0,33,1216	0/0:17,0:17:42.14:0,42,1508	0/0:11,0:11:24.07:0,24,807	0/0:29,0:29:60.20:0,60,2157	0/0:25,0:25:57.20:0,57,2020	0/0:29,0:29:72.24:0,72,2585	0/0:19,0:19:48.16:0,48,1714	0/0:22,0:22:48.16:0,48,1792	0/0:32,0:32:69.24:0,69,2567	0/0:28,0:28:63.22:0,63,2254	0/0:21,0:21:33.11:0,33,1148	0/0:16,0:16:33.11:0,33,1099	0/0:71,0:71:99:0,172,6116	0/0:23,0:23:54.19:0,54,1918	0/0:14,0:14:39.13:0,39,1404	0/0:28,0:28:66.23:0,66,2446	0/0:28,0:28:63.22:0,63,2319	0/0:16,0:16:36.12:0,36,1321	0/0:14,0:13:30.10:0,30,1096	0/0:14,0:14:42.14:0,42,1564
chr10	63914160	.	GAGTATTGCAC	G	2808.94	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.181;DP=802;FS=11.853;HRun=0;HaplotypeScore=230.3277;InbreedingCoeff=0.9987;MQ=87.92;MQ0=0;MQRankSum=-9.331;QD=55.08;ReadPosRankSum=0.587;VQSLOD=2.0776;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,31:38:63.17:1967,63,0	1/1:0,13:13:30.10:964,30,0	0/0:32,0:32:87.30:0,87,3890	0/0:26,0:26:65.86:0,66,2657	0/0:27,0:27:81.25:0,81,4024	0/0:17,0:17:45.15:0,45,2273	0/0:35,0:35:99:0,105,5267	0/0:36,0:36:99:0,102,4824	0/0:21,0:21:63.22:0,63,3163	0/0:36,0:36:99:0,102,5248	0/0:23,0:23:66.23:0,66,3432	0/0:25,0:25:69.24:0,69,3559	0/0:22,0:22:60.21:0,60,3094	0/0:29,0:29:84.29:0,84,4219	0/0:37,0:37:99:0,111,5800	0/0:34,0:34:96.30:0,96,4802	0/0:39,0:39:99:0,117,5859	0/0:32,0:31:96.21:0,96,4550	0/0:18,0:18:51.15:0,51,2270	0/0:20,0:20:57.18:0,57,2687	0/0:74,0:74:99:0,211,10722	0/0:25,0:25:69.24:0,69,3419	0/0:18,0:18:54.17:0,54,2578	0/0:32,0:32:96.31:0,96,4667	0/0:20,0:20:60.18:0,60,2649	0/0:31,0:31:84.29:0,84,4290	0/0:34,0:34:99:0,102,5304	0/0:8,0:8:24.08:0,24,1272
chr10	63915186	.	CG	C	517.34	PASS	AC=2;AF=0.040;AN=50;BaseQRankSum=1.551;DP=335;FS=13.653;HRun=2;HaplotypeScore=46.5633;InbreedingCoeff=0.5895;MQ=82.98;MQ0=1;MQRankSum=-0.052;QD=25.87;ReadPosRankSum=-2.063;VQSLOD=1.5741;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:16,4:20:51.11:611,51,0	./.	0/0:25,1:25:30.10:0,30,798	0/0:16,0:13:17.42:0,17,334	0/0:6,0:6:6.02:0,6,72	0/0:10,0:10:21.07:0,21,295	0/0:29,0:29:72.95:0,73,1006	0/0:11,0:11:33.10:0,33,470	0/0:9,0:9:27.07:0,27,378	0/0:4,0:5:12.03:0,12,176	0/0:3,0:3:0.12:0,0,79	0/0:17,0:17:33.11:0,33,446	0/0:15,0:15:42.12:0,42,581	0/0:12,0:12:36.11:0,36,500	0/0:17,0:17:45.14:0,45,642	0/0:16,0:16:39.10:0,39,538	0/0:28,0:28:69.08:0,69,956	0/0:14,0:14:39.13:0,39,561	0/0:11,0:11:27.69:0,28,333	./.	0/0:16,0:16:42.12:0,42,586	0/0:5,0:5:7.67:0,8,56	0/0:4,0:4:9.02:0,9,113	0/0:16,0:16:42.14:0,42,609	0/0:3,0:3:6.02:0,6,88	0/0:11,0:11:24.07:0,24,327	0/0:14,0:14:39.12:0,39,529	./.
chr10	63915808	.	AG	A	1031.40	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.759;DP=608;FS=23.804;HRun=3;HaplotypeScore=64.4205;InbreedingCoeff=0.9940;MQ=86.81;MQ0=0;MQRankSum=-5.782;QD=25.16;ReadPosRankSum=2.172;VQSLOD=2.0378;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,32:32:72.23:892,72,0	1/1:0,9:9:21.07:260,21,0	0/0:17,0:17:48.03:0,48,598	0/0:29,0:29:75.16:0,75,919	0/0:17,0:17:51.06:0,51,687	0/0:25,0:25:75.24:0,75,1059	0/0:28,0:28:78.25:0,78,1105	0/0:34,0:34:99:0,99,1329	0/0:34,0:34:99:0,102,1428	0/0:17,0:17:48.15:0,48,676	0/0:7,0:7:21.07:0,21,301	0/0:30,0:30:87.29:0,87,1251	0/0:18,0:18:54.16:0,54,741	0/0:33,0:33:99:0,99,1370	0/0:29,0:29:87.29:0,87,1251	0/0:25,0:25:75.22:0,75,1040	0/0:31,0:31:87.27:0,87,1218	0/0:15,0:15:42.14:0,42,603	0/0:13,0:13:39.13:0,39,553	0/0:12,0:12:33.11:0,33,474	0/0:35,0:35:99:0,102,1466	0/0:15,0:15:45.15:0,45,647	0/0:9,0:9:24.08:0,24,343	0/0:28,0:28:81.26:0,81,1147	0/0:10,0:10:27.09:0,27,388	0/0:15,0:15:45.14:0,45,630	0/0:29,0:29:84.25:0,84,1158	0/0:12,0:12:36.09:0,36,482
chr10	63917160	.	TTTC	T	106.97	PASS	AB=0.963;AC=13;AF=0.232;AN=56;BaseQRankSum=0.679;DP=324;FS=1.170;HRun=0;HaplotypeScore=55.7546;InbreedingCoeff=-0.1762;MQ=52.58;MQ0=11;MQRankSum=0.260;QD=0.76;ReadPosRankSum=-5.621;VQSLOD=-0.3732;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:10.65:0,11,156	0/0:2,0:2:6.01:0,6,85	0/1:28,0:8:0.36:0,0,49	0/0:32,1:10:19.47:0,19,172	0/0:9,0:9:0.89:0,1,170	0/0:8,0:8:14.04:0,14,92	0/1:12,1:12:45.07:47,0,45	0/0:17,1:18:26.01:0,26,421	0/1:11,1:11:18.12:18,0,139	0/1:18,0:18:19.20:19,0,375	0/0:9,0:9:11.14:0,11,64	0/0:12,0:12:13.92:0,14,111	0/0:3,0:3:3.50:0,3,61	0/0:10,0:10:0.30:0,0,92	0/1:5,1:6:8.45:8,0,104	0/0:13,0:11:26.34:0,26,252	0/1:14,0:12:12.23:12,0,80	0/0:12,0:11:5.72:0,6,79	0/1:10,0:9:20.28:20,0,189	0/1:9,0:9:23.85:24,0,133	1/1:5,0:5:5.02:20,5,0	0/0:4,0:4:12:0,12,108	0/1:5,0:5:25.65:33,0,26	0/0:16,0:16:23.13:0,23,368	0/0:7,0:6:16.16:0,16,163	0/0:12,0:12:8.67:0,9,160	0/1:12,0:12:0.29:0,0,104	0/1:7,1:6:41.21:41,0,47
chr10	63917452	.	TAAAGA	T	37.91	PASS	AB=0.875;AC=3;AF=0.125;AN=24;BaseQRankSum=0.542;DP=146;FS=11.621;HRun=0;HaplotypeScore=19.1781;InbreedingCoeff=0.0429;MQ=24.91;MQ0=75;MQRankSum=2.805;QD=2.37;ReadPosRankSum=-1.956;VQSLOD=-0.5758;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:2:3.01:0,3,82	./.	0/0:5,0:2:2.60:0,3,10	0/0:8,0:3:3.01:0,3,36	0/1:4,6:10:99:106,0,204	./.	./.	0/0:33,0:19:50.95:0,51,1367	./.	./.	./.	./.	0/0:4,0:4:2.52:0,3,81	./.	./.	0/0:3,0:2:3.01:0,3,82	0/0:7,0:4:2.80:0,3,13	0/0:8,0:2:3.01:0,3,82	./.	./.	./.	0/1:1,0:1:0:0,0,0	0/0:3,0:3:9.03:0,9,205	0/1:5,0:2:0:0,0,0	./.	./.	./.	./.
chr10	63918773	.	ATT	A	7428.86	PASS	AB=0.780;AC=40;AF=0.714;AN=56;BaseQRankSum=7.224;DP=675;FS=9.726;HRun=14;HaplotypeScore=90.9009;InbreedingCoeff=0.7910;MQ=69.72;MQ0=2;MQRankSum=1.053;QD=15.22;ReadPosRankSum=5.962;VQSLOD=3.2559;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:7,25:33:32.26:458,0,32	1/1:3,4:8:2.83:75,3,0	0/0:24,0:19:7.39:0,7,136	0/1:10,0:8:4.38:4,0,18	0/0:27,0:28:67.43:0,67,790	1/1:8,25:34:17.58:469,18,0	1/1:5,11:16:29.98:278,30,0	0/0:32,0:32:57.09:0,57,710	1/1:5,15:21:29.81:323,30,0	1/1:8,17:26:41.70:431,42,0	1/1:4,23:30:56.24:495,56,0	1/1:7,11:18:26.90:250,27,0	0/0:20,0:21:53.59:0,54,666	1/1:7,12:20:38.47:343,38,0	1/1:5,23:28:59.97:555,60,0	1/1:5,25:32:61.78:535,62,0	1/1:5,28:34:61.98:598,62,0	1/1:6,16:22:46.70:442,47,0	1/1:10,6:17:17.62:150,18,0	1/1:5,19:27:35.34:411,35,0	1/1:4,14:22:11.30:236,11,0	0/0:30,1:34:43.80:0,44,824	0/0:20,0:23:59.65:0,60,759	0/0:22,0:23:62.64:0,63,777	1/1:4,19:23:44.98:416,45,0	1/1:10,20:34:41.24:513,41,0	1/1:5,14:20:35.71:317,36,0	1/1:2,9:12:8.79:130,9,0
chr10	63922854	.	TG	T	645.44	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.386;DP=752;FS=9.716;HRun=6;HaplotypeScore=70.9981;InbreedingCoeff=0.9967;MQ=85.97;MQ0=0;MQRankSum=-0.171;QD=23.91;ReadPosRankSum=-3.671;VQSLOD=1.5550;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:63,0:63:99:0,172,2201	0/0:15,0:15:41.70:0,42,504	0/0:27,0:27:72.20:0,72,904	0/0:24,0:24:50.64:0,51,694	0/0:18,0:18:39.11:0,39,486	0/0:13,0:13:39.12:0,39,500	0/0:32,0:32:90.27:0,90,1155	1/1:4,23:27:69.17:740,69,0	0/0:32,1:33:61.06:0,61,1152	0/0:18,0:18:42.14:0,42,551	0/0:17,0:17:51.14:0,51,638	0/0:31,0:31:87.28:0,87,1140	0/0:26,0:26:72.23:0,72,946	0/0:35,0:35:95.90:0,96,1188	0/0:31,0:31:90.28:0,90,1170	0/0:36,0:36:96.30:0,96,1248	0/0:33,0:33:99:0,99,1270	0/0:28,0:28:81.26:0,81,1066	0/0:20,0:20:42.14:0,42,551	0/0:10,0:10:24.06:0,24,301	0/0:55,0:54:99:0,150,1926	0/0:20,0:20:54.13:0,54,665	0/0:15,0:15:45.12:0,45,561	0/0:46,0:46:99:0,132,1707	0/0:19,0:19:48.15:0,48,622	0/0:21,0:21:51.15:0,51,644	0/0:30,0:30:81.26:0,81,1064	0/0:9,0:9:27.07:0,27,339
chr10	63924664	.	TGGGACTCAGGTCCA	T	2446.66	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.423;DP=621;FS=19.667;HRun=0;HaplotypeScore=233.2603;InbreedingCoeff=0.9911;MQ=79.05;MQ0=0;MQRankSum=-7.559;QD=69.90;ReadPosRankSum=-0.219;VQSLOD=1.7539;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,19:27:45.15:1920,45,0	1/1:2,6:8:15.05:645,15,0	0/0:22,0:22:63.22:0,63,3268	0/0:22,0:23:63.68:0,64,3610	0/0:26,0:26:78.27:0,78,5182	0/0:25,0:25:75.26:0,75,4918	0/0:22,0:22:66.23:0,66,4493	0/0:40,0:39:99:0,117,7099	0/0:23,0:23:69.24:0,69,4451	0/0:14,0:14:39.13:0,39,2289	0/0:14,0:13:36.12:0,36,2467	0/0:22,0:22:66.18:0,66,4250	0/0:20,0:20:60.21:0,60,3850	0/0:17,0:17:51.18:0,51,3283	0/0:23,0:23:66.22:0,66,4363	0/0:27,0:27:81.27:0,81,4958	0/0:18,0:18:54.17:0,54,3428	0/0:21,0:21:63.22:0,63,4301	0/0:17,0:17:51.16:0,51,3440	0/0:21,0:21:63.19:0,63,3946	0/0:41,0:41:99:0,120,7322	0/0:21,0:21:57.18:0,57,3690	0/0:22,0:22:63.22:0,63,4267	0/0:29,0:29:87.30:0,87,5935	0/0:28,0:28:81.28:0,81,5376	0/0:16,0:16:45.15:0,45,2697	0/0:25,0:25:75.24:0,75,5009	0/0:9,0:9:27.09:0,27,1564
chr10	63926682	.	A	ATTT	5093.61	PASS	AB=0.798;AC=41;AF=0.732;AN=56;BaseQRankSum=1.351;DP=593;FS=0.000;HRun=15;HaplotypeScore=118.3723;InbreedingCoeff=0.4558;MQ=74.48;MQ0=1;MQRankSum=-3.583;QD=10.46;ReadPosRankSum=-2.811;VQSLOD=1.4946;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:14,0:40:47.21:47,0,127	1/1:2,0:6:6.73:31,7,0	0/1:23,0:19:12.74:13,0,125	0/1:18,0:13:10.76:27,0,11	1/1:18,1:23:25.12:323,25,0	0/1:7,1:15:14.49:103,0,14	1/1:10,5:19:21.11:223,21,0	0/0:25,0:30:36.05:0,36,342	0/1:9,5:15:8.44:225,0,8	1/1:8,7:18:27.01:360,27,0	1/1:5,0:11:18.28:172,18,0	1/1:11,0:23:4.54:27,5,0	0/0:18,0:19:10.45:0,10,91	1/1:22,0:22:18.06:265,18,0	1/1:10,14:31:23.29:330,23,0	1/1:12,16:35:3.85:323,4,0	1/1:9,1:24:22.49:202,22,0	1/1:5,10:21:12.58:122,13,0	1/1:15,3:20:10.52:211,11,0	1/1:7,2:19:30:376,30,0	1/1:10,7:19:22.09:272,22,0	0/0:16,0:18:38.60:0,39,371	0/0:19,0:20:15.66:0,16,286	0/0:15,0:19:24.77:0,25,246	1/1:5,10:20:0.05:297,0,0	1/1:7,12:22:41.99:510,42,0	1/1:15,12:33:21.07:307,21,0	1/1:1,3:10:29.99:328,30,0
chr10	63927393	.	AGG	A	919.22	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.547;DP=470;FS=7.000;HRun=10;HaplotypeScore=72.0826;InbreedingCoeff=0.7583;MQ=81.60;MQ0=1;MQRankSum=0.379;QD=20.43;ReadPosRankSum=2.441;VQSLOD=2.6430;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,28:39:84.22:932,84,0	1/1:0,6:6:9.02:101,9,0	0/0:25,0:20:25.74:0,26,373	0/0:23,0:22:3.54:0,4,336	0/0:2,0:8:5.97:0,6,49	0/0:15,0:15:17.99:0,18,241	0/0:19,0:21:52.39:0,52,696	0/0:30,0:30:53.05:0,53,614	0/0:0,0:3:3:0,3,29	0/0:11,0:12:23.05:0,23,278	0/0:10,0:11:26.55:0,27,317	0/0:20,0:20:48.10:0,48,682	0/0:16,0:17:42.01:0,42,532	0/0:14,0:14:36.07:0,36,456	0/0:15,0:17:40.58:0,41,503	0/0:16,0:17:41.60:0,42,567	0/0:23,0:23:48.15:0,48,735	0/0:24,0:26:65.63:0,66,899	0/0:18,0:18:29.12:0,29,398	0/0:9,0:9:18.89:0,19,241	0/0:24,0:25:57.02:0,57,782	0/0:9,0:11:16.72:0,17,266	0/0:10,0:11:27.01:0,27,342	0/0:27,0:27:60.16:0,60,858	0/0:7,0:7:17.53:0,18,199	0/0:9,0:11:17.03:0,17,203	0/0:13,0:13:25.62:0,26,363	0/0:8,0:8:18.06:0,18,286
chr10	63928282	.	AG	A	1544.55	PASS	AB=0.957;AC=19;AF=0.339;AN=56;BaseQRankSum=4.542;DP=569;FS=135.705;HRun=1;HaplotypeScore=83.5981;InbreedingCoeff=0.0628;MQ=58.82;MQ0=0;MQRankSum=-2.801;QD=4.90;ReadPosRankSum=-5.041;VQSLOD=0.1380;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:31,0:31:14.27:88,14,0	1/1:9,0:9:16.86:134,17,0	0/0:18,2:15:9.85:0,10,300	0/0:8,0:5:8.13:0,8,95	1/1:22,0:21:49.99:328,50,0	0/0:26,0:26:4.82:0,5,46	0/1:27,0:27:99:156,0,232	1/1:38,0:33:44.15:285,44,0	0/1:25,0:25:99:109,0,301	0/1:26,0:25:62.02:62,0,198	0/1:18,0:17:30.65:31,0,170	0/1:18,0:18:99:132,0,136	0/0:23,0:23:60.95:0,61,692	0/0:12,0:12:0.49:0,0,50	0/0:24,0:24:17.98:0,18,149	0/0:18,0:18:17.82:0,18,137	0/1:18,0:17:58.25:58,0,70	0/1:15,0:14:7.50:8,0,241	0/1:18,0:18:87.32:87,0,223	0/0:23,0:23:23.60:0,24,310	0/1:10,1:10:28.25:28,0,61	0/0:18,0:18:32.35:0,32,498	0/0:7,0:7:10.19:0,10,178	0/0:34,0:34:85.90:0,86,977	0/1:16,1:17:61.73:62,0,186	0/1:11,11:21:99:156,0,186	0/0:26,0:26:16.99:0,17,123	0/0:15,0:15:14.54:0,15,93
chr10	63929942	.	T	TAAA	3481	PASS	AB=0.717;AC=41;AF=0.759;AN=54;BaseQRankSum=2.053;DP=410;FS=7.213;HRun=15;HaplotypeScore=70.8087;InbreedingCoeff=0.4504;MQ=44.11;MQ0=13;MQRankSum=-2.145;QD=9.31;ReadPosRankSum=-0.809;VQSLOD=-0.2001;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:24:4.35:12,4,0	1/1:2,0:7:4.98:11,5,0	./.	0/1:2,0:1:0:0,0,0	0/1:7,0:19:14.38:27,0,14	1/1:7,13:21:27.03:366,27,0	1/1:5,1:7:3.01:51,3,0	0/1:23,0:36:24.71:25,0,69	1/1:5,2:6:6.02:73,6,0	0/1:12,1:19:11.46:157,0,11	1/1:9,6:20:33.48:381,33,0	1/1:5,3:8:11.98:133,12,0	0/0:7,0:6:8.79:0,9,88	1/1:7,0:7:3.01:40,3,0	0/1:7,0:10:0:1,0,0	1/1:8,6:15:15.03:226,15,0	1/1:12,12:24:18.04:258,18,0	1/1:13,10:23:15.03:227,15,0	1/1:12,1:14:13.21:128,13,0	1/1:0,4:5:9.01:124,9,0	1/1:3,2:6:4.73:56,5,0	0/0:6,0:6:7.82:0,8,65	0/0:4,0:5:11.78:0,12,99	0/0:15,0:14:29.64:0,30,284	1/1:18,8:25:25.32:368,25,0	1/1:14,6:21:33.05:449,33,0	1/1:7,1:13:12.75:119,13,0	1/1:16,7:21:15.05:247,15,0
chr10	63931174	.	GA	G	56.32	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.900;DP=603;FS=8.350;HRun=14;HaplotypeScore=69.1679;InbreedingCoeff=0.7444;MQ=58.90;MQ0=5;MQRankSum=1.623;QD=3.13;ReadPosRankSum=0.929;VQSLOD=-0.2739;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:44,6:52:37.63:0,38,707	0/0:6,0:6:9.01:0,9,84	0/0:12,2:8:17.56:0,18,146	0/0:15,1:11:15.87:0,16,137	1/1:5,12:17:22.81:149,23,0	0/0:13,0:13:35.19:0,35,287	0/0:18,0:21:48.43:0,48,413	0/0:31,1:31:39.24:0,39,467	0/0:16,1:17:7.24:0,7,172	0/0:23,0:23:42.60:0,43,347	0/0:12,0:12:24.44:0,24,212	0/0:18,1:19:18.32:0,18,249	0/0:18,0:18:13.32:0,13,157	0/0:24,1:25:43.25:0,43,377	0/0:26,0:26:48.22:0,48,429	0/0:21,1:24:42.15:0,42,506	0/0:30,1:32:38.98:0,39,475	0/0:25,0:25:44.37:0,44,457	0/0:17,0:15:32.49:0,32,290	0/0:23,0:23:21.76:0,22,337	0/0:25,0:26:45.08:0,45,366	0/0:17,0:16:24.03:0,24,223	0/0:16,1:17:6.48:0,6,198	0/0:38,0:36:54.41:0,54,759	0/0:14,0:14:16.25:0,16,138	0/0:19,1:20:21.10:0,21,308	0/0:23,1:24:27.17:0,27,355	0/0:10,0:11:14.81:0,15,114
chr10	63933174	.	A	AC	15156.10	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=7.076;DP=659;FS=5.269;HRun=0;HaplotypeScore=102.9778;InbreedingCoeff=0.9973;MQ=85.74;MQ0=0;MQRankSum=-4.424;QD=33.61;ReadPosRankSum=2.722;VQSLOD=4.3480;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:64.62:0,65,576	0/0:6,0:6:17.79:0,18,121	0/0:24,0:23:60.09:0,60,753	0/0:34,0:34:53.70:0,54,986	0/0:16,0:16:47.55:0,48,341	1/1:1,16:17:45.12:600,45,0	1/1:2,30:32:75.87:1038,76,0	1/1:2,32:34:89.83:1232,90,0	1/1:1,25:26:69.20:876,69,0	1/1:0,15:15:45.14:620,45,0	1/1:2,7:9:18.94:240,19,0	1/1:2,28:30:85.52:1120,86,0	0/0:22,0:22:66.22:0,66,915	1/1:1,22:23:56.33:808,56,0	1/1:3,26:29:73.47:964,73,0	1/1:0,22:22:60.19:803,60,0	1/1:1,31:32:75.23:999,75,0	1/1:1,26:27:75.23:942,75,0	1/1:1,22:23:61.54:824,62,0	1/1:3,17:20:25.80:405,26,0	1/1:2,27:29:72.10:976,72,0	0/0:21,0:21:60.20:0,60,838	0/0:15,0:15:45.15:0,45,629	0/0:37,0:37:99:0,111,1550	1/1:0,19:19:48.16:639,48,0	1/1:0,23:23:66.19:863,66,0	1/1:2,26:28:59.24:821,59,0	1/1:1,12:13:30.08:387,30,0
chr10	63933920	.	GAA	G	11213.92	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=1.785;DP=632;FS=9.708;HRun=11;HaplotypeScore=86.0993;InbreedingCoeff=0.9960;MQ=75.17;MQ0=2;MQRankSum=-1.241;QD=25.90;ReadPosRankSum=3.104;VQSLOD=4.2439;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:36:57.91:0,58,220	0/0:0,0:9:17.97:0,18,62	0/0:23,0:18:27.09:0,27,389	0/0:15,0:13:15.35:0,15,170	0/0:18,0:21:38.46:0,38,517	1/1:6,17:23:48.08:511,48,0	1/1:2,27:29:69.17:734,69,0	1/1:6,23:29:65.95:676,66,0	1/1:5,17:22:51.09:543,51,0	1/1:4,26:30:81.18:860,81,0	1/1:1,18:19:45.07:479,45,0	1/1:1,21:22:54.02:575,54,0	0/0:23,0:25:68.58:0,69,986	1/1:3,22:25:48.09:511,48,0	1/1:2,15:17:39.09:415,39,0	1/1:1,17:18:29.77:518,30,0	1/1:1,27:28:75.18:798,75,0	1/1:2,25:27:66.16:702,66,0	1/1:4,10:15:32.76:331,33,0	1/1:0,21:22:50.80:523,51,0	1/1:0,24:24:66.17:702,66,0	0/0:26,0:26:74.47:0,74,1080	0/0:28,0:28:66.12:0,66,981	0/0:16,0:16:39.13:0,39,600	1/1:2,16:18:39.09:415,39,0	1/1:4,23:27:72.08:739,72,0	1/1:1,23:24:69.17:734,69,0	1/1:0,14:14:42.11:447,42,0
chr10	63934400	.	A	ATTT	4438.88	PASS	AB=0.749;AC=39;AF=0.696;AN=56;BaseQRankSum=2.044;DP=619;FS=6.464;HRun=14;HaplotypeScore=94.8585;InbreedingCoeff=0.6170;MQ=74.04;MQ0=1;MQRankSum=-0.625;QD=10.09;ReadPosRankSum=-1.891;VQSLOD=1.7304;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:12,3:40:45.29:417,45,0	1/1:1,1:6:11.98:120,12,0	0/0:20,0:16:2.39:0,2,52	0/1:13,0:13:15.75:21,0,16	0/0:30,0:31:50.02:0,50,502	1/1:6,0:21:26.98:283,27,0	1/1:7,0:18:19.20:170,19,0	0/0:34,0:35:44.33:0,44,449	1/1:6,0:17:7.25:66,7,0	1/1:11,1:30:23.11:372,23,0	1/1:3,1:19:35.90:346,36,0	1/1:3,0:10:4.23:25,4,0	0/0:17,0:19:10.93:0,11,101	1/1:3,0:9:2.99:23,3,0	1/1:5,0:23:11.55:87,12,0	1/1:10,0:31:0.26:310,0,0	0/1:7,0:25:6.85:167,0,7	1/1:8,0:23:13.10:161,13,0	0/1:13,0:26:10.98:335,0,11	1/1:6,1:27:58.34:491,58,0	1/1:6,1:18:20.09:171,20,0	0/0:22,0:24:34.06:0,34,346	0/0:23,0:26:40.33:0,40,422	0/0:23,0:23:26.03:0,26,265	1/1:4,0:17:19.99:174,20,0	1/1:9,0:25:47.77:400,48,0	1/1:6,0:22:16.95:116,17,0	1/1:4,0:18:26.37:183,26,0
chr10	63935536	.	G	GA	492.99	PASS	AB=0.975;AC=3;AF=0.054;AN=56;BaseQRankSum=0.666;DP=567;FS=2.992;HRun=8;HaplotypeScore=66.8892;InbreedingCoeff=0.7296;MQ=74.67;MQ0=3;MQRankSum=0.022;QD=8.50;ReadPosRankSum=-1.470;VQSLOD=1.1620;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:69.02:0,69,628	0/0:8,0:8:12:0,12,110	0/1:37,0:15:1.06:1,0,94	0/0:31,1:19:20.49:0,20,146	1/1:2,17:19:54.07:587,54,0	0/0:25,0:25:63.02:0,63,576	0/0:23,0:23:54.02:0,54,494	0/0:21,0:21:60:0,60,539	0/0:14,0:14:26.06:0,26,316	0/0:14,0:14:32.98:0,33,295	0/0:14,0:14:33.01:0,33,302	0/0:21,0:21:42.01:0,42,384	0/0:21,0:21:48:0,48,435	0/0:20,0:20:50.99:0,51,459	0/0:36,0:36:96.02:0,96,869	0/0:17,0:17:35.97:0,36,317	0/0:17,0:16:35.98:0,36,324	0/0:20,0:20:45.01:0,45,411	0/0:14,0:14:42.02:0,42,384	0/0:19,0:19:48.02:0,48,439	0/0:12,0:12:29.97:0,30,267	0/0:18,0:18:45:0,45,405	0/0:15,0:15:35.76:0,36,312	0/0:10,0:10:12.05:0,12,180	0/0:23,0:23:63.03:0,63,576	0/0:24,0:24:53.99:0,54,489	0/0:28,0:28:75:0,75,672	0/0:14,0:14:39.02:0,39,357
chr10	63937209	.	CGGCTGCGGGCTGCG	C	22568.47	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=13.977;DP=551;FS=4.101;HRun=0;HaplotypeScore=198.0888;InbreedingCoeff=0.9415;MQ=68.62;MQ0=0;MQRankSum=-14.190;QD=59.39;ReadPosRankSum=5.633;VQSLOD=4.4088;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:84.13:0,84,4582	0/0:7,0:7:21.07:0,21,1393	0/0:17,0:17:43.89:0,44,2069	0/0:11,0:11:20.53:0,21,582	0/0:16,0:16:27.09:0,27,1597	1/1:1,19:20:36.12:1495,36,0	1/1:1,23:24:30.10:1230,30,0	0/0:30,0:30:75.20:0,75,3787	1/1:1,19:20:36.12:1497,36,0	1/1:6,16:22:36.07:1360,36,0	1/1:0,3:3:6.02:250,6,0	1/1:0,22:22:42.14:1745,42,0	0/0:16,0:16:42.06:0,42,2549	1/1:1,15:16:36.12:1493,36,0	1/1:3,24:27:63.22:2616,63,0	1/1:2,29:31:48.16:1997,48,0	1/1:1,17:18:21.07:873,21,0	1/1:1,32:33:45.15:1700,45,0	1/1:2,31:33:94.15:1678,94,0	1/1:1,6:7:9.03:365,9,0	1/1:10,33:43:9.35:494,9,0	0/0:12,0:12:36.05:0,36,1666	0/0:9,0:9:21.04:0,21,623	0/0:21,0:21:57.15:0,57,3302	1/1:2,12:14:9.03:375,9,0	1/1:1,23:24:65.58:1903,66,0	1/1:1,14:15:30.10:1249,30,0	1/1:0,8:8:6.02:250,6,0
chr10	63937369	.	GTT	G	593.96	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.863;DP=675;FS=3.631;HRun=3;HaplotypeScore=79.0489;InbreedingCoeff=0.9994;MQ=81.58;MQ0=0;MQRankSum=0.127;QD=39.60;ReadPosRankSum=1.017;VQSLOD=3.3001;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:90.29:0,90,1693	0/0:11,0:11:30.09:0,30,549	0/0:21,0:21:60.17:0,60,1058	0/0:19,0:19:50.75:0,51,854	1/1:0,15:15:45.15:689,45,0	0/0:33,0:33:96.32:0,96,1812	0/0:27,0:27:81.23:0,81,1495	0/0:31,0:31:90.30:0,90,1674	0/0:23,0:23:66.21:0,66,1241	0/0:29,0:29:84.28:0,84,1582	0/0:19,0:19:57.20:0,57,1101	0/0:16,0:16:45.15:0,45,858	0/0:14,0:14:42.14:0,42,811	0/0:19,0:19:57.20:0,57,1083	0/0:38,0:38:99:0,111,2110	0/0:33,0:33:99:0,99,1882	0/0:32,0:32:93.32:0,93,1795	0/0:26,0:26:75.26:0,75,1448	0/0:23,0:23:69.22:0,69,1289	0/0:25,0:25:75.26:0,75,1438	0/0:42,0:42:99:0,123,2295	0/0:20,0:20:57.19:0,57,1058	0/0:19,0:19:54.16:0,54,979	0/0:23,0:23:69.23:0,69,1301	0/0:22,0:22:66.23:0,66,1275	0/0:22,0:22:66.22:0,66,1244	0/0:23,0:23:69.24:0,69,1328	0/0:19,0:18:57.20:0,57,1101
chr10	63937805	.	AT	A	679.24	PASS	AB=0.941;AC=3;AF=0.054;AN=56;BaseQRankSum=6.897;DP=686;FS=0.666;HRun=9;HaplotypeScore=66.5899;InbreedingCoeff=0.6222;MQ=73.23;MQ0=0;MQRankSum=0.911;QD=13.32;ReadPosRankSum=0.043;VQSLOD=3.3973;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:72.19:0,72,813	0/0:11,0:11:33.10:0,33,381	0/1:15,1:16:15.01:15,0,277	0/0:10,0:10:7.92:0,8,213	1/1:4,31:35:84.03:769,84,0	0/0:26,0:26:78.23:0,78,900	0/0:28,0:28:69.19:0,69,786	0/0:38,0:38:90.26:0,90,1030	0/0:35,0:35:93.26:0,93,1063	0/0:29,0:30:78.04:0,78,861	0/0:24,0:24:66.18:0,66,752	0/0:23,0:23:60.18:0,60,693	0/0:23,0:23:63.14:0,63,705	0/0:25,0:25:54.16:0,54,623	0/0:32,0:32:81.23:0,81,927	0/0:33,0:33:87.25:0,87,995	0/0:32,0:32:87.22:0,87,982	0/0:15,0:15:36.11:0,36,415	0/0:19,0:19:51.15:0,51,588	0/0:32,1:33:50.76:0,51,838	0/0:22,0:22:54.14:0,54,613	0/0:25,0:26:66.03:0,66,742	0/0:17,0:17:42.12:0,42,484	0/0:20,0:21:59.99:0,60,654	0/0:25,0:25:69.21:0,69,796	0/0:28,0:28:78.22:0,78,893	0/0:19,0:19:54.10:0,54,598	0/0:14,0:14:36.11:0,36,415
chr10	63937998	.	C	CTGTGTG	24832.48	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=6.000;DP=772;FS=1.321;HRun=0;HaplotypeScore=204.2569;InbreedingCoeff=0.9512;MQ=58.28;MQ0=1;MQRankSum=-12.583;QD=40.38;ReadPosRankSum=0.974;VQSLOD=4.7625;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:43:37.19:855,37,0	1/1:7,0:7:6.01:88,6,0	0/0:29,0:25:30.08:0,30,745	0/0:30,0:27:37.94:0,38,746	1/1:18,0:23:12.04:314,12,0	1/1:7,19:31:54.19:1792,54,0	1/1:12,10:24:33.11:1028,33,0	1/1:32,1:39:52.41:1246,52,0	1/1:11,11:24:24.08:787,24,0	1/1:18,12:30:63.20:1783,63,0	1/1:9,12:21:18.05:599,18,0	1/1:11,21:37:63.22:1944,63,0	0/0:31,0:31:90.31:0,90,1878	1/1:7,17:26:42.14:1337,42,0	1/1:18,28:50:75.26:2311,75,0	1/1:10,36:51:93.32:2956,93,0	1/1:14,13:30:39.13:1095,39,0	1/1:5,7:15:26.21:658,26,0	1/1:15,6:22:30.08:839,30,0	1/1:12,9:22:23.70:792,24,0	1/1:16,11:29:8.51:238,9,0	0/0:18,0:18:42.14:0,42,838	0/0:16,0:17:36.12:0,36,709	0/0:30,0:30:75.26:0,75,1534	1/1:7,11:21:30.10:935,30,0	1/1:15,19:35:70.48:1977,70,0	1/1:14,8:24:30.10:919,30,0	1/1:3,6:10:12.04:339,12,0
chr10	63939135	.	C	CT	6179.07	PASS	AB=0.865;AC=46;AF=0.821;AN=56;BaseQRankSum=-2.746;DP=566;FS=1.064;HRun=11;HaplotypeScore=68.3971;InbreedingCoeff=0.2337;MQ=63.91;MQ0=8;MQRankSum=-1.566;QD=11.55;ReadPosRankSum=0.668;VQSLOD=4.5001;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:35,0:34:48.61:296,49,0	1/1:4,0:4:5.71:23,6,0	0/1:23,0:7:12.73:13,0,19	0/1:22,0:11:23.01:23,0,41	0/1:11,13:26:15.47:245,0,15	1/1:4,19:23:47.83:467,48,0	1/1:7,6:13:6.19:222,6,0	1/1:31,13:44:17.39:609,17,0	1/1:8,10:19:7.85:91,8,0	1/1:2,10:11:23.99:225,24,0	1/1:2,6:8:11.98:111,12,0	1/1:4,14:18:9.02:91,9,0	0/0:17,0:17:35.84:0,36,278	1/1:4,12:16:0.83:190,1,0	1/1:8,14:24:12.76:285,13,0	1/1:2,18:21:29.31:288,29,0	1/1:5,19:24:24.87:432,25,0	1/1:8,23:30:13.30:392,13,0	1/1:11,17:26:51.44:501,51,0	1/1:4,14:18:33.03:322,33,0	1/1:5,11:16:30.06:301,30,0	0/1:15,1:16:18.87:19,0,235	0/1:12,0:11:6.42:6,0,134	0/0:14,0:13:32.85:0,33,255	1/1:3,5:8:12.02:122,12,0	1/1:6,21:27:16.63:516,17,0	0/1:11,17:30:10.61:226,0,11	1/1:1,11:12:17.83:166,18,0
chr10	63939148	.	T	TTC	600.93	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=1.162;DP=521;FS=4.660;HRun=0;HaplotypeScore=80.7866;InbreedingCoeff=0.6907;MQ=58.11;MQ0=10;MQRankSum=-0.736;QD=15.02;ReadPosRankSum=1.654;VQSLOD=2.9591;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:23,11:33:29.76:684,30,0	1/1:4,0:4:1.31:23,1,0	0/0:27,0:5:8.97:0,9,72	0/0:24,0:8:1.79:0,2,89	0/0:26,0:26:67.83:0,68,784	0/0:22,0:22:49.06:0,49,613	0/0:12,0:12:26.38:0,26,387	0/0:38,0:37:61.03:0,61,928	0/0:13,0:13:14.73:0,15,126	0/0:13,0:11:29.35:0,29,350	0/0:9,0:9:21:0,21,262	0/0:15,0:15:12.04:0,12,165	0/0:14,0:14:42.08:0,42,552	0/0:13,0:13:27.08:0,27,361	0/0:22,0:22:45.54:0,46,545	0/0:18,0:18:36.02:0,36,424	0/0:23,0:23:57.13:0,57,725	0/0:33,0:32:60.13:0,60,772	0/0:26,0:22:56.48:0,56,600	0/0:13,0:13:32.34:0,32,318	0/0:14,0:14:35.79:0,36,477	0/0:14,0:14:41.52:0,42,441	0/0:10,0:9:21.16:0,21,244	0/0:16,0:15:35.76:0,36,492	0/0:6,0:6:15.05:0,15,210	0/0:21,0:21:49.93:0,50,635	0/0:25,0:25:29.22:0,29,402	0/0:14,0:14:6.82:0,7,248
chr10	63939228	.	A	AC	902.96	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-2.749;DP=485;FS=3.976;HRun=4;HaplotypeScore=50.9348;InbreedingCoeff=0.9765;MQ=62.09;MQ0=5;MQRankSum=-0.014;QD=27.36;ReadPosRankSum=2.134;VQSLOD=2.8586;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,22:24:54.18:736,54,0	1/1:0,7:7:21.07:287,21,0	0/0:16,0:11:25.31:0,25,263	0/0:19,0:11:30:0,30,312	0/0:23,0:23:69.16:0,69,769	0/0:14,0:14:42.12:0,42,476	0/0:22,0:22:63.10:0,63,670	0/0:28,0:27:78.17:0,78,862	0/0:16,0:15:42.08:0,42,462	0/0:12,0:12:36.10:0,36,402	0/0:17,0:16:48.06:0,48,517	0/0:16,0:16:45.13:0,45,510	0/0:13,0:13:39.11:0,39,441	0/0:11,0:11:30.09:0,30,339	0/0:18,0:18:45.11:0,45,510	0/0:18,0:18:54.15:0,54,612	0/0:30,0:30:84.24:0,84,952	0/0:29,0:29:81.23:0,81,917	0/0:10,0:10:30.09:0,30,340	0/0:15,0:15:42.12:0,42,475	0/0:25,0:25:57.03:0,57,613	0/0:15,0:15:42.09:0,42,461	0/0:17,0:17:45.06:0,45,495	0/0:21,0:21:50.89:0,51,549	0/0:6,0:6:18.05:0,18,204	0/0:18,0:18:47.93:0,48,500	0/0:19,0:19:45.08:0,45,502	0/0:4,0:4:12.03:0,12,136
chr10	63940075	.	CG	C	728.02	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.351;DP=532;FS=6.660;HRun=5;HaplotypeScore=77.1797;InbreedingCoeff=0.9646;MQ=73.19;MQ0=8;MQRankSum=-0.119;QD=20.22;ReadPosRankSum=-0.260;VQSLOD=2.7360;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:15,15:30:71.65:737,72,0	1/1:3,3:6:11.91:107,12,0	0/0:62,0:32:71.96:0,72,716	0/0:42,0:27:16.10:0,16,318	0/0:14,0:14:35.99:0,36,425	0/0:20,0:20:57.05:0,57,696	0/0:22,0:22:59.91:0,60,675	0/0:25,0:25:60.10:0,60,722	0/0:15,0:15:41.93:0,42,466	0/0:16,0:16:38.78:0,39,447	0/0:8,0:8:23.97:0,24,275	0/0:11,0:11:30.06:0,30,385	0/0:8,0:8:23.91:0,24,295	0/0:10,0:10:27.05:0,27,344	0/0:16,0:16:38.56:0,39,434	0/0:17,0:17:47.93:0,48,542	0/0:31,0:31:85.02:0,85,1064	0/0:16,0:17:41.16:0,41,589	0/0:21,0:21:54.06:0,54,645	0/0:17,0:17:47.12:0,47,628	0/0:15,0:15:45.07:0,45,571	0/0:13,0:13:29.96:0,30,340	0/0:14,0:13:26.71:0,27,232	0/0:14,0:14:15.04:0,15,463	0/0:14,0:14:42.05:0,42,528	0/0:22,0:22:46.01:0,46,571	0/0:19,0:19:50.88:0,51,598	0/0:11,0:11:27.06:0,27,349
chr10	63940091	.	T	TA	639.27	PASS	AB=0.563;AC=3;AF=0.054;AN=56;BaseQRankSum=4.783;DP=597;FS=3.500;HRun=10;HaplotypeScore=81.7868;InbreedingCoeff=0.7261;MQ=74.15;MQ0=8;MQRankSum=0.110;QD=14.87;ReadPosRankSum=-0.277;VQSLOD=3.9709;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:24,10:34:32.50:546,32,0	0/1:2,7:9:0.59:199,0,1	0/0:55,0:30:5.51:0,6,129	0/0:38,1:25:8.62:0,9,132	0/0:17,0:17:38.92:0,39,319	0/0:18,0:19:33.42:0,33,311	0/0:20,0:20:50.89:0,51,414	0/0:35,0:35:68.86:0,69,566	0/0:19,0:19:53.91:0,54,442	0/0:21,0:21:44.92:0,45,369	0/0:10,0:11:23.94:0,24,193	0/0:12,0:12:20.96:0,21,172	0/0:14,0:14:35.95:0,36,295	0/0:13,0:13:32.94:0,33,270	0/0:15,0:16:34.96:0,35,276	0/0:20,0:21:55.96:0,56,449	0/0:35,0:35:95.86:0,96,787	0/0:21,0:21:50.89:0,51,413	0/0:21,0:21:53.93:0,54,443	0/0:18,0:18:38.91:0,39,314	0/0:19,0:19:47.94:0,48,394	0/0:15,0:15:41.93:0,42,341	0/0:6,0:6:8.96:0,9,74	0/0:18,0:18:38.93:0,39,320	0/0:18,0:18:44.92:0,45,366	0/0:28,0:28:71.89:0,72,591	0/0:19,0:19:42.81:0,43,408	0/0:18,0:18:47.92:0,48,394
chr10	63940768	.	C	CA	600.49	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=4.190;DP=652;FS=25.329;HRun=0;HaplotypeScore=150.3364;InbreedingCoeff=0.7717;MQ=73.11;MQ0=0;MQRankSum=-5.519;QD=16.23;ReadPosRankSum=-3.610;VQSLOD=2.0779;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:3,11:14:41.94:512,42,0	1/1:2,3:5:15:193,15,0	0/0:12,0:11:22.78:0,23,228	0/1:18,0:18:22.84:23,0,263	0/0:31,0:31:93.26:0,93,1259	0/0:21,0:21:60.20:0,60,836	0/0:25,0:25:72.22:0,72,974	0/0:22,0:22:63.12:0,63,821	0/0:20,0:20:60.17:0,60,790	0/0:29,0:29:83.08:0,83,1065	0/0:18,0:18:51.16:0,51,695	0/0:33,0:33:92.51:0,93,1244	0/0:25,0:25:72.24:0,72,997	0/0:20,0:20:60.17:0,60,804	0/0:42,0:42:99:0,111,1533	0/0:37,0:37:99:0,99,1348	0/0:26,0:26:69.21:0,69,946	0/0:23,0:23:63.15:0,63,840	0/0:17,0:17:51.16:0,51,693	0/0:20,0:19:57.04:0,57,748	0/0:38,0:38:99:0,108,1417	0/0:20,0:20:48.14:0,48,651	0/0:25,0:25:66.21:0,66,918	0/0:20,0:20:60.19:0,60,822	0/0:27,0:27:78.23:0,78,1048	0/0:30,0:30:87.25:0,87,1151	0/0:25,0:25:72.21:0,72,968	0/0:9,0:9:24.08:0,24,335
chr10	63941128	.	GA	G	1088.41	PASS	AB=0.938;AC=5;AF=0.089;AN=56;BaseQRankSum=10.696;DP=719;FS=0.514;HRun=10;HaplotypeScore=73.6526;InbreedingCoeff=0.7239;MQ=74.81;MQ0=0;MQRankSum=-2.465;QD=15.12;ReadPosRankSum=1.269;VQSLOD=4.0432;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,45:53:99:1120,129,0	1/1:0,4:4:9:78,9,0	0/0:14,0:14:27.07:0,27,295	0/1:14,1:14:11.81:12,0,124	0/0:26,0:26:66.18:0,66,730	0/0:33,1:34:67.21:0,67,970	0/0:23,0:23:57.14:0,57,623	0/0:29,0:30:63.14:0,63,674	0/0:26,0:26:72.16:0,72,773	0/0:35,1:36:58.24:0,58,870	0/0:19,1:20:48.11:0,48,522	0/0:30,2:32:58.16:0,58,861	0/0:31,1:32:70.15:0,70,973	0/0:23,0:23:57.14:0,57,622	0/0:36,1:37:76.18:0,76,1044	0/0:33,0:34:93.06:0,93,995	0/0:24,0:25:69.02:0,69,744	0/0:30,0:30:81.19:0,81,885	0/0:13,0:13:35.93:0,36,363	0/0:15,0:15:36.08:0,36,389	0/0:24,0:24:57.12:0,57,613	0/0:32,0:34:89.89:0,90,948	0/0:23,0:23:63.17:0,63,694	0/0:11,0:11:33.08:0,33,357	0/0:32,0:32:88.45:0,88,948	0/0:28,0:28:67.42:0,67,733	0/0:29,3:32:5.85:0,6,694	0/0:12,0:12:21.06:0,21,232
chr10	63942572	.	ACCCTGCTCCCT	A	1137.81	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.303;DP=509;FS=2.306;HRun=0;HaplotypeScore=160.1869;InbreedingCoeff=0.9349;MQ=68.27;MQ0=0;MQRankSum=-5.328;QD=34.48;ReadPosRankSum=0.127;VQSLOD=3.2097;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,29:31:36.12:1135,36,0	1/1:2,0:2:6.02:115,6,0	0/0:19,0:17:44.63:0,45,1872	0/0:15,0:15:42.14:0,42,1561	0/0:13,0:13:39.12:0,39,1812	0/0:14,0:14:42.14:0,42,2286	0/0:24,0:24:66.23:0,66,3261	0/0:11,0:11:33.11:0,33,1522	0/0:20,0:20:54.18:0,54,2630	0/0:12,0:12:30.09:0,30,1388	0/0:7,0:7:18.06:0,18,1008	0/0:21,0:21:57.20:0,57,3039	0/0:13,0:13:33.11:0,33,1800	0/0:28,0:28:84.28:0,84,4166	0/0:27,0:26:75.26:0,75,3871	0/0:15,0:15:36.12:0,36,1852	0/0:19,0:19:54.17:0,54,2706	0/0:16,0:16:45.15:0,45,2312	0/0:15,0:15:36.10:0,36,1112	0/0:16,0:16:45.15:0,45,2377	0/0:59,0:59:99:0,154,7164	0/0:8,0:8:24.08:0,24,1341	0/0:13,0:13:36.12:0,36,1992	0/0:38,0:38:99:0,108,5751	0/0:18,0:18:54.18:0,54,2568	0/0:18,0:18:45.15:0,45,2456	0/0:9,0:9:27.09:0,27,1365	0/0:8,0:8:21.07:0,21,1033
chr10	63943193	.	C	CCTTCCTTCTTT	3809.08	PASS	AB=0.733;AC=3;AF=0.054;AN=56;BaseQRankSum=0.611;DP=586;FS=3.737;HRun=0;HaplotypeScore=180.7540;InbreedingCoeff=0.6454;MQ=75.53;MQ0=0;MQRankSum=-7.880;QD=77.74;ReadPosRankSum=-3.476;VQSLOD=3.0582;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:22,14:38:54.18:2674,54,0	0/1:7,4:11:76.02:1135,0,76	0/0:20,0:20:30.10:0,30,872	0/0:16,0:16:24.08:0,24,868	0/0:18,0:18:48.14:0,48,1498	0/0:23,0:23:66.21:0,66,2069	0/0:23,0:23:51.14:0,51,1362	0/0:39,0:38:75.25:0,75,2222	0/0:19,0:19:51.18:0,51,1601	0/0:18,0:18:42.14:0,42,1275	0/0:18,0:18:48.15:0,48,1400	0/0:22,0:22:42.14:0,42,1328	0/0:9,0:9:24.08:0,24,750	0/0:20,0:20:39.13:0,39,1245	0/0:19,0:19:45.15:0,45,1472	0/0:21,0:21:57.20:0,57,1853	0/0:28,0:28:75.24:0,75,2212	0/0:27,0:27:69.18:0,69,2029	0/0:18,0:18:48.16:0,48,1490	0/0:26,0:26:60.21:0,60,1821	0/0:29,0:29:75.26:0,75,2295	0/0:17,0:17:39.13:0,39,1178	0/0:17,0:17:39.13:0,39,1202	0/0:21,0:21:57.20:0,57,1878	0/0:19,0:19:48.16:0,48,1380	0/0:24,0:24:60.19:0,60,1834	0/0:14,0:14:33.11:0,33,974	0/0:12,0:12:36.09:0,36,1049
chr10	63943732	.	A	AATGT	1511.53	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=-0.031;DP=1156;FS=0.704;HRun=0;HaplotypeScore=190.4475;InbreedingCoeff=0.8628;MQ=55.95;MQ0=23;MQRankSum=-3.282;QD=17.37;ReadPosRankSum=0.260;VQSLOD=3.2033;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:23,10:33:20.59:904,21,0	1/1:1,15:16:30.06:727,30,0	0/0:38,0:9:27.05:0,27,415	0/0:32,0:9:11.80:0,12,116	0/0:33,0:32:87.24:0,87,1421	0/0:27,0:27:72.21:0,72,1194	0/0:25,0:25:57.16:0,57,940	0/0:58,0:54:99:0,138,1990	0/0:50,0:50:99:0,135,2326	0/0:72,0:71:99:0,196,3324	0/0:21,0:20:45.15:0,45,801	0/0:60,0:60:99:0,163,2741	0/0:65,0:65:99:0,166,2890	0/0:45,0:45:99:0,133,2303	0/0:53,0:53:99:0,150,2530	0/0:78,0:78:99:0,217,3733	0/0:31,0:31:39.74:0,40,1258	0/1:38,0:38:0:0,0,1313	0/0:17,0:16:48.15:0,48,796	0/0:53,0:53:99:0,147,2421	0/0:55,0:53:99:0,138,2264	0/0:44,0:44:99:0,120,2015	0/0:17,0:17:48.08:0,48,809	0/0:26,0:26:61.41:0,61,963	0/0:30,0:30:78.23:0,78,1293	0/0:71,0:71:99:0,199,3296	0/0:37,0:36:99:0,105,1819	0/0:31,0:31:81.20:0,81,1311
chr10	63944062	.	G	GATGT	1055.95	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.977;DP=988;FS=0.000;HRun=0;HaplotypeScore=165.0663;InbreedingCoeff=0.9616;MQ=58.33;MQ0=1;MQRankSum=-5.200;QD=34.06;ReadPosRankSum=-1.266;VQSLOD=3.0853;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,7:15:20.89:492,21,0	1/1:2,13:16:27.09:684,27,0	0/0:15,0:7:18.05:0,18,284	0/0:9,0:3:8.77:0,9,116	0/0:45,0:45:99:0,123,2110	0/0:25,0:25:72.23:0,72,1223	0/0:16,0:15:36.12:0,36,626	0/0:55,0:55:99:0,120,2017	0/0:56,0:56:99:0,144,2353	0/0:80,0:80:99:0,214,3556	0/0:28,0:28:69.21:0,69,1144	0/0:47,0:47:99:0,132,2251	0/0:51,0:51:99:0,138,2283	0/0:36,0:36:93.30:0,93,1590	0/0:60,0:60:99:0,163,2745	0/0:49,0:49:99:0,123,2076	0/0:23,0:25:64.42:0,64,1064	0/0:15,0:15:24.15:0,24,451	0/0:20,0:20:57.17:0,57,916	0/0:33,0:33:90.28:0,90,1500	0/0:25,0:25:72.17:0,72,1164	0/0:39,0:39:96.33:0,96,1660	0/0:39,0:39:99:0,111,1792	0/0:28,0:29:65.81:0,66,1095	0/0:38,0:38:99:0,105,1672	0/0:57,1:58:83.50:0,84,2584	0/0:40,0:39:93.22:0,93,1499	0/0:24,0:24:63.21:0,63,1063
chr10	63944201	.	CATGT	C	13499.85	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=11.061;DP=923;FS=4.099;HRun=0;HaplotypeScore=173.0033;InbreedingCoeff=0.9537;MQ=58.04;MQ0=5;MQRankSum=0.836;QD=17.44;ReadPosRankSum=2.582;VQSLOD=4.2009;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:30,21:51:57.13:859,57,0	1/1:4,14:18:30.10:479,30,0	0/0:5,0:2:3.01:0,3,72	0/0:15,0:7:15.03:0,15,208	1/1:17,26:43:32.23:544,32,0	1/1:8,18:26:21.07:336,21,0	1/1:6,13:19:15.05:240,15,0	1/1:31,18:49:51.06:648,51,0	1/1:21,26:47:51.03:816,51,0	1/1:19,32:50:96.31:1462,96,0	1/1:10,17:26:23.89:356,24,0	1/1:13,23:36:45.15:720,45,0	0/0:42,0:42:87.28:0,87,1923	1/1:12,18:30:24.08:384,24,0	1/1:14,33:48:63:1008,63,0	1/1:16,22:38:36.12:576,36,0	1/1:9,13:21:27.09:432,27,0	1/1:5,18:21:21.07:331,21,0	1/1:12,11:22:30.05:422,30,0	1/1:15,26:41:35.61:546,36,0	1/1:22,32:54:35.40:575,35,0	0/0:34,1:34:56.93:0,57,1112	0/0:22,0:22:39.13:0,39,879	0/0:30,0:30:51.17:0,51,1147	1/1:11,21:32:36.12:576,36,0	1/1:21,30:51:90.22:1288,90,0	1/1:14,15:29:23.10:369,23,0	1/1:3,13:16:33.11:528,33,0
chr10	63944928	.	GTA	G	2241.64	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.964;DP=694;FS=1.707;HRun=0;HaplotypeScore=81.3161;InbreedingCoeff=0.9996;MQ=81.03;MQ0=0;MQRankSum=-3.492;QD=33.96;ReadPosRankSum=2.854;VQSLOD=6.0397;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,53:53:99:1848,129,0	1/1:0,13:13:36.12:516,36,0	0/0:22,0:22:60.17:0,60,1002	0/0:16,0:16:45.11:0,45,734	0/0:22,0:22:66.23:0,66,1192	0/0:25,0:25:72.23:0,72,1289	0/0:30,0:30:90.29:0,90,1604	0/0:29,0:29:87.27:0,87,1503	0/0:20,0:20:60.19:0,60,1067	0/0:35,0:35:99:0,105,1880	0/0:11,0:11:30.10:0,30,540	0/0:30,0:30:90.27:0,90,1544	0/0:27,0:27:78.25:0,78,1388	0/0:18,0:18:54.19:0,54,988	0/0:33,0:33:93.32:0,93,1704	0/0:35,0:35:99:0,102,1765	0/0:32,0:32:90.23:0,90,1516	0/0:19,0:19:54.19:0,54,990	0/0:20,0:20:54.17:0,54,922	0/0:21,0:21:60.21:0,60,1078	0/0:28,0:28:84.27:0,84,1496	0/0:16,0:16:48.16:0,48,879	0/0:21,0:21:60.21:0,60,1098	0/0:24,0:24:69.24:0,69,1264	0/0:21,0:21:57.17:0,57,986	0/0:26,1:27:38.28:0,38,1353	0/0:28,0:28:84.29:0,84,1524	0/0:18,0:18:54.12:0,54,923
chr10	63945694	.	GT	G	580.98	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.504;DP=599;FS=3.847;HRun=7;HaplotypeScore=62.4153;InbreedingCoeff=0.9970;MQ=78.70;MQ0=0;MQRankSum=-1.690;QD=18.74;ReadPosRankSum=1.487;VQSLOD=3.4893;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,20:22:48.11:489,48,0	1/1:0,9:9:21.04:212,21,0	0/0:32,0:29:41.36:0,41,655	0/0:17,0:14:29.87:0,30,324	0/0:33,0:33:90.22:0,90,1111	0/0:22,0:22:57.12:0,57,675	0/0:20,0:20:51.15:0,51,629	0/0:32,0:32:90.23:0,90,1113	0/0:18,0:18:54.16:0,54,665	0/0:28,0:28:78.25:0,78,976	0/0:19,0:19:53.96:0,54,654	0/0:22,0:22:63.20:0,63,793	0/0:12,0:12:33.02:0,33,395	0/0:15,0:15:45.14:0,45,566	0/0:22,0:22:66.21:0,66,826	0/0:21,0:21:63.20:0,63,792	0/0:13,0:13:30.10:0,30,377	0/0:15,0:15:45.14:0,45,566	0/0:27,0:27:81.23:0,81,994	0/0:25,0:25:72.18:0,72,847	0/0:21,0:21:55.39:0,55,666	0/0:19,0:19:57.15:0,57,675	0/0:18,0:18:51.16:0,51,641	0/0:13,0:13:32.98:0,33,380	0/0:24,0:24:69.21:0,69,857	0/0:29,0:29:78.24:0,78,970	0/0:31,0:31:93.29:0,93,1157	0/0:19,0:19:51.46:0,51,674
chr10	63946815	.	CT	C	1451	PASS	AB=0.747;AC=33;AF=0.589;AN=56;BaseQRankSum=-1.587;DP=420;FS=4.544;HRun=17;HaplotypeScore=56.1780;InbreedingCoeff=0.2866;MQ=66.84;MQ0=15;MQRankSum=2.105;QD=4.87;ReadPosRankSum=1.672;VQSLOD=1.6840;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:16:31.62:0,32,174	0/0:4,0:3:8.56:0,9,44	0/0:36,0:13:18.53:0,19,118	0/0:37,0:15:16.76:0,17,100	1/1:3,10:13:16.79:96,17,0	1/1:3,10:14:22.17:122,22,0	1/1:3,11:16:24.92:132,25,0	1/1:9,9:18:16.19:86,16,0	1/1:4,4:8:10.72:65,11,0	0/1:8,4:12:1.59:40,0,2	1/1:3,10:14:1.75:99,2,0	0/1:2,7:11:1.89:75,0,2	0/1:5,3:8:21.59:22,0,29	1/1:5,1:10:8.55:33,9,0	1/1:3,11:14:17.47:100,17,0	0/1:7,5:13:16.76:86,0,17	1/1:8,16:22:26.52:142,27,0	0/1:13,2:19:45.32:57,0,45	0/1:15,0:16:29.95:30,0,83	0/1:7,9:17:0.04:78,0,0	1/1:2,6:10:15.71:78,16,0	0/0:12,2:14:0.24:0,0,85	0/0:8,0:8:14.32:0,14,101	0/1:8,0:9:8.77:9,0,109	1/1:6,2:9:5.47:33,5,0	1/1:6,10:19:29.86:139,30,0	0/1:12,6:21:20.45:108,0,20	0/0:3,0:3:2.92:0,3,17
chr10	63949457	.	C	CCAGG	1190.50	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-6.100;DP=493;FS=8.454;HRun=0;HaplotypeScore=83.6723;InbreedingCoeff=0.9281;MQ=60.49;MQ0=0;MQRankSum=-3.816;QD=51.76;ReadPosRankSum=-4.238;VQSLOD=3.1294;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,117,2182	0/0:10,0:10:27.09:0,27,491	0/0:12,0:12:32.79:0,33,481	0/0:14,0:13:27.03:0,27,414	0/0:18,0:18:54.19:0,54,1007	0/0:20,0:20:48.15:0,48,854	0/0:18,0:18:51.16:0,51,917	1/1:5,15:23:60.14:1285,60,0	0/0:16,0:16:45.15:0,45,831	0/0:15,0:15:45.15:0,45,832	0/0:5,0:5:15.04:0,15,249	0/0:20,0:20:51.17:0,51,952	0/0:16,0:16:42.14:0,42,783	0/0:18,0:18:48.13:0,48,813	0/0:14,0:14:33.11:0,33,598	0/0:19,0:19:57.20:0,57,1054	0/0:22,0:22:63.20:0,63,1131	0/0:16,0:16:45.15:0,45,838	0/0:12,0:12:36.12:0,36,671	0/0:14,0:14:42.14:0,42,783	0/0:18,0:18:51.16:0,51,918	0/0:19,0:19:54.17:0,54,976	0/0:10,0:10:30.10:0,30,559	0/0:26,0:26:69.22:0,69,1254	0/0:18,0:18:54.16:0,54,968	0/0:30,0:30:84.29:0,84,1566	0/0:22,0:22:66.21:0,66,1198	0/0:4,0:4:9:0,9,134
chr10	63949603	.	C	CAA	4496.46	PASS	AB=0.921;AC=39;AF=0.696;AN=56;BaseQRankSum=4.357;DP=442;FS=1.129;HRun=6;HaplotypeScore=102.1602;InbreedingCoeff=0.6075;MQ=45.40;MQ0=31;MQRankSum=-5.976;QD=13.88;ReadPosRankSum=-0.879;VQSLOD=1.2598;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:15,1:17:28.06:292,28,0	1/1:4,2:6:14.06:165,14,0	0/0:45,0:9:22.22:0,22,213	0/1:38,0:2:0:0,0,0	0/0:22,0:22:36.91:0,37,375	1/1:14,4:17:11.92:218,12,0	1/1:6,1:6:11.83:88,12,0	0/1:18,0:17:1.98:86,0,2	1/1:6,2:8:12.65:164,13,0	1/1:21,5:26:45.06:460,45,0	1/1:9,4:14:29.12:302,29,0	1/1:6,0:6:12.96:74,13,0	0/0:11,0:11:30.09:0,30,353	0/1:7,0:7:14:19,0,14	1/1:8,2:10:10.84:153,11,0	1/1:14,1:17:29.79:254,30,0	1/1:14,1:14:1.86:227,2,0	0/1:12,0:12:3.81:74,0,4	1/1:11,4:15:36.92:451,37,0	1/1:14,2:18:36.45:356,36,0	0/1:5,2:5:27.19:62,0,27	0/0:14,0:14:29.88:0,30,340	0/0:13,0:13:32.45:0,32,361	0/0:12,0:10:14.56:0,15,159	1/1:11,5:16:27.61:360,28,0	1/1:12,4:15:16.82:285,17,0	1/1:17,1:17:31.60:270,32,0	1/1:3,2:5:4:137,4,0
chr10	63949609	.	AC	A	3619.94	PASS	AB=0.984;AC=40;AF=0.714;AN=56;BaseQRankSum=6.979;DP=444;FS=0.527;HRun=1;HaplotypeScore=93.7336;InbreedingCoeff=0.7214;MQ=48.16;MQ0=28;MQRankSum=-6.214;QD=11.07;ReadPosRankSum=-1.101;VQSLOD=1.2027;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:17,1:18:29.15:227,29,0	1/1:6,0:6:14.52:93,15,0	0/0:46,0:9:20.70:0,21,168	0/1:42,0:3:0:0,0,0	0/0:22,0:21:41.18:0,41,481	1/1:16,0:14:31.51:200,32,0	1/1:9,0:8:16.26:89,16,0	1/1:14,0:12:23.90:189,24,0	1/1:8,0:8:14.16:80,14,0	1/1:22,4:26:56.20:333,56,0	1/1:16,1:17:38.01:266,38,0	1/1:7,0:6:16.40:88,16,0	0/0:10,1:11:28.62:0,29,353	0/1:8,0:8:19.79:75,0,20	1/1:10,0:10:23.67:165,24,0	1/1:18,0:18:29.60:196,30,0	0/1:14,1:13:1.93:94,0,2	1/1:17,0:15:18.27:164,18,0	1/1:16,0:14:38.07:271,38,0	1/1:16,2:18:43.42:257,43,0	0/1:6,0:4:26:54,0,26	0/0:12,0:12:30.30:0,30,372	0/0:14,0:14:33.72:0,34,383	0/0:12,0:11:21.38:0,21,239	1/1:18,0:18:36.49:250,36,0	1/1:15,0:14:29.76:216,30,0	1/1:16,1:16:34.48:233,34,0	1/1:6,0:5:11.69:81,12,0
chr10	63949613	.	AAAC	A	205.87	PASS	AB=0.979;AC=10;AF=0.179;AN=56;BaseQRankSum=1.059;DP=447;FS=11.619;HRun=0;HaplotypeScore=120.5070;InbreedingCoeff=-0.0141;MQ=51.85;MQ0=28;MQRankSum=-6.151;QD=1.43;ReadPosRankSum=-3.130;VQSLOD=0.7646;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:16,1:17:3.98:0,4,340	0/1:5,0:5:3.34:3,0,116	0/0:42,0:10:14.12:0,14,169	0/1:44,0:6:5.17:5,0,35	0/0:20,0:19:45.13:0,45,850	0/1:16,0:15:24.25:24,0,214	0/1:9,0:9:14.35:86,0,14	1/1:13,0:11:14.89:86,15,0	0/0:9,0:9:24.08:0,24,374	0/1:23,2:25:61.13:61,0,300	0/0:17,0:17:20.02:0,20,312	0/1:7,0:6:17.20:17,0,43	0/0:11,0:11:33.11:0,33,643	0/0:9,0:9:2.73:0,3,314	0/0:11,0:11:9.33:0,9,231	0/0:18,0:18:29.65:0,30,369	0/0:14,1:13:0.87:0,1,298	0/0:17,0:15:19.21:0,19,192	0/0:19,0:16:24.56:0,25,456	0/1:17,2:19:55.09:55,0,331	0/0:6,0:4:5.63:0,6,99	0/0:12,0:12:33.11:0,33,679	0/0:14,0:14:32.26:0,32,562	0/0:11,0:10:24.08:0,24,456	0/0:20,0:20:9.49:0,9,371	0/0:17,0:16:17.33:0,17,342	0/0:17,0:16:3.61:0,4,240	0/1:6,0:5:1.69:2,0,151
chr10	63949645	.	C	CA	234	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.565;DP=467;FS=16.258;HRun=9;HaplotypeScore=126.6386;InbreedingCoeff=0.7797;MQ=59.53;MQ0=8;MQRankSum=-4.109;QD=12.32;ReadPosRankSum=-3.386;VQSLOD=0.9569;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:23:38.36:0,38,443	0/0:7,0:7:21.06:0,21,234	0/0:44,0:17:19.13:0,19,257	0/0:35,0:16:7.56:0,8,114	0/0:16,0:16:48.08:0,48,519	0/0:13,0:13:29.99:0,30,306	0/0:11,0:11:24.07:0,24,267	1/1:12,7:18:31.31:328,31,0	0/0:15,0:15:36.10:0,36,406	0/0:17,0:17:19.57:0,20,365	0/0:22,0:22:53.50:0,54,503	0/0:7,0:7:4.63:0,5,146	0/0:15,0:15:45.11:0,45,494	0/0:13,0:13:39.11:0,39,439	0/0:14,0:14:30.08:0,30,340	0/0:20,0:20:35.59:0,36,435	0/0:9,0:9:23.74:0,24,245	0/0:16,0:16:33.01:0,33,374	0/0:17,0:15:42.07:0,42,459	0/0:16,0:16:39.11:0,39,441	0/0:8,0:8:15.03:0,15,159	0/0:14,0:14:36.06:0,36,400	0/0:12,0:12:35.99:0,36,378	0/0:9,0:9:15:0,15,168	0/0:18,0:18:19.06:0,19,357	0/0:24,0:24:66.16:0,66,730	0/0:21,0:21:26.68:0,27,450	0/0:7,0:7:21.06:0,21,238
chr10	63949673	.	CA	C	270.36	PASS	AB=0.622;AC=1;AF=0.018;AN=56;BaseQRankSum=-4.505;DP=499;FS=10.265;HRun=11;HaplotypeScore=122.6985;InbreedingCoeff=0.4395;MQ=62.68;MQ0=7;MQRankSum=1.258;QD=9.66;ReadPosRankSum=-5.075;VQSLOD=0.3622;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:21:36.08:0,36,182	0/0:10,0:10:23.89:0,24,237	0/0:33,0:18:15.51:0,16,199	0/0:29,0:17:11.22:0,11,148	0/0:21,0:21:48.10:0,48,497	0/0:13,0:13:26.75:0,27,134	0/0:13,0:13:25.13:0,25,117	0/1:11,17:27:1.55:345,0,2	0/0:13,0:13:25.53:0,26,132	0/0:18,0:18:40.92:0,41,214	0/0:20,0:20:30.30:0,30,137	0/0:13,0:13:22.50:0,22,110	0/0:14,1:15:14.46:0,14,353	0/0:16,0:16:38.97:0,39,180	0/0:19,0:19:38.93:0,39,192	0/0:23,0:23:35.21:0,35,174	0/0:14,0:14:22.50:0,22,110	0/0:22,0:22:41.97:0,42,196	0/0:15,0:14:9.42:0,9,84	0/0:13,0:13:26.43:0,26,121	0/0:11,0:11:14.04:0,14,75	0/0:12,0:12:29.97:0,30,302	0/0:15,1:16:11.41:0,11,309	0/0:11,1:12:18.05:0,18,192	0/0:19,0:19:28.20:0,28,138	0/0:26,0:26:54.99:0,55,270	0/0:23,0:22:43.07:0,43,206	0/0:10,0:10:25.18:0,25,118
chr10	63949675	.	A	AAAAC	14401.67	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-9.264;DP=516;FS=3.669;HRun=0;HaplotypeScore=96.5021;InbreedingCoeff=0.9854;MQ=61.16;MQ0=7;MQRankSum=-2.414;QD=45.43;ReadPosRankSum=6.696;VQSLOD=5.1935;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:47.53:0,48,328	0/0:10,0:10:29.95:0,30,419	0/0:31,0:17:30.84:0,31,354	0/0:27,0:15:13.41:0,13,234	0/0:23,0:23:69.11:0,69,974	1/1:2,11:13:29.14:579,29,0	1/1:0,14:15:27.09:663,27,0	0/0:28,0:27:62.50:0,62,544	1/1:3,10:14:22.38:520,22,0	1/1:5,14:21:46.07:994,46,0	1/1:3,16:20:8.83:723,9,0	1/1:1,12:13:23.11:522,23,0	0/0:15,0:15:45.12:0,45,721	1/1:0,16:16:42.14:1031,42,0	1/1:2,17:20:40.96:936,41,0	1/1:4,20:24:44.09:976,44,0	1/1:3,12:16:23.90:530,24,0	1/1:0,22:24:45.15:1107,45,0	1/1:3,12:14:39.03:557,39,0	1/1:0,12:12:30.10:695,30,0	1/1:1,9:12:24.08:548,24,0	0/0:13,0:13:36.06:0,36,557	0/0:17,0:17:48.10:0,48,680	0/0:12,0:12:30.01:0,30,428	1/1:5,15:20:29.98:634,30,0	1/1:0,26:28:74.43:1640,74,0	1/1:3,18:23:47.27:1084,47,0	1/1:0,10:10:27.09:664,27,0
chr10	63950966	.	G	GAC	21245.23	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-2.039;DP=686;FS=4.214;HRun=0;HaplotypeScore=91.7029;InbreedingCoeff=0.9949;MQ=83.36;MQ0=1;MQRankSum=-4.421;QD=45.30;ReadPosRankSum=1.932;VQSLOD=6.3192;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,120,1680	0/0:10,0:10:30.10:0,30,427	0/0:23,0:22:60.13:0,60,790	0/0:28,0:27:66.13:0,66,866	0/0:17,0:17:39.13:0,39,558	1/1:1,23:25:63.22:1154,63,0	1/1:5,27:32:69.24:1263,69,0	1/1:1,25:26:72.20:1222,72,0	1/1:3,29:32:69.24:1263,69,0	1/1:3,25:28:75.25:1312,75,0	1/1:2,23:25:57.20:1044,57,0	1/1:1,27:28:69.24:1264,69,0	0/0:22,0:22:63.20:0,63,876	1/1:1,23:24:66.23:1209,66,0	1/1:2,19:21:48.16:879,48,0	1/1:2,30:32:78.27:1429,78,0	1/1:1,30:31:81.28:1484,81,0	1/1:1,9:10:27.09:495,27,0	1/1:4,18:23:57.15:950,57,0	1/1:0,21:21:48.16:876,48,0	1/1:0,34:33:90.31:1649,90,0	0/0:18,0:18:54.18:0,54,773	0/0:29,0:29:69.21:0,69,956	0/0:26,0:26:78.21:0,78,1061	1/1:2,15:17:42.14:770,42,0	1/1:1,34:35:99:1771,99,0	1/1:1,19:20:54.19:989,54,0	1/1:0,5:5:12.04:220,12,0
chr10	63951930	.	CT	C	536.49	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.138;DP=355;FS=1.816;HRun=9;HaplotypeScore=39.9747;InbreedingCoeff=0.6980;MQ=67.76;MQ0=0;MQRankSum=-1.023;QD=20.63;ReadPosRankSum=-4.173;VQSLOD=2.0347;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:63.25:0,63,333	0/0:5,0:5:8.63:0,9,45	0/0:5,0:6:11.84:0,12,103	0/0:7,0:7:15.04:0,15,163	0/0:22,0:22:60.18:0,60,692	0/0:14,0:14:39.12:0,39,450	0/0:16,0:16:42.12:0,42,480	1/1:3,23:26:69.03:631,69,0	0/0:11,0:11:33.10:0,33,381	0/0:6,0:6:18.05:0,18,208	0/0:11,0:11:30.09:0,30,346	0/0:6,0:6:18.05:0,18,208	0/0:5,0:5:15.04:0,15,173	0/0:7,0:7:12.04:0,12,138	0/0:9,0:9:24.07:0,24,277	0/0:10,0:10:24.07:0,24,277	0/0:22,0:22:60.15:0,60,679	0/0:19,0:19:54.16:0,54,620	0/0:19,1:20:26.69:0,27,561	0/0:8,0:8:24.07:0,24,277	0/0:17,0:17:48.11:0,48,535	0/0:1,0:1:3.01:0,3,35	0/0:4,0:4:9.03:0,9,104	0/0:9,0:9:24.07:0,24,277	0/0:14,0:14:33.10:0,33,381	0/0:18,0:18:48.14:0,48,554	0/0:28,0:28:81.24:0,81,935	0/0:7,0:7:21.06:0,21,242
chr10	63951939	.	T	TA	943.30	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-6.440;DP=344;FS=0.774;HRun=1;HaplotypeScore=37.9297;InbreedingCoeff=0.8053;MQ=68.25;MQ0=0;MQRankSum=-0.451;QD=26.20;ReadPosRankSum=2.051;VQSLOD=3.5024;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,29:30:66.22:917,66,0	1/1:0,6:6:11.95:142,12,0	0/0:6,0:6:7.04:0,7,111	0/0:7,0:7:16.26:0,16,179	0/0:22,0:22:66.19:0,66,822	0/0:13,0:13:39.13:0,39,501	0/0:15,0:15:42.12:0,42,525	0/0:28,0:28:81.63:0,82,502	0/0:11,0:11:33.11:0,33,425	0/0:6,0:6:18.06:0,18,233	0/0:10,0:10:30.10:0,30,385	0/0:6,0:6:18.06:0,18,227	0/0:5,0:5:15.05:0,15,193	0/0:7,0:7:12.04:0,12,154	0/0:8,0:8:21.07:0,21,270	0/0:8,0:8:24.08:0,24,309	0/0:20,0:20:57.19:0,57,735	0/0:18,0:18:54.18:0,54,695	0/0:19,0:19:57.05:0,57,677	0/0:9,0:9:24.08:0,24,309	0/0:14,0:14:42.14:0,42,542	0/0:1,0:1:3.01:0,3,39	0/0:3,0:3:9.03:0,9,116	0/0:8,0:8:24.08:0,24,308	0/0:12,0:12:36.11:0,36,450	0/0:16,0:16:48.16:0,48,620	0/0:29,0:29:84.26:0,84,1069	0/0:7,0:7:21.07:0,21,271
chr10	63951969	.	CACATATATGTATATAT	C	542.08	PASS	AC=2;AF=0.037;AN=54;BaseQRankSum=0.632;DP=315;FS=3.402;HRun=0;HaplotypeScore=127.7094;InbreedingCoeff=0.5945;MQ=65.04;MQ0=6;MQRankSum=-3.191;QD=28.53;ReadPosRankSum=-3.198;VQSLOD=1.7852;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:36.11:0,36,1885	0/0:6,0:6:12.04:0,12,914	0/0:6,0:4:3.01:0,3,44	0/0:5,0:3:4.57:0,5,59	0/0:19,0:19:42.14:0,42,2921	0/0:11,0:11:21.07:0,21,1488	0/0:13,0:13:18.06:0,18,919	1/1:15,4:19:21.06:634,21,0	0/0:12,0:12:15.05:0,15,867	0/0:10,0:9:24.08:0,24,1518	0/0:11,0:11:21.07:0,21,1505	0/0:6,0:6:18.06:0,18,1282	0/0:5,0:5:15.05:0,15,949	0/0:4,0:4:9.03:0,9,692	0/0:6,0:6:15.05:0,15,859	0/0:7,0:6:18.06:0,18,1371	0/0:16,0:16:39.12:0,39,2271	0/0:14,0:14:33.11:0,33,1955	0/0:21,0:19:36.12:0,36,1745	0/0:7,0:7:12.04:0,12,821	0/0:5,0:5:12.04:0,12,711	./.	0/0:4,0:4:9.03:0,9,532	0/0:10,0:10:12.03:0,12,702	0/0:18,0:18:33.09:0,33,2181	0/0:18,0:18:39.12:0,39,2207	0/0:26,0:26:63.22:0,63,3729	0/0:8,0:8:21.07:0,21,993
chr10	63953148	.	T	TA	9403.79	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-12.079;DP=494;FS=1.349;HRun=8;HaplotypeScore=55.9487;InbreedingCoeff=0.9602;MQ=85.96;MQ0=2;MQRankSum=-1.595;QD=27.34;ReadPosRankSum=2.853;VQSLOD=5.5086;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:69.02:0,69,627	0/0:6,0:6:18.01:0,18,165	0/0:29,1:25:6.20:0,6,106	0/0:22,0:18:9.88:0,10,82	0/0:22,0:22:65.99:0,66,593	1/1:2,20:22:57.17:660,57,0	1/1:1,5:6:15.04:174,15,0	1/1:7,23:30:44.86:751,45,0	1/1:3,10:13:21.06:243,21,0	1/1:1,18:20:59.97:631,60,0	1/1:2,13:15:38.94:410,39,0	1/1:0,13:13:27.08:313,27,0	0/0:17,0:17:35.97:0,36,322	1/1:0,7:7:15.04:174,15,0	1/1:3,14:17:32.57:411,33,0	1/1:4,11:15:30.09:347,30,0	1/1:1,28:29:75.22:867,75,0	1/1:2,20:22:51.11:575,51,0	1/1:3,17:20:57.10:622,57,0	1/1:3,20:23:60.18:695,60,0	1/1:0,7:7:15.04:174,15,0	0/0:10,0:10:27:0,27,240	0/0:12,0:12:36.01:0,36,326	0/0:4,0:4:11.96:0,12,101	1/1:0,29:29:69.21:799,69,0	1/1:2,22:24:66.20:764,66,0	1/1:5,20:25:51.15:589,51,0	1/1:0,7:7:18.05:208,18,0
chr10	63955140	.	CT	C	16116.80	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=10.742;DP=671;FS=2.608;HRun=2;HaplotypeScore=66.2991;InbreedingCoeff=0.9986;MQ=83.03;MQ0=0;MQRankSum=-3.877;QD=34.66;ReadPosRankSum=2.856;VQSLOD=5.4300;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,111,1602	0/0:7,0:7:21.07:0,21,315	0/0:17,0:17:47.56:0,48,560	0/0:22,0:22:65.93:0,66,806	0/0:19,0:19:57.19:0,57,852	1/1:0,23:23:57.19:740,57,0	1/1:0,33:33:87.28:1129,87,0	1/1:1,21:22:63.16:786,63,0	1/1:2,21:23:63.20:813,63,0	1/1:1,26:27:78.20:980,78,0	1/1:0,11:11:30.10:389,30,0	1/1:0,21:21:54.18:701,54,0	0/0:32,0:32:96.31:0,96,1402	1/1:1,27:28:69.22:893,69,0	1/1:0,32:32:90.29:1168,90,0	1/1:0,19:19:51.17:662,51,0	1/1:0,30:30:87.28:1129,87,0	1/1:1,24:25:63.20:816,63,0	1/1:1,17:18:51.13:632,51,0	1/1:0,12:12:21.07:272,21,0	1/1:1,35:36:93.30:1207,93,0	0/0:29,0:29:78.26:0,78,1168	0/0:15,0:15:45.15:0,45,674	0/0:28,0:28:84.25:0,84,1216	1/1:1,21:22:54.18:701,54,0	1/1:0,33:33:99:1270,99,0	1/1:1,33:34:93.30:1205,93,0	1/1:0,16:16:48.16:622,48,0
chr10	63955893	.	CGCATCCT	C	13848.59	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=13.702;DP=410;FS=2.580;HRun=0;HaplotypeScore=141.5612;InbreedingCoeff=0.9678;MQ=66.96;MQ0=0;MQRankSum=-13.942;QD=48.59;ReadPosRankSum=0.046;VQSLOD=4.7499;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:66.21:0,66,2098	0/0:6,0:6:10.02:0,10,560	0/0:9,0:9:20.39:0,20,708	0/0:8,0:8:20.72:0,21,591	0/0:14,0:14:36.12:0,36,1337	1/1:2,5:7:15.05:373,15,0	1/1:8,22:30:63.22:1570,63,0	1/1:2,10:12:30.02:656,30,0	1/1:2,8:10:24.08:598,24,0	1/1:1,12:13:36.12:897,36,0	1/1:2,5:7:9.03:223,9,0	1/1:2,18:20:48.16:1195,48,0	0/0:14,0:14:42.14:0,42,1628	1/1:0,17:17:51.18:1271,51,0	1/1:2,7:9:21.07:523,21,0	1/1:1,6:7:18.06:447,18,0	1/1:6,10:16:21.03:469,21,0	1/1:6,11:17:27.09:669,27,0	1/1:12,15:27:45.14:1072,45,0	1/1:1,7:8:15.05:348,15,0	1/1:9,21:30:27.09:671,27,0	0/0:7,0:7:21.07:0,21,819	0/0:12,0:12:36.12:0,36,1400	0/0:32,0:32:90.31:0,90,3459	1/1:2,16:18:42.14:1046,42,0	1/1:4,14:18:42.13:997,42,0	1/1:1,4:5:12.04:299,12,0	1/1:4,10:14:20.81:523,21,0
chr10	63957118	.	TC	T	1520.88	PASS	AC=30;AF=0.600;AN=50;BaseQRankSum=3.368;DP=324;FS=2.202;HRun=4;HaplotypeScore=35.7183;InbreedingCoeff=0.7849;MQ=68.09;MQ0=3;MQRankSum=-0.267;QD=10.71;ReadPosRankSum=0.194;VQSLOD=0.6985;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:63.34:0,63,398	0/0:6,0:6:7.78:0,8,48	0/0:40,0:10:29.40:0,29,217	0/0:35,0:13:8.38:0,8,121	0/0:8,0:8:13.19:0,13,95	./.	1/1:10,2:12:20.54:140,21,0	1/1:8,0:8:14.98:129,15,0	1/1:5,0:5:5.95:44,6,0	1/1:11,0:10:11.93:96,12,0	./.	1/1:7,1:8:14.89:122,15,0	0/0:6,0:6:14.97:0,15,123	./.	1/1:15,0:15:29.52:194,30,0	0/0:1,8:9:0:0,0,0	1/1:18,0:18:35.57:240,36,0	1/1:0,6:6:2.80:13,3,0	1/1:14,0:13:20.93:166,21,0	1/1:3,0:4:3:25,3,0	1/1:8,0:8:17.89:132,18,0	0/0:4,0:4:5.99:0,6,51	0/0:7,0:7:5.95:0,6,43	0/0:10,0:10:8.93:0,9,64	1/1:6,0:6:5.99:50,6,0	1/1:9,1:9:17.61:136,18,0	1/1:13,0:13:20.75:143,21,0	1/1:4,0:4:8.97:71,9,0
chr10	63958990	.	C	CAGCGCCG	20261.31	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-2.534;DP=388;FS=32.272;HRun=0;HaplotypeScore=87.1804;InbreedingCoeff=0.9572;MQ=70.92;MQ0=0;MQRankSum=-12.891;QD=77.04;ReadPosRankSum=0.693;VQSLOD=3.0566;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,99,2460	0/0:2,0:2:6.02:0,6,120	0/0:11,0:11:26.96:0,27,577	0/0:10,0:10:30.10:0,30,712	0/0:8,0:8:24.07:0,24,528	1/1:3,11:18:33.11:1271,33,0	1/1:6,13:27:54.18:2041,54,0	1/1:1,5:11:30.10:1077,30,0	1/1:1,11:13:30.10:1105,30,0	1/1:1,5:8:23.93:664,24,0	1/1:3,5:8:18.05:615,18,0	1/1:1,12:17:35.81:1397,36,0	0/0:9,0:9:24.08:0,24,623	1/1:6,3:11:18.06:702,18,0	1/1:0,19:20:48.16:1900,48,0	1/1:2,13:16:45.15:1695,45,0	1/1:3,9:18:33.11:1299,33,0	1/1:2,7:11:21.07:836,21,0	1/1:5,1:10:27.05:885,27,0	1/1:2,1:6:6.02:151,6,0	1/1:4,4:14:15:512,15,0	0/0:10,0:10:30.07:0,30,646	0/0:12,0:12:33.11:0,33,843	0/0:29,0:28:81.28:0,81,2028	1/1:5,12:19:42.14:1481,42,0	1/1:1,6:11:32.95:964,33,0	1/1:0,13:20:26.65:1071,27,0	1/1:0,5:5:15.05:597,15,0
chr10	63959511	.	C	CGT	1134.24	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-4.337;DP=898;FS=18.505;HRun=0;HaplotypeScore=163.1174;InbreedingCoeff=0.9970;MQ=68.47;MQ0=0;MQRankSum=0.664;QD=26.38;ReadPosRankSum=-4.188;VQSLOD=2.4799;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:65,0:65:99:0,168,2045	0/0:12,0:12:36.11:0,36,450	0/0:27,0:25:45.11:0,45,521	0/0:31,0:29:38.96:0,39,544	0/0:23,0:24:44.89:0,45,519	0/0:26,0:26:60.13:0,60,708	0/0:35,0:35:96.30:0,96,1199	1/1:17,25:43:45.01:1229,45,0	0/0:31,0:31:87.28:0,87,1087	0/0:45,0:45:99:0,105,1301	0/0:18,0:18:39.08:0,39,469	0/0:31,0:32:84.05:0,84,997	0/0:36,0:36:84.09:0,84,1022	0/0:33,0:33:78.24:0,78,963	0/0:34,0:34:84.24:0,84,1026	0/0:26,0:27:69.05:0,69,839	0/0:39,0:39:81.32:0,81,1211	0/0:32,0:33:93.13:0,93,1139	0/0:15,0:15:30.07:0,30,360	0/0:19,0:19:39.03:0,39,447	0/0:65,0:68:99:0,165,2007	0/0:22,0:22:42.12:0,42,513	0/0:18,0:18:23.86:0,24,257	0/0:50,0:50:99:0,132,1623	0/0:15,0:16:47.91:0,48,542	0/0:40,0:40:96.16:0,96,1130	0/0:35,0:35:87.27:0,87,1087	0/0:24,0:24:60.19:0,60,749
chr10	63959887	.	TC	T	6869.98	PASS	AB=0.896;AC=50;AF=0.962;AN=52;BaseQRankSum=2.382;DP=254;FS=5.726;HRun=4;HaplotypeScore=154.1758;InbreedingCoeff=-0.0501;MQ=71.43;MQ0=0;MQRankSum=-4.655;QD=27.15;ReadPosRankSum=3.238;VQSLOD=3.1095;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,4:4:9.03:107,9,0	1/1:0,1:1:3.01:36,3,0	0/1:6,1:6:21.99:22,0,69	0/1:10,1:11:30.16:30,0,98	1/1:3,19:22:48.08:553,48,0	1/1:0,19:19:54.17:643,54,0	1/1:1,6:7:18.02:199,18,0	1/1:4,5:9:21.01:225,21,0	1/1:1,7:8:21.06:250,21,0	1/1:1,12:13:36.11:430,36,0	1/1:0,14:14:32.95:343,33,0	1/1:1,12:13:36.11:428,36,0	1/1:2,7:9:21.06:250,21,0	1/1:1,4:5:12.04:143,12,0	1/1:1,10:11:27.04:306,27,0	1/1:0,10:10:30.09:357,30,0	1/1:0,5:5:12.04:143,12,0	./.	1/1:0,8:8:24.07:287,24,0	1/1:1,10:11:26.96:287,27,0	./.	1/1:1,14:15:38.92:398,39,0	1/1:0,8:8:23.96:252,24,0	1/1:1,6:7:15.05:178,15,0	1/1:0,7:7:14.98:161,15,0	1/1:0,8:8:24.03:271,24,0	1/1:4,13:17:36.11:429,36,0	1/1:0,4:4:12.04:143,12,0
chr10	63959894	.	AC	A	7216.43	PASS	AB=0.739;AC=50;AF=0.962;AN=52;BaseQRankSum=1.091;DP=246;FS=4.814;HRun=3;HaplotypeScore=145.7628;InbreedingCoeff=0.0003;MQ=58.58;MQ0=0;MQRankSum=-3.750;QD=29.45;ReadPosRankSum=1.777;VQSLOD=4.0098;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,3:4:9.03:111,9,0	1/1:0,1:1:3.01:37,3,0	0/1:2,1:2:18.72:19,0,24	0/1:5,1:8:11.55:12,0,63	1/1:0,19:19:48.15:592,48,0	1/1:2,18:20:51.16:629,51,0	1/1:0,7:7:18.06:222,18,0	1/1:0,6:6:18.06:221,18,0	1/1:1,7:8:21.07:259,21,0	1/1:0,12:12:36.11:445,36,0	1/1:2,13:15:33.10:407,33,0	1/1:1,11:12:33.10:407,33,0	1/1:3,5:8:15.04:185,15,0	1/1:2,5:7:12.04:148,12,0	1/1:2,9:11:27.08:333,27,0	1/1:0,11:11:30.09:370,30,0	1/1:0,6:6:12.04:148,12,0	./.	1/1:0,8:8:24.08:297,24,0	1/1:0,10:10:27.08:333,27,0	./.	1/1:2,14:16:39.12:481,39,0	1/1:0,9:9:24.08:296,24,0	1/1:1,6:7:12.04:148,12,0	1/1:1,8:9:18.02:206,18,0	1/1:0,9:9:27.04:316,27,0	1/1:2,13:15:36.11:445,36,0	1/1:0,4:4:12.04:148,12,0
chr10	63959998	.	TCC	T	2004.60	PASS	AB=0.737;AC=35;AF=0.625;AN=56;BaseQRankSum=0.816;DP=277;FS=2.627;HRun=12;HaplotypeScore=52.2669;InbreedingCoeff=0.6347;MQ=90.10;MQ0=1;MQRankSum=-0.849;QD=10.50;ReadPosRankSum=3.293;VQSLOD=1.3017;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:21:0,21,228	0/0:3,0:4:2.45:0,2,25	0/0:18,0:17:20.70:0,21,255	0/0:22,0:15:11.68:0,12,209	1/1:2,0:12:16.45:71,16,0	1/1:2,4:6:9:92,9,0	1/1:3,6:9:18.04:183,18,0	1/1:11,0:13:5.41:24,5,0	1/1:10,7:17:20.83:212,21,0	0/0:2,1:3:0:0,0,0	1/1:8,5:13:8.93:91,9,0	1/1:4,3:7:8.98:91,9,0	0/0:7,0:8:20.54:0,21,247	0/1:9,5:14:4.54:134,0,5	1/1:5,9:14:14.94:152,15,0	1/1:5,10:15:1.16:218,1,0	1/1:3,10:13:23.98:243,24,0	1/1:3,2:5:5.97:61,6,0	1/1:5,4:9:11.99:122,12,0	1/1:4,2:6:2.98:31,3,0	1/1:6,6:12:21.01:214,21,0	0/0:4,0:5:3:0,3,25	0/0:3,0:3:3.01:0,3,45	0/0:8,0:8:15.04:0,15,203	1/1:3,3:6:8.97:90,9,0	1/1:8,4:12:8.93:91,9,0	1/1:5,3:8:5.92:61,6,0	0/0:3,0:3:0:0,0,0
chr10	63961551	.	TCAA	T	606.38	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-3.184;DP=343;FS=2.210;HRun=0;HaplotypeScore=80.6920;InbreedingCoeff=0.8950;MQ=63.94;MQ0=1;MQRankSum=-1.437;QD=28.88;ReadPosRankSum=2.576;VQSLOD=3.7788;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,16:17:36.08:596,36,0	1/1:0,4:4:8.97:124,9,0	0/0:13,0:5:11.93:0,12,103	0/0:15,0:9:19.66:0,20,232	0/0:11,0:11:30.82:0,31,197	0/0:15,0:15:33:0,33,512	0/0:10,0:10:24:0,24,348	0/0:18,0:18:54.07:0,54,589	0/0:10,0:10:18:0,18,213	0/0:11,0:11:33.07:0,33,420	0/0:10,0:10:24.89:0,25,390	0/0:8,0:8:15:0,15,155	0/0:14,0:14:42.09:0,42,724	0/0:9,0:9:15.01:0,15,182	0/0:17,0:17:34.55:0,35,350	0/0:12,0:12:20.99:0,21,304	0/0:19,0:19:29.80:0,30,381	0/0:18,0:18:39.04:0,39,559	0/0:13,0:13:39.07:0,39,531	0/0:11,0:11:28.47:0,28,251	0/0:11,0:11:25.66:0,26,299	0/0:3,0:3:9.03:0,9,181	0/0:7,0:7:20.94:0,21,295	0/0:10,0:10:30.08:0,30,519	0/0:10,0:10:26.98:0,27,342	0/0:11,0:11:32.99:0,33,413	0/0:20,0:20:35.95:0,36,362	0/0:16,0:16:44.72:0,45,672
chr10	63961552	.	C	CAAA	2841.36	PASS	AB=0.863;AC=38;AF=0.679;AN=56;BaseQRankSum=1.532;DP=402;FS=0.672;HRun=14;HaplotypeScore=105.1040;InbreedingCoeff=0.6151;MQ=62.05;MQ0=1;MQRankSum=-2.118;QD=8.72;ReadPosRankSum=-3.164;VQSLOD=-0.0035;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:19.08:0,19,177	0/1:4,0:4:6.83:7,0,13	0/0:14,0:6:6.83:0,7,48	0/1:15,0:10:1.97:2,0,25	0/0:3,0:11:16.57:0,17,127	1/1:3,1:14:19.20:168,19,0	1/1:3,0:10:11.95:91,12,0	1/1:15,6:24:36.06:503,36,0	1/1:5,1:12:9.01:111,9,0	1/1:9,0:18:24.74:240,25,0	1/1:5,0:15:24.17:152,24,0	1/1:6,0:10:8.91:62,9,0	0/0:12,0:13:2.85:0,3,201	1/1:5,0:10:6:57,6,0	1/1:13,0:24:23.92:215,24,0	1/1:5,1:16:20.93:183,21,0	1/1:10,0:23:14.19:125,14,0	1/1:9,0:24:20.84:184,21,0	1/1:11,1:15:26.54:244,27,0	1/1:9,1:13:8.92:76,9,0	0/1:9,0:11:0.10:19,0,0	0/0:4,0:4:5.85:0,6,61	0/0:6,0:6:5.63:0,6,61	0/0:9,0:9:11.56:0,12,123	1/1:6,0:15:9.44:69,9,0	1/1:4,0:14:26.55:239,27,0	1/1:12,0:22:13.23:119,13,0	0/1:8,2:16:9.08:159,0,9
chr10	63961756	.	GTAA	G	2433.37	PASS	AC=32;AF=0.762;AN=42;BaseQRankSum=2.771;DP=195;FS=2.897;HRun=0;HaplotypeScore=30.5276;InbreedingCoeff=0.6945;MQ=59.89;MQ0=0;MQRankSum=-1.530;QD=19.31;ReadPosRankSum=1.039;VQSLOD=3.0280;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,11:15:24.06:310,24,0	./.	./.	./.	1/1:2,4:6:6.02:82,6,0	1/1:4,5:9:9.03:123,9,0	1/1:3,0:3:6:64,6,0	0/0:17,0:23:18.81:0,19,149	1/1:2,0:2:3:25,3,0	1/1:0,5:5:15.04:189,15,0	1/1:1,3:4:3.01:41,3,0	./.	0/0:2,0:2:3.01:0,3,59	1/1:2,3:5:9.03:123,9,0	1/1:0,9:9:18.06:246,18,0	0/0:8,0:8:15.04:0,15,254	0/0:19,0:19:46.40:0,46,847	1/1:5,8:13:15.05:205,15,0	1/1:11,8:19:24.05:309,24,0	1/1:0,3:3:6.02:82,6,0	./.	./.	./.	0/0:1,0:1:3.01:0,3,59	1/1:2,6:7:15.05:205,15,0	1/1:1,3:4:9.03:123,9,0	1/1:5,5:10:12.04:164,12,0	1/1:4,7:11:21.07:287,21,0
chr10	63962084	.	AAAAT	A	14209.65	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=10.452;DP=514;FS=3.373;HRun=0;HaplotypeScore=91.9552;InbreedingCoeff=0.9482;MQ=87.32;MQ0=0;MQRankSum=-5.482;QD=39.47;ReadPosRankSum=3.947;VQSLOD=5.0905;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:90.31:0,90,2289	0/0:2,0:2:3.01:0,3,77	0/0:25,0:25:62.24:0,62,1403	0/0:13,0:13:35.32:0,35,813	0/0:13,0:13:30.10:0,30,739	1/1:4,14:18:36.12:636,36,0	1/1:4,23:27:63.22:1105,63,0	1/1:5,18:23:54.18:922,54,0	1/1:1,17:18:42.09:708,42,0	1/1:4,15:19:45.15:795,45,0	1/1:0,6:6:12.04:212,12,0	1/1:2,15:17:36.12:625,36,0	0/0:27,0:27:75.26:0,75,1866	1/1:3,15:18:39.13:685,39,0	1/1:3,13:16:30.10:530,30,0	1/1:2,15:17:39.13:689,39,0	1/1:2,24:26:63.01:1112,63,0	1/1:2,15:17:33.11:583,33,0	1/1:4,13:17:39.12:656,39,0	1/1:0,11:11:30.06:485,30,0	1/1:6,47:53:99:1953,109,0	0/0:11,0:11:33.11:0,33,843	0/0:3,0:3:6.02:0,6,154	0/0:25,0:25:75.25:0,75,1873	1/1:1,10:10:24.08:424,24,0	1/1:4,26:30:81.26:1403,81,0	1/1:0,9:9:21.07:369,21,0	1/1:1,6:7:18.06:318,18,0
chr10	63965334	.	A	AT	9465.30	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-5.938;DP=601;FS=3.682;HRun=9;HaplotypeScore=91.1989;InbreedingCoeff=0.9937;MQ=79.26;MQ0=0;MQRankSum=-4.661;QD=19.56;ReadPosRankSum=-1.406;VQSLOD=4.6094;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,22:29:27.95:499,28,0	1/1:2,8:10:18.44:167,18,0	0/0:17,0:17:35.91:0,36,302	0/0:16,0:17:17.30:0,17,195	1/1:5,15:20:46.06:493,46,0	1/1:3,13:16:36.05:384,36,0	1/1:11,15:26:47.87:452,48,0	1/1:8,21:29:34.06:579,34,0	1/1:6,16:22:44.83:423,45,0	1/1:8,13:21:44.98:450,45,0	1/1:2,8:10:23.96:248,24,0	1/1:10,6:16:33:317,33,0	0/0:18,0:18:19.42:0,19,293	1/1:4,19:23:47.84:503,48,0	1/1:10,27:37:42.99:655,43,0	1/1:4,19:23:36.06:386,36,0	1/1:14,35:49:58.15:860,58,0	1/1:3,20:24:35.93:379,36,0	1/1:5,7:13:24.04:254,24,0	1/1:9,12:21:35.94:345,36,0	1/1:7,16:24:41.95:446,42,0	0/0:13,0:13:29.97:0,30,260	0/0:15,0:15:29.98:0,30,260	0/0:37,0:37:80.85:0,81,692	1/1:3,7:10:26.99:272,27,0	1/1:8,11:18:41.99:417,42,0	1/1:8,19:27:45.04:474,45,0	1/1:1,13:14:42.11:463,42,0
chr10	63965343	.	T	TA	1784.86	PASS	AB=0.963;AC=29;AF=0.518;AN=56;BaseQRankSum=9.285;DP=564;FS=6.208;HRun=0;HaplotypeScore=88.2544;InbreedingCoeff=-0.0242;MQ=78.13;MQ0=0;MQRankSum=-2.285;QD=3.98;ReadPosRankSum=5.377;VQSLOD=2.0475;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:25:22.46:86,0,22	1/1:9,0:10:7.73:62,8,0	0/0:16,0:16:36.12:0,36,454	0/0:16,0:16:29.84:0,30,345	1/1:17,0:17:26.43:102,26,0	0/1:20,0:20:40.44:40,0,71	0/1:21,1:22:13.31:74,0,13	0/1:26,0:26:90.18:117,0,90	0/1:19,2:21:12.96:118,0,13	0/1:20,0:21:46.17:98,0,46	1/1:9,1:10:3.42:109,3,0	0/1:9,4:16:0.03:149,0,0	0/0:17,2:19:12.51:0,13,499	1/1:21,0:21:21.35:85,21,0	0/1:35,0:35:33.30:132,0,33	0/1:22,0:22:3.72:62,0,4	0/1:45,0:45:20.99:164,0,21	0/1:21,0:21:5.34:51,0,5	1/1:10,0:10:7.26:36,7,0	0/1:17,0:17:19.83:25,0,20	0/1:24,0:24:23.92:69,0,24	0/0:13,0:13:20.99:0,21,396	0/0:13,0:13:32.54:0,33,439	0/0:39,0:39:84.81:0,85,1202	0/1:11,1:12:9.38:48,0,9	0/1:15,0:14:7.17:41,0,7	1/1:22,0:22:35.57:135,36,0	1/1:14,0:15:35.40:161,35,0
chr10	63967097	.	TG	T	1099.21	PASS	AB=0.602;AC=23;AF=0.605;AN=38;BaseQRankSum=-0.711;DP=84;FS=2.628;HRun=6;HaplotypeScore=50.1066;InbreedingCoeff=0.3812;MQ=98.89;MQ0=0;MQRankSum=-2.703;QD=20.74;ReadPosRankSum=2.703;VQSLOD=3.0042;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	0/1:1,1:2:26.19:26,0,33	0/0:6,0:6:9.02:0,9,105	0/0:7,0:7:4.28:0,4,65	0/0:3,0:3:6.02:0,6,79	1/1:0,5:5:15.04:160,15,0	0/1:2,4:6:10.79:108,0,11	1/1:0,4:4:12.03:129,12,0	1/1:2,2:4:6.02:65,6,0	1/1:0,2:2:6.02:64,6,0	1/1:1,5:6:15.04:161,15,0	1/1:3,2:5:6.01:64,6,0	0/0:4,0:4:7.26:0,7,76	1/1:1,1:2:3.01:31,3,0	0/1:1,6:7:9.77:172,0,10	1/1:0,4:4:12.03:128,12,0	./.	./.	./.	./.	1/1:0,1:1:3.01:32,3,0	0/0:2,0:2:3.01:0,3,38	./.	0/0:2,0:2:5.95:0,6,57	./.	./.	1/1:2,3:5:10.58:98,11,0	./.
chr10	63967992	.	GAA	G	4792.69	PASS	AB=0.668;AC=35;AF=0.625;AN=56;BaseQRankSum=1.510;DP=486;FS=12.633;HRun=9;HaplotypeScore=71.1908;InbreedingCoeff=0.6788;MQ=46.83;MQ0=31;MQRankSum=-5.372;QD=15.82;ReadPosRankSum=2.456;VQSLOD=1.7796;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:23:40.61:0,41,161	0/0:6,0:7:7.49:0,7,26	0/0:24,1:3:3.01:0,3,39	0/0:24,0:5:0.23:0,0,25	0/0:3,0:24:27.55:0,28,98	1/1:5,8:12:10.75:200,11,0	1/1:9,6:15:8.20:173,8,0	1/1:8,6:12:18.51:210,19,0	1/1:4,7:11:12.02:140,12,0	1/1:11,3:13:20.82:203,21,0	1/1:4,10:13:18.05:210,18,0	1/1:10,3:12:5.34:97,5,0	0/0:15,0:15:36.12:0,36,580	1/1:7,6:13:26.77:267,27,0	1/1:11,9:20:15.45:398,15,0	1/1:10,11:21:40.73:406,41,0	1/1:17,13:29:26.21:533,26,0	1/1:10,7:17:33.24:356,33,0	1/1:6,10:15:36.09:416,36,0	1/1:7,7:11:24.06:276,24,0	0/1:4,6:9:3.63:29,0,4	0/0:16,0:16:25.90:0,26,387	0/0:15,0:15:39.09:0,39,605	0/0:31,0:29:69.24:0,69,1125	1/1:6,13:19:7.99:260,8,0	0/1:9,11:18:10.10:367,0,10	0/1:14,8:20:4.48:185,0,4	1/1:4,2:4:8.59:67,9,0
chr10	63968000	.	AAG	A	2313.23	PASS	AB=0.983;AC=27;AF=0.482;AN=56;BaseQRankSum=7.421;DP=549;FS=56.522;HRun=0;HaplotypeScore=99.6074;InbreedingCoeff=-0.3295;MQ=52.95;MQ0=29;MQRankSum=-4.089;QD=5.21;ReadPosRankSum=4.284;VQSLOD=0.5443;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:23:2.04:2,0,141	0/1:7,0:5:12.62:13,0,40	0/1:33,0:6:5.81:6,0,74	0/1:34,0:11:3.89:4,0,48	0/0:29,0:29:39.12:0,39,323	1/1:13,0:12:1.62:105,2,0	1/1:10,1:11:22.61:177,23,0	0/1:21,0:18:57.31:57,0,185	0/1:10,0:10:20.06:57,0,20	0/1:13,0:13:45.68:46,0,70	0/1:14,1:14:21.56:79,0,22	1/1:13,1:13:2.96:61,3,0	0/0:16,0:16:42.03:0,42,530	0/1:14,1:15:16.54:143,0,17	0/1:24,0:24:8.16:212,0,8	0/1:22,1:23:44.08:194,0,44	0/1:32,1:32:11.52:267,0,12	0/1:17,3:20:1.80:221,0,2	0/1:24,0:23:67.08:166,0,67	0/1:20,0:17:16.88:145,0,17	1/1:10,0:9:7.72:59,8,0	0/0:13,0:13:5.49:0,5,380	0/0:15,0:15:42.04:0,42,596	0/0:32,0:30:83.74:0,84,1137	0/1:20,0:20:54.70:95,0,55	0/1:19,0:19:64.82:184,0,65	0/1:30,0:28:71.22:156,0,71	0/1:12,0:10:24.85:25,0,94
chr10	63968007	.	G	GA	3786.12	PASS	AB=0.799;AC=37;AF=0.661;AN=56;BaseQRankSum=2.638;DP=568;FS=2.481;HRun=14;HaplotypeScore=99.7087;InbreedingCoeff=0.4219;MQ=54.26;MQ0=26;MQRankSum=-3.774;QD=9.19;ReadPosRankSum=-3.228;VQSLOD=2.2782;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:57.05:0,57,366	0/0:7,0:6:5.41:0,5,37	0/0:41,0:8:11.41:0,11,90	0/1:34,0:11:0.39:0,0,43	0/0:26,1:29:30.12:0,30,288	1/1:7,5:12:3.67:134,4,0	1/1:7,2:9:3.09:80,3,0	0/0:8,0:21:28.54:0,29,94	0/1:6,5:11:1.24:100,0,1	1/1:8,4:13:15.91:128,16,0	1/1:11,5:15:10.44:193,10,0	1/1:9,4:13:7.44:113,7,0	0/1:13,4:18:12.53:13,0,171	1/1:10,6:16:7.56:176,8,0	1/1:17,13:30:57.19:555,57,0	1/1:13,11:24:11.57:223,12,0	1/1:22,8:30:16.54:315,17,0	1/1:8,13:22:28.58:223,29,0	1/1:17,10:26:15.34:365,15,0	0/1:7,10:16:5.61:180,0,6	1/1:7,0:7:7.82:35,8,0	0/1:13,1:14:13.11:13,0,49	0/1:12,3:15:48.97:49,0,101	0/0:33,0:31:62:0,62,402	0/1:11,9:20:21.32:179,0,21	1/1:12,5:18:11.68:191,12,0	1/1:23,8:30:43.21:358,43,0	1/1:6,5:10:20.76:163,21,0
chr10	63968905	.	G	GGT	4323.84	PASS	AB=1.000;AC=37;AF=0.661;AN=56;BaseQRankSum=4.511;DP=568;FS=1.523;HRun=0;HaplotypeScore=80.2210;InbreedingCoeff=0.7791;MQ=62.53;MQ0=26;MQRankSum=0.782;QD=13.95;ReadPosRankSum=1.321;VQSLOD=4.8050;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:32:69.14:0,69,841	0/1:6,0:6:4.95:5,0,136	0/0:42,0:19:51.06:0,51,602	0/0:36,0:14:33.04:0,33,365	0/0:17,0:17:51.04:0,51,592	1/1:5,15:19:9.03:152,9,0	1/1:8,23:32:7.61:177,8,0	0/0:23,0:22:15.19:0,15,315	1/1:15,2:16:42.13:638,42,0	1/1:15,0:13:30.09:445,30,0	1/1:5,10:15:15.05:216,15,0	1/1:1,14:15:3.01:51,3,0	0/0:20,0:19:42:0,42,489	1/1:3,10:13:3.01:51,3,0	1/1:5,12:15:15.02:223,15,0	1/1:8,11:19:14.99:184,15,0	1/1:4,9:14:6.02:100,6,0	1/1:9,2:10:25.64:379,26,0	1/1:9,6:11:21.07:321,21,0	1/1:9,10:19:24.53:299,25,0	1/1:13,13:23:9.03:141,9,0	0/0:24,0:23:65.42:0,65,805	0/0:18,0:17:39.12:0,39,492	0/0:43,0:41:99:0,102,1190	1/1:3,10:13:6.02:101,6,0	1/1:5,16:21:12.70:690,13,0	1/1:1,10:14:6.02:102,6,0	1/1:3,0:4:2.95:51,3,0
chr10	63972228	.	T	TACAC	1782.98	PASS	AB=0.883;AC=32;AF=0.667;AN=48;BaseQRankSum=-1.710;DP=445;FS=3.793;HRun=0;HaplotypeScore=90.2967;InbreedingCoeff=0.3129;MQ=60.27;MQ0=0;MQRankSum=0.671;QD=5.87;ReadPosRankSum=-1.597;VQSLOD=1.3336;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:29:3:0,3,28	0/0:2,0:5:6.01:0,6,56	./.	./.	./.	1/1:8,8:20:2.65:69,3,0	0/1:22,0:27:6.11:6,0,31	./.	1/1:8,2:11:5.69:82,6,0	1/1:9,0:9:0.94:2,1,0	0/0:10,0:10:3:0,3,42	1/1:18,0:20:0.01:48,0,0	0/1:9,0:9:0:0,0,0	1/1:14,0:14:11.98:225,12,0	1/1:18,0:18:2.99:24,3,0	1/1:11,1:16:8.42:94,8,0	1/1:20,13:39:17.53:289,18,0	1/1:20,0:20:13.81:250,14,0	0/1:15,0:16:9.37:259,0,9	1/1:4,2:6:3.01:70,3,0	1/1:20,12:37:5.80:96,6,0	0/0:8,0:8:3.01:0,3,46	0/0:9,0:9:4.83:0,5,51	0/0:25,0:26:12.02:0,12,166	1/1:10,0:10:3.48:52,3,0	1/1:17,0:17:9.96:155,10,0	0/1:6,2:11:36.99:132,0,37	1/1:1,2:3:3.01:70,3,0
chr10	63972368	.	GC	G	12812.18	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=5.676;DP=584;FS=1.510;HRun=4;HaplotypeScore=60.0776;InbreedingCoeff=0.9941;MQ=80.43;MQ0=0;MQRankSum=-2.141;QD=31.48;ReadPosRankSum=1.228;VQSLOD=5.2981;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,105,1411	0/0:8,0:8:21.07:0,21,293	0/0:17,0:17:33.09:0,33,425	0/0:15,0:15:38.83:0,39,464	0/0:18,0:18:54.17:0,54,740	1/1:0,32:32:87.27:1044,87,0	1/1:1,30:31:78.24:936,78,0	1/1:4,17:20:48.14:576,48,0	1/1:1,13:14:39.12:468,39,0	1/1:0,15:15:42.05:474,42,0	1/1:0,11:11:27.08:324,27,0	1/1:0,18:18:51.16:612,51,0	0/0:17,0:17:45.15:0,45,630	1/1:0,22:22:60.18:720,60,0	1/1:0,16:16:42.13:502,42,0	1/1:0,12:12:33.10:396,33,0	1/1:0,31:31:90.28:1080,90,0	1/1:0,35:35:99:1188,99,0	1/1:1,22:23:63.19:754,63,0	1/1:2,10:12:27.08:323,27,0	1/1:1,42:43:99:1296,108,0	0/0:18,0:18:51.17:0,51,712	0/0:15,0:15:45.12:0,45,594	0/0:34,0:34:99:0,99,1360	1/1:1,15:15:39.12:468,39,0	1/1:2,30:32:78.24:935,78,0	1/1:2,16:18:48.15:576,48,0	1/1:1,4:5:12.04:144,12,0
chr10	63973166	.	TGCTAGTCA	T	25867.52	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=16.605;DP=770;FS=0.000;HRun=0;HaplotypeScore=225.2085;InbreedingCoeff=0.9885;MQ=82.39;MQ0=0;MQRankSum=-19.028;QD=53.23;ReadPosRankSum=2.891;VQSLOD=4.5874;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:56:99:0,154,6552	0/0:12,0:12:36.12:0,36,1507	0/0:31,0:31:87.30:0,87,3405	0/0:30,0:30:78.19:0,78,2781	0/0:33,0:33:99:0,99,3978	1/1:0,16:16:36.12:1017,36,0	1/1:3,30:33:69.24:1948,69,0	1/1:4,25:29:75.21:1871,75,0	1/1:0,21:21:36.12:1017,36,0	1/1:9,25:34:72.25:1996,72,0	1/1:3,15:18:17.15:460,17,0	1/1:3,29:32:72.25:2033,72,0	0/0:30,0:30:90.30:0,90,3670	1/1:1,28:29:72.25:2032,72,0	1/1:3,28:31:69.24:1949,69,0	1/1:2,30:32:72.72:2034,73,0	1/1:5,22:27:45.06:1206,45,0	1/1:2,14:16:30.06:777,30,0	1/1:6,25:31:72.20:1833,72,0	1/1:3,15:18:29.97:628,30,0	1/1:11,28:39:20.95:593,21,0	0/0:32,0:32:90.31:0,90,3838	0/0:14,0:14:39.13:0,39,1727	0/0:46,0:46:99:0,135,5724	1/1:3,14:17:33.11:932,33,0	1/1:4,26:30:72.23:1771,72,0	1/1:1,24:25:54.04:1515,54,0	1/1:1,7:8:9.03:254,9,0
chr10	63975261	.	TGG	T	7447	PASS	AB=0.864;AC=40;AF=0.714;AN=56;BaseQRankSum=1.878;DP=596;FS=6.748;HRun=2;HaplotypeScore=105.8503;InbreedingCoeff=0.6035;MQ=55.85;MQ0=21;MQRankSum=-8.053;QD=18.57;ReadPosRankSum=2.893;VQSLOD=2.6215;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:15,5:17:29.63:327,0,30	0/1:11,4:15:99:172,0,127	0/0:61,1:18:3.14:0,3,235	0/0:44,0:19:10.78:0,11,128	0/1:31,3:31:70.77:445,0,71	1/1:10,2:12:31.61:273,32,0	1/1:14,1:13:24.40:285,24,0	0/1:35,2:34:97.43:97,0,218	1/1:5,3:7:17.21:141,17,0	1/1:13,13:25:69.44:741,69,0	1/1:12,6:16:44.22:428,44,0	1/1:11,0:11:26.63:177,27,0	0/0:18,0:17:36.73:0,37,454	1/1:4,5:9:23.30:194,23,0	1/1:11,4:15:40.67:413,41,0	1/1:9,4:12:26.15:288,26,0	1/1:8,6:13:31.48:348,31,0	1/1:19,1:14:38.32:328,38,0	1/1:14,8:21:52.45:656,52,0	1/1:11,2:12:25.77:229,26,0	1/1:6,3:8:14.36:104,14,0	0/0:17,0:17:42.94:0,43,505	0/0:20,0:20:52.21:0,52,698	0/0:34,0:34:93.37:0,93,1057	1/1:14,5:17:34.12:325,34,0	1/1:17,7:21:56.22:553,56,0	1/1:17,3:19:48.96:440,49,0	1/1:22,5:21:56.40:483,56,0
chr10	63975705	.	TC	T	606.25	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.054;DP=623;FS=1.615;HRun=8;HaplotypeScore=64.0696;InbreedingCoeff=0.9954;MQ=84.19;MQ0=0;MQRankSum=-0.282;QD=20.91;ReadPosRankSum=-4.432;VQSLOD=2.0927;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:90.25:0,90,1065	0/0:13,0:13:39.11:0,39,459	0/0:23,0:22:48.54:0,49,482	0/0:20,1:21:35.87:0,36,356	0/0:26,0:26:75.19:0,75,864	0/0:23,0:23:60.16:0,60,701	0/0:30,0:30:76.03:0,76,848	1/1:3,26:29:77.94:701,78,0	0/0:20,0:20:57.15:0,57,661	0/0:23,0:23:63.17:0,63,736	0/0:14,0:14:33.02:0,33,379	0/0:25,0:25:57.16:0,57,677	0/0:20,0:20:54.16:0,54,646	0/0:18,0:18:45.14:0,45,537	0/0:26,0:26:78.23:0,78,932	0/0:24,0:24:66.17:0,66,773	0/0:25,0:25:60.13:0,60,687	0/0:21,0:21:57.17:0,57,689	0/0:24,0:24:57.06:0,57,635	0/0:15,0:15:39.12:0,39,471	0/0:27,0:27:81.25:0,81,978	0/0:18,0:18:51.15:0,51,611	0/0:22,0:22:60.17:0,60,714	0/0:22,0:22:63.18:0,63,750	0/0:17,0:17:45.13:0,45,529	0/0:26,0:26:72.21:0,72,852	0/0:25,0:25:72.19:0,72,845	0/0:7,0:7:21:0,21,214
chr10	63976605	.	G	GC	25503.80	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=7.911;DP=726;FS=7.264;HRun=0;HaplotypeScore=126.8779;InbreedingCoeff=0.9999;MQ=93.37;MQ0=0;MQRankSum=-6.957;QD=44.51;ReadPosRankSum=2.533;VQSLOD=3.5974;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,39:40:99:1801,114,0	1/1:1,11:12:33.11:527,33,0	0/0:28,0:28:78.24:0,78,1046	0/0:34,0:34:86.37:0,86,1122	1/1:1,32:33:90.31:1425,90,0	1/1:0,37:37:99:1673,105,0	1/1:0,24:24:72.25:1151,72,0	1/1:1,30:31:90.21:1351,90,0	1/1:1,20:21:57.19:907,57,0	1/1:2,23:26:78.25:1199,78,0	1/1:0,24:24:66.14:1015,66,0	1/1:0,26:26:75.26:1191,75,0	0/0:21,0:21:63.20:0,63,864	1/1:1,30:31:84.29:1338,84,0	1/1:0,24:24:57.19:911,57,0	1/1:0,22:22:66.22:1050,66,0	1/1:0,24:24:69.24:1099,69,0	1/1:0,15:15:45.15:719,45,0	1/1:3,21:24:66.19:996,66,0	1/1:0,32:32:87.30:1382,87,0	1/1:0,35:36:99:1702,108,0	0/0:33,0:33:96.32:0,96,1343	0/0:16,0:16:42.11:0,42,552	0/0:21,0:21:60.16:0,60,816	1/1:0,22:22:60.20:954,60,0	1/1:0,22:22:66.22:1051,66,0	1/1:0,30:29:81.28:1294,81,0	1/1:0,17:17:48.16:767,48,0
chr10	63977106	.	A	ATCG	1855.43	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-2.980;DP=613;FS=7.411;HRun=0;HaplotypeScore=174.9130;InbreedingCoeff=0.8646;MQ=82.61;MQ0=0;MQRankSum=-5.198;QD=36.38;ReadPosRankSum=-7.956;VQSLOD=1.3249;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:7,30:37:62.18:1271,62,0	1/1:3,11:14:33.11:706,33,0	0/0:20,0:20:57.10:0,57,934	0/0:18,0:18:17.19:0,17,639	0/0:20,0:20:52.85:0,53,498	0/0:17,0:17:27.95:0,28,432	0/0:21,0:21:26.07:0,26,392	0/0:23,0:23:59.55:0,60,532	0/0:19,0:19:27.29:0,27,424	0/0:20,0:20:59.93:0,60,513	0/0:7,0:7:16.91:0,17,183	0/0:31,0:31:51.01:0,51,666	0/0:21,0:21:63.22:0,63,1162	0/0:31,0:31:6.42:0,6,570	0/0:24,0:24:61.75:0,62,588	0/0:14,0:14:20.14:0,20,337	0/0:39,0:39:87.44:0,87,973	0/0:22,0:22:3.33:0,3,397	0/0:22,0:22:34.75:0,35,505	0/0:19,0:19:27.58:0,28,452	0/0:28,0:28:43.50:0,44,595	0/0:16,0:16:48.15:0,48,852	0/0:13,0:13:36.12:0,36,645	0/0:28,0:28:81.28:0,81,1475	0/0:19,0:19:25.11:0,25,413	0/0:30,0:30:86.04:0,86,750	0/0:29,0:29:50.52:0,51,646	0/0:11,0:11:23.23:0,23,225
chr10	63977108	.	T	TG	6303.17	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=10.472;DP=609;FS=13.830;HRun=0;HaplotypeScore=132.1577;InbreedingCoeff=0.9797;MQ=82.72;MQ0=0;MQRankSum=-4.572;QD=12.84;ReadPosRankSum=2.764;VQSLOD=5.6909;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,29:38:65.76:758,66,0	1/1:2,11:14:33.10:423,33,0	0/0:20,0:20:55.17:0,55,757	0/0:18,0:18:48.12:0,48,625	1/1:20,0:20:42.76:159,43,0	1/1:16,0:16:40.87:159,41,0	1/1:21,0:21:56.96:292,57,0	1/1:23,0:23:60.09:313,60,0	1/1:18,0:18:47.01:218,47,0	1/1:20,0:20:50.64:292,51,0	1/1:7,0:7:7.16:51,7,0	1/1:30,0:30:67.43:354,67,0	0/0:21,0:21:63.21:0,63,881	1/1:28,0:28:71.63:336,72,0	1/1:24,0:24:60.16:296,60,0	1/1:15,0:15:37.62:166,38,0	1/1:38,0:38:98.53:444,99,0	1/1:23,0:23:54.35:236,54,0	1/1:22,0:22:62.89:337,63,0	1/1:19,0:19:29.80:153,30,0	1/1:28,0:28:68.28:330,68,0	0/0:17,0:17:45.15:0,45,629	0/0:14,0:14:36.11:0,36,486	0/0:28,0:28:84.27:0,84,1157	1/1:18,0:18:47.08:191,47,0	1/1:30,0:30:66.77:417,67,0	1/1:28,0:28:49.50:314,49,0	1/1:11,0:11:15.11:65,15,0
chr10	63977685	.	A	ATTGTTTGT	1563.87	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=-3.598;DP=642;FS=1.953;HRun=0;HaplotypeScore=176.9102;InbreedingCoeff=0.8048;MQ=67.16;MQ0=2;MQRankSum=-3.779;QD=25.22;ReadPosRankSum=-3.607;VQSLOD=3.0368;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:53.37:0,53,1170	0/0:8,0:8:21.06:0,21,451	0/0:44,0:36:32.28:0,32,454	0/0:33,0:19:18.05:0,18,323	1/1:5,23:31:51.03:1657,51,0	0/0:17,0:17:36.12:0,36,915	0/0:13,0:13:24.05:0,24,479	0/1:15,0:31:2.25:8,0,2	0/0:16,0:16:33.11:0,33,772	0/0:27,0:27:54.19:0,54,1365	0/0:22,0:22:39.11:0,39,879	0/0:14,0:14:27.09:0,27,656	0/0:20,0:20:36.04:0,36,805	0/0:16,0:16:27.08:0,27,597	0/0:22,0:22:42.12:0,42,930	0/0:22,0:22:51.15:0,51,1156	0/0:25,0:25:46.17:0,46,1061	0/0:20,0:20:51.15:0,51,1156	0/0:24,0:23:39.03:0,39,755	0/0:26,0:26:57.18:0,57,1381	0/0:9,0:11:30.09:0,30,674	0/0:24,0:24:54.19:0,54,1336	0/0:30,0:30:66.20:0,66,1545	0/0:20,0:20:39.08:0,39,792	0/0:22,0:22:39.13:0,39,969	0/0:33,0:33:60.19:0,60,1421	0/0:25,0:25:48.11:0,48,1049	0/0:18,0:18:39.12:0,39,937
chr10	63977739	.	G	GTT	763.74	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-1.941;DP=697;FS=0.677;HRun=9;HaplotypeScore=125.8960;InbreedingCoeff=0.9872;MQ=76.72;MQ0=2;MQRankSum=-2.820;QD=21.21;ReadPosRankSum=-0.207;VQSLOD=2.1993;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,18:26:53.67:793,54,0	1/1:2,1:10:15.49:89,15,0	0/0:57,0:37:37.85:0,38,425	0/0:66,0:40:24.94:0,25,283	0/0:31,0:35:65.61:0,66,774	0/0:22,0:22:60.15:0,60,639	0/0:16,0:16:48.12:0,48,511	0/0:27,0:27:57.09:0,57,603	0/0:7,0:7:17.94:0,18,175	0/0:32,0:32:48.12:0,48,855	0/0:25,0:25:66.10:0,66,690	0/0:14,0:14:42.11:0,42,447	0/0:24,0:24:66.16:0,66,702	0/0:14,0:14:36.07:0,36,380	0/0:24,0:24:60.11:0,60,630	0/0:19,0:19:51.13:0,51,542	0/0:27,0:29:75.57:0,76,804	0/0:22,0:23:62.71:0,63,640	0/0:22,0:22:54.12:0,54,574	0/0:24,0:24:63.15:0,63,670	0/0:13,0:13:36.06:0,36,372	0/0:22,0:22:51.09:0,51,534	0/0:26,0:26:69.16:0,69,734	0/0:17,0:17:42.02:0,42,427	0/0:24,0:24:63.15:0,63,670	0/0:27,0:27:72.17:0,72,766	0/0:30,0:31:83.92:0,84,865	0/0:18,0:18:36.07:0,36,383
chr10	63978397	.	TC	T	14439.80	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=6.695;DP=617;FS=2.786;HRun=5;HaplotypeScore=77.1385;InbreedingCoeff=0.9872;MQ=68.22;MQ0=3;MQRankSum=-2.552;QD=29.47;ReadPosRankSum=1.805;VQSLOD=5.5053;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,27:27:69.19:783,69,0	1/1:0,4:4:12.03:136,12,0	0/0:16,0:16:45.15:0,45,602	0/0:19,0:17:48.16:0,48,643	1/1:1,14:15:39.11:439,39,0	1/1:0,22:22:63.18:714,63,0	1/1:2,43:44:99:1225,108,0	1/1:1,19:20:57.16:644,57,0	1/1:2,12:14:36.10:408,36,0	1/1:2,13:14:30.08:340,30,0	1/1:0,12:12:30.08:336,30,0	1/1:0,28:28:81.23:919,81,0	0/0:21,0:21:60.17:0,60,787	1/1:0,19:19:51.15:578,51,0	1/1:0,17:17:51.15:579,51,0	1/1:1,19:20:54.15:613,54,0	1/1:1,35:36:99:1123,99,0	1/1:4,31:35:37.18:809,37,0	1/1:3,21:23:60.17:680,60,0	1/1:2,19:21:51.15:579,51,0	1/1:4,45:49:99:1494,132,0	0/0:12,0:12:33.11:0,33,451	0/0:13,0:13:36.12:0,36,492	0/0:46,0:45:99:0,120,1617	1/1:1,17:18:48.14:545,48,0	1/1:1,26:27:78.22:884,78,0	1/1:1,17:18:41.93:476,42,0	1/1:0,4:4:12.03:136,12,0
chr10	63979556	.	G	GAGAA	7259.09	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=5.857;DP=355;FS=55.206;HRun=0;HaplotypeScore=68.4808;InbreedingCoeff=0.8736;MQ=75.74;MQ0=4;MQRankSum=-9.662;QD=40.78;ReadPosRankSum=-5.200;VQSLOD=1.8151;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:57.62:0,58,892	0/0:5,0:5:9.03:0,9,146	0/0:28,0:17:47.78:0,48,803	0/0:21,0:12:27.06:0,27,470	0/0:19,0:20:45.14:0,45,810	1/1:0,0:9:6.02:139,6,0	1/1:4,8:11:27.02:574,27,0	0/0:7,0:7:8.31:0,8,87	1/1:1,7:8:18.06:429,18,0	1/1:2,5:9:27.06:537,27,0	1/1:2,6:8:21.03:309,21,0	1/1:0,10:10:24.08:622,24,0	0/0:12,0:14:35.76:0,36,618	1/1:1,0:6:3.01:69,3,0	1/1:0,9:9:18.06:456,18,0	1/1:3,12:15:33.11:802,33,0	1/1:1,11:12:21.50:489,22,0	1/1:3,11:16:27.09:678,27,0	1/1:2,9:11:15.93:653,16,0	1/1:1,8:10:27.09:562,27,0	1/1:3,8:11:6.02:79,6,0	0/0:14,0:14:36.12:0,36,679	0/0:10,0:10:24.08:0,24,439	0/0:31,0:31:81.28:0,81,1558	1/1:0,0:5:3.01:40,3,0	1/1:1,7:8:21.07:500,21,0	1/1:0,0:13:11.90:205,12,0	1/1:1,0:2:6.02:116,6,0
chr10	63979873	.	T	TAA	6500.93	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=9.432;DP=471;FS=2.496;HRun=5;HaplotypeScore=82.8384;InbreedingCoeff=0.9709;MQ=69.61;MQ0=0;MQRankSum=-6.479;QD=25.59;ReadPosRankSum=-1.182;VQSLOD=3.4211;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:80.88:0,81,987	0/0:11,0:11:30.09:0,30,378	0/0:21,0:20:51.10:0,51,602	0/0:13,0:13:21.45:0,21,222	0/0:31,0:31:78.21:0,78,966	1/1:2,12:16:25.86:365,26,0	1/1:0,6:7:9.03:147,9,0	0/0:35,0:34:40.83:0,41,310	1/1:7,10:17:21.54:340,22,0	1/1:0,9:11:26.64:347,27,0	1/1:3,5:8:19.70:232,20,0	1/1:5,8:14:18.51:265,19,0	0/0:15,0:15:39.12:0,39,495	1/1:1,12:14:24.07:363,24,0	1/1:5,9:16:32.96:443,33,0	1/1:7,6:13:26.59:390,27,0	1/1:4,24:27:48.09:719,48,0	1/1:6,11:18:41.67:565,42,0	1/1:4,9:14:31.54:382,32,0	1/1:3,7:11:18.03:263,18,0	1/1:0,3:8:10.81:123,11,0	0/0:11,0:11:24.06:0,24,291	0/0:21,0:21:57.16:0,57,711	0/0:25,0:25:54.17:0,54,688	1/1:3,4:10:22.11:233,22,0	1/1:7,15:22:49.32:671,49,0	1/1:1,12:16:33.10:509,33,0	1/1:3,6:9:9.03:146,9,0
chr10	63983706	.	CCACACACACA	C	7847.19	PASS	AB=0.789;AC=32;AF=0.615;AN=52;BaseQRankSum=6.641;DP=815;FS=0.000;HRun=0;HaplotypeScore=265.8204;InbreedingCoeff=0.5833;MQ=49.39;MQ0=31;MQRankSum=-8.096;QD=14.53;ReadPosRankSum=-1.601;VQSLOD=3.3711;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:35:25.26:0,25,342	0/0:7,0:7:9.03:0,9,168	./.	./.	0/0:19,0:21:30.10:0,30,1338	1/1:11,9:21:11.78:199,12,0	1/1:13,9:23:11.90:226,12,0	0/0:33,0:29:23.68:0,24,613	1/1:22,12:33:24:558,24,0	1/1:25,5:28:12.03:302,12,0	1/1:18,3:21:6.19:111,6,0	0/1:16,14:33:27.06:443,0,27	0/0:25,0:32:22.59:0,23,2015	1/1:17,12:31:26.86:571,27,0	1/1:26,18:48:44.47:1213,44,0	1/1:21,25:48:41.80:1094,42,0	0/1:18,4:23:19.38:247,0,19	0/1:11,1:10:77.79:78,0,94	1/1:17,6:20:12.32:378,12,0	1/1:21,7:31:3.51:71,4,0	1/1:52,3:54:5.48:113,5,0	0/0:22,0:24:39.12:0,39,1637	0/0:24,0:24:30.10:0,30,1110	0/0:38,0:38:54.19:0,54,2062	1/1:16,7:23:8.78:129,9,0	1/1:21,19:43:57.16:1502,57,0	1/1:16,13:29:17.55:535,18,0	0/1:5,3:8:62.92:77,0,63
chr10	63985218	.	CT	C	1135.98	PASS	AB=0.929;AC=5;AF=0.089;AN=56;BaseQRankSum=-4.179;DP=580;FS=0.000;HRun=10;HaplotypeScore=87.0377;InbreedingCoeff=0.8267;MQ=74.43;MQ0=1;MQRankSum=-0.420;QD=16.71;ReadPosRankSum=0.521;VQSLOD=3.9562;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,41:45:99:1048,122,0	1/1:2,8:10:23.98:208,24,0	0/0:45,0:28:41.65:0,42,397	0/0:26,0:13:17.78:0,18,151	0/0:33,0:34:61.56:0,62,834	0/0:23,0:23:59.79:0,60,337	0/0:11,0:11:20.84:0,21,115	0/0:29,0:29:66.10:0,66,707	0/0:14,0:14:12.27:0,12,147	0/0:23,0:23:48.88:0,49,242	0/0:22,0:22:53.54:0,54,299	0/0:12,0:12:31.98:0,32,178	0/0:19,0:19:47.91:0,48,494	0/0:12,0:12:32.40:0,32,175	0/0:21,0:21:45.20:0,45,256	0/0:21,0:21:25.06:0,25,209	0/0:29,0:29:68.78:0,69,395	0/0:19,0:19:49.46:0,49,280	0/0:12,0:12:31.47:0,31,159	0/0:23,0:23:55.91:0,56,316	0/0:12,0:12:28.89:0,29,153	0/0:16,0:16:39.11:0,39,431	0/0:15,0:15:30.55:0,31,333	0/0:16,1:17:13.03:0,13,362	0/0:19,0:19:40.60:0,41,220	0/0:16,0:16:31.52:0,32,161	0/0:22,0:22:53.75:0,54,318	0/1:12,1:13:1.99:2,0,108
chr10	63986118	.	G	GTT	12493.91	PASS	AB=0.711;AC=35;AF=0.625;AN=56;BaseQRankSum=13.972;DP=637;FS=12.146;HRun=2;HaplotypeScore=153.6686;InbreedingCoeff=0.8978;MQ=64.07;MQ0=6;MQRankSum=-0.124;QD=30.62;ReadPosRankSum=6.386;VQSLOD=3.5167;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:34:99:0,99,1519	0/0:8,0:8:21.06:0,21,320	0/0:35,0:26:66.65:0,67,915	0/0:32,0:19:54:0,54,728	0/0:27,0:26:78.19:0,78,1116	1/1:7,4:10:10.72:228,11,0	1/1:7,14:21:42.39:631,42,0	0/0:18,0:18:48.05:0,48,646	1/1:6,13:19:48.95:732,49,0	1/1:16,13:29:55.26:830,55,0	1/1:11,9:20:4.74:419,5,0	1/1:3,6:9:21.54:306,22,0	0/0:16,0:16:45.11:0,45,704	1/1:4,19:23:60.16:874,60,0	1/1:9,13:22:23.27:719,23,0	1/1:3,15:19:43.21:746,43,0	1/1:16,25:41:71.15:1250,71,0	1/1:12,9:21:32.53:541,33,0	0/1:19,13:32:31.32:779,0,31	1/1:12,11:23:39.13:652,39,0	1/1:18,12:30:64.68:867,65,0	0/0:15,0:15:45.14:0,45,703	0/0:17,0:16:45.14:0,45,710	0/0:26,0:26:75.17:0,75,1118	1/1:8,10:18:34.56:550,35,0	1/1:15,21:36:66.56:1134,67,0	1/1:7,11:19:47.78:627,48,0	1/1:4,11:15:44.12:607,44,0
chr10	63986119	.	G	GT	5642.22	PASS	AB=0.675;AC=25;AF=0.446;AN=56;BaseQRankSum=15.442;DP=639;FS=53.067;HRun=1;HaplotypeScore=165.4634;InbreedingCoeff=0.1833;MQ=62.51;MQ0=6;MQRankSum=-1.204;QD=13.73;ReadPosRankSum=11.970;VQSLOD=1.3318;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:33:96.22:0,96,1205	0/0:8,0:8:18.06:0,18,234	0/0:37,0:27:63.18:0,63,754	0/0:29,0:17:49.76:0,50,545	0/0:26,0:25:72.20:0,72,892	0/1:8,4:11:57.16:75,0,57	0/1:7,14:21:9.23:266,0,9	0/0:18,0:18:48.01:0,48,530	1/1:6,13:19:47.93:415,48,0	0/1:17,13:30:21.33:404,0,21	0/1:11,9:20:65.99:169,0,66	1/1:4,6:10:7.12:155,7,0	0/0:16,0:16:42.14:0,42,545	1/1:4,19:23:36.05:460,36,0	0/1:9,13:22:25.12:329,0,25	1/1:3,16:19:6.62:377,7,0	0/1:16,25:41:28.22:570,0,28	0/1:12,9:21:22.20:224,0,22	0/1:19,13:32:99:330,0,155	0/1:12,11:23:56.51:260,0,57	0/1:18,12:30:66.72:251,0,67	0/0:15,0:15:42.14:0,42,545	0/0:18,0:17:48.12:0,48,592	0/0:26,0:26:78.06:0,78,937	1/1:9,10:19:17.90:273,18,0	0/1:16,21:37:33.60:502,0,34	1/1:8,11:19:15.08:272,15,0	1/1:2,11:13:27.33:308,27,0
chr10	63986187	.	A	AT	823.77	PASS	AB=0.965;AC=10;AF=0.179;AN=56;BaseQRankSum=-4.800;DP=551;FS=0.000;HRun=10;HaplotypeScore=147.6392;InbreedingCoeff=0.6107;MQ=62.90;MQ0=4;MQRankSum=-0.618;QD=5.60;ReadPosRankSum=-0.756;VQSLOD=0.6005;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,9:17:36.05:371,36,0	1/1:3,5:8:12.03:126,12,0	0/1:24,0:15:4.19:4,0,85	0/1:25,0:13:1.28:1,0,7	0/0:22,0:21:50.93:0,51,418	0/0:10,0:10:17.97:0,18,148	0/0:16,0:16:17.92:0,18,148	1/1:14,14:29:23.54:453,24,0	0/0:17,0:17:26.95:0,27,219	0/0:37,0:37:89.85:0,90,737	0/0:18,1:19:15.48:0,15,322	0/1:6,1:8:12.72:13,0,92	0/0:13,0:13:24.41:0,24,197	0/0:19,0:19:26.95:0,27,222	0/0:14,0:14:32.96:0,33,271	0/0:16,0:16:35.95:0,36,295	0/0:27,0:27:41.93:0,42,345	0/0:16,0:15:25.69:0,26,214	0/0:34,0:35:70.90:0,71,567	0/0:18,0:18:47.94:0,48,394	0/0:13,0:13:17.97:0,18,148	0/0:10,0:10:23.71:0,24,197	0/0:17,0:17:38.92:0,39,319	0/0:14,0:14:29.96:0,30,246	0/0:25,0:25:60.75:0,61,486	0/1:33,1:34:1.99:2,0,482	0/0:33,0:34:64.64:0,65,514	0/0:12,0:12:23.97:0,24,197
chr10	63986208	.	TTC	T	9456.50	PASS	AB=1.000;AC=50;AF=0.893;AN=56;BaseQRankSum=-3.180;DP=512;FS=3.291;HRun=0;HaplotypeScore=93.3864;InbreedingCoeff=0.4872;MQ=57.25;MQ0=11;MQRankSum=0.834;QD=20.69;ReadPosRankSum=1.569;VQSLOD=5.3267;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:15,3:17:37.85:241,38,0	1/1:5,0:5:9.31:49,9,0	0/0:32,0:8:11.02:0,11,88	0/0:23,0:7:6.06:0,6,40	1/1:25,1:25:42.93:346,43,0	1/1:1,9:10:18.06:251,18,0	1/1:0,16:16:21.07:291,21,0	1/1:21,6:27:19.68:264,20,0	1/1:0,18:18:30.10:411,30,0	1/1:4,26:30:72.13:858,72,0	1/1:5,13:18:38.99:472,39,0	1/1:2,9:11:26.99:329,27,0	0/1:13,0:13:24.42:80,0,24	1/1:3,11:14:18.06:254,18,0	1/1:2,10:12:20.98:250,21,0	1/1:3,10:13:18:210,18,0	1/1:1,23:24:39.09:523,39,0	1/1:3,13:15:25.03:349,25,0	1/1:3,23:25:65.98:712,66,0	1/1:1,16:17:38.89:416,39,0	1/1:2,9:9:15.01:188,15,0	1/1:12,0:12:3.45:66,3,0	0/1:14,0:14:30.92:123,0,31	1/1:13,0:13:12.08:142,12,0	1/1:5,19:24:47.94:543,48,0	1/1:5,26:31:78.09:915,78,0	1/1:1,32:33:72.16:963,72,0	1/1:0,5:5:15.05:210,15,0
chr10	63986209	.	TCTC	T	2352.97	PASS	AB=0.971;AC=40;AF=0.714;AN=56;BaseQRankSum=5.035;DP=494;FS=0.512;HRun=0;HaplotypeScore=118.6439;InbreedingCoeff=-0.0734;MQ=57.44;MQ0=11;MQRankSum=-2.527;QD=5.09;ReadPosRankSum=3.301;VQSLOD=2.5173;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:17,0:17:7.15:125,0,7	0/1:5,0:5:2.49:2,0,18	0/0:32,0:8:13.91:0,14,129	0/1:23,0:7:1.62:2,0,49	0/1:25,0:24:56.45:107,0,56	1/1:10,0:10:16.63:74,17,0	1/1:16,0:16:19.31:85,19,0	0/1:23,3:26:32.33:32,0,74	1/1:18,0:18:27.62:125,28,0	0/1:28,0:28:2.54:138,0,3	0/1:15,1:17:3.67:122,0,4	1/1:10,1:11:25.34:133,25,0	0/1:13,0:13:42.57:43,0,109	0/1:12,1:13:4.28:84,0,4	1/1:11,0:11:15.65:67,16,0	0/1:12,0:12:8.59:35,0,9	1/1:24,0:24:16.58:131,17,0	1/1:16,0:15:25.20:114,25,0	1/1:24,0:23:12:123,12,0	0/1:16,0:16:4.30:64,0,4	1/1:11,0:9:12.38:53,12,0	0/1:11,0:11:35.08:35,0,77	0/1:12,1:13:57.01:57,0,113	0/1:13,0:13:51.40:51,0,56	1/1:21,1:22:30.23:140,30,0	1/1:27,1:28:40.67:226,41,0	1/1:33,0:33:62.52:277,63,0	1/1:5,0:5:13.98:64,14,0
chr10	63986211	.	TC	T	7083.87	PASS	AB=1.000;AC=51;AF=0.911;AN=56;BaseQRankSum=-1.754;DP=485;FS=1.150;HRun=1;HaplotypeScore=87.8204;InbreedingCoeff=0.7266;MQ=56.32;MQ0=11;MQRankSum=0.784;QD=16.36;ReadPosRankSum=1.976;VQSLOD=5.1670;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,6:20:50.05:458,50,0	1/1:4,1:5:11.94:94,12,0	0/0:30,0:6:11.03:0,11,83	0/0:22,0:7:4.49:0,4,40	1/1:19,6:24:58.45:438,58,0	1/1:9,0:9:17.95:144,18,0	1/1:16,0:16:20.93:166,21,0	1/1:24,2:26:41.66:351,42,0	1/1:18,0:18:29.86:232,30,0	1/1:26,0:26:57.15:573,57,0	1/1:16,0:16:38.76:293,39,0	1/1:11,0:11:26.85:204,27,0	1/1:13,0:13:19.22:128,19,0	1/1:13,0:13:17.96:147,18,0	1/1:10,0:10:20.89:161,21,0	1/1:10,1:11:17.90:152,18,0	1/1:23,0:23:38.87:308,39,0	1/1:15,0:14:24.90:206,25,0	1/1:25,0:24:50.08:482,50,0	1/1:16,0:16:38.77:291,39,0	1/1:11,0:9:14.93:116,15,0	1/1:11,0:11:22.03:159,22,0	0/1:13,0:13:1.26:164,0,1	1/1:11,1:12:28.83:230,29,0	1/1:21,1:22:44.84:342,45,0	1/1:27,0:27:74.99:577,75,0	1/1:33,0:33:69.67:551,70,0	1/1:5,0:5:14.96:120,15,0
chr10	63989439	.	C	CTTCT	963.95	PASS	AB=0.784;AC=7;AF=0.135;AN=52;BaseQRankSum=0.181;DP=727;FS=0.783;HRun=0;HaplotypeScore=114.6709;InbreedingCoeff=0.7685;MQ=65.14;MQ0=9;MQRankSum=-1.182;QD=10.15;ReadPosRankSum=-2.245;VQSLOD=2.8171;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:31,0:31:15.02:220,15,0	1/1:9,0:9:5.98:69,6,0	./.	./.	0/1:21,6:29:99:318,0,388	0/0:13,0:15:30.09:0,30,422	0/0:20,0:20:24.05:0,24,323	0/0:35,0:34:8.94:0,9,70	1/1:14,12:26:21.07:493,21,0	0/0:29,0:29:45.12:0,45,631	0/0:22,0:22:36.10:0,36,522	0/0:21,0:21:33.10:0,33,482	0/0:23,0:23:29.03:0,29,481	0/0:23,0:23:42.12:0,42,610	0/0:37,0:37:72.24:0,72,1079	0/0:28,0:28:20.24:0,20,550	0/0:31,0:32:69.22:0,69,1010	0/0:17,0:17:36.10:0,36,529	0/0:21,0:19:18.05:0,18,258	0/0:26,0:26:57.18:0,57,850	0/0:24,0:24:31.91:0,32,440	0/0:21,0:21:30.07:0,30,412	0/0:31,0:31:69.22:0,69,1015	0/0:31,0:31:51.16:0,51,751	0/0:45,0:45:67.70:0,68,1327	0/0:26,0:26:45.13:0,45,649	0/0:33,0:33:57.19:0,57,864	0/0:19,0:20:48.06:0,48,596
chr10	63989453	.	T	TCTTTCTTC	697.71	PASS	AB=1.000;AC=6;AF=0.107;AN=56;BaseQRankSum=4.685;DP=697;FS=0.804;HRun=0;HaplotypeScore=164.3436;InbreedingCoeff=0.6412;MQ=59.89;MQ0=13;MQRankSum=-0.645;QD=7.67;ReadPosRankSum=1.935;VQSLOD=2.7333;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:3,26:34:15.05:583,15,0	1/1:1,6:8:10.06:185,10,0	0/1:24,0:11:0.86:1,0,15	0/0:23,0:5:11.92:0,12,90	0/0:28,0:28:10.23:0,10,934	0/0:16,0:16:42.10:0,42,833	0/0:21,0:21:60.06:0,60,894	0/0:20,0:19:28.04:0,28,418	0/1:25,0:25:50.17:50,0,176	0/0:24,0:24:63.19:0,63,1278	0/0:20,0:20:48.11:0,48,1036	0/0:20,0:20:60:0,60,1070	0/0:22,0:22:65.32:0,65,1090	0/0:28,0:28:81.05:0,81,1413	0/0:36,0:36:99:0,102,2114	0/0:25,0:25:67.40:0,67,1223	0/0:31,0:30:90.19:0,90,1948	0/0:19,0:19:57.06:0,57,1129	0/0:17,0:14:35.99:0,36,602	0/0:26,0:26:75.14:0,75,1622	0/0:21,0:21:54.07:0,54,913	0/0:22,0:22:63.11:0,63,1032	0/0:33,0:33:93.23:0,93,2006	0/0:32,0:32:87.04:0,87,1535	0/0:49,0:49:99:0,116,2701	0/0:23,0:23:63.17:0,63,1295	0/0:30,0:30:86.84:0,87,1717	0/0:20,0:20:60.14:0,60,1154
chr10	63989475	.	T	TC	107.60	PASS	AB=0.767;AC=1;AF=0.018;AN=56;BaseQRankSum=3.864;DP=667;FS=3.448;HRun=1;HaplotypeScore=73.0861;InbreedingCoeff=-0.0194;MQ=61.00;MQ0=6;MQRankSum=0.193;QD=4.68;ReadPosRankSum=-2.935;VQSLOD=-0.5390;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:39.09:0,39,487	0/0:6,0:6:12.51:0,13,149	0/0:22,0:12:20.49:0,20,330	0/0:32,0:15:33.54:0,34,388	0/0:24,0:24:72.17:0,72,938	0/0:13,0:13:38.90:0,39,475	0/0:22,0:22:63.20:0,63,864	0/1:16,7:22:99:182,0,515	0/0:24,0:24:53.87:0,54,619	0/0:23,0:23:69.23:0,69,951	0/0:18,0:18:54.16:0,54,725	0/0:20,0:20:57.18:0,57,780	0/0:26,0:26:76.13:0,76,1030	0/0:25,0:25:73.13:0,73,1003	0/0:40,0:40:99:0,117,1593	0/0:19,0:19:57.19:0,57,797	0/0:33,0:32:93.04:0,93,1194	0/0:24,0:24:32.70:0,33,773	0/0:14,0:12:33.11:0,33,459	0/0:28,0:28:84.25:0,84,1140	0/0:17,0:17:48.15:0,48,653	0/0:19,0:19:57.18:0,57,779	0/0:29,0:29:84.28:0,84,1166	0/0:29,0:29:81.26:0,81,1116	0/0:41,0:41:99:0,122,1581	0/0:22,0:22:66.22:0,66,920	0/0:28,0:27:84.28:0,84,1171	0/0:16,0:16:48.05:0,48,645
chr10	63990989	.	GGC	G	1003.08	PASS	AB=1.000;AC=30;AF=0.536;AN=56;BaseQRankSum=-2.326;DP=272;FS=4.491;HRun=0;HaplotypeScore=45.2190;InbreedingCoeff=0.4561;MQ=90.32;MQ0=4;MQRankSum=-0.585;QD=7.06;ReadPosRankSum=-0.095;VQSLOD=2.4703;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:6:15.33:0,15,142	0/0:2,0:2:5.84:0,6,39	0/0:21,0:14:26.10:0,26,297	0/0:55,0:29:22.44:0,22,330	0/0:4,0:4:5.99:0,6,48	1/1:5,0:5:11.99:100,12,0	0/1:8,0:8:4.69:86,0,5	0/0:9,0:9:21.90:0,22,190	1/1:12,1:13:5.68:91,6,0	1/1:6,0:6:11.96:105,12,0	1/1:2,0:2:3:26,3,0	0/1:9,0:9:33.06:57,0,33	0/0:7,0:7:17.23:0,17,180	1/1:10,0:10:11.41:117,11,0	0/1:7,0:6:2.82:20,0,3	0/1:4,0:4:3.21:22,0,3	1/1:10,0:10:5:43,5,0	1/1:8,1:9:18.40:139,18,0	1/1:6,0:6:1.53:72,2,0	0/1:7,0:7:0.69:42,0,1	1/1:2,23:25:3.01:44,3,0	0/0:5,0:5:9:0,9,96	0/0:6,0:6:12.01:0,12,161	0/0:13,0:13:39:0,39,502	1/1:7,0:7:11.62:122,12,0	1/1:3,0:3:1.77:8,2,0	1/1:5,2:7:1.04:75,1,0	0/1:4,0:3:5.13:13,0,5
chr10	63990990	.	G	GCTCT	1089.36	PASS	AB=0.975;AC=29;AF=0.518;AN=56;BaseQRankSum=2.037;DP=272;FS=17.317;HRun=0;HaplotypeScore=56.5321;InbreedingCoeff=0.4622;MQ=88.79;MQ0=5;MQRankSum=-2.960;QD=8.13;ReadPosRankSum=1.113;VQSLOD=0.2105;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:6:15.03:0,15,195	0/0:2,0:2:5.85:0,6,63	0/0:21,0:14:32.77:0,33,439	0/0:52,0:28:40.35:0,40,607	0/0:5,0:5:5.67:0,6,96	1/1:5,0:5:0.42:1,0,0	1/1:8,0:8:8.43:106,8,0	0/0:10,0:10:3.82:0,4,323	1/1:11,0:11:5.93:82,6,0	1/1:6,0:6:2.29:28,2,0	0/1:2,0:2:0.02:0,0,0	1/1:6,1:9:11.45:220,11,0	0/0:8,0:8:18.06:0,18,320	1/1:8,1:10:11.38:140,11,0	1/1:2,4:5:2.47:71,2,0	1/1:4,0:4:5.48:111,5,0	1/1:4,6:10:3:72,3,0	1/1:9,0:9:12.63:93,13,0	0/1:6,0:6:35.97:42,0,36	0/0:7,0:7:1.96:0,2,7	0/1:26,0:26:15.41:41,0,15	0/0:4,0:4:9:0,9,98	0/0:6,0:6:12.04:0,12,218	0/0:13,0:13:39.13:0,39,690	0/1:7,0:7:0.03:0,0,0	1/1:3,0:3:3.01:54,3,0	0/1:6,0:7:11.23:141,0,11	1/1:4,0:3:5.96:60,6,0
chr10	63990998	.	T	TCTCT	1236.62	PASS	AB=1.000;AC=39;AF=0.750;AN=52;BaseQRankSum=0.482;DP=288;FS=4.861;HRun=0;HaplotypeScore=59.6855;InbreedingCoeff=0.3700;MQ=74.30;MQ0=9;MQRankSum=-1.991;QD=6.61;ReadPosRankSum=-1.868;VQSLOD=1.1429;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:8:3.47:26,3,0	1/1:3,0:3:0.89:2,1,0	0/0:19,0:10:2.21:0,2,35	0/0:52,0:25:7.77:0,8,109	1/1:7,0:7:1.41:2,1,0	0/1:9,0:9:0.32:0,0,0	1/1:12,0:12:6.02:111,6,0	1/1:14,0:13:8.94:66,9,0	1/1:6,4:11:6.01:83,6,0	1/1:7,0:7:3.01:36,3,0	1/1:2,0:2:0.47:1,0,0	1/1:9,0:9:12.04:221,12,0	0/0:6,0:6:9.02:0,9,125	1/1:10,0:10:9.01:124,9,0	1/1:6,0:5:3.01:72,3,0	1/1:6,0:6:6.02:110,6,0	1/1:7,0:7:6.02:143,6,0	1/1:6,0:6:5.97:48,6,0	1/1:9,0:8:3:26,3,0	1/1:8,0:8:0.94:2,1,0	0/1:28,0:28:20.75:43,0,21	./.	0/0:4,0:4:6.02:0,6,97	0/0:10,0:9:18.06:0,18,285	./.	1/1:7,0:7:3.90:56,4,0	0/1:8,0:8:14.58:145,0,15	1/1:7,0:4:5.99:61,6,0
chr10	63993314	.	TTA	T	999.85	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.278;DP=577;FS=0.613;HRun=0;HaplotypeScore=78.1831;InbreedingCoeff=0.9833;MQ=76.04;MQ0=2;MQRankSum=0.005;QD=34.48;ReadPosRankSum=-4.835;VQSLOD=3.8876;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:41.46:0,41,972	0/0:11,0:11:32.91:0,33,317	0/0:36,0:23:26.41:0,26,372	0/0:19,0:16:15.68:0,16,162	0/0:15,0:15:45.10:0,45,706	0/0:20,0:20:60.15:0,60,1032	0/0:22,0:22:66.07:0,66,1137	1/1:0,28:29:83.99:1095,84,0	0/0:17,0:17:51.12:0,51,911	0/0:27,0:27:81.11:0,81,1359	0/0:20,0:20:37.51:0,38,971	0/0:16,0:16:47.97:0,48,714	0/0:16,0:16:48:0,48,714	0/0:16,0:16:48.11:0,48,852	0/0:17,0:17:51.12:0,51,878	0/0:12,0:12:36.04:0,36,568	0/0:37,0:37:99:0,105,1827	0/0:20,0:20:57.09:0,57,942	0/0:11,0:11:33.04:0,33,586	0/0:20,0:20:57.11:0,57,886	0/0:11,0:11:33.01:0,33,574	0/0:9,0:9:27.08:0,27,505	0/0:17,0:17:44.56:0,45,826	0/0:36,0:36:99:0,102,1682	0/0:19,0:19:57.18:0,57,1031	0/0:20,0:20:60.10:0,60,996	0/0:20,0:20:60.14:0,60,1001	0/0:22,0:22:66.10:0,66,1026
chr10	63994290	.	C	CCTTCT	6820.45	PASS	AB=0.888;AC=36;AF=0.643;AN=56;BaseQRankSum=2.128;DP=609;FS=27.338;HRun=0;HaplotypeScore=96.2501;InbreedingCoeff=0.5774;MQ=44.27;MQ0=39;MQRankSum=-1.937;QD=14.60;ReadPosRankSum=1.949;VQSLOD=2.5465;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:25:27.65:0,28,680	0/1:6,0:6:4.74:5,0,86	0/1:77,0:13:4.15:4,0,117	0/1:107,0:21:0.15:0,0,44	0/0:19,0:12:27.04:0,27,421	0/1:8,21:29:8.07:205,0,8	1/1:15,2:16:26.93:419,27,0	0/0:43,0:27:5.61:0,6,372	1/1:8,1:9:12.03:240,12,0	1/1:13,0:12:12.24:363,12,0	1/1:8,9:18:13.65:525,14,0	1/1:2,11:13:9.03:260,9,0	0/0:13,0:13:33.06:0,33,507	1/1:10,0:10:20.96:477,21,0	1/1:4,7:11:15.05:353,15,0	1/1:2,7:9:8.89:201,9,0	1/1:25,1:25:41.94:712,42,0	1/1:19,0:18:21.04:434,21,0	1/1:4,4:7:12.03:253,12,0	1/1:11,0:8:15.05:332,15,0	1/1:27,0:25:35.84:427,36,0	0/0:11,0:10:20.63:0,21,219	0/0:11,0:11:21.06:0,21,369	0/0:19,0:18:42:0,42,654	1/1:9,1:10:21.06:481,21,0	0/1:20,2:21:41.27:560,0,41	0/1:13,3:15:2.10:481,0,2	1/1:1,3:4:3.01:89,3,0
chr10	63994326	.	TTTCTC	T	4618.10	PASS	AB=0.903;AC=37;AF=0.685;AN=54;BaseQRankSum=2.426;DP=559;FS=12.506;HRun=0;HaplotypeScore=84.5522;InbreedingCoeff=0.5881;MQ=43.87;MQ0=39;MQRankSum=-2.095;QD=15.50;ReadPosRankSum=-0.348;VQSLOD=2.9229;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:18,3:19:15.81:305,0,16	1/1:0,2:2:5.98:76,6,0	0/0:78,0:9:2.62:0,3,59	0/0:104,0:11:5.46:0,5,119	0/0:14,0:14:16.85:0,17,264	1/1:21,2:20:17.95:290,18,0	1/1:2,14:16:6.02:113,6,0	0/1:16,0:12:80.58:135,0,81	1/1:2,11:13:12.02:225,12,0	1/1:10,1:8:18.04:251,18,0	1/1:12,3:14:20.86:325,21,0	1/1:14,1:14:11.99:166,12,0	0/0:15,0:15:30.10:0,30,764	1/1:5,4:9:6.02:106,6,0	1/1:11,3:12:17.98:271,18,0	1/1:7,5:11:15.04:277,15,0	1/1:20,2:22:21.03:356,21,0	1/1:8,19:26:15.05:282,15,0	1/1:7,1:6:3.01:56,3,0	1/1:6,3:9:17.95:255,18,0	1/1:15,1:14:14.87:169,15,0	0/0:10,0:10:27.09:0,27,740	0/0:11,0:11:24.01:0,24,505	0/0:24,0:24:60.13:0,60,1510	1/1:11,3:14:24.03:380,24,0	1/1:18,2:20:9.73:326,10,0	0/1:12,3:14:36.46:254,0,36	./.
chr10	63996123	.	TCACACACACA	T	3755.11	PASS	AB=1.000;AC=30;AF=0.682;AN=44;BaseQRankSum=3.294;DP=478;FS=3.895;HRun=0;HaplotypeScore=143.1760;InbreedingCoeff=0.3647;MQ=68.09;MQ0=13;MQRankSum=2.454;QD=13.41;ReadPosRankSum=0.770;VQSLOD=2.7237;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:33:3.01:71,3,0	1/1:4,0:10:9.03:234,9,0	./.	0/0:27,0:22:3.01:0,3,42	0/1:16,0:15:23.65:232,0,24	./.	0/1:24,0:24:99:188,0,128	./.	1/1:11,4:14:6.02:168,6,0	1/1:12,4:17:13.45:434,13,0	1/1:6,4:10:3.01:85,3,0	1/1:12,0:12:9.03:187,9,0	0/0:13,0:12:27.07:0,27,803	./.	./.	1/1:14,5:20:5.68:169,6,0	1/1:25,0:24:12.04:211,12,0	0/1:13,0:11:94.34:249,0,94	1/1:10,0:10:5.70:78,6,0	0/1:7,0:7:23.56:129,0,24	1/1:27,0:27:38.92:638,39,0	0/0:20,0:20:21.94:0,22,606	0/0:12,0:11:15.52:0,16,449	0/0:32,0:32:52.42:0,52,1631	./.	1/1:12,0:16:8.62:208,9,0	1/1:17,0:16:23.82:285,24,0	1/1:5,0:4:3.48:189,3,0
chr10	63998211	.	TGG	T	9343.02	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-0.706;DP=486;FS=13.221;HRun=9;HaplotypeScore=67.4309;InbreedingCoeff=0.9874;MQ=81.11;MQ0=1;MQRankSum=-3.284;QD=26.69;ReadPosRankSum=2.264;VQSLOD=3.1631;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:25:55.12:0,55,208	0/0:0,0:10:24.83:0,25,87	0/0:12,0:12:27.09:0,27,431	0/0:11,0:13:24.02:0,24,314	0/0:0,0:9:19.96:0,20,70	1/1:2,17:19:45.13:524,45,0	1/1:8,24:32:60.16:699,60,0	1/1:4,17:21:51.14:594,51,0	1/1:6,22:28:54.13:624,54,0	1/1:2,13:15:39.11:454,39,0	1/1:0,7:7:12.04:140,12,0	1/1:5,13:18:39.09:450,39,0	0/0:21,0:21:63.20:0,63,995	1/1:3,17:20:48.13:556,48,0	1/1:2,15:17:42.12:489,42,0	1/1:4,20:24:63.16:724,63,0	1/1:4,20:24:63.18:725,63,0	1/1:4,18:22:60.17:690,60,0	1/1:4,14:18:42.12:489,42,0	1/1:2,13:15:36.10:419,36,0	1/1:2,25:27:65.84:768,66,0	0/0:8,0:9:27.09:0,27,419	0/0:8,0:8:21.06:0,21,299	0/0:29,0:29:78.27:0,78,1280	1/1:1,7:7:15.04:175,15,0	1/1:1,8:9:24.04:256,24,0	1/1:4,13:17:36.09:419,36,0	1/1:5,4:9:14.95:148,15,0
chr10	63998219	.	GGT	G	2524.34	PASS	AB=0.973;AC=29;AF=0.518;AN=56;BaseQRankSum=11.788;DP=486;FS=6.663;HRun=0;HaplotypeScore=88.4891;InbreedingCoeff=0.3280;MQ=77.94;MQ0=1;MQRankSum=-1.640;QD=7.36;ReadPosRankSum=6.473;VQSLOD=2.1383;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:73.42:0,73,442	0/0:11,0:11:31.71:0,32,176	0/0:11,0:11:30.01:0,30,435	0/0:10,0:10:24.02:0,24,343	0/0:10,0:10:26.02:0,26,148	1/1:17,0:16:39.84:168,40,0	0/1:28,0:28:26.48:182,0,26	0/1:21,0:21:57.38:103,0,57	1/1:24,1:25:4.92:197,5,0	0/1:17,0:17:59.59:60,0,67	1/1:7,0:7:10.66:45,11,0	0/1:16,2:18:22.13:159,0,22	0/0:23,0:23:66.19:0,66,1084	0/1:22,1:23:62.17:158,0,62	1/1:16,1:17:15.54:146,16,0	1/1:22,1:23:12.04:211,12,0	0/1:24,3:27:19.20:250,0,19	1/1:18,4:22:55.03:337,55,0	0/1:16,0:16:8.94:91,0,9	1/1:15,1:16:17.47:159,17,0	0/1:29,0:29:28.24:175,0,28	0/0:10,0:10:30.09:0,30,470	0/0:9,0:9:21.06:0,21,339	0/0:30,0:30:90.27:0,90,1483	1/1:7,0:6:13.21:56,13,0	0/1:9,0:9:9.80:52,0,10	1/1:14,1:15:11.52:132,12,0	1/1:6,0:6:10.69:44,11,0
chr10	64000531	.	GGTT	G	6381.55	PASS	AB=0.944;AC=31;AF=0.554;AN=56;BaseQRankSum=-3.726;DP=673;FS=19.387;HRun=0;HaplotypeScore=218.0470;InbreedingCoeff=0.4784;MQ=60.45;MQ0=1;MQRankSum=6.803;QD=14.03;ReadPosRankSum=3.081;VQSLOD=3.0059;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:37:99:0,101,1144	0/0:8,0:8:24.05:0,24,247	0/0:17,0:12:17.14:0,17,327	0/1:10,0:5:14.90:15,0,20	0/0:27,0:27:78.15:0,78,844	1/1:16,1:17:19.65:235,20,0	1/1:12,4:16:20.31:305,20,0	0/0:37,0:36:99:0,108,1145	0/1:20,2:22:23.36:181,0,23	1/1:34,3:37:5.56:403,6,0	0/1:23,1:24:48.92:176,0,49	1/1:22,0:22:28.83:269,29,0	0/0:16,0:16:48.13:0,48,918	0/1:27,4:31:23.87:335,0,24	1/1:28,2:30:14.14:485,14,0	0/1:19,1:20:11.58:206,0,12	1/1:28,3:31:22.28:564,22,0	1/1:26,2:26:35.51:462,36,0	1/1:14,5:19:28.31:610,28,0	0/1:22,3:25:8.26:239,0,8	1/1:21,2:23:37.89:406,38,0	0/0:20,0:20:60.18:0,60,1275	0/0:19,0:19:57.09:0,57,1155	0/0:36,0:36:99:0,105,2284	1/1:29,4:33:21.07:631,21,0	1/1:32,2:34:28.77:554,29,0	1/1:23,0:24:4.63:237,5,0	0/1:9,0:9:9.72:68,0,10
chr10	64000532	.	GT	G	2201.50	PASS	AB=0.972;AC=10;AF=0.179;AN=56;BaseQRankSum=-11.772;DP=679;FS=2.453;HRun=9;HaplotypeScore=217.2202;InbreedingCoeff=0.7104;MQ=60.00;MQ0=1;MQRankSum=7.377;QD=14.98;ReadPosRankSum=-5.487;VQSLOD=0.1598;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:15,23:37:77.83:711,78,0	1/1:2,6:8:18.01:164,18,0	0/1:16,1:12:23.84:24,0,49	0/0:11,0:5:1.25:0,1,3	1/1:0,27:27:74.92:674,75,0	0/0:16,0:16:24.99:0,25,137	0/0:17,0:17:14.26:0,14,120	1/1:7,30:36:74.83:762,75,0	0/0:22,0:22:38.63:0,39,180	0/0:39,0:39:63.56:0,64,314	0/0:23,0:23:43.22:0,43,206	0/0:22,0:22:47.20:0,47,201	0/0:16,0:16:36.08:0,36,395	0/0:32,0:32:42.38:0,42,237	0/0:29,0:29:11.71:0,12,171	0/0:20,0:20:30.21:0,30,161	0/0:32,0:32:40.96:0,41,238	0/0:29,0:27:26.50:0,27,181	0/1:20,0:20:33.13:33,0,54	0/0:25,0:25:38:0,38,208	0/0:23,0:23:20.83:0,21,116	0/0:19,0:19:51.15:0,51,587	0/0:19,0:19:43.89:0,44,474	0/0:34,0:34:93.24:0,93,1043	0/0:34,0:34:31.17:0,31,205	0/0:38,0:38:30.85:0,31,235	0/0:23,0:23:50.16:0,50,227	0/0:9,0:9:9.64:0,10,66
chr10	64000538	.	T	TG	16428.01	PASS	AB=1.000;AC=37;AF=0.661;AN=56;BaseQRankSum=11.521;DP=691;FS=0.311;HRun=0;HaplotypeScore=173.8186;InbreedingCoeff=0.9007;MQ=56.00;MQ0=1;MQRankSum=-5.263;QD=34.37;ReadPosRankSum=2.856;VQSLOD=4.3072;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:37:99:0,101,597	0/0:7,0:7:17.53:0,18,102	0/1:18,0:10:9.60:10,0,117	0/0:14,0:3:2.44:0,2,5	0/0:29,0:29:76.09:0,76,464	1/1:2,15:17:50.83:671,51,0	1/1:9,12:21:62.98:718,63,0	0/0:38,0:37:99:0,103,665	1/1:5,18:23:47.16:813,47,0	1/1:11,27:38:99:1431,114,0	1/1:3,19:22:60.12:780,60,0	1/1:2,17:19:41.19:710,41,0	0/0:13,0:13:39.10:0,39,495	1/1:9,23:32:93.20:1208,93,0	1/1:4,24:28:81.18:1066,81,0	1/1:5,16:21:60.14:772,60,0	1/1:9,22:32:96.07:1154,96,0	1/1:6,23:27:75.20:986,75,0	1/1:8,14:23:68.99:771,69,0	1/1:4,21:25:75.14:979,75,0	1/1:3,19:22:51.07:661,51,0	0/0:20,0:19:57.17:0,57,759	0/0:20,0:20:57.12:0,57,723	0/0:34,0:34:96.24:0,96,1268	1/1:11,22:33:96.10:1163,96,0	1/1:13,27:40:99:1408,117,0	1/1:5,18:23:60.15:810,60,0	1/1:4,7:11:24.06:318,24,0
chr10	64000561	.	GTT	G	1131.39	PASS	AB=0.978;AC=17;AF=0.304;AN=56;BaseQRankSum=-0.451;DP=702;FS=1.345;HRun=11;HaplotypeScore=225.4908;InbreedingCoeff=-0.0114;MQ=53.14;MQ0=6;MQRankSum=-1.886;QD=2.96;ReadPosRankSum=-2.331;VQSLOD=-0.7585;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:10,23:32:72.12:755,72,0	1/1:1,5:6:15.01:152,15,0	0/0:22,1:5:9.18:0,9,60	0/0:21,0:5:8.96:0,9,77	0/0:39,0:39:90.29:0,90,1338	0/1:20,0:20:3.25:35,0,3	0/1:21,0:21:13.05:60,0,13	0/0:27,0:26:46.44:0,46,614	0/0:23,0:23:20.39:0,20,134	0/1:39,0:39:18.73:19,0,20	0/0:24,0:24:11.17:0,11,61	0/1:24,0:24:13.40:28,0,13	0/0:10,0:10:27.08:0,27,391	0/0:26,0:26:3.03:0,3,53	0/0:27,0:27:4.27:0,4,66	0/1:22,0:22:10.42:10,0,68	0/1:28,0:29:6.96:49,0,7	0/1:34,0:33:32.91:36,0,33	0/1:16,0:21:26.91:27,0,61	0/1:32,0:31:30.59:31,0,78	0/1:13,0:11:0.41:37,0,0	0/0:25,0:25:63.61:0,64,868	0/0:24,0:27:62.51:0,63,854	0/0:36,0:36:90.19:0,90,1255	0/1:27,0:27:28.51:29,0,32	0/1:35,0:35:23.19:23,0,30	0/1:24,0:23:4.96:5,0,38	0/0:9,0:9:11.84:0,12,33
chr10	64000571	.	TTG	T	9330.82	PASS	AB=1.000;AC=40;AF=0.714;AN=56;BaseQRankSum=14.043;DP=686;FS=8.243;HRun=0;HaplotypeScore=184.0061;InbreedingCoeff=0.8444;MQ=58.66;MQ0=7;MQRankSum=-6.981;QD=18.44;ReadPosRankSum=2.015;VQSLOD=4.0813;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:31,0:30:1.08:191,0,1	1/1:5,0:5:13.59:74,14,0	0/0:29,0:9:13.01:0,13,124	0/0:23,0:8:10.57:0,11,103	0/0:35,0:34:91.71:0,92,1132	1/1:15,2:17:36.15:311,36,0	1/1:20,3:23:53.69:519,54,0	0/1:25,0:25:58.88:59,0,267	1/1:20,1:21:36.32:364,36,0	1/1:33,1:33:83.50:823,84,0	1/1:26,1:27:70.44:554,70,0	1/1:23,3:25:56.07:429,56,0	0/0:11,0:11:29.81:0,30,332	1/1:20,2:22:58.93:492,59,0	1/1:24,1:25:55.67:558,56,0	1/1:21,2:23:53.71:455,54,0	1/1:23,5:28:57.41:481,57,0	1/1:29,3:31:65.31:574,65,0	1/1:22,1:23:45.24:404,45,0	1/1:27,5:31:87.17:734,87,0	1/1:10,2:10:29.16:188,29,0	0/0:23,0:22:65.82:0,66,777	0/0:24,0:24:64.24:0,64,734	0/0:35,0:35:91.98:0,92,1099	1/1:23,4:27:73.92:581,74,0	1/1:34,2:36:99:932,103,0	1/1:23,2:24:50.03:415,50,0	1/1:12,0:12:21.01:193,21,0
chr10	64000572	.	TG	T	12026.94	PASS	AB=1.000;AC=39;AF=0.696;AN=56;BaseQRankSum=12.785;DP=681;FS=8.221;HRun=1;HaplotypeScore=162.5592;InbreedingCoeff=0.7583;MQ=59.54;MQ0=7;MQRankSum=-7.143;QD=24.01;ReadPosRankSum=0.904;VQSLOD=4.0989;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:29:7.03:7,0,80	0/1:5,0:5:1.83:8,0,2	0/0:27,3:10:3.14:0,3,132	0/0:22,1:8:10.07:0,10,86	0/0:35,0:34:90.96:0,91,870	1/1:6,11:17:36.20:379,36,0	1/1:7,15:22:53.73:587,54,0	0/1:25,0:25:89.79:90,0,183	1/1:5,16:21:47.75:560,48,0	1/1:6,27:32:83.58:1041,84,0	1/1:3,24:27:71.88:773,72,0	1/1:7,19:25:56.47:580,56,0	0/0:11,0:11:29.78:0,30,267	1/1:6,16:22:59.83:677,60,0	1/1:3,22:25:56.61:797,57,0	1/1:5,18:23:62.18:683,62,0	1/1:10,18:28:57.47:593,57,0	1/1:10,22:31:65.65:721,66,0	1/1:18,5:23:53.01:515,53,0	1/1:7,24:31:89.78:985,90,0	1/1:10,2:10:28.58:212,29,0	0/0:23,0:22:64.93:0,65,583	0/0:24,0:24:50.38:0,50,548	0/0:34,0:34:79.47:0,79,834	1/1:8,19:27:74.50:792,75,0	1/1:5,31:36:99:1159,103,0	1/1:4,20:23:52.80:586,53,0	1/1:0,12:12:21.07:283,21,0
chr10	64000573	.	G	GTT	6417.26	PASS	AB=1.000;AC=39;AF=0.696;AN=56;BaseQRankSum=10.156;DP=686;FS=3.843;HRun=11;HaplotypeScore=195.6113;InbreedingCoeff=0.9024;MQ=59.48;MQ0=7;MQRankSum=-5.604;QD=12.81;ReadPosRankSum=-0.759;VQSLOD=1.1872;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:30:69.06:0,69,691	0/0:5,0:5:12.50:0,12,124	0/1:30,0:10:20.29:20,0,154	0/0:23,0:8:16.96:0,17,132	0/0:35,0:34:71.80:0,72,757	1/1:16,0:16:20.90:175,21,0	1/1:22,0:22:29.96:294,30,0	1/1:23,2:25:27.08:379,27,0	1/1:20,1:21:44.67:296,45,0	1/1:34,0:33:75.36:640,75,0	1/1:27,0:27:64.22:460,64,0	1/1:26,0:25:38.28:240,38,0	0/0:9,0:9:23.99:0,24,241	1/1:22,0:22:45.90:310,46,0	1/1:24,0:24:54.71:366,55,0	1/1:24,0:24:43.24:278,43,0	1/1:28,0:28:30.66:255,31,0	1/1:32,0:31:45.71:376,46,0	1/1:23,0:23:24.67:290,25,0	1/1:30,1:30:56.99:477,57,0	1/1:11,1:10:11.60:87,12,0	0/0:21,0:22:48.05:0,48,559	0/0:24,0:25:45.03:0,45,522	0/0:34,0:34:75.12:0,75,778	1/1:28,0:28:53.23:346,53,0	1/1:37,0:37:84.77:700,85,0	1/1:24,0:23:41.52:280,42,0	1/1:15,0:15:20.72:148,21,0
chr10	64002536	.	C	CCAA	171.68	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.889;DP=602;FS=0.000;HRun=0;HaplotypeScore=115.2595;InbreedingCoeff=0.9273;MQ=91.36;MQ0=0;MQRankSum=0.196;QD=17.17;ReadPosRankSum=-2.493;VQSLOD=2.7782;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,108,1761	0/0:5,0:5:12.04:0,12,197	0/0:29,0:29:61.57:0,62,1051	0/0:24,0:24:52.30:0,52,797	1/1:2,7:10:12.04:258,12,0	0/0:16,0:16:48.16:0,48,799	0/0:41,0:41:99:0,117,1896	0/0:20,0:20:42.14:0,42,699	0/0:17,0:17:51.16:0,51,821	0/0:25,0:24:63.22:0,63,1044	0/0:10,0:10:24.08:0,24,398	0/0:28,0:28:81.24:0,81,1274	0/0:17,0:17:48.16:0,48,799	0/0:23,0:23:66.20:0,66,1045	0/0:31,0:31:84.27:0,84,1349	0/0:19,0:18:57.18:0,57,922	0/0:32,0:32:93.29:0,93,1494	0/0:27,0:27:78.20:0,78,1240	0/0:12,0:12:36.09:0,36,570	0/0:16,0:16:45.14:0,45,723	0/0:44,0:44:99:0,129,2040	0/0:19,0:19:51.17:0,51,848	0/0:11,0:11:33.11:0,33,548	0/0:43,0:43:99:0,123,1973	0/0:11,0:11:24.08:0,24,398	0/0:17,0:17:51.15:0,51,801	0/0:13,0:13:39.09:0,39,571	0/0:6,0:6:18.06:0,18,299
chr10	64002936	.	TG	T	2584.87	PASS	AB=0.588;AC=37;AF=0.661;AN=56;BaseQRankSum=1.137;DP=299;FS=16.359;HRun=9;HaplotypeScore=42.7422;InbreedingCoeff=0.7980;MQ=59.77;MQ0=13;MQRankSum=-1.690;QD=13.32;ReadPosRankSum=5.690;VQSLOD=1.3612;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:34:15.45:0,15,77	0/0:3,0:3:7.38:0,7,34	0/0:16,0:9:23.42:0,23,237	0/0:13,0:6:8.16:0,8,76	0/0:2,0:3:6.99:0,7,42	1/1:6,8:14:29.89:247,30,0	1/1:4,14:16:29.99:268,30,0	1/1:3,0:15:11.64:42,12,0	1/1:1,7:7:17.85:151,18,0	1/1:7,7:14:23.93:206,24,0	1/1:1,6:7:12:110,12,0	1/1:1,4:4:9:82,9,0	0/0:9,0:9:23.98:0,24,223	1/1:2,5:6:18.01:163,18,0	1/1:4,12:16:29.92:251,30,0	1/1:2,5:6:2.30:26,2,0	1/1:1,8:9:11.98:103,12,0	0/1:3,7:8:19.59:88,0,20	1/1:2,4:7:17.66:140,18,0	1/1:4,8:12:20.26:180,20,0	1/1:5,9:11:18.01:165,18,0	0/0:7,0:7:15.03:0,15,163	0/0:8,0:6:15.04:0,15,172	0/0:10,0:9:24.06:0,24,267	1/1:3,2:4:5.90:54,6,0	1/1:3,8:10:24.01:219,24,0	1/1:2,6:8:20.77:183,21,0	1/1:1,6:7:12.01:110,12,0
chr10	64002937	.	G	GT	1155.57	PASS	AB=0.969;AC=33;AF=0.589;AN=56;BaseQRankSum=1.182;DP=297;FS=6.644;HRun=1;HaplotypeScore=51.5157;InbreedingCoeff=0.4063;MQ=60.67;MQ0=11;MQRankSum=-2.191;QD=5.35;ReadPosRankSum=4.754;VQSLOD=0.7517;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:36,1:36:0.04:8,0,0	0/0:3,0:3:5.29:0,5,16	0/0:16,0:9:23.06:0,23,241	0/0:13,0:6:6.85:0,7,75	0/1:3,0:3:0.73:1,0,23	1/1:9,5:14:3.03:206,3,0	1/1:18,1:17:7.37:69,7,0	0/0:15,0:15:35.37:0,35,188	1/1:7,1:7:10.43:58,10,0	1/1:10,3:13:4.21:123,4,0	0/1:7,0:7:6.62:7,0,19	1/1:4,1:4:5.49:32,5,0	0/0:9,0:9:26.98:0,27,270	1/1:6,1:6:11.58:57,12,0	1/1:12,2:14:2.66:180,3,0	1/1:7,0:6:0.85:2,1,0	0/1:9,0:9:16.89:51,0,17	0/1:9,1:8:27.76:55,0,28	0/1:8,1:9:0.78:82,0,1	1/1:10,1:11:17.81:171,18,0	0/1:14,0:11:19.65:20,0,24	0/0:7,0:7:15.03:0,15,177	0/0:8,0:7:15.05:0,15,199	0/0:10,0:9:24.06:0,24,294	1/1:4,0:4:2.10:5,2,0	1/1:10,0:9:10.94:63,11,0	1/1:6,2:8:15.67:127,16,0	1/1:7,0:7:5.91:14,6,0
chr10	64003222	.	A	ATTT	2841.44	PASS	AB=0.987;AC=37;AF=0.661;AN=56;BaseQRankSum=7.910;DP=446;FS=1.016;HRun=12;HaplotypeScore=103.3006;InbreedingCoeff=0.5872;MQ=73.13;MQ0=3;MQRankSum=-0.208;QD=8.28;ReadPosRankSum=2.114;VQSLOD=0.2358;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,21:33:70.70:1119,71,0	1/1:0,2:2:3.01:55,3,0	0/0:17,0:12:12.65:0,13,91	0/1:15,0:12:2.47:2,0,46	0/0:11,0:11:20.95:0,21,225	1/1:21,0:23:43.79:190,44,0	0/1:23,0:23:11.77:77,0,12	0/0:24,0:21:47.88:0,48,535	1/1:14,0:15:24.62:87,25,0	0/1:9,0:9:1.51:19,0,2	0/1:12,0:12:8.86:40,0,9	1/1:22,0:22:36.77:144,37,0	0/0:15,0:15:23.84:0,24,259	1/1:12,0:12:25.02:93,25,0	1/1:18,0:18:33.93:170,34,0	1/1:17,0:19:24.84:202,25,0	1/1:29,0:31:58.35:243,58,0	1/1:13,0:13:16.49:55,16,0	1/1:23,0:23:36.11:170,36,0	1/1:6,0:6:14.37:56,14,0	1/1:25,0:26:19.39:86,19,0	0/0:8,0:9:4.21:0,4,246	0/0:10,0:10:17.45:0,17,176	0/0:16,0:16:38.99:0,39,437	1/1:5,0:5:9.14:32,9,0	1/1:17,0:17:15.59:82,16,0	0/1:13,0:13:11.42:74,0,11	1/1:0,0:4:3.01:39,3,0
chr10	64003223	.	T	TTC	11009.65	PASS	AB=1.000;AC=37;AF=0.661;AN=56;BaseQRankSum=-1.263;DP=460;FS=5.243;HRun=0;HaplotypeScore=74.2221;InbreedingCoeff=0.8450;MQ=71.00;MQ0=3;MQRankSum=-1.557;QD=32.29;ReadPosRankSum=4.406;VQSLOD=6.5099;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:33:70.29:70,0,136	0/0:2,0:2:1.41:0,1,17	0/0:18,0:12:20.86:0,21,228	0/0:14,0:11:21.58:0,22,211	0/0:11,0:11:33.03:0,33,399	1/1:4,21:25:63.20:1010,63,0	1/1:8,16:24:60.21:900,60,0	0/0:24,0:21:63.18:0,63,864	1/1:3,14:18:36.11:581,36,0	1/1:2,8:10:29.80:404,30,0	1/1:6,8:14:29.67:345,30,0	1/1:2,19:21:47.99:761,48,0	0/0:14,0:14:36.09:0,36,468	1/1:2,10:12:36.12:592,36,0	1/1:3,17:20:45.13:704,45,0	1/1:5,14:19:53.97:787,54,0	1/1:5,27:32:72.22:1173,72,0	1/1:1,13:15:21.06:348,21,0	1/1:2,21:24:69.55:968,70,0	1/1:1,5:6:18.06:297,18,0	1/1:6,22:28:51.48:813,51,0	0/0:9,0:9:10.91:0,11,350	0/0:10,0:10:27:0,27,314	0/0:17,0:17:48.14:0,48,674	1/1:0,5:5:12.04:198,12,0	1/1:3,16:18:42.10:651,42,0	1/1:4,10:13:18.23:372,18,0	1/1:2,0:2:3.01:32,3,0
chr10	64003224	.	T	TC	4500.41	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=5.455;DP=456;FS=4.163;HRun=0;HaplotypeScore=90.3349;InbreedingCoeff=0.9492;MQ=70.82;MQ0=3;MQRankSum=0.762;QD=14.80;ReadPosRankSum=5.100;VQSLOD=6.6199;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:78.46:0,78,423	0/0:2,0:2:5.65:0,6,31	0/0:18,0:12:29.11:0,29,221	0/0:14,0:11:23.14:0,23,212	0/0:11,0:11:33.03:0,33,386	1/1:25,0:25:61.74:374,62,0	1/1:22,2:24:61.06:438,61,0	0/0:24,0:21:63.17:0,63,786	1/1:18,0:18:35.10:215,35,0	1/1:11,1:12:28.29:206,28,0	1/1:9,2:11:28.15:217,28,0	1/1:21,1:22:43.77:271,44,0	0/0:14,0:14:39.02:0,39,457	1/1:11,1:12:35.28:222,35,0	1/1:19,0:19:41.13:244,41,0	1/1:17,2:19:52.93:358,53,0	1/1:30,0:30:52.91:403,53,0	1/1:16,0:16:20.64:140,21,0	1/1:24,0:24:54.14:436,54,0	1/1:5,1:6:17.70:113,18,0	1/1:23,2:25:29.53:312,30,0	0/0:9,0:9:26.98:0,27,349	0/0:10,0:10:27:0,27,293	0/0:17,0:17:51.10:0,51,640	1/1:5,0:5:11.75:71,12,0	1/1:19,1:19:42.51:325,43,0	1/1:14,0:13:22.33:140,22,0	1/1:2,0:2:2.94:18,3,0
chr10	64003651	.	AAAAAAAG	A	5243.06	PASS	AB=0.565;AC=39;AF=0.722;AN=54;BaseQRankSum=3.672;DP=249;FS=37.968;HRun=0;HaplotypeScore=57.2754;InbreedingCoeff=0.6384;MQ=56.73;MQ0=11;MQRankSum=-7.642;QD=32.17;ReadPosRankSum=0.721;VQSLOD=2.5546;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,8:8:24.08:428,24,0	./.	0/0:20,0:9:8.27:0,8,433	0/0:23,0:13:11.20:0,11,748	0/0:11,0:10:24.08:0,24,859	1/1:0,2:1:3.01:45,3,0	1/1:5,12:14:21.07:491,21,0	1/1:2,18:16:45.11:824,45,0	1/1:0,5:3:6.02:142,6,0	1/1:0,12:11:30.10:672,30,0	1/1:1,7:7:18.06:331,18,0	1/1:0,8:8:12.04:264,12,0	0/0:7,0:6:15.05:0,15,508	1/1:0,3:2:6.02:135,6,0	1/1:1,6:6:9.03:177,9,0	1/1:1,6:5:9.03:177,9,0	0/1:3,10:13:18.56:274,0,19	1/1:1,6:6:3.01:73,3,0	1/1:7,7:5:15.05:310,15,0	1/1:0,4:4:6.02:141,6,0	1/1:2,4:5:3.01:53,3,0	0/0:3,0:3:9.03:0,9,312	0/0:8,0:8:21.07:0,21,653	0/0:14,0:13:33.10:0,33,1052	1/1:1,2:2:3.01:72,3,0	1/1:1,3:2:3.01:73,3,0	1/1:0,8:7:21.07:488,21,0	1/1:2,4:5:3.01:72,3,0
chr10	64003676	.	CGA	C	79.57	PASS	AC=8;AF=0.190;AN=42;BaseQRankSum=0.353;DP=352;FS=22.918;HRun=0;HaplotypeScore=85.9209;InbreedingCoeff=0.4654;MQ=58.18;MQ0=12;MQRankSum=2.739;QD=2.04;ReadPosRankSum=3.445;VQSLOD=0.0581;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:25:12.04:0,12,158	./.	./.	./.	1/1:10,0:15:2.84:14,3,0	0/0:9,0:8:5.51:0,6,52	0/0:12,0:9:3.01:0,3,41	0/0:31,0:27:3.01:0,3,39	0/0:8,0:6:8.91:0,9,64	0/0:14,0:11:2.97:0,3,20	./.	0/0:9,0:9:5.92:0,6,38	1/1:6,0:7:2.83:14,3,0	./.	0/0:9,0:7:5.69:0,6,54	0/0:12,0:12:8.94:0,9,67	0/0:18,0:17:15.22:0,15,100	0/0:7,0:6:4.25:0,4,38	0/0:14,0:12:12.63:0,13,103	./.	0/0:9,0:7:6.02:0,6,72	1/1:4,0:3:3:25,3,0	./.	1/1:8,4:13:14.86:141,15,0	0/0:9,0:9:5.59:0,6,35	0/0:12,0:9:12.39:0,12,103	0/0:14,0:12:11.98:0,12,110	0/0:6,0:6:5.93:0,6,40
chr10	64005442	.	TCACA	T	5852.33	PASS	AB=0.743;AC=37;AF=0.661;AN=56;BaseQRankSum=5.435;DP=717;FS=10.611;HRun=0;HaplotypeScore=179.1697;InbreedingCoeff=0.6629;MQ=62.48;MQ0=10;MQRankSum=-4.678;QD=13.61;ReadPosRankSum=2.378;VQSLOD=3.9800;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,2:47:30.42:0,30,144	0/1:2,1:7:16.02:41,0,16	0/0:35,0:23:9.01:0,9,162	0/0:47,0:27:20.83:0,21,277	0/0:23,0:22:18.06:0,18,423	1/1:2,20:22:12.04:197,12,0	1/1:15,2:17:13.29:196,13,0	1/1:21,4:24:13.71:343,14,0	1/1:12,13:25:9.03:148,9,0	0/1:24,5:29:77.80:470,0,78	0/1:14,5:18:12.90:129,0,13	1/1:19,6:24:17.73:200,18,0	0/0:17,0:16:35.79:0,36,747	1/1:9,7:17:6:99,6,0	1/1:23,10:33:20.95:309,21,0	1/1:6,18:24:15.05:247,15,0	1/1:5,27:32:54.18:874,54,0	1/1:5,12:17:24.08:394,24,0	1/1:8,11:19:33.75:496,34,0	1/1:10,6:14:6.01:74,6,0	1/1:26,12:38:27.06:388,27,0	0/0:32,0:31:11.93:0,12,254	0/0:29,0:28:15.01:0,15,323	0/0:54,0:54:99:0,126,2753	1/1:7,13:20:9.03:148,9,0	1/1:8,17:25:44.09:708,44,0	1/1:6,8:14:23.44:342,23,0	1/1:2,1:3:3.01:49,3,0
chr10	64005505	.	GACAT	G	255.27	PASS	AB=0.907;AC=10;AF=0.179;AN=56;BaseQRankSum=5.912;DP=739;FS=16.837;HRun=0;HaplotypeScore=168.5675;InbreedingCoeff=-0.2556;MQ=35.73;MQ0=49;MQRankSum=-7.095;QD=1.20;ReadPosRankSum=-4.969;VQSLOD=-0.2671;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:33:26.78:0,27,479	0/0:4,0:4:3.01:0,3,55	0/0:43,0:8:24.06:0,24,463	0/0:57,0:12:27.08:0,27,527	0/0:18,0:17:20.82:0,21,404	0/0:13,2:15:8.88:0,9,135	0/0:32,1:30:17.90:0,18,311	0/0:44,0:25:14.90:0,15,541	0/1:14,8:22:75.55:125,0,76	0/1:30,1:25:44.03:44,0,531	0/0:13,1:13:8.95:0,9,127	0/1:19,2:19:17.04:17,0,289	0/0:28,0:25:54.03:0,54,1331	0/1:15,2:17:45.92:46,0,58	0/0:21,6:27:6.02:0,6,110	0/1:21,4:24:17.34:17,0,328	0/1:19,1:20:19.26:19,0,429	0/1:13,1:14:56.95:57,0,328	0/1:24,0:8:7.63:8,0,155	0/0:13,1:13:5.52:0,6,116	0/0:61,2:54:17.11:0,17,600	0/0:30,0:28:30.10:0,30,807	0/0:19,0:17:20.87:0,21,539	0/0:55,0:54:99:0,120,3041	0/0:24,3:23:6.02:0,6,100	0/1:19,1:18:21.05:21,0,375	0/1:14,3:17:40.05:40,0,362	0/0:1,0:1:3.01:0,3,54
chr10	64005509	.	T	TAC	4468.27	PASS	AB=0.769;AC=31;AF=0.574;AN=54;BaseQRankSum=4.419;DP=725;FS=1.259;HRun=0;HaplotypeScore=136.7672;InbreedingCoeff=0.2833;MQ=35.64;MQ0=49;MQRankSum=-1.094;QD=9.91;ReadPosRankSum=4.814;VQSLOD=4.7735;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:15,20:33:20.62:363,21,0	1/1:1,3:4:2.98:52,3,0	0/0:39,0:9:21.06:0,21,251	0/0:52,0:11:25.93:0,26,268	0/0:18,0:16:18.04:0,18,217	1/1:5,7:12:6.02:104,6,0	0/1:23,16:34:3.26:242,0,3	0/1:41,2:25:43.60:311,0,44	0/1:12,8:20:29.12:80,0,29	0/1:27,5:26:91.89:322,0,92	0/1:7,7:13:14.94:95,0,15	1/1:9,11:18:4.88:284,5,0	0/0:26,0:23:54.08:0,54,678	1/1:10,9:18:6.25:92,6,0	1/1:13,13:26:6.02:104,6,0	1/1:9,13:21:18.53:304,19,0	0/1:5,11:16:6.40:336,0,6	1/1:5,7:12:14.43:290,14,0	0/1:22,3:10:1.86:205,0,2	0/1:10,4:13:3.21:73,0,3	1/1:19,42:53:13.42:499,13,0	0/0:33,0:30:30.10:0,30,399	0/0:19,0:17:22.89:0,23,284	0/0:57,1:57:99:0,123,1585	./.	0/1:12,6:16:5.72:332,0,6	1/1:7,9:16:2.91:328,3,0	1/1:0,1:1:3.01:52,3,0
chr10	64005539	.	G	GAC	3794.15	PASS	AB=0.783;AC=34;AF=0.680;AN=50;BaseQRankSum=5.923;DP=666;FS=38.752;HRun=0;HaplotypeScore=115.6838;InbreedingCoeff=0.5793;MQ=34.55;MQ0=42;MQRankSum=-5.675;QD=9.16;ReadPosRankSum=-0.714;VQSLOD=1.0982;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	1/1:5,0:5:2.95:25,3,0	0/0:22,0:4:6.02:0,6,75	0/0:29,0:10:8.89:0,9,89	1/1:15,7:18:15.02:198,15,0	0/0:7,6:12:2.90:0,3,18	1/1:27,9:28:8.88:150,9,0	0/1:39,9:25:37.15:446,0,37	1/1:11,11:22:15.04:227,15,0	0/1:21,12:31:99:559,0,123	1/1:17,2:15:2.98:24,3,0	1/1:11,7:19:25.47:335,25,0	0/0:27,0:25:57.15:0,57,696	1/1:12,2:12:6.02:98,6,0	1/1:13,19:32:6.02:97,6,0	1/1:12,10:21:17.89:202,18,0	1/1:11,3:14:9.03:144,9,0	1/1:5,3:8:12.04:191,12,0	1/1:18,2:10:15.02:190,15,0	1/1:7,9:15:4.24:28,4,0	1/1:42,3:36:3.48:47,3,0	0/0:38,0:35:33.11:0,33,420	0/0:23,0:21:16.74:0,17,194	0/0:57,0:56:92.84:0,93,1136	./.	1/1:17,6:22:13.60:539,14,0	1/1:9,5:14:18.06:295,18,0	./.
chr10	64005547	.	CACAG	C	403.93	PASS	AB=0.972;AC=20;AF=0.370;AN=54;BaseQRankSum=4.493;DP=630;FS=19.332;HRun=0;HaplotypeScore=126.4696;InbreedingCoeff=-0.1498;MQ=33.26;MQ0=47;MQRankSum=-0.952;QD=1.10;ReadPosRankSum=-4.050;VQSLOD=-0.1840;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:15,0:11:0:0,0,0	1/1:4,1:5:3.47:26,3,0	0/0:16,0:3:6.02:0,6,123	0/0:23,0:4:9.03:0,9,188	0/1:22,0:19:33.90:34,0,107	0/0:11,0:10:2.77:0,3,18	0/0:30,0:21:8.74:0,9,158	0/1:62,0:27:7.35:7,0,411	0/1:20,0:20:13.77:14,0,106	0/1:33,1:29:38.31:38,0,676	0/0:19,0:15:0.47:0,0,1	0/1:17,2:19:51.87:52,0,120	0/0:33,0:31:65.87:0,66,1404	0/0:14,0:12:5.17:0,5,21	0/1:29,1:30:40.51:41,0,47	0/1:19,2:20:38.36:78,0,38	0/1:10,0:10:18.10:18,0,36	0/1:5,1:6:29.04:29,0,86	0/1:16,0:8:21.32:21,0,124	1/1:15,1:15:4.19:28,4,0	1/1:34,3:28:2.50:45,3,0	0/0:38,0:36:41.67:0,42,962	0/0:24,0:21:20.17:0,20,451	0/0:53,0:52:99:0,102,2397	0/1:21,0:20:0:0,0,0	0/1:23,0:22:99:106,0,323	0/1:11,0:11:12.22:12,0,121	./.
chr10	64005549	.	C	CACAG	1982.56	PASS	AB=0.861;AC=33;AF=0.611;AN=54;BaseQRankSum=8.664;DP=609;FS=38.639;HRun=0;HaplotypeScore=123.2874;InbreedingCoeff=0.4155;MQ=33.19;MQ0=46;MQRankSum=-5.150;QD=5.02;ReadPosRankSum=0.488;VQSLOD=0.5434;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:12,4:12:0:0,0,0	0/1:2,2:5:6.79:19,0,7	0/0:17,0:3:6.02:0,6,115	0/0:20,0:3:9.03:0,9,137	1/1:22,0:19:12.47:70,12,0	0/0:9,1:9:2.90:0,3,18	1/1:29,0:20:6.49:22,6,0	0/1:61,1:27:99:217,0,176	1/1:15,1:20:11.88:111,12,0	0/1:32,2:29:99:258,0,260	1/1:15,1:15:2.68:11,3,0	1/1:14,2:17:13.55:109,14,0	0/0:33,0:31:66.34:0,66,1118	1/1:8,3:10:4.04:13,4,0	1/1:24,4:28:5.23:54,5,0	1/1:14,6:20:17.70:222,18,0	1/1:7,0:7:7.45:75,7,0	1/1:5,0:5:9.95:64,10,0	1/1:11,2:7:0.26:169,0,0	1/1:15,1:15:5.49:31,5,0	1/1:28,2:22:3.95:48,4,0	0/0:39,0:38:42.05:0,42,732	0/0:25,0:22:20.79:0,21,338	0/0:51,0:50:99:0,105,1851	0/1:14,3:19:0:0,0,0	0/1:17,5:22:39.77:491,0,40	1/1:7,4:11:17.12:169,17,0	./.
chr10	64005559	.	CAT	C	120.34	PASS	AB=0.888;AC=14;AF=0.259;AN=54;BaseQRankSum=3.646;DP=558;FS=11.165;HRun=0;HaplotypeScore=105.0079;InbreedingCoeff=0.1393;MQ=32.81;MQ0=47;MQRankSum=-3.991;QD=0.75;ReadPosRankSum=-2.277;VQSLOD=0.2707;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:12,2:10:0:0,0,0	1/1:5,0:5:3:28,3,0	0/0:16,0:1:3.01:0,3,34	0/0:16,0:2:5.99:0,6,79	0/0:21,0:18:12.01:0,12,196	./.	0/0:26,0:17:8.86:0,9,173	0/0:60,0:24:49.18:0,49,618	0/0:18,2:20:9.99:0,10,193	0/1:30,1:26:41.06:41,0,689	0/1:17,0:14:0:0,0,0	0/0:9,2:11:2.30:0,2,189	0/0:30,0:28:54.15:0,54,942	0/0:10,1:9:6.02:0,6,86	0/0:26,2:28:3.01:0,3,58	0/1:13,4:15:13.93:14,0,65	0/0:5,0:5:5.73:0,6,68	0/0:4,0:4:8.94:0,9,112	0/1:11,1:6:27.99:28,0,181	1/1:11,1:12:1.72:4,2,0	0/1:19,2:13:0:0,0,0	0/0:39,0:37:39.12:0,39,718	0/0:32,1:30:31.32:0,31,545	0/0:50,0:49:99:0,105,1762	0/0:17,2:18:0.89:0,1,2	0/1:20,3:22:99:106,0,375	0/1:5,3:8:16.65:17,0,177	1/1:1,0:1:0.47:1,0,0
chr10	64005573	.	G	GAC	188.15	PASS	AB=0.980;AC=17;AF=0.354;AN=48;BaseQRankSum=5.066;DP=594;FS=6.827;HRun=0;HaplotypeScore=122.4982;InbreedingCoeff=0.2927;MQ=37.65;MQ0=43;MQRankSum=-4.621;QD=0.96;ReadPosRankSum=-3.111;VQSLOD=1.0921;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:15:0:0,0,0	1/1:8,0:8:2.66:11,3,0	./.	0/0:20,0:5:2.59:0,3,18	0/0:36,0:32:27.06:0,27,308	./.	0/0:24,0:15:3.01:0,3,33	0/0:38,0:12:4.89:0,5,73	0/1:14,0:14:0.03:0,0,0	0/1:26,1:23:38.39:89,0,38	0/1:20,0:16:0:0,0,0	0/0:12,1:13:5.73:0,6,44	0/0:29,0:28:50.29:0,50,572	./.	0/1:26,1:27:0:0,0,0	1/1:19,0:17:2.99:29,3,0	0/1:6,0:6:0:0,0,0	0/0:6,0:6:3.41:0,3,16	1/1:14,0:7:3.01:43,3,0	0/0:21,0:19:0.72:0,1,1	./.	0/0:49,0:47:41.70:0,42,510	0/0:38,0:35:26.93:0,27,338	0/0:49,0:49:93.27:0,93,1144	0/1:24,1:25:26.11:26,0,35	1/1:20,0:21:4.26:61,4,0	0/1:11,0:12:30.42:30,0,67	1/1:2,0:2:2.98:21,3,0
chr10	64005575	.	C	CAT	82.31	PASS	AB=0.954;AC=10;AF=0.179;AN=56;BaseQRankSum=4.375;DP=601;FS=1.735;HRun=0;HaplotypeScore=122.9715;InbreedingCoeff=0.1100;MQ=39.11;MQ0=44;MQRankSum=-3.765;QD=0.58;ReadPosRankSum=-2.346;VQSLOD=1.8234;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:17:0:0,0,0	0/0:7,0:7:3.93:0,4,11	0/0:17,0:3:5.96:0,6,51	0/0:22,0:5:8.40:0,8,47	0/0:38,0:34:30.09:0,30,432	0/0:12,0:13:0.47:0,0,1	0/0:22,0:13:9:0,9,95	0/0:41,0:12:26.53:0,27,177	0/0:13,0:13:5.85:0,6,36	0/0:26,0:22:0.20:0,0,241	0/1:22,0:19:0:0,0,0	0/0:16,0:16:15.75:0,16,134	0/0:29,0:27:58.13:0,58,800	0/1:9,0:8:0:0,0,0	0/0:26,1:27:2.80:0,3,24	0/1:16,1:15:11.98:42,0,12	0/0:4,0:4:5.75:0,6,36	0/0:7,0:7:2.95:0,3,37	0/1:13,1:7:36.09:36,0,109	0/1:17,2:17:0.07:0,0,0	0/0:17,0:9:0:0,0,0	0/0:50,0:48:50.70:0,51,715	0/0:38,0:35:29.93:0,30,438	0/0:51,0:50:99:0,102,1487	0/1:24,1:24:8.40:8,0,44	0/1:17,1:18:72.14:72,0,120	0/1:14,1:15:28.93:29,0,139	1/1:2,0:2:0.47:1,0,0
chr10	64005587	.	G	GAC	257.43	PASS	AB=0.914;AC=13;AF=0.241;AN=54;BaseQRankSum=3.586;DP=609;FS=6.669;HRun=0;HaplotypeScore=136.0877;InbreedingCoeff=0.0754;MQ=45.77;MQ0=38;MQRankSum=-4.325;QD=1.48;ReadPosRankSum=-2.806;VQSLOD=1.4763;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:21:0:0,0,0	0/1:9,0:9:0.01:1,0,0	0/0:21,0:5:8.49:0,8,69	0/0:31,0:9:1:0,1,6	0/0:42,0:39:36.58:0,37,432	0/0:15,0:15:6.41:0,6,55	./.	0/0:33,0:11:12:0,12,119	0/0:11,0:11:3:0,3,29	0/1:19,3:21:99:217,0,117	0/0:12,8:19:2.88:0,3,37	0/0:15,1:15:8.71:0,9,65	0/0:32,0:30:44.54:0,45,541	0/1:10,0:8:0.11:0,0,0	0/1:21,1:22:0:0,0,0	0/1:11,3:13:0.02:0,0,0	1/1:8,0:8:1.15:6,1,0	0/1:6,0:6:23.18:30,0,23	0/0:8,0:4:1.66:0,2,21	0/1:18,2:17:0.01:0,0,0	0/0:14,0:8:0:0,0,0	0/0:54,0:54:22.61:0,23,510	0/0:37,0:38:26.86:0,27,319	0/0:53,0:53:93.28:0,93,1135	0/1:26,2:27:10.48:10,0,32	0/1:13,3:15:37.07:37,0,88	0/1:13,1:14:23.76:24,0,72	0/1:3,1:4:29.44:45,0,29
chr10	64005595	.	CACACAG	C	221.37	PASS	AB=0.984;AC=11;AF=0.204;AN=54;BaseQRankSum=5.467;DP=650;FS=6.859;HRun=0;HaplotypeScore=161.2015;InbreedingCoeff=0.0406;MQ=46.84;MQ0=33;MQRankSum=-4.170;QD=1.18;ReadPosRankSum=-2.146;VQSLOD=2.0430;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,1:28:5.96:0,6,60	0/0:10,0:10:1.74:0,2,5	0/0:25,0:5:11.13:0,11,106	0/1:38,0:12:16.62:17,0,38	0/0:46,0:42:43.08:0,43,1243	0/0:16,0:15:6:0,6,129	./.	0/1:33,0:9:0.94:1,0,229	0/1:10,0:10:11.27:11,0,32	0/1:26,0:24:15.11:15,0,679	0/0:21,0:18:3.01:0,3,58	0/0:19,0:17:7.97:0,8,90	0/0:33,0:31:51.57:0,52,1618	0/1:11,0:9:0:0,0,0	0/0:20,0:20:0:0,0,1	0/0:12,0:11:2.96:0,3,19	1/1:9,3:12:7.17:92,7,0	0/1:5,1:6:7.60:142,0,8	0/1:7,0:4:11.93:12,0,88	0/1:22,0:19:0.02:0,0,0	0/0:13,1:9:2.92:0,3,17	0/0:57,0:55:53.10:0,53,1494	0/0:42,0:40:33.42:0,33,949	0/0:57,0:56:99:0,102,3112	0/0:26,1:26:2.26:0,2,108	0/1:22,0:20:53.85:54,0,234	0/0:14,0:14:4.27:0,4,143	0/0:4,0:4:9.03:0,9,170
chr10	64005599	.	CAG	C	203.83	PASS	AB=0.944;AC=15;AF=0.278;AN=54;BaseQRankSum=5.387;DP=666;FS=12.837;HRun=0;HaplotypeScore=147.3843;InbreedingCoeff=0.0297;MQ=46.31;MQ0=30;MQRankSum=-4.970;QD=0.86;ReadPosRankSum=-2.746;VQSLOD=1.4718;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:30:8.90:0,9,60	0/1:10,0:10:0:1,0,0	0/0:31,0:5:9.86:0,10,86	0/1:40,1:13:8.27:8,0,36	0/0:48,0:44:38.34:0,38,645	0/0:15,1:15:6:0,6,106	./.	0/1:38,0:14:32.91:33,0,250	0/1:7,3:10:1.63:2,0,18	0/1:26,1:25:46.91:47,0,439	0/0:22,0:19:3.01:0,3,51	0/1:19,0:17:6.88:7,0,67	0/0:32,0:30:43.70:0,44,860	0/1:9,2:9:0:0,0,0	0/0:20,1:21:0:0,0,0	0/0:12,0:11:2.95:0,3,19	1/1:11,0:11:5.08:37,5,0	1/1:5,0:5:0.50:19,0,0	0/1:6,0:4:11.93:12,0,87	0/1:22,0:19:0.08:0,0,0	0/0:9,1:7:2.92:0,3,17	0/0:52,0:54:50.08:0,50,803	0/0:43,0:42:33.27:0,33,518	0/0:58,0:57:99:0,102,1682	0/0:27,0:27:5.22:0,5,62	0/1:21,1:20:60.89:61,0,206	0/1:12,2:14:99:105,0,116	0/0:4,0:4:8.61:0,9,98
chr10	64005600	.	AGAGACC	A	635.24	PASS	AB=0.996;AC=21;AF=0.389;AN=54;BaseQRankSum=7.032;DP=652;FS=19.619;HRun=0;HaplotypeScore=156.1230;InbreedingCoeff=0.1249;MQ=46.65;MQ0=29;MQRankSum=-5.907;QD=2.21;ReadPosRankSum=-4.234;VQSLOD=-0.2045;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,2:30:8.85:0,9,80	1/1:9,1:10:3.44:11,3,0	0/0:32,0:5:13.07:0,13,137	0/1:42,0:13:8.49:8,0,104	0/0:48,0:44:42.90:0,43,927	0/0:14,0:13:5.04:0,5,127	./.	0/1:39,0:15:50:50,0,219	1/1:9,1:10:5.26:26,5,0	0/1:25,0:23:99:109,0,530	0/0:20,0:17:3.01:0,3,56	0/1:17,0:15:18.38:18,0,39	0/0:32,0:30:26.65:0,27,1255	1/1:11,0:9:3.91:22,4,0	0/1:18,0:18:0.08:0,0,1	0/1:10,0:9:0.04:0,0,14	1/1:11,0:11:13.70:150,14,0	1/1:5,0:5:12.01:159,12,0	0/1:6,0:4:13.96:14,0,59	0/1:19,0:16:0.32:0,0,0	0/0:10,0:7:2.88:0,3,15	0/0:53,1:53:46.26:0,46,1013	0/0:44,0:42:21.17:0,21,664	0/0:58,0:57:66.26:0,66,2173	0/1:27,0:27:29.30:29,0,75	0/1:22,1:21:99:100,0,188	0/1:14,0:14:82.58:94,0,83	0/0:4,0:4:9.03:0,9,163
chr10	64005602	.	AGACC	A	98.47	PASS	AB=0.984;AC=12;AF=0.222;AN=54;BaseQRankSum=7.320;DP=661;FS=20.225;HRun=0;HaplotypeScore=152.4366;InbreedingCoeff=0.0406;MQ=46.42;MQ0=29;MQRankSum=-5.414;QD=0.66;ReadPosRankSum=-2.830;VQSLOD=0.3326;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:31:8.93:0,9,116	1/1:10,0:10:3.31:15,3,0	0/0:33,0:5:14.55:0,15,183	0/0:43,0:14:15.35:0,15,132	0/0:47,0:43:39.60:0,40,742	0/0:14,0:13:5.48:0,5,123	./.	0/0:40,0:16:19.05:0,19,344	0/1:11,0:11:8.60:31,0,9	0/0:26,0:24:1.58:0,2,679	0/0:20,0:18:3.01:0,3,60	0/1:17,0:15:7.20:7,0,65	0/0:29,2:29:4.34:0,4,1013	1/1:11,0:9:3.85:22,4,0	0/0:19,1:20:2.14:0,2,7	0/0:10,0:9:2.88:0,3,36	0/1:11,0:11:18.19:26,0,18	0/1:5,0:5:5.89:15,0,6	0/0:6,0:4:4.75:0,5,79	0/1:19,0:16:0.21:0,0,0	0/0:11,0:7:3.01:0,3,33	0/0:51,3:53:50.09:0,50,827	0/0:44,1:43:32.67:0,33,546	0/0:57,2:59:99:0,102,1767	0/1:27,0:27:14.71:15,0,52	0/1:24,0:22:13.90:14,0,327	0/1:12,2:14:86.38:86,0,145	0/0:4,0:4:9.03:0,9,132
chr10	64005603	.	GACCCAGACATACAC	G	713.98	PASS	AB=0.967;AC=20;AF=0.357;AN=56;BaseQRankSum=4.478;DP=666;FS=12.905;HRun=0;HaplotypeScore=194.3928;InbreedingCoeff=-0.1989;MQ=46.25;MQ0=30;MQRankSum=-3.437;QD=2.01;ReadPosRankSum=-2.968;VQSLOD=1.0596;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,1:31:7.24:0,7,111	1/1:10,0:10:0.94:3,1,0	0/1:33,0:5:36.13:36,0,62	0/1:44,0:14:1.84:2,0,180	0/0:46,0:42:37.46:0,37,1101	0/1:13,1:13:3.55:4,0,79	0/0:15,0:15:3.01:0,3,54	0/0:40,0:16:7.91:0,8,513	1/1:11,0:11:0.42:66,0,0	0/1:26,0:24:99:103,0,661	0/0:20,0:18:3.48:0,3,46	0/1:16,1:15:20.81:56,0,21	0/0:30,0:28:48.81:0,49,1546	0/0:12,0:10:4.90:0,5,55	0/0:20,0:20:3.93:0,4,12	0/0:10,0:9:2.97:0,3,22	0/1:10,1:11:16.26:16,0,92	0/1:4,1:5:36.11:116,0,36	1/1:5,0:4:5.50:41,6,0	1/1:19,0:17:0.10:0,0,0	0/0:11,0:7:2.96:0,3,19	0/1:55,0:54:27.92:28,0,1158	0/0:46,0:44:4.08:0,4,436	0/1:59,0:59:59.80:60,0,2625	0/0:27,0:28:2.46:0,2,74	0/1:24,0:22:99:100,0,374	0/1:15,0:15:46.29:214,0,46	0/1:5,0:5:7.68:8,0,131
chr10	64005613	.	T	TAC	584.45	PASS	AB=0.907;AC=19;AF=0.339;AN=56;BaseQRankSum=4.745;DP=721;FS=19.214;HRun=0;HaplotypeScore=151.6622;InbreedingCoeff=0.0431;MQ=42.32;MQ0=36;MQRankSum=-5.283;QD=2.07;ReadPosRankSum=-1.834;VQSLOD=1.3205;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:33:9:0,9,80	0/1:10,0:10:0.01:0,0,0	0/0:37,0:5:2.98:0,3,21	0/0:49,0:14:21.89:0,22,194	0/0:48,0:43:35.49:0,35,458	0/1:14,1:14:7.24:7,0,26	0/0:18,1:18:3.01:0,3,39	0/1:51,1:26:36.15:36,0,624	0/1:5,5:10:15.32:42,0,15	0/1:27,3:27:99:174,0,450	0/1:22,1:21:0.13:0,0,0	0/1:13,4:15:29.02:59,0,29	0/0:37,0:34:55.51:0,56,775	0/1:11,1:10:0.38:0,0,21	1/1:14,2:17:0.47:2,0,0	1/1:9,0:8:5.81:60,6,0	0/0:11,0:11:17.48:0,17,196	0/1:5,0:5:4.25:4,0,105	0/0:10,0:4:6.89:0,7,65	1/1:25,2:23:3.01:51,3,0	1/1:13,1:8:2.84:14,3,0	0/0:59,0:58:37.11:0,37,466	0/0:45,0:42:26.82:0,27,301	0/0:50,0:51:84.24:0,84,1065	0/0:29,1:30:1.53:0,2,36	0/1:26,1:25:54.70:55,0,276	0/1:11,3:14:51.09:220,0,51	0/0:5,0:5:2.44:0,2,74
chr10	64005623	.	G	GAC	834.96	PASS	AB=0.849;AC=19;AF=0.352;AN=54;BaseQRankSum=4.679;DP=787;FS=17.147;HRun=0;HaplotypeScore=148.8755;InbreedingCoeff=-0.0749;MQ=36.51;MQ0=52;MQRankSum=-2.597;QD=2.75;ReadPosRankSum=1.618;VQSLOD=1.2610;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,8:35:9.03:0,9,112	0/1:8,1:9:0:0,0,0	./.	0/1:59,0:12:6.32:6,0,98	0/0:49,0:47:32.48:0,32,413	0/1:8,6:13:28.79:89,0,29	0/1:21,5:24:2.30:2,0,40	0/0:64,0:31:60.11:0,60,780	0/1:8,1:9:1.18:1,0,48	0/1:29,6:32:99:312,0,475	0/1:22,3:23:11.93:44,0,12	0/1:12,4:14:27.14:55,0,27	0/0:37,0:35:56.47:0,56,643	0/1:6,6:10:14.10:14,0,21	1/1:14,3:17:0.47:2,0,0	1/1:5,3:7:11.62:127,12,0	0/0:11,0:11:18.74:0,19,185	0/1:5,0:5:6.13:6,0,100	0/0:17,0:4:6.02:0,6,75	0/0:26,3:25:2.76:0,3,34	1/1:13,2:9:3.01:49,3,0	0/0:57,0:60:31.10:0,31,365	0/0:42,0:45:17.80:0,18,192	0/0:48,0:49:72.05:0,72,853	0/0:27,4:31:2.99:0,3,38	0/1:27,3:28:99:122,0,329	0/1:10,4:14:14.03:110,0,14	0/1:4,1:5:38.85:39,0,68
chr10	64005645	.	G	GACAC	377.18	PASS	AB=0.981;AC=14;AF=0.259;AN=54;BaseQRankSum=2.461;DP=766;FS=12.824;HRun=0;HaplotypeScore=146.1875;InbreedingCoeff=-0.0197;MQ=28.55;MQ0=68;MQRankSum=-4.162;QD=1.84;ReadPosRankSum=1.385;VQSLOD=2.0825;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:38:20.70:0,21,345	0/0:10,0:10:2.95:0,3,55	./.	0/0:58,0:5:8.94:0,9,97	0/0:47,0:44:23.37:0,23,406	0/0:12,1:12:5.49:0,5,105	1/1:27,1:23:7.46:51,7,0	0/0:65,0:29:62.40:0,62,871	0/1:9,1:10:56.99:57,0,95	0/1:39,0:35:99:212,0,517	0/0:21,0:18:6.02:0,6,95	0/1:14,1:14:16.84:17,0,72	0/0:30,0:28:52.84:0,53,793	0/1:12,0:10:23.93:24,0,30	1/1:16,0:16:1.55:4,2,0	0/0:8,0:7:4.80:0,5,55	0/1:10,0:10:18.98:19,0,72	0/0:5,0:5:6.83:0,7,70	0/0:19,0:6:11.97:0,12,129	0/0:26,0:23:1.82:0,2,37	0/0:16,0:11:3:0,3,28	0/0:53,0:52:20.72:0,21,254	0/0:41,0:39:20.75:0,21,273	0/0:43,0:43:59.95:0,60,913	1/1:27,1:28:1.21:22,1,0	0/1:25,0:24:44.38:44,0,367	0/1:14,0:14:11.01:11,0,250	0/1:8,0:6:39.78:59,0,40
chr10	64005647	.	CAT	C	205.04	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=2.613;DP=743;FS=17.182;HRun=0;HaplotypeScore=132.0962;InbreedingCoeff=0.0765;MQ=28.43;MQ0=67;MQRankSum=-3.073;QD=0.92;ReadPosRankSum=0.228;VQSLOD=1.5064;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:38:20.85:0,21,364	0/0:9,0:9:1.51:0,2,44	0/1:62,0:1:0:0,0,0	0/0:56,0:5:9:0,9,125	0/0:46,0:43:24.05:0,24,377	0/0:13,0:12:3.67:0,4,108	1/1:24,3:22:5.17:29,5,0	0/0:57,0:27:45.91:0,46,858	0/0:9,0:9:5.07:0,5,54	0/1:39,0:35:99:153,0,442	0/0:21,0:18:6.02:0,6,96	0/0:15,0:14:4.50:0,4,72	0/0:29,0:27:46.83:0,47,695	0/1:12,0:10:11.20:11,0,12	0/0:15,0:15:1.82:0,2,6	0/1:8,0:7:11.88:12,0,14	0/0:10,0:10:15.55:0,16,124	0/0:5,0:5:9.71:0,10,57	0/0:19,0:6:14.90:0,15,147	0/0:25,0:23:2.24:0,2,22	0/0:16,0:11:3:0,3,26	0/0:50,3:52:20.87:0,21,243	0/0:40,0:38:20.79:0,21,310	0/0:39,2:41:59.89:0,60,865	1/1:28,0:28:2.99:25,3,0	0/1:24,0:23:63.14:63,0,303	0/1:14,0:14:18.20:18,0,118	0/1:8,0:6:26.03:26,0,82
chr10	64005657	.	CAG	C	67.51	PASS	AB=0.996;AC=13;AF=0.250;AN=52;BaseQRankSum=1.087;DP=666;FS=8.982;HRun=0;HaplotypeScore=124.5820;InbreedingCoeff=0.1307;MQ=27.75;MQ0=63;MQRankSum=-2.401;QD=0.36;ReadPosRankSum=0.060;VQSLOD=1.2391;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,1:35:20.78:0,21,261	0/0:9,0:9:3.26:0,3,21	./.	0/0:46,0:3:4.96:0,5,23	0/0:41,0:38:14.81:0,15,179	0/0:13,0:12:4.08:0,4,41	1/1:24,2:21:1.51:15,2,0	0/0:53,0:22:21.86:0,22,349	0/0:9,0:9:1.69:0,2,23	0/1:31,0:29:52.35:52,0,249	0/0:20,0:17:3:0,3,25	0/0:13,0:13:6.41:0,6,48	0/0:27,0:25:41.61:0,42,547	1/1:11,0:9:1.42:15,1,0	1/1:9,0:12:2.29:11,2,0	0/1:4,0:4:9.52:10,0,11	0/0:9,0:10:15.16:0,15,96	0/0:4,0:4:8.36:0,8,57	0/0:17,0:6:14.90:0,15,109	0/0:21,3:22:2.93:0,3,18	./.	0/1:47,1:47:9.83:10,0,49	0/0:32,1:32:15.24:0,15,232	0/0:36,1:38:41.72:0,42,498	1/1:22,2:25:2.99:25,3,0	0/1:22,0:21:36.04:36,0,158	0/0:14,0:14:5.70:0,6,121	0/1:8,0:6:25.59:26,0,26
chr10	64005659	.	G	GAC	213.84	PASS	AB=0.981;AC=23;AF=0.460;AN=50;BaseQRankSum=3.799;DP=627;FS=6.290;HRun=0;HaplotypeScore=122.7979;InbreedingCoeff=0.1266;MQ=27.65;MQ0=62;MQRankSum=-3.146;QD=0.75;ReadPosRankSum=1.854;VQSLOD=1.8386;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:33:11.81:0,12,86	0/0:9,0:9:2.82:0,3,27	./.	0/0:44,0:2:2.80:0,3,13	0/1:37,0:36:14.29:14,0,63	1/1:10,1:12:2.04:6,2,0	0/0:24,1:20:0.64:0,1,19	0/0:50,0:18:1.81:0,2,18	0/1:8,1:9:32.43:35,0,32	0/1:29,1:27:64.98:110,0,65	./.	1/1:12,1:12:2.93:26,3,0	0/0:26,0:24:24.88:0,25,235	1/1:10,0:9:0.47:1,0,0	1/1:12,0:12:2.98:21,3,0	1/1:2,0:3:0.88:20,1,0	1/1:11,0:10:6.11:35,6,0	0/1:4,0:4:0:0,0,0	1/1:14,0:5:2.37:8,2,0	0/1:21,0:19:0:0,0,0	./.	0/1:49,0:48:0:0,0,0	0/0:30,0:29:8.99:0,9,107	0/0:36,0:36:12.02:0,12,132	0/1:23,1:24:0:0,0,0	0/1:22,0:21:20.82:49,0,21	0/1:11,0:12:12.91:13,0,59	0/0:8,0:6:1.62:0,2,20
chr10	64005663	.	C	CAG	109.79	PASS	AB=0.970;AC=15;AF=0.300;AN=50;BaseQRankSum=4.009;DP=565;FS=5.292;HRun=0;HaplotypeScore=114.0386;InbreedingCoeff=0.0485;MQ=27.14;MQ0=54;MQRankSum=-2.433;QD=0.60;ReadPosRankSum=3.355;VQSLOD=1.8061;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:29:17.85:0,18,184	0/0:7,0:7:3.48:0,3,45	./.	0/0:40,0:2:6:0,6,57	0/0:37,0:34:6.29:0,6,93	1/1:11,0:10:1.42:4,1,0	0/0:24,0:19:2.69:0,3,33	0/0:39,0:12:23.84:0,24,185	0/1:8,0:8:13.34:13,0,63	0/1:24,0:21:35.53:36,0,148	./.	0/1:12,1:12:11.05:37,0,11	0/0:26,0:24:34.62:0,35,405	0/0:11,0:9:2.22:0,2,10	1/1:9,3:12:3.01:36,3,0	0/1:4,0:4:0.71:1,0,15	0/1:9,2:10:4.41:67,0,4	0/1:4,0:4:6.81:12,0,7	0/1:11,0:3:18.95:20,0,19	0/0:20,0:18:2.80:0,3,17	./.	1/1:44,1:44:0.94:2,1,0	0/0:31,0:30:11.21:0,11,158	0/0:32,2:34:32.69:0,33,335	0/1:19,1:20:0.02:0,0,0	0/1:19,0:18:4.66:5,0,153	0/0:11,0:11:14.93:0,15,147	0/0:7,0:5:10.43:0,10,63
chr10	64005671	.	C	CAGAG	114.28	PASS	AB=0.987;AC=18;AF=0.360;AN=50;BaseQRankSum=3.435;DP=450;FS=3.432;HRun=0;HaplotypeScore=92.2748;InbreedingCoeff=0.2905;MQ=27.56;MQ0=41;MQRankSum=-0.625;QD=0.53;ReadPosRankSum=-2.170;VQSLOD=1.1796;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:23:13.34:0,13,264	0/0:4,0:4:2.80:0,3,58	./.	0/0:27,0:2:6.01:0,6,67	0/1:34,1:32:13.43:13,0,110	1/1:8,0:7:3.01:39,3,0	0/0:17,0:12:5.81:0,6,40	0/1:33,0:10:13.73:14,0,196	0/1:8,0:8:6.35:6,0,10	0/0:20,0:17:34.28:0,34,280	./.	1/1:11,0:10:3.68:26,4,0	0/0:21,3:22:32.57:0,33,602	0/0:10,0:8:3.01:0,3,34	1/1:10,0:10:2.70:8,3,0	0/1:4,0:4:5.55:45,0,6	1/1:10,0:9:12.32:89,12,0	0/0:3,0:3:5.03:0,5,28	0/0:7,0:2:0.47:0,0,1	1/1:18,0:16:1.25:3,1,0	./.	0/1:36,2:37:0:0,0,0	0/0:27,2:28:11.26:0,11,226	0/1:29,0:29:1.51:2,0,312	1/1:13,0:13:0.75:2,1,0	0/0:13,0:12:24.35:0,24,221	0/0:8,0:8:11.58:0,12,87	0/0:4,0:3:7.53:0,8,59
chr10	64005674	.	A	AGG	191.52	PASS	AB=0.875;AC=11;AF=0.229;AN=48;BaseQRankSum=3.307;DP=390;FS=2.313;HRun=0;HaplotypeScore=75.8027;InbreedingCoeff=0.0993;MQ=28.23;MQ0=31;MQRankSum=-2.670;QD=2.66;ReadPosRankSum=-0.065;VQSLOD=1.6197;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:21:12.04:0,12,193	0/0:2,0:2:3.48:0,3,49	./.	0/0:20,0:1:3:0,3,26	0/0:34,0:31:8.60:0,9,123	1/1:6,0:5:0.80:2,1,0	0/0:14,2:11:3.65:0,4,52	0/0:27,0:8:20.98:0,21,229	0/0:6,0:6:0.53:0,1,36	0/1:16,3:17:99:148,0,207	./.	0/0:8,0:8:4.32:0,4,13	0/0:23,1:22:34.76:0,35,477	0/0:5,0:4:3.48:0,3,32	0/0:5,3:8:1.31:0,1,12	1/1:2,1:3:1:57,1,0	0/0:9,0:8:6.27:0,6,71	0/0:2,0:2:2.04:0,2,6	0/0:5,0:2:3.01:0,3,32	1/1:13,2:13:0.89:2,1,0	./.	./.	0/0:27,0:26:11.11:0,11,189	0/0:28,0:28:18.04:0,18,261	1/1:10,1:11:0.89:2,1,0	0/1:12,1:11:32.44:32,0,264	0/1:4,1:5:49.91:52,0,50	0/0:4,0:3:6.02:0,6,73
chr10	64009516	.	T	TA	10527.12	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-5.335;DP=573;FS=2.440;HRun=10;HaplotypeScore=61.1679;InbreedingCoeff=0.9656;MQ=59.25;MQ0=1;MQRankSum=-1.133;QD=21.18;ReadPosRankSum=-0.574;VQSLOD=5.6398;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,2:36:74.13:389,74,0	1/1:2,0:7:17.04:85,17,0	0/0:6,0:3:8.99:0,9,74	0/0:7,0:5:11.97:0,12,98	1/1:7,0:32:58.90:323,59,0	1/1:3,22:25:60.15:640,60,0	1/1:4,21:25:19.88:623,20,0	1/1:4,1:28:67.10:365,67,0	1/1:1,15:16:42.99:450,43,0	1/1:5,32:37:93.23:991,93,0	1/1:6,17:23:39.10:415,39,0	1/1:3,13:16:33.08:352,33,0	0/0:14,0:14:26.93:0,27,221	1/1:2,16:18:39.10:416,39,0	1/1:7,27:34:84.20:890,84,0	1/1:2,12:14:30.07:319,30,0	1/1:3,25:28:68.59:732,69,0	1/1:6,17:23:54.11:566,54,0	1/1:5,13:18:14.45:359,14,0	1/1:3,30:35:80.87:827,81,0	1/1:2,7:10:20.89:206,21,0	0/0:12,0:12:23.95:0,24,197	0/0:14,0:14:32.94:0,33,270	0/0:22,0:22:37.24:0,37,424	1/1:3,12:15:11.45:327,11,0	1/1:4,18:22:32.51:551,33,0	1/1:6,18:24:42.11:447,42,0	1/1:3,7:10:24.06:256,24,0
chr10	64010037	.	A	ACTCCCCTCC	178.71	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-0.243;DP=319;FS=4.220;HRun=0;HaplotypeScore=107.6846;InbreedingCoeff=0.6041;MQ=84.64;MQ0=3;MQRankSum=-2.919;QD=8.94;ReadPosRankSum=0.126;VQSLOD=1.9136;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:6,5:11:6.02:212,6,0	1/1:4,0:4:3.01:64,3,0	0/0:25,0:16:6.05:0,6,93	0/0:34,0:20:28.64:0,29,394	0/0:4,0:4:6.02:0,6,171	0/0:6,0:6:18.06:0,18,464	0/0:14,0:14:24.03:0,24,426	0/0:15,0:15:15.05:0,15,399	0/0:9,0:9:15.59:0,16,506	0/0:11,0:11:21.07:0,21,586	0/0:6,0:6:12.03:0,12,254	0/0:7,0:7:15.05:0,15,382	0/0:13,0:13:26.92:0,27,622	0/0:16,0:16:30.06:0,30,731	0/0:5,0:5:6.02:0,6,171	0/0:15,0:15:32.83:0,33,740	0/0:12,0:12:12.04:0,12,307	0/0:10,0:10:18.06:0,18,443	0/0:7,0:7:12.04:0,12,316	0/0:10,0:10:18.06:0,18,472	0/0:28,0:28:54.19:0,54,1419	0/0:11,0:11:21.06:0,21,502	0/0:3,0:3:9.03:0,9,179	0/0:11,0:11:30.10:0,30,767	0/0:14,0:14:33.11:0,33,874	0/0:4,0:4:9.03:0,9,236	0/0:8,0:8:24.08:0,24,575	1/1:5,0:5:0.47:1,0,0
chr10	64012071	.	G	GT	1037.25	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-3.228;DP=641;FS=0.000;HRun=7;HaplotypeScore=107.5024;InbreedingCoeff=0.9823;MQ=66.08;MQ0=4;MQRankSum=-0.050;QD=23.57;ReadPosRankSum=2.114;VQSLOD=3.0339;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,30:31:69.21:833,69,0	1/1:1,12:13:27.08:326,27,0	0/0:26,0:17:37.76:0,38,330	0/0:15,0:8:12.01:0,12,114	0/0:27,0:27:81.10:0,81,771	0/0:20,0:20:45.05:0,45,429	0/0:12,0:12:30.05:0,30,290	0/0:39,0:39:99:0,99,949	0/0:16,0:16:42.05:0,42,400	0/0:23,0:23:60.09:0,60,579	0/0:28,0:28:75.10:0,75,716	0/0:19,0:19:48.04:0,48,452	0/0:18,0:18:44.98:0,45,417	0/0:19,0:19:54.07:0,54,517	0/0:25,0:25:66.08:0,66,627	0/0:28,0:28:78.08:0,78,736	0/0:29,0:29:66.06:0,66,629	0/0:18,0:18:39.01:0,39,367	0/0:28,0:27:57.06:0,57,540	0/0:33,0:33:93.10:0,93,880	0/0:10,0:10:27.03:0,27,254	0/0:15,0:15:39.06:0,39,376	0/0:21,0:21:57.06:0,57,543	0/0:10,0:10:27.02:0,27,255	0/0:35,0:35:90.13:0,90,865	0/0:35,0:35:96.07:0,96,914	0/0:31,0:30:90.08:0,90,857	0/0:17,0:17:45.07:0,45,434
chr10	64012688	.	AT	A	1870.17	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-1.387;DP=430;FS=15.713;HRun=3;HaplotypeScore=57.6862;InbreedingCoeff=0.9712;MQ=82.34;MQ0=0;MQRankSum=-0.149;QD=32.81;ReadPosRankSum=1.271;VQSLOD=2.1726;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,31:32:90.28:1115,90,0	1/1:0,3:3:9.03:112,9,0	0/0:14,0:14:39.10:0,39,523	0/0:13,0:13:36.11:0,36,486	1/1:0,22:22:63.20:780,63,0	0/0:23,0:23:69.23:0,69,987	0/0:17,0:17:48.16:0,48,690	0/0:17,0:17:48.16:0,48,691	0/0:17,0:17:51.16:0,51,718	0/0:15,0:15:45.15:0,45,648	0/0:12,0:12:36.12:0,36,517	0/0:15,0:15:45.14:0,45,628	0/0:18,0:18:54.18:0,54,777	0/0:10,0:10:30.10:0,30,430	0/0:10,0:10:30.10:0,30,432	0/0:17,0:17:51.17:0,51,734	0/0:24,0:24:66.11:0,66,923	0/0:16,0:16:39.13:0,39,561	0/0:14,0:14:36.11:0,36,503	0/0:14,0:14:42.14:0,42,604	0/0:19,0:19:54.16:0,54,758	0/0:7,0:7:21.07:0,21,302	0/0:5,0:5:15.05:0,15,216	0/0:14,0:14:42.14:0,42,603	0/0:19,0:19:54.18:0,54,776	0/0:18,0:18:51.17:0,51,734	0/0:14,0:14:42.10:0,42,578	0/0:11,0:10:33.11:0,33,472
chr10	64012819	.	GAAA	G	5812.41	PASS	AB=0.722;AC=29;AF=0.518;AN=56;BaseQRankSum=4.554;DP=373;FS=1.509;HRun=7;HaplotypeScore=83.0687;InbreedingCoeff=0.3092;MQ=44.68;MQ0=11;MQRankSum=-5.650;QD=22.97;ReadPosRankSum=4.424;VQSLOD=1.6883;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:20:50.36:0,50,624	0/0:10,0:10:14.88:0,15,139	0/0:9,0:3:8.98:0,9,76	0/1:20,0:5:0.70:1,0,41	0/0:25,0:25:48.12:0,48,571	1/1:5,10:15:3.33:504,3,0	1/1:0,13:13:30.10:454,30,0	0/0:22,0:22:58.47:0,58,617	1/1:6,4:10:18.06:272,18,0	0/1:8,4:11:54.78:240,0,55	0/1:4,20:23:3.75:571,0,4	1/1:3,6:9:2.36:294,2,0	0/0:12,0:11:26.76:0,27,453	1/1:0,9:9:18.06:271,18,0	1/1:4,5:8:18.06:273,18,0	0/1:5,11:16:60.44:239,0,60	0/1:9,11:17:33.48:251,0,33	0/1:8,1:8:3.28:227,0,3	0/1:6,11:17:18.24:377,0,18	1/1:2,8:10:7.70:317,8,0	1/1:2,1:3:6.02:91,6,0	0/0:9,0:9:24.08:0,24,432	0/0:7,0:6:12.04:0,12,222	0/0:5,0:5:12.04:0,12,264	1/1:2,11:12:7.69:344,8,0	1/1:6,15:19:3.41:632,3,0	0/1:7,11:17:19.98:415,0,20	0/1:4,1:3:15.03:39,0,15
chr10	64012822	.	A	AAG	4531.82	PASS	AB=0.943;AC=25;AF=0.446;AN=56;BaseQRankSum=5.488;DP=374;FS=0.935;HRun=0;HaplotypeScore=85.0538;InbreedingCoeff=0.1816;MQ=47.72;MQ0=8;MQRankSum=-5.494;QD=19.12;ReadPosRankSum=5.345;VQSLOD=4.9296;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:21:54.15:0,54,682	0/0:7,0:7:14.94:0,15,176	0/0:10,0:4:11.82:0,12,90	0/0:20,0:5:6.01:0,6,74	0/0:23,0:23:48.16:0,48,728	0/1:12,3:15:14.78:355,0,15	1/1:13,0:13:30.06:388,30,0	0/0:23,0:23:61.69:0,62,795	1/1:4,6:10:18.02:217,18,0	0/1:10,3:12:81.69:215,0,82	0/1:23,0:23:43.43:451,0,43	1/1:8,2:11:2.20:236,2,0	0/0:11,0:11:26.92:0,27,371	1/1:10,0:10:18.03:230,18,0	1/1:6,3:8:18:195,18,0	0/1:16,0:16:93.31:164,0,93	0/1:19,0:17:99:216,0,108	1/1:5,4:8:13.50:191,13,0	0/1:18,0:18:65.71:304,0,66	0/1:10,0:10:2.64:308,0,3	1/1:1,1:2:6:70,6,0	0/0:8,0:8:24.08:0,24,366	0/0:7,0:6:12.04:0,12,184	0/0:6,0:6:12.04:0,12,184	0/1:13,0:12:2.98:255,0,3	0/1:20,1:19:59.63:457,0,60	0/1:15,6:20:69.79:244,0,70	0/1:4,0:3:36.42:36,0,54
chr10	64013112	.	GGACGAGCAGCCCA	G	30141.08	PASS	AB=0.579;AC=35;AF=0.625;AN=56;BaseQRankSum=17.166;DP=669;FS=1.883;HRun=0;HaplotypeScore=251.2051;InbreedingCoeff=0.9226;MQ=84.01;MQ0=0;MQRankSum=-17.579;QD=70.92;ReadPosRankSum=7.030;VQSLOD=4.1860;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,129,8241	0/0:8,0:8:21.07:0,21,1323	0/0:30,0:30:87.30:0,87,5059	0/0:29,0:29:87.16:0,87,4772	0/0:26,0:26:66.20:0,66,3768	1/1:1,23:24:51.18:2082,51,0	1/1:5,18:23:30.10:1224,30,0	0/0:29,0:29:87.30:0,87,4442	1/1:3,25:28:50.84:2080,51,0	1/1:2,24:26:57.19:2214,57,0	1/1:1,15:16:24.08:914,24,0	1/1:2,20:22:42.62:1714,43,0	0/0:20,0:20:60.21:0,60,3657	1/1:3,14:18:33.11:1346,33,0	1/1:3,21:24:48.16:1905,48,0	1/1:1,35:36:78.27:3183,78,0	1/1:4,26:30:54.18:2087,54,0	0/1:6,16:22:16.35:1073,0,16	1/1:3,29:32:74.91:2132,75,0	1/1:0,17:17:42.14:1683,42,0	1/1:6,22:28:21.07:658,21,0	0/0:12,0:12:33.11:0,33,2105	0/0:12,0:12:30.10:0,30,1835	0/0:34,0:34:99:0,102,6037	1/1:2,17:19:36.12:1469,36,0	1/1:3,16:19:39.09:1488,39,0	1/1:7,26:33:53.85:2154,54,0	1/1:2,6:8:18.06:736,18,0
chr10	64013554	.	GA	G	4621.51	PASS	AB=0.736;AC=41;AF=0.788;AN=52;BaseQRankSum=-2.394;DP=505;FS=11.877;HRun=9;HaplotypeScore=82.5136;InbreedingCoeff=0.6168;MQ=42.26;MQ0=42;MQRankSum=-2.496;QD=10.87;ReadPosRankSum=2.731;VQSLOD=2.7804;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:23,21:40:48.62:468,49,0	1/1:3,1:4:2.58:27,3,0	./.	./.	1/1:10,11:20:17.31:161,17,0	1/1:4,10:13:27.01:246,27,0	1/1:16,6:18:17.81:161,18,0	1/1:5,11:15:33.01:302,33,0	1/1:7,12:19:25.54:220,26,0	1/1:11,7:17:29.94:264,30,0	1/1:8,13:18:20.87:191,21,0	0/1:12,10:21:3.66:143,0,4	0/0:8,0:8:9.43:0,9,88	1/1:7,12:17:32.97:300,33,0	1/1:9,8:16:20.78:191,21,0	1/1:11,20:31:50.88:465,51,0	1/1:22,12:28:28.74:319,29,0	0/1:10,5:13:42.56:65,0,43	1/1:7,3:8:11.99:108,12,0	1/1:8,6:13:20.93:184,21,0	1/1:4,7:10:9:82,9,0	0/0:15,0:12:18.02:0,18,180	0/0:13,0:13:24.54:0,25,277	0/0:38,0:32:36.03:0,36,377	1/1:15,8:22:29.64:253,30,0	1/1:9,7:16:20.72:191,21,0	0/1:14,6:16:9.91:116,0,10	1/1:8,6:11:17.99:164,18,0
chr10	64014211	.	CAT	C	3511.48	PASS	AB=1.000;AC=36;AF=0.720;AN=50;BaseQRankSum=5.796;DP=227;FS=11.596;HRun=0;HaplotypeScore=39.4877;InbreedingCoeff=0.5903;MQ=80.23;MQ0=0;MQRankSum=-0.974;QD=20.90;ReadPosRankSum=5.290;VQSLOD=2.4534;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:24.07:0,24,365	0/0:1,0:1:3.01:0,3,50	0/1:5,0:4:2.97:3,0,4	0/1:21,0:13:6.14:6,0,43	0/0:0,0:3:6:0,6,53	1/1:2,7:9:15.05:191,15,0	0/0:0,1:1:0:0,0,0	0/0:40,0:40:87.30:0,87,1427	1/1:0,4:4:6.02:76,6,0	1/1:0,7:7:21.07:265,21,0	1/1:0,3:3:6.02:76,6,0	1/1:0,2:2:6.02:76,6,0	0/0:2,0:2:6.02:0,6,100	1/1:0,5:5:12.04:153,12,0	1/1:2,1:3:2.42:37,2,0	1/1:0,2:2:6.02:76,6,0	1/1:7,16:23:24.08:302,24,0	1/1:3,16:19:33.11:420,33,0	1/1:3,11:14:30.10:380,30,0	1/1:1,3:4:9.03:115,9,0	1/1:1,1:2:3.01:38,3,0	./.	./.	./.	1/1:1,11:12:27.09:344,27,0	1/1:0,4:4:12.04:153,12,0	1/1:1,7:8:21.07:267,21,0	1/1:5,15:20:42.13:534,42,0
chr10	64015351	.	C	CG	561.52	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-5.062;DP=485;FS=4.963;HRun=5;HaplotypeScore=48.4420;InbreedingCoeff=0.8305;MQ=66.16;MQ0=8;MQRankSum=-1.222;QD=26.74;ReadPosRankSum=-3.950;VQSLOD=1.5019;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,105,1118	0/0:5,0:5:9.02:0,9,97	0/0:10,0:7:12.02:0,12,129	0/0:12,0:10:20.87:0,21,218	0/0:14,0:14:36.09:0,36,387	0/0:21,0:21:63.16:0,63,677	0/0:17,0:17:45.10:0,45,475	1/1:3,18:20:51.15:656,51,0	0/0:15,0:15:39.10:0,39,419	0/0:13,0:13:36.08:0,36,379	0/0:11,0:11:30.08:0,30,322	0/0:22,0:22:63.16:0,63,677	0/0:9,0:9:24.06:0,24,258	0/0:14,0:14:42.11:0,42,451	0/0:29,0:29:78.18:0,78,830	0/0:17,0:17:48.12:0,48,516	0/0:38,0:39:99:0,114,1203	0/0:23,0:23:60.15:0,60,645	0/0:13,0:13:36.09:0,36,387	0/0:10,0:10:27.07:0,27,290	0/0:18,0:17:42.10:0,42,451	0/0:16,0:14:33.08:0,33,355	0/0:13,0:13:36.09:0,36,387	0/0:28,0:27:69.17:0,69,741	0/0:17,0:16:42.11:0,42,451	0/0:18,0:18:48.12:0,48,516	0/0:17,0:17:51.13:0,51,548	0/0:2,0:2:6.01:0,6,64
chr10	64015806	.	G	GA	4895.19	PASS	AB=0.753;AC=38;AF=0.679;AN=56;BaseQRankSum=-4.831;DP=518;FS=0.460;HRun=12;HaplotypeScore=68.9740;InbreedingCoeff=0.4040;MQ=59.59;MQ0=8;MQRankSum=-0.372;QD=11.15;ReadPosRankSum=-0.480;VQSLOD=4.2649;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:24,3:28:26.29:26,0,291	0/0:9,0:9:17.82:0,18,127	0/1:14,0:9:19.64:20,0,35	0/0:10,0:5:0.40:0,0,1	1/1:3,0:18:37.13:192,37,0	1/1:11,5:17:7.42:193,7,0	0/1:8,28:38:10.19:393,0,10	1/1:10,14:26:1.70:302,2,0	1/1:6,14:21:7.82:265,8,0	1/1:5,12:18:22.28:231,22,0	0/1:6,0:6:12.95:32,0,13	1/1:4,18:25:29.24:247,29,0	0/0:15,0:17:35.18:0,35,240	1/1:6,9:15:20.95:192,21,0	0/1:3,11:16:20.81:160,0,21	1/1:5,13:18:8.15:239,8,0	0/1:13,26:39:65.67:402,0,66	1/1:7,26:35:18.37:519,18,0	1/1:6,10:15:29.05:238,29,0	1/1:3,8:11:14.99:137,15,0	1/1:3,10:13:26.99:253,27,0	0/0:10,0:11:14.83:0,15,108	0/0:9,0:9:14.84:0,15,107	0/0:20,2:22:18.28:0,18,298	1/1:2,8:8:12.02:117,12,0	1/1:8,11:20:30.40:301,30,0	1/1:7,12:19:27.04:263,27,0	1/1:10,0:9:20.96:174,21,0
chr10	64017000	.	C	CA	132.01	PASS	AB=0.931;AC=8;AF=0.143;AN=56;BaseQRankSum=0.201;DP=594;FS=8.547;HRun=14;HaplotypeScore=128.1485;InbreedingCoeff=0.1835;MQ=66.23;MQ0=13;MQRankSum=-0.347;QD=0.96;ReadPosRankSum=-2.126;VQSLOD=-0.2025;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:6.13:0,6,40	0/1:8,0:8:6.63:20,0,7	0/0:52,0:18:7.49:0,7,59	0/1:65,1:23:3.57:4,0,63	1/1:21,0:21:26.65:145,27,0	0/0:19,0:19:24.53:0,25,70	0/0:19,0:19:15.10:0,15,51	0/0:33,0:32:6.26:0,6,35	0/0:16,0:16:9.36:0,9,28	0/0:22,0:22:9.45:0,9,42	0/0:22,0:22:9.78:0,10,47	0/0:15,0:15:5.72:0,6,16	0/1:5,2:7:14.84:42,0,15	0/0:17,0:17:9.48:0,9,33	0/0:25,0:25:26.94:0,27,85	0/0:22,0:22:23.74:0,24,67	0/0:25,0:25:20.13:0,20,60	0/0:16,0:16:7.87:0,8,23	0/0:21,0:21:14.07:0,14,57	0/0:10,0:9:5.27:0,5,14	0/1:11,0:11:0:0,0,0	0/1:11,1:13:21.14:21,0,126	0/0:18,0:21:33.95:0,34,205	0/1:9,1:10:28.63:29,0,74	0/0:23,0:23:22.36:0,22,63	0/0:23,0:23:27.44:0,27,86	0/0:20,0:20:17.24:0,17,60	0/0:10,0:10:6.05:0,6,17
chr10	64017012	.	AAAGG	A	5271.94	PASS	AB=0.937;AC=37;AF=0.661;AN=56;BaseQRankSum=3.691;DP=587;FS=11.916;HRun=0;HaplotypeScore=132.0044;InbreedingCoeff=0.3957;MQ=73.70;MQ0=11;MQRankSum=-3.366;QD=12.99;ReadPosRankSum=6.342;VQSLOD=3.5220;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:19,1:20:22.81:446,23,0	1/1:12,0:12:32.12:349,32,0	0/0:55,0:18:50.98:0,51,716	0/0:72,0:28:66.80:0,67,880	0/1:23,0:23:99:133,0,138	1/1:18,2:20:34.37:259,34,0	1/1:18,0:18:1.31:81,1,0	1/1:18,10:27:55.47:926,55,0	1/1:12,1:13:17.62:138,18,0	1/1:21,0:21:17.11:341,17,0	0/1:17,0:17:30.76:167,0,31	1/1:15,0:15:8.52:50,9,0	0/0:6,0:6:15.04:0,15,310	1/1:14,0:14:5.58:101,6,0	0/1:21,0:21:3.03:162,0,3	1/1:22,0:22:31.55:176,32,0	1/1:20,1:21:37.77:266,38,0	0/1:13,0:13:23.08:49,0,23	1/1:22,0:22:16.01:421,16,0	0/1:6,5:10:5.71:127,0,6	1/1:9,0:9:2.99:36,3,0	0/0:16,0:16:48.15:0,48,1003	0/0:21,0:21:57.19:0,57,1222	0/0:11,0:11:30.08:0,30,661	1/1:22,0:22:32.10:182,32,0	1/1:28,2:30:7.34:632,7,0	0/1:23,1:24:12.74:154,0,13	0/1:9,1:10:13.04:74,0,13
chr10	64017013	.	AAGG	A	8942.49	PASS	AB=1.000;AC=43;AF=0.768;AN=56;BaseQRankSum=1.152;DP=566;FS=11.503;HRun=0;HaplotypeScore=108.7768;InbreedingCoeff=0.8188;MQ=73.73;MQ0=11;MQRankSum=-5.332;QD=22.87;ReadPosRankSum=5.478;VQSLOD=3.9429;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:16,3:19:39.01:380,39,0	1/1:8,4:12:31.49:350,31,0	0/0:55,0:18:46.72:0,47,655	0/0:68,0:27:64.98:0,65,778	0/1:23,0:23:33.22:288,0,33	1/1:6,14:20:41.65:500,42,0	1/1:2,16:18:15.05:270,15,0	1/1:29,0:28:62.14:766,62,0	1/1:2,10:12:18.01:234,18,0	1/1:7,13:20:53.51:611,54,0	1/1:4,11:15:17.82:388,18,0	1/1:0,14:14:8.93:137,9,0	0/0:5,0:5:12.04:0,12,230	1/1:3,10:13:23.83:333,24,0	1/1:5,15:20:21.53:531,22,0	1/1:2,19:21:35.95:510,36,0	1/1:4,15:19:39.04:541,39,0	1/1:3,9:12:12:183,12,0	1/1:3,18:21:60.16:868,60,0	1/1:7,1:8:14.84:163,15,0	1/1:1,8:9:3:36,3,0	0/0:16,0:16:45.15:0,45,839	0/0:21,0:21:57.17:0,57,1023	0/0:10,0:10:30.10:0,30,575	1/1:0,22:22:33.11:502,33,0	1/1:6,23:29:50.43:874,50,0	1/1:8,16:24:9.72:354,10,0	1/1:2,8:10:8.99:122,9,0
chr10	64017014	.	AGG	A	7021.44	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=2.967;DP=553;FS=5.993;HRun=5;HaplotypeScore=107.7718;InbreedingCoeff=0.9243;MQ=75.20;MQ0=10;MQRankSum=-5.316;QD=18.28;ReadPosRankSum=4.811;VQSLOD=1.5695;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:14,3:17:33.01:343,33,0	1/1:10,2:12:29.83:304,30,0	0/0:53,0:18:32.45:0,32,555	0/0:62,0:28:63.70:0,64,709	1/1:13,5:23:50.60:523,51,0	1/1:16,4:20:41.85:386,42,0	1/1:17,1:18:20.97:175,21,0	1/1:26,3:28:71.81:761,72,0	1/1:11,1:12:17.99:166,18,0	1/1:15,4:19:50.96:540,51,0	1/1:12,3:15:35.87:346,36,0	1/1:14,0:14:8.99:75,9,0	0/0:5,0:5:12.04:0,12,173	1/1:10,3:13:23.99:215,24,0	1/1:17,3:20:35.97:309,36,0	1/1:19,2:21:35.90:312,36,0	1/1:16,3:19:38.98:355,39,0	1/1:10,1:11:11.99:105,12,0	1/1:18,2:20:60.02:590,60,0	1/1:8,1:8:15.02:165,15,0	1/1:9,0:9:3.01:36,3,0	0/0:17,0:17:48.16:0,48,751	0/0:21,0:21:51.17:0,51,813	0/0:10,0:10:30.09:0,30,456	1/1:22,0:22:32.96:277,33,0	1/1:26,2:28:65.85:725,66,0	1/1:18,6:24:26.87:239,27,0	1/1:9,0:9:8.99:75,9,0
chr10	64018074	.	A	AACAC	12532.99	PASS	AB=1.000;AC=43;AF=0.768;AN=56;BaseQRankSum=2.107;DP=656;FS=7.474;HRun=0;HaplotypeScore=123.5342;InbreedingCoeff=0.7303;MQ=73.03;MQ0=6;MQRankSum=-0.613;QD=24.01;ReadPosRankSum=1.090;VQSLOD=4.4519;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:17,21:42:42.14:944,42,0	1/1:2,3:5:6.02:142,6,0	1/1:23,0:15:2.84:14,3,0	0/0:25,0:15:0.89:0,1,2	0/0:19,0:19:1.66:0,2,3	1/1:16,0:16:17.86:333,18,0	1/1:39,0:39:46.56:866,47,0	0/1:37,0:37:30.97:31,0,50	1/1:22,0:22:33.11:613,33,0	1/1:20,0:20:39.11:672,39,0	1/1:11,0:11:9.03:168,9,0	1/1:30,0:30:53.97:1023,54,0	0/0:13,0:16:33.09:0,33,484	1/1:19,0:19:39:726,39,0	1/1:27,0:27:36.12:659,36,0	1/1:32,0:31:56.99:1045,57,0	1/1:29,0:28:38.72:733,39,0	1/1:21,0:21:36.12:676,36,0	1/1:17,0:17:18.06:336,18,0	1/1:21,0:21:23.86:425,24,0	1/1:33,0:32:47.74:895,48,0	0/0:15,0:15:12.03:0,12,190	0/0:11,0:15:39.11:0,39,558	0/0:36,0:44:65.99:0,66,960	1/1:27,0:25:47.95:897,48,0	1/1:25,0:25:40.83:767,41,0	1/1:20,0:20:24.08:455,24,0	1/1:5,0:5:6.02:112,6,0
chr10	64018086	.	C	CACAG	18712.50	PASS	AB=1.000;AC=42;AF=0.750;AN=56;BaseQRankSum=-8.899;DP=667;FS=9.116;HRun=0;HaplotypeScore=97.7998;InbreedingCoeff=0.6006;MQ=62.22;MQ0=7;MQRankSum=-0.047;QD=33.72;ReadPosRankSum=5.921;VQSLOD=4.2327;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:44,0:43:81.62:564,0,82	0/1:5,0:5:37.89:87,0,38	0/1:19,0:8:11.69:12,0,136	0/0:24,0:11:20.93:0,21,177	1/1:18,0:18:35.79:260,36,0	1/1:1,18:20:21.04:497,21,0	1/1:5,33:39:46.56:1237,47,0	0/1:40,0:40:19.98:589,0,20	1/1:2,18:21:33.11:878,33,0	1/1:2,21:25:60.54:1239,61,0	1/1:2,8:11:9.03:242,9,0	1/1:7,24:32:45.80:1422,46,0	0/0:19,0:19:53.92:0,54,735	1/1:1,19:21:39:1037,39,0	1/1:1,24:25:36.12:930,36,0	1/1:4,25:29:62.74:1530,63,0	1/1:4,21:28:51.02:1132,51,0	1/1:1,22:24:24.67:954,25,0	1/1:2,16:20:21.45:671,21,0	1/1:2,16:18:27.07:634,27,0	1/1:4,28:34:46.02:1321,46,0	0/0:13,0:12:32.98:0,33,393	0/0:16,0:16:45.12:0,45,719	0/0:40,0:40:98.88:0,99,1423	1/1:3,22:24:42.96:1301,43,0	1/1:2,23:26:71.64:1330,72,0	1/1:2,19:22:32.50:682,33,0	1/1:0,4:5:6.02:161,6,0
chr10	64018088	.	C	CAG	9012.79	PASS	AB=0.990;AC=36;AF=0.643;AN=56;BaseQRankSum=3.867;DP=659;FS=22.695;HRun=0;HaplotypeScore=115.9414;InbreedingCoeff=0.6052;MQ=61.23;MQ0=7;MQRankSum=0.439;QD=18.93;ReadPosRankSum=7.282;VQSLOD=3.2108;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:44:3.08:0,3,118	0/0:5,0:5:0.27:0,0,41	0/0:17,0:7:17.99:0,18,145	0/0:24,0:11:18.13:0,18,184	1/1:1,18:20:36.12:692,36,0	1/1:18,1:19:21.04:246,21,0	1/1:39,0:39:24.01:462,24,0	1/1:2,37:40:95.87:1215,96,0	0/1:21,0:21:8.09:312,0,8	0/1:25,0:25:27.22:459,0,27	1/1:11,0:11:9.02:98,9,0	1/1:29,2:31:42.14:583,42,0	0/0:20,0:20:57:0,57,646	1/1:20,0:20:38.81:416,39,0	1/1:23,0:23:15.07:331,15,0	1/1:27,2:28:40.67:668,41,0	1/1:28,1:28:12.37:468,12,0	1/1:21,0:21:39.07:414,39,0	0/1:22,0:22:99:254,0,122	1/1:16,2:18:27.07:336,27,0	1/1:34,0:33:33.91:540,34,0	0/0:14,0:13:32.98:0,33,349	0/0:16,0:16:45.04:0,45,571	0/0:41,0:41:98.80:0,99,1175	1/1:24,0:22:53.35:556,53,0	0/1:23,1:24:8.40:564,0,8	1/1:20,1:21:32.49:334,32,0	1/1:5,0:5:6.02:65,6,0
chr10	64022753	.	GTCACTC	G	6493.40	PASS	AB=0.810;AC=35;AF=0.625;AN=56;BaseQRankSum=-1.227;DP=579;FS=5.375;HRun=0;HaplotypeScore=144.2940;InbreedingCoeff=0.7994;MQ=72.35;MQ0=5;MQRankSum=-3.148;QD=18.71;ReadPosRankSum=1.737;VQSLOD=3.8705;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:71.91:0,72,963	1/1:7,2:9:23.93:284,24,0	0/0:25,0:19:23.34:0,23,312	0/0:37,0:17:20.91:0,21,240	0/0:17,1:18:26.74:0,27,201	1/1:12,1:16:33:372,33,0	0/1:0,23:23:0:0,0,0	0/0:25,0:25:57.13:0,57,976	0/0:28,0:28:33.04:0,33,817	0/1:24,2:26:80.09:442,0,80	0/1:11,0:12:99:121,0,184	1/1:8,4:13:20.99:374,21,0	0/0:14,0:14:35.14:0,35,823	1/1:6,4:11:11.98:103,12,0	1/1:12,8:20:38.66:420,39,0	1/1:0,24:26:11.97:213,12,0	1/1:13,7:20:44.39:622,44,0	1/1:0,17:17:9:149,9,0	1/1:2,0:18:39.79:349,40,0	1/1:9,3:13:29.99:267,30,0	1/1:27,3:31:44.83:390,45,0	1/1:16,0:16:32.95:276,33,0	0/0:12,0:11:23.88:0,24,381	0/0:32,0:32:90.11:0,90,1803	1/1:14,5:19:35.93:322,36,0	1/1:19,5:25:13.61:781,14,0	1/1:11,1:14:38.98:422,39,0	1/1:14,3:18:50.98:587,51,0
chr10	64022754	.	TCA	T	5424.61	PASS	AB=0.980;AC=37;AF=0.661;AN=56;BaseQRankSum=0.236;DP=578;FS=5.412;HRun=0;HaplotypeScore=115.4411;InbreedingCoeff=0.7965;MQ=72.35;MQ0=5;MQRankSum=-3.606;QD=14.43;ReadPosRankSum=1.946;VQSLOD=4.6473;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:71.40:0,71,592	1/1:9,0:9:23.90:191,24,0	0/0:25,0:19:23.34:0,23,312	0/0:37,0:17:20.58:0,21,239	0/0:18,0:18:26.74:0,27,201	1/1:15,1:16:28.61:268,29,0	0/1:23,0:23:0:0,0,0	0/0:25,0:25:49.24:0,49,576	0/0:29,0:29:26.07:0,26,471	1/1:26,0:26:75.08:756,75,0	0/1:12,0:12:12.31:149,0,12	1/1:12,1:13:20.95:239,21,0	0/0:14,0:14:35.08:0,35,402	1/1:11,0:11:11.98:103,12,0	1/1:21,0:21:33.41:320,33,0	1/1:26,0:26:11.93:92,12,0	1/1:20,0:20:47.11:356,47,0	1/1:17,0:17:8.47:56,8,0	1/1:17,0:17:39.78:321,40,0	1/1:14,0:14:22.05:237,22,0	1/1:31,0:31:44.70:365,45,0	1/1:13,1:14:32.93:276,33,0	0/0:12,0:11:23.86:0,24,243	0/1:30,2:32:39.87:40,0,805	1/1:16,0:16:34.47:277,34,0	1/1:26,0:26:64.70:629,65,0	1/1:14,0:14:38.95:331,39,0	1/1:18,0:18:50.93:419,51,0
chr10	64022756	.	A	ACT	439.10	PASS	AB=0.946;AC=7;AF=0.152;AN=46;BaseQRankSum=-4.822;DP=598;FS=3.327;HRun=0;HaplotypeScore=141.5064;InbreedingCoeff=0.0636;MQ=69.93;MQ0=5;MQRankSum=1.145;QD=2.57;ReadPosRankSum=-2.614;VQSLOD=2.3024;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:42,0:43:11.31:149,0,11	0/0:9,0:9:5.68:0,6,28	./.	./.	0/1:12,0:18:0:0,0,0	0/0:17,0:17:8.82:0,9,63	./.	0/1:30,0:30:14.65:114,0,15	0/1:12,16:29:25.34:201,0,25	0/1:30,0:30:1.78:47,0,2	0/1:11,0:11:32.34:35,0,32	0/0:14,0:14:11.47:0,11,64	0/0:15,0:15:11.97:0,12,128	0/1:10,0:10:0:0,0,0	0/0:21,0:21:8.63:0,9,51	0/0:26,0:26:8.52:0,9,42	0/0:20,0:20:17.15:0,17,92	0/0:17,0:17:5.80:0,6,33	0/0:18,0:18:2.84:0,3,14	0/0:15,0:15:2.99:0,3,24	./.	./.	0/0:11,1:12:3:0,3,32	0/0:37,0:37:22.41:0,22,343	0/0:18,0:17:0.47:0,0,1	0/0:26,0:26:10.93:0,11,87	0/0:14,0:14:7.72:0,8,34	0/0:19,0:19:13.89:0,14,73
chr10	64022819	.	C	CGTGTGT	1316.99	PASS	AB=0.977;AC=13;AF=0.232;AN=56;BaseQRankSum=4.850;DP=555;FS=5.032;HRun=0;HaplotypeScore=178.0685;InbreedingCoeff=-0.1952;MQ=51.94;MQ0=8;MQRankSum=-2.542;QD=5.14;ReadPosRankSum=-1.864;VQSLOD=2.3411;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:27:33.08:0,33,614	0/0:11,0:11:8.77:0,9,76	0/0:6,0:2:3.48:0,3,38	0/0:10,0:4:1.30:0,1,8	0/0:23,0:23:12.03:0,12,148	0/0:14,0:14:5.76:0,6,266	0/1:35,0:35:95.21:95,0,290	0/0:33,0:33:54.28:0,54,766	0/1:25,0:25:15.30:15,0,730	0/1:28,0:27:99:394,0,523	0/0:10,0:10:3.81:0,4,32	0/0:19,0:19:12.66:0,13,133	0/0:13,0:13:36.06:0,36,636	1/1:15,0:15:2.74:65,3,0	0/1:19,0:19:20.41:20,0,40	0/1:17,2:18:23.63:232,0,24	0/0:23,0:23:4.47:0,4,216	0/1:13,1:14:14.31:14,0,84	0/1:23,0:21:99:107,0,399	0/1:17,0:17:1.65:2,0,129	0/0:27,0:25:25.34:0,25,309	0/0:18,0:18:20.86:0,21,233	0/0:21,0:21:51.07:0,51,959	0/0:36,0:36:84.13:0,84,1558	0/1:19,2:20:9.68:10,0,122	0/1:22,0:22:99:452,0,289	0/0:7,0:7:9.40:0,9,64	0/1:18,0:18:53.08:53,0,201
chr10	64022823	.	C	CGTGTGT	3848.36	PASS	AB=0.800;AC=30;AF=0.600;AN=50;BaseQRankSum=-1.464;DP=594;FS=0.000;HRun=0;HaplotypeScore=168.3444;InbreedingCoeff=0.1646;MQ=52.41;MQ0=10;MQRankSum=-2.801;QD=9.08;ReadPosRankSum=-4.873;VQSLOD=1.1082;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:25:21.07:0,21,293	1/1:3,8:11:2.68:22,3,0	./.	./.	./.	0/1:17,0:18:18.23:18,0,50	0/1:30,3:33:39.37:328,0,39	0/1:30,0:30:16.66:17,0,129	0/1:19,0:19:33.86:34,0,527	1/1:17,13:30:30.09:817,30,0	1/1:4,6:11:2.94:35,3,0	0/1:10,12:23:0:0,0,0	0/0:13,0:13:14.24:0,14,389	1/1:7,11:18:2.74:98,3,0	0/1:9,7:18:37.75:101,0,38	1/1:19,0:18:18.05:447,18,0	1/1:13,10:29:3.78:173,4,0	1/1:12,0:13:11.39:119,11,0	1/1:23,0:22:29.85:391,30,0	1/1:9,9:23:3.47:29,3,0	0/1:15,10:34:17.76:84,0,18	0/0:6,13:25:2.24:0,2,5	0/0:16,0:19:35.97:0,36,638	0/0:33,0:34:67.34:0,67,1138	1/1:10,2:21:2.50:38,2,0	0/1:9,15:27:24:901,0,24	0/0:2,5:11:0.47:0,0,1	1/1:8,0:18:11.74:195,12,0
chr10	64023962	.	C	CTT	4575.88	PASS	AB=0.590;AC=38;AF=0.679;AN=56;BaseQRankSum=3.418;DP=638;FS=5.761;HRun=11;HaplotypeScore=129.0287;InbreedingCoeff=0.3386;MQ=75.85;MQ0=0;MQRankSum=-0.963;QD=8.68;ReadPosRankSum=-0.789;VQSLOD=2.5849;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:9,23:36:28.05:705,28,0	0/1:5,0:13:12.49:27,0,12	0/0:24,0:22:11.22:0,11,151	0/0:19,0:14:8.42:0,8,109	1/1:3,0:24:47.30:215,47,0	0/1:5,0:18:3.64:52,0,4	0/1:2,0:12:11.08:33,0,11	1/1:17,22:40:48.86:803,49,0	1/1:6,8:14:35.65:444,36,0	1/1:6,2:23:43.85:221,44,0	1/1:6,0:18:4.96:62,5,0	1/1:15,0:25:38.73:201,39,0	0/0:23,0:23:50.91:0,51,472	1/1:7,0:15:28.46:129,28,0	1/1:7,0:33:24.28:154,24,0	0/1:14,0:34:38.07:172,0,38	0/1:7,1:26:11.75:125,0,12	0/1:6,1:21:9.28:116,0,9	1/1:7,3:26:50.02:295,50,0	1/1:6,0:27:24.15:172,24,0	0/1:4,0:13:6.13:46,0,6	0/1:5,0:16:9.46:61,0,9	0/0:22,0:23:38.60:0,39,359	0/0:21,0:21:53.70:0,54,488	1/1:8,0:21:25.20:225,25,0	1/1:10,0:29:42.91:160,43,0	1/1:1,0:24:27.45:95,27,0	1/1:4,0:19:1.37:63,1,0
chr10	64023980	.	A	AT	235.07	PASS	AB=0.909;AC=3;AF=0.054;AN=56;BaseQRankSum=1.790;DP=542;FS=1.938;HRun=9;HaplotypeScore=109.7767;InbreedingCoeff=0.5759;MQ=71.64;MQ0=0;MQRankSum=-4.142;QD=6.72;ReadPosRankSum=-2.223;VQSLOD=1.4505;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:50.76:0,51,437	0/0:10,0:10:23.98:0,24,206	0/0:20,0:20:5.76:0,6,270	0/0:14,0:9:14.15:0,14,100	0/0:18,0:18:47.98:0,48,414	0/0:14,0:14:26.98:0,27,234	0/0:14,0:14:26.50:0,26,233	0/0:33,0:33:39.69:0,40,516	1/1:8,7:15:32.98:322,33,0	0/0:22,0:22:47.97:0,48,416	0/0:14,0:14:29.98:0,30,260	0/0:26,0:26:65.06:0,65,558	0/1:18,2:20:18.17:18,0,309	0/0:15,0:15:38.90:0,39,328	0/0:26,0:26:45.13:0,45,409	0/0:31,0:31:74.32:0,74,633	0/0:20,0:20:44.98:0,45,390	0/0:23,0:23:41.94:0,42,364	0/0:23,0:23:53.93:0,54,461	0/0:20,0:20:44.84:0,45,377	0/0:17,0:17:41.97:0,42,362	0/0:11,0:11:26.99:0,27,233	0/0:18,0:18:11.20:0,11,276	0/0:17,0:17:41.98:0,42,365	0/0:20,0:20:41.90:0,42,356	0/0:21,0:21:44.98:0,45,390	0/0:15,0:15:23.73:0,24,208	0/0:15,0:15:20.85:0,21,171
chr10	64026243	.	C	CCGG	97.83	PASS	AC=4;AF=0.091;AN=44;BaseQRankSum=-1.380;DP=285;FS=0.000;HRun=0;HaplotypeScore=51.3019;InbreedingCoeff=0.4512;MQ=65.33;MQ0=0;MQRankSum=-0.512;QD=6.52;ReadPosRankSum=0.233;VQSLOD=1.9676;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,6:13:9.03:179,9,0	0/0:7,0:7:8.99:0,9,104	./.	0/0:6,0:5:0:0,0,0	./.	./.	0/0:40,0:40:42.13:0,42,562	./.	0/0:6,0:6:12.04:0,12,167	0/0:12,0:12:9.03:0,9,125	1/1:2,0:2:0.47:1,0,0	0/0:8,0:8:9.03:0,9,122	0/0:2,0:2:3.01:0,3,42	0/0:12,0:12:12.04:0,12,167	0/0:6,0:6:15.05:0,15,208	0/0:4,0:4:6.02:0,6,83	0/0:33,0:34:81.24:0,81,1103	0/0:17,0:17:33.11:0,33,457	0/0:9,0:9:11.54:0,12,141	./.	0/0:28,0:28:29.99:0,30,352	0/0:5,0:5:3.01:0,3,42	./.	0/0:35,0:35:69.23:0,69,955	0/0:12,0:12:17.71:0,18,212	0/0:8,0:8:8.86:0,9,124	0/0:4,0:4:6:0,6,65	0/0:2,0:2:3.01:0,3,42
chr10	64028031	.	G	GT	337.55	PASS	AB=0.920;AC=5;AF=0.089;AN=56;BaseQRankSum=-3.697;DP=470;FS=0.721;HRun=12;HaplotypeScore=53.5373;InbreedingCoeff=0.2363;MQ=66.89;MQ0=0;MQRankSum=-2.006;QD=5.04;ReadPosRankSum=-1.267;VQSLOD=0.9362;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,18:26:26.62:407,27,0	0/0:4,0:4:8.92:0,9,66	0/0:9,0:7:6.33:0,6,33	0/1:7,0:6:4.58:5,0,22	0/0:22,2:24:56.57:0,57,413	0/0:12,0:12:25.88:0,26,182	0/0:8,0:8:20.84:0,21,149	0/0:32,2:34:6.26:0,6,394	0/1:5,1:6:14.26:14,0,73	0/0:25,0:25:52.64:0,53,378	0/0:17,0:17:41.72:0,42,305	0/0:11,1:12:3.63:0,4,189	0/0:15,1:16:9.56:0,10,232	0/0:13,0:13:32.73:0,33,238	0/0:24,0:24:65.56:0,66,478	0/0:22,1:24:33.34:0,33,406	0/0:23,0:23:53.61:0,54,391	0/0:10,0:10:26.84:0,27,197	0/1:24,3:28:27.78:28,0,253	0/0:18,0:18:44.32:0,44,315	0/0:14,1:15:6.58:0,7,212	0/0:11,0:12:16.88:0,17,113	0/0:11,0:12:12.42:0,12,155	0/0:14,0:14:32.80:0,33,241	0/0:14,0:16:33.37:0,33,230	0/0:19,0:20:46.22:0,46,330	0/0:21,0:21:52.68:0,53,377	0/0:18,0:19:2.33:0,2,173
chr10	64028768	.	T	TTTTG	1168.20	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-3.561;DP=734;FS=3.209;HRun=0;HaplotypeScore=114.3344;InbreedingCoeff=0.9982;MQ=64.59;MQ0=2;MQRankSum=-3.076;QD=27.81;ReadPosRankSum=0.717;VQSLOD=3.1981;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,31:41:37.25:1263,37,0	0/0:14,0:14:36.12:0,36,579	0/0:18,0:16:30.93:0,31,432	0/0:16,0:15:26.80:0,27,399	0/0:40,0:40:99:0,108,1728	0/0:30,0:30:78.22:0,78,1227	0/0:18,0:18:45.13:0,45,688	0/0:39,0:39:84.26:0,84,1304	0/0:19,0:19:48.15:0,48,767	0/0:36,0:36:90.31:0,90,1476	0/0:26,0:26:66.21:0,66,1055	0/0:24,0:24:51.17:0,51,810	0/0:20,0:20:45.04:0,45,644	0/0:28,0:28:72.23:0,72,1164	0/0:29,0:29:81.23:0,81,1235	0/0:24,0:24:57.08:0,57,911	0/0:23,0:22:51.08:0,51,718	0/0:24,0:24:63.18:0,63,983	0/0:23,0:23:45.12:0,45,662	0/0:25,0:25:60.19:0,60,957	0/0:19,0:19:51.16:0,51,828	0/0:29,0:29:69.19:0,69,1046	0/0:26,0:26:60.19:0,60,962	0/0:31,0:31:90.25:0,90,1399	0/0:23,0:23:60.18:0,60,893	0/0:28,0:28:66.18:0,66,976	0/0:36,0:35:62.83:0,63,947	0/0:24,0:23:63.17:0,63,953
chr10	64030607	.	T	TA	638.24	PASS	AB=0.900;AC=3;AF=0.056;AN=54;BaseQRankSum=-7.477;DP=514;FS=0.740;HRun=11;HaplotypeScore=49.1195;InbreedingCoeff=0.5585;MQ=66.97;MQ0=0;MQRankSum=1.825;QD=16.37;ReadPosRankSum=1.327;VQSLOD=4.2176;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,28:30:72.14:731,72,0	0/0:10,0:10:29.89:0,30,232	0/0:10,0:8:0.24:0,0,25	./.	0/0:25,0:26:70.73:0,71,536	0/0:14,0:14:32.87:0,33,255	0/0:16,1:17:11.38:0,11,271	0/0:24,0:24:53.73:0,54,415	0/0:19,0:19:50.80:0,51,395	0/0:23,0:23:56.76:0,57,439	0/0:22,0:22:56.78:0,57,441	0/0:24,0:24:56.73:0,57,437	0/0:18,0:18:50.79:0,51,393	0/0:12,0:12:35.85:0,36,276	0/0:19,0:19:50.79:0,51,395	0/0:21,0:24:63.83:0,64,474	0/0:28,0:28:65.66:0,66,506	0/0:11,0:11:26.84:0,27,204	0/0:20,0:21:52.79:0,53,396	0/0:20,0:20:41.79:0,42,323	0/0:24,0:24:50.53:0,51,376	0/0:16,0:16:38.83:0,39,300	0/0:16,0:16:26.47:0,26,196	0/0:12,0:12:23.88:0,24,183	0/0:16,0:16:38.83:0,39,302	0/0:20,0:20:56.78:0,57,441	0/0:22,0:23:58.79:0,59,447	0/1:7,1:9:7.49:7,0,122
chr10	64038372	.	A	ACG	1578.29	PASS	AB=0.850;AC=20;AF=0.357;AN=56;BaseQRankSum=7.850;DP=645;FS=5.691;HRun=0;HaplotypeScore=174.0595;InbreedingCoeff=-0.5530;MQ=57.39;MQ0=6;MQRankSum=-5.393;QD=3.50;ReadPosRankSum=-0.529;VQSLOD=2.5338;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:24,1:25:12.95:13,0,193	0/1:13,1:14:24.93:25,0,118	0/0:30,0:15:34.56:0,35,431	0/0:29,0:19:42.13:0,42,639	0/1:10,3:13:55.58:56,0,92	0/1:10,5:15:79.22:87,0,79	0/1:38,8:46:11.66:12,0,275	0/0:21,0:21:0.94:0,1,249	0/0:26,0:26:63.28:0,63,409	0/1:16,5:21:99:131,0,126	0/0:12,1:13:19.62:0,20,137	0/1:18,9:27:99:214,0,130	0/0:21,0:21:63.19:0,63,921	0/1:11,6:17:59.28:122,0,59	0/1:17,8:25:97.46:209,0,97	0/1:13,8:21:75.92:161,0,76	0/1:26,5:29:99:138,0,155	0/1:16,3:19:75.28:75,0,193	0/1:13,1:14:92.82:93,0,112	0/1:16,2:18:1.99:2,0,123	0/1:55,4:57:47.40:47,0,392	0/1:9,0:9:33.64:46,0,34	0/0:16,0:16:45.05:0,45,607	0/0:37,0:37:99:0,108,1557	0/1:18,7:25:58.70:59,0,142	0/1:20,7:27:99:132,0,192	0/1:13,3:16:93.53:94,0,143	0/1:9,0:9:19.37:19,0,79
chr10	64038374	.	A	ACGCACG	6882.43	PASS	AB=0.864;AC=22;AF=0.393;AN=56;BaseQRankSum=4.994;DP=660;FS=47.388;HRun=0;HaplotypeScore=197.2305;InbreedingCoeff=-0.6270;MQ=54.15;MQ0=6;MQRankSum=-7.742;QD=13.76;ReadPosRankSum=-0.587;VQSLOD=2.7010;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:23:99:138,0,163	0/1:12,1:13:83.87:126,0,84	0/0:28,0:13:28.91:0,29,420	0/0:30,0:17:17.72:0,18,651	0/1:9,0:12:69.01:131,0,69	0/1:10,5:15:73.89:291,0,74	0/1:41,8:48:99:295,0,197	0/1:20,0:20:22.17:22,0,160	0/0:26,0:26:33.67:0,34,462	0/1:17,5:22:46.14:631,0,46	0/1:13,1:14:63.14:118,0,63	0/1:23,9:32:99:626,0,112	0/0:21,0:21:63.20:0,63,1324	0/1:13,6:19:26.13:434,0,26	0/1:17,8:25:99:521,0,120	0/1:13,8:21:75.56:417,0,76	0/1:28,5:31:99:546,0,104	0/1:16,3:19:81.93:363,0,82	0/1:16,1:17:49.52:251,0,50	0/1:15,2:17:54.48:54,0,102	0/1:56,4:58:99:234,0,266	0/1:8,0:8:59.23:76,0,59	0/0:16,0:16:42.12:0,42,748	0/0:38,0:38:99:0,108,2091	0/1:19,7:26:44.42:416,0,44	0/1:22,7:29:95.24:713,0,95	0/1:12,3:15:99:211,0,138	0/1:11,0:11:5.93:267,0,6
chr10	64038384	.	A	ACGCACGCA	11319.07	PASS	AB=1.000;AC=45;AF=0.804;AN=56;BaseQRankSum=-0.915;DP=669;FS=1.942;HRun=0;HaplotypeScore=203.5301;InbreedingCoeff=0.7215;MQ=53.47;MQ0=8;MQRankSum=-4.731;QD=21.77;ReadPosRankSum=-2.541;VQSLOD=4.1430;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:22:9.03:213,9,0	1/1:10,0:10:9.01:192,9,0	0/0:33,0:12:8.30:0,8,94	0/0:31,0:17:6.35:0,6,81	1/1:11,0:11:12.01:130,12,0	1/1:14,0:14:12.04:490,12,0	1/1:47,0:46:23.31:532,23,0	1/1:17,0:17:12.70:71,13,0	0/1:22,0:22:35.99:36,0,268	1/1:19,0:19:42.12:1086,42,0	1/1:13,0:13:11.41:180,11,0	1/1:36,0:36:30.04:1016,30,0	0/0:25,0:25:48.15:0,48,1077	1/1:21,5:27:23.90:733,24,0	1/1:20,0:20:21.07:824,21,0	1/1:20,0:20:18.06:658,18,0	1/1:34,0:32:39.09:1048,39,0	1/1:23,0:23:29.99:640,30,0	1/1:20,0:19:16.28:296,16,0	1/1:16,0:16:3.01:123,3,0	1/1:63,0:60:38.71:396,39,0	1/1:7,0:7:3.01:91,3,0	0/0:19,0:19:21.05:0,21,449	0/0:38,0:38:47.70:0,48,1400	1/1:24,0:24:29.95:587,30,0	1/1:29,0:29:48.09:1253,48,0	1/1:14,0:14:9.03:368,9,0	1/1:12,0:12:26.99:357,27,0
chr10	64038392	.	A	ACGCACGCA	11126.47	PASS	AB=0.986;AC=46;AF=0.821;AN=56;BaseQRankSum=-0.805;DP=662;FS=2.739;HRun=0;HaplotypeScore=200.0933;InbreedingCoeff=0.6640;MQ=52.25;MQ0=8;MQRankSum=-4.539;QD=20.23;ReadPosRankSum=-1.795;VQSLOD=4.2011;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:24:9.03:213,9,0	1/1:7,0:7:9.01:192,9,0	0/0:28,0:11:8.30:0,8,95	0/1:33,0:15:4.32:4,0,71	1/1:8,0:8:12.01:130,12,0	1/1:17,0:17:12.04:490,12,0	1/1:42,0:41:23.31:532,23,0	1/1:17,0:17:12.70:72,13,0	0/1:21,0:21:35.99:36,0,268	1/1:20,0:20:42.12:1086,42,0	1/1:15,0:15:11.41:180,11,0	1/1:31,6:38:30.04:1016,30,0	0/0:26,0:26:48.15:0,48,1077	1/1:32,0:32:23.90:733,24,0	1/1:18,0:18:21.07:824,21,0	1/1:20,0:20:18.06:658,18,0	1/1:36,0:34:36.08:925,36,0	1/1:24,0:24:29.99:640,30,0	1/1:22,0:21:16.28:296,16,0	1/1:14,0:14:6.02:171,6,0	1/1:62,0:59:38.71:395,39,0	1/1:6,0:6:3.01:91,3,0	0/0:16,0:16:21.05:0,21,449	0/0:40,0:40:47.70:0,48,1400	1/1:24,0:24:29.95:587,30,0	1/1:29,0:29:45.08:1131,45,0	1/1:9,0:9:9.03:368,9,0	1/1:11,0:11:26.99:357,27,0
chr10	64038405	.	CAT	C	1178.45	PASS	AB=0.891;AC=9;AF=0.161;AN=56;BaseQRankSum=4.553;DP=678;FS=22.381;HRun=0;HaplotypeScore=162.4043;InbreedingCoeff=0.0329;MQ=56.34;MQ0=7;MQRankSum=0.673;QD=5.15;ReadPosRankSum=-4.361;VQSLOD=0.6816;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,1:33:84.20:0,84,1480	0/0:6,1:7:18.03:0,18,284	0/0:25,0:10:21.09:0,21,285	0/0:32,0:13:24.10:0,24,376	0/0:13,0:13:36.12:0,36,632	0/0:17,1:18:37.64:0,38,575	0/1:39,4:42:52.41:52,0,956	0/0:13,3:16:1.39:0,1,583	1/1:0,20:20:51.17:824,51,0	0/1:20,3:23:99:156,0,732	0/0:15,1:16:2.12:0,2,631	0/0:32,3:35:72.23:0,72,1226	0/0:24,0:24:72.25:0,72,1434	0/1:37,4:41:11.14:11,0,1355	0/0:19,1:20:36.11:0,36,541	0/0:18,3:21:39.09:0,39,555	0/1:34,6:38:53.23:53,0,1316	0/1:19,6:25:99:129,0,848	0/0:22,1:22:60.18:0,60,1077	0/0:13,1:14:18.06:0,18,335	0/0:58,3:58:14.05:0,14,1899	0/0:6,0:6:12.04:0,12,212	0/0:12,0:12:36.12:0,36,727	0/0:40,0:40:95.77:0,96,1971	0/0:20,1:21:45.13:0,45,783	0/1:23,2:25:16.80:17,0,1084	0/0:9,3:12:27.09:0,27,461	0/1:11,1:12:79.71:80,0,494
chr10	64038972	.	GACTGT	G	543.95	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.596;DP=683;FS=21.716;HRun=0;HaplotypeScore=173.9982;InbreedingCoeff=0.9095;MQ=74.14;MQ0=0;MQRankSum=-4.881;QD=49.45;ReadPosRankSum=-0.726;VQSLOD=1.8474;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:75.26:0,75,2328	0/0:9,0:9:21.07:0,21,657	0/0:18,0:18:6.57:0,7,1115	0/0:21,0:21:47.78:0,48,1131	0/0:28,0:28:78.27:0,78,2380	0/0:25,0:25:63.20:0,63,1896	0/0:26,0:26:69.21:0,69,1960	0/0:34,0:34:93.30:0,93,2692	1/1:1,9:11:30.10:638,30,0	0/0:28,0:27:72.25:0,72,2153	0/0:19,0:19:42.14:0,42,1314	0/0:33,0:33:90.31:0,90,2794	0/0:19,0:19:42.13:0,42,1222	0/0:22,0:22:51.18:0,51,1565	0/0:40,0:40:93.31:0,93,2748	0/0:26,0:26:63.22:0,63,1879	0/0:22,0:22:57.18:0,57,1714	0/0:14,0:14:36.12:0,36,1117	0/0:28,0:28:69.21:0,69,2000	0/0:33,0:33:87.30:0,87,2676	0/0:28,0:28:71.77:0,72,2045	0/0:31,0:31:75.26:0,75,2269	0/0:31,0:31:75.24:0,75,2277	0/0:19,0:19:48.12:0,48,1414	0/0:21,0:21:54.16:0,54,1617	0/0:29,0:29:87.26:0,87,2567	0/0:27,0:27:72.25:0,72,2250	0/0:12,0:12:33.11:0,33,887
chr10	64039258	.	A	AAAAAAAG	13058.79	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=5.969;DP=442;FS=31.617;HRun=0;HaplotypeScore=107.8434;InbreedingCoeff=0.9019;MQ=42.75;MQ0=21;MQRankSum=-5.491;QD=37.31;ReadPosRankSum=-2.446;VQSLOD=2.4047;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:16:23.94:582,24,0	1/1:6,2:7:12.04:323,12,0	0/0:24,0:8:15.02:0,15,191	0/0:18,0:6:3.17:0,3,233	1/1:18,6:21:33.02:698,33,0	1/1:11,2:13:18.06:422,18,0	1/1:7,0:6:12.04:152,12,0	1/1:30,0:25:47.32:814,47,0	1/1:7,1:7:11.98:189,12,0	1/1:9,3:10:24.08:510,24,0	1/1:13,7:18:33.07:702,33,0	1/1:4,2:6:15.04:320,15,0	0/0:17,0:17:45.11:0,45,898	1/1:12,2:13:30.10:593,30,0	1/1:11,2:13:24.07:454,24,0	1/1:12,4:15:34.35:806,34,0	1/1:10,1:10:23.98:411,24,0	1/1:13,1:11:24.49:357,24,0	1/1:17,2:18:45.13:815,45,0	1/1:24,6:30:64.51:1481,65,0	1/1:3,1:3:6.02:169,6,0	1/1:15,1:16:27.07:494,27,0	0/0:18,0:17:36.11:0,36,665	0/0:14,0:13:33.10:0,33,660	1/1:16,6:21:43.01:995,43,0	1/1:8,3:11:24.03:569,24,0	1/1:16,3:18:33.91:745,34,0	1/1:10,2:10:24.08:460,24,0
chr10	64039272	.	G	GA	684.13	PASS	AB=0.931;AC=15;AF=0.268;AN=56;BaseQRankSum=7.184;DP=490;FS=15.076;HRun=6;HaplotypeScore=120.2098;InbreedingCoeff=-0.2742;MQ=52.44;MQ0=16;MQRankSum=-8.393;QD=2.82;ReadPosRankSum=4.318;VQSLOD=-0.3791;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:20,0:19:62.73:63,0,123	0/0:8,1:8:1.06:0,1,105	0/0:33,0:12:28:0,28,263	0/0:31,0:14:24.57:0,25,309	0/0:23,2:23:16.78:0,17,326	0/1:14,1:15:23.28:23,0,196	0/0:6,1:6:15.04:0,15,161	0/1:24,6:26:99:148,0,386	0/1:12,0:11:10.24:10,0,110	0/1:13,1:12:99:101,0,102	0/1:22,2:22:5.48:5,0,294	0/0:7,0:7:1.03:0,1,113	0/0:20,0:20:51.13:0,51,546	0/0:14,0:14:1.49:0,1,227	0/1:13,0:13:25.02:25,0,254	0/1:16,1:17:55.80:56,0,216	0/0:17,0:16:8.72:0,9,311	0/0:14,0:11:15.54:0,16,218	0/1:22,1:22:34.49:34,0,425	0/1:24,3:27:99:112,0,363	1/1:3,1:3:5.38:47,5,0	0/1:10,2:12:98.13:98,0,131	0/0:18,0:18:45.14:0,45,484	0/0:15,0:15:36.09:0,36,387	0/1:19,2:20:73.27:73,0,242	0/1:9,1:10:38.41:38,0,159	0/0:25,1:24:8.17:0,8,348	0/0:9,0:9:7.35:0,7,178
chr10	64039288	.	G	GA	8128.66	PASS	AB=0.573;AC=42;AF=0.750;AN=56;BaseQRankSum=2.894;DP=489;FS=12.694;HRun=9;HaplotypeScore=100.1412;InbreedingCoeff=0.8403;MQ=61.12;MQ0=3;MQRankSum=-5.896;QD=23.43;ReadPosRankSum=3.969;VQSLOD=4.2358;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,14:18:36.10:398,36,0	0/1:1,9:10:1.99:208,0,2	0/0:28,0:16:29.03:0,29,268	0/0:27,0:13:32.83:0,33,273	1/1:7,17:23:39.10:427,39,0	1/1:2,17:19:45.12:497,45,0	1/1:0,6:6:18.05:199,18,0	0/0:35,0:32:68.94:0,69,590	1/1:1,11:12:27.01:283,27,0	1/1:1,10:11:30.08:332,30,0	1/1:3,18:19:45.12:497,45,0	1/1:0,1:11:31.45:175,31,0	0/0:18,0:18:47.87:0,48,397	1/1:4,9:13:30.08:330,30,0	1/1:3,10:13:4.03:273,4,0	1/1:4,15:19:45.12:497,45,0	1/1:3,13:16:36.10:398,36,0	1/1:2,11:12:31.02:357,31,0	1/1:7,18:25:49.09:574,49,0	1/1:7,24:31:46.02:692,46,0	1/1:2,2:4:8.98:86,9,0	1/1:2,9:11:24.06:265,24,0	0/0:19,0:19:47.81:0,48,416	0/0:15,0:15:41.88:0,42,345	1/1:3,19:22:45.08:483,45,0	0/1:5,8:13:1.96:208,0,2	1/1:3,19:22:36.95:617,37,0	1/1:0,12:12:30.08:332,30,0
chr10	64039549	.	CCTT	C	1432.30	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-0.309;DP=616;FS=1.402;HRun=0;HaplotypeScore=117.1323;InbreedingCoeff=0.9904;MQ=78.17;MQ0=0;MQRankSum=-2.856;QD=31.83;ReadPosRankSum=0.794;VQSLOD=4.0736;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,42:45:99:1527,99,0	0/0:7,0:7:21.04:0,21,397	0/0:19,0:18:35.94:0,36,719	0/0:25,0:25:71.94:0,72,1264	0/0:11,0:11:33.11:0,33,660	0/0:24,0:24:72.23:0,72,1556	0/0:22,0:21:63.20:0,63,1306	0/0:32,0:32:87.28:0,87,1859	0/0:39,0:39:99:0,114,2460	0/0:19,0:19:51.65:0,52,1120	0/0:12,0:11:21.07:0,21,409	0/0:27,0:27:72.22:0,72,1470	0/0:19,0:19:54.17:0,54,1144	0/0:26,0:26:73.48:0,73,1575	0/0:23,0:23:69.24:0,69,1542	0/0:26,0:26:78.25:0,78,1701	0/0:29,0:29:87.25:0,87,1835	0/0:20,0:20:60.20:0,60,1260	0/0:16,0:16:42.10:0,42,855	0/0:19,0:19:54.19:0,54,1184	0/0:35,0:34:99:0,99,2158	0/0:14,0:14:39.12:0,39,832	0/0:11,0:11:27.09:0,27,547	0/0:19,0:20:57.18:0,57,1199	0/0:13,0:13:39.06:0,39,795	0/0:22,0:22:66.23:0,66,1439	0/0:26,0:26:72.25:0,72,1617	0/0:15,0:15:39.13:0,39,869
chr10	64039837	.	CG	C	7051.66	PASS	AB=0.576;AC=37;AF=0.712;AN=52;BaseQRankSum=1.780;DP=405;FS=12.737;HRun=2;HaplotypeScore=46.3000;InbreedingCoeff=0.7151;MQ=45.77;MQ0=25;MQRankSum=2.100;QD=23.12;ReadPosRankSum=0.219;VQSLOD=3.1434;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:19:45.15:0,45,670	1/1:0,6:5:15.05:194,15,0	./.	./.	0/0:14,0:13:30.10:0,30,443	1/1:1,22:17:48.16:622,48,0	0/1:7,16:12:8.93:140,0,9	1/1:4,14:12:30.10:385,30,0	0/0:12,0:10:24.04:0,24,333	1/1:1,12:10:27.09:344,27,0	1/1:0,15:12:27.09:350,27,0	0/1:1,12:11:17.37:284,0,17	0/0:12,0:12:27.09:0,27,404	1/1:1,13:11:33.11:427,33,0	1/1:1,20:18:42.14:543,42,0	1/1:1,16:12:36.12:466,36,0	1/1:3,14:14:36.12:466,36,0	1/1:2,16:14:36.12:467,36,0	1/1:3,9:9:27.09:349,27,0	1/1:2,17:12:30.09:368,30,0	1/1:2,8:8:11.55:155,12,0	1/1:1,12:13:30.10:389,30,0	0/0:21,0:20:54.18:0,54,802	0/0:15,0:14:36.12:0,36,519	1/1:2,8:6:12.04:156,12,0	1/1:1,16:12:36.12:461,36,0	1/1:0,13:11:21.07:272,21,0	0/1:5,8:10:23.59:213,0,24
chr10	64039852	.	GAA	G	292.52	PASS	AB=0.630;AC=3;AF=0.058;AN=52;BaseQRankSum=-2.724;DP=479;FS=4.062;HRun=8;HaplotypeScore=86.5198;InbreedingCoeff=0.5890;MQ=44.19;MQ0=24;MQRankSum=-3.837;QD=9.44;ReadPosRankSum=2.542;VQSLOD=0.2903;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:25:57.17:0,57,930	0/0:4,0:3:9:0,9,123	./.	./.	1/1:4,10:13:18.03:219,18,0	0/0:26,0:20:45.14:0,45,732	0/0:24,0:12:18.05:0,18,277	0/0:24,0:20:45.08:0,45,679	0/1:7,10:15:66.21:176,0,66	0/0:14,0:11:27.05:0,27,425	0/0:14,0:11:21.02:0,21,287	0/0:16,0:14:30.06:0,30,448	0/0:11,0:11:27.07:0,27,406	0/0:15,0:11:21.07:0,21,349	0/0:24,0:21:38.95:0,39,483	0/0:20,0:15:42.07:0,42,645	0/0:26,0:21:51.12:0,51,821	0/0:16,0:12:33.06:0,33,497	0/0:17,0:14:30.06:0,30,476	0/0:21,0:14:27.03:0,27,373	0/0:9,0:7:12.01:0,12,172	0/0:15,0:15:30.06:0,30,475	0/0:25,0:24:56.96:0,57,735	0/0:24,0:22:48.01:0,48,699	0/0:20,0:15:35.99:0,36,509	0/0:19,0:12:27.02:0,27,420	0/0:16,0:14:23.12:0,23,326	0/0:15,0:12:27.05:0,27,389
chr10	64040219	.	AC	A	237.54	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.915;DP=531;FS=0.000;HRun=6;HaplotypeScore=66.1349;InbreedingCoeff=0.9537;MQ=77.42;MQ0=3;MQRankSum=-0.119;QD=15.84;ReadPosRankSum=-0.693;VQSLOD=3.0654;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:45.04:0,45,545	0/0:7,0:7:15.04:0,15,182	0/0:33,0:22:42.39:0,42,382	0/0:17,0:11:13.84:0,14,107	0/0:23,0:23:50.45:0,50,571	0/0:17,0:17:43.61:0,44,508	0/0:12,0:12:24.95:0,25,282	0/0:17,0:17:34.61:0,35,363	1/1:3,12:15:26.93:332,27,0	0/0:17,0:17:31.83:0,32,462	0/0:17,1:18:35.96:0,36,510	0/0:18,0:18:44.94:0,45,524	0/0:14,0:14:36.08:0,36,430	0/0:19,0:18:51.06:0,51,597	0/0:20,0:20:50.91:0,51,602	0/0:22,0:22:61.37:0,61,729	0/0:22,0:22:60.18:0,60,773	0/0:13,0:13:18.09:0,18,187	0/0:22,0:22:54.99:0,55,597	0/0:27,0:24:51.32:0,51,625	0/0:17,0:17:39.08:0,39,465	0/0:14,0:14:33.99:0,34,430	0/0:21,0:21:45.33:0,45,555	0/0:19,0:19:51.14:0,51,630	0/0:19,0:19:42.07:0,42,516	0/0:26,0:26:65.73:0,66,732	0/0:28,0:28:72.17:0,72,872	0/0:15,0:15:36.44:0,36,473
chr10	64041049	.	CCGAAAAAAAAAAAAAAAAAAAGAA	C	1708.99	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.025;DP=416;FS=1.305;HRun=0;HaplotypeScore=197.7872;InbreedingCoeff=0.8287;MQ=44.17;MQ0=33;MQRankSum=-2.938;QD=113.93;ReadPosRankSum=4.596;VQSLOD=3.1729;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:11:30.06:0,30,1340	0/0:9,0:9:27.09:0,27,1253	0/0:22,0:5:12.93:0,13,376	0/0:29,0:5:12.04:0,12,430	0/0:26,0:25:66.14:0,66,2910	0/0:7,0:7:12.03:0,12,423	0/0:13,0:11:24.08:0,24,992	0/0:20,0:18:48.16:0,48,1804	1/1:1,14:14:27.09:1803,27,0	0/0:16,0:15:45.12:0,45,1805	0/0:18,0:18:45.61:0,46,2421	0/0:7,0:7:18.06:0,18,546	0/0:15,0:14:36.58:0,37,1830	0/0:6,0:5:15.01:0,15,932	0/0:15,0:14:33.11:0,33,1937	0/0:12,0:11:21.07:0,21,1252	0/0:12,0:10:21.07:0,21,1257	0/0:13,0:12:24.07:0,24,1252	0/0:18,0:13:33.09:0,33,1567	0/0:21,0:18:51.18:0,51,2915	0/0:10,0:9:26.64:0,27,1476	0/0:16,0:15:42.11:0,42,1260	0/0:19,0:19:48.16:0,48,2652	0/0:7,0:4:9.03:0,9,471	0/0:13,0:12:24.07:0,24,1527	0/0:15,0:14:33.95:0,34,1572	0/0:12,0:10:27.09:0,27,955	0/0:12,0:7:15.05:0,15,438
chr10	64041077	.	GA	G	5253.98	PASS	AB=0.610;AC=42;AF=0.750;AN=56;BaseQRankSum=-2.304;DP=584;FS=3.432;HRun=10;HaplotypeScore=70.9123;InbreedingCoeff=0.7020;MQ=57.02;MQ0=35;MQRankSum=3.419;QD=13.86;ReadPosRankSum=-0.653;VQSLOD=4.9314;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,13:18:26.97:233,27,0	1/1:3,5:8:11.98:103,12,0	0/0:67,0:15:10.61:0,11,104	0/0:70,1:14:2.58:0,3,104	1/1:12,9:21:23.05:273,23,0	1/1:5,5:10:14.99:130,15,0	1/1:4,6:9:5.99:52,6,0	1/1:8,29:36:73.28:610,73,0	0/0:19,1:19:13.62:0,14,226	0/1:8,9:17:1.71:187,0,2	1/1:8,15:23:41.58:344,42,0	1/1:2,6:8:11.99:104,12,0	0/0:21,1:22:19.50:0,19,409	1/1:3,10:13:0.12:134,0,0	1/1:10,10:19:31.82:253,32,0	1/1:7,11:17:11.96:104,12,0	1/1:8,15:20:39.99:311,40,0	1/1:4,9:13:29.91:248,30,0	1/1:8,15:21:44.82:378,45,0	1/1:6,14:17:42.86:366,43,0	1/1:3,7:9:17.98:156,18,0	1/1:0,10:10:23.99:208,24,0	0/0:20,0:20:38.49:0,38,401	0/0:5,0:5:9.01:0,9,92	1/1:7,14:21:37.41:317,37,0	1/1:9,16:24:41.89:358,42,0	1/1:7,8:14:34.50:294,34,0	0/1:3,10:11:18.20:89,0,18
chr10	64041809	.	G	GTGTGTCTATGTGTCTA	11221.62	PASS	AB=0.635;AC=45;AF=0.804;AN=56;BaseQRankSum=-1.166;DP=639;FS=0.000;HRun=0;HaplotypeScore=231.4202;InbreedingCoeff=0.6738;MQ=47.86;MQ0=8;MQRankSum=-2.178;QD=20.67;ReadPosRankSum=-0.729;VQSLOD=3.6182;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:28:12.04:308,12,0	1/1:11,0:11:6:123,6,0	0/0:14,0:8:20.74:0,21,406	0/0:16,0:9:22.85:0,23,488	1/1:27,0:26:6.30:75,6,0	1/1:11,0:18:3.01:177,3,0	1/1:38,0:37:36.62:1010,37,0	1/1:27,0:26:66.22:1572,66,0	1/1:13,0:14:9.03:267,9,0	1/1:30,0:30:45.12:1219,45,0	1/1:11,0:25:12.04:184,12,0	1/1:10,0:21:3.01:37,3,0	0/0:25,0:25:53.99:0,54,1678	1/1:5,0:15:3.01:182,3,0	1/1:24,0:24:15.05:417,15,0	0/1:17,16:40:12.33:224,0,12	1/1:17,0:17:21.07:546,21,0	1/1:15,0:15:32.32:887,32,0	1/1:12,5:24:42.08:1155,42,0	1/1:31,0:30:26.77:483,27,0	1/1:33,0:33:17.51:305,18,0	1/1:25,0:25:8.31:143,8,0	0/0:10,0:10:21.07:0,21,690	0/0:31,0:31:63.22:0,63,2014	1/1:10,8:26:1.75:227,2,0	1/1:29,0:29:39.11:811,39,0	1/1:14,0:14:18.06:482,18,0	1/1:3,3:8:8.96:388,9,0
chr10	64042972	.	AT	A	620.10	PASS	AB=0.900;AC=3;AF=0.054;AN=56;BaseQRankSum=7.615;DP=424;FS=6.510;HRun=8;HaplotypeScore=41.3030;InbreedingCoeff=0.5861;MQ=70.08;MQ0=0;MQRankSum=1.278;QD=17.72;ReadPosRankSum=1.088;VQSLOD=3.0239;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:90.28:0,90,1086	0/0:7,0:7:21.06:0,21,254	0/1:8,1:8:31.96:32,0,80	0/0:10,0:8:16.49:0,16,165	1/1:2,24:26:72.11:694,72,0	0/0:13,0:13:39.11:0,39,461	0/0:11,0:11:30.09:0,30,359	0/0:22,0:22:60.16:0,60,704	0/0:6,0:6:15.03:0,15,170	0/0:12,0:12:33.10:0,33,399	0/0:12,0:12:33.10:0,33,399	0/0:13,0:13:36.11:0,36,435	0/0:9,0:9:27.08:0,27,326	0/0:14,0:14:42.13:0,42,507	0/0:13,0:13:39.12:0,39,471	0/0:21,0:21:57.16:0,57,678	0/0:14,0:14:42.13:0,42,507	0/0:24,0:24:66.20:0,66,797	0/0:14,0:14:39.12:0,39,471	0/0:18,0:18:42.13:0,42,507	0/0:10,0:10:27.08:0,27,326	0/0:4,0:4:6.02:0,6,72	0/0:8,0:8:21.06:0,21,253	0/0:9,0:9:27.04:0,27,309	0/0:34,0:34:93.29:0,93,1123	0/0:25,0:25:69.21:0,69,834	0/0:23,0:23:54.17:0,54,652	0/0:11,0:11:30.09:0,30,362
chr10	64043424	.	A	ATGTGTG	4571.72	PASS	AB=0.833;AC=40;AF=0.769;AN=52;BaseQRankSum=-3.012;DP=554;FS=13.044;HRun=0;HaplotypeScore=147.1867;InbreedingCoeff=0.4632;MQ=67.22;MQ0=6;MQRankSum=-0.270;QD=10.94;ReadPosRankSum=-0.154;VQSLOD=3.0291;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:20:6:71,6,0	1/1:9,0:9:18.03:265,18,0	./.	./.	0/0:11,0:16:3.48:0,3,42	1/1:17,0:17:18.06:316,18,0	1/1:27,0:26:3.01:51,3,0	0/1:30,0:28:8.94:59,0,9	0/0:15,0:16:6.02:0,6,83	1/1:18,0:18:30.99:734,31,0	1/1:12,0:13:2.99:50,3,0	1/1:15,0:15:14.60:146,15,0	0/0:9,0:9:4.32:0,4,67	1/1:9,7:16:3.01:96,3,0	1/1:22,0:22:3.01:49,3,0	1/1:19,0:19:12.04:229,12,0	1/1:15,4:20:6.02:134,6,0	0/1:9,7:18:27.10:276,0,27	1/1:24,0:23:7.56:74,8,0	1/1:14,0:13:6.02:139,6,0	1/1:37,0:37:26.70:514,27,0	1/1:15,0:15:15.02:235,15,0	0/0:17,0:17:9:0,9,123	0/0:26,0:27:10.58:0,11,531	1/1:20,1:22:10.93:220,11,0	1/1:32,0:32:38.10:635,38,0	1/1:19,0:19:12.43:129,12,0	1/1:10,0:10:9.03:151,9,0
chr10	64043577	.	CA	C	774.26	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-0.612;DP=620;FS=3.318;HRun=8;HaplotypeScore=105.9247;InbreedingCoeff=0.9729;MQ=74.07;MQ0=0;MQRankSum=0.645;QD=22.77;ReadPosRankSum=-3.957;VQSLOD=1.7857;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:81.24:0,81,969	0/0:10,0:10:24.07:0,24,290	0/0:18,0:18:37.38:0,37,479	0/0:23,1:20:13.12:0,13,386	0/0:26,0:26:72.22:0,72,869	0/0:19,0:19:54.17:0,54,651	0/0:14,0:14:30.07:0,30,349	1/1:4,30:34:90.14:869,90,0	0/0:20,0:20:51.16:0,51,616	0/0:19,0:19:57.17:0,57,679	0/0:21,0:21:57.17:0,57,688	0/0:17,0:17:42.13:0,42,506	0/0:23,0:23:60.18:0,60,719	0/0:15,0:15:42.13:0,42,507	0/0:22,0:21:63.18:0,63,750	0/0:22,0:22:66.16:0,66,770	0/0:22,0:21:57.17:0,57,689	0/0:25,0:25:63.16:0,63,735	0/0:20,0:20:48.11:0,48,565	0/0:27,0:27:69.17:0,69,812	0/0:22,0:22:63.19:0,63,761	0/0:21,0:21:60.18:0,60,722	0/0:19,0:19:48.15:0,48,580	0/0:18,0:18:45.14:0,45,544	0/0:32,0:32:90.28:0,90,1086	0/0:40,0:40:99:0,120,1440	0/0:32,0:32:84.22:0,84,986	0/0:10,0:10:27.05:0,27,302
chr10	64044549	.	CTTTT	C	5413.19	PASS	AB=0.932;AC=37;AF=0.661;AN=56;BaseQRankSum=11.199;DP=523;FS=8.515;HRun=4;HaplotypeScore=169.8699;InbreedingCoeff=0.2617;MQ=73.77;MQ0=1;MQRankSum=-11.233;QD=13.70;ReadPosRankSum=7.508;VQSLOD=0.3080;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:20,0:20:13.82:188,0,14	0/1:19,0:19:4.19:287,0,4	0/0:40,0:22:26.49:0,26,1091	0/0:36,0:21:50.36:0,50,1058	1/1:24,1:25:38.56:257,39,0	1/1:26,0:26:35.51:468,36,0	1/1:3,0:3:8.98:73,9,0	0/1:25,0:25:99:113,0,137	1/1:17,1:18:22.74:361,23,0	0/1:14,0:14:25.99:166,0,26	1/1:25,1:26:38.20:436,38,0	1/1:17,4:21:46.88:369,47,0	0/0:18,0:18:54.18:0,54,1308	1/1:18,3:21:1.12:339,1,0	1/1:21,2:23:30.84:393,31,0	0/1:10,3:13:21.28:172,0,21	0/1:11,1:11:0.44:152,0,0	0/1:5,0:5:12.89:44,0,13	0/1:14,1:15:29.98:151,0,30	0/1:19,1:32:12.75:327,0,13	1/1:11,0:11:8.83:58,9,0	1/1:14,1:15:37.43:300,37,0	0/0:21,0:21:60.21:0,60,1535	0/0:13,0:13:39.13:0,39,1032	1/1:14,0:14:9.71:258,10,0	1/1:15,0:15:15.18:239,15,0	1/1:17,0:17:11.76:238,12,0	1/1:5,0:5:1.94:23,2,0
chr10	64044553	.	TC	T	9156.77	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=5.812;DP=522;FS=9.704;HRun=1;HaplotypeScore=139.7492;InbreedingCoeff=0.9288;MQ=72.44;MQ0=1;MQRankSum=-9.447;QD=23.91;ReadPosRankSum=2.079;VQSLOD=3.9215;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,11:18:46.20:402,46,0	1/1:5,12:17:51.01:472,51,0	0/0:41,2:22:9.85:0,10,293	0/0:37,0:21:45.42:0,45,376	1/1:20,10:30:59.03:480,59,0	1/1:7,17:24:69.08:656,69,0	1/1:1,2:3:9.02:89,9,0	1/1:0,19:19:56.90:488,57,0	1/1:7,12:19:56.61:517,57,0	1/1:7,6:13:36.01:337,36,0	1/1:9,18:27:51.87:581,52,0	1/1:13,8:21:62.72:572,63,0	0/0:20,0:20:24.82:0,25,392	1/1:8,12:20:56.95:498,57,0	1/1:9,13:22:65.98:597,66,0	1/1:7,6:13:35.79:312,36,0	1/1:7,4:10:32.98:295,33,0	1/1:2,3:5:12.02:116,12,0	1/1:10,5:15:21.44:366,21,0	1/1:14,16:30:62.77:595,63,0	1/1:7,4:11:17.22:134,17,0	1/1:4,11:15:42.05:398,42,0	0/0:25,0:25:35.39:0,35,449	0/0:14,0:14:9.63:0,10,292	1/1:3,10:13:39.06:375,39,0	1/1:5,10:15:42.88:394,43,0	1/1:8,9:17:47.94:430,48,0	1/1:1,4:5:6:53,6,0
chr10	64044562	.	TTTTTTTC	T	14386.33	PASS	AB=0.952;AC=41;AF=0.732;AN=56;BaseQRankSum=10.861;DP=572;FS=7.722;HRun=0;HaplotypeScore=182.4423;InbreedingCoeff=0.5043;MQ=73.49;MQ0=1;MQRankSum=-11.602;QD=34.42;ReadPosRankSum=8.246;VQSLOD=3.2576;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:18,1:19:5.77:557,6,0	1/1:14,1:15:18.28:863,18,0	0/0:48,0:25:56.79:0,57,1193	0/0:39,0:22:52.17:0,52,1054	0/1:33,1:34:99:221,0,221	1/1:17,6:23:54.10:1160,54,0	1/1:6,0:6:9.49:207,9,0	1/1:23,0:23:13.27:437,13,0	1/1:19,0:19:7.09:448,7,0	0/1:21,1:22:2.12:522,0,2	1/1:25,1:26:36.92:1199,37,0	1/1:18,0:18:38.51:908,39,0	0/0:21,0:21:63.20:0,63,2024	1/1:17,0:17:47.51:1077,48,0	1/1:26,1:27:44.59:1087,45,0	0/1:14,1:15:14.47:557,0,14	1/1:13,0:12:18.71:433,19,0	0/1:7,0:7:15.94:129,0,16	0/1:15,2:17:77.56:391,0,78	1/1:30,2:32:12.41:965,12,0	1/1:8,0:8:8:151,8,0	1/1:16,0:16:33.17:735,33,0	0/0:30,0:30:87.30:0,87,2694	0/0:15,0:15:45.15:0,45,1580	1/1:13,2:15:29.16:701,29,0	1/1:21,0:21:51.49:894,51,0	1/1:16,1:17:28.94:675,29,0	1/1:8,0:8:4.31:69,4,0
chr10	64044563	.	TTTTTTC	T	11693.53	PASS	AB=0.921;AC=44;AF=0.786;AN=56;BaseQRankSum=10.973;DP=553;FS=5.662;HRun=0;HaplotypeScore=176.2484;InbreedingCoeff=0.6786;MQ=74.34;MQ0=1;MQRankSum=-10.172;QD=29.38;ReadPosRankSum=6.567;VQSLOD=3.5458;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,9:19:30.82:460,31,0	1/1:3,11:14:37.45:630,37,0	0/0:51,0:27:66.89:0,67,1165	0/0:38,0:21:52.65:0,53,955	0/1:32,0:32:24.02:480,0,24	1/1:12,10:22:53.95:925,54,0	1/1:4,2:6:9.45:138,9,0	1/1:10,6:16:15.92:320,16,0	1/1:17,2:19:42.65:884,43,0	1/1:17,5:22:20.88:483,21,0	1/1:8,17:25:39.34:835,39,0	1/1:10,7:17:39.20:686,39,0	0/0:21,0:21:63.20:0,63,1722	1/1:5,12:17:47.16:748,47,0	1/1:14,12:26:43.30:778,43,0	1/1:9,5:14:5.38:399,5,0	1/1:8,4:12:14.78:289,15,0	1/1:4,3:7:1.71:94,2,0	0/1:13,3:16:24.13:326,0,24	1/1:19,12:31:50.29:773,50,0	1/1:3,4:7:8.25:110,8,0	1/1:6,9:15:33.48:576,33,0	0/0:30,0:30:87.27:0,87,2279	0/0:15,0:15:45.15:0,45,1368	1/1:7,8:15:28.99:512,29,0	1/1:11,10:21:52.06:689,52,0	1/1:10,7:17:27.71:510,28,0	1/1:4,4:8:3.10:49,3,0
chr10	64044564	.	TTTTTC	T	10630.74	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=10.568;DP=555;FS=2.905;HRun=0;HaplotypeScore=170.0173;InbreedingCoeff=0.9144;MQ=75.01;MQ0=1;MQRankSum=-10.038;QD=26.64;ReadPosRankSum=5.690;VQSLOD=4.3935;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:18:33.80:446,34,0	1/1:14,0:14:34.96:573,35,0	0/0:51,0:28:67.21:0,67,1026	0/0:38,0:21:54.31:0,54,866	1/1:22,9:31:22.03:429,22,0	1/1:22,0:22:54.18:821,54,0	1/1:6,0:6:9.36:121,9,0	1/1:16,0:16:16.35:295,16,0	1/1:9,10:19:42.72:623,43,0	1/1:23,0:23:30.46:505,30,0	1/1:25,0:25:39.61:753,40,0	1/1:16,1:17:42.85:630,43,0	0/0:21,0:21:63.15:0,63,1459	1/1:17,0:17:47.25:679,47,0	1/1:25,0:25:40.96:685,41,0	1/1:14,0:14:25.30:404,25,0	1/1:13,0:13:15.32:279,15,0	1/1:7,0:7:8.66:105,9,0	1/1:16,0:16:6.11:307,6,0	1/1:29,1:31:47.86:671,48,0	1/1:7,0:7:8.28:101,8,0	1/1:14,1:15:33.54:511,34,0	0/0:30,0:30:81.26:0,81,1896	0/0:15,0:15:45.15:0,45,1167	1/1:15,0:15:29.42:464,29,0	1/1:21,0:21:51.90:642,52,0	1/1:19,0:19:30.79:531,31,0	1/1:8,0:8:8.33:55,8,0
chr10	64044567	.	TTC	T	9353.97	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=4.630;DP=560;FS=13.612;HRun=0;HaplotypeScore=144.7115;InbreedingCoeff=0.9766;MQ=74.03;MQ0=1;MQRankSum=-10.562;QD=23.04;ReadPosRankSum=4.167;VQSLOD=4.9896;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:19:53.83:447,54,0	1/1:14,0:14:41.85:386,42,0	0/0:51,0:27:52.60:0,53,491	0/0:35,0:19:41.63:0,42,394	1/1:28,0:28:51.27:433,51,0	1/1:22,1:23:68.64:604,69,0	1/1:5,0:5:14.90:130,15,0	1/1:18,0:18:53.70:442,54,0	1/1:18,0:18:39.81:349,40,0	1/1:22,0:22:62.35:540,62,0	1/1:26,1:27:76.15:620,76,0	1/1:13,4:17:50.72:445,51,0	0/0:23,0:23:51.50:0,52,743	1/1:15,3:18:53.93:475,54,0	1/1:24,2:26:77.73:671,78,0	1/1:14,3:17:46.85:413,47,0	1/1:13,1:14:38.22:337,38,0	1/1:7,0:7:9.69:74,10,0	1/1:18,0:18:35.70:373,36,0	1/1:30,0:30:60.17:499,60,0	1/1:7,0:7:11.88:88,12,0	1/1:14,1:15:44.88:386,45,0	0/0:29,0:29:80.86:0,81,1038	0/0:16,0:16:30:0,30,599	1/1:15,0:15:44.96:394,45,0	1/1:22,0:22:62.99:567,63,0	1/1:18,0:18:53.83:488,54,0	1/1:8,0:8:23.92:192,24,0
chr10	64044568	.	TC	T	8014.46	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=4.364;DP=549;FS=0.000;HRun=4;HaplotypeScore=137.9680;InbreedingCoeff=0.9799;MQ=73.02;MQ0=0;MQRankSum=-9.508;QD=20.04;ReadPosRankSum=2.647;VQSLOD=3.4616;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:19:53.58:390,54,0	1/1:13,0:13:38.64:268,39,0	0/0:47,0:26:29.73:0,30,319	0/0:33,0:18:23.61:0,24,226	1/1:23,4:27:71.44:534,71,0	1/1:22,0:22:65.47:468,65,0	1/1:5,0:5:14.80:97,15,0	1/1:18,0:18:53.56:398,54,0	1/1:12,5:17:44.12:304,44,0	1/1:23,0:23:62.17:497,62,0	1/1:27,0:27:72.21:485,72,0	1/1:15,0:15:44.56:308,45,0	0/0:23,0:23:48.86:0,49,469	1/1:19,0:19:56.03:386,56,0	1/1:26,0:26:76.56:562,77,0	1/1:18,0:18:49.62:372,50,0	1/1:14,0:14:38.03:281,38,0	1/1:3,4:7:11.75:79,12,0	1/1:17,1:18:50.40:387,50,0	1/1:26,0:26:58.01:383,58,0	1/1:6,0:6:11.78:74,12,0	1/1:16,0:16:47.53:332,48,0	0/0:30,0:30:66.06:0,66,708	0/0:16,0:16:38.10:0,38,401	1/1:15,0:15:44.65:323,45,0	1/1:23,0:23:65.69:516,66,0	1/1:17,0:18:53.48:387,53,0	1/1:8,0:8:23.88:184,24,0
chr10	64045664	.	GA	G	4722.92	PASS	AB=0.708;AC=41;AF=0.732;AN=56;BaseQRankSum=2.520;DP=472;FS=4.999;HRun=13;HaplotypeScore=55.3808;InbreedingCoeff=0.2753;MQ=66.57;MQ0=6;MQRankSum=0.218;QD=11.19;ReadPosRankSum=1.670;VQSLOD=4.4901;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,22:26:24.47:343,24,0	0/1:2,7:9:8.32:110,0,8	0/1:14,1:6:6.80:7,0,39	0/1:14,0:9:2.16:2,0,21	0/1:5,8:14:5.05:132,0,5	1/1:2,12:15:28.87:203,29,0	1/1:3,9:12:26.83:197,27,0	0/1:15,19:35:30.24:259,0,30	1/1:3,14:17:35.77:260,36,0	1/1:7,13:17:35.24:249,35,0	1/1:5,15:20:14.62:261,15,0	0/1:4,2:6:15.43:15,0,24	0/0:16,1:17:23.10:0,23,371	1/1:2,8:10:20.85:153,21,0	1/1:1,9:10:17.89:131,18,0	1/1:1,19:20:38.75:284,39,0	1/1:9,22:31:33.44:408,33,0	0/1:8,5:13:11.31:91,0,11	1/1:7,12:19:14.58:260,15,0	1/1:11,7:18:23.14:161,23,0	0/1:2,8:10:11.53:91,0,12	1/1:5,15:21:17.59:283,18,0	0/0:19,0:20:50.92:0,51,481	0/0:13,0:13:35.88:0,36,330	0/1:2,4:6:14.03:67,0,14	1/1:5,12:17:31.83:225,32,0	1/1:8,21:29:53.64:394,54,0	1/1:4,8:13:19.91:136,20,0
chr10	64046445	.	TG	T	1706.60	PASS	AB=0.959;AC=45;AF=0.804;AN=56;BaseQRankSum=4.405;DP=268;FS=2.975;HRun=1;HaplotypeScore=51.0519;InbreedingCoeff=0.2335;MQ=46.39;MQ0=19;MQRankSum=-4.529;QD=6.85;ReadPosRankSum=-0.399;VQSLOD=0.6014;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:11,0:10:2.02:40,0,2	1/1:2,0:1:1.55:4,2,0	0/1:22,2:4:1.85:3,0,2	0/1:13,2:5:0.98:19,0,1	0/1:18,2:20:34.33:99,0,34	1/1:10,0:8:18.56:104,19,0	1/1:3,0:3:4.52:24,5,0	0/1:25,0:24:43.61:62,0,44	1/1:4,0:4:2.03:6,2,0	1/1:15,0:14:37.29:211,37,0	1/1:6,1:7:20.15:125,20,0	1/1:5,0:5:8.36:46,8,0	0/1:6,0:6:3.63:4,0,104	1/1:6,0:6:14.62:109,15,0	1/1:11,0:10:27.82:190,28,0	1/1:6,0:6:11.68:70,12,0	1/1:7,0:7:16.87:107,17,0	1/1:5,0:5:14.09:80,14,0	1/1:10,0:8:21.21:118,21,0	1/1:6,0:5:5.86:36,6,0	0/0:3,0:1:2.50:0,2,9	1/1:1,0:1:2.90:16,3,0	0/1:13,0:13:10.79:11,0,149	0/0:16,0:15:15.72:0,16,133	1/1:6,0:6:14.49:75,14,0	1/1:12,0:10:24.50:137,24,0	1/1:9,0:7:16.86:86,17,0	1/1:10,0:9:17.73:65,18,0
chr10	64046455	.	T	TGTTG	440.50	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-2.526;DP=242;FS=0.000;HRun=0;HaplotypeScore=70.0160;InbreedingCoeff=0.4691;MQ=40.27;MQ0=24;MQRankSum=1.400;QD=20.02;ReadPosRankSum=1.406;VQSLOD=3.2995;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:8:17.74:0,18,123	0/0:2,0:1:3.01:0,3,39	0/0:23,0:4:5.83:0,6,37	0/0:12,0:3:3.80:0,4,28	1/1:3,12:17:22.64:531,23,0	0/0:10,0:8:23.99:0,24,303	0/0:4,0:4:8.91:0,9,118	0/0:21,0:20:42.95:0,43,480	0/0:4,0:4:5.38:0,5,59	0/0:16,0:15:40.50:0,41,360	0/0:7,0:7:13.60:0,14,87	0/0:4,0:4:11.93:0,12,145	0/0:6,0:6:18.06:0,18,320	0/0:5,0:5:11.62:0,12,123	0/0:10,0:9:19.88:0,20,219	0/0:4,0:4:8.39:0,8,89	0/0:5,0:5:10.71:0,11,93	0/0:2,0:2:5.85:0,6,34	0/0:10,0:8:20.43:0,20,200	1/1:5,0:4:2.37:8,2,0	0/0:4,0:1:2.84:0,3,14	0/0:1,0:1:2.92:0,3,17	0/0:11,0:11:30.05:0,30,493	0/0:17,0:16:46.36:0,46,786	0/0:5,0:5:12.70:0,13,113	0/0:9,0:7:20.18:0,20,177	0/0:9,0:7:20.37:0,20,187	0/0:10,0:9:27.02:0,27,344
chr10	64046457	.	TG	T	1402.58	PASS	AC=42;AF=0.778;AN=54;BaseQRankSum=4.211;DP=226;FS=9.330;HRun=1;HaplotypeScore=46.3617;InbreedingCoeff=0.6307;MQ=40.67;MQ0=24;MQRankSum=-5.336;QD=9.74;ReadPosRankSum=-0.270;VQSLOD=0.2395;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,1:8:14.75:85,15,0	1/1:2,0:1:0.89:2,1,0	0/0:20,0:2:2.97:0,3,22	0/0:8,1:2:2.84:0,3,14	0/0:18,0:18:5.31:0,5,155	1/1:9,1:8:13.44:88,13,0	1/1:4,0:4:6.82:42,7,0	1/1:3,18:20:48.19:510,48,0	1/1:3,0:3:2.70:8,3,0	1/1:14,0:13:31.73:183,32,0	1/1:6,0:6:13.54:69,14,0	1/1:4,0:4:6.34:41,6,0	0/0:6,0:6:15:0,15,167	1/1:5,0:5:11.44:79,11,0	1/1:7,0:6:15.04:109,15,0	1/1:4,0:4:4.28:20,4,0	1/1:5,0:5:9.80:48,10,0	1/1:3,0:2:4.66:19,5,0	1/1:10,0:8:13.38:59,13,0	1/1:4,0:3:2.90:16,3,0	./.	1/1:1,0:1:2.88:15,3,0	0/0:11,0:11:26.49:0,26,279	0/0:15,0:14:9.10:0,9,324	1/1:5,0:5:9.49:37,9,0	1/1:8,0:6:8.34:28,8,0	1/1:9,0:7:11.49:59,11,0	1/1:10,0:9:12.06:45,12,0
chr10	64047655	.	CAT	C	1883.28	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.582;DP=416;FS=10.341;HRun=0;HaplotypeScore=50.5966;InbreedingCoeff=0.9876;MQ=61.59;MQ0=0;MQRankSum=2.674;QD=36.93;ReadPosRankSum=-3.864;VQSLOD=3.4822;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:60.21:0,60,1079	0/0:6,0:6:18.06:0,18,324	0/0:16,0:15:42.14:0,42,723	0/0:14,0:10:28.23:0,28,421	1/1:0,19:19:51.17:713,51,0	0/0:17,0:17:45.14:0,45,780	0/0:13,0:13:33.11:0,33,594	1/1:0,32:32:96.28:1292,96,0	0/0:10,0:10:27.08:0,27,456	0/0:12,0:12:33.11:0,33,594	0/0:17,0:17:45.15:0,45,810	0/0:10,0:10:24.08:0,24,431	0/0:7,0:7:18.06:0,18,323	0/0:12,0:12:30.10:0,30,539	0/0:15,0:15:42.13:0,42,726	0/0:9,0:9:27.09:0,27,485	0/0:17,0:17:51.17:0,51,904	0/0:25,0:25:66.23:0,66,1172	0/0:15,0:15:42.14:0,42,757	0/0:20,0:20:51.17:0,51,913	0/0:11,0:11:33.11:0,33,581	0/0:12,0:12:33.11:0,33,593	0/0:10,0:10:27.09:0,27,486	0/0:19,0:19:51.17:0,51,918	0/0:12,0:12:36.11:0,36,620	0/0:19,0:19:54.19:0,54,972	0/0:16,0:16:48.15:0,48,833	0/0:11,0:11:30.10:0,30,539
chr10	64047827	.	TAC	T	437.33	PASS	AB=0.998;AC=22;AF=0.458;AN=48;BaseQRankSum=-1.759;DP=436;FS=8.824;HRun=0;HaplotypeScore=91.2151;InbreedingCoeff=-0.2786;MQ=51.00;MQ0=17;MQRankSum=1.099;QD=1.45;ReadPosRankSum=4.468;VQSLOD=0.7898;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:25:5.95:0,6,27	0/1:5,0:5:13.54:18,0,14	./.	./.	1/1:12,1:14:3.01:33,3,0	0/1:17,0:17:33.66:34,0,75	0/1:19,0:19:21.68:22,0,34	./.	0/0:15,0:15:4.80:0,5,27	0/0:15,0:14:1.91:0,2,6	0/1:10,0:10:0.14:0,0,0	1/1:10,0:10:8.65:51,9,0	0/1:14,0:13:20.14:20,0,108	0/0:14,0:14:2.97:0,3,24	0/1:16,0:16:11.79:12,0,90	0/1:17,0:16:36.43:36,0,71	0/1:32,0:28:55.46:55,0,140	0/1:23,0:22:39.88:40,0,82	1/1:28,0:22:5.59:27,6,0	0/1:9,0:9:13.66:14,0,25	1/1:20,0:17:6.35:27,6,0	./.	0/0:7,2:8:2.79:0,3,44	0/1:32,1:29:49.11:49,0,279	0/1:11,0:11:22.17:29,0,22	0/1:19,0:18:6.05:76,0,6	0/1:5,0:5:13.06:35,0,13	0/0:7,0:6:10.34:0,10,76
chr10	64047873	.	C	CAAAAAA	9433.46	PASS	AB=1.000;AC=36;AF=0.643;AN=56;BaseQRankSum=5.355;DP=472;FS=5.355;HRun=4;HaplotypeScore=125.7711;InbreedingCoeff=0.8037;MQ=65.71;MQ0=18;MQRankSum=-4.808;QD=32.98;ReadPosRankSum=-4.311;VQSLOD=0.0896;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:24:34.46:0,34,829	0/1:3,0:3:3.99:18,0,4	0/0:31,0:17:45.05:0,45,781	0/0:28,0:17:46.03:0,46,883	0/0:9,0:8:12.01:0,12,190	1/1:19,0:18:48.17:954,48,0	1/1:23,0:23:47.20:1261,47,0	0/0:16,0:15:39.11:0,39,739	0/0:19,0:19:35.18:0,35,695	1/1:12,0:10:21.07:437,21,0	1/1:9,0:9:16.18:234,16,0	1/1:12,0:12:30.71:490,31,0	0/0:10,0:9:17.94:0,18,334	1/1:10,0:10:30.10:663,30,0	0/1:17,0:17:27.19:240,0,27	1/1:16,0:15:34:533,34,0	1/1:36,0:34:79.06:1348,79,0	1/1:16,0:15:29.48:408,29,0	1/1:15,0:14:38.36:683,38,0	1/1:10,0:10:15.90:146,16,0	1/1:7,21:29:9.59:72,10,0	1/1:3,0:3:9.03:179,9,0	0/0:5,0:5:1.29:0,1,61	0/0:42,0:38:87.11:0,87,1707	1/1:11,0:11:18.85:321,19,0	1/1:18,0:17:39.72:673,40,0	1/1:13,0:13:26.91:471,27,0	1/1:10,0:10:23.94:302,24,0
chr10	64047986	.	C	CGG	630.88	PASS	AB=0.557;AC=3;AF=0.054;AN=56;BaseQRankSum=1.196;DP=556;FS=0.716;HRun=5;HaplotypeScore=89.9020;InbreedingCoeff=0.5973;MQ=63.78;MQ0=17;MQRankSum=-0.920;QD=10.88;ReadPosRankSum=-0.866;VQSLOD=-0.5428;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:7,0:33:48.20:67,0,48	0/0:10,0:10:27.08:0,27,321	0/0:49,0:17:35.15:0,35,329	0/0:49,0:19:7.98:0,8,179	0/0:19,0:20:41.82:0,42,457	0/0:11,0:11:33.09:0,33,390	0/0:19,0:18:54.16:0,54,665	1/1:9,13:24:48.56:670,49,0	0/0:10,0:10:15.03:0,15,183	0/0:18,0:19:47.79:0,48,519	0/0:24,0:24:60.01:0,60,683	0/0:14,0:13:21.03:0,21,253	0/0:7,0:6:15.05:0,15,190	0/0:11,0:11:24.06:0,24,301	0/0:16,0:16:30.06:0,30,348	0/0:16,0:15:30.09:0,30,372	0/0:29,0:29:60.15:0,60,722	0/0:20,0:20:42.09:0,42,484	0/0:20,0:17:27.07:0,27,328	0/0:18,0:17:33.02:0,33,360	0/0:22,0:22:36.08:0,36,442	0/0:17,0:17:39.04:0,39,456	0/0:13,0:13:29.64:0,30,310	0/0:26,0:26:69.08:0,69,828	0/0:13,0:13:24.07:0,24,297	0/0:18,0:18:39.10:0,39,460	0/0:12,0:12:33.08:0,33,395	0/0:13,0:13:33.10:0,33,405
chr10	64048206	.	TC	T	6094.74	PASS	AC=52;AF=0.963;AN=54;BaseQRankSum=-0.719;DP=300;FS=0.000;HRun=7;HaplotypeScore=75.5842;InbreedingCoeff=0.4384;MQ=39.06;MQ0=8;MQRankSum=2.344;QD=21.69;ReadPosRankSum=0.076;VQSLOD=4.3259;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,21:24:56.78:498,57,0	1/1:1,2:3:6.01:61,6,0	./.	0/0:9,0:2:3:0,3,29	1/1:0,12:12:36.01:351,36,0	1/1:2,8:10:24.05:245,24,0	1/1:2,15:16:27.06:274,27,0	1/1:6,7:13:18.04:183,18,0	1/1:2,13:15:39.09:395,39,0	1/1:0,8:8:18.04:183,18,0	1/1:0,5:4:12.03:121,12,0	1/1:3,16:19:44.71:456,45,0	1/1:0,6:5:12.03:122,12,0	1/1:1,6:7:18.04:182,18,0	1/1:1,10:11:29.88:293,30,0	1/1:0,8:8:24.05:245,24,0	1/1:4,9:13:2.06:208,2,0	1/1:4,4:8:11.99:111,12,0	1/1:1,12:13:32.74:336,33,0	1/1:1,6:7:12.03:122,12,0	1/1:4,12:15:29.67:271,30,0	1/1:0,4:4:9.02:92,9,0	1/1:0,5:5:15.03:153,15,0	1/1:1,10:11:14.90:140,15,0	1/1:1,12:12:17.90:148,18,0	1/1:0,16:15:45.10:458,45,0	1/1:2,12:14:36.02:354,36,0	1/1:0,3:3:9.02:92,9,0
chr10	64049686	.	GCT	G	15769.11	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=6.059;DP=773;FS=1.740;HRun=0;HaplotypeScore=107.1738;InbreedingCoeff=0.9794;MQ=78.13;MQ0=12;MQRankSum=-1.284;QD=27.00;ReadPosRankSum=3.346;VQSLOD=6.3170;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,30:39:75.24:946,75,0	1/1:1,7:7:9.03:114,9,0	0/0:43,0:30:37.46:0,37,700	0/0:62,1:45:13.91:0,14,702	1/1:3,17:20:48.15:594,48,0	1/1:5,8:13:24.08:303,24,0	1/1:5,20:25:51.16:642,51,0	1/1:5,25:30:75.04:879,75,0	1/1:2,27:29:72.23:908,72,0	1/1:7,35:41:99:1219,99,0	1/1:2,18:20:42.09:505,42,0	1/1:4,27:30:75.24:939,75,0	0/0:27,0:27:57.12:0,57,886	1/1:6,22:28:54.17:681,54,0	1/1:6,27:33:63.20:794,63,0	1/1:2,25:26:54.17:681,54,0	1/1:3,25:28:69.22:870,69,0	1/1:2,21:23:47.35:613,47,0	1/1:5,18:23:54.12:649,54,0	1/1:4,17:21:42.02:470,42,0	1/1:5,38:42:96.31:1211,96,0	1/1:4,24:28:63.20:794,63,0	0/0:23,0:23:66.21:0,66,1069	0/0:33,0:33:93.32:0,93,1545	1/1:3,15:19:36.12:454,36,0	1/1:5,21:26:66.11:785,66,0	1/1:1,17:18:39.12:492,39,0	1/1:2,7:9:18.06:227,18,0
chr10	64057478	.	GA	G	16440.24	PASS	AB=1.000;AC=47;AF=0.839;AN=56;BaseQRankSum=4.535;DP=610;FS=1.533;HRun=4;HaplotypeScore=61.0417;InbreedingCoeff=0.9247;MQ=72.58;MQ0=0;MQRankSum=-4.885;QD=30.17;ReadPosRankSum=2.454;VQSLOD=5.1017;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,29:34:81.25:971,81,0	1/1:0,12:12:30.09:360,30,0	0/1:13,0:13:1.52:2,0,330	0/0:13,0:13:35.87:0,36,399	1/1:1,33:34:99:1170,99,0	1/1:3,17:20:36.11:432,36,0	1/1:2,24:26:72.17:847,72,0	1/1:4,32:36:96.28:1139,96,0	1/1:2,25:27:72.22:861,72,0	1/1:0,14:14:42.05:473,42,0	1/1:0,14:14:39.12:467,39,0	1/1:0,22:22:66.20:792,66,0	0/0:19,0:19:54.18:0,54,755	1/1:2,24:26:60.18:718,60,0	1/1:1,24:25:57.17:684,57,0	1/1:1,20:21:48.15:576,48,0	1/1:0,21:21:45.14:540,45,0	1/1:2,15:17:51.05:577,51,0	1/1:0,19:19:51.16:610,51,0	1/1:2,20:22:57.17:684,57,0	1/1:1,26:27:66.20:792,66,0	1/1:1,10:11:30.09:360,30,0	0/0:16,0:16:48.16:0,48,671	0/0:17,0:17:45.15:0,45,630	1/1:0,26:26:69.21:827,69,0	1/1:1,27:28:78.21:913,78,0	1/1:0,32:32:87.26:1034,87,0	1/1:0,18:18:51.16:612,51,0
chr10	64061498	.	TACACACAC	T	2155.38	PASS	AB=0.885;AC=32;AF=0.640;AN=50;BaseQRankSum=2.699;DP=502;FS=3.191;HRun=0;HaplotypeScore=119.8054;InbreedingCoeff=0.4589;MQ=67.90;MQ0=16;MQRankSum=-5.118;QD=7.78;ReadPosRankSum=0.033;VQSLOD=2.4957;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:9.03:0,9,337	1/1:4,2:6:3.01:74,3,0	./.	./.	0/0:14,0:17:18.06:0,18,446	1/1:14,3:17:3.01:74,3,0	1/1:15,0:15:3.01:67,3,0	0/0:17,0:17:9.03:0,9,270	0/0:11,0:14:14.98:0,15,140	1/1:6,0:7:3.01:56,3,0	1/1:19,2:21:11.98:168,12,0	1/1:18,0:27:21.06:378,21,0	0/0:25,0:25:19.42:0,19,607	0/1:14,2:16:10.05:85,0,10	1/1:22,6:28:6.02:149,6,0	1/1:16,5:23:20.96:425,21,0	0/1:21,1:21:15.03:108,0,15	1/1:4,2:7:6.02:130,6,0	1/1:13,0:13:3:28,3,0	1/1:6,4:10:9:133,9,0	./.	0/1:10,0:14:0:0,0,0	0/0:7,0:8:12.04:0,12,375	0/0:21,0:26:24.08:0,24,734	1/1:8,1:9:3.01:74,3,0	0/1:16,1:17:47.84:69,0,48	1/1:11,0:11:2.99:23,3,0	1/1:6,5:11:12.04:279,12,0
chr10	64061818	.	T	TC	15832.05	PASS	AB=1.000;AC=47;AF=0.839;AN=56;BaseQRankSum=-9.173;DP=597;FS=10.525;HRun=1;HaplotypeScore=67.0142;InbreedingCoeff=0.8796;MQ=79.77;MQ0=1;MQRankSum=-1.519;QD=30.86;ReadPosRankSum=3.416;VQSLOD=3.4330;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,40:40:78.25:1047,78,0	1/1:0,3:3:9.03:122,9,0	0/1:31,0:21:6.09:6,0,181	0/0:34,0:24:19.07:0,19,250	1/1:0,32:32:93.10:1186,93,0	1/1:2,23:25:63.21:858,63,0	1/1:0,16:16:30.10:409,30,0	1/1:16,18:35:99:1216,102,0	1/1:1,9:10:30.09:393,30,0	1/1:1,19:20:57.10:749,57,0	1/1:2,13:15:37.24:499,37,0	1/1:1,17:18:36.12:489,36,0	0/0:23,0:23:66.13:0,66,777	1/1:0,20:20:57.19:776,57,0	1/1:0,15:15:36.12:490,36,0	1/1:0,16:16:48.16:654,48,0	1/1:1,24:26:60.18:800,60,0	1/1:1,12:13:28.78:456,29,0	1/1:4,21:25:63.12:806,63,0	1/1:1,17:18:51.10:665,51,0	1/1:0,21:21:45.15:613,45,0	1/1:0,18:18:39.13:529,39,0	0/0:16,0:16:31.31:0,31,429	0/0:11,0:11:26.90:0,27,370	1/1:1,23:24:58.38:813,58,0	1/1:1,26:27:79.01:955,79,0	1/1:1,30:31:61.35:855,61,0	1/1:0,14:14:33.11:447,33,0
chr10	64061837	.	G	GT	1455.54	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-2.747;DP=599;FS=25.675;HRun=5;HaplotypeScore=109.8002;InbreedingCoeff=0.9857;MQ=80.52;MQ0=1;MQRankSum=-1.681;QD=29.70;ReadPosRankSum=-3.435;VQSLOD=1.0265;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:72.17:0,72,773	0/0:5,0:5:15.03:0,15,155	0/0:33,0:23:30.05:0,30,402	0/0:40,0:30:31.23:0,31,392	0/0:36,0:36:99:0,102,1049	0/0:27,0:27:40.75:0,41,604	0/0:18,0:18:39.02:0,39,384	1/1:6,31:37:90.29:1183,90,0	1/1:2,10:12:30.10:394,30,0	0/0:19,0:19:54.12:0,54,567	0/0:12,0:12:33.08:0,33,354	0/0:17,0:17:39.07:0,39,409	0/0:18,0:18:51.13:0,51,548	0/0:17,0:17:39.06:0,39,402	0/0:15,0:15:39.07:0,39,404	0/0:18,0:18:51.10:0,51,533	0/0:26,0:26:60.15:0,60,645	0/0:14,0:14:18.16:0,18,365	0/0:23,0:23:51.10:0,51,534	0/0:22,0:22:60.14:0,60,636	0/0:21,0:21:39.07:0,39,410	0/0:16,0:16:42.08:0,42,439	0/0:16,0:16:48.12:0,48,515	0/0:14,0:14:39.07:0,39,409	0/0:24,0:24:63.14:0,63,668	0/0:25,0:25:75.17:0,75,791	0/0:25,0:25:50.98:0,51,548	0/0:11,0:11:24.03:0,24,247
chr10	64062811	.	A	AG	1476.83	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-9.969;DP=692;FS=9.431;HRun=1;HaplotypeScore=82.1138;InbreedingCoeff=0.9881;MQ=84.18;MQ0=0;MQRankSum=-3.597;QD=42.20;ReadPosRankSum=-5.005;VQSLOD=1.1477;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,138,1790	0/0:7,0:7:21.07:0,21,273	0/0:20,0:20:58.07:0,58,736	0/0:21,0:21:63.20:0,63,815	0/0:27,0:27:81.26:0,81,1052	0/0:28,0:28:84.27:0,84,1091	0/0:27,0:27:81.26:0,81,1052	1/1:0,35:35:99:1572,105,0	0/0:26,0:26:75.24:0,75,973	0/0:29,0:29:78.24:0,78,1000	0/0:29,0:29:78.25:0,78,1013	0/0:32,0:32:96.29:0,96,1219	0/0:20,0:20:57.19:0,57,740	0/0:22,0:22:66.20:0,66,842	0/0:29,0:29:84.27:0,84,1091	0/0:19,0:19:54.18:0,54,701	0/0:30,0:30:90.28:0,90,1154	0/0:20,0:20:54.18:0,54,701	0/0:29,0:29:81.25:0,81,1038	0/0:28,0:28:81.26:0,81,1052	0/0:21,0:21:60.19:0,60,778	0/0:26,0:26:78.24:0,78,999	0/0:16,0:16:48.13:0,48,595	0/0:23,0:23:69.18:0,69,877	0/0:23,0:23:69.22:0,69,894	0/0:23,0:23:66.21:0,66,857	0/0:27,0:27:78.24:0,78,993	0/0:9,0:9:18.06:0,18,234
chr10	64064176	.	A	AT	321.44	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=-0.129;DP=525;FS=12.034;HRun=10;HaplotypeScore=55.1822;InbreedingCoeff=0.6221;MQ=68.48;MQ0=0;MQRankSum=-0.856;QD=10.37;ReadPosRankSum=0.146;VQSLOD=1.0729;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,19:22:39.10:416,39,0	0/0:4,0:4:8.98:0,9,71	0/0:12,0:12:8.42:0,8,125	0/1:9,0:9:0.77:1,0,85	0/0:26,0:26:56.88:0,57,465	0/0:33,0:34:73.84:0,74,591	0/0:9,0:9:20.97:0,21,172	0/0:32,0:33:67.88:0,68,543	0/0:21,0:21:41.89:0,42,345	0/0:17,0:17:29.91:0,30,246	0/0:20,0:20:48.40:0,48,393	0/0:17,0:17:38.92:0,39,320	0/0:17,0:17:35.91:0,36,295	0/0:17,0:17:29.87:0,30,243	0/0:19,0:19:38.88:0,39,320	0/0:17,0:17:44.89:0,45,364	0/0:19,0:19:44.89:0,45,365	0/0:18,0:18:44.92:0,45,366	0/0:21,0:21:31.89:0,32,252	0/0:26,0:27:49.87:0,50,396	0/0:12,0:12:17.90:0,18,142	0/0:15,0:15:32.91:0,33,267	0/0:16,2:18:9.90:0,10,284	0/0:22,0:22:53.92:0,54,442	0/0:20,0:20:50.13:0,50,401	0/0:13,0:13:23.93:0,24,197	0/0:35,0:35:80.81:0,81,664	0/0:9,0:9:5.94:0,6,49
chr10	64064370	.	CT	C	1632.66	PASS	AB=0.762;AC=39;AF=0.696;AN=56;BaseQRankSum=-1.682;DP=490;FS=1.305;HRun=17;HaplotypeScore=61.3951;InbreedingCoeff=0.1363;MQ=64.78;MQ0=15;MQRankSum=0.034;QD=3.92;ReadPosRankSum=3.450;VQSLOD=0.2246;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:21:7.39:25,7,0	1/1:4,4:8:13.23:71,13,0	0/0:34,1:14:18.93:0,19,89	0/0:25,1:8:0.62:0,1,44	0/1:19,5:25:26.33:85,0,26	0/1:18,2:20:40.56:41,0,50	1/1:1,4:5:11.70:67,12,0	1/1:11,0:26:22.73:81,23,0	1/1:3,0:9:10.15:29,10,0	1/1:10,9:19:15.86:91,16,0	1/1:13,13:28:0.21:62,0,0	1/1:5,4:9:12.71:62,13,0	0/1:8,0:9:0.53:1,0,48	0/1:5,4:9:15.18:24,0,15	1/1:6,9:14:17.98:101,18,0	0/1:7,9:16:22.99:87,0,23	0/1:15,7:21:22.67:149,0,23	1/1:20,2:21:21.53:146,22,0	0/1:7,5:10:4.54:51,0,5	0/1:13,8:22:32.67:60,0,33	1/1:2,0:1:2.04:6,2,0	1/1:0,1:1:2.92:17,3,0	0/0:6,0:4:8.97:0,9,70	0/0:6,1:7:8.71:0,9,58	1/1:14,14:28:6.96:153,7,0	1/1:15,5:17:16.30:84,16,0	1/1:9,15:29:30.35:145,30,0	0/1:17,11:29:21.33:162,0,21
chr10	64064771	.	T	TGA	12006.09	PASS	AB=0.582;AC=31;AF=0.554;AN=56;BaseQRankSum=-13.179;DP=585;FS=0.390;HRun=0;HaplotypeScore=68.3398;InbreedingCoeff=0.5322;MQ=69.14;MQ0=4;MQRankSum=-1.039;QD=30.17;ReadPosRankSum=2.140;VQSLOD=6.2254;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:74.98:0,75,831	0/1:3,11:15:3.58:453,0,4	0/0:27,0:24:29.63:0,30,328	0/0:27,0:23:35.57:0,36,368	0/0:20,0:21:45.13:0,45,538	1/1:3,19:22:30.81:667,31,0	1/1:6,11:17:30.10:486,30,0	0/0:14,0:14:24.07:0,24,283	0/0:13,0:13:33.10:0,33,403	1/1:8,17:25:54.16:845,54,0	1/1:12,19:32:57.19:918,57,0	0/1:6,16:22:22.14:679,0,22	0/0:20,0:20:51.16:0,51,623	1/1:6,13:19:36.12:584,36,0	1/1:8,27:34:62.88:1022,63,0	1/1:3,18:21:42.14:681,42,0	0/1:4,14:18:3.51:453,0,4	0/1:5,14:19:31.17:542,0,31	1/1:7,17:24:54.18:858,54,0	1/1:8,14:22:51.14:779,51,0	0/1:8,14:22:85.57:536,0,86	0/1:7,12:19:10.48:494,0,10	0/0:21,0:21:42.10:0,42,497	0/0:12,0:13:23.90:0,24,270	1/1:1,11:12:30.10:486,30,0	1/1:7,13:20:8.48:641,8,0	0/1:5,14:19:31.16:542,0,31	1/1:4,9:13:21.07:341,21,0
chr10	64065071	.	TTCTTGTTTTG	T	1527.50	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.961;DP=581;FS=2.472;HRun=0;HaplotypeScore=182.6099;InbreedingCoeff=0.9991;MQ=67.04;MQ0=4;MQRankSum=-1.997;QD=50.92;ReadPosRankSum=-3.092;VQSLOD=2.9946;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:99:0,99,4496	0/0:13,0:13:39.13:0,39,1978	0/0:29,0:20:54.03:0,54,1494	0/0:24,0:14:33.81:0,34,874	0/0:27,0:27:81.15:0,81,3444	0/0:21,0:21:60.16:0,60,2701	0/0:16,0:16:48.13:0,48,1999	1/1:0,30:30:86.87:1622,87,0	0/0:13,0:13:39.05:0,39,1731	0/0:23,0:23:69.23:0,69,3539	0/0:38,0:38:99:0,114,5308	0/0:13,0:13:39.13:0,39,2078	0/0:14,0:14:42.10:0,42,1805	0/0:12,0:12:36.11:0,36,1653	0/0:23,0:23:69.21:0,69,3040	0/0:13,0:13:39.12:0,39,1943	0/0:24,0:23:72.21:0,72,3460	0/0:17,0:17:48.13:0,48,2285	0/0:18,0:17:48.14:0,48,2279	0/0:32,0:32:96.27:0,96,4236	0/0:18,0:18:51.10:0,51,1946	0/0:25,0:25:72.25:0,72,3550	0/0:19,0:19:57.16:0,57,2662	0/0:18,0:18:51.09:0,51,2018	0/0:13,0:13:39.09:0,39,1673	0/0:22,0:22:66.17:0,66,2537	0/0:20,0:20:57.14:0,57,2476	0/0:12,0:12:35.96:0,36,1501
chr10	64065272	.	A	AACATATACATATAACATAAC	4379.43	PASS	AB=0.952;AC=3;AF=0.054;AN=56;BaseQRankSum=-1.203;DP=685;FS=0.000;HRun=0;HaplotypeScore=339.3578;InbreedingCoeff=0.6463;MQ=91.04;MQ0=0;MQRankSum=-6.808;QD=112.29;ReadPosRankSum=1.502;VQSLOD=3.3660;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:72.23:0,72,3616	0/0:9,0:9:27.09:0,27,1413	0/0:27,0:27:78.27:0,78,2624	0/0:30,0:30:77.90:0,78,3243	0/0:28,0:28:84.28:0,84,4478	0/0:34,0:34:93.32:0,93,4718	0/0:20,0:20:60.19:0,60,3251	0/0:34,0:34:99:0,99,4096	1/1:9,8:19:45.15:4145,45,0	0/0:23,0:23:69.23:0,69,3430	0/0:29,0:29:84.27:0,84,4308	0/0:39,0:39:99:0,114,6134	0/0:22,0:22:63.22:0,63,3413	0/0:27,0:27:81.20:0,81,4153	0/0:32,0:32:96.33:0,96,5227	0/1:19,1:20:99:234,0,2765	0/0:18,0:18:54.15:0,54,2687	0/0:19,0:19:54.19:0,54,2830	0/0:13,0:13:36.12:0,36,2019	0/0:32,0:32:96.32:0,96,4945	0/0:28,0:28:81.26:0,81,4106	0/0:26,0:26:78.27:0,78,4341	0/0:23,0:23:66.23:0,66,3683	0/0:25,0:25:72.24:0,72,3610	0/0:15,0:15:45.15:0,45,2455	0/0:38,0:38:99:0,114,6033	0/0:22,0:22:66.23:0,66,3544	0/0:8,0:8:24.08:0,24,1348
chr10	64070136	.	C	CT	709.73	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-6.485;DP=645;FS=10.578;HRun=9;HaplotypeScore=61.4863;InbreedingCoeff=0.9839;MQ=75.34;MQ0=1;MQRankSum=-1.377;QD=19.18;ReadPosRankSum=1.132;VQSLOD=3.5971;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,30:37:52.63:805,53,0	0/0:8,0:8:24:0,24,208	0/0:12,0:12:21.07:0,21,250	0/0:13,0:13:29.86:0,30,242	0/0:20,0:20:47.98:0,48,416	0/0:31,0:31:80.97:0,81,703	0/0:21,0:21:50.98:0,51,443	0/0:29,1:30:41.77:0,42,589	0/0:26,0:26:71.94:0,72,616	0/0:23,0:23:68.99:0,69,599	0/0:27,0:27:68.93:0,69,592	0/0:27,0:27:71.97:0,72,625	0/0:32,0:31:80.95:0,81,697	0/0:28,0:28:74.96:0,75,647	0/0:27,0:27:67.69:0,68,597	0/0:19,1:20:17.79:0,18,380	0/0:23,0:23:62.99:0,63,547	0/0:15,0:15:41.99:0,42,365	0/0:27,0:27:62.92:0,63,537	0/0:33,1:34:59.76:0,60,741	0/0:18,0:18:41.94:0,42,357	0/0:19,0:19:53.97:0,54,466	0/0:19,0:20:56.01:0,56,474	0/0:24,0:24:65.96:0,66,569	0/0:16,0:16:38.96:0,39,335	0/0:25,0:26:68.01:0,68,576	0/0:31,0:31:86.95:0,87,747	0/0:10,0:10:26.99:0,27,232
chr10	64070572	.	GCGAGTAGAGGTAGACAGA	G	2111.49	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.558;DP=705;FS=3.573;HRun=0;HaplotypeScore=327.2409;InbreedingCoeff=0.9796;MQ=87.12;MQ0=0;MQRankSum=-6.557;QD=87.98;ReadPosRankSum=-0.894;VQSLOD=2.5938;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,147,11693	0/0:7,0:7:21.07:0,21,1850	0/0:15,0:15:45.15:0,45,2860	0/0:35,0:35:99:0,102,7043	1/1:6,18:24:45.15:2206,45,0	0/0:22,0:22:66.23:0,66,5492	0/0:24,0:24:69.24:0,69,5287	0/0:24,0:23:72.20:0,72,5350	0/0:30,0:30:90.31:0,90,6895	0/0:27,0:27:81.28:0,81,6509	0/0:18,0:18:54.19:0,54,4331	0/0:25,0:25:75.26:0,75,6337	0/0:23,0:23:66.23:0,66,5637	0/0:30,0:30:90.23:0,90,6789	0/0:24,0:24:66.23:0,66,4937	0/0:26,0:26:78.27:0,78,6774	0/0:28,0:28:84.24:0,84,6426	0/0:25,0:25:75.26:0,75,6633	0/0:26,0:26:78.27:0,78,5517	0/0:39,0:39:99:0,117,9465	0/0:40,0:40:99:0,117,8858	0/0:24,0:24:63.22:0,63,5049	0/0:11,0:11:27.09:0,27,1966	0/0:22,0:22:66.23:0,66,5542	0/0:17,0:17:51.17:0,51,4185	0/0:34,0:34:99:0,99,8263	0/0:31,0:31:84.29:0,84,6452	0/0:5,0:4:15.05:0,15,1059
chr10	64073961	.	GA	G	377.28	PASS	AB=0.645;AC=1;AF=0.018;AN=56;BaseQRankSum=5.058;DP=522;FS=12.575;HRun=7;HaplotypeScore=49.0736;InbreedingCoeff=-0.0219;MQ=76.75;MQ0=1;MQRankSum=-0.287;QD=9.43;ReadPosRankSum=1.054;VQSLOD=0.3569;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:69.19:0,69,840	0/0:3,0:3:9.03:0,9,113	0/0:14,0:14:33.07:0,33,378	0/0:11,0:10:17:0,17,150	0/0:9,0:9:27.09:0,27,339	0/0:23,0:23:69.22:0,69,868	0/0:17,0:17:48.15:0,48,603	0/0:24,0:24:63.20:0,63,791	0/0:30,0:30:90.29:0,90,1132	0/0:24,0:24:72.23:0,72,906	0/0:12,0:12:30.09:0,30,371	0/0:13,0:13:36.10:0,36,440	0/0:19,0:19:54.17:0,54,679	0/0:19,0:19:51.16:0,51,642	0/1:18,22:40:99:452,0,456	0/0:15,0:15:39.11:0,39,478	0/0:30,0:30:81.21:0,81,977	0/0:30,0:30:84.22:0,84,1038	0/0:9,0:9:24.07:0,24,291	0/0:13,0:13:30.09:0,30,365	0/0:14,0:14:42.13:0,42,528	0/0:4,0:4:12.04:0,12,150	0/0:20,0:20:57.59:0,58,662	0/0:14,0:14:41.80:0,42,501	0/0:23,0:23:66.18:0,66,804	0/0:22,0:22:63.19:0,63,781	0/0:27,0:27:78.24:0,78,969	0/0:18,0:18:54.17:0,54,679
chr10	64074377	.	AGTACCAAT	A	1543.60	PASS	AB=0.757;AC=2;AF=0.036;AN=56;BaseQRankSum=7.392;DP=699;FS=56.774;HRun=0;HaplotypeScore=170.7355;InbreedingCoeff=-0.0371;MQ=83.14;MQ0=0;MQRankSum=-7.943;QD=20.31;ReadPosRankSum=1.546;VQSLOD=1.2211;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:21:60.21:0,60,2432	0/0:12,0:12:33.11:0,33,1381	0/0:21,0:22:57.20:0,57,2182	0/0:19,0:19:39.10:0,39,1286	0/0:32,0:31:90.31:0,90,3766	0/0:23,0:23:66.23:0,66,2804	0/0:22,0:22:60.21:0,60,2582	0/0:34,0:34:90.30:0,90,3830	0/1:20,11:31:99:755,0,2203	0/0:23,0:23:66.23:0,66,2903	0/0:23,0:23:63.22:0,63,2714	0/0:25,0:25:72.25:0,72,3022	0/0:24,0:24:69.24:0,69,2988	0/0:20,0:20:54.19:0,54,2324	0/1:32,13:45:99:878,0,3111	0/0:33,0:33:93.29:0,93,3913	0/0:21,0:21:63.22:0,63,2666	0/0:20,0:20:57.20:0,57,2404	0/0:17,0:17:42.14:0,42,1733	0/0:34,0:34:99:0,102,4318	0/0:29,0:29:84.29:0,84,3535	0/0:14,0:14:36.12:0,36,1503	0/0:23,0:23:63.22:0,63,2698	0/0:19,0:19:51.18:0,51,2187	0/0:25,0:25:75.26:0,75,3099	0/0:30,0:30:87.30:0,87,3726	0/0:42,0:42:99:0,126,5186	0/0:16,0:16:48.16:0,48,1830
chr10	64076307	.	G	GC	1020.29	PASS	AB=0.749;AC=14;AF=0.259;AN=54;BaseQRankSum=6.970;DP=317;FS=164.764;HRun=0;HaplotypeScore=52.3887;InbreedingCoeff=-0.3963;MQ=67.60;MQ0=0;MQRankSum=-8.841;QD=6.89;ReadPosRankSum=1.280;VQSLOD=0.5313;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:23.99:0,24,291	0/1:1,3:4:29.81:112,0,30	0/0:5,0:5:15.04:0,15,189	0/0:7,0:7:12.03:0,12,145	0/0:4,0:4:9.03:0,9,122	./.	0/1:22,8:30:91.20:91,0,838	0/1:6,1:7:32.77:33,0,150	0/0:5,1:6:14.65:0,15,209	0/1:7,6:13:99:242,0,213	0/1:4,4:8:26.34:26,0,111	0/0:7,3:10:6.48:0,6,214	0/1:1,4:5:33.08:63,0,33	0/1:5,1:6:23.20:23,0,150	0/1:4,1:5:23.21:23,0,131	0/0:1,0:1:3.01:0,3,42	0/0:29,3:31:13.41:0,13,1091	0/1:22,2:24:22.68:23,0,846	0/1:6,3:9:99:115,0,223	0/0:3,1:4:9.03:0,9,126	0/0:49,2:51:99:0,116,1526	0/1:3,1:4:28.50:29,0,114	0/0:5,3:8:2.07:0,2,150	0/0:23,1:24:69.14:0,69,915	0/1:8,4:12:99:113,0,261	0/1:8,7:15:99:245,0,254	0/1:4,2:6:31.95:32,0,153	0/0:4,0:4:11.99:0,12,145
chr10	64077305	.	G	GTATTT	1963.37	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-5.674;DP=711;FS=0.000;HRun=0;HaplotypeScore=141.2038;InbreedingCoeff=0.9979;MQ=89.22;MQ0=0;MQRankSum=-3.832;QD=72.72;ReadPosRankSum=-4.488;VQSLOD=3.4814;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:84.26:0,84,1728	0/0:15,0:15:42.14:0,42,895	0/0:27,0:27:60:0,60,1091	0/0:28,0:28:69.16:0,69,1284	0/0:24,0:24:63.19:0,63,1298	0/0:21,0:20:54.17:0,54,1111	0/0:27,0:27:72.25:0,72,1472	1/1:6,16:27:81.20:2058,81,0	0/0:28,0:28:78.27:0,78,1662	0/0:28,0:27:78.25:0,78,1624	0/0:21,0:21:60.19:0,60,1178	0/0:18,0:18:51.18:0,51,1087	0/0:17,0:17:51.14:0,51,990	0/0:29,0:29:78.25:0,78,1623	0/0:43,0:43:99:0,123,2567	0/0:38,0:38:99:0,111,2326	0/0:28,0:28:81.25:0,81,1682	0/0:21,0:21:57.20:0,57,1213	0/0:18,0:18:51.17:0,51,1087	0/0:20,0:20:54.17:0,54,1096	0/0:54,0:54:99:0,160,3285	0/0:25,0:25:66.23:0,66,1393	0/0:21,0:21:57.20:0,57,1215	0/0:18,0:18:51.13:0,51,1043	0/0:17,0:17:48.16:0,48,1021	0/0:31,0:31:93.31:0,93,1931	0/0:25,0:25:72.25:0,72,1515	0/0:9,0:9:24.07:0,24,473
chr10	64081066	.	A	AG	8226.06	PASS	AB=0.900;AC=54;AF=0.964;AN=56;BaseQRankSum=-3.546;DP=335;FS=1.530;HRun=3;HaplotypeScore=79.0018;InbreedingCoeff=-0.0593;MQ=55.43;MQ0=0;MQRankSum=-4.367;QD=24.56;ReadPosRankSum=2.607;VQSLOD=4.2588;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,19:18:27.09:374,27,0	1/1:0,6:6:12.04:168,12,0	0/1:9,0:9:85.32:85,0,89	0/1:6,2:8:26.02:135,0,26	1/1:0,13:13:6.02:84,6,0	1/1:1,13:13:21.07:294,21,0	1/1:1,19:20:33.05:461,33,0	1/1:0,15:15:45.15:626,45,0	1/1:0,9:9:18.06:249,18,0	1/1:0,5:5:15.05:210,15,0	1/1:2,9:11:6.49:85,6,0	1/1:2,12:14:33.11:458,33,0	1/1:3,18:21:45.15:625,45,0	1/1:0,9:8:5.98:62,6,0	1/1:1,11:12:24.04:314,24,0	1/1:1,13:14:33.08:440,33,0	1/1:1,11:11:27.05:354,27,0	1/1:4,5:9:21.05:276,21,0	1/1:2,12:14:39.10:523,39,0	1/1:2,10:12:18.06:252,18,0	1/1:2,8:10:12.04:168,12,0	1/1:1,12:13:9.03:126,9,0	1/1:2,11:13:20.98:249,21,0	1/1:2,4:6:9.01:105,9,0	1/1:1,14:15:33.11:461,33,0	1/1:1,14:15:45.11:604,45,0	1/1:4,9:13:24.08:329,24,0	1/1:1,2:3:9.02:109,9,0
chr10	64082556	.	A	AT	11107.28	PASS	AB=1.000;AC=43;AF=0.768;AN=56;BaseQRankSum=-8.140;DP=556;FS=21.644;HRun=8;HaplotypeScore=81.0977;InbreedingCoeff=0.9042;MQ=66.87;MQ0=3;MQRankSum=-0.464;QD=25.71;ReadPosRankSum=1.778;VQSLOD=3.4630;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:0,0:29:52.96:0,53,155	1/1:2,7:9:23.90:257,24,0	0/0:25,0:19:35.09:0,35,285	0/1:21,0:11:9.35:9,0,90	0/0:2,0:29:42.39:0,42,137	1/1:0,8:8:24.07:277,24,0	1/1:2,16:18:34.20:537,34,0	1/1:27,0:26:60.72:348,61,0	1/1:3,9:12:24.07:276,24,0	1/1:3,23:27:65.99:719,66,0	1/1:1,18:19:48.14:554,48,0	1/1:3,9:12:27.08:312,27,0	0/0:10,0:10:24.01:0,24,220	1/1:1,10:11:27.08:312,27,0	1/1:5,15:20:42.12:484,42,0	1/1:0,14:14:36.11:416,36,0	1/1:1,29:30:81.24:931,81,0	1/1:4,22:26:66.20:761,66,0	1/1:6,26:30:75.18:835,75,0	1/1:1,26:27:75.18:851,75,0	1/1:2,10:12:27.08:312,27,0	1/1:0,6:6:18.05:208,18,0	0/0:19,0:19:48.02:0,48,439	0/0:12,0:12:33.01:0,33,302	1/1:6,18:25:50.98:568,51,0	1/1:3,30:33:90.25:1027,90,0	1/1:4,30:34:60.91:943,61,0	1/1:2,5:7:15.04:173,15,0
chr10	64082564	.	T	TTC	1188.25	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=-6.365;DP=567;FS=3.881;HRun=0;HaplotypeScore=123.0170;InbreedingCoeff=0.5055;MQ=65.45;MQ0=4;MQRankSum=1.227;QD=33.01;ReadPosRankSum=-6.585;VQSLOD=3.5178;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:89.51:0,90,660	0/1:7,0:8:7.72:8,0,14	0/0:35,0:22:45.91:0,46,541	0/0:32,0:11:3.77:0,4,184	0/0:28,0:28:66.57:0,67,520	0/0:9,0:9:12.44:0,12,32	0/0:17,0:17:27.88:0,28,90	1/1:0,26:27:78.19:1281,78,0	0/0:10,0:10:8.72:0,9,47	0/0:28,0:28:28.06:0,28,171	0/0:19,0:19:27.56:0,28,90	0/0:11,0:11:17:0,17,63	0/0:10,0:10:30.08:0,30,404	0/0:11,0:11:19.97:0,20,82	0/0:16,0:16:18.05:0,18,72	0/0:16,0:16:24.51:0,25,97	0/0:30,0:30:35.24:0,35,119	0/0:25,0:25:32.67:0,33,124	0/0:31,0:30:28.01:0,28,178	0/0:30,0:30:32.21:0,32,178	0/0:9,0:9:13.99:0,14,36	0/0:10,0:10:21.33:0,21,132	0/0:19,0:19:51.16:0,51,724	0/0:12,0:12:36.08:0,36,502	0/0:20,0:20:5.18:0,5,62	0/0:30,0:30:48.10:0,48,147	0/0:33,0:33:49.90:0,50,197	0/0:5,0:5:7.77:0,8,20
chr10	64082746	.	AGTCT	A	15824.39	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=3.349;DP=613;FS=1.622;HRun=0;HaplotypeScore=125.0068;InbreedingCoeff=0.9791;MQ=61.14;MQ0=3;MQRankSum=-1.238;QD=32.56;ReadPosRankSum=2.100;VQSLOD=4.7166;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:20,28:48:93.25:1465,93,0	1/1:2,4:6:12.04:197,12,0	0/0:31,0:24:36.02:0,36,704	0/0:26,0:20:30.10:0,30,677	0/0:9,0:19:24.01:0,24,309	1/1:2,11:13:30.10:491,30,0	1/1:5,26:31:39.13:639,39,0	1/1:11,7:18:21.07:343,21,0	1/1:6,23:29:72.25:1176,72,0	1/1:5,19:24:57.04:908,57,0	1/1:2,8:10:21.07:344,21,0	1/1:4,15:19:39.13:639,39,0	0/0:13,0:13:33.10:0,33,756	1/1:8,18:26:57.19:919,57,0	1/1:3,15:18:51.05:730,51,0	1/1:5,13:18:48.12:744,48,0	1/1:13,31:44:95.95:1543,96,0	1/1:7,19:26:54.18:885,54,0	1/1:7,9:16:27.05:392,27,0	1/1:5,14:19:36.12:590,36,0	1/1:8,25:33:57.19:934,57,0	1/1:1,11:12:24.01:362,24,0	0/0:16,0:16:42.14:0,42,973	0/0:22,0:22:57.18:0,57,1314	1/1:8,7:14:30.09:465,30,0	1/1:7,22:29:66.21:1058,66,0	1/1:3,19:22:56.96:856,57,0	1/1:7,3:10:9.03:147,9,0
chr10	64082827	.	AT	A	14993.94	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=3.136;DP=544;FS=10.341;HRun=2;HaplotypeScore=68.8660;InbreedingCoeff=0.9841;MQ=73.62;MQ0=0;MQRankSum=-5.706;QD=33.10;ReadPosRankSum=1.205;VQSLOD=4.3097;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,38:42:99:1242,99,0	1/1:1,6:7:21.03:254,21,0	0/0:23,0:23:56.35:0,56,840	0/0:20,0:20:57.18:0,57,827	1/1:0,16:16:48.02:582,48,0	1/1:2,14:16:47.50:576,47,0	1/1:1,16:17:39.13:506,39,0	1/1:1,27:28:78.17:939,78,0	1/1:4,17:21:59.65:678,60,0	1/1:3,10:13:30.10:386,30,0	1/1:0,6:6:14.99:175,15,0	1/1:1,21:22:60.19:763,60,0	0/0:15,0:15:45.11:0,45,631	1/1:2,20:22:54.03:660,54,0	1/1:3,23:26:66.11:793,66,0	1/1:0,23:23:60.02:730,60,0	1/1:4,36:40:99:1435,117,0	1/1:4,18:22:63.03:725,63,0	1/1:0,10:10:30.03:343,30,0	1/1:0,14:14:42.03:505,42,0	1/1:0,30:30:75.24:973,75,0	1/1:0,6:6:15.01:175,15,0	0/0:5,0:5:12.04:0,12,180	0/0:28,0:28:81.22:0,81,1133	1/1:0,16:16:42.04:494,42,0	1/1:1,14:15:45.15:584,45,0	1/1:2,26:28:78.17:971,78,0	1/1:0,13:13:39.13:506,39,0
chr10	64083266	.	T	TACAC	6942.87	PASS	AB=0.802;AC=35;AF=0.673;AN=52;BaseQRankSum=-4.677;DP=658;FS=2.863;HRun=0;HaplotypeScore=134.3672;InbreedingCoeff=0.3676;MQ=64.51;MQ0=10;MQRankSum=-1.878;QD=14.34;ReadPosRankSum=-1.208;VQSLOD=4.5259;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:44:37.36:0,37,288	0/1:3,3:7:37.90:133,0,38	./.	./.	0/0:7,0:19:33.03:0,33,305	1/1:11,5:20:11.78:215,12,0	1/1:9,9:20:18.06:425,18,0	0/1:20,0:20:12.17:12,0,65	0/1:11,0:11:11.15:11,0,11	1/1:11,13:26:44.93:712,45,0	1/1:12,6:17:18.02:421,18,0	0/1:12,4:19:42.63:182,0,43	0/0:17,0:17:23.98:0,24,310	1/1:9,7:18:11.83:225,12,0	1/1:11,9:23:26.61:571,27,0	1/1:13,16:34:29.62:544,30,0	1/1:22,7:38:43.64:660,44,0	1/1:18,7:31:16.91:439,17,0	0/1:15,3:17:23.81:281,0,24	0/1:17,6:26:27.43:259,0,27	0/1:19,9:33:37.90:110,0,38	1/1:17,5:22:5.75:83,6,0	0/0:13,0:17:17.89:0,18,182	0/0:22,0:22:24.08:0,24,375	1/1:13,8:24:23.82:507,24,0	1/1:20,0:20:32.93:466,33,0	1/1:13,1:20:8.50:95,8,0	1/1:15,10:28:27.09:589,27,0
chr10	64084610	.	AAAAG	A	542.07	PASS	AB=1.000;AC=4;AF=0.071;AN=56;BaseQRankSum=5.903;DP=503;FS=0.978;HRun=0;HaplotypeScore=78.7060;InbreedingCoeff=0.4844;MQ=61.35;MQ0=12;MQRankSum=-3.283;QD=10.84;ReadPosRankSum=-3.860;VQSLOD=1.7111;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:39:99:0,105,2504	0/0:8,0:8:18.04:0,18,400	0/1:19,0:9:20.24:20,0,260	0/1:12,0:2:11.37:15,0,11	0/0:25,0:25:69.18:0,69,1535	0/0:20,0:20:60.19:0,60,1445	0/0:22,0:20:48.15:0,48,1132	1/1:2,17:18:41.97:621,42,0	0/0:10,0:10:27.09:0,27,622	0/0:18,0:18:45.11:0,45,961	0/0:19,0:19:57.19:0,57,1380	0/0:10,0:9:27.09:0,27,655	0/0:10,0:10:30.09:0,30,678	0/0:17,0:16:48.13:0,48,1021	0/0:19,0:19:54.17:0,54,1259	0/0:17,0:17:48.16:0,48,1170	0/0:42,0:40:99:0,110,2643	0/0:22,0:21:51.16:0,51,1198	0/0:17,0:17:51.17:0,51,1186	0/0:13,0:12:33.10:0,33,757	0/0:20,0:20:57.16:0,57,1323	0/0:13,0:12:33.08:0,33,650	0/0:14,0:14:27.08:0,27,638	0/0:28,0:27:75.25:0,75,1847	0/0:10,0:10:24.07:0,24,573	0/0:13,0:11:33.10:0,33,731	0/0:21,0:21:54.14:0,54,1126	0/0:5,0:5:15.05:0,15,353
chr10	64085442	.	G	GC	602.25	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-4.649;DP=579;FS=4.410;HRun=6;HaplotypeScore=69.8211;InbreedingCoeff=0.9890;MQ=75.58;MQ0=0;MQRankSum=-0.378;QD=26.18;ReadPosRankSum=-1.552;VQSLOD=3.3477;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,114,1140	0/0:10,0:10:30.07:0,30,306	0/0:14,0:14:22.98:0,23,236	0/0:14,0:12:29.86:0,30,275	1/1:3,20:23:60.01:697,60,0	0/0:25,0:25:72.14:0,72,727	0/0:29,0:29:75.17:0,75,765	0/0:25,0:25:69.13:0,69,690	0/0:11,0:11:24.05:0,24,245	0/0:27,0:27:78.17:0,78,794	0/0:18,0:18:48.11:0,48,490	0/0:14,0:14:42.10:0,42,429	0/0:15,0:15:45.10:0,45,459	0/0:15,0:15:39.08:0,39,398	0/0:9,0:9:27.06:0,27,275	0/0:15,0:15:39.09:0,39,398	0/0:46,0:46:99:0,129,1303	0/0:14,0:14:39.09:0,39,398	0/0:28,0:28:75.14:0,75,757	0/0:20,0:20:51.11:0,51,520	0/0:18,0:18:39.05:0,39,384	0/0:25,0:25:72.16:0,72,734	0/0:17,0:17:42.08:0,42,421	0/0:21,0:21:51.10:0,51,513	0/0:22,0:22:63.10:0,63,627	0/0:28,0:28:78.16:0,78,788	0/0:27,0:27:78.18:0,78,796	0/0:7,0:7:21.05:0,21,214
chr10	64087473	.	G	GA	257.89	PASS	AC=2;AF=0.037;AN=54;BaseQRankSum=-0.003;DP=582;FS=0.000;HRun=9;HaplotypeScore=65.7142;InbreedingCoeff=0.9294;MQ=58.33;MQ0=9;MQRankSum=-0.681;QD=12.28;ReadPosRankSum=-1.345;VQSLOD=2.7719;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:42:99:0,111,958	0/0:11,0:11:32.99:0,33,286	./.	0/0:18,2:8:11.67:0,12,87	0/0:25,0:25:53.97:0,54,468	0/0:14,0:16:37.04:0,37,292	0/0:24,0:24:65.90:0,66,556	0/0:13,0:12:26.97:0,27,232	0/0:19,0:19:35.96:0,36,309	0/0:20,0:19:41.98:0,42,364	0/0:15,0:15:35.98:0,36,312	0/0:14,0:14:29.98:0,30,260	0/0:21,0:21:44.97:0,45,389	0/0:19,0:19:32.97:0,33,286	0/0:19,0:19:41.94:0,42,361	0/0:11,0:12:26.02:0,26,214	0/0:41,1:42:83.76:0,84,951	0/0:22,0:22:56.98:0,57,495	0/0:18,0:18:39.75:0,40,306	0/0:21,0:21:44.96:0,45,387	0/0:28,0:28:59.93:0,60,513	1/1:8,13:20:13.83:345,14,0	0/0:22,0:21:53.97:0,54,468	0/0:19,0:19:53.03:0,53,449	0/0:14,0:14:32.99:0,33,286	0/0:28,0:28:59.96:0,60,518	0/0:23,1:25:16.82:0,17,360	0/0:9,0:9:20.98:0,21,179
chr10	64087594	.	G	GA	449.20	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.167;DP=557;FS=3.155;HRun=0;HaplotypeScore=60.6158;InbreedingCoeff=0.9979;MQ=83.63;MQ0=0;MQRankSum=-3.395;QD=24.96;ReadPosRankSum=0.355;VQSLOD=4.6271;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:96.32:0,96,1342	0/0:11,0:11:33.11:0,33,460	0/0:22,0:22:61.67:0,62,747	0/0:21,0:20:46.30:0,46,671	1/1:1,17:18:53.59:544,54,0	0/0:22,0:22:66.22:0,66,913	0/0:25,0:25:75.25:0,75,1049	0/0:31,0:31:90.29:0,90,1244	0/0:20,0:20:60.20:0,60,837	0/0:15,0:15:45.15:0,45,626	0/0:16,0:16:48.16:0,48,671	0/0:15,0:15:45.12:0,45,594	0/0:12,0:12:36.12:0,36,503	0/0:23,0:23:69.23:0,69,964	0/0:28,0:28:84.27:0,84,1156	0/0:10,0:10:30.09:0,30,401	0/0:26,0:26:78.26:0,78,1091	0/0:9,0:9:27.09:0,27,377	0/0:25,0:25:72.21:0,72,985	0/0:17,0:17:51.17:0,51,712	0/0:28,0:28:81.25:0,81,1114	0/0:17,0:17:48.16:0,48,665	0/0:21,0:21:63.21:0,63,875	0/0:21,0:21:63.21:0,63,873	0/0:18,0:18:54.18:0,54,753	0/0:17,0:17:48.16:0,48,671	0/0:25,0:25:72.24:0,72,1005	0/0:12,0:12:36.12:0,36,503
chr10	64087595	.	T	TA	528.58	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.560;DP=563;FS=0.000;HRun=0;HaplotypeScore=62.1604;InbreedingCoeff=0.9974;MQ=83.36;MQ0=0;MQRankSum=-3.785;QD=26.43;ReadPosRankSum=0.096;VQSLOD=4.2479;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:96.32:0,96,1342	0/0:11,0:11:33.09:0,33,444	0/0:20,0:21:53.58:0,54,639	0/0:22,0:21:43.26:0,43,632	1/1:3,17:20:56.63:623,57,0	0/0:22,0:22:66.22:0,66,923	0/0:25,0:25:75.25:0,75,1047	0/0:31,0:31:93.30:0,93,1287	0/0:21,0:21:60.20:0,60,839	0/0:15,0:15:45.13:0,45,595	0/0:17,0:17:48.16:0,48,671	0/0:15,0:15:45.15:0,45,628	0/0:12,0:12:36.12:0,36,504	0/0:23,0:23:69.23:0,69,963	0/0:28,0:28:81.27:0,81,1131	0/0:9,0:9:27.08:0,27,362	0/0:26,0:26:78.26:0,78,1091	0/0:9,0:9:27.09:0,27,378	0/0:25,0:25:75.23:0,75,1015	0/0:17,0:17:51.17:0,51,713	0/0:29,0:29:84.26:0,84,1155	0/0:18,0:18:51.16:0,51,694	0/0:21,0:21:63.19:0,63,863	0/0:22,0:22:63.21:0,63,881	0/0:19,0:19:54.18:0,54,755	0/0:16,0:16:48.16:0,48,672	0/0:25,0:25:75.23:0,75,1031	0/0:12,0:12:36.12:0,36,501
chr10	64088053	.	GGA	G	18941.42	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=14.552;DP=707;FS=7.485;HRun=0;HaplotypeScore=94.4411;InbreedingCoeff=0.9998;MQ=83.52;MQ0=0;MQRankSum=-5.602;QD=39.22;ReadPosRankSum=6.277;VQSLOD=6.9128;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:87.27:0,87,1556	1/1:0,11:11:33.11:486,33,0	0/0:23,0:23:63.11:0,63,1028	0/0:26,0:26:66.22:0,66,1135	0/0:29,0:29:87.30:0,87,1614	1/1:0,25:25:72.24:1060,72,0	1/1:0,28:28:75.25:1105,75,0	0/0:28,0:28:81.27:0,81,1476	0/0:23,0:23:69.23:0,69,1266	1/1:0,19:19:57.19:837,57,0	1/1:0,19:19:51.17:751,51,0	1/1:2,25:27:75.25:1104,75,0	0/0:23,0:23:66.23:0,66,1212	1/1:1,24:25:57.19:839,57,0	1/1:1,33:34:90.19:1325,90,0	1/1:0,27:27:75.25:1104,75,0	1/1:3,43:46:99:1693,117,0	1/1:0,14:14:42.14:618,42,0	1/1:1,20:21:60.20:882,60,0	1/1:1,18:19:42.14:618,42,0	1/1:1,63:64:99:2518,172,0	1/1:0,24:24:69.23:1014,69,0	0/0:23,0:23:69.22:0,69,1254	0/0:19,0:19:51.15:0,51,908	1/1:1,13:14:36.12:530,36,0	1/1:3,23:26:69.22:998,69,0	1/1:1,28:29:72.24:1060,72,0	1/1:1,10:11:27.09:397,27,0
chr10	64092235	.	G	GCACACACACACACA	7043.13	PASS	AB=0.664;AC=42;AF=0.808;AN=52;BaseQRankSum=-3.508;DP=472;FS=8.527;HRun=0;HaplotypeScore=162.9822;InbreedingCoeff=0.4848;MQ=58.77;MQ0=6;MQRankSum=-3.281;QD=18.83;ReadPosRankSum=-4.760;VQSLOD=1.2420;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:21,0:31:39.96:40,0,122	./.	1/1:29,0:22:2.60:10,3,0	0/0:34,0:20:12.04:0,12,293	0/1:4,0:16:9.10:38,0,9	1/1:10,1:15:6.02:344,6,0	1/1:15,0:24:6.02:182,6,0	1/1:21,0:20:23.55:566,24,0	1/1:7,0:17:6.02:251,6,0	1/1:11,2:16:12.49:393,12,0	1/1:9,4:15:2.28:171,2,0	1/1:5,2:16:0.47:1,0,0	0/0:17,0:21:57.20:0,57,1996	1/1:5,2:9:6.02:388,6,0	1/1:9,3:18:9.03:544,9,0	1/1:12,0:12:7.75:100,8,0	1/1:18,2:20:26.41:1082,26,0	1/1:13,0:16:3.01:114,3,0	1/1:16,0:13:24.08:771,24,0	1/1:12,0:18:3.01:108,3,0	1/1:21,0:21:15.05:379,15,0	./.	0/0:16,0:17:36.12:0,36,1269	0/0:16,0:17:26.90:0,27,747	1/1:5,1:8:6.02:343,6,0	1/1:6,2:15:21.04:693,21,0	1/1:11,0:11:9.03:269,9,0	1/1:9,0:7:9.03:256,9,0
chr10	64093997	.	CT	C	15114.51	PASS	AB=0.923;AC=45;AF=0.804;AN=56;BaseQRankSum=6.559;DP=549;FS=16.137;HRun=2;HaplotypeScore=61.6129;InbreedingCoeff=0.9103;MQ=92.62;MQ0=0;MQRankSum=-5.823;QD=33.44;ReadPosRankSum=3.095;VQSLOD=3.2657;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,31:33:90.29:1168,90,0	1/1:1,10:11:27.09:350,27,0	0/0:24,0:24:69.21:0,69,985	0/0:22,0:23:50.61:0,51,747	0/0:16,0:16:48.16:0,48,718	1/1:1,14:15:33.11:428,33,0	1/1:0,28:28:78.25:1012,78,0	1/1:0,25:25:72.23:935,72,0	1/1:1,15:16:45.15:583,45,0	1/1:0,11:11:30.08:375,30,0	1/1:0,12:12:33.11:428,33,0	1/1:1,22:23:54.18:701,54,0	0/0:17,0:17:51.16:0,51,735	1/1:0,16:16:45.15:584,45,0	1/1:0,16:16:42.14:545,42,0	1/1:0,18:18:51.17:662,51,0	1/1:0,33:33:96.31:1245,96,0	1/1:0,14:14:39.13:506,39,0	1/1:0,20:20:60.19:777,60,0	1/1:0,17:17:48.16:623,48,0	1/1:1,44:45:99:1596,123,0	1/1:0,15:15:42.14:545,42,0	0/0:17,0:17:48.15:0,48,699	0/1:22,2:24:5.63:6,0,916	1/1:0,21:21:60.20:779,60,0	1/1:2,14:16:39.11:490,39,0	1/1:0,14:14:42.14:545,42,0	1/1:1,8:9:18.06:234,18,0
chr10	64095646	.	TG	T	16712.17	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=5.753;DP=620;FS=5.683;HRun=3;HaplotypeScore=61.7911;InbreedingCoeff=0.9973;MQ=93.53;MQ0=0;MQRankSum=-7.073;QD=34.25;ReadPosRankSum=4.347;VQSLOD=5.3664;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,40:40:99:1376,111,0	1/1:0,9:9:24.08:298,24,0	0/0:25,0:25:75.25:0,75,1065	0/0:31,0:30:60.61:0,61,1057	1/1:3,29:31:81.25:991,81,0	1/1:0,17:17:51.16:632,51,0	1/1:0,17:17:45.14:558,45,0	1/1:0,24:24:69.22:855,69,0	1/1:0,22:22:60.19:744,60,0	1/1:0,33:33:96.30:1191,96,0	1/1:0,29:29:81.25:1004,81,0	1/1:1,17:18:51.16:630,51,0	0/0:23,0:23:69.23:0,69,993	1/1:0,11:11:27.08:335,27,0	1/1:1,20:21:60.19:743,60,0	1/1:0,19:19:54.17:670,54,0	1/1:1,28:29:81.25:1004,81,0	1/1:0,24:24:66.21:818,66,0	1/1:1,12:13:33.10:409,33,0	1/1:0,20:20:51.16:627,51,0	1/1:0,34:34:90.28:1116,90,0	1/1:0,14:14:42.13:521,42,0	0/0:23,0:23:69.23:0,69,993	0/0:30,0:30:90.29:0,90,1278	1/1:0,13:13:36.11:446,36,0	1/1:0,25:25:75.24:930,75,0	1/1:0,16:16:48.15:593,48,0	1/1:2,6:8:18.06:223,18,0
chr10	64097446	.	CT	C	1482.47	PASS	AB=0.787;AC=32;AF=0.571;AN=56;BaseQRankSum=-5.953;DP=556;FS=3.084;HRun=17;HaplotypeScore=89.7247;InbreedingCoeff=0.2439;MQ=66.95;MQ0=14;MQRankSum=3.000;QD=4.49;ReadPosRankSum=2.731;VQSLOD=1.6407;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:10.99:0,11,53	0/1:6,1:7:13.30:27,0,13	0/0:59,0:20:22.96:0,23,124	0/0:54,0:23:16.08:0,16,142	0/0:27,0:27:54.94:0,55,253	1/1:8,2:10:11.53:65,12,0	0/1:8,6:15:37.94:93,0,38	0/1:22,3:26:15.56:16,0,117	0/0:16,0:16:21.08:0,21,123	1/1:16,7:25:31.55:179,32,0	0/1:8,3:11:12.25:38,0,12	1/1:9,3:12:8.64:50,9,0	0/0:16,0:16:18.32:0,18,132	0/1:10,2:13:1.65:77,0,2	0/1:12,6:19:8.11:109,0,8	1/1:8,4:14:22.32:120,22,0	0/1:14,7:22:34.33:80,0,34	1/1:6,7:14:24:124,24,0	1/1:10,4:16:18.58:94,19,0	1/1:9,3:20:24.63:102,25,0	1/1:5,1:6:0.37:13,0,0	0/1:11,5:19:18.32:87,0,18	0/1:16,2:19:27.27:27,0,84	0/0:21,0:20:26.26:0,26,182	1/1:10,8:19:16.95:128,17,0	0/1:15,3:22:28.71:122,0,29	1/1:7,5:10:17.39:98,17,0	1/1:5,1:5:4.94:23,5,0
chr10	64097453	.	T	TTTTTTG	1497	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=-0.632;DP=596;FS=5.186;HRun=0;HaplotypeScore=148.7187;InbreedingCoeff=0.5786;MQ=56.36;MQ0=34;MQRankSum=-4.217;QD=36.51;ReadPosRankSum=-0.263;VQSLOD=3.2993;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:33:20.71:0,21,148	0/0:6,0:6:15.01:0,15,214	0/0:65,0:16:34.93:0,35,328	0/0:59,0:22:38.36:0,38,447	1/1:20,8:28:65.93:1578,66,0	0/0:12,0:11:15.01:0,15,224	0/0:19,0:18:42.90:0,43,649	0/0:28,0:26:50.65:0,51,694	0/1:13,0:12:24.46:24,0,178	0/0:27,0:26:63.28:0,63,753	0/0:12,0:12:29.87:0,30,330	0/0:12,0:11:23.88:0,24,256	0/0:11,0:11:21.90:0,22,322	0/0:17,0:16:32.98:0,33,475	0/0:20,0:20:41.95:0,42,544	0/0:15,0:14:35.96:0,36,481	0/0:23,0:21:41.99:0,42,628	0/0:19,0:15:35.27:0,35,498	0/0:14,0:14:35.99:0,36,468	0/0:18,0:17:47.23:0,47,622	0/0:5,0:5:6:0,6,75	0/0:21,0:20:44.92:0,45,641	0/0:22,0:22:38.08:0,38,561	0/0:24,0:23:28.60:0,29,448	0/0:17,0:17:48.01:0,48,651	0/0:27,0:26:66.50:0,66,952	0/0:16,0:12:29.96:0,30,392	0/0:11,0:8:14.92:0,15,146
chr10	64097464	.	CCTTTT	C	79.68	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=1.256;DP=571;FS=15.865;HRun=0;HaplotypeScore=109.1264;InbreedingCoeff=0.3276;MQ=48.60;MQ0=50;MQRankSum=1.504;QD=0.46;ReadPosRankSum=-2.258;VQSLOD=0.9480;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:8,23:30:14.92:153,15,0	0/0:4,0:4:11.89:0,12,140	0/1:58,0:12:0.23:0,0,47	0/1:58,0:20:9.07:9,0,154	0/0:29,0:29:62.78:0,63,825	0/0:14,0:10:15.05:0,15,254	0/0:19,0:18:35.71:0,36,477	0/0:26,0:24:45.54:0,46,769	0/0:13,0:11:23.84:0,24,318	0/0:26,0:25:54.05:0,54,747	0/0:14,0:14:29.92:0,30,399	0/0:9,0:7:6.99:0,7,205	0/0:9,0:8:17.80:0,18,312	0/0:18,0:16:18.47:0,18,433	0/0:17,0:17:33.08:0,33,548	0/0:14,0:13:30.03:0,30,437	0/0:22,0:20:25.93:0,26,517	0/0:20,0:15:26.72:0,27,343	0/0:13,0:13:38.97:0,39,529	0/0:20,0:19:32.28:0,32,677	0/0:4,0:4:5.96:0,6,45	0/0:18,0:17:32.14:0,32,407	0/0:20,0:20:15.90:0,16,484	0/1:26,0:22:25.54:26,0,173	0/0:17,0:16:39.01:0,39,523	0/0:24,0:23:56.36:0,56,801	0/0:18,0:13:36.11:0,36,567	0/0:10,0:6:9.50:0,9,133
chr10	64097475	.	CT	C	1456.03	PASS	AB=0.783;AC=39;AF=0.696;AN=56;BaseQRankSum=-0.593;DP=553;FS=0.877;HRun=13;HaplotypeScore=70.0817;InbreedingCoeff=0.3812;MQ=37.48;MQ0=62;MQRankSum=-3.284;QD=3.37;ReadPosRankSum=3.834;VQSLOD=-0.1256;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:31,0:30:3.22:23,3,0	1/1:3,1:4:2.92:22,3,0	0/0:38,0:6:4.56:0,5,30	0/1:44,1:14:15.43:15,0,22	0/1:15,11:26:7.36:55,0,7	1/1:10,9:12:5.92:44,6,0	1/1:10,7:16:8.87:66,9,0	0/0:22,0:20:24.04:0,24,247	1/1:5,10:14:13.91:93,14,0	1/1:12,8:19:20.76:153,21,0	0/1:6,9:15:5.33:129,0,5	1/1:7,4:8:5.93:43,6,0	0/0:10,1:9:11.70:0,12,78	1/1:12,9:18:17.77:127,18,0	1/1:8,9:16:8.80:65,9,0	1/1:9,5:13:11.87:87,12,0	1/1:12,11:20:13.83:93,14,0	1/1:12,8:15:10.92:71,11,0	1/1:11,4:14:8.64:65,9,0	1/1:13,9:21:4.87:60,5,0	0/0:4,1:4:0:0,0,0	1/1:11,4:15:7.66:49,8,0	0/0:20,0:20:12.47:0,12,107	0/0:24,0:20:12.01:0,12,113	1/1:9,8:16:17.77:131,18,0	0/1:17,6:22:66.13:66,0,67	1/1:7,13:15:20.82:153,21,0	0/1:9,2:6:15.87:16,0,24
chr10	64097755	.	TA	T	1423.14	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.029;DP=586;FS=3.946;HRun=2;HaplotypeScore=61.6102;InbreedingCoeff=0.9895;MQ=83.56;MQ0=0;MQRankSum=1.039;QD=32.34;ReadPosRankSum=2.121;VQSLOD=3.6759;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,43:44:99:1518,117,0	0/0:11,0:11:33.09:0,33,473	0/0:26,0:26:75.18:0,75,981	0/0:13,0:13:39.13:0,39,562	0/0:11,0:11:24.08:0,24,353	0/0:17,0:17:45.11:0,45,642	0/0:24,0:24:69.23:0,69,1034	0/0:30,0:30:87.26:0,87,1229	0/0:21,0:21:48.16:0,48,710	0/0:27,0:27:78.26:0,78,1158	0/0:13,0:13:36.12:0,36,539	0/0:18,0:18:51.17:0,51,762	0/0:15,0:15:42.14:0,42,629	0/0:21,0:21:60.15:0,60,852	0/0:28,0:28:66.22:0,66,988	0/0:20,0:20:60.20:0,60,898	0/0:28,0:28:78.22:0,78,1133	0/0:22,0:22:57.19:0,57,854	0/0:19,0:19:51.17:0,51,764	0/0:18,0:18:54.17:0,54,780	0/0:35,0:35:99:0,105,1552	0/0:16,0:16:45.15:0,45,674	0/0:18,0:18:51.15:0,51,726	0/0:15,0:15:42.13:0,42,610	0/0:18,0:18:54.15:0,54,767	0/0:28,0:28:81.27:0,81,1213	0/0:24,0:24:57.16:0,57,829	0/0:6,0:6:18.06:0,18,270
chr10	64099947	.	ATT	A	1459.73	PASS	AB=1.000;AC=4;AF=0.071;AN=56;BaseQRankSum=7.484;DP=482;FS=0.637;HRun=3;HaplotypeScore=66.4067;InbreedingCoeff=0.5468;MQ=57.42;MQ0=2;MQRankSum=3.751;QD=23.93;ReadPosRankSum=0.334;VQSLOD=1.7874;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,30:36:99:1552,105,0	0/0:10,0:10:27.09:0,27,500	0/1:16,0:11:0.55:1,0,302	0/1:8,0:6:9.20:9,0,186	0/0:30,0:30:81.22:0,81,1444	0/0:21,0:21:57.20:0,57,1086	0/0:13,0:13:36.10:0,36,619	0/0:25,0:25:75.26:0,75,1369	0/0:11,0:11:30.10:0,30,559	0/0:22,0:22:63.20:0,63,1154	0/0:15,0:15:42.14:0,42,768	0/0:9,0:9:27.09:0,27,489	0/0:15,0:15:45.12:0,45,804	0/0:9,0:9:27.09:0,27,503	0/0:11,0:11:33.11:0,33,604	0/0:5,0:5:15.05:0,15,287	0/0:44,0:44:99:0,126,2391	0/0:26,0:26:75.26:0,75,1418	0/0:19,0:17:51.16:0,51,901	0/0:17,0:17:48.16:0,48,904	0/0:6,0:6:18.06:0,18,317	0/0:12,0:11:33.11:0,33,624	0/0:15,0:15:45.15:0,45,847	0/0:19,0:19:54.11:0,54,932	0/0:19,0:19:54.18:0,54,1019	0/0:18,0:18:54.19:0,54,1033	0/0:18,0:18:42.14:0,42,803	0/0:12,0:12:36.12:0,36,689
chr10	64100708	.	T	TC	7073.23	PASS	AB=0.979;AC=51;AF=0.911;AN=56;BaseQRankSum=3.175;DP=483;FS=6.328;HRun=1;HaplotypeScore=107.6551;InbreedingCoeff=-0.0967;MQ=79.19;MQ0=0;MQRankSum=-4.114;QD=14.64;ReadPosRankSum=7.625;VQSLOD=4.1959;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:35,0:35:76.26:496,76,0	0/1:8,0:8:19.99:103,0,20	0/1:15,1:15:73.11:154,0,73	0/1:19,1:20:22.56:218,0,23	1/1:11,0:11:7.14:149,7,0	1/1:12,0:12:26.58:186,27,0	1/1:33,0:33:56.41:491,56,0	0/1:24,0:24:0.65:209,0,1	1/1:21,0:21:56.16:392,56,0	1/1:16,0:16:4.73:139,5,0	1/1:7,0:7:14.73:104,15,0	1/1:22,0:22:31.24:339,31,0	1/1:8,0:8:20.56:135,21,0	1/1:23,0:23:36.95:368,37,0	1/1:17,0:17:50.03:340,50,0	1/1:17,0:17:23.39:283,23,0	1/1:25,0:25:16.49:349,16,0	1/1:18,0:18:21.30:239,21,0	1/1:14,1:15:37.79:249,38,0	1/1:6,0:6:5.89:38,6,0	1/1:33,0:35:68.84:457,69,0	1/1:9,0:9:23.46:158,23,0	0/1:8,0:8:3.91:134,0,4	1/1:11,0:11:24.19:138,24,0	1/1:14,0:14:35.23:260,35,0	1/1:22,0:22:48.91:304,49,0	1/1:14,1:15:44.61:344,45,0	1/1:15,0:15:44.40:298,44,0
chr10	64103246	.	ACTTGT	A	7386.53	PASS	AB=0.984;AC=22;AF=0.393;AN=56;BaseQRankSum=-11.572;DP=713;FS=0.000;HRun=0;HaplotypeScore=168.8170;InbreedingCoeff=-0.5128;MQ=68.87;MQ0=7;MQRankSum=-0.036;QD=13.83;ReadPosRankSum=-3.228;VQSLOD=3.6086;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:46,0:45:99:759,0,438	0/1:10,0:10:14.88:15,0,196	0/0:34,0:17:45.15:0,45,813	0/0:32,0:22:56.83:0,57,792	0/0:12,0:12:3.01:0,3,49	0/1:15,2:17:99:199,0,302	0/1:18,0:18:99:192,0,165	1/1:0,29:29:84.27:1149,84,0	0/1:33,0:33:99:497,0,339	0/1:28,1:29:99:443,0,389	0/1:11,0:11:95.30:95,0,107	0/1:25,0:25:99:362,0,285	0/0:18,0:18:54.18:0,54,1424	0/1:18,0:18:99:100,0,386	0/0:26,0:26:36.12:0,36,586	0/1:29,0:29:99:308,0,461	0/1:43,1:44:99:529,0,618	0/1:33,0:33:99:383,0,426	0/1:24,1:25:99:573,0,212	0/1:14,0:14:99:156,0,214	0/1:41,0:41:99:455,0,565	0/1:21,1:22:99:287,0,317	0/0:19,0:19:51.17:0,51,1113	0/0:37,0:37:99:0,108,2668	0/1:19,0:19:99:154,0,198	0/1:34,0:34:99:492,0,453	0/1:25,0:25:99:207,0,410	0/1:11,1:12:32.03:32,0,286
chr10	64103247	.	CT	C	18892.25	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=8.518;DP=714;FS=2.802;HRun=2;HaplotypeScore=79.4524;InbreedingCoeff=0.9565;MQ=68.23;MQ0=7;MQRankSum=-1.069;QD=33.20;ReadPosRankSum=4.047;VQSLOD=4.9681;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,46:46:99:1714,132,0	1/1:0,9:9:24.08:311,24,0	0/0:34,0:16:45.15:0,45,670	0/0:33,0:23:58.19:0,58,747	1/1:12,0:12:0.81:3,1,0	1/1:2,15:17:48.02:582,48,0	1/1:2,15:17:42.14:545,42,0	1/1:29,0:29:83.01:1032,83,0	1/1:1,32:33:87.28:1130,87,0	1/1:1,28:29:87.21:1104,87,0	1/1:0,11:11:24.08:312,24,0	1/1:0,25:25:65.92:856,66,0	0/0:19,0:19:57.18:0,57,832	1/1:0,18:18:54.18:699,54,0	1/1:28,0:28:18.35:43,18,0	1/1:0,29:29:81.26:1052,81,0	1/1:2,41:43:99:1537,120,0	1/1:1,31:32:84.27:1091,84,0	1/1:1,24:25:75.18:952,75,0	1/1:0,14:14:39.13:506,39,0	1/1:0,41:41:99:1480,114,0	1/1:1,21:22:63.20:818,63,0	0/0:20,0:20:54.17:0,54,787	0/0:38,0:38:99:0,114,1615	1/1:0,18:18:42.14:545,42,0	1/1:1,33:34:99:1315,102,0	1/1:0,25:25:66.21:857,66,0	1/1:1,11:12:33.04:408,33,0
chr10	64103248	.	T	TGTC	8857.13	PASS	AB=1.000;AC=26;AF=0.464;AN=56;BaseQRankSum=-11.091;DP=725;FS=1.681;HRun=0;HaplotypeScore=145.8970;InbreedingCoeff=-0.2783;MQ=66.58;MQ0=7;MQRankSum=1.525;QD=15.59;ReadPosRankSum=-2.060;VQSLOD=4.3097;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:48,0:47:8.87:972,9,0	0/1:9,0:9:20.42:20,0,33	0/0:33,0:15:45.15:0,45,692	0/0:34,0:22:56.07:0,56,737	1/1:4,0:20:2.69:55,3,0	0/1:17,0:17:62.40:78,0,62	0/1:15,0:15:7.11:274,0,7	1/1:29,0:29:79.03:1011,79,0	0/1:32,0:32:19.59:546,0,20	0/1:29,0:29:29.99:481,0,30	0/1:11,0:11:7.24:135,0,7	0/1:25,0:25:24.56:370,0,25	0/0:20,0:20:57.18:0,57,963	0/1:18,0:18:56.27:112,0,56	1/1:1,28:29:36.12:887,36,0	0/1:29,0:29:58.52:322,0,59	0/1:43,0:43:70.61:559,0,71	0/1:32,0:32:47.37:396,0,47	0/1:26,0:26:7.94:516,0,8	0/1:14,0:14:26.63:162,0,27	0/1:43,0:43:64.24:562,0,64	0/1:22,0:22:31.97:297,0,32	0/0:20,0:20:54.17:0,54,864	0/0:38,0:38:99:0,114,1834	0/1:18,0:18:7.20:274,0,7	0/1:34,0:34:42.63:570,0,43	0/1:25,0:25:48.93:256,0,49	0/0:12,0:12:24.80:0,25,84
chr10	64104749	.	AAC	A	1499.84	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.273;DP=752;FS=16.160;HRun=0;HaplotypeScore=88.5360;InbreedingCoeff=0.9984;MQ=76.04;MQ0=0;MQRankSum=0.019;QD=40.54;ReadPosRankSum=-3.118;VQSLOD=3.3128;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,150,2758	0/0:10,0:10:30.09:0,30,527	0/0:18,0:18:50.81:0,51,751	0/0:21,0:20:52.69:0,53,872	0/0:15,0:15:42.14:0,42,754	0/0:17,0:17:48.12:0,48,828	0/0:33,0:33:93.30:0,93,1691	1/1:0,37:37:99:1595,111,0	0/0:22,0:22:66.19:0,66,1165	0/0:21,0:21:63.21:0,63,1134	0/0:9,0:9:27.08:0,27,460	0/0:29,0:29:87.25:0,87,1523	0/0:30,0:30:90.29:0,90,1642	0/0:34,0:34:99:0,102,1857	0/0:31,0:31:93.28:0,93,1648	0/0:32,0:32:93.28:0,93,1662	0/0:48,0:48:99:0,141,2532	0/0:31,0:31:93.23:0,93,1616	0/0:16,0:16:48.14:0,48,835	0/0:21,0:21:63.18:0,63,1094	0/0:61,0:61:99:0,178,3183	0/0:19,0:19:57.18:0,57,1018	0/0:15,0:15:42.14:0,42,767	0/0:37,0:37:99:0,108,1979	0/0:23,0:23:66.20:0,66,1142	0/0:27,0:27:81.25:0,81,1414	0/0:21,0:21:63.22:0,63,1165	0/0:21,0:21:60.16:0,60,1022
chr10	64106138	.	AAAGAAG	A	6207.37	PASS	AB=0.956;AC=44;AF=0.786;AN=56;BaseQRankSum=8.944;DP=463;FS=19.379;HRun=0;HaplotypeScore=112.8821;InbreedingCoeff=0.7006;MQ=51.54;MQ0=13;MQRankSum=-3.399;QD=15.84;ReadPosRankSum=0.179;VQSLOD=2.8903;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:30:39.09:419,39,0	1/1:5,0:5:6.02:63,6,0	0/0:15,0:6:9.48:0,9,215	0/0:6,0:5:15.05:0,15,351	1/1:24,0:23:42.08:532,42,0	1/1:16,1:16:17.88:208,18,0	0/1:18,1:19:60.37:165,0,60	1/1:28,0:29:37.89:526,38,0	1/1:10,0:10:9.02:95,9,0	1/1:14,0:14:26.98:269,27,0	1/1:16,0:16:32.95:320,33,0	1/1:12,1:13:26.25:299,26,0	0/0:11,0:11:33.11:0,33,1045	1/1:13,1:14:29.95:339,30,0	1/1:18,0:18:24.06:261,24,0	1/1:18,0:18:17.54:189,18,0	1/1:21,0:19:27.04:274,27,0	0/1:24,1:21:46.48:185,0,46	1/1:17,0:17:29.64:372,30,0	1/1:11,0:10:8.59:95,9,0	1/1:8,0:7:8.95:77,9,0	1/1:18,2:17:30.92:351,31,0	0/0:16,0:16:39.12:0,39,1142	0/0:23,0:22:54.19:0,54,1744	1/1:13,1:14:21:216,21,0	1/1:17,0:17:29.97:355,30,0	1/1:28,0:27:51.12:537,51,0	1/1:3,0:3:6:63,6,0
chr10	64106139	.	AAGAAG	A	10887.43	PASS	AB=0.546;AC=43;AF=0.768;AN=56;BaseQRankSum=7.027;DP=459;FS=17.440;HRun=0;HaplotypeScore=88.4981;InbreedingCoeff=0.6756;MQ=51.63;MQ0=13;MQRankSum=-4.755;QD=28.13;ReadPosRankSum=0.184;VQSLOD=3.3045;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,26:29:43.50:815,43,0	1/1:0,5:5:6.02:124,6,0	0/0:15,0:6:11.05:0,11,204	0/0:6,0:5:15.05:0,15,332	1/1:23,0:22:41.32:484,41,0	1/1:5,12:16:17.94:321,18,0	0/1:3,16:19:44.25:360,0,44	1/1:6,0:29:65.45:771,65,0	1/1:1,8:9:12.04:216,12,0	1/1:2,12:14:33.10:552,33,0	1/1:3,13:16:36.07:597,36,0	1/1:6,6:13:33.10:532,33,0	0/0:11,0:11:33.11:0,33,939	1/1:2,12:14:30.10:566,30,0	1/1:1,17:18:24.08:474,24,0	0/1:1,17:18:2.63:351,0,3	1/1:3,18:19:30.10:567,30,0	0/1:7,18:22:54.80:406,0,55	1/1:3,14:17:19:641,19,0	1/1:3,8:10:12.04:175,12,0	1/1:6,1:7:17.89:194,18,0	1/1:6,13:17:36.03:562,36,0	0/0:16,0:16:42.11:0,42,1071	0/0:24,0:23:63.15:0,63,1669	1/1:3,11:14:24.08:413,24,0	1/1:1,14:15:32.96:518,33,0	1/1:1,27:27:57.17:1114,57,0	1/1:1,2:3:8.62:134,9,0
chr10	64106140	.	AGAAGAAG	A	3750.48	PASS	AB=0.992;AC=41;AF=0.732;AN=56;BaseQRankSum=9.641;DP=439;FS=16.872;HRun=0;HaplotypeScore=122.6572;InbreedingCoeff=0.4377;MQ=52.24;MQ0=13;MQRankSum=-4.112;QD=10.25;ReadPosRankSum=1.594;VQSLOD=1.4435;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:27:38.17:174,38,0	1/1:5,0:5:5.60:27,6,0	0/0:15,0:6:3.01:0,3,293	0/0:6,0:5:15.05:0,15,445	1/1:5,15:21:46.79:765,47,0	1/1:14,0:14:15.58:82,16,0	0/1:18,0:18:51.80:52,0,76	1/1:27,0:27:67.85:923,68,0	1/1:8,0:8:10.81:49,11,0	1/1:12,0:13:20.91:111,21,0	1/1:13,0:14:21.59:108,22,0	1/1:13,0:13:10.81:96,11,0	0/0:12,0:12:36.12:0,36,1328	1/1:13,0:13:15.77:117,16,0	1/1:17,0:17:22.29:103,22,0	0/1:18,0:18:9.27:61,0,9	1/1:20,0:18:21.15:109,21,0	0/1:23,0:20:67.83:68,0,91	0/1:17,0:17:38.33:139,0,38	0/1:10,0:9:13.10:23,0,13	1/1:8,0:7:10.41:57,10,0	1/1:16,0:16:0.75:141,1,0	0/0:16,0:16:42.04:0,42,1441	0/0:24,0:23:63.17:0,63,2218	1/1:12,0:13:19.73:84,20,0	1/1:14,0:14:24.27:146,24,0	1/1:27,0:26:52.58:250,53,0	1/1:2,0:3:8.61:65,9,0
chr10	64106631	.	AT	A	1067.98	PASS	AB=1.000;AC=6;AF=0.107;AN=56;BaseQRankSum=-0.805;DP=348;FS=1.241;HRun=1;HaplotypeScore=66.3270;InbreedingCoeff=0.5003;MQ=57.09;MQ0=22;MQRankSum=-1.166;QD=16.95;ReadPosRankSum=-2.440;VQSLOD=3.1096;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:24,1:23:50.32:363,50,0	0/0:5,0:5:10.67:0,11,64	0/0:43,0:14:18.02:0,18,199	0/0:39,0:11:12.90:0,13,95	0/1:11,0:10:27:27,0,35	0/0:11,0:11:22.37:0,22,148	0/0:2,0:2:5.95:0,6,41	1/1:1,23:23:66.09:790,66,0	0/1:3,0:3:4.61:22,0,5	0/0:13,0:13:7.77:0,8,150	0/0:7,0:7:14.85:0,15,101	0/0:7,0:6:15.38:0,15,88	0/0:6,0:6:18.06:0,18,226	0/0:6,0:6:15.18:0,15,84	0/0:13,0:12:22.47:0,22,141	0/0:4,0:4:6.81:0,7,41	0/0:28,0:28:49.15:0,49,308	0/0:11,0:11:19.96:0,20,124	0/0:18,0:17:39.23:0,39,230	0/0:8,0:7:17.39:0,17,105	0/0:5,0:5:13.89:0,14,76	0/0:1,0:1:2.37:0,2,8	0/0:8,0:8:23.34:0,23,212	0/0:4,0:4:9.01:0,9,99	0/0:16,0:16:26.21:0,26,187	0/0:14,0:14:19.55:0,20,161	0/0:9,0:9:1.92:0,2,83	0/0:7,0:4:11.86:0,12,79
chr10	64106632	.	TA	T	615.17	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=3.886;DP=356;FS=6.380;HRun=10;HaplotypeScore=69.4644;InbreedingCoeff=0.7278;MQ=57.34;MQ0=22;MQRankSum=-2.468;QD=9.61;ReadPosRankSum=-0.641;VQSLOD=2.2959;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:23:46.37:372,46,0	0/0:5,0:5:12.78:0,13,47	0/0:42,0:14:1.66:0,2,171	0/0:39,0:11:18.89:0,19,225	1/1:9,4:12:16.79:142,17,0	0/0:11,0:11:20.55:0,21,78	0/0:2,0:2:5.19:0,5,20	1/1:26,0:25:18.26:238,18,0	0/0:3,0:3:7.69:0,8,29	0/0:13,0:13:30.88:0,31,122	0/0:8,0:8:15.91:0,16,67	0/0:7,0:6:15.56:0,16,60	0/0:7,0:7:21.06:0,21,276	0/0:6,0:6:9.51:0,10,33	0/0:12,0:12:23.17:0,23,87	0/0:4,0:4:7.69:0,8,29	0/0:28,0:28:58.24:0,58,220	0/0:12,0:12:18.26:0,18,71	0/0:19,0:18:32.62:0,33,129	0/0:8,0:7:12.98:0,13,51	0/0:5,0:5:10.39:0,10,41	0/0:1,0:1:1.82:0,2,5	0/0:8,0:8:18.06:0,18,239	0/0:4,0:4:9.03:0,9,123	0/0:18,0:18:28.46:0,28,109	0/0:14,0:14:35.44:0,35,133	0/0:8,0:8:16.69:0,17,60	0/0:7,0:4:10.39:0,10,40
chr10	64106633	.	A	AAT	2405.10	PASS	AB=1.000;AC=44;AF=0.786;AN=56;BaseQRankSum=-0.030;DP=355;FS=7.763;HRun=0;HaplotypeScore=69.4828;InbreedingCoeff=0.6896;MQ=57.48;MQ0=22;MQRankSum=2.675;QD=9.51;ReadPosRankSum=3.610;VQSLOD=2.5045;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:7,16:23:13.72:668,14,0	1/1:5,0:5:13.39:54,13,0	0/0:43,0:14:4.65:0,5,267	0/0:39,0:11:27.71:0,28,273	1/1:7,0:12:26.29:196,26,0	1/1:11,0:11:21.65:91,22,0	1/1:2,0:2:5.36:21,5,0	0/1:26,0:25:8.80:98,0,9	1/1:3,0:3:7.85:31,8,0	1/1:14,0:14:18.65:111,19,0	0/1:8,0:8:0.45:37,0,0	1/1:7,0:6:15.89:63,16,0	0/0:8,0:8:21.06:0,21,300	1/1:6,0:6:16.68:81,17,0	1/1:11,0:11:24.11:96,24,0	1/1:4,0:4:8.04:32,8,0	1/1:27,0:27:61.79:260,62,0	1/1:12,0:12:18.57:73,19,0	1/1:18,0:17:38.88:155,39,0	1/1:7,0:6:13.13:52,13,0	1/1:5,0:5:13.43:56,13,0	1/1:1,0:1:2.74:12,3,0	0/0:8,0:8:21.04:0,21,296	0/0:4,0:4:9.03:0,9,135	1/1:18,0:18:29.46:118,29,0	1/1:14,0:14:37.53:152,38,0	1/1:9,0:9:18.40:76,18,0	1/1:7,0:4:10.71:43,11,0
chr10	64106634	.	A	AT	7290.25	PASS	AB=1.000;AC=41;AF=0.732;AN=56;BaseQRankSum=-9.732;DP=356;FS=3.113;HRun=0;HaplotypeScore=46.7126;InbreedingCoeff=0.8117;MQ=57.97;MQ0=22;MQRankSum=3.057;QD=33.75;ReadPosRankSum=4.105;VQSLOD=4.4505;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:23:23.60:108,0,24	1/1:0,5:5:15.05:240,15,0	0/0:43,0:14:23.56:0,24,313	0/0:39,0:11:24.61:0,25,205	0/0:13,0:12:25.87:0,26,122	1/1:0,11:11:24.08:382,24,0	1/1:0,3:3:6.02:96,6,0	0/0:26,0:25:64.96:0,65,468	1/1:1,3:4:9.03:142,9,0	1/1:0,15:15:42.06:582,42,0	1/1:0,7:7:17.98:256,18,0	1/1:1,6:6:18.06:285,18,0	0/0:8,0:8:24.05:0,24,302	1/1:0,5:5:12.04:190,12,0	1/1:0,12:12:27.09:431,27,0	1/1:0,4:4:9.03:144,9,0	1/1:0,27:27:69.24:1094,69,0	1/1:2,10:12:24.08:371,24,0	1/1:1,18:18:48.14:731,48,0	1/1:0,7:6:15.05:237,15,0	1/1:0,5:5:15.05:236,15,0	1/1:0,1:1:3.01:46,3,0	0/0:7,0:7:21.04:0,21,273	0/0:4,0:4:9.03:0,9,124	1/1:0,18:18:33.11:527,33,0	1/1:0,14:14:42.14:669,42,0	1/1:0,8:8:21.07:331,21,0	1/1:3,4:4:12.04:192,12,0
chr10	64106681	.	AAC	A	1223.45	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=3.462;DP=398;FS=0.774;HRun=0;HaplotypeScore=66.0899;InbreedingCoeff=0.9551;MQ=77.88;MQ0=0;MQRankSum=-0.332;QD=38.23;ReadPosRankSum=-2.512;VQSLOD=4.2287;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:57.18:0,57,1064	0/0:9,0:9:27.09:0,27,514	0/0:4,0:5:14.75:0,15,197	0/0:12,0:12:36.06:0,36,566	1/1:0,12:12:36.05:500,36,0	0/0:16,0:16:45.12:0,45,792	0/0:11,0:11:30.10:0,30,579	1/1:1,19:20:57.16:845,57,0	0/0:11,0:11:33.11:0,33,627	0/0:23,0:23:69.23:0,69,1300	0/0:14,0:14:42.14:0,42,797	0/0:18,0:18:51.16:0,51,949	0/0:14,0:14:42.14:0,42,811	0/0:9,0:9:21.07:0,21,405	0/0:16,0:16:45.14:0,45,815	0/0:12,0:12:33.11:0,33,635	0/0:26,0:26:66.18:0,66,1193	0/0:20,0:20:48.16:0,48,894	0/0:20,0:20:60.19:0,60,1121	0/0:13,0:13:39.13:0,39,752	0/0:8,0:8:21.07:0,21,404	0/0:8,0:8:24.07:0,24,429	0/0:10,0:10:30.10:0,30,579	0/0:3,0:3:9.01:0,9,139	0/0:19,0:19:36.12:0,36,687	0/0:17,0:17:51.17:0,51,983	0/0:19,0:19:54.17:0,54,1009	0/0:8,0:8:24.08:0,24,463
chr10	64106852	.	C	CA	9977.43	PASS	AB=0.570;AC=42;AF=0.750;AN=56;BaseQRankSum=-10.174;DP=549;FS=0.851;HRun=10;HaplotypeScore=48.9873;InbreedingCoeff=0.7531;MQ=71.14;MQ0=0;MQRankSum=-0.073;QD=23.15;ReadPosRankSum=0.277;VQSLOD=5.4531;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:74.87:0,75,611	1/1:0,3:3:6.02:64,6,0	1/1:6,0:6:2.99:23,3,0	0/0:12,0:12:10.83:0,11,105	1/1:5,25:30:13.84:547,14,0	1/1:5,16:23:50.79:508,51,0	1/1:2,19:21:48.12:512,48,0	1/1:2,22:24:60.13:629,60,0	0/0:21,0:21:59.93:0,60,493	1/1:4,20:24:63.13:658,63,0	1/1:2,15:17:42.11:447,42,0	1/1:2,21:24:60.02:622,60,0	0/0:15,0:16:40.99:0,41,326	1/1:3,18:21:33.08:352,33,0	1/1:3,27:30:81.20:864,81,0	0/1:5,13:18:16.21:255,0,16	1/1:8,28:36:24.41:627,24,0	1/1:2,17:19:48.12:512,48,0	1/1:2,12:14:36.09:384,36,0	1/1:2,10:13:27.37:271,27,0	0/1:3,11:14:13.20:284,0,13	1/1:4,7:11:18.05:192,18,0	0/0:14,0:14:38.95:0,39,320	0/0:27,0:27:58.43:0,58,490	1/1:1,12:13:17.63:334,18,0	1/1:2,21:23:63.16:671,63,0	1/1:2,28:29:81.20:863,81,0	1/1:4,13:17:14.45:358,14,0
chr10	64110672	.	TAA	T	1300.59	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=3.168;DP=389;FS=1.277;HRun=12;HaplotypeScore=51.8268;InbreedingCoeff=0.7192;MQ=55.43;MQ0=8;MQRankSum=0.884;QD=20.01;ReadPosRankSum=-0.354;VQSLOD=2.4434;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,34:36:75.13:761,75,0	0/0:5,0:4:12.04:0,12,177	0/0:9,0:6:8.98:0,9,82	0/0:5,0:1:2.60:0,3,10	0/0:2,1:17:0.25:0,0,66	0/0:20,0:20:48.13:0,48,691	0/0:11,0:11:30.06:0,30,419	1/1:4,23:24:66.08:660,66,0	0/0:14,0:14:30.10:0,30,447	0/0:11,0:11:24.08:0,24,357	0/0:11,0:12:29.84:0,30,367	0/0:15,0:15:42.09:0,42,575	0/0:5,0:5:9.03:0,9,134	0/0:9,0:10:26.53:0,27,341	0/0:11,0:11:33.10:0,33,474	0/0:9,0:9:27.06:0,27,376	0/0:20,0:19:54.14:0,54,779	0/0:18,0:17:45.11:0,45,645	0/0:19,0:19:51.16:0,51,728	0/0:20,0:19:57.09:0,57,769	0/0:4,0:4:12.04:0,12,178	0/0:3,0:4:8.52:0,9,98	0/0:5,0:5:12.04:0,12,179	0/0:7,0:7:15.05:0,15,223	0/0:18,0:17:45.10:0,45,612	0/0:17,0:17:41.62:0,42,572	0/0:24,0:24:63.18:0,63,893	0/0:7,0:8:21.06:0,21,297
chr10	64111234	.	T	TACAC	15407.90	PASS	AB=0.571;AC=39;AF=0.696;AN=56;BaseQRankSum=7.878;DP=539;FS=3.191;HRun=0;HaplotypeScore=110.2619;InbreedingCoeff=0.7363;MQ=70.77;MQ0=1;MQRankSum=-5.187;QD=41.64;ReadPosRankSum=3.354;VQSLOD=5.4029;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:40.69:0,41,962	1/1:3,9:13:35.86:800,36,0	0/0:24,0:22:36.08:0,36,555	0/0:27,0:25:51.11:0,51,766	0/0:28,0:28:78.27:0,78,1305	1/1:5,19:25:45.15:1118,45,0	1/1:11,6:17:18.06:446,18,0	1/1:18,1:22:27.09:505,27,0	0/1:6,7:15:12.68:507,0,13	1/1:7,14:24:48.15:1100,48,0	1/1:2,4:7:12.04:298,12,0	0/1:1,12:15:11.12:725,0,11	0/0:18,0:18:48.12:0,48,765	1/1:4,13:17:42.14:1039,42,0	1/1:8,12:21:38.87:907,39,0	1/1:4,16:21:42.14:1044,42,0	1/1:10,22:33:54.19:1343,54,0	1/1:2,8:10:15.05:373,15,0	1/1:8,3:13:14.77:234,15,0	1/1:5,11:16:30.10:746,30,0	1/1:6,17:25:45.63:1090,46,0	1/1:7,3:12:9.03:224,9,0	0/0:14,0:15:39.11:0,39,609	0/0:28,0:28:66.23:0,66,1103	1/1:5,10:15:21.07:522,21,0	1/1:5,15:21:47.95:1132,48,0	1/1:8,12:20:39.13:969,39,0	0/1:2,4:8:35.59:284,0,36
chr10	64111473	.	TAA	T	5982.93	PASS	AB=1.000;AC=45;AF=0.804;AN=56;BaseQRankSum=0.559;DP=266;FS=8.251;HRun=8;HaplotypeScore=37.2710;InbreedingCoeff=0.6790;MQ=53.17;MQ0=11;MQRankSum=0.456;QD=25.68;ReadPosRankSum=3.066;VQSLOD=3.0259;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:23:61.44:381,61,0	1/1:1,3:4:9.03:109,9,0	0/0:9,0:4:7.44:0,7,115	0/1:5,0:4:13.96:14,0,96	0/0:12,0:12:36.07:0,36,527	1/1:0,17:17:48.15:583,48,0	1/1:2,7:7:15.05:183,15,0	1/1:7,20:20:54.13:641,54,0	1/1:2,0:2:5.81:33,6,0	1/1:1,9:10:27.06:314,27,0	1/1:1,5:6:9.02:106,9,0	1/1:1,0:1:3.01:37,3,0	0/0:6,0:6:18.06:0,18,286	1/1:1,4:4:12.04:146,12,0	1/1:0,5:5:15.05:183,15,0	1/1:0,3:3:9.03:110,9,0	1/1:2,32:33:90.28:1097,90,0	1/1:0,11:11:27.08:329,27,0	1/1:5,7:11:20.36:255,20,0	1/1:1,7:8:15.05:183,15,0	1/1:0,7:5:12.04:146,12,0	1/1:2,0:2:2.92:17,3,0	0/0:3,0:3:6.02:0,6,88	0/0:3,0:2:6.02:0,6,101	1/1:2,10:11:27.08:323,27,0	1/1:1,10:10:30.08:355,30,0	1/1:2,12:13:24.07:293,24,0	1/1:0,5:5:12.04:146,12,0
chr10	64111480	.	AAT	A	2440.35	PASS	AB=1.000;AC=32;AF=0.571;AN=56;BaseQRankSum=7.990;DP=285;FS=1.113;HRun=0;HaplotypeScore=50.0349;InbreedingCoeff=0.1402;MQ=54.63;MQ0=4;MQRankSum=-0.167;QD=10.21;ReadPosRankSum=9.045;VQSLOD=2.5720;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,20:22:63.21:911,63,0	1/1:3,0:3:8.84:54,9,0	0/0:10,0:4:8.30:0,8,140	0/0:6,0:4:11.05:0,11,135	0/0:14,0:14:42.02:0,42,611	1/1:18,0:18:25.45:177,25,0	0/1:11,0:10:42.08:42,0,46	0/1:30,0:26:99:148,0,130	1/1:0,4:4:6.02:87,6,0	1/1:10,0:10:3.83:88,4,0	0/1:6,0:6:20.24:35,0,20	1/1:1,0:1:2.97:20,3,0	0/0:8,0:8:24.06:0,24,375	1/1:4,0:4:11.24:54,11,0	0/1:6,0:6:7.97:48,0,8	0/1:4,0:4:13.66:24,0,14	0/1:38,0:38:47.76:313,0,48	1/1:11,0:11:25.82:137,26,0	0/1:12,0:11:25.26:45,0,25	0/1:8,0:8:5.50:60,0,6	0/1:8,0:6:9.46:43,0,9	0/0:1,0:1:0:0,0,0	0/0:3,0:3:8.94:0,9,81	0/0:4,0:4:12.02:0,12,168	1/1:11,0:10:9.73:114,10,0	0/1:12,0:12:15.55:63,0,16	1/1:13,0:12:1.65:85,2,0	1/1:6,0:6:11.61:67,12,0
chr10	64111566	.	GA	G	897.75	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=-2.394;DP=380;FS=1.531;HRun=7;HaplotypeScore=55.2933;InbreedingCoeff=0.5286;MQ=54.83;MQ0=12;MQRankSum=2.516;QD=20.88;ReadPosRankSum=-0.463;VQSLOD=2.9054;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,37:36:96.22:979,96,0	0/0:5,0:5:12.04:0,12,151	0/0:7,0:4:8.69:0,9,74	0/1:6,0:4:14.72:24,0,15	0/0:21,0:19:42.12:0,42,515	0/0:15,0:15:39.08:0,39,473	0/0:15,0:15:33.11:0,33,415	0/0:15,0:10:30.10:0,30,377	0/0:7,0:7:15.05:0,15,186	0/0:14,0:13:30.07:0,30,349	0/0:5,0:5:9.03:0,9,106	0/0:8,0:8:21.06:0,21,257	0/0:13,0:13:33.11:0,33,413	0/0:9,0:9:27.09:0,27,339	0/0:14,0:13:36.11:0,36,444	0/0:9,0:9:24.08:0,24,302	0/0:35,0:35:93.30:0,93,1168	0/0:14,0:13:27.09:0,27,340	0/0:17,0:15:45.10:0,45,538	0/0:5,0:5:12.04:0,12,151	0/0:13,0:13:39.12:0,39,490	0/0:6,0:5:12.04:0,12,151	0/0:9,0:9:24.08:0,24,299	0/0:22,0:22:60.19:0,60,753	0/0:15,0:15:36.11:0,36,450	0/0:19,0:18:36.12:0,36,453	0/0:22,0:22:45.14:0,45,565	0/0:3,0:3:6.02:0,6,75
chr10	64111772	.	A	AT	5485.27	PASS	AC=42;AF=0.778;AN=54;BaseQRankSum=-0.576;DP=248;FS=12.801;HRun=7;HaplotypeScore=33.2829;InbreedingCoeff=0.8313;MQ=52.70;MQ0=0;MQRankSum=-0.713;QD=27.70;ReadPosRankSum=2.041;VQSLOD=4.1284;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,17:21:45.14:542,45,0	1/1:1,3:4:6.02:72,6,0	0/0:4,0:4:5.96:0,6,44	0/0:7,0:7:8.92:0,9,73	0/0:10,0:10:20.97:0,21,191	1/1:1,8:9:24.07:290,24,0	1/1:0,3:3:6.02:72,6,0	1/1:9,21:30:63.16:727,63,0	1/1:0,5:5:15.05:181,15,0	1/1:0,6:6:15.05:181,15,0	1/1:1,3:4:9.03:107,9,0	1/1:0,6:6:18.05:216,18,0	0/0:15,0:15:39.01:0,39,365	1/1:0,9:9:21.06:253,21,0	1/1:0,12:12:30.09:360,30,0	1/1:3,5:8:15.05:181,15,0	1/1:3,9:12:11.93:242,12,0	1/1:1,8:9:18.06:217,18,0	1/1:3,17:20:51.11:588,51,0	1/1:0,3:3:9.03:109,9,0	./.	1/1:0,3:3:9.03:109,9,0	0/0:4,0:4:9.01:0,9,87	0/0:7,0:7:8.85:0,9,62	1/1:0,3:3:9.03:109,9,0	1/1:3,11:14:33.09:387,33,0	1/1:1,11:12:30.09:362,30,0	1/1:0,5:5:15.05:181,15,0
chr10	64113073	.	G	GGT	3115.27	PASS	AB=0.838;AC=35;AF=0.648;AN=54;BaseQRankSum=4.500;DP=280;FS=110.640;HRun=0;HaplotypeScore=57.7657;InbreedingCoeff=0.3572;MQ=42.44;MQ0=18;MQRankSum=-5.555;QD=19.97;ReadPosRankSum=0.650;VQSLOD=0.4145;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,0:12:11.82:344,12,0	1/1:3,1:4:6.02:85,6,0	0/0:42,0:5:14.60:0,15,126	0/0:37,0:5:11.71:0,12,65	0/0:11,0:9:17.40:0,17,168	1/1:5,1:6:9.03:131,9,0	1/1:5,3:7:18.04:226,18,0	1/1:7,0:7:7.26:111,7,0	1/1:11,0:10:23.53:168,24,0	1/1:9,1:8:17.82:224,18,0	1/1:6,2:7:21.04:229,21,0	./.	0/0:14,0:14:39.13:0,39,631	0/1:3,3:5:33.62:172,0,34	0/1:5,0:4:24.60:25,0,42	1/1:2,1:3:9.03:123,9,0	0/1:8,1:6:4.91:184,0,5	0/1:6,1:5:3.28:3,0,89	0/1:6,1:5:45.96:46,0,128	0/1:9,4:13:18.72:335,0,19	1/1:2,0:2:3.01:55,3,0	1/1:1,2:3:6.02:104,6,0	0/0:11,0:11:27.09:0,27,438	0/0:8,0:7:14.94:0,15,239	0/1:8,2:10:99:159,0,122	1/1:13,1:13:30.02:366,30,0	1/1:3,2:5:12.03:156,12,0	1/1:1,0:1:3.01:53,3,0
chr10	64114688	.	AAG	A	870.55	PASS	AB=0.991;AC=21;AF=0.375;AN=56;BaseQRankSum=7.099;DP=508;FS=19.431;HRun=0;HaplotypeScore=89.4045;InbreedingCoeff=-0.0658;MQ=68.51;MQ0=22;MQRankSum=1.384;QD=3.19;ReadPosRankSum=9.736;VQSLOD=-0.3920;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:24:29.55:0,30,209	0/1:6,0:6:23.96:24,0,45	0/0:38,0:22:53.34:0,53,827	0/0:30,0:17:30.72:0,31,526	0/0:13,0:13:32.94:0,33,449	0/1:11,0:11:12.48:35,0,12	0/1:14,0:15:35.11:79,0,35	0/0:21,0:18:53.96:0,54,514	0/1:24,0:23:0.81:1,0,60	0/1:16,1:17:73.61:74,0,132	0/1:14,0:14:34.73:35,0,118	0/1:16,0:15:40.65:41,0,97	0/0:13,0:13:33.08:0,33,537	0/1:16,0:15:16.26:83,0,16	0/1:17,0:17:26.62:27,0,113	1/1:7,1:8:16.43:74,16,0	1/1:20,1:20:0.04:102,0,0	0/1:16,0:15:36.37:72,0,36	0/0:11,0:11:9.03:0,9,189	0/0:16,0:16:20.87:0,21,159	0/1:22,0:21:81.98:82,0,105	0/1:17,0:16:25.06:25,0,69	0/0:19,0:19:50.99:0,51,690	0/0:32,1:31:81.11:0,81,1343	1/1:13,0:12:1.95:89,2,0	0/1:28,0:24:48.32:116,0,48	0/0:5,11:16:6.46:0,6,94	1/1:12,0:12:16.08:80,16,0
chr10	64114689	.	AGT	A	5115.28	PASS	AB=1.000;AC=39;AF=0.722;AN=54;BaseQRankSum=-0.134;DP=533;FS=6.102;HRun=0;HaplotypeScore=79.4237;InbreedingCoeff=0.7891;MQ=65.95;MQ0=26;MQRankSum=0.851;QD=15.04;ReadPosRankSum=0.735;VQSLOD=3.8197;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:27:2.84:14,3,0	0/1:6,0:6:26.65:67,0,27	0/0:38,0:22:33:0,33,417	0/0:29,0:16:13.93:0,14,224	0/0:15,0:14:18.06:0,18,228	1/1:13,0:13:20.97:218,21,0	1/1:15,1:16:33.02:388,33,0	0/0:21,0:18:3:0,3,38	1/1:7,18:24:5.95:55,6,0	1/1:7,10:17:32.47:352,32,0	1/1:13,0:13:23.92:245,24,0	1/1:15,0:14:20.97:216,21,0	0/0:16,0:16:26.99:0,27,343	1/1:17,0:16:32.99:348,33,0	1/1:17,0:17:18.04:214,18,0	1/1:9,0:9:21.02:245,21,0	1/1:22,0:21:24.05:396,24,0	1/1:16,0:15:12.15:326,12,0	1/1:13,0:13:10.35:100,10,0	./.	1/1:23,0:21:36.10:432,36,0	1/1:18,0:17:23.92:233,24,0	0/0:22,0:21:24.08:0,24,365	0/0:35,0:33:62.93:0,63,868	1/1:13,0:11:30.06:358,30,0	1/1:7,21:24:51.09:583,51,0	1/1:17,0:17:5.68:40,6,0	1/1:13,0:12:26.96:285,27,0
chr10	64114744	.	TGA	T	792.73	PASS	AB=1.000;AC=31;AF=0.674;AN=46;BaseQRankSum=3.407;DP=462;FS=0.000;HRun=0;HaplotypeScore=73.6830;InbreedingCoeff=0.2125;MQ=32.75;MQ0=105;MQRankSum=0.203;QD=2.27;ReadPosRankSum=-2.324;VQSLOD=1.0106;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:14:5.99:0,6,49	1/1:9,0:8:8.76:65,9,0	./.	./.	./.	1/1:15,1:12:5.63:44,6,0	0/0:14,0:6:0:0,0,0	./.	0/0:14,0:10:5.99:0,6,49	0/1:14,0:10:7.42:25,0,7	1/1:12,0:10:8.87:57,9,0	0/1:13,0:9:14.04:14,0,15	0/1:17,0:14:6.23:6,0,27	0/0:19,0:10:0:0,0,0	1/1:16,1:14:5.89:37,6,0	./.	1/1:27,0:20:11.68:78,12,0	1/1:30,0:15:7.38:61,7,0	1/1:25,0:17:5.95:44,6,0	0/0:12,0:9:0:0,0,0	1/1:27,0:13:6.09:43,6,0	1/1:16,0:12:8.78:54,9,0	0/1:12,0:10:3.98:15,0,4	0/1:43,0:25:56.88:57,0,81	1/1:18,0:12:17.09:90,17,0	1/1:22,0:14:17.55:103,18,0	1/1:14,0:11:11.90:85,12,0	1/1:16,0:11:5.93:40,6,0
chr10	64126175	.	TA	T	1789.21	PASS	AB=0.728;AC=27;AF=0.482;AN=56;BaseQRankSum=8.874;DP=291;FS=148.698;HRun=1;HaplotypeScore=103.6205;InbreedingCoeff=-0.3200;MQ=62.91;MQ0=0;MQRankSum=-8.320;QD=7.04;ReadPosRankSum=7.842;VQSLOD=0.6333;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:6,2:8:33.43:33,0,46	0/1:5,1:6:11.22:11,0,29	0/0:7,0:7:20.80:0,21,258	0/0:6,0:4:14.30:0,14,103	0/1:6,9:15:21.39:79,0,21	1/1:5,10:15:13.17:197,13,0	0/0:4,0:4:2.14:0,2,21	0/1:9,8:17:99:205,0,159	0/1:3,2:5:34.77:35,0,36	0/1:6,4:10:92.34:92,0,118	0/1:5,9:14:34.98:94,0,35	0/1:12,2:14:29:29,0,59	0/0:13,0:13:4.78:0,5,80	1/1:1,3:4:9.37:62,9,0	0/1:9,3:12:23.55:73,0,24	0/1:9,2:11:13.32:39,0,13	0/1:11,1:12:13.98:15,0,14	1/1:7,2:9:2.98:49,3,0	0/1:9,4:13:98.26:109,0,98	0/1:8,6:14:99:100,0,100	0/0:3,0:3:1.90:0,2,23	0/1:3,7:10:0.68:112,0,1	0/1:4,8:12:5.43:141,0,5	1/1:3,0:3:0.89:2,1,0	0/1:9,12:21:86.68:225,0,87	0/1:6,7:13:57.38:175,0,57	1/1:14,2:16:7.34:65,7,0	0/0:3,1:4:0.19:0,0,0
chr10	64126179	.	ATG	A	2151.44	PASS	AB=0.745;AC=21;AF=0.375;AN=56;BaseQRankSum=10.968;DP=319;FS=80.230;HRun=0;HaplotypeScore=115.0569;InbreedingCoeff=-0.5992;MQ=66.88;MQ0=0;MQRankSum=-6.631;QD=7.94;ReadPosRankSum=3.787;VQSLOD=0.3331;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:8,2:10:35.85:36,0,352	0/1:5,1:6:13.81:14,0,263	0/0:10,0:10:30.10:0,30,588	0/0:7,0:5:18.06:0,18,336	0/1:6,9:15:75.57:76,0,305	0/1:5,10:15:99:273,0,242	0/0:4,0:4:12.04:0,12,234	0/1:10,8:18:99:243,0,510	0/1:4,2:6:50.49:50,0,161	0/1:7,4:11:99:123,0,351	0/1:7,9:16:99:132,0,272	0/1:12,2:14:21.98:22,0,650	0/0:14,0:14:42.08:0,42,753	0/1:3,3:6:48.36:48,0,141	0/1:9,3:12:59.56:60,0,462	0/1:10,2:12:31.16:31,0,489	0/1:12,1:13:1.03:1,0,474	0/1:7,2:9:48.76:49,0,325	0/1:10,4:14:99:119,0,545	0/1:10,6:16:99:142,0,489	0/0:3,0:3:6.02:0,6,113	0/1:4,7:11:99:161,0,143	0/1:5,8:13:99:180,0,217	0/0:6,0:6:12.02:0,12,175	0/1:10,12:22:99:312,0,502	0/1:8,7:15:99:225,0,431	0/1:15,2:17:11.76:12,0,791	0/0:3,1:4:6.02:0,6,119
chr10	64132431	.	A	AGACAG	1612.40	PASS	AC=44;AF=1.000;AN=44;DP=217;FS=0.000;HRun=0;HaplotypeScore=238.3710;InbreedingCoeff=0.1441;MQ=30.00;MQ0=3;QD=8.10;VQSLOD=2.3920;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:9,0:9:2.04:6,2,0	1/1:3,0:3:6:55,6,0	./.	./.	./.	1/1:9,0:9:8.81:86,9,0	1/1:15,0:15:5.83:18,6,0	1/1:4,0:3:2.80:13,3,0	1/1:5,0:5:6.02:113,6,0	1/1:4,12:16:18.06:241,18,0	./.	1/1:9,0:9:6.01:66,6,0	1/1:11,0:11:11.03:67,11,0	1/1:12,0:11:10.56:53,11,0	1/1:9,0:9:5.93:45,6,0	1/1:12,0:12:18.57:163,19,0	1/1:10,0:10:6.02:102,6,0	1/1:9,0:9:17.93:193,18,0	1/1:1,4:5:10.06:110,10,0	1/1:7,0:6:3.48:40,3,0	1/1:8,0:8:2.69:7,3,0	./.	./.	1/1:10,0:10:1.25:3,1,0	1/1:11,0:11:2.04:6,2,0	1/1:10,0:10:13.16:112,13,0	1/1:8,0:8:13.89:124,14,0	1/1:7,0:7:6.48:65,6,0
chr10	64133871	.	TG	T	645.13	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.904;DP=501;FS=0.896;HRun=2;HaplotypeScore=47.1656;InbreedingCoeff=0.9656;MQ=90.18;MQ0=0;MQRankSum=-1.123;QD=32.26;ReadPosRankSum=1.512;VQSLOD=3.2521;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,20:20:57.19:740,57,0	0/0:4,0:4:12.04:0,12,180	0/0:22,0:22:63.18:0,63,875	0/0:22,0:22:63.21:0,63,940	0/0:24,0:24:66.22:0,66,988	0/0:27,0:27:78.26:0,78,1169	0/0:26,0:26:78.26:0,78,1167	0/0:20,0:20:57.18:0,57,818	0/0:16,0:16:45.14:0,45,655	0/0:24,0:24:66.22:0,66,989	0/0:13,0:13:39.13:0,39,583	0/0:16,0:16:48.16:0,48,719	0/0:18,0:18:54.18:0,54,803	0/0:15,0:15:39.13:0,39,584	0/0:19,0:18:51.17:0,51,764	0/0:15,0:15:42.13:0,42,610	0/0:21,0:21:63.21:0,63,944	0/0:20,0:20:60.20:0,60,899	0/0:18,0:18:51.17:0,51,764	0/0:8,0:8:21.07:0,21,315	0/0:25,0:25:75.25:0,75,1123	0/0:11,0:11:33.11:0,33,494	0/0:15,0:15:45.15:0,45,674	0/0:17,0:17:51.16:0,51,744	0/0:13,0:13:39.09:0,39,559	0/0:25,0:25:75.25:0,75,1106	0/0:17,0:17:48.15:0,48,697	0/0:10,0:10:30.10:0,30,450
chr10	64134393	.	TG	T	6748.30	PASS	AB=1.000;AC=41;AF=0.732;AN=56;BaseQRankSum=-2.394;DP=499;FS=36.681;HRun=10;HaplotypeScore=54.4155;InbreedingCoeff=0.7733;MQ=76.65;MQ0=0;MQRankSum=-1.816;QD=19.12;ReadPosRankSum=3.983;VQSLOD=3.2682;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:58:54.25:0,54,285	1/1:0,3:3:6:52,6,0	0/0:18,0:15:0.62:0,1,133	0/1:12,0:12:13.91:14,0,147	0/0:10,0:10:2.98:0,3,21	1/1:1,9:10:26.99:234,27,0	1/1:3,18:21:16.79:360,17,0	0/0:12,0:13:5.87:0,6,36	1/1:3,24:27:62.98:546,63,0	1/1:4,11:15:29.97:260,30,0	1/1:3,6:9:14.99:129,15,0	1/1:3,11:14:23.99:208,24,0	0/0:24,0:24:45.78:0,46,547	1/1:5,19:24:53.98:469,54,0	1/1:3,17:20:56.98:493,57,0	1/1:2,26:28:68.97:599,69,0	1/1:0,20:20:59.99:521,60,0	1/1:2,17:19:47.98:417,48,0	1/1:6,18:24:53.97:465,54,0	1/1:4,7:11:23.99:208,24,0	1/1:6,29:36:79.23:680,79,0	1/1:2,10:12:29.99:260,30,0	0/0:9,0:9:11.99:0,12,119	0/0:14,0:14:10.23:0,10,339	1/1:5,8:13:23.99:208,24,0	1/1:3,8:11:23.99:208,24,0	1/1:4,12:16:29.99:261,30,0	1/1:1,6:7:18:156,18,0
chr10	64135158	.	ATGCCCTCTTCTGGTG	A	30110.40	PASS	AB=0.666;AC=43;AF=0.827;AN=52;BaseQRankSum=6.122;DP=442;FS=19.083;HRun=0;HaplotypeScore=210.7249;InbreedingCoeff=0.5579;MQ=26.64;MQ0=82;MQRankSum=-3.983;QD=80.08;ReadPosRankSum=4.670;VQSLOD=3.2023;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,14:16:36.12:1558,36,0	1/1:1,7:7:21.07:945,21,0	./.	./.	1/1:4,26:26:63.22:2658,63,0	1/1:5,14:17:39.13:1693,39,0	1/1:3,8:9:24.08:1080,24,0	1/1:6,13:10:18.06:664,18,0	0/1:5,11:14:99:1448,0,174	1/1:5,10:14:33.11:1483,33,0	1/1:5,11:12:27.09:1088,27,0	1/1:6,13:17:36.12:1558,36,0	0/0:9,0:8:21.07:0,21,1570	1/1:2,5:6:12.04:540,12,0	1/1:3,11:12:33.11:1484,33,0	1/1:3,10:12:27.09:1153,27,0	1/1:8,11:14:21.07:945,21,0	0/1:10,5:6:20.21:525,0,20	1/1:5,11:12:33.11:1485,33,0	1/1:2,16:17:45.15:2009,45,0	1/1:9,2:4:3.90:137,4,0	1/1:3,8:7:21.07:945,21,0	0/0:13,0:13:27.09:0,27,1727	0/0:30,0:21:42.14:0,42,2456	1/1:5,10:13:30.10:1349,30,0	1/1:3,17:18:42.14:1890,42,0	1/1:7,18:20:48.16:2159,48,0	0/1:9,10:14:84.82:1316,0,85
chr10	64135216	.	T	TAA	6043.91	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=7.841;DP=451;FS=13.527;HRun=9;HaplotypeScore=240.3139;InbreedingCoeff=0.8837;MQ=52.82;MQ0=15;MQRankSum=-9.541;QD=17.88;ReadPosRankSum=-0.767;VQSLOD=0.5939;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:20,1:22:56.47:456,56,0	1/1:10,0:10:12.67:144,13,0	0/0:22,0:9:16.78:0,17,186	0/0:40,0:18:13.04:0,13,125	1/1:25,0:25:8.58:110,9,0	1/1:18,3:22:58.97:551,59,0	1/1:8,0:9:13.52:144,14,0	1/1:23,0:22:40.97:380,41,0	1/1:12,0:12:29.98:262,30,0	1/1:14,0:15:41.20:381,41,0	1/1:17,0:15:24.66:230,25,0	1/1:13,0:14:22.56:207,23,0	0/0:13,0:13:30.05:0,30,319	1/1:9,0:9:15.68:121,16,0	1/1:9,0:9:20.51:176,21,0	1/1:13,0:13:30.92:284,31,0	1/1:21,1:21:44.57:390,45,0	1/1:8,1:9:18.03:199,18,0	1/1:9,1:10:18.05:210,18,0	1/1:19,0:19:43.30:371,43,0	1/1:1,0:1:3:27,3,0	1/1:8,1:9:20.96:219,21,0	0/0:13,0:13:36.05:0,36,371	0/0:23,0:23:57.14:0,57,604	1/1:17,0:18:48.76:419,49,0	1/1:17,0:17:38.81:346,39,0	1/1:20,1:23:41.32:411,41,0	1/1:8,0:8:1.82:5,2,0
chr10	64135223	.	AAAC	A	7156.94	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=9.223;DP=438;FS=14.339;HRun=0;HaplotypeScore=220.4044;InbreedingCoeff=0.8231;MQ=63.51;MQ0=7;MQRankSum=-10.175;QD=22.87;ReadPosRankSum=0.917;VQSLOD=3.5787;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:21,1:22:53.31:687,53,0	1/1:7,0:7:18.02:172,18,0	0/0:33,0:15:1.34:0,1,334	0/0:44,0:20:15.80:0,16,178	1/1:19,0:19:39.97:355,40,0	1/1:23,0:23:65.91:594,66,0	1/1:9,0:9:21.02:225,21,0	1/1:20,0:19:50.45:519,50,0	1/1:10,1:11:30.09:420,30,0	1/1:17,0:17:40.42:390,40,0	1/1:14,1:14:29.35:239,29,0	1/1:10,1:11:24.03:241,24,0	0/0:14,0:14:42.07:0,42,712	1/1:8,0:8:2.81:112,3,0	1/1:8,0:8:20.77:183,21,0	1/1:12,0:12:30.93:291,31,0	1/1:22,0:21:47.29:416,47,0	1/1:9,0:10:20.82:180,21,0	1/1:11,0:10:19.28:185,19,0	1/1:19,0:19:45.97:400,46,0	1/1:1,0:1:3:29,3,0	1/1:7,2:9:20.52:191,21,0	0/0:13,0:13:39.13:0,39,768	0/0:21,0:21:57.19:0,57,1134	1/1:18,0:18:49.87:469,50,0	1/1:16,1:17:32.81:342,33,0	1/1:18,3:21:50.12:503,50,0	1/1:3,0:3:2.88:15,3,0
chr10	64135224	.	AAC	A	6679.13	PASS	AB=1.000;AC=47;AF=0.839;AN=56;BaseQRankSum=9.520;DP=434;FS=17.791;HRun=0;HaplotypeScore=211.1162;InbreedingCoeff=0.8084;MQ=63.73;MQ0=7;MQRankSum=-10.728;QD=19.59;ReadPosRankSum=1.058;VQSLOD=3.7826;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:22:56.96:512,57,0	1/1:6,1:7:18.03:183,18,0	0/1:34,0:16:0:0,0,248	0/0:45,0:21:4.28:0,4,149	1/1:5,14:19:50.48:546,50,0	1/1:23,0:23:64.58:582,65,0	1/1:6,1:7:20.86:197,21,0	1/1:19,1:19:47.54:354,48,0	1/1:11,0:11:30.02:274,30,0	1/1:16,0:16:40.05:351,40,0	1/1:15,0:14:29.84:268,30,0	1/1:10,0:10:23.78:218,24,0	0/0:14,0:14:42.07:0,42,592	1/1:8,0:8:10.76:152,11,0	1/1:8,0:8:21.04:204,21,0	1/1:12,0:12:31.30:296,31,0	1/1:22,0:21:46.55:412,47,0	1/1:10,0:10:23.18:169,23,0	1/1:11,0:10:18.48:146,18,0	1/1:18,1:19:46.74:403,47,0	1/1:1,0:1:3.01:32,3,0	1/1:9,0:9:20.19:158,20,0	0/0:13,0:13:39.11:0,39,616	0/0:21,0:21:57.17:0,57,901	1/1:17,1:18:49.57:456,50,0	1/1:16,0:16:29.88:313,30,0	1/1:20,0:20:49.11:439,49,0	1/1:3,0:3:2.88:15,3,0
chr10	64135228	.	AAACC	A	10408.25	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=7.253;DP=424;FS=5.783;HRun=0;HaplotypeScore=197.8805;InbreedingCoeff=0.8881;MQ=65.61;MQ0=8;MQRankSum=-8.942;QD=36.27;ReadPosRankSum=0.940;VQSLOD=4.5101;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:20,1:21:56.62:644,57,0	1/1:5,1:6:17.55:216,18,0	0/0:43,0:21:5.55:0,6,371	0/0:45,0:22:20.04:0,20,250	1/1:16,2:18:37.09:376,37,0	1/1:21,3:24:68.77:912,69,0	1/1:6,1:7:20.28:247,20,0	1/1:14,5:18:47.37:669,47,0	1/1:10,0:10:30.05:360,30,0	1/1:11,5:16:45.14:643,45,0	1/1:11,1:11:32.78:439,33,0	1/1:7,2:9:24.07:313,24,0	0/0:14,0:14:38.54:0,39,674	1/1:6,2:8:21.06:301,21,0	1/1:7,0:7:21.04:268,21,0	1/1:10,1:11:33.11:460,33,0	1/1:19,2:20:57.17:829,57,0	1/1:9,0:9:26.05:350,26,0	1/1:7,3:9:23.06:305,23,0	1/1:14,3:17:51.11:710,51,0	1/1:1,0:1:3.01:39,3,0	1/1:7,2:9:23.66:310,24,0	0/0:14,0:14:39.13:0,39,685	0/0:20,0:20:53.92:0,54,968	1/1:16,2:18:54.18:766,54,0	1/1:12,3:15:39.10:566,39,0	1/1:13,4:17:49.17:628,49,0	1/1:0,2:2:3.01:57,3,0
chr10	64135230	.	ACC	A	10803.32	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=7.519;DP=412;FS=10.044;HRun=2;HaplotypeScore=177.7750;InbreedingCoeff=0.8685;MQ=66.26;MQ0=9;MQRankSum=-9.292;QD=38.86;ReadPosRankSum=1.215;VQSLOD=3.5914;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,16:20:56.68:828,57,0	1/1:2,4:6:18.04:266,18,0	0/0:42,1:20:34.37:0,34,422	0/0:44,0:22:2.19:0,2,192	1/1:18,0:18:44.72:363,45,0	1/1:4,19:23:66.19:995,66,0	1/1:2,5:7:21.04:282,21,0	1/1:6,11:17:47.28:599,47,0	1/1:1,9:10:30.09:438,30,0	1/1:5,11:16:45.12:649,45,0	1/1:2,10:11:33.09:486,33,0	1/1:3,6:9:24.07:346,24,0	0/0:14,0:14:38.58:0,39,362	1/1:3,5:8:21.04:289,21,0	1/1:0,7:7:21.07:338,21,0	1/1:1,10:11:33.10:510,33,0	1/1:6,15:20:57.04:775,57,0	1/1:1,7:8:22.60:296,23,0	1/1:3,6:8:21.01:286,21,0	1/1:5,12:17:51.13:720,51,0	1/1:0,1:1:3.01:48,3,0	1/1:4,4:8:21.04:271,21,0	0/0:13,0:13:39.05:0,39,377	0/0:19,0:19:54.06:0,54,550	1/1:4,14:18:54.15:785,54,0	1/1:5,9:14:39.08:537,39,0	1/1:7,9:16:48.13:673,48,0	1/1:2,0:2:2.99:23,3,0
chr10	64135231	.	C	CA	4394.27	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=8.602;DP=415;FS=11.801;HRun=4;HaplotypeScore=194.8845;InbreedingCoeff=0.8272;MQ=66.04;MQ0=9;MQRankSum=-9.258;QD=15.75;ReadPosRankSum=1.152;VQSLOD=2.9380;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:21:47.71:260,48,0	1/1:6,0:6:14.80:98,15,0	0/0:44,0:21:2.34:0,2,192	0/0:44,0:22:4.33:0,4,163	1/1:6,12:18:29.38:199,29,0	1/1:23,0:23:59.74:365,60,0	1/1:7,0:7:16.11:95,16,0	1/1:17,0:17:43.46:245,43,0	1/1:10,0:10:27.07:155,27,0	1/1:16,0:16:42.19:255,42,0	1/1:12,0:11:26.46:183,26,0	1/1:9,0:9:20.18:121,20,0	0/0:14,0:14:40.55:0,41,233	1/1:8,0:8:17.06:107,17,0	1/1:7,0:7:19.97:127,20,0	1/1:11,0:11:32.44:207,32,0	1/1:18,3:20:54.93:389,55,0	1/1:8,0:8:23.59:157,24,0	1/1:9,0:8:17.80:126,18,0	1/1:16,1:17:50.15:328,50,0	1/1:1,0:1:2.96:19,3,0	1/1:8,0:8:17.36:111,17,0	0/0:13,0:13:38.15:0,38,237	0/0:19,0:19:49.95:0,50,344	1/1:17,1:18:53.17:360,53,0	1/1:13,1:14:36.57:234,37,0	1/1:16,0:16:29.02:239,29,0	1/1:2,0:2:2.84:14,3,0
chr10	64135487	.	C	CAAAAA	3870.44	PASS	AB=0.905;AC=44;AF=0.786;AN=56;BaseQRankSum=0.262;DP=393;FS=3.955;HRun=15;HaplotypeScore=85.6630;InbreedingCoeff=0.4711;MQ=72.95;MQ0=6;MQRankSum=-2.821;QD=12.06;ReadPosRankSum=-2.897;VQSLOD=-0.4226;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,1:18:26.63:355,27,0	1/1:2,0:3:4.43:19,4,0	0/0:44,0:16:4.68:0,5,55	0/1:46,0:21:49.83:50,0,82	0/0:11,0:12:14.63:0,15,186	1/1:4,0:9:12.04:156,12,0	1/1:5,0:12:12.04:172,12,0	1/1:10,0:17:12.04:119,12,0	1/1:10,0:11:0.38:113,0,0	1/1:7,0:20:18.38:447,18,0	1/1:5,0:4:3.01:49,3,0	1/1:6,0:7:9.03:134,9,0	0/0:7,0:9:17.92:0,18,224	1/1:9,0:8:13.83:168,14,0	1/1:8,0:8:10.99:123,11,0	1/1:1,1:6:9.03:154,9,0	1/1:9,0:25:21.06:308,21,0	1/1:9,0:16:10.35:112,10,0	1/1:10,0:12:18.05:233,18,0	1/1:4,0:6:9.03:119,9,0	1/1:3,4:10:9.03:142,9,0	0/1:1,0:1:0:0,0,0	0/0:2,0:3:2.91:0,3,42	0/1:10,0:11:31.03:31,0,160	1/1:3,4:9:9.03:155,9,0	1/1:8,1:21:28.89:455,29,0	1/1:9,0:15:17.65:257,18,0	0/1:7,0:16:0:1,0,0
chr10	64135690	.	T	TA	10473.29	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=0.994;DP=397;FS=1.920;HRun=5;HaplotypeScore=85.1105;InbreedingCoeff=0.9599;MQ=66.55;MQ0=1;MQRankSum=-7.802;QD=32.23;ReadPosRankSum=1.790;VQSLOD=5.3583;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,13:14:39.13:512,39,0	1/1:2,3:5:12.03:143,12,0	0/0:27,0:18:12.90:0,13,277	0/0:11,0:9:14:0,14,105	1/1:2,15:17:48.15:605,48,0	1/1:2,16:18:51.16:652,51,0	1/1:2,7:9:24.08:315,24,0	1/1:6,24:30:72.18:887,72,0	1/1:3,11:14:37.64:442,38,0	1/1:2,17:19:51.16:665,51,0	1/1:3,5:8:21.05:253,21,0	1/1:1,18:19:54.17:704,54,0	0/0:8,0:8:20.49:0,20,199	1/1:1,6:7:15.05:197,15,0	1/1:2,17:19:54.16:695,54,0	1/1:3,11:14:36.12:468,36,0	1/1:6,8:14:24.08:314,24,0	1/1:1,13:13:33.11:434,33,0	1/1:2,16:18:48.13:597,48,0	1/1:4,12:15:39.13:506,39,0	1/1:1,7:8:18.06:237,18,0	1/1:0,5:5:12.04:158,12,0	0/0:10,0:10:27.07:0,27,290	0/0:16,0:16:48.01:0,48,485	1/1:2,16:18:42.14:552,42,0	1/1:3,12:15:36.12:469,36,0	1/1:4,11:15:45.12:559,45,0	1/1:6,3:9:12.40:108,12,0
chr10	64135706	.	TA	T	4635	PASS	AB=0.853;AC=40;AF=0.714;AN=56;BaseQRankSum=3.916;DP=382;FS=19.641;HRun=11;HaplotypeScore=109.7215;InbreedingCoeff=0.7727;MQ=63.60;MQ0=1;MQRankSum=-6.140;QD=17.56;ReadPosRankSum=2.208;VQSLOD=4.2323;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:30.08:0,30,320	1/1:0,4:4:11.99:98,12,0	0/0:23,1:15:3.21:0,3,205	0/1:12,0:10:5.11:5,0,74	0/0:4,0:16:31.48:0,31,166	1/1:2,12:15:37.99:301,38,0	1/1:3,7:10:17.97:148,18,0	0/0:30,1:31:35.51:0,36,577	1/1:3,11:14:20.68:261,21,0	1/1:3,20:23:56.92:468,57,0	1/1:1,9:10:23.96:197,24,0	1/1:3,18:21:43.55:451,44,0	0/0:9,0:9:21.04:0,21,216	1/1:1,6:7:17.97:145,18,0	1/1:3,12:15:35.96:295,36,0	1/1:0,13:13:38.96:320,39,0	1/1:1,9:10:17.96:148,18,0	1/1:4,9:13:20.96:172,21,0	0/1:7,5:12:14.03:105,0,14	1/1:5,14:19:12.88:304,13,0	1/1:1,5:6:11.98:98,12,0	1/1:2,3:5:8.98:74,9,0	0/0:10,0:10:9.01:0,9,90	0/0:15,0:16:14.75:0,15,342	1/1:3,12:15:35.95:295,36,0	1/1:2,14:16:12.96:313,13,0	1/1:1,12:13:35.95:295,36,0	1/1:7,4:11:19.89:142,20,0
chr10	64139844	.	A	AACACAC	6174.39	PASS	AB=0.828;AC=44;AF=0.786;AN=56;BaseQRankSum=1.930;DP=510;FS=24.420;HRun=0;HaplotypeScore=213.0143;InbreedingCoeff=0.3849;MQ=54.06;MQ0=1;MQRankSum=-7.690;QD=15.02;ReadPosRankSum=-5.978;VQSLOD=1.0222;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:10,0:27:36.57:37,0,103	1/1:1,2:3:6.02:131,6,0	0/0:18,0:10:6.02:0,6,80	0/1:23,0:18:13.49:13,0,203	1/1:5,0:10:1.15:24,1,0	1/1:10,7:17:15.04:369,15,0	1/1:20,6:29:17.55:285,18,0	1/1:15,0:14:22.87:377,23,0	0/1:22,0:22:15.64:261,0,16	1/1:9,0:10:9.50:198,10,0	1/1:11,1:13:2.89:50,3,0	1/1:11,11:22:15.05:224,15,0	0/0:19,0:19:41.59:0,42,785	1/1:15,10:25:19.30:340,19,0	1/1:9,15:24:27.09:542,27,0	1/1:6,17:24:20.15:517,20,0	1/1:9,3:14:21.07:556,21,0	0/1:7,6:13:48.38:321,0,48	1/1:16,1:17:21.36:349,21,0	1/1:2,7:12:20.07:348,20,0	1/1:29,0:32:1.60:32,2,0	1/1:3,6:9:3.01:56,3,0	0/0:12,0:13:20.75:0,21,379	0/0:47,0:48:85.89:0,86,1586	1/1:8,2:10:6.02:112,6,0	1/1:19,1:22:30.57:564,31,0	1/1:5,7:13:15.05:358,15,0	1/1:5,0:5:6.02:111,6,0
chr10	64139864	.	CTT	C	1557.22	PASS	AB=0.933;AC=25;AF=0.446;AN=56;BaseQRankSum=2.910;DP=507;FS=1.586;HRun=2;HaplotypeScore=149.3438;InbreedingCoeff=-0.4552;MQ=35.53;MQ0=9;MQRankSum=-5.169;QD=4.24;ReadPosRankSum=0.537;VQSLOD=-0.4607;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:23:23.99:24,0,283	0/1:5,0:5:37.69:42,0,38	0/0:25,1:9:27.08:0,27,376	0/1:22,1:14:10.40:10,0,465	0/1:10,0:10:8.19:8,0,194	0/1:18,0:17:45.98:46,0,94	0/1:21,1:22:67.58:84,0,68	0/1:15,6:19:99:170,0,584	0/1:11,10:21:99:284,0,146	0/1:12,2:14:29.55:30,0,191	1/1:11,3:14:0.96:29,1,0	0/1:21,0:21:46.49:46,0,96	0/0:23,0:23:59.87:0,60,921	0/1:28,1:29:35.40:109,0,35	1/1:21,0:21:1.24:219,1,0	0/1:18,0:18:88.57:113,0,89	0/0:11,0:11:6.22:0,6,224	0/1:8,1:9:9.80:10,0,202	0/1:15,2:16:39.43:39,0,344	0/1:19,0:19:71.96:215,0,72	0/0:21,3:22:8.13:0,8,74	0/1:11,0:11:2.85:28,0,3	0/0:13,0:13:24.61:0,25,351	0/0:43,0:43:92.53:0,93,1502	1/1:9,0:9:1.34:63,1,0	0/1:24,1:25:64.75:65,0,496	0/1:14,0:14:49.49:49,0,126	0/1:2,1:3:29.41:29,0,92
chr10	64139888	.	TACTCAC	T	1789.42	PASS	AB=1.000;AC=26;AF=0.464;AN=56;BaseQRankSum=1.756;DP=458;FS=16.563;HRun=0;HaplotypeScore=139.9214;InbreedingCoeff=0.5282;MQ=32.57;MQ0=7;MQRankSum=-3.496;QD=7.55;ReadPosRankSum=3.367;VQSLOD=1.7980;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:16.80:0,17,145	0/0:5,0:5:0.47:0,0,1	0/0:23,0:7:21:0,21,395	0/0:20,0:10:29.95:0,30,522	0/0:9,0:9:9.90:0,10,165	0/1:16,0:15:0.74:13,0,1	0/1:19,0:19:2.21:11,0,2	0/0:17,0:16:48.13:0,48,619	1/1:19,0:19:5.73:50,6,0	1/1:10,12:22:37.10:440,37,0	0/0:7,8:15:0.47:0,0,1	1/1:18,0:18:0.95:16,1,0	0/0:23,0:22:30.78:0,31,315	0/0:26,0:26:4.86:0,5,10	0/1:22,0:22:1.43:10,0,1	1/1:13,0:14:6.99:57,7,0	1/1:10,0:10:11.83:92,12,0	0/1:9,0:9:83.93:192,0,84	1/1:12,0:12:27.40:268,27,0	1/1:19,0:19:0.87:45,1,0	1/1:16,0:16:1.29:19,1,0	0/0:13,0:13:2.36:0,2,5	0/0:12,0:12:0.94:0,1,2	0/0:32,0:33:32.55:0,33,588	0/0:6,0:6:1.89:0,2,4	1/1:6,20:25:31.15:531,31,0	1/1:12,0:12:10.62:142,11,0	1/1:3,0:3:8.93:73,9,0
chr10	64140261	.	T	TAAATAAA	2842.55	PASS	AB=0.982;AC=35;AF=0.729;AN=48;BaseQRankSum=-0.124;DP=117;FS=14.754;HRun=0;HaplotypeScore=51.0633;InbreedingCoeff=0.2062;MQ=63.23;MQ0=0;MQRankSum=0.655;QD=28.14;ReadPosRankSum=-1.862;VQSLOD=1.3353;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:4,0:4:35.73:63,0,36	./.	0/1:2,0:2:0:0,0,0	0/1:6,0:4:0.50:0,0,10	0/1:7,0:7:12.08:98,0,12	1/1:3,0:3:3.01:96,3,0	1/1:1,1:2:3.01:102,3,0	0/1:15,0:14:57.43:173,0,57	./.	1/1:6,0:6:15.05:239,15,0	1/1:6,3:8:21:412,21,0	1/1:3,0:3:6.02:162,6,0	0/0:3,0:3:9.03:0,9,218	1/1:3,0:3:9.02:118,9,0	1/1:0,1:1:3.01:102,3,0	1/1:3,0:3:9.01:114,9,0	0/1:6,1:7:18.57:129,0,19	1/1:5,1:6:18.04:292,18,0	0/0:10,0:10:6.59:0,7,297	1/1:5,0:5:14.99:165,15,0	./.	1/1:1,0:1:3:28,3,0	0/0:3,0:3:9.03:0,9,199	./.	1/1:4,0:4:12.03:152,12,0	0/1:3,0:3:17.18:22,0,17	1/1:3,0:3:9.03:172,9,0	1/1:6,2:8:18.04:349,18,0
chr10	64141566	.	GT	G	10031.62	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=8.892;DP=457;FS=3.193;HRun=3;HaplotypeScore=58.6705;InbreedingCoeff=0.9596;MQ=44.95;MQ0=12;MQRankSum=-7.924;QD=29.42;ReadPosRankSum=-1.374;VQSLOD=3.7789;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,25:26:63.67:781,64,0	1/1:0,5:5:12.04:149,12,0	0/0:22,0:2:6.02:0,6,93	0/0:27,0:6:15.05:0,15,216	1/1:0,20:20:45.14:542,45,0	1/1:0,15:15:30.09:371,30,0	1/1:0,9:9:27.08:332,27,0	1/1:8,18:19:39.12:480,39,0	1/1:0,12:12:33.10:409,33,0	1/1:1,20:21:60.19:742,60,0	1/1:1,12:13:30.09:371,30,0	1/1:0,14:14:36.11:446,36,0	0/0:21,0:21:60.19:0,60,846	1/1:0,17:17:30.09:369,30,0	1/1:1,14:15:36.11:446,36,0	1/1:0,11:11:24.07:297,24,0	1/1:1,12:13:30.09:364,30,0	1/1:0,12:12:33.10:409,33,0	1/1:2,22:24:62.25:777,62,0	1/1:0,14:14:39.12:483,39,0	1/1:3,9:11:24.07:295,24,0	1/1:0,7:7:21.07:260,21,0	0/0:15,0:15:42.13:0,42,587	0/0:31,0:31:78.26:0,78,1121	1/1:0,9:9:21.07:260,21,0	1/1:0,16:16:45.14:557,45,0	1/1:0,21:21:51.16:632,51,0	1/1:1,8:9:21.07:260,21,0
chr10	64141683	.	CT	C	395.68	PASS	AB=0.889;AC=3;AF=0.058;AN=52;BaseQRankSum=3.565;DP=337;FS=0.803;HRun=11;HaplotypeScore=41.1162;InbreedingCoeff=0.4433;MQ=55.70;MQ0=8;MQRankSum=2.323;QD=9.89;ReadPosRankSum=1.363;VQSLOD=1.8634;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,26:31:33.93:485,34,0	0/0:4,0:4:12.03:0,12,128	0/0:3,0:1:3:0,3,29	./.	0/0:17,0:17:36.03:0,36,370	0/0:16,0:17:47.93:0,48,480	0/0:8,0:8:21.05:0,21,224	0/0:33,0:27:41.49:0,41,623	0/1:7,1:8:12.61:13,0,84	0/0:20,0:20:48.11:0,48,504	0/0:11,0:12:26.86:0,27,257	0/0:4,0:4:9.01:0,9,89	0/0:10,0:10:21.05:0,21,224	0/0:2,0:3:8.86:0,9,78	0/0:8,0:9:18.04:0,18,186	0/0:6,0:6:12:0,12,117	0/0:20,1:19:17.34:0,17,369	0/0:16,0:17:44.81:0,45,445	0/0:20,0:18:32.94:0,33,323	0/0:13,0:13:27.02:0,27,269	./.	0/0:1,0:2:3.01:0,3,32	0/0:5,0:5:12.03:0,12,128	0/0:7,1:8:18:0,18,180	0/0:9,0:9:18.03:0,18,185	0/0:16,0:17:44.94:0,45,456	0/0:15,0:14:27.06:0,27,281	0/0:17,0:17:51.13:0,51,544
chr10	64141788	.	TAAA	T	5299.97	PASS	AB=1.000;AC=37;AF=0.685;AN=54;BaseQRankSum=-3.440;DP=348;FS=10.741;HRun=13;HaplotypeScore=53.7780;InbreedingCoeff=0.8703;MQ=58.78;MQ0=8;MQRankSum=-1.976;QD=22.18;ReadPosRankSum=4.712;VQSLOD=2.3479;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:22:45.69:0,46,334	1/1:0,6:6:18.06:219,18,0	0/1:25,0:8:2.07:2,0,234	0/0:18,0:5:8.62:0,9,105	0/0:24,0:24:51.16:0,51,891	1/1:2,12:14:30.07:364,30,0	1/1:2,11:13:30.09:365,30,0	0/0:6,1:24:24.62:0,25,69	0/0:3,0:6:5.99:0,6,48	1/1:3,14:17:39.09:474,39,0	1/1:1,11:12:33.09:401,33,0	1/1:2,5:7:12.03:146,12,0	0/0:6,0:6:12.03:0,12,200	1/1:0,4:4:5.73:73,6,0	1/1:0,9:9:21.06:255,21,0	1/1:1,7:8:15.03:182,15,0	1/1:2,14:16:36.11:438,36,0	1/1:5,13:18:30.04:365,30,0	1/1:3,11:11:30.07:354,30,0	1/1:6,10:16:30:346,30,0	1/1:0,7:7:21.06:255,21,0	./.	0/0:3,0:4:11.98:0,12,158	0/0:4,0:4:12.04:0,12,230	1/1:1,5:6:11.99:129,12,0	1/1:7,10:17:26.98:312,27,0	1/1:7,10:18:23.96:273,24,0	1/1:1,9:11:30.02:346,30,0
chr10	64141967	.	TC	T	4838.79	PASS	AB=1.000;AC=43;AF=0.768;AN=56;BaseQRankSum=-5.868;DP=511;FS=8.290;HRun=1;HaplotypeScore=85.8750;InbreedingCoeff=0.8074;MQ=73.82;MQ0=5;MQRankSum=-0.539;QD=12.83;ReadPosRankSum=-6.244;VQSLOD=1.0116;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:26.31:0,26,263	1/1:5,0:5:11.61:95,12,0	0/0:33,0:21:17.43:0,17,244	0/0:46,2:29:16.28:0,16,346	0/1:20,0:20:14.98:15,0,150	1/1:16,0:16:38.68:324,39,0	1/1:10,1:11:17.82:126,18,0	1/1:21,1:21:40.23:319,40,0	1/1:7,3:10:14.27:135,14,0	1/1:22,0:22:42.13:316,42,0	1/1:23,2:25:50.09:386,50,0	1/1:11,3:14:21.49:224,21,0	0/0:12,0:12:18.01:0,18,326	1/1:7,0:7:9.14:61,9,0	1/1:8,1:9:2.76:43,3,0	1/1:11,0:11:3.14:68,3,0	1/1:26,1:27:27.29:307,27,0	1/1:33,0:33:40.35:370,40,0	1/1:19,1:18:41.53:381,42,0	1/1:23,0:23:39.47:337,39,0	1/1:9,1:10:21.50:155,21,0	1/1:7,0:7:13.35:106,13,0	0/0:12,0:12:36.04:0,36,414	0/0:9,0:9:18.80:0,19,255	1/1:18,0:18:19.04:109,19,0	1/1:21,0:21:51.71:422,52,0	1/1:25,1:26:29.76:279,30,0	1/1:17,3:20:26.29:259,26,0
chr10	64142818	.	CCAA	C	962.86	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.111;DP=552;FS=0.890;HRun=0;HaplotypeScore=80.1345;InbreedingCoeff=0.9946;MQ=76.33;MQ0=0;MQRankSum=-1.645;QD=37.03;ReadPosRankSum=2.577;VQSLOD=3.8751;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:90.31:0,90,2082	0/0:9,0:9:27.09:0,27,639	0/0:14,0:14:38.96:0,39,724	0/0:17,0:17:40.38:0,40,849	0/0:28,0:28:84.29:0,84,1928	0/0:15,0:15:45.15:0,45,1043	0/0:18,0:18:54.19:0,54,1277	0/0:37,0:37:99:0,111,2590	1/1:0,26:26:60.21:1058,60,0	0/0:22,0:22:66.23:0,66,1532	0/0:24,0:24:69.24:0,69,1621	0/0:24,0:24:72.25:0,72,1644	0/0:16,0:16:48.16:0,48,1133	0/0:14,0:14:42.14:0,42,974	0/0:21,0:21:63.20:0,63,1444	0/0:24,0:24:72.25:0,72,1662	0/0:21,0:21:54.19:0,54,1215	0/0:15,0:15:42.14:0,42,943	0/0:16,0:16:48.12:0,48,1084	0/0:17,0:17:51.18:0,51,1172	0/0:24,0:24:72.25:0,72,1680	0/0:14,0:14:39.13:0,39,889	0/0:13,0:13:39.13:0,39,901	0/0:27,0:27:81.28:0,81,1915	0/0:16,0:16:48.16:0,48,1115	0/0:25,0:25:69.23:0,69,1571	0/0:17,0:17:51.18:0,51,1187	0/0:7,0:7:21.07:0,21,497
chr10	64142950	.	GC	G	8729.47	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=2.777;DP=410;FS=13.694;HRun=6;HaplotypeScore=46.2437;InbreedingCoeff=0.9833;MQ=77.03;MQ0=0;MQRankSum=-0.859;QD=26.37;ReadPosRankSum=1.097;VQSLOD=3.6617;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,23:23:48.12:515,48,0	1/1:1,6:7:18.04:193,18,0	0/0:8,0:9:18.05:0,18,227	0/0:7,1:8:11.98:0,12,112	0/0:12,0:12:36.10:0,36,453	1/1:0,7:7:15.04:161,15,0	1/1:1,16:17:36.09:387,36,0	1/1:5,12:17:33.08:354,33,0	1/1:1,15:16:42.10:451,42,0	1/1:3,14:17:42.10:449,42,0	1/1:1,8:9:17.96:193,18,0	1/1:0,15:15:39.10:419,39,0	0/0:10,0:10:27.09:0,27,355	1/1:2,14:16:42.10:451,42,0	1/1:2,17:19:42.10:451,42,0	1/1:4,16:20:42.10:451,42,0	1/1:1,23:24:63.16:677,63,0	1/1:0,7:7:21.05:225,21,0	1/1:0,7:7:21.05:225,21,0	1/1:0,13:13:36.09:386,36,0	1/1:2,21:23:45.11:484,45,0	1/1:0,17:17:48.12:515,48,0	0/0:18,0:18:45.15:0,45,588	0/0:22,0:22:66.21:0,66,854	1/1:0,10:10:30.08:322,30,0	1/1:1,21:22:63.16:677,63,0	1/1:0,14:14:39.10:419,39,0	1/1:0,11:11:30.08:322,30,0
chr10	64143380	.	CT	C	6430.67	PASS	AB=0.947;AC=48;AF=0.857;AN=56;BaseQRankSum=5.746;DP=532;FS=5.959;HRun=13;HaplotypeScore=86.0383;InbreedingCoeff=0.6851;MQ=66.13;MQ0=11;MQRankSum=0.259;QD=13.60;ReadPosRankSum=2.347;VQSLOD=5.2790;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:21,17:37:77.43:562,77,0	1/1:1,4:5:11.92:87,12,0	0/0:33,0:10:11.89:0,12,92	0/1:25,0:8:9.74:10,0,17	1/1:3,17:20:47.51:341,48,0	1/1:4,20:24:61.67:444,62,0	1/1:2,11:14:5.64:192,6,0	1/1:12,21:33:27.33:360,27,0	1/1:2,11:13:29.82:219,30,0	1/1:5,19:25:58.63:417,59,0	1/1:5,10:17:33.77:224,34,0	1/1:2,12:14:29.83:219,30,0	0/0:12,0:12:21.43:0,21,280	1/1:2,7:9:20.87:153,21,0	1/1:7,10:16:29.81:219,30,0	1/1:3,6:10:22.91:159,23,0	1/1:6,21:32:28.38:358,28,0	1/1:3,11:13:32.80:241,33,0	1/1:7,12:20:10.08:198,10,0	1/1:6,8:14:23.82:175,24,0	1/1:2,12:15:32.80:241,33,0	1/1:0,12:12:35.80:263,36,0	0/0:14,0:14:36.04:0,36,343	0/1:15,2:17:10.44:10,0,230	1/1:0,13:13:32.81:241,33,0	1/1:7,18:26:58.65:418,59,0	1/1:6,27:34:51.89:492,52,0	1/1:3,8:10:26.66:188,27,0
chr10	64143400	.	C	CT	651.19	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-0.843;DP=546;FS=2.774;HRun=8;HaplotypeScore=95.8805;InbreedingCoeff=0.7532;MQ=59.89;MQ0=21;MQRankSum=-1.237;QD=16.28;ReadPosRankSum=-0.832;VQSLOD=3.5497;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:27,12:38:44.75:746,45,0	0/0:6,0:6:15.01:0,15,137	0/0:33,0:6:1.98:0,2,6	0/0:24,0:4:2.16:0,2,7	0/0:31,0:31:62.12:0,62,570	0/0:26,0:26:57.01:0,57,517	0/0:18,0:18:47.99:0,48,439	0/0:19,0:19:32.87:0,33,284	0/0:8,0:8:18:0,18,165	0/0:24,0:24:53.98:0,54,490	0/0:16,0:15:36:0,36,325	0/0:13,0:13:24.01:0,24,220	0/0:13,0:13:30:0,30,274	0/0:10,0:10:21.01:0,21,192	0/0:21,0:19:41.71:0,42,370	0/0:11,0:11:24.01:0,24,219	0/0:31,0:31:53.97:0,54,493	0/0:17,0:15:23.99:0,24,215	0/0:17,0:17:23.97:0,24,220	0/0:12,0:12:24:0,24,215	0/0:17,0:17:32.97:0,33,294	0/0:12,0:12:27.01:0,27,247	0/0:20,0:20:44.99:0,45,407	0/0:19,0:19:22.16:0,22,328	0/0:13,0:13:29.91:0,30,254	0/0:23,0:23:50.95:0,51,455	0/0:35,0:33:56.82:0,57,517	0/0:15,0:14:29.91:0,30,252
chr10	64144245	.	CG	C	590.46	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=4.815;DP=376;FS=6.426;HRun=1;HaplotypeScore=37.8930;InbreedingCoeff=0.7961;MQ=52.64;MQ0=17;MQRankSum=0.900;QD=25.67;ReadPosRankSum=-1.083;VQSLOD=2.8034;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,102,1579	0/0:4,0:4:12.04:0,12,191	0/0:11,0:1:3.01:0,3,48	0/0:16,0:2:6.02:0,6,96	1/1:0,11:11:21.07:291,21,0	0/0:15,0:15:39.13:0,39,618	0/0:22,0:21:63.21:0,63,1006	0/0:17,0:17:48.15:0,48,744	1/1:1,11:10:30.10:419,30,0	0/0:12,0:12:30.10:0,30,478	0/0:5,0:5:12.04:0,12,191	0/0:12,0:11:30.10:0,30,479	0/0:14,0:14:42.14:0,42,664	0/0:9,0:9:27.09:0,27,431	0/0:18,0:18:45.33:0,45,762	0/0:7,0:7:21.07:0,21,321	0/0:24,0:24:60.18:0,60,933	0/0:14,0:14:36.08:0,36,547	0/0:11,0:9:27.08:0,27,410	0/0:4,0:4:12.04:0,12,191	0/0:26,0:25:66.21:0,66,1030	0/0:6,0:6:15.05:0,15,236	0/0:7,0:7:15.05:0,15,239	0/0:30,0:30:87.30:0,87,1389	0/0:11,0:11:26.74:0,27,430	0/0:9,0:9:27.09:0,27,429	0/0:10,0:10:27.09:0,27,430	0/0:5,0:4:9.03:0,9,144
chr10	64144503	.	ATG	A	7410.10	PASS	AB=0.816;AC=51;AF=0.911;AN=56;BaseQRankSum=2.918;DP=425;FS=21.743;HRun=0;HaplotypeScore=132.9036;InbreedingCoeff=-0.0940;MQ=53.62;MQ0=16;MQRankSum=-0.462;QD=17.44;ReadPosRankSum=0.094;VQSLOD=2.9416;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:28,3:33:56.81:622,57,0	1/1:3,0:3:5.97:92,6,0	0/1:31,2:6:81.72:82,0,100	0/1:25,8:9:12.71:347,0,13	1/1:5,3:9:8.88:82,9,0	1/1:9,9:18:33.63:343,34,0	1/1:9,9:19:29.10:256,29,0	1/1:0,17:17:48.63:642,49,0	1/1:4,2:8:14.68:171,15,0	1/1:7,8:15:34.94:513,35,0	1/1:4,1:5:8.52:112,9,0	1/1:10,5:14:29.15:332,29,0	1/1:0,1:8:6.02:67,6,0	1/1:19,1:20:41.68:390,42,0	1/1:16,3:20:32.01:481,32,0	1/1:6,5:11:14.02:247,14,0	1/1:18,2:21:33.22:380,33,0	1/1:10,4:14:14.29:422,14,0	1/1:3,2:5:14.07:157,14,0	1/1:4,2:5:10.77:93,11,0	1/1:16,5:19:14.90:181,15,0	0/1:4,5:9:1.86:76,0,2	1/1:0,9:9:10.50:91,10,0	0/1:23,3:27:0.13:418,0,0	0/1:7,2:8:3.01:147,0,3	1/1:10,6:16:32.62:419,33,0	1/1:2,4:9:12.15:112,12,0	1/1:6,2:8:13.44:135,13,0
chr10	64144760	.	A	AT	4003.52	PASS	AB=0.736;AC=35;AF=0.625;AN=56;BaseQRankSum=-3.251;DP=481;FS=0.000;HRun=13;HaplotypeScore=73.6102;InbreedingCoeff=0.0590;MQ=68.45;MQ0=9;MQRankSum=-1.161;QD=9.86;ReadPosRankSum=-0.514;VQSLOD=2.8103;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:7,14:21:31.05:281,0,31	1/1:2,2:4:6.01:56,6,0	0/1:12,0:11:11.45:11,0,48	0/0:12,0:11:9.63:0,10,63	1/1:7,0:14:28.47:146,28,0	0/1:10,5:15:17.22:132,0,17	1/1:5,13:20:35.82:309,36,0	0/1:21,0:21:6.51:7,0,152	1/1:13,0:15:34.10:185,34,0	0/1:8,7:14:20.15:112,0,20	1/1:5,11:16:23.93:206,24,0	0/1:8,6:14:8.26:68,0,8	0/0:12,0:13:28.80:0,29,191	1/1:10,7:17:26.97:238,27,0	0/1:11,6:16:5.58:88,0,6	1/1:1,11:12:12.46:258,12,0	1/1:6,11:17:15.40:270,15,0	1/1:10,15:24:16.52:292,17,0	0/1:8,5:14:14.51:140,0,15	1/1:7,14:20:13.63:246,14,0	0/1:8,6:15:20.31:105,0,20	0/1:9,7:16:20.14:118,0,20	0/0:20,2:21:19.25:0,19,278	0/0:26,0:28:51.54:0,52,337	0/1:10,5:16:8.62:63,0,9	0/1:12,13:25:31.43:298,0,31	0/1:9,9:20:0.10:263,0,0	1/1:11,4:15:12.01:111,12,0
chr10	64145914	.	C	CAA	7988.30	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=-4.406;DP=412;FS=8.121;HRun=11;HaplotypeScore=51.9767;InbreedingCoeff=0.9375;MQ=60.17;MQ0=18;MQRankSum=-1.719;QD=25.44;ReadPosRankSum=-1.919;VQSLOD=3.5064;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:12,24:37:73.70:967,74,0	1/1:1,4:4:12.04:174,12,0	0/0:10,0:6:8.67:0,9,52	0/0:9,0:4:5.45:0,5,56	0/0:16,0:16:33.02:0,33,320	1/1:5,10:15:33.11:474,33,0	1/1:4,4:9:15.04:179,15,0	1/1:10,13:23:31.01:654,31,0	0/0:12,0:12:30.04:0,30,291	1/1:1,12:14:39.12:531,39,0	1/1:1,8:10:18.04:227,18,0	1/1:5,9:14:24.07:333,24,0	0/0:11,0:11:26.77:0,27,245	1/1:6,8:15:27.08:358,27,0	1/1:2,4:11:19.96:233,20,0	1/1:4,6:10:18.06:246,18,0	1/1:7,19:25:49.72:699,50,0	1/1:6,13:18:41.63:573,42,0	1/1:4,4:8:12.04:174,12,0	1/1:1,6:7:17.99:215,18,0	1/1:2,8:11:17.54:225,18,0	1/1:2,5:7:12.04:174,12,0	0/0:17,0:16:42.02:0,42,407	0/0:19,0:20:50.81:0,51,477	1/1:2,10:12:24.08:348,24,0	1/1:8,11:22:47.08:572,47,0	1/1:5,9:16:32.08:408,32,0	1/1:2,6:8:17.55:226,18,0
chr10	64146291	.	T	TA	924.94	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-4.945;DP=519;FS=1.464;HRun=9;HaplotypeScore=67.1225;InbreedingCoeff=0.9176;MQ=53.14;MQ0=24;MQRankSum=2.382;QD=21.51;ReadPosRankSum=0.199;VQSLOD=4.3420;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:71.97:0,72,624	0/0:11,0:10:23.98:0,24,208	0/0:5,0:4:11.04:0,11,84	0/0:3,0:2:6:0,6,52	1/1:5,15:19:39.05:417,39,0	0/0:17,0:17:38.98:0,39,338	0/0:15,0:14:38.98:0,39,335	0/0:32,0:26:68.94:0,69,589	1/1:4,19:22:57.15:629,57,0	0/0:22,0:22:56.97:0,57,492	0/0:18,0:17:41.98:0,42,365	0/0:21,0:21:50.99:0,51,442	0/0:16,0:16:41.99:0,42,365	0/0:15,0:15:35.98:0,36,309	0/0:18,0:18:38.96:0,39,339	0/0:14,0:14:35.97:0,36,312	0/0:28,0:25:71.98:0,72,625	0/0:18,0:17:41.99:0,42,365	0/0:29,0:29:80:0,80,677	0/0:18,0:18:53.97:0,54,464	0/0:15,0:8:14.98:0,15,130	0/0:10,0:9:18:0,18,156	0/0:11,0:11:29.99:0,30,260	0/0:14,0:11:26.99:0,27,234	0/0:22,0:22:32.73:0,33,445	0/0:21,0:21:44.98:0,45,391	0/0:35,0:35:89.95:0,90,781	0/0:17,0:17:50.99:0,51,442
chr10	64148608	.	T	TTAAA	18185.30	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-7.948;DP=473;FS=2.042;HRun=0;HaplotypeScore=68.0094;InbreedingCoeff=0.9281;MQ=55.76;MQ0=3;MQRankSum=-1.131;QD=45.81;ReadPosRankSum=-0.859;VQSLOD=5.0545;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,29:38:69.19:1681,69,0	1/1:2,6:8:21.07:507,21,0	0/0:12,0:8:6.49:0,6,83	0/0:12,0:8:6.02:0,6,59	1/1:7,19:26:51.13:1171,51,0	1/1:6,19:25:54.19:1359,54,0	1/1:0,6:7:15.05:356,15,0	1/1:14,7:21:24.05:356,24,0	1/1:1,8:10:24.08:583,24,0	1/1:4,11:15:33.11:831,33,0	1/1:4,19:24:57.15:1378,57,0	1/1:1,6:8:18.06:431,18,0	0/0:20,0:20:48.16:0,48,824	1/1:2,13:15:36.12:885,36,0	1/1:3,13:17:42.14:1052,42,0	1/1:3,13:17:33.11:831,33,0	1/1:4,16:20:42.14:1057,42,0	1/1:8,11:18:24.08:604,24,0	1/1:8,10:16:36.12:903,36,0	1/1:3,10:13:33.08:689,33,0	1/1:8,5:13:12.04:280,12,0	1/1:1,4:5:12.04:302,12,0	0/0:15,0:15:33.11:0,33,566	0/0:17,0:17:39.09:0,39,638	1/1:5,12:17:27.09:657,27,0	1/1:6,13:21:42.12:961,42,0	1/1:7,14:22:39.13:972,39,0	1/1:6,4:9:19.47:339,19,0
chr10	64148839	.	CAT	C	135.81	PASS	AB=0.984;AC=5;AF=0.089;AN=56;BaseQRankSum=2.462;DP=608;FS=8.015;HRun=0;HaplotypeScore=113.9963;InbreedingCoeff=0.2830;MQ=63.93;MQ0=3;MQRankSum=-1.649;QD=1.58;ReadPosRankSum=-0.357;VQSLOD=1.3072;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:44:68.90:0,69,608	0/0:12,0:12:21.07:0,21,370	0/0:19,0:12:28.92:0,29,285	0/0:14,0:8:16.76:0,17,165	0/1:27,0:27:7.18:7,0,97	0/0:19,0:19:17.97:0,18,244	0/0:29,0:29:14.41:0,14,224	0/1:25,0:25:10.91:11,0,424	1/1:2,12:14:15.94:211,16,0	0/0:27,0:27:78.19:0,78,1272	0/0:20,0:20:8.75:0,9,138	0/0:24,0:25:26.93:0,27,348	0/0:23,0:23:61.64:0,62,1014	0/0:16,0:16:21.05:0,21,314	0/0:23,0:23:24.03:0,24,339	0/1:19,1:20:20.82:21,0,243	0/0:28,0:27:4.07:0,4,232	0/0:11,0:11:18.02:0,18,251	0/0:11,0:11:33.06:0,33,540	0/0:14,0:14:18.05:0,18,287	0/0:35,0:35:21.07:0,21,360	0/0:14,0:14:5.88:0,6,48	0/0:16,0:16:36.11:0,36,597	0/0:28,0:27:72.09:0,72,1142	0/0:21,0:21:20.23:0,20,295	0/0:25,0:25:65.72:0,66,1070	0/0:21,0:21:15.32:0,15,437	0/0:26,0:26:21.06:0,21,376
chr10	64148853	.	T	TACATACAT	2120.61	PASS	AB=1.000;AC=20;AF=0.357;AN=56;BaseQRankSum=-0.598;DP=622;FS=17.326;HRun=0;HaplotypeScore=160.2366;InbreedingCoeff=0.1774;MQ=56.47;MQ0=10;MQRankSum=-0.276;QD=6.06;ReadPosRankSum=0.255;VQSLOD=1.5138;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:46,0:44:35.05:584,0,35	0/1:10,0:10:10.47:61,0,10	0/0:13,0:6:17.95:0,18,174	0/0:9,0:3:5.96:0,6,75	0/0:3,13:23:0.33:0,0,1	0/0:23,0:23:2.61:0,3,98	0/0:32,0:32:5.05:0,5,25	1/1:32,0:30:69.46:968,69,0	1/1:23,0:23:8.59:215,9,0	1/1:24,0:24:2.38:74,2,0	0/0:15,0:15:0.05:0,0,8	0/0:26,0:26:21.18:0,21,241	0/0:19,0:21:41.72:0,42,720	0/0:16,0:16:14.46:0,14,136	0/1:29,0:28:2.46:2,0,150	0/1:22,0:22:32.92:33,0,48	0/0:33,0:32:6.30:0,6,85	0/1:17,0:17:26.61:27,0,109	1/1:14,0:12:12.52:122,13,0	1/1:12,0:11:5.20:35,5,0	0/1:45,0:44:11.27:20,0,11	0/1:13,0:13:0.04:0,0,0	0/0:14,0:14:33.09:0,33,497	0/0:26,0:26:54.18:0,54,1100	0/1:21,0:21:10.05:10,0,38	0/1:23,0:23:4.07:113,0,4	0/0:19,0:19:15.75:0,16,149	0/1:19,0:18:9.23:18,0,9
chr10	64148855	.	C	CAT	5161.71	PASS	AB=0.644;AC=36;AF=0.643;AN=56;BaseQRankSum=-4.068;DP=632;FS=17.847;HRun=0;HaplotypeScore=105.3425;InbreedingCoeff=0.2337;MQ=56.36;MQ0=10;MQRankSum=2.529;QD=9.40;ReadPosRankSum=2.996;VQSLOD=3.4751;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:46,0:44:27.85:290,0,28	1/1:9,1:10:18.37:247,18,0	0/0:13,0:6:17.89:0,18,158	0/0:8,0:3:5.96:0,6,48	1/1:22,0:21:3.21:13,3,0	1/1:3,18:23:19.88:345,20,0	0/1:7,26:34:17.98:107,0,18	1/1:34,0:31:46.87:475,47,0	0/1:23,0:23:0.85:85,0,1	1/1:1,23:24:59.99:512,60,0	1/1:1,15:16:6.02:115,6,0	0/1:4,20:25:24.72:259,0,25	0/0:18,0:18:44.89:0,45,413	1/1:3,11:14:4.36:166,4,0	0/1:5,23:27:47.66:158,0,48	0/1:4,17:22:2.85:291,0,3	0/1:9,26:34:12.81:210,0,13	0/1:7,10:18:59.88:208,0,60	1/1:15,0:13:25.49:204,25,0	1/1:2,10:12:8.77:120,9,0	1/1:8,39:47:9.03:165,9,0	0/1:1,12:13:0:0,0,0	0/0:15,0:15:32.98:0,33,323	0/0:29,0:27:65.92:0,66,711	1/1:2,20:23:9:115,9,0	1/1:4,20:24:54.23:546,54,0	0/1:2,17:20:12.32:385,0,12	1/1:2,17:18:9.03:148,9,0
chr10	64149128	.	A	ATTTC	4489.63	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-9.012;DP=651;FS=4.446;HRun=0;HaplotypeScore=100.7452;InbreedingCoeff=0.9981;MQ=68.04;MQ0=0;MQRankSum=-1.813;QD=42.35;ReadPosRankSum=-2.124;VQSLOD=4.4764;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,19:25:57.20:1409,57,0	0/0:15,0:15:36.12:0,36,602	0/0:17,0:16:22.73:0,23,323	0/0:19,0:18:26.43:0,26,360	1/1:11,22:31:59.98:1211,60,0	0/0:33,0:33:69.22:0,69,1128	0/0:19,0:19:49.29:0,49,850	1/1:13,8:23:42.07:832,42,0	1/1:6,17:24:42.14:1038,42,0	0/0:31,0:31:78.24:0,78,1275	0/0:29,0:29:75.24:0,75,1229	0/0:27,0:27:69.23:0,69,1130	0/0:26,0:26:72.23:0,72,1178	0/0:8,0:8:24.08:0,24,401	0/0:16,0:16:33.10:0,33,529	0/0:16,0:16:42.14:0,42,702	0/0:24,0:24:51.14:0,51,801	0/0:25,0:25:57.15:0,57,915	0/0:21,0:21:42.12:0,42,675	0/0:17,0:17:45.15:0,45,748	0/0:17,0:17:45.15:0,45,747	0/0:29,0:29:81.26:0,81,1326	0/0:31,0:31:81.28:0,81,1354	0/0:13,0:13:36.12:0,36,602	0/0:29,0:29:57.16:0,57,878	0/0:34,0:34:84.02:0,84,1366	0/0:33,0:33:66.22:0,66,1092	0/0:16,0:16:36.12:0,36,595
chr10	64149634	.	G	GT	2739	PASS	AB=0.652;AC=29;AF=0.580;AN=50;BaseQRankSum=-6.385;DP=386;FS=2.480;HRun=12;HaplotypeScore=42.0301;InbreedingCoeff=0.3196;MQ=56.79;MQ0=5;MQRankSum=1.845;QD=10.96;ReadPosRankSum=0.818;VQSLOD=2.5415;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:33:32.36:0,32,139	1/1:1,2:3:6.01:58,6,0	./.	./.	0/0:2,0:14:22.39:0,22,65	1/1:3,9:11:1.13:191,1,0	0/1:5,13:18:10.48:230,0,10	0/0:19,0:20:32.63:0,33,226	0/0:4,0:10:7.93:0,8,23	1/1:5,14:20:13.29:297,13,0	1/1:9,4:13:15.02:146,15,0	0/1:5,4:9:12.89:49,0,13	0/0:11,0:12:24.95:0,25,165	0/1:4,6:10:6.88:102,0,7	0/1:6,6:12:3.88:127,0,4	0/1:2,8:10:14.96:151,0,15	1/1:5,23:27:0.48:313,0,0	1/1:11,12:22:4.97:197,5,0	0/1:12,9:20:48.22:230,0,48	1/1:3,8:12:18.03:175,18,0	1/1:2,0:5:5.44:24,5,0	1/1:3,2:5:6.01:58,6,0	0/0:6,0:7:13.96:0,14,93	0/0:17,0:17:26.82:0,27,196	0/1:6,3:9:12.85:49,0,13	1/1:11,4:15:36.07:274,36,0	1/1:4,16:18:26.85:240,27,0	./.
chr10	64149758	.	T	TA	2362.29	PASS	AB=0.746;AC=40;AF=0.714;AN=56;BaseQRankSum=-2.198;DP=330;FS=0.000;HRun=13;HaplotypeScore=36.4685;InbreedingCoeff=0.2502;MQ=72.30;MQ0=7;MQRankSum=0.268;QD=9.37;ReadPosRankSum=3.620;VQSLOD=1.8507;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,3:22:23.62:250,24,0	1/1:2,0:2:5.94:41,6,0	0/0:48,0:13:0.71:0,1,14	0/1:34,0:13:3.48:3,0,55	1/1:4,14:20:26.98:332,27,0	1/1:5,5:11:8.17:106,8,0	1/1:3,7:10:6.01:56,6,0	0/0:16,0:18:15.02:0,15,195	1/1:2,3:5:3:28,3,0	1/1:0,4:4:6.01:56,6,0	1/1:0,11:13:20.82:167,21,0	1/1:1,1:2:3:28,3,0	0/0:4,0:5:4.96:0,5,26	0/1:4,7:11:8:72,0,8	1/1:0,9:9:12.01:111,12,0	1/1:3,0:3:2.94:18,3,0	1/1:4,25:29:33.48:453,33,0	1/1:3,12:15:26.87:237,27,0	0/1:11,1:12:11.54:47,0,12	1/1:1,2:4:6.01:55,6,0	1/1:1,6:7:6.01:56,6,0	0/1:1,2:3:14.57:22,0,15	0/0:0,0:1:2.04:0,2,6	0/0:5,0:5:8.84:0,9,58	0/1:2,1:5:11.74:33,0,12	1/1:6,9:15:3.43:169,3,0	0/1:6,4:10:0.75:121,0,1	1/1:1,5:6:6.01:56,6,0
chr10	64153502	.	T	TA	9117.28	PASS	AB=0.571;AC=37;AF=0.661;AN=56;BaseQRankSum=-10.694;DP=496;FS=5.255;HRun=8;HaplotypeScore=46.4149;InbreedingCoeff=0.9251;MQ=81.52;MQ0=0;MQRankSum=-3.625;QD=27.30;ReadPosRankSum=3.590;VQSLOD=5.3425;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:84.03:0,84,769	1/1:0,9:9:27.08:312,27,0	0/0:13,0:13:16.81:0,17,205	0/0:15,0:15:29.99:0,30,273	0/0:14,0:14:42.01:0,42,380	1/1:1,21:22:60.18:692,60,0	1/1:2,17:19:51.15:589,51,0	0/0:19,0:19:48.02:0,48,439	0/0:21,0:21:60.03:0,60,549	1/1:2,17:19:51.15:589,51,0	1/1:3,8:11:24.07:275,24,0	1/1:2,16:18:39.12:450,39,0	0/0:14,0:14:39.02:0,39,357	1/1:1,9:10:27.08:312,27,0	1/1:3,11:14:27.08:312,27,0	1/1:4,13:17:36.11:416,36,0	1/1:3,24:27:38.73:700,39,0	1/1:2,12:14:36.11:415,36,0	1/1:4,22:26:66.15:731,66,0	1/1:3,16:19:42.12:485,42,0	1/1:2,21:23:54.16:623,54,0	1/1:3,18:21:42.12:485,42,0	0/0:14,0:14:36.02:0,36,329	0/0:19,0:19:51.03:0,51,467	0/1:2,6:8:9.41:155,0,9	1/1:3,25:28:75.20:852,75,0	1/1:6,15:20:42.12:485,42,0	1/1:0,8:8:21.06:242,21,0
chr10	64153647	.	GA	G	660.60	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.522;DP=595;FS=2.109;HRun=10;HaplotypeScore=68.1477;InbreedingCoeff=0.6394;MQ=58.23;MQ0=24;MQRankSum=1.969;QD=16.11;ReadPosRankSum=1.961;VQSLOD=4.2109;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,39:41:86.97:755,87,0	0/0:8,0:9:11.87:0,12,114	0/0:29,0:9:18.18:0,18,156	0/0:26,1:9:2.55:0,3,51	0/0:25,0:25:34.33:0,34,575	0/0:24,0:24:48.13:0,48,531	0/0:21,0:21:51.13:0,51,554	0/0:21,0:18:42.57:0,43,450	0/0:22,0:22:45.11:0,45,489	0/0:26,0:24:45.32:0,45,543	0/0:18,0:16:42.10:0,42,455	0/0:18,0:18:39.10:0,39,424	0/0:10,0:10:24.06:0,24,265	0/0:19,1:19:16.05:0,16,397	0/0:19,2:21:5.05:0,5,498	0/0:15,0:15:42.11:0,42,457	0/0:36,1:37:79.19:0,79,1080	0/0:23,1:25:41.77:0,42,602	0/0:23,0:21:50.60:0,51,518	0/0:17,0:17:45.11:0,45,490	0/0:16,0:16:30.06:0,30,311	0/0:21,0:20:45.12:0,45,498	0/0:15,0:15:36.09:0,36,391	0/0:24,1:25:31.10:0,31,570	0/0:18,0:18:42.10:0,42,456	0/0:24,0:23:54.09:0,54,575	0/0:25,1:25:40.12:0,40,669	0/0:1,0:1:3.01:0,3,33
chr10	64154166	.	A	AAAAAG	17713.63	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=3.596;DP=605;FS=1.294;HRun=0;HaplotypeScore=130.1436;InbreedingCoeff=0.9738;MQ=59.22;MQ0=5;MQRankSum=-8.942;QD=44.96;ReadPosRankSum=1.864;VQSLOD=4.8566;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,13:20:10.83:570,11,0	1/1:9,4:13:27.06:493,27,0	0/0:27,0:17:14.64:0,15,202	0/0:33,0:20:12.55:0,13,274	0/0:26,0:26:60.19:0,60,1034	1/1:11,8:19:45.14:1139,45,0	1/1:11,2:13:21.07:493,21,0	0/0:27,0:26:48.13:0,48,784	0/0:27,0:27:66.22:0,66,1194	1/1:4,23:27:68.97:1746,69,0	1/1:8,5:13:33.07:720,33,0	1/1:20,4:24:38.67:885,39,0	0/0:22,0:22:54.17:0,54,958	1/1:12,5:17:30.07:610,30,0	1/1:7,12:19:36.12:906,36,0	1/1:14,7:21:48.12:1115,48,0	1/1:21,6:27:63.22:1582,63,0	1/1:12,1:13:21.05:435,21,0	1/1:16,1:17:23.87:549,24,0	1/1:13,18:32:60.20:1535,60,0	1/1:7,1:8:8.96:189,9,0	1/1:10,7:17:30.06:800,30,0	0/0:26,0:25:62.86:0,63,1044	0/0:22,0:22:54.14:0,54,880	1/1:14,8:22:54.15:1134,54,0	1/1:11,8:19:39.12:969,39,0	1/1:15,22:38:51.03:1244,51,0	1/1:13,2:15:27.08:601,27,0
chr10	64154230	.	AAG	A	5216.50	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=13.409;DP=557;FS=9.262;HRun=0;HaplotypeScore=193.9483;InbreedingCoeff=0.9030;MQ=41.50;MQ0=11;MQRankSum=-7.695;QD=15.12;ReadPosRankSum=4.298;VQSLOD=4.0067;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:7.90:0,8,205	1/1:7,2:9:19.33:141,19,0	0/0:28,0:5:3.01:0,3,46	0/0:38,0:9:12.03:0,12,173	0/0:28,0:28:72.21:0,72,1092	1/1:17,5:21:38.38:275,38,0	1/1:8,3:11:23.19:185,23,0	0/0:20,1:20:5.21:0,5,530	0/0:23,0:23:63.21:0,63,986	1/1:24,5:28:32.41:360,32,0	1/1:10,7:17:5.09:209,5,0	1/1:13,6:19:47.73:373,48,0	0/0:14,1:14:33.03:0,33,457	1/1:11,2:13:25.52:184,26,0	1/1:15,5:20:39.76:318,40,0	1/1:12,4:16:38.67:265,39,0	1/1:18,6:24:41.69:358,42,0	1/1:9,3:12:17.07:143,17,0	1/1:13,0:13:22.94:204,23,0	1/1:24,5:29:42.83:313,43,0	1/1:3,4:7:9.23:86,9,0	1/1:10,7:16:37.30:348,37,0	0/0:23,0:23:51.17:0,51,804	0/0:21,1:22:17.22:0,17,750	1/1:24,7:31:76.87:553,77,0	1/1:14,5:17:40.68:309,41,0	1/1:17,5:21:37.33:330,37,0	1/1:10,5:15:36.45:261,36,0
chr10	64154232	.	G	GGA	13763.14	PASS	AB=0.685;AC=38;AF=0.679;AN=56;BaseQRankSum=13.407;DP=545;FS=10.849;HRun=0;HaplotypeScore=163.8480;InbreedingCoeff=0.8283;MQ=41.64;MQ0=10;MQRankSum=-8.308;QD=39.32;ReadPosRankSum=3.748;VQSLOD=5.8247;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:8,1:12:99:150,0,134	1/1:3,5:8:24:396,24,0	0/0:27,0:5:14.96:0,15,193	0/0:35,0:8:15.04:0,15,215	0/0:27,0:27:75.24:0,75,1172	1/1:8,12:19:50.83:790,51,0	1/1:5,7:12:30.03:516,30,0	0/0:23,0:22:45.08:0,45,802	0/0:23,0:23:69.24:0,69,1107	1/1:14,14:27:81.05:1249,81,0	1/1:12,6:18:33.86:522,34,0	1/1:8,12:20:53.72:796,54,0	0/0:14,0:13:39.13:0,39,615	1/1:5,7:12:35.90:552,36,0	1/1:8,11:19:53.99:883,54,0	1/1:5,11:16:47.88:754,48,0	1/1:11,11:23:47.29:704,47,0	1/1:9,4:13:23.18:308,23,0	0/1:5,8:13:10.10:392,0,10	1/1:14,14:28:71.85:1139,72,0	1/1:7,1:8:8.94:115,9,0	1/1:9,7:15:44.89:639,45,0	0/0:23,0:23:63.21:0,63,978	0/0:23,0:23:66.01:0,66,987	1/1:9,21:30:90:1508,90,0	1/1:7,11:16:44.98:779,45,0	1/1:10,11:20:59.50:894,59,0	1/1:6,9:15:44.77:676,45,0
chr10	64154263	.	AAAGG	A	4756.69	PASS	AB=0.978;AC=41;AF=0.732;AN=56;BaseQRankSum=11.251;DP=457;FS=8.084;HRun=0;HaplotypeScore=177.7836;InbreedingCoeff=0.4478;MQ=46.62;MQ0=4;MQRankSum=-6.442;QD=12.42;ReadPosRankSum=-1.528;VQSLOD=3.2047;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:15,0:15:30.88:31,0,194	1/1:5,0:5:14.95:132,15,0	0/0:11,0:2:4.24:0,4,27	0/0:12,0:4:2.04:0,2,6	0/1:28,0:28:41.54:42,0,621	1/1:19,2:19:35.39:243,35,0	1/1:19,0:19:14.58:101,15,0	0/1:28,0:24:9.96:10,0,311	0/1:19,0:19:60.03:60,0,509	1/1:15,3:18:41.92:386,42,0	1/1:16,0:16:29.45:205,29,0	1/1:17,1:18:40.20:334,40,0	0/0:8,0:7:20.97:0,21,294	1/1:12,0:12:23.89:202,24,0	1/1:12,2:14:38.92:348,39,0	1/1:11,1:12:20.89:178,21,0	1/1:20,1:21:38.69:305,39,0	1/1:15,1:16:2.89:122,3,0	0/1:7,1:8:27.43:65,0,27	1/1:15,2:17:32.75:258,33,0	1/1:10,0:10:14.19:97,14,0	1/1:15,1:15:38.48:270,38,0	0/0:24,0:24:69.11:0,69,1181	0/0:19,0:19:48.09:0,48,860	1/1:21,1:22:53.87:492,54,0	1/1:19,0:17:35.87:310,36,0	1/1:14,1:14:29.86:251,30,0	1/1:14,0:14:37.23:316,37,0
chr10	64154267	.	GAAGGAAGA	G	11930.11	PASS	AB=1.000;AC=40;AF=0.714;AN=56;BaseQRankSum=8.085;DP=458;FS=8.078;HRun=0;HaplotypeScore=182.1817;InbreedingCoeff=0.5586;MQ=47.76;MQ0=3;MQRankSum=-6.753;QD=33.89;ReadPosRankSum=-1.785;VQSLOD=3.2490;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:15,0:15:1.79:2,0,492	1/1:4,2:6:18.05:363,18,0	0/0:10,0:2:1.87:0,2,22	0/0:12,0:5:1.53:0,2,61	0/1:28,0:28:28.36:28,0,1177	1/1:14,5:17:45.07:701,45,0	1/1:5,13:18:3.54:287,4,0	0/0:31,0:28:20.20:0,20,780	0/1:19,0:19:35.95:36,0,914	1/1:11,5:16:42.12:775,42,0	1/1:12,6:19:44.76:707,45,0	1/1:11,9:20:57.11:1021,57,0	0/0:8,0:7:20.99:0,21,592	1/1:9,2:11:27.06:470,27,0	1/1:9,6:15:45.05:836,45,0	1/1:7,3:10:24.01:396,24,0	1/1:17,5:22:48.03:824,48,0	1/1:6,9:15:2.99:244,3,0	0/1:8,0:8:28.47:97,0,28	1/1:11,4:15:36.08:592,36,0	1/1:11,0:11:25.21:357,25,0	1/1:6,10:15:42.14:766,42,0	0/0:26,0:26:75.22:0,75,2320	0/0:18,0:18:46.37:0,46,1341	1/1:16,7:23:66.14:1195,66,0	1/1:14,5:17:42.14:829,42,0	1/1:9,4:12:36.07:653,36,0	1/1:7,7:14:42.03:752,42,0
chr10	64154434	.	A	AT	946.78	PASS	AB=0.938;AC=7;AF=0.125;AN=56;BaseQRankSum=-4.899;DP=427;FS=1.411;HRun=10;HaplotypeScore=48.3464;InbreedingCoeff=0.7917;MQ=56.48;MQ0=4;MQRankSum=1.182;QD=13.92;ReadPosRankSum=-2.736;VQSLOD=2.7664;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:77.06:0,77,619	0/0:6,0:6:17.98:0,18,148	0/0:7,0:7:14.88:0,15,114	0/0:2,0:1:3:0,3,25	1/1:1,12:13:27.07:288,27,0	0/0:14,0:14:22.97:0,23,178	0/0:18,0:17:41.06:0,41,343	1/1:11,23:32:63.09:637,63,0	1/1:0,6:6:15.04:160,15,0	0/0:18,0:18:44.92:0,45,369	0/0:17,0:17:35.93:0,36,296	0/0:16,0:17:34.97:0,35,277	0/0:14,0:14:26.94:0,27,222	0/0:4,0:4:8.99:0,9,74	0/1:14,1:15:2.12:2,0,192	0/0:10,0:10:23.97:0,24,197	0/0:42,0:43:99:0,113,913	0/0:12,0:13:28.99:0,29,227	0/0:17,0:17:26.93:0,27,221	0/0:13,0:13:23.07:0,23,195	0/0:12,0:12:32.96:0,33,271	0/0:9,0:9:8.98:0,9,74	0/0:15,0:15:17.91:0,18,145	0/0:23,0:23:53.93:0,54,443	0/0:11,0:11:17.95:0,18,148	0/0:22,0:20:44.93:0,45,369	0/0:9,0:9:23.97:0,24,196	0/0:9,0:10:26:0,26,203
chr10	64156727	.	ATGTG	A	5575.61	PASS	AB=0.659;AC=33;AF=0.611;AN=54;BaseQRankSum=1.396;DP=440;FS=0.000;HRun=0;HaplotypeScore=84.9840;InbreedingCoeff=0.6776;MQ=60.51;MQ0=5;MQRankSum=0.668;QD=20.42;ReadPosRankSum=2.656;VQSLOD=4.3744;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:22:8.99:0,9,130	1/1:1,2:3:3.01:48,3,0	./.	0/0:18,0:10:5.95:0,6,118	0/0:10,0:17:16.93:0,17,204	1/1:9,9:19:21.06:317,21,0	1/1:10,5:15:15.05:241,15,0	0/0:15,0:19:26.78:0,27,344	0/0:16,0:16:36.08:0,36,720	0/1:8,1:16:28.70:29,0,54	0/0:5,0:13:19.21:0,19,86	1/1:3,7:11:21.07:337,21,0	0/0:8,0:8:21.07:0,21,505	1/1:2,9:12:24.08:365,24,0	1/1:3,11:14:27.09:434,27,0	1/1:5,7:12:18.06:289,18,0	0/1:12,17:29:12.60:584,0,13	0/1:9,8:17:22:268,0,22	1/1:4,12:18:22.07:560,22,0	1/1:5,6:11:6.02:96,6,0	1/1:16,10:25:30.10:482,30,0	1/1:2,8:10:14.90:241,15,0	0/0:6,0:8:11.49:0,11,121	0/0:20,0:20:33.05:0,33,694	1/1:3,10:14:24.08:365,24,0	1/1:9,4:13:14.37:217,14,0	1/1:4,11:15:20.99:337,21,0	1/1:7,10:17:9.09:367,9,0
chr10	64157191	.	A	AT	5299.07	PASS	AB=0.609;AC=35;AF=0.625;AN=56;BaseQRankSum=-7.841;DP=467;FS=0.454;HRun=12;HaplotypeScore=57.5354;InbreedingCoeff=0.5737;MQ=70.62;MQ0=0;MQRankSum=0.489;QD=15.77;ReadPosRankSum=0.042;VQSLOD=5.5827;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,1:30:41.09:220,41,0	1/1:2,6:8:1.63:156,2,0	0/0:9,0:7:1.06:0,1,40	0/0:9,0:9:6.26:0,6,61	0/0:3,0:21:24.40:0,24,71	0/1:3,8:11:0.87:154,0,1	0/1:6,8:14:16.78:177,0,17	0/0:21,0:23:42.93:0,43,294	0/0:12,0:12:25.86:0,26,181	1/1:6,21:27:19.08:482,19,0	0/1:5,15:20:0.56:300,0,1	1/1:2,9:11:21.03:204,21,0	0/0:14,0:16:24.90:0,25,165	1/1:7,11:18:30:282,30,0	1/1:8,16:25:41.79:385,42,0	1/1:2,16:18:11.15:270,11,0	1/1:9,22:31:63.10:613,63,0	1/1:3,10:13:5.13:212,5,0	0/1:7,6:13:19.78:151,0,20	1/1:2,13:15:33:311,33,0	1/1:0,7:7:18.03:175,18,0	1/1:5,6:11:12.44:108,12,0	0/0:19,0:20:37.75:0,38,268	0/0:17,0:17:41.70:0,42,303	1/1:0,7:7:18.03:175,18,0	1/1:6,15:22:36.02:366,36,0	0/1:6,17:23:23.66:279,0,24	1/1:2,9:12:29.88:277,30,0
chr10	64158487	.	T	TA	408.40	PASS	AB=0.910;AC=7;AF=0.125;AN=56;BaseQRankSum=0.790;DP=459;FS=0.665;HRun=12;HaplotypeScore=64.8814;InbreedingCoeff=0.4826;MQ=72.46;MQ0=0;MQRankSum=-0.296;QD=4.75;ReadPosRankSum=-3.283;VQSLOD=0.7777;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:13,2:23:40.08:246,40,0	0/0:5,0:7:13.86:0,14,87	0/1:14,0:15:10.19:10,0,111	0/1:17,0:11:0.46:0,0,50	0/0:29,2:31:39.13:0,39,452	0/0:16,0:16:41.74:0,42,306	0/0:17,0:17:38.75:0,39,284	1/1:11,8:20:13.66:269,14,0	0/0:8,0:8:5.92:0,6,44	0/0:19,1:20:9.49:0,9,232	0/0:17,3:21:11.29:0,11,229	0/1:7,1:8:11.18:11,0,92	0/0:7,0:8:16.92:0,17,115	0/0:21,0:21:29.24:0,29,218	0/0:9,0:9:14.85:0,15,109	0/0:16,0:16:43.77:0,44,312	0/0:25,0:26:61.64:0,62,443	0/0:24,0:24:65.87:0,66,465	0/0:15,2:18:11.55:0,12,225	0/0:18,0:18:20.60:0,21,152	0/0:15,0:15:32.73:0,33,239	0/0:14,1:17:4.68:0,5,179	0/0:10,0:11:19.87:0,20,137	0/0:12,0:12:26.78:0,27,196	0/0:17,0:17:35.72:0,36,260	0/0:18,0:18:32.76:0,33,241	0/0:11,0:11:23.85:0,24,175	0/0:9,0:9:26.85:0,27,197
chr10	64158627	.	CAAAAAAGT	C	325.50	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=3.648;DP=457;FS=16.102;HRun=0;HaplotypeScore=108.1482;InbreedingCoeff=0.6520;MQ=62.60;MQ0=11;MQRankSum=-0.527;QD=7.57;ReadPosRankSum=1.134;VQSLOD=0.5157;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:9,8:17:15.05:413,15,0	0/0:6,0:6:12.01:0,12,403	0/0:32,0:15:34.35:0,34,1267	0/1:26,0:11:6.88:7,0,505	0/0:16,0:16:42.01:0,42,1358	0/0:12,0:12:24.08:0,24,948	0/0:12,0:12:27.05:0,27,953	0/0:22,0:22:39.08:0,39,1202	0/0:14,0:13:36.03:0,36,995	0/0:15,0:15:35.08:0,35,1255	0/0:11,0:11:27.07:0,27,895	0/0:17,0:17:45.12:0,45,1682	0/0:11,0:11:30.01:0,30,1023	0/0:12,0:11:20.99:0,21,690	0/0:17,0:16:32.93:0,33,942	0/0:14,0:14:36.09:0,36,1281	0/0:25,0:24:66.12:0,66,2358	0/0:13,0:13:33.11:0,33,1320	0/0:26,0:25:66.18:0,66,2377	0/0:16,0:16:32.94:0,33,1198	0/0:17,0:17:39.04:0,39,1218	0/0:15,0:14:30.05:0,30,935	0/0:18,0:18:45.11:0,45,1820	0/0:17,0:17:48.08:0,48,1785	0/0:10,0:9:18.49:0,18,610	0/0:16,0:16:45.12:0,45,1740	0/0:15,0:15:38.98:0,39,1173	0/0:14,0:13:30.01:0,30,975
chr10	64160481	.	TTTG	T	1062.27	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.783;DP=641;FS=1.606;HRun=0;HaplotypeScore=129.4332;InbreedingCoeff=0.9810;MQ=65.17;MQ0=2;MQRankSum=0.031;QD=30.35;ReadPosRankSum=0.649;VQSLOD=4.1085;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,30:34:64.57:1157,65,0	0/0:21,0:21:51.14:0,51,933	0/0:18,0:14:16.63:0,17,491	0/0:22,0:20:45.13:0,45,907	0/0:26,0:26:69.24:0,69,1439	0/0:23,0:22:54.19:0,54,1116	0/0:21,0:21:54.19:0,54,1117	0/0:38,0:38:86.66:0,87,1643	0/0:20,0:20:42.14:0,42,861	0/0:21,0:21:60.21:0,60,1235	0/0:24,0:24:66.21:0,66,1285	0/0:17,0:17:48.15:0,48,968	0/0:22,0:22:63.22:0,63,1286	0/0:14,0:14:36.12:0,36,731	0/0:28,0:28:81.28:0,81,1706	0/0:21,0:21:60.19:0,60,1206	0/0:24,0:24:63.19:0,63,1235	0/0:16,0:16:48.16:0,48,954	0/0:22,0:22:60.21:0,60,1202	0/0:29,0:29:84.29:0,84,1732	0/0:18,0:18:45.15:0,45,925	0/0:14,0:14:42.14:0,42,816	0/0:16,0:16:42.13:0,42,845	0/0:28,0:27:78.25:0,78,1582	0/0:21,0:21:18.06:0,18,377	0/0:19,0:19:51.17:0,51,1032	0/0:30,0:29:84.27:0,84,1674	0/0:31,0:31:93.30:0,93,1909
chr10	64160508	.	CCTTT	C	13077.21	PASS	AB=1.000;AC=35;AF=0.625;AN=56;BaseQRankSum=-3.233;DP=653;FS=11.214;HRun=0;HaplotypeScore=125.3185;InbreedingCoeff=0.5891;MQ=61.60;MQ0=3;MQRankSum=2.058;QD=28.93;ReadPosRankSum=8.685;VQSLOD=3.2656;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:34,0:33:47.37:927,47,0	1/1:13,0:13:36.12:583,36,0	0/0:18,0:13:20.65:0,21,232	0/0:31,0:21:20.79:0,21,293	0/0:28,0:28:48.16:0,48,751	0/1:23,0:23:38.73:642,0,39	1/1:22,0:22:36.55:571,37,0	0/0:32,0:31:69.04:0,69,1070	0/0:20,0:20:36.38:0,36,491	1/1:23,0:23:33.44:793,33,0	1/1:23,0:22:57.18:892,57,0	0/1:22,0:20:39.37:575,0,39	0/0:19,0:19:48.16:0,48,920	0/1:11,0:11:12.04:304,0,12	1/1:33,0:33:26.91:1069,27,0	0/1:22,0:22:25.12:679,0,25	1/1:25,0:25:52.96:814,53,0	1/1:17,0:16:6.84:432,7,0	1/1:7,13:20:39.13:609,39,0	1/1:35,0:34:79.43:1173,79,0	1/1:11,0:11:24.01:333,24,0	1/1:16,0:16:9.71:357,10,0	0/0:20,0:20:41.17:0,41,685	0/0:33,0:32:68.22:0,68,1154	1/1:4,15:19:6.02:84,6,0	0/1:25,0:25:33.23:541,0,33	1/1:28,0:27:26.05:761,26,0	1/1:30,0:30:45.70:939,46,0
chr10	64160519	.	T	TTC	3091.78	PASS	AB=0.991;AC=28;AF=0.500;AN=56;BaseQRankSum=6.127;DP=656;FS=29.633;HRun=0;HaplotypeScore=143.0869;InbreedingCoeff=0.1964;MQ=58.09;MQ0=16;MQRankSum=3.644;QD=6.63;ReadPosRankSum=7.231;VQSLOD=1.3369;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:35,0:33:16.98:63,0,17	1/1:13,1:14:19.49:138,19,0	0/0:10,0:8:21.54:0,22,285	0/1:21,0:12:3:3,0,220	0/0:26,0:26:48.16:0,48,682	1/1:21,5:26:47.07:581,47,0	0/1:22,0:21:15.06:88,0,15	0/0:34,0:32:90.24:0,90,1190	0/0:21,0:21:39.12:0,39,529	0/1:23,2:25:0.47:175,0,0	0/1:25,1:25:4.22:156,0,4	1/1:21,1:20:6.26:125,6,0	0/0:20,0:20:54.17:0,54,746	0/1:14,0:11:7.89:38,0,8	1/1:28,2:30:42.10:275,42,0	0/1:22,0:21:23.96:187,0,24	1/1:28,0:28:5:124,5,0	1/1:16,0:14:0.17:183,0,0	0/1:15,0:14:8.59:192,0,9	1/1:37,0:33:26.72:224,27,0	0/1:9,0:9:4.86:54,0,5	0/1:17,0:16:8.64:66,0,9	0/0:24,0:24:39.92:0,40,568	0/0:35,0:34:68.55:0,69,899	0/0:20,0:20:11.45:0,11,95	0/1:30,0:28:82.40:228,0,82	1/1:24,1:24:24.45:288,24,0	0/1:32,0:30:55.47:84,0,55
chr10	64160523	.	TTC	T	2399.79	PASS	AB=0.930;AC=28;AF=0.500;AN=56;BaseQRankSum=6.983;DP=650;FS=0.735;HRun=0;HaplotypeScore=143.5056;InbreedingCoeff=0.2891;MQ=58.01;MQ0=16;MQRankSum=2.288;QD=5.49;ReadPosRankSum=2.625;VQSLOD=2.9668;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:30,4:32:11.73:232,12,0	1/1:13,1:14:21.82:103,22,0	0/0:9,0:7:17.62:0,18,224	0/0:19,0:10:12.56:0,13,181	0/0:26,0:26:40.92:0,41,672	1/1:26,1:27:18.05:233,18,0	0/1:18,1:18:23.08:23,0,44	0/0:38,0:36:90.18:0,90,1245	0/0:21,0:21:3.11:0,3,380	1/1:19,3:22:35.45:234,35,0	1/1:23,4:26:36.53:266,37,0	1/1:21,0:19:12.44:74,12,0	0/0:23,0:23:66.22:0,66,1051	0/1:12,1:10:0.30:32,0,0	1/1:27,3:30:48.73:265,49,0	0/1:20,2:21:11.73:145,0,12	0/1:27,1:28:37.96:45,0,38	1/1:16,1:15:18.06:121,18,0	0/1:17,0:16:35.79:36,0,50	0/1:35,3:34:12.44:89,0,12	0/1:8,0:8:7.90:8,0,16	0/1:13,4:16:17.14:136,0,17	0/0:25,0:25:59.80:0,60,716	0/0:32,1:32:25.69:0,26,855	0/0:19,0:19:8.38:0,8,141	0/1:22,7:27:16.01:281,0,16	0/1:24,0:23:32.86:57,0,33	1/1:25,5:28:11.38:214,11,0
chr10	64160525	.	C	CTCTT	2352.12	PASS	AB=0.703;AC=39;AF=0.813;AN=48;BaseQRankSum=3.610;DP=647;FS=7.562;HRun=0;HaplotypeScore=168.1008;InbreedingCoeff=0.3949;MQ=56.42;MQ0=16;MQRankSum=-1.378;QD=4.55;ReadPosRankSum=1.232;VQSLOD=2.2575;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:34,0:34:20.98:127,21,0	1/1:13,0:14:6:81,6,0	./.	./.	1/1:11,0:26:4.05:13,4,0	1/1:21,0:26:36.07:616,36,0	1/1:16,0:16:5.74:37,6,0	./.	0/0:9,0:21:7.43:0,7,47	1/1:21,0:24:20.29:191,20,0	1/1:24,0:25:10.01:76,10,0	0/1:15,0:20:11.38:94,0,11	0/0:23,0:23:36.12:0,36,533	1/1:10,0:10:7.69:45,8,0	1/1:28,0:30:20.69:201,21,0	1/1:22,0:22:13.44:97,13,0	1/1:21,0:27:6.47:41,6,0	1/1:17,0:15:12.37:140,12,0	1/1:17,0:17:3:29,3,0	1/1:34,0:34:13.49:101,13,0	./.	1/1:17,0:17:12.08:106,12,0	0/1:11,14:26:38.88:65,0,39	0/1:20,12:32:35.13:139,0,35	0/0:20,0:20:15.02:0,15,190	1/1:27,0:27:17.12:125,17,0	1/1:24,0:24:12.45:123,12,0	1/1:29,0:27:6:54,6,0
chr10	64161811	.	C	CT	10613.05	PASS	AB=0.778;AC=44;AF=0.786;AN=56;BaseQRankSum=-5.985;DP=592;FS=0.992;HRun=10;HaplotypeScore=75.1885;InbreedingCoeff=0.8154;MQ=72.76;MQ0=1;MQRankSum=-0.745;QD=22.16;ReadPosRankSum=0.768;VQSLOD=5.6622;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:22.11:0,22,51	0/1:4,16:20:7.18:342,0,7	0/1:13,0:11:1.77:2,0,67	0/0:24,0:22:18.03:0,18,151	1/1:3,16:19:52.78:530,53,0	1/1:2,17:20:48.03:489,48,0	1/1:2,23:25:51.13:544,51,0	1/1:10,20:31:19.74:605,20,0	1/1:4,14:18:45.11:473,45,0	1/1:4,28:34:86.81:857,87,0	1/1:3,9:12:6.32:266,6,0	1/1:2,17:19:39.10:416,39,0	0/0:17,1:18:10:0,10,288	1/1:0,13:13:27.07:288,27,0	1/1:4,28:32:72.18:768,72,0	1/1:2,20:22:29.49:519,29,0	1/1:5,21:26:45.11:480,45,0	1/1:3,12:15:30.08:320,30,0	1/1:0,14:14:42.07:436,42,0	1/1:0,15:15:45.03:455,45,0	1/1:1,21:23:62.99:654,63,0	1/1:7,17:24:24.34:445,24,0	0/0:20,0:20:56.91:0,57,465	0/0:20,1:21:21.93:0,22,383	1/1:4,17:21:36.09:384,36,0	1/1:5,19:25:35.38:565,35,0	1/1:5,20:24:20.47:424,20,0	1/1:2,11:13:33.08:352,33,0
chr10	64161819	.	TTTG	T	1008.52	PASS	AB=1.000;AC=10;AF=0.179;AN=56;BaseQRankSum=-8.306;DP=606;FS=9.319;HRun=0;HaplotypeScore=131.3355;InbreedingCoeff=0.0113;MQ=69.77;MQ0=1;MQRankSum=0.894;QD=5.23;ReadPosRankSum=-5.808;VQSLOD=-0.7597;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:4,23:27:51.16:765,51,0	0/1:20,0:20:27.55:28,0,490	0/0:15,0:12:25.61:0,26,335	0/0:28,0:24:41.67:0,42,532	0/0:22,0:22:24.44:0,24,689	0/0:22,0:22:57.13:0,57,722	0/0:27,0:27:25.32:0,25,675	0/0:30,0:30:4.36:0,4,703	0/1:16,0:16:21.87:22,0,418	0/1:34,0:34:74.73:75,0,857	0/0:13,0:13:31.68:0,32,439	0/0:20,0:20:16.31:0,16,574	0/0:16,0:16:37.23:0,37,761	0/0:13,0:13:27.09:0,27,354	0/0:31,0:31:9.62:0,10,836	0/0:22,0:22:16.62:0,17,675	0/0:26,0:26:47.84:0,48,580	0/1:13,0:13:7.44:7,0,351	0/1:16,0:16:99:100,0,356	0/0:16,0:16:15.98:0,16,519	0/0:27,0:27:14.51:0,15,803	0/1:21,0:21:99:109,0,375	0/0:24,0:24:69.15:0,69,1150	0/0:21,0:21:60.08:0,60,1110	0/1:20,0:20:21.58:22,0,432	0/1:26,0:26:30.34:30,0,724	0/0:26,0:25:18.35:0,18,580	0/0:14,0:14:41.91:0,42,545
chr10	64163307	.	C	CT	586.35	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-0.827;DP=601;FS=11.358;HRun=1;HaplotypeScore=74.3699;InbreedingCoeff=0.9377;MQ=66.21;MQ0=0;MQRankSum=-1.906;QD=22.55;ReadPosRankSum=-0.738;VQSLOD=2.3233;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,153,1969	0/0:3,0:3:9.03:0,9,117	0/0:25,0:25:64.46:0,64,818	0/0:35,0:31:83.64:0,84,1003	0/0:22,0:22:32.87:0,33,427	0/0:22,0:22:45.13:0,45,568	0/0:24,0:24:69.22:0,69,894	0/0:27,0:27:72.22:0,72,909	0/0:32,0:32:87.28:0,87,1129	1/1:1,15:16:36.12:523,36,0	1/1:2,8:10:12.04:180,12,0	0/0:26,0:26:69.22:0,69,894	0/0:18,0:18:45.15:0,45,581	0/0:19,0:19:54.18:0,54,701	0/0:26,0:26:72.22:0,72,919	0/0:14,0:14:24.08:0,24,311	0/0:23,0:23:69.22:0,69,896	0/0:19,0:19:57.19:0,57,740	0/0:18,0:18:51.16:0,51,642	0/0:9,0:9:27.09:0,27,346	0/0:44,0:44:99:0,132,1685	0/0:7,0:7:15.05:0,15,195	0/0:10,0:10:18.05:0,18,219	0/0:19,0:19:51.17:0,51,659	0/0:19,0:19:45.15:0,45,584	0/0:27,0:27:75.24:0,75,972	0/0:23,0:23:57.14:0,57,720	0/0:10,0:10:18.06:0,18,234
chr10	64163494	.	CCCACCCAT	C	1095.66	PASS	AB=0.972;AC=22;AF=0.478;AN=46;BaseQRankSum=2.537;DP=389;FS=48.774;HRun=0;HaplotypeScore=70.1621;InbreedingCoeff=0.2282;MQ=39.29;MQ0=64;MQRankSum=-2.766;QD=5.74;ReadPosRankSum=0.327;VQSLOD=-0.3078;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:28:30.07:0,30,486	1/1:3,0:2:3:25,3,0	./.	./.	0/0:13,0:10:8.86:0,9,110	0/1:19,0:15:13.53:174,0,14	0/1:18,0:15:46.75:111,0,47	0/0:28,0:21:6.02:0,6,83	0/0:12,0:10:21.04:0,21,321	0/0:10,0:5:0:0,0,0	0/0:3,0:3:0.47:0,0,1	1/1:19,0:13:21.01:220,21,0	0/0:14,0:11:18.04:0,18,358	0/1:16,1:14:70.51:106,0,71	1/1:8,6:11:6.02:131,6,0	1/1:8,0:5:3.01:50,3,0	./.	1/1:15,0:9:7.24:60,7,0	./.	./.	0/1:52,0:38:71.88:72,0,111	1/1:5,0:4:3:25,3,0	0/0:9,0:6:17.99:0,18,321	0/0:24,0:21:48.13:0,48,1338	1/1:3,0:3:1.25:3,1,0	1/1:6,0:6:5.97:47,6,0	0/1:7,1:6:18.91:150,0,19	0/1:3,0:3:28.77:70,0,29
chr10	64163546	.	C	CCCAT	227.58	PASS	AB=1.000;AC=15;AF=0.357;AN=42;BaseQRankSum=3.987;DP=526;FS=9.071;HRun=0;HaplotypeScore=86.7918;InbreedingCoeff=0.2564;MQ=33.58;MQ0=119;MQRankSum=-1.798;QD=0.98;ReadPosRankSum=-1.926;VQSLOD=0.6747;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:41,0:32:9.82:69,10,0	./.	./.	./.	1/1:10,7:14:8.89:72,9,0	0/0:22,0:17:5.96:0,6,48	0/1:28,0:20:8.97:9,0,40	0/1:30,0:18:0:0,0,0	0/0:22,0:17:33.04:0,33,413	1/1:23,0:9:2.97:20,3,0	0/1:10,0:6:0:0,0,0	0/1:20,0:13:0.01:0,0,0	0/0:15,0:10:15.02:0,15,185	./.	0/0:18,0:11:2.99:0,3,24	./.	0/0:18,0:14:1.69:0,2,22	0/1:18,0:14:7.02:74,0,7	1/1:15,0:9:3.01:31,3,0	0/0:9,0:6:3.88:0,4,26	0/0:68,0:40:11.63:0,12,95	0/0:13,0:7:0.52:0,1,2	0/0:16,0:10:3.01:0,3,46	0/0:32,0:25:36.04:0,36,478	0/1:18,0:10:15:66,0,15	0/1:11,0:7:9.70:10,0,20	./.	./.
chr10	64163693	.	A	AGTT	14791.28	PASS	AC=44;AF=0.815;AN=54;BaseQRankSum=-8.014;DP=347;FS=10.261;HRun=0;HaplotypeScore=38.2716;InbreedingCoeff=0.9457;MQ=66.87;MQ0=1;MQRankSum=-1.263;QD=50.83;ReadPosRankSum=3.151;VQSLOD=6.1798;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,22:23:45.15:1007,45,0	1/1:0,5:5:12.04:269,12,0	0/0:8,0:6:15.03:0,15,207	0/0:13,0:10:18.03:0,18,272	1/1:6,17:24:48.08:1009,48,0	1/1:0,11:11:27.05:559,27,0	1/1:1,12:13:30.10:674,30,0	1/1:3,23:25:69.19:1380,69,0	1/1:2,11:14:30.10:672,30,0	1/1:1,11:12:36.12:759,36,0	1/1:2,14:15:39.09:828,39,0	1/1:0,7:8:18.06:404,18,0	0/0:11,0:11:30.10:0,30,500	1/1:0,7:7:21.07:471,21,0	1/1:0,6:6:12.04:269,12,0	1/1:0,8:8:18.06:404,18,0	1/1:2,18:21:51.17:1112,51,0	1/1:1,20:21:51.18:1141,51,0	1/1:1,14:15:42.13:862,42,0	1/1:1,5:5:12.04:270,12,0	1/1:0,8:7:18.06:390,18,0	./.	0/0:9,0:9:27.07:0,27,400	0/0:14,0:14:42.11:0,42,622	1/1:3,4:6:12.04:269,12,0	1/1:0,11:11:33.09:696,33,0	1/1:2,20:22:50.92:1144,51,0	1/1:0,5:5:9.03:202,9,0
chr10	64164188	.	T	TACACACGCACAC	4966.98	PASS	AB=1.000;AC=26;AF=0.464;AN=56;BaseQRankSum=6.587;DP=662;FS=12.349;HRun=0;HaplotypeScore=281.3328;InbreedingCoeff=-0.2524;MQ=58.51;MQ0=2;MQRankSum=-3.525;QD=9.32;ReadPosRankSum=-6.123;VQSLOD=0.6810;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:37,0:37:0:0,0,0	0/1:7,0:7:0:0,0,0	0/1:29,0:16:0:0,0,0	0/0:28,0:22:0.06:0,0,123	1/1:5,9:20:3.01:175,3,0	0/1:23,0:23:65.41:90,0,65	0/1:29,0:28:25.35:434,0,25	1/1:23,0:23:27.11:358,27,0	1/1:23,0:23:3.01:158,3,0	0/1:27,0:27:99:585,0,240	0/0:16,0:16:3.36:0,3,33	0/1:37,0:37:91.64:534,0,92	0/0:19,0:19:45.04:0,45,931	0/1:26,0:26:37.14:144,0,37	1/1:20,0:20:12:150,12,0	0/1:24,0:24:45.62:269,0,46	0/1:37,0:37:99:353,0,172	0/1:25,0:25:85.93:698,0,86	0/1:16,0:16:37.40:151,0,37	0/1:18,0:18:9.60:10,0,77	0/1:50,0:50:62.55:63,0,151	0/0:19,0:19:10.40:0,10,59	0/0:7,0:7:15.05:0,15,435	0/0:39,0:39:60.18:0,60,1635	0/1:18,0:18:21.90:193,0,22	0/1:20,0:20:99:243,0,125	0/1:17,0:17:35.16:349,0,35	0/1:7,0:6:8.86:9,0,65
chr10	64164199	.	A	ACACACACGCACACACACACG	8051.22	PASS	AB=0.997;AC=27;AF=0.482;AN=56;BaseQRankSum=1.442;DP=649;FS=7.658;HRun=0;HaplotypeScore=334.8656;InbreedingCoeff=-0.3859;MQ=49.85;MQ0=2;MQRankSum=-2.320;QD=15.48;ReadPosRankSum=-4.732;VQSLOD=1.7284;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:2.43:0,2,16	1/1:8,0:8:4.04:39,4,0	0/1:25,0:12:0:0,0,0	0/0:24,0:15:11.75:0,12,231	0/1:19,0:19:36.39:101,0,36	0/1:26,0:26:52.86:248,0,53	0/1:28,0:27:17.15:494,0,17	1/1:19,0:19:20.11:352,20,0	1/1:6,22:31:2.66:280,3,0	0/1:25,0:25:99:907,0,231	0/1:14,0:15:25.60:60,0,26	0/1:36,0:36:82.61:930,0,83	0/0:21,0:21:51.09:0,51,1444	0/1:26,0:26:25.10:331,0,25	1/1:22,0:22:21.04:288,21,0	0/1:24,0:24:36.06:704,0,36	0/1:35,0:35:99:464,0,155	0/1:24,0:24:78.27:1025,0,78	0/1:18,0:18:27.94:233,0,28	0/1:12,0:12:51:51,0,75	0/1:52,0:52:99:264,0,136	0/1:18,0:18:34.85:35,0,47	0/0:9,0:9:24.06:0,24,728	0/0:42,0:42:84.29:0,84,2788	0/1:16,0:16:18.89:342,0,19	0/1:18,0:18:99:386,0,122	0/1:17,0:16:32.17:492,0,32	0/1:6,0:5:25.70:26,0,65
chr10	64164207	.	G	GCACA	465.82	PASS	AB=1.000;AC=14;AF=0.250;AN=56;BaseQRankSum=0.633;DP=636;FS=1.344;HRun=0;HaplotypeScore=192.4169;InbreedingCoeff=0.0222;MQ=46.45;MQ0=3;MQRankSum=0.757;QD=1.65;ReadPosRankSum=-2.604;VQSLOD=2.4697;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,26:35:2.80:13,3,0	0/0:9,0:9:9:0,9,110	0/0:18,0:10:11.90:0,12,94	0/0:22,0:13:16.63:0,17,323	0/1:17,0:17:57.37:57,0,62	0/0:25,0:25:8.32:0,8,249	0/1:28,0:27:29.52:30,0,228	1/1:20,0:20:13:367,13,0	0/1:28,0:28:34.96:45,0,35	0/0:28,0:27:64.70:0,65,639	0/0:16,0:16:12:0,12,159	0/0:36,0:36:16.96:0,17,353	0/0:23,0:23:57.09:0,57,867	0/0:26,0:26:33.01:0,33,345	0/1:22,0:22:49.06:49,0,159	0/0:22,0:22:4.91:0,5,281	0/0:37,0:37:25.92:0,26,400	0/1:23,0:23:5.60:6,0,381	0/1:17,0:16:9.21:9,0,240	0/1:11,0:11:0.16:0,0,148	0/1:51,0:51:28.51:29,0,527	0/0:18,0:18:16.85:0,17,133	0/0:10,0:10:24.02:0,24,412	0/0:39,0:39:93.30:0,93,1584	0/0:18,0:18:15:0,15,158	0/1:19,0:19:5.83:6,0,270	0/1:12,0:11:0.22:0,0,179	0/0:6,0:5:8.86:0,9,88
chr10	64164211	.	ACACG	A	825.65	PASS	AB=1.000;AC=6;AF=0.107;AN=56;BaseQRankSum=-2.175;DP=631;FS=0.000;HRun=0;HaplotypeScore=185.5662;InbreedingCoeff=0.2577;MQ=46.55;MQ0=3;MQRankSum=0.923;QD=7.12;ReadPosRankSum=-5.453;VQSLOD=1.0685;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:8.02:0,8,80	0/0:10,0:10:12:0,12,191	0/0:16,0:8:12.04:0,12,231	0/0:20,0:12:18.12:0,18,590	0/0:16,0:16:12.02:0,12,223	0/0:27,0:27:14.24:0,14,382	0/0:30,0:29:1.92:0,2,581	1/1:0,21:21:60.11:906,60,0	0/0:26,0:26:8.89:0,9,184	0/0:26,0:25:67.84:0,68,1053	0/0:17,1:18:16.43:0,16,282	0/0:36,0:36:42.90:0,43,677	0/0:24,0:24:69.14:0,69,1377	0/0:27,0:27:36.02:0,36,428	0/1:22,0:22:3.93:4,0,240	0/0:24,0:24:10.86:0,11,494	0/0:37,0:37:31.64:0,32,730	0/0:22,0:22:23.89:0,24,619	0/0:15,0:14:9.91:0,10,440	0/1:11,0:11:0.99:1,0,276	0/1:51,0:51:22.39:22,0,840	0/0:18,0:18:19.89:0,20,279	0/0:10,0:10:24.08:0,24,608	0/0:35,0:35:96.29:0,96,2358	0/0:18,0:18:15.03:0,15,279	0/0:19,0:19:47.70:0,48,716	0/1:11,0:10:0.16:0,0,252	0/0:5,0:4:11.87:0,12,165
chr10	64164213	.	ACG	A	468.11	PASS	AB=0.973;AC=9;AF=0.161;AN=56;BaseQRankSum=-0.430;DP=631;FS=6.901;HRun=0;HaplotypeScore=171.5295;InbreedingCoeff=0.0689;MQ=47.64;MQ0=2;MQRankSum=0.188;QD=2.18;ReadPosRankSum=-5.560;VQSLOD=-0.1944;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:11.01:0,11,78	0/0:10,0:10:12:0,12,190	0/0:15,0:8:14.09:0,14,188	0/0:20,0:12:21.10:0,21,499	0/0:15,0:15:11.77:0,12,158	0/0:27,1:28:17.66:0,18,423	0/1:30,1:30:84.65:85,0,549	1/1:21,0:21:57.36:406,57,0	0/0:27,0:27:11.98:0,12,163	0/0:27,0:26:46.02:0,46,903	0/0:17,0:17:16.93:0,17,244	0/0:35,1:36:27.04:0,27,586	0/0:24,0:24:69.08:0,69,1064	0/0:27,0:27:36.07:0,36,536	0/1:20,2:22:24.86:25,0,260	0/1:24,0:24:9.87:10,0,439	0/1:34,2:36:11.84:12,0,584	0/0:22,0:22:9.40:0,9,546	0/0:15,0:14:24:0,24,386	0/0:12,0:12:2.01:0,2,241	0/1:51,1:52:59.06:59,0,718	0/0:17,1:18:19.78:0,20,230	0/0:10,0:10:24.03:0,24,422	0/0:35,0:35:96.20:0,96,1701	0/1:18,0:18:7.09:7,0,227	0/0:21,0:21:52.55:0,53,601	0/1:11,0:10:0.09:0,0,261	0/0:5,0:4:12.03:0,12,141
chr10	64167919	.	C	CCTT	10934.59	PASS	AB=0.556;AC=45;AF=0.804;AN=56;BaseQRankSum=-1.537;DP=339;FS=11.719;HRun=0;HaplotypeScore=140.3618;InbreedingCoeff=0.7450;MQ=43.77;MQ0=5;MQRankSum=-5.001;QD=41.58;ReadPosRankSum=1.666;VQSLOD=5.9702;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,2:7:5.98:86,6,0	1/1:3,4:7:12.04:264,12,0	0/0:21,0:13:30.10:0,30,472	0/0:25,0:12:23.95:0,24,343	1/1:6,20:26:53.97:958,54,0	1/1:1,11:11:27.05:548,27,0	1/1:5,7:11:20.95:312,21,0	1/1:5,13:18:42.14:926,42,0	1/1:1,3:4:9.03:187,9,0	1/1:6,15:21:54.14:1130,54,0	1/1:6,19:25:45.02:852,45,0	1/1:0,3:3:6.02:132,6,0	0/0:5,0:5:15.05:0,15,238	1/1:2,6:8:18.06:396,18,0	1/1:0,1:1:3.01:66,3,0	1/1:0,2:2:6.02:132,6,0	0/1:1,4:5:1.58:140,0,2	1/1:1,4:5:15.05:309,15,0	1/1:3,2:5:9.03:177,9,0	1/1:9,16:25:39.05:766,39,0	1/1:4,7:11:6.60:194,7,0	1/1:2,12:14:33.07:670,33,0	0/0:19,0:19:30.10:0,30,481	0/0:6,0:5:5.98:0,6,96	1/1:4,19:23:42.14:925,42,0	1/1:1,14:15:42.14:925,42,0	1/1:2,9:11:30.10:640,30,0	1/1:0,3:3:9.03:198,9,0
chr10	64167923	.	C	CT	2405.06	PASS	AB=0.958;AC=41;AF=0.732;AN=56;BaseQRankSum=7.255;DP=331;FS=2.065;HRun=2;HaplotypeScore=149.9007;InbreedingCoeff=0.3993;MQ=43.49;MQ0=5;MQRankSum=-4.731;QD=9.62;ReadPosRankSum=3.130;VQSLOD=1.8184;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,1:6:5.77:33,6,0	1/1:5,1:6:11.51:65,12,0	0/0:25,0:13:30.10:0,30,389	0/0:26,0:11:11.58:0,12,260	0/1:24,2:26:46.31:235,0,46	0/1:12,0:11:5.40:93,0,5	0/1:9,1:9:14.45:98,0,14	1/1:17,0:17:6.93:191,7,0	0/1:4,0:4:20.04:20,0,26	0/1:19,0:20:55.78:197,0,56	1/1:22,1:23:8.88:182,9,0	1/1:3,0:3:5.81:34,6,0	0/0:5,0:5:15.05:0,15,194	1/1:7,1:8:20.22:108,20,0	1/1:1,0:1:2.84:14,3,0	1/1:2,0:2:5.68:29,6,0	1/1:4,0:5:7.04:46,7,0	1/1:4,1:5:14.53:108,15,0	1/1:2,1:3:8.69:73,9,0	1/1:18,5:23:37.24:196,37,0	1/1:9,1:10:6.40:39,6,0	1/1:13,0:13:31.55:173,32,0	0/0:19,0:19:33.11:0,33,427	0/0:5,0:4:6:0,6,78	1/1:21,2:23:39.77:201,40,0	1/1:15,0:15:42.78:233,43,0	1/1:11,1:12:28.68:173,29,0	1/1:3,0:3:8.52:42,9,0
chr10	64167930	.	C	CA	9398.67	PASS	AB=0.778;AC=53;AF=0.946;AN=56;BaseQRankSum=-1.489;DP=358;FS=4.289;HRun=0;HaplotypeScore=121.9690;InbreedingCoeff=-0.0905;MQ=42.14;MQ0=16;MQRankSum=0.817;QD=26.25;ReadPosRankSum=1.815;VQSLOD=5.3333;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,3:8:5.95:66,6,0	1/1:1,3:4:12.04:180,12,0	0/1:30,10:15:39.84:399,0,40	0/1:28,5:9:6.24:264,0,6	1/1:5,18:23:48.16:763,48,0	1/1:2,10:11:29.89:472,30,0	1/1:3,7:10:15.01:229,15,0	1/1:5,14:19:41.72:670,42,0	1/1:1,3:4:9.03:143,9,0	1/1:3,18:21:57.16:881,57,0	1/1:4,20:24:38.92:619,39,0	1/1:2,2:4:6.02:93,6,0	1/1:1,5:6:15.05:238,15,0	1/1:0,6:6:18.06:286,18,0	1/1:2,1:2:3.01:48,3,0	1/1:1,2:2:6.02:95,6,0	0/1:4,4:6:10.48:87,0,10	1/1:2,4:5:12.04:182,12,0	1/1:3,2:4:6.02:95,6,0	1/1:2,17:19:36.07:544,36,0	1/1:0,7:7:9:143,9,0	1/1:2,11:12:29.98:406,30,0	1/1:1,17:17:33.03:495,33,0	1/1:1,5:5:6.02:95,6,0	1/1:2,19:21:45.15:716,45,0	1/1:2,13:14:39.13:613,39,0	1/1:5,10:15:12.32:433,12,0	1/1:1,3:4:9.03:143,9,0
chr10	64168058	.	A	AC	12852.29	PASS	AB=1.000;AC=54;AF=0.964;AN=56;BaseQRankSum=1.023;DP=392;FS=0.000;HRun=6;HaplotypeScore=119.6050;InbreedingCoeff=-0.0234;MQ=42.79;MQ0=0;MQRankSum=-2.580;QD=32.79;ReadPosRankSum=2.639;VQSLOD=3.1772;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,15:17:36.12:536,36,0	1/1:1,8:9:27:344,27,0	0/1:9,0:9:2.16:95,0,2	0/1:6,0:6:1.22:70,0,1	1/1:3,20:23:42.14:598,42,0	1/1:0,11:11:30.10:445,30,0	1/1:0,13:13:33.11:490,33,0	1/1:5,10:13:27.05:376,27,0	1/1:3,11:14:27.05:375,27,0	1/1:2,15:17:48.16:716,48,0	1/1:3,9:12:30.10:423,30,0	1/1:0,9:9:24.08:355,24,0	1/1:0,18:18:39.13:580,39,0	1/1:1,20:21:48.16:711,48,0	1/1:0,17:17:33.11:489,33,0	1/1:1,14:15:30.10:445,30,0	1/1:1,8:9:15.05:213,15,0	1/1:0,8:8:21.07:303,21,0	1/1:2,9:11:24.08:358,24,0	1/1:0,22:22:63.21:934,63,0	1/1:1,6:7:15.01:199,15,0	1/1:2,18:20:45.15:668,45,0	1/1:1,18:19:36.12:536,36,0	1/1:2,15:17:42.10:601,42,0	1/1:1,11:11:30.10:446,30,0	1/1:1,14:15:39.13:576,39,0	1/1:3,13:16:36.12:532,36,0	1/1:0,10:10:30.10:439,30,0
chr10	64232844	.	TGTCACGA	T	1435.26	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.849;DP=727;FS=25.898;HRun=0;HaplotypeScore=181.6179;InbreedingCoeff=0.9955;MQ=76.43;MQ0=0;MQRankSum=-7.394;QD=37.77;ReadPosRankSum=0.600;VQSLOD=1.8104;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,30:38:60.21:1530,60,0	0/0:11,0:11:33.11:0,33,1296	0/0:15,0:15:45.13:0,45,1441	0/0:17,0:17:51.17:0,51,1711	0/0:28,0:28:51.18:0,51,2046	0/0:19,0:19:57.20:0,57,2210	0/0:27,0:27:78.27:0,78,3033	0/0:42,0:42:99:0,120,4478	0/0:28,0:28:84.29:0,84,3302	0/0:25,0:25:72.25:0,72,2717	0/0:25,0:25:57.20:0,57,2239	0/0:29,0:29:84.29:0,84,3280	0/0:20,0:20:57.20:0,57,2230	0/0:17,0:17:51.18:0,51,1969	0/0:35,0:35:99:0,102,3853	0/0:28,0:28:78.27:0,78,2956	0/0:30,0:30:90.29:0,90,3270	0/0:38,0:38:99:0,108,4059	0/0:29,0:29:81.28:0,81,3014	0/0:10,0:10:21.03:0,21,746	0/0:56,0:56:99:0,157,5945	0/0:15,0:15:36.12:0,36,1389	0/0:16,0:16:45.15:0,45,1660	0/0:28,0:28:84.27:0,84,3268	0/0:16,0:16:45.14:0,45,1625	0/0:32,0:32:93.31:0,93,3494	0/0:25,0:25:75.26:0,75,2853	0/0:28,0:28:84.29:0,84,3123
chr10	64233431	.	T	TAC	6648.72	PASS	AB=0.686;AC=27;AF=0.519;AN=52;BaseQRankSum=-10.342;DP=837;FS=0.457;HRun=0;HaplotypeScore=117.8711;InbreedingCoeff=-0.0007;MQ=66.39;MQ0=12;MQRankSum=1.581;QD=11.94;ReadPosRankSum=1.402;VQSLOD=4.6773;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:49:45.76:0,46,251	1/1:7,5:13:3.01:45,3,0	./.	./.	0/1:8,11:20:33.48:355,0,33	0/1:10,10:20:34.99:163,0,35	0/1:16,14:31:7.90:334,0,8	0/0:33,0:33:26.85:0,27,225	0/0:11,0:28:28.07:0,28,139	1/1:19,14:33:44.43:525,44,0	1/1:17,9:26:18.06:262,18,0	0/1:14,12:27:30.45:417,0,30	0/0:20,0:23:38.64:0,39,356	1/1:10,11:21:1.75:253,2,0	0/1:20,11:33:0.21:401,0,0	0/1:12,9:21:59.01:287,0,59	0/1:21,12:34:14.17:583,0,14	0/1:14,19:33:48.42:570,0,48	0/1:19,6:27:12.32:176,0,12	1/1:18,12:31:21.05:317,21,0	0/1:37,32:73:99:532,0,111	0/1:13,10:23:56.40:202,0,56	0/0:28,0:28:24.03:0,24,248	0/0:35,0:37:50.88:0,51,501	0/1:9,11:20:12.19:251,0,12	1/1:12,12:25:29.93:418,30,0	1/1:16,10:27:27.56:396,28,0	0/1:9,7:17:29.31:163,0,29
chr10	64233760	.	GA	G	4443.76	PASS	AB=0.662;AC=43;AF=0.768;AN=56;BaseQRankSum=0.922;DP=630;FS=6.444;HRun=14;HaplotypeScore=84.8947;InbreedingCoeff=0.4687;MQ=71.78;MQ0=5;MQRankSum=0.791;QD=8.42;ReadPosRankSum=4.957;VQSLOD=4.1477;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:8,23:36:1.05:309,0,1	1/1:3,7:10:14.82:103,15,0	0/0:32,0:20:21.16:0,21,172	0/0:20,1:15:14.74:0,15,111	1/1:9,13:26:42.34:257,42,0	1/1:3,14:20:41.81:264,42,0	1/1:2,12:16:33.83:217,34,0	1/1:7,0:28:42.26:138,42,0	1/1:6,0:22:24.20:70,24,0	1/1:10,14:28:37.59:235,38,0	1/1:4,13:18:36.66:238,37,0	1/1:8,20:29:45.20:397,45,0	0/0:16,0:21:26.02:0,26,255	1/1:3,13:18:24.87:156,25,0	0/1:9,12:23:10.63:142,0,11	0/1:11,11:22:21.16:155,0,21	1/1:5,18:24:43.57:294,44,0	1/1:7,10:18:21.88:135,22,0	1/1:6,10:16:29.64:204,30,0	1/1:12,11:23:31:211,31,0	1/1:5,10:17:24.88:155,25,0	1/1:9,16:26:6.68:203,7,0	0/1:21,3:28:21.87:22,0,316	0/0:24,0:27:53.88:0,54,483	1/1:6,14:23:29.87:181,30,0	0/1:11,13:26:37.76:175,0,38	1/1:10,11:23:0.82:141,1,0	1/1:1,2:3:5.95:41,6,0
chr10	64233941	.	G	GAAAAA	13311.67	PASS	AB=0.798;AC=46;AF=0.821;AN=56;BaseQRankSum=1.553;DP=575;FS=10.317;HRun=13;HaplotypeScore=130.3744;InbreedingCoeff=0.7175;MQ=55.88;MQ0=4;MQRankSum=-7.112;QD=27.17;ReadPosRankSum=-4.416;VQSLOD=1.3831;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:13,1:28:52.39:916,52,0	1/1:3,0:4:6.02:117,6,0	0/0:19,0:10:9.11:0,9,85	0/1:25,0:11:13.09:13,0,22	1/1:12,1:18:18.06:314,18,0	1/1:4,2:14:33.10:615,33,0	1/1:9,4:17:32.64:573,33,0	1/1:22,0:27:35.71:483,36,0	0/1:7,0:17:13.59:14,0,110	1/1:16,1:23:34.64:661,35,0	1/1:18,6:26:36.01:639,36,0	1/1:8,4:16:30.10:627,30,0	0/0:16,0:17:35.80:0,36,506	1/1:13,2:21:33.11:692,33,0	1/1:4,6:11:21.07:542,21,0	1/1:7,4:18:30.10:670,30,0	1/1:14,2:25:39.13:762,39,0	1/1:10,0:17:21.07:463,21,0	1/1:17,1:25:27.03:399,27,0	1/1:19,2:33:58.88:957,59,0	1/1:7,3:13:18.04:231,18,0	1/1:15,7:25:48.11:1064,48,0	0/0:13,0:15:26.65:0,27,373	0/0:27,0:32:60.92:0,61,810	1/1:9,2:17:39.13:764,39,0	1/1:14,0:20:36.09:567,36,0	1/1:16,3:25:49.40:1022,49,0	1/1:2,2:5:9.03:209,9,0
chr10	64234180	.	GCC	G	887.55	PASS	AC=4;AF=0.077;AN=52;BaseQRankSum=4.298;DP=442;FS=7.825;HRun=3;HaplotypeScore=51.6657;InbreedingCoeff=0.9705;MQ=50.72;MQ0=49;MQRankSum=-4.921;QD=31.70;ReadPosRankSum=-2.453;VQSLOD=1.9561;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:7:18.06:0,18,320	0/0:5,0:5:15.05:0,15,290	./.	./.	1/1:2,6:8:18.06:275,18,0	0/0:8,0:8:24.07:0,24,429	0/0:30,0:27:60.19:0,60,1120	1/1:3,17:18:48.16:731,48,0	0/0:16,0:15:45.15:0,45,868	0/0:16,0:12:36.12:0,36,695	0/0:11,0:11:33.11:0,33,633	0/0:7,0:7:18.05:0,18,298	0/0:12,0:12:36.09:0,36,659	0/0:21,0:21:57.20:0,57,1098	0/0:21,0:21:60.21:0,60,1159	0/0:24,0:24:66.22:0,66,1240	0/0:29,0:26:72.25:0,72,1391	0/0:18,0:17:51.17:0,51,984	0/0:16,0:16:42.10:0,42,749	0/0:8,0:7:21.07:0,21,396	0/0:22,0:19:51.16:0,51,951	0/0:11,0:11:27.09:0,27,517	0/0:8,0:8:24.07:0,24,431	0/0:29,0:29:78.27:0,78,1497	0/0:13,0:13:33.11:0,33,638	0/0:20,0:20:54.19:0,54,1037	0/0:18,0:16:48.16:0,48,918	0/0:8,0:7:18.06:0,18,348
chr10	64234223	.	C	CA	2931.59	PASS	AB=0.745;AC=36;AF=0.643;AN=56;BaseQRankSum=-3.011;DP=563;FS=5.121;HRun=14;HaplotypeScore=72.6118;InbreedingCoeff=0.1247;MQ=54.91;MQ0=50;MQRankSum=-0.476;QD=6.79;ReadPosRankSum=-0.973;VQSLOD=2.4817;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:24:7.66:77,8,0	1/1:6,0:6:2.98:22,3,0	0/0:34,0:8:4.58:0,5,22	0/0:32,0:7:8.47:0,8,53	0/1:9,0:9:11.92:12,0,46	0/1:5,6:11:23.19:64,0,23	0/1:11,12:22:7.90:135,0,8	0/1:17,4:18:17.57:103,0,18	0/0:18,0:17:1.83:0,2,59	0/1:20,9:26:4.88:166,0,5	0/1:4,7:11:7.31:60,0,7	1/1:6,18:23:26.95:228,27,0	0/0:13,0:13:22.54:0,23,138	1/1:18,6:24:21.75:212,22,0	0/1:9,14:24:9.41:190,0,9	1/1:7,8:15:3.71:95,4,0	1/1:23,8:30:11.78:292,12,0	1/1:4,17:21:32.78:270,33,0	0/1:7,9:15:21.80:197,0,22	1/1:8,8:15:10.88:114,11,0	1/1:5,16:20:23.84:199,24,0	0/1:10,4:12:7.30:60,0,7	0/1:8,1:9:11.81:12,0,62	0/0:28,5:34:16.64:0,17,335	1/1:4,10:14:9:79,9,0	1/1:12,15:27:19.35:250,19,0	1/1:7,15:23:32.56:255,33,0	1/1:5,0:4:2.74:12,3,0
chr10	64234538	.	AT	A	2422.86	PASS	AB=0.857;AC=39;AF=0.696;AN=56;BaseQRankSum=1.266;DP=291;FS=29.631;HRun=10;HaplotypeScore=42.4913;InbreedingCoeff=0.7655;MQ=82.29;MQ0=3;MQRankSum=0.565;QD=14.34;ReadPosRankSum=1.751;VQSLOD=1.6877;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:54.09:0,54,575	1/1:0,6:6:14.95:123,15,0	0/0:26,1:14:4.69:0,5,54	0/0:27,1:17:18.88:0,19,127	0/1:5,1:6:10.99:11,0,118	1/1:2,5:7:12:104,12,0	1/1:1,6:7:5.99:52,6,0	0/0:14,0:14:23.90:0,24,406	0/0:4,0:4:6.02:0,6,66	1/1:0,11:11:32.93:274,33,0	1/1:2,1:3:6:52,6,0	1/1:4,5:9:11.99:104,12,0	0/0:10,0:10:30.08:0,30,332	1/1:2,7:9:14.99:130,15,0	1/1:2,9:11:26.97:234,27,0	1/1:1,5:6:11.99:104,12,0	1/1:4,12:16:26.98:234,27,0	1/1:2,11:13:20.70:182,21,0	1/1:7,8:14:20.85:172,21,0	1/1:1,5:6:17.96:150,18,0	1/1:3,12:15:17.99:156,18,0	1/1:3,4:7:1.95:99,2,0	0/0:6,0:6:12.03:0,12,132	0/0:7,0:8:19.57:0,20,185	1/1:0,7:7:18:156,18,0	1/1:3,4:7:11.98:100,12,0	1/1:1,2:3:6:52,6,0	1/1:0,5:5:15:130,15,0
chr10	64234592	.	GGTAGAGCGCTT	G	975.79	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.434;DP=251;FS=20.572;HRun=0;HaplotypeScore=78.1649;InbreedingCoeff=0.6345;MQ=67.18;MQ0=13;MQRankSum=-4.745;QD=81.32;ReadPosRankSum=0.944;VQSLOD=1.6419;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,11:11:30.10:1070,30,0	0/0:5,0:5:12.04:0,12,499	0/0:30,0:10:20.69:0,21,655	0/0:21,0:7:16.61:0,17,592	0/0:7,0:7:15.05:0,15,873	0/0:14,0:14:39.13:0,39,2271	0/0:17,0:17:45.15:0,45,2622	0/0:10,0:10:24.08:0,24,1044	0/0:2,0:2:6.02:0,6,350	0/0:12,0:12:30.10:0,30,1718	0/0:7,0:7:18.06:0,18,947	0/0:4,0:4:6.49:0,6,351	0/0:5,0:5:15.05:0,15,873	0/0:4,0:4:9.03:0,9,525	0/0:5,0:5:15.05:0,15,774	0/0:4,0:4:12.04:0,12,695	0/0:8,0:8:21.07:0,21,1178	0/0:7,0:7:15.05:0,15,847	0/0:15,0:14:42.14:0,42,2222	0/0:3,0:3:8.99:0,9,369	0/0:8,0:8:18.06:0,18,1049	0/0:5,0:5:12.04:0,12,698	0/0:7,0:7:18.06:0,18,1016	0/0:9,0:8:24.08:0,24,1368	0/0:5,0:5:15.05:0,15,874	0/0:8,0:8:21.07:0,21,1148	0/0:9,0:9:18.06:0,18,1025	0/0:8,0:8:24.08:0,24,1371
chr10	64234645	.	G	GAA	2585.46	PASS	AB=0.786;AC=44;AF=0.786;AN=56;BaseQRankSum=3.032;DP=420;FS=6.242;HRun=16;HaplotypeScore=123.1093;InbreedingCoeff=0.7156;MQ=53.12;MQ0=11;MQRankSum=-3.233;QD=7.93;ReadPosRankSum=-4.042;VQSLOD=-0.0620;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:16.98:0,17,117	1/1:6,0:6:2.94:19,3,0	0/1:22,0:4:2.06:2,0,17	0/0:25,0:13:11.53:0,12,99	1/1:18,0:17:13.61:107,14,0	1/1:13,0:13:27.52:182,28,0	1/1:20,0:19:25.08:199,25,0	0/0:9,0:9:12.96:0,13,61	0/1:3,7:12:9.20:71,0,9	1/1:20,0:19:25.70:158,26,0	1/1:16,0:17:16.76:132,17,0	1/1:11,0:11:14.62:141,15,0	0/0:11,0:13:12.04:0,12,103	1/1:15,0:13:20.29:138,20,0	1/1:9,0:9:13.87:85,14,0	1/1:6,0:5:12.37:93,12,0	1/1:16,0:15:10.96:99,11,0	1/1:14,0:11:8.90:72,9,0	1/1:21,0:19:24.13:165,24,0	1/1:17,0:16:29.95:218,30,0	1/1:8,0:7:10.10:59,10,0	1/1:14,0:14:21.39:133,21,0	1/1:7,0:7:2.99:24,3,0	0/0:16,0:21:31.31:0,31,238	1/1:16,0:16:31.69:209,32,0	1/1:12,0:11:20.18:145,20,0	1/1:17,1:19:26.55:191,27,0	1/1:12,0:12:19.76:123,20,0
chr10	64234666	.	GAAAAGA	G	223.47	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.218;DP=505;FS=1.943;HRun=0;HaplotypeScore=112.4196;InbreedingCoeff=0.8637;MQ=65.35;MQ0=6;MQRankSum=-2.592;QD=10.16;ReadPosRankSum=2.542;VQSLOD=2.5343;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:3,19:22:15.02:312,15,0	0/0:5,0:5:9.03:0,9,297	0/0:29,0:10:27.09:0,27,584	0/0:37,0:21:46.83:0,47,765	0/0:25,0:24:47.90:0,48,1038	0/0:14,0:14:18.03:0,18,518	0/0:13,0:12:24.08:0,24,627	0/0:19,0:19:43.39:0,43,987	0/0:15,0:15:24.06:0,24,560	0/0:25,0:24:48.75:0,49,1342	0/0:19,0:19:31.42:0,31,711	0/0:14,0:14:30.06:0,30,693	0/0:18,0:18:51.13:0,51,1540	0/0:19,0:18:30.09:0,30,742	0/0:10,0:10:15.05:0,15,371	0/0:14,0:13:32.32:0,32,923	0/0:23,0:21:42.53:0,43,1051	0/0:23,0:20:42.10:0,42,1047	0/0:31,0:30:75.12:0,75,2129	0/0:17,0:16:28.31:0,28,691	0/0:11,0:10:27.09:0,27,692	0/0:16,0:16:29.50:0,29,630	0/0:5,0:5:12.04:0,12,295	0/0:19,0:19:51.13:0,51,1626	0/0:15,0:15:24.07:0,24,649	0/0:14,0:14:21.07:0,21,695	0/0:22,0:22:45.62:0,46,1159	0/0:10,0:10:17.85:0,18,404
chr10	64236069	.	TTG	T	33.69	PASS	AB=0.824;AC=3;AF=0.054;AN=56;BaseQRankSum=0.934;DP=711;FS=1.633;HRun=0;HaplotypeScore=171.3274;InbreedingCoeff=0.0808;MQ=50.34;MQ0=10;MQRankSum=0.445;QD=0.53;ReadPosRankSum=1.334;VQSLOD=2.7085;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:28:2.93:0,3,23	0/0:12,0:11:2.97:0,3,20	1/1:36,0:15:1.55:4,2,0	0/0:16,0:8:12.82:0,13,131	0/0:22,0:22:2.99:0,3,23	0/0:23,0:22:8.21:0,8,56	0/0:36,0:35:12.01:0,12,116	0/0:42,0:40:45.86:0,46,501	0/0:17,0:20:5.85:0,6,61	0/0:28,0:28:57.42:0,57,632	0/0:13,0:11:8.98:0,9,75	0/0:22,0:22:3.93:0,4,28	0/1:22,6:28:99:107,0,712	0/0:33,0:33:8.99:0,9,76	0/0:37,0:37:24.42:0,24,218	0/0:34,0:34:17.77:0,18,166	0/0:22,0:22:8.93:0,9,81	0/0:18,0:18:17.99:0,18,184	0/0:28,0:24:6.02:0,6,70	0/0:20,0:18:2.60:0,3,43	0/0:22,0:22:6.02:0,6,78	0/0:30,0:30:15.48:0,15,158	0/0:19,0:19:39.13:0,39,603	0/0:26,1:27:60.20:0,60,922	0/0:20,0:18:2.66:0,3,26	0/0:33,0:32:57.04:0,57,652	0/0:25,0:25:23.65:0,24,203	0/0:15,0:14:9.03:0,9,107
chr10	64236084	.	T	TGTGTGTGTGTGT	6230.14	PASS	AB=1.000;AC=47;AF=0.839;AN=56;BaseQRankSum=2.484;DP=684;FS=3.491;HRun=0;HaplotypeScore=230.5199;InbreedingCoeff=0.4482;MQ=44.31;MQ0=15;MQRankSum=-5.077;QD=10.74;ReadPosRankSum=-2.984;VQSLOD=3.4396;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:27,5:31:2.62:43,3,0	1/1:13,0:12:3.01:94,3,0	0/1:51,0:19:4.78:5,0,47	0/0:33,0:12:0.06:0,0,23	1/1:18,0:18:3.01:44,3,0	1/1:18,0:17:9.03:267,9,0	1/1:36,0:35:15.52:645,16,0	1/1:33,0:31:13.03:77,13,0	1/1:20,0:20:2.90:156,3,0	1/1:24,0:24:12.93:134,13,0	1/1:14,0:12:9.03:240,9,0	1/1:20,0:20:4.42:158,4,0	0/0:28,0:28:63.20:0,63,1893	1/1:28,0:28:9.03:314,9,0	1/1:34,0:34:23.89:904,24,0	1/1:26,0:26:17.88:873,18,0	1/1:19,0:19:15.05:675,15,0	1/1:15,0:15:6.02:313,6,0	1/1:18,0:15:3:26,3,0	1/1:19,0:17:2.73:75,3,0	1/1:26,0:26:5.99:92,6,0	1/1:28,0:28:6.28:254,6,0	0/0:18,0:18:39.09:0,39,1131	0/0:25,0:25:54.13:0,54,1700	1/1:18,0:16:2.51:155,3,0	1/1:32,0:31:3.01:60,3,0	1/1:25,0:25:12.04:623,12,0	1/1:11,0:10:0.47:1,0,0
chr10	64236096	.	T	TGTGTGTGTGTGTGTGC	16656.51	PASS	AB=1.000;AC=42;AF=0.750;AN=56;BaseQRankSum=0.552;DP=658;FS=0.432;HRun=0;HaplotypeScore=300.1708;InbreedingCoeff=0.5353;MQ=45.72;MQ0=10;MQRankSum=-9.406;QD=32.41;ReadPosRankSum=0.367;VQSLOD=3.0150;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:28:28.46:28,0,73	1/1:10,0:10:5.94:216,6,0	0/0:42,0:18:45.36:0,45,521	0/0:31,0:13:23.68:0,24,295	0/1:16,0:16:35.45:35,0,41	1/1:15,2:16:12.04:587,12,0	1/1:37,2:39:53.41:2412,53,0	0/1:29,0:27:99:1131,0,236	0/1:23,0:23:99:352,0,138	1/1:24,0:24:64.91:1428,65,0	1/1:15,1:15:11.87:350,12,0	1/1:22,1:23:13.32:502,13,0	0/0:28,0:28:81.12:0,81,2650	1/1:23,0:24:8.37:415,8,0	1/1:28,3:33:30.28:1575,30,0	1/1:21,5:26:21.34:1403,21,0	1/1:16,1:17:35.79:1542,36,0	1/1:13,1:15:32.58:957,33,0	1/1:12,0:9:11.11:110,11,0	1/1:22,0:20:11.82:177,12,0	1/1:23,0:23:19.94:179,20,0	1/1:21,0:22:11.67:319,12,0	0/0:16,0:16:45.13:0,45,1576	0/0:27,0:27:72.14:0,72,2446	1/1:21,1:20:1.63:235,2,0	1/1:32,0:31:66.48:1345,66,0	1/1:21,2:25:36.90:1172,37,0	1/1:11,0:10:20.52:185,21,0
chr10	64236155	.	C	CCTGCCT	19897.29	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-6.964;DP=582;FS=2.196;HRun=0;HaplotypeScore=144.0919;InbreedingCoeff=0.9839;MQ=65.90;MQ0=0;MQRankSum=-14.931;QD=55.58;ReadPosRankSum=0.741;VQSLOD=4.8083;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,129,2541	1/1:1,6:8:18.06:607,18,0	0/0:23,0:22:51.06:0,51,972	0/0:22,0:20:40.60:0,41,891	0/0:18,0:18:46.96:0,47,864	1/1:8,8:16:19.82:744,20,0	1/1:19,8:32:21.54:709,22,0	0/0:30,0:30:57.19:0,57,1160	0/0:21,0:21:50.91:0,51,1073	1/1:12,14:26:63.21:1882,63,0	1/1:9,10:19:32.96:888,33,0	1/1:2,9:12:24.08:810,24,0	0/0:22,0:22:48.13:0,48,906	1/1:3,20:24:63.21:2049,63,0	1/1:13,13:27:27.09:908,27,0	1/1:1,19:20:48.16:1619,48,0	1/1:4,6:11:21.03:627,21,0	1/1:3,6:10:18.06:601,18,0	1/1:15,6:24:48.15:1193,48,0	1/1:11,11:23:30.10:900,30,0	1/1:9,5:15:8.73:303,9,0	1/1:7,14:21:42.14:1313,42,0	0/0:12,0:12:33.10:0,33,682	0/0:29,0:29:72.22:0,72,1490	1/1:5,12:18:39.13:1287,39,0	1/1:9,13:22:45.15:1470,45,0	1/1:6,13:22:42.14:1382,42,0	1/1:2,6:8:18.06:608,18,0
chr10	64237565	.	GTATT	G	527.65	PASS	AB=0.842;AC=15;AF=0.268;AN=56;BaseQRankSum=15.210;DP=877;FS=11.064;HRun=0;HaplotypeScore=412.5710;InbreedingCoeff=-0.3480;MQ=42.27;MQ0=15;MQRankSum=-9.586;QD=1.24;ReadPosRankSum=-5.745;VQSLOD=0.0148;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:35.09:0,35,505	0/1:8,4:12:53.79:60,0,54	0/0:60,0:22:65.21:0,65,1270	0/0:44,0:17:46.95:0,47,1065	0/0:30,0:28:77.84:0,78,1581	0/1:17,8:25:84.54:85,0,263	0/1:20,3:23:4.22:4,0,344	0/0:48,0:47:99:0,129,2804	0/1:28,7:35:38.18:38,0,1754	0/0:32,1:33:62.84:0,63,1029	0/1:18,3:21:18.64:19,0,203	0/1:19,6:24:59.74:60,0,228	0/0:36,0:36:99:0,108,2920	0/1:36,5:41:17.09:17,0,477	0/1:33,8:40:82.71:83,0,426	0/0:29,3:32:7.94:0,8,635	0/0:18,1:19:20.74:0,21,398	0/0:11,0:11:32.90:0,33,451	0/1:13,1:11:3.14:3,0,347	0/1:27,6:33:28.90:29,0,367	0/0:46,1:45:53.47:0,53,819	0/1:40,5:45:12.22:12,0,632	0/0:21,0:21:57.20:0,57,1593	0/0:54,0:54:99:0,156,3827	0/1:20,7:27:72.31:72,0,466	0/1:33,5:37:66.90:67,0,929	0/1:21,6:27:88.14:88,0,372	0/1:14,4:18:43.63:44,0,372
chr10	64237569	.	TTGTGTGTGTA	T	24339.19	PASS	AB=0.867;AC=36;AF=0.643;AN=56;BaseQRankSum=12.894;DP=948;FS=14.876;HRun=0;HaplotypeScore=501.3387;InbreedingCoeff=0.6591;MQ=40.04;MQ0=16;MQRankSum=-12.096;QD=40.23;ReadPosRankSum=-5.203;VQSLOD=3.5141;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:13,4:17:18.06:431,18,0	1/1:6,7:13:34.03:691,34,0	0/0:62,0:21:27.53:0,28,464	0/0:48,0:18:45.13:0,45,1058	0/0:35,0:34:29.68:0,30,1907	1/1:17,9:26:38.88:1104,39,0	1/1:23,3:26:15.80:599,16,0	0/0:44,0:43:7.26:0,7,1868	0/0:35,0:37:4.89:0,5,2128	1/1:27,14:41:93.78:2022,94,0	1/1:18,6:24:13.27:1063,13,0	1/1:24,7:30:78.03:1396,78,0	0/0:38,0:38:99:0,108,4436	1/1:20,22:42:99:2292,101,0	1/1:34,14:48:98.29:1855,98,0	0/1:23,12:35:99:1563,0,139	0/1:15,3:18:7.27:514,0,7	0/1:12,1:13:94.52:245,0,95	1/1:17,0:15:29.41:512,29,0	1/1:21,17:38:91.75:1917,92,0	0/1:43,3:44:84.42:488,0,84	1/1:27,19:47:99:2422,110,0	0/0:23,0:23:66.23:0,66,2776	0/0:54,0:54:99:0,148,5918	1/1:24,8:32:62.45:904,62,0	1/1:28,11:39:98.60:1971,99,0	1/1:15,13:28:73.55:1501,74,0	1/1:15,6:21:49.17:851,49,0
chr10	64237609	.	TTG	T	12474.50	PASS	AB=0.685;AC=40;AF=0.714;AN=56;BaseQRankSum=16.942;DP=1095;FS=1.208;HRun=0;HaplotypeScore=600.9337;InbreedingCoeff=0.4406;MQ=40.80;MQ0=5;MQRankSum=-10.429;QD=14.64;ReadPosRankSum=6.889;VQSLOD=3.7411;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:11,0:14:5.23:61,0,5	1/1:5,9:18:2.55:284,3,0	0/0:60,0:36:60.86:0,61,1082	0/0:59,1:33:65.39:0,65,1038	1/1:15,0:44:1.90:141,2,0	1/1:7,15:33:77.93:704,78,0	0/1:13,12:33:2.05:406,0,2	0/1:24,0:44:96.29:188,0,96	1/1:14,16:42:35.09:734,35,0	0/1:21,28:59:39.95:1089,0,40	1/1:7,16:30:5.55:511,6,0	1/1:12,19:42:8.96:655,9,0	0/0:39,0:39:96.31:0,96,1561	1/1:12,25:49:79.19:944,79,0	1/1:18,25:62:55.47:954,55,0	1/1:16,19:42:19.84:726,20,0	1/1:9,6:17:11.09:254,11,0	0/1:8,2:12:1.68:111,0,2	0/1:11,8:24:59.21:327,0,59	1/1:12,20:44:26.84:782,27,0	1/1:20,12:33:43.40:363,43,0	1/1:19,28:58:58.60:959,59,0	0/0:28,1:29:37.07:0,37,1153	0/0:52,1:53:94.08:0,94,2084	1/1:13,11:36:8.46:424,8,0	1/1:14,23:53:5.06:1000,5,0	1/1:11,15:36:23.96:596,24,0	1/1:4,4:16:36.67:263,37,0
chr10	64237613	.	G	GTATT	19281.66	PASS	AB=0.879;AC=24;AF=0.429;AN=56;BaseQRankSum=2.940;DP=1100;FS=1.958;HRun=0;HaplotypeScore=610.0782;InbreedingCoeff=-0.6493;MQ=41.52;MQ0=4;MQRankSum=-9.880;QD=22.27;ReadPosRankSum=-3.754;VQSLOD=3.8002;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:10,2:12:0.09:67,0,0	0/1:14,2:16:99:529,0,116	0/0:59,0:38:82.43:0,82,1628	0/0:57,0:32:85.17:0,85,1565	0/1:36,12:48:99:575,0,278	0/1:31,3:34:99:855,0,345	0/1:27,4:31:99:637,0,255	0/1:39,9:45:99:1050,0,240	0/1:38,6:44:99:1216,0,399	0/1:49,12:60:99:1616,0,784	0/1:26,4:31:99:672,0,309	0/1:39,8:46:99:1191,0,347	0/0:39,0:39:99:0,117,2131	0/1:48,2:50:99:768,0,549	0/1:54,10:63:99:1780,0,453	0/1:33,8:41:99:919,0,436	0/1:14,3:17:99:239,0,241	0/1:13,3:16:99:344,0,121	0/1:23,4:25:99:621,0,305	0/1:40,4:44:99:851,0,482	0/1:29,1:29:79.43:79,0,278	0/1:51,8:59:99:1079,0,490	0/0:29,0:29:84.29:0,84,1610	0/0:50,0:50:99:0,138,2656	0/1:26,9:36:99:1002,0,170	0/1:47,7:54:99:1535,0,680	0/1:35,3:38:99:1103,0,358	0/1:16,0:16:88.81:551,0,89
chr10	64237634	.	GAGTATA	G	8500.61	PASS	AB=0.833;AC=23;AF=0.411;AN=56;BaseQRankSum=12.452;DP=1086;FS=7.054;HRun=0;HaplotypeScore=632.3445;InbreedingCoeff=-0.6969;MQ=46.73;MQ0=0;MQRankSum=-14.547;QD=9.64;ReadPosRankSum=5.657;VQSLOD=-0.3331;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:12,2:14:29.53:30,0,609	0/1:12,3:15:99:110,0,563	0/0:39,0:37:99:0,106,3187	0/0:44,0:38:99:0,102,2920	0/1:39,14:53:99:380,0,2024	0/1:22,7:29:99:307,0,874	0/1:21,7:28:99:194,0,1111	0/1:37,13:47:99:662,0,1848	0/1:37,6:43:99:499,0,1811	0/1:43,17:60:99:1058,0,2505	0/1:18,11:29:99:482,0,1062	0/1:43,9:51:99:517,0,2342	0/0:36,0:36:99:0,108,3813	0/1:40,8:48:99:449,0,2057	0/1:54,14:67:99:574,0,3011	0/1:32,12:44:99:413,0,1923	0/1:21,1:22:52.54:53,0,951	0/1:19,1:20:79.19:79,0,1342	0/1:25,5:28:99:323,0,1391	0/1:26,13:39:99:307,0,1456	0/1:34,4:37:72.74:73,0,1094	0/1:36,14:50:99:563,0,1649	0/0:29,0:29:87.30:0,87,3060	0/0:51,0:51:99:0,147,4969	0/1:32,5:36:99:183,0,1642	0/1:42,17:59:99:966,0,2563	0/1:35,4:39:99:182,0,1905	0/1:11,4:15:98.14:98,0,797
chr10	64237714	.	A	ATGTGTG	13475.08	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=9.735;DP=1033;FS=4.231;HRun=0;HaplotypeScore=270.9329;InbreedingCoeff=0.9020;MQ=54.04;MQ0=13;MQRankSum=-3.963;QD=17.78;ReadPosRankSum=-1.551;VQSLOD=3.9519;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:7,18:33:23.46:656,23,0	1/1:3,0:14:14.13:191,14,0	0/0:52,0:19:15.72:0,16,335	0/0:57,0:25:25.63:0,26,424	1/1:15,6:24:14.60:364,15,0	1/1:5,0:22:33.11:426,33,0	1/1:13,0:38:38.71:475,39,0	1/1:29,1:29:0.19:222,0,0	0/0:41,0:42:99:0,105,2070	1/1:12,0:40:75.22:958,75,0	1/1:5,0:10:17.38:209,17,0	1/1:8,0:44:62.24:782,62,0	0/0:39,0:39:87.23:0,87,1784	1/1:15,0:44:75.24:990,75,0	1/1:14,0:55:25.63:1042,26,0	1/1:8,0:32:2.60:493,3,0	1/1:16,0:45:55.74:767,56,0	1/1:7,0:27:41.51:542,42,0	1/1:10,0:27:43.75:540,44,0	1/1:8,1:29:31.85:476,32,0	1/1:26,0:87:99:1404,109,0	1/1:9,0:43:60.19:776,60,0	0/0:27,0:29:63.20:0,63,1223	0/0:53,0:56:99:0,131,2831	1/1:14,0:25:44.47:560,44,0	1/1:14,0:38:59.50:790,60,0	1/1:12,0:26:41.37:501,41,0	1/1:4,0:18:24.08:310,24,0
chr10	64239064	.	AT	A	1615.99	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=3.323;DP=676;FS=8.521;HRun=8;HaplotypeScore=87.4009;InbreedingCoeff=0.9812;MQ=73.60;MQ0=0;MQRankSum=0.523;QD=24.86;ReadPosRankSum=-2.434;VQSLOD=2.9886;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,99,1196	0/0:17,0:17:48.15:0,48,580	0/0:14,0:14:32.96:0,33,356	0/0:16,0:15:11.21:0,11,305	1/1:0,30:30:87.14:840,87,0	0/0:17,0:17:45.14:0,45,544	0/0:21,0:21:57.17:0,57,689	1/1:4,31:35:93.14:898,93,0	0/0:24,0:24:63.16:0,63,746	0/0:23,0:23:66.19:0,66,786	0/0:21,0:21:63.18:0,63,751	0/0:21,0:21:57.17:0,57,688	0/0:20,0:20:60.16:0,60,702	0/0:20,0:20:51.14:0,51,595	0/0:27,0:27:72.22:0,72,870	0/0:29,0:29:81.23:0,81,958	0/0:34,0:34:96.29:0,96,1159	0/0:26,0:26:78.22:0,78,928	0/0:29,0:29:72.17:0,72,826	0/0:20,0:20:54.15:0,54,633	0/0:30,0:30:87.25:0,87,1039	0/0:21,0:21:54.16:0,54,649	0/0:25,1:26:46.24:0,46,831	0/0:32,0:32:90.28:0,90,1087	0/0:24,0:24:63.19:0,63,761	0/0:21,0:21:54.17:0,54,652	0/0:24,0:24:69.21:0,69,833	0/0:20,0:20:60.18:0,60,725
chr10	64239320	.	A	AAGGGGG	4464.46	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-3.434;DP=752;FS=14.610;HRun=0;HaplotypeScore=198.0602;InbreedingCoeff=0.9997;MQ=81.89;MQ0=1;MQRankSum=-9.549;QD=64.70;ReadPosRankSum=-5.395;VQSLOD=2.8399;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,135,2960	0/0:10,0:10:30.10:0,30,673	0/0:22,0:22:57.15:0,57,1074	0/0:23,0:21:44.99:0,45,859	1/1:11,21:34:72.25:2419,72,0	0/0:22,0:22:57.18:0,57,1236	0/0:26,0:26:69.24:0,69,1521	1/1:22,11:35:72.23:2046,72,0	0/0:31,0:31:84.29:0,84,1842	0/0:46,0:46:99:0,120,2642	0/0:23,0:23:60.19:0,60,1276	0/0:22,0:22:60.21:0,60,1325	0/0:26,0:26:69.24:0,69,1523	0/0:24,0:24:66.23:0,66,1479	0/0:38,0:38:96.33:0,96,2149	0/0:37,0:37:87.30:0,87,1902	0/0:31,0:31:87.30:0,87,1943	0/0:23,0:23:57.20:0,57,1272	0/0:22,0:22:60.21:0,60,1345	0/0:28,0:28:63.19:0,63,1328	0/0:28,0:28:78.27:0,78,1724	0/0:16,0:16:42.13:0,42,854	0/0:23,0:23:63.20:0,63,1370	0/0:26,0:26:69.24:0,69,1508	0/0:21,0:21:54.19:0,54,1194	0/0:22,0:22:66.23:0,66,1479	0/0:27,0:27:72.25:0,72,1607	0/0:17,0:17:48.16:0,48,1068
chr10	64242187	.	AAAAAGAAAG	A	3221.92	PASS	AB=1.000;AC=33;AF=0.635;AN=52;BaseQRankSum=8.726;DP=411;FS=0.000;HRun=0;HaplotypeScore=117.2999;InbreedingCoeff=0.3174;MQ=33.56;MQ0=56;MQRankSum=-5.572;QD=11.34;ReadPosRankSum=4.273;VQSLOD=1.8927;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:11,13:13:2.94:0,3,18	1/1:12,0:9:17.87:166,18,0	./.	./.	0/1:18,0:15:8.41:18,0,8	0/1:15,0:12:10.25:240,0,10	1/1:28,0:22:7.08:214,7,0	0/0:11,0:7:19.33:0,19,120	0/0:16,0:11:16.75:0,17,208	0/1:19,0:19:26.28:287,0,26	0/1:14,0:11:20.75:92,0,21	1/1:16,0:15:29.56:384,30,0	0/0:20,0:19:48.11:0,48,1509	1/1:7,0:6:8.96:74,9,0	0/1:18,0:17:6.71:192,0,7	1/1:13,0:13:23.82:243,24,0	1/1:11,0:7:11.90:136,12,0	0/1:14,0:8:37.91:120,0,38	1/1:5,0:4:4.41:58,4,0	1/1:15,0:15:26.81:287,27,0	1/1:8,0:6:2.49:9,2,0	1/1:11,0:9:8.54:57,9,0	0/0:19,0:17:30.01:0,30,1030	0/0:33,0:19:36.12:0,36,823	1/1:20,0:20:32.71:398,33,0	0/1:15,0:15:17.72:248,0,18	1/1:19,0:17:17.87:161,18,0	1/1:6,0:4:2.92:17,3,0
chr10	64242190	.	AAG	A	1362.62	PASS	AB=0.982;AC=38;AF=0.731;AN=52;BaseQRankSum=7.410;DP=386;FS=8.171;HRun=0;HaplotypeScore=87.6369;InbreedingCoeff=0.5057;MQ=31.45;MQ0=56;MQRankSum=-5.413;QD=5.10;ReadPosRankSum=1.941;VQSLOD=2.0535;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:15:7.05:0,7,35	1/1:11,0:8:15.15:57,15,0	./.	./.	1/1:15,0:12:6.69:45,7,0	0/1:15,0:12:5.60:82,0,6	1/1:26,0:20:8.67:71,9,0	0/1:14,0:10:8.80:9,0,47	0/0:16,0:11:22.08:0,22,202	1/1:15,1:16:31.80:171,32,0	0/1:12,1:10:19.02:90,0,19	1/1:14,0:13:24.54:109,25,0	0/0:18,0:17:42.10:0,42,612	1/1:7,0:6:7.49:28,7,0	1/1:13,1:13:26.68:126,27,0	1/1:11,0:11:20.47:84,20,0	1/1:10,0:6:10.51:45,11,0	0/1:14,0:8:24.18:24,0,39	1/1:5,0:5:8.05:45,8,0	1/1:13,0:13:26.46:121,26,0	1/1:6,0:4:2.60:10,3,0	1/1:11,0:9:10.55:48,11,0	0/0:20,0:18:30.02:0,30,436	0/0:35,0:21:37.86:0,38,431	1/1:18,0:18:32.32:140,32,0	1/1:13,1:14:10.55:153,11,0	1/1:16,0:14:15.72:68,16,0	1/1:4,0:2:2.60:10,3,0
chr10	64242191	.	AG	A	4697.96	PASS	AB=0.765;AC=38;AF=0.731;AN=52;BaseQRankSum=5.678;DP=379;FS=6.841;HRun=1;HaplotypeScore=71.2691;InbreedingCoeff=0.5293;MQ=31.19;MQ0=56;MQRankSum=-5.437;QD=17.93;ReadPosRankSum=1.223;VQSLOD=4.8710;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:15:6.28:0,6,33	1/1:2,8:8:18.06:239,18,0	./.	./.	1/1:13,2:12:1.74:38,2,0	0/1:5,8:12:3.82:212,0,4	1/1:9,18:21:13.46:317,13,0	0/1:13,0:9:10.11:10,0,46	0/0:16,0:11:23.77:0,24,222	1/1:3,9:14:38.97:459,39,0	0/1:7,6:10:5.41:198,0,5	1/1:2,9:13:30.06:389,30,0	0/0:17,0:16:42.09:0,42,517	1/1:0,6:6:9.03:123,9,0	1/1:5,7:12:28.25:329,28,0	1/1:0,10:11:24.08:325,24,0	1/1:6,3:6:12.04:164,12,0	0/1:10,4:8:22.50:112,0,23	1/1:2,3:5:11.50:130,11,0	1/1:2,8:12:29.08:353,29,0	1/1:5,0:4:1.60:5,2,0	1/1:5,6:9:12:144,12,0	0/0:19,0:17:29.93:0,30,366	0/0:35,0:21:37.94:0,38,396	1/1:3,12:18:44.97:527,45,0	1/1:6,6:14:22.25:338,22,0	1/1:3,13:14:18.06:245,18,0	1/1:3,1:2:3.01:42,3,0
chr10	64242252	.	GAAA	G	977.74	PASS	AB=0.915;AC=16;AF=0.286;AN=56;BaseQRankSum=5.851;DP=411;FS=1.929;HRun=3;HaplotypeScore=115.8700;InbreedingCoeff=-0.1662;MQ=32.55;MQ0=7;MQRankSum=-5.029;QD=4.40;ReadPosRankSum=-0.710;VQSLOD=-0.5872;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:3,0:3:6.02:0,6,67	0/0:5,0:3:2.94:0,3,18	0/0:6,0:2:6.02:0,6,148	0/0:8,0:2:6.02:0,6,145	0/1:14,2:12:33.19:33,0,103	0/1:14,3:14:99:145,0,124	0/0:15,0:12:18.46:0,18,205	0/0:14,0:11:32.88:0,33,322	0/1:17,0:12:24.02:49,0,24	0/1:16,3:14:99:117,0,161	0/0:14,1:10:3.46:0,3,113	0/1:18,3:17:52.37:184,0,52	0/0:23,0:23:69.24:0,69,1600	0/1:11,1:7:8.70:16,0,9	0/1:15,1:9:40.16:40,0,65	0/1:21,1:16:66.74:67,0,87	0/1:6,1:4:34.40:39,0,34	0/1:9,0:7:35.61:36,0,59	0/0:7,0:6:14.98:0,15,164	0/1:13,2:11:36.16:36,0,136	1/1:3,2:3:0.98:20,1,0	0/0:16,0:10:13.79:0,14,142	0/0:27,0:27:78.27:0,78,1879	0/0:33,0:29:70.02:0,70,1649	1/1:20,4:19:13.39:187,13,0	0/1:19,2:15:76.24:166,0,76	0/0:14,0:9:12.94:0,13,100	0/0:3,0:3:7.13:0,7,26
chr10	64242259	.	A	AG	1465.21	PASS	AB=0.727;AC=19;AF=0.339;AN=56;BaseQRankSum=3.362;DP=456;FS=5.143;HRun=2;HaplotypeScore=127.7015;InbreedingCoeff=-0.3977;MQ=32.78;MQ0=7;MQRankSum=-5.693;QD=4.71;ReadPosRankSum=1.956;VQSLOD=0.7934;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:3,0:4:8.86:0,9,88	0/1:7,2:7:37.83:38,0,44	0/0:6,0:2:6.02:0,6,74	0/0:8,0:2:6.02:0,6,74	0/0:14,0:11:8.85:0,9,78	0/1:14,5:16:86.71:87,0,89	0/1:9,9:16:67.87:127,0,68	0/1:18,1:15:34.27:34,0,349	0/1:15,0:11:13.11:67,0,13	0/1:12,10:18:99:229,0,168	0/1:5,8:11:46.30:46,0,103	0/1:11,11:20:81.06:124,0,81	0/0:25,0:25:75.21:0,75,904	0/1:5,7:7:8.02:8,0,17	0/1:7,10:10:54.06:66,0,54	0/1:13,11:18:57.26:57,0,138	0/0:6,3:7:12.26:0,12,58	0/0:7,3:8:3.97:0,4,70	0/1:6,2:7:1.70:2,0,153	0/1:13,5:14:40.06:40,0,66	1/1:5,1:4:5.38:45,5,0	0/1:7,10:13:53.74:54,0,75	0/0:27,0:27:78.23:0,78,953	0/0:36,0:33:80.95:0,81,989	0/1:13,13:21:77.28:288,0,77	0/1:11,11:16:98.99:184,0,99	0/1:4,11:10:22.81:126,0,23	0/0:4,0:3:8.02:0,8,33
chr10	64242267	.	AG	A	2465.53	PASS	AB=0.987;AC=29;AF=0.518;AN=56;BaseQRankSum=10.594;DP=468;FS=27.953;HRun=2;HaplotypeScore=121.1513;InbreedingCoeff=-0.2082;MQ=33.20;MQ0=6;MQRankSum=-9.379;QD=6.77;ReadPosRankSum=-0.316;VQSLOD=-0.7520;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:4:11.91:97,12,0	1/1:9,0:7:14.87:125,15,0	0/0:6,0:2:6.02:0,6,90	0/0:8,0:2:6.02:0,6,90	0/1:19,0:15:58.03:58,0,63	0/1:16,0:13:36.55:145,0,37	0/1:15,3:16:50.91:51,0,145	0/1:18,0:16:5.43:5,0,285	1/1:12,2:11:14.56:114,15,0	0/1:24,0:18:88.21:219,0,88	0/1:18,0:13:20.48:187,0,20	0/1:23,0:19:6.06:244,0,6	0/0:25,0:25:75.23:0,75,1077	1/1:12,0:7:10.81:92,11,0	0/1:16,0:9:51.60:63,0,52	0/1:23,0:17:39.60:142,0,40	0/1:12,0:9:20.66:134,0,21	0/1:12,1:11:11.17:11,0,24	0/1:9,0:8:20.30:20,0,89	0/1:21,0:17:17.48:241,0,17	0/1:7,0:5:3.31:17,0,3	0/1:19,0:14:77.07:116,0,77	0/0:27,0:27:78.24:0,78,1139	0/0:38,0:36:90.30:0,90,1332	1/1:24,0:19:31.43:275,31,0	0/1:24,0:18:24.75:125,0,25	0/1:15,0:10:35.87:70,0,36	1/1:6,0:5:7.62:86,8,0
chr10	64242269	.	GA	G	2413.32	PASS	AB=0.705;AC=29;AF=0.518;AN=56;BaseQRankSum=9.815;DP=467;FS=28.469;HRun=3;HaplotypeScore=121.9137;InbreedingCoeff=-0.2366;MQ=33.30;MQ0=6;MQRankSum=-9.047;QD=6.61;ReadPosRankSum=0.771;VQSLOD=-0.5784;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:3,2:5:10.29:83,0,10	1/1:4,5:7:14.74:141,15,0	0/0:6,0:2:6.02:0,6,85	0/0:8,0:2:6.02:0,6,86	0/1:16,3:15:5.58:6,0,74	0/1:8,7:13:3.37:139,0,3	0/1:10,9:16:58.90:145,0,59	0/1:14,4:15:88.19:88,0,99	0/1:5,9:11:2.66:155,0,3	0/1:14,12:20:59.19:263,0,59	1/1:9,9:13:3.24:107,3,0	1/1:13,11:20:6.16:214,6,0	0/0:25,0:25:69.23:0,69,983	1/1:5,8:8:9.96:45,10,0	0/1:5,11:9:22.21:66,0,22	0/1:10,12:16:9:94,0,9	0/1:9,3:9:24.23:40,0,24	1/1:10,3:11:3.84:21,4,0	0/1:5,3:7:22.51:42,0,23	0/1:11,10:17:12.96:222,0,13	1/1:3,4:5:3.48:43,3,0	0/1:7,10:12:33.57:83,0,34	0/0:27,0:27:78.26:0,78,1119	0/0:35,1:35:90.30:0,90,1290	0/1:10,14:19:28.84:281,0,29	0/1:11,13:18:34.25:174,0,34	0/1:4,11:10:7.06:109,0,7	0/1:6,0:5:13.91:14,0,33
chr10	64242325	.	G	GA	11783.80	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=8.611;DP=575;FS=27.652;HRun=5;HaplotypeScore=121.2452;InbreedingCoeff=0.9773;MQ=53.35;MQ0=12;MQRankSum=-6.313;QD=27.92;ReadPosRankSum=0.219;VQSLOD=2.7530;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,16:17:42.14:548,42,0	1/1:3,10:12:27.05:333,27,0	0/0:28,0:10:27.05:0,27,281	0/0:26,0:10:7.76:0,8,172	1/1:5,13:17:38.61:471,39,0	1/1:2,14:15:27.09:352,27,0	1/1:9,15:22:30.57:391,31,0	1/1:10,20:28:59.98:721,60,0	0/0:22,0:18:42.10:0,42,448	1/1:2,19:19:57.18:738,57,0	1/1:4,20:22:62:769,62,0	1/1:3,23:25:57.19:744,57,0	0/0:21,0:21:57.12:0,57,600	1/1:2,14:15:36.12:470,36,0	1/1:3,18:17:45.13:569,45,0	1/1:2,12:13:33.11:432,33,0	1/1:2,13:15:12.37:407,12,0	1/1:4,14:16:26.57:322,27,0	1/1:6,15:17:48.14:599,48,0	1/1:2,22:24:63.20:804,63,0	1/1:2,16:17:33.06:409,33,0	1/1:1,9:10:27.09:352,27,0	0/0:21,0:21:51.11:0,51,538	0/0:33,1:35:45.38:0,45,822	1/1:6,20:25:57.18:722,57,0	1/1:3,21:22:57.66:742,58,0	1/1:0,10:9:27.09:352,27,0	1/1:1,15:16:42.14:539,42,0
chr10	64242389	.	G	GCT	661.85	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-4.112;DP=644;FS=8.430;HRun=0;HaplotypeScore=110.9570;InbreedingCoeff=0.9662;MQ=84.26;MQ0=2;MQRankSum=0.042;QD=23.64;ReadPosRankSum=0.878;VQSLOD=4.4187;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:78.22:0,78,974	0/0:5,0:5:15.05:0,15,193	0/0:24,0:24:26.39:0,26,438	0/0:33,1:33:16.45:0,16,687	0/0:15,0:15:39.13:0,39,502	0/0:25,0:24:39.13:0,39,497	0/0:26,0:26:60.18:0,60,757	0/0:29,0:29:63.20:0,63,806	1/1:7,20:25:45.15:757,45,0	0/0:21,0:21:63.20:0,63,811	0/0:15,0:15:36.10:0,36,448	0/0:41,0:38:78.25:0,78,1003	0/0:18,0:18:48.16:0,48,618	0/0:18,0:16:36.12:0,36,463	0/0:21,0:18:33.06:0,33,393	0/0:15,0:14:39.13:0,39,502	0/0:42,0:40:99:0,108,1389	0/0:27,0:27:63.20:0,63,811	0/0:12,0:12:33.09:0,33,407	0/0:22,0:22:54.18:0,54,695	0/0:45,0:45:99:0,114,1466	0/0:10,0:10:21.07:0,21,270	0/0:10,0:10:27.09:0,27,348	0/0:34,0:34:44.40:0,44,1038	0/0:14,0:13:33.11:0,33,425	0/0:26,0:25:57.18:0,57,733	0/0:14,0:12:33.11:0,33,424	0/0:20,0:20:51.17:0,51,655
chr10	64246245	.	GA	G	1269.91	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=8.835;DP=682;FS=0.533;HRun=1;HaplotypeScore=80.3739;InbreedingCoeff=0.6466;MQ=73.03;MQ0=0;MQRankSum=-0.960;QD=18.14;ReadPosRankSum=-2.432;VQSLOD=3.1264;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,38:44:99:1336,127,0	0/0:14,0:14:42.08:0,42,583	0/0:30,0:29:78.24:0,78,1122	0/0:32,0:31:85.89:0,86,1178	0/0:26,0:26:78.27:0,78,1216	0/0:24,0:24:72.25:0,72,1124	0/0:21,0:21:63.19:0,63,934	0/1:26,0:26:40.33:40,0,160	0/0:35,0:35:30.69:0,31,339	0/0:23,0:23:63.21:0,63,985	0/0:15,0:15:42.11:0,42,612	0/0:22,0:22:66.16:0,66,937	0/0:26,0:26:78.23:0,78,1159	0/0:23,0:23:69.23:0,69,1074	0/0:19,0:19:54.17:0,54,817	0/0:18,0:18:51.14:0,51,752	0/0:25,0:24:75.24:0,75,1138	0/0:15,0:15:45.15:0,45,704	0/0:19,0:19:57.16:0,57,866	0/0:38,0:38:99:0,114,1771	0/0:15,0:15:45.15:0,45,701	0/0:25,0:25:75.26:0,75,1162	0/0:19,0:19:51.17:0,51,795	0/0:33,0:33:93.30:0,93,1427	0/0:21,0:21:63.18:0,63,939	0/0:39,0:39:99:0,114,1744	0/0:27,0:26:81.26:0,81,1233	0/0:8,0:8:24.06:0,24,352
chr10	64247136	.	GGTGTGT	G	84.59	PASS	AC=8;AF=0.267;AN=30;BaseQRankSum=1.659;DP=534;FS=2.667;HRun=0;HaplotypeScore=104.7532;InbreedingCoeff=0.3671;MQ=63.34;MQ0=25;MQRankSum=0.479;QD=0.82;ReadPosRankSum=2.027;VQSLOD=1.9554;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:32:12.98:0,13,265	./.	./.	./.	0/0:11,0:10:3.01:0,3,38	./.	1/1:34,0:35:1.42:3,1,0	0/0:22,0:21:0.89:0,1,2	./.	0/0:17,0:17:0:0,0,0	./.	1/1:16,4:20:3:60,3,0	./.	1/1:21,0:20:3.01:54,3,0	0/0:19,0:19:2.98:0,3,21	./.	0/0:35,0:36:2.98:0,3,22	1/1:24,2:24:3:60,3,0	0/0:22,0:20:3.01:0,3,30	./.	./.	0/0:9,0:9:3.01:0,3,33	0/0:7,0:7:3.01:0,3,74	0/0:29,0:30:12.02:0,12,195	./.	0/0:11,0:10:0.47:0,0,1	./.	./.
chr10	64248579	.	T	TAA	1439.64	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=6.481;DP=523;FS=7.277;HRun=5;HaplotypeScore=114.4606;InbreedingCoeff=0.7493;MQ=69.74;MQ0=6;MQRankSum=-8.661;QD=18.22;ReadPosRankSum=-5.467;VQSLOD=-0.4297;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:21,4:24:56.99:605,57,0	0/0:6,0:6:15.05:0,15,191	0/0:27,0:17:36.19:0,36,401	0/0:22,0:13:19.66:0,20,230	0/0:28,0:28:69.21:0,69,877	0/0:18,0:18:36.11:0,36,454	0/0:12,0:12:30.10:0,30,382	1/1:25,3:27:57.08:760,57,0	0/1:26,0:26:49.23:204,0,49	0/0:12,0:12:30.08:0,30,367	0/0:24,0:24:57.16:0,57,712	0/0:11,0:11:17.66:0,18,229	0/0:16,0:16:42.11:0,42,520	0/0:14,0:14:21.04:0,21,253	0/0:14,0:14:21.05:0,21,252	0/0:17,0:18:10.96:0,11,390	0/0:32,0:31:48.14:0,48,607	0/0:26,0:26:57.07:0,57,676	0/0:16,0:15:32.93:0,33,416	0/0:15,0:15:39.10:0,39,496	0/0:12,0:12:22.96:0,23,273	0/0:8,0:8:17.98:0,18,216	0/0:12,0:12:33.10:0,33,420	0/0:29,0:29:78.25:0,78,994	0/0:14,0:14:24.08:0,24,305	0/0:13,0:13:27.08:0,27,344	0/0:26,0:25:41.78:0,42,520	0/0:19,0:19:36.11:0,36,458
chr10	64248585	.	CA	C	271.44	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=8.459;DP=583;FS=0.789;HRun=9;HaplotypeScore=113.6262;InbreedingCoeff=0.7949;MQ=63.71;MQ0=9;MQRankSum=-6.851;QD=3.44;ReadPosRankSum=-0.894;VQSLOD=0.2971;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:23:10.15:34,10,0	0/0:6,0:6:15.04:0,15,173	0/1:29,0:16:0.23:0,0,160	0/0:26,0:13:15.90:0,16,239	0/0:31,0:31:72.11:0,72,787	0/0:26,0:25:36.01:0,36,369	0/0:12,0:12:24.07:0,24,277	0/0:31,0:30:7.62:0,8,109	1/1:13,12:26:37.12:352,37,0	0/0:16,0:16:30.07:0,30,336	0/0:27,0:28:72.16:0,72,791	0/0:11,0:11:27.94:0,28,295	0/0:19,0:19:48.13:0,48,542	0/0:19,0:19:23.47:0,23,276	0/0:15,0:15:15.04:0,15,173	0/0:15,0:15:38.95:0,39,401	0/0:32,0:31:51.09:0,51,562	0/0:24,0:24:56.53:0,57,559	0/0:18,0:18:39.53:0,40,424	0/0:21,0:21:39.89:0,40,434	0/0:12,0:12:14.77:0,15,141	0/0:11,0:11:23.99:0,24,245	0/0:13,0:13:33.10:0,33,381	0/0:26,0:26:72.21:0,72,830	0/0:25,0:24:30.53:0,31,326	0/0:17,0:17:38.98:0,39,404	0/0:29,0:29:47.90:0,48,498	0/0:19,0:18:39.10:0,39,433
chr10	64248591	.	AAAAC	A	1336.71	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=8.068;DP=603;FS=6.343;HRun=0;HaplotypeScore=136.8321;InbreedingCoeff=0.7820;MQ=60.33;MQ0=11;MQRankSum=-7.453;QD=13.37;ReadPosRankSum=-1.390;VQSLOD=2.6945;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:25,1:25:14.48:352,14,0	0/0:6,0:6:18.06:0,18,360	0/0:30,0:15:5.44:0,5,242	0/0:32,0:18:9.75:0,10,555	0/0:29,0:29:77.97:0,78,1409	0/0:24,0:23:42.91:0,43,714	0/0:12,0:12:29.13:0,29,614	1/1:17,12:28:33.20:604,33,0	1/1:26,0:26:45.13:517,45,0	0/0:16,0:16:42.09:0,42,631	0/0:32,0:32:40.81:0,41,1273	0/0:14,0:14:36.97:0,37,530	0/0:18,0:18:54.16:0,54,1088	0/1:19,0:19:6.99:7,0,502	0/0:14,0:14:15.05:0,15,284	0/0:14,0:14:40.84:0,41,632	0/0:32,0:31:47.16:0,47,910	0/0:22,0:23:23.85:0,24,859	0/0:22,0:21:23.01:0,23,483	0/0:20,0:20:47.60:0,48,890	0/0:9,0:9:7.81:0,8,270	0/0:12,0:12:33.06:0,33,597	0/0:15,0:15:45.15:0,45,924	0/0:28,0:28:81.18:0,81,1617	0/0:29,0:28:40.53:0,41,612	0/0:22,0:22:60.70:0,61,1014	0/0:31,0:30:30.54:0,31,739	0/0:19,0:18:35.11:0,35,648
chr10	64248598	.	AAAC	A	762.40	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=6.436;DP=622;FS=13.263;HRun=0;HaplotypeScore=134.7710;InbreedingCoeff=0.1820;MQ=57.22;MQ0=11;MQRankSum=-6.318;QD=7.94;ReadPosRankSum=-3.281;VQSLOD=1.5437;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:26:29.24:83,0,29	0/0:7,0:7:8.14:0,8,207	0/0:30,0:14:31.64:0,32,413	0/0:32,0:18:23.03:0,23,728	0/0:29,0:29:34.89:0,35,889	0/0:26,0:25:2.42:0,2,363	0/0:12,0:12:30.01:0,30,388	0/0:27,0:26:3.28:0,3,161	1/1:13,13:26:61.70:765,62,0	0/0:15,0:15:38.81:0,39,447	0/0:32,0:32:22.26:0,22,877	0/0:17,0:17:2.25:0,2,309	0/0:18,0:18:54.18:0,54,1117	0/1:19,0:19:25.69:26,0,299	0/0:17,0:17:2.25:0,2,147	0/0:15,0:15:10.73:0,11,480	0/0:31,0:30:45:0,45,704	0/0:22,0:22:18.20:0,18,638	0/0:22,0:20:3.38:0,3,297	0/1:24,0:24:7.62:8,0,679	0/0:11,0:10:8.75:0,9,193	0/0:13,0:13:32.56:0,33,497	0/0:16,0:16:48.14:0,48,970	0/0:28,0:28:81.24:0,81,1615	0/0:31,0:30:10.73:0,11,392	0/0:24,0:24:58.35:0,58,760	0/0:30,0:29:32.24:0,32,539	0/0:21,0:20:29.30:0,29,340
chr10	64248601	.	C	CA	3780.04	PASS	AB=0.730;AC=32;AF=0.571;AN=56;BaseQRankSum=1.845;DP=629;FS=3.636;HRun=5;HaplotypeScore=111.5932;InbreedingCoeff=0.3967;MQ=58.23;MQ0=11;MQRankSum=0.716;QD=8.92;ReadPosRankSum=-1.879;VQSLOD=0.4026;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:27:12.63:0,13,74	0/1:3,4:8:3.50:92,0,4	0/0:29,0:13:13.93:0,14,157	0/0:31,0:18:15.97:0,16,311	1/1:10,17:27:20.42:263,20,0	0/1:13,12:27:1.53:156,0,2	1/1:4,8:13:20.85:216,21,0	0/0:24,0:27:40.98:0,41,223	0/0:24,0:25:6.96:0,7,43	1/1:8,8:16:6.64:195,7,0	1/1:16,15:33:23.14:305,23,0	1/1:12,3:16:22.92:234,23,0	0/0:18,0:18:51.12:0,51,545	1/1:8,12:20:11.56:108,12,0	1/1:2,16:18:15.04:160,15,0	0/1:12,1:14:18.33:74,0,18	0/1:14,16:29:38.47:117,0,38	1/1:19,2:21:8.22:171,8,0	1/1:19,1:20:7.27:136,7,0	0/1:17,10:27:6.46:400,0,6	0/1:8,2:10:9.06:77,0,9	0/1:9,4:13:17.77:140,0,18	0/0:18,0:18:51.07:0,51,522	0/0:28,0:28:81.20:0,81,869	1/1:10,21:31:1.56:182,2,0	0/1:18,8:26:19.18:333,0,19	1/1:12,18:29:19.14:197,19,0	1/1:8,11:18:20.59:225,21,0
chr10	64248605	.	AAC	A	3130.01	PASS	AB=0.969;AC=33;AF=0.589;AN=56;BaseQRankSum=5.466;DP=637;FS=0.359;HRun=0;HaplotypeScore=122.1381;InbreedingCoeff=-0.0269;MQ=60.61;MQ0=11;MQRankSum=-0.743;QD=6.10;ReadPosRankSum=-3.642;VQSLOD=1.9299;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:12,17:28:33.62:440,0,34	0/1:8,0:8:14.83:15,0,18	0/0:28,0:13:26.46:0,26,303	0/0:32,0:20:38.53:0,39,495	0/1:28,0:28:60.35:175,0,60	0/1:31,0:30:8.23:144,0,8	1/1:14,0:14:5.75:96,6,0	1/1:31,0:30:27.71:294,28,0	1/1:25,0:25:56:586,56,0	0/1:16,0:16:18.07:93,0,18	0/1:33,0:33:44.03:159,0,44	0/1:16,0:16:34.54:57,0,35	0/0:19,0:19:54.17:0,54,859	1/1:20,0:20:23.74:145,24,0	1/1:18,0:18:10.72:51,11,0	0/1:14,0:14:41.20:41,0,68	0/1:27,1:27:47.17:47,0,56	0/1:21,0:21:64.61:82,0,65	1/1:20,0:18:0.01:134,0,0	0/1:26,0:26:29.07:128,0,29	1/1:14,0:13:4.58:96,5,0	0/1:14,0:14:21.19:21,0,64	0/0:17,0:17:51.16:0,51,797	0/0:27,0:27:81.24:0,81,1257	1/1:33,0:32:14.71:118,15,0	0/1:27,0:27:53.79:104,0,54	1/1:28,0:27:5.44:123,5,0	1/1:19,0:18:29.81:162,30,0
chr10	64248606	.	AC	A	6251.40	PASS	AB=0.935;AC=45;AF=0.804;AN=56;BaseQRankSum=6.087;DP=624;FS=15.133;HRun=1;HaplotypeScore=101.9304;InbreedingCoeff=0.8850;MQ=59.97;MQ0=11;MQRankSum=-2.079;QD=12.40;ReadPosRankSum=-3.397;VQSLOD=1.6990;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:27,2:28:12.53:309,0,13	1/1:8,0:8:17:99,17,0	0/0:26,0:11:22.55:0,23,242	0/0:32,0:19:33.13:0,33,375	1/1:27,0:27:55.79:394,56,0	1/1:32,0:31:55.89:414,56,0	1/1:14,0:14:26.18:222,26,0	1/1:29,0:28:50.11:342,50,0	1/1:24,1:25:54.56:376,55,0	1/1:15,0:15:30.52:258,31,0	1/1:32,0:32:74.37:492,74,0	1/1:16,0:16:36.53:215,37,0	0/0:18,0:18:54.15:0,54,658	1/1:20,0:20:29.87:235,30,0	1/1:18,0:18:18.97:120,19,0	1/1:13,0:13:20.76:107,21,0	1/1:25,0:24:23.60:165,24,0	1/1:20,0:20:24.50:224,24,0	1/1:20,0:18:36.50:280,36,0	1/1:25,1:26:54.71:391,55,0	1/1:14,0:13:30.83:222,31,0	1/1:14,0:14:20.12:129,20,0	0/0:17,0:17:51.15:0,51,628	0/0:27,0:27:81.23:0,81,991	1/1:34,0:33:48.49:373,48,0	1/1:26,1:27:53.66:348,54,0	1/1:27,0:27:35.70:252,36,0	1/1:19,0:18:38.70:285,39,0
chr10	64248607	.	C	CA	4289.54	PASS	AB=1.000;AC=36;AF=0.643;AN=56;BaseQRankSum=4.095;DP=633;FS=3.069;HRun=9;HaplotypeScore=109.5748;InbreedingCoeff=0.3723;MQ=60.73;MQ0=11;MQRankSum=-2.186;QD=8.90;ReadPosRankSum=-1.370;VQSLOD=3.3095;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:31,0:30:9.78:15,0,10	0/1:8,0:8:3.44:92,0,3	0/0:27,0:12:29.65:0,30,218	0/0:32,0:19:22.39:0,22,247	1/1:28,0:28:22.03:268,22,0	1/1:32,0:31:1.75:183,2,0	1/1:14,0:14:19.24:178,19,0	0/0:31,0:30:21.30:0,21,182	1/1:13,13:26:48.16:410,48,0	1/1:15,0:15:12.44:203,12,0	1/1:32,0:32:33.76:321,34,0	1/1:16,0:16:22.43:235,22,0	0/0:18,0:18:50.97:0,51,440	1/1:20,0:20:9.63:103,10,0	1/1:18,0:18:15.51:160,16,0	0/1:13,0:13:18.45:74,0,18	0/1:25,0:24:38.51:117,0,39	1/1:20,0:20:9.65:185,10,0	1/1:20,0:18:7.58:140,8,0	0/1:26,0:26:5.75:401,0,6	0/1:14,0:13:4.24:101,0,4	0/1:15,0:15:17.19:142,0,17	0/0:16,0:16:47.99:0,48,417	0/0:27,0:27:74.97:0,75,647	1/1:34,0:33:6.87:208,7,0	0/1:28,0:28:18.01:331,0,18	1/1:28,0:28:19.92:199,20,0	1/1:19,0:18:21.05:226,21,0
chr10	64255955	.	GAAAC	G	11678.20	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=7.092;DP=642;FS=6.688;HRun=0;HaplotypeScore=100.9611;InbreedingCoeff=0.9306;MQ=56.87;MQ0=7;MQRankSum=1.019;QD=22.94;ReadPosRankSum=-0.042;VQSLOD=4.2167;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:17,28:45:71.93:1149,72,0	1/1:2,1:3:3.01:48,3,0	0/0:25,0:9:15.03:0,15,310	0/0:29,0:13:20.98:0,21,328	1/1:7,9:16:17.99:233,18,0	1/1:5,16:20:45.15:719,45,0	1/1:16,13:29:33.07:498,33,0	1/1:15,11:24:29.57:423,30,0	1/1:8,14:22:33.11:527,33,0	1/1:10,7:17:23.74:361,24,0	1/1:3,4:7:8.99:116,9,0	1/1:5,17:22:45.15:717,45,0	0/0:27,0:27:60.21:0,60,1403	1/1:7,15:22:42.10:633,42,0	1/1:6,25:31:54.18:862,54,0	1/1:6,14:20:27.09:431,27,0	1/1:12,15:27:42.14:670,42,0	1/1:9,22:31:42.14:671,42,0	1/1:11,11:22:32.56:493,33,0	1/1:6,6:12:18.06:287,18,0	1/1:14,31:43:72.16:1149,72,0	1/1:15,7:22:14.95:196,15,0	0/0:17,0:17:33.11:0,33,780	0/0:35,0:35:72.24:0,72,1720	1/1:5,9:14:24.08:383,24,0	1/1:12,10:22:30.09:441,30,0	1/1:15,11:26:27.09:431,27,0	1/1:1,6:7:15.05:239,15,0
chr10	64257302	.	TCA	T	925.17	PASS	AB=0.817;AC=28;AF=0.778;AN=36;BaseQRankSum=1.696;DP=625;FS=0.000;HRun=0;HaplotypeScore=77.8744;InbreedingCoeff=0.3589;MQ=60.20;MQ0=32;MQRankSum=0.287;QD=2.79;ReadPosRankSum=-0.009;VQSLOD=1.6936;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	1/1:9,0:8:8.99:84,9,0	./.	./.	0/1:18,0:19:0.06:0,0,0	./.	1/1:31,1:30:5.84:45,6,0	./.	1/1:18,0:24:5.68:28,6,0	./.	1/1:7,1:8:3.01:31,3,0	1/1:27,0:30:14.53:104,15,0	0/0:17,0:16:13.28:0,13,153	1/1:13,4:18:8.72:94,9,0	1/1:17,7:26:11.85:108,12,0	0/1:13,6:20:25.92:122,0,26	1/1:34,3:35:17.37:151,17,0	1/1:17,7:24:15.29:140,15,0	./.	1/1:13,0:12:2.98:21,3,0	1/1:41,0:38:3.45:22,3,0	./.	0/0:11,0:11:3.01:0,3,43	0/0:39,1:41:0.63:0,1,327	./.	1/1:21,0:21:3:25,3,0	./.	1/1:5,2:7:6.01:63,6,0
chr10	64257651	.	A	ATGTGTGTGTG	6498.17	PASS	AB=0.977;AC=39;AF=0.780;AN=50;BaseQRankSum=-1.538;DP=623;FS=4.589;HRun=0;HaplotypeScore=208.1346;InbreedingCoeff=0.4734;MQ=66.74;MQ0=3;MQRankSum=-2.967;QD=13.45;ReadPosRankSum=0.523;VQSLOD=3.8314;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:31,0:31:3.82:70,4,0	1/1:7,0:8:3.01:34,3,0	0/0:31,0:24:2.90:0,3,16	./.	1/1:17,0:18:18:229,18,0	1/1:11,7:27:6.02:141,6,0	1/1:25,0:43:16.44:269,16,0	1/1:28,0:27:14.98:96,15,0	0/1:6,0:14:38.54:39,0,42	1/1:23,0:23:23.10:395,23,0	./.	1/1:11,9:23:8.31:276,8,0	0/0:21,0:21:23.98:0,24,415	1/1:14,0:17:14.75:269,15,0	1/1:20,0:21:15.44:289,15,0	1/1:12,2:14:15.04:399,15,0	1/1:16,0:22:15.11:370,15,0	1/1:18,7:28:27.09:797,27,0	1/1:14,0:17:14.40:258,14,0	./.	0/1:52,0:52:21.13:392,0,21	1/1:15,1:19:11.38:270,11,0	0/0:15,0:15:12.04:0,12,315	0/0:30,0:31:59.34:0,59,1196	0/1:18,0:19:7.82:109,0,8	1/1:18,9:29:53.47:1349,53,0	1/1:16,0:17:23.91:435,24,0	1/1:8,0:10:2.60:10,3,0
chr10	64257684	.	TGCGTGCGTGC	T	1753.69	PASS	AB=0.972;AC=15;AF=0.268;AN=56;BaseQRankSum=-0.695;DP=574;FS=0.000;HRun=0;HaplotypeScore=181.7154;InbreedingCoeff=-0.1457;MQ=47.19;MQ0=13;MQRankSum=-0.374;QD=5.68;ReadPosRankSum=-5.196;VQSLOD=0.6888;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:25:28.78:691,29,0	0/0:7,0:7:12.04:0,12,253	0/1:19,0:5:13.32:108,0,13	0/0:16,0:5:8.81:0,9,124	0/1:13,0:12:99:113,0,202	0/0:21,0:21:17.96:0,18,546	0/0:44,0:44:23.36:0,23,1094	0/1:19,0:18:3.12:223,0,3	0/1:22,0:22:99:186,0,145	0/1:16,7:23:99:115,0,1112	0/0:9,0:9:12.03:0,12,341	0/0:20,0:19:26.40:0,26,542	0/0:26,0:25:63.37:0,63,1613	0/1:20,0:20:97.04:97,0,341	0/1:16,0:15:99:127,0,298	0/1:18,0:19:68.57:69,0,733	0/1:25,0:23:13.88:14,0,809	0/0:17,0:17:45.13:0,45,1350	0/0:12,0:11:29.39:0,29,563	0/0:5,0:5:10.28:0,10,241	0/1:53,0:52:13.79:14,0,1922	0/1:18,0:18:53.34:53,0,344	0/0:13,0:12:27.09:0,27,1097	0/0:35,0:35:90.06:0,90,3110	0/1:20,0:20:94.09:94,0,420	0/0:32,0:31:34.62:0,35,1861	0/1:15,0:15:10.84:11,0,599	0/0:7,0:6:9.03:0,9,237
chr10	64257690	.	C	CGT	226.32	PASS	AB=0.991;AC=13;AF=0.232;AN=56;BaseQRankSum=6.591;DP=578;FS=4.623;HRun=0;HaplotypeScore=135.9666;InbreedingCoeff=0.0739;MQ=48.01;MQ0=12;MQRankSum=-2.082;QD=0.92;ReadPosRankSum=-2.410;VQSLOD=2.1148;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:26:6.37:50,6,0	0/0:10,0:10:15.02:0,15,177	0/1:23,0:9:7.64:8,0,68	0/0:16,0:5:12.01:0,12,146	0/1:9,0:8:9.47:9,0,115	0/0:20,0:20:20.99:0,21,256	0/0:43,0:43:10.66:0,11,605	1/1:18,3:18:8.46:229,8,0	0/1:21,1:22:14.83:15,0,61	0/1:26,0:26:6.16:6,0,500	0/0:9,0:9:12.04:0,12,172	0/0:20,0:19:27.30:0,27,302	0/0:24,0:23:53.70:0,54,696	0/1:24,0:24:6.35:6,0,292	0/0:14,0:13:14.77:0,15,189	0/1:22,0:22:22.07:22,0,341	0/1:27,0:25:2.91:3,0,438	0/0:18,0:18:10.58:0,11,529	0/0:14,0:13:27.28:0,27,268	0/0:6,0:6:15.04:0,15,190	0/0:49,0:48:48.56:0,49,930	0/0:16,0:16:14.77:0,15,171	0/0:14,0:14:33.10:0,33,449	0/0:34,0:34:83.72:0,84,1157	0/0:18,0:18:0.07:0,0,247	0/1:31,0:30:19.06:19,0,781	0/1:14,0:14:0.37:0,0,297	0/0:7,0:6:8.39:0,8,94
chr10	64258455	.	T	TAGGCATA	2522.77	PASS	AB=0.800;AC=43;AF=0.977;AN=44;BaseQRankSum=-2.169;DP=65;FS=9.547;HRun=0;HaplotypeScore=15.7328;InbreedingCoeff=-0.1625;MQ=81.11;MQ0=0;MQRankSum=-2.113;QD=42.05;ReadPosRankSum=-0.535;VQSLOD=1.0787;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,0:1:3:25,3,0	./.	1/1:2,2:7:21.06:660,21,0	0/1:3,0:4:54.06:175,0,54	1/1:2,0:2:3:25,3,0	1/1:1,0:1:3.01:50,3,0	./.	1/1:3,0:3:6:76,6,0	1/1:3,0:3:6.02:105,6,0	1/1:3,0:3:6.02:177,6,0	1/1:4,0:4:3.01:51,3,0	1/1:5,0:5:12.01:154,12,0	1/1:1,0:1:3:25,3,0	1/1:3,0:3:6.02:100,6,0	1/1:1,0:1:3.01:56,3,0	1/1:2,0:2:6.02:132,6,0	1/1:3,0:3:3.01:68,3,0	./.	1/1:3,0:3:9.02:134,9,0	1/1:1,0:1:3.01:75,3,0	1/1:4,0:4:12.04:299,12,0	./.	1/1:2,0:2:3:25,3,0	1/1:3,0:3:3.01:50,3,0	./.	1/1:1,0:1:3.01:91,3,0	1/1:3,0:3:3.01:57,3,0	./.
chr10	64281358	.	CTG	C	9668.86	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=4.085;DP=661;FS=12.513;HRun=0;HaplotypeScore=84.1139;InbreedingCoeff=0.9628;MQ=60.71;MQ0=28;MQRankSum=3.990;QD=22.13;ReadPosRankSum=6.692;VQSLOD=4.2112;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:52.67:0,53,627	1/1:2,6:7:14.91:165,15,0	0/0:28,0:10:9.03:0,9,138	0/0:52,0:25:18.98:0,19,385	0/0:10,0:10:27.09:0,27,446	1/1:1,30:31:57.18:713,57,0	1/1:5,19:21:54.17:675,54,0	0/0:37,0:36:36.17:0,36,604	0/0:15,0:15:10.59:0,11,140	1/1:4,13:15:41.96:500,42,0	1/1:1,16:15:33.11:413,33,0	1/1:2,30:31:51.05:634,51,0	0/0:16,0:16:42.14:0,42,678	1/1:2,16:18:25.40:437,25,0	1/1:2,19:21:42.13:525,42,0	1/1:5,18:21:30.10:375,30,0	1/1:7,33:36:57.18:713,57,0	1/1:4,17:20:35.48:421,35,0	1/1:5,18:21:51.04:571,51,0	1/1:2,15:16:27.09:338,27,0	1/1:17,49:63:99:1458,117,0	1/1:2,8:8:21.07:263,21,0	0/0:9,0:9:27.09:0,27,439	0/0:27,0:27:69.24:0,69,1117	1/1:3,7:9:6.02:75,6,0	1/1:2,16:17:45.10:533,45,0	1/1:2,21:22:36.12:450,36,0	1/1:4,14:18:33.11:413,33,0
chr10	64281370	.	G	GTGTCTGTC	470.32	PASS	AB=1.000;AC=8;AF=0.143;AN=56;BaseQRankSum=-2.263;DP=670;FS=0.000;HRun=0;HaplotypeScore=179.0279;InbreedingCoeff=0.6518;MQ=60.45;MQ0=28;MQRankSum=-2.403;QD=3.01;ReadPosRankSum=-2.722;VQSLOD=2.0178;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,0:33:7.97:136,8,0	0/0:7,0:6:15.05:0,15,295	0/0:27,0:8:9.02:0,9,121	0/1:51,0:23:5.76:6,0,397	0/0:10,0:10:30.10:0,30,736	0/0:31,0:31:45.11:0,45,808	0/0:25,0:24:52.38:0,52,991	1/1:32,0:32:39.26:319,39,0	1/1:5,12:18:5.85:139,6,0	0/0:19,0:18:54.17:0,54,918	0/0:17,0:15:27.07:0,27,490	0/0:31,0:30:48.01:0,48,927	0/0:15,0:15:42.12:0,42,916	0/0:17,0:17:33.11:0,33,672	0/0:25,0:25:54.13:0,54,958	0/0:25,0:23:48.12:0,48,805	0/0:41,0:39:69.10:0,69,1113	0/1:22,0:21:5.86:6,0,419	0/0:23,0:21:38.12:0,38,636	0/0:20,0:18:33.05:0,33,560	0/0:61,0:59:99:0,123,2251	0/0:8,0:7:21.07:0,21,428	0/0:9,0:9:24.08:0,24,585	0/0:28,0:28:75.22:0,75,1708	0/0:7,0:6:6.02:0,6,122	0/0:21,0:20:51.16:0,51,948	0/0:26,0:24:51.16:0,51,919	0/0:14,0:14:33.11:0,33,673
chr10	64281913	.	GGCCT	G	4383.77	PASS	AB=1.000;AC=41;AF=0.854;AN=48;BaseQRankSum=4.008;DP=383;FS=1.910;HRun=0;HaplotypeScore=64.5037;InbreedingCoeff=0.5663;MQ=70.56;MQ0=15;MQRankSum=-2.291;QD=14.91;ReadPosRankSum=0.624;VQSLOD=4.0467;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,0:7:8.99:100,9,0	./.	0/1:23,0:10:2.14:2,0,49	0/0:29,0:15:3.46:0,3,25	1/1:3,1:4:6.02:94,6,0	1/1:6,3:9:12.04:187,12,0	1/1:22,10:31:48.15:717,48,0	./.	1/1:5,0:15:17.24:146,17,0	1/1:5,1:6:3.01:47,3,0	1/1:3,2:5:6.02:92,6,0	1/1:15,3:18:18.05:261,18,0	0/0:12,0:12:18.06:0,18,403	1/1:9,12:20:14.84:234,15,0	1/1:9,7:16:30.10:467,30,0	1/1:13,5:18:24.08:370,24,0	1/1:13,9:22:27.09:421,27,0	1/1:7,3:10:15.03:210,15,0	1/1:15,3:18:12.04:175,12,0	./.	1/1:25,3:25:12.04:183,12,0	1/1:3,1:4:3.01:47,3,0	./.	0/0:31,0:31:45.12:0,45,971	1/1:3,1:4:3.01:47,3,0	1/1:4,2:6:6.02:94,6,0	1/1:12,9:20:30.07:443,30,0	1/1:3,1:4:3.01:47,3,0
chr10	64281982	.	T	TC	3036.78	PASS	AB=1.000;AC=41;AF=0.732;AN=56;BaseQRankSum=0.366;DP=468;FS=10.817;HRun=3;HaplotypeScore=75.9166;InbreedingCoeff=0.7765;MQ=69.18;MQ0=11;MQRankSum=1.298;QD=11.46;ReadPosRankSum=-0.123;VQSLOD=0.7439;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:17:26.96:0,27,159	1/1:5,1:6:17.96:165,18,0	0/0:65,0:23:33.37:0,33,307	0/0:66,0:25:31.79:0,32,282	1/1:8,0:8:20.81:183,21,0	1/1:11,1:11:20.66:168,21,0	1/1:15,1:16:14.97:140,15,0	0/1:17,0:16:22.12:22,0,189	0/0:10,0:11:6.67:0,7,22	1/1:13,0:13:31.82:285,32,0	1/1:6,1:7:14.94:137,15,0	1/1:19,0:19:8.14:74,8,0	0/0:11,0:11:26.95:0,27,232	1/1:17,1:17:27.64:202,28,0	1/1:19,0:19:23.98:239,24,0	1/1:17,0:17:17.99:181,18,0	1/1:22,0:22:26.92:233,27,0	1/1:10,0:10:18.02:177,18,0	1/1:13,0:13:35.16:320,35,0	1/1:6,0:5:3:25,3,0	1/1:15,0:15:10.57:121,11,0	1/1:5,0:5:8.85:60,9,0	0/0:6,0:6:14.99:0,15,127	0/0:25,0:25:56.95:0,57,535	1/1:8,0:8:3.01:34,3,0	1/1:13,0:12:27.98:274,28,0	1/1:18,0:18:14.99:134,15,0	1/1:3,0:3:6:57,6,0
chr10	64281985	.	C	CCTT	5915.39	PASS	AB=0.747;AC=44;AF=0.786;AN=56;BaseQRankSum=-0.763;DP=514;FS=19.398;HRun=0;HaplotypeScore=92.9894;InbreedingCoeff=0.7074;MQ=70.21;MQ0=11;MQRankSum=-0.428;QD=17.40;ReadPosRankSum=-0.842;VQSLOD=2.9964;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:13,0:26:66.94:176,0,67	1/1:3,3:9:17.27:344,17,0	0/0:63,0:25:41.14:0,41,487	0/0:65,0:24:30.75:0,31,332	1/1:8,0:9:18.64:188,19,0	1/1:6,2:10:23.21:290,23,0	1/1:7,9:21:20.96:304,21,0	0/1:13,0:15:60.72:61,0,173	1/1:13,0:16:12.09:153,12,0	1/1:2,13:16:17.01:353,17,0	1/1:4,1:7:14.94:192,15,0	1/1:4,9:23:12.47:187,12,0	0/0:11,0:12:32.83:0,33,307	1/1:13,3:18:35.52:371,36,0	1/1:3,11:21:24:402,24,0	1/1:3,8:17:20.47:300,20,0	1/1:9,12:24:33.43:487,33,0	1/1:2,7:14:18.03:288,18,0	1/1:3,1:16:44.12:471,44,0	1/1:3,0:4:6.01:63,6,0	1/1:2,12:17:13.75:183,14,0	1/1:2,4:7:17.80:156,18,0	0/0:5,0:6:18:0,18,175	0/0:20,0:25:57.79:0,58,709	1/1:0,8:8:3.01:72,3,0	1/1:2,5:12:35.79:463,36,0	1/1:4,11:16:14.84:219,15,0	1/1:5,0:6:16.22:190,16,0
chr10	64282112	.	C	CAA	3545.80	PASS	AB=0.900;AC=45;AF=0.804;AN=56;BaseQRankSum=-0.594;DP=430;FS=12.916;HRun=18;HaplotypeScore=97.7630;InbreedingCoeff=0.5001;MQ=64.60;MQ0=2;MQRankSum=-1.566;QD=9.69;ReadPosRankSum=-2.574;VQSLOD=-0.3251;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:27:15.44:0,15,63	1/1:2,0:2:3.01:33,3,0	0/0:19,0:9:6.90:0,7,35	0/1:13,0:9:6.32:6,0,44	1/1:17,0:17:19.36:159,19,0	1/1:14,1:17:30.01:283,30,0	0/1:12,1:21:4.59:23,0,5	1/1:24,0:23:14.62:194,15,0	1/1:9,0:9:17.95:153,18,0	1/1:12,0:12:20.25:164,20,0	1/1:12,0:14:21.53:170,22,0	1/1:12,1:13:15.09:136,15,0	0/0:6,0:6:5.66:0,6,41	1/1:26,0:26:38.18:326,38,0	1/1:9,0:9:13.22:111,13,0	1/1:15,0:14:17.97:163,18,0	1/1:21,0:22:30.57:276,31,0	1/1:7,13:21:18.49:178,18,0	1/1:9,0:10:9.95:88,10,0	1/1:5,4:10:12.47:117,12,0	1/1:10,0:14:3.48:34,3,0	1/1:12,0:12:11.98:104,12,0	0/0:8,0:10:0.04:0,0,41	0/1:14,0:14:12.58:13,0,32	1/1:15,0:15:23.24:243,23,0	1/1:11,0:21:28.42:217,28,0	1/1:12,0:11:20.91:179,21,0	1/1:14,0:16:22.30:176,22,0
chr10	64282123	.	AAAAAAAAC	A	417.76	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=-0.733;DP=414;FS=0.755;HRun=0;HaplotypeScore=105.3586;InbreedingCoeff=0.0838;MQ=66.87;MQ0=2;MQRankSum=0.852;QD=2.82;ReadPosRankSum=-5.295;VQSLOD=0.0096;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,23:25:21.68:441,22,0	0/0:4,0:4:9.03:0,9,240	0/1:22,0:10:29.63:30,0,367	0/0:16,0:11:12.84:0,13,435	0/0:16,0:15:42.04:0,42,990	0/0:17,0:17:48.15:0,48,1201	0/1:21,0:21:11.76:12,0,564	0/1:21,0:20:15.96:16,0,893	0/0:9,0:9:27.04:0,27,675	0/0:13,0:13:11.85:0,12,962	0/0:12,0:12:30.10:0,30,779	0/0:13,0:13:27.09:0,27,653	0/0:5,0:5:15.03:0,15,498	0/0:23,0:22:56:0,56,1481	0/1:10,0:10:26:26,0,492	0/1:12,0:11:16.08:16,0,521	0/0:20,0:20:46.29:0,46,1314	0/1:22,0:22:0.97:1,0,577	0/0:9,0:6:14.30:0,14,423	0/0:10,0:10:24.08:0,24,611	0/0:11,0:10:13.24:0,13,238	0/0:13,0:13:35.07:0,35,936	0/0:13,0:13:39.05:0,39,1131	0/0:15,0:15:42.62:0,43,1407	0/0:12,0:12:36.12:0,36,1013	0/0:24,0:23:30.13:0,30,1326	0/1:14,0:13:15.65:16,0,769	0/0:11,0:11:30.10:0,30,897
chr10	64282439	.	GTTGTT	G	2152.65	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.738;DP=702;FS=5.564;HRun=0;HaplotypeScore=134.2422;InbreedingCoeff=0.9996;MQ=65.64;MQ0=2;MQRankSum=-6.520;QD=23.15;ReadPosRankSum=-2.349;VQSLOD=2.8242;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,25:31:44.98:686,45,0	0/0:12,0:12:33.11:0,33,909	0/0:22,0:21:32.98:0,33,643	0/0:27,0:20:40.99:0,41,850	0/0:32,0:31:72.25:0,72,1963	0/0:22,0:22:54.17:0,54,1423	0/0:26,0:26:66.16:0,66,1798	1/1:15,19:34:57.17:979,57,0	1/1:9,19:28:33.11:631,33,0	0/0:31,0:31:84.29:0,84,2308	0/0:20,0:20:45.15:0,45,1307	0/0:29,0:29:81.28:0,81,2288	0/0:23,0:23:69.24:0,69,1954	0/0:19,0:19:51.18:0,51,1394	0/0:29,0:29:75.26:0,75,2069	0/0:13,0:13:33.11:0,33,951	0/0:32,0:32:75.26:0,75,2119	0/0:25,0:25:63.21:0,63,1763	0/0:22,0:22:45.14:0,45,1094	0/0:22,0:22:52.42:0,52,1453	0/0:25,0:25:60.15:0,60,1536	0/0:30,0:30:66.22:0,66,1771	0/0:19,0:19:48.15:0,48,1323	0/0:30,0:30:66.22:0,66,1885	0/0:21,0:21:48.16:0,48,1367	0/0:28,0:28:63.21:0,63,1698	0/0:31,0:31:78.27:0,78,2112	0/0:18,0:18:39.58:0,40,997
chr10	64283850	.	TTCTCTCTGTC	T	505.73	PASS	AC=2;AF=0.037;AN=54;BaseQRankSum=6.108;DP=636;FS=5.898;HRun=0;HaplotypeScore=209.7583;InbreedingCoeff=0.9412;MQ=70.08;MQ0=5;MQRankSum=-3.005;QD=18.06;ReadPosRankSum=-5.333;VQSLOD=0.8687;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:39.01:0,39,455	0/0:12,0:11:21.53:0,22,633	0/0:35,0:25:18.43:0,18,324	0/0:66,0:48:50.57:0,51,818	0/0:16,0:16:18.05:0,18,543	0/0:26,0:25:54.15:0,54,1803	0/0:23,0:23:42.10:0,42,1013	1/1:10,18:28:50.23:600,50,0	./.	0/0:23,0:22:39.07:0,39,1103	0/0:14,0:14:24.07:0,24,758	0/0:18,0:18:27.06:0,27,883	0/0:15,0:15:33.11:0,33,1031	0/0:23,0:22:36.11:0,36,1276	0/0:19,0:19:30.10:0,30,976	0/0:12,0:12:24.01:0,24,676	0/0:17,0:16:28.09:0,28,598	0/0:22,0:21:20.97:0,21,343	0/0:18,0:17:42.02:0,42,830	0/0:20,0:20:48.64:0,49,1740	0/0:34,0:33:46.90:0,47,1154	0/0:16,0:15:12.04:0,12,353	0/0:24,0:24:63.11:0,63,1800	0/0:34,0:34:75.26:0,75,2477	0/0:17,0:17:27.08:0,27,873	0/0:27,0:27:63.21:0,63,2035	0/0:18,0:16:33.09:0,33,1107	0/0:16,0:16:33.07:0,33,943
chr10	64283892	.	C	CTG	2759.69	PASS	AB=0.877;AC=35;AF=0.648;AN=54;BaseQRankSum=-7.964;DP=542;FS=2.940;HRun=0;HaplotypeScore=109.7462;InbreedingCoeff=0.3012;MQ=46.25;MQ0=28;MQRankSum=5.210;QD=6.92;ReadPosRankSum=1.314;VQSLOD=3.4226;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:18:11.92:0,12,90	1/1:7,0:7:1.63:63,2,0	./.	0/1:11,0:4:1.69:2,0,23	0/1:12,15:26:7.11:12,0,7	1/1:21,0:21:29.97:290,30,0	1/1:16,0:11:11.96:95,12,0	0/0:29,0:27:52.25:0,52,303	0/1:11,0:11:0:0,0,0	0/1:27,0:24:70.19:193,0,70	1/1:12,0:13:8.94:67,9,0	1/1:22,0:22:3.09:127,3,0	0/0:16,0:15:34.81:0,35,340	1/1:24,0:21:11.99:222,12,0	1/1:16,0:18:17.95:148,18,0	1/1:13,0:11:11.98:97,12,0	1/1:13,1:13:5.50:98,5,0	1/1:14,0:11:3.01:37,3,0	0/1:17,0:13:49.44:124,0,49	1/1:20,0:21:32.98:339,33,0	0/1:16,0:14:1.13:132,0,1	0/1:8,11:18:10.55:11,0,14	0/0:34,0:33:60.46:0,60,590	0/0:38,0:33:77.89:0,78,807	1/1:23,0:24:15:149,15,0	0/1:9,15:24:99:357,0,106	0/1:13,0:14:18.03:153,0,18	1/1:14,0:12:14.90:216,15,0
chr10	64283894	.	G	GTGTCTC	3768.58	PASS	AB=1.000;AC=36;AF=0.667;AN=54;BaseQRankSum=-5.925;DP=534;FS=1.014;HRun=0;HaplotypeScore=130.3840;InbreedingCoeff=0.4866;MQ=45.62;MQ0=30;MQRankSum=3.173;QD=9.81;ReadPosRankSum=-1.520;VQSLOD=2.2266;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:18:9.86:0,10,72	1/1:8,0:7:11.99:110,12,0	./.	0/0:10,0:4:3:0,3,28	0/1:25,0:24:7.10:13,0,7	1/1:24,0:22:34.18:361,34,0	1/1:15,0:10:11.96:95,12,0	0/0:27,0:25:31.40:0,31,242	0/1:11,0:11:0:0,0,0	0/1:27,0:23:63.72:245,0,64	1/1:12,0:12:8.94:67,9,0	1/1:21,0:21:24.99:195,25,0	0/0:18,0:16:35.04:0,35,556	1/1:25,0:21:29.54:251,30,0	1/1:19,0:17:19.33:152,19,0	1/1:12,0:10:11.98:97,12,0	1/1:14,1:13:14.55:167,15,0	1/1:2,11:12:3.01:78,3,0	0/1:18,0:12:22.22:148,0,22	1/1:22,0:22:34.40:487,34,0	1/1:15,0:14:17.95:163,18,0	0/1:18,0:17:6.42:33,0,6	0/0:32,0:30:61.28:0,61,821	0/0:38,0:33:81.03:0,81,1261	1/1:24,0:24:15:149,15,0	0/1:23,0:23:99:443,0,107	1/1:18,0:15:12.05:227,12,0	1/1:15,0:13:29.03:288,29,0
chr10	64283924	.	CTCTGTG	C	2761.18	PASS	AB=0.968;AC=28;AF=0.538;AN=52;BaseQRankSum=-2.315;DP=450;FS=5.626;HRun=0;HaplotypeScore=115.4914;InbreedingCoeff=0.1099;MQ=40.68;MQ0=37;MQRankSum=2.221;QD=8.63;ReadPosRankSum=-0.236;VQSLOD=1.9324;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:11:12.04:0,12,207	1/1:10,1:9:17.93:276,18,0	./.	./.	1/1:25,0:25:13.76:194,14,0	0/1:19,2:19:25.10:208,0,25	1/1:17,0:11:2.64:37,3,0	0/0:18,0:15:14.60:0,15,85	0/0:9,0:9:3.01:0,3,48	0/1:19,0:16:46.63:47,0,96	0/0:11,0:11:0.47:0,0,1	1/1:22,0:19:20.61:267,21,0	0/0:18,0:16:15.14:0,15,380	0/1:23,1:19:12.74:104,0,13	1/1:18,1:17:9.96:139,10,0	1/1:8,0:6:2.70:45,3,0	0/1:18,0:16:4.55:168,0,5	0/1:10,0:8:7:81,0,7	0/1:12,0:8:17.88:23,0,18	0/1:13,1:14:56.92:110,0,57	1/1:15,0:12:7.04:128,7,0	1/1:18,0:17:17.45:211,17,0	0/0:20,0:17:5.60:0,6,574	0/0:37,0:30:22.40:0,22,950	1/1:26,0:26:5.65:355,6,0	0/1:21,0:21:99:357,0,109	0/1:11,1:10:2.36:128,0,2	0/1:7,0:6:27.03:49,0,27
chr10	64283926	.	CTG	C	1518.91	PASS	AB=0.970;AC=39;AF=0.780;AN=50;BaseQRankSum=4.204;DP=451;FS=1.926;HRun=0;HaplotypeScore=100.5539;InbreedingCoeff=0.3587;MQ=40.35;MQ0=37;MQRankSum=0.269;QD=4.09;ReadPosRankSum=-1.882;VQSLOD=2.1368;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:11:3.96:0,4,77	1/1:11,0:9:17.77:119,18,0	./.	./.	1/1:23,0:23:17.71:131,18,0	1/1:22,1:21:21.26:140,21,0	1/1:11,7:12:2.74:18,3,0	./.	0/0:9,0:9:5.99:0,6,48	1/1:17,0:15:5.42:27,5,0	0/0:8,0:11:0:0,0,0	1/1:21,0:18:15.32:153,15,0	0/0:18,0:16:14.02:0,14,104	1/1:23,0:18:8.55:55,9,0	0/1:18,0:18:2.16:69,0,2	1/1:8,0:6:2.56:21,3,0	1/1:19,0:16:14.74:91,15,0	1/1:10,0:8:7.51:47,8,0	1/1:12,0:8:2.97:20,3,0	1/1:13,1:14:8.69:58,9,0	1/1:14,0:12:8.92:62,9,0	1/1:17,0:16:20.69:150,21,0	0/1:19,0:16:9.59:10,0,130	0/1:37,0:30:53.41:53,0,284	1/1:26,0:26:26.74:189,27,0	1/1:18,0:19:23.74:159,24,0	1/1:11,0:10:8.91:61,9,0	1/1:7,0:6:2.98:21,3,0
chr10	64289093	.	A	AG	1759.36	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=-7.237;DP=582;FS=2.480;HRun=7;HaplotypeScore=57.3093;InbreedingCoeff=0.8929;MQ=74.67;MQ0=0;MQRankSum=-2.202;QD=22.56;ReadPosRankSum=-0.888;VQSLOD=2.9783;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,25:29:66.20:794,66,0	0/1:9,0:9:0.95:1,0,101	0/0:15,0:14:24.17:0,24,191	0/0:20,0:19:22.13:0,22,281	0/0:22,0:22:54.08:0,54,521	0/0:19,0:19:45.07:0,45,435	0/0:20,0:20:51.08:0,51,492	1/1:2,18:20:54.12:636,54,0	1/1:4,16:20:39.12:471,39,0	0/0:21,0:21:60.10:0,60,579	0/0:18,0:18:51.06:0,51,485	0/0:23,0:23:63.10:0,63,608	0/0:17,0:17:48.08:0,48,464	0/0:25,0:25:69.11:0,69,666	0/0:19,0:19:54.09:0,54,521	0/0:14,0:14:42.07:0,42,406	0/0:40,0:40:99:0,102,985	0/0:13,0:13:30.05:0,30,290	0/0:19,0:19:51.08:0,51,492	0/0:26,0:26:66.10:0,66,637	0/0:30,0:30:78.12:0,78,753	0/0:18,0:18:39.05:0,39,374	0/0:16,0:16:42.05:0,42,400	0/0:28,0:28:78.12:0,78,752	0/0:21,0:21:51.07:0,51,492	0/0:32,0:32:84.13:0,84,808	0/0:18,0:18:48.07:0,48,463	0/0:7,0:7:12.01:0,12,116
chr10	64291748	.	CTTGTTTGT	C	19348.51	PASS	AB=0.632;AC=44;AF=0.786;AN=56;BaseQRankSum=10.068;DP=656;FS=3.800;HRun=0;HaplotypeScore=175.6095;InbreedingCoeff=0.7900;MQ=58.89;MQ0=3;MQRankSum=-9.423;QD=36.37;ReadPosRankSum=2.608;VQSLOD=4.5827;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,15:30:39.13:995,39,0	1/1:4,7:11:13.77:374,14,0	0/0:30,0:24:15.05:0,15,479	0/0:30,0:25:33.03:0,33,948	1/1:2,12:14:27.09:664,27,0	1/1:8,22:30:54.19:1369,54,0	0/1:12,14:26:36.53:585,0,37	1/1:21,10:31:30.05:507,30,0	1/1:9,19:28:48.16:1220,48,0	1/1:12,12:24:36.09:814,36,0	1/1:5,13:18:30.10:696,30,0	1/1:11,19:30:48.16:1225,48,0	0/0:19,0:19:45.12:0,45,1752	1/1:5,16:21:36.12:918,36,0	1/1:8,23:31:57.20:1446,57,0	1/1:8,19:27:40.86:1065,41,0	1/1:13,19:32:35.96:890,36,0	0/1:10,17:27:4.01:554,0,4	1/1:10,12:22:33.08:785,33,0	1/1:2,22:24:60.20:1350,60,0	1/1:14,3:17:9.07:239,9,0	1/1:3,8:11:15.05:383,15,0	0/0:14,0:14:24.08:0,24,964	0/0:31,0:31:84.29:0,84,3265	1/1:3,15:18:39.13:981,39,0	1/1:13,18:31:54.16:1143,54,0	1/1:9,12:20:30.10:762,30,0	1/1:3,5:8:15.05:383,15,0
chr10	64294343	.	C	CAAAAATG	1728.66	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=0.731;DP=629;FS=3.227;HRun=0;HaplotypeScore=144.5545;InbreedingCoeff=0.8161;MQ=67.30;MQ0=0;MQRankSum=-5.772;QD=44.32;ReadPosRankSum=-1.024;VQSLOD=3.2676;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,24:39:51.03:1823,51,0	0/0:7,0:7:18.06:0,18,400	0/0:7,0:7:6.01:0,6,113	0/0:17,0:16:5.99:0,6,290	0/0:17,0:17:39.12:0,39,811	0/0:20,0:20:51.18:0,51,1172	0/0:17,0:17:24.07:0,24,491	0/0:34,0:34:54.17:0,54,1108	0/0:14,0:14:33.10:0,33,725	0/0:19,0:19:48.16:0,48,1080	0/0:15,0:15:30.10:0,30,680	0/0:29,0:29:72.23:0,72,1579	0/0:31,0:31:72.25:0,72,1616	0/0:37,0:37:96.27:0,96,2023	0/0:35,0:35:90.31:0,90,2103	0/0:20,0:20:51.17:0,51,1073	0/0:21,0:21:48.15:0,48,1056	0/0:14,0:14:33.11:0,33,750	0/0:25,0:25:39.13:0,39,854	0/0:24,0:24:51.15:0,51,1041	0/0:29,0:29:69.19:0,69,1524	0/0:13,0:13:24.08:0,24,540	0/0:17,0:17:39.13:0,39,889	0/0:38,0:38:90.27:0,90,1988	0/0:22,0:22:42.12:0,42,934	0/0:25,0:25:54.18:0,54,1204	0/0:22,0:22:51.18:0,51,1192	0/0:21,0:21:63.22:0,63,1356
chr10	64295862	.	CTGAA	C	11997.54	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=9.038;DP=661;FS=5.356;HRun=0;HaplotypeScore=125.6158;InbreedingCoeff=0.9216;MQ=73.11;MQ0=0;MQRankSum=2.809;QD=23.71;ReadPosRankSum=2.103;VQSLOD=4.4701;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,0:29:28.25:180,28,0	1/1:4,6:10:15.05:238,15,0	0/0:22,0:21:12.04:0,12,224	0/0:21,0:22:9:0,9,214	1/1:9,17:26:45.15:714,45,0	1/1:9,7:16:6.02:95,6,0	1/1:10,13:23:27.09:429,27,0	0/0:27,0:27:24.08:0,24,477	1/1:3,12:15:30.10:474,30,0	1/1:9,18:27:60.17:881,60,0	1/1:2,15:17:33.11:524,33,0	1/1:8,15:23:36.12:572,36,0	0/0:32,0:32:69.22:0,69,1566	1/1:9,19:28:48.16:762,48,0	1/1:13,18:31:45.15:714,45,0	1/1:11,22:34:57.19:883,57,0	1/1:5,16:21:45.15:714,45,0	1/1:4,11:15:30.10:476,30,0	1/1:16,8:24:24.08:381,24,0	1/1:9,17:26:48.16:762,48,0	1/1:11,16:27:35.14:570,35,0	1/1:3,12:15:21.07:333,21,0	0/0:21,0:21:45.09:0,45,1021	0/0:31,0:31:60.20:0,60,1262	1/1:13,23:36:51.17:810,51,0	1/1:12,19:31:60.19:915,60,0	1/1:10,15:25:32.94:524,33,0	1/1:5,2:7:3.01:48,3,0
chr10	64296499	.	G	GAGAC	881.09	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.478;DP=674;FS=0.926;HRun=0;HaplotypeScore=116.5772;InbreedingCoeff=0.9195;MQ=63.83;MQ0=0;MQRankSum=-2.652;QD=18.75;ReadPosRankSum=-1.521;VQSLOD=3.1048;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:14,9:25:20.67:449,21,0	0/0:11,0:11:33.11:0,33,539	0/0:24,0:21:14.88:0,15,303	0/0:26,0:23:21.30:0,21,638	0/0:24,0:24:54.18:0,54,870	0/0:20,0:20:36.10:0,36,564	0/0:39,0:41:78.21:0,78,1180	0/0:24,0:24:36.12:0,36,563	1/1:12,10:22:24.08:551,24,0	0/0:30,0:30:69.23:0,69,1097	0/0:3,0:3:6.02:0,6,99	0/0:41,0:41:96.29:0,96,1491	0/0:23,0:23:48.15:0,48,763	0/0:25,0:25:48.16:0,48,789	0/0:37,0:37:72.23:0,72,1158	0/0:33,0:33:72.25:0,72,1173	0/0:33,0:33:75.26:0,75,1227	0/0:15,0:15:30.10:0,30,493	0/0:15,0:15:27.06:0,27,365	0/0:18,0:18:30.10:0,30,493	0/0:39,0:40:99:0,108,1634	0/0:17,0:17:24.08:0,24,391	0/0:21,0:21:45.14:0,45,697	0/0:29,0:29:75.26:0,75,1233	0/0:24,0:24:36.11:0,36,567	0/0:27,0:27:56.40:0,56,872	0/0:21,0:21:51.17:0,51,836	0/0:5,0:5:12.04:0,12,193
chr10	64297325	.	CA	C	611.72	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.426;DP=654;FS=0.881;HRun=3;HaplotypeScore=59.0236;InbreedingCoeff=0.9992;MQ=70.84;MQ0=0;MQRankSum=0.096;QD=29.13;ReadPosRankSum=2.411;VQSLOD=3.0861;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,111,1598	0/0:11,0:11:33.11:0,33,474	0/0:14,0:13:38.14:0,38,492	0/0:15,0:15:42.13:0,42,577	0/0:40,0:40:99:0,111,1543	0/0:23,0:23:69.23:0,69,991	0/0:16,0:16:45.14:0,45,625	0/0:33,0:33:96.31:0,96,1336	1/1:0,21:21:57.18:707,57,0	0/0:29,0:29:87.28:0,87,1230	0/0:18,0:18:54.18:0,54,773	0/0:25,0:25:75.25:0,75,1075	0/0:24,0:24:72.24:0,72,1035	0/0:17,0:17:51.17:0,51,732	0/0:39,0:38:99:0,114,1617	0/0:36,0:36:99:0,102,1448	0/0:15,0:15:45.12:0,45,627	0/0:19,0:19:57.19:0,57,816	0/0:34,0:34:99:0,99,1414	0/0:23,0:23:66.22:0,66,948	0/0:20,0:20:60.19:0,60,843	0/0:15,0:15:39.13:0,39,558	0/0:20,0:20:60.20:0,60,861	0/0:25,0:25:75.25:0,75,1079	0/0:13,0:13:39.13:0,39,562	0/0:25,0:25:75.25:0,75,1078	0/0:36,0:35:99:0,102,1462	0/0:11,0:11:33.11:0,33,473
chr10	64298087	.	CA	C	2579.55	PASS	AB=0.705;AC=38;AF=0.679;AN=56;BaseQRankSum=-3.284;DP=579;FS=12.795;HRun=16;HaplotypeScore=93.8582;InbreedingCoeff=0.2296;MQ=66.52;MQ0=9;MQRankSum=3.782;QD=5.77;ReadPosRankSum=5.408;VQSLOD=1.2979;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:17:0,17,102	0/1:5,6:11:10.43:57,0,10	1/1:23,0:11:0.35:1,0,0	0/0:30,1:15:2.02:0,2,7	1/1:7,11:19:29.17:179,29,0	1/1:7,8:16:0.41:106,0,0	1/1:11,12:27:17.13:183,17,0	0/0:29,1:29:15.48:0,15,263	1/1:9,0:15:18.68:63,19,0	1/1:12,10:23:27.29:155,27,0	0/1:7,9:19:25.52:123,0,26	0/1:23,5:28:50.57:65,0,51	0/1:12,2:14:24.03:24,0,134	0/1:10,5:15:11.28:42,0,11	0/1:16,9:26:26.31:71,0,26	1/1:7,12:20:34.07:203,34,0	1/1:10,21:33:2.55:217,3,0	1/1:9,15:26:36.23:209,36,0	1/1:10,5:14:19.48:111,19,0	0/1:4,7:11:26.79:84,0,27	1/1:7,11:18:28.83:178,29,0	0/1:3,7:12:0.53:95,0,1	0/0:15,1:16:13.07:0,13,194	0/0:20,2:24:6.32:0,6,246	1/1:7,7:17:27.36:155,27,0	1/1:10,15:27:38.94:226,39,0	1/1:8,8:17:1.85:74,2,0	1/1:4,7:12:22.47:129,22,0
chr10	64298104	.	G	GA	845.61	PASS	AB=0.867;AC=5;AF=0.089;AN=56;BaseQRankSum=6.788;DP=694;FS=4.743;HRun=16;HaplotypeScore=108.4868;InbreedingCoeff=0.3800;MQ=67.72;MQ0=13;MQRankSum=-1.844;QD=4.89;ReadPosRankSum=-2.574;VQSLOD=1.5044;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:20,9:29:18.24:306,18,0	0/0:6,0:6:14.99:0,15,148	0/1:50,0:19:1.02:1,0,221	0/1:51,1:25:51.08:51,0,73	0/0:27,0:27:69.18:0,69,799	0/0:13,0:13:33.02:0,33,351	0/0:27,0:27:71.99:0,72,808	0/1:18,20:37:99:602,0,213	0/0:20,0:20:56.64:0,57,588	0/0:27,0:26:69.20:0,69,806	0/0:22,0:23:56.57:0,57,604	0/0:25,0:25:69.14:0,69,755	0/0:18,0:18:53.71:0,54,588	0/0:17,0:17:37.17:0,37,363	0/0:22,0:22:46.34:0,46,479	0/0:22,0:21:57.13:0,57,640	0/0:42,0:42:74.75:0,75,964	0/0:24,0:24:54:0,54,586	0/0:19,0:18:42.05:0,42,457	0/0:16,0:16:48.11:0,48,522	0/0:17,0:17:47.12:0,47,496	0/0:14,0:14:41.69:0,42,447	0/0:19,0:19:48.06:0,48,564	0/0:33,0:31:68.73:0,69,813	0/0:21,0:21:56.83:0,57,623	0/0:32,0:32:96.15:0,96,1100	0/0:24,0:23:54.13:0,54,601	0/0:13,0:13:32.39:0,32,386
chr10	64298123	.	A	AAAAAC	703.51	PASS	AB=0.643;AC=1;AF=0.018;AN=56;BaseQRankSum=2.719;DP=697;FS=3.822;HRun=0;HaplotypeScore=163.4234;InbreedingCoeff=-0.0189;MQ=71.16;MQ0=12;MQRankSum=-4.949;QD=26.06;ReadPosRankSum=-1.318;VQSLOD=3.2897;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:12,11:27:19.13:778,0,19	0/0:3,0:3:2.96:0,3,55	0/0:54,0:22:3.45:0,3,99	0/0:57,0:29:9.11:0,9,131	0/0:25,0:25:54.18:0,54,993	0/0:16,0:16:26.99:0,27,390	0/0:28,0:28:36.11:0,36,631	0/0:41,0:40:34.92:0,35,565	0/0:25,0:25:57.18:0,57,1001	0/0:30,0:30:60.21:0,60,1098	0/0:18,0:18:39.13:0,39,684	0/0:26,0:26:51.17:0,51,919	0/0:18,0:18:27.01:0,27,427	0/0:18,0:18:39.13:0,39,717	0/0:19,0:19:27.09:0,27,484	0/0:23,0:22:54.19:0,54,988	0/0:40,0:40:65.76:0,66,1163	0/0:20,0:20:29.82:0,30,476	0/0:16,0:16:24.03:0,24,378	0/0:17,0:17:30.10:0,30,548	0/0:21,0:21:33.46:0,33,681	0/0:18,0:18:42.12:0,42,708	0/0:16,0:16:33.10:0,33,561	0/0:33,0:32:69.19:0,69,1268	0/0:15,0:15:33.10:0,33,578	0/0:35,0:35:66.13:0,66,1142	0/0:18,0:18:39.13:0,39,711	0/0:19,0:19:48.16:0,48,882
chr10	64298351	.	T	TA	7219.93	PASS	AB=0.784;AC=40;AF=0.714;AN=56;BaseQRankSum=-10.224;DP=553;FS=3.364;HRun=12;HaplotypeScore=66.2694;InbreedingCoeff=0.6282;MQ=73.07;MQ0=1;MQRankSum=-0.478;QD=17.27;ReadPosRankSum=-0.755;VQSLOD=5.8218;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:28:75.66:0,76,537	1/1:0,5:5:12.02:117,12,0	0/0:19,0:16:14.74:0,15,103	0/1:29,0:25:14.71:15,0,133	1/1:5,14:19:14.15:299,14,0	0/1:9,13:22:26.65:253,0,27	1/1:1,19:20:32.18:474,32,0	0/0:2,0:19:26.24:0,26,76	0/0:12,0:13:31.84:0,32,223	1/1:7,17:24:51.06:486,51,0	0/1:5,11:16:26.67:253,0,27	1/1:4,12:16:14.15:299,14,0	0/0:21,1:22:30.49:0,30,386	1/1:5,22:27:42.29:564,42,0	1/1:2,14:16:27.04:263,27,0	1/1:3,22:25:63.10:613,63,0	1/1:4,21:25:54.56:527,55,0	1/1:3,14:17:14.15:299,14,0	1/1:1,9:10:24.03:228,24,0	1/1:8,17:25:10.16:402,10,0	1/1:2,11:13:5.13:212,5,0	1/1:1,10:10:18.03:175,18,0	0/1:9,1:11:0.33:0,0,150	0/0:32,0:34:82.95:0,83,595	1/1:2,18:21:49.16:455,49,0	1/1:5,20:25:54.07:519,54,0	1/1:4,18:23:45.07:437,45,0	1/1:6,12:18:1.25:330,1,0
chr10	64298731	.	CTTCTTCTTCTT	C	503.75	PASS	AB=0.529;AC=1;AF=0.018;AN=56;BaseQRankSum=5.258;DP=495;FS=0.000;HRun=0;HaplotypeScore=149.3785;InbreedingCoeff=-0.0212;MQ=58.34;MQ0=6;MQRankSum=-1.696;QD=27.99;ReadPosRankSum=-2.982;VQSLOD=2.6904;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:60.16:0,60,2450	0/0:6,0:6:10.26:0,10,215	0/0:21,0:7:14.71:0,15,398	0/0:15,0:8:21.05:0,21,571	0/0:16,0:16:45.15:0,45,1798	0/0:13,0:13:33.10:0,33,1113	0/0:17,0:17:42.07:0,42,1325	0/1:2,16:18:74.44:578,0,74	0/0:18,0:18:21.07:0,21,914	0/0:20,0:20:52.88:0,53,1487	0/0:13,0:13:28.33:0,28,1052	0/0:18,0:18:46.68:0,47,1363	0/0:13,0:12:33.11:0,33,1451	0/0:15,0:15:33.94:0,34,1092	0/0:10,0:10:18.06:0,18,769	0/0:18,0:18:48.04:0,48,1877	0/0:28,0:28:29.95:0,30,594	0/0:21,0:21:41.36:0,41,1624	0/0:22,0:20:48.50:0,49,1396	0/0:15,0:15:37.01:0,37,1500	0/0:23,0:22:45.12:0,45,1603	0/0:14,0:14:33.04:0,33,1030	0/0:9,0:9:21.05:0,21,592	0/0:24,0:24:61.05:0,61,2741	0/0:14,0:14:33.04:0,33,822	0/0:18,0:18:43.69:0,44,1830	0/0:31,0:31:67.13:0,67,2110	0/0:21,0:21:51.17:0,51,1455
chr10	64298740	.	C	CT	2487.36	PASS	AB=0.769;AC=36;AF=0.643;AN=56;BaseQRankSum=0.196;DP=598;FS=5.088;HRun=15;HaplotypeScore=92.6426;InbreedingCoeff=0.0547;MQ=58.56;MQ0=6;MQRankSum=0.109;QD=4.83;ReadPosRankSum=-2.580;VQSLOD=1.7171;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,1:28:37.55:0,38,226	0/1:6,3:9:4.17:66,0,4	0/0:19,0:6:5.49:0,5,35	0/1:15,0:7:0:0,0,0	0/0:22,1:24:2:0,2,150	1/1:9,11:20:8.99:76,9,0	0/1:7,8:17:0.15:95,0,0	0/1:18,0:20:2.17:23,0,2	1/1:4,17:21:11.98:101,12,0	1/1:14,13:27:11.70:167,12,0	1/1:6,9:15:3.25:121,3,0	0/1:11,16:27:3.46:170,0,3	0/1:17,0:16:8.32:8,0,42	1/1:21,1:22:37.11:263,37,0	0/1:3,10:13:9.01:41,0,9	1/1:17,7:25:19.55:254,20,0	1/1:9,3:36:6.18:33,6,0	1/1:10,23:33:0.38:210,0,0	1/1:20,3:21:21.85:174,22,0	1/1:12,7:21:13.53:218,14,0	0/1:11,13:24:33.27:67,0,33	1/1:3,12:15:20.82:165,21,0	0/0:12,0:12:1.11:0,1,76	0/1:27,1:28:7.10:7,0,163	0/1:6,9:16:7.26:44,0,7	0/1:14,11:25:23.63:132,0,24	0/1:14,11:26:36.15:154,0,36	1/1:12,7:19:5.99:50,6,0
chr10	64299117	.	CTGTAGACCAGGCTAGCCT	C	1068.45	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.206;DP=650;FS=1.259;HRun=0;HaplotypeScore=294.8400;InbreedingCoeff=0.9976;MQ=59.36;MQ0=3;MQRankSum=-2.025;QD=66.78;ReadPosRankSum=-1.464;VQSLOD=2.2209;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,102,8233	0/0:11,0:11:30.10:0,30,2451	0/0:19,0:12:36.04:0,36,1531	0/0:26,0:21:43.36:0,43,2107	0/0:24,0:24:63.22:0,63,5213	0/0:12,0:12:30.10:0,30,2471	0/0:26,0:26:75.26:0,75,6124	1/1:7,9:15:27.08:1162,27,0	0/0:21,0:21:63.20:0,63,4510	0/0:29,0:29:84.27:0,84,6199	0/0:14,0:14:42.10:0,42,3334	0/0:23,0:23:69.21:0,69,5104	0/0:25,0:25:72.25:0,72,5699	0/0:19,0:19:57.18:0,57,4458	0/0:20,0:20:60.21:0,60,4320	0/0:30,0:30:87.30:0,87,7261	0/0:33,0:33:96.33:0,96,8191	0/0:34,0:34:99:0,102,7866	0/0:27,0:26:69.23:0,69,5181	0/0:22,0:22:57.16:0,57,3734	0/0:38,0:38:99:0,108,9056	0/0:28,0:28:72.25:0,72,5814	0/0:17,0:17:51.16:0,51,3761	0/0:33,0:33:95.52:0,96,7494	0/0:15,0:15:45.15:0,45,3044	0/0:23,0:23:69.24:0,69,5732	0/0:19,0:18:57.20:0,57,4782	0/0:12,0:12:36.12:0,36,3146
chr10	64300501	.	TGGG	T	12426.93	PASS	AB=0.784;AC=44;AF=0.786;AN=56;BaseQRankSum=-7.852;DP=574;FS=7.531;HRun=12;HaplotypeScore=105.5156;InbreedingCoeff=0.7068;MQ=67.31;MQ0=1;MQRankSum=-1.635;QD=24.66;ReadPosRankSum=6.320;VQSLOD=3.3553;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,26:31:58.75:754,59,0	1/1:3,9:12:27.04:337,27,0	0/0:13,0:12:4.05:0,4,185	0/1:17,0:16:30.75:31,0,200	1/1:1,15:16:36.11:455,36,0	1/1:3,16:20:53.20:660,53,0	1/1:5,18:23:54.16:682,54,0	0/1:7,2:18:5.65:60,0,6	0/0:3,0:13:11.21:0,11,24	1/1:5,16:21:48.09:592,48,0	1/1:5,10:15:27.04:320,27,0	1/1:5,22:28:55.70:716,56,0	0/0:9,0:10:2.99:0,3,23	1/1:4,18:23:54.10:663,54,0	1/1:3,20:23:57.13:702,57,0	1/1:6,23:29:60.16:757,60,0	1/1:5,22:28:57.15:720,57,0	1/1:4,23:27:60.16:752,60,0	1/1:5,10:15:30.05:363,30,0	1/1:3,15:18:39.09:490,39,0	1/1:5,28:33:62.98:778,63,0	1/1:4,17:22:45.01:530,45,0	0/0:11,0:13:13.20:0,13,134	0/0:18,0:19:11.52:0,12,186	1/1:5,14:19:32.67:415,33,0	1/1:11,20:31:60.07:742,60,0	1/1:2,16:18:39.10:492,39,0	1/1:2,14:16:33.09:417,33,0
chr10	64300511	.	GGGT	G	5078.48	PASS	AB=0.977;AC=26;AF=0.464;AN=56;BaseQRankSum=8.604;DP=567;FS=17.602;HRun=0;HaplotypeScore=125.6975;InbreedingCoeff=-0.2700;MQ=69.47;MQ0=1;MQRankSum=-0.892;QD=10.34;ReadPosRankSum=13.754;VQSLOD=1.1374;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:33:61.80:334,0,62	0/1:13,0:13:35.93:105,0,36	0/0:14,0:12:20.42:0,20,304	0/1:17,0:17:45.56:46,0,360	1/1:16,0:16:16.17:220,16,0	0/1:21,2:23:35.56:250,0,36	0/1:24,1:25:72.77:289,0,73	0/0:22,0:22:23.98:0,24,313	0/0:13,0:13:32.61:0,33,174	0/1:20,0:20:23.64:235,0,24	1/1:10,2:12:24.48:213,24,0	0/1:27,1:28:36.33:351,0,36	0/0:5,0:5:6.38:0,6,48	1/1:21,1:22:14.79:321,15,0	0/1:26,0:26:24.69:274,0,25	0/1:26,1:27:3.87:299,0,4	0/1:27,1:28:5.59:272,0,6	0/1:26,0:26:16.47:233,0,16	0/1:20,0:20:85.32:85,0,199	1/1:17,1:18:2.72:204,3,0	0/1:32,1:33:25.71:236,0,26	0/1:22,0:22:43.23:194,0,43	0/0:9,0:9:21.16:0,21,213	0/0:13,0:12:20.90:0,21,270	0/1:16,1:17:10.16:203,0,10	0/1:26,0:26:47.21:306,0,47	0/1:19,1:20:4.70:261,0,5	0/1:17,0:17:29.10:147,0,29
chr10	64303606	.	T	TTCTCTCTCTCTCTC	7192.56	PASS	AC=42;AF=0.778;AN=54;BaseQRankSum=-1.071;DP=605;FS=10.085;HRun=0;HaplotypeScore=158.0961;InbreedingCoeff=0.5987;MQ=52.84;MQ0=24;MQRankSum=-2.474;QD=17.76;ReadPosRankSum=-3.296;VQSLOD=2.4568;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:23:0.39:0,0,1	./.	0/0:52,0:17:18.06:0,18,378	0/0:63,0:18:9.03:0,9,245	1/1:15,0:16:7.74:122,8,0	1/1:5,10:21:3.01:134,3,0	1/1:12,0:26:3.01:91,3,0	1/1:35,0:34:48.15:1147,48,0	1/1:4,0:16:6.02:214,6,0	1/1:10,0:19:27.08:1012,27,0	1/1:17,0:17:9.45:121,9,0	1/1:8,0:24:3.01:127,3,0	0/0:19,0:19:40.98:0,41,1279	1/1:13,0:12:3.01:126,3,0	1/1:12,0:30:4.42:55,4,0	1/1:6,13:25:2.74:92,3,0	1/1:3,4:11:3.01:92,3,0	1/1:24,0:22:9.03:274,9,0	1/1:8,0:16:24.08:849,24,0	1/1:4,0:4:2.97:20,3,0	1/1:28,0:29:10.40:131,10,0	1/1:11,0:11:3.01:50,3,0	0/0:10,0:9:16.87:0,17,556	0/0:27,0:28:47.22:0,47,1500	1/1:13,0:13:15.05:319,15,0	1/1:6,0:21:50.58:1277,51,0	1/1:23,0:21:37.28:847,37,0	1/1:6,0:5:5.98:93,6,0
chr10	64306023	.	AGGG	A	7733.29	PASS	AB=1.000;AC=39;AF=0.696;AN=56;BaseQRankSum=-4.970;DP=454;FS=2.086;HRun=12;HaplotypeScore=80.0591;InbreedingCoeff=0.8493;MQ=60.61;MQ0=10;MQRankSum=-0.252;QD=22.42;ReadPosRankSum=3.285;VQSLOD=3.8698;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:24:14.68:0,15,32	1/1:0,3:3:6.02:74,6,0	0/1:32,0:11:2.48:2,0,68	0/0:20,0:6:6.49:0,6,82	1/1:8,15:23:36.09:447,36,0	1/1:3,14:17:39.12:492,39,0	1/1:8,10:18:21.05:265,21,0	0/0:7,0:16:13.35:0,13,29	0/0:2,0:9:7.48:0,7,16	1/1:2,14:16:33.09:416,33,0	0/0:7,0:12:6.23:0,6,13	1/1:4,13:17:33.07:417,33,0	0/0:9,0:11:19.31:0,19,343	1/1:4,12:15:27.07:339,27,0	1/1:6,9:14:21.05:265,21,0	1/1:4,19:23:45.12:568,45,0	1/1:2,22:24:54.15:682,54,0	1/1:5,11:15:33.09:415,33,0	1/1:6,9:16:27.05:339,27,0	1/1:4,16:20:48.11:605,48,0	1/1:2,8:10:21.01:247,21,0	1/1:2,6:8:21.07:265,21,0	0/0:8,0:8:9.01:0,9,118	0/0:2,0:5:9.01:0,9,127	1/1:7,15:22:45.13:567,45,0	1/1:8,11:18:27.06:341,27,0	1/1:1,25:25:66.21:834,66,0	1/1:0,4:4:12.04:152,12,0
chr10	64306033	.	GGGT	G	2742.05	PASS	AB=0.971;AC=25;AF=0.446;AN=56;BaseQRankSum=9.749;DP=465;FS=0.861;HRun=0;HaplotypeScore=99.1586;InbreedingCoeff=-0.0586;MQ=59.72;MQ0=23;MQRankSum=1.691;QD=7.79;ReadPosRankSum=10.267;VQSLOD=1.3377;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:24:50.96:0,51,317	0/1:4,0:4:6.13:28,0,6	0/1:37,0:12:0:0,0,105	0/0:24,0:4:6.89:0,7,93	0/1:20,3:21:2.24:263,0,2	1/1:15,1:16:16.97:162,17,0	0/1:13,0:13:19.38:78,0,19	0/0:21,0:15:40.45:0,40,195	0/0:9,0:9:9.81:0,10,86	0/1:18,0:16:5.72:141,0,6	0/0:10,0:10:18.58:0,19,126	0/1:17,0:17:60.36:133,0,60	0/0:9,0:9:20.66:0,21,378	1/1:14,2:15:0.78:185,1,0	0/1:12,0:11:21.73:94,0,22	1/1:20,0:20:23.38:229,23,0	1/1:23,0:23:13.10:232,13,0	1/1:13,0:12:9.42:142,9,0	0/1:15,0:12:17.26:107,0,17	0/1:21,1:22:65.73:258,0,66	0/1:12,0:12:26.68:61,0,27	0/1:9,1:10:38.59:105,0,39	0/0:8,0:8:14.90:0,15,160	0/0:6,0:6:12.01:0,12,148	0/1:20,3:23:21.66:240,0,22	0/1:14,1:14:21.70:133,0,22	0/1:31,0:30:37.56:305,0,38	0/1:12,0:12:18.72:19,0,139
chr10	64306831	.	T	TC	350.37	PASS	AB=0.817;AC=4;AF=0.071;AN=56;BaseQRankSum=-0.318;DP=439;FS=0.000;HRun=9;HaplotypeScore=50.9779;InbreedingCoeff=0.4292;MQ=80.17;MQ0=0;MQRankSum=0.269;QD=7.62;ReadPosRankSum=-1.565;VQSLOD=0.4215;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:65.81:0,66,557	0/0:4,0:4:12:0,12,104	0/0:12,0:12:13.93:0,14,94	0/1:16,0:15:17.81:26,0,18	0/0:8,0:8:14.96:0,15,124	0/0:15,0:15:35.99:0,36,313	0/0:28,0:30:46.57:0,47,530	1/1:6,5:11:15.03:157,15,0	0/1:8,10:19:16.06:280,0,16	0/0:11,0:11:20.97:0,21,182	0/0:6,0:6:12.39:0,12,96	0/0:29,0:31:67.02:0,67,556	0/0:17,0:17:44.99:0,45,390	0/0:18,0:18:50.98:0,51,443	0/0:12,0:12:26.95:0,27,231	0/0:14,0:14:35.97:0,36,310	0/0:26,0:26:65.97:0,66,573	0/0:25,0:25:68.97:0,69,599	0/0:9,0:11:25.06:0,25,194	0/0:6,0:6:17.98:0,18,152	0/0:27,0:27:65.97:0,66,572	0/0:11,0:11:23.88:0,24,194	0/0:7,0:7:14.97:0,15,130	0/0:25,0:25:68.97:0,69,599	0/0:7,0:7:20.79:0,21,169	0/0:21,0:21:38.90:0,39,325	0/0:11,0:11:29.99:0,30,260	0/0:11,0:11:20.98:0,21,182
chr10	64308686	.	T	TCAC	2069.50	PASS	AB=0.733;AC=37;AF=0.841;AN=44;BaseQRankSum=-1.711;DP=323;FS=1.933;HRun=0;HaplotypeScore=53.3892;InbreedingCoeff=0.3119;MQ=81.01;MQ0=4;MQRankSum=-0.096;QD=9.72;ReadPosRankSum=-1.492;VQSLOD=2.3723;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:17:6.46:58,6,0	1/1:1,3:4:6.02:114,6,0	./.	./.	./.	1/1:8,1:10:3.01:57,3,0	1/1:11,2:13:6.49:116,6,0	./.	1/1:10,1:17:18.05:221,18,0	1/1:9,0:9:6.01:85,6,0	1/1:3,2:5:3.01:57,3,0	1/1:7,1:10:3.01:57,3,0	0/0:12,0:12:9.03:0,9,118	0/0:7,0:7:3.01:0,3,39	1/1:10,0:10:6.02:99,6,0	1/1:12,3:15:6.49:115,6,0	1/1:12,11:23:18.06:343,18,0	1/1:7,3:11:6.02:114,6,0	./.	1/1:6,1:7:3.01:57,3,0	1/1:15,6:21:6.02:114,6,0	1/1:11,0:11:3.01:44,3,0	./.	0/0:9,0:9:6.02:0,6,78	0/1:6,4:11:2.94:261,0,3	1/1:6,3:9:9.03:159,9,0	1/1:7,1:8:3.01:57,3,0	1/1:1,0:1:3.01:57,3,0
chr10	64318207	.	C	CA	713.70	PASS	AB=0.889;AC=3;AF=0.054;AN=56;BaseQRankSum=-7.245;DP=585;FS=1.593;HRun=8;HaplotypeScore=53.8581;InbreedingCoeff=0.5989;MQ=72.36;MQ0=0;MQRankSum=-0.441;QD=20.99;ReadPosRankSum=-0.100;VQSLOD=3.4083;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,23:26:69.20:796,69,0	0/0:13,0:13:39.02:0,39,357	0/1:7,1:7:23.36:23,0,49	0/0:10,0:11:11.89:0,12,98	0/0:33,1:34:55.43:0,55,761	0/0:23,0:24:59.07:0,59,528	0/0:10,0:10:7.28:0,7,221	0/0:29,0:29:81.04:0,81,741	0/0:15,0:16:38.05:0,38,335	0/0:28,0:29:79.99:0,80,703	0/0:23,0:23:65.97:0,66,591	0/0:18,0:18:48.02:0,48,439	0/0:22,0:22:63.03:0,63,577	0/0:24,0:24:72:0,72,646	0/0:22,0:22:63.01:0,63,568	0/0:24,0:24:66.01:0,66,599	0/0:26,1:26:34.39:0,34,556	0/0:12,0:12:30.02:0,30,275	0/0:25,0:27:67.07:0,67,575	0/0:17,0:17:48.02:0,48,439	0/0:17,0:17:51.03:0,51,467	0/0:20,0:20:60.03:0,60,549	0/0:23,0:23:63.03:0,63,576	0/0:22,0:22:60.02:0,60,545	0/0:24,0:24:71.84:0,72,645	0/0:27,0:27:78.02:0,78,710	0/0:25,0:25:72.03:0,72,659	0/0:11,0:11:33.02:0,33,302
chr10	64318800	.	TAAA	T	515.50	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.156;DP=451;FS=2.166;HRun=10;HaplotypeScore=63.6882;InbreedingCoeff=0.7077;MQ=68.89;MQ0=8;MQRankSum=-1.723;QD=18.41;ReadPosRankSum=-1.270;VQSLOD=1.1285;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:36:90.29:0,90,1739	0/0:5,0:5:15.05:0,15,311	0/0:34,0:16:36.63:0,37,467	0/0:31,0:10:9.49:0,9,85	0/0:16,0:17:45.15:0,45,899	0/0:19,0:19:57.20:0,57,1167	0/0:5,0:5:9.03:0,9,186	1/1:6,22:21:45.13:610,45,0	0/0:7,0:7:18.06:0,18,350	0/0:18,0:18:39.13:0,39,809	0/0:8,0:8:21.07:0,21,434	0/0:14,0:13:36.11:0,36,697	0/0:9,0:9:21.07:0,21,435	0/0:6,0:6:15.05:0,15,273	0/0:13,0:13:33.11:0,33,669	0/0:13,0:14:39.11:0,39,733	0/0:34,0:34:93.31:0,93,1874	0/0:28,0:28:69.23:0,69,1375	0/0:26,0:25:51.18:0,51,1057	0/0:12,0:12:33.11:0,33,668	0/0:6,0:6:18.06:0,18,368	0/0:4,0:4:3:0,3,25	0/0:3,0:3:9.03:0,9,187	0/0:10,0:10:24.07:0,24,459	0/0:9,0:9:27.09:0,27,526	0/0:19,0:19:42.14:0,42,871	0/0:19,0:18:42.14:0,42,860	0/0:17,0:17:51.17:0,51,1020
chr10	64318814	.	TA	T	255.37	PASS	AC=2;AF=0.037;AN=54;BaseQRankSum=2.833;DP=466;FS=5.595;HRun=14;HaplotypeScore=57.5710;InbreedingCoeff=0.5580;MQ=72.63;MQ0=10;MQRankSum=0.646;QD=6.90;ReadPosRankSum=2.331;VQSLOD=2.4351;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:12,25:37:50.44:349,50,0	0/0:8,0:8:18:0,18,160	0/0:39,1:17:13.62:0,14,60	0/0:37,0:14:6.31:0,6,29	0/0:19,0:20:50.57:0,51,414	0/0:20,0:20:36.03:0,36,330	0/0:6,0:8:10.40:0,10,74	0/0:30,0:25:38.96:0,39,345	0/0:7,0:7:15:0,15,134	0/0:16,0:16:23.82:0,24,208	0/0:7,0:7:15.02:0,15,139	0/0:14,0:13:30.91:0,31,277	0/0:7,0:7:12.48:0,12,112	0/0:6,0:6:2.06:0,2,57	0/0:14,0:14:33:0,33,291	0/0:13,1:14:18.41:0,18,305	0/0:29,2:32:36.70:0,37,596	0/0:23,0:25:58.05:0,58,503	0/0:22,1:22:15.45:0,15,279	0/0:14,0:16:32.85:0,33,285	0/0:6,0:6:5.99:0,6,50	./.	0/0:3,0:3:2.88:0,3,15	0/0:10,0:10:21.02:0,21,195	0/0:12,0:12:27.91:0,28,249	0/0:13,0:15:29.86:0,30,262	0/0:16,0:16:23.86:0,24,209	0/0:19,1:19:18.44:0,18,308
chr10	64319026	.	GTGGAGAGGC	G	313.95	PASS	AC=4;AF=0.077;AN=52;BaseQRankSum=3.372;DP=308;FS=0.000;HRun=0;HaplotypeScore=69.4223;InbreedingCoeff=0.5698;MQ=50.98;MQ0=15;MQRankSum=-3.575;QD=16.52;ReadPosRankSum=1.608;VQSLOD=1.8953;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:3,8:11:6.02:166,6,0	0/0:5,0:5:5.79:0,6,167	0/0:24,0:5:5.61:0,6,101	0/0:25,0:10:24.07:0,24,654	0/0:6,0:6:9.03:0,9,258	0/0:10,0:10:15.05:0,15,468	0/0:18,0:17:24.08:0,24,901	0/0:8,0:7:9.03:0,9,233	1/1:5,3:8:9.03:249,9,0	0/0:9,0:8:12.03:0,12,239	0/0:4,0:4:6.02:0,6,198	0/0:15,0:15:27.09:0,27,1087	0/0:9,0:9:21.07:0,21,754	0/0:12,0:12:27.09:0,27,1167	0/0:14,0:13:18.06:0,18,619	0/0:10,0:9:15.05:0,15,504	0/0:11,0:11:18.06:0,18,569	0/0:17,0:17:39.13:0,39,1382	0/0:11,0:8:12.04:0,12,296	0/0:6,0:6:12.51:0,13,519	0/0:29,0:26:43.18:0,43,1484	./.	./.	0/0:21,0:21:45.15:0,45,1617	0/0:5,0:5:3:0,3,25	0/0:11,0:10:9.03:0,9,304	0/0:5,0:5:15.05:0,15,378	0/0:2,0:2:6.02:0,6,168
chr10	64319080	.	GTGGAGAGGC	G	154.04	PASS	AB=1.000;AC=3;AF=0.056;AN=54;BaseQRankSum=1.479;DP=339;FS=14.447;HRun=0;HaplotypeScore=81.9045;InbreedingCoeff=0.3803;MQ=57.81;MQ0=11;MQRankSum=-0.977;QD=11.85;ReadPosRankSum=0.297;VQSLOD=0.6931;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:20:27.08:0,27,754	0/1:4,0:4:13.97:14,0,207	0/0:14,0:5:8.76:0,9,386	0/0:14,0:9:21.07:0,21,769	0/0:8,0:8:9.03:0,9,355	0/0:12,0:12:27.08:0,27,951	0/0:21,0:20:46.40:0,46,1456	0/0:16,0:11:24.01:0,24,653	1/1:2,7:9:11.99:236,12,0	0/0:11,0:11:32.86:0,33,1072	0/0:6,0:5:2.02:0,2,220	0/0:12,0:12:27.08:0,27,999	0/0:10,0:10:24.04:0,24,693	0/0:10,0:10:21.06:0,21,626	0/0:7,0:7:9.03:0,9,262	0/0:8,0:8:21.07:0,21,728	0/0:16,0:16:42.13:0,42,1511	0/0:20,0:20:51.13:0,51,1973	0/0:18,0:15:33.08:0,33,961	0/0:5,0:5:6.48:0,6,80	0/0:33,0:28:43.11:0,43,1795	0/0:4,0:4:3.01:0,3,139	./.	0/0:20,0:20:50.72:0,51,1562	0/0:12,0:12:13.32:0,13,526	0/0:16,0:13:30.02:0,30,1150	0/0:5,0:5:15.04:0,15,545	0/0:6,0:6:9.03:0,9,304
chr10	64325394	.	C	CTTTT	20152.82	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-5.902;DP=650;FS=1.953;HRun=9;HaplotypeScore=102.9003;InbreedingCoeff=0.9469;MQ=63.82;MQ0=2;MQRankSum=-8.765;QD=38.10;ReadPosRankSum=-1.147;VQSLOD=3.5542;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,24:33:54.10:1160,54,0	1/1:7,10:18:33.07:676,33,0	0/0:25,0:19:2.40:0,2,474	0/0:24,0:18:42.10:0,42,591	1/1:6,18:24:45.15:1016,45,0	1/1:3,13:19:45.15:1000,45,0	1/1:8,19:28:60.16:1293,60,0	1/1:8,14:23:42.13:891,42,0	1/1:8,11:22:26.30:549,26,0	1/1:10,17:32:78.10:1373,78,0	1/1:2,14:17:39.13:891,39,0	1/1:7,15:24:35.29:679,35,0	0/0:24,0:24:69.22:0,69,1009	1/1:5,13:22:48.12:919,48,0	1/1:5,12:19:35.99:710,36,0	1/1:10,14:24:50.30:1023,50,0	1/1:6,20:32:51.09:1091,51,0	1/1:13,7:19:23.62:485,24,0	1/1:5,9:17:42.61:868,43,0	1/1:10,11:23:42.04:772,42,0	1/1:5,4:11:13.24:226,13,0	1/1:5,18:25:57.10:1185,57,0	0/0:25,0:25:72.22:0,72,1017	0/0:22,0:22:23.11:0,23,794	1/1:3,12:17:40.02:839,40,0	1/1:9,14:26:57.17:1246,57,0	1/1:8,12:22:30.57:677,31,0	1/1:7,4:16:33.08:585,33,0
chr10	64326158	.	TA	T	3980.86	PASS	AB=0.703;AC=49;AF=0.907;AN=54;BaseQRankSum=-3.889;DP=291;FS=1.641;HRun=1;HaplotypeScore=57.9510;InbreedingCoeff=0.1126;MQ=52.38;MQ0=0;MQRankSum=-4.130;QD=14.32;ReadPosRankSum=2.010;VQSLOD=3.2230;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,17:17:32.72:292,33,0	0/1:0,3:3:0:0,0,0	0/1:4,3:6:84.94:106,0,85	0/1:8,1:6:13.35:13,0,53	1/1:2,15:17:8.72:85,9,0	1/1:0,8:8:11.86:98,12,0	1/1:0,10:10:2.94:18,3,0	1/1:0,16:15:42.13:572,42,0	1/1:0,9:9:2.97:20,3,0	1/1:0,10:10:27.09:377,27,0	1/1:0,10:10:2.97:20,3,0	1/1:0,10:10:11.80:74,12,0	./.	1/1:0,11:11:2.96:19,3,0	1/1:0,13:13:11.97:144,12,0	1/1:0,13:12:11.88:98,12,0	1/1:0,11:9:11.93:121,12,0	1/1:0,3:3:8.99:104,9,0	1/1:0,10:9:27.09:377,27,0	1/1:0,14:14:5.98:62,6,0	1/1:0,6:6:5.97:62,6,0	1/1:0,10:10:11.84:78,12,0	1/1:0,13:13:11.91:121,12,0	0/0:0,5:5:0:0,0,0	1/1:0,8:8:5.92:39,6,0	1/1:0,15:15:45.15:628,45,0	1/1:0,16:16:18.02:229,18,0	1/1:0,8:8:23.87:225,24,0
chr10	64328933	.	A	AT	6925.46	PASS	AB=0.757;AC=43;AF=0.768;AN=56;BaseQRankSum=-4.609;DP=537;FS=2.024;HRun=11;HaplotypeScore=61.1819;InbreedingCoeff=0.5998;MQ=72.16;MQ0=8;MQRankSum=-1.900;QD=15.60;ReadPosRankSum=3.267;VQSLOD=5.6102;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:18,24:42:55.01:824,55,0	1/1:0,5:5:6.01:61,6,0	0/0:18,0:12:23.67:0,24,179	0/1:16,0:11:1.01:1,0,59	1/1:2,8:10:18.03:178,18,0	1/1:5,12:16:33.07:335,33,0	1/1:6,12:19:47.75:434,48,0	0/0:32,0:34:81.75:0,82,613	1/1:3,0:19:31.08:157,31,0	1/1:3,14:16:30.05:298,30,0	1/1:0,6:7:14.86:134,15,0	1/1:6,15:21:33.07:335,33,0	0/0:12,0:12:35.86:0,36,278	1/1:5,18:23:33:322,33,0	1/1:3,14:17:15.84:342,16,0	1/1:5,20:25:24.81:423,25,0	1/1:6,19:26:27.70:448,28,0	1/1:8,19:28:54.98:518,55,0	0/1:5,10:17:1.76:307,0,2	0/1:2,3:5:14.22:52,0,14	1/1:3,17:22:38.75:364,39,0	1/1:0,5:5:12.02:122,12,0	0/1:11,0:11:4.34:4,0,98	0/0:29,0:29:61.21:0,61,521	1/1:2,12:15:17.87:167,18,0	1/1:9,21:30:21.43:542,21,0	0/1:7,17:26:8.53:345,0,9	1/1:3,15:18:21.04:213,21,0
chr10	64328945	.	C	CT	745.60	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-0.467;DP=528;FS=3.394;HRun=11;HaplotypeScore=77.6414;InbreedingCoeff=0.5845;MQ=66.87;MQ0=18;MQRankSum=0.295;QD=18.64;ReadPosRankSum=1.290;VQSLOD=4.8080;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,31:40:55.32:840,55,0	0/0:5,0:5:5.27:0,5,25	0/0:23,0:12:8.76:0,9,59	0/0:23,0:7:8.74:0,9,63	0/0:11,0:10:8.72:0,9,51	0/0:13,0:12:22.27:0,22,186	0/0:21,0:21:40.18:0,40,386	0/0:34,0:34:78.11:0,78,750	0/0:21,0:21:41.92:0,42,357	0/0:17,0:16:29.56:0,30,243	0/0:9,0:9:4.40:0,4,68	0/0:17,0:17:34.83:0,35,216	0/0:14,0:14:30.04:0,30,290	0/0:21,0:21:26.17:0,26,157	0/0:18,0:18:43.31:0,43,308	0/0:23,0:23:45.97:0,46,346	0/0:26,0:26:58.16:0,58,406	0/0:24,0:24:58.34:0,58,387	0/0:20,0:20:39.96:0,40,384	0/0:6,0:5:8.92:0,9,77	0/0:18,0:18:38.99:0,39,261	0/0:6,0:6:16.47:0,16,123	0/0:9,0:9:17.98:0,18,163	0/0:26,0:26:62.95:0,63,607	0/0:14,0:14:9.13:0,9,88	0/0:25,0:25:7.10:0,7,182	0/0:27,0:25:47.14:0,47,343	0/0:17,0:17:23.33:0,23,147
chr10	64329271	.	GAGAGAGGC	G	1421.79	PASS	AB=0.870;AC=20;AF=0.526;AN=38;BaseQRankSum=-0.368;DP=372;FS=0.000;HRun=0;HaplotypeScore=66.2502;InbreedingCoeff=0.3641;MQ=44.76;MQ0=47;MQRankSum=-0.500;QD=7.25;ReadPosRankSum=-1.613;VQSLOD=1.2522;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:20:18.53:0,19,492	./.	./.	./.	./.	./.	0/1:20,0:18:70.20:136,0,70	0/0:14,0:12:0:0,0,0	0/0:11,0:10:5.05:0,5,57	1/1:18,0:14:3.01:53,3,0	./.	1/1:5,6:10:6.02:112,6,0	0/0:8,0:8:6.02:0,6,155	1/1:12,0:11:8.99:187,9,0	1/1:16,6:19:3.01:70,3,0	1/1:8,5:13:6.02:84,6,0	1/1:10,9:16:3.01:70,3,0	0/1:11,6:16:34.76:68,0,35	./.	0/0:4,0:3:0.89:0,1,2	1/1:48,0:45:26.44:657,26,0	./.	0/0:3,0:3:3.01:0,3,120	0/0:26,0:26:33.11:0,33,1028	0/0:10,0:8:1.36:0,1,3	./.	1/1:8,3:10:3.01:72,3,0	1/1:5,0:2:3.01:42,3,0
chr10	64331082	.	ACGCCTC	A	1267.29	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.444;DP=505;FS=0.000;HRun=0;HaplotypeScore=103.9529;InbreedingCoeff=0.9423;MQ=77.44;MQ0=0;MQRankSum=-3.911;QD=57.60;ReadPosRankSum=-3.863;VQSLOD=2.8817;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,105,3616	0/0:6,0:6:18.06:0,18,641	0/0:7,0:7:18.06:0,18,646	0/0:14,0:15:36.12:0,36,1186	0/0:10,0:10:24.08:0,24,874	0/0:13,0:13:39.13:0,39,1429	0/0:32,0:32:93.28:0,93,3166	1/1:1,21:22:60.19:1362,60,0	0/0:13,0:13:39.13:0,39,1409	0/0:12,0:12:36.12:0,36,1186	0/0:6,0:6:18.06:0,18,615	0/0:21,0:21:63.20:0,63,2191	0/0:14,0:14:42.14:0,42,1534	0/0:16,0:16:48.16:0,48,1720	0/0:8,0:8:24.08:0,24,879	0/0:18,0:18:54.19:0,54,1977	0/0:24,0:24:69.24:0,69,2475	0/0:21,0:21:63.22:0,63,2291	0/0:23,0:23:60.15:0,60,1922	0/0:10,0:10:30.10:0,30,1093	0/0:73,0:73:99:0,214,7468	0/0:14,0:14:42.14:0,42,1538	0/0:10,0:10:27.09:0,27,986	0/0:24,0:23:72.25:0,72,2526	0/0:18,0:18:51.12:0,51,1696	0/0:26,0:26:78.27:0,78,2847	0/0:10,0:10:30.10:0,30,1099	0/0:4,0:4:12.04:0,12,439
chr10	64331829	.	TA	T	299.76	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.185;DP=533;FS=0.837;HRun=12;HaplotypeScore=59.1823;InbreedingCoeff=0.7211;MQ=59.94;MQ0=3;MQRankSum=-0.857;QD=9.99;ReadPosRankSum=0.074;VQSLOD=2.6656;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,23:30:50.77:394,51,0	0/0:2,0:2:6.01:0,6,61	0/0:16,0:9:18.21:0,18,159	0/0:8,0:6:6.01:0,6,58	0/0:17,0:18:47.92:0,48,465	0/0:15,0:15:39.08:0,39,396	0/0:12,0:12:33.05:0,33,327	0/0:29,0:28:63.08:0,63,625	0/0:14,0:14:36.53:0,37,361	0/0:26,1:27:38.98:0,39,548	0/0:19,0:19:48.09:0,48,482	0/0:21,0:21:48.06:0,48,477	0/0:15,0:15:39.07:0,39,390	0/0:13,0:13:39.07:0,39,390	0/0:34,0:35:74.96:0,75,728	0/0:19,0:19:48.05:0,48,471	0/0:37,0:35:81.16:0,81,822	0/0:26,3:29:42.86:0,43,605	0/0:19,0:18:33.06:0,33,335	0/0:22,0:22:48.09:0,48,481	0/0:18,0:18:45.05:0,45,442	0/0:6,0:6:15.02:0,15,148	0/0:10,1:11:27.04:0,27,267	0/0:20,0:20:51.10:0,51,518	0/0:10,0:10:30.01:0,30,288	0/0:29,0:29:54.53:0,55,535	0/0:25,0:26:65.95:0,66,646	0/0:12,1:12:4.29:0,4,221
chr10	64333979	.	A	AC	372.77	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.305;DP=675;FS=0.996;HRun=0;HaplotypeScore=69.3853;InbreedingCoeff=0.9998;MQ=74.78;MQ0=0;MQRankSum=-6.031;QD=24.85;ReadPosRankSum=1.281;VQSLOD=4.4179;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,117,1593	0/0:14,0:14:39.13:0,39,545	0/0:23,0:23:66.22:0,66,913	0/0:19,0:19:54.13:0,54,714	0/0:30,0:30:81.24:0,81,1090	0/0:17,0:17:51.12:0,51,658	0/0:26,0:26:72.22:0,72,986	0/0:28,0:28:84.26:0,84,1140	1/1:1,14:15:45.09:468,45,0	0/0:29,0:29:87.29:0,87,1215	0/0:26,0:26:78.25:0,78,1066	0/0:33,0:33:96.29:0,96,1307	0/0:24,0:24:72.23:0,72,988	0/0:24,0:24:69.20:0,69,929	0/0:36,0:36:99:0,105,1468	0/0:23,0:23:69.23:0,69,964	0/0:26,0:26:78.23:0,78,1069	0/0:16,0:16:48.16:0,48,669	0/0:19,0:19:54.18:0,54,754	0/0:29,0:29:87.29:0,87,1216	0/0:27,0:27:78.24:0,78,1071	0/0:13,0:13:39.13:0,39,545	0/0:18,0:18:54.18:0,54,754	0/0:25,0:25:72.20:0,72,969	0/0:24,0:24:72.23:0,72,993	0/0:38,0:38:99:0,111,1535	0/0:18,0:18:54.18:0,54,754	0/0:16,0:16:48.16:0,48,671
chr10	64333983	.	ATGCAAAG	A	830.12	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.330;DP=669;FS=1.067;HRun=0;HaplotypeScore=151.0883;InbreedingCoeff=0.9999;MQ=74.29;MQ0=0;MQRankSum=-6.217;QD=59.29;ReadPosRankSum=2.092;VQSLOD=3.8554;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,117,4593	0/0:14,0:14:39.13:0,39,1609	0/0:23,0:23:69.24:0,69,2637	0/0:18,0:18:53.67:0,54,1888	0/0:27,0:27:78.27:0,78,3250	0/0:16,0:16:48.16:0,48,2006	0/0:21,0:21:63.22:0,63,2608	0/0:27,0:27:81.28:0,81,3270	1/1:0,14:14:42.14:925,42,0	0/0:30,0:30:90.31:0,90,3645	0/0:25,0:25:72.25:0,72,2858	0/0:33,0:33:96.32:0,96,3684	0/0:23,0:23:69.22:0,69,2697	0/0:22,0:22:66.23:0,66,2632	0/0:35,0:35:99:0,102,4208	0/0:24,0:24:69.24:0,69,2791	0/0:26,0:26:78.27:0,78,3097	0/0:17,0:17:51.18:0,51,2070	0/0:20,0:20:60.21:0,60,2302	0/0:30,0:30:90.31:0,90,3562	0/0:27,0:27:78.27:0,78,3106	0/0:16,0:16:48.16:0,48,1853	0/0:18,0:18:54.19:0,54,2177	0/0:27,0:27:81.23:0,81,3125	0/0:26,0:26:75.26:0,75,3091	0/0:37,0:37:99:0,111,4531	0/0:18,0:18:54.19:0,54,2229	0/0:16,0:16:48.16:0,48,2010
chr10	64335982	.	G	GAA	5619.64	PASS	AB=0.755;AC=45;AF=0.804;AN=56;BaseQRankSum=-2.320;DP=533;FS=1.282;HRun=12;HaplotypeScore=70.8897;InbreedingCoeff=0.5288;MQ=52.55;MQ0=22;MQRankSum=0.510;QD=12.16;ReadPosRankSum=-0.744;VQSLOD=3.2443;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:22,3:32:55.04:514,55,0	1/1:0,6:7:17.54:219,18,0	0/0:15,0:3:1.62:0,2,4	0/1:24,0:9:2.64:3,0,52	1/1:8,24:33:39.12:516,39,0	1/1:6,11:17:18.01:230,18,0	1/1:9,5:12:8.25:63,8,0	1/1:32,0:29:24.75:174,25,0	1/1:5,0:17:23.54:101,24,0	1/1:6,15:18:37.11:434,37,0	1/1:1,13:15:30.09:405,30,0	0/1:9,8:17:19.23:42,0,19	0/0:25,0:25:52.22:0,52,469	1/1:6,12:18:9.50:115,9,0	0/1:8,13:22:11.03:159,0,11	1/1:1,7:8:3.01:42,3,0	1/1:4,10:17:17.50:176,17,0	1/1:6,13:17:15.05:211,15,0	1/1:8,1:16:21.28:244,21,0	1/1:9,16:28:43.66:432,44,0	1/1:3,0:2:2.98:22,3,0	1/1:5,2:8:14.45:133,14,0	0/0:22,0:21:54.88:0,55,495	0/0:9,0:9:14.84:0,15,138	1/1:3,20:23:23.29:301,23,0	1/1:14,10:24:56.17:644,56,0	1/1:5,24:31:1.90:322,2,0	1/1:3,2:4:9.03:119,9,0
chr10	64336681	.	C	CTGTTTGTT	21969.26	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=-8.033;DP=749;FS=1.348;HRun=0;HaplotypeScore=166.8637;InbreedingCoeff=0.9582;MQ=64.22;MQ0=4;MQRankSum=-9.969;QD=41.69;ReadPosRankSum=-1.136;VQSLOD=4.6698;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:39:69.13:0,69,1223	1/1:3,5:8:15.05:600,15,0	0/0:33,0:27:21.07:0,21,449	0/0:23,0:19:6.02:0,6,103	1/1:15,12:29:33.10:966,33,0	1/1:11,10:23:30.10:1216,30,0	1/1:22,5:29:30.09:1060,30,0	1/1:29,0:32:18.02:256,18,0	0/0:39,0:39:87.30:0,87,2155	1/1:16,16:35:66.12:1983,66,0	1/1:6,7:14:27.05:916,27,0	1/1:13,11:26:36.12:1475,36,0	0/0:27,0:27:54.17:0,54,1280	1/1:16,16:33:42.14:1723,42,0	1/1:21,23:46:66.23:2663,66,0	1/1:7,0:35:74.87:612,75,0	1/1:14,6:22:21.07:767,21,0	1/1:8,4:12:17.98:437,18,0	1/1:21,4:24:21.05:562,21,0	1/1:7,6:14:18.04:555,18,0	1/1:15,5:20:9.03:302,9,0	1/1:10,7:17:21.07:859,21,0	0/0:22,0:22:39.13:0,39,951	0/0:39,0:39:81.28:0,81,1920	1/1:9,15:25:39.13:1553,39,0	1/1:18,13:34:48.14:1679,48,0	1/1:18,13:34:36.11:1280,36,0	1/1:9,1:9:18.03:507,18,0
chr10	64338021	.	AT	A	364.10	PASS	AB=0.902;AC=6;AF=0.107;AN=56;BaseQRankSum=5.228;DP=593;FS=2.883;HRun=14;HaplotypeScore=67.2714;InbreedingCoeff=0.2626;MQ=66.65;MQ0=2;MQRankSum=1.034;QD=3.25;ReadPosRankSum=2.135;VQSLOD=0.0279;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:17,32:48:42.97:432,43,0	0/1:14,4:18:34.72:35,0,136	0/0:12,0:7:5.78:0,6,47	0/1:11,0:7:4.12:4,0,33	0/0:26,2:31:21.49:0,21,440	0/0:22,2:25:9.68:0,10,346	0/0:26,1:28:45.22:0,45,523	0/0:23,0:24:41.07:0,41,386	0/0:12,0:14:29.85:0,30,257	0/0:32,0:34:59.77:0,60,517	0/0:27,0:27:51.68:0,52,443	0/0:18,0:17:47.96:0,48,419	0/0:11,0:13:27.34:0,27,238	0/0:17,1:20:16.17:0,16,270	0/0:24,0:24:50.67:0,51,413	0/0:11,1:12:6.45:0,6,202	0/0:25,0:26:56.82:0,57,505	0/1:15,2:17:2.32:2,0,253	0/0:13,0:13:23.99:0,24,209	0/0:21,0:22:38.89:0,39,339	0/1:15,2:17:3.21:3,0,230	0/0:18,1:20:50.86:0,51,438	0/0:21,0:21:44.98:0,45,395	0/0:14,1:16:24.31:0,24,352	0/0:16,0:20:29.86:0,30,262	0/0:23,1:26:36.61:0,37,434	0/0:30,1:32:48.27:0,48,563	0/0:2,0:2:2.98:0,3,22
chr10	64338222	.	A	ATG	11712.50	PASS	AB=0.679;AC=33;AF=0.611;AN=54;BaseQRankSum=-11.036;DP=830;FS=2.100;HRun=0;HaplotypeScore=110.4803;InbreedingCoeff=0.0991;MQ=61.73;MQ0=15;MQRankSum=2.565;QD=18.89;ReadPosRankSum=0.299;VQSLOD=4.9995;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:52:99:0,110,1202	1/1:3,7:10:0.25:258,0,0	0/1:40,0:13:0.90:1,0,25	./.	0/1:18,15:33:9.87:452,0,10	1/1:5,15:20:0.89:436,1,0	0/1:16,13:29:64.72:428,0,65	0/0:13,0:27:30.78:0,31,148	1/1:5,17:24:7.14:553,7,0	1/1:16,23:40:5.55:959,6,0	0/1:19,14:34:99:464,0,154	0/1:9,17:26:55.69:561,0,56	0/0:25,0:25:48.14:0,48,557	1/1:10,28:38:11.72:1098,12,0	1/1:13,21:35:36.12:562,36,0	1/1:5,18:23:16.33:714,16,0	1/1:9,2:32:57.48:543,57,0	1/1:2,8:10:24.08:375,24,0	0/1:11,8:18:7.77:313,0,8	0/1:8,20:27:18.50:651,0,19	0/1:20,29:51:21.51:1086,0,22	0/1:12,20:33:32.22:602,0,32	0/0:30,0:32:71.88:0,72,794	0/0:35,0:35:84.25:0,84,975	0/1:8,14:23:4.73:392,0,5	0/1:18,16:36:82.16:618,0,82	1/1:9,21:30:10.50:600,10,0	1/1:1,1:2:3.01:47,3,0
chr10	64338708	.	C	CTTCCT	1033.21	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-2.366;DP=714;FS=3.491;HRun=0;HaplotypeScore=132.2804;InbreedingCoeff=0.9664;MQ=84.52;MQ0=0;MQRankSum=-3.500;QD=43.05;ReadPosRankSum=-4.735;VQSLOD=2.4750;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,108,2083	0/0:5,0:5:15.05:0,15,294	0/0:25,0:25:34.65:0,35,571	0/0:25,0:23:16.80:0,17,631	0/0:22,0:22:49.38:0,49,908	0/0:17,0:17:42.13:0,42,789	0/0:31,0:31:69.20:0,69,1253	1/1:13,9:24:42.12:1128,42,0	0/0:24,0:24:63.22:0,63,1231	0/0:28,0:28:66.21:0,66,1246	0/0:11,0:11:21.07:0,21,412	0/0:37,0:37:99:0,108,2095	0/0:22,0:22:54.17:0,54,1024	0/0:24,0:24:54.19:0,54,1058	0/0:35,0:35:84.27:0,84,1571	0/0:22,0:22:54.17:0,54,1025	0/0:35,0:35:93.25:0,93,1716	0/0:21,0:21:42.13:0,42,788	0/0:26,0:26:66.22:0,66,1262	0/0:28,0:28:60.19:0,60,1117	0/0:32,0:32:69.24:0,69,1353	0/0:35,0:35:87.28:0,87,1653	0/0:20,0:20:45.15:0,45,882	0/0:35,0:35:87.27:0,87,1625	0/0:25,0:25:66.22:0,66,1261	0/0:26,0:26:69.21:0,69,1286	0/0:30,0:30:78.27:0,78,1513	0/0:8,0:8:21.07:0,21,412
chr10	64342807	.	G	GTGTT	2558	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-7.732;DP=758;FS=4.020;HRun=0;HaplotypeScore=118.4665;InbreedingCoeff=0.9914;MQ=90.10;MQ0=0;MQRankSum=-7.965;QD=65.59;ReadPosRankSum=-4.675;VQSLOD=4.4310;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,102,1903	0/0:15,0:15:45.15:0,45,823	0/0:29,0:29:75.24:0,75,1352	0/0:30,0:31:68.37:0,68,1313	0/0:29,0:29:84.19:0,84,1406	0/0:12,0:12:30.10:0,30,560	0/0:16,0:16:36.12:0,36,672	1/1:7,32:39:99:2653,105,0	0/0:16,0:16:48.14:0,48,862	0/0:27,0:27:81.28:0,81,1511	0/0:23,0:23:66.23:0,66,1224	0/0:29,0:29:84.26:0,84,1503	0/0:37,0:37:99:0,108,2015	0/0:25,0:25:72.25:0,72,1327	0/0:33,0:33:96.30:0,96,1729	0/0:21,0:21:60.21:0,60,1120	0/0:44,0:44:99:0,132,2364	0/0:25,0:25:72.25:0,72,1335	0/0:27,0:27:75.22:0,75,1329	0/0:31,0:30:93.26:0,93,1638	0/0:43,0:43:99:0,111,2030	0/0:29,0:29:87.28:0,87,1590	0/0:18,0:18:48.16:0,48,887	0/0:37,0:37:99:0,111,2061	0/0:21,0:21:60.14:0,60,1021	0/0:38,0:38:99:0,108,1984	0/0:22,0:21:66.23:0,66,1223	0/0:6,0:6:18.06:0,18,336
chr10	64344602	.	C	CT	266.46	PASS	AB=0.909;AC=3;AF=0.056;AN=54;BaseQRankSum=-4.417;DP=455;FS=0.000;HRun=10;HaplotypeScore=47.1387;InbreedingCoeff=0.5353;MQ=69.64;MQ0=1;MQRankSum=1.621;QD=9.87;ReadPosRankSum=-2.043;VQSLOD=1.5185;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:83.87:0,84,689	0/0:4,0:4:8.99:0,9,74	0/0:21,0:14:23.86:0,24,187	0/0:15,0:10:0.24:0,0,87	0/0:23,0:23:50.90:0,51,415	0/0:15,0:15:44.95:0,45,370	0/0:13,0:13:35.96:0,36,295	1/1:4,12:17:17.26:355,17,0	0/0:14,0:15:37.97:0,38,301	0/0:17,0:17:34.99:0,35,277	0/0:9,0:9:23.97:0,24,197	0/0:21,0:21:59.91:0,60,490	0/0:18,0:18:41.94:0,42,345	0/0:15,0:15:32.94:0,33,271	0/0:15,0:16:40.97:0,41,323	0/0:10,0:11:25.98:0,26,203	0/0:21,0:22:49.97:0,50,400	0/0:19,0:19:50.90:0,51,416	0/0:21,0:21:47.92:0,48,393	0/0:14,0:14:35.96:0,36,295	0/1:9,1:10:8.02:8,0,148	./.	0/0:7,0:8:20.02:0,20,154	0/0:8,0:8:23.97:0,24,197	0/0:20,0:19:53.91:0,54,441	0/0:22,1:23:24.93:0,25,411	0/0:25,0:24:59.91:0,60,492	0/0:17,0:17:41.92:0,42,345
chr10	64344842	.	TTA	T	3193.96	PASS	AC=36;AF=0.720;AN=50;BaseQRankSum=6.133;DP=216;FS=5.325;HRun=0;HaplotypeScore=32.3609;InbreedingCoeff=0.6578;MQ=69.99;MQ0=2;MQRankSum=1.876;QD=19.48;ReadPosRankSum=4.152;VQSLOD=2.4614;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:10:21.01:226,21,0	./.	0/0:3,0:2:2.37:0,2,8	0/0:11,0:6:3.68:0,4,13	1/1:2,7:9:15:165,15,0	1/1:1,10:12:12.04:146,12,0	1/1:2,2:4:3.01:36,3,0	0/0:24,0:24:51.16:0,51,777	0/0:9,0:9:15.05:0,15,242	1/1:1,3:4:9.02:98,9,0	1/1:2,2:4:6.02:73,6,0	1/1:1,1:2:3.01:36,3,0	0/0:2,0:2:3.01:0,3,48	1/1:2,3:5:6.02:73,6,0	1/1:2,5:7:4.50:169,5,0	1/1:4,4:9:12.04:145,12,0	1/1:3,14:19:44.80:501,45,0	1/1:4,16:21:36.58:438,37,0	1/1:2,11:13:33.08:386,33,0	1/1:0,4:4:9.03:109,9,0	./.	./.	0/0:1,0:1:3.01:0,3,48	0/0:2,0:2:6.02:0,6,97	1/1:3,9:12:24.07:291,24,0	1/1:2,5:7:15.04:171,15,0	1/1:7,4:11:6.02:73,6,0	1/1:2,8:10:18.05:216,18,0
chr10	64344845	.	TA	T	35.96	PASS	AB=0.611;AC=1;AF=0.020;AN=50;BaseQRankSum=4.575;DP=207;FS=0.000;HRun=1;HaplotypeScore=40.4080;InbreedingCoeff=0.1275;MQ=70.20;MQ0=2;MQRankSum=-0.357;QD=3.27;ReadPosRankSum=1.439;VQSLOD=-0.3411;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:4,7:10:3.72:109,0,4	./.	0/0:1,0:2:0.26:0,0,7	0/0:10,0:6:4.68:0,5,27	0/0:8,0:8:10.83:0,11,63	0/0:12,0:12:7.94:0,8,48	0/0:4,0:4:7.27:0,7,79	0/0:24,0:24:72.24:0,72,1083	0/0:8,0:8:24.05:0,24,328	0/0:4,0:4:8.30:0,8,57	0/0:4,0:4:8.50:0,8,68	0/0:2,0:2:4.26:0,4,41	0/0:2,0:2:6.02:0,6,86	0/0:4,0:4:5.50:0,6,43	0/0:7,0:7:12.25:0,12,97	0/0:8,0:8:12.08:0,12,121	0/0:18,0:18:20.17:0,20,106	0/0:21,0:21:26.90:0,27,161	0/0:13,0:13:21.38:0,21,118	0/0:4,0:4:3.74:0,4,8	./.	./.	0/0:1,0:1:3.01:0,3,48	0/0:2,0:2:6.02:0,6,96	0/0:11,0:11:15.99:0,16,97	0/0:6,0:6:10.79:0,11,62	0/0:11,0:11:20.52:0,21,206	0/0:10,0:10:14.07:0,14,93
chr10	64346696	.	TTGG	T	252.78	PASS	AB=0.953;AC=13;AF=0.232;AN=56;BaseQRankSum=3.443;DP=471;FS=34.587;HRun=0;HaplotypeScore=52.6809;InbreedingCoeff=-0.3514;MQ=32.78;MQ0=133;MQRankSum=0.306;QD=0.99;ReadPosRankSum=-2.295;VQSLOD=-0.2494;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:34,1:25:27.17:27,0,441	0/0:6,0:2:3:0,3,27	0/0:15,0:1:3:0,3,28	0/0:29,0:3:3.01:0,3,35	0/1:15,1:12:75.76:76,0,109	0/0:16,0:9:17.69:0,18,211	0/1:17,0:8:4.93:5,0,52	0/0:9,0:5:11.94:0,12,136	0/1:17,0:14:58.14:58,0,222	0/1:16,1:14:32.30:32,0,244	0/0:13,0:10:22.60:0,23,236	0/1:18,0:14:7.41:7,0,114	0/0:12,0:9:11.57:0,12,167	0/1:14,0:11:41.62:42,0,173	0/1:11,5:13:7.45:7,0,195	0/0:8,0:7:3.01:0,3,33	0/1:25,7:18:42.38:42,0,241	0/1:27,0:17:17.54:18,0,180	0/1:13,0:6:24.21:24,0,101	0/0:12,0:10:10.71:0,11,232	0/0:14,0:7:8.29:0,8,107	0/1:11,0:7:28.65:29,0,62	0/0:6,0:6:15.05:0,15,191	0/0:29,0:20:6.58:0,7,332	0/0:7,0:7:18.06:0,18,231	0/0:12,0:9:26.86:0,27,311	0/1:22,0:17:28.28:28,0,296	0/0:24,0:13:5.19:0,5,249
chr10	64347890	.	TATAAGCTA	T	25721.91	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=16.146;DP=672;FS=9.327;HRun=0;HaplotypeScore=192.3505;InbreedingCoeff=0.9953;MQ=82.35;MQ0=0;MQRankSum=-17.297;QD=55.68;ReadPosRankSum=2.345;VQSLOD=4.1035;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:75.26:0,75,3150	1/1:3,10:13:21.07:560,21,0	0/0:26,0:26:57.20:0,57,2067	0/0:26,0:26:59.96:0,60,2028	1/1:7,27:34:66.11:1655,66,0	1/1:5,24:29:60.21:1618,60,0	1/1:4,23:27:63.22:1699,63,0	0/0:30,0:30:78.26:0,78,3116	0/0:23,0:23:63.22:0,63,2696	1/1:7,27:34:81.21:1812,81,0	1/1:4,17:21:45.15:1203,45,0	1/1:5,25:30:60.21:1611,60,0	0/0:30,0:30:84.28:0,84,3541	1/1:6,12:18:27.09:728,27,0	1/1:3,25:28:63.22:1698,63,0	1/1:2,16:18:45.15:1213,45,0	1/1:5,6:11:15.05:405,15,0	1/1:6,11:17:33.11:890,33,0	1/1:11,11:22:30.05:639,30,0	1/1:4,16:20:39.13:1044,39,0	1/1:3,14:17:24.08:647,24,0	1/1:1,23:24:66.23:1762,66,0	0/0:27,0:27:75.24:0,75,3040	0/0:20,0:20:57.20:0,57,2451	1/1:2,27:29:75.26:2023,75,0	1/1:4,22:26:66.20:1684,66,0	1/1:4,29:33:84.29:2265,84,0	1/1:1,10:11:21.07:566,21,0
chr10	64349492	.	C	CCTG	641.93	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-5.670;DP=552;FS=4.417;HRun=0;HaplotypeScore=75.4969;InbreedingCoeff=0.8477;MQ=58.83;MQ0=15;MQRankSum=0.188;QD=45.85;ReadPosRankSum=0.871;VQSLOD=5.0934;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:96.33:0,96,1559	0/0:6,0:6:18.06:0,18,294	0/0:11,0:4:6.02:0,6,98	0/0:24,0:9:9.09:0,9,98	0/0:22,0:22:60.20:0,60,979	0/0:15,0:15:39.09:0,39,606	0/0:24,0:23:54.18:0,54,873	0/0:25,0:15:42.14:0,42,681	1/1:1,13:14:33.11:736,33,0	0/0:22,0:22:60.16:0,60,925	0/0:20,0:20:57.19:0,57,927	0/0:26,0:26:66.23:0,66,1074	0/0:16,0:16:48.16:0,48,784	0/0:13,0:13:39.13:0,39,637	0/0:27,0:27:75.26:0,75,1225	0/0:23,0:23:66.23:0,66,1078	0/0:22,0:22:48.14:0,48,746	0/0:18,0:18:45.09:0,45,681	0/0:27,0:24:57.19:0,57,919	0/0:19,0:19:51.17:0,51,832	0/0:17,0:17:42.11:0,42,626	0/0:8,0:8:18.05:0,18,271	0/0:15,0:15:42.13:0,42,662	0/0:21,0:21:51.17:0,51,829	0/0:23,0:23:69.24:0,69,1124	0/0:22,0:22:63.19:0,63,982	0/0:22,0:22:60.20:0,60,980	0/0:18,0:18:51.17:0,51,832
chr10	64349551	.	AAAAAAAG	A	1631.30	PASS	AB=0.949;AC=22;AF=0.407;AN=54;BaseQRankSum=7.794;DP=485;FS=37.235;HRun=0;HaplotypeScore=85.9336;InbreedingCoeff=0.1764;MQ=46.24;MQ0=34;MQRankSum=-6.259;QD=5.93;ReadPosRankSum=4.276;VQSLOD=-0.2870;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:31:84.36:0,84,1629	0/1:10,0:9:3.46:124,0,3	./.	0/0:14,0:5:6.02:0,6,73	0/0:9,5:11:4.74:0,5,25	0/1:27,0:23:29.62:202,0,30	0/1:16,2:17:29.28:134,0,29	0/0:29,0:25:64.11:0,64,1101	0/0:5,0:4:10.19:0,10,78	1/1:23,0:22:22.05:262,22,0	0/1:5,12:16:11.05:116,0,11	0/0:10,0:9:8.98:0,9,85	0/0:19,0:18:50.46:0,50,890	0/1:13,0:12:8:62,0,8	0/0:13,0:12:3.48:0,3,23	0/1:10,0:10:5.67:71,0,6	0/1:31,0:24:39.20:39,0,47	0/0:21,0:19:2.62:0,3,11	0/1:19,0:14:2.57:190,0,3	1/1:18,0:16:14.36:114,14,0	1/1:11,0:10:8.80:59,9,0	1/1:8,0:7:8.98:74,9,0	0/0:12,0:12:34.65:0,35,647	0/0:21,0:21:45.11:0,45,833	0/1:15,0:12:41.52:78,0,42	1/1:23,0:23:15.99:185,16,0	1/1:20,0:20:0.71:32,1,0	0/1:12,0:11:40.69:61,0,41
chr10	64349552	.	AAAAAAG	A	2092.01	PASS	AB=0.808;AC=33;AF=0.611;AN=54;BaseQRankSum=6.660;DP=446;FS=31.741;HRun=0;HaplotypeScore=72.0944;InbreedingCoeff=0.6277;MQ=45.61;MQ0=34;MQRankSum=-4.190;QD=7.69;ReadPosRankSum=3.611;VQSLOD=-0.5251;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:31:77.07:0,77,1302	1/1:9,1:9:14.53:170,15,0	./.	0/0:15,0:5:5.99:0,6,52	0/0:14,0:11:1.77:0,2,4	1/1:23,1:21:7.70:225,8,0	1/1:13,1:13:19.95:166,20,0	0/0:30,0:26:64.15:0,64,917	0/0:5,0:4:9.81:0,10,68	1/1:18,3:20:27.93:346,28,0	1/1:15,0:14:5.59:97,6,0	0/0:10,0:9:5.91:0,6,39	0/0:19,0:18:46.88:0,47,685	1/1:12,0:11:11.17:78,11,0	1/1:12,0:11:0.63:16,1,0	1/1:10,0:10:11.27:85,11,0	1/1:30,2:25:7.97:108,8,0	0/1:11,8:17:1.94:14,0,2	1/1:16,0:11:22.84:226,23,0	1/1:14,0:12:20.11:151,20,0	1/1:8,0:7:11.81:80,12,0	1/1:7,0:6:11.83:79,12,0	0/0:12,0:12:34.33:0,34,522	0/0:21,0:21:45.09:0,45,675	0/1:10,3:10:7.99:76,0,8	1/1:17,0:17:27.11:222,27,0	1/1:3,14:17:2.97:56,3,0	0/1:9,1:9:7.80:85,0,8
chr10	64349553	.	AAAAAG	A	2008.72	PASS	AC=36;AF=0.667;AN=54;BaseQRankSum=5.970;DP=401;FS=25.165;HRun=0;HaplotypeScore=61.1051;InbreedingCoeff=0.7626;MQ=45.61;MQ0=33;MQRankSum=-5.268;QD=8.81;ReadPosRankSum=3.784;VQSLOD=0.2804;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:30:72.35:0,72,1010	1/1:9,0:8:14.80:150,15,0	./.	0/0:17,0:5:5.94:0,6,43	0/0:13,0:10:1.36:0,1,3	1/1:23,0:19:22.31:215,22,0	1/1:13,0:13:20.53:160,21,0	0/0:32,0:28:67.06:0,67,782	0/0:5,0:4:9.39:0,9,67	1/1:16,0:15:29.56:307,30,0	1/1:15,0:14:5.84:84,6,0	0/0:9,0:8:0:0,0,0	0/0:19,0:18:44.35:0,44,535	1/1:11,0:10:11.67:78,12,0	1/1:8,0:7:2.91:20,3,0	1/1:9,0:9:11.44:86,11,0	1/1:23,0:16:9.81:97,10,0	1/1:10,0:8:2.98:21,3,0	1/1:15,0:10:23.68:209,24,0	1/1:12,0:10:22.94:156,23,0	1/1:7,0:6:11.87:80,12,0	1/1:6,0:5:11.87:79,12,0	0/0:12,0:12:33.81:0,34,405	0/0:21,0:21:44.97:0,45,532	1/1:12,0:9:8.69:81,9,0	1/1:0,16:17:29.45:243,29,0	1/1:14,0:14:3.01:42,3,0	1/1:8,0:7:8.71:83,9,0
chr10	64349714	.	AAGAG	A	301.84	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.926;DP=530;FS=3.202;HRun=0;HaplotypeScore=90.4378;InbreedingCoeff=0.8402;MQ=67.83;MQ0=1;MQRankSum=-0.962;QD=23.22;ReadPosRankSum=-0.043;VQSLOD=3.4482;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,120,2989	0/0:2,0:2:6.02:0,6,153	0/0:16,0:10:22.61:0,23,422	0/0:20,0:15:27.62:0,28,511	0/0:28,0:28:72.25:0,72,1747	0/0:30,0:30:87.30:0,87,2092	0/0:19,0:19:48.16:0,48,1090	0/0:29,0:28:63.20:0,63,1471	1/1:0,13:13:24.08:395,24,0	0/0:24,0:24:63.22:0,63,1583	0/0:22,0:22:60.21:0,60,1518	0/0:18,0:18:48.16:0,48,1170	0/0:12,0:12:30.10:0,30,758	0/0:18,0:18:51.18:0,51,1267	0/0:20,0:20:54.17:0,54,1294	0/0:11,0:11:27.09:0,27,655	0/0:33,0:33:66.23:0,66,1682	0/0:19,0:19:45.15:0,45,1044	0/0:20,0:20:54.19:0,54,1268	0/0:30,0:30:81.28:0,81,1998	0/0:9,0:9:24.08:0,24,582	0/0:7,0:7:15.05:0,15,382	0/0:11,0:11:33.11:0,33,814	0/0:3,0:3:9.03:0,9,229	0/0:18,0:18:54.19:0,54,1354	0/0:20,0:20:51.18:0,51,1268	0/0:21,0:21:57.20:0,57,1420	0/0:12,0:12:36.12:0,36,785
chr10	64350913	.	GA	G	7796.50	PASS	AB=0.793;AC=46;AF=0.821;AN=56;BaseQRankSum=5.125;DP=558;FS=9.087;HRun=12;HaplotypeScore=59.1114;InbreedingCoeff=0.7408;MQ=59.21;MQ0=11;MQRankSum=0.693;QD=16.18;ReadPosRankSum=-0.705;VQSLOD=5.3031;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,32:37:83.67:650,84,0	1/1:1,9:10:20.90:163,21,0	0/0:9,0:4:9.02:0,9,91	0/1:12,0:4:5.22:5,0,25	0/1:7,17:21:9.96:297,0,10	1/1:3,10:13:3.76:166,4,0	1/1:0,10:10:23.91:186,24,0	1/1:6,23:28:68.73:533,69,0	1/1:3,16:20:37.78:284,38,0	1/1:1,25:26:74.71:580,75,0	1/1:5,13:18:32.45:317,32,0	1/1:5,12:18:40.85:307,41,0	0/0:10,0:10:19.84:0,20,182	1/1:6,19:25:49.83:377,50,0	1/1:0,10:10:29.89:232,30,0	1/1:4,17:22:34.38:295,34,0	1/1:9,28:39:51.30:559,51,0	1/1:6,17:23:41.79:325,42,0	1/1:2,11:13:32.84:253,33,0	1/1:6,17:23:46.53:354,47,0	1/1:3,15:18:41.83:325,42,0	1/1:1,14:15:32.52:255,33,0	0/0:22,1:23:25.33:0,25,434	0/0:32,2:33:31.16:0,31,702	1/1:5,12:17:37.88:283,38,0	1/1:3,22:25:10.86:449,11,0	1/1:0,24:24:56.78:441,57,0	1/1:0,7:7:20.92:162,21,0
chr10	64351632	.	T	TAA	2105.44	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=0.931;DP=541;FS=4.884;HRun=3;HaplotypeScore=72.5488;InbreedingCoeff=0.9932;MQ=64.76;MQ0=0;MQRankSum=-3.010;QD=46.79;ReadPosRankSum=-4.480;VQSLOD=1.8688;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:85.72:0,86,1213	0/0:9,0:9:24.08:0,24,336	0/0:23,0:22:50.47:0,50,614	0/0:19,0:19:45.14:0,45,612	0/0:16,0:16:48.16:0,48,668	0/0:15,0:15:45.13:0,45,611	0/0:18,0:18:45.14:0,45,612	1/1:7,37:45:99:2200,126,0	0/0:12,0:12:36.07:0,36,450	0/0:16,0:16:39.13:0,39,545	0/0:15,0:15:36.12:0,36,504	0/0:15,0:15:36.12:0,36,504	0/0:21,0:21:60.19:0,60,821	0/0:20,0:20:60.19:0,60,822	0/0:28,0:28:78.23:0,78,1057	0/0:15,0:15:45.14:0,45,613	0/0:26,0:26:75.23:0,75,1029	0/0:17,0:17:51.17:0,51,714	0/0:14,0:14:36.11:0,36,488	0/0:20,0:20:57.16:0,57,762	0/0:15,0:15:42.14:0,42,588	0/0:15,0:15:42.14:0,42,587	0/0:8,0:8:21.06:0,21,277	0/0:19,0:19:57.11:0,57,738	0/0:16,0:16:39.10:0,39,527	0/0:21,0:21:63.20:0,63,866	0/0:29,0:29:87.19:0,87,1141	0/0:18,0:18:54.18:0,54,756
chr10	64351676	.	CAT	C	301.88	PASS	AB=0.886;AC=13;AF=0.232;AN=56;BaseQRankSum=6.743;DP=537;FS=0.613;HRun=0;HaplotypeScore=73.7259;InbreedingCoeff=-0.2624;MQ=64.68;MQ0=0;MQRankSum=0.335;QD=1.19;ReadPosRankSum=1.642;VQSLOD=0.7499;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:36,2:39:51.79:52,0,873	0/0:10,0:10:24.08:0,24,387	0/0:6,0:6:1.82:0,2,5	0/1:11,0:9:1.31:1,0,4	0/0:14,1:16:2.48:0,2,511	0/0:20,1:21:17.51:0,18,787	0/1:7,0:7:2.70:3,0,271	0/0:35,0:35:55.84:0,56,649	0/1:8,4:12:85.94:86,0,219	0/0:19,1:21:17.49:0,17,717	0/0:19,1:20:11.07:0,11,613	0/0:13,2:15:5.46:0,5,522	0/1:20,4:24:22.16:22,0,651	0/0:21,0:21:45.13:0,45,682	0/1:22,4:26:16.18:16,0,737	0/0:10,0:10:21.04:0,21,291	0/1:19,2:21:31.21:31,0,456	0/1:18,3:21:22.14:22,0,667	0/0:18,2:20:14.17:0,14,620	0/0:24,0:24:66.20:0,66,1025	0/1:13,3:16:67.90:68,0,418	0/1:12,1:13:23.70:24,0,152	0/1:14,3:17:34.20:34,0,460	0/0:19,0:19:42.14:0,42,681	0/0:22,1:24:26.51:0,27,818	0/0:20,1:21:13.61:0,14,688	0/1:22,4:27:21.23:21,0,834	0/1:17,3:20:64.99:65,0,405
chr10	64355631	.	AG	A	23516.69	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=6.975;DP=867;FS=9.776;HRun=2;HaplotypeScore=85.6938;InbreedingCoeff=0.9998;MQ=91.06;MQ0=0;MQRankSum=-5.348;QD=38.05;ReadPosRankSum=7.410;VQSLOD=4.0321;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,144,2188	1/1:0,15:15:42.14:587,42,0	0/0:35,0:35:99:0,102,1541	0/0:33,0:33:90.23:0,90,1375	1/1:0,28:28:84.28:1174,84,0	1/1:0,22:22:57.19:797,57,0	1/1:0,27:27:72.24:1007,72,0	0/0:40,0:40:99:0,120,1890	1/1:0,31:31:87.29:1215,87,0	1/1:0,39:39:99:1578,114,0	1/1:0,23:23:69.19:943,69,0	1/1:0,42:42:99:1636,117,0	0/0:40,0:40:99:0,120,1838	1/1:0,30:30:81.27:1133,81,0	1/1:0,48:48:99:1636,117,0	1/1:0,42:42:99:1552,111,0	1/1:0,26:26:66.22:923,66,0	1/1:0,23:23:66.22:920,66,0	1/1:0,24:24:72.23:973,72,0	1/1:0,26:26:78.22:1069,78,0	1/1:0,50:50:99:1887,135,0	1/1:0,26:26:75.12:982,75,0	0/0:26,0:26:78.25:0,78,1223	0/0:27,0:27:81.26:0,81,1268	1/1:0,22:22:57.19:797,57,0	1/1:0,31:31:93.29:1282,93,0	1/1:0,31:31:75.25:1049,75,0	1/1:0,12:12:27.09:376,27,0
chr10	64358547	.	GT	G	1665.78	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.436;DP=715;FS=0.586;HRun=1;HaplotypeScore=67.6252;InbreedingCoeff=0.9969;MQ=83.79;MQ0=0;MQRankSum=-4.751;QD=37.86;ReadPosRankSum=2.880;VQSLOD=4.3017;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,44:44:99:1761,126,0	0/0:9,0:9:27.09:0,27,432	0/0:17,0:17:47.88:0,48,705	0/0:25,0:25:65.98:0,66,967	0/0:13,0:13:39.13:0,39,622	0/0:22,0:22:66.23:0,66,1055	0/0:24,0:24:72.25:0,72,1151	0/0:33,0:33:99:0,99,1542	0/0:21,0:21:63.21:0,63,1004	0/0:36,0:36:99:0,105,1638	0/0:19,0:19:57.19:0,57,911	0/0:37,0:37:99:0,111,1698	0/0:35,0:35:99:0,105,1675	0/0:29,0:29:87.30:0,87,1390	0/0:18,0:18:54.18:0,54,863	0/0:20,0:20:57.19:0,57,911	0/0:37,0:37:99:0,111,1750	0/0:18,0:18:54.16:0,54,838	0/0:34,0:34:99:0,99,1561	0/0:20,0:20:57.17:0,57,864	0/0:52,0:52:99:0,156,2426	0/0:23,0:23:69.24:0,69,1102	0/0:25,0:25:75.23:0,75,1152	0/0:31,0:31:93.32:0,93,1483	0/0:26,0:26:78.20:0,78,1173	0/0:24,0:24:72.25:0,72,1151	0/0:15,0:15:45.15:0,45,719	0/0:8,0:8:24.08:0,24,383
chr10	64360045	.	GA	G	8745.75	PASS	AB=0.714;AC=42;AF=0.750;AN=56;BaseQRankSum=2.903;DP=738;FS=1.739;HRun=11;HaplotypeScore=87.7388;InbreedingCoeff=0.4646;MQ=62.95;MQ0=10;MQRankSum=2.150;QD=13.93;ReadPosRankSum=3.008;VQSLOD=5.3421;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:37:89.31:0,89,862	1/1:0,8:8:17.94:147,18,0	0/1:15,2:10:30.59:31,0,142	0/1:19,0:14:8.53:9,0,88	1/1:7,31:39:17.23:522,17,0	1/1:2,19:20:35.93:296,36,0	1/1:7,17:23:38.93:320,39,0	1/1:13,41:53:77.33:865,77,0	1/1:3,16:18:29.96:246,30,0	1/1:4,25:29:71.90:590,72,0	1/1:8,17:23:18.79:350,19,0	1/1:9,18:27:4.15:235,4,0	0/0:25,0:25:47.99:0,48,461	1/1:6,21:27:50.91:417,51,0	1/1:6,22:27:56.90:467,57,0	1/1:4,14:19:40.99:326,41,0	1/1:6,23:29:24.04:408,24,0	1/1:5,19:24:17.43:252,17,0	1/1:9,15:24:44.21:387,44,0	0/1:7,24:30:21:450,0,21	0/1:6,11:17:3.51:148,0,4	1/1:1,16:17:38.88:313,39,0	0/0:23,1:24:26.50:0,26,486	0/0:24,0:24:63.13:0,63,656	1/1:10,25:33:50.30:402,50,0	1/1:0,35:35:95.72:786,96,0	0/1:8,26:33:3.81:383,0,4	0/1:12,13:24:13.30:397,0,13
chr10	64364621	.	ATGTAAAAGTAC	A	1494.68	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.689;DP=907;FS=16.960;HRun=0;HaplotypeScore=275.7503;InbreedingCoeff=1.0000;MQ=84.43;MQ0=0;MQRankSum=-6.769;QD=51.54;ReadPosRankSum=-0.644;VQSLOD=1.8894;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,27:29:48.12:1590,48,0	0/0:15,0:15:45.14:0,45,2305	0/0:35,0:35:99:0,105,5150	0/0:22,0:22:54.18:0,54,2479	0/0:38,0:38:99:0,114,6250	0/0:42,0:42:99:0,117,6678	0/0:29,0:29:84.29:0,84,4244	0/0:35,0:35:99:0,102,5426	0/0:28,0:28:81.28:0,81,4354	0/0:36,0:36:93.32:0,93,5239	0/0:30,0:30:87.26:0,87,4430	0/0:45,0:45:99:0,132,7357	0/0:37,0:37:99:0,108,5718	0/0:30,0:30:90.31:0,90,5122	0/0:43,0:43:99:0,126,7075	0/0:45,0:45:99:0,135,7519	0/0:22,0:22:63.22:0,63,3426	0/0:25,0:25:75.26:0,75,3939	0/0:20,0:20:60.21:0,60,3382	0/0:37,0:37:99:0,111,5772	0/0:41,0:41:99:0,123,6740	0/0:37,0:37:99:0,105,5492	0/0:29,0:29:81.26:0,81,4232	0/0:36,0:36:99:0,108,6010	0/0:21,0:21:60.21:0,60,3301	0/0:38,0:38:99:0,108,5967	0/0:38,0:35:99:0,111,6087	0/0:24,0:24:69.24:0,69,3949
chr10	64365354	.	G	GTA	1452.61	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-8.939;DP=542;FS=0.639;HRun=0;HaplotypeScore=62.8220;InbreedingCoeff=0.7017;MQ=64.26;MQ0=0;MQRankSum=3.964;QD=32.28;ReadPosRankSum=-5.999;VQSLOD=3.0438;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:54.17:0,54,687	0/0:16,0:16:42.13:0,42,534	0/0:9,0:5:1.52:0,2,44	0/0:8,0:5:2.33:0,2,8	0/0:30,0:30:83.26:0,83,1005	0/0:24,0:24:63.14:0,63,745	0/0:12,0:12:33.08:0,33,391	1/1:10,35:45:45.81:1547,46,0	0/0:18,0:18:42.10:0,42,506	0/0:25,0:25:60.17:0,60,734	0/0:29,0:28:81.22:0,81,990	0/0:20,0:20:48.15:0,48,608	0/0:18,0:18:51.11:0,51,603	0/0:20,0:20:54.16:0,54,673	0/0:19,0:19:54.13:0,54,645	0/0:13,0:13:39.11:0,39,483	0/0:11,0:11:30.10:0,30,380	0/0:22,0:22:57.17:0,57,709	0/0:19,0:19:36.08:0,36,412	0/0:24,0:24:60.18:0,60,748	0/0:4,0:4:12.04:0,12,152	0/0:7,0:7:18.06:0,18,229	0/0:13,0:13:36.09:0,36,442	0/0:7,0:7:15.03:0,15,176	0/0:23,0:23:63.20:0,63,800	0/0:27,0:27:63.18:0,63,766	0/0:38,0:38:99:0,111,1351	0/0:12,0:12:33.09:0,33,404
chr10	64366508	.	CT	C	503.90	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=1.978;DP=651;FS=0.000;HRun=8;HaplotypeScore=100.6214;InbreedingCoeff=0.9662;MQ=77.45;MQ0=0;MQRankSum=-0.666;QD=21.00;ReadPosRankSum=1.069;VQSLOD=3.1502;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,22:24:63.05:599,63,0	0/0:12,0:12:36.11:0,36,435	0/0:13,0:13:27.38:0,27,301	0/0:19,1:20:11.60:0,12,397	0/0:20,0:20:54.15:0,54,641	0/0:30,0:30:81.20:0,81,938	0/0:15,0:15:39.12:0,39,471	0/0:35,0:35:99:0,99,1186	0/0:24,0:25:75.05:0,75,874	0/0:20,0:20:51.16:0,51,616	0/0:18,0:18:48.15:0,48,580	0/0:21,0:21:60.18:0,60,724	0/0:31,0:31:81.18:0,81,939	0/0:24,0:24:69.21:0,69,834	0/0:32,0:33:96.17:0,96,1120	0/0:26,0:26:66.18:0,66,775	0/0:22,0:22:57.15:0,57,665	0/0:21,0:21:57.10:0,57,646	0/0:23,0:23:66.19:0,66,785	0/0:13,0:13:36.11:0,36,435	0/0:23,0:23:48.15:0,48,580	0/0:21,0:21:60.17:0,60,708	0/0:22,0:22:54:0,54,652	0/0:21,0:20:57.16:0,57,674	0/0:21,0:21:57.14:0,57,648	0/0:22,0:22:57.16:0,57,669	0/0:41,0:41:99:0,111,1330	0/0:34,0:34:81.23:0,81,966
chr10	64371384	.	T	TACACACACACACACACAC	15692.18	PASS	AB=1.000;AC=41;AF=0.788;AN=52;BaseQRankSum=-1.404;DP=560;FS=2.456;HRun=0;HaplotypeScore=241.9904;InbreedingCoeff=0.6771;MQ=58.35;MQ0=13;MQRankSum=-6.764;QD=38.09;ReadPosRankSum=-2.258;VQSLOD=3.4434;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:33:13.60:385,14,0	1/1:4,0:3:3.01:195,3,0	0/1:36,0:15:0.58:1,0,103	0/0:35,0:20:2.84:0,3,132	1/1:16,0:14:3.01:94,3,0	1/1:15,5:19:15.94:1041,16,0	1/1:20,0:19:15.03:417,15,0	1/1:22,0:20:21.06:682,21,0	1/1:12,0:22:30.57:742,31,0	1/1:22,0:22:44.36:2232,44,0	./.	1/1:31,0:27:9.48:400,9,0	0/0:15,0:15:24.07:0,24,855	1/1:10,0:10:9.01:190,9,0	1/1:9,1:10:3.01:253,3,0	1/1:20,2:22:12.04:813,12,0	1/1:12,3:13:12.04:600,12,0	1/1:17,0:16:21.07:1317,21,0	1/1:12,0:9:14.64:204,15,0	1/1:26,0:23:15.04:625,15,0	0/0:15,0:11:0.14:0,0,1	./.	0/0:10,0:20:27.09:0,27,694	0/0:21,0:23:48.14:0,48,1781	1/1:13,1:19:9.03:643,9,0	1/1:24,0:21:45.15:2707,45,0	1/1:15,1:18:21.07:1519,21,0	1/1:10,0:10:9.03:631,9,0
chr10	64372483	.	TA	T	889.73	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.446;DP=738;FS=1.635;HRun=2;HaplotypeScore=68.8944;InbreedingCoeff=0.9990;MQ=90.88;MQ0=0;MQRankSum=-1.511;QD=30.68;ReadPosRankSum=-3.534;VQSLOD=2.3236;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,105,1573	0/0:9,0:9:27.09:0,27,402	0/0:34,0:34:95.62:0,96,1275	0/0:24,0:24:68.15:0,68,889	0/0:28,0:28:84.27:0,84,1237	0/0:25,0:25:75.23:0,75,1085	0/0:22,0:22:60.20:0,60,890	1/1:3,26:29:78.23:985,78,0	0/0:15,0:15:45.15:0,45,673	0/0:34,0:34:99:0,102,1529	0/0:19,0:19:57.15:0,57,829	0/0:31,0:31:93.30:0,93,1373	0/0:29,0:29:87.25:0,87,1243	0/0:28,0:28:78.25:0,78,1137	0/0:28,0:28:84.26:0,84,1202	0/0:29,0:29:87.29:0,87,1284	0/0:31,0:31:93.29:0,93,1371	0/0:28,0:28:84.26:0,84,1230	0/0:25,0:25:72.21:0,72,1038	0/0:25,0:25:75.25:0,75,1122	0/0:26,0:26:78.25:0,78,1149	0/0:23,0:23:69.22:0,69,1014	0/0:29,0:29:84.28:0,84,1258	0/0:25,0:25:75.23:0,75,1086	0/0:20,0:20:60.20:0,60,899	0/0:36,0:36:99:0,102,1512	0/0:33,0:32:99:0,99,1456	0/0:18,0:18:54.10:0,54,723
chr10	64375723	.	GA	G	9463.67	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=10.025;DP=536;FS=16.567;HRun=8;HaplotypeScore=80.8011;InbreedingCoeff=0.9801;MQ=60.65;MQ0=7;MQRankSum=0.471;QD=21.08;ReadPosRankSum=2.207;VQSLOD=3.7118;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,24:28:63.10:607,63,0	1/1:0,9:9:24.04:232,24,0	0/0:10,0:9:27.07:0,27,308	0/0:10,0:5:8.54:0,9,44	1/1:3,25:28:72:674,72,0	1/1:4,19:23:51.07:492,51,0	1/1:8,12:17:21.03:203,21,0	1/1:4,13:16:39.03:367,39,0	0/0:14,0:14:33.10:0,33,399	1/1:4,18:22:54.05:512,54,0	1/1:0,18:18:54.09:521,54,0	1/1:5,16:20:42.06:405,42,0	0/0:11,0:11:27.07:0,27,314	1/1:3,13:16:30.04:290,30,0	1/1:3,18:20:48.07:463,48,0	1/1:4,21:25:48.08:464,48,0	1/1:2,23:24:66.11:637,66,0	1/1:2,18:20:45.07:432,45,0	1/1:4,6:9:14.99:134,15,0	1/1:6,23:29:60.04:570,60,0	1/1:5,12:17:36.05:346,36,0	1/1:2,15:17:36.04:348,36,0	0/0:19,0:19:45.14:0,45,543	0/0:23,0:23:60.17:0,60,714	1/1:3,8:11:18.02:174,18,0	1/1:4,20:24:60.09:579,60,0	1/1:3,29:32:66.10:636,66,0	1/1:1,15:16:39.06:377,39,0
chr10	64376002	.	G	GCC	240.11	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-2.196;DP=532;FS=1.033;HRun=9;HaplotypeScore=100.9791;InbreedingCoeff=0.9616;MQ=67.51;MQ0=5;MQRankSum=1.208;QD=11.43;ReadPosRankSum=-2.427;VQSLOD=1.0274;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:76.94:0,77,796	0/0:4,0:4:12.03:0,12,128	0/0:29,0:14:23.03:0,23,244	0/0:29,1:18:16.33:0,16,195	0/0:25,0:25:66.04:0,66,699	0/0:23,0:23:53.80:0,54,533	0/0:20,0:20:45.98:0,46,481	1/1:11,0:10:15.02:148,15,0	1/1:1,4:9:18.04:208,18,0	0/0:16,0:16:41.86:0,42,424	0/0:12,0:12:33.08:0,33,351	0/0:10,0:10:26.88:0,27,257	0/0:11,0:12:26.91:0,27,270	0/0:9,0:9:27.07:0,27,287	0/0:18,0:18:44.26:0,44,427	0/0:29,0:29:77.74:0,78,796	0/0:31,0:31:80.82:0,81,825	0/0:22,0:22:48.54:0,49,510	0/0:19,0:20:48.18:0,48,429	0/0:14,0:14:31.58:0,32,289	0/0:22,0:22:59.77:0,60,588	0/0:9,0:9:26.95:0,27,263	0/0:12,0:12:26.98:0,27,272	0/0:21,0:24:47.53:0,48,526	0/0:13,0:13:33.97:0,34,353	0/0:26,0:26:65.15:0,65,659	0/0:32,0:32:87.13:0,87,919	0/0:14,0:14:42.11:0,42,446
chr10	64377610	.	T	TA	1450.45	PASS	AB=0.975;AC=32;AF=0.571;AN=56;BaseQRankSum=10.193;DP=464;FS=0.000;HRun=5;HaplotypeScore=99.7339;InbreedingCoeff=0.4779;MQ=74.06;MQ0=1;MQRankSum=-3.093;QD=4.53;ReadPosRankSum=2.908;VQSLOD=-0.4286;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:20.50:0,21,183	0/1:13,0:13:2.40:70,0,2	0/0:25,0:18:31.87:0,32,290	0/0:14,0:9:8.18:0,8,52	1/1:22,0:21:15.62:142,16,0	1/1:23,0:22:22.04:96,22,0	1/1:15,0:15:22.42:105,22,0	0/0:31,0:29:59.91:0,60,616	0/0:14,0:14:27.03:0,27,276	0/1:10,0:10:9.42:9,0,19	1/1:22,2:24:11.50:188,12,0	1/1:16,0:15:9.12:30,9,0	0/0:15,0:14:23.30:0,23,256	0/1:13,0:13:7.95:63,0,8	1/1:18,0:18:18.79:94,19,0	1/1:13,0:13:15.52:62,16,0	1/1:22,0:22:29.08:132,29,0	1/1:11,1:12:22.32:141,22,0	0/1:16,0:16:2.25:73,0,2	0/1:6,2:8:4.14:102,0,4	1/1:10,0:10:7.25:29,7,0	1/1:6,0:6:7.72:46,8,0	0/0:17,0:17:39.10:0,39,417	0/0:9,0:9:23.94:0,24,234	0/1:15,0:14:14.22:14,0,19	0/1:16,0:16:7.80:48,0,8	0/1:29,0:29:6.44:119,0,6	1/1:19,0:18:20.48:84,20,0
chr10	64377617	.	T	TTAA	10483.92	PASS	AB=0.756;AC=43;AF=0.768;AN=56;BaseQRankSum=2.716;DP=499;FS=1.568;HRun=0;HaplotypeScore=81.9016;InbreedingCoeff=0.7001;MQ=68.70;MQ0=1;MQRankSum=-2.705;QD=25.14;ReadPosRankSum=0.164;VQSLOD=4.8839;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:4,2:22:41.42:73,0,41	1/1:0,9:12:17.81:314,18,0	0/0:24,0:17:37.50:0,37,358	0/1:12,0:7:7.10:7,0,19	1/1:4,16:25:62.81:822,63,0	1/1:1,17:21:36.03:680,36,0	1/1:1,11:15:29.60:583,30,0	0/1:20,0:31:81.07:81,0,335	0/0:8,0:15:32.86:0,33,375	1/1:4,5:12:27.08:374,27,0	1/1:4,15:25:60.57:887,61,0	1/1:0,16:19:18.52:328,19,0	0/0:11,0:14:39.42:0,39,520	1/1:10,3:13:38.87:473,39,0	1/1:1,13:21:33.57:555,34,0	1/1:1,2:15:21.06:338,21,0	1/1:0,15:20:36.11:668,36,0	1/1:0,3:12:24.08:458,24,0	1/1:5,10:16:30.93:565,31,0	1/1:1,6:11:29.93:420,30,0	1/1:0,9:12:9.03:178,9,0	1/1:0,7:7:14.92:199,15,0	0/0:16,0:17:41.82:0,42,537	0/0:8,0:11:30.02:0,30,390	1/1:1,11:14:15.05:290,15,0	1/1:4,9:20:56.81:727,57,0	1/1:5,20:32:57.09:998,57,0	1/1:1,5:21:27.02:463,27,0
chr10	64377760	.	C	CCT	4896.79	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=4.819;DP=483;FS=8.491;HRun=0;HaplotypeScore=85.3786;InbreedingCoeff=0.9651;MQ=68.54;MQ0=3;MQRankSum=-2.181;QD=12.24;ReadPosRankSum=1.105;VQSLOD=3.9609;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,0:40:72.25:422,72,0	1/1:2,0:7:8.71:48,9,0	0/0:7,0:5:12.04:0,12,146	0/0:15,0:16:28.84:0,29,333	1/1:1,0:21:52.12:281,52,0	1/1:2,0:33:69.69:382,70,0	1/1:1,0:14:17.42:95,17,0	1/1:6,15:21:42.07:615,42,0	0/0:12,0:12:24.03:0,24,279	1/1:3,0:19:33.79:236,34,0	1/1:0,0:14:23.22:126,23,0	1/1:0,0:22:49.29:272,49,0	0/0:16,0:15:36.11:0,36,458	1/1:1,0:14:26.10:142,26,0	1/1:1,0:16:25.50:164,25,0	1/1:0,0:16:37.84:222,38,0	1/1:1,0:23:49.31:268,49,0	1/1:6,0:14:32.43:216,32,0	1/1:1,0:13:28.16:156,28,0	1/1:1,0:11:23.27:130,23,0	1/1:3,1:24:40.46:279,40,0	1/1:1,0:5:9.73:46,10,0	0/0:11,0:11:27.08:0,27,335	0/0:21,0:21:60.18:0,60,775	1/1:1,0:13:17.92:117,18,0	1/1:3,0:21:48.07:280,48,0	1/1:1,0:19:37.77:208,38,0	1/1:1,0:14:34.83:189,35,0
chr10	64377917	.	T	TA	1505.85	PASS	AB=0.759;AC=25;AF=0.446;AN=56;BaseQRankSum=-6.378;DP=560;FS=2.904;HRun=17;HaplotypeScore=69.8150;InbreedingCoeff=-0.4710;MQ=72.71;MQ0=3;MQRankSum=-2.527;QD=3.45;ReadPosRankSum=0.544;VQSLOD=0.0446;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:32:34.08:0,34,170	0/1:3,4:7:6.57:37,0,7	0/1:32,0:14:7.68:8,0,18	0/0:29,0:18:9.57:0,10,49	0/1:26,4:31:23.71:24,0,107	0/1:21,3:29:51.87:139,0,52	0/1:8,9:17:13.15:73,0,13	0/0:14,0:35:35.39:0,35,100	1/1:5,5:11:4.38:119,4,0	0/1:19,7:26:44.11:44,0,57	0/1:11,7:19:27.17:97,0,27	0/1:11,5:16:39.08:39,0,54	0/1:6,1:9:10.10:10,0,29	0/1:6,3:9:28.54:50,0,29	0/1:18,3:26:27.88:110,0,28	0/1:3,8:12:25.82:62,0,26	0/1:5,13:20:13.83:91,0,14	0/1:11,10:21:25.68:71,0,26	0/1:18,2:20:43.59:89,0,44	0/1:6,6:12:13.15:73,0,13	0/1:5,8:14:13.78:91,0,14	0/1:9,0:9:14.72:15,0,22	0/0:17,0:18:16.78:0,17,92	0/0:9,0:9:16.34:0,16,83	1/1:12,10:22:10.88:108,11,0	0/1:9,6:16:26.24:82,0,26	0/1:17,26:45:2.07:211,0,2	0/1:8,4:13:14.19:24,0,14
chr10	64377942	.	GTCACTGAAAT	G	331.20	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.365;DP=494;FS=0.000;HRun=0;HaplotypeScore=148.3257;InbreedingCoeff=0.9622;MQ=82.02;MQ0=1;MQRankSum=-3.708;QD=41.40;ReadPosRankSum=0.414;VQSLOD=3.3541;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:84.29:0,84,4369	0/0:6,0:6:15.05:0,15,780	0/0:20,0:14:39.13:0,39,1959	0/0:25,0:20:46.43:0,46,2038	0/0:22,0:22:60.21:0,60,3141	0/0:27,0:27:72.25:0,72,3692	0/0:11,0:11:24.08:0,24,1261	0/0:33,0:33:84.29:0,84,4209	1/1:4,4:8:15.01:420,15,0	0/0:25,0:25:72.25:0,72,3620	0/0:14,0:14:36.11:0,36,1751	0/0:18,0:18:39.12:0,39,1851	0/0:9,0:9:27.09:0,27,1338	0/0:16,0:16:39.12:0,39,1832	0/0:22,0:22:57.67:0,58,2881	0/0:17,0:17:42.14:0,42,2172	0/0:24,0:24:54.19:0,54,2801	0/0:17,0:17:39.13:0,39,1933	0/0:12,0:12:36.12:0,36,1534	0/0:16,0:16:45.15:0,45,2281	0/0:16,0:16:36.12:0,36,1920	0/0:13,0:13:36.11:0,36,1770	0/0:13,0:13:33.11:0,33,1618	0/0:12,0:12:33.11:0,33,1583	0/0:10,0:10:27.09:0,27,1278	0/0:14,0:14:42.14:0,42,2184	0/0:33,0:33:78.26:0,78,3964	0/0:11,0:11:27.09:0,27,1189
chr10	64378758	.	GA	G	1780.86	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.885;DP=615;FS=13.995;HRun=4;HaplotypeScore=60.7342;InbreedingCoeff=0.9162;MQ=86.29;MQ0=0;MQRankSum=-2.763;QD=28.27;ReadPosRankSum=-2.105;VQSLOD=1.6025;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,29:31:81.25:970,81,0	0/0:2,0:2:3.01:0,3,42	0/0:28,0:28:76.77:0,77,965	0/0:19,0:18:44.88:0,45,579	0/0:29,0:29:87.28:0,87,1193	0/0:19,0:19:51.13:0,51,686	0/0:21,0:21:63.12:0,63,818	1/1:5,27:32:81.18:932,81,0	0/0:23,0:23:69.23:0,69,955	0/0:23,0:23:66.22:0,66,907	0/0:19,0:19:54.17:0,54,734	0/0:34,0:34:93.27:0,93,1269	0/0:19,0:19:57.17:0,57,774	0/0:11,0:11:30.09:0,30,402	0/0:29,0:29:81.27:0,81,1125	0/0:27,0:27:78.22:0,78,1033	0/0:25,0:25:72.20:0,72,951	0/0:24,0:24:72.21:0,72,965	0/0:24,0:24:63.20:0,63,859	0/0:20,0:20:60.19:0,60,819	0/0:19,0:19:57.18:0,57,775	0/0:21,0:21:63.16:0,63,838	0/0:17,0:17:51.16:0,51,692	0/0:18,0:18:54.03:0,54,676	0/0:19,0:19:54.18:0,54,750	0/0:31,0:31:84.27:0,84,1152	0/0:21,0:21:60.20:0,60,832	0/0:10,0:10:30.10:0,30,417
chr10	64380558	.	T	TA	617.60	PASS	AB=0.759;AC=2;AF=0.036;AN=56;BaseQRankSum=6.843;DP=587;FS=2.037;HRun=0;HaplotypeScore=73.9155;InbreedingCoeff=0.0899;MQ=68.50;MQ0=11;MQRankSum=1.571;QD=7.53;ReadPosRankSum=-0.080;VQSLOD=3.0524;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:18,32:51:6.95:493,0,7	0/0:8,0:8:23.99:0,24,291	0/0:62,0:19:37.04:0,37,412	0/0:49,0:20:3.51:0,4,261	0/0:22,0:22:60.18:0,60,802	0/0:16,0:16:45.07:0,45,556	0/0:9,0:9:27.08:0,27,359	0/1:28,1:30:97.40:213,0,97	0/0:14,0:14:36.09:0,36,457	0/0:21,0:20:60.09:0,60,761	0/0:17,0:17:48.13:0,48,632	0/0:8,0:8:24.08:0,24,325	0/0:10,0:10:27.09:0,27,364	0/0:14,0:14:38.92:0,39,503	0/0:12,0:12:36.10:0,36,478	0/0:13,0:13:39.12:0,39,524	0/0:43,0:43:99:0,117,1558	0/0:21,0:21:59.20:0,59,770	0/0:23,0:23:66.22:0,66,900	0/0:20,0:20:60.15:0,60,755	0/0:5,0:5:12.04:0,12,167	0/0:8,0:8:21.06:0,21,276	0/0:12,0:12:36.11:0,36,478	0/0:15,0:15:45.08:0,45,563	0/0:21,0:21:59.76:0,60,768	0/0:22,0:22:65.68:0,66,852	0/0:20,0:20:57.19:0,57,772	0/0:20,0:20:56.37:0,56,735
chr10	64380559	.	T	TAA	806.74	PASS	AB=0.981;AC=3;AF=0.054;AN=56;BaseQRankSum=7.242;DP=591;FS=4.205;HRun=13;HaplotypeScore=85.4152;InbreedingCoeff=0.6088;MQ=68.39;MQ0=11;MQRankSum=0.653;QD=9.60;ReadPosRankSum=-0.456;VQSLOD=2.1656;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:50,1:51:12.30:416,0,12	0/0:8,0:8:24:0,24,210	0/0:63,0:19:39.95:0,40,301	0/0:49,0:20:23.93:0,24,180	0/0:22,0:22:49.30:0,49,407	0/0:15,0:16:32.95:0,33,290	0/0:9,0:9:23.94:0,24,211	1/1:17,15:32:12.58:491,13,0	0/0:11,0:14:29.66:0,30,248	0/0:19,0:20:37.24:0,37,407	0/0:14,0:16:35.85:0,36,361	0/0:8,0:8:17.96:0,18,158	0/0:10,0:10:20.95:0,21,179	0/0:13,0:13:22.18:0,22,230	0/0:10,0:12:20.59:0,21,215	0/0:12,0:13:26.84:0,27,282	0/0:42,0:44:91.91:0,92,828	0/0:21,0:22:50.64:0,51,441	0/0:23,0:23:59.69:0,60,513	0/0:16,0:21:50.01:0,50,391	0/0:5,0:5:8.91:0,9,74	0/0:8,0:8:23.98:0,24,207	0/0:12,0:12:29.66:0,30,249	0/0:14,0:15:26.56:0,27,267	0/0:20,0:21:47.62:0,48,395	0/0:22,0:22:48.89:0,49,468	0/0:20,0:20:44.90:0,45,392	0/0:18,0:20:31.98:0,32,291
chr10	64381864	.	TGAAG	T	1070.38	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.127;DP=820;FS=0.000;HRun=0;HaplotypeScore=130.0320;InbreedingCoeff=0.9443;MQ=63.78;MQ0=3;MQRankSum=2.535;QD=17.84;ReadPosRankSum=1.881;VQSLOD=3.4142;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:39:13.55:0,14,144	0/0:10,0:10:21.06:0,21,456	0/0:25,0:19:17.65:0,18,130	0/0:21,0:16:15.05:0,15,229	0/0:32,0:32:54.07:0,54,1112	0/0:34,0:34:66.20:0,66,1422	0/0:26,0:26:51.13:0,51,996	0/0:27,0:26:32.75:0,33,263	1/1:7,17:24:33.11:517,33,0	0/0:30,0:30:57.19:0,57,1334	0/0:23,0:23:60.19:0,60,1344	1/1:13,22:34:42.14:674,42,0	0/0:34,0:34:78.24:0,78,1749	0/0:38,0:38:81.21:0,81,1665	0/0:36,0:36:66.20:0,66,1486	0/0:53,1:54:63.18:0,63,2367	0/0:28,0:28:58.73:0,59,1184	0/0:25,0:25:51.10:0,51,1080	0/0:20,0:19:21.07:0,21,505	0/0:32,0:32:60.14:0,60,1200	0/0:23,0:23:54.08:0,54,1088	0/0:36,0:36:81.23:0,81,1721	0/0:28,0:28:72.24:0,72,1622	0/0:36,0:36:87.60:0,88,1843	0/0:28,0:28:58.06:0,58,1247	0/0:31,0:31:63.21:0,63,1434	0/0:34,0:33:75.20:0,75,1602	0/0:10,0:10:9.03:0,9,144
chr10	64384143	.	G	GA	624.70	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-5.640;DP=732;FS=19.575;HRun=2;HaplotypeScore=70.7189;InbreedingCoeff=0.9993;MQ=78.12;MQ0=0;MQRankSum=-1.153;QD=34.71;ReadPosRankSum=0.617;VQSLOD=1.8243;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,129,1674	0/0:11,0:11:30.10:0,30,390	0/0:27,0:27:78.20:0,78,960	0/0:26,0:25:34.64:0,35,708	0/0:26,0:26:75.24:0,75,973	0/0:23,0:23:69.19:0,69,867	0/0:21,0:21:63.18:0,63,802	0/0:36,0:36:99:0,102,1324	1/1:0,18:18:48.16:720,48,0	0/0:34,0:34:99:0,99,1278	0/0:15,0:15:42.14:0,42,545	0/0:29,0:29:84.27:0,84,1091	0/0:27,0:27:81.26:0,81,1052	0/0:35,0:35:99:0,102,1310	0/0:33,0:33:99:0,99,1271	0/0:26,0:26:78.24:0,78,998	0/0:30,0:30:81.26:0,81,1052	0/0:19,0:19:57.12:0,57,705	0/0:21,0:21:60.19:0,60,779	0/0:31,0:31:87.75:0,88,1129	0/0:27,0:27:81.26:0,81,1052	0/0:20,0:20:60.18:0,60,764	0/0:25,0:25:69.22:0,69,894	0/0:23,0:23:66.21:0,66,857	0/0:18,0:18:54.18:0,54,701	0/0:34,0:34:99:0,99,1272	0/0:35,0:35:99:0,105,1363	0/0:15,0:15:45.15:0,45,584
chr10	64387301	.	TAC	T	723.99	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.205;DP=702;FS=1.606;HRun=0;HaplotypeScore=80.4835;InbreedingCoeff=0.8826;MQ=70.86;MQ0=0;MQRankSum=0.691;QD=22.62;ReadPosRankSum=-3.730;VQSLOD=3.2932;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:89.33:0,89,1381	0/0:7,0:7:18.06:0,18,278	0/0:26,0:24:48.12:0,48,717	0/0:28,0:24:34.63:0,35,510	0/0:26,0:26:63.18:0,63,976	0/0:26,0:26:66.21:0,66,1047	0/0:23,0:23:48.16:0,48,770	1/1:9,23:32:69.16:819,69,0	0/0:35,0:35:87.23:0,87,1314	0/0:31,0:31:84.28:0,84,1350	0/0:18,0:18:45.11:0,45,680	0/0:27,0:27:66.22:0,66,1058	0/0:20,0:20:51.04:0,51,782	0/0:21,0:21:51.17:0,51,827	0/0:33,0:32:53.38:0,53,1378	0/0:31,0:31:78.24:0,78,1245	0/0:22,1:23:23.28:0,23,862	0/0:15,1:16:5.23:0,5,586	0/0:26,0:26:27.21:0,27,844	0/0:35,0:35:85.53:0,86,1366	0/0:22,0:22:51.17:0,51,819	0/0:16,0:16:39.12:0,39,608	0/0:26,0:26:57.19:0,57,900	0/0:22,0:22:60.20:0,60,964	0/0:24,0:24:66.23:0,66,1065	0/0:26,0:26:72.25:0,72,1174	0/0:35,0:35:96.29:0,96,1509	0/0:13,0:13:30.97:0,31,465
chr10	64389567	.	GA	G	3772.06	PASS	AB=0.532;AC=44;AF=0.846;AN=52;BaseQRankSum=-3.263;DP=388;FS=5.066;HRun=2;HaplotypeScore=593.1857;InbreedingCoeff=-0.1730;MQ=31.45;MQ0=0;MQRankSum=-0.648;QD=9.75;ReadPosRankSum=6.313;VQSLOD=0.4302;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,28:28:46.57:373,47,0	0/1:4,7:11:5:79,0,5	./.	./.	0/1:0,13:13:33.89:52,0,34	1/1:0,16:16:24.72:227,25,0	1/1:1,24:24:36.70:330,37,0	1/1:1,14:15:21.55:217,22,0	0/1:3,20:23:1.41:210,0,1	1/1:1,10:11:14.71:144,15,0	0/1:1,13:14:13.05:48,0,13	0/1:2,16:18:3.01:81,0,3	1/1:0,17:17:18.12:130,18,0	1/1:0,18:18:19.67:178,20,0	1/1:1,21:22:29:228,29,0	1/1:0,14:14:8.91:162,9,0	1/1:0,16:16:23:187,23,0	1/1:0,8:8:12.97:94,13,0	0/1:1,5:6:21.49:30,0,21	0/1:1,14:15:38.41:96,0,38	1/1:1,7:7:5.92:47,6,0	1/1:0,10:10:10.82:58,11,0	0/1:0,5:5:17.36:30,0,17	1/1:0,7:7:14.97:122,15,0	1/1:0,16:16:21.92:177,22,0	1/1:0,22:21:29.78:275,30,0	1/1:3,22:24:10.33:141,10,0	1/1:0,4:4:8.83:57,9,0
chr10	64389602	.	CA	C	1899.20	PASS	AB=0.529;AC=37;AF=0.740;AN=50;BaseQRankSum=-1.066;DP=340;FS=7.624;HRun=2;HaplotypeScore=641.7816;InbreedingCoeff=-0.2662;MQ=28.71;MQ0=0;MQRankSum=-0.880;QD=5.67;ReadPosRankSum=-2.399;VQSLOD=0.3829;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:1,20:21:4.68:127,0,5	1/1:0,5:5:6.25:50,6,0	./.	./.	0/1:0,12:12:22.61:60,0,23	1/1:0,14:14:13.55:132,14,0	1/1:2,15:17:13.14:139,13,0	0/1:2,20:22:14.61:109,0,15	0/1:2,15:17:1.32:110,0,1	1/1:0,10:10:8.28:86,8,0	1/1:1,11:12:0.39:40,0,0	0/1:0,13:13:28.72:38,0,29	1/1:0,14:14:11.23:73,11,0	0/1:2,15:17:18.52:81,0,19	1/1:1,22:23:11.24:201,11,0	1/1:1,10:11:12.02:104,12,0	0/1:2,12:14:14.33:14,0,29	1/1:0,8:7:8.93:49,9,0	0/1:1,9:10:18.43:48,0,18	0/1:3,10:13:8.25:61,0,8	0/1:1,2:3:0:0,0,0	1/1:1,12:13:16.95:100,17,0	0/1:0,6:6:4.35:36,0,4	./.	1/1:1,16:17:18.85:153,19,0	0/1:3,17:19:25.90:87,0,26	0/1:1,17:18:1.79:56,0,2	1/1:0,5:5:11.79:77,12,0
chr10	64389625	.	CCA	C	3027.88	PASS	AB=0.504;AC=43;AF=0.827;AN=52;BaseQRankSum=-2.859;DP=277;FS=14.929;HRun=0;HaplotypeScore=528.0322;InbreedingCoeff=-0.0654;MQ=28.72;MQ0=0;MQRankSum=1.013;QD=10.93;ReadPosRankSum=-0.598;VQSLOD=3.1474;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:1,14:15:6.42:194,0,6	1/1:0,6:6:8.24:85,8,0	./.	./.	1/1:0,7:7:10.35:133,10,0	1/1:0,15:15:8.23:297,8,0	1/1:1,9:10:10.48:115,10,0	0/1:0,19:19:12.17:113,0,12	0/1:0,13:13:15.42:124,0,15	1/1:0,5:5:7.54:29,8,0	1/1:1,11:12:6.65:34,7,0	1/1:1,10:11:0.28:51,0,0	0/1:1,12:13:11.64:45,0,12	1/1:0,16:16:21.26:257,21,0	1/1:0,18:18:30.82:352,31,0	1/1:1,9:10:16.10:154,16,0	1/1:0,9:9:16.62:105,17,0	0/1:0,7:6:5.04:39,0,5	0/1:0,10:10:0.76:47,0,1	1/1:0,9:9:14.16:104,14,0	0/1:0,3:3:0:0,0,0	1/1:2,11:13:16.85:167,17,0	0/1:0,7:7:3.50:137,0,4	0/1:0,3:3:0.07:1,0,0	1/1:1,13:14:3.61:169,4,0	1/1:0,15:15:21.76:234,22,0	1/1:0,13:13:5.27:30,5,0	1/1:0,4:4:9.50:126,10,0
chr10	64389663	.	AC	A	2709.40	PASS	AB=0.600;AC=51;AF=0.944;AN=54;BaseQRankSum=-3.236;DP=275;FS=70.897;HRun=2;HaplotypeScore=350.2573;InbreedingCoeff=0.1709;MQ=39.44;MQ0=11;MQRankSum=-1.533;QD=10.15;ReadPosRankSum=4.547;VQSLOD=0.3634;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,17:19:35.54:287,36,0	1/1:1,4:5:8.93:66,9,0	0/0:7,0:3:0.68:0,1,12	./.	1/1:0,7:7:17.92:141,18,0	1/1:1,13:14:16.79:198,17,0	1/1:1,6:7:17.96:145,18,0	1/1:5,12:16:34.02:237,34,0	1/1:2,9:11:15.67:124,16,0	1/1:2,3:5:6.62:48,7,0	1/1:0,10:10:11.53:78,12,0	0/1:3,6:9:5.54:39,0,6	1/1:3,8:11:14.13:102,14,0	1/1:0,12:12:18.07:144,18,0	1/1:2,11:13:20.56:179,21,0	1/1:1,8:9:15.84:139,16,0	1/1:7,4:11:7.86:45,8,0	1/1:1,5:5:7.87:39,8,0	1/1:2,3:5:5.99:54,6,0	1/1:1,7:8:11.35:80,11,0	1/1:2,2:3:2.99:24,3,0	1/1:2,11:13:17.77:134,18,0	1/1:1,6:7:11.84:93,12,0	1/1:2,4:6:2.93:24,3,0	1/1:3,11:14:14.14:119,14,0	1/1:2,11:13:19.50:136,20,0	1/1:0,7:7:5.97:46,6,0	1/1:14,9:13:11.85:83,12,0
chr10	64389860	.	A	AC	944.25	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-7.018;DP=581;FS=1.497;HRun=6;HaplotypeScore=60.2522;InbreedingCoeff=0.9657;MQ=88.60;MQ0=0;MQRankSum=0.016;QD=26.98;ReadPosRankSum=-4.068;VQSLOD=2.2621;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,105,1064	0/0:5,0:5:12.03:0,12,122	0/0:21,0:21:26.53:0,27,331	0/0:26,0:26:41.06:0,41,423	0/0:23,0:23:51.11:0,51,519	0/0:29,0:29:72.14:0,72,726	0/0:25,0:25:72.15:0,72,727	1/1:6,29:35:84.25:1039,84,0	0/0:16,0:16:45.10:0,45,459	0/0:24,0:24:66.15:0,66,673	0/0:15,0:15:33.07:0,33,337	0/0:10,0:10:30.07:0,30,305	0/0:24,0:24:60.13:0,60,609	0/0:24,0:24:66.14:0,66,672	0/0:20,0:20:51.11:0,51,519	0/0:20,0:20:51.11:0,51,520	0/0:31,0:31:84.19:0,84,856	0/0:17,0:17:48.10:0,48,489	0/0:14,0:14:36.08:0,36,367	0/0:19,0:19:57.12:0,57,575	0/0:23,0:23:66.15:0,66,673	0/0:15,0:15:36.07:0,36,360	0/0:22,0:22:60.13:0,60,610	0/0:13,0:13:33.07:0,33,336	0/0:13,0:13:33.07:0,33,336	0/0:22,0:22:63.13:0,63,636	0/0:26,0:26:69.13:0,69,696	0/0:8,0:8:24.05:0,24,245
chr10	64392701	.	GC	G	9921.83	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=3.831;DP=617;FS=18.451;HRun=9;HaplotypeScore=65.0833;InbreedingCoeff=0.9993;MQ=85.15;MQ0=0;MQRankSum=-1.650;QD=22.30;ReadPosRankSum=1.324;VQSLOD=3.7089;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:24:45.79:0,46,271	1/1:0,8:8:24.01:220,24,0	0/0:28,0:28:38.33:0,38,389	0/0:12,0:12:26.83:0,27,244	0/0:24,0:24:63.19:0,63,724	1/1:5,18:23:51.02:467,51,0	1/1:1,25:26:66.03:604,66,0	1/1:10,24:34:42.26:524,42,0	0/0:20,0:20:54.16:0,54,623	1/1:6,17:24:53.06:473,53,0	1/1:2,29:31:81.04:741,81,0	1/1:1,19:20:54.03:494,54,0	0/0:23,0:23:57.17:0,57,658	1/1:0,21:21:60.01:542,60,0	1/1:3,22:25:60.03:549,60,0	1/1:6,26:32:43.39:652,43,0	1/1:2,19:21:57.02:522,57,0	1/1:2,13:15:30.01:275,30,0	1/1:1,15:16:45.02:412,45,0	1/1:1,19:20:57.03:521,57,0	1/1:4,23:28:70.74:621,71,0	1/1:3,17:20:45.02:412,45,0	0/0:22,0:22:57.15:0,57,647	0/0:19,0:19:45.12:0,45,509	1/1:3,25:28:69.03:631,69,0	1/1:2,12:14:36.02:330,36,0	1/1:1,22:23:60.03:549,60,0	1/1:1,15:16:42.02:384,42,0
chr10	64394104	.	GCCTT	G	105.12	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.443;DP=478;FS=5.199;HRun=0;HaplotypeScore=73.2962;InbreedingCoeff=0.7544;MQ=61.48;MQ0=0;MQRankSum=2.681;QD=7.01;ReadPosRankSum=-2.706;VQSLOD=1.1629;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:72.22:0,72,1597	0/0:9,0:9:21.07:0,21,462	0/0:7,0:4:2.12:0,2,122	0/0:11,0:5:12.04:0,12,223	1/1:3,12:15:20.80:197,21,0	0/0:13,0:13:36.12:0,36,783	0/0:21,0:21:42.14:0,42,898	0/0:32,0:32:48.08:0,48,765	0/0:15,0:15:42.12:0,42,841	0/0:14,0:14:33.10:0,33,656	0/0:12,0:12:30.08:0,30,589	0/0:24,0:24:57.17:0,57,1248	0/0:8,0:8:18.05:0,18,369	0/0:23,0:23:54.18:0,54,1184	0/0:17,0:17:42.14:0,42,951	0/0:27,0:27:57.18:0,57,1306	0/0:18,0:18:30.10:0,30,697	0/0:17,0:17:30.05:0,30,634	0/0:23,0:23:39.12:0,39,871	0/0:12,0:12:36.08:0,36,608	0/0:32,0:32:72.23:0,72,1579	0/0:17,0:17:42.54:0,43,795	0/0:8,0:8:18.06:0,18,382	0/0:17,0:17:36.11:0,36,805	0/0:12,0:12:30.09:0,30,592	0/0:26,0:26:57.16:0,57,1140	0/0:12,0:12:24.07:0,24,503	0/0:7,0:7:9.01:0,9,141
chr10	64394368	.	TC	T	538.53	PASS	AB=0.909;AC=7;AF=0.125;AN=56;BaseQRankSum=5.482;DP=270;FS=10.845;HRun=9;HaplotypeScore=31.3716;InbreedingCoeff=0.5448;MQ=68.49;MQ0=3;MQRankSum=0.331;QD=8.69;ReadPosRankSum=3.914;VQSLOD=0.1569;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,22:27:31.41:542,31,0	0/0:5,0:5:15.03:0,15,164	0/1:10,1:8:5.48:5,0,114	0/0:9,0:6:12.03:0,12,133	0/0:10,0:10:27.08:0,27,312	0/0:5,0:5:15.04:0,15,165	0/0:14,0:14:36.09:0,36,406	0/0:16,0:17:38.94:0,39,421	1/1:0,5:5:12.01:110,12,0	0/0:7,0:6:18.05:0,18,207	0/0:11,0:11:27.06:0,27,300	0/1:8,1:9:0.40:0,0,240	0/1:9,1:10:0.43:0,0,220	0/0:6,0:6:15.03:0,15,163	0/0:9,0:9:27.07:0,27,303	0/0:10,0:10:27.07:0,27,305	0/0:12,0:12:27.08:0,27,312	0/0:5,0:5:9.03:0,9,104	0/0:13,0:13:24.07:0,24,277	0/0:6,0:6:18.05:0,18,208	0/0:11,0:11:27.07:0,27,302	0/0:16,0:15:36.08:0,36,395	0/0:5,0:5:12.04:0,12,138	0/0:9,0:9:18.05:0,18,208	0/0:9,0:9:27.08:0,27,310	0/0:8,0:8:24.07:0,24,277	0/0:9,0:9:24.06:0,24,267	0/0:1,0:1:3.01:0,3,35
chr10	64395694	.	TCTCACACA	T	2520.90	PASS	AB=0.967;AC=21;AF=0.375;AN=56;BaseQRankSum=5.649;DP=608;FS=8.637;HRun=0;HaplotypeScore=165.5583;InbreedingCoeff=-0.3612;MQ=49.89;MQ0=33;MQRankSum=0.654;QD=5.44;ReadPosRankSum=-3.307;VQSLOD=1.3470;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:37,0:35:99:126,0,388	0/1:6,0:6:49.92:58,0,50	0/0:1,0:1:2.94:0,3,18	0/0:8,0:6:5.06:0,5,61	0/0:24,0:19:10.43:0,10,176	0/1:27,0:26:99:354,0,115	0/1:38,0:33:99:139,0,154	0/1:27,0:26:16.93:164,0,17	1/1:22,0:20:38.39:317,38,0	0/1:19,0:18:99:143,0,119	0/0:15,0:15:7.39:0,7,50	0/1:18,0:18:66.25:115,0,66	0/0:17,0:16:17.52:0,18,694	0/1:28,0:28:0.99:1,0,254	0/1:24,0:24:99:110,0,217	0/1:25,0:23:99:129,0,182	0/1:34,0:31:92.43:92,0,440	0/1:19,0:17:80.58:81,0,89	0/1:12,4:15:99:147,0,110	0/0:13,0:12:9.89:0,10,98	0/1:56,0:52:99:421,0,299	0/0:6,5:9:8.97:0,9,74	0/0:11,0:11:11.08:0,11,327	0/0:45,0:42:18.58:0,19,1702	0/1:8,11:18:42.36:42,0,73	0/1:19,0:17:61.98:62,0,172	0/1:26,0:25:99:159,0,231	1/1:3,0:3:2.96:20,3,0
chr10	64395696	.	TCACACA	T	2205.07	PASS	AB=0.898;AC=33;AF=0.635;AN=52;BaseQRankSum=2.446;DP=602;FS=14.016;HRun=0;HaplotypeScore=151.1113;InbreedingCoeff=0.4036;MQ=49.76;MQ0=37;MQRankSum=-0.771;QD=5.02;ReadPosRankSum=-1.845;VQSLOD=1.7840;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:33:25.92:0,26,432	1/1:4,0:6:3.01:49,3,0	./.	./.	0/0:16,0:18:2.81:0,3,42	1/1:27,0:26:18.06:350,18,0	1/1:30,0:33:5.95:120,6,0	0/0:27,0:26:11.75:0,12,72	1/1:17,0:18:5.85:85,6,0	0/1:14,5:18:11.03:141,0,11	0/0:9,7:16:0.94:0,1,2	1/1:11,6:18:6.02:97,6,0	0/0:19,0:17:27.06:0,27,503	1/1:20,7:27:2.88:61,3,0	1/1:25,0:24:18.20:223,18,0	1/1:16,0:21:5.75:103,6,0	0/1:33,0:33:71.25:157,0,71	1/1:11,7:16:2:57,2,0	1/1:15,0:14:8.95:148,9,0	0/0:9,4:12:0.89:0,1,2	1/1:55,0:51:41.80:448,42,0	0/0:11,0:9:2.97:0,3,24	0/0:11,0:11:9.03:0,9,221	0/1:44,0:42:8.73:9,0,1030	1/1:19,0:18:3.01:53,3,0	1/1:19,0:17:2.69:27,3,0	1/1:25,0:25:18.77:205,19,0	1/1:2,0:2:5.81:34,6,0
chr10	64396372	.	GT	G	289.72	PASS	AB=0.960;AC=3;AF=0.054;AN=56;BaseQRankSum=1.960;DP=539;FS=29.589;HRun=7;HaplotypeScore=68.8156;InbreedingCoeff=0.6017;MQ=54.38;MQ0=36;MQRankSum=-1.869;QD=6.30;ReadPosRankSum=-0.429;VQSLOD=-0.4192;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:23,1:23:3.68:4,0,96	0/0:5,0:5:15:0,15,162	0/0:67,0:13:23.34:0,23,168	0/0:67,0:16:32.92:0,33,270	0/0:20,0:20:51.15:0,51,612	0/0:15,0:14:8.63:0,9,336	0/0:8,0:8:14.94:0,15,163	1/1:15,7:21:40.86:384,41,0	0/0:10,0:10:24.07:0,24,269	0/0:21,0:21:51.15:0,51,614	0/0:11,0:11:14.57:0,15,225	0/0:16,0:16:19.17:0,19,274	0/0:15,0:14:20.57:0,21,297	0/0:9,0:9:7.42:0,7,152	0/0:9,0:9:17.98:0,18,190	0/0:11,0:11:27.56:0,28,330	0/0:29,0:29:57.08:0,57,651	0/0:17,0:16:31.15:0,31,296	0/0:23,0:13:26.58:0,27,290	0/0:16,0:15:35.45:0,35,384	0/0:11,0:10:20.99:0,21,214	0/0:16,0:16:31.05:0,31,385	0/0:17,0:17:32.97:0,33,364	0/0:10,0:10:19.09:0,19,252	0/0:18,0:16:26.92:0,27,402	0/0:17,0:15:42.12:0,42,501	0/0:29,0:28:57.26:0,57,794	0/0:4,0:4:12.02:0,12,126
chr10	64396385	.	T	TTG	194.14	PASS	AB=0.714;AC=1;AF=0.018;AN=56;BaseQRankSum=0.926;DP=545;FS=7.497;HRun=0;HaplotypeScore=83.0745;InbreedingCoeff=-0.0224;MQ=60.82;MQ0=29;MQRankSum=1.103;QD=9.71;ReadPosRankSum=-2.343;VQSLOD=2.2146;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:25:32.57:0,33,331	0/0:6,0:6:17.95:0,18,170	0/0:74,0:14:8.84:0,9,114	0/0:60,0:14:19.30:0,19,167	0/0:19,0:19:56.92:0,57,617	0/0:13,0:12:33.07:0,33,359	0/0:8,0:8:18:0,18,172	0/1:12,8:20:99:269,0,127	0/0:12,0:12:32.32:0,32,300	0/0:20,0:20:55.60:0,56,557	0/0:14,0:13:29.47:0,29,270	0/0:14,0:14:33.04:0,33,342	0/0:16,0:15:33.02:0,33,384	0/0:12,0:12:23.97:0,24,236	0/0:11,0:11:21.05:0,21,237	0/0:13,0:13:20.99:0,21,228	0/0:29,0:29:54.08:0,54,581	0/0:17,0:16:38.98:0,39,392	0/0:14,0:8:23.97:0,24,222	0/0:16,0:15:44.85:0,45,442	0/0:7,0:6:16.78:0,17,144	0/0:17,0:17:38.85:0,39,346	0/0:20,0:20:53.94:0,54,521	0/0:12,0:12:27.03:0,27,344	0/0:19,0:18:51.01:0,51,546	0/0:19,0:18:53.88:0,54,528	0/0:30,0:29:74.81:0,75,770	0/0:6,0:6:18:0,18,168
chr10	64397043	.	T	TG	1412.09	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.965;DP=777;FS=1.326;HRun=4;HaplotypeScore=77.3551;InbreedingCoeff=0.9994;MQ=79.68;MQ0=0;MQRankSum=-4.944;QD=36.21;ReadPosRankSum=0.548;VQSLOD=3.7366;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,37:39:99:1507,111,0	0/0:14,0:14:39.11:0,39,442	0/0:21,0:21:55.53:0,56,542	0/0:18,0:18:44.23:0,44,431	0/0:33,0:33:90.22:0,90,994	0/0:16,0:16:48.13:0,48,537	0/0:28,0:28:75.18:0,75,831	0/0:34,0:34:81.13:0,81,890	0/0:25,0:25:75.18:0,75,837	0/0:32,0:32:93.23:0,93,1028	0/0:26,0:26:75.20:0,75,836	0/0:32,0:32:90.24:0,90,1010	0/0:28,0:28:81.21:0,81,899	0/0:39,0:39:99:0,111,1258	0/0:33,0:33:93.23:0,93,1035	0/0:35,0:35:96.24:0,96,1069	0/0:28,0:28:75.21:0,75,851	0/0:11,0:11:30.09:0,30,340	0/0:39,0:39:99:0,99,1115	0/0:19,0:19:51.11:0,51,553	0/0:44,0:44:99:0,126,1402	0/0:24,0:24:69.20:0,69,782	0/0:21,0:21:60.17:0,60,680	0/0:20,0:20:60.13:0,60,666	0/0:28,0:28:81.23:0,81,919	0/0:27,0:27:69.19:0,69,783	0/0:44,0:44:99:0,129,1421	0/0:19,0:19:54.15:0,54,612
chr10	64399351	.	GT	G	963.29	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=3.698;DP=445;FS=9.620;HRun=4;HaplotypeScore=55.1709;InbreedingCoeff=0.8455;MQ=72.37;MQ0=4;MQRankSum=0.493;QD=15.29;ReadPosRankSum=-0.201;VQSLOD=1.9557;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,15:16:24.07:276,24,0	0/0:8,0:8:24.04:0,24,272	0/0:25,0:16:23.53:0,24,182	0/1:12,0:4:6.03:6,0,37	0/0:23,0:23:60:0,60,650	0/0:9,0:9:20.96:0,21,206	0/0:10,0:10:24.93:0,25,308	1/1:5,18:23:54.03:517,54,0	1/1:3,8:11:27.54:310,28,0	0/0:13,0:13:36.10:0,36,449	0/0:16,0:16:41.32:0,41,498	0/0:8,0:8:23.97:0,24,275	0/0:10,0:10:30.07:0,30,383	0/0:12,0:12:33.06:0,33,383	0/0:14,0:14:42.08:0,42,526	0/0:22,0:22:60.16:0,60,758	0/0:25,0:25:60.89:0,61,612	0/0:27,0:27:63.07:0,63,726	0/0:17,0:17:37.86:0,38,470	0/0:16,0:16:46.57:0,47,494	0/0:12,0:12:30.07:0,30,359	0/0:4,0:4:12.01:0,12,133	0/0:13,0:14:29.03:0,29,340	0/0:14,0:14:13.24:0,13,331	0/0:21,0:21:51.13:0,51,628	0/0:27,0:27:65.26:0,65,730	0/0:20,0:20:54.07:0,54,660	0/0:15,0:14:40.73:0,41,388
chr10	64400366	.	C	CA	4698.02	PASS	AC=52;AF=1.000;AN=52;DP=150;FS=0.000;HRun=0;HaplotypeScore=29.1858;InbreedingCoeff=-0.0685;MQ=34.57;MQ0=1;QD=31.32;VQSLOD=4.3001;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,10:8:18.03:261,18,0	1/1:0,4:3:9.03:142,9,0	./.	./.	1/1:0,8:7:9.02:143,9,0	1/1:0,4:2:6.02:95,6,0	1/1:1,6:4:5.86:95,6,0	1/1:0,10:7:21.07:335,21,0	1/1:1,5:5:11.91:191,12,0	1/1:0,3:3:9.03:143,9,0	1/1:0,2:2:3.01:48,3,0	1/1:2,4:7:17.89:260,18,0	1/1:1,5:6:18.04:262,18,0	1/1:0,4:3:9.03:142,9,0	1/1:1,4:5:8.90:143,9,0	1/1:1,4:5:8.87:143,9,0	1/1:1,3:4:5.89:95,6,0	1/1:0,2:1:3.01:48,3,0	1/1:0,3:2:6.02:96,6,0	1/1:0,6:6:9.02:143,9,0	1/1:1,3:3:6.01:72,6,0	1/1:0,14:13:33.58:505,34,0	1/1:0,3:2:6.02:95,6,0	1/1:0,5:5:6.02:95,6,0	1/1:0,7:7:18.06:287,18,0	1/1:0,9:8:24.08:382,24,0	1/1:0,10:10:27.09:429,27,0	1/1:0,1:1:3.01:48,3,0
chr10	64400759	.	G	GA	5549.18	PASS	AB=0.668;AC=37;AF=0.661;AN=56;BaseQRankSum=-3.758;DP=627;FS=29.230;HRun=13;HaplotypeScore=75.4425;InbreedingCoeff=0.3614;MQ=58.44;MQ0=4;MQRankSum=0.475;QD=10.84;ReadPosRankSum=-0.363;VQSLOD=2.0041;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:36:54.82:343,55,0	0/1:6,6:12:26.15:69,0,26	0/0:13,0:9:13.61:0,14,83	0/0:13,0:7:1.32:0,1,30	1/1:14,13:26:17.16:392,17,0	1/1:3,14:18:12.28:237,12,0	0/1:6,15:20:18.82:265,0,19	0/0:27,1:28:7.83:0,8,262	0/0:25,0:24:53.43:0,53,366	1/1:15,9:23:22.62:330,23,0	1/1:3,9:12:14.97:130,15,0	0/1:10,16:27:7.34:228,0,7	0/0:23,0:23:56.75:0,57,370	1/1:9,21:31:39.03:359,39,0	0/1:8,22:31:13.86:301,0,14	1/1:6,18:24:9.84:360,10,0	1/1:11,9:21:38.99:347,39,0	1/1:5,14:19:3.45:175,3,0	1/1:15,11:26:22.04:306,22,0	1/1:7,10:19:26.63:208,27,0	0/1:9,9:18:20.10:118,0,20	1/1:8,12:20:27.03:251,27,0	0/0:10,0:11:25.83:0,26,170	0/1:32,1:35:36.02:36,0,303	1/1:8,9:19:28.62:258,29,0	1/1:15,15:30:30.46:420,30,0	0/1:10,20:29:33.40:310,0,33	1/1:8,2:10:13.22:107,13,0
chr10	64403242	.	CCT	C	555.84	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=4.163;DP=576;FS=1.703;HRun=0;HaplotypeScore=66.2586;InbreedingCoeff=0.9454;MQ=67.29;MQ0=6;MQRankSum=0.353;QD=15.88;ReadPosRankSum=-0.853;VQSLOD=3.4105;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:48.44:0,48,402	0/0:13,0:13:21.09:0,21,296	0/0:29,0:12:33.36:0,33,298	0/0:25,0:11:24.29:0,24,216	0/0:34,0:34:69.92:0,70,706	0/0:11,0:11:33.03:0,33,453	0/0:27,0:27:66.24:0,66,715	1/1:1,17:19:49.05:547,49,0	1/1:0,13:16:11.98:126,12,0	0/0:31,0:31:66.22:0,66,787	0/0:15,0:15:42.56:0,43,592	0/0:16,0:16:40.78:0,41,400	0/0:16,0:16:44.11:0,44,383	0/0:20,0:20:51.15:0,51,582	0/0:14,0:14:38.56:0,39,370	0/0:13,0:13:18.29:0,18,178	0/0:22,0:22:57.96:0,58,766	0/0:25,0:24:68.58:0,69,839	0/0:25,0:25:66.35:0,66,622	0/0:24,0:24:62.90:0,63,729	0/0:12,0:12:29.79:0,30,261	0/0:16,0:16:41.23:0,41,550	0/0:20,0:19:45.37:0,45,529	0/0:16,0:16:21.81:0,22,187	0/0:19,0:18:41.88:0,42,510	0/0:26,0:24:63.13:0,63,853	0/0:32,0:32:82.40:0,82,826	0/0:3,0:3:8.98:0,9,73
chr10	64403935	.	A	AG	4963.53	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-4.458;DP=784;FS=1.762;HRun=0;HaplotypeScore=76.5284;InbreedingCoeff=0.9997;MQ=82.60;MQ0=0;MQRankSum=-0.479;QD=43.16;ReadPosRankSum=0.088;VQSLOD=5.2544;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,39:39:99:1726,108,0	0/0:15,0:15:45.13:0,45,611	0/0:31,0:31:90.26:0,90,1222	0/0:15,0:15:39.13:0,39,533	0/0:24,0:24:72.24:0,72,1005	0/0:26,0:26:75.25:0,75,1049	0/0:37,0:37:99:0,108,1472	1/1:0,39:39:99:1751,111,0	1/1:2,35:37:93.32:1487,93,0	0/0:34,0:34:99:0,99,1381	0/0:14,0:14:42.14:0,42,587	0/0:36,0:36:99:0,108,1489	0/0:29,0:29:84.26:0,84,1153	0/0:21,0:21:63.21:0,63,880	0/0:50,0:50:99:0,141,1952	0/0:34,0:34:99:0,102,1409	0/0:32,0:32:93.31:0,93,1300	0/0:20,0:20:57.19:0,57,797	0/0:29,0:29:87.27:0,87,1184	0/0:25,0:25:72.24:0,72,1006	0/0:22,0:22:66.22:0,66,923	0/0:20,0:20:57.19:0,57,797	0/0:19,0:19:57.16:0,57,763	0/0:31,0:31:93.31:0,93,1298	0/0:24,0:24:69.21:0,69,931	0/0:29,0:29:81.27:0,81,1133	0/0:42,0:42:99:0,120,1661	0/0:10,0:10:29.13:0,29,384
chr10	64405734	.	T	TA	490.22	PASS	AB=0.924;AC=10;AF=0.179;AN=56;BaseQRankSum=-0.292;DP=523;FS=3.107;HRun=11;HaplotypeScore=61.4740;InbreedingCoeff=0.3398;MQ=75.31;MQ0=2;MQRankSum=-1.097;QD=3.23;ReadPosRankSum=-1.997;VQSLOD=-0.6629;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:11,18:28:0.87:268,0,1	0/0:6,0:6:14.93:0,15,116	0/1:27,0:21:11.22:11,0,114	0/1:14,0:9:2.16:12,0,2	0/0:26,0:27:40.11:0,40,304	0/0:23,0:24:28.64:0,29,335	0/0:15,0:15:32.85:0,33,255	1/1:15,6:18:7.35:195,7,0	1/1:9,4:13:7.02:107,7,0	0/0:20,0:20:38.66:0,39,293	0/0:22,0:22:40.90:0,41,320	0/0:18,0:19:34.99:0,35,263	0/0:18,0:18:35.77:0,36,273	0/0:14,0:14:23.89:0,24,183	0/0:15,0:17:30.69:0,31,243	0/0:13,0:13:28.92:0,29,213	0/0:26,1:32:11.88:0,12,429	0/0:17,1:18:8.36:0,8,244	0/0:16,0:16:29.66:0,30,219	0/0:24,0:26:34.81:0,35,261	0/0:11,0:11:0.97:0,1,119	0/0:10,0:10:26.85:0,27,201	0/1:7,0:7:4.66:5,0,78	0/0:18,1:19:2.37:0,2,201	0/0:21,0:23:45.86:0,46,337	0/0:19,0:21:42.88:0,43,312	0/1:22,1:25:25.28:25,0,255	0/1:15,0:15:0.51:1,0,176
chr10	64406082	.	CTTA	C	1097.39	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=6.431;DP=381;FS=22.233;HRun=0;HaplotypeScore=54.0818;InbreedingCoeff=0.9010;MQ=60.91;MQ0=4;MQRankSum=-6.628;QD=30.48;ReadPosRankSum=-1.230;VQSLOD=1.4333;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,13:16:30.10:489,30,0	0/0:5,0:5:15.05:0,15,335	0/0:14,0:10:24.06:0,24,468	0/0:19,0:9:21.07:0,21,404	0/0:31,0:31:78.27:0,78,1737	0/0:12,0:12:30.10:0,30,670	0/0:15,0:15:39.13:0,39,832	1/1:1,11:12:33.07:503,33,0	1/1:0,8:8:15.05:245,15,0	0/0:18,0:18:51.16:0,51,1069	0/0:14,0:14:39.13:0,39,858	0/0:5,0:5:12.04:0,12,267	0/0:10,0:10:30.10:0,30,662	0/0:12,0:12:30.10:0,30,670	0/0:12,0:12:36.12:0,36,785	0/0:11,0:11:27.09:0,27,603	0/0:30,0:30:78.27:0,78,1724	0/0:18,0:18:47.36:0,47,969	0/0:19,0:19:51.14:0,51,1077	0/0:23,0:23:63.19:0,63,1323	0/0:10,0:10:30.10:0,30,666	0/0:2,0:2:3.01:0,3,67	0/0:4,0:4:12.03:0,12,225	0/0:15,0:15:45.09:0,45,836	0/0:8,0:8:21.07:0,21,469	0/0:18,0:18:54.19:0,54,1205	0/0:14,0:14:39.10:0,39,804	0/0:5,0:5:15.05:0,15,316
chr10	64406242	.	AAAAAAACACACACAC	A	843.95	PASS	AB=0.667;AC=3;AF=0.054;AN=56;BaseQRankSum=5.659;DP=542;FS=2.240;HRun=0;HaplotypeScore=150.2710;InbreedingCoeff=0.7223;MQ=44.10;MQ0=46;MQRankSum=0.618;QD=27.22;ReadPosRankSum=1.735;VQSLOD=2.4141;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:24:33.42:0,33,477	0/0:5,0:5:13.60:0,14,391	0/0:48,0:5:15.05:0,15,422	0/0:39,0:5:12.03:0,12,271	0/0:26,0:22:61.31:0,61,1265	0/0:15,0:14:23.98:0,24,268	0/0:24,0:22:53.29:0,53,1389	0/1:11,11:20:1.48:616,0,1	1/1:5,4:9:8.26:324,8,0	0/0:19,0:18:54.01:0,54,1301	0/0:17,0:16:37.55:0,38,713	0/0:7,0:7:14.94:0,15,212	0/0:14,0:11:31.90:0,32,862	0/0:18,0:15:37.01:0,37,1104	0/0:16,0:15:42.08:0,42,1133	0/0:11,0:11:30.01:0,30,946	0/0:24,0:24:47.48:0,47,1550	0/0:20,0:20:28.65:0,29,938	0/0:22,0:15:42.11:0,42,1170	0/0:18,0:17:45.48:0,45,815	0/0:26,0:20:24.58:0,25,368	0/0:7,0:7:18.06:0,18,354	0/0:16,0:14:30.06:0,30,1522	0/0:22,0:22:36.12:0,36,1537	0/0:14,0:14:33.09:0,33,967	0/0:23,0:20:52.91:0,53,1619	0/0:19,0:15:33.35:0,33,823	0/0:15,0:14:39.12:0,39,1402
chr10	64406248	.	AC	A	3110.26	PASS	AB=1.000;AC=44;AF=0.786;AN=56;BaseQRankSum=-1.050;DP=468;FS=1.526;HRun=1;HaplotypeScore=41.2089;InbreedingCoeff=0.6679;MQ=49.25;MQ0=47;MQRankSum=1.755;QD=8.89;ReadPosRankSum=-1.782;VQSLOD=0.3092;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,0:16:8.69:48,9,0	1/1:4,0:4:9.41:69,9,0	0/0:55,0:8:15.61:0,16,100	0/1:45,0:8:9.80:10,0,54	1/1:21,0:18:32.24:217,32,0	1/1:1,7:7:0.47:1,0,0	1/1:16,0:14:30.28:234,30,0	1/1:15,0:13:6.30:44,6,0	1/1:5,0:5:7.43:29,7,0	1/1:9,9:17:9.91:192,10,0	1/1:3,7:9:17.01:102,17,0	1/1:10,0:10:14.99:127,15,0	0/0:11,0:8:11.06:0,11,91	1/1:15,0:12:21.33:170,21,0	1/1:12,0:11:18.47:157,18,0	0/1:11,0:11:0.37:148,0,0	1/1:21,1:22:14.63:181,15,0	1/1:17,0:17:24.42:197,24,0	1/1:20,0:14:14.34:182,14,0	1/1:13,0:12:13.49:83,13,0	0/0:13,10:17:1.48:0,1,20	1/1:5,0:5:5.92:42,6,0	0/0:13,0:11:26.94:0,27,229	0/0:16,0:16:32.17:0,32,217	1/1:12,0:12:24.33:195,24,0	1/1:21,0:18:34.61:330,35,0	1/1:20,0:16:33.83:268,34,0	1/1:13,0:13:32.77:253,33,0
chr10	64417504	.	AGGTTGTCCGCTT	A	1526.18	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.231;DP=745;FS=2.268;HRun=0;HaplotypeScore=245.1920;InbreedingCoeff=0.9996;MQ=84.44;MQ0=0;MQRankSum=-6.305;QD=84.79;ReadPosRankSum=0.796;VQSLOD=3.2585;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,114,6700	0/0:11,0:11:33.11:0,33,1953	0/0:23,0:23:69.19:0,69,3543	0/0:24,0:24:63.17:0,63,3114	0/0:31,0:31:90.30:0,90,5252	0/0:26,0:26:78.27:0,78,4703	0/0:23,0:23:69.24:0,69,4063	0/0:41,0:41:99:0,120,6534	1/1:2,16:18:42.14:1621,42,0	0/0:40,0:40:99:0,117,7041	0/0:23,0:23:69.24:0,69,4126	0/0:35,0:35:99:0,105,6432	0/0:16,0:16:45.15:0,45,2814	0/0:40,0:40:99:0,120,6926	0/0:28,0:28:81.28:0,81,4890	0/0:25,0:25:75.24:0,75,4535	0/0:34,0:34:99:0,102,6014	0/0:25,0:25:72.25:0,72,4346	0/0:15,0:15:45.15:0,45,2494	0/0:23,0:23:69.24:0,69,4087	0/0:36,0:36:99:0,102,6050	0/0:24,0:24:69.24:0,69,4064	0/0:33,0:33:99:0,99,6043	0/0:30,0:30:90.31:0,90,5380	0/0:13,0:13:39.13:0,39,2301	0/0:33,0:33:99:0,99,6002	0/0:21,0:21:63.19:0,63,3722	0/0:15,0:15:45.15:0,45,2751
chr10	64418415	.	TAGGACTA	T	4249.12	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=12.074;DP=761;FS=3.103;HRun=0;HaplotypeScore=177.9278;InbreedingCoeff=0.9989;MQ=81.06;MQ0=0;MQRankSum=-10.301;QD=44.26;ReadPosRankSum=-0.823;VQSLOD=4.3512;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,37:43:51.18:1343,51,0	0/0:9,0:9:27.09:0,27,1066	0/0:21,0:21:63.22:0,63,2147	0/0:23,0:23:60.21:0,60,2288	0/0:21,0:21:63.20:0,63,2389	0/0:31,0:31:93.32:0,93,3607	0/0:27,0:27:81.28:0,81,3249	1/1:8,20:28:60.17:1404,60,0	1/1:0,25:25:57.20:1501,57,0	0/0:37,0:37:99:0,105,4214	0/0:12,0:12:36.12:0,36,1436	0/0:32,0:32:93.32:0,93,3677	0/0:30,0:30:87.30:0,87,3475	0/0:32,0:32:96.33:0,96,3750	0/0:27,0:27:78.27:0,78,3123	0/0:26,0:26:78.27:0,78,3130	0/0:33,0:33:99:0,99,3903	0/0:21,0:21:60.21:0,60,2369	0/0:26,0:26:69.23:0,69,2678	0/0:30,0:30:90.31:0,90,3635	0/0:50,0:50:99:0,148,5934	0/0:30,0:30:84.27:0,84,3202	0/0:20,0:20:60.19:0,60,2204	0/0:33,0:33:96.32:0,96,3691	0/0:19,0:19:57.20:0,57,2261	0/0:33,0:33:99:0,99,3668	0/0:32,0:32:93.32:0,93,3657	0/0:10,0:10:24.08:0,24,968
chr10	64421378	.	T	TC	2065.54	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-5.770;DP=681;FS=18.934;HRun=1;HaplotypeScore=70.5718;InbreedingCoeff=0.9990;MQ=88.37;MQ0=0;MQRankSum=-1.261;QD=38.97;ReadPosRankSum=-0.274;VQSLOD=1.7192;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:93.29:0,93,1191	0/0:13,0:13:39.13:0,39,500	0/0:19,0:19:57.18:0,57,731	0/0:32,0:32:83.48:0,83,1045	0/0:11,0:11:27.07:0,27,336	0/0:19,0:19:57.19:0,57,740	0/0:24,0:24:72.22:0,72,920	1/1:1,24:25:72.20:1018,72,0	1/1:0,28:28:78.26:1169,78,0	0/0:19,0:19:54.18:0,54,701	0/0:12,0:12:30.10:0,30,386	0/0:20,0:20:54.18:0,54,701	0/0:33,0:33:93.27:0,93,1189	0/0:43,0:43:99:0,129,1674	0/0:29,0:29:87.26:0,87,1101	0/0:17,0:17:51.17:0,51,662	0/0:41,0:41:99:0,120,1558	0/0:19,0:19:54.18:0,54,701	0/0:26,0:26:75.22:0,75,948	0/0:19,0:19:48.15:0,48,620	0/0:55,0:55:99:0,150,1932	0/0:12,0:12:36.12:0,36,467	0/0:13,0:13:33.11:0,33,426	0/0:40,0:40:99:0,114,1466	0/0:20,0:20:57.19:0,57,739	0/0:17,0:17:51.16:0,51,650	0/0:24,0:24:72.23:0,72,935	0/0:18,0:18:45.10:0,45,540
chr10	64421785	.	TA	T	897.86	PASS	AB=0.722;AC=33;AF=0.589;AN=56;BaseQRankSum=-0.857;DP=408;FS=1.351;HRun=17;HaplotypeScore=45.8214;InbreedingCoeff=0.1307;MQ=54.67;MQ0=71;MQRankSum=1.521;QD=3.51;ReadPosRankSum=1.861;VQSLOD=-0.6752;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:18,3:18:22.89:130,23,0	1/1:5,5:10:8.68:50,9,0	0/0:51,0:8:3.87:0,4,25	0/0:46,0:12:15.43:0,15,74	1/1:8,13:22:19.86:112,20,0	1/1:10,1:10:9.79:53,10,0	1/1:4,0:2:2.92:17,3,0	0/0:25,0:7:0.25:0,0,19	1/1:5,0:6:6.11:18,6,0	0/1:5,6:9:6.27:66,0,6	1/1:5,4:9:8.70:49,9,0	1/1:4,0:4:5.75:33,6,0	0/0:6,0:6:2.99:0,3,24	0/1:7,0:7:6.46:6,0,17	1/1:7,0:7:2.79:17,3,0	1/1:1,4:5:2.76:17,3,0	1/1:15,3:15:23.13:131,23,0	0/1:7,2:14:1.56:57,0,2	0/1:11,9:14:15.59:75,0,16	0/1:10,5:11:7.77:28,0,8	0/1:8,0:6:9.13:9,0,19	0/0:3,4:6:0:0,0,0	0/0:8,0:8:3.46:0,3,25	0/0:3,0:1:2.99:0,3,24	1/1:11,0:11:14.42:83,14,0	0/1:9,0:14:5.34:60,0,5	0/1:3,4:8:14.54:15,0,16	0/1:9,13:16:11.37:28,0,11
chr10	64421962	.	G	GA	540.79	PASS	AB=0.895;AC=5;AF=0.089;AN=56;BaseQRankSum=-0.923;DP=521;FS=8.976;HRun=12;HaplotypeScore=56.2401;InbreedingCoeff=0.5649;MQ=58.03;MQ0=11;MQRankSum=1.754;QD=7.31;ReadPosRankSum=-0.700;VQSLOD=1.2941;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,26:32:29.01:430,29,0	0/0:12,0:12:29.81:0,30,219	0/0:15,0:2:2.98:0,3,22	0/0:10,0:6:3.83:0,4,37	0/0:17,0:17:4.81:0,5,186	0/0:14,0:15:19.84:0,20,137	0/0:19,0:19:44.71:0,45,327	1/1:10,1:23:37.62:214,38,0	0/0:12,1:13:8.66:0,9,217	0/0:18,0:19:50.47:0,50,362	0/1:14,2:17:24.70:25,0,151	0/0:15,0:15:35.73:0,36,259	0/0:15,1:16:12.58:0,13,253	0/0:12,0:12:24.02:0,24,182	0/0:19,0:20:26.78:0,27,341	0/0:20,0:20:48.96:0,49,353	0/0:36,0:35:73.32:0,73,525	0/0:25,0:24:59.40:0,59,429	0/0:21,3:24:3.58:0,4,304	0/0:16,0:15:32.73:0,33,236	0/0:19,1:21:17.27:0,17,270	0/0:10,0:10:29.83:0,30,219	0/0:10,0:8:8.90:0,9,65	0/0:19,0:20:52.68:0,53,372	0/0:21,0:22:58.69:0,59,420	0/0:23,1:25:32.43:0,32,391	0/0:12,0:15:34.81:0,35,243	0/0:18,0:17:41.72:0,42,303
chr10	64423850	.	A	AT	4318.67	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-12.711;DP=710;FS=7.527;HRun=0;HaplotypeScore=67.3678;InbreedingCoeff=0.9995;MQ=90.78;MQ0=0;MQRankSum=-3.361;QD=43.19;ReadPosRankSum=-2.132;VQSLOD=4.3268;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,40:42:99:1822,114,0	0/0:11,0:11:33.11:0,33,460	0/0:26,0:26:67.93:0,68,867	0/0:30,0:30:81.26:0,81,1093	0/0:22,0:22:66.22:0,66,918	0/0:25,0:25:72.23:0,72,988	0/0:38,0:38:99:0,114,1576	1/1:0,28:28:84.27:1298,84,0	1/1:0,30:30:75.26:1199,75,0	0/0:30,0:30:90.30:0,90,1257	0/0:17,0:17:48.16:0,48,660	0/0:27,0:27:81.26:0,81,1110	0/0:23,0:23:69.22:0,69,944	0/0:25,0:25:75.25:0,75,1049	0/0:17,0:17:51.16:0,51,696	0/0:19,0:19:57.19:0,57,797	0/0:31,0:31:93.30:0,93,1282	0/0:19,0:19:57.10:0,57,735	0/0:24,0:24:72.23:0,72,991	0/0:16,0:16:45.15:0,45,628	0/0:50,0:50:99:0,150,2080	0/0:21,0:21:63.21:0,63,874	0/0:19,0:19:54.17:0,54,738	0/0:34,0:34:99:0,102,1405	0/0:19,0:19:54.18:0,54,755	0/0:29,0:29:87.26:0,87,1181	0/0:29,0:27:87.29:0,87,1217	0/0:9,0:9:27.09:0,27,377
chr10	64426008	.	G	GT	3420.67	PASS	AB=0.500;AC=47;AF=0.870;AN=54;BaseQRankSum=0.437;DP=142;FS=21.419;HRun=1;HaplotypeScore=204.3810;InbreedingCoeff=0.3336;MQ=46.76;MQ0=0;MQRankSum=-2.975;QD=25.15;ReadPosRankSum=0.994;VQSLOD=1.0929;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,12:12:3.68:225,4,0	1/1:0,5:5:10.46:104,10,0	0/0:2,0:2:5.93:0,6,40	0/0:1,0:1:0.89:0,1,2	0/1:0,6:6:8.19:13,0,8	1/1:0,6:6:8.11:160,8,0	./.	1/1:0,9:9:22.57:145,23,0	1/1:0,6:6:17.95:241,18,0	1/1:0,4:4:12.04:181,12,0	1/1:0,4:4:9.84:94,10,0	1/1:0,5:5:14.72:190,15,0	1/1:0,5:5:2.10:46,2,0	1/1:0,7:7:12.36:193,12,0	1/1:0,7:7:21.02:288,21,0	1/1:0,5:5:12.04:179,12,0	1/1:0,1:1:3.01:44,3,0	1/1:0,1:1:3.01:45,3,0	0/0:0,3:3:5.06:0,5,21	1/1:0,5:5:9.97:105,10,0	1/1:0,3:3:1.38:38,1,0	1/1:0,6:6:10.65:103,11,0	1/1:0,1:1:3.01:41,3,0	1/1:0,5:5:0.51:75,1,0	1/1:0,6:6:10.85:139,11,0	1/1:0,8:8:19.29:202,19,0	1/1:0,12:12:21.07:299,21,0	1/1:0,7:7:18.06:270,18,0
chr10	64426021	.	T	TGG	413.76	PASS	AB=0.518;AC=28;AF=0.700;AN=40;BaseQRankSum=1.988;DP=68;FS=0.000;HRun=0;HaplotypeScore=170.2272;InbreedingCoeff=0.2065;MQ=29.69;MQ0=0;MQRankSum=1.525;QD=7.01;ReadPosRankSum=0.939;VQSLOD=2.9811;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,4:4:2.63:6,3,0	0/0:0,3:3:1.55:0,2,4	./.	./.	0/0:0,2:2:2.16:0,2,6	0/1:0,4:4:1.14:20,0,1	./.	./.	1/1:0,1:1:1.55:4,2,0	./.	0/1:1,3:4:1.83:23,0,2	1/1:0,1:1:2.04:6,2,0	0/1:0,3:3:1.16:8,0,1	1/1:0,5:5:2.84:63,3,0	1/1:2,1:3:1.32:4,1,0	1/1:1,3:4:5.86:50,6,0	./.	./.	0/0:0,3:3:2.97:0,3,10	1/1:1,3:4:3.79:47,4,0	1/1:0,1:1:1.82:5,2,0	0/1:0,5:5:1.87:27,0,2	./.	0/0:0,1:1:1.25:0,1,3	1/1:0,3:3:5.04:33,5,0	1/1:0,5:5:1.35:22,1,0	1/1:0,5:5:5.48:24,5,0	1/1:0,7:7:18.49:168,18,0
chr10	64426026	.	T	TA	185.15	PASS	AB=0.514;AC=36;AF=0.692;AN=52;BaseQRankSum=2.266;DP=153;FS=18.054;HRun=0;HaplotypeScore=193.1738;InbreedingCoeff=0.2441;MQ=30.27;MQ0=0;MQRankSum=1.110;QD=1.35;ReadPosRankSum=1.367;VQSLOD=0.9549;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:1,7:8:6.76:15,0,7	0/0:0,5:5:1.78:0,2,6	./.	./.	0/1:0,8:9:8.11:8,0,9	1/1:0,4:4:1.13:14,1,0	0/0:0,5:5:2.79:0,3,13	0/1:0,11:11:1.78:2,0,5	0/0:0,1:1:0.47:0,0,1	1/1:0,5:6:0.74:3,1,0	1/1:1,5:6:1.61:20,2,0	1/1:4,1:5:2.68:11,3,0	0/1:0,3:3:1.22:2,0,1	1/1:1,5:6:2.87:19,3,0	1/1:2,1:3:0.43:1,0,0	1/1:1,3:4:5.57:26,6,0	0/1:0,2:2:0:0,0,0	0/1:0,1:1:0:0,0,0	0/0:0,5:5:7.86:0,8,34	1/1:1,8:9:7.04:32,7,0	0/1:0,5:6:1.52:2,0,10	1/1:0,10:10:7.26:33,7,0	0/1:0,2:2:0:1,0,0	1/1:3,4:7:1.63:6,2,0	1/1:0,10:10:2.84:15,3,0	1/1:2,7:9:2.42:9,2,0	1/1:0,9:9:0.64:3,1,0	1/1:0,7:7:16.73:76,17,0
chr10	64426285	.	G	GT	185.88	PASS	AB=0.606;AC=32;AF=0.667;AN=48;BaseQRankSum=0.207;DP=204;FS=1.216;HRun=0;HaplotypeScore=398.4887;InbreedingCoeff=0.1916;MQ=29.04;MQ0=0;MQRankSum=0.198;QD=1.03;ReadPosRankSum=0.317;VQSLOD=0.5668;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:0,3:3:3.40:0,3,18	1/1:2,6:8:0.45:5,0,0	./.	./.	1/1:3,7:10:1.29:13,1,0	0/0:2,3:5:6.66:0,7,28	0/1:2,3:5:7.95:8,0,8	1/1:2,1:3:5.85:42,6,0	1/1:5,2:7:2.34:6,2,0	0/0:2,2:4:2.56:0,3,14	1/1:4,5:9:3.59:16,4,0	0/1:3,8:11:10.45:10,0,26	1/1:1,8:9:4.34:15,4,0	1/1:3,8:11:10.96:47,11,0	1/1:9,6:15:9.32:40,9,0	0/1:3,7:10:3.05:3,0,5	0/0:0,1:1:1.55:0,2,4	1/1:2,2:4:2.31:7,2,0	./.	1/1:3,3:6:0.42:1,0,0	./.	0/1:4,8:12:10.91:19,0,11	0/0:2,6:8:3.60:0,4,16	1/1:2,2:4:3.32:17,3,0	1/1:3,12:15:5.71:31,6,0	0/1:5,8:13:2.20:5,0,2	1/1:4,14:19:5.79:22,6,0	0/1:4,6:10:4.60:5,0,10
chr10	64426581	.	TCTTC	T	4390.23	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=11.889;DP=710;FS=4.623;HRun=0;HaplotypeScore=116.1400;InbreedingCoeff=0.9999;MQ=77.23;MQ0=0;MQRankSum=-0.858;QD=46.21;ReadPosRankSum=0.983;VQSLOD=5.6469;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,36:39:90.31:1707,90,0	0/0:12,0:12:36.12:0,36,962	0/0:22,0:22:54.18:0,54,1245	0/0:21,0:22:40.61:0,41,1314	0/0:22,0:22:57.20:0,57,1510	0/0:15,0:15:42.10:0,42,1071	0/0:28,0:28:81.28:0,81,2112	1/1:2,27:29:81.20:1375,81,0	1/1:0,27:27:69.24:1308,69,0	0/0:26,0:26:72.23:0,72,1823	0/0:18,0:18:54.19:0,54,1449	0/0:21,0:21:63.20:0,63,1580	0/0:21,0:21:60.21:0,60,1589	0/0:19,0:19:54.18:0,54,1425	0/0:24,0:24:72.20:0,72,1784	0/0:29,0:29:87.26:0,87,2105	0/0:36,0:36:99:0,105,2686	0/0:30,0:30:84.29:0,84,2264	0/0:21,0:21:57.19:0,57,1411	0/0:16,0:16:45.09:0,45,1148	0/0:38,0:38:99:0,114,3012	0/0:25,0:25:72.25:0,72,1872	0/0:15,0:15:36.12:0,36,889	0/0:32,0:32:93.32:0,93,2430	0/0:25,0:25:75.20:0,75,1950	0/0:31,0:31:87.30:0,87,2293	0/0:44,0:44:99:0,132,3384	0/0:23,0:23:63.18:0,63,1492
chr10	64428635	.	C	CTTG	3116.06	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-8.392;DP=772;FS=1.132;HRun=0;HaplotypeScore=110.6039;InbreedingCoeff=0.9975;MQ=83.79;MQ0=0;MQRankSum=-5.325;QD=47.21;ReadPosRankSum=1.398;VQSLOD=5.5070;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,36:40:99:2204,102,0	0/0:11,0:11:21.07:0,21,329	0/0:28,0:28:59.31:0,59,838	0/0:26,0:26:69.04:0,69,997	0/0:20,0:20:54.18:0,54,835	0/0:14,0:14:39.13:0,39,610	0/0:26,0:26:69.23:0,69,1079	0/0:27,0:27:69.23:0,69,1071	1/1:6,19:26:48.16:1033,48,0	0/0:37,0:37:90.31:0,90,1408	0/0:15,0:15:39.13:0,39,608	0/0:37,0:37:93.30:0,93,1420	0/0:24,0:24:66.21:0,66,1011	0/0:29,0:29:81.26:0,81,1235	0/0:42,0:42:99:0,117,1811	0/0:40,0:40:99:0,108,1645	0/0:28,0:28:75.26:0,75,1174	0/0:35,0:35:99:0,99,1549	0/0:29,0:29:81.22:0,81,1220	0/0:16,0:16:45.15:0,45,703	0/0:43,0:43:99:0,114,1747	0/0:15,0:15:33.10:0,33,494	0/0:27,0:27:78.26:0,78,1208	0/0:37,0:37:99:0,102,1558	0/0:21,0:21:51.17:0,51,798	0/0:36,1:37:37.35:0,37,1469	0/0:27,0:27:78.26:0,78,1208	0/0:15,0:15:33.11:0,33,516
chr10	64428849	.	T	TGCACTCCCCCTGAATG	15092.64	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=2.370;DP=692;FS=0.413;HRun=0;HaplotypeScore=289.3252;InbreedingCoeff=0.9989;MQ=75.12;MQ0=0;MQRankSum=-15.023;QD=145.12;ReadPosRankSum=-2.839;VQSLOD=3.8638;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:25,21:50:99:6883,120,0	0/0:19,0:19:54.16:0,54,2312	0/0:16,0:16:33.10:0,33,1212	0/0:15,0:15:36.73:0,37,1145	0/0:16,0:16:42.14:0,42,1890	0/0:23,0:23:63.22:0,63,2636	0/0:36,0:36:96.33:0,96,4248	1/1:24,0:24:66.23:2794,66,0	1/1:17,11:30:84.29:5416,84,0	0/0:23,0:23:66.21:0,66,2648	0/0:12,0:12:33.11:0,33,1517	0/0:28,0:28:81.28:0,81,3652	0/0:16,0:16:45.14:0,45,1800	0/0:32,0:32:87.27:0,87,3751	0/0:27,0:27:81.26:0,81,3431	0/0:28,0:28:78.25:0,78,3469	0/0:32,0:32:93.27:0,93,3751	0/0:24,0:24:72.25:0,72,3174	0/0:15,0:15:42.14:0,42,1703	0/0:18,0:18:54.19:0,54,2235	0/0:76,0:76:99:0,226,9640	0/0:15,0:15:45.15:0,45,2076	0/0:12,0:12:23.93:0,24,1119	0/0:34,0:34:93.26:0,93,4057	0/0:13,0:13:36.12:0,36,1551	0/0:25,0:25:66.70:0,67,2987	0/0:20,0:20:60.21:0,60,2747	0/0:13,0:13:36.12:0,36,1622
chr10	64429215	.	T	TC	766.80	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=1.072;DP=572;FS=0.781;HRun=3;HaplotypeScore=61.5069;InbreedingCoeff=0.9543;MQ=79.36;MQ0=0;MQRankSum=-4.781;QD=25.56;ReadPosRankSum=-2.336;VQSLOD=2.4078;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,29:30:71.81:862,72,0	0/0:7,0:7:15.05:0,15,180	0/0:14,0:14:26.79:0,27,303	0/0:17,0:17:45.13:0,45,530	0/0:29,0:29:78.22:0,78,915	0/0:19,0:19:51.14:0,51,600	0/0:27,0:27:78.22:0,78,923	0/0:24,0:24:69.18:0,69,791	0/0:20,0:20:57.16:0,57,673	0/0:20,0:20:60.17:0,60,709	0/0:17,0:17:50.86:0,51,565	0/0:20,0:20:57.17:0,57,684	0/0:16,0:16:45.14:0,45,539	0/0:19,0:19:51.16:0,51,612	0/0:19,0:19:57.15:0,57,663	0/0:12,0:12:33.10:0,33,396	0/0:46,0:46:99:0,132,1571	0/0:22,0:22:66.20:0,66,790	0/0:16,0:16:45.14:0,45,537	0/0:21,0:21:60.18:0,60,720	0/0:37,0:37:99:0,99,1174	0/0:14,0:14:39.11:0,39,456	0/0:19,0:19:51.14:0,51,592	0/0:18,0:18:54.17:0,54,647	0/0:22,0:22:60.14:0,60,703	0/0:23,0:23:69.20:0,69,811	0/0:20,0:20:48.15:0,48,575	0/0:4,0:4:12.04:0,12,143
chr10	64429344	.	AAAGAG	A	315.35	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.425;DP=511;FS=11.927;HRun=0;HaplotypeScore=100.8577;InbreedingCoeff=0.8562;MQ=58.37;MQ0=9;MQRankSum=-2.803;QD=13.71;ReadPosRankSum=2.242;VQSLOD=2.3694;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:15,8:21:29.30:410,29,0	0/0:9,0:9:12.50:0,13,241	0/0:12,0:7:6.68:0,7,214	0/0:14,0:8:12.04:0,12,245	0/0:15,0:15:24.94:0,25,410	0/0:17,0:17:36.07:0,36,779	0/0:20,0:20:47.62:0,48,1076	0/0:22,0:21:44.93:0,45,684	0/0:22,0:20:54.33:0,54,806	0/0:21,0:20:25.99:0,26,866	0/0:14,0:13:30.91:0,31,464	0/0:18,0:18:41.64:0,42,840	0/0:13,0:13:33:0,33,672	0/0:21,0:19:27.07:0,27,498	0/0:21,0:20:50.98:0,51,914	0/0:11,0:11:30.04:0,30,561	0/0:26,0:26:66.04:0,66,1165	0/0:18,0:18:28.37:0,28,438	0/0:19,0:17:35.32:0,35,758	0/0:23,0:22:47.93:0,48,872	0/0:14,0:14:33.53:0,34,703	0/0:11,0:11:18.06:0,18,436	0/0:20,0:19:45.08:0,45,817	0/0:26,0:26:45.13:0,45,997	0/0:21,0:21:55.26:0,55,1057	0/0:29,0:29:69.94:0,70,1376	0/0:19,0:18:34.31:0,34,601	0/0:12,0:11:30.09:0,30,699
chr10	64429597	.	T	TAATA	1568.02	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=1.289;DP=507;FS=0.776;HRun=0;HaplotypeScore=79.3638;InbreedingCoeff=0.8366;MQ=55.97;MQ0=8;MQRankSum=-6.232;QD=36.47;ReadPosRankSum=-2.265;VQSLOD=3.1178;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,12:21:33.11:750,33,0	0/0:8,0:8:21.07:0,21,365	0/0:6,0:3:9.03:0,9,141	0/0:4,0:2:5.69:0,6,63	0/0:21,0:20:36.10:0,36,578	0/0:23,0:23:48.16:0,48,830	0/0:13,0:12:27.08:0,27,442	0/0:41,0:35:78.26:0,78,1332	1/1:7,12:20:39.13:939,39,0	0/0:20,0:20:57.20:0,57,990	0/0:19,0:19:45.15:0,45,777	0/0:27,0:27:63.20:0,63,1068	0/0:12,0:12:24.08:0,24,414	0/0:17,0:17:42.14:0,42,726	0/0:17,0:16:42.13:0,42,702	0/0:20,0:20:48.14:0,48,805	0/0:27,0:26:66.18:0,66,1108	0/0:32,0:31:38.21:0,38,1118	0/0:21,0:20:45.14:0,45,736	0/0:24,0:24:60.18:0,60,988	0/0:9,0:9:21.07:0,21,365	0/0:3,0:3:3.01:0,3,47	0/0:12,0:12:30.09:0,30,494	0/0:6,0:6:18.04:0,18,285	0/0:23,0:23:63.21:0,63,1078	0/0:31,0:30:72.25:0,72,1249	0/0:20,0:19:54.18:0,54,939	0/0:8,0:8:21.07:0,21,359
chr10	64429612	.	TA	T	506.23	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.045;DP=526;FS=2.804;HRun=9;HaplotypeScore=57.9427;InbreedingCoeff=0.8281;MQ=64.19;MQ0=8;MQRankSum=-6.012;QD=18.08;ReadPosRankSum=-1.975;VQSLOD=3.2996;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,26:26:66.04:601,66,0	0/0:11,0:11:33.10:0,33,381	0/0:15,0:8:20.88:0,21,188	0/0:9,0:6:8.88:0,9,103	0/0:21,0:20:42.06:0,42,451	0/0:23,0:23:63.11:0,63,702	0/0:12,0:12:33.07:0,33,361	0/0:37,0:33:69.14:0,69,772	0/0:20,0:20:48.13:0,48,542	0/0:22,0:22:60.15:0,60,673	0/0:15,1:16:17.68:0,18,457	0/0:23,0:23:45.13:0,45,519	0/0:9,0:9:27.06:0,27,301	0/0:17,0:17:39.12:0,39,450	0/0:18,0:17:45.13:0,45,519	0/0:22,0:22:60.14:0,60,663	0/0:28,0:27:69.16:0,69,772	0/0:33,0:32:87.26:0,87,1002	0/0:24,0:24:69.20:0,69,792	0/0:23,0:23:57.17:0,57,658	0/0:6,0:6:15.04:0,15,173	0/0:3,0:3:5.98:0,6,54	0/0:13,0:13:39.10:0,39,440	0/0:6,0:6:18.05:0,18,208	0/0:26,0:26:69.20:0,69,796	0/0:30,0:29:81.23:0,81,927	0/0:23,0:23:57.17:0,57,655	0/0:8,0:8:24.07:0,24,277
chr10	64431328	.	AC	A	10321.68	PASS	AC=52;AF=0.963;AN=54;BaseQRankSum=-1.732;DP=333;FS=4.202;HRun=1;HaplotypeScore=83.8372;InbreedingCoeff=0.5425;MQ=42.75;MQ0=1;MQRankSum=-1.732;QD=31.37;ReadPosRankSum=1.593;VQSLOD=4.5962;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,23:21:42.14:586,42,0	1/1:0,7:7:15.05:209,15,0	./.	0/0:2,0:1:1.82:0,2,5	1/1:0,21:21:48.16:667,48,0	1/1:0,11:11:21.03:270,21,0	1/1:0,5:5:12.04:167,12,0	1/1:0,31:30:87.29:1212,87,0	1/1:0,14:14:27.09:376,27,0	1/1:0,14:14:42.14:586,42,0	1/1:0,14:14:24.08:333,24,0	1/1:0,8:8:18.06:251,18,0	1/1:0,12:12:30.10:418,30,0	1/1:0,10:10:21.07:292,21,0	1/1:0,17:17:36.12:501,36,0	1/1:0,21:21:48.16:669,48,0	1/1:0,16:15:36.12:502,36,0	1/1:0,8:8:24.08:334,24,0	1/1:0,8:8:24.07:319,24,0	1/1:0,10:10:21.03:271,21,0	1/1:0,6:4:9.03:126,9,0	1/1:0,5:5:15.05:209,15,0	1/1:0,11:10:15.01:187,15,0	1/1:0,9:9:15.05:209,15,0	1/1:0,9:9:12.04:167,12,0	1/1:0,15:15:45.15:623,45,0	1/1:0,19:19:48.16:669,48,0	1/1:0,5:5:12.04:167,12,0
chr10	64434685	.	GTGT	G	1268.52	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.557;DP=520;FS=10.136;HRun=0;HaplotypeScore=79.1416;InbreedingCoeff=0.9804;MQ=66.78;MQ0=0;MQRankSum=-1.722;QD=30.94;ReadPosRankSum=0.452;VQSLOD=3.0147;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:19:36.12:369,36,0	0/0:6,0:6:18.06:0,18,414	0/0:10,0:9:24:0,24,484	0/0:11,0:11:17.84:0,18,330	0/0:16,0:16:45.15:0,45,971	0/0:19,0:19:48.15:0,48,998	0/0:28,0:28:81.28:0,81,1813	0/0:22,0:22:29.39:0,29,921	1/1:0,21:22:57.19:1021,57,0	0/0:19,0:19:54.15:0,54,1088	0/0:13,0:13:33.11:0,33,670	0/0:28,0:28:84.27:0,84,1796	0/0:12,0:12:36.12:0,36,806	0/0:26,0:26:78.23:0,78,1691	0/0:34,0:34:99:0,99,2122	0/0:21,0:21:63.18:0,63,1273	0/0:28,0:28:81.27:0,81,1798	0/0:22,0:22:63.19:0,63,1322	0/0:14,0:14:42.14:0,42,917	0/0:12,0:12:33.09:0,33,693	0/0:39,0:39:99:0,114,2359	0/0:5,0:5:15.05:0,15,339	0/0:8,0:8:24.08:0,24,520	0/0:27,0:27:78.27:0,78,1750	0/0:10,0:10:30.10:0,30,664	0/0:21,0:21:60.19:0,60,1298	0/0:17,0:17:51.17:0,51,1088	0/0:11,0:11:33.08:0,33,565
chr10	64434687	.	GT	G	409.50	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.927;DP=525;FS=11.560;HRun=1;HaplotypeScore=64.3787;InbreedingCoeff=0.9433;MQ=65.10;MQ0=0;MQRankSum=-2.351;QD=9.75;ReadPosRankSum=-0.093;VQSLOD=-0.0611;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,6:20:33.57:236,34,0	0/0:7,0:7:21.05:0,21,280	0/0:10,0:9:27.06:0,27,325	0/0:11,0:11:20.82:0,21,230	0/0:17,0:17:45.01:0,45,576	0/0:22,0:22:48.10:0,48,628	0/0:29,0:29:84.24:0,84,1146	0/0:22,0:22:7.18:0,7,343	1/1:21,1:22:54.83:295,55,0	0/0:17,0:17:45.12:0,45,618	0/0:13,0:13:35.96:0,36,412	0/0:27,0:27:81.23:0,81,1115	0/0:13,0:13:39.09:0,39,518	0/0:25,0:25:75.22:0,75,1019	0/0:33,0:33:93.27:0,93,1273	0/0:19,0:19:57.13:0,57,727	0/0:29,0:29:84.21:0,84,1142	0/0:20,0:20:60.09:0,60,790	0/0:14,0:14:42.09:0,42,531	0/0:14,0:14:30.07:0,30,411	0/0:43,0:43:99:0,114,1486	0/0:5,0:5:14.98:0,15,188	0/0:8,0:8:24.03:0,24,319	0/0:27,0:27:78.23:0,78,1076	0/0:11,0:11:30.07:0,30,392	0/0:20,0:20:57.17:0,57,765	0/0:17,0:17:51.13:0,51,673	0/0:10,0:10:23.02:0,23,298
chr10	64434688	.	T	TG	520.96	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-3.139;DP=523;FS=10.194;HRun=8;HaplotypeScore=64.8480;InbreedingCoeff=0.9539;MQ=65.30;MQ0=0;MQRankSum=0.034;QD=8.01;ReadPosRankSum=-2.876;VQSLOD=0.0871;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:19:15.19:79,15,0	0/0:8,0:8:21:0,21,188	0/0:10,0:9:24.01:0,24,219	0/0:12,0:12:14.87:0,15,127	0/0:17,0:17:41.95:0,42,375	0/0:22,0:22:42:0,42,383	0/0:29,0:29:78.04:0,78,713	1/1:6,18:24:51.09:554,51,0	1/1:22,0:22:10.22:23,10,0	0/0:18,0:18:42.01:0,42,384	0/0:13,0:13:24.01:0,24,219	0/0:28,0:28:72.02:0,72,659	0/0:13,0:13:36:0,36,324	0/0:25,0:25:69.04:0,69,631	0/0:32,0:32:84.01:0,84,759	0/0:19,0:19:45.02:0,45,412	0/0:29,0:29:81.01:0,81,734	0/0:19,0:19:51.02:0,51,466	0/0:14,0:14:33.01:0,33,302	0/0:13,0:13:27:0,27,247	0/0:43,0:43:99:0,102,928	0/0:5,0:5:12:0,12,110	0/0:8,0:8:21.01:0,21,192	0/0:27,0:27:72.04:0,72,659	0/0:10,0:10:24:0,24,220	0/0:20,0:20:42.01:0,42,384	0/0:17,0:17:45.02:0,45,412	0/0:6,0:7:20.05:0,20,170
chr10	64436341	.	C	CT	1881.82	PASS	AB=1.000;AC=53;AF=0.946;AN=56;BaseQRankSum=2.490;DP=175;FS=2.410;HRun=0;HaplotypeScore=116.8243;InbreedingCoeff=0.3443;MQ=43.04;MQ0=0;MQRankSum=-1.986;QD=10.88;ReadPosRankSum=1.930;VQSLOD=4.2758;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,0:4:7.95:32,8,0	1/1:3,0:3:8.44:41,8,0	0/1:1,0:1:0:0,0,0	0/0:1,0:2:2.54:0,3,16	1/1:5,1:6:17.05:121,17,0	1/1:13,0:13:24.56:126,25,0	1/1:6,1:7:19.31:106,19,0	1/1:14,0:14:37.20:188,37,0	1/1:3,1:4:11.16:71,11,0	1/1:7,0:7:9.76:73,10,0	1/1:2,0:2:5.02:20,5,0	1/1:2,0:2:5.42:23,5,0	1/1:6,0:6:10.85:46,11,0	1/1:6,0:6:10.35:40,10,0	1/1:11,1:12:21.98:119,22,0	1/1:13,0:12:29.86:129,30,0	1/1:9,0:9:16.31:73,16,0	1/1:8,0:8:19.02:90,19,0	1/1:8,1:9:20.71:138,21,0	1/1:4,0:4:11.23:53,11,0	1/1:3,0:2:2.68:11,3,0	1/1:1,0:1:2.60:10,3,0	1/1:2,0:2:2.80:13,3,0	1/1:3,0:3:2.60:10,3,0	1/1:6,0:6:16.24:75,16,0	1/1:11,0:11:25.17:119,25,0	1/1:12,0:12:31.82:134,32,0	1/1:4,0:4:11.64:108,12,0
chr10	64436350	.	TG	T	5464.53	PASS	AC=52;AF=0.963;AN=54;BaseQRankSum=1.617;DP=194;FS=0.000;HRun=3;HaplotypeScore=117.0992;InbreedingCoeff=0.2789;MQ=41.77;MQ0=0;MQRankSum=-1.732;QD=28.61;ReadPosRankSum=1.039;VQSLOD=4.0676;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,7:6:12.04:145,12,0	1/1:0,3:3:9.03:111,9,0	./.	0/0:2,0:2:3:0,3,25	1/1:1,7:8:21.06:249,21,0	1/1:0,14:14:27.08:331,27,0	1/1:0,6:6:18.06:222,18,0	1/1:0,16:16:45.14:554,45,0	1/1:0,3:3:9.03:111,9,0	1/1:1,6:7:15.05:186,15,0	1/1:0,2:2:3.01:36,3,0	1/1:0,3:3:9.03:108,9,0	1/1:0,6:6:15.05:186,15,0	1/1:0,8:8:18.06:217,18,0	1/1:0,11:11:21.07:259,21,0	1/1:0,15:14:39.12:476,39,0	1/1:0,10:10:21.07:257,21,0	1/1:0,10:10:21.06:258,21,0	1/1:3,7:10:18.05:222,18,0	1/1:0,4:4:12.04:148,12,0	1/1:0,3:2:3.01:37,3,0	1/1:0,2:2:6.02:70,6,0	1/1:0,2:2:6.02:71,6,0	1/1:0,3:3:2.92:37,3,0	1/1:1,7:8:21.06:255,21,0	1/1:1,10:11:27.08:334,27,0	1/1:0,15:15:45.14:548,45,0	1/1:3,1:4:3.01:37,3,0
chr10	64436371	.	CT	C	5777.76	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=2.641;DP=197;FS=0.000;HRun=2;HaplotypeScore=118.6220;InbreedingCoeff=0.4684;MQ=52.03;MQ0=0;MQRankSum=-3.413;QD=30.41;ReadPosRankSum=3.220;VQSLOD=4.4351;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,8:8:12.04:155,12,0	1/1:0,3:3:9.03:116,9,0	0/0:2,0:2:2.96:0,3,19	0/0:3,1:4:7.95:0,8,66	1/1:0,8:8:24.08:310,24,0	1/1:1,14:15:30.10:387,30,0	1/1:2,2:4:6.02:77,6,0	1/1:2,21:22:54.17:687,54,0	1/1:1,3:4:9.03:116,9,0	1/1:0,6:6:15.05:194,15,0	1/1:0,1:1:3.01:39,3,0	1/1:0,5:5:15.05:194,15,0	1/1:1,5:6:12.04:155,12,0	1/1:0,7:7:21.07:270,21,0	1/1:0,9:9:24.08:310,24,0	1/1:1,14:15:42.14:542,42,0	1/1:1,11:12:21.07:271,21,0	1/1:1,8:9:18.06:233,18,0	1/1:0,6:6:18.06:232,18,0	1/1:0,4:4:6.02:77,6,0	1/1:0,3:2:3.01:39,3,0	1/1:0,3:3:9.03:116,9,0	1/1:0,2:2:6.02:77,6,0	1/1:0,4:4:8.96:112,9,0	1/1:1,7:8:18.06:232,18,0	1/1:0,12:12:33.11:427,33,0	1/1:1,10:10:30.08:373,30,0	1/1:0,1:1:3.01:39,3,0
chr10	64436402	.	AT	A	5729.75	PASS	AB=0.600;AC=49;AF=0.942;AN=52;BaseQRankSum=0.113;DP=209;FS=0.000;HRun=3;HaplotypeScore=109.1149;InbreedingCoeff=0.1477;MQ=44.57;MQ0=0;MQRankSum=-2.435;QD=28.65;ReadPosRankSum=1.756;VQSLOD=4.0512;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,9:10:21.07:259,21,0	./.	0/1:1,2:2:26.10:31,0,26	0/0:3,1:3:0.47:0,0,1	1/1:0,13:13:23.87:279,24,0	1/1:0,10:10:23.99:262,24,0	1/1:0,2:2:6.02:74,6,0	1/1:2,20:21:57.14:686,57,0	1/1:0,2:2:6.02:74,6,0	1/1:0,7:6:18.06:221,18,0	1/1:0,6:6:17.66:175,18,0	1/1:0,6:6:15.05:185,15,0	1/1:2,4:5:9.03:111,9,0	1/1:0,11:11:33.01:372,33,0	1/1:0,13:12:33.05:389,33,0	1/1:1,15:15:42.13:519,42,0	1/1:1,8:9:21.07:259,21,0	1/1:2,6:8:15.05:183,15,0	1/1:1,3:4:12:131,12,0	1/1:0,2:2:6.02:74,6,0	./.	1/1:0,3:3:6.02:74,6,0	1/1:1,3:4:11.97:129,12,0	1/1:1,3:4:6.02:74,6,0	1/1:0,11:11:27.04:316,27,0	1/1:3,10:13:30.09:371,30,0	1/1:0,12:11:33.10:407,33,0	1/1:0,2:2:6.02:74,6,0
chr10	64436667	.	AAAAAC	A	577.42	PASS	AC=4;AF=0.077;AN=52;BaseQRankSum=5.615;DP=526;FS=2.476;HRun=0;HaplotypeScore=90.0889;InbreedingCoeff=0.7520;MQ=62.87;MQ0=9;MQRankSum=-0.155;QD=15.20;ReadPosRankSum=-0.234;VQSLOD=2.6902;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,17:30:33.11:585,33,0	0/0:2,0:2:3.01:0,3,83	./.	./.	0/0:23,0:23:42.06:0,42,1012	0/0:23,0:23:42.14:0,42,1161	0/0:28,0:28:27.01:0,27,620	0/0:29,0:27:4.35:0,4,11	1/1:5,0:8:9.03:105,9,0	0/0:17,0:17:30.09:0,30,741	0/0:7,0:7:6.02:0,6,148	0/0:17,0:17:48.16:0,48,1298	0/0:11,0:11:18.04:0,18,399	0/0:14,0:14:36.12:0,36,924	0/0:18,0:18:33.11:0,33,913	0/0:11,0:10:21.07:0,21,581	0/0:31,0:31:54.12:0,54,1246	0/0:20,0:20:21.07:0,21,578	0/0:21,0:21:15.05:0,15,378	0/0:14,0:14:33.11:0,33,892	0/0:13,0:13:21.05:0,21,452	0/0:8,0:8:14.88:0,15,310	0/0:14,0:14:24.08:0,24,624	0/0:38,0:37:78.27:0,78,2054	0/0:19,0:18:30.10:0,30,829	0/0:14,0:14:24.07:0,24,551	0/0:24,0:23:45.15:0,45,1201	0/0:4,0:4:9.03:0,9,239
chr10	64437595	.	CTT	C	681.65	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.456;DP=593;FS=0.630;HRun=15;HaplotypeScore=77.4738;InbreedingCoeff=0.8556;MQ=64.28;MQ0=2;MQRankSum=0.948;QD=10.99;ReadPosRankSum=2.890;VQSLOD=2.7150;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:19,21:43:61.28:584,61,0	0/0:11,0:12:29.58:0,30,366	0/0:14,0:9:8.98:0,9,88	0/0:5,0:4:1.86:0,2,4	0/0:24,1:28:27.11:0,27,556	0/0:21,0:21:46.88:0,47,484	0/0:22,0:25:49.90:0,50,602	0/0:17,0:29:63:0,63,636	1/1:7,11:19:23.16:218,23,0	0/0:26,0:28:44.53:0,45,500	0/0:16,0:16:28.62:0,29,289	0/0:22,1:26:28.21:0,28,489	0/0:15,0:17:38.04:0,38,420	0/0:18,0:22:38.39:0,38,387	0/0:32,0:34:71.98:0,72,769	0/0:24,0:26:57.05:0,57,656	0/0:14,0:15:35.52:0,36,372	0/0:14,0:18:35.44:0,35,426	0/0:14,0:14:33.08:0,33,415	0/0:18,0:18:42.06:0,42,487	0/0:17,0:17:42.10:0,42,525	0/0:20,0:21:10.37:0,10,302	0/0:14,0:15:23.50:0,24,226	0/0:14,1:19:44.55:0,45,483	0/0:18,0:21:43.41:0,43,510	0/0:28,0:32:64.66:0,65,691	0/0:30,0:33:77.54:0,78,869	0/0:5,0:5:8.49:0,8,72
chr10	64438929	.	CT	C	833.45	PASS	AB=0.900;AC=3;AF=0.054;AN=56;BaseQRankSum=7.548;DP=641;FS=6.674;HRun=10;HaplotypeScore=66.2794;InbreedingCoeff=0.5939;MQ=77.58;MQ0=0;MQRankSum=-0.064;QD=14.13;ReadPosRankSum=1.073;VQSLOD=3.6906;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,41:41:99:912,105,0	0/0:6,0:6:15.04:0,15,166	0/0:29,0:27:42.82:0,43,433	0/1:16,2:14:27.81:28,0,149	0/0:32,1:33:49.15:0,49,770	0/0:23,0:23:60.16:0,60,664	0/0:27,0:27:60.14:0,60,654	0/0:23,2:26:8.54:0,9,520	0/0:22,0:22:51.11:0,51,552	0/0:27,0:27:72.19:0,72,796	0/0:27,0:26:57.13:0,57,621	0/0:26,0:26:69.11:0,69,724	0/0:18,0:18:39.11:0,39,431	0/0:16,0:16:39.08:0,39,415	0/0:16,0:16:39.11:0,39,431	0/0:23,0:23:54.14:0,54,590	0/0:26,0:26:75.16:0,75,815	0/0:12,0:12:27.04:0,27,286	0/0:23,2:25:14.06:0,14,605	0/0:23,0:23:57.09:0,57,608	0/0:30,0:30:60.16:0,60,664	0/0:14,2:16:13.01:0,13,359	0/0:23,0:23:69.19:0,69,763	0/0:23,0:23:69.19:0,69,763	0/0:22,0:23:64.80:0,65,667	0/0:27,1:28:43.13:0,43,704	0/0:18,0:18:54.13:0,54,587	0/0:16,0:15:36.09:0,36,398
chr10	64439184	.	GA	G	369.94	PASS	AB=1.000;AC=3;AF=0.056;AN=54;BaseQRankSum=5.487;DP=589;FS=0.000;HRun=10;HaplotypeScore=75.0106;InbreedingCoeff=0.5479;MQ=53.50;MQ0=15;MQRankSum=1.471;QD=7.71;ReadPosRankSum=2.453;VQSLOD=1.8742;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:13,21:32:53.95:463,54,0	0/0:20,1:20:10.04:0,10,332	0/0:10,0:2:2.72:0,3,20	./.	0/0:22,0:22:41.93:0,42,396	0/0:16,0:16:31.97:0,32,310	0/0:24,1:21:24.95:0,25,463	0/0:25,0:23:53.33:0,53,550	0/0:23,0:23:45.08:0,45,450	0/0:26,2:27:34.98:0,35,590	0/0:26,0:26:48.53:0,49,477	0/0:14,0:14:23.94:0,24,237	0/0:16,1:21:19.52:0,20,382	0/0:17,0:17:26.02:0,26,231	0/0:25,0:25:62.77:0,63,625	0/0:21,1:21:57.46:0,57,572	0/0:28,0:28:56.86:0,57,564	0/0:23,0:22:25.26:0,25,456	0/0:29,1:28:62.61:0,63,651	0/0:17,0:16:6.81:0,7,272	0/0:14,0:13:15.51:0,16,166	0/0:20,0:19:33.06:0,33,343	0/1:14,0:14:6.28:6,0,232	0/0:21,0:20:41.85:0,42,443	0/0:19,0:19:44.84:0,45,452	0/0:27,0:27:45:0,45,443	0/0:27,0:26:54.08:0,54,559	0/0:16,0:15:24.02:0,24,238
chr10	64439195	.	GAAA	G	747.22	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=5.766;DP=613;FS=2.657;HRun=13;HaplotypeScore=91.0748;InbreedingCoeff=0.7572;MQ=57.38;MQ0=8;MQRankSum=1.756;QD=10.52;ReadPosRankSum=4.223;VQSLOD=0.7582;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:12,23:33:47.93:552,48,0	0/0:14,0:15:39.11:0,39,666	0/1:14,0:4:7.68:8,0,70	0/0:13,0:5:8.80:0,9,74	0/0:30,0:31:84.13:0,84,1262	0/0:19,0:19:44.95:0,45,587	0/0:21,0:21:54.53:0,55,846	0/0:26,0:27:63.13:0,63,1012	1/1:6,16:22:10.31:308,10,0	0/0:30,0:30:75.14:0,75,1268	0/0:25,0:26:61.64:0,62,977	0/0:11,0:14:32.86:0,33,424	0/0:23,0:23:51.02:0,51,779	0/0:14,0:15:36.09:0,36,575	0/0:24,0:27:75.23:0,75,1312	0/0:26,0:26:66.15:0,66,1106	0/0:29,0:29:64.54:0,65,1066	0/0:20,0:21:56.33:0,56,898	0/0:26,0:34:78.11:0,78,1079	0/0:18,0:19:47.94:0,48,700	0/0:6,0:9:15.04:0,15,232	0/0:16,0:15:27:0,27,414	0/0:14,0:16:39.10:0,39,647	0/0:16,0:18:37.03:0,37,613	0/0:19,0:20:45.13:0,45,780	0/0:25,0:25:69.10:0,69,1049	0/0:23,0:23:62.71:0,63,971	0/0:18,0:17:42.10:0,42,725
chr10	64440277	.	GACA	G	486.16	PASS	AB=0.766;AC=2;AF=0.036;AN=56;BaseQRankSum=6.363;DP=572;FS=9.909;HRun=0;HaplotypeScore=89.8808;InbreedingCoeff=-0.0383;MQ=86.84;MQ0=1;MQRankSum=6.212;QD=12.79;ReadPosRankSum=-2.744;VQSLOD=2.0786;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:75.26:0,75,1848	0/0:4,0:4:12.04:0,12,248	0/1:15,8:23:99:411,0,744	0/1:11,4:15:99:164,0,506	0/0:10,0:10:27.09:0,27,665	0/0:16,0:16:48.15:0,48,1105	0/0:31,0:31:93.29:0,93,2169	0/0:20,0:20:60.21:0,60,1436	0/0:25,0:25:75.26:0,75,1840	0/0:15,0:15:45.14:0,45,1025	0/0:11,0:11:30.54:0,31,595	0/0:27,0:27:81.26:0,81,1865	0/0:20,0:20:60.21:0,60,1478	0/0:21,0:21:63.18:0,63,1449	0/0:13,0:13:39.13:0,39,937	0/0:17,0:17:51.18:0,51,1257	0/0:27,0:27:81.21:0,81,1839	0/0:25,0:25:75.26:0,75,1790	0/0:21,0:21:63.22:0,63,1548	0/0:13,0:13:39.13:0,39,936	0/0:61,0:60:99:0,172,4163	0/0:9,0:9:27.09:0,27,637	0/0:11,0:11:33.11:0,33,789	0/0:37,0:37:99:0,108,2600	0/0:11,0:11:33.11:0,33,813	0/0:21,0:21:63.22:0,63,1536	0/0:27,0:27:81.23:0,81,1825	0/0:16,0:16:48.16:0,48,1181
chr10	64441983	.	GGTCT	G	5405.56	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=13.454;DP=799;FS=0.815;HRun=0;HaplotypeScore=128.1536;InbreedingCoeff=0.9971;MQ=83.49;MQ0=0;MQRankSum=-5.811;QD=47.42;ReadPosRankSum=0.350;VQSLOD=5.5448;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,38:41:99:1895,105,0	0/0:6,0:6:18.06:0,18,475	0/0:29,0:29:72.24:0,72,1723	0/0:21,0:21:56.86:0,57,1288	0/0:33,0:33:96.33:0,96,2506	0/0:30,0:30:90.29:0,90,2319	0/0:21,0:20:60.21:0,60,1524	1/1:5,32:37:96.33:1744,96,0	1/1:2,33:36:96.33:1766,96,0	0/0:29,0:29:81.28:0,81,2077	0/0:25,0:25:72.23:0,72,1826	0/0:28,0:28:84.29:0,84,2207	0/0:23,0:23:69.22:0,69,1766	0/0:24,0:24:69.24:0,69,1822	0/0:41,0:41:99:0,117,3027	0/0:32,0:32:93.32:0,93,2437	0/0:26,0:26:72.25:0,72,1902	0/0:20,0:20:51.18:0,51,1345	0/0:19,0:19:48.16:0,48,1268	0/0:49,0:49:99:0,141,3658	0/0:39,0:39:99:0,108,2797	0/0:36,0:36:99:0,99,2614	0/0:26,0:26:75.26:0,75,1979	0/0:31,0:31:90.31:0,90,2366	0/0:20,0:20:60.21:0,60,1585	0/0:25,0:25:75.26:0,75,1955	0/0:25,0:25:72.22:0,72,1726	0/0:27,0:27:78.27:0,78,2059
chr10	64443772	.	AGAAC	A	1486.51	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.752;DP=739;FS=0.736;HRun=0;HaplotypeScore=119.0130;InbreedingCoeff=0.9701;MQ=84.57;MQ0=0;MQRankSum=-7.519;QD=57.17;ReadPosRankSum=-3.503;VQSLOD=3.9752;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,102,2842	0/0:16,0:16:45.15:0,45,1270	0/0:28,0:28:84.29:0,84,2362	0/0:23,0:23:63.22:0,63,1759	0/0:16,0:16:48.16:0,48,1349	0/0:16,0:16:48.16:0,48,1333	0/0:32,0:32:96.33:0,96,2694	1/1:0,26:26:78.25:1581,78,0	0/0:28,0:28:84.29:0,84,2332	0/0:30,0:30:86.51:0,87,2454	0/0:16,0:16:48.15:0,48,1236	0/0:36,0:36:99:0,105,2889	0/0:31,0:31:90.30:0,90,2472	0/0:34,0:34:99:0,102,2842	0/0:34,0:34:99:0,102,2956	0/0:27,0:27:81.28:0,81,2318	0/0:40,0:40:99:0,120,3428	0/0:35,0:35:99:0,102,2946	0/0:12,0:12:36.10:0,36,973	0/0:13,0:13:39.13:0,39,1076	0/0:63,0:63:99:0,190,5340	0/0:20,0:20:60.21:0,60,1673	0/0:15,0:15:45.15:0,45,1303	0/0:32,0:32:93.32:0,93,2695	0/0:21,0:20:63.22:0,63,1797	0/0:30,0:30:90.31:0,90,2529	0/0:26,0:26:78.27:0,78,2207	0/0:4,0:4:12.04:0,12,318
chr10	64445804	.	G	GC	362.98	PASS	AB=0.938;AC=8;AF=0.143;AN=56;BaseQRankSum=4.634;DP=341;FS=8.461;HRun=9;HaplotypeScore=48.3028;InbreedingCoeff=0.5882;MQ=86.08;MQ0=0;MQRankSum=-2.842;QD=7.41;ReadPosRankSum=-1.809;VQSLOD=0.2175;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:10,14:24:37.23:401,37,0	0/1:1,0:1:0:0,0,0	0/0:11,0:9:11.75:0,12,89	0/0:22,1:23:22.99:0,23,199	0/0:7,0:7:14.97:0,15,126	0/0:16,0:16:29.96:0,30,260	0/0:12,0:12:17.97:0,18,156	1/1:8,0:8:5.04:34,5,0	1/1:9,0:9:5.90:40,6,0	0/1:6,1:7:18.16:18,0,89	0/0:7,0:7:14.99:0,15,130	0/0:10,0:11:22.98:0,23,181	0/0:9,0:9:5.92:0,6,52	0/0:14,0:14:26.97:0,27,234	0/0:12,0:12:20.96:0,21,182	0/0:17,0:17:16.31:0,16,290	0/0:26,1:27:35.83:0,36,539	0/0:16,0:16:35.92:0,36,304	0/0:7,0:7:11.98:0,12,103	0/0:8,0:8:14.97:0,15,130	0/0:21,0:21:56.87:0,57,477	0/0:9,0:9:14.96:0,15,125	0/0:5,0:5:2.72:0,3,26	0/0:21,0:21:41.91:0,42,359	0/0:9,0:9:8.97:0,9,78	0/0:10,0:10:23.92:0,24,205	0/0:16,0:16:32.97:0,33,281	0/0:3,0:3:3:0,3,26
chr10	64447738	.	T	TACAC	5417.84	PASS	AB=0.738;AC=42;AF=0.808;AN=52;BaseQRankSum=-3.701;DP=676;FS=3.030;HRun=0;HaplotypeScore=110.2077;InbreedingCoeff=0.2439;MQ=58.77;MQ0=12;MQRankSum=-0.375;QD=9.66;ReadPosRankSum=0.322;VQSLOD=4.2346;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:45,0:45:36.86:460,37,0	1/1:5,8:13:6.96:145,7,0	./.	./.	0/0:27,0:27:28.88:0,29,384	0/1:4,14:18:27:270,0,27	1/1:18,7:25:8.62:153,9,0	1/1:22,0:21:8.98:74,9,0	0/1:13,0:25:32.74:33,0,41	1/1:21,0:20:19.72:390,20,0	1/1:7,11:18:12.04:285,12,0	1/1:8,14:23:14.76:296,15,0	0/1:21,0:22:1.39:1,0,406	1/1:18,9:26:9.50:214,10,0	1/1:11,14:26:18.04:366,18,0	0/1:13,26:41:20.24:521,0,20	1/1:15,12:28:11.08:168,11,0	1/1:8,1:12:15.25:183,15,0	1/1:14,0:14:9.09:124,9,0	1/1:12,7:20:3.01:71,3,0	1/1:14,22:38:6.02:142,6,0	1/1:9,9:19:11.19:164,11,0	0/1:18,0:19:9.54:10,0,215	0/0:31,0:33:44.68:0,45,586	0/1:8,10:18:26.14:406,0,26	1/1:14,11:25:29.10:408,29,0	1/1:8,13:23:14.76:250,15,0	1/1:5,8:13:12.04:285,12,0
chr10	64448583	.	CTGCATCAGGCATGCA	C	1330.97	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.654;DP=935;FS=32.658;HRun=0;HaplotypeScore=357.8286;InbreedingCoeff=0.9919;MQ=71.85;MQ0=0;MQRankSum=-4.834;QD=66.55;ReadPosRankSum=-0.583;VQSLOD=1.7166;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,108,5412	0/0:18,0:18:54.19:0,54,2790	0/0:27,0:25:72.21:0,72,2939	0/0:25,0:25:66.18:0,66,2838	0/0:30,0:30:90.29:0,90,4447	0/0:25,0:25:57.20:0,57,3212	0/0:60,0:60:99:0,172,8725	1/1:8,12:20:36.11:1426,36,0	0/0:34,0:34:99:0,99,5348	0/0:36,0:36:99:0,102,5039	0/0:23,0:23:66.23:0,66,3574	0/0:55,0:55:99:0,135,7003	0/0:40,0:40:99:0,105,5384	0/0:50,0:50:99:0,120,6483	0/0:65,0:65:99:0,160,8447	0/0:56,0:56:99:0,141,7614	0/0:20,0:20:54.19:0,54,2591	0/0:18,0:18:45.15:0,45,2312	0/0:23,0:23:57.17:0,57,2523	0/0:30,0:30:78.27:0,78,4005	0/0:67,0:67:99:0,199,10300	0/0:25,0:25:60.21:0,60,3103	0/0:22,0:22:60.21:0,60,3079	0/0:37,0:37:99:0,99,5004	0/0:17,0:17:48.15:0,48,2410	0/0:37,0:37:96.33:0,96,4980	0/0:28,0:28:81.28:0,81,4397	0/0:6,0:6:18.06:0,18,899
chr10	64449013	.	T	TA	1442.26	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.190;DP=690;FS=6.878;HRun=7;HaplotypeScore=79.1385;InbreedingCoeff=0.9898;MQ=67.19;MQ0=0;MQRankSum=0.877;QD=27.21;ReadPosRankSum=1.869;VQSLOD=4.3963;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,50:53:99:1537,132,0	0/0:18,0:18:44.99:0,45,415	0/0:19,1:19:33.03:0,33,310	0/0:16,0:14:17.71:0,18,157	0/0:30,0:30:53.93:0,54,496	0/0:21,0:21:54.08:0,54,521	0/0:22,0:22:51.03:0,51,480	0/0:29,0:29:75.07:0,75,709	0/0:23,0:23:51.07:0,51,492	0/0:28,0:28:60.08:0,60,579	0/0:18,0:18:41.78:0,42,354	0/0:25,0:25:62.99:0,63,579	0/0:24,0:24:60.09:0,60,579	0/0:21,0:21:54.09:0,54,521	0/0:26,0:26:72.06:0,72,685	0/0:23,0:23:60.08:0,60,575	0/0:28,0:28:78.09:0,78,741	0/0:15,0:15:42.03:0,42,397	0/0:28,0:28:75.08:0,75,711	0/0:28,0:28:71.92:0,72,657	0/0:32,0:31:75.09:0,75,719	0/0:26,0:26:66.09:0,66,630	0/0:17,0:17:26.89:0,27,237	0/0:18,0:18:51.08:0,51,492	0/0:19,0:19:32.98:0,33,301	0/0:29,0:29:72.10:0,72,695	0/0:33,0:33:87.12:0,87,834	0/0:19,0:19:54.08:0,54,519
chr10	64449305	.	G	GA	281.76	PASS	AB=0.938;AC=7;AF=0.125;AN=56;BaseQRankSum=-1.082;DP=420;FS=0.986;HRun=12;HaplotypeScore=91.2186;InbreedingCoeff=0.2486;MQ=66.08;MQ0=1;MQRankSum=-0.121;QD=3.24;ReadPosRankSum=-0.783;VQSLOD=0.4896;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,15:24:21:196,21,0	0/0:4,0:4:2.97:0,3,22	0/0:21,0:12:5.74:0,6,35	0/0:15,0:12:0.43:0,0,66	0/0:17,0:19:33.82:0,34,228	0/0:16,1:17:26.82:0,27,197	0/1:15,0:17:1.25:1,0,137	0/1:10,3:14:10.73:99,0,11	0/1:11,2:13:25.69:94,0,26	0/0:16,0:18:27.85:0,28,187	0/0:12,0:12:17.82:0,18,131	0/0:18,0:19:31.76:0,32,222	0/0:10,0:10:11.69:0,12,87	0/0:16,0:16:29.77:0,30,219	0/0:24,0:24:26.72:0,27,193	0/0:14,0:15:25.89:0,26,181	0/0:22,0:23:49.75:0,50,354	0/0:11,0:11:22.92:0,23,159	0/0:11,0:11:17.88:0,18,131	0/0:14,0:14:26.83:0,27,195	0/0:9,0:7:5.94:0,6,44	0/0:13,0:15:33.89:0,34,230	0/1:1,0:1:0:0,0,0	0/0:12,0:13:17.38:0,17,128	0/0:19,0:19:41.67:0,42,301	0/0:12,0:12:23.81:0,24,175	0/1:13,0:15:10.40:10,0,43	0/0:10,0:10:17.89:0,18,131
chr10	64449331	.	AT	A	6393.32	PASS	AC=52;AF=0.963;AN=54;BaseQRankSum=-2.210;DP=309;FS=0.000;HRun=4;HaplotypeScore=62.5160;InbreedingCoeff=0.4421;MQ=50.61;MQ0=3;MQRankSum=-1.228;QD=22.51;ReadPosRankSum=1.707;VQSLOD=3.8294;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,16:21:39.10:435,39,0	1/1:1,1:2:5.99:58,6,0	./.	0/0:9,1:4:3.41:0,3,19	1/1:6,10:16:36.01:391,36,0	1/1:3,10:13:35.96:384,36,0	1/1:5,9:12:33.10:376,33,0	1/1:2,8:9:24.07:276,24,0	1/1:2,3:4:12.02:130,12,0	1/1:4,11:15:39.11:455,39,0	1/1:1,5:6:18.04:196,18,0	1/1:5,4:8:18.05:199,18,0	1/1:5,5:7:14.92:143,15,0	1/1:3,7:10:24.05:260,24,0	1/1:3,9:12:32.99:356,33,0	1/1:8,7:14:30.06:321,30,0	1/1:4,14:17:29.95:327,30,0	1/1:5,8:11:21.04:232,21,0	1/1:6,3:8:12.02:132,12,0	1/1:2,7:9:12.03:137,12,0	1/1:2,4:4:9.01:94,9,0	1/1:0,6:6:18.05:206,18,0	1/1:1,1:2:3.01:36,3,0	1/1:5,7:12:11.64:142,12,0	1/1:6,11:17:39.08:430,39,0	1/1:3,12:13:39.10:441,39,0	1/1:3,5:8:15.04:167,15,0	1/1:7,2:9:6.02:71,6,0
chr10	64451042	.	C	CT	1496.54	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.824;DP=623;FS=5.222;HRun=1;HaplotypeScore=74.6486;InbreedingCoeff=0.9258;MQ=53.42;MQ0=20;MQRankSum=-7.465;QD=26.72;ReadPosRankSum=-2.042;VQSLOD=2.8326;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,17:24:36.10:523,36,0	0/0:7,0:7:18.02:0,18,230	0/0:14,0:10:27.09:0,27,377	0/0:18,0:16:39.12:0,39,513	0/0:30,0:29:72.24:0,72,1006	0/0:23,0:22:57.05:0,57,730	0/0:27,0:26:66.20:0,66,902	1/1:3,11:12:33.11:526,33,0	1/1:5,10:15:39.13:589,39,0	0/0:34,0:34:99:0,99,1368	0/0:22,0:22:54.18:0,54,754	0/0:25,0:25:66.02:0,66,875	0/0:29,0:29:69.12:0,69,961	0/0:21,0:21:57.08:0,57,719	0/0:23,0:22:66.18:0,66,901	0/0:36,0:36:99:0,102,1376	0/0:26,2:24:6.48:0,6,790	0/0:22,1:20:6.43:0,6,665	0/0:20,0:17:48.16:0,48,671	0/0:21,0:21:63.21:0,63,880	0/0:44,0:42:99:0,108,1507	0/0:15,0:15:45.10:0,45,593	0/0:9,0:9:24.08:0,24,334	0/0:22,1:22:60.19:0,60,821	0/0:14,0:13:39.13:0,39,545	0/0:28,0:27:78.26:0,78,1086	0/0:26,0:26:75.22:0,75,1022	0/0:7,0:6:15.04:0,15,193
chr10	64451049	.	CA	C	1792.03	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=10.061;DP=631;FS=2.594;HRun=1;HaplotypeScore=74.0212;InbreedingCoeff=0.9880;MQ=56.63;MQ0=1;MQRankSum=-5.931;QD=29.87;ReadPosRankSum=-3.466;VQSLOD=2.5326;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,21:26:54.11:703,54,0	0/0:6,0:6:15.05:0,15,239	0/0:19,0:16:45.06:0,45,623	0/0:20,0:19:44.24:0,44,702	0/0:34,0:34:90.29:0,90,1412	0/0:20,0:20:57.15:0,57,873	0/0:27,0:27:72.18:0,72,1096	1/1:0,17:17:51.08:624,51,0	1/1:5,12:17:45.15:607,45,0	0/0:33,0:33:96.33:0,96,1530	0/0:23,0:23:63.18:0,63,955	0/0:23,0:23:63.20:0,63,980	0/0:29,0:29:81.19:0,81,1225	0/0:20,0:20:54.18:0,54,861	0/0:23,0:23:69.14:0,69,1048	0/0:38,0:38:99:0,111,1702	0/0:24,1:23:24.52:0,25,875	0/0:23,0:21:52.42:0,52,809	0/0:18,0:18:48.15:0,48,728	0/0:24,0:24:72.25:0,72,1146	0/0:41,0:41:99:0,114,1819	0/0:15,0:15:45.15:0,45,716	0/0:11,0:11:33.09:0,33,481	0/0:20,1:21:60.20:0,60,956	0/0:14,0:13:42.12:0,42,625	0/0:27,0:26:69.23:0,69,1103	0/0:31,0:31:84.26:0,84,1290	0/0:6,0:6:15.05:0,15,240
chr10	64454749	.	G	GAC	5304.61	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-13.882;DP=745;FS=0.806;HRun=0;HaplotypeScore=82.5060;InbreedingCoeff=0.9999;MQ=83.95;MQ0=0;MQRankSum=-0.993;QD=44.95;ReadPosRankSum=-2.686;VQSLOD=5.4555;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,54:59:99:2682,154,0	0/0:13,0:13:36.12:0,36,487	0/0:23,0:23:63.21:0,63,853	0/0:21,0:21:39.17:0,39,635	0/0:30,0:30:78.26:0,78,1055	0/0:23,0:22:66.22:0,66,892	0/0:24,0:24:57.19:0,57,771	1/1:4,35:40:99:1833,108,0	1/1:3,16:19:45.15:789,45,0	0/0:25,0:25:63.18:0,63,834	0/0:18,0:18:48.16:0,48,649	0/0:27,0:27:78.26:0,78,1055	0/0:25,0:25:72.24:0,72,973	0/0:29,0:29:81.26:0,81,1079	0/0:36,0:36:99:0,102,1364	0/0:23,0:23:69.23:0,69,934	0/0:32,0:32:90.28:0,90,1200	0/0:24,0:24:66.22:0,66,892	0/0:21,0:21:48.10:0,48,573	0/0:31,0:31:93.29:0,93,1240	0/0:29,0:29:87.29:0,87,1177	0/0:22,0:22:60.18:0,60,795	0/0:19,0:19:54.17:0,54,713	0/0:25,0:25:69.17:0,69,896	0/0:30,0:30:81.27:0,81,1095	0/0:23,0:23:60.20:0,60,812	0/0:39,0:38:99:0,108,1454	0/0:15,0:15:45.15:0,45,608
chr10	64457219	.	TC	T	576.53	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.504;DP=571;FS=2.142;HRun=1;HaplotypeScore=53.8657;InbreedingCoeff=0.9195;MQ=77.38;MQ0=0;MQRankSum=-1.838;QD=30.34;ReadPosRankSum=1.621;VQSLOD=3.4351;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,126,1943	0/0:6,0:6:15.05:0,15,240	0/0:19,0:19:57.17:0,57,824	0/0:10,0:10:26.94:0,27,362	0/0:13,0:13:36.12:0,36,575	0/0:22,0:22:63.21:0,63,1007	0/0:35,0:35:99:0,105,1668	0/0:22,0:22:66.18:0,66,1014	1/1:0,19:19:48.16:671,48,0	0/0:20,0:20:60.20:0,60,938	0/0:4,0:4:12.04:0,12,185	0/0:37,0:37:99:0,111,1727	0/0:22,0:22:63.21:0,63,999	0/0:26,0:26:78.25:0,78,1216	0/0:18,0:18:54.18:0,54,860	0/0:17,0:17:51.17:0,51,813	0/0:59,0:59:99:0,172,2694	0/0:30,0:30:90.25:0,90,1388	0/0:19,0:19:57.19:0,57,893	0/0:4,0:4:12.04:0,12,185	0/0:37,0:37:99:0,111,1767	0/0:10,0:10:30.10:0,30,473	0/0:8,0:8:21.07:0,21,336	0/0:15,0:15:45.15:0,45,719	0/0:11,0:11:30.10:0,30,480	0/0:18,0:18:51.17:0,51,794	0/0:21,0:21:63.21:0,63,1000	0/0:7,0:7:21.07:0,21,336
chr10	64459896	.	TAC	T	225.99	PASS	AB=0.958;AC=15;AF=0.278;AN=54;BaseQRankSum=5.020;DP=395;FS=1.382;HRun=0;HaplotypeScore=47.9517;InbreedingCoeff=-0.2828;MQ=47.45;MQ0=34;MQRankSum=-1.637;QD=0.77;ReadPosRankSum=0.966;VQSLOD=1.4464;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:4,0:2:0:0,0,0	0/1:4,0:4:6.03:6,0,63	0/1:80,5:17:16.42:16,0,216	0/1:67,1:14:38.35:38,0,61	0/1:18,0:18:10.21:10,0,241	0/0:8,0:8:8.98:0,9,97	0/1:2,0:2:16:16,0,31	0/0:7,0:4:2.27:0,2,10	0/0:4,0:1:2.84:0,3,14	0/0:7,2:8:3.12:0,3,193	0/1:11,0:12:19.32:19,0,230	0/0:9,0:9:2.05:0,2,128	0/0:6,0:5:9.97:0,10,86	0/0:4,0:3:3.01:0,3,45	0/1:8,0:9:12.10:12,0,167	0/0:6,1:7:17.43:0,17,178	0/1:25,1:26:37.69:38,0,435	0/0:13,0:12:0.42:0,0,195	0/1:13,3:14:94.69:95,0,227	0/0:10,0:10:25.66:0,26,276	1/1:5,0:4:3.06:8,3,0	0/0:1,0:1:3.01:0,3,45	0/0:4,0:3:8.98:0,9,108	./.	0/1:11,1:11:48.20:48,0,166	0/0:16,1:16:32.25:0,32,394	0/1:15,0:14:7.14:7,0,158	0/1:15,0:12:46.51:47,0,242
chr10	64460757	.	C	CA	1074.40	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-7.521;DP=802;FS=6.372;HRun=1;HaplotypeScore=73.6199;InbreedingCoeff=0.9980;MQ=85.47;MQ0=1;MQRankSum=-1.654;QD=37.05;ReadPosRankSum=-0.507;VQSLOD=3.6258;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,147,1886	0/0:17,0:17:48.16:0,48,623	0/0:28,0:28:69.19:0,69,863	0/0:27,0:27:69.07:0,69,843	0/0:23,0:23:63.19:0,63,803	0/0:25,0:25:75.23:0,75,959	0/0:25,0:25:75.24:0,75,974	0/0:34,0:34:93.29:0,93,1192	1/1:1,28:28:78.26:1169,78,0	0/0:38,0:38:99:0,111,1440	0/0:22,0:22:60.18:0,60,766	0/0:34,0:34:99:0,99,1284	0/0:28,0:28:78.22:0,78,981	0/0:35,0:35:99:0,105,1343	0/0:36,0:36:99:0,105,1363	0/0:45,0:45:99:0,129,1675	0/0:23,0:23:69.22:0,69,896	0/0:28,0:28:84.24:0,84,1072	0/0:17,0:17:51.16:0,51,649	0/0:33,0:33:99:0,99,1283	0/0:18,0:17:51.17:0,51,662	0/0:41,0:41:99:0,117,1503	0/0:16,0:16:45.15:0,45,584	0/0:40,0:40:99:0,120,1543	0/0:25,0:25:69.22:0,69,895	0/0:32,0:32:84.26:0,84,1078	0/0:26,0:26:78.25:0,78,1012	0/0:8,0:8:24.08:0,24,310
chr10	64464259	.	A	AG	3933.53	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-12.227;DP=582;FS=3.032;HRun=2;HaplotypeScore=55.8796;InbreedingCoeff=0.9958;MQ=66.34;MQ0=1;MQRankSum=-1.089;QD=40.14;ReadPosRankSum=-0.702;VQSLOD=3.7774;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,40:46:99:1856,132,0	0/0:8,0:8:24.08:0,24,297	0/0:20,0:20:57.18:0,57,703	0/0:30,0:28:66.17:0,66,811	0/0:12,0:12:36.11:0,36,446	0/0:20,0:20:48.15:0,48,595	0/0:12,0:12:30.09:0,30,372	1/1:1,33:34:99:1387,99,0	1/1:1,17:18:48.16:690,48,0	0/0:23,0:23:69.22:0,69,856	0/0:11,0:11:33.10:0,33,409	0/0:24,0:24:72.20:0,72,877	0/0:14,0:14:42.13:0,42,521	0/0:22,0:22:66.21:0,66,817	0/0:24,0:24:72.21:0,72,879	0/0:36,0:36:99:0,108,1327	0/0:36,0:36:99:0,105,1298	0/0:20,0:20:57.18:0,57,706	0/0:20,0:20:57.17:0,57,695	0/0:14,0:14:42.13:0,42,521	0/0:27,0:27:78.23:0,78,954	0/0:12,0:12:30.09:0,30,372	0/0:12,0:12:36.10:0,36,433	0/0:17,0:17:51.16:0,51,631	0/0:14,0:14:39.12:0,39,484	0/0:26,0:26:72.22:0,72,882	0/0:23,0:23:66.19:0,66,804	0/0:7,0:7:18.06:0,18,223
chr10	64466428	.	G	GAA	1233.62	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-6.989;DP=649;FS=6.259;HRun=3;HaplotypeScore=80.0530;InbreedingCoeff=0.9962;MQ=76.59;MQ0=0;MQRankSum=-0.233;QD=39.79;ReadPosRankSum=-4.768;VQSLOD=2.0804;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,105,1451	0/0:8,0:8:24.07:0,24,320	0/0:22,0:21:52.52:0,53,579	0/0:14,0:14:33.03:0,33,390	0/0:19,0:19:57.17:0,57,777	0/0:14,0:14:36.12:0,36,503	0/0:37,0:37:99:0,108,1491	1/1:2,29:31:81.67:1328,82,0	0/0:25,0:25:75.24:0,75,1031	0/0:19,0:19:54.17:0,54,728	0/0:11,0:11:33.10:0,33,444	0/0:25,0:25:72.23:0,72,990	0/0:36,0:36:99:0,99,1312	0/0:26,0:26:72.23:0,72,989	0/0:33,0:33:99:0,99,1349	0/0:33,0:33:93.28:0,93,1265	0/0:25,0:25:69.23:0,69,964	0/0:17,0:17:48.13:0,48,637	0/0:18,0:18:54.18:0,54,755	0/0:18,0:18:51.15:0,51,693	0/0:41,0:41:99:0,114,1557	0/0:21,0:21:60.12:0,60,798	0/0:12,0:12:36.12:0,36,503	0/0:26,0:26:66.22:0,66,921	0/0:15,0:14:45.14:0,45,612	0/0:25,0:25:72.22:0,72,963	0/0:33,0:33:96.32:0,96,1341	0/0:9,0:9:27.01:0,27,288
chr10	64469988	.	TAC	T	594.65	PASS	AB=0.921;AC=17;AF=0.315;AN=54;BaseQRankSum=1.622;DP=632;FS=28.403;HRun=0;HaplotypeScore=143.7431;InbreedingCoeff=-0.0490;MQ=47.99;MQ0=6;MQRankSum=0.761;QD=1.69;ReadPosRankSum=4.406;VQSLOD=0.7026;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:36,1:36:13.53:14,0,93	0/0:7,0:7:3.31:0,3,15	./.	0/0:26,0:11:0.47:0,0,1	1/1:6,0:17:20.81:101,21,0	1/1:22,0:24:8.52:42,9,0	1/1:19,2:22:8.98:85,9,0	0/0:38,0:36:8.74:0,9,50	0/0:17,0:15:2.29:0,2,23	0/1:32,4:33:86.31:86,0,170	0/1:17,4:21:88.20:88,0,94	0/1:17,2:19:46.91:47,0,57	0/1:17,1:18:9.95:10,0,217	0/0:14,0:15:10.96:0,11,49	0/1:26,2:27:3.30:42,0,3	0/0:21,0:20:3.01:0,3,40	0/1:31,2:33:57.67:90,0,58	0/1:20,2:22:40.71:41,0,96	0/0:20,0:20:11.39:0,11,77	0/0:13,0:13:8.04:0,8,35	0/0:21,0:21:3:0,3,25	0/0:13,0:12:3:0,3,26	0/1:16,1:17:11.76:12,0,222	0/1:24,3:27:58.21:58,0,198	0/1:26,2:27:35.64:36,0,157	0/0:30,0:30:24.37:0,24,237	0/0:20,0:20:20.66:0,21,172	0/0:18,0:18:11.68:0,12,126
chr10	64470028	.	C	CAT	2469.33	PASS	AB=0.992;AC=29;AF=0.518;AN=56;BaseQRankSum=5.307;DP=517;FS=23.431;HRun=0;HaplotypeScore=133.8052;InbreedingCoeff=-0.1006;MQ=48.52;MQ0=18;MQRankSum=-1.041;QD=6.08;ReadPosRankSum=2.010;VQSLOD=1.8168;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:26:18.32:18,0,114	1/1:3,0:3:3:28,3,0	0/0:25,0:6:17.78:0,18,126	0/1:18,0:6:5.10:5,0,27	0/0:17,0:17:34.62:0,35,294	1/1:14,0:10:12.67:77,13,0	0/1:12,0:12:11.89:47,0,12	0/1:26,0:19:18.68:228,0,19	0/0:14,0:12:6.41:0,6,43	0/1:33,0:30:80.85:344,0,81	0/1:18,0:18:24.72:96,0,25	0/1:15,0:15:23.56:68,0,24	0/0:15,0:15:38.94:0,39,445	1/1:14,0:14:11.97:108,12,0	0/1:20,0:19:10.27:109,0,10	1/1:13,0:13:8.91:68,9,0	0/1:27,0:26:46.70:47,0,88	0/1:20,0:18:77.96:78,0,158	1/1:18,0:17:34.86:271,35,0	0/1:22,1:23:16.76:66,0,17	0/1:9,0:9:32.42:40,0,32	1/1:13,0:12:10.32:43,10,0	0/0:18,0:18:38.76:0,39,418	0/0:22,0:22:30.91:0,31,454	0/1:26,0:25:29.56:187,0,30	0/1:25,0:25:26.73:235,0,27	0/1:12,1:13:95.56:96,0,100	1/1:17,2:19:41.09:391,41,0
chr10	64470030	.	C	CATAT	7350.25	PASS	AB=0.872;AC=36;AF=0.643;AN=56;BaseQRankSum=-1.581;DP=532;FS=32.595;HRun=0;HaplotypeScore=154.9324;InbreedingCoeff=0.4323;MQ=49.10;MQ0=16;MQRankSum=-0.402;QD=18.10;ReadPosRankSum=0.526;VQSLOD=2.9747;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:21,0:22:5.42:140,0,5	1/1:0,0:3:3.01:75,3,0	0/0:24,0:6:18.06:0,18,255	0/0:18,0:6:1.95:0,2,63	0/0:18,0:18:44.18:0,44,570	1/1:13,0:10:15.69:155,16,0	0/1:11,0:11:11.17:69,0,11	1/1:27,0:20:42.14:570,42,0	0/0:14,0:12:9.01:0,9,107	1/1:34,0:31:14.23:820,14,0	0/1:18,0:19:17.59:263,0,18	0/1:10,0:19:11.70:190,0,12	0/0:14,0:14:36.10:0,36,562	1/1:4,0:19:12.04:255,12,0	1/1:19,0:19:11.39:400,11,0	1/1:18,0:18:8.74:159,9,0	0/1:15,0:27:18.43:170,0,18	0/1:21,0:19:6.78:481,0,7	1/1:3,15:20:54.16:796,54,0	1/1:9,16:26:5.97:94,6,0	1/1:8,0:8:5.90:98,6,0	1/1:5,0:12:10.71:95,11,0	0/0:17,0:17:32.67:0,33,439	0/0:21,0:21:30.89:0,31,549	1/1:18,0:23:5.81:681,6,0	1/1:7,19:26:50.60:813,51,0	1/1:10,7:17:11.98:257,12,0	1/1:14,3:17:42.14:769,42,0
chr10	64470044	.	TA	T	85.10	PASS	AB=0.877;AC=6;AF=0.107;AN=56;BaseQRankSum=1.155;DP=529;FS=0.783;HRun=15;HaplotypeScore=110.7713;InbreedingCoeff=0.1148;MQ=62.27;MQ0=5;MQRankSum=0.720;QD=0.87;ReadPosRankSum=0.635;VQSLOD=-0.1621;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:16,5:21:19.41:120,19,0	0/0:3,1:4:5.97:0,6,46	0/0:26,1:12:9.43:0,9,72	0/0:25,0:12:0.24:0,0,51	0/0:22,0:22:28.20:0,28,228	0/0:16,0:15:12:0,12,106	0/0:9,0:9:12:0,12,106	0/0:29,0:26:24.28:0,24,207	0/0:10,0:13:27.14:0,27,210	0/1:19,3:20:33.31:33,0,102	0/0:14,0:18:23.50:0,23,167	0/0:22,0:22:15.23:0,15,112	0/0:18,1:20:7.46:0,7,182	0/1:21,3:24:20.06:20,0,85	0/0:18,0:18:40.80:0,41,343	0/0:15,0:15:11.94:0,12,95	0/0:24,0:24:2.79:0,3,119	0/0:19,0:19:24:0,24,211	0/0:18,1:19:7.70:0,8,185	0/0:18,2:21:3.17:0,3,241	0/1:5,2:7:22.29:22,0,66	0/0:7,0:7:10.96:0,11,71	0/1:23,1:24:15.48:15,0,39	0/0:19,0:19:26.92:0,27,222	0/0:20,0:20:16.71:0,17,256	0/0:19,1:20:10.69:0,11,208	0/0:18,2:21:15.66:0,16,228	0/0:19,0:20:36.74:0,37,300
chr10	64471264	.	CG	C	8463.15	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=7.123;DP=341;FS=2.853;HRun=2;HaplotypeScore=36.0785;InbreedingCoeff=0.8406;MQ=71.81;MQ0=0;MQRankSum=-1.879;QD=33.99;ReadPosRankSum=0.813;VQSLOD=4.4469;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:81.27:0,81,1210	1/1:0,2:2:6.01:66,6,0	0/0:4,0:4:8.99:0,9,96	0/0:6,0:6:11.93:0,12,137	0/0:1,0:1:3.01:0,3,45	1/1:0,3:3:6.02:78,6,0	1/1:1,39:40:99:1285,99,0	0/0:6,0:6:15.04:0,15,206	0/0:6,0:6:18.06:0,18,269	1/1:1,3:4:9.03:117,9,0	1/1:0,5:5:12.04:156,12,0	1/1:1,14:15:36.12:467,36,0	0/0:7,0:7:21.07:0,21,314	1/1:0,10:10:30.10:389,30,0	1/1:0,4:4:12.04:156,12,0	1/1:0,9:9:27.09:350,27,0	1/1:1,23:24:69.22:895,69,0	1/1:1,20:21:60.19:776,60,0	1/1:0,6:6:14.41:163,14,0	1/1:0,1:1:3.01:39,3,0	1/1:1,74:75:99:2401,187,0	1/1:0,3:3:6.02:78,6,0	0/0:7,0:7:21.07:0,21,313	0/0:27,0:27:78.24:0,78,1129	1/1:0,3:3:9.03:117,9,0	1/1:1,12:13:39.13:501,39,0	1/1:0,8:8:24.08:312,24,0	1/1:0,3:3:9.03:117,9,0
chr10	64471531	.	T	TC	547.34	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-1.775;DP=511;FS=6.212;HRun=7;HaplotypeScore=89.2822;InbreedingCoeff=0.7859;MQ=76.04;MQ0=0;MQRankSum=-1.929;QD=21.05;ReadPosRankSum=-0.632;VQSLOD=2.6437;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:9,17:26:57.51:642,58,0	0/0:5,0:5:9.01:0,9,87	0/0:14,0:14:27:0,27,251	0/0:14,0:14:25.57:0,26,225	0/0:6,0:6:15.02:0,15,144	0/0:17,0:17:42.06:0,42,404	0/0:31,0:31:72.05:0,72,683	0/0:21,0:21:42.02:0,42,396	0/0:33,0:33:75.10:0,75,719	0/0:12,0:12:33.04:0,33,312	0/0:8,0:8:21.03:0,21,202	0/0:32,0:32:87.09:0,87,827	0/0:16,0:16:45.06:0,45,428	0/0:28,0:28:72.11:0,72,696	0/0:16,0:16:45.07:0,45,434	0/0:12,0:12:33.05:0,33,319	0/0:38,0:38:99:0,99,950	0/0:27,0:28:69.04:0,69,650	0/0:18,0:18:44.91:0,45,419	0/0:6,0:6:9.01:0,9,87	0/0:33,0:33:81.11:0,81,776	0/0:4,0:4:6.01:0,6,57	0/0:6,0:6:15.02:0,15,145	0/0:32,0:32:87.14:0,87,840	0/0:17,0:17:44.03:0,44,396	0/0:15,0:15:38.79:0,39,356	0/0:17,0:17:45.06:0,45,428	0/0:6,0:6:18.03:0,18,174
chr10	64471587	.	A	AG	10140.61	PASS	AB=1.000;AC=39;AF=0.696;AN=56;BaseQRankSum=-5.171;DP=488;FS=8.872;HRun=3;HaplotypeScore=110.9096;InbreedingCoeff=0.8392;MQ=71.26;MQ0=0;MQRankSum=-3.651;QD=29.56;ReadPosRankSum=1.688;VQSLOD=3.6209;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:15.12:0,15,159	1/1:0,3:3:6.02:69,6,0	0/0:12,0:12:14.86:0,15,103	0/1:14,0:13:10.77:11,0,149	0/0:3,0:3:4.72:0,5,16	1/1:5,12:17:45.05:500,45,0	1/1:4,28:32:80.43:922,80,0	0/0:21,0:21:52.03:0,52,273	0/0:24,0:24:34.87:0,35,122	1/1:0,13:15:45.03:538,45,0	1/1:0,6:6:12.04:146,12,0	1/1:4,26:30:81.19:974,81,0	0/0:21,0:21:27.88:0,28,116	1/1:7,22:29:76.92:863,77,0	1/1:0,18:18:54.10:647,54,0	1/1:5,12:17:45.03:515,45,0	1/1:2,27:29:60.16:747,60,0	1/1:2,18:20:51.14:635,51,0	1/1:3,16:19:51.13:608,51,0	1/1:1,3:4:9:99,9,0	1/1:3,27:30:87.12:1020,87,0	1/1:1,5:6:15.04:173,15,0	0/0:8,0:8:4.73:0,5,51	0/0:26,0:26:52.88:0,53,194	1/1:3,12:15:42.10:484,42,0	1/1:3,8:12:29.98:332,30,0	1/1:0,19:19:51.09:598,51,0	1/1:1,7:8:21.07:262,21,0
chr10	64477886	.	T	TC	1135.05	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=0.021;DP=715;FS=4.001;HRun=7;HaplotypeScore=122.3828;InbreedingCoeff=0.9920;MQ=86.19;MQ0=0;MQRankSum=-4.075;QD=26.40;ReadPosRankSum=0.885;VQSLOD=2.6535;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,40:43:99:1230,105,0	0/0:9,0:9:24.02:0,24,225	0/0:23,0:23:23.08:0,23,315	0/0:33,0:33:60.94:0,61,465	0/0:37,0:37:69.01:0,69,940	0/0:31,0:31:81.10:0,81,775	0/0:39,0:39:93.12:0,93,887	0/0:35,0:35:69.06:0,69,649	0/0:27,0:27:75.09:0,75,713	0/0:18,0:18:45.06:0,45,429	0/0:9,0:9:27.04:0,27,260	0/0:33,0:33:81.11:0,81,776	0/0:25,0:25:66.04:0,66,614	0/0:20,0:21:62.04:0,62,568	0/0:17,0:17:48.06:0,48,457	0/0:30,0:30:84.13:0,84,811	0/0:24,0:24:66.08:0,66,629	0/0:15,0:15:36.05:0,36,347	0/0:16,0:16:45.06:0,45,430	0/0:19,0:19:51.06:0,51,485	0/0:30,0:30:78.08:0,78,748	0/0:40,0:40:99:0,111,1055	0/0:26,0:26:71.85:0,72,678	0/0:27,0:27:81.11:0,81,771	0/0:19,0:19:48.06:0,48,460	0/0:30,0:30:75.08:0,75,713	0/0:31,0:31:78.08:0,78,742	0/0:8,0:8:23.53:0,24,212
chr10	64478865	.	CCT	C	787.74	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.885;DP=739;FS=5.954;HRun=0;HaplotypeScore=85.6638;InbreedingCoeff=0.9993;MQ=85.69;MQ0=0;MQRankSum=0.102;QD=35.81;ReadPosRankSum=-0.063;VQSLOD=5.3223;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:58:99:0,169,3086	0/0:15,0:15:45.14:0,45,811	0/0:24,0:24:64.54:0,65,1191	0/0:27,0:27:75.21:0,75,1322	1/1:1,21:22:60.20:883,60,0	0/0:16,0:16:48.16:0,48,899	0/0:24,0:24:69.22:0,69,1261	0/0:26,0:25:75.24:0,75,1334	0/0:36,0:36:99:0,108,2014	0/0:27,0:27:78.25:0,78,1405	0/0:16,0:16:39.13:0,39,706	0/0:26,0:26:75.24:0,75,1366	0/0:27,0:27:78.27:0,78,1460	0/0:27,0:27:81.26:0,81,1484	0/0:37,0:37:99:0,111,2078	0/0:34,0:34:99:0,99,1843	0/0:22,0:22:66.19:0,66,1201	0/0:32,0:32:90.31:0,90,1655	0/0:16,0:16:48.12:0,48,863	0/0:25,0:25:72.25:0,72,1337	0/0:46,0:46:99:0,129,2370	0/0:11,0:11:30.10:0,30,553	0/0:20,0:20:54.19:0,54,998	0/0:24,0:24:69.22:0,69,1260	0/0:29,0:29:87.30:0,87,1602	0/0:39,0:39:99:0,117,2152	0/0:21,0:21:63.20:0,63,1128	0/0:12,0:12:36.12:0,36,674
chr10	64479196	.	T	TA	436.13	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-6.473;DP=619;FS=3.267;HRun=9;HaplotypeScore=62.9377;InbreedingCoeff=0.9822;MQ=74.17;MQ0=0;MQRankSum=-0.104;QD=18.96;ReadPosRankSum=1.029;VQSLOD=4.0452;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,19:23:48.13:531,48,0	0/0:15,0:15:26.99:0,27,234	0/0:14,0:14:26.97:0,27,230	0/0:13,0:13:26.12:0,26,204	0/0:20,0:20:53.99:0,54,468	0/0:22,0:22:50.98:0,51,442	0/0:20,0:20:53.94:0,54,462	0/0:32,0:32:71.93:0,72,614	0/0:19,0:19:50.99:0,51,443	0/0:36,0:36:92.56:0,93,787	0/0:24,0:24:59.98:0,60,521	0/0:23,0:23:65.97:0,66,570	0/0:19,1:20:17.81:0,18,384	0/0:18,0:18:47.95:0,48,410	0/0:30,0:30:68.96:0,69,599	0/0:19,0:19:56.96:0,57,487	0/0:36,0:36:95.51:0,96,823	0/0:20,0:20:53.96:0,54,462	0/0:26,0:26:65.95:0,66,567	0/0:26,1:27:26.64:0,27,449	0/0:7,0:7:21:0,21,182	0/0:21,0:21:53.98:0,54,469	0/0:25,0:25:68.98:0,69,599	0/0:18,0:18:47.97:0,48,414	0/0:29,0:29:71.77:0,72,614	0/0:25,0:25:56.97:0,57,495	0/0:28,0:27:71.98:0,72,625	0/0:9,0:9:26.99:0,27,234
chr10	64490534	.	ATCTC	A	576.48	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=0.049;DP=482;FS=29.852;HRun=0;HaplotypeScore=112.4609;InbreedingCoeff=0.3600;MQ=67.59;MQ0=19;MQRankSum=1.452;QD=27.45;ReadPosRankSum=-1.138;VQSLOD=1.5879;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:21:10.43:0,10,57	0/0:3,0:3:8.98:0,9,102	0/0:47,0:25:56.59:0,57,916	0/0:46,0:28:59.94:0,60,1016	0/0:20,0:20:30.09:0,30,470	0/0:10,0:9:5.16:0,5,25	0/0:14,0:13:5.74:0,6,53	1/1:2,15:17:45.15:669,45,0	0/0:15,0:14:15.05:0,15,243	0/0:18,0:18:23.40:0,23,283	0/0:6,0:6:6.85:0,7,47	0/0:16,0:15:8.97:0,9,131	0/0:19,0:19:45.15:0,45,805	0/0:14,0:14:3.94:0,4,27	0/0:16,0:16:9.03:0,9,126	0/0:8,0:8:11.53:0,12,198	0/0:19,0:18:1.32:0,1,94	0/0:18,0:17:7.64:0,8,107	0/0:4,0:16:2.49:0,2,117	0/0:9,0:9:13.42:0,13,129	0/0:35,0:34:20.39:0,20,215	0/0:9,0:9:3.01:0,3,44	0/0:14,0:14:15.05:0,15,294	0/0:19,0:19:48.16:0,48,900	0/0:13,0:13:3.08:0,3,56	0/0:20,0:20:19.60:0,20,196	0/0:12,0:12:7.85:0,8,105	1/1:4,0:4:0.32:1,0,0
chr10	64490583	.	T	TGA	3011.95	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=1.370;DP=428;FS=3.252;HRun=0;HaplotypeScore=88.9313;InbreedingCoeff=0.7942;MQ=56.67;MQ0=15;MQRankSum=-1.507;QD=10.64;ReadPosRankSum=0.316;VQSLOD=3.4635;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:21:14.68:101,15,0	1/1:2,0:2:2.97:20,3,0	0/0:30,0:19:44.24:0,44,514	0/0:25,0:13:35.32:0,35,395	0/0:13,0:13:11.90:0,12,100	1/1:4,9:13:3.01:54,3,0	1/1:2,0:16:2.92:39,3,0	0/0:15,0:15:22.45:0,22,234	0/0:22,0:21:35.95:0,36,297	1/1:17,0:17:10.17:222,10,0	1/1:3,0:3:2.96:19,3,0	1/1:14,0:13:29.65:222,30,0	0/0:10,0:10:21.04:0,21,245	1/1:9,0:9:14.63:124,15,0	1/1:14,0:14:30.44:252,30,0	1/1:13,0:13:23.73:189,24,0	1/1:4,1:21:6.02:77,6,0	1/1:20,0:17:39.39:382,39,0	1/1:7,0:7:17.89:169,18,0	1/1:5,7:13:3.01:54,3,0	1/1:41,0:40:53.27:483,53,0	1/1:10,0:10:8.77:63,9,0	0/0:10,0:10:6.02:0,6,86	0/0:20,0:20:53.80:0,54,481	1/1:12,0:12:20.85:173,21,0	1/1:2,9:12:26.13:227,26,0	1/1:15,0:15:34.55:265,35,0	1/1:5,0:5:11.74:78,12,0
chr10	64491664	.	A	AATGGATAGTCATGTGACATATACAAGC	3079.33	PASS	AB=0.736;AC=32;AF=0.941;AN=34;BaseQRankSum=-2.904;DP=57;FS=5.244;HRun=0;HaplotypeScore=46.0382;InbreedingCoeff=-0.2179;MQ=150.12;MQ0=0;MQRankSum=-2.699;QD=57.02;ReadPosRankSum=-0.818;VQSLOD=1.2403;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,0:3:3.01:74,3,0	./.	0/1:8,1:13:32.62:1331,0,33	0/1:4,0:6:67.02:739,0,67	1/1:2,0:2:2.97:20,3,0	1/1:1,0:1:3.01:73,3,0	1/1:1,0:1:3:25,3,0	1/1:1,0:1:3:25,3,0	1/1:2,0:2:3.01:49,3,0	1/1:2,0:2:6.02:160,6,0	./.	./.	1/1:1,0:1:2.97:20,3,0	./.	1/1:1,0:1:2.97:20,3,0	1/1:4,0:5:8.94:115,9,0	./.	./.	./.	1/1:2,0:2:3:25,3,0	./.	1/1:5,0:5:3:26,3,0	./.	./.	1/1:4,0:4:8.97:122,9,0	1/1:3,0:4:6.49:206,6,0	./.	1/1:0,0:1:3.01:140,3,0
chr10	64494885	.	G	GAA	921.10	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.311;DP=560;FS=2.703;HRun=8;HaplotypeScore=81.8597;InbreedingCoeff=0.9298;MQ=59.52;MQ0=4;MQRankSum=0.848;QD=26.32;ReadPosRankSum=1.790;VQSLOD=3.4719;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,28:35:68.68:1016,69,0	0/0:7,0:7:18.05:0,18,201	0/0:14,0:12:32.71:0,33,321	0/0:9,0:6:8.79:0,9,127	0/0:15,0:14:30.06:0,30,334	0/0:15,0:15:42.10:0,42,468	0/0:22,0:22:51.08:0,51,540	0/0:30,0:29:78.19:0,78,862	0/0:16,0:15:39.07:0,39,426	0/0:26,0:25:69.17:0,69,762	0/0:13,0:13:33:0,33,351	0/0:18,0:18:45.06:0,45,501	0/0:18,0:18:51.12:0,51,559	0/0:12,0:12:36.10:0,36,401	0/0:23,0:22:66.15:0,66,725	0/0:20,0:20:60.16:0,60,668	0/0:38,0:38:96.20:0,96,1048	0/0:29,0:29:69.15:0,69,760	0/0:29,0:28:78.21:0,78,869	0/0:27,0:27:75.20:0,75,835	0/0:14,0:14:33.08:0,33,368	0/0:9,0:8:21.04:0,21,225	0/0:20,0:20:57.14:0,57,626	0/0:21,0:21:54.12:0,54,592	0/0:17,0:17:48.12:0,48,535	0/0:24,0:24:66.18:0,66,735	0/0:29,0:28:77.94:0,78,847	0/0:9,0:9:27.07:0,27,300
chr10	64495572	.	CCCCT	C	580.28	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-2.085;DP=576;FS=3.471;HRun=0;HaplotypeScore=135.3876;InbreedingCoeff=0.9397;MQ=68.33;MQ0=0;MQRankSum=0.436;QD=32.24;ReadPosRankSum=-0.816;VQSLOD=3.4090;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,13:18:41.17:675,41,0	0/0:8,0:8:21.06:0,21,442	0/0:27,0:18:48.28:0,48,867	0/0:28,0:22:28.62:0,29,652	0/0:12,0:12:26.98:0,27,456	0/0:27,0:27:81.05:0,81,1891	0/0:29,0:29:84.15:0,84,1805	0/0:32,0:32:93.20:0,93,1959	0/0:4,0:4:9.36:0,9,126	0/0:18,0:18:54.12:0,54,1181	0/0:25,0:25:75.20:0,75,1625	0/0:18,0:18:54.13:0,54,1299	0/0:15,0:15:39.97:0,40,799	0/0:22,0:22:66.23:0,66,1702	0/0:20,0:20:60.20:0,60,1443	0/0:29,0:29:87.21:0,87,1981	0/0:29,0:29:87.27:0,87,2087	0/0:16,0:16:48.13:0,48,1136	0/0:22,0:22:66.13:0,66,1430	0/0:34,0:34:99:0,102,2419	0/0:21,0:21:63.19:0,63,1554	0/0:17,0:17:51.11:0,51,1109	0/0:7,0:7:21.03:0,21,368	0/0:17,0:17:48.08:0,48,906	0/0:17,0:17:51.15:0,51,1170	0/0:26,0:26:78.26:0,78,1775	0/0:21,0:21:60.16:0,60,1449	0/0:17,0:17:51.18:0,51,1326
chr10	64495978	.	GAAAA	G	10382.47	PASS	AB=1.000;AC=43;AF=0.768;AN=56;BaseQRankSum=2.342;DP=709;FS=0.000;HRun=13;HaplotypeScore=166.7385;InbreedingCoeff=0.7724;MQ=66.44;MQ0=1;MQRankSum=-2.716;QD=18.25;ReadPosRankSum=7.380;VQSLOD=1.3846;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,22:25:48.05:670,48,0	0/1:7,0:7:3.26:72,0,3	0/0:50,0:27:34.59:0,35,429	0/1:40,0:19:4.97:5,0,300	0/0:35,0:35:81.12:0,81,1064	0/1:15,0:15:4.98:190,0,5	1/1:31,0:31:68.77:687,69,0	1/1:25,0:24:40.05:437,40,0	1/1:20,0:20:42.07:407,42,0	1/1:32,0:31:69.78:652,70,0	1/1:42,0:42:72.71:856,73,0	1/1:22,0:22:53.95:515,54,0	0/0:12,0:14:39.13:0,39,864	1/1:17,0:17:42.02:390,42,0	1/1:18,0:18:29.81:297,30,0	1/1:20,0:20:21.97:270,22,0	1/1:29,0:29:63.05:628,63,0	1/1:34,0:34:45.32:571,45,0	1/1:31,0:30:14.91:464,15,0	1/1:29,0:29:59.06:619,59,0	1/1:19,0:19:36.43:332,36,0	1/1:17,0:17:29.92:310,30,0	0/0:22,0:22:54.18:0,54,1136	0/0:16,0:16:42.06:0,42,928	1/1:19,0:19:38.81:385,39,0	1/1:37,0:37:41.52:741,42,0	1/1:25,0:25:51.06:529,51,0	1/1:15,0:15:36.04:354,36,0
chr10	64495988	.	AAAAC	A	20128.49	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-1.252;DP=701;FS=5.579;HRun=0;HaplotypeScore=129.5621;InbreedingCoeff=0.9939;MQ=69.05;MQ0=1;MQRankSum=-4.244;QD=37.41;ReadPosRankSum=4.036;VQSLOD=4.6438;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:24:48.08:670,48,0	1/1:1,4:5:13.51:182,14,0	0/0:41,0:22:41.06:0,41,553	0/0:32,0:17:21.82:0,22,439	0/0:31,0:31:50.75:0,51,398	1/1:2,16:18:23.26:454,23,0	1/1:0,29:29:69.24:1222,69,0	1/1:1,30:30:87:1094,87,0	1/1:0,22:22:42.14:749,42,0	1/1:2,36:37:99:1515,108,0	1/1:0,41:41:99:1661,108,0	1/1:0,21:21:57.13:978,57,0	0/0:16,0:16:45.14:0,45,1033	1/1:0,18:18:42.14:750,42,0	1/1:2,16:18:26.65:557,27,0	1/1:1,19:20:35.84:565,36,0	1/1:1,30:31:63.21:1120,63,0	1/1:0,32:32:63.22:1124,63,0	1/1:4,26:29:83.67:1160,84,0	1/1:0,31:31:92.65:1267,93,0	1/1:0,16:16:36.04:607,36,0	1/1:1,15:16:41.84:594,42,0	0/0:23,0:23:69.18:0,69,1514	0/0:17,0:17:48.14:0,48,1090	1/1:0,21:21:38.97:691,39,0	1/1:0,35:35:99:1607,99,0	1/1:1,25:26:54.12:922,54,0	1/1:0,15:15:36.12:641,36,0
chr10	64495989	.	AAAC	A	11198.07	PASS	AB=1.000;AC=45;AF=0.804;AN=56;BaseQRankSum=4.467;DP=699;FS=6.989;HRun=0;HaplotypeScore=149.0058;InbreedingCoeff=0.8955;MQ=70.40;MQ0=1;MQRankSum=-3.296;QD=19.75;ReadPosRankSum=5.556;VQSLOD=3.8071;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:24:39.99:276,40,0	1/1:4,1:5:14.95:138,15,0	0/0:42,0:22:35.22:0,35,480	0/0:34,0:18:38.83:0,39,439	0/1:30,0:30:9.13:9,0,81	1/1:17,1:18:33:321,33,0	1/1:29,0:29:69.09:656,69,0	1/1:31,0:30:77.10:700,77,0	1/1:22,0:22:42.07:404,42,0	1/1:38,0:37:99:919,102,0	1/1:41,0:41:99:899,99,0	1/1:21,0:21:49.74:511,50,0	0/0:16,0:16:45.14:0,45,852	1/1:18,0:18:42.07:405,42,0	1/1:18,0:18:21.40:300,21,0	1/1:19,1:20:34.92:327,35,0	1/1:30,0:30:63.09:603,63,0	1/1:32,0:32:63.10:607,63,0	1/1:28,2:29:68.44:682,68,0	1/1:31,0:31:65.59:678,66,0	1/1:16,0:16:28.61:311,29,0	1/1:16,0:16:41.78:354,42,0	0/0:23,0:23:69.17:0,69,1282	0/0:17,0:17:48.04:0,48,885	1/1:21,0:21:38.97:371,39,0	1/1:35,0:35:96.51:893,97,0	1/1:26,0:26:46.78:489,47,0	1/1:15,0:15:36.06:346,36,0
chr10	64495991	.	AC	A	7725.42	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=7.057;DP=690;FS=4.957;HRun=2;HaplotypeScore=137.9320;InbreedingCoeff=0.9940;MQ=70.73;MQ0=1;MQRankSum=-4.329;QD=13.67;ReadPosRankSum=2.849;VQSLOD=4.4960;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:24:33.30:105,33,0	1/1:5,0:5:13.92:75,14,0	0/0:37,0:20:28.70:0,29,336	0/0:33,0:19:23.13:0,23,274	1/1:6,24:30:74.55:754,75,0	1/1:17,0:17:29.31:174,29,0	1/1:29,0:29:67.15:398,67,0	1/1:30,0:30:79.88:559,80,0	1/1:22,0:22:40.92:238,41,0	1/1:38,0:37:99:646,100,0	1/1:41,0:41:97.77:561,98,0	1/1:21,0:21:52.60:304,53,0	0/0:15,0:15:38.16:0,38,443	1/1:18,0:18:40.94:239,41,0	1/1:18,0:18:32.13:185,32,0	1/1:20,0:20:31.03:176,31,0	1/1:30,0:30:61.35:354,61,0	1/1:32,0:32:61.41:358,61,0	1/1:30,0:29:68.96:416,69,0	1/1:31,0:31:74.61:459,75,0	1/1:16,0:16:32.17:188,32,0	1/1:15,1:16:40.99:247,41,0	0/0:23,0:23:66.15:0,66,772	0/0:16,0:16:43.86:0,44,492	1/1:21,0:21:37.93:218,38,0	1/1:35,0:35:93.90:579,94,0	1/1:26,0:26:49.65:288,50,0	1/1:15,0:15:35.09:203,35,0
chr10	64496321	.	A	AC	723.46	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.804;DP=614;FS=2.798;HRun=0;HaplotypeScore=94.1683;InbreedingCoeff=0.9015;MQ=54.13;MQ0=14;MQRankSum=-6.747;QD=24.95;ReadPosRankSum=-0.405;VQSLOD=3.9660;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,24:27:50.84:818,51,0	0/0:2,0:2:6.02:0,6,84	0/0:25,0:11:32.89:0,33,374	0/0:22,0:9:24.97:0,25,331	0/0:27,0:27:80.31:0,80,964	0/0:18,0:17:48.15:0,48,654	0/0:19,0:19:54.06:0,54,691	0/0:32,0:30:90.14:0,90,1099	0/0:18,0:18:25.56:0,26,431	0/0:25,0:24:69.20:0,69,941	0/0:24,0:24:60.16:0,60,814	0/0:24,0:24:60.20:0,60,837	0/0:11,0:10:27.09:0,27,377	0/0:22,0:20:54.17:0,54,738	0/0:15,0:15:42.13:0,42,571	0/0:14,0:13:34.34:0,34,434	0/0:37,0:37:95.48:0,95,1250	0/0:21,0:20:60.17:0,60,814	0/0:23,0:20:60.14:0,60,763	0/0:21,0:21:63.15:0,63,834	0/0:20,0:20:48.15:0,48,652	0/0:19,0:19:51.15:0,51,678	0/0:20,0:20:57.18:0,57,782	0/0:32,0:32:90.29:0,90,1243	0/0:16,0:16:42.13:0,42,571	0/0:24,0:23:69.18:0,69,924	0/0:32,0:32:87.75:0,88,1197	0/0:22,0:22:56.98:0,57,766
chr10	64496325	.	C	CA	425.11	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.822;DP=602;FS=4.280;HRun=6;HaplotypeScore=95.2270;InbreedingCoeff=0.5287;MQ=54.66;MQ0=11;MQRankSum=-7.241;QD=14.17;ReadPosRankSum=0.084;VQSLOD=3.1181;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:16,14:28:2.29:502,2,0	0/0:2,0:2:6.02:0,6,74	0/0:25,0:11:0.82:0,1,247	0/0:22,0:10:25.37:0,25,275	0/0:27,0:27:81.24:0,81,948	0/0:18,0:18:45.14:0,45,557	0/0:17,0:17:45.14:0,45,555	0/0:26,0:24:72.07:0,72,793	0/0:16,0:16:35.11:0,35,372	0/0:25,0:24:69.19:0,69,829	0/0:22,0:22:58.73:0,59,709	0/0:24,0:24:66.16:0,66,769	0/0:11,0:10:27.08:0,27,334	0/0:22,0:20:54.17:0,54,667	0/0:15,0:15:42.13:0,42,515	0/0:12,0:12:21.17:0,21,360	0/0:36,0:36:92.26:0,92,1081	0/0:22,0:21:60.17:0,60,727	0/0:19,0:17:51.16:0,51,631	0/0:23,0:23:69.16:0,69,811	0/0:21,0:21:51.13:0,51,607	0/0:18,0:18:51.16:0,51,630	0/0:21,0:21:60.19:0,60,742	0/0:32,0:32:90.14:0,90,1047	0/0:16,0:16:42.12:0,42,509	0/0:24,0:24:69.22:0,69,852	0/0:33,0:33:96.20:0,96,1139	0/0:22,0:22:57.18:0,57,706
chr10	64496338	.	AAC	A	266.48	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=3.911;DP=586;FS=1.440;HRun=0;HaplotypeScore=110.1569;InbreedingCoeff=0.5050;MQ=58.60;MQ0=7;MQRankSum=-2.563;QD=6.34;ReadPosRankSum=-0.739;VQSLOD=3.3019;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:26:10.27:46,0,10	0/0:2,0:2:5.86:0,6,36	0/0:23,0:12:20.28:0,20,199	0/0:24,0:14:22.99:0,23,258	0/0:31,0:31:61.87:0,62,372	0/0:19,0:19:49.02:0,49,330	0/0:17,0:17:39.80:0,40,268	0/0:20,0:19:26.25:0,26,311	1/1:4,10:14:6.33:315,6,0	0/0:24,0:24:64.15:0,64,358	0/0:23,0:23:52.10:0,52,319	0/0:18,0:18:45.90:0,46,303	0/0:10,0:9:24.03:0,24,315	0/0:21,0:21:45.66:0,46,244	0/0:14,0:14:27.17:0,27,183	0/0:13,0:13:6.63:0,7,141	0/0:34,0:34:15.09:0,15,333	0/0:20,0:20:41.15:0,41,247	0/0:20,0:18:42.73:0,43,287	0/0:25,0:25:61.10:0,61,391	0/0:22,0:22:30.13:0,30,229	0/0:17,0:17:16.89:0,17,218	0/0:21,0:21:50.42:0,50,786	0/0:28,0:28:75.03:0,75,998	0/0:17,0:17:39.76:0,40,238	0/0:25,0:25:62.62:0,63,406	0/0:32,0:32:86.81:0,87,473	0/0:24,0:24:58.38:0,58,395
chr10	64496340	.	CA	C	6345.08	PASS	AB=0.678;AC=41;AF=0.732;AN=56;BaseQRankSum=3.413;DP=604;FS=14.594;HRun=12;HaplotypeScore=83.0829;InbreedingCoeff=0.4371;MQ=60.41;MQ0=6;MQRankSum=-0.907;QD=12.90;ReadPosRankSum=2.446;VQSLOD=3.4378;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:25:34.63:112,35,0	0/1:1,3:4:17.19:17,0,24	0/0:22,0:11:11.66:0,12,106	0/0:28,0:17:17.62:0,18,206	1/1:7,0:29:3.17:66,3,0	0/1:6,14:20:16.27:257,0,16	0/1:7,11:19:49.68:157,0,50	1/1:19,0:18:0.31:95,0,0	0/1:15,0:15:12.70:13,0,18	1/1:4,22:26:35.47:453,35,0	1/1:1,22:23:56.76:441,57,0	1/1:6,14:20:5.40:225,5,0	0/0:11,0:10:21.03:0,21,206	1/1:0,20:21:55.83:424,56,0	1/1:3,11:14:26.88:209,27,0	1/1:3,12:15:29.82:227,30,0	1/1:3,29:34:83.92:631,84,0	1/1:5,14:19:43.61:330,44,0	0/1:8,13:20:19.08:228,0,19	1/1:8,18:27:31.28:412,31,0	1/1:3,18:23:6.51:213,7,0	1/1:4,13:18:4.42:207,4,0	0/0:21,1:22:33.80:0,34,501	0/0:27,0:29:42.78:0,43,571	1/1:3,14:17:11.37:271,11,0	1/1:7,19:26:40.19:421,40,0	1/1:3,29:32:80.03:643,80,0	1/1:5,18:23:14.39:295,14,0
chr10	64496342	.	A	AC	249.24	PASS	AB=0.952;AC=3;AF=0.054;AN=56;BaseQRankSum=2.555;DP=607;FS=1.492;HRun=0;HaplotypeScore=110.1211;InbreedingCoeff=0.4806;MQ=60.47;MQ0=6;MQRankSum=-3.626;QD=5.54;ReadPosRankSum=-1.599;VQSLOD=3.2266;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:23,2:23:3.37:139,3,0	0/0:4,0:4:5.99:0,6,62	0/0:23,0:12:26.84:0,27,267	0/0:26,0:15:10.55:0,11,281	0/0:28,0:28:50.33:0,50,473	0/0:19,0:19:48.54:0,49,371	0/0:19,0:19:41.27:0,41,346	0/1:19,1:19:9.69:202,0,10	0/0:16,0:16:30.33:0,30,245	0/0:25,0:25:66.96:0,67,485	0/0:24,0:24:61.27:0,61,440	0/0:21,0:21:50.38:0,50,407	0/0:11,0:10:27.07:0,27,330	0/0:22,0:22:55.53:0,56,389	0/0:15,0:15:37.74:0,38,268	0/0:14,0:14:34.58:0,35,237	0/0:33,0:33:83.13:0,83,589	0/0:19,1:21:27.80:0,28,325	0/0:23,0:22:58.14:0,58,436	0/0:27,0:27:78.73:0,79,571	0/0:23,0:23:43.39:0,43,314	0/0:18,0:18:44.14:0,44,343	0/0:22,0:22:66.03:0,66,803	0/0:28,0:28:69.55:0,70,901	0/0:17,1:18:43.84:0,44,327	0/0:25,0:25:67.90:0,68,469	0/0:34,0:34:93.68:0,94,678	0/0:23,0:23:56.79:0,57,447
chr10	64497523	.	AC	A	3968.78	PASS	AC=40;AF=0.909;AN=44;BaseQRankSum=1.121;DP=406;FS=0.000;HRun=4;HaplotypeScore=32.9011;InbreedingCoeff=0.5105;MQ=23.06;MQ0=201;MQRankSum=-1.408;QD=12.56;ReadPosRankSum=0.400;VQSLOD=0.9746;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,8:2:3.01:36,3,0	1/1:0,8:7:21.06:251,21,0	./.	./.	1/1:2,25:19:27.08:318,27,0	1/1:1,13:7:9.03:107,9,0	./.	./.	1/1:0,12:8:12.04:143,12,0	1/1:3,23:15:42.09:484,42,0	1/1:0,24:15:12.04:143,12,0	1/1:1,17:6:3.01:36,3,0	0/0:18,0:8:12.04:0,12,167	1/1:0,14:8:18.06:215,18,0	1/1:2,12:10:6.02:72,6,0	1/1:2,9:4:9.03:108,9,0	1/1:1,18:4:3.01:36,3,0	1/1:1,8:1:3.01:36,3,0	1/1:1,8:1:3.01:36,3,0	1/1:1,24:21:57.17:677,57,0	./.	1/1:0,10:10:18.05:215,18,0	0/0:17,0:11:14.97:0,15,209	./.	1/1:0,10:5:12.04:143,12,0	1/1:1,16:12:33.10:395,33,0	1/1:3,28:23:41.77:482,42,0	1/1:3,5:6:3.01:36,3,0
chr10	64497825	.	GA	G	1517.75	PASS	AB=0.526;AC=37;AF=0.804;AN=46;BaseQRankSum=0.146;DP=306;FS=0.000;HRun=10;HaplotypeScore=23.2984;InbreedingCoeff=0.3381;MQ=22.13;MQ0=163;MQRankSum=1.019;QD=6.40;ReadPosRankSum=0.622;VQSLOD=-0.3654;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,15:4:2.99:26,3,0	1/1:0,3:2:2.99:26,3,0	./.	./.	1/1:20,0:13:2.35:4,2,0	./.	1/1:2,6:2:3:26,3,0	1/1:3,10:3:9:78,9,0	0/0:10,0:6:2.97:0,3,20	1/1:2,9:8:20.99:182,21,0	1/1:3,21:14:11.99:104,12,0	1/1:2,10:4:3:26,3,0	0/0:10,0:5:0:0,0,0	1/1:1,5:4:6:52,6,0	1/1:4,9:7:11.99:104,12,0	0/1:1,9:6:8.68:66,0,9	1/1:2,10:1:3:26,3,0	1/1:2,9:2:3:26,3,0	./.	1/1:0,12:9:24:208,24,0	./.	1/1:1,6:7:9:78,9,0	0/0:6,0:2:3.01:0,3,33	0/0:10,0:3:3.01:0,3,33	1/1:2,18:17:29.98:260,30,0	1/1:3,10:7:21:182,21,0	1/1:1,9:7:6:53,6,0	1/1:1,14:5:12:104,12,0
chr10	64497834	.	AAT	A	139.83	PASS	AC=2;AF=0.043;AN=46;BaseQRankSum=-3.336;DP=314;FS=0.000;HRun=0;HaplotypeScore=32.8927;InbreedingCoeff=0.2872;MQ=22.90;MQ0=158;MQRankSum=-1.151;QD=6.66;ReadPosRankSum=0.687;VQSLOD=2.4056;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:4:5.82:0,6,33	0/0:3,0:2:2.88:0,3,15	./.	./.	1/1:1,20:13:18.02:228,18,0	0/0:5,0:3:2.92:0,3,17	0/0:9,0:4:8.72:0,9,49	0/0:21,0:6:17.64:0,18,122	0/0:10,0:7:2.94:0,3,18	0/0:12,0:8:23.23:0,23,135	0/0:23,0:14:11.50:0,12,61	0/0:11,0:4:5.82:0,6,33	./.	0/0:5,0:3:5.75:0,6,31	0/0:12,0:9:11.42:0,11,58	0/0:10,0:6:8.59:0,9,44	0/0:11,0:1:2.88:0,3,15	0/0:10,0:2:2.88:0,3,15	./.	0/0:15,0:10:25.93:0,26,139	./.	0/0:6,0:6:8.63:0,9,46	0/0:7,0:2:3.01:0,3,51	0/0:12,0:5:6:0,6,76	0/0:20,0:17:34.60:0,35,187	0/0:13,0:9:26.23:0,26,169	0/0:11,0:9:8.61:0,9,67	0/0:15,0:5:11.53:0,12,62
chr10	64497924	.	G	GA	117.71	PASS	AC=18;AF=0.692;AN=26;BaseQRankSum=1.505;DP=69;FS=25.206;HRun=0;HaplotypeScore=12.0466;InbreedingCoeff=0.5018;MQ=42.30;MQ0=11;MQRankSum=-3.676;QD=6.20;ReadPosRankSum=-4.367;VQSLOD=1.0013;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	0/0:3,0:2:6.01:0,6,68	./.	1/1:0,1:1:2.94:18,3,0	./.	1/1:3,0:2:5.97:46,6,0	1/1:2,0:1:2.96:19,3,0	1/1:3,0:1:3:25,3,0	1/1:1,0:1:2.94:18,3,0	1/1:0,1:1:2.96:19,3,0	0/0:10,0:9:11.93:0,12,165	./.	./.	./.	./.	./.	./.	1/1:1,1:1:2.94:18,3,0	./.	./.	0/0:7,0:5:9.03:0,9,121	0/0:14,0:11:21.07:0,21,292	./.	1/1:3,0:2:5.97:46,6,0	1/1:3,0:2:2.98:21,3,0	./.
chr10	64498306	.	TG	T	2806.25	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=12.403;DP=657;FS=5.484;HRun=3;HaplotypeScore=79.3327;InbreedingCoeff=0.9989;MQ=70.63;MQ0=0;MQRankSum=-9.722;QD=28.93;ReadPosRankSum=0.245;VQSLOD=2.8847;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,33:37:90.08:1071,90,0	0/0:15,0:15:42.12:0,42,563	0/0:22,0:23:60.87:0,61,871	0/0:15,0:13:32.67:0,33,440	1/1:0,35:35:84.26:1038,84,0	0/0:29,0:29:78.21:0,78,1098	0/0:20,0:20:60.19:0,60,847	0/0:30,0:30:87.28:0,87,1237	1/1:4,21:25:69.20:840,69,0	0/0:29,0:29:84.28:0,84,1194	0/0:22,0:22:54.09:0,54,707	0/0:21,0:21:63.21:0,63,906	0/0:17,0:17:51.17:0,51,727	0/0:13,0:13:30.07:0,30,381	0/0:27,0:27:75.25:0,75,1080	0/0:17,0:17:48.16:0,48,691	0/0:30,0:30:87.28:0,87,1227	0/0:12,0:12:36.12:0,36,511	0/0:30,0:30:84.26:0,84,1181	0/0:25,0:25:60.16:0,60,826	0/0:33,0:33:96.31:0,96,1362	0/0:19,0:19:54.17:0,54,759	0/0:10,0:10:24.08:0,24,343	0/0:28,0:28:84.28:0,84,1208	0/0:18,0:18:48.11:0,48,641	0/0:22,0:22:66.21:0,66,922	0/0:32,0:32:96.32:0,96,1372	0/0:23,0:23:60.20:0,60,862
chr10	64498321	.	AC	A	1808.04	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=10.530;DP=624;FS=15.375;HRun=3;HaplotypeScore=78.3139;InbreedingCoeff=0.9988;MQ=76.64;MQ0=0;MQRankSum=-9.786;QD=31.17;ReadPosRankSum=0.380;VQSLOD=2.0756;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,35:38:96.16:1187,96,0	0/0:14,0:14:39.09:0,39,523	0/0:22,0:22:63.20:0,63,881	0/0:14,0:14:39.12:0,39,537	0/0:35,0:35:84.28:0,84,1189	0/0:22,0:22:66.22:0,66,950	0/0:19,0:19:57.19:0,57,820	0/0:28,0:28:81.26:0,81,1148	1/1:0,20:20:60.19:743,60,0	0/0:29,0:29:87.29:0,87,1238	0/0:20,0:20:45.11:0,45,623	0/0:19,0:19:57.19:0,57,821	0/0:17,0:17:51.17:0,51,733	0/0:12,0:12:36.12:0,36,518	0/0:23,0:23:60.20:0,60,864	0/0:18,0:18:54.18:0,54,778	0/0:27,0:27:81.27:0,81,1166	0/0:14,0:14:42.14:0,42,605	0/0:34,0:34:99:0,99,1406	0/0:24,0:24:60.13:0,60,805	0/0:35,0:35:99:0,99,1425	0/0:16,0:16:48.12:0,48,663	0/0:10,0:9:24.04:0,24,322	0/0:27,0:27:78.26:0,78,1123	0/0:15,0:15:42.14:0,42,604	0/0:22,0:22:66.21:0,66,920	0/0:29,0:29:87.28:0,87,1229	0/0:21,0:21:63.21:0,63,905
chr10	64499154	.	C	CT	1188.34	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-7.609;DP=755;FS=0.000;HRun=6;HaplotypeScore=74.4859;InbreedingCoeff=0.9051;MQ=81.06;MQ0=0;MQRankSum=-2.981;QD=29.71;ReadPosRankSum=-0.513;VQSLOD=3.9003;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,38:40:99:1283,102,0	0/0:14,0:14:42.10:0,42,428	0/0:29,0:29:68.36:0,68,690	0/0:22,0:22:57.60:0,58,582	0/0:25,0:25:63.12:0,63,636	0/0:24,0:24:69.16:0,69,703	0/0:34,0:34:84.18:0,84,856	0/0:29,0:29:69.13:0,69,699	0/0:25,0:25:75.17:0,75,764	0/0:29,0:29:69.14:0,69,700	0/0:13,0:13:36.08:0,36,367	0/0:37,0:37:99:0,99,1010	0/0:24,0:24:66.14:0,66,673	0/0:27,0:27:78.18:0,78,795	0/0:39,0:39:99:0,108,1102	0/0:30,0:30:78.18:0,78,796	0/0:31,0:31:87.19:0,87,887	0/0:25,0:25:63.14:0,63,641	0/0:27,0:27:78.16:0,78,790	0/0:18,0:18:45.09:0,45,459	0/0:41,0:41:96.18:0,96,971	0/0:21,0:21:51.10:0,51,513	0/0:16,0:16:45.08:0,45,452	0/0:39,0:39:99:0,117,1183	0/0:32,0:32:87.19:0,87,886	0/0:24,0:24:60.11:0,60,600	0/0:38,0:38:99:0,102,1040	0/0:2,0:2:6.01:0,6,61
chr10	64503273	.	G	GA	803.58	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-2.540;DP=754;FS=11.031;HRun=1;HaplotypeScore=73.4272;InbreedingCoeff=0.9995;MQ=81.42;MQ0=0;MQRankSum=-2.588;QD=33.48;ReadPosRankSum=1.371;VQSLOD=2.3677;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,153,1922	0/0:13,0:13:39.11:0,39,491	0/0:16,0:17:31.05:0,31,392	0/0:20,0:21:42.48:0,42,538	1/1:2,22:24:60.20:898,60,0	0/0:21,0:21:63.19:0,63,803	0/0:24,0:24:72.22:0,72,921	0/0:21,0:21:60.20:0,60,779	0/0:29,0:29:84.27:0,84,1090	0/0:35,0:35:99:0,102,1324	0/0:19,0:19:57.17:0,57,725	0/0:43,0:43:99:0,129,1674	0/0:17,0:17:51.15:0,51,647	0/0:37,0:37:99:0,105,1363	0/0:34,0:34:99:0,99,1285	0/0:18,0:18:54.18:0,54,700	0/0:28,0:28:84.27:0,84,1090	0/0:25,0:25:75.18:0,75,924	0/0:21,0:21:63.20:0,63,818	0/0:27,0:27:72.23:0,72,935	0/0:53,0:53:99:0,153,1971	0/0:23,0:23:69.22:0,69,895	0/0:29,0:29:87.28:0,87,1130	0/0:27,0:27:81.26:0,81,1050	0/0:21,0:21:63.18:0,63,802	0/0:34,0:34:99:0,102,1325	0/0:21,0:21:60.19:0,60,779	0/0:19,0:19:57.17:0,57,725
chr10	64507828	.	TTCAATAATATGC	T	1143.26	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.579;DP=675;FS=2.633;HRun=0;HaplotypeScore=224.5719;InbreedingCoeff=0.9887;MQ=72.00;MQ0=0;MQRankSum=-5.688;QD=43.97;ReadPosRankSum=-1.363;VQSLOD=3.3252;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,111,6664	0/0:9,0:9:27.09:0,27,1546	0/0:9,0:9:26.76:0,27,1321	0/0:10,0:10:27.01:0,27,1203	1/1:6,20:26:33.11:1238,33,0	0/0:19,0:19:57.20:0,57,3279	0/0:35,0:35:99:0,99,5962	0/0:28,0:28:84.29:0,84,4126	0/0:18,0:18:54.17:0,54,3069	0/0:17,0:17:51.18:0,51,3028	0/0:14,0:14:39.13:0,39,2403	0/0:19,0:19:57.20:0,57,3328	0/0:30,0:30:87.28:0,87,5107	0/0:34,0:34:99:0,99,5583	0/0:25,0:25:66.23:0,66,3932	0/0:19,0:19:54.19:0,54,3136	0/0:41,0:41:99:0,117,6859	0/0:29,0:29:87.27:0,87,4616	0/0:22,0:22:66.23:0,66,3664	0/0:15,0:15:45.15:0,45,2681	0/0:38,0:38:99:0,111,6694	0/0:22,0:22:63.21:0,63,3572	0/0:18,0:18:54.19:0,54,3211	0/0:40,0:40:99:0,114,6994	0/0:29,0:29:84.29:0,84,4982	0/0:34,0:34:99:0,99,5824	0/0:31,0:30:87.30:0,87,5060	0/0:7,0:7:18.06:0,18,1109
chr10	64508895	.	AAACG	A	982.84	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.023;DP=835;FS=12.249;HRun=0;HaplotypeScore=132.6376;InbreedingCoeff=0.9996;MQ=79.92;MQ0=0;MQRankSum=-3.084;QD=33.89;ReadPosRankSum=1.461;VQSLOD=3.2321;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:62,0:62:99:0,184,4977	0/0:11,0:11:33.11:0,33,903	0/0:21,0:21:60.19:0,60,1601	0/0:27,0:27:75.22:0,75,1812	1/1:4,25:29:54.18:1078,54,0	0/0:26,0:26:75.24:0,75,1977	0/0:35,0:35:99:0,102,2836	0/0:31,0:30:87.30:0,87,2388	0/0:27,0:27:81.28:0,81,2183	0/0:55,0:55:99:0,166,4443	0/0:14,0:14:42.14:0,42,1170	0/0:29,0:29:81.28:0,81,2175	0/0:27,0:27:78.27:0,78,2170	0/0:32,0:32:96.32:0,96,2545	0/0:34,0:34:99:0,102,2734	0/0:23,0:23:69.24:0,69,1885	0/0:35,0:35:99:0,102,2776	0/0:21,0:21:60.17:0,60,1615	0/0:24,0:24:69.24:0,69,1869	0/0:25,0:25:75.26:0,75,2038	0/0:45,0:45:99:0,129,3568	0/0:35,0:35:99:0,99,2768	0/0:27,0:27:78.25:0,78,2047	0/0:34,0:34:99:0,102,2852	0/0:23,0:23:69.24:0,69,1908	0/0:39,0:39:99:0,114,3105	0/0:32,0:32:96.33:0,96,2598	0/0:12,0:12:36.12:0,36,961
chr10	64509400	.	T	TAA	1885.87	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=1.554;DP=629;FS=0.000;HRun=10;HaplotypeScore=84.3932;InbreedingCoeff=0.9633;MQ=82.84;MQ0=0;MQRankSum=-0.522;QD=14.97;ReadPosRankSum=-2.081;VQSLOD=1.6521;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,36:43:82.74:1123,83,0	0/0:13,0:13:5.01:0,5,250	0/0:21,0:20:33.29:0,33,320	0/0:20,0:20:29.47:0,29,275	1/1:5,14:22:40.92:453,41,0	0/0:13,0:15:35.53:0,36,329	0/0:30,0:31:71.84:0,72,774	1/1:6,1:36:74.30:338,74,0	1/1:5,0:25:37.43:132,37,0	0/0:15,0:15:39.08:0,39,397	0/0:19,0:19:54.09:0,54,536	0/0:26,0:26:75.12:0,75,750	0/0:30,0:30:72.10:0,72,726	0/0:22,0:23:47.76:0,48,469	0/0:30,0:30:81.09:0,81,793	0/0:18,0:19:41.78:0,42,471	0/0:28,0:28:78.16:0,78,793	0/0:20,0:20:54.11:0,54,549	0/0:18,0:18:39:0,39,390	0/0:22,0:24:43.53:0,44,526	0/0:32,0:32:43.94:0,44,671	0/0:20,0:20:41.99:0,42,421	0/0:20,0:21:59.55:0,60,560	0/0:16,0:15:36.05:0,36,366	0/0:18,0:18:36.02:0,36,366	0/0:20,0:20:48.04:0,48,493	0/0:17,0:17:42.07:0,42,427	0/0:7,0:7:17.96:0,18,162
chr10	64509861	.	A	AACAC	17939.19	PASS	AB=0.598;AC=38;AF=0.679;AN=56;BaseQRankSum=-9.215;DP=971;FS=9.487;HRun=0;HaplotypeScore=172.5009;InbreedingCoeff=0.7438;MQ=57.83;MQ0=18;MQRankSum=0.559;QD=27.26;ReadPosRankSum=0.178;VQSLOD=3.8409;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:16,2:45:3.63:11,4,0	1/1:8,4:12:15.05:340,15,0	0/0:58,0:21:6.01:0,6,74	0/0:55,0:20:3.01:0,3,37	0/0:6,0:37:50.72:0,51,474	0/1:9,15:30:9.50:813,0,10	1/1:12,12:28:27.09:650,27,0	0/0:35,0:32:4.13:0,4,415	0/0:7,0:36:60.39:0,60,654	1/1:12,20:39:74.07:1144,74,0	1/1:11,12:24:26.29:451,26,0	1/1:12,17:34:35.32:1177,35,0	0/0:26,0:28:57.04:0,57,823	1/1:5,28:37:68.55:1592,69,0	1/1:13,26:45:66.51:1375,67,0	1/1:10,24:38:72.33:1495,72,0	1/1:6,12:21:20.81:448,21,0	1/1:10,6:19:8.23:630,8,0	1/1:10,5:14:20.76:305,21,0	1/1:15,20:38:41.88:913,42,0	1/1:29,21:55:48.09:1717,48,0	1/1:7,17:27:35.32:691,35,0	0/0:32,0:34:43.84:0,44,833	0/0:27,0:29:49.20:0,49,759	0/1:10,16:28:10.04:712,0,10	1/1:14,24:40:77.70:1547,78,0	1/1:14,15:33:47.37:941,47,0	1/1:15,23:44:50.36:988,50,0
chr10	64509933	.	G	GCA	1670.37	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=0.470;DP=928;FS=6.968;HRun=0;HaplotypeScore=178.3249;InbreedingCoeff=0.8061;MQ=59.97;MQ0=6;MQRankSum=0.907;QD=11.52;ReadPosRankSum=-0.983;VQSLOD=2.8631;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:24,29:52:81.60:1266,82,0	0/0:7,0:7:12.04:0,12,143	0/0:33,0:22:3.05:0,3,180	0/0:46,0:36:37.66:0,38,367	1/1:12,2:24:20.99:182,21,0	0/0:28,0:29:44.97:0,45,514	0/0:31,0:33:62.82:0,63,684	1/1:50,0:48:50.71:361,51,0	0/0:41,0:43:99:0,108,1204	0/0:41,0:42:91.68:0,92,1049	0/0:23,0:23:53.98:0,54,606	0/0:40,0:42:89.07:0,89,1015	0/0:35,0:36:90.08:0,90,1027	0/0:23,0:23:29.92:0,30,335	0/0:44,0:49:99:0,104,1108	0/0:40,0:41:99:0,102,1171	0/0:22,0:22:51.10:0,51,572	0/0:26,0:26:63.62:0,64,735	0/0:24,0:25:50.12:0,50,530	0/0:28,0:28:35.22:0,35,641	0/0:82,0:82:99:0,159,1823	0/0:22,0:22:51.11:0,51,591	0/0:26,0:27:63.01:0,63,717	0/0:35,0:36:60.01:0,60,693	0/1:17,0:17:6.38:6,0,337	0/0:26,0:29:65.69:0,66,712	0/0:23,0:23:51.13:0,51,583	0/0:12,0:14:23.74:0,24,242
chr10	64510185	.	T	TAC	1009.84	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.090;DP=1080;FS=6.188;HRun=0;HaplotypeScore=180.5375;InbreedingCoeff=0.9997;MQ=61.74;MQ0=3;MQRankSum=1.286;QD=22.44;ReadPosRankSum=-0.240;VQSLOD=3.6986;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,102,1277	0/0:13,0:13:36.11:0,36,450	0/0:43,0:32:56.86:0,57,645	0/0:47,0:36:42.21:0,42,718	1/1:13,32:45:68.98:1105,69,0	0/0:37,0:37:99:0,102,1277	0/0:30,0:30:63.18:0,63,777	0/0:57,0:57:93.61:0,94,1531	0/0:40,0:40:99:0,108,1333	0/0:49,0:49:99:0,120,1473	0/0:23,0:23:60.18:0,60,750	0/0:53,0:53:99:0,129,1583	0/0:49,0:48:99:0,126,1560	0/0:31,0:29:69.08:0,69,838	0/0:39,0:39:99:0,102,1263	0/0:43,0:43:99:0,111,1390	0/0:19,0:19:51.07:0,51,610	0/0:39,0:39:96.10:0,96,1179	0/0:17,0:16:41.65:0,42,533	0/0:38,0:38:99:0,102,1253	0/0:90,0:90:99:0,185,2617	0/0:31,0:31:72.20:0,72,883	0/0:31,0:31:75.21:0,75,927	0/0:51,0:51:99:0,120,1521	0/0:32,0:32:78.24:0,78,980	0/0:49,0:49:99:0,126,1555	0/0:25,0:26:69.03:0,69,833	0/0:13,0:13:36.07:0,36,426
chr10	64510198	.	A	ACT	791.27	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.654;DP=1059;FS=6.194;HRun=0;HaplotypeScore=174.8054;InbreedingCoeff=0.9969;MQ=58.34;MQ0=7;MQRankSum=0.256;QD=15.22;ReadPosRankSum=1.121;VQSLOD=3.2015;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:93.17:0,93,1148	0/0:13,0:13:27.09:0,27,355	0/0:37,0:25:48.07:0,48,594	0/0:47,0:32:62.69:0,63,751	1/1:18,32:52:44.66:886,45,0	0/0:35,0:35:93.25:0,93,1188	0/0:29,0:29:68.36:0,68,817	0/0:49,0:49:99:0,117,1493	0/0:42,0:42:99:0,111,1380	0/0:49,0:49:99:0,132,1731	0/0:23,0:23:60.19:0,60,788	0/0:47,0:47:99:0,126,1549	0/0:48,0:47:99:0,132,1662	0/0:31,0:30:81.22:0,81,1045	0/0:41,0:41:99:0,114,1459	0/0:43,0:43:99:0,108,1352	0/0:21,0:21:54.16:0,54,691	0/0:35,0:35:96.29:0,96,1242	0/0:27,0:26:54.17:0,54,698	0/0:37,0:37:87.27:0,87,1128	0/0:89,0:89:99:0,225,2850	0/0:29,0:29:66.21:0,66,862	0/0:29,0:29:72.23:0,72,943	0/0:52,0:52:99:0,114,1463	0/0:29,0:29:84.19:0,84,1052	0/0:48,0:48:99:0,132,1680	0/0:24,0:24:72.11:0,72,887	0/0:11,0:11:24.08:0,24,315
chr10	64510424	.	CATCTT	C	1194.76	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.446;DP=794;FS=0.000;HRun=0;HaplotypeScore=148.6807;InbreedingCoeff=0.9998;MQ=89.00;MQ0=0;MQRankSum=-2.930;QD=42.67;ReadPosRankSum=1.966;VQSLOD=3.8485;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,135,4269	0/0:15,0:15:45.15:0,45,1460	0/0:25,0:25:74.60:0,75,2054	0/0:36,0:36:91.70:0,92,3071	1/1:0,28:28:57.19:1290,57,0	0/0:14,0:14:42.14:0,42,1398	0/0:33,0:33:99:0,99,3088	0/0:28,0:28:81.28:0,81,2424	0/0:29,0:29:87.30:0,87,2862	0/0:41,0:41:99:0,123,3872	0/0:20,0:20:57.20:0,57,1794	0/0:26,0:26:78.27:0,78,2521	0/0:26,0:26:78.27:0,78,2545	0/0:22,0:22:66.18:0,66,2040	0/0:37,0:37:99:0,111,3560	0/0:34,0:34:99:0,102,3356	0/0:37,0:37:99:0,105,3323	0/0:20,0:20:54.19:0,54,1772	0/0:27,0:27:81.28:0,81,2578	0/0:21,0:21:60.21:0,60,1995	0/0:40,0:40:99:0,117,3843	0/0:37,0:37:99:0,111,3549	0/0:16,0:16:48.16:0,48,1599	0/0:27,0:27:75.23:0,75,2400	0/0:26,0:26:75.26:0,75,2450	0/0:37,0:37:99:0,111,3632	0/0:34,0:34:99:0,102,3274	0/0:12,0:12:36.12:0,36,1166
chr10	64511293	.	CT	C	353.35	PASS	AB=0.889;AC=4;AF=0.071;AN=56;BaseQRankSum=3.166;DP=462;FS=3.479;HRun=13;HaplotypeScore=55.2272;InbreedingCoeff=0.4208;MQ=70.07;MQ0=7;MQRankSum=-1.704;QD=5.99;ReadPosRankSum=-3.633;VQSLOD=1.2520;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:19:30.02:0,30,281	0/0:8,0:8:24.04:0,24,233	0/0:7,0:8:11.67:0,12,87	0/1:15,0:12:10.81:11,0,25	0/0:8,0:26:48.60:0,49,265	0/0:17,0:17:30.01:0,30,283	0/0:20,0:20:32.99:0,33,309	1/1:14,23:34:36.26:420,36,0	0/0:9,0:9:15.02:0,15,146	0/0:13,0:13:24.02:0,24,226	0/0:15,0:15:33.03:0,33,314	0/0:13,0:13:27.04:0,27,263	0/0:11,1:13:7.94:0,8,216	0/1:5,2:7:4.89:35,0,5	0/0:16,1:17:14.11:0,14,282	0/0:16,0:16:38.91:0,39,379	0/0:36,0:35:41.54:0,42,540	0/0:29,3:32:38.46:0,38,499	0/0:23,0:22:41.81:0,42,391	0/0:20,2:21:2.87:0,3,264	0/0:7,0:7:12.01:0,12,112	0/0:4,0:4:12.01:0,12,111	0/0:4,0:4:6.01:0,6,58	0/0:11,0:11:26.85:0,27,233	0/0:15,1:16:8.14:0,8,241	0/0:18,0:17:35.88:0,36,328	0/0:19,0:19:42.02:0,42,399	0/0:15,0:13:30.04:0,30,286
chr10	64511673	.	T	TACACACACACAC	5106.84	PASS	AB=1.000;AC=45;AF=0.865;AN=52;BaseQRankSum=-1.298;DP=533;FS=12.355;HRun=0;HaplotypeScore=178.2950;InbreedingCoeff=0.4653;MQ=51.17;MQ0=20;MQRankSum=-0.309;QD=11.61;ReadPosRankSum=-2.268;VQSLOD=2.9014;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:36,0:34:25.44:435,25,0	1/1:11,0:10:6.02:130,6,0	./.	./.	0/0:19,0:26:11.90:0,12,228	1/1:21,0:21:17.82:291,18,0	1/1:25,0:24:12.96:204,13,0	1/1:30,0:28:11.60:68,12,0	1/1:11,0:11:5.96:43,6,0	1/1:35,0:33:34.33:664,34,0	1/1:7,0:7:3.01:87,3,0	1/1:12,0:16:2.92:124,3,0	0/0:11,0:11:8.92:0,9,220	1/1:19,0:19:12.04:273,12,0	1/1:20,0:17:6.93:50,7,0	1/1:10,4:17:3.01:173,3,0	1/1:27,0:26:11.97:229,12,0	1/1:11,0:11:9.29:372,9,0	1/1:13,0:12:18.53:464,19,0	1/1:13,0:11:6.02:149,6,0	1/1:26,0:23:2.99:24,3,0	1/1:9,0:8:3:25,3,0	0/0:15,0:16:15.01:0,15,318	0/1:25,0:28:6.84:7,0,774	1/1:14,0:13:3:25,3,0	1/1:19,0:25:26.84:587,27,0	1/1:17,0:17:21.06:655,21,0	1/1:7,0:7:4.55:28,5,0
chr10	64512587	.	T	TG	24799.30	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-14.886;DP=703;FS=14.811;HRun=0;HaplotypeScore=61.7508;InbreedingCoeff=0.9966;MQ=87.64;MQ0=0;MQRankSum=-4.518;QD=44.52;ReadPosRankSum=3.992;VQSLOD=3.5970;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,61:62:99:2686,169,0	1/1:0,5:5:15.05:239,15,0	0/0:24,0:24:60.20:0,60,839	0/0:23,0:23:57.08:0,57,719	1/1:0,14:14:36.12:575,36,0	1/1:0,17:17:45.15:720,45,0	1/1:1,31:32:84.29:1343,84,0	1/1:0,33:33:99:1582,99,0	0/0:30,1:31:43.58:0,44,1169	1/1:0,27:28:84.29:1332,84,0	1/1:2,14:16:42.14:671,42,0	1/1:0,21:21:60.20:959,60,0	0/0:22,0:22:66.22:0,66,923	1/1:1,25:26:75.26:1199,75,0	1/1:0,34:34:90.31:1438,90,0	1/1:0,22:22:63.21:1007,63,0	1/1:0,35:35:99:1583,99,0	1/1:0,17:17:51.17:815,51,0	1/1:0,20:20:60.15:905,60,0	1/1:0,24:24:69.24:1103,69,0	1/1:0,44:44:99:1871,117,0	1/1:0,13:13:33.11:527,33,0	0/0:23,0:23:69.23:0,69,965	0/0:23,0:23:63.15:0,63,842	1/1:1,18:19:54.18:863,54,0	1/1:0,34:34:99:1558,99,0	1/1:0,31:31:84.29:1342,84,0	1/1:0,10:10:30.10:479,30,0
chr10	64513152	.	TC	T	290.41	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.953;DP=715;FS=6.361;HRun=1;HaplotypeScore=119.5903;InbreedingCoeff=0.9978;MQ=88.63;MQ0=0;MQRankSum=-4.912;QD=16.13;ReadPosRankSum=-1.699;VQSLOD=3.0695;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,123,1959	0/0:8,0:8:24.08:0,24,384	0/0:33,0:33:99:0,99,1537	0/0:23,0:23:69.17:0,69,1048	1/1:3,14:18:50.64:385,51,0	0/0:23,0:23:69.24:0,69,1103	0/0:39,0:39:99:0,117,1814	0/0:35,0:35:99:0,102,1588	0/0:28,0:28:84.27:0,84,1317	0/0:23,0:23:69.22:0,69,1081	0/0:19,0:19:54.18:0,54,862	0/0:21,0:21:60.20:0,60,959	0/0:22,0:22:66.23:0,66,1055	0/0:29,0:29:87.28:0,87,1361	0/0:30,0:30:90.31:0,90,1439	0/0:24,0:24:72.25:0,72,1150	0/0:35,0:35:99:0,102,1618	0/0:16,0:16:48:0,48,682	0/0:29,0:29:87.30:0,87,1381	0/0:23,0:23:69.24:0,69,1100	0/0:38,0:38:99:0,114,1798	0/0:28,0:28:81.27:0,81,1277	0/0:24,0:24:69.24:0,69,1098	0/0:33,0:33:93.30:0,93,1462	0/0:14,0:14:42.14:0,42,668	0/0:22,0:22:66.23:0,66,1054	0/0:23,0:23:69.24:0,69,1102	0/0:13,0:13:36.12:0,36,575
chr10	64513154	.	TC	T	261.26	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.986;DP=717;FS=6.877;HRun=1;HaplotypeScore=121.4306;InbreedingCoeff=0.9978;MQ=89.06;MQ0=0;MQRankSum=-4.652;QD=15.37;ReadPosRankSum=-1.507;VQSLOD=2.8457;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,117,1868	0/0:8,0:8:24.08:0,24,383	0/0:33,0:33:99:0,99,1508	0/0:24,0:24:72.22:0,72,1106	1/1:3,14:17:47.60:356,48,0	0/0:23,0:23:69.20:0,69,1075	0/0:35,0:35:99:0,105,1628	0/0:36,0:36:99:0,105,1582	0/0:28,0:28:84.23:0,84,1268	0/0:25,0:25:72.24:0,72,1123	0/0:20,0:20:60.19:0,60,928	0/0:20,0:20:60.20:0,60,958	0/0:25,0:25:72.24:0,72,1132	0/0:28,0:28:84.29:0,84,1339	0/0:30,0:30:90.31:0,90,1437	0/0:25,0:25:75.22:0,75,1170	0/0:34,0:34:99:0,99,1524	0/0:16,0:16:48.16:0,48,763	0/0:30,0:30:87.27:0,87,1343	0/0:24,0:24:72.25:0,72,1140	0/0:39,0:39:99:0,117,1842	0/0:27,0:27:81.26:0,81,1261	0/0:23,0:23:66.23:0,66,1054	0/0:34,0:34:96.28:0,96,1484	0/0:13,0:13:39.12:0,39,600	0/0:23,0:23:66.23:0,66,1054	0/0:24,0:24:72.22:0,72,1095	0/0:13,0:13:36.12:0,36,575
chr10	64513596	.	TTG	T	10889.79	PASS	AB=0.917;AC=45;AF=0.804;AN=56;BaseQRankSum=5.660;DP=995;FS=0.418;HRun=0;HaplotypeScore=99.3831;InbreedingCoeff=0.8444;MQ=53.26;MQ0=44;MQRankSum=4.722;QD=17.62;ReadPosRankSum=4.746;VQSLOD=4.7670;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:17,32:50:63.17:756,63,0	1/1:3,3:7:6.02:70,6,0	0/0:138,0:25:35.27:0,35,450	0/0:148,0:37:46.50:0,47,613	0/1:10,1:11:14.51:15,0,261	1/1:6,16:22:27.08:324,27,0	1/1:9,29:41:59.85:675,60,0	1/1:19,18:37:60.16:700,60,0	1/1:7,21:28:54.12:631,54,0	1/1:3,19:23:62.75:720,63,0	1/1:5,13:20:35.61:388,36,0	1/1:4,21:25:47.94:575,48,0	0/0:27,0:27:27.24:0,27,911	1/1:8,25:33:50.94:573,51,0	1/1:10,30:40:46.60:703,47,0	1/1:3,13:17:24.07:288,24,0	1/1:5,21:25:48.15:575,48,0	1/1:8,10:19:23.20:243,23,0	1/1:9,9:17:18.05:214,18,0	1/1:8,13:21:35.91:352,36,0	1/1:17,56:71:99:1165,99,0	1/1:5,13:17:26.95:270,27,0	0/0:16,0:17:48.15:0,48,728	0/0:39,6:45:21.37:0,21,1280	1/1:3,11:16:18.06:216,18,0	1/1:6,24:31:68.94:770,69,0	1/1:9,20:33:56.49:596,56,0	1/1:3,3:6:6.02:72,6,0
chr10	64514127	.	AAG	A	118.51	PASS	AB=0.942;AC=8;AF=0.167;AN=48;BaseQRankSum=1.068;DP=635;FS=2.481;HRun=0;HaplotypeScore=122.0243;InbreedingCoeff=0.1649;MQ=53.50;MQ0=19;MQRankSum=0.907;QD=0.90;ReadPosRankSum=1.030;VQSLOD=2.4923;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:34:16.66:0,17,138	0/0:14,0:13:0.87:0,1,2	./.	./.	0/1:22,0:17:0:0,0,0	0/0:26,0:22:8.21:0,8,54	0/0:25,0:24:4.98:0,5,35	0/0:29,0:27:0.94:0,1,1	0/0:26,0:25:5.14:0,5,44	0/0:26,0:24:14.84:0,15,122	1/1:17,0:17:4.07:17,4,0	1/1:20,0:19:3.86:13,4,0	0/1:21,1:21:58.70:59,0,182	0/0:12,0:10:0.94:0,1,2	./.	./.	0/0:22,0:20:5.09:0,5,31	0/0:22,0:22:2.28:0,2,73	0/0:27,0:22:5.34:0,5,120	0/0:25,0:24:7.17:0,7,32	0/0:17,0:14:1.84:0,2,14	0/0:19,0:16:2.84:0,3,14	0/1:18,2:18:31.46:41,0,31	0/1:28,1:27:42.98:97,0,43	0/0:17,0:16:3.49:0,3,27	0/0:28,0:25:6.48:0,6,60	0/0:13,0:12:5.56:0,6,30	0/0:8,0:8:0.47:0,0,1
chr10	64514197	.	CAG	C	1066.61	PASS	AB=0.868;AC=14;AF=0.292;AN=48;BaseQRankSum=5.359;DP=643;FS=12.369;HRun=0;HaplotypeScore=122.8658;InbreedingCoeff=0.0765;MQ=32.53;MQ0=67;MQRankSum=-8.442;QD=3.82;ReadPosRankSum=-0.786;VQSLOD=2.1018;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:46:63.17:0,63,994	0/0:6,0:5:0:0,0,0	0/0:9,0:1:3.01:0,3,43	./.	0/0:22,0:17:24.08:0,24,402	0/1:14,1:18:0.96:1,0,6	0/1:25,1:17:0:0,0,0	0/0:28,0:14:33.08:0,33,485	0/0:17,0:14:30.01:0,30,480	0/1:17,15:31:99:498,0,139	./.	0/0:13,1:13:0.47:0,0,2	0/0:27,0:22:43.39:0,43,686	1/1:12,6:18:2.22:7,2,0	./.	0/1:14,6:22:21.91:32,0,22	0/1:17,1:13:28.39:30,0,28	0/0:10,0:10:10.89:0,11,73	0/1:21,2:13:75.23:75,0,81	0/0:17,7:26:7.96:0,8,118	./.	1/1:14,7:24:1.24:3,1,0	0/0:16,0:14:21.07:0,21,348	0/0:51,0:39:66.64:0,67,993	0/1:11,2:15:0:0,0,0	0/1:14,12:26:80.85:455,0,81	0/1:5,4:17:55.05:55,0,92	0/1:9,1:8:0.94:31,0,1
chr10	64514203	.	GAGAGAGAC	G	1012.36	PASS	AB=0.969;AC=21;AF=0.438;AN=48;BaseQRankSum=4.415;DP=656;FS=2.443;HRun=0;HaplotypeScore=150.6496;InbreedingCoeff=0.2142;MQ=32.54;MQ0=64;MQRankSum=-7.101;QD=3.08;ReadPosRankSum=-2.936;VQSLOD=1.9145;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:45:72.11:0,72,2379	1/1:5,0:4:0.47:1,0,0	0/0:5,0:1:2.98:0,3,21	./.	0/0:23,0:19:24.08:0,24,939	1/1:19,2:18:5.77:141,6,0	0/1:21,5:17:0.08:0,0,0	0/0:32,0:16:39.11:0,39,737	0/0:18,0:13:30.03:0,30,886	0/1:38,0:32:56.76:57,0,779	./.	1/1:15,4:15:6.49:134,6,0	0/0:28,0:24:43.15:0,43,1543	1/1:19,1:16:5.51:68,6,0	1/1:20,0:16:3.01:44,3,0	0/1:23,0:19:87.83:99,0,88	1/1:20,0:13:6.31:55,6,0	0/1:14,0:11:0.97:43,0,1	0/1:25,3:13:99:312,0,267	0/1:34,0:26:30.99:31,0,206	./.	./.	0/0:17,0:15:24.08:0,24,729	0/0:51,0:39:70.73:0,71,2237	0/1:15,0:13:0:0,0,0	0/1:33,1:30:99:138,0,807	0/0:23,0:20:9.06:0,9,213	0/1:11,0:8:34.95:35,0,96
chr10	64514211	.	C	CAG	1592.03	PASS	AB=0.854;AC=19;AF=0.396;AN=48;BaseQRankSum=5.647;DP=673;FS=0.595;HRun=0;HaplotypeScore=128.2789;InbreedingCoeff=0.0788;MQ=32.17;MQ0=58;MQRankSum=-8.037;QD=4.57;ReadPosRankSum=-3.402;VQSLOD=2.1601;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:59,0:46:75.24:0,75,967	0/1:3,1:2:0:0,0,0	./.	./.	0/0:28,0:24:24.03:0,24,296	1/1:19,5:19:1.73:71,2,0	0/1:25,0:14:0:0,0,0	0/0:31,0:12:33.03:0,33,386	0/0:17,0:12:24.08:0,24,312	0/1:31,4:31:99:331,0,499	./.	0/1:16,6:16:21.39:69,0,21	0/0:29,2:27:56.88:0,57,701	1/1:16,3:15:3.01:46,3,0	1/1:10,9:16:2.50:9,2,0	0/1:19,6:21:51.55:111,0,52	0/1:19,1:14:0.32:14,0,0	1/1:11,2:9:7.53:66,8,0	0/1:28,3:17:99:309,0,104	0/0:33,1:27:8.44:0,8,84	0/0:21,1:11:0:0,0,0	0/1:23,8:28:4.41:4,0,14	0/0:15,0:14:23.08:0,23,278	0/0:50,1:42:75.22:0,75,953	./.	0/1:35,9:37:99:481,0,462	0/1:14,11:22:88.02:126,0,88	0/1:9,1:8:55.83:92,0,56
chr10	64514231	.	GAC	G	300.77	PASS	AB=0.966;AC=14;AF=0.292;AN=48;BaseQRankSum=5.731;DP=771;FS=9.089;HRun=0;HaplotypeScore=138.5648;InbreedingCoeff=-0.1212;MQ=30.78;MQ0=62;MQRankSum=-5.793;QD=0.79;ReadPosRankSum=-4.290;VQSLOD=-0.2107;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:75,0:57:90.24:0,90,1585	./.	./.	./.	0/0:23,1:21:21.07:0,21,394	0/1:30,1:24:1.14:1,0,96	0/1:34,0:19:0.01:0,0,0	0/0:31,0:11:30.02:0,30,482	0/0:19,0:15:21.04:0,21,370	0/1:32,1:27:42.22:42,0,996	./.	0/1:26,2:19:26.85:27,0,46	0/0:32,0:29:59.42:0,59,1034	1/1:21,2:17:5.94:44,6,0	0/1:23,1:19:35.74:36,0,46	0/1:27,1:21:3.20:3,0,203	0/1:24,1:17:27.29:27,0,41	0/1:16,0:10:44.57:52,0,45	0/1:37,0:26:55.52:56,0,524	0/0:28,1:23:2.86:0,3,57	0/0:30,0:17:3.01:0,3,42	0/0:31,0:27:2.64:0,3,57	0/0:20,0:20:33.06:0,33,564	0/0:58,0:45:81.15:0,81,1474	0/1:15,0:11:0.04:0,0,0	0/1:49,5:46:96.83:97,0,1571	0/1:28,3:27:46.85:47,0,393	0/0:16,1:12:23.65:0,24,267
chr10	64514261	.	CAGAGAG	C	1118.34	PASS	AB=0.837;AC=12;AF=0.250;AN=48;BaseQRankSum=1.296;DP=707;FS=18.044;HRun=0;HaplotypeScore=132.5576;InbreedingCoeff=-0.0978;MQ=30.09;MQ0=70;MQRankSum=-5.242;QD=3.69;ReadPosRankSum=-0.490;VQSLOD=1.5197;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:59,0:46:51.62:0,52,1333	./.	./.	./.	./.	0/1:18,10:22:42.76:43,0,112	0/1:33,2:17:0.38:0,0,0	0/0:32,0:5:6.02:0,6,97	0/0:22,0:17:16.28:0,16,159	0/1:24,3:21:99:139,0,326	0/1:12,5:13:0:0,0,0	0/0:18,4:15:8.93:0,9,96	0/0:29,0:25:51.18:0,51,1328	0/0:20,1:14:3.01:0,3,66	1/1:15,9:19:3.01:66,3,0	0/1:18,11:24:53.81:54,0,108	0/1:27,2:22:30.31:30,0,219	0/0:17,0:11:22.08:0,22,135	0/1:18,4:12:99:174,0,236	0/0:15,5:18:5.24:0,5,118	0/0:31,0:17:3.01:0,3,68	0/0:24,7:25:0.93:0,1,48	0/0:24,0:24:39.13:0,39,1143	0/0:56,0:46:78.21:0,78,1887	0/0:12,1:8:0:0,0,0	0/1:38,8:40:99:534,0,524	0/1:24,3:25:41.16:41,0,227	0/1:13,4:15:82.83:163,0,83
chr10	64514303	.	GAGAC	G	158.09	PASS	AB=0.980;AC=11;AF=0.239;AN=46;BaseQRankSum=2.547;DP=642;FS=6.345;HRun=0;HaplotypeScore=101.1783;InbreedingCoeff=0.2667;MQ=29.23;MQ0=54;MQRankSum=-1.302;QD=0.68;ReadPosRankSum=-3.765;VQSLOD=0.5156;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:39,2:27:15.01:170,15,0	0/0:10,1:8:1.25:0,1,3	./.	./.	0/0:10,0:10:0.31:0,0,44	0/0:23,1:21:3.29:0,3,19	0/1:34,0:17:9.75:10,0,32	1/1:13,0:1:2.68:11,3,0	0/0:20,0:17:8.88:0,9,125	0/1:30,1:26:7.51:8,0,730	0/1:23,1:17:0:0,0,0	0/0:16,1:12:6.02:0,6,109	0/0:27,0:25:43.89:0,44,1106	0/0:21,0:18:3.41:0,3,19	0/1:25,1:21:0:0,0,0	0/0:32,0:27:15.02:0,15,242	0/0:24,0:17:7.62:0,8,96	0/0:16,0:11:16.78:0,17,178	0/0:31,0:14:23.28:0,23,328	0/1:21,0:21:0:0,0,0	./.	./.	0/0:23,0:21:48.11:0,48,1049	0/0:50,0:39:79.24:0,79,1716	./.	0/0:34,1:28:21.79:0,22,682	0/1:29,1:24:70.52:71,0,143	0/1:13,0:11:0.03:0,0,18
chr10	64514317	.	C	CAG	39.67	PASS	AB=1.000;AC=8;AF=0.200;AN=40;BaseQRankSum=2.943;DP=514;FS=4.957;HRun=0;HaplotypeScore=67.9932;InbreedingCoeff=0.0778;MQ=30.00;MQ0=55;MQRankSum=-2.893;QD=0.32;ReadPosRankSum=-1.869;VQSLOD=1.0266;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/1:9,0:7:9.10:9,0,19	./.	./.	0/0:10,0:10:18.04:0,18,211	0/0:14,0:11:2.50:0,2,9	0/0:27,0:11:2.24:0,2,26	1/1:17,3:2:6.02:89,6,0	0/0:10,10:18:3:0,3,25	0/1:21,0:20:11.10:11,0,259	0/0:16,0:12:0:0,0,1	0/0:14,0:11:1.26:0,1,32	0/0:22,0:21:45.14:0,45,552	./.	./.	0/0:26,0:24:9.01:0,9,89	0/1:16,0:11:9.94:10,0,28	0/1:11,0:9:5.69:6,0,67	0/0:26,0:9:14.88:0,15,124	./.	0/1:14,0:7:0:0,0,0	./.	0/0:15,0:13:33.08:0,33,398	0/0:42,0:36:68.08:0,68,846	./.	0/1:29,0:20:20.27:20,0,246	0/0:20,0:14:11.44:0,11,98	0/0:13,0:12:0:0,0,0
chr10	64514321	.	G	GAC	47.40	PASS	AB=0.964;AC=8;AF=0.182;AN=44;BaseQRankSum=1.416;DP=535;FS=6.135;HRun=0;HaplotypeScore=71.1262;InbreedingCoeff=0.0787;MQ=30.56;MQ0=57;MQRankSum=-3.279;QD=0.31;ReadPosRankSum=-1.429;VQSLOD=0.4494;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:9,0:7:1.15:0,1,37	./.	./.	0/0:14,0:13:18.06:0,18,273	0/0:16,0:13:3:0,3,27	0/0:24,3:12:5.93:0,6,59	1/1:22,0:2:5.95:48,6,0	0/0:20,0:17:3.01:0,3,41	0/1:24,1:22:39.42:39,0,526	0/0:15,2:12:2.99:0,3,24	0/0:17,0:13:5.80:0,6,50	0/0:22,0:21:56.95:0,57,765	0/1:20,0:17:0.01:0,0,0	./.	0/0:27,1:25:11.97:0,12,141	0/1:15,2:12:7.03:7,0,59	0/1:13,0:10:2.09:2,0,141	0/1:27,0:9:1.94:2,0,183	0/0:12,2:14:0:0,0,0	0/0:15,0:8:5.96:0,6,42	./.	0/0:18,0:15:36.11:0,36,526	0/0:41,0:36:80.31:0,80,1142	./.	0/1:28,1:20:52.48:52,0,504	0/0:21,0:15:13.50:0,13,107	0/0:18,1:15:11.90:0,12,86
chr10	64514347	.	CAG	C	799.45	PASS	AB=0.973;AC=19;AF=0.413;AN=46;BaseQRankSum=2.598;DP=627;FS=4.425;HRun=0;HaplotypeScore=77.2456;InbreedingCoeff=0.0806;MQ=34.84;MQ0=40;MQRankSum=-3.695;QD=2.48;ReadPosRankSum=-3.927;VQSLOD=0.2885;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:28,9:21:3.01:38,3,0	1/1:7,1:7:1.66:5,2,0	./.	./.	0/0:29,0:26:42.14:0,42,709	0/0:19,0:16:0.50:0,1,1	./.	1/1:15,14:9:17.99:202,18,0	0/0:22,0:19:17.87:0,18,274	0/1:32,0:29:67.69:183,0,68	0/1:19,0:17:11.43:23,0,11	0/1:22,0:17:0.17:0,0,12	0/0:22,0:22:51.16:0,51,819	0/0:25,0:20:0.43:0,0,1	./.	1/1:23,8:30:12.77:123,13,0	0/1:15,1:13:28.81:29,0,51	0/1:15,0:13:6.12:6,0,100	0/1:14,3:8:8.48:63,0,8	0/0:21,0:20:0:0,0,0	0/0:21,0:14:2.59:0,3,21	./.	0/0:16,0:13:26.96:0,27,399	0/0:48,1:44:84.24:0,84,1349	1/1:19,0:19:2.90:16,3,0	0/1:30,0:24:32.20:216,0,32	0/1:23,0:18:21.16:21,0,78	0/1:19,0:16:11.25:11,0,15
chr10	64514349	.	G	GAGAC	4598.29	PASS	AB=0.753;AC=28;AF=0.609;AN=46;BaseQRankSum=-0.989;DP=662;FS=3.682;HRun=0;HaplotypeScore=78.8506;InbreedingCoeff=0.2549;MQ=35.62;MQ0=39;MQRankSum=-6.210;QD=11.11;ReadPosRankSum=-2.755;VQSLOD=3.3873;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:38,0:21:3.01:38,3,0	1/1:5,3:7:3.90:82,4,0	./.	./.	0/0:30,0:27:42.14:0,42,785	1/1:7,13:17:3.01:81,3,0	./.	1/1:31,0:11:11.14:78,11,0	0/0:24,0:20:18.77:0,19,291	1/1:8,23:30:30.98:1363,31,0	1/1:5,13:17:9.03:242,9,0	0/1:8,15:19:18.79:74,0,19	0/0:21,0:21:54.04:0,54,945	1/1:9,16:23:0.89:2,1,0	./.	1/1:21,13:31:15.05:280,15,0	0/1:16,0:13:43.84:46,0,44	0/1:8,8:14:95.79:226,0,96	0/1:19,1:9:12.71:229,0,13	0/0:3,18:20:0:0,0,0	0/1:10,12:17:50.88:75,0,51	./.	0/0:18,0:15:30.08:0,30,484	0/0:49,0:44:87.24:0,87,1527	1/1:4,17:21:3.01:80,3,0	1/1:9,21:25:58.98:1218,59,0	0/1:13,12:21:26.24:93,0,26	1/1:5,15:19:4.50:391,5,0
chr10	64514399	.	CAG	C	700.81	PASS	AB=0.963;AC=5;AF=0.093;AN=54;BaseQRankSum=0.730;DP=721;FS=5.981;HRun=0;HaplotypeScore=112.4826;InbreedingCoeff=0.5238;MQ=40.62;MQ0=47;MQRankSum=-5.441;QD=6.61;ReadPosRankSum=-3.430;VQSLOD=2.1492;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:27,17:28:18.06:222,18,0	0/0:12,0:11:13.25:0,13,179	./.	0/0:17,0:1:2.74:0,3,12	0/0:22,0:21:5.93:0,6,16	0/0:20,0:17:14.95:0,15,243	0/0:23,0:16:9.03:0,9,150	1/1:17,19:21:53.08:570,53,0	0/0:23,0:20:38.86:0,39,640	0/0:29,0:24:57.14:0,57,884	0/0:18,0:17:22.32:0,22,347	0/0:30,0:25:30.10:0,30,495	0/0:24,0:23:46.38:0,46,895	0/0:27,0:21:17.92:0,18,215	0/0:35,0:28:21.06:0,21,326	0/0:34,0:29:23.84:0,24,496	0/1:25,1:22:34.36:34,0,374	0/0:19,0:17:33:0,33,456	0/0:21,0:15:0.68:0,1,361	0/0:21,0:16:6.02:0,6,100	0/0:41,0:36:33.11:0,33,540	0/0:27,0:25:3.01:0,3,50	0/0:18,0:16:39.11:0,39,597	0/0:52,0:49:99:0,102,1636	0/0:19,0:14:9.03:0,9,151	0/0:25,0:21:37:0,37,719	0/0:17,0:15:16.60:0,17,269	0/0:25,0:22:36.12:0,36,585
chr10	64514445	.	CAGAG	C	4705.35	PASS	AB=1.000;AC=38;AF=0.679;AN=56;BaseQRankSum=9.375;DP=758;FS=10.022;HRun=0;HaplotypeScore=193.4733;InbreedingCoeff=0.8801;MQ=43.56;MQ0=29;MQRankSum=4.051;QD=9.12;ReadPosRankSum=4.149;VQSLOD=3.2129;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:40:57.67:0,58,1337	1/1:17,0:17:20.99:184,21,0	0/0:11,0:2:6.02:0,6,126	0/0:29,0:5:9.03:0,9,191	0/1:15,0:15:0.15:0,0,1	1/1:23,0:22:17.66:154,18,0	0/1:24,0:18:0.10:63,0,0	0/0:44,0:26:54.64:0,55,1249	0/0:21,0:20:39.03:0,39,867	1/1:22,0:21:25.07:260,25,0	1/1:18,1:19:16.16:155,16,0	1/1:29,0:27:29.40:338,29,0	0/0:29,0:27:76.78:0,77,1771	1/1:27,0:26:23.05:182,23,0	1/1:41,1:39:38.46:321,38,0	1/1:36,0:33:26.16:223,26,0	1/1:37,0:34:40.05:434,40,0	1/1:19,0:18:33.04:242,33,0	1/1:26,0:15:24.08:216,24,0	1/1:25,3:25:38.58:279,39,0	1/1:33,0:32:53.39:420,53,0	1/1:21,2:19:8.49:46,8,0	0/0:20,0:20:39.07:0,39,891	0/0:45,0:43:99:0,105,2496	1/1:16,0:13:17.53:134,18,0	1/1:35,1:34:13.85:475,14,0	1/1:18,0:18:21:227,21,0	1/1:23,2:21:38.66:353,39,0
chr10	64514463	.	GAGAC	G	4848.67	PASS	AB=0.917;AC=35;AF=0.625;AN=56;BaseQRankSum=10.742;DP=841;FS=4.248;HRun=0;HaplotypeScore=224.3845;InbreedingCoeff=0.6774;MQ=54.41;MQ0=21;MQRankSum=2.131;QD=9.56;ReadPosRankSum=5.170;VQSLOD=3.9808;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:42:72.20:0,72,1666	1/1:15,3:18:17.15:149,17,0	0/0:54,0:19:26.97:0,27,498	0/0:77,1:26:25.69:0,26,469	0/1:9,6:15:0.15:0,0,1	0/1:21,1:21:1.13:94,0,1	1/1:23,2:19:0.46:98,0,0	0/0:47,0:27:72.21:0,72,1636	0/0:17,0:17:34.52:0,35,950	1/1:21,3:23:37.93:483,38,0	1/1:14,1:15:13.06:92,13,0	1/1:27,1:26:6.54:200,7,0	0/0:27,0:25:74.97:0,75,1739	1/1:24,0:24:20.69:176,21,0	0/1:38,1:38:0.43:177,0,0	1/1:35,2:35:21.72:242,22,0	1/1:33,0:32:48.87:390,49,0	0/1:19,0:19:63.38:301,0,63	1/1:15,0:10:15.84:119,16,0	1/1:31,2:30:53.31:527,53,0	1/1:30,1:30:39.52:436,40,0	1/1:27,0:23:16.45:115,16,0	0/0:19,0:18:45.15:0,45,1189	0/0:44,0:43:99:0,105,2601	1/1:12,4:14:17.38:116,17,0	1/1:39,1:40:23.76:767,24,0	0/1:15,1:15:8.79:56,0,9	1/1:29,1:27:11.07:311,11,0
chr10	64514467	.	C	CAGAG	11521.66	PASS	AB=1.000;AC=37;AF=0.661;AN=56;BaseQRankSum=10.784;DP=865;FS=1.179;HRun=0;HaplotypeScore=209.1923;InbreedingCoeff=0.8826;MQ=54.84;MQ0=21;MQRankSum=-0.366;QD=23.28;ReadPosRankSum=4.777;VQSLOD=4.7257;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:42:65.86:0,66,1107	1/1:18,0:18:24.32:342,24,0	0/0:60,0:22:32.01:0,32,487	0/0:89,0:28:23.10:0,23,349	0/0:15,0:15:2.26:0,2,15	1/1:23,0:22:18.04:247,18,0	1/1:26,1:21:17.94:234,18,0	0/0:49,0:29:78.16:0,78,1177	0/0:19,0:19:37.53:0,38,634	1/1:25,0:24:66.08:1016,66,0	1/1:16,0:16:15.05:235,15,0	1/1:27,1:26:38.99:528,39,0	0/0:28,0:26:63.19:0,63,1086	1/1:24,1:25:36.05:488,36,0	1/1:34,1:35:33.10:468,33,0	1/1:36,1:35:50.89:610,51,0	1/1:33,1:33:77.53:1077,78,0	0/1:19,0:19:17.98:672,0,18	1/1:18,0:15:27.50:387,28,0	1/1:34,0:31:57.18:871,57,0	1/1:29,1:29:63.19:1018,63,0	1/1:27,0:23:17.20:237,17,0	0/0:21,0:20:44.81:0,45,779	0/0:42,0:41:96.29:0,96,1656	1/1:15,0:14:18:284,18,0	1/1:41,1:42:99:1630,108,0	1/1:15,0:14:24.02:288,24,0	1/1:26,1:24:60.14:891,60,0
chr10	64514516	.	A	AATGGATGGATGGATGG	929.59	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-0.936;DP=842;FS=1.596;HRun=0;HaplotypeScore=376.8674;InbreedingCoeff=0.9749;MQ=58.38;MQ0=1;MQRankSum=-2.140;QD=28.17;ReadPosRankSum=-2.639;VQSLOD=0.9589;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:60.18:0,60,2077	0/0:11,0:11:23.97:0,24,615	0/0:23,0:22:21.05:0,21,412	0/0:47,0:37:32.84:0,33,841	1/1:18,8:33:14.91:1018,15,0	0/0:31,0:31:51.09:0,51,1800	0/0:26,0:22:39.10:0,39,1156	0/0:44,0:43:78.16:0,78,1943	0/0:26,0:26:60.14:0,60,2153	0/0:40,0:39:66.23:0,66,2540	0/0:17,0:17:35.98:0,36,819	0/0:30,0:28:54.18:0,54,1916	0/0:20,0:20:42.09:0,42,1293	0/0:19,0:19:27.04:0,27,756	0/0:45,0:45:69.18:0,69,2456	0/0:31,0:31:48.16:0,48,1513	0/0:26,0:26:48.11:0,48,1745	0/0:14,0:14:27.09:0,27,1106	0/0:28,0:26:53.87:0,54,1514	0/0:34,0:34:66.22:0,66,2356	0/0:40,0:40:87.05:0,87,2672	0/0:25,0:25:45.09:0,45,1109	0/0:25,0:25:45.15:0,45,1573	0/0:31,0:30:63.22:0,63,2696	0/0:22,0:22:48.16:0,48,1478	0/0:47,0:47:90.28:0,90,3293	0/0:26,0:26:45.15:0,45,1771	0/0:38,0:38:81.28:0,81,3012
chr10	64516105	.	A	AACCAAGGC	35978.36	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=-10.154;DP=650;FS=3.653;HRun=0;HaplotypeScore=143.8010;InbreedingCoeff=0.9795;MQ=84.82;MQ0=0;MQRankSum=-16.905;QD=79.60;ReadPosRankSum=-2.019;VQSLOD=4.8916;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,132,3209	1/1:2,6:9:21.07:890,21,0	0/0:29,0:29:50.94:0,51,1203	0/0:27,0:27:47.85:0,48,1242	1/1:13,16:31:63.22:2462,63,0	1/1:6,12:19:39.13:1592,39,0	1/1:12,16:28:51.17:2155,51,0	1/1:20,6:27:45.15:1646,45,0	0/0:24,0:24:72.25:0,72,1930	1/1:11,15:28:54.19:2203,54,0	1/1:7,20:29:66.23:2550,66,0	1/1:7,8:16:33.11:1310,33,0	0/0:19,0:19:48.15:0,48,1194	1/1:5,18:26:57.20:2379,57,0	1/1:6,19:26:57.20:2387,57,0	1/1:8,11:18:39.13:1596,39,0	1/1:9,15:26:48.16:1787,48,0	1/1:5,11:16:42.14:1745,42,0	1/1:14,5:20:33.09:1187,33,0	1/1:12,13:26:42.10:1542,42,0	1/1:8,4:14:21.07:825,21,0	1/1:5,14:20:51.18:2025,51,0	0/0:24,0:24:57.20:0,57,1494	0/0:24,0:24:69.24:0,69,1782	1/1:5,10:16:33.11:1376,33,0	1/1:10,17:28:63.22:2488,63,0	1/1:7,13:21:39.13:1607,39,0	1/1:3,4:7:6.02:225,6,0
chr10	64517479	.	AGTGTGTGT	A	1984.25	PASS	AB=0.962;AC=33;AF=0.750;AN=44;BaseQRankSum=5.376;DP=501;FS=12.886;HRun=0;HaplotypeScore=121.9702;InbreedingCoeff=0.4366;MQ=60.20;MQ0=16;MQRankSum=-4.586;QD=6.28;ReadPosRankSum=-2.029;VQSLOD=1.4868;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:26:2.98:23,3,0	0/0:11,0:11:0.94:0,1,1	./.	./.	./.	1/1:14,4:17:9.03:222,9,0	0/1:24,1:22:19.33:68,0,19	./.	1/1:13,4:19:12.04:248,12,0	1/1:8,4:12:6:98,6,0	1/1:17,5:21:3.01:74,3,0	1/1:8,1:10:5.91:89,6,0	0/0:17,0:16:21.07:0,21,685	1/1:16,1:22:5.73:130,6,0	1/1:11,3:14:6.02:148,6,0	1/1:8,3:10:6.49:149,6,0	1/1:41,2:43:3:74,3,0	1/1:16,5:22:7.85:202,8,0	./.	1/1:6,2:8:3.01:74,3,0	0/0:32,0:32:2.96:0,3,19	./.	0/0:9,0:9:9.03:0,9,313	0/0:26,0:28:33.11:0,33,1009	1/1:13,1:15:9.03:161,9,0	1/1:11,4:13:5.75:86,6,0	1/1:17,3:20:9:203,9,0	1/1:9,4:12:3.01:74,3,0
chr10	64521781	.	C	CT	21263.48	PASS	AB=0.762;AC=54;AF=0.964;AN=56;BaseQRankSum=-3.023;DP=576;FS=0.000;HRun=1;HaplotypeScore=168.2482;InbreedingCoeff=-0.0368;MQ=73.96;MQ0=0;MQRankSum=-4.394;QD=36.92;ReadPosRankSum=3.439;VQSLOD=4.3496;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,24:25:54.14:784,54,0	1/1:0,8:9:27.09:400,27,0	0/1:13,7:20:86.37:322,0,86	0/1:13,5:17:17.54:307,0,18	1/1:3,22:25:63.11:873,63,0	1/1:0,22:22:63.13:892,63,0	1/1:2,25:27:69.19:1008,69,0	1/1:2,24:26:75.22:1099,75,0	1/1:1,20:21:51.17:764,51,0	1/1:3,13:16:45.12:650,45,0	1/1:1,25:26:72.24:1078,72,0	1/1:1,13:14:33.08:469,33,0	1/1:1,10:11:30.10:449,30,0	1/1:1,25:26:69.19:996,69,0	1/1:0,17:17:51.17:763,51,0	1/1:1,28:29:75.20:1092,75,0	1/1:1,21:22:48.16:718,48,0	1/1:1,20:21:54.18:808,54,0	1/1:2,15:16:36.75:620,37,0	1/1:2,21:23:60.20:898,60,0	1/1:0,16:16:42.14:623,42,0	1/1:1,22:23:60.12:848,60,0	1/1:1,17:18:48.16:713,48,0	1/1:1,18:20:48.10:703,48,0	1/1:0,27:27:78.26:1168,78,0	1/1:2,17:19:54.15:784,54,0	1/1:2,26:27:69.23:1032,69,0	1/1:2,8:10:30.02:400,30,0
chr10	64521887	.	AG	A	4572.39	PASS	AB=0.650;AC=43;AF=0.768;AN=56;BaseQRankSum=7.168;DP=628;FS=21.979;HRun=2;HaplotypeScore=211.9489;InbreedingCoeff=0.7512;MQ=65.42;MQ0=44;MQRankSum=-7.301;QD=13.45;ReadPosRankSum=-1.363;VQSLOD=1.9547;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,3:11:14.16:132,14,0	1/1:9,0:9:23.90:260,24,0	0/0:100,1:40:58.19:0,58,710	0/0:109,2:38:36.29:0,36,616	1/1:21,1:19:4.78:59,5,0	1/1:15,5:19:29.16:385,29,0	0/1:6,7:8:0.94:16,0,1	1/1:15,2:14:8.61:285,9,0	0/0:19,0:20:25:0,25,118	1/1:12,1:12:17.10:319,17,0	1/1:12,3:14:11.74:157,12,0	1/1:13,2:13:19.34:231,19,0	0/0:14,0:14:36.08:0,36,500	1/1:18,4:21:8:203,8,0	1/1:18,3:20:11.53:210,12,0	1/1:15,4:16:29.23:367,29,0	1/1:3,6:9:8.30:142,8,0	1/1:9,0:7:6.01:63,6,0	1/1:17,1:15:9.63:389,10,0	1/1:15,7:21:12.01:147,12,0	1/1:1,8:7:6.02:73,6,0	1/1:10,4:13:3:57,3,0	0/0:16,0:15:44.16:0,44,578	0/0:24,1:25:57.16:0,57,812	1/1:10,0:10:4.18:65,4,0	1/1:17,7:22:59.89:652,60,0	1/1:15,0:14:12.79:141,13,0	1/1:8,3:10:9.93:220,10,0
chr10	64521888	.	G	GA	5418.35	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=8.635;DP=623;FS=8.778;HRun=1;HaplotypeScore=208.4613;InbreedingCoeff=0.8541;MQ=63.97;MQ0=44;MQRankSum=-8.562;QD=16.37;ReadPosRankSum=-1.787;VQSLOD=3.4661;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,6:11:14.53:161,15,0	1/1:3,5:8:24.06:300,24,0	0/0:105,0:39:56.88:0,57,704	0/0:110,0:37:36.98:0,37,624	1/1:10,12:19:6.61:92,7,0	1/1:13,6:19:36.93:399,37,0	1/1:11,2:8:5.02:28,5,0	1/1:5,9:11:12.05:324,12,0	0/0:4,0:20:41.25:0,41,285	1/1:4,9:12:30.68:462,31,0	1/1:11,5:15:17.55:179,18,0	1/1:6,8:12:25.36:266,25,0	0/0:14,0:14:36.08:0,36,471	1/1:13,9:21:29.89:259,30,0	1/1:12,9:20:22.60:236,23,0	1/1:12,7:16:35.19:402,35,0	1/1:8,1:9:14.07:154,14,0	1/1:1,9:8:6.02:86,6,0	1/1:8,11:15:13.61:458,14,0	1/1:12,7:18:12.02:152,12,0	1/1:8,0:6:6.02:73,6,0	1/1:11,3:13:7.93:78,8,0	0/0:16,0:15:45.05:0,45,561	0/0:23,2:25:57.16:0,57,770	1/1:4,6:10:4.56:75,5,0	1/1:13,10:21:60.16:785,60,0	1/1:9,4:12:21.78:204,22,0	1/1:7,4:10:21:244,21,0
chr10	64521891	.	G	GAGAGAGAA	8234.97	PASS	AB=0.927;AC=39;AF=0.696;AN=56;BaseQRankSum=5.047;DP=641;FS=22.429;HRun=0;HaplotypeScore=240.7619;InbreedingCoeff=0.5117;MQ=62.69;MQ0=43;MQRankSum=-9.102;QD=23.53;ReadPosRankSum=-4.766;VQSLOD=2.2269;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:12:16.67:175,17,0	0/1:9,0:9:13.83:260,0,14	0/0:101,0:34:6.57:0,7,391	0/0:113,0:36:23.35:0,23,451	1/1:20,3:20:1.18:159,1,0	1/1:19,2:20:15.79:439,16,0	1/1:13,1:9:11.90:84,12,0	1/1:14,0:11:9.05:556,9,0	0/0:18,0:18:35.75:0,36,679	1/1:12,1:12:29.56:1103,30,0	0/1:15,2:16:54.83:125,0,55	1/1:13,1:12:27.91:373,28,0	0/0:14,0:14:36.07:0,36,761	1/1:21,4:24:40.38:584,40,0	1/1:18,3:20:14.87:412,15,0	1/1:18,2:17:22.54:468,23,0	1/1:11,1:12:15:212,15,0	1/1:11,0:9:11.51:260,12,0	0/1:20,0:16:7.45:534,0,7	1/1:19,0:18:7.86:336,8,0	1/1:8,0:6:8.99:137,9,0	1/1:14,2:15:25.47:250,25,0	0/0:16,0:15:36.70:0,37,948	0/0:25,0:25:54.16:0,54,1194	0/1:10,1:11:12.27:43,0,12	1/1:23,0:21:33.39:836,33,0	0/1:11,3:13:8.61:369,0,9	1/1:10,1:10:17.84:517,18,0
chr10	64521939	.	GTGTGTGTGTC	G	1065.56	PASS	AB=0.891;AC=13;AF=0.232;AN=56;BaseQRankSum=9.713;DP=687;FS=29.031;HRun=0;HaplotypeScore=241.0001;InbreedingCoeff=-0.3183;MQ=57.96;MQ0=39;MQRankSum=-6.100;QD=4.65;ReadPosRankSum=-4.999;VQSLOD=0.1922;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:15:18.52:0,19,854	0/1:10,1:11:54.89:55,0,702	0/0:94,0:31:65.82:0,66,2292	0/0:119,1:35:16.08:0,16,1603	0/0:17,0:16:12.80:0,13,861	0/1:22,2:25:90.69:91,0,1436	0/0:18,0:16:25.40:0,25,1037	0/0:24,0:23:66.23:0,66,3181	0/0:11,0:11:24.07:0,24,869	0/1:17,1:18:45.81:46,0,1527	0/1:9,3:12:30.35:30,0,347	0/1:13,2:14:70.49:70,0,1100	0/0:19,0:19:48.16:0,48,2130	0/1:21,1:22:69.50:70,0,997	0/1:21,2:23:60.02:60,0,1560	0/0:18,1:18:35.70:0,36,1347	0/1:10,1:11:84.73:85,0,713	0/1:14,1:14:51.65:52,0,1420	0/0:23,0:19:49.55:0,50,2142	0/0:19,0:19:1.28:0,1,610	0/0:25,0:22:43.50:0,44,2051	0/1:18,2:20:28.15:28,0,331	0/0:14,0:12:36.12:0,36,1577	0/0:22,0:22:57.05:0,57,2396	0/1:3,2:5:70.83:71,0,128	0/1:27,3:28:99:248,0,2602	0/1:19,3:22:99:314,0,508	0/0:17,0:14:36.12:0,36,1724
chr10	64522251	.	CTGTGTGTG	C	6425.01	PASS	AB=0.804;AC=37;AF=0.685;AN=54;BaseQRankSum=4.673;DP=653;FS=5.957;HRun=0;HaplotypeScore=193.3178;InbreedingCoeff=0.4651;MQ=58.56;MQ0=13;MQRankSum=-5.119;QD=14.91;ReadPosRankSum=3.391;VQSLOD=3.6177;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:46:44.72:0,45,1226	1/1:9,5:15:21.07:459,21,0	./.	0/0:40,0:24:3.86:0,4,23	0/1:11,6:17:17.92:42,0,18	1/1:15,5:20:21.05:422,21,0	1/1:10,2:13:15.02:301,15,0	0/0:35,0:33:33.04:0,33,651	0/1:12,0:19:53.74:62,0,54	1/1:11,4:16:12.04:281,12,0	1/1:11,1:12:6:75,6,0	1/1:14,6:21:24.04:543,24,0	0/0:18,0:18:27.09:0,27,983	1/1:14,8:24:11.84:268,12,0	1/1:16,16:31:39.04:766,39,0	1/1:14,11:27:36.06:770,36,0	0/1:25,3:27:76.34:286,0,76	0/1:19,0:19:27.07:27,0,167	1/1:16,3:17:17.86:325,18,0	0/1:5,6:11:8.92:235,0,9	1/1:31,3:33:5.76:31,6,0	1/1:11,6:17:6:99,6,0	0/0:17,0:16:18.04:0,18,421	0/0:27,0:33:32.87:0,33,1050	1/1:6,1:8:3.01:56,3,0	1/1:22,6:29:22.48:599,22,0	1/1:16,10:28:27.04:582,27,0	1/1:14,3:16:12:197,12,0
chr10	64522316	.	CTA	C	5693.73	PASS	AB=0.981;AC=42;AF=0.750;AN=56;BaseQRankSum=11.432;DP=793;FS=6.354;HRun=0;HaplotypeScore=223.3004;InbreedingCoeff=0.7947;MQ=56.17;MQ0=10;MQRankSum=-0.616;QD=9.70;ReadPosRankSum=7.813;VQSLOD=3.5750;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:32,0:32:15.38:289,15,0	1/1:18,0:18:28.46:220,28,0	0/0:50,0:33:64.68:0,65,1206	0/0:54,1:35:48.47:0,48,1291	1/1:15,0:15:23.09:124,23,0	1/1:27,1:28:36.50:286,37,0	1/1:26,0:26:30.64:248,31,0	0/1:28,0:28:85.79:182,0,86	0/0:28,0:28:65.68:0,66,1133	1/1:31,0:31:69.35:315,69,0	1/1:16,0:16:25.83:133,26,0	1/1:21,1:22:49.29:310,49,0	0/0:20,0:20:42.02:0,42,860	1/1:27,1:28:49.13:316,49,0	1/1:40,2:41:80.61:467,81,0	1/1:32,1:33:47.14:371,47,0	0/1:25,1:25:8.26:243,0,8	1/1:19,1:20:43.98:289,44,0	1/1:16,0:16:8.31:130,8,0	1/1:33,0:33:40.29:235,40,0	1/1:47,0:47:43.56:366,44,0	1/1:24,0:23:40.03:216,40,0	0/0:16,0:16:36.08:0,36,639	0/0:31,0:31:77.45:0,77,1320	1/1:16,0:16:32.01:190,32,0	1/1:33,0:33:18.89:296,19,0	1/1:27,0:27:33.31:262,33,0	1/1:26,0:22:8.59:205,9,0
chr10	64522318	.	ATG	A	14875.98	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=4.502;DP=796;FS=8.843;HRun=0;HaplotypeScore=193.6709;InbreedingCoeff=0.9885;MQ=58.12;MQ0=9;MQRankSum=-0.426;QD=25.34;ReadPosRankSum=5.880;VQSLOD=4.6217;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,28:32:69.22:887,69,0	1/1:4,14:18:33.11:425,33,0	0/0:55,0:36:79.93:0,80,1144	0/0:59,0:39:81.87:0,82,1371	1/1:4,12:16:24.08:310,24,0	1/1:6,22:28:57.96:723,58,0	1/1:2,25:27:54.17:695,54,0	1/1:7,21:28:63.20:810,63,0	0/0:28,0:28:69.15:0,69,1093	1/1:5,27:32:84.17:1042,84,0	1/1:2,15:17:27.09:348,27,0	1/1:5,17:22:51.16:648,51,0	0/0:18,1:19:9.53:0,10,690	1/1:10,18:28:54.17:684,54,0	1/1:9,32:40:84.27:1078,84,0	1/1:6,26:32:69.22:887,69,0	1/1:9,17:25:46.36:612,46,0	1/1:1,19:20:45.14:565,45,0	1/1:4,12:16:33.09:408,33,0	1/1:5,27:32:42.13:542,42,0	1/1:6,42:48:81.10:1043,81,0	1/1:3,21:23:41.91:540,42,0	0/0:15,0:15:33.09:0,33,549	0/0:32,0:32:75.24:0,75,1225	1/1:1,15:16:33.11:424,33,0	1/1:4,28:32:78.09:966,78,0	1/1:6,20:26:51.08:656,51,0	1/1:5,21:22:45.15:579,45,0
chr10	64523474	.	TTCTC	T	1349.89	PASS	AB=0.961;AC=28;AF=0.609;AN=46;BaseQRankSum=0.593;DP=648;FS=15.118;HRun=0;HaplotypeScore=99.6393;InbreedingCoeff=0.0885;MQ=58.72;MQ0=34;MQRankSum=0.499;QD=3.66;ReadPosRankSum=0.593;VQSLOD=0.7141;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:23:14.96:0,15,159	0/1:14,0:13:20.52:124,0,21	./.	./.	./.	1/1:19,3:22:3.01:46,3,0	1/1:19,0:15:2.71:46,3,0	./.	0/1:18,0:18:25.58:26,0,229	0/1:32,2:36:14.99:255,0,15	0/1:18,0:18:14.31:14,0,19	1/1:15,1:15:10.92:84,11,0	0/0:17,0:15:14.71:0,15,167	1/1:8,6:14:5.80:92,6,0	1/1:20,0:20:15.80:184,16,0	0/1:21,3:22:37.22:37,0,39	1/1:9,2:10:11.46:125,11,0	0/1:16,2:18:44.69:138,0,45	0/1:22,0:19:0.77:4,0,1	1/1:19,2:21:3.01:46,3,0	0/0:16,0:13:2.21:0,2,13	0/1:28,0:28:20.83:21,0,39	0/0:25,0:25:8.82:0,9,153	0/0:26,0:25:27.48:0,27,438	./.	1/1:33,0:33:3.56:164,4,0	1/1:14,8:22:3.01:46,3,0	1/1:12,1:13:3.01:46,3,0
chr10	64523573	.	T	TGCCCTTGA	43771.30	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-5.502;DP=687;FS=3.994;HRun=0;HaplotypeScore=155.0779;InbreedingCoeff=0.9878;MQ=61.48;MQ0=3;MQRankSum=-13.811;QD=81.21;ReadPosRankSum=-1.750;VQSLOD=4.7085;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:9,23:40:66.14:2610,66,0	1/1:4,14:20:51.18:2033,51,0	0/0:28,0:25:43.04:0,43,1100	0/0:30,0:25:56.96:0,57,1364	1/1:4,19:29:60.21:2006,60,0	1/1:2,16:23:45.15:1863,45,0	1/1:4,17:23:39.13:1525,39,0	1/1:16,11:35:72.25:2440,72,0	0/0:25,0:25:66.23:0,66,1681	1/1:9,16:29:69.24:2664,69,0	1/1:4,18:24:54.19:2264,54,0	1/1:0,20:21:51.18:2186,51,0	0/0:22,0:22:60.19:0,60,1504	1/1:4,18:26:57.20:2409,57,0	1/1:5,25:32:69.24:2875,69,0	1/1:5,15:22:48.16:1897,48,0	1/1:4,9:18:27.09:1045,27,0	1/1:8,8:17:30.10:1132,30,0	1/1:4,13:18:51.15:1670,51,0	1/1:3,14:20:45.15:1699,45,0	1/1:5,9:17:30.10:1058,30,0	1/1:5,32:43:96.33:4026,96,0	0/0:15,0:15:42.13:0,42,1083	0/0:28,0:28:78.27:0,78,2106	1/1:2,12:17:39.09:1487,39,0	1/1:7,12:22:54.17:2001,54,0	1/1:5,18:30:60.16:2494,60,0	1/1:0,3:3:9.03:387,9,0
chr10	64525309	.	TTCTCTCTCTCTC	T	517.01	PASS	AB=1.000;AC=21;AF=0.525;AN=40;BaseQRankSum=3.550;DP=618;FS=0.000;HRun=0;HaplotypeScore=163.7648;InbreedingCoeff=0.4388;MQ=58.49;MQ0=39;MQRankSum=-2.032;QD=2.47;ReadPosRankSum=1.492;VQSLOD=2.7287;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:24:2.98:25,3,0	./.	./.	./.	./.	1/1:12,0:11:0.47:1,0,0	1/1:21,3:24:3.01:70,3,0	./.	1/1:17,0:18:3.01:44,3,0	1/1:25,0:24:6.01:61,6,0	./.	0/0:17,0:17:6.02:0,6,113	0/0:15,0:15:9.50:0,10,411	1/1:6,0:7:6.01:67,6,0	1/1:17,1:18:3.01:102,3,0	1/1:13,1:13:6.01:132,6,0	1/1:17,3:20:3.01:102,3,0	0/0:20,0:20:3.48:0,3,67	0/0:12,0:12:11.39:0,11,195	0/0:19,0:19:3.01:0,3,42	0/0:21,0:19:6:0,6,50	./.	./.	0/0:34,0:34:27.09:0,27,892	1/1:20,0:22:3:37,3,0	0/1:24,0:22:7.34:7,0,141	0/0:15,0:14:3.90:0,4,44	0/0:15,0:14:0.89:0,1,2
chr10	64525504	.	T	TAC	26798.84	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-12.493;DP=686;FS=0.849;HRun=0;HaplotypeScore=71.3166;InbreedingCoeff=0.9989;MQ=73.37;MQ0=2;MQRankSum=-2.239;QD=46.69;ReadPosRankSum=1.931;VQSLOD=5.8998;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,52:55:99:2368,132,0	1/1:0,11:11:30.10:539,30,0	0/0:21,0:21:45.08:0,45,532	0/0:16,0:15:20.94:0,21,295	1/1:1,18:19:51.17:887,51,0	1/1:0,27:27:78.27:1403,78,0	1/1:2,28:30:75.26:1350,75,0	1/1:3,37:42:99:1935,117,0	1/1:0,20:20:54.19:971,54,0	1/1:4,23:28:75.24:1296,75,0	1/1:1,21:23:51.17:898,51,0	1/1:0,28:28:81.28:1457,81,0	0/0:24,0:24:69.23:0,69,964	1/1:1,17:18:48.16:864,48,0	1/1:0,20:20:54.19:972,54,0	1/1:0,20:20:60.21:1080,60,0	1/1:1,22:23:54.19:972,54,0	1/1:1,15:16:39.13:702,39,0	1/1:2,23:25:69.15:1142,69,0	1/1:0,21:22:60.21:1077,60,0	1/1:1,39:39:99:1836,102,0	1/1:1,17:18:51.17:910,51,0	0/0:18,0:17:51.16:0,51,697	0/0:33,0:33:96.26:0,96,1303	1/1:1,18:19:54.19:972,54,0	1/1:1,27:27:75.26:1330,75,0	1/1:1,25:24:57.20:1026,57,0	1/1:0,15:15:45.15:810,45,0
chr10	64525782	.	TC	T	512.02	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.252;DP=524;FS=6.612;HRun=2;HaplotypeScore=65.9302;InbreedingCoeff=0.9705;MQ=87.67;MQ0=1;MQRankSum=0.417;QD=30.12;ReadPosRankSum=-3.928;VQSLOD=1.6969;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:50.86:0,51,792	0/0:6,0:6:18.06:0,18,288	0/0:23,0:23:52.35:0,52,949	0/0:20,0:20:49.17:0,49,836	0/0:9,0:9:24.08:0,24,382	0/0:14,0:13:39.12:0,39,600	0/0:28,0:28:81.28:0,81,1295	1/1:0,17:17:44.89:607,45,0	0/0:23,0:23:57.19:0,57,911	0/0:15,0:15:45.14:0,45,697	0/0:11,0:11:27.09:0,27,432	0/0:24,0:24:69.22:0,69,1078	0/0:15,0:15:42.14:0,42,668	0/0:35,0:35:99:0,102,1628	0/0:27,0:27:81.26:0,81,1272	0/0:23,0:23:69.19:0,69,1049	0/0:33,0:33:96.30:0,96,1508	0/0:17,0:17:51.17:0,51,815	0/0:20,0:20:57.18:0,57,889	0/0:10,0:10:24.08:0,24,382	0/0:40,0:40:99:0,114,1817	0/0:5,0:5:15.04:0,15,217	0/0:11,0:11:33.11:0,33,528	0/0:26,0:26:69.23:0,69,1094	0/0:16,0:16:45.15:0,45,717	0/0:13,0:13:39.13:0,39,623	0/0:15,0:15:45.15:0,45,715	0/0:9,0:9:27.09:0,27,432
chr10	64526637	.	T	TG	24952.97	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=-12.037;DP=686;FS=1.273;HRun=3;HaplotypeScore=61.7205;InbreedingCoeff=0.9836;MQ=80.90;MQ0=0;MQRankSum=-3.223;QD=43.17;ReadPosRankSum=3.299;VQSLOD=3.5822;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,54:55:99:2302,144,0	1/1:1,15:16:42.14:671,42,0	0/0:18,0:18:51.15:0,51,670	0/0:19,0:19:8.46:0,8,536	1/1:0,31:31:75.26:1197,75,0	1/1:0,16:16:48.16:767,48,0	1/1:0,22:22:60.20:959,60,0	1/1:0,33:32:93.30:1461,93,0	1/1:1,22:23:57.19:911,57,0	1/1:0,25:25:75.26:1192,75,0	1/1:1,13:14:36.12:557,36,0	1/1:0,33:33:96.33:1532,96,0	0/0:27,0:27:81.25:0,81,1101	1/1:1,22:23:54.18:861,54,0	1/1:0,26:27:78.24:1247,78,0	1/1:0,18:18:51.17:815,51,0	1/1:0,37:37:99:1618,102,0	1/1:0,23:23:66.23:1055,66,0	1/1:1,21:21:63.17:914,63,0	1/1:1,19:20:54.18:863,54,0	1/1:0,43:43:99:1870,117,0	1/1:2,23:25:66.12:1023,66,0	0/0:12,0:12:36.10:0,36,475	0/0:32,0:32:96.30:0,96,1308	1/1:0,8:8:21.07:336,21,0	1/1:1,28:29:84.26:1316,84,0	1/1:0,20:20:57.19:911,57,0	1/1:0,15:15:36.12:576,36,0
chr10	64527951	.	GCA	G	2895.59	PASS	AB=0.983;AC=27;AF=0.482;AN=56;BaseQRankSum=11.085;DP=543;FS=15.833;HRun=0;HaplotypeScore=105.9201;InbreedingCoeff=-0.1853;MQ=74.14;MQ0=3;MQRankSum=-4.159;QD=6.73;ReadPosRankSum=9.111;VQSLOD=0.8830;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:46,1:47:18.76:340,0,19	0/1:6,0:6:4.84:42,0,5	0/0:21,0:22:42.98:0,43,559	0/0:20,0:20:51.94:0,52,660	0/1:24,0:24:58.74:139,0,59	0/1:26,1:26:10.01:158,0,10	0/1:31,1:32:14.65:244,0,15	0/1:20,0:20:67.27:69,0,67	0/0:20,0:20:51.56:0,52,296	0/1:19,2:21:32.01:201,0,32	1/1:9,0:9:16.31:78,16,0	0/1:22,2:24:53.95:196,0,54	0/0:16,0:16:48.15:0,48,775	1/1:11,2:13:12.52:165,13,0	0/1:23,0:23:8.60:155,0,9	1/1:16,0:15:12.42:117,12,0	0/1:27,0:26:56.65:150,0,57	0/1:15,0:15:8.69:119,0,9	0/1:12,0:12:12.20:92,0,12	0/1:8,0:8:5.51:59,0,6	0/1:19,0:19:58.86:78,0,59	1/1:18,1:19:15.37:179,15,0	0/0:11,0:11:27.07:0,27,405	0/0:23,0:23:65.72:0,66,976	0/1:10,0:10:19.88:67,0,20	0/1:29,1:30:27.18:220,0,27	0/1:17,0:17:27.26:144,0,27	1/1:11,0:11:2.85:56,3,0
chr10	64527953	.	ACC	A	10801.48	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-1.143;DP=544;FS=17.216;HRun=10;HaplotypeScore=82.6817;InbreedingCoeff=0.9843;MQ=73.06;MQ0=3;MQRankSum=-3.656;QD=25.06;ReadPosRankSum=3.632;VQSLOD=2.9862;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,39:46:99:1203,108,0	1/1:1,5:6:12.03:134,12,0	0/0:19,0:20:16:0,16,369	0/0:19,0:19:36.57:0,37,375	1/1:4,20:24:45.10:501,45,0	1/1:4,23:26:63.16:702,63,0	1/1:5,26:31:78.19:869,78,0	1/1:3,16:19:42.07:458,42,0	0/0:4,0:20:37.43:0,37,129	1/1:3,15:18:48.12:533,48,0	1/1:0,10:10:20.97:206,21,0	1/1:6,17:23:51.12:568,51,0	0/0:19,0:19:54.09:0,54,754	1/1:3,10:13:33.08:365,33,0	1/1:3,21:24:54.14:602,54,0	1/1:1,16:16:39.11:435,39,0	1/1:5,22:26:51.12:568,51,0	1/1:2,13:15:39.09:435,39,0	1/1:2,12:14:36.03:371,36,0	1/1:1,7:8:18:187,18,0	1/1:4,15:20:41.83:447,42,0	1/1:5,16:21:42.11:467,42,0	0/0:13,0:13:27.05:0,27,373	0/0:21,0:21:53.66:0,54,796	1/1:3,7:10:15.04:167,15,0	1/1:5,26:31:80.76:882,81,0	1/1:1,14:15:42.11:468,42,0	1/1:1,11:12:21.06:234,21,0
chr10	64528299	.	GGGAGGAAT	G	13869.05	PASS	AB=0.542;AC=43;AF=0.768;AN=56;BaseQRankSum=10.641;DP=387;FS=14.431;HRun=0;HaplotypeScore=120.5393;InbreedingCoeff=0.8489;MQ=95.57;MQ0=0;MQRankSum=-12.756;QD=49.89;ReadPosRankSum=0.117;VQSLOD=3.9466;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,18:22:45.15:1189,45,0	1/1:1,5:6:15.05:406,15,0	0/0:20,0:20:54.15:0,54,1996	0/0:28,0:28:48.32:0,48,2504	1/1:5,17:22:39.13:1023,39,0	1/1:3,8:11:24.08:641,24,0	1/1:2,6:8:12.04:315,12,0	1/1:2,13:15:39.13:1039,39,0	0/0:13,0:13:33.10:0,33,1339	1/1:10,14:24:42.11:1036,42,0	1/1:6,8:14:18.06:477,18,0	1/1:2,9:11:27.09:732,27,0	0/0:14,0:14:42.14:0,42,1807	1/1:0,12:12:33.11:885,33,0	1/1:3,7:10:21.07:561,21,0	0/1:2,11:13:96.79:780,0,97	1/1:6,10:16:18.06:488,18,0	1/1:2,2:4:6.02:163,6,0	1/1:6,11:17:30.55:660,31,0	1/1:2,8:10:21.07:553,21,0	1/1:4,8:12:9.03:218,9,0	1/1:3,5:8:15.05:389,15,0	0/0:13,0:13:36.12:0,36,1547	0/0:21,0:21:48.16:0,48,2014	1/1:5,9:14:27.09:714,27,0	1/1:1,8:9:24.06:553,24,0	1/1:4,9:13:27.09:721,27,0	1/1:0,7:7:12.04:325,12,0
chr10	64529788	.	TTAA	T	2173.36	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.455;DP=522;FS=2.000;HRun=0;HaplotypeScore=81.3164;InbreedingCoeff=0.9759;MQ=75.23;MQ0=0;MQRankSum=-7.971;QD=43.47;ReadPosRankSum=-1.504;VQSLOD=4.7298;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,23:25:57.19:992,57,0	0/0:5,0:5:15.05:0,15,369	0/0:23,0:23:69.20:0,69,1488	0/0:16,0:15:45.09:0,45,1011	0/0:21,0:21:63.19:0,63,1377	0/0:22,0:22:66.23:0,66,1624	0/0:24,0:24:72.19:0,72,1628	1/1:0,24:24:72.23:1302,72,0	0/0:16,0:16:48.16:0,48,1179	0/0:16,0:16:48.16:0,48,1040	0/0:22,0:22:66.21:0,66,1576	0/0:16,0:16:48.16:0,48,1181	0/0:10,0:10:30.10:0,30,738	0/0:14,0:14:42.14:0,42,983	0/0:20,0:20:60.18:0,60,1382	0/0:16,0:16:45.14:0,45,1034	0/0:24,0:24:69.23:0,69,1557	0/0:19,0:19:54.15:0,54,1219	0/0:22,0:22:66.20:0,66,1445	0/0:22,0:22:66.16:0,66,1570	0/0:13,0:13:39.13:0,39,960	0/0:16,0:16:48.15:0,48,1132	0/0:23,0:23:69.23:0,69,1622	0/0:10,0:10:30.10:0,30,739	0/0:18,0:18:54.19:0,54,1331	0/0:32,0:32:96.33:0,96,2312	0/0:28,0:28:84.29:0,84,2010	0/0:4,0:4:12.04:0,12,296
chr10	64529801	.	A	ATT	1462.05	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=6.973;DP=530;FS=5.640;HRun=10;HaplotypeScore=78.6279;InbreedingCoeff=0.8310;MQ=68.53;MQ0=0;MQRankSum=-5.108;QD=14.48;ReadPosRankSum=-4.039;VQSLOD=1.2114;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,21:30:71.53:884,72,0	0/0:5,0:5:9:0,9,92	0/0:16,0:17:24.83:0,25,233	0/1:18,0:17:7.90:8,0,147	1/1:3,0:21:15.93:150,16,0	0/0:25,0:26:74.87:0,75,730	0/0:25,0:26:40.13:0,40,612	1/1:14,13:31:44.18:565,44,0	0/0:20,0:20:57.13:0,57,580	0/0:13,0:13:27.01:0,27,268	0/0:22,0:23:47.82:0,48,537	0/0:18,0:18:54.11:0,54,543	0/0:11,0:11:27.02:0,27,268	0/0:12,0:12:20.98:0,21,214	0/0:18,0:18:48.08:0,48,488	0/0:12,0:12:27.05:0,27,275	0/0:24,0:24:57.10:0,57,580	0/0:17,0:20:41.56:0,42,461	0/0:18,0:19:38.81:0,39,449	0/0:17,0:17:33:0,33,336	0/0:14,0:14:33.02:0,33,329	0/0:16,0:16:36:0,36,349	0/0:20,0:20:51.06:0,51,512	0/0:15,0:15:36.05:0,36,359	0/0:21,0:22:55.17:0,55,558	0/0:25,0:26:56.75:0,57,554	0/0:26,0:26:57.54:0,58,633	0/0:8,0:9:17.77:0,18,234
chr10	64529963	.	A	AT	7393.26	PASS	AB=0.728;AC=40;AF=0.714;AN=56;BaseQRankSum=-7.372;DP=517;FS=3.704;HRun=11;HaplotypeScore=53.4076;InbreedingCoeff=0.4094;MQ=69.05;MQ0=0;MQRankSum=0.286;QD=17.73;ReadPosRankSum=0.672;VQSLOD=5.8551;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:38:88.64:0,89,679	1/1:2,7:9:21.04:213,21,0	0/0:8,0:8:1.83:0,2,48	0/1:11,0:9:5.54:10,0,6	1/1:7,19:28:21.92:508,22,0	1/1:1,21:22:33.88:525,34,0	1/1:3,20:23:27.86:464,28,0	0/1:21,2:23:22.17:22,0,211	1/1:2,13:16:38.91:380,39,0	1/1:3,17:20:51.05:500,51,0	1/1:3,12:15:27.01:260,27,0	0/1:6,11:18:10.57:251,0,11	0/0:16,0:18:39.90:0,40,290	0/1:4,6:10:22.48:141,0,22	1/1:7,8:15:32.88:307,33,0	1/1:2,16:18:1.05:352,1,0	1/1:3,25:28:57.11:579,57,0	1/1:4,6:10:9.02:91,9,0	1/1:4,17:21:7.57:422,8,0	1/1:0,19:19:45.08:452,45,0	0/1:6,13:19:27.63:293,0,28	1/1:2,14:18:41.59:378,42,0	0/0:15,1:18:18.45:0,18,304	0/0:16,0:17:37.89:0,38,284	1/1:2,15:18:44.92:440,45,0	1/1:4,13:17:15.80:327,16,0	1/1:5,19:25:42.39:409,42,0	0/1:7,3:12:48.94:69,0,49
chr10	64531758	.	AT	A	9564.02	PASS	AB=0.883;AC=46;AF=0.821;AN=56;BaseQRankSum=6.997;DP=624;FS=5.252;HRun=10;HaplotypeScore=69.1526;InbreedingCoeff=0.7754;MQ=69.00;MQ0=0;MQRankSum=-0.638;QD=17.78;ReadPosRankSum=-0.212;VQSLOD=5.4599;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,0:20:34.63:102,35,0	1/1:3,9:12:23.99:208,24,0	0/1:10,1:12:4.88:5,0,165	0/1:9,1:10:6.41:6,0,115	1/1:2,23:25:59.96:521,60,0	1/1:0,14:14:38.99:339,39,0	1/1:3,19:22:53.98:469,54,0	1/1:5,0:35:49.41:146,49,0	0/0:20,0:20:57.15:0,57,630	1/1:6,25:31:74.94:647,75,0	1/1:3,14:17:46.80:395,47,0	1/1:0,13:13:38.99:338,39,0	0/0:16,0:16:42.09:0,42,447	1/1:9,19:28:56.97:495,57,0	1/1:3,13:16:35.99:313,36,0	1/1:5,22:27:13.54:514,14,0	1/1:5,30:35:47.79:644,48,0	1/1:5,17:22:47.97:416,48,0	1/1:7,25:32:74.92:640,75,0	1/1:3,18:21:50.98:443,51,0	1/1:4,17:21:47.96:417,48,0	1/1:1,20:21:56.98:495,57,0	0/0:22,0:22:48.11:0,48,514	0/0:28,0:28:75.20:0,75,829	1/1:5,19:24:56.97:495,57,0	1/1:7,29:36:64.84:726,65,0	1/1:6,23:29:2.79:480,3,0	1/1:3,12:15:35.99:312,36,0
chr10	64533207	.	A	ATGTGTGTGTG	8261.52	PASS	AB=0.725;AC=35;AF=0.625;AN=56;BaseQRankSum=0.643;DP=777;FS=25.727;HRun=0;HaplotypeScore=254.6301;InbreedingCoeff=0.6345;MQ=58.69;MQ0=2;MQRankSum=-7.908;QD=17.43;ReadPosRankSum=-5.855;VQSLOD=1.6588;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:55:99:0,102,2629	1/1:7,0:7:6:122,6,0	0/0:26,0:18:2.43:0,2,112	0/0:30,0:20:3.01:0,3,89	1/1:16,4:21:3:25,3,0	0/0:20,2:23:0.47:0,0,1	1/1:29,4:42:5.54:298,6,0	0/0:32,0:32:23.91:0,24,621	0/0:28,0:30:50.93:0,51,1277	1/1:30,3:35:46.01:1285,46,0	0/0:15,0:17:0:0,0,0	1/1:22,1:30:9.34:293,9,0	0/0:17,0:20:23.68:0,24,652	1/1:11,1:16:3.01:91,3,0	1/1:20,6:30:8.82:311,9,0	1/1:20,10:31:21.07:860,21,0	1/1:29,8:40:27.56:983,28,0	0/1:18,0:29:8.86:487,0,9	1/1:23,0:25:26.67:693,27,0	1/1:14,3:18:3.01:108,3,0	1/1:41,0:41:15.17:332,15,0	1/1:16,5:24:1.74:147,2,0	0/0:25,0:25:34.14:0,34,934	0/0:36,0:44:72.25:0,72,1867	1/1:16,0:16:8.43:295,8,0	1/1:23,4:34:51.17:1486,51,0	1/1:15,0:25:9.03:319,9,0	1/1:9,0:9:6.02:126,6,0
chr10	64533509	.	G	GTGA	13825.93	PASS	AB=1.000;AC=45;AF=0.804;AN=56;BaseQRankSum=-6.056;DP=945;FS=43.083;HRun=0;HaplotypeScore=113.9074;InbreedingCoeff=0.7639;MQ=51.89;MQ0=77;MQRankSum=1.114;QD=18.66;ReadPosRankSum=3.863;VQSLOD=2.3937;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:21,51:65:41.99:711,42,0	1/1:3,1:4:9:137,9,0	0/0:40,0:17:23.64:0,24,222	0/0:54,0:16:8.14:0,8,114	1/1:3,13:14:23.95:404,24,0	1/1:13,14:21:21.07:441,21,0	1/1:11,21:30:18.06:379,18,0	0/1:50,0:40:19.67:553,0,20	1/1:6,29:33:45.15:937,45,0	1/1:14,21:24:12.07:873,12,0	1/1:10,2:9:8.99:154,9,0	1/1:6,27:33:41.87:833,42,0	0/0:46,0:46:99:0,117,1569	1/1:7,29:35:42.14:879,42,0	1/1:8,22:28:0.37:570,0,0	1/1:2,26:29:19.15:684,19,0	1/1:6,25:33:19.19:544,19,0	1/1:23,4:27:38.01:870,38,0	1/1:13,7:12:21:309,21,0	1/1:5,10:12:23.97:409,24,0	1/1:36,92:116:76.87:1581,77,0	1/1:10,2:10:17.98:308,18,0	0/0:17,0:13:33.08:0,33,453	0/0:46,0:44:93.83:0,94,1585	1/1:5,10:13:5.88:126,6,0	1/1:15,27:33:81.07:1485,81,0	1/1:2,9:11:15.05:312,15,0	1/1:12,0:12:18.06:329,18,0
chr10	64533527	.	ATGATGGTGGTGG	A	1216.18	PASS	AB=0.901;AC=3;AF=0.054;AN=56;BaseQRankSum=-0.589;DP=870;FS=17.329;HRun=0;HaplotypeScore=230.3084;InbreedingCoeff=-0.0585;MQ=47.03;MQ0=120;MQRankSum=-3.912;QD=8.88;ReadPosRankSum=-5.158;VQSLOD=0.2066;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:58,0:50:99:241,0,390	0/0:7,0:6:8.60:0,9,127	0/1:10,0:5:1.69:2,0,120	0/0:20,0:5:8.93:0,9,123	0/0:14,0:10:15.04:0,15,353	0/0:28,0:20:30.08:0,30,626	0/0:35,0:29:42.10:0,42,864	0/1:40,29:56:99:1064,0,609	0/0:42,0:36:60.04:0,60,1476	0/0:39,0:22:56.72:0,57,1294	0/0:14,0:8:12.03:0,12,204	0/0:32,0:31:54.17:0,54,1172	0/0:40,0:38:99:0,105,3852	0/0:32,0:30:51.64:0,52,1183	0/0:33,0:27:45.07:0,45,1332	0/0:31,0:31:51.31:0,51,1336	0/0:29,0:28:19.24:0,19,921	0/0:25,0:24:18.45:0,18,1053	0/0:22,0:8:23.89:0,24,317	0/0:15,0:10:18:0,18,379	0/0:113,0:93:81.25:0,81,2351	0/0:16,0:11:20.77:0,21,385	0/0:17,0:10:30.08:0,30,1161	0/0:51,0:47:99:0,126,5059	0/0:11,0:9:11.42:0,11,162	0/0:44,0:29:76.93:0,77,1375	0/0:12,0:11:17.97:0,18,306	0/0:11,0:8:14.18:0,14,242
chr10	64533569	.	A	ATGGTGG	6553.44	PASS	AB=0.938;AC=37;AF=0.712;AN=52;BaseQRankSum=-0.848;DP=612;FS=2.667;HRun=0;HaplotypeScore=129.2868;InbreedingCoeff=0.7459;MQ=44.50;MQ0=64;MQRankSum=-5.335;QD=16.06;ReadPosRankSum=-2.676;VQSLOD=4.1699;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:27:30.10:0,30,571	0/0:5,4:9:0.47:0,0,1	1/1:4,0:1:1.55:4,2,0	./.	1/1:6,2:6:3.01:95,3,0	1/1:24,3:22:21.48:350,21,0	1/1:34,2:32:39.08:678,39,0	0/0:32,0:25:21:0,21,215	0/0:30,0:26:42.12:0,42,790	0/1:28,2:23:4.76:591,0,5	1/1:7,2:8:8.83:64,9,0	1/1:19,5:23:29.98:693,30,0	0/0:28,0:25:39.04:0,39,591	1/1:18,1:17:27.02:414,27,0	1/1:31,5:28:27.07:610,27,0	1/1:18,5:23:27.05:675,27,0	1/1:13,2:15:14.92:249,15,0	1/1:22,2:22:32.93:537,33,0	1/1:18,0:13:17.95:252,18,0	1/1:5,1:5:3.01:35,3,0	1/1:76,5:64:20.04:282,20,0	1/1:6,8:13:6.02:117,6,0	0/0:12,0:12:21.04:0,21,385	0/0:48,0:48:74.29:0,74,1248	1/1:6,1:6:6.02:124,6,0	1/1:16,3:15:23.96:559,24,0	1/1:4,2:6:9.03:226,9,0	./.
chr10	64535182	.	GTTCTTTTTTTTTTT	G	2205.30	PASS	AB=0.950;AC=19;AF=0.339;AN=56;BaseQRankSum=9.834;DP=412;FS=35.920;HRun=0;HaplotypeScore=133.7355;InbreedingCoeff=-0.4975;MQ=63.58;MQ0=18;MQRankSum=-4.570;QD=8.79;ReadPosRankSum=4.814;VQSLOD=0.9021;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:20.18:0,20,370	0/1:3,0:3:10.87:11,0,24	0/0:31,0:7:10.83:0,11,137	0/0:35,0:12:15.34:0,15,184	0/0:20,0:19:32:0,32,382	0/1:17,0:18:83.21:285,0,83	0/1:15,0:15:99:172,0,100	0/0:19,0:19:48.65:0,49,582	0/0:7,0:7:9:0,9,195	0/1:21,0:19:99:255,0,193	0/1:9,0:9:48.68:49,0,87	0/1:8,4:12:83.62:84,0,131	0/0:4,0:4:9.01:0,9,125	0/1:11,6:17:99:185,0,249	0/1:15,0:15:99:239,0,154	0/1:18,0:19:99:247,0,144	0/1:15,1:16:99:107,0,227	0/1:17,0:16:55.93:329,0,56	0/1:17,0:15:99:132,0,212	0/1:15,0:14:3.19:3,0,173	0/1:16,0:15:4.05:4,0,177	0/1:9,0:9:24.42:24,0,134	0/0:16,0:15:39.06:0,39,824	0/0:14,0:14:21.89:0,22,473	0/1:9,0:9:16.03:16,0,103	0/1:9,0:9:36.97:37,0,53	0/1:5,3:8:85.32:100,0,85	0/1:6,0:6:21.76:83,0,22
chr10	64535396	.	TG	T	6085.76	PASS	AB=0.866;AC=54;AF=0.964;AN=56;BaseQRankSum=4.382;DP=316;FS=17.626;HRun=3;HaplotypeScore=255.3364;InbreedingCoeff=-0.0485;MQ=71.28;MQ0=1;MQRankSum=-1.525;QD=19.26;ReadPosRankSum=3.120;VQSLOD=1.4484;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,8:14:27:255,27,0	1/1:3,5:8:21.01:209,21,0	0/1:10,2:11:23.83:24,0,100	0/1:12,2:12:23.20:59,0,23	1/1:2,8:9:18.04:182,18,0	1/1:6,4:10:17.88:151,18,0	1/1:6,11:17:33.55:341,34,0	1/1:9,10:19:30.81:311,31,0	1/1:2,12:14:38.96:373,39,0	1/1:0,8:8:20.06:184,20,0	1/1:2,8:10:15.50:154,16,0	1/1:2,12:14:38.81:363,39,0	1/1:1,10:11:30.05:296,30,0	1/1:4,12:16:36.08:376,36,0	1/1:1,10:11:29.78:280,30,0	1/1:5,9:14:36.31:320,36,0	1/1:6,5:11:18.80:161,19,0	1/1:3,5:8:17.93:158,18,0	1/1:0,4:4:12.02:118,12,0	1/1:2,7:9:18.04:184,18,0	1/1:6,6:12:17.99:167,18,0	1/1:6,5:11:17.95:163,18,0	1/1:1,12:13:36.04:354,36,0	1/1:4,7:11:17.88:168,18,0	1/1:3,9:12:32.90:310,33,0	1/1:4,12:16:33.53:329,34,0	1/1:3,2:5:6.01:62,6,0	1/1:1,1:2:3.01:32,3,0
chr10	64535427	.	TAA	T	3737.77	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=3.596;DP=340;FS=2.469;HRun=3;HaplotypeScore=419.0841;InbreedingCoeff=0.5542;MQ=41.88;MQ0=0;MQRankSum=-2.201;QD=11.19;ReadPosRankSum=2.170;VQSLOD=0.1167;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,13:18:31.79:203,32,0	1/1:6,1:7:2.96:19,3,0	0/0:2,0:2:3.01:0,3,63	0/0:4,0:3:3.48:0,3,51	1/1:5,8:13:20.57:126,21,0	1/1:3,5:8:14.86:101,15,0	1/1:10,5:15:14.79:97,15,0	1/1:12,9:21:24.99:131,25,0	1/1:4,14:18:38.64:263,39,0	1/1:2,9:10:16.66:121,17,0	1/1:5,10:15:29.48:185,29,0	1/1:5,11:16:31.84:201,32,0	1/1:3,10:13:26.70:181,27,0	1/1:7,4:11:11.81:74,12,0	1/1:3,14:17:41.17:265,41,0	1/1:1,15:16:44.45:294,44,0	1/1:2,10:12:26.51:188,27,0	1/1:0,8:8:23.35:161,23,0	1/1:3,3:6:8.86:64,9,0	1/1:4,16:20:35.36:257,35,0	1/1:2,7:9:8.39:34,8,0	1/1:3,5:8:14.20:84,14,0	1/1:8,5:13:8.17:58,8,0	1/1:7,4:11:8.74:50,9,0	1/1:8,10:18:22.03:143,22,0	1/1:5,12:17:32.78:241,33,0	1/1:1,7:9:22.07:150,22,0	1/1:2,2:4:5.97:46,6,0
chr10	64535431	.	G	GT	4164.98	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=3.987;DP=251;FS=0.000;HRun=0;HaplotypeScore=357.6455;InbreedingCoeff=0.5103;MQ=39.64;MQ0=0;MQRankSum=-0.577;QD=16.86;ReadPosRankSum=1.853;VQSLOD=2.1206;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,13:14:35.49:245,35,0	1/1:0,1:1:2.98:21,3,0	0/0:2,0:2:3.01:0,3,41	0/0:2,0:1:3.01:0,3,40	1/1:4,8:12:14.31:136,14,0	1/1:0,5:5:14.90:110,15,0	1/1:2,5:7:17.83:126,18,0	1/1:2,9:11:22.17:117,22,0	1/1:1,14:15:41.74:310,42,0	1/1:1,9:8:16.69:128,17,0	1/1:3,9:13:28.29:190,28,0	1/1:3,11:14:37.41:258,37,0	1/1:0,10:10:26.82:197,27,0	1/1:0,4:4:11.86:80,12,0	1/1:1,14:15:39.53:272,40,0	1/1:1,15:16:44.13:307,44,0	1/1:1,10:11:26.95:221,27,0	1/1:0,8:8:23.70:179,24,0	1/1:0,3:3:8.98:75,9,0	1/1:0,16:16:37.66:286,38,0	1/1:0,7:7:10.59:48,11,0	1/1:2,5:6:14.63:95,15,0	1/1:2,5:7:1.15:55,1,0	1/1:1,4:5:8.88:58,9,0	1/1:3,10:13:24.31:175,24,0	1/1:0,12:12:32.87:261,33,0	1/1:2,7:9:22.92:165,23,0	1/1:0,2:2:5.99:50,6,0
chr10	64535443	.	CT	C	7817.58	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=3.373;DP=250;FS=0.000;HRun=2;HaplotypeScore=340.1191;InbreedingCoeff=0.5613;MQ=39.71;MQ0=0;MQRankSum=-2.712;QD=31.65;ReadPosRankSum=2.409;VQSLOD=3.2736;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,14:14:42.13:519,42,0	1/1:0,1:1:3.01:39,3,0	0/0:2,0:2:5.81:0,6,33	0/0:1,0:1:0.89:0,1,2	1/1:0,11:11:20.10:238,20,0	1/1:0,5:5:15.05:194,15,0	1/1:0,7:7:18.06:227,18,0	1/1:0,11:11:29.25:245,29,0	1/1:0,15:15:42.14:543,42,0	1/1:0,10:8:19.74:215,20,0	1/1:0,13:13:30.10:385,30,0	1/1:0,14:14:42.09:513,42,0	1/1:0,10:10:27.09:345,27,0	1/1:0,4:4:12.04:155,12,0	1/1:0,15:15:45.09:548,45,0	1/1:0,16:16:48.14:602,48,0	1/1:0,11:11:19.83:372,20,0	1/1:0,8:8:24.07:290,24,0	1/1:0,3:3:9.03:112,9,0	1/1:0,16:16:44.63:542,45,0	1/1:0,7:7:12:112,12,0	1/1:0,7:6:15.04:183,15,0	1/1:0,7:7:9.03:116,9,0	1/1:1,5:6:9.03:115,9,0	1/1:0,13:13:28.64:353,29,0	1/1:0,12:12:33.11:426,33,0	1/1:0,9:9:27.09:349,27,0	1/1:0,2:2:6.02:78,6,0
chr10	64535462	.	A	AC	7143.60	PASS	AB=0.764;AC=54;AF=0.964;AN=56;BaseQRankSum=-1.147;DP=277;FS=20.564;HRun=3;HaplotypeScore=321.5824;InbreedingCoeff=-0.0604;MQ=55.81;MQ0=0;MQRankSum=-1.946;QD=25.79;ReadPosRankSum=3.494;VQSLOD=0.2849;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,20:21:42.21:447,42,0	1/1:0,2:2:6.02:65,6,0	0/1:2,1:3:31.87:39,0,32	0/1:5,2:7:29.01:80,0,29	1/1:1,13:14:36.02:395,36,0	1/1:0,4:4:12.03:125,12,0	1/1:0,5:5:15.04:168,15,0	1/1:1,14:15:43.66:433,44,0	1/1:1,16:17:50.88:562,51,0	1/1:0,15:13:33.19:325,33,0	1/1:2,10:12:25.71:325,26,0	1/1:3,11:14:29.55:322,30,0	1/1:3,4:7:14.22:153,14,0	1/1:1,2:3:5.38:39,5,0	1/1:1,13:14:35.85:360,36,0	1/1:0,15:15:45.04:446,45,0	1/1:1,6:7:19.61:208,20,0	1/1:0,11:11:27:313,27,0	1/1:1,2:3:8.91:67,9,0	1/1:0,20:20:55.34:565,55,0	1/1:2,2:4:6.27:47,6,0	1/1:0,6:5:12.03:127,12,0	1/1:0,8:8:21.05:223,21,0	1/1:1,7:8:12.03:130,12,0	1/1:2,13:15:33.55:364,34,0	1/1:0,14:14:39.10:434,39,0	1/1:1,10:11:29.26:316,29,0	1/1:0,2:2:6.02:66,6,0
chr10	64535610	.	G	GGCA	5548.33	PASS	AB=0.764;AC=18;AF=0.321;AN=56;BaseQRankSum=11.059;DP=474;FS=18.201;HRun=0;HaplotypeScore=121.7167;InbreedingCoeff=-0.4887;MQ=61.57;MQ0=4;MQRankSum=-10.128;QD=20.40;ReadPosRankSum=-0.871;VQSLOD=3.5110;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:78.22:0,78,1342	0/1:8,2:10:49.51:50,0,296	0/0:23,0:14:32.32:0,32,506	0/0:27,0:18:54.18:0,54,910	0/0:18,0:18:54.14:0,54,920	0/1:5,3:8:99:261,0,138	0/1:12,5:15:99:450,0,178	0/0:16,0:16:48.08:0,48,768	0/0:18,0:18:51.14:0,51,867	0/1:10,10:20:99:693,0,266	0/1:10,9:21:99:438,0,228	0/1:5,1:6:55.64:56,0,196	0/0:12,0:12:36.09:0,36,603	0/0:8,0:8:2.08:0,2,347	0/1:8,2:10:99:117,0,293	0/1:9,1:10:43.49:43,0,395	0/1:9,4:13:99:112,0,392	0/1:7,4:11:99:253,0,287	0/1:13,3:15:99:218,0,387	0/1:14,8:22:99:561,0,369	0/1:12,5:20:99:394,0,147	0/1:16,9:24:99:629,0,319	0/0:14,0:14:39.13:0,39,687	0/0:39,0:39:99:0,99,1714	0/1:16,10:26:99:452,0,328	0/1:8,2:10:99:225,0,238	0/1:10,4:15:99:242,0,435	0/1:6,5:11:99:356,0,231
chr10	64536928	.	G	GATAGA	2914.52	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.979;DP=688;FS=0.587;HRun=0;HaplotypeScore=133.6500;InbreedingCoeff=0.9996;MQ=80.57;MQ0=0;MQRankSum=-8.724;QD=56.05;ReadPosRankSum=-1.123;VQSLOD=3.6621;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,29:33:74.51:1742,75,0	0/0:10,0:10:30.09:0,30,623	0/0:25,0:25:69.06:0,69,1344	0/0:24,0:24:57.19:0,57,1231	0/0:26,0:26:72.25:0,72,1677	0/0:24,0:24:72.25:0,72,1593	0/0:28,0:28:84.27:0,84,1890	1/1:4,15:19:51.18:1295,51,0	0/0:28,0:28:84.27:0,84,1892	0/0:22,0:22:66.23:0,66,1525	0/0:20,0:20:57.20:0,57,1298	0/0:16,0:16:45.15:0,45,1023	0/0:17,0:17:51.18:0,51,1166	0/0:25,0:25:75.22:0,75,1608	0/0:34,0:34:99:0,102,2340	0/0:29,0:29:87.27:0,87,1979	0/0:46,0:46:99:0,138,3160	0/0:14,0:14:42.14:0,42,943	0/0:19,0:19:54.19:0,54,1248	0/0:28,0:28:81.28:0,81,1820	0/0:42,0:42:99:0,120,2714	0/0:16,0:16:48.16:0,48,1105	0/0:17,0:17:51.16:0,51,1143	0/0:26,0:26:78.27:0,78,1795	0/0:27,0:27:81.26:0,81,1822	0/0:34,0:34:93.31:0,93,2120	0/0:28,0:28:78.25:0,78,1713	0/0:11,0:11:33.11:0,33,739
chr10	64536929	.	C	CA	984.68	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=10.750;DP=699;FS=0.549;HRun=0;HaplotypeScore=87.3257;InbreedingCoeff=0.9991;MQ=79.04;MQ0=0;MQRankSum=-10.607;QD=16.14;ReadPosRankSum=-2.387;VQSLOD=4.8733;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,29:34:51.50:566,51,0	0/0:10,0:10:30.09:0,30,402	0/0:24,0:24:68.99:0,69,900	0/0:23,0:23:61.44:0,61,819	0/0:26,0:26:75.23:0,75,1031	0/0:25,0:25:72.24:0,72,1001	0/0:27,0:27:81.27:0,81,1132	1/1:12,15:27:27.95:540,28,0	0/0:28,0:28:84.28:0,84,1174	0/0:22,0:22:66.22:0,66,923	0/0:20,0:20:60.19:0,60,822	0/0:17,0:17:48.14:0,48,652	0/0:17,0:17:51.17:0,51,712	0/0:25,0:25:75.24:0,75,1029	0/0:34,0:34:99:0,102,1426	0/0:29,0:29:87.29:0,87,1215	0/0:47,0:47:99:0,138,1911	0/0:15,0:15:42.14:0,42,584	0/0:20,0:20:54.18:0,54,755	0/0:28,0:28:81.27:0,81,1132	0/0:41,0:41:99:0,123,1695	0/0:16,0:16:48.16:0,48,671	0/0:18,0:18:51.16:0,51,696	0/0:26,0:26:78.26:0,78,1090	0/0:27,0:27:81.27:0,81,1132	0/0:34,0:34:99:0,99,1339	0/0:28,0:28:84.23:0,84,1121	0/0:11,0:11:33.11:0,33,459
chr10	64537043	.	C	CT	20565.41	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-12.652;DP=688;FS=0.391;HRun=3;HaplotypeScore=59.9042;InbreedingCoeff=0.9995;MQ=75.41;MQ0=0;MQRankSum=-3.533;QD=35.89;ReadPosRankSum=2.259;VQSLOD=5.4047;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,36:38:99:1413,102,0	1/1:0,14:14:36.12:504,36,0	0/0:16,0:16:45.02:0,45,483	0/0:14,0:14:33.03:0,33,373	1/1:3,29:32:75.20:1026,75,0	1/1:1,28:29:75.25:1050,75,0	1/1:2,22:24:57.19:798,57,0	1/1:1,34:35:99:1390,102,0	0/0:21,0:21:60.18:0,60,720	1/1:3,29:32:84.25:1139,84,0	1/1:2,16:18:51.15:696,51,0	1/1:0,23:23:63.21:881,63,0	0/0:17,0:17:45.11:0,45,508	1/1:2,25:27:63.21:882,63,0	1/1:0,17:17:42.14:588,42,0	1/1:1,30:31:69.23:966,69,0	1/1:1,27:28:75.25:1050,75,0	1/1:1,27:28:69.23:966,69,0	1/1:2,23:25:69.22:950,69,0	1/1:0,26:26:78.22:1069,78,0	1/1:6,38:44:99:1470,105,0	1/1:0,27:27:69.23:966,69,0	0/0:28,0:28:72.15:0,72,845	0/0:19,0:19:51.13:0,51,590	1/1:0,11:11:27.09:376,27,0	1/1:0,27:27:81.27:1129,81,0	1/1:0,25:25:63.21:882,63,0	1/1:1,11:12:27.09:378,27,0
chr10	64541941	.	G	GA	117.87	PASS	AC=4;AF=0.087;AN=46;BaseQRankSum=-2.694;DP=63;FS=4.479;HRun=1;HaplotypeScore=10.4128;InbreedingCoeff=0.2980;MQ=74.58;MQ0=0;MQRankSum=0.026;QD=11.79;ReadPosRankSum=0.291;VQSLOD=1.7478;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:4:11.89:85,12,0	./.	0/0:2,0:1:3:0,3,27	0/0:2,0:2:2.98:0,3,22	./.	0/0:1,0:1:3:0,3,25	0/0:5,0:5:11.35:0,11,70	1/1:1,5:6:14.98:138,15,0	0/0:1,0:1:1.25:0,1,3	0/0:2,0:2:5.75:0,6,40	./.	0/0:1,0:1:3:0,3,27	0/0:3,0:3:4.25:0,4,30	0/0:1,0:1:2.37:0,2,8	0/0:2,0:2:4.52:0,5,24	0/0:2,0:2:3:0,3,27	0/0:2,0:2:5.91:0,6,38	0/0:3,0:3:2.98:0,3,21	0/0:7,0:7:14.95:0,15,120	0/0:3,0:3:6:0,6,52	0/0:4,0:4:7.52:0,8,50	0/0:1,0:1:3:0,3,27	0/0:2,0:2:2.96:0,3,19	0/0:5,0:5:5.04:0,5,33	0/0:3,0:3:7.75:0,8,45	./.	0/0:1,0:1:3:0,3,26	./.
chr10	64543540	.	A	AC	7149.62	PASS	AB=0.584;AC=42;AF=0.750;AN=56;BaseQRankSum=9.513;DP=346;FS=19.573;HRun=1;HaplotypeScore=72.5098;InbreedingCoeff=0.7260;MQ=41.89;MQ0=23;MQRankSum=-3.320;QD=25.81;ReadPosRankSum=-0.399;VQSLOD=3.3733;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,17:15:23.77:329,24,0	1/1:0,4:2:5.99:65,6,0	0/0:6,0:1:3.01:0,3,33	0/0:7,0:1:3.01:0,3,39	1/1:5,17:20:42.13:590,42,0	1/1:0,14:9:27.09:392,27,0	1/1:2,11:11:24.04:330,24,0	1/1:18,10:14:36:462,36,0	0/0:16,0:16:42.14:0,42,545	1/1:2,7:8:21.07:295,21,0	1/1:1,6:7:18.06:263,18,0	1/1:2,9:9:21.03:284,21,0	0/0:12,0:12:30.10:0,30,389	1/1:2,8:9:17.98:216,18,0	1/1:0,11:9:27.05:370,27,0	0/1:3,11:11:8.76:369,0,9	1/1:0,11:9:24.08:353,24,0	1/1:3,12:12:30.07:411,30,0	1/1:0,11:11:30.10:442,30,0	1/1:1,14:13:21.07:306,21,0	0/1:6,11:15:5.77:408,0,6	1/1:1,5:5:9.03:133,9,0	0/0:8,0:8:21.07:0,21,272	0/0:19,0:18:39.13:0,39,506	1/1:2,6:5:15.05:221,15,0	1/1:1,7:6:15.05:219,15,0	1/1:2,11:11:27.05:367,27,0	1/1:0,10:10:24.04:324,24,0
chr10	64543673	.	TA	T	1866.10	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=4.115;DP=360;FS=7.546;HRun=4;HaplotypeScore=82.3910;InbreedingCoeff=0.7685;MQ=57.97;MQ0=8;MQRankSum=-3.213;QD=23.33;ReadPosRankSum=-0.613;VQSLOD=2.1190;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,20:21:57.17:683,57,0	0/0:2,0:2:6.02:0,6,84	0/0:13,0:5:12:0,12,133	0/1:12,0:6:0.17:0,0,57	1/1:2,28:29:69.21:821,69,0	0/0:26,0:26:75.24:0,75,1029	0/0:4,0:4:12:0,12,146	1/1:2,15:16:42.13:503,42,0	0/0:9,0:9:21.07:0,21,294	0/0:24,0:22:66.21:0,66,904	0/0:11,0:11:27.09:0,27,378	0/0:7,0:7:12.04:0,12,168	0/0:5,0:5:15.05:0,15,209	0/0:6,0:5:9.03:0,9,126	0/0:11,0:11:12.04:0,12,166	0/0:11,0:11:17.06:0,17,250	0/0:22,0:22:63.21:0,63,879	0/0:19,0:19:45.15:0,45,628	0/0:19,0:17:48.16:0,48,668	0/0:7,0:6:15.05:0,15,210	0/0:7,0:7:21.07:0,21,292	0/0:3,0:2:6.02:0,6,84	0/0:5,0:5:15.05:0,15,210	0/0:5,0:5:9.02:0,9,109	0/0:18,0:18:42.14:0,42,588	0/0:18,0:18:45.15:0,45,625	0/0:10,0:10:21.05:0,21,275	0/0:18,0:17:51.17:0,51,714
chr10	64543997	.	A	AGT	2324.95	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-10.352;DP=574;FS=1.208;HRun=0;HaplotypeScore=75.7979;InbreedingCoeff=0.9752;MQ=87.01;MQ0=0;MQRankSum=-2.801;QD=41.52;ReadPosRankSum=0.191;VQSLOD=5.0730;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,34:34:90.31:1617,90,0	0/0:4,0:4:12.04:0,12,168	0/0:28,0:28:69.13:0,69,908	0/0:29,0:26:62.42:0,62,824	0/0:14,0:14:36.12:0,36,503	0/0:28,0:28:78.26:0,78,1087	0/0:20,0:20:54.17:0,54,734	1/1:5,16:22:48.15:829,48,0	0/0:14,0:14:42.14:0,42,583	0/0:11,0:11:24.08:0,24,336	0/0:11,0:11:33.10:0,33,441	0/0:27,0:27:78.20:0,78,1032	0/0:23,0:23:63.17:0,63,858	0/0:19,0:19:54.15:0,54,721	0/0:22,0:22:63.17:0,63,830	0/0:19,0:19:54.16:0,54,722	0/0:26,0:26:72.24:0,72,1006	0/0:21,0:21:63.21:0,63,880	0/0:21,0:21:54.17:0,54,741	0/0:7,0:7:15.05:0,15,208	0/0:30,0:30:84.20:0,84,1084	0/0:17,0:17:45.15:0,45,628	0/0:17,0:17:42.11:0,42,550	0/0:26,0:26:75.23:0,75,1031	0/0:17,0:17:48.14:0,48,652	0/0:19,0:19:54.16:0,54,711	0/0:33,0:33:96.29:0,96,1304	0/0:15,0:15:45.15:0,45,629
chr10	64544577	.	A	ATGATGG	18110.26	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-4.330;DP=710;FS=8.153;HRun=0;HaplotypeScore=158.8713;InbreedingCoeff=0.9795;MQ=56.05;MQ0=9;MQRankSum=-10.712;QD=38.86;ReadPosRankSum=-2.137;VQSLOD=3.7951;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:44:72.22:0,72,1408	1/1:11,3:14:27.08:714,27,0	0/0:37,0:23:10.20:0,10,435	0/0:34,0:22:14.93:0,15,310	1/1:19,0:21:14.69:198,15,0	1/1:17,7:24:39.13:926,39,0	1/1:25,7:32:56.99:1189,57,0	0/0:23,0:23:24.07:0,24,432	0/0:25,0:25:48.13:0,48,917	1/1:7,7:14:33.08:863,33,0	1/1:16,5:21:27.06:561,27,0	1/1:12,20:32:69.15:1904,69,0	0/0:25,0:25:45.12:0,45,841	1/1:19,12:31:45.13:1265,45,0	1/1:11,9:20:42.06:1032,42,0	1/1:18,8:26:45.13:1112,45,0	1/1:17,9:27:45.14:1154,45,0	1/1:14,4:18:28.40:634,28,0	1/1:18,2:19:17.23:312,17,0	1/1:10,8:19:36.05:948,36,0	1/1:33,3:36:21.04:376,21,0	1/1:17,5:22:18.01:495,18,0	0/0:20,0:20:48.15:0,48,947	0/0:34,0:34:75.12:0,75,1341	1/1:12,5:17:15.01:411,15,0	1/1:18,12:30:57.15:1520,57,0	1/1:15,10:26:57.20:1583,57,0	1/1:11,5:16:36.08:912,36,0
chr10	64544639	.	GTT	G	10523.11	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=0.698;DP=670;FS=0.800;HRun=13;HaplotypeScore=119.5991;InbreedingCoeff=0.9854;MQ=67.14;MQ0=3;MQRankSum=-2.853;QD=20.04;ReadPosRankSum=3.382;VQSLOD=4.0527;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,38:45:74.91:827,75,0	1/1:2,5:8:13.85:126,14,0	0/0:37,0:17:27.98:0,28,264	0/0:14,0:10:14.76:0,15,130	1/1:6,0:29:57.45:249,57,0	1/1:0,17:19:35.94:448,36,0	1/1:7,21:29:47.98:515,48,0	1/1:7,25:32:70.21:687,70,0	0/0:7,0:30:43.09:0,43,261	1/1:3,15:18:45.07:436,45,0	1/1:2,17:19:45:436,45,0	1/1:5,19:24:57.02:552,57,0	0/0:19,0:21:59.66:0,60,793	1/1:2,17:20:42:457,42,0	1/1:4,20:27:26.72:459,27,0	1/1:5,20:26:56.76:533,57,0	1/1:6,19:27:44.52:518,45,0	1/1:5,15:20:41.79:390,42,0	1/1:2,9:13:11.82:203,12,0	1/1:7,16:23:44.91:427,45,0	1/1:4,17:22:42.02:407,42,0	1/1:3,23:26:66.07:638,66,0	0/0:18,0:19:47.62:0,48,616	0/0:21,0:24:57.97:0,58,742	1/1:5,13:19:44.50:401,44,0	1/1:5,21:28:68.55:635,69,0	1/1:3,23:26:60.01:629,60,0	1/1:2,21:23:57.09:551,57,0
chr10	64545215	.	GA	G	400.76	PASS	AB=0.862;AC=12;AF=0.214;AN=56;BaseQRankSum=1.100;DP=518;FS=1.733;HRun=15;HaplotypeScore=95.4233;InbreedingCoeff=0.0832;MQ=62.45;MQ0=4;MQRankSum=0.887;QD=2.21;ReadPosRankSum=4.210;VQSLOD=-0.1722;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:13,15:30:27.86:287,28,0	0/1:5,1:7:3.64:4,0,75	0/0:11,0:10:0.70:0,1,21	0/0:19,0:12:6:0,6,52	1/1:7,6:16:20.74:113,21,0	0/0:15,2:19:8.14:0,8,216	0/0:19,1:21:2.85:0,3,179	0/0:20,2:21:21.92:0,22,298	0/1:13,1:14:10.26:10,0,149	0/1:19,3:22:27.84:28,0,146	0/0:9,0:9:17.92:0,18,143	0/0:13,0:15:17.97:0,18,124	0/0:15,1:17:0.24:0,0,217	0/0:11,1:12:4.63:0,5,146	0/0:17,0:17:29.94:0,30,251	0/0:26,0:29:59.77:0,60,496	0/0:24,1:26:21.90:0,22,328	0/1:9,5:15:10.28:80,0,10	0/0:21,2:20:0.39:0,0,228	0/1:19,2:21:2.60:3,0,213	0/1:10,1:11:3.38:3,0,91	0/1:16,4:21:6.27:6,0,216	0/0:17,0:18:26.69:0,27,325	0/0:18,0:18:32.98:0,33,287	0/1:20,3:24:6.40:6,0,214	0/0:22,0:22:41.88:0,42,352	0/0:21,3:24:0.34:0,0,224	0/0:8,0:9:11.16:0,11,126
chr10	64546092	.	CCTCTCTCTCTCTCTCTCTCTCTCT	C	2158.03	PASS	AB=1.000;AC=17;AF=0.425;AN=40;BaseQRankSum=3.657;DP=460;FS=1.089;HRun=0;HaplotypeScore=223.4010;InbreedingCoeff=0.4681;MQ=58.78;MQ0=29;MQRankSum=-2.283;QD=16.23;ReadPosRankSum=1.886;VQSLOD=2.7304;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:19:18.06:0,18,1173	./.	./.	0/0:26,0:7:3.01:0,3,41	0/0:21,0:20:6.02:0,6,339	./.	./.	0/0:30,0:26:8.20:0,8,218	0/0:10,0:7:12.04:0,12,719	1/1:20,0:21:27.08:903,27,0	./.	1/1:7,0:7:3.01:171,3,0	0/0:10,0:8:6.02:0,6,379	./.	./.	1/1:11,0:10:6:72,6,0	0/0:15,4:18:1.25:0,1,3	0/1:15,0:14:92.81:93,0,206	1/1:16,0:14:0.63:291,1,0	0/0:7,14:21:2.60:0,3,119	1/1:27,0:26:6.56:211,7,0	1/1:11,2:14:2.80:49,3,0	0/0:18,0:18:3.01:0,3,159	0/0:23,0:20:24.08:0,24,1185	./.	0/0:14,0:14:2.37:0,2,8	1/1:7,2:12:9.01:320,9,0	1/1:6,1:5:3.01:186,3,0
chr10	64546121	.	CTCTCTCTCTCTCTCTCTCTCTCTCTGTG	C	5308.80	PASS	AB=1.000;AC=31;AF=0.596;AN=52;BaseQRankSum=2.075;DP=432;FS=12.636;HRun=0;HaplotypeScore=207.8367;InbreedingCoeff=0.5219;MQ=41.33;MQ0=48;MQRankSum=2.985;QD=18.12;ReadPosRankSum=-2.362;VQSLOD=2.6063;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:18:9.69:0,10,1299	1/1:9,0:8:6.62:132,7,0	./.	0/0:10,0:2:3.01:0,3,41	0/0:13,0:12:12.04:0,12,592	1/1:15,0:14:3.01:46,3,0	0/1:14,0:12:0:0,0,0	0/0:18,0:17:27.50:0,28,899	0/0:15,0:12:21.54:0,22,960	1/1:10,19:28:54.28:1425,54,0	1/1:12,0:11:9.03:137,9,0	1/1:4,11:14:3.01:219,3,0	0/0:10,0:8:12.04:0,12,709	./.	1/1:9,0:9:15.05:227,15,0	0/1:15,0:12:1.51:223,0,2	0/1:20,0:14:3.56:83,0,4	0/1:13,0:12:99:268,0,241	1/1:7,0:14:21.67:647,22,0	0/1:22,0:21:39.27:39,0,115	1/1:22,0:18:16.77:314,17,0	1/1:15,0:14:4.55:85,5,0	0/0:10,0:9:3.01:0,3,159	0/0:29,0:26:51.17:0,51,1945	1/1:12,0:11:9.03:177,9,0	1/1:23,0:21:29.82:505,30,0	1/1:16,0:15:21.03:483,21,0	1/1:14,0:9:12.01:300,12,0
chr10	64546231	.	C	CTT	7842.19	PASS	AB=0.716;AC=43;AF=0.768;AN=56;BaseQRankSum=2.411;DP=467;FS=4.823;HRun=12;HaplotypeScore=97.5658;InbreedingCoeff=0.7275;MQ=64.68;MQ0=4;MQRankSum=-3.842;QD=19.61;ReadPosRankSum=-2.459;VQSLOD=3.7972;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,1:21:41.93:381,42,0	0/1:3,6:10:1.22:255,0,1	0/1:11,0:10:0.57:1,0,68	0/0:8,0:7:2.93:0,3,26	0/1:4,0:19:3.24:82,0,3	1/1:8,12:20:26.99:334,27,0	1/1:7,11:19:19.62:344,20,0	1/1:13,2:21:34.28:357,34,0	0/0:13,0:12:17.90:0,18,161	1/1:17,13:31:68.94:778,69,0	1/1:10,10:23:24.66:481,25,0	1/1:8,6:14:29.96:354,30,0	0/0:6,0:7:8.94:0,9,130	1/1:3,7:11:21.74:225,22,0	1/1:7,5:13:29.54:309,30,0	1/1:5,12:18:35.42:383,35,0	1/1:3,16:20:39.05:492,39,0	1/1:7,10:17:30.82:395,31,0	1/1:6,8:13:24.07:321,24,0	1/1:8,10:21:37.96:400,38,0	1/1:3,3:6:0.89:2,1,0	1/1:7,9:16:8.71:391,9,0	0/0:14,0:14:36.01:0,36,333	0/0:22,0:24:35.72:0,36,377	1/1:2,8:11:23.52:280,24,0	1/1:8,12:24:58.98:638,59,0	1/1:11,10:19:38.98:465,39,0	1/1:5,5:12:15.01:176,15,0
chr10	64546985	.	C	CTT	2139.37	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=0.000;DP=636;FS=13.236;HRun=11;HaplotypeScore=87.4140;InbreedingCoeff=0.8563;MQ=65.96;MQ0=1;MQRankSum=1.143;QD=15.50;ReadPosRankSum=-1.023;VQSLOD=0.7203;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,45:54:99:1494,106,0	0/0:13,0:13:26.95:0,27,262	0/0:17,0:14:14.95:0,15,136	0/1:10,0:8:18.24:18,0,29	1/1:5,0:26:38.37:140,38,0	0/0:19,0:20:51.03:0,51,495	0/0:18,0:19:47.78:0,48,448	1/1:12,3:30:57.11:610,57,0	1/1:7,0:17:11.80:39,12,0	0/0:18,0:18:42.02:0,42,407	0/0:14,0:14:30:0,30,291	0/0:24,0:24:56.99:0,57,547	0/0:15,0:15:32.98:0,33,320	0/0:26,0:26:72.07:0,72,685	0/0:27,0:29:56.95:0,57,596	0/0:23,0:23:41.95:0,42,401	0/0:26,0:27:59.98:0,60,618	0/0:19,0:22:50.19:0,50,428	0/0:29,0:32:74.24:0,74,670	0/0:14,0:16:41.49:0,41,367	0/0:25,0:25:57.02:0,57,546	0/0:21,0:22:35.66:0,36,326	0/0:18,0:19:50.54:0,51,460	0/0:24,0:26:56.67:0,57,575	0/0:21,0:21:41.96:0,42,407	0/0:22,0:23:56.74:0,57,531	0/0:25,0:25:44.87:0,45,427	0/0:21,0:22:50.70:0,51,477
chr10	64547197	.	A	ATAAAAAGATTCTGATAGCTTGTC	2779.87	PASS	AB=0.667;AC=35;AF=0.972;AN=36;BaseQRankSum=-2.075;DP=53;FS=3.144;HRun=0;HaplotypeScore=36.5605;InbreedingCoeff=-0.1893;MQ=130.77;MQ0=0;MQRankSum=-1.999;QD=55.60;ReadPosRankSum=-0.792;VQSLOD=1.6597;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	1/1:3,1:7:15.05:854,15,0	0/1:3,0:6:38.90:941,0,39	./.	1/1:2,0:2:3.01:49,3,0	./.	1/1:2,0:2:3.01:47,3,0	./.	1/1:1,0:1:3.01:66,3,0	./.	1/1:2,0:3:6.02:176,6,0	1/1:1,0:1:3.01:73,3,0	1/1:1,0:1:3.01:74,3,0	1/1:1,0:1:3.01:54,3,0	1/1:2,0:2:3:25,3,0	./.	1/1:3,0:4:3.01:47,3,0	1/1:2,0:2:6.02:97,6,0	1/1:1,0:1:3.01:42,3,0	1/1:3,0:3:3:25,3,0	1/1:2,0:3:3.01:95,3,0	1/1:1,0:1:3.01:57,3,0	./.	1/1:2,0:2:2.99:23,3,0	./.	./.	1/1:8,0:8:14.96:120,15,0
chr10	64553280	.	A	AGAGGTTTAAGCGCTCCG	49001.87	PASS	AB=0.607;AC=41;AF=0.732;AN=56;BaseQRankSum=-6.913;DP=476;FS=2.658;HRun=0;HaplotypeScore=171.5723;InbreedingCoeff=0.8864;MQ=85.51;MQ0=0;MQRankSum=-14.952;QD=162.80;ReadPosRankSum=3.970;VQSLOD=5.3262;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,10:25:48.16:3544,48,0	1/1:1,4:7:15.05:1103,15,0	0/0:25,0:24:66.20:0,66,2325	0/0:34,0:34:93.27:0,93,3695	0/0:24,0:24:69.22:0,69,3028	1/1:1,5:9:18.06:1527,18,0	1/1:12,6:25:51.18:3951,51,0	1/1:23,0:23:66.22:3917,66,0	0/0:26,0:26:75.24:0,75,3623	1/1:7,8:22:57.15:3615,57,0	1/1:3,6:11:27.09:1849,27,0	1/1:6,5:12:33.11:2194,33,0	0/0:19,0:19:54.16:0,54,2224	1/1:3,5:14:23.87:1688,24,0	1/1:3,6:11:27.09:2118,27,0	0/1:6,7:17:99:2497,0,115	1/1:5,8:26:39.13:2971,39,0	1/1:4,1:7:12.04:1020,12,0	1/1:6,7:18:51.10:2854,51,0	1/1:1,3:7:9.03:762,9,0	1/1:3,3:9:15.05:1021,15,0	1/1:4,6:10:30.10:2252,30,0	0/0:23,0:23:66.21:0,66,2995	0/0:24,0:24:72.23:0,72,3298	1/1:2,10:13:33.11:2714,33,0	1/1:4,8:16:48.16:3131,48,0	1/1:6,4:11:30.57:2236,31,0	1/1:2,6:8:24.08:2038,24,0
chr10	64555157	.	AC	A	8988.99	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=14.531;DP=459;FS=16.118;HRun=4;HaplotypeScore=96.2018;InbreedingCoeff=0.9741;MQ=78.05;MQ0=0;MQRankSum=-3.534;QD=33.05;ReadPosRankSum=3.006;VQSLOD=3.4304;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:81.19:0,81,1107	1/1:1,3:4:9.03:108,9,0	0/0:25,0:23:66.19:0,66,880	0/0:25,0:23:29.69:0,30,577	0/0:16,0:16:42.10:0,42,537	1/1:1,13:14:39.12:468,39,0	1/1:0,27:27:78.24:935,78,0	0/0:35,0:35:93.19:0,93,1215	0/0:10,0:10:27.09:0,27,378	1/1:0,13:13:39.12:466,39,0	1/1:0,14:14:39.12:465,39,0	1/1:0,4:4:12.04:143,12,0	0/0:11,0:11:33.11:0,33,462	1/1:0,9:8:18.06:216,18,0	1/1:0,19:19:57.17:682,57,0	1/1:0,12:12:36.11:432,36,0	1/1:3,16:18:51.15:606,51,0	1/1:2,10:12:30.09:360,30,0	1/1:0,22:22:66.19:782,66,0	1/1:0,7:7:21.06:251,21,0	1/1:3,22:25:60.18:719,60,0	1/1:1,4:5:9.03:108,9,0	0/0:12,0:12:36.12:0,36,503	0/0:22,0:22:57.19:0,57,795	1/1:0,10:10:30.09:357,30,0	1/1:0,29:29:87.24:1029,87,0	1/1:2,17:19:51.16:612,51,0	1/1:0,8:8:21.06:252,21,0
chr10	64555200	.	CTCTTTTT	C	3772.69	PASS	AB=0.889;AC=35;AF=0.625;AN=56;BaseQRankSum=10.754;DP=323;FS=18.691;HRun=0;HaplotypeScore=99.2718;InbreedingCoeff=0.7909;MQ=66.93;MQ0=5;MQRankSum=-4.465;QD=23.29;ReadPosRankSum=5.749;VQSLOD=1.5556;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:42.05:0,42,759	1/1:2,0:4:9.89:95,10,0	0/0:22,0:9:3.62:0,4,157	0/0:17,0:10:20.93:0,21,300	0/0:17,0:17:41.49:0,41,734	1/1:9,3:14:23.19:297,23,0	1/1:7,2:10:24.17:248,24,0	0/0:24,0:23:49.92:0,50,845	0/0:8,0:7:17.31:0,17,175	1/1:7,3:11:29.77:384,30,0	1/1:3,1:4:4.44:85,4,0	1/1:5,1:6:9.51:134,10,0	0/0:10,0:10:21.02:0,21,367	1/1:1,0:1:2.88:15,3,0	1/1:8,1:10:23.55:282,24,0	1/1:7,1:7:15:146,15,0	1/1:8,1:9:15.16:132,15,0	0/1:7,1:8:1.87:144,0,2	1/1:10,2:12:22.12:293,22,0	1/1:5,2:7:13.69:106,14,0	1/1:13,2:16:20.31:212,20,0	0/0:1,2:2:0:0,0,0	0/0:9,0:9:21:0,21,294	0/0:17,0:17:33.39:0,33,547	1/1:4,1:5:0.83:139,1,0	1/1:15,4:19:48.98:677,49,0	1/1:5,1:6:13.01:155,13,0	1/1:5,3:8:17.98:229,18,0
chr10	64555201	.	TC	T	2190.71	PASS	AB=1.000;AC=35;AF=0.648;AN=54;BaseQRankSum=9.149;DP=323;FS=7.552;HRun=1;HaplotypeScore=76.6269;InbreedingCoeff=0.8366;MQ=64.85;MQ0=9;MQRankSum=-6.693;QD=13.78;ReadPosRankSum=0.612;VQSLOD=2.3656;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:20.50:0,21,225	1/1:4,0:4:10.15:68,10,0	0/0:24,0:8:3.32:0,3,112	0/0:16,0:9:20.71:0,21,166	0/0:16,1:17:9.03:0,9,175	1/1:14,0:14:26.15:181,26,0	1/1:11,0:10:25.66:184,26,0	0/0:23,0:22:33.87:0,34,338	0/0:10,0:9:14.56:0,15,113	1/1:12,0:11:28.44:185,28,0	1/1:4,0:4:5.90:41,6,0	1/1:6,0:6:15.76:88,16,0	0/0:9,1:10:14.80:0,15,110	1/1:1,0:1:1.55:4,2,0	1/1:11,0:10:22.31:150,22,0	1/1:7,0:5:14.60:105,15,0	1/1:10,0:9:17.40:118,17,0	0/1:7,0:7:1.39:78,0,1	1/1:13,0:11:24.47:193,24,0	1/1:7,0:7:13.50:96,13,0	1/1:15,0:15:24.55:185,25,0	./.	0/0:10,0:10:17.17:0,17,136	0/0:19,0:19:15.83:0,16,229	1/1:5,0:5:11.65:83,12,0	1/1:18,1:19:52.32:414,52,0	1/1:6,0:6:14.83:95,15,0	1/1:7,0:7:14.94:122,15,0
chr10	64555228	.	C	CT	3516.01	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=7.602;DP=389;FS=11.139;HRun=2;HaplotypeScore=78.1392;InbreedingCoeff=0.8228;MQ=35.47;MQ0=12;MQRankSum=-8.145;QD=14.29;ReadPosRankSum=2.995;VQSLOD=2.0620;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:37.27:0,37,427	1/1:3,5:7:12.04:148,12,0	0/0:24,0:4:11.04:0,11,102	0/0:13,0:1:2.84:0,3,14	0/0:12,0:12:11.25:0,11,118	1/1:7,4:11:12.92:152,13,0	1/1:9,7:13:17.96:227,18,0	0/0:18,0:17:40.05:0,40,512	0/0:11,0:11:24.06:0,24,282	1/1:10,11:18:4.82:311,5,0	1/1:3,3:6:5.95:76,6,0	1/1:1,6:7:9.03:112,9,0	0/0:13,0:13:19.30:0,19,223	1/1:6,9:13:21.07:264,21,0	1/1:4,10:13:24.55:304,25,0	1/1:5,10:14:18.37:221,18,0	1/1:6,11:16:17.67:208,18,0	1/1:6,9:14:15.53:140,16,0	1/1:10,8:15:19.28:254,19,0	1/1:4,4:8:5.98:58,6,0	1/1:4,7:10:6.02:76,6,0	1/1:4,12:14:22:257,22,0	0/0:5,0:5:9.03:0,9,106	0/0:17,0:17:18.79:0,19,227	1/1:10,9:17:21.07:266,21,0	1/1:9,8:17:24.55:303,25,0	1/1:4,3:7:10.22:112,10,0	1/1:4,1:5:3:29,3,0
chr10	64556392	.	AC	A	17046.04	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=13.832;DP=686;FS=0.305;HRun=1;HaplotypeScore=99.2198;InbreedingCoeff=0.9999;MQ=67.17;MQ0=1;MQRankSum=-4.357;QD=38.05;ReadPosRankSum=3.066;VQSLOD=5.0956;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:45.15:0,45,713	1/1:0,12:12:33.11:462,33,0	0/0:26,0:23:66.10:0,66,1021	0/0:23,0:20:48.16:0,48,735	0/0:46,0:46:99:0,138,2199	1/1:0,26:26:72.24:1007,72,0	1/1:0,13:13:39.13:546,39,0	0/0:34,0:34:99:0,99,1537	0/0:26,0:26:78.27:0,78,1240	1/1:0,35:35:99:1394,102,0	1/1:0,18:18:48.03:605,48,0	1/1:0,27:27:75.22:1028,75,0	0/0:20,0:20:60.20:0,60,955	1/1:0,18:18:54.15:734,54,0	1/1:0,26:26:66.22:923,66,0	1/1:1,15:16:45.15:628,45,0	1/1:0,20:20:57.16:775,57,0	1/1:0,26:26:66.22:923,66,0	1/1:0,15:15:39.12:530,39,0	1/1:0,27:27:75.16:1005,75,0	1/1:0,29:29:72.24:1007,72,0	1/1:0,28:28:78.22:1069,78,0	0/0:14,0:14:42.13:0,42,648	0/0:19,0:19:54.18:0,54,859	1/1:0,20:20:51.17:713,51,0	1/1:0,40:40:99:1657,120,0	1/1:0,35:35:99:1385,99,0	1/1:0,17:17:48.15:655,48,0
chr10	64556443	.	G	GTCTATCTA	7595.34	PASS	AB=0.937;AC=38;AF=0.679;AN=56;BaseQRankSum=1.459;DP=617;FS=0.963;HRun=0;HaplotypeScore=251.6989;InbreedingCoeff=0.6077;MQ=64.17;MQ0=4;MQRankSum=-2.249;QD=16.30;ReadPosRankSum=-4.075;VQSLOD=3.2219;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:2,0:29:8.17:0,8,145	1/1:8,1:9:7.24:124,7,0	0/0:20,0:17:12.69:0,13,474	0/0:13,0:11:14.57:0,15,308	0/0:29,0:29:63.70:0,64,759	1/1:21,0:23:27.32:294,27,0	1/1:11,0:12:8.92:68,9,0	0/1:21,0:21:11.01:19,0,11	0/1:27,0:27:5.08:5,0,647	0/1:29,4:33:9:815,0,9	1/1:17,0:17:14.68:283,15,0	1/1:15,0:25:45.95:513,46,0	0/0:25,0:25:69.17:0,69,1298	1/1:15,0:15:7.30:149,7,0	1/1:20,9:29:30.53:995,31,0	1/1:13,2:15:13.93:316,14,0	0/1:20,3:23:21.04:541,0,21	1/1:25,0:25:23.53:271,24,0	1/1:16,0:16:17.06:213,17,0	1/1:17,8:24:6.40:595,6,0	1/1:22,0:25:30.45:312,30,0	1/1:24,0:25:2.55:123,3,0	0/0:13,0:12:27.75:0,28,316	0/0:22,0:21:39.08:0,39,373	1/1:15,0:16:19.72:228,20,0	1/1:30,5:35:43.58:959,44,0	1/1:32,5:37:24.64:650,25,0	1/1:11,0:11:12.12:121,12,0
chr10	64556447	.	G	GTCTA	6488.52	PASS	AB=0.705;AC=43;AF=0.860;AN=50;BaseQRankSum=1.175;DP=613;FS=0.775;HRun=0;HaplotypeScore=211.2350;InbreedingCoeff=0.5352;MQ=60.23;MQ0=4;MQRankSum=-1.643;QD=13.46;ReadPosRankSum=-0.446;VQSLOD=4.3860;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:0.99:0,1,74	1/1:9,0:9:6.01:74,6,0	./.	./.	0/1:18,13:31:26.70:334,0,27	1/1:23,0:22:27.04:471,27,0	1/1:11,0:11:6.01:62,6,0	./.	0/0:26,0:26:11.03:0,11,278	1/1:32,0:32:32.59:509,33,0	1/1:18,0:18:12.01:148,12,0	1/1:25,0:25:45.11:894,45,0	0/0:24,0:24:36.05:0,36,465	1/1:14,0:14:3:25,3,0	1/1:27,0:27:26.79:483,27,0	1/1:16,0:16:9.01:128,9,0	1/1:23,0:22:12.03:369,12,0	1/1:26,0:26:20.93:207,21,0	1/1:18,0:18:15.48:175,15,0	1/1:25,0:24:14.45:260,14,0	1/1:26,0:26:20.97:345,21,0	1/1:24,0:24:3.01:54,3,0	1/1:9,4:13:8.86:211,9,0	1/1:7,15:21:24.08:563,24,0	1/1:15,0:15:14.86:264,15,0	1/1:34,0:34:30.08:453,30,0	1/1:37,0:37:20.75:368,21,0	1/1:12,0:12:8.99:94,9,0
chr10	64556891	.	T	TTTA	398.60	PASS	AB=1.000;AC=22;AF=0.611;AN=36;BaseQRankSum=3.664;DP=147;FS=22.353;HRun=0;HaplotypeScore=15.9072;InbreedingCoeff=0.3386;MQ=46.80;MQ0=43;MQRankSum=-3.038;QD=7.67;ReadPosRankSum=-3.595;VQSLOD=-0.0685;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:20,0:17:21.69:22,0,449	./.	0/0:18,0:4:5.48:0,5,70	0/0:18,0:7:11.13:0,11,174	0/0:10,0:10:18.06:0,18,326	1/1:3,0:2:3.01:37,3,0	1/1:3,0:3:3.01:52,3,0	0/0:28,0:15:45.15:0,45,822	0/0:5,0:3:6.02:0,6,109	1/1:1,0:1:3.01:39,3,0	1/1:2,0:1:3.01:39,3,0	./.	0/1:5,0:5:23.72:24,0,190	./.	1/1:3,0:2:6.02:78,6,0	1/1:3,0:2:3.01:39,3,0	./.	1/1:1,5:5:6.02:118,6,0	./.	1/1:3,0:1:2.97:20,3,0	1/1:1,0:1:2.98:22,3,0	./.	0/0:1,0:1:3.01:0,3,55	./.	./.	1/1:2,0:1:3.01:41,3,0	./.	./.
chr10	64557071	.	GTA	G	929.97	PASS	AB=1.000;AC=29;AF=0.690;AN=42;BaseQRankSum=-0.771;DP=263;FS=11.254;HRun=0;HaplotypeScore=51.9187;InbreedingCoeff=0.5782;MQ=29.84;MQ0=95;MQRankSum=-2.918;QD=6.99;ReadPosRankSum=1.909;VQSLOD=1.2469;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:21,0:15:0.60:1,0,1	1/1:3,1:4:5.96:49,6,0	./.	0/0:32,0:3:6.41:0,6,42	0/0:11,0:10:5.40:0,5,16	1/1:11,0:11:5.82:33,6,0	./.	0/0:15,0:8:6.52:0,7,79	0/0:6,0:6:5.30:0,5,17	1/1:5,0:5:14.90:112,15,0	1/1:7,3:7:2.96:19,3,0	./.	0/0:2,0:2:3.01:0,3,55	./.	1/1:5,2:7:8.94:78,9,0	1/1:3,2:5:5.80:61,6,0	1/1:11,1:6:11.78:81,12,0	1/1:3,0:1:2.94:18,3,0	1/1:8,0:7:20.80:147,21,0	1/1:8,1:8:5.79:35,6,0	./.	./.	./.	0/0:9,0:6:3.01:0,3,55	1/1:10,1:11:11.82:84,12,0	1/1:8,1:8:23.86:184,24,0	1/1:12,3:12:13.91:125,14,0	1/1:3,0:3:5.93:40,6,0
chr10	64557074	.	TACAC	T	399.05	PASS	AB=0.994;AC=17;AF=0.447;AN=38;BaseQRankSum=3.649;DP=268;FS=0.000;HRun=0;HaplotypeScore=59.6130;InbreedingCoeff=0.0875;MQ=29.93;MQ0=95;MQRankSum=-1.919;QD=3.33;ReadPosRankSum=-1.422;VQSLOD=1.2944;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:22,1:16:38.21:38,0,46	0/1:4,0:4:13.95:21,0,14	./.	./.	1/1:4,5:10:9.02:103,9,0	0/0:12,0:12:5.90:0,6,36	./.	0/0:17,0:8:9.14:0,9,49	1/1:0,5:6:9.02:121,9,0	0/0:5,0:5:5.97:0,6,46	1/1:9,0:6:2.86:15,3,0	./.	0/0:2,0:2:3.01:0,3,71	./.	0/1:7,0:7:8.94:45,0,9	1/1:5,0:5:5.99:54,6,0	0/1:12,0:7:13.96:21,0,14	./.	0/0:8,0:7:8.92:0,9,62	0/0:10,0:9:2.97:0,3,20	0/1:7,0:2:0:0,0,0	./.	./.	0/0:9,0:7:8.98:0,9,156	0/1:12,0:12:17.84:18,0,29	1/1:10,0:9:2.99:27,3,0	0/1:14,0:11:25.93:66,0,26	./.
chr10	64557107	.	ACACACACGCACG	A	2534.64	PASS	AC=32;AF=0.640;AN=50;BaseQRankSum=8.335;DP=302;FS=8.767;HRun=0;HaplotypeScore=95.1343;InbreedingCoeff=0.7519;MQ=33.86;MQ0=56;MQRankSum=-4.244;QD=19.65;ReadPosRankSum=0.842;VQSLOD=0.9981;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:19:30.07:0,30,636	1/1:3,1:4:3.01:97,3,0	0/0:36,0:11:31.97:0,32,599	0/0:39,0:9:24.04:0,24,433	0/0:13,0:12:15.05:0,15,299	1/1:14,0:14:6.36:67,6,0	1/1:3,1:3:9.03:134,9,0	0/0:32,0:26:64.39:0,64,1257	0/0:8,0:8:15.05:0,15,292	1/1:8,0:6:9.03:148,9,0	1/1:5,2:5:3.01:86,3,0	1/1:4,0:4:3.01:33,3,0	0/0:7,0:7:15.05:0,15,355	./.	1/1:7,1:8:9.50:230,10,0	1/1:3,2:4:9.03:245,9,0	1/1:9,1:9:15.01:243,15,0	1/1:5,0:5:15.05:208,15,0	1/1:7,0:6:9.97:153,10,0	1/1:6,1:6:3.01:51,3,0	1/1:7,0:2:0.47:1,0,0	./.	0/0:2,0:1:3.01:0,3,154	0/0:8,0:7:15.05:0,15,592	1/1:13,1:14:9.50:199,10,0	1/1:9,1:10:21.07:365,21,0	1/1:12,3:14:24.05:458,24,0	./.
chr10	64557141	.	AT	A	5346.41	PASS	AC=36;AF=0.667;AN=54;BaseQRankSum=10.165;DP=260;FS=8.822;HRun=1;HaplotypeScore=68.9016;InbreedingCoeff=0.8874;MQ=65.22;MQ0=1;MQRankSum=-6.480;QD=36.62;ReadPosRankSum=2.334;VQSLOD=4.9898;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:63.21:0,63,974	1/1:0,5:5:12.01:146,12,0	0/0:14,1:11:5.93:0,6,279	0/0:11,0:8:16.65:0,17,220	0/0:15,0:15:30.09:0,30,455	1/1:1,15:16:42.14:573,42,0	1/1:0,4:4:8.99:104,9,0	0/0:27,0:27:81.25:0,81,1188	0/0:7,0:7:18.06:0,18,284	1/1:0,9:9:21.05:262,21,0	1/1:0,9:8:23.56:297,24,0	1/1:0,4:4:12.04:167,12,0	0/0:7,0:7:18.01:0,18,258	1/1:0,2:2:6.02:84,6,0	1/1:0,7:7:21.03:271,21,0	1/1:0,7:7:21.07:285,21,0	1/1:1,12:13:38.61:506,39,0	1/1:0,7:7:21.07:287,21,0	1/1:0,13:13:39.13:545,39,0	1/1:0,4:4:12.04:168,12,0	1/1:0,2:2:6.02:84,6,0	./.	0/0:2,0:2:6.02:0,6,83	0/0:5,0:5:9.03:0,9,140	1/1:0,7:7:21.02:267,21,0	1/1:0,15:15:45.13:594,45,0	1/1:0,17:17:45.12:602,45,0	1/1:5,0:4:12:105,12,0
chr10	64557439	.	GAAA	G	986.67	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=-1.951;DP=437;FS=1.331;HRun=17;HaplotypeScore=76.0123;InbreedingCoeff=0.7307;MQ=49.55;MQ0=10;MQRankSum=-0.326;QD=11.89;ReadPosRankSum=0.413;VQSLOD=0.6013;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:15,15:32:37.41:539,37,0	0/0:5,0:8:23.95:0,24,270	0/1:15,0:2:5.27:5,0,46	0/0:13,0:4:7.83:0,8,69	0/0:16,0:16:13.75:0,14,81	0/0:20,0:21:38.79:0,39,520	0/0:17,0:18:31.23:0,31,397	1/1:8,25:35:57.40:567,57,0	0/0:17,0:17:38.99:0,39,518	0/0:11,0:13:33:0,33,364	0/0:13,0:12:26.83:0,27,324	0/0:12,0:10:9.72:0,10,311	0/0:16,0:17:35.94:0,36,398	0/0:11,0:12:24.31:0,24,327	0/0:9,0:9:23.95:0,24,297	0/0:9,0:8:21.02:0,21,304	0/0:22,0:27:62.10:0,62,699	0/0:7,0:13:21.04:0,21,270	0/0:24,0:27:59.79:0,60,640	0/0:8,0:8:9.86:0,10,125	0/0:9,0:9:19.38:0,19,214	0/0:4,0:7:17.70:0,18,148	0/0:4,0:5:11.32:0,11,80	0/0:20,0:22:54.18:0,54,882	0/0:10,0:12:24.04:0,24,357	0/0:16,0:18:31.05:0,31,336	0/0:15,0:16:41.83:0,42,466	0/0:8,0:7:18.53:0,19,306
chr10	64558720	.	CT	C	21430.73	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=9.703;DP=744;FS=1.135;HRun=2;HaplotypeScore=74.2285;InbreedingCoeff=0.9961;MQ=85.26;MQ0=0;MQRankSum=-7.266;QD=35.25;ReadPosRankSum=3.374;VQSLOD=5.3576;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,63:63:99:2181,169,0	1/1:0,10:10:27.09:351,27,0	0/0:26,0:26:69.70:0,70,1027	0/0:19,0:19:54.14:0,54,761	1/1:1,30:31:84.27:1090,84,0	1/1:0,25:25:72.23:935,72,0	1/1:1,24:25:54.18:701,54,0	1/1:0,27:27:81.25:1038,81,0	1/1:1,31:32:90.29:1169,90,0	1/1:0,37:37:99:1441,111,0	1/1:1,22:23:51.17:662,51,0	1/1:1,19:20:45.14:583,45,0	0/0:24,0:24:69.23:0,69,1028	1/1:0,22:22:63.20:818,63,0	1/1:1,34:35:90.29:1169,90,0	1/1:0,27:27:72.23:935,72,0	1/1:1,29:30:81.26:1052,81,0	1/1:0,16:16:42.14:545,42,0	1/1:0,19:19:57.17:725,57,0	1/1:0,24:24:69.22:896,69,0	1/1:1,33:34:87.28:1130,87,0	1/1:0,32:32:90.29:1168,90,0	0/0:29,0:29:84.27:0,84,1237	0/0:38,0:38:99:0,114,1688	1/1:1,17:18:51.17:662,51,0	1/1:0,28:28:84.27:1088,84,0	1/1:0,25:25:69.22:896,69,0	1/1:0,5:5:15.05:195,15,0
chr10	64558976	.	CTG	C	7633.96	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=9.508;DP=585;FS=10.570;HRun=0;HaplotypeScore=135.3292;InbreedingCoeff=0.9248;MQ=60.17;MQ0=2;MQRankSum=2.290;QD=20.58;ReadPosRankSum=4.011;VQSLOD=4.8774;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:38:20.74:0,21,169	0/0:2,2:4:0:0,0,0	0/0:37,0:24:8.44:0,8,320	0/0:36,0:24:26.33:0,26,447	1/1:7,18:25:27.08:320,27,0	1/1:5,10:15:33.08:378,33,0	1/1:8,12:20:27.08:320,27,0	0/0:15,0:26:47.96:0,48,503	1/1:4,15:19:30.09:355,30,0	1/1:4,11:15:33.10:391,33,0	1/1:3,9:12:18.05:213,18,0	1/1:5,9:14:30.09:352,30,0	0/0:10,0:10:24.04:0,24,320	1/1:3,12:15:36.11:425,36,0	1/1:7,17:24:36.11:426,36,0	1/1:4,11:16:35.94:405,36,0	1/1:9,23:31:63.19:746,63,0	1/1:5,7:12:8.54:250,9,0	1/1:14,4:18:18.05:212,18,0	1/1:5,8:13:33.05:355,33,0	1/1:17,20:37:40.97:652,41,0	1/1:4,21:25:48.15:568,48,0	0/0:23,0:23:51.15:0,51,771	0/0:38,0:39:96.25:0,96,1378	1/1:5,8:14:32.99:357,33,0	1/1:8,7:15:21.02:233,21,0	1/1:6,14:20:41.97:478,42,0	1/1:2,8:10:6.33:198,6,0
chr10	64559804	.	GGCACACACACGCGC	G	3537.75	PASS	AB=1.000;AC=38;AF=0.704;AN=54;BaseQRankSum=4.646;DP=450;FS=22.447;HRun=0;HaplotypeScore=120.7890;InbreedingCoeff=0.3993;MQ=70.30;MQ0=1;MQRankSum=-4.961;QD=11.60;ReadPosRankSum=2.635;VQSLOD=0.7340;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:14.37:0,14,201	1/1:2,0:2:3.01:59,3,0	0/1:34,0:22:30.67:31,0,559	0/1:43,0:33:41.57:42,0,953	0/0:20,0:20:14.23:0,14,141	1/1:9,0:9:3.01:104,3,0	1/1:3,17:20:3.01:91,3,0	0/0:17,0:17:46.95:0,47,413	0/1:17,0:17:43.95:81,0,44	1/1:2,10:12:18.04:295,18,0	1/1:1,6:7:3.01:122,3,0	1/1:10,0:10:3.01:104,3,0	0/0:12,0:11:24.08:0,24,926	1/1:4,10:14:3.01:122,3,0	1/1:2,11:13:9.03:304,9,0	1/1:15,0:15:27.09:645,27,0	1/1:5,17:21:9.03:236,9,0	1/1:1,16:17:6.02:244,6,0	1/1:4,0:4:3.01:73,3,0	1/1:2,10:12:3.01:122,3,0	0/1:31,0:30:0:0,0,0	./.	0/0:13,0:13:15.05:0,15,472	0/0:42,0:42:99:0,114,4306	1/1:5,0:5:3.01:57,3,0	1/1:11,0:11:27.09:629,27,0	1/1:2,2:4:3.01:122,3,0	1/1:3,0:3:3.01:56,3,0
chr10	64559805	.	GCACACACACGCGCGCACA	G	2457.67	PASS	AB=1.000;AC=38;AF=0.704;AN=54;BaseQRankSum=5.433;DP=450;FS=20.421;HRun=0;HaplotypeScore=144.6142;InbreedingCoeff=0.2456;MQ=70.29;MQ0=1;MQRankSum=-4.583;QD=7.61;ReadPosRankSum=2.945;VQSLOD=0.9431;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:14.99:0,15,395	1/1:2,0:2:3.01:39,3,0	0/1:33,0:22:30.77:31,0,604	0/1:43,0:33:41.57:42,0,953	0/1:20,0:20:24.73:25,0,120	1/1:2,7:9:3.01:151,3,0	1/1:20,0:20:2.98:22,3,0	0/0:18,0:18:49.97:0,50,472	0/1:17,0:17:34.51:35,0,44	0/1:12,0:12:76.68:188,0,77	1/1:7,0:7:3.01:52,3,0	1/1:3,0:10:3.01:92,3,0	0/0:12,0:11:24.08:0,24,1145	1/1:15,0:14:3.01:52,3,0	1/1:12,0:13:9.03:150,9,0	1/1:13,2:15:24.55:670,25,0	1/1:22,0:21:9.03:165,9,0	1/1:17,0:17:6.02:102,6,0	1/1:4,0:4:3.01:73,3,0	1/1:11,0:11:3.01:52,3,0	0/1:31,0:30:0:0,0,0	./.	0/0:13,0:13:15.05:0,15,524	0/0:43,0:43:99:0,114,5155	1/1:5,0:5:3.01:57,3,0	1/1:11,0:11:25.63:519,26,0	1/1:4,0:4:3.01:52,3,0	1/1:2,0:2:3.01:56,3,0
chr10	64559807	.	ACACACACGCGCG	A	2893.55	PASS	AB=1.000;AC=37;AF=0.685;AN=54;BaseQRankSum=4.995;DP=449;FS=17.602;HRun=0;HaplotypeScore=110.5897;InbreedingCoeff=0.3424;MQ=68.86;MQ0=2;MQRankSum=-5.279;QD=9.68;ReadPosRankSum=2.708;VQSLOD=1.1411;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:5.12:0,5,120	1/1:2,0:2:3.01:59,3,0	0/1:32,0:21:30.76:31,0,538	0/1:41,0:32:41.57:42,0,954	0/0:20,0:20:14.89:0,15,150	1/1:9,0:9:3.01:90,3,0	1/1:19,0:19:3.01:58,3,0	0/0:19,0:18:49.89:0,50,413	0/1:18,0:18:43.95:48,0,44	0/1:12,0:12:1.80:242,0,2	1/1:7,0:7:3.01:90,3,0	1/1:11,0:11:3.01:90,3,0	0/0:12,0:11:24.08:0,24,831	1/1:14,1:14:3.01:90,3,0	1/1:13,0:13:9.03:225,9,0	1/1:16,0:15:27.09:617,27,0	1/1:23,0:21:9.03:203,9,0	1/1:17,0:17:6.02:179,6,0	1/1:3,0:3:3.01:73,3,0	1/1:11,0:11:3.01:90,3,0	0/1:29,0:28:0:0,0,0	./.	0/0:13,0:13:15.05:0,15,447	0/0:46,0:46:99:0,123,4170	1/1:4,0:4:3.01:57,3,0	1/1:10,0:10:27.09:629,27,0	1/1:4,0:4:3.01:90,3,0	1/1:2,0:2:3.01:56,3,0
chr10	64559813	.	ACGCGCG	A	2341.32	PASS	AB=0.914;AC=38;AF=0.704;AN=54;BaseQRankSum=5.186;DP=409;FS=21.476;HRun=0;HaplotypeScore=74.2331;InbreedingCoeff=0.2640;MQ=66.39;MQ0=5;MQRankSum=-5.238;QD=8.10;ReadPosRankSum=3.299;VQSLOD=-0.0401;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:28:30.35:30,0,46	1/1:1,0:1:3.01:59,3,0	0/1:26,1:17:31.09:31,0,532	0/1:33,0:24:41.10:41,0,954	0/0:19,0:18:14.94:0,15,152	1/1:7,0:7:3.01:48,3,0	1/1:18,0:18:3.01:54,3,0	0/0:19,0:18:48.97:0,49,394	0/1:17,0:16:6.73:7,0,44	0/1:11,0:11:23.26:230,0,23	1/1:7,0:7:3.01:48,3,0	1/1:9,0:9:3.01:48,3,0	0/0:11,0:10:30.10:0,30,758	1/1:12,2:13:3.01:48,3,0	1/1:12,0:12:9.03:161,9,0	1/1:11,2:12:27.09:533,27,0	1/1:22,0:20:9.03:161,9,0	1/1:17,0:17:6.02:95,6,0	1/1:2,0:2:3.01:73,3,0	1/1:10,0:10:3.01:48,3,0	0/1:2,22:23:0:0,0,0	./.	0/0:14,0:14:18.06:0,18,475	0/0:45,0:44:99:0,126,3162	1/1:3,0:3:3.01:57,3,0	1/1:0,9:9:27.09:629,27,0	1/1:2,0:2:3.01:48,3,0	1/1:0,2:2:3.01:56,3,0
chr10	64559817	.	GCGCACACA	G	1607.67	PASS	AB=0.911;AC=43;AF=0.768;AN=56;BaseQRankSum=6.238;DP=385;FS=14.127;HRun=0;HaplotypeScore=77.8767;InbreedingCoeff=0.3004;MQ=61.75;MQ0=8;MQRankSum=-4.529;QD=5.27;ReadPosRankSum=1.437;VQSLOD=0.5907;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,25:29:12.93:247,13,0	1/1:1,0:1:2.97:20,3,0	0/1:22,0:12:8.83:9,0,125	0/1:28,0:19:3.72:4,0,202	0/1:3,0:14:2.09:13,0,2	1/1:7,0:7:3.01:55,3,0	1/1:17,0:17:2.98:22,3,0	1/1:15,0:14:29.85:251,30,0	1/1:1,0:14:3.01:62,3,0	0/1:10,0:10:49.81:50,0,78	1/1:6,0:6:3.01:52,3,0	1/1:9,0:9:3.01:54,3,0	0/0:11,0:10:26.65:0,27,649	1/1:14,0:13:3.01:52,3,0	1/1:12,0:12:9.03:112,9,0	1/1:11,0:10:23.61:224,24,0	1/1:22,0:19:8.90:88,9,0	1/1:17,0:16:6.02:102,6,0	1/1:1,0:1:2.96:19,3,0	1/1:10,0:10:3.01:52,3,0	0/1:24,0:23:0:0,0,0	0/0:12,0:12:3.01:0,3,65	0/0:14,0:14:17.88:0,18,344	0/0:43,0:42:99:0,109,2614	1/1:3,0:3:2.96:19,3,0	1/1:11,0:11:25.89:184,26,0	1/1:2,0:2:3.01:52,3,0	1/1:2,0:2:2.96:19,3,0
chr10	64560842	.	T	TA	8089.99	PASS	AB=1.000;AC=41;AF=0.732;AN=56;BaseQRankSum=-7.833;DP=543;FS=0.863;HRun=11;HaplotypeScore=54.4450;InbreedingCoeff=0.8115;MQ=59.92;MQ0=1;MQRankSum=0.816;QD=19.22;ReadPosRankSum=-2.485;VQSLOD=4.9657;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:33:50.82:0,51,496	1/1:4,7:11:21.04:213,21,0	0/1:9,0:4:15.33:15,0,37	0/0:4,0:2:2.90:0,3,19	0/0:24,0:24:43.85:0,44,387	1/1:4,21:25:48.10:487,48,0	1/1:2,11:14:23.11:268,23,0	1/1:9,22:31:22.60:563,23,0	0/0:14,0:14:38.84:0,39,300	1/1:8,21:29:14.55:465,15,0	1/1:5,19:25:47.85:449,48,0	1/1:3,12:15:33.06:332,33,0	0/0:15,0:15:35.84:0,36,278	1/1:4,15:19:12.55:312,13,0	1/1:2,18:20:39.06:389,39,0	1/1:3,11:14:9.83:281,10,0	1/1:3,31:35:46.72:836,47,0	1/1:5,13:18:18.85:372,19,0	1/1:4,15:19:47.83:469,48,0	1/1:9,18:28:33.64:488,34,0	1/1:0,2:3:8.98:80,9,0	1/1:4,10:14:0.73:168,1,0	0/0:17,0:18:34.81:0,35,257	0/0:13,0:13:35.86:0,36,279	1/1:3,19:22:51.10:518,51,0	1/1:10,22:31:63.08:616,63,0	1/1:3,14:17:17.04:312,17,0	1/1:1,19:20:45.09:456,45,0
chr10	64561858	.	G	GAAAAA	20739.69	PASS	AB=0.938;AC=42;AF=0.750;AN=56;BaseQRankSum=-2.068;DP=612;FS=7.527;HRun=10;HaplotypeScore=132.7243;InbreedingCoeff=0.8358;MQ=57.89;MQ0=0;MQRankSum=-9.459;QD=46.92;ReadPosRankSum=-4.501;VQSLOD=1.9443;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:52.68:0,53,858	1/1:2,0:6:18.05:259,18,0	0/1:9,0:10:5.44:5,0,182	0/1:5,0:7:7.81:8,0,191	0/0:44,0:45:99:0,117,1838	1/1:11,12:25:33.11:846,33,0	1/1:2,8:10:21.07:571,21,0	0/0:34,0:35:57.92:0,58,1005	1/1:10,0:22:50.47:550,50,0	1/1:15,19:42:90.21:2035,90,0	1/1:8,11:23:45.07:1019,45,0	1/1:8,9:20:39.13:1043,39,0	0/0:19,0:19:45.10:0,45,724	1/1:6,10:17:43.39:1094,43,0	1/1:8,12:23:57.20:1424,57,0	1/1:11,10:27:47.53:1132,48,0	1/1:4,10:19:30.10:812,30,0	1/1:5,13:24:45.15:1103,45,0	1/1:9,5:16:33.11:862,33,0	1/1:5,17:27:66.18:1515,66,0	1/1:5,4:11:9.50:206,10,0	1/1:7,5:13:29.46:639,29,0	0/0:31,0:33:90.23:0,90,1408	0/0:13,0:15:41.59:0,42,592	1/1:9,7:22:48.16:1111,48,0	1/1:18,14:38:96.31:2232,96,0	1/1:9,10:26:57.20:1384,57,0	1/1:1,12:14:33.11:888,33,0
chr10	64561883	.	GA	G	935.45	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-1.315;DP=546;FS=27.449;HRun=6;HaplotypeScore=101.3747;InbreedingCoeff=0.9535;MQ=60.01;MQ0=0;MQRankSum=2.592;QD=24.62;ReadPosRankSum=-3.301;VQSLOD=1.2000;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:66.19:0,66,845	0/0:10,0:10:30.05:0,30,375	0/0:14,0:12:32.68:0,33,357	0/0:8,0:6:14.22:0,14,119	0/0:37,0:37:93.30:0,93,1216	0/0:16,0:16:36.10:0,36,454	0/0:8,0:8:15.05:0,15,191	1/1:7,31:38:96.24:1030,96,0	0/0:15,0:15:39.08:0,39,458	0/0:35,0:35:93.29:0,93,1194	0/0:21,0:21:63.18:0,63,799	0/0:14,0:14:33.10:0,33,424	0/0:16,0:16:45.15:0,45,591	0/0:16,0:16:41.50:0,41,506	0/0:19,0:19:45.13:0,45,568	0/0:18,0:18:45.14:0,45,578	0/0:18,0:18:36.12:0,36,466	0/0:25,0:25:51.14:0,51,637	0/0:19,0:19:42.14:0,42,552	0/0:23,0:23:60.19:0,60,768	0/0:9,0:9:22.06:0,22,293	0/0:8,0:8:18.06:0,18,237	0/0:30,0:30:78.04:0,78,998	0/0:10,0:10:27.05:0,27,336	0/0:25,0:25:66.19:0,66,844	0/0:29,0:29:72.23:0,72,932	0/0:30,0:30:78.09:0,78,958	0/0:13,0:13:33:0,33,351
chr10	64561890	.	T	TA	214.82	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-0.292;DP=531;FS=6.190;HRun=8;HaplotypeScore=99.6503;InbreedingCoeff=0.8112;MQ=61.62;MQ0=0;MQRankSum=-0.832;QD=17.90;ReadPosRankSum=0.118;VQSLOD=3.1073;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:59.99:0,60,541	0/0:9,0:9:24.01:0,24,220	0/0:17,0:15:7.32:0,7,219	0/0:8,0:6:6:0,6,55	0/0:33,0:33:90.02:0,90,813	0/0:15,0:15:36.01:0,36,325	0/0:8,0:8:17.99:0,18,159	0/0:39,0:39:99:0,106,944	1/1:4,8:12:27.08:309,27,0	0/0:34,0:34:99:0,102,924	0/0:24,0:24:65.93:0,66,590	0/0:14,0:14:36.01:0,36,326	0/0:14,0:14:36.02:0,36,329	0/0:16,0:16:32.04:0,32,275	0/0:17,0:17:42.02:0,42,383	0/0:17,0:17:42.02:0,42,384	0/0:19,0:19:33.01:0,33,300	0/0:25,0:25:47.99:0,48,431	0/0:19,0:19:41.98:0,42,378	0/0:23,0:23:60.03:0,60,548	0/0:9,0:9:20.36:0,20,190	0/0:6,0:6:18.01:0,18,164	0/0:26,0:26:66.46:0,66,591	0/0:8,0:8:23.99:0,24,214	0/0:27,0:27:66.02:0,66,600	0/0:27,0:27:71.85:0,72,635	0/0:31,0:31:45.05:0,45,626	0/0:8,0:8:15.01:0,15,137
chr10	64562229	.	G	GCACA	8101.99	PASS	AB=0.824;AC=35;AF=0.673;AN=52;BaseQRankSum=-4.269;DP=604;FS=0.560;HRun=0;HaplotypeScore=111.9406;InbreedingCoeff=0.1612;MQ=63.64;MQ0=12;MQRankSum=0.686;QD=16.50;ReadPosRankSum=0.369;VQSLOD=4.2341;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:21,20:47:26.74:579,27,0	1/1:3,4:8:2.90:71,3,0	./.	./.	1/1:15,7:25:16.80:259,17,0	1/1:6,11:17:25.64:573,26,0	0/1:25,6:37:28.66:163,0,29	0/1:28,0:28:56.57:57,0,187	0/0:14,0:17:14.60:0,15,326	1/1:15,7:25:29.81:519,30,0	1/1:7,4:12:8.79:210,9,0	1/1:5,13:21:21.43:381,21,0	0/0:9,0:11:2.57:0,3,152	1/1:18,6:25:38.30:729,38,0	1/1:13,16:35:41.88:933,42,0	0/1:10,9:25:47.08:695,0,47	0/1:16,15:34:50.26:703,0,50	0/1:13,0:18:68.11:414,0,68	0/1:15,0:14:34.22:68,0,34	0/1:6,0:6:0:0,0,0	1/1:12,5:21:11.24:108,11,0	0/1:13,1:13:31.37:251,0,31	0/0:12,0:14:11.53:0,12,268	0/0:35,0:37:66.22:0,66,1010	0/1:11,9:22:29.03:338,0,29	1/1:12,11:27:44.53:723,45,0	1/1:14,2:22:12.04:257,12,0	1/1:2,1:4:3.01:71,3,0
chr10	64562515	.	C	CGT	1901.61	PASS	AB=0.794;AC=32;AF=0.640;AN=50;BaseQRankSum=-0.792;DP=616;FS=13.658;HRun=0;HaplotypeScore=101.2131;InbreedingCoeff=0.1094;MQ=54.56;MQ0=17;MQRankSum=-2.433;QD=4.53;ReadPosRankSum=-0.675;VQSLOD=1.6524;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:36:35.50:0,36,190	1/1:8,1:9:9.03:131,9,0	./.	./.	0/0:13,0:21:2.63:0,3,14	1/1:15,0:23:11.71:105,12,0	1/1:15,0:19:1.78:6,2,0	1/1:19,2:20:8.27:71,8,0	0/1:13,3:16:23.41:81,0,23	1/1:13,0:13:20.20:201,20,0	1/1:10,0:14:9:79,9,0	1/1:13,0:23:4.53:15,5,0	0/0:17,0:16:12.02:0,12,124	1/1:23,0:23:14.02:106,14,0	0/1:18,7:26:99:180,0,105	1/1:10,0:17:6:52,6,0	0/1:18,7:26:53.35:199,0,53	1/1:14,2:26:6.47:53,6,0	0/1:19,2:19:15.84:82,0,16	./.	0/1:22,8:30:33.25:33,0,48	1/1:11,0:16:1.80:6,2,0	0/0:12,0:13:3.79:0,4,41	0/0:22,0:23:36.34:0,36,356	1/1:20,0:24:5.74:38,6,0	0/1:20,11:33:70.21:391,0,70	0/1:15,5:21:54.04:78,0,54	0/1:10,5:14:18.01:155,0,18
chr10	64564034	.	GA	G	9108.53	PASS	AB=0.897;AC=46;AF=0.821;AN=56;BaseQRankSum=3.979;DP=591;FS=3.806;HRun=11;HaplotypeScore=63.2417;InbreedingCoeff=0.7017;MQ=72.17;MQ0=0;MQRankSum=0.281;QD=18.36;ReadPosRankSum=4.253;VQSLOD=5.9271;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,26:27:65.92:542,66,0	1/1:0,3:3:8.99:74,9,0	0/1:17,2:18:25.99:26,0,166	0/1:7,1:8:12.17:12,0,56	1/1:2,14:16:41.95:345,42,0	1/1:3,21:24:31.96:418,32,0	1/1:4,21:25:28.91:394,29,0	0/0:6,0:24:54.26:0,54,288	1/1:1,17:18:28.15:350,28,0	1/1:5,22:27:65.81:531,66,0	1/1:4,18:23:52.97:425,53,0	1/1:3,16:19:41.95:345,42,0	0/0:12,2:15:8.27:0,8,277	1/1:1,17:18:38.95:320,39,0	1/1:2,13:15:32.96:271,33,0	1/1:0,11:11:32.96:271,33,0	1/1:6,24:30:65.91:542,66,0	1/1:2,20:22:47.94:394,48,0	1/1:7,11:18:3.94:235,4,0	1/1:2,23:25:56.91:468,57,0	1/1:5,21:26:33.90:481,34,0	1/1:2,22:24:62.92:517,63,0	0/0:29,0:29:69.63:0,70,727	0/0:27,0:27:75.18:0,75,793	1/1:3,14:17:12.96:313,13,0	1/1:0,36:36:99:875,108,0	1/1:2,22:24:62.91:517,63,0	1/1:0,21:21:53.94:443,54,0
chr10	64564845	.	C	CT	1076.40	PASS	AB=0.598;AC=2;AF=0.036;AN=56;BaseQRankSum=-4.741;DP=674;FS=2.313;HRun=4;HaplotypeScore=118.7124;InbreedingCoeff=-0.0382;MQ=55.72;MQ0=7;MQRankSum=2.039;QD=22.42;ReadPosRankSum=1.990;VQSLOD=2.5933;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:5,16:21:48.79:570,0,49	0/0:15,0:15:42.11:0,42,479	0/0:18,0:13:24.03:0,24,262	0/0:9,0:6:14.72:0,15,123	0/1:11,16:27:99:595,0,146	0/0:29,0:29:84.24:0,84,978	0/0:17,0:16:48.11:0,48,539	0/0:53,0:50:99:0,108,943	0/0:24,0:25:62.78:0,63,658	0/0:37,0:36:99:0,105,1212	0/0:23,0:22:60.91:0,61,623	0/0:24,0:24:69.14:0,69,769	0/0:17,0:17:31.53:0,32,394	0/0:23,0:23:66.07:0,66,668	0/0:32,0:32:81.20:0,81,911	0/0:27,0:25:64.80:0,65,685	0/0:21,0:21:52.03:0,52,595	0/0:12,0:12:28.62:0,29,277	0/0:28,0:26:68.96:0,69,699	0/0:28,0:28:75.19:0,75,852	0/0:10,0:10:24.07:0,24,288	0/0:27,0:25:72.18:0,72,810	0/0:12,0:12:18.03:0,18,194	0/0:21,0:21:38:0,38,467	0/0:28,0:28:72.21:0,72,849	0/0:37,0:37:98.44:0,98,1203	0/0:42,0:42:99:0,120,1353	0/0:11,0:11:24.07:0,24,284
chr10	64564876	.	T	TCTTTCTTTCTTC	10522.30	PASS	AB=0.981;AC=24;AF=0.429;AN=56;BaseQRankSum=-0.325;DP=652;FS=11.221;HRun=0;HaplotypeScore=224.2130;InbreedingCoeff=-0.6147;MQ=48.56;MQ0=8;MQRankSum=1.965;QD=19.24;ReadPosRankSum=1.766;VQSLOD=2.8126;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:20,0:20:99:108,0,155	0/1:17,0:17:92.70:407,0,93	0/0:10,0:7:17.98:0,18,168	0/0:2,0:2:2.50:0,2,9	0/1:28,0:28:99:219,0,312	0/1:29,0:29:95.15:705,0,95	0/1:13,0:11:31.88:212,0,32	0/0:56,0:47:21.53:0,22,544	0/1:7,13:24:56.83:669,0,57	0/1:33,0:32:99:535,0,142	0/1:18,0:17:23.12:381,0,23	0/1:30,0:30:59.05:738,0,59	0/0:15,0:15:22.71:0,23,137	0/1:26,0:26:31.75:828,0,32	0/1:31,0:31:99:464,0,100	0/1:25,0:23:58.86:505,0,59	0/1:21,0:21:58.27:447,0,58	0/1:12,0:12:78.93:352,0,79	1/1:24,0:21:21.01:609,21,0	0/1:33,0:33:76.74:602,0,77	0/1:9,0:9:32.98:84,0,33	0/1:29,0:27:99:505,0,160	0/1:15,0:15:12.05:12,0,170	0/0:21,0:21:47.13:0,47,398	0/1:29,0:29:99:301,0,121	0/1:34,0:34:99:905,0,225	0/1:39,0:39:99:886,0,109	0/1:8,0:8:12.98:48,0,13
chr10	64564895	.	T	TCC	485.74	PASS	AB=1.000;AC=14;AF=0.250;AN=56;BaseQRankSum=5.356;DP=533;FS=11.125;HRun=0;HaplotypeScore=106.6910;InbreedingCoeff=-0.1850;MQ=55.83;MQ0=4;MQRankSum=-0.597;QD=1.88;ReadPosRankSum=-4.992;VQSLOD=-0.6703;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:19:53.54:0,54,815	0/1:13,0:13:99:129,0,389	0/0:14,0:11:33.11:0,33,521	0/0:17,0:15:29.59:0,30,567	0/0:22,0:23:42.76:0,43,896	0/1:23,0:23:99:119,0,750	0/1:13,0:13:26.47:26,0,495	0/0:32,0:28:81.27:0,81,1297	0/1:19,0:19:14.83:15,0,278	0/0:22,0:21:35.22:0,35,926	0/0:14,0:14:1.31:0,1,478	0/1:25,0:25:65.89:66,0,929	0/0:11,0:11:26.70:0,27,284	0/1:26,0:26:23.69:24,0,1045	0/0:24,0:24:17.09:0,17,856	0/0:21,0:20:24.01:0,24,763	0/0:12,0:12:36.12:0,36,576	0/0:15,0:15:45.15:0,45,728	0/0:19,0:18:41.42:0,41,811	0/1:27,0:27:0.67:1,0,1074	0/0:10,0:10:24.08:0,24,392	0/1:25,0:25:7.30:7,0,1002	0/1:12,0:12:14.60:15,0,316	0/0:19,0:19:53.86:0,54,734	0/1:17,0:17:94.31:94,0,400	0/1:27,0:27:43:43,0,1022	0/1:27,0:27:40.14:40,0,1006	1/1:1,4:5:3.01:55,3,0
chr10	64565652	.	C	CA	1105.70	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-5.256;DP=562;FS=5.495;HRun=5;HaplotypeScore=78.0034;InbreedingCoeff=0.9874;MQ=78.24;MQ0=0;MQRankSum=0.626;QD=31.59;ReadPosRankSum=-5.230;VQSLOD=1.6332;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,114,1222	0/0:8,0:8:24.06:0,24,258	0/0:28,0:27:52.26:0,52,614	0/0:21,0:21:24.76:0,25,408	0/0:22,0:22:60.15:0,60,645	0/0:12,0:12:33.08:0,33,354	0/0:16,0:16:48.12:0,48,516	1/1:3,32:34:93.28:1201,93,0	0/0:15,0:15:42.10:0,42,451	0/0:24,0:24:60.15:0,60,645	0/0:18,0:18:48.12:0,48,515	0/0:20,0:20:60.15:0,60,643	0/0:13,0:13:33.08:0,33,354	0/0:17,0:17:48.12:0,48,516	0/0:16,0:16:42.10:0,42,451	0/0:18,0:18:54.14:0,54,579	0/0:38,0:38:99:0,105,1128	0/0:19,0:19:54.13:0,54,580	0/0:29,0:29:78.04:0,78,805	0/0:16,0:16:45.09:0,45,474	0/0:15,0:15:42.11:0,42,451	0/0:15,0:15:36.09:0,36,387	0/0:15,0:15:39.07:0,39,409	0/0:25,0:25:66.14:0,66,699	0/0:13,0:13:36.07:0,36,377	0/0:23,0:23:63.16:0,63,677	0/0:22,0:22:57.12:0,57,603	0/0:9,0:9:18.04:0,18,193
chr10	64569758	.	G	GA	14427.56	PASS	AB=0.963;AC=47;AF=0.839;AN=56;BaseQRankSum=-10.120;DP=610;FS=12.070;HRun=8;HaplotypeScore=60.5269;InbreedingCoeff=0.8746;MQ=78.45;MQ0=0;MQRankSum=-0.423;QD=27.07;ReadPosRankSum=2.921;VQSLOD=4.8957;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,31:33:84.25:969,84,0	1/1:3,10:13:27.08:312,27,0	0/1:25,1:24:8.44:8,0,278	0/0:15,0:12:15.95:0,16,146	1/1:2,18:21:56.96:623,57,0	1/1:3,17:20:45.13:519,45,0	1/1:4,17:21:12.12:390,12,0	1/1:7,13:20:41.88:476,42,0	1/1:2,19:21:54.16:623,54,0	1/1:4,23:27:69.11:755,69,0	1/1:3,16:19:48.03:522,48,0	1/1:2,16:18:48.14:553,48,0	0/0:14,0:14:36.02:0,36,329	1/1:1,18:19:48.14:554,48,0	1/1:4,20:24:57.17:658,57,0	1/1:0,14:14:42.12:485,42,0	1/1:4,26:30:60.08:894,60,0	1/1:4,27:31:78.21:887,78,0	1/1:2,23:25:69.15:763,69,0	1/1:5,20:26:63.02:704,63,0	1/1:0,12:12:36.11:415,36,0	1/1:2,17:19:48.14:554,48,0	0/0:26,0:26:72.01:0,72,650	0/0:22,0:22:60.03:0,60,549	1/1:1,26:27:54.16:623,54,0	1/1:1,24:25:72.21:824,72,0	1/1:2,28:30:84.25:969,84,0	1/1:0,12:12:30.09:346,30,0
chr10	64569780	.	A	AAAC	1064.56	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-5.658;DP=665;FS=1.582;HRun=0;HaplotypeScore=140.4437;InbreedingCoeff=0.9956;MQ=74.16;MQ0=1;MQRankSum=-0.819;QD=32.26;ReadPosRankSum=-5.986;VQSLOD=2.7036;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:78.22:0,78,1053	0/0:13,0:13:30.09:0,30,409	0/0:31,0:27:33.09:0,33,441	0/0:25,0:22:32.05:0,32,363	0/0:23,0:23:51.14:0,51,675	0/0:17,0:17:45.14:0,45,623	0/0:25,0:25:37.35:0,37,485	1/1:11,20:33:35.63:1159,36,0	0/0:23,0:23:57.17:0,57,775	0/0:31,0:31:69.22:0,69,949	0/0:14,0:14:36.12:0,36,510	0/0:19,0:19:45.15:0,45,639	0/0:16,0:16:33.11:0,33,468	0/0:17,0:17:39.08:0,39,514	0/0:23,0:23:51.17:0,51,723	0/0:20,0:20:54.17:0,54,750	0/0:40,0:40:84.03:0,84,1349	0/0:37,0:37:93.25:0,93,1260	0/0:21,0:20:42.08:0,42,554	0/0:24,0:24:54.17:0,54,752	0/0:15,0:15:30.09:0,30,409	0/0:22,0:22:48.14:0,48,634	0/0:26,0:26:69.21:0,69,945	0/0:28,0:28:41.12:0,41,859	0/0:27,0:27:53.93:0,54,765	0/0:24,0:24:54.17:0,54,749	0/0:28,0:28:63.19:0,63,860	0/0:10,0:10:24.08:0,24,341
chr10	64570386	.	C	CGGAGGTGGG	7753.44	PASS	AB=0.947;AC=7;AF=0.125;AN=56;BaseQRankSum=1.423;DP=650;FS=8.014;HRun=0;HaplotypeScore=181.1703;InbreedingCoeff=0.8334;MQ=74.70;MQ0=0;MQRankSum=-10.495;QD=74.55;ReadPosRankSum=-3.214;VQSLOD=3.2333;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,20:37:75.26:3404,75,0	0/0:6,0:6:18.06:0,18,554	0/0:19,0:19:51.15:0,51,1185	0/0:24,0:24:63.05:0,63,1341	1/1:5,7:19:23.75:1132,24,0	0/0:26,0:26:75.14:0,75,2041	0/0:26,0:26:72.21:0,72,2037	1/1:14,5:30:87.13:2720,87,0	0/1:17,0:18:23.78:498,0,24	0/0:28,0:28:75.21:0,75,2136	0/0:15,0:15:44.97:0,45,1123	0/0:28,0:28:81.28:0,81,2472	0/0:22,0:22:66.18:0,66,1795	0/0:16,0:16:45.14:0,45,1328	0/0:25,0:25:75.23:0,75,2205	0/0:25,0:24:63.18:0,63,1820	0/0:29,0:29:81.26:0,81,2329	0/0:26,0:26:69.18:0,69,1960	0/0:19,0:19:57.17:0,57,1518	0/0:19,0:19:54.17:0,54,1438	0/0:42,0:42:99:0,123,3554	0/0:16,0:16:48.15:0,48,1422	0/0:22,0:22:51.11:0,51,1334	0/0:35,0:35:99:0,99,2821	0/0:20,0:20:54.18:0,54,1550	0/0:26,0:26:72.24:0,72,2195	0/0:24,0:24:69.17:0,69,1852	0/0:8,0:8:21.07:0,21,651
chr10	64571976	.	CGG	C	6884.57	PASS	AB=0.900;AC=36;AF=0.643;AN=56;BaseQRankSum=-11.144;DP=625;FS=5.703;HRun=5;HaplotypeScore=87.5437;InbreedingCoeff=-0.1205;MQ=73.94;MQ0=15;MQRankSum=-3.566;QD=12.75;ReadPosRankSum=3.928;VQSLOD=0.9773;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:41,1:41:1.80:431,2,0	1/1:6,0:6:11.97:97,12,0	0/0:34,0:21:55.91:0,56,579	0/0:40,0:26:71.96:0,72,736	1/1:17,0:17:29.77:225,30,0	0/1:14,2:15:30.10:140,0,30	0/1:29,0:29:49.01:382,0,49	1/1:34,1:35:89.83:742,90,0	0/1:17,0:17:2.19:178,0,2	1/1:18,0:18:2.82:281,3,0	1/1:16,0:16:16.08:237,16,0	0/1:19,4:23:33.86:415,0,34	0/0:11,0:11:30.01:0,30,332	0/1:20,0:20:82.41:220,0,82	0/1:7,16:22:59.91:60,0,102	0/1:13,1:14:58.41:184,0,58	0/1:26,0:25:99:200,0,125	0/1:20,2:22:71.05:289,0,71	1/1:22,0:15:14.38:240,14,0	0/1:23,1:25:14.22:383,0,14	1/1:46,2:48:16.78:811,17,0	1/1:8,0:8:23.94:192,24,0	0/1:4,14:17:30.57:33,0,31	0/1:27,2:29:99:310,0,189	0/1:12,0:12:14.04:14,0,86	1/1:21,0:20:34.83:403,35,0	0/1:15,0:14:61.97:141,0,62	1/1:18,0:17:6.44:277,6,0
chr10	64571978	.	GGGGT	G	5248.12	PASS	AB=1.000;AC=25;AF=0.446;AN=56;BaseQRankSum=-13.579;DP=659;FS=10.563;HRun=0;HaplotypeScore=121.4762;InbreedingCoeff=-0.3713;MQ=72.84;MQ0=15;MQRankSum=-1.310;QD=10.19;ReadPosRankSum=2.138;VQSLOD=3.7687;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:42,0:46:99:261,0,200	0/1:6,0:6:29.79:61,0,30	0/0:34,0:21:55.93:0,56,580	0/0:41,0:27:55.27:0,55,717	1/1:15,0:15:23.65:199,24,0	0/1:16,0:15:75.01:75,0,128	0/1:28,0:28:99:351,0,250	1/1:6,31:37:48.22:730,48,0	0/1:20,0:20:87.82:88,0,311	0/1:18,0:18:58.24:223,0,58	0/1:17,0:17:99:166,0,118	0/1:25,0:25:99:215,0,190	0/0:13,0:13:31.25:0,31,429	0/1:20,0:20:99:220,0,219	0/0:23,0:22:20.55:0,21,278	0/1:15,0:15:91.53:92,0,235	0/1:29,0:28:99:169,0,474	0/1:25,0:25:99:171,0,338	0/1:22,0:15:24.15:200,0,24	0/1:25,0:25:99:291,0,178	0/1:55,0:55:99:653,0,377	1/1:9,0:9:23.94:192,24,0	0/0:20,0:19:12.96:0,13,177	0/1:31,0:31:99:157,0,610	0/0:13,0:13:10.34:0,10,249	0/1:22,0:21:8.23:365,0,8	0/1:14,0:13:99:103,0,218	0/1:19,0:18:87.83:267,0,88
chr10	64575267	.	TCCTTC	T	8656.38	PASS	AB=1.000;AC=45;AF=0.804;AN=56;BaseQRankSum=8.631;DP=681;FS=26.911;HRun=0;HaplotypeScore=130.3101;InbreedingCoeff=0.7907;MQ=60.44;MQ0=20;MQRankSum=-3.066;QD=16.68;ReadPosRankSum=1.689;VQSLOD=2.9308;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:30:66.21:0,66,1636	1/1:4,5:8:9.03:169,9,0	0/1:48,0:24:5.11:5,0,294	0/0:56,0:26:38.58:0,39,487	1/1:10,0:19:21.06:243,21,0	1/1:12,18:28:14.98:243,15,0	1/1:14,3:16:36.08:559,36,0	1/1:17,0:35:23.90:207,24,0	1/1:3,0:20:42.12:489,42,0	1/1:6,15:19:48.04:821,48,0	1/1:7,14:21:30.10:559,30,0	1/1:7,10:15:5.75:112,6,0	0/0:26,0:26:57.17:0,57,1402	1/1:21,2:20:45.15:758,45,0	1/1:21,2:21:39.03:589,39,0	1/1:6,15:18:9.03:169,9,0	1/1:9,13:20:6.02:112,6,0	1/1:7,17:23:11.22:224,11,0	1/1:20,2:20:33.05:518,33,0	1/1:14,3:17:36.04:495,36,0	1/1:6,15:18:6.02:113,6,0	1/1:13,4:17:30.08:489,30,0	0/0:18,0:18:51.14:0,51,1204	0/0:29,0:29:66.16:0,66,1557	1/1:7,16:22:6.02:113,6,0	1/1:7,23:29:66.18:1115,66,0	1/1:8,15:22:20.21:387,20,0	1/1:5,10:14:9.03:169,9,0
chr10	64575308	.	CTCTT	C	1602.39	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=1.897;DP=763;FS=2.407;HRun=0;HaplotypeScore=235.0916;InbreedingCoeff=0.9035;MQ=47.50;MQ0=20;MQRankSum=-5.455;QD=24.28;ReadPosRankSum=1.284;VQSLOD=3.5823;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:63.16:0,63,1270	0/0:11,0:11:26.68:0,27,470	0/0:72,0:21:8.31:0,8,506	0/0:83,0:22:32.17:0,32,647	1/1:11,10:21:44.63:444,45,0	0/0:24,0:24:39.11:0,39,687	0/0:25,0:23:62.97:0,63,1116	1/1:20,0:20:41.94:421,42,0	1/1:15,10:25:74.47:879,74,0	0/0:31,0:29:78.17:0,78,1374	0/0:24,0:23:62.99:0,63,872	0/0:20,0:19:42.06:0,42,696	0/0:29,0:29:75.24:0,75,1777	0/0:24,0:23:56:0,56,988	0/0:29,0:25:74.84:0,75,1188	0/0:27,0:26:43.70:0,44,854	0/0:20,0:18:21.34:0,21,360	0/0:18,0:18:3.07:0,3,305	0/0:27,0:27:69.16:0,69,1134	0/0:18,0:17:48.14:0,48,806	0/0:12,0:12:12.02:0,12,150	0/0:23,0:23:39.03:0,39,553	0/0:23,0:22:66.13:0,66,1428	0/0:40,0:40:98.97:0,99,2209	0/0:29,0:29:48.16:0,48,989	0/0:31,0:31:81.22:0,81,1457	0/0:18,0:18:38.09:0,38,482	0/0:9,0:9:15.03:0,15,227
chr10	64575317	.	T	TCTTC	12831.85	PASS	AB=0.870;AC=37;AF=0.661;AN=56;BaseQRankSum=5.180;DP=744;FS=11.689;HRun=0;HaplotypeScore=200.2324;InbreedingCoeff=0.9015;MQ=44.43;MQ0=16;MQRankSum=-6.891;QD=29.57;ReadPosRankSum=-0.398;VQSLOD=3.8356;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:24:30.12:0,30,439	1/1:9,4:12:26.98:456,27,0	0/0:53,0:16:23.90:0,24,261	0/0:61,0:17:23.97:0,24,268	0/0:24,0:24:47.87:0,48,460	1/1:15,8:20:32.32:643,32,0	1/1:25,3:26:53.74:897,54,0	0/0:19,0:18:26.40:0,26,225	0/0:26,0:26:60.01:0,60,612	1/1:23,7:27:65.90:1146,66,0	1/1:17,8:22:50.96:747,51,0	1/1:20,3:20:38.69:585,39,0	0/0:28,0:28:75:0,75,1092	1/1:16,7:21:54.10:1008,54,0	1/1:18,9:25:57.71:1105,58,0	1/1:22,8:27:45.06:868,45,0	1/1:17,1:17:23.82:237,24,0	0/1:17,3:19:50.89:291,0,51	1/1:24,2:26:53.83:757,54,0	1/1:13,8:20:45.07:826,45,0	1/1:10,2:11:8.98:163,9,0	1/1:25,2:24:35.71:418,36,0	0/0:23,0:22:54.14:0,54,804	0/0:46,0:46:95.68:0,96,1408	1/1:23,7:28:48.05:827,48,0	1/1:20,8:27:72.03:1209,72,0	1/1:19,1:17:26.92:425,27,0	1/1:6,3:8:9.03:222,9,0
chr10	64575353	.	CCTTTCTTTCTTTCTTTCCTT	C	8130.29	PASS	AB=0.981;AC=21;AF=0.404;AN=52;BaseQRankSum=5.817;DP=710;FS=19.349;HRun=0;HaplotypeScore=405.8986;InbreedingCoeff=-0.6774;MQ=37.48;MQ0=10;MQRankSum=-5.272;QD=15.37;ReadPosRankSum=-6.988;VQSLOD=1.1998;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:22:99:144,0,608	0/1:15,0:14:99:194,0,306	./.	./.	0/1:25,0:25:99:447,0,1067	0/1:23,0:20:99:248,0,473	0/1:27,0:24:99:190,0,784	0/0:19,0:18:52.38:0,52,1172	0/0:27,0:27:75.19:0,75,2268	0/1:30,0:26:99:573,0,769	0/1:30,0:25:99:422,0,323	0/1:27,0:22:99:379,0,429	0/0:44,0:44:99:0,126,6207	0/1:31,0:29:99:333,0,551	0/1:38,0:35:99:414,0,591	0/1:34,0:31:99:567,0,299	0/1:25,0:22:99:301,0,770	0/1:19,0:18:99:238,0,340	0/1:26,0:22:99:389,0,459	0/1:28,0:26:99:510,0,375	0/1:10,0:7:99:117,0,164	0/1:16,15:27:82.61:313,0,83	0/0:23,0:22:63.20:0,63,2658	0/0:56,0:55:99:0,134,8332	0/1:29,0:26:99:767,0,390	0/1:28,0:28:99:1069,0,523	0/1:19,0:16:99:386,0,263	0/1:10,0:10:99:129,0,169
chr10	64579525	.	GA	G	4714.06	PASS	AB=0.625;AC=43;AF=0.768;AN=56;BaseQRankSum=-6.085;DP=443;FS=44.733;HRun=1;HaplotypeScore=60.6653;InbreedingCoeff=0.8634;MQ=92.93;MQ0=1;MQRankSum=-4.092;QD=14.33;ReadPosRankSum=-10.572;VQSLOD=0.2073;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,25:27:32.99:394,33,0	1/1:3,1:4:12.01:118,12,0	0/0:21,0:21:59.50:0,59,694	0/0:24,0:23:57.34:0,57,631	1/1:12,1:13:21.38:178,21,0	1/1:12,1:13:15.41:203,15,0	1/1:16,2:18:14.14:186,14,0	1/1:19,1:20:49.34:458,49,0	1/1:16,0:16:17.64:144,18,0	1/1:12,0:12:21.56:192,22,0	1/1:8,0:8:12.84:123,13,0	0/1:8,12:20:0.24:0,0,3	0/0:16,0:16:48.13:0,48,614	1/1:11,1:12:12.25:164,12,0	1/1:13,4:17:12.63:212,13,0	1/1:14,1:15:14.37:146,14,0	1/1:20,3:23:26.18:385,26,0	1/1:16,1:17:32.30:342,32,0	1/1:16,0:16:10.37:192,10,0	1/1:10,0:10:26.97:226,27,0	1/1:24,0:24:30.93:342,31,0	0/0:3,5:8:2.49:0,2,6	0/0:14,0:14:42.10:0,42,516	0/0:31,0:31:90.18:0,90,1163	1/1:12,1:13:28.99:249,29,0	1/1:8,0:8:17.91:140,18,0	1/1:20,1:21:29.14:270,29,0	1/1:2,0:2:5.99:48,6,0
chr10	64582400	.	C	CAG	2670.13	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-10.210;DP=687;FS=1.723;HRun=0;HaplotypeScore=81.7038;InbreedingCoeff=0.9923;MQ=95.13;MQ0=0;MQRankSum=-2.015;QD=39.27;ReadPosRankSum=-1.763;VQSLOD=5.1019;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,129,1783	0/0:6,0:6:14.72:0,15,182	0/0:46,0:46:99:0,129,1772	0/0:19,0:19:51.17:0,51,715	1/1:4,12:18:33.11:604,33,0	0/0:25,0:25:69.20:0,69,949	0/0:40,0:40:99:0,111,1523	1/1:3,28:32:84.18:1330,84,0	1/1:0,18:18:48.16:879,48,0	0/0:26,0:26:72.24:0,72,1029	0/0:14,0:14:42.14:0,42,597	0/0:20,0:20:57.19:0,57,816	0/0:27,0:27:75.16:0,75,1027	0/0:30,0:30:90.26:0,90,1244	0/0:27,0:27:78.25:0,78,1096	0/0:35,0:35:99:0,102,1425	0/0:51,0:51:99:0,141,1977	0/0:17,0:17:51.17:0,51,730	0/0:16,0:16:42.14:0,42,601	0/0:13,0:13:33.10:0,33,451	0/0:32,0:31:87.27:0,87,1209	0/0:21,0:21:63.19:0,63,882	0/0:9,0:9:27.09:0,27,386	0/0:31,0:31:90.29:0,90,1266	0/0:10,0:10:24.08:0,24,344	0/0:23,0:23:63.21:0,63,902	0/0:27,0:27:81.26:0,81,1141	0/0:10,0:10:27.09:0,27,386
chr10	64583364	.	GTA	G	857.54	PASS	AC=6;AF=0.111;AN=54;BaseQRankSum=6.187;DP=325;FS=3.881;HRun=0;HaplotypeScore=36.5674;InbreedingCoeff=0.6346;MQ=61.17;MQ0=4;MQRankSum=-1.440;QD=20.92;ReadPosRankSum=-0.626;VQSLOD=3.0253;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:39.07:0,39,548	0/0:3,0:3:6.01:0,6,72	0/0:14,0:6:8.91:0,9,85	0/0:19,0:11:4.99:0,5,25	1/1:3,15:18:45.15:579,45,0	0/0:14,0:14:30.09:0,30,472	0/0:6,0:6:9.02:0,9,126	1/1:9,11:15:27.08:333,27,0	1/1:0,3:3:6.02:77,6,0	0/0:11,0:11:27.09:0,27,420	0/0:11,0:11:18.04:0,18,261	./.	0/0:6,0:6:6.02:0,6,101	0/0:7,0:7:12.04:0,12,195	0/0:10,0:9:12.04:0,12,194	0/0:4,0:4:9.03:0,9,152	0/0:28,0:28:60.17:0,60,931	0/0:22,0:21:51.16:0,51,826	0/0:20,0:19:51.13:0,51,734	0/0:7,0:7:3.01:0,3,51	0/0:7,0:7:12.04:0,12,202	0/0:1,0:1:3.01:0,3,47	0/0:6,0:6:6.02:0,6,94	0/0:6,0:6:9.03:0,9,147	0/0:15,0:15:39.11:0,39,602	0/0:12,0:12:18.06:0,18,289	0/0:8,0:8:21.02:0,21,322	0/0:23,1:24:7.66:0,8,667
chr10	64583387	.	TA	T	223.65	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.304;DP=295;FS=22.938;HRun=8;HaplotypeScore=33.5371;InbreedingCoeff=0.4393;MQ=71.16;MQ0=3;MQRankSum=-1.270;QD=17.20;ReadPosRankSum=-1.450;VQSLOD=1.6134;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:18:48.15:0,48,580	0/0:2,0:2:6.02:0,6,72	0/0:23,0:7:13.58:0,14,80	0/0:22,0:11:0.03:0,0,21	0/0:17,0:17:42.13:0,42,503	0/0:14,0:14:42.11:0,42,489	0/0:10,0:10:30.08:0,30,350	1/1:2,11:12:33.05:317,33,0	0/0:6,0:6:15.03:0,15,168	0/0:9,0:9:18.06:0,18,217	0/0:4,0:4:12.02:0,12,133	0/0:2,0:2:6.01:0,6,63	0/0:2,0:2:6.02:0,6,72	0/0:6,0:6:12.02:0,12,132	0/0:10,0:10:24.06:0,24,277	0/0:4,0:4:6.02:0,6,72	0/0:28,0:28:72.17:0,72,840	0/0:13,0:13:36.11:0,36,434	0/0:24,0:24:66.16:0,66,754	0/0:6,0:6:15.05:0,15,181	0/0:6,0:6:18.06:0,18,216	0/0:2,0:2:6.01:0,6,61	0/0:2,0:2:6.02:0,6,72	0/0:2,0:2:6.02:0,6,72	0/0:15,0:15:39.12:0,39,471	0/0:7,0:7:21.05:0,21,236	0/0:12,0:12:30.08:0,30,348	0/0:15,0:15:45.14:0,45,543
chr10	64586733	.	C	CCACACACA	6274.63	PASS	AB=0.781;AC=35;AF=0.761;AN=46;BaseQRankSum=-3.055;DP=832;FS=6.995;HRun=0;HaplotypeScore=219.5417;InbreedingCoeff=0.5292;MQ=49.95;MQ0=49;MQRankSum=-5.679;QD=11.01;ReadPosRankSum=-0.765;VQSLOD=2.8356;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:49:5.98:89,6,0	./.	./.	./.	./.	1/1:19,0:18:15.05:322,15,0	0/1:23,6:29:0:0,0,0	1/1:48,0:41:21.96:282,22,0	0/0:14,0:22:4.26:0,4,256	1/1:13,11:27:45.14:1201,45,0	1/1:10,6:19:2.99:43,3,0	1/1:21,1:21:24.04:489,24,0	0/0:16,0:19:35.91:0,36,638	1/1:23,7:33:20.08:570,20,0	1/1:15,6:26:6:147,6,0	0/1:11,6:24:34.90:598,0,35	1/1:35,0:37:36.07:738,36,0	0/1:23,0:23:15.34:194,0,15	./.	1/1:8,1:16:2.67:24,3,0	1/1:59,19:86:5.63:137,6,0	1/1:22,2:24:14.78:251,15,0	0/0:28,0:32:29.98:0,30,509	0/0:49,0:62:89.94:0,90,1853	1/1:14,0:16:15.04:324,15,0	1/1:21,0:19:21.03:454,21,0	1/1:8,5:14:12.02:226,12,0	1/1:6,1:8:6.02:187,6,0
chr10	64586821	.	GTA	G	2766.60	PASS	AB=0.996;AC=32;AF=0.571;AN=56;BaseQRankSum=10.801;DP=889;FS=4.262;HRun=0;HaplotypeScore=162.8637;InbreedingCoeff=0.2347;MQ=47.20;MQ0=59;MQRankSum=2.634;QD=5.53;ReadPosRankSum=7.562;VQSLOD=2.1288;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:45:82.90:0,83,2069	1/1:5,0:4:8.30:37,8,0	0/0:111,0:8:17.90:0,18,250	0/0:108,0:14:15.26:0,15,288	1/1:17,0:17:28.32:153,28,0	1/1:22,0:21:13.94:135,14,0	0/1:27,0:27:25.71:179,0,26	0/0:40,0:37:85.92:0,86,1713	0/1:25,1:24:46.70:97,0,47	0/1:21,0:20:77.05:79,0,77	1/1:12,0:11:2.80:87,3,0	1/1:29,0:29:18.15:203,18,0	0/0:17,0:17:44.11:0,44,852	0/1:24,0:20:31.95:114,0,32	1/1:25,0:24:12.29:167,12,0	1/1:30,1:27:30.99:236,31,0	1/1:34,2:34:19.32:394,19,0	0/1:25,0:23:59.28:118,0,59	0/1:28,0:25:56.74:57,0,280	1/1:17,0:15:14.09:137,14,0	0/1:72,0:69:39.13:269,0,39	0/1:19,0:18:39.38:99,0,39	0/0:17,0:18:50.94:0,51,839	0/0:48,0:47:84.83:0,85,1855	1/1:13,0:13:27.70:123,28,0	0/1:33,0:31:40.77:151,0,41	1/1:10,0:8:16.77:77,17,0	0/1:7,0:6:7.34:51,0,7
chr10	64586822	.	TAC	T	10592.02	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=3.204;DP=899;FS=1.190;HRun=0;HaplotypeScore=141.2717;InbreedingCoeff=0.9755;MQ=46.94;MQ0=58;MQRankSum=3.165;QD=21.10;ReadPosRankSum=3.718;VQSLOD=5.3830;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,1:45:93.29:0,93,1660	1/1:4,1:4:9.03:109,9,0	0/0:115,0:8:15.02:0,15,174	0/0:109,0:14:17.89:0,18,227	1/1:5,12:17:34.34:411,34,0	1/1:3,20:22:35.92:439,36,0	1/1:13,14:27:60.19:733,60,0	0/0:41,1:39:53.11:0,53,1288	1/1:6,19:24:28.70:419,29,0	1/1:11,12:23:53.97:612,54,0	1/1:4,8:11:26.95:330,27,0	1/1:4,24:29:59.83:711,60,0	0/0:18,0:18:42.14:0,42,678	1/1:12,12:20:36.11:439,36,0	1/1:7,18:24:54.17:656,54,0	1/1:14,17:27:57.18:695,57,0	1/1:17,22:36:71.98:946,72,0	1/1:9,15:23:16.96:353,17,0	1/1:17,9:23:30.09:360,30,0	1/1:6,11:15:39.12:477,39,0	1/1:33,38:69:62.12:1051,62,0	1/1:5,14:18:32.94:381,33,0	0/0:18,0:18:38.59:0,39,625	0/0:45,2:47:34.36:0,34,1336	1/1:6,7:13:30.09:367,30,0	1/1:4,28:30:62.54:739,63,0	1/1:4,6:8:18.06:220,18,0	1/1:1,5:5:12.04:147,12,0
chr10	64586856	.	C	CACACAT	2297.23	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-3.902;DP=880;FS=14.271;HRun=0;HaplotypeScore=225.3435;InbreedingCoeff=0.9223;MQ=49.03;MQ0=42;MQRankSum=-4.472;QD=24.44;ReadPosRankSum=-3.668;VQSLOD=1.2973;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,103,2136	0/0:3,0:3:9.01:0,9,162	0/0:92,0:14:35.70:0,36,463	0/0:80,0:9:17.80:0,18,328	1/1:8,6:14:5.52:69,6,0	0/0:25,0:25:56.92:0,57,1093	0/0:29,0:27:75.23:0,75,1536	1/1:15,26:41:27.27:1051,27,0	1/1:16,18:31:45.12:1311,45,0	0/0:32,0:30:84.28:0,84,1773	0/0:12,0:11:26.83:0,27,602	0/0:31,0:31:78.54:0,79,1727	0/0:16,0:16:48.13:0,48,987	0/0:23,0:19:38.94:0,39,878	0/0:27,0:26:69.19:0,69,1493	0/0:38,0:37:99:0,105,2208	0/0:40,0:38:79.87:0,80,1857	0/0:29,0:28:24.53:0,25,1136	0/0:30,0:23:63.07:0,63,1024	0/0:16,0:15:33.11:0,33,716	0/0:73,0:69:99:0,147,2920	0/0:22,0:20:51.60:0,52,1031	0/0:18,0:16:45.12:0,45,922	0/0:45,0:45:49.52:0,50,2037	0/0:17,0:17:38.91:0,39,701	0/0:25,0:21:57.18:0,57,1174	0/0:13,0:13:38.98:0,39,728	0/0:7,0:6:12.04:0,12,276
chr10	64586882	.	GAC	G	66.06	PASS	AB=0.933;AC=7;AF=0.125;AN=56;BaseQRankSum=6.427;DP=774;FS=2.190;HRun=0;HaplotypeScore=147.9355;InbreedingCoeff=0.1236;MQ=53.85;MQ0=21;MQRankSum=0.311;QD=0.46;ReadPosRankSum=-1.578;VQSLOD=2.3882;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:30.15:0,30,863	0/0:4,0:4:12.04:0,12,170	0/0:66,0:15:18.04:0,18,211	0/0:64,0:11:3.01:0,3,34	1/1:10,0:10:7.45:19,7,0	0/1:21,1:22:10.83:11,0,438	0/1:29,3:31:85.79:86,0,667	0/0:31,0:29:37.86:0,38,564	0/1:24,1:23:7.20:7,0,129	0/0:26,1:27:8.66:0,9,539	0/0:10,0:10:12.04:0,12,173	0/0:31,0:31:62.90:0,63,932	0/0:19,0:19:45.10:0,45,622	0/0:30,1:30:44.05:0,44,1077	0/0:32,0:32:39.24:0,39,1022	0/0:39,0:39:73.99:0,74,1286	0/0:31,0:31:46.08:0,46,889	0/1:29,2:32:11.44:11,0,898	0/0:25,0:19:36.11:0,36,499	0/0:13,0:12:24.08:0,24,313	0/0:56,3:56:25.47:0,25,1185	0/0:18,0:17:30.69:0,31,498	0/0:15,0:14:24.07:0,24,334	0/0:40,0:40:88.09:0,88,1319	0/0:17,0:17:35.73:0,36,538	0/1:20,2:22:54.81:55,0,586	0/0:15,0:15:30.10:0,30,468	0/0:10,0:10:24.04:0,24,334
chr10	64586897	.	ACAC	A	754.90	PASS	AB=0.639;AC=5;AF=0.089;AN=56;BaseQRankSum=5.651;DP=693;FS=0.880;HRun=0;HaplotypeScore=126.3936;InbreedingCoeff=0.6057;MQ=55.81;MQ0=20;MQRankSum=-1.937;QD=13.48;ReadPosRankSum=-1.246;VQSLOD=3.2331;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:30:36.12:0,36,719	0/0:4,0:4:6.02:0,6,120	0/0:54,0:8:2.99:0,3,25	0/0:65,0:15:15.50:0,16,167	1/1:2,7:9:18.06:252,18,0	0/0:21,0:20:18.06:0,18,359	0/0:25,0:25:55.28:0,55,884	1/1:20,4:22:18.06:242,18,0	0/1:10,13:21:11.66:387,0,12	0/0:18,0:18:23.91:0,24,397	0/0:7,0:7:9.03:0,9,178	0/0:27,0:27:45.14:0,45,879	0/0:19,0:19:42.14:0,42,758	0/0:32,0:31:63.21:0,63,1153	0/0:27,0:28:50.66:0,51,933	0/0:37,0:37:87.28:0,87,1562	0/0:33,0:33:60.20:0,60,1101	0/0:28,0:28:55.92:0,56,991	0/0:23,0:18:28.29:0,28,438	0/0:11,0:10:2.97:0,3,20	0/0:51,0:49:33.58:0,34,1047	0/0:14,0:13:6.57:0,7,440	0/0:11,0:11:18.06:0,18,323	0/0:41,0:41:87.30:0,87,1577	0/0:16,0:16:30.57:0,31,580	0/0:18,0:19:35.48:0,35,632	0/0:11,0:11:30.10:0,30,560	0/0:11,0:11:21.07:0,21,399
chr10	64589005	.	GACGCAC	G	2797.22	PASS	AB=0.500;AC=5;AF=0.089;AN=56;BaseQRankSum=5.483;DP=828;FS=6.449;HRun=0;HaplotypeScore=255.6636;InbreedingCoeff=0.8844;MQ=60.34;MQ0=0;MQRankSum=-4.805;QD=34.11;ReadPosRankSum=-4.168;VQSLOD=2.0027;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,111,3660	0/0:3,0:3:6.02:0,6,212	0/0:45,0:36:60.55:0,61,2121	0/0:54,0:46:82.62:0,83,3295	0/1:0,17:17:0:0,0,0	0/0:25,0:25:26.92:0,27,892	0/0:38,0:38:84.11:0,84,2329	1/1:2,36:38:99:2343,108,0	1/1:1,26:27:23.17:575,23,0	0/0:40,0:40:99:0,117,3936	0/0:20,0:20:39.11:0,39,1257	0/0:35,0:35:46.50:0,46,1518	0/0:23,0:23:63.22:0,63,2181	0/0:18,0:18:33.02:0,33,1115	0/0:34,0:34:50.98:0,51,1629	0/0:30,0:31:72:0,72,2227	0/0:25,0:25:56.80:0,57,1897	0/0:15,0:15:39.13:0,39,1246	0/0:17,0:17:48.16:0,48,1460	0/0:37,0:37:65.86:0,66,2031	0/0:63,0:63:96.61:0,97,2981	0/0:25,0:25:33.02:0,33,1057	0/0:18,0:18:48.12:0,48,1589	0/0:52,0:52:99:0,135,4363	0/0:17,0:17:27.02:0,27,795	0/0:35,0:34:99:0,102,3348	0/0:23,0:23:47.45:0,47,1557	0/0:11,0:11:30.07:0,30,903
chr10	64589042	.	AGATG	A	1412.73	PASS	AB=0.993;AC=23;AF=0.426;AN=54;BaseQRankSum=4.485;DP=647;FS=33.708;HRun=0;HaplotypeScore=226.4584;InbreedingCoeff=0.1459;MQ=53.42;MQ0=6;MQRankSum=0.152;QD=4.18;ReadPosRankSum=-5.128;VQSLOD=-0.0292;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:91.23:0,91,2733	./.	0/0:42,0:29:44.35:0,44,1820	0/0:53,0:33:84.11:0,84,2202	0/0:19,0:19:9:0,9,231	1/1:17,2:19:5.38:49,5,0	0/1:19,0:19:9.51:195,0,10	0/0:35,0:34:99:0,102,2665	0/0:24,0:24:26.95:0,27,737	0/1:23,0:23:86.29:86,0,167	0/1:11,0:11:11.41:47,0,11	0/1:28,1:29:24.75:25,0,47	0/0:15,0:15:42.11:0,42,1017	1/1:11,0:11:6.77:68,7,0	1/1:26,0:26:5.12:141,5,0	1/1:16,0:16:4.41:86,4,0	0/1:20,0:20:11.67:12,0,172	0/1:10,0:10:75.02:169,0,75	0/1:11,0:11:77.14:128,0,77	0/1:24,1:25:0.82:61,0,1	1/1:50,1:51:10.85:180,11,0	1/1:25,0:25:7.14:205,7,0	0/0:17,0:17:39.13:0,39,1110	0/0:42,0:42:99:0,111,3112	0/1:13,0:13:0.47:8,0,0	0/1:24,0:24:94.92:95,0,180	0/0:21,0:21:2.05:0,2,87	0/1:5,0:5:9:30,0,9
chr10	64589044	.	ATG	A	885.03	PASS	AB=0.945;AC=22;AF=0.407;AN=54;BaseQRankSum=5.776;DP=638;FS=21.801;HRun=0;HaplotypeScore=207.3021;InbreedingCoeff=0.2569;MQ=51.40;MQ0=8;MQRankSum=0.282;QD=2.87;ReadPosRankSum=-3.114;VQSLOD=0.9711;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,1:38:81.14:0,81,1840	./.	0/0:43,0:28:44.39:0,44,1298	0/0:55,0:32:80.44:0,80,1567	0/0:19,0:19:9:0,9,170	0/1:17,1:18:0.05:1,0,0	1/1:18,1:19:8.69:141,9,0	0/0:34,0:33:99:0,99,1822	0/0:23,0:23:26.98:0,27,512	0/1:22,1:23:69.78:70,0,72	0/1:11,0:11:2.50:25,0,2	0/1:27,1:28:8.92:9,0,39	0/0:15,0:15:14.23:0,14,627	0/1:10,0:10:5.19:34,0,5	1/1:25,1:26:2.93:71,3,0	1/1:15,0:15:3.74:37,4,0	0/0:19,1:20:10.66:0,11,110	0/1:10,0:10:38.36:86,0,38	0/1:6,5:11:36.19:126,0,36	1/1:23,2:25:3.01:68,3,0	1/1:41,4:45:5.79:63,6,0	1/1:23,2:25:8.53:150,9,0	0/0:16,0:16:39.13:0,39,770	0/0:42,1:43:99:0,108,2159	0/1:13,0:13:1.35:1,0,2	0/1:21,3:24:93.26:138,0,93	0/0:21,0:21:14.36:0,14,70	0/1:5,0:5:8.03:28,0,8
chr10	64589053	.	C	CAG	251.81	PASS	AB=0.945;AC=11;AF=0.204;AN=54;BaseQRankSum=8.594;DP=610;FS=27.924;HRun=0;HaplotypeScore=203.0322;InbreedingCoeff=-0.0761;MQ=48.43;MQ0=8;MQRankSum=-6.213;QD=1.37;ReadPosRankSum=-2.122;VQSLOD=0.6990;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:33:81.14:0,81,1075	./.	0/0:34,0:19:38.52:0,39,595	0/0:47,0:23:32.35:0,32,612	0/0:18,0:18:17.98:0,18,197	1/1:17,0:17:2.71:17,3,0	0/1:16,0:16:3.48:3,0,57	0/0:33,0:32:72.08:0,72,907	0/0:24,0:24:21.07:0,21,299	0/0:27,0:27:22.58:0,23,292	0/0:9,1:10:3:0,3,25	0/1:28,0:28:32.52:53,0,33	0/0:15,0:14:36.04:0,36,439	0/1:10,0:10:0.03:0,0,0	0/0:22,1:23:5.69:0,6,43	0/0:14,0:14:5.97:0,6,46	0/1:17,3:20:99:126,0,102	0/1:10,1:11:44.05:67,0,44	0/1:11,1:12:33.60:34,0,78	0/1:22,2:24:6.05:6,0,60	0/0:36,5:41:4.91:0,5,48	0/0:20,1:21:2.99:0,3,24	0/0:16,0:16:39.13:0,39,557	0/0:49,0:49:99:0,120,1612	0/0:13,1:14:5.80:0,6,47	0/1:23,1:24:36.84:37,0,330	0/1:20,2:22:38.58:39,0,110	0/0:5,0:5:4.25:0,4,32
chr10	64589056	.	ACG	A	424.33	PASS	AB=0.880;AC=12;AF=0.222;AN=54;BaseQRankSum=7.310;DP=569;FS=33.650;HRun=0;HaplotypeScore=178.2917;InbreedingCoeff=-0.1004;MQ=47.79;MQ0=9;MQRankSum=-5.837;QD=2.37;ReadPosRankSum=1.168;VQSLOD=0.9000;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:30.17:0,30,1185	./.	0/0:32,0:17:44.57:0,45,853	0/0:45,0:21:42.96:0,43,779	0/1:17,0:17:4.29:4,0,191	1/1:13,3:16:5.05:40,5,0	0/1:11,3:14:22.81:23,0,187	0/0:28,0:27:69.22:0,69,1250	0/0:23,0:23:23.52:0,24,323	0/0:24,0:24:7.50:0,7,597	0/0:8,2:9:5.05:0,5,41	0/1:19,7:26:64.13:64,0,68	0/1:14,0:13:31.58:32,0,452	0/1:7,2:9:0:0,0,0	0/0:17,4:21:7.81:0,8,90	0/0:7,7:14:5.89:0,6,82	0/1:15,3:19:99:121,0,195	0/1:9,1:10:94.30:94,0,103	0/1:9,1:10:23.36:23,0,162	0/0:17,2:19:8.72:0,9,160	0/0:29,9:38:5.97:0,6,101	0/0:12,7:19:5.05:0,5,65	0/0:16,0:17:39.12:0,39,689	0/0:47,0:47:83.80:0,84,2117	0/0:12,1:13:8.06:0,8,127	0/1:19,3:22:84.77:85,0,649	0/1:18,4:22:76.58:77,0,229	0/0:5,0:5:5.87:0,6,36
chr10	64589057	.	CGT	C	161.72	PASS	AB=0.986;AC=13;AF=0.241;AN=54;BaseQRankSum=5.977;DP=557;FS=32.573;HRun=0;HaplotypeScore=174.6329;InbreedingCoeff=-0.1469;MQ=46.58;MQ0=9;MQRankSum=-4.317;QD=0.79;ReadPosRankSum=0.850;VQSLOD=1.4526;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:28,3:31:15.42:15,0,807	./.	0/0:30,0:16:44.16:0,44,727	0/0:44,0:20:46.77:0,47,670	0/1:18,0:18:44.72:45,0,136	1/1:16,0:16:4.12:19,4,0	0/1:14,0:14:6.15:6,0,144	0/0:26,0:25:60.13:0,60,992	0/0:22,0:22:13.49:0,13,221	0/0:26,0:26:27.80:0,28,473	0/0:10,0:9:4.72:0,5,17	0/1:24,0:24:16.21:16,0,45	0/1:13,1:13:58.32:58,0,341	0/1:8,0:8:0:0,0,0	0/0:21,0:21:4.81:0,5,50	0/0:14,0:14:2.90:0,3,43	0/1:18,0:18:44.34:44,0,126	0/1:10,0:10:38.57:39,0,70	0/1:9,0:9:5.52:6,0,91	0/0:18,0:18:12.08:0,12,112	0/0:38,0:38:5.95:0,6,54	0/0:19,0:19:5.05:0,5,48	0/0:17,0:17:38.32:0,38,527	0/0:45,2:47:65.62:0,66,1680	0/0:12,0:12:8.06:0,8,95	0/1:22,0:22:24.88:25,0,488	0/1:22,0:22:27.41:27,0,153	0/0:5,0:5:5.44:0,5,43
chr10	64589059	.	TACACACAC	T	1095.89	PASS	AB=0.939;AC=19;AF=0.380;AN=50;BaseQRankSum=7.053;DP=553;FS=14.682;HRun=0;HaplotypeScore=198.3564;InbreedingCoeff=0.4717;MQ=46.18;MQ0=13;MQRankSum=-5.606;QD=6.19;ReadPosRankSum=-1.039;VQSLOD=1.6466;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:30:36.07:0,36,654	0/1:3,0:3:0:0,0,0	./.	./.	0/0:15,0:18:24.05:0,24,330	1/1:12,3:15:1.32:58,1,0	1/1:12,2:14:2.65:64,3,0	0/0:27,0:25:13.28:0,13,198	0/0:19,0:21:15.02:0,15,231	1/1:13,0:24:2.86:61,3,0	0/0:9,2:9:2.04:0,2,6	1/1:17,6:23:9.50:161,10,0	0/0:15,0:15:24.97:0,25,699	0/0:6,2:8:2.46:0,2,14	0/0:16,4:20:2.51:0,3,7	0/0:6,7:13:0:0,0,0	1/1:16,1:18:0.19:164,0,0	0/1:10,1:11:23.84:179,0,24	1/1:7,1:8:5.81:83,6,0	0/1:16,2:18:1.14:44,0,1	0/0:36,3:39:0.94:0,1,2	0/0:12,7:19:0.72:0,1,3	0/0:17,0:18:24.08:0,24,713	0/0:44,0:47:63.69:0,64,2099	0/0:11,1:12:2.51:0,3,7	1/1:18,3:21:15.04:262,15,0	1/1:17,4:21:5.55:164,6,0	./.
chr10	64589093	.	C	CGT	5752.47	PASS	AB=0.571;AC=35;AF=0.648;AN=54;BaseQRankSum=8.383;DP=628;FS=24.976;HRun=0;HaplotypeScore=165.9190;InbreedingCoeff=0.8776;MQ=49.32;MQ0=13;MQRankSum=-3.126;QD=16.30;ReadPosRankSum=2.328;VQSLOD=3.2760;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:43:99:0,99,1294	1/1:10,0:9:8.19:144,8,0	0/0:25,0:15:45.13:0,45,634	0/0:25,0:16:48.16:0,48,751	0/0:24,0:24:42.08:0,42,560	1/1:10,0:9:7.34:154,7,0	1/1:23,0:23:32.95:509,33,0	0/0:36,0:35:99:0,105,1394	0/0:28,0:28:51.12:0,51,700	1/1:21,0:20:39.39:534,39,0	1/1:15,1:14:6.02:96,6,0	1/1:8,13:22:12.03:197,12,0	0/0:22,0:21:59.97:0,60,838	1/1:18,0:18:27.09:403,27,0	1/1:20,1:21:24.07:365,24,0	1/1:28,0:28:42.02:642,42,0	1/1:8,15:23:1.94:228,2,0	1/1:4,10:15:16.67:270,17,0	1/1:8,1:8:21.07:308,21,0	1/1:15,2:17:21.06:321,21,0	0/1:14,42:55:0:1,0,0	1/1:18,1:19:20.79:316,21,0	0/0:18,0:18:39.09:0,39,540	0/0:36,0:36:86.77:0,87,1285	./.	1/1:20,2:21:57.02:811,57,0	1/1:19,2:21:27.09:377,27,0	1/1:2,0:2:6.02:75,6,0
chr10	64589241	.	AG	A	6444.28	PASS	AB=0.721;AC=44;AF=0.786;AN=56;BaseQRankSum=1.203;DP=482;FS=0.000;HRun=10;HaplotypeScore=65.5562;InbreedingCoeff=0.6540;MQ=68.56;MQ0=1;MQRankSum=-3.546;QD=15.95;ReadPosRankSum=5.520;VQSLOD=5.1406;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:8:5.80:0,6,33	1/1:4,5:9:11.96:103,12,0	0/0:15,1:16:0.65:0,1,205	0/0:14,0:14:29.61:0,30,265	1/1:3,0:19:28.99:84,29,0	1/1:0,11:11:26.99:234,27,0	1/1:5,20:25:59.94:521,60,0	1/1:2,0:12:21.63:70,22,0	1/1:1,0:15:28.52:83,29,0	1/1:6,20:26:53.87:449,54,0	0/1:4,5:9:18.19:89,0,18	1/1:3,18:21:50.99:443,51,0	0/0:12,1:13:3.51:0,4,239	1/1:5,14:19:38.99:338,39,0	1/1:4,26:30:59.92:513,60,0	1/1:4,16:20:41.94:364,42,0	1/1:4,11:15:32.97:286,33,0	1/1:3,15:18:41.99:365,42,0	1/1:3,6:9:17.97:152,18,0	1/1:5,9:14:23.98:208,24,0	1/1:12,36:48:89.96:781,90,0	1/1:2,13:15:26.99:234,27,0	0/1:9,3:12:57:57,0,89	0/0:25,0:25:60.08:0,60,609	1/1:4,8:12:23.02:188,23,0	1/1:2,16:18:41.94:354,42,0	1/1:5,16:21:44.99:391,45,0	1/1:0,5:6:17.03:136,17,0
chr10	64590995	.	GA	G	576.18	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.736;DP=700;FS=6.591;HRun=1;HaplotypeScore=73.2526;InbreedingCoeff=0.9752;MQ=84.92;MQ0=0;MQRankSum=-0.869;QD=36.01;ReadPosRankSum=0.322;VQSLOD=3.7931;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:39:99:0,117,1814	0/0:8,0:8:24.08:0,24,384	0/0:27,0:28:73.52:0,74,1273	0/0:24,0:22:57.15:0,57,864	0/0:13,0:13:39.13:0,39,623	0/0:13,0:13:36.12:0,36,575	0/0:42,0:42:99:0,123,1940	0/0:18,0:18:54.18:0,54,843	1/1:0,16:16:48.16:671,48,0	0/0:19,0:19:57.19:0,57,911	0/0:10,0:10:27.09:0,27,432	0/0:36,0:36:99:0,105,1664	0/0:28,0:28:84.29:0,84,1338	0/0:34,0:34:90.31:0,90,1431	0/0:30,0:30:75.21:0,75,1171	0/0:38,0:38:99:0,111,1745	0/0:46,0:46:99:0,129,2025	0/0:32,0:32:93.32:0,93,1483	0/0:20,0:20:60.20:0,60,958	0/0:14,0:14:39.13:0,39,623	0/0:87,0:87:99:0,250,3941	0/0:12,0:12:33.11:0,33,527	0/0:8,0:8:21.06:0,21,304	0/0:40,0:40:99:0,105,1669	0/0:13,0:13:39.13:0,39,622	0/0:18,0:17:48.16:0,48,768	0/0:5,0:5:15.05:0,15,240	0/0:8,0:8:24.07:0,24,357
chr10	64591168	.	CGTGTGTGT	C	762.96	PASS	AB=0.980;AC=3;AF=0.054;AN=56;BaseQRankSum=4.203;DP=859;FS=0.000;HRun=0;HaplotypeScore=306.9314;InbreedingCoeff=0.5410;MQ=56.11;MQ0=15;MQRankSum=-3.670;QD=8.87;ReadPosRankSum=-1.286;VQSLOD=1.3759;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,102,3376	0/0:7,0:7:15.53:0,16,106	0/0:44,0:26:22.27:0,22,261	0/0:27,0:16:5.81:0,6,110	1/1:19,18:37:18.58:853,19,0	0/0:18,0:18:30.66:0,31,373	0/0:32,0:32:44.03:0,44,454	0/0:58,0:59:39.95:0,40,446	0/0:18,0:34:43.01:0,43,439	0/0:41,0:38:61.20:0,61,926	0/0:21,0:21:32.04:0,32,411	0/0:41,0:40:54.74:0,55,611	0/0:32,0:33:78.25:0,78,2605	0/0:28,0:26:29.09:0,29,250	0/0:43,0:42:42.25:0,42,586	0/1:48,1:47:5.92:6,0,749	0/0:31,0:30:39.13:0,39,489	0/0:16,0:16:31.22:0,31,417	0/0:28,0:25:35.91:0,36,621	0/0:19,0:19:30:0,30,403	0/0:40,0:38:29.48:0,29,312	0/0:30,0:29:30.18:0,30,408	0/0:14,0:18:47.80:0,48,1197	0/0:34,0:34:81.22:0,81,2733	0/0:21,0:20:25.98:0,26,235	0/0:35,0:34:67.80:0,68,1055	0/0:19,0:18:22.45:0,22,302	0/0:6,0:6:0.77:0,1,15
chr10	64591197	.	GTA	G	2167.16	PASS	AB=0.980;AC=26;AF=0.464;AN=56;BaseQRankSum=1.606;DP=861;FS=60.180;HRun=0;HaplotypeScore=256.2466;InbreedingCoeff=-0.7233;MQ=44.67;MQ0=23;MQRankSum=-2.057;QD=2.98;ReadPosRankSum=-0.989;VQSLOD=0.3983;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:48:68.18:0,68,1595	0/1:6,1:7:20.23:22,0,20	1/1:20,0:7:6.90:25,7,0	0/1:28,0:7:11.68:12,0,25	0/1:30,0:29:13.20:204,0,13	0/1:15,1:15:71.36:71,0,76	0/1:33,1:35:97.23:97,0,219	0/1:48,0:36:99:246,0,157	0/1:50,0:50:49.26:49,0,219	0/1:33,0:30:99:159,0,248	0/1:17,0:17:36.48:75,0,36	0/1:41,1:41:80.62:81,0,210	0/0:37,0:35:71.23:0,71,1218	0/1:27,1:25:99:122,0,110	0/1:43,0:42:99:151,0,158	0/1:54,0:49:99:187,0,253	0/1:24,2:23:99:111,0,116	0/1:17,0:16:72.97:73,0,111	0/1:22,0:14:33.89:34,0,141	0/1:18,0:17:55.84:131,0,56	0/1:52,1:50:51.53:52,0,364	0/1:29,0:27:99:136,0,127	0/1:22,0:21:28.20:28,0,406	0/0:43,0:43:78.87:0,79,1431	0/1:18,0:17:37.96:45,0,38	0/1:38,0:34:99:184,0,344	0/1:22,1:22:14.09:14,0,242	0/1:10,1:10:14.87:15,0,99
chr10	64591207	.	GTTTA	G	2618.10	PASS	AB=0.987;AC=20;AF=0.357;AN=56;BaseQRankSum=4.302;DP=851;FS=62.836;HRun=0;HaplotypeScore=283.3161;InbreedingCoeff=-0.4399;MQ=45.12;MQ0=21;MQRankSum=-3.769;QD=5.42;ReadPosRankSum=-1.293;VQSLOD=0.5987;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:51:99:0,125,2579	0/1:6,1:7:30.43:30,0,118	1/1:12,3:3:9.03:123,9,0	0/0:27,0:5:8.35:0,8,143	0/0:33,0:33:5.44:0,5,436	0/1:18,0:17:99:125,0,478	0/1:30,0:31:88.77:89,0,839	0/0:38,0:27:7.39:0,7,1146	0/0:53,0:53:0.72:0,1,973	0/1:36,0:33:99:290,0,1157	0/1:16,0:16:82.52:83,0,204	0/1:44,0:42:99:282,0,827	0/0:42,0:40:99:0,114,2560	0/1:30,0:27:99:123,0,745	0/1:39,1:40:99:308,0,807	0/1:55,2:53:99:366,0,1309	0/1:23,0:19:99:192,0,420	0/1:14,0:14:59.14:59,0,478	0/1:20,0:11:2.30:2,0,554	0/1:14,0:13:99:101,0,316	0/0:46,0:42:25.18:0,25,1619	0/1:29,0:27:99:216,0,570	0/0:23,0:23:63.16:0,63,1441	0/0:48,0:48:99:0,100,2971	0/1:17,0:16:99:119,0,200	0/1:34,0:30:99:160,0,964	0/1:23,0:22:62.40:62,0,928	0/1:13,0:12:46.10:46,0,535
chr10	64591211	.	ATG	A	351.33	PASS	AB=0.917;AC=3;AF=0.054;AN=56;BaseQRankSum=8.926;DP=842;FS=9.869;HRun=0;HaplotypeScore=272.8364;InbreedingCoeff=-0.0616;MQ=45.17;MQ0=22;MQRankSum=-8.512;QD=3.62;ReadPosRankSum=-3.358;VQSLOD=0.5669;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:51:63.04:0,63,424	0/0:8,0:8:16.49:0,16,85	0/0:20,0:5:6.02:0,6,100	0/0:27,0:5:12.04:0,12,197	0/0:32,0:32:24.08:0,24,388	0/0:19,0:18:25.69:0,26,148	0/0:29,0:28:15.78:0,16,140	0/0:35,1:26:25.08:0,25,257	0/1:36,18:54:99:425,0,998	0/0:33,0:30:43.19:0,43,319	0/0:14,0:14:9.87:0,10,74	0/0:47,0:45:51.88:0,52,282	0/0:39,0:38:97.36:0,97,1524	0/0:30,0:27:20.48:0,20,92	0/0:38,0:38:23.56:0,24,164	0/0:59,0:54:35.50:0,35,321	0/0:23,0:19:20.60:0,21,119	0/0:12,0:12:16.55:0,17,128	0/1:19,0:10:3.43:3,0,43	0/0:15,0:14:11.52:0,12,69	0/0:42,0:38:53.01:0,53,210	0/0:30,0:28:31.43:0,31,186	0/0:23,0:23:60.19:0,60,925	0/0:48,0:48:99:0,116,1935	0/0:17,0:16:24.44:0,24,119	0/0:31,0:27:6.31:0,6,126	0/1:24,0:23:6.26:6,0,86	0/0:14,0:13:13.60:0,14,61
chr10	64591221	.	GTA	G	4378.02	PASS	AB=0.983;AC=35;AF=0.625;AN=56;BaseQRankSum=5.739;DP=866;FS=12.883;HRun=0;HaplotypeScore=269.1439;InbreedingCoeff=0.2722;MQ=45.47;MQ0=24;MQRankSum=2.357;QD=6.75;ReadPosRankSum=1.299;VQSLOD=2.5221;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:59,0:52:4.76:390,5,0	0/1:9,1:10:1.01:24,0,1	0/0:32,0:2:6.02:0,6,98	0/0:35,0:7:20.99:0,21,297	0/0:37,0:36:0.71:0,1,424	0/1:21,0:20:18.81:118,0,19	1/1:31,0:31:3.04:134,3,0	0/1:30,0:24:22.81:176,0,23	0/1:62,0:62:99:167,0,1115	1/1:29,0:27:33.17:276,33,0	0/1:13,1:15:20.93:51,0,21	1/1:47,0:45:32.37:225,32,0	0/0:36,0:35:63.41:0,63,1607	1/1:24,1:22:42.75:229,43,0	1/1:37,0:37:33.74:247,34,0	0/1:55,0:50:30.52:475,0,31	0/1:21,0:17:45.30:101,0,45	0/1:16,0:15:49.11:121,0,49	1/1:17,0:12:32.32:199,32,0	0/1:14,0:14:0.36:84,0,0	1/1:41,0:37:69.82:427,70,0	1/1:29,1:29:13.78:133,14,0	0/0:26,0:26:65.41:0,65,948	0/0:51,0:51:99:0,123,2039	1/1:17,0:17:17.49:84,17,0	1/1:29,1:27:44.70:253,45,0	1/1:22,2:24:52.58:336,53,0	1/1:12,0:12:23.06:129,23,0
chr10	64591223	.	ATG	A	10440.11	PASS	AB=0.718;AC=37;AF=0.661;AN=56;BaseQRankSum=-0.912;DP=863;FS=8.999;HRun=0;HaplotypeScore=244.1695;InbreedingCoeff=0.4093;MQ=45.39;MQ0=27;MQRankSum=1.183;QD=17.09;ReadPosRankSum=0.996;VQSLOD=3.4787;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:31,29:53:87.16:1091,87,0	0/1:5,6:11:6.80:69,0,7	0/0:38,0:2:6.02:0,6,102	0/0:37,0:7:21.07:0,21,333	0/1:37,0:36:46.98:47,0,377	0/1:9,12:20:16.73:282,0,17	1/1:11,20:30:20.13:420,20,0	1/1:18,12:23:45.14:580,45,0	0/0:63,0:63:47.16:0,47,1124	1/1:10,17:25:40.51:726,41,0	0/1:7,8:15:10.02:141,0,10	1/1:18,24:40:10.70:509,11,0	0/0:36,0:35:93.30:0,93,1545	1/1:11,14:22:43.37:548,43,0	1/1:9,23:32:32.28:568,32,0	0/1:28,26:50:56.50:976,0,56	0/1:10,10:16:28.27:246,0,28	0/1:12,6:17:37.80:316,0,38	1/1:6,10:12:27.18:347,27,0	1/1:8,8:15:2.11:272,2,0	1/1:16,27:39:87.08:1123,87,0	1/1:14,16:28:26.91:338,27,0	0/0:25,0:25:44.68:0,45,842	0/0:53,0:53:99:0,105,1999	1/1:13,4:16:18.06:234,18,0	1/1:8,21:25:47.18:590,47,0	1/1:11,15:25:57.63:707,58,0	1/1:1,10:11:24.08:312,24,0
chr10	64591233	.	GTA	G	3761.30	PASS	AB=0.993;AC=30;AF=0.536;AN=56;BaseQRankSum=7.330;DP=857;FS=16.697;HRun=0;HaplotypeScore=254.2652;InbreedingCoeff=-0.0075;MQ=45.80;MQ0=45;MQRankSum=1.429;QD=6.22;ReadPosRankSum=6.497;VQSLOD=1.6858;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:51,1:45:61.54:407,62,0	0/1:12,0:12:9.35:41,0,9	0/0:45,0:2:6.02:0,6,116	0/0:37,0:7:21.07:0,21,391	0/1:37,0:36:0.77:1,0,431	0/1:21,0:20:10.17:94,0,10	0/1:30,0:29:43.80:126,0,44	0/1:32,0:23:99:161,0,100	0/0:58,0:58:99:0,112,1546	1/1:28,0:26:13.61:284,14,0	1/1:15,0:15:11.60:71,12,0	0/1:37,1:37:46.39:190,0,46	0/0:38,0:37:99:0,102,1818	0/1:26,1:24:42.77:182,0,43	1/1:31,0:32:8.14:217,8,0	0/1:51,2:48:80.45:443,0,80	0/1:17,0:13:18.33:91,0,18	0/1:18,0:17:89.17:107,0,89	0/1:20,0:14:34.18:135,0,34	1/1:14,0:13:20.02:117,20,0	0/1:51,0:47:14.75:343,0,15	1/1:24,1:24:3.85:130,4,0	0/0:21,0:21:20.21:0,20,938	0/0:53,0:53:99:0,129,2305	0/1:16,0:15:28.07:58,0,28	0/1:31,0:27:56.93:188,0,57	1/1:26,0:25:30.95:254,31,0	1/1:10,0:10:23.01:122,23,0
chr10	64591250	.	CGT	C	619	PASS	AB=0.794;AC=2;AF=0.036;AN=56;BaseQRankSum=5.244;DP=967;FS=0.714;HRun=0;HaplotypeScore=244.1001;InbreedingCoeff=-0.0402;MQ=48.12;MQ0=70;MQRankSum=-3.220;QD=8.72;ReadPosRankSum=0.188;VQSLOD=3.2440;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:52:99:0,102,1664	0/0:12,0:12:18.03:0,18,257	0/0:60,0:1:2.97:0,3,20	0/0:55,0:5:8.94:0,9,98	0/0:36,0:35:43.28:0,43,466	0/0:18,0:17:42.12:0,42,621	0/0:33,1:33:54.14:0,54,791	0/0:42,0:28:60.05:0,60,669	0/1:26,30:56:99:692,0,186	0/0:29,0:27:40.87:0,41,834	0/0:16,0:16:24.33:0,24,394	0/0:38,0:38:72.16:0,72,1052	0/0:40,0:39:98.82:0,99,1471	0/0:35,0:32:78.67:0,79,1214	0/0:37,0:37:71.95:0,72,1056	0/0:49,1:46:65.60:0,66,1484	0/0:26,0:23:42.12:0,42,647	0/0:20,1:20:12.93:0,13,679	0/0:24,0:17:35.98:0,36,510	0/1:14,1:14:10.75:11,0,347	0/0:81,1:77:99:0,107,2172	0/0:26,0:25:41.91:0,42,662	0/0:20,0:20:50.96:0,51,792	0/0:44,1:45:24.13:0,24,1455	0/0:14,0:14:33.09:0,33,493	0/0:38,0:34:58.39:0,58,1315	0/0:25,0:25:66.69:0,67,1055	0/0:14,0:14:33.11:0,33,541
chr10	64591277	.	ATG	A	537.28	PASS	AB=0.857;AC=4;AF=0.071;AN=56;BaseQRankSum=3.775;DP=1123;FS=19.968;HRun=0;HaplotypeScore=229.8441;InbreedingCoeff=-0.0695;MQ=49.07;MQ0=83;MQRankSum=-3.866;QD=3.11;ReadPosRankSum=-3.992;VQSLOD=0.7556;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:68,1:62:99:0,143,2192	0/0:15,0:14:27.09:0,27,434	0/0:71,0:6:18.02:0,18,269	0/0:74,0:10:26.95:0,27,336	0/1:16,18:33:99:209,0,322	0/0:23,0:23:56.85:0,57,870	0/0:40,0:38:74.51:0,75,1156	0/1:59,8:50:99:389,0,816	0/1:48,4:51:38.65:39,0,562	0/0:29,0:27:70.52:0,71,1184	0/0:19,0:19:48.15:0,48,766	0/0:47,0:45:90.26:0,90,1436	0/0:44,0:44:99:0,120,1906	0/0:35,0:34:84.82:0,85,1320	0/0:39,0:39:93.67:0,94,1401	0/0:52,0:49:99:0,141,2247	0/0:31,0:28:61.04:0,61,890	0/0:26,1:24:31.91:0,32,901	0/0:31,1:25:30:0,30,797	0/1:19,1:16:2.06:2,0,492	0/0:93,2:90:99:0,189,2966	0/0:35,0:34:78.23:0,78,1228	0/0:18,0:18:35.65:0,36,759	0/0:52,5:57:94.17:0,94,1985	0/0:15,0:15:39.13:0,39,636	0/0:41,0:39:66.87:0,67,1509	0/0:23,0:23:27.82:0,28,774	0/0:19,0:19:35.15:0,35,545
chr10	64591353	.	A	ATG	785.88	PASS	AB=0.971;AC=6;AF=0.107;AN=56;BaseQRankSum=2.213;DP=1020;FS=0.711;HRun=0;HaplotypeScore=218.6571;InbreedingCoeff=0.6309;MQ=51.67;MQ0=57;MQRankSum=-1.271;QD=6.19;ReadPosRankSum=-3.127;VQSLOD=2.8711;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:56,0:53:4.05:4,0,291	0/0:9,0:8:17.97:0,18,229	0/0:46,0:14:29.09:0,29,344	0/0:44,0:13:33.10:0,33,411	1/1:12,11:21:34.15:466,34,0	0/0:22,0:22:42.13:0,42,531	0/0:42,0:41:84.24:0,84,1039	0/1:30,2:20:99:137,0,254	1/1:6,10:16:20.41:310,20,0	0/0:57,0:54:99:0,135,1676	0/0:22,0:22:54.16:0,54,686	0/0:48,0:47:99:0,105,1211	0/0:38,0:38:99:0,99,1201	0/0:32,0:30:50.38:0,50,642	0/0:42,0:42:99:0,103,1256	0/0:56,0:54:99:0,113,1506	0/0:30,0:29:78.23:0,78,970	0/0:31,0:29:69.17:0,69,857	0/0:23,0:11:24.08:0,24,303	0/0:23,0:22:5.91:0,6,553	0/0:109,2:107:99:0,221,2747	0/0:46,0:46:99:0,109,1263	0/0:22,0:22:54.10:0,54,652	0/0:69,0:69:99:0,159,1967	0/0:22,0:22:48.15:0,48,602	0/0:25,0:24:46.42:0,46,699	0/0:20,0:21:57.18:0,57,720	0/0:11,0:11:21.07:0,21,267
chr10	64591357	.	G	GTGTGTGTA	442.62	PASS	AB=0.971;AC=3;AF=0.054;AN=56;BaseQRankSum=4.336;DP=1026;FS=15.156;HRun=0;HaplotypeScore=318.9533;InbreedingCoeff=0.7250;MQ=51.92;MQ0=48;MQRankSum=-4.691;QD=4.47;ReadPosRankSum=-3.706;VQSLOD=0.1683;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:17,40:64:19.19:534,19,0	0/0:8,0:8:18.06:0,18,341	0/0:47,0:18:26.88:0,27,606	0/0:49,0:18:36.07:0,36,645	0/0:22,0:20:14.17:0,14,81	0/0:20,0:20:38.90:0,39,625	0/0:37,0:36:36.18:0,36,981	0/1:32,0:23:1.14:1,0,269	0/0:17,0:17:22.15:0,22,119	0/0:54,0:52:99:0,109,1905	0/0:21,0:21:39.57:0,40,674	0/0:47,0:46:75.13:0,75,1302	0/0:40,0:40:75.15:0,75,1636	0/0:34,0:32:45.54:0,46,845	0/0:42,0:42:96.22:0,96,1600	0/0:54,0:52:99:0,108,1762	0/0:31,0:31:66.20:0,66,1211	0/0:32,0:30:60.12:0,60,1027	0/0:20,0:9:24.08:0,24,441	0/0:23,0:22:47.74:0,48,814	0/0:114,0:108:99:0,179,3130	0/0:45,0:45:84.73:0,85,1519	0/0:23,0:23:54.03:0,54,1222	0/0:68,0:68:99:0,137,3160	0/0:23,0:23:42.03:0,42,732	0/0:24,0:23:46.02:0,46,820	0/0:21,0:21:54.10:0,54,948	0/0:11,0:11:12.04:0,12,227
chr10	64591373	.	ATG	A	16108.33	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=4.933;DP=1029;FS=3.403;HRun=0;HaplotypeScore=169.8415;InbreedingCoeff=0.9939;MQ=53.17;MQ0=31;MQRankSum=7.884;QD=24.90;ReadPosRankSum=9.855;VQSLOD=4.9048;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:72,0:71:50.75:0,51,834	1/1:0,9:9:21.07:273,21,0	0/0:51,0:25:50.83:0,51,1030	0/0:43,0:20:56.91:0,57,882	0/0:24,0:22:40.64:0,41,572	1/1:3,21:24:23.61:524,24,0	1/1:9,25:34:39.24:756,39,0	0/0:41,0:33:81.72:0,82,1059	0/0:24,0:24:42.14:0,42,703	1/1:9,39:46:99:1496,117,0	1/1:4,16:20:36.12:468,36,0	1/1:8,33:41:75.05:975,75,0	0/0:40,0:40:99:0,102,1652	1/1:4,33:35:51.45:664,51,0	1/1:6,35:41:90.29:1170,90,0	1/1:4,51:54:86.66:1379,87,0	1/1:3,29:32:75.20:956,75,0	1/1:4,26:29:63.20:819,63,0	1/1:8,15:16:48.15:615,48,0	1/1:3,18:21:47.51:593,48,0	1/1:18,88:101:99:2272,124,0	1/1:3,38:41:87.57:1132,88,0	0/0:23,0:23:57.20:0,57,969	0/0:64,0:64:99:0,156,2617	1/1:1,22:23:31.14:568,31,0	1/1:5,19:23:25.28:634,25,0	1/1:3,23:26:51.16:658,51,0	1/1:4,8:12:12.04:156,12,0
chr10	64591400	.	C	CGTGT	4028.67	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-5.558;DP=1030;FS=7.734;HRun=0;HaplotypeScore=236.1521;InbreedingCoeff=0.9735;MQ=60.23;MQ0=14;MQRankSum=-2.978;QD=38.37;ReadPosRankSum=-3.366;VQSLOD=1.7767;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:68,0:67:72.22:0,72,1205	0/0:10,0:10:24.08:0,24,410	0/0:47,0:32:9.57:0,10,933	0/0:51,0:38:47.60:0,48,1036	1/1:4,20:24:39.73:808,40,0	0/0:23,0:23:39.13:0,39,673	0/0:39,0:39:75.20:0,75,1175	1/1:19,31:49:98.84:1927,99,0	1/1:7,21:29:53.67:1294,54,0	0/0:42,0:42:99:0,102,1697	0/0:17,0:17:36.12:0,36,605	0/0:37,0:37:81.73:0,82,1355	0/0:39,0:39:90.18:0,90,1468	0/0:41,0:40:75.73:0,76,1261	0/0:36,0:36:75.23:0,75,1220	0/0:59,0:60:99:0,110,1983	0/0:38,0:38:75.20:0,75,1229	0/0:23,0:23:19.58:0,20,569	0/0:18,0:18:51.17:0,51,847	0/0:24,0:24:60.14:0,60,970	0/0:97,0:94:99:0,184,2940	0/0:45,0:45:87.19:0,87,1407	0/0:30,0:29:75.13:0,75,1215	0/0:58,0:58:99:0,135,2276	0/0:22,0:22:57.19:0,57,970	0/0:28,0:28:71.58:0,72,1128	0/0:24,0:24:42.14:0,42,715	0/0:7,0:7:15.05:0,15,259
chr10	64591965	.	CTGAGTGTG	C	2698.57	PASS	AB=0.973;AC=19;AF=0.339;AN=56;BaseQRankSum=7.409;DP=574;FS=1.688;HRun=0;HaplotypeScore=165.6508;InbreedingCoeff=-0.2803;MQ=62.05;MQ0=17;MQRankSum=-6.074;QD=8.51;ReadPosRankSum=5.092;VQSLOD=2.5131;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:9.52:0,10,355	1/1:4,0:5:9.02:153,9,0	0/0:24,0:9:19.34:0,19,126	0/0:35,0:18:26:0,26,137	1/1:18,0:16:2.99:23,3,0	0/1:20,1:21:19.43:19,0,99	0/1:18,0:18:99:131,0,133	0/0:28,0:28:17.21:0,17,220	0/1:23,0:23:12.99:13,0,91	0/1:24,1:24:80.17:595,0,80	0/0:14,0:14:11.85:0,12,87	0/1:23,0:23:99:122,0,180	0/0:13,0:13:32.96:0,33,1033	0/1:22,0:22:99:149,0,128	0/1:17,0:16:66.79:162,0,67	0/1:33,0:33:99:333,0,245	0/1:19,0:18:99:241,0,115	0/1:12,0:12:42.91:240,0,43	0/1:13,0:13:76.98:204,0,77	0/1:19,0:19:11.46:11,0,157	0/0:13,1:14:2.68:0,3,11	0/0:15,0:15:5.99:0,6,49	0/0:20,0:16:24.07:0,24,786	0/0:36,0:36:80.01:0,80,2324	0/0:11,2:13:5.74:0,6,38	0/1:19,0:19:99:157,0,186	0/1:18,1:20:99:123,0,165	0/1:6,2:8:31.94:183,0,32
chr10	64591966	.	TGA	T	100.58	PASS	AB=0.967;AC=9;AF=0.161;AN=56;BaseQRankSum=5.226;DP=556;FS=0.000;HRun=0;HaplotypeScore=131.9894;InbreedingCoeff=0.1737;MQ=61.57;MQ0=17;MQRankSum=-2.730;QD=0.73;ReadPosRankSum=0.940;VQSLOD=2.5058;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:40,4:44:41.67:61,0,42	1/1:6,0:5:2.46:52,2,0	0/0:23,0:9:20.58:0,21,129	0/0:33,0:16:26.04:0,26,138	1/1:11,1:10:2.99:23,3,0	0/0:22,0:22:23.13:0,23,149	0/0:17,0:17:17.16:0,17,191	0/0:22,0:22:20.61:0,21,274	0/1:20,2:22:3.38:25,0,3	0/1:27,0:25:38.62:39,0,175	0/0:14,0:14:11.85:0,12,87	0/0:23,0:23:21.16:0,21,211	0/0:13,0:13:19.40:0,19,418	0/0:23,0:23:22.34:0,22,168	0/0:17,0:16:23.56:0,24,164	0/0:33,0:33:40.61:0,41,341	0/0:20,0:19:28.78:0,29,209	0/0:12,0:12:0.77:0,1,62	0/0:12,0:12:15.63:0,16,129	0/0:19,0:19:29.44:0,29,223	0/0:16,0:16:2.54:0,3,11	0/0:13,0:13:5.99:0,6,49	0/0:20,0:16:19.87:0,20,289	0/0:33,1:34:37.71:0,38,822	0/0:12,1:13:6:0,6,51	0/1:18,0:18:6.30:6,0,236	0/0:19,0:19:2.30:0,2,198	0/1:8,0:8:24.57:25,0,37
chr10	64591968	.	AGTGTGTGT	A	4487.52	PASS	AB=1.000;AC=35;AF=0.648;AN=54;BaseQRankSum=2.570;DP=533;FS=1.400;HRun=0;HaplotypeScore=148.3619;InbreedingCoeff=0.6460;MQ=59.83;MQ0=18;MQRankSum=-5.370;QD=14.62;ReadPosRankSum=1.646;VQSLOD=4.2119;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:42:20.90:0,21,330	1/1:6,1:6:6.02:133,6,0	./.	0/0:33,0:16:0:0,0,0	0/0:11,2:11:0:0,0,0	1/1:16,3:20:5.43:88,5,0	1/1:8,4:17:11.69:215,12,0	0/1:21,0:20:0.21:0,0,61	0/0:18,4:22:5.94:0,6,44	1/1:16,7:24:43.35:861,43,0	0/0:5,8:14:0:0,0,0	1/1:15,7:22:10.28:206,10,0	0/0:13,0:13:27.09:0,27,913	1/1:11,7:20:10.05:247,10,0	1/1:8,6:15:17.93:310,18,0	1/1:17,12:31:8.64:545,9,0	1/1:11,7:19:23.98:447,24,0	1/1:6,4:12:15.05:376,15,0	1/1:5,3:9:14.94:316,15,0	1/1:14,5:19:8.98:99,9,0	0/0:13,0:15:0.89:0,1,2	1/1:7,5:12:0.47:1,0,0	0/0:21,0:17:24.08:0,24,838	0/0:32,0:32:68.01:0,68,2066	1/1:7,4:12:2.80:13,3,0	1/1:15,2:17:1.79:218,2,0	1/1:15,3:18:12.01:201,12,0	1/1:4,4:8:9.03:212,9,0
chr10	64591992	.	T	TGTGAGTGAGTGAGAGAGA	2718.86	PASS	AB=0.985;AC=23;AF=0.426;AN=54;BaseQRankSum=2.266;DP=565;FS=5.017;HRun=0;HaplotypeScore=243.3575;InbreedingCoeff=-0.2169;MQ=37.27;MQ0=30;MQRankSum=-4.279;QD=8.12;ReadPosRankSum=-1.065;VQSLOD=2.2328;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:23.77:0,24,476	0/1:10,0:9:8.51:9,0,113	./.	0/0:37,0:2:2.97:0,3,20	0/0:19,0:17:0.20:0,0,0	0/1:16,0:16:59.38:59,0,65	0/1:17,0:17:35.81:137,0,36	0/1:28,0:26:47.18:365,0,47	0/1:17,4:24:31.99:297,0,32	0/1:27,0:25:99:377,0,711	0/0:13,0:13:0:0,0,0	0/1:17,0:17:64.36:64,0,124	0/0:16,0:16:39.13:0,39,1402	0/1:24,0:24:99:109,0,265	1/1:16,0:15:17.59:213,18,0	0/1:30,0:30:99:307,0,119	0/1:17,0:16:99:200,0,254	0/1:11,0:11:90.04:212,0,90	0/1:9,0:9:99:110,0,268	1/1:15,0:15:7.25:81,7,0	0/1:24,0:22:1.35:20,0,1	0/0:19,0:19:3.95:0,4,136	0/0:25,0:21:36.12:0,36,1416	0/0:40,0:40:99:0,99,3776	1/1:18,0:18:2.31:13,2,0	0/1:13,0:12:99:152,0,334	0/1:10,0:10:13:13,0,208	1/1:9,0:8:8.88:135,9,0
chr10	64592004	.	AGT	A	330.32	PASS	AB=0.989;AC=21;AF=0.375;AN=56;BaseQRankSum=4.291;DP=586;FS=14.935;HRun=0;HaplotypeScore=153.5041;InbreedingCoeff=-0.3458;MQ=35.86;MQ0=37;MQRankSum=-1.275;QD=0.91;ReadPosRankSum=-0.343;VQSLOD=1.7387;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:29:2.08:2,0,65	0/1:10,0:9:18.39:19,0,18	0/0:40,0:1:3:0,3,26	0/0:52,0:2:5.03:0,5,32	0/1:18,0:16:9.44:21,0,9	0/1:14,0:14:3.11:19,0,3	0/1:15,0:15:12.79:25,0,13	0/0:36,0:35:28.46:0,28,215	0/1:20,0:20:5.98:6,0,7	0/1:24,1:23:99:100,0,223	1/1:14,0:13:0.75:2,1,0	0/1:20,0:20:20.44:20,0,29	0/0:17,0:17:3.62:0,4,384	0/1:23,1:24:25.81:26,0,26	0/1:15,1:15:2.63:26,0,3	0/1:28,0:28:11.15:48,0,11	0/1:13,0:13:23.68:24,0,55	0/1:14,0:14:10.44:10,0,80	0/1:12,1:12:20.84:21,0,104	0/0:12,0:12:15.69:0,16,64	0/0:23,0:21:0.82:0,1,2	0/0:18,0:18:0.96:0,1,23	0/0:25,0:22:39.10:0,39,583	0/1:41,0:41:47.17:47,0,899	0/1:16,0:16:2.33:2,0,17	0/1:11,0:10:1.06:1,0,37	0/1:13,0:13:15.51:16,0,37	0/1:9,0:8:2.23:32,0,2
chr10	64592006	.	TGA	T	426.23	PASS	AB=0.970;AC=10;AF=0.179;AN=56;BaseQRankSum=-0.044;DP=593;FS=18.310;HRun=0;HaplotypeScore=155.8571;InbreedingCoeff=0.2642;MQ=36.39;MQ0=37;MQRankSum=-3.239;QD=2.03;ReadPosRankSum=0.291;VQSLOD=1.6751;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:31,0:31:29.35:29,0,30	0/0:11,0:10:12.24:0,12,88	0/0:40,0:1:2.96:0,3,19	0/1:52,0:2:0.85:1,0,12	1/1:8,9:16:7.90:78,8,0	0/0:15,0:15:4.62:0,5,26	0/0:16,0:16:1.95:0,2,34	0/1:32,0:36:5.27:352,0,5	1/1:17,0:19:4.78:25,5,0	0/0:26,0:24:9.74:0,10,341	1/1:13,0:12:0.89:2,1,0	0/0:22,0:22:11.40:0,11,87	0/0:17,0:17:13.04:0,13,259	0/0:24,0:24:23.83:0,24,145	0/0:18,0:17:7.27:0,7,49	0/0:27,0:27:11.96:0,12,96	0/0:13,0:13:15:0,15,86	0/0:14,0:14:17.98:0,18,192	0/0:12,0:11:13.89:0,14,137	0/0:11,0:11:13.97:0,14,73	0/0:23,0:21:0.50:0,1,1	0/0:18,0:18:7.10:0,7,48	0/0:18,7:22:33.09:0,33,490	0/1:41,0:41:62.93:63,0,717	0/0:17,0:17:5.89:0,6,69	0/0:11,0:10:23.25:0,23,170	0/0:14,0:14:1.34:0,1,99	0/0:9,0:8:4.56:0,5,36
chr10	64592018	.	A	AGTGTGTGT	981.87	PASS	AB=1.000;AC=20;AF=0.357;AN=56;BaseQRankSum=2.826;DP=643;FS=2.112;HRun=0;HaplotypeScore=185.9835;InbreedingCoeff=-0.1920;MQ=39.84;MQ0=40;MQRankSum=-4.091;QD=2.94;ReadPosRankSum=-2.171;VQSLOD=2.4728;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:16,10:31:1.25:88,1,0	0/0:11,0:10:2.34:0,2,54	0/0:44,0:1:3.01:0,3,36	0/0:63,0:7:2.23:0,2,261	0/0:21,0:19:12.01:0,12,246	0/0:17,0:17:2.51:0,3,47	0/0:19,0:19:2.20:0,2,9	0/1:36,0:34:99:107,0,128	0/0:20,0:20:2.81:0,3,50	0/1:24,0:22:97.07:97,0,336	0/0:12,0:11:0:0,0,0	0/1:22,0:22:28.13:28,0,75	0/0:15,0:15:35.45:0,35,686	0/1:26,0:26:50.80:51,0,76	0/1:19,0:18:19.24:62,0,19	0/1:32,0:32:9.30:104,0,9	0/1:17,0:17:15.83:16,0,92	0/1:14,0:14:68.94:69,0,71	0/1:16,0:15:29.57:30,0,272	1/1:12,0:12:3.89:35,4,0	1/1:24,0:22:0.74:1,1,0	0/0:17,0:17:1.85:0,2,55	0/0:25,0:22:39.12:0,39,1003	0/0:45,0:45:99:0,100,2171	0/1:18,0:18:3.08:61,0,3	0/1:14,0:13:27.80:298,0,28	0/1:19,0:19:48.22:48,0,82	1/1:9,0:8:0.87:29,1,0
chr10	64592020	.	A	AGTGTGT	3953.73	PASS	AB=0.878;AC=34;AF=0.630;AN=54;BaseQRankSum=-0.723;DP=655;FS=3.902;HRun=0;HaplotypeScore=167.5390;InbreedingCoeff=0.4308;MQ=40.44;MQ0=39;MQRankSum=-6.547;QD=10.24;ReadPosRankSum=-1.071;VQSLOD=2.3933;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:34,0:33:9.07:197,9,0	1/1:6,5:11:8.94:112,9,0	./.	0/0:66,0:7:2.14:0,2,159	0/0:21,0:19:11.84:0,12,205	0/0:8,8:16:0.07:0,0,1	1/1:9,7:20:3.01:39,3,0	0/1:37,0:36:24.71:95,0,25	0/0:20,0:20:2.80:0,3,62	1/1:18,5:20:9.25:612,9,0	0/1:11,1:11:0:0,0,0	1/1:11,7:22:5.28:151,5,0	0/0:14,0:14:21.07:0,21,409	1/1:16,11:29:10.17:252,10,0	1/1:9,10:19:6.02:147,6,0	1/1:18,13:35:11.99:335,12,0	1/1:9,7:17:4.57:99,5,0	1/1:9,4:14:13.29:322,13,0	0/1:14,0:14:16.68:190,0,17	1/1:5,6:12:6.02:152,6,0	1/1:15,6:21:0.47:2,0,0	0/0:4,0:17:1.50:0,2,19	0/0:26,0:23:33.11:0,33,672	0/0:44,0:44:72.21:0,72,1332	1/1:10,8:18:8.53:226,9,0	1/1:6,6:13:24.08:695,24,0	0/1:6,13:20:7.16:230,0,7	1/1:7,1:8:3.01:98,3,0
chr10	64592404	.	GA	G	641.71	PASS	AB=0.886;AC=5;AF=0.089;AN=56;BaseQRankSum=1.568;DP=600;FS=0.000;HRun=12;HaplotypeScore=74.5587;InbreedingCoeff=0.2794;MQ=61.78;MQ0=14;MQRankSum=1.284;QD=6.68;ReadPosRankSum=1.489;VQSLOD=2.2890;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,41:49:93.69:708,94,0	0/0:10,1:11:9.66:0,10,265	0/0:16,0:11:23.23:0,23,180	0/1:13,1:13:10.91:11,0,130	0/0:27,0:29:23.74:0,24,543	0/0:19,0:18:22.05:0,22,397	0/0:13,1:13:6.82:0,7,249	0/0:15,0:42:90.12:0,90,491	0/0:10,0:15:38.12:0,38,225	0/0:25,1:27:45.57:0,46,595	0/0:21,1:22:20.91:0,21,365	0/0:11,1:12:0.82:0,1,190	0/1:11,3:13:33.67:34,0,228	0/0:12,1:13:6.70:0,7,227	0/0:14,0:13:27.05:0,27,274	0/0:16,1:19:14.95:0,15,276	0/0:44,0:43:77.06:0,77,927	0/0:31,1:29:42.86:0,43,668	0/0:23,0:24:59.57:0,60,552	0/0:12,1:14:15.68:0,16,326	0/0:11,0:13:29.72:0,30,267	0/0:18,0:18:33.98:0,34,317	0/0:14,1:16:15.90:0,16,308	0/0:18,0:18:40.28:0,40,388	0/0:23,0:21:44.93:0,45,410	0/0:27,1:28:45.79:0,46,631	0/0:17,0:17:45.06:0,45,446	0/1:16,2:16:4.59:5,0,297
chr10	64592720	.	A	AAAAC	26372.31	PASS	AB=0.623;AC=39;AF=0.696;AN=56;BaseQRankSum=-15.134;DP=858;FS=2.573;HRun=0;HaplotypeScore=115.9613;InbreedingCoeff=0.9170;MQ=73.51;MQ0=8;MQRankSum=-0.938;QD=43.45;ReadPosRankSum=2.064;VQSLOD=5.1018;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,41:54:92.35:2433,92,0	1/1:8,12:21:33.11:792,33,0	0/0:31,0:28:18.06:0,18,274	0/0:29,0:25:23.58:0,24,315	0/0:45,0:44:87.30:0,87,1390	1/1:7,16:22:39.13:940,39,0	1/1:15,20:36:60.21:1446,60,0	0/0:35,0:35:27.08:0,27,427	0/0:27,0:28:63.19:0,63,971	1/1:9,34:44:99:2488,105,0	1/1:2,16:18:42.14:999,42,0	1/1:9,12:22:33.11:775,33,0	0/0:26,0:26:66.22:0,66,1041	1/1:4,10:14:27.09:651,27,0	1/1:8,26:34:78.27:1847,78,0	1/1:9,22:32:19.55:1472,20,0	1/1:7,21:29:57.19:1374,57,0	1/1:9,19:28:48.16:1144,48,0	1/1:15,10:24:42.06:827,42,0	1/1:14,17:30:45.15:1015,45,0	0/1:17,25:43:12.31:1776,0,12	1/1:15,14:28:42.14:999,42,0	0/0:18,0:18:39.13:0,39,627	0/0:39,0:38:81.25:0,81,1245	1/1:1,15:19:39.13:940,39,0	1/1:12,21:35:68.89:1510,69,0	1/1:12,21:33:57.20:1374,57,0	1/1:6,21:29:66.23:1570,66,0
chr10	64594528	.	G	GCA	5669.56	PASS	AB=0.702;AC=26;AF=0.464;AN=56;BaseQRankSum=-6.139;DP=824;FS=6.965;HRun=0;HaplotypeScore=136.5644;InbreedingCoeff=-0.2231;MQ=64.72;MQ0=29;MQRankSum=0.066;QD=9.39;ReadPosRankSum=-1.397;VQSLOD=4.0647;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:36,14:55:99:197,0,119	0/1:12,0:11:24.11:80,0,24	0/0:43,0:27:5.81:0,6,47	0/0:57,0:33:3.01:0,3,34	1/1:19,0:20:18.01:210,18,0	0/1:11,11:22:92.36:201,0,92	0/1:25,15:40:18.90:168,0,19	0/0:35,0:31:35.88:0,36,375	1/1:34,0:30:9.49:92,9,0	1/1:15,4:20:9.77:232,10,0	0/1:8,9:17:82.38:119,0,82	0/1:12,15:27:76.87:204,0,77	0/0:21,0:24:35.77:0,36,364	0/1:17,12:35:99:197,0,157	0/1:18,20:42:99:552,0,134	0/1:12,17:32:16.12:632,0,16	0/1:17,17:34:99:372,0,106	0/1:15,6:21:99:318,0,108	0/0:10,0:11:2.84:0,3,14	0/1:9,4:14:18.89:135,0,19	0/1:43,34:79:47.09:501,0,47	0/1:15,14:30:92.61:414,0,93	0/0:10,0:11:11.87:0,12,115	0/0:37,0:37:53.79:0,54,552	0/1:10,11:22:99:158,0,110	1/1:7,10:17:8.47:532,8,0	1/1:8,11:19:21.70:315,22,0	0/1:1,2:4:8.13:40,0,8
chr10	64594565	.	TCA	T	905.07	PASS	AB=0.819;AC=6;AF=0.107;AN=56;BaseQRankSum=3.835;DP=901;FS=13.050;HRun=0;HaplotypeScore=149.9744;InbreedingCoeff=0.7229;MQ=53.32;MQ0=38;MQRankSum=-1.693;QD=7.42;ReadPosRankSum=-3.357;VQSLOD=1.7393;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,1:40:35.28:0,35,1033	0/0:12,0:11:23.87:0,24,356	0/0:34,1:7:12.01:0,12,160	0/0:52,0:12:19.54:0,20,230	0/1:14,11:24:1.05:164,0,1	0/0:21,0:21:34.36:0,34,532	0/0:40,0:39:77.59:0,78,1226	1/1:20,15:30:39:435,39,0	1/1:17,22:35:32.76:435,33,0	0/0:33,0:31:58.47:0,58,1219	0/0:22,0:21:48.07:0,48,699	0/0:28,0:28:11.34:0,11,670	0/0:22,0:22:33.11:0,33,538	0/0:31,0:31:57.19:0,57,875	0/0:48,1:49:62.40:0,62,1466	0/0:45,0:44:99:0,102,1619	0/0:37,2:38:7.50:0,8,1116	0/0:30,0:29:72.67:0,73,1143	0/0:16,0:14:33.08:0,33,509	0/0:15,0:15:24.07:0,24,388	0/0:89,0:85:99:0,144,2185	0/0:30,1:31:69.83:0,70,1146	0/0:11,0:11:24.08:0,24,389	0/0:42,0:40:92.96:0,93,1417	0/0:24,0:24:6.25:0,6,472	0/0:39,0:37:90.19:0,90,1324	0/1:20,1:21:0.33:0,0,498	0/0:11,0:11:20.17:0,20,385
chr10	64595084	.	A	AAACAAACAAAC	4326.46	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=0.708;DP=603;FS=4.979;HRun=0;HaplotypeScore=187.8568;InbreedingCoeff=0.8348;MQ=61.19;MQ0=1;MQRankSum=-6.810;QD=54.77;ReadPosRankSum=-6.379;VQSLOD=2.9113;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,118,3567	0/0:7,0:7:3.01:0,3,98	0/0:27,0:19:26.91:0,27,347	0/0:16,0:11:4.21:0,4,357	1/1:10,7:19:36.12:1529,36,0	0/0:16,0:16:45.11:0,45,1316	0/0:16,0:16:9.79:0,10,763	1/1:38,0:33:6.53:1399,7,0	1/1:8,11:21:27.09:1399,27,0	0/0:23,0:22:51.18:0,51,1564	0/0:15,0:15:30.10:0,30,872	0/0:14,0:14:30.10:0,30,967	0/0:15,0:15:33.11:0,33,967	0/0:23,0:23:57.19:0,57,1783	0/0:20,0:20:54.17:0,54,1495	0/0:21,0:21:36.12:0,36,1113	0/0:31,0:31:54.65:0,55,1532	0/0:33,0:33:71.96:0,72,2096	0/0:23,0:23:36.12:0,36,1103	0/0:13,0:13:24.08:0,24,678	0/0:41,0:41:81.28:0,81,2451	0/0:9,0:9:15.05:0,15,487	0/0:18,0:18:38.85:0,39,1042	0/0:31,0:31:72.25:0,72,2326	0/0:14,0:14:24.07:0,24,655	0/0:16,0:16:42.14:0,42,1161	0/0:25,0:25:48.16:0,48,1416	0/0:5,0:5:15.05:0,15,489
chr10	64595792	.	A	AG	431.32	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=1.672;DP=350;FS=0.726;HRun=0;HaplotypeScore=59.1407;InbreedingCoeff=0.7537;MQ=71.42;MQ0=4;MQRankSum=2.123;QD=9.80;ReadPosRankSum=0.374;VQSLOD=3.5518;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:29.54:0,30,184	0/0:7,0:7:14.83:0,15,111	0/0:13,0:9:5.94:0,6,126	0/0:18,0:12:8.59:0,9,149	1/1:10,1:10:17.06:112,17,0	0/0:15,0:15:16.52:0,17,95	0/0:21,0:21:41.22:0,41,288	1/1:18,3:21:43.25:365,43,0	1/1:12,0:12:17.48:93,17,0	0/0:13,0:13:27.73:0,28,193	0/0:16,0:15:19.83:0,20,150	0/0:8,0:6:14.22:0,14,111	0/0:10,0:10:24.01:0,24,269	0/0:6,0:6:3.88:0,4,27	0/0:5,0:5:9.44:0,9,72	0/0:7,0:7:19.19:0,19,132	0/0:14,0:13:20.07:0,20,122	0/0:11,0:11:11.84:0,12,82	0/0:11,0:11:22.45:0,22,155	0/0:14,0:14:14.89:0,15,114	0/0:15,0:14:20.90:0,21,168	0/0:3,0:2:3:0,3,27	0/0:5,0:5:8.89:0,9,62	0/0:19,0:19:42.04:0,42,486	0/0:8,0:8:14.65:0,15,109	0/0:17,0:17:28.91:0,29,192	0/0:12,0:12:17.75:0,18,133	0/0:17,0:17:8.67:0,9,61
chr10	64596140	.	CA	C	1180.10	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.311;DP=529;FS=13.224;HRun=3;HaplotypeScore=51.2372;InbreedingCoeff=0.9920;MQ=84.84;MQ0=0;MQRankSum=-1.358;QD=30.26;ReadPosRankSum=-1.861;VQSLOD=1.5453;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:48.14:0,48,671	0/0:11,0:11:33.10:0,33,459	0/0:20,0:20:55.43:0,55,766	0/0:16,0:16:38.86:0,39,531	1/1:0,18:18:45.14:558,45,0	0/0:19,0:19:54.15:0,54,755	0/0:8,0:8:21.06:0,21,286	1/1:1,20:21:60.19:744,60,0	0/0:17,0:17:51.16:0,51,716	0/0:19,0:19:57.19:0,57,821	0/0:22,0:22:66.22:0,66,949	0/0:9,0:9:27.09:0,27,389	0/0:14,0:14:42.14:0,42,597	0/0:21,0:21:63.21:0,63,907	0/0:18,0:18:54.16:0,54,757	0/0:18,0:18:51.17:0,51,735	0/0:18,0:18:54.18:0,54,775	0/0:21,0:21:63.21:0,63,904	0/0:23,0:23:63.19:0,63,887	0/0:29,0:29:75.24:0,75,1063	0/0:9,0:9:24.08:0,24,346	0/0:19,0:18:54.18:0,54,776	0/0:20,0:20:60.19:0,60,845	0/0:7,0:7:18.06:0,18,259	0/0:23,0:22:66.22:0,66,950	0/0:39,0:39:99:0,117,1685	0/0:26,0:26:75.25:0,75,1080	0/0:27,0:26:72.24:0,72,1036
chr10	64596450	.	CAGAGAGAGCGAGAGAGAGAG	C	7212.23	PASS	AB=0.990;AC=41;AF=0.732;AN=56;BaseQRankSum=1.379;DP=488;FS=1.750;HRun=0;HaplotypeScore=198.1432;InbreedingCoeff=0.4781;MQ=59.62;MQ0=17;MQRankSum=-4.318;QD=22.47;ReadPosRankSum=1.817;VQSLOD=3.9208;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:26:99:191,0,694	1/1:1,7:8:9.03:392,9,0	0/0:52,0:25:16.57:0,17,198	0/0:63,0:20:23.84:0,24,214	0/1:9,0:9:0:0,0,0	1/1:9,1:10:17.98:317,18,0	1/1:5,0:5:8.99:76,9,0	0/1:12,0:12:99:171,0,269	0/1:10,0:9:59.83:60,0,142	1/1:9,0:10:23.92:312,24,0	1/1:3,10:13:11.78:85,12,0	1/1:4,18:22:17.93:691,18,0	0/0:13,0:13:35.92:0,36,1217	1/1:9,0:9:17.99:163,18,0	1/1:2,18:22:18.06:929,18,0	1/1:1,13:14:3.01:165,3,0	1/1:26,3:28:65.58:882,66,0	1/1:4,16:20:18.03:810,18,0	1/1:2,9:10:26.96:369,27,0	1/1:1,12:12:5.88:36,6,0	1/1:16,0:16:5.32:96,5,0	1/1:1,6:7:2.94:18,3,0	0/0:11,0:10:23.97:0,24,1207	0/0:28,0:28:66.13:0,66,4039	1/1:10,0:10:9.91:113,10,0	1/1:2,9:11:23.83:582,24,0	1/1:2,10:12:6.02:309,6,0	0/1:18,0:18:36.60:445,0,37
chr10	64596457	.	AGC	A	3188.49	PASS	AB=0.500;AC=45;AF=0.804;AN=56;BaseQRankSum=2.172;DP=443;FS=1.887;HRun=0;HaplotypeScore=90.9066;InbreedingCoeff=0.7645;MQ=57.98;MQ0=19;MQRankSum=-5.593;QD=10.77;ReadPosRankSum=0.987;VQSLOD=2.9304;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:25:56.87:477,57,0	1/1:8,0:8:5.91:39,6,0	0/0:38,0:16:17.43:0,17,198	0/0:56,0:17:14.45:0,14,148	0/1:0,9:9:0:0,0,0	1/1:10,0:9:20.82:154,21,0	1/1:3,0:3:8.99:76,9,0	1/1:12,0:11:32.96:289,33,0	1/1:9,0:8:14.98:125,15,0	1/1:9,0:9:23.87:187,24,0	1/1:12,0:11:11.65:66,12,0	1/1:18,0:18:17.72:113,18,0	0/0:13,0:12:35.15:0,35,286	1/1:8,0:8:17.92:143,18,0	1/1:21,0:21:17.72:114,18,0	1/1:13,0:13:2.97:20,3,0	1/1:27,0:26:65.43:477,65,0	1/1:17,0:17:17.82:120,18,0	1/1:10,0:9:26.81:204,27,0	1/1:13,0:12:5.88:36,6,0	1/1:14,0:14:5.30:69,5,0	1/1:7,0:7:2.94:18,3,0	0/0:11,0:10:23.92:0,24,265	0/0:28,0:28:23.86:0,24,585	1/1:8,0:8:9.91:113,10,0	1/1:11,0:11:11.92:87,12,0	1/1:11,0:11:5.92:39,6,0	1/1:19,0:18:53.58:396,54,0
chr10	64596886	.	T	TTTTG	4747.77	PASS	AB=1.000;AC=41;AF=0.732;AN=56;BaseQRankSum=-5.680;DP=505;FS=62.866;HRun=0;HaplotypeScore=125.0470;InbreedingCoeff=0.3341;MQ=61.17;MQ0=20;MQRankSum=1.430;QD=11.33;ReadPosRankSum=3.374;VQSLOD=2.1155;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:29:28.73:44,0,29	1/1:1,5:6:12.29:119,12,0	0/1:44,0:11:2.52:3,0,46	0/0:45,0:19:3.34:0,3,85	1/1:12,0:11:26.08:151,26,0	1/1:17,0:16:34:315,34,0	0/1:14,0:12:33.45:115,0,33	1/1:10,0:7:17.87:141,18,0	1/1:14,0:13:32.46:214,32,0	1/1:18,0:17:11.26:303,11,0	1/1:23,0:22:31.71:371,32,0	1/1:12,0:12:22.28:193,22,0	0/0:12,0:12:24.18:0,24,171	1/1:13,0:12:20.79:158,21,0	1/1:15,0:14:10.45:123,10,0	1/1:14,0:14:25.32:308,25,0	1/1:20,0:17:23.75:171,24,0	0/1:13,0:12:23.02:79,0,23	0/1:20,0:20:21.54:179,0,22	1/1:18,0:18:30.08:362,30,0	1/1:7,0:6:5.79:54,6,0	1/1:14,0:14:21.50:177,21,0	0/0:15,0:15:27.66:0,28,238	0/0:14,0:14:14.20:0,14,149	0/1:25,0:24:24.33:305,0,24	1/1:25,0:25:30.44:382,30,0	1/1:22,0:22:36.08:403,36,0	0/1:13,0:11:32.70:79,0,33
chr10	64596888	.	T	TTG	5208.27	PASS	AB=0.975;AC=41;AF=0.732;AN=56;BaseQRankSum=-5.031;DP=498;FS=78.246;HRun=0;HaplotypeScore=87.8288;InbreedingCoeff=0.3464;MQ=59.53;MQ0=21;MQRankSum=3.271;QD=12.52;ReadPosRankSum=4.522;VQSLOD=1.4267;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:29,2:30:21.18:129,0,21	1/1:5,1:6:11.38:106,11,0	0/1:43,0:10:2.77:3,0,43	0/0:44,0:18:6.55:0,7,93	1/1:12,0:11:26.08:151,26,0	1/1:18,0:17:25.99:305,26,0	0/1:15,0:13:9.68:120,0,10	1/1:10,0:7:17.87:141,18,0	1/1:13,0:12:32.50:214,32,0	0/1:18,0:17:4.95:321,0,5	1/1:22,0:21:28.80:391,29,0	1/1:12,0:12:12.80:182,13,0	0/0:12,0:11:31.06:0,31,243	1/1:13,0:12:19.85:151,20,0	1/1:15,0:14:11.95:170,12,0	1/1:14,0:14:25.34:336,25,0	1/1:18,2:17:23.25:256,23,0	0/1:13,0:12:12.72:81,0,13	1/1:21,0:21:4.49:243,4,0	1/1:19,0:19:32.51:364,33,0	1/1:5,1:5:5.23:73,5,0	0/1:14,0:14:35.58:167,0,36	0/0:13,0:13:32.30:0,32,257	0/0:13,0:13:16.76:0,17,166	0/1:20,3:22:11.35:408,0,11	1/1:24,0:24:6.76:337,7,0	1/1:22,0:22:24.78:411,25,0	1/1:11,1:10:9.91:150,10,0
chr10	64596889	.	T	TG	4386.85	PASS	AB=0.927;AC=39;AF=0.696;AN=56;BaseQRankSum=-4.861;DP=500;FS=111.113;HRun=0;HaplotypeScore=78.1316;InbreedingCoeff=0.2198;MQ=57.90;MQ0=21;MQRankSum=3.715;QD=10.47;ReadPosRankSum=5.402;VQSLOD=1.7664;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:19,12:31:9.71:151,0,10	1/1:6,0:6:11.73:73,12,0	0/1:42,0:9:2.64:3,0,40	0/0:43,0:17:6.80:0,7,92	1/1:12,0:11:26.08:151,26,0	1/1:18,2:19:17.73:267,18,0	0/1:14,0:12:4.52:125,0,5	1/1:9,0:6:17.92:141,18,0	1/1:13,0:12:32.50:214,32,0	1/1:17,1:17:8.35:330,8,0	1/1:22,0:21:7.46:288,7,0	1/1:11,1:12:7.21:168,7,0	0/0:12,0:11:32.26:0,32,243	0/1:15,0:13:11.54:130,0,12	1/1:13,1:13:17.57:134,18,0	1/1:11,3:14:25.03:225,25,0	1/1:20,1:17:7.32:134,7,0	0/1:12,1:12:54.15:55,0,54	0/1:20,1:21:15.45:229,0,15	1/1:20,0:20:16.19:321,16,0	1/1:6,0:5:4.91:53,5,0	0/1:13,1:14:22.86:158,0,23	0/0:13,0:13:33.02:0,33,272	0/0:13,0:13:20.19:0,20,183	0/1:22,1:22:16.59:306,0,17	0/1:20,4:24:32.29:308,0,32	1/1:22,0:22:10.82:315,11,0	1/1:11,1:10:11.43:110,11,0
chr10	64596978	.	TGAGCTAAATCCCCAGCCCC	T	41.67	PASS	AB=0.667;AC=1;AF=0.019;AN=52;BaseQRankSum=2.946;DP=488;FS=5.533;HRun=0;HaplotypeScore=202.5888;InbreedingCoeff=-0.0347;MQ=47.41;MQ0=50;MQRankSum=1.528;QD=5.21;ReadPosRankSum=-2.573;VQSLOD=1.9061;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:32:78.27:0,78,7168	0/0:5,0:5:12.04:0,12,1127	0/0:7,0:1:3.01:0,3,256	0/0:6,0:2:2.98:0,3,272	./.	0/0:24,0:22:54.19:0,54,5049	0/0:30,0:25:69.24:0,69,5950	0/1:4,4:5:99:116,0,265	./.	0/0:15,0:14:39.13:0,39,3378	0/0:17,0:16:36.12:0,36,3221	0/0:15,0:15:42.14:0,42,3779	0/0:17,0:14:42.14:0,42,3911	0/0:18,0:17:36.12:0,36,3218	0/0:15,0:13:33.11:0,33,3074	0/0:18,0:17:41.68:0,42,3894	0/0:29,0:24:60.21:0,60,5611	0/0:22,0:18:54.19:0,54,4616	0/0:20,0:13:39.10:0,39,2753	0/0:19,0:17:42.14:0,42,3327	0/0:25,0:20:51.18:0,51,4288	0/0:12,0:11:18.06:0,18,1502	0/0:19,0:18:42.14:0,42,3915	0/0:29,0:25:69.24:0,69,6387	0/0:18,0:17:45.15:0,45,4160	0/0:22,0:18:51.17:0,51,4492	0/0:28,0:27:66.21:0,66,5917	0/0:11,0:9:27.09:0,27,2426
chr10	64597348	.	T	TAC	1738.10	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-5.770;DP=546;FS=0.000;HRun=0;HaplotypeScore=76.2947;InbreedingCoeff=0.9959;MQ=69.13;MQ0=0;MQRankSum=-1.653;QD=29.97;ReadPosRankSum=-0.092;VQSLOD=5.0032;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,108,1346	0/0:7,0:7:18.06:0,18,227	0/0:23,0:20:26.94:0,27,329	0/0:24,0:23:39.13:0,39,600	1/1:2,20:22:42.14:695,42,0	0/0:18,0:18:48.15:0,48,606	0/0:21,0:21:33.10:0,33,416	1/1:7,15:23:45.10:692,45,0	1/1:5,8:13:30.10:494,30,0	0/0:17,0:17:48.15:0,48,605	0/0:17,0:17:29.72:0,30,378	0/0:16,0:16:42.13:0,42,530	0/0:13,0:13:36.06:0,36,423	0/0:19,0:19:51.16:0,51,643	0/0:23,0:24:66.04:0,66,809	0/0:21,0:21:39.12:0,39,492	0/0:26,0:27:65.96:0,66,762	0/0:14,0:14:36.11:0,36,454	0/0:17,0:17:33.07:0,33,388	0/0:23,0:23:60.19:0,60,756	0/0:23,0:23:63.20:0,63,793	0/0:16,0:16:45.12:0,45,541	0/0:18,0:18:51.16:0,51,643	0/0:17,0:17:48.14:0,48,591	0/0:15,0:15:39.12:0,39,491	0/0:15,0:15:33.11:0,33,416	0/0:21,0:21:57.18:0,57,719	0/0:14,0:14:39.08:0,39,462
chr10	64597404	.	GA	G	483.76	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=7.159;DP=439;FS=0.869;HRun=1;HaplotypeScore=51.2596;InbreedingCoeff=0.9579;MQ=56.99;MQ0=0;MQRankSum=-4.557;QD=21.99;ReadPosRankSum=-1.850;VQSLOD=3.1485;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,1:35:60.53:0,61,1447	0/0:5,0:5:12.04:0,12,187	0/0:10,0:6:18.04:0,18,261	0/0:13,0:12:26.19:0,26,504	1/1:1,8:9:21.07:271,21,0	0/0:23,0:23:69.24:0,69,1100	0/0:12,0:12:33.11:0,33,522	1/1:3,7:8:20.98:232,21,0	1/1:0,3:3:9.03:116,9,0	0/0:19,0:19:57.19:0,57,883	0/0:6,0:6:18.06:0,18,284	0/0:9,0:9:27.09:0,27,431	0/0:11,0:11:33.11:0,33,516	0/0:14,0:14:39.13:0,39,623	0/0:18,0:18:48.16:0,48,767	0/0:29,0:29:84.27:0,84,1311	0/0:28,0:28:78.27:0,78,1238	0/0:17,0:17:48.14:0,48,741	0/0:22,0:21:60.20:0,60,937	0/0:13,0:13:39.13:0,39,611	0/0:24,1:25:33.53:0,34,1017	0/0:18,0:18:51.17:0,51,815	0/0:13,0:13:39.13:0,39,619	0/0:24,0:24:69.24:0,69,1099	0/0:12,0:12:33.11:0,33,525	0/0:12,0:12:36.12:0,36,571	0/0:18,0:18:54.17:0,54,834	0/0:10,0:10:30.10:0,30,479
chr10	64597498	.	AG	A	3840.77	PASS	AB=1.000;AC=44;AF=0.815;AN=54;BaseQRankSum=0.129;DP=332;FS=8.454;HRun=1;HaplotypeScore=43.2262;InbreedingCoeff=0.7156;MQ=54.79;MQ0=29;MQRankSum=-2.504;QD=14.17;ReadPosRankSum=-1.081;VQSLOD=1.8007;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:21:51.37:296,51,0	1/1:7,0:7:3.09:115,3,0	0/1:16,0:4:7.76:8,0,9	0/0:21,0:8:7.93:0,8,86	1/1:1,0:1:2.88:15,3,0	1/1:13,1:12:25.30:158,25,0	1/1:7,0:5:10.21:75,10,0	0/1:5,0:3:0:0,0,0	./.	1/1:15,0:14:37.32:278,37,0	1/1:12,0:12:28.01:214,28,0	1/1:10,0:9:14.42:96,14,0	0/0:7,0:7:11.68:0,12,118	1/1:8,1:6:11.06:71,11,0	1/1:9,0:9:20.85:156,21,0	1/1:7,1:7:16.27:132,16,0	1/1:26,1:27:57.10:382,57,0	1/1:12,0:11:23.10:153,23,0	1/1:20,0:17:47.45:323,47,0	1/1:8,0:8:20.34:158,20,0	1/1:4,0:4:9.08:49,9,0	1/1:5,0:4:8.36:58,8,0	0/0:7,0:7:17.97:0,18,156	0/0:25,0:24:54.66:0,55,481	1/1:19,0:18:46.24:344,46,0	1/1:17,0:17:45.15:336,45,0	1/1:14,1:15:41.25:308,41,0	1/1:8,0:8:17.43:117,17,0
chr10	64597606	.	AGAAACAAACAAAC	A	489.64	PASS	AB=0.923;AC=3;AF=0.054;AN=56;BaseQRankSum=5.738;DP=397;FS=2.120;HRun=0;HaplotypeScore=141.8431;InbreedingCoeff=0.4800;MQ=51.19;MQ0=16;MQRankSum=-0.847;QD=16.32;ReadPosRankSum=-3.659;VQSLOD=1.4964;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:26:63.03:0,63,2214	0/0:6,0:6:18.06:0,18,790	0/0:12,0:5:14.64:0,15,462	0/0:10,0:4:12.01:0,12,363	0/1:11,0:12:18.28:18,0,193	0/0:23,0:23:54.19:0,54,2785	0/0:10,0:9:18.06:0,18,844	1/1:1,15:17:45.05:576,45,0	0/0:9,0:8:3.84:0,4,27	0/0:14,0:12:36.12:0,36,1698	0/0:7,0:7:18.06:0,18,1019	0/0:11,0:11:18.04:0,18,714	0/0:10,0:10:27.09:0,27,1368	0/0:8,0:8:18.06:0,18,606	0/0:6,0:6:15.05:0,15,782	0/0:18,0:16:39.12:0,39,1849	0/0:38,0:36:81.23:0,81,3682	0/0:20,0:19:54.07:0,54,2251	0/0:11,0:10:30.10:0,30,1420	0/0:18,0:18:53.94:0,54,2100	0/0:1,0:1:3.01:0,3,144	0/0:8,0:8:24.08:0,24,1236	0/0:11,0:10:27.09:0,27,1116	0/0:23,0:21:57.15:0,57,3020	0/0:22,0:21:53.85:0,54,2453	0/0:20,0:19:57.19:0,57,2227	0/0:8,0:7:12.04:0,12,662	0/0:15,0:15:36.12:0,36,1627
chr10	64597610	.	ACAAACAAAC	A	780.47	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=6.225;DP=405;FS=1.672;HRun=0;HaplotypeScore=117.7877;InbreedingCoeff=0.7722;MQ=51.51;MQ0=14;MQRankSum=-2.523;QD=17.34;ReadPosRankSum=-5.021;VQSLOD=0.0651;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:25:37.35:0,37,1451	0/0:6,0:6:18.06:0,18,562	0/0:12,0:5:14.84:0,15,385	0/0:11,0:4:12.04:0,12,309	1/1:16,0:18:3.74:285,4,0	0/0:24,0:23:54.18:0,54,2033	0/0:10,0:9:18.06:0,18,640	1/1:18,0:17:45:557,45,0	1/1:0,9:8:3.01:60,3,0	0/0:12,0:12:36.08:0,36,1264	0/0:8,0:8:20.43:0,20,759	0/0:11,0:11:17.09:0,17,510	0/0:12,0:12:33.11:0,33,1198	0/0:11,0:10:17.94:0,18,428	0/0:7,0:7:18.06:0,18,635	0/0:17,0:15:36.12:0,36,1297	0/0:38,0:36:81.17:0,81,2623	0/0:19,0:18:48.15:0,48,1595	0/0:12,0:11:32.34:0,32,1074	0/0:15,0:15:45.07:0,45,1495	0/0:2,0:2:3.01:0,3,119	0/0:8,0:8:24.08:0,24,910	0/0:11,0:10:26.81:0,27,827	0/0:22,0:20:54.17:0,54,2247	0/0:23,0:22:53.84:0,54,1869	0/0:20,0:19:57.07:0,57,1551	0/0:8,0:7:12.04:0,12,476	0/0:15,0:15:36.08:0,36,1191
chr10	64597619	.	C	CAA	6286.73	PASS	AB=0.800;AC=42;AF=0.778;AN=54;BaseQRankSum=-4.284;DP=391;FS=11.377;HRun=10;HaplotypeScore=56.1550;InbreedingCoeff=0.7082;MQ=54.48;MQ0=11;MQRankSum=-1.198;QD=19.77;ReadPosRankSum=-0.483;VQSLOD=2.2067;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:22:3.65:188,0,4	1/1:1,4:5:12:154,12,0	0/0:11,0:6:15.80:0,16,120	0/0:9,0:4:8.70:0,9,55	1/1:20,0:20:3.85:137,4,0	1/1:5,19:23:36.12:537,36,0	1/1:0,7:9:14.02:152,14,0	1/1:18,0:17:16.68:117,17,0	./.	1/1:3,10:14:27.09:397,27,0	1/1:2,8:12:26.53:333,27,0	1/1:4,8:13:8.52:95,9,0	0/0:12,0:12:24:0,24,244	1/1:2,6:7:3.01:45,3,0	1/1:1,7:8:12.04:179,12,0	1/1:3,13:16:26.58:366,27,0	1/1:7,24:33:44.12:582,44,0	1/1:7,9:15:36.10:515,36,0	0/1:4,6:11:1.65:267,0,2	1/1:2,12:16:36.10:494,36,0	1/1:1,2:3:3.01:45,3,0	1/1:3,6:9:18.06:265,18,0	0/0:8,0:8:20.78:0,21,195	0/0:18,0:18:44.84:0,45,439	1/1:5,16:20:36.12:536,36,0	1/1:2,10:14:35.52:417,36,0	1/1:1,6:7:11.53:143,12,0	1/1:2,10:13:23.57:322,24,0
chr10	64597738	.	GC	G	1524.05	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=5.319;DP=520;FS=0.605;HRun=5;HaplotypeScore=56.8902;InbreedingCoeff=0.9947;MQ=83.25;MQ0=0;MQRankSum=1.188;QD=25.83;ReadPosRankSum=-1.480;VQSLOD=2.3172;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,105,1396	0/0:8,0:8:24.07:0,24,313	0/0:19,0:19:51.11:0,51,637	0/0:18,0:18:45.15:0,45,585	1/1:2,9:11:27.08:306,27,0	0/0:21,0:21:63.17:0,63,840	0/0:16,0:16:48.15:0,48,640	1/1:4,27:31:75.21:850,75,0	1/1:1,16:17:45.13:510,45,0	0/0:18,0:18:54.15:0,54,707	0/0:16,0:16:48.16:0,48,655	0/0:18,0:18:48.15:0,48,641	0/0:20,0:20:54.18:0,54,737	0/0:23,0:23:66.20:0,66,866	0/0:18,0:18:51.17:0,51,695	0/0:20,0:20:57.19:0,57,779	0/0:35,0:35:99:0,105,1432	0/0:8,0:8:18.06:0,18,246	0/0:14,0:14:39.13:0,39,533	0/0:14,0:14:42.13:0,42,555	0/0:24,0:24:63.20:0,63,846	0/0:8,0:8:24.07:0,24,313	0/0:10,0:10:27.09:0,27,367	0/0:23,0:23:69.23:0,69,943	0/0:19,0:19:57.10:0,57,736	0/0:22,0:22:57.19:0,57,768	0/0:12,0:12:30.09:0,30,395	0/0:19,0:19:51.17:0,51,697
chr10	64601715	.	TCTTC	T	8123.35	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=4.369;DP=454;FS=4.845;HRun=0;HaplotypeScore=134.7124;InbreedingCoeff=0.9581;MQ=54.54;MQ0=7;MQRankSum=-3.098;QD=21.55;ReadPosRankSum=1.717;VQSLOD=4.6634;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:14:33.58:236,34,0	1/1:10,1:11:32.19:281,32,0	0/0:13,0:7:8.70:0,9,65	0/0:12,0:7:14.98:0,15,140	1/1:9,0:9:11.74:83,12,0	1/1:11,2:13:36.77:320,37,0	1/1:20,0:20:47.91:406,48,0	1/1:3,0:24:56.67:436,57,0	1/1:7,0:7:20.05:141,20,0	1/1:21,6:27:77.85:753,78,0	1/1:11,2:13:35.37:294,35,0	1/1:12,6:18:44.91:405,45,0	0/0:13,0:13:36.08:0,36,592	1/1:7,6:13:35.89:365,36,0	1/1:15,2:17:44.32:336,44,0	1/1:16,1:17:35.68:287,36,0	1/1:25,1:26:50.46:474,50,0	1/1:16,0:16:22.25:285,22,0	1/1:14,1:15:32.69:292,33,0	1/1:11,2:13:35.42:285,35,0	1/1:6,0:5:8.99:74,9,0	1/1:21,1:22:50.78:406,51,0	0/0:14,0:13:32.42:0,32,442	0/0:25,0:23:31.02:0,31,253	1/1:12,0:12:32.94:277,33,0	1/1:20,6:26:69.02:734,69,0	1/1:19,6:24:65.60:630,66,0	1/1:9,4:12:35.99:324,36,0
chr10	64601723	.	C	CCTTT	1060.18	PASS	AB=1.000;AC=25;AF=0.543;AN=46;BaseQRankSum=-8.092;DP=443;FS=0.745;HRun=0;HaplotypeScore=164.3579;InbreedingCoeff=-0.1372;MQ=51.88;MQ0=7;MQRankSum=1.937;QD=3.23;ReadPosRankSum=-6.776;VQSLOD=-0.2279;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:12,0:13:5.67:28,6,0	0/1:12,0:12:16.16:34,0,16	./.	./.	0/0:11,0:10:5.19:0,5,19	0/1:14,0:14:11.20:11,0,13	./.	1/1:28,0:28:12.10:49,12,0	0/0:10,0:10:1.99:0,2,5	0/1:27,0:27:6.17:6,0,120	0/1:14,0:14:25.73:39,0,26	0/0:17,0:17:11.38:0,11,124	1/1:13,0:13:30.07:549,30,0	0/1:13,0:13:11.26:11,0,108	0/1:16,0:16:20.90:43,0,21	1/1:15,0:15:5.20:27,5,0	0/1:25,0:25:1.29:1,0,22	0/1:15,0:15:4.22:34,0,4	0/1:12,0:12:15.21:17,0,15	0/1:14,0:14:30.76:52,0,31	./.	0/1:22,0:22:8.83:10,0,9	1/1:11,1:11:15.01:262,15,0	./.	1/1:13,0:13:2.22:7,2,0	0/1:24,0:24:11.74:12,0,133	0/1:26,0:25:8.52:9,0,117	0/0:13,0:12:10.91:0,11,63
chr10	64601766	.	TTCTTTC	T	7700.43	PASS	AC=38;AF=0.704;AN=54;BaseQRankSum=3.319;DP=414;FS=13.507;HRun=0;HaplotypeScore=110.0437;InbreedingCoeff=0.8677;MQ=43.32;MQ0=43;MQRankSum=-2.337;QD=24.29;ReadPosRankSum=1.498;VQSLOD=3.9227;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:14:20.70:154,21,0	1/1:7,2:7:18.04:298,18,0	0/0:3,0:1:3:0,3,26	0/0:4,0:1:2.92:0,3,17	0/0:12,0:12:26.66:0,27,224	1/1:10,3:12:23.28:326,23,0	1/1:9,8:12:6.29:22,6,0	0/0:20,0:19:50.67:0,51,490	0/0:8,0:8:21.34:0,21,136	1/1:6,21:24:62.18:966,62,0	1/1:4,17:19:10.46:580,10,0	1/1:9,7:13:23.94:406,24,0	0/0:17,0:17:51.14:0,51,1049	1/1:9,6:12:30.05:537,30,0	1/1:2,11:12:21.07:388,21,0	1/1:1,16:16:6.02:137,6,0	1/1:13,16:22:14.50:179,14,0	1/1:17,1:14:20.78:567,21,0	1/1:15,3:12:36.11:564,36,0	1/1:7,3:8:24.06:437,24,0	./.	1/1:1,15:15:21:313,21,0	0/0:11,0:10:30.09:0,30,642	0/0:18,0:16:15.05:0,15,242	1/1:4,9:11:7.27:119,7,0	1/1:15,7:18:53.49:885,53,0	1/1:6,17:20:31.83:609,32,0	1/1:2,4:4:12.04:214,12,0
chr10	64601770	.	TTC	T	4234.40	PASS	AB=0.913;AC=37;AF=0.685;AN=54;BaseQRankSum=4.713;DP=416;FS=9.549;HRun=0;HaplotypeScore=99.6090;InbreedingCoeff=0.7920;MQ=43.48;MQ0=43;MQRankSum=-1.518;QD=13.40;ReadPosRankSum=2.793;VQSLOD=3.8153;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,1:16:22.97:148,23,0	1/1:8,1:7:5.96:120,6,0	0/0:4,0:2:5.98:0,6,46	0/0:5,0:1:2.92:0,3,17	0/0:12,0:12:26.53:0,27,173	1/1:14,0:13:17.28:150,17,0	1/1:13,3:11:5.04:20,5,0	0/0:21,0:20:46.87:0,47,283	0/0:9,0:9:22.18:0,22,97	1/1:24,2:23:52.26:517,52,0	0/1:19,2:19:10.96:353,0,11	1/1:12,3:12:22.08:165,22,0	0/0:16,0:16:48.14:0,48,585	1/1:14,1:12:23.53:250,24,0	1/1:13,0:12:19.22:184,19,0	1/1:16,1:16:6.01:60,6,0	1/1:24,4:21:11.86:97,12,0	1/1:9,8:13:24.40:363,24,0	1/1:18,1:13:34.53:366,35,0	1/1:11,0:9:23.20:221,23,0	./.	1/1:15,1:15:18.92:190,19,0	0/0:12,0:11:33.10:0,33,411	0/0:17,0:15:14.96:0,15,177	1/1:12,1:11:8.99:98,9,0	1/1:16,5:17:44.46:534,44,0	1/1:21,2:20:31.09:319,31,0	1/1:6,0:4:11.73:81,12,0
chr10	64601772	.	C	CTT	3961.82	PASS	AB=1.000;AC=40;AF=0.741;AN=54;BaseQRankSum=2.845;DP=425;FS=5.413;HRun=9;HaplotypeScore=102.3149;InbreedingCoeff=0.6198;MQ=45.32;MQ0=43;MQRankSum=-2.190;QD=11.29;ReadPosRankSum=1.396;VQSLOD=1.2264;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:16:35.99:180,36,0	1/1:4,4:7:16.90:169,17,0	0/0:4,0:2:5.98:0,6,47	0/0:6,0:2:2.94:0,3,18	0/0:13,0:12:26.23:0,26,159	1/1:6,7:12:16.80:146,17,0	1/1:13,2:11:5.05:20,5,0	0/0:21,0:20:16.97:0,17,93	0/0:9,0:9:9.56:0,10,29	1/1:27,1:25:39.02:370,39,0	1/1:21,0:19:2.82:336,3,0	1/1:10,5:13:10.61:96,11,0	0/1:16,0:16:83.61:84,0,195	1/1:8,6:11:18.06:152,18,0	1/1:12,1:12:15.05:208,15,0	1/1:17,0:16:6.02:80,6,0	1/1:25,2:21:12.94:70,13,0	1/1:12,4:13:27.50:378,27,0	1/1:8,12:14:35.58:453,36,0	1/1:5,7:10:20.43:277,20,0	./.	1/1:16,0:15:14.99:178,15,0	0/1:13,0:12:19.37:19,0,185	0/0:17,0:15:7.24:0,7,120	1/1:12,1:11:8.99:97,9,0	1/1:16,4:16:41.17:393,41,0	1/1:21,0:20:26:167,26,0	1/1:8,2:8:11.92:88,12,0
chr10	64601779	.	T	TG	299.86	PASS	AB=1.000;AC=4;AF=0.074;AN=54;BaseQRankSum=-1.667;DP=436;FS=0.000;HRun=0;HaplotypeScore=108.0289;InbreedingCoeff=0.3382;MQ=50.92;MQ0=43;MQRankSum=-1.517;QD=5.26;ReadPosRankSum=0.356;VQSLOD=2.9211;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:41.30:0,41,314	0/0:9,0:7:6.01:0,6,77	0/0:8,0:4:8.34:0,8,107	0/0:9,0:3:8.66:0,9,68	0/0:14,0:13:29.51:0,30,215	0/0:14,0:13:20.77:0,21,151	0/0:16,0:11:5.50:0,5,62	0/0:13,0:12:24.63:0,25,155	1/1:0,11:11:27.09:383,27,0	0/0:28,0:25:34.71:0,35,320	0/0:21,0:19:20.09:0,20,168	0/0:18,0:15:16.36:0,16,129	0/0:16,0:16:48:0,48,531	0/0:17,0:14:28.53:0,29,208	0/0:12,0:11:13.47:0,13,65	0/0:17,0:16:5.56:0,6,29	0/1:26,0:20:1.02:1,0,110	0/0:18,0:14:23.17:0,23,177	0/1:20,0:14:19.58:20,0,142	0/0:12,0:10:25.75:0,26,158	./.	0/0:14,0:13:16.77:0,17,98	0/0:13,0:12:36.06:0,36,426	0/0:18,0:16:14.73:0,15,193	0/0:16,0:14:20.68:0,21,161	0/0:23,0:19:7.39:0,7,299	0/0:22,0:19:9.98:0,10,157	0/0:10,0:8:7.08:0,7,55
chr10	64601805	.	C	CT	736.90	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=4.244;DP=495;FS=1.503;HRun=8;HaplotypeScore=82.3143;InbreedingCoeff=0.6820;MQ=70.13;MQ0=37;MQRankSum=-2.565;QD=10.09;ReadPosRankSum=-1.450;VQSLOD=2.0812;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:71.99:0,72,651	0/0:8,0:6:11.92:0,12,100	0/1:39,0:16:3.87:4,0,127	0/0:25,0:13:10.10:0,10,116	1/1:7,8:14:24.54:271,25,0	0/0:14,0:13:21.01:0,21,192	0/0:13,0:8:9:0,9,82	1/1:2,17:19:51.15:585,51,0	0/0:11,0:11:21.01:0,21,192	0/0:23,0:21:38.94:0,39,343	0/0:26,0:24:50.96:0,51,454	0/0:14,0:11:18.01:0,18,165	0/0:11,0:11:32.99:0,33,293	0/0:17,0:14:29.88:0,30,262	0/0:14,0:13:23.82:0,24,194	0/0:17,0:16:11.93:0,12,95	0/0:27,0:21:35.99:0,36,323	0/0:25,0:21:7.16:0,7,406	0/0:19,0:15:33.02:0,33,302	0/0:16,0:14:36.01:0,36,329	0/0:4,0:1:3:0,3,27	0/0:13,0:12:21.01:0,21,192	0/0:11,0:11:30.02:0,30,274	0/0:9,0:9:21.01:0,21,192	0/0:18,0:17:29.01:0,29,244	0/0:26,0:23:63:0,63,565	0/0:22,0:20:26.85:0,27,242	0/0:9,0:7:18:0,18,165
chr10	64602314	.	T	TA	2444.74	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.505;DP=860;FS=1.576;HRun=4;HaplotypeScore=86.7996;InbreedingCoeff=0.9993;MQ=75.58;MQ0=0;MQRankSum=0.385;QD=36.49;ReadPosRankSum=-3.851;VQSLOD=1.8512;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:84.22:0,84,943	0/0:16,0:16:45.13:0,45,510	0/0:14,0:14:27.07:0,27,299	0/0:24,0:24:63.17:0,63,699	1/1:0,26:26:75.25:1025,75,0	0/0:31,0:31:84.24:0,84,953	0/0:45,0:45:99:0,123,1363	1/1:3,38:41:99:1541,114,0	0/0:29,0:29:87.25:0,87,986	0/0:33,0:33:87.24:0,87,974	0/0:28,0:28:75.21:0,75,843	0/0:26,0:26:78.22:0,78,884	0/0:41,0:41:99:0,117,1326	0/0:38,0:38:99:0,108,1196	0/0:49,0:49:99:0,138,1557	0/0:50,0:50:99:0,147,1630	0/0:33,0:33:90.26:0,90,1020	0/0:23,0:23:60.17:0,60,680	0/0:29,0:29:75.20:0,75,839	0/0:32,0:32:93.25:0,93,1044	0/0:23,0:23:66.19:0,66,749	0/0:26,0:26:72.20:0,72,816	0/0:26,0:26:75.17:0,75,829	0/0:34,0:34:93.26:0,93,1055	0/0:26,0:26:75.21:0,75,851	0/0:37,0:37:99:0,105,1181	0/0:37,0:37:99:0,108,1206	0/0:11,0:11:33.09:0,33,374
chr10	64602805	.	CGA	C	485.51	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=4.023;DP=497;FS=16.384;HRun=0;HaplotypeScore=70.1441;InbreedingCoeff=0.9824;MQ=76.07;MQ0=11;MQRankSum=1.337;QD=16.74;ReadPosRankSum=-3.300;VQSLOD=1.5857;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:33:59.79:0,60,600	0/0:13,0:13:36.12:0,36,611	0/0:40,0:26:70.33:0,70,1182	0/0:34,0:18:40.54:0,41,532	1/1:12,0:12:13.23:141,13,0	0/0:11,0:11:30.08:0,30,466	0/0:25,0:25:57.50:0,58,958	1/1:1,16:17:41.53:462,42,0	0/0:14,0:14:36.10:0,36,549	0/0:16,0:16:39.02:0,39,611	0/0:18,0:18:42.07:0,42,672	0/0:14,0:14:37.58:0,38,529	0/0:15,0:15:39.10:0,39,591	0/0:16,0:16:42.13:0,42,718	0/0:14,0:13:32.72:0,33,563	0/0:19,0:19:51.13:0,51,841	0/0:26,0:26:69.08:0,69,1154	0/0:13,0:13:39.03:0,39,587	0/0:12,0:12:29.66:0,30,409	0/0:21,0:21:60.04:0,60,966	0/0:10,0:10:27:0,27,372	0/0:10,0:10:27.06:0,27,456	0/0:18,0:17:38.83:0,39,587	0/0:26,0:26:66.06:0,66,1048	0/0:16,0:16:42.09:0,42,704	0/0:14,0:14:33.07:0,33,539	0/0:9,0:9:27.06:0,27,433	0/0:10,0:9:20.43:0,20,285
chr10	64603194	.	CT	C	1006.37	PASS	AB=0.897;AC=16;AF=0.286;AN=56;BaseQRankSum=8.400;DP=573;FS=5.899;HRun=13;HaplotypeScore=70.7067;InbreedingCoeff=0.2769;MQ=70.53;MQ0=2;MQRankSum=1.113;QD=3.70;ReadPosRankSum=1.290;VQSLOD=0.6704;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:8,35:45:97.39:706,97,0	0/0:7,0:7:6.01:0,6,58	0/1:16,2:17:11.35:11,0,141	0/1:12,0:11:10.65:11,0,71	1/1:3,0:20:28.49:82,28,0	0/0:14,0:15:29.20:0,29,311	0/0:18,2:20:23.15:0,23,382	1/1:9,0:24:26.79:78,27,0	1/1:5,9:14:23.85:175,24,0	0/0:19,1:21:50.91:0,51,478	0/0:15,0:15:15.64:0,16,296	0/0:25,1:27:46.99:0,47,580	0/1:17,3:20:26.53:27,0,244	0/0:19,0:19:36.03:0,36,336	0/1:25,4:29:12.62:13,0,516	0/1:14,2:18:7.89:8,0,241	0/0:18,1:19:32.16:0,32,468	0/0:16,1:18:25.95:0,26,387	0/1:18,5:24:39.90:40,0,273	0/0:20,1:22:47.81:0,48,425	0/0:15,2:18:19.98:0,20,336	0/1:14,3:18:20.83:21,0,286	0/1:24,2:27:13.87:14,0,344	0/0:14,1:18:16.83:0,17,292	0/0:18,0:19:28.70:0,29,399	0/0:21,2:23:15.01:0,15,291	0/0:19,3:24:0.94:0,1,301	0/0:15,1:16:20.10:0,20,338
chr10	64605192	.	TAG	T	866.71	PASS	AB=1.000;AC=33;AF=0.750;AN=44;BaseQRankSum=1.551;DP=177;FS=4.450;HRun=0;HaplotypeScore=52.1817;InbreedingCoeff=0.4501;MQ=97.77;MQ0=3;MQRankSum=-4.718;QD=8.58;ReadPosRankSum=-1.588;VQSLOD=2.3672;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,1:5:6.87:49,7,0	1/1:2,0:2:5.94:43,6,0	0/0:18,0:12:14.72:0,15,247	0/0:36,0:15:11.90:0,12,101	1/1:0,16:16:34.62:242,35,0	1/1:3,0:3:2.99:24,3,0	1/1:2,0:2:5.99:50,6,0	1/1:39,0:36:25.98:236,26,0	1/1:1,3:4:12.01:110,12,0	1/1:2,0:2:2.60:25,3,0	./.	./.	0/0:12,0:12:36.08:0,36,592	0/1:2,0:2:0:0,0,0	./.	./.	0/1:8,0:8:3.72:16,0,4	1/1:7,0:7:3.99:59,4,0	1/1:1,0:1:2.99:23,3,0	1/1:1,0:1:3:25,3,0	1/1:1,0:1:2.99:24,3,0	1/1:1,0:1:3:25,3,0	0/0:8,0:8:18.01:0,18,308	./.	1/1:1,0:1:3:26,3,0	./.	1/1:2,0:2:2.99:24,3,0	0/1:4,0:4:3.54:4,0,4
chr10	64605198	.	TAGATAGATATATATAA	T	1125.75	PASS	AC=2;AF=0.067;AN=30;BaseQRankSum=4.174;DP=158;FS=0.000;HRun=0;HaplotypeScore=110.8044;InbreedingCoeff=0.4473;MQ=97.58;MQ0=3;MQRankSum=-3.412;QD=70.36;ReadPosRankSum=1.846;VQSLOD=3.2497;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:2,0:2:3.01:0,3,97	0/0:1,0:1:1.82:0,2,5	0/0:16,0:10:11.92:0,12,432	0/0:36,0:15:23.72:0,24,303	1/1:4,12:16:36.12:1213,36,0	./.	./.	0/0:42,0:39:99:0,111,4315	0/0:0,0:3:9.03:0,9,276	./.	./.	0/0:1,0:1:2.22:0,2,7	0/0:13,0:13:39.13:0,39,2124	./.	./.	./.	0/0:8,0:8:8.99:0,9,253	0/0:5,0:5:9.03:0,9,275	0/0:1,0:1:3.01:0,3,67	0/0:1,0:1:2.96:0,3,19	./.	./.	0/0:6,0:6:18.06:0,18,1040	./.	./.	./.	./.	0/0:4,0:4:9:0,9,194
chr10	64605361	.	A	ACCT	216.12	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.479;DP=365;FS=0.000;HRun=0;HaplotypeScore=54.1316;InbreedingCoeff=0.8277;MQ=85.55;MQ0=0;MQRankSum=-3.132;QD=30.87;ReadPosRankSum=0.679;VQSLOD=3.4640;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,6:7:18.06:307,18,0	0/0:3,0:3:6.02:0,6,112	0/0:14,0:14:35.92:0,36,574	0/0:13,0:13:16.90:0,17,474	0/0:21,0:21:60.19:0,60,1086	0/0:14,0:14:42.13:0,42,752	0/0:14,0:14:42.13:0,42,735	0/0:41,0:40:99:0,114,2037	0/0:9,0:9:27.09:0,27,503	0/0:11,0:11:33.11:0,33,613	0/0:7,0:7:21.06:0,21,361	0/0:16,0:16:45.15:0,45,833	0/0:14,0:14:39.13:0,39,727	0/0:13,0:13:39.13:0,39,717	0/0:13,0:13:39.13:0,39,727	0/0:9,0:9:27.09:0,27,503	0/0:25,0:25:75.23:0,75,1364	0/0:13,0:13:39.13:0,39,727	0/0:16,0:16:48.16:0,48,885	0/0:6,0:6:18.06:0,18,336	0/0:17,0:17:51.16:0,51,918	0/0:11,0:11:33.11:0,33,585	0/0:8,0:8:24.08:0,24,437	0/0:14,0:14:42.12:0,42,750	0/0:7,0:7:21.06:0,21,361	0/0:17,0:17:48.15:0,48,865	0/0:9,0:8:27.08:0,27,463	0/0:3,0:3:9.03:0,9,168
chr10	64605367	.	CCACGT	C	163.98	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.113;DP=377;FS=3.759;HRun=0;HaplotypeScore=71.0926;InbreedingCoeff=0.8750;MQ=90.15;MQ0=0;MQRankSum=-4.102;QD=27.33;ReadPosRankSum=1.254;VQSLOD=3.2448;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,6:6:17.95:254,18,0	0/0:3,0:3:6.02:0,6,200	0/0:16,0:16:47.89:0,48,1337	0/0:15,0:16:48.15:0,48,1249	0/0:24,0:24:72.25:0,72,2362	0/0:13,0:13:39.13:0,39,1288	0/0:14,0:14:42.14:0,42,1335	0/0:42,0:41:99:0,120,3640	0/0:8,0:8:24.08:0,24,798	0/0:11,0:11:33.11:0,33,1099	0/0:8,0:8:24.07:0,24,705	0/0:14,0:14:42.14:0,42,1399	0/0:15,0:15:45.15:0,45,1439	0/0:11,0:11:33.11:0,33,1096	0/0:13,0:13:39.12:0,39,1202	0/0:9,0:9:27.09:0,27,899	0/0:24,0:24:72.25:0,72,2378	0/0:14,0:14:42.14:0,42,1364	0/0:18,0:18:54.19:0,54,1701	0/0:7,0:7:21.07:0,21,680	0/0:17,0:17:51.18:0,51,1681	0/0:12,0:12:33.11:0,33,1080	0/0:9,0:9:27.09:0,27,817	0/0:13,0:13:39.13:0,39,1298	0/0:6,0:6:18.06:0,18,599	0/0:17,0:17:51.18:0,51,1696	0/0:11,0:10:33.11:0,33,1059	0/0:6,0:6:18.06:0,18,599
chr10	64605825	.	AC	A	17377.48	PASS	AC=46;AF=0.821;AN=56;BaseQRankSum=3.630;DP=668;FS=0.000;HRun=3;HaplotypeScore=81.2510;InbreedingCoeff=0.9997;MQ=86.71;MQ0=0;MQRankSum=-5.949;QD=31.14;ReadPosRankSum=4.172;VQSLOD=4.8306;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,35:36:96.30:1185,96,0	1/1:0,16:16:42.13:517,42,0	0/0:27,0:26:45.37:0,45,691	0/0:23,0:23:28.54:0,29,478	1/1:2,28:30:81.15:963,81,0	1/1:0,26:26:69.22:852,69,0	1/1:0,24:24:57.18:702,57,0	1/1:3,29:32:81.14:900,81,0	1/1:2,13:15:33.10:407,33,0	1/1:1,19:20:57.14:685,57,0	1/1:1,16:17:39:444,39,0	1/1:0,20:20:45.14:555,45,0	0/0:20,0:20:60.17:0,60,803	1/1:0,16:16:39.12:481,39,0	1/1:0,36:36:96.30:1186,96,0	1/1:2,26:28:66.04:793,66,0	1/1:1,37:38:99:1259,102,0	1/1:2,32:34:81.25:1000,81,0	1/1:3,19:22:56.49:612,56,0	1/1:0,25:25:71.61:826,72,0	1/1:0,17:17:39.12:482,39,0	1/1:3,17:20:51.15:621,51,0	0/0:21,0:21:63.19:0,63,860	0/0:18,0:18:48.14:0,48,649	1/1:0,22:22:60.19:739,60,0	1/1:0,28:28:84.20:1007,84,0	1/1:1,21:22:57.04:678,57,0	1/1:0,14:14:39.12:481,39,0
chr10	64608813	.	G	GAAA	6837.41	PASS	AB=0.629;AC=42;AF=0.750;AN=56;BaseQRankSum=-3.339;DP=496;FS=7.362;HRun=12;HaplotypeScore=80.1268;InbreedingCoeff=0.7125;MQ=56.32;MQ0=3;MQRankSum=-2.195;QD=16.72;ReadPosRankSum=-1.519;VQSLOD=2.9558;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:36:73.16:0,73,790	1/1:5,5:11:15.03:243,15,0	0/0:3,0:4:8.43:0,8,52	0/0:8,0:4:5.97:0,6,62	1/1:13,7:24:33.84:439,34,0	1/1:13,14:29:39.09:637,39,0	1/1:8,13:26:18.70:726,19,0	1/1:7,0:11:15.16:78,15,0	0/1:7,0:15:18.20:18,0,52	1/1:11,5:20:27:352,27,0	1/1:5,7:12:24.08:423,24,0	1/1:10,8:20:25.25:327,25,0	0/0:10,0:10:21.85:0,22,223	1/1:7,8:15:18.06:312,18,0	1/1:8,10:19:21.06:337,21,0	1/1:5,5:13:15.01:213,15,0	1/1:8,12:20:9.69:359,10,0	1/1:5,6:12:9.03:165,9,0	1/1:12,4:14:16.12:230,16,0	1/1:8,5:17:19.19:213,19,0	0/1:6,9:21:68.41:350,0,68	1/1:9,7:21:36.01:483,36,0	0/0:13,0:13:33.01:0,33,336	0/0:12,0:15:21.95:0,22,278	1/1:9,6:20:28.58:370,29,0	1/1:11,3:18:21.01:263,21,0	1/1:7,9:19:15.03:243,15,0	1/1:1,3:4:3.01:55,3,0
chr10	64608955	.	C	CA	1622.86	PASS	AB=0.792;AC=37;AF=0.661;AN=56;BaseQRankSum=-0.258;DP=523;FS=0.815;HRun=16;HaplotypeScore=72.7963;InbreedingCoeff=-0.0488;MQ=44.27;MQ0=20;MQRankSum=-1.772;QD=3.45;ReadPosRankSum=-1.730;VQSLOD=-0.1642;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:26:5.52:16,6,0	1/1:5,2:7:2.99:24,3,0	0/0:7,0:2:2.34:0,2,8	0/1:8,0:5:11.60:12,0,13	0/1:9,9:18:21.55:36,0,22	0/1:7,12:21:9.77:83,0,10	0/1:15,14:31:22.48:108,0,22	1/1:28,0:30:28.72:142,29,0	1/1:7,0:7:5.24:31,5,0	1/1:9,11:20:24.71:174,25,0	0/1:11,4:19:23.50:99,0,24	0/1:16,1:18:3.14:3,0,38	0/0:9,0:8:5.52:0,6,30	1/1:13,1:17:1.30:47,1,0	0/0:11,3:14:1.55:0,2,6	1/1:7,8:17:2.07:67,2,0	0/1:22,9:28:9.33:120,0,9	1/1:16,7:19:2.35:99,2,0	1/1:19,2:19:17.84:129,18,0	0/1:15,3:19:25.76:87,0,26	1/1:12,7:18:11.96:93,12,0	1/1:6,1:7:3.88:26,4,0	0/1:18,0:17:10.88:11,0,53	0/0:22,1:20:16.94:0,17,99	1/1:10,10:20:14.78:105,15,0	0/1:14,6:19:15.52:77,0,16	1/1:7,8:15:17.72:125,18,0	0/1:17,5:20:28.97:66,0,29
chr10	64610874	.	T	TC	9383.97	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=8.862;DP=571;FS=0.866;HRun=1;HaplotypeScore=102.7800;InbreedingCoeff=0.9860;MQ=73.89;MQ0=0;MQRankSum=-4.588;QD=20.22;ReadPosRankSum=4.995;VQSLOD=5.1568;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,27:28:60.20:886,60,0	1/1:7,0:7:20.94:168,21,0	0/0:15,0:16:26.03:0,26,381	0/0:24,0:24:44.62:0,45,545	1/1:22,0:22:41.90:345,42,0	1/1:22,0:22:50.87:408,51,0	1/1:32,0:32:71.70:543,72,0	0/0:19,0:19:50.98:0,51,556	1/1:1,19:20:48.16:706,48,0	1/1:22,0:22:56.32:389,56,0	1/1:5,0:5:8.96:67,9,0	1/1:28,0:28:71.70:544,72,0	0/0:20,0:20:56.83:0,57,659	1/1:20,0:20:56.64:446,57,0	1/1:31,0:30:74.69:568,75,0	1/1:21,0:21:41.81:314,42,0	1/1:23,0:23:56.81:442,57,0	1/1:21,0:21:50.76:385,51,0	1/1:25,0:25:62.29:437,62,0	1/1:13,0:13:29.88:234,30,0	1/1:40,0:40:99:790,105,0	1/1:12,0:12:32.94:277,33,0	0/0:8,0:8:21.07:0,21,270	0/0:20,0:20:60.07:0,60,719	1/1:15,0:15:38.84:308,39,0	1/1:21,0:21:56.30:397,56,0	1/1:23,0:22:56.87:464,57,0	1/1:13,0:13:32.93:266,33,0
chr10	64610875	.	C	CT	17308.59	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-0.918;DP=581;FS=0.861;HRun=1;HaplotypeScore=75.5984;InbreedingCoeff=0.9864;MQ=73.68;MQ0=0;MQRankSum=-4.088;QD=36.75;ReadPosRankSum=4.850;VQSLOD=5.2127;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:27:59.34:419,59,0	1/1:0,7:7:21.07:334,21,0	0/0:16,0:16:37.36:0,37,435	0/0:25,0:25:38.33:0,38,590	1/1:1,22:23:50.97:720,51,0	1/1:1,21:22:51.17:810,51,0	1/1:0,31:31:72.25:1147,72,0	0/0:19,0:19:50.98:0,51,587	1/1:19,0:19:47.62:360,48,0	1/1:1,22:23:66.17:979,66,0	1/1:0,5:5:9.03:143,9,0	1/1:1,29:30:72.25:1147,72,0	0/0:22,0:22:56.83:0,57,701	1/1:0,20:20:57.03:901,57,0	1/1:2,31:32:75.26:1195,75,0	1/1:1,20:21:42.14:669,42,0	1/1:0,23:23:57.19:907,57,0	1/1:0,21:21:54.17:836,54,0	1/1:2,24:26:72.21:1081,72,0	1/1:0,13:13:33.04:494,33,0	1/1:2,40:42:99:1672,105,0	1/1:0,12:12:33.11:520,33,0	0/0:7,0:7:21.07:0,21,289	0/0:21,0:21:60.08:0,60,767	1/1:0,15:15:39.13:607,39,0	1/1:1,21:22:63.18:940,63,0	1/1:0,23:22:57.19:903,57,0	1/1:0,13:13:33.11:525,33,0
chr10	64611157	.	C	CTCTTT	6983.06	PASS	AB=0.726;AC=31;AF=0.554;AN=56;BaseQRankSum=-8.327;DP=548;FS=93.297;HRun=0;HaplotypeScore=94.5267;InbreedingCoeff=-0.1104;MQ=45.91;MQ0=17;MQRankSum=-2.171;QD=15.08;ReadPosRankSum=1.354;VQSLOD=-0.3894;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:30,9:36:57.75:637,0,58	0/1:9,0:7:11.92:102,0,12	0/1:20,0:5:8.14:9,0,8	0/1:18,0:8:8.49:8,0,37	0/1:5,11:18:14.38:320,0,14	0/1:8,13:22:27.68:442,0,28	0/1:9,8:19:7.02:254,0,7	0/0:25,0:22:3.89:0,4,411	0/0:13,0:13:27.07:0,27,447	1/1:8,6:16:21.97:538,22,0	1/1:8,8:19:2.03:166,2,0	0/1:9,9:21:1.65:84,0,2	0/0:14,0:14:27.05:0,27,382	0/1:14,7:21:34.17:308,0,34	0/1:11,5:16:36.45:314,0,36	0/1:7,10:20:7.43:376,0,7	0/1:11,8:19:15.69:377,0,16	1/1:5,9:17:26.78:624,27,0	1/1:15,0:14:8.89:355,9,0	1/1:7,5:14:6.28:251,6,0	1/1:7,3:8:3.01:69,3,0	0/1:5,4:12:14.50:85,0,14	0/0:17,0:16:20.86:0,21,311	0/0:16,0:16:21.03:0,21,292	1/1:11,4:22:4.32:302,4,0	1/1:11,15:28:27.99:950,28,0	0/1:16,12:28:99:145,0,100	0/1:6,9:18:40.47:267,0,40
chr10	64611441	.	CAA	C	14237.40	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=10.260;DP=705;FS=0.733;HRun=9;HaplotypeScore=135.9714;InbreedingCoeff=0.9968;MQ=66.12;MQ0=0;MQRankSum=-4.497;QD=26.96;ReadPosRankSum=4.716;VQSLOD=3.7095;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,27:32:54.15:624,54,0	1/1:1,5:6:15.04:174,15,0	0/0:21,0:20:29.19:0,29,542	0/0:19,0:15:35.61:0,36,524	1/1:3,12:15:29.97:328,30,0	1/1:0,22:22:57.17:655,57,0	1/1:3,32:35:81.16:935,81,0	0/0:7,0:34:79.80:0,80,745	0/0:1,0:20:37.43:0,37,132	1/1:1,26:27:78.22:892,78,0	1/1:1,26:27:75.22:865,75,0	1/1:2,27:29:75.22:869,75,0	0/0:25,0:25:66.23:0,66,1078	1/1:2,21:23:57.16:664,57,0	1/1:2,43:45:99:1390,120,0	1/1:3,32:35:74.97:871,75,0	1/1:5,21:26:39.05:454,39,0	1/1:1,26:27:69.18:797,69,0	1/1:3,11:14:32.94:345,33,0	1/1:0,16:16:39.09:450,39,0	1/1:5,28:33:66.18:761,66,0	1/1:0,22:22:57.16:658,57,0	0/0:23,0:23:66.23:0,66,1076	0/0:31,0:32:80.72:0,81,1241	1/1:4,26:30:66.12:762,66,0	1/1:2,19:20:54.13:613,54,0	1/1:2,27:29:43.39:679,43,0	1/1:0,14:14:39.11:452,39,0
chr10	64616033	.	T	TGCACAC	2207.71	PASS	AB=0.899;AC=26;AF=0.565;AN=46;BaseQRankSum=2.382;DP=492;FS=0.000;HRun=0;HaplotypeScore=123.5460;InbreedingCoeff=0.5019;MQ=52.76;MQ0=9;MQRankSum=-4.328;QD=7.46;ReadPosRankSum=-2.241;VQSLOD=2.1175;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:33,0:33:5.40:138,5,0	./.	0/0:16,0:4:3.01:0,3,37	0/1:18,0:8:3:3,0,53	0/1:5,8:13:0:0,0,0	./.	0/1:26,0:25:0:0,0,0	0/0:12,0:12:33.11:0,33,584	0/0:23,0:23:27.05:0,27,437	1/1:15,0:15:24.08:580,24,0	./.	0/1:8,20:27:0:0,0,0	0/0:23,0:23:57.18:0,57,1177	0/1:14,0:14:0.04:0,0,0	./.	1/1:5,11:16:3.01:66,3,0	1/1:18,0:18:3.01:52,3,0	1/1:16,0:16:9.03:265,9,0	1/1:11,0:11:24.05:429,24,0	0/1:5,0:5:0:0,0,0	0/1:29,0:29:0.17:0,0,0	./.	0/0:11,0:10:21.07:0,21,470	0/0:46,0:46:99:0,105,2236	1/1:17,0:17:3.01:88,3,0	0/1:22,0:22:5.62:520,0,6	1/1:8,0:8:3.01:77,3,0	1/1:1,5:6:6.02:127,6,0
chr10	64616038	.	A	ACGCACACG	2895.76	PASS	AB=0.658;AC=29;AF=0.630;AN=46;BaseQRankSum=2.083;DP=515;FS=0.000;HRun=0;HaplotypeScore=140.9716;InbreedingCoeff=0.4948;MQ=47.60;MQ0=9;MQRankSum=-5.038;QD=8.94;ReadPosRankSum=-4.173;VQSLOD=0.1594;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:31,0:32:4.59:102,5,0	./.	0/0:15,0:3:3.01:0,3,35	0/1:15,0:5:3.21:3,0,72	./.	1/1:8,15:23:2.80:8,3,0	0/1:6,17:28:0:1,0,0	0/0:3,0:13:36.10:0,36,751	0/0:15,0:22:27.05:0,27,523	1/1:6,11:20:30.10:820,30,0	./.	1/1:25,0:24:0.47:1,0,0	0/0:24,0:25:60.19:0,60,1526	0/1:3,10:16:0.01:0,0,0	./.	1/1:13,0:13:2.87:74,3,0	1/1:3,14:19:2.78:52,3,0	1/1:2,13:16:6.02:208,6,0	1/1:8,0:8:24.05:531,24,0	0/1:3,4:7:0:0,0,0	1/1:7,21:33:0.47:1,0,0	./.	0/0:10,0:9:27.07:0,27,649	0/0:44,0:44:99:0,111,2917	1/1:6,12:18:3.01:124,3,0	0/1:5,15:29:16.44:808,0,16	1/1:4,6:12:5.89:126,6,0	1/1:8,0:8:9.39:181,9,0
chr10	64616040	.	G	GCACA	1450.19	PASS	AB=0.993;AC=20;AF=0.400;AN=50;BaseQRankSum=2.186;DP=464;FS=4.943;HRun=0;HaplotypeScore=122.5441;InbreedingCoeff=0.3490;MQ=42.77;MQ0=10;MQRankSum=-4.902;QD=6.04;ReadPosRankSum=-0.446;VQSLOD=2.3710;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:31:0.09:75,0,0	./.	0/0:14,0:2:2.98:0,3,21	0/0:13,0:3:6:0,6,63	0/1:18,0:17:0:0,0,0	0/0:19,0:19:7.84:0,8,36	0/1:23,0:21:0.15:0,0,0	0/0:14,0:13:18.04:0,18,402	0/0:24,0:24:26.87:0,27,336	1/1:15,0:15:5.13:279,5,0	./.	0/1:26,1:26:0.01:0,0,0	0/0:27,0:26:62.74:0,63,1155	0/1:13,0:13:0.01:0,0,0	./.	1/1:12,1:13:2.82:58,3,0	1/1:14,0:14:2.89:52,3,0	0/1:12,0:12:0.96:126,0,1	1/1:0,6:8:24.05:458,24,0	0/0:6,1:7:0:0,0,0	0/0:24,0:24:5.92:0,6,40	0/1:10,0:10:0:0,0,0	0/0:10,0:9:27.08:0,27,490	0/0:42,0:42:99:0,111,2144	1/1:13,1:14:3.01:70,3,0	0/1:24,1:25:99:326,0,109	0/1:10,0:10:5.07:42,0,5	0/1:7,0:7:34.47:97,0,34
chr10	64616066	.	ACG	A	1800.98	PASS	AB=0.986;AC=38;AF=0.731;AN=52;BaseQRankSum=7.548;DP=510;FS=1.101;HRun=0;HaplotypeScore=124.0223;InbreedingCoeff=0.6080;MQ=39.76;MQ0=17;MQRankSum=-4.804;QD=5.07;ReadPosRankSum=-3.492;VQSLOD=2.4215;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:28,3:31:8.89:97,9,0	1/1:3,0:2:2.99:24,3,0	./.	0/0:10,0:1:3:0,3,28	1/1:12,6:17:5.85:47,6,0	1/1:21,2:22:17.92:168,18,0	1/1:21,2:21:14.79:107,15,0	0/0:24,0:23:44.83:0,45,364	0/0:23,0:23:16.41:0,16,109	1/1:16,3:19:25.72:263,26,0	./.	1/1:20,4:22:5.60:37,6,0	0/0:25,0:24:13.54:0,14,741	1/1:16,1:17:5.70:41,6,0	1/1:12,6:15:5.63:34,6,0	1/1:11,2:13:8.93:77,9,0	1/1:16,0:16:11.08:91,11,0	1/1:13,1:14:14.33:114,14,0	0/1:8,0:7:1.22:73,0,1	1/1:10,0:10:5.95:43,6,0	0/1:35,1:33:26.77:27,0,59	1/1:11,2:13:5.92:49,6,0	0/0:13,0:11:9.98:0,10,390	0/0:44,5:49:99:0,106,1874	1/1:11,4:15:8.81:53,9,0	1/1:32,1:31:53.19:411,53,0	1/1:10,0:10:13.72:78,14,0	1/1:9,2:10:14.14:140,14,0
chr10	64616068	.	GCA	G	40.91	PASS	AB=1.000;AC=17;AF=0.370;AN=46;BaseQRankSum=6.181;DP=504;FS=8.083;HRun=0;HaplotypeScore=128.4617;InbreedingCoeff=0.2706;MQ=39.74;MQ0=15;MQRankSum=-2.174;QD=0.22;ReadPosRankSum=0.071;VQSLOD=1.7443;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:32,0:32:9.61:61,10,0	./.	./.	./.	0/0:17,0:17:0.46:0,0,1	1/1:22,0:21:5.73:27,6,0	0/0:23,0:21:5.25:0,5,24	0/0:19,1:19:42.12:0,42,561	0/1:23,0:24:1.04:1,0,57	0/1:20,0:20:13.79:14,0,90	./.	0/0:24,0:22:0.91:0,1,3	0/0:21,4:24:15.71:0,16,695	1/1:18,0:18:4.36:15,4,0	0/0:18,0:15:2.97:0,3,10	1/1:13,0:13:2.44:11,2,0	0/0:16,0:16:0.37:0,0,1	1/1:14,0:14:2.26:12,2,0	0/0:8,0:7:3.81:0,4,18	1/1:10,0:10:1.36:3,1,0	0/0:35,0:33:4.58:0,5,40	0/0:13,0:13:0:0,0,0	0/1:13,0:11:9.62:10,0,359	0/0:49,0:49:99:0,117,1805	./.	0/0:31,0:29:6.30:0,6,94	0/1:10,0:10:1.19:1,0,6	0/1:12,0:11:12.07:12,0,47
chr10	64616080	.	ACACACG	A	2275	PASS	AB=1.000;AC=42;AF=0.750;AN=56;BaseQRankSum=8.709;DP=525;FS=2.271;HRun=0;HaplotypeScore=151.9281;InbreedingCoeff=0.3104;MQ=43.05;MQ0=9;MQRankSum=-3.634;QD=5.52;ReadPosRankSum=-4.063;VQSLOD=1.3948;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:31,0:31:17.26:139,17,0	1/1:3,0:2:2.99:23,3,0	0/1:9,0:4:9.20:9,0,23	0/1:8,0:4:14.28:14,0,17	1/1:14,3:17:14.33:114,14,0	0/1:28,0:27:10.12:144,0,10	0/1:24,0:23:4.38:73,0,4	0/0:23,0:22:55.22:0,55,800	1/1:16,5:21:17.91:207,18,0	1/1:24,0:24:27.71:295,28,0	1/1:5,0:4:3:25,3,0	1/1:28,0:26:14.56:143,15,0	0/0:26,0:26:59.75:0,60,1551	1/1:22,0:22:11.32:92,11,0	1/1:15,0:13:8.44:57,8,0	1/1:16,0:16:21.46:199,21,0	1/1:14,0:14:17.69:128,18,0	1/1:13,0:13:2.42:80,2,0	1/1:5,0:4:5.14:33,5,0	1/1:12,0:12:8.41:61,8,0	0/1:36,0:33:34.74:35,0,53	1/1:14,0:14:9.87:75,10,0	0/0:13,0:12:35.78:0,36,772	0/0:51,0:51:99:0,135,3245	1/1:13,0:13:5.88:36,6,0	1/1:30,0:29:11.72:308,12,0	1/1:13,0:13:1.80:102,2,0	0/1:10,0:9:54.36:54,0,65
chr10	64616082	.	ACACG	A	2934.16	PASS	AB=1.000;AC=44;AF=0.786;AN=56;BaseQRankSum=9.043;DP=534;FS=6.761;HRun=0;HaplotypeScore=141.0871;InbreedingCoeff=0.4782;MQ=43.72;MQ0=9;MQRankSum=-2.901;QD=6.99;ReadPosRankSum=-4.538;VQSLOD=-0.2227;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:22,6:28:17.63:192,18,0	1/1:3,0:2:2.99:24,3,0	0/1:10,0:4:9.20:9,0,23	0/1:10,0:5:11.60:12,0,25	1/1:17,0:17:17.64:139,18,0	1/1:28,0:27:17.73:205,18,0	1/1:24,0:23:15.10:119,15,0	0/0:22,0:21:55.22:0,55,851	0/1:22,0:22:4.77:95,0,5	1/1:23,0:23:33.16:332,33,0	1/1:6,0:5:5.99:49,6,0	1/1:29,0:27:20.29:174,20,0	0/0:26,0:26:59.11:0,59,1215	1/1:22,0:22:16.50:129,17,0	1/1:16,0:13:8.65:60,9,0	1/1:16,0:16:24.46:227,24,0	1/1:14,0:14:17.69:130,18,0	1/1:14,0:14:22.97:179,23,0	1/1:5,0:4:2.43:45,2,0	1/1:12,0:12:11.87:85,12,0	0/1:37,0:34:29.56:81,0,30	1/1:14,0:14:8.97:73,9,0	0/0:13,0:12:35.78:0,36,644	0/0:53,0:53:99:0,129,2731	1/1:14,0:14:8.88:61,9,0	1/1:28,0:27:21.43:349,21,0	1/1:13,0:13:13.14:109,13,0	1/1:15,0:14:2.72:231,3,0
chr10	64616084	.	ACG	A	3580.84	PASS	AB=1.000;AC=44;AF=0.786;AN=56;BaseQRankSum=10.325;DP=538;FS=2.029;HRun=0;HaplotypeScore=128.1133;InbreedingCoeff=0.5242;MQ=44.27;MQ0=9;MQRankSum=-3.316;QD=8.47;ReadPosRankSum=-3.346;VQSLOD=2.8368;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:27:16.92:103,17,0	1/1:3,0:2:2.99:24,3,0	0/1:13,0:7:7.04:7,0,64	0/1:11,0:6:8.61:9,0,48	1/1:16,2:18:20.78:161,21,0	1/1:26,0:25:26.92:244,27,0	1/1:23,0:22:23.37:180,23,0	0/0:23,0:22:58.08:0,58,759	0/1:23,0:23:7.07:77,0,7	1/1:22,2:24:41.96:400,42,0	1/1:6,0:5:5.99:49,6,0	1/1:24,3:25:21.86:188,22,0	0/0:25,0:25:37.09:0,37,841	1/1:21,1:22:20.67:167,21,0	1/1:14,2:13:8.58:57,9,0	1/1:16,0:16:26.91:227,27,0	1/1:15,0:15:20.83:154,21,0	1/1:15,0:15:28.38:206,28,0	1/1:5,0:4:1.67:45,2,0	1/1:12,0:12:11.79:82,12,0	0/1:37,0:34:20.77:120,0,21	1/1:14,0:14:11.91:97,12,0	0/0:13,0:12:24:0,24,476	0/0:54,0:54:99:0,133,2118	1/1:11,2:13:11.88:86,12,0	1/1:28,1:28:54.42:455,54,0	1/1:13,0:13:23.43:172,23,0	1/1:13,2:14:36.85:272,37,0
chr10	64616096	.	ACG	A	4044.32	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=6.959;DP=553;FS=2.384;HRun=0;HaplotypeScore=124.9042;InbreedingCoeff=0.9500;MQ=51.90;MQ0=7;MQRankSum=-1.950;QD=11.86;ReadPosRankSum=-0.366;VQSLOD=3.3360;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:14.53:0,15,217	1/1:4,0:3:5.99:50,6,0	0/0:21,0:13:31.30:0,31,441	0/0:16,0:11:30.07:0,30,435	0/0:20,0:20:26.68:0,27,177	1/1:26,0:25:35.49:299,35,0	1/1:21,0:20:29.38:230,29,0	0/0:22,0:22:60.04:0,60,904	0/0:20,0:20:26.74:0,27,247	1/1:23,1:25:28:378,28,0	1/1:6,0:5:8.99:75,9,0	1/1:27,1:26:33.91:277,34,0	0/0:23,0:23:62.67:0,63,1021	1/1:22,0:22:33.18:277,33,0	1/1:16,1:15:14.37:100,14,0	1/1:18,0:18:32.91:284,33,0	1/1:19,0:19:31.19:229,31,0	1/1:14,0:14:32.03:233,32,0	1/1:9,0:8:23.99:210,24,0	1/1:11,0:11:17.72:128,18,0	1/1:37,0:35:32.30:268,32,0	1/1:14,0:14:10.17:91,10,0	0/0:12,0:11:33.03:0,33,558	0/0:50,0:50:99:0,132,2294	1/1:14,0:14:14.87:111,15,0	1/1:26,1:27:21.61:388,22,0	1/1:12,0:14:10.71:156,11,0	1/1:15,0:14:34.56:261,35,0
chr10	64619170	.	AAAATC	A	4959.20	PASS	AB=0.874;AC=36;AF=0.643;AN=56;BaseQRankSum=10.524;DP=468;FS=8.844;HRun=0;HaplotypeScore=101.3100;InbreedingCoeff=0.6291;MQ=62.83;MQ0=2;MQRankSum=-3.236;QD=14.76;ReadPosRankSum=8.696;VQSLOD=2.2896;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:18:43.70:0,44,867	1/1:4,0:4:7.93:52,8,0	0/0:16,0:7:8.04:0,8,150	0/0:12,0:7:21.06:0,21,386	0/1:21,0:21:99:159,0,119	1/1:22,0:21:41.77:304,42,0	1/1:14,1:15:20.81:212,21,0	0/0:41,0:40:99:0,106,2075	0/0:7,0:7:9.03:0,9,198	1/1:20,2:21:55.09:545,55,0	1/1:18,1:19:18.13:293,18,0	1/1:9,0:9:5.90:45,6,0	0/0:15,0:15:39.12:0,39,822	1/1:12,0:12:1.36:126,1,0	1/1:13,0:13:20.94:169,21,0	1/1:20,1:21:45.95:379,46,0	1/1:22,2:24:31.16:433,31,0	0/1:11,1:12:1.55:130,0,2	1/1:22,1:23:20.22:449,20,0	1/1:20,0:20:27.25:342,27,0	0/1:4,5:9:38.01:67,0,38	1/1:4,0:4:9.01:97,9,0	0/0:16,0:16:42.09:0,42,848	0/0:5,0:5:15.05:0,15,408	1/1:25,0:25:32.72:264,33,0	1/1:23,0:23:40.25:483,40,0	0/1:12,1:13:21.83:108,0,22	1/1:25,0:25:24.17:304,24,0
chr10	64619171	.	AAATC	A	9625.97	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=3.781;DP=441;FS=2.078;HRun=0;HaplotypeScore=74.4949;InbreedingCoeff=0.9065;MQ=65.76;MQ0=2;MQRankSum=-3.522;QD=30.75;ReadPosRankSum=6.555;VQSLOD=4.2707;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:18:43.02:0,43,677	1/1:0,4:4:8.94:135,9,0	0/0:16,0:8:10.99:0,11,174	0/0:13,0:8:24:0,24,391	1/1:19,3:22:10.42:312,10,0	1/1:3,17:19:45.05:708,45,0	1/1:2,11:13:21.07:325,21,0	0/0:38,0:37:95.54:0,96,1677	0/0:7,0:7:9.03:0,9,170	1/1:2,18:19:57.15:810,57,0	1/1:2,15:17:36:509,36,0	1/1:0,8:8:6.02:101,6,0	0/0:14,0:14:36.12:0,36,681	1/1:0,11:11:17.95:302,18,0	1/1:0,13:13:21.07:353,21,0	1/1:2,17:19:48.10:765,48,0	1/1:2,20:22:51.17:832,51,0	1/1:1,10:11:15.01:239,15,0	1/1:2,19:21:53.03:882,53,0	1/1:0,17:17:45.08:715,45,0	1/1:7,2:9:4.91:86,5,0	1/1:0,4:4:9.03:125,9,0	0/0:16,0:16:33.09:0,33,644	0/0:5,0:5:15.05:0,15,352	1/1:2,22:24:38.96:576,39,0	1/1:4,17:21:57.12:902,57,0	1/1:2,10:12:11.89:188,12,0	1/1:2,23:25:48:759,48,0
chr10	64619172	.	AATC	A	6800.10	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=9.073;DP=427;FS=0.955;HRun=0;HaplotypeScore=76.2550;InbreedingCoeff=0.9196;MQ=68.54;MQ0=2;MQRankSum=-4.796;QD=22.52;ReadPosRankSum=6.062;VQSLOD=4.5488;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:17:42.12:0,42,526	1/1:4,0:4:8.86:77,9,0	0/0:17,0:9:13.89:0,14,205	0/0:13,0:9:26.30:0,26,395	1/1:4,12:17:35.56:447,36,0	1/1:19,1:19:44.92:466,45,0	1/1:13,0:13:21.05:222,21,0	0/0:37,0:36:88.11:0,88,1424	0/0:7,0:7:9.03:0,9,141	1/1:20,0:19:56.82:588,57,0	1/1:16,1:17:36.03:394,36,0	1/1:8,0:8:6.01:63,6,0	0/0:13,0:13:35.98:0,36,565	1/1:11,0:11:18:190,18,0	1/1:13,0:13:21.05:221,21,0	1/1:18,1:19:48.11:514,48,0	1/1:22,0:22:51.12:532,51,0	1/1:11,0:11:15.02:156,15,0	1/1:20,0:20:60.01:612,60,0	1/1:17,0:17:45.09:490,45,0	1/1:7,0:7:5.84:62,6,0	1/1:4,0:4:9.03:106,9,0	0/0:15,0:15:36.08:0,36,585	0/0:5,0:5:15.05:0,15,296	1/1:22,1:23:39:410,39,0	1/1:18,3:21:57.11:628,57,0	1/1:11,0:11:12:125,12,0	1/1:23,1:24:47.98:498,48,0
chr10	64619721	.	GT	G	11483.06	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=11.130;DP=626;FS=0.000;HRun=7;HaplotypeScore=61.2238;InbreedingCoeff=0.9985;MQ=75.41;MQ0=1;MQRankSum=-3.535;QD=25.63;ReadPosRankSum=0.808;VQSLOD=5.2441;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:57.18:0,57,717	1/1:2,8:10:24.05:245,24,0	0/0:23,0:21:38.91:0,39,407	0/0:14,0:12:26.82:0,27,307	0/0:27,0:27:75.23:0,75,930	1/1:1,27:28:69.16:704,69,0	1/1:3,11:14:27.06:275,27,0	1/1:2,31:33:93.18:937,93,0	0/0:24,0:24:63.20:0,63,792	1/1:0,25:25:75.17:765,75,0	1/1:2,26:28:72.16:730,72,0	1/1:2,25:27:75.17:765,75,0	0/0:23,0:23:68.41:0,68,821	1/1:0,13:13:36.08:367,36,0	1/1:2,23:25:63.14:642,63,0	1/1:2,26:28:63.14:643,63,0	1/1:3,16:18:48.11:490,48,0	1/1:3,12:15:33.07:337,33,0	1/1:4,19:23:57.12:581,57,0	1/1:1,19:20:54.12:549,54,0	1/1:2,23:25:54.12:551,54,0	1/1:3,15:18:42.09:426,42,0	0/0:32,0:32:87.27:0,87,1081	0/0:15,0:15:42.13:0,42,527	1/1:0,23:23:57.13:581,57,0	1/1:2,28:30:84.19:857,84,0	1/1:3,32:35:81.05:826,81,0	1/1:0,9:9:21.05:213,21,0
chr10	64623052	.	AAAG	A	24298.53	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=13.406;DP=738;FS=0.943;HRun=0;HaplotypeScore=144.5838;InbreedingCoeff=0.9988;MQ=82.41;MQ0=0;MQRankSum=-6.432;QD=47.83;ReadPosRankSum=5.289;VQSLOD=6.5627;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,102,2487	1/1:0,8:8:24.08:444,24,0	0/0:31,0:31:22.44:0,22,1564	0/0:21,0:21:24.33:0,24,948	1/1:0,24:24:48.10:829,48,0	1/1:0,20:20:51.17:941,51,0	1/1:0,27:27:69.24:1237,69,0	0/0:41,0:41:99:0,120,2519	0/0:22,0:22:66.23:0,66,1604	1/1:0,26:26:75.23:1331,75,0	1/1:0,21:21:56.65:1004,57,0	1/1:0,30:30:69.24:1282,69,0	0/0:22,0:22:66.19:0,66,1479	1/1:0,17:17:45.15:838,45,0	1/1:0,40:40:99:2102,114,0	1/1:0,34:34:87.30:1614,87,0	1/1:0,32:32:84.29:1560,84,0	1/1:0,22:22:63.22:1173,63,0	1/1:0,16:16:45.15:820,45,0	1/1:0,23:23:69.24:1276,69,0	1/1:0,52:52:99:2177,121,0	1/1:0,28:28:75.26:1366,75,0	0/0:23,0:23:69.22:0,69,1629	0/0:36,0:36:99:0,108,2557	1/1:0,22:22:51.17:939,51,0	1/1:0,19:19:54.18:1000,54,0	1/1:0,27:27:78.27:1420,78,0	1/1:0,20:20:51.17:947,51,0
chr10	64623383	.	GC	G	498.98	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.469;DP=518;FS=0.000;HRun=3;HaplotypeScore=75.6411;InbreedingCoeff=0.9834;MQ=83.63;MQ0=1;MQRankSum=-2.484;QD=19.19;ReadPosRankSum=-0.085;VQSLOD=3.0813;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,22:26:48.15:594,48,0	0/0:6,0:6:18.06:0,18,257	0/0:29,0:23:63.15:0,63,828	0/0:23,0:19:34.21:0,34,406	0/0:24,0:24:66.21:0,66,929	0/0:14,0:14:36.12:0,36,518	0/0:15,0:15:39.13:0,39,551	0/0:29,0:29:78.24:0,78,1083	0/0:13,0:13:39.12:0,39,542	0/0:20,0:20:57.18:0,57,804	0/0:23,0:23:57.13:0,57,811	0/0:28,0:28:78.26:0,78,1115	0/0:17,0:17:45.15:0,45,641	0/0:18,0:18:45.15:0,45,632	0/0:19,0:19:54.18:0,54,777	0/0:27,0:27:78.24:0,78,1084	0/0:22,0:22:57.18:0,57,801	0/0:18,0:18:48.16:0,48,673	0/0:15,0:15:42.14:0,42,603	0/0:16,0:16:39.12:0,39,542	0/0:8,0:7:24.08:0,24,345	0/0:10,0:10:21.05:0,21,302	0/0:16,0:16:45.15:0,45,628	0/0:10,0:10:24.08:0,24,344	0/0:17,0:17:48.16:0,48,680	0/0:21,0:21:60.19:0,60,839	0/0:19,0:18:50.43:0,50,723	0/0:12,0:12:36.12:0,36,509
chr10	64623393	.	CT	C	80.25	PASS	AB=0.892;AC=10;AF=0.179;AN=56;BaseQRankSum=4.280;DP=595;FS=2.637;HRun=16;HaplotypeScore=93.2811;InbreedingCoeff=0.0073;MQ=70.10;MQ0=2;MQRankSum=0.330;QD=0.40;ReadPosRankSum=1.355;VQSLOD=-0.4924;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:17,9:28:18.16:99,18,0	0/0:6,0:7:14.77:0,15,104	0/0:30,0:16:2.28:0,2,46	0/1:20,0:14:15.89:16,0,78	0/1:22,6:28:33.14:33,0,280	0/0:20,1:22:10.56:0,11,166	0/1:13,2:15:15.07:15,0,98	0/0:30,0:30:33.32:0,33,240	0/0:13,0:13:28.48:0,28,220	0/1:19,4:23:30.92:31,0,185	0/0:26,1:29:8.37:0,8,281	0/0:23,2:27:16.59:0,17,330	0/1:12,1:17:3.06:3,0,128	0/0:16,1:20:2.09:0,2,247	0/0:22,2:26:23.59:0,24,277	0/1:28,3:31:3.62:4,0,296	0/0:24,1:27:14.01:0,14,215	0/1:21,2:24:5.62:6,0,204	0/0:17,0:18:35.48:0,35,261	0/0:24,1:25:18.40:0,18,302	0/0:11,0:11:20.95:0,21,169	0/0:9,0:10:11.88:0,12,89	0/0:16,2:18:14.94:0,15,231	0/0:8,0:8:7.55:0,8,54	0/0:20,1:21:18.99:0,19,248	0/0:21,0:21:41.91:0,42,344	0/0:27,1:27:18.09:0,18,325	0/1:13,2:15:9.87:10,0,166
chr10	64624372	.	TGAA	T	1101.03	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.699;DP=628;FS=1.634;HRun=0;HaplotypeScore=89.7837;InbreedingCoeff=0.9997;MQ=89.85;MQ0=0;MQRankSum=-3.370;QD=32.38;ReadPosRankSum=1.208;VQSLOD=3.5807;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,31:34:75.21:1196,75,0	0/0:18,0:18:54.19:0,54,1183	0/0:23,0:23:49.02:0,49,986	0/0:29,0:29:74.92:0,75,1315	0/0:20,0:20:54.19:0,54,1193	0/0:24,0:24:72.23:0,72,1552	0/0:28,0:28:84.29:0,84,1853	0/0:28,0:28:81.27:0,81,1731	0/0:16,0:16:48.15:0,48,1025	0/0:23,0:23:66.21:0,66,1432	0/0:19,0:19:54.19:0,54,1207	0/0:20,0:20:57.20:0,57,1266	0/0:20,0:20:60.21:0,60,1338	0/0:12,0:12:36.12:0,36,797	0/0:33,0:33:96.33:0,96,2114	0/0:32,0:32:96.33:0,96,2145	0/0:23,0:23:66.23:0,66,1472	0/0:20,0:20:54.19:0,54,1198	0/0:17,0:16:45.15:0,45,1006	0/0:19,0:19:54.19:0,54,1200	0/0:30,0:30:90.31:0,90,2010	0/0:16,0:16:41.18:0,41,937	0/0:26,0:26:78.27:0,78,1726	0/0:26,0:26:78.27:0,78,1741	0/0:24,0:24:69.24:0,69,1535	0/0:17,0:17:51.18:0,51,1132	0/0:19,0:19:57.20:0,57,1259	0/0:12,0:12:36.12:0,36,804
chr10	64624807	.	T	TG	11074.15	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=3.897;DP=572;FS=0.762;HRun=7;HaplotypeScore=74.2044;InbreedingCoeff=0.9908;MQ=69.23;MQ0=1;MQRankSum=0.821;QD=28.18;ReadPosRankSum=2.195;VQSLOD=5.5690;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:63.06:0,63,600	1/1:2,8:10:15.05:181,15,0	0/0:16,0:13:29.95:0,30,269	0/0:23,0:21:15.74:0,16,316	1/1:3,16:19:45.14:542,45,0	1/1:1,12:13:33.03:380,33,0	1/1:5,18:23:45.14:542,45,0	0/0:23,0:23:57.08:0,57,550	0/0:14,0:14:39.05:0,39,371	1/1:3,14:17:42.13:506,42,0	1/1:2,12:14:33.10:398,33,0	1/1:2,20:22:51.14:602,51,0	0/0:16,0:16:42.03:0,42,398	1/1:4,20:24:54.17:650,54,0	1/1:3,21:24:54.17:652,54,0	1/1:1,26:27:72.22:870,72,0	1/1:2,23:25:63.19:759,63,0	1/1:5,19:24:54.17:652,54,0	1/1:6,20:25:34.47:696,34,0	1/1:3,21:24:57.16:673,57,0	1/1:1,27:28:75.23:906,75,0	1/1:0,7:7:17.97:198,18,0	0/0:17,0:17:42.06:0,42,405	0/0:39,0:39:99:0,114,1075	1/1:1,13:14:36.11:435,36,0	1/1:2,22:24:63.19:758,63,0	1/1:1,14:15:42.13:507,42,0	1/1:4,9:13:15.01:166,15,0
chr10	64625257	.	GA	G	667.09	PASS	AB=0.898;AC=7;AF=0.125;AN=56;BaseQRankSum=7.879;DP=535;FS=1.032;HRun=11;HaplotypeScore=66.2570;InbreedingCoeff=0.4517;MQ=77.89;MQ0=4;MQRankSum=1.671;QD=5.80;ReadPosRankSum=-2.928;VQSLOD=1.1044;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:25:22.45:89,22,0	0/1:5,1:6:6.59:7,0,142	0/1:32,1:23:15.56:16,0,118	0/0:34,1:23:13.76:0,14,158	0/0:14,0:14:36.08:0,36,373	0/0:16,0:16:36.09:0,36,384	0/0:11,0:12:32.91:0,33,333	1/1:8,28:38:61.89:682,62,0	0/0:12,0:12:30.06:0,30,311	0/0:24,1:26:17.36:0,17,572	0/0:18,0:18:45.10:0,45,471	0/0:14,0:14:39.10:0,39,416	0/0:16,0:16:39.08:0,39,403	0/1:11,2:13:10.20:10,0,307	0/0:20,1:21:26.50:0,26,487	0/0:31,0:32:86.87:0,87,869	0/0:14,0:14:39.08:0,39,408	0/0:19,0:21:50.94:0,51,516	0/0:19,1:21:26.46:0,26,470	0/0:16,1:17:17.40:0,17,372	0/0:10,1:13:5.26:0,5,239	0/0:6,0:6:15.04:0,15,160	0/0:7,0:7:15:0,15,148	0/0:17,0:17:42.11:0,42,448	0/0:16,2:19:7.70:0,8,471	0/0:21,2:23:35.48:0,35,569	0/0:31,1:34:98.94:0,99,1012	0/0:10,1:10:2.42:0,2,223
chr10	64625483	.	TA	T	433.44	PASS	AB=0.941;AC=4;AF=0.071;AN=56;BaseQRankSum=0.109;DP=506;FS=7.396;HRun=13;HaplotypeScore=63.8565;InbreedingCoeff=0.3897;MQ=66.87;MQ0=5;MQRankSum=-1.177;QD=5.78;ReadPosRankSum=0.469;VQSLOD=1.8556;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,25:32:71.55:525,72,0	0/0:12,0:12:27.04:0,27,258	0/1:28,0:8:4.71:5,0,20	0/0:17,0:4:2.41:0,2,35	0/0:16,0:16:30.04:0,30,287	0/0:16,0:16:35.37:0,35,349	0/0:12,0:13:29.80:0,30,264	0/0:26,1:27:43.50:0,44,545	0/0:8,0:8:15.02:0,15,146	0/0:20,0:21:17.12:0,17,318	0/0:19,0:19:43.22:0,43,422	0/0:12,0:13:32.88:0,33,300	0/0:15,1:16:23.20:0,23,386	0/0:17,0:17:27.01:0,27,359	0/0:22,0:23:48.72:0,49,432	0/0:21,0:21:48.05:0,48,456	0/0:20,2:22:10.24:0,10,415	0/0:15,1:16:16.96:0,17,305	0/1:13,2:15:7.76:8,0,245	0/0:21,0:21:27.58:0,28,363	0/0:8,0:8:23.96:0,24,217	0/0:9,0:9:18.02:0,18,170	0/0:10,1:11:2:0,2,168	0/0:13,0:13:38.98:0,39,367	0/0:25,1:26:53.20:0,53,673	0/0:29,0:29:53.10:0,53,491	0/0:30,0:30:48.29:0,48,597	0/0:6,0:6:15.02:0,15,146
chr10	64627591	.	CCACAGTTCTGCCTT	C	1495.43	PASS	AB=0.971;AC=3;AF=0.054;AN=56;BaseQRankSum=6.261;DP=780;FS=28.541;HRun=0;HaplotypeScore=290.8407;InbreedingCoeff=0.6441;MQ=86.50;MQ0=0;MQRankSum=-6.346;QD=24.12;ReadPosRankSum=0.441;VQSLOD=0.7472;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:0,29:29:39.13:1570,39,0	0/0:13,0:13:39.13:0,39,2340	0/0:27,0:27:66.20:0,66,3181	0/0:26,0:26:78.27:0,78,4400	0/0:17,0:17:48.16:0,48,2593	0/0:24,0:24:72.25:0,72,4417	0/0:36,0:36:99:0,102,6188	0/0:32,0:32:96.30:0,96,5499	0/0:28,0:28:84.29:0,84,5782	0/0:21,0:21:63.22:0,63,4261	0/0:17,0:17:48.15:0,48,3126	0/0:33,0:33:96.33:0,96,5784	0/0:30,0:30:87.30:0,87,5631	0/0:39,0:39:99:0,111,6085	0/0:42,0:42:99:0,120,7542	0/0:41,0:41:99:0,120,7973	0/0:45,0:45:99:0,135,8976	0/0:34,0:34:99:0,99,6700	0/0:30,0:30:90.31:0,90,5473	0/0:23,0:23:69.24:0,69,4557	0/0:42,0:42:99:0,123,7938	0/0:15,0:15:42.14:0,42,2644	0/0:16,0:16:42.14:0,42,2820	0/0:37,0:37:99:0,105,7260	0/0:22,0:22:63.22:0,63,4100	0/1:32,1:33:31.46:31,0,5923	0/0:21,0:21:63.22:0,63,4117	0/0:7,0:7:18.06:0,18,1256
chr10	64627711	.	T	TCC	388.12	PASS	AB=0.630;AC=1;AF=0.018;AN=56;BaseQRankSum=5.850;DP=808;FS=8.937;HRun=1;HaplotypeScore=100.4411;InbreedingCoeff=0.6388;MQ=80.14;MQ0=1;MQRankSum=-5.301;QD=22.83;ReadPosRankSum=-1.398;VQSLOD=0.7807;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:7,10:17:0.34:463,0,0	0/0:13,0:13:39.12:0,39,613	0/0:26,0:26:75.22:0,75,1115	0/0:18,0:18:52.32:0,52,719	0/0:19,0:19:57.19:0,57,930	0/0:19,0:18:57.19:0,57,929	0/0:37,0:37:99:0,111,1758	0/0:45,0:45:99:0,126,2033	0/0:27,0:27:78.27:0,78,1271	0/0:35,0:35:99:0,105,1648	0/0:21,0:21:63.20:0,63,1004	0/0:36,0:36:99:0,102,1664	0/0:32,0:32:93.32:0,93,1517	0/0:41,0:41:99:0,123,1957	0/0:48,0:48:99:0,144,2342	0/0:46,0:46:99:0,135,2103	0/0:30,0:30:87.30:0,87,1419	0/0:20,0:20:60.20:0,60,978	0/0:33,0:33:99:0,99,1548	0/0:24,0:24:72.24:0,72,1151	0/0:43,0:42:99:0,123,1977	0/0:35,0:35:99:0,105,1687	0/0:28,0:28:84.29:0,84,1366	0/0:23,0:23:66.21:0,66,1053	0/0:39,0:39:99:0,117,1883	0/0:20,0:20:60.20:0,60,958	0/0:23,0:23:69.23:0,69,1099	0/0:10,0:10:30.08:0,30,463
chr10	64627712	.	T	TTCTC	656.07	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.223;DP=808;FS=15.669;HRun=0;HaplotypeScore=134.4784;InbreedingCoeff=0.9993;MQ=79.69;MQ0=0;MQRankSum=-5.700;QD=38.59;ReadPosRankSum=-2.326;VQSLOD=2.5191;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,9:17:36.81:751,37,0	0/0:14,0:14:42.09:0,42,745	0/0:26,0:26:65.93:0,66,1142	0/0:17,0:17:44.96:0,45,720	0/0:20,0:20:57.20:0,57,1104	0/0:19,0:18:54.19:0,54,1047	0/0:38,0:38:99:0,105,1924	0/0:45,0:45:99:0,132,2367	0/0:27,0:27:78.26:0,78,1463	0/0:35,0:35:96.27:0,96,1681	0/0:21,0:21:63.21:0,63,1191	0/0:36,0:36:99:0,108,1979	0/0:33,0:33:96.32:0,96,1825	0/0:40,0:40:99:0,114,2108	0/0:48,0:48:99:0,141,2726	0/0:44,0:44:99:0,123,2278	0/0:30,0:30:87.29:0,87,1654	0/0:20,0:20:60.21:0,60,1161	0/0:32,0:32:96.31:0,96,1769	0/0:24,0:24:69.23:0,69,1306	0/0:41,0:41:99:0,111,2119	0/0:36,0:36:99:0,105,2000	0/0:28,0:28:78.26:0,78,1466	0/0:23,0:23:66.22:0,66,1193	0/0:40,0:40:99:0,117,2237	0/0:21,0:21:60.20:0,60,1132	0/0:23,0:23:69.23:0,69,1287	0/0:10,0:10:30.08:0,30,545
chr10	64628402	.	C	CT	17320.39	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-9.296;DP=738;FS=1.383;HRun=6;HaplotypeScore=78.3359;InbreedingCoeff=0.9809;MQ=82.94;MQ0=0;MQRankSum=-3.016;QD=32.80;ReadPosRankSum=3.831;VQSLOD=5.0084;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,108,1101	1/1:3,13:16:30.10:377,30,0	0/0:25,0:24:17.38:0,17,487	0/0:23,0:23:6.69:0,7,356	1/1:1,25:26:69.11:828,69,0	1/1:2,19:21:51.16:642,51,0	1/1:2,30:32:87.28:1095,87,0	0/0:25,0:25:63.12:0,63,633	0/0:26,0:26:78.18:0,78,796	1/1:3,32:35:93.29:1156,93,0	1/1:0,21:21:63.20:793,63,0	1/1:2,37:39:99:1389,111,0	0/0:28,0:28:75.14:0,75,750	1/1:3,33:36:99:1336,108,0	1/1:3,24:27:69.22:868,69,0	1/1:3,26:29:17.03:845,17,0	1/1:2,31:33:84.27:1057,84,0	1/1:2,15:17:42.13:528,42,0	1/1:0,17:17:51.14:615,51,0	1/1:1,14:16:42.13:525,42,0	1/1:3,39:42:99:1396,111,0	1/1:3,29:33:90.25:1111,90,0	0/0:20,0:20:48.08:0,48,476	0/0:25,0:25:69.14:0,69,697	1/1:4,26:30:69.22:868,69,0	1/1:4,22:26:65.80:828,66,0	1/1:2,21:23:60.05:725,60,0	1/1:0,9:9:27.09:340,27,0
chr10	64629206	.	C	CTGTT	2065.91	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-2.375;DP=805;FS=10.298;HRun=0;HaplotypeScore=130.8957;InbreedingCoeff=0.9841;MQ=65.66;MQ0=4;MQRankSum=-2.834;QD=44.91;ReadPosRankSum=-2.460;VQSLOD=3.5644;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:14,30:46:93.28:2161,93,0	0/0:14,0:14:30.10:0,30,486	0/0:34,0:31:30.07:0,30,450	0/0:23,0:20:15.97:0,16,213	0/0:40,0:40:71.51:0,72,1131	0/0:29,0:29:63.21:0,63,1019	0/0:20,0:20:42.14:0,42,681	0/0:39,0:39:66.20:0,66,1005	0/0:18,0:18:42.14:0,42,679	0/0:41,0:41:96.33:0,96,1554	0/0:25,0:25:51.17:0,51,822	0/0:34,0:34:78.25:0,78,1241	0/0:29,0:29:72.25:0,72,1167	0/0:24,0:24:54.18:0,54,874	0/0:43,0:42:96.33:0,96,1557	0/0:42,0:42:99:0,99,1602	0/0:27,0:27:60.19:0,60,948	0/0:19,0:19:39.09:0,39,604	0/0:22,0:20:24.08:0,24,389	0/0:25,0:25:66.23:0,66,1067	0/0:28,0:28:60.20:0,60,973	0/0:35,0:35:69.23:0,69,1119	0/0:28,0:28:69.21:0,69,1090	0/0:14,0:14:39.12:0,39,608	0/0:25,0:25:56.43:0,56,874	0/0:30,0:32:72.24:0,72,1129	0/0:35,0:35:72.23:0,72,1143	0/0:14,0:14:36.12:0,36,584
chr10	64629508	.	CTTGAT	C	22266.23	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=17.839;DP=806;FS=3.950;HRun=0;HaplotypeScore=158.4313;InbreedingCoeff=0.9988;MQ=87.88;MQ0=0;MQRankSum=-7.832;QD=41.46;ReadPosRankSum=3.762;VQSLOD=4.5850;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:94.51:0,95,2622	1/1:1,10:11:21.07:417,21,0	0/0:36,0:36:84.29:0,84,2359	0/0:26,0:26:66.16:0,66,1673	1/1:5,27:32:68.95:1194,69,0	1/1:6,11:17:27.09:534,27,0	1/1:4,24:28:51.17:945,51,0	0/0:35,0:35:87.29:0,87,2527	0/0:45,0:45:99:0,126,3619	1/1:5,22:27:63.19:1213,63,0	1/1:2,16:18:39.13:739,39,0	1/1:3,33:36:78.18:1504,78,0	0/0:41,0:41:99:0,111,3234	1/1:5,21:26:60.21:1191,60,0	1/1:2,38:40:87.16:1638,87,0	1/1:7,43:50:99:2379,120,0	1/1:3,13:16:24.08:477,24,0	1/1:8,19:27:42.06:769,42,0	1/1:6,19:25:57.15:1026,57,0	1/1:2,14:16:42.06:753,42,0	1/1:5,32:37:78.18:1406,78,0	1/1:0,22:22:56.79:915,57,0	0/0:18,0:18:48.16:0,48,1422	0/0:32,0:32:81.27:0,81,2307	1/1:2,15:17:39.05:709,39,0	1/1:4,32:36:96.29:1806,96,0	1/1:5,25:30:66.22:1266,66,0	1/1:2,24:26:72.16:1386,72,0
chr10	64629822	.	AGACCC	A	5054.87	PASS	AB=0.892;AC=24;AF=0.429;AN=56;BaseQRankSum=-4.854;DP=484;FS=11.770;HRun=0;HaplotypeScore=102.2659;InbreedingCoeff=-0.4879;MQ=40.60;MQ0=27;MQRankSum=-3.012;QD=13.81;ReadPosRankSum=-3.390;VQSLOD=2.6274;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:16,0:10:53.30:114,0,53	0/1:4,1:5:53.22:78,0,53	0/0:31,0:6:18.01:0,18,251	0/0:22,0:3:2.90:0,3,22	0/1:18,1:18:99:341,0,198	0/1:14,0:13:98.28:144,0,98	0/1:12,1:12:89.39:89,0,272	0/0:17,0:14:36.96:0,37,437	0/0:16,0:16:17.77:0,18,286	0/1:18,1:21:99:572,0,396	0/1:6,4:11:48.97:49,0,132	0/1:19,0:17:51.86:52,0,352	0/0:7,0:7:18.05:0,18,246	0/1:10,6:15:99:130,0,258	0/1:18,0:17:99:359,0,158	0/1:14,2:16:86.60:87,0,314	1/1:14,1:12:19.61:244,20,0	0/1:8,2:9:45.42:45,0,153	0/1:23,4:24:99:531,0,333	0/1:14,6:21:99:392,0,411	1/1:2,0:2:5.60:41,6,0	0/1:9,0:8:93.97:138,0,94	0/0:19,0:19:49.83:0,50,578	0/1:13,0:13:5.59:6,0,203	0/1:17,1:16:99:253,0,154	0/1:26,3:29:99:951,0,401	0/1:25,4:29:99:407,0,534	0/1:18,0:17:31.60:32,0,246
chr10	64631283	.	C	CT	2355.76	PASS	AB=0.693;AC=34;AF=0.607;AN=56;BaseQRankSum=-4.083;DP=585;FS=2.539;HRun=15;HaplotypeScore=75.8659;InbreedingCoeff=0.0242;MQ=73.60;MQ0=2;MQRankSum=-0.066;QD=4.76;ReadPosRankSum=-2.306;VQSLOD=1.5586;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:8,24:32:2.44:195,0,2	0/1:2,9:11:3.19:75,0,3	0/0:32,0:22:14.06:0,14,87	0/0:20,0:15:14.42:0,14,69	1/1:10,20:31:1.35:197,1,0	0/1:5,11:17:26.24:111,0,26	1/1:5,11:17:14.83:115,15,0	0/1:26,0:30:6.97:7,0,107	0/1:10,0:12:6.07:6,0,44	1/1:12,8:21:17.77:131,18,0	0/1:12,6:18:42.79:89,0,43	0/1:6,6:13:7.08:31,0,7	0/1:13,0:14:14.79:15,0,16	1/1:8,9:18:1.70:105,2,0	1/1:7,19:26:11.99:101,12,0	0/1:12,17:31:5.16:76,0,5	0/1:9,12:22:1.45:64,0,1	0/1:5,18:25:3.79:19,0,4	1/1:6,7:14:14.05:132,14,0	0/1:10,13:24:6.97:186,0,7	1/1:12,3:15:18.54:137,19,0	1/1:10,16:29:6.97:204,7,0	0/0:15,0:15:11.27:0,11,82	0/0:21,0:22:25.32:0,25,140	0/1:9,14:24:27.54:87,0,28	1/1:10,17:27:44.87:337,45,0	0/1:4,14:19:3.18:75,0,3	1/1:1,4:5:3:25,3,0
chr10	64635594	.	T	TAA	1591.70	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=10.103;DP=603;FS=0.596;HRun=9;HaplotypeScore=77.4785;InbreedingCoeff=0.8668;MQ=65.89;MQ0=0;MQRankSum=-1.271;QD=35.37;ReadPosRankSum=-1.171;VQSLOD=3.4854;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,41:45:99:1686,112,0	0/0:12,0:13:29.66:0,30,282	0/0:13,0:13:24.02:0,24,255	0/0:12,0:11:5.02:0,5,164	0/0:27,0:27:61.24:0,61,724	0/0:20,0:20:57.14:0,57,607	0/0:13,0:13:33.08:0,33,351	0/0:30,0:30:69.13:0,69,726	0/0:14,0:14:42.11:0,42,447	0/0:20,0:20:54.12:0,54,575	0/0:20,0:20:57.14:0,57,607	0/0:25,0:25:38.63:0,39,606	0/0:20,0:20:47.23:0,47,509	0/0:13,0:13:30.05:0,30,319	0/0:26,0:27:71.91:0,72,746	0/0:26,0:26:60.12:0,60,639	0/0:27,0:27:75.19:0,75,798	0/0:33,0:33:90.21:0,90,954	0/0:22,0:22:57.11:0,57,600	0/0:22,0:22:54.08:0,54,567	0/0:10,0:10:15.01:0,15,160	0/0:18,0:19:45.07:0,45,534	0/0:31,0:31:81.15:0,81,846	0/0:20,0:20:57.14:0,57,607	0/0:21,0:21:60.15:0,60,639	0/0:26,0:26:75.18:0,75,798	0/0:24,0:24:63.13:0,63,670	0/0:10,0:10:17.90:0,18,171
chr10	64636150	.	CT	C	143.88	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.445;DP=345;FS=4.094;HRun=2;HaplotypeScore=50.6765;InbreedingCoeff=0.5904;MQ=77.22;MQ0=1;MQRankSum=-3.806;QD=11.07;ReadPosRankSum=2.721;VQSLOD=2.0808;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,13:13:24.01:237,24,0	0/0:6,0:6:14.80:0,15,115	0/0:11,0:8:17.06:0,17,162	0/0:19,0:16:37.35:0,37,307	0/0:13,0:13:30.51:0,31,335	0/0:8,0:8:14.85:0,15,123	0/0:31,0:31:72.28:0,72,672	0/0:14,0:14:32.01:0,32,317	0/0:3,0:3:5.99:0,6,52	0/0:17,0:17:44.50:0,45,418	0/0:11,0:11:24:0,24,244	0/0:13,0:13:32.94:0,33,317	0/0:4,0:4:3.90:0,4,46	0/0:12,0:12:26.75:0,27,251	0/0:23,0:23:52.06:0,52,625	0/0:18,0:18:40.38:0,40,365	0/0:22,0:22:56.78:0,57,581	0/0:16,0:16:24:0,24,222	0/0:12,0:12:36.05:0,36,362	0/0:9,0:9:17.98:0,18,165	0/0:24,0:24:55.42:0,55,535	0/0:9,0:9:18.80:0,19,161	0/0:3,0:3:8.99:0,9,77	0/0:5,0:5:8.98:0,9,72	0/0:2,0:2:3.01:0,3,44	0/0:14,0:14:36.01:0,36,341	0/0:6,0:6:11.99:0,12,129	0/0:7,0:7:18.02:0,18,191
chr10	64636160	.	CCCCCA	C	1366.92	PASS	AB=0.964;AC=30;AF=0.577;AN=52;BaseQRankSum=-2.055;DP=338;FS=6.307;HRun=0;HaplotypeScore=69.2082;InbreedingCoeff=0.3697;MQ=75.19;MQ0=1;MQRankSum=-0.855;QD=5.36;ReadPosRankSum=0.440;VQSLOD=0.8797;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:14,0:14:23.73:222,0,24	0/0:6,0:6:0:0,0,0	0/0:10,0:7:21.07:0,21,316	0/1:20,0:17:18.64:19,0,117	0/1:10,2:12:0.01:0,0,0	1/1:10,1:11:1.76:53,2,0	1/1:25,3:28:9.21:129,9,0	0/0:7,0:7:12.43:0,12,141	0/0:3,0:3:3.89:0,4,38	1/1:11,7:18:17.99:180,18,0	1/1:9,0:9:2.49:10,2,0	1/1:17,0:17:20.48:177,20,0	0/0:6,0:6:5.74:0,6,121	0/1:15,0:15:3.20:91,0,3	0/0:21,0:21:0:0,0,1	1/1:19,1:20:19.94:205,20,0	1/1:17,3:20:14.65:187,15,0	./.	1/1:11,0:11:4.24:29,4,0	1/1:6,1:7:2.84:14,3,0	1/1:25,0:25:16.70:119,17,0	1/1:11,0:11:3.10:21,3,0	0/0:2,0:2:3:0,3,25	0/0:2,0:2:2.99:0,3,24	./.	1/1:8,0:8:2.96:19,3,0	1/1:9,0:9:3.01:39,3,0	0/0:5,0:5:0:0,0,0
chr10	64636161	.	CCCCA	C	1733.04	PASS	AB=0.927;AC=39;AF=0.696;AN=56;BaseQRankSum=-3.024;DP=335;FS=1.839;HRun=0;HaplotypeScore=62.8006;InbreedingCoeff=0.5093;MQ=75.31;MQ0=1;MQRankSum=-1.748;QD=5.70;ReadPosRankSum=-0.479;VQSLOD=1.4460;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:14,0:14:15.90:192,0,16	1/1:6,0:6:5.98:46,6,0	0/0:11,0:8:24.05:0,24,279	0/1:19,0:16:0.92:1,0,123	0/1:12,0:12:0.01:0,0,0	1/1:10,1:11:8.30:80,8,0	1/1:26,2:28:10.85:110,11,0	0/0:7,0:7:11.93:0,12,117	0/0:3,0:3:2.50:0,2,9	1/1:18,0:18:17.99:158,18,0	1/1:7,1:8:5.67:34,6,0	1/1:17,0:17:27.01:279,27,0	0/0:7,0:7:9.42:0,9,123	1/1:13,2:15:21.10:178,21,0	1/1:19,2:21:11.82:84,12,0	1/1:18,2:20:24.42:224,24,0	1/1:20,0:20:17.85:167,18,0	0/1:8,11:19:0:0,0,0	1/1:10,1:11:8.74:64,9,0	1/1:3,4:7:2.84:14,3,0	1/1:23,1:24:17.64:134,18,0	1/1:5,5:10:6.30:65,6,0	0/0:2,0:2:2.99:0,3,25	0/0:1,0:1:2.99:0,3,24	0/1:2,0:2:0:0,0,0	1/1:7,1:8:2.96:19,3,0	1/1:4,5:9:2.92:17,3,0	1/1:5,0:5:2.99:23,3,0
chr10	64636162	.	CCCACCCCT	C	436.56	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.439;DP=336;FS=13.408;HRun=0;HaplotypeScore=89.2608;InbreedingCoeff=0.4061;MQ=75.31;MQ0=1;MQRankSum=-3.129;QD=33.58;ReadPosRankSum=-1.407;VQSLOD=2.0543;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,6:13:22.62:528,23,0	0/0:7,0:7:1.99:0,2,82	0/0:12,0:9:27.07:0,27,581	0/0:17,0:15:27.99:0,28,397	0/0:12,0:12:24.29:0,24,203	0/0:11,0:11:24.05:0,24,171	0/0:28,0:28:40.24:0,40,319	0/0:8,0:8:20:0,20,351	0/0:3,0:3:6.46:0,6,50	0/0:17,0:17:27.07:0,27,234	0/0:8,0:8:14.96:0,15,137	0/0:16,0:17:29.70:0,30,321	0/0:7,0:7:11.95:0,12,228	0/0:16,0:16:32.02:0,32,281	0/0:24,0:24:49.01:0,49,421	0/0:19,0:19:31.10:0,31,352	0/0:20,0:20:30.22:0,30,264	0/0:18,0:18:26.82:0,27,204	0/0:11,0:11:23.91:0,24,255	0/0:6,0:6:4.78:0,5,25	0/0:24,0:24:41.71:0,42,372	0/0:10,0:10:12.22:0,12,93	0/0:1,0:1:3.01:0,3,63	0/0:1,0:1:3.01:0,3,49	0/0:2,0:2:2.97:0,3,20	0/0:9,0:9:7.36:0,7,55	0/0:9,0:9:5.99:0,6,51	0/0:5,0:5:11.96:0,12,94
chr10	64636274	.	CCTTTA	C	1916.14	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.881;DP=610;FS=0.709;HRun=0;HaplotypeScore=111.2603;InbreedingCoeff=0.9935;MQ=83.12;MQ0=0;MQRankSum=-5.233;QD=44.56;ReadPosRankSum=0.607;VQSLOD=3.8475;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,39:43:96.33:2011,96,0	0/0:9,0:9:27.09:0,27,801	0/0:26,0:26:75.24:0,75,2135	0/0:15,0:15:39.13:0,39,1149	0/0:25,0:25:75.26:0,75,2229	0/0:16,0:16:42.13:0,42,1246	0/0:38,0:38:99:0,111,3279	0/0:19,0:19:54.19:0,54,1595	0/0:23,0:23:57.20:0,57,1786	0/0:32,0:32:93.32:0,93,2859	0/0:12,0:12:33.11:0,33,942	0/0:28,0:28:81.28:0,81,2519	0/0:11,0:11:33.11:0,33,991	0/0:16,0:16:48.16:0,48,1481	0/0:31,0:31:93.31:0,93,2847	0/0:29,0:29:84.29:0,84,2626	0/0:30,0:30:81.28:0,81,2392	0/0:16,0:16:48.16:0,48,1482	0/0:19,0:19:54.19:0,54,1632	0/0:10,0:10:30.10:0,30,902	0/0:29,0:29:81.28:0,81,2480	0/0:16,0:16:48.15:0,48,1337	0/0:11,0:11:33.11:0,33,1013	0/0:26,0:26:78.25:0,78,2263	0/0:15,0:15:42.14:0,42,1301	0/0:30,0:30:87.30:0,87,2638	0/0:28,0:28:84.29:0,84,2522	0/0:7,0:7:21.01:0,21,379
chr10	64639682	.	TA	T	5087.91	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=-2.437;DP=412;FS=3.287;HRun=11;HaplotypeScore=39.0628;InbreedingCoeff=0.9205;MQ=54.07;MQ0=33;MQRankSum=2.474;QD=15.51;ReadPosRankSum=4.296;VQSLOD=5.0927;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,19:21:47.95:394,48,0	1/1:1,8:9:17.98:148,18,0	0/0:5,0:4:5.95:0,6,52	0/0:3,0:2:6.01:0,6,57	1/1:4,11:13:18:205,18,0	1/1:6,18:21:41.95:345,42,0	1/1:1,9:10:20.98:172,21,0	0/0:13,0:34:74.89:0,75,431	0/0:11,1:11:8.45:0,8,295	1/1:3,14:17:43.97:349,44,0	1/1:4,12:14:32.85:257,33,0	1/1:4,7:11:20.96:172,21,0	0/0:9,0:9:21.04:0,21,216	1/1:1,8:9:20.97:172,21,0	1/1:2,15:16:35.96:296,36,0	1/1:5,12:15:13.46:205,13,0	1/1:7,15:17:35.96:295,36,0	1/1:7,21:25:44.94:369,45,0	1/1:4,14:14:35.95:294,36,0	1/1:3,12:13:29.96:246,30,0	1/1:0,8:8:14.98:123,15,0	1/1:0,7:7:17.94:142,18,0	0/0:6,0:5:11.98:0,12,109	0/0:9,0:7:21.05:0,21,224	1/1:2,10:10:20.97:172,21,0	1/1:3,16:18:36.89:380,37,0	1/1:4,12:15:32:252,32,0	1/1:3,7:7:11.99:99,12,0
chr10	64644017	.	A	AAAATAAATAAAT	8254.73	PASS	AB=0.590;AC=38;AF=0.792;AN=48;BaseQRankSum=-3.673;DP=240;FS=6.879;HRun=0;HaplotypeScore=76.3758;InbreedingCoeff=0.4322;MQ=55.45;MQ0=0;MQRankSum=-5.031;QD=39.31;ReadPosRankSum=-4.156;VQSLOD=1.7657;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:3,0:14:12.18:23,0,12	1/1:3,1:4:3.01:175,3,0	./.	0/0:6,0:5:2.98:0,3,21	0/1:5,0:12:3.23:20,0,3	1/1:6,6:14:21.07:1120,21,0	./.	1/1:42,0:50:81.24:1423,81,0	0/0:6,0:6:6.02:0,6,154	1/1:7,0:7:12.04:310,12,0	1/1:2,2:5:6.02:109,6,0	1/1:1,2:3:6.02:350,6,0	0/0:5,0:5:12.04:0,12,400	1/1:5,0:5:12.04:429,12,0	1/1:3,0:6:6.02:115,6,0	1/1:2,3:5:3.48:176,3,0	1/1:8,7:18:13.60:704,14,0	1/1:7,2:10:6.02:350,6,0	1/1:14,3:16:15.05:478,15,0	1/1:3,0:3:6.02:90,6,0	1/1:2,0:2:6.02:94,6,0	./.	./.	0/0:5,0:5:6.02:0,6,152	1/1:3,4:9:6.02:350,6,0	1/1:4,0:4:6.02:310,6,0	1/1:6,4:11:12.04:642,12,0	1/1:5,5:10:18.06:987,18,0
chr10	64644476	.	AAAAAAG	A	1522.19	PASS	AB=0.988;AC=24;AF=0.429;AN=56;BaseQRankSum=14.153;DP=664;FS=8.588;HRun=0;HaplotypeScore=182.5434;InbreedingCoeff=-0.1185;MQ=63.98;MQ0=1;MQRankSum=0.253;QD=2.97;ReadPosRankSum=8.374;VQSLOD=0.7380;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:27,1:28:18.94:102,0,19	1/1:8,0:8:9.03:47,9,0	0/0:14,0:12:33.46:0,33,520	0/0:6,0:5:11.99:0,12,107	0/1:33,1:34:64.80:65,0,104	0/1:20,0:20:10.21:10,0,67	0/1:26,0:26:3.05:44,0,3	0/0:34,0:34:92.23:0,92,1982	0/0:15,0:15:45.14:0,45,1290	0/1:28,0:28:3.81:157,0,4	0/1:25,1:26:74.86:133,0,75	0/1:27,0:27:43.07:43,0,67	0/0:25,0:25:72.25:0,72,2007	0/1:22,0:22:40.69:41,0,51	0/1:40,2:42:3.07:221,0,3	0/1:41,0:41:99:128,0,118	0/1:28,0:28:40.34:40,0,51	1/1:14,0:14:13.86:49,14,0	0/1:19,1:20:3.49:203,0,3	0/1:29,0:29:44.61:68,0,45	0/1:24,0:24:21.01:21,0,30	1/1:16,0:16:7.80:123,8,0	0/0:22,0:22:60.16:0,60,1471	0/0:26,0:26:78.27:0,78,2298	0/1:19,0:19:29.43:34,0,29	0/1:30,0:30:49.82:59,0,50	1/1:31,0:31:5.49:105,5,0	0/0:9,0:9:4.04:0,4,93
chr10	64644477	.	AAAAAG	A	6334.64	PASS	AB=0.976;AC=39;AF=0.696;AN=56;BaseQRankSum=11.853;DP=664;FS=11.255;HRun=0;HaplotypeScore=155.2741;InbreedingCoeff=0.7716;MQ=64.75;MQ0=1;MQRankSum=-3.533;QD=12.11;ReadPosRankSum=6.563;VQSLOD=2.8366;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:29:43.97:297,44,0	1/1:8,0:8:11.80:75,12,0	0/0:15,0:13:35.85:0,36,472	0/0:6,0:5:7.29:0,7,68	1/1:33,1:34:26.98:368,27,0	1/1:21,0:21:31.16:192,31,0	1/1:25,1:26:35.37:259,35,0	0/0:32,0:33:87.17:0,87,1614	0/0:15,0:15:45.13:0,45,1115	1/1:24,2:26:48.72:497,49,0	1/1:27,0:27:16.19:280,16,0	0/1:24,1:25:0.63:233,0,1	0/0:24,0:24:72.19:0,72,1699	1/1:21,1:22:9.24:230,9,0	1/1:40,1:41:61.81:500,62,0	1/1:42,1:43:29.13:678,29,0	0/1:27,1:28:4.96:219,0,5	1/1:14,0:14:23.57:150,24,0	1/1:20,0:20:39.96:366,40,0	1/1:27,1:28:27.88:334,28,0	1/1:25,0:25:10.01:168,10,0	1/1:15,2:17:43.27:397,43,0	0/0:22,0:22:63.11:0,63,1242	0/0:26,0:26:78.18:0,78,1961	1/1:18,1:19:14.31:194,14,0	1/1:30,0:30:43.29:388,43,0	1/1:28,3:31:48.43:466,48,0	0/1:9,0:9:7.93:44,0,8
chr10	64644478	.	AAAAG	A	14504.40	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=4.128;DP=655;FS=8.251;HRun=0;HaplotypeScore=114.6547;InbreedingCoeff=0.9791;MQ=64.87;MQ0=1;MQRankSum=-2.434;QD=28.27;ReadPosRankSum=4.818;VQSLOD=4.3657;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,26:29:47.93:701,48,0	1/1:0,8:8:11.94:136,12,0	0/0:14,0:12:32.74:0,33,355	0/0:7,0:6:14.59:0,15,97	1/1:19,14:33:67.11:1002,67,0	1/1:5,16:21:41.61:570,42,0	1/1:3,22:25:36.05:541,36,0	0/0:34,0:34:88.43:0,88,1330	0/0:15,0:15:42.13:0,42,917	1/1:4,22:26:71.49:985,71,0	1/1:4,23:27:59.79:736,60,0	1/1:3,21:24:41.92:633,42,0	0/0:24,0:24:66.18:0,66,1341	1/1:4,18:22:31.87:575,32,0	1/1:8,33:41:63.15:923,63,0	1/1:19,24:43:99:1609,120,0	1/1:6,22:28:20.57:573,21,0	1/1:2,11:13:24.05:363,24,0	1/1:2,17:19:50.96:636,51,0	1/1:4,23:27:68.54:838,69,0	1/1:1,23:24:33.08:526,33,0	1/1:10,7:17:50.94:611,51,0	0/0:22,0:22:54.12:0,54,948	0/0:26,0:26:78.14:0,78,1619	1/1:4,15:19:35.73:488,36,0	1/1:12,16:28:70.36:976,70,0	1/1:6,24:30:59.52:936,60,0	1/1:4,5:9:8.97:147,9,0
chr10	64644479	.	AAAG	A	9440.48	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=9.759;DP=645;FS=3.424;HRun=0;HaplotypeScore=120.6772;InbreedingCoeff=0.9773;MQ=65.83;MQ0=1;MQRankSum=-3.681;QD=18.81;ReadPosRankSum=3.460;VQSLOD=4.6916;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:28,1:29:48:440,48,0	1/1:8,0:8:11.93:93,12,0	0/0:15,0:13:35.10:0,35,330	0/0:7,0:6:11.93:0,12,96	1/1:30,2:32:80.66:738,81,0	1/1:17,3:20:41.99:417,42,0	1/1:24,0:24:35.97:316,36,0	0/0:34,0:34:78.21:0,78,1034	0/0:15,0:15:42.12:0,42,742	1/1:26,0:26:73.22:627,73,0	1/1:26,0:26:59.63:472,60,0	1/1:23,1:24:42.03:394,42,0	0/0:24,0:24:57.16:0,57,989	1/1:21,1:22:39.01:367,39,0	1/1:41,0:41:62.42:546,62,0	1/1:40,3:43:99:1064,117,0	1/1:25,2:27:42.04:409,42,0	1/1:12,1:13:23.99:210,24,0	1/1:18,0:18:48.78:410,49,0	1/1:25,1:26:71.39:575,71,0	1/1:24,0:24:32.92:286,33,0	1/1:16,1:17:50.88:448,51,0	0/0:22,0:22:51.10:0,51,745	0/0:26,0:26:72.13:0,72,1237	1/1:17,1:18:26.89:293,27,0	1/1:25,0:25:72.04:651,72,0	1/1:29,1:30:66.03:605,66,0	1/1:9,0:9:9:81,9,0
chr10	64646157	.	C	CT	1282.61	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-7.561;DP=698;FS=5.464;HRun=3;HaplotypeScore=68.2769;InbreedingCoeff=0.9988;MQ=92.19;MQ0=0;MQRankSum=-4.512;QD=34.67;ReadPosRankSum=-0.152;VQSLOD=4.0467;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,34:37:99:1377,99,0	0/0:17,0:17:39.12:0,39,468	0/0:29,0:29:75.21:0,75,881	0/0:30,0:30:84.21:0,84,991	0/0:35,0:35:96.29:0,96,1152	0/0:24,0:24:69.20:0,69,817	0/0:30,0:30:87.23:0,87,1020	0/0:34,0:34:96.28:0,96,1133	0/0:27,0:27:81.24:0,81,960	0/0:29,0:29:84.25:0,84,999	0/0:11,0:11:27.08:0,27,324	0/0:27,0:27:69.18:0,69,813	0/0:25,0:25:69.21:0,69,828	0/0:20,0:20:60.18:0,60,720	0/0:23,0:23:69.20:0,69,816	0/0:33,0:33:99:0,99,1188	0/0:25,0:25:75.21:0,75,886	0/0:17,0:17:45.12:0,45,527	0/0:16,0:16:42.12:0,42,495	0/0:19,0:19:57.17:0,57,684	0/0:29,0:29:78.20:0,78,911	0/0:27,0:27:75.23:0,75,900	0/0:20,0:20:48.15:0,48,575	0/0:19,0:19:54.17:0,54,648	0/0:24,0:23:63.19:0,63,756	0/0:21,0:21:60.17:0,60,711	0/0:36,0:34:99:0,108,1295	0/0:14,0:13:39.12:0,39,466
chr10	64648582	.	C	CTT	19411.67	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=-13.843;DP=670;FS=4.178;HRun=8;HaplotypeScore=68.1922;InbreedingCoeff=0.9990;MQ=75.96;MQ0=4;MQRankSum=-2.246;QD=38.29;ReadPosRankSum=2.343;VQSLOD=5.0323;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,30:33:87.30:1381,87,0	1/1:1,6:8:20.56:294,21,0	0/0:16,0:16:39.10:0,39,429	0/0:15,0:15:32.89:0,33,346	1/1:4,27:31:78.18:1182,78,0	1/1:3,19:22:54.18:838,54,0	1/1:2,14:16:42.14:667,42,0	0/0:33,0:33:84.21:0,84,937	0/0:25,0:25:69.12:0,69,738	1/1:2,34:37:99:1621,105,0	1/1:4,20:24:54.14:829,54,0	1/1:3,27:29:66.23:1048,66,0	0/0:23,0:23:63.15:0,63,693	1/1:5,18:24:48.16:762,48,0	1/1:4,21:25:60.20:951,60,0	1/1:2,29:30:72.25:1143,72,0	1/1:1,21:22:60.20:952,60,0	1/1:2,13:15:36.10:545,36,0	1/1:6,9:17:35.06:467,35,0	1/1:3,26:31:78.26:1203,78,0	1/1:4,21:25:63.21:1000,63,0	1/1:3,20:23:60.20:953,60,0	0/0:27,0:27:75.19:0,75,836	0/0:24,0:24:66.16:0,66,736	1/1:3,13:16:33.11:524,33,0	1/1:5,24:29:72.25:1139,72,0	1/1:2,22:26:71.73:1103,72,0	1/1:0,20:20:51.17:810,51,0
chr10	64649489	.	GTTTCTT	G	2709.31	PASS	AB=1.000;AC=41;AF=0.732;AN=56;BaseQRankSum=3.157;DP=346;FS=0.647;HRun=0;HaplotypeScore=71.6196;InbreedingCoeff=0.7164;MQ=74.03;MQ0=5;MQRankSum=0.069;QD=10.84;ReadPosRankSum=3.217;VQSLOD=1.8228;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:17:3.49:0,3,41	1/1:5,1:6:8.68:127,9,0	0/1:31,0:16:5.03:5,0,145	0/0:20,0:6:11.71:0,12,88	1/1:12,0:12:22.10:178,22,0	1/1:14,0:14:8.97:94,9,0	1/1:5,0:5:3.01:37,3,0	0/0:28,0:27:51.96:0,52,1096	0/0:7,0:7:13.29:0,13,333	1/1:15,0:15:10.76:144,11,0	1/1:15,1:15:10.47:186,10,0	1/1:11,0:11:16.84:178,17,0	0/0:13,0:13:17.94:0,18,337	1/1:8,0:8:10.56:83,11,0	1/1:7,0:6:3.01:37,3,0	1/1:11,1:12:12.02:155,12,0	1/1:8,1:9:10.43:150,10,0	1/1:11,0:10:21.02:280,21,0	1/1:24,0:24:13.58:150,14,0	1/1:6,0:6:15.03:178,15,0	1/1:9,0:9:8.98:74,9,0	1/1:4,0:4:3:25,3,0	0/0:8,0:8:17.98:0,18,281	0/0:2,0:2:6.01:0,6,116	1/1:19,0:18:24.17:210,24,0	1/1:15,0:15:23.52:207,24,0	1/1:11,0:10:17.95:201,18,0	1/1:4,1:5:14.98:196,15,0
chr10	64649494	.	TTTTTC	T	3912.89	PASS	AB=1.000;AC=42;AF=0.750;AN=56;BaseQRankSum=1.958;DP=335;FS=0.618;HRun=0;HaplotypeScore=57.1290;InbreedingCoeff=0.6636;MQ=65.51;MQ0=11;MQRankSum=-0.594;QD=15.34;ReadPosRankSum=-0.061;VQSLOD=2.7468;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:17,0:16:16.43:22,0,16	1/1:6,1:7:11.83:142,12,0	0/1:29,0:12:14.04:14,0,128	0/0:20,0:5:10.82:0,11,77	1/1:3,11:13:26.83:264,27,0	1/1:3,12:15:9.03:155,9,0	1/1:1,4:5:3.01:60,3,0	0/0:30,0:24:56.46:0,56,1006	0/0:7,0:7:10.98:0,11,274	1/1:13,0:13:20.18:185,20,0	1/1:4,12:15:22.09:210,22,0	1/1:11,0:10:23.85:249,24,0	0/0:11,0:11:19.75:0,20,300	1/1:5,0:5:11.70:85,12,0	1/1:4,1:4:7.99:83,8,0	1/1:5,1:6:12.02:162,12,0	1/1:13,0:13:18.55:200,19,0	1/1:8,3:10:24.71:341,25,0	1/1:18,1:19:29.15:205,29,0	1/1:5,2:7:8.06:213,8,0	1/1:5,0:5:8.98:74,9,0	1/1:4,0:4:3:25,3,0	0/0:9,0:9:20.97:0,21,279	0/0:3,0:3:6:0,6,102	1/1:17,2:18:32.49:293,32,0	1/1:2,15:17:30.62:308,31,0	1/1:6,4:9:24.48:325,24,0	1/1:6,1:7:20.68:296,21,0
chr10	64649495	.	TTTTC	T	3654.03	PASS	AB=0.963;AC=41;AF=0.732;AN=56;BaseQRankSum=2.677;DP=348;FS=3.053;HRun=0;HaplotypeScore=55.8670;InbreedingCoeff=0.6427;MQ=62.73;MQ0=13;MQRankSum=-1.276;QD=13.79;ReadPosRankSum=-0.335;VQSLOD=2.4301;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:17,0:15:2.34:37,0,2	1/1:6,1:7:13.27:146,13,0	0/1:29,0:11:21.76:22,0,107	0/0:20,0:5:10.81:0,11,68	1/1:13,1:13:26.22:222,26,0	1/1:13,1:14:9.03:139,9,0	1/1:4,0:4:3.01:46,3,0	0/0:33,0:26:42.78:0,43,805	0/0:7,0:7:12.75:0,13,224	1/1:13,1:14:22.17:192,22,0	1/1:18,0:17:23.75:204,24,0	1/1:9,2:10:23.87:230,24,0	0/0:11,0:11:19.17:0,19,257	1/1:5,0:5:12.06:86,12,0	0/1:7,1:7:10.85:55,0,11	1/1:7,0:7:11.32:141,11,0	1/1:13,1:14:24.06:196,24,0	1/1:12,0:11:23.63:268,24,0	1/1:19,0:19:31.83:234,32,0	1/1:7,0:7:17.78:209,18,0	1/1:4,0:4:11.35:82,11,0	1/1:4,0:4:3:25,3,0	0/0:9,0:9:20.96:0,21,255	0/0:3,0:3:6:0,6,89	1/1:18,3:20:33:318,33,0	1/1:16,1:17:29.74:287,30,0	1/1:12,0:11:25.37:257,25,0	1/1:5,2:7:19.56:258,20,0
chr10	64649496	.	TTTC	T	3475.38	PASS	AB=1.000;AC=42;AF=0.750;AN=56;BaseQRankSum=2.808;DP=349;FS=4.028;HRun=0;HaplotypeScore=52.1859;InbreedingCoeff=0.6692;MQ=62.19;MQ0=14;MQRankSum=-1.015;QD=13.02;ReadPosRankSum=-0.520;VQSLOD=2.7881;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,14:14:7.16:69,7,0	1/1:6,1:7:10.55:107,11,0	0/1:29,0:11:14.35:14,0,100	0/0:20,0:5:5.18:0,5,46	1/1:14,0:13:26.07:208,26,0	1/1:13,0:13:9.03:114,9,0	1/1:4,0:4:3.01:39,3,0	0/0:34,0:26:38.04:0,38,652	0/0:7,0:7:11.81:0,12,176	1/1:14,0:14:22.51:187,23,0	1/1:18,1:18:24.21:184,24,0	1/1:11,0:10:23.87:218,24,0	0/0:10,0:10:18.43:0,18,220	1/1:6,0:6:13.62:91,14,0	0/1:8,0:7:7.63:49,0,8	1/1:7,0:7:12.91:131,13,0	1/1:13,0:13:20.77:167,21,0	1/1:14,0:13:21.86:237,22,0	1/1:18,0:18:35.89:264,36,0	1/1:8,0:8:18.86:190,19,0	1/1:4,0:4:10.79:79,11,0	1/1:2,0:2:3:25,3,0	0/0:8,0:8:21:0,21,231	0/0:3,0:3:6:0,6,78	1/1:21,0:20:39.37:326,39,0	1/1:18,0:18:30.23:263,30,0	1/1:13,0:12:30.77:262,31,0	1/1:8,0:8:23.94:254,24,0
chr10	64649498	.	TC	T	3148.85	PASS	AB=0.992;AC=44;AF=0.786;AN=56;BaseQRankSum=2.404;DP=354;FS=23.825;HRun=1;HaplotypeScore=47.3277;InbreedingCoeff=0.4229;MQ=59.49;MQ0=17;MQRankSum=-2.055;QD=10.03;ReadPosRankSum=-1.045;VQSLOD=-0.4326;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:13:8.88:66,9,0	1/1:6,0:6:13.63:94,14,0	0/1:28,1:11:17.06:17,0,91	0/0:19,0:4:8.11:0,8,35	1/1:15,0:14:25.86:180,26,0	1/1:13,0:13:8.98:73,9,0	1/1:4,0:4:3:26,3,0	0/1:35,0:25:7.75:8,0,360	0/1:8,0:8:15.08:15,0,80	1/1:2,11:13:0.63:149,1,0	1/1:19,0:18:17.59:161,18,0	1/1:11,0:10:26.78:209,27,0	0/0:10,0:10:4.80:0,5,134	1/1:6,0:6:6.79:79,7,0	0/1:8,0:7:2.67:64,0,3	1/1:7,0:7:17.93:143,18,0	1/1:15,0:15:23.15:191,23,0	1/1:15,0:13:22.26:194,22,0	1/1:17,0:17:39.50:305,40,0	1/1:9,0:9:19.50:159,20,0	1/1:4,0:4:11.66:85,12,0	1/1:2,0:2:3:25,3,0	0/0:8,0:8:20.36:0,20,170	0/0:3,0:3:6:0,6,57	1/1:17,0:16:41.06:311,41,0	1/1:19,0:19:31.71:243,32,0	1/1:17,0:16:41.73:300,42,0	1/1:10,0:10:26.84:212,27,0
chr10	64650220	.	C	CAA	9077.40	PASS	AC=40;AF=0.741;AN=54;BaseQRankSum=-2.785;DP=501;FS=0.478;HRun=12;HaplotypeScore=70.5118;InbreedingCoeff=0.9128;MQ=52.88;MQ0=19;MQRankSum=-3.141;QD=24.40;ReadPosRankSum=-0.033;VQSLOD=4.6357;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:28:44.40:0,44,480	1/1:4,7:11:21.07:295,21,0	./.	0/0:10,0:1:3:0,3,28	1/1:7,3:33:2.04:218,2,0	1/1:7,16:23:41.52:509,42,0	1/1:3,11:14:33.06:440,33,0	0/0:23,0:21:42.01:0,42,388	0/0:12,0:11:30.03:0,30,277	1/1:4,22:26:65.66:848,66,0	1/1:5,11:17:32.35:382,32,0	1/1:4,10:14:33:416,33,0	0/0:11,0:11:11.76:0,12,110	1/1:2,5:9:15.04:197,15,0	1/1:3,5:9:15.05:210,15,0	1/1:4,8:14:24.03:301,24,0	1/1:5,23:32:73.19:918,73,0	1/1:2,9:12:26.45:345,26,0	1/1:6,5:11:15.05:210,15,0	1/1:7,13:21:42.08:538,42,0	1/1:3,7:10:20.56:258,21,0	1/1:4,5:11:20.04:227,20,0	0/0:12,0:12:27:0,27,245	0/0:26,0:28:35.17:0,35,418	1/1:8,14:23:44.07:539,44,0	1/1:6,24:32:74.68:955,75,0	1/1:10,13:25:41.87:575,42,0	1/1:2,15:20:53.66:697,54,0
chr10	64652732	.	AC	A	16409.54	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=13.871;DP=671;FS=0.000;HRun=3;HaplotypeScore=95.5214;InbreedingCoeff=0.9980;MQ=90.78;MQ0=0;MQRankSum=-6.495;QD=33.49;ReadPosRankSum=5.486;VQSLOD=4.6886;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,43:45:99:1338,108,0	1/1:1,12:13:33.10:409,33,0	0/0:23,0:23:61.44:0,61,781	0/0:29,0:29:78.86:0,79,1068	1/1:1,17:18:45.14:557,45,0	1/1:0,13:13:36.11:446,36,0	1/1:3,23:26:63.20:781,63,0	0/0:24,0:24:66.21:0,66,933	0/0:21,0:21:60.17:0,60,826	1/1:0,17:17:51.14:618,51,0	1/1:1,9:10:24.08:297,24,0	1/1:1,31:32:93.29:1143,93,0	0/0:25,0:25:72.21:0,72,983	1/1:0,29:29:78.24:961,78,0	1/1:1,36:37:99:1223,99,0	1/1:0,37:37:99:1263,102,0	1/1:0,31:31:90.28:1115,90,0	1/1:0,30:30:90.28:1115,90,0	1/1:1,17:18:51.14:611,51,0	1/1:0,13:13:33.10:408,33,0	1/1:0,46:46:99:1413,114,0	1/1:0,12:12:36.11:446,36,0	0/0:8,0:8:21.04:0,21,265	0/0:51,0:51:99:0,150,2119	1/1:0,12:12:36.11:446,36,0	1/1:0,18:18:54.17:670,54,0	1/1:1,25:26:72.23:889,72,0	1/1:0,7:7:21.07:260,21,0
chr10	64654999	.	C	CAGGGCCTTGCGCTTGCT	46609.24	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=5.051;DP=617;FS=7.209;HRun=0;HaplotypeScore=249.5486;InbreedingCoeff=0.9914;MQ=46.14;MQ0=2;MQRankSum=-15.020;QD=107.15;ReadPosRankSum=-3.513;VQSLOD=3.1832;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:16,11:31:69.24:3985,69,0	1/1:4,2:7:12.04:682,12,0	0/0:39,0:19:45.14:0,45,1630	0/0:18,0:8:24.08:0,24,926	1/1:26,1:29:54.19:1759,54,0	1/1:13,5:19:48.12:2401,48,0	1/1:6,6:16:30.10:1768,30,0	0/0:25,0:25:69.18:0,69,2446	0/0:25,0:25:75.24:0,75,3424	1/1:18,7:26:65.77:4035,66,0	1/1:15,2:19:33.11:1352,33,0	1/1:24,2:29:72.25:3773,72,0	0/0:25,0:25:72.22:0,72,3058	1/1:17,2:19:45.15:2069,45,0	1/1:19,1:22:51.18:2250,51,0	1/1:22,6:28:71.78:3505,72,0	1/1:10,5:18:33.11:2208,33,0	1/1:8,5:14:33.11:2039,33,0	1/1:11,1:13:27.09:1499,27,0	1/1:20,3:26:51.18:1884,51,0	1/1:11,1:14:20.23:918,20,0	1/1:10,3:17:24.08:1101,24,0	0/0:22,0:22:62.88:0,63,2913	0/0:28,0:28:25.87:0,26,3776	1/1:21,5:27:69.19:3008,69,0	1/1:9,5:18:39.13:2181,39,0	1/1:17,4:22:60.21:3294,60,0	1/1:12,0:12:21.05:898,21,0
chr10	64655761	.	TCAATCCA	T	27509.67	PASS	AB=0.570;AC=38;AF=0.679;AN=56;BaseQRankSum=17.237;DP=677;FS=7.006;HRun=0;HaplotypeScore=183.9352;InbreedingCoeff=0.8139;MQ=42.63;MQ0=10;MQRankSum=-16.764;QD=57.07;ReadPosRankSum=2.019;VQSLOD=4.4533;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,102,3635	1/1:1,4:5:12.04:307,12,0	0/0:11,0:3:9.03:0,9,275	0/0:15,0:8:14.75:0,15,746	1/1:4,21:25:57.07:1230,57,0	1/1:0,24:24:69.15:1626,69,0	0/1:4,17:21:70.33:659,0,70	0/0:45,0:43:99:0,120,4524	0/0:24,0:24:72.20:0,72,2659	1/1:3,31:34:84.24:2028,84,0	1/1:2,22:25:69.24:1634,69,0	1/1:3,32:35:84.29:2101,84,0	0/0:27,0:27:81.28:0,81,3050	1/1:2,25:27:63.22:1611,63,0	1/1:1,23:24:69.24:1730,69,0	1/1:5,33:38:87.30:2139,87,0	0/1:6,14:20:62.86:1029,0,63	1/1:2,13:15:27.05:579,27,0	1/1:5,18:18:48.16:1163,48,0	1/1:5,36:41:99:2168,102,0	1/1:3,6:9:12:172,12,0	1/1:2,15:18:45.15:1079,45,0	0/0:21,0:21:63.20:0,63,2399	0/0:15,0:15:42.14:0,42,1641	1/1:3,35:38:99:2442,99,0	1/1:2,24:26:72.23:1720,72,0	1/1:5,22:27:63.22:1554,63,0	1/1:0,7:7:21.07:538,21,0
chr10	64656571	.	TA	T	5156.25	PASS	AB=0.781;AC=38;AF=0.679;AN=56;BaseQRankSum=4.465;DP=546;FS=3.677;HRun=12;HaplotypeScore=84.5555;InbreedingCoeff=0.6276;MQ=60.59;MQ0=12;MQRankSum=-2.724;QD=13.43;ReadPosRankSum=2.689;VQSLOD=5.3935;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:31:74.41:0,74,681	1/1:1,11:12:35.85:276,36,0	0/0:28,0:12:2.55:0,3,77	0/1:27,0:9:1.81:2,0,59	1/1:15,11:26:2.14:349,2,0	1/1:4,12:16:38.81:301,39,0	1/1:3,6:8:14.93:116,15,0	0/0:16,0:29:42.90:0,43,256	0/0:15,0:15:26.88:0,27,249	1/1:9,7:15:29.81:227,30,0	0/1:13,8:21:40.83:253,0,41	1/1:13,8:21:46.70:334,47,0	0/0:20,0:18:41.37:0,41,363	0/1:7,4:11:11.33:94,0,11	1/1:9,6:15:32.85:255,33,0	1/1:10,8:19:35.94:259,36,0	1/1:17,17:34:13.35:448,13,0	1/1:17,14:30:12.73:423,13,0	1/1:6,7:12:32.61:238,33,0	1/1:15,11:26:50.97:366,51,0	1/1:2,3:4:5.98:46,6,0	1/1:2,2:4:7.79:51,8,0	0/0:24,0:24:53.93:0,54,521	0/0:14,0:14:32.21:0,32,294	0/1:11,11:22:8.58:293,0,9	1/1:14,11:24:35.65:324,36,0	1/1:10,12:21:47.76:364,48,0	1/1:5,2:7:17.91:138,18,0
chr10	64656592	.	CA	C	5196.37	PASS	AB=0.599;AC=37;AF=0.661;AN=56;BaseQRankSum=5.697;DP=565;FS=1.886;HRun=12;HaplotypeScore=86.5560;InbreedingCoeff=0.6764;MQ=58.99;MQ0=16;MQRankSum=-2.301;QD=13.75;ReadPosRankSum=2.840;VQSLOD=5.4179;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:47.56:0,48,626	1/1:5,10:15:35.84:275,36,0	0/0:28,0:10:4.69:0,5,33	0/0:25,0:9:11.08:0,11,56	1/1:8,19:30:30.38:397,30,0	1/1:5,13:18:18.31:253,18,0	1/1:2,11:12:20.76:200,21,0	0/0:33,0:34:66.80:0,67,639	0/0:10,1:12:3.65:0,4,199	1/1:8,15:22:13.59:250,14,0	1/1:6,16:24:31.46:383,31,0	1/1:5,10:16:37.76:275,38,0	0/0:18,0:17:42.53:0,43,418	0/1:4,8:12:8.74:119,0,9	1/1:3,6:10:25.94:191,26,0	0/1:7,12:19:22.19:216,0,22	1/1:10,23:33:9.46:429,9,0	0/1:8,19:27:5.06:321,0,5	1/1:10,11:18:38.82:300,39,0	1/1:7,14:21:13.41:276,13,0	1/1:3,2:3:8.97:70,9,0	1/1:3,5:7:13.99:98,14,0	0/0:18,3:21:18.84:0,19,370	0/0:13,0:13:3.82:0,4,220	1/1:5,14:20:43.83:331,44,0	1/1:11,18:27:32.72:375,33,0	1/1:7,16:22:20.17:299,20,0	1/1:2,7:9:17.93:139,18,0
chr10	64656877	.	CTT	C	20924.12	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=11.322;DP=709;FS=7.657;HRun=2;HaplotypeScore=96.8038;InbreedingCoeff=0.9943;MQ=81.32;MQ0=6;MQRankSum=-6.368;QD=41.68;ReadPosRankSum=8.377;VQSLOD=4.0922;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,50:49:99:1859,114,0	1/1:0,10:10:27.09:440,27,0	0/0:29,0:29:87.25:0,87,1592	0/0:31,0:32:65.45:0,65,1407	1/1:0,23:23:51.17:830,51,0	1/1:0,22:22:60.20:979,60,0	1/1:0,23:23:66.23:1076,66,0	0/0:47,0:47:99:0,141,2758	0/0:32,0:32:50.90:0,51,1813	1/1:0,32:31:90.29:1426,90,0	1/1:0,23:23:54.18:880,54,0	1/1:0,43:41:99:1761,108,0	0/0:21,0:21:63.22:0,63,1278	1/1:0,23:23:63.16:1025,63,0	1/1:0,31:31:72.15:1174,72,0	1/1:0,26:26:69.05:1125,69,0	1/1:1,28:29:14.54:1113,15,0	1/1:0,22:22:51.17:832,51,0	1/1:0,14:14:42.12:637,42,0	1/1:1,11:11:33.11:538,33,0	1/1:0,38:38:99:1762,108,0	1/1:0,10:9:21.07:341,21,0	0/0:15,0:15:42.14:0,42,853	0/0:31,0:31:93.32:0,93,1866	1/1:0,17:16:45.15:733,45,0	1/1:0,24:24:69.24:1122,69,0	1/1:0,23:23:60.15:978,60,0	1/1:0,7:7:18.06:293,18,0
chr10	64657139	.	AT	A	2126.36	PASS	AB=0.797;AC=34;AF=0.607;AN=56;BaseQRankSum=0.583;DP=634;FS=12.630;HRun=16;HaplotypeScore=87.0876;InbreedingCoeff=0.2828;MQ=65.20;MQ0=6;MQRankSum=2.071;QD=5.03;ReadPosRankSum=2.350;VQSLOD=1.1795;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:22:32.48:0,32,192	1/1:3,2:6:7.88:42,8,0	0/0:36,1:18:10.85:0,11,54	0/0:33,0:14:16.66:0,17,100	0/0:33,1:40:25.43:0,25,476	1/1:5,9:15:9.22:160,9,0	0/1:17,7:25:23.19:139,0,23	0/0:28,0:39:52.27:0,52,294	0/0:19,2:21:11.74:0,12,185	1/1:14,16:31:17.83:214,18,0	1/1:13,12:25:26.13:161,26,0	1/1:15,3:19:26.04:131,26,0	0/0:15,0:15:20.02:0,20,180	0/1:18,1:21:5.15:62,0,5	1/1:15,5:20:5.06:98,5,0	1/1:24,6:31:21.90:221,22,0	0/1:12,8:19:12.24:141,0,12	0/1:13,3:14:58.59:59,0,91	1/1:17,7:25:5.76:91,6,0	1/1:14,12:27:5.78:142,6,0	1/1:11,5:19:23.46:125,23,0	0/1:8,7:15:14.54:31,0,15	0/1:12,3:16:21.21:21,0,155	0/1:20,1:20:37.68:38,0,112	1/1:7,7:15:1.93:110,2,0	0/1:17,9:28:11.22:152,0,11	1/1:13,5:19:2.30:100,2,0	1/1:2,4:7:3.42:76,3,0
chr10	64658080	.	C	CAA	6524.81	PASS	AB=0.744;AC=44;AF=0.786;AN=56;BaseQRankSum=-1.358;DP=528;FS=0.000;HRun=15;HaplotypeScore=82.0399;InbreedingCoeff=0.4488;MQ=78.55;MQ0=0;MQRankSum=-0.703;QD=13.74;ReadPosRankSum=-0.836;VQSLOD=3.7298;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,8:18:20.26:199,20,0	1/1:3,3:7:8.39:85,8,0	0/1:20,0:16:0:1,0,0	0/1:9,0:10:3.66:10,0,4	1/1:5,15:23:29.02:511,29,0	1/1:7,10:19:26.98:293,27,0	0/1:4,10:18:19.15:178,0,19	0/1:7,1:22:0.08:107,0,0	0/0:19,0:19:26.08:0,26,212	1/1:6,7:15:29.08:310,29,0	1/1:5,16:24:52.20:553,52,0	1/1:4,15:23:31.28:313,31,0	0/0:15,0:18:35.20:0,35,264	1/1:1,7:9:12.77:126,13,0	1/1:9,14:28:36:327,36,0	1/1:9,11:26:13.44:331,13,0	1/1:3,10:18:31.81:330,32,0	0/1:3,14:17:5.71:172,0,6	1/1:19,3:25:30.86:283,31,0	1/1:7,19:29:42.14:656,42,0	1/1:0,1:1:3.01:38,3,0	1/1:5,11:22:36.57:284,37,0	0/0:12,0:16:19.40:0,19,179	0/1:7,2:10:23.42:23,0,68	1/1:8,14:24:4.49:244,4,0	1/1:10,17:30:33.37:559,33,0	1/1:8,16:24:36.34:412,36,0	1/1:5,4:11:15.93:182,16,0
chr10	64658337	.	A	AATC	26777.79	PASS	AB=0.950;AC=43;AF=0.768;AN=56;BaseQRankSum=-15.098;DP=678;FS=2.530;HRun=0;HaplotypeScore=78.1397;InbreedingCoeff=0.8737;MQ=76.56;MQ0=0;MQRankSum=-3.731;QD=49.87;ReadPosRankSum=5.712;VQSLOD=6.5729;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,49:52:99:2666,120,0	1/1:1,8:10:24.08:507,24,0	0/0:18,0:18:41.95:0,42,620	0/0:19,0:19:51.13:0,51,717	1/1:4,24:29:69.24:1452,69,0	1/1:1,21:22:60.21:1338,60,0	1/1:1,16:17:45.15:1003,45,0	0/0:36,0:35:96.32:0,96,1531	0/0:15,0:15:42.14:0,42,681	1/1:3,27:30:84.29:1861,84,0	1/1:1,12:15:33.11:736,33,0	1/1:1,23:24:54.19:1205,54,0	0/0:22,0:22:60.20:0,60,972	1/1:2,26:30:69.24:1527,69,0	1/1:4,25:30:66.23:1461,66,0	1/1:1,25:26:63.22:1395,63,0	1/1:2,31:33:72.24:1562,72,0	1/1:4,16:21:39.60:850,40,0	1/1:5,10:16:33.06:670,33,0	1/1:2,17:19:57.20:1216,57,0	1/1:1,24:25:60.21:1313,60,0	1/1:6,26:34:84.29:1838,84,0	0/1:18,1:19:12.58:13,0,779	0/0:31,0:31:93.32:0,93,1505	1/1:2,14:16:33.11:737,33,0	1/1:3,24:27:75.26:1638,75,0	1/1:5,28:34:78.27:1723,78,0	1/1:1,5:6:3.01:67,3,0
chr10	64658341	.	A	ATCC	16992.19	PASS	AB=1.000;AC=41;AF=0.732;AN=56;BaseQRankSum=13.825;DP=661;FS=1.870;HRun=0;HaplotypeScore=110.1243;InbreedingCoeff=0.8137;MQ=78.83;MQ0=0;MQRankSum=-7.872;QD=34.05;ReadPosRankSum=9.151;VQSLOD=4.9252;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:52,0:52:59.45:1707,59,0	1/1:10,0:10:2.09:315,2,0	0/0:17,0:18:48.12:0,48,796	0/0:22,0:22:56.59:0,57,833	1/1:28,1:29:69.14:963,69,0	1/1:23,0:23:38.22:887,38,0	1/1:16,1:17:45.15:681,45,0	0/0:35,0:34:99:0,102,1819	0/0:15,0:15:45.14:0,45,784	1/1:28,0:28:84.28:1189,84,0	1/1:15,0:15:11.13:481,11,0	1/1:23,0:23:32.20:763,32,0	0/0:21,0:21:63.20:0,63,1135	1/1:30,0:30:29.08:951,29,0	1/1:26,0:26:24.26:896,24,0	1/1:26,0:26:19.28:848,19,0	1/1:31,0:31:72.13:1019,72,0	1/1:16,1:17:39.60:563,40,0	0/1:14,0:14:65.81:346,0,66	1/1:21,1:22:24.22:787,24,0	1/1:25,0:25:60.20:843,60,0	1/1:34,0:34:18.34:1145,18,0	0/0:18,0:18:4.33:0,4,893	0/0:33,0:33:96.31:0,96,1724	1/1:14,0:14:33.11:479,33,0	1/1:25,0:25:72.24:990,72,0	1/1:32,1:33:34.31:1098,34,0	1/1:5,0:5:3.01:43,3,0
chr10	64662037	.	CTGTGTCT	C	17663.56	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=12.711;DP=505;FS=4.063;HRun=0;HaplotypeScore=123.1242;InbreedingCoeff=0.9642;MQ=65.57;MQ0=1;MQRankSum=-14.803;QD=49.76;ReadPosRankSum=4.007;VQSLOD=4.8421;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,99,3504	1/1:0,2:2:6.02:158,6,0	0/0:17,0:17:47.19:0,47,1447	0/0:18,0:18:51.06:0,51,1620	1/1:0,9:9:21.07:554,21,0	1/1:0,12:12:27.09:726,27,0	1/1:1,26:27:57.20:1526,57,0	0/0:18,0:18:48.14:0,48,1528	0/0:16,0:16:48.14:0,48,1615	1/1:2,15:17:42.12:1019,42,0	1/1:0,8:8:18.06:485,18,0	1/1:3,30:33:63.22:1624,63,0	0/0:8,0:8:24.08:0,24,932	1/1:1,24:25:57.20:1523,57,0	1/1:0,6:6:9.03:242,9,0	1/1:2,14:15:30.10:807,30,0	1/1:4,22:26:39.13:1027,39,0	1/1:3,22:25:39.13:1020,39,0	1/1:1,17:18:51.10:1023,51,0	1/1:0,9:9:23.97:517,24,0	1/1:10,49:59:57:1427,57,0	1/1:2,8:10:21.07:536,21,0	0/0:7,0:7:15.05:0,15,588	0/0:32,0:32:96.33:0,96,3796	1/1:0,16:16:35.92:964,36,0	1/1:2,17:19:48.15:1198,48,0	1/1:1,11:12:33.11:886,33,0	1/1:0,6:6:15.05:404,15,0
chr10	64664169	.	T	TAA	2053.92	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-10.603;DP=641;FS=5.595;HRun=6;HaplotypeScore=70.3069;InbreedingCoeff=0.9971;MQ=69.64;MQ0=0;MQRankSum=0.333;QD=33.13;ReadPosRankSum=-0.654;VQSLOD=3.2707;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,30:32:60.21:1015,60,0	0/0:11,0:11:33.07:0,33,378	0/0:14,0:14:21:0,21,237	0/0:15,0:15:29.43:0,29,324	0/0:22,0:22:57.16:0,57,682	0/0:15,0:15:42.13:0,42,512	0/0:19,0:19:51.14:0,51,609	1/1:4,25:30:75.19:1161,75,0	0/0:24,0:24:69.19:0,69,816	0/0:40,0:40:96.26:0,96,1130	0/0:16,0:16:33.10:0,33,402	0/0:30,0:30:81.22:0,81,963	0/0:26,0:26:72.17:0,72,839	0/0:20,0:20:57.16:0,57,682	0/0:30,0:30:87.22:0,87,1012	0/0:27,0:27:72.22:0,72,878	0/0:23,0:23:66.17:0,66,778	0/0:16,0:16:33.10:0,33,402	0/0:25,0:25:60.16:0,60,719	0/0:32,0:32:78.16:0,78,900	0/0:19,0:19:42.10:0,42,498	0/0:23,0:23:60.16:0,60,717	0/0:25,0:25:69.18:0,69,817	0/0:22,0:22:60.09:0,60,697	0/0:14,0:14:39.12:0,39,476	0/0:30,0:30:84.25:0,84,1003	0/0:27,0:27:69.14:0,69,789	0/0:14,0:14:39.12:0,39,475
chr10	64664339	.	AAAAAACC	A	2583.12	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.016;DP=676;FS=0.000;HRun=0;HaplotypeScore=150.6060;InbreedingCoeff=0.9894;MQ=61.76;MQ0=8;MQRankSum=-5.341;QD=49.68;ReadPosRankSum=-2.683;VQSLOD=2.7261;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,13:21:56.92:1078,57,0	0/0:7,0:7:21.07:0,21,721	0/0:15,0:5:14.84:0,15,435	0/0:31,0:17:41.81:0,42,745	0/0:33,0:33:94.19:0,94,2923	0/0:20,0:20:57.19:0,57,2077	0/0:27,0:27:78.23:0,78,2417	1/1:4,27:31:81.15:1627,81,0	0/0:22,0:22:60.17:0,60,2105	0/0:23,0:23:66.22:0,66,2336	0/0:32,0:32:96.31:0,96,3179	0/0:22,0:22:66.22:0,66,2142	0/0:17,0:17:45.12:0,45,1471	0/0:17,0:17:48.07:0,48,1562	0/0:32,0:32:93.28:0,93,3068	0/0:23,0:23:69.22:0,69,2275	0/0:39,0:39:99:0,110,3174	0/0:22,0:22:51.16:0,51,1604	0/0:25,0:25:66.22:0,66,2018	0/0:29,0:29:81.24:0,81,2660	0/0:22,0:22:62:0,62,1971	0/0:19,0:19:48.02:0,48,1509	0/0:24,0:24:66.22:0,66,2201	0/0:23,0:23:60.18:0,60,1936	0/0:19,0:19:57.14:0,57,1741	0/0:29,0:29:84.24:0,84,2641	0/0:37,0:37:99:0,111,3740	0/0:15,0:15:39.13:0,39,1420
chr10	64664428	.	TA	T	1054.23	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=3.875;DP=651;FS=2.826;HRun=8;HaplotypeScore=72.8728;InbreedingCoeff=0.9942;MQ=61.07;MQ0=1;MQRankSum=-1.628;QD=20.67;ReadPosRankSum=-2.913;VQSLOD=2.8304;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:3,19:22:51.02:481,51,0	0/0:8,0:8:24.06:0,24,278	0/0:17,0:13:30.06:0,30,337	0/0:14,0:11:18.05:0,18,205	0/0:35,0:35:93.26:0,93,1099	0/0:23,0:23:60.16:0,60,703	0/0:16,0:16:45.14:0,45,544	1/1:5,24:29:72.11:695,72,0	0/0:15,0:15:42.13:0,42,507	0/0:37,0:37:99:0,105,1259	0/0:23,0:23:57.17:0,57,679	0/0:23,0:23:60.18:0,60,724	0/0:17,0:17:45.13:0,45,533	0/0:17,0:17:51.14:0,51,603	0/0:26,0:26:66.12:0,66,767	0/0:30,1:31:52.26:0,52,901	0/0:43,0:43:99:0,99,1166	0/0:31,0:31:87.23:0,87,1033	0/0:22,0:21:60.16:0,60,701	0/0:33,0:33:90.26:0,90,1075	0/0:21,0:21:51.12:0,51,576	0/0:21,0:21:54.16:0,54,642	0/0:22,0:22:63.18:0,63,748	0/0:14,0:14:39.11:0,39,459	0/0:16,0:16:48.13:0,48,559	0/0:30,0:30:81.23:0,81,959	0/0:33,0:33:87.24:0,87,1028	0/0:12,0:12:30.09:0,30,355
chr10	64664909	.	A	AC	14870.44	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-15.872;DP=672;FS=12.535;HRun=6;HaplotypeScore=63.2540;InbreedingCoeff=0.9989;MQ=68.68;MQ0=0;MQRankSum=0.575;QD=32.75;ReadPosRankSum=2.837;VQSLOD=4.4041;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,111,1115	1/1:0,9:9:21.07:264,21,0	0/0:25,0:25:45.96:0,46,471	0/0:22,0:22:60.12:0,60,601	1/1:1,15:16:42.13:528,42,0	1/1:0,25:25:66.21:830,66,0	1/1:4,21:25:63.20:793,63,0	0/0:35,0:35:96.21:0,96,979	0/0:22,0:22:51.09:0,51,513	1/1:0,21:21:60.19:754,60,0	1/1:2,17:19:51.16:640,51,0	1/1:1,15:16:48.15:603,48,0	0/0:26,0:26:75.14:0,75,752	1/1:1,15:16:42.13:528,42,0	1/1:3,27:30:78.25:981,78,0	1/1:2,28:30:81.26:1019,81,0	1/1:2,34:36:99:1282,102,0	1/1:2,28:30:78.25:981,78,0	1/1:4,22:26:63.18:766,63,0	1/1:3,19:22:54.13:655,54,0	1/1:2,33:35:93.30:1169,93,0	1/1:3,20:23:51.16:641,51,0	0/0:13,0:13:30.07:0,30,306	0/0:25,0:25:60.11:0,60,604	1/1:1,14:15:39.12:491,39,0	1/1:1,21:22:63.18:777,63,0	1/1:4,25:29:69.22:865,69,0	1/1:1,8:9:24.08:302,24,0
chr10	64667666	.	CAA	C	7500.59	PASS	AB=0.866;AC=25;AF=0.446;AN=56;BaseQRankSum=17.247;DP=1516;FS=29.611;HRun=3;HaplotypeScore=469.6844;InbreedingCoeff=-0.7997;MQ=39.12;MQ0=28;MQRankSum=-9.292;QD=5.53;ReadPosRankSum=5.750;VQSLOD=0.1794;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:38,4:41:56.35:56,0,1444	0/1:16,3:19:99:164,0,252	0/0:59,1:11:23.21:0,23,362	0/0:49,1:13:4.34:0,4,304	0/1:34,11:45:99:205,0,468	0/1:25,5:30:99:144,0,718	0/1:36,17:49:99:479,0,1271	0/1:114,6:88:99:221,0,1839	0/1:36,4:39:99:130,0,1194	0/1:71,26:85:99:997,0,1895	0/1:35,6:41:99:189,0,502	0/1:66,7:73:99:167,0,2136	0/1:30,14:43:99:489,0,900	0/1:40,5:42:99:225,0,1194	0/1:53,16:65:99:414,0,1778	0/1:68,12:78:99:468,0,2191	0/1:33,2:33:3.75:4,0,924	0/1:36,1:38:39.91:40,0,1123	0/1:32,3:24:99:131,0,605	0/1:48,12:59:99:388,0,1187	0/1:82,16:94:99:125,0,2574	0/1:46,11:57:99:490,0,813	0/1:36,6:42:99:302,0,613	0/0:47,2:47:54.92:0,55,1238	0/1:47,11:56:99:462,0,886	0/1:55,20:71:99:869,0,1676	0/1:38,11:45:99:333,0,1464	0/1:11,0:9:9.91:10,0,316
chr10	64667876	.	A	AAC	1247.75	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.647;DP=1352;FS=3.659;HRun=0;HaplotypeScore=225.3094;InbreedingCoeff=0.8865;MQ=48.63;MQ0=61;MQRankSum=0.176;QD=24.47;ReadPosRankSum=0.080;VQSLOD=3.9059;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:47,4:50:99:1343,103,0	0/0:12,0:12:23.95:0,24,264	0/0:29,0:12:14.94:0,15,134	0/0:30,0:6:5.78:0,6,48	0/0:35,0:33:47.19:0,47,491	0/0:32,0:30:81.51:0,82,917	0/0:56,0:53:99:0,121,1388	0/0:75,0:59:87.50:0,88,1058	0/0:35,0:34:77.92:0,78,903	0/0:62,0:53:99:0,107,1341	0/0:31,0:29:62.95:0,63,666	0/0:94,0:89:99:0,165,1907	0/0:32,0:31:78.21:0,78,944	0/0:48,0:46:99:0,108,1246	0/0:77,0:72:99:0,111,1263	0/0:75,0:73:99:0,177,2099	0/0:55,0:51:99:0,106,1162	0/0:58,0:55:99:0,122,1373	0/0:37,0:24:59.85:0,60,639	0/0:41,0:40:92.86:0,93,962	0/0:133,1:123:99:0,222,2691	0/0:41,0:37:89.39:0,89,915	0/0:27,0:27:41.86:0,42,501	0/0:39,0:38:93.22:0,93,1136	0/0:35,0:33:68.40:0,68,707	0/0:51,0:47:99:0,108,1275	0/0:38,0:37:70.68:0,71,842	0/0:21,0:17:36.54:0,37,408
chr10	64667880	.	CACACACAA	C	1602.14	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=9.205;DP=1334;FS=5.378;HRun=0;HaplotypeScore=344.1255;InbreedingCoeff=0.8214;MQ=48.57;MQ0=58;MQRankSum=-2.177;QD=30.81;ReadPosRankSum=-0.330;VQSLOD=2.2736;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:42,10:51:99:1697,127,0	0/0:10,0:10:26.93:0,27,504	0/0:25,0:9:8.12:0,8,93	0/0:25,0:4:4.59:0,5,55	0/0:36,0:34:47.49:0,47,827	0/0:32,0:30:80.95:0,81,1601	0/0:56,0:53:99:0,120,2276	0/0:78,0:59:94.73:0,95,857	0/0:35,0:34:80.81:0,81,1614	0/0:66,0:57:99:0,115,2028	0/0:30,0:28:58.69:0,59,1024	0/0:90,0:85:99:0,176,3568	0/0:35,0:34:89.61:0,90,1966	0/0:49,0:46:99:0,109,2166	0/0:73,0:68:99:0,106,1881	0/0:78,0:76:99:0,165,3453	0/0:52,0:48:97.38:0,97,2416	0/0:55,0:53:92.81:0,93,2678	0/0:39,0:26:68.60:0,69,1118	0/0:42,0:41:99:0,101,1638	0/0:130,0:119:99:0,247,5163	0/0:42,0:38:88.38:0,88,1975	0/0:25,0:25:58.40:0,58,1035	0/0:37,0:36:93.20:0,93,2442	0/0:31,0:29:68.69:0,69,1528	0/0:52,0:48:99:0,103,2279	0/0:37,0:36:68.30:0,68,1247	0/0:20,0:16:17.16:0,17,635
chr10	64667886	.	CAA	C	611.13	PASS	AB=1.000;AC=4;AF=0.071;AN=56;BaseQRankSum=10.222;DP=1276;FS=4.974;HRun=3;HaplotypeScore=217.3303;InbreedingCoeff=0.4588;MQ=48.64;MQ0=56;MQRankSum=1.075;QD=6.30;ReadPosRankSum=-1.131;VQSLOD=-0.5091;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:48,5:53:99:702,110,0	0/0:11,0:11:13.96:0,14,297	0/0:21,0:7:8.01:0,8,76	0/1:18,0:3:0.86:1,0,33	0/0:35,0:33:46.92:0,47,516	0/0:31,0:29:44.26:0,44,798	0/0:56,0:53:99:0,107,1551	0/0:73,0:56:7.26:0,7,633	0/0:36,0:35:68.55:0,69,1087	0/0:63,0:53:90.95:0,91,1267	0/0:32,0:30:43.29:0,43,789	0/0:85,0:80:99:0,150,2100	0/0:36,0:34:51.04:0,51,1185	0/0:44,0:41:95.77:0,96,1317	0/0:75,0:70:78.61:0,79,1198	0/0:75,0:73:99:0,145,2018	0/0:47,0:43:72.69:0,73,1315	0/0:53,0:50:84.52:0,85,1463	0/0:36,0:27:45.29:0,45,691	0/0:41,0:40:56.47:0,56,941	0/0:121,0:109:99:0,179,3093	0/0:40,0:36:72.12:0,72,1129	0/1:26,0:26:10.86:11,0,598	0/0:36,0:34:49.98:0,50,1151	0/0:29,0:27:71.69:0,72,972	0/0:50,0:46:99:0,102,1396	0/0:33,0:32:61.64:0,62,889	0/0:17,0:14:5.69:0,6,402
chr10	64668308	.	T	TA	5855.45	PASS	AB=0.814;AC=40;AF=0.741;AN=54;BaseQRankSum=-4.718;DP=427;FS=4.214;HRun=12;HaplotypeScore=45.8307;InbreedingCoeff=0.7482;MQ=65.34;MQ0=2;MQRankSum=0.461;QD=17.02;ReadPosRankSum=2.201;VQSLOD=6.0202;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:21:28.41:142,28,0	1/1:1,9:11:29.88:277,30,0	0/0:16,0:9:5.12:0,5,25	0/1:13,0:8:13.69:14,0,15	1/1:6,19:25:10.21:406,10,0	1/1:4,16:21:50.92:481,51,0	1/1:1,6:7:18.03:175,18,0	0/0:30,0:30:39.94:0,40,415	0/0:5,0:5:14.91:0,15,108	1/1:5,16:22:27.25:404,27,0	1/1:4,14:19:41.90:392,42,0	1/1:2,10:12:21.03:204,21,0	0/0:14,0:14:29.75:0,30,214	1/1:0,5:5:6:53,6,0	1/1:2,17:19:36.06:350,36,0	1/1:0,10:10:24.04:234,24,0	0/1:11,15:27:36.36:261,0,36	1/1:3,7:10:24.35:219,24,0	1/1:5,11:17:13.98:284,14,0	1/1:4,12:16:32.96:301,33,0	1/1:0,6:6:15.02:146,15,0	./.	0/0:9,0:9:20.86:0,21,151	0/0:8,0:8:17.87:0,18,131	1/1:6,22:28:60.10:584,60,0	1/1:2,17:19:51.08:492,51,0	1/1:10,13:23:24.04:232,24,0	1/1:5,6:13:23.71:203,24,0
chr10	64669086	.	CCTCTCT	C	4461.24	PASS	AB=0.923;AC=33;AF=0.611;AN=54;BaseQRankSum=1.813;DP=563;FS=4.097;HRun=0;HaplotypeScore=177.5695;InbreedingCoeff=0.2627;MQ=53.91;MQ0=18;MQRankSum=2.760;QD=13.04;ReadPosRankSum=6.088;VQSLOD=3.8307;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:44.82:0,45,588	1/1:6,0:6:8.73:85,9,0	./.	0/0:55,0:18:12.02:0,12,150	1/1:21,0:21:1.70:157,2,0	1/1:7,6:13:3.01:53,3,0	1/1:8,8:14:3.01:50,3,0	0/0:34,0:33:28.60:0,29,411	0/0:18,0:18:39.11:0,39,914	0/1:20,1:21:13.17:461,0,13	0/1:12,3:15:5.45:55,0,5	0/1:16,1:17:0.73:185,0,1	0/0:16,0:16:33.06:0,33,894	1/1:19,0:19:2.87:200,3,0	0/1:17,0:17:17.41:195,0,17	0/1:23,1:25:8.40:377,0,8	1/1:12,1:13:26.87:446,27,0	1/1:11,1:12:23.87:422,24,0	1/1:17,0:16:6.73:132,7,0	1/1:15,3:19:0.04:253,0,0	1/1:13,2:15:6.02:122,6,0	1/1:19,1:20:4.34:196,4,0	0/0:15,0:15:7.43:0,7,472	0/0:17,0:17:5.89:0,6,519	1/1:15,2:16:6.38:276,6,0	1/1:19,2:19:3.47:339,3,0	0/1:18,3:20:33.18:378,0,33	0/1:14,0:13:29.11:80,0,29
chr10	64669151	.	G	GTA	2720.73	PASS	AB=0.863;AC=24;AF=0.429;AN=56;BaseQRankSum=-1.465;DP=648;FS=26.550;HRun=0;HaplotypeScore=152.1173;InbreedingCoeff=0.0656;MQ=53.09;MQ0=12;MQRankSum=1.094;QD=6.80;ReadPosRankSum=3.834;VQSLOD=1.1429;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:50:35.19:0,35,342	1/1:3,10:13:1.44:33,1,0	0/0:20,0:10:20.11:0,20,217	0/0:21,0:11:32.86:0,33,309	0/0:11,12:24:2.98:0,3,22	1/1:21,0:20:29.92:313,30,0	1/1:19,0:17:6.46:50,6,0	0/0:14,0:14:41.68:0,42,333	0/0:23,0:23:50.95:0,51,521	0/1:10,9:20:99:210,0,131	1/1:28,0:28:17.33:169,17,0	0/1:21,0:21:13.65:198,0,14	0/0:26,0:26:63.75:0,64,595	0/1:32,0:32:62.65:172,0,63	1/1:24,0:24:5.70:188,6,0	0/1:15,3:32:58.56:59,0,93	0/1:26,0:26:23.06:300,0,23	0/1:6,14:19:33.90:34,0,50	0/1:25,0:25:86.35:280,0,86	0/1:18,0:30:16.90:17,0,97	1/1:11,1:12:14.71:162,15,0	0/0:17,0:28:5.89:0,6,37	0/0:16,0:16:35.93:0,36,384	0/0:24,0:23:42.02:0,42,453	0/1:16,1:17:5.66:89,0,6	0/1:28,0:27:99:336,0,193	0/1:20,1:21:42.55:181,0,43	0/1:7,1:8:3.87:109,0,4
chr10	64671202	.	T	TG	1015.36	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=8.178;DP=618;FS=5.984;HRun=2;HaplotypeScore=61.0876;InbreedingCoeff=0.8186;MQ=76.76;MQ0=0;MQRankSum=-1.515;QD=32.75;ReadPosRankSum=2.561;VQSLOD=3.5698;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,26:31:85.39:1110,85,0	0/0:7,0:7:18.06:0,18,222	0/0:14,0:14:36.11:0,36,437	0/0:19,0:19:53.78:0,54,607	0/0:14,0:14:36.11:0,36,446	0/0:30,0:30:81.24:0,81,991	0/0:24,0:24:66.21:0,66,816	0/0:32,0:32:87.27:0,87,1078	0/0:22,0:22:63.20:0,63,780	0/0:16,0:16:45.11:0,45,541	0/0:9,0:9:24.03:0,24,280	0/0:26,0:26:72.23:0,72,892	0/0:25,0:25:75.21:0,75,914	0/0:34,0:34:99:0,99,1195	0/0:36,0:36:99:0,99,1227	0/0:31,0:31:84.26:0,84,1041	0/0:40,0:40:99:0,111,1359	0/0:18,0:18:54.14:0,54,654	0/0:20,0:20:60.18:0,60,731	0/0:5,0:5:12.02:0,12,136	0/0:48,0:48:99:0,132,1631	0/0:15,0:15:45.14:0,45,557	0/0:20,0:20:51.16:0,51,631	0/0:29,0:29:78.23:0,78,952	0/0:7,0:7:21.06:0,21,253	0/0:18,0:18:51.15:0,51,621	0/0:27,0:27:78.24:0,78,966	0/0:1,0:1:3.01:0,3,37
chr10	64675035	.	TA	T	11411.68	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=14.349;DP=455;FS=5.661;HRun=1;HaplotypeScore=77.4462;InbreedingCoeff=0.9976;MQ=90.38;MQ0=0;MQRankSum=-3.783;QD=38.55;ReadPosRankSum=6.888;VQSLOD=4.8261;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:66.19:0,66,1002	1/1:0,9:9:27.09:377,27,0	0/0:22,0:22:59.40:0,59,998	0/0:13,0:13:39.05:0,39,583	0/0:23,0:23:63.21:0,63,1004	1/1:0,18:18:45.15:629,45,0	1/1:0,21:21:57.19:797,57,0	0/0:36,0:36:99:0,108,1623	0/0:7,0:7:21.07:0,21,333	1/1:0,21:21:60.18:805,60,0	1/1:3,12:15:36.12:501,36,0	1/1:0,9:9:27.09:377,27,0	0/0:8,0:8:24.08:0,24,383	1/1:0,16:16:48.16:671,48,0	1/1:0,19:19:57.19:797,57,0	1/1:0,20:20:57.19:797,57,0	1/1:0,24:24:66.22:922,66,0	1/1:0,14:14:36.12:503,36,0	1/1:0,13:13:39.08:505,39,0	1/1:0,12:12:30.06:397,30,0	1/1:0,17:16:48.16:671,48,0	1/1:0,11:11:30.10:416,30,0	0/0:9,0:9:27.06:0,27,381	0/0:18,0:18:54.13:0,54,809	1/1:0,11:11:30.10:419,30,0	1/1:0,21:21:63.14:822,63,0	1/1:0,18:18:51.17:712,51,0	1/1:0,7:7:21.07:294,21,0
chr10	64676256	.	A	ACTT	18801.52	PASS	AB=1.000;AC=45;AF=0.804;AN=56;BaseQRankSum=-10.417;DP=663;FS=0.951;HRun=0;HaplotypeScore=76.3355;InbreedingCoeff=0.8842;MQ=64.40;MQ0=0;MQRankSum=-2.068;QD=33.40;ReadPosRankSum=1.215;VQSLOD=4.8448;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,23:34:48.16:969,48,0	1/1:1,9:10:24.04:444,24,0	0/1:19,0:16:18.94:19,0,202	0/0:18,0:16:26.72:0,27,269	1/1:6,23:32:74.99:1240,75,0	1/1:8,14:23:33.11:666,33,0	1/1:9,18:27:45.12:777,45,0	1/1:11,20:31:60.11:916,60,0	0/0:18,0:18:45.14:0,45,634	1/1:2,23:25:66.14:1120,66,0	1/1:8,14:22:32.87:534,33,0	1/1:3,23:27:51.16:988,51,0	0/0:25,0:25:54.13:0,54,725	1/1:5,14:19:30.10:594,30,0	1/1:4,22:28:33.11:666,33,0	1/1:10,18:28:51.15:961,51,0	1/1:3,8:11:18.06:363,18,0	1/1:3,25:28:57.20:1148,57,0	1/1:6,11:17:35.99:475,36,0	1/1:5,24:31:63.05:1137,63,0	1/1:5,16:21:36.12:727,36,0	1/1:9,18:27:45.02:818,45,0	0/0:21,0:21:51.13:0,51,736	0/0:18,0:18:42.09:0,42,537	1/1:5,21:26:51.15:961,51,0	1/1:4,26:33:84.23:1529,84,0	1/1:4,28:33:69.23:1386,69,0	1/1:1,10:11:18.06:363,18,0
chr10	64676267	.	T	TTC	8508.21	PASS	AB=0.988;AC=29;AF=0.518;AN=56;BaseQRankSum=8.081;DP=646;FS=2.794;HRun=0;HaplotypeScore=102.6317;InbreedingCoeff=-0.1899;MQ=63.34;MQ0=0;MQRankSum=-3.413;QD=15.61;ReadPosRankSum=11.451;VQSLOD=3.4042;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:26:29.38:400,0,29	1/1:9,0:9:11.76:188,12,0	0/1:16,0:13:1.80:2,0,349	0/0:20,0:17:16.94:0,17,300	0/1:32,2:34:61.54:565,0,62	0/1:19,0:19:74.69:269,0,75	1/1:22,3:25:16.47:483,16,0	0/1:31,0:31:99:436,0,223	0/0:19,0:19:54.16:0,54,742	0/1:35,0:35:99:531,0,112	0/1:16,0:16:9.84:225,0,10	0/1:27,1:28:6.21:459,0,6	0/0:22,0:22:63.14:0,63,822	0/1:18,0:19:50.34:270,0,50	0/1:30,0:30:99:263,0,139	0/1:24,2:26:60.16:488,0,60	0/1:13,0:13:99:138,0,110	1/1:28,0:28:12.09:511,12,0	0/1:17,0:17:99:236,0,113	0/1:30,0:30:99:491,0,105	1/1:16,0:16:7.42:311,7,0	0/1:24,0:24:99:332,0,109	0/0:22,0:22:57.14:0,57,809	0/0:18,0:18:51.09:0,51,663	1/1:23,2:25:22.44:499,22,0	0/1:34,0:34:67.06:659,0,67	0/1:35,0:35:67.43:581,0,67	1/1:9,0:9:18.03:171,18,0
chr10	64676857	.	T	TA	619.03	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-3.915;DP=720;FS=10.809;HRun=3;HaplotypeScore=62.7067;InbreedingCoeff=0.9499;MQ=56.37;MQ0=58;MQRankSum=-4.551;QD=17.20;ReadPosRankSum=-3.163;VQSLOD=1.8003;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:46:99:0,129,1544	0/0:4,0:4:12.04:0,12,144	0/0:25,0:8:22.31:0,22,254	0/0:23,0:6:15.05:0,15,180	0/0:19,0:19:54.17:0,54,648	0/0:14,0:14:42.13:0,42,504	0/0:28,0:27:63.19:0,63,754	1/1:7,29:19:51.17:714,51,0	0/0:24,0:24:66.19:0,66,775	0/0:26,0:26:75.23:0,75,900	0/0:13,0:13:36.11:0,36,432	0/0:22,0:22:66.20:0,66,792	0/0:30,0:29:84.26:0,84,1008	0/0:34,0:34:90.27:0,90,1080	0/0:34,0:34:93.28:0,93,1116	0/0:46,0:46:99:0,135,1618	0/0:32,0:32:90.28:0,90,1080	0/0:23,0:23:66.13:0,66,759	0/0:15,0:8:24.07:0,24,288	0/0:20,0:20:54.16:0,54,648	0/0:42,0:42:99:0,123,1475	0/0:19,0:19:54.17:0,54,648	0/0:20,0:19:51.16:0,51,611	0/0:27,0:27:78.24:0,78,935	0/0:16,0:16:42.13:0,42,504	0/0:37,0:37:99:0,108,1296	0/0:32,0:32:87.25:0,87,1031	0/0:11,0:11:27.08:0,27,324
chr10	64678449	.	C	CA	403.56	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=0.803;DP=627;FS=0.000;HRun=9;HaplotypeScore=83.0503;InbreedingCoeff=0.7069;MQ=61.84;MQ0=2;MQRankSum=0.657;QD=7.76;ReadPosRankSum=-1.779;VQSLOD=1.3841;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,105,912	0/0:5,0:5:12:0,12,104	0/0:24,0:10:17.86:0,18,148	0/1:31,0:18:3.45:3,0,157	1/1:6,15:21:25.07:497,25,0	0/0:15,0:15:35.98:0,36,312	0/0:22,0:22:53.95:0,54,463	0/0:27,0:26:71.98:0,72,624	0/0:30,0:30:71.94:0,72,621	0/0:25,0:25:62.98:0,63,547	0/0:12,0:12:32.99:0,33,287	0/0:35,0:35:98.96:0,99,855	0/0:20,0:21:53.02:0,53,448	0/0:21,0:21:38.75:0,39,338	0/0:29,0:28:77.98:0,78,677	0/0:20,0:20:56.98:0,57,495	0/0:31,0:31:80.98:0,81,701	0/0:15,0:15:41.96:0,42,360	0/0:15,0:14:32.90:0,33,276	0/0:15,0:15:32.97:0,33,286	0/0:16,0:16:38.97:0,39,338	0/0:15,0:15:38.98:0,39,339	0/0:17,0:17:41.99:0,42,365	0/0:27,0:27:68.98:0,69,598	0/0:13,0:13:35.98:0,36,312	0/0:33,0:33:80.95:0,81,703	0/0:30,0:31:86:0,86,730	0/0:20,0:20:38.97:0,39,338
chr10	64678544	.	G	GCCTACATAGTGAGTTCCAGGTTAGCCAGGGC	59253.48	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=5.613;DP=618;FS=1.211;HRun=0;HaplotypeScore=356.7682;InbreedingCoeff=0.9403;MQ=63.51;MQ0=0;MQRankSum=-15.627;QD=126.88;ReadPosRankSum=0.611;VQSLOD=3.7416;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,99,6531	1/1:7,0:12:36.12:2979,36,0	0/0:19,0:19:54.10:0,54,1890	0/0:20,0:19:47.57:0,48,1772	1/1:9,0:14:27.55:1838,28,0	1/1:2,0:25:9.03:684,9,0	1/1:31,0:36:96.09:4943,96,0	1/1:21,0:38:99:6899,111,0	0/0:23,0:23:60.19:0,60,4240	1/1:9,0:15:45.15:2440,45,0	1/1:0,0:17:3.01:373,3,0	1/1:3,0:34:28.07:2534,28,0	0/0:18,0:18:54.19:0,54,3757	1/1:21,0:34:84.19:6313,84,0	1/1:6,0:26:24.88:1632,25,0	1/1:3,0:24:9.03:733,9,0	1/1:15,0:19:48.15:4540,48,0	1/1:9,0:14:39.13:3234,39,0	1/1:12,0:18:51.14:2791,51,0	1/1:5,0:16:12.04:731,12,0	1/1:18,0:26:35.87:2360,36,0	1/1:5,0:13:27.09:2148,27,0	0/0:12,0:12:33.11:0,33,1816	0/0:25,0:25:75.19:0,75,3818	1/1:8,0:20:60.21:4840,60,0	1/1:4,0:23:54.17:4169,54,0	1/1:7,0:27:22.32:1368,22,0	1/1:3,1:13:18.06:1704,18,0
chr10	64678556	.	AC	A	276.93	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.358;DP=475;FS=2.614;HRun=3;HaplotypeScore=114.7957;InbreedingCoeff=0.9071;MQ=77.33;MQ0=0;MQRankSum=-1.265;QD=25.18;ReadPosRankSum=-1.053;VQSLOD=2.7353;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:84.24:0,84,1168	0/0:8,0:8:24.08:0,24,345	0/0:18,0:18:48.16:0,48,679	0/0:18,1:19:40.20:0,40,647	1/1:0,11:11:30.09:371,30,0	0/0:16,0:16:21.07:0,21,302	0/0:19,0:19:54.18:0,54,775	0/0:33,0:33:99:0,99,1346	0/0:22,0:22:66.20:0,66,907	0/0:18,0:18:54.18:0,54,762	0/0:11,0:11:12.04:0,12,173	0/0:18,0:18:30.10:0,30,431	0/0:19,0:19:57.18:0,57,801	0/0:23,0:23:60.20:0,60,861	0/0:17,0:17:33.11:0,33,474	0/0:12,0:12:9.03:0,9,129	0/0:12,0:12:30.06:0,30,408	0/0:9,0:9:27.09:0,27,388	0/0:8,0:8:24.08:0,24,345	0/0:16,0:16:30.10:0,30,430	0/0:16,0:16:36.58:0,37,498	0/0:12,0:12:30.10:0,30,431	0/0:12,0:12:33.11:0,33,474	0/0:24,0:24:69.15:0,69,947	0/0:14,0:14:42.14:0,42,603	0/0:25,0:25:70.08:0,70,931	0/0:21,0:18:42.12:0,42,580	0/0:10,0:10:27.09:0,27,388
chr10	64679525	.	A	AT	9144.81	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-6.390;DP=453;FS=7.837;HRun=8;HaplotypeScore=50.2186;InbreedingCoeff=0.9764;MQ=68.81;MQ0=0;MQRankSum=-0.720;QD=28.58;ReadPosRankSum=1.441;VQSLOD=5.2325;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:81.01:0,81,735	1/1:0,10:10:26.99:295,27,0	0/0:5,0:4:11.91:0,12,98	0/0:17,0:16:14.22:0,14,236	1/1:2,14:16:36.11:414,36,0	1/1:4,15:19:45.13:519,45,0	1/1:0,12:12:36.11:415,36,0	0/0:35,0:35:83.94:0,84,744	0/0:11,0:11:27.01:0,27,247	1/1:0,14:14:42.09:463,42,0	1/1:1,11:12:33.01:363,33,0	1/1:1,16:17:42.12:484,42,0	0/0:15,0:15:36:0,36,329	1/1:2,11:13:33.10:381,33,0	1/1:4,13:17:30.09:346,30,0	1/1:2,6:8:15.04:173,15,0	1/1:3,25:28:77.90:876,78,0	1/1:2,24:26:63.19:727,63,0	1/1:1,16:17:51.14:578,51,0	1/1:4,14:18:39.11:448,39,0	1/1:0,7:7:21.06:242,21,0	1/1:3,3:6:8.98:89,9,0	0/0:10,0:10:21:0,21,192	0/0:9,0:9:20.98:0,21,185	1/1:1,21:22:54.16:623,54,0	1/1:2,13:16:38.90:428,39,0	1/1:0,16:16:42.12:485,42,0	1/1:2,24:26:69.20:795,69,0
chr10	64682527	.	A	AAT	2292.50	PASS	AB=0.877;AC=30;AF=0.714;AN=42;BaseQRankSum=-3.944;DP=209;FS=0.000;HRun=0;HaplotypeScore=34.7683;InbreedingCoeff=0.1360;MQ=74.64;MQ0=6;MQRankSum=1.155;QD=14.60;ReadPosRankSum=3.525;VQSLOD=3.0994;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:6,1:7:29.73:42,0,30	1/1:2,0:2:3:25,3,0	1/1:12,0:3:0.08:1,0,0	0/1:26,0:14:21.01:21,0,50	./.	0/1:10,2:12:76.35:76,0,126	1/1:0,1:1:3.01:48,3,0	0/0:30,1:29:9.36:0,9,569	0/0:3,0:3:6.02:0,6,72	1/1:2,1:3:3.01:48,3,0	./.	1/1:2,0:3:3.01:46,3,0	0/0:4,0:4:3.01:0,3,36	1/1:0,1:1:3.01:48,3,0	1/1:2,1:3:3.01:48,3,0	0/0:5,0:5:3.01:0,3,36	1/1:10,13:22:0.39:479,0,0	1/1:5,17:22:39.13:603,39,0	0/1:5,2:7:23.58:131,0,24	./.	./.	./.	./.	./.	1/1:2,2:3:6.02:95,6,0	1/1:1,2:2:6.02:91,6,0	1/1:5,3:8:9.03:143,9,0	1/1:6,14:20:29.70:477,30,0
chr10	64684070	.	GGGA	G	158.03	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=1.553;DP=330;FS=22.284;HRun=0;HaplotypeScore=67.1416;InbreedingCoeff=0.5529;MQ=88.21;MQ0=0;MQRankSum=1.609;QD=12.16;ReadPosRankSum=-2.830;VQSLOD=1.1181;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:51.16:0,51,1031	0/0:2,0:2:3:0,3,32	0/0:44,0:33:71.43:0,71,1229	0/0:22,0:18:22.48:0,22,408	0/0:9,0:9:27.09:0,27,527	0/0:6,0:6:15.04:0,15,202	0/0:20,0:20:39.57:0,40,514	1/1:5,8:13:18.03:248,18,0	0/0:19,0:19:57.11:0,57,966	0/0:6,0:6:18.05:0,18,219	0/0:5,0:5:15.04:0,15,186	0/0:11,0:11:15.04:0,15,225	0/0:16,0:16:45.14:0,45,846	0/0:13,0:13:30.09:0,30,383	0/0:18,0:18:46.65:0,47,571	0/0:8,0:8:7.04:0,7,117	0/0:14,0:14:36.10:0,36,467	0/0:6,0:6:6.01:0,6,91	0/0:9,0:9:21.05:0,21,283	0/0:6,0:6:15.03:0,15,174	0/0:14,0:14:33.09:0,33,450	0/0:9,0:9:24.06:0,24,308	0/0:10,0:10:30.10:0,30,553	0/0:14,0:14:42.11:0,42,790	0/0:4,0:4:12.04:0,12,157	0/0:3,0:3:9.03:0,9,143	0/0:8,0:8:12.04:0,12,183	0/0:1,0:1:2.97:0,3,20
chr10	64684073	.	A	AG	3044.86	PASS	AB=1.000;AC=39;AF=0.696;AN=56;BaseQRankSum=-5.664;DP=340;FS=0.502;HRun=8;HaplotypeScore=47.9436;InbreedingCoeff=0.7292;MQ=89.69;MQ0=0;MQRankSum=-2.298;QD=15.54;ReadPosRankSum=1.939;VQSLOD=3.2700;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:48.03:0,48,439	1/1:3,0:3:2.99:24,3,0	0/0:44,0:33:54.40:0,54,511	0/1:26,0:20:6.54:7,0,146	0/0:10,0:10:26.99:0,27,242	1/1:1,5:6:18.04:199,18,0	1/1:5,14:20:26.80:279,27,0	0/0:11,0:11:6.98:0,7,19	0/0:20,0:20:42.45:0,42,376	1/1:2,4:6:12.04:139,12,0	1/1:1,4:5:12.04:138,12,0	1/1:4,8:12:9.03:104,9,0	0/0:15,0:15:5.79:0,6,285	1/1:1,15:16:27.08:312,27,0	1/1:9,8:17:8.94:331,9,0	1/1:1,8:9:9.91:106,10,0	1/1:1,14:15:33.10:380,33,0	1/1:1,2:3:3.01:35,3,0	1/1:1,5:6:15.04:173,15,0	1/1:3,3:6:15.01:151,15,0	1/1:2,12:14:2.62:284,3,0	1/1:1,7:8:21.06:242,21,0	0/0:10,0:10:29.69:0,30,257	0/0:15,0:15:39.02:0,39,356	1/1:0,10:10:12.04:138,12,0	1/1:1,2:3:6.02:69,6,0	1/1:1,8:9:9.03:104,9,0	1/1:2,0:2:3.88:26,4,0
chr10	64684406	.	A	AT	8666.63	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-11.726;DP=501;FS=1.227;HRun=9;HaplotypeScore=46.6834;InbreedingCoeff=0.9146;MQ=77.16;MQ0=1;MQRankSum=-1.577;QD=25.64;ReadPosRankSum=1.840;VQSLOD=5.4227;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:83.97:0,84,729	1/1:0,3:3:9.02:100,9,0	0/0:11,0:11:26.99:0,27,234	0/0:19,0:18:35.68:0,36,290	0/0:12,0:12:35.98:0,36,309	1/1:2,22:24:57.15:630,57,0	1/1:4,9:13:4.03:273,4,0	0/0:24,0:24:44.92:0,45,387	0/0:17,0:17:41.97:0,42,365	1/1:0,14:16:44.95:473,45,0	1/1:2,16:18:25.01:460,25,0	1/1:5,17:23:36.94:612,37,0	0/0:19,0:20:59:0,59,495	1/1:3,17:20:51.14:562,51,0	1/1:8,11:18:2.26:242,2,0	1/1:1,14:15:36.10:398,36,0	1/1:3,24:27:69.19:763,69,0	1/1:3,21:24:14.08:611,14,0	1/1:6,13:19:16.38:397,16,0	1/1:1,8:9:15.04:166,15,0	1/1:2,16:18:36.10:398,36,0	1/1:2,12:14:36.10:398,36,0	0/0:13,1:15:7.84:0,8,285	0/0:15,0:15:12.44:0,12,328	1/1:1,14:15:33.09:365,33,0	1/1:0,27:27:81.18:874,81,0	1/1:3,21:25:60.03:645,60,0	1/1:0,9:9:27.07:299,27,0
chr10	64685190	.	C	CT	4510.32	PASS	AB=1.000;AC=41;AF=0.732;AN=56;BaseQRankSum=7.315;DP=596;FS=0.000;HRun=13;HaplotypeScore=97.3797;InbreedingCoeff=0.7955;MQ=69.76;MQ0=1;MQRankSum=-2.012;QD=10.30;ReadPosRankSum=-0.622;VQSLOD=4.0724;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:58.41:0,58,384	1/1:5,3:8:9.80:68,10,0	0/0:22,0:18:4.41:0,4,35	0/1:14,0:11:0.93:5,0,1	0/0:28,0:29:64.18:0,64,422	1/1:5,14:20:0.61:181,1,0	1/1:10,8:17:0.72:72,1,0	1/1:12,14:26:20.20:259,20,0	0/0:13,0:15:15.14:0,15,88	1/1:15,15:29:25.87:275,26,0	1/1:14,7:21:22.70:276,23,0	1/1:7,14:21:20.88:175,21,0	0/0:18,1:19:12.65:0,13,220	1/1:5,17:22:34.38:315,34,0	1/1:17,11:31:37.28:427,37,0	1/1:10,9:20:20.01:228,20,0	1/1:7,21:28:19.14:425,19,0	1/1:7,17:24:29.87:265,30,0	1/1:11,15:26:30.35:272,30,0	1/1:12,9:21:15.50:172,16,0	1/1:6,9:16:15.74:128,16,0	1/1:4,12:16:17.89:148,18,0	0/0:18,2:20:7.41:0,7,188	0/0:21,1:22:19.57:0,20,275	1/1:4,12:17:23.82:201,24,0	1/1:10,6:15:19.56:205,20,0	1/1:7,17:25:26:284,26,0	1/1:6,6:13:7.27:129,7,0
chr10	64685468	.	T	TA	632.02	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-5.674;DP=688;FS=0.000;HRun=8;HaplotypeScore=67.9416;InbreedingCoeff=0.9945;MQ=77.51;MQ0=0;MQRankSum=-2.605;QD=25.28;ReadPosRankSum=-2.939;VQSLOD=3.1827;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:99:0,99,896	0/0:11,0:11:23.97:0,24,213	0/0:24,0:23:57.01:0,57,516	0/0:19,0:19:34.04:0,34,345	0/0:30,0:30:75:0,75,676	0/0:29,0:29:75.03:0,75,686	0/0:19,0:19:54.01:0,54,489	1/1:4,21:25:63.19:727,63,0	0/0:21,0:21:56.99:0,57,508	0/0:35,0:34:95.78:0,96,859	0/0:14,0:14:33.02:0,33,302	0/0:29,0:28:81.04:0,81,741	0/0:22,0:22:57:0,57,516	0/0:22,0:22:48.01:0,48,439	0/0:33,0:33:84.02:0,84,764	0/0:26,0:26:68.50:0,68,654	0/0:31,0:31:83.83:0,84,755	0/0:21,0:21:36.11:0,36,376	0/0:22,0:22:54.02:0,54,494	0/0:22,0:22:63:0,63,567	0/0:18,0:18:51.03:0,51,467	0/0:25,0:25:75.01:0,75,675	0/0:20,0:20:57.03:0,57,522	0/0:21,0:21:54.03:0,54,494	0/0:34,0:34:96.05:0,96,878	0/0:27,0:27:75.04:0,75,686	0/0:45,0:44:99:0,114,1038	0/0:10,0:10:22.56:0,23,196
chr10	64687558	.	AGTTTCTCTGAAT	A	1152.56	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.537;DP=597;FS=6.195;HRun=0;HaplotypeScore=198.0251;InbreedingCoeff=0.9972;MQ=85.76;MQ0=0;MQRankSum=-4.067;QD=82.33;ReadPosRankSum=-0.011;VQSLOD=2.8795;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:87.30:0,87,4809	0/0:9,0:9:24.08:0,24,1277	0/0:28,0:27:76.14:0,76,3765	0/0:24,0:24:51.13:0,51,2355	1/1:1,13:14:36.12:1247,36,0	0/0:19,0:19:51.18:0,51,3070	0/0:17,0:17:39.13:0,39,2076	0/0:30,0:30:69.23:0,69,3190	0/0:20,0:20:57.20:0,57,3199	0/0:26,0:26:63.22:0,63,3190	0/0:20,0:20:48.16:0,48,2745	0/0:26,0:26:63.22:0,63,3396	0/0:20,0:20:57.20:0,57,2937	0/0:26,0:26:72.25:0,72,4118	0/0:25,0:25:66.23:0,66,3832	0/0:26,0:26:75.26:0,75,4447	0/0:27,0:27:75.26:0,75,4308	0/0:21,0:21:63.20:0,63,3320	0/0:16,0:16:33.11:0,33,1855	0/0:18,0:18:45.15:0,45,2593	0/0:16,0:16:42.14:0,42,2254	0/0:18,0:18:54.19:0,54,2954	0/0:11,0:11:33.11:0,33,1966	0/0:20,0:20:57.18:0,57,3236	0/0:20,0:20:54.17:0,54,3066	0/0:27,0:27:63.21:0,63,3248	0/0:28,0:28:78.27:0,78,4207	0/0:13,0:13:39.13:0,39,2088
chr10	64687804	.	A	AT	10209.31	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-11.581;DP=458;FS=0.976;HRun=7;HaplotypeScore=45.7106;InbreedingCoeff=0.9378;MQ=66.99;MQ0=1;MQRankSum=0.388;QD=28.92;ReadPosRankSum=0.821;VQSLOD=5.2336;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:69.09:0,69,661	1/1:3,11:14:33.10:399,33,0	0/0:5,0:3:5.04:0,5,34	0/0:10,0:7:11.68:0,12,80	0/0:32,0:32:87.09:0,87,820	1/1:5,20:25:57.17:689,57,0	1/1:0,6:6:12.04:145,12,0	1/1:6,38:44:99:1365,114,0	0/0:6,0:6:12.02:0,12,116	1/1:1,22:23:66.08:765,66,0	1/1:2,25:27:75.23:906,75,0	1/1:3,11:14:35.98:413,36,0	0/0:8,0:8:21.02:0,21,197	1/1:1,11:12:30.09:362,30,0	1/1:1,11:12:30.09:363,30,0	1/1:1,10:11:30.09:362,30,0	1/1:5,16:22:36.57:427,37,0	1/1:4,11:15:29.30:332,29,0	1/1:3,11:14:33.08:385,33,0	1/1:1,15:16:42.10:492,42,0	1/1:1,5:6:15.05:181,15,0	1/1:2,4:6:9.03:109,9,0	0/0:8,0:8:9:0,9,87	0/0:8,0:8:18.02:0,18,170	1/1:3,21:24:60.18:725,60,0	1/1:2,15:17:45.11:521,45,0	1/1:2,28:30:63.19:761,63,0	1/1:1,14:15:42.13:507,42,0
chr10	64688371	.	TAA	T	3774.29	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-0.344;DP=310;FS=2.590;HRun=14;HaplotypeScore=39.6150;InbreedingCoeff=0.8395;MQ=59.85;MQ0=23;MQRankSum=4.132;QD=18.23;ReadPosRankSum=5.047;VQSLOD=2.3164;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:11:9.98:0,10,35	1/1:1,4:5:6.69:103,7,0	0/0:9,0:6:9.01:0,9,100	0/0:6,0:4:3.63:0,4,35	0/0:2,0:11:17.85:0,18,65	1/1:6,7:12:11.94:111,12,0	1/1:1,4:4:9.01:83,9,0	0/0:37,0:37:89.61:0,90,1099	0/0:3,0:5:12.03:0,12,155	1/1:5,14:17:32.89:304,33,0	1/1:0,9:10:20.89:241,21,0	1/1:2,4:5:11.99:111,12,0	0/0:9,0:8:20.07:0,20,238	1/1:2,5:6:11.99:111,12,0	1/1:0,4:4:12.01:111,12,0	1/1:1,6:6:18.02:167,18,0	1/1:3,10:12:27.03:250,27,0	1/1:3,16:18:41.61:371,42,0	1/1:7,11:17:29.99:278,30,0	1/1:1,6:7:15.75:163,16,0	1/1:0,7:7:18.02:167,18,0	1/1:0,1:1:3:28,3,0	0/0:4,0:4:12.03:0,12,151	0/0:2,0:1:0:0,0,0	1/1:0,13:14:29.90:325,30,0	1/1:8,9:15:26.93:250,27,0	1/1:3,12:15:36.04:333,36,0	1/1:5,13:14:23.89:269,24,0
chr10	64689285	.	A	AC	3439.04	PASS	AB=0.691;AC=33;AF=0.589;AN=56;BaseQRankSum=-3.522;DP=571;FS=5.314;HRun=10;HaplotypeScore=80.6954;InbreedingCoeff=0.2144;MQ=69.73;MQ0=7;MQRankSum=-1.382;QD=9.83;ReadPosRankSum=-1.641;VQSLOD=2.5116;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:9,3:13:8.94:81,9,0	1/1:5,2:7:6.02:63,6,0	0/0:73,0:31:15.73:0,16,277	0/0:73,1:33:23.91:0,24,171	1/1:2,1:6:5.81:34,6,0	1/1:8,8:16:18.05:191,18,0	1/1:11,12:23:11.66:296,12,0	0/1:22,6:28:19.49:184,0,19	0/0:23,0:24:58.95:0,59,473	0/1:11,7:19:8.65:126,0,9	0/1:10,4:13:6.59:117,0,7	0/1:3,10:13:5.28:131,0,5	0/0:10,0:10:23.96:0,24,194	0/1:9,9:18:28.13:139,0,28	1/1:7,19:27:5.30:262,5,0	1/1:6,14:20:30.01:305,30,0	0/1:11,12:23:78.13:216,0,78	0/1:9,10:19:18.73:206,0,19	0/1:9,11:21:28.74:245,0,29	1/1:5,7:12:14.83:130,15,0	1/1:7,10:17:18.52:170,19,0	0/1:4,3:6:0:0,0,0	0/0:14,0:15:26:0,26,202	0/0:22,0:22:53.87:0,54,433	0/1:6,3:9:18.62:26,0,19	0/1:6,8:13:9.66:83,0,10	1/1:8,11:20:12.61:306,13,0	1/1:0,4:4:12.03:127,12,0
chr10	64689513	.	GA	G	5657.82	PASS	AB=0.761;AC=44;AF=0.786;AN=56;BaseQRankSum=1.222;DP=466;FS=2.769;HRun=13;HaplotypeScore=56.3206;InbreedingCoeff=0.5396;MQ=75.82;MQ0=0;MQRankSum=0.996;QD=13.77;ReadPosRankSum=3.052;VQSLOD=5.4995;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,23:28:62.57:459,63,0	1/1:1,11:12:29.82:219,30,0	0/0:19,1:14:5.05:0,5,63	0/1:20,0:18:12.52:13,0,57	1/1:3,9:16:34.26:219,34,0	1/1:2,16:18:41.71:302,42,0	1/1:5,14:21:45.97:319,46,0	1/1:11,16:29:48.71:340,49,0	0/0:11,1:14:10.87:0,11,231	1/1:6,18:25:55.68:397,56,0	1/1:2,12:14:29.78:219,30,0	0/1:2,6:8:11.27:91,0,11	0/0:6,0:7:14.19:0,14,169	0/1:4,8:12:0.26:152,0,0	1/1:1,12:14:34.76:247,35,0	1/1:1,8:10:19.92:137,20,0	1/1:4,22:28:55.72:400,56,0	1/1:1,19:20:50.71:372,51,0	1/1:5,14:19:41.74:305,42,0	1/1:4,10:16:7.71:202,8,0	1/1:5,12:17:13.36:199,13,0	1/1:2,11:14:31.81:225,32,0	0/0:12,1:14:4.27:0,4,225	0/1:13,2:15:7.78:8,0,249	1/1:3,9:13:25.86:181,26,0	1/1:1,14:17:45.78:314,46,0	1/1:5,12:18:37.77:268,38,0	1/1:0,4:5:10.99:72,11,0
chr10	64689620	.	GAAA	G	4129.95	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=2.931;DP=395;FS=3.693;HRun=17;HaplotypeScore=71.6971;InbreedingCoeff=0.9184;MQ=45.43;MQ0=7;MQRankSum=-2.627;QD=15.30;ReadPosRankSum=6.108;VQSLOD=1.9923;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:15:27.56:0,28,212	1/1:2,3:5:9.02:91,9,0	0/0:25,0:7:14.23:0,14,85	0/0:22,0:3:6.60:0,7,48	0/0:13,1:18:33.49:0,33,327	1/1:2,5:7:8.87:92,9,0	1/1:2,11:12:14.92:154,15,0	1/1:10,13:21:31.80:324,32,0	0/0:9,0:9:18.03:0,18,274	1/1:7,9:16:29.67:284,30,0	1/1:3,10:12:14.83:151,15,0	1/1:2,7:9:14.65:153,15,0	0/0:11,0:11:20.96:0,21,244	1/1:4,10:13:26.54:263,27,0	1/1:1,8:9:21.04:215,21,0	1/1:2,8:10:11.67:123,12,0	1/1:9,20:27:50.22:494,50,0	1/1:6,8:12:11.68:123,12,0	1/1:7,7:14:20.62:214,21,0	1/1:4,13:17:23.78:246,24,0	1/1:4,8:12:14.34:153,14,0	1/1:1,7:7:8.90:92,9,0	0/0:14,0:14:30.07:0,30,423	0/0:6,0:8:18.02:0,18,249	1/1:4,13:17:23.34:245,23,0	1/1:2,13:14:30.02:307,30,0	1/1:14,6:20:31.83:283,32,0	1/1:1,4:4:12.03:123,12,0
chr10	64689698	.	C	CA	12598.43	PASS	AB=1.000;AC=45;AF=0.804;AN=56;BaseQRankSum=-1.569;DP=581;FS=5.012;HRun=6;HaplotypeScore=112.4004;InbreedingCoeff=0.9088;MQ=58.50;MQ0=11;MQRankSum=-3.343;QD=29.64;ReadPosRankSum=1.643;VQSLOD=4.3777;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,17:18:39.12:486,39,0	1/1:0,4:4:12.04:147,12,0	0/0:44,0:15:9.47:0,9,241	0/0:60,1:18:37.67:0,38,335	1/1:3,19:21:54.17:665,54,0	1/1:0,15:15:42.13:523,42,0	1/1:4,11:15:42.13:517,42,0	1/1:5,24:29:69.18:849,69,0	0/0:15,0:15:37.80:0,38,358	1/1:7,21:28:72.22:888,72,0	1/1:4,13:17:39.10:451,39,0	1/1:4,11:15:39.12:483,39,0	0/1:12,0:12:0.14:0,0,206	1/1:11,14:25:61.28:695,61,0	1/1:0,12:12:36.11:438,36,0	1/1:5,7:12:28.33:340,28,0	1/1:9,10:18:38.97:446,39,0	1/1:9,10:19:38.98:438,39,0	1/1:6,13:17:17.50:496,18,0	1/1:6,24:30:81.21:986,81,0	1/1:7,5:12:15.05:184,15,0	1/1:2,16:18:51.16:637,51,0	0/0:19,0:19:32.67:0,33,507	0/0:10,0:8:21.01:0,21,204	1/1:4,26:30:84.25:1032,84,0	1/1:0,27:27:81.26:1012,81,0	1/1:2,19:21:63.18:772,63,0	1/1:3,3:6:9.03:113,9,0
chr10	64689717	.	AAAAC	A	1953.53	PASS	AB=0.951;AC=20;AF=0.357;AN=56;BaseQRankSum=4.317;DP=613;FS=29.553;HRun=0;HaplotypeScore=156.5153;InbreedingCoeff=-0.3976;MQ=56.00;MQ0=25;MQRankSum=-5.820;QD=5.43;ReadPosRankSum=5.136;VQSLOD=0.5422;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:16:31.88:248,32,0	0/1:6,0:6:12.95:13,0,14	0/0:67,0:19:26.30:0,26,172	0/0:78,0:15:15.81:0,16,185	0/0:21,0:20:11.65:0,12,205	0/1:17,0:17:62.94:63,0,109	0/1:19,1:19:99:162,0,101	0/1:22,1:23:35.09:35,0,253	0/0:16,0:16:38.03:0,38,491	0/1:22,9:31:99:151,0,193	0/1:12,4:16:17.80:251,0,18	0/1:13,0:13:41.49:41,0,104	0/0:18,0:18:32.49:0,32,395	0/1:21,4:25:99:324,0,203	0/1:12,0:12:17.73:18,0,98	0/1:13,1:14:14.83:132,0,15	0/1:18,2:19:75.21:146,0,75	0/1:20,0:20:44.54:45,0,138	0/1:22,1:19:67.07:67,0,170	0/1:25,0:25:42.97:43,0,256	0/1:11,0:11:6.30:6,0,46	0/1:16,0:16:85.20:85,0,103	0/0:15,0:15:38.03:0,38,445	0/0:14,0:13:28.84:0,29,358	0/1:24,1:25:99:165,0,195	0/1:27,0:26:99:122,0,184	0/0:17,0:17:6.41:0,6,214	0/0:3,0:3:8.95:0,9,68
chr10	64689718	.	AAAC	A	864.20	PASS	AB=0.963;AC=13;AF=0.232;AN=56;BaseQRankSum=7.541;DP=607;FS=33.039;HRun=0;HaplotypeScore=149.9879;InbreedingCoeff=-0.1739;MQ=57.87;MQ0=25;MQRankSum=-8.739;QD=3.46;ReadPosRankSum=9.348;VQSLOD=0.6955;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:15,1:16:32.88:286,33,0	0/0:6,0:6:4.46:0,4,35	0/0:70,0:19:27.90:0,28,188	0/0:80,0:16:18.57:0,19,175	0/0:21,0:20:11.27:0,11,175	0/0:17,0:17:0.72:0,1,120	0/1:20,0:19:87.63:88,0,113	0/0:24,0:24:12.84:0,13,283	0/0:15,0:15:32.35:0,32,380	0/1:30,1:31:66.26:66,0,208	0/1:16,0:16:28.96:99,0,29	0/0:12,0:12:7.76:0,8,117	0/0:18,0:18:10.14:0,10,264	0/1:23,2:25:99:175,0,211	0/0:12,0:12:2.65:0,3,98	0/1:13,0:13:23.91:60,0,24	0/1:20,0:19:64.13:72,0,64	0/1:15,5:20:52.71:53,0,122	0/1:20,1:17:27.13:27,0,185	0/0:24,0:24:10.76:0,11,275	0/0:9,1:10:6.12:0,6,54	0/0:16,0:16:9.74:0,10,131	0/0:15,0:15:34.52:0,35,360	0/0:14,0:13:30.47:0,30,312	0/1:25,0:25:40.03:40,0,198	0/1:26,0:25:43:43,0,187	0/1:16,1:17:7.71:8,0,200	0/0:3,0:3:8.95:0,9,68
chr10	64689721	.	CAAAA	C	4237.73	PASS	AB=0.837;AC=33;AF=0.589;AN=56;BaseQRankSum=0.707;DP=625;FS=16.745;HRun=19;HaplotypeScore=148.8008;InbreedingCoeff=0.4639;MQ=58.04;MQ0=25;MQRankSum=-3.952;QD=11.36;ReadPosRankSum=3.522;VQSLOD=-0.1931;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:13.47:0,13,98	1/1:5,0:6:8.88:81,9,0	0/0:70,0:18:9.43:0,9,129	0/0:78,0:16:1.61:0,2,114	0/0:15,2:20:8.30:0,8,172	1/1:12,3:17:5.80:215,6,0	0/1:15,4:21:6.04:242,0,6	1/1:26,1:27:31.77:307,32,0	0/0:13,0:14:36.02:0,36,568	1/1:22,3:26:27.97:342,28,0	1/1:9,9:18:26.78:395,27,0	1/1:6,6:12:11.20:139,11,0	0/0:17,0:17:33.02:0,33,528	1/1:27,2:30:25.91:375,26,0	1/1:8,2:11:11.11:111,11,0	1/1:8,3:15:27.78:289,28,0	0/1:17,1:21:17.62:217,0,18	0/1:14,3:19:27.45:64,0,27	1/1:21,2:20:17.01:223,17,0	1/1:18,4:22:2.52:186,3,0	1/1:6,4:10:2.46:34,2,0	1/1:8,8:16:6.15:274,6,0	0/0:14,0:14:27.06:0,27,450	0/0:14,0:15:30.07:0,30,450	1/1:18,7:27:0.37:362,0,0	0/1:19,4:26:10.83:251,0,11	0/1:18,2:22:1.75:130,0,2	0/0:3,0:3:0:0,0,0
chr10	64689725	.	A	AC	315.17	PASS	AB=0.904;AC=11;AF=0.196;AN=56;BaseQRankSum=-1.072;DP=611;FS=4.838;HRun=0;HaplotypeScore=132.0438;InbreedingCoeff=-0.2881;MQ=59.00;MQ0=23;MQRankSum=-0.570;QD=1.16;ReadPosRankSum=-0.590;VQSLOD=1.9214;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:47.44:0,47,357	0/1:3,3:6:8.20:8,0,30	0/0:71,0:18:34.54:0,35,250	0/1:74,0:14:4.22:4,0,88	0/0:22,0:22:44.34:0,44,366	0/0:14,3:17:1.01:0,1,160	0/0:20,1:20:18.33:0,18,204	0/1:19,3:22:89.74:90,0,137	0/0:14,0:14:42:0,42,421	0/1:30,0:30:21.95:22,0,230	0/1:18,0:18:54.18:54,0,69	0/0:11,0:11:17.73:0,18,146	0/0:17,0:17:35.93:0,36,351	0/1:24,3:27:60.11:60,0,245	0/1:12,1:13:23.56:24,0,132	0/1:13,3:16:49.31:49,0,78	0/1:20,2:21:81.18:81,0,142	0/0:19,0:19:0.26:0,0,191	0/1:19,4:20:34.07:34,0,208	0/0:16,1:17:10.65:0,11,247	0/0:9,0:9:8.86:0,9,58	0/0:16,0:16:5.91:0,6,176	0/0:14,0:14:40.77:0,41,367	0/0:16,0:15:34.41:0,34,307	0/0:23,2:25:0.37:0,0,258	0/0:26,0:25:31.24:0,31,273	0/1:20,1:21:27.76:28,0,234	0/0:3,0:3:9:0,9,77
chr10	64690353	.	T	TC	12964.39	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-14.769;DP=636;FS=2.804;HRun=5;HaplotypeScore=63.0941;InbreedingCoeff=0.9986;MQ=87.59;MQ0=0;MQRankSum=-4.656;QD=30.65;ReadPosRankSum=4.386;VQSLOD=5.4353;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:66.16:0,66,708	1/1:3,7:10:21.06:265,21,0	0/0:32,0:31:56.37:0,56,709	0/0:29,0:29:77.80:0,78,786	0/0:32,0:32:93.22:0,93,985	1/1:5,13:18:27.09:355,27,0	1/1:4,12:16:27.09:355,27,0	0/0:14,0:14:36.06:0,36,368	0/0:16,0:16:45.10:0,45,477	1/1:1,23:24:66.20:852,66,0	1/1:1,15:16:36.03:451,36,0	1/1:0,25:25:66.21:868,66,0	0/0:22,0:22:63.16:0,63,676	1/1:1,25:26:69.22:905,69,0	1/1:2,30:32:75.24:986,75,0	1/1:3,31:34:84.27:1105,84,0	1/1:2,17:19:48.16:632,48,0	1/1:0,10:10:27.09:355,27,0	1/1:6,16:22:48.12:599,48,0	1/1:1,17:18:41.93:484,42,0	1/1:3,31:34:78.25:1026,78,0	1/1:1,19:20:48.16:632,48,0	0/0:23,0:23:57.14:0,57,610	0/0:19,0:19:51.07:0,51,522	1/1:1,14:15:30.10:393,30,0	1/1:2,27:29:78.24:1008,78,0	1/1:5,38:43:99:1336,102,0	1/1:0,12:12:27.09:355,27,0
chr10	64690549	.	TA	T	3478.09	PASS	AB=0.773;AC=39;AF=0.696;AN=56;BaseQRankSum=0.146;DP=560;FS=4.053;HRun=15;HaplotypeScore=69.0796;InbreedingCoeff=0.4822;MQ=72.69;MQ0=2;MQRankSum=-0.726;QD=8.26;ReadPosRankSum=5.521;VQSLOD=3.0163;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:28:26.52:0,27,257	1/1:4,4:8:11.79:77,12,0	0/1:19,0:16:11.03:11,0,32	0/0:13,1:9:1.27:0,1,106	0/0:13,0:32:66.52:0,67,377	1/1:5,11:16:23.50:151,23,0	1/1:5,9:15:6.40:101,6,0	1/1:6,15:22:14:205,14,0	0/0:18,1:19:10.46:0,10,182	1/1:9,13:22:9.19:184,9,0	1/1:8,12:21:11.02:191,11,0	0/1:8,9:17:26.71:92,0,27	0/1:22,4:27:31.03:31,0,212	0/1:8,6:15:12.68:50,0,13	1/1:9,17:28:48.19:300,48,0	0/1:10,6:17:19.76:95,0,20	1/1:7,21:29:56.01:365,56,0	1/1:1,10:11:20.67:135,21,0	1/1:4,8:12:23.57:151,24,0	1/1:8,16:25:40.41:267,40,0	1/1:5,7:15:18.74:108,19,0	1/1:5,13:19:5.11:152,5,0	0/0:18,1:21:17.25:0,17,235	0/0:23,1:24:25.54:0,26,321	1/1:2,10:14:21.80:127,22,0	1/1:9,17:27:49.24:311,49,0	1/1:10,15:27:13.08:197,13,0	1/1:1,9:14:31.79:177,32,0
chr10	64690888	.	CCT	C	15150.55	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=12.239;DP=604;FS=44.582;HRun=0;HaplotypeScore=109.9059;InbreedingCoeff=0.9984;MQ=70.42;MQ0=0;MQRankSum=1.501;QD=33.89;ReadPosRankSum=8.690;VQSLOD=3.4909;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,114,1678	1/1:0,14:14:35.85:445,36,0	0/0:17,0:14:31.34:0,31,413	0/0:15,0:12:19.19:0,19,217	0/0:24,0:24:53.72:0,54,794	1/1:0,25:25:48.12:737,48,0	1/1:0,20:20:51.08:747,51,0	1/1:0,25:25:71.96:903,72,0	0/0:17,0:17:45.10:0,45,671	1/1:0,18:18:54.10:673,54,0	1/1:0,29:29:83.38:1067,83,0	1/1:0,20:20:36.12:542,36,0	0/0:12,0:12:36.01:0,36,464	1/1:1,19:20:45.10:668,45,0	1/1:0,20:20:51.12:753,51,0	1/1:1,21:22:54.17:799,54,0	1/1:0,31:31:75.25:1154,75,0	1/1:0,23:23:51.17:780,51,0	1/1:0,18:18:53.99:609,54,0	1/1:1,22:23:62.82:788,63,0	1/1:0,32:32:57.15:845,57,0	1/1:0,23:23:63.05:921,63,0	0/0:15,0:15:38.01:0,38,397	0/0:14,0:14:42.05:0,42,677	1/1:0,19:20:39.10:607,39,0	1/1:0,30:30:87.22:1210,87,0	1/1:0,18:18:24.08:362,24,0	1/1:0,15:16:36.12:540,36,0
chr10	64690889	.	CT	C	2347.21	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=11.132;DP=616;FS=22.055;HRun=16;HaplotypeScore=148.2407;InbreedingCoeff=0.9365;MQ=68.71;MQ0=0;MQRankSum=-2.072;QD=5.24;ReadPosRankSum=7.989;VQSLOD=0.1590;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,4:45:26.47:0,26,508	1/1:14,0:14:19.39:67,19,0	0/0:17,0:14:19.82:0,20,129	0/0:13,0:10:5.21:0,5,27	0/0:23,2:24:24:0,24,272	1/1:25,0:25:38.74:133,39,0	1/1:20,0:20:37.39:129,37,0	1/1:25,0:25:40.42:143,40,0	0/0:18,2:20:2.92:0,3,122	1/1:18,0:18:24.67:88,25,0	1/1:29,0:29:47.43:163,47,0	1/1:20,0:20:27.59:94,28,0	0/0:14,0:14:17.92:0,18,139	1/1:20,0:20:36.71:130,37,0	1/1:20,0:20:37.58:130,38,0	1/1:22,0:22:42.66:147,43,0	1/1:32,0:32:57.95:204,58,0	1/1:23,0:23:40.51:139,41,0	1/1:18,0:18:20.96:80,21,0	1/1:23,0:23:36.34:128,36,0	1/1:32,0:32:42.92:148,43,0	1/1:23,0:23:46.23:160,46,0	0/0:19,0:19:12.84:0,13,97	0/0:14,1:15:17.92:0,18,250	1/1:20,0:20:31.66:111,32,0	1/1:30,0:30:55.87:194,56,0	1/1:18,0:18:18.65:62,19,0	1/1:16,0:16:28.62:97,29,0
chr10	64691661	.	G	GATA	24373.94	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=11.585;DP=657;FS=4.066;HRun=0;HaplotypeScore=137.8917;InbreedingCoeff=0.9987;MQ=74.60;MQ0=0;MQRankSum=-4.917;QD=57.22;ReadPosRankSum=1.531;VQSLOD=6.3837;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:63.22:0,63,1074	1/1:1,10:12:33.11:720,33,0	0/0:18,0:18:45.07:0,45,723	0/0:14,0:14:42.09:0,42,623	0/0:32,0:32:96.31:0,96,1610	1/1:2,19:21:57.15:1248,57,0	1/1:5,26:31:84.29:1863,84,0	0/0:32,0:32:50.72:0,51,683	0/0:31,0:31:90.31:0,90,1528	1/1:8,21:30:81.17:1664,81,0	1/1:2,16:19:48.12:1011,48,0	1/1:4,18:22:60.17:1291,60,0	0/0:26,0:26:69.17:0,69,1177	1/1:6,21:27:69.16:1476,69,0	1/1:2,30:33:72.21:1593,72,0	1/1:1,23:24:72.25:1639,72,0	1/1:1,12:13:39.13:872,39,0	1/1:1,8:8:24.08:526,24,0	1/1:7,20:28:84.26:1749,84,0	1/1:4,27:31:87.22:1844,87,0	1/1:4,8:12:21.03:429,21,0	1/1:1,17:20:57.15:1236,57,0	0/0:22,0:22:63.22:0,63,1067	0/0:32,0:31:93.26:0,93,1515	1/1:4,20:24:63.13:1304,63,0	1/1:8,21:31:81.17:1653,81,0	1/1:1,27:28:81.28:1833,81,0	1/1:5,6:11:24:422,24,0
chr10	64692502	.	TGA	T	2145.71	PASS	AB=0.921;AC=26;AF=0.464;AN=56;BaseQRankSum=3.810;DP=645;FS=33.651;HRun=0;HaplotypeScore=196.8410;InbreedingCoeff=-0.3263;MQ=46.36;MQ0=15;MQRankSum=-6.091;QD=4.45;ReadPosRankSum=-0.093;VQSLOD=1.4786;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:25:44.59:0,45,707	0/1:8,3:11:35.76:36,0,60	0/1:12,1:8:19.12:19,0,74	0/1:15,0:7:25.58:26,0,70	0/1:18,0:18:21.92:22,0,215	0/1:18,5:22:14.07:145,0,14	1/1:25,9:30:14.94:141,15,0	0/1:33,0:28:99:183,0,138	0/0:24,0:24:72.03:0,72,1125	0/1:25,3:26:99:171,0,101	0/1:15,1:14:34.51:63,0,35	1/1:21,5:25:16.89:123,17,0	0/0:33,0:31:75.51:0,76,1266	1/1:16,4:19:14.91:116,15,0	0/1:32,5:37:19.23:157,0,19	0/1:22,6:27:99:132,0,120	0/1:18,0:17:44.94:45,0,69	0/1:3,0:3:31.92:32,0,35	0/1:26,0:25:93.98:202,0,94	0/0:18,3:21:0.01:0,0,131	0/1:21,0:19:11.43:11,0,92	1/1:19,3:21:11.99:100,12,0	0/0:22,0:22:49.06:0,49,978	0/0:35,0:35:93.24:0,93,1614	0/1:19,4:23:66.64:67,0,144	0/1:31,0:28:99:223,0,185	0/1:27,2:27:99:200,0,114	0/1:4,3:7:91.36:104,0,91
chr10	64692511	.	GTA	G	1464.14	PASS	AB=0.993;AC=24;AF=0.429;AN=56;BaseQRankSum=5.807;DP=645;FS=26.718;HRun=0;HaplotypeScore=203.9734;InbreedingCoeff=-0.2205;MQ=45.54;MQ0=18;MQRankSum=-7.521;QD=3.25;ReadPosRankSum=-2.580;VQSLOD=1.1875;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:22:35.34:0,35,427	0/1:10,0:10:34.64:35,0,62	0/1:6,0:3:5.95:6,0,51	0/0:8,0:2:5.23:0,5,64	0/0:18,1:19:4.77:0,5,173	0/1:22,1:22:77.72:119,0,78	1/1:30,1:27:11.65:90,12,0	0/1:38,0:31:99:151,0,197	0/0:24,0:24:72.19:0,72,1263	0/1:34,0:32:99:114,0,299	0/1:17,0:15:55.77:56,0,91	1/1:25,0:24:12.42:98,12,0	0/0:36,0:35:83.69:0,84,1609	1/1:19,0:18:11.60:90,12,0	0/1:36,0:36:72.56:95,0,73	0/1:30,1:30:99:123,0,179	0/1:19,0:18:20.24:20,0,123	0/1:3,0:3:24.59:30,0,25	0/1:25,0:21:99:109,0,142	0/0:21,0:21:6.07:0,6,226	0/1:20,0:18:8.92:9,0,128	1/1:21,0:20:5.99:50,6,0	0/0:24,0:23:60.14:0,60,1009	0/0:38,0:38:99:0,99,1844	0/1:23,1:24:42.45:42,0,395	0/1:29,0:26:99:150,0,355	0/1:30,0:28:99:184,0,161	0/1:9,0:9:65.10:65,0,78
chr10	64692519	.	ATG	A	3530.06	PASS	AB=0.794;AC=32;AF=0.615;AN=52;BaseQRankSum=6.407;DP=627;FS=3.565;HRun=0;HaplotypeScore=199.4653;InbreedingCoeff=0.2165;MQ=44.62;MQ0=19;MQRankSum=1.028;QD=7.35;ReadPosRankSum=-3.279;VQSLOD=2.9110;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:15,9:22:12.59:175,0,13	0/1:6,2:8:26.06:64,0,26	./.	./.	1/1:2,0:20:17.58:132,18,0	1/1:17,4:20:20.96:229,21,0	1/1:24,9:29:5.93:57,6,0	1/1:43,0:36:36.85:394,37,0	0/0:22,0:22:54.18:0,54,824	0/1:16,12:26:29.20:425,0,29	1/1:10,3:11:9.03:109,9,0	0/1:20,0:25:31.27:31,0,95	0/0:38,0:37:49.36:0,49,776	0/1:22,0:21:5.19:5,0,50	1/1:27,6:35:15.06:182,15,0	1/1:17,12:28:9.09:238,9,0	1/1:9,10:18:18.03:217,18,0	0/1:2,1:3:15.51:28,0,16	0/1:24,2:22:49.95:98,0,50	1/1:11,12:25:6.42:303,6,0	1/1:8,7:13:12.04:146,12,0	0/1:11,0:20:0:0,0,0	0/0:24,0:23:51.15:0,51,730	0/0:34,0:34:65.25:0,65,989	0/0:21,0:21:28.22:0,28,144	0/1:20,7:25:52.49:289,0,52	0/1:17,13:29:27.91:285,0,28	1/1:4,5:9:13.62:124,14,0
chr10	64692529	.	GTGTGTGTGTATGTATGTA	G	2092.62	PASS	AB=1.000;AC=9;AF=0.173;AN=52;BaseQRankSum=0.671;DP=639;FS=5.522;HRun=0;HaplotypeScore=359.5380;InbreedingCoeff=0.3758;MQ=46.55;MQ0=16;MQRankSum=-5.470;QD=10.52;ReadPosRankSum=-2.821;VQSLOD=0.6433;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:21:8.75:254,9,0	0/0:9,0:9:20.85:0,21,485	./.	./.	0/0:20,0:20:4.04:0,4,191	0/0:23,0:22:24.88:0,25,964	0/1:32,0:28:9.13:9,0,196	1/1:10,41:45:99:1829,119,0	0/0:24,0:24:69.24:0,69,3263	0/1:30,0:28:15.15:15,0,2161	0/0:16,0:14:24.08:0,24,962	0/0:24,0:24:27.07:0,27,1057	0/0:36,0:35:84.24:0,84,2767	0/0:23,0:22:22.96:0,23,889	0/0:41,0:41:44.41:0,44,1524	0/0:33,0:32:40.45:0,40,1573	0/1:18,0:17:37.44:37,0,708	0/0:6,0:6:17.34:0,17,311	0/1:25,0:21:86.20:86,0,773	0/0:27,0:27:39.13:0,39,1707	0/0:13,0:11:15.05:0,15,671	0/1:19,0:18:0:0,0,0	0/0:22,0:21:54.19:0,54,2008	0/0:33,0:33:84.24:0,84,3480	0/0:23,0:23:30.06:0,30,1537	0/0:26,0:25:57.32:0,57,1937	0/0:29,0:27:38.74:0,39,1277	0/0:9,0:9:15.05:0,15,602
chr10	64692531	.	G	GTA	1509.06	PASS	AB=0.996;AC=20;AF=0.385;AN=52;BaseQRankSum=7.475;DP=640;FS=5.149;HRun=0;HaplotypeScore=220.4008;InbreedingCoeff=0.0342;MQ=46.79;MQ0=17;MQRankSum=0.121;QD=3.90;ReadPosRankSum=7.287;VQSLOD=1.7358;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:21,3:21:23.47:282,23,0	0/0:9,0:9:4.20:0,4,74	./.	./.	0/1:19,1:20:23.37:78,0,23	0/1:22,0:21:16.05:16,0,31	0/1:30,0:26:21.53:22,0,46	1/1:51,0:44:13.75:409,14,0	0/0:26,0:26:72.13:0,72,956	0/1:31,0:29:99:103,0,162	0/0:16,0:14:6.69:0,7,106	0/0:24,0:24:26.46:0,26,265	0/0:35,0:34:82.48:0,82,1126	0/0:22,0:21:24.31:0,24,222	0/0:41,0:41:4.04:0,4,139	0/1:34,0:33:14.70:15,0,101	0/1:18,0:17:10.33:72,0,10	0/1:7,0:7:8.70:9,0,38	0/0:25,0:21:15.86:0,16,194	0/1:27,0:27:18.84:19,0,65	0/1:14,0:12:11.85:12,0,31	0/1:20,0:19:0.01:0,0,0	0/0:21,0:20:54.14:0,54,759	0/0:32,0:32:84.18:0,84,1144	1/1:7,16:23:12.25:475,12,0	0/1:27,0:26:41.76:42,0,191	0/1:29,0:27:52.69:98,0,53	1/1:9,0:9:8.85:24,9,0
chr10	64692535	.	GTGTA	G	379.80	PASS	AB=0.976;AC=7;AF=0.135;AN=52;BaseQRankSum=3.124;DP=647;FS=9.511;HRun=0;HaplotypeScore=243.1202;InbreedingCoeff=0.4263;MQ=47.55;MQ0=15;MQRankSum=-2.500;QD=2.36;ReadPosRankSum=1.129;VQSLOD=1.1752;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:22:15.27:15,0,19	0/0:10,0:10:11.89:0,12,88	./.	./.	0/1:21,0:21:9.88:46,0,10	0/0:22,0:21:23.67:0,24,159	0/0:31,0:27:17.99:0,18,173	1/1:49,0:44:17.26:69,17,0	0/0:27,0:27:29.12:0,29,762	0/0:30,0:28:50.42:0,50,381	0/0:17,0:15:26.76:0,27,245	0/0:27,0:27:3.76:0,4,215	1/1:21,15:36:24.08:377,24,0	0/0:21,0:20:17.11:0,17,203	0/0:42,0:42:44.64:0,45,340	0/0:32,0:31:41.60:0,42,352	0/0:19,0:18:14.78:0,15,99	0/0:8,0:8:0.42:0,0,99	0/0:26,0:21:17.89:0,18,163	0/0:27,0:27:44.27:0,44,316	0/0:13,0:12:17.74:0,18,121	0/0:21,0:20:5.97:0,6,50	0/0:20,0:19:21.07:0,21,462	0/1:26,1:30:5.08:5,0,610	0/0:25,0:25:29.91:0,30,466	0/0:28,0:26:56.38:0,56,417	0/0:28,0:27:34.40:0,34,254	0/0:9,0:9:8.77:0,9,55
chr10	64693250	.	GA	G	508.60	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.612;DP=655;FS=0.753;HRun=9;HaplotypeScore=82.0650;InbreedingCoeff=0.9931;MQ=82.42;MQ0=0;MQRankSum=-0.879;QD=18.16;ReadPosRankSum=-3.570;VQSLOD=2.7590;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:87.23:0,87,984	0/0:8,0:8:24.07:0,24,277	0/0:28,0:26:45.32:0,45,496	0/0:24,0:24:36.06:0,36,389	0/0:25,0:25:63.18:0,63,718	0/0:24,0:24:54.15:0,54,615	0/0:11,0:11:21.06:0,21,242	1/1:6,22:28:66.03:603,66,0	0/0:17,0:17:48.12:0,48,535	0/0:28,0:28:72.21:0,72,826	0/0:21,0:21:42.12:0,42,485	0/0:20,0:20:54.13:0,54,609	0/0:14,0:14:42.12:0,42,476	0/0:27,0:27:75.18:0,75,843	0/0:21,0:21:60.18:0,60,692	0/0:20,0:20:54.16:0,54,619	0/0:30,0:30:81.21:0,81,921	0/0:30,1:31:56.78:0,57,907	0/0:25,1:26:41.73:0,42,731	0/0:31,0:31:75.22:0,75,866	0/0:14,0:14:36.07:0,36,401	0/0:15,0:15:45.12:0,45,509	0/0:21,0:21:51.15:0,51,588	0/0:18,0:18:51.13:0,51,570	0/0:28,0:28:75.22:0,75,866	0/0:51,0:51:99:0,144,1646	0/0:32,0:30:75.21:0,75,854	0/0:10,0:10:30.07:0,30,335
chr10	64693281	.	CA	C	342.94	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=6.022;DP=650;FS=2.371;HRun=11;HaplotypeScore=73.3134;InbreedingCoeff=0.6730;MQ=73.01;MQ0=0;MQRankSum=-1.052;QD=8.79;ReadPosRankSum=-0.906;VQSLOD=2.5656;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:84.21:0,84,896	0/0:13,0:13:39.10:0,39,416	0/0:22,0:20:39.37:0,39,321	0/1:14,0:13:6.94:7,0,135	1/1:5,20:25:27.92:436,28,0	0/0:26,0:27:75.01:0,75,775	0/0:10,0:10:27.07:0,27,288	0/0:37,0:37:66.64:0,67,704	0/0:19,1:20:32.50:0,33,548	0/0:31,0:31:72.18:0,72,765	0/0:13,0:13:30.08:0,30,320	0/0:27,0:28:48.81:0,49,698	0/0:21,0:21:54.11:0,54,561	0/0:22,0:22:63.13:0,63,656	0/0:24,1:25:29.47:0,29,506	0/0:17,0:17:45.11:0,45,474	0/0:25,1:27:38.30:0,38,577	0/0:33,0:33:87.20:0,87,920	0/0:25,0:25:63.14:0,63,658	0/0:23,1:24:32.46:0,32,539	0/0:12,0:13:26.89:0,27,263	0/0:22,0:22:57.13:0,57,600	0/0:11,0:11:21.04:0,21,216	0/0:17,0:17:45.11:0,45,480	0/0:23,2:26:13.69:0,14,534	0/0:47,1:48:83.62:0,84,1083	0/0:29,0:29:53.91:0,54,708	0/0:13,0:13:21.05:0,21,224
chr10	64693602	.	G	GCACA	31464.93	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-12.337;DP=624;FS=2.800;HRun=0;HaplotypeScore=96.4944;InbreedingCoeff=0.9984;MQ=93.79;MQ0=0;MQRankSum=-9.612;QD=65.14;ReadPosRankSum=4.216;VQSLOD=6.8643;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,35:37:90.31:2447,90,0	1/1:0,11:11:27.09:691,27,0	0/0:37,0:37:99:0,102,1814	0/0:24,0:24:29.71:0,30,1044	1/1:6,15:22:33.11:874,33,0	1/1:3,18:21:51.18:1385,51,0	1/1:4,18:23:60.21:1584,60,0	1/1:4,18:23:66.23:1723,66,0	0/0:23,0:23:66.21:0,66,1204	1/1:5,17:22:60.16:1531,60,0	1/1:2,13:15:26.74:684,27,0	1/1:3,23:27:69.24:1870,69,0	0/0:17,0:17:48.16:0,48,930	1/1:0,15:15:42.14:1134,42,0	1/1:3,27:30:81.28:2190,81,0	1/1:3,12:15:39.13:1063,39,0	1/1:3,35:38:84.29:2300,84,0	1/1:1,12:13:33.11:904,33,0	1/1:0,13:13:36.12:963,36,0	1/1:2,16:18:48.16:1289,48,0	1/1:4,37:42:93.32:2520,93,0	1/1:1,21:23:51.18:1341,51,0	0/0:18,0:18:38.17:0,38,882	0/0:22,0:22:63.22:0,63,1212	1/1:0,12:13:30.10:799,30,0	1/1:3,26:30:81.28:2204,81,0	1/1:1,21:22:51.18:1393,51,0	1/1:1,9:10:21.07:575,21,0
chr10	64694171	.	A	AT	8037.09	PASS	AB=0.789;AC=38;AF=0.679;AN=56;BaseQRankSum=-11.892;DP=554;FS=10.335;HRun=10;HaplotypeScore=60.5479;InbreedingCoeff=0.6946;MQ=75.55;MQ0=0;MQRankSum=-1.424;QD=19.70;ReadPosRankSum=0.715;VQSLOD=5.3982;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:37:67.62:0,68,686	0/1:3,10:13:0.58:200,0,1	0/1:17,0:16:6.68:7,0,93	0/1:13,0:12:36.90:37,0,65	0/0:15,0:16:35.94:0,36,313	1/1:4,13:17:17.46:391,17,0	1/1:6,12:18:30.08:320,30,0	0/0:6,0:18:24.43:0,24,71	0/0:18,0:19:40.92:0,41,318	1/1:2,13:15:36.06:367,36,0	1/1:3,16:19:28.51:448,29,0	1/1:5,21:27:63.03:654,63,0	0/0:19,0:19:47.76:0,48,378	1/1:1,16:17:29.81:320,30,0	1/1:6,22:30:44.20:643,44,0	1/1:3,16:19:14.45:359,14,0	1/1:3,23:26:63.16:672,63,0	1/1:3,15:18:39.10:416,39,0	1/1:5,15:20:45.01:446,45,0	0/1:7,15:23:20.63:383,0,21	1/1:7,16:23:45.11:480,45,0	1/1:5,12:17:26.66:266,27,0	0/0:11,0:11:32.52:0,33,252	0/0:26,0:25:62.88:0,63,513	1/1:0,22:22:54.14:576,54,0	1/1:4,20:24:35.47:568,35,0	1/1:6,19:26:8.33:420,8,0	1/1:1,3:4:6.02:64,6,0
chr10	64696279	.	A	AAAC	7871.59	PASS	AB=1.000;AC=40;AF=0.714;AN=56;BaseQRankSum=-2.092;DP=700;FS=0.705;HRun=0;HaplotypeScore=121.8261;InbreedingCoeff=0.8113;MQ=65.37;MQ0=7;MQRankSum=0.509;QD=15.11;ReadPosRankSum=7.676;VQSLOD=4.2684;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:27:11.26:11,0,369	1/1:12,1:13:23.54:212,24,0	0/0:25,0:8:20.04:0,20,195	0/0:36,0:18:6.27:0,6,124	0/1:35,0:33:24.56:25,0,577	1/1:20,1:21:50.65:431,51,0	1/1:17,0:17:40.83:287,41,0	0/0:37,0:37:79.82:0,80,590	0/0:23,0:23:60.37:0,60,785	1/1:29,0:29:69.18:551,69,0	1/1:34,0:34:62.90:607,63,0	1/1:22,1:23:20.33:241,20,0	0/0:18,0:18:48.01:0,48,620	1/1:24,1:25:56.89:491,57,0	1/1:38,0:38:74.80:599,75,0	1/1:30,0:30:59.48:482,59,0	1/1:27,0:27:50.87:410,51,0	1/1:28,0:28:49.81:359,50,0	1/1:23,0:23:64.81:404,65,0	1/1:39,0:39:83.71:711,84,0	1/1:12,0:12:23.94:193,24,0	1/1:21,0:20:48.76:382,49,0	0/0:28,0:28:80.92:0,81,1082	0/0:12,0:12:36.12:0,36,558	1/1:24,0:24:47.90:403,48,0	1/1:21,0:21:59.34:456,59,0	1/1:23,0:23:52.76:398,53,0	1/1:10,0:10:26.94:217,27,0
chr10	64696280	.	A	AAC	15251.41	PASS	AB=1.000;AC=39;AF=0.696;AN=56;BaseQRankSum=-15.672;DP=711;FS=1.497;HRun=0;HaplotypeScore=83.9721;InbreedingCoeff=0.9494;MQ=65.52;MQ0=7;MQRankSum=0.809;QD=30.08;ReadPosRankSum=8.285;VQSLOD=6.0234;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:56.23:0,56,470	1/1:2,11:14:23.61:303,24,0	0/0:25,0:8:20.43:0,20,198	0/1:37,0:19:1.54:2,0,132	0/0:36,0:34:84.90:0,85,692	1/1:2,21:24:51.13:790,51,0	1/1:1,15:16:42.13:616,42,0	0/0:36,0:36:90.62:0,91,762	0/0:23,0:23:62.10:0,62,802	1/1:2,29:32:92.12:1191,92,0	1/1:2,31:33:64.90:1157,65,0	1/1:7,15:23:34.72:452,35,0	0/0:18,0:18:47.88:0,48,594	1/1:2,24:26:57.15:902,57,0	1/1:1,36:39:75.71:1202,76,0	1/1:2,28:31:60.15:975,60,0	1/1:1,25:27:51.16:828,51,0	1/1:1,26:28:51.14:739,51,0	1/1:1,21:23:63.98:829,64,0	1/1:5,33:40:98.62:1287,99,0	1/1:0,12:12:24.08:390,24,0	1/1:1,20:20:50.81:677,51,0	0/0:28,0:28:80.99:0,81,1054	0/0:12,0:12:36.11:0,36,516	1/1:1,23:24:48.16:758,48,0	1/1:0,21:21:60.15:892,60,0	1/1:4,20:25:53.91:823,54,0	1/1:0,10:10:27.09:439,27,0
chr10	64696281	.	A	AC	4949.83	PASS	AB=1.000;AC=37;AF=0.661;AN=56;BaseQRankSum=2.719;DP=705;FS=4.379;HRun=0;HaplotypeScore=109.5046;InbreedingCoeff=0.9064;MQ=65.49;MQ0=7;MQRankSum=-1.173;QD=10.64;ReadPosRankSum=9.880;VQSLOD=4.1310;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:59.56:0,60,446	0/1:14,0:14:16.73:94,0,17	0/0:25,0:8:17.62:0,18,176	0/0:37,0:19:18.27:0,18,185	0/0:36,0:34:91.14:0,91,640	1/1:23,0:23:27.35:229,27,0	1/1:14,1:15:38.15:184,38,0	0/0:35,0:35:90.58:0,91,756	0/0:23,0:23:58.39:0,58,714	1/1:34,0:33:19.86:348,20,0	1/1:35,0:35:63.36:416,63,0	1/1:20,2:22:19.55:185,20,0	0/0:18,0:18:42.83:0,43,518	1/1:25,0:25:34.44:267,34,0	1/1:40,0:40:70.53:378,71,0	1/1:32,0:32:18.15:265,18,0	1/1:25,0:25:49.26:264,49,0	1/1:27,0:27:47.13:244,47,0	1/1:23,0:23:42.42:236,42,0	1/1:37,0:37:49.54:458,50,0	1/1:12,0:12:23.22:125,23,0	1/1:20,1:20:46.25:320,46,0	0/0:27,0:27:81.04:0,81,977	0/0:12,0:12:36.09:0,36,467	1/1:23,0:23:46.27:246,46,0	1/1:22,0:22:57.13:313,57,0	1/1:24,1:25:8.58:237,9,0	1/1:10,0:10:26.12:140,26,0
chr10	64703542	.	T	TAA	1920.88	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-6.982;DP=609;FS=2.161;HRun=2;HaplotypeScore=69.1791;InbreedingCoeff=0.9993;MQ=94.50;MQ0=0;MQRankSum=-5.856;QD=49.25;ReadPosRankSum=2.700;VQSLOD=3.6213;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,36:39:99:2016,108,0	0/0:14,0:14:42.14:0,42,615	0/0:28,0:28:75.25:0,75,1090	0/0:29,0:29:81.24:0,81,1143	0/0:22,0:22:66.20:0,66,949	0/0:15,0:15:42.14:0,42,619	0/0:15,0:15:42.12:0,42,598	0/0:43,0:43:99:0,123,1728	0/0:18,0:18:51.17:0,51,751	0/0:18,0:18:54.17:0,54,775	0/0:18,0:18:54.18:0,54,795	0/0:18,0:18:45.15:0,45,663	0/0:14,0:14:42.14:0,42,619	0/0:21,0:21:60.19:0,60,864	0/0:23,0:23:69.23:0,69,1016	0/0:29,0:29:87.25:0,87,1223	0/0:24,0:24:69.23:0,69,1013	0/0:17,0:17:48.16:0,48,705	0/0:21,0:21:60.19:0,60,863	0/0:13,0:13:39.13:0,39,573	0/0:32,0:32:93.31:0,93,1370	0/0:11,0:11:33.11:0,33,486	0/0:17,0:17:51.17:0,51,751	0/0:24,0:24:66.22:0,66,971	0/0:21,0:21:60.20:0,60,884	0/0:26,0:26:78.25:0,78,1129	0/0:28,0:28:81.27:0,81,1190	0/0:11,0:11:33.11:0,33,486
chr10	64705022	.	A	ATG	727.64	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-6.111;DP=675;FS=4.059;HRun=0;HaplotypeScore=120.6945;InbreedingCoeff=0.9863;MQ=69.44;MQ0=1;MQRankSum=2.825;QD=24.25;ReadPosRankSum=-4.984;VQSLOD=3.0132;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:90.28:0,90,1114	0/0:20,0:20:37.21:0,37,144	0/0:26,0:23:25.35:0,25,344	0/0:20,0:18:29.95:0,30,303	0/0:25,0:25:25.45:0,25,192	0/0:23,0:23:29.11:0,29,81	0/0:26,0:26:46.58:0,47,153	1/1:10,19:30:60.09:823,60,0	0/0:22,0:22:60.18:0,60,731	0/0:22,0:22:34.69:0,35,153	0/0:18,0:18:27.44:0,27,129	0/0:20,0:20:37.41:0,37,120	0/0:21,0:21:51.13:0,51,606	0/0:21,0:21:33.32:0,33,107	0/0:28,0:28:42.94:0,43,173	0/0:25,0:25:40.63:0,41,148	0/0:25,0:25:41.16:0,41,177	0/0:16,0:16:22.41:0,22,62	0/0:17,0:17:26.52:0,27,103	0/0:25,0:25:36.09:0,36,119	0/0:33,0:33:60.33:0,60,277	0/0:21,0:21:30.12:0,30,117	0/0:25,0:25:36.09:0,36,422	0/0:29,0:29:72.19:0,72,863	0/0:33,0:33:44.37:0,44,123	0/0:27,0:27:48.32:0,48,239	0/0:27,0:27:43.40:0,43,170	0/0:16,0:16:22.18:0,22,61
chr10	64705035	.	T	TG	10935.61	PASS	AB=1.000;AC=39;AF=0.696;AN=56;BaseQRankSum=-12.800;DP=664;FS=1.099;HRun=7;HaplotypeScore=73.1167;InbreedingCoeff=0.8792;MQ=67.39;MQ0=11;MQRankSum=-1.433;QD=23.42;ReadPosRankSum=3.114;VQSLOD=5.2672;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,105,1013	1/1:4,15:19:45.13:532,45,0	0/0:27,0:23:0.72:0,1,226	0/0:20,0:18:37.54:0,38,333	0/0:21,0:21:59.95:0,60,545	1/1:1,21:22:51.16:616,51,0	1/1:4,26:30:61.74:729,62,0	0/1:29,0:29:12.41:12,0,221	0/0:22,0:22:63.09:0,63,603	1/1:6,18:23:51.59:590,52,0	1/1:4,12:15:27.08:323,27,0	1/1:3,20:23:51.06:616,51,0	0/0:22,0:22:63.10:0,63,607	1/1:2,20:22:45.14:543,45,0	1/1:3,25:28:60.18:722,60,0	1/1:3,23:26:51.16:616,51,0	1/1:4,20:24:25.23:586,25,0	1/1:1,12:13:35.14:405,35,0	1/1:1,14:14:38.58:427,39,0	1/1:1,21:21:48.12:565,48,0	1/1:7,27:32:51.26:746,51,0	1/1:4,16:19:36.11:435,36,0	0/0:19,0:19:36.05:0,36,347	0/0:28,0:28:78.12:0,78,753	1/1:2,27:27:57.14:785,57,0	1/1:5,21:26:51.14:604,51,0	1/1:5,25:29:56.80:686,57,0	1/1:1,14:14:32.32:397,32,0
chr10	64705719	.	T	TGTCA	15935.14	PASS	AB=0.536;AC=37;AF=0.661;AN=56;BaseQRankSum=-12.855;DP=454;FS=0.000;HRun=0;HaplotypeScore=68.5145;InbreedingCoeff=0.8907;MQ=91.98;MQ0=0;MQRankSum=-6.895;QD=56.31;ReadPosRankSum=4.029;VQSLOD=6.0996;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:42.14:0,42,764	1/1:0,3:3:9.03:238,9,0	0/0:22,0:22:57.19:0,57,1022	0/0:19,0:19:51.14:0,51,834	0/0:13,0:13:30.10:0,30,552	1/1:3,13:17:27.09:711,27,0	1/1:5,27:35:60.21:1541,60,0	0/0:18,0:18:51.17:0,51,939	0/0:26,0:26:63.22:0,63,1159	1/1:3,12:16:36.12:886,36,0	1/1:1,6:7:18.06:474,18,0	1/1:1,18:19:51.18:1344,51,0	0/0:16,0:16:48.13:0,48,814	1/1:0,15:14:39.13:1028,39,0	1/1:1,8:7:24.08:631,24,0	0/1:2,13:15:22.09:758,0,22	1/1:4,27:31:66.23:1740,66,0	1/1:4,21:26:60.21:1584,60,0	1/1:3,8:11:21.04:458,21,0	1/1:0,5:5:9.03:237,9,0	1/1:6,23:31:68.89:1814,69,0	1/1:0,5:6:12.04:311,12,0	0/0:11,0:11:33.11:0,33,597	0/0:30,0:30:81.28:0,81,1489	1/1:0,7:7:12.04:317,12,0	1/1:3,9:12:24.08:597,24,0	1/1:0,12:12:30.10:791,30,0	1/1:0,6:6:18.06:475,18,0
chr10	64706221	.	A	AC	6707.74	PASS	AB=0.533;AC=43;AF=0.768;AN=56;BaseQRankSum=-5.220;DP=437;FS=2.934;HRun=8;HaplotypeScore=57.1451;InbreedingCoeff=0.8387;MQ=79.28;MQ0=3;MQRankSum=-3.102;QD=20.96;ReadPosRankSum=1.093;VQSLOD=4.9877;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:18:19.51:215,20,0	1/1:0,6:6:15.04:173,15,0	0/0:41,0:29:15.02:0,15,190	0/0:38,0:19:3.95:0,4,69	1/1:2,11:14:33.48:347,33,0	1/1:3,1:17:28.41:144,28,0	1/1:3,0:14:28.76:167,29,0	1/1:15,0:14:7.66:77,8,0	0/0:9,0:10:23.03:0,23,193	1/1:2,12:14:33.02:347,33,0	1/1:1,8:9:24.02:261,24,0	1/1:2,11:13:30.04:330,30,0	0/0:11,0:11:29.97:0,30,262	1/1:2,12:14:30.09:346,30,0	1/1:4,9:13:27.08:312,27,0	1/1:2,9:11:12.04:138,12,0	1/1:3,28:31:66.66:756,67,0	1/1:6,16:22:48.02:524,48,0	1/1:8,9:17:26.96:262,27,0	1/1:1,14:15:42.08:469,42,0	1/1:0,12:12:27.08:311,27,0	1/1:0,9:9:21.06:239,21,0	0/0:5,0:5:14.99:0,15,130	0/0:11,0:11:27:0,27,247	0/1:1,7:8:15.38:92,0,15	1/1:1,14:15:39.08:436,39,0	1/1:3,15:18:27.08:311,27,0	1/1:2,13:15:39.12:450,39,0
chr10	64706229	.	CA	C	282.01	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=1.830;DP=445;FS=0.760;HRun=8;HaplotypeScore=79.8702;InbreedingCoeff=0.6678;MQ=82.42;MQ0=2;MQRankSum=0.951;QD=5.32;ReadPosRankSum=-0.811;VQSLOD=0.1821;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,16:20:32.94:303,33,0	0/0:6,0:6:14.91:0,15,110	0/0:38,0:27:24.27:0,24,300	0/0:34,1:20:6.42:0,6,112	1/1:18,0:18:2.32:86,2,0	0/0:17,0:17:38.82:0,39,295	0/0:15,0:15:17.78:0,18,245	0/1:14,0:14:3.24:3,0,36	0/0:9,0:9:23.99:0,24,258	0/0:15,0:15:32.82:0,33,247	0/0:11,0:11:29.89:0,30,243	0/0:13,0:13:29.82:0,30,220	0/0:11,0:11:30.07:0,30,336	0/0:13,0:13:32.80:0,33,244	0/0:13,0:13:38.84:0,39,303	0/0:10,0:10:14.92:0,15,112	0/0:33,0:33:74.46:0,74,547	0/0:22,0:22:53.72:0,54,414	0/0:14,0:14:26.91:0,27,214	0/0:18,0:18:53.63:0,54,405	0/0:14,0:14:32.82:0,33,245	0/0:9,0:9:20.75:0,21,143	0/0:5,0:5:12.04:0,12,143	0/0:13,0:13:39.09:0,39,441	0/0:9,0:9:14.94:0,15,125	0/0:17,0:17:47.81:0,48,381	0/0:17,0:17:32.84:0,33,248	0/0:13,0:13:38.77:0,39,285
chr10	64706453	.	A	AAAAACAAAAC	21055.26	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-5.322;DP=587;FS=11.031;HRun=0;HaplotypeScore=157.9160;InbreedingCoeff=0.9583;MQ=55.16;MQ0=2;MQRankSum=-13.239;QD=56.75;ReadPosRankSum=-3.563;VQSLOD=3.3855;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,99,2895	1/1:7,2:9:9.03:411,9,0	0/0:18,0:14:12.04:0,12,340	0/0:20,0:14:24.08:0,24,595	0/0:26,0:26:57.18:0,57,1596	1/1:17,4:23:21.07:952,21,0	1/1:16,6:23:21.07:944,21,0	0/0:27,0:27:57.17:0,57,1513	0/0:20,0:20:45.14:0,45,1280	1/1:10,9:19:30.10:1506,30,0	1/1:7,8:15:33.11:1362,33,0	1/1:14,7:23:29.93:1426,30,0	0/0:21,0:21:30.70:0,31,1103	1/1:12,12:24:42.14:1977,42,0	1/1:9,7:17:18.06:903,18,0	1/1:16,5:21:24.08:1073,24,0	1/1:21,6:28:23.36:1090,23,0	1/1:13,5:20:9.03:416,9,0	1/1:20,5:28:36.11:1285,36,0	1/1:5,4:10:21.07:881,21,0	1/1:20,3:24:18.06:691,18,0	1/1:11,5:17:30.10:1360,30,0	0/0:11,0:11:21.06:0,21,555	0/0:26,0:26:10.33:0,10,1407	1/1:7,6:14:21.07:922,21,0	1/1:14,8:21:36.10:1421,36,0	1/1:16,8:28:41.97:1865,42,0	1/1:2,3:5:12.04:569,12,0
chr10	64706638	.	GT	G	9907.48	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=12.209;DP=529;FS=2.814;HRun=7;HaplotypeScore=52.0835;InbreedingCoeff=0.9784;MQ=71.83;MQ0=0;MQRankSum=-1.775;QD=25.94;ReadPosRankSum=1.589;VQSLOD=5.4732;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:66.20:0,66,817	1/1:1,7:8:18.04:184,18,0	0/0:16,0:16:16.28:0,16,265	0/0:7,0:6:5.96:0,6,75	0/0:27,0:27:75.23:0,75,930	1/1:3,19:22:48.10:490,48,0	1/1:1,10:11:30.07:306,30,0	0/0:24,0:24:57.17:0,57,706	0/0:16,0:16:48.14:0,48,593	1/1:0,25:25:75.15:756,75,0	1/1:3,24:27:66.14:670,66,0	1/1:2,17:19:42.09:428,42,0	0/0:15,0:15:45.14:0,45,566	1/1:1,15:16:42.09:427,42,0	1/1:2,11:13:30.06:306,30,0	1/1:0,17:17:39.09:398,39,0	1/1:2,18:20:51.11:519,51,0	1/1:3,26:29:72.16:735,72,0	1/1:7,23:30:69.11:693,69,0	1/1:2,28:30:84.18:853,84,0	1/1:0,17:17:45.10:459,45,0	1/1:1,14:15:39.09:397,39,0	0/0:11,0:11:24.08:0,24,300	0/0:7,0:7:18.06:0,18,226	1/1:1,16:17:42.09:428,42,0	1/1:1,21:22:63.13:636,63,0	1/1:0,31:31:81.18:825,81,0	1/1:0,13:13:39.09:398,39,0
chr10	64707599	.	AAAAC	A	13194.07	PASS	AB=1.000;AC=39;AF=0.696;AN=56;BaseQRankSum=4.893;DP=634;FS=3.520;HRun=0;HaplotypeScore=111.8267;InbreedingCoeff=0.9159;MQ=61.77;MQ0=8;MQRankSum=1.768;QD=29.13;ReadPosRankSum=3.689;VQSLOD=4.8793;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:59.91:0,60,1031	1/1:1,8:9:17.99:305,18,0	0/0:19,0:14:17.99:0,18,274	0/1:23,0:12:9.74:10,0,170	0/0:19,0:19:45.12:0,45,781	1/1:2,15:17:33.11:559,33,0	1/1:7,15:22:27.09:444,27,0	0/0:28,0:28:41.29:0,41,734	0/0:16,0:16:42.14:0,42,973	1/1:5,22:27:66.19:1011,66,0	1/1:6,14:20:48.02:684,48,0	1/1:4,16:20:42.14:711,42,0	0/0:21,0:21:45.14:0,45,919	1/1:5,20:25:45.15:736,45,0	1/1:2,27:29:51.17:864,51,0	1/1:3,12:15:27.09:458,27,0	1/1:6,28:34:57.20:967,57,0	1/1:6,15:18:30.10:509,30,0	1/1:8,16:23:45.05:655,45,0	1/1:2,20:22:57.07:858,57,0	1/1:4,16:20:33.06:518,33,0	1/1:4,20:24:45.02:637,45,0	0/0:26,0:26:57.18:0,57,1246	0/0:21,0:21:51.17:0,51,1198	1/1:6,26:32:57.01:842,57,0	1/1:3,25:28:75.19:1148,75,0	1/1:4,28:32:65.94:1074,66,0	1/1:0,9:9:12.04:204,12,0
chr10	64707611	.	CAAACA	C	4283.80	PASS	AB=0.995;AC=25;AF=0.446;AN=56;BaseQRankSum=15.444;DP=617;FS=4.580;HRun=0;HaplotypeScore=150.2324;InbreedingCoeff=-0.0161;MQ=64.45;MQ0=7;MQRankSum=2.278;QD=9.69;ReadPosRankSum=9.796;VQSLOD=2.0058;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:60.08:0,60,1278	0/1:12,0:12:76.89:77,0,79	0/0:17,0:10:16.37:0,16,378	0/1:21,0:14:8.31:8,0,316	0/0:19,0:19:45.14:0,45,960	0/1:18,0:18:28.03:156,0,28	1/1:17,1:18:20.39:196,20,0	0/0:20,0:20:57.12:0,57,1117	0/0:22,0:22:63.21:0,63,1517	0/1:25,0:25:27.47:308,0,27	1/1:16,3:19:15.38:324,15,0	1/1:17,0:17:41.17:247,41,0	0/0:19,0:19:54.16:0,54,1274	0/1:25,2:27:46.28:304,0,46	0/1:31,0:31:40.39:241,0,40	0/1:13,0:13:3.71:130,0,4	0/1:32,0:32:24.03:271,0,24	0/1:19,0:16:0.60:144,0,1	0/1:22,0:21:99:176,0,141	0/1:24,0:24:36.56:265,0,37	0/1:21,0:21:68.03:130,0,68	1/1:21,1:22:40.85:299,41,0	0/0:29,0:29:75.24:0,75,1809	0/0:24,0:24:66.21:0,66,1690	0/1:30,0:30:5.52:269,0,6	1/1:28,0:28:5.96:335,6,0	0/1:33,0:33:27.14:349,0,27	0/1:10,0:10:18.22:56,0,18
chr10	64707612	.	AAAC	A	6576.34	PASS	AB=0.995;AC=31;AF=0.554;AN=56;BaseQRankSum=12.105;DP=613;FS=3.441;HRun=0;HaplotypeScore=120.6462;InbreedingCoeff=0.2889;MQ=64.67;MQ0=7;MQRankSum=0.998;QD=14.88;ReadPosRankSum=9.110;VQSLOD=3.9775;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:60:0,60,787	0/1:13,0:13:65.75:156,0,66	0/0:18,0:10:22.90:0,23,269	0/1:21,0:14:13.02:13,0,202	0/0:19,0:19:27.48:0,27,579	0/1:17,0:17:10.17:249,0,10	1/1:18,0:18:30.01:273,30,0	0/0:20,0:20:56.73:0,57,809	0/0:22,0:22:63.15:0,63,1076	1/1:25,0:25:0.84:473,1,0	1/1:18,1:19:26.25:409,26,0	1/1:17,0:17:41.99:366,42,0	0/0:18,0:18:54.11:0,54,903	0/1:27,0:27:19.87:351,0,20	0/1:31,0:31:13.35:385,0,13	1/1:13,0:13:5.45:212,5,0	1/1:32,0:32:12.73:447,13,0	1/1:18,0:15:8.40:238,8,0	0/1:22,0:21:84.92:297,0,85	0/1:24,0:24:8.37:399,0,8	0/1:21,1:22:50.39:288,0,50	1/1:21,1:22:44.27:361,44,0	0/0:27,0:27:75.16:0,75,1280	0/0:24,0:24:66.16:0,66,1198	1/1:29,1:30:13.64:455,14,0	1/1:28,0:28:48.19:579,48,0	1/1:32,1:33:1.47:535,1,0	0/1:10,0:10:9.62:90,0,10
chr10	64707615	.	C	CAA	1082.69	PASS	AB=0.952;AC=5;AF=0.089;AN=56;BaseQRankSum=-6.135;DP=616;FS=18.594;HRun=10;HaplotypeScore=134.4038;InbreedingCoeff=0.7811;MQ=64.79;MQ0=7;MQRankSum=1.995;QD=17.19;ReadPosRankSum=-2.198;VQSLOD=0.2628;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,18:24:48.16:700,48,0	0/0:12,0:13:23.73:0,24,230	0/1:18,0:11:10.19:10,0,109	0/0:16,0:12:14.73:0,15,136	1/1:2,14:19:41.50:500,42,0	0/0:17,0:17:37.79:0,38,263	0/0:18,0:19:23.45:0,23,183	0/0:22,0:22:21.26:0,21,427	0/0:22,0:22:57.11:0,57,580	0/0:26,0:26:63.37:0,63,467	0/0:19,0:19:44.04:0,44,292	0/0:17,0:17:40.83:0,41,259	0/0:18,0:19:47.80:0,48,466	0/0:26,0:26:56.14:0,56,395	0/0:30,0:30:58.64:0,59,409	0/0:13,0:13:29.68:0,30,206	0/0:32,0:32:65.10:0,65,448	0/0:17,0:14:32.59:0,33,224	0/0:23,0:22:53.66:0,54,432	0/0:24,0:24:56.34:0,56,412	0/0:22,0:22:38.30:0,38,326	0/0:22,0:22:34.58:0,35,220	0/0:26,0:26:69.10:0,69,700	0/0:23,0:23:66.15:0,66,670	0/0:29,0:29:53.21:0,53,366	0/0:30,0:30:68.65:0,69,479	0/0:34,0:34:73.27:0,73,504	0/0:11,0:11:14.82:0,15,108
chr10	64710028	.	T	TAA	10298.51	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=-6.156;DP=584;FS=5.505;HRun=11;HaplotypeScore=77.8263;InbreedingCoeff=0.9729;MQ=78.30;MQ0=3;MQRankSum=-0.865;QD=23.30;ReadPosRankSum=0.032;VQSLOD=4.5175;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,18:25:48.56:641,49,0	1/1:1,9:13:23.51:259,24,0	0/0:24,0:20:18.75:0,19,189	0/0:21,0:20:5.97:0,6,221	0/0:32,0:33:69.80:0,70,731	1/1:2,16:19:36.12:507,36,0	1/1:2,10:12:22.89:309,23,0	1/1:8,0:29:23.54:176,24,0	0/0:10,0:10:24.01:0,24,227	1/1:3,20:25:62.51:785,63,0	1/1:6,0:26:40.30:154,40,0	1/1:2,20:23:41.63:573,42,0	0/0:21,0:21:50.97:0,51,476	1/1:4,15:22:41.31:504,41,0	1/1:7,15:23:35.99:507,36,0	1/1:3,10:14:24.04:325,24,0	1/1:5,25:32:30.10:435,30,0	1/1:5,12:18:32.69:430,33,0	1/1:5,13:20:22.04:623,22,0	1/1:4,28:32:84.16:1146,84,0	1/1:2,6:8:15.05:217,15,0	1/1:4,11:16:42.06:552,42,0	0/0:12,0:12:24.02:0,24,233	0/0:18,0:18:39.01:0,39,378	1/1:5,25:32:50.60:650,51,0	1/1:4,14:21:47.64:639,48,0	1/1:3,16:19:33.11:477,33,0	1/1:2,9:11:27.09:391,27,0
chr10	64713202	.	G	GA	698.90	PASS	AB=0.979;AC=6;AF=0.107;AN=56;BaseQRankSum=-5.251;DP=675;FS=1.201;HRun=11;HaplotypeScore=106.3210;InbreedingCoeff=0.2409;MQ=73.98;MQ0=0;MQRankSum=-0.914;QD=6.53;ReadPosRankSum=-1.438;VQSLOD=2.0727;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:37:88.68:0,89,679	0/1:10,0:10:13.27:13,0,79	0/0:6,0:8:13.66:0,14,86	0/0:17,0:17:23.69:0,24,167	1/1:14,32:46:10.66:779,11,0	0/1:22,0:22:2.24:2,0,173	0/0:12,0:12:14.16:0,14,74	0/0:32,0:34:72.76:0,73,544	0/0:19,0:19:38.78:0,39,302	0/0:33,1:34:27.08:0,27,229	0/0:18,0:18:10.31:0,10,148	0/0:22,1:23:17.99:0,18,206	0/0:29,1:30:38.23:0,38,471	0/0:17,0:17:26:0,26,144	0/0:31,0:31:71.56:0,72,378	0/0:17,0:17:39.86:0,40,212	0/0:31,0:31:54.35:0,54,346	0/1:10,1:11:4.53:5,0,98	0/0:31,1:32:20.19:0,20,201	0/0:31,0:31:59.27:0,59,325	0/0:24,0:24:57.30:0,57,299	0/0:33,0:33:41.46:0,41,316	0/0:33,0:33:74.66:0,75,580	0/0:29,0:31:75.77:0,76,569	0/1:18,0:18:4.43:4,0,98	0/0:23,1:24:25.91:0,26,220	0/0:17,0:17:1.15:0,1,108	0/0:13,1:14:7.24:0,7,158
chr10	64716381	.	TCTTCA	T	28134.09	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=16.461;DP=694;FS=2.468;HRun=0;HaplotypeScore=149.6578;InbreedingCoeff=0.9981;MQ=64.69;MQ0=0;MQRankSum=-10.760;QD=62.11;ReadPosRankSum=7.330;VQSLOD=5.1357;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,138,4587	1/1:0,7:7:18.06:419,18,0	0/0:27,0:27:81.28:0,81,2571	0/0:31,0:31:69.49:0,69,2398	0/0:20,0:20:57.20:0,57,1895	1/1:0,27:27:75.26:1746,75,0	1/1:0,32:32:69.24:1604,69,0	0/0:30,0:29:87.30:0,87,2778	0/0:17,0:17:51.18:0,51,1666	1/1:0,33:33:99:2303,99,0	1/1:0,17:17:45.15:1047,45,0	1/1:0,31:31:87.30:2025,87,0	0/0:15,0:15:45.15:0,45,1494	1/1:0,27:27:78.21:1815,78,0	1/1:0,25:25:72.25:1677,72,0	1/1:0,16:16:48.16:1116,48,0	1/1:0,39:39:99:2515,108,0	1/1:0,27:27:69.24:1606,69,0	1/1:0,14:14:42.05:765,42,0	1/1:0,21:21:51.18:1187,51,0	1/1:1,19:20:36.12:834,36,0	1/1:0,20:20:48.16:1118,48,0	0/0:18,0:18:54.17:0,54,1659	0/0:37,0:37:99:0,108,3429	1/1:0,21:21:57.20:1327,57,0	1/1:0,34:34:99:2305,99,0	1/1:0,35:35:96.33:2235,96,0	1/1:0,7:7:21.07:489,21,0
chr10	64718235	.	GGA	G	2540.42	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=-1.659;DP=308;FS=0.673;HRun=0;HaplotypeScore=40.1190;InbreedingCoeff=0.8341;MQ=78.11;MQ0=5;MQRankSum=-0.869;QD=13.03;ReadPosRankSum=-1.798;VQSLOD=2.3628;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:11:23.92:193,24,0	1/1:4,0:4:9.84:70,10,0	0/0:28,0:10:7.63:0,8,169	0/0:35,0:14:20.86:0,21,211	0/0:8,3:10:14.32:0,14,102	1/1:8,0:9:17:118,17,0	1/1:14,0:14:35.86:283,36,0	1/1:5,0:5:5.90:42,6,0	0/0:7,0:7:12.01:0,12,115	1/1:8,0:7:9.01:83,9,0	1/1:5,0:5:2.94:18,3,0	1/1:13,0:12:14.30:119,14,0	0/0:12,0:12:35.80:0,36,408	1/1:10,0:10:18.03:144,18,0	1/1:8,0:8:12.92:100,13,0	1/1:8,0:8:17.87:133,18,0	1/1:15,1:16:24.09:217,24,0	1/1:11,0:11:25.18:177,25,0	1/1:7,0:7:14.91:134,15,0	1/1:3,1:4:2.95:24,3,0	1/1:26,0:26:38.25:275,38,0	1/1:4,0:4:11.99:99,12,0	0/0:10,0:10:14.99:0,15,128	0/0:9,0:9:11.99:0,12,123	1/1:10,0:10:17.73:137,18,0	1/1:7,0:7:17.97:146,18,0	1/1:11,0:10:10.28:131,10,0	1/1:4,0:4:11.93:89,12,0
chr10	64718236	.	GA	G	2983.38	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=-2.236;DP=295;FS=0.000;HRun=2;HaplotypeScore=34.1636;InbreedingCoeff=0.8533;MQ=79.64;MQ0=4;MQRankSum=-2.603;QD=16.13;ReadPosRankSum=-1.304;VQSLOD=2.8655;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:11:23.91:193,24,0	1/1:4,0:4:11.95:93,12,0	0/0:28,0:10:22.63:0,23,170	0/0:34,0:14:10.59:0,11,169	0/0:11,0:10:14.79:0,15,108	1/1:7,1:8:19.63:136,20,0	1/1:14,0:14:35.75:277,36,0	1/1:4,0:4:5.90:42,6,0	0/0:7,0:7:11.98:0,12,100	1/1:5,1:6:9.01:83,9,0	1/1:0,5:5:2.94:18,3,0	1/1:10,0:11:20.31:166,20,0	0/0:12,0:12:35.71:0,36,312	1/1:9,0:10:21.80:168,22,0	1/1:6,0:6:17.97:147,18,0	1/1:5,3:8:18.75:136,19,0	1/1:15,0:16:35.04:254,35,0	1/1:11,0:11:29.78:220,30,0	1/1:7,0:7:14.96:134,15,0	1/1:3,0:3:2.94:24,3,0	1/1:25,1:27:50.69:387,51,0	1/1:4,0:4:11.99:99,12,0	0/0:10,0:10:14.99:0,15,128	0/0:8,0:8:9.01:0,9,88	1/1:8,0:9:17.73:137,18,0	1/1:0,7:7:17.97:146,18,0	1/1:9,1:10:29.48:229,29,0	1/1:4,0:4:11.92:89,12,0
chr10	64721148	.	C	CG	3643.75	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=0.843;DP=404;FS=4.402;HRun=2;HaplotypeScore=71.8826;InbreedingCoeff=0.9407;MQ=81.89;MQ0=1;MQRankSum=-2.862;QD=15.18;ReadPosRankSum=0.502;VQSLOD=3.3770;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:28:56.34:0,56,485	1/1:5,0:5:13.46:80,13,0	0/0:21,0:13:12.89:0,13,142	0/0:26,0:22:3.83:0,4,138	0/0:11,0:11:26.25:0,26,185	1/1:10,1:11:25.85:184,26,0	1/1:18,0:18:39.49:242,39,0	0/0:29,0:29:12:0,12,412	0/0:15,0:15:30.02:0,30,300	1/1:9,0:9:25.96:196,26,0	1/1:7,0:7:16.47:102,16,0	1/1:13,0:13:31.92:190,32,0	0/0:10,0:10:18.43:0,18,175	1/1:20,0:20:39.46:241,39,0	1/1:10,1:11:21.20:121,21,0	1/1:15,2:17:17.62:237,18,0	1/1:17,1:18:43.67:264,44,0	1/1:17,0:17:40.96:251,41,0	1/1:20,0:20:42.67:347,43,0	1/1:10,0:10:26.36:183,26,0	1/1:17,0:17:37.29:229,37,0	1/1:9,0:9:25.62:173,26,0	0/0:8,0:8:20.12:0,20,211	0/0:15,0:15:39.05:0,39,404	1/1:7,0:7:20.19:142,20,0	1/1:16,0:16:38.48:264,38,0	1/1:10,0:10:24.83:159,25,0	1/1:5,0:5:6.59:39,7,0
chr10	64721646	.	G	GTTGT	2505.30	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-7.449;DP=637;FS=2.090;HRun=0;HaplotypeScore=101.2246;InbreedingCoeff=0.9109;MQ=70.04;MQ0=0;MQRankSum=-0.975;QD=37.39;ReadPosRankSum=-4.200;VQSLOD=2.4848;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,21:29:51.53:1298,52,0	0/0:7,0:7:5.87:0,6,98	0/0:20,0:20:30.10:0,30,446	0/0:14,0:14:23.25:0,23,363	0/0:30,0:30:69.24:0,69,1131	0/0:22,0:22:60.20:0,60,982	0/0:20,0:20:33.08:0,33,493	1/1:19,16:38:63.19:1329,63,0	0/0:16,0:16:39.13:0,39,638	0/0:33,0:33:78.26:0,78,1266	0/0:23,0:23:45.15:0,45,737	0/0:20,0:20:42.13:0,42,663	0/0:19,0:19:36.07:0,36,515	0/0:23,0:23:54.17:0,54,859	0/0:22,0:22:45.12:0,45,711	0/0:21,0:21:51.17:0,51,838	0/0:20,0:20:36.12:0,36,581	0/0:20,0:20:48.16:0,48,789	0/0:14,0:14:15.05:0,15,247	0/0:37,0:37:90.27:0,90,1423	0/0:24,0:24:54.17:0,54,861	0/0:29,0:29:63.20:0,63,1010	0/0:30,0:30:60.19:0,60,960	0/0:14,0:14:23.82:0,24,357	0/0:23,0:23:54.18:0,54,888	0/0:31,0:31:69.24:0,69,1133	0/0:31,0:31:75.26:0,75,1229	0/0:7,0:7:9.03:0,9,148
chr10	64723417	.	AACCTGTAGG	A	2282.30	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=8.758;DP=676;FS=4.573;HRun=0;HaplotypeScore=180.5186;InbreedingCoeff=0.9992;MQ=73.18;MQ0=0;MQRankSum=-8.474;QD=69.16;ReadPosRankSum=-1.518;VQSLOD=3.1517;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:54.16:0,54,2343	0/0:18,0:18:54.19:0,54,2638	0/0:15,0:15:42.14:0,42,1924	0/0:10,0:10:29.13:0,29,1145	1/1:1,32:33:87.30:2377,87,0	0/0:25,0:24:72.25:0,72,3518	0/0:20,0:20:60.21:0,60,2838	0/0:28,0:28:81.28:0,81,3699	0/0:34,0:34:99:0,99,4604	0/0:41,0:41:99:0,120,5673	0/0:24,0:24:72.25:0,72,3444	0/0:17,0:17:48.15:0,48,2020	0/0:28,0:28:84.29:0,84,4080	0/0:19,0:19:57.20:0,57,2796	0/0:21,0:21:60.21:0,60,2785	0/0:24,0:24:72.24:0,72,3397	0/0:27,0:27:75.26:0,75,3589	0/0:15,0:15:45.13:0,45,2042	0/0:18,0:18:54.19:0,54,2312	0/0:44,0:44:99:0,129,6307	0/0:22,0:22:66.23:0,66,3141	0/0:20,0:20:57.17:0,57,2551	0/0:26,0:26:78.27:0,78,3823	0/0:17,0:17:51.18:0,51,2433	0/0:22,0:22:66.23:0,66,3164	0/0:34,0:34:96.33:0,96,4693	0/0:42,0:40:99:0,126,5735	0/0:12,0:12:36.12:0,36,1766
chr10	64724140	.	T	TA	702.54	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-7.310;DP=542;FS=0.825;HRun=7;HaplotypeScore=47.0908;InbreedingCoeff=0.9298;MQ=69.85;MQ0=0;MQRankSum=-0.923;QD=28.10;ReadPosRankSum=-0.575;VQSLOD=3.8333;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:69.11:0,69,666	0/0:10,0:10:30.05:0,30,290	0/0:17,0:16:48.02:0,48,447	0/0:6,0:6:9:0,9,83	1/1:2,23:25:66.20:797,66,0	0/0:19,0:19:54.07:0,54,515	0/0:16,0:16:45.04:0,45,422	0/0:30,0:30:87.12:0,87,832	0/0:19,0:19:51.08:0,51,492	0/0:25,0:25:63.10:0,63,608	0/0:23,0:23:63.09:0,63,603	0/0:19,0:19:42.04:0,42,400	0/0:25,0:25:69.11:0,69,666	0/0:14,0:14:42.07:0,42,406	0/0:19,0:19:54.05:0,54,504	0/0:17,0:17:36.05:0,36,347	0/0:27,0:27:75.12:0,75,724	0/0:15,0:15:45.07:0,45,435	0/0:17,0:17:51.08:0,51,492	0/0:20,0:20:54.09:0,54,521	0/0:13,0:13:33.03:0,33,312	0/0:16,0:16:45.06:0,45,429	0/0:26,0:26:69.10:0,69,666	0/0:6,0:6:18.01:0,18,168	0/0:32,0:32:81.11:0,81,777	0/0:25,0:25:69.11:0,69,666	0/0:32,0:32:78.11:0,78,753	0/0:6,0:6:18.03:0,18,174
chr10	64725579	.	G	GTCC	8229.58	PASS	AB=0.610;AC=36;AF=0.643;AN=56;BaseQRankSum=-9.009;DP=392;FS=4.129;HRun=0;HaplotypeScore=54.7414;InbreedingCoeff=0.7663;MQ=81.36;MQ0=2;MQRankSum=-1.853;QD=34.87;ReadPosRankSum=2.527;VQSLOD=4.8081;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:54.18:0,54,789	1/1:1,4:5:3:62,3,0	0/0:24,0:21:8.25:0,8,321	0/0:23,0:21:23.77:0,24,331	0/0:11,0:11:18.05:0,18,244	1/1:1,7:8:21.07:409,21,0	1/1:6,16:22:48.16:948,48,0	0/0:26,0:26:39.12:0,39,536	0/0:11,0:11:21.07:0,21,307	0/1:1,7:8:19.85:409,0,20	1/1:1,4:5:9.03:161,9,0	1/1:6,13:19:27.09:557,27,0	0/0:13,0:12:33.11:0,33,480	1/1:4,5:10:9.03:185,9,0	1/1:4,7:11:15.05:310,15,0	1/1:3,11:14:27.06:516,27,0	1/1:5,11:16:34.36:639,34,0	1/1:3,5:8:12.04:248,12,0	1/1:3,9:12:27.09:544,27,0	1/1:4,6:10:18.06:320,18,0	1/1:12,18:30:44.67:904,45,0	0/1:6,5:11:24.89:266,0,25	0/0:12,0:12:24.06:0,24,314	0/0:13,0:13:20.10:0,20,269	1/1:1,15:16:30.10:619,30,0	1/1:2,5:7:18.06:352,18,0	1/1:7,10:19:33.11:680,33,0	1/1:3,2:5:6.02:101,6,0
chr10	64727553	.	CA	C	14712.20	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=20.320;DP=721;FS=2.389;HRun=3;HaplotypeScore=107.3751;InbreedingCoeff=0.9996;MQ=87.32;MQ0=0;MQRankSum=-3.429;QD=32.05;ReadPosRankSum=3.717;VQSLOD=4.6218;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:63.16:0,63,866	1/1:0,12:12:33.10:396,33,0	0/0:25,0:25:72.13:0,72,984	0/0:24,0:23:63.18:0,63,868	0/0:30,0:30:90.28:0,90,1274	1/1:1,27:28:75.23:897,75,0	1/1:0,23:23:63.19:756,63,0	0/0:43,0:43:99:0,117,1652	0/0:27,0:27:81.27:0,81,1166	1/1:2,30:32:50.02:1012,50,0	1/1:1,17:18:47.89:505,48,0	1/1:2,25:27:75.22:891,75,0	0/0:34,0:34:99:0,99,1404	1/1:2,18:20:42.13:504,42,0	1/1:2,34:36:93.28:1116,93,0	1/1:1,31:32:41.12:928,41,0	1/1:0,27:27:81.25:972,81,0	1/1:1,16:17:42.11:489,42,0	1/1:1,18:19:54.14:625,54,0	1/1:1,33:34:96.26:1136,96,0	1/1:4,25:29:78.22:923,78,0	1/1:0,32:32:96.29:1151,96,0	0/0:28,0:28:84.27:0,84,1190	0/0:28,0:28:81.27:0,81,1165	1/1:0,18:18:51.16:612,51,0	1/1:0,22:22:66.16:776,66,0	1/1:2,22:24:63.19:754,63,0	1/1:0,9:9:24.01:270,24,0
chr10	64729592	.	C	CA	2082.63	PASS	AB=0.673;AC=14;AF=0.250;AN=56;BaseQRankSum=-6.568;DP=586;FS=5.051;HRun=14;HaplotypeScore=70.8973;InbreedingCoeff=0.5798;MQ=78.44;MQ0=2;MQRankSum=0.419;QD=10.26;ReadPosRankSum=-2.144;VQSLOD=2.5888;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,1:36:34.59:0,35,456	0/0:4,0:4:2.93:0,3,19	0/1:30,4:19:30.59:37,0,31	0/0:20,0:14:0.52:0,1,2	0/0:6,0:30:48.32:0,48,140	0/0:24,0:27:59.28:0,59,364	0/0:12,0:13:25.61:0,26,160	0/0:27,0:31:59.15:0,59,363	0/0:16,0:17:36.79:0,37,224	0/0:20,0:24:29.45:0,29,287	0/0:21,2:23:22.55:0,23,258	0/0:12,1:14:8.18:0,8,172	0/0:11,0:13:21.66:0,22,125	0/0:17,0:17:38.26:0,38,249	1/1:7,15:22:6.45:304,6,0	0/0:16,1:18:17.06:0,17,229	1/1:4,14:18:24:211,24,0	0/0:16,0:19:43.52:0,44,252	0/1:6,18:25:8.29:407,0,8	1/1:3,17:21:44.70:361,45,0	1/1:4,7:11:15:132,15,0	0/0:13,0:14:35.39:0,35,228	0/0:26,0:29:59.99:0,60,373	0/0:11,0:13:28.56:0,29,176	0/0:19,1:20:26.85:0,27,299	0/1:12,20:35:4.12:432,0,4	0/1:13,18:32:34.93:270,0,35	1/1:1,4:5:12:105,12,0
chr10	64730398	.	C	CTACAA	909.65	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=0.204;DP=829;FS=5.272;HRun=0;HaplotypeScore=154.2240;InbreedingCoeff=0.9991;MQ=83.47;MQ0=0;MQRankSum=-1.231;QD=50.54;ReadPosRankSum=-2.955;VQSLOD=2.6978;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:62,0:62:99:0,166,3403	0/0:13,0:13:39.12:0,39,781	0/0:26,0:25:62.76:0,63,1146	0/0:25,0:25:28.68:0,29,1016	1/1:2,15:18:39.05:1004,39,0	0/0:17,0:17:51.18:0,51,1070	0/0:27,0:27:75.26:0,75,1574	0/0:35,0:35:87.28:0,87,1726	0/0:25,0:25:69.24:0,69,1447	0/0:26,0:26:78.21:0,78,1552	0/0:18,0:18:48.16:0,48,990	0/0:29,0:29:87.30:0,87,1811	0/0:34,0:34:93.32:0,93,1919	0/0:31,0:31:84.29:0,84,1748	0/0:43,0:43:99:0,123,2505	0/0:25,0:25:75.26:0,75,1559	0/0:38,0:38:99:0,105,2172	0/0:27,0:27:77.63:0,78,1580	0/0:17,0:17:51.15:0,51,996	0/0:30,0:30:81.28:0,81,1700	0/0:57,0:57:99:0,166,3358	0/0:35,0:35:99:0,99,2038	0/0:18,0:18:54.19:0,54,1132	0/0:45,0:45:99:0,135,2758	0/0:27,0:27:78.27:0,78,1632	0/0:37,0:37:99:0,108,2229	0/0:28,0:28:69.22:0,69,1384	0/0:16,0:16:48.16:0,48,1008
chr10	64730617	.	T	TACACAC	11353.46	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-0.710;DP=619;FS=1.453;HRun=0;HaplotypeScore=160.8081;InbreedingCoeff=0.7754;MQ=63.12;MQ0=9;MQRankSum=-6.255;QD=23.46;ReadPosRankSum=-3.686;VQSLOD=4.1768;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:27:9.01:165,9,0	1/1:6,3:10:2.36:97,2,0	0/0:31,0:17:3.01:0,3,58	0/0:26,0:17:0.47:0,0,1	1/1:17,0:18:7.79:223,8,0	1/1:18,0:22:11.91:253,12,0	1/1:15,2:18:9.03:200,9,0	1/1:30,0:29:26.97:498,27,0	0/0:11,0:16:12.57:0,13,192	1/1:10,1:17:33.11:752,33,0	1/1:14,6:19:12.01:312,12,0	1/1:21,7:31:30.10:904,30,0	0/0:18,0:18:24.08:0,24,469	1/1:11,7:25:24.08:636,24,0	1/1:13,10:26:24.08:766,24,0	1/1:10,3:24:33.11:835,33,0	1/1:20,6:30:18.06:449,18,0	1/1:10,1:14:15.05:341,15,0	1/1:18,0:21:13.51:261,14,0	1/1:13,3:19:12.01:322,12,0	1/1:21,0:21:15.02:446,15,0	1/1:17,4:26:40.85:1121,41,0	0/0:17,0:20:27.98:0,28,506	0/0:23,0:24:51.17:0,51,997	1/1:10,11:21:23.90:775,24,0	1/1:13,12:27:63.21:1475,63,0	1/1:25,0:29:14.96:426,15,0	1/1:2,1:4:3.01:97,3,0
chr10	64732186	.	AC	A	2294.81	PASS	AB=0.861;AC=41;AF=0.732;AN=56;BaseQRankSum=-2.078;DP=397;FS=0.000;HRun=12;HaplotypeScore=57.7633;InbreedingCoeff=0.1682;MQ=76.57;MQ0=6;MQRankSum=-0.772;QD=6.20;ReadPosRankSum=2.591;VQSLOD=1.6526;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:22,3:28:19.86:115,20,0	0/0:4,0:4:0:0,0,0	0/1:23,0:15:17.70:18,0,105	0/1:18,0:13:0.66:1,0,8	1/1:10,5:16:8.93:69,9,0	1/1:10,2:13:15.98:102,16,0	1/1:7,14:25:51.96:351,52,0	0/0:12,0:12:0:0,0,0	0/1:7,4:11:20.93:38,0,21	1/1:12,4:16:11.92:93,12,0	1/1:7,5:15:18.97:128,19,0	0/1:13,2:18:9.49:65,0,9	0/1:3,3:7:19.11:41,0,19	1/1:10,2:14:19.11:98,19,0	1/1:6,7:14:19.95:144,20,0	1/1:9,4:16:24.02:156,24,0	1/1:6,4:16:22:122,22,0	1/1:3,7:16:31.10:192,31,0	0/1:7,0:7:15.61:70,0,16	1/1:3,3:10:15.06:87,15,0	1/1:11,2:13:8.16:53,8,0	1/1:5,5:12:21.04:134,21,0	1/1:8,4:12:8.90:66,9,0	0/0:6,0:6:5.69:0,6,57	1/1:8,3:14:14.10:70,14,0	0/1:11,1:12:19.46:41,0,19	1/1:8,9:19:27:179,27,0	0/0:5,0:5:0:0,0,0
chr10	64733366	.	CTG	C	14070.39	PASS	AB=0.514;AC=37;AF=0.661;AN=56;BaseQRankSum=13.099;DP=520;FS=0.000;HRun=0;HaplotypeScore=64.0275;InbreedingCoeff=0.9344;MQ=63.40;MQ0=5;MQRankSum=-0.155;QD=40.67;ReadPosRankSum=4.769;VQSLOD=6.6647;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:33:93.14:0,93,1766	1/1:0,10:10:24.08:367,24,0	0/0:12,0:7:15.05:0,15,290	0/0:15,0:10:23.11:0,23,372	0/0:15,0:15:45.13:0,45,834	1/1:0,23:23:60.20:918,60,0	1/1:0,20:20:54.18:827,54,0	0/0:38,0:38:99:0,108,1877	0/0:13,0:13:36.12:0,36,695	1/1:1,26:26:78.26:1189,78,0	1/1:0,18:18:51.14:756,51,0	1/1:0,18:18:54.18:827,54,0	0/0:11,0:11:33.11:0,33,637	1/1:0,22:21:63.21:965,63,0	1/1:1,19:20:51.17:781,51,0	0/1:1,18:19:3.75:727,0,4	1/1:0,37:37:99:1515,99,0	1/1:0,20:20:50.97:780,51,0	1/1:3,14:16:39.12:570,39,0	1/1:0,13:13:33.11:495,33,0	1/1:1,20:21:51.17:781,51,0	1/1:0,6:6:18.06:276,18,0	0/0:14,0:14:42.13:0,42,776	0/0:22,0:22:63.22:0,63,1208	1/1:0,17:17:48.16:735,48,0	1/1:0,16:16:48.16:735,48,0	1/1:1,16:17:42.14:643,42,0	1/1:0,5:5:12.04:184,12,0
chr10	64734293	.	ATCTGTCTG	A	851.26	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.808;DP=729;FS=1.110;HRun=0;HaplotypeScore=175.1709;InbreedingCoeff=0.9995;MQ=72.05;MQ0=2;MQRankSum=-5.846;QD=30.40;ReadPosRankSum=0.645;VQSLOD=3.5661;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:75.24:0,75,3068	0/0:17,0:17:48.16:0,48,2028	0/0:21,0:15:36.12:0,36,1174	0/0:36,0:35:63.08:0,63,2403	1/1:6,22:27:36.12:946,36,0	0/0:33,0:33:87.26:0,87,3328	0/0:22,0:22:51.18:0,51,2079	0/0:41,0:41:90.31:0,90,3644	0/0:23,0:23:63.22:0,63,2613	0/0:26,0:26:66.23:0,66,2591	0/0:27,0:27:69.24:0,69,2639	0/0:31,0:31:84.29:0,84,3441	0/0:28,0:28:75.23:0,75,3029	0/0:26,0:26:63.20:0,63,2529	0/0:22,0:22:57.17:0,57,2200	0/0:26,0:26:78.25:0,78,3072	0/0:24,0:24:66.23:0,66,2625	0/0:16,0:16:45.15:0,45,1840	0/0:27,0:27:42.13:0,42,1560	0/0:34,0:34:90.31:0,90,3645	0/0:21,0:21:45.15:0,45,1859	0/0:23,0:23:63.22:0,63,2525	0/0:20,0:20:60.21:0,60,2429	0/0:25,0:24:57.17:0,57,2216	0/0:29,0:29:72.25:0,72,3039	0/0:29,0:29:66.23:0,66,2793	0/0:26,0:26:75.26:0,75,3133	0/0:16,0:16:36.12:0,36,1513
chr10	64734733	.	GA	G	14178.13	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=8.717;DP=630;FS=11.224;HRun=6;HaplotypeScore=63.5409;InbreedingCoeff=0.9962;MQ=81.56;MQ0=0;MQRankSum=-4.647;QD=27.53;ReadPosRankSum=2.416;VQSLOD=4.9577;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,31:32:84.21:902,84,0	1/1:1,10:11:30.07:322,30,0	0/0:20,0:19:45.54:0,46,540	0/0:13,0:13:26.96:0,27,313	1/1:1,32:33:90.12:940,90,0	1/1:0,23:23:66.17:709,66,0	1/1:1,12:13:27.07:290,27,0	1/1:2,14:16:42.08:435,42,0	0/0:17,0:17:48.16:0,48,631	1/1:0,25:25:75.19:806,75,0	1/1:3,24:27:66.16:709,66,0	1/1:3,27:30:78.19:838,78,0	0/0:25,0:25:69.18:0,69,863	1/1:0,19:19:57.14:612,57,0	1/1:1,26:27:69.17:741,69,0	1/1:0,21:21:60.15:645,60,0	1/1:2,19:21:54.14:580,54,0	1/1:1,16:17:42.11:452,42,0	1/1:0,20:20:60.09:613,60,0	1/1:1,30:31:84.17:889,84,0	1/1:1,24:25:66.16:709,66,0	1/1:1,25:26:60.14:645,60,0	0/0:18,0:18:51.16:0,51,657	0/0:22,0:22:60.18:0,60,774	1/1:2,19:21:45.11:483,45,0	1/1:2,23:25:69.15:731,69,0	1/1:3,36:39:90.23:967,90,0	1/1:0,13:13:15.04:161,15,0
chr10	64735860	.	GA	G	10232.43	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=17.534;DP=604;FS=9.463;HRun=2;HaplotypeScore=114.5428;InbreedingCoeff=0.9986;MQ=83.18;MQ0=0;MQRankSum=-3.618;QD=26.30;ReadPosRankSum=3.260;VQSLOD=3.7714;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:96.26:0,96,1392	1/1:2,14:16:44.25:402,44,0	0/0:20,0:19:54.18:0,54,790	0/0:21,0:21:51.61:0,52,742	0/0:22,0:22:66.22:0,66,989	1/1:0,18:18:42.02:393,42,0	1/1:1,14:15:42.05:419,42,0	0/0:41,0:41:99:0,117,1742	0/0:19,0:19:57.19:0,57,851	1/1:2,22:24:72.12:738,72,0	1/1:1,15:16:42.06:422,42,0	1/1:2,24:26:67.10:674,67,0	0/0:23,0:23:66.22:0,66,989	1/1:0,16:16:39.06:391,39,0	1/1:1,16:17:51.07:498,51,0	1/1:3,17:20:47.99:438,48,0	1/1:4,28:32:84.01:808,84,0	1/1:7,16:23:60.07:597,60,0	1/1:1,19:20:57.07:548,57,0	1/1:3,28:30:84.10:816,84,0	1/1:2,23:25:57.12:584,57,0	1/1:4,9:13:33.04:338,33,0	0/0:22,0:22:63.20:0,63,926	0/0:15,0:15:45.14:0,45,655	1/1:0,14:14:39.05:387,39,0	1/1:0,23:23:69.11:703,69,0	1/1:3,31:34:96.08:915,96,0	1/1:0,6:6:18:161,18,0
chr10	64735863	.	CT	C	10106.53	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=17.820;DP=595;FS=7.939;HRun=2;HaplotypeScore=114.6063;InbreedingCoeff=0.9982;MQ=84.16;MQ0=0;MQRankSum=-4.990;QD=26.60;ReadPosRankSum=3.377;VQSLOD=4.0704;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,99,1459	1/1:2,14:16:36.16:386,36,0	0/0:20,0:20:48.11:0,48,668	0/0:20,0:20:23.87:0,24,763	0/0:23,0:23:69.22:0,69,1014	1/1:3,16:19:44.97:416,45,0	1/1:2,12:14:42.03:405,42,0	0/0:41,0:41:99:0,120,1762	0/0:17,0:17:51.16:0,51,746	1/1:3,22:25:72.06:720,72,0	1/1:1,14:15:42.04:410,42,0	1/1:3,23:26:71.29:672,71,0	0/0:23,0:23:69.18:0,69,988	1/1:1,15:16:39.04:378,39,0	1/1:2,16:18:51.06:498,51,0	1/1:1,17:18:47.98:435,48,0	1/1:5,28:33:86.97:827,87,0	1/1:4,16:20:57.04:559,57,0	1/1:2,18:20:60.04:570,60,0	1/1:0,29:29:81.10:791,81,0	1/1:2,21:23:57.10:571,57,0	1/1:1,9:10:30.03:299,30,0	0/0:22,0:22:66.21:0,66,969	0/0:15,0:15:45.15:0,45,671	1/1:0,14:14:39.05:387,39,0	1/1:1,23:24:72.12:741,72,0	1/1:4,30:34:95.85:879,96,0	1/1:0,6:6:18:161,18,0
chr10	64736015	.	A	AG	15850.70	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-11.027;DP=635;FS=0.673;HRun=1;HaplotypeScore=68.4951;InbreedingCoeff=0.9822;MQ=70.96;MQ0=0;MQRankSum=-3.330;QD=38.85;ReadPosRankSum=6.980;VQSLOD=4.6741;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:60.11:0,60,742	1/1:0,10:10:27.09:404,27,0	0/0:29,0:25:65.39:0,65,732	0/0:14,0:10:18.03:0,18,214	0/0:33,0:33:96.20:0,96,1195	1/1:4,15:19:54.12:758,54,0	1/1:0,15:15:42.14:629,42,0	0/0:34,0:34:87.26:0,87,1095	0/0:19,0:19:57.19:0,57,740	1/1:0,35:35:99:1527,102,0	1/1:0,21:21:60.20:898,60,0	1/1:0,18:18:39.13:584,39,0	0/0:27,0:27:81.25:0,81,1030	1/1:1,15:16:36.12:539,36,0	1/1:0,26:26:66.18:964,66,0	1/1:1,20:21:57.19:853,57,0	1/1:1,19:20:41.22:667,41,0	1/1:1,22:23:48.31:832,48,0	1/1:0,23:23:66.18:944,66,0	1/1:0,24:24:72.20:1053,72,0	1/1:2,23:25:51.13:739,51,0	1/1:1,15:16:42.06:595,42,0	0/0:22,0:22:66.20:0,66,843	0/0:25,0:25:75.24:0,75,973	1/1:1,32:33:84.28:1252,84,0	1/1:2,27:29:81.22:1176,81,0	1/1:0,32:32:90.30:1347,90,0	1/1:0,2:2:6.02:90,6,0
chr10	64736056	.	A	AG	3169.16	PASS	AB=0.751;AC=19;AF=0.339;AN=56;BaseQRankSum=15.024;DP=548;FS=21.398;HRun=1;HaplotypeScore=145.9334;InbreedingCoeff=-0.5213;MQ=56.57;MQ0=0;MQRankSum=-13.146;QD=8.90;ReadPosRankSum=-0.038;VQSLOD=-0.1633;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:17,5:22:62.91:63,0,463	0/1:6,5:11:99:152,0,163	0/0:26,0:23:66.62:0,67,771	0/0:16,0:14:40.28:0,40,435	0/0:28,0:28:84.27:0,84,1089	0/1:12,9:21:99:224,0,265	0/1:8,5:13:72.36:72,0,208	0/0:21,0:21:60.19:0,60,768	0/0:21,0:21:63.20:0,63,818	0/1:11,7:18:99:260,0,374	0/1:9,10:19:99:252,0,279	0/1:9,4:13:99:101,0,276	0/0:24,0:24:72.22:0,72,920	0/1:5,8:13:99:320,0,105	0/1:11,10:21:99:314,0,293	0/1:15,9:24:99:200,0,467	0/1:17,1:18:83.97:84,0,360	0/1:14,4:18:99:108,0,345	0/1:15,2:16:41.60:42,0,474	0/1:11,8:19:99:241,0,360	0/1:16,4:20:19.61:20,0,476	0/1:9,5:14:64.44:64,0,278	0/0:28,0:28:84.25:0,84,1064	0/0:26,0:26:78.24:0,78,997	0/1:17,7:24:97.18:97,0,527	0/1:13,10:23:99:418,0,384	0/1:20,8:28:99:298,0,572	0/0:2,0:2:5.99:0,6,61
chr10	64736076	.	AG	A	7948.89	PASS	AB=0.611;AC=27;AF=0.482;AN=56;BaseQRankSum=15.589;DP=527;FS=32.148;HRun=2;HaplotypeScore=145.4052;InbreedingCoeff=-0.0304;MQ=63.78;MQ0=0;MQRankSum=-10.531;QD=22.65;ReadPosRankSum=2.554;VQSLOD=2.7936;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:7,14:21:69.09:252,0,69	0/1:4,9:13:7.87:317,0,8	0/0:24,0:21:57.17:0,57,793	0/0:18,0:18:47.88:0,48,618	0/0:30,0:30:87.27:0,87,1259	1/1:4,25:29:26.21:720,26,0	1/1:3,10:13:7.37:363,7,0	0/1:6,9:15:45.07:297,0,45	0/0:21,0:21:63.21:0,63,942	1/1:3,12:15:36.12:467,36,0	0/1:4,14:18:1.20:391,0,1	1/1:5,11:16:22.15:486,22,0	0/0:25,0:25:75.24:0,75,1105	1/1:1,11:12:9.96:365,10,0	1/1:1,18:19:54.07:647,54,0	0/1:6,11:17:82.48:379,0,82	0/1:10,9:19:95.40:233,0,95	0/1:6,12:18:85.63:377,0,86	0/1:5,6:11:16.89:233,0,17	0/1:5,11:16:35.47:290,0,35	0/1:4,9:13:12.99:205,0,13	0/1:4,10:14:15.77:266,0,16	0/0:27,0:27:81.26:0,81,1191	0/0:31,0:31:90.30:0,90,1345	0/1:12,14:26:75.44:484,0,75	0/1:4,19:23:10.74:670,0,11	0/1:8,13:21:12.69:475,0,13	0/1:1,1:2:13.97:33,0,14
chr10	64738362	.	C	CTCCCTCCCTCCCTCCT	2663.80	PASS	AB=1.000;AC=39;AF=0.696;AN=56;BaseQRankSum=2.680;DP=266;FS=7.300;HRun=0;HaplotypeScore=115.6448;InbreedingCoeff=0.6172;MQ=70.92;MQ0=2;MQRankSum=-5.543;QD=15.67;ReadPosRankSum=-3.814;VQSLOD=-0.0636;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:18:36.07:0,36,1165	1/1:4,0:4:6.02:206,6,0	0/1:15,0:8:5.19:5,0,21	0/0:17,0:13:5.67:0,6,38	0/0:11,0:11:24.04:0,24,740	1/1:5,0:5:9.48:171,9,0	1/1:12,0:12:17.93:346,18,0	0/0:13,0:13:12.02:0,12,137	0/0:12,0:12:21.04:0,21,711	1/1:6,0:6:6.02:158,6,0	1/1:9,0:9:8.94:67,9,0	1/1:11,0:11:20.98:217,21,0	0/0:16,0:16:33.08:0,33,1133	1/1:6,0:6:8.96:246,9,0	1/1:12,0:12:9.03:276,9,0	1/1:11,0:11:15.02:402,15,0	1/1:7,0:7:9.42:93,9,0	1/1:5,0:5:8.98:92,9,0	1/1:10,0:9:6:51,6,0	1/1:2,0:2:0.47:1,0,0	1/1:15,0:15:8.99:74,9,0	1/1:4,0:4:5.80:39,6,0	0/0:8,0:8:21.03:0,21,568	0/1:9,0:9:38.79:39,0,533	1/1:5,3:12:4.26:232,4,0	1/1:8,0:8:9.89:83,10,0	1/1:4,0:4:5.99:50,6,0	0/1:3,0:3:0:0,0,0
chr10	64741392	.	T	TA	5017.24	PASS	AB=0.738;AC=42;AF=0.750;AN=56;BaseQRankSum=-4.104;DP=602;FS=2.487;HRun=13;HaplotypeScore=70.2799;InbreedingCoeff=0.5228;MQ=61.75;MQ0=24;MQRankSum=-1.821;QD=10.07;ReadPosRankSum=-0.778;VQSLOD=4.1801;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,29:37:36.48:478,36,0	0/1:5,5:9:11.56:47,0,12	0/0:17,0:11:4.28:0,4,53	0/1:15,1:8:10.13:10,0,55	1/1:12,0:22:7.49:105,7,0	1/1:11,20:33:3.66:270,4,0	1/1:6,10:17:24.34:210,24,0	1/1:5,31:34:51.08:555,51,0	0/0:21,0:19:29.64:0,30,204	1/1:6,15:20:41.97:369,42,0	1/1:2,11:12:18.02:167,18,0	1/1:9,11:19:20.90:182,21,0	0/0:27,4:30:13.47:0,13,236	1/1:18,5:23:12.87:222,13,0	1/1:4,15:18:3.44:174,3,0	1/1:7,15:22:23.86:209,24,0	1/1:12,19:30:1.77:295,2,0	1/1:10,14:22:33.27:283,33,0	0/1:7,5:12:26.15:60,0,26	1/1:12,12:24:15.12:240,15,0	0/1:6,8:14:2.56:121,0,3	1/1:9,10:19:19.10:157,19,0	0/0:19,0:21:30.28:0,30,193	0/0:13,0:11:14.81:0,15,103	1/1:8,16:22:18.02:167,18,0	1/1:4,11:14:25.15:204,25,0	1/1:20,8:25:19.99:297,20,0	1/1:1,9:9:21.02:195,21,0
chr10	64743597	.	ACAGGCACATGATGGCTCAGTCCT	A	35728.70	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=17.996;DP=591;FS=8.272;HRun=0;HaplotypeScore=329.1711;InbreedingCoeff=0.9501;MQ=89.41;MQ0=1;MQRankSum=-16.854;QD=102.96;ReadPosRankSum=6.145;VQSLOD=3.4213;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:93.32:0,93,8707	1/1:1,7:8:15.05:948,15,0	0/0:26,0:26:78.27:0,78,5496	0/0:29,0:29:75.26:0,75,5521	0/0:27,0:27:78.27:0,78,7513	1/1:0,20:20:27.09:1671,27,0	1/1:0,11:11:18.06:1085,18,0	0/0:38,0:38:99:0,105,8479	0/0:20,0:20:57.20:0,57,5928	1/1:2,32:34:78.25:4164,78,0	1/1:2,22:24:24.08:1438,24,0	1/1:0,19:19:39.13:2412,39,0	0/0:27,0:27:36.41:0,36,6854	1/1:1,18:19:36.12:2275,36,0	1/1:0,24:24:63.22:3947,63,0	1/1:0,16:16:30.57:1897,31,0	1/1:0,15:15:9.03:569,9,0	1/1:0,10:10:15.05:948,15,0	1/1:0,5:5:12.04:608,12,0	1/1:2,24:26:57.19:3247,57,0	1/1:1,15:16:15.05:858,15,0	1/1:0,19:19:27.09:1377,27,0	0/0:26,0:26:78.27:0,78,7481	0/0:18,0:18:54.19:0,54,5116	1/1:3,28:30:51.17:3171,51,0	1/1:1,29:29:69.22:3216,69,0	1/1:0,16:16:27.09:1707,27,0	1/1:0,4:4:3.01:190,3,0
chr10	64746393	.	GTGTATGTATGTA	G	959.11	PASS	AB=1.000;AC=17;AF=0.327;AN=52;BaseQRankSum=-6.074;DP=585;FS=3.560;HRun=0;HaplotypeScore=185.6375;InbreedingCoeff=0.0834;MQ=48.85;MQ0=49;MQRankSum=0.853;QD=3.54;ReadPosRankSum=-7.274;VQSLOD=0.5889;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:30:5.95:98,6,0	0/1:13,0:12:36.74:37,0,177	./.	./.	0/0:19,0:20:21.05:0,21,468	0/1:26,0:23:86.43:96,0,86	0/0:20,0:19:0:0,0,0	0/1:30,0:26:11.93:22,0,12	1/1:12,10:22:12.04:401,12,0	0/1:23,0:20:77.62:78,0,177	0/1:13,0:8:11.86:12,0,198	0/0:30,0:26:22.16:0,22,382	0/0:25,0:24:16.30:0,16,575	0/1:22,0:17:13.88:14,0,62	0/1:18,0:14:33.12:33,0,251	0/0:22,0:19:1.12:0,1,436	0/0:29,0:24:9.03:0,9,202	0/0:22,0:18:18.53:0,19,515	1/1:9,0:9:5.94:42,6,0	0/0:28,0:22:18.06:0,18,538	0/0:17,0:15:6.02:0,6,162	0/0:14,0:14:6.02:0,6,182	0/0:21,0:19:18.06:0,18,602	0/0:29,0:25:27.07:0,27,821	0/1:29,0:25:99:156,0,882	0/1:30,0:28:80.82:81,0,580	0/0:24,0:21:37.90:0,38,935	1/1:6,0:3:5.99:48,6,0
chr10	64746395	.	GTA	G	6747.45	PASS	AB=0.810;AC=43;AF=0.796;AN=54;BaseQRankSum=2.780;DP=584;FS=10.586;HRun=0;HaplotypeScore=99.2367;InbreedingCoeff=0.0968;MQ=49.09;MQ0=49;MQRankSum=-0.041;QD=12.16;ReadPosRankSum=2.468;VQSLOD=4.2013;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:28,1:29:9.86:10,0,137	1/1:5,7:11:8.09:268,8,0	0/0:3,0:1:3.01:0,3,34	./.	0/1:21,0:20:67.36:67,0,365	0/1:20,5:22:0.63:275,0,1	0/0:7,13:19:2.84:0,3,17	1/1:30,0:26:10.32:70,10,0	0/1:22,0:22:21.56:22,0,267	1/1:14,8:19:16.34:370,16,0	0/1:12,4:11:25.12:154,0,25	1/1:9,19:26:34.79:467,35,0	0/1:5,21:24:30.74:249,0,31	1/1:13,8:16:20.42:247,20,0	1/1:14,4:14:24.88:247,25,0	1/1:4,18:20:15.37:284,15,0	1/1:7,22:24:5.14:220,5,0	1/1:6,17:19:27.09:381,27,0	1/1:3,6:9:14.57:145,15,0	1/1:7,22:23:14.44:400,14,0	1/1:4,13:15:9.03:124,9,0	1/1:2,13:15:12.04:168,12,0	1/1:2,19:19:26.61:400,27,0	0/1:2,27:25:0.59:375,0,1	1/1:21,8:26:56.37:615,56,0	1/1:18,11:27:22.24:583,22,0	1/1:11,12:20:45.79:560,46,0	1/1:3,3:3:5.98:47,6,0
chr10	64746779	.	AAAACC	A	16201.24	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=11.767;DP=637;FS=6.471;HRun=0;HaplotypeScore=122.1109;InbreedingCoeff=0.9909;MQ=73.03;MQ0=2;MQRankSum=-3.883;QD=35.37;ReadPosRankSum=4.787;VQSLOD=4.4488;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,16:19:39.13:743,39,0	1/1:0,7:7:15.05:286,15,0	0/0:26,0:20:38.17:0,38,821	0/0:36,0:32:54.17:0,54,1334	0/0:27,0:27:57.20:0,57,1591	1/1:3,13:16:30.10:550,30,0	1/1:5,21:26:39.13:743,39,0	1/1:10,20:30:57.16:965,57,0	0/0:23,0:23:51.13:0,51,1255	1/1:1,26:27:78.19:1317,78,0	1/1:4,19:23:54.10:905,54,0	1/1:6,23:29:54.19:1029,54,0	0/0:26,0:26:63.18:0,63,1589	1/1:7,18:25:30.10:571,30,0	1/1:8,22:30:54.19:1029,54,0	1/1:4,17:21:39.05:739,39,0	1/1:7,16:23:33.11:629,33,0	1/1:2,16:18:36.12:686,36,0	1/1:5,13:17:36.07:558,36,0	1/1:7,20:27:60.11:1048,60,0	1/1:4,16:20:30.10:571,30,0	1/1:3,18:21:45.11:817,45,0	0/0:30,0:30:60.17:0,60,1512	0/0:11,0:11:27.01:0,27,714	1/1:4,14:18:33.11:629,33,0	1/1:5,24:29:72.21:1244,72,0	1/1:6,19:25:48.16:914,48,0	1/1:0,6:6:12.04:229,12,0
chr10	64750546	.	A	AAAACAAAC	17260.25	PASS	AB=1.000;AC=41;AF=0.732;AN=56;BaseQRankSum=-3.522;DP=597;FS=1.794;HRun=0;HaplotypeScore=140.5865;InbreedingCoeff=0.8447;MQ=63.01;MQ0=1;MQRankSum=-8.180;QD=39.77;ReadPosRankSum=-2.762;VQSLOD=4.4481;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:32,0:32:1.05:1,0,948	1/1:7,2:9:6.02:246,6,0	0/0:26,0:20:6.01:0,6,71	0/0:23,0:18:6.02:0,6,150	1/1:11,0:26:41.92:395,42,0	1/1:14,14:27:36.12:1474,36,0	1/1:17,3:21:15.05:485,15,0	0/0:33,0:33:33.09:0,33,621	0/0:25,0:25:36.12:0,36,896	1/1:13,12:26:48.16:1809,48,0	1/1:16,9:28:36.05:1118,36,0	1/1:13,9:23:27.09:1105,27,0	0/0:21,0:22:39.13:0,39,959	1/1:15,3:18:15.05:485,15,0	1/1:12,9:20:18.06:737,18,0	1/1:10,9:18:30.10:1172,30,0	1/1:14,3:18:9.02:299,9,0	1/1:14,6:24:35.95:1003,36,0	1/1:13,8:21:36.08:1123,36,0	1/1:9,7:18:30.08:852,30,0	1/1:13,2:15:9.03:282,9,0	1/1:3,6:9:12.04:490,12,0	0/0:13,0:13:15.05:0,15,376	0/0:21,0:21:24.07:0,24,551	1/1:10,8:18:30.10:1187,30,0	1/1:10,12:24:42.09:1349,42,0	1/1:19,6:27:36.12:1451,36,0	1/1:4,1:5:6.02:198,6,0
chr10	64751530	.	TAC	T	817.20	PASS	AB=0.834;AC=29;AF=0.659;AN=44;BaseQRankSum=3.125;DP=506;FS=6.761;HRun=0;HaplotypeScore=84.9912;InbreedingCoeff=0.2975;MQ=56.87;MQ0=12;MQRankSum=-0.434;QD=2.59;ReadPosRankSum=2.133;VQSLOD=1.2436;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:17.14:0,17,140	./.	./.	./.	0/1:18,0:20:0:0,0,0	1/1:25,1:26:8.94:83,9,0	1/1:19,3:21:18.78:169,19,0	./.	0/0:17,0:17:5.55:0,6,60	./.	0/1:12,2:13:25.70:26,0,27	1/1:15,0:14:9.43:74,9,0	0/0:14,0:14:5.97:0,6,45	1/1:11,0:11:0.47:1,0,0	1/1:14,1:15:3.01:32,3,0	0/0:12,0:12:15.02:0,15,154	1/1:18,7:27:14.70:123,15,0	1/1:20,0:20:11.97:99,12,0	./.	1/1:19,1:20:3:30,3,0	1/1:29,0:28:2.98:23,3,0	0/1:7,5:12:28.31:83,0,28	0/0:21,0:20:6.98:0,7,108	0/1:25,3:28:39.45:39,0,179	1/1:10,1:16:3.01:32,3,0	1/1:10,0:10:5.99:49,6,0	1/1:13,3:15:3.01:32,3,0	0/1:10,0:13:9.71:66,0,10
chr10	64751532	.	C	CAT	5929.13	PASS	AB=0.652;AC=43;AF=0.768;AN=56;BaseQRankSum=-2.678;DP=518;FS=17.568;HRun=0;HaplotypeScore=75.7416;InbreedingCoeff=0.8035;MQ=56.53;MQ0=14;MQRankSum=-1.785;QD=15.24;ReadPosRankSum=3.326;VQSLOD=3.0901;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:14,16:30:68.14:87,0,68	1/1:6,0:6:5.98:49,6,0	0/0:14,0:7:15.03:0,15,163	0/0:33,0:26:75.05:0,75,733	1/1:20,0:20:47.91:389,48,0	1/1:25,0:25:44.77:422,45,0	1/1:26,0:24:51.16:398,51,0	1/1:19,0:17:40.73:343,41,0	0/0:18,0:18:32.12:0,32,263	1/1:10,0:9:18.10:185,18,0	1/1:16,0:15:27.50:226,27,0	1/1:17,0:16:38.80:306,39,0	0/0:13,0:13:32.84:0,33,254	1/1:12,0:12:32.94:269,33,0	1/1:18,0:18:41.62:331,42,0	1/1:12,0:12:0.75:97,1,0	1/1:27,0:27:63.31:446,63,0	1/1:21,0:21:60.22:472,60,0	1/1:12,0:11:15.39:179,15,0	1/1:21,0:21:40.28:344,40,0	1/1:28,0:27:59.77:487,60,0	1/1:13,0:13:11.84:163,12,0	0/0:22,0:20:45.78:0,46,394	0/0:29,0:29:71.82:0,72,641	1/1:17,0:16:18.89:167,19,0	1/1:10,0:10:26.75:232,27,0	1/1:15,0:14:25.86:189,26,0	1/1:14,0:13:4.81:148,5,0
chr10	64751887	.	C	CT	19092.02	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-11.835;DP=615;FS=0.000;HRun=3;HaplotypeScore=55.4302;InbreedingCoeff=0.9982;MQ=73.93;MQ0=0;MQRankSum=-2.619;QD=37.73;ReadPosRankSum=0.491;VQSLOD=4.9738;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,32:34:90.30:1260,90,0	1/1:0,11:11:33.11:462,33,0	0/0:20,0:20:47.67:0,48,510	0/0:9,0:9:23.19:0,23,206	1/1:0,16:16:42.14:588,42,0	1/1:0,20:20:54.18:756,54,0	1/1:2,25:27:75.25:1050,75,0	1/1:3,32:35:96.31:1327,96,0	0/0:17,0:17:51.14:0,51,600	1/1:0,28:29:87.29:1215,87,0	1/1:0,18:18:54.18:756,54,0	1/1:1,30:31:84.28:1176,84,0	0/0:29,0:29:84.24:0,84,996	1/1:3,20:23:57.19:798,57,0	1/1:1,23:24:66.22:924,66,0	1/1:1,19:20:51.17:714,51,0	1/1:1,17:18:45.15:630,45,0	1/1:1,8:9:24.08:336,24,0	1/1:1,16:17:51.17:714,51,0	1/1:2,24:26:69.23:966,69,0	1/1:4,30:34:84.28:1176,84,0	1/1:0,18:18:48.16:672,48,0	0/0:14,0:14:39.11:0,39,456	0/0:20,0:20:60.18:0,60,720	1/1:2,17:19:41.97:588,42,0	1/1:1,21:22:63.21:882,63,0	1/1:1,47:48:99:1807,129,0	1/1:0,7:7:21.07:294,21,0
chr10	64752223	.	CA	C	746.40	PASS	AB=0.971;AC=5;AF=0.089;AN=56;BaseQRankSum=-3.692;DP=542;FS=4.452;HRun=7;HaplotypeScore=92.3127;InbreedingCoeff=0.7111;MQ=76.47;MQ0=6;MQRankSum=-1.172;QD=7.04;ReadPosRankSum=-1.716;VQSLOD=0.6579;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,20:22:60.13:612,60,0	0/0:9,0:9:21.04:0,21,231	0/0:73,1:32:2.28:0,2,267	0/1:65,2:27:14.75:15,0,132	0/0:16,0:16:38.90:0,39,449	0/0:24,0:24:62.33:0,62,593	0/0:12,0:12:29.99:0,30,285	1/1:6,10:16:26.89:248,27,0	0/0:8,0:8:19.29:0,19,216	0/0:15,0:15:38.89:0,39,378	0/0:23,0:23:63.88:0,64,622	0/0:13,0:13:35.85:0,36,305	0/0:12,0:12:30.08:0,30,362	0/0:15,0:15:23.89:0,24,216	0/0:11,0:11:21.01:0,21,203	0/0:16,0:15:45.08:0,45,466	0/0:17,0:17:48.02:0,48,480	0/0:10,0:10:21.02:0,21,228	0/0:18,0:18:35.92:0,36,362	0/0:31,0:31:89.19:0,89,875	0/0:9,0:9:26.26:0,26,258	0/0:9,0:9:20.25:0,20,190	0/0:12,0:12:36.10:0,36,440	0/0:6,0:6:18.06:0,18,226	0/0:18,0:18:41.75:0,42,422	0/0:21,0:21:54.11:0,54,582	0/0:24,0:24:52.26:0,52,484	0/0:12,0:12:35.74:0,36,349
chr10	64752229	.	AAC	A	2131.30	PASS	AB=0.983;AC=28;AF=0.500;AN=56;BaseQRankSum=1.923;DP=529;FS=3.602;HRun=0;HaplotypeScore=91.5664;InbreedingCoeff=0.3196;MQ=75.17;MQ0=8;MQRankSum=0.871;QD=7.18;ReadPosRankSum=8.006;VQSLOD=2.6292;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:21:56.93:0,57,292	0/1:9,0:9:19.18:19,0,34	0/0:78,0:27:30.59:0,31,320	0/0:60,0:24:2.27:0,2,116	0/0:15,0:15:25.55:0,26,168	1/1:23,2:25:31.97:250,32,0	1/1:10,0:10:2.64:89,3,0	0/0:13,0:14:25.07:0,25,149	0/0:8,0:8:20.94:0,21,258	0/1:13,0:13:1.22:81,0,1	0/1:22,3:25:10.79:219,0,11	1/1:13,0:13:33.13:179,33,0	0/0:12,0:12:36.05:0,36,481	0/1:14,0:14:2.64:88,0,3	1/1:10,0:10:17.61:75,18,0	0/1:15,0:14:2.56:102,0,3	1/1:17,0:17:12.20:127,12,0	0/1:8,0:8:29.98:30,0,46	0/1:14,1:15:40.47:71,0,40	1/1:32,1:33:27.20:316,27,0	0/1:10,0:10:10.69:40,0,11	1/1:7,1:8:15.99:91,16,0	0/0:13,0:13:39.03:0,39,514	0/0:6,0:6:18.04:0,18,254	0/1:18,0:18:14.36:106,0,14	1/1:20,0:20:15.76:124,16,0	1/1:21,1:22:21.94:223,22,0	0/1:12,0:12:13.87:91,0,14
chr10	64752234	.	ACC	A	7722.94	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-6.891;DP=537;FS=10.268;HRun=10;HaplotypeScore=75.0101;InbreedingCoeff=0.9415;MQ=77.13;MQ0=11;MQRankSum=1.039;QD=25.49;ReadPosRankSum=5.967;VQSLOD=3.6140;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:21:45.06:0,45,542	1/1:3,7:10:12.02:134,12,0	0/0:79,0:25:30.22:0,30,311	0/0:61,0:23:0.03:0,0,125	0/0:4,0:15:27.02:0,27,105	1/1:4,20:24:60.16:666,60,0	1/1:1,10:11:27.07:301,27,0	0/0:16,0:16:17.94:0,18,159	0/0:7,0:7:21.06:0,21,300	1/1:1,13:14:39.08:418,39,0	1/1:6,19:25:63.10:682,63,0	1/1:0,13:13:36.10:400,36,0	0/0:12,0:12:33.04:0,33,484	1/1:0,13:13:21.06:233,21,0	1/1:0,11:11:21.06:234,21,0	1/1:2,13:15:39.10:434,39,0	1/1:2,16:18:42.08:454,42,0	1/1:3,5:8:12.02:133,12,0	1/1:4,12:16:39.08:417,39,0	1/1:4,29:33:90.09:964,90,0	1/1:2,9:11:21.94:236,22,0	1/1:1,8:9:18.05:196,18,0	0/0:14,0:14:35.90:0,36,489	0/0:7,0:7:18.05:0,18,252	1/1:2,16:18:33.09:367,33,0	1/1:1,19:20:54.13:601,54,0	1/1:3,19:22:48.10:530,48,0	1/1:3,9:12:21.65:323,22,0
chr10	64752711	.	T	TCAAA	20245.99	PASS	AB=0.958;AC=45;AF=0.804;AN=56;BaseQRankSum=-10.797;DP=654;FS=14.026;HRun=0;HaplotypeScore=86.1007;InbreedingCoeff=0.8586;MQ=71.38;MQ0=2;MQRankSum=-1.205;QD=36.95;ReadPosRankSum=1.555;VQSLOD=4.2046;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:28:21.07:356,21,0	1/1:4,10:14:30.10:721,30,0	0/0:30,0:27:18.06:0,18,290	0/0:14,0:14:8.89:0,9,96	1/1:10,22:33:72.25:1658,72,0	1/1:4,14:18:30.10:714,30,0	1/1:4,8:13:24.08:577,24,0	1/1:18,11:29:42.10:904,42,0	0/1:22,1:23:32.98:33,0,540	1/1:9,22:32:66.20:1410,66,0	1/1:12,16:29:45.04:993,45,0	1/1:8,17:25:39.13:937,39,0	0/0:22,0:22:39.11:0,39,602	1/1:13,17:30:45.15:1079,45,0	1/1:8,17:26:42.14:1010,42,0	1/1:4,14:18:36.12:865,36,0	1/1:6,19:24:39.13:937,39,0	1/1:6,9:16:15.79:534,16,0	1/1:15,14:29:54.14:1142,54,0	1/1:6,19:29:60.20:1354,60,0	1/1:5,4:9:12.04:288,12,0	1/1:10,10:22:33.03:698,33,0	0/0:31,0:31:66.23:0,66,1061	0/0:9,0:9:24.08:0,24,386	1/1:9,24:34:60.20:1442,60,0	1/1:3,12:15:36.12:865,36,0	1/1:12,27:40:53.78:1297,54,0	1/1:4,6:10:18.06:432,18,0
chr10	64753492	.	T	TTAA	1017.81	PASS	AB=0.595;AC=24;AF=0.462;AN=52;BaseQRankSum=11.780;DP=390;FS=3.046;HRun=0;HaplotypeScore=88.3690;InbreedingCoeff=-0.1575;MQ=75.59;MQ0=2;MQRankSum=-3.910;QD=3.90;ReadPosRankSum=3.536;VQSLOD=1.7605;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:29:87.25:0,87,1446	./.	0/1:15,0:12:18.61:19,0,47	0/0:25,0:22:35.66:0,36,401	0/1:0,0:7:17.39:17,0,84	0/1:5,0:12:21.02:21,0,131	1/1:1,0:16:6.75:108,7,0	0/0:16,0:19:54:0,54,822	0/0:19,0:19:57.11:0,57,826	0/1:1,0:3:14.49:14,0,20	0/1:1,0:4:17:41,0,17	0/1:2,0:10:22.65:31,0,23	0/0:15,0:15:45.13:0,45,758	1/1:0,0:18:25.51:90,26,0	0/1:4,0:18:41.93:42,0,88	0/1:4,0:15:38.79:42,0,39	0/1:1,0:24:8.96:137,0,9	1/1:0,0:8:2.04:46,2,0	0/1:6,0:33:84.03:192,0,84	0/1:1,0:6:30.08:39,0,30	0/1:8,0:26:84.12:84,0,91	./.	0/0:2,0:2:2.97:0,3,26	0/0:19,0:19:54.12:0,54,883	1/1:0,0:7:12.14:54,12,0	1/1:2,1:14:3.37:77,3,0	0/1:5,0:15:20.42:119,0,20	0/1:1,0:8:7.60:8,0,27
chr10	64753630	.	GTGTA	G	1522.31	PASS	AB=0.952;AC=37;AF=0.771;AN=48;BaseQRankSum=1.101;DP=328;FS=1.510;HRun=0;HaplotypeScore=65.0526;InbreedingCoeff=0.4021;MQ=82.99;MQ0=8;MQRankSum=-0.344;QD=7.32;ReadPosRankSum=-1.690;VQSLOD=1.8618;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:26.97:0,27,301	1/1:3,2:5:3.01:46,3,0	./.	./.	./.	1/1:7,1:8:3.01:46,3,0	0/1:12,0:12:7.34:62,0,7	0/1:20,0:19:0:0,0,0	0/0:7,0:7:12.03:0,12,210	1/1:5,6:11:15.02:187,15,0	1/1:4,1:5:3.01:44,3,0	1/1:5,4:9:3.01:46,3,0	0/0:10,0:10:6.01:0,6,73	1/1:4,8:12:6.02:92,6,0	1/1:4,6:10:9.03:138,9,0	1/1:4,4:8:12.04:181,12,0	1/1:18,1:19:8.70:111,9,0	1/1:12,0:13:14.95:177,15,0	1/1:13,1:14:6.01:62,6,0	1/1:4,2:6:6.02:89,6,0	1/1:19,7:26:3.01:46,3,0	1/1:5,3:8:6.02:92,6,0	0/1:5,1:6:40.08:40,0,42	0/0:14,0:14:11.99:0,12,183	1/1:2,1:3:3.01:46,3,0	1/1:4,2:5:5.94:42,6,0	./.	1/1:7,0:7:11.99:119,12,0
chr10	64753739	.	T	TGC	2273.55	PASS	AB=1.000;AC=33;AF=0.750;AN=44;BaseQRankSum=-2.413;DP=143;FS=1.436;HRun=0;HaplotypeScore=25.0490;InbreedingCoeff=0.4821;MQ=78.72;MQ0=6;MQRankSum=0.402;QD=22.97;ReadPosRankSum=1.123;VQSLOD=3.6060;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,0:7:15.04:219,15,0	./.	0/0:13,0:5:2.91:0,3,47	0/1:25,0:8:11.56:12,0,42	./.	./.	1/1:3,0:3:9.01:122,9,0	1/1:4,9:13:26.12:423,26,0	0/0:1,0:1:3.01:0,3,45	0/0:1,0:1:0.47:0,0,1	./.	1/1:1,0:1:3.01:49,3,0	0/0:2,0:2:6:0,6,57	1/1:2,0:2:6.02:99,6,0	1/1:6,0:6:15.04:223,15,0	1/1:1,0:1:3:26,3,0	1/1:4,0:11:8.99:88,9,0	1/1:7,0:7:21.07:325,21,0	1/1:2,1:5:9:90,9,0	./.	1/1:2,0:2:6.02:96,6,0	1/1:3,0:3:9.03:149,9,0	0/0:6,0:6:18.06:0,18,272	./.	1/1:4,0:4:12.02:172,12,0	1/1:3,0:3:6.02:108,6,0	1/1:3,0:3:6.02:96,6,0	1/1:0,1:2:6.02:111,6,0
chr10	64756457	.	ATTTT	A	18284.11	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=14.200;DP=576;FS=0.693;HRun=4;HaplotypeScore=99.5913;InbreedingCoeff=0.9883;MQ=73.04;MQ0=1;MQRankSum=-4.511;QD=46.76;ReadPosRankSum=5.419;VQSLOD=2.4478;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:90.14:0,90,2138	1/1:0,10:10:21.07:439,21,0	0/0:18,0:18:44.19:0,44,1073	0/0:6,0:6:8.69:0,9,327	0/0:31,0:31:93.26:0,93,2471	1/1:0,27:27:66.17:1309,66,0	1/1:0,15:15:33.11:687,33,0	0/0:27,0:27:81.25:0,81,2082	0/0:17,0:17:51.14:0,51,1295	1/1:0,22:22:66.16:1133,66,0	1/1:0,27:27:71.66:1157,72,0	1/1:0,23:23:54.12:1081,54,0	0/0:20,0:20:60.19:0,60,1644	1/1:0,20:19:45.07:895,45,0	1/1:0,17:17:36.12:754,36,0	1/1:0,15:15:30.05:583,30,0	1/1:1,30:31:66.12:1333,66,0	1/1:0,23:23:54.19:1130,54,0	1/1:0,18:19:53.66:909,54,0	1/1:0,28:28:78.10:1476,78,0	1/1:0,12:12:24.01:404,24,0	1/1:0,10:10:20.99:394,21,0	0/0:24,0:24:72.17:0,72,1774	0/0:12,0:12:36.12:0,36,1042	1/1:0,22:22:54.12:1059,54,0	1/1:0,32:32:90.29:1835,90,0	1/1:0,29:29:62.70:1142,63,0	1/1:0,9:9:27.09:565,27,0
chr10	64756565	.	G	GA	9264.32	PASS	AB=0.781;AC=38;AF=0.679;AN=56;BaseQRankSum=1.133;DP=592;FS=0.747;HRun=10;HaplotypeScore=78.9437;InbreedingCoeff=0.8286;MQ=76.77;MQ0=1;MQRankSum=-1.398;QD=22.11;ReadPosRankSum=0.585;VQSLOD=5.5510;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,1:30:54.87:0,55,649	1/1:0,12:12:30.04:307,30,0	0/0:21,0:18:16.22:0,16,123	0/1:17,0:14:16.60:17,0,71	0/0:1,0:24:42.76:0,43,124	1/1:6,18:24:49.01:513,49,0	0/1:4,14:18:0.17:342,0,0	0/0:23,1:24:36.92:0,37,507	0/0:13,0:14:10.52:0,11,225	1/1:7,15:23:56.97:583,57,0	1/1:7,15:23:54.04:556,54,0	1/1:3,18:21:45.11:478,45,0	0/0:23,0:23:62.91:0,63,517	1/1:3,24:27:66.17:703,66,0	1/1:1,20:21:51.13:544,51,0	1/1:3,22:25:13.87:558,14,0	1/1:9,22:31:81.19:855,81,0	1/1:6,13:19:39.10:416,39,0	1/1:4,16:20:51.11:530,51,0	1/1:6,13:19:38.97:389,39,0	1/1:3,14:17:33.08:352,33,0	1/1:7,14:21:42.06:434,42,0	0/0:23,0:23:60.40:0,60,493	0/0:14,0:14:41.93:0,42,341	1/1:6,18:25:4.68:445,5,0	1/1:7,23:30:66.12:684,66,0	1/1:4,18:22:48.06:497,48,0	1/1:4,0:4:6.02:63,6,0
chr10	64757472	.	CAAAAGAAAAAAA	C	17485.92	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=16.494;DP=536;FS=0.371;HRun=0;HaplotypeScore=355.3267;InbreedingCoeff=0.8906;MQ=73.77;MQ0=1;MQRankSum=-14.545;QD=53.97;ReadPosRankSum=9.231;VQSLOD=2.6677;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:18:36.11:0,36,1899	1/1:9,3:12:27.08:767,27,0	0/0:20,0:18:1.89:0,2,1670	0/0:20,0:20:48.05:0,48,1717	0/0:34,0:34:93.32:0,93,5188	1/1:11,3:14:30.10:903,30,0	1/1:18,0:18:30.08:709,30,0	0/0:41,0:40:99:0,117,6878	0/0:15,0:15:36.12:0,36,2144	1/1:19,6:25:57.10:1486,57,0	1/1:16,4:20:39.13:1174,39,0	1/1:16,1:17:21.07:628,21,0	0/0:11,0:11:33.11:0,33,1941	1/1:7,6:13:33.06:883,33,0	1/1:13,2:15:30.10:915,30,0	1/1:20,3:23:27.09:815,27,0	1/1:5,0:5:6.01:116,6,0	1/1:8,1:9:6.02:178,6,0	1/1:8,2:10:18.06:547,18,0	1/1:19,13:32:75.20:2156,75,0	1/1:7,0:7:3.01:88,3,0	1/1:15,2:17:39.13:1171,39,0	0/0:30,0:30:90.31:0,90,5073	0/0:21,0:20:60.21:0,60,3623	1/1:23,7:30:54.17:1607,54,0	1/1:19,7:26:57.14:1694,57,0	1/1:19,6:25:48.16:1471,48,0	1/1:5,1:6:6.02:177,6,0
chr10	64757474	.	AAAGAAAAAAAAATGACAAGCTTT	A	31850.87	PASS	AB=0.800;AC=37;AF=0.661;AN=56;BaseQRankSum=16.151;DP=416;FS=0.000;HRun=0;HaplotypeScore=360.6230;InbreedingCoeff=0.8420;MQ=80.11;MQ0=1;MQRankSum=-15.010;QD=155.37;ReadPosRankSum=9.281;VQSLOD=3.5346;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:19:39.12:0,39,3067	1/1:4,5:9:27.09:1400,27,0	0/0:18,0:16:4.83:0,5,2385	0/0:21,0:20:45.84:0,46,2249	0/0:33,0:33:93.32:0,93,8476	1/1:3,7:10:30.10:1629,30,0	1/1:2,8:10:30.10:1481,30,0	0/0:40,0:39:99:0,120,10969	0/0:14,0:14:36.12:0,36,3462	1/1:6,9:19:57.18:2695,57,0	1/1:4,9:13:39.13:2104,39,0	1/1:1,6:7:21.07:1209,21,0	0/0:11,0:11:33.11:0,33,3382	1/1:8,3:11:33.11:1605,33,0	1/1:2,8:10:30.10:1716,30,0	1/1:3,6:9:27.09:1474,27,0	1/1:1,1:2:6.02:230,6,0	0/1:3,1:4:25.24:352,0,25	1/1:2,4:6:18.06:1054,18,0	1/1:16,9:25:75.24:3618,75,0	1/1:0,1:1:3.01:180,3,0	1/1:3,11:14:39.13:2248,39,0	0/0:32,0:32:96.33:0,96,9013	0/0:22,0:21:63.22:0,63,6443	1/1:8,10:18:54.17:2803,54,0	1/1:8,11:19:57.20:3108,57,0	1/1:6,10:16:48.16:2637,48,0	1/1:1,1:2:6.02:310,6,0
chr10	64757487	.	TGACAA	T	7764.54	PASS	AB=0.750;AC=37;AF=0.661;AN=56;BaseQRankSum=16.665;DP=408;FS=5.268;HRun=0;HaplotypeScore=293.1712;InbreedingCoeff=0.8514;MQ=71.02;MQ0=1;MQRankSum=-15.433;QD=40.23;ReadPosRankSum=11.377;VQSLOD=3.1236;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:15:27.05:0,27,793	1/1:5,3:8:24.08:347,24,0	0/0:17,0:16:34.51:0,35,904	0/0:21,0:19:39.07:0,39,997	0/0:33,0:33:90.22:0,90,2547	1/1:7,3:10:30.10:389,30,0	1/1:8,0:8:21.54:267,22,0	0/0:49,0:45:99:0,138,4368	0/0:14,0:14:36.11:0,36,974	1/1:13,6:19:45.15:660,45,0	1/1:9,4:13:39.08:492,39,0	1/1:6,1:7:21.07:281,21,0	0/0:11,0:11:33.11:0,33,1037	1/1:3,6:9:27.09:400,27,0	1/1:8,2:10:30.10:418,30,0	1/1:6,3:9:27.09:361,27,0	1/1:1,0:1:3.01:41,3,0	0/1:2,1:3:24.37:75,0,24	1/1:4,2:6:18.06:257,18,0	1/1:10,13:23:69.21:919,69,0	1/1:1,0:1:3.01:39,3,0	1/1:11,2:13:39.13:524,39,0	0/0:30,0:30:90.31:0,90,2893	0/0:22,0:21:59.59:0,60,1880	1/1:10,7:17:51.17:740,51,0	1/1:11,7:18:54.18:794,54,0	1/1:10,6:16:48.16:682,48,0	1/1:1,1:2:6.02:76,6,0
chr10	64757497	.	T	TC	1845.56	PASS	AB=0.953;AC=27;AF=0.482;AN=56;BaseQRankSum=11.356;DP=513;FS=4.340;HRun=0;HaplotypeScore=360.0497;InbreedingCoeff=0.3682;MQ=53.31;MQ0=5;MQRankSum=-11.861;QD=6.79;ReadPosRankSum=0.058;VQSLOD=2.8486;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:18:19.78:0,20,311	1/1:14,0:14:4.02:116,4,0	0/0:26,0:20:44.94:0,45,543	0/0:22,0:15:32.07:0,32,438	0/0:36,0:36:88.19:0,88,1250	0/1:18,0:18:20.29:58,0,20	0/0:11,0:10:6.27:0,6,56	0/0:49,0:45:99:0,133,1814	0/0:12,0:12:30.09:0,30,402	1/1:23,0:23:14.74:137,15,0	0/1:21,0:21:25.88:106,0,26	0/1:7,2:9:6.94:60,0,7	0/0:12,0:12:36.11:0,36,488	1/1:9,8:17:28.86:292,29,0	0/1:15,0:15:7.16:73,0,7	0/1:16,0:16:12.68:101,0,13	1/1:4,0:4:9.66:38,10,0	1/1:3,0:3:1.61:21,2,0	1/1:11,0:10:13.73:54,14,0	0/1:28,0:28:9.02:155,0,9	0/1:2,0:2:0.58:13,0,1	0/1:13,6:19:24.88:178,0,25	0/0:27,0:27:81.27:0,81,1125	0/0:24,1:24:69.21:0,69,931	1/1:17,9:26:16.56:313,17,0	1/1:23,0:23:10.39:174,10,0	1/1:21,0:21:8.13:133,8,0	0/1:2,0:2:0.86:11,0,1
chr10	64757499	.	TC	T	6476.67	PASS	AB=0.750;AC=37;AF=0.661;AN=56;BaseQRankSum=17.101;DP=508;FS=6.105;HRun=2;HaplotypeScore=313.5033;InbreedingCoeff=0.8962;MQ=52.38;MQ0=6;MQRankSum=-14.665;QD=22.81;ReadPosRankSum=7.867;VQSLOD=3.1868;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:17:9.91:0,10,262	1/1:11,3:14:38.81:326,39,0	0/0:25,0:18:42.04:0,42,541	0/0:23,0:15:36.52:0,37,475	0/0:36,0:36:99:0,100,1288	1/1:15,3:18:53.47:418,53,0	1/1:11,0:10:23.22:193,23,0	0/0:46,0:42:99:0,104,1588	0/0:11,0:11:24.08:0,24,355	1/1:15,6:21:62.82:571,63,0	1/1:17,4:21:61.99:465,62,0	1/1:8,1:9:22.98:182,23,0	0/0:11,0:11:33.11:0,33,488	1/1:11,6:17:35.92:315,36,0	1/1:13,2:15:44.67:356,45,0	1/1:13,3:16:47.57:379,48,0	1/1:4,0:4:8.90:63,9,0	0/1:2,1:3:3.20:50,0,3	1/1:10,2:10:29.84:252,30,0	1/1:15,13:28:80.18:750,80,0	1/1:3,0:3:5.83:38,6,0	1/1:17,2:19:45.32:344,45,0	0/0:27,0:27:81.27:0,81,1189	0/0:25,0:24:68.89:0,69,979	1/1:20,7:27:59.94:527,60,0	1/1:16,7:23:68.84:627,69,0	1/1:15,6:21:62.69:557,63,0	1/1:1,1:2:6:63,6,0
chr10	64757500	.	C	CT	6766.22	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=16.632;DP=516;FS=8.415;HRun=5;HaplotypeScore=317.4662;InbreedingCoeff=0.9238;MQ=52.29;MQ0=6;MQRankSum=-14.802;QD=23.33;ReadPosRankSum=7.842;VQSLOD=0.3429;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:19,2:18:19.91:0,20,300	1/1:9,5:14:22.46:182,22,0	0/0:25,0:18:42.13:0,42,553	0/0:23,0:15:27.63:0,28,453	0/0:36,0:36:80.85:0,81,1250	1/1:4,15:19:57.04:566,57,0	1/1:3,8:10:14.91:171,15,0	0/0:44,2:42:79.94:0,80,1615	0/0:11,0:11:24.08:0,24,336	1/1:6,15:21:62.90:637,63,0	1/1:4,17:21:62.43:573,62,0	1/1:3,6:9:23.16:183,23,0	0/0:11,0:11:33.11:0,33,461	1/1:14,3:17:37.63:242,38,0	1/1:2,13:15:43.78:401,44,0	1/1:3,13:16:48.06:485,48,0	1/1:1,4:5:9.02:102,9,0	1/1:2,2:4:2.08:48,2,0	1/1:4,8:10:30.05:331,30,0	1/1:14,15:29:78.56:669,79,0	1/1:1,2:3:6.01:60,6,0	1/1:8,11:19:52.55:395,53,0	0/0:28,0:28:81.27:0,81,1129	0/0:25,0:24:68.47:0,68,962	1/1:17,10:27:54.75:384,55,0	1/1:8,16:24:66.93:679,67,0	1/1:7,15:22:65.55:605,66,0	1/1:1,1:2:6:53,6,0
chr10	64757504	.	TCC	T	8174.71	PASS	AB=0.875;AC=39;AF=0.696;AN=56;BaseQRankSum=16.298;DP=528;FS=1.126;HRun=3;HaplotypeScore=321.0829;InbreedingCoeff=0.8476;MQ=50.66;MQ0=6;MQRankSum=-13.730;QD=25.47;ReadPosRankSum=7.627;VQSLOD=3.1640;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:18,2:18:75.43:75,0,294	1/1:4,10:14:35.03:351,35,0	0/0:22,0:16:42.14:0,42,752	0/0:23,0:15:28.70:0,29,673	0/0:37,0:37:99:0,101,1740	1/1:5,15:20:56.62:547,57,0	1/1:0,11:10:25.69:340,26,0	0/0:45,2:43:71.72:0,72,1889	0/0:10,0:10:24.08:0,24,457	1/1:6,15:21:59.73:617,60,0	1/1:6,17:23:62.26:590,62,0	1/1:1,8:9:22.14:294,22,0	0/0:12,0:12:36.12:0,36,686	1/1:6,11:17:46.49:446,46,0	1/1:2,13:15:39.76:440,40,0	1/1:4,12:16:44.23:433,44,0	1/1:1,4:5:8.97:87,9,0	1/1:3,2:5:3.27:95,3,0	1/1:4,8:10:30.03:353,30,0	1/1:14,15:29:64.51:676,65,0	1/1:3,2:5:5.93:60,6,0	1/1:2,17:19:54.26:609,54,0	0/0:30,0:30:87.26:0,87,1629	0/0:24,1:24:66.09:0,66,1260	1/1:10,19:29:72.88:713,73,0	1/1:8,16:24:58.79:690,59,0	1/1:9,15:24:63.22:692,63,0	1/1:1,1:2:5.99:66,6,0
chr10	64757509	.	TTC	T	2706.30	PASS	AB=1.000;AC=33;AF=0.589;AN=56;BaseQRankSum=16.201;DP=565;FS=4.298;HRun=0;HaplotypeScore=349.4592;InbreedingCoeff=0.6570;MQ=48.65;MQ0=6;MQRankSum=-11.153;QD=8.01;ReadPosRankSum=7.628;VQSLOD=2.3702;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:20:14.04:0,14,262	1/1:14,0:14:32.92:158,33,0	0/0:22,0:16:39.08:0,39,530	0/0:22,0:14:30.99:0,31,447	0/0:40,0:40:98.31:0,98,1263	1/1:23,0:23:17.47:160,17,0	0/1:15,0:13:23.07:51,0,23	0/0:47,0:43:99:0,120,1782	0/0:9,0:9:21.07:0,21,283	1/1:24,0:24:50.74:273,51,0	1/1:21,2:23:34.65:176,35,0	0/1:12,0:12:0.89:82,0,1	0/0:12,0:12:33.11:0,33,557	1/1:18,0:18:20.16:218,20,0	1/1:17,0:17:29.06:152,29,0	1/1:17,0:17:24.38:116,24,0	1/1:5,0:5:5.44:34,5,0	0/1:13,0:13:51.07:76,0,51	0/1:14,0:11:4.82:118,0,5	1/1:30,0:30:46.84:277,47,0	1/1:5,0:5:3.62:11,4,0	1/1:21,0:21:16.59:136,17,0	0/0:30,0:30:90.29:0,90,1508	0/0:23,0:22:54.07:0,54,931	1/1:31,2:33:45.31:298,45,0	1/1:26,0:26:46.27:268,46,0	1/1:24,0:24:48.64:298,49,0	0/1:4,0:4:6.27:9,0,6
chr10	64757511	.	C	CTT	9369.14	PASS	AB=0.717;AC=36;AF=0.643;AN=56;BaseQRankSum=15.121;DP=567;FS=0.701;HRun=3;HaplotypeScore=332.6164;InbreedingCoeff=0.6540;MQ=44.43;MQ0=7;MQRankSum=-10.615;QD=26.10;ReadPosRankSum=7.461;VQSLOD=2.9657;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:20:13.51:0,14,209	1/1:6,8:14:36.81:379,37,0	0/0:20,0:14:39.08:0,39,530	0/0:20,0:12:30.99:0,31,447	0/0:39,0:39:77.43:0,77,672	1/1:9,13:25:37.25:608,37,0	0/1:12,3:13:19.84:104,0,20	0/0:46,0:42:99:0,120,1753	0/1:4,0:9:25.74:26,0,161	1/1:13,10:25:66.97:816,67,0	1/1:11,9:23:66.70:737,67,0	1/1:8,5:13:7.72:245,8,0	0/0:11,0:11:33.11:0,33,502	1/1:5,14:19:56.35:669,56,0	1/1:8,9:17:45.83:478,46,0	1/1:8,6:17:48.35:466,48,0	1/1:2,4:6:12.03:145,12,0	0/1:4,9:13:4.98:143,0,5	1/1:9,6:11:0.48:276,0,0	1/1:10,14:30:87.11:1018,87,0	1/1:4,1:5:5.38:63,5,0	1/1:12,9:23:58.29:517,58,0	0/0:30,0:30:90.29:0,90,1345	0/0:19,1:19:54.07:0,54,822	1/1:17,16:33:80.80:1093,81,0	1/1:11,17:28:67.71:827,68,0	1/1:11,11:25:62.35:717,62,0	0/1:3,0:4:5.94:42,0,6
chr10	64757515	.	T	TTCTTTC	3642.72	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=-4.890;DP=582;FS=2.212;HRun=0;HaplotypeScore=395.6092;InbreedingCoeff=-0.1574;MQ=44.16;MQ0=7;MQRankSum=-1.990;QD=10.71;ReadPosRankSum=1.040;VQSLOD=1.1034;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:21,0:19:57.48:172,0,57	0/0:14,0:14:36.74:0,37,186	0/0:20,0:13:5.20:0,5,333	0/0:18,0:11:24.08:0,24,343	1/1:4,36:42:93.31:2206,93,0	0/1:25,0:25:24.04:24,0,138	0/0:15,0:13:0.28:0,0,137	0/1:51,0:47:99:837,0,304	0/1:9,0:9:61.60:62,0,150	0/1:25,0:25:40.99:41,0,119	0/1:23,0:23:92.14:92,0,145	0/1:13,0:13:1.70:2,0,154	0/0:11,0:11:30.10:0,30,547	0/0:21,0:21:48.17:0,48,379	0/0:17,0:17:14.37:0,14,183	0/1:17,0:17:16.43:16,0,64	0/1:6,0:6:9.25:9,0,13	0/0:13,0:13:16.01:0,16,148	0/1:17,0:13:27.21:27,0,121	0/1:31,0:31:90.30:90,0,218	1/1:5,0:5:2.60:16,3,0	0/0:23,0:23:48.78:0,49,319	0/0:31,0:31:81.25:0,81,1492	0/0:20,0:19:54.65:0,55,1019	0/0:34,0:34:53.50:0,53,419	0/1:29,0:29:10.26:10,0,194	0/1:26,0:26:38.36:38,0,199	0/0:4,0:4:3.48:0,3,16
chr10	64757519	.	T	TTC	1718.91	PASS	AB=0.854;AC=5;AF=0.089;AN=56;BaseQRankSum=-6.666;DP=588;FS=7.582;HRun=0;HaplotypeScore=357.5663;InbreedingCoeff=-0.1194;MQ=44.04;MQ0=8;MQRankSum=0.750;QD=13.22;ReadPosRankSum=-0.704;VQSLOD=2.3705;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:9,11:19:99:129,0,198	0/0:14,0:14:39.12:0,39,481	0/0:20,0:13:5.20:0,5,333	0/0:18,0:9:24.08:0,24,343	0/1:42,0:42:63.72:843,0,64	0/0:27,0:27:68.28:0,68,634	0/0:15,0:13:34.73:0,35,413	0/1:17,25:39:99:786,0,449	0/1:10,0:10:17.17:17,0,151	0/0:25,0:25:66.22:0,66,655	0/0:24,0:24:33.42:0,33,602	0/0:15,0:15:29.56:0,30,417	0/0:10,0:10:30.10:0,30,429	0/0:22,0:22:65.96:0,66,764	0/0:17,0:17:47.95:0,48,516	0/0:17,0:17:49.82:0,50,447	0/0:8,0:8:17.83:0,18,157	0/1:14,0:14:60.48:60,0,235	0/0:18,0:13:1.95:0,2,318	0/0:32,0:32:75.62:0,76,884	0/0:6,0:6:5.99:0,6,48	0/0:24,0:24:24.12:0,24,697	0/0:31,0:31:84.27:0,84,1169	0/0:21,0:20:57.18:0,57,799	0/0:34,0:34:99:0,100,1139	0/0:30,0:30:85.12:0,85,899	0/0:26,0:26:67.86:0,68,707	0/0:4,0:4:7.74:0,8,60
chr10	64758622	.	CT	C	9897.99	PASS	AB=1.000;AC=39;AF=0.696;AN=56;BaseQRankSum=1.534;DP=444;FS=8.189;HRun=2;HaplotypeScore=51.5946;InbreedingCoeff=0.9088;MQ=69.99;MQ0=0;MQRankSum=-1.626;QD=31.22;ReadPosRankSum=4.301;VQSLOD=3.7861;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:17.77:0,18,153	1/1:0,9:9:21.07:272,21,0	0/1:9,0:8:6.72:7,0,135	0/0:8,0:8:11.50:0,12,120	0/0:22,0:22:59.56:0,60,518	1/1:1,22:23:66.21:853,66,0	1/1:0,10:10:12.04:155,12,0	0/0:24,0:24:68.99:0,69,668	0/0:15,0:15:45.13:0,45,630	1/1:0,18:18:48.11:591,48,0	1/1:0,20:20:57.18:730,57,0	1/1:0,11:11:30.10:388,30,0	0/0:14,0:14:42.06:0,42,562	1/1:0,19:19:51.16:654,51,0	1/1:0,18:18:39.13:504,39,0	1/1:0,13:13:33.11:427,33,0	1/1:0,11:11:27.09:349,27,0	1/1:0,16:16:42.14:543,42,0	1/1:1,13:14:42.07:466,42,0	1/1:3,18:21:51.05:617,51,0	1/1:1,5:6:9.03:116,9,0	1/1:0,14:14:36.12:464,36,0	0/0:14,0:14:42.12:0,42,585	0/0:16,0:16:48.14:0,48,680	1/1:1,26:27:72.17:908,72,0	1/1:2,22:24:66.20:840,66,0	1/1:3,21:24:54.07:667,54,0	1/1:3,7:10:29.76:346,30,0
chr10	64759841	.	A	AT	2020.33	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-0.550;DP=664;FS=1.154;HRun=1;HaplotypeScore=62.5304;InbreedingCoeff=0.9954;MQ=87.78;MQ0=0;MQRankSum=-2.980;QD=37.41;ReadPosRankSum=-2.806;VQSLOD=2.9140;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,23:24:60.20:898,60,0	0/0:7,0:7:18.06:0,18,234	0/0:27,0:27:71.15:0,71,908	0/0:20,0:20:60.15:0,60,738	0/0:35,0:35:99:0,105,1362	0/0:34,0:34:96.28:0,96,1209	0/0:14,0:14:36.09:0,36,439	1/1:1,29:30:87.26:1244,87,0	0/0:23,0:23:63.20:0,63,817	0/0:26,0:26:72.22:0,72,911	0/0:24,0:24:72.22:0,72,920	0/0:12,0:12:30.10:0,30,385	0/0:23,0:23:69.22:0,69,895	0/0:32,0:32:96.30:0,96,1230	0/0:32,0:32:96.30:0,96,1233	0/0:26,0:26:75.23:0,75,959	0/0:17,0:17:42.11:0,42,519	0/0:27,0:27:81.22:0,81,1030	0/0:35,0:35:99:0,102,1284	0/0:33,0:33:99:0,99,1271	0/0:22,0:22:63.20:0,63,817	0/0:14,0:14:42.14:0,42,545	0/0:15,0:15:45.12:0,45,554	0/0:21,0:21:60.19:0,60,778	0/0:16,0:16:48.16:0,48,623	0/0:42,0:42:99:0,117,1488	0/0:22,0:22:66.21:0,66,856	0/0:11,0:11:33.09:0,33,411
chr10	64760709	.	TCA	T	10666.74	PASS	AB=0.713;AC=32;AF=0.571;AN=56;BaseQRankSum=5.558;DP=472;FS=5.594;HRun=0;HaplotypeScore=80.5200;InbreedingCoeff=0.5964;MQ=73.08;MQ0=6;MQRankSum=-4.986;QD=35.67;ReadPosRankSum=0.988;VQSLOD=7.1822;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:33.11:0,33,598	1/1:0,5:5:6.02:88,6,0	0/0:23,0:21:59.75:0,60,1114	0/0:26,0:17:44.86:0,45,806	0/0:21,0:21:63.18:0,63,1172	1/1:9,10:17:48.16:779,48,0	1/1:5,4:9:23.98:322,24,0	0/0:30,0:30:79.96:0,80,1570	0/0:9,0:9:24.08:0,24,449	0/1:7,10:16:8.55:637,0,9	1/1:11,8:19:54.17:836,54,0	1/1:9,6:15:42.11:622,42,0	0/0:20,0:19:54.18:0,54,1019	1/1:0,16:16:18.06:282,18,0	1/1:8,8:16:48.15:692,48,0	1/1:0,21:20:37.94:579,38,0	0/1:8,5:13:12.01:534,0,12	0/1:5,4:9:27.50:271,0,27	1/1:0,15:15:42.12:656,42,0	0/1:10,10:19:3.52:751,0,4	1/1:0,14:14:12.04:196,12,0	0/1:11,5:16:24.13:565,0,24	0/0:21,0:21:63.22:0,63,1242	0/0:11,0:11:33.11:0,33,635	1/1:14,14:28:26.44:1077,26,0	0/1:16,5:21:3.79:764,0,4	1/1:11,4:15:42.14:676,42,0	1/1:0,11:11:21.07:343,21,0
chr10	64760755	.	TCTCTCTCTCG	T	1704.62	PASS	AB=0.992;AC=28;AF=0.538;AN=52;BaseQRankSum=0.010;DP=440;FS=17.243;HRun=0;HaplotypeScore=151.9593;InbreedingCoeff=-0.0540;MQ=34.60;MQ0=38;MQRankSum=-3.386;QD=5.03;ReadPosRankSum=0.219;VQSLOD=1.1930;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:23,1:20:11.68:149,12,0	1/1:10,0:10:2.59:19,3,0	./.	./.	0/0:17,0:17:0.89:0,1,140	0/1:32,1:31:19.90:63,0,20	0/0:16,0:14:1.22:0,1,3	1/1:18,0:17:50.59:358,51,0	0/0:18,0:17:9.17:0,9,208	1/1:18,0:15:0.28:234,0,0	1/1:20,0:19:1.53:6,2,0	0/1:18,0:17:12.47:12,0,210	0/0:23,0:21:23.72:0,24,745	1/1:19,1:17:8.86:90,9,0	0/1:20,0:18:15.29:15,0,29	0/1:14,1:14:13.01:129,0,13	0/1:14,0:14:2.25:48,0,2	0/1:14,0:13:77.41:121,0,77	0/1:14,0:10:7.02:197,0,7	0/1:25,0:23:12.45:12,0,89	0/1:10,0:5:0:0,0,0	0/1:14,0:14:20.16:20,0,31	0/0:12,0:10:6.02:0,6,184	0/0:15,0:14:14.73:0,15,205	1/1:16,0:13:2.98:21,3,0	0/1:14,0:14:18.70:211,0,19	0/1:12,0:10:45.22:67,0,45	1/1:10,0:6:5.91:79,6,0
chr10	64760757	.	TCTCTCTCG	T	2196.38	PASS	AB=0.982;AC=32;AF=0.615;AN=52;BaseQRankSum=-0.575;DP=437;FS=16.955;HRun=0;HaplotypeScore=142.5740;InbreedingCoeff=0.2810;MQ=34.63;MQ0=39;MQRankSum=-2.753;QD=6.76;ReadPosRankSum=0.895;VQSLOD=1.2803;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:19:11.63:190,12,0	1/1:11,0:11:2.76:19,3,0	./.	./.	0/0:15,0:15:0.89:0,1,114	1/1:29,2:29:11.85:120,12,0	0/0:15,0:13:1.22:0,1,3	1/1:21,0:19:56.55:401,57,0	0/0:19,0:18:9.64:0,10,160	1/1:16,1:14:33.55:326,34,0	1/1:19,1:19:2.48:25,2,0	0/1:17,0:16:16.64:17,0,80	0/0:24,0:22:8.54:0,9,533	1/1:20,0:17:6.02:109,6,0	0/1:20,0:18:13.08:40,0,13	1/1:12,2:13:5.20:161,5,0	1/1:14,0:14:2.64:86,3,0	0/1:14,0:13:38.93:138,0,39	1/1:14,0:10:12.85:247,13,0	0/1:22,3:23:12.69:13,0,51	0/1:9,0:4:0:0,0,0	0/0:13,0:13:2.94:0,3,18	0/0:11,0:9:6.02:0,6,136	0/0:15,0:14:7.28:0,7,117	1/1:17,1:15:2.98:45,3,0	1/1:14,0:14:24.27:273,24,0	0/1:13,0:11:4.25:80,0,4	1/1:10,0:6:6.79:61,7,0
chr10	64760759	.	TCTCTCG	T	2564.50	PASS	AB=1.000;AC=37;AF=0.712;AN=52;BaseQRankSum=-0.346;DP=436;FS=20.129;HRun=0;HaplotypeScore=133.0505;InbreedingCoeff=0.2326;MQ=34.90;MQ0=39;MQRankSum=-2.735;QD=7.16;ReadPosRankSum=0.139;VQSLOD=1.4418;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:19:11.36:181,11,0	1/1:9,0:9:2.46:19,2,0	./.	./.	0/1:16,0:16:16:16,0,84	1/1:28,1:27:11.14:108,11,0	0/0:14,2:14:0.34:0,0,2	1/1:23,0:21:62.51:444,63,0	0/0:19,0:18:9.17:0,9,110	1/1:17,2:16:44.29:412,44,0	0/0:18,0:17:0.47:0,0,1	1/1:17,0:16:7.67:47,8,0	0/1:24,0:22:10.63:11,0,320	1/1:16,3:16:6.02:126,6,0	1/1:16,4:18:1.19:66,1,0	1/1:9,5:13:11.75:163,12,0	1/1:12,1:13:4.50:98,4,0	1/1:12,2:13:0.84:155,1,0	1/1:12,2:10:27.34:289,27,0	0/1:24,0:22:13.11:13,0,31	0/1:9,0:4:0:0,0,0	0/0:12,1:13:0:0,0,0	0/0:12,0:10:6.02:0,6,87	0/1:15,0:14:22.61:23,0,51	1/1:15,3:15:3.01:68,3,0	1/1:12,1:13:35.59:290,36,0	1/1:14,1:13:17.49:120,17,0	1/1:10,0:6:7.67:48,8,0
chr10	64760764	.	CGCTG	C	2923.31	PASS	AB=1.000;AC=43;AF=0.827;AN=52;BaseQRankSum=0.516;DP=435;FS=0.000;HRun=0;HaplotypeScore=119.7190;InbreedingCoeff=0.3484;MQ=35.25;MQ0=41;MQRankSum=-0.979;QD=7.35;ReadPosRankSum=-1.453;VQSLOD=2.3193;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:19:14.83:206,15,0	1/1:8,0:8:2.84:34,3,0	./.	./.	0/0:18,0:18:3.55:0,4,44	1/1:27,0:26:4.67:65,5,0	0/1:17,0:15:0.06:0,0,0	1/1:2,22:22:65.52:539,66,0	1/1:19,0:18:6.54:28,7,0	1/1:19,0:16:44.88:396,45,0	0/0:19,0:18:0.47:0,0,2	1/1:17,0:16:22.41:268,22,0	0/1:22,0:20:18.49:133,0,18	1/1:20,0:17:6.02:67,6,0	1/1:18,0:17:0.89:2,1,0	1/1:14,0:13:12.03:124,12,0	1/1:12,0:12:9.03:84,9,0	1/1:12,0:11:23.80:173,24,0	1/1:15,0:11:32.84:269,33,0	1/1:25,0:22:6.50:71,7,0	1/1:9,0:4:0.47:1,0,0	0/1:15,0:14:0:0,0,0	0/1:14,0:11:0.62:9,0,1	1/1:15,0:14:6.64:46,7,0	0/1:18,0:15:0:1,0,0	1/1:14,0:13:38.87:370,39,0	1/1:12,0:10:17.68:117,18,0	1/1:9,0:5:3.91:22,4,0
chr10	64760766	.	CTG	C	669.65	PASS	AB=1.000;AC=40;AF=0.769;AN=52;BaseQRankSum=0.047;DP=445;FS=3.837;HRun=0;HaplotypeScore=125.7501;InbreedingCoeff=0.3013;MQ=35.32;MQ0=40;MQRankSum=0.016;QD=1.79;ReadPosRankSum=2.665;VQSLOD=1.9791;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:20:8.76:70,9,0	1/1:8,0:8:2.88:15,3,0	./.	./.	0/0:19,0:19:2.39:0,2,24	1/1:27,0:26:4.98:29,5,0	0/1:18,0:16:0.04:0,0,0	1/1:24,0:22:5.38:64,5,0	1/1:8,10:17:6.02:66,6,0	1/1:19,0:16:11.35:57,11,0	0/0:21,0:20:0:0,0,0	1/1:17,0:16:5.52:29,6,0	1/1:20,0:19:17.88:179,18,0	1/1:21,0:18:2.94:18,3,0	0/1:19,0:18:0:0,0,0	1/1:13,0:12:5.72:29,6,0	1/1:12,0:12:2.64:14,3,0	1/1:12,0:11:2.18:15,2,0	1/1:15,0:11:2.84:14,3,0	1/1:25,0:22:5.73:30,6,0	1/1:9,0:5:0.47:1,0,0	0/0:16,0:15:0:0,0,0	0/0:8,6:11:0:0,0,0	1/1:8,7:14:3.01:33,3,0	0/1:18,0:16:0:0,0,0	1/1:16,0:15:17.11:91,17,0	1/1:13,0:11:2.22:7,2,0	0/1:11,0:6:2.08:2,0,12
chr10	64760796	.	GTGTGTGTGTA	G	2405.53	PASS	AB=0.980;AC=26;AF=0.464;AN=56;BaseQRankSum=3.198;DP=460;FS=7.123;HRun=0;HaplotypeScore=134.9325;InbreedingCoeff=0.4359;MQ=47.85;MQ0=29;MQRankSum=0.373;QD=9.15;ReadPosRankSum=2.032;VQSLOD=2.0378;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:18:23.75:0,24,483	1/1:10,0:10:3.01:67,3,0	0/0:17,0:8:17.16:0,17,245	0/0:16,0:5:8.06:0,8,89	0/0:18,0:18:15.86:0,16,280	1/1:20,2:22:4.40:172,4,0	0/0:7,9:15:0.89:0,1,2	0/0:28,0:27:80.99:0,81,1189	0/0:17,0:16:15.01:0,15,278	1/1:17,0:15:6.07:344,6,0	0/1:18,1:19:0.40:0,0,1	1/1:13,4:16:22.29:307,22,0	0/0:21,0:21:54.11:0,54,1209	1/1:24,0:22:20.96:204,21,0	0/0:21,0:20:0.47:0,0,1	1/1:12,0:11:18:225,18,0	0/1:7,1:8:10.19:108,0,10	0/1:12,0:12:25.63:186,0,26	1/1:4,1:4:8.95:149,9,0	1/1:24,0:21:17.65:125,18,0	0/1:11,0:7:0:0,0,0	0/1:22,0:21:0.05:0,0,0	0/0:11,0:10:2.98:0,3,22	0/0:12,0:11:12.02:0,12,340	0/1:12,0:11:0:0,0,0	0/1:23,0:22:61.26:549,0,61	1/1:16,0:15:2.57:58,3,0	0/1:9,0:6:48.52:79,0,49
chr10	64760798	.	GTGTGTGTA	G	2971.02	PASS	AB=0.704;AC=28;AF=0.500;AN=56;BaseQRankSum=2.160;DP=424;FS=1.258;HRun=0;HaplotypeScore=112.8026;InbreedingCoeff=0.5979;MQ=49.90;MQ0=24;MQRankSum=-0.501;QD=12.64;ReadPosRankSum=2.063;VQSLOD=2.4202;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:19:27.19:0,27,409	1/1:1,6:7:3.01:83,3,0	0/0:17,0:8:17.12:0,17,182	0/0:16,0:5:8.06:0,8,89	0/0:19,0:19:21.85:0,22,298	1/1:5,15:20:4.96:160,5,0	0/0:12,2:14:0.89:0,1,2	0/0:29,0:28:81.07:0,81,1040	0/0:16,0:15:15.01:0,15,227	1/1:4,10:12:26.50:461,26,0	0/1:5,13:18:0.13:0,0,1	1/1:14,2:15:26.46:355,26,0	0/0:20,0:20:48.09:0,48,896	1/1:19,1:19:23.98:277,24,0	0/0:4,11:14:0.47:0,0,1	1/1:8,2:9:21.02:309,21,0	1/1:7,1:8:11.57:134,12,0	1/1:10,0:10:20.85:210,21,0	1/1:4,1:4:12:155,12,0	1/1:17,3:18:19.59:195,20,0	0/1:11,0:7:0:0,0,0	0/1:1,19:20:0.01:0,0,0	0/0:11,0:10:2.98:0,3,22	0/0:12,0:11:12.02:0,12,262	0/1:2,9:10:0:0,0,0	0/1:6,16:21:10.54:628,0,11	1/1:0,14:13:2.51:77,3,0	0/1:9,0:6:26.91:101,0,27
chr10	64760800	.	GTGTGTA	G	2643.34	PASS	AB=0.879;AC=28;AF=0.500;AN=56;BaseQRankSum=2.771;DP=391;FS=0.584;HRun=0;HaplotypeScore=101.0467;InbreedingCoeff=0.6756;MQ=51.84;MQ0=22;MQRankSum=-1.133;QD=13.49;ReadPosRankSum=2.098;VQSLOD=2.7128;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:18:27.01:0,27,306	1/1:7,0:7:3.01:67,3,0	0/0:17,0:8:17.12:0,17,182	0/0:16,0:5:8.06:0,8,89	0/0:18,0:18:23.96:0,24,260	1/1:17,0:17:4.71:124,5,0	0/0:11,0:11:0.47:0,0,2	0/0:29,0:28:83.78:0,84,869	0/0:16,0:15:15.01:0,15,175	1/1:12,0:11:26.65:378,27,0	0/0:15,0:15:0.47:0,0,1	1/1:14,0:13:26.80:278,27,0	0/0:20,0:20:47.55:0,48,642	1/1:14,0:13:23.96:229,24,0	0/0:13,0:12:0.47:0,0,1	1/1:10,0:10:24.01:311,24,0	1/1:5,0:5:11.85:115,12,0	1/1:8,0:8:20.89:193,21,0	1/1:5,0:4:12:136,12,0	1/1:21,0:19:22.37:293,22,0	0/1:3,6:6:0:0,0,0	0/1:20,0:20:0.44:1,0,0	0/0:8,0:8:2.98:0,3,22	0/0:13,0:12:15.02:0,15,201	0/1:10,1:10:0:0,0,0	1/1:19,0:18:31.29:541,31,0	1/1:14,0:13:2.82:58,3,0	0/1:10,0:7:6.98:99,0,7
chr10	64762678	.	G	GT	4615.27	PASS	AB=0.677;AC=35;AF=0.625;AN=56;BaseQRankSum=-6.077;DP=696;FS=2.473;HRun=14;HaplotypeScore=84.3250;InbreedingCoeff=0.2641;MQ=69.30;MQ0=9;MQRankSum=0.244;QD=8.77;ReadPosRankSum=-0.041;VQSLOD=4.2330;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,28:36:15.50:240,15,0	1/1:4,9:13:17.95:151,18,0	0/0:47,0:17:8.46:0,8,104	0/0:40,0:23:5.67:0,6,116	0/0:12,0:29:7.34:0,7,54	0/1:6,11:18:11.61:146,0,12	0/1:17,1:19:1.05:1,0,113	1/1:25,7:38:33.73:357,34,0	0/0:15,0:16:7.91:0,8,155	1/1:11,20:33:53.22:419,53,0	1/1:4,13:17:9.68:172,10,0	1/1:5,22:27:15.47:133,15,0	0/1:13,1:14:22.70:23,0,124	1/1:23,4:27:26.99:304,27,0	0/1:8,16:26:3.02:191,0,3	1/1:3,12:16:24.72:200,25,0	0/1:6,17:24:18.48:204,0,18	1/1:1,15:16:18:158,18,0	1/1:11,13:25:4.59:288,5,0	1/1:7,28:35:51.52:522,52,0	1/1:9,10:19:11.29:85,11,0	1/1:5,16:22:40.84:295,41,0	0/0:25,0:25:36.66:0,37,308	0/0:8,4:12:0.24:0,0,126	0/1:11,14:25:7.46:180,0,7	0/1:12,16:28:54.89:243,0,55	0/1:9,26:36:11.48:251,0,11	0/1:3,8:12:11.18:55,0,11
chr10	64763973	.	T	TC	4235.46	PASS	AB=0.968;AC=45;AF=0.804;AN=56;BaseQRankSum=0.073;DP=490;FS=2.343;HRun=1;HaplotypeScore=152.8312;InbreedingCoeff=0.8238;MQ=52.59;MQ0=24;MQRankSum=-2.614;QD=10.11;ReadPosRankSum=0.957;VQSLOD=2.9023;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:18,2:20:22.14:183,22,0	1/1:6,1:7:11.45:94,11,0	0/1:29,0:9:3.63:4,0,28	0/0:20,0:7:4.95:0,5,61	1/1:19,0:19:19.37:155,19,0	1/1:24,1:23:32.70:253,33,0	1/1:12,1:13:11.35:77,11,0	1/1:21,0:18:20.94:186,21,0	0/0:10,0:10:20.84:0,21,155	1/1:21,0:20:35.78:296,36,0	1/1:24,0:23:38.42:302,38,0	1/1:16,0:16:14.83:105,15,0	0/0:21,0:21:40.01:0,40,309	1/1:20,0:20:31.70:236,32,0	1/1:16,0:14:21.31:159,21,0	1/1:15,0:15:32.74:248,33,0	1/1:12,0:12:17.94:143,18,0	1/1:1,1:1:3.01:32,3,0	1/1:16,0:10:11.92:96,12,0	1/1:30,0:29:44.44:344,44,0	1/1:13,0:11:32.80:257,33,0	1/1:17,1:18:29.19:233,29,0	0/0:11,0:11:17.91:0,18,141	0/0:8,0:8:17.98:0,18,148	1/1:28,0:26:35.75:274,36,0	1/1:17,0:16:17.63:143,18,0	1/1:25,0:23:35.48:280,35,0	1/1:11,0:8:17.45:136,17,0
chr10	64763993	.	A	ACC	6727.41	PASS	AB=0.757;AC=25;AF=0.446;AN=56;BaseQRankSum=6.353;DP=500;FS=54.581;HRun=0;HaplotypeScore=95.0435;InbreedingCoeff=-0.3646;MQ=55.02;MQ0=23;MQRankSum=-2.512;QD=17.66;ReadPosRankSum=5.690;VQSLOD=2.7058;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:15,5:20:99:197,0,248	0/1:4,1:6:58.82:116,0,59	0/0:36,0:9:13.95:0,14,218	0/0:27,0:11:11.43:0,11,169	0/1:14,4:18:99:262,0,140	0/1:17,7:23:99:434,0,123	0/1:6,6:13:69.35:258,0,69	0/1:14,10:23:99:441,0,194	0/0:13,0:13:33.10:0,33,425	0/1:17,4:20:59.51:434,0,60	0/1:9,13:21:36.88:295,0,37	0/1:8,9:17:33.58:455,0,34	0/0:17,0:17:42.56:0,43,510	0/1:17,1:18:89.36:222,0,89	0/1:5,12:15:29.48:188,0,29	0/1:11,2:13:89.30:280,0,89	0/1:9,2:11:3.20:185,0,3	1/1:4,0:3:8.62:91,9,0	0/1:12,7:15:70.72:284,0,71	0/1:11,13:23:99:476,0,102	1/1:13,0:11:20.33:292,20,0	1/1:3,5:9:14.38:260,14,0	0/0:16,0:16:42.35:0,42,476	0/0:10,0:10:27.09:0,27,365	0/1:21,7:26:92.43:455,0,92	0/1:12,8:20:16.38:527,0,16	0/1:17,6:22:99:512,0,118	0/1:10,1:8:64.79:65,0,88
chr10	64763994	.	A	ACC	1709.27	PASS	AB=0.991;AC=27;AF=0.482;AN=56;BaseQRankSum=10.534;DP=496;FS=58.086;HRun=0;HaplotypeScore=127.1736;InbreedingCoeff=-0.0086;MQ=56.47;MQ0=22;MQRankSum=-4.615;QD=4.91;ReadPosRankSum=6.715;VQSLOD=0.7705;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:5.98:0,6,281	0/1:6,0:6:31.67:61,0,32	0/0:36,0:9:25.78:0,26,250	0/0:26,0:12:12.05:0,12,198	0/1:18,0:18:45.12:45,0,146	0/1:24,1:23:33.75:130,0,34	0/1:13,0:13:10.34:140,0,10	0/1:25,0:22:33.29:33,0,231	0/0:13,0:13:33.07:0,33,413	0/1:22,0:21:19.13:139,0,19	1/1:22,0:21:10.56:63,11,0	0/1:16,0:16:2.43:75,0,2	0/0:18,0:18:42.03:0,42,502	0/1:17,0:17:37.34:182,0,37	1/1:15,2:15:5.23:95,5,0	0/1:14,0:14:38.10:52,0,38	1/1:10,1:11:13.67:63,14,0	1/1:4,0:3:4.66:22,5,0	0/1:21,1:16:73:73,0,94	0/1:23,1:23:17.12:175,0,17	1/1:13,0:11:14.85:57,15,0	1/1:8,1:9:11.97:91,12,0	0/0:16,0:16:38.55:0,39,454	0/0:10,0:10:27.09:0,27,362	0/1:29,0:27:11.02:109,0,11	1/1:17,1:18:2.22:138,2,0	0/1:23,0:21:65.55:142,0,66	0/0:9,0:7:3.26:0,3,69
chr10	64764101	.	G	GAGAAAGAAAGAA	10793.41	PASS	AB=0.768;AC=40;AF=0.769;AN=52;BaseQRankSum=1.664;DP=454;FS=18.768;HRun=0;HaplotypeScore=120.7042;InbreedingCoeff=0.7646;MQ=47.84;MQ0=8;MQRankSum=-3.327;QD=34.26;ReadPosRankSum=-2.639;VQSLOD=2.7244;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:25:16.84:240,17,0	1/1:6,0:6:9.03:311,9,0	0/0:27,0:8:3.01:0,3,83	0/0:25,0:6:6.02:0,6,138	1/1:8,0:8:20.92:307,21,0	1/1:20,0:20:45.14:1107,45,0	1/1:7,0:7:18.05:314,18,0	1/1:27,0:26:50.90:462,51,0	0/0:14,0:14:36.05:0,36,856	1/1:4,10:18:27.06:672,27,0	1/1:6,10:18:20.94:317,21,0	1/1:7,0:7:12.04:364,12,0	0/0:15,0:15:30.09:0,30,811	1/1:0,11:11:3.01:170,3,0	1/1:15,0:14:36.01:885,36,0	./.	1/1:16,0:16:33.04:952,33,0	1/1:9,0:9:17.97:351,18,0	1/1:11,0:9:24:472,24,0	1/1:6,12:22:26.91:709,27,0	1/1:13,0:13:26.73:513,27,0	1/1:10,0:10:12.01:193,12,0	0/0:19,0:19:39.10:0,39,1009	0/1:16,0:16:3.23:3,0,667	./.	1/1:30,0:30:72.23:1996,72,0	0/1:2,12:15:0:0,0,0	1/1:11,0:10:15.03:457,15,0
chr10	64764960	.	C	CT	8822.42	PASS	AB=0.893;AC=43;AF=0.768;AN=56;BaseQRankSum=-1.168;DP=549;FS=1.503;HRun=11;HaplotypeScore=71.4658;InbreedingCoeff=0.7217;MQ=64.26;MQ0=1;MQRankSum=-1.547;QD=19.31;ReadPosRankSum=-0.120;VQSLOD=5.7403;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,10:16:4.29:222,4,0	1/1:3,10:13:27.05:274,27,0	0/1:19,0:14:10.77:11,0,68	0/1:13,0:11:1.12:1,0,26	0/0:21,0:21:20.27:0,20,298	1/1:4,24:28:63.13:640,63,0	1/1:5,9:14:0.81:190,1,0	1/1:8,26:34:72.13:724,72,0	0/0:17,0:17:32.82:0,33,255	1/1:4,29:33:67.36:829,67,0	1/1:3,20:23:19.55:548,20,0	1/1:4,16:20:27.05:274,27,0	0/0:16,0:17:31.85:0,32,238	1/1:3,14:17:33.06:330,33,0	0/1:9,8:17:2.20:162,0,2	1/1:0,12:12:27.05:274,27,0	1/1:2,21:24:50.94:501,51,0	1/1:6,11:17:33.07:335,33,0	1/1:6,15:21:45.09:456,45,0	1/1:4,18:22:36.03:488,36,0	1/1:3,9:12:18.04:183,18,0	1/1:1,12:13:36.07:365,36,0	0/0:18,0:19:37.61:0,38,273	0/0:18,0:17:44.83:0,45,348	1/1:5,27:33:48.89:666,49,0	1/1:5,20:27:67.18:650,67,0	1/1:3,20:23:54.11:548,54,0	1/1:1,5:6:15.03:151,15,0
chr10	64765858	.	AAGAGAG	A	1334.15	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.054;DP=775;FS=2.270;HRun=0;HaplotypeScore=163.7421;InbreedingCoeff=0.8903;MQ=59.48;MQ0=5;MQRankSum=-3.055;QD=24.26;ReadPosRankSum=-4.702;VQSLOD=2.6681;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,17:26:2.96:263,3,0	0/0:11,0:11:30.09:0,30,802	0/0:32,0:22:50.54:0,51,990	0/0:28,0:15:16.15:0,16,237	0/0:26,0:26:78.17:0,78,2077	0/0:35,0:35:93.22:0,93,2631	0/0:27,0:27:67.75:0,68,1966	1/1:4,25:29:72.14:1180,72,0	0/0:27,0:27:75.13:0,75,1959	0/0:40,0:40:99:0,102,2652	0/0:31,0:31:81.21:0,81,2198	0/0:29,0:30:72.17:0,72,1848	0/0:31,0:31:78.24:0,78,2164	0/0:38,0:39:99:0,99,2727	0/0:43,0:43:99:0,114,3421	0/0:28,0:28:72.17:0,72,1980	0/0:21,0:22:50.87:0,51,1249	0/0:10,0:10:24.07:0,24,624	0/0:23,0:21:57.07:0,57,968	0/0:24,0:24:60.18:0,60,1769	0/0:35,0:35:87.23:0,87,2205	0/0:30,0:30:90.19:0,90,2208	0/0:21,0:21:59.55:0,60,1435	0/0:31,0:31:84.13:0,84,2315	0/0:17,0:17:42.03:0,42,959	0/0:32,0:32:81.22:0,81,1885	0/0:39,0:39:99:0,108,2748	0/0:7,0:7:18.01:0,18,529
chr10	64766629	.	TCCCTCCA	T	19970.84	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=13.434;DP=603;FS=7.838;HRun=0;HaplotypeScore=167.1458;InbreedingCoeff=0.9566;MQ=72.65;MQ0=0;MQRankSum=-15.018;QD=44.58;ReadPosRankSum=0.457;VQSLOD=4.2068;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,32:38:66.23:1599,66,0	1/1:1,4:5:9.03:223,9,0	0/0:25,0:25:48.11:0,48,1401	0/0:17,0:17:27.62:0,28,919	0/0:20,0:20:54.19:0,54,2027	1/1:4,19:23:51.17:1179,51,0	1/1:6,21:27:54.18:1294,54,0	1/1:9,20:29:54.17:1290,54,0	0/0:22,0:22:66.23:0,66,2428	1/1:3,18:21:51.17:1201,51,0	1/1:7,18:25:27.09:589,27,0	1/1:6,21:28:59.23:1375,59,0	0/0:27,0:27:75.26:0,75,2785	1/1:3,22:25:54.19:1332,54,0	1/1:6,20:26:51.18:1259,51,0	1/1:2,15:17:42.14:1034,42,0	1/1:5,15:20:33.11:812,33,0	1/1:5,6:11:12.04:293,12,0	1/1:2,13:15:39.12:918,39,0	1/1:0,13:13:18.06:420,18,0	1/1:10,13:23:5.60:108,6,0	1/1:1,19:20:33.11:796,33,0	0/0:19,0:19:42.14:0,42,1555	0/0:25,0:25:63.20:0,63,2269	1/1:3,22:25:51.17:1225,51,0	1/1:2,21:23:60.20:1409,60,0	1/1:9,21:29:54.18:1318,54,0	1/1:0,4:4:12.04:297,12,0
chr10	64774924	.	TA	T	114.17	PASS	AC=2;AF=0.038;AN=52;BaseQRankSum=3.993;DP=524;FS=2.935;HRun=12;HaplotypeScore=50.9547;InbreedingCoeff=0.7197;MQ=60.60;MQ0=6;MQRankSum=1.538;QD=6.01;ReadPosRankSum=0.981;VQSLOD=1.5958;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,3:30:36.86:0,37,542	0/0:7,0:7:18.03:0,18,177	0/0:14,0:7:2.99:0,3,24	./.	0/0:30,2:32:60.86:0,61,776	0/0:17,0:17:19.12:0,19,373	0/0:7,1:8:14.77:0,15,133	0/0:38,0:35:42.93:0,43,600	1/1:7,12:18:25.98:207,26,0	0/0:17,0:18:18.69:0,19,350	0/0:22,1:23:30.81:0,31,467	0/0:16,0:16:30.05:0,30,298	0/0:17,0:17:36.06:0,36,361	0/0:19,1:20:9.99:0,10,270	0/0:21,0:21:41.99:0,42,396	0/0:26,0:26:54.09:0,54,541	0/0:21,1:24:45.51:0,46,596	0/0:12,0:12:20.15:0,20,237	0/0:20,2:22:10.43:0,10,431	0/0:21,1:22:27.84:0,28,447	0/0:13,0:13:30.06:0,30,305	0/0:4,0:4:9.02:0,9,91	0/0:11,0:10:24.03:0,24,237	0/0:9,0:9:24.03:0,24,236	0/0:18,1:19:21.86:0,22,397	0/0:24,0:24:57.04:0,57,561	0/0:43,0:43:99:0,108,1058	./.
chr10	64775248	.	GAGAA	G	10072.76	PASS	AB=0.739;AC=41;AF=0.759;AN=54;BaseQRankSum=9.723;DP=616;FS=4.158;HRun=0;HaplotypeScore=100.7249;InbreedingCoeff=0.6059;MQ=69.16;MQ0=4;MQRankSum=2.560;QD=20.07;ReadPosRankSum=2.237;VQSLOD=4.5706;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,19:32:42.13:628,42,0	1/1:4,3:7:6.02:94,6,0	0/0:21,0:12:0:0,0,0	./.	1/1:12,19:31:51.08:709,51,0	1/1:12,15:27:24.08:377,24,0	1/1:6,12:18:18.06:283,18,0	0/1:39,0:37:12.18:12,0,499	0/0:20,0:20:30.10:0,30,690	1/1:12,13:25:45.11:638,45,0	1/1:9,19:27:54.13:781,54,0	1/1:11,7:18:9.59:360,10,0	0/0:22,0:22:36.12:0,36,797	1/1:7,8:15:21.07:330,21,0	1/1:10,10:20:18.06:283,18,0	0/1:7,21:28:19.99:703,0,20	0/1:13,16:29:12.71:525,0,13	1/1:7,4:11:14.54:198,15,0	1/1:11,4:15:12.02:164,12,0	1/1:8,29:36:75.25:1160,75,0	1/1:6,7:13:15.05:236,15,0	1/1:3,9:12:27.09:403,27,0	0/0:19,0:19:48.16:0,48,1079	0/0:18,0:18:27.09:0,27,582	1/1:10,18:28:48.16:754,48,0	1/1:8,18:26:54.12:777,54,0	1/1:17,19:36:33.11:518,33,0	1/1:0,6:6:9.03:141,9,0
chr10	64776082	.	G	GAA	8838.71	PASS	AB=1.000;AC=39;AF=0.696;AN=56;BaseQRankSum=-8.885;DP=539;FS=3.458;HRun=10;HaplotypeScore=67.6510;InbreedingCoeff=0.8987;MQ=64.72;MQ0=7;MQRankSum=3.154;QD=24.62;ReadPosRankSum=4.119;VQSLOD=4.7008;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:23:50.56:0,51,551	1/1:2,3:6:12.03:163,12,0	0/1:41,0:25:3.87:4,0,248	0/0:33,0:14:29.54:0,30,273	0/0:18,0:19:47.83:0,48,463	1/1:3,18:22:42.14:610,42,0	1/1:1,8:10:15.05:223,15,0	0/0:35,0:36:86.84:0,87,846	0/0:15,0:15:36.07:0,36,364	1/1:2,22:26:64.22:840,64,0	1/1:3,28:34:81.09:1068,81,0	1/1:5,13:20:34.57:409,35,0	0/0:17,0:18:38.75:0,39,435	1/1:1,11:12:21.07:314,21,0	1/1:4,13:19:38.61:525,39,0	1/1:4,11:15:30.10:448,30,0	1/1:5,15:21:25.20:507,25,0	1/1:2,9:11:15.05:223,15,0	1/1:4,15:20:48.13:644,48,0	1/1:2,18:23:59.61:769,60,0	1/1:3,6:9:18.06:268,18,0	1/1:2,10:12:30.10:429,30,0	0/0:23,0:23:60.08:0,60,595	0/0:11,0:12:23.59:0,24,215	1/1:2,10:14:32.07:387,32,0	1/1:1,14:17:40.83:492,41,0	1/1:4,21:24:14.73:471,15,0	1/1:0,2:2:3.01:45,3,0
chr10	64776997	.	G	GTC	2650.63	PASS	AB=1.000;AC=40;AF=0.741;AN=54;BaseQRankSum=8.446;DP=629;FS=2.201;HRun=0;HaplotypeScore=154.8393;InbreedingCoeff=0.6710;MQ=59.31;MQ0=8;MQRankSum=-0.677;QD=5.88;ReadPosRankSum=1.652;VQSLOD=3.5563;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:8,23:31:29.84:489,30,0	1/1:8,0:7:10.57:47,11,0	0/0:25,0:13:5.47:0,5,178	0/0:42,0:22:38.29:0,38,474	./.	1/1:35,0:34:29.96:113,30,0	1/1:20,0:20:14.33:58,14,0	1/1:41,0:40:87.21:1276,87,0	0/0:20,0:20:39.45:0,39,547	1/1:25,0:23:31.02:166,31,0	1/1:14,0:14:5.37:33,5,0	0/1:21,0:21:6.24:48,0,6	0/0:29,0:29:46.24:0,46,559	1/1:22,0:22:8.86:58,9,0	0/1:27,0:25:5.35:42,0,5	1/1:17,0:16:5.59:31,6,0	1/1:13,0:13:7.28:23,7,0	1/1:6,0:5:8.34:51,8,0	1/1:18,0:16:15.94:94,16,0	1/1:29,0:28:12.24:40,12,0	1/1:23,0:22:7.59:28,8,0	1/1:22,0:22:4.74:16,5,0	0/0:25,0:25:54.13:0,54,637	0/0:18,0:18:26.68:0,27,337	1/1:21,0:21:10.11:49,10,0	1/1:28,0:27:15.55:76,16,0	1/1:21,0:20:16.14:78,16,0	1/1:9,0:8:5.48:17,5,0
chr10	64777005	.	CTCTCTGTG	C	5638.32	PASS	AB=1.000;AC=37;AF=0.685;AN=54;BaseQRankSum=6.181;DP=664;FS=0.000;HRun=0;HaplotypeScore=202.2010;InbreedingCoeff=0.5025;MQ=56.53;MQ0=20;MQRankSum=-0.691;QD=11.60;ReadPosRankSum=0.034;VQSLOD=3.8287;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:35,0:35:5.89:438,0,6	1/1:9,0:8:10.67:120,11,0	0/0:26,0:12:7.10:0,7,361	0/0:44,0:21:43:0,43,882	./.	1/1:34,0:32:18.43:375,18,0	1/1:19,0:19:25.95:217,26,0	1/1:9,38:44:99:1618,107,0	0/0:22,0:22:38.38:0,38,1198	1/1:29,0:27:16.88:478,17,0	1/1:18,0:17:5.95:44,6,0	0/1:28,0:27:37.77:220,0,38	0/0:27,0:27:63.22:0,63,1913	1/1:22,0:21:9.41:247,9,0	1/1:29,0:27:30.89:254,31,0	1/1:17,0:15:20.72:142,21,0	1/1:14,0:14:10.18:75,10,0	0/1:5,0:4:46.74:47,0,65	0/1:19,0:17:23.03:228,0,23	1/1:32,0:30:20.28:132,20,0	1/1:20,0:19:14.83:103,15,0	1/1:21,0:20:5.90:37,6,0	0/0:26,0:26:60.19:0,60,1504	0/0:17,0:17:29.92:0,30,1037	1/1:26,0:25:11.31:79,11,0	1/1:30,0:28:27.99:396,28,0	0/1:23,0:21:23.15:326,0,23	1/1:9,0:8:8.92:63,9,0
chr10	64777009	.	CTG	C	6380.93	PASS	AB=0.979;AC=42;AF=0.778;AN=54;BaseQRankSum=6.578;DP=641;FS=2.731;HRun=0;HaplotypeScore=149.7905;InbreedingCoeff=0.6691;MQ=55.35;MQ0=22;MQRankSum=-2.360;QD=12.94;ReadPosRankSum=-2.111;VQSLOD=4.5815;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:32,0:32:5.72:49,0,6	1/1:7,2:8:20.97:220,21,0	0/1:22,1:9:25.46:25,0,183	0/0:43,0:20:6.28:0,6,467	./.	1/1:25,9:33:59.05:681,59,0	1/1:10,6:18:26.68:298,27,0	1/1:46,0:43:56.15:335,56,0	0/0:22,0:22:24.16:0,24,703	1/1:22,6:25:66.38:745,66,0	1/1:3,14:17:3.01:43,3,0	1/1:16,8:24:7.94:359,8,0	0/0:24,0:24:58.37:0,58,872	1/1:16,9:24:41.21:461,41,0	1/1:16,11:25:39.21:473,39,0	1/1:2,14:15:20.93:263,21,0	1/1:3,10:14:11.41:142,11,0	1/1:4,1:4:6.57:56,7,0	1/1:12,4:15:42.48:418,42,0	1/1:5,26:29:20.37:274,20,0	1/1:4,13:16:15.05:213,15,0	1/1:2,20:21:6.02:86,6,0	0/0:25,0:25:57.13:0,57,872	0/0:18,0:18:35.78:0,36,555	1/1:4,19:24:8.67:128,9,0	1/1:20,6:25:66.13:659,66,0	1/1:14,6:20:12.49:325,12,0	1/1:2,8:8:9.03:128,9,0
chr10	64777525	.	G	GA	8778.97	PASS	AB=0.834;AC=41;AF=0.732;AN=56;BaseQRankSum=-10.300;DP=539;FS=1.866;HRun=10;HaplotypeScore=66.4630;InbreedingCoeff=0.7151;MQ=73.83;MQ0=1;MQRankSum=0.608;QD=20.14;ReadPosRankSum=2.447;VQSLOD=5.8586;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:29.95:0,30,246	1/1:2,6:8:21.05:224,21,0	0/0:26,0:21:37.60:0,38,245	0/1:19,0:17:7.08:7,0,131	0/0:26,1:27:34.44:0,34,485	1/1:2,20:21:54.14:576,54,0	1/1:3,11:14:8.44:295,8,0	1/1:7,18:26:53.74:530,54,0	0/0:3,0:3:8.99:0,9,74	1/1:7,23:30:41.50:636,42,0	1/1:11,13:24:11.43:317,11,0	1/1:6,11:18:29.90:297,30,0	0/0:21,0:21:50.89:0,51,418	1/1:5,12:17:38.93:395,39,0	1/1:6,16:23:20.47:422,20,0	1/1:2,22:25:39.42:570,39,0	1/1:4,14:18:38.60:375,39,0	1/1:5,13:18:39.05:399,39,0	0/1:7,13:20:4.08:352,0,4	1/1:3,29:32:62.56:858,63,0	1/1:3,4:7:12.03:128,12,0	1/1:3,16:19:48.12:512,48,0	0/1:15,2:17:19.02:19,0,275	0/0:12,0:12:32.94:0,33,267	1/1:5,22:27:40.21:644,40,0	1/1:7,19:26:13.86:558,14,0	1/1:3,21:24:57.60:602,58,0	1/1:0,2:2:6.02:64,6,0
chr10	64778897	.	T	TA	9628.13	PASS	AB=0.552;AC=36;AF=0.643;AN=56;BaseQRankSum=-13.692;DP=557;FS=1.156;HRun=9;HaplotypeScore=50.5254;InbreedingCoeff=0.8347;MQ=61.70;MQ0=3;MQRankSum=-0.121;QD=26.02;ReadPosRankSum=2.198;VQSLOD=5.4005;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:59.46:0,59,504	1/1:3,9:12:6.93:289,7,0	0/0:10,0:9:20.99:0,21,182	0/0:13,0:9:23.99:0,24,208	0/0:29,2:31:41.76:0,42,585	1/1:1,20:21:54.15:597,54,0	0/1:1,4:5:14:88,0,14	0/0:36,0:36:92.95:0,93,803	0/0:12,0:12:26.99:0,27,234	1/1:4,18:22:54.15:597,54,0	1/1:4,24:28:43.13:704,43,0	1/1:1,12:13:36.10:398,36,0	0/0:18,0:18:47.99:0,48,417	1/1:2,19:21:54.15:597,54,0	1/1:4,18:22:28.09:538,28,0	1/1:2,26:28:69.07:763,69,0	1/1:3,16:19:39.11:431,39,0	1/1:3,15:17:42.09:464,42,0	0/1:4,18:22:12.15:516,0,12	1/1:1,26:27:75.16:816,75,0	1/1:2,13:15:30.08:332,30,0	1/1:2,10:12:27.07:299,27,0	0/0:21,0:21:50.98:0,51,443	0/0:16,0:16:38.99:0,39,338	1/1:1,20:21:54.15:597,54,0	1/1:4,20:23:14.06:605,14,0	1/1:2,25:27:60.16:664,60,0	1/1:2,10:12:30.08:332,30,0
chr10	64782042	.	GAA	G	6029.90	PASS	AB=0.640;AC=39;AF=0.696;AN=56;BaseQRankSum=-0.123;DP=571;FS=1.259;HRun=14;HaplotypeScore=80.0052;InbreedingCoeff=0.8064;MQ=61.46;MQ0=14;MQRankSum=-0.614;QD=15.91;ReadPosRankSum=2.865;VQSLOD=4.2796;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:37:75.24:0,75,1018	1/1:1,5:6:12.01:111,12,0	0/0:22,0:8:17.99:0,18,153	0/0:17,0:7:2.28:0,2,91	0/1:7,2:16:51.43:79,0,51	1/1:8,14:23:30.70:359,31,0	1/1:6,13:19:29.22:244,29,0	0/0:7,0:30:54.44:0,54,193	0/0:15,0:15:33.11:0,33,461	1/1:3,14:17:39.02:357,39,0	1/1:7,13:21:35.36:361,35,0	1/1:7,21:28:59.97:538,60,0	0/0:20,1:21:26.13:0,26,625	1/1:3,15:20:50.26:424,50,0	1/1:2,10:12:24.01:222,24,0	1/1:1,13:15:32.78:289,33,0	1/1:3,18:21:41.77:373,42,0	1/1:4,10:14:8.67:244,9,0	1/1:6,13:19:29.83:316,30,0	1/1:6,10:17:1.35:209,1,0	1/1:3,14:16:39.04:361,39,0	1/1:5,13:22:44.04:347,44,0	0/0:20,0:20:4.80:0,5,407	0/0:24,0:27:66.16:0,66,832	1/1:4,11:17:29.32:292,29,0	1/1:7,14:23:41.38:352,41,0	1/1:7,13:19:33.02:305,33,0	1/1:12,7:21:13.52:247,14,0
chr10	64783165	.	G	GAA	15717.06	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-14.696;DP=624;FS=0.344;HRun=8;HaplotypeScore=64.9630;InbreedingCoeff=0.9948;MQ=73.23;MQ0=0;MQRankSum=-1.823;QD=36.89;ReadPosRankSum=3.165;VQSLOD=4.7559;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:84.22:0,84,936	1/1:2,10:13:27.09:429,27,0	0/0:11,0:11:11.97:0,12,133	0/0:19,0:19:36.08:0,36,395	0/0:24,0:24:69.15:0,69,750	1/1:3,25:28:69.24:1095,69,0	1/1:2,13:16:33.11:524,33,0	0/0:42,0:42:91.26:0,91,1138	0/0:18,0:18:48.13:0,48,535	1/1:5,18:24:56.67:832,57,0	1/1:4,23:27:66.22:1039,66,0	1/1:1,16:17:48.16:762,48,0	0/0:19,0:19:39.08:0,39,434	1/1:0,15:16:39.13:619,39,0	1/1:2,13:14:36.12:572,36,0	1/1:1,24:25:60.20:952,60,0	1/1:1,19:20:42.14:667,42,0	1/1:4,16:20:51.12:780,51,0	1/1:6,21:28:65.68:958,66,0	1/1:5,30:35:90.20:1347,90,0	1/1:1,13:16:39.13:619,39,0	1/1:2,22:24:57.03:795,57,0	0/0:20,0:20:51.09:0,51,548	0/0:15,0:15:42.11:0,42,468	1/1:2,23:26:60.20:934,60,0	1/1:3,22:25:66.19:989,66,0	1/1:7,25:33:78.27:1233,78,0	1/1:4,14:18:36.12:571,36,0
chr10	64783619	.	C	CAAA	13935.11	PASS	AB=1.000;AC=40;AF=0.714;AN=56;BaseQRankSum=-8.602;DP=616;FS=0.000;HRun=9;HaplotypeScore=89.3679;InbreedingCoeff=0.8012;MQ=62.64;MQ0=2;MQRankSum=-1.248;QD=29.28;ReadPosRankSum=-0.706;VQSLOD=3.4791;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:24:75.16:75,0,319	1/1:1,4:5:12:178,12,0	0/0:18,0:16:33:0,33,389	0/0:9,0:7:10.85:0,11,93	0/0:23,0:24:66.10:0,66,799	1/1:7,18:26:39.08:695,39,0	1/1:5,6:12:15.01:224,15,0	0/1:30,0:30:25.67:26,0,268	0/0:23,0:23:60.18:0,60,752	1/1:6,25:34:86.52:1342,87,0	1/1:3,13:18:44.97:656,45,0	1/1:4,18:24:40.62:750,41,0	0/0:29,0:29:75.17:0,75,945	1/1:5,22:28:30.10:576,30,0	1/1:5,21:28:45.11:815,45,0	1/1:3,18:21:45.07:778,45,0	1/1:4,12:17:24.08:457,24,0	1/1:3,20:23:48.15:863,48,0	1/1:9,12:22:43.88:694,44,0	1/1:1,16:19:54.01:820,54,0	1/1:5,9:13:8.99:138,9,0	1/1:1,17:20:54.10:930,54,0	0/0:20,0:20:51.12:0,51,629	0/0:17,0:17:42.12:0,42,530	1/1:3,26:29:57.15:1066,57,0	1/1:7,16:24:51.12:857,51,0	1/1:6,28:40:78.25:1465,78,0	1/1:4,12:17:27.09:533,27,0
chr10	64786628	.	AG	A	15191.56	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=9.992;DP=664;FS=0.975;HRun=3;HaplotypeScore=66.0869;InbreedingCoeff=0.9661;MQ=81.68;MQ0=0;MQRankSum=-2.510;QD=34.29;ReadPosRankSum=3.183;VQSLOD=5.4936;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,147,2114	1/1:0,6:6:18.06:223,18,0	0/0:20,0:20:57.19:0,57,810	0/0:18,0:18:29.83:0,30,614	0/0:27,0:27:81.26:0,81,1148	1/1:1,21:22:60.19:744,60,0	1/1:1,17:18:48.15:593,48,0	0/0:29,0:29:81.27:0,81,1166	0/0:19,0:19:54.17:0,54,759	1/1:1,29:30:87.24:1052,87,0	1/1:0,22:22:63.20:781,63,0	1/1:0,29:29:81.25:1004,81,0	0/0:30,0:30:90.30:0,90,1292	1/1:0,24:24:72.23:892,72,0	1/1:1,27:28:78.25:967,78,0	1/1:0,27:27:69.22:855,69,0	1/1:1,22:23:63.20:781,63,0	1/1:1,6:7:1.77:204,2,0	1/1:1,22:23:66.18:793,66,0	1/1:0,25:25:75.17:908,75,0	1/1:2,45:47:99:1562,126,0	1/1:2,16:18:48.15:595,48,0	0/0:13,0:13:33.11:0,33,475	0/0:16,0:16:45.14:0,45,631	1/1:3,30:33:84.26:1041,84,0	1/1:0,22:22:66.21:818,66,0	1/1:0,30:30:84.26:1041,84,0	1/1:0,9:9:27.08:335,27,0
chr10	64787174	.	AAC	A	1490.56	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.511;DP=572;FS=7.344;HRun=0;HaplotypeScore=66.7926;InbreedingCoeff=0.9827;MQ=84.82;MQ0=0;MQRankSum=0.555;QD=36.36;ReadPosRankSum=-2.564;VQSLOD=4.8410;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,13:14:33.11:473,33,0	0/0:5,0:5:15.05:0,15,268	0/0:22,0:22:48.64:0,49,1040	0/0:16,0:16:48.16:0,48,861	0/0:33,0:33:96.33:0,96,1750	0/0:24,0:24:72.25:0,72,1319	0/0:5,0:5:15.05:0,15,275	1/1:0,27:27:81.26:1139,81,0	0/0:17,0:17:45.15:0,45,815	0/0:32,0:32:93.32:0,93,1694	0/0:25,0:25:75.26:0,75,1368	0/0:22,0:22:60.21:0,60,1094	0/0:17,0:17:51.17:0,51,910	0/0:25,0:25:72.25:0,72,1308	0/0:23,0:23:66.23:0,66,1200	0/0:16,0:16:45.15:0,45,825	0/0:19,0:19:57.20:0,57,1036	0/0:9,0:9:27.09:0,27,494	0/0:30,0:30:87.24:0,87,1511	0/0:47,0:47:99:0,138,2522	0/0:14,0:14:42.12:0,42,730	0/0:13,0:13:39.13:0,39,705	0/0:22,0:22:60.21:0,60,1100	0/0:14,0:14:42.14:0,42,759	0/0:17,0:17:51.15:0,51,875	0/0:28,0:28:78.27:0,78,1430	0/0:27,0:27:78.27:0,78,1421	0/0:9,0:9:27.04:0,27,403
chr10	64787566	.	G	GA	4322.99	PASS	AB=0.755;AC=37;AF=0.661;AN=56;BaseQRankSum=-5.239;DP=581;FS=7.424;HRun=14;HaplotypeScore=73.8217;InbreedingCoeff=0.4706;MQ=73.74;MQ0=1;MQRankSum=-1.689;QD=9.89;ReadPosRankSum=0.356;VQSLOD=4.0339;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:27:34.52:0,35,291	1/1:0,4:4:8.93:79,9,0	0/1:27,0:20:7.44:7,0,29	0/0:13,0:10:12.63:0,13,64	0/0:27,1:28:25.27:0,25,286	1/1:8,18:27:28.57:364,29,0	0/1:8,10:19:21.90:189,0,22	0/0:38,3:42:16.59:0,17,323	0/0:14,0:14:33.57:0,34,203	1/1:14,15:30:6.28:288,6,0	0/1:6,11:18:4.67:196,0,5	1/1:2,16:19:26.84:225,27,0	0/0:17,0:17:17.40:0,17,226	0/1:5,11:16:8.58:174,0,9	1/1:10,14:24:33.46:291,33,0	1/1:2,17:21:26.80:219,27,0	1/1:3,14:17:38.98:339,39,0	1/1:8,3:11:9:79,9,0	1/1:10,8:17:3.17:173,3,0	1/1:13,20:35:37.77:412,38,0	1/1:5,11:16:24:211,24,0	1/1:2,15:18:16.52:251,17,0	0/1:13,1:15:6.74:7,0,82	0/1:12,1:14:4.26:4,0,80	1/1:7,10:20:22.10:226,22,0	0/1:6,14:23:0.89:222,0,1	1/1:10,20:31:10.62:201,11,0	1/1:3,10:13:4.73:165,5,0
chr10	64788193	.	TA	T	810.77	PASS	AB=0.938;AC=6;AF=0.107;AN=56;BaseQRankSum=5.463;DP=602;FS=1.751;HRun=13;HaplotypeScore=70.8179;InbreedingCoeff=0.6383;MQ=63.02;MQ0=1;MQRankSum=-1.736;QD=9.01;ReadPosRankSum=1.042;VQSLOD=3.0370;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,26:35:66.63:469,67,0	0/0:9,0:9:18.02:0,18,170	0/1:8,0:5:18.24:32,0,18	0/0:10,0:8:11.18:0,11,61	0/0:10,0:33:57.38:0,57,307	0/0:23,0:23:51.08:0,51,496	0/0:18,0:18:39.03:0,39,365	1/1:16,21:35:40.40:436,40,0	0/0:25,0:25:62.40:0,62,570	0/0:28,0:28:66.09:0,66,634	0/0:32,0:31:66.08:0,66,632	0/0:20,1:21:29.09:0,29,411	0/0:23,0:23:54.09:0,54,525	0/0:19,0:19:51.03:0,51,475	0/0:30,1:31:52.97:0,53,629	0/0:20,0:22:47.91:0,48,448	0/0:17,0:17:39.05:0,39,374	0/0:23,1:23:29.08:0,29,425	0/0:23,1:24:31.44:0,31,486	0/0:27,0:27:54.51:0,55,505	0/0:11,0:11:30.02:0,30,281	0/0:18,0:18:48.05:0,48,454	0/0:15,0:15:39.03:0,39,362	0/0:27,0:27:69.04:0,69,650	0/0:14,1:15:20.15:0,20,353	0/0:22,1:23:20.18:0,20,341	0/0:16,0:16:36.01:0,36,330	0/1:6,1:7:6.88:7,0,102
chr10	64792265	.	TTAAG	T	19409.35	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=8.942;DP=666;FS=0.642;HRun=0;HaplotypeScore=122.5106;InbreedingCoeff=0.9959;MQ=85.16;MQ0=1;MQRankSum=-6.091;QD=46.43;ReadPosRankSum=5.357;VQSLOD=5.5820;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:60.21:0,60,1600	1/1:0,11:11:24.08:448,24,0	0/0:26,0:26:67.22:0,67,1546	0/0:21,0:21:48.13:0,48,1108	0/0:33,0:33:96.32:0,96,2406	1/1:2,21:23:57.20:1064,57,0	1/1:0,23:23:63.22:1173,63,0	0/0:46,0:46:99:0,123,3203	0/0:25,0:25:72.25:0,72,1888	1/1:0,27:27:81.28:1498,81,0	1/1:2,23:25:63.22:1176,63,0	1/1:0,31:31:69.24:1285,69,0	0/0:23,0:23:66.23:0,66,1748	1/1:1,24:25:60.21:1119,60,0	1/1:3,23:25:63.22:1173,63,0	1/1:4,19:23:51.17:952,51,0	1/1:0,22:22:60.21:1119,60,0	1/1:1,9:10:18.06:334,18,0	1/1:0,22:21:63.22:1166,63,0	1/1:1,20:20:45.15:837,45,0	1/1:2,16:18:33.11:616,33,0	1/1:1,22:23:60.21:1109,60,0	0/0:23,0:23:66.23:0,66,1732	0/0:26,0:26:69.22:0,69,1768	1/1:0,27:27:66.23:1226,66,0	1/1:2,26:28:78.27:1436,78,0	1/1:1,26:27:75.26:1400,75,0	1/1:1,5:6:15.05:280,15,0
chr10	64792376	.	G	GA	1167.86	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-6.897;DP=656;FS=0.000;HRun=8;HaplotypeScore=59.9957;InbreedingCoeff=0.9684;MQ=70.83;MQ0=0;MQRankSum=1.198;QD=25.39;ReadPosRankSum=-4.107;VQSLOD=2.4847;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,19:19:54.16:623,54,0	0/0:13,0:13:39.02:0,39,357	0/0:11,0:12:11.98:0,12,105	0/0:6,0:7:12:0,12,110	0/0:34,0:34:90.05:0,90,823	0/0:36,0:36:99:0,99,906	0/0:19,0:19:50.99:0,51,458	1/1:6,21:27:38.68:666,39,0	0/0:12,0:12:33:0,33,298	0/0:37,0:37:90.04:0,90,821	0/0:24,0:24:69.03:0,69,631	0/0:23,0:23:63.03:0,63,577	0/0:26,0:26:69.02:0,69,626	0/0:29,0:29:78.04:0,78,714	0/0:30,0:30:84.01:0,84,759	0/0:24,0:24:54.01:0,54,494	0/0:25,0:25:63.03:0,63,576	0/0:14,0:14:39.02:0,39,357	0/0:23,0:23:65.99:0,66,596	0/0:27,0:27:69.01:0,69,627	0/0:18,0:18:45.02:0,45,412	0/0:35,0:35:84.04:0,84,768	0/0:23,0:23:63.02:0,63,572	0/0:19,0:19:54.02:0,54,494	0/0:33,1:34:89.98:0,90,810	0/0:27,0:27:69.03:0,69,631	0/0:26,0:26:69.04:0,69,631	0/0:12,0:13:32.04:0,32,280
chr10	64792671	.	C	CAAAAA	9780.16	PASS	AB=0.971;AC=39;AF=0.696;AN=56;BaseQRankSum=3.557;DP=584;FS=0.000;HRun=10;HaplotypeScore=130.6498;InbreedingCoeff=0.8788;MQ=60.70;MQ0=5;MQRankSum=-7.622;QD=25.34;ReadPosRankSum=-1.296;VQSLOD=2.1814;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:27:53.87:0,54,775	1/1:4,3:7:11.71:216,12,0	0/0:35,0:13:16.30:0,16,202	0/1:32,0:17:5.36:5,0,126	0/0:31,0:31:62.60:0,63,932	1/1:1,10:15:18.06:470,18,0	1/1:2,10:13:10.28:229,10,0	0/0:31,0:32:70.66:0,71,1006	0/0:15,0:15:20.95:0,21,297	1/1:6,9:21:44.38:682,44,0	1/1:9,9:23:29.31:451,29,0	1/1:25,2:27:47.71:555,48,0	0/0:23,0:26:54.01:0,54,785	1/1:14,2:16:35.38:450,35,0	1/1:11,4:16:38.19:726,38,0	1/1:6,9:19:7.71:109,8,0	1/1:6,10:17:8.20:141,8,0	1/1:16,1:17:26.85:466,27,0	1/1:6,13:22:48.56:615,49,0	1/1:4,15:24:39.04:724,39,0	1/1:3,0:3:6.02:106,6,0	1/1:15,3:18:39.24:602,39,0	0/0:21,0:21:31.23:0,31,686	0/0:9,0:11:19.45:0,19,211	1/1:16,5:24:55.56:896,56,0	1/1:7,10:23:45.09:906,45,0	1/1:35,4:39:74.53:1141,75,0	1/1:8,1:9:19.25:289,19,0
chr10	64795882	.	GAC	G	746.24	PASS	AB=0.935;AC=24;AF=0.462;AN=52;BaseQRankSum=6.868;DP=500;FS=0.000;HRun=0;HaplotypeScore=76.3641;InbreedingCoeff=-0.4260;MQ=66.90;MQ0=9;MQRankSum=0.236;QD=1.89;ReadPosRankSum=1.531;VQSLOD=1.2262;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:19,0:19:13.01:13,0,138	0/0:12,0:12:9.93:0,10,292	1/1:22,0:14:1.25:3,1,0	./.	1/1:12,0:29:19.89:98,20,0	0/1:18,2:20:34.05:34,0,270	0/1:14,1:15:44.63:45,0,77	./.	1/1:8,7:16:26.36:256,26,0	0/1:22,0:22:8.54:9,0,263	0/0:12,0:13:6.81:0,7,225	0/1:13,2:16:38.35:38,0,284	0/1:14,1:16:64.74:65,0,238	0/0:15,0:16:16.43:0,16,344	0/0:18,0:18:0.52:0,1,385	0/1:12,2:14:11.67:12,0,247	0/1:26,4:30:82.80:83,0,463	0/1:12,0:12:14.54:15,0,200	0/1:16,2:18:17.74:18,0,103	0/1:18,0:18:10.12:10,0,205	0/1:19,0:18:46.36:46,0,98	0/1:17,2:19:48.99:49,0,282	0/1:7,1:10:47.35:47,0,124	0/1:17,2:19:8.68:9,0,266	0/1:18,1:19:11.69:12,0,219	0/1:19,0:19:5.03:5,0,144	0/1:18,3:20:32.38:32,0,348	0/0:8,0:7:17.97:0,18,208
chr10	64797738	.	T	TA	9601.75	PASS	AB=0.850;AC=39;AF=0.696;AN=56;BaseQRankSum=-12.863;DP=619;FS=0.351;HRun=10;HaplotypeScore=63.4192;InbreedingCoeff=0.7633;MQ=72.28;MQ0=1;MQRankSum=0.489;QD=20.74;ReadPosRankSum=3.193;VQSLOD=5.7646;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:47.94:0,48,394	1/1:1,6:7:15.04:160,15,0	0/0:18,0:15:5.51:0,6,148	0/1:13,0:12:1.76:2,0,94	0/1:25,0:25:76.54:77,0,132	1/1:0,17:16:48.12:512,48,0	1/1:2,10:12:21.05:224,21,0	0/0:38,0:38:93.87:0,94,723	0/0:18,0:18:44.89:0,45,362	1/1:6,22:28:43.30:634,43,0	1/1:6,22:28:68.83:689,69,0	0/1:5,23:28:9.20:483,0,9	0/0:24,0:24:58.92:0,59,465	1/1:3,19:22:51.13:542,51,0	1/1:3,25:27:41.53:647,42,0	1/1:6,24:31:40.29:557,40,0	1/1:2,22:24:41.51:638,42,0	1/1:4,16:20:17.47:391,17,0	1/1:4,12:17:44.89:430,45,0	1/1:5,22:28:68.92:693,69,0	1/1:1,7:8:18.05:192,18,0	1/1:3,14:17:36.01:359,36,0	0/0:24,0:25:36.97:0,37,449	0/0:15,0:15:32.92:0,33,266	1/1:4,15:19:14.46:359,14,0	1/1:5,25:31:77.78:749,78,0	1/1:7,32:38:63.29:816,63,0	1/1:5,16:21:42.11:448,42,0
chr10	64798074	.	T	TA	1741.82	PASS	AB=0.814;AC=32;AF=0.571;AN=56;BaseQRankSum=-2.811;DP=528;FS=2.021;HRun=19;HaplotypeScore=74.1459;InbreedingCoeff=-0.0710;MQ=73.45;MQ0=7;MQRankSum=-1.506;QD=4.01;ReadPosRankSum=-1.378;VQSLOD=-0.3656;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:11:18.55:0,19,81	1/1:4,3:7:5.93:40,6,0	0/0:43,0:14:1.47:0,1,35	0/1:34,0:17:10.06:18,0,10	1/1:9,3:30:35.86:291,36,0	0/1:15,7:22:14.51:114,0,15	0/1:5,5:12:2.01:42,0,2	1/1:21,10:32:1.57:125,2,0	0/0:22,0:22:28.75:0,29,143	0/1:10,5:16:10.35:44,0,10	1/1:14,1:21:3.79:100,4,0	0/1:20,1:20:4.65:86,0,5	0/1:22,1:24:21.98:22,0,33	0/1:7,7:14:3.52:33,0,4	1/1:13,2:16:4.66:65,5,0	1/1:16,6:24:37.33:279,37,0	0/1:10,8:18:24.77:25,0,25	0/0:6,3:9:1.08:0,1,3	0/1:14,6:20:30.99:89,0,31	0/1:21,2:23:4.53:85,0,5	0/1:7,1:8:11.57:12,0,19	1/1:2,2:4:5.89:37,6,0	0/1:17,1:21:11.10:11,0,72	0/0:8,0:8:8.45:0,8,42	1/1:9,2:17:4.79:74,5,0	0/1:9,5:14:0.06:68,0,0	1/1:15,4:20:23.07:183,23,0	0/1:8,1:13:17.70:56,0,18
chr10	64800888	.	GA	G	1518.98	PASS	AB=0.782;AC=31;AF=0.554;AN=56;BaseQRankSum=2.236;DP=643;FS=9.597;HRun=16;HaplotypeScore=89.5421;InbreedingCoeff=-0.0266;MQ=73.18;MQ0=0;MQRankSum=-0.414;QD=3.06;ReadPosRankSum=6.756;VQSLOD=-0.4804;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:12,1:24:15.57:45,16,0	0/1:2,4:7:11.99:45,0,12	0/1:25,0:20:27.86:28,0,41	0/1:14,2:11:4.22:4,0,38	0/0:24,0:36:48.81:0,49,308	0/1:15,2:19:28.86:61,0,29	0/1:17,6:25:9.03:46,0,9	0/1:28,7:36:39.82:65,0,40	0/0:20,1:20:7.71:0,8,148	0/1:17,3:21:30.79:57,0,31	0/1:15,10:29:36.45:107,0,36	1/1:16,9:26:2.01:108,2,0	0/0:31,3:34:26.83:0,27,309	0/0:9,7:16:0:0,0,0	1/1:21,10:32:24.84:149,25,0	1/1:14,2:17:6.70:43,7,0	1/1:9,11:21:0.52:91,1,0	1/1:6,5:11:17.12:106,17,0	0/1:12,8:24:45.39:114,0,45	1/1:13,9:24:9.10:89,9,0	0/1:21,4:26:3.75:90,0,4	1/1:10,10:21:3.62:94,4,0	0/0:20,0:24:28.82:0,29,236	0/0:14,1:16:17.34:0,17,205	0/1:13,10:24:38.48:100,0,38	0/1:19,4:24:8.73:56,0,9	1/1:17,9:29:6.38:134,6,0	0/1:9,3:12:9.35:55,0,9
chr10	64801741	.	GA	G	4633.44	PASS	AB=0.717;AC=39;AF=0.696;AN=56;BaseQRankSum=5.717;DP=644;FS=0.397;HRun=14;HaplotypeScore=93.5125;InbreedingCoeff=0.7384;MQ=78.42;MQ0=5;MQRankSum=-1.049;QD=10.32;ReadPosRankSum=5.761;VQSLOD=4.4091;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:7,1:13:0.87:1,0,73	0/1:2,6:10:15.34:90,0,15	0/0:45,0:27:28.20:0,28,200	0/0:28,0:20:12.61:0,13,104	1/1:7,32:43:69:423,69,0	1/1:8,22:35:14.66:348,15,0	1/1:4,6:13:17.98:100,18,0	0/0:34,2:38:36.03:0,36,574	0/0:18,1:19:18.54:0,19,317	1/1:9,20:29:11.95:352,12,0	1/1:3,18:21:42.04:289,42,0	1/1:6,19:26:21.88:286,22,0	0/0:24,2:27:44.52:0,45,554	1/1:4,17:22:28.68:186,29,0	1/1:6,20:28:42.62:279,43,0	1/1:6,17:27:55.63:352,56,0	1/1:6,14:20:1.91:153,2,0	1/1:3,6:9:14.83:103,15,0	1/1:5,13:19:43.66:293,44,0	1/1:7,12:21:35.56:228,36,0	0/1:3,1:6:19.43:19,0,31	1/1:5,14:19:23.63:164,24,0	0/0:15,0:18:34.06:0,34,355	0/0:18,1:19:15.45:0,15,282	1/1:10,11:22:18.90:251,19,0	1/1:9,16:25:19.42:265,19,0	1/1:8,21:29:19.70:280,20,0	1/1:1,9:11:25.81:170,26,0
chr10	64803090	.	T	TGTCACTCG	48686	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-8.898;DP=650;FS=11.304;HRun=0;HaplotypeScore=135.0257;InbreedingCoeff=0.9737;MQ=69.28;MQ0=0;MQRankSum=-15.375;QD=93.63;ReadPosRankSum=0.565;VQSLOD=5.4454;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,21:33:66.23:2970,66,0	1/1:3,5:8:9.03:368,9,0	0/0:16,0:16:42.13:0,42,1042	0/0:18,0:18:23.98:0,24,629	1/1:4,16:16:24.08:1079,24,0	1/1:6,11:18:36.12:1622,36,0	1/1:11,15:31:69.24:3086,69,0	1/1:24,12:42:99:4443,123,0	0/0:21,0:21:63.22:0,63,1842	1/1:7,14:19:54.18:2269,54,0	1/1:2,6:7:12.04:541,12,0	1/1:7,21:32:75.21:3135,75,0	0/0:28,0:28:84.29:0,84,2388	1/1:6,29:37:99:4450,99,0	1/1:4,25:31:81.28:3645,81,0	1/1:14,21:39:93.28:3987,93,0	1/1:2,12:17:42.14:1892,42,0	1/1:9,4:15:24.08:1061,24,0	1/1:9,10:22:63.20:2584,63,0	1/1:4,12:11:24.08:1079,24,0	1/1:10,9:23:36.12:1607,36,0	1/1:7,10:16:24.08:1081,24,0	0/0:13,0:13:36.12:0,36,1054	0/0:34,0:34:99:0,102,2901	1/1:6,4:9:12.04:535,12,0	1/1:2,14:18:54.19:2237,54,0	1/1:11,21:37:87.30:3796,87,0	1/1:1,9:10:27.09:1219,27,0
chr10	64803510	.	GGCCGCAGCTGCCGCTGCGGCT	G	85.09	PASS	AB=0.927;AC=3;AF=0.079;AN=38;BaseQRankSum=3.459;DP=329;FS=0.000;HRun=0;HaplotypeScore=59.6655;InbreedingCoeff=0.1818;MQ=29.19;MQ0=111;MQRankSum=-1.200;QD=1.58;ReadPosRankSum=-1.976;VQSLOD=1.1285;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	0/0:3,0:2:0.47:0,0,1	./.	./.	./.	./.	0/0:42,2:28:22.53:0,23,1418	./.	0/0:11,0:9:3.01:0,3,136	0/0:11,0:5:8.99:0,9,210	./.	0/0:20,0:13:14.40:0,14,649	0/0:4,0:3:3.01:0,3,67	0/0:16,0:11:5.83:0,6,368	0/0:14,0:10:3.01:0,3,75	0/0:9,0:7:9.03:0,9,324	0/1:47,4:36:99:155,0,943	0/0:27,0:16:2.19:0,2,274	./.	0/0:4,0:2:0.47:0,0,1	./.	0/0:4,0:3:0.47:0,0,1	0/0:2,0:2:0:0,0,0	0/0:31,2:16:8.18:0,8,486	0/0:4,0:2:3.01:0,3,68	0/0:7,0:5:9:0,9,141	0/0:7,0:4:3.01:0,3,262	1/1:3,0:1:0.47:1,0,0
chr10	64803981	.	AAG	A	1218.54	PASS	AB=0.796;AC=8;AF=0.143;AN=56;BaseQRankSum=0.356;DP=644;FS=27.635;HRun=0;HaplotypeScore=99.7687;InbreedingCoeff=-0.1727;MQ=59.21;MQ0=39;MQRankSum=-3.635;QD=5.42;ReadPosRankSum=1.824;VQSLOD=1.1937;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:78.24:0,78,1213	0/1:4,6:9:36.01:157,0,36	0/1:42,1:18:13.93:14,0,304	0/0:47,0:13:16.14:0,16,213	0/0:29,0:23:59.84:0,60,348	0/1:22,10:26:99:164,0,240	0/1:14,5:17:89.80:205,0,90	0/0:25,0:22:66.15:0,66,927	0/0:24,3:22:9.56:0,10,736	0/0:20,0:16:44.49:0,44,239	0/0:19,0:16:34.32:0,34,176	0/0:24,0:24:56.31:0,56,307	0/0:15,0:15:39.12:0,39,620	0/0:18,0:18:40.61:0,41,240	0/1:20,7:24:99:174,0,179	0/1:32,5:35:42.24:42,0,420	0/1:13,8:21:99:335,0,127	0/0:24,0:24:56.76:0,57,337	0/0:20,0:18:42.57:0,43,287	0/0:23,0:23:30.48:0,30,256	0/0:9,0:9:16.11:0,16,168	0/0:7,0:5:8.63:0,9,45	0/0:12,0:12:32.69:0,33,418	0/0:19,0:19:57.15:0,57,848	0/1:26,8:28:99:263,0,166	0/0:17,0:17:49.17:0,49,288	0/0:27,0:26:57.89:0,58,331	0/0:9,0:8:17.25:0,17,91
chr10	64803983	.	GA	G	6102.57	PASS	AB=0.715;AC=40;AF=0.714;AN=56;BaseQRankSum=5.019;DP=656;FS=2.899;HRun=11;HaplotypeScore=73.9630;InbreedingCoeff=0.7925;MQ=60.24;MQ0=39;MQRankSum=-0.628;QD=14.09;ReadPosRankSum=2.784;VQSLOD=5.4191;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:28:74.85:0,75,752	1/1:6,4:9:18.21:116,18,0	0/0:50,1:18:6.27:0,6,214	0/0:57,0:15:19.74:0,20,173	1/1:5,23:23:25.08:411,25,0	1/1:15,17:26:59.20:436,59,0	1/1:12,7:17:28.37:193,28,0	0/0:24,0:21:45.11:0,45,479	0/0:27,0:22:28.92:0,29,485	1/1:2,18:16:44.95:369,45,0	1/1:2,17:16:35.96:295,36,0	1/1:3,20:23:53.93:443,54,0	0/0:14,0:14:36.09:0,36,382	1/1:4,13:17:29.96:246,30,0	1/1:12,15:24:40.73:293,41,0	1/1:11,24:33:27.07:527,27,0	1/1:12,11:23:13.30:238,13,0	1/1:3,20:24:55.97:449,56,0	1/1:5,14:18:40.59:312,41,0	1/1:3,17:23:48.05:362,48,0	0/1:2,6:9:24.62:106,0,25	1/1:2,6:6:8.99:74,9,0	0/1:10,2:13:16.36:16,0,237	0/0:19,0:19:48.12:0,48,512	1/1:14,17:27:47.99:353,48,0	1/1:2,14:16:41.95:345,42,0	1/1:4,21:24:44.94:369,45,0	1/1:0,8:7:17.98:148,18,0
chr10	64805323	.	GA	G	245.46	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.361;DP=543;FS=0.976;HRun=10;HaplotypeScore=57.3102;InbreedingCoeff=0.8001;MQ=76.55;MQ0=0;MQRankSum=-1.268;QD=12.92;ReadPosRankSum=1.750;VQSLOD=3.4266;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:33:86.70:0,87,888	0/0:5,0:5:15.04:0,15,166	0/0:15,0:15:24.06:0,24,256	0/0:15,0:15:23.76:0,24,222	1/1:3,16:19:11.80:331,12,0	0/0:14,0:15:41.78:0,42,427	0/0:14,0:14:36.07:0,36,380	0/0:19,0:19:45.02:0,45,463	0/0:19,0:19:51.11:0,51,546	0/0:17,0:17:48.12:0,48,519	0/0:17,0:17:39.09:0,39,421	0/0:32,0:32:84.23:0,84,929	0/0:16,0:16:48.11:0,48,515	0/0:23,0:23:60.11:0,60,631	0/0:33,0:35:89.80:0,90,919	0/0:18,1:19:28.08:0,28,525	0/0:29,0:28:81.18:0,81,876	0/0:19,0:19:54.12:0,54,581	0/0:15,0:15:36.08:0,36,389	0/0:30,1:31:49.08:0,49,740	0/0:19,0:19:54.12:0,54,581	0/0:7,0:7:21.04:0,21,219	0/0:21,0:21:54.07:0,54,558	0/0:24,0:24:63.17:0,63,697	0/0:11,0:12:29.91:0,30,311	0/0:28,0:30:75.03:0,75,804	0/0:21,0:21:57.14:0,57,622	0/0:1,0:1:3.01:0,3,33
chr10	64808562	.	T	TG	245.35	PASS	AB=0.966;AC=32;AF=0.571;AN=56;BaseQRankSum=-0.783;DP=352;FS=5.552;HRun=13;HaplotypeScore=103.4307;InbreedingCoeff=0.3823;MQ=87.99;MQ0=0;MQRankSum=-1.912;QD=0.98;ReadPosRankSum=-2.641;VQSLOD=-0.3822;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:2.88:0,3,19	1/1:3,0:3:2.99:23,3,0	0/0:15,0:13:13.30:0,13,83	0/0:23,0:23:5.30:0,5,27	0/1:6,0:6:0:0,0,0	1/1:13,0:13:0.47:1,0,0	0/1:15,2:19:0.02:15,0,0	0/1:14,1:16:0:0,0,0	0/0:12,0:12:1.12:0,1,14	0/1:4,1:5:0:0,0,0	0/1:5,0:5:0:0,0,0	1/1:14,0:14:2.99:24,3,0	0/1:18,0:18:0.03:0,0,0	0/1:9,1:10:0:0,0,0	0/0:25,0:26:1.84:0,2,6	1/1:18,0:18:11.98:98,12,0	1/1:8,0:8:5.93:41,6,0	1/1:15,0:14:8.78:54,9,0	0/1:6,0:6:0:0,0,0	0/0:5,0:7:1.76:0,2,6	0/1:12,0:12:0:0,0,0	1/1:9,0:9:2.28:23,2,0	1/1:10,0:10:2.34:7,2,0	1/1:21,0:21:5.97:46,6,0	0/1:9,0:9:0:0,0,0	0/1:9,0:9:0:0,0,0	1/1:18,0:18:2.96:23,3,0	0/1:6,0:6:0:0,0,0
chr10	64808963	.	A	AAAAAC	5141.34	PASS	AB=0.935;AC=29;AF=0.518;AN=56;BaseQRankSum=10.691;DP=487;FS=1.303;HRun=0;HaplotypeScore=149.4065;InbreedingCoeff=-0.1107;MQ=35.60;MQ0=15;MQRankSum=-3.451;QD=12.66;ReadPosRankSum=-0.911;VQSLOD=4.4388;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:24:98.44:98,0,113	1/1:9,3:13:14.59:353,15,0	0/0:7,0:2:6:0,6,56	0/0:15,0:3:8.95:0,9,90	0/1:29,0:29:35.32:170,0,35	1/1:19,3:23:2.13:461,2,0	0/1:8,0:7:14.61:70,0,15	0/1:30,0:29:39.37:39,0,176	0/0:10,0:9:18:0,18,179	0/1:20,6:25:33.25:562,0,33	0/1:16,1:17:28.31:189,0,28	0/1:23,0:22:12.04:241,0,12	0/0:19,0:19:47.04:0,47,463	0/1:15,1:14:14.36:152,0,14	0/1:15,1:15:60.60:180,0,61	1/1:12,2:13:11.27:278,11,0	1/1:24,1:24:13.15:302,13,0	0/1:17,1:16:45.88:183,0,46	0/1:15,0:12:15.47:60,0,15	1/1:14,3:18:23.38:474,23,0	1/1:4,0:3:8.60:77,9,0	0/1:12,0:13:38.58:189,0,39	0/0:16,0:16:38.82:0,39,490	0/0:14,0:13:36.04:0,36,466	0/1:24,0:21:19.69:260,0,20	0/1:19,1:19:26.62:207,0,27	1/1:23,0:23:47.66:450,48,0	0/1:1,2:3:3.90:145,0,4
chr10	64808970	.	CA	C	6211.15	PASS	AB=0.850;AC=44;AF=0.786;AN=56;BaseQRankSum=7.209;DP=498;FS=8.850;HRun=17;HaplotypeScore=122.9987;InbreedingCoeff=0.7497;MQ=39.36;MQ0=14;MQRankSum=-6.081;QD=14.44;ReadPosRankSum=2.246;VQSLOD=4.1961;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,14:25:26.60:299,27,0	1/1:2,9:11:21.86:192,22,0	0/0:9,0:5:13.09:0,13,107	0/1:18,0:5:8.11:8,0,50	1/1:18,14:32:40.50:312,40,0	1/1:7,15:22:45.47:388,45,0	1/1:1,10:10:26.88:220,27,0	0/1:16,12:27:11.38:232,0,11	0/0:9,0:8:18.05:0,18,215	1/1:5,23:27:63.76:579,64,0	1/1:4,14:18:44.68:304,45,0	1/1:6,19:24:58.65:465,59,0	0/0:20,0:20:48.34:0,48,553	1/1:6,10:14:22.44:218,22,0	1/1:1,15:15:44.09:370,44,0	1/1:2,12:13:27.34:235,27,0	1/1:5,21:25:51.36:376,51,0	1/1:6,11:16:34.88:285,35,0	1/1:8,5:10:5:124,5,0	1/1:4,16:20:48.45:311,48,0	1/1:2,2:4:5.93:46,6,0	1/1:5,8:13:23.27:200,23,0	0/0:16,0:16:42.12:0,42,513	0/0:13,0:12:33.07:0,33,391	1/1:13,12:21:30.52:234,31,0	1/1:5,15:19:42.51:334,43,0	1/1:5,19:22:55.67:405,56,0	1/1:0,3:3:8.98:74,9,0
chr10	64808978	.	CAA	C	3433.39	PASS	AB=0.978;AC=23;AF=0.411;AN=56;BaseQRankSum=8.364;DP=512;FS=3.992;HRun=7;HaplotypeScore=139.2851;InbreedingCoeff=-0.5678;MQ=41.48;MQ0=13;MQRankSum=-3.121;QD=8.06;ReadPosRankSum=2.050;VQSLOD=0.0474;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:25:99:167,0,130	0/1:10,0:10:17.22:71,0,17	0/0:11,0:6:11.37:0,11,141	0/0:18,1:6:16.34:0,16,131	0/1:34,0:35:76.02:350,0,76	0/1:19,0:19:99:143,0,119	0/1:12,0:11:53.39:111,0,53	0/1:16,17:32:99:387,0,155	0/0:9,0:8:21.03:0,21,335	0/1:29,0:28:99:254,0,236	0/1:15,0:18:83.71:225,0,84	0/1:24,2:24:93.33:233,0,93	0/0:18,0:18:42.62:0,43,743	0/1:20,0:18:94.54:111,0,95	0/1:17,0:16:99:108,0,210	0/1:16,0:15:35.02:163,0,35	0/1:26,0:25:99:177,0,130	0/1:18,0:16:99:118,0,154	0/1:14,0:11:87.20:87,0,101	0/1:19,0:20:16.54:186,0,17	1/1:7,0:7:5.97:51,6,0	0/1:11,0:11:50.28:50,0,74	0/0:16,0:16:42.13:0,42,721	0/0:12,0:12:33.11:0,33,568	0/1:24,0:20:90.22:90,0,95	0/1:18,0:17:57.34:190,0,57	0/1:24,0:22:26.81:145,0,27	0/1:3,0:3:15.46:15,0,23
chr10	64808980	.	A	AAAC	12171.16	PASS	AB=0.660;AC=24;AF=0.429;AN=56;BaseQRankSum=2.837;DP=516;FS=2.250;HRun=0;HaplotypeScore=119.9779;InbreedingCoeff=-0.4734;MQ=43.47;MQ0=12;MQRankSum=-3.771;QD=28.24;ReadPosRankSum=4.957;VQSLOD=5.2490;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:10,15:27:99:644,0,122	0/1:2,8:10:15.13:465,0,15	0/0:13,0:8:7.38:0,7,114	0/0:17,0:6:8.99:0,9,97	0/1:14,20:35:44.25:967,0,44	0/1:8,11:19:99:671,0,104	0/1:4,8:11:52.68:339,0,53	0/1:33,0:32:99:264,0,152	0/0:10,0:9:21.03:0,21,325	0/1:15,14:28:99:948,0,227	0/1:7,11:18:83.56:642,0,84	0/1:13,13:24:82.35:981,0,82	0/0:17,0:17:41.79:0,42,708	0/1:6,14:18:92.37:455,0,92	0/1:8,9:16:99:509,0,202	0/1:5,11:15:28.04:561,0,28	0/1:9,19:29:96.81:771,0,97	0/1:9,10:17:99:388,0,174	0/1:11,4:12:83.55:240,0,84	1/1:6,14:20:16.72:817,17,0	1/1:1,6:9:6.02:107,6,0	0/1:7,3:10:71.11:228,0,71	0/0:15,0:15:42.13:0,42,687	0/0:12,0:12:33.11:0,33,540	0/1:12,10:19:57.21:499,0,57	0/1:8,10:17:58.31:673,0,58	0/1:10,14:22:6.16:881,0,6	0/1:1,2:3:22.77:120,0,23
chr10	64809515	.	T	TGTC	2658.61	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-6.357;DP=706;FS=19.478;HRun=0;HaplotypeScore=99.9199;InbreedingCoeff=0.9269;MQ=67.84;MQ0=0;MQRankSum=-2.215;QD=42.20;ReadPosRankSum=-2.132;VQSLOD=3.1183;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,33:36:69.08:1561,69,0	0/0:7,0:7:21.07:0,21,344	0/0:8,0:8:5.99:0,6,44	0/0:8,0:8:10.65:0,11,122	0/0:19,0:19:54.17:0,54,863	0/0:22,0:22:66.23:0,66,1099	0/0:23,0:23:60.19:0,60,970	1/1:8,19:27:60.16:1219,60,0	0/0:20,0:20:54.16:0,54,849	0/0:25,0:25:69.23:0,69,1123	0/0:17,0:17:45.14:0,45,717	0/0:30,0:30:84.29:0,84,1388	0/0:31,0:31:81.27:0,81,1314	0/0:37,0:37:99:0,102,1673	0/0:35,0:34:96.31:0,96,1570	0/0:31,0:31:78.25:0,78,1266	0/0:33,0:33:87.23:0,87,1367	0/0:15,0:15:30.10:0,30,488	0/0:22,0:22:57.19:0,57,903	0/0:34,0:34:96.30:0,96,1539	0/0:38,0:38:99:0,108,1763	0/0:27,0:27:78.23:0,78,1244	0/0:21,0:21:54.17:0,54,870	0/0:47,0:47:99:0,138,2285	0/0:24,0:24:72.23:0,72,1168	0/0:28,0:28:81.27:0,81,1322	0/0:27,0:27:78.24:0,78,1240	0/0:14,0:14:39.13:0,39,650
chr10	64809674	.	CTT	C	5867.79	PASS	AC=38;AF=0.704;AN=54;BaseQRankSum=10.416;DP=523;FS=27.143;HRun=3;HaplotypeScore=89.8411;InbreedingCoeff=0.9959;MQ=73.42;MQ0=20;MQRankSum=-2.169;QD=20.45;ReadPosRankSum=4.134;VQSLOD=1.4498;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:18:39.44:0,39,338	1/1:8,0:8:23.97:200,24,0	0/0:30,0:17:44.19:0,44,416	0/0:56,0:38:26.82:0,27,445	1/1:17,0:16:29.99:243,30,0	1/1:11,0:10:26.86:208,27,0	1/1:20,0:19:50.91:417,51,0	0/0:32,0:31:86.15:0,86,802	0/0:18,0:18:24.48:0,24,301	1/1:21,0:20:54:495,54,0	./.	1/1:24,0:22:62.74:498,63,0	0/0:25,0:23:62.81:0,63,535	1/1:20,0:20:56.40:452,56,0	1/1:16,0:16:42.38:340,42,0	1/1:15,0:15:35.42:299,35,0	1/1:16,0:16:41.60:337,42,0	1/1:14,0:14:38.79:298,39,0	1/1:9,0:8:20.99:187,21,0	1/1:16,0:16:38.30:298,38,0	1/1:17,0:17:39.40:319,39,0	1/1:17,0:16:38.94:322,39,0	0/0:17,0:17:39.49:0,39,351	0/0:32,0:32:86.92:0,87,748	1/1:9,0:8:20.98:176,21,0	1/1:16,0:16:44.52:387,45,0	1/1:12,0:11:32.86:252,33,0	1/1:9,0:8:17.93:141,18,0
chr10	64810455	.	T	TATCACCG	43848.16	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=10.135;DP=658;FS=2.784;HRun=0;HaplotypeScore=165.6725;InbreedingCoeff=0.9992;MQ=66.82;MQ0=0;MQRankSum=-18.724;QD=94.09;ReadPosRankSum=0.770;VQSLOD=5.5871;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:34:99:0,102,2606	1/1:6,8:14:33.11:1139,33,0	0/0:19,0:19:47.19:0,47,1086	0/0:13,0:13:32.78:0,33,774	1/1:8,20:28:54.19:2067,54,0	1/1:8,15:23:51.17:1955,51,0	1/1:5,19:25:66.23:2559,66,0	0/0:40,0:40:99:0,102,2590	0/0:23,0:23:66.22:0,66,1653	1/1:6,15:23:63.20:2217,63,0	1/1:4,10:17:36.12:1405,36,0	1/1:8,22:33:87.30:3152,87,0	0/0:27,0:27:81.25:0,81,1997	1/1:10,17:30:81.28:3001,81,0	1/1:9,19:32:78.27:2869,78,0	1/1:3,22:25:75.26:2845,75,0	1/1:6,15:21:44.74:1730,45,0	1/1:4,12:17:42.14:1669,42,0	1/1:12,12:25:75.14:2432,75,0	1/1:8,17:25:63.22:2479,63,0	1/1:6,13:23:48.16:1840,48,0	1/1:5,12:17:42.14:1676,42,0	0/0:19,0:19:54.17:0,54,1341	0/0:16,0:16:48.16:0,48,1266	1/1:7,16:25:63.22:2492,63,0	1/1:8,19:30:84.27:2977,84,0	1/1:8,17:25:66.23:2506,66,0	1/1:2,5:7:21.07:838,21,0
chr10	64811812	.	GTGTT	G	15314.22	PASS	AB=0.949;AC=45;AF=0.804;AN=56;BaseQRankSum=14.238;DP=807;FS=13.331;HRun=0;HaplotypeScore=200.8314;InbreedingCoeff=0.8938;MQ=55.23;MQ0=4;MQRankSum=-12.825;QD=22.96;ReadPosRankSum=2.810;VQSLOD=3.6689;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:17,26:43:65.78:1069,66,0	1/1:2,10:12:19.31:332,19,0	0/0:35,0:24:30.10:0,30,658	0/0:33,0:31:50.67:0,51,1133	1/1:16,0:29:29.90:279,30,0	1/1:12,22:33:54.18:875,54,0	1/1:11,20:32:48.16:756,48,0	1/1:21,7:28:21.07:338,21,0	0/0:30,1:31:20.59:0,21,1502	1/1:22,13:35:39.13:632,39,0	1/1:8,15:24:30.10:484,30,0	1/1:9,24:33:66.23:1069,66,0	0/0:26,0:26:63.22:0,63,1485	1/1:5,18:24:51.17:826,51,0	1/1:13,30:43:75.26:1214,75,0	1/1:6,21:27:60.20:971,60,0	1/1:11,18:29:48.16:778,48,0	1/1:7,9:16:21.07:340,21,0	1/1:15,3:17:9.02:122,9,0	1/1:18,20:38:60.15:918,60,0	1/1:16,6:22:9.29:187,9,0	1/1:13,18:31:51.13:797,51,0	0/0:15,0:15:33.11:0,33,799	0/1:35,2:36:3.96:4,0,2005	1/1:11,17:28:42.14:681,42,0	1/1:15,23:37:69.21:1088,69,0	1/1:7,23:32:69.24:1116,69,0	1/1:5,9:14:27.09:438,27,0
chr10	64812262	.	TACACACACAC	T	6344.88	PASS	AB=0.659;AC=34;AF=0.654;AN=52;BaseQRankSum=10.118;DP=669;FS=9.768;HRun=0;HaplotypeScore=209.3926;InbreedingCoeff=0.6895;MQ=60.85;MQ0=38;MQRankSum=-8.088;QD=18.66;ReadPosRankSum=2.225;VQSLOD=3.0146;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:33:34.11:0,34,1387	1/1:5,7:12:6.95:266,7,0	0/0:72,0:26:3.01:0,3,46	./.	0/0:30,0:31:51.18:0,51,2033	0/1:10,10:23:25.49:356,0,25	1/1:11,9:21:13.28:291,13,0	0/0:23,0:23:36.12:0,36,1219	0/0:16,0:20:37.01:0,37,1381	1/1:14,10:25:30.08:715,30,0	1/1:4,7:11:9.03:216,9,0	1/1:11,10:22:14.76:419,15,0	0/0:20,0:23:51.17:0,51,1962	1/1:8,5:14:6.01:120,6,0	1/1:14,14:31:23.74:629,24,0	1/1:14,11:25:15.05:450,15,0	1/1:12,4:19:16.60:414,17,0	1/1:13,5:18:6.02:180,6,0	1/1:9,5:14:15:295,15,0	1/1:13,5:19:1.65:100,2,0	./.	1/1:15,4:20:9.03:218,9,0	0/0:12,0:12:27.09:0,27,1022	0/0:22,0:23:36.12:0,36,1480	0/1:9,7:17:7.38:254,0,7	1/1:13,8:21:24.05:589,24,0	1/1:9,11:21:22.04:653,22,0	1/1:2,4:6:6.02:180,6,0
chr10	64812711	.	G	GTCCCATAGA	14734.34	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=11.903;DP=462;FS=9.513;HRun=0;HaplotypeScore=216.6717;InbreedingCoeff=0.9721;MQ=58.80;MQ0=0;MQRankSum=-14.971;QD=45.76;ReadPosRankSum=0.454;VQSLOD=3.0160;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:51.17:0,51,1582	1/1:8,0:8:16.67:301,17,0	0/0:9,0:9:16.46:0,16,568	0/0:6,0:6:15.05:0,15,405	1/1:25,0:25:35.06:1410,35,0	1/1:12,0:12:11.32:406,11,0	1/1:10,1:11:21.18:460,21,0	0/0:28,0:28:78.27:0,78,2234	0/0:19,0:19:54.19:0,54,1614	1/1:25,0:25:44.49:1312,44,0	1/1:12,0:12:13.78:399,14,0	1/1:18,0:18:39.57:705,40,0	0/0:26,0:26:75.24:0,75,2252	1/1:19,0:19:28.82:1145,29,0	1/1:15,0:15:25.34:352,25,0	1/1:23,0:23:51.23:927,51,0	1/1:19,3:21:46.12:1388,46,0	1/1:10,0:10:26.59:183,27,0	1/1:17,0:17:26.72:1355,27,0	1/1:21,0:21:35.92:806,36,0	1/1:6,0:6:9.92:326,10,0	1/1:11,0:11:21.50:599,21,0	0/0:24,0:24:72.23:0,72,2090	0/0:7,0:7:21.07:0,21,556	1/1:17,0:17:28.39:562,28,0	1/1:15,0:15:33.02:578,33,0	1/1:27,0:26:35.17:1127,35,0	1/1:8,0:8:18.87:394,19,0
chr10	64812712	.	T	TC	8603.38	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=15.495;DP=451;FS=9.366;HRun=1;HaplotypeScore=162.2352;InbreedingCoeff=0.9896;MQ=58.85;MQ0=0;MQRankSum=-15.155;QD=27.49;ReadPosRankSum=1.280;VQSLOD=3.6630;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:51.16:0,51,657	1/1:1,7:8:24.01:229,24,0	0/0:9,0:9:22.60:0,23,260	0/0:6,0:6:15.03:0,15,174	1/1:4,20:24:63.06:611,63,0	1/1:0,12:12:35.91:346,36,0	1/1:4,7:11:29.68:264,30,0	0/0:28,0:28:81.26:0,81,1041	0/0:19,0:19:54.18:0,54,701	1/1:5,20:25:71.54:729,72,0	1/1:2,9:11:27.04:258,27,0	1/1:7,11:18:53.88:485,54,0	0/0:26,0:26:75.23:0,75,960	1/1:6,13:19:53.76:473,54,0	1/1:3,12:15:44.97:413,45,0	1/1:6,17:23:69.10:693,69,0	1/1:11,9:19:53:458,53,0	1/1:2,8:10:30:311,30,0	1/1:4,12:16:47.71:502,48,0	1/1:4,17:21:57.07:550,57,0	1/1:0,5:5:12.02:129,12,0	1/1:1,10:11:33.06:337,33,0	0/0:24,0:24:72.22:0,72,921	0/0:7,0:7:21.07:0,21,272	1/1:1,16:17:45.09:447,45,0	1/1:4,9:13:39.09:416,39,0	1/1:6,21:26:74.70:736,75,0	1/1:3,4:7:21.04:216,21,0
chr10	64812716	.	TTTTTTTA	T	15845.02	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=15.520;DP=380;FS=16.520;HRun=0;HaplotypeScore=157.4732;InbreedingCoeff=0.9814;MQ=61.91;MQ0=0;MQRankSum=-15.515;QD=65.21;ReadPosRankSum=4.724;VQSLOD=4.1447;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:57.20:0,57,2181	1/1:0,7:7:21.07:473,21,0	0/0:9,0:9:27.09:0,27,993	0/0:7,0:7:21.06:0,21,667	1/1:0,18:18:51.18:1114,51,0	1/1:0,12:12:36.12:807,36,0	1/1:1,7:8:24.08:556,24,0	0/0:28,0:28:84.27:0,84,2927	0/0:18,0:18:54.18:0,54,1994	1/1:0,19:19:57.20:1318,57,0	1/1:0,9:9:27.09:597,27,0	1/1:2,10:12:32.70:718,33,0	0/0:25,0:25:75.26:0,75,2956	1/1:0,13:13:39.13:856,39,0	1/1:0,12:12:36.12:802,36,0	1/1:0,17:17:51.18:1150,51,0	1/1:3,9:12:36.12:858,36,0	1/1:1,7:8:21.07:497,21,0	1/1:1,12:13:35.81:829,36,0	1/1:2,15:17:47.37:1015,47,0	1/1:0,4:4:9.03:200,9,0	1/1:0,10:10:30.10:668,30,0	0/0:23,0:23:69.22:0,69,2749	0/0:7,0:7:21.07:0,21,882	1/1:0,16:16:45.15:1011,45,0	1/1:1,9:10:26.83:623,27,0	1/1:1,21:22:66.23:1475,66,0	1/1:0,4:4:12.04:277,12,0
chr10	64812779	.	AT	A	3147.54	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-2.234;DP=465;FS=15.246;HRun=7;HaplotypeScore=91.6854;InbreedingCoeff=0.8890;MQ=68.21;MQ0=5;MQRankSum=-3.651;QD=11.53;ReadPosRankSum=0.531;VQSLOD=1.2451;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:19.94:0,20,84	1/1:6,0:6:11.91:93,12,0	0/0:40,1:18:30.10:0,30,220	0/0:16,0:11:10.71:0,11,93	0/0:4,0:15:34.74:0,35,194	1/1:4,16:20:20.77:196,21,0	1/1:2,16:18:36.02:355,36,0	0/0:29,0:29:37.71:0,38,173	0/0:14,0:14:36.02:0,36,373	1/1:4,13:17:26.87:225,27,0	1/1:3,6:9:2.99:31,3,0	1/1:5,10:15:17.31:140,17,0	0/0:18,0:18:42.09:0,42,470	1/1:5,11:16:14.94:139,15,0	1/1:5,18:23:35.97:342,36,0	1/1:5,11:16:26.97:251,27,0	1/1:7,18:25:44.56:424,45,0	1/1:3,6:9:12.01:121,12,0	1/1:12,0:12:14.84:110,15,0	1/1:7,6:13:14.86:117,15,0	1/1:0,11:11:5.14:59,5,0	1/1:4,11:15:11.97:112,12,0	0/0:15,0:15:38.97:0,39,363	0/0:14,0:14:36.04:0,36,389	1/1:5,11:16:23.16:192,23,0	1/1:4,6:10:8.60:69,9,0	1/1:8,14:21:41.88:380,42,0	0/0:3,0:3:0:0,0,0
chr10	64812785	.	TTG	T	567.75	PASS	AB=0.979;AC=20;AF=0.357;AN=56;BaseQRankSum=0.053;DP=470;FS=0.000;HRun=0;HaplotypeScore=88.8515;InbreedingCoeff=-0.1645;MQ=68.62;MQ0=5;MQRankSum=-1.927;QD=2.01;ReadPosRankSum=-4.557;VQSLOD=0.2698;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:25:51.30:0,51,268	0/1:8,0:8:28.73:58,0,29	0/0:41,0:18:30.67:0,31,318	0/0:17,0:11:7.36:0,7,134	0/0:16,0:16:4.60:0,5,92	0/1:18,0:18:0.85:1,0,37	0/1:17,1:18:24.11:33,0,24	0/1:27,0:27:7.59:8,0,206	0/0:14,0:14:30.26:0,30,533	1/1:17,0:17:18.33:145,18,0	0/1:13,0:13:2.76:3,0,82	0/1:14,0:14:29.74:30,0,62	0/0:17,0:17:51.08:0,51,702	1/1:12,1:13:0.05:36,0,0	0/1:24,0:24:17.70:18,0,54	0/1:14,0:14:21.63:26,0,22	0/1:25,2:27:55.99:84,0,56	0/0:7,0:7:5.28:0,5,28	0/1:10,0:10:26.12:26,0,32	0/1:14,1:15:69.22:73,0,69	0/0:12,0:12:4.81:0,5,26	0/1:16,1:17:41.33:41,0,51	0/0:16,0:16:46.96:0,47,466	0/0:16,0:16:48.05:0,48,645	0/1:19,1:20:50.51:51,0,83	1/1:8,0:8:4.94:38,5,0	0/1:19,0:18:17.65:56,0,18	0/0:5,0:5:10.90:0,11,69
chr10	64812786	.	TG	T	1459.55	PASS	AB=0.992;AC=29;AF=0.518;AN=56;BaseQRankSum=8.693;DP=478;FS=11.593;HRun=11;HaplotypeScore=79.9949;InbreedingCoeff=0.0440;MQ=68.49;MQ0=5;MQRankSum=-0.033;QD=3.82;ReadPosRankSum=6.170;VQSLOD=-0.3458;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,23:25:62.67:504,63,0	0/1:8,0:8:9.15:9,0,35	0/1:39,0:16:8.45:8,0,91	0/0:17,1:11:7.46:0,7,63	1/1:14,0:14:22.48:102,22,0	0/1:18,0:18:12.10:12,0,25	1/1:18,0:18:7.67:66,8,0	1/1:4,23:27:60.66:421,61,0	0/0:14,0:14:18.06:0,18,234	1/1:17,0:17:6.76:29,7,0	0/1:13,0:13:6.76:7,0,80	0/1:16,1:17:44.33:45,0,44	0/0:16,0:16:35.96:0,36,323	1/1:15,0:15:12.11:46,12,0	0/1:25,0:25:31.79:34,0,32	0/1:14,0:14:7.29:26,0,7	0/1:28,0:28:19.91:98,0,20	0/1:7,0:7:9.56:26,0,10	0/0:10,0:10:12.47:0,12,52	0/1:15,0:15:33.95:34,0,68	0/1:15,0:15:3.30:3,0,16	0/1:17,0:17:31.39:31,0,43	0/0:17,0:17:17.01:0,17,135	0/0:17,0:17:35.99:0,36,339	0/1:20,1:21:54.49:76,0,54	1/1:8,0:8:1.55:4,2,0	1/1:20,0:19:1.36:57,1,0	0/0:4,0:4:10.90:0,11,69
chr10	64813413	.	T	TA	4121.73	PASS	AB=0.664;AC=35;AF=0.625;AN=56;BaseQRankSum=-5.727;DP=582;FS=8.465;HRun=13;HaplotypeScore=71.9606;InbreedingCoeff=0.5788;MQ=74.08;MQ0=0;MQRankSum=-1.185;QD=10.82;ReadPosRankSum=2.204;VQSLOD=2.9344;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:33:76.01:0,76,502	1/1:1,5:6:9.01:84,9,0	0/0:23,0:20:19.58:0,20,101	0/1:12,1:10:13.70:14,0,48	0/0:28,0:32:55.21:0,55,352	1/1:8,23:31:4.77:468,5,0	1/1:12,11:24:23.86:210,24,0	0/0:27,0:27:59.21:0,59,395	0/0:14,0:14:10.16:0,10,180	1/1:10,14:24:21.27:289,21,0	1/1:6,11:18:13.57:196,14,0	0/1:8,15:23:14.33:142,0,14	0/0:20,2:22:3.22:0,3,220	1/1:5,18:23:24.03:223,24,0	1/1:5,14:19:20.96:186,21,0	1/1:3,17:20:35.57:334,36,0	1/1:7,13:20:5.63:180,6,0	1/1:3,12:16:32.87:293,33,0	1/1:5,12:17:34.38:256,34,0	1/1:7,13:20:16.94:244,17,0	0/1:6,8:14:2.56:121,0,3	1/1:7,13:21:21.29:174,21,0	0/0:23,1:24:12.59:0,13,223	0/0:20,2:24:7.78:0,8,316	0/1:3,12:15:3.19:102,0,3	1/1:9,13:23:6.42:285,6,0	0/1:6,13:19:1.68:119,0,2	1/1:2,13:15:7.88:204,8,0
chr10	64813824	.	G	GAGA	5827.41	PASS	AB=1.000;AC=54;AF=0.964;AN=56;BaseQRankSum=0.099;DP=200;FS=5.113;HRun=0;HaplotypeScore=163.6293;InbreedingCoeff=-0.0980;MQ=45.15;MQ0=0;MQRankSum=-2.041;QD=29.14;ReadPosRankSum=1.321;VQSLOD=5.0406;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:13:18.02:259,18,0	1/1:3,0:3:3.01:47,3,0	1/1:5,0:2:5.80:33,6,0	0/1:7,0:5:30.24:30,0,43	1/1:10,0:10:18.06:278,18,0	1/1:0,10:11:3.01:56,3,0	1/1:9,0:9:10.32:328,10,0	1/1:5,0:5:12:168,12,0	1/1:4,0:4:8.90:60,9,0	1/1:13,0:13:31.67:546,32,0	1/1:3,0:3:4.26:50,4,0	1/1:7,0:7:15.47:198,15,0	1/1:5,0:5:14.91:116,15,0	1/1:11,0:11:30.10:528,30,0	1/1:12,0:12:32.33:481,32,0	1/1:10,0:10:27.09:454,27,0	1/1:1,0:1:3.01:53,3,0	1/1:1,0:1:3.01:51,3,0	1/1:5,0:5:8.41:130,8,0	1/1:11,0:11:24.03:358,24,0	1/1:8,0:8:7.57:88,8,0	1/1:7,0:7:9.01:136,9,0	1/1:5,0:5:5.90:38,6,0	0/1:8,0:8:5.01:73,0,5	1/1:5,0:4:9.03:183,9,0	1/1:13,0:13:39.13:730,39,0	1/1:2,0:2:2.16:65,2,0	1/1:6,0:6:18.06:293,18,0
chr10	64813884	.	A	AAGT	471.50	PASS	AB=0.823;AC=17;AF=0.708;AN=24;BaseQRankSum=2.392;DP=44;FS=7.129;HRun=0;HaplotypeScore=69.5276;InbreedingCoeff=-0.1233;MQ=25.74;MQ0=6;MQRankSum=0.849;QD=12.41;ReadPosRankSum=0.952;VQSLOD=2.4921;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,0:2:5.80:38,6,0	./.	./.	./.	./.	./.	0/1:3,1:4:9.12:94,0,9	1/1:4,0:1:1.82:5,2,0	./.	0/1:2,1:3:49.45:61,0,49	1/1:1,1:2:5.75:68,6,0	./.	0/0:2,0:1:2.92:0,3,17	./.	./.	1/1:1,1:2:2.99:64,3,0	0/1:2,1:2:2.04:2,0,7	0/1:2,0:2:3.62:17,0,4	./.	./.	0/1:10,3:11:36.81:130,0,37	./.	1/1:2,0:1:2.84:14,3,0	./.	./.	1/1:0,1:1:3.01:73,3,0	./.	./.
chr10	64813890	.	A	AAAAG	1017.74	PASS	AB=0.767;AC=20;AF=0.526;AN=38;BaseQRankSum=-0.264;DP=70;FS=13.278;HRun=0;HaplotypeScore=68.3770;InbreedingCoeff=-0.0575;MQ=24.77;MQ0=13;MQRankSum=-0.214;QD=19.96;ReadPosRankSum=-0.441;VQSLOD=2.0437;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:3,0:3:5.20:0,5,28	./.	./.	./.	./.	0/0:2,0:2:2.97:0,3,20	0/1:2,3:5:8.52:184,0,9	1/1:5,0:2:1.43:4,1,0	./.	0/1:2,2:3:47.65:149,0,48	1/1:1,1:2:5.99:104,6,0	1/1:1,1:1:3.01:39,3,0	0/0:2,0:1:2.98:0,3,22	1/1:2,0:2:3.01:50,3,0	0/0:1,0:1:2.92:0,3,17	0/1:1,1:2:33.44:79,0,33	0/1:5,1:4:23.82:42,0,24	0/1:4,0:4:25.16:68,0,25	./.	1/1:1,0:1:3.01:36,3,0	0/1:11,4:12:56.91:273,0,57	./.	0/0:3,0:2:1.55:0,2,4	0/0:2,0:2:0.47:0,0,1	1/1:1,0:1:2.99:23,3,0	1/1:1,1:1:3.01:83,3,0	./.	./.
chr10	64813894	.	GAA	G	464.97	PASS	AB=0.971;AC=29;AF=0.763;AN=38;BaseQRankSum=-0.199;DP=82;FS=1.320;HRun=2;HaplotypeScore=74.7794;InbreedingCoeff=-0.0183;MQ=24.36;MQ0=18;MQRankSum=0.840;QD=6.46;ReadPosRankSum=0.442;VQSLOD=0.0541;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,1:4:5.08:37,5,0	./.	./.	./.	./.	0/1:2,0:2:8.71:9,0,47	0/1:5,1:5:29.99:43,0,30	1/1:6,1:2:5.50:47,6,0	./.	0/1:4,0:3:42.76:43,0,49	1/1:3,0:2:5.97:45,6,0	1/1:2,0:1:2.04:6,2,0	1/1:1,1:1:3.01:47,3,0	1/1:2,1:3:5.97:60,6,0	0/0:1,0:1:1.82:0,2,5	1/1:3,0:3:4.87:17,5,0	0/1:8,0:6:2.39:2,0,46	1/1:4,0:4:4.71:29,5,0	./.	1/1:1,1:2:5.65:33,6,0	0/1:15,0:12:3.96:79,0,4	./.	1/1:2,1:2:3.01:43,3,0	0/0:2,0:2:0.28:0,0,45	1/1:1,1:2:4.69:20,5,0	1/1:2,0:1:2.90:16,3,0	./.	./.
chr10	64813896	.	A	AG	336.90	PASS	AB=0.967;AC=25;AF=0.625;AN=40;BaseQRankSum=1.949;DP=96;FS=0.000;HRun=1;HaplotypeScore=89.3679;InbreedingCoeff=0.0779;MQ=24.53;MQ0=18;MQRankSum=-1.266;QD=4.55;ReadPosRankSum=0.933;VQSLOD=0.1907;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:5:1.63:0,2,12	./.	./.	./.	./.	0/0:3,0:3:4.19:0,4,41	0/1:6,0:5:2.97:3,0,23	1/1:9,1:4:6.02:71,6,0	./.	0/1:5,0:4:30:45,0,30	1/1:2,1:2:5.50:26,5,0	0/0:2,0:1:2.04:0,2,6	1/1:2,0:1:3:27,3,0	1/1:5,0:5:7.83:39,8,0	1/1:1,0:1:0.47:1,0,0	0/1:3,0:3:10.69:20,0,11	0/1:9,0:7:20.28:20,0,36	1/1:5,0:5:4.68:18,5,0	./.	1/1:2,0:2:5.17:20,5,0	0/1:12,3:12:12.33:88,0,12	0/0:5,0:1:2.04:0,2,6	1/1:3,0:2:3:27,3,0	0/0:4,0:4:2:0,2,37	1/1:2,0:2:2.92:8,3,0	1/1:3,0:1:3.01:41,3,0	./.	./.
chr10	64813899	.	A	AGT	291.60	PASS	AB=0.978;AC=17;AF=0.425;AN=40;BaseQRankSum=-0.007;DP=110;FS=5.672;HRun=0;HaplotypeScore=95.5597;InbreedingCoeff=-0.2067;MQ=23.74;MQ0=25;MQRankSum=-0.737;QD=3.60;ReadPosRankSum=1.138;VQSLOD=1.6865;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:6:10.64:0,11,97	./.	./.	./.	./.	0/0:4,0:3:6.16:0,6,58	0/1:6,0:5:9.27:9,0,11	0/1:12,1:5:21.51:42,0,22	./.	0/1:5,0:4:27.97:28,0,53	1/1:2,1:2:3.46:24,3,0	1/1:2,0:1:2.04:6,2,0	0/0:2,0:1:3:0,3,27	0/1:5,0:5:1.20:16,0,1	0/0:1,0:1:0.47:0,0,1	0/1:3,0:3:25.92:41,0,26	0/1:11,0:7:11.18:11,0,79	0/1:5,0:5:38.02:38,0,41	./.	0/1:2,0:2:4.94:5,0,14	0/1:12,3:12:88.11:137,0,88	0/0:8,0:3:3.99:0,4,15	0/0:4,0:3:2.92:0,3,17	0/1:5,0:5:2.95:3,0,38	0/1:2,0:2:5.70:7,0,6	1/1:4,0:2:3.01:42,3,0	./.	./.
chr10	64813906	.	GA	G	938.38	PASS	AB=0.839;AC=27;AF=0.643;AN=42;BaseQRankSum=-2.162;DP=144;FS=13.619;HRun=2;HaplotypeScore=99.1950;InbreedingCoeff=-0.2823;MQ=23.37;MQ0=32;MQRankSum=-0.772;QD=7.11;ReadPosRankSum=0.553;VQSLOD=-0.3896;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:6,1:6:10.09:53,0,10	./.	./.	./.	./.	0/1:3,1:3:24.86:25,0,56	0/1:4,3:6:39.70:95,0,40	0/1:14,1:6:3.50:27,0,4	./.	0/1:3,2:4:32.80:58,0,33	1/1:3,1:3:5.51:41,6,0	0/0:1,2:1:0.47:0,0,1	1/1:1,2:2:2.77:38,3,0	0/1:5,0:5:23.99:33,0,24	1/1:1,0:1:2.68:11,3,0	0/1:3,1:4:0.89:50,0,1	0/1:12,2:10:49.06:60,0,49	0/1:9,1:9:16.01:138,0,16	1/1:6,0:1:1.25:3,1,0	1/1:3,0:3:9.02:98,9,0	0/1:13,5:15:29.94:171,0,30	1/1:15,0:8:5.38:37,5,0	1/1:3,1:3:3.01:36,3,0	0/0:4,1:5:9.25:0,9,79	1/1:2,0:2:6:56,6,0	0/1:4,1:3:15:29,0,15	./.	./.
chr10	64813918	.	G	GAGA	418.78	PASS	AB=0.965;AC=14;AF=0.292;AN=48;BaseQRankSum=3.585;DP=179;FS=19.147;HRun=0;HaplotypeScore=118.0653;InbreedingCoeff=-0.1185;MQ=40.72;MQ0=35;MQRankSum=-1.033;QD=4.23;ReadPosRankSum=0.706;VQSLOD=1.2356;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:7,1:7:59.69:60,0,82	0/0:2,0:2:3:0,3,26	0/1:3,0:2:4.07:7,0,4	0/1:5,0:3:3.45:3,0,4	./.	0/1:4,0:3:24.75:25,0,75	0/0:8,0:7:20.98:0,21,242	0/0:15,0:6:5.97:0,6,52	./.	0/0:7,0:5:10.71:0,11,111	0/1:5,0:4:3.34:6,0,3	0/0:4,0:2:3.01:0,3,38	0/0:3,0:2:3.01:0,3,51	1/1:7,0:6:4.44:86,4,0	0/0:1,0:1:3:0,3,27	0/0:6,0:6:12.88:0,13,100	0/1:13,1:10:79.56:127,0,80	0/1:11,1:11:65.38:65,0,142	0/0:11,0:6:17.04:0,17,163	0/1:5,0:5:7.59:8,0,27	0/1:21,0:18:3.35:3,0,170	0/0:16,0:9:6.32:0,6,35	0/0:4,0:3:2.80:0,3,13	0/1:4,1:5:0.44:107,0,0	0/1:2,0:2:5.99:25,0,6	0/1:7,0:5:23.67:26,0,24	./.	./.
chr10	64813920	.	A	AAAAG	522.93	PASS	AB=0.917;AC=16;AF=0.333;AN=48;BaseQRankSum=4.219;DP=180;FS=0.817;HRun=0;HaplotypeScore=120.5842;InbreedingCoeff=-0.1565;MQ=44.80;MQ0=35;MQRankSum=-0.977;QD=4.51;ReadPosRankSum=0.683;VQSLOD=2.5140;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:7,0:7:46.34:46,0,93	0/0:2,0:2:3.01:0,3,31	0/1:4,0:3:3.60:4,0,20	0/0:6,0:3:1.61:0,2,17	./.	0/1:3,1:3:47.67:48,0,98	0/0:8,0:7:20.98:0,21,252	0/0:15,0:6:2.64:0,3,22	./.	0/0:7,0:5:9.67:0,10,114	0/1:5,0:4:0.79:13,0,1	0/0:4,0:2:2.97:0,3,42	0/0:3,0:2:3.90:0,4,64	1/1:4,3:6:12.50:148,13,0	0/0:2,0:1:3.01:0,3,37	0/1:5,1:6:26.23:26,0,82	0/1:12,1:10:70.10:70,0,126	0/1:11,1:11:59.65:60,0,184	0/0:10,0:6:18.06:0,18,288	0/1:3,2:5:4.17:60,0,4	0/1:20,1:18:54.95:55,0,223	0/1:15,1:9:11.93:12,0,16	0/0:4,0:3:1.25:0,1,3	0/1:5,0:5:0.08:0,0,60	1/1:1,1:2:4.57:56,5,0	0/1:6,1:5:19.04:58,0,19	./.	./.
chr10	64813937	.	GA	G	293.77	PASS	AB=0.894;AC=20;AF=0.400;AN=50;BaseQRankSum=2.485;DP=176;FS=4.419;HRun=2;HaplotypeScore=132.2659;InbreedingCoeff=0.0397;MQ=65.31;MQ0=24;MQRankSum=-1.391;QD=2.60;ReadPosRankSum=1.290;VQSLOD=0.0066;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:7,1:7:27.73:28,0,39	0/0:2,0:2:0:0,0,0	0/0:14,0:7:15.01:0,15,106	0/0:11,0:7:11.49:0,11,121	./.	0/0:7,0:6:12.33:0,12,79	0/1:7,3:10:44.74:61,0,45	0/0:9,0:4:3.01:0,3,36	0/0:3,0:3:3.46:0,3,42	0/1:5,1:4:21.66:22,0,52	1/1:4,1:5:2.46:28,2,0	0/1:5,0:3:5.03:6,0,5	0/0:2,0:1:1.55:0,2,4	0/1:8,0:7:2.50:13,0,2	1/1:2,0:1:1.55:4,2,0	1/1:3,2:5:0.15:15,0,0	1/1:9,1:8:8.04:102,8,0	0/1:10,1:10:18.14:18,0,71	0/0:6,0:5:2.74:0,3,18	0/1:5,1:6:0.55:20,0,1	0/1:11,2:13:23.01:35,0,23	1/1:12,1:9:8.13:55,8,0	0/0:3,0:2:0.89:0,1,2	0/0:4,0:4:8.56:0,9,45	0/1:3,0:3:2.46:13,0,2	0/1:5,1:6:6.96:7,0,32	./.	./.
chr10	64813949	.	GA	G	1056.52	PASS	AB=0.625;AC=38;AF=0.826;AN=46;BaseQRankSum=4.026;DP=127;FS=15.667;HRun=2;HaplotypeScore=119.3710;InbreedingCoeff=0.4188;MQ=81.81;MQ0=10;MQRankSum=-2.881;QD=12.01;ReadPosRankSum=3.198;VQSLOD=1.1510;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,1:6:12.75:73,13,0	1/1:0,1:1:3.01:30,3,0	0/0:19,0:9:18.67:0,19,143	0/0:14,0:9:21.09:0,21,211	./.	1/1:0,4:4:12.03:127,12,0	1/1:2,0:5:8.03:36,8,0	1/1:2,0:1:3.01:33,3,0	0/0:3,0:3:2.73:0,3,73	0/1:2,0:1:0:0,0,0	1/1:2,1:3:5.98:52,6,0	1/1:1,1:1:3.01:35,3,0	./.	1/1:1,5:6:15.04:173,15,0	./.	0/1:0,2:4:4.51:34,0,5	1/1:6,2:8:13.26:92,13,0	1/1:3,2:6:0.28:26,0,0	1/1:1,0:1:2.92:17,3,0	1/1:0,4:5:10.69:89,11,0	1/1:6,1:7:11.55:62,12,0	1/1:7,2:9:4.88:21,5,0	1/1:2,0:2:2.90:16,3,0	1/1:4,0:4:8.31:51,8,0	1/1:0,3:3:8.97:81,9,0	1/1:1,3:5:14.57:138,15,0	./.	./.
chr10	64813951	.	AGGAGCTG	A	2120.87	PASS	AB=1.000;AC=39;AF=0.848;AN=46;BaseQRankSum=5.341;DP=122;FS=8.341;HRun=0;HaplotypeScore=115.8612;InbreedingCoeff=0.4165;MQ=86.44;MQ0=6;MQRankSum=-3.275;QD=26.51;ReadPosRankSum=5.429;VQSLOD=2.0832;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,1:6:12.68:134,13,0	1/1:1,0:1:3.01:46,3,0	0/0:22,0:10:20.24:0,20,276	0/0:16,0:10:16.12:0,16,376	./.	1/1:4,0:4:12.04:250,12,0	1/1:4,0:4:11.77:116,12,0	0/0:1,0:1:0.47:0,0,1	0/1:3,0:3:19.36:19,0,26	1/1:2,0:1:3.01:34,3,0	1/1:2,0:2:5.85:65,6,0	1/1:1,0:1:3.01:42,3,0	./.	1/1:6,0:6:15.05:270,15,0	./.	1/1:4,0:4:9.17:103,9,0	1/1:7,1:8:17.22:219,17,0	1/1:5,0:5:10.42:97,10,0	1/1:1,0:1:2.97:20,3,0	1/1:5,0:5:12.03:179,12,0	1/1:7,0:6:13.44:127,13,0	1/1:9,0:9:7.06:38,7,0	1/1:1,0:1:3.01:43,3,0	1/1:2,2:4:8.86:103,9,0	1/1:3,0:3:9.03:171,9,0	1/1:4,0:4:11.97:173,12,0	./.	./.
chr10	64813954	.	AGCTGGT	A	2183.65	PASS	AC=42;AF=0.913;AN=46;BaseQRankSum=5.501;DP=113;FS=10.259;HRun=0;HaplotypeScore=112.9251;InbreedingCoeff=0.4812;MQ=89.67;MQ0=5;MQRankSum=-3.029;QD=30.33;ReadPosRankSum=5.089;VQSLOD=2.5894;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,0:5:12.49:127,12,0	1/1:0,1:1:3.01:38,3,0	0/0:23,0:11:23.47:0,23,273	0/0:16,0:10:24.44:0,24,324	./.	1/1:0,4:4:12.04:226,12,0	1/1:4,0:4:12.03:134,12,0	1/1:1,0:1:1.82:5,2,0	1/1:2,0:3:5.27:91,5,0	1/1:2,0:1:3.01:37,3,0	1/1:1,1:2:5.61:58,6,0	1/1:0,1:1:3.01:49,3,0	./.	1/1:2,2:6:15.05:228,15,0	./.	1/1:1,2:4:11.57:113,12,0	1/1:5,0:8:20.93:241,21,0	1/1:2,0:4:11.36:112,11,0	1/1:1,0:1:2.99:24,3,0	1/1:1,4:5:12.01:162,12,0	1/1:3,1:6:14.68:130,15,0	1/1:1,0:3:8.96:71,9,0	1/1:1,0:1:3.01:41,3,0	1/1:2,0:4:8.94:91,9,0	1/1:0,2:3:9.03:148,9,0	1/1:0,3:4:12.04:178,12,0	./.	./.
chr10	64813955	.	GC	G	501.28	PASS	AB=1.000;AC=36;AF=0.857;AN=42;BaseQRankSum=4.078;DP=107;FS=18.962;HRun=1;HaplotypeScore=117.5813;InbreedingCoeff=0.3275;MQ=91.98;MQ0=3;MQRankSum=-2.619;QD=6.27;ReadPosRankSum=3.264;VQSLOD=-0.6187;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,1:5:2.58:8,3,0	1/1:1,0:1:3.01:32,3,0	0/0:23,0:11:22.19:0,22,197	0/1:15,0:10:2.74:3,0,184	./.	1/1:4,0:4:11.56:75,12,0	1/1:1,3:4:5.51:73,6,0	./.	0/0:3,0:3:5.84:0,6,48	1/1:0,1:1:3.01:35,3,0	1/1:2,0:2:3.01:32,3,0	1/1:1,0:1:0.89:2,1,0	./.	1/1:6,0:6:12.70:68,13,0	./.	1/1:3,1:4:6.40:50,6,0	0/1:7,0:7:5.89:41,0,6	1/1:4,0:4:1.72:4,2,0	./.	1/1:4,1:5:7.87:52,8,0	1/1:4,1:5:2.73:33,3,0	1/1:2,1:3:8.26:46,8,0	1/1:1,0:1:0.89:2,1,0	1/1:4,0:4:0.99:3,1,0	1/1:3,0:3:7.67:39,8,0	1/1:4,0:4:5.69:19,6,0	./.	./.
chr10	64813997	.	GGA	G	7223.19	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-4.762;DP=385;FS=5.428;HRun=0;HaplotypeScore=109.7216;InbreedingCoeff=0.8880;MQ=60.83;MQ0=10;MQRankSum=-0.630;QD=26.17;ReadPosRankSum=-0.422;VQSLOD=5.9252;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:32.98:0,33,408	1/1:4,0:4:12.02:144,12,0	0/0:17,0:9:16.84:0,17,222	0/0:16,0:10:20.76:0,21,262	1/1:15,0:15:30.03:391,30,0	1/1:20,0:20:31.92:479,32,0	1/1:15,1:16:35.04:431,35,0	0/0:25,0:25:57.58:0,58,729	0/0:9,0:8:24.05:0,24,296	1/1:15,1:16:11.41:470,11,0	1/1:6,0:6:18.06:235,18,0	1/1:11,0:10:27.04:352,27,0	0/0:5,0:5:15.05:0,15,206	1/1:10,0:10:26.54:347,27,0	1/1:12,0:12:29.30:364,29,0	1/1:20,1:21:6.18:655,6,0	1/1:11,2:13:25.59:335,26,0	1/1:13,0:12:0.90:209,1,0	1/1:14,0:13:12.34:391,12,0	1/1:20,0:20:51.03:635,51,0	1/1:32,0:30:65.90:860,66,0	1/1:5,13:17:3.73:43,4,0	0/0:10,0:10:29.96:0,30,407	0/0:13,0:13:21.74:0,22,276	1/1:7,0:6:14.24:145,14,0	1/1:12,0:12:23.44:328,23,0	1/1:9,0:9:13.22:202,13,0	1/1:7,0:7:15.05:206,15,0
chr10	64813999	.	A	AG	8075.31	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-3.548;DP=387;FS=7.362;HRun=2;HaplotypeScore=88.7669;InbreedingCoeff=0.9557;MQ=61.85;MQ0=8;MQRankSum=-1.365;QD=29.26;ReadPosRankSum=0.216;VQSLOD=3.8299;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:21.65:0,22,324	1/1:0,3:4:12.02:149,12,0	0/0:17,0:9:12.74:0,13,217	0/0:15,0:10:20.80:0,21,244	1/1:0,15:15:30.10:416,30,0	1/1:5,14:19:35.99:598,36,0	1/1:6,10:16:36.94:478,37,0	0/0:27,0:28:61.59:0,62,739	0/0:9,0:9:24.08:0,24,305	1/1:5,10:15:19.96:477,20,0	1/1:1,6:7:18.06:243,18,0	1/1:2,11:12:27.09:372,27,0	0/0:7,0:7:18.05:0,18,217	1/1:2,8:10:27.07:351,27,0	1/1:0,13:13:30.10:421,30,0	1/1:4,17:21:24.44:760,24,0	1/1:4,7:11:27.09:377,27,0	1/1:7,6:13:20.19:288,20,0	1/1:2,12:13:21.15:437,21,0	1/1:6,18:24:57.12:742,57,0	1/1:5,27:31:68.37:901,68,0	1/1:15,0:14:5.05:47,5,0	0/0:10,0:10:29.88:0,30,341	0/0:12,0:12:26.59:0,27,283	1/1:1,5:5:15.05:216,15,0	1/1:2,8:10:24.08:329,24,0	1/1:1,9:10:21.06:267,21,0	1/1:0,7:7:15.05:207,15,0
chr10	64814242	.	A	AGAATGACT	42885.84	PASS	AC=36;AF=0.667;AN=54;BaseQRankSum=-4.021;DP=718;FS=10.417;HRun=0;HaplotypeScore=183.7543;InbreedingCoeff=0.9989;MQ=88.52;MQ0=0;MQRankSum=-19.847;QD=96.81;ReadPosRankSum=0.205;VQSLOD=5.1033;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:58:99:0,157,4036	1/1:6,2:8:24.08:867,24,0	0/0:37,0:37:90:0,90,2107	0/0:33,0:32:72.23:0,72,1710	0/0:20,0:20:47.67:0,48,1178	1/1:5,15:22:48.16:1923,48,0	1/1:6,16:23:63.22:2338,63,0	0/0:20,0:20:48.16:0,48,1213	0/0:29,0:29:81.27:0,81,2093	1/1:9,22:34:96.30:3785,96,0	1/1:2,8:11:21.07:839,21,0	1/1:5,26:31:87.30:3544,87,0	0/0:28,0:28:81.28:0,81,2175	1/1:4,22:26:72.25:2998,72,0	1/1:16,28:44:99:4062,105,0	1/1:16,24:41:99:4014,99,0	1/1:5,10:15:36.12:1384,36,0	1/1:1,9:10:30.10:1291,30,0	1/1:17,6:23:63.14:2231,63,0	1/1:8,12:22:54.19:1813,54,0	1/1:7,15:24:42.14:1542,42,0	1/1:6,13:19:42.14:1376,42,0	0/0:20,0:20:54.18:0,54,1410	0/0:27,0:27:69.24:0,69,1832	1/1:8,16:24:60.21:2416,60,0	1/1:14,18:33:88.49:3241,88,0	1/1:6,26:31:84.29:3222,84,0	./.
chr10	64815552	.	CGTGTGTGTGTGT	C	1446.67	PASS	AB=1.000;AC=15;AF=0.278;AN=54;BaseQRankSum=2.414;DP=363;FS=6.278;HRun=0;HaplotypeScore=142.1284;InbreedingCoeff=-0.0077;MQ=50.96;MQ0=4;MQRankSum=-4.305;QD=10.41;ReadPosRankSum=-4.007;VQSLOD=0.8154;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:72.25:0,72,2849	0/1:4,0:4:39.53:40,0,129	0/0:22,0:13:36.12:0,36,1180	0/0:18,0:12:33.11:0,33,1377	1/1:0,8:8:3.01:70,3,0	1/1:8,0:8:3.01:75,3,0	0/0:22,0:22:11.78:0,12,163	0/0:19,0:19:39.08:0,39,1648	0/0:19,0:19:51.18:0,51,2680	0/0:3,4:7:3.01:0,3,73	./.	0/1:13,0:13:63.82:64,0,575	0/0:9,0:10:27.09:0,27,1462	0/0:5,0:5:6.02:0,6,203	0/1:9,0:9:62.90:63,0,286	0/0:5,0:5:9.03:0,9,183	0/1:38,0:38:99:240,0,1506	0/1:19,0:19:99:351,0,338	1/1:1,5:6:12.99:264,13,0	0/0:2,0:2:3.01:0,3,100	0/0:11,0:11:5.74:0,6,142	0/0:7,0:7:3.01:0,3,117	0/0:21,0:21:51.18:0,51,2318	0/0:26,0:26:72.23:0,72,3369	0/1:10,0:10:35.73:36,0,459	0/1:3,0:3:22.55:33,0,23	0/1:14,0:14:99:184,0,187	0/1:7,0:7:99:183,0,232
chr10	64818619	.	A	AAAAC	281.79	PASS	AC=2;AF=0.037;AN=54;BaseQRankSum=2.336;DP=312;FS=5.657;HRun=0;HaplotypeScore=52.6832;InbreedingCoeff=0.5807;MQ=55.73;MQ0=7;MQRankSum=0.545;QD=31.31;ReadPosRankSum=0.247;VQSLOD=2.3959;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:51.17:0,51,820	./.	0/0:12,0:7:8.19:0,8,179	0/0:6,0:6:15.05:0,15,239	1/1:0,9:9:17.99:372,18,0	0/0:13,0:13:27.08:0,27,398	0/0:8,0:8:12.04:0,12,197	0/0:22,0:22:42.07:0,42,548	0/0:13,0:13:36.11:0,36,569	0/0:15,0:15:33.09:0,33,459	0/0:14,0:14:24.05:0,24,336	0/0:4,0:4:6.01:0,6,76	0/0:9,0:9:21.07:0,21,345	0/0:10,0:10:27.09:0,27,443	0/0:7,0:7:9.03:0,9,148	0/0:7,0:7:21.07:0,21,345	0/0:18,0:18:42.07:0,42,612	0/0:13,0:12:27.09:0,27,444	0/0:17,0:9:21.06:0,21,322	0/0:4,0:4:6.01:0,6,74	0/0:8,0:8:15.04:0,15,224	0/0:1,0:1:3.01:0,3,49	0/0:8,0:8:21.02:0,21,293	0/0:3,0:3:9.03:0,9,132	0/0:10,0:9:18.06:0,18,296	0/0:16,0:16:42.14:0,42,690	0/0:23,0:21:63.18:0,63,983	0/0:18,0:17:45.07:0,45,707
chr10	64818688	.	CTT	C	1543.93	PASS	AB=0.676;AC=34;AF=0.607;AN=56;BaseQRankSum=-1.565;DP=292;FS=3.911;HRun=16;HaplotypeScore=39.6605;InbreedingCoeff=0.5330;MQ=70.15;MQ0=6;MQRankSum=1.166;QD=7.84;ReadPosRankSum=5.224;VQSLOD=-0.4407;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,11:19:8.50:103,9,0	1/1:1,1:2:3:25,3,0	0/0:28,0:12:1.25:0,1,4	0/0:26,0:15:8.79:0,9,46	0/0:1,0:2:0.47:0,0,1	1/1:7,3:11:14.80:122,15,0	1/1:3,5:9:4.86:78,5,0	1/1:9,10:20:23.20:168,23,0	0/0:15,0:15:33.05:0,33,373	1/1:10,0:10:2.80:25,3,0	0/0:1,2:3:0:0,0,0	1/1:1,0:1:2.97:20,3,0	0/0:6,0:7:17.40:0,17,168	0/1:2,4:7:0.07:42,0,0	1/1:4,4:9:8.69:62,9,0	1/1:5,6:12:17.55:137,18,0	1/1:4,11:16:26.60:212,27,0	1/1:3,2:6:2.11:61,2,0	1/1:9,9:17:26.76:216,27,0	0/0:1,0:1:0:0,0,0	1/1:2,10:13:20.68:162,21,0	0/0:1,0:1:0:0,0,0	0/0:1,0:2:5.38:0,5,48	0/0:8,0:9:20.42:0,20,154	1/1:6,6:12:14.83:125,15,0	0/1:7,3:10:17.88:19,0,18	1/1:10,2:12:5.79:50,6,0	1/1:6,3:8:8.81:75,9,0
chr10	64818878	.	AC	A	117.83	PASS	AC=2;AF=0.038;AN=52;BaseQRankSum=3.165;DP=201;FS=3.557;HRun=1;HaplotypeScore=22.0924;InbreedingCoeff=0.4890;MQ=60.91;MQ0=11;MQRankSum=-1.483;QD=23.57;ReadPosRankSum=2.438;VQSLOD=3.6856;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:10:21.02:0,21,301	./.	0/0:8,1:8:18.06:0,18,284	0/0:5,0:2:2.96:0,3,33	1/1:0,5:5:15.05:205,15,0	0/0:7,0:6:15.05:0,15,236	0/0:9,0:6:15.05:0,15,237	0/0:21,0:17:51.05:0,51,671	0/0:10,0:10:27.06:0,27,383	0/0:9,0:9:27.09:0,27,428	0/0:10,0:10:30.10:0,30,471	0/0:3,0:3:6.02:0,6,94	0/0:4,0:4:12.03:0,12,167	0/0:2,0:2:6.02:0,6,94	0/0:3,0:3:9.03:0,9,141	0/0:8,0:7:21.06:0,21,311	0/0:9,0:9:24:0,24,349	0/0:11,0:11:32.94:0,33,487	0/0:9,0:9:27.04:0,27,400	0/0:4,0:4:11.93:0,12,132	0/0:6,0:4:9.03:0,9,141	./.	0/0:1,0:1:3.01:0,3,48	0/0:6,0:4:6.02:0,6,93	0/0:11,0:11:27.09:0,27,428	0/0:10,0:9:27.09:0,27,428	0/0:8,0:8:24.08:0,24,373	0/0:10,0:10:30.10:0,30,475
chr10	64818931	.	CT	C	141.38	PASS	AC=4;AF=0.091;AN=44;BaseQRankSum=2.216;DP=164;FS=0.000;HRun=3;HaplotypeScore=14.9669;InbreedingCoeff=0.3673;MQ=35.54;MQ0=71;MQRankSum=-2.345;QD=5.44;ReadPosRankSum=-1.248;VQSLOD=-0.1374;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,3:4:6.02:74,6,0	./.	./.	./.	0/0:9,0:6:9.01:0,9,107	0/0:4,0:1:3.01:0,3,43	./.	1/1:8,5:6:15.01:169,15,0	0/0:7,0:3:9.03:0,9,126	0/0:4,0:3:9.03:0,9,115	0/0:7,0:7:21.03:0,21,248	0/0:4,0:2:6.02:0,6,86	0/0:4,0:2:3.01:0,3,43	0/0:3,0:2:6.02:0,6,86	0/0:4,0:1:3:0,3,25	0/0:5,0:4:9.03:0,9,130	0/0:6,0:2:3.01:0,3,43	0/0:7,0:7:21.06:0,21,284	0/0:4,0:1:3.01:0,3,43	./.	0/0:9,0:2:3.01:0,3,43	0/0:3,0:1:3.01:0,3,43	./.	0/0:13,0:3:3.01:0,3,43	0/0:8,0:6:12.04:0,12,173	0/0:8,0:5:15.05:0,15,216	0/0:11,0:6:18.04:0,18,239	0/0:9,0:7:12.04:0,12,173
chr10	64818954	.	T	TCCCCCTC	645.10	PASS	AC=14;AF=1.000;AN=14;DP=124;FS=0.000;HRun=0;HaplotypeScore=14.6336;MQ=26.81;MQ0=76;QD=16.13;VQSLOD=1.2739;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	1/1:5,0:2:3.01:107,3,0	./.	./.	./.	./.	./.	1/1:0,2:2:3.01:112,3,0	./.	./.	./.	./.	1/1:3,1:2:3.01:112,3,0	./.	./.	./.	./.	./.	1/1:1,1:1:3.01:112,3,0	./.	./.	1/1:8,1:4:3.01:112,3,0	./.	1/1:11,0:4:3.01:46,3,0	1/1:5,1:4:3.01:112,3,0
chr10	64821738	.	TTG	T	3046.62	PASS	AB=0.985;AC=24;AF=0.429;AN=56;BaseQRankSum=-2.206;DP=559;FS=22.419;HRun=0;HaplotypeScore=116.8718;InbreedingCoeff=-0.1868;MQ=48.63;MQ0=8;MQRankSum=-1.029;QD=7.52;ReadPosRankSum=-8.576;VQSLOD=-0.7467;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:6.69:0,7,96	0/0:8,0:8:6.24:0,6,34	0/0:13,0:4:5.83:0,6,41	0/1:17,0:7:7.87:8,0,53	0/0:31,0:30:51.29:0,51,502	1/1:15,1:16:2.48:147,2,0	0/1:17,0:17:36.61:107,0,37	1/1:29,0:28:63.49:545,63,0	0/0:22,0:22:62.80:0,63,753	0/1:20,0:20:16.55:197,0,17	0/1:18,0:18:49.85:122,0,50	0/1:14,0:14:36.22:60,0,36	0/0:24,0:23:54.30:0,54,701	0/1:16,1:17:2.77:130,0,3	0/1:14,0:14:25.55:133,0,26	0/1:20,1:20:53.21:116,0,53	0/1:29,2:30:73.02:180,0,73	0/1:17,0:14:25.41:40,0,25	0/1:34,0:32:6.48:257,0,6	0/1:21,0:21:45.21:96,0,45	1/1:12,0:11:18.25:187,18,0	1/1:15,0:14:8.55:144,9,0	0/0:18,0:18:44.22:0,44,551	0/0:19,0:19:47.71:0,48,606	0/1:21,1:21:31.77:168,0,32	0/1:27,1:28:83.09:203,0,83	0/1:31,0:29:19.42:336,0,19	0/1:11,0:11:21.68:42,0,22
chr10	64821739	.	TG	T	5964.28	PASS	AB=1.000;AC=43;AF=0.768;AN=56;BaseQRankSum=1.756;DP=550;FS=6.901;HRun=1;HaplotypeScore=98.7638;InbreedingCoeff=0.6343;MQ=47.43;MQ0=8;MQRankSum=-2.506;QD=13.05;ReadPosRankSum=-4.403;VQSLOD=1.9134;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:18,0:18:19.12:19,0,66	1/1:4,4:8:1.29:23,1,0	0/0:11,0:2:3.47:0,3,28	0/1:17,0:7:6.30:6,0,45	0/1:32,0:31:34.06:34,0,274	1/1:15,1:16:37.23:282,37,0	1/1:14,2:16:32.64:262,33,0	1/1:29,0:28:51.84:465,52,0	0/0:22,0:22:58.21:0,58,558	1/1:18,1:19:43.90:336,44,0	1/1:18,0:18:33.28:232,33,0	1/1:12,2:14:22.64:182,23,0	0/0:24,0:23:36.02:0,36,491	1/1:16,1:17:43.61:338,44,0	1/1:11,3:14:26.82:230,27,0	1/1:20,0:19:6.26:259,6,0	1/1:30,0:29:41.16:335,41,0	1/1:17,0:14:24.16:173,24,0	1/1:31,2:31:68.51:516,69,0	1/1:19,2:21:30.78:257,31,0	1/1:11,1:11:28.06:243,28,0	1/1:14,1:14:34.22:267,34,0	0/0:18,0:18:44.05:0,44,407	0/0:18,0:18:43.37:0,43,451	1/1:20,2:21:42.30:401,42,0	1/1:24,3:27:50.05:416,50,0	1/1:30,1:29:66.19:567,66,0	1/1:10,1:11:18.14:123,18,0
chr10	64821740	.	G	GTTTTTGTTGTT	625.58	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=0.235;DP=563;FS=6.332;HRun=0;HaplotypeScore=228.4135;InbreedingCoeff=0.3564;MQ=47.42;MQ0=9;MQRankSum=-0.612;QD=6.95;ReadPosRankSum=-5.338;VQSLOD=0.5131;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,13:28:15:470,15,0	0/0:8,0:8:10.82:0,11,161	0/0:9,0:2:3.01:0,3,47	0/0:15,0:6:10.09:0,10,99	0/1:32,0:31:1.93:226,0,2	0/0:17,0:17:38.67:0,39,576	0/1:16,0:16:21.89:22,0,488	0/0:29,0:29:5.36:0,5,313	0/0:19,0:22:63.16:0,63,1420	0/0:21,0:21:51.65:0,52,586	0/0:17,0:17:39.34:0,39,587	0/0:13,0:13:13.35:0,13,245	0/0:21,0:23:54.17:0,54,1308	0/0:16,0:16:31.87:0,32,352	0/0:14,0:14:27.57:0,28,507	0/0:20,0:19:47:0,47,445	0/0:31,0:30:57.12:0,57,660	0/0:17,0:14:26.02:0,26,318	0/0:34,0:31:9.08:0,9,626	0/0:22,0:22:39.59:0,40,565	0/0:12,0:11:10.95:0,11,261	0/1:14,0:13:27.60:28,0,215	0/0:16,0:18:40.19:0,40,889	0/0:17,0:19:48.10:0,48,1248	0/0:22,0:21:50.89:0,51,617	0/0:29,0:29:16.66:0,17,761	0/0:30,0:28:40.42:0,40,611	0/0:11,0:11:21.88:0,22,318
chr10	64821746	.	T	TG	336.78	PASS	AB=0.723;AC=1;AF=0.018;AN=56;BaseQRankSum=4.307;DP=562;FS=4.375;HRun=0;HaplotypeScore=117.5247;InbreedingCoeff=0.0829;MQ=46.16;MQ0=8;MQRankSum=-5.560;QD=9.91;ReadPosRankSum=1.659;VQSLOD=3.6976;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:14.34:0,14,82	0/0:9,0:9:13.77:0,14,114	0/0:8,0:1:2.37:0,2,8	0/0:14,0:4:11.93:0,12,105	0/1:21,12:33:70.97:411,0,71	0/0:16,0:16:41.10:0,41,394	0/0:16,0:16:34.50:0,34,390	0/0:28,0:27:45.14:0,45,385	0/0:23,0:23:61.84:0,62,801	0/0:22,0:22:57.86:0,58,508	0/0:15,0:15:41.98:0,42,442	0/0:13,0:13:28.57:0,29,273	0/0:21,0:20:33.95:0,34,625	0/0:18,0:18:50.35:0,50,450	0/0:16,0:16:44.70:0,45,384	0/0:20,0:19:44.95:0,45,452	0/0:30,0:29:58.12:0,58,607	0/0:18,0:15:38.82:0,39,339	0/0:36,0:33:71.27:0,71,650	0/0:23,0:23:39.92:0,40,431	0/0:12,0:11:26.26:0,26,227	0/0:14,0:13:14.82:0,15,214	0/0:16,0:16:35.78:0,36,405	0/0:22,0:22:50.24:0,50,618	0/0:24,0:23:55.60:0,56,546	0/0:30,0:30:74.20:0,74,794	0/0:26,0:24:73.86:0,74,653	0/0:13,0:13:35.94:0,36,334
chr10	64821757	.	C	CTT	809.27	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.372;DP=545;FS=17.512;HRun=8;HaplotypeScore=119.1764;InbreedingCoeff=0.8215;MQ=48.82;MQ0=7;MQRankSum=-5.493;QD=24.52;ReadPosRankSum=-0.478;VQSLOD=1.4639;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:20.53:0,21,233	0/0:11,0:11:14.35:0,14,163	0/0:12,0:4:8.98:0,9,87	0/0:11,0:4:6:0,6,58	1/1:15,18:33:65.92:904,66,0	0/0:17,0:17:36.06:0,36,391	0/0:17,0:17:29.57:0,30,333	0/0:29,0:29:71.83:0,72,735	0/0:22,0:22:48.04:0,48,528	0/0:20,0:20:47.97:0,48,516	0/0:14,0:14:23.85:0,24,266	0/0:17,0:17:24.01:0,24,258	0/0:19,0:18:32.54:0,33,340	0/0:15,0:16:23.14:0,23,245	0/0:19,0:19:29.80:0,30,329	0/0:21,0:20:32.96:0,33,368	0/0:26,0:26:41.30:0,41,445	0/0:16,0:14:26.65:0,27,296	0/0:28,0:25:38.07:0,38,428	0/0:18,0:18:19.22:0,19,225	0/0:11,0:11:17.52:0,18,190	0/0:19,0:18:37.59:0,38,452	0/0:16,0:16:38.86:0,39,431	0/0:24,0:24:25.83:0,26,475	0/0:20,0:19:27.01:0,27,298	0/0:27,0:27:47.94:0,48,534	0/0:24,0:24:37.68:0,38,402	0/0:13,0:13:26.97:0,27,274
chr10	64825615	.	GGT	G	741.59	PASS	AB=0.917;AC=3;AF=0.054;AN=56;BaseQRankSum=7.304;DP=846;FS=17.860;HRun=0;HaplotypeScore=104.4048;InbreedingCoeff=0.6837;MQ=66.92;MQ0=0;MQRankSum=-1.822;QD=19.02;ReadPosRankSum=0.268;VQSLOD=2.4821;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,1:38:52.44:0,52,1395	0/1:10,1:11:7.76:8,0,419	0/0:37,0:37:43.99:0,44,1063	0/0:31,0:31:67.07:0,67,1065	1/1:2,26:28:69.14:835,69,0	0/0:25,0:25:69.24:0,69,1147	0/0:22,0:22:45.15:0,45,745	0/0:51,0:51:99:0,117,1915	0/0:33,0:33:87.26:0,87,1392	0/0:35,1:36:55.44:0,55,1432	0/0:27,0:27:69.24:0,69,1132	0/0:28,1:29:34.37:0,34,1096	0/0:45,0:45:99:0,120,1967	0/0:31,0:31:75.26:0,75,1234	0/0:45,1:46:94.58:0,95,2106	0/0:44,0:43:99:0,120,1988	0/0:16,0:16:36.10:0,36,570	0/0:19,0:19:45.15:0,45,747	0/0:15,0:15:36.11:0,36,568	0/0:30,1:31:49.43:0,49,1346	0/0:54,0:54:99:0,141,2326	0/0:20,0:20:57.19:0,57,945	0/0:21,0:21:60.19:0,60,961	0/0:25,0:24:63.22:0,63,1047	0/0:19,0:19:54.18:0,54,892	0/0:33,0:33:90.30:0,90,1470	0/0:40,1:41:70.54:0,71,1669	0/0:18,0:18:54.09:0,54,789
chr10	64826465	.	CTGTGTG	C	2342.46	PASS	AB=0.817;AC=31;AF=0.674;AN=46;BaseQRankSum=3.515;DP=487;FS=15.489;HRun=0;HaplotypeScore=115.3131;InbreedingCoeff=0.4195;MQ=65.38;MQ0=7;MQRankSum=-4.850;QD=8.64;ReadPosRankSum=1.021;VQSLOD=1.7013;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:25:6.02:84,6,0	./.	./.	./.	0/0:12,0:17:8.99:0,9,75	1/1:14,2:16:6.02:121,6,0	0/0:7,2:9:3.01:0,3,80	./.	0/0:10,0:10:24.08:0,24,644	1/1:14,0:15:1.74:40,2,0	1/1:21,2:23:9.03:145,9,0	1/1:6,5:12:12.04:242,12,0	0/0:19,0:21:21.07:0,21,540	1/1:9,0:15:15.05:209,15,0	1/1:6,6:12:9.03:182,9,0	0/1:15,7:22:75.04:244,0,75	0/1:18,1:21:80.54:214,0,81	0/1:7,1:9:7.88:93,0,8	1/1:12,2:14:3.01:61,3,0	1/1:13,4:17:5.20:120,5,0	./.	1/1:9,1:14:2.61:60,3,0	0/0:15,0:14:6.02:0,6,162	0/0:13,0:18:30.10:0,30,790	1/1:12,3:17:8.95:144,9,0	1/1:11,8:19:21.05:360,21,0	1/1:13,2:15:6.02:121,6,0	1/1:1,3:4:3.01:61,3,0
chr10	64826548	.	C	CT	540.57	PASS	AB=0.941;AC=13;AF=0.232;AN=56;BaseQRankSum=0.370;DP=470;FS=0.000;HRun=14;HaplotypeScore=75.8031;InbreedingCoeff=0.2763;MQ=72.38;MQ0=5;MQRankSum=-0.992;QD=3.11;ReadPosRankSum=0.475;VQSLOD=-0.0438;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,24:33:62.67:529,63,0	0/1:4,1:5:13.27:21,0,13	0/0:36,0:22:12.30:0,12,76	0/1:30,0:16:0.90:1,0,14	1/1:15,0:13:1.02:28,1,0	0/0:14,0:14:6.11:0,6,137	0/1:9,0:9:1.91:2,0,77	1/1:13,1:18:8.93:68,9,0	0/0:8,0:9:13.78:0,14,82	0/0:14,0:14:20.58:0,21,133	0/0:11,0:13:15.80:0,16,87	0/0:11,0:12:25.61:0,26,159	0/0:18,0:18:12.40:0,12,186	0/0:14,0:15:12.03:0,12,79	0/0:20,0:21:37.41:0,37,236	0/0:10,0:11:22.68:0,23,140	0/0:23,1:24:22.56:0,23,276	0/0:18,0:17:17.80:0,18,177	0/0:12,0:12:17.61:0,18,113	0/0:8,1:10:15.79:0,16,95	0/1:13,1:15:6.69:7,0,82	0/1:17,1:19:11.10:11,0,176	0/1:10,1:11:5.67:6,0,94	0/0:29,1:31:25.24:0,25,279	0/1:17,1:19:14.89:15,0,107	0/0:17,0:17:26.41:0,26,172	0/0:15,0:15:20.54:0,21,130	0/0:5,0:5:14.78:0,15,96
chr10	64826863	.	G	GGA	1330.94	PASS	AB=1.000;AC=13;AF=0.250;AN=52;BaseQRankSum=0.934;DP=506;FS=16.095;HRun=0;HaplotypeScore=102.3758;InbreedingCoeff=0.1863;MQ=61.37;MQ0=13;MQRankSum=-0.414;QD=7.97;ReadPosRankSum=1.783;VQSLOD=1.9195;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:13,23:36:33.06:499,33,0	0/0:5,0:5:1.47:0,1,23	0/0:43,0:16:30.09:0,30,365	0/0:65,0:29:23.68:0,24,244	./.	0/1:13,0:13:12.01:12,0,75	0/1:16,0:16:32.36:32,0,75	1/1:3,28:31:72.81:834,73,0	0/0:29,0:29:72.17:0,72,846	0/0:9,0:9:17.91:0,18,143	0/0:12,0:12:3.21:0,3,20	0/0:12,0:12:3.75:0,4,132	0/0:26,0:25:65.83:0,66,747	0/0:15,0:15:16.99:0,17,126	0/1:14,0:13:4.52:5,0,66	0/1:20,0:20:44.63:45,0,77	0/0:19,0:18:10.02:0,10,118	1/1:6,0:5:4.50:22,4,0	0/1:7,0:6:16.62:17,0,35	0/1:10,0:10:8.22:8,0,54	0/0:24,0:23:12.11:0,12,196	0/1:12,0:12:10.88:11,0,23	0/0:8,0:8:21.05:0,21,246	0/0:20,0:20:50.75:0,51,572	0/0:6,0:6:9.01:0,9,91	0/0:17,0:16:22.64:0,23,154	0/0:17,0:17:7.14:0,7,165	./.
chr10	64827140	.	C	CTT	752.29	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=0.135;DP=722;FS=3.236;HRun=2;HaplotypeScore=116.7120;InbreedingCoeff=0.9901;MQ=86.47;MQ0=0;MQRankSum=-0.217;QD=37.61;ReadPosRankSum=-0.095;VQSLOD=3.6524;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,105,1523	0/0:6,0:6:18.06:0,18,265	0/0:28,0:28:76.51:0,77,1035	0/0:26,0:26:59.87:0,60,781	1/1:0,20:20:51.05:847,51,0	0/0:26,0:26:63.21:0,63,927	0/0:22,0:22:60.19:0,60,864	0/0:33,0:33:78.25:0,78,1131	0/0:26,0:26:75.25:0,75,1103	0/0:25,0:25:72.22:0,72,1038	0/0:23,0:23:66.22:0,66,971	0/0:24,0:24:72.24:0,72,1059	0/0:18,0:18:51.17:0,51,750	0/0:28,0:28:78.25:0,78,1129	0/0:30,0:30:87.26:0,87,1242	0/0:28,0:28:81.27:0,81,1192	0/0:23,0:23:66.21:0,66,953	0/0:21,0:21:60.17:0,60,860	0/0:25,0:25:72.24:0,72,1057	0/0:33,0:33:93.29:0,93,1347	0/0:39,0:39:99:0,111,1595	0/0:29,0:29:84.27:0,84,1219	0/0:18,0:18:51.15:0,51,730	0/0:27,0:27:78.26:0,78,1149	0/0:20,0:20:57.19:0,57,839	0/0:45,0:45:99:0,135,1951	0/0:34,0:34:93.31:0,93,1369	0/0:10,0:10:24.08:0,24,353
chr10	64829134	.	AT	A	11746.94	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=6.000;DP=577;FS=9.579;HRun=9;HaplotypeScore=58.2873;InbreedingCoeff=0.9945;MQ=74.17;MQ0=0;MQRankSum=-3.926;QD=23.83;ReadPosRankSum=1.647;VQSLOD=5.4902;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,29:29:87.05:796,87,0	1/1:1,10:11:30.02:274,30,0	0/0:18,0:18:30.03:0,30,317	0/0:8,0:8:15.04:0,15,166	1/1:3,41:44:99:1125,123,0	1/1:1,19:20:54.03:494,54,0	1/1:3,10:13:30.01:275,30,0	1/1:6,21:27:63.01:572,63,0	0/0:17,0:17:48.13:0,48,544	1/1:5,28:33:84.04:768,84,0	1/1:1,22:23:57.02:522,57,0	1/1:1,9:10:27.01:247,27,0	0/0:19,0:19:45.13:0,45,519	1/1:4,15:20:48.02:439,48,0	1/1:1,17:18:44.92:412,45,0	1/1:3,20:23:51.02:467,51,0	1/1:1,11:12:33.02:302,33,0	1/1:2,14:16:42.02:384,42,0	1/1:3,22:25:66.03:604,66,0	1/1:0,27:27:75.04:687,75,0	1/1:1,9:10:24.01:220,24,0	1/1:0,28:28:81.04:741,81,0	0/0:13,0:13:36.10:0,36,409	0/0:9,0:9:21.06:0,21,242	1/1:1,23:24:63.03:577,63,0	1/1:3,26:29:78.04:714,78,0	1/1:1,37:38:99:906,99,0	1/1:4,9:13:24.01:220,24,0
chr10	64830447	.	G	GCAGAATC	20930.10	PASS	AB=0.940;AC=37;AF=0.661;AN=56;BaseQRankSum=14.672;DP=565;FS=0.995;HRun=0;HaplotypeScore=205.1860;InbreedingCoeff=0.7909;MQ=90.11;MQ0=1;MQRankSum=-18.742;QD=66.23;ReadPosRankSum=3.689;VQSLOD=4.9536;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:61,0:61:99:0,184,4690	1/1:6,1:7:21.07:581,21,0	0/0:33,0:33:93.29:0,93,2236	0/0:24,0:24:40.92:0,41,1558	0/0:35,0:35:99:0,99,2579	1/1:14,4:18:49.05:1397,49,0	1/1:19,0:19:53.06:1351,53,0	0/0:29,0:29:84.28:0,84,2154	0/0:24,0:24:69.22:0,69,1799	1/1:12,2:14:39.06:849,39,0	1/1:13,4:17:48.15:1136,48,0	1/1:16,3:20:57.20:1525,57,0	0/0:20,0:20:57.18:0,57,1458	1/1:8,5:13:36.11:992,36,0	1/1:18,12:30:90.30:2521,90,0	1/1:10,6:16:45.15:1332,45,0	1/1:14,0:13:33.11:802,33,0	1/1:3,1:4:9.03:244,9,0	1/1:10,0:10:30.08:700,30,0	1/1:15,5:20:48.35:1276,48,0	0/1:11,0:11:0.02:502,0,0	1/1:18,4:22:63.22:1411,63,0	0/0:23,0:23:69.22:0,69,1769	0/1:24,1:25:40.73:41,0,1677	1/1:5,4:8:24.08:685,24,0	1/1:15,4:19:57.20:1600,57,0	1/1:18,4:22:60.21:1562,60,0	0/1:5,1:6:15.22:424,0,15
chr10	64830448	.	CCTT	C	6327.38	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=18.080;DP=534;FS=0.314;HRun=0;HaplotypeScore=194.9867;InbreedingCoeff=0.9740;MQ=92.95;MQ0=1;MQRankSum=-17.442;QD=24.34;ReadPosRankSum=4.977;VQSLOD=4.2757;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:61,0:61:99:0,184,4457	1/1:2,5:7:20.42:219,20,0	0/0:34,0:34:99:0,99,2356	0/0:24,0:24:68.90:0,69,1582	0/0:35,0:35:99:0,102,2446	1/1:6,12:18:50.41:449,50,0	1/1:1,14:15:44.70:438,45,0	0/0:30,0:30:90.31:0,90,2186	0/0:23,0:23:69.24:0,69,1703	1/1:2,10:12:35.19:362,35,0	1/1:5,11:16:43.38:399,43,0	1/1:4,15:19:53.19:474,53,0	0/0:20,0:20:60.21:0,60,1457	1/1:8,4:12:28.22:194,28,0	1/1:14,15:29:76.07:607,76,0	1/1:7,9:16:40.15:305,40,0	1/1:1,10:10:27.06:294,27,0	1/1:1,3:4:8.39:85,8,0	1/1:1,5:6:18.04:223,18,0	1/1:8,12:20:51.88:403,52,0	1/1:1,7:8:20.77:190,21,0	1/1:4,16:20:53.54:505,54,0	0/0:24,0:24:72.25:0,72,1755	0/0:23,0:23:62.39:0,62,1621	1/1:5,4:8:20.70:132,21,0	1/1:7,9:16:45.97:488,46,0	1/1:4,13:17:43.78:451,44,0	1/1:2,3:5:7.56:108,8,0
chr10	64830450	.	T	TCTG	2560.26	PASS	AB=0.795;AC=15;AF=0.268;AN=56;BaseQRankSum=12.938;DP=543;FS=2.217;HRun=0;HaplotypeScore=207.7775;InbreedingCoeff=-0.3677;MQ=91.91;MQ0=1;MQRankSum=-9.555;QD=11.33;ReadPosRankSum=6.399;VQSLOD=3.2856;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:60,0:60:99:0,181,3284	0/1:7,1:8:35.44:35,0,82	0/0:33,0:33:99:0,99,1735	0/0:24,0:24:63.60:0,64,1186	0/0:34,0:34:99:0,99,1819	0/1:13,4:17:99:168,0,187	0/0:15,0:15:33.95:0,34,262	0/0:31,0:31:90.29:0,90,1599	0/0:24,0:24:69.23:0,69,1257	0/1:12,2:14:81.87:82,0,136	0/1:11,4:15:89.17:175,0,89	0/1:18,4:22:99:154,0,245	0/0:20,0:20:60.20:0,60,1097	0/1:5,5:10:54.38:229,0,54	0/1:17,12:29:99:563,0,126	0/1:10,6:16:99:272,0,137	0/0:11,0:10:19.70:0,20,117	0/1:3,1:4:32.73:45,0,33	0/0:7,0:7:14.70:0,15,96	0/1:15,5:20:99:231,0,122	0/0:7,0:7:20.79:0,21,140	0/1:17,4:21:76.45:182,0,76	0/0:24,0:24:72.25:0,72,1327	0/0:26,1:27:20.77:0,21,1206	0/1:6,4:9:37.53:191,0,38	0/1:12,4:16:99:185,0,151	0/1:15,4:19:99:167,0,149	0/1:4,1:5:39.22:39,0,64
chr10	64830452	.	A	AG	10286.17	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=21.384;DP=774;FS=0.000;HRun=0;HaplotypeScore=384.4071;InbreedingCoeff=0.9967;MQ=78.62;MQ0=1;MQRankSum=-21.158;QD=20.53;ReadPosRankSum=3.359;VQSLOD=2.9686;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:58:99:0,175,2431	1/1:6,5:12:35.79:303,36,0	0/0:32,0:32:96.32:0,96,1331	0/0:25,0:25:68.02:0,68,891	0/0:34,0:34:99:0,99,1335	1/1:13,12:29:78.42:558,78,0	1/1:15,15:30:78.02:602,78,0	0/0:29,0:29:87.29:0,87,1203	0/0:24,0:24:72.23:0,72,990	1/1:20,8:30:86.60:796,87,0	1/1:15,11:30:69.07:499,69,0	1/1:17,15:36:98.95:838,99,0	0/0:20,0:20:60.18:0,60,821	1/1:17,4:26:74.53:568,75,0	1/1:17,15:44:99:846,112,0	1/1:12,9:27:72.98:534,73,0	1/1:6,10:15:37.17:325,37,0	1/1:3,3:7:14.01:116,14,0	1/1:11,5:16:44.55:417,45,0	1/1:20,12:37:89.29:661,89,0	1/1:6,7:13:29.78:215,30,0	1/1:21,16:41:86.35:580,86,0	0/0:24,0:24:72.24:0,72,1006	0/0:26,0:27:62.02:0,62,1052	1/1:13,5:21:47.54:348,48,0	1/1:19,9:32:95.64:873,96,0	1/1:25,13:42:99:948,114,0	1/1:6,3:11:32.73:261,33,0
chr10	64830630	.	GA	G	484.10	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.264;DP=637;FS=1.502;HRun=10;HaplotypeScore=69.3489;InbreedingCoeff=0.8616;MQ=74.59;MQ0=0;MQRankSum=1.388;QD=21.05;ReadPosRankSum=0.609;VQSLOD=4.6064;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:33:87.04:0,87,931	0/0:12,0:12:36.10:0,36,398	0/0:20,0:20:21.05:0,21,364	0/0:13,0:14:5.99:0,6,92	1/1:0,22:23:68.02:579,68,0	0/0:23,0:23:60.12:0,60,650	0/0:18,0:18:45.12:0,45,498	0/0:31,0:33:72.32:0,72,752	0/0:19,0:19:48.12:0,48,523	0/0:32,2:34:26.34:0,26,745	0/0:15,0:15:45.07:0,45,477	0/0:21,1:24:36.87:0,37,587	0/0:23,0:23:69.15:0,69,739	0/0:23,0:23:63.17:0,63,697	0/0:29,1:30:43.12:0,43,697	0/0:27,0:27:69.17:0,69,748	0/0:24,0:24:66.16:0,66,718	0/0:15,0:15:33.09:0,33,365	0/0:16,0:16:39.08:0,39,417	0/0:29,0:29:69.12:0,69,736	0/0:17,0:17:48.10:0,48,509	0/0:13,1:15:9.86:0,10,311	0/0:27,0:27:64.56:0,65,700	0/0:19,0:19:54.13:0,54,588	0/0:21,0:21:60.15:0,60,657	0/0:27,0:27:72.19:0,72,789	0/0:36,0:35:96.23:0,96,1041	0/0:20,0:20:48.09:0,48,516
chr10	64831606	.	C	CT	1911.83	PASS	AB=0.968;AC=40;AF=0.714;AN=56;BaseQRankSum=6.856;DP=562;FS=1.201;HRun=15;HaplotypeScore=94.6657;InbreedingCoeff=0.4632;MQ=68.14;MQ0=0;MQRankSum=-0.063;QD=4.12;ReadPosRankSum=-3.943;VQSLOD=0.4996;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,3:24:5.94:0,6,142	1/1:12,0:12:14.45:78,14,0	0/0:23,0:10:5.02:0,5,23	0/1:10,0:8:7.12:29,0,7	0/1:18,4:22:27.13:27,0,84	1/1:22,0:22:16.85:90,17,0	1/1:10,0:10:8.12:35,8,0	0/1:23,1:25:22.89:23,0,101	0/1:13,0:17:0.15:0,0,70	1/1:34,0:34:60.03:303,60,0	1/1:21,0:21:29.15:138,29,0	1/1:19,0:19:8.32:42,8,0	0/0:12,0:14:21.25:0,21,111	1/1:15,0:16:4.09:17,4,0	1/1:21,0:21:11.36:57,11,0	0/1:19,0:19:3.57:45,0,4	0/1:21,0:21:2.48:42,0,2	1/1:14,0:14:14.90:69,15,0	1/1:21,0:21:31.54:161,32,0	1/1:35,0:35:48.04:234,48,0	1/1:20,0:20:27.21:134,27,0	1/1:19,0:20:20.21:105,20,0	0/0:21,3:24:13.71:0,14,203	0/0:13,0:13:23.33:0,23,141	1/1:24,0:25:21.33:110,21,0	1/1:31,0:31:49.09:265,49,0	1/1:20,0:20:4.28:20,4,0	1/1:9,0:9:13.88:64,14,0
chr10	64831621	.	T	TTTTTC	7856	PASS	AB=0.505;AC=36;AF=0.643;AN=56;BaseQRankSum=-0.736;DP=554;FS=1.839;HRun=0;HaplotypeScore=106.1352;InbreedingCoeff=0.7661;MQ=71.65;MQ0=1;MQRankSum=2.268;QD=21.01;ReadPosRankSum=-1.993;VQSLOD=4.4417;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:56.59:0,57,728	1/1:0,0:10:17.89:227,18,0	0/0:29,0:15:8.47:0,8,174	0/0:12,0:11:26.66:0,27,244	0/0:18,0:19:41.37:0,41,485	1/1:1,0:21:13.49:238,13,0	1/1:0,0:10:9:121,9,0	0/0:23,0:23:42.88:0,43,521	0/0:17,0:17:22.05:0,22,524	1/1:0,0:28:78.08:1158,78,0	1/1:0,0:23:53.78:694,54,0	1/1:0,0:14:9.03:181,9,0	0/0:13,0:13:36:0,36,431	1/1:2,0:19:3.01:60,3,0	1/1:1,0:26:11.92:119,12,0	0/1:1,0:24:38.72:163,0,39	0/1:0,0:20:19.33:163,0,19	1/1:7,0:9:18.03:259,18,0	1/1:0,0:22:60.85:764,61,0	1/1:1,1:30:74.46:987,74,0	1/1:15,0:18:45.62:600,46,0	1/1:1,1:17:38.91:542,39,0	0/0:28,0:28:80.81:0,81,1001	0/0:17,0:17:47.96:0,48,586	1/1:3,0:26:20.98:265,21,0	1/1:0,0:27:80.29:961,80,0	1/1:1,0:24:5.83:56,6,0	1/1:6,0:6:15.05:297,15,0
chr10	64832580	.	AT	A	684.27	PASS	AB=0.875;AC=4;AF=0.071;AN=56;BaseQRankSum=6.315;DP=601;FS=0.600;HRun=11;HaplotypeScore=62.9141;InbreedingCoeff=0.4477;MQ=75.19;MQ0=0;MQRankSum=-1.138;QD=10.69;ReadPosRankSum=0.083;VQSLOD=2.8433;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,36:38:92.89:764,93,0	0/0:9,0:10:23.93:0,24,239	0/1:20,0:15:23.44:23,0,159	0/0:15,0:14:9.30:0,9,100	0/0:26,0:29:69.27:0,69,685	0/0:22,0:22:66.16:0,66,701	0/0:19,2:22:10.69:0,11,509	0/0:14,0:34:81.52:0,82,467	0/0:20,0:20:51.11:0,51,535	0/0:22,0:22:48.07:0,48,493	0/0:15,0:16:44.95:0,45,461	0/0:14,1:16:20.30:0,20,406	0/0:22,0:22:48.12:0,48,508	0/0:18,1:19:29.49:0,29,518	0/0:23,0:24:66:0,66,686	0/0:19,0:22:57.03:0,57,582	0/0:31,1:32:50.54:0,51,743	0/0:17,0:18:44.95:0,45,462	0/0:14,0:15:41.94:0,42,430	0/0:23,0:23:66.16:0,66,700	0/0:26,0:28:80.83:0,81,809	0/0:20,0:21:53.96:0,54,550	0/0:21,1:22:35.49:0,35,575	0/0:13,0:15:38.93:0,39,398	0/0:17,1:18:26.47:0,26,475	0/0:31,0:31:81.20:0,81,857	0/0:21,0:21:54.13:0,54,568	0/1:4,2:6:9.61:10,0,113
chr10	64832738	.	A	AAC	2496.74	PASS	AB=0.809;AC=33;AF=0.589;AN=56;BaseQRankSum=-3.002;DP=546;FS=8.017;HRun=0;HaplotypeScore=104.2017;InbreedingCoeff=-0.0093;MQ=65.24;MQ0=9;MQRankSum=0.394;QD=5.49;ReadPosRankSum=-1.852;VQSLOD=1.8058;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:36,1:39:3.87:26,0,4	1/1:4,7:11:12.04:178,12,0	1/1:23,0:15:0.47:1,0,0	0/1:27,0:19:0:0,0,0	0/0:11,0:26:16.91:0,17,69	0/1:17,7:25:43.72:192,0,44	1/1:13,6:19:6.01:89,6,0	1/1:19,0:19:0.47:1,0,0	0/0:10,0:11:20.89:0,21,206	1/1:14,8:22:20:200,20,0	0/1:5,3:9:23.93:79,0,24	1/1:7,1:8:14.99:157,15,0	0/0:13,0:13:15.03:0,15,159	0/1:19,3:23:65.37:216,0,65	0/1:14,5:23:17.63:144,0,18	1/1:5,3:9:6.02:89,6,0	0/1:22,7:30:21.64:402,0,22	0/1:13,4:16:21.26:93,0,21	0/1:12,1:12:23.35:23,0,30	1/1:21,0:24:3:26,3,0	0/1:16,4:24:52.79:77,0,53	1/1:12,7:19:11.72:176,12,0	0/0:16,0:15:14.85:0,15,134	0/0:21,0:25:11.11:0,11,277	1/1:6,4:10:3.01:44,3,0	0/1:21,5:28:14.27:252,0,14	0/1:12,9:24:28.45:160,0,28	0/1:3,1:4:30.11:36,0,30
chr10	64835773	.	AACAC	A	1413.33	PASS	AB=0.864;AC=37;AF=0.740;AN=50;BaseQRankSum=3.497;DP=566;FS=9.894;HRun=0;HaplotypeScore=114.1076;InbreedingCoeff=0.1019;MQ=78.57;MQ0=19;MQRankSum=1.954;QD=3.61;ReadPosRankSum=1.783;VQSLOD=1.4333;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:35,1:38:0.82:12,1,0	1/1:4,2:6:5.95:64,6,0	./.	./.	0/0:19,0:19:9.03:0,9,154	1/1:19,0:19:0.79:44,1,0	1/1:18,6:23:2.98:46,3,0	0/0:24,0:23:20.86:0,21,166	1/1:7,0:7:6.01:91,6,0	0/1:17,0:17:8.97:9,0,24	0/1:16,1:17:27.18:136,0,27	1/1:12,1:14:1.12:108,1,0	0/1:6,8:14:27.63:184,0,28	1/1:8,0:8:0.89:2,1,0	1/1:13,0:13:3.01:44,3,0	1/1:8,0:8:5.98:50,6,0	0/1:18,13:31:21.22:169,0,21	0/1:27,6:33:3.77:84,0,4	./.	1/1:18,0:18:8.15:36,8,0	0/0:29,4:32:9.01:0,9,94	1/1:15,11:26:3.48:47,3,0	1/1:10,2:13:2.87:46,3,0	1/1:31,16:46:12.41:169,12,0	0/1:12,1:13:4.20:29,0,4	1/1:11,2:12:6.02:87,6,0	0/1:4,0:4:0.16:2,0,0	1/1:2,2:4:6.02:92,6,0
chr10	64837190	.	G	GTTGT	10366.87	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=10.664;DP=645;FS=0.418;HRun=0;HaplotypeScore=134.9227;InbreedingCoeff=0.9958;MQ=67.38;MQ0=1;MQRankSum=-0.337;QD=21.64;ReadPosRankSum=1.419;VQSLOD=4.4671;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:38:75.19:0,75,1142	1/1:13,0:13:30.05:290,30,0	0/0:29,0:23:27.09:0,27,414	0/0:23,0:21:32.68:0,33,434	1/1:9,20:31:60.68:1448,61,0	1/1:22,0:22:51.08:493,51,0	1/1:19,0:19:39.06:377,39,0	1/1:27,0:27:18.03:174,18,0	0/0:21,0:21:48.12:0,48,727	1/1:30,0:30:72.11:696,72,0	1/1:22,0:22:45.07:433,45,0	1/1:22,0:22:48.07:462,48,0	0/0:16,0:16:30.10:0,30,486	1/1:12,0:12:30.05:290,30,0	1/1:20,0:20:42.07:406,42,0	1/1:27,0:26:54.09:523,54,0	1/1:20,0:20:39.06:377,39,0	1/1:20,0:20:39.06:377,39,0	1/1:12,0:12:24.04:232,24,0	1/1:30,0:30:66.11:639,66,0	1/1:20,0:20:39.06:377,39,0	1/1:18,0:18:45.07:434,45,0	0/0:15,0:17:18.30:0,18,498	0/0:22,0:22:48.14:0,48,751	1/1:30,0:30:63.10:609,63,0	1/1:35,0:35:87.06:830,87,0	1/1:31,0:31:69.11:667,69,0	1/1:17,0:17:23.57:231,24,0
chr10	64837202	.	T	TTTG	22660.64	PASS	AB=1.000;AC=41;AF=0.732;AN=56;BaseQRankSum=-13.116;DP=688;FS=1.943;HRun=0;HaplotypeScore=85.9999;InbreedingCoeff=0.8654;MQ=60.09;MQ0=2;MQRankSum=-2.682;QD=44.78;ReadPosRankSum=5.176;VQSLOD=5.9808;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,109,1650	1/1:1,13:14:33.11:696,33,0	0/0:28,0:21:48.16:0,48,715	0/0:27,0:24:51.58:0,52,760	0/1:33,0:32:99:497,0,367	1/1:0,22:23:51.18:1125,51,0	1/1:3,19:22:0.63:819,1,0	1/1:6,19:25:57.17:921,57,0	0/0:22,0:22:63.21:0,63,981	1/1:2,34:36:99:1907,99,0	1/1:2,22:24:66.21:1227,66,0	1/1:2,19:22:49.41:1059,49,0	0/0:16,0:16:48.14:0,48,700	1/1:0,12:14:30.10:662,30,0	1/1:1,18:19:42.14:926,42,0	1/1:2,24:25:54.19:1192,54,0	1/1:4,16:21:38.92:807,39,0	1/1:1,17:19:42.14:895,42,0	1/1:4,14:18:45.12:786,45,0	1/1:2,31:33:78.26:1601,78,0	1/1:2,24:26:42.14:897,42,0	1/1:3,16:18:48.16:1029,48,0	0/0:21,0:21:57.14:0,57,807	0/0:26,0:26:69.22:0,69,1049	1/1:2,28:31:63.22:1390,63,0	1/1:0,35:36:99:2186,108,0	1/1:1,28:29:69.24:1522,69,0	1/1:3,13:16:13.41:517,13,0
chr10	64837695	.	GCA	G	17412.83	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=9.402;DP=669;FS=1.820;HRun=0;HaplotypeScore=87.0381;InbreedingCoeff=0.9675;MQ=83.20;MQ0=5;MQRankSum=-3.193;QD=37.29;ReadPosRankSum=2.451;VQSLOD=7.0778;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,108,1943	1/1:1,15:15:42.14:588,42,0	0/0:29,0:29:59.35:0,59,1180	0/0:19,0:17:13.74:0,14,763	0/0:33,0:33:93.32:0,93,1666	1/1:1,24:25:69.23:966,69,0	1/1:0,13:13:33.11:462,33,0	1/1:2,25:27:75.22:1015,75,0	0/0:17,0:17:45.15:0,45,803	1/1:2,27:29:81.25:1105,81,0	1/1:0,14:14:33.04:462,33,0	1/1:0,31:31:90.30:1261,90,0	0/0:21,0:21:54.19:0,54,970	1/1:1,27:28:75.25:1050,75,0	1/1:1,16:17:45.15:630,45,0	1/1:0,22:22:63.21:882,63,0	1/1:1,18:19:51.17:714,51,0	1/1:0,19:18:51.17:714,51,0	1/1:1,16:18:51.17:714,51,0	1/1:2,23:25:69.23:966,69,0	1/1:1,51:51:99:1849,132,0	1/1:1,24:25:69.23:966,69,0	0/0:23,0:23:69.24:0,69,1225	0/0:24,0:24:66.23:0,66,1173	1/1:3,26:28:72.24:1009,72,0	1/1:4,25:28:72.24:1009,72,0	1/1:1,24:25:72.24:1008,72,0	1/1:0,4:4:3.01:42,3,0
chr10	64838378	.	A	AT	15895.91	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=-9.609;DP=641;FS=6.997;HRun=7;HaplotypeScore=61.6594;InbreedingCoeff=0.9660;MQ=70.60;MQ0=0;MQRankSum=-2.102;QD=31.54;ReadPosRankSum=2.359;VQSLOD=4.8301;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,27:31:78.24:942,78,0	1/1:0,5:5:15.05:181,15,0	0/0:15,0:15:17.38:0,17,153	0/0:6,0:6:3.66:0,4,93	1/1:8,27:35:68.23:1015,68,0	1/1:3,21:24:48.15:580,48,0	1/1:0,16:16:45.14:544,45,0	0/0:35,0:35:90.11:0,90,857	0/0:10,0:10:27.04:0,27,261	1/1:4,30:34:99:1178,99,0	1/1:4,29:33:90.27:1079,90,0	1/1:1,17:18:45.14:544,45,0	0/0:22,0:22:63.09:0,63,604	1/1:5,21:26:63.19:761,63,0	1/1:2,24:26:72.22:870,72,0	1/1:3,17:20:51.16:613,51,0	1/1:1,22:23:66.20:797,66,0	1/1:2,16:18:48.15:580,48,0	1/1:0,14:14:42.12:498,42,0	1/1:2,19:21:57.13:672,57,0	1/1:1,26:27:72.22:870,72,0	1/1:0,21:22:60.10:704,60,0	0/0:25,0:25:60.09:0,60,579	0/0:24,0:24:66.10:0,66,637	1/1:2,28:30:84.26:1015,84,0	1/1:4,28:32:84.25:1003,84,0	1/1:3,36:39:90.27:1087,90,0	1/1:0,10:10:30.09:362,30,0
chr10	64839188	.	T	TG	312.26	PASS	AB=1.000;AC=3;AF=0.056;AN=54;BaseQRankSum=-2.540;DP=546;FS=33.769;HRun=2;HaplotypeScore=75.2710;InbreedingCoeff=0.6599;MQ=54.47;MQ0=81;MQRankSum=0.468;QD=9.18;ReadPosRankSum=-1.775;VQSLOD=-0.7486;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:25:35.92:0,36,385	0/0:8,0:8:23.95:0,24,244	0/0:22,0:12:18.10:0,18,150	0/1:14,0:6:1.37:1,0,23	0/0:25,0:24:44.43:0,44,437	0/0:18,0:14:14.77:0,15,110	0/0:10,0:7:14.90:0,15,131	1/1:4,15:14:35.77:406,36,0	0/0:17,0:15:26.89:0,27,246	0/0:44,0:39:99:0,114,1325	0/0:20,0:20:38.80:0,39,400	0/0:22,0:18:27.06:0,27,309	0/0:25,0:19:36.05:0,36,412	0/0:22,0:22:38.79:0,39,383	0/0:30,0:24:33.05:0,33,367	0/0:17,0:15:38.27:0,38,374	0/0:19,0:14:21.07:0,21,255	0/0:14,0:12:15.01:0,15,156	0/0:18,0:13:20.55:0,21,280	0/0:28,0:28:83.93:0,84,907	0/0:8,0:6:5.97:0,6,46	0/0:12,0:12:14.98:0,15,163	0/0:21,0:21:41.80:0,42,455	0/0:21,0:14:24.02:0,24,238	0/0:14,0:14:38.98:0,39,424	0/0:14,0:13:32.82:0,33,310	0/0:30,0:28:41.58:0,42,440	./.
chr10	64839697	.	T	TGC	25899.75	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=10.731;DP=621;FS=22.034;HRun=0;HaplotypeScore=103.9711;InbreedingCoeff=0.9949;MQ=80.76;MQ0=0;MQRankSum=-5.842;QD=52.11;ReadPosRankSum=3.548;VQSLOD=3.6800;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,45:46:99:2251,111,0	1/1:1,6:7:18.06:365,18,0	0/0:20,0:20:60.13:0,60,925	0/0:19,0:19:54.16:0,54,774	1/1:0,17:17:42.14:852,42,0	1/1:1,16:17:48.16:973,48,0	1/1:0,24:25:66.23:1337,66,0	1/1:1,28:30:87.28:1728,87,0	0/0:23,0:23:69.22:0,69,1096	1/1:1,18:19:54.18:1096,54,0	1/1:0,23:23:60.21:1212,60,0	1/1:0,26:27:72.25:1459,72,0	0/0:28,0:28:81.28:0,81,1316	1/1:0,7:7:15.05:304,15,0	1/1:0,24:25:69.24:1400,69,0	1/1:0,15:17:45.15:906,45,0	1/1:0,16:17:32.39:668,32,0	1/1:0,15:14:39.13:791,39,0	1/1:0,17:19:57.20:1114,57,0	1/1:0,27:29:75.26:1519,75,0	1/1:1,38:40:90.31:1826,90,0	1/1:2,18:20:51.17:1032,51,0	0/0:18,0:18:51.17:0,51,832	0/0:16,0:16:45.15:0,45,734	1/1:0,20:21:54.19:1095,54,0	1/1:0,27:28:81.22:1533,81,0	1/1:0,34:38:96.33:1892,96,0	1/1:0,10:10:27.09:548,27,0
chr10	64840504	.	GGAGGGGGAAGAAGAGA	G	11065.52	PASS	AC=34;AF=0.654;AN=52;BaseQRankSum=10.957;DP=401;FS=68.138;HRun=0;HaplotypeScore=170.6788;InbreedingCoeff=0.8788;MQ=72.95;MQ0=5;MQRankSum=-11.860;QD=76.84;ReadPosRankSum=1.786;VQSLOD=2.2207;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:67.54:0,68,8365	./.	0/0:27,0:15:42.11:0,42,1392	0/0:39,0:24:56.57:0,57,2361	0/0:22,0:22:66.21:0,66,4502	1/1:0,3:3:9.03:370,9,0	1/1:0,6:6:12.04:586,12,0	0/0:18,0:18:51.18:0,51,2537	0/0:25,0:25:72.25:0,72,5077	1/1:0,10:10:24.04:702,24,0	1/1:1,10:10:15.05:732,15,0	1/1:0,9:9:21.07:1026,21,0	0/0:32,0:32:93.32:0,93,6376	1/1:1,8:8:18.06:879,18,0	1/1:0,6:6:9.03:440,9,0	1/1:1,8:8:21.07:1018,21,0	1/1:0,8:8:3.01:147,3,0	1/1:1,3:4:3.01:147,3,0	1/1:0,7:7:21.07:575,21,0	1/1:1,14:15:27.09:1067,27,0	1/1:3,0:3:3.01:52,3,0	1/1:2,7:9:27.08:862,27,0	0/0:24,0:24:69.24:0,69,4822	0/0:26,0:26:78.27:0,78,5428	1/1:0,15:15:12.04:586,12,0	1/1:0,13:13:33.08:1291,33,0	1/1:0,6:6:12.04:586,12,0	./.
chr10	64840519	.	GA	G	2216.55	PASS	AB=1.000;AC=35;AF=0.648;AN=54;BaseQRankSum=13.299;DP=435;FS=90.047;HRun=5;HaplotypeScore=114.8311;InbreedingCoeff=0.8481;MQ=60.70;MQ0=9;MQRankSum=-11.369;QD=12.52;ReadPosRankSum=0.139;VQSLOD=-0.7655;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,120,1569	1/1:0,1:1:3.01:34,3,0	0/0:33,0:13:26.96:0,27,299	0/0:39,0:20:22.14:0,22,358	0/0:23,0:23:57.19:0,57,779	1/1:3,5:8:20.89:204,21,0	0/1:7,0:7:6.97:54,0,7	0/0:21,0:20:50.57:0,51,379	0/0:23,0:23:60.20:0,60,818	1/1:10,2:12:20.81:187,21,0	1/1:10,1:11:17.63:119,18,0	1/1:9,0:9:20.47:120,20,0	0/0:29,0:29:72.16:0,72,943	1/1:9,0:8:17.55:103,18,0	1/1:6,2:8:8.77:51,9,0	1/1:9,1:9:23.21:146,23,0	1/1:8,3:11:8.94:85,9,0	1/1:4,0:4:2.92:17,3,0	1/1:7,0:7:20.81:187,21,0	1/1:15,3:19:29.58:238,30,0	1/1:0,8:7:18.05:198,18,0	1/1:11,4:15:26.74:237,27,0	0/0:23,0:23:60.20:0,60,817	0/0:25,0:25:72.21:0,72,962	1/1:15,0:15:11.70:68,12,0	1/1:13,2:15:32.41:239,32,0	1/1:6,2:8:17.72:136,18,0	./.
chr10	64840586	.	AGAG	A	65.16	PASS	AB=1.000;AC=14;AF=0.280;AN=50;BaseQRankSum=7.956;DP=292;FS=21.166;HRun=0;HaplotypeScore=86.5653;InbreedingCoeff=0.1402;MQ=40.12;MQ0=15;MQRankSum=-7.097;QD=0.71;ReadPosRankSum=-1.221;VQSLOD=0.0259;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:84.29:0,84,1628	0/0:2,0:2:3.43:0,3,20	./.	0/0:17,0:2:5.95:0,6,61	1/1:11,6:16:13.74:130,14,0	0/0:9,0:9:6.97:0,7,70	0/1:5,0:3:0:0,0,0	0/1:12,0:7:5.08:5,0,27	0/0:14,0:14:27.08:0,27,521	0/1:6,0:6:3.83:4,0,29	0/1:7,0:7:3.38:3,0,12	1/1:3,0:3:4.87:16,5,0	0/0:31,0:31:66.13:0,66,1222	0/1:6,0:6:4.44:4,0,14	0/1:4,0:4:3.18:3,0,13	0/0:2,0:2:2.97:0,3,20	0/0:5,0:5:3.04:0,3,47	./.	0/1:5,0:3:7.40:12,0,7	0/0:7,0:7:3.40:0,3,34	0/0:5,0:5:0.84:0,1,16	0/1:23,0:21:1.40:1,0,13	0/0:23,0:23:30.10:0,30,573	0/0:25,0:25:69.23:0,69,1342	1/1:4,0:4:0.89:2,1,0	0/0:7,0:7:1.23:0,1,17	0/0:7,0:5:0.26:0,0,14	./.
chr10	64840591	.	A	AG	1841.86	PASS	AB=0.667;AC=31;AF=0.620;AN=50;BaseQRankSum=9.845;DP=285;FS=34.905;HRun=2;HaplotypeScore=78.4484;InbreedingCoeff=0.7675;MQ=39.60;MQ0=12;MQRankSum=-9.059;QD=18.60;ReadPosRankSum=-2.005;VQSLOD=1.4934;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:93.27:0,93,1136	1/1:0,2:2:6.02:73,6,0	./.	0/0:18,0:4:4.71:0,5,71	0/0:16,0:15:23.80:0,24,217	1/1:0,9:9:24.07:305,24,0	1/1:2,3:3:2.97:20,3,0	0/0:11,0:6:12.01:0,12,132	0/0:14,0:14:36.08:0,36,420	1/1:2,5:7:21.05:255,21,0	1/1:3,5:8:11.52:129,12,0	1/1:0,2:2:6.01:66,6,0	0/0:29,0:29:78.20:0,78,947	1/1:0,5:5:15.05:187,15,0	1/1:2,3:5:9.03:116,9,0	1/1:3,1:4:11.23:78,11,0	1/1:0,5:5:15.05:203,15,0	./.	0/0:5,0:3:9.03:0,9,104	1/1:1,5:6:9.03:125,9,0	0/1:3,3:5:2.37:38,0,2	1/1:20,3:21:9.02:114,9,0	0/0:23,0:23:45.13:0,45,541	0/0:27,0:27:81.25:0,81,999	1/1:1,2:3:3.01:33,3,0	1/1:0,4:4:12.04:152,12,0	1/1:2,3:4:12.03:138,12,0	./.
chr10	64840663	.	G	GAGA	2390.28	PASS	AB=1.000;AC=37;AF=0.712;AN=52;BaseQRankSum=7.200;DP=425;FS=49.272;HRun=0;HaplotypeScore=68.6275;InbreedingCoeff=0.6443;MQ=32.14;MQ0=35;MQRankSum=-6.623;QD=8.95;ReadPosRankSum=-0.872;VQSLOD=0.3983;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:15:0.58:17,1,0	1/1:3,1:4:6.02:71,6,0	0/0:25,0:2:6.02:0,6,98	0/0:26,0:4:8.50:0,9,149	1/1:15,0:12:6.69:29,7,0	1/1:16,0:12:12.04:156,12,0	0/1:39,0:35:5:99,0,5	0/0:16,0:9:8.30:0,8,43	0/0:13,0:12:24.07:0,24,323	1/1:17,2:16:29.33:450,29,0	1/1:15,0:10:17.97:188,18,0	1/1:7,0:4:9.03:130,9,0	0/0:24,0:22:31.48:0,31,607	1/1:3,8:10:6.02:76,6,0	1/1:11,0:6:12.04:197,12,0	1/1:5,0:3:9.03:114,9,0	1/1:4,0:2:3.01:38,3,0	./.	1/1:9,0:6:0.89:117,1,0	1/1:11,1:9:12.51:167,13,0	./.	1/1:55,1:50:12.74:226,13,0	0/0:27,0:27:32.65:0,33,406	0/0:21,0:21:63.17:0,63,906	1/1:5,0:5:10.33:179,10,0	1/1:7,1:4:6.01:61,6,0	1/1:7,0:6:9.03:121,9,0	1/1:6,0:3:6.02:134,6,0
chr10	64840666	.	GAGA	G	308.82	PASS	AB=1.000;AC=7;AF=0.194;AN=36;BaseQRankSum=-3.248;DP=425;FS=6.719;HRun=0;HaplotypeScore=74.4520;InbreedingCoeff=0.4574;MQ=31.75;MQ0=35;MQRankSum=2.526;QD=4.06;ReadPosRankSum=3.074;VQSLOD=0.9441;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:15:4.48:0,4,21	0/0:4,0:4:0:0,0,0	./.	./.	0/0:16,0:12:3.01:0,3,34	0/0:16,0:12:2.96:0,3,19	0/0:50,0:44:5.88:0,6,37	0/0:15,0:10:9.12:0,9,46	./.	0/0:20,0:17:10.56:0,11,102	0/0:15,0:10:0:0,0,0	0/0:6,0:4:5.87:0,6,37	1/1:19,5:21:8.64:248,9,0	./.	0/0:10,0:5:1.93:0,2,15	./.	./.	./.	./.	0/0:13,0:10:2.22:0,2,7	./.	0/0:56,0:51:2.92:0,3,17	1/1:25,1:24:6.94:77,7,0	1/1:21,0:21:8.76:90,9,0	0/1:5,0:5:0:0,0,0	./.	0/0:7,0:6:8.92:0,9,67	0/0:6,0:3:6.02:0,6,70
chr10	64840936	.	G	GGA	382.14	PASS	AB=0.927;AC=19;AF=0.432;AN=44;BaseQRankSum=-0.928;DP=119;FS=0.000;HRun=0;HaplotypeScore=72.1089;InbreedingCoeff=-0.3877;MQ=25.69;MQ0=5;MQRankSum=-0.551;QD=4.29;ReadPosRankSum=-5.131;VQSLOD=0.4460;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:1,0:1:2.92:0,3,17	0/0:3,0:2:0.99:0,1,23	./.	./.	./.	0/0:6,0:5:3.61:0,4,99	0/1:6,1:4:10.22:51,0,10	0/1:6,0:4:30.68:113,0,31	1/1:4,0:4:2.92:17,3,0	0/1:2,0:2:17.38:19,0,17	./.	0/1:5,1:6:41.23:41,0,59	./.	0/1:4,1:5:19.28:42,0,19	0/1:5,1:4:24.30:35,0,24	0/1:12,0:9:16.36:16,0,218	0/0:2,0:1:2.88:0,3,15	0/0:3,0:3:5.76:0,6,52	0/1:5,0:3:14.86:38,0,15	0/1:4,1:4:33.69:34,0,69	./.	0/0:3,0:1:2.98:0,3,22	1/1:3,0:2:6:51,6,0	0/1:3,1:4:12:12,0,20	0/1:4,0:3:0.61:1,0,41	0/1:6,0:4:13.25:13,0,28	0/1:11,0:9:19.72:20,0,156	1/1:3,0:3:1.82:5,2,0
chr10	64840942	.	A	AG	1581.02	PASS	AB=0.937;AC=32;AF=0.696;AN=46;BaseQRankSum=6.128;DP=169;FS=6.368;HRun=2;HaplotypeScore=74.9087;InbreedingCoeff=0.1866;MQ=25.29;MQ0=12;MQRankSum=1.290;QD=12.85;ReadPosRankSum=3.828;VQSLOD=2.5397;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:5,0:5:5.10:24,0,5	1/1:2,2:2:6.02:82,6,0	./.	./.	0/0:14,0:13:6.92:0,7,62	1/1:4,2:5:11.35:91,11,0	0/1:11,1:7:11.93:21,0,12	0/1:9,0:5:5.85:147,0,6	0/0:5,0:4:3.01:0,3,39	1/1:3,0:2:6.01:68,6,0	./.	1/1:6,1:6:14.53:161,15,0	./.	0/1:4,3:7:1.69:144,0,2	1/1:2,4:4:9:97,9,0	1/1:10,2:9:26.38:260,26,0	1/1:3,0:1:3.01:31,3,0	0/1:7,0:6:40.71:60,0,41	0/1:5,0:3:15.43:15,0,56	1/1:7,0:5:11.82:104,12,0	./.	1/1:4,1:1:3.01:40,3,0	0/0:4,0:3:5.81:0,6,34	0/0:11,0:10:3.97:0,4,40	1/1:3,1:3:8.94:84,9,0	1/1:6,1:4:12.01:132,12,0	1/1:7,4:9:16.76:118,17,0	1/1:2,1:3:3.01:41,3,0
chr10	64840943	.	GAA	G	2040.37	PASS	AB=0.776;AC=32;AF=0.696;AN=46;BaseQRankSum=6.606;DP=180;FS=5.552;HRun=2;HaplotypeScore=76.6111;InbreedingCoeff=0.1689;MQ=25.00;MQ0=15;MQRankSum=1.754;QD=15.46;ReadPosRankSum=5.336;VQSLOD=1.1909;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:4,1:5:19.58:20,0,28	1/1:4,1:3:6.02:77,6,0	./.	./.	0/0:14,1:14:14.86:0,15,128	1/1:2,4:5:12.04:178,12,0	0/1:12,1:7:21.42:21,0,28	0/1:3,6:5:5.85:149,0,6	0/0:5,0:4:3.01:0,3,59	1/1:2,2:2:6.01:68,6,0	./.	1/1:3,4:6:14.99:185,15,0	./.	0/1:5,2:7:21.38:128,0,21	1/1:5,1:4:8.97:108,9,0	1/1:3,9:9:27.09:396,27,0	1/1:2,1:1:3.01:31,3,0	0/1:6,2:6:64.59:74,0,65	0/1:3,2:3:36.24:36,0,50	1/1:3,4:5:11.97:139,12,0	./.	1/1:5,1:1:3.01:40,3,0	0/0:4,0:3:5.65:0,6,31	0/0:11,0:10:6.68:0,7,34	1/1:3,3:4:8.84:109,9,0	1/1:4,3:5:11.98:151,12,0	1/1:6,5:9:18.06:258,18,0	1/1:3,1:3:2.98:21,3,0
chr10	64840992	.	GAGA	G	852.28	PASS	AB=0.938;AC=20;AF=0.400;AN=50;BaseQRankSum=1.758;DP=750;FS=30.315;HRun=0;HaplotypeScore=131.9888;InbreedingCoeff=-0.0136;MQ=22.12;MQ0=119;MQRankSum=-2.027;QD=1.76;ReadPosRankSum=-2.566;VQSLOD=0.3874;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:34,0:18:45.41:169,0,45	1/1:10,2:8:4.89:45,5,0	./.	./.	0/1:33,0:28:0.18:0,0,238	0/0:30,2:21:0.33:0,0,33	0/1:102,2:76:22.92:76,0,23	0/0:19,0:1:0:0,0,0	0/0:12,0:9:9.03:0,9,137	0/1:35,4:16:92.57:93,0,111	1/1:13,2:8:0.47:1,0,0	0/0:18,0:12:4.12:0,4,42	0/0:14,0:13:11.40:0,11,150	0/0:17,1:13:7.38:0,7,99	0/1:21,1:9:10.65:11,0,20	0/1:18,6:15:16.55:137,0,17	0/0:22,0:14:4.35:0,4,208	0/0:25,0:14:4.13:0,4,135	1/1:1,1:2:3.01:37,3,0	0/1:16,1:12:22.86:23,0,142	0/1:12,0:8:2.11:2,0,101	0/1:96,3:71:27.24:27,0,31	0/0:50,0:37:24.50:0,24,213	0/0:43,0:37:38.95:0,39,470	1/1:12,2:8:10.05:105,10,0	0/1:26,7:20:99:221,0,163	1/1:16,6:17:7.05:46,7,0	./.
chr10	64841080	.	AAGGAAGAGG	A	661.29	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.593;DP=662;FS=2.908;HRun=0;HaplotypeScore=184.3290;InbreedingCoeff=0.9237;MQ=47.22;MQ0=13;MQRankSum=-1.437;QD=34.80;ReadPosRankSum=-3.766;VQSLOD=2.6319;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:62.81:0,63,2509	0/0:7,0:7:21.07:0,21,824	0/0:41,0:13:14.49:0,14,626	0/0:38,0:17:9.65:0,10,861	0/0:17,0:17:42.06:0,42,1591	0/0:16,0:15:39.13:0,39,1647	0/0:26,0:25:36.12:0,36,1458	1/1:3,15:16:42.05:756,42,0	0/0:16,0:16:42.14:0,42,1569	0/0:35,0:33:92.53:0,93,3587	0/0:30,0:29:78.13:0,78,2859	0/0:12,0:12:33.58:0,34,1330	0/0:18,0:19:27.09:0,27,1168	0/0:20,0:20:19.75:0,20,1477	0/0:18,0:15:39.13:0,39,1657	0/0:25,0:24:66.23:0,66,2738	0/0:28,0:28:47.96:0,48,3124	0/0:17,0:16:23.53:0,24,1407	0/0:14,0:13:39.12:0,39,1413	0/0:36,0:35:99:0,102,3931	0/0:26,0:25:34.88:0,35,2466	0/0:33,0:30:71.98:0,72,2819	0/0:18,0:18:44.95:0,45,2094	0/0:31,0:31:51.65:0,52,2262	0/0:27,0:26:72.14:0,72,2580	0/0:23,0:23:54.33:0,54,2143	0/0:19,0:18:48.16:0,48,1915	0/0:23,0:23:63.22:0,63,2697
chr10	64841179	.	A	AAG	1350.49	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-8.918;DP=597;FS=0.000;HRun=0;HaplotypeScore=78.0824;InbreedingCoeff=0.9863;MQ=59.92;MQ0=2;MQRankSum=2.372;QD=32.15;ReadPosRankSum=-4.464;VQSLOD=3.5841;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:54.11:0,54,636	0/0:9,0:8:21.07:0,21,267	0/0:28,0:20:32.82:0,33,354	0/0:32,0:19:38.52:0,39,430	0/0:23,0:23:54.07:0,54,668	0/0:17,0:16:30.05:0,30,363	0/0:19,0:19:51.10:0,51,604	1/1:6,34:38:99:1445,99,0	0/0:12,0:12:27.07:0,27,330	0/0:34,0:33:72.15:0,72,859	0/0:22,0:20:51.12:0,51,619	0/0:10,0:10:24.04:0,24,288	0/0:17,0:17:32.82:0,33,407	0/0:14,0:14:33.11:0,33,420	0/0:15,0:14:30.10:0,30,379	0/0:18,0:17:33.10:0,33,406	0/0:29,0:28:72.23:0,72,915	0/0:17,0:17:31.45:0,31,384	0/0:29,0:28:63.19:0,63,789	0/0:25,0:25:70.02:0,70,842	0/0:15,0:15:36.09:0,36,443	0/0:13,0:13:20.98:0,21,230	0/0:17,0:17:39.09:0,39,478	0/0:18,0:18:48.15:0,48,610	0/0:27,0:27:69.16:0,69,844	0/0:27,0:27:69.17:0,69,845	0/0:26,0:26:60.14:0,60,720	0/0:22,0:22:57.13:0,57,692
chr10	64841381	.	GT	G	8569.29	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=9.237;DP=497;FS=13.835;HRun=7;HaplotypeScore=131.8755;InbreedingCoeff=0.9890;MQ=63.86;MQ0=0;MQRankSum=-6.954;QD=23.54;ReadPosRankSum=-1.972;VQSLOD=2.9423;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:42.05:0,42,489	1/1:2,9:11:26.85:229,27,0	0/0:14,0:14:15.06:0,15,233	0/0:8,0:7:17.98:0,18,183	0/0:19,0:19:35.98:0,36,412	1/1:2,22:24:65.63:562,66,0	1/1:1,7:8:20.79:163,21,0	1/1:1,31:31:90.19:913,90,0	0/0:23,0:23:66.18:0,66,795	1/1:3,22:25:69.15:700,69,0	1/1:2,27:29:77.15:560,77,0	1/1:2,13:15:41.58:304,42,0	0/0:9,0:9:24.07:0,24,291	1/1:4,10:14:38.62:297,39,0	1/1:4,14:18:47.55:362,48,0	1/1:0,16:16:47.70:388,48,0	1/1:4,9:13:27.74:229,28,0	1/1:1,4:5:12.03:122,12,0	1/1:2,12:14:33.05:326,33,0	1/1:1,23:24:68.47:547,68,0	1/1:1,8:9:24:226,24,0	1/1:2,21:23:59.33:442,59,0	0/0:20,0:20:60.04:0,60,702	0/0:13,0:13:36.10:0,36,438	1/1:2,24:26:74.17:590,74,0	1/1:3,16:19:51.10:514,51,0	1/1:1,21:22:65.76:585,66,0	1/1:0,17:17:51.09:510,51,0
chr10	64841393	.	C	CTCTATCTATCTA	14814.96	PASS	AB=1.000;AC=43;AF=0.768;AN=56;BaseQRankSum=9.465;DP=654;FS=5.637;HRun=0;HaplotypeScore=353.8893;InbreedingCoeff=0.7887;MQ=54.04;MQ0=1;MQRankSum=-9.049;QD=26.60;ReadPosRankSum=-1.980;VQSLOD=2.7993;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:16,16:35:18.87:933,19,0	1/1:15,0:15:20.10:686,20,0	0/0:22,0:16:5.89:0,6,54	0/0:12,0:10:9.03:0,9,141	1/1:19,0:19:3.01:164,3,0	1/1:28,0:28:16.84:482,17,0	1/1:14,0:13:6.02:157,6,0	1/1:62,0:58:85.17:2244,85,0	0/0:20,0:20:45.13:0,45,1325	1/1:31,0:31:72.25:2121,72,0	1/1:39,0:38:9.20:197,9,0	1/1:20,0:20:5.89:146,6,0	0/0:11,0:11:33.11:0,33,947	1/1:17,0:17:3.36:139,3,0	1/1:29,0:29:9.97:440,10,0	1/1:25,0:25:24.05:729,24,0	1/1:14,0:14:9.50:348,10,0	1/1:10,0:10:18.06:757,18,0	1/1:15,0:15:15.05:399,15,0	1/1:38,0:38:12.41:367,12,0	0/1:14,0:14:0.37:0,0,0	1/1:30,0:30:14.54:469,15,0	0/0:22,0:22:54.17:0,54,1600	0/0:10,0:10:24.08:0,24,752	1/1:25,0:25:15.05:532,15,0	1/1:24,0:24:40.25:1413,40,0	1/1:33,0:33:49.09:1406,49,0	1/1:20,0:20:24.04:684,24,0
chr10	64841421	.	A	ACTAT	7611.96	PASS	AB=0.598;AC=39;AF=0.696;AN=56;BaseQRankSum=3.470;DP=738;FS=17.001;HRun=0;HaplotypeScore=240.6119;InbreedingCoeff=0.6681;MQ=47.04;MQ0=0;MQRankSum=-10.148;QD=12.64;ReadPosRankSum=0.623;VQSLOD=3.1081;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:29:54.43:54,0,282	1/1:1,7:13:2.53:76,3,0	0/0:35,0:29:54.68:0,55,1235	0/0:19,0:17:42.01:0,42,674	1/1:2,0:31:11.99:145,12,0	1/1:1,6:23:17.41:309,17,0	1/1:1,9:17:3.21:24,3,0	1/1:15,3:49:95.72:1526,96,0	0/0:26,0:26:66.22:0,66,1128	1/1:2,14:32:80.61:1325,81,0	1/1:2,18:41:5.82:154,6,0	1/1:1,13:24:3:72,3,0	0/0:16,0:16:45.15:0,45,793	0/1:0,13:21:0.02:0,0,0	0/1:0,25:35:0.06:1,0,0	0/1:5,15:31:0.06:0,0,0	1/1:5,3:18:20.30:425,20,0	1/1:4,8:14:18.06:375,18,0	1/1:8,3:15:26.08:496,26,0	1/1:1,20:36:5.98:110,6,0	0/1:1,16:20:0.02:0,0,0	1/1:3,17:34:12.01:309,12,0	0/0:27,0:27:69.20:0,69,1135	0/0:13,0:13:36.12:0,36,622	1/1:1,0:33:8.34:131,8,0	1/1:2,12:23:50.70:1004,51,0	1/1:1,20:37:40.83:787,41,0	1/1:0,9:19:15.02:287,15,0
chr10	64842176	.	G	GACACATAC	33517.77	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-9.015;DP=635;FS=3.676;HRun=0;HaplotypeScore=156.6167;InbreedingCoeff=0.9859;MQ=85.69;MQ0=0;MQRankSum=-16.442;QD=76.35;ReadPosRankSum=1.236;VQSLOD=5.1667;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:96.04:0,96,2489	1/1:3,7:10:24.08:1013,24,0	0/0:29,0:29:63.22:0,63,1612	0/0:31,0:31:72.10:0,72,1688	1/1:5,27:34:75.26:3143,75,0	1/1:4,16:20:42.14:1799,42,0	1/1:15,12:28:39.13:1670,39,0	0/0:25,0:25:63.22:0,63,1634	0/0:16,0:16:39.13:0,39,1047	1/1:7,6:15:30.10:1100,30,0	1/1:10,10:22:36.12:1408,36,0	1/1:9,17:28:51.18:2142,51,0	0/0:12,0:12:30.10:0,30,802	1/1:7,10:18:30.10:1248,30,0	1/1:6,20:26:51.18:2184,51,0	1/1:7,12:19:39.13:1613,39,0	1/1:10,7:19:30.10:1258,30,0	1/1:7,3:10:12.04:515,12,0	1/1:16,8:25:48.15:1570,48,0	1/1:8,23:31:66.23:2800,66,0	1/1:6,10:17:24.08:957,24,0	1/1:8,17:25:45.14:1821,45,0	0/0:28,0:28:78.27:0,78,2074	0/0:17,0:17:48.16:0,48,1295	1/1:5,17:24:33.11:1413,33,0	1/1:10,16:27:60.19:2413,60,0	1/1:7,22:31:66.20:2817,66,0	1/1:5,4:9:10.06:635,10,0
chr10	64842519	.	T	TA	9790.21	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-10.514;DP=650;FS=0.340;HRun=10;HaplotypeScore=68.3484;InbreedingCoeff=0.9961;MQ=73.22;MQ0=0;MQRankSum=-2.822;QD=23.20;ReadPosRankSum=2.150;VQSLOD=5.6149;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:89.84:0,90,732	1/1:2,9:11:27.07:288,27,0	0/0:20,0:21:19.98:0,20,286	0/0:13,0:15:21.97:0,22,155	0/0:37,2:39:54.88:0,55,651	1/1:7,19:26:51.13:544,51,0	1/1:6,17:23:51.13:541,51,0	0/0:33,0:33:77.85:0,78,632	0/0:16,0:16:38.94:0,39,320	1/1:7,20:27:60.10:621,60,0	1/1:5,17:22:48.08:499,48,0	1/1:1,14:16:36.09:380,36,0	0/0:19,0:20:40.97:0,41,323	1/1:3,15:19:20.32:406,20,0	1/1:3,18:21:42.11:448,42,0	1/1:5,18:23:51.13:544,51,0	1/1:1,36:38:99:1102,105,0	1/1:3,15:18:27:288,27,0	1/1:4,16:20:48.10:503,48,0	1/1:6,22:29:35.30:553,35,0	1/1:3,21:24:57.14:608,57,0	1/1:7,19:27:33.21:530,33,0	0/0:25,0:25:41.90:0,42,345	0/0:22,1:23:33.90:0,34,479	1/1:2,10:13:29.91:302,30,0	1/1:3,21:24:38.51:615,39,0	1/1:5,28:33:59.55:828,60,0	1/1:0,8:8:18.05:192,18,0
chr10	64845525	.	T	TCTTCCTTCCTTC	7284.06	PASS	AB=1.000;AC=20;AF=0.357;AN=56;BaseQRankSum=-9.007;DP=682;FS=5.747;HRun=0;HaplotypeScore=329.3439;InbreedingCoeff=-0.4021;MQ=56.06;MQ0=22;MQRankSum=-5.087;QD=14.31;ReadPosRankSum=-3.876;VQSLOD=1.8988;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:22:20.61:593,0,21	0/0:10,0:10:27.05:0,27,305	0/0:19,0:11:32.30:0,32,617	0/0:21,0:13:14.70:0,15,447	1/1:40,5:45:88.77:2968,89,0	0/1:33,0:32:99:217,0,358	0/1:13,0:13:46.30:78,0,46	0/0:28,0:28:75.40:0,75,1005	0/0:21,0:21:63.20:0,63,2019	0/1:34,0:33:99:251,0,479	0/1:29,0:28:99:296,0,429	0/1:27,0:24:99:306,0,337	0/0:25,0:25:72.22:0,72,2331	0/1:19,0:19:94.52:95,0,252	0/1:42,0:40:99:241,0,541	0/1:21,0:21:99:143,0,337	0/1:24,0:24:99:172,0,271	0/1:15,0:14:86.98:87,0,232	0/1:24,0:23:99:630,0,112	0/1:38,0:37:99:362,0,350	0/1:17,0:16:99:170,0,158	0/1:21,0:21:99:148,0,361	0/0:24,0:24:66.23:0,66,2296	0/0:17,0:17:41.92:0,42,1265	0/1:32,0:32:99:157,0,581	0/1:24,0:23:99:138,0,350	0/1:29,0:28:99:231,0,460	0/0:7,0:7:15.04:0,15,201
chr10	64845548	.	TTCTTTC	T	1207.48	PASS	AB=1.000;AC=8;AF=0.143;AN=56;BaseQRankSum=-2.103;DP=666;FS=1.760;HRun=0;HaplotypeScore=265.8488;InbreedingCoeff=0.1577;MQ=54.10;MQ0=25;MQRankSum=-4.640;QD=6.53;ReadPosRankSum=-6.556;VQSLOD=1.0348;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:22:18.14:124,0,18	0/0:12,0:12:16.96:0,17,585	0/0:21,0:10:21.07:0,21,418	0/0:16,0:11:11.91:0,12,268	0/1:42,0:42:33.39:292,0,33	0/0:33,0:32:59.75:0,60,1013	0/1:10,0:10:30.86:31,0,76	1/1:22,6:27:49.28:876,49,0	0/0:24,0:24:69.24:0,69,2146	0/0:30,0:29:25.91:0,26,1143	0/0:27,0:26:46.30:0,46,1187	0/0:20,0:17:13.77:0,14,718	0/0:24,0:24:63.22:0,63,2065	0/0:15,0:15:33.11:0,33,707	0/0:39,0:37:35.14:0,35,1274	0/0:18,0:18:36.12:0,36,765	0/1:29,0:29:6.20:6,0,539	0/0:18,0:17:30.72:0,31,598	0/1:17,0:16:7.34:7,0,494	0/1:35,0:34:3.06:3,0,895	0/0:17,0:16:17.58:0,18,469	0/0:22,0:22:36.76:0,37,899	0/0:30,0:30:84.26:0,84,2646	0/0:17,0:17:22.20:0,22,1414	0/0:34,0:34:69.75:0,70,1399	0/0:24,0:23:60.07:0,60,1096	0/0:30,0:29:62.93:0,63,1136	0/0:8,0:8:18.06:0,18,370
chr10	64845552	.	TTC	T	3644.08	PASS	AB=0.995;AC=23;AF=0.411;AN=56;BaseQRankSum=-2.304;DP=660;FS=0.711;HRun=0;HaplotypeScore=208.1158;InbreedingCoeff=-0.1429;MQ=54.75;MQ0=24;MQRankSum=-3.618;QD=7.42;ReadPosRankSum=-11.588;VQSLOD=-0.3033;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:21,3:22:11.50:282,11,0	0/1:12,0:12:33.60:34,0,85	0/0:20,0:8:21.53:0,22,299	0/0:17,0:12:17.62:0,18,251	1/1:29,11:40:86.54:911,87,0	0/1:33,0:32:32.16:32,0,96	1/1:9,1:10:5.16:84,5,0	1/1:19,7:25:52.23:554,52,0	0/0:24,0:24:72.25:0,72,1274	0/1:30,0:29:99:374,0,122	0/1:28,0:27:99:199,0,123	0/1:20,0:17:67.41:67,0,108	0/0:22,0:22:63.22:0,63,1136	0/0:13,0:13:17.69:0,18,119	0/1:39,0:37:99:106,0,162	0/0:19,0:19:16.35:0,16,142	0/1:28,1:29:53.53:54,0,76	0/1:19,1:18:90.55:91,0,91	0/1:17,0:16:21.12:219,0,21	0/1:31,0:30:76.67:322,0,77	0/1:17,0:16:22.18:22,0,49	0/1:22,0:22:57.59:58,0,97	0/0:29,0:29:87.27:0,87,1518	0/0:17,0:17:40.31:0,40,839	0/1:38,0:38:59.46:59,0,196	0/1:26,0:25:99:144,0,106	0/1:29,0:28:32.03:32,0,138	0/0:8,0:8:8.69:0,9,65
chr10	64845554	.	C	CTT	20425.24	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=10.851;DP=664;FS=12.749;HRun=3;HaplotypeScore=154.8073;InbreedingCoeff=0.9832;MQ=55.26;MQ0=24;MQRankSum=-2.758;QD=38.39;ReadPosRankSum=2.878;VQSLOD=3.4545;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,18:22:11.76:377,12,0	1/1:0,12:12:33.11:615,33,0	0/0:23,0:12:23.78:0,24,343	0/0:17,0:12:21.30:0,21,263	1/1:11,29:40:87.25:1521,87,0	1/1:2,31:32:60.21:1158,60,0	1/1:1,9:10:12.04:201,12,0	1/1:24,0:23:32.47:414,32,0	0/0:24,0:24:72.24:0,72,1092	1/1:0,30:31:90.30:1583,90,0	1/1:0,28:27:75.26:1415,75,0	1/1:0,20:17:42.14:797,42,0	0/0:22,0:22:66.21:0,66,979	1/1:0,12:12:33.11:638,33,0	1/1:1,37:36:78.27:1493,78,0	1/1:2,18:20:39.09:715,39,0	1/1:2,27:29:32.09:674,32,0	1/1:4,16:20:21.17:680,21,0	1/1:2,14:15:45.13:793,45,0	1/1:2,28:29:78.22:1417,78,0	1/1:3,14:16:29.59:530,30,0	1/1:0,22:22:56.76:1060,57,0	0/0:29,0:29:87.27:0,87,1300	0/0:17,0:17:40.31:0,40,722	1/1:1,36:37:75.57:1501,76,0	1/1:0,26:25:69.23:1269,69,0	1/1:2,29:31:66:1228,66,0	1/1:0,8:8:18.06:348,18,0
chr10	64846740	.	G	GCA	2632.77	PASS	AB=0.910;AC=29;AF=0.558;AN=52;BaseQRankSum=4.644;DP=631;FS=3.520;HRun=0;HaplotypeScore=145.9650;InbreedingCoeff=-0.1044;MQ=62.88;MQ0=12;MQRankSum=-2.700;QD=5.67;ReadPosRankSum=-2.637;VQSLOD=3.0858;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:39:2.28:0,2,24	0/1:12,1:11:27.15:38,0,27	./.	./.	1/1:14,0:18:2.99:24,3,0	0/1:21,0:21:10.90:188,0,11	1/1:38,0:38:18.38:243,18,0	1/1:14,0:14:5.55:25,6,0	0/0:13,0:13:12.03:0,12,133	0/1:21,10:32:47.53:358,0,48	1/1:15,2:17:11.37:150,11,0	0/1:14,4:18:46.75:123,0,47	0/0:7,0:9:11.86:0,12,110	1/1:21,0:20:14.18:145,14,0	1/1:11,4:14:2.04:7,2,0	1/1:16,10:23:13.21:99,13,0	0/1:28,0:28:63.60:294,0,64	0/1:16,0:15:60.50:104,0,61	0/1:19,0:19:17.43:157,0,17	0/1:22,0:21:10.57:119,0,11	0/1:38,4:40:4.40:283,0,4	0/1:22,1:23:23.41:103,0,23	0/0:20,0:20:33.07:0,33,357	0/0:37,1:41:20.10:0,20,706	0/1:13,10:23:27.26:39,0,27	1/1:23,0:23:8.85:175,9,0	0/1:16,5:21:22.32:22,0,67	0/1:12,0:10:48.75:101,0,49
chr10	64846862	.	CT	C	9015.66	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=3.191;DP=558;FS=6.432;HRun=10;HaplotypeScore=68.8473;InbreedingCoeff=0.9977;MQ=70.19;MQ0=1;MQRankSum=-0.875;QD=20.73;ReadPosRankSum=4.936;VQSLOD=5.6111;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,23:25:65.98:572,66,0	1/1:0,12:12:32.99:287,33,0	0/0:15,0:11:21.01:0,21,213	0/0:19,0:17:33.51:0,34,316	1/1:0,29:29:74.98:650,75,0	1/1:2,15:17:38.99:339,39,0	1/1:3,13:16:32.98:286,33,0	0/0:31,0:32:71.51:0,72,751	0/0:15,0:15:27.07:0,27,298	1/1:3,32:35:89.94:778,90,0	1/1:2,26:28:65.97:573,66,0	1/1:1,13:14:26.99:234,27,0	0/0:13,0:13:30.55:0,31,333	1/1:2,19:21:44.98:388,45,0	1/1:2,20:22:50.97:443,51,0	1/1:4,18:22:47.98:417,48,0	1/1:3,25:28:65.98:573,66,0	1/1:0,9:9:24:208,24,0	1/1:7,19:26:26.80:462,27,0	1/1:4,24:29:79.04:659,79,0	1/1:3,13:16:26.99:234,27,0	1/1:1,17:18:41.98:364,42,0	0/0:15,0:15:36.06:0,36,378	0/0:14,0:14:32.10:0,32,329	1/1:0,24:24:59.99:521,60,0	1/1:0,18:18:53.73:455,54,0	1/1:2,11:13:29.98:260,30,0	1/1:0,13:13:35.99:313,36,0
chr10	64847377	.	ATTC	A	697.76	PASS	AB=0.974;AC=20;AF=0.357;AN=56;BaseQRankSum=10.427;DP=401;FS=3.993;HRun=0;HaplotypeScore=89.8232;InbreedingCoeff=-0.1783;MQ=70.84;MQ0=2;MQRankSum=-4.157;QD=2.81;ReadPosRankSum=8.442;VQSLOD=0.5425;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:32,0:31:4.45:4,0,152	0/1:2,0:2:6.17:6,0,13	0/0:24,0:12:6.15:0,6,115	0/0:20,0:14:21.58:0,22,183	0/0:19,0:19:38.33:0,38,418	0/1:20,0:21:28.91:95,0,29	0/0:16,0:16:16.09:0,16,211	0/1:22,0:21:4.60:5,0,237	0/0:11,0:11:29.91:0,30,385	0/1:12,0:12:1.52:2,0,70	0/1:8,0:8:14.02:31,0,14	0/1:10,0:10:40.53:41,0,41	0/0:7,0:7:18:0,18,255	0/1:13,0:12:36.15:36,0,62	0/1:9,0:9:16.10:16,0,71	0/1:16,2:18:94.06:102,0,94	0/1:17,1:18:45.58:142,0,46	1/1:11,1:11:17.52:78,18,0	0/0:17,0:16:16.05:0,16,279	0/0:15,0:15:9.70:0,10,183	0/1:13,0:13:29.70:30,0,46	0/1:9,0:9:3.79:4,0,71	0/0:10,0:10:23.80:0,24,252	0/0:14,0:14:36.34:0,36,450	0/1:9,1:11:2.19:69,0,2	0/1:16,0:16:34.26:34,0,182	0/1:15,0:16:16.23:146,0,16	1/1:6,0:6:2.90:16,3,0
chr10	64847380	.	CTTT	C	3218.75	PASS	AB=0.769;AC=40;AF=0.714;AN=56;BaseQRankSum=2.117;DP=390;FS=3.586;HRun=17;HaplotypeScore=81.5256;InbreedingCoeff=0.6618;MQ=66.95;MQ0=3;MQRankSum=-0.004;QD=11.54;ReadPosRankSum=6.739;VQSLOD=0.5940;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:10,2:29:42.91:289,43,0	1/1:1,1:2:2.95:31,3,0	0/0:23,0:10:11.92:0,12,119	0/0:18,0:12:13.56:0,14,132	0/0:11,0:20:12.78:0,13,257	1/1:7,11:20:41.54:404,42,0	0/1:9,4:15:10.97:54,0,11	1/1:16,5:21:4.48:141,4,0	0/0:13,0:16:35.68:0,36,399	1/1:5,7:12:17.71:175,18,0	1/1:3,4:8:0.24:68,0,0	1/1:5,4:9:11.83:121,12,0	0/0:7,0:8:15.01:0,15,202	1/1:7,6:12:14.20:121,14,0	1/1:5,2:7:8.88:88,9,0	1/1:9,10:19:21.44:242,21,0	1/1:6,11:17:32.91:336,33,0	1/1:5,7:11:23.62:230,24,0	1/1:10,2:14:11.47:96,11,0	0/1:11,2:14:8.44:52,0,8	1/1:3,8:12:20.94:202,21,0	1/1:4,5:9:5.76:61,6,0	0/0:10,0:11:19.47:0,19,204	0/0:14,0:15:30.46:0,30,372	1/1:3,4:9:4.76:157,5,0	1/1:8,7:16:20.66:198,21,0	1/1:6,10:16:15.79:296,16,0	1/1:0,1:2:5.93:48,6,0
chr10	64848162	.	GGAA	G	851.54	PASS	AB=0.842;AC=25;AF=0.481;AN=52;BaseQRankSum=4.018;DP=167;FS=9.355;HRun=0;HaplotypeScore=37.4940;InbreedingCoeff=0.1674;MQ=49.29;MQ0=10;MQRankSum=-4.235;QD=12.34;ReadPosRankSum=1.874;VQSLOD=1.6663;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,1:6:2.17:87,2,0	0/1:3,0:3:4.80:5,0,6	0/0:28,0:4:7.84:0,8,110	0/0:29,0:4:7.87:0,8,66	1/1:3,4:7:3.87:53,4,0	0/1:2,2:4:3.71:119,0,4	0/1:2,0:2:10.83:15,0,11	0/0:6,0:5:9.97:0,10,122	0/0:11,0:11:12.11:0,12,567	0/1:2,1:3:11.78:47,0,12	0/1:3,1:4:3.85:48,0,4	0/0:2,0:2:2.90:0,3,16	0/0:6,0:6:2.65:0,3,321	1/1:2,0:2:1.94:16,2,0	0/0:2,0:2:3.01:0,3,49	1/1:1,1:2:5.91:67,6,0	1/1:2,1:3:8.95:80,9,0	./.	0/0:2,0:2:2.50:0,2,9	0/1:1,1:2:4:4,0,13	1/1:7,4:9:15.71:155,16,0	0/1:4,1:5:7.53:72,0,8	0/1:4,0:4:38.63:39,0,77	0/0:11,0:9:15.05:0,15,333	1/1:1,1:2:5.99:73,6,0	0/1:5,1:6:6:60,0,6	./.	1/1:1,1:2:5.91:67,6,0
chr10	64848164	.	A	AGG	392.95	PASS	AB=0.776;AC=18;AF=0.346;AN=52;BaseQRankSum=4.209;DP=168;FS=0.000;HRun=3;HaplotypeScore=42.8971;InbreedingCoeff=-0.1320;MQ=49.14;MQ0=12;MQRankSum=-2.359;QD=6.14;ReadPosRankSum=-0.352;VQSLOD=-0.6845;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:5,2:6:7.01:59,0,7	0/1:1,2:3:9.25:29,0,9	0/0:29,0:4:10.79:0,11,117	0/0:30,0:4:4.20:0,4,58	0/0:6,1:7:0.05:0,0,6	0/1:3,1:4:21.01:35,0,21	0/0:2,0:2:5.91:0,6,39	0/0:7,0:6:17.63:0,18,114	0/0:10,0:10:27.97:0,28,423	0/1:2,1:3:1.81:58,0,2	0/0:2,2:4:4.86:0,5,21	1/1:1,0:1:3.01:30,3,0	0/1:5,1:6:7.96:8,0,226	0/1:2,0:2:13.56:14,0,14	0/0:2,0:2:3.01:0,3,43	0/1:1,1:2:4.56:21,0,5	0/1:2,1:3:10.42:26,0,10	./.	0/0:2,0:2:2.80:0,3,13	1/1:1,1:2:5.05:40,5,0	0/1:9,2:9:25.66:26,0,33	0/1:3,2:5:23.07:23,0,34	0/1:4,1:5:22.90:23,0,57	0/0:10,0:8:17.98:0,18,236	0/1:1,1:2:5.08:6,0,5	0/1:2,4:6:5.24:130,0,5	./.	0/1:2,0:2:1.30:6,0,1
chr10	64848185	.	GGGA	G	1928.87	PASS	AB=0.833;AC=39;AF=0.722;AN=54;BaseQRankSum=2.786;DP=319;FS=19.563;HRun=0;HaplotypeScore=52.9667;InbreedingCoeff=0.4369;MQ=45.76;MQ0=49;MQRankSum=-0.541;QD=9.23;ReadPosRankSum=-0.788;VQSLOD=0.5175;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:11:5.94:0,6,41	1/1:5,2:4:6.02:83,6,0	0/0:35,0:4:6.02:0,6,88	0/1:37,1:9:34.30:34,0,34	1/1:8,3:11:9.03:124,9,0	0/1:3,3:6:5.71:108,0,6	1/1:2,1:4:8.99:103,9,0	0/1:14,0:13:29.92:30,0,46	0/0:17,0:15:30.10:0,30,582	1/1:9,0:7:3.01:41,3,0	1/1:9,2:9:9.03:124,9,0	1/1:2,4:6:6.02:83,6,0	0/0:10,0:9:15.05:0,15,291	1/1:6,1:6:6.01:67,6,0	1/1:3,4:7:12.04:165,12,0	./.	1/1:7,3:9:12.02:148,12,0	1/1:1,1:1:3.01:41,3,0	1/1:7,2:7:3.01:41,3,0	1/1:5,1:5:2.98:41,3,0	1/1:16,3:13:12.04:164,12,0	1/1:7,2:5:6.02:83,6,0	0/0:12,0:9:12.04:0,12,237	0/0:15,1:13:12.04:0,12,237	1/1:4,1:3:3.01:41,3,0	1/1:5,6:10:18.06:248,18,0	1/1:0,2:2:3.01:41,3,0	1/1:8,4:10:21.07:289,21,0
chr10	64848594	.	CA	C	10886.07	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=8.986;DP=524;FS=0.715;HRun=2;HaplotypeScore=104.8674;InbreedingCoeff=0.9987;MQ=82.08;MQ0=0;MQRankSum=-7.382;QD=33.09;ReadPosRankSum=2.875;VQSLOD=4.6872;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:75.19:0,75,1069	1/1:0,11:11:24.08:311,24,0	0/0:13,0:12:29.10:0,29,364	0/0:23,0:23:32.11:0,32,681	0/0:14,0:14:39.12:0,39,562	1/1:0,19:19:51.17:661,51,0	1/1:1,21:22:57.19:739,57,0	0/0:30,0:30:78.24:0,78,1089	0/0:19,0:19:57.18:0,57,835	1/1:0,24:24:69.19:864,69,0	1/1:0,13:13:30.10:390,30,0	1/1:0,20:20:54.18:700,54,0	0/0:24,0:24:63.50:0,64,1017	1/1:0,16:16:45.14:579,45,0	1/1:1,30:31:78.25:1012,78,0	1/1:0,19:19:54.18:700,54,0	1/1:2,12:14:27.09:350,27,0	1/1:0,11:11:27.09:349,27,0	1/1:1,18:19:54.16:679,54,0	1/1:0,16:14:30.10:389,30,0	1/1:1,21:22:48.09:597,48,0	1/1:1,11:12:33.11:428,33,0	0/0:10,0:9:27.08:0,27,385	0/0:33,0:33:96.33:0,96,1438	1/1:0,11:11:30.10:389,30,0	1/1:0,19:19:57.19:739,57,0	1/1:0,16:16:35.70:466,36,0	1/1:0,14:14:42.14:545,42,0
chr10	64848632	.	ATCTCTCTCTCTCTC	A	5307.28	PASS	AC=30;AF=0.714;AN=42;BaseQRankSum=10.034;DP=448;FS=10.796;HRun=0;HaplotypeScore=227.0694;InbreedingCoeff=0.7790;MQ=71.56;MQ0=9;MQRankSum=-8.827;QD=26.02;ReadPosRankSum=3.479;VQSLOD=2.3700;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:8,0:21:5.24:21,5,0	./.	0/0:42,0:24:30.09:0,30,879	0/0:41,0:28:35.99:0,36,1445	./.	1/1:7,3:15:6.02:218,6,0	1/1:12,3:19:9.03:360,9,0	./.	0/0:25,0:25:60.21:0,60,3445	1/1:9,0:11:9.03:299,9,0	1/1:3,2:5:3.01:120,3,0	1/1:7,4:20:15.05:560,15,0	0/0:29,0:29:69.19:0,69,3699	1/1:9,4:16:6.02:240,6,0	1/1:4,7:20:18.06:721,18,0	1/1:3,5:14:15.04:507,15,0	1/1:8,1:8:3.01:97,3,0	1/1:6,0:7:6.02:180,6,0	1/1:2,1:7:15.05:539,15,0	1/1:4,1:7:6.02:218,6,0	./.	./.	0/0:11,0:10:24.08:0,24,1411	0/0:36,0:37:69.22:0,69,4100	./.	1/1:9,2:16:21.07:708,21,0	1/1:5,4:12:15.05:519,15,0	./.
chr10	64848886	.	CTA	C	7309.95	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=6.299;DP=364;FS=17.780;HRun=0;HaplotypeScore=60.3909;InbreedingCoeff=0.9136;MQ=72.08;MQ0=2;MQRankSum=-0.969;QD=25.03;ReadPosRankSum=0.447;VQSLOD=3.4499;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:29,1:28:45.08:303,45,0	1/1:4,1:5:12.02:125,12,0	0/0:11,0:10:20.84:0,21,208	0/0:11,0:8:3.08:0,3,84	1/1:3,5:8:24.06:304,24,0	1/1:2,6:8:18.06:251,18,0	1/1:1,10:11:18.06:250,18,0	1/1:6,15:21:38.91:358,39,0	0/0:14,0:14:36.12:0,36,607	1/1:4,13:16:40.32:461,40,0	1/1:3,12:15:32.92:382,33,0	1/1:1,9:10:17.79:222,18,0	0/0:10,0:10:27.04:0,27,376	1/1:2,5:7:15.01:187,15,0	1/1:2,14:16:27.05:355,27,0	1/1:1,12:13:33.11:461,33,0	1/1:1,12:13:30.10:418,30,0	1/1:2,18:20:38.86:513,39,0	1/1:1,12:12:36:434,36,0	1/1:5,15:20:53.68:570,54,0	1/1:1,5:6:6.02:84,6,0	1/1:1,8:9:17.83:140,18,0	0/0:14,0:14:42.08:0,42,589	0/0:12,0:12:30.08:0,30,479	1/1:2,9:11:24.07:323,24,0	1/1:1,23:24:68.75:730,69,0	1/1:1,11:12:24.04:312,24,0	1/1:0,3:3:9.03:125,9,0
chr10	64848889	.	TATA	T	2663.31	PASS	AB=0.975;AC=42;AF=0.750;AN=56;BaseQRankSum=5.197;DP=359;FS=16.883;HRun=0;HaplotypeScore=82.8080;InbreedingCoeff=0.6971;MQ=72.56;MQ0=3;MQRankSum=0.397;QD=9.31;ReadPosRankSum=2.728;VQSLOD=1.8406;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:35,0:33:48.95:49,0,78	1/1:5,0:5:10.82:116,11,0	0/0:12,0:11:26.57:0,27,311	0/0:11,0:7:7.05:0,7,97	1/1:9,0:9:18.55:116,19,0	1/1:7,0:7:15.20:67,15,0	1/1:11,0:11:15.20:66,15,0	0/1:18,1:19:6.54:246,0,7	0/0:13,0:13:36.12:0,36,790	1/1:16,0:16:23.26:198,23,0	1/1:12,1:13:30.48:192,30,0	1/1:10,0:10:12.27:55,12,0	0/0:9,0:9:27.06:0,27,483	1/1:5,0:5:13.68:66,14,0	1/1:15,0:15:25.64:115,26,0	1/1:13,0:13:29.46:126,29,0	1/1:12,1:13:26.78:114,27,0	1/1:19,0:19:30.77:134,31,0	1/1:13,1:13:4.56:153,5,0	1/1:17,2:19:46.74:328,47,0	1/1:5,0:5:5.36:23,5,0	1/1:8,0:9:0.93:90,1,0	0/0:16,0:16:48.10:0,48,802	0/0:12,0:12:33.09:0,33,646	1/1:9,1:10:21.76:133,22,0	1/1:24,0:24:36.81:333,37,0	1/1:12,0:12:21.71:100,22,0	1/1:3,0:3:8.04:34,8,0
chr10	64848890	.	AT	A	4956.66	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=7.698;DP=375;FS=20.030;HRun=1;HaplotypeScore=69.0677;InbreedingCoeff=0.9275;MQ=70.79;MQ0=3;MQRankSum=-1.391;QD=16.52;ReadPosRankSum=1.479;VQSLOD=3.7261;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,19:32:80.49:880,80,0	1/1:5,0:5:12.43:99,12,0	0/0:12,0:11:20.01:0,20,194	0/0:11,0:6:6.76:0,7,83	1/1:9,0:9:25.05:177,25,0	1/1:8,0:8:18.27:121,18,0	1/1:12,0:12:18.27:120,18,0	1/1:17,2:19:20.31:266,20,0	0/0:14,0:14:36.09:0,36,464	1/1:16,0:16:42.08:311,42,0	1/1:13,0:13:33.13:224,33,0	1/1:10,1:11:18.73:143,19,0	0/0:9,0:9:27.04:0,27,305	1/1:7,0:7:14.84:100,15,0	1/1:17,0:17:24.01:175,24,0	1/1:13,0:13:32.64:220,33,0	1/1:13,0:13:29.66:199,30,0	1/1:18,1:19:38.61:280,39,0	1/1:14,0:13:16.64:212,17,0	1/1:19,1:20:53.52:391,54,0	1/1:5,0:5:5.93:40,6,0	1/1:10,0:10:17.79:119,18,0	0/0:17,0:17:48:0,48,514	0/0:12,0:12:33.06:0,33,393	1/1:13,0:13:23.76:163,24,0	1/1:25,1:26:51.06:498,51,0	1/1:12,0:12:23.59:159,24,0	1/1:4,0:4:8.90:60,9,0
chr10	64849003	.	CA	C	2882.27	PASS	AB=0.760;AC=41;AF=0.732;AN=56;BaseQRankSum=-3.135;DP=493;FS=1.103;HRun=11;HaplotypeScore=53.6539;InbreedingCoeff=0.5643;MQ=51.34;MQ0=31;MQRankSum=-0.560;QD=9.01;ReadPosRankSum=3.802;VQSLOD=2.1471;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,14:20:14.31:241,14,0	1/1:2,5:6:5.98:49,6,0	0/0:55,0:14:29.37:0,29,216	0/0:46,0:7:12.22:0,12,67	0/1:6,12:17:12.57:215,0,13	1/1:5,8:9:19.55:138,20,0	1/1:4,6:8:2.72:64,3,0	0/0:16,0:24:48.27:0,48,282	0/0:10,0:10:23.89:0,24,234	1/1:8,19:23:23.63:319,24,0	1/1:7,9:15:7.99:204,8,0	1/1:7,7:16:12.60:180,13,0	0/0:16,0:15:22.10:0,22,260	1/1:3,6:8:11.97:96,12,0	1/1:3,10:9:11.94:92,12,0	1/1:6,6:8:0.11:61,0,0	1/1:4,16:18:32.95:269,33,0	0/1:4,4:8:13.35:104,0,13	1/1:13,8:17:6.25:232,6,0	1/1:6,8:10:11.45:102,11,0	1/1:1,4:4:5.99:49,6,0	1/1:3,5:7:5.83:39,6,0	0/0:10,1:11:29.91:0,30,301	0/1:12,0:10:10.29:10,0,88	1/1:10,10:18:24.08:239,24,0	1/1:7,12:16:25.89:206,26,0	1/1:4,17:14:14.74:108,15,0	1/1:3,4:6:5.99:49,6,0
chr10	64850781	.	TTATC	T	6982.09	PASS	AB=0.870;AC=33;AF=0.660;AN=50;BaseQRankSum=10.931;DP=549;FS=1.007;HRun=0;HaplotypeScore=94.1661;InbreedingCoeff=0.8984;MQ=60.04;MQ0=1;MQRankSum=0.670;QD=19.95;ReadPosRankSum=1.378;VQSLOD=4.2981;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,19:32:48.12:704,48,0	1/1:1,8:9:18.06:281,18,0	./.	./.	1/1:8,15:23:39.09:582,39,0	1/1:10,11:21:27.09:421,27,0	1/1:7,3:10:12.04:187,12,0	0/0:24,0:30:30.84:0,31,381	0/0:17,0:17:18.06:0,18,425	1/1:16,14:30:42.14:649,42,0	1/1:10,12:22:24:321,24,0	1/1:5,11:16:24.55:375,25,0	0/0:13,0:13:27.09:0,27,602	1/1:2,9:11:21.07:328,21,0	1/1:8,14:22:24.08:375,24,0	0/1:17,3:20:63.50:64,0,484	1/1:13,15:29:27.09:421,27,0	1/1:4,14:18:33.11:515,33,0	0/0:18,0:18:18.06:0,18,425	0/0:23,0:23:36.11:0,36,804	1/1:5,9:14:24.08:375,24,0	./.	0/0:26,0:26:33.07:0,33,696	0/0:12,0:12:30.10:0,30,704	1/1:11,15:26:30.10:468,30,0	1/1:11,12:23:36.12:542,36,0	0/0:27,0:27:60.16:0,60,1242	1/1:14,9:23:24.08:375,24,0
chr10	64851977	.	GCACACA	G	9518.76	PASS	AB=0.833;AC=42;AF=0.750;AN=56;BaseQRankSum=11.870;DP=720;FS=2.514;HRun=0;HaplotypeScore=238.9002;InbreedingCoeff=0.7456;MQ=47.79;MQ0=9;MQRankSum=-7.995;QD=18.27;ReadPosRankSum=-0.092;VQSLOD=3.9987;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:52,0:50:30.49:30,0,302	1/1:2,2:5:12.04:199,12,0	0/0:39,0:20:6.02:0,6,138	0/0:42,0:25:21.07:0,21,568	1/1:14,0:31:36.47:308,36,0	1/1:11,5:21:20.65:304,21,0	1/1:10,4:16:21.05:292,21,0	0/1:15,15:30:99:576,0,125	0/0:21,0:24:48.16:0,48,1180	1/1:17,10:36:72.22:1082,72,0	1/1:7,10:22:15.52:211,16,0	1/1:11,12:23:42.11:687,42,0	0/0:32,0:32:75.26:0,75,2204	1/1:6,4:15:24.06:297,24,0	1/1:8,9:21:39.11:604,39,0	1/1:6,9:15:27.09:488,27,0	1/1:16,8:27:32.65:468,33,0	1/1:18,1:19:15.03:228,15,0	1/1:19,4:27:30.09:484,30,0	1/1:4,9:15:3.47:59,3,0	1/1:19,3:27:15.02:188,15,0	1/1:8,11:25:32.56:482,33,0	0/0:25,0:25:63.22:0,63,1854	0/0:35,0:37:94.55:0,95,2596	1/1:8,8:18:24.08:401,24,0	1/1:13,13:32:63.19:1045,63,0	1/1:10,18:31:48.16:849,48,0	1/1:0,1:6:18.05:236,18,0
chr10	64852002	.	CAGAGAA	C	5776.40	PASS	AB=0.944;AC=34;AF=0.607;AN=56;BaseQRankSum=12.548;DP=697;FS=0.793;HRun=0;HaplotypeScore=253.0586;InbreedingCoeff=0.4299;MQ=53.75;MQ0=10;MQRankSum=-10.397;QD=11.86;ReadPosRankSum=6.193;VQSLOD=3.2625;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:9,35:44:1.62:337,0,2	1/1:4,0:4:6.31:123,6,0	0/0:29,0:13:24.03:0,24,442	0/0:27,0:17:35.33:0,35,542	0/0:26,0:26:51.89:0,52,1035	1/1:17,0:17:5.98:195,6,0	1/1:20,0:20:6.93:141,7,0	0/1:38,0:38:66.81:67,0,513	0/0:24,0:24:63.15:0,63,1669	1/1:32,0:32:23.29:695,23,0	0/1:17,0:17:2.97:41,0,3	1/1:21,0:20:28.39:453,28,0	0/0:34,0:34:96.01:0,96,2646	0/1:18,0:18:7.29:45,0,7	1/1:27,0:26:4.73:352,5,0	0/1:23,0:21:35.74:339,0,36	1/1:30,0:30:18.46:307,18,0	0/1:16,0:15:1.32:123,0,1	1/1:20,0:18:19.42:376,19,0	1/1:23,0:23:1.74:46,2,0	0/1:25,0:23:4.80:27,0,5	1/1:22,0:22:6.25:232,6,0	0/0:31,0:31:81.70:0,82,2263	0/0:39,0:39:99:0,110,2939	1/1:21,0:21:13.07:278,13,0	1/1:32,0:32:58.56:922,59,0	1/1:27,0:27:29.43:589,29,0	0/1:9,0:9:2.60:89,0,3
chr10	64852004	.	GAGAA	G	7269.97	PASS	AB=0.718;AC=36;AF=0.643;AN=56;BaseQRankSum=11.555;DP=701;FS=0.000;HRun=0;HaplotypeScore=228.6507;InbreedingCoeff=0.5073;MQ=55.04;MQ0=9;MQRankSum=-9.602;QD=14.90;ReadPosRankSum=5.595;VQSLOD=3.9623;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:41,0:40:1.63:203,0,2	1/1:3,2:5:9.85:203,10,0	0/0:31,0:15:30.18:0,30,505	0/0:27,0:17:37.86:0,38,531	0/0:26,0:26:59.31:0,59,843	1/1:4,13:17:5.68:240,6,0	1/1:3,18:21:6.96:169,7,0	0/1:39,0:38:99:104,0,263	0/0:25,0:25:66.13:0,66,1383	1/1:11,22:33:56.62:1098,57,0	0/1:4,13:17:3.22:44,0,3	1/1:3,18:20:33.89:536,34,0	0/0:34,0:34:96.01:0,96,2133	0/1:6,12:18:8.54:53,0,9	1/1:6,21:26:5.15:378,5,0	0/1:2,22:22:35.63:381,0,36	1/1:3,27:30:21.79:392,22,0	1/1:2,17:18:7.05:156,7,0	1/1:6,14:18:35.50:603,35,0	1/1:4,19:23:4.13:66,4,0	0/1:8,13:20:4.57:45,0,5	1/1:5,17:22:6.79:246,7,0	0/0:31,0:31:85.09:0,85,1888	0/0:39,0:39:99:0,113,2364	1/1:2,20:22:13.51:300,14,0	1/1:6,25:31:63.58:1254,64,0	1/1:3,25:28:31.89:670,32,0	1/1:4,5:9:8.53:130,9,0
chr10	64852122	.	A	AAAAC	19703.97	PASS	AB=0.631;AC=42;AF=0.750;AN=56;BaseQRankSum=-7.793;DP=720;FS=1.021;HRun=0;HaplotypeScore=110.2437;InbreedingCoeff=0.8293;MQ=67.86;MQ0=1;MQRankSum=0.035;QD=34.57;ReadPosRankSum=0.287;VQSLOD=5.0132;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:19,30:51:27.96:1676,28,0	1/1:4,8:12:24.08:574,24,0	0/0:34,0:27:11.95:0,12,147	0/0:27,0:23:15.61:0,16,270	1/1:18,0:36:45.15:694,45,0	1/1:9,15:25:36.12:861,36,0	1/1:11,11:22:30.10:709,30,0	1/1:28,0:28:24.07:432,24,0	0/0:17,0:17:27.05:0,27,400	1/1:16,19:38:66.23:1477,66,0	1/1:11,14:26:39.09:848,39,0	1/1:8,15:22:33.11:790,33,0	0/0:27,0:27:54.17:0,54,834	1/1:6,9:16:21.07:502,21,0	1/1:11,20:33:60.21:1435,60,0	0/1:12,12:22:20.68:547,0,21	1/1:9,17:26:39.13:901,39,0	1/1:6,11:17:21.07:503,21,0	1/1:14,10:24:33.11:751,33,0	1/1:15,15:34:54.18:1174,54,0	1/1:10,18:28:45.15:1077,45,0	1/1:6,18:24:54.18:1260,54,0	0/0:24,0:26:45.14:0,45,677	0/0:19,0:19:43.94:0,44,650	0/1:7,15:22:2.61:960,0,3	1/1:12,16:28:48.14:1100,48,0	1/1:10,14:24:33.11:788,33,0	1/1:0,9:9:27.09:646,27,0
chr10	64852435	.	AG	A	933.55	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.695;DP=620;FS=3.274;HRun=5;HaplotypeScore=63.2568;InbreedingCoeff=0.9889;MQ=78.25;MQ0=1;MQRankSum=0.422;QD=29.17;ReadPosRankSum=-3.308;VQSLOD=2.6324;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,129,1692	0/0:8,0:8:24.08:0,24,324	0/0:17,0:15:42.12:0,42,540	0/0:24,0:23:44.35:0,44,625	0/0:25,0:25:66.19:0,66,862	0/0:21,0:21:63.12:0,63,819	0/0:18,0:18:51.15:0,51,668	1/1:1,31:32:93.23:1028,93,0	0/0:17,0:17:48.16:0,48,653	0/0:29,0:29:84.27:0,84,1131	0/0:18,0:18:54.15:0,54,701	0/0:20,0:20:57.18:0,57,762	0/0:25,0:25:69.23:0,69,936	0/0:24,0:24:63.18:0,63,828	0/0:23,0:23:69.22:0,69,927	0/0:21,0:20:63.21:0,63,860	0/0:32,0:32:81.22:0,81,1056	0/0:17,0:17:48.16:0,48,655	0/0:26,0:26:60.16:0,60,764	0/0:21,0:21:63.18:0,63,824	0/0:32,0:32:96.32:0,96,1311	0/0:15,0:15:42.13:0,42,557	0/0:24,0:24:69.22:0,69,925	0/0:26,0:26:75.24:0,75,1002	0/0:10,0:10:27.08:0,27,353	0/0:22,0:22:63.13:0,63,795	0/0:22,0:22:63.06:0,63,785	0/0:6,0:6:17.99:0,18,179
chr10	64853359	.	CACAT	C	952.31	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.019;DP=920;FS=0.776;HRun=0;HaplotypeScore=155.5976;InbreedingCoeff=0.9999;MQ=56.93;MQ0=17;MQRankSum=-3.207;QD=34.01;ReadPosRankSum=-4.551;VQSLOD=2.3203;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:88.25:0,88,2324	0/0:16,0:16:45.15:0,45,1168	0/0:56,0:29:71.05:0,71,1610	0/0:40,0:24:52.61:0,53,1299	0/0:34,0:34:99:0,99,2533	0/0:37,0:36:99:0,105,2570	0/0:17,0:16:42.14:0,42,1081	1/1:5,23:27:65.70:1047,66,0	0/0:26,0:26:72.25:0,72,1870	0/0:33,0:33:93.32:0,93,2377	0/0:27,0:27:78.27:0,78,2001	0/0:36,0:36:99:0,99,2558	0/0:34,0:34:99:0,99,2489	0/0:49,0:49:99:0,138,3524	0/0:43,0:43:99:0,114,2956	0/0:39,0:39:99:0,105,2576	0/0:29,0:29:61.43:0,61,1573	0/0:30,0:30:81.28:0,81,2022	0/0:22,0:20:48.14:0,48,1159	0/0:45,0:45:99:0,126,3143	0/0:62,0:61:99:0,160,3853	0/0:26,0:26:75.26:0,75,1923	0/0:26,0:26:72.25:0,72,1837	0/0:27,0:27:50.87:0,51,1256	0/0:25,0:25:69.24:0,69,1661	0/0:27,0:27:78.26:0,78,1934	0/0:29,0:29:84.27:0,84,2091	0/0:21,0:21:57.20:0,57,1438
chr10	64854004	.	A	AGG	1263.93	PASS	AB=0.910;AC=19;AF=0.339;AN=56;BaseQRankSum=6.855;DP=607;FS=30.190;HRun=0;HaplotypeScore=103.3994;InbreedingCoeff=-0.5102;MQ=57.48;MQ0=24;MQRankSum=-1.536;QD=4.20;ReadPosRankSum=0.535;VQSLOD=0.3917;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:32:24.75:0,25,214	0/1:8,0:8:24.76:73,0,25	0/0:74,0:17:31.18:0,31,245	0/0:65,0:10:18.82:0,19,130	0/0:32,0:32:74.08:0,74,782	0/1:19,2:20:99:104,0,132	0/1:15,2:18:78.19:86,0,78	0/0:33,0:32:88.10:0,88,769	0/0:15,0:15:36.12:0,36,525	0/1:24,1:23:69.33:69,0,187	0/1:9,7:16:86.30:134,0,86	0/1:11,1:12:61.76:62,0,65	0/0:11,0:10:16.66:0,17,310	0/1:9,0:8:27.60:42,0,28	0/1:17,3:19:57.27:57,0,110	0/1:11,1:12:56.19:56,0,67	0/1:19,1:19:67.42:89,0,67	0/1:12,2:14:39.95:40,0,88	0/1:17,0:15:32.40:32,0,133	0/1:24,0:22:63.36:63,0,143	0/1:3,1:4:11.07:11,0,33	0/1:13,2:15:68.89:112,0,69	0/0:14,0:11:27.07:0,27,353	0/0:29,0:29:68.54:0,69,957	0/1:12,2:13:19.55:68,0,20	0/1:23,2:25:99:124,0,320	0/1:14,1:15:56.57:93,0,57	0/1:10,2:9:43.04:110,0,43
chr10	64854005	.	AAGG	A	1389.70	PASS	AB=0.991;AC=21;AF=0.375;AN=56;BaseQRankSum=7.002;DP=609;FS=6.520;HRun=0;HaplotypeScore=107.6965;InbreedingCoeff=-0.3882;MQ=58.42;MQ0=24;MQRankSum=-0.213;QD=4.10;ReadPosRankSum=-0.047;VQSLOD=1.8223;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:30,3:32:19.41:322,19,0	0/0:8,0:8:10.55:0,11,93	0/0:73,0:17:14.76:0,15,221	0/0:66,0:12:3.57:0,4,67	0/0:31,0:31:35.84:0,36,434	0/1:21,0:20:88.45:88,0,102	0/1:18,0:18:57.57:58,0,59	0/0:34,0:33:18.24:0,18,401	0/0:15,0:15:35.74:0,36,482	0/1:24,0:23:94.93:95,0,177	0/1:16,0:16:40.26:40,0,96	0/1:12,0:12:1.17:1,0,66	0/1:11,0:10:0.41:0,0,250	0/1:9,0:8:3.34:55,0,3	0/1:21,0:20:99:121,0,103	0/1:13,0:13:15.55:123,0,16	0/1:19,1:19:56.69:68,0,57	0/1:14,0:14:49.93:50,0,68	0/1:17,0:15:99:150,0,107	0/1:23,0:22:45.21:45,0,138	0/1:4,0:4:23.85:67,0,24	0/1:14,0:15:54.40:54,0,81	0/0:14,0:11:29.92:0,30,396	0/0:29,0:29:59.98:0,60,814	0/1:14,0:13:19.82:20,0,26	0/1:24,0:25:22.86:23,0,230	0/1:15,0:15:25.91:73,0,26	0/1:12,0:9:38.70:94,0,39
chr10	64854008	.	G	GAAAAA	7789.06	PASS	AB=1.000;AC=44;AF=0.786;AN=56;BaseQRankSum=0.735;DP=658;FS=2.605;HRun=13;HaplotypeScore=132.8090;InbreedingCoeff=0.7777;MQ=58.05;MQ0=25;MQRankSum=-4.743;QD=16.03;ReadPosRankSum=-0.668;VQSLOD=2.3992;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:33:47.87:383,48,0	1/1:8,1:9:17.88:211,18,0	0/0:73,0:17:16.30:0,16,224	0/1:67,0:14:4.28:4,0,65	1/1:13,0:28:24.29:187,24,0	1/1:20,0:21:35.75:488,36,0	1/1:8,0:19:24.54:348,25,0	0/0:19,0:38:38.78:0,39,202	0/0:14,0:16:20.71:0,21,304	1/1:16,2:31:53.82:839,54,0	1/1:17,0:17:29.77:452,30,0	1/1:8,0:13:12.04:204,12,0	0/1:12,0:11:44.62:45,0,159	1/1:6,0:8:15.94:244,16,0	1/1:19,0:21:41.37:506,41,0	1/1:13,0:14:21.07:342,21,0	1/1:10,0:19:15.04:232,15,0	1/1:5,0:16:21.07:295,21,0	1/1:12,5:20:38.25:503,38,0	1/1:11,1:24:26.71:342,27,0	1/1:4,0:4:6.02:85,6,0	1/1:8,0:18:33.04:485,33,0	0/0:13,0:11:20.81:0,21,283	0/0:28,0:28:19.29:0,19,401	1/1:9,6:17:16.78:252,17,0	1/1:16,0:31:50.54:662,51,0	1/1:14,0:17:30.09:419,30,0	1/1:14,0:11:18.51:261,19,0
chr10	64856284	.	AT	A	4176.70	PASS	AB=0.667;AC=41;AF=0.732;AN=56;BaseQRankSum=1.419;DP=445;FS=3.119;HRun=11;HaplotypeScore=57.3662;InbreedingCoeff=0.8084;MQ=72.99;MQ0=3;MQRankSum=-1.270;QD=12.70;ReadPosRankSum=4.394;VQSLOD=3.6174;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,0:38:28.50:83,28,0	1/1:3,2:5:5.98:49,6,0	0/0:23,0:18:16.35:0,16,231	0/0:18,0:11:9.18:0,9,102	0/0:20,0:20:42.97:0,43,436	1/1:11,7:19:39.40:295,39,0	1/1:1,12:13:20.96:170,21,0	1/1:16,0:26:37.90:107,38,0	0/0:12,0:12:23.92:0,24,232	1/1:11,4:15:23.95:197,24,0	1/1:12,6:18:35.77:293,36,0	1/1:4,3:7:2.97:25,3,0	0/0:13,0:13:24.04:0,24,243	1/1:6,2:8:20.97:172,21,0	1/1:1,10:12:14.98:123,15,0	1/1:6,6:11:29.95:246,30,0	1/1:12,10:22:50.89:418,51,0	1/1:7,9:16:32.93:271,33,0	1/1:2,17:19:41.92:345,42,0	1/1:9,9:16:29.92:241,30,0	1/1:9,4:13:28.97:222,29,0	0/1:2,2:4:18.63:19,0,26	0/0:9,0:8:9.01:0,9,89	0/0:21,0:21:47.95:0,48,459	1/1:5,8:14:34.97:273,35,0	1/1:8,7:15:29.93:246,30,0	1/1:15,7:22:35.79:295,36,0	1/1:4,5:9:2.96:87,3,0
chr10	64856386	.	AT	A	5174.47	PASS	AB=0.957;AC=43;AF=0.768;AN=56;BaseQRankSum=9.146;DP=484;FS=2.877;HRun=11;HaplotypeScore=71.1392;InbreedingCoeff=0.7529;MQ=58.81;MQ0=44;MQRankSum=-0.069;QD=13.17;ReadPosRankSum=1.012;VQSLOD=5.0890;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:35:84.99:0,85,923	1/1:2,2:4:5.98:49,6,0	0/1:15,0:5:1.90:2,0,47	0/0:12,1:6:8.60:0,9,63	0/1:17,1:18:1.13:1,0,282	1/1:2,14:16:37.95:295,38,0	1/1:2,13:14:32.96:271,33,0	1/1:9,15:21:41.95:356,42,0	0/0:10,0:7:15.02:0,15,152	1/1:7,14:17:41.30:325,41,0	1/1:6,13:17:32.84:262,33,0	1/1:4,10:11:29.19:228,29,0	0/1:11,1:11:0.58:1,0,200	1/1:5,10:15:29.96:246,30,0	1/1:9,14:21:34.40:260,34,0	1/1:4,7:8:20.97:172,21,0	1/1:6,21:27:61:480,61,0	1/1:9,15:23:41.94:345,42,0	1/1:5,18:23:53.92:441,54,0	1/1:10,13:21:35.92:295,36,0	1/1:5,6:8:14.98:123,15,0	1/1:5,1:6:2.83:24,3,0	0/0:13,0:11:21.05:0,21,220	0/0:18,1:18:45.06:0,45,467	1/1:7,11:17:29.33:229,29,0	1/1:8,13:20:12.08:294,12,0	1/1:5,18:22:52.96:425,53,0	1/1:3,2:5:5.99:49,6,0
chr10	64857140	.	ACTGGTCC	A	1087.47	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.229;DP=497;FS=11.520;HRun=0;HaplotypeScore=110.2279;InbreedingCoeff=0.9357;MQ=72.11;MQ0=0;MQRankSum=-6.211;QD=32.95;ReadPosRankSum=-0.418;VQSLOD=2.7941;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,26:33:47.69:1182,48,0	0/0:11,0:11:30.10:0,30,1080	0/0:19,0:19:39.12:0,39,1247	0/0:9,0:8:18.06:0,18,664	0/0:25,0:25:69.24:0,69,2651	0/0:12,0:12:33.10:0,33,1172	0/0:34,0:34:99:0,102,3856	0/0:25,0:25:51.15:0,51,1449	0/0:18,0:18:48.16:0,48,1805	0/0:17,0:17:45.15:0,45,1734	0/0:17,0:17:49.41:0,49,1811	0/0:17,0:17:51.18:0,51,1958	0/0:13,0:13:39.13:0,39,1507	0/0:17,0:17:51.18:0,51,1934	0/0:15,0:15:45.15:0,45,1739	0/0:12,0:12:36.12:0,36,1392	0/0:33,0:33:84.26:0,84,3065	0/0:29,0:29:81.26:0,81,2990	0/0:16,0:16:36.12:0,36,1345	0/0:22,0:22:66.23:0,66,2534	0/0:18,0:18:54.19:0,54,2079	0/0:9,0:9:27.09:0,27,1044	0/0:13,0:13:36.11:0,36,1281	0/0:16,0:16:48.16:0,48,1830	0/0:11,0:11:33.11:0,33,1276	0/0:15,0:15:36.12:0,36,1367	0/0:18,0:18:45.15:0,45,1709	0/0:3,0:3:9.03:0,9,348
chr10	64857434	.	ACACACCC	A	1219.05	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-2.294;DP=563;FS=0.000;HRun=0;HaplotypeScore=199.6189;InbreedingCoeff=0.9821;MQ=75.12;MQ0=0;MQRankSum=-5.496;QD=38.10;ReadPosRankSum=1.094;VQSLOD=3.1944;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,30:32:51.17:1314,51,0	0/0:12,0:12:36.12:0,36,494	0/0:31,0:28:65.18:0,65,1771	0/0:16,0:15:30.52:0,31,673	0/0:17,0:17:48.14:0,48,1195	0/0:21,0:21:63.20:0,63,939	0/0:18,0:18:54.18:0,54,893	0/0:20,0:20:29.60:0,30,575	0/0:13,0:13:39.12:0,39,1212	0/0:28,0:28:78.25:0,78,1160	0/0:21,0:21:60.17:0,60,866	0/0:25,0:25:69.21:0,69,1069	0/0:10,0:10:27.09:0,27,771	0/0:19,0:19:54.17:0,54,789	0/0:25,0:25:75.25:0,75,1151	0/0:23,0:23:66.21:0,66,937	0/0:36,0:36:99:0,105,1517	0/0:14,0:14:36.12:0,36,518	0/0:19,0:19:57.18:0,57,866	0/0:25,0:25:72.23:0,72,1023	0/0:20,0:20:45.15:0,45,675	0/0:17,0:17:51.17:0,51,729	0/0:7,0:7:15.05:0,15,425	0/0:18,0:18:51.18:0,51,1692	0/0:19,0:19:54.17:0,54,758	0/0:16,0:16:45.15:0,45,647	0/0:26,0:26:66.20:0,66,985	0/0:15,0:15:42.14:0,42,585
chr10	64857436	.	ACAC	A	733.80	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=0.829;DP=562;FS=1.439;HRun=0;HaplotypeScore=158.7342;InbreedingCoeff=0.9887;MQ=74.53;MQ0=0;MQRankSum=-4.057;QD=15.29;ReadPosRankSum=-1.818;VQSLOD=3.4028;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:30:46:345,46,0	0/0:12,0:12:26.80:0,27,100	0/0:32,0:29:52.49:0,52,830	0/0:14,0:13:26.76:0,27,336	0/0:16,0:16:43.50:0,44,373	0/0:22,0:22:48.68:0,49,215	0/0:18,0:18:45.93:0,46,246	1/1:12,6:18:24.66:510,25,0	0/0:13,0:13:39.05:0,39,622	0/0:28,0:28:61.76:0,62,313	0/0:20,0:20:42.99:0,43,165	0/0:25,0:25:52.01:0,52,235	0/0:10,0:10:27.02:0,27,357	0/0:19,0:19:40.50:0,40,189	0/0:25,0:25:60.05:0,60,260	0/0:24,0:24:49.18:0,49,189	0/0:36,0:36:79.27:0,79,376	0/0:15,0:15:32.28:0,32,124	0/0:20,0:20:45.21:0,45,240	0/0:24,0:24:51.19:0,51,177	0/0:21,0:21:36.48:0,36,167	0/0:18,0:18:41.37:0,41,159	0/0:7,0:7:15.02:0,15,211	0/0:19,0:19:54.08:0,54,821	0/0:19,0:19:42.61:0,43,177	0/0:16,0:16:38.05:0,38,173	0/0:26,0:26:46.22:0,46,197	0/0:15,0:15:31.64:0,32,114
chr10	64857438	.	ACC	A	10053.37	PASS	AB=0.909;AC=41;AF=0.732;AN=56;BaseQRankSum=2.970;DP=556;FS=8.922;HRun=11;HaplotypeScore=114.6408;InbreedingCoeff=0.8842;MQ=73.30;MQ0=0;MQRankSum=-1.635;QD=22.64;ReadPosRankSum=5.986;VQSLOD=3.4488;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:30:34.90:202,35,0	1/1:1,11:12:33.03:351,33,0	0/0:28,0:26:19.05:0,19,373	0/0:16,0:15:13.75:0,14,147	0/0:5,0:16:27.63:0,28,102	1/1:4,17:21:53.93:549,54,0	1/1:8,11:19:41.78:408,42,0	0/1:18,0:20:17.32:58,0,17	0/0:14,0:14:27.08:0,27,394	1/1:4,23:27:65.79:663,66,0	1/1:2,18:20:48.10:511,48,0	1/1:4,20:24:53.92:559,54,0	0/0:12,0:12:17.96:0,18,148	1/1:4,14:18:39.03:415,39,0	1/1:6,19:25:60.03:630,60,0	1/1:2,21:23:57.09:606,57,0	1/1:10,24:34:80.82:812,81,0	1/1:3,12:15:35.99:360,36,0	1/1:4,15:19:44.82:459,45,0	1/1:0,23:23:69.11:720,69,0	1/1:4,16:20:33:351,33,0	1/1:2,16:18:50.96:517,51,0	0/0:7,0:7:6.02:0,6,92	0/0:16,0:18:41.08:0,41,506	1/1:4,15:19:47.96:484,48,0	1/1:4,12:16:39.04:405,39,0	1/1:2,24:26:56.92:578,57,0	1/1:1,14:15:39.10:415,39,0
chr10	64858996	.	AC	A	802.17	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.212;DP=459;FS=13.527;HRun=8;HaplotypeScore=57.0849;InbreedingCoeff=0.8804;MQ=79.14;MQ0=0;MQRankSum=-0.600;QD=18.23;ReadPosRankSum=2.736;VQSLOD=2.3468;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,40:44:93.15:897,93,0	0/0:8,0:8:14.99:0,15,153	0/0:23,0:22:37.13:0,37,528	0/0:11,0:11:17.52:0,18,170	0/0:21,0:21:48.91:0,49,294	0/0:13,0:13:36.10:0,36,424	0/0:21,0:21:54.08:0,54,617	0/0:25,0:25:50.63:0,51,371	0/0:14,0:14:42.13:0,42,507	0/0:7,0:7:15.05:0,15,181	0/0:6,0:6:15.05:0,15,181	0/0:17,0:17:48.15:0,48,579	0/0:20,0:20:60.16:0,60,699	0/0:18,0:18:50.85:0,51,616	0/0:12,1:13:10.15:0,10,406	0/0:13,0:13:36.10:0,36,418	0/0:35,0:35:99:0,99,1150	0/0:22,0:22:57.17:0,57,687	0/0:14,0:14:18.04:0,18,207	0/0:11,0:11:30.09:0,30,362	0/0:28,0:29:84.04:0,84,950	0/0:7,0:7:21.06:0,21,250	0/0:13,0:13:30.09:0,30,362	0/0:14,0:14:42.13:0,42,507	0/0:8,0:8:24.07:0,24,289	0/0:7,0:7:15.05:0,15,181	0/0:15,0:15:42.13:0,42,504	0/0:10,0:10:27.08:0,27,325
chr10	64859496	.	T	TG	19830.78	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=3.061;DP=665;FS=9.866;HRun=1;HaplotypeScore=95.1210;InbreedingCoeff=0.9689;MQ=76.39;MQ0=1;MQRankSum=-4.939;QD=37.77;ReadPosRankSum=2.314;VQSLOD=4.7180;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,57:60:99:2338,157,0	1/1:1,5:6:8.86:135,9,0	0/0:14,0:13:20.66:0,21,388	0/0:16,0:16:29.40:0,29,314	0/0:18,0:18:48.16:0,48,623	1/1:0,16:16:42.14:628,42,0	1/1:4,23:27:60.19:899,60,0	1/1:6,26:32:81.26:1186,81,0	0/0:26,0:26:78.24:0,78,998	1/1:0,16:16:41.86:608,42,0	1/1:2,11:12:24.08:358,24,0	1/1:2,25:27:75.25:1124,75,0	0/0:26,0:26:78.22:0,78,980	1/1:1,18:19:51.09:736,51,0	1/1:0,29:29:72.24:1079,72,0	1/1:0,23:23:63.21:944,63,0	1/1:0,36:36:99:1481,99,0	1/1:1,31:32:87.29:1301,87,0	1/1:2,24:26:78.11:1066,78,0	1/1:4,16:20:42.14:629,42,0	1/1:2,42:44:99:1709,114,0	1/1:1,12:13:27.09:403,27,0	0/0:11,0:11:33.09:0,33,412	0/0:29,0:29:75.23:0,75,959	1/1:0,21:21:39.13:584,39,0	1/1:1,36:37:99:1588,111,0	1/1:1,24:24:63.04:944,63,0	1/1:0,3:2:6.02:90,6,0
chr10	64859790	.	CCTCT	C	72.72	PASS	AB=1.000;AC=8;AF=0.182;AN=44;BaseQRankSum=-0.271;DP=476;FS=4.977;HRun=0;HaplotypeScore=94.4383;InbreedingCoeff=0.2792;MQ=56.92;MQ0=14;MQRankSum=2.414;QD=0.88;ReadPosRankSum=1.014;VQSLOD=1.6066;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:20:6.02:0,6,98	./.	./.	./.	0/0:11,0:11:3.01:0,3,49	0/0:30,0:29:22.29:0,22,275	0/0:18,0:16:2.99:0,3,50	0/0:25,0:25:1.25:0,1,3	0/0:14,0:13:6.02:0,6,80	0/0:25,0:24:12.04:0,12,182	1/1:19,0:17:2.60:23,3,0	0/0:15,0:15:3.01:0,3,52	1/1:10,0:10:3.37:11,3,0	0/1:17,0:17:33.88:34,0,46	0/1:18,0:17:33.01:38,0,33	0/0:13,0:13:7.26:0,7,74	0/0:10,0:9:9.02:0,9,94	0/0:10,0:9:15.03:0,15,226	0/0:17,0:17:0.41:0,0,0	0/0:18,0:18:0.47:0,0,1	0/0:21,0:21:5.85:0,6,65	./.	0/0:4,5:9:0:0,0,0	1/1:19,0:18:5.30:77,5,0	./.	0/0:13,0:12:3.01:0,3,40	0/0:14,0:14:9.50:0,9,121	./.
chr10	64859836	.	TCACACACACACACACA	T	3742.69	PASS	AB=0.786;AC=22;AF=0.423;AN=52;BaseQRankSum=5.567;DP=366;FS=11.483;HRun=0;HaplotypeScore=131.0549;InbreedingCoeff=0.3918;MQ=38.67;MQ0=34;MQRankSum=-4.344;QD=24.95;ReadPosRankSum=0.657;VQSLOD=2.2001;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:18:21.03:0,21,1031	1/1:0,1:1:3.01:128,3,0	./.	./.	0/0:16,0:14:9.03:0,9,573	0/0:22,4:26:4.40:0,4,25	0/0:13,3:12:3.94:0,4,10	0/0:19,0:15:12.31:0,12,241	0/0:14,0:13:21.07:0,21,1327	1/1:11,6:12:15.47:659,15,0	0/0:5,3:8:0:0,0,0	0/1:6,5:11:14.44:234,0,14	0/0:11,0:10:24.08:0,24,1242	1/1:7,6:14:6.07:199,6,0	1/1:8,5:13:2.95:130,3,0	1/1:6,7:13:5.69:260,6,0	0/1:8,7:13:99:379,0,131	0/1:10,0:9:99:121,0,178	1/1:6,2:6:6.02:229,6,0	1/1:7,4:11:2.95:130,3,0	0/0:13,0:14:5.61:0,6,174	0/0:8,7:16:0.47:0,0,1	0/0:12,0:12:6.02:0,6,382	0/0:27,0:23:26.79:0,27,1533	0/0:8,3:12:2.60:0,3,10	1/1:8,4:8:12.01:500,12,0	1/1:8,9:16:13.14:650,13,0	0/1:5,1:5:67.49:124,0,67
chr10	64860370	.	T	TTGTGTG	9130.82	PASS	AB=1.000;AC=41;AF=0.759;AN=54;BaseQRankSum=-2.837;DP=592;FS=5.728;HRun=0;HaplotypeScore=109.5824;InbreedingCoeff=0.7774;MQ=56.67;MQ0=14;MQRankSum=-3.732;QD=20.43;ReadPosRankSum=-0.376;VQSLOD=3.7056;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:35,0:35:31.99:467,32,0	1/1:2,4:9:6.02:200,6,0	0/0:40,0:11:22.04:0,22,297	0/1:46,0:17:41.50:42,0,196	0/0:22,0:23:55.67:0,56,964	1/1:5,14:20:18.06:599,18,0	1/1:7,2:18:9.50:210,10,0	1/1:23,0:20:31.73:223,32,0	0/0:14,0:13:21.07:0,21,448	1/1:11,7:19:20.85:436,21,0	1/1:8,11:20:20.93:365,21,0	1/1:3,7:11:9.02:156,9,0	0/0:6,0:6:15.01:0,15,275	1/1:5,10:17:6.02:139,6,0	1/1:4,21:28:33.11:1014,33,0	1/1:3,11:15:24.08:676,24,0	1/1:5,10:18:12.04:312,12,0	1/1:8,11:20:3.01:100,3,0	1/1:10,4:15:21.02:352,21,0	1/1:2,21:27:42.05:781,42,0	./.	1/1:3,10:17:15.05:377,15,0	0/0:24,0:24:48.14:0,48,880	0/0:26,0:25:62.51:0,63,1103	1/1:8,17:28:27.09:858,27,0	1/1:11,16:30:51.35:990,51,0	1/1:6,15:22:21.07:696,21,0	1/1:1,2:4:6.02:139,6,0
chr10	64861037	.	T	TTGTGTGTGTGTGTGTG	8733.02	PASS	AB=0.853;AC=42;AF=0.778;AN=54;BaseQRankSum=-0.647;DP=674;FS=14.839;HRun=0;HaplotypeScore=271.5066;InbreedingCoeff=0.7296;MQ=56.36;MQ0=15;MQRankSum=-4.603;QD=17.68;ReadPosRankSum=-2.628;VQSLOD=1.8213;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:32,0:31:17:299,17,0	1/1:11,0:11:9.03:187,9,0	0/0:39,0:22:2.65:0,3,48	./.	1/1:19,0:18:9.03:161,9,0	1/1:24,0:24:8.08:319,8,0	1/1:29,0:26:28.02:481,28,0	1/1:34,0:34:45.14:905,45,0	0/0:23,0:24:30.10:0,30,1121	1/1:26,0:26:36.12:1285,36,0	1/1:22,0:22:12.04:228,12,0	1/1:14,0:13:9.03:231,9,0	0/0:20,0:21:28.36:0,28,650	0/1:13,0:13:0.24:0,0,0	1/1:16,0:24:3.01:129,3,0	0/1:14,6:23:0:0,0,0	1/1:31,0:31:30.08:629,30,0	1/1:14,0:14:12.04:300,12,0	1/1:26,0:26:24.08:646,24,0	1/1:24,0:24:17.12:534,17,0	1/1:27,0:26:9.01:152,9,0	1/1:20,0:19:7.88:217,8,0	0/0:27,0:29:29.80:0,30,961	0/0:35,0:36:48.36:0,48,1569	1/1:17,0:16:3.01:53,3,0	1/1:30,0:30:34.54:1097,35,0	1/1:13,3:20:12.01:459,12,0	1/1:12,0:12:12.04:422,12,0
chr10	64861289	.	C	CT	904.20	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-7.131;DP=667;FS=0.717;HRun=6;HaplotypeScore=63.8879;InbreedingCoeff=0.9909;MQ=85.10;MQ0=0;MQRankSum=-3.326;QD=25.12;ReadPosRankSum=-0.975;VQSLOD=3.2127;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,31:36:81.19:999,81,0	0/0:6,0:6:18.03:0,18,177	0/0:25,0:25:63.12:0,63,631	0/0:19,0:19:51.04:0,51,502	0/0:29,0:29:54.21:0,54,706	0/0:19,0:19:54.04:0,54,529	0/0:24,0:24:60.12:0,60,605	0/0:31,0:31:81.18:0,81,826	0/0:21,0:21:60.12:0,60,605	0/0:27,0:27:81.18:0,81,826	0/0:27,0:27:72.16:0,72,734	0/0:27,0:27:81.16:0,81,813	0/0:23,0:23:63.14:0,63,643	0/0:18,0:18:51.12:0,51,520	0/0:15,0:15:39.09:0,39,398	0/0:26,0:26:69.09:0,69,680	0/0:34,0:34:99:0,99,1010	0/0:23,0:23:69.16:0,69,704	0/0:35,0:35:93.15:0,93,924	0/0:27,0:27:78.11:0,78,783	0/0:27,0:27:75.17:0,75,765	0/0:18,0:18:48.09:0,48,483	0/0:23,0:23:69.13:0,69,691	0/0:30,0:30:84.18:0,84,857	0/0:23,0:23:69.16:0,69,704	0/0:29,0:29:84.19:0,84,857	0/0:16,0:16:45.08:0,45,450	0/0:9,0:9:27.06:0,27,275
chr10	64862574	.	AAAAC	A	12905.09	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=13.101;DP=688;FS=2.076;HRun=0;HaplotypeScore=121.4411;InbreedingCoeff=0.9955;MQ=67.88;MQ0=1;MQRankSum=-2.112;QD=30.22;ReadPosRankSum=4.591;VQSLOD=4.6498;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:82.44:0,82,2411	1/1:3,7:10:15.05:248,15,0	0/0:29,0:26:38.95:0,39,726	0/0:22,0:22:32.68:0,33,689	0/0:32,0:32:75.26:0,75,1839	1/1:4,16:20:45.15:743,45,0	1/1:7,13:20:30.10:495,30,0	0/0:29,0:34:63.21:0,63,1159	0/0:17,0:17:33.11:0,33,807	1/1:10,22:32:66.23:1086,66,0	1/1:3,15:18:42.06:633,42,0	1/1:5,12:17:24.08:396,24,0	0/0:21,0:21:48.16:0,48,1164	1/1:4,18:22:51.17:840,51,0	1/1:7,15:22:39:644,39,0	1/1:7,15:22:33.11:544,33,0	1/1:10,25:35:28.80:1049,29,0	1/1:7,8:15:24.08:396,24,0	1/1:9,14:23:42.13:665,42,0	1/1:14,11:25:33.11:545,33,0	1/1:8,38:46:99:1684,102,0	1/1:4,17:21:45.11:713,45,0	0/0:28,0:28:51.18:0,51,1218	0/0:29,0:29:63.21:0,63,1493	1/1:1,11:12:24.08:396,24,0	1/1:7,11:18:33.11:542,33,0	1/1:14,20:34:57.19:939,57,0	1/1:3,12:15:21.07:347,21,0
chr10	64862812	.	AGAGAGAGGGAGAGAGAGAGAGAGAGC	A	7712.29	PASS	AB=0.981;AC=29;AF=0.518;AN=56;BaseQRankSum=10.504;DP=491;FS=12.901;HRun=0;HaplotypeScore=260.9380;InbreedingCoeff=0.0140;MQ=54.39;MQ0=16;MQRankSum=-1.913;QD=21.72;ReadPosRankSum=3.457;VQSLOD=2.1195;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:23:39.29:39,0,653	1/1:6,0:5:2.98:22,3,0	0/0:11,0:2:3.01:0,3,91	0/0:19,0:7:10.40:0,10,372	0/0:14,0:13:27.09:0,27,1481	0/1:19,1:20:6.01:843,0,6	1/1:10,0:10:5.14:60,5,0	0/1:18,0:17:56.51:57,0,887	0/0:18,0:17:51.16:0,51,4786	0/1:19,1:20:44.92:784,0,45	0/1:10,1:10:15.94:243,0,16	1/1:16,0:16:9.03:457,9,0	0/0:22,0:22:58.43:0,58,4884	0/1:13,1:14:3.94:655,0,4	1/1:19,1:20:15.05:859,15,0	0/1:20,0:18:7.96:317,0,8	1/1:25,1:24:12.04:309,12,0	0/1:19,0:19:55.92:141,0,56	0/1:23,0:21:60.54:452,0,61	1/1:15,0:14:12.04:610,12,0	1/1:17,0:16:6.52:46,7,0	0/1:9,0:9:19.95:146,0,20	0/0:18,0:18:36.11:0,36,2570	0/0:34,0:34:90.31:0,90,8588	1/1:10,0:10:2.95:63,3,0	0/1:23,0:23:6.57:728,0,7	0/1:13,0:12:7.95:446,0,8	0/1:21,0:19:62.33:435,0,62
chr10	64862814	.	AGAGAGGGAGAGAGAGAGAGAGAGC	A	9940.08	PASS	AB=1.000;AC=40;AF=0.714;AN=56;BaseQRankSum=9.029;DP=475;FS=3.287;HRun=0;HaplotypeScore=232.3452;InbreedingCoeff=0.5610;MQ=57.31;MQ0=16;MQRankSum=-2.225;QD=29.32;ReadPosRankSum=2.242;VQSLOD=3.4796;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:23:96.02:96,0,345	1/1:6,0:5:3.01:42,3,0	0/0:12,0:3:1.69:0,2,90	0/0:19,0:9:6.52:0,7,352	0/0:14,0:13:27.09:0,27,1305	1/1:3,16:19:14.63:952,15,0	1/1:11,0:11:9.02:114,9,0	0/1:17,0:16:75.99:76,0,604	0/0:17,0:16:48.16:0,48,4345	1/1:5,14:19:35.05:1000,35,0	1/1:3,7:9:6.02:264,6,0	1/1:4,9:13:9.03:596,9,0	0/0:22,0:22:58.27:0,58,4377	1/1:8,6:14:12.04:774,12,0	1/1:8,12:20:15.05:950,15,0	1/1:6,11:15:6.02:397,6,0	1/1:7,17:22:12.04:449,12,0	1/1:3,14:17:3.01:199,3,0	1/1:5,17:21:3.47:554,3,0	1/1:4,11:14:12.04:795,12,0	1/1:15,0:14:14.96:222,15,0	1/1:3,6:9:3.01:199,3,0	0/0:17,0:17:33.11:0,33,2259	0/0:35,0:35:93.32:0,93,7862	1/1:4,6:10:2.78:109,3,0	1/1:2,21:23:49.16:961,49,0	1/1:4,9:12:9.03:597,9,0	1/1:8,13:19:7.67:594,8,0
chr10	64862998	.	AAAAT	A	2043.97	PASS	AB=0.708;AC=31;AF=0.705;AN=44;BaseQRankSum=3.695;DP=244;FS=4.008;HRun=0;HaplotypeScore=40.2816;InbreedingCoeff=0.5146;MQ=73.58;MQ0=2;MQRankSum=0.499;QD=14.29;ReadPosRankSum=0.044;VQSLOD=2.6748;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:12.04:0,12,259	1/1:1,0:1:3.01:45,3,0	./.	./.	0/0:11,0:11:15.05:0,15,331	1/1:3,5:8:12.04:184,12,0	1/1:3,1:4:3.01:46,3,0	0/0:31,0:29:6.02:0,6,79	0/0:5,0:5:3.01:0,3,70	1/1:5,1:6:3.01:46,3,0	1/1:3,1:4:3.01:46,3,0	0/0:7,0:7:6.02:0,6,140	./.	1/1:3,4:7:12.04:184,12,0	1/1:7,1:8:3.01:46,3,0	./.	1/1:16,8:24:18.06:276,18,0	0/1:10,7:17:3.46:211,0,3	1/1:7,4:10:12.02:162,12,0	1/1:5,0:5:3.01:45,3,0	1/1:4,2:6:6.02:92,6,0	./.	0/0:6,0:6:3.01:0,3,48	./.	1/1:6,4:10:9.03:138,9,0	1/1:5,7:12:18.04:251,18,0	1/1:3,1:4:3.01:46,3,0	1/1:6,10:16:24.08:369,24,0
chr10	64863041	.	AT	A	872.34	PASS	AB=0.554;AC=1;AF=0.018;AN=56;BaseQRankSum=3.892;DP=244;FS=19.375;HRun=1;HaplotypeScore=34.8850;InbreedingCoeff=0.0719;MQ=64.06;MQ0=3;MQRankSum=-0.644;QD=24.23;ReadPosRankSum=-1.005;VQSLOD=1.8705;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:57.11:0,57,745	0/0:4,0:4:8.80:0,9,108	0/0:4,0:3:9.02:0,9,105	0/0:5,0:3:5.94:0,6,42	0/0:9,0:9:27.09:0,27,401	0/0:9,0:9:15.57:0,16,157	0/0:1,0:1:0.89:0,1,2	0/1:7,29:35:99:946,0,109	0/0:3,0:3:9.03:0,9,130	0/0:8,0:8:21.96:0,22,296	0/0:10,0:10:27.96:0,28,361	0/0:3,0:3:9.03:0,9,134	0/0:2,0:2:6:0,6,66	0/0:5,0:5:6.53:0,7,30	0/0:6,0:6:15.91:0,16,178	0/0:8,0:8:24.07:0,24,318	0/0:16,0:16:29.40:0,29,346	0/0:25,0:25:57.92:0,58,679	0/0:9,0:8:17.69:0,18,197	0/0:10,0:10:26.86:0,27,360	0/0:5,0:5:10.80:0,11,129	0/0:1,0:1:3:0,3,25	0/0:5,0:5:15.05:0,15,212	0/0:2,0:2:6.02:0,6,88	0/0:7,0:7:11.67:0,12,114	0/0:9,0:9:14.15:0,14,116	0/0:3,0:3:6.91:0,7,86	0/0:20,0:20:37.17:0,37,416
chr10	64867035	.	TA	T	261.29	PASS	AB=0.959;AC=10;AF=0.179;AN=56;BaseQRankSum=-2.605;DP=535;FS=3.184;HRun=13;HaplotypeScore=125.8040;InbreedingCoeff=0.2816;MQ=68.82;MQ0=6;MQRankSum=-0.074;QD=1.96;ReadPosRankSum=-1.130;VQSLOD=0.5389;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:15,11:25:8.93:270,9,0	0/1:4,0:4:0.69:1,0,28	0/0:31,0:14:27.71:0,28,207	0/0:24,0:13:5.45:0,5,68	0/0:36,0:36:67.03:0,67,296	0/0:13,0:13:16.67:0,17,76	0/0:10,0:10:8.39:0,8,39	1/1:23,0:24:29.43:80,29,0	0/0:11,1:12:11.10:0,11,261	0/0:27,0:27:1.12:0,1,124	0/1:24,1:24:5.95:6,0,132	0/0:14,0:14:24.03:0,24,107	0/0:16,0:16:39.06:0,39,379	0/0:10,0:10:18.03:0,18,81	0/0:14,0:14:19.53:0,20,91	0/0:16,0:16:22.38:0,22,104	0/0:26,0:27:32.48:0,32,163	0/0:28,0:28:47.51:0,48,222	0/1:9,0:10:11.21:11,0,23	0/0:29,0:29:14.83:0,15,179	0/1:11,1:12:1.77:2,0,58	0/1:8,0:8:7.58:8,0,9	0/0:16,2:18:11.43:0,11,253	0/0:12,0:12:30.05:0,30,292	0/0:28,0:27:46.87:0,47,213	0/1:22,1:23:19.43:19,0,115	0/0:26,2:27:18.60:0,19,147	0/0:8,0:8:17.25:0,17,75
chr10	64867039	.	AAAAAAAAAAC	A	1066.04	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=-4.058;DP=556;FS=0.705;HRun=0;HaplotypeScore=204.6002;InbreedingCoeff=0.6269;MQ=67.05;MQ0=6;MQRankSum=-1.456;QD=18.38;ReadPosRankSum=-3.022;VQSLOD=2.2590;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:31:56.44:0,56,1325	0/0:6,0:6:14.81:0,15,517	0/0:33,0:15:35.69:0,36,477	0/0:25,0:12:20.80:0,21,147	0/1:33,0:33:8.39:8,0,2606	0/0:12,0:12:18.06:0,18,771	0/0:12,0:12:9.03:0,9,379	1/1:4,21:24:63.04:1159,63,0	0/0:12,0:12:36.12:0,36,1554	0/0:24,0:24:60.03:0,60,1857	0/0:26,0:25:71.13:0,71,2118	0/0:15,0:15:27.56:0,28,1162	0/0:16,0:16:45.14:0,45,1659	0/0:11,0:11:21.07:0,21,781	0/0:13,0:13:21.07:0,21,835	0/0:16,0:16:27.56:0,28,1122	0/0:27,0:27:40.09:0,40,1690	0/0:31,0:31:57.64:0,58,2179	0/0:10,0:10:24.94:0,25,738	0/0:29,0:29:74.49:0,74,2423	0/0:11,0:11:20.86:0,21,804	0/0:12,0:12:19.42:0,19,369	0/0:18,0:18:45.15:0,45,1501	0/0:13,0:13:26.29:0,26,1382	0/0:28,0:27:57.18:0,57,2231	0/0:27,0:27:67.99:0,68,2116	0/0:29,0:28:47.80:0,48,1721	0/0:10,0:10:24.07:0,24,868
chr10	64867043	.	A	AAAAC	14751.61	PASS	AB=1.000;AC=43;AF=0.768;AN=56;BaseQRankSum=0.045;DP=577;FS=11.019;HRun=0;HaplotypeScore=111.7373;InbreedingCoeff=0.8512;MQ=64.64;MQ0=6;MQRankSum=0.294;QD=32.00;ReadPosRankSum=3.412;VQSLOD=4.5949;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:22,9:30:42.60:626,43,0	1/1:0,7:7:12.92:246,13,0	0/0:31,0:13:32.06:0,32,297	0/0:25,0:11:5.28:0,5,123	1/1:2,0:31:73.12:449,73,0	1/1:0,10:11:18.06:412,18,0	1/1:1,12:13:9.03:214,9,0	0/1:24,0:23:16.45:41,0,16	0/0:13,0:13:36.08:0,36,526	1/1:5,20:26:60.08:1161,60,0	1/1:3,22:27:54.74:1193,55,0	1/1:1,14:19:27.09:549,27,0	0/0:15,0:15:45.13:0,45,668	1/1:2,13:16:21.04:464,21,0	1/1:1,13:16:21.07:501,21,0	1/1:1,16:17:24.08:573,24,0	1/1:2,26:28:44.83:961,45,0	1/1:2,30:32:51.15:1217,51,0	1/1:5,8:13:23.64:365,24,0	1/1:1,26:30:78.08:1425,78,0	1/1:1,11:12:12.89:422,13,0	1/1:0,10:10:17.89:197,18,0	0/0:17,0:17:39.45:0,39,564	0/0:14,0:14:24.42:0,24,483	1/1:2,24:27:51.14:1162,51,0	1/1:3,25:28:59.55:1184,60,0	1/1:3,25:30:36.05:957,36,0	1/1:2,8:10:20.08:434,20,0
chr10	64867279	.	CTT	C	9036.90	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=2.147;DP=531;FS=2.899;HRun=11;HaplotypeScore=115.2218;InbreedingCoeff=0.9496;MQ=60.46;MQ0=7;MQRankSum=-7.188;QD=25.60;ReadPosRankSum=5.055;VQSLOD=4.5942;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:24:46.56:0,47,160	1/1:2,3:4:9.02:96,9,0	0/0:26,0:13:35.22:0,35,382	0/0:22,1:12:21.02:0,21,259	1/1:4,15:19:48:484,48,0	1/1:1,17:18:51.06:527,51,0	1/1:6,6:12:24.03:255,24,0	0/0:10,0:39:73.03:0,73,272	0/0:17,0:17:42.08:0,42,578	1/1:4,16:20:54.13:572,54,0	1/1:1,11:11:29.91:289,30,0	1/1:5,16:21:54.06:560,54,0	0/0:15,0:15:39.05:0,39,495	1/1:3,16:19:51.12:543,51,0	1/1:2,10:12:30.07:319,30,0	1/1:4,14:17:1.92:433,2,0	1/1:8,19:25:56.94:566,57,0	1/1:3,8:10:17.96:191,18,0	1/1:9,20:29:66.09:751,66,0	1/1:0,19:19:57.08:592,57,0	1/1:3,6:10:12.48:129,12,0	1/1:3,10:13:33.08:350,33,0	0/0:13,0:13:27.97:0,28,398	0/0:18,0:19:41.28:0,41,478	1/1:1,21:22:63.02:641,63,0	1/1:6,20:26:66.10:690,66,0	1/1:4,16:20:48.11:510,48,0	1/1:10,9:19:51.12:541,51,0
chr10	64867309	.	CT	C	5866.08	PASS	AB=0.825;AC=45;AF=0.804;AN=56;BaseQRankSum=8.702;DP=542;FS=4.247;HRun=11;HaplotypeScore=132.1046;InbreedingCoeff=0.6038;MQ=46.30;MQ0=11;MQRankSum=-8.267;QD=12.72;ReadPosRankSum=1.803;VQSLOD=3.9928;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,21:27:39.96:341,40,0	1/1:0,5:5:11.98:98,12,0	0/0:27,0:5:2.22:0,2,7	0/1:23,0:8:5.83:6,0,19	1/1:5,18:23:24.65:281,25,0	1/1:2,22:24:41.94:345,42,0	0/1:3,5:8:2.95:77,0,3	1/1:13,13:26:38.84:315,39,0	0/0:14,0:14:36.09:0,36,379	1/1:10,13:22:35.89:290,36,0	1/1:2,19:20:35.74:282,36,0	1/1:5,14:19:29.95:246,30,0	0/1:16,2:18:28.58:29,0,326	1/1:8,9:16:23.90:190,24,0	1/1:3,12:14:35.86:284,36,0	1/1:5,18:22:44.86:361,45,0	1/1:7,20:25:50.90:414,51,0	1/1:1,11:10:26.95:218,27,0	1/1:8,12:19:35.91:291,36,0	1/1:9,16:25:32.92:270,33,0	1/1:3,2:5:2.89:25,3,0	1/1:3,13:16:35.89:288,36,0	0/0:18,1:19:17.41:0,17,366	0/0:20,1:21:17.93:0,18,389	1/1:5,20:24:26.75:370,27,0	1/1:6,19:26:52.95:424,53,0	1/1:7,10:17:29.95:246,30,0	1/1:4,9:12:4.49:174,4,0
chr10	64869264	.	TTGTG	T	1842.67	PASS	AC=34;AF=0.739;AN=46;BaseQRankSum=2.978;DP=623;FS=4.530;HRun=0;HaplotypeScore=95.7350;InbreedingCoeff=0.5971;MQ=64.84;MQ0=16;MQRankSum=1.540;QD=5.81;ReadPosRankSum=-0.306;VQSLOD=1.2383;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:31:5.80:0,6,33	1/1:6,2:7:3.01:46,3,0	./.	./.	1/1:19,2:20:6.02:93,6,0	1/1:18,4:21:6.01:93,6,0	0/0:30,0:39:16.71:0,17,84	./.	1/1:14,0:19:9.01:84,9,0	1/1:23,0:23:11.70:82,12,0	./.	1/1:16,2:19:12.02:145,12,0	0/0:14,0:15:14.74:0,15,179	1/1:13,4:17:9.03:139,9,0	1/1:20,9:29:15.05:232,15,0	1/1:14,5:20:15.04:213,15,0	1/1:16,10:26:14.64:358,15,0	1/1:15,4:20:9.02:121,9,0	./.	1/1:12,3:15:2.96:20,3,0	0/0:42,0:40:1.22:0,1,3	1/1:17,6:23:9.03:139,9,0	0/0:9,0:10:2.74:0,3,12	0/0:34,0:36:41.84:0,42,785	1/1:14,5:18:4.56:50,5,0	1/1:17,3:19:4.66:86,5,0	1/1:8,0:6:3:44,3,0	1/1:5,2:7:3.01:46,3,0
chr10	64869896	.	CAG	C	1513.73	PASS	AB=0.853;AC=33;AF=0.717;AN=46;BaseQRankSum=6.205;DP=546;FS=11.608;HRun=0;HaplotypeScore=67.6456;InbreedingCoeff=-0.0489;MQ=74.86;MQ0=10;MQRankSum=-0.123;QD=3.87;ReadPosRankSum=1.437;VQSLOD=1.0658;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:12.03:0,12,154	./.	./.	./.	0/1:22,1:23:5.41:5,0,194	0/1:18,5:23:9.08:96,0,9	1/1:6,4:10:12.03:130,12,0	./.	0/0:18,0:18:12.03:0,12,157	1/1:25,0:24:5.84:43,6,0	1/1:23,2:25:12.01:119,12,0	1/1:18,2:20:9.01:97,9,0	0/1:22,2:24:14.33:14,0,202	1/1:12,6:19:20.88:208,21,0	0/1:16,2:18:35.40:55,0,35	1/1:11,5:18:20.55:171,21,0	0/1:13,4:20:26.74:107,0,27	1/1:13,7:21:1.23:185,1,0	0/1:14,2:14:20.43:20,0,79	1/1:18,4:22:12.03:130,12,0	1/1:17,4:21:3:32,3,0	1/1:14,0:15:5.83:38,6,0	0/1:16,1:20:30.62:31,0,199	0/1:11,0:13:33.73:34,0,75	1/1:10,1:12:5.85:46,6,0	./.	1/1:10,1:14:8.48:60,8,0	0/1:7,1:10:34.20:38,0,34
chr10	64870313	.	TAGACCCTACTC	T	2513	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.794;DP=660;FS=0.686;HRun=0;HaplotypeScore=208.3205;InbreedingCoeff=0.9998;MQ=80.82;MQ0=0;MQRankSum=-6.058;QD=51.29;ReadPosRankSum=-2.067;VQSLOD=3.0543;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,99,5079	0/0:12,0:12:36.12:0,36,2010	0/0:22,0:22:37.41:0,37,2720	0/0:22,0:22:53.97:0,54,2671	1/1:2,26:28:48.16:1584,48,0	0/0:25,0:25:69.24:0,69,3812	0/0:19,0:19:51.18:0,51,2811	1/1:8,13:21:39.13:1050,39,0	0/0:18,0:18:54.19:0,54,2931	0/0:26,0:26:69.24:0,69,3396	0/0:31,0:31:90.31:0,90,4960	0/0:24,0:24:72.25:0,72,3864	0/0:17,0:17:48.16:0,48,2462	0/0:18,0:18:51.18:0,51,2688	0/0:22,0:22:63.22:0,63,3573	0/0:21,0:21:60.21:0,60,3192	0/0:20,0:20:57.20:0,57,3190	0/0:17,0:17:51.18:0,51,2688	0/0:26,0:26:69.24:0,69,3738	0/0:25,0:25:72.25:0,72,3821	0/0:33,0:33:90.31:0,90,4635	0/0:18,0:18:51.16:0,51,2456	0/0:26,0:26:66.23:0,66,3261	0/0:22,0:22:63.22:0,63,3426	0/0:29,0:29:84.29:0,84,4475	0/0:29,0:29:75.26:0,75,3856	0/0:35,0:34:90.31:0,90,4967	0/0:17,0:17:39.13:0,39,2084
chr10	64870726	.	C	CAGAG	2171.72	PASS	AB=0.896;AC=39;AF=0.722;AN=54;BaseQRankSum=-1.405;DP=480;FS=24.864;HRun=0;HaplotypeScore=95.1988;InbreedingCoeff=0.2334;MQ=68.13;MQ0=14;MQRankSum=-1.856;QD=6.05;ReadPosRankSum=-0.477;VQSLOD=0.5944;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:17,4:26:6.56:74,0,7	0/1:5,0:5:0:0,0,0	./.	0/0:40,0:13:0.89:0,1,2	0/1:20,0:20:28.40:28,0,39	1/1:14,0:14:18.06:300,18,0	1/1:14,0:19:8.50:95,8,0	1/1:30,0:28:3.46:24,3,0	0/1:9,0:8:16.93:17,0,40	1/1:14,0:14:8.99:119,9,0	1/1:5,6:14:3.01:70,3,0	1/1:10,0:10:6.02:111,6,0	0/0:15,0:15:12.03:0,12,166	1/1:13,3:17:6.02:121,6,0	0/1:13,6:19:40.16:64,0,40	0/1:8,4:11:40.17:64,0,40	1/1:12,5:17:3.48:71,3,0	1/1:7,5:14:3.48:71,3,0	1/1:14,0:14:12.01:191,12,0	1/1:8,0:8:12.03:177,12,0	1/1:13,0:25:2.80:13,3,0	0/1:8,0:7:0:0,0,0	0/0:13,0:13:14.86:0,15,176	0/0:18,0:19:5.92:0,6,74	1/1:11,0:11:5.91:94,6,0	1/1:15,0:15:19.02:231,19,0	1/1:15,9:27:14.78:221,15,0	1/1:10,0:10:12.93:163,13,0
chr10	64870937	.	CTT	C	1646.32	PASS	AB=0.917;AC=5;AF=0.089;AN=56;BaseQRankSum=5.899;DP=486;FS=3.178;HRun=12;HaplotypeScore=61.0435;InbreedingCoeff=0.7330;MQ=68.62;MQ0=3;MQRankSum=0.074;QD=19.60;ReadPosRankSum=-2.008;VQSLOD=2.4561;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:29:83.73:0,84,1149	0/0:9,0:8:21.07:0,21,313	0/0:6,0:5:9.01:0,9,111	0/0:13,0:11:12:0,12,135	1/1:5,21:26:63.12:641,63,0	0/0:15,0:15:33.11:0,33,492	0/0:9,0:9:24.07:0,24,338	1/1:8,39:47:94.05:1125,94,0	0/0:13,0:14:38.60:0,39,526	0/0:20,0:20:42.09:0,42,583	0/0:16,0:16:45.01:0,45,620	0/1:10,1:11:3.42:3,0,329	0/0:15,0:15:39.12:0,39,561	0/0:12,0:12:30.10:0,30,446	0/0:17,0:17:39.08:0,39,532	0/0:13,0:12:27.09:0,27,402	0/0:28,0:28:71.70:0,72,1006	0/0:21,0:22:59.56:0,60,785	0/0:24,0:23:47.38:0,47,591	0/0:23,0:23:57.14:0,57,805	0/0:14,0:14:21.07:0,21,313	0/0:2,0:2:3.01:0,3,45	0/0:7,0:7:12.03:0,12,159	0/0:9,0:9:27.09:0,27,396	0/0:16,0:18:41.62:0,42,572	0/0:26,0:28:59.95:0,60,859	0/0:19,0:21:50.59:0,51,645	0/0:15,0:15:35.61:0,36,502
chr10	64872187	.	AT	A	9968.64	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=8.786;DP=578;FS=9.638;HRun=9;HaplotypeScore=57.6841;InbreedingCoeff=0.9897;MQ=75.53;MQ0=0;MQRankSum=-2.623;QD=23.79;ReadPosRankSum=2.990;VQSLOD=5.4719;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,29:33:61.33:719,61,0	1/1:1,12:13:36.02:330,36,0	0/0:18,0:17:32.56:0,33,336	0/0:13,0:11:9.05:0,9,111	0/0:28,0:28:81.22:0,81,917	1/1:1,17:18:48.03:439,48,0	1/1:0,17:17:48.03:439,48,0	0/0:28,0:28:75.18:0,75,836	0/0:14,0:14:36.09:0,36,404	1/1:0,20:20:60.03:549,60,0	1/1:3,21:24:60.02:548,60,0	1/1:4,19:23:57.03:522,57,0	0/0:15,0:15:42.12:0,42,485	1/1:2,14:16:36.02:330,36,0	1/1:0,26:26:69.04:631,69,0	1/1:1,15:16:39.02:357,39,0	1/1:1,20:21:54.03:494,54,0	1/1:1,18:19:54.03:494,54,0	1/1:3,22:26:68.05:603,68,0	1/1:2,30:32:87.05:796,87,0	1/1:1,10:11:24.01:220,24,0	1/1:2,19:21:54.01:494,54,0	0/0:21,0:21:63.19:0,63,727	0/0:22,0:22:66.18:0,66,751	1/1:1,11:12:33.02:302,33,0	1/1:6,26:32:75.02:686,75,0	1/1:0,26:26:72.04:659,72,0	1/1:0,13:13:39.02:357,39,0
chr10	64872677	.	AACACACACACACACAC	A	5764.75	PASS	AB=0.847;AC=31;AF=0.554;AN=56;BaseQRankSum=5.572;DP=676;FS=9.858;HRun=0;HaplotypeScore=263.7285;InbreedingCoeff=0.4262;MQ=70.06;MQ0=7;MQRankSum=-4.081;QD=14.59;ReadPosRankSum=0.573;VQSLOD=1.8561;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:48:48.14:0,48,1552	1/1:8,0:8:5.99:154,6,0	0/0:27,0:20:2.99:0,3,23	0/0:29,0:21:9.03:0,9,170	0/0:10,0:15:12.02:0,12,391	1/1:24,2:27:18.45:475,18,0	0/1:21,0:21:11.68:129,0,12	0/0:34,0:33:24.08:0,24,531	0/0:20,0:28:18.06:0,18,772	0/1:11,0:26:60.95:258,0,61	0/0:5,0:13:3.42:0,3,12	1/1:14,3:17:3.01:91,3,0	0/0:21,0:20:23.60:0,24,592	1/1:10,12:22:9.03:291,9,0	1/1:15,20:36:19.42:700,19,0	0/1:9,9:20:19.74:672,0,20	0/1:21,0:21:95.03:232,0,95	1/1:18,1:19:32.31:1014,32,0	1/1:8,6:14:4.65:222,5,0	1/1:5,5:11:5.55:209,6,0	0/1:63,0:62:31.36:42,0,31	1/1:9,9:17:2.97:20,3,0	0/0:18,0:18:27.09:0,27,884	0/0:46,0:48:90.31:0,90,4439	1/1:6,9:15:2.99:131,3,0	1/1:13,14:27:34.49:714,34,0	1/1:9,11:21:9.50:280,9,0	1/1:3,5:8:3.01:131,3,0
chr10	64872709	.	C	CTCGT	2693.42	PASS	AB=0.935;AC=16;AF=0.286;AN=56;BaseQRankSum=10.407;DP=754;FS=69.138;HRun=0;HaplotypeScore=171.9378;InbreedingCoeff=-0.4008;MQ=48.76;MQ0=36;MQRankSum=-6.637;QD=7.78;ReadPosRankSum=7.594;VQSLOD=0.0332;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:57:88.51:0,89,1682	0/1:10,0:8:69.26:69,0,209	0/0:26,0:8:21.05:0,21,350	0/0:42,0:13:36.12:0,36,702	0/0:20,0:19:30.08:0,30,525	0/1:17,3:18:99:270,0,312	0/1:24,4:26:57.45:57,0,747	0/0:29,0:27:78.25:0,78,1462	0/0:27,0:27:38.56:0,39,692	0/1:32,0:30:99:120,0,819	0/0:14,0:14:18.06:0,18,310	0/1:12,0:14:30.61:31,0,339	0/0:20,0:18:36.88:0,37,621	0/1:23,0:20:99:173,0,264	0/1:37,0:38:99:289,0,616	0/1:21,0:20:99:284,0,163	0/1:12,7:20:99:164,0,365	0/1:16,5:21:99:664,0,397	0/1:23,0:21:99:130,0,554	0/1:12,0:13:38.35:38,0,331	0/0:51,15:70:36.67:0,37,1515	0/0:23,0:23:33.10:0,33,599	0/0:25,0:25:51.09:0,51,990	0/0:53,0:53:99:0,135,2657	0/1:22,0:22:28.60:29,0,431	0/1:32,0:26:99:350,0,506	0/1:20,0:18:99:132,0,305	0/1:6,0:6:50.22:54,0,50
chr10	64874918	.	GCA	G	184.82	PASS	AB=0.744;AC=1;AF=0.018;AN=56;BaseQRankSum=5.175;DP=340;FS=0.000;HRun=0;HaplotypeScore=69.7542;InbreedingCoeff=-0.0577;MQ=52.92;MQ0=0;MQRankSum=-3.769;QD=6.37;ReadPosRankSum=1.054;VQSLOD=2.9317;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:12,1:13:21.05:0,21,357	0/0:6,0:6:6.61:0,7,79	0/0:13,0:12:31.09:0,31,605	0/0:16,0:13:36.12:0,36,681	0/0:15,0:15:8.67:0,9,183	0/0:8,1:9:11.70:0,12,194	0/0:17,1:18:24.23:0,24,432	0/1:19,10:29:99:259,0,871	0/0:13,1:14:9.50:0,10,171	0/0:15,0:15:42.14:0,42,842	0/0:9,0:9:8.75:0,9,145	0/0:13,0:13:18.03:0,18,281	0/0:20,0:20:18.89:0,19,455	0/0:7,0:7:6.02:0,6,122	0/0:9,0:9:3.01:0,3,61	0/0:13,1:14:15.05:0,15,305	0/0:8,0:8:12.04:0,12,221	0/0:14,0:14:36.12:0,36,672	0/0:5,0:5:15.05:0,15,305	0/0:10,0:10:15.05:0,15,282	0/0:19,0:19:35.87:0,36,683	0/0:13,0:13:6.28:0,6,112	0/0:10,0:10:6.02:0,6,111	0/0:7,0:7:6.02:0,6,108	0/0:7,0:7:15.05:0,15,293	0/0:10,0:10:30.10:0,30,567	0/0:11,1:12:11.24:0,11,230	0/0:5,0:5:12.04:0,12,240
chr10	64875932	.	AAAAAAG	A	972.17	PASS	AB=0.990;AC=21;AF=0.375;AN=56;BaseQRankSum=0.959;DP=333;FS=8.678;HRun=0;HaplotypeScore=85.5537;InbreedingCoeff=-0.4140;MQ=40.12;MQ0=27;MQRankSum=-2.393;QD=3.71;ReadPosRankSum=-4.154;VQSLOD=-0.4991;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:17,3:17:84.53:275,0,85	0/0:3,0:3:5.34:0,5,22	0/1:20,0:4:1.54:2,0,73	0/0:19,0:5:3.44:0,3,21	0/1:17,0:17:5.10:203,0,5	0/1:15,1:14:33.53:34,0,263	0/1:12,0:11:8.02:50,0,8	0/0:14,0:13:39.08:0,39,631	0/0:9,0:7:14.10:0,14,188	0/1:13,0:12:32.60:58,0,33	0/1:10,0:9:23.48:23,0,53	0/1:12,0:9:15.90:16,0,50	0/0:5,0:5:9.50:0,10,207	0/1:8,0:8:20.89:21,0,39	0/1:11,0:9:63.34:63,0,100	0/1:14,0:11:7.45:7,0,160	0/1:25,0:19:44.19:44,0,100	0/1:15,0:11:48.39:48,0,126	0/1:11,0:11:24.89:25,0,91	1/1:11,0:11:4.87:64,5,0	0/1:5,0:2:7.66:14,0,8	0/0:5,0:5:13.63:0,14,98	0/0:8,0:8:8.96:0,9,87	0/0:8,0:6:14.98:0,15,195	0/1:12,0:10:42.12:42,0,60	0/1:13,0:12:31.91:65,0,32	0/1:12,0:11:40.68:41,0,137	0/1:5,0:3:7.07:32,0,7
chr10	64875933	.	AAAAAG	A	2066.42	PASS	AB=0.972;AC=32;AF=0.571;AN=56;BaseQRankSum=3.216;DP=336;FS=3.814;HRun=0;HaplotypeScore=78.9108;InbreedingCoeff=0.0319;MQ=40.13;MQ0=27;MQRankSum=-4.351;QD=7.57;ReadPosRankSum=-1.350;VQSLOD=1.8620;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:17,2:17:40.29:370,0,40	1/1:3,0:3:3.58:10,4,0	0/1:21,0:4:1.63:2,0,51	0/0:19,0:5:2.84:0,3,9	1/1:18,1:19:28.78:380,29,0	0/1:16,0:14:67.52:68,0,160	1/1:11,1:11:22.26:136,22,0	0/0:14,0:13:39.07:0,39,528	0/0:9,0:7:14.03:0,14,169	1/1:12,1:12:21.75:125,22,0	0/1:9,1:9:9.64:43,0,10	1/1:13,0:10:12.40:102,12,0	0/1:5,0:5:6.40:6,0,152	0/1:8,0:8:2.87:53,0,3	0/1:10,1:9:68.74:108,0,69	0/1:14,0:11:49.65:50,0,75	1/1:26,0:20:3.17:133,3,0	0/1:14,1:11:74.44:96,0,74	0/1:10,0:10:25.99:45,0,26	1/1:12,0:12:27.18:185,27,0	1/1:5,0:2:4.52:24,5,0	0/0:5,0:5:1.44:0,1,42	0/0:8,0:8:6:0,6,54	0/0:8,0:6:12:0,12,135	0/1:12,0:10:16.30:77,0,16	1/1:12,0:11:6.53:130,7,0	0/1:12,0:11:53.68:54,0,77	1/1:5,0:3:5.08:40,5,0
chr10	64875937	.	AGAAC	A	2773.09	PASS	AB=0.941;AC=38;AF=0.679;AN=56;BaseQRankSum=2.635;DP=332;FS=16.333;HRun=0;HaplotypeScore=72.7666;InbreedingCoeff=0.3140;MQ=40.19;MQ0=26;MQRankSum=-4.313;QD=10.16;ReadPosRankSum=-0.343;VQSLOD=0.9179;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:19,1:18:28.94:233,0,29	1/1:2,0:2:5.51:51,6,0	0/1:21,0:4:0.14:0,0,68	0/0:18,0:5:2.71:0,3,9	1/1:17,2:19:49.32:345,49,0	0/1:15,0:13:79.41:130,0,79	1/1:12,1:12:26.87:216,27,0	0/0:20,0:19:57.11:0,57,794	0/0:7,0:5:14.26:0,14,201	1/1:13,0:12:24.92:144,25,0	1/1:10,0:9:15.70:73,16,0	1/1:12,1:10:23.83:157,24,0	0/1:4,0:5:11.42:11,0,81	1/1:8,0:8:14.24:132,14,0	0/1:11,0:9:48.60:124,0,49	0/1:13,0:10:44.54:121,0,45	1/1:24,1:19:34.80:245,35,0	0/1:15,0:12:36.27:71,0,36	1/1:9,0:9:13.63:94,14,0	1/1:11,1:12:27.93:203,28,0	1/1:5,0:2:5.33:27,5,0	1/1:2,1:4:8.04:74,8,0	0/0:2,0:6:5.85:0,6,62	0/0:7,0:5:15.05:0,15,232	1/1:11,1:10:22.09:139,22,0	1/1:11,0:10:24.32:196,24,0	0/1:9,0:10:0.96:109,0,1	1/1:4,0:3:8.18:53,8,0
chr10	64875952	.	AAT	A	4080.34	PASS	AB=0.770;AC=38;AF=0.679;AN=56;BaseQRankSum=0.104;DP=340;FS=3.786;HRun=0;HaplotypeScore=57.5976;InbreedingCoeff=0.4224;MQ=52.63;MQ0=18;MQRankSum=0.475;QD=15.23;ReadPosRankSum=3.769;VQSLOD=2.9586;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:20,0:18:7.15:7,0,64	1/1:0,6:6:12:145,12,0	0/0:26,0:7:13.93:0,14,157	0/0:21,0:7:11.94:0,12,120	0/1:17,0:17:13.83:34,0,14	0/1:1,10:9:17.09:164,0,17	1/1:2,11:11:17.92:222,18,0	0/1:20,1:20:28.26:150,0,28	0/0:7,0:6:17.97:0,18,229	1/1:2,12:13:29.54:335,30,0	1/1:4,7:10:18.03:226,18,0	1/1:4,8:10:14.83:205,15,0	0/0:4,0:4:2.70:0,3,18	1/1:3,5:8:5.91:57,6,0	0/1:2,7:8:4.47:120,0,4	0/1:3,8:9:20.31:151,0,20	1/1:5,17:20:36.07:471,36,0	1/1:3,7:7:6.02:83,6,0	1/1:10,5:15:39.07:451,39,0	1/1:3,12:15:32.76:338,33,0	1/1:1,4:4:6.02:78,6,0	1/1:1,4:5:11.91:101,12,0	0/0:6,0:6:11.05:0,11,140	0/0:8,0:7:18.02:0,18,293	1/1:3,9:10:12:165,12,0	1/1:2,9:10:26.53:279,27,0	1/1:3,11:13:17.89:215,18,0	1/1:1,5:5:6.02:81,6,0
chr10	64875953	.	AT	A	2736.81	PASS	AB=1.000;AC=42;AF=0.778;AN=54;BaseQRankSum=1.150;DP=332;FS=9.234;HRun=4;HaplotypeScore=55.8266;InbreedingCoeff=0.6464;MQ=54.95;MQ0=17;MQRankSum=-1.039;QD=10.57;ReadPosRankSum=2.319;VQSLOD=0.4364;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,11:17:12.70:238,13,0	1/1:6,0:6:11.79:75,12,0	0/0:26,0:7:12.96:0,13,117	0/0:22,0:8:14.54:0,15,104	1/1:3,11:14:33.07:376,33,0	1/1:11,0:9:0.39:54,0,0	1/1:13,0:11:14.62:86,15,0	1/1:4,17:20:30.28:516,30,0	0/0:7,0:6:12.02:0,12,140	1/1:14,0:13:26.54:179,27,0	1/1:11,0:10:13.18:81,13,0	1/1:11,0:9:14.67:91,15,0	./.	1/1:8,0:8:2.92:17,3,0	0/1:9,0:8:3.53:37,0,4	0/1:11,0:9:3.89:54,0,4	1/1:22,0:20:32.10:186,32,0	1/1:10,0:7:5.85:34,6,0	1/1:12,3:15:38.49:275,38,0	1/1:13,1:14:23.58:160,24,0	1/1:5,0:4:5.48:29,5,0	1/1:4,0:4:11.83:77,12,0	0/0:6,0:6:9.02:0,9,103	0/0:9,0:8:21.02:0,21,240	1/1:11,0:9:11.70:68,12,0	1/1:11,0:9:23.20:141,23,0	1/1:13,0:13:17.34:95,17,0	1/1:5,0:5:5.83:33,6,0
chr10	64876638	.	TAA	T	4420.82	PASS	AB=0.622;AC=38;AF=0.679;AN=56;BaseQRankSum=-2.839;DP=426;FS=9.522;HRun=15;HaplotypeScore=54.6274;InbreedingCoeff=0.5889;MQ=66.77;MQ0=8;MQRankSum=-0.674;QD=14.40;ReadPosRankSum=2.417;VQSLOD=3.1851;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:11,1:33:36.40:0,36,256	0/1:3,4:7:7.32:67,0,7	0/0:32,0:9:3.69:0,4,37	0/0:30,0:11:13.22:0,13,125	1/1:3,16:23:41.32:435,41,0	0/1:4,10:17:0.62:174,0,1	1/1:2,8:10:20.57:169,21,0	0/1:7,11:21:26.45:209,0,26	0/0:7,0:7:18.03:0,18,201	1/1:5,13:18:41.64:354,42,0	0/1:7,6:13:0.59:149,0,1	1/1:1,5:6:8.97:79,9,0	0/0:6,0:6:12.03:0,12,150	1/1:3,6:9:11.95:106,12,0	1/1:5,7:12:10.57:209,11,0	1/1:2,9:11:23.94:211,24,0	1/1:7,18:24:15.36:431,15,0	1/1:8,15:24:2.36:320,2,0	1/1:10,14:22:23.89:280,24,0	1/1:5,12:17:15.98:247,16,0	1/1:4,3:7:14.94:125,15,0	1/1:0,2:2:2.94:26,3,0	0/0:5,0:5:6.02:0,6,82	0/0:6,0:6:12.03:0,12,148	1/1:7,8:17:4.07:205,4,0	1/1:7,8:16:29.58:242,30,0	1/1:5,13:19:32.56:266,33,0	1/1:3,4:7:14.71:117,15,0
chr10	64877829	.	C	CG	810.87	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-2.513;DP=535;FS=9.979;HRun=0;HaplotypeScore=57.2882;InbreedingCoeff=0.9791;MQ=77.30;MQ0=0;MQRankSum=-2.010;QD=31.19;ReadPosRankSum=-1.324;VQSLOD=2.0485;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,26:26:63.21:906,63,0	0/0:6,0:6:18.06:0,18,250	0/0:16,0:16:16.98:0,17,394	0/0:15,0:15:33.04:0,33,409	0/0:12,0:12:36.09:0,36,467	0/0:15,0:15:35.98:0,36,543	0/0:22,0:22:66.17:0,66,848	0/0:14,0:14:32.91:0,33,365	0/0:22,0:22:66.18:0,66,869	0/0:14,0:14:39.11:0,39,503	0/0:10,0:10:24.08:0,24,326	0/0:18,0:18:51.14:0,51,663	0/0:19,0:19:57.18:0,57,770	0/0:27,0:27:81.19:0,81,1039	0/0:28,0:28:84.20:0,84,1060	0/0:24,0:24:72.23:0,72,989	0/0:32,0:32:96.24:0,96,1236	0/0:24,0:24:72.24:0,72,1000	0/0:15,0:15:40:0,40,527	0/0:24,0:24:69.12:0,69,898	0/0:24,0:23:63.14:0,63,794	0/0:13,0:13:38.99:0,39,495	0/0:15,0:15:45.09:0,45,570	0/0:33,0:33:96.25:0,96,1242	0/0:12,0:12:36.11:0,36,486	0/0:21,0:21:60.14:0,60,768	0/0:20,0:20:60.16:0,60,770	0/0:14,0:14:42.10:0,42,535
chr10	64878577	.	GCGCGCGCGCGCA	G	71.25	PASS	AB=1.000;AC=4;AF=0.071;AN=56;BaseQRankSum=3.490;DP=354;FS=0.000;HRun=0;HaplotypeScore=111.3351;InbreedingCoeff=0.3332;MQ=72.47;MQ0=10;MQRankSum=-2.318;QD=1.48;ReadPosRankSum=-2.994;VQSLOD=1.4615;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,21:22:6:94,6,0	0/0:6,0:6:14.16:0,14,606	0/1:12,0:11:27.29:27,0,138	0/1:14,0:8:51.32:56,0,51	0/0:15,0:14:30.10:0,30,1102	0/0:13,0:13:36.12:0,36,1652	0/0:28,0:27:63.15:0,63,2377	0/0:17,0:16:45.15:0,45,1249	0/0:12,0:12:33.10:0,33,1148	0/0:13,0:12:36.12:0,36,1543	0/0:6,0:6:15.05:0,15,592	0/0:18,0:18:47.99:0,48,1709	0/0:6,0:6:9.03:0,9,468	0/0:7,0:7:21.07:0,21,895	0/0:9,0:9:27.08:0,27,940	0/0:6,0:6:9.03:0,9,333	0/0:22,0:22:48.16:0,48,1658	0/0:10,0:9:24.08:0,24,1095	0/0:8,0:8:16.69:0,17,479	0/0:9,0:9:27.08:0,27,773	0/0:21,0:19:45.14:0,45,2032	0/0:10,0:10:18.06:0,18,813	0/0:7,0:6:18.06:0,18,574	0/0:21,0:21:60.21:0,60,3027	0/0:12,0:11:33.11:0,33,1492	0/0:12,0:12:36.12:0,36,1529	0/0:12,0:12:26.93:0,27,997	0/0:6,0:6:18.06:0,18,1030
chr10	64878587	.	GCACA	G	230.03	PASS	AB=1.000;AC=9;AF=0.173;AN=52;BaseQRankSum=3.242;DP=376;FS=14.499;HRun=0;HaplotypeScore=63.3123;InbreedingCoeff=0.3129;MQ=57.06;MQ0=16;MQRankSum=0.142;QD=2.07;ReadPosRankSum=-1.995;VQSLOD=-0.1211;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:1.51:0,2,4	0/0:6,0:6:6.02:0,6,93	./.	./.	1/1:17,1:15:3.01:46,3,0	0/1:15,0:15:6.98:7,0,321	0/0:26,0:25:25.76:0,26,405	0/0:17,0:16:0:0,0,0	0/0:11,0:11:13.16:0,13,199	0/0:13,0:12:11.99:0,12,200	0/0:6,0:6:4.51:0,5,23	0/0:15,0:15:12.04:0,12,162	0/0:4,0:4:6.02:0,6,125	0/0:8,0:8:6.02:0,6,129	0/0:7,0:7:9.02:0,9,135	0/0:6,0:7:2.74:0,3,12	1/1:14,10:25:11.77:185,12,0	0/0:11,0:10:12.04:0,12,220	0/0:7,0:7:2.92:0,3,17	1/1:11,0:11:6:64,6,0	0/0:29,0:25:33.10:0,33,617	0/1:14,0:13:15.76:16,0,195	0/0:8,0:7:0.84:0,1,40	0/1:28,0:27:41.78:42,0,679	0/0:16,0:15:27.09:0,27,483	0/0:14,0:14:15.05:0,15,333	0/0:18,0:17:16.46:0,16,242	0/0:6,0:6:15.05:0,15,289
chr10	64879012	.	TG	T	684	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.039;DP=567;FS=3.095;HRun=2;HaplotypeScore=51.2180;InbreedingCoeff=0.9980;MQ=59.98;MQ0=10;MQRankSum=2.915;QD=32.57;ReadPosRankSum=-0.257;VQSLOD=3.1625;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,21:21:60.20:779,60,0	0/0:9,0:9:27.08:0,27,385	0/0:21,0:16:48.10:0,48,631	0/0:35,0:21:60.13:0,60,818	0/0:23,0:22:66.22:0,66,961	0/0:23,0:23:69.23:0,69,1034	0/0:22,0:22:66.22:0,66,973	0/0:30,0:29:87.28:0,87,1269	0/0:20,0:20:60.20:0,60,899	0/0:18,0:17:48.16:0,48,700	0/0:21,0:21:57.19:0,57,853	0/0:17,0:17:48.16:0,48,719	0/0:10,0:10:30.10:0,30,449	0/0:11,0:11:33.10:0,33,477	0/0:22,0:22:63.20:0,63,923	0/0:17,0:17:51.17:0,51,763	0/0:29,0:29:87.29:0,87,1304	0/0:20,0:20:60.20:0,60,897	0/0:30,0:25:66.22:0,66,988	0/0:25,0:25:75.24:0,75,1100	0/0:27,0:27:78.24:0,78,1129	0/0:16,0:16:45.14:0,45,655	0/0:19,0:19:57.19:0,57,851	0/0:21,0:21:63.20:0,63,924	0/0:16,0:16:42.14:0,42,629	0/0:14,0:13:39.13:0,39,584	0/0:15,0:15:45.15:0,45,674	0/0:14,0:14:42.14:0,42,629
chr10	64880351	.	G	GTC	937.06	PASS	AB=1.000;AC=36;AF=0.783;AN=46;BaseQRankSum=1.832;DP=479;FS=1.206;HRun=0;HaplotypeScore=92.8499;InbreedingCoeff=0.1909;MQ=72.80;MQ0=25;MQRankSum=-1.392;QD=2.68;ReadPosRankSum=-2.401;VQSLOD=1.8436;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:14:5.74:30,6,0	1/1:6,0:6:5.94:51,6,0	./.	./.	./.	1/1:19,0:19:10.34:62,10,0	0/0:12,0:12:2.39:0,2,59	1/1:30,0:30:11.93:40,12,0	0/0:16,0:16:2.63:0,3,18	1/1:20,0:20:16.74:112,17,0	./.	0/1:20,0:20:10.46:61,0,10	0/0:13,0:13:2.96:0,3,23	0/1:18,0:18:16.18:16,0,26	0/1:24,0:24:0.09:32,0,0	1/1:10,5:14:0.89:2,1,0	1/1:16,0:14:12.45:99,12,0	1/1:11,0:9:3.48:40,3,0	1/1:23,0:23:13.64:125,14,0	1/1:18,0:18:4.93:38,5,0	1/1:25,0:25:1.32:66,1,0	1/1:14,0:13:3:26,3,0	./.	0/1:17,0:17:4.75:5,0,60	1/1:19,0:18:8.96:71,9,0	1/1:16,0:15:5.84:35,6,0	1/1:16,0:16:12.01:125,12,0	1/1:9,0:8:2.99:24,3,0
chr10	64880612	.	TA	T	1034.64	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=8.768;DP=664;FS=2.536;HRun=2;HaplotypeScore=67.4238;InbreedingCoeff=0.9834;MQ=86.80;MQ0=0;MQRankSum=-3.920;QD=31.35;ReadPosRankSum=1.543;VQSLOD=3.4176;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,32:33:87.28:1130,87,0	0/0:9,0:9:27.09:0,27,403	0/0:20,0:20:54.18:0,54,788	0/0:24,0:24:61.05:0,61,856	0/0:22,0:22:63.21:0,63,941	0/0:24,0:24:69.23:0,69,1034	0/0:25,0:25:72.24:0,72,1078	0/0:33,0:33:96.30:0,96,1398	0/0:22,0:22:66.22:0,66,981	0/0:31,0:31:87.29:0,87,1278	0/0:19,0:19:57.19:0,57,852	0/0:27,0:27:78.25:0,78,1144	0/0:14,0:14:42.14:0,42,625	0/0:30,0:30:87.28:0,87,1282	0/0:35,0:35:99:0,105,1572	0/0:23,0:23:63.21:0,63,942	0/0:20,0:20:54.14:0,54,784	0/0:23,0:23:66.22:0,66,987	0/0:17,0:17:51.17:0,51,764	0/0:23,0:23:63.20:0,63,918	0/0:27,0:27:78.26:0,78,1169	0/0:17,0:17:51.17:0,51,764	0/0:13,0:13:36.11:0,36,519	0/0:37,0:37:99:0,108,1615	0/0:18,0:18:54.18:0,54,810	0/0:35,0:35:99:0,105,1551	0/0:38,0:37:99:0,111,1631	0/0:5,0:5:15.05:0,15,225
chr10	64881976	.	C	CTACAGCAT	1968.29	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=0.847;DP=715;FS=1.919;HRun=0;HaplotypeScore=207.5447;InbreedingCoeff=0.9798;MQ=91.11;MQ0=0;MQRankSum=-6.642;QD=65.61;ReadPosRankSum=-3.845;VQSLOD=2.4569;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,120,3052	0/0:8,0:8:21.07:0,21,566	0/0:32,0:32:73.95:0,74,1492	0/0:26,0:26:63.12:0,63,1469	1/1:8,21:30:57.11:2063,57,0	0/0:16,0:16:42.14:0,42,1064	0/0:27,0:27:66.23:0,66,1674	0/0:42,0:42:99:0,105,2603	0/0:21,0:21:57.20:0,57,1538	0/0:35,0:34:93.32:0,93,2481	0/0:18,0:18:48.16:0,48,1295	0/0:17,0:16:42.14:0,42,1082	0/0:22,0:22:57.18:0,57,1419	0/0:26,0:26:78.27:0,78,2102	0/0:21,0:21:54.18:0,54,1374	0/0:27,0:27:72.23:0,72,1844	0/0:40,0:40:93.32:0,93,2440	0/0:16,0:16:48.15:0,48,1180	0/0:26,0:26:60.21:0,60,1531	0/0:25,0:25:63.22:0,63,1661	0/0:46,0:46:99:0,117,2929	0/0:18,0:17:36.12:0,36,970	0/0:27,0:27:69.24:0,69,1829	0/0:14,0:14:36.12:0,36,937	0/0:13,0:13:30.10:0,30,777	0/0:29,0:29:72.24:0,72,1782	0/0:46,0:46:99:0,129,3378	0/0:5,0:5:15.05:0,15,405
chr10	64882213	.	GA	G	484.73	PASS	AB=0.926;AC=9;AF=0.161;AN=56;BaseQRankSum=2.638;DP=654;FS=2.814;HRun=13;HaplotypeScore=102.4870;InbreedingCoeff=0.1039;MQ=70.70;MQ0=21;MQRankSum=-2.043;QD=2.92;ReadPosRankSum=2.202;VQSLOD=0.6757;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:37,1:40:15.42:365,15,0	0/0:8,0:8:14.97:0,15,127	0/0:79,1:21:4.82:0,5,117	0/0:66,1:25:13.18:0,13,169	0/1:22,1:23:0.11:162,0,0	0/1:16,2:19:25.96:26,0,222	0/0:15,0:15:8.16:0,8,237	0/0:27,1:28:23.61:0,24,393	0/1:10,0:12:12.83:13,0,62	0/1:22,2:23:24.61:25,0,282	0/1:20,1:21:6.50:6,0,225	0/0:15,0:14:24.78:0,25,226	0/0:14,0:14:4.11:0,4,167	0/0:12,1:13:11.79:0,12,243	0/0:17,0:17:10.43:0,10,207	0/0:25,0:25:8.87:0,9,330	0/0:21,0:21:0.70:0,1,268	0/0:24,0:24:41.86:0,42,401	0/1:12,2:14:19.80:20,0,141	0/0:25,0:24:40.81:0,41,427	0/1:11,0:10:0.74:1,0,145	0/0:17,0:16:26.87:0,27,240	0/0:17,0:17:35.07:0,35,270	0/0:9,0:9:15.02:0,15,144	0/0:14,0:14:9.08:0,9,69	0/0:25,0:25:14.59:0,15,353	0/0:32,1:33:4.52:0,5,454	0/0:19,0:18:19.21:0,19,274
chr10	64882228	.	GAA	G	4700.57	PASS	AB=0.827;AC=38;AF=0.679;AN=56;BaseQRankSum=-3.216;DP=634;FS=17.195;HRun=13;HaplotypeScore=95.8564;InbreedingCoeff=0.7371;MQ=67.56;MQ0=20;MQRankSum=0.014;QD=12.74;ReadPosRankSum=5.177;VQSLOD=1.9051;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:36:85.18:0,85,919	1/1:2,3:6:11.72:94,12,0	0/0:76,0:22:3.61:0,4,241	0/0:59,0:18:2.84:0,3,180	0/0:24,0:25:38.32:0,38,428	1/1:6,12:19:29.86:274,30,0	0/1:8,9:17:10.43:154,0,10	0/0:18,0:32:32.10:0,32,240	0/1:12,0:12:12.83:57,0,13	1/1:9,19:26:40.48:471,40,0	1/1:5,16:21:42:402,42,0	1/1:3,10:13:21.49:202,21,0	0/0:11,0:11:23.97:0,24,280	1/1:5,9:15:23.72:216,24,0	1/1:5,10:15:20.98:204,21,0	1/1:6,18:26:32.47:285,32,0	1/1:11,8:18:23.92:224,24,0	1/1:12,13:25:29.66:264,30,0	1/1:7,4:15:24.78:185,25,0	1/1:9,19:27:56.97:546,57,0	1/1:3,6:8:11.99:116,12,0	1/1:5,10:14:8.83:131,9,0	0/0:18,0:18:26.98:0,27,290	0/0:7,0:8:18.03:0,18,209	1/1:3,6:9:2.98:29,3,0	1/1:8,16:24:32.44:363,32,0	1/1:16,15:32:40.98:370,41,0	1/1:7,10:17:11.97:116,12,0
chr10	64887127	.	A	AAT	4448.48	PASS	AB=0.750;AC=51;AF=0.981;AN=52;BaseQRankSum=0.224;DP=120;FS=8.155;HRun=0;HaplotypeScore=46.0738;InbreedingCoeff=-0.1030;MQ=55.78;MQ0=0;MQRankSum=-1.691;QD=38.02;ReadPosRankSum=-0.509;VQSLOD=6.3129;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,0:6:12.02:150,12,0	1/1:1,0:1:3.01:57,3,0	./.	0/1:2,0:2:4.32:36,0,4	1/1:3,2:5:9.03:171,9,0	1/1:6,0:7:21.03:355,21,0	1/1:3,0:2:3.01:54,3,0	1/1:10,0:8:3.01:42,3,0	1/1:7,0:7:18.06:327,18,0	1/1:4,0:3:9.03:170,9,0	1/1:6,0:6:15.05:272,15,0	1/1:1,2:3:3.01:58,3,0	1/1:0,2:2:3.01:60,3,0	1/1:2,0:2:6.02:103,6,0	1/1:6,0:6:18.06:330,18,0	1/1:2,0:2:3.01:57,3,0	1/1:6,1:7:11.89:220,12,0	./.	1/1:1,0:1:2.98:21,3,0	1/1:6,0:7:21.04:364,21,0	1/1:3,1:4:9.03:156,9,0	1/1:1,1:2:3.01:56,3,0	1/1:1,0:1:3.01:56,3,0	1/1:5,0:5:15.01:243,15,0	1/1:4,0:4:9.03:177,9,0	1/1:7,2:9:27.09:510,27,0	1/1:5,1:7:18.06:344,18,0	1/1:1,2:3:3.01:60,3,0
chr10	64887276	.	TAC	T	1409.63	PASS	AB=0.835;AC=32;AF=0.640;AN=50;BaseQRankSum=4.877;DP=462;FS=0.756;HRun=0;HaplotypeScore=66.3572;InbreedingCoeff=0.4114;MQ=69.41;MQ0=10;MQRankSum=0.842;QD=5.38;ReadPosRankSum=2.717;VQSLOD=1.8512;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:33:36.07:0,36,462	1/1:4,1:5:2.90:33,3,0	./.	./.	0/0:9,0:17:3:0,3,26	0/1:15,2:19:66.11:113,0,66	0/1:16,1:18:32.76:67,0,33	0/0:21,0:18:16.06:0,16,102	0/0:19,0:19:14.97:0,15,135	1/1:19,0:19:5.99:51,6,0	0/1:11,4:14:26.97:115,0,27	1/1:5,3:8:3.01:33,3,0	0/0:8,0:8:6.02:0,6,89	1/1:10,3:13:6.02:65,6,0	0/1:11,3:13:1.20:57,0,1	1/1:4,1:5:3.01:33,3,0	1/1:22,16:37:31.76:356,32,0	1/1:9,2:11:3.01:32,3,0	1/1:7,2:9:6.02:65,6,0	1/1:12,1:13:3.01:33,3,0	1/1:16,11:27:12.03:130,12,0	1/1:12,3:15:5.97:53,6,0	0/0:9,0:9:9.03:0,9,134	0/0:28,0:28:38.99:0,39,429	./.	1/1:9,7:16:14.08:132,14,0	1/1:6,2:7:8.86:79,9,0	1/1:5,4:8:11.72:130,12,0
chr10	64887500	.	C	CGTGAGCCTCCT	1052.88	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-2.151;DP=633;FS=17.230;HRun=0;HaplotypeScore=196.7300;InbreedingCoeff=0.9858;MQ=77.33;MQ0=0;MQRankSum=-4.478;QD=43.87;ReadPosRankSum=0.814;VQSLOD=2.0316;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,141,4299	0/0:6,0:6:18.06:0,18,605	0/0:16,0:16:39.13:0,39,1061	0/0:17,0:17:47.83:0,48,1411	1/1:8,13:24:21.07:1145,21,0	0/0:20,0:20:51.18:0,51,1696	0/0:29,0:29:63.22:0,63,2116	0/0:21,0:21:48.10:0,48,1182	0/0:19,0:19:51.15:0,51,1503	0/0:36,0:36:84.26:0,84,2480	0/0:16,0:16:36.12:0,36,1179	0/0:16,0:16:39.13:0,39,1244	0/0:18,0:18:48.16:0,48,1597	0/0:18,0:18:51.16:0,51,1625	0/0:23,0:23:63.17:0,63,1915	0/0:21,0:21:57.15:0,57,1814	0/0:37,0:37:96.30:0,96,3128	0/0:19,0:19:48.14:0,48,1459	0/0:19,0:19:48.16:0,48,1444	0/0:24,0:24:66.23:0,66,2216	0/0:30,0:30:78.23:0,78,2370	0/0:25,0:25:69.24:0,69,2297	0/0:20,0:20:54.17:0,54,1661	0/0:21,0:21:54.19:0,54,1776	0/0:24,0:24:60.20:0,60,1933	0/0:25,0:25:69.24:0,69,2265	0/0:28,0:28:72.25:0,72,2380	0/0:9,0:9:24.08:0,24,806
chr10	64889638	.	GCCTTCGGGGTAACTT	G	131.21	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.186;DP=465;FS=1.988;HRun=0;HaplotypeScore=188.5076;InbreedingCoeff=0.8996;MQ=89.56;MQ0=0;MQRankSum=1.321;QD=9.37;ReadPosRankSum=-2.618;VQSLOD=2.5534;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:40:99:0,102,7151	0/0:7,0:7:21.07:0,21,1513	0/0:27,0:26:63.22:0,63,3300	0/0:17,0:18:45.60:0,46,1909	0/0:14,0:14:42.14:0,42,3042	0/0:11,0:11:30.10:0,30,1906	0/0:21,0:21:60.19:0,60,3943	1/1:9,5:14:12.01:217,12,0	0/0:14,0:14:42.14:0,42,2955	0/0:16,0:16:48.16:0,48,3399	0/0:9,0:9:21.07:0,21,1467	0/0:14,0:14:39.12:0,39,2380	0/0:15,0:15:42.14:0,42,2828	0/0:8,0:8:24.08:0,24,1495	0/0:8,0:8:18.06:0,18,1241	0/0:8,0:8:18.06:0,18,1262	0/0:27,0:27:75.24:0,75,5227	0/0:22,0:22:63.22:0,63,4357	0/0:17,0:17:36.12:0,36,2385	0/0:14,0:14:39.09:0,39,2430	0/0:32,0:31:87.27:0,87,5844	0/0:11,0:11:30.10:0,30,2146	0/0:14,0:14:42.10:0,42,2645	0/0:29,0:29:78.25:0,78,5161	0/0:20,0:20:57.20:0,57,3789	0/0:24,0:24:69.23:0,69,4656	0/0:5,0:5:15.05:0,15,1080	0/0:5,0:5:12.04:0,12,878
chr10	64889740	.	C	CCT	13148.03	PASS	AB=0.571;AC=37;AF=0.661;AN=56;BaseQRankSum=-13.760;DP=497;FS=1.629;HRun=0;HaplotypeScore=65.4749;InbreedingCoeff=0.9077;MQ=76.16;MQ0=7;MQRankSum=-0.679;QD=45.81;ReadPosRankSum=3.714;VQSLOD=6.5507;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,117,1674	1/1:1,5:6:18.06:315,18,0	0/0:30,0:24:40.27:0,40,858	0/0:23,0:20:48.94:0,49,655	0/0:22,0:22:57.19:0,57,810	1/1:0,11:11:33.11:604,33,0	1/1:3,16:18:42.14:769,42,0	0/0:21,0:20:51.12:0,51,689	0/0:19,0:19:48.62:0,49,668	1/1:3,21:25:66.16:1134,66,0	1/1:1,3:4:9.03:165,9,0	1/1:2,22:24:66.23:1203,66,0	0/0:10,0:10:27.09:0,27,386	1/1:0,10:10:27.09:494,27,0	1/1:0,11:11:33.11:599,33,0	0/1:2,6:8:24.92:257,0,25	1/1:0,16:16:45.15:824,45,0	1/1:2,9:11:27.09:494,27,0	1/1:3,14:17:42.14:768,42,0	1/1:0,13:14:39.13:699,39,0	1/1:4,31:35:87.30:1594,87,0	1/1:1,21:24:51.13:934,51,0	0/0:16,0:16:42.13:0,42,585	0/0:25,0:25:72.17:0,72,972	1/1:2,13:14:33.11:604,33,0	1/1:3,18:21:51.17:924,51,0	1/1:2,9:11:27.09:493,27,0	1/1:0,5:5:15.05:275,15,0
chr10	64889776	.	TCACA	T	999.44	PASS	AB=0.810;AC=24;AF=0.522;AN=46;BaseQRankSum=2.670;DP=468;FS=6.616;HRun=0;HaplotypeScore=107.5097;InbreedingCoeff=0.4314;MQ=73.83;MQ0=14;MQRankSum=-0.565;QD=5.26;ReadPosRankSum=-0.603;VQSLOD=1.3589;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:9.03:0,9,205	0/1:3,3:7:8.93:147,0,9	./.	./.	1/1:14,0:22:6:53,6,0	1/1:8,1:9:3.01:46,3,0	0/1:18,3:21:74.94:145,0,75	0/0:18,0:18:3.01:0,3,36	0/0:13,0:17:9.01:0,9,127	1/1:16,2:18:8.99:113,9,0	./.	0/0:18,0:22:22.95:0,23,156	0/0:8,0:8:12.02:0,12,228	1/1:8,0:9:6.01:56,6,0	1/1:8,2:11:9.02:120,9,0	0/0:4,0:7:8.23:0,8,37	0/1:15,2:17:32.50:40,0,32	0/0:10,0:9:17.99:0,18,265	./.	1/1:14,2:16:6.02:92,6,0	./.	1/1:19,1:20:5.80:60,6,0	0/0:12,0:12:12.01:0,12,177	0/0:28,0:28:47.79:0,48,788	1/1:7,3:10:9.03:138,9,0	1/1:13,2:14:6.01:92,6,0	0/1:8,1:10:6.49:40,0,6	1/1:5,0:5:2.97:20,3,0
chr10	64890394	.	G	GT	810.83	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-5.133;DP=640;FS=0.000;HRun=6;HaplotypeScore=59.8172;InbreedingCoeff=0.9971;MQ=86.76;MQ0=0;MQRankSum=-3.734;QD=23.85;ReadPosRankSum=-0.274;VQSLOD=2.9338;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,30:34:72.23:906,72,0	0/0:19,0:19:51.11:0,51,520	0/0:14,0:14:35.27:0,35,390	0/0:30,0:30:53.09:0,53,588	0/0:31,0:31:92.21:0,92,911	0/0:21,0:21:60.14:0,60,612	0/0:18,0:18:51.05:0,51,507	0/0:34,0:34:87.15:0,87,867	0/0:13,0:13:39.09:0,39,398	0/0:28,0:28:78.17:0,78,795	0/0:20,0:20:51.04:0,51,491	0/0:20,0:20:57.07:0,57,559	0/0:10,0:10:24.05:0,24,244	0/0:27,0:27:81.16:0,81,812	0/0:32,0:32:81.13:0,81,802	0/0:26,0:26:69.16:0,69,704	0/0:25,0:25:72.11:0,72,717	0/0:18,0:18:51.06:0,51,508	0/0:13,0:13:30.06:0,30,302	0/0:19,0:19:57.12:0,57,574	0/0:31,0:31:78.02:0,78,751	0/0:23,0:23:63.11:0,63,628	0/0:21,0:21:54.12:0,54,550	0/0:17,0:17:48.07:0,48,471	0/0:15,0:15:38.96:0,39,382	0/0:30,0:30:90.19:0,90,912	0/0:31,0:31:84.12:0,84,836	0/0:20,0:20:57.13:0,57,580
chr10	64891227	.	A	AT	424.68	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-5.214;DP=626;FS=4.797;HRun=10;HaplotypeScore=77.7213;InbreedingCoeff=0.9148;MQ=67.98;MQ0=0;MQRankSum=-1.004;QD=16.99;ReadPosRankSum=-2.470;VQSLOD=3.4393;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,140,1120	0/0:14,0:14:35.90:0,36,289	0/0:17,0:16:27.73:0,28,269	0/0:13,0:11:19.99:0,20,188	0/0:16,0:16:38.85:0,39,307	0/0:15,1:17:9:0,9,269	0/0:26,0:26:71.88:0,72,588	1/1:6,19:25:29.49:519,29,0	0/0:23,1:24:30.94:0,31,461	0/0:29,0:29:29.43:0,29,499	0/0:13,0:14:35.83:0,36,279	0/0:23,0:23:59.90:0,60,488	0/0:21,0:21:38.01:0,38,360	0/0:20,0:21:52.95:0,53,425	0/0:16,0:16:38.93:0,39,317	0/0:17,0:18:49.98:0,50,400	0/0:30,0:33:86.98:0,87,679	0/0:32,0:32:77.85:0,78,633	0/0:16,1:17:13.33:0,13,313	0/0:19,0:19:47.88:0,48,388	0/0:25,1:26:27.91:0,28,433	0/0:26,0:26:32.74:0,33,419	0/0:17,0:17:41.92:0,42,345	0/0:25,1:26:30.91:0,31,457	0/0:13,0:14:29:0,29,227	0/0:34,1:35:71.87:0,72,589	0/0:23,0:24:61.88:0,62,488	0/0:11,0:11:26.85:0,27,212
chr10	64892172	.	C	CT	1056.57	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=2.799;DP=510;FS=2.692;HRun=2;HaplotypeScore=62.3725;InbreedingCoeff=0.5552;MQ=70.86;MQ0=0;MQRankSum=0.417;QD=19.57;ReadPosRankSum=0.100;VQSLOD=3.6143;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,31:32:75.25:1076,75,0	0/0:3,0:3:9.03:0,9,111	0/0:10,0:10:17.07:0,17,147	0/0:12,0:11:3.44:0,3,171	0/1:22,0:22:22.41:86,0,22	0/0:23,0:23:69.16:0,69,802	0/0:15,0:15:45.04:0,45,498	0/0:25,0:25:69.13:0,69,797	0/0:25,0:25:75.14:0,75,840	0/0:21,0:21:60.18:0,60,733	0/0:11,0:11:33.07:0,33,392	0/0:15,0:15:39.11:0,39,470	0/0:14,0:14:31.94:0,32,428	0/0:14,0:14:39.12:0,39,481	0/0:21,0:21:63.16:0,63,753	0/0:24,0:24:71.98:0,72,819	0/0:22,0:22:57.14:0,57,687	0/0:20,0:20:60.17:0,60,728	0/0:28,0:28:81.18:0,81,935	0/0:22,0:22:54.13:0,54,641	0/0:19,0:19:54.17:0,54,667	0/0:10,0:10:30.06:0,30,355	0/0:16,0:16:48.09:0,48,559	0/0:15,0:15:42.13:0,42,519	0/0:13,0:13:36.11:0,36,436	0/0:23,0:23:69.16:0,69,796	0/0:26,0:25:78.23:0,78,951	0/0:9,0:9:27.08:0,27,334
chr10	64892174	.	T	TA	964.40	PASS	AB=0.929;AC=5;AF=0.089;AN=56;BaseQRankSum=2.695;DP=507;FS=2.692;HRun=9;HaplotypeScore=64.4319;InbreedingCoeff=0.6903;MQ=70.86;MQ0=0;MQRankSum=0.907;QD=14.84;ReadPosRankSum=-0.518;VQSLOD=3.7506;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:30:73.29:447,73,0	0/0:3,0:3:9:0,9,78	0/0:8,0:8:8.85:0,9,114	0/1:12,1:12:15.48:15,0,123	1/1:3,19:22:57.15:631,57,0	0/0:23,0:23:56.98:0,57,495	0/0:16,0:16:35.97:0,36,308	0/0:23,0:23:56.97:0,57,495	0/0:25,0:25:53.97:0,54,469	0/0:21,0:21:56.98:0,57,493	0/0:10,0:11:32.03:0,32,266	0/0:14,0:14:35.99:0,36,312	0/0:12,1:13:2.81:0,3,253	0/0:14,0:14:38.99:0,39,339	0/0:20,0:21:59.02:0,59,501	0/0:24,0:24:59.96:0,60,521	0/0:23,0:23:53.99:0,54,469	0/0:21,0:21:56.98:0,57,495	0/0:27,0:28:70.98:0,71,597	0/0:20,0:21:55.98:0,56,467	0/0:19,0:19:53.98:0,54,469	0/0:10,0:11:29.92:0,30,242	0/0:16,0:16:41.99:0,42,365	0/0:14,0:14:41.99:0,42,365	0/0:13,0:13:32.99:0,33,286	0/0:24,0:24:56.98:0,57,493	0/0:27,0:26:74.98:0,75,651	0/0:9,0:9:26.99:0,27,234
chr10	64892633	.	GGT	G	726.81	PASS	AB=0.910;AC=7;AF=0.125;AN=56;BaseQRankSum=7.105;DP=757;FS=10.440;HRun=0;HaplotypeScore=101.1731;InbreedingCoeff=0.4614;MQ=57.88;MQ0=7;MQRankSum=2.076;QD=6.92;ReadPosRankSum=2.432;VQSLOD=2.7367;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,23:28:42.13:525,42,0	0/1:6,1:7:22.48:22,0,183	0/0:34,0:11:21.05:0,21,313	0/0:30,0:10:18.06:0,18,267	1/1:6,13:19:24.07:281,24,0	0/0:19,0:19:48.16:0,48,786	0/1:25,2:27:20.89:21,0,738	0/0:26,0:26:54.56:0,55,789	0/1:22,2:24:18.55:19,0,782	0/0:42,0:42:99:0,105,1619	0/0:20,0:20:45.13:0,45,742	0/0:21,0:21:57.19:0,57,927	0/0:38,0:38:99:0,105,1723	0/0:24,0:24:69.23:0,69,1114	0/0:32,0:32:84.27:0,84,1363	0/0:22,0:22:57.14:0,57,938	0/0:33,0:32:68.32:0,68,1027	0/0:23,0:23:56.55:0,57,859	0/0:29,0:27:56.96:0,57,808	0/0:15,0:15:24.07:0,24,362	0/0:47,0:46:99:0,123,2024	0/0:23,0:23:51.05:0,51,771	0/0:23,0:23:54.17:0,54,851	0/0:25,3:28:0.19:0,0,1049	0/0:29,0:29:69.22:0,69,1112	0/0:50,0:49:99:0,138,2173	0/0:22,0:22:57.09:0,57,930	0/0:20,0:20:48.16:0,48,781
chr10	64892649	.	AGT	A	244.03	PASS	AB=0.651;AC=1;AF=0.018;AN=56;BaseQRankSum=6.357;DP=844;FS=0.000;HRun=0;HaplotypeScore=121.4252;InbreedingCoeff=-0.0193;MQ=52.91;MQ0=29;MQRankSum=-1.365;QD=8.72;ReadPosRankSum=0.079;VQSLOD=2.9208;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:31:52.72:0,53,429	0/0:10,0:10:20.78:0,21,311	0/0:29,0:7:15.05:0,15,241	0/0:30,0:7:17.82:0,18,229	0/1:13,15:27:99:318,0,100	0/0:23,0:23:63.21:0,63,1030	0/0:27,0:27:63.28:0,63,988	0/0:43,1:36:45.22:0,45,1146	0/0:24,0:24:50.96:0,51,1032	0/0:41,0:40:99:0,102,1641	0/0:23,0:23:57.17:0,57,931	0/0:29,0:28:69.71:0,70,1147	0/0:39,0:38:99:0,108,1802	0/0:27,0:26:66.22:0,66,1087	0/0:31,0:30:90.31:0,90,1510	0/0:25,0:25:69.16:0,69,1133	0/0:39,0:38:81.06:0,81,1276	0/0:25,0:25:54.64:0,55,863	0/0:26,0:19:57.19:0,57,951	0/0:13,0:12:27.09:0,27,449	0/0:67,0:64:99:0,165,2725	0/0:27,1:28:24.89:0,25,844	0/0:23,0:22:51.17:0,51,831	0/0:37,0:37:89.52:0,90,1354	0/0:32,0:32:66.23:0,66,1114	0/0:47,0:46:99:0,111,1839	0/0:22,0:21:57.08:0,57,937	0/0:21,0:20:51.17:0,51,833
chr10	64892726	.	AGTGTGTGTGAGAGT	A	1134.01	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=9.473;DP=853;FS=3.047;HRun=0;HaplotypeScore=316.0647;InbreedingCoeff=0.9528;MQ=59.83;MQ0=15;MQRankSum=3.033;QD=27.00;ReadPosRankSum=-3.650;VQSLOD=1.9315;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:42:99:0,108,4199	0/0:6,0:6:11.91:0,12,450	0/0:48,0:18:16.63:0,17,359	0/0:61,0:24:30.27:0,30,669	0/0:46,0:46:89.91:0,90,2605	0/0:25,0:25:41.60:0,42,2116	0/0:30,0:30:75.21:0,75,2542	1/1:10,32:39:89.90:1229,90,0	0/0:22,0:22:63.18:0,63,2890	0/0:26,0:26:68.97:0,69,3035	0/0:17,0:17:51.16:0,51,2976	0/0:25,0:25:57.13:0,57,2749	0/0:21,0:21:47.95:0,48,2265	0/0:25,0:25:52.33:0,52,2488	0/0:23,0:22:41.84:0,42,1789	0/0:25,0:25:63.21:0,63,3130	0/0:46,0:45:82.15:0,82,4266	0/0:25,0:25:58.16:0,58,2553	0/0:22,0:21:55.40:0,55,1806	0/0:15,0:15:42.13:0,42,1838	0/0:96,0:96:99:0,225,10361	0/0:25,0:24:57.18:0,57,3132	0/0:19,0:19:51.16:0,51,2675	0/0:59,0:59:99:0,149,7021	0/0:12,0:12:33.10:0,33,1666	0/0:28,0:27:77.06:0,77,3374	0/0:13,0:13:24.05:0,24,1366	0/0:8,0:8:21.06:0,21,1121
chr10	64892738	.	AGT	A	451.85	PASS	AB=0.662;AC=1;AF=0.018;AN=56;BaseQRankSum=5.600;DP=869;FS=9.998;HRun=0;HaplotypeScore=141.1508;InbreedingCoeff=-0.0201;MQ=57.88;MQ0=19;MQRankSum=0.733;QD=9.61;ReadPosRankSum=1.718;VQSLOD=2.8662;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:85.83:0,86,1356	0/0:5,0:5:15.05:0,15,238	0/0:44,0:14:18.02:0,18,233	0/0:54,0:22:26.54:0,27,317	0/1:23,24:47:99:526,0,293	0/0:21,0:21:45.12:0,45,691	0/0:32,0:32:69.22:0,69,1087	0/0:38,0:33:12.32:0,12,284	0/0:24,0:24:60.17:0,60,936	0/0:23,0:24:60.19:0,60,942	0/0:20,0:20:57.17:0,57,899	0/0:22,0:22:51.06:0,51,832	0/0:22,0:22:60.17:0,60,922	0/0:27,0:27:59.92:0,60,940	0/0:24,0:23:51.02:0,51,767	0/0:27,0:27:75.19:0,75,1175	0/0:40,0:39:79.69:0,80,1393	0/0:25,0:25:62.55:0,63,942	0/0:27,0:23:48.14:0,48,727	0/0:18,0:18:51.17:0,51,824	0/0:106,0:105:99:0,234,3727	0/0:25,0:24:63.20:0,63,1022	0/0:20,0:20:60.19:0,60,964	0/0:62,0:62:99:0,146,2258	0/0:15,0:15:42.13:0,42,665	0/0:35,1:34:58.26:0,58,1372	0/0:12,0:12:30.10:0,30,487	0/0:11,0:11:30.05:0,30,401
chr10	64892808	.	A	AAT	205.30	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.414;DP=975;FS=1.034;HRun=0;HaplotypeScore=153.4830;InbreedingCoeff=0.9981;MQ=58.05;MQ0=6;MQRankSum=-2.681;QD=6.84;ReadPosRankSum=-4.663;VQSLOD=2.3563;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:68.35:0,68,1040	0/0:10,0:10:27.04:0,27,415	0/0:43,0:20:47.52:0,48,555	0/0:48,0:31:37.29:0,37,596	1/1:26,4:30:30.16:300,30,0	0/0:19,0:18:51.16:0,51,805	0/0:36,0:36:99:0,105,1540	0/0:51,0:49:99:0,141,1989	0/0:35,0:35:99:0,99,1531	0/0:33,0:32:99:0,99,1533	0/0:21,0:21:63.13:0,63,898	0/0:42,0:42:99:0,105,1540	0/0:43,0:43:99:0,126,1915	0/0:29,0:29:68.93:0,69,1028	0/0:41,0:40:99:0,111,1781	0/0:35,0:35:84.16:0,84,1272	0/0:34,0:33:90:0,90,1372	0/0:31,0:31:87.21:0,87,1318	0/0:28,0:23:60.17:0,60,901	0/0:27,0:27:78.25:0,78,1242	0/0:110,0:109:99:0,270,4209	0/0:25,0:25:75.22:0,75,1170	0/0:22,0:22:63.13:0,63,896	0/0:63,0:63:99:0,180,2839	0/0:22,0:22:66.18:0,66,989	0/0:36,0:36:99:0,102,1631	0/0:14,0:14:40.38:0,40,636	0/0:11,0:11:33.11:0,33,537
chr10	64892902	.	T	TGTGTGA	177.24	PASS	AB=1.000;AC=5;AF=0.093;AN=54;BaseQRankSum=6.152;DP=1013;FS=20.078;HRun=0;HaplotypeScore=314.4499;InbreedingCoeff=0.3080;MQ=51.23;MQ0=23;MQRankSum=-3.622;QD=1.64;ReadPosRankSum=1.853;VQSLOD=0.5502;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:17,23:40:11.61:226,12,0	0/1:16,0:16:32.69:33,0,96	./.	0/0:41,0:11:2.36:0,2,15	0/1:32,0:31:26.63:27,0,245	0/0:20,0:19:44.98:0,45,551	0/0:39,0:39:74.92:0,75,950	0/0:57,0:50:99:0,105,1421	0/0:34,0:32:73.80:0,74,1472	0/0:57,0:54:85.08:0,85,1327	0/1:18,0:15:3.14:3,0,61	0/0:50,0:49:65.95:0,66,739	0/0:31,0:31:74.89:0,75,1353	0/0:35,0:35:35.58:0,36,400	0/0:38,0:34:33.09:0,33,553	0/0:34,0:34:9.99:0,10,320	0/0:46,0:42:70.15:0,70,898	0/0:22,0:21:23.21:0,23,436	0/0:32,0:22:47.26:0,47,476	0/0:36,0:35:52.27:0,52,690	0/0:86,0:81:50.74:0,51,967	0/0:39,0:39:47.73:0,48,735	0/0:25,0:25:69.18:0,69,1261	0/0:42,0:42:99:0,103,1951	0/0:44,0:42:29.98:0,30,464	0/0:33,0:33:38.94:0,39,919	0/0:23,0:23:26.94:0,27,355	0/0:12,0:12:23.96:0,24,234
chr10	64892918	.	TGA	T	4244.80	PASS	AB=0.796;AC=21;AF=0.375;AN=56;BaseQRankSum=8.471;DP=968;FS=22.858;HRun=0;HaplotypeScore=243.7355;InbreedingCoeff=-0.4891;MQ=48.86;MQ0=24;MQRankSum=-3.492;QD=5.81;ReadPosRankSum=0.532;VQSLOD=3.0445;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:32,1:32:45.56:53,0,46	0/1:7,8:15:55.43:95,0,55	1/1:30,0:3:4.07:12,4,0	0/1:44,0:12:57.28:57,0,118	0/0:25,1:25:14.23:0,14,223	0/0:21,0:19:12.52:0,13,238	0/1:42,5:47:99:260,0,399	0/1:51,8:51:99:233,0,1323	0/0:34,0:32:82.42:0,82,1509	0/1:29,27:55:99:804,0,450	0/0:20,2:19:8.99:0,9,82	0/1:36,5:40:93.64:94,0,264	0/0:26,0:26:78.22:0,78,1372	0/1:33,0:33:99:105,0,235	0/1:16,16:28:99:130,0,278	0/1:27,6:33:31.78:32,0,153	0/1:23,25:45:99:460,0,329	0/1:9,9:17:99:152,0,126	0/1:24,3:20:99:205,0,207	0/1:16,14:29:99:244,0,167	0/1:46,27:69:99:173,0,437	0/0:32,3:35:16.11:0,16,296	0/0:27,0:27:75.26:0,75,1414	0/0:47,0:47:99:0,126,2150	0/1:44,0:42:99:105,0,229	0/1:21,14:35:99:609,0,256	0/1:10,11:21:39.87:287,0,40	0/1:4,6:10:60.21:136,0,60
chr10	64892922	.	TGTGA	T	3561.15	PASS	AB=0.997;AC=27;AF=0.482;AN=56;BaseQRankSum=-0.058;DP=960;FS=8.499;HRun=0;HaplotypeScore=269.8868;InbreedingCoeff=-0.1918;MQ=49.38;MQ0=22;MQRankSum=0.323;QD=4.68;ReadPosRankSum=-10.415;VQSLOD=-0.6534;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:35,0:34:24.14:24,0,91	1/1:14,1:15:12.34:150,12,0	0/0:38,0:7:15.04:0,15,196	0/1:43,0:14:21.41:21,0,320	0/0:23,0:22:16.10:0,16,134	0/1:18,0:16:99:108,0,188	0/1:43,0:43:70.80:247,0,71	0/1:54,0:46:99:450,0,812	0/0:37,0:36:68.88:0,69,1842	0/1:51,1:51:16.91:406,0,17	0/1:23,0:20:2.17:10,0,2	0/1:42,0:41:55.21:55,0,269	0/0:27,0:27:72.19:0,72,1623	0/1:31,0:31:81.33:254,0,81	0/1:30,0:26:30.19:54,0,30	0/1:33,0:33:0.02:178,0,0	0/1:50,0:46:19.01:134,0,19	1/1:18,0:17:13.56:121,14,0	0/1:31,0:23:13.60:239,0,14	1/1:26,0:25:2.80:100,3,0	0/1:72,0:68:38.56:227,0,39	0/1:34,0:34:70.56:71,0,357	0/0:26,0:26:75.21:0,75,1847	0/0:47,0:47:99:0,123,2625	0/1:43,0:41:99:101,0,246	0/1:35,1:36:12.62:308,0,13	1/1:19,2:21:9.06:163,9,0	1/1:11,0:11:8.67:138,9,0
chr10	64892924	.	TGA	T	7876.76	PASS	AB=0.974;AC=36;AF=0.643;AN=56;BaseQRankSum=6.306;DP=964;FS=11.433;HRun=0;HaplotypeScore=233.6917;InbreedingCoeff=0.3310;MQ=49.46;MQ0=21;MQRankSum=-1.432;QD=10.34;ReadPosRankSum=-5.169;VQSLOD=2.5469;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:34,1:34:40.33:75,0,40	1/1:8,7:15:14.76:145,15,0	0/0:39,0:7:15.48:0,15,194	0/1:46,0:17:43.75:44,0,271	0/0:22,1:22:14.09:0,14,100	0/1:18,0:16:68.07:133,0,68	0/1:40,1:41:15.19:455,0,15	0/1:48,8:48:99:323,0,694	0/0:36,1:36:49.16:0,49,1330	1/1:49,2:50:99:1230,104,0	1/1:6,17:20:5.73:40,6,0	0/1:43,0:42:69.32:245,0,69	0/0:28,0:28:69.37:0,69,1230	1/1:32,0:32:1.99:287,2,0	1/1:30,1:27:28.71:290,29,0	1/1:25,6:31:14.66:182,15,0	1/1:49,1:46:76.04:817,76,0	1/1:20,0:19:41.35:391,41,0	1/1:31,0:24:36.06:420,36,0	1/1:24,3:26:37.64:413,38,0	1/1:67,1:65:26.82:519,27,0	0/1:31,1:32:99:104,0,141	0/0:27,0:27:66.29:0,66,1325	0/0:48,0:48:99:0,103,1980	0/1:44,0:42:69.74:204,0,70	1/1:35,0:35:56.40:889,56,0	1/1:21,1:22:36.16:417,36,0	1/1:10,1:11:24.01:254,24,0
chr10	64895851	.	T	TGA	261.85	PASS	AC=10;AF=0.714;AN=14;BaseQRankSum=2.843;DP=223;FS=21.206;HRun=0;HaplotypeScore=24.0898;MQ=25.32;MQ0=196;MQRankSum=-1.813;QD=7.48;ReadPosRankSum=2.843;VQSLOD=1.4303;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:14,1:1:3.01:58,3,0	./.	0/0:19,0:6:15.04:0,15,199	0/0:19,0:2:3.01:0,3,45	1/1:2,1:1:3.01:58,3,0	./.	./.	./.	./.	1/1:2,2:2:6.02:115,6,0	./.	./.	./.	./.	./.	1/1:10,1:1:3.01:58,3,0	./.	./.	./.	./.	./.	./.	./.	./.	1/1:1,1:1:3.01:58,3,0	./.	./.	./.
chr10	64895946	.	T	TCA	2249.59	PASS	AC=38;AF=1.000;AN=38;DP=162;FS=0.000;HRun=0;HaplotypeScore=65.8464;InbreedingCoeff=-0.1055;MQ=20.10;MQ0=81;QD=18.00;VQSLOD=3.2230;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,4:5:9.03:168,9,0	./.	./.	./.	1/1:4,4:7:6.02:112,6,0	1/1:5,6:6:11.89:223,12,0	1/1:3,4:5:6.02:112,6,0	1/1:5,1:2:5.98:60,6,0	1/1:7,2:5:3.01:56,3,0	1/1:5,2:2:6.02:112,6,0	1/1:3,4:5:9.03:168,9,0	1/1:3,2:2:6.02:112,6,0	./.	1/1:0,1:1:3.01:56,3,0	./.	1/1:7,1:2:3.01:56,3,0	1/1:2,5:5:8.90:168,9,0	1/1:6,1:2:6:79,6,0	1/1:4,3:5:15.02:229,15,0	1/1:0,5:4:12.04:224,12,0	./.	./.	./.	1/1:1,2:2:2.94:56,3,0	1/1:2,5:6:6.02:112,6,0	1/1:2,2:2:6.02:112,6,0	1/1:3,2:2:6.02:112,6,0	./.
chr10	64895965	.	A	AT	953.58	PASS	AB=1.000;AC=51;AF=0.944;AN=54;BaseQRankSum=1.415;DP=131;FS=23.916;HRun=0;HaplotypeScore=70.7527;InbreedingCoeff=0.2320;MQ=50.79;MQ0=28;MQRankSum=-0.068;QD=7.63;ReadPosRankSum=3.110;VQSLOD=1.7062;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,4:4:9.99:37,10,0	1/1:0,2:2:5.49:24,5,0	0/0:6,0:3:7.38:0,7,40	0/1:7,0:4:12.14:37,0,12	1/1:0,7:7:18.25:75,18,0	1/1:3,8:8:22.11:100,22,0	1/1:0,4:4:10.55:42,11,0	1/1:2,4:3:8.77:51,9,0	1/1:2,5:5:13.44:56,13,0	1/1:1,2:2:5.75:30,6,0	1/1:1,6:6:14.07:49,14,0	1/1:1,3:3:8.02:33,8,0	1/1:1,1:1:2.68:11,3,0	1/1:0,1:1:2.50:9,2,0	1/1:3,2:2:5.19:20,5,0	1/1:2,3:4:8.23:36,8,0	1/1:2,4:6:10.89:51,11,0	1/1:3,3:3:8.25:39,8,0	1/1:0,4:4:11.77:72,12,0	1/1:0,5:4:10.83:46,11,0	1/1:1,1:1:2.37:8,2,0	./.	1/1:0,4:4:10.11:38,10,0	1/1:0,2:2:1.84:7,2,0	1/1:0,8:8:21.96:96,22,0	1/1:1,2:2:5.75:30,6,0	1/1:1,4:4:9.42:37,9,0	1/1:1,2:2:5.54:25,6,0
chr10	64895967	.	TC	T	805.39	PASS	AC=50;AF=0.926;AN=54;BaseQRankSum=0.702;DP=130;FS=17.386;HRun=1;HaplotypeScore=73.0519;InbreedingCoeff=0.4356;MQ=56.42;MQ0=22;MQRankSum=-0.581;QD=6.83;ReadPosRankSum=3.350;VQSLOD=-0.7274;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,4:5:11.67:74,12,0	1/1:0,2:2:4.74:15,5,0	0/0:5,0:3:4.64:0,5,34	0/0:7,0:5:13.31:0,13,63	1/1:0,7:7:14.44:44,14,0	1/1:3,8:8:17.48:56,17,0	1/1:0,4:4:8.26:25,8,0	1/1:4,4:5:11.02:60,11,0	1/1:2,5:5:10.89:35,11,0	1/1:1,2:2:4.99:19,5,0	1/1:1,6:6:10.36:55,10,0	1/1:1,3:3:5.89:18,6,0	1/1:1,1:1:2.22:7,2,0	1/1:0,1:1:1.55:4,2,0	1/1:1,2:2:4.07:12,4,0	1/1:2,3:4:9.76:43,10,0	1/1:1,5:6:12.73:55,13,0	1/1:2,3:3:8:53,8,0	1/1:0,4:4:10.98:49,11,0	1/1:1,5:5:11.26:50,11,0	1/1:1,1:1:3.01:36,3,0	./.	1/1:0,4:4:9.45:55,9,0	1/1:0,2:2:1.24:3,1,0	1/1:0,8:8:18.30:59,18,0	1/1:1,2:2:4.99:19,5,0	1/1:1,4:4:9.14:61,9,0	1/1:1,2:2:4.59:15,5,0
chr10	64896319	.	AATC	A	1423.17	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.827;DP=554;FS=4.436;HRun=0;HaplotypeScore=94.2443;InbreedingCoeff=0.9767;MQ=84.92;MQ0=0;MQRankSum=-0.493;QD=35.58;ReadPosRankSum=2.701;VQSLOD=4.3619;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,37:40:93.32:1518,93,0	0/0:7,0:7:15.52:0,16,321	0/0:19,0:18:44:0,44,919	0/0:18,0:18:45.21:0,45,929	0/0:26,0:26:69.24:0,69,1540	0/0:17,0:17:48.16:0,48,1066	0/0:31,0:31:60.19:0,60,1297	0/0:20,0:20:51.16:0,51,1098	0/0:14,0:14:42.14:0,42,933	0/0:21,0:21:63.22:0,63,1408	0/0:12,0:12:36.08:0,36,741	0/0:23,0:23:66.23:0,66,1447	0/0:19,0:19:51.17:0,51,1139	0/0:17,0:17:51.18:0,51,1133	0/0:22,0:22:60.21:0,60,1328	0/0:20,0:20:30.10:0,30,670	0/0:32,0:32:42.14:0,42,938	0/0:18,0:18:54.16:0,54,1161	0/0:18,0:18:48.16:0,48,1034	0/0:9,0:9:21.07:0,21,454	0/0:30,0:30:84.29:0,84,1838	0/0:8,0:8:21.07:0,21,428	0/0:14,0:14:39.13:0,39,840	0/0:34,0:33:87.30:0,87,1922	0/0:10,0:10:30.10:0,30,663	0/0:22,0:22:66.23:0,66,1452	0/0:18,0:18:33.07:0,33,693	0/0:15,0:15:39.13:0,39,851
chr10	64896365	.	TGTGC	T	4666.83	PASS	AB=1.000;AC=37;AF=0.661;AN=56;BaseQRankSum=-0.605;DP=519;FS=4.522;HRun=0;HaplotypeScore=103.1491;InbreedingCoeff=0.8331;MQ=65.46;MQ0=15;MQRankSum=-2.507;QD=15.15;ReadPosRankSum=1.858;VQSLOD=4.5176;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:38:71.66:0,72,564	1/1:1,9:10:15.31:215,15,0	0/0:26,0:12:21.65:0,22,233	0/0:26,0:14:32.04:0,32,319	0/0:16,0:16:44.57:0,45,325	1/1:15,0:15:38.96:353,39,0	1/1:2,18:20:3.01:56,3,0	0/0:22,0:22:34.75:0,35,294	0/0:19,0:19:44.43:0,44,573	1/1:18,0:17:45.85:406,46,0	0/1:10,0:10:5.93:128,0,6	1/1:13,2:15:33.31:321,33,0	0/0:18,0:17:37.74:0,38,474	1/1:19,0:17:35.94:373,36,0	1/1:17,2:19:45.89:440,46,0	1/1:1,15:16:6.49:113,6,0	1/1:1,23:24:9.92:172,10,0	1/1:11,3:14:29.99:348,30,0	1/1:12,0:12:30.21:241,30,0	1/1:0,14:14:2.97:20,3,0	1/1:34,0:33:71.80:624,72,0	1/1:0,10:10:5.79:72,6,0	0/0:14,0:14:38.61:0,39,471	0/0:31,0:31:83.59:0,84,1341	1/1:9,0:9:24.01:252,24,0	1/1:6,17:23:11.05:263,11,0	1/1:3,16:19:12.46:168,12,0	1/1:7,0:7:14.33:101,14,0
chr10	64896957	.	AGGGGTT	A	1929.48	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=8.646;DP=595;FS=1.625;HRun=0;HaplotypeScore=142.7787;InbreedingCoeff=0.9446;MQ=88.48;MQ0=0;MQRankSum=-8.119;QD=53.60;ReadPosRankSum=0.158;VQSLOD=3.7297;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,31:36:90.29:2024,90,0	0/0:10,0:10:30.10:0,30,1098	0/0:24,0:24:66.22:0,66,2090	0/0:21,0:21:60.15:0,60,1791	0/0:30,0:30:90.25:0,90,3142	0/0:17,0:17:48.16:0,48,1709	0/0:28,0:28:84.29:0,84,3008	0/0:25,0:25:72.25:0,72,2547	0/0:20,0:20:60.19:0,60,2025	0/0:23,0:23:69.23:0,69,2295	0/0:23,0:23:66.21:0,66,2313	0/0:11,0:11:33.10:0,33,1124	0/0:31,0:31:93.32:0,93,3385	0/0:16,0:16:48.15:0,48,1675	0/0:16,0:16:48.16:0,48,1743	0/0:23,0:23:69.23:0,69,2436	0/0:25,0:25:69.14:0,69,2229	0/0:17,0:17:51.18:0,51,1860	0/0:19,0:19:57.20:0,57,1989	0/0:20,0:20:60.21:0,60,2189	0/0:25,0:25:69.24:0,69,2450	0/0:16,0:16:48.16:0,48,1706	0/0:18,0:18:54.17:0,54,1893	0/0:26,0:26:78.24:0,78,2604	0/0:26,0:26:69.24:0,69,2470	0/0:26,0:26:78.22:0,78,2764	0/0:20,0:20:54.19:0,54,1969	0/0:3,0:3:9.03:0,9,330
chr10	64897056	.	C	CATTAATTAATTA	13692.83	PASS	AB=0.846;AC=37;AF=0.771;AN=48;BaseQRankSum=-3.487;DP=423;FS=3.132;HRun=0;HaplotypeScore=126.3617;InbreedingCoeff=0.7268;MQ=70.91;MQ0=1;MQRankSum=-6.933;QD=43.06;ReadPosRankSum=-2.966;VQSLOD=4.0951;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:63.22:0,63,2187	1/1:3,3:6:9.03:528,9,0	./.	./.	1/1:25,0:25:18.06:820,18,0	1/1:18,11:29:51.18:2755,51,0	./.	1/1:34,0:34:21.89:612,22,0	0/0:17,0:17:36.12:0,36,1253	1/1:14,3:17:12.04:456,12,0	1/1:8,3:12:12.04:493,12,0	1/1:13,0:13:6.01:99,6,0	0/0:13,0:13:15.05:0,15,496	1/1:10,2:11:9.03:467,9,0	1/1:7,0:7:6.02:267,6,0	1/1:6,2:8:9.03:468,9,0	1/1:10,4:14:18.95:990,19,0	1/1:6,5:11:18.06:1027,18,0	1/1:20,2:22:12.04:513,12,0	1/1:17,7:25:24.05:938,24,0	./.	1/1:9,1:10:3.01:176,3,0	0/0:13,0:13:21.06:0,21,617	0/0:7,0:7:15.05:0,15,486	1/1:13,6:19:9.03:522,9,0	0/1:18,4:22:89.36:416,0,89	1/1:14,6:20:27.09:1308,27,0	1/1:8,2:12:15.05:837,15,0
chr10	64897062	.	T	TTAATTAATTAAC	11552.60	PASS	AB=1.000;AC=21;AF=0.404;AN=52;BaseQRankSum=-1.965;DP=408;FS=6.793;HRun=0;HaplotypeScore=125.9779;InbreedingCoeff=-0.5164;MQ=62.12;MQ0=1;MQRankSum=-7.090;QD=36.33;ReadPosRankSum=0.918;VQSLOD=3.7668;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:66.18:0,66,2287	0/1:4,0:4:9.91:460,0,10	./.	./.	1/1:2,19:30:29.79:990,30,0	0/1:29,0:29:75.74:2365,0,76	0/0:2,0:2:5.92:0,6,42	0/1:36,0:36:99:258,0,344	0/0:15,0:15:39.13:0,39,1323	0/1:13,0:13:99:337,0,117	0/1:10,0:10:81.94:391,0,82	0/1:11,0:11:23.94:24,0,126	0/0:14,0:14:35.79:0,36,707	0/1:11,0:10:43.93:395,0,44	0/1:8,0:8:61.85:218,0,62	0/1:7,0:7:29.94:398,0,30	0/1:14,0:14:47.26:996,0,47	0/1:12,0:12:13.91:886,0,14	0/1:23,0:23:99:381,0,206	0/1:23,0:23:99:742,0,126	0/1:8,0:8:25.04:25,0,68	0/1:9,0:9:84.93:141,0,85	0/0:15,0:15:36.05:0,36,809	0/0:7,0:7:18.05:0,18,551	0/1:18,0:18:99:431,0,143	0/1:19,0:19:99:309,0,206	0/1:20,0:20:99:1092,0,114	0/1:13,0:13:88.88:715,0,89
chr10	64899476	.	GT	G	17698.69	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=12.935;DP=708;FS=0.923;HRun=1;HaplotypeScore=68.9781;InbreedingCoeff=0.9974;MQ=80.18;MQ0=0;MQRankSum=-3.676;QD=37.82;ReadPosRankSum=5.410;VQSLOD=5.1142;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:57:99:0,172,2670	1/1:0,13:13:33.11:451,33,0	0/0:24,0:24:69.21:0,69,1031	0/0:18,0:18:47.29:0,47,712	0/0:12,0:12:36.12:0,36,571	1/1:0,20:20:45.15:628,45,0	1/1:0,25:25:69.23:964,69,0	0/0:32,0:32:96.27:0,96,1407	0/0:14,0:14:42.13:0,42,640	1/1:0,26:26:75.25:1032,75,0	1/1:0,21:21:63.21:875,63,0	1/1:0,31:31:87.29:1208,87,0	0/0:24,0:24:72.25:0,72,1143	1/1:0,28:28:84.28:1174,84,0	1/1:0,24:24:69.23:964,69,0	1/1:1,29:30:33.34:1041,33,0	1/1:0,33:33:87.29:1216,87,0	1/1:0,35:35:99:1384,99,0	1/1:0,22:22:66.20:903,66,0	1/1:0,14:14:39.13:545,39,0	1/1:0,53:53:99:1803,129,0	1/1:0,20:20:48.16:660,48,0	0/0:25,0:25:72.22:0,72,1104	0/0:34,0:34:99:0,102,1606	1/1:0,21:21:54.18:754,54,0	1/1:0,23:23:69.23:964,69,0	1/1:0,24:24:66.22:922,66,0	1/1:0,5:5:15.05:210,15,0
chr10	64900409	.	TTCTCTCTC	T	1876.08	PASS	AB=0.957;AC=37;AF=0.740;AN=50;BaseQRankSum=3.571;DP=502;FS=0.983;HRun=0;HaplotypeScore=117.1260;InbreedingCoeff=0.4761;MQ=73.33;MQ0=14;MQRankSum=-0.246;QD=6.11;ReadPosRankSum=1.968;VQSLOD=2.0452;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:38:33.05:0,33,833	./.	./.	./.	0/1:21,0:22:21.98:25,0,22	1/1:9,0:16:3.01:56,3,0	1/1:14,0:18:3.01:56,3,0	0/0:33,0:33:6.86:0,7,42	0/0:8,0:8:6:0,6,99	1/1:8,4:12:9.98:150,10,0	1/1:9,0:10:3.01:53,3,0	1/1:6,0:15:12.04:224,12,0	0/0:12,0:12:6.91:0,7,233	1/1:7,0:12:3.01:56,3,0	1/1:10,6:16:15.01:247,15,0	1/1:9,4:12:5.16:112,5,0	1/1:17,2:19:11.55:234,12,0	1/1:13,6:19:3.01:74,3,0	1/1:18,5:22:8.98:122,9,0	1/1:10,4:14:8.93:93,9,0	1/1:14,0:14:9.02:154,9,0	1/1:9,0:18:3.48:42,3,0	0/0:14,0:15:6.02:0,6,100	0/0:12,0:19:9.03:0,9,176	1/1:12,0:20:5.95:58,6,0	1/1:19,2:19:3.12:60,3,0	1/1:7,6:12:3.01:74,3,0	1/1:8,0:8:6.02:143,6,0
chr10	64900465	.	C	CT	319.08	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.321;DP=476;FS=4.159;HRun=6;HaplotypeScore=65.3653;InbreedingCoeff=0.8044;MQ=50.68;MQ0=24;MQRankSum=-3.260;QD=18.77;ReadPosRankSum=-4.652;VQSLOD=2.4904;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:65.36:0,65,670	0/0:6,0:6:18.04:0,18,182	0/0:18,0:2:3.01:0,3,31	0/0:15,0:4:11.23:0,11,94	1/1:1,16:17:39.02:414,39,0	0/0:14,0:14:24.05:0,24,241	0/0:23,0:22:60.13:0,60,604	0/0:16,0:14:32.99:0,33,314	0/0:8,0:8:24.05:0,24,244	0/0:12,0:11:21.05:0,21,214	0/0:13,0:12:33.08:0,33,337	0/0:15,0:15:30.06:0,30,305	0/0:12,0:12:23.70:0,24,244	0/0:14,0:14:33.07:0,33,334	0/0:16,0:14:33.07:0,33,336	0/0:10,0:10:27.06:0,27,275	0/0:27,0:24:54.07:0,54,548	0/0:29,0:29:54.11:0,54,549	0/0:24,0:22:51.06:0,51,495	0/0:16,0:15:26.76:0,27,274	0/0:15,0:14:36.04:0,36,355	0/0:18,0:17:30.07:0,30,305	0/0:18,0:18:44.99:0,45,446	0/0:22,0:21:36.08:0,36,366	0/0:19,0:16:24.03:0,24,235	0/0:16,0:13:30.04:0,30,294	0/0:21,0:20:38.76:0,39,377	0/0:12,0:9:21.05:0,21,214
chr10	64900934	.	G	GA	9251.92	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=18.397;DP=649;FS=10.976;HRun=3;HaplotypeScore=301.7028;InbreedingCoeff=0.9860;MQ=81.56;MQ0=0;MQRankSum=-17.676;QD=20.03;ReadPosRankSum=4.685;VQSLOD=1.8792;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:25,16:41:84.13:862,84,0	1/1:8,1:9:17.75:157,18,0	0/0:31,0:31:84.17:0,84,965	0/0:29,0:29:87.22:0,87,1000	1/1:18,1:19:35.97:337,36,0	1/1:18,3:21:48.01:430,48,0	1/1:19,7:26:48.04:467,48,0	1/1:25,0:25:56.21:446,56,0	0/0:38,0:38:99:0,105,1259	1/1:25,4:29:70:684,70,0	1/1:14,3:17:39:362,39,0	1/1:26,4:30:71.73:652,72,0	0/0:27,0:27:81.23:0,81,959	1/1:25,0:25:53.92:462,54,0	1/1:18,3:21:48.02:444,48,0	1/1:14,4:18:42.03:393,42,0	1/1:16,1:17:32.90:301,33,0	1/1:22,1:23:35.98:332,36,0	1/1:13,6:19:42.02:403,42,0	1/1:21,0:21:50.97:450,51,0	1/1:11,6:17:30.52:319,31,0	1/1:15,1:16:26.98:241,27,0	0/0:29,0:29:84.26:0,84,1007	0/0:33,0:33:99:0,99,1172	1/1:15,1:15:36.01:325,36,0	1/1:19,6:25:63.08:617,63,0	1/1:21,2:23:54:487,54,0	1/1:4,0:4:9:81,9,0
chr10	64900936	.	A	AAAGGTGCCT	28073.74	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=14.291;DP=643;FS=9.624;HRun=0;HaplotypeScore=358.3285;InbreedingCoeff=0.9890;MQ=83.51;MQ0=0;MQRankSum=-18.505;QD=61.97;ReadPosRankSum=2.669;VQSLOD=3.8373;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:40,0:40:90.25:2695,90,0	1/1:8,0:8:13.80:184,14,0	0/0:32,0:32:89.95:0,90,2406	0/0:31,0:31:90.25:0,90,2528	1/1:19,0:19:42.02:1044,42,0	1/1:21,0:21:57.06:1245,57,0	1/1:26,0:26:69.21:2038,69,0	1/1:14,8:23:69.23:2227,69,0	0/0:37,0:37:99:0,105,3215	1/1:29,0:29:81.20:1883,81,0	1/1:17,0:17:38.93:757,39,0	1/1:30,0:30:83.40:1807,83,0	0/0:27,0:27:81.28:0,81,2508	1/1:24,0:24:71.94:1287,72,0	1/1:21,0:21:63.15:1419,63,0	1/1:17,0:17:51.13:1388,51,0	1/1:15,2:17:36.09:846,36,0	1/1:16,5:22:23.53:863,24,0	1/1:18,0:18:51.14:1601,51,0	1/1:21,0:21:59.78:784,60,0	1/1:17,0:17:30.97:730,31,0	1/1:16,0:16:45.07:1099,45,0	0/0:29,0:29:87.28:0,87,2656	0/0:34,0:34:99:0,99,3033	1/1:16,0:15:42.05:638,42,0	1/1:24,0:24:72.20:1789,72,0	1/1:23,0:23:66.16:1550,66,0	1/1:4,0:4:12.03:199,12,0
chr10	64900937	.	AGATAAC	A	21526.15	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=18.673;DP=547;FS=9.080;HRun=0;HaplotypeScore=291.6879;InbreedingCoeff=0.9863;MQ=91.30;MQ0=0;MQRankSum=-18.385;QD=60.64;ReadPosRankSum=5.504;VQSLOD=3.9043;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,19:34:84.29:1665,84,0	1/1:1,5:6:18.06:389,18,0	0/0:32,0:32:93.15:0,93,2348	0/0:34,0:34:99:0,102,2716	1/1:1,13:14:36.08:691,36,0	1/1:4,13:17:48.16:1088,48,0	1/1:7,9:16:48.16:969,48,0	1/1:8,10:18:54.19:1212,54,0	0/0:36,0:36:99:0,108,3457	1/1:6,20:26:65.75:1603,66,0	1/1:4,10:14:39.13:836,39,0	1/1:5,19:24:72.24:1577,72,0	0/0:27,0:27:81.28:0,81,2816	1/1:1,16:18:54.18:1248,54,0	1/1:4,12:16:48.16:1052,48,0	1/1:5,9:14:42.13:889,42,0	1/1:5,8:13:33.11:712,33,0	1/1:6,10:16:36.12:830,36,0	1/1:8,7:15:42.14:835,42,0	1/1:0,17:17:51.13:1120,51,0	1/1:6,7:13:33.11:597,33,0	1/1:1,8:9:27.09:600,27,0	0/0:29,0:29:87.30:0,87,2919	0/0:34,0:34:99:0,102,3445	1/1:2,10:12:36.11:777,36,0	1/1:6,15:21:63.21:1389,63,0	1/1:3,16:19:54.19:1232,54,0	1/1:0,3:3:9.03:216,9,0
chr10	64900940	.	TAACA	T	12486.52	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=18.932;DP=532;FS=9.161;HRun=0;HaplotypeScore=298.2080;InbreedingCoeff=0.9842;MQ=92.08;MQ0=0;MQRankSum=-18.683;QD=36.94;ReadPosRankSum=6.363;VQSLOD=3.5878;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:20,11:31:84.17:1020,84,0	1/1:5,0:5:15.03:188,15,0	0/0:34,0:34:96.05:0,96,2519	0/0:32,0:32:96.22:0,96,2314	1/1:13,1:14:33.09:391,33,0	1/1:13,3:16:48.15:629,48,0	1/1:10,4:15:45.12:571,45,0	1/1:18,0:18:54.18:768,54,0	0/0:34,0:34:99:0,102,2840	1/1:24,2:26:72.18:966,72,0	1/1:11,3:14:39.12:494,39,0	1/1:20,3:23:69.15:860,69,0	0/0:29,0:29:87.30:0,87,2454	1/1:18,0:18:54.10:680,54,0	1/1:13,3:16:48.15:626,48,0	1/1:9,4:13:39.12:507,39,0	1/1:11,1:12:33.11:440,33,0	1/1:15,1:16:36.12:517,36,0	1/1:8,6:14:39.10:499,39,0	1/1:17,0:17:45.61:586,46,0	1/1:7,2:9:23.56:269,24,0	1/1:8,1:9:27.08:340,27,0	0/0:30,0:30:90.31:0,90,2531	0/0:35,0:35:99:0,105,2933	1/1:10,1:11:33.11:437,33,0	1/1:16,4:20:60.16:828,60,0	1/1:16,2:18:54.17:737,54,0	1/1:3,0:3:9.03:134,9,0
chr10	64900947	.	TA	T	3811.92	PASS	AB=0.586;AC=38;AF=0.679;AN=56;BaseQRankSum=18.631;DP=498;FS=10.721;HRun=1;HaplotypeScore=285.0832;InbreedingCoeff=0.4726;MQ=91.64;MQ0=0;MQRankSum=-15.263;QD=12.34;ReadPosRankSum=11.360;VQSLOD=0.5909;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:11,18:30:84.30:152,0,84	1/1:1,4:5:14.19:83,14,0	0/0:29,0:29:84.26:0,84,1318	0/0:29,0:29:85.80:0,86,1274	0/1:1,13:14:30.15:81,0,30	1/1:3,13:16:11.57:207,12,0	0/1:5,9:14:28.43:125,0,28	1/1:0,10:10:29.80:212,30,0	0/0:34,0:34:99:0,102,1629	1/1:3,20:23:16.88:346,17,0	0/1:3,10:13:0.54:124,0,1	1/1:3,19:22:32.27:293,32,0	0/0:33,0:33:99:0,99,1553	1/1:1,16:17:49.36:289,49,0	1/1:3,12:15:6.25:179,6,0	1/1:4,9:13:3.61:136,4,0	1/1:1,8:9:12.24:121,12,0	1/1:2,9:11:15.26:177,15,0	0/1:6,7:13:34.29:111,0,34	1/1:0,15:15:38.45:253,38,0	0/1:2,7:9:4.29:74,0,4	1/1:1,8:9:2.45:100,2,0	0/0:29,0:29:87.27:0,87,1345	0/0:35,0:35:99:0,105,1627	1/1:1,10:11:9.66:144,10,0	1/1:4,15:19:31.24:289,31,0	1/1:2,15:18:22.88:256,23,0	1/1:0,3:3:8.89:58,9,0
chr10	64900949	.	GATAA	G	6200.92	PASS	AB=0.583;AC=36;AF=0.643;AN=56;BaseQRankSum=18.669;DP=501;FS=15.337;HRun=0;HaplotypeScore=306.1280;InbreedingCoeff=0.3442;MQ=93.46;MQ0=0;MQRankSum=-16.047;QD=19.81;ReadPosRankSum=11.468;VQSLOD=2.8295;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:12,18:30:65.34:283,0,65	1/1:0,5:5:15.03:146,15,0	0/0:33,0:33:96.32:0,96,2419	0/0:27,0:28:78.27:0,78,2160	0/1:2,13:15:48.39:138,0,48	1/1:3,13:16:12.21:343,12,0	0/1:5,9:14:27.80:222,0,28	1/1:0,10:10:30.06:297,30,0	0/0:33,0:33:99:0,99,2773	0/1:4,20:24:10.32:490,0,10	0/1:4,10:14:13.22:220,0,13	1/1:3,19:22:34.46:533,34,0	0/0:32,0:32:96.32:0,96,2649	1/1:1,16:17:51.09:501,51,0	1/1:3,12:15:7.22:310,7,0	1/1:4,9:13:4.31:231,4,0	0/1:2,8:10:3.64:176,0,4	1/1:1,10:11:26.21:288,26,0	0/1:6,7:13:44.18:173,0,44	1/1:0,15:15:43.31:407,43,0	0/1:2,7:9:11.99:96,0,12	1/1:1,8:9:3.56:183,4,0	0/0:27,0:27:81.28:0,81,2298	0/0:35,0:35:99:0,105,2921	1/1:1,10:11:10.70:242,11,0	1/1:4,15:19:31.69:420,32,0	1/1:3,15:18:24.38:414,24,0	1/1:0,3:3:9.02:89,9,0
chr10	64900954	.	CAG	C	6635.72	PASS	AB=0.632;AC=41;AF=0.732;AN=56;BaseQRankSum=18.332;DP=518;FS=11.014;HRun=0;HaplotypeScore=291.6976;InbreedingCoeff=0.6924;MQ=95.07;MQ0=0;MQRankSum=-15.931;QD=20.17;ReadPosRankSum=8.938;VQSLOD=3.7926;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:12,18:31:5.75:317,0,6	1/1:1,4:5:15.01:141,15,0	0/0:38,0:38:99:0,108,2017	0/0:25,0:25:66.23:0,66,1305	1/1:2,13:15:13.43:180,13,0	1/1:4,13:17:25.11:378,25,0	0/1:6,9:15:5.73:234,0,6	1/1:2,10:12:35.97:347,36,0	0/0:30,0:30:90.28:0,90,1740	1/1:4,20:24:54.62:578,55,0	1/1:4,10:14:20.51:254,21,0	1/1:6,18:24:39.27:515,39,0	0/0:30,0:30:90.31:0,90,1826	1/1:1,16:17:51.06:482,51,0	1/1:4,12:16:19.27:348,19,0	1/1:7,9:16:20.11:255,20,0	1/1:3,8:11:18.31:235,18,0	1/1:2,10:12:30.76:316,31,0	0/1:6,7:13:45.05:178,0,45	1/1:0,15:15:43.21:391,43,0	1/1:3,7:10:4.89:111,5,0	1/1:1,8:9:3.53:171,4,0	0/0:28,0:28:84.27:0,84,1640	0/0:38,0:38:99:0,114,2210	1/1:2,10:12:11.24:246,11,0	1/1:5,15:20:34.88:449,35,0	1/1:3,15:18:24.54:415,25,0	1/1:0,3:3:9.02:95,9,0
chr10	64900956	.	G	GC	8683.93	PASS	AB=1.000;AC=43;AF=0.768;AN=56;BaseQRankSum=17.935;DP=630;FS=10.336;HRun=1;HaplotypeScore=344.3674;InbreedingCoeff=0.8988;MQ=86.29;MQ0=0;MQRankSum=-16.208;QD=19.43;ReadPosRankSum=4.633;VQSLOD=2.5675;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:40,0:39:51.98:497,52,0	1/1:6,0:6:17.95:149,18,0	0/0:36,0:36:99:0,102,1256	0/0:25,0:25:66.20:0,66,843	1/1:17,1:18:26.30:275,26,0	1/1:23,0:23:40.82:450,41,0	1/1:18,2:20:33.78:321,34,0	1/1:25,0:25:71.90:689,72,0	0/0:29,0:29:84.26:0,84,1075	1/1:28,2:30:75.32:654,75,0	1/1:18,1:19:43.93:341,44,0	1/1:29,2:31:64.71:628,65,0	0/0:31,0:31:93.27:0,93,1178	1/1:23,0:23:59.81:492,60,0	1/1:20,0:20:29.46:381,29,0	1/1:17,3:20:33.66:331,34,0	1/1:15,7:22:28.53:329,29,0	1/1:15,1:16:43.14:405,43,0	0/1:18,0:18:14.89:256,0,15	1/1:16,0:16:45.73:350,46,0	1/1:16,0:15:29.87:265,30,0	1/1:14,0:14:24.28:255,24,0	0/0:26,0:26:78.24:0,78,995	0/0:36,0:36:99:0,105,1362	1/1:17,0:17:33.84:336,34,0	1/1:25,0:25:67.23:642,67,0	1/1:22,0:22:44.55:472,45,0	1/1:6,0:6:18.02:168,18,0
chr10	64901733	.	TAAAAACAAAAAACA	T	944.04	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.736;DP=749;FS=7.077;HRun=0;HaplotypeScore=281.8485;InbreedingCoeff=0.9880;MQ=67.91;MQ0=3;MQRankSum=-5.259;QD=25.51;ReadPosRankSum=-0.524;VQSLOD=1.6474;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:19,18:37:24.13:1037,24,0	0/0:14,0:14:36.12:0,36,2125	0/0:33,0:27:33.06:0,33,911	0/0:26,0:21:17.94:0,18,866	0/0:33,0:33:73.36:0,73,1322	0/0:24,0:24:51.16:0,51,3180	0/0:18,0:18:39.13:0,39,2343	0/0:30,0:30:48.16:0,48,2910	0/0:24,0:24:49.98:0,50,3092	0/0:36,0:36:78.25:0,78,4233	0/0:25,0:25:48.16:0,48,3112	0/0:16,0:16:30.10:0,30,1767	0/0:16,0:16:42.14:0,42,2494	0/0:26,0:26:60.19:0,60,3285	0/0:41,0:41:87.30:0,87,5453	0/0:16,0:16:30.09:0,30,1752	0/0:26,0:26:63.22:0,63,3709	0/0:39,0:38:87.28:0,87,5269	0/0:23,0:22:39.13:0,39,1797	0/0:36,0:36:84.29:0,84,5253	0/0:15,0:15:33.10:0,33,1885	0/0:36,0:36:78.27:0,78,4482	0/0:23,0:23:60.19:0,60,3580	0/0:23,0:23:66.23:0,66,4095	0/0:28,0:28:69.24:0,69,4252	0/0:32,0:31:81.26:0,81,4616	0/0:35,0:35:84.25:0,84,5103	0/0:18,0:18:42.14:0,42,2775
chr10	64901747	.	AAAAAAC	A	1665.61	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=9.936;DP=717;FS=2.046;HRun=0;HaplotypeScore=148.2640;InbreedingCoeff=0.5643;MQ=65.65;MQ0=4;MQRankSum=-4.117;QD=28.23;ReadPosRankSum=-1.588;VQSLOD=3.0078;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:29:99:295,0,212	0/0:14,0:14:42.10:0,42,1191	0/0:25,0:20:2.07:0,2,702	0/0:20,0:15:26.15:0,26,520	1/1:1,29:30:84.27:1477,84,0	0/0:23,0:23:60.19:0,60,1770	0/0:18,0:18:51.16:0,51,1565	0/0:27,0:27:69.22:0,69,1868	0/0:23,0:23:64.45:0,64,1839	0/0:37,0:37:99:0,99,2516	0/0:19,0:19:51.16:0,51,1594	0/0:15,0:15:39.12:0,39,1058	0/0:18,0:18:54.17:0,54,1493	0/0:24,0:24:69.21:0,69,1866	0/0:39,0:39:99:0,108,2917	0/0:14,0:14:39.12:0,39,971	0/0:27,0:27:75.21:0,75,2121	0/0:38,0:37:99:0,108,3092	0/0:23,0:21:47.98:0,48,1043	0/0:37,0:37:99:0,105,2927	0/0:16,0:16:45.14:0,45,1249	0/0:28,0:28:81.26:0,81,2333	0/0:25,0:25:75.24:0,75,2112	0/0:26,0:26:75.24:0,75,2194	0/0:32,0:32:87.28:0,87,2573	0/0:33,0:32:96.30:0,96,2658	0/0:38,0:38:99:0,102,2978	0/0:19,0:19:57.16:0,57,1570
chr10	64902057	.	AC	A	1093.79	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=9.716;DP=729;FS=3.118;HRun=2;HaplotypeScore=112.4071;InbreedingCoeff=0.9994;MQ=91.34;MQ0=0;MQRankSum=-3.756;QD=25.44;ReadPosRankSum=2.960;VQSLOD=3.5085;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,37:43:99:1189,105,0	0/0:10,0:10:30.10:0,30,449	0/0:29,0:29:81.22:0,81,1105	0/0:35,0:34:89.85:0,90,1218	0/0:30,0:30:87.28:0,87,1272	0/0:26,0:26:78.26:0,78,1167	0/0:21,0:21:63.19:0,63,921	0/0:31,0:31:90.30:0,90,1330	0/0:23,0:23:69.23:0,69,1034	0/0:31,0:31:90.30:0,90,1348	0/0:26,0:26:75.25:0,75,1124	0/0:22,0:22:66.20:0,66,950	0/0:28,0:28:84.28:0,84,1256	0/0:16,0:16:48.12:0,48,675	0/0:28,0:28:84.28:0,84,1259	0/0:27,0:27:78.25:0,78,1149	0/0:33,0:33:96.31:0,96,1416	0/0:13,0:13:39.13:0,39,584	0/0:30,0:30:87.29:0,87,1283	0/0:28,0:28:75.23:0,75,1084	0/0:28,0:28:84.28:0,84,1257	0/0:25,0:25:72.22:0,72,1039	0/0:18,0:18:54.17:0,54,786	0/0:30,0:30:90.28:0,90,1326	0/0:14,0:14:42.12:0,42,590	0/0:32,0:32:96.31:0,96,1420	0/0:26,0:26:75.25:0,75,1123	0/0:26,0:26:78.26:0,78,1168
chr10	64902061	.	CA	C	1011.33	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=9.859;DP=729;FS=4.064;HRun=1;HaplotypeScore=109.3593;InbreedingCoeff=0.9993;MQ=92.64;MQ0=0;MQRankSum=-4.148;QD=24.67;ReadPosRankSum=2.785;VQSLOD=3.8108;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,41:41:99:1106,108,0	0/0:10,0:10:30.10:0,30,479	0/0:33,0:34:96.29:0,96,1445	0/0:31,0:30:82.01:0,82,1171	0/0:30,0:30:87.21:0,87,1354	0/0:27,0:27:78.24:0,78,1200	0/0:19,0:19:57.19:0,57,911	0/0:31,0:31:93.28:0,93,1401	0/0:24,0:24:72.23:0,72,1124	0/0:31,0:31:93.26:0,93,1380	0/0:26,0:26:75.26:0,75,1193	0/0:23,0:23:69.24:0,69,1103	0/0:29,0:29:84.29:0,84,1335	0/0:14,0:14:39.13:0,39,623	0/0:29,0:29:87.28:0,87,1360	0/0:26,0:26:78.25:0,78,1221	0/0:33,0:33:99:0,99,1571	0/0:13,0:13:39.08:0,39,572	0/0:27,0:27:81.28:0,81,1294	0/0:27,0:27:75.20:0,75,1144	0/0:31,0:31:93.25:0,93,1385	0/0:25,0:25:72.18:0,72,1034	0/0:17,0:17:51.17:0,51,815	0/0:33,0:33:99:0,99,1526	0/0:14,0:14:42.10:0,42,643	0/0:32,0:32:96.32:0,96,1514	0/0:25,0:25:75.22:0,75,1147	0/0:27,0:27:81.28:0,81,1282
chr10	64904795	.	GAA	G	4922.43	PASS	AB=0.650;AC=40;AF=0.714;AN=56;BaseQRankSum=0.245;DP=459;FS=2.919;HRun=14;HaplotypeScore=63.7165;InbreedingCoeff=0.5839;MQ=62.10;MQ0=11;MQRankSum=1.696;QD=13.75;ReadPosRankSum=4.212;VQSLOD=3.8591;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,25:33:67.73:618,68,0	1/1:6,0:7:11.67:82,12,0	0/0:10,0:7:20.01:0,20,190	0/0:12,0:5:5.29:0,5,51	1/1:6,10:18:11.68:189,12,0	0/1:5,8:14:21.37:124,0,21	1/1:3,12:15:23.97:222,24,0	0/1:9,10:16:26.43:186,0,26	0/0:11,0:10:20.93:0,21,211	1/1:5,9:13:20.96:194,21,0	1/1:5,11:16:16.28:199,16,0	1/1:5,11:17:17.69:150,18,0	0/0:16,0:17:33.10:0,33,445	1/1:3,4:7:8.82:127,9,0	1/1:3,12:15:30.02:277,30,0	0/1:3,6:11:42.42:127,0,42	1/1:11,28:40:74.75:678,75,0	1/1:6,10:18:32.41:273,32,0	1/1:7,8:13:23.97:222,24,0	1/1:5,12:17:32.93:304,33,0	1/1:4,6:11:19.86:161,20,0	1/1:4,7:11:20.99:192,21,0	0/0:16,0:18:36.73:0,37,342	0/0:25,0:33:74.70:0,75,934	1/1:6,1:8:5.70:90,6,0	1/1:8,9:17:23.69:201,24,0	1/1:5,11:18:14:241,14,0	0/1:7,2:11:56.82:64,0,57
chr10	64905108	.	CAACA	C	1016.11	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.787;DP=716;FS=0.000;HRun=0;HaplotypeScore=111.5054;InbreedingCoeff=0.9294;MQ=58.05;MQ0=6;MQRankSum=3.984;QD=27.46;ReadPosRankSum=1.301;VQSLOD=3.5405;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,28:37:69.24:1111,69,0	0/0:11,0:11:24.08:0,24,578	0/0:39,0:25:30.03:0,30,529	0/0:30,0:21:21.49:0,21,487	0/0:12,0:25:57.12:0,57,946	0/0:21,0:21:39.13:0,39,921	0/0:36,0:36:66.23:0,66,1542	0/0:30,0:30:33.11:0,33,683	0/0:29,0:29:66.21:0,66,1501	0/0:32,1:33:23.95:0,24,1541	0/0:25,0:25:48.16:0,48,1138	0/0:16,0:16:27.09:0,27,628	0/0:24,1:25:8.83:0,9,1132	0/0:13,0:13:27.09:0,27,636	0/0:31,0:31:66.21:0,66,1521	0/0:21,0:21:36.11:0,36,818	0/0:25,0:25:45.15:0,45,1071	0/0:19,0:19:48.16:0,48,1121	0/0:18,0:15:21.07:0,21,506	0/0:28,0:28:54.19:0,54,1221	0/0:45,0:45:93.29:0,93,2141	0/0:19,0:19:39.12:0,39,842	0/0:21,0:21:30.08:0,30,631	0/0:29,0:29:57.20:0,57,1355	0/0:17,0:17:37.37:0,37,815	0/0:29,0:29:69.21:0,69,1509	0/0:27,0:27:57.20:0,57,1339	0/0:15,0:15:42.11:0,42,934
chr10	64905353	.	CT	C	1797.72	PASS	AB=0.785;AC=38;AF=0.679;AN=56;BaseQRankSum=-1.240;DP=638;FS=7.656;HRun=15;HaplotypeScore=70.7434;InbreedingCoeff=0.3267;MQ=62.10;MQ0=7;MQRankSum=2.275;QD=3.57;ReadPosRankSum=1.529;VQSLOD=0.2880;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:43:61.79:0,62,335	1/1:4,2:6:2.82:19,3,0	0/1:35,0:15:5.21:5,0,16	0/0:21,1:5:2.99:0,3,23	1/1:19,5:26:19.52:112,20,0	1/1:18,6:28:12.64:131,13,0	1/1:9,11:21:24.89:148,25,0	0/0:28,0:35:30.16:0,30,266	0/1:19,1:20:1.12:1,0,216	1/1:17,10:29:27.58:153,28,0	1/1:6,5:11:5.79:38,6,0	1/1:15,2:17:12.96:65,13,0	0/0:13,0:14:3.51:0,4,79	1/1:5,13:19:13.78:80,14,0	0/1:15,10:26:6.53:66,0,7	1/1:10,10:21:12.57:69,13,0	1/1:8,16:25:22.61:140,23,0	1/1:13,15:29:14.23:143,14,0	0/1:18,14:33:22.18:201,0,22	1/1:10,14:27:21.81:111,22,0	1/1:8,1:13:14.04:73,14,0	0/1:10,8:18:11.55:50,0,12	0/1:12,2:14:24.69:25,0,104	0/0:17,0:18:30.55:0,31,262	0/1:8,5:15:11.18:17,0,11	1/1:9,12:23:11.44:155,11,0	1/1:21,6:27:13.76:135,14,0	0/1:11,7:20:4.88:37,0,5
chr10	64907580	.	T	TTTTG	13898.23	PASS	AB=0.851;AC=41;AF=0.732;AN=56;BaseQRankSum=-9.321;DP=645;FS=0.000;HRun=0;HaplotypeScore=87.9981;InbreedingCoeff=0.7185;MQ=56.85;MQ0=12;MQRankSum=0.327;QD=31.02;ReadPosRankSum=3.065;VQSLOD=4.5969;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:14,0:15:9.82:94,0,10	1/1:3,5:9:9.03:215,9,0	0/0:64,0:19:17.65:0,18,250	0/0:54,0:14:12:0,12,191	1/1:12,0:18:9.03:203,9,0	1/1:3,12:15:27.09:603,27,0	1/1:9,10:19:15.05:358,15,0	0/1:39,0:35:4.84:131,0,5	0/0:23,0:23:48.12:0,48,718	1/1:9,3:12:9.03:215,9,0	1/1:5,14:20:27.09:634,27,0	1/1:4,17:23:39.13:932,39,0	0/0:25,0:25:54.11:0,54,787	1/1:5,8:15:21.07:497,21,0	1/1:6,23:29:51.18:1204,51,0	1/1:5,18:23:45.15:1075,45,0	1/1:8,23:31:53.69:1290,54,0	1/1:9,13:22:27.09:607,27,0	1/1:13,5:18:15.05:333,15,0	1/1:7,14:21:36.12:861,36,0	0/1:9,15:22:8.78:823,0,9	1/1:6,6:14:15.05:347,15,0	0/0:12,0:12:21.06:0,21,312	0/0:19,0:19:42.14:0,42,671	1/1:4,12:16:30.10:717,30,0	1/1:7,12:21:42.12:895,42,0	1/1:7,23:30:60.17:1433,60,0	1/1:6,7:14:18.06:431,18,0
chr10	64911695	.	GT	G	6921.58	PASS	AB=0.894;AC=47;AF=0.839;AN=56;BaseQRankSum=1.829;DP=676;FS=0.958;HRun=13;HaplotypeScore=86.2920;InbreedingCoeff=0.6343;MQ=79.48;MQ0=1;MQRankSum=-0.728;QD=11.54;ReadPosRankSum=3.100;VQSLOD=4.8712;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:12,23:36:12.33:352,12,0	1/1:3,14:19:39.82:274,40,0	0/1:36,2:28:14.93:15,0,146	0/0:24,0:18:14.15:0,14,110	1/1:8,11:22:35.65:227,36,0	1/1:4,16:22:13.64:244,14,0	1/1:3,16:19:18.53:299,19,0	1/1:15,13:29:37.46:252,37,0	0/1:13,2:15:10.33:10,0,207	1/1:9,16:25:38.51:275,39,0	1/1:5,22:29:37.31:408,37,0	1/1:3,23:26:62.60:459,63,0	0/1:9,2:11:0.87:1,0,154	1/1:5,23:28:27.47:364,27,0	1/1:2,15:17:26.84:197,27,0	1/1:3,19:24:38.28:342,38,0	1/1:5,15:24:49.83:326,50,0	1/1:3,22:26:58.67:418,59,0	1/1:6,16:22:17.83:278,18,0	1/1:7,21:30:4.41:327,4,0	1/1:3,16:20:35.02:247,35,0	1/1:6,21:28:8.25:289,8,0	0/0:27,4:33:27.94:0,28,554	0/0:18,1:19:19.49:0,19,312	1/1:3,18:21:41.74:306,42,0	1/1:9,18:27:27.09:343,27,0	1/1:2,24:29:65.88:447,66,0	1/1:0,10:10:29.83:219,30,0
chr10	64912057	.	TTCTCTCTCTCTCTC	T	232.47	PASS	AB=0.988;AC=8;AF=0.174;AN=46;BaseQRankSum=3.977;DP=575;FS=0.000;HRun=0;HaplotypeScore=193.4385;InbreedingCoeff=0.1870;MQ=62.07;MQ0=13;MQRankSum=-0.621;QD=1.80;ReadPosRankSum=-0.563;VQSLOD=2.6180;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:45:49.66:0,50,963	0/0:7,0:7:1.55:0,2,4	./.	./.	0/0:20,0:19:9.02:0,9,159	0/0:19,0:19:6.01:0,6,75	0/1:21,0:21:7.48:7,0,98	0/0:37,0:35:18.06:0,18,529	0/0:22,0:22:15.51:0,16,573	0/0:16,0:16:10.28:0,10,160	0/0:15,0:15:6.01:0,6,75	0/0:14,0:14:12.04:0,12,360	0/0:20,0:21:17.77:0,18,544	0/0:11,0:11:3.01:0,3,115	1/1:14,5:20:9.03:246,9,0	0/1:19,0:20:42.64:43,0,105	0/0:20,0:20:25.77:0,26,285	1/1:19,0:22:3.90:32,4,0	0/1:23,0:23:13.03:13,0,62	0/1:22,0:22:12.96:13,0,63	0/0:18,0:18:12.03:0,12,174	0/0:12,0:12:9.03:0,9,288	./.	0/0:17,0:20:2.99:0,3,24	0/0:19,0:19:5.74:0,6,36	0/0:20,0:20:12.01:0,12,135	./.	./.
chr10	64915539	.	A	ATG	1030.29	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-3.347;DP=884;FS=3.579;HRun=0;HaplotypeScore=107.3700;InbreedingCoeff=0.9994;MQ=65.64;MQ0=2;MQRankSum=0.639;QD=28.62;ReadPosRankSum=-0.352;VQSLOD=4.8618;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:48:99:0,123,1555	0/0:13,0:13:33.09:0,33,408	0/0:51,0:42:59.99:0,60,956	0/0:43,0:35:65.95:0,66,879	1/1:10,26:36:33.65:1125,34,0	0/0:25,0:25:66.21:0,66,848	0/0:30,0:30:72.20:0,72,895	0/0:37,0:37:75.69:0,76,930	0/0:32,0:32:87.27:0,87,1104	0/0:27,0:27:78.24:0,78,978	0/0:18,0:18:48.16:0,48,618	0/0:37,0:37:99:0,102,1284	0/0:16,0:16:48.16:0,48,617	0/0:40,0:40:99:0,111,1400	0/0:26,0:26:69.22:0,69,888	0/0:31,0:31:90.28:0,90,1144	0/0:39,0:39:99:0,102,1292	0/0:20,0:20:45.15:0,45,578	0/0:16,0:16:39.10:0,39,473	0/0:27,0:27:75.23:0,75,951	0/0:61,0:61:99:0,160,2045	0/0:29,0:29:78.25:0,78,1002	0/0:22,0:22:63.19:0,63,795	0/0:57,0:57:99:0,150,1913	0/0:21,0:21:59.99:0,60,758	0/0:27,0:27:72.23:0,72,926	0/0:26,0:26:66.21:0,66,849	0/0:27,0:27:70.84:0,71,993
chr10	64916964	.	A	AG	288.91	PASS	AB=0.788;AC=2;AF=0.036;AN=56;BaseQRankSum=5.688;DP=698;FS=4.425;HRun=1;HaplotypeScore=76.9868;InbreedingCoeff=-0.0382;MQ=65.14;MQ0=3;MQRankSum=3.625;QD=7.22;ReadPosRankSum=-3.439;VQSLOD=-0.4794;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,159,2048	0/0:12,0:12:36.12:0,36,467	0/1:9,6:10:89.82:241,0,90	0/1:21,4:18:99:137,0,408	0/0:25,0:25:75.24:0,75,973	0/0:23,0:23:69.22:0,69,895	0/0:32,0:32:93.27:0,93,1175	0/0:28,0:27:81.26:0,81,1041	0/0:24,0:24:72.22:0,72,920	0/0:20,0:20:57.18:0,57,739	0/0:16,0:16:45.15:0,45,584	0/0:30,0:30:87.28:0,87,1128	0/0:22,0:22:60.19:0,60,778	0/0:23,0:23:69.22:0,69,895	0/0:26,0:26:78.24:0,78,999	0/0:25,0:25:75.24:0,75,973	0/0:33,0:33:87.26:0,87,1113	0/0:20,0:20:57.19:0,57,740	0/0:24,0:22:66.20:0,66,833	0/0:30,0:30:90.29:0,90,1164	0/0:44,0:44:99:0,129,1674	0/0:19,0:19:57.19:0,57,740	0/0:24,0:24:72.23:0,72,932	0/0:22,0:22:60.19:0,60,778	0/0:13,0:12:36.12:0,36,467	0/0:25,0:25:75.24:0,75,974	0/0:39,0:39:99:0,114,1450	0/0:4,0:4:12.04:0,12,156
chr10	64917010	.	AT	A	2631.12	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=11.430;DP=674;FS=0.398;HRun=8;HaplotypeScore=67.3629;InbreedingCoeff=0.9775;MQ=65.13;MQ0=1;MQRankSum=0.914;QD=23.49;ReadPosRankSum=-0.680;VQSLOD=3.8849;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,46:49:99:1217,126,0	0/0:11,0:11:30.09:0,30,362	0/0:12,0:11:30.04:0,30,330	0/0:14,0:14:20.17:0,20,392	1/1:1,22:23:57.08:550,57,0	0/0:30,0:30:84.26:0,84,1015	0/0:33,0:33:93.26:0,93,1101	1/1:5,35:40:99:1007,105,0	0/0:24,0:24:69.20:0,69,822	0/0:18,0:18:54.17:0,54,652	0/0:23,0:23:66.17:0,66,756	0/0:24,0:24:72.22:0,72,866	0/0:20,0:20:57.16:0,57,676	0/0:27,0:27:72.22:0,72,870	0/0:21,0:21:63.19:0,63,761	0/0:17,0:17:45.14:0,45,544	0/0:24,0:24:63.19:0,63,761	0/0:19,0:19:45.14:0,45,542	0/0:25,0:24:66.20:0,66,794	0/0:29,0:29:81.25:0,81,979	0/0:38,0:38:95.99:0,96,1223	0/0:20,0:20:45.13:0,45,533	0/0:22,0:22:57.17:0,57,675	0/0:23,0:23:60.18:0,60,724	0/0:15,0:15:45.14:0,45,544	0/0:33,0:33:93.26:0,93,1096	0/0:36,0:35:99:0,105,1267	0/0:4,0:4:9.03:0,9,109
chr10	64918846	.	A	AGC	3612.37	PASS	AC=38;AF=0.704;AN=54;BaseQRankSum=4.194;DP=554;FS=12.356;HRun=0;HaplotypeScore=114.7022;InbreedingCoeff=0.8488;MQ=66.16;MQ0=6;MQRankSum=0.919;QD=10.12;ReadPosRankSum=-0.566;VQSLOD=2.6292;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:28.59:0,29,476	1/1:11,0:11:3:28,3,0	0/0:25,0:15:32.71:0,33,310	0/0:30,0:23:40.63:0,41,424	1/1:5,25:29:6.02:109,6,0	1/1:8,0:8:11.82:81,12,0	1/1:28,0:28:53.64:436,54,0	0/0:18,0:18:22.06:0,22,331	0/0:23,0:23:49.84:0,50,384	1/1:28,0:27:60.56:471,61,0	1/1:16,0:16:26.82:198,27,0	1/1:0,0:14:3:28,3,0	0/0:10,0:10:26.93:0,27,268	1/1:13,0:13:3:27,3,0	1/1:18,0:18:8.06:64,8,0	1/1:19,0:19:2.74:27,3,0	1/1:23,0:23:14.57:123,15,0	1/1:17,1:18:38.32:293,38,0	1/1:17,0:16:38.66:279,39,0	1/1:17,0:17:20.84:153,21,0	1/1:36,0:35:51.84:367,52,0	1/1:20,0:20:26.79:203,27,0	0/0:11,0:11:32.98:0,33,308	0/0:33,0:33:77.92:0,78,764	1/1:13,0:13:26.62:210,27,0	1/1:17,0:17:41.17:312,41,0	1/1:11,0:11:32.33:204,32,0	./.
chr10	64918848	.	C	CGCGCGTGTGTGT	11395.71	PASS	AB=1.000;AC=39;AF=0.696;AN=56;BaseQRankSum=-3.243;DP=631;FS=27.108;HRun=0;HaplotypeScore=210.1763;InbreedingCoeff=0.7529;MQ=62.22;MQ0=7;MQRankSum=-3.498;QD=27.33;ReadPosRankSum=-3.396;VQSLOD=2.5418;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:47:69.19:0,69,1105	1/1:4,5:13:2.72:186,3,0	0/0:25,0:15:32.53:0,33,517	0/0:29,0:22:43.48:0,43,756	0/0:28,0:27:6.02:0,6,93	1/1:10,0:10:5.21:155,5,0	1/1:30,0:30:9.32:312,9,0	0/1:23,0:23:99:373,0,568	0/0:12,0:22:50.19:0,50,1052	1/1:31,0:30:89.99:1548,90,0	1/1:16,0:16:27.03:399,27,0	1/1:17,0:17:3.90:83,4,0	0/0:11,0:12:26.69:0,27,595	1/1:4,7:17:3.48:187,3,0	1/1:4,16:23:12.04:684,12,0	1/1:4,0:22:6.02:275,6,0	1/1:9,14:27:19.36:696,19,0	1/1:20,0:20:54.08:1228,54,0	1/1:19,0:18:48.58:959,49,0	1/1:17,0:18:23.98:440,24,0	1/1:40,0:39:60.02:986,60,0	1/1:26,0:26:32.61:431,33,0	0/0:12,0:12:33.10:0,33,611	0/0:33,0:39:83.05:0,83,1922	1/1:16,0:16:30.08:442,30,0	1/1:22,0:22:59.40:1139,59,0	1/1:16,0:16:41.16:817,41,0	1/1:3,4:9:3.48:55,3,0
chr10	64919318	.	A	AGT	4684.28	PASS	AB=0.545;AC=37;AF=0.685;AN=54;BaseQRankSum=2.194;DP=278;FS=8.763;HRun=0;HaplotypeScore=77.7091;InbreedingCoeff=0.7136;MQ=66.18;MQ0=2;MQRankSum=-1.539;QD=22.74;ReadPosRankSum=4.340;VQSLOD=4.5860;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:6:5.98:0,6,46	1/1:3,0:3:2.99:50,3,0	0/0:7,0:5:11.61:0,12,98	0/0:19,0:9:3.95:0,4,13	1/1:10,0:21:11.85:111,12,0	1/1:7,13:20:9.03:150,9,0	1/1:0,6:6:3.01:50,3,0	0/0:21,0:21:49.45:0,49,394	0/0:5,0:5:12.03:0,12,140	1/1:3,8:11:24.08:398,24,0	1/1:3,1:5:8.99:122,9,0	1/1:3,5:8:18.03:248,18,0	0/0:5,0:5:9.02:0,9,102	1/1:0,10:10:18.06:299,18,0	1/1:1,4:5:3.01:50,3,0	1/1:1,6:7:12.04:198,12,0	1/1:10,6:16:41.90:489,42,0	1/1:13,7:20:35.99:469,36,0	1/1:4,13:17:39.03:530,39,0	1/1:4,2:6:8.39:96,8,0	1/1:1,10:11:18.06:284,18,0	./.	0/0:4,0:4:12.01:0,12,126	0/0:2,0:2:3.01:0,3,38	1/1:4,11:15:9.55:288,10,0	0/1:1,5:6:0.96:150,0,1	1/1:1,6:7:12.04:199,12,0	1/1:1,11:12:35.98:507,36,0
chr10	64919327	.	GTA	G	353.86	PASS	AB=1.000;AC=6;AF=0.115;AN=52;BaseQRankSum=-3.154;DP=255;FS=3.949;HRun=0;HaplotypeScore=91.8624;InbreedingCoeff=0.3199;MQ=62.24;MQ0=2;MQRankSum=1.559;QD=6.21;ReadPosRankSum=-1.371;VQSLOD=2.8198;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,0:8:5.68:36,6,0	0/0:3,0:3:0.89:0,1,2	./.	0/0:13,0:5:5.19:0,5,22	0/0:23,0:23:7.38:0,7,22	0/0:16,0:16:3.38:0,3,8	0/0:6,0:6:0.47:0,0,1	1/1:8,12:20:36.05:414,36,0	0/0:4,0:4:12.04:0,12,197	0/0:9,0:9:9.51:0,10,32	0/0:5,0:5:2.13:0,2,5	0/0:8,0:8:8.61:0,9,40	0/0:3,0:3:6.02:0,6,98	0/0:10,0:10:6.70:0,7,15	0/0:4,0:4:1.25:0,1,3	0/0:7,0:7:5.61:0,6,17	0/0:15,0:15:22.08:0,22,103	0/0:16,0:16:3.12:0,3,59	0/1:14,0:14:1.91:2,0,92	0/0:5,0:5:3.86:0,4,23	0/0:9,0:9:7.97:0,8,26	./.	0/0:4,0:4:9.03:0,9,136	0/0:2,0:2:3.01:0,3,49	0/1:15,0:15:13.99:14,0,25	0/0:6,0:6:2.71:0,3,20	0/0:6,0:6:5.87:0,6,16	0/0:13,0:13:17.07:0,17,64
chr10	64919363	.	CAT	C	2461.87	PASS	AB=0.662;AC=27;AF=0.500;AN=54;BaseQRankSum=4.169;DP=236;FS=3.164;HRun=0;HaplotypeScore=76.0346;InbreedingCoeff=0.3960;MQ=55.35;MQ0=7;MQRankSum=-1.170;QD=16.86;ReadPosRankSum=3.264;VQSLOD=3.3115;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:9.12:0,9,228	1/1:0,3:3:9.03:121,9,0	./.	0/0:13,0:5:2.02:0,2,22	0/0:17,1:18:3.62:0,4,29	0/1:5,10:15:13.47:134,0,13	0/0:3,1:4:5.42:0,5,22	0/0:16,0:14:6.19:0,6,186	0/0:4,0:4:12.04:0,12,222	1/1:8,4:12:10.56:195,11,0	0/0:1,1:2:0:0,0,0	1/1:1,3:4:9.03:106,9,0	0/0:4,0:4:8.82:0,9,127	1/1:6,1:7:14.60:176,15,0	1/1:5,0:5:0.53:54,1,0	0/1:5,3:8:7.48:59,0,7	1/1:6,8:14:2.19:229,2,0	0/1:7,7:14:11.04:207,0,11	1/1:12,4:16:7.35:298,7,0	1/1:1,5:6:12.78:83,13,0	1/1:5,3:8:10.01:129,10,0	0/0:2,1:3:6.38:0,6,25	0/0:2,0:2:6.02:0,6,116	0/0:2,0:2:3.01:0,3,37	1/1:4,4:8:17.97:217,18,0	1/1:3,2:5:12.04:150,12,0	0/1:1,4:5:2.70:111,0,3	0/1:11,5:16:3.78:363,0,4
chr10	64919367	.	CAT	C	744.25	PASS	AB=0.786;AC=19;AF=0.352;AN=54;BaseQRankSum=3.561;DP=243;FS=11.736;HRun=0;HaplotypeScore=82.5269;InbreedingCoeff=-0.1576;MQ=60.30;MQ0=6;MQRankSum=-1.215;QD=5.10;ReadPosRankSum=3.822;VQSLOD=1.2757;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:10:5.91:0,6,85	1/1:1,2:3:4.20:51,4,0	./.	0/0:18,0:7:5.04:0,5,57	0/0:6,0:18:2.91:0,3,27	0/1:9,6:16:45.08:45,0,79	0/0:5,0:5:5.93:0,6,42	0/0:17,0:15:6.37:0,6,183	0/0:4,0:4:9.03:0,9,136	0/1:10,3:13:27.77:76,0,28	0/0:0,3:3:0:0,0,0	0/0:3,1:4:0:0,0,0	0/1:3,1:4:26.72:27,0,72	0/1:5,0:5:7.29:21,0,7	0/1:5,0:5:22.74:23,0,29	0/1:8,1:9:24.14:24,0,58	0/1:6,8:14:26.46:123,0,26	0/1:10,4:14:28.45:28,0,72	0/1:11,3:14:35.40:85,0,35	0/1:0,5:6:6.52:75,0,7	0/1:6,2:8:21.24:21,0,24	0/0:2,1:3:8.71:0,9,55	0/0:2,0:2:6.02:0,6,91	0/0:3,0:3:6.02:0,6,76	1/1:7,2:9:8.18:43,8,0	1/1:3,2:5:11.94:91,12,0	0/1:3,1:5:3.80:44,0,4	0/1:11,5:16:47.56:117,0,48
chr10	64920029	.	CTTGTGTGT	C	826.37	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-4.696;DP=554;FS=2.374;HRun=0;HaplotypeScore=158.2071;InbreedingCoeff=0.9907;MQ=56.57;MQ0=14;MQRankSum=0.619;QD=24.31;ReadPosRankSum=-0.803;VQSLOD=3.2873;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:18:20.59:0,21,900	0/0:11,0:11:26.86:0,27,367	0/0:32,0:12:32.99:0,33,418	0/0:21,0:10:27.07:0,27,337	0/0:19,0:17:39.43:0,39,632	0/0:20,0:19:35.88:0,36,868	0/0:20,0:20:47.16:0,47,1078	1/1:30,4:34:65.45:921,65,0	0/0:20,0:20:48.09:0,48,1339	0/0:21,0:21:63.17:0,63,1504	0/0:12,0:13:35.89:0,36,601	0/0:13,0:13:32.87:0,33,635	0/0:20,0:20:60.17:0,60,1975	0/0:14,0:14:27.57:0,28,458	0/0:15,0:15:35.89:0,36,657	0/0:15,0:14:35.95:0,36,561	0/0:20,0:19:47.96:0,48,1182	0/0:13,0:13:30.03:0,30,711	0/0:24,0:23:67.96:0,68,1423	0/0:16,0:16:47.91:0,48,975	0/0:19,0:19:41.78:0,42,470	0/0:19,0:19:35.93:0,36,597	0/0:23,0:23:57.08:0,57,1498	0/0:31,0:31:84.21:0,84,3086	0/0:24,0:23:56.86:0,57,1143	0/0:24,0:24:72.13:0,72,2150	0/0:17,0:17:41.96:0,42,767	0/0:16,0:16:39.09:0,39,1144
chr10	64920030	.	T	TTGTGTG	8140.56	PASS	AB=0.970;AC=43;AF=0.827;AN=52;BaseQRankSum=-3.631;DP=622;FS=4.525;HRun=0;HaplotypeScore=167.5480;InbreedingCoeff=0.5969;MQ=54.50;MQ0=14;MQRankSum=-6.368;QD=16.41;ReadPosRankSum=-1.957;VQSLOD=4.0225;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:25:17.07:215,17,0	1/1:6,1:11:6.02:120,6,0	./.	./.	1/1:26,0:24:6.02:77,6,0	1/1:19,2:21:15.05:321,15,0	1/1:15,7:23:16.32:529,16,0	0/1:33,0:33:26.38:26,0,148	0/0:8,0:19:7.97:0,8,16	1/1:21,0:22:14.72:312,15,0	1/1:10,2:15:9.03:201,9,0	1/1:12,2:15:15.05:336,15,0	0/0:19,0:20:36.98:0,37,638	1/1:10,4:15:9.90:219,10,0	1/1:13,4:19:18.06:444,18,0	1/1:21,0:20:20.05:383,20,0	1/1:20,5:26:34.24:848,34,0	1/1:12,2:18:23.11:521,23,0	1/1:18,7:24:21.48:326,21,0	1/1:8,8:19:22.25:659,22,0	0/1:18,0:20:0:1,0,0	1/1:17,4:20:12.04:370,12,0	0/1:21,0:23:6.40:6,0,296	0/0:32,0:33:51.09:0,51,1018	1/1:20,7:30:15.05:455,15,0	1/1:17,8:27:33.78:773,34,0	1/1:12,4:17:12.04:385,12,0	1/1:6,8:19:20.21:611,20,0
chr10	64920303	.	CT	C	754.55	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.445;DP=881;FS=10.969;HRun=4;HaplotypeScore=83.0062;InbreedingCoeff=0.9999;MQ=66.16;MQ0=3;MQRankSum=1.667;QD=26.02;ReadPosRankSum=-4.808;VQSLOD=1.0629;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,132,1845	0/0:14,0:14:42.11:0,42,566	0/0:45,2:30:52.01:0,52,916	0/0:44,0:28:57.87:0,58,817	0/0:28,0:28:84.26:0,84,1156	0/0:27,0:27:78.21:0,78,1071	0/0:26,0:26:78.25:0,78,1075	1/1:2,27:29:75.15:849,75,0	0/0:33,0:33:93.30:0,93,1285	0/0:25,0:25:66.22:0,66,924	0/0:13,0:13:39.12:0,39,528	0/0:31,0:31:90.30:0,90,1257	0/0:26,0:26:75.22:0,75,1014	0/0:20,0:20:57.19:0,57,797	0/0:32,0:32:93.29:0,93,1272	0/0:39,0:39:99:0,117,1634	0/0:44,0:44:99:0,129,1760	0/0:28,0:28:84.25:0,84,1139	0/0:31,0:31:93.30:0,93,1286	0/0:37,0:37:99:0,108,1454	0/0:62,0:62:99:0,187,2582	0/0:23,0:23:57.18:0,57,779	0/0:27,0:27:81.27:0,81,1129	0/0:59,0:59:99:0,175,2389	0/0:24,0:24:72.22:0,72,988	0/0:29,0:29:87.28:0,87,1189	0/0:19,0:19:57.18:0,57,776	0/0:19,0:19:54.18:0,54,756
chr10	64922252	.	CT	C	960.75	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.730;DP=607;FS=3.399;HRun=1;HaplotypeScore=63.6583;InbreedingCoeff=0.9972;MQ=85.53;MQ0=0;MQRankSum=1.009;QD=33.13;ReadPosRankSum=-4.205;VQSLOD=2.1777;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:90.21:0,90,1335	0/0:8,0:8:24.08:0,24,380	0/0:25,0:25:65.20:0,65,922	0/0:24,0:24:29.44:0,29,762	0/0:23,0:23:66.23:0,66,1050	0/0:27,0:27:81.25:0,81,1234	0/0:21,0:21:63.21:0,63,1004	1/1:0,29:29:81.10:1056,81,0	0/0:16,0:16:48.16:0,48,764	0/0:23,0:22:69.21:0,69,1037	0/0:15,0:15:39.08:0,39,553	0/0:14,0:14:42.13:0,42,647	0/0:21,0:21:63.21:0,63,1006	0/0:20,0:20:60.19:0,60,935	0/0:18,0:18:54.16:0,54,817	0/0:22,0:22:66.23:0,66,1054	0/0:31,0:31:93.30:0,93,1447	0/0:22,0:22:66.15:0,66,970	0/0:15,0:15:42.09:0,42,621	0/0:20,0:20:60.18:0,60,912	0/0:22,0:22:66.20:0,66,1027	0/0:18,0:18:51.12:0,51,740	0/0:21,0:21:63.20:0,63,979	0/0:14,0:14:42.13:0,42,635	0/0:20,0:20:60.20:0,60,957	0/0:33,0:33:99:0,99,1510	0/0:33,0:32:93.19:0,93,1404	0/0:21,0:21:63.21:0,63,997
chr10	64922523	.	G	GA	2296.77	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=8.423;DP=549;FS=4.300;HRun=11;HaplotypeScore=97.2295;InbreedingCoeff=0.8666;MQ=74.45;MQ0=1;MQRankSum=-6.152;QD=6.04;ReadPosRankSum=0.018;VQSLOD=2.2856;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:10,39:51:68.68:882,69,0	1/1:5,0:10:8.52:44,9,0	0/0:30,0:23:12.21:0,12,139	0/0:23,0:22:3.16:0,3,140	0/0:18,1:19:14.35:0,14,292	1/1:4,1:24:25.23:121,25,0	1/1:6,0:13:14.20:72,14,0	0/0:5,0:24:36.17:0,36,103	0/0:19,0:19:25.19:0,25,324	1/1:8,1:22:21.78:125,22,0	1/1:10,0:24:19.61:101,20,0	1/1:4,0:12:17.04:86,17,0	0/0:11,0:11:29.88:0,30,232	1/1:16,0:20:22.29:109,22,0	1/1:10,0:17:11.83:59,12,0	1/1:4,1:18:19.99:105,20,0	1/1:7,1:21:15.09:74,15,0	1/1:1,0:14:8.99:44,9,0	1/1:16,0:18:9.74:47,10,0	1/1:15,0:17:14.02:63,14,0	1/1:9,1:19:8.79:37,9,0	1/1:4,0:13:18.95:89,19,0	0/0:18,0:18:47.78:0,48,371	0/0:21,0:21:50.78:0,51,393	1/1:7,0:10:8.52:43,9,0	1/1:11,0:32:54.91:274,55,0	1/1:18,0:19:22.55:107,23,0	1/1:2,0:4:2.84:14,3,0
chr10	64924270	.	GCA	G	3833.16	PASS	AB=0.862;AC=37;AF=0.685;AN=54;BaseQRankSum=2.247;DP=641;FS=1.574;HRun=0;HaplotypeScore=111.0927;InbreedingCoeff=0.4085;MQ=62.54;MQ0=18;MQRankSum=0.850;QD=8.50;ReadPosRankSum=3.662;VQSLOD=3.5013;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:41:8.82:0,9,398	1/1:4,2:9:8.85:81,9,0	./.	0/0:34,0:14:3.01:0,3,43	0/0:15,0:37:30.79:0,31,268	1/1:10,9:18:0.23:210,0,0	1/1:19,6:27:30.23:314,30,0	0/0:26,0:24:26.65:0,27,219	0/1:16,1:18:46.48:46,0,287	0/1:12,4:18:1.13:188,0,1	1/1:10,8:19:16.02:197,16,0	1/1:14,5:21:17.71:161,18,0	0/0:13,0:14:9.94:0,10,260	1/1:8,8:17:14.87:147,15,0	1/1:16,7:25:27.04:243,27,0	1/1:10,9:20:28.95:314,29,0	1/1:17,10:28:34.43:396,34,0	0/1:27,2:28:15.97:16,0,586	0/1:7,1:9:4.82:39,0,5	1/1:15,14:29:24.06:267,24,0	1/1:13,9:19:15.04:167,15,0	0/1:19,9:28:16.03:213,0,16	0/1:23,2:25:3.55:4,0,297	0/1:16,1:18:0.32:0,0,337	1/1:13,10:24:25.45:250,25,0	1/1:9,6:18:23.93:210,24,0	1/1:8,12:20:10.75:305,11,0	1/1:4,2:4:6.49:68,6,0
chr10	64924431	.	AACACAC	A	1387.60	PASS	AB=0.792;AC=41;AF=0.854;AN=48;BaseQRankSum=2.570;DP=496;FS=13.113;HRun=0;HaplotypeScore=100.6625;InbreedingCoeff=0.3569;MQ=62.46;MQ0=22;MQRankSum=-2.897;QD=4.15;ReadPosRankSum=1.468;VQSLOD=0.5205;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:31:0.47:1,0,0	1/1:5,0:5:3.46:24,3,0	./.	./.	1/1:10,0:14:3:28,3,0	1/1:7,3:10:6.02:95,6,0	1/1:20,0:22:5.70:65,6,0	./.	1/1:17,2:17:9.01:144,9,0	1/1:15,0:13:6.01:88,6,0	1/1:6,0:6:5.96:45,6,0	0/1:14,5:18:20.31:52,0,20	0/0:15,0:15:21.45:0,21,284	1/1:7,4:11:3.01:60,3,0	1/1:10,5:13:6.02:120,6,0	1/1:9,6:14:3.01:60,3,0	1/1:23,1:24:12.68:121,13,0	1/1:17,0:15:3.05:17,3,0	1/1:9,0:8:0.08:49,0,0	1/1:19,0:19:8.99:74,9,0	1/1:23,0:21:0.48:105,0,0	./.	0/0:19,0:19:21.04:0,21,469	0/0:39,0:40:39.13:0,39,899	1/1:8,3:12:9.03:159,9,0	1/1:14,0:15:5.99:64,6,0	1/1:22,1:22:6:84,6,0	1/1:5,0:5:5.98:69,6,0
chr10	64925892	.	TGAAAGAATCGTTTCCCA	T	3388.69	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=8.101;DP=771;FS=5.392;HRun=0;HaplotypeScore=367.8890;InbreedingCoeff=0.9970;MQ=86.19;MQ0=0;MQRankSum=-7.993;QD=96.82;ReadPosRankSum=1.283;VQSLOD=2.5582;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,26:35:69.24:3389,69,0	0/0:8,0:8:24.08:0,24,1855	0/0:29,0:29:78.27:0,78,4435	0/0:23,0:23:60.55:0,61,3908	0/0:31,0:31:90.30:0,90,6934	0/0:26,0:26:75.26:0,75,5712	0/0:34,0:34:99:0,99,7268	0/0:27,0:27:81.28:0,81,5859	0/0:21,0:21:60.19:0,60,4459	0/0:40,0:40:99:0,114,8804	0/0:23,0:23:69.24:0,69,5255	0/0:31,0:31:90.31:0,90,7044	0/0:24,0:24:69.24:0,69,5287	0/0:26,0:26:78.27:0,78,5854	0/0:36,0:36:99:0,105,7752	0/0:33,0:33:93.32:0,93,7386	0/0:28,0:28:84.29:0,84,6467	0/0:16,0:16:45.15:0,45,3600	0/0:27,0:27:81.28:0,81,4777	0/0:23,0:23:66.21:0,66,4529	0/0:51,0:51:99:0,153,10738	0/0:29,0:29:87.28:0,87,6219	0/0:26,0:26:72.25:0,72,5606	0/0:28,0:28:78.27:0,78,5839	0/0:23,0:23:69.24:0,69,4865	0/0:30,0:30:90.31:0,90,6842	0/0:34,0:33:99:0,99,7427	0/0:9,0:9:27.09:0,27,2105
chr10	64928366	.	G	GA	7732.38	PASS	AB=0.576;AC=39;AF=0.696;AN=56;BaseQRankSum=-11.280;DP=603;FS=2.721;HRun=11;HaplotypeScore=70.8695;InbreedingCoeff=0.8668;MQ=82.91;MQ0=0;MQRankSum=-2.547;QD=18.54;ReadPosRankSum=2.371;VQSLOD=6.0870;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,29:37:25.48:596,25,0	1/1:2,5:7:12.02:122,12,0	0/0:31,0:31:15.99:0,16,210	0/0:17,0:18:8.68:0,9,168	0/0:6,0:30:24.47:0,24,98	1/1:3,19:22:15.07:421,15,0	1/1:2,14:16:39.07:393,39,0	0/0:4,0:27:40.76:0,41,125	0/0:24,0:24:50.68:0,51,389	1/1:6,11:17:27.04:267,27,0	1/1:4,12:16:26.94:241,27,0	1/1:2,14:16:36.07:365,36,0	0/0:11,0:11:26.87:0,27,206	1/1:4,11:16:29.89:288,30,0	1/1:8,24:32:7.63:441,8,0	1/1:4,15:19:9.83:281,10,0	1/1:2,22:24:51.10:518,51,0	1/1:3,23:26:48.10:487,48,0	1/1:5,13:19:18.63:339,19,0	1/1:3,18:21:53.84:474,54,0	0/1:5,14:19:27.63:293,0,28	1/1:4,27:32:57.12:714,57,0	0/0:23,1:25:34.34:0,34,439	0/0:20,0:20:44.72:0,45,343	1/1:4,14:18:12.94:312,13,0	1/1:7,17:24:14.52:500,15,0	1/1:4,18:23:30.47:467,30,0	1/1:4,9:13:21.04:213,21,0
chr10	64929309	.	A	AT	23634.65	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=10.096;DP=749;FS=8.972;HRun=1;HaplotypeScore=156.2936;InbreedingCoeff=0.9997;MQ=78.21;MQ0=0;MQRankSum=-4.053;QD=40.75;ReadPosRankSum=1.267;VQSLOD=3.1917;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,38:40:99:1544,105,0	1/1:1,9:10:30.07:425,30,0	0/0:14,0:14:42.12:0,42,530	0/0:21,0:21:51.09:0,51,618	1/1:1,18:19:51.04:709,51,0	1/1:0,21:21:54.18:809,54,0	1/1:0,38:38:99:1568,105,0	0/0:26,0:26:42.20:0,42,260	0/0:26,1:27:33.28:0,33,929	1/1:1,27:28:81.19:1162,81,0	1/1:0,14:14:33.07:469,33,0	1/1:0,36:36:99:1590,108,0	0/0:39,0:39:99:0,117,1504	1/1:1,23:24:60.18:897,60,0	1/1:0,22:22:66.22:988,66,0	1/1:0,28:28:84.28:1259,84,0	1/1:1,36:36:99:1528,102,0	1/1:0,30:29:90.30:1348,90,0	1/1:4,15:19:45.14:653,45,0	1/1:2,18:20:54.05:756,54,0	1/1:1,59:60:99:2535,172,0	1/1:2,30:32:87.29:1296,87,0	0/0:12,0:12:36.11:0,36,455	0/0:30,0:30:90.29:0,90,1168	1/1:1,23:23:66.22:989,66,0	1/1:1,25:26:72.24:1070,72,0	1/1:2,35:38:99:1590,108,0	1/1:0,14:14:30.10:449,30,0
chr10	64929637	.	A	AATAG	27845.15	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-11.411;DP=702;FS=1.344;HRun=0;HaplotypeScore=111.5186;InbreedingCoeff=0.9942;MQ=69.04;MQ0=0;MQRankSum=-3.793;QD=48.51;ReadPosRankSum=2.749;VQSLOD=5.3797;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,32:41:63.22:1572,63,0	1/1:2,5:7:18.06:424,18,0	0/0:24,0:23:24.31:0,24,610	0/0:14,0:14:27.02:0,27,395	1/1:4,26:30:65.21:1575,65,0	1/1:3,19:22:51.18:1274,51,0	1/1:4,17:22:51.18:1251,51,0	1/1:13,28:40:84.09:1631,84,0	0/0:25,0:25:72.17:0,72,1089	1/1:7,26:34:83.95:1966,84,0	1/1:1,15:17:39.13:947,39,0	1/1:6,9:15:33.11:821,33,0	0/0:20,0:20:39.13:0,39,658	1/1:6,9:15:27.09:674,27,0	1/1:6,21:27:63.22:1543,63,0	1/1:8,25:33:69.23:1723,69,0	1/1:7,17:26:42.14:1049,42,0	1/1:9,21:30:54.19:1343,54,0	1/1:5,15:21:54.17:1262,54,0	1/1:11,16:28:45.15:1118,45,0	1/1:7,34:42:84.29:2098,84,0	1/1:8,20:29:54.19:1319,54,0	0/0:15,0:15:33.08:0,33,522	0/0:30,0:30:75.17:0,75,1155	1/1:6,17:24:36.12:899,36,0	1/1:9,23:33:75.20:1713,75,0	1/1:11,17:28:51.18:1272,51,0	1/1:3,5:8:15.05:374,15,0
chr10	64929705	.	C	CTCAG	15354.40	PASS	AB=0.830;AC=42;AF=0.750;AN=56;BaseQRankSum=-6.306;DP=682;FS=18.564;HRun=0;HaplotypeScore=140.7107;InbreedingCoeff=0.7745;MQ=69.86;MQ0=8;MQRankSum=1.744;QD=32.95;ReadPosRankSum=1.235;VQSLOD=3.3922;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:24,6:29:3.84:856,0,4	1/1:1,5:6:12.04:279,12,0	0/0:58,0:38:34.71:0,35,498	0/0:71,0:44:21.32:0,21,322	1/1:16,0:16:9.15:85,9,0	1/1:11,6:16:33.08:723,33,0	1/1:21,5:26:42.06:919,42,0	1/1:22,14:37:48.11:758,48,0	0/0:30,0:30:66.16:0,66,1007	1/1:15,7:21:45.15:926,45,0	1/1:11,3:13:15.05:329,15,0	1/1:7,24:32:2.19:1068,2,0	0/0:21,0:21:51.17:0,51,824	1/1:6,15:22:24.08:583,24,0	1/1:17,11:28:57.20:1338,57,0	1/1:21,5:26:42.13:915,42,0	1/1:18,7:25:60.18:1256,60,0	1/1:11,10:22:42.05:834,42,0	1/1:14,3:17:30.04:567,30,0	1/1:7,5:11:21.07:500,21,0	1/1:24,8:31:36.12:818,36,0	1/1:8,6:13:23.95:569,24,0	0/0:7,0:7:17.22:0,17,282	0/0:28,0:28:72.21:0,72,1120	0/1:15,4:19:14.42:619,0,14	1/1:15,2:17:24.08:490,24,0	1/1:13,8:21:33.11:755,33,0	1/1:4,7:11:8.99:166,9,0
chr10	64929716	.	A	AGTCAGTCC	2255.26	PASS	AB=1.000;AC=24;AF=0.429;AN=56;BaseQRankSum=11.899;DP=694;FS=15.780;HRun=0;HaplotypeScore=210.1445;InbreedingCoeff=-0.3114;MQ=65.92;MQ0=19;MQRankSum=2.800;QD=5.10;ReadPosRankSum=10.848;VQSLOD=0.2346;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:28:99:111,0,143	0/1:7,0:7:11.72:39,0,12	0/0:64,0:35:50.27:0,50,941	0/0:65,0:38:23.15:0,23,685	1/1:10,4:14:18.02:336,18,0	0/1:16,0:14:0.52:107,0,1	0/1:24,0:24:71.21:126,0,71	0/0:35,0:35:6.58:0,7,306	0/0:27,0:27:72.22:0,72,1676	0/1:27,0:24:93.11:104,0,93	0/1:16,0:14:32.48:47,0,32	0/1:31,0:30:60.08:182,0,60	0/0:20,0:20:57.17:0,57,1412	0/1:22,0:22:20.76:100,0,21	0/1:29,0:28:43.22:210,0,43	1/1:21,0:21:2.47:137,2,0	1/1:23,0:23:14.81:192,15,0	0/1:22,0:21:92.60:128,0,93	0/1:23,0:18:53.83:54,0,150	0/1:15,0:13:47.09:74,0,47	0/1:34,0:31:99:122,0,167	0/1:15,0:14:22.46:89,0,22	0/0:9,0:8:23.98:0,24,498	0/0:31,0:31:87.18:0,87,1955	0/1:19,0:18:89.34:89,0,121	0/1:19,0:18:46.65:47,0,120	0/1:18,0:18:40.65:107,0,41	0/1:14,0:13:20.75:21,0,34
chr10	64930428	.	T	TC	3820.28	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-12.450;DP=653;FS=13.113;HRun=2;HaplotypeScore=78.8003;InbreedingCoeff=0.9984;MQ=80.67;MQ0=0;MQRankSum=-0.189;QD=37.82;ReadPosRankSum=-1.946;VQSLOD=2.2274;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,50:53:99:1985,138,0	0/0:8,0:8:24.08:0,24,297	0/0:16,0:16:48.11:0,48,560	0/0:23,0:23:62.88:0,63,713	1/1:2,16:18:45.15:645,45,0	0/0:25,0:25:66.19:0,66,805	0/0:23,0:23:66.19:0,66,802	1/1:1,29:30:84.27:1190,84,0	0/0:24,0:24:57.18:0,57,706	0/0:15,0:15:42.13:0,42,521	0/0:16,0:16:45.14:0,45,557	0/0:26,0:26:63.20:0,63,780	0/0:26,0:26:72.22:0,72,892	0/0:19,0:19:54.15:0,54,653	0/0:26,0:26:75.24:0,75,927	0/0:28,0:28:81.25:0,81,1001	0/0:47,0:47:99:0,135,1659	0/0:23,0:23:69.18:0,69,838	0/0:20,0:20:51.12:0,51,632	0/0:17,0:17:51.16:0,51,632	0/0:46,0:46:99:0,132,1636	0/0:12,0:12:36.11:0,36,441	0/0:17,0:17:48.15:0,48,595	0/0:31,0:31:90.28:0,90,1115	0/0:13,0:13:39.12:0,39,483	0/0:18,0:18:51.16:0,51,632	0/0:24,0:24:66.21:0,66,818	0/0:9,0:9:24.07:0,24,296
chr10	64930635	.	GC	G	649.24	PASS	AC=2;AF=0.037;AN=54;BaseQRankSum=2.129;DP=363;FS=20.686;HRun=3;HaplotypeScore=72.8007;InbreedingCoeff=0.5637;MQ=32.61;MQ0=55;MQRankSum=-4.337;QD=24.97;ReadPosRankSum=-0.849;VQSLOD=1.8983;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:10:20.95:0,21,278	0/0:2,0:2:6.02:0,6,86	0/0:11,0:6:15.05:0,15,216	0/0:9,0:4:12.04:0,12,173	0/0:16,0:11:6.02:0,6,86	0/0:12,0:8:12:0,12,149	0/0:11,0:7:18.06:0,18,258	1/1:5,21:21:60.19:743,60,0	0/0:23,0:21:54.18:0,54,776	0/0:9,0:6:18.06:0,18,259	0/0:13,0:7:15.05:0,15,214	0/0:10,0:6:15.05:0,15,215	0/0:33,0:32:78.26:0,78,1121	0/0:8,0:5:15.05:0,15,215	0/0:9,0:5:15.05:0,15,215	0/0:11,0:8:15.01:0,15,192	0/0:12,0:4:12.01:0,12,150	0/0:8,0:5:15.05:0,15,215	0/0:19,0:11:29.99:0,30,363	0/0:11,0:10:18.06:0,18,258	0/0:10,0:2:3.01:0,3,43	0/0:6,0:6:9.03:0,9,128	0/0:13,0:13:29.78:0,30,430	0/0:24,0:21:60.11:0,60,817	0/0:9,0:7:12.04:0,12,172	0/0:12,0:9:15.05:0,15,215	0/0:13,0:9:24.08:0,24,344	./.
chr10	64930663	.	G	GA	83.10	PASS	AC=2;AF=0.037;AN=54;BaseQRankSum=3.007;DP=300;FS=5.161;HRun=0;HaplotypeScore=70.3593;InbreedingCoeff=0.3074;MQ=54.24;MQ0=24;MQRankSum=-1.723;QD=9.23;ReadPosRankSum=-0.901;VQSLOD=2.9626;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:7:8.98:0,9,72	0/0:1,0:1:2.99:0,3,23	0/0:34,0:22:60.17:0,60,782	0/0:29,0:18:45.15:0,45,616	1/1:2,7:8:12.04:168,12,0	0/0:9,0:5:8.97:0,9,71	0/0:7,0:4:11.97:0,12,95	0/0:27,0:20:44.02:0,44,284	0/0:20,0:20:57.19:0,57,797	0/0:2,0:1:2.97:0,3,20	0/0:8,0:5:8.99:0,9,73	0/0:3,0:2:5.99:0,6,48	0/0:32,0:32:90.30:0,90,1257	./.	0/0:8,0:3:8.98:0,9,72	0/0:6,0:3:5.99:0,6,48	0/0:8,0:5:5.98:0,6,46	0/0:8,0:8:23.89:0,24,180	0/0:5,0:3:6.40:0,6,41	0/0:4,0:4:8.98:0,9,72	0/0:2,0:2:2.99:0,3,24	0/0:2,0:2:5.99:0,6,49	0/0:12,0:12:36.12:0,36,503	0/0:25,0:25:60.20:0,60,839	0/0:7,0:4:5.99:0,6,48	0/0:13,0:10:17.91:0,18,134	0/0:5,0:3:5.97:0,6,45	0/0:3,0:3:8.95:0,9,66
chr10	64930675	.	A	AT	2335.45	PASS	AC=38;AF=0.731;AN=52;BaseQRankSum=10.837;DP=285;FS=15.122;HRun=0;HaplotypeScore=64.5306;InbreedingCoeff=0.7526;MQ=62.25;MQ0=19;MQRankSum=-9.424;QD=23.12;ReadPosRankSum=4.937;VQSLOD=3.9979;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,4:3:9.03:133,9,0	1/1:0,1:1:3.01:48,3,0	0/0:34,0:27:78.26:0,78,1079	0/0:27,0:21:60.16:0,60,801	1/1:2,8:9:15.05:239,15,0	1/1:1,6:4:9.03:143,9,0	./.	0/0:31,0:24:57.12:0,57,791	0/0:19,0:19:54.18:0,54,755	1/1:0,2:1:3.01:48,3,0	1/1:2,3:4:9.03:143,9,0	1/1:0,2:2:6.02:95,6,0	0/0:27,0:27:75.04:0,75,1007	./.	1/1:0,7:4:12.04:181,12,0	1/1:1,6:4:9.03:133,9,0	1/1:1,10:5:8.90:110,9,0	1/1:1,6:7:18.02:258,18,0	1/1:0,2:1:3.01:48,3,0	1/1:0,3:3:9.03:143,9,0	1/1:0,2:2:5.74:30,6,0	1/1:0,3:3:6.02:95,6,0	0/0:14,0:14:36.12:0,36,502	0/0:27,0:27:75.14:0,75,968	1/1:1,4:2:6.02:95,6,0	1/1:3,10:10:20.99:303,21,0	1/1:0,7:4:9.03:133,9,0	1/1:0,3:3:9.03:143,9,0
chr10	64931127	.	A	AT	999	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-6.154;DP=478;FS=14.690;HRun=6;HaplotypeScore=45.2825;InbreedingCoeff=0.9324;MQ=73.85;MQ0=0;MQRankSum=-1.253;QD=32.23;ReadPosRankSum=1.284;VQSLOD=2.5461;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,31:31:87.28:1094,87,0	0/0:5,0:5:15.03:0,15,153	0/0:11,0:11:29.66:0,30,284	0/0:5,0:5:15.02:0,15,146	0/0:15,0:15:42.08:0,42,422	0/0:11,0:11:33.07:0,33,336	0/0:19,0:19:54.11:0,54,544	0/0:30,0:30:81.16:0,81,813	0/0:24,0:24:63.12:0,63,634	0/0:14,0:14:36.08:0,36,367	0/0:12,0:12:36.08:0,36,367	0/0:18,0:18:48.09:0,48,483	0/0:18,0:18:45.07:0,45,450	0/0:15,0:15:42.10:0,42,429	0/0:19,0:19:54.12:0,54,550	0/0:16,0:16:39.05:0,39,389	0/0:24,0:24:69.16:0,69,704	0/0:24,0:24:69.16:0,69,704	0/0:21,0:21:57.12:0,57,574	0/0:17,0:17:48.11:0,48,490	0/0:29,0:29:78.16:0,78,789	0/0:10,0:10:30.07:0,30,306	0/0:15,0:15:36.08:0,36,367	0/0:17,0:17:45.07:0,45,444	0/0:26,0:26:69.15:0,69,704	0/0:7,0:7:18.04:0,18,184	0/0:21,0:21:60.13:0,60,612	0/0:4,0:4:12.03:0,12,122
chr10	64931818	.	GC	G	658.52	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.618;DP=734;FS=0.000;HRun=4;HaplotypeScore=132.3630;InbreedingCoeff=0.9919;MQ=87.33;MQ0=0;MQRankSum=-3.835;QD=17.80;ReadPosRankSum=-3.695;VQSLOD=1.7276;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:62,0:62:99:0,172,2348	0/0:7,0:7:18.06:0,18,236	0/0:25,0:25:63:0,63,841	0/0:29,0:29:72.20:0,72,966	0/0:21,0:21:57.18:0,57,750	0/0:25,0:25:69.03:0,69,902	0/0:24,0:24:63.79:0,64,843	1/1:23,14:37:90.69:753,91,0	0/0:30,0:30:84.28:0,84,1174	0/0:24,0:24:63.20:0,63,807	0/0:14,0:14:39.11:0,39,493	0/0:30,0:30:90.28:0,90,1154	0/0:23,0:23:66.16:0,66,881	0/0:30,0:30:90.27:0,90,1154	0/0:32,0:32:89.48:0,89,1117	0/0:17,0:17:45.14:0,45,582	0/0:24,0:24:57.01:0,57,780	0/0:20,0:20:48.09:0,48,615	0/0:32,0:32:80.40:0,80,1056	0/0:19,0:19:54.15:0,54,674	0/0:36,0:35:99:0,108,1388	0/0:29,0:29:81.22:0,81,1010	0/0:16,0:16:45.12:0,45,610	0/0:32,0:32:96.31:0,96,1322	0/0:18,0:18:48.16:0,48,633	0/0:32,0:32:90.18:0,90,1222	0/0:31,0:31:90.23:0,90,1137	0/0:14,0:14:42.14:0,42,552
chr10	64931824	.	G	GA	1238.37	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=1.623;DP=728;FS=3.085;HRun=1;HaplotypeScore=138.7921;InbreedingCoeff=0.9919;MQ=85.90;MQ0=0;MQRankSum=-2.022;QD=32.59;ReadPosRankSum=-5.567;VQSLOD=1.7579;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:58:99:0,172,2391	0/0:7,0:7:18.06:0,18,235	0/0:21,0:21:56.14:0,56,761	0/0:27,0:27:69.21:0,69,900	0/0:20,0:20:57.19:0,57,746	0/0:26,0:26:75.01:0,75,887	0/0:28,0:28:77.06:0,77,955	1/1:22,16:38:99:1333,105,0	0/0:29,0:29:81.27:0,81,1131	0/0:26,0:26:69.13:0,69,861	0/0:13,0:13:37:0,37,467	0/0:31,0:31:89.19:0,89,1153	0/0:22,0:22:66.22:0,66,920	0/0:30,0:30:90.14:0,90,1128	0/0:32,0:32:87.23:0,87,1084	0/0:20,0:20:49.98:0,50,637	0/0:25,0:25:65.92:0,66,811	0/0:18,0:18:45.15:0,45,594	0/0:29,0:29:84.27:0,84,1098	0/0:21,0:21:55.81:0,56,665	0/0:38,0:37:99:0,114,1435	0/0:27,0:27:75.66:0,76,953	0/0:16,0:16:48.15:0,48,653	0/0:32,0:32:93.26:0,93,1248	0/0:19,0:19:54.17:0,54,682	0/0:31,0:31:93.30:0,93,1240	0/0:28,0:28:79.61:0,80,1034	0/0:16,0:16:48.12:0,48,597
chr10	64931880	.	A	AG	25476.31	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=-6.354;DP=872;FS=1.524;HRun=1;HaplotypeScore=92.0976;InbreedingCoeff=0.9996;MQ=90.40;MQ0=0;MQRankSum=-6.703;QD=41.36;ReadPosRankSum=1.944;VQSLOD=5.2010;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:58:99:0,172,2189	1/1:0,14:14:42.14:629,42,0	0/0:31,0:31:87.28:0,87,1120	0/0:36,0:36:99:0,105,1331	1/1:3,21:24:57.19:851,57,0	1/1:0,23:23:66.22:989,66,0	1/1:4,36:40:99:1619,108,0	1/1:1,29:30:87.29:1301,87,0	0/0:38,1:39:69.40:0,69,1396	1/1:0,40:40:99:1756,120,0	1/1:1,21:22:63.21:944,63,0	1/1:2,34:36:99:1484,99,0	0/0:30,0:30:87.27:0,87,1113	1/1:1,32:33:96.33:1439,96,0	1/1:0,30:30:81.27:1214,81,0	1/1:0,27:27:75.25:1123,75,0	1/1:1,28:29:72.24:1079,72,0	1/1:3,28:31:81.27:1203,81,0	1/1:3,27:30:84.27:1232,84,0	1/1:0,31:31:84.28:1259,84,0	1/1:5,36:41:99:1529,102,0	1/1:0,36:36:99:1619,108,0	0/0:27,0:27:81.26:0,81,1050	0/0:35,0:35:99:0,102,1325	1/1:0,27:27:75.25:1124,75,0	1/1:2,34:36:99:1508,102,0	1/1:0,28:27:81.27:1214,81,0	1/1:0,8:8:24.08:360,24,0
chr10	64933020	.	G	GTTA	1162.27	PASS	AB=1.000;AC=3;AF=0.056;AN=54;BaseQRankSum=-6.096;DP=360;FS=1.775;HRun=0;HaplotypeScore=73.4500;InbreedingCoeff=0.4647;MQ=68.66;MQ0=0;MQRankSum=-1.709;QD=25.83;ReadPosRankSum=-3.090;VQSLOD=2.8659;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:63.17:0,63,887	0/0:9,0:9:27.07:0,27,381	0/0:9,0:9:6.02:0,6,88	0/1:5,0:4:1.41:1,0,15	0/0:11,0:11:33.05:0,33,434	0/0:21,0:21:63.19:0,63,908	0/0:8,0:8:18.05:0,18,240	1/1:17,20:40:66.18:1256,66,0	0/0:7,0:7:15.02:0,15,201	0/0:25,0:25:66.22:0,66,977	0/0:7,0:7:21.05:0,21,295	0/0:11,0:11:18.04:0,18,230	0/0:5,0:5:9.03:0,9,135	0/0:3,0:3:6.02:0,6,90	0/0:14,0:14:30.09:0,30,431	0/0:6,0:6:12.03:0,12,160	0/0:30,0:30:87.24:0,87,1234	0/0:21,0:21:48.16:0,48,722	0/0:14,0:14:39.12:0,39,551	0/0:3,0:3:9.03:0,9,135	0/0:2,0:2:3.01:0,3,45	./.	0/0:9,0:9:21.06:0,21,296	0/0:2,0:2:3.01:0,3,45	0/0:14,0:14:39.11:0,39,564	0/0:13,0:13:33.10:0,33,478	0/0:23,0:23:51.17:0,51,762	0/0:16,0:16:45.10:0,45,613
chr10	64933039	.	T	TTA	160.15	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=-2.245;DP=318;FS=1.628;HRun=0;HaplotypeScore=62.6005;InbreedingCoeff=0.3400;MQ=69.87;MQ0=1;MQRankSum=2.459;QD=7.63;ReadPosRankSum=-0.504;VQSLOD=3.0386;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:45.14:0,45,563	0/0:9,0:9:21.07:0,21,263	0/0:5,0:4:3.01:0,3,37	0/1:12,0:10:0.71:1,0,32	1/1:3,6:9:15.05:248,15,0	0/0:19,0:19:45.14:0,45,562	0/0:7,0:7:18.06:0,18,225	0/0:32,0:32:72.22:0,72,888	0/0:5,0:5:15.05:0,15,188	0/0:23,0:23:60.17:0,60,729	0/0:8,0:8:18.06:0,18,225	0/0:4,0:4:9.02:0,9,102	0/0:4,0:4:9.03:0,9,113	0/0:3,0:3:3.01:0,3,38	0/0:14,0:14:36.10:0,36,439	0/0:3,0:3:9.03:0,9,113	0/0:31,0:31:66.20:0,66,812	0/0:19,0:19:51.16:0,51,638	0/0:18,0:18:42.11:0,42,511	0/0:5,0:5:9.03:0,9,113	0/0:2,0:2:2.99:0,3,23	0/0:1,0:1:3:0,3,26	0/0:4,0:4:6.02:0,6,75	0/0:2,0:2:3.01:0,3,38	0/0:14,0:14:30.09:0,30,365	0/0:11,0:11:30.10:0,30,375	0/0:17,0:17:36.11:0,36,450	0/0:13,0:13:36.12:0,36,450
chr10	64933456	.	T	TCACA	3722.93	PASS	AB=1.000;AC=41;AF=0.732;AN=56;BaseQRankSum=8.465;DP=705;FS=18.837;HRun=0;HaplotypeScore=169.0349;InbreedingCoeff=0.6747;MQ=61.64;MQ0=21;MQRankSum=-4.664;QD=8.66;ReadPosRankSum=-4.739;VQSLOD=0.4689;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:30:21.92:192,22,0	1/1:5,2:8:1.25:3,1,0	0/0:84,0:28:9.08:0,9,271	0/0:73,0:29:29.75:0,30,376	0/1:25,0:25:34.95:35,0,115	1/1:19,1:21:13.72:219,14,0	1/1:15,0:29:8.62:97,9,0	1/1:35,0:35:55.61:631,56,0	0/0:26,0:26:63.20:0,63,1023	1/1:20,0:19:37.35:447,37,0	1/1:7,0:7:0.75:2,1,0	1/1:23,0:23:3.98:71,4,0	0/0:16,0:16:39.10:0,39,623	1/1:18,0:31:24.04:400,24,0	1/1:6,1:18:3.01:71,3,0	1/1:12,0:22:12.04:216,12,0	1/1:7,0:23:12.04:211,12,0	1/1:22,0:22:22.31:228,22,0	1/1:7,0:6:8.92:63,9,0	0/0:7,4:11:3.69:0,4,30	1/1:28,0:28:19.14:184,19,0	1/1:23,0:22:3.94:47,4,0	0/0:17,0:18:42.12:0,42,645	0/0:42,0:46:99:0,108,1651	1/1:9,8:17:3.63:119,4,0	1/1:12,0:12:14.04:148,14,0	1/1:9,11:21:17.94:295,18,0	1/1:6,0:6:5.96:44,6,0
chr10	64933473	.	CAG	C	2683.82	PASS	AB=0.992;AC=32;AF=0.571;AN=56;BaseQRankSum=4.756;DP=735;FS=5.549;HRun=0;HaplotypeScore=147.6473;InbreedingCoeff=0.1818;MQ=46.57;MQ0=23;MQRankSum=0.545;QD=5.91;ReadPosRankSum=-8.542;VQSLOD=-0.0792;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:31,0:30:6.80:201,0,7	1/1:7,0:7:5.48:36,5,0	0/0:74,0:18:10.47:0,10,394	0/0:83,0:21:8.58:0,9,387	0/1:21,2:23:71.52:175,0,72	1/1:23,0:23:20.86:163,21,0	1/1:27,2:29:13.33:138,13,0	0/1:35,0:35:89.83:279,0,90	0/0:25,0:25:72.19:0,72,1238	0/1:23,0:22:62.72:116,0,63	1/1:9,0:9:8.93:72,9,0	1/1:22,0:22:18:147,18,0	0/0:19,0:19:47.07:0,47,782	1/1:28,0:28:5.24:108,5,0	1/1:19,0:19:8.55:104,9,0	1/1:20,0:20:2.54:118,3,0	1/1:26,0:26:8.96:207,9,0	0/1:22,0:22:32.30:206,0,32	0/1:13,0:12:16.20:126,0,16	0/0:9,0:9:3.75:0,4,21	1/1:41,0:41:9.20:260,9,0	0/1:24,0:22:6.91:59,0,7	0/0:25,0:24:53.16:0,53,850	0/0:44,0:44:67.72:0,68,1807	0/1:18,0:17:8.06:14,0,8	0/1:18,0:18:13.55:197,0,14	0/1:18,0:18:14.89:36,0,15	1/1:5,0:5:14.83:106,15,0
chr10	64934238	.	A	AT	747.90	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.518;DP=582;FS=4.116;HRun=0;HaplotypeScore=80.4737;InbreedingCoeff=0.9905;MQ=92.67;MQ0=0;MQRankSum=-3.439;QD=27.70;ReadPosRankSum=-2.945;VQSLOD=2.8531;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,108,1503	0/0:6,0:6:18.06:0,18,251	0/0:30,0:30:84.22:0,84,1104	0/0:23,0:23:63.12:0,63,795	0/0:19,0:19:51.17:0,51,708	0/0:20,0:20:57.17:0,57,765	0/0:21,0:21:63.20:0,63,861	1/1:3,24:27:65.46:843,65,0	0/0:24,0:24:72.24:0,72,988	0/0:23,0:23:66.20:0,66,885	0/0:13,0:13:39.10:0,39,508	0/0:23,0:23:69.23:0,69,962	0/0:12,0:12:36.12:0,36,498	0/0:28,0:28:84.28:0,84,1173	0/0:22,0:22:60.17:0,60,815	0/0:25,0:25:72.21:0,72,969	0/0:24,0:24:72.24:0,72,1004	0/0:28,0:28:84.28:0,84,1174	0/0:14,0:14:30.10:0,30,402	0/0:20,0:20:60.13:0,60,814	0/0:45,0:45:99:0,135,1861	0/0:11,0:11:33.11:0,33,461	0/0:10,0:10:30.08:0,30,401	0/0:14,0:14:42.14:0,42,586	0/0:16,0:16:48.13:0,48,640	0/0:18,0:18:54.17:0,54,739	0/0:14,0:14:42.14:0,42,584	0/0:15,0:15:45.15:0,45,629
chr10	64934480	.	GTT	G	14188.41	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=7.432;DP=699;FS=4.130;HRun=9;HaplotypeScore=118.1802;InbreedingCoeff=0.9981;MQ=76.05;MQ0=1;MQRankSum=-2.323;QD=27.66;ReadPosRankSum=0.582;VQSLOD=4.4690;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:45:61.43:0,61,272	1/1:2,10:12:30.08:350,30,0	0/0:33,0:28:50.55:0,51,842	0/0:17,0:18:30.32:0,30,394	1/1:2,24:26:60.16:698,60,0	1/1:3,25:28:66.18:769,66,0	1/1:4,18:22:39.11:454,39,0	1/1:4,26:30:78.16:864,78,0	0/0:23,0:23:60.20:0,60,983	1/1:5,25:30:75.20:861,75,0	1/1:1,20:21:48.13:559,48,0	1/1:1,23:24:63.19:734,63,0	0/0:20,0:20:60.19:0,60,953	1/1:3,25:28:66.19:769,66,0	1/1:1,28:29:69.20:804,69,0	1/1:1,26:27:19.96:720,20,0	1/1:0,27:29:71.69:793,72,0	1/1:0,18:17:42.12:488,42,0	1/1:4,16:20:48.13:559,48,0	1/1:2,21:23:60.15:692,60,0	1/1:2,42:44:99:1363,117,0	1/1:3,14:17:33.09:385,33,0	0/0:17,0:18:50.66:0,51,797	0/0:29,0:29:81.26:0,81,1288	1/1:2,15:17:42.12:489,42,0	1/1:3,19:22:57.16:660,57,0	1/1:3,27:30:81.22:932,81,0	1/1:3,13:16:21.06:245,21,0
chr10	64934902	.	AT	A	577.86	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=7.495;DP=611;FS=0.651;HRun=10;HaplotypeScore=61.9610;InbreedingCoeff=0.7143;MQ=69.37;MQ0=0;MQRankSum=0.168;QD=11.79;ReadPosRankSum=-2.781;VQSLOD=2.4954;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:78.01:0,78,824	0/0:9,0:10:26.91:0,27,280	0/1:16,0:13:0.51:1,0,171	0/0:7,0:7:12.03:0,12,133	0/0:40,1:42:82.05:0,82,1107	0/0:22,0:24:62.77:0,63,644	0/0:20,0:20:54.11:0,54,579	1/1:7,26:33:77.94:672,78,0	0/0:28,0:28:75.16:0,75,811	0/0:27,0:27:69.19:0,69,763	0/0:34,0:37:99:0,108,1106	0/0:16,1:17:19.03:0,19,425	0/0:16,0:16:45.11:0,45,486	0/0:16,0:16:45.12:0,45,498	0/0:25,0:25:72.19:0,72,796	0/0:20,2:22:8.04:0,8,537	0/0:20,1:21:34.11:0,34,604	0/0:15,0:15:42.07:0,42,443	0/0:15,1:17:21.96:0,22,447	0/0:30,1:31:64.17:0,64,921	0/0:16,0:16:39.11:0,39,431	0/0:22,0:22:54.15:0,54,597	0/0:20,0:20:60.16:0,60,664	0/0:16,0:16:45.11:0,45,489	0/0:24,0:25:70.82:0,71,741	0/0:23,0:23:57.15:0,57,623	0/0:23,1:25:48.98:0,49,751	0/0:10,0:11:32.91:0,33,337
chr10	64935143	.	C	CATACACA	2551.37	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-4.937;DP=623;FS=0.000;HRun=0;HaplotypeScore=206.4767;InbreedingCoeff=0.9715;MQ=75.49;MQ0=0;MQRankSum=-7.312;QD=110.93;ReadPosRankSum=-2.080;VQSLOD=3.7995;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:35:99:0,105,2722	0/0:5,0:5:15.04:0,15,315	0/0:15,0:15:16.17:0,16,639	0/0:12,0:12:27.04:0,27,444	0/0:22,0:22:66.21:0,66,1655	0/0:22,0:22:66.16:0,66,1558	0/0:32,0:32:93.27:0,93,2316	1/1:10,13:23:66.23:2646,66,0	0/0:20,0:20:57.18:0,57,1491	0/0:24,0:24:69.20:0,69,1673	0/0:14,0:14:42.14:0,42,1079	0/0:32,0:32:95.97:0,96,2373	0/0:21,0:21:60.09:0,60,1455	0/0:25,0:25:69.18:0,69,1615	0/0:27,0:27:81.21:0,81,1868	0/0:16,0:16:48.16:0,48,1287	0/0:22,0:22:66.16:0,66,1586	0/0:13,0:13:39.12:0,39,909	0/0:34,0:34:99:0,102,2361	0/0:14,0:14:41.99:0,42,965	0/0:43,0:43:99:0,120,2878	0/0:20,0:20:57.16:0,57,1415	0/0:13,0:13:36.11:0,36,923	0/0:28,0:28:81.26:0,81,2200	0/0:22,0:22:66.15:0,66,1468	0/0:22,0:22:66.23:0,66,1736	0/0:29,0:29:87.30:0,87,2325	0/0:17,0:17:51.17:0,51,1234
chr10	64935318	.	T	TA	364.83	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.935;DP=658;FS=3.691;HRun=0;HaplotypeScore=71.5910;InbreedingCoeff=0.9997;MQ=75.55;MQ0=0;MQRankSum=-0.948;QD=19.20;ReadPosRankSum=-2.503;VQSLOD=4.7515;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:96.29:0,96,1297	0/0:12,0:12:36.12:0,36,503	0/0:26,0:24:62.83:0,63,755	0/0:20,0:19:52.25:0,52,596	0/0:30,0:30:83.45:0,83,1083	0/0:36,0:36:99:0,105,1468	0/0:24,0:24:72.22:0,72,973	1/1:5,14:19:40.40:460,40,0	0/0:14,0:14:42.14:0,42,587	0/0:31,0:31:93.29:0,93,1256	0/0:26,0:26:78.25:0,78,1062	0/0:32,0:32:96.31:0,96,1317	0/0:23,0:23:66.20:0,66,890	0/0:21,0:21:63.19:0,63,860	0/0:24,0:24:72.24:0,72,1005	0/0:14,0:14:42.14:0,42,586	0/0:22,0:22:66.20:0,66,887	0/0:21,0:21:57.13:0,57,747	0/0:23,0:23:69.21:0,69,919	0/0:31,0:31:93.30:0,93,1284	0/0:23,0:23:69.22:0,69,946	0/0:31,0:31:90.27:0,90,1208	0/0:20,0:20:57.19:0,57,797	0/0:20,0:20:54.17:0,54,735	0/0:16,0:16:48.15:0,48,647	0/0:21,0:21:63.21:0,63,880	0/0:28,0:28:84.26:0,84,1140	0/0:18,0:18:54.18:0,54,747
chr10	64936065	.	A	AAAT	1314.78	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-1.937;DP=649;FS=5.284;HRun=0;HaplotypeScore=127.4276;InbreedingCoeff=0.9877;MQ=81.50;MQ0=0;MQRankSum=-5.606;QD=48.70;ReadPosRankSum=-4.154;VQSLOD=4.1035;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:93.32:0,93,1473	0/0:14,0:14:33.10:0,33,498	0/0:16,0:16:18.07:0,18,367	0/0:21,0:20:37.71:0,38,533	0/0:19,0:19:54.18:0,54,868	0/0:15,0:15:42.14:0,42,673	0/0:30,0:30:75.24:0,75,1169	1/1:1,25:27:69.22:1410,69,0	0/0:13,0:13:39.13:0,39,612	0/0:26,0:26:63.20:0,63,964	0/0:18,0:18:51.17:0,51,801	0/0:30,0:30:87.26:0,87,1358	0/0:26,0:26:72.22:0,72,1107	0/0:21,0:21:60.20:0,60,950	0/0:23,0:23:66.22:0,66,1048	0/0:23,0:23:63.21:0,63,995	0/0:34,0:34:90.28:0,90,1377	0/0:38,0:38:99:0,105,1635	0/0:25,0:25:72.25:0,72,1155	0/0:15,0:15:42.14:0,42,669	0/0:39,0:39:99:0,111,1736	0/0:29,0:29:78.27:0,78,1239	0/0:9,0:9:24.08:0,24,386	0/0:33,0:32:90.31:0,90,1427	0/0:18,0:18:51.16:0,51,787	0/0:23,0:23:66.13:0,66,1002	0/0:21,0:21:60.17:0,60,926	0/0:8,0:8:24.08:0,24,386
chr10	64936435	.	T	TGGG	1031.66	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-5.602;DP=633;FS=0.000;HRun=4;HaplotypeScore=89.9170;InbreedingCoeff=0.9994;MQ=89.72;MQ0=0;MQRankSum=-3.662;QD=42.99;ReadPosRankSum=-3.791;VQSLOD=1.9694;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,120,1835	0/0:14,0:14:42.14:0,42,642	0/0:26,0:26:66.08:0,66,940	0/0:22,0:22:51.06:0,51,683	0/0:15,0:15:42.12:0,42,615	0/0:12,0:12:36.12:0,36,551	0/0:25,0:25:69.17:0,69,1009	1/1:4,18:24:57.11:1127,57,0	0/0:25,0:25:72.23:0,72,1082	0/0:21,0:21:57.18:0,57,854	0/0:14,0:14:35.09:0,35,541	0/0:31,0:31:84.25:0,84,1242	0/0:15,0:15:36.12:0,36,552	0/0:26,0:26:72.23:0,72,1081	0/0:29,0:29:81.27:0,81,1242	0/0:18,0:18:54.16:0,54,805	0/0:20,0:20:60.19:0,60,898	0/0:20,0:20:54.18:0,54,828	0/0:19,0:19:51.17:0,51,775	0/0:19,0:19:48.13:0,48,689	0/0:41,0:41:99:0,117,1790	0/0:20,0:20:45.15:0,45,684	0/0:26,0:26:75.25:0,75,1148	0/0:25,0:25:69.19:0,69,1005	0/0:20,0:20:57.19:0,57,869	0/0:25,0:25:69.23:0,69,1057	0/0:24,0:24:72.23:0,72,1079	0/0:14,0:14:39.13:0,39,593
chr10	64936580	.	GATAT	G	828.65	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.570;DP=623;FS=6.281;HRun=0;HaplotypeScore=136.3692;InbreedingCoeff=0.9948;MQ=84.44;MQ0=0;MQRankSum=-5.567;QD=41.43;ReadPosRankSum=-2.822;VQSLOD=3.2226;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,135,3636	0/0:7,0:7:21.07:0,21,535	0/0:23,0:23:69.24:0,69,1774	0/0:19,0:19:48.16:0,48,1157	0/0:25,0:24:66.23:0,66,1785	0/0:17,0:17:48.13:0,48,1253	0/0:26,0:26:75.26:0,75,2040	1/1:2,18:20:54.11:924,54,0	0/0:22,0:22:66.23:0,66,1806	0/0:19,0:19:57.20:0,57,1525	0/0:11,0:11:27.09:0,27,732	0/0:33,0:33:93.32:0,93,2498	0/0:18,0:18:54.19:0,54,1391	0/0:14,0:14:39.13:0,39,1068	0/0:21,0:21:57.20:0,57,1513	0/0:29,0:29:84.27:0,84,2240	0/0:37,0:37:99:0,111,2975	0/0:13,0:13:39.13:0,39,1052	0/0:15,0:15:39.12:0,39,987	0/0:25,0:25:69.24:0,69,1871	0/0:30,0:30:90.31:0,90,2452	0/0:22,0:22:51.17:0,51,1351	0/0:25,0:25:69.24:0,69,1873	0/0:30,0:30:90.31:0,90,2465	0/0:19,0:19:51.18:0,51,1382	0/0:18,0:18:51.18:0,51,1397	0/0:23,0:23:60.21:0,60,1629	0/0:17,0:17:51.18:0,51,1370
chr10	64937135	.	CAATAAAGGATTTAA	C	190.43	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=5.411;DP=528;FS=31.488;HRun=0;HaplotypeScore=175.1504;InbreedingCoeff=0.5455;MQ=72.16;MQ0=0;MQRankSum=-4.445;QD=7.93;ReadPosRankSum=-4.302;VQSLOD=-0.0159;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:26:69.24:0,69,3561	0/0:7,0:7:9.03:0,9,405	0/0:37,0:32:90.31:0,90,4904	0/0:22,0:17:42.13:0,42,2239	0/0:10,0:10:30.10:0,30,1586	0/1:18,0:18:0.55:1,0,759	0/0:27,0:27:45.11:0,45,2426	1/1:2,4:6:8.98:273,9,0	0/0:19,0:19:51.18:0,51,3162	0/0:23,0:23:66.23:0,66,3623	0/0:9,0:9:9.03:0,9,467	0/0:24,0:24:14.09:0,14,1422	0/0:22,0:22:66.18:0,66,4089	0/0:22,0:22:19.19:0,19,1714	0/0:19,0:19:15.75:0,16,1032	0/0:11,0:11:7.84:0,8,290	0/0:25,0:25:33.11:0,33,1771	0/0:10,0:10:18.06:0,18,1071	0/0:22,0:22:63.21:0,63,3001	0/0:15,0:15:19.17:0,19,1624	0/0:18,0:18:51.09:0,51,3015	0/0:26,0:26:47.50:0,48,3040	0/0:17,0:17:51.14:0,51,3351	0/0:30,0:30:81.28:0,81,5208	0/0:17,0:17:7.93:0,8,1725	0/0:19,0:19:48.16:0,48,2743	0/0:12,0:12:36.05:0,36,2053	0/0:14,0:14:10.36:0,10,1101
chr10	64937151	.	C	CACACACACACACAT	5733.58	PASS	AB=1.000;AC=39;AF=0.696;AN=56;BaseQRankSum=0.080;DP=559;FS=10.001;HRun=0;HaplotypeScore=176.9816;InbreedingCoeff=0.5081;MQ=57.77;MQ0=4;MQRankSum=-4.491;QD=14.63;ReadPosRankSum=-2.766;VQSLOD=2.7899;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:34,0:32:13.39:13,0,38	0/1:9,0:9:10.93:281,0,11	0/0:35,0:24:29.77:0,30,274	0/0:30,0:15:26.94:0,27,262	1/1:10,0:10:9:182,9,0	1/1:4,15:20:3.01:204,3,0	1/1:31,0:31:15.45:325,15,0	1/1:14,0:13:6.47:327,6,0	0/0:19,0:18:33.01:0,33,725	1/1:18,0:18:29.93:385,30,0	0/0:10,0:10:2.98:0,3,21	1/1:22,0:22:3.01:146,3,0	0/0:23,0:23:41.47:0,41,948	1/1:20,0:20:12.04:442,12,0	1/1:17,0:17:6.02:252,6,0	1/1:13,0:13:6.02:278,6,0	1/1:27,0:27:6.02:252,6,0	1/1:8,0:8:3.01:146,3,0	1/1:23,0:23:8.80:482,9,0	0/1:14,0:14:9.95:282,0,10	1/1:24,0:23:15.33:110,15,0	1/1:26,0:25:3.01:146,3,0	0/0:17,0:17:39.01:0,39,818	0/0:33,0:33:68.93:0,69,2077	1/1:18,0:18:0.37:425,0,0	1/1:20,0:19:20.83:389,21,0	1/1:13,0:13:23.74:378,24,0	1/1:11,0:11:6.02:288,6,0
chr10	64937153	.	C	CACACACACACAT	6756.58	PASS	AB=0.739;AC=37;AF=0.661;AN=56;BaseQRankSum=-2.380;DP=611;FS=6.260;HRun=0;HaplotypeScore=170.0921;InbreedingCoeff=0.4220;MQ=53.86;MQ0=6;MQRankSum=-4.391;QD=15.50;ReadPosRankSum=-1.483;VQSLOD=3.1498;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:31:13.15:13,0,38	0/1:1,8:11:2.99:348,0,3	0/0:32,0:22:32.78:0,33,316	0/0:36,0:15:26.87:0,27,240	1/1:11,0:11:8.99:170,9,0	1/1:19,0:19:3.01:159,3,0	1/1:30,0:30:15.92:375,16,0	0/1:16,0:15:68.68:318,0,69	0/0:19,0:18:33.01:0,33,706	1/1:1,16:24:44.73:730,45,0	0/0:2,8:13:2.50:0,2,9	1/1:6,16:24:5.81:192,6,0	0/0:22,0:22:47.43:0,47,906	1/1:7,12:21:12.04:549,12,0	1/1:5,13:22:6.02:299,6,0	1/1:4,11:19:5.88:341,6,0	0/1:10,16:31:12.49:290,0,12	1/1:3,5:10:3.01:179,3,0	1/1:24,0:24:7.38:434,7,0	0/1:5,10:19:15.11:346,0,15	1/1:25,0:24:14.87:110,15,0	1/1:7,17:33:3.01:179,3,0	0/0:18,0:18:39:0,39,748	0/0:34,0:34:71.87:0,72,1892	1/1:5,12:19:0.37:526,0,0	1/1:20,0:19:19.17:433,19,0	1/1:13,0:13:23.10:410,23,0	1/1:4,7:11:6.02:355,6,0
chr10	64937155	.	C	CACACACACAT	5498.75	PASS	AB=0.996;AC=32;AF=0.571;AN=56;BaseQRankSum=0.839;DP=600;FS=11.201;HRun=0;HaplotypeScore=158.2562;InbreedingCoeff=0.0195;MQ=50.34;MQ0=10;MQRankSum=-4.138;QD=12.53;ReadPosRankSum=1.662;VQSLOD=3.2289;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:31:13.20:13,0,38	0/1:12,0:12:10.96:257,0,11	0/0:32,0:19:32.74:0,33,294	0/0:38,0:15:29.84:0,30,260	0/1:12,0:12:11.94:148,0,12	1/1:19,0:19:3.01:133,3,0	1/1:16,14:31:16.70:301,17,0	0/1:17,0:16:99:301,0,127	0/0:20,0:19:33.01:0,33,649	0/1:24,0:24:19.02:519,0,19	1/1:13,0:13:3:25,3,0	0/1:21,0:21:11.83:128,0,12	0/0:22,0:22:50.25:0,50,830	1/1:20,0:20:12.04:452,12,0	1/1:20,1:21:6.49:288,6,0	0/1:20,0:20:15.64:241,0,16	0/1:29,0:29:12.89:409,0,13	1/1:8,0:8:3.01:134,3,0	0/1:27,0:26:5.24:280,0,5	0/1:18,1:19:6.96:280,0,7	0/1:26,0:25:80.02:80,0,83	0/1:32,0:31:19.35:127,0,19	0/0:15,0:15:42.01:0,42,710	0/0:34,0:34:72:0,72,1685	1/1:17,0:17:0.37:389,0,0	1/1:9,9:17:1.28:359,1,0	1/1:12,0:12:22.73:373,23,0	1/1:8,0:8:6.02:264,6,0
chr10	64937344	.	A	AT	882.97	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=-6.352;DP=638;FS=1.565;HRun=6;HaplotypeScore=64.9944;InbreedingCoeff=0.6935;MQ=67.61;MQ0=0;MQRankSum=2.054;QD=20.53;ReadPosRankSum=-3.823;VQSLOD=2.3704;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:42:99:0,108,1091	0/0:13,0:13:36.06:0,36,359	0/0:16,0:16:39.08:0,39,388	0/1:11,0:11:6.14:6,0,93	0/0:27,0:27:69.11:0,69,693	0/0:24,0:24:54.12:0,54,551	0/0:10,0:10:30.05:0,30,299	1/1:5,26:32:78.25:977,78,0	0/0:21,0:21:60.11:0,60,601	0/0:37,0:36:99:0,105,1056	0/0:25,0:25:75.13:0,75,754	0/0:14,0:14:39.08:0,39,397	0/0:22,0:22:54.07:0,54,534	0/0:20,0:20:51.10:0,51,514	0/0:27,0:27:75.17:0,75,765	0/0:20,0:20:60.06:0,60,585	0/0:26,0:26:72.15:0,72,728	0/0:17,0:17:48.11:0,48,490	0/0:37,0:37:99:0,102,1030	0/0:25,0:25:63.12:0,63,632	0/0:7,0:7:18.04:0,18,184	0/0:18,0:18:48.10:0,48,483	0/0:26,0:26:69.15:0,69,704	0/0:18,0:18:48.11:0,48,490	0/0:32,0:32:81.15:0,81,814	0/0:23,0:23:62.36:0,62,618	0/0:29,0:29:87.16:0,87,876	0/0:18,0:18:45.09:0,45,459
chr10	64937709	.	C	CTT	61.57	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=1.764;DP=667;FS=5.175;HRun=0;HaplotypeScore=109.3799;InbreedingCoeff=0.9681;MQ=79.72;MQ0=0;MQRankSum=-2.450;QD=12.31;ReadPosRankSum=-1.157;VQSLOD=2.5978;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,138,2199	0/0:13,0:13:33.11:0,33,536	0/0:20,0:20:54.12:0,54,786	0/0:24,0:24:66.18:0,66,990	0/0:26,0:26:72.25:0,72,1174	0/0:14,0:14:42.14:0,42,680	0/0:35,0:35:99:0,105,1682	1/1:1,4:5:12.03:147,12,0	0/0:31,0:31:93.32:0,93,1514	0/0:21,0:21:60.19:0,60,935	0/0:20,0:20:57.18:0,57,898	0/0:36,0:36:99:0,108,1683	0/0:26,0:26:78.23:0,78,1220	0/0:30,0:30:90.31:0,90,1457	0/0:24,0:24:72.25:0,72,1173	0/0:31,0:31:93.30:0,93,1488	0/0:28,0:28:84.29:0,84,1365	0/0:14,0:14:39.10:0,39,608	0/0:17,0:17:48.15:0,48,760	0/0:19,0:19:57.18:0,57,906	0/0:35,0:35:96.31:0,96,1536	0/0:14,0:14:42.11:0,42,636	0/0:20,0:20:57.19:0,57,930	0/0:32,0:32:96.33:0,96,1557	0/0:15,0:15:45.15:0,45,734	0/0:17,0:17:45.15:0,45,733	0/0:34,0:34:99:0,102,1660	0/0:15,0:15:45.15:0,45,734
chr10	64938022	.	CTTAT	C	253.50	PASS	AC=8;AF=0.80;AN=10;BaseQRankSum=1.179;DP=44;FS=3.010;HRun=0;HaplotypeScore=26.2311;MQ=91.11;MQ0=1;MQRankSum=1.179;QD=13.34;ReadPosRankSum=1.666;VQSLOD=2.2067;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:6.02:0,6,73	./.	./.	./.	./.	./.	./.	./.	1/1:5,2:7:6.02:95,6,0	./.	./.	./.	1/1:4,2:6:9.03:143,9,0	./.	./.	./.	./.	./.	./.	./.	./.	./.	1/1:4,1:5:3.01:48,3,0	1/1:1,0:0:3.01:45,3,0	./.	./.	./.	./.
chr10	64938136	.	ACCATGTG	A	412.09	PASS	AC=16;AF=0.615;AN=26;BaseQRankSum=4.512;DP=149;FS=67.134;HRun=0;HaplotypeScore=49.4254;InbreedingCoeff=0.5839;MQ=23.41;MQ0=73;MQRankSum=-1.729;QD=24.24;ReadPosRankSum=-0.642;VQSLOD=0.2154;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:21:51.13:0,51,1956	./.	./.	./.	./.	1/1:1,1:1:3.01:52,3,0	./.	./.	0/0:5,0:5:15.05:0,15,625	1/1:0,1:1:3.01:70,3,0	./.	1/1:0,1:1:3.01:66,3,0	0/0:15,0:13:29.75:0,30,1213	./.	1/1:1,1:1:3.01:67,3,0	1/1:2,1:1:3.01:67,3,0	./.	./.	./.	1/1:0,1:1:3.01:67,3,0	./.	./.	0/0:16,0:15:36.12:0,36,1463	0/0:16,1:12:24.08:0,24,927	./.	./.	1/1:1,1:1:3.01:68,3,0	1/1:4,1:1:3.01:70,3,0
chr10	64938183	.	CG	C	460.28	PASS	AC=22;AF=0.647;AN=34;BaseQRankSum=6.320;DP=143;FS=46.868;HRun=3;HaplotypeScore=39.0266;InbreedingCoeff=0.5795;MQ=38.98;MQ0=40;MQRankSum=-5.147;QD=17.05;ReadPosRankSum=3.023;VQSLOD=0.8167;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:33:90.26:0,90,1270	1/1:0,2:1:3.01:37,3,0	./.	0/0:4,0:3:3.01:0,3,40	./.	1/1:0,1:1:3.01:37,3,0	./.	./.	0/0:8,0:8:24.08:0,24,344	1/1:0,1:1:3.01:37,3,0	./.	1/1:0,1:1:3.01:37,3,0	0/0:8,0:8:20.88:0,21,297	./.	1/1:0,2:2:6.02:74,6,0	1/1:2,1:1:3.01:37,3,0	1/1:3,1:1:3.01:37,3,0	./.	./.	1/1:0,2:2:6.02:74,6,0	./.	1/1:0,4:3:9.03:111,9,0	0/0:5,0:4:9.02:0,9,111	0/0:30,1:28:32.11:0,32,909	./.	./.	1/1:1,1:1:3.01:37,3,0	1/1:3,2:2:6.02:74,6,0
chr10	64938716	.	AT	A	482.25	PASS	AB=0.791;AC=4;AF=0.200;AN=20;BaseQRankSum=2.740;DP=105;FS=0.000;HRun=13;HaplotypeScore=35.7663;InbreedingCoeff=0.2242;MQ=70.08;MQ0=2;MQRankSum=0.345;QD=8.77;ReadPosRankSum=0.063;VQSLOD=1.5347;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,28:38:70.10:496,70,0	./.	0/1:6,1:2:9.81:10,0,22	0/0:12,0:6:5.94:0,6,56	0/1:5,4:9:14.31:69,0,14	./.	./.	./.	0/0:15,0:15:36.06:0,36,350	./.	./.	./.	0/0:9,0:9:18.02:0,18,170	./.	./.	./.	./.	./.	./.	./.	./.	./.	0/0:5,0:5:9.01:0,9,88	0/0:6,0:6:12:0,12,111	./.	0/0:1,0:1:2.97:0,3,20	0/0:1,0:1:2.97:0,3,20	./.
chr10	64938764	.	ACCATATG	A	62.31	PASS	AC=2;AF=0.111;AN=18;BaseQRankSum=2.344;DP=124;FS=7.155;HRun=0;HaplotypeScore=53.5687;MQ=50.06;MQ0=26;MQRankSum=-2.168;QD=20.77;ReadPosRankSum=0.053;VQSLOD=1.5381;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:66.23:0,66,2700	./.	0/0:4,0:1:3.01:0,3,80	0/0:3,0:3:9.03:0,9,151	0/0:20,0:19:39.13:0,39,1563	./.	./.	./.	0/0:11,0:10:30.10:0,30,1229	./.	./.	./.	0/0:15,0:14:33.11:0,33,1356	./.	./.	./.	./.	1/1:1,2:2:6.02:137,6,0	./.	./.	./.	./.	0/0:4,0:4:12.04:0,12,429	0/0:8,0:8:12.04:0,12,504	./.	./.	./.	./.
chr10	64938855	.	AT	A	744.54	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.173;DP=387;FS=0.728;HRun=8;HaplotypeScore=47.0066;InbreedingCoeff=0.7063;MQ=54.98;MQ0=6;MQRankSum=-0.699;QD=24.02;ReadPosRankSum=-5.685;VQSLOD=1.2430;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,102,1212	0/0:9,0:9:27.08:0,27,325	0/0:5,0:1:2.90:0,3,16	0/0:14,0:8:7.04:0,7,91	0/0:22,0:21:54.17:0,54,652	0/0:22,0:22:63.19:0,63,760	0/0:11,0:11:30.09:0,30,362	1/1:2,29:30:87.14:839,87,0	0/0:9,0:9:24.06:0,24,278	0/0:15,0:15:36.11:0,36,435	0/0:8,0:8:24.01:0,24,271	0/0:6,0:6:18.06:0,18,217	0/0:10,0:10:24.07:0,24,288	0/0:11,0:11:30.09:0,30,362	0/0:5,0:5:15.05:0,15,181	0/0:7,0:7:21.06:0,21,252	0/0:33,0:32:96.29:0,96,1158	0/0:18,0:18:48.11:0,48,563	0/0:18,0:17:36.11:0,36,435	0/0:13,0:13:39.12:0,39,471	0/0:7,0:6:18.06:0,18,217	0/0:4,0:4:12.04:0,12,145	0/0:5,0:5:15.05:0,15,181	0/0:3,0:3:9.03:0,9,109	0/0:13,0:13:33.10:0,33,398	0/0:19,0:19:54.17:0,54,652	0/0:15,0:15:42.11:0,42,494	0/0:17,0:17:51.16:0,51,616
chr10	64940912	.	GT	G	3636.86	PASS	AB=0.803;AC=36;AF=0.643;AN=56;BaseQRankSum=2.563;DP=523;FS=1.678;HRun=15;HaplotypeScore=107.8712;InbreedingCoeff=0.0283;MQ=53.83;MQ0=5;MQRankSum=-4.162;QD=7.92;ReadPosRankSum=2.997;VQSLOD=2.9939;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:18,7:25:19.75:103,0,20	0/1:3,1:4:13.26:13,0,20	0/0:24,0:12:9.28:0,9,60	0/1:12,0:5:3.59:4,0,21	1/1:10,7:37:63.36:363,63,0	1/1:3,15:18:44.32:286,44,0	0/1:12,4:17:16.75:126,0,17	1/1:20,0:21:2.08:24,2,0	0/0:12,1:13:1.73:0,2,136	1/1:9,14:25:29.76:309,30,0	0/1:15,14:29:5.19:239,0,5	1/1:8,5:13:14.44:88,14,0	0/1:12,1:14:6.98:7,0,153	1/1:10,2:12:14.16:107,14,0	1/1:8,8:19:4.41:197,4,0	1/1:10,6:16:26.42:171,26,0	1/1:14,5:19:4.78:141,5,0	0/1:16,2:18:29.64:116,0,30	0/1:10,4:14:29.74:75,0,30	1/1:15,11:26:32.44:280,32,0	0/1:11,3:14:18.90:59,0,19	0/1:13,5:21:15.37:127,0,15	0/0:11,0:12:22.22:0,22,135	0/0:14,0:15:8.06:0,8,174	1/1:7,8:15:34.21:227,34,0	0/1:14,5:20:5.93:73,0,6	1/1:18,11:31:65.43:392,65,0	0/1:8,6:13:24.97:109,0,25
chr10	64940920	.	T	TG	389.67	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=2.697;DP=547;FS=8.796;HRun=0;HaplotypeScore=129.7432;InbreedingCoeff=0.6056;MQ=52.30;MQ0=8;MQRankSum=-3.877;QD=7.35;ReadPosRankSum=-3.391;VQSLOD=2.3390;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:27:12.37:12,0,278	0/0:5,0:5:12.01:0,12,118	0/0:20,0:6:14.35:0,14,121	0/0:13,0:3:8.83:0,9,75	0/0:37,0:37:62.55:0,63,537	0/0:18,0:18:50.80:0,51,397	0/0:21,0:21:56.65:0,57,436	1/1:17,8:24:30.96:481,31,0	0/0:13,0:13:36.04:0,36,382	0/0:26,0:26:76.63:0,77,629	0/0:34,0:33:92.47:0,92,783	0/0:12,0:12:26.91:0,27,220	0/0:15,0:15:39.87:0,40,365	0/0:12,0:12:26.84:0,27,207	0/0:22,0:22:59.97:0,60,491	0/0:17,0:17:47.91:0,48,395	0/0:21,0:20:56.70:0,57,453	0/0:20,0:20:53.77:0,54,449	0/0:17,0:14:41.97:0,42,373	0/0:27,0:27:78.27:0,78,659	0/0:12,0:12:32.80:0,33,269	0/0:22,0:22:62.93:0,63,562	0/0:11,0:11:16.56:0,17,169	0/0:15,0:15:34.43:0,34,387	0/0:17,0:17:50.82:0,51,412	0/0:21,0:20:48.93:0,49,432	0/0:32,0:32:86.61:0,87,685	0/0:14,0:13:38.90:0,39,344
chr10	64940940	.	GT	G	9201.38	PASS	AB=1.000;AC=43;AF=0.768;AN=56;BaseQRankSum=4.312;DP=539;FS=0.000;HRun=8;HaplotypeScore=100.5724;InbreedingCoeff=0.8731;MQ=49.92;MQ0=10;MQRankSum=-3.396;QD=20.54;ReadPosRankSum=1.895;VQSLOD=4.3341;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,17:26:40.66:409,41,0	1/1:0,5:5:12.02:115,12,0	0/0:14,0:3:3.70:0,4,68	0/0:17,0:8:4.69:0,5,101	1/1:3,2:37:87.21:661,87,0	1/1:3,12:15:42.07:404,42,0	1/1:4,17:21:53.30:497,53,0	0/1:13,0:13:1.02:20,0,1	0/0:12,0:12:32.83:0,33,368	1/1:8,22:29:77.33:728,77,0	1/1:8,21:28:65.13:653,65,0	1/1:3,10:13:26.99:249,27,0	0/0:16,0:16:39.08:0,39,441	1/1:3,7:10:16.84:148,17,0	1/1:3,19:22:63.09:602,63,0	1/1:6,15:21:57.08:542,57,0	1/1:2,24:26:48.04:463,48,0	1/1:10,12:22:53.28:461,53,0	1/1:7,7:10:26.40:235,26,0	1/1:2,24:27:79.53:736,80,0	1/1:6,8:13:21.02:200,21,0	1/1:5,14:19:41.98:388,42,0	0/0:16,0:16:48.09:0,48,547	0/0:16,0:16:42.26:0,42,468	1/1:5,14:19:53.94:494,54,0	1/1:3,16:19:45.53:430,46,0	1/1:11,20:31:61.90:552,62,0	1/1:7,7:13:23.78:214,24,0
chr10	64940943	.	T	TG	148.18	PASS	AB=0.923;AC=3;AF=0.054;AN=56;BaseQRankSum=1.990;DP=541;FS=1.528;HRun=0;HaplotypeScore=137.5904;InbreedingCoeff=0.5977;MQ=51.49;MQ0=9;MQRankSum=-2.609;QD=3.80;ReadPosRankSum=-0.189;VQSLOD=3.5587;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:24,3:26:45.94:241,46,0	0/0:7,0:7:14.68:0,15,94	0/1:11,0:3:8.94:9,0,75	0/0:18,0:9:13.13:0,13,141	0/0:36,0:36:39.20:0,39,191	0/0:15,0:15:33.28:0,33,185	0/0:19,0:19:52.59:0,53,313	0/0:14,0:14:37.76:0,38,299	0/0:12,0:12:33.09:0,33,431	0/0:30,0:29:81.93:0,82,506	0/0:30,0:29:79.14:0,79,502	0/0:13,0:13:29.19:0,29,174	0/0:16,0:16:42.12:0,42,540	0/0:11,0:11:23.63:0,24,160	0/0:22,0:22:64.09:0,64,377	0/0:22,0:22:55.53:0,56,324	0/0:26,0:26:30.79:0,31,269	0/0:22,0:22:48.02:0,48,342	0/0:13,0:9:26.41:0,26,166	0/0:28,0:28:78.73:0,79,449	0/0:13,0:12:15.96:0,16,136	0/0:18,0:18:41.02:0,41,246	0/0:17,0:17:51.11:0,51,650	0/0:16,1:17:5.52:0,6,535	0/0:19,0:19:55.67:0,56,338	0/0:20,0:20:53.23:0,53,318	0/0:33,0:33:77.22:0,77,480	0/0:11,0:10:29.43:0,29,189
chr10	64940948	.	TG	T	2621.03	PASS	AB=0.984;AC=34;AF=0.607;AN=56;BaseQRankSum=10.642;DP=545;FS=7.076;HRun=1;HaplotypeScore=119.4496;InbreedingCoeff=0.1864;MQ=55.90;MQ0=8;MQRankSum=-5.348;QD=5.90;ReadPosRankSum=7.260;VQSLOD=0.3772;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:26:55.75:72,0,56	0/1:7,0:7:18.06:18,0,32	0/0:14,0:6:14.82:0,15,135	0/0:20,1:12:2.74:0,3,128	1/1:37,0:37:13.10:236,13,0	1/1:14,0:14:33.40:128,33,0	1/1:19,1:20:16.40:153,16,0	0/1:14,0:14:22.74:168,0,23	0/0:13,0:13:26.01:0,26,338	1/1:28,0:27:16.36:148,16,0	0/1:29,0:29:53.09:161,0,53	0/1:16,0:16:53.04:53,0,63	0/0:17,0:17:41.62:0,42,437	0/1:12,0:12:41.09:41,0,52	1/1:23,0:23:6.07:161,6,0	0/1:21,2:23:2.16:153,0,2	1/1:25,0:25:39.45:171,39,0	1/1:22,1:23:9.57:214,10,0	0/1:15,0:12:35.19:35,0,53	1/1:28,0:28:35.25:204,35,0	0/1:11,1:11:19.32:47,0,19	0/1:19,0:19:26:120,0,26	0/0:18,0:18:50.31:0,50,558	0/0:18,0:18:34.07:0,34,456	1/1:18,0:18:12.34:128,12,0	1/1:18,0:18:1.54:56,2,0	1/1:26,1:27:12.46:259,12,0	1/1:9,0:8:17.86:80,18,0
chr10	64940952	.	TTTTTG	T	782.04	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=3.901;DP=552;FS=6.339;HRun=0;HaplotypeScore=166.1723;InbreedingCoeff=0.5736;MQ=57.08;MQ0=7;MQRankSum=-3.656;QD=14.22;ReadPosRankSum=-0.734;VQSLOD=2.8458;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:26:73.89:0,74,905	0/0:7,0:7:15.05:0,15,365	0/0:17,0:8:23.46:0,23,434	0/0:20,0:12:4.20:0,4,448	0/1:37,0:37:99:138,0,222	0/0:14,0:14:39.13:0,39,888	0/0:20,0:20:57.15:0,57,1341	1/1:14,4:18:46.67:750,47,0	0/0:13,0:13:36.09:0,36,880	0/0:27,0:26:72.23:0,72,1651	0/0:29,0:29:66.53:0,67,1652	0/0:17,0:17:33.11:0,33,732	0/0:17,0:17:45.15:0,45,1141	0/0:12,0:12:27.04:0,27,635	0/0:21,0:21:63.16:0,63,1516	0/0:22,0:22:54.12:0,54,1251	0/0:25,0:25:51.17:0,51,1067	0/0:24,0:24:40.26:0,40,1094	0/0:15,0:12:30.09:0,30,768	0/0:27,0:27:78.26:0,78,1751	0/0:12,0:11:27.56:0,28,612	0/0:20,0:20:50.59:0,51,1185	0/0:19,0:19:51.17:0,51,1417	0/0:18,0:18:48.14:0,48,1179	0/0:20,0:20:54.15:0,54,1239	0/0:20,0:20:55.43:0,55,1365	0/0:25,0:25:53.71:0,54,1035	0/0:9,0:8:16.28:0,16,542
chr10	64940957	.	G	GTTT	775.38	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-0.791;DP=541;FS=6.002;HRun=7;HaplotypeScore=144.2480;InbreedingCoeff=0.9593;MQ=59.71;MQ0=3;MQRankSum=-1.536;QD=45.61;ReadPosRankSum=-3.329;VQSLOD=1.6556;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:26:42.79:0,43,891	0/0:6,0:6:12.04:0,12,177	0/0:19,0:9:26.29:0,26,290	0/0:22,0:15:22.08:0,22,305	0/0:34,0:34:71.73:0,72,1161	0/0:14,0:14:32.13:0,32,444	0/0:20,0:20:56.66:0,57,786	1/1:4,12:17:48.15:870,48,0	0/0:12,0:12:27.06:0,27,398	0/0:27,0:26:60.18:0,60,870	0/0:25,0:25:60.19:0,60,882	0/0:13,0:13:33.11:0,33,468	0/0:17,0:17:44.68:0,45,579	0/0:12,0:12:32.78:0,33,392	0/0:21,0:21:57.17:0,57,822	0/0:20,0:20:51.10:0,51,699	0/0:26,0:26:51.15:0,51,717	0/0:23,0:23:45.18:0,45,653	0/0:15,0:14:33.10:0,33,468	0/0:26,0:27:66.14:0,66,941	0/0:13,0:13:30.07:0,30,410	0/0:19,0:19:53.97:0,54,710	0/0:21,0:21:54.14:0,54,756	0/0:18,0:18:45.06:0,45,591	0/0:20,0:20:54.18:0,54,784	0/0:20,0:20:57.19:0,57,833	0/0:24,0:24:48.93:0,49,584	0/0:8,0:8:20.44:0,20,302
chr10	64941738	.	GAGA	G	1122.90	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.310;DP=704;FS=3.806;HRun=0;HaplotypeScore=96.8334;InbreedingCoeff=0.9951;MQ=91.60;MQ0=0;MQRankSum=-2.814;QD=41.59;ReadPosRankSum=-4.678;VQSLOD=3.0599;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,102,2346	0/0:7,0:7:21.07:0,21,484	0/0:32,0:32:83.99:0,84,1739	0/0:26,0:26:63.15:0,63,1274	0/0:27,0:26:75.26:0,75,1716	0/0:17,0:17:48.16:0,48,1107	0/0:21,0:21:60.21:0,60,1383	1/1:1,26:27:78.22:1218,78,0	0/0:28,0:28:81.28:0,81,1867	0/0:30,0:30:84.06:0,84,1754	0/0:19,0:19:57.20:0,57,1294	0/0:30,0:30:87.25:0,87,1912	0/0:22,0:22:60.21:0,60,1343	0/0:31,0:31:93.32:0,93,2143	0/0:27,0:27:81.28:0,81,1828	0/0:26,0:26:75.21:0,75,1664	0/0:33,0:33:96.32:0,96,2142	0/0:18,0:18:54.19:0,54,1224	0/0:10,0:10:30.10:0,30,675	0/0:31,0:31:93.30:0,93,2057	0/0:42,0:42:99:0,126,2799	0/0:24,0:24:69.23:0,69,1550	0/0:20,0:20:60.21:0,60,1383	0/0:35,0:35:99:0,102,2235	0/0:17,0:17:51.18:0,51,1160	0/0:21,0:21:63.21:0,63,1382	0/0:36,0:36:99:0,102,2287	0/0:13,0:13:31.65:0,32,757
chr10	64943120	.	TC	T	426.12	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.052;DP=643;FS=20.056;HRun=5;HaplotypeScore=65.1548;InbreedingCoeff=0.9974;MQ=69.56;MQ0=1;MQRankSum=1.217;QD=22.43;ReadPosRankSum=-3.642;VQSLOD=1.3388;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,127,1700	0/0:8,0:8:24.08:0,24,328	0/0:30,0:26:64.68:0,65,820	0/0:38,0:30:75.70:0,76,899	0/0:21,0:21:60.19:0,60,792	0/0:17,0:17:48.16:0,48,650	0/0:24,0:24:69.21:0,69,918	1/1:3,16:19:48.09:521,48,0	0/0:27,0:27:78.26:0,78,1067	0/0:25,0:25:75.24:0,75,1012	0/0:18,0:18:54.18:0,54,738	0/0:29,0:29:84.25:0,84,1107	0/0:22,0:22:60.20:0,60,819	0/0:31,0:31:90.28:0,90,1199	0/0:25,0:25:66.22:0,66,896	0/0:19,0:19:51.17:0,51,698	0/0:18,0:18:48.13:0,48,620	0/0:22,0:22:63.16:0,63,825	0/0:14,0:14:42.13:0,42,556	0/0:31,0:31:87.29:0,87,1185	0/0:26,0:26:72.24:0,72,982	0/0:16,0:16:48.14:0,48,638	0/0:20,0:20:51.10:0,51,658	0/0:24,0:24:72.24:0,72,971	0/0:12,0:12:33.11:0,33,451	0/0:24,0:24:63.21:0,63,861	0/0:27,0:27:75.23:0,75,1008	0/0:11,0:11:33.11:0,33,448
chr10	64943365	.	T	TA	773.24	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=-6.150;DP=536;FS=0.000;HRun=8;HaplotypeScore=53.7027;InbreedingCoeff=0.6759;MQ=67.33;MQ0=0;MQRankSum=-2.119;QD=20.35;ReadPosRankSum=-4.213;VQSLOD=1.9811;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:50.99:0,51,454	0/0:6,0:6:17.99:0,18,160	0/0:12,0:9:11.61:0,12,94	0/1:7,0:8:5.78:6,0,44	0/0:23,0:23:57:0,57,516	0/0:21,0:21:51.01:0,51,466	0/0:20,0:20:54.01:0,54,488	1/1:4,26:30:78.17:867,78,0	0/0:19,0:19:44.55:0,45,411	0/0:19,0:19:56.82:0,57,502	0/0:19,0:19:50.98:0,51,459	0/0:22,0:22:48.02:0,48,439	0/0:10,0:10:21:0,21,192	0/0:16,0:16:36.01:0,36,329	0/0:28,0:28:71.97:0,72,643	0/0:15,0:15:42.02:0,42,384	0/0:29,0:29:75.04:0,75,686	0/0:18,0:18:48.03:0,48,439	0/0:22,0:22:51:0,51,462	0/0:27,0:27:72.03:0,72,656	0/0:13,0:13:36.01:0,36,329	0/0:10,0:10:20.99:0,21,188	0/0:23,0:23:51.01:0,51,463	0/0:19,0:19:54:0,54,487	0/0:21,0:21:57:0,57,516	0/0:24,0:24:69.02:0,69,624	0/0:21,0:21:60.01:0,60,544	0/0:21,0:21:63.03:0,63,576
chr10	64943555	.	TA	T	7005.03	PASS	AB=1.000;AC=43;AF=0.768;AN=56;BaseQRankSum=-0.228;DP=508;FS=8.640;HRun=12;HaplotypeScore=55.5957;InbreedingCoeff=0.8974;MQ=56.51;MQ0=3;MQRankSum=0.752;QD=16.68;ReadPosRankSum=2.915;VQSLOD=5.8496;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,28:30:62.28:605,62,0	1/1:2,5:8:16.98:122,17,0	0/0:10,1:3:5.85:0,6,45	0/1:10,0:4:2.58:3,0,39	1/1:6,16:22:44.79:348,45,0	1/1:4,11:15:20.89:162,21,0	1/1:3,12:16:37.89:284,38,0	0/0:8,0:23:57.49:0,57,325	0/0:20,0:20:37.54:0,38,382	1/1:4,13:17:38.83:302,39,0	1/1:4,14:18:20.10:260,20,0	1/1:3,16:19:35.83:275,36,0	0/0:11,0:11:33.06:0,33,331	1/1:3,9:12:23.90:186,24,0	1/1:1,20:21:59.77:464,60,0	1/1:1,14:16:43.88:331,44,0	1/1:4,31:38:94.02:694,94,0	1/1:2,19:22:58.82:447,59,0	1/1:4,11:15:29.85:230,30,0	1/1:4,16:22:42.88:314,43,0	1/1:2,6:8:8.96:70,9,0	1/1:0,16:16:44.83:348,45,0	0/0:7,0:7:15.02:0,15,144	0/0:14,0:14:33.03:0,33,324	1/1:4,18:23:55.82:424,56,0	1/1:4,21:27:60.76:447,61,0	1/1:6,11:16:29.85:232,30,0	1/1:6,22:28:35.31:457,35,0
chr10	64943903	.	AC	A	1635.54	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=8.981;DP=707;FS=14.690;HRun=2;HaplotypeScore=64.9043;InbreedingCoeff=0.9979;MQ=85.54;MQ0=0;MQRankSum=-3.871;QD=32.07;ReadPosRankSum=0.213;VQSLOD=1.9794;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,51:51:99:1730,135,0	0/0:9,0:9:24.08:0,24,359	0/0:23,0:23:54.03:0,54,878	0/0:22,0:22:63.12:0,63,864	0/0:32,0:32:93.21:0,93,1314	0/0:14,0:14:42.13:0,42,606	0/0:23,0:23:63.20:0,63,925	0/0:34,0:34:99:0,102,1490	0/0:27,0:27:78.23:0,78,1110	0/0:33,0:33:96.31:0,96,1406	0/0:22,0:22:63.20:0,63,920	0/0:27,0:27:78.24:0,78,1130	0/0:22,0:22:66.15:0,66,887	0/0:23,0:23:69.19:0,69,991	0/0:30,0:30:90.30:0,90,1328	0/0:29,0:29:87.27:0,87,1263	0/0:36,0:36:99:0,105,1511	0/0:20,0:20:51.16:0,51,744	0/0:21,0:21:63.20:0,63,923	0/0:25,0:25:75.17:0,75,1076	0/0:27,0:27:81.23:0,81,1153	0/0:23,0:23:66.11:0,66,939	0/0:18,0:18:54.18:0,54,809	0/0:21,0:21:63.17:0,63,911	0/0:18,0:18:51.16:0,51,746	0/0:27,0:26:81.26:0,81,1176	0/0:26,0:26:78.25:0,78,1148	0/0:24,0:24:60.91:0,61,1002
chr10	64944162	.	G	GT	15238.55	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-13.300;DP=590;FS=3.220;HRun=1;HaplotypeScore=54.0793;InbreedingCoeff=0.9998;MQ=91.49;MQ0=0;MQRankSum=-4.949;QD=40.74;ReadPosRankSum=3.630;VQSLOD=5.3997;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,141,1774	1/1:1,14:15:39.13:584,39,0	0/0:23,0:23:63.20:0,63,817	0/0:30,0:30:83.33:0,83,1038	1/1:0,10:10:30.10:449,30,0	1/1:1,16:17:42.14:630,42,0	1/1:1,25:26:72.24:1077,72,0	0/0:26,0:26:66.20:0,66,832	0/0:19,0:19:57.19:0,57,740	1/1:0,25:25:75.25:1123,75,0	1/1:0,16:16:45.11:649,45,0	1/1:1,18:19:45.15:675,45,0	0/0:17,0:17:48.14:0,48,609	1/1:0,18:18:48.16:720,48,0	1/1:0,16:16:45.15:675,45,0	1/1:1,15:16:36.12:540,36,0	1/1:0,24:24:69.23:1034,69,0	1/1:0,18:18:51.17:764,51,0	1/1:1,19:21:63.21:929,63,0	1/1:1,12:13:36.08:514,36,0	1/1:0,29:29:84.28:1259,84,0	1/1:0,18:18:48.12:694,48,0	0/0:19,0:19:54.18:0,54,701	0/0:34,1:35:48.31:0,48,1108	1/1:0,21:20:57.15:829,57,0	1/1:0,22:22:63.20:925,63,0	1/1:2,13:15:33.11:494,33,0	1/1:0,15:15:45.15:674,45,0
chr10	64944469	.	T	TAC	3619.10	PASS	AB=1.000;AC=45;AF=0.804;AN=56;BaseQRankSum=6.361;DP=516;FS=4.672;HRun=0;HaplotypeScore=179.4317;InbreedingCoeff=0.7148;MQ=63.47;MQ0=4;MQRankSum=-6.093;QD=9.00;ReadPosRankSum=-2.231;VQSLOD=3.0874;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:16,31:50:68.21:1140,68,0	1/1:11,0:11:11.95:94,12,0	0/1:41,0:30:11.35:11,0,269	0/0:32,0:20:26.87:0,27,316	1/1:11,0:11:5.51:38,6,0	1/1:17,0:17:13.82:126,14,0	1/1:29,0:26:17.39:144,17,0	1/1:20,0:17:29.29:259,29,0	0/0:19,0:19:51.16:0,51,615	1/1:22,0:21:41.64:300,42,0	1/1:12,0:12:5.95:48,6,0	1/1:18,0:18:23.10:206,23,0	0/0:19,0:20:54:0,54,629	1/1:10,0:10:11.99:103,12,0	1/1:13,0:13:6:67,6,0	1/1:12,0:12:14.98:126,15,0	1/1:8,1:13:8.77:66,9,0	1/1:15,0:15:20.94:182,21,0	1/1:16,0:15:20.69:167,21,0	1/1:8,0:8:5.59:35,6,0	1/1:18,0:17:8.47:55,8,0	1/1:12,0:12:3.01:46,3,0	0/0:15,0:17:44.78:0,45,485	0/0:24,0:26:62.84:0,63,703	1/1:17,0:16:5.83:34,6,0	1/1:14,0:13:28.31:184,28,0	1/1:16,0:16:17.89:104,18,0	1/1:7,0:7:13.81:84,14,0
chr10	64945140	.	TA	T	6130.47	PASS	AB=1.000;AC=45;AF=0.804;AN=56;BaseQRankSum=4.812;DP=444;FS=4.273;HRun=12;HaplotypeScore=46.0642;InbreedingCoeff=0.8447;MQ=60.56;MQ0=4;MQRankSum=-0.546;QD=16.35;ReadPosRankSum=0.672;VQSLOD=5.7865;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,15:20:34.89:261,35,0	1/1:0,9:9:26.90:209,27,0	0/1:14,0:7:22.56:23,0,55	0/0:10,0:4:7.13:0,7,64	1/1:0,22:22:56.76:441,57,0	1/1:0,17:17:41.82:325,42,0	1/1:2,7:9:17.93:139,18,0	1/1:9,19:23:41.68:313,42,0	0/0:15,1:16:19.18:0,19,367	1/1:3,14:16:41.84:325,42,0	1/1:4,14:18:14.41:295,14,0	1/1:2,10:12:23.89:186,24,0	0/0:15,0:15:39.08:0,39,396	1/1:1,9:10:20.90:162,21,0	1/1:1,7:8:17.86:133,18,0	1/1:4,5:9:11.95:93,12,0	1/1:3,32:35:77.70:603,78,0	1/1:1,7:8:19.97:145,20,0	1/1:2,10:13:28.70:200,29,0	1/1:2,19:21:47.67:361,48,0	1/1:2,16:18:39.32:303,39,0	1/1:0,7:7:17.93:139,18,0	0/0:19,1:20:30.79:0,31,469	0/0:7,0:7:14.99:0,15,141	1/1:1,13:14:35.86:278,36,0	1/1:1,17:18:53.76:413,54,0	1/1:1,19:20:44.73:342,45,0	1/1:6,20:25:56.75:441,57,0
chr10	64945213	.	C	CT	902.89	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-6.023;DP=457;FS=6.298;HRun=4;HaplotypeScore=84.1115;InbreedingCoeff=0.7969;MQ=71.37;MQ0=3;MQRankSum=-1.772;QD=31.13;ReadPosRankSum=-3.556;VQSLOD=2.2343;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:21.03:0,21,225	0/0:8,0:8:24.05:0,24,261	0/0:22,0:15:22.94:0,23,296	0/0:27,0:16:3.91:0,4,147	0/0:19,0:19:48.10:0,48,529	0/0:20,0:20:54.14:0,54,598	0/0:5,0:5:12.02:0,12,129	1/1:4,25:29:76.12:998,76,0	0/0:12,0:12:36.10:0,36,405	0/0:14,0:14:42.08:0,42,462	0/0:15,0:15:42.12:0,42,475	0/0:9,0:9:24.07:0,24,266	0/0:10,0:10:21.04:0,21,229	0/0:8,0:8:12.03:0,12,136	0/0:11,0:11:21.06:0,21,238	0/0:9,0:9:23.66:0,24,247	0/0:21,0:20:41.91:0,42,431	0/0:14,0:12:32.82:0,33,374	0/0:14,0:14:39.10:0,39,434	0/0:21,0:21:63.16:0,63,700	0/0:7,0:7:15.03:0,15,156	0/0:10,0:10:27.08:0,27,306	0/0:24,0:24:69.17:0,69,763	0/0:17,0:17:42.12:0,42,476	0/0:21,0:21:36.10:0,36,408	0/0:17,0:16:48.13:0,48,542	0/0:23,0:21:51.13:0,51,567	0/0:27,0:27:63.11:0,63,701
chr10	64945238	.	C	CTT	2905.44	PASS	AB=0.930;AC=45;AF=0.804;AN=56;BaseQRankSum=2.574;DP=596;FS=0.000;HRun=15;HaplotypeScore=126.4273;InbreedingCoeff=0.5982;MQ=67.54;MQ0=19;MQRankSum=-2.326;QD=6.16;ReadPosRankSum=0.135;VQSLOD=0.7607;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:28:20.11:124,20,0	1/1:8,0:7:14.91:79,15,0	0/1:53,0:15:3.05:3,0,46	0/0:65,0:26:1.32:0,1,86	1/1:18,10:29:59.17:606,59,0	1/1:25,0:23:39.53:230,40,0	1/1:7,0:7:11.77:64,12,0	1/1:23,0:22:27.73:138,28,0	0/1:11,0:14:21.77:38,0,22	1/1:20,0:19:20.57:119,21,0	1/1:23,0:22:36.12:209,36,0	1/1:15,0:14:23.08:130,23,0	0/0:8,0:10:20.22:0,20,138	1/1:14,0:12:6.94:47,7,0	1/1:6,0:6:2.90:16,3,0	1/1:15,0:15:27.37:133,27,0	1/1:18,0:14:10.93:73,11,0	1/1:16,0:14:14.69:85,15,0	1/1:13,0:12:16.78:83,17,0	1/1:20,0:20:34.05:151,34,0	1/1:8,0:6:8.91:61,9,0	1/1:11,0:10:7.91:38,8,0	0/0:26,0:27:20.31:0,20,184	0/0:17,0:19:37.19:0,37,263	0/1:26,0:25:0.79:90,0,1	1/1:20,0:20:34.57:175,35,0	1/1:16,0:16:20.20:133,20,0	1/1:36,0:33:42.22:242,42,0
chr10	64947464	.	TAA	T	658.68	PASS	AB=1.000;AC=3;AF=0.056;AN=54;BaseQRankSum=-0.146;DP=206;FS=0.000;HRun=8;HaplotypeScore=53.7135;InbreedingCoeff=0.3640;MQ=67.30;MQ0=3;MQRankSum=1.879;QD=17.33;ReadPosRankSum=-1.894;VQSLOD=0.6403;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:4.87:0,5,311	0/0:3,0:3:9.03:0,9,123	0/0:3,0:3:0:0,0,0	0/1:11,0:7:30.68:31,0,89	0/0:4,0:4:12.04:0,12,186	0/0:15,0:15:33.06:0,33,425	0/0:5,0:5:12.02:0,12,175	1/1:8,19:24:60.18:732,60,0	0/0:9,0:9:21.07:0,21,350	0/0:8,0:8:21.05:0,21,267	0/0:1,0:1:3.01:0,3,50	0/0:9,0:9:24.07:0,24,305	0/0:9,0:9:21.03:0,21,319	0/0:1,0:1:3.01:0,3,35	0/0:4,0:4:12:0,12,143	0/0:4,0:4:12.03:0,12,176	0/0:15,0:15:33:0,33,431	0/0:6,0:5:6.02:0,6,101	0/0:7,0:7:15.05:0,15,247	0/0:4,0:4:12.04:0,12,143	0/0:3,0:3:3.01:0,3,50	./.	0/0:3,0:3:9.02:0,9,123	0/0:6,0:6:18.02:0,18,262	0/0:7,0:7:18.06:0,18,257	0/0:13,0:13:30.10:0,30,469	0/0:6,0:6:12.04:0,12,168	0/0:11,0:11:27.08:0,27,356
chr10	64947472	.	A	ATATTTATT	8559.16	PASS	AC=36;AF=0.750;AN=48;BaseQRankSum=-5.368;DP=215;FS=7.652;HRun=0;HaplotypeScore=46.2563;InbreedingCoeff=0.6990;MQ=53.74;MQ0=8;MQRankSum=-5.772;QD=56.68;ReadPosRankSum=0.934;VQSLOD=3.0510;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,6:13:15.05:615,15,0	1/1:1,2:3:6.02:252,6,0	./.	0/0:9,0:5:5.36:0,5,88	1/1:5,3:4:9.03:214,9,0	1/1:7,8:14:30.09:1072,30,0	./.	0/0:25,0:21:30.10:0,30,617	0/0:8,0:8:18.06:0,18,470	1/1:5,4:7:12.04:504,12,0	1/1:1,1:2:6.02:223,6,0	1/1:5,6:10:21.04:776,21,0	0/0:7,0:7:12.04:0,12,314	1/1:0,1:1:3.01:126,3,0	1/1:2,2:5:6.02:252,6,0	1/1:4,0:4:6.02:84,6,0	1/1:5,11:16:30.10:1214,30,0	1/1:6,0:4:3.01:84,3,0	1/1:4,3:6:12.04:273,12,0	1/1:3,4:4:12.04:504,12,0	./.	./.	0/0:2,0:2:3.01:0,3,79	0/0:5,0:5:6.02:0,6,157	1/1:4,5:8:15.05:562,15,0	1/1:8,4:12:18.06:687,18,0	1/1:6,3:9:6.02:239,6,0	1/1:4,9:11:20.94:881,21,0
chr10	64949101	.	ATC	A	763.13	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.339;DP=695;FS=1.721;HRun=0;HaplotypeScore=90.8083;InbreedingCoeff=0.9997;MQ=83.13;MQ0=0;MQRankSum=-2.577;QD=33.18;ReadPosRankSum=-3.395;VQSLOD=4.8614;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:50.98:0,51,950	0/0:11,0:11:33.11:0,33,597	0/0:36,0:34:90.25:0,90,1575	0/0:39,0:34:83.11:0,83,1470	0/0:22,0:22:63.20:0,63,1108	0/0:34,0:33:96.30:0,96,1689	0/0:27,0:27:75.24:0,75,1325	1/1:2,21:23:46.55:858,47,0	0/0:28,0:28:78.18:0,78,1296	0/0:18,0:18:51.15:0,51,876	0/0:14,0:14:42.14:0,42,769	0/0:25,0:25:75.24:0,75,1338	0/0:21,0:21:63.16:0,63,1060	0/0:21,0:21:57.15:0,57,937	0/0:27,0:27:72.19:0,72,1289	0/0:24,0:23:69.18:0,69,1194	0/0:20,0:20:51.65:0,52,935	0/0:16,0:16:42.08:0,42,684	0/0:21,0:21:57.19:0,57,997	0/0:27,0:27:72.22:0,72,1258	0/0:33,0:33:99:0,99,1741	0/0:21,0:21:60.14:0,60,977	0/0:23,0:23:66.21:0,66,1164	0/0:24,0:24:57.16:0,57,976	0/0:30,0:30:84.26:0,84,1477	0/0:41,0:41:99:0,123,2192	0/0:25,0:23:63.22:0,63,1151	0/0:18,0:18:51.17:0,51,935
chr10	64949568	.	C	CTA	2180.32	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-2.311;DP=684;FS=8.108;HRun=0;HaplotypeScore=79.7013;InbreedingCoeff=0.9631;MQ=79.94;MQ0=0;MQRankSum=-1.967;QD=48.45;ReadPosRankSum=-5.512;VQSLOD=2.6152;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:90.30:0,90,1323	0/0:10,0:10:30.09:0,30,423	0/0:17,0:17:11.10:0,11,512	0/0:16,0:16:38.47:0,38,571	0/0:22,0:22:57.18:0,57,821	0/0:24,0:24:72.21:0,72,1004	0/0:20,0:20:57.19:0,57,839	1/1:4,41:45:99:2275,123,0	0/0:29,0:29:87.29:0,87,1262	0/0:26,0:26:72.21:0,72,1008	0/0:29,0:29:84.26:0,84,1184	0/0:12,0:12:36.12:0,36,530	0/0:20,0:20:57.19:0,57,837	0/0:22,0:22:60.16:0,60,826	0/0:34,0:34:99:0,99,1458	0/0:18,0:18:54.17:0,54,775	0/0:16,0:16:45.15:0,45,662	0/0:22,0:22:60.19:0,60,863	0/0:20,0:20:60.19:0,60,863	0/0:30,0:30:90.30:0,90,1305	0/0:33,0:33:96.32:0,96,1413	0/0:28,0:28:81.26:0,81,1171	0/0:26,0:26:75.23:0,75,1065	0/0:14,0:13:39.13:0,39,574	0/0:30,0:30:90.28:0,90,1304	0/0:37,0:37:99:0,105,1529	0/0:32,0:32:96.26:0,96,1317	0/0:20,0:19:54.18:0,54,791
chr10	64950190	.	T	TGGGGCGGGGTA	1650.67	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-0.667;DP=607;FS=8.841;HRun=0;HaplotypeScore=195.1547;InbreedingCoeff=0.9943;MQ=81.64;MQ0=0;MQRankSum=-3.411;QD=103.17;ReadPosRankSum=-3.355;VQSLOD=2.0939;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,101,3483	0/0:7,0:7:21.07:0,21,622	0/0:22,0:22:57.19:0,57,1777	0/0:30,0:30:74.25:0,74,2086	0/0:17,0:17:45.14:0,45,1491	0/0:16,0:16:42.14:0,42,1395	0/0:27,0:27:68.75:0,69,1947	1/1:3,4:16:45.05:1746,45,0	0/0:27,0:27:75.26:0,75,2507	0/0:28,0:28:81.27:0,81,2276	0/0:15,0:15:42.13:0,42,1313	0/0:28,0:28:69.19:0,69,1938	0/0:25,0:25:75.26:0,75,2530	0/0:14,0:14:30.10:0,30,1048	0/0:24,0:24:69.24:0,69,2260	0/0:21,0:21:60.16:0,60,1710	0/0:25,0:25:72.23:0,72,2291	0/0:14,0:14:39.09:0,39,1278	0/0:18,0:18:51.05:0,51,1321	0/0:12,0:12:33.08:0,33,991	0/0:55,0:55:99:0,150,4958	0/0:18,0:18:45.15:0,45,1534	0/0:11,0:11:30.10:0,30,981	0/0:26,0:26:72.25:0,72,2474	0/0:15,0:15:42.13:0,42,1343	0/0:25,0:25:57.19:0,57,1866	0/0:19,0:18:57.20:0,57,1737	0/0:12,0:12:33.11:0,33,1026
chr10	64950419	.	A	AACACACAC	15424.64	PASS	AB=0.821;AC=40;AF=0.714;AN=56;BaseQRankSum=-4.391;DP=632;FS=0.463;HRun=0;HaplotypeScore=172.4475;InbreedingCoeff=0.7748;MQ=63.26;MQ0=8;MQRankSum=-10.168;QD=37.17;ReadPosRankSum=-1.187;VQSLOD=4.1058;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:49:60.21:0,60,1111	1/1:7,0:11:9.02:190,9,0	0/0:36,0:25:26.57:0,27,453	0/0:30,0:22:15.05:0,15,374	1/1:8,0:13:6.02:158,6,0	1/1:11,8:19:24.08:940,24,0	1/1:8,7:17:21.54:736,22,0	0/0:23,0:23:35.96:0,36,538	0/1:25,0:25:37.73:38,0,980	1/1:23,10:37:61.41:1797,61,0	1/1:5,2:9:6.02:248,6,0	1/1:15,3:20:27.09:877,27,0	0/0:14,0:17:32.99:0,33,800	1/1:8,3:14:21.06:657,21,0	1/1:15,13:30:45.15:1781,45,0	1/1:10,12:24:54.17:1965,54,0	1/1:15,4:20:17.20:598,17,0	1/1:19,0:19:12.03:355,12,0	1/1:15,1:16:9.03:303,9,0	1/1:8,3:14:15.04:507,15,0	1/1:15,2:25:24.05:621,24,0	1/1:14,6:23:15.05:598,15,0	0/0:21,0:23:42.13:0,42,950	0/0:36,0:36:21.24:0,21,1472	1/1:10,8:21:12.04:492,12,0	1/1:13,7:23:39.12:1275,39,0	1/1:8,8:18:30.57:1146,31,0	0/1:4,0:9:4.53:141,0,5
chr10	64950443	.	CA	C	620.71	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.268;DP=650;FS=0.000;HRun=1;HaplotypeScore=130.0943;InbreedingCoeff=0.9647;MQ=54.86;MQ0=15;MQRankSum=-0.646;QD=25.86;ReadPosRankSum=-0.482;VQSLOD=3.2669;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:31.56:0,32,422	0/0:10,0:9:14.05:0,14,137	0/0:39,0:22:64.86:0,65,730	0/0:37,0:26:62.49:0,62,801	0/0:18,0:18:27.07:0,27,303	0/0:19,0:19:39.05:0,39,390	0/0:19,0:19:40.23:0,40,433	1/1:1,23:19:54.15:716,54,0	0/0:27,0:27:68.20:0,68,894	0/0:35,0:35:93.28:0,93,994	0/0:12,0:12:19.87:0,20,191	0/0:17,0:17:35.90:0,36,341	0/0:19,0:19:47.18:0,47,648	0/0:15,0:15:30.01:0,30,280	0/0:26,0:26:53.13:0,53,479	0/0:30,0:29:72.06:0,72,691	0/0:29,0:29:52.19:0,52,550	0/0:20,0:19:53.29:0,53,494	0/0:15,0:14:39.02:0,39,420	0/0:16,0:16:27.02:0,27,268	0/0:30,0:29:22.98:0,23,339	0/0:18,0:18:27.06:0,27,294	0/0:15,0:15:38.21:0,38,548	0/0:33,0:33:83.64:0,84,1158	0/0:19,0:18:30.06:0,30,313	0/0:25,0:24:62.38:0,62,656	0/0:21,0:20:48.07:0,48,508	0/0:13,0:13:21.02:0,21,211
chr10	64951764	.	A	AT	781.89	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-7.372;DP=587;FS=5.005;HRun=7;HaplotypeScore=55.0917;InbreedingCoeff=0.9321;MQ=74.23;MQ0=0;MQRankSum=-0.229;QD=25.22;ReadPosRankSum=-5.826;VQSLOD=1.2655;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:72.11:0,72,695	0/0:12,0:12:36.06:0,36,348	0/0:13,0:13:16.81:0,17,139	0/0:12,0:12:12.23:0,12,134	0/0:32,0:32:93.15:0,93,898	0/0:20,0:19:57.09:0,57,550	0/0:21,0:21:45.06:0,45,435	1/1:5,26:31:75.18:877,75,0	0/0:16,0:16:42.06:0,42,405	0/0:29,0:29:78.12:0,78,753	0/0:22,0:22:60.09:0,60,579	0/0:9,0:9:27.03:0,27,255	0/0:11,0:11:33.05:0,33,318	0/0:17,0:17:48.08:0,48,463	0/0:17,0:17:42.04:0,42,399	0/0:20,0:20:54.08:0,54,521	0/0:28,0:27:75.09:0,75,717	0/0:23,0:23:63.10:0,63,608	0/0:24,0:24:63.07:0,63,597	0/0:37,0:37:99:0,102,985	0/0:4,0:4:12.02:0,12,116	0/0:22,0:22:54.08:0,54,521	0/0:27,0:27:75.10:0,75,718	0/0:16,0:16:36.04:0,36,341	0/0:37,0:37:96.15:0,96,927	0/0:28,0:28:81.11:0,81,776	0/0:21,0:21:54.08:0,54,521	0/0:12,0:12:33.05:0,33,319
chr10	64951874	.	CTGAGTTCAAATCCCAG	C	2245.74	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.583;DP=573;FS=1.810;HRun=0;HaplotypeScore=239.8029;InbreedingCoeff=0.8792;MQ=85.93;MQ0=0;MQRankSum=-3.002;QD=102.08;ReadPosRankSum=-2.811;VQSLOD=2.7029;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:96.33:0,96,7511	0/0:4,0:4:12.04:0,12,578	0/0:25,0:25:75.24:0,75,3607	0/0:21,0:21:63.22:0,63,4238	0/0:19,0:19:57.20:0,57,3985	0/0:22,0:22:66.21:0,66,4301	0/0:19,0:19:57.20:0,57,4544	1/1:0,22:22:63.17:2341,63,0	0/0:9,0:9:27.09:0,27,1991	0/0:24,0:24:69.24:0,69,5474	0/0:12,0:12:33.11:0,33,2499	0/0:19,0:19:57.20:0,57,4277	0/0:22,0:22:66.23:0,66,4804	0/0:19,0:19:57.20:0,57,4333	0/0:24,0:24:72.25:0,72,5049	0/0:27,0:27:81.28:0,81,6492	0/0:26,0:26:78.27:0,78,6115	0/0:23,0:23:69.24:0,69,4937	0/0:23,0:23:69.24:0,69,4106	0/0:29,0:29:87.28:0,87,6308	0/0:26,0:26:78.25:0,78,5879	0/0:16,0:16:48.16:0,48,3876	0/0:26,0:26:78.27:0,78,5759	0/0:24,0:24:72.25:0,72,5296	0/0:10,0:10:30.10:0,30,2246	0/0:26,0:26:78.27:0,78,5832	0/0:22,0:22:63.20:0,63,4339	0/0:2,0:2:6.02:0,6,485
chr10	64952323	.	CT	C	641.20	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.614;DP=528;FS=9.769;HRun=1;HaplotypeScore=55.5177;InbreedingCoeff=0.9625;MQ=86.64;MQ0=0;MQRankSum=-1.984;QD=32.06;ReadPosRankSum=-3.128;VQSLOD=1.4514;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,102,1478	0/0:7,0:7:21.05:0,21,293	0/0:23,0:23:53.25:0,53,614	0/0:13,1:14:12.92:0,13,209	0/0:24,0:24:72.19:0,72,996	0/0:23,0:23:69.22:0,69,1013	0/0:21,0:21:63.20:0,63,923	1/1:1,19:20:54.18:736,54,0	0/0:20,0:20:60.16:0,60,837	0/0:23,0:23:66.22:0,66,972	0/0:19,0:19:57.13:0,57,766	0/0:18,0:18:54.15:0,54,766	0/0:18,0:18:54.17:0,54,788	0/0:20,0:20:60.19:0,60,875	0/0:18,0:18:54.16:0,54,768	0/0:18,0:18:54.17:0,54,785	0/0:10,0:10:30.06:0,30,406	0/0:17,0:17:48.11:0,48,672	0/0:24,0:24:72.23:0,72,1043	0/0:24,0:24:72.20:0,72,1013	0/0:20,0:20:60.11:0,60,777	0/0:18,0:18:54.17:0,54,787	0/0:13,0:13:39.11:0,39,562	0/0:14,0:14:42.14:0,42,627	0/0:9,0:9:27.09:0,27,404	0/0:30,0:30:87.25:0,87,1213	0/0:23,0:23:69.22:0,69,1011	0/0:6,0:6:18.06:0,18,269
chr10	64953824	.	CACAA	C	1147.23	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.971;DP=632;FS=21.042;HRun=0;HaplotypeScore=102.9760;InbreedingCoeff=0.9986;MQ=83.97;MQ0=0;MQRankSum=-6.272;QD=42.49;ReadPosRankSum=-2.588;VQSLOD=1.9683;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,117,3136	0/0:9,0:9:27.09:0,27,735	0/0:25,0:25:72.22:0,72,1818	0/0:16,0:16:48.13:0,48,1099	0/0:28,0:28:84.29:0,84,2345	0/0:18,0:18:51.15:0,51,1363	0/0:22,0:22:66.23:0,66,1814	1/1:4,23:27:66.19:1242,66,0	0/0:23,0:23:69.22:0,69,1832	0/0:31,0:31:93.32:0,93,2556	0/0:13,0:13:39.13:0,39,1071	0/0:22,0:22:66.23:0,66,1817	0/0:13,0:13:39.13:0,39,1087	0/0:23,0:23:69.24:0,69,1860	0/0:20,0:20:60.16:0,60,1538	0/0:30,0:30:87.30:0,87,2412	0/0:21,0:21:63.22:0,63,1719	0/0:11,0:11:33.11:0,33,923	0/0:18,0:18:51.17:0,51,1409	0/0:21,0:21:60.19:0,60,1556	0/0:33,0:33:99:0,99,2766	0/0:24,0:24:72.25:0,72,1984	0/0:27,0:27:81.28:0,81,2230	0/0:27,0:27:78.27:0,78,2183	0/0:18,0:18:54.19:0,54,1497	0/0:29,0:28:84.29:0,84,2283	0/0:24,0:24:66.23:0,66,1844	0/0:19,0:19:57.20:0,57,1590
chr10	64954008	.	T	TACACACACACACAC	6223.58	PASS	AB=1.000;AC=39;AF=0.696;AN=56;BaseQRankSum=0.386;DP=811;FS=26.353;HRun=0;HaplotypeScore=295.7579;InbreedingCoeff=0.6332;MQ=47.70;MQ0=28;MQRankSum=-4.698;QD=12.62;ReadPosRankSum=-5.791;VQSLOD=1.4595;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:32,0:29:14.73:315,15,0	1/1:6,5:15:2.99:151,3,0	0/0:67,0:13:6.11:0,6,79	0/0:62,0:21:2.15:0,2,67	1/1:26,0:26:6.49:133,6,0	0/1:29,0:29:58.93:298,0,59	1/1:32,0:31:22.65:451,23,0	0/0:22,0:34:41.96:0,42,1011	0/0:34,0:36:84.94:0,85,3051	1/1:40,0:39:43.39:1064,43,0	1/1:12,0:11:6.01:71,6,0	0/0:16,14:38:0.65:0,1,5	0/0:25,0:25:57.19:0,57,1936	1/1:11,7:24:3.01:151,3,0	1/1:27,2:30:14.83:347,15,0	1/1:13,7:26:8.62:340,9,0	1/1:10,2:15:5.69:213,6,0	1/1:22,0:21:20.96:413,21,0	1/1:14,0:13:15.04:393,15,0	1/1:17,1:17:9.36:278,9,0	1/1:44,0:44:8.28:184,8,0	1/1:24,0:24:11.79:180,12,0	0/0:18,0:21:38.12:0,38,924	0/0:33,0:34:39.77:0,40,2554	1/1:14,3:25:3.03:117,3,0	1/1:25,0:25:30.10:803,30,0	1/1:21,3:28:3.48:71,3,0	1/1:9,0:9:9.03:249,9,0
chr10	64954230	.	AAAAAAC	A	1190.96	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.658;DP=597;FS=8.290;HRun=0;HaplotypeScore=123.8510;InbreedingCoeff=0.9293;MQ=68.16;MQ0=0;MQRankSum=-4.367;QD=49.62;ReadPosRankSum=-3.575;VQSLOD=2.6172;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:93.28:0,93,3064	0/0:10,0:10:30.10:0,30,1016	0/0:21,0:19:18.72:0,19,906	0/0:6,0:5:9.03:0,9,227	0/0:34,0:34:99:0,99,3283	0/0:32,0:32:87.26:0,87,2849	0/0:14,0:14:42.14:0,42,1418	1/1:1,23:24:69.06:1286,69,0	0/0:25,0:25:66.21:0,66,2080	0/0:34,0:34:90.31:0,90,2908	0/0:17,0:17:48.16:0,48,1624	0/0:21,0:21:51.13:0,51,1636	0/0:23,0:23:66.21:0,66,2024	0/0:11,0:11:33.10:0,33,1036	0/0:26,0:26:63.21:0,63,2058	0/0:15,0:15:33.08:0,33,1035	0/0:23,0:23:63.22:0,63,2131	0/0:22,0:22:57.18:0,57,1851	0/0:17,0:17:45.15:0,45,1521	0/0:21,0:21:54.19:0,54,1826	0/0:8,0:8:18.06:0,18,609	0/0:24,0:24:69.22:0,69,2081	0/0:25,0:25:69.24:0,69,2334	0/0:9,0:9:24.08:0,24,812	0/0:35,0:35:99:0,102,3306	0/0:28,0:28:75.20:0,75,2366	0/0:22,0:22:54.19:0,54,1799	0/0:14,0:14:42.14:0,42,1421
chr10	64956461	.	AG	A	1058.15	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.212;DP=665;FS=0.000;HRun=2;HaplotypeScore=64.5648;InbreedingCoeff=0.9978;MQ=92.09;MQ0=0;MQRankSum=-2.496;QD=34.13;ReadPosRankSum=-3.191;VQSLOD=2.5572;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:81.27:0,81,1212	0/0:8,0:8:24.08:0,24,360	0/0:29,0:29:84.26:0,84,1202	0/0:25,0:25:69.04:0,69,901	0/0:18,0:18:54.18:0,54,807	0/0:21,0:21:63.19:0,63,903	0/0:28,0:28:84.27:0,84,1239	1/1:0,31:31:90.28:1153,90,0	0/0:28,0:28:84.28:0,84,1255	0/0:26,0:26:78.26:0,78,1152	0/0:20,0:20:57.19:0,57,854	0/0:25,0:25:75.25:0,75,1123	0/0:25,0:25:75.23:0,75,1082	0/0:25,0:25:75.25:0,75,1121	0/0:33,0:33:99:0,99,1464	0/0:13,0:12:39.13:0,39,581	0/0:25,0:25:72.23:0,72,1055	0/0:21,0:21:63.21:0,63,942	0/0:26,0:26:75.24:0,75,1103	0/0:22,0:22:66.21:0,66,960	0/0:48,0:48:99:0,141,2065	0/0:18,0:18:54.18:0,54,792	0/0:16,0:16:48.13:0,48,679	0/0:35,0:35:99:0,105,1528	0/0:14,0:14:42.13:0,42,608	0/0:22,0:22:66.20:0,66,939	0/0:22,0:22:63.20:0,63,917	0/0:12,0:12:36.11:0,36,520
chr10	64957131	.	G	GAAAA	7533.36	PASS	AB=1.000;AC=44;AF=0.786;AN=56;BaseQRankSum=-0.210;DP=701;FS=10.831;HRun=10;HaplotypeScore=110.7892;InbreedingCoeff=0.7107;MQ=54.75;MQ0=26;MQRankSum=-4.186;QD=13.10;ReadPosRankSum=-4.548;VQSLOD=-0.0487;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:40:87.15:0,87,1126	1/1:0,8:8:5.89:86,6,0	0/1:47,0:14:9.13:9,0,76	0/1:29,0:9:8.14:8,0,31	1/1:9,0:47:53.27:748,53,0	1/1:16,4:19:38.07:517,38,0	1/1:5,18:24:18.06:357,18,0	1/1:23,0:29:40.65:340,41,0	0/0:20,0:18:39.05:0,39,505	1/1:8,13:23:38.38:515,38,0	1/1:5,22:33:44.91:660,45,0	1/1:5,13:19:17.40:373,17,0	0/0:15,0:15:26.81:0,27,298	1/1:6,8:14:2.60:69,3,0	1/1:2,19:22:9.03:198,9,0	1/1:3,17:20:9.03:168,9,0	1/1:9,19:29:20.94:398,21,0	1/1:7,13:23:19.49:334,19,0	1/1:26,0:20:38.91:399,39,0	1/1:13,14:30:12.44:322,12,0	1/1:6,0:6:0.47:1,0,0	1/1:7,12:19:29.89:433,30,0	0/0:22,0:25:55.50:0,56,684	0/0:26,0:26:56.48:0,56,677	1/1:3,18:23:17.91:288,18,0	1/1:6,21:27:59.23:699,59,0	1/1:23,1:26:39.83:359,40,0	1/1:3,15:18:12.51:252,13,0
chr10	64957142	.	GA	G	569	PASS	AB=0.974;AC=4;AF=0.071;AN=56;BaseQRankSum=-1.421;DP=678;FS=27.023;HRun=10;HaplotypeScore=98.0526;InbreedingCoeff=0.4042;MQ=59.65;MQ0=20;MQRankSum=1.258;QD=4.70;ReadPosRankSum=4.196;VQSLOD=0.1154;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,34:39:74.98:651,75,0	0/0:10,0:9:9.02:0,9,96	0/1:53,1:18:13.38:13,0,125	0/0:36,0:12:12.13:0,12,87	0/0:44,0:45:99:0,105,1052	0/0:18,0:17:29.94:0,30,387	0/0:21,0:21:30.02:0,30,300	0/0:33,0:32:49.77:0,50,256	0/0:24,0:22:48.08:0,48,497	0/0:21,0:21:48.13:0,48,524	0/0:26,0:26:48.12:0,48,521	0/0:21,0:20:1.65:0,2,235	0/0:13,0:13:36.10:0,36,398	0/0:9,0:9:8.94:0,9,83	0/0:22,0:22:14.61:0,15,126	0/0:26,0:25:25.62:0,26,269	0/1:27,1:27:16.97:17,0,168	0/0:22,0:24:38.72:0,39,369	0/0:23,0:20:30.89:0,31,505	0/0:25,0:24:42.99:0,43,451	0/0:3,0:3:0:0,0,0	0/0:14,0:14:30.08:0,30,327	0/0:24,0:24:60.15:0,60,653	0/0:25,1:26:37.13:0,37,638	0/0:23,0:23:23.65:0,24,225	0/0:28,0:27:49.73:0,50,461	0/0:21,0:21:44.98:0,45,441	0/0:19,1:20:16.21:0,16,386
chr10	64957152	.	A	AAG	932.51	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=0.820;DP=649;FS=7.831;HRun=0;HaplotypeScore=104.1677;InbreedingCoeff=0.8599;MQ=66.71;MQ0=16;MQRankSum=-2.972;QD=28.26;ReadPosRankSum=-5.106;VQSLOD=3.4856;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:86.68:0,87,664	0/0:10,0:9:17.92:0,18,174	0/0:54,0:20:20.35:0,20,252	0/0:36,0:15:8.85:0,9,123	0/0:46,0:46:99:0,103,1133	0/0:14,0:13:12.67:0,13,367	0/0:17,0:17:32.85:0,33,306	1/1:3,26:32:81.45:1027,81,0	0/0:23,0:21:54.09:0,54,649	0/0:22,0:22:66.15:0,66,802	0/0:27,0:27:59.77:0,60,618	0/0:22,0:21:44.73:0,45,456	0/0:14,0:14:42.12:0,42,552	0/0:8,0:8:11.52:0,12,133	0/0:19,0:19:21.38:0,21,187	0/0:23,0:22:14.69:0,15,351	0/0:24,0:23:30.92:0,31,249	0/0:19,0:19:28.86:0,29,351	0/0:23,0:22:62.73:0,63,692	0/0:23,0:23:53.96:0,54,582	0/0:9,0:9:20.92:0,21,163	0/0:12,0:12:33.01:0,33,393	0/0:21,0:21:60.19:0,60,817	0/0:25,0:25:69.14:0,69,909	0/0:24,0:24:29.68:0,30,327	0/0:21,0:21:34.56:0,35,461	0/0:14,0:14:39.06:0,39,442	0/0:25,0:24:49.62:0,50,567
chr10	64957338	.	AAGTAAGAGAGAAAC	A	1720.99	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.668;DP=688;FS=0.811;HRun=0;HaplotypeScore=258.0943;InbreedingCoeff=0.9986;MQ=71.98;MQ0=0;MQRankSum=-4.662;QD=57.37;ReadPosRankSum=-3.059;VQSLOD=2.7489;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,111,7048	0/0:12,0:12:27.09:0,27,1687	0/0:13,0:13:36.12:0,36,1920	0/0:27,0:27:75.76:0,76,3985	0/0:25,0:25:66.23:0,66,4468	0/0:15,0:15:42.14:0,42,2789	0/0:25,0:25:66.21:0,66,4146	1/1:8,22:30:66.01:1816,66,0	0/0:25,0:24:69.24:0,69,4341	0/0:25,0:25:72.24:0,72,4722	0/0:16,0:16:45.15:0,45,2891	0/0:28,0:28:75.24:0,75,4856	0/0:22,0:22:63.22:0,63,4022	0/0:24,0:24:72.25:0,72,4572	0/0:36,0:36:99:0,105,6809	0/0:27,0:27:78.23:0,78,4927	0/0:28,0:28:75.24:0,75,4317	0/0:23,0:23:63.20:0,63,4059	0/0:22,0:22:57.20:0,57,3450	0/0:21,0:21:63.22:0,63,3991	0/0:34,0:34:99:0,102,6510	0/0:14,0:14:42.14:0,42,2609	0/0:14,0:14:36.12:0,36,2479	0/0:42,0:42:99:0,117,7197	0/0:24,0:24:72.25:0,72,4965	0/0:26,0:26:78.22:0,78,4837	0/0:38,0:37:99:0,108,6970	0/0:15,0:15:42.14:0,42,2837
chr10	64957768	.	CG	C	477.31	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=1.515;DP=606;FS=0.000;HRun=2;HaplotypeScore=94.1079;InbreedingCoeff=0.9830;MQ=83.17;MQ0=0;MQRankSum=-0.359;QD=29.83;ReadPosRankSum=-3.320;VQSLOD=2.4021;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,141,2000	0/0:5,0:5:15.05:0,15,224	0/0:14,0:14:39.06:0,39,535	0/0:23,0:22:53.36:0,53,822	0/0:18,0:18:54.17:0,54,787	0/0:22,0:22:66.20:0,66,945	0/0:36,0:35:99:0,105,1527	1/1:0,16:16:48.06:572,48,0	0/0:14,0:14:42.14:0,42,612	0/0:14,0:14:42.14:0,42,611	0/0:15,0:15:42.13:0,42,607	0/0:34,0:34:99:0,102,1504	0/0:26,0:26:78.25:0,78,1146	0/0:31,0:31:90.30:0,90,1338	0/0:21,0:21:63.19:0,63,904	0/0:16,0:16:48.10:0,48,655	0/0:29,0:29:87.28:0,87,1283	0/0:33,0:33:96.32:0,96,1426	0/0:21,0:21:54.18:0,54,789	0/0:15,0:15:39.13:0,39,581	0/0:39,0:39:99:0,111,1572	0/0:11,0:11:33.11:0,33,490	0/0:12,0:12:29.97:0,30,417	0/0:32,0:32:93.31:0,93,1385	0/0:16,0:16:48.16:0,48,714	0/0:17,0:17:48.16:0,48,718	0/0:18,0:18:54.13:0,54,781	0/0:10,0:10:30.08:0,30,428
chr10	64960164	.	C	CT	941.44	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=1.605;DP=769;FS=6.612;HRun=1;HaplotypeScore=115.5998;InbreedingCoeff=0.9993;MQ=87.58;MQ0=0;MQRankSum=0.172;QD=37.66;ReadPosRankSum=-4.487;VQSLOD=1.6184;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:46:99:0,141,1830	0/0:17,0:17:51.15:0,51,647	0/0:31,0:31:80.64:0,81,964	0/0:22,0:22:52.91:0,53,702	0/0:22,0:22:60.18:0,60,763	0/0:20,0:20:54.16:0,54,686	0/0:34,0:34:96.31:0,96,1241	1/1:2,23:25:72.23:1036,72,0	0/0:32,0:32:96.31:0,96,1247	0/0:30,0:30:84.27:0,84,1084	0/0:13,0:13:36.12:0,36,467	0/0:40,0:40:99:0,120,1544	0/0:27,0:26:78.24:0,78,997	0/0:26,0:26:69.17:0,69,862	0/0:24,0:24:69.21:0,69,879	0/0:25,0:25:75.24:0,75,972	0/0:49,0:49:99:0,144,1853	0/0:20,0:20:57.18:0,57,739	0/0:11,0:11:33.09:0,33,412	0/0:12,0:12:36.12:0,36,467	0/0:86,0:86:99:0,253,3225	0/0:15,0:15:36.12:0,36,467	0/0:18,0:18:54.16:0,54,685	0/0:34,0:34:99:0,99,1265	0/0:19,0:19:54.18:0,54,701	0/0:34,0:34:96.31:0,96,1245	0/0:20,0:19:57.19:0,57,740	0/0:16,0:16:45.14:0,45,573
chr10	64960413	.	AT	A	970.54	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.926;DP=741;FS=0.000;HRun=3;HaplotypeScore=76.1753;InbreedingCoeff=0.9953;MQ=90.59;MQ0=0;MQRankSum=-0.595;QD=32.35;ReadPosRankSum=-5.324;VQSLOD=1.3721;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,133,1851	0/0:8,0:8:21.06:0,21,284	0/0:22,0:22:60.16:0,60,819	0/0:36,0:36:97.31:0,97,1349	0/0:23,0:23:63.21:0,63,902	0/0:18,0:18:48.16:0,48,688	0/0:28,0:28:84.24:0,84,1170	1/1:0,30:30:87.26:1065,87,0	0/0:33,0:33:93.31:0,93,1334	0/0:30,0:30:90.30:0,90,1295	0/0:10,0:10:30.10:0,30,432	0/0:24,0:24:72.24:0,72,1033	0/0:27,0:27:81.27:0,81,1165	0/0:20,0:20:60.20:0,60,864	0/0:26,0:25:78.26:0,78,1119	0/0:15,0:15:45.15:0,45,644	0/0:49,0:49:99:0,147,2114	0/0:32,0:32:93.31:0,93,1339	0/0:22,0:22:63.21:0,63,905	0/0:25,0:25:75.25:0,75,1080	0/0:65,0:65:99:0,190,2677	0/0:27,0:27:81.22:0,81,1125	0/0:15,0:15:45.14:0,45,630	0/0:29,0:29:87.29:0,87,1253	0/0:13,0:13:39.13:0,39,561	0/0:26,0:26:75.25:0,75,1080	0/0:28,0:28:81.27:0,81,1166	0/0:14,0:14:39.13:0,39,562
chr10	64960665	.	CCTG	C	365.85	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=4.606;DP=518;FS=5.625;HRun=0;HaplotypeScore=73.7602;InbreedingCoeff=0.5477;MQ=75.88;MQ0=0;MQRankSum=-0.698;QD=10.45;ReadPosRankSum=-1.152;VQSLOD=1.9357;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:51.17:0,51,1012	0/0:9,0:9:15.02:0,15,257	0/0:15,0:14:26.91:0,27,421	0/0:18,0:17:29.86:0,30,450	0/0:10,0:10:6.02:0,6,101	0/0:9,0:9:18.03:0,18,272	0/0:28,0:28:75.25:0,75,1483	1/1:9,13:22:35.91:451,36,0	0/0:28,0:28:63.17:0,63,1178	0/0:8,0:8:18.05:0,18,298	0/0:14,0:14:21.06:0,21,360	0/0:35,0:35:90.31:0,90,1863	0/0:29,0:29:75.26:0,75,1515	0/0:22,0:22:60.21:0,60,1208	0/0:18,0:18:54.16:0,54,1067	0/0:17,0:17:36.11:0,36,680	0/0:37,0:37:96.31:0,96,1981	0/0:26,1:27:26.62:0,27,1285	0/0:11,0:11:21.06:0,21,362	0/1:13,0:13:19.75:20,0,379	0/0:31,1:32:35.66:0,36,1477	0/0:7,0:7:8.70:0,9,125	0/0:10,0:10:24:0,24,411	0/0:29,0:29:72.25:0,72,1517	0/0:10,0:10:18.05:0,18,325	0/0:16,0:16:24.08:0,24,499	0/0:17,0:17:42.14:0,42,848	0/0:4,0:4:12.04:0,12,235
chr10	64960721	.	GTTC	G	733.37	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.725;DP=628;FS=1.740;HRun=0;HaplotypeScore=86.9009;InbreedingCoeff=0.9677;MQ=68.09;MQ0=1;MQRankSum=-2.108;QD=29.33;ReadPosRankSum=-3.353;VQSLOD=3.1604;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,105,2003	0/0:9,0:9:27.07:0,27,497	0/0:15,0:14:27.08:0,27,470	0/0:32,0:29:59.04:0,59,999	0/0:20,0:20:50.88:0,51,888	0/0:16,0:16:42.11:0,42,852	0/0:31,0:31:81.18:0,81,1406	1/1:4,20:25:63.12:828,63,0	0/0:28,0:28:75.15:0,75,1509	0/0:19,0:19:54.16:0,54,1030	0/0:12,0:12:29.84:0,30,415	0/0:31,0:31:78.17:0,78,1476	0/0:26,0:26:69.04:0,69,1233	0/0:26,0:26:75.22:0,75,1388	0/0:23,0:23:57.15:0,57,1060	0/0:20,0:20:60.17:0,60,1200	0/0:37,0:37:99:0,99,1865	0/0:25,0:24:75.21:0,75,1453	0/0:21,0:21:54.08:0,54,795	0/0:17,0:17:42.13:0,42,841	0/0:40,0:40:99:0,108,2142	0/0:16,0:16:45.14:0,45,921	0/0:18,0:18:45.14:0,45,834	0/0:30,0:30:72.18:0,72,1424	0/0:14,0:14:42.14:0,42,895	0/0:22,0:22:59.40:0,59,1127	0/0:15,0:15:39.13:0,39,778	0/0:4,0:4:12.04:0,12,256
chr10	64960945	.	GT	G	5005.25	PASS	AB=0.605;AC=39;AF=0.696;AN=56;BaseQRankSum=1.158;DP=530;FS=0.565;HRun=14;HaplotypeScore=63.3924;InbreedingCoeff=0.4842;MQ=69.31;MQ0=5;MQRankSum=-0.844;QD=11.95;ReadPosRankSum=2.846;VQSLOD=4.8837;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,36:46:56.50:515,56,0	1/1:1,8:9:23.75:161,24,0	0/0:37,1:18:5.10:0,5,117	0/0:30,0:14:1.82:0,2,80	1/1:11,17:29:64.26:427,64,0	1/1:4,15:20:34.71:232,35,0	0/1:4,5:11:8.87:75,0,9	1/1:6,0:19:26.46:77,26,0	0/0:13,1:14:9.46:0,9,230	1/1:3,12:16:37.73:252,38,0	1/1:4,25:29:36.97:382,37,0	1/1:1,6:7:8.56:61,9,0	0/0:9,0:11:20.67:0,21,160	1/1:8,10:18:9.01:182,9,0	0/1:6,9:15:4.34:102,0,4	0/1:3,10:13:1.07:138,0,1	1/1:3,23:27:2.86:296,3,0	1/1:3,19:23:46.66:314,47,0	1/1:5,13:19:24.35:252,24,0	1/1:2,12:16:33.13:202,33,0	1/1:5,4:9:8.89:62,9,0	0/1:5,4:8:16.02:47,0,16	0/0:11,0:11:26.70:0,27,230	0/0:7,0:6:9.01:0,9,84	1/1:6,22:28:59.45:411,59,0	1/1:5,29:35:85.01:568,85,0	1/1:4,9:13:1.73:147,2,0	0/1:1,7:8:7:102,0,7
chr10	64960984	.	TCCA	T	640.80	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.218;DP=465;FS=19.319;HRun=0;HaplotypeScore=74.3020;InbreedingCoeff=0.7485;MQ=51.11;MQ0=14;MQRankSum=-3.720;QD=26.70;ReadPosRankSum=-1.236;VQSLOD=1.7516;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:40:87.15:0,87,2022	0/0:14,0:13:23.95:0,24,522	0/0:10,0:1:3.01:0,3,71	0/0:12,0:3:9.03:0,9,213	1/1:5,19:23:42.14:735,42,0	0/0:20,0:20:42.10:0,42,942	0/0:9,0:6:18.06:0,18,394	0/0:18,0:16:48.16:0,48,858	0/0:10,0:10:21.07:0,21,496	0/0:12,0:12:29.95:0,30,709	0/0:24,0:24:48.12:0,48,1068	0/0:12,0:12:24.08:0,24,566	0/0:14,0:14:30.03:0,30,565	0/0:12,0:12:30.10:0,30,701	0/0:12,0:12:27.09:0,27,638	0/0:11,0:11:27.09:0,27,638	0/0:24,0:21:54.19:0,54,1276	0/0:28,0:25:54.19:0,54,1272	0/0:19,0:15:42.14:0,42,993	0/0:21,0:21:60.21:0,60,1406	0/0:9,0:5:9.03:0,9,213	0/0:9,0:9:15.05:0,15,353	0/0:15,0:15:33.11:0,33,780	0/0:11,0:11:24.07:0,24,520	0/0:21,0:21:51.18:0,51,1205	0/0:27,0:27:78.25:0,78,1756	0/0:14,0:14:39.08:0,39,830	0/0:12,0:10:27.09:0,27,637
chr10	64961027	.	TC	T	799.82	PASS	AC=2;AF=0.038;AN=52;BaseQRankSum=6.055;DP=522;FS=3.030;HRun=1;HaplotypeScore=78.7708;InbreedingCoeff=0.9637;MQ=38.91;MQ0=55;MQRankSum=-6.335;QD=27.58;ReadPosRankSum=-2.747;VQSLOD=2.8087;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:41:74.78:0,75,1196	0/0:12,0:11:21.07:0,21,335	./.	./.	0/0:23,0:22:36.12:0,36,573	0/0:19,0:15:27.09:0,27,431	0/0:12,0:7:18.06:0,18,287	1/1:2,27:26:69.22:894,69,0	0/0:15,0:14:33.11:0,33,526	0/0:15,0:15:36.03:0,36,573	0/0:20,0:20:39.12:0,39,598	0/0:14,0:12:24.08:0,24,383	0/0:11,0:11:21.07:0,21,335	0/0:17,0:15:36.12:0,36,574	0/0:17,0:16:36.12:0,36,574	0/0:12,0:11:24.08:0,24,383	0/0:30,0:21:48.16:0,48,756	0/0:31,0:20:39.09:0,39,595	0/0:19,0:19:54.17:0,54,838	0/0:24,0:21:57.19:0,57,910	0/0:28,0:15:21.07:0,21,335	0/0:10,0:9:18.06:0,18,287	0/0:17,0:17:23.82:0,24,383	0/0:22,0:21:39.13:0,39,622	0/0:13,0:12:27.09:0,27,430	0/0:24,0:24:69.23:0,69,1094	0/0:23,0:20:44.90:0,45,717	0/0:15,0:12:33.08:0,33,483
chr10	64961900	.	TGTGTGTG	T	1028.79	PASS	AB=0.875;AC=15;AF=0.268;AN=56;BaseQRankSum=10.377;DP=643;FS=13.333;HRun=0;HaplotypeScore=180.9418;InbreedingCoeff=-0.3704;MQ=59.69;MQ0=19;MQRankSum=-5.457;QD=3.45;ReadPosRankSum=1.408;VQSLOD=1.9621;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:42:99:0,102,2380	0/1:5,1:5:35.54:36,0,76	0/0:46,0:17:48.11:0,48,554	0/0:46,0:23:66.20:0,66,824	0/0:19,0:19:40.99:0,41,299	0/0:8,3:9:11.65:0,12,77	0/1:23,2:24:99:106,0,222	0/0:35,0:34:90.63:0,91,463	0/0:14,0:14:39.13:0,39,728	0/1:21,0:22:19.86:20,0,207	0/0:16,1:16:37.82:0,38,214	0/1:14,4:17:78.58:154,0,79	0/0:18,0:18:48.63:0,49,1037	0/0:12,1:13:32.11:0,32,206	0/1:9,3:15:54.11:54,0,77	0/1:14,1:15:12.31:12,0,193	0/1:13,0:14:91.72:92,0,236	0/0:20,0:19:7.35:0,7,250	0/1:29,3:32:92.24:92,0,288	0/1:7,4:12:72.35:73,0,72	0/1:34,1:35:16.24:16,0,346	0/1:20,0:19:46.07:46,0,190	0/0:14,0:14:24.08:0,24,630	0/0:46,0:45:99:0,114,2910	0/1:13,2:16:56.07:56,0,85	0/1:29,1:31:99:107,0,242	0/1:17,3:22:99:193,0,225	0/1:11,2:14:99:128,0,129
chr10	64963496	.	AGAGGAAGAGGAG	A	5344.05	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=7.313;DP=523;FS=1.678;HRun=0;HaplotypeScore=120.4360;InbreedingCoeff=0.7521;MQ=51.19;MQ0=37;MQRankSum=0.553;QD=15.72;ReadPosRankSum=0.326;VQSLOD=3.6801;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:22:24.23:361,24,0	1/1:1,10:11:3.01:79,3,0	0/0:14,0:6:15.01:0,15,198	0/0:16,0:7:11.98:0,12,114	1/1:16,0:12:15.78:192,16,0	1/1:1,19:19:18.02:523,18,0	1/1:4,15:18:2.94:79,3,0	0/0:18,0:12:22.16:0,22,156	0/0:16,0:15:42.04:0,42,1273	1/1:3,13:14:35.77:576,36,0	1/1:2,6:7:5.12:77,5,0	1/1:4,14:16:3.01:105,3,0	0/0:17,0:16:39.09:0,39,1206	1/1:2,8:8:3.01:109,3,0	1/1:0,15:15:6.24:221,6,0	1/1:15,0:14:9.39:146,9,0	1/1:4,30:31:8.31:331,8,0	1/1:4,13:17:2.98:21,3,0	1/1:14,13:18:14.44:446,14,0	1/1:0,17:17:38.63:434,39,0	0/0:8,41:46:4.23:0,4,25	1/1:3,10:12:14.83:100,15,0	0/0:16,0:14:36.08:0,36,887	0/0:37,0:37:99:0,108,3884	1/1:13,1:13:33.02:482,33,0	1/1:7,17:19:41.73:739,42,0	1/1:2,13:13:5.93:221,6,0	1/1:5,0:5:13.79:101,14,0
chr10	64963499	.	GGAA	G	1767.54	PASS	AB=0.964;AC=26;AF=0.464;AN=56;BaseQRankSum=4.582;DP=506;FS=7.543;HRun=0;HaplotypeScore=81.8842;InbreedingCoeff=0.2460;MQ=51.52;MQ0=33;MQRankSum=-2.401;QD=5.95;ReadPosRankSum=1.695;VQSLOD=0.8883;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:22:99:145,0,156	0/0:11,0:11:1.72:0,2,5	0/0:14,0:6:14.98:0,15,152	0/0:15,0:6:8.77:0,9,90	1/1:16,0:12:29.76:250,30,0	1/1:21,0:19:17.71:128,18,0	0/0:17,0:16:2.04:0,2,6	0/1:10,7:12:2.82:254,0,3	0/0:17,0:16:45.03:0,45,650	0/1:16,0:14:5.37:183,0,5	0/0:6,0:6:3.85:0,4,22	1/1:17,0:15:2.98:21,3,0	0/0:17,0:16:31.03:0,31,570	1/1:10,0:8:3:25,3,0	1/1:15,0:15:5.84:52,6,0	1/1:15,0:14:8.90:65,9,0	1/1:33,0:30:8.73:78,9,0	1/1:15,0:15:2.98:21,3,0	0/1:22,0:16:55.53:134,0,56	0/1:17,0:17:99:118,0,125	0/0:47,0:43:2.98:0,3,22	0/0:13,0:12:14.92:0,15,142	0/0:14,0:12:35.90:0,36,469	0/0:38,0:38:99:0,114,1843	0/1:14,0:12:16.21:193,0,16	0/1:24,0:19:72.52:145,0,73	1/1:15,0:13:5.91:52,6,0	0/1:6,0:6:56.84:80,0,57
chr10	64963502	.	AGAGGAG	A	2105.08	PASS	AC=38;AF=0.704;AN=54;BaseQRankSum=8.449;DP=498;FS=10.039;HRun=0;HaplotypeScore=95.1152;InbreedingCoeff=0.7057;MQ=51.74;MQ0=36;MQRankSum=-1.812;QD=6.86;ReadPosRankSum=0.465;VQSLOD=1.2831;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:18:26.38:196,26,0	1/1:11,0:11:2.10:37,2,0	0/0:17,0:8:8.12:0,8,105	0/0:13,0:6:8.80:0,9,57	1/1:13,0:12:5.60:48,6,0	1/1:21,0:19:15.05:219,15,0	1/1:16,0:15:3.01:38,3,0	0/0:17,0:13:26.70:0,27,188	0/0:16,0:15:33.05:0,33,674	1/1:15,0:13:15.48:184,15,0	1/1:6,0:6:5.97:59,6,0	1/1:17,0:15:3.01:43,3,0	0/0:14,0:13:27.06:0,27,565	1/1:10,0:8:3.01:46,3,0	1/1:15,0:15:5.89:95,6,0	1/1:4,11:13:3.48:55,3,0	1/1:34,0:31:5.74:138,6,0	./.	1/1:23,0:16:16.11:160,16,0	1/1:17,0:17:18.76:147,19,0	0/0:47,0:43:0:0,0,0	1/1:11,0:10:14.74:100,15,0	0/0:14,0:12:27.04:0,27,379	0/0:39,0:39:87.16:0,87,2026	1/1:13,0:11:14.70:169,15,0	1/1:23,0:18:27.44:311,27,0	1/1:15,0:13:6.02:98,6,0	1/1:9,0:9:17.86:143,18,0
chr10	64963570	.	GGTAT	G	697.31	PASS	AB=0.962;AC=16;AF=0.296;AN=54;BaseQRankSum=4.000;DP=615;FS=3.428;HRun=0;HaplotypeScore=140.0229;InbreedingCoeff=0.0838;MQ=68.81;MQ0=6;MQRankSum=1.641;QD=2.60;ReadPosRankSum=-2.268;VQSLOD=2.3764;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:20,0:21:11.36:65,0,11	0/1:9,0:9:5.17:5,0,129	0/0:23,0:18:0.47:0,0,1	./.	0/0:23,0:22:24.03:0,24,434	0/0:22,0:22:17.87:0,18,474	0/0:27,0:27:24.08:0,24,425	0/0:36,0:34:5.98:0,6,59	0/1:12,12:24:17.80:208,0,18	0/0:21,0:20:15.36:0,15,749	0/0:24,0:23:27.34:0,27,474	0/0:24,0:24:12.64:0,13,646	1/1:12,6:18:6.02:92,6,0	0/0:10,0:10:9.50:0,10,170	0/1:21,0:21:23.39:23,0,318	0/0:34,0:34:32.65:0,33,974	0/0:27,0:27:24.02:0,24,334	0/0:8,0:8:12.04:0,12,209	0/0:24,0:24:21.07:0,21,354	0/1:19,0:19:29.52:30,0,163	0/1:36,0:36:8.50:9,0,501	0/1:17,0:17:6.40:6,0,287	1/1:9,7:17:12.04:184,12,0	1/1:18,12:30:9.03:138,9,0	0/0:28,0:28:32.09:0,32,648	0/1:18,0:18:64.08:64,0,380	0/1:22,0:22:11.48:11,0,514	0/1:16,0:16:20.76:21,0,309
chr10	64963620	.	T	TCATTCATTCATTC	27365.53	PASS	AB=0.948;AC=24;AF=0.429;AN=56;BaseQRankSum=8.508;DP=665;FS=6.444;HRun=0;HaplotypeScore=247.8769;InbreedingCoeff=-0.5080;MQ=45.23;MQ0=25;MQRankSum=-11.317;QD=48.87;ReadPosRankSum=-7.439;VQSLOD=2.3804;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:30:55.80:883,56,0	0/1:10,0:10:53.68:929,0,54	0/0:11,0:6:12.01:0,12,271	0/0:10,0:3:9.03:0,9,358	0/1:13,0:24:81.90:82,0,178	0/1:26,0:26:99:1890,0,174	0/1:25,0:24:99:659,0,357	0/1:52,0:39:99:184,0,841	0/0:23,0:23:42.14:0,42,1506	0/1:27,1:28:99:1596,0,389	0/1:29,0:29:99:1551,0,219	0/1:21,2:23:99:1807,0,267	0/0:15,0:15:33.11:0,33,1231	0/1:15,1:16:37.86:1449,0,38	0/1:17,2:19:99:1321,0,247	0/1:26,1:27:99:956,0,637	0/1:16,0:16:99:712,0,194	0/1:9,0:15:99:458,0,179	0/1:28,0:22:99:1019,0,311	1/1:33,0:34:0.90:2776,1,0	0/1:23,0:23:99:733,0,328	0/1:30,0:30:41.49:2377,0,41	0/0:26,0:26:65.85:0,66,2540	0/0:20,0:20:33.06:0,33,892	0/1:42,2:44:99:3611,0,224	0/1:21,1:21:99:843,0,235	0/1:21,1:22:99:819,0,379	0/1:16,0:15:99:713,0,256
chr10	64964022	.	CT	C	1291	PASS	AB=0.732;AC=35;AF=0.625;AN=56;BaseQRankSum=-0.195;DP=449;FS=1.206;HRun=17;HaplotypeScore=70.1253;InbreedingCoeff=0.0396;MQ=67.79;MQ0=16;MQRankSum=-0.509;QD=3.51;ReadPosRankSum=2.338;VQSLOD=-0.0337;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,1:33:32.33:0,32,256	1/1:2,2:4:2.88:17,3,0	1/1:19,1:11:0.65:2,1,0	0/0:13,0:9:5.58:0,6,27	0/1:7,9:19:15.76:89,0,16	0/1:8,6:14:4.32:70,0,4	1/1:5,9:14:13.65:82,14,0	1/1:12,0:29:3.28:44,3,0	0/0:7,2:10:6.84:0,7,124	0/1:12,5:17:7.25:53,0,7	1/1:3,7:12:1.55:99,2,0	1/1:7,1:9:4.77:22,5,0	0/0:9,1:10:1.33:0,1,102	0/1:10,2:10:9.34:50,0,9	1/1:5,7:10:13.69:72,14,0	0/1:7,3:11:13.10:37,0,13	1/1:9,16:27:20.35:139,20,0	1/1:5,14:22:15.03:166,15,0	0/1:14,4:20:15.59:100,0,16	0/1:13,12:28:16.91:108,0,17	1/1:6,2:10:9.86:54,10,0	0/1:10,7:16:19.30:19,0,54	0/1:10,2:13:12.57:13,0,99	0/0:10,0:9:20.91:0,21,162	1/1:4,2:9:15.68:77,16,0	0/1:7,3:11:10.43:42,0,10	1/1:8,9:19:19.31:90,19,0	0/1:6,5:10:11.02:11,0,17
chr10	64964540	.	AGAGAGAGAGAGAGAGAGAGAGC	A	4355.66	PASS	AB=0.972;AC=34;AF=0.607;AN=56;BaseQRankSum=4.789;DP=608;FS=38.844;HRun=0;HaplotypeScore=252.6324;InbreedingCoeff=0.0231;MQ=53.92;MQ0=28;MQRankSum=-1.072;QD=8.57;ReadPosRankSum=0.422;VQSLOD=2.4214;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:39,0:36:99:125,0,1677	1/1:12,0:12:7.43:61,7,0	0/0:13,0:3:8.52:0,9,48	0/1:16,0:4:1.52:2,0,39	0/1:23,0:23:2.97:3,0,174	0/1:23,0:22:99:117,0,125	0/1:21,0:19:99:134,0,166	0/1:11,0:11:95.72:96,0,119	0/0:23,0:19:41.68:0,42,1274	0/1:22,0:22:99:239,0,155	0/1:25,0:25:14.46:119,0,14	0/1:35,0:35:59.87:117,0,60	0/0:13,0:13:33.02:0,33,1245	1/1:23,0:23:8.70:332,9,0	1/1:26,0:26:9.02:287,9,0	1/1:23,0:22:5.85:217,6,0	1/1:19,0:17:2.57:183,3,0	1/1:17,0:16:2.75:251,3,0	1/1:13,0:11:10.73:110,11,0	1/1:30,0:29:26.72:502,27,0	0/1:24,0:24:50.09:141,0,50	1/1:22,0:22:3.01:125,3,0	0/0:22,0:20:38.79:0,39,1082	0/0:29,0:28:56.64:0,57,2293	1/1:11,1:11:9.02:266,9,0	0/1:36,0:34:86.90:550,0,87	0/1:13,14:25:50.82:196,0,51	1/1:3,6:8:3.01:184,3,0
chr10	64964542	.	AGAGAGAGAGAGAGAGAGAGC	A	5964.02	PASS	AB=0.930;AC=40;AF=0.714;AN=56;BaseQRankSum=5.298;DP=573;FS=16.967;HRun=0;HaplotypeScore=215.3885;InbreedingCoeff=0.3524;MQ=56.35;MQ0=26;MQRankSum=-2.853;QD=12.72;ReadPosRankSum=-0.895;VQSLOD=2.5934;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:38,0:35:99:153,0,1364	1/1:11,0:11:11.97:96,12,0	0/0:16,0:4:11.48:0,11,67	0/1:17,0:6:3.63:4,0,63	0/1:21,0:21:8.95:9,0,90	0/1:6,16:21:78.65:160,0,79	0/1:20,0:18:57.16:201,0,57	0/1:13,0:13:86.49:185,0,86	0/0:23,0:19:41.67:0,42,1100	1/1:21,0:21:1.35:326,1,0	1/1:3,16:19:3.48:166,3,0	1/1:5,27:32:3.01:170,3,0	0/0:13,0:13:33.02:0,33,1061	1/1:4,19:23:8.61:382,9,0	1/1:5,18:23:9.03:394,9,0	1/1:3,18:21:5.60:284,6,0	1/1:18,0:17:32.81:325,33,0	1/1:16,0:15:30.57:429,31,0	1/1:10,0:8:14.15:146,14,0	1/1:5,23:27:23.75:589,24,0	1/1:22,0:22:26.42:208,26,0	1/1:6,14:20:3.01:166,3,0	0/0:23,0:21:38.79:0,39,956	0/0:29,0:28:56.60:0,57,1998	1/1:12,0:11:9.02:267,9,0	1/1:7,23:28:57.81:816,58,0	1/1:26,0:23:14.46:337,14,0	1/1:6,0:6:3.01:151,3,0
chr10	64964543	.	G	GC	427.69	PASS	AB=0.977;AC=18;AF=0.321;AN=56;BaseQRankSum=6.436;DP=556;FS=2.352;HRun=0;HaplotypeScore=122.5643;InbreedingCoeff=0.0648;MQ=58.54;MQ0=26;MQRankSum=-4.393;QD=1.65;ReadPosRankSum=-2.771;VQSLOD=2.3199;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:34:65.30:0,65,907	0/1:8,0:8:33.95:34,0,71	0/0:17,0:5:11.76:0,12,111	0/0:21,0:9:12.66:0,13,138	0/0:22,0:22:5.64:0,6,82	0/1:20,1:20:15.83:16,0,35	0/0:18,0:16:35.13:0,35,428	0/0:14,0:14:24.07:0,24,314	0/0:23,0:19:41.25:0,41,577	0/1:17,1:18:48.09:48,0,566	0/0:17,2:19:2.68:0,3,12	0/0:30,0:30:2.22:0,2,7	0/0:14,0:14:33.11:0,33,456	1/1:21,1:22:8.88:82,9,0	1/1:22,0:22:3.85:32,4,0	0/1:20,0:20:10.21:10,0,10	0/1:17,0:16:54.11:54,0,176	0/1:15,1:15:99:107,0,195	0/1:10,0:8:3.92:4,0,227	0/1:25,0:24:3.90:4,0,132	0/0:21,0:21:22.32:0,22,293	1/1:18,0:18:3:25,3,0	0/0:24,0:22:39.12:0,39,523	0/0:31,0:30:53.24:0,53,740	0/1:11,1:11:29.37:29,0,40	0/1:26,0:24:35.35:35,0,233	1/1:24,0:21:5.72:106,6,0	0/0:6,0:6:2.37:0,2,8
chr10	64964545	.	G	GC	500.05	PASS	AB=0.934;AC=15;AF=0.268;AN=56;BaseQRankSum=6.792;DP=536;FS=5.350;HRun=0;HaplotypeScore=114.6791;InbreedingCoeff=0.2524;MQ=59.68;MQ0=25;MQRankSum=-3.744;QD=2.35;ReadPosRankSum=-1.359;VQSLOD=2.5741;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:32:65.28:0,65,892	0/0:6,1:7:9.01:0,9,107	0/0:19,0:6:10.94:0,11,168	0/0:21,0:10:18.81:0,19,222	0/0:21,0:21:6:0,6,57	0/1:19,0:18:35.27:39,0,35	0/0:17,0:15:7.82:0,8,330	0/0:15,0:15:30.09:0,30,399	0/0:24,0:20:41.18:0,41,537	0/0:16,0:16:33.42:0,33,606	0/0:19,0:19:2.74:0,3,12	0/0:28,0:28:2.22:0,2,7	0/0:14,0:14:36.09:0,36,462	1/1:22,0:22:8.86:93,9,0	1/1:21,0:21:9.02:108,9,0	0/1:20,0:20:1.84:34,0,2	0/1:14,2:15:41.30:41,0,223	0/1:11,2:12:73.24:73,0,238	0/0:10,0:8:20.90:0,21,275	0/1:25,0:24:27.44:27,0,136	0/0:16,0:16:24.08:0,24,328	1/1:18,0:18:3.01:45,3,0	0/0:24,0:22:45.12:0,45,588	0/0:31,0:30:59.24:0,59,804	0/1:8,3:10:37.10:37,0,41	0/1:26,0:24:55.81:56,0,244	1/1:21,1:19:11.47:109,11,0	0/0:6,0:6:2.37:0,2,8
chr10	64964560	.	AGC	A	4182.05	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=4.190;DP=557;FS=1.628;HRun=0;HaplotypeScore=97.7432;InbreedingCoeff=0.7479;MQ=72.36;MQ0=17;MQRankSum=-3.322;QD=10.15;ReadPosRankSum=2.220;VQSLOD=3.6066;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:24:56.87:459,57,0	1/1:8,0:8:11.99:100,12,0	0/0:27,0:14:34.46:0,34,277	0/0:36,0:22:42.45:0,42,476	1/1:1,18:19:5.94:43,6,0	1/1:18,0:17:5.94:40,6,0	1/1:17,0:16:32.77:263,33,0	1/1:2,23:25:65.87:544,66,0	0/0:26,0:23:44.48:0,44,325	1/1:24,0:24:65.88:578,66,0	1/1:17,0:17:2.98:22,3,0	1/1:28,0:28:3:25,3,0	0/0:11,0:11:26.93:0,27,242	1/1:21,0:21:5.99:49,6,0	1/1:20,0:20:5.99:49,6,0	1/1:20,0:20:6:51,6,0	1/1:16,0:15:30.25:221,30,0	1/1:11,0:10:23.78:187,24,0	1/1:18,0:16:45:407,45,0	1/1:24,0:23:20.66:138,21,0	1/1:23,0:23:44.94:374,45,0	1/1:17,0:17:2.98:21,3,0	0/0:22,0:22:44.55:0,45,328	0/0:23,0:23:50.37:0,50,403	1/1:12,0:11:20.99:179,21,0	1/1:25,0:23:50.66:397,51,0	1/1:17,0:15:2.49:9,2,0	1/1:6,0:6:3:26,3,0
chr10	64964635	.	CAGA	C	1234.99	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=1.400;DP=735;FS=14.789;HRun=0;HaplotypeScore=137.4404;InbreedingCoeff=0.9988;MQ=88.17;MQ0=0;MQRankSum=-2.775;QD=37.42;ReadPosRankSum=-4.603;VQSLOD=2.7100;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,129,3049	0/0:12,0:12:36.12:0,36,887	0/0:27,0:27:78.21:0,78,1811	0/0:26,0:26:78.27:0,78,1842	0/0:27,0:27:78.27:0,78,1921	0/0:25,0:25:54.19:0,54,1331	0/0:21,0:21:60.19:0,60,1388	1/1:0,33:33:83.97:1330,84,0	0/0:25,0:25:69.19:0,69,1608	0/0:28,0:28:84.29:0,84,2032	0/0:25,0:25:69.24:0,69,1688	0/0:30,0:30:57.20:0,57,1395	0/0:16,0:16:48.16:0,48,1182	0/0:34,0:34:81.28:0,81,1996	0/0:34,0:34:90.31:0,90,2199	0/0:32,0:32:78.27:0,78,1908	0/0:20,0:20:60.19:0,60,1413	0/0:20,0:20:57.20:0,57,1399	0/0:21,0:21:63.21:0,63,1492	0/0:23,0:23:66.23:0,66,1585	0/0:38,0:38:99:0,111,2661	0/0:21,0:21:57.20:0,57,1395	0/0:27,0:27:81.28:0,81,1942	0/0:37,0:37:99:0,108,2626	0/0:25,0:25:75.26:0,75,1812	0/0:31,0:31:93.30:0,93,2199	0/0:21,0:21:54.19:0,54,1323	0/0:12,0:12:27.09:0,27,623
chr10	64965449	.	C	CT	753.98	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.644;DP=628;FS=0.000;HRun=1;HaplotypeScore=61.7926;InbreedingCoeff=0.9622;MQ=79.32;MQ0=0;MQRankSum=-2.400;QD=37.70;ReadPosRankSum=-3.008;VQSLOD=2.8404;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,129,1630	0/0:11,0:11:33.11:0,33,427	0/0:20,0:18:54.08:0,54,616	0/0:16,0:16:13.44:0,13,347	0/0:27,0:27:78.22:0,78,979	0/0:33,0:33:99:0,99,1269	0/0:32,0:32:93.28:0,93,1189	1/1:1,19:20:60.18:849,60,0	0/0:16,0:16:48.14:0,48,608	0/0:13,0:13:39.12:0,39,485	0/0:19,0:19:51.17:0,51,660	0/0:27,0:27:81.26:0,81,1050	0/0:10,0:10:30.09:0,30,377	0/0:33,0:33:98.57:0,99,1201	0/0:19,0:19:57.17:0,57,725	0/0:23,0:23:69.22:0,69,894	0/0:31,0:31:93.30:0,93,1202	0/0:21,0:21:60.17:0,60,748	0/0:19,0:19:51.13:0,51,630	0/0:18,0:18:48.09:0,48,589	0/0:42,0:42:99:0,114,1417	0/0:19,0:19:54.10:0,54,667	0/0:19,0:19:57.11:0,57,674	0/0:21,0:21:60.19:0,60,766	0/0:19,0:19:51.12:0,51,642	0/0:21,0:21:63.18:0,63,781	0/0:29,0:29:87.24:0,87,1089	0/0:6,0:6:15.02:0,15,164
chr10	64965785	.	AT	A	8115.31	PASS	AB=1.000;AC=43;AF=0.768;AN=56;BaseQRankSum=2.284;DP=531;FS=2.081;HRun=10;HaplotypeScore=68.9889;InbreedingCoeff=0.8648;MQ=75.87;MQ0=0;MQRankSum=-1.690;QD=19.46;ReadPosRankSum=2.210;VQSLOD=5.8678;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,32:38:99:872,102,0	1/1:0,11:11:26.99:234,27,0	0/0:28,0:23:15.33:0,15,211	0/0:12,0:9:23.94:0,24,218	1/1:7,22:29:59.78:488,60,0	1/1:5,14:19:50.95:436,51,0	1/1:2,8:10:20.99:182,21,0	0/1:24,0:23:46.25:46,0,61	0/0:17,0:17:42.08:0,42,447	1/1:7,12:19:23.26:345,23,0	1/1:3,11:15:35.02:292,35,0	1/1:0,11:11:29.99:259,30,0	0/0:22,1:23:31.40:0,31,563	1/1:3,14:17:32.99:286,33,0	1/1:2,10:12:32.96:279,33,0	1/1:4,9:13:29.98:256,30,0	1/1:9,18:29:66.83:544,67,0	1/1:2,19:21:62.96:540,63,0	1/1:7,16:23:56.96:487,57,0	1/1:5,23:28:71.89:609,72,0	1/1:2,14:16:38.99:339,39,0	1/1:2,8:10:17.98:156,18,0	0/0:20,0:20:42.09:0,42,443	0/0:13,1:14:7.02:0,7,296	1/1:5,10:16:31.98:259,32,0	1/1:6,19:25:65.94:563,66,0	1/1:9,19:28:65.95:564,66,0	1/1:0,3:3:9:78,9,0
chr10	64966426	.	TA	T	6879.17	PASS	AB=0.722;AC=43;AF=0.768;AN=56;BaseQRankSum=3.214;DP=600;FS=3.831;HRun=13;HaplotypeScore=59.6154;InbreedingCoeff=0.5682;MQ=60.02;MQ0=22;MQRankSum=2.292;QD=12.81;ReadPosRankSum=2.836;VQSLOD=5.2188;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:12,35:48:36.09:579,36,0	0/1:2,7:9:8.29:110,0,8	0/1:14,1:5:0.06:0,0,15	0/0:12,0:7:5.74:0,6,37	1/1:5,27:32:57.27:451,57,0	1/1:3,22:25:62.63:459,63,0	1/1:4,7:11:17.89:131,18,0	1/1:24,0:21:17.37:61,17,0	0/0:17,0:17:48.08:0,48,466	1/1:8,17:25:28:327,28,0	1/1:9,12:20:6.58:211,7,0	1/1:7,13:19:29.56:209,30,0	0/0:19,0:19:48.05:0,48,457	1/1:4,13:17:29.82:219,30,0	1/1:5,16:21:20.59:305,21,0	1/1:3,18:21:50.71:372,51,0	1/1:7,18:25:47.71:350,48,0	1/1:6,25:32:42.39:473,42,0	1/1:10,21:30:35.32:428,35,0	1/1:4,18:22:34.26:350,34,0	0/1:4,12:17:17.53:206,0,18	1/1:3,11:13:29.78:215,30,0	0/0:14,1:15:11.13:0,11,264	0/1:7,1:8:3.35:3,0,123	1/1:6,16:22:43.79:312,44,0	1/1:9,31:39:86.27:623,86,0	1/1:2,20:21:50.70:372,51,0	0/1:6,7:11:8.31:110,0,8
chr10	64966434	.	AAAAAAG	A	935.09	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-2.311;DP=607;FS=10.347;HRun=0;HaplotypeScore=142.6570;InbreedingCoeff=0.9784;MQ=63.65;MQ0=14;MQRankSum=-4.693;QD=35.97;ReadPosRankSum=-3.628;VQSLOD=2.1292;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,99,2033	0/0:11,0:11:30.06:0,30,529	0/0:18,0:8:18.99:0,19,353	0/0:13,0:9:17.76:0,18,329	0/0:32,0:32:81.63:0,82,1518	0/0:26,0:26:72.23:0,72,1441	0/0:11,0:11:29.95:0,30,520	1/1:5,21:25:66.03:1030,66,0	0/0:19,0:19:54.17:0,54,1568	0/0:26,0:26:57.17:0,57,1136	0/0:24,0:23:65.98:0,66,1193	0/0:18,0:17:30.09:0,30,590	0/0:21,0:21:60.17:0,60,1624	0/0:16,0:16:30.09:0,30,574	0/0:22,0:22:54.17:0,54,1105	0/0:21,0:21:57.20:0,57,1210	0/0:21,0:21:54.18:0,54,1114	0/0:31,0:31:74.99:0,75,1555	0/0:30,0:30:83.33:0,83,1490	0/0:26,0:26:71.83:0,72,1238	0/0:16,0:16:45.12:0,45,932	0/0:15,0:14:39.13:0,39,812	0/0:13,0:13:33.11:0,33,1037	0/0:8,0:8:21.51:0,22,496	0/0:20,0:20:45.09:0,45,840	0/0:40,0:39:88.95:0,89,2150	0/0:25,0:24:60.19:0,60,1184	0/0:15,0:13:27.06:0,27,520
chr10	64966932	.	TA	T	10355.54	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=8.201;DP=663;FS=4.268;HRun=9;HaplotypeScore=70.1291;InbreedingCoeff=0.9992;MQ=72.66;MQ0=0;MQRankSum=-2.180;QD=23.32;ReadPosRankSum=1.019;VQSLOD=5.8502;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:93.22:0,93,1049	1/1:1,8:9:24.01:220,24,0	0/0:18,0:17:25.65:0,26,306	0/0:15,0:15:26.53:0,27,335	0/0:23,0:23:63.17:0,63,717	1/1:1,15:16:45.02:412,45,0	1/1:2,24:26:66.03:604,66,0	0/0:7,0:33:77.13:0,77,416	0/0:21,0:21:63.18:0,63,719	1/1:2,31:33:93.01:838,93,0	1/1:2,31:33:92.87:818,93,0	1/1:3,17:20:45.02:412,45,0	0/0:17,0:17:45.08:0,45,499	1/1:5,15:20:42.02:384,42,0	1/1:1,27:28:75.03:686,75,0	1/1:2,22:24:60.03:549,60,0	1/1:4,24:29:74.07:665,74,0	1/1:2,20:22:57.03:522,57,0	1/1:1,18:19:53.98:480,54,0	1/1:2,25:27:66:597,66,0	1/1:1,25:26:72.04:659,72,0	1/1:1,29:30:86.97:785,87,0	0/0:25,0:25:69.19:0,69,786	0/0:33,0:33:93.28:0,93,1073	1/1:4,10:14:30.01:275,30,0	1/1:2,19:21:57.01:515,57,0	1/1:10,23:33:42.37:553,42,0	1/1:0,14:14:42.02:384,42,0
chr10	64967428	.	T	TTAA	1259.91	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.859;DP=635;FS=0.875;HRun=0;HaplotypeScore=88.3050;InbreedingCoeff=0.9998;MQ=85.29;MQ0=0;MQRankSum=-5.898;QD=57.27;ReadPosRankSum=-1.224;VQSLOD=4.8896;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,123,2281	0/0:14,0:14:42.13:0,42,749	0/0:25,0:25:72.23:0,72,1304	0/0:14,0:15:41.88:0,42,723	0/0:15,0:15:45.15:0,45,826	0/0:26,0:26:78.27:0,78,1450	0/0:21,0:21:60.19:0,60,1086	1/1:2,20:22:57.20:1355,57,0	0/0:23,0:23:66.23:0,66,1230	0/0:17,0:17:51.17:0,51,940	0/0:13,0:13:36.12:0,36,671	0/0:26,0:26:78.27:0,78,1434	0/0:30,0:30:87.29:0,87,1576	0/0:25,0:25:75.24:0,75,1354	0/0:27,0:27:81.26:0,81,1470	0/0:22,0:22:66.21:0,66,1199	0/0:23,0:23:66.23:0,66,1218	0/0:16,0:16:48.14:0,48,847	0/0:23,0:23:69.23:0,69,1263	0/0:22,0:22:63.22:0,63,1163	0/0:32,0:32:93.30:0,93,1689	0/0:19,0:19:54.05:0,54,999	0/0:21,0:21:57.19:0,57,1055	0/0:30,0:30:90.31:0,90,1677	0/0:18,0:18:54.18:0,54,990	0/0:29,0:29:87.29:0,87,1576	0/0:23,0:23:66.21:0,66,1189	0/0:16,0:16:48.16:0,48,895
chr10	64968419	.	TTGTGTGTGTGTG	T	104.35	PASS	AC=2;AF=0.037;AN=54;BaseQRankSum=3.576;DP=518;FS=2.443;HRun=0;HaplotypeScore=170.8380;InbreedingCoeff=0.2794;MQ=57.30;MQ0=6;MQRankSum=-3.480;QD=2.37;ReadPosRankSum=-2.581;VQSLOD=2.4642;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:28,16:43:6.02:184,6,0	0/0:7,0:7:3.01:0,3,157	0/0:17,0:7:6.02:0,6,84	./.	0/0:17,0:17:9.03:0,9,411	0/0:21,0:20:6:0,6,181	0/0:17,0:17:21.05:0,21,819	0/0:16,0:16:11.83:0,12,336	0/0:11,0:11:9.50:0,10,513	0/0:24,0:23:45.15:0,45,2244	0/0:17,0:18:8.12:0,8,362	0/0:12,0:12:3.01:0,3,121	0/0:14,0:14:11.90:0,12,663	0/0:11,0:11:12.04:0,12,421	0/0:13,0:13:5.10:0,5,188	0/0:13,0:13:6.49:0,6,254	0/0:22,0:34:25.33:0,25,901	0/0:19,0:18:24.01:0,24,834	0/0:16,0:16:14.06:0,14,546	0/0:15,0:14:9.03:0,9,385	0/0:34,0:33:20.81:0,21,1158	0/0:13,0:13:2.14:0,2,70	0/0:17,0:18:33.11:0,33,1363	0/0:24,0:26:48.16:0,48,2451	0/0:19,0:19:9.02:0,9,450	0/0:17,0:17:24.07:0,24,941	0/0:18,0:18:14.71:0,15,843	0/0:8,0:8:6.96:0,7,234
chr10	64968931	.	C	CT	1033.33	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.976;DP=639;FS=10.127;HRun=1;HaplotypeScore=69.6487;InbreedingCoeff=0.9962;MQ=81.64;MQ0=0;MQRankSum=-3.004;QD=41.33;ReadPosRankSum=-1.966;VQSLOD=2.8031;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,141,1938	0/0:9,0:9:27.09:0,27,377	0/0:19,0:19:51.15:0,51,670	0/0:15,0:15:38.94:0,39,488	0/0:17,0:17:42.07:0,42,549	0/0:23,0:23:63.21:0,63,879	0/0:22,0:22:63.18:0,63,855	1/1:0,25:25:72.23:1128,72,0	0/0:19,0:19:57.19:0,57,794	0/0:18,0:18:48.05:0,48,621	0/0:14,0:14:36.03:0,36,459	0/0:30,0:30:87.20:0,87,1153	0/0:21,0:21:63.20:0,63,858	0/0:27,0:27:78.26:0,78,1084	0/0:33,0:33:99:0,99,1360	0/0:22,0:22:66.22:0,66,921	0/0:28,0:28:84.16:0,84,1091	0/0:41,0:41:99:0,123,1691	0/0:23,0:23:63.19:0,63,844	0/0:12,0:12:30.09:0,30,396	0/0:39,0:39:99:0,114,1567	0/0:21,0:21:48.11:0,48,634	0/0:20,0:20:54.12:0,54,712	0/0:30,0:30:90.26:0,90,1231	0/0:14,0:14:42.10:0,42,563	0/0:16,0:16:45.15:0,45,625	0/0:22,0:22:66.20:0,66,901	0/0:8,0:8:24.08:0,24,331
chr10	64969539	.	AAG	A	3050.53	PASS	AB=0.675;AC=19;AF=0.365;AN=52;BaseQRankSum=12.529;DP=422;FS=0.411;HRun=0;HaplotypeScore=189.9434;InbreedingCoeff=-0.5686;MQ=38.87;MQ0=13;MQRankSum=-6.128;QD=12.45;ReadPosRankSum=4.737;VQSLOD=3.5332;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:84.27:0,84,1491	0/1:2,2:5:59.42:59,0,76	./.	./.	0/0:25,0:23:54.16:0,54,861	0/1:9,10:19:99:251,0,224	0/1:7,6:13:99:134,0,189	0/0:19,0:16:45.94:0,46,363	0/0:17,0:17:45.15:0,45,829	0/1:10,7:16:99:224,0,201	0/1:3,9:12:99:162,0,149	0/1:7,11:18:99:320,0,149	0/0:21,0:21:63.20:0,63,1105	0/1:4,6:10:63.75:173,0,64	0/1:6,8:14:99:188,0,160	0/1:4,9:13:99:230,0,111	0/1:7,4:11:89.87:90,0,196	0/1:8,7:16:99:212,0,319	0/1:8,1:9:9.85:10,0,314	0/1:4,6:10:96.91:170,0,97	0/1:7,4:11:17.07:17,0,154	0/1:5,2:7:14.14:14,0,168	0/0:22,0:22:57.06:0,57,1004	0/0:32,0:31:87.27:0,87,1455	0/1:7,10:17:99:274,0,190	0/1:10,10:21:99:358,0,239	0/1:5,8:13:99:163,0,199	0/1:4,5:9:51.46:155,0,51
chr10	64969543	.	AAGGAAG	A	6895.40	PASS	AB=0.686;AC=21;AF=0.404;AN=52;BaseQRankSum=5.091;DP=440;FS=1.711;HRun=0;HaplotypeScore=223.0898;InbreedingCoeff=-0.5177;MQ=38.56;MQ0=12;MQRankSum=-7.414;QD=24.37;ReadPosRankSum=3.894;VQSLOD=4.2379;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:87.04:0,87,1997	0/1:4,2:6:64.58:116,0,65	./.	./.	0/0:26,0:24:56.90:0,57,868	0/1:9,10:19:99:500,0,149	0/1:8,6:14:99:271,0,126	1/1:22,0:19:51.21:469,51,0	0/0:17,0:17:45.07:0,45,1228	0/1:11,7:17:99:414,0,146	0/1:3,9:12:62.69:329,0,63	0/1:10,11:21:99:614,0,187	0/0:21,0:21:63.21:0,63,1606	0/1:6,6:12:99:329,0,131	0/1:5,9:14:99:413,0,103	0/1:4,9:13:60.99:461,0,61	0/1:7,4:11:99:178,0,140	0/1:9,7:16:99:384,0,157	0/1:9,1:10:46.94:47,0,123	0/1:5,6:11:99:331,0,106	0/1:7,4:11:45.84:46,0,102	0/1:5,2:7:48.44:48,0,130	0/0:22,0:22:57.11:0,57,1413	0/0:32,0:31:87.29:0,87,1873	0/1:7,11:18:99:579,0,147	0/1:13,11:23:99:718,0,191	0/1:5,8:13:90.49:366,0,90	0/1:6,5:11:99:283,0,122
chr10	64969548	.	AGG	A	1915.87	PASS	AB=1.000;AC=19;AF=0.365;AN=52;BaseQRankSum=12.022;DP=443;FS=0.384;HRun=2;HaplotypeScore=206.4529;InbreedingCoeff=-0.4192;MQ=38.63;MQ0=12;MQRankSum=-8.145;QD=7.23;ReadPosRankSum=2.560;VQSLOD=0.3180;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:80.68:0,81,1062	0/1:5,0:5:1.73:2,0,34	./.	./.	0/0:27,0:25:53.24:0,53,496	0/1:19,0:19:40.88:106,0,41	0/1:14,0:14:42.59:43,0,106	1/1:3,19:19:57.17:877,57,0	0/0:16,0:16:41.67:0,42,593	0/1:18,0:17:71.13:77,0,71	0/1:12,0:12:59.39:59,0,65	0/1:21,0:21:33.86:147,0,34	0/0:21,0:21:63.16:0,63,1020	0/1:12,0:12:28.39:62,0,28	0/1:14,0:14:32.37:73,0,32	0/1:13,0:13:29.89:87,0,30	0/1:11,0:11:14.05:14,0,113	0/1:15,0:15:73.70:74,0,108	0/1:11,0:11:9.66:10,0,88	0/1:11,0:11:17.53:63,0,18	0/0:11,0:11:0.88:0,1,65	0/0:8,0:8:3.41:0,3,72	0/0:25,0:25:63.05:0,63,1002	0/0:32,0:32:84.16:0,84,1235	0/1:19,0:19:50.82:115,0,51	0/1:24,0:23:64.89:148,0,65	0/1:13,0:13:58.60:59,0,60	0/1:11,0:11:46.94:54,0,47
chr10	64969553	.	AGAG	A	683.44	PASS	AB=0.767;AC=17;AF=0.327;AN=52;BaseQRankSum=1.201;DP=473;FS=1.396;HRun=0;HaplotypeScore=232.7984;InbreedingCoeff=-0.4633;MQ=38.36;MQ0=12;MQRankSum=-5.883;QD=2.58;ReadPosRankSum=-3.810;VQSLOD=1.8688;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:96.32:0,96,1719	0/1:2,3:5:33.97:34,0,54	./.	./.	0/0:23,0:21:37.06:0,37,743	0/1:16,6:22:95.07:95,0,338	0/0:13,2:15:3.95:0,4,361	0/0:26,0:23:65.94:0,66,449	0/0:16,0:16:37.46:0,37,588	0/1:13,6:18:73.91:74,0,375	0/0:11,2:13:16.31:0,16,230	0/1:16,8:24:84.22:84,0,335	0/0:19,0:19:57.11:0,57,1215	0/1:7,5:12:58.43:58,0,145	0/1:11,5:16:57.16:57,0,245	0/1:11,4:15:22.93:23,0,268	0/1:8,2:10:2.56:3,0,213	0/1:17,2:19:20.95:21,0,429	0/1:12,3:15:10.74:11,0,340	0/1:7,5:12:63.95:64,0,185	0/1:11,1:12:1.80:2,0,148	0/1:4,5:9:42.64:43,0,84	0/0:26,0:26:66.21:0,66,1423	0/0:29,0:29:75.26:0,75,1733	0/1:16,7:23:94.13:94,0,370	0/1:17,8:24:79.40:79,0,469	0/1:9,4:13:37.89:38,0,296	0/1:9,5:14:51.69:52,0,201
chr10	64969556	.	GAGAAAGAA	G	3900.04	PASS	AB=1.000;AC=35;AF=0.673;AN=52;BaseQRankSum=10.227;DP=486;FS=1.075;HRun=0;HaplotypeScore=279.5936;InbreedingCoeff=0.5271;MQ=38.72;MQ0=12;MQRankSum=-8.003;QD=12.15;ReadPosRankSum=1.684;VQSLOD=2.3096;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:51.08:0,51,1695	1/1:5,0:5:12.04:146,12,0	./.	./.	0/0:23,0:21:33.41:0,33,754	1/1:23,0:23:25:306,25,0	1/1:15,0:15:11.82:103,12,0	0/0:27,0:24:9.75:0,10,56	1/1:9,6:15:12.04:300,12,0	1/1:19,0:18:28.82:313,29,0	1/1:13,0:13:12.27:100,12,0	1/1:25,0:25:7.68:312,8,0	0/0:20,0:20:39.10:0,39,1264	1/1:12,0:12:18.05:214,18,0	0/1:18,0:18:2.65:189,0,3	0/1:17,0:17:21.76:146,0,22	1/1:12,0:12:14.59:168,15,0	0/1:21,0:21:8.52:150,0,9	1/1:16,0:16:8.95:101,9,0	1/1:12,0:12:4.55:164,5,0	1/1:12,0:12:6.02:69,6,0	0/1:10,0:10:5.25:152,0,5	0/0:24,0:24:39.13:0,39,1399	0/0:29,0:29:66.17:0,66,2335	1/1:23,0:23:16.70:233,17,0	1/1:25,0:24:32.20:362,32,0	0/1:14,0:14:28.46:180,0,28	1/1:14,0:14:13.70:191,14,0
chr10	64969558	.	GAAAGAAAGAAAGAA	G	4286.27	PASS	AB=0.975;AC=32;AF=0.615;AN=52;BaseQRankSum=14.665;DP=496;FS=0.349;HRun=0;HaplotypeScore=347.4616;InbreedingCoeff=0.3440;MQ=38.71;MQ0=11;MQRankSum=-8.017;QD=12.39;ReadPosRankSum=-2.564;VQSLOD=2.3785;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:78.09:0,78,3057	1/1:6,0:6:15.37:116,15,0	./.	./.	0/0:22,0:21:54.64:0,55,1876	1/1:24,0:24:24.52:418,25,0	0/1:17,0:17:55.71:67,0,56	0/1:27,0:24:99:212,0,201	0/0:14,0:14:36.11:0,36,557	1/1:21,0:20:51.16:359,51,0	1/1:14,0:14:23.94:120,24,0	1/1:25,0:26:20.58:358,21,0	0/0:20,0:20:60.20:0,60,2546	1/1:12,0:12:28.73:197,29,0	1/1:18,0:18:28.70:219,29,0	1/1:17,0:17:23.72:285,24,0	0/1:12,0:12:18.85:122,0,19	0/1:22,0:22:61.59:244,0,62	0/1:12,4:16:41.97:237,0,42	1/1:14,0:14:24.29:198,24,0	0/1:12,0:12:16.53:17,0,47	0/1:10,0:10:27.81:101,0,28	0/0:22,0:22:57.15:0,57,2687	0/0:30,0:30:84.24:0,84,4470	1/1:24,0:24:23.85:239,24,0	1/1:25,0:24:33.08:371,33,0	0/1:14,0:14:11.05:242,0,11	1/1:15,0:15:7.73:167,8,0
chr10	64970090	.	C	CT	691.55	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=8.091;DP=481;FS=12.566;HRun=0;HaplotypeScore=52.9050;InbreedingCoeff=0.9864;MQ=77.69;MQ0=0;MQRankSum=-7.734;QD=28.81;ReadPosRankSum=-2.761;VQSLOD=2.0030;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:78.26:0,78,1091	0/0:7,0:7:21.06:0,21,277	0/0:13,0:13:36.10:0,36,470	0/0:9,0:8:21.07:0,21,282	0/0:39,0:39:99:0,114,1594	0/0:30,0:30:90.30:0,90,1258	0/0:10,0:10:27.07:0,27,360	1/1:1,23:24:72.18:786,72,0	0/0:11,0:11:33.11:0,33,461	0/0:18,0:18:54.01:0,54,712	0/0:11,0:11:33.11:0,33,462	0/0:16,0:16:45.15:0,45,627	0/0:11,0:11:33.10:0,33,444	0/0:15,0:15:45.14:0,45,612	0/0:17,0:17:48.16:0,48,671	0/0:23,0:23:69.19:0,69,915	0/0:20,0:20:60.19:0,60,820	0/0:25,0:25:75.25:0,75,1043	0/0:14,0:14:42.13:0,42,573	0/0:17,0:17:51.16:0,51,696	0/0:10,0:10:30.09:0,30,404	0/0:8,0:8:24.08:0,24,336	0/0:14,0:14:42.14:0,42,587	0/0:9,0:9:27.09:0,27,378	0/0:15,0:15:45.15:0,45,629	0/0:29,0:29:87.29:0,87,1217	0/0:27,0:27:81.26:0,81,1112	0/0:12,0:12:36.08:0,36,465
chr10	64970091	.	A	ACT	517.08	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=8.014;DP=475;FS=10.961;HRun=0;HaplotypeScore=63.4121;InbreedingCoeff=0.9858;MQ=77.10;MQ0=0;MQRankSum=-7.969;QD=20.68;ReadPosRankSum=-2.441;VQSLOD=2.0705;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:81.26:0,81,1291	0/0:7,0:7:21.06:0,21,321	0/0:12,0:12:36.10:0,36,520	0/0:9,0:8:21.07:0,21,314	0/0:39,0:39:99:0,117,1884	0/0:30,0:30:90.31:0,90,1462	0/0:9,0:9:27.05:0,27,411	1/1:2,23:25:68.99:612,69,0	0/0:11,0:11:33.11:0,33,538	0/0:18,0:18:54.16:0,54,818	0/0:11,0:11:33.11:0,33,536	0/0:16,0:16:48.15:0,48,757	0/0:11,0:11:30.10:0,30,489	0/0:15,0:15:45.14:0,45,710	0/0:17,0:17:51.16:0,51,807	0/0:21,0:21:63.20:0,63,1004	0/0:19,0:19:57.18:0,57,906	0/0:25,0:25:75.17:0,75,1162	0/0:14,0:14:42.13:0,42,661	0/0:16,0:16:48.16:0,48,781	0/0:10,0:10:30.09:0,30,464	0/0:8,0:8:24.08:0,24,391	0/0:14,0:14:42.14:0,42,682	0/0:10,0:10:27.09:0,27,440	0/0:15,0:15:45.15:0,45,731	0/0:29,0:29:87.30:0,87,1418	0/0:27,0:27:81.26:0,81,1284	0/0:10,0:10:30.10:0,30,489
chr10	64970093	.	TG	T	640.13	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=8.073;DP=476;FS=14.515;HRun=1;HaplotypeScore=52.9819;InbreedingCoeff=0.9861;MQ=77.07;MQ0=0;MQRankSum=-7.074;QD=25.61;ReadPosRankSum=-3.086;VQSLOD=1.6807;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:87.28:0,87,1361	0/0:7,0:7:21.07:0,21,336	0/0:12,0:12:33.11:0,33,500	0/0:9,0:8:21.07:0,21,332	0/0:39,0:39:99:0,117,1868	0/0:31,0:30:93.26:0,93,1430	0/0:9,0:9:27.09:0,27,431	1/1:0,25:25:75.11:735,75,0	0/0:12,0:12:36.12:0,36,573	0/0:16,0:16:48.16:0,48,768	0/0:11,0:11:33.10:0,33,506	0/0:16,0:16:48.16:0,48,768	0/0:11,0:11:33.11:0,33,525	0/0:15,0:15:45.15:0,45,719	0/0:17,0:17:51.17:0,51,815	0/0:21,0:21:63.21:0,63,1007	0/0:18,0:18:54.18:0,54,863	0/0:25,0:25:69.23:0,69,1100	0/0:13,0:13:39.13:0,39,624	0/0:16,0:16:48.16:0,48,761	0/0:9,0:9:27.09:0,27,432	0/0:8,0:8:24.08:0,24,384	0/0:16,0:16:48.15:0,48,739	0/0:10,0:10:30.10:0,30,476	0/0:15,0:15:45.13:0,45,695	0/0:29,0:29:87.30:0,87,1391	0/0:27,0:27:81.28:0,81,1295	0/0:10,0:10:30.10:0,30,479
chr10	64970129	.	GT	G	674.92	PASS	AB=0.833;AC=3;AF=0.054;AN=56;BaseQRankSum=6.524;DP=448;FS=4.942;HRun=9;HaplotypeScore=43.2787;InbreedingCoeff=0.6794;MQ=63.94;MQ0=0;MQRankSum=-0.523;QD=17.76;ReadPosRankSum=0.290;VQSLOD=3.4062;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,30:33:84.04:769,84,0	0/0:8,0:8:21.06:0,21,242	0/0:8,0:8:20.51:0,21,195	0/1:4,1:4:5.47:5,0,83	0/0:33,0:33:93.23:0,93,1058	0/0:25,0:24:69.17:0,69,773	0/0:12,0:12:33.10:0,33,379	0/0:28,0:28:72.21:0,72,830	0/0:9,0:9:27.08:0,27,312	0/0:14,0:14:36.11:0,36,415	0/0:13,0:13:39.12:0,39,450	0/0:16,0:16:48.14:0,48,554	0/0:6,0:6:15.04:0,15,173	0/0:10,0:10:27.08:0,27,311	0/0:17,0:17:45.13:0,45,520	0/0:15,0:15:39.12:0,39,450	0/0:19,0:19:54.16:0,54,623	0/0:25,0:25:54.05:0,54,603	0/0:19,0:20:44.96:0,45,492	0/0:24,0:24:69.19:0,69,786	0/0:5,0:5:15.04:0,15,173	0/0:8,0:8:24.07:0,24,277	0/0:12,0:12:33.10:0,33,381	0/0:8,0:8:21.06:0,21,242	0/0:12,0:13:35.94:0,36,395	0/0:23,0:23:63.19:0,63,727	0/0:27,0:27:78.22:0,78,889	0/0:12,0:12:33.08:0,33,370
chr10	64972081	.	TA	T	4637.96	PASS	AB=0.640;AC=38;AF=0.679;AN=56;BaseQRankSum=4.630;DP=575;FS=9.366;HRun=13;HaplotypeScore=116.9134;InbreedingCoeff=0.7884;MQ=67.75;MQ0=3;MQRankSum=-2.802;QD=12.30;ReadPosRankSum=3.361;VQSLOD=3.7028;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:36:51.12:0,51,263	0/1:3,5:9:18.64:73,0,19	0/0:24,0:16:26.58:0,27,216	0/0:22,0:20:9.61:0,10,151	0/0:26,1:26:35.88:0,36,329	1/1:5,12:18:14.57:255,15,0	1/1:3,10:14:25.88:181,26,0	1/1:6,0:19:26.47:78,26,0	0/0:16,1:18:19.94:0,20,324	1/1:6,17:23:47.68:350,48,0	1/1:7,8:15:10.75:196,11,0	1/1:4,10:14:26.84:197,27,0	0/0:14,3:17:11.10:0,11,247	1/1:3,12:15:32.71:235,33,0	1/1:7,12:20:39.13:262,39,0	1/1:1,13:16:13.64:240,14,0	1/1:5,16:22:46.76:334,47,0	1/1:4,13:17:35.79:263,36,0	1/1:8,10:18:9.39:173,9,0	1/1:9,14:25:11.48:235,11,0	0/1:6,8:14:14.39:72,0,14	1/1:9,17:26:20.72:295,21,0	0/0:23,0:23:41.68:0,42,412	0/0:29,0:29:78.05:0,78,734	1/1:3,18:21:44.57:316,45,0	1/1:10,12:22:37.74:269,38,0	1/1:6,25:31:63.77:553,64,0	1/1:12,3:14:8.30:61,8,0
chr10	64972106	.	AAACAACAACAACAAC	A	15224.96	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=9.765;DP=576;FS=0.000;HRun=0;HaplotypeScore=244.9702;InbreedingCoeff=0.8860;MQ=51.52;MQ0=4;MQRankSum=-8.698;QD=39.86;ReadPosRankSum=3.451;VQSLOD=3.9610;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:32:36.12:0,36,2482	1/1:5,3:8:15.05:549,15,0	0/0:28,0:17:11.99:0,12,235	0/0:18,0:11:5.51:0,6,92	1/1:11,0:30:21.07:615,21,0	1/1:9,10:18:24.08:915,24,0	1/1:12,2:14:15.04:457,15,0	0/0:25,0:22:18.06:0,18,364	0/0:25,0:25:45.15:0,45,3082	1/1:20,6:26:36.11:1213,36,0	1/1:9,12:20:18.06:664,18,0	1/1:10,3:13:12.04:462,12,0	0/0:16,0:16:27.09:0,27,1893	1/1:7,10:17:18.06:704,18,0	1/1:7,16:23:30.10:1188,30,0	1/1:5,14:19:24.08:967,24,0	1/1:15,4:19:20.98:678,21,0	1/1:10,4:14:12.09:516,12,0	1/1:24,2:25:27.07:748,27,0	1/1:11,5:16:3.09:701,3,0	1/1:13,0:13:2.50:78,3,0	1/1:15,6:21:26.90:890,27,0	0/0:21,0:21:45.15:0,45,2722	0/0:28,0:28:51.16:0,51,3056	1/1:12,8:20:24.08:917,24,0	1/1:10,13:23:37.12:1199,37,0	1/1:17,15:32:39:1418,39,0	1/1:2,5:7:9.03:346,9,0
chr10	64972994	.	A	AAG	1146.81	PASS	AB=0.918;AC=41;AF=0.759;AN=54;BaseQRankSum=2.632;DP=466;FS=33.672;HRun=0;HaplotypeScore=98.9849;InbreedingCoeff=0.3561;MQ=67.93;MQ0=16;MQRankSum=-3.244;QD=3.62;ReadPosRankSum=-0.290;VQSLOD=0.5375;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:22:6.24:15,0,6	1/1:3,0:3:2.50:9,2,0	0/0:28,0:17:2.50:0,2,9	0/0:62,0:25:2.70:0,3,33	0/1:9,0:8:0:0,0,0	1/1:9,0:9:2.74:42,3,0	1/1:20,0:20:5.59:34,6,0	1/1:21,0:21:15.32:90,15,0	0/1:9,8:18:9.27:294,0,9	1/1:17,0:17:11.80:111,12,0	1/1:13,0:14:8.19:57,8,0	1/1:12,0:11:7.92:41,8,0	0/0:22,0:22:18.05:0,18,200	1/1:11,0:11:2.75:36,3,0	1/1:16,0:16:5.26:44,5,0	1/1:12,0:12:11.58:98,12,0	1/1:11,0:12:6.75:21,7,0	1/1:18,0:17:12.91:61,13,0	1/1:14,0:14:9.35:56,9,0	0/1:11,0:10:0.07:0,0,0	1/1:15,0:15:7.85:36,8,0	./.	0/1:10,1:12:30.84:31,0,80	0/0:25,0:24:15.04:0,15,165	1/1:12,0:11:2.60:10,3,0	1/1:15,0:14:17.20:104,17,0	1/1:13,0:13:11.11:57,11,0	1/1:8,0:8:9.54:44,10,0
chr10	64973037	.	G	GGAA	502.19	PASS	AB=0.684;AC=1;AF=0.018;AN=56;BaseQRankSum=6.475;DP=535;FS=8.445;HRun=0;HaplotypeScore=85.2617;InbreedingCoeff=-0.0309;MQ=52.22;MQ0=37;MQRankSum=-5.832;QD=19.32;ReadPosRankSum=-4.714;VQSLOD=1.1063;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:24:34.97:0,35,761	0/0:5,0:5:6.02:0,6,102	0/0:61,0:13:26.45:0,26,408	0/0:72,0:14:22.52:0,23,333	0/0:21,0:21:56.94:0,57,962	0/0:13,0:12:33.04:0,33,503	0/0:24,0:24:58.72:0,59,984	0/1:14,9:25:28.94:577,0,29	0/0:17,0:15:38.79:0,39,597	0/0:15,0:14:26.59:0,27,617	0/0:15,0:16:42.14:0,42,706	0/0:22,0:18:41.70:0,42,625	0/0:16,0:15:45.12:0,45,708	0/0:9,0:9:24.03:0,24,351	0/0:14,0:14:9.02:0,9,424	0/0:16,0:16:33.01:0,33,562	0/0:16,0:15:26.75:0,27,648	0/0:15,0:15:30.07:0,30,481	0/0:10,0:7:18.05:0,18,278	0/0:11,0:11:26.78:0,27,370	0/0:17,0:17:15.58:0,16,493	0/0:18,0:17:48.16:0,48,818	0/0:17,0:17:44.91:0,45,685	0/0:22,0:21:57.20:0,57,971	0/0:8,0:8:18.06:0,18,307	0/0:16,0:15:30.46:0,30,695	0/0:8,0:7:15:0,15,173	0/0:2,0:2:3.01:0,3,51
chr10	64973063	.	AG	A	386.93	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.436;DP=468;FS=0.942;HRun=6;HaplotypeScore=55.1002;InbreedingCoeff=0.8820;MQ=62.78;MQ0=16;MQRankSum=1.014;QD=24.18;ReadPosRankSum=0.275;VQSLOD=3.0647;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:20:51.10:0,51,649	0/0:3,0:3:6.02:0,6,79	0/0:37,0:16:27.83:0,28,329	0/0:41,1:12:22.87:0,23,253	1/1:2,14:16:45.11:482,45,0	0/0:16,0:15:45.14:0,45,578	0/0:24,0:24:63.20:0,63,827	0/0:25,0:25:47.87:0,48,327	0/0:12,0:11:26.89:0,27,342	0/0:12,0:11:33.11:0,33,434	0/0:14,0:14:39.12:0,39,500	0/0:20,0:17:45.07:0,45,560	0/0:13,0:12:36.10:0,36,459	0/0:10,0:10:30.10:0,30,395	0/0:16,0:16:42.08:0,42,519	0/0:20,0:20:54.12:0,54,674	0/0:16,0:15:42.05:0,42,529	0/0:16,0:16:42.07:0,42,492	0/0:12,0:10:27.09:0,27,355	0/0:9,0:9:27.08:0,27,341	0/0:16,0:15:36.12:0,36,474	0/0:18,0:17:45.13:0,45,574	0/0:16,0:16:45.03:0,45,536	0/0:26,0:22:66.20:0,66,852	0/0:8,0:8:21.07:0,21,276	0/0:14,0:14:42.13:0,42,546	0/0:10,0:9:27.09:0,27,353	0/0:5,0:5:15.05:0,15,197
chr10	64973356	.	AT	A	578.52	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.566;DP=609;FS=0.778;HRun=7;HaplotypeScore=61.5064;InbreedingCoeff=0.8223;MQ=75.76;MQ0=0;MQRankSum=0.095;QD=19.95;ReadPosRankSum=-3.231;VQSLOD=2.5176;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:72.19:0,72,888	0/0:6,0:6:18.06:0,18,225	0/0:14,0:14:1.88:0,2,234	0/0:20,0:20:34.39:0,34,412	0/0:27,0:27:75.24:0,75,937	0/0:18,0:18:48.15:0,48,604	0/0:16,0:16:42.12:0,42,515	1/1:6,23:29:66.14:673,66,0	0/0:21,0:21:54.17:0,54,678	0/0:25,0:25:69.22:0,69,867	0/0:17,0:17:42.13:0,42,519	0/0:28,0:28:81.72:0,82,1009	0/0:23,0:23:69.20:0,69,844	0/0:27,0:27:75.07:0,75,919	0/0:23,0:23:60.19:0,60,754	0/0:26,0:26:66.21:0,66,830	0/0:21,0:21:54.17:0,54,676	0/0:22,0:22:63.14:0,63,758	0/0:29,0:28:75.22:0,75,926	0/0:32,0:32:93.28:0,93,1148	0/0:20,0:20:60.19:0,60,755	0/0:13,0:13:36.12:0,36,453	0/0:18,0:18:51.15:0,51,629	0/0:14,0:14:39.08:0,39,472	0/0:19,0:19:51.16:0,51,641	0/0:26,0:26:66.21:0,66,826	0/0:25,0:25:66.21:0,66,830	0/0:24,0:24:72.23:0,72,906
chr10	64974093	.	C	CT	12983.84	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-14.767;DP=622;FS=3.743;HRun=7;HaplotypeScore=55.1124;InbreedingCoeff=0.9932;MQ=83.79;MQ0=0;MQRankSum=-1.077;QD=32.14;ReadPosRankSum=2.017;VQSLOD=4.8540;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:96.15:0,96,927	1/1:0,16:16:45.14:544,45,0	0/0:20,0:20:45.01:0,45,405	0/0:15,1:17:10.80:0,11,233	0/0:20,0:20:57.07:0,57,544	1/1:1,17:18:45.14:544,45,0	1/1:3,13:16:39.12:471,39,0	0/0:26,0:26:66.10:0,66,637	0/0:24,0:24:63.09:0,63,608	1/1:3,21:24:66.20:794,66,0	1/1:1,19:20:57.17:685,57,0	1/1:2,20:22:60.18:724,60,0	0/0:24,0:24:66.10:0,66,637	1/1:1,18:19:54.17:652,54,0	1/1:3,19:22:54.17:652,54,0	1/1:1,17:18:25.19:587,25,0	1/1:1,26:27:69.21:834,69,0	1/1:0,14:14:39.08:451,39,0	1/1:5,26:31:78.24:940,78,0	1/1:0,25:25:75.15:874,75,0	1/1:2,20:22:54.17:652,54,0	1/1:1,12:13:33.10:399,33,0	0/0:15,0:15:45.07:0,45,435	0/0:36,0:36:99:0,99,950	1/1:2,23:25:66.20:797,66,0	1/1:2,31:33:67.31:1080,67,0	1/1:1,29:30:81.25:978,81,0	1/1:0,9:9:27.08:326,27,0
chr10	64974641	.	CG	C	1697.89	PASS	AB=0.955;AC=42;AF=0.750;AN=56;BaseQRankSum=-0.332;DP=376;FS=4.594;HRun=2;HaplotypeScore=64.3177;InbreedingCoeff=0.7065;MQ=49.42;MQ0=25;MQRankSum=-2.105;QD=5.59;ReadPosRankSum=-0.972;VQSLOD=0.3482;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:12:16.85:0,17,71	1/1:7,0:6:11.41:70,11,0	1/1:6,0:2:2.60:10,3,0	0/1:8,1:7:0.93:1,0,37	0/0:17,0:17:31.31:0,31,177	1/1:14,2:16:10.19:154,10,0	1/1:17,0:16:17.39:97,17,0	1/1:12,0:11:24:144,24,0	0/0:8,0:8:17.25:0,17,135	1/1:10,1:9:15.52:92,16,0	1/1:18,0:16:4.17:96,4,0	1/1:8,0:7:8.04:58,8,0	0/0:10,0:9:20.94:0,21,215	0/1:13,0:12:0.79:52,0,1	1/1:7,0:8:13.73:70,14,0	1/1:9,1:7:3.12:55,3,0	1/1:26,0:23:17.99:131,18,0	1/1:19,2:17:29.25:189,29,0	1/1:10,0:9:15.78:95,16,0	1/1:14,0:14:7.99:42,8,0	1/1:12,1:12:13.92:65,14,0	1/1:16,0:15:19.90:116,20,0	0/0:11,0:11:26.63:0,27,264	0/0:9,0:8:18.02:0,18,225	1/1:17,2:19:7.57:110,8,0	1/1:18,0:18:9.81:117,10,0	1/1:18,2:19:2.50:53,2,0	1/1:10,0:6:11.09:65,11,0
chr10	64974642	.	G	GA	771.39	PASS	AB=0.813;AC=21;AF=0.375;AN=56;BaseQRankSum=1.678;DP=396;FS=14.398;HRun=0;HaplotypeScore=79.0077;InbreedingCoeff=-0.2046;MQ=50.44;MQ0=26;MQRankSum=0.305;QD=2.88;ReadPosRankSum=-0.266;VQSLOD=1.7662;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:13:30.06:0,30,392	1/1:5,4:8:5.68:33,6,0	0/0:8,0:2:2.04:0,2,6	0/0:11,0:8:6.72:0,7,48	0/0:18,0:18:33:0,33,421	0/0:16,0:16:6.01:0,6,43	0/1:11,5:15:14.77:43,0,15	0/0:15,0:11:2.95:0,3,10	0/0:10,0:10:18.02:0,18,218	0/1:8,5:12:16.50:37,0,16	0/1:16,3:17:13.40:79,0,13	1/1:4,5:8:2.37:23,2,0	0/0:11,0:10:20.94:0,21,261	0/1:14,0:13:6.64:7,0,14	0/1:6,2:8:12.94:13,0,27	0/1:9,1:7:8.80:9,0,42	0/1:15,9:22:53.14:144,0,53	0/1:12,9:18:4.61:88,0,5	0/1:9,1:10:12.39:52,0,12	0/1:10,5:15:16.63:17,0,21	1/1:4,6:9:1.99:104,2,0	0/1:14,4:17:31.36:47,0,31	0/0:12,0:12:24.41:0,24,310	0/0:9,0:8:18.02:0,18,209	0/1:17,2:19:46.44:46,0,47	0/1:10,6:16:11.72:79,0,12	0/1:10,11:20:24.06:87,0,24	0/1:11,0:7:8.63:20,0,9
chr10	64974643	.	GAAA	G	177.18	PASS	AB=0.923;AC=3;AF=0.054;AN=56;BaseQRankSum=-0.291;DP=449;FS=6.671;HRun=15;HaplotypeScore=82.9795;InbreedingCoeff=0.4693;MQ=50.01;MQ0=27;MQRankSum=1.497;QD=5.91;ReadPosRankSum=1.487;VQSLOD=-0.5152;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:13,1:17:13.54:0,14,325	0/0:8,0:8:6.02:0,6,86	0/0:10,0:3:5.84:0,6,49	0/0:12,0:8:12.25:0,12,178	1/1:4,14:18:23.72:269,24,0	0/0:17,0:17:41.91:0,42,504	0/0:16,0:15:22.53:0,23,254	0/0:30,0:20:38.77:0,39,375	0/0:8,0:10:14.99:0,15,207	0/0:15,0:14:39:0,39,531	0/0:20,0:18:32.67:0,33,475	0/0:13,0:12:15.05:0,15,218	0/1:11,1:11:6.56:7,0,373	0/0:7,0:13:11.94:0,12,137	0/0:10,0:10:21.03:0,21,307	0/0:10,0:7:18.05:0,18,278	0/0:26,0:23:42.23:0,42,604	0/0:22,0:18:21.07:0,21,299	0/0:14,0:13:2.50:0,2,376	0/0:17,0:16:36.05:0,36,544	0/0:13,0:12:18.06:0,18,255	0/0:19,0:18:36.03:0,36,500	0/0:12,0:13:18.19:0,18,308	0/0:8,0:8:21.03:0,21,335	0/0:20,0:20:54.04:0,54,777	0/0:22,0:21:47.75:0,48,600	0/0:24,0:23:44.31:0,44,620	0/0:12,0:8:12.46:0,12,136
chr10	64974775	.	G	GA	9258.70	PASS	AB=0.775;AC=44;AF=0.786;AN=56;BaseQRankSum=-6.715;DP=466;FS=5.765;HRun=9;HaplotypeScore=49.4821;InbreedingCoeff=0.7972;MQ=78.33;MQ0=1;MQRankSum=-2.935;QD=23.20;ReadPosRankSum=-0.883;VQSLOD=5.2880;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,26:29:64.73:700,65,0	1/1:2,4:6:12.03:133,12,0	0/0:15,0:13:11.44:0,11,167	0/1:14,0:14:3.38:3,0,155	1/1:3,16:19:45.12:492,45,0	1/1:1,16:17:13.06:372,13,0	1/1:7,15:22:39.11:431,39,0	1/1:5,27:33:64.36:821,64,0	0/0:14,0:14:32.47:0,32,307	1/1:3,10:13:30.08:332,30,0	1/1:5,13:18:39.06:418,39,0	1/1:3,11:14:24.06:265,24,0	0/0:16,0:16:35.97:0,36,312	1/1:9,15:24:59.74:629,60,0	1/1:2,15:18:43.19:448,43,0	0/1:2,9:11:5:178,0,5	1/1:1,12:13:30.08:332,30,0	1/1:2,15:17:39.11:431,39,0	1/1:6,14:21:44.92:459,45,0	1/1:1,21:23:66.01:711,66,0	1/1:3,10:13:27.07:299,27,0	1/1:3,14:17:36.10:398,36,0	0/0:11,0:11:26.59:0,27,234	0/0:11,0:11:32.94:0,33,279	1/1:1,13:14:36.10:398,36,0	1/1:4,11:15:33.05:345,33,0	1/1:8,19:26:57.15:628,57,0	1/1:0,1:1:3.01:33,3,0
chr10	64975054	.	TGGCTGTCAGAGCTCCG	T	1265.48	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.773;DP=701;FS=0.000;HRun=0;HaplotypeScore=319.3919;InbreedingCoeff=0.9958;MQ=88.13;MQ0=0;MQRankSum=-3.141;QD=50.62;ReadPosRankSum=-1.580;VQSLOD=2.1047;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,117,7296	0/0:15,0:15:45.15:0,45,3290	0/0:31,0:31:90.31:0,90,4892	0/0:19,0:19:51.17:0,51,2971	0/0:21,0:21:63.19:0,63,3904	0/0:20,0:20:57.20:0,57,4303	0/0:29,0:29:87.27:0,87,5704	1/1:13,12:25:36.11:1360,36,0	0/0:24,0:24:72.25:0,72,5335	0/0:24,0:24:66.22:0,66,4470	0/0:17,0:17:48.15:0,48,2533	0/0:32,0:32:96.33:0,96,7162	0/0:23,0:23:66.23:0,66,4903	0/0:21,0:21:63.22:0,63,4647	0/0:30,0:30:90.30:0,90,6647	0/0:21,0:21:63.20:0,63,4231	0/0:46,0:46:99:0,138,10580	0/0:16,0:16:48.16:0,48,3295	0/0:28,0:28:84.10:0,84,4846	0/0:18,0:18:51.13:0,51,3018	0/0:43,0:43:99:0,129,9162	0/0:19,0:19:53.85:0,54,3609	0/0:23,0:23:54.17:0,54,2528	0/0:30,0:30:87.30:0,87,6557	0/0:20,0:19:57.20:0,57,3916	0/0:25,0:25:72.24:0,72,4844	0/0:31,0:31:87.30:0,87,6546	0/0:7,0:7:21.07:0,21,1544
chr10	64975140	.	C	CT	808.14	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.910;DP=647;FS=7.931;HRun=2;HaplotypeScore=74.6188;InbreedingCoeff=0.9939;MQ=71.39;MQ0=0;MQRankSum=-2.982;QD=36.73;ReadPosRankSum=-3.347;VQSLOD=2.5025;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,117,1610	0/0:8,0:8:24.08:0,24,335	0/0:24,0:23:66.21:0,66,903	0/0:20,0:20:54.17:0,54,727	0/0:26,0:26:78.22:0,78,1060	0/0:18,0:18:54.18:0,54,753	0/0:26,0:26:75.25:0,75,1046	1/1:0,22:22:57.19:903,57,0	0/0:29,0:29:87.29:0,87,1212	0/0:25,0:25:72.20:0,72,966	0/0:12,0:12:36.12:0,36,503	0/0:25,0:25:69.23:0,69,962	0/0:20,0:20:60.20:0,60,838	0/0:24,0:24:72.24:0,72,1005	0/0:26,0:26:72.24:0,72,1001	0/0:25,0:25:75.24:0,75,1027	0/0:29,0:29:87.29:0,87,1216	0/0:21,0:21:60.20:0,60,835	0/0:29,0:29:84.26:0,84,1135	0/0:18,0:18:54.18:0,54,747	0/0:39,0:39:99:0,114,1573	0/0:20,0:20:57.19:0,57,790	0/0:21,0:21:63.21:0,63,874	0/0:26,0:26:78.26:0,78,1088	0/0:17,0:16:51.15:0,51,694	0/0:18,0:18:51.17:0,51,713	0/0:25,0:25:69.23:0,69,951	0/0:12,0:12:21.07:0,21,294
chr10	64975623	.	C	CTG	1621.09	PASS	AB=0.846;AC=12;AF=0.214;AN=56;BaseQRankSum=6.823;DP=686;FS=4.978;HRun=0;HaplotypeScore=256.7611;InbreedingCoeff=-0.2626;MQ=55.75;MQ0=8;MQRankSum=-8.992;QD=4.90;ReadPosRankSum=-7.407;VQSLOD=0.2649;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:18,0:48:99:114,0,327	0/0:12,0:12:33.11:0,33,498	0/0:38,0:26:75.22:0,75,1093	0/0:31,0:22:50.94:0,51,696	0/0:21,0:21:47.30:0,47,615	0/0:15,4:19:30.08:0,30,421	0/0:23,2:24:30.07:0,30,390	0/1:35,0:30:96.45:96,0,563	0/0:27,0:27:81.26:0,81,1210	0/1:28,6:33:99:538,0,634	0/0:18,5:23:33.08:0,33,464	0/1:19,3:22:99:113,0,293	0/0:17,0:17:48.16:0,48,731	0/1:26,4:30:2.23:2,0,683	0/1:21,10:30:74.62:75,0,352	0/1:14,9:23:99:109,0,354	0/1:22,4:26:99:105,0,687	0/1:11,4:14:99:161,0,270	0/1:23,1:22:57.32:57,0,508	0/0:23,6:29:48.09:0,48,642	0/0:18,0:18:26.94:0,27,409	0/0:19,4:23:20.99:0,21,306	0/0:19,0:19:54.16:0,54,781	0/0:20,0:20:51.15:0,51,747	0/0:17,6:23:33.48:0,33,472	0/1:27,3:29:99:290,0,796	0/1:12,1:13:99:109,0,185	0/0:8,1:9:21.07:0,21,317
chr10	64975655	.	G	GTCTGTCTC	6844.82	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=3.173;DP=677;FS=4.018;HRun=0;HaplotypeScore=327.9128;InbreedingCoeff=-0.0681;MQ=47.68;MQ0=9;MQRankSum=-3.925;QD=13.14;ReadPosRankSum=-5.782;VQSLOD=2.2708;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:41,0:41:99:908,0,101	0/1:9,0:9:50.32:50,0,61	0/0:30,0:16:32.74:0,33,508	0/0:46,0:32:39.30:0,39,615	1/1:13,5:18:24.03:567,24,0	0/1:20,0:20:7.91:155,0,8	1/1:26,0:26:18.83:279,19,0	0/1:55,0:44:24.63:544,0,25	0/0:22,0:22:63.09:0,63,1424	0/1:43,0:42:15.01:1175,0,15	0/1:21,0:21:46.51:79,0,47	1/1:20,0:20:9.64:281,10,0	0/0:21,0:21:53.83:0,54,971	0/1:22,0:22:22.36:130,0,22	0/1:30,0:28:57.16:221,0,57	0/1:20,0:20:19.67:274,0,20	0/1:19,0:19:0.11:347,0,0	1/1:11,0:10:20.96:328,21,0	1/1:21,0:20:0:407,0,0	0/1:25,0:25:40.49:85,0,40	1/1:18,0:18:8.71:79,9,0	0/1:25,0:25:58.85:89,0,59	0/0:13,0:13:33.08:0,33,730	0/0:22,0:22:56.95:0,57,838	0/1:22,0:22:91.12:97,0,91	0/1:30,0:28:99:581,0,136	1/1:16,0:16:18.64:119,19,0	0/1:9,0:9:7.85:48,0,8
chr10	64975665	.	GGT	G	141.31	PASS	AB=0.868;AC=3;AF=0.054;AN=56;BaseQRankSum=0.916;DP=642;FS=13.708;HRun=0;HaplotypeScore=273.2187;InbreedingCoeff=0.3878;MQ=52.51;MQ0=7;MQRankSum=-1.547;QD=2.28;ReadPosRankSum=-1.017;VQSLOD=0.7222;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:36.02:0,36,501	0/0:11,0:11:17.73:0,18,231	0/0:38,0:21:44.75:0,45,624	0/0:53,1:32:52.83:0,53,899	1/1:1,15:16:3.01:39,3,0	0/0:16,0:16:26.59:0,27,415	0/0:18,0:18:30.18:0,30,477	0/1:39,7:35:99:194,0,615	0/0:23,0:23:60.21:0,60,1017	0/0:42,0:42:95.77:0,96,1400	0/0:20,0:20:9.91:0,10,156	0/0:18,0:18:24.32:0,24,347	0/0:25,1:26:20.80:0,21,785	0/0:21,0:21:18.51:0,19,309	0/0:25,0:24:23.43:0,23,364	0/0:19,0:19:31.92:0,32,489	0/0:15,0:15:18.20:0,18,236	0/0:9,0:8:14.98:0,15,223	0/0:13,0:13:23.95:0,24,276	0/0:22,0:22:20.78:0,21,314	0/0:17,0:17:8.99:0,9,124	0/0:23,0:23:16.46:0,16,258	0/0:13,0:13:24.08:0,24,411	0/0:21,0:21:51.09:0,51,800	0/0:20,0:20:9.68:0,10,111	0/0:30,0:28:61.39:0,61,839	0/0:16,0:16:20.92:0,21,355	0/0:7,0:7:13.24:0,13,177
chr10	64975687	.	A	ACT	4569.88	PASS	AB=0.969;AC=30;AF=0.556;AN=54;BaseQRankSum=2.684;DP=691;FS=3.156;HRun=0;HaplotypeScore=245.9674;InbreedingCoeff=0.0005;MQ=53.80;MQ0=25;MQRankSum=0.200;QD=9.23;ReadPosRankSum=1.235;VQSLOD=4.0990;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:40,1:41:15.94:674,0,16	0/1:11,1:12:22.50:129,0,22	0/0:66,0:20:7.16:0,7,109	0/1:71,0:33:8.46:8,0,144	./.	0/1:15,1:15:19.91:171,0,20	0/1:24,0:22:76.29:368,0,76	0/0:23,0:18:8.52:0,9,42	0/0:21,0:21:35.51:0,36,344	0/1:45,0:48:33.60:582,0,34	1/1:15,2:17:5.89:86,6,0	0/1:17,0:17:8.78:259,0,9	0/0:20,0:24:47.69:0,48,471	1/1:22,2:23:7.67:180,8,0	1/1:23,3:25:12.04:186,12,0	0/1:18,1:18:16.61:216,0,17	1/1:14,1:15:9.47:116,9,0	0/1:8,0:8:22.94:129,0,23	1/1:15,2:16:21.07:329,21,0	1/1:17,4:19:3.01:47,3,0	0/1:21,0:21:37.91:38,0,61	0/1:27,3:30:11.29:281,0,11	0/0:17,0:17:19.78:0,20,214	0/0:26,0:25:56.96:0,57,626	0/1:19,1:20:27.48:41,0,27	1/1:25,3:28:1.01:383,1,0	1/1:12,2:14:18.02:253,18,0	1/1:5,1:4:6.02:93,6,0
chr10	64975692	.	C	CTC	4451.67	PASS	AB=0.968;AC=30;AF=0.556;AN=54;BaseQRankSum=2.961;DP=691;FS=3.161;HRun=0;HaplotypeScore=230.0125;InbreedingCoeff=0.0039;MQ=50.83;MQ0=36;MQRankSum=-0.009;QD=9.10;ReadPosRankSum=1.059;VQSLOD=4.2422;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:43,0:42:15.94:674,0,16	0/1:12,0:12:22.50:129,0,22	0/0:64,0:18:7.16:0,7,109	0/1:65,0:27:8.46:8,0,144	./.	0/1:17,0:16:19.91:171,0,20	0/1:22,0:19:76.29:368,0,76	0/0:26,0:19:11.49:0,11,61	0/0:21,0:21:35.60:0,36,345	0/1:45,0:46:39.41:556,0,39	1/1:15,0:15:5.89:86,6,0	0/1:18,0:15:8.80:259,0,9	0/0:23,0:23:47.69:0,48,471	1/1:24,0:22:7.67:180,8,0	1/1:25,0:24:12.04:186,12,0	0/1:18,0:16:16.61:216,0,17	1/1:14,0:15:9.94:117,10,0	0/1:11,0:9:22.94:129,0,23	1/1:17,0:16:15.05:235,15,0	1/1:21,0:19:3.01:47,3,0	0/1:9,11:21:37.91:38,0,61	0/1:28,0:28:11.49:281,0,11	0/0:19,0:17:19.78:0,20,214	0/0:30,0:28:56.96:0,57,626	0/1:20,0:19:27.48:41,0,27	1/1:28,0:28:1.01:383,1,0	1/1:14,0:14:18.02:253,18,0	1/1:8,0:5:6.02:93,6,0
chr10	64976961	.	A	AT	990.89	PASS	AB=0.658;AC=1;AF=0.018;AN=56;BaseQRankSum=2.173;DP=558;FS=2.222;HRun=2;HaplotypeScore=188.8867;InbreedingCoeff=-0.0276;MQ=56.86;MQ0=6;MQRankSum=-4.511;QD=20.64;ReadPosRankSum=-2.197;VQSLOD=2.9051;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:34:86.60:0,87,808	0/0:6,0:6:8.97:0,9,70	0/0:17,0:8:14.85:0,15,168	0/0:23,0:17:39:0,39,441	0/0:22,0:21:53.56:0,54,509	0/0:21,0:21:41.71:0,42,328	0/0:16,0:15:17.97:0,18,164	0/1:17,25:44:54.51:1065,0,55	0/0:15,0:15:36.41:0,36,433	0/0:30,0:30:80.87:0,81,752	0/0:14,0:14:20.94:0,21,175	0/0:13,0:13:24.42:0,24,205	0/0:23,0:23:59.91:0,60,706	0/0:17,0:17:24.66:0,25,182	0/0:15,0:15:8.48:0,8,55	0/0:23,0:23:31.94:0,32,245	0/0:20,0:20:42:0,42,401	0/0:15,0:15:9.42:0,9,286	0/0:11,0:9:20.92:0,21,167	0/0:25,0:25:36.94:0,37,357	0/0:18,0:17:17.96:0,18,143	0/0:12,0:12:12.44:0,12,97	0/0:23,0:23:57.16:0,57,688	0/0:22,0:21:51.05:0,51,625	0/0:20,0:20:20.99:0,21,138	0/0:22,0:22:65.79:0,66,549	0/0:25,0:23:43.34:0,43,397	0/0:7,0:6:18.01:0,18,170
chr10	64976966	.	ATGTGTGTGTGTGTGTGTGTGTGTGTG	A	12794.56	PASS	AB=0.909;AC=29;AF=0.580;AN=50;BaseQRankSum=10.308;DP=553;FS=4.425;HRun=0;HaplotypeScore=367.9029;InbreedingCoeff=0.6619;MQ=54.54;MQ0=16;MQRankSum=-8.062;QD=44.58;ReadPosRankSum=-2.366;VQSLOD=2.5087;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:41:54.11:0,54,5318	1/1:4,3:7:3.48:184,3,0	0/0:15,0:6:2.97:0,3,150	0/0:21,0:15:0.47:0,0,1	0/0:23,0:22:48.16:0,48,3664	1/1:14,5:20:18.06:1004,18,0	./.	0/0:47,0:42:41.63:0,42,1868	0/0:14,0:15:14.08:0,14,750	1/1:16,10:26:24.03:1154,24,0	1/1:9,3:12:6.02:382,6,0	1/1:10,2:12:6.02:378,6,0	0/0:22,0:22:51.14:0,51,3911	1/1:9,8:17:18.53:1132,19,0	1/1:4,10:14:21.07:1172,21,0	1/1:12,11:23:21.07:1367,21,0	0/1:16,5:20:87.09:746,0,87	0/1:15,1:14:65.12:197,0,65	./.	1/1:17,6:23:14.85:767,15,0	0/1:18,0:17:0:0,0,0	1/1:5,6:11:6.02:252,6,0	0/0:21,0:22:42.14:0,42,3726	0/0:20,0:22:39.13:0,39,4297	1/1:9,10:19:26.92:1685,27,0	1/1:17,4:20:12.02:487,12,0	1/1:12,13:23:30.10:1891,30,0	./.
chr10	64976969	.	TG	T	173.29	PASS	AB=0.711;AC=1;AF=0.018;AN=56;BaseQRankSum=5.854;DP=529;FS=7.202;HRun=1;HaplotypeScore=183.5073;InbreedingCoeff=-0.0342;MQ=52.62;MQ0=18;MQRankSum=-5.608;QD=5.42;ReadPosRankSum=1.617;VQSLOD=0.3564;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:43:84.09:0,84,1036	0/0:7,0:7:8.66:0,9,101	0/0:15,0:6:12.03:0,12,141	0/0:18,0:13:30.38:0,30,320	0/0:23,0:21:60.19:0,60,791	0/0:20,0:19:33.10:0,33,395	0/0:15,0:14:15.05:0,15,183	0/1:19,13:27:99:248,0,306	0/0:16,0:15:31.28:0,31,415	0/0:25,0:25:50.46:0,50,578	0/0:12,0:12:15.05:0,15,183	0/0:12,0:12:21.05:0,21,239	0/0:23,0:23:59.53:0,60,743	0/0:17,0:17:20.76:0,21,216	0/0:14,0:14:3.01:0,3,37	0/0:23,0:23:21.54:0,22,258	0/0:22,0:20:20.13:0,20,318	0/0:16,0:14:33.51:0,34,373	0/0:9,0:7:15.05:0,15,183	0/0:19,0:19:18.04:0,18,203	0/0:15,0:14:15.05:0,15,183	0/0:11,0:11:9.01:0,9,96	0/0:25,0:24:61.58:0,62,754	0/0:24,0:23:55.63:0,56,785	0/0:19,0:19:15.05:0,15,185	0/0:20,0:19:52.09:0,52,613	0/0:24,0:22:28.50:0,28,332	0/0:7,0:5:15.05:0,15,183
chr10	64977245	.	C	CTTT	5315.82	PASS	AB=0.651;AC=41;AF=0.732;AN=56;BaseQRankSum=1.058;DP=503;FS=0.000;HRun=13;HaplotypeScore=97.4908;InbreedingCoeff=0.6802;MQ=75.77;MQ0=2;MQRankSum=-0.365;QD=13.29;ReadPosRankSum=0.658;VQSLOD=3.1366;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:12,0:32:15.59:160,16,0	1/1:3,2:6:9:101,9,0	0/0:25,0:17:6.74:0,7,97	0/0:18,0:15:6.89:0,7,95	0/1:9,0:22:6.12:65,0,6	1/1:3,2:25:41.89:382,42,0	1/1:3,1:12:17.96:170,18,0	0/1:7,0:24:3.64:72,0,4	0/0:9,0:11:16.31:0,16,153	1/1:5,1:25:49.39:400,49,0	1/1:4,2:21:42.55:359,43,0	1/1:6,0:16:32.85:249,33,0	0/0:13,0:13:23.78:0,24,224	1/1:2,0:8:11.95:91,12,0	1/1:9,0:15:41.69:387,42,0	1/1:3,0:17:33.80:246,34,0	1/1:6,1:21:42.97:347,43,0	1/1:2,0:10:17.43:120,17,0	0/1:11,0:16:14.41:178,0,14	1/1:7,3:29:55.75:481,56,0	1/1:2,0:14:16.19:117,16,0	1/1:2,0:10:20.88:157,21,0	0/0:23,0:25:56.79:0,57,576	0/0:6,0:7:14.82:0,15,130	1/1:6,1:26:32.90:285,33,0	1/1:2,1:19:49.10:405,49,0	1/1:6,2:27:56.81:529,57,0	1/1:3,0:4:2.84:14,3,0
chr10	64979398	.	C	CTTT	666.99	PASS	AB=0.537;AC=3;AF=0.054;AN=56;BaseQRankSum=-0.075;DP=590;FS=11.096;HRun=10;HaplotypeScore=131.2066;InbreedingCoeff=0.6373;MQ=72.57;MQ0=1;MQRankSum=-0.832;QD=12.83;ReadPosRankSum=-2.933;VQSLOD=-0.1531;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:40:64.15:0,64,1012	0/0:8,0:8:21.06:0,21,255	0/0:17,0:16:39.08:0,39,437	0/0:12,0:13:14.47:0,14,136	0/1:3,0:22:24.33:24,0,45	0/0:23,0:23:57.10:0,57,686	0/0:17,0:17:33.06:0,33,401	1/1:14,4:28:54.13:749,54,0	0/0:23,0:23:60.15:0,60,730	0/0:22,0:23:63.08:0,63,769	0/0:21,0:21:60.13:0,60,718	0/0:23,0:24:57.02:0,57,653	0/0:13,0:13:30.04:0,30,364	0/0:15,0:16:32.79:0,33,382	0/0:16,0:16:36.08:0,36,438	0/0:20,0:20:45.09:0,45,535	0/0:28,0:28:69.21:0,69,839	0/0:21,0:22:45.01:0,45,527	0/0:16,0:16:29.99:0,30,343	0/0:28,0:29:61.54:0,62,808	0/0:17,0:17:30:0,30,365	0/0:20,0:20:42.03:0,42,515	0/0:28,0:29:76.54:0,77,920	0/0:14,0:14:39.11:0,39,474	0/0:17,0:17:33.08:0,33,401	0/0:24,0:24:60.06:0,60,702	0/0:35,0:35:81.18:0,81,971	0/0:11,0:13:32.94:0,33,364
chr10	64979440	.	T	TTTTG	20379.78	PASS	AB=0.537;AC=37;AF=0.661;AN=56;BaseQRankSum=8.189;DP=636;FS=0.738;HRun=0;HaplotypeScore=123.7801;InbreedingCoeff=0.9342;MQ=64.30;MQ0=0;MQRankSum=-7.882;QD=47.51;ReadPosRankSum=4.693;VQSLOD=5.6176;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:87.20:0,87,1334	1/1:2,9:11:21.07:483,21,0	0/0:22,0:20:39.02:0,39,550	0/0:15,0:14:30.05:0,30,445	0/0:25,0:25:72.18:0,72,1055	1/1:4,19:23:54.18:1335,54,0	1/1:3,13:18:21.07:496,21,0	0/0:22,0:22:42.14:0,42,690	0/0:23,0:23:60.16:0,60,920	1/1:7,19:28:69.15:1411,69,0	1/1:3,29:34:90.30:1991,90,0	1/1:3,16:21:44.82:1037,45,0	0/0:18,0:18:51.15:0,51,783	1/1:4,11:19:33.10:764,33,0	1/1:0,16:18:33.11:811,33,0	0/1:3,19:22:6.01:994,0,6	1/1:4,19:24:42.14:1042,42,0	1/1:4,16:20:37.01:868,37,0	1/1:5,9:18:33.04:567,33,0	1/1:5,25:32:75.08:1601,75,0	1/1:3,15:18:36.12:814,36,0	1/1:1,19:22:53.99:1212,54,0	0/0:26,0:26:48.16:0,48,791	0/0:23,0:23:54.16:0,54,840	1/1:3,19:22:42.14:1016,42,0	1/1:6,25:31:66.20:1483,66,0	1/1:1,35:37:75.26:1858,75,0	1/1:2,8:11:24.08:596,24,0
chr10	64979682	.	TAG	T	792.23	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.624;DP=613;FS=4.149;HRun=0;HaplotypeScore=71.4421;InbreedingCoeff=0.9871;MQ=83.45;MQ0=0;MQRankSum=-4.156;QD=27.32;ReadPosRankSum=-4.042;VQSLOD=3.5108;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,136,2560	0/0:7,0:7:21.06:0,21,373	0/0:25,0:25:75.26:0,75,1394	0/0:18,0:18:48.11:0,48,845	0/0:17,0:17:51.15:0,51,918	0/0:21,0:21:60.21:0,60,1136	0/0:34,0:34:99:0,99,1826	1/1:6,23:28:66.19:887,66,0	0/0:23,0:23:69.22:0,69,1280	0/0:22,0:22:66.22:0,66,1209	0/0:20,0:20:59.22:0,59,1064	0/0:29,0:29:87.28:0,87,1636	0/0:16,0:16:45.14:0,45,829	0/0:16,0:16:45.15:0,45,859	0/0:25,0:25:69.21:0,69,1239	0/0:17,0:17:45.15:0,45,869	0/0:35,0:35:99:0,105,2015	0/0:17,0:17:48.12:0,48,857	0/0:22,0:22:63.22:0,63,1216	0/0:18,0:18:54.19:0,54,1043	0/0:20,0:20:60.15:0,60,1057	0/0:11,0:11:27.09:0,27,521	0/0:20,0:20:60.21:0,60,1143	0/0:23,0:23:69.21:0,69,1242	0/0:22,0:22:57.18:0,57,1055	0/0:25,0:25:72.24:0,72,1349	0/0:27,0:27:81.28:0,81,1539	0/0:6,0:6:18.06:0,18,347
chr10	64979846	.	AT	A	558.27	PASS	AB=0.875;AC=3;AF=0.054;AN=56;BaseQRankSum=7.889;DP=578;FS=3.581;HRun=9;HaplotypeScore=57.0340;InbreedingCoeff=0.6842;MQ=66.31;MQ0=0;MQRankSum=0.323;QD=15.51;ReadPosRankSum=-3.807;VQSLOD=2.9666;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:81.12:0,81,895	0/0:11,0:11:30.09:0,30,346	0/1:6,1:7:5.11:5,0,149	0/0:6,0:6:0:0,0,0	0/0:40,1:41:92.90:0,93,1322	0/0:23,0:23:60.14:0,60,671	0/0:11,0:11:27.07:0,27,302	1/1:5,24:29:71.91:652,72,0	0/0:18,0:18:48.12:0,48,537	0/0:21,0:21:60.12:0,60,663	0/0:29,0:29:78.22:0,78,892	0/0:24,0:24:66.18:0,66,752	0/0:13,0:13:36.11:0,36,416	0/0:12,0:12:30.06:0,30,320	0/0:17,0:17:48.11:0,48,525	0/0:15,0:15:39.09:0,39,432	0/0:34,0:34:99:0,99,1132	0/0:31,0:31:87.19:0,87,975	0/0:27,0:27:53.70:0,54,809	0/0:35,0:35:90.18:0,90,1004	0/0:11,0:11:27.07:0,27,302	0/0:13,0:13:33.10:0,33,379	0/0:15,0:15:42.12:0,42,485	0/0:18,0:18:45.13:0,45,519	0/0:26,0:26:47.96:0,48,804	0/0:29,0:29:75.22:0,75,866	0/0:27,0:27:81.18:0,81,898	0/0:7,0:7:21.06:0,21,242
chr10	64980142	.	TG	T	12880.31	PASS	AB=1.000;AC=39;AF=0.696;AN=56;BaseQRankSum=18.361;DP=617;FS=2.660;HRun=1;HaplotypeScore=108.9145;InbreedingCoeff=0.9138;MQ=72.50;MQ0=0;MQRankSum=-2.592;QD=32.44;ReadPosRankSum=4.125;VQSLOD=4.6684;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,108,1652	1/1:1,7:8:21.07:273,21,0	0/0:25,0:26:60.24:0,60,1056	0/0:38,0:38:99:0,103,1592	0/0:31,0:31:93.29:0,93,1438	1/1:1,22:22:57.05:714,57,0	1/1:0,29:29:81.26:1049,81,0	0/1:29,0:27:69.47:69,0,757	0/0:25,0:25:75.24:0,75,1172	1/1:1,19:20:54.10:667,54,0	1/1:0,14:14:42.14:545,42,0	1/1:1,17:17:42.07:524,42,0	0/0:18,0:18:54.15:0,54,800	1/1:1,22:23:63.18:800,63,0	1/1:0,21:21:54.18:701,54,0	1/1:0,13:12:27.50:385,27,0	1/1:0,33:33:90.29:1168,90,0	1/1:0,27:27:75.24:973,75,0	1/1:0,8:8:24.08:308,24,0	1/1:0,17:17:48.02:580,48,0	1/1:0,28:28:72.23:933,72,0	1/1:0,9:9:21.07:273,21,0	0/0:15,0:15:42.13:0,42,635	0/0:29,0:29:63.25:0,63,1202	1/1:0,20:20:60.20:779,60,0	1/1:0,16:16:48.16:622,48,0	1/1:1,23:24:69.22:893,69,0	1/1:0,17:17:51.10:625,51,0
chr10	64980143	.	GC	G	13046.14	PASS	AB=0.763;AC=39;AF=0.696;AN=56;BaseQRankSum=18.459;DP=611;FS=1.386;HRun=1;HaplotypeScore=107.3511;InbreedingCoeff=0.9138;MQ=72.67;MQ0=0;MQRankSum=-3.180;QD=33.20;ReadPosRankSum=4.102;VQSLOD=4.6260;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,111,1738	1/1:7,0:7:21.07:273,21,0	0/0:26,0:26:57.64:0,58,1043	0/0:37,0:37:99:0,103,1556	0/0:30,0:30:90.31:0,90,1435	1/1:23,0:22:57.05:714,57,0	1/1:29,0:29:81.26:1049,81,0	0/1:20,9:27:99:235,0,693	0/0:25,0:25:75.26:0,75,1187	1/1:19,0:19:54.10:667,54,0	1/1:14,0:14:42.14:545,42,0	1/1:17,0:16:42.07:524,42,0	0/0:18,0:18:54.17:0,54,826	1/1:23,0:23:63.18:800,63,0	1/1:21,0:21:54.18:701,54,0	1/1:13,0:12:27.50:385,27,0	1/1:33,0:33:90.29:1168,90,0	1/1:27,0:27:75.24:973,75,0	1/1:8,0:8:24.08:308,24,0	1/1:17,0:17:48.02:580,48,0	1/1:28,0:28:72.23:933,72,0	1/1:9,0:9:21.07:273,21,0	0/0:14,0:14:42.14:0,42,654	0/0:28,1:29:42.36:0,42,1226	1/1:20,0:20:60.20:779,60,0	1/1:16,0:16:48.16:622,48,0	1/1:23,0:23:69.22:893,69,0	1/1:17,0:17:51.10:625,51,0
chr10	64980219	.	G	GA	759.82	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-4.238;DP=600;FS=11.311;HRun=6;HaplotypeScore=120.0404;InbreedingCoeff=0.9325;MQ=64.37;MQ0=3;MQRankSum=0.452;QD=27.14;ReadPosRankSum=-4.984;VQSLOD=0.9369;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:92.23:0,92,919	0/0:7,0:7:21.05:0,21,213	0/0:27,0:14:8.79:0,9,209	0/0:56,0:34:42.41:0,42,601	0/0:36,0:36:96.18:0,96,963	0/0:15,0:15:33.07:0,33,337	0/0:23,0:23:60.11:0,60,603	1/1:4,24:28:45.69:855,46,0	0/0:18,0:18:51.11:0,51,520	0/0:30,0:30:72.15:0,72,730	0/0:24,0:24:54.11:0,54,549	0/0:19,0:19:45.08:0,45,449	0/0:24,0:24:69.14:0,69,697	0/0:14,0:14:33.05:0,33,328	0/0:17,0:17:42.10:0,42,429	0/0:15,0:15:39.02:0,39,387	0/0:20,0:20:51.12:0,51,523	0/0:20,0:20:42.10:0,42,428	0/0:14,0:14:36.04:0,36,356	0/0:14,0:14:42.09:0,42,428	0/0:12,0:12:30.07:0,30,306	0/0:19,0:19:51.12:0,51,520	0/0:22,0:22:66.12:0,66,664	0/0:31,0:31:90.20:0,90,918	0/0:19,0:19:51.11:0,51,518	0/0:18,0:18:46.88:0,47,452	0/0:13,0:13:24.01:0,24,234	0/0:7,0:7:21.03:0,21,207
chr10	64980262	.	AAGG	A	1012.03	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-2.246;DP=555;FS=9.943;HRun=0;HaplotypeScore=149.6731;InbreedingCoeff=0.7797;MQ=52.25;MQ0=17;MQRankSum=5.062;QD=24.10;ReadPosRankSum=-0.294;VQSLOD=3.1307;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:81.30:0,81,1755	0/0:6,0:5:12.20:0,12,98	0/0:28,0:8:8.15:0,8,188	0/0:46,0:17:21.04:0,21,341	1/1:7,35:42:89.84:1107,90,0	0/0:15,0:16:34.06:0,34,335	0/0:21,0:21:52.84:0,53,612	0/0:18,0:17:18.89:0,19,178	0/0:19,0:19:57.09:0,57,1027	0/0:26,0:27:66.41:0,66,766	0/0:21,0:22:49.36:0,49,500	0/0:19,0:18:28.84:0,29,375	0/0:17,0:17:51.13:0,51,902	0/0:16,0:14:20.97:0,21,405	0/0:17,0:16:26.77:0,27,376	0/0:12,0:12:32.24:0,32,371	0/0:15,0:15:29.28:0,29,350	0/0:11,0:12:20.91:0,21,268	0/0:12,0:12:20.30:0,20,263	0/0:9,0:9:14.26:0,14,195	0/0:11,0:11:17.69:0,18,175	0/0:23,0:22:61.79:0,62,705	0/0:27,0:26:66.10:0,66,1277	0/0:26,0:26:66.16:0,66,1218	0/0:17,0:17:49.36:0,49,493	0/0:20,0:20:57.87:0,58,706	0/0:11,0:11:28.17:0,28,309	0/0:5,0:4:5.07:0,5,67
chr10	64980287	.	AGGT	A	7182.84	PASS	AB=0.827;AC=37;AF=0.661;AN=56;BaseQRankSum=9.333;DP=580;FS=5.765;HRun=0;HaplotypeScore=157.5725;InbreedingCoeff=0.7610;MQ=39.02;MQ0=30;MQRankSum=-12.137;QD=19.95;ReadPosRankSum=-6.355;VQSLOD=3.0233;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:84.14:0,84,1754	1/1:5,3:8:23.85:236,24,0	0/0:34,0:5:11.99:0,12,108	0/0:36,0:6:14.84:0,15,194	0/0:29,0:29:78.05:0,78,819	1/1:14,8:21:44.64:452,45,0	1/1:15,7:22:29.72:387,30,0	0/1:11,0:9:2.85:3,0,29	0/0:20,0:20:60.06:0,60,1142	1/1:22,7:29:75.91:785,76,0	1/1:21,3:23:43.83:444,44,0	1/1:16,7:22:43.68:508,44,0	0/0:12,0:12:33.10:0,33,691	1/1:13,9:19:48.63:492,49,0	0/1:13,7:18:28.69:301,0,29	0/1:11,6:16:27.93:420,0,28	1/1:14,0:13:20.86:217,21,0	1/1:8,0:8:12.49:139,12,0	1/1:16,4:14:32.80:320,33,0	1/1:9,3:11:17.82:176,18,0	1/1:15,6:20:33.09:287,33,0	1/1:15,8:22:17.61:541,18,0	0/0:26,0:25:75.16:0,75,1588	0/0:24,0:24:72.10:0,72,1440	1/1:14,5:18:45.17:506,45,0	1/1:12,7:19:38.41:448,38,0	1/1:10,5:14:6.47:290,6,0	1/1:4,5:8:20.95:230,21,0
chr10	64980312	.	AGAG	A	4442.46	PASS	AB=0.694;AC=25;AF=0.446;AN=56;BaseQRankSum=4.326;DP=544;FS=10.013;HRun=0;HaplotypeScore=154.2325;InbreedingCoeff=0.0501;MQ=50.52;MQ0=24;MQRankSum=-7.711;QD=13.75;ReadPosRankSum=-1.164;VQSLOD=3.9583;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:81.25:0,81,1550	1/1:5,4:8:9.03:132,9,0	0/0:31,0:13:32.79:0,33,477	0/0:31,1:15:29.71:0,30,550	0/0:30,0:30:66.21:0,66,1248	0/1:13,10:20:3.90:382,0,4	0/1:10,9:18:16.44:253,0,16	0/0:12,0:11:18.78:0,19,128	0/0:23,0:23:60.17:0,60,1101	0/1:16,5:20:64.82:318,0,65	0/1:17,6:21:28.95:216,0,29	0/1:7,13:18:4.45:392,0,4	0/0:11,0:11:27.08:0,27,473	1/1:13,10:19:1.03:220,1,0	0/1:8,8:14:47.27:234,0,47	0/1:4,9:12:58.19:195,0,58	1/1:10,3:12:4.78:177,5,0	0/1:5,4:9:24.29:133,0,24	0/1:9,8:14:20.27:308,0,20	1/1:5,7:11:21:262,21,0	0/1:9,13:21:4.63:119,0,5	1/1:21,6:22:9.94:282,10,0	0/0:22,0:21:45.15:0,45,894	0/0:25,0:25:66.23:0,66,1336	0/1:12,6:18:11.16:244,0,11	0/1:10,5:15:99:291,0,138	0/1:7,6:12:99:156,0,114	1/1:5,5:10:8.08:130,8,0
chr10	64980630	.	T	TGGA	2576.11	PASS	AB=0.982;AC=26;AF=0.464;AN=56;BaseQRankSum=18.580;DP=566;FS=3.778;HRun=0;HaplotypeScore=192.0318;InbreedingCoeff=-0.0033;MQ=64.71;MQ0=0;MQRankSum=-16.923;QD=6.94;ReadPosRankSum=4.161;VQSLOD=2.9204;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,102,1756	1/1:6,0:6:13.77:64,14,0	0/0:22,0:21:48.14:0,48,794	0/0:16,0:15:26.71:0,27,403	0/0:33,0:33:99:0,99,1673	0/1:29,0:29:22.51:160,0,23	1/1:15,0:15:20.06:110,20,0	0/1:17,9:25:99:392,0,163	0/0:24,0:24:72.23:0,72,1297	0/1:30,0:30:99:160,0,168	0/1:12,0:12:36.88:73,0,37	1/1:17,0:17:19.94:176,20,0	0/0:18,0:18:51.14:0,51,876	0/1:18,0:18:45.63:129,0,46	0/1:23,0:23:10.98:185,0,11	0/1:15,0:15:35.78:98,0,36	0/1:15,0:15:50.28:50,0,214	0/1:13,0:13:59.68:60,0,60	0/1:15,0:15:66.77:67,0,134	0/1:20,0:20:83.05:113,0,83	0/1:9,0:9:28.96:29,0,59	0/1:18,0:18:20.72:137,0,21	0/0:25,0:25:75.23:0,75,1324	0/0:22,0:22:66.19:0,66,1156	0/1:19,0:19:47.49:116,0,47	1/1:27,0:27:38.69:259,39,0	1/1:35,0:34:42.10:275,42,0	1/1:9,0:9:24.65:111,25,0
chr10	64980634	.	A	AGAAACGG	35502.31	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=4.154;DP=615;FS=7.033;HRun=0;HaplotypeScore=149.0072;InbreedingCoeff=0.9986;MQ=65.04;MQ0=0;MQRankSum=-16.832;QD=83.53;ReadPosRankSum=-1.573;VQSLOD=4.8188;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:96.33:0,96,2363	1/1:2,6:8:21.07:759,21,0	0/0:22,0:21:57.19:0,57,1232	0/0:19,0:18:37.77:0,38,788	0/0:30,0:30:90.31:0,90,2283	1/1:2,25:29:54.18:2056,54,0	1/1:3,13:19:39.10:1294,39,0	1/1:25,0:34:92.85:1617,93,0	0/0:23,0:23:69.24:0,69,1742	1/1:3,26:33:93.23:3169,93,0	1/1:5,9:14:30.10:1143,30,0	1/1:4,15:20:54.19:1970,54,0	0/0:16,0:16:48.16:0,48,1205	1/1:5,13:19:45.15:1672,45,0	1/1:2,21:23:57.19:2227,57,0	1/1:1,12:14:36.12:1404,36,0	1/1:12,7:19:36.12:1176,36,0	1/1:3,10:13:30.10:1149,30,0	1/1:9,12:21:63.22:2119,63,0	1/1:3,15:20:54.14:1713,54,0	1/1:3,8:12:24.08:771,24,0	1/1:3,16:20:51.17:1861,51,0	0/0:25,0:25:72.23:0,72,1792	0/0:21,0:21:63.22:0,63,1539	1/1:6,14:22:45.15:1655,45,0	1/1:3,27:30:87.26:3189,87,0	1/1:9,33:41:93.32:3447,93,0	1/1:1,9:10:30.10:1110,30,0
chr10	64981232	.	C	CT	21452.34	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-16.955;DP=799;FS=5.546;HRun=1;HaplotypeScore=72.8656;InbreedingCoeff=0.9800;MQ=90.14;MQ0=0;MQRankSum=-4.851;QD=40.55;ReadPosRankSum=0.633;VQSLOD=5.3718;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,147,1894	1/1:0,6:6:15.05:225,15,0	0/0:34,0:34:50.07:0,50,1083	0/0:28,0:28:72.06:0,72,901	0/0:37,0:37:99:0,108,1386	1/1:0,23:23:63.21:944,63,0	1/1:1,26:27:75.25:1124,75,0	1/1:0,35:35:99:1431,99,0	0/0:28,0:28:80.44:0,80,990	1/1:1,35:36:99:1508,102,0	1/1:0,21:21:60.16:874,60,0	1/1:2,19:21:54.18:807,54,0	0/0:24,0:24:66.21:0,66,856	1/1:0,27:27:75.25:1124,75,0	1/1:0,24:24:69.23:1034,69,0	1/1:0,25:25:72.24:1079,72,0	1/1:1,44:45:99:1754,117,0	1/1:1,25:26:72.24:1079,72,0	1/1:0,28:28:84.27:1229,84,0	1/1:2,22:24:60.20:899,60,0	1/1:5,40:45:99:1574,105,0	1/1:0,28:28:75.25:1124,75,0	0/0:20,0:20:60.18:0,60,764	0/0:49,0:49:99:0,147,1906	1/1:0,30:30:84.28:1259,84,0	1/1:0,35:35:99:1530,105,0	1/1:2,19:21:51.17:765,51,0	1/1:0,2:2:6.02:90,6,0
chr10	64981812	.	GTCTC	G	1213.76	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.834;DP=550;FS=3.854;HRun=0;HaplotypeScore=94.4868;InbreedingCoeff=0.9724;MQ=80.51;MQ0=0;MQRankSum=-5.042;QD=48.55;ReadPosRankSum=-3.213;VQSLOD=3.4841;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:78.25:0,78,2192	0/0:8,0:8:24.05:0,24,565	0/0:16,0:16:30.95:0,31,681	0/0:18,0:18:14.63:0,15,690	0/0:14,0:14:42.14:0,42,1214	0/0:16,0:16:48.16:0,48,1360	0/0:26,0:26:78.27:0,78,2240	1/1:0,25:25:72.14:1309,72,0	0/0:23,0:23:69.24:0,69,1947	0/0:18,0:18:54.19:0,54,1549	0/0:14,0:14:39.13:0,39,1129	0/0:19,0:19:57.20:0,57,1641	0/0:21,0:21:63.20:0,63,1761	0/0:16,0:16:48.16:0,48,1390	0/0:19,0:19:54.16:0,54,1472	0/0:20,0:20:60.21:0,60,1728	0/0:25,0:25:72.25:0,72,1943	0/0:10,0:10:30.10:0,30,869	0/0:21,0:21:63.19:0,63,1690	0/0:25,0:25:72.25:0,72,2047	0/0:27,0:27:78.24:0,78,2175	0/0:26,0:26:78.27:0,78,2211	0/0:19,0:19:57.20:0,57,1624	0/0:27,0:27:81.25:0,81,2208	0/0:20,0:20:60.18:0,60,1633	0/0:28,0:28:84.27:0,84,2310	0/0:17,0:16:51.18:0,51,1444	0/0:6,0:6:18.06:0,18,521
chr10	64983139	.	TCCTTCCTC	T	14242.91	PASS	AB=1.000;AC=41;AF=0.732;AN=56;BaseQRankSum=2.437;DP=407;FS=10.117;HRun=0;HaplotypeScore=120.8648;InbreedingCoeff=0.6945;MQ=49.32;MQ0=6;MQRankSum=-6.936;QD=43.42;ReadPosRankSum=0.780;VQSLOD=4.0796;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:20,0:18:84.09:84,0,148	1/1:4,5:8:15.05:408,15,0	0/0:10,0:4:11.73:0,12,125	0/0:13,0:6:8.95:0,9,138	0/1:16,0:16:62.06:62,0,729	1/1:8,10:17:47.95:917,48,0	1/1:6,1:7:18.03:255,18,0	0/1:14,0:13:24.43:49,0,24	0/0:9,0:9:21.06:0,21,598	1/1:4,6:10:27.07:574,27,0	1/1:3,11:14:36.10:890,36,0	1/1:6,9:15:41.97:887,42,0	0/0:8,0:8:24.07:0,24,792	1/1:5,6:11:33:630,33,0	1/1:6,15:21:24.72:1279,25,0	1/1:7,3:10:26.97:468,27,0	1/1:9,9:18:53.94:916,54,0	1/1:15,2:17:35.92:492,36,0	1/1:12,2:13:30.02:464,30,0	1/1:6,13:18:48.10:1151,48,0	1/1:14,4:18:50.71:699,51,0	1/1:6,7:13:36.05:702,36,0	0/0:18,0:18:45.05:0,45,1475	0/0:20,0:20:53.16:0,53,1951	1/1:10,12:22:57.15:1214,57,0	1/1:5,13:18:51.15:1159,51,0	1/1:12,7:19:48.07:874,48,0	1/1:5,0:5:8.97:70,9,0
chr10	64983184	.	AT	A	381.02	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=0.538;DP=487;FS=2.048;HRun=5;HaplotypeScore=137.0378;InbreedingCoeff=0.7289;MQ=59.12;MQ0=8;MQRankSum=1.258;QD=17.32;ReadPosRankSum=-3.090;VQSLOD=1.7357;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:20:48.16:0,48,655	0/0:4,0:4:6.02:0,6,82	0/0:40,1:17:14.20:0,14,454	0/0:41,0:17:9.60:0,10,321	0/0:14,0:14:42.14:0,42,573	0/0:18,0:17:48.16:0,48,649	0/0:16,0:16:44.18:0,44,580	1/1:4,18:20:42:476,42,0	0/0:9,0:9:24.05:0,24,296	0/0:12,0:12:30.06:0,30,389	0/0:15,0:15:45.10:0,45,576	0/0:16,0:15:27.05:0,27,344	0/0:15,0:15:36.59:0,37,493	0/0:11,0:10:18.06:0,18,246	0/0:17,0:17:39.04:0,39,485	0/0:10,0:10:30.10:0,30,400	0/0:22,0:22:63.21:0,63,856	0/0:12,0:12:33.11:0,33,440	0/0:23,0:23:60.20:0,60,819	0/0:20,0:20:54.18:0,54,737	0/0:15,0:15:36.12:0,36,486	0/0:14,0:14:39.13:0,39,533	0/0:15,0:15:42.14:0,42,574	0/0:27,0:26:69.23:0,69,929	0/0:20,0:20:54.18:0,54,737	0/0:24,0:24:66.20:0,66,875	0/0:11,0:11:27.09:0,27,369	0/0:2,0:2:3.01:0,3,41
chr10	64983196	.	CTT	C	5536.09	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=0.516;DP=478;FS=8.997;HRun=12;HaplotypeScore=108.3179;InbreedingCoeff=0.9299;MQ=56.92;MQ0=16;MQRankSum=-2.535;QD=21.05;ReadPosRankSum=3.390;VQSLOD=3.6682;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:22:59.96:0,60,594	1/1:1,1:2:3:30,3,0	0/0:40,1:13:15.23:0,15,146	0/0:39,0:14:10.05:0,10,158	0/0:5,0:15:41.87:0,42,419	1/1:5,11:15:33.04:336,33,0	1/1:0,17:17:51.12:519,51,0	0/0:19,0:19:21.77:0,22,205	0/0:8,0:10:29.07:0,29,376	1/1:4,8:12:18.01:183,18,0	1/1:1,14:16:32.80:383,33,0	1/1:2,12:13:18.03:183,18,0	0/0:13,0:15:42.59:0,43,588	1/1:1,7:7:20.64:193,21,0	1/1:6,8:13:21.02:214,21,0	1/1:3,5:9:23.77:223,24,0	1/1:5,17:20:56.10:531,56,0	1/1:1,9:10:24.03:244,24,0	1/1:3,16:19:35.14:417,35,0	1/1:5,14:19:47.93:467,48,0	1/1:4,8:13:26.78:256,27,0	1/1:2,12:14:36.07:366,36,0	0/0:13,0:15:41.62:0,42,574	0/0:29,1:33:37.33:0,37,767	1/1:7,12:19:23.63:282,24,0	1/1:7,16:23:22.86:464,23,0	1/1:3,9:12:21.02:213,21,0	1/1:1,1:2:3.01:31,3,0
chr10	64983329	.	G	GGTGTGTGTGTGT	3948.69	PASS	AB=0.837;AC=40;AF=0.769;AN=52;BaseQRankSum=0.703;DP=546;FS=0.000;HRun=0;HaplotypeScore=176.5099;InbreedingCoeff=0.3644;MQ=52.52;MQ0=36;MQRankSum=-1.624;QD=11.09;ReadPosRankSum=-1.826;VQSLOD=2.4033;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:26:2.91:0,3,162	1/1:6,0:6:5.99:60,6,0	./.	./.	0/0:14,0:27:24.05:0,24,448	1/1:24,0:25:6.02:244,6,0	1/1:27,0:24:12.04:202,12,0	0/1:2,0:14:27.27:60,0,27	0/1:10,0:11:8.52:9,0,313	1/1:22,0:25:12.03:305,12,0	0/1:7,0:8:0:0,0,0	1/1:8,0:10:10.59:211,11,0	0/1:19,0:19:59.27:59,0,641	1/1:9,0:9:6.02:112,6,0	1/1:10,0:12:6.02:155,6,0	1/1:10,3:12:2.27:155,2,0	1/1:24,0:31:18.06:706,18,0	1/1:7,0:9:6.02:272,6,0	1/1:18,0:19:12.04:360,12,0	1/1:12,0:15:5.78:119,6,0	1/1:25,0:31:3.90:40,4,0	1/1:11,5:18:5.99:195,6,0	0/0:16,0:16:18.03:0,18,419	0/0:35,0:39:38.02:0,38,1420	1/1:5,1:7:3.01:174,3,0	1/1:14,0:14:9.02:207,9,0	1/1:11,0:12:11.05:240,11,0	1/1:0,0:1:3.01:65,3,0
chr10	64984000	.	C	CA	654.74	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-4.116;DP=529;FS=19.419;HRun=5;HaplotypeScore=68.8266;InbreedingCoeff=0.8639;MQ=74.16;MQ0=0;MQRankSum=1.963;QD=32.74;ReadPosRankSum=0.217;VQSLOD=1.7959;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:75.16:0,75,794	0/0:6,0:6:18.05:0,18,193	0/0:15,0:15:39.01:0,39,387	0/0:12,0:12:5.81:0,6,152	1/1:1,19:20:57.19:750,57,0	0/0:27,0:27:66.14:0,66,701	0/0:26,0:26:69.17:0,69,741	0/0:30,0:30:72.18:0,72,773	0/0:21,0:21:60.13:0,60,635	0/0:26,0:26:69.17:0,69,740	0/0:10,0:10:18.04:0,18,190	0/0:20,0:20:42.08:0,42,440	0/0:17,0:17:48.11:0,48,508	0/0:23,0:23:57.14:0,57,612	0/0:13,0:13:33.08:0,33,354	0/0:14,0:14:39.10:0,39,419	0/0:27,0:27:63.15:0,63,674	0/0:27,0:27:69.17:0,69,741	0/0:18,0:18:42.10:0,42,448	0/0:16,0:16:42.10:0,42,449	0/0:16,0:16:33.08:0,33,355	0/0:21,0:21:57.14:0,57,612	0/0:21,0:21:60.13:0,60,635	0/0:18,0:18:42.10:0,42,451	0/0:12,0:12:30.07:0,30,322	0/0:18,0:18:51.12:0,51,541	0/0:23,0:23:69.17:0,69,741	0/0:4,0:4:12.03:0,12,129
chr10	64984286	.	A	AAC	1460.84	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-6.046;DP=648;FS=6.741;HRun=0;HaplotypeScore=82.4308;InbreedingCoeff=0.9666;MQ=69.72;MQ0=1;MQRankSum=-0.121;QD=24.76;ReadPosRankSum=1.244;VQSLOD=4.1588;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:9,19:28:45.15:735,45,0	0/0:13,0:13:33.11:0,33,420	0/0:38,0:32:72.23:0,72,925	0/0:30,0:26:38.41:0,38,528	1/1:7,23:30:51.17:847,51,0	0/0:18,0:18:45.14:0,45,572	0/0:24,0:24:63.18:0,63,784	0/0:21,0:21:45.08:0,45,294	0/0:29,0:29:84.25:0,84,1054	0/0:21,0:21:45.14:0,45,573	0/0:8,0:8:18.06:0,18,229	0/0:21,0:21:57.18:0,57,725	0/0:21,0:21:60.18:0,60,750	0/0:16,0:16:39.12:0,39,496	0/0:27,0:27:63.19:0,63,789	0/0:17,0:17:39.12:0,39,496	0/0:40,0:40:93.26:0,93,1153	0/0:19,0:19:54.17:0,54,685	0/0:22,0:22:60.19:0,60,763	0/0:22,0:22:57.18:0,57,726	0/0:30,0:30:78.23:0,78,977	0/0:22,0:22:54.17:0,54,687	0/0:21,0:21:51.16:0,51,649	0/0:28,0:28:69.22:0,69,878	0/0:20,0:20:54.16:0,54,673	0/0:33,0:33:84.27:0,84,1069	0/0:25,0:25:57.18:0,57,726	0/0:3,0:3:9.03:0,9,113
chr10	64984295	.	ACATGCATG	A	871.56	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.775;DP=646;FS=0.870;HRun=0;HaplotypeScore=163.7911;InbreedingCoeff=0.9409;MQ=67.07;MQ0=1;MQRankSum=-1.886;QD=48.42;ReadPosRankSum=-3.751;VQSLOD=2.7005;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:51.01:0,51,1759	0/0:12,0:12:36.12:0,36,1479	0/0:44,0:39:99:0,102,3670	0/0:28,0:22:56.43:0,56,2213	0/0:29,0:28:54.02:0,54,1724	0/0:18,0:18:51.18:0,51,2118	0/0:28,0:28:84.26:0,84,2887	1/1:1,17:18:50.54:966,51,0	0/0:33,0:33:96.33:0,96,3843	0/0:19,0:19:54.19:0,54,2099	0/0:10,0:10:21.05:0,21,729	0/0:21,0:21:60.21:0,60,2619	0/0:21,0:21:63.20:0,63,2611	0/0:16,0:16:42.14:0,42,1877	0/0:23,0:23:69.21:0,69,2635	0/0:16,0:16:42.13:0,42,1766	0/0:38,0:38:99:0,105,4328	0/0:21,0:21:60.16:0,60,2417	0/0:23,0:23:66.22:0,66,2428	0/0:23,0:23:63.22:0,63,2657	0/0:31,0:31:93.32:0,93,4040	0/0:21,0:21:60.18:0,60,2278	0/0:20,0:20:60.19:0,60,2252	0/0:30,0:30:87.22:0,87,3195	0/0:20,0:20:54.17:0,54,2134	0/0:35,0:35:99:0,99,4038	0/0:21,0:21:57.20:0,57,2467	0/0:3,0:3:8.97:0,9,178
chr10	64984533	.	C	CT	813.02	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-3.794;DP=634;FS=10.308;HRun=5;HaplotypeScore=70.5853;InbreedingCoeff=0.9938;MQ=86.76;MQ0=0;MQRankSum=-2.830;QD=30.11;ReadPosRankSum=1.391;VQSLOD=3.8794;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,108,1139	0/0:8,0:8:24.06:0,24,258	0/0:25,0:25:48.54:0,49,616	0/0:19,0:19:42.07:0,42,430	1/1:0,27:27:69.22:908,69,0	0/0:19,0:19:51.09:0,51,529	0/0:23,0:23:63.14:0,63,669	0/0:32,0:32:90.22:0,90,967	0/0:23,0:23:60.12:0,60,628	0/0:32,0:32:78.19:0,78,837	0/0:16,0:16:45.09:0,45,469	0/0:22,0:22:57.14:0,57,612	0/0:24,0:24:69.16:0,69,732	0/0:14,0:14:39.10:0,39,419	0/0:22,0:22:63.16:0,63,677	0/0:19,0:19:57.14:0,57,611	0/0:22,0:22:63.13:0,63,666	0/0:16,0:16:45.11:0,45,483	0/0:22,0:22:51.13:0,51,548	0/0:21,0:21:54.13:0,54,579	0/0:33,0:33:87.22:0,87,935	0/0:21,0:21:63.14:0,63,662	0/0:23,0:23:60.15:0,60,644	0/0:32,0:32:96.22:0,96,1022	0/0:17,0:17:45.10:0,45,477	0/0:30,0:30:87.21:0,87,929	0/0:26,0:24:78.20:0,78,837	0/0:7,0:7:21.05:0,21,226
chr10	64985145	.	AGG	A	1032.69	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.302;DP=690;FS=6.623;HRun=3;HaplotypeScore=79.0408;InbreedingCoeff=0.9992;MQ=88.80;MQ0=0;MQRankSum=-1.676;QD=39.72;ReadPosRankSum=-3.062;VQSLOD=2.4070;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,138,2639	0/0:15,0:15:45.15:0,45,868	0/0:24,0:24:69.21:0,69,1262	0/0:28,0:28:72.08:0,72,1332	0/0:30,0:30:90.31:0,90,1737	0/0:22,0:22:66.23:0,66,1275	0/0:22,0:22:63.18:0,63,1107	1/1:1,25:26:75.24:1128,75,0	0/0:25,0:25:72.25:0,72,1347	0/0:30,0:30:87.27:0,87,1613	0/0:11,0:11:33.10:0,33,591	0/0:23,0:23:66.22:0,66,1241	0/0:26,0:26:78.25:0,78,1467	0/0:11,0:11:33.11:0,33,637	0/0:34,0:34:99:0,99,1881	0/0:11,0:11:33.10:0,33,607	0/0:27,0:27:81.27:0,81,1523	0/0:21,0:21:63.19:0,63,1155	0/0:29,0:29:87.24:0,87,1609	0/0:23,0:23:69.24:0,69,1331	0/0:42,0:42:99:0,126,2426	0/0:18,0:18:51.17:0,51,951	0/0:16,0:16:45.14:0,45,816	0/0:35,0:35:99:0,105,2028	0/0:21,0:21:63.22:0,63,1189	0/0:33,0:33:93.30:0,93,1726	0/0:26,0:26:78.25:0,78,1456	0/0:15,0:15:45.15:0,45,869
chr10	64985767	.	C	CATG	1536.63	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-8.192;DP=576;FS=19.811;HRun=0;HaplotypeScore=102.4127;InbreedingCoeff=0.8427;MQ=70.62;MQ0=0;MQRankSum=-1.335;QD=39.40;ReadPosRankSum=-5.095;VQSLOD=1.6296;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:71.92:0,72,1238	0/0:10,0:10:24.08:0,24,342	0/0:15,0:15:30.10:0,30,428	0/0:32,0:32:78.21:0,78,1045	0/0:23,0:23:51.15:0,51,707	0/0:20,0:20:45.12:0,45,606	0/0:17,0:17:33.11:0,33,470	1/1:12,26:39:81.28:1631,81,0	0/0:23,0:23:66.19:0,66,903	0/0:19,0:19:42.14:0,42,599	0/0:20,0:20:45.14:0,45,625	0/0:18,0:18:35.78:0,36,464	0/0:14,0:14:30.10:0,30,427	0/0:14,0:14:30.10:0,30,427	0/0:25,0:25:63.21:0,63,897	0/0:12,0:12:27.08:0,27,368	0/0:21,0:21:54.17:0,54,753	0/0:14,0:16:45.03:0,45,542	0/0:24,0:24:27.07:0,27,364	0/0:27,0:27:66.22:0,66,941	0/0:23,0:23:48.13:0,48,648	0/0:12,0:12:21.07:0,21,299	0/0:23,0:23:57.19:0,57,811	0/0:20,0:20:42.14:0,42,597	0/0:14,0:14:27.09:0,27,385	0/0:26,0:26:66.22:0,66,940	0/0:20,0:20:45.15:0,45,640	0/0:2,0:2:3.01:0,3,43
chr10	64985915	.	A	ATTCTTC	5054.70	PASS	AB=1.000;AC=42;AF=0.750;AN=56;BaseQRankSum=3.261;DP=404;FS=1.307;HRun=0;HaplotypeScore=98.3666;InbreedingCoeff=0.6013;MQ=81.35;MQ0=0;MQRankSum=-5.884;QD=16.36;ReadPosRankSum=-3.382;VQSLOD=3.2518;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:14,2:16:24.08:702,24,0	1/1:4,0:5:6.01:123,6,0	0/0:18,0:17:11.10:0,11,142	0/0:22,0:17:18.69:0,19,180	0/0:19,0:19:51.09:0,51,923	1/1:19,0:19:6.02:122,6,0	1/1:11,0:11:12.03:213,12,0	1/1:39,0:39:75.11:1135,75,0	1/1:7,8:15:21.06:555,21,0	1/1:18,0:18:13.71:146,14,0	1/1:8,0:8:3.01:55,3,0	1/1:9,0:9:2.07:73,2,0	0/0:13,0:13:32.91:0,33,520	1/1:11,0:11:6:55,6,0	1/1:12,0:12:6.02:121,6,0	0/1:6,0:6:1.54:36,0,2	1/1:13,0:13:11.99:224,12,0	1/1:11,0:11:12.40:208,12,0	0/1:23,0:22:13.86:302,0,14	1/1:14,0:14:5.72:113,6,0	1/1:8,0:8:1.33:34,1,0	1/1:9,0:9:8.30:90,8,0	0/0:12,0:12:24.08:0,24,458	0/0:11,0:11:27.09:0,27,533	1/1:15,0:16:8.92:156,9,0	1/1:19,0:18:16.59:315,17,0	1/1:20,0:20:11.93:209,12,0	1/1:7,0:7:3.90:66,4,0
chr10	64985921	.	C	CTTCTTTT	8029.30	PASS	AB=1.000;AC=45;AF=0.804;AN=56;BaseQRankSum=0.998;DP=503;FS=14.156;HRun=0;HaplotypeScore=115.9805;InbreedingCoeff=0.6881;MQ=74.09;MQ0=0;MQRankSum=-3.207;QD=19.30;ReadPosRankSum=-3.502;VQSLOD=1.9801;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:18:15.05:412,15,0	1/1:0,4:7:6.01:206,6,0	0/1:18,0:18:23.02:23,0,74	0/0:19,0:13:8.95:0,9,111	0/0:22,0:25:34.56:0,35,776	1/1:3,0:25:9.03:142,9,0	1/1:1,4:12:12.04:363,12,0	1/1:38,0:38:64.75:727,65,0	1/1:19,0:19:1.01:374,1,0	1/1:3,0:18:34.36:421,34,0	1/1:2,5:16:19.75:217,20,0	1/1:12,0:12:35.74:365,36,0	0/0:13,0:13:28.73:0,29,279	1/1:15,0:15:24.02:303,24,0	1/1:1,9:20:6.02:204,6,0	1/1:10,0:10:26.90:275,27,0	1/1:3,0:17:12.04:351,12,0	1/1:1,0:16:8.05:197,8,0	1/1:6,0:26:59.92:984,60,0	1/1:3,1:21:29.70:383,30,0	1/1:7,0:7:20.90:316,21,0	1/1:1,8:10:12.91:179,13,0	0/0:17,0:17:6.64:0,7,376	0/0:13,0:13:7.78:0,8,449	1/1:1,10:21:9.03:252,9,0	1/1:2,15:29:68.90:794,69,0	1/1:6,11:27:19.17:402,19,0	1/1:3,4:11:9.97:139,10,0
chr10	64985923	.	T	TCTTC	2745.28	PASS	AB=1.000;AC=26;AF=0.464;AN=56;BaseQRankSum=-0.494;DP=461;FS=29.325;HRun=0;HaplotypeScore=91.8848;InbreedingCoeff=-0.1391;MQ=71.96;MQ0=0;MQRankSum=-4.364;QD=8.05;ReadPosRankSum=5.277;VQSLOD=0.6429;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:16,0:16:1.23:275,0,1	1/1:7,0:7:3.59:62,4,0	0/0:18,0:16:6.05:0,6,182	0/0:20,0:12:21.21:0,21,201	0/0:27,0:27:75.13:0,75,1096	0/1:22,0:22:13.89:29,0,14	0/1:9,0:9:4.86:109,0,5	1/1:9,23:38:61.96:1393,62,0	0/1:18,0:18:99:245,0,181	0/1:15,0:15:38:59,0,38	0/1:16,0:16:3.64:4,0,146	0/1:12,0:12:41.76:42,0,73	0/0:13,0:13:38.91:0,39,553	0/0:9,0:15:18.58:0,19,120	0/1:17,0:17:10.88:31,0,11	0/1:10,0:10:23.48:23,0,97	0/1:14,0:14:29.81:30,0,30	1/1:14,0:14:8.79:88,9,0	0/1:20,0:19:55.13:55,0,121	0/1:17,0:17:44.22:44,0,123	1/1:7,0:7:2.49:84,2,0	0/1:9,0:9:10.59:47,0,11	0/0:15,0:15:17.64:0,18,571	0/0:12,0:12:36.08:0,36,591	1/1:18,0:18:8.99:92,9,0	0/1:28,0:27:99:114,0,163	0/1:24,0:24:11.20:70,0,11	0/1:10,0:10:18:18,0,95
chr10	64986360	.	G	GAA	4317.78	PASS	AB=0.916;AC=41;AF=0.732;AN=56;BaseQRankSum=7.842;DP=493;FS=4.389;HRun=10;HaplotypeScore=135.9457;InbreedingCoeff=0.5034;MQ=50.33;MQ0=33;MQRankSum=-6.297;QD=10.79;ReadPosRankSum=-4.544;VQSLOD=1.6122;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:20,0:20:12.87:13,0,54	1/1:2,5:6:8.99:103,9,0	0/0:22,0:5:2.54:0,3,10	0/1:29,0:12:14.14:14,0,77	0/0:26,0:26:46.37:0,46,434	1/1:12,3:15:29.91:317,30,0	1/1:10,2:9:12.69:129,13,0	1/1:23,0:29:23.91:219,24,0	0/1:9,0:9:8.19:8,0,31	1/1:15,3:18:38.97:407,39,0	1/1:14,11:26:35.66:356,36,0	1/1:6,3:9:10.57:94,11,0	0/0:10,0:9:21.02:0,21,213	1/1:10,1:12:16.52:181,17,0	1/1:6,5:10:6.02:80,6,0	1/1:9,0:9:3.01:44,3,0	1/1:22,1:23:9.56:329,10,0	1/1:9,5:14:15.29:134,15,0	0/1:23,1:19:3.49:224,0,3	0/1:10,11:21:1.15:197,0,1	1/1:11,1:12:9.02:105,9,0	1/1:14,1:14:22.40:211,22,0	0/0:17,0:18:38.71:0,39,359	0/0:15,0:15:26.92:0,27,266	1/1:14,3:17:19.31:185,19,0	1/1:20,11:31:52.41:519,52,0	1/1:22,1:22:36.18:313,36,0	1/1:8,0:8:14.95:135,15,0
chr10	64986371	.	G	GAAAA	4584.63	PASS	AB=1.000;AC=46;AF=0.821;AN=56;BaseQRankSum=4.068;DP=477;FS=1.144;HRun=11;HaplotypeScore=86.3809;InbreedingCoeff=0.6432;MQ=51.69;MQ0=12;MQRankSum=-7.688;QD=11.24;ReadPosRankSum=-2.038;VQSLOD=0.7372;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,0:32:9.92:176,10,0	1/1:5,1:5:4.83:44,5,0	0/1:30,0:6:3.73:4,0,55	0/1:30,0:15:9.17:9,0,183	0/0:23,0:24:16.92:0,17,394	1/1:15,2:18:50.13:527,50,0	1/1:10,1:11:14.94:181,15,0	1/1:31,0:30:31.58:380,32,0	1/1:1,0:7:8.90:74,9,0	1/1:16,1:17:36.26:306,36,0	1/1:26,1:28:48.14:397,48,0	1/1:9,0:9:14.43:144,14,0	0/0:10,0:11:23.87:0,24,285	1/1:12,0:12:22.98:194,23,0	1/1:6,9:17:5.49:24,5,0	1/1:5,0:4:3.01:53,3,0	1/1:22,1:22:30.13:262,30,0	1/1:9,0:9:10.77:61,11,0	1/1:24,0:18:41.66:401,42,0	1/1:19,1:21:26.45:297,26,0	1/1:4,0:4:2.88:8,3,0	1/1:10,0:10:12.21:129,12,0	0/0:19,0:19:42.78:0,43,487	0/0:14,0:14:39.03:0,39,486	1/1:10,1:11:20.27:245,20,0	1/1:24,2:26:50.36:454,50,0	1/1:21,1:21:33.17:185,33,0	1/1:4,0:4:3.89:28,4,0
chr10	64986495	.	T	TA	471.90	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-1.027;DP=469;FS=1.960;HRun=8;HaplotypeScore=100.3633;InbreedingCoeff=0.8998;MQ=72.82;MQ0=0;MQRankSum=-5.885;QD=20.52;ReadPosRankSum=-4.004;VQSLOD=1.8995;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:90.04:0,90,823	0/0:5,0:5:15:0,15,132	0/0:11,0:11:10.45:0,10,125	0/0:13,0:13:19.51:0,20,183	0/0:20,0:20:54.03:0,54,494	0/0:17,0:17:33:0,33,302	0/0:15,0:15:33.02:0,33,302	1/1:10,13:21:51.11:567,51,0	0/0:9,0:9:27.01:0,27,247	0/0:22,0:22:60.02:0,60,549	0/0:17,0:18:44.04:0,44,386	0/0:10,0:10:14.98:0,15,137	0/0:10,0:10:27.01:0,27,247	0/0:14,0:14:33.01:0,33,302	0/0:17,0:17:33.02:0,33,302	0/0:13,0:13:36.02:0,36,330	0/0:30,0:30:69.01:0,69,626	0/0:19,0:19:50.99:0,51,459	0/0:23,0:23:50.99:0,51,463	0/0:15,0:15:39:0,39,352	0/0:23,0:23:60.02:0,60,549	0/0:12,0:12:26.92:0,27,232	0/0:16,0:16:32.99:0,33,302	0/0:11,0:11:17.88:0,18,165	0/0:16,0:16:27:0,27,247	0/0:21,0:21:57.03:0,57,522	0/0:20,0:19:44.99:0,45,406	0/0:8,0:8:15:0,15,137
chr10	64986509	.	TA	T	6262.88	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=7.372;DP=474;FS=12.038;HRun=11;HaplotypeScore=85.8282;InbreedingCoeff=0.9562;MQ=69.13;MQ0=0;MQRankSum=0.402;QD=20.07;ReadPosRankSum=3.416;VQSLOD=4.9473;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:87.22:0,87,926	1/1:2,3:5:11.96:95,12,0	0/0:13,1:13:3.39:0,3,161	0/0:10,0:9:20.86:0,21,192	0/0:25,1:26:44.41:0,44,654	1/1:1,13:14:32.96:271,33,0	1/1:1,16:17:38.95:320,39,0	0/0:25,0:23:54.38:0,54,296	0/0:13,1:14:11.45:0,11,313	1/1:3,18:21:53.91:440,54,0	1/1:2,12:14:35.95:295,36,0	1/1:1,10:11:26.97:222,27,0	0/0:10,0:10:21.04:0,21,218	1/1:3,9:12:29.94:243,30,0	1/1:0,14:14:32.86:271,33,0	1/1:2,13:15:32.94:271,33,0	1/1:1,24:26:68.67:554,69,0	1/1:0,18:18:53.94:443,54,0	1/1:2,23:25:71.39:572,71,0	1/1:5,9:14:26.94:218,27,0	1/1:2,22:24:65.91:541,66,0	1/1:2,13:15:35.92:289,36,0	0/0:15,0:15:25.13:0,25,307	0/0:10,1:11:24.04:0,24,247	1/1:1,16:17:38.95:320,39,0	1/1:8,15:23:47.62:381,48,0	1/1:1,19:20:50.93:419,51,0	1/1:3,4:7:11.97:98,12,0
chr10	64986518	.	A	AAAACAAAAC	3539.98	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-8.334;DP=497;FS=4.027;HRun=0;HaplotypeScore=184.6358;InbreedingCoeff=0.8822;MQ=69.84;MQ0=0;MQRankSum=-3.135;QD=90.77;ReadPosRankSum=-4.870;VQSLOD=2.5602;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,99,2506	0/0:4,0:4:12.04:0,12,267	0/0:14,0:13:8.41:0,8,579	0/0:12,0:11:24:0,24,562	0/0:26,0:26:72.20:0,72,1823	0/0:16,0:16:42.11:0,42,814	0/0:18,0:18:45.15:0,45,952	1/1:9,24:37:99:3540,108,0	0/0:14,0:14:39.12:0,39,988	0/0:20,0:20:54.18:0,54,1189	0/0:16,0:16:48.12:0,48,894	0/0:10,0:10:27.09:0,27,604	0/0:14,0:14:36.08:0,36,772	0/0:11,0:11:33.11:0,33,722	0/0:17,0:17:42.09:0,42,855	0/0:16,0:16:33.11:0,33,732	0/0:28,0:28:78.25:0,78,1627	0/0:21,0:21:63.21:0,63,1327	0/0:26,0:26:78.26:0,78,1691	0/0:11,0:11:30.97:0,31,593	0/0:23,0:23:69.23:0,69,1461	0/0:15,0:15:42.14:0,42,905	0/0:13,0:13:33.10:0,33,899	0/0:11,0:11:26.45:0,26,714	0/0:20,0:20:48.14:0,48,935	0/0:19,0:19:57.17:0,57,1135	0/0:20,0:20:51.16:0,51,1094	0/0:5,0:5:12.04:0,12,269
chr10	64987113	.	CGAGG	C	29950.21	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=10.164;DP=761;FS=0.351;HRun=0;HaplotypeScore=150.6779;InbreedingCoeff=0.9840;MQ=69.16;MQ0=2;MQRankSum=-5.890;QD=48.86;ReadPosRankSum=5.540;VQSLOD=5.5967;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,38:38:75.01:1565,75,0	1/1:0,9:9:24.08:503,24,0	0/0:21,0:20:51.17:0,51,1298	0/0:17,0:18:7.79:0,8,766	0/0:34,0:34:99:0,102,2894	1/1:0,20:20:45.15:944,45,0	1/1:0,25:24:54.19:1131,54,0	1/1:0,30:25:69.16:1204,69,0	1/1:0,36:35:96.33:1998,96,0	1/1:0,26:24:72.25:1505,72,0	1/1:0,23:23:39.13:807,39,0	1/1:0,25:24:60.21:1258,60,0	0/0:27,0:27:78.25:0,78,2177	1/1:0,26:25:72.25:1509,72,0	1/1:0,32:32:75.26:1572,75,0	1/1:0,39:38:99:2264,108,0	1/1:0,37:36:96.33:2013,96,0	1/1:0,29:29:81.28:1699,81,0	1/1:0,20:17:42.05:868,42,0	1/1:0,23:23:51.18:1070,51,0	1/1:0,58:55:99:2580,123,0	1/1:0,19:17:27.09:566,27,0	0/0:22,0:22:63.22:0,63,1834	0/0:26,0:26:78.25:0,78,2197	1/1:0,22:22:39.13:818,39,0	1/1:0,34:32:96.33:2002,96,0	1/1:0,31:29:69.24:1447,69,0	1/1:1,10:11:30.10:628,30,0
chr10	64987951	.	A	ACGGTCGGTGGT	54608.46	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-8.815;DP=768;FS=6.405;HRun=0;HaplotypeScore=239.5146;InbreedingCoeff=0.9971;MQ=63.07;MQ0=0;MQRankSum=-19.255;QD=108.14;ReadPosRankSum=0.137;VQSLOD=4.2002;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:64,0:64:99:0,166,5541	1/1:8,9:18:51.18:2496,51,0	0/0:26,0:26:45.74:0,46,2218	0/0:31,0:31:39.21:0,39,1767	0/0:16,0:16:45.15:0,45,1498	1/1:15,10:27:54.18:2632,54,0	1/1:18,11:34:75.26:3834,75,0	0/0:33,0:33:81.25:0,81,2354	0/0:19,0:19:54.17:0,54,1729	1/1:16,11:30:84.29:3869,84,0	1/1:11,12:25:48.16:2572,48,0	1/1:9,22:32:84.29:4202,84,0	0/0:23,0:23:63.20:0,63,1951	1/1:13,15:31:63.22:2749,63,0	1/1:12,22:38:84.24:4362,84,0	1/1:9,14:27:63.22:3208,63,0	1/1:13,12:28:53.74:2883,54,0	1/1:11,10:22:54.19:2806,54,0	1/1:12,8:25:68.93:2211,69,0	1/1:11,7:20:22.84:1590,23,0	1/1:19,10:32:54.19:2852,54,0	1/1:14,12:28:54.10:2407,54,0	0/0:25,0:25:75.24:0,75,2402	0/0:26,0:25:63.18:0,63,2005	1/1:13,8:23:45.15:2175,45,0	1/1:17,17:35:90.31:4438,90,0	1/1:11,11:24:54.11:2621,54,0	1/1:4,2:6:15.05:700,15,0
chr10	64988183	.	C	CA	840.77	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-4.464;DP=574;FS=12.662;HRun=6;HaplotypeScore=78.4672;InbreedingCoeff=0.9415;MQ=81.92;MQ0=0;MQRankSum=-5.146;QD=25.48;ReadPosRankSum=-3.895;VQSLOD=1.4344;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,123,1228	0/0:3,0:3:9.02:0,9,92	0/0:24,0:25:48.81:0,49,501	0/0:18,0:17:26.23:0,26,295	0/0:15,0:15:42.09:0,42,428	0/0:13,0:13:33.07:0,33,337	0/0:27,0:27:50.30:0,50,658	1/1:6,27:33:50.66:936,51,0	0/0:26,0:26:63.13:0,63,643	0/0:18,0:18:48.10:0,48,489	0/0:18,0:18:42.07:0,42,423	0/0:29,0:29:72.11:0,72,717	0/0:21,0:21:60.13:0,60,612	0/0:19,0:19:51.01:0,51,484	0/0:18,0:18:51.07:0,51,503	0/0:18,0:18:48.11:0,48,490	0/0:30,0:30:87.20:0,87,887	0/0:14,0:14:39.04:0,39,386	0/0:24,0:24:63.11:0,63,633	0/0:11,0:11:27.05:0,27,271	0/0:20,0:20:57.13:0,57,581	0/0:16,0:16:33.07:0,33,336	0/0:17,0:17:48.08:0,48,477	0/0:18,0:18:45.10:0,45,459	0/0:13,0:13:36.06:0,36,359	0/0:28,0:28:66.13:0,66,668	0/0:29,0:29:81.14:0,81,809	0/0:10,0:10:27.06:0,27,275
chr10	64988626	.	CGGAGAG	C	1224.83	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.010;DP=609;FS=3.099;HRun=0;HaplotypeScore=150.1295;InbreedingCoeff=0.9698;MQ=96.08;MQ0=0;MQRankSum=-6.659;QD=51.03;ReadPosRankSum=-1.831;VQSLOD=3.6029;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,135,4514	0/0:4,0:4:12.04:0,12,424	0/0:35,0:35:96.29:0,96,2716	0/0:23,0:23:63.22:0,63,2111	0/0:25,0:25:69.24:0,69,2343	0/0:18,0:18:48.12:0,48,1610	0/0:26,0:26:72.23:0,72,2349	1/1:5,19:24:57.20:1320,57,0	0/0:24,0:24:66.20:0,66,2192	0/0:19,0:19:57.20:0,57,1933	0/0:16,0:16:48.16:0,48,1623	0/0:17,0:17:48.15:0,48,1546	0/0:22,0:22:66.21:0,66,2248	0/0:20,0:20:60.21:0,60,2081	0/0:23,0:23:69.24:0,69,2437	0/0:20,0:20:60.21:0,60,2043	0/0:25,0:25:69.24:0,69,2355	0/0:23,0:23:69.24:0,69,2438	0/0:16,0:16:45.15:0,45,1456	0/0:16,0:16:42.14:0,42,1424	0/0:36,0:36:99:0,108,3576	0/0:11,0:11:30.10:0,30,922	0/0:16,0:16:45.15:0,45,1531	0/0:23,0:23:63.22:0,63,2224	0/0:17,0:17:45.15:0,45,1559	0/0:19,0:19:57.19:0,57,1845	0/0:20,0:20:57.20:0,57,2013	0/0:21,0:21:60.21:0,60,2100
chr10	64989051	.	ACC	A	649.05	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=8.187;DP=700;FS=0.710;HRun=2;HaplotypeScore=90.9910;InbreedingCoeff=0.9433;MQ=73.50;MQ0=0;MQRankSum=-1.494;QD=22.38;ReadPosRankSum=0.681;VQSLOD=1.8626;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,114,1553	0/0:15,0:15:45.13:0,45,839	0/0:26,0:26:78.12:0,78,1338	0/0:30,0:30:70.43:0,70,1171	0/0:9,0:9:27.07:0,27,477	0/0:21,0:21:56.67:0,57,1060	0/0:47,0:47:99:0,141,2541	0/0:26,0:26:78.22:0,78,1337	1/1:8,21:29:56.36:744,56,0	0/0:31,0:31:87.23:0,87,1631	0/0:11,0:10:30.09:0,30,572	0/0:27,0:27:81.27:0,81,1591	0/0:21,0:21:59.55:0,60,1122	0/0:27,0:27:75.22:0,75,1394	0/0:26,0:26:78.27:0,78,1520	0/0:32,0:32:96.27:0,96,1838	0/0:33,0:33:99:0,99,1819	0/0:19,0:19:57.09:0,57,1108	0/0:23,0:23:69.22:0,69,1270	0/0:10,0:10:30.10:0,30,590	0/0:42,0:42:99:0,126,2479	0/0:18,0:18:51.17:0,51,994	0/0:12,0:12:36.12:0,36,709	0/0:40,0:40:99:0,120,2293	0/0:18,0:18:54.19:0,54,1063	0/0:26,0:26:75.21:0,75,1307	0/0:25,0:25:75.22:0,75,1444	0/0:3,0:3:9.03:0,9,183
chr10	64989054	.	TC	T	416.07	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=8.634;DP=710;FS=0.000;HRun=2;HaplotypeScore=78.6562;InbreedingCoeff=0.9432;MQ=73.36;MQ0=0;MQRankSum=-2.128;QD=13.87;ReadPosRankSum=1.519;VQSLOD=2.9248;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,147,2187	0/0:15,0:15:45.13:0,45,650	0/0:26,0:26:40.38:0,40,998	0/0:31,0:31:69.16:0,69,971	0/0:11,0:11:30.08:0,30,403	0/0:21,0:21:56.75:0,57,833	0/0:45,0:45:99:0,129,1888	0/0:25,0:25:75.22:0,75,1049	1/1:5,25:30:57.72:511,58,0	0/0:30,0:30:87.28:0,87,1262	0/0:11,0:10:30.05:0,30,421	0/0:27,0:27:81.27:0,81,1204	0/0:21,0:21:63.21:0,63,941	0/0:25,0:25:72.23:0,72,1054	0/0:28,0:28:81.24:0,81,1149	0/0:34,0:34:99:0,102,1506	0/0:33,0:33:99:0,99,1403	0/0:20,0:20:60.20:0,60,898	0/0:22,0:22:60.17:0,60,857	0/0:10,0:10:27.09:0,27,403	0/0:48,0:48:99:0,141,2070	0/0:17,0:17:48.16:0,48,718	0/0:12,0:12:33.11:0,33,493	0/0:44,0:44:99:0,129,1791	0/0:19,0:19:54.17:0,54,787	0/0:26,0:26:75.22:0,75,1054	0/0:25,0:24:72.24:0,72,1075	0/0:4,0:4:9.03:0,9,135
chr10	64990538	.	T	TG	9481.30	PASS	AB=0.841;AC=44;AF=0.786;AN=56;BaseQRankSum=-7.194;DP=560;FS=3.077;HRun=8;HaplotypeScore=72.2199;InbreedingCoeff=0.7835;MQ=79.98;MQ0=2;MQRankSum=-1.970;QD=21.55;ReadPosRankSum=2.278;VQSLOD=5.3702;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,25:41:92.75:1008,93,0	1/1:1,9:10:21.06:242,21,0	0/0:38,0:29:26.85:0,27,301	0/1:37,0:28:20.40:20,0,198	0/0:22,0:24:63.95:0,64,543	1/1:4,19:23:23.82:527,24,0	1/1:2,17:19:42.12:484,42,0	1/1:32,0:32:83.34:355,83,0	1/1:2,0:14:25.68:134,26,0	1/1:2,16:18:42.10:472,42,0	1/1:5,12:17:30.09:342,30,0	1/1:3,17:20:51.15:588,51,0	0/0:19,0:19:54.02:0,54,492	1/1:0,10:10:27.01:311,27,0	1/1:1,13:14:30.09:346,30,0	1/1:0,7:7:21.06:242,21,0	1/1:5,31:36:53.78:873,54,0	1/1:2,16:18:45.13:519,45,0	0/1:8,7:15:27.86:207,0,28	1/1:3,16:19:48.06:527,48,0	1/1:4,12:16:33.10:381,33,0	1/1:1,17:18:42.12:485,42,0	0/0:20,0:20:48:0,48,439	0/0:19,0:19:50.98:0,51,458	1/1:2,7:9:15.04:173,15,0	1/1:4,10:14:33.01:362,33,0	1/1:4,13:17:39.05:433,39,0	1/1:1,14:15:39.12:450,39,0
chr10	64990540	.	G	GGA	1883.62	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=-6.461;DP=554;FS=1.184;HRun=0;HaplotypeScore=105.6796;InbreedingCoeff=0.6106;MQ=78.02;MQ0=2;MQRankSum=-0.299;QD=36.93;ReadPosRankSum=-3.670;VQSLOD=4.5348;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:22.48:0,22,258	0/0:10,0:10:15.36:0,15,49	0/0:34,0:25:53.30:0,53,729	0/0:36,0:27:54.55:0,55,537	0/0:26,0:26:72.17:0,72,1005	0/0:23,0:23:44.53:0,45,211	0/0:19,0:19:33.68:0,34,125	1/1:3,33:36:99:1829,105,0	0/1:15,0:15:32.59:161,0,33	0/0:18,0:18:34.81:0,35,135	0/0:15,0:15:25.65:0,26,101	0/0:19,0:19:40.74:0,41,148	0/0:20,0:20:60.18:0,60,875	0/0:10,0:10:19.78:0,20,64	0/0:13,0:13:22.20:0,22,71	0/0:8,0:8:15.54:0,16,51	0/0:35,0:35:69.72:0,70,306	0/0:19,0:19:39.27:0,39,154	0/0:14,0:14:34.49:0,34,265	0/0:20,0:20:37.05:0,37,146	0/0:15,0:15:30.42:0,30,130	0/0:18,0:18:33.90:0,34,125	0/0:20,0:20:60.13:0,60,831	0/0:20,0:20:57.17:0,57,829	0/0:7,0:7:10.70:0,11,34	0/0:14,0:14:34.34:0,34,173	0/0:16,0:16:32.35:0,32,128	0/0:15,0:15:31.84:0,32,115
chr10	64990723	.	C	CGTGTGTGTGTGT	10984.15	PASS	AB=0.782;AC=38;AF=0.704;AN=54;BaseQRankSum=-0.795;DP=505;FS=17.777;HRun=0;HaplotypeScore=153.2990;InbreedingCoeff=0.6390;MQ=65.08;MQ0=7;MQRankSum=-6.950;QD=33.08;ReadPosRankSum=-0.116;VQSLOD=3.4665;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:2,2:19:6.02:153,6,0	1/1:0,6:10:24.08:1049,24,0	0/0:40,0:26:52.42:0,52,1195	0/0:26,0:15:28.01:0,28,419	0/0:30,0:30:87.18:0,87,2578	1/1:7,3:11:22.24:923,22,0	1/1:13,1:14:16.74:334,17,0	1/1:31,0:30:12.11:655,12,0	1/1:4,0:17:29.36:368,29,0	1/1:9,0:23:11.10:739,11,0	1/1:2,11:18:12.04:409,12,0	1/1:0,1:9:9.03:493,9,0	0/0:24,0:24:72.19:0,72,1966	./.	1/1:11,5:16:25.05:1175,25,0	1/1:1,5:9:21.07:922,21,0	1/1:1,15:22:17.92:576,18,0	0/1:2,9:20:10.65:465,0,11	1/1:15,0:15:17.73:330,18,0	0/1:4,0:12:99:190,0,116	0/1:15,0:14:1.37:30,0,1	1/1:5,6:15:3:30,3,0	0/0:16,0:16:48.15:0,48,1516	0/0:23,0:23:63.12:0,63,1953	1/1:9,3:12:12.45:683,12,0	1/1:10,2:15:21.56:852,22,0	1/1:1,12:20:14.94:599,15,0	0/1:6,0:6:1.96:12,0,2
chr10	64991362	.	AT	A	11167.28	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=6.387;DP=606;FS=4.418;HRun=9;HaplotypeScore=67.5057;InbreedingCoeff=0.9985;MQ=76.18;MQ0=0;MQRankSum=-5.174;QD=22.93;ReadPosRankSum=2.120;VQSLOD=5.9007;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,36:38:93.05:851,93,0	1/1:0,8:8:24.01:220,24,0	0/0:18,0:18:36:0,36,360	0/0:13,0:13:20.99:0,21,214	0/0:30,0:30:75.21:0,75,856	1/1:1,19:20:57.03:522,57,0	1/1:2,22:24:57.02:522,57,0	1/1:5,36:41:99:932,102,0	1/1:4,12:16:30.01:274,30,0	1/1:2,28:30:84.04:768,84,0	1/1:3,19:22:48.01:439,48,0	1/1:2,21:23:60.02:549,60,0	0/0:17,0:17:45.11:0,45,497	1/1:0,15:14:39.02:357,39,0	1/1:1,17:18:48.03:439,48,0	1/1:0,19:20:56.07:500,56,0	1/1:3,23:26:63.03:577,63,0	1/1:2,14:16:42.02:384,42,0	1/1:2,16:18:47.99:429,48,0	1/1:1,20:21:57.02:522,57,0	1/1:3,18:21:45.01:412,45,0	1/1:0,17:17:48.02:439,48,0	0/0:23,0:23:57.12:0,57,634	0/0:18,0:18:48.14:0,48,554	1/1:2,21:21:51.02:467,51,0	1/1:2,23:25:66.03:604,66,0	1/1:5,27:32:75.03:686,75,0	1/1:3,10:13:29.88:274,30,0
chr10	64991454	.	CACACACAG	C	1309.26	PASS	AB=1.000;AC=38;AF=0.704;AN=54;BaseQRankSum=9.212;DP=520;FS=3.804;HRun=0;HaplotypeScore=180.5797;InbreedingCoeff=0.4598;MQ=50.17;MQ0=29;MQRankSum=-4.549;QD=3.87;ReadPosRankSum=2.330;VQSLOD=2.7731;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:23,5:28:17.28:185,17,0	0/1:9,0:8:0:0,0,4	1/1:31,0:10:2.84:14,3,0	0/0:27,0:10:3.48:0,3,52	0/0:31,0:29:72.18:0,72,1889	./.	1/1:18,0:17:0.47:1,0,0	0/0:20,0:22:20.73:0,21,226	1/1:9,7:15:18.06:358,18,0	1/1:19,0:16:26.69:206,27,0	1/1:17,0:17:13.69:82,14,0	1/1:9,0:9:4.50:83,4,0	0/0:17,0:16:21.99:0,22,599	1/1:8,0:8:3.91:21,4,0	1/1:10,0:10:1.82:5,2,0	1/1:13,0:13:11.59:69,12,0	1/1:17,0:17:6.99:75,7,0	1/1:9,0:7:5.77:33,6,0	0/1:11,0:8:38.76:39,0,101	1/1:25,0:24:4.35:27,4,0	1/1:31,0:27:2.76:23,3,0	0/1:22,0:20:13.50:18,0,14	0/0:23,0:22:30.87:0,31,1187	0/0:49,0:49:99:0,114,3765	0/1:15,0:15:11.59:54,0,12	1/1:13,0:10:10.28:91,10,0	1/1:10,0:10:3.63:23,4,0	1/1:7,0:7:8.98:71,9,0
chr10	64991462	.	GACAC	G	3781.48	PASS	AB=0.917;AC=38;AF=0.679;AN=56;BaseQRankSum=7.182;DP=492;FS=11.064;HRun=0;HaplotypeScore=139.1695;InbreedingCoeff=0.7267;MQ=47.44;MQ0=32;MQRankSum=-2.823;QD=15.19;ReadPosRankSum=1.821;VQSLOD=3.0737;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:23.97:0,24,372	1/1:4,4:7:9.03:117,9,0	0/0:29,0:9:9.70:0,10,96	0/0:30,0:9:10.74:0,11,127	0/0:34,0:32:93.28:0,93,2046	1/1:6,2:7:3.01:48,3,0	1/1:8,4:11:8.99:74,9,0	0/0:29,0:25:52.59:0,53,600	0/1:15,0:14:56.48:56,0,129	1/1:11,6:15:42.12:596,42,0	1/1:9,5:14:23.94:298,24,0	1/1:5,3:8:18:201,18,0	0/0:17,0:16:36.19:0,36,724	1/1:4,3:7:9:99,9,0	1/1:4,5:9:9:79,9,0	1/1:5,5:10:18.03:251,18,0	1/1:11,4:16:32.92:379,33,0	1/1:8,0:6:9.49:112,9,0	0/1:8,2:5:68.87:150,0,69	1/1:12,5:16:18.02:242,18,0	1/1:24,4:25:11.90:139,12,0	1/1:13,9:20:8.75:90,9,0	0/0:23,0:23:58.80:0,59,1332	0/0:51,0:51:99:0,141,3355	1/1:8,6:14:17.63:206,18,0	1/1:9,4:9:23.98:280,24,0	1/1:5,3:8:17.99:202,18,0	1/1:0,3:3:9.03:163,9,0
chr10	64991476	.	CAG	C	1980.12	PASS	AB=0.894;AC=35;AF=0.648;AN=54;BaseQRankSum=11.325;DP=485;FS=4.551;HRun=0;HaplotypeScore=149.3773;InbreedingCoeff=0.5513;MQ=41.18;MQ0=34;MQRankSum=-7.301;QD=7.53;ReadPosRankSum=0.551;VQSLOD=3.4255;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:27:41:41,0,364	1/1:6,4:9:13.65:78,14,0	0/0:17,0:1:3.01:0,3,32	0/0:21,0:3:6:0,6,53	0/0:37,0:35:99:0,102,1670	./.	0/0:11,4:13:1.20:0,1,3	0/0:35,0:31:77.90:0,78,1061	1/1:12,0:11:14.52:69,15,0	1/1:14,5:17:46.23:388,46,0	1/1:9,5:14:14.22:143,14,0	1/1:3,3:6:11.87:119,12,0	0/0:15,0:14:37.90:0,38,467	1/1:6,3:8:3.95:40,4,0	1/1:4,5:9:2.88:15,3,0	1/1:2,5:7:12.04:156,12,0	1/1:14,4:18:18.45:203,18,0	1/1:9,0:7:14.88:117,15,0	0/1:13,2:7:36.33:144,0,36	1/1:12,4:15:8.93:65,9,0	1/1:26,5:24:5.96:47,6,0	1/1:11,9:18:3:42,3,0	0/0:21,0:20:45.61:0,46,824	0/0:51,0:51:99:0,138,2474	1/1:7,6:13:9.41:87,9,0	0/1:12,4:11:11.27:157,0,11	1/1:5,3:8:17.54:126,18,0	1/1:0,3:3:9.03:129,9,0
chr10	64991478	.	G	GAC	742.26	PASS	AB=0.973;AC=18;AF=0.333;AN=54;BaseQRankSum=5.360;DP=490;FS=26.567;HRun=0;HaplotypeScore=162.0172;InbreedingCoeff=0.3166;MQ=40.43;MQ0=35;MQRankSum=-5.238;QD=4.12;ReadPosRankSum=-3.722;VQSLOD=0.1964;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:23:28.63:0,29,333	1/1:12,0:11:5.80:45,6,0	0/0:16,0:1:3:0,3,26	0/0:20,0:3:3.01:0,3,31	0/0:36,0:34:78.25:0,78,989	./.	1/1:14,0:12:2.03:19,2,0	0/0:38,0:34:75.45:0,75,768	0/0:13,0:12:4.51:0,5,13	0/1:18,1:17:12.73:211,0,13	0/0:12,1:13:4.17:0,4,13	1/1:6,0:6:2.49:22,2,0	0/0:15,0:14:26.92:0,27,312	0/0:7,1:7:0.35:0,0,1	1/1:9,1:10:1.25:3,1,0	0/0:8,0:8:2.66:0,3,7	0/1:19,0:19:27.24:59,0,27	1/1:9,1:8:12.51:167,13,0	0/1:16,0:7:38.19:127,0,38	0/1:16,0:15:0:0,0,0	0/1:29,2:24:0:0,0,0	0/0:19,2:19:2.19:0,2,7	0/0:21,0:20:39.05:0,39,496	0/0:50,0:50:99:0,126,1570	0/0:13,0:13:1.88:0,2,7	0/1:17,1:12:29.38:118,0,29	1/1:8,1:8:13.65:118,14,0	0/0:3,0:3:7.36:0,7,26
chr10	64991488	.	CAG	C	592.30	PASS	AB=0.983;AC=25;AF=0.446;AN=56;BaseQRankSum=10.614;DP=511;FS=16.916;HRun=0;HaplotypeScore=166.8986;InbreedingCoeff=0.0934;MQ=39.43;MQ0=34;MQRankSum=-7.277;QD=2.34;ReadPosRankSum=2.067;VQSLOD=1.5202;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:23.44:0,23,585	0/1:12,1:12:25.37:67,0,25	0/0:11,0:1:3:0,3,26	0/0:14,0:1:3.01:0,3,57	0/0:37,0:35:78.20:0,78,1532	0/0:12,0:10:8.57:0,9,45	0/1:19,1:18:51.90:52,0,58	0/0:42,0:38:99:0,100,1407	1/1:14,0:13:11.17:60,11,0	1/1:17,1:16:8.86:174,9,0	1/1:12,1:13:9.23:39,9,0	0/1:8,0:8:5.64:30,0,6	0/0:12,0:11:30.05:0,30,469	1/1:9,0:7:3.40:18,3,0	1/1:9,0:9:1.25:3,1,0	0/1:8,0:8:16.41:16,0,25	0/1:27,0:25:23.13:23,0,83	0/1:8,0:6:6.33:67,0,6	0/1:20,0:9:47.41:47,0,57	0/1:16,0:15:8.27:27,0,8	0/0:30,1:23:0.92:0,1,2	1/1:22,0:18:2.68:11,3,0	0/0:19,0:18:18.29:0,18,729	0/0:50,0:50:99:0,138,2423	0/1:14,1:14:1.74:20,0,2	0/1:16,0:11:23.48:23,0,107	0/1:14,0:12:37.73:56,0,38	1/1:3,0:3:7.31:26,7,0
chr10	64991496	.	CAG	C	1341.67	PASS	AB=0.990;AC=28;AF=0.538;AN=52;BaseQRankSum=11.723;DP=538;FS=3.605;HRun=0;HaplotypeScore=165.9827;InbreedingCoeff=0.1043;MQ=39.58;MQ0=35;MQRankSum=-3.516;QD=4.14;ReadPosRankSum=-2.337;VQSLOD=2.7536;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:26:49.82:220,50,0	0/1:13,0:12:24.50:29,0,24	./.	0/0:23,1:2:0.68:0,1,38	0/0:36,0:34:66.85:0,67,1426	0/1:14,0:13:3.58:51,0,4	0/1:21,0:18:22.75:83,0,23	0/0:46,0:44:57.38:0,57,386	1/1:5,8:12:14.75:204,15,0	1/1:17,0:16:12.12:159,12,0	0/1:13,0:13:9.37:26,0,9	0/1:8,0:8:4.48:70,0,4	0/0:12,0:11:27.09:0,27,448	1/1:8,0:6:3.37:17,3,0	./.	1/1:9,0:9:11.27:56,11,0	0/1:28,0:25:15.87:98,0,16	0/1:8,0:6:3.25:44,0,3	0/1:21,0:13:59.41:75,0,59	0/1:15,1:14:8.78:64,0,9	1/1:33,0:26:9.66:47,10,0	0/1:22,0:18:12.30:13,0,12	0/0:20,0:19:39.80:0,40,675	0/0:49,0:49:99:0,132,2341	1/1:14,0:13:10.87:56,11,0	0/1:16,1:11:31.02:69,0,31	0/1:16,0:14:1.15:65,0,1	1/1:6,0:6:15.69:65,16,0
chr10	64991500	.	C	CAG	1352.98	PASS	AB=1.000;AC=3;AF=0.058;AN=52;BaseQRankSum=-0.893;DP=552;FS=3.336;HRun=0;HaplotypeScore=169.8728;InbreedingCoeff=0.4010;MQ=41.63;MQ0=35;MQRankSum=-6.961;QD=23.74;ReadPosRankSum=-3.137;VQSLOD=3.6391;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:27:58.23:0,58,674	0/0:13,0:12:14.11:0,14,122	./.	0/0:25,0:3:2.98:0,3,22	0/0:35,0:33:86.54:0,87,1206	0/0:15,0:14:16.04:0,16,138	0/0:22,0:19:26.94:0,27,249	1/1:10,33:41:99:1431,102,0	0/1:14,0:13:25.71:26,0,26	0/0:22,0:20:46.12:0,46,344	0/0:13,0:13:11.97:0,12,100	0/0:7,0:7:11.32:0,11,103	0/0:12,0:11:30.56:0,31,437	0/0:8,0:6:2.85:0,3,21	./.	0/0:10,0:10:9.41:0,9,82	0/0:28,0:25:33.54:0,34,319	0/0:10,0:8:15.88:0,16,118	0/0:22,0:15:29.53:0,30,247	0/0:16,0:14:8.30:0,8,58	0/0:36,0:29:11.77:0,12,72	0/0:22,0:18:8.81:0,9,73	0/0:20,0:19:44.31:0,44,617	0/0:49,0:49:99:0,132,1902	0/0:14,0:13:11.68:0,12,94	0/0:18,0:12:12.45:0,12,209	0/0:14,0:12:19.93:0,20,156	0/0:6,0:6:16.05:0,16,120
chr10	64991510	.	CAG	C	1660.66	PASS	AB=1.000;AC=30;AF=0.556;AN=54;BaseQRankSum=7.309;DP=563;FS=4.199;HRun=0;HaplotypeScore=156.1334;InbreedingCoeff=0.0884;MQ=45.10;MQ0=37;MQRankSum=-2.083;QD=4.00;ReadPosRankSum=-0.540;VQSLOD=2.7103;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:26:54.74:236,55,0	0/1:11,0:10:13.06:26,0,13	0/1:25,0:2:0.84:1,0,20	0/1:29,0:10:54.29:54,0,60	0/0:33,0:31:54.26:0,54,1246	1/1:15,0:14:8.61:59,9,0	0/1:22,0:20:6.08:46,0,6	1/1:32,5:35:77.38:554,77,0	1/1:14,0:13:5.81:39,6,0	0/1:21,0:20:14.77:113,0,15	0/0:15,0:15:8.26:0,8,25	0/1:10,0:10:11.06:63,0,11	0/0:13,0:12:7.70:0,8,384	0/0:8,0:6:0.56:0,1,2	./.	1/1:12,0:12:2.49:34,2,0	0/1:34,0:31:61.11:77,0,61	1/1:11,0:9:18.63:105,19,0	0/1:22,0:17:61.10:105,0,61	1/1:15,0:13:0.60:51,1,0	1/1:37,0:31:21.10:97,21,0	0/1:19,0:14:2.98:3,0,9	0/0:22,0:21:35.24:0,35,559	0/0:46,0:46:99:0,100,1697	0/1:13,0:12:0.74:13,0,1	0/1:18,0:13:47.17:54,0,47	1/1:14,0:12:13.43:76,13,0	0/1:9,0:9:18.20:20,0,18
chr10	64991512	.	GAC	G	3700.72	PASS	AB=0.742;AC=37;AF=0.685;AN=54;BaseQRankSum=7.956;DP=559;FS=7.348;HRun=0;HaplotypeScore=143.2733;InbreedingCoeff=0.2050;MQ=45.30;MQ0=35;MQRankSum=-3.791;QD=9.16;ReadPosRankSum=-0.922;VQSLOD=2.9285;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,17:27:48.85:689,49,0	0/1:3,8:10:11.14:94,0,11	0/0:28,0:3:2.02:0,2,55	0/0:26,0:9:13.02:0,13,132	0/0:32,0:30:60.20:0,60,951	1/1:2,13:14:6.76:163,7,0	0/1:15,7:20:9.14:228,0,9	1/1:38,0:36:0.44:85,0,0	1/1:12,1:13:8.08:66,8,0	1/1:12,9:20:12.04:424,12,0	0/0:6,8:14:2.60:0,3,10	1/1:8,3:11:12.01:198,12,0	0/1:12,2:13:37.51:38,0,364	1/1:2,6:6:0.47:1,0,0	./.	1/1:2,8:10:9.02:102,9,0	0/1:9,24:31:21.29:209,0,21	0/1:6,5:9:6.14:136,0,6	1/1:8,13:17:30.92:337,31,0	1/1:12,4:14:0.65:64,1,0	1/1:25,11:30:2.10:258,2,0	0/1:13,6:14:6.21:30,0,6	0/1:20,1:21:15.28:15,0,399	0/0:42,2:44:19.21:0,19,1196	1/1:7,6:12:6.02:71,6,0	1/1:12,6:13:17.83:179,18,0	1/1:2,12:12:17.76:209,18,0	1/1:3,6:9:9.03:106,9,0
chr10	64991664	.	GA	G	2492.01	PASS	AB=0.881;AC=21;AF=0.375;AN=56;BaseQRankSum=-0.339;DP=607;FS=8.833;HRun=2;HaplotypeScore=149.6466;InbreedingCoeff=-0.4479;MQ=44.35;MQ0=27;MQRankSum=-5.237;QD=5.56;ReadPosRankSum=3.843;VQSLOD=0.3667;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:17,2:15:10.36:0,10,152	0/1:5,2:7:32.87:98,0,33	0/0:18,1:7:12.45:0,12,118	0/1:46,0:14:7.20:7,0,162	0/0:20,0:20:57.18:0,57,814	0/1:33,0:30:99:104,0,165	0/1:17,5:18:27.84:28,0,196	1/1:20,12:26:31.97:610,32,0	0/1:18,4:21:99:142,0,185	0/1:22,6:24:99:263,0,125	0/1:10,5:14:13.34:91,0,13	0/1:17,2:19:24.79:104,0,25	0/0:19,0:19:54.13:0,54,748	0/1:8,2:10:24.78:25,0,55	0/1:14,5:19:32.65:33,0,91	0/1:24,0:23:14.68:15,0,112	0/1:12,0:10:37.04:37,0,53	0/1:27,1:25:99:221,0,143	0/1:35,0:33:99:326,0,277	0/1:10,8:17:89.15:89,0,100	0/1:12,1:11:9.81:10,0,78	0/0:24,0:21:4.77:0,5,112	0/0:18,0:18:47.17:0,47,643	0/0:22,0:22:57.19:0,57,844	0/1:23,5:22:72.04:104,0,72	0/1:27,3:26:99:308,0,285	0/0:18,0:18:14.88:0,15,137	0/1:5,1:6:20.34:40,0,20
chr10	64991665	.	A	AG	4227.99	PASS	AB=0.742;AC=23;AF=0.411;AN=56;BaseQRankSum=-1.518;DP=609;FS=3.685;HRun=1;HaplotypeScore=149.1645;InbreedingCoeff=-0.4494;MQ=44.02;MQ0=28;MQRankSum=-5.048;QD=9.40;ReadPosRankSum=2.571;VQSLOD=2.8491;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:9,10:15:10.88:0,11,180	0/1:4,1:7:25.95:116,0,26	0/0:18,0:6:12.45:0,12,117	0/0:44,0:14:4.85:0,5,199	0/0:19,0:19:57.18:0,57,771	0/1:12,3:30:99:167,0,190	0/1:15,5:18:64.73:65,0,200	1/1:28,11:32:41.57:795,42,0	0/1:14,8:21:99:175,0,182	0/1:16,7:23:75.10:423,0,75	1/1:9,3:14:1.84:111,2,0	0/1:9,7:18:14.86:145,0,15	0/0:18,0:18:49.67:0,50,683	0/1:5,4:10:35.93:36,0,37	0/1:15,2:19:60.24:60,0,97	0/1:6,3:23:83.69:90,0,84	0/1:4,8:10:40.97:72,0,41	0/1:10,13:25:99:330,0,125	0/1:17,7:35:99:594,0,254	0/1:17,0:17:96.92:139,0,97	0/1:10,1:12:39.89:40,0,73	0/1:11,3:21:25.12:25,0,95	0/0:18,0:18:48.10:0,48,623	0/0:21,1:22:57.19:0,57,792	0/1:13,9:21:68.32:240,0,68	0/1:15,9:26:99:515,0,192	0/1:5,0:17:9.11:9,0,122	0/1:4,2:6:23.71:83,0,24
chr10	64991683	.	G	GAGAGAGA	13291.61	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=2.195;DP=607;FS=14.329;HRun=0;HaplotypeScore=171.7051;InbreedingCoeff=0.9528;MQ=50.43;MQ0=20;MQRankSum=-7.171;QD=32.11;ReadPosRankSum=-1.200;VQSLOD=3.5222;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:14:10.46:0,10,351	1/1:7,1:8:12.04:256,12,0	0/0:27,0:13:14.43:0,14,322	0/0:46,0:19:19.56:0,20,235	0/0:22,0:22:48.13:0,48,923	1/1:28,3:28:42.13:979,42,0	1/1:17,2:18:17.99:450,18,0	1/1:45,0:39:54.99:256,55,0	0/0:20,0:19:17.14:0,17,273	1/1:19,2:20:42.11:1108,42,0	1/1:11,3:14:24.08:588,24,0	1/1:19,3:22:38.96:824,39,0	0/0:18,0:18:36.12:0,36,772	1/1:9,3:12:24.07:497,24,0	1/1:13,6:19:33.10:916,33,0	1/1:19,4:23:48.50:1152,49,0	1/1:7,2:7:15.05:366,15,0	1/1:28,1:27:22.78:826,23,0	1/1:39,1:37:40.27:648,40,0	1/1:11,5:15:21.54:612,22,0	1/1:8,7:14:6.02:161,6,0	1/1:13,5:17:27.09:787,27,0	0/0:19,0:19:42.14:0,42,891	0/0:22,0:22:30.10:0,30,661	1/1:14,4:14:21.05:522,21,0	1/1:25,7:29:54.16:1421,54,0	1/1:15,1:16:30.06:621,30,0	1/1:5,1:6:12.03:300,12,0
chr10	64991685	.	GAGAGA	G	1563.21	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-0.087;DP=620;FS=9.228;HRun=0;HaplotypeScore=193.1851;InbreedingCoeff=0.9204;MQ=51.43;MQ0=20;MQRankSum=-2.897;QD=34.74;ReadPosRankSum=-4.413;VQSLOD=1.7002;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:14:28.30:0,28,700	0/0:9,0:9:20.32:0,20,219	0/0:28,0:15:39.60:0,40,858	0/0:46,0:19:35.55:0,36,601	0/0:22,0:22:57.19:0,57,1617	0/0:31,0:28:60.86:0,61,718	0/0:19,0:18:34.56:0,35,563	1/1:16,29:39:99:1658,102,0	0/0:20,0:19:33.62:0,34,752	0/0:23,0:22:43.42:0,43,683	0/0:14,0:14:26.15:0,26,192	0/0:22,0:22:41.82:0,42,366	0/0:17,0:17:48.16:0,48,1383	0/0:12,0:12:26.90:0,27,333	0/0:19,0:19:41.95:0,42,487	0/0:23,0:23:54.74:0,55,672	0/0:9,0:7:18.24:0,18,264	0/0:32,0:30:48.86:0,49,1107	0/0:44,0:41:99:0,110,1726	0/0:16,0:15:28.72:0,29,272	0/0:17,0:15:21:0,21,355	0/0:19,0:18:38.27:0,38,439	0/0:19,0:19:54.18:0,54,1598	0/0:23,0:23:51.09:0,51,1296	0/0:17,0:13:32.42:0,32,396	0/0:33,0:30:78.99:0,79,1301	0/0:15,0:15:38.12:0,38,461	0/0:6,0:6:8.48:0,8,58
chr10	64991690	.	A	AG	380.93	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=0.585;DP=619;FS=4.996;HRun=1;HaplotypeScore=165.7781;InbreedingCoeff=0.8713;MQ=54.09;MQ0=20;MQRankSum=-1.665;QD=8.86;ReadPosRankSum=-5.038;VQSLOD=-0.7299;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:13:23.88:0,24,334	0/0:9,0:9:20.71:0,21,253	0/0:33,0:17:42.61:0,43,562	0/0:51,0:23:47.12:0,47,512	0/0:21,0:21:60.20:0,60,834	0/0:31,0:28:65.49:0,65,659	0/0:18,1:18:38.81:0,39,427	1/1:43,0:37:10.72:466,11,0	0/0:19,0:18:36.94:0,37,447	0/0:24,0:23:60.02:0,60,575	0/0:14,0:14:27.33:0,27,249	0/0:21,0:21:47.54:0,48,523	0/0:16,0:16:48.16:0,48,664	0/0:12,0:12:26.01:0,26,227	0/0:19,0:19:40.98:0,41,356	0/0:21,0:21:55.81:0,56,453	0/0:10,0:8:23.81:0,24,259	0/0:32,0:30:14.15:0,14,781	0/0:45,0:42:99:0,113,1351	0/0:15,0:14:29.70:0,30,290	0/0:16,1:15:21:0,21,234	0/0:18,0:17:40.80:0,41,357	0/0:18,0:18:54.18:0,54,753	0/0:21,2:23:57.10:0,57,745	0/0:17,0:13:31.92:0,32,323	0/0:34,0:31:89.04:0,89,901	0/0:14,0:14:38.70:0,39,411	0/0:6,0:6:8.89:0,9,78
chr10	64991895	.	GTCAGCCA	G	84.06	PASS	AB=0.606;AC=1;AF=0.018;AN=56;BaseQRankSum=3.624;DP=625;FS=2.563;HRun=0;HaplotypeScore=163.9822;InbreedingCoeff=-0.0113;MQ=72.43;MQ0=4;MQRankSum=1.513;QD=4.20;ReadPosRankSum=-1.776;VQSLOD=1.8864;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:20:44.24:0,44,401	0/0:9,0:9:20.98:0,21,238	0/0:30,0:27:40.33:0,40,493	0/0:23,0:20:44.18:0,44,569	0/0:10,0:10:30.04:0,30,367	0/0:16,0:15:28.30:0,28,356	0/0:26,0:26:74.72:0,75,830	0/1:7,13:19:23.50:159,0,23	0/0:33,0:33:83.55:0,84,954	0/0:26,0:26:57.23:0,57,748	0/0:10,0:10:26.75:0,27,240	0/0:33,0:32:80.97:0,81,1034	0/0:21,0:21:57.09:0,57,980	0/0:31,0:31:69.62:0,70,873	0/0:11,0:11:20.99:0,21,244	0/0:15,0:15:38.95:0,39,511	0/0:28,0:25:47.56:0,48,624	0/0:29,0:28:67.35:0,67,1057	0/0:23,0:23:50.97:0,51,575	0/0:14,0:14:39.04:0,39,522	0/0:77,0:73:99:0,153,1606	0/0:9,0:8:15.83:0,16,136	0/0:6,0:6:18.01:0,18,214	0/0:40,0:40:99:0,114,2192	0/0:16,0:15:36.61:0,37,389	0/0:22,0:22:56.95:0,57,619	0/0:19,0:19:36.28:0,36,327	0/0:6,0:6:18.02:0,18,277
chr10	64992813	.	A	AT	884.26	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-7.817;DP=534;FS=7.507;HRun=7;HaplotypeScore=49.5659;InbreedingCoeff=0.9868;MQ=78.67;MQ0=0;MQRankSum=-0.050;QD=27.63;ReadPosRankSum=-5.215;VQSLOD=1.6791;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,105,1014	0/0:6,0:6:18.03:0,18,174	0/0:16,0:16:36.26:0,36,363	0/0:15,0:14:20.95:0,21,192	0/0:17,0:17:45.07:0,45,435	0/0:25,0:25:69.10:0,69,666	0/0:16,0:16:42.07:0,42,405	1/1:4,28:32:84.22:979,84,0	0/0:16,0:16:42.06:0,42,406	0/0:27,0:27:69.10:0,69,666	0/0:14,0:14:36.06:0,36,348	0/0:12,0:12:30.04:0,30,290	0/0:14,0:14:39.05:0,39,371	0/0:14,0:14:36.05:0,36,348	0/0:19,0:19:57.09:0,57,550	0/0:16,0:16:48.08:0,48,464	0/0:25,0:25:69.09:0,69,659	0/0:19,0:19:57.03:0,57,535	0/0:20,0:20:48.07:0,48,464	0/0:23,0:23:60.09:0,60,579	0/0:18,0:18:54.09:0,54,521	0/0:20,0:20:51.08:0,51,492	0/0:17,0:17:39.05:0,39,376	0/0:19,0:19:48.07:0,48,464	0/0:15,0:15:42.07:0,42,406	0/0:16,0:16:45.07:0,45,435	0/0:27,0:25:78.13:0,78,753	0/0:18,0:18:48.08:0,48,463
chr10	64994654	.	T	TA	6011.36	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=-2.938;DP=424;FS=0.000;HRun=2;HaplotypeScore=61.0353;InbreedingCoeff=0.9579;MQ=76.61;MQ0=2;MQRankSum=-3.006;QD=18.90;ReadPosRankSum=1.768;VQSLOD=4.7592;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,25:30:18.04:202,18,0	1/1:9,0:9:23.60:178,24,0	0/0:25,0:21:26.59:0,27,323	0/0:15,0:12:22.09:0,22,169	0/0:12,0:12:29.74:0,30,218	1/1:17,0:17:50.45:394,50,0	1/1:16,0:15:41.40:315,41,0	0/0:19,0:19:44.63:0,45,345	1/1:12,1:13:35.99:317,36,0	1/1:14,0:14:35.97:318,36,0	1/1:8,0:8:24:210,24,0	1/1:14,0:14:35.67:297,36,0	0/0:12,0:12:23.17:0,23,159	1/1:11,0:11:5.84:123,6,0	1/1:16,0:16:47.53:366,48,0	1/1:22,1:23:48.77:461,49,0	1/1:20,1:20:56.24:443,56,0	1/1:22,0:22:59.36:386,59,0	1/1:15,0:15:44.83:378,45,0	1/1:13,0:13:23.30:218,23,0	1/1:31,1:32:72.41:579,72,0	1/1:9,1:9:17.83:133,18,0	0/0:4,0:4:11.99:0,12,100	0/0:19,0:19:41.89:0,42,333	1/1:5,0:5:11.98:102,12,0	1/1:13,0:13:32.79:282,33,0	1/1:11,1:12:30.99:220,31,0	1/1:4,0:4:11.87:86,12,0
chr10	64994667	.	CCCCA	C	78.10	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=0.153;DP=389;FS=0.000;HRun=0;HaplotypeScore=84.4997;InbreedingCoeff=0.5585;MQ=81.00;MQ0=2;MQRankSum=3.376;QD=5.21;ReadPosRankSum=0.037;VQSLOD=1.6002;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:38.82:0,39,416	0/0:10,0:10:12.17:0,12,77	0/0:27,0:22:15.41:0,15,719	0/0:17,0:14:22.67:0,23,275	0/0:10,0:10:8.98:0,9,73	0/0:14,0:14:18.48:0,18,210	0/0:16,0:15:21.74:0,22,203	1/1:4,8:12:17.89:168,18,0	0/0:18,0:18:26.35:0,26,249	0/0:9,0:9:8.85:0,9,72	0/0:5,0:5:3:0,3,25	0/0:10,0:10:17.62:0,18,114	0/0:14,0:14:24.45:0,24,203	0/0:9,0:9:23.82:0,24,246	0/0:16,0:16:32.83:0,33,316	0/0:23,0:23:32.13:0,32,464	0/0:21,0:20:44.65:0,45,420	0/0:24,0:24:57.20:0,57,619	0/0:15,0:15:29.43:0,29,247	0/0:7,0:7:6.01:0,6,67	0/0:27,0:27:36.37:0,36,373	0/0:7,0:6:9.47:0,9,104	0/0:6,0:6:11.99:0,12,146	0/0:21,0:21:41.93:0,42,438	0/1:3,0:3:0:0,0,0	0/0:8,0:8:11.87:0,12,99	0/0:15,0:15:26.76:0,27,246	0/0:2,0:2:2.98:0,3,21
chr10	64994669	.	C	CA	243.43	PASS	AB=0.925;AC=6;AF=0.111;AN=54;BaseQRankSum=0.928;DP=350;FS=4.627;HRun=0;HaplotypeScore=80.1200;InbreedingCoeff=0.1563;MQ=82.32;MQ0=2;MQRankSum=-2.541;QD=3.25;ReadPosRankSum=-0.620;VQSLOD=2.5027;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:19:32.74:294,33,0	0/1:8,0:8:3.74:4,0,68	0/0:27,0:22:26.10:0,26,290	0/0:15,0:12:12.35:0,12,117	0/0:8,0:8:3:0,3,26	0/0:10,0:11:15.71:0,16,111	0/1:12,0:11:5.78:6,0,73	0/0:9,0:9:10.15:0,10,73	0/1:12,9:21:19.55:49,0,20	0/0:8,0:8:6:0,6,56	0/0:1,0:1:3:0,3,26	0/0:8,0:8:5.90:0,6,42	0/1:15,0:15:3.03:3,0,83	0/0:10,0:10:17.67:0,18,113	0/0:15,0:15:26.66:0,27,191	0/0:20,0:20:42.39:0,42,283	0/0:19,0:18:34.95:0,35,234	0/0:21,0:21:50.24:0,50,334	0/0:14,0:14:25.84:0,26,191	0/0:7,0:7:5.94:0,6,43	0/0:23,0:23:36.04:0,36,262	0/0:6,0:5:8.79:0,9,51	0/0:4,0:4:4.25:0,4,30	0/0:22,0:22:33.84:0,34,265	./.	0/0:7,0:7:8.84:0,9,61	0/0:16,0:16:20.81:0,21,152	0/0:3,0:3:2.90:0,3,16
chr10	64995546	.	TTGTG	T	5088.34	PASS	AB=0.833;AC=39;AF=0.750;AN=52;BaseQRankSum=5.734;DP=592;FS=2.087;HRun=0;HaplotypeScore=99.8854;InbreedingCoeff=0.8134;MQ=58.48;MQ0=22;MQRankSum=0.247;QD=12.95;ReadPosRankSum=1.059;VQSLOD=4.4240;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:29:3:28,3,0	1/1:4,5:9:15:209,15,0	./.	./.	0/0:25,0:25:45.56:0,46,806	1/1:15,15:30:24:348,24,0	1/1:16,11:28:8.79:122,9,0	0/0:40,0:36:33.11:0,33,502	0/0:10,0:22:23.60:0,24,378	1/1:18,15:33:48.12:710,48,0	1/1:9,12:22:24.90:271,25,0	1/1:7,8:15:17.93:252,18,0	0/0:13,0:12:15.05:0,15,350	1/1:6,10:15:12.04:189,12,0	1/1:7,9:15:15.05:237,15,0	1/1:6,9:15:15.05:237,15,0	1/1:13,14:26:33.11:521,33,0	1/1:7,0:10:8.04:62,8,0	0/1:12,3:13:3.59:121,0,4	1/1:11,11:22:29.14:389,29,0	1/1:13,5:15:5.97:95,6,0	1/1:2,5:8:9.02:122,9,0	0/0:21,0:23:44.44:0,44,808	0/0:28,0:31:41.60:0,42,764	1/1:10,6:16:12.79:158,13,0	1/1:9,7:16:21.05:305,21,0	1/1:6,19:25:30.99:475,31,0	1/1:10,11:21:14.95:237,15,0
chr10	64995969	.	AG	A	9245.04	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=5.843;DP=530;FS=24.454;HRun=7;HaplotypeScore=68.6872;InbreedingCoeff=0.9950;MQ=82.38;MQ0=0;MQRankSum=-6.440;QD=23.71;ReadPosRankSum=2.031;VQSLOD=3.3155;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,39:43:99:1077,107,0	1/1:0,9:9:21.05:214,21,0	0/0:21,0:21:29.53:0,30,438	0/0:16,0:16:35.23:0,35,397	0/0:20,0:20:48.04:0,48,552	1/1:1,18:19:48.10:488,48,0	1/1:1,24:25:63.14:642,63,0	1/1:2,12:14:36.04:348,36,0	1/1:3,22:25:63.14:643,63,0	1/1:3,17:20:51.11:519,51,0	1/1:6,11:17:26.95:274,27,0	1/1:3,23:26:66.11:658,66,0	0/0:32,0:32:87.25:0,87,1061	1/1:2,10:12:33.05:323,33,0	1/1:1,11:12:30.06:304,30,0	1/1:2,7:9:21.04:213,21,0	1/1:0,18:18:48.11:490,48,0	1/1:1,8:9:24.05:245,24,0	1/1:2,9:11:27.05:271,27,0	1/1:4,16:20:30.06:305,30,0	1/1:1,29:30:66.15:673,66,0	1/1:5,7:12:21.05:213,21,0	0/0:17,0:17:45.13:0,45,547	0/0:34,0:34:87.28:0,87,1094	1/1:5,13:18:39.08:398,39,0	1/1:3,15:18:48.10:489,48,0	1/1:6,10:16:24.05:244,24,0	1/1:0,7:7:21.05:214,21,0
chr10	64997317	.	T	TA	886.99	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-8.488;DP=533;FS=4.654;HRun=8;HaplotypeScore=51.3037;InbreedingCoeff=0.9393;MQ=79.38;MQ0=0;MQRankSum=-0.202;QD=28.61;ReadPosRankSum=-4.587;VQSLOD=2.1799;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:66.02:0,66,603	0/0:4,0:4:9:0,9,82	0/0:15,0:14:21:0,21,192	0/0:17,0:17:33.88:0,34,255	0/0:22,0:22:63.03:0,63,577	0/0:29,0:29:78.03:0,78,713	0/0:11,0:11:30.02:0,30,274	1/1:2,29:31:87.23:982,87,0	0/0:22,0:22:57.03:0,57,522	0/0:24,0:24:69:0,69,624	0/0:25,0:25:69.04:0,69,631	0/0:19,0:19:50.98:0,51,458	0/0:21,0:21:60.02:0,60,545	0/0:16,0:16:42.02:0,42,384	0/0:22,0:22:54.01:0,54,494	0/0:17,0:17:51.01:0,51,461	0/0:20,0:20:42.01:0,42,384	0/0:13,0:13:36.02:0,36,330	0/0:16,0:16:45.02:0,45,412	0/0:20,0:20:57.02:0,57,517	0/0:12,0:12:33.02:0,33,302	0/0:23,0:23:63.03:0,63,576	0/0:17,0:17:51.03:0,51,466	0/0:10,0:10:27.01:0,27,247	0/0:21,0:21:57.03:0,57,522	0/0:23,0:23:63.02:0,63,573	0/0:25,0:24:66.02:0,66,599	0/0:13,0:13:39.02:0,39,357
chr10	64998619	.	GGAAT	G	4370.56	PASS	AB=0.500;AC=39;AF=0.750;AN=52;BaseQRankSum=5.429;DP=303;FS=5.321;HRun=0;HaplotypeScore=64.6611;InbreedingCoeff=0.7329;MQ=71.55;MQ0=0;MQRankSum=-5.981;QD=22.88;ReadPosRankSum=1.901;VQSLOD=4.0265;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,18:20:18.02:296,18,0	1/1:1,2:3:3.01:55,3,0	0/0:17,0:14:30.87:0,31,787	0/0:22,0:17:48.06:0,48,1121	0/0:12,0:12:33.11:0,33,843	1/1:2,7:9:6.02:110,6,0	1/1:1,14:15:33.07:572,33,0	1/1:3,16:19:48.06:806,48,0	1/1:7,1:8:12.01:160,12,0	1/1:0,3:3:9.03:161,9,0	0/1:0,4:4:0:0,0,0	1/1:2,6:8:5.57:71,6,0	0/0:14,0:14:36.02:0,36,838	1/1:2,5:7:3.01:55,3,0	1/1:2,4:6:9.03:147,9,0	1/1:3,5:8:15:212,15,0	1/1:1,11:12:3.01:55,3,0	1/1:0,5:5:6.02:110,6,0	1/1:2,7:9:18.04:300,18,0	1/1:1,1:2:3.01:55,3,0	1/1:3,31:34:37.21:609,37,0	1/1:0,4:4:6:79,6,0	0/0:10,0:10:27.09:0,27,708	0/0:34,0:34:87.21:0,87,2174	./.	1/1:1,6:7:18.06:331,18,0	1/1:1,7:8:12.01:186,12,0	./.
chr10	64998803	.	G	GC	625.38	PASS	AB=0.827;AC=30;AF=0.577;AN=52;BaseQRankSum=-4.223;DP=146;FS=12.685;HRun=12;HaplotypeScore=26.6407;InbreedingCoeff=0.1832;MQ=80.65;MQ0=1;MQRankSum=0.222;QD=6.01;ReadPosRankSum=-2.082;VQSLOD=-0.1148;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:11:12.21:0,12,35	0/1:0,1:1:0:0,0,0	0/1:15,0:13:4.27:4,0,39	0/1:7,1:6:19.52:27,0,20	0/0:9,0:9:2.94:0,3,22	1/1:1,2:3:5.92:40,6,0	0/1:7,5:14:70.77:114,0,71	0/0:3,0:3:8.95:0,9,66	1/1:0,4:4:5.99:58,6,0	1/1:2,1:3:3:29,3,0	0/1:2,1:3:0:0,0,0	0/1:2,5:9:4.09:103,0,4	0/1:6,0:6:2.76:3,0,16	1/1:6,1:7:8.88:73,9,0	./.	0/1:4,1:5:15.79:23,0,16	1/1:0,4:4:6.01:58,6,0	1/1:0,1:1:3:29,3,0	0/0:1,0:1:2.98:0,3,21	1/1:3,0:3:3.46:25,3,0	1/1:4,1:5:6:54,6,0	0/1:4,0:4:13.66:23,0,14	0/0:6,0:7:5.93:0,6,43	0/0:8,0:9:8.58:0,9,59	1/1:0,1:1:3:29,3,0	0/1:2,0:2:0:0,0,0	1/1:3,3:6:9:78,9,0	./.
chr10	64999294	.	T	TTATGTG	6364.50	PASS	AB=1.000;AC=39;AF=0.696;AN=56;BaseQRankSum=6.029;DP=623;FS=23.382;HRun=0;HaplotypeScore=151.6542;InbreedingCoeff=0.7471;MQ=67.20;MQ0=11;MQRankSum=-2.892;QD=14.43;ReadPosRankSum=-2.718;VQSLOD=2.4833;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:41:86.94:0,87,950	1/1:6,0:6:11.98:119,12,0	0/0:23,0:17:50.99:0,51,480	0/0:25,0:21:35.03:0,35,486	0/0:13,0:17:24.30:0,24,186	1/1:10,14:24:1.21:171,1,0	1/1:30,0:27:62.57:547,63,0	1/1:24,0:23:61.99:534,62,0	0/0:11,0:14:38.78:0,39,384	1/1:2,13:21:60.38:703,60,0	1/1:18,0:18:26.54:319,27,0	1/1:7,0:29:15.05:369,15,0	0/0:13,0:13:35.09:0,35,406	1/1:18,0:18:23.94:270,24,0	1/1:6,22:31:9.03:211,9,0	1/1:1,10:17:14.84:426,15,0	1/1:19,0:19:41.79:434,42,0	1/1:24,0:24:59.54:610,60,0	1/1:21,0:20:44.89:499,45,0	1/1:6,0:23:2.66:12,3,0	1/1:14,0:52:2.14:303,2,0	1/1:3,10:18:2.57:107,3,0	0/0:10,0:10:18.47:0,18,245	0/0:36,0:37:16.57:0,17,1086	1/1:12,0:13:17.87:201,18,0	0/1:21,0:18:28.72:360,0,29	1/1:5,12:19:6.32:56,6,0	1/1:1,0:8:5.93:113,6,0
chr10	64999697	.	G	GTGTGTGTA	1485.45	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=-5.655;DP=611;FS=34.058;HRun=0;HaplotypeScore=169.0497;InbreedingCoeff=-0.0977;MQ=62.65;MQ0=20;MQRankSum=3.622;QD=6.19;ReadPosRankSum=4.903;VQSLOD=1.0586;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:12,29:44:3.45:0,3,23	0/1:6,0:6:59.93:60,0,66	0/0:14,0:9:20.97:0,21,193	0/0:19,0:11:18.37:0,18,162	0/0:16,0:14:20.97:0,21,226	0/1:18,0:17:32.73:102,0,33	0/1:26,0:24:5.48:5,0,50	0/0:22,0:22:49.23:0,49,516	0/1:18,0:18:16.41:52,0,16	0/1:32,0:31:99:297,0,123	0/0:10,0:9:13.84:0,14,88	0/0:31,0:31:28.98:0,29,178	0/0:8,0:8:6.01:0,6,96	0/1:22,0:22:43.76:199,0,44	0/0:23,0:22:5.85:0,6,183	0/0:23,0:22:18.72:0,19,157	0/0:36,0:36:8.33:0,8,198	0/0:34,0:33:16.73:0,17,200	0/1:24,0:24:14.76:247,0,15	0/0:26,0:24:0.93:0,1,95	1/1:33,0:28:7.19:256,7,0	0/0:29,0:28:16.69:0,17,162	0/0:12,0:11:12.01:0,12,211	0/0:23,0:23:41.94:0,42,516	0/1:11,0:11:46.10:46,0,122	0/1:25,0:25:0.35:288,0,0	0/1:15,0:15:15.68:16,0,31	0/1:10,0:10:66.50:66,0,107
chr10	64999699	.	G	GTGTGTA	1780.09	PASS	AB=0.982;AC=19;AF=0.339;AN=56;BaseQRankSum=1.212;DP=619;FS=50.493;HRun=0;HaplotypeScore=152.9535;InbreedingCoeff=-0.2790;MQ=61.49;MQ0=24;MQRankSum=1.842;QD=4.28;ReadPosRankSum=6.829;VQSLOD=0.4748;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:6.37:0,6,38	0/1:6,0:6:48.45:86,0,48	0/0:14,0:9:20.97:0,21,193	0/0:19,0:10:18.56:0,19,163	0/0:16,0:13:20.97:0,21,214	0/1:16,0:15:5.76:115,0,6	0/1:26,0:24:11.12:11,0,28	0/0:23,0:23:48.43:0,48,519	0/1:10,8:18:18.09:76,0,18	0/1:33,0:32:99:287,0,105	0/0:10,0:9:1.11:0,1,46	0/1:31,0:31:26.43:26,0,89	0/0:8,0:8:6.01:0,6,90	0/1:23,0:23:44.78:195,0,45	0/1:22,0:22:30.80:31,0,130	0/1:23,0:22:5.77:6,0,79	0/1:35,0:35:15.19:15,0,116	0/1:34,0:33:65.29:65,0,66	0/1:26,0:26:42.42:242,0,42	0/1:27,0:24:11.28:11,0,47	1/1:33,0:27:21.72:275,22,0	0/0:31,0:29:4.10:0,4,120	0/0:12,0:11:15:0,15,210	0/0:25,0:25:44.95:0,45,502	0/1:12,0:12:50.68:73,0,51	0/1:25,0:25:1.97:299,0,2	0/1:15,0:15:1.03:28,0,1	0/1:10,0:10:47.75:96,0,48
chr10	64999703	.	G	GTA	5196.82	PASS	AB=0.675;AC=30;AF=0.536;AN=56;BaseQRankSum=0.345;DP=625;FS=21.691;HRun=0;HaplotypeScore=103.2946;InbreedingCoeff=0.1630;MQ=58.81;MQ0=27;MQRankSum=1.901;QD=10.21;ReadPosRankSum=6.152;VQSLOD=2.5929;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:43,0:43:1.03:1,0,54	0/1:5,1:6:22.06:108,0,22	0/0:13,0:8:20.97:0,21,193	0/0:17,0:8:17.33:0,17,158	0/0:16,0:13:20.97:0,21,190	1/1:15,2:16:23.60:240,24,0	0/1:6,21:26:0.16:57,0,0	0/0:23,0:23:62.81:0,63,543	0/1:15,0:15:21.45:27,0,21	1/1:7,26:35:50.84:597,51,0	0/1:5,6:10:8.91:125,0,9	0/1:9,23:33:54.19:352,0,54	0/0:7,0:7:8.93:0,9,87	1/1:18,3:22:12.66:368,13,0	0/1:8,16:23:54.08:123,0,54	0/1:6,16:21:17.18:188,0,17	0/1:9,25:35:35.65:257,0,36	1/1:7,28:35:26.10:562,26,0	0/1:6,18:24:46.26:341,0,46	1/1:6,20:23:9.63:176,10,0	1/1:34,1:29:46.44:365,46,0	0/1:8,23:29:75.26:87,0,75	0/0:13,0:12:17.98:0,18,185	0/0:27,0:26:50.42:0,50,454	1/1:8,5:13:13.62:309,14,0	0/1:6,18:24:26.12:476,0,26	1/1:2,13:15:3.29:155,3,0	1/1:6,4:10:11:283,11,0
chr10	64999741	.	G	GTA	6331.45	PASS	AB=0.911;AC=30;AF=0.536;AN=56;BaseQRankSum=4.416;DP=636;FS=7.870;HRun=0;HaplotypeScore=104.8806;InbreedingCoeff=0.2454;MQ=50.60;MQ0=49;MQRankSum=0.024;QD=14.10;ReadPosRankSum=2.040;VQSLOD=3.9896;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:45:39.90:0,40,367	0/1:9,0:7:31.16:107,0,31	0/0:30,0:3:8.92:0,9,63	0/0:32,0:7:20.81:0,21,171	0/0:19,0:17:32.93:0,33,284	0/1:6,16:21:11.48:133,0,11	1/1:24,0:22:16.11:190,16,0	1/1:14,0:12:21.06:215,21,0	0/0:13,0:13:17.14:0,17,114	1/1:28,0:27:41.70:577,42,0	1/1:14,0:12:21.02:254,21,0	1/1:32,0:32:11.23:586,11,0	0/0:7,0:6:8.95:0,9,87	0/1:23,0:22:99:285,0,104	0/1:20,0:19:24.09:199,0,24	0/1:17,0:17:27.86:285,0,28	1/1:33,0:33:28.61:527,29,0	1/1:40,0:38:37.87:756,38,0	0/1:24,0:23:18.62:323,0,19	1/1:20,0:19:18.76:242,19,0	0/1:8,26:32:23.97:141,0,24	0/1:27,1:27:28.69:260,0,29	0/0:13,0:10:17.99:0,18,187	0/0:26,0:25:41.97:0,42,420	0/1:14,0:12:15.13:211,0,15	1/1:24,0:22:4.52:446,5,0	1/1:17,0:16:35.95:373,36,0	0/1:11,0:11:15.88:222,0,16
chr10	65000276	.	T	TGG	922.89	PASS	AB=1.000;AC=34;AF=0.607;AN=56;BaseQRankSum=9.911;DP=628;FS=52.431;HRun=0;HaplotypeScore=157.8118;InbreedingCoeff=0.4398;MQ=84.07;MQ0=0;MQRankSum=-9.014;QD=2.22;ReadPosRankSum=-2.248;VQSLOD=0.6466;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,138,2149	1/1:7,0:7:8.18:25,8,0	0/0:27,0:26:67.41:0,67,991	0/0:28,0:28:80.51:0,81,1125	0/0:21,0:21:60.19:0,60,943	1/1:30,0:30:12.71:52,13,0	1/1:22,0:22:0.37:49,0,0	1/1:6,12:19:29.76:369,30,0	0/0:24,0:24:66.23:0,66,1067	0/1:28,0:28:29.13:44,0,29	0/1:16,0:16:11.51:19,0,12	1/1:22,0:22:0.18:31,0,0	0/0:17,0:17:48.16:0,48,780	1/1:8,0:8:6.30:20,6,0	1/1:20,0:20:13.04:43,13,0	0/1:18,0:18:7.67:36,0,8	1/1:40,0:40:15.98:55,16,0	1/1:27,0:27:4.58:28,5,0	0/1:14,0:14:8.71:9,0,72	1/1:14,0:14:11.57:36,12,0	1/1:24,0:24:11.88:36,12,0	1/1:21,0:21:28.44:96,28,0	0/0:23,0:23:63.19:0,63,960	0/0:26,0:26:78.27:0,78,1255	0/1:23,0:23:29.21:33,0,29	0/1:23,0:23:20.62:21,0,77	1/1:30,0:30:23.38:98,23,0	1/1:9,0:9:5.08:19,5,0
chr10	65000277	.	C	CGCT	24485.86	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-8.735;DP=668;FS=7.356;HRun=0;HaplotypeScore=100.0469;InbreedingCoeff=0.9972;MQ=82.50;MQ0=0;MQRankSum=-10.125;QD=54.17;ReadPosRankSum=2.050;VQSLOD=6.8985;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,129,2263	1/1:1,7:9:21.03:445,21,0	0/0:28,0:27:68.70:0,69,1117	0/0:27,0:28:76.75:0,77,1179	0/0:20,0:20:57.18:0,57,964	1/1:1,29:34:84.29:1983,84,0	1/1:2,20:22:54.19:1274,54,0	1/1:11,0:23:36.10:598,36,0	0/0:24,0:24:72.20:0,72,1183	1/1:2,27:30:90.29:2009,90,0	1/1:1,14:15:42.14:991,42,0	1/1:1,21:23:57.20:1346,57,0	0/0:18,0:18:48.16:0,48,844	1/1:0,8:9:18.06:425,18,0	1/1:0,21:22:51.18:1204,51,0	1/1:2,15:20:45.15:1063,45,0	1/1:3,39:43:90.31:2079,90,0	1/1:3,26:29:75:1765,75,0	1/1:5,11:19:51.09:948,51,0	1/1:1,14:15:30.10:708,30,0	1/1:1,24:28:57.20:1347,57,0	1/1:1,21:22:60.21:1412,60,0	0/0:23,0:23:57.15:0,57,909	0/0:27,0:27:78.22:0,78,1337	1/1:1,22:25:60.21:1416,60,0	1/1:3,18:22:63.18:1304,63,0	1/1:1,28:32:72.25:1673,72,0	1/1:1,9:10:21.07:496,21,0
chr10	65001468	.	TC	T	14992.78	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=8.262;DP=606;FS=1.431;HRun=1;HaplotypeScore=64.2945;InbreedingCoeff=0.9973;MQ=59.11;MQ0=2;MQRankSum=3.148;QD=38.15;ReadPosRankSum=5.674;VQSLOD=5.1038;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,105,1608	1/1:0,11:11:27.09:377,27,0	0/0:30,0:22:66.22:0,66,1038	0/0:26,0:24:72.21:0,72,1095	0/0:20,0:20:45.07:0,45,869	1/1:0,13:13:39.13:545,39,0	1/1:0,21:21:54.12:755,54,0	0/0:33,0:33:99:0,99,1542	0/0:16,0:16:45.14:0,45,695	1/1:0,17:17:51.15:681,51,0	1/1:0,13:13:36.08:482,36,0	1/1:0,26:26:69.23:965,69,0	0/0:15,0:15:45.13:0,45,692	1/1:1,17:18:51.17:713,51,0	1/1:0,28:28:78.26:1091,78,0	1/1:0,26:26:69.23:965,69,0	1/1:0,25:25:60.20:839,60,0	1/1:0,20:20:57.16:776,57,0	1/1:0,35:35:99:1330,99,0	1/1:0,17:17:48.12:649,48,0	1/1:0,39:39:99:1469,105,0	1/1:0,15:15:45.15:629,45,0	0/0:15,0:15:45.14:0,45,696	0/0:20,1:21:15.19:0,15,793	1/1:0,14:14:42.10:565,42,0	1/1:0,24:24:69.22:945,69,0	1/1:0,20:20:57.19:797,57,0	1/1:0,11:11:30.10:419,30,0
chr10	65001715	.	ACACACACAC	A	4656.28	PASS	AB=1.000;AC=42;AF=0.750;AN=56;BaseQRankSum=10.414;DP=617;FS=11.386;HRun=0;HaplotypeScore=145.7596;InbreedingCoeff=0.6453;MQ=53.34;MQ0=72;MQRankSum=-8.335;QD=10.26;ReadPosRankSum=-0.617;VQSLOD=2.8797;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:59,0:58:99:282,0,464	1/1:4,0:2:6.02:68,6,0	0/0:30,0:14:9.02:0,9,101	0/0:31,0:14:20.56:0,21,281	0/0:20,0:19:30.02:0,30,860	1/1:13,1:14:17.97:270,18,0	1/1:19,1:17:11.97:179,12,0	1/1:17,0:16:20.09:235,20,0	0/1:24,0:24:99:224,0,160	1/1:16,1:11:8.61:156,9,0	1/1:16,1:16:6.49:127,6,0	1/1:23,2:22:9.96:206,10,0	0/0:17,0:17:45.15:0,45,1252	1/1:8,1:8:6.02:117,6,0	1/1:28,2:24:27.45:493,27,0	1/1:13,1:11:14.86:207,15,0	1/1:24,1:19:18.05:256,18,0	1/1:13,1:13:11.97:172,12,0	1/1:10,7:16:12.04:300,12,0	1/1:23,0:22:12.02:132,12,0	1/1:39,0:26:8.81:103,9,0	1/1:22,2:21:3.01:33,3,0	0/0:21,0:21:48.15:0,48,1320	0/0:44,0:44:99:0,111,3826	1/1:16,2:14:5.67:92,6,0	1/1:17,0:11:18.04:213,18,0	1/1:11,9:16:30.01:677,30,0	1/1:7,0:5:9.03:113,9,0
chr10	65001717	.	ACACACAC	A	5392.34	PASS	AB=1.000;AC=42;AF=0.750;AN=56;BaseQRankSum=10.253;DP=618;FS=9.952;HRun=0;HaplotypeScore=127.6066;InbreedingCoeff=0.6521;MQ=51.25;MQ0=77;MQRankSum=-8.575;QD=11.88;ReadPosRankSum=0.254;VQSLOD=3.3030;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:59,0:58:99:187,0,464	1/1:4,0:2:6.02:113,6,0	0/0:28,0:12:9.02:0,9,101	0/0:31,0:14:20.56:0,21,281	0/0:20,0:19:30.02:0,30,724	1/1:3,13:16:18.06:381,18,0	1/1:6,14:17:11.99:266,12,0	1/1:15,0:14:21:247,21,0	0/1:24,0:24:99:154,0,174	1/1:9,8:11:11.58:222,12,0	1/1:3,14:16:6.49:94,6,0	1/1:14,13:22:15:247,15,0	0/0:17,0:17:45.15:0,45,1030	1/1:3,5:7:6.02:122,6,0	1/1:12,17:23:27.07:512,27,0	1/1:4,10:11:15.02:335,15,0	1/1:8,18:19:18.06:413,18,0	1/1:5,10:14:9.50:163,9,0	1/1:16,0:15:12.04:203,12,0	1/1:7,15:21:12.03:299,12,0	1/1:41,0:26:8.79:210,9,0	1/1:7,17:21:3.01:75,3,0	0/0:22,0:22:54.17:0,54,1166	0/0:46,0:46:99:0,114,3199	1/1:8,9:13:5.77:102,6,0	1/1:17,0:11:21.03:274,21,0	1/1:18,2:16:30.05:586,30,0	1/1:2,4:4:9.03:188,9,0
chr10	65001723	.	AC	A	2306.84	PASS	AB=1.000;AC=41;AF=0.732;AN=56;BaseQRankSum=9.360;DP=599;FS=14.548;HRun=2;HaplotypeScore=99.9886;InbreedingCoeff=0.7247;MQ=47.35;MQ0=86;MQRankSum=-8.111;QD=5.53;ReadPosRankSum=-0.357;VQSLOD=-0.6824;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:60,0:60:10:10,0,487	1/1:1,5:4:6.02:76,6,0	0/0:21,0:5:9.02:0,9,101	0/0:29,0:12:20.61:0,21,280	0/0:20,0:19:33.02:0,33,424	1/1:17,0:16:17.71:172,18,0	1/1:18,0:15:11.92:117,12,0	1/1:3,8:8:21.07:266,21,0	0/0:25,0:25:22.53:0,23,242	1/1:15,2:10:11.43:95,11,0	1/1:16,0:15:5.81:51,6,0	1/1:19,4:18:14.60:121,15,0	0/0:19,0:19:51.16:0,51,681	1/1:8,0:6:6.01:64,6,0	1/1:24,4:22:25.88:196,26,0	1/1:13,1:11:14.54:119,15,0	1/1:24,5:20:17.48:137,17,0	1/1:13,2:14:9.12:66,9,0	1/1:9,0:8:11.48:79,11,0	1/1:17,2:18:11.12:58,11,0	1/1:34,7:26:8.77:91,9,0	1/1:22,1:20:2.84:15,3,0	0/0:23,0:23:59.54:0,60,748	0/0:44,0:45:99:0,109,1462	1/1:16,3:13:5.77:75,6,0	1/1:6,16:16:2.20:432,2,0	1/1:13,3:13:28.98:195,29,0	1/1:5,1:4:8.69:67,9,0
chr10	65001724	.	CCACACACACA	C	2006.59	PASS	AB=1.000;AC=29;AF=0.558;AN=52;BaseQRankSum=7.985;DP=623;FS=0.653;HRun=0;HaplotypeScore=149.0212;InbreedingCoeff=0.0163;MQ=46.98;MQ0=87;MQRankSum=-6.823;QD=5.09;ReadPosRankSum=2.115;VQSLOD=2.7166;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:22,37:61:25.64:670,26,0	1/1:5,0:4:3.74:15,4,0	./.	./.	0/0:18,0:21:30.08:0,30,907	0/1:16,0:17:8.70:93,0,9	1/1:15,0:15:1.55:30,2,0	0/1:10,0:7:4.54:6,0,5	1/1:9,17:26:17.98:471,18,0	0/1:15,0:12:28.05:28,0,100	1/1:17,0:17:3.48:41,3,0	0/1:21,0:20:39.99:40,0,66	0/0:20,0:20:39.13:0,39,1463	1/1:8,0:7:2.54:34,3,0	1/1:24,0:22:4.67:167,5,0	0/1:12,0:11:1.05:26,0,1	0/1:26,0:20:14.14:25,0,14	0/1:13,0:13:5.90:50,0,6	0/1:10,0:9:91.36:101,0,91	0/0:20,0:21:0.13:0,0,33	0/0:13,0:31:4.80:0,5,45	1/1:22,0:19:0.47:1,0,0	0/0:22,0:23:48.10:0,48,1575	0/0:43,0:45:99:0,99,3778	0/1:16,0:14:8.86:22,0,9	0/1:19,0:16:64.40:64,0,81	0/1:16,0:13:28.51:272,0,29	1/1:6,0:5:0.61:2,1,0
chr10	65002282	.	T	TCAA	37500.07	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-9.163;DP=739;FS=2.408;HRun=0;HaplotypeScore=103.5885;InbreedingCoeff=0.9787;MQ=88.06;MQ0=0;MQRankSum=-10.111;QD=64.32;ReadPosRankSum=3.746;VQSLOD=6.5034;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,55:58:99:3728,156,0	1/1:0,2:5:6.02:148,6,0	0/0:34,0:34:93.31:0,93,1677	0/0:28,0:28:68.55:0,69,1390	0/0:24,0:24:72.23:0,72,1310	1/1:1,23:25:69.19:1642,69,0	1/1:1,23:25:66.22:1624,66,0	1/1:6,31:41:99:2513,111,0	1/1:2,27:29:78.22:1867,78,0	1/1:2,20:24:72.21:1644,72,0	1/1:2,14:15:42.14:1027,42,0	1/1:2,22:24:66.18:1572,66,0	0/0:22,0:22:66.23:0,66,1229	1/1:1,19:20:57.15:1350,57,0	1/1:0,31:33:90.31:2210,90,0	1/1:2,31:34:96.28:2309,96,0	1/1:3,32:36:81.28:1995,81,0	1/1:0,11:11:30.10:739,30,0	1/1:2,14:16:45.15:1084,45,0	1/1:2,21:22:60.12:1367,60,0	1/1:1,31:33:87.17:1956,87,0	1/1:1,24:25:75.17:1726,75,0	0/0:17,0:17:48.16:0,48,886	0/0:31,0:31:93.32:0,93,1731	1/1:0,21:22:57.20:1400,57,0	1/1:1,23:24:69.24:1677,69,0	1/1:1,45:47:99:3259,135,0	1/1:2,7:9:27.09:662,27,0
chr10	65002615	.	A	AC	16645.48	PASS	AB=0.524;AC=39;AF=0.696;AN=56;BaseQRankSum=-15.385;DP=652;FS=2.115;HRun=1;HaplotypeScore=61.7888;InbreedingCoeff=0.9197;MQ=90.50;MQ0=0;MQRankSum=-5.077;QD=39.82;ReadPosRankSum=2.648;VQSLOD=5.6035;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:57:99:0,169,2124	1/1:0,4:4:8.66:134,9,0	0/0:31,0:31:92.01:0,92,1126	0/0:27,0:27:77.51:0,78,893	0/0:29,0:29:84.26:0,84,1074	1/1:0,20:20:57.19:854,57,0	1/1:1,29:30:75.25:1123,75,0	1/1:0,22:22:66.19:944,66,0	0/0:12,0:12:33.11:0,33,428	1/1:0,32:32:93.30:1370,93,0	1/1:1,21:22:51.17:764,51,0	1/1:1,21:22:51.17:764,51,0	0/0:17,0:17:48.14:0,48,608	1/1:0,18:18:48.16:718,48,0	1/1:1,22:23:57.19:854,57,0	0/1:1,10:11:5.75:416,0,6	1/1:2,18:20:54.10:780,54,0	1/1:0,9:9:21.07:314,21,0	1/1:0,22:22:66.21:964,66,0	1/1:1,23:24:69.17:1000,69,0	1/1:0,26:26:75.25:1123,75,0	1/1:0,28:28:81.17:1177,81,0	0/0:17,0:17:51.15:0,51,647	0/0:44,0:44:99:0,129,1611	1/1:0,32:32:78.26:1168,78,0	1/1:0,28:28:81.26:1192,81,0	1/1:0,20:20:51.17:763,51,0	1/1:0,5:5:15.05:225,15,0
chr10	65003010	.	A	AAAG	1233.17	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-6.500;DP=761;FS=1.653;HRun=0;HaplotypeScore=114.9436;InbreedingCoeff=0.9444;MQ=71.96;MQ0=0;MQRankSum=-2.031;QD=45.67;ReadPosRankSum=-4.601;VQSLOD=3.9301;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,123,1973	0/0:9,0:9:27.08:0,27,417	0/0:17,0:17:48.12:0,48,717	0/0:17,0:17:44.35:0,44,670	0/0:32,0:32:87.28:0,87,1392	0/0:22,0:22:57.13:0,57,876	0/0:23,0:23:66.23:0,66,1078	1/1:3,23:27:72.05:1328,72,0	0/0:35,0:35:90.78:0,91,1465	0/0:25,0:25:60.20:0,60,980	0/0:34,0:34:84.28:0,84,1348	0/0:21,0:21:60.19:0,60,956	0/0:26,0:26:78.25:0,78,1250	0/0:22,0:22:60.18:0,60,930	0/0:33,0:33:99:0,99,1565	0/0:31,0:31:72.23:0,72,1152	0/0:37,0:37:96.30:0,96,1541	0/0:19,0:19:48.16:0,48,784	0/0:30,0:30:84.24:0,84,1319	0/0:23,0:23:69.22:0,69,1078	0/0:43,0:43:99:0,126,2052	0/0:36,0:36:87.28:0,87,1396	0/0:29,0:29:87.29:0,87,1391	0/0:49,0:49:99:0,144,2307	0/0:22,0:22:51.16:0,51,809	0/0:20,0:20:51.16:0,51,810	0/0:30,0:30:90.28:0,90,1421	0/0:5,0:5:9.03:0,9,147
chr10	65003314	.	G	GAAAGAAAGAAAGAAAAGAA	26800.74	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=13.546;DP=605;FS=29.983;HRun=0;HaplotypeScore=291.8101;InbreedingCoeff=0.9046;MQ=56.24;MQ0=1;MQRankSum=-12.059;QD=63.51;ReadPosRankSum=-1.254;VQSLOD=3.1765;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,102,3839	1/1:4,0:6:15.04:577,15,0	0/0:23,0:14:21.28:0,21,808	0/0:18,0:15:35.95:0,36,958	0/0:34,0:34:99:0,99,4061	1/1:0,13:28:6.02:488,6,0	1/1:4,0:9:26.45:1108,26,0	1/1:14,0:27:46.59:809,47,0	0/0:18,0:18:51.17:0,51,2079	1/1:1,10:29:72.63:2974,73,0	1/1:1,11:29:9.03:115,9,0	1/1:9,0:15:44.38:1738,44,0	0/0:11,0:11:30.10:0,30,1212	1/1:8,0:12:26.30:1116,26,0	1/1:11,0:16:45.15:2028,45,0	1/1:14,0:16:39.13:1776,39,0	1/1:2,3:19:9.03:556,9,0	1/1:11,0:17:47.33:2626,47,0	1/1:4,1:22:61.38:2262,61,0	1/1:22,0:25:68.51:2753,69,0	1/1:6,0:10:22.77:476,23,0	1/1:0,18:38:5.61:254,6,0	0/0:24,0:24:69.24:0,69,2964	0/0:20,0:20:48.16:0,48,2410	1/1:1,14:31:9.03:732,9,0	1/1:13,0:22:60.20:3274,60,0	1/1:2,9:31:3.01:241,3,0	1/1:2,0:9:27.09:898,27,0
chr10	65003319	.	A	AAAG	4917.81	PASS	AB=0.821;AC=20;AF=0.357;AN=56;BaseQRankSum=4.994;DP=503;FS=0.435;HRun=0;HaplotypeScore=118.7734;InbreedingCoeff=-0.4183;MQ=60.61;MQ0=1;MQRankSum=-9.459;QD=16.23;ReadPosRankSum=1.429;VQSLOD=4.7560;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,102,1631	0/1:3,2:5:93.25:122,0,93	0/0:25,0:16:23.48:0,23,445	0/0:18,0:15:36.11:0,36,520	0/0:35,0:35:99:0,102,1651	0/1:10,0:10:17.66:72,0,18	0/1:8,3:10:99:208,0,154	0/1:27,0:26:99:172,0,443	0/0:19,0:19:57.18:0,57,907	0/1:17,0:17:16.56:17,0,388	0/0:14,0:14:12.03:0,12,141	0/1:11,6:16:99:460,0,179	0/0:10,0:10:30.10:0,30,492	0/1:5,5:10:99:248,0,141	0/1:9,9:16:99:534,0,167	0/1:5,12:15:99:648,0,104	1/1:14,0:14:6.02:99,6,0	0/1:13,6:18:99:301,0,301	0/1:16,0:16:19.48:19,0,474	0/1:7,18:24:94.67:1027,0,95	0/1:6,3:9:99:148,0,157	0/1:19,0:19:25.89:37,0,26	0/0:23,0:23:69.24:0,69,1148	0/0:19,0:19:48.16:0,48,819	0/1:17,0:17:29.05:113,0,29	0/1:12,9:21:99:551,0,335	0/1:21,0:20:15.88:33,0,16	0/1:8,2:10:99:108,0,251
chr10	65004064	.	GA	G	180.10	PASS	AC=2;AF=0.038;AN=52;BaseQRankSum=4.380;DP=130;FS=0.000;HRun=1;HaplotypeScore=20.2750;InbreedingCoeff=0.4589;MQ=90.70;MQ0=0;MQRankSum=-3.511;QD=20.01;ReadPosRankSum=2.653;VQSLOD=3.6962;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:33.04:0,33,405	./.	0/0:6,0:5:15:0,15,151	0/0:8,0:7:21.07:0,21,324	0/0:4,0:4:12.03:0,12,166	0/0:6,0:6:18.01:0,18,243	0/0:7,0:7:20.99:0,21,277	1/1:0,9:9:24.07:272,24,0	0/0:2,0:2:6.02:0,6,94	0/0:5,0:5:15.05:0,15,234	0/0:2,0:2:6.01:0,6,71	0/0:4,0:4:12.03:0,12,166	0/0:2,0:2:6.01:0,6,71	0/0:3,0:3:6.02:0,6,94	0/0:6,0:6:18.02:0,18,214	0/0:6,0:6:18.04:0,18,254	0/0:8,0:8:21.07:0,21,323	0/0:2,0:2:5.98:0,6,67	0/0:8,0:7:18.04:0,18,241	0/0:3,0:3:9.02:0,9,118	0/0:4,0:4:12.01:0,12,144	0/0:4,0:4:12.04:0,12,186	0/0:3,0:3:9.03:0,9,139	0/0:2,0:2:6.02:0,6,94	0/0:3,0:3:9.03:0,9,139	0/0:4,0:4:12.03:0,12,169	0/0:7,0:7:21.03:0,21,262	./.
chr10	65004749	.	AG	A	11593.87	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=16.511;DP=601;FS=12.550;HRun=5;HaplotypeScore=266.9659;InbreedingCoeff=0.9949;MQ=84.40;MQ0=0;MQRankSum=-17.671;QD=29.50;ReadPosRankSum=4.670;VQSLOD=0.4994;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:90.26:0,90,1183	1/1:0,11:11:33.09:374,33,0	0/0:19,0:19:48.12:0,48,616	0/0:32,0:32:65.65:0,66,942	0/0:21,0:21:54.18:0,54,737	1/1:2,31:33:90.25:1012,90,0	1/1:1,24:25:66.18:739,66,0	0/0:26,0:26:72.22:0,72,956	0/0:20,0:20:57.19:0,57,779	1/1:2,23:25:69.19:780,69,0	1/1:0,19:19:54.05:583,54,0	1/1:0,18:18:54.15:612,54,0	0/0:17,0:17:42.13:0,42,558	1/1:2,29:31:84.24:951,84,0	1/1:0,26:26:78.22:883,78,0	1/1:2,25:27:72.21:816,72,0	1/1:3,14:17:39.11:442,39,0	1/1:0,11:11:33.09:368,33,0	1/1:3,6:9:15.04:170,15,0	1/1:2,26:28:69.20:781,69,0	1/1:3,24:27:33.38:343,33,0	1/1:2,16:18:42.12:476,42,0	0/0:23,0:23:60.15:0,60,769	0/0:19,0:19:54.18:0,54,738	1/1:0,12:12:36.10:408,36,0	1/1:1,23:24:69.20:782,69,0	1/1:1,26:27:81.22:907,81,0	1/1:0,5:5:15.04:170,15,0
chr10	65004760	.	CAGCCTCTTTGGACTAAT	C	40694.66	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=18.084;DP=566;FS=0.000;HRun=0;HaplotypeScore=348.6445;InbreedingCoeff=0.9892;MQ=82.66;MQ0=0;MQRankSum=-18.465;QD=117.61;ReadPosRankSum=8.259;VQSLOD=3.1717;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,105,8135	1/1:1,10:11:30.10:1507,30,0	0/0:21,0:21:63.21:0,63,4049	0/0:28,0:28:78.05:0,78,4541	0/0:26,0:26:75.26:0,75,5926	1/1:4,26:30:81.28:3988,81,0	1/1:6,16:22:51.18:2480,51,0	0/0:26,0:26:69.77:0,70,4630	0/0:21,0:21:60.21:0,60,4885	1/1:8,13:21:42.14:2105,42,0	1/1:4,14:18:45.15:2050,45,0	1/1:1,15:16:45.15:2260,45,0	0/0:20,0:20:54.17:0,54,4117	1/1:9,18:27:60.21:2916,60,0	1/1:3,22:25:66.23:3315,66,0	1/1:6,18:24:63.20:2889,63,0	1/1:2,10:12:30.06:1376,30,0	1/1:3,8:11:24.04:1070,24,0	1/1:2,4:6:12.04:603,12,0	1/1:3,18:21:60.21:2941,60,0	1/1:15,7:22:20.99:855,21,0	1/1:6,10:16:33.11:1656,33,0	0/0:24,0:24:72.25:0,72,5483	0/0:19,0:19:57.15:0,57,4347	1/1:2,10:12:36.12:1664,36,0	1/1:3,18:21:57.20:2769,57,0	1/1:3,22:25:75.26:3647,75,0	1/1:1,4:5:12.04:603,12,0
chr10	65005102	.	TA	T	9253.41	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=6.335;DP=586;FS=4.994;HRun=10;HaplotypeScore=100.0331;InbreedingCoeff=0.9772;MQ=65.67;MQ0=0;MQRankSum=-1.036;QD=20.79;ReadPosRankSum=4.284;VQSLOD=5.1418;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,39:42:83.80:956,84,0	1/1:2,8:10:20.96:176,21,0	0/0:12,0:11:21.05:0,21,225	0/0:9,0:7:12.03:0,12,130	0/0:19,0:19:39.10:0,39,428	1/1:2,8:10:23.99:208,24,0	1/1:3,19:22:50.98:443,51,0	0/0:30,0:29:54.63:0,55,268	1/1:5,18:23:47.98:417,48,0	1/1:7,30:37:86.96:754,87,0	1/1:5,15:20:35.98:312,36,0	1/1:1,17:18:50.99:443,51,0	0/0:24,2:26:23.12:0,23,711	1/1:1,13:14:35.99:312,36,0	1/1:2,17:19:53.97:465,54,0	1/1:2,13:15:41.49:348,41,0	1/1:4,24:28:71.98:625,72,0	1/1:2,9:11:20.99:182,21,0	1/1:6,16:21:50.97:439,51,0	1/1:5,22:27:68.79:591,69,0	1/1:5,20:25:56.98:494,57,0	1/1:3,14:17:41.98:361,42,0	0/0:21,0:22:54.45:0,54,579	0/0:20,3:23:8.01:0,8,524	1/1:6,18:24:53.95:469,54,0	1/1:6,10:16:32.36:269,32,0	1/1:1,35:36:92.98:807,93,0	1/1:2,7:9:20.99:182,21,0
chr10	65005112	.	ACT	A	903.63	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-3.601;DP=553;FS=2.782;HRun=0;HaplotypeScore=131.6568;InbreedingCoeff=0.9877;MQ=67.79;MQ0=0;MQRankSum=-1.880;QD=37.65;ReadPosRankSum=-4.052;VQSLOD=3.8328;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,135,1697	0/0:9,0:9:21.51:0,22,230	0/0:11,0:11:33.11:0,33,571	0/0:7,0:8:21.04:0,21,328	0/0:19,0:19:57.20:0,57,985	0/0:9,0:9:27.08:0,27,323	0/0:21,0:21:57.17:0,57,692	1/1:2,22:24:52.98:999,53,0	0/0:20,0:20:54.17:0,54,676	0/0:33,0:33:93.14:0,93,1161	0/0:16,0:16:38.98:0,39,435	0/0:19,0:19:56.90:0,57,646	0/0:25,0:25:75.19:0,75,1252	0/0:13,0:13:36.11:0,36,419	0/0:18,0:18:54.16:0,54,639	0/0:14,0:14:42.04:0,42,477	0/0:29,0:29:87.25:0,87,1045	0/0:11,0:11:24.06:0,24,268	0/0:20,0:20:60.19:0,60,788	0/0:25,0:25:72.16:0,72,800	0/0:24,0:24:66.20:0,66,798	0/0:15,0:15:42.09:0,42,466	0/0:21,0:21:60.20:0,60,1045	0/0:23,0:23:42.87:0,43,1057	0/0:20,0:20:57.11:0,57,652	0/0:12,0:12:36.07:0,36,452	0/0:39,0:38:99:0,105,1130	0/0:9,0:9:27.06:0,27,297
chr10	65005264	.	C	CA	1681	PASS	AB=0.674;AC=31;AF=0.554;AN=56;BaseQRankSum=-3.442;DP=492;FS=0.588;HRun=15;HaplotypeScore=71.8792;InbreedingCoeff=0.1492;MQ=59.50;MQ0=4;MQRankSum=-1.688;QD=4.68;ReadPosRankSum=-4.937;VQSLOD=0.4344;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:27:26.15:0,26,76	0/1:1,2:3:12.02:19,0,12	0/0:13,0:10:10.92:0,11,69	0/0:14,0:14:9.93:0,10,48	0/0:24,0:29:31.88:0,32,178	1/1:6,11:17:8.98:74,9,0	1/1:7,10:17:2.95:130,3,0	1/1:22,0:21:21.31:108,21,0	0/0:5,0:17:10.13:0,10,29	0/1:10,11:22:32.01:177,0,32	1/1:16,5:20:25.15:169,25,0	1/1:13,2:17:14.25:146,14,0	0/0:16,0:16:5.28:0,5,35	0/1:10,0:10:3.23:62,0,3	1/1:5,8:13:8.99:76,9,0	0/1:4,10:14:7.87:39,0,8	0/1:5,16:21:9.05:149,0,9	1/1:6,7:14:0.05:21,0,0	0/1:6,10:15:33.83:93,0,34	1/1:17,3:21:1.86:124,2,0	1/1:9,7:16:16.07:118,16,0	1/1:12,5:17:12.75:83,13,0	0/1:15,2:21:17.90:18,0,106	0/0:14,0:14:14.35:0,14,89	0/1:7,15:22:2.56:86,0,3	0/1:9,9:19:12.10:116,0,12	0/1:10,15:25:29.70:30,0,39	0/1:1,6:9:4.66:18,0,5
chr10	65005335	.	G	GTTAAT	450.55	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-1.973;DP=572;FS=0.000;HRun=0;HaplotypeScore=109.2724;InbreedingCoeff=0.9885;MQ=81.63;MQ0=0;MQRankSum=-4.343;QD=40.96;ReadPosRankSum=-3.380;VQSLOD=2.8345;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:72.23:0,72,1434	0/0:7,0:7:21.07:0,21,435	0/0:18,0:18:45.15:0,45,908	0/0:15,0:15:41.98:0,42,775	0/0:34,0:34:96.33:0,96,1972	0/0:27,0:27:69.24:0,69,1430	0/0:16,0:16:48.15:0,48,940	1/1:2,6:10:27.01:545,27,0	0/0:23,0:23:60.21:0,60,1244	0/0:28,0:28:84.29:0,84,1703	0/0:22,0:21:60.16:0,60,1197	0/0:18,0:18:54.18:0,54,1091	0/0:14,0:14:42.14:0,42,866	0/0:19,0:19:54.19:0,54,1116	0/0:22,0:22:57.13:0,57,1096	0/0:12,0:12:24.08:0,24,498	0/0:20,0:20:54.17:0,54,1081	0/0:15,0:15:38.99:0,39,761	0/0:29,0:29:81.23:0,81,1611	0/0:25,0:25:72.25:0,72,1475	0/0:15,0:15:33.11:0,33,657	0/0:25,0:25:63.22:0,63,1306	0/0:30,0:30:90.24:0,90,1744	0/0:13,0:13:36.12:0,36,703	0/0:25,0:25:60.21:0,60,1222	0/0:25,0:25:72.25:0,72,1492	0/0:29,0:29:75.24:0,75,1501	0/0:8,0:8:21.07:0,21,435
chr10	65005537	.	TAC	T	1698.05	PASS	AB=0.939;AC=11;AF=0.196;AN=56;BaseQRankSum=-0.316;DP=701;FS=0.529;HRun=0;HaplotypeScore=176.0716;InbreedingCoeff=0.3143;MQ=54.55;MQ0=12;MQRankSum=3.723;QD=6.85;ReadPosRankSum=2.207;VQSLOD=2.9276;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:18,34:56:98.40:1018,98,0	0/0:3,0:2:4.23:0,4,26	0/0:37,0:16:5.97:0,6,65	0/0:38,0:26:7.68:0,8,122	0/1:24,4:28:3.27:3,0,727	0/0:23,0:25:15.51:0,16,105	0/0:33,0:33:11.55:0,12,72	0/0:7,0:5:5.93:0,6,40	1/1:11,20:30:60.23:719,60,0	0/0:38,0:37:29.61:0,30,350	0/0:13,0:11:2.97:0,3,24	0/0:17,0:17:11.03:0,11,56	0/1:17,2:19:26.87:27,0,459	0/1:21,0:21:0:0,0,0	0/0:24,0:26:8.25:0,8,79	1/1:19,1:19:3.44:36,3,0	0/0:23,0:24:8.66:0,9,56	0/0:14,0:15:20.44:0,20,166	0/0:18,0:15:15.39:0,15,178	0/0:17,0:17:12.46:0,12,115	0/0:27,0:25:5.99:0,6,49	0/0:25,0:26:11.08:0,11,98	0/1:18,1:19:7.92:8,0,286	0/1:52,2:54:30.56:31,0,1098	0/0:20,0:17:2.74:0,3,12	0/0:35,0:35:37.67:0,38,426	0/0:26,0:26:17.83:0,18,137	0/0:6,0:6:2.99:0,3,24
chr10	65005571	.	CAG	C	261.82	PASS	AB=0.948;AC=11;AF=0.196;AN=56;BaseQRankSum=7.562;DP=698;FS=50.060;HRun=0;HaplotypeScore=220.5709;InbreedingCoeff=-0.1383;MQ=43.16;MQ0=8;MQRankSum=-1.997;QD=1.39;ReadPosRankSum=-3.200;VQSLOD=0.8485;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:73,0:73:99:0,169,3162	1/1:4,0:3:3.44:21,3,0	0/0:23,0:6:18.06:0,18,319	0/0:38,0:16:37.92:0,38,778	0/0:37,0:37:93.27:0,93,1715	0/1:21,0:20:60.74:61,0,111	0/0:36,1:34:3.32:0,3,550	0/0:16,0:13:21.07:0,21,387	0/0:32,0:31:85.44:0,85,1360	0/1:33,3:34:99:129,0,877	0/1:14,3:13:36.23:36,0,101	0/1:11,1:12:23.39:23,0,155	0/0:20,0:20:57.20:0,57,1053	0/1:16,0:16:17.69:18,0,50	0/0:26,1:27:5.79:0,6,236	0/0:18,0:17:2.32:0,2,274	0/0:22,0:22:4.46:0,4,365	0/1:14,0:13:5.69:6,0,233	0/0:29,0:22:6.24:0,6,781	0/0:7,0:6:2.69:0,3,58	0/0:34,0:31:17.75:0,18,347	0/1:17,1:18:51.80:52,0,55	0/0:16,0:16:42.13:0,42,759	0/0:56,0:56:99:0,126,2332	0/0:18,2:18:12:0,12,231	0/1:31,2:33:48.22:48,0,1086	0/1:17,1:18:7.22:7,0,335	0/0:3,0:3:6.02:0,6,115
chr10	65005585	.	CAGAAACACACACACAT	C	349.63	PASS	AB=0.962;AC=9;AF=0.161;AN=56;BaseQRankSum=6.715;DP=650;FS=10.167;HRun=0;HaplotypeScore=312.3704;InbreedingCoeff=0.0006;MQ=45.95;MQ0=12;MQRankSum=-5.196;QD=2.89;ReadPosRankSum=-3.362;VQSLOD=0.7982;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:75,0:75:99:0,185,9446	0/0:2,0:1:3.01:0,3,38	0/0:43,0:10:15.71:0,16,917	0/0:50,0:17:43.82:0,44,1670	0/0:36,0:36:92.20:0,92,4566	0/1:14,0:13:5.92:6,0,147	0/0:31,0:28:3.92:0,4,1175	1/1:8,0:7:8.95:72,9,0	0/0:30,0:31:75.54:0,76,3554	0/1:29,0:29:11.93:12,0,1583	0/0:13,0:9:12.98:0,13,172	0/1:11,0:11:9.17:9,0,370	0/0:17,0:17:49.72:0,50,2554	0/0:15,0:15:14.67:0,15,100	0/0:21,0:21:0.62:0,1,396	0/0:14,0:14:10.42:0,10,419	0/1:20,5:25:83.89:84,0,566	0/1:16,2:17:99:276,0,110	0/0:16,0:13:33.11:0,33,916	0/0:3,0:3:6.64:0,7,156	0/0:33,3:34:31.58:0,32,744	0/0:11,0:11:12.68:0,13,108	0/0:22,0:22:58.72:0,59,2527	0/0:54,0:54:99:0,122,6270	0/0:15,0:15:19.49:0,19,360	0/0:24,0:24:14.86:0,15,1487	0/1:13,0:13:14.21:14,0,490	0/1:3,0:3:10.96:11,0,112
chr10	65005599	.	CAT	C	102.89	PASS	AB=0.963;AC=7;AF=0.125;AN=56;BaseQRankSum=8.432;DP=650;FS=6.483;HRun=0;HaplotypeScore=210.9044;InbreedingCoeff=-0.0531;MQ=46.11;MQ0=19;MQRankSum=-5.798;QD=1.29;ReadPosRankSum=-3.617;VQSLOD=1.3428;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:73,0:73:99:0,173,3066	0/0:3,0:2:3.01:0,3,38	0/0:50,0:10:26.60:0,27,403	0/0:53,0:22:39.65:0,40,806	0/0:37,0:37:84.22:0,84,1464	0/0:12,0:11:2.88:0,3,38	0/0:24,1:22:21.04:0,21,533	1/1:1,0:1:1.82:5,2,0	0/0:28,0:28:70.44:0,70,1197	0/0:27,0:27:8.98:0,9,852	0/0:10,0:8:6.02:0,6,87	0/0:12,0:12:3:0,3,160	0/0:23,0:23:51.04:0,51,1000	0/0:13,0:13:2.97:0,3,53	0/0:22,0:22:5.61:0,6,191	0/0:17,0:17:9.02:0,9,123	0/1:21,0:22:56.36:56,0,226	0/1:14,2:17:35.40:80,0,35	0/0:21,0:13:28.33:0,28,468	0/0:2,0:2:3.01:0,3,58	0/0:34,3:38:18.05:0,18,322	0/0:10,0:8:3.01:0,3,31	0/0:24,0:24:57.14:0,57,993	0/0:54,0:54:99:0,129,2211	0/0:13,0:13:9.03:0,9,171	0/1:20,2:22:53.66:54,0,760	0/1:14,0:14:6.80:7,0,302	0/1:3,0:3:13.97:14,0,48
chr10	65005613	.	CAG	C	475.85	PASS	AB=0.978;AC=18;AF=0.321;AN=56;BaseQRankSum=10.183;DP=673;FS=19.883;HRun=0;HaplotypeScore=225.9991;InbreedingCoeff=-0.0187;MQ=45.30;MQ0=24;MQRankSum=-7.331;QD=1.67;ReadPosRankSum=1.056;VQSLOD=1.2467;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:71,0:71:99:0,161,2896	0/0:3,0:2:2.94:0,3,18	0/0:40,0:8:14.50:0,15,338	0/0:53,0:15:22.44:0,22,383	0/0:37,0:37:85.75:0,86,1422	0/0:17,0:16:0.42:0,0,1	0/1:23,0:21:16.47:16,0,40	1/1:4,0:4:0.47:1,0,0	0/0:35,0:35:87.24:0,87,1561	0/1:32,0:32:66.44:66,0,357	1/1:11,0:7:6:54,6,0	0/1:14,0:14:9.01:22,0,9	0/0:23,0:23:66.12:0,66,1188	0/0:10,0:10:8.74:0,9,70	0/1:22,0:22:5.62:38,0,6	0/0:14,0:14:7.68:0,8,61	0/1:20,1:21:10.28:82,0,10	0/1:18,0:17:36.59:37,0,37	1/1:21,0:11:15.72:82,16,0	0/0:6,0:6:0.43:0,0,1	0/1:43,0:41:3.23:3,0,33	0/1:16,1:15:18.25:40,0,18	0/0:26,0:26:60.15:0,60,1115	0/0:53,0:53:99:0,129,2293	0/1:13,1:13:9.60:24,0,10	0/1:25,0:25:99:114,0,180	0/1:16,2:18:37.07:37,0,186	0/1:2,0:2:13.91:14,0,27
chr10	65005615	.	GAC	G	987.26	PASS	AB=0.846;AC=19;AF=0.339;AN=56;BaseQRankSum=5.048;DP=684;FS=15.048;HRun=0;HaplotypeScore=223.7391;InbreedingCoeff=-0.1065;MQ=45.24;MQ0=27;MQRankSum=-4.439;QD=3.29;ReadPosRankSum=1.480;VQSLOD=1.1727;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:69,0:69:99:0,162,2664	1/1:2,0:2:1.25:3,1,0	0/0:40,0:7:17.57:0,18,290	0/0:53,0:13:20.94:0,21,310	0/0:35,0:35:84.23:0,84,1367	0/0:13,5:17:5.98:0,6,50	0/1:23,4:25:87.31:87,0,130	0/0:4,0:4:0.89:0,1,2	0/0:35,0:35:93.21:0,93,1503	0/1:25,6:31:99:202,0,464	1/1:8,2:6:5.85:44,6,0	0/1:11,3:15:37.34:45,0,37	0/0:24,0:24:69.21:0,69,1145	0/1:10,0:10:0.33:0,0,72	0/1:13,8:21:60.85:61,0,72	0/1:14,1:15:4.60:5,0,77	0/1:20,1:21:16.97:17,0,72	0/0:18,0:17:26.66:0,27,198	0/1:19,4:12:59.64:119,0,60	0/0:6,0:6:11.93:0,12,92	0/1:42,1:42:42.88:46,0,43	0/1:17,3:18:12.70:13,0,67	0/0:25,0:25:60.21:0,60,1032	0/0:57,0:57:99:0,141,2286	1/1:14,0:13:5.85:75,6,0	0/1:17,8:25:99:299,0,294	0/1:13,5:18:93.13:93,0,248	0/1:1,1:2:33.82:34,0,36
chr10	65005619	.	CACACAGAT	C	1692.20	PASS	AB=0.993;AC=21;AF=0.375;AN=56;BaseQRankSum=5.584;DP=716;FS=7.840;HRun=0;HaplotypeScore=281.2664;InbreedingCoeff=-0.1272;MQ=45.78;MQ0=26;MQRankSum=-6.903;QD=5.05;ReadPosRankSum=-0.078;VQSLOD=1.2708;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:68,0:69:99:0,161,5983	1/1:3,0:3:1.25:3,1,0	0/0:37,0:8:14.79:0,15,458	0/0:47,0:10:21.02:0,21,471	0/0:36,0:36:90.28:0,90,3360	0/0:19,0:18:5.54:0,6,47	0/1:29,1:29:99:199,0,217	1/1:4,0:4:2.68:11,3,0	0/0:38,0:38:86.77:0,87,3510	0/1:31,0:31:99:331,0,391	1/1:9,0:5:6.02:92,6,0	0/1:18,0:18:68.94:69,0,80	0/0:24,0:24:69.21:0,69,2414	0/1:9,0:9:30.45:30,0,55	0/1:22,0:22:67.39:86,0,67	0/1:15,0:15:27.41:27,0,69	0/1:26,1:25:99:101,0,122	0/0:20,0:19:12.76:0,13,237	0/1:29,0:14:94.31:173,0,94	0/0:5,1:6:11.94:0,12,98	0/1:50,0:48:58.83:59,0,83	0/1:24,0:22:31.16:31,0,103	0/0:27,0:27:63.22:0,63,2331	0/0:58,0:58:99:0,144,5151	0/1:15,0:14:15.94:113,0,16	0/1:26,0:26:99:391,0,193	0/1:20,0:20:99:99,0,220	1/1:1,1:2:5.75:41,6,0
chr10	65005621	.	CACAG	C	1737.92	PASS	AB=0.965;AC=24;AF=0.429;AN=56;BaseQRankSum=9.323;DP=722;FS=19.519;HRun=0;HaplotypeScore=247.5045;InbreedingCoeff=0.1499;MQ=45.97;MQ0=26;MQRankSum=-4.149;QD=4.67;ReadPosRankSum=-5.834;VQSLOD=-0.0784;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:69,0:69:99:0,149,4237	0/0:2,1:3:0:0,0,0	0/0:36,0:8:20.87:0,21,385	0/0:47,0:11:23.93:0,24,426	0/0:37,0:37:93.27:0,93,2312	0/1:19,1:19:13.98:40,0,14	1/1:29,4:31:15.68:246,16,0	0/0:4,0:4:0.89:0,1,2	0/0:38,0:38:98.84:0,99,2466	0/1:27,1:28:99:278,0,255	1/1:9,2:7:6.02:88,6,0	1/1:17,0:17:5.99:72,6,0	0/0:25,0:25:72.21:0,72,1779	0/1:9,0:9:30.69:31,0,53	1/1:23,0:23:5.53:75,6,0	0/1:15,0:15:30.72:33,0,31	0/1:26,2:26:74.87:75,0,103	0/1:17,2:20:35.64:36,0,183	1/1:27,0:13:12.17:220,12,0	0/0:6,0:6:4.77:0,5,22	1/1:39,6:47:13.15:127,13,0	0/1:22,2:22:19.25:19,0,20	0/0:27,0:27:63.20:0,63,1651	0/0:57,0:57:99:0,144,3706	1/1:15,1:15:5.96:88,6,0	0/1:26,1:27:99:357,0,104	0/1:21,0:21:99:109,0,148	0/1:2,0:2:13.92:22,0,14
chr10	65005643	.	C	CAT	235.90	PASS	AB=0.787;AC=2;AF=0.036;AN=56;BaseQRankSum=4.547;DP=744;FS=15.148;HRun=0;HaplotypeScore=234.6765;InbreedingCoeff=-0.0631;MQ=45.84;MQ0=24;MQRankSum=-4.850;QD=4.81;ReadPosRankSum=-0.594;VQSLOD=1.5291;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:68,1:69:99:0,168,2446	0/0:5,0:5:8.57:0,9,55	0/0:30,0:2:2.45:0,2,45	0/0:48,0:14:26.25:0,26,326	0/0:38,0:38:99:0,102,1470	0/0:21,0:20:20.60:0,21,163	0/0:37,1:36:44.04:0,44,356	0/0:4,0:4:2.96:0,3,19	0/0:42,0:42:99:0,111,1635	0/0:27,0:25:60.53:0,61,479	0/0:7,0:6:2.99:0,3,24	0/0:18,0:18:17.85:0,18,138	0/0:28,0:28:72.24:0,72,1093	0/0:13,0:13:16.20:0,16,120	0/0:24,0:24:24.86:0,25,170	0/0:17,0:17:17.90:0,18,131	0/1:21,6:26:86.99:87,0,112	0/1:14,7:20:99:237,0,137	0/0:25,0:15:35.18:0,35,350	0/0:15,0:15:23.89:0,24,183	0/0:50,9:58:27.76:0,28,166	0/0:28,0:26:26.91:0,27,210	0/0:22,0:22:54.14:0,54,762	0/0:54,1:55:99:0,135,2013	0/0:11,0:10:3:0,3,25	0/0:25,0:25:56.84:0,57,332	0/0:22,0:22:38.71:0,39,215	0/0:4,0:4:6.31:0,6,24
chr10	65005649	.	G	GAC	8036.20	PASS	AB=0.643;AC=36;AF=0.667;AN=54;BaseQRankSum=11.057;DP=752;FS=2.158;HRun=0;HaplotypeScore=200.2049;InbreedingCoeff=0.7591;MQ=46.89;MQ0=27;MQRankSum=-4.955;QD=19.41;ReadPosRankSum=0.126;VQSLOD=5.1250;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:63,0:64:99:0,147,1785	1/1:1,4:5:6.02:100,6,0	0/0:32,0:4:9.03:0,9,114	0/0:48,0:14:24.75:0,25,255	0/0:37,0:37:84.11:0,84,987	1/1:6,13:19:21.02:351,21,0	1/1:3,33:35:48.16:803,48,0	./.	0/0:43,0:43:99:0,99,1259	1/1:8,20:27:16.98:951,17,0	1/1:2,5:6:3.01:50,3,0	1/1:6,11:18:17.85:284,18,0	0/0:28,0:28:75.24:0,75,953	1/1:2,11:13:18.06:301,18,0	1/1:11,12:23:21.03:339,21,0	1/1:5,14:19:21.07:351,21,0	0/1:16,10:26:47.98:351,0,48	1/1:12,9:22:8.61:499,9,0	1/1:13,7:14:4.79:364,5,0	1/1:5,12:17:21.07:351,21,0	1/1:27,31:61:29.70:496,30,0	1/1:4,22:24:27.09:452,27,0	0/0:24,0:24:48.11:0,48,596	0/0:58,0:58:99:0,135,1657	0/1:2,9:10:4.34:45,0,4	1/1:11,16:27:69.02:1082,69,0	1/1:8,15:23:45.14:725,45,0	1/1:2,2:4:9.03:140,9,0
chr10	65005705	.	CACACAG	C	7482.30	PASS	AB=0.718;AC=37;AF=0.661;AN=56;BaseQRankSum=14.024;DP=789;FS=8.917;HRun=0;HaplotypeScore=199.9127;InbreedingCoeff=0.8296;MQ=47.43;MQ0=18;MQRankSum=-7.689;QD=16.74;ReadPosRankSum=-4.801;VQSLOD=2.2393;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:55:99:0,138,3928	1/1:4,3:7:9.46:180,9,0	0/0:45,0:10:17.16:0,17,399	0/0:57,0:19:20:0,20,366	0/0:29,0:29:66.23:0,66,1864	1/1:10,6:16:18.06:297,18,0	1/1:14,17:28:17.90:321,18,0	0/0:5,0:5:3.01:0,3,61	0/0:37,0:37:69.21:0,69,1758	1/1:16,21:33:81.20:1583,81,0	1/1:4,7:12:6.02:114,6,0	1/1:10,19:28:12.47:215,12,0	0/0:32,0:32:87.30:0,87,2538	1/1:8,10:19:15.45:186,15,0	1/1:9,12:21:3.01:48,3,0	1/1:8,13:20:11.97:194,12,0	1/1:15,7:21:13.37:289,13,0	1/1:12,4:16:30.08:505,30,0	1/1:7,9:13:27.09:566,27,0	1/1:7,21:28:18.03:299,18,0	1/1:49,9:54:32.74:498,33,0	0/1:17,11:28:0.60:150,0,1	0/0:23,0:23:60.21:0,60,1725	0/0:57,0:57:99:0,120,3758	1/1:8,16:23:2.95:66,3,0	1/1:19,16:34:60.11:1105,60,0	1/1:9,12:21:39:705,39,0	1/1:5,1:5:12.02:162,12,0
chr10	65005711	.	G	GAC	1737.94	PASS	AB=0.986;AC=23;AF=0.411;AN=56;BaseQRankSum=7.132;DP=799;FS=6.496;HRun=0;HaplotypeScore=189.2882;InbreedingCoeff=0.0340;MQ=46.32;MQ0=19;MQRankSum=0.124;QD=4.07;ReadPosRankSum=-8.854;VQSLOD=-0.7064;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:52:99:0,144,1944	0/1:7,0:7:4.15:53,0,4	0/0:51,0:9:17.38:0,17,262	0/0:62,0:19:31.07:0,31,331	0/0:27,0:27:69.23:0,69,943	0/1:14,1:15:18.70:124,0,19	0/1:31,1:30:8.15:146,0,8	0/0:6,0:6:3.01:0,3,37	0/0:33,0:33:69.18:0,69,940	0/1:39,0:34:99:161,0,160	0/1:14,0:14:3.75:63,0,4	0/1:32,0:31:6.26:21,0,6	0/0:35,0:35:93.24:0,93,1249	1/1:18,1:20:11.09:165,11,0	1/1:19,1:20:2.93:48,3,0	1/1:20,0:19:14.92:213,15,0	1/1:26,0:26:8.80:120,9,0	0/1:17,0:17:37.96:105,0,38	0/1:17,0:13:41.77:66,0,42	1/1:28,0:28:0.01:163,0,0	0/1:56,2:54:1.46:157,0,1	0/1:24,1:25:8.77:43,0,9	0/0:24,0:24:63.19:0,63,841	0/0:57,0:57:99:0,120,1645	0/0:22,0:22:2.45:0,2,21	0/1:30,0:29:99:123,0,112	0/1:20,0:20:30.34:93,0,30	0/1:6,0:5:12.95:41,0,13
chr10	65005713	.	CACAG	C	1841.84	PASS	AB=0.983;AC=24;AF=0.429;AN=56;BaseQRankSum=14.077;DP=809;FS=16.908;HRun=0;HaplotypeScore=204.1696;InbreedingCoeff=-0.0457;MQ=46.36;MQ0=20;MQRankSum=-4.246;QD=4.05;ReadPosRankSum=-0.908;VQSLOD=1.0979;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:52:99:0,124,3477	1/1:7,0:7:9.35:69,9,0	0/0:50,0:9:23.60:0,24,416	0/0:65,0:18:13.50:0,14,491	0/0:28,0:28:75.26:0,75,1870	0/1:15,1:16:38.47:58,0,38	1/1:32,0:30:6.79:83,7,0	0/0:6,0:6:3.01:0,3,64	0/0:34,0:34:75.19:0,75,1629	0/1:38,0:35:44.19:447,0,44	0/1:14,0:14:6.99:26,0,7	0/1:31,0:30:40.19:49,0,40	0/0:36,0:36:99:0,102,2400	0/1:20,1:21:23.67:24,0,42	1/1:19,1:20:2.38:9,2,0	0/1:19,1:19:3.59:39,0,4	0/1:26,1:27:51.39:51,0,87	0/1:16,0:16:10.16:147,0,10	0/1:18,0:14:61.02:189,0,61	0/1:29,0:29:19.28:54,0,19	0/1:60,0:55:70.75:124,0,71	0/1:24,0:24:10.32:10,0,34	0/0:25,0:25:66.23:0,66,1663	0/0:55,0:56:99:0,123,3159	0/1:21,0:21:7.19:24,0,7	0/1:32,1:32:47.04:342,0,47	1/1:19,1:20:10.61:234,11,0	1/1:6,0:5:9.50:36,10,0
chr10	65005741	.	GAC	G	9350.69	PASS	AB=0.763;AC=38;AF=0.704;AN=54;BaseQRankSum=13.431;DP=852;FS=9.179;HRun=0;HaplotypeScore=180.0027;InbreedingCoeff=0.8359;MQ=44.51;MQ0=33;MQRankSum=-4.534;QD=16.18;ReadPosRankSum=-0.579;VQSLOD=4.2802;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:55:99:0,144,2288	1/1:1,5:6:5.92:78,6,0	0/0:37,1:6:15.05:0,15,254	0/1:48,3:10:1.40:1,0,135	0/0:31,0:31:75.26:0,75,1256	1/1:1,16:17:20.95:273,21,0	1/1:11,24:34:45.13:571,45,0	./.	0/0:34,0:34:71.28:0,71,1181	1/1:13,30:41:89.08:1142,89,0	1/1:2,18:19:33.11:429,33,0	1/1:9,25:33:24.48:312,24,0	0/0:31,0:31:78.25:0,78,1299	1/1:4,19:23:23.86:291,24,0	1/1:4,21:24:17.72:222,18,0	0/1:5,13:17:36.02:141,0,36	1/1:12,23:32:56.30:693,56,0	1/1:5,14:17:42.14:545,42,0	1/1:10,12:15:27.09:351,27,0	1/1:4,28:32:39.02:507,39,0	1/1:20,52:66:99:1308,102,0	1/1:7,20:27:36.06:451,36,0	0/0:22,0:22:54.16:0,54,886	0/0:54,0:54:99:0,111,1849	1/1:4,19:23:15.03:194,15,0	1/1:8,37:42:83.47:1258,83,0	1/1:2,11:13:24.08:310,24,0	1/1:2,13:10:21.07:273,21,0
chr10	65005993	.	GAC	G	1114.71	PASS	AB=0.890;AC=21;AF=0.457;AN=46;BaseQRankSum=7.035;DP=648;FS=35.387;HRun=0;HaplotypeScore=117.0910;InbreedingCoeff=0.1250;MQ=41.31;MQ0=70;MQRankSum=-1.194;QD=3.32;ReadPosRankSum=-0.610;VQSLOD=0.3780;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:30:0.20:0,0,275	1/1:4,3:7:5.20:45,5,0	./.	./.	0/0:24,1:23:54.15:0,54,847	0/1:13,4:16:17.93:31,0,18	0/1:28,1:24:15:49,0,15	0/0:34,0:11:15.41:0,15,97	0/0:28,0:26:24.07:0,24,348	1/1:12,4:9:15.03:171,15,0	./.	0/1:13,7:19:0.08:51,0,0	0/0:28,1:28:31.13:0,31,1010	1/1:18,8:24:13.69:162,14,0	0/1:15,2:14:5.20:32,0,5	0/1:15,2:17:39.30:106,0,39	0/1:18,1:16:11.07:30,0,11	0/1:14,3:15:54.11:149,0,54	0/1:24,3:14:57.51:58,0,85	./.	1/1:57,3:52:2.76:37,3,0	./.	0/0:27,0:26:60.15:0,60,955	0/0:81,1:81:99:0,193,3101	1/1:8,4:9:3.01:38,3,0	0/1:35,0:24:43.63:146,0,44	1/1:16,1:17:13.80:166,14,0	0/0:5,0:3:2.99:0,3,23
chr10	65005997	.	CACACACACAGACACACAGACACACAGACACACAG	C	3778.38	PASS	AB=0.959;AC=25;AF=0.500;AN=50;BaseQRankSum=2.348;DP=626;FS=7.432;HRun=0;HaplotypeScore=337.0556;InbreedingCoeff=0.2663;MQ=41.22;MQ0=64;MQRankSum=-4.599;QD=11.05;ReadPosRankSum=-5.341;VQSLOD=0.4390;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:30:2.69:0,3,294	0/1:7,0:7:10.63:104,0,11	./.	./.	0/0:27,0:25:60.21:0,60,3264	0/1:16,0:15:39.02:76,0,39	0/1:28,0:23:36.05:132,0,36	0/0:33,0:10:15.67:0,16,104	0/0:28,0:26:26.27:0,26,372	1/1:14,0:8:20.96:441,21,0	./.	1/1:19,0:18:7.22:179,7,0	0/0:30,0:29:73.87:0,74,3539	1/1:25,0:23:26.12:502,26,0	1/1:18,0:15:5.90:140,6,0	0/1:18,0:18:68.26:289,0,68	1/1:18,0:15:11.94:140,12,0	0/1:17,0:15:93.37:398,0,93	0/1:27,0:13:47.68:220,0,48	0/0:8,7:12:0.47:0,0,1	1/1:59,0:51:13.64:138,14,0	1/1:17,0:10:3:25,3,0	0/0:27,0:26:64.41:0,64,3022	0/0:80,0:79:99:0,214,10838	1/1:12,0:9:3.01:62,3,0	0/1:19,13:22:45.89:504,0,46	1/1:15,0:15:11.31:429,11,0	0/0:4,0:2:3.01:0,3,30
chr10	65006007	.	G	GAC	323.47	PASS	AB=0.972;AC=27;AF=0.614;AN=44;BaseQRankSum=7.221;DP=551;FS=25.432;HRun=0;HaplotypeScore=120.4536;InbreedingCoeff=0.3042;MQ=40.21;MQ0=63;MQRankSum=-2.926;QD=0.99;ReadPosRankSum=-3.675;VQSLOD=-0.6255;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:23:6.55:35,7,0	1/1:8,0:8:0.82:10,1,0	./.	./.	0/0:26,0:24:57.17:0,57,735	0/1:15,1:15:0:0,0,0	0/1:23,0:18:0:0,0,0	1/1:22,0:3:2.37:8,2,0	1/1:26,0:23:12.41:93,12,0	1/1:9,0:4:2.60:10,3,0	./.	0/1:19,0:18:4.53:5,0,5	0/0:28,0:27:69.03:0,69,862	1/1:20,0:19:4.84:28,5,0	1/1:15,2:14:6.22:64,6,0	0/0:18,0:18:2.49:0,2,48	1/1:10,1:8:3.25:17,3,0	0/1:15,1:14:20.16:20,0,31	0/1:21,1:10:3.31:62,0,3	./.	0/1:44,0:36:0.25:0,0,0	./.	0/0:26,0:25:60.14:0,60,794	0/0:75,0:74:99:0,196,2532	./.	0/1:28,1:20:39.53:57,0,40	1/1:14,0:14:0.23:32,0,0	1/1:3,0:1:2.80:13,3,0
chr10	65006009	.	CACACAG	C	502.78	PASS	AB=0.952;AC=26;AF=0.591;AN=44;BaseQRankSum=7.979;DP=549;FS=1.391;HRun=0;HaplotypeScore=140.4405;InbreedingCoeff=0.2830;MQ=39.96;MQ0=62;MQRankSum=-5.027;QD=1.60;ReadPosRankSum=-3.625;VQSLOD=1.7516;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:22:6.05:34,6,0	1/1:8,0:8:4.28:17,4,0	./.	./.	0/0:26,0:24:60.20:0,60,1782	1/1:14,1:14:2.34:19,2,0	0/0:17,6:18:1.27:0,1,3	1/1:21,0:3:2.37:8,2,0	1/1:25,0:22:9.95:77,10,0	1/1:9,0:4:1.37:8,1,0	./.	1/1:20,0:19:7.98:44,8,0	0/0:29,0:28:78.08:0,78,2041	1/1:21,0:19:12.37:56,12,0	0/1:18,0:15:6.88:7,0,8	0/1:16,2:18:7.16:7,0,50	1/1:10,0:8:4.03:20,4,0	0/1:15,1:14:18.61:66,0,19	0/1:23,0:11:30.84:83,0,31	./.	0/1:38,3:35:0:0,0,0	./.	0/0:26,0:25:66.22:0,66,1619	0/0:75,0:74:99:0,195,5700	./.	0/1:27,2:20:40.24:136,0,40	1/1:13,0:13:11.60:61,12,0	0/0:3,0:1:0:0,0,0
chr10	65006013	.	CAG	C	871.63	PASS	AB=0.973;AC=31;AF=0.646;AN=48;BaseQRankSum=9.045;DP=527;FS=2.608;HRun=0;HaplotypeScore=118.4261;InbreedingCoeff=0.2952;MQ=39.78;MQ0=61;MQRankSum=-6.293;QD=2.72;ReadPosRankSum=-4.739;VQSLOD=0.8273;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:20:17.57:126,18,0	1/1:8,0:8:4.42:28,4,0	./.	./.	0/0:28,0:26:65.54:0,66,1150	1/1:13,2:14:2.72:20,3,0	1/1:25,1:21:1.65:14,2,0	1/1:21,0:3:5.31:26,5,0	1/1:24,0:21:18.37:140,18,0	1/1:11,0:7:11.67:73,12,0	./.	1/1:20,0:19:11.63:71,12,0	0/0:27,0:26:78.04:0,78,1280	1/1:18,1:17:12.41:50,12,0	0/1:18,0:15:15.45:32,0,15	0/1:13,1:14:23.48:55,0,23	1/1:12,0:9:2.75:14,3,0	0/1:13,1:12:63.30:107,0,63	0/1:20,0:10:8.59:63,0,9	./.	1/1:31,0:23:0.47:1,0,0	0/0:14,0:7:0:0,0,0	0/0:27,0:26:68.74:0,69,1221	0/0:72,0:71:99:0,198,3551	0/0:11,0:8:0:0,0,0	0/1:29,0:21:35.27:73,0,35	1/1:13,0:13:19.22:122,19,0	1/1:3,0:1:2.04:6,2,0
chr10	65006015	.	GACAC	G	192.40	PASS	AB=0.962;AC=10;AF=0.217;AN=46;BaseQRankSum=6.947;DP=517;FS=9.192;HRun=0;HaplotypeScore=128.9787;InbreedingCoeff=-0.0449;MQ=40.00;MQ0=58;MQRankSum=-6.736;QD=1.39;ReadPosRankSum=-0.487;VQSLOD=1.3744;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:19:11.88:0,12,87	0/0:8,0:8:1.02:0,1,19	./.	./.	0/0:28,0:26:66.21:0,66,1535	0/0:16,0:15:1.54:0,2,5	0/0:25,0:20:0.27:0,0,1	0/0:20,0:2:2.92:0,3,17	0/0:22,0:19:1.72:0,2,17	0/0:12,0:9:14.87:0,15,106	./.	0/1:18,1:18:6.73:7,0,8	0/0:27,0:26:72.23:0,72,1742	0/1:16,0:15:7.05:7,0,22	0/0:16,1:14:6.01:0,6,26	0/1:11,2:13:6.48:30,0,6	0/1:14,0:11:6.98:7,0,25	0/1:12,1:12:43.22:55,0,43	0/1:17,1:9:34.11:55,0,34	./.	0/0:32,1:26:0.43:0,0,1	./.	0/0:27,0:26:69.24:0,69,1587	0/0:71,0:70:99:0,193,4699	0/0:10,0:8:0:0,0,0	0/1:28,0:21:67.80:70,0,68	0/1:13,0:13:22.34:22,0,26	1/1:2,1:1:3.01:57,3,0
chr10	65006021	.	CAG	C	1041.92	PASS	AB=0.952;AC=33;AF=0.688;AN=48;BaseQRankSum=9.679;DP=518;FS=2.767;HRun=0;HaplotypeScore=113.2795;InbreedingCoeff=0.2935;MQ=40.40;MQ0=53;MQRankSum=-6.859;QD=3.27;ReadPosRankSum=-4.019;VQSLOD=1.3291;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:14:5.94:47,6,0	1/1:10,0:10:4.48:44,4,0	./.	./.	0/0:27,0:25:66.21:0,66,1220	1/1:14,3:16:5.74:44,6,0	1/1:20,3:18:1.87:23,2,0	1/1:20,0:3:5.55:29,6,0	1/1:21,0:18:17.42:125,17,0	0/1:12,0:10:25.85:31,0,26	./.	1/1:10,7:16:6.02:66,6,0	0/0:24,0:24:71.70:0,72,1263	1/1:11,5:15:14.59:129,15,0	0/1:16,2:15:22.92:23,0,25	1/1:8,4:12:8.04:147,8,0	0/1:12,1:10:2.56:3,0,18	0/1:14,0:12:16.71:80,0,17	1/1:20,0:10:3.28:61,3,0	./.	1/1:28,2:24:3.13:22,3,0	1/1:14,0:8:5.97:49,6,0	0/0:29,0:28:74.80:0,75,1156	0/0:71,0:70:99:0,189,3421	0/0:15,0:13:0:0,0,0	0/1:24,2:21:35.21:111,0,35	1/1:16,0:16:20.77:145,21,0	1/1:3,0:1:2.94:18,3,0
chr10	65006029	.	CAGACAG	C	2258.66	PASS	AB=0.887;AC=37;AF=0.740;AN=50;BaseQRankSum=11.075;DP=507;FS=17.119;HRun=0;HaplotypeScore=137.7624;InbreedingCoeff=0.4785;MQ=42.81;MQ0=37;MQRankSum=-6.599;QD=6.66;ReadPosRankSum=-4.504;VQSLOD=-0.1121;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:12:8.51:96,9,0	1/1:2,0:7:6.38:60,6,0	./.	0/1:14,0:4:3.01:3,0,39	0/0:27,0:26:72.23:0,72,1880	1/1:17,0:16:5.91:95,6,0	1/1:18,4:21:10.75:115,11,0	1/1:18,0:6:13.84:82,14,0	1/1:16,0:16:11.68:72,12,0	1/1:3,7:9:9.03:101,9,0	./.	1/1:14,1:14:6.02:120,6,0	0/0:27,0:27:81.27:0,81,2136	1/1:14,1:14:14.94:234,15,0	1/1:10,8:15:5.14:43,5,0	1/1:16,1:17:29.53:354,30,0	1/1:12,0:12:13.06:119,13,0	0/1:12,1:12:2.52:209,0,3	0/1:21,0:11:12.04:101,0,12	./.	1/1:34,0:31:4.33:86,4,0	1/1:11,1:8:9.01:104,9,0	0/0:22,0:21:55.42:0,55,1444	0/0:67,0:67:99:0,186,5455	0/1:3,15:17:0:0,0,0	0/1:25,1:22:5.50:210,0,6	1/1:1,12:13:14.89:196,15,0	1/1:1,1:1:2.94:18,3,0
chr10	65006037	.	CAG	C	1652.81	PASS	AB=1.000;AC=36;AF=0.692;AN=52;BaseQRankSum=10.359;DP=519;FS=22.967;HRun=0;HaplotypeScore=120.4440;InbreedingCoeff=0.5062;MQ=44.98;MQ0=29;MQRankSum=-5.180;QD=5.12;ReadPosRankSum=-2.488;VQSLOD=1.2263;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:17:8.54:68,9,0	1/1:7,0:7:1.27:38,1,0	0/0:15,0:2:1.66:0,2,15	0/0:22,0:6:11.31:0,11,123	0/0:28,0:27:63.05:0,63,915	1/1:16,0:15:5.29:42,5,0	1/1:23,0:22:11.67:89,12,0	1/1:13,6:10:4.44:148,4,0	1/1:19,0:17:14.88:112,15,0	0/1:11,0:11:3.52:64,0,4	./.	1/1:15,0:14:9.01:90,9,0	0/0:27,1:28:3.86:0,4,1078	1/1:16,0:16:15.83:148,16,0	0/1:16,0:13:2.92:3,0,16	1/1:19,0:19:25.22:291,25,0	1/1:15,0:13:1.95:92,2,0	0/1:11,0:10:9.30:77,0,9	1/1:18,0:12:19.66:139,20,0	./.	1/1:36,0:32:5.28:49,5,0	1/1:11,0:9:9.44:75,9,0	0/0:18,0:18:34.33:0,34,609	0/0:65,0:65:99:0,125,2302	0/1:18,0:17:0:0,0,0	1/1:20,0:19:20.34:177,20,0	1/1:13,0:13:12.16:95,12,0	1/1:2,0:1:2.92:17,3,0
chr10	65006039	.	GAC	G	201.81	PASS	AB=0.983;AC=15;AF=0.278;AN=54;BaseQRankSum=5.205;DP=529;FS=17.921;HRun=0;HaplotypeScore=122.9985;InbreedingCoeff=-0.2914;MQ=44.93;MQ0=29;MQRankSum=-2.978;QD=0.71;ReadPosRankSum=2.746;VQSLOD=0.6980;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:18:16.67:0,17,125	0/1:7,0:7:13.88:14,0,29	0/0:19,0:2:5.05:0,5,41	0/0:25,1:6:14.85:0,15,148	0/0:26,1:26:10.15:0,10,581	0/1:15,0:14:2.97:3,0,20	0/0:23,0:22:3.21:0,3,46	0/1:19,0:11:38.69:39,0,61	0/1:21,0:19:6.08:6,0,16	0/0:13,0:13:17.35:0,17,161	./.	0/1:16,0:15:15.28:21,0,15	0/1:25,3:28:36.55:37,0,789	0/1:15,0:15:25.86:26,0,54	0/0:16,0:13:5.61:0,6,48	0/1:19,0:19:14.42:74,0,14	0/0:15,0:13:4.03:0,4,65	0/1:12,0:11:4.78:5,0,38	0/0:17,0:13:7.79:0,8,77	0/0:10,0:9:2.94:0,3,18	0/0:40,0:35:4.35:0,4,29	0/0:11,0:9:3:0,3,24	0/1:16,1:17:1.90:2,0,392	0/1:59,5:64:61.20:61,0,1334	1/1:19,0:18:0.28:1,0,0	0/1:20,0:19:27.80:28,0,32	0/1:13,0:13:15.63:17,0,16	0/0:2,0:1:0.47:0,0,1
chr10	65007249	.	A	ATTTT	814.84	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-0.436;DP=482;FS=25.972;HRun=10;HaplotypeScore=81.5571;InbreedingCoeff=0.9695;MQ=77.85;MQ0=0;MQRankSum=-4.391;QD=25.46;ReadPosRankSum=-4.021;VQSLOD=-0.6778;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:28:78.15:0,78,1025	0/0:13,0:13:29.99:0,30,406	0/0:18,0:15:29.94:0,30,387	0/0:21,0:20:24.71:0,25,311	0/0:21,0:21:60.19:0,60,849	0/0:16,0:16:45.10:0,45,582	0/0:10,0:12:31.35:0,31,426	1/1:12,13:32:44.83:910,45,0	0/0:12,0:12:32.45:0,32,447	0/0:21,0:21:60.15:0,60,833	0/0:12,0:12:36.10:0,36,487	0/0:13,0:13:33.06:0,33,449	0/0:13,0:13:13.56:0,14,384	0/0:14,0:14:42.14:0,42,594	0/0:18,0:18:48.11:0,48,679	0/0:7,0:7:21.07:0,21,295	0/0:27,0:27:69.14:0,69,957	0/0:16,0:17:48.12:0,48,656	0/0:20,0:20:54.14:0,54,743	0/0:14,0:15:37.31:0,37,512	0/0:21,0:21:48.06:0,48,661	0/0:16,0:16:33.03:0,33,467	0/0:13,0:13:36.12:0,36,509	0/0:17,0:17:45.13:0,45,635	0/0:17,0:17:45.14:0,45,635	0/0:13,0:13:27.05:0,27,382	0/0:17,0:17:45.10:0,45,616	0/0:18,0:18:46.69:0,47,641
chr10	65007465	.	CGGGGGGGG	C	992.91	PASS	AC=2;AF=0.038;AN=52;BaseQRankSum=3.817;DP=184;FS=22.897;HRun=12;HaplotypeScore=48.4937;InbreedingCoeff=0.3389;MQ=70.97;MQ0=0;MQRankSum=-1.467;QD=38.19;ReadPosRankSum=2.669;VQSLOD=0.3079;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:11:13.86:0,14,367	0/0:3,0:3:3.01:0,3,74	./.	0/0:5,0:5:6.02:0,6,153	0/0:3,0:4:6.02:0,6,195	0/0:9,0:9:12.03:0,12,289	0/0:7,0:7:21.06:0,21,665	1/1:4,22:26:56.33:1085,56,0	0/0:7,0:7:18.06:0,18,620	0/0:5,0:4:6.02:0,6,219	0/0:7,0:7:6.02:0,6,145	0/0:6,0:6:9.03:0,9,307	0/0:6,0:7:15.05:0,15,444	0/0:5,0:5:12.04:0,12,408	0/0:4,0:5:9.03:0,9,312	0/0:2,0:2:1.25:0,1,3	0/0:12,0:12:30.08:0,30,973	0/0:11,0:13:30.06:0,30,1005	0/0:2,0:4:12.04:0,12,434	0/0:3,0:3:3.01:0,3,124	0/0:10,0:11:18.50:0,19,441	0/0:2,0:2:6.02:0,6,134	0/0:1,0:1:3.01:0,3,74	0/0:4,0:4:8.99:0,9,208	0/0:4,0:4:6.02:0,6,129	0/0:6,0:6:2.99:0,3,76	0/0:7,0:10:21.07:0,21,624	./.
chr10	65008377	.	GACAC	G	14449.01	PASS	AB=0.589;AC=39;AF=0.696;AN=56;BaseQRankSum=2.342;DP=820;FS=0.350;HRun=0;HaplotypeScore=163.0743;InbreedingCoeff=0.8652;MQ=60.74;MQ0=9;MQRankSum=3.028;QD=24.00;ReadPosRankSum=4.457;VQSLOD=4.6785;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:13,3:43:78.29:78,0,223	1/1:3,9:15:17.47:409,17,0	0/0:23,0:11:15.05:0,15,295	0/0:21,1:15:19.24:0,19,306	0/0:20,0:22:42.77:0,43,751	1/1:12,19:31:54.13:812,54,0	1/1:15,23:40:33.09:631,33,0	0/0:34,0:33:54.62:0,55,939	0/0:12,0:31:47.09:0,47,225	1/1:14,17:32:28.37:887,28,0	1/1:10,16:26:36.12:590,36,0	1/1:15,22:41:69.21:1067,69,0	0/0:34,0:37:75.24:0,75,1734	1/1:5,14:20:39.13:618,39,0	1/1:13,31:46:81.27:1306,81,0	1/1:9,26:38:59.58:1068,60,0	1/1:5,19:26:51.16:793,51,0	1/1:11,6:17:1.70:183,2,0	1/1:6,8:16:29.78:383,30,0	1/1:8,26:35:17.22:909,17,0	1/1:16,30:46:52.40:1259,52,0	1/1:12,22:36:8.48:688,8,0	0/0:17,0:19:44.57:0,45,854	0/0:25,0:29:68.17:0,68,1435	1/1:6,16:24:39.13:639,39,0	1/1:7,22:32:52.39:1093,52,0	1/1:8,16:24:18.89:546,19,0	1/1:2,11:13:30.10:491,30,0
chr10	65008401	.	CACAA	C	5280.16	PASS	AB=0.993;AC=20;AF=0.357;AN=56;BaseQRankSum=13.770;DP=888;FS=33.188;HRun=0;HaplotypeScore=206.2831;InbreedingCoeff=-0.4284;MQ=58.68;MQ0=10;MQRankSum=1.974;QD=8.95;ReadPosRankSum=14.678;VQSLOD=0.8230;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:8.39:0,8,634	0/1:13,0:13:34.61:151,0,35	0/0:40,0:21:55.99:0,56,812	0/0:33,0:22:28.94:0,29,676	0/0:22,0:22:56.56:0,57,943	0/1:32,0:32:99:265,0,205	0/1:40,0:40:99:215,0,243	0/0:31,0:30:77.53:0,78,1254	0/0:35,0:35:86.87:0,87,757	0/1:27,1:28:73.40:374,0,73	0/1:18,0:18:64.13:228,0,64	0/1:39,0:39:99:389,0,222	0/0:35,0:35:96.23:0,96,2122	0/1:22,0:22:65.44:256,0,65	0/1:44,0:44:99:466,0,184	0/1:42,0:42:99:378,0,212	0/1:29,0:29:99:286,0,107	0/1:18,0:18:51.83:52,0,190	0/1:19,0:18:94.78:95,0,131	0/1:43,0:43:99:318,0,287	0/1:65,1:65:99:490,0,457	0/1:32,1:33:99:273,0,209	0/0:20,0:20:48.09:0,48,968	0/0:33,0:33:93.14:0,93,1802	0/1:24,1:25:69.10:262,0,69	0/1:35,0:35:99:418,0,129	0/1:32,0:32:99:166,0,310	1/1:12,0:12:5.86:197,6,0
chr10	65008837	.	TAA	T	531.62	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=6.408;DP=249;FS=3.525;HRun=2;HaplotypeScore=37.8254;InbreedingCoeff=0.3875;MQ=80.08;MQ0=0;MQRankSum=-4.099;QD=25.32;ReadPosRankSum=-1.115;VQSLOD=1.9136;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:51.16:0,51,987	0/0:4,0:4:12.04:0,12,244	0/1:7,0:5:8.21:8,0,67	0/0:10,0:10:14.13:0,14,248	0/0:11,0:11:33.11:0,33,661	0/0:4,0:4:9.03:0,9,183	0/0:3,0:3:9.03:0,9,183	1/1:1,13:14:42.14:624,42,0	0/0:3,0:3:9.03:0,9,183	0/0:6,0:6:18.06:0,18,360	0/0:9,0:9:27.09:0,27,548	0/0:1,0:1:3.01:0,3,59	0/0:2,0:2:6.02:0,6,122	0/0:4,0:4:12.04:0,12,243	0/0:4,0:4:12.02:0,12,207	0/0:6,0:6:18.06:0,18,366	0/0:35,0:35:99:0,105,2001	0/0:17,0:17:51.18:0,51,1030	0/0:13,0:13:39.13:0,39,775	0/0:7,0:7:21.07:0,21,426	0/0:5,0:5:15.03:0,15,264	0/0:1,0:1:3.01:0,3,56	0/0:6,0:6:18.06:0,18,363	0/0:2,0:2:6.01:0,6,86	0/0:17,0:17:51.18:0,51,1025	0/0:19,0:19:57.20:0,57,1154	0/0:10,0:10:30.07:0,30,524	0/0:12,0:12:36.12:0,36,731
chr10	65008847	.	TAA	T	511.54	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.732;DP=259;FS=5.408;HRun=3;HaplotypeScore=41.2575;InbreedingCoeff=0.6183;MQ=87.49;MQ0=0;MQRankSum=-3.019;QD=23.25;ReadPosRankSum=-2.940;VQSLOD=0.6224;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:48.14:0,48,906	0/0:4,0:4:12.04:0,12,239	1/1:9,0:7:4.83:22,5,0	0/0:15,0:14:14.64:0,15,206	0/0:12,0:12:36.11:0,36,684	0/0:4,0:4:9.03:0,9,152	0/0:4,0:4:12.02:0,12,202	1/1:0,13:13:39.13:599,39,0	0/0:3,0:3:9.03:0,9,180	0/0:4,0:4:12.04:0,12,239	0/0:8,0:8:24.08:0,24,479	0/0:2,0:2:6.02:0,6,106	0/0:2,0:2:6.02:0,6,107	0/0:4,0:4:12.04:0,12,240	0/0:4,0:4:12.04:0,12,240	0/0:7,0:7:21.07:0,21,420	0/0:35,0:35:99:0,105,2086	0/0:20,0:20:60.21:0,60,1179	0/0:14,0:14:42.14:0,42,826	0/0:7,0:7:21.06:0,21,382	0/0:5,0:5:15.05:0,15,282	0/0:2,0:2:5.98:0,6,79	0/0:4,0:4:12.04:0,12,234	0/0:1,0:1:3.01:0,3,46	0/0:16,0:16:48.15:0,48,917	0/0:19,0:19:57.20:0,57,1139	0/0:8,0:8:24.08:0,24,464	0/0:17,0:17:51.17:0,51,1010
chr10	65008869	.	A	AT	248.28	PASS	AB=0.947;AC=3;AF=0.054;AN=56;BaseQRankSum=5.728;DP=283;FS=15.387;HRun=8;HaplotypeScore=37.1169;InbreedingCoeff=0.4596;MQ=91.36;MQ0=1;MQRankSum=-1.974;QD=8.01;ReadPosRankSum=-3.601;VQSLOD=-0.6483;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:45.02:0,45,412	0/0:4,0:4:12.01:0,12,110	0/1:17,1:13:1.71:2,0,151	0/0:16,0:14:16.18:0,16,136	0/0:12,0:12:35.96:0,36,319	0/0:5,0:5:15.01:0,15,137	0/0:5,0:5:14.93:0,15,127	1/1:4,9:13:30.09:342,30,0	0/0:5,0:5:11.99:0,12,106	0/0:3,0:3:9:0,9,82	0/0:8,0:8:21.01:0,21,192	0/0:3,0:3:9:0,9,82	0/0:2,0:2:6:0,6,55	0/0:2,0:2:6:0,6,55	0/0:4,0:4:9:0,9,82	0/0:9,0:9:24.01:0,24,220	0/0:31,0:31:83.99:0,84,758	0/0:25,0:25:69.02:0,69,626	0/0:19,0:19:45:0,45,405	0/0:9,0:9:24.01:0,24,219	0/0:5,0:5:15:0,15,133	0/0:3,0:3:9:0,9,82	0/0:4,0:4:6:0,6,55	0/0:3,0:3:9:0,9,82	0/0:16,0:16:45.02:0,45,412	0/0:17,0:17:51.02:0,51,464	0/0:11,0:11:27.01:0,27,247	0/0:14,0:14:39.01:0,39,357
chr10	65009086	.	CCTTT	C	235.61	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-0.014;DP=465;FS=1.254;HRun=0;HaplotypeScore=133.0165;InbreedingCoeff=0.8573;MQ=56.72;MQ0=5;MQRankSum=0.647;QD=21.42;ReadPosRankSum=-2.845;VQSLOD=3.1860;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:30:78.24:0,78,1885	0/0:5,0:5:15.05:0,15,404	0/0:32,0:10:7.09:0,7,452	0/0:50,0:24:55.27:0,55,976	0/0:17,0:17:51.17:0,51,1300	0/0:19,0:18:48.12:0,48,1176	0/0:14,0:14:36.10:0,36,820	1/1:1,10:11:27.04:330,27,0	0/0:11,0:11:30.09:0,30,714	0/0:15,0:15:45.06:0,45,846	0/0:13,0:13:36.52:0,37,663	0/0:15,0:15:45.07:0,45,994	0/0:4,0:4:12.04:0,12,324	0/0:14,0:14:38.67:0,39,926	0/0:14,0:14:42.14:0,42,908	0/0:15,0:14:39.13:0,39,946	0/0:23,0:23:57.59:0,58,1149	0/0:15,0:15:26.85:0,27,811	0/0:24,0:24:63.18:0,63,1442	0/0:8,0:8:21.07:0,21,492	0/0:10,0:10:24.05:0,24,527	0/0:7,0:7:15.05:0,15,282	0/0:6,0:6:18.06:0,18,422	0/0:22,0:22:63.64:0,64,1480	0/0:24,0:24:69.19:0,69,1576	0/0:15,0:14:42.06:0,42,852	0/0:18,0:16:50.99:0,51,833	0/0:13,0:13:36.12:0,36,963
chr10	65009099	.	T	TTTTC	5394.94	PASS	AB=1.000;AC=39;AF=0.780;AN=50;BaseQRankSum=4.025;DP=475;FS=7.651;HRun=0;HaplotypeScore=121.7265;InbreedingCoeff=0.3140;MQ=47.46;MQ0=8;MQRankSum=-4.049;QD=15.15;ReadPosRankSum=0.076;VQSLOD=3.8344;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:14,21:34:1.39:1007,1,0	./.	./.	./.	0/0:18,0:18:36.12:0,36,555	0/1:19,0:18:29.78:142,0,30	1/1:18,0:18:0.01:173,0,0	1/1:15,0:13:0.47:1,0,0	1/1:3,7:10:21.07:489,21,0	1/1:13,0:13:17.91:160,18,0	0/1:15,0:15:3.78:287,0,4	1/1:13,0:13:12.04:150,12,0	0/0:5,0:5:9.03:0,9,140	1/1:14,0:14:12.04:169,12,0	1/1:14,0:14:24.08:345,24,0	0/1:16,0:15:6.63:30,0,7	1/1:28,0:28:31.55:432,32,0	1/1:14,0:14:18.02:223,18,0	1/1:25,0:24:24.03:313,24,0	1/1:10,0:10:15.05:185,15,0	1/1:7,0:7:3.01:38,3,0	0/1:7,0:7:30.23:151,0,30	0/1:7,0:7:15.63:16,0,78	0/0:25,0:25:33.64:0,34,709	1/1:27,0:27:26.95:319,27,0	1/1:17,0:15:24.02:337,24,0	1/1:18,0:17:32.93:348,33,0	1/1:14,0:14:6.01:78,6,0
chr10	65009270	.	A	AT	1174.34	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=1.490;DP=458;FS=5.611;HRun=5;HaplotypeScore=44.8840;InbreedingCoeff=0.9252;MQ=65.75;MQ0=0;MQRankSum=2.950;QD=31.74;ReadPosRankSum=-4.366;VQSLOD=2.0766;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:66.12:0,66,691	0/0:6,0:6:15.04:0,15,161	0/0:8,0:7:15.03:0,15,160	0/0:6,0:6:12.03:0,12,129	0/0:17,0:17:42.08:0,42,442	0/0:21,0:21:51.12:0,51,541	0/0:13,0:13:36.08:0,36,380	1/1:4,33:37:99:1269,99,0	0/0:10,0:10:27:0,27,276	0/0:19,0:19:48.12:0,48,516	0/0:22,0:22:57.12:0,57,603	0/0:9,0:9:21.05:0,21,226	0/0:16,0:16:42.09:0,42,443	0/0:13,0:13:33.08:0,33,355	0/0:19,0:19:57.10:0,57,600	0/0:17,0:17:45.11:0,45,483	0/0:14,0:14:39.05:0,39,398	0/0:12,0:12:30.04:0,30,311	0/0:14,0:14:39.08:0,39,408	0/0:20,0:20:57.14:0,57,612	0/0:19,0:19:57.12:0,57,604	0/0:8,0:8:21.05:0,21,225	0/0:15,0:15:42.11:0,42,451	0/0:19,0:19:57.12:0,57,604	0/0:21,0:21:60.15:0,60,645	0/0:19,0:19:54.14:0,54,580	0/0:27,0:26:75.19:0,75,804	0/0:11,0:11:18.04:0,18,193
chr10	65009562	.	CTGTG	C	4963.38	PASS	AB=0.738;AC=35;AF=0.648;AN=54;BaseQRankSum=3.786;DP=537;FS=4.841;HRun=0;HaplotypeScore=122.9297;InbreedingCoeff=0.6836;MQ=55.62;MQ0=17;MQRankSum=-2.580;QD=15.76;ReadPosRankSum=4.233;VQSLOD=4.4644;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:33:12.02:0,12,214	1/1:5,2:8:9.03:125,9,0	0/0:29,0:15:0:0,0,0	./.	0/0:19,0:18:18.06:0,18,374	1/1:6,8:16:21.06:313,21,0	1/1:11,6:19:18.05:266,18,0	0/0:28,0:27:21.07:0,21,446	0/0:16,0:18:24.08:0,24,422	1/1:10,6:17:18.05:263,18,0	1/1:8,4:12:12.04:187,12,0	1/1:2,5:8:15.04:218,15,0	0/0:19,0:19:21.54:0,22,493	0/1:8,2:12:6.52:23,0,7	1/1:13,10:25:30.09:437,30,0	0/1:8,9:20:13.09:491,0,13	1/1:13,7:18:21.07:333,21,0	0/1:14,4:16:99:234,0,119	1/1:13,1:13:9.02:123,9,0	1/1:18,7:28:26.92:379,27,0	1/1:29,4:33:15:190,15,0	1/1:6,6:13:21.07:323,21,0	0/0:12,0:13:20.54:0,21,391	0/0:21,0:26:44.36:0,44,895	1/1:5,9:14:27.08:407,27,0	1/1:7,6:13:21.06:314,21,0	1/1:13,3:18:18.05:246,18,0	1/1:4,0:3:6.02:90,6,0
chr10	65009613	.	CTCTGTGTGTG	C	9514.56	PASS	AB=0.611;AC=37;AF=0.661;AN=56;BaseQRankSum=6.320;DP=538;FS=2.864;HRun=0;HaplotypeScore=172.8855;InbreedingCoeff=0.8335;MQ=46.42;MQ0=16;MQRankSum=-6.449;QD=30.69;ReadPosRankSum=-2.887;VQSLOD=4.1229;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:18.53:0,19,843	1/1:2,6:8:11.70:291,12,0	0/0:42,0:10:11.18:0,11,260	0/0:64,0:14:16.72:0,17,310	0/0:11,0:11:24.05:0,24,912	1/1:10,12:23:26.99:587,27,0	1/1:8,12:20:17.98:477,18,0	0/0:1,0:1:3.01:0,3,75	0/0:18,0:17:9.71:0,10,180	1/1:8,17:25:61.02:1142,61,0	1/1:3,12:17:36.06:752,36,0	1/1:7,0:9:14.98:227,15,0	0/0:18,0:18:47.87:0,48,2150	1/1:2,4:6:8.39:210,8,0	1/1:9,7:16:15.02:262,15,0	1/1:11,9:23:38.98:632,39,0	1/1:7,12:19:15.98:583,16,0	0/1:4,6:11:68.47:407,0,68	1/1:13,1:13:29.90:330,30,0	1/1:12,10:22:18.34:346,18,0	1/1:25,6:31:55.58:541,56,0	1/1:9,4:15:14.30:406,14,0	0/0:17,0:16:35.85:0,36,1120	0/0:33,0:32:71.57:0,72,2595	1/1:8,5:15:27.03:453,27,0	1/1:7,16:23:62.77:1309,63,0	1/1:5,4:10:23.70:370,24,0	1/1:1,2:2:6.02:191,6,0
chr10	65009829	.	GGTGTGTGTGT	G	8037.24	PASS	AB=0.757;AC=35;AF=0.625;AN=56;BaseQRankSum=5.831;DP=562;FS=0.000;HRun=0;HaplotypeScore=162.6533;InbreedingCoeff=0.5595;MQ=58.04;MQ0=7;MQRankSum=-7.352;QD=21.61;ReadPosRankSum=-0.091;VQSLOD=3.5543;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:34:11.94:0,12,152	1/1:8,6:14:11.95:236,12,0	0/0:18,0:10:6.02:0,6,163	0/0:29,0:14:6.02:0,6,214	0/0:26,0:30:36.12:0,36,1348	1/1:12,12:24:9.03:268,9,0	1/1:10,13:22:5.76:179,6,0	1/1:16,11:26:20.51:262,21,0	0/0:3,0:18:6.02:0,6,191	1/1:7,9:16:15.01:320,15,0	0/1:4,8:13:7.94:238,0,8	1/1:7,10:18:26.83:712,27,0	0/0:12,0:13:15.05:0,15,692	1/1:4,10:14:12.04:359,12,0	1/1:6,15:21:30.57:902,31,0	1/1:7,11:18:12.04:360,12,0	0/1:15,8:24:1.94:345,0,2	0/1:14,9:23:99:223,0,115	1/1:14,0:13:12.03:277,12,0	1/1:9,12:21:21.07:630,21,0	0/1:15,0:13:3.08:19,0,3	1/1:5,12:17:21.07:629,21,0	0/0:11,0:12:12.02:0,12,348	0/0:32,0:34:60.05:0,60,2390	1/1:4,7:11:12.04:338,12,0	0/1:18,9:27:5.90:455,0,6	1/1:6,17:24:42.05:1193,42,0	1/1:4,3:7:3.01:90,3,0
chr10	65010632	.	TCTCTGA	T	1867.32	PASS	AB=0.991;AC=31;AF=0.674;AN=46;BaseQRankSum=-2.188;DP=476;FS=39.062;HRun=0;HaplotypeScore=104.9578;InbreedingCoeff=-0.2713;MQ=39.67;MQ0=55;MQRankSum=-0.098;QD=5.68;ReadPosRankSum=-1.905;VQSLOD=0.0105;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:20,0:18:46.45:46,0,172	1/1:4,0:4:3.01:54,3,0	./.	./.	1/1:17,1:17:9.53:79,10,0	1/1:22,0:22:6.02:74,6,0	1/1:18,0:17:5.66:70,6,0	1/1:7,0:4:8.51:60,9,0	1/1:12,0:9:0.88:2,1,0	0/1:14,0:12:57.83:188,0,58	./.	1/1:20,0:20:3.01:34,3,0	0/1:9,0:9:2.86:3,0,82	1/1:17,0:16:3.01:34,3,0	./.	1/1:17,0:15:8.48:78,8,0	0/1:18,1:17:13.42:31,0,13	0/1:5,0:5:12.37:60,0,12	0/1:16,0:15:60.43:301,0,60	0/1:13,0:12:29.24:56,0,29	0/0:25,0:22:1.72:0,2,4	1/1:22,1:22:0.09:178,0,0	0/1:19,1:19:11.29:84,0,11	0/0:21,0:19:3.56:0,4,116	0/1:21,0:21:55.43:197,0,55	0/1:17,0:17:99:286,0,106	0/1:17,0:17:70.91:84,0,71	./.
chr10	65010633	.	CTCTGAG	C	2839.66	PASS	AB=1.000;AC=33;AF=0.717;AN=46;BaseQRankSum=-4.188;DP=481;FS=1.578;HRun=0;HaplotypeScore=100.8702;InbreedingCoeff=0.0772;MQ=39.68;MQ0=57;MQRankSum=-1.347;QD=8.93;ReadPosRankSum=0.764;VQSLOD=2.0448;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:20,0:18:24.73:25,0,218	1/1:0,4:4:3.01:72,3,0	./.	./.	0/1:18,0:17:8.26:8,0,57	1/1:4,17:22:6.02:109,6,0	1/1:19,0:18:5.60:53,6,0	0/1:7,0:4:4.79:49,0,5	0/0:12,0:9:2.80:0,3,13	1/1:13,0:12:4.50:343,5,0	./.	1/1:19,0:19:3.01:51,3,0	0/1:10,0:10:2.08:2,0,142	1/1:17,0:16:3.01:52,3,0	./.	1/1:17,0:15:8.74:129,9,0	1/1:20,0:18:2.49:17,2,0	1/1:5,0:5:11.93:150,12,0	1/1:16,0:15:12.71:455,13,0	1/1:13,0:12:8.70:125,9,0	0/0:24,0:21:1.72:0,2,4	1/1:22,0:22:19.62:351,20,0	0/1:21,0:20:11:11,0,153	0/0:21,0:19:23.80:0,24,263	1/1:20,0:20:1.86:332,2,0	0/1:17,0:17:4.14:526,0,4	0/1:17,0:17:8.52:112,0,9	./.
chr10	65010634	.	TCTGA	T	2213.42	PASS	AB=0.977;AC=38;AF=0.792;AN=48;BaseQRankSum=0.494;DP=480;FS=21.626;HRun=0;HaplotypeScore=96.1642;InbreedingCoeff=0.1134;MQ=40.00;MQ0=57;MQRankSum=0.535;QD=6.75;ReadPosRankSum=0.502;VQSLOD=0.6323;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:20,0:18:82.97:83,0,97	1/1:4,0:4:3.01:38,3,0	./.	./.	1/1:19,0:18:9.53:79,10,0	1/1:22,0:22:6.02:70,6,0	1/1:19,0:18:5.66:70,6,0	1/1:7,0:4:8.51:60,9,0	1/1:5,6:8:0.89:2,1,0	1/1:12,0:12:4.47:198,4,0	0/0:16,0:15:0.47:0,0,1	1/1:19,0:19:3.01:34,3,0	0/1:9,1:10:46.58:47,0,55	1/1:17,0:16:3.01:34,3,0	./.	1/1:17,0:15:8.74:103,9,0	1/1:21,0:19:2.75:17,3,0	1/1:5,0:5:11.99:126,12,0	1/1:16,0:15:14.95:327,15,0	1/1:13,0:12:9.72:91,10,0	0/0:25,0:22:1.72:0,2,4	1/1:22,0:21:19.60:204,20,0	1/1:20,1:20:9.83:97,10,0	0/0:22,0:20:2.52:0,3,61	1/1:19,0:19:10.40:219,10,0	0/1:17,0:17:4:333,0,4	0/1:17,0:17:4.84:96,0,5	./.
chr10	65010635	.	CTGAG	C	3456.72	PASS	AB=1.000;AC=35;AF=0.729;AN=48;BaseQRankSum=-3.482;DP=481;FS=5.118;HRun=0;HaplotypeScore=92.1749;InbreedingCoeff=0.2380;MQ=39.93;MQ0=57;MQRankSum=-1.577;QD=10.97;ReadPosRankSum=1.340;VQSLOD=2.1554;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:20,0:18:18.30:18,0,131	1/1:4,0:4:3.01:39,3,0	./.	./.	0/1:19,0:18:8.26:8,0,57	1/1:20,1:22:6:58,6,0	1/1:19,0:18:5.59:53,6,0	0/1:7,0:4:4.79:49,0,5	0/0:11,0:8:2.80:0,3,13	1/1:1,1:12:29.94:412,30,0	0/0:3,12:15:0.47:0,0,1	1/1:3,16:19:3.01:51,3,0	0/1:11,0:11:17.51:18,0,119	1/1:2,15:16:3.01:52,3,0	./.	1/1:2,15:15:8.74:147,9,0	1/1:4,16:18:0.02:0,0,0	1/1:5,0:5:12:189,12,0	1/1:4,11:15:41.78:535,42,0	1/1:11,2:12:11.87:189,12,0	0/0:4,20:21:1.72:0,2,4	1/1:18,3:21:21.06:372,21,0	0/1:21,0:20:8.01:8,0,173	0/0:22,0:20:24.81:0,25,212	1/1:17,2:19:29.04:403,29,0	1/1:0,16:16:42.04:672,42,0	1/1:4,13:17:14.98:182,15,0	./.
chr10	65010636	.	TGA	T	2764.77	PASS	AB=0.986;AC=41;AF=0.854;AN=48;BaseQRankSum=-0.233;DP=474;FS=4.023;HRun=0;HaplotypeScore=86.2926;InbreedingCoeff=0.1689;MQ=40.19;MQ0=57;MQRankSum=-0.270;QD=8.13;ReadPosRankSum=-1.830;VQSLOD=2.7877;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:19,0:17:18.73:94,0,19	1/1:4,0:4:3.40:18,3,0	./.	./.	1/1:19,0:18:9.53:79,10,0	1/1:22,0:22:5.91:38,6,0	1/1:4,15:18:5.83:70,6,0	1/1:7,0:4:8.51:60,9,0	1/1:11,0:8:0.89:2,1,0	1/1:12,0:12:29.92:267,30,0	0/0:16,0:15:0.47:0,0,1	1/1:17,1:18:3.01:34,3,0	0/1:11,0:11:18.56:24,0,19	1/1:16,0:15:3.01:34,3,0	./.	1/1:17,0:15:8.83:86,9,0	1/1:20,0:18:0.12:0,0,0	1/1:5,0:5:11.99:127,12,0	1/1:13,2:14:41.84:426,42,0	1/1:9,3:11:15.05:190,15,0	0/0:23,0:20:2.29:0,2,5	1/1:17,4:21:20.74:223,21,0	1/1:21,1:21:13.34:122,13,0	0/1:21,1:20:13.62:31,0,14	1/1:16,0:16:30.06:329,30,0	1/1:16,0:16:42:427,42,0	1/1:14,2:16:15.05:193,15,0	./.
chr10	65011850	.	TC	T	890.96	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.256;DP=667;FS=32.852;HRun=4;HaplotypeScore=103.4085;InbreedingCoeff=0.9988;MQ=82.16;MQ0=0;MQRankSum=-0.668;QD=29.70;ReadPosRankSum=-3.596;VQSLOD=0.6538;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:81.18:0,81,1062	0/0:9,0:9:27.09:0,27,376	0/0:33,0:33:90.26:0,90,1229	0/0:19,0:19:47.05:0,47,583	0/0:23,0:23:69.19:0,69,908	0/0:27,0:27:81.26:0,81,1110	0/0:24,0:24:60.19:0,60,818	1/1:1,29:30:87.20:986,87,0	0/0:25,0:25:72.23:0,72,984	0/0:39,0:39:99:0,105,1375	0/0:20,0:20:60.20:0,60,829	0/0:21,0:21:60.15:0,60,783	0/0:21,0:21:60.20:0,60,834	0/0:14,0:14:39.12:0,39,526	0/0:19,0:19:57.19:0,57,793	0/0:19,0:19:57.17:0,57,763	0/0:32,0:32:93.27:0,93,1257	0/0:25,0:25:72.24:0,72,999	0/0:14,0:14:39.09:0,39,504	0/0:27,0:27:78.26:0,78,1085	0/0:30,0:30:84.21:0,84,1128	0/0:17,0:17:51.16:0,51,695	0/0:21,0:20:60.14:0,60,779	0/0:39,0:39:99:0,111,1527	0/0:23,0:23:63.21:0,63,876	0/0:25,0:25:66.21:0,66,891	0/0:23,0:23:63.21:0,63,875	0/0:17,0:17:47.68:0,48,628
chr10	65011931	.	T	TCACACA	5172.09	PASS	AB=0.841;AC=40;AF=0.769;AN=52;BaseQRankSum=-1.863;DP=585;FS=0.000;HRun=0;HaplotypeScore=165.0755;InbreedingCoeff=0.5939;MQ=65.81;MQ0=8;MQRankSum=-3.519;QD=12.23;ReadPosRankSum=-3.946;VQSLOD=2.6647;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:21:4.10:0,4,15	1/1:4,3:10:11.58:272,12,0	./.	./.	0/1:15,0:27:0.63:8,0,1	1/1:22,6:32:16.58:266,17,0	1/1:11,1:15:9.03:275,9,0	1/1:25,0:25:5.98:100,6,0	0/0:5,0:20:19.83:0,20,255	1/1:16,0:22:15.02:199,15,0	1/1:10,4:18:3.01:96,3,0	1/1:13,3:20:17.60:480,18,0	0/0:15,0:18:21.07:0,21,389	1/1:12,5:19:2.84:38,3,0	0/0:8,0:24:12.67:0,13,138	1/1:9,6:19:15.05:459,15,0	1/1:23,0:24:24.54:431,25,0	1/1:8,3:12:8.18:222,8,0	1/1:12,0:11:3.01:42,3,0	1/1:10,6:20:9.03:289,9,0	1/1:20,0:24:3.48:39,3,0	1/1:12,8:22:15.03:428,15,0	0/1:15,0:16:14.84:15,0,370	0/0:23,0:26:35.94:0,36,690	1/1:15,4:25:9.02:225,9,0	1/1:12,4:22:30.15:460,30,0	1/1:13,4:21:24.04:583,24,0	1/1:7,2:9:11.07:243,11,0
chr10	65012291	.	TGGTGTG	T	489.93	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.104;DP=600;FS=14.547;HRun=0;HaplotypeScore=121.0698;InbreedingCoeff=0.9927;MQ=62.94;MQ0=11;MQRankSum=-4.719;QD=27.22;ReadPosRankSum=-3.382;VQSLOD=2.0022;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:25:72.20:0,72,2319	0/0:9,0:9:24.08:0,24,831	0/0:23,0:18:54.16:0,54,1632	0/0:26,0:24:69.23:0,69,2133	0/0:15,0:15:33.11:0,33,1194	0/0:29,0:29:81.25:0,81,2770	0/0:16,0:16:45.11:0,45,1442	1/1:1,17:12:30.02:584,30,0	0/0:27,0:27:78.26:0,78,2773	0/0:26,0:26:69.23:0,69,2364	0/0:15,0:15:39.12:0,39,1268	0/0:24,0:24:69.09:0,69,2140	0/0:29,0:29:72.22:0,72,2453	0/0:22,0:22:66.18:0,66,2251	0/0:25,0:25:75.23:0,75,2476	0/0:23,0:23:63.22:0,63,2308	0/0:22,0:22:60.19:0,60,2054	0/0:11,0:11:33.06:0,33,1083	0/0:15,0:15:42.12:0,42,1323	0/0:18,0:17:39.12:0,39,1294	0/0:21,0:20:54.15:0,54,1809	0/0:25,0:25:60.21:0,60,2154	0/0:17,0:17:39.13:0,39,1379	0/0:22,0:22:63.22:0,63,2137	0/0:8,0:8:21.05:0,21,669	0/0:24,0:24:72.24:0,72,2540	0/0:41,0:41:99:0,114,3743	0/0:23,0:22:63.22:0,63,2228
chr10	65013210	.	AT	A	775.61	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.552;DP=294;FS=1.563;HRun=6;HaplotypeScore=31.4358;InbreedingCoeff=0.3576;MQ=75.68;MQ0=2;MQRankSum=0.409;QD=24.24;ReadPosRankSum=-3.439;VQSLOD=1.3349;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:57.16:0,57,732	0/0:1,0:1:3.01:0,3,39	0/0:14,0:10:6.55:0,7,107	0/0:17,0:13:26.73:0,27,351	0/0:9,0:9:27.07:0,27,339	0/0:20,0:20:54.18:0,54,710	0/0:4,0:4:3.01:0,3,39	1/1:5,27:32:81.20:869,81,0	0/0:5,0:5:15.05:0,15,197	0/0:15,0:15:42.14:0,42,552	0/0:9,0:9:18.06:0,18,237	0/0:3,0:3:6.02:0,6,79	0/0:4,0:4:12.04:0,12,157	0/0:1,0:1:3.01:0,3,39	0/0:3,0:3:9.03:0,9,118	0/0:1,0:1:3.01:0,3,39	0/0:19,0:19:51.17:0,51,668	0/0:23,0:22:63.20:0,63,825	0/0:17,0:16:42.11:0,42,535	0/0:8,0:8:21.07:0,21,276	0/0:2,0:2:3.01:0,3,39	0/0:1,0:1:3.01:0,3,39	0/0:3,0:3:6.02:0,6,79	0/0:5,0:5:15.05:0,15,197	0/0:15,0:15:36.12:0,36,472	0/0:10,0:10:27.09:0,27,355	0/0:11,0:11:33.11:0,33,432	0/0:22,0:22:60.20:0,60,789
chr10	65015007	.	GTGCGTGTGTGTGTA	G	1034.64	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-0.061;DP=604;FS=8.790;HRun=0;HaplotypeScore=199.0317;InbreedingCoeff=0.9574;MQ=57.55;MQ0=17;MQRankSum=-1.123;QD=18.81;ReadPosRankSum=-2.292;VQSLOD=1.5635;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:24:39.07:540,39,0	0/0:8,0:8:24.08:0,24,763	0/0:47,0:20:50.48:0,50,684	0/0:38,0:21:33.93:0,34,522	0/0:19,0:19:54.17:0,54,2335	0/0:23,0:23:42.10:0,42,1212	0/0:27,0:27:59.86:0,60,1559	1/1:14,0:11:27.07:392,27,0	1/1:0,16:16:6.02:238,6,0	0/0:31,0:29:47.82:0,48,2161	0/0:15,0:15:38.98:0,39,1130	0/0:22,0:21:41.27:0,41,1370	0/0:16,0:16:43.37:0,43,1141	0/0:12,0:12:33.11:0,33,869	0/0:16,0:16:36.05:0,36,1286	0/0:16,0:16:41.98:0,42,1153	0/0:30,0:28:72.63:0,73,2267	0/0:17,0:17:45.10:0,45,1495	0/0:14,0:12:32.99:0,33,526	0/0:16,0:16:33.08:0,33,944	0/0:62,0:60:99:0,119,4237	0/0:16,0:16:39.12:0,39,1520	0/0:9,0:9:27.03:0,27,1105	0/0:28,0:28:57.10:0,57,2018	0/0:19,0:19:45.06:0,45,1187	0/0:22,0:19:53.95:0,54,1453	0/0:16,0:16:36.36:0,36,955	0/0:10,0:10:19.43:0,19,544
chr10	65015021	.	A	ATG	2728.71	PASS	AB=0.863;AC=29;AF=0.558;AN=52;BaseQRankSum=-4.738;DP=624;FS=19.347;HRun=0;HaplotypeScore=89.8601;InbreedingCoeff=-0.0803;MQ=52.47;MQ0=19;MQRankSum=-1.164;QD=5.73;ReadPosRankSum=0.381;VQSLOD=1.4517;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:29:11.55:87,12,0	0/1:8,0:9:5.09:71,0,5	./.	./.	0/0:19,0:19:16.10:0,16,277	0/1:20,5:24:20.52:123,0,21	0/1:23,6:28:23.77:81,0,24	1/1:15,0:11:1.41:3,1,0	0/0:16,0:16:2.40:0,2,12	0/1:35,2:35:33.50:165,0,34	1/1:13,4:18:9.03:134,9,0	0/1:13,11:23:45.82:166,0,46	0/0:14,0:14:17.88:0,18,175	1/1:10,4:14:6.02:90,6,0	0/1:9,7:16:47.57:161,0,48	0/1:14,0:14:6.24:70,0,6	1/1:21,14:33:12.58:302,13,0	1/1:12,8:20:15.05:212,15,0	0/1:16,1:14:16.14:39,0,16	0/1:12,6:18:22.71:162,0,23	0/1:65,2:66:53.64:375,0,54	0/1:20,0:20:19.50:155,0,20	0/0:9,0:10:15.34:0,15,146	0/0:25,0:30:41.84:0,42,424	0/1:17,5:22:34.45:117,0,34	1/1:12,10:18:20.12:227,20,0	0/1:8,5:15:46.39:75,0,46	1/1:6,3:9:6.49:79,6,0
chr10	65015659	.	T	TA	607.60	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-2.508;DP=603;FS=6.791;HRun=9;HaplotypeScore=61.9863;InbreedingCoeff=0.9150;MQ=74.48;MQ0=0;MQRankSum=-0.222;QD=22.50;ReadPosRankSum=-4.173;VQSLOD=2.7215;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:92.96:0,93,807	0/0:6,0:6:14.99:0,15,130	0/0:14,0:14:8.94:0,9,128	0/0:15,0:15:35.97:0,36,306	0/0:31,0:31:92.97:0,93,803	0/0:29,0:29:68.98:0,69,599	0/0:14,0:15:37.99:0,38,310	1/1:5,22:27:66.13:702,66,0	0/0:26,0:26:68.96:0,69,595	0/0:13,0:13:29.94:0,30,253	0/0:25,0:25:65.97:0,66,569	0/0:23,0:24:59.02:0,59,501	0/0:18,0:18:47.99:0,48,417	0/0:20,0:20:53.95:0,54,461	0/0:21,0:22:59.01:0,59,497	0/0:17,0:17:50.97:0,51,439	0/0:29,0:29:68.86:0,69,586	0/0:16,0:17:43.97:0,44,359	0/0:18,0:18:38.96:0,39,336	0/0:28,0:28:68.98:0,69,599	0/0:28,0:28:37.36:0,37,524	0/0:12,0:12:29.98:0,30,256	0/0:20,0:20:56.97:0,57,493	0/0:26,0:26:71.94:0,72,615	0/0:21,0:21:44.81:0,45,383	0/0:34,0:34:92.93:0,93,797	0/0:25,0:25:71.99:0,72,625	0/0:6,0:6:14.92:0,15,121
chr10	65015822	.	T	TC	1221.79	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-3.434;DP=570;FS=11.048;HRun=1;HaplotypeScore=58.0864;InbreedingCoeff=0.9795;MQ=64.48;MQ0=1;MQRankSum=-3.734;QD=33.02;ReadPosRankSum=-3.822;VQSLOD=1.2095;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:87.26:0,87,1152	0/0:8,0:8:24.06:0,24,302	0/0:17,0:15:28.96:0,29,362	0/0:16,0:15:32.82:0,33,384	0/0:24,0:24:69.19:0,69,898	0/0:31,0:31:84.24:0,84,1086	0/0:10,0:10:27.05:0,27,334	1/1:14,23:37:99:1317,102,0	0/0:26,0:25:75.23:0,75,988	0/0:19,0:19:48.11:0,48,608	0/0:17,0:17:48.13:0,48,618	0/0:18,0:18:48.16:0,48,669	0/0:14,0:14:39.11:0,39,506	0/0:13,0:13:36.12:0,36,488	0/0:18,0:18:50.83:0,51,645	0/0:16,0:16:48.15:0,48,642	0/0:31,0:30:84.23:0,84,1117	0/0:23,0:22:57.48:0,57,722	0/0:21,0:21:63.17:0,63,812	0/0:29,0:29:81.23:0,81,1041	0/0:17,0:17:48.14:0,48,636	0/0:12,0:12:36.11:0,36,481	0/0:11,0:11:33.10:0,33,431	0/0:11,0:11:30.09:0,30,402	0/0:26,0:26:78.22:0,78,1041	0/0:28,0:28:81.23:0,81,1056	0/0:34,0:34:99:0,102,1360	0/0:5,0:5:15.02:0,15,174
chr10	65016875	.	AAT	A	1579.18	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=7.287;DP=596;FS=4.876;HRun=0;HaplotypeScore=69.0306;InbreedingCoeff=0.9983;MQ=81.45;MQ0=1;MQRankSum=-1.453;QD=30.96;ReadPosRankSum=-1.318;VQSLOD=5.0030;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,17:17:42.14:619,42,0	0/0:10,0:10:30.10:0,30,562	0/0:18,0:18:54.18:0,54,981	0/0:16,0:16:45.15:0,45,774	0/0:29,0:29:87.28:0,87,1572	0/0:32,0:32:93.32:0,93,1733	0/0:14,0:14:42.12:0,42,724	1/1:2,21:23:57.14:794,57,0	1/1:0,10:10:21.07:309,21,0	0/0:27,0:27:78.27:0,78,1449	0/0:23,0:23:63.22:0,63,1179	0/0:17,0:17:51.17:0,51,954	0/0:25,0:25:72.23:0,72,1305	0/0:25,0:25:69.21:0,69,1195	0/0:13,0:13:39.13:0,39,722	0/0:19,0:19:54.17:0,54,980	0/0:18,0:18:54.17:0,54,961	0/0:25,0:25:72.25:0,72,1348	0/0:26,0:26:75.23:0,75,1333	0/0:35,0:35:99:0,102,1888	0/0:18,0:18:54.19:0,54,1011	0/0:19,0:19:54.16:0,54,949	0/0:19,0:19:54.17:0,54,968	0/0:16,0:16:48.14:0,48,865	0/0:23,0:23:66.23:0,66,1211	0/0:26,0:26:78.26:0,78,1427	0/0:32,0:31:96.33:0,96,1795	0/0:20,0:20:60.21:0,60,1124
chr10	65016974	.	G	GTTT	13585.05	PASS	AB=1.000;AC=43;AF=0.768;AN=56;BaseQRankSum=7.225;DP=593;FS=0.430;HRun=12;HaplotypeScore=162.3981;InbreedingCoeff=0.8929;MQ=58.76;MQ0=0;MQRankSum=-10.228;QD=29.60;ReadPosRankSum=-4.345;VQSLOD=1.3686;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:3,0:3:0:0,0,0	1/1:3,3:10:21.05:312,21,0	0/0:9,0:8:4.63:0,5,65	0/0:17,0:15:11.09:0,11,150	0/0:30,0:33:74.88:0,75,809	1/1:5,11:20:54.05:782,54,0	1/1:6,8:14:33.07:541,33,0	1/1:32,0:32:21.06:330,21,0	1/1:8,0:8:6.02:92,6,0	1/1:17,9:28:58.12:762,58,0	1/1:16,6:27:64.92:799,65,0	1/1:15,7:27:64.21:844,64,0	0/0:27,0:29:78.01:0,78,826	1/1:11,4:18:47.96:634,48,0	1/1:11,15:28:69.19:1128,69,0	1/1:12,6:22:48:617,48,0	1/1:11,3:14:18.01:238,18,0	1/1:4,4:9:8.99:130,9,0	1/1:9,3:13:21.02:305,21,0	1/1:17,12:32:83.98:1170,84,0	1/1:7,1:9:12.46:170,12,0	1/1:15,4:21:47.94:646,48,0	0/0:28,0:30:67.50:0,67,754	0/0:15,0:15:29.89:0,30,331	1/1:17,15:37:86.06:1212,86,0	1/1:15,12:27:59.11:863,59,0	1/1:19,15:40:99:1364,100,0	1/1:12,5:18:50.95:647,51,0
chr10	65016994	.	CACTT	C	14979.29	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=13.242;DP=490;FS=1.200;HRun=0;HaplotypeScore=121.2271;InbreedingCoeff=0.9626;MQ=71.23;MQ0=0;MQRankSum=-14.061;QD=46.09;ReadPosRankSum=3.146;VQSLOD=5.6717;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:4:12.04:0,12,322	1/1:1,8:9:24.08:463,24,0	0/0:16,0:15:45.11:0,45,1047	0/0:19,0:17:34.35:0,34,1036	0/0:28,0:28:81.23:0,81,2156	1/1:5,20:25:45.15:869,45,0	1/1:0,12:12:30.10:581,30,0	0/0:20,0:20:51.18:0,51,1348	0/0:6,0:6:18.06:0,18,491	1/1:6,23:29:72.13:1320,72,0	1/1:3,17:20:51.17:985,51,0	1/1:3,16:19:48.16:917,48,0	0/0:28,0:28:81.28:0,81,2088	1/1:2,14:16:39.13:754,39,0	1/1:4,12:16:36.12:690,36,0	1/1:2,14:16:39.13:750,39,0	1/1:2,6:8:15.05:290,15,0	1/1:2,1:3:3.01:58,3,0	1/1:1,10:11:30.10:581,30,0	1/1:2,26:28:69.24:1334,69,0	1/1:0,6:6:18.06:344,18,0	1/1:2,13:15:36.12:697,36,0	0/0:29,0:29:87.30:0,87,2350	0/0:14,0:14:39.07:0,39,944	1/1:4,20:24:63.22:1214,63,0	1/1:2,15:17:42.14:813,42,0	1/1:8,29:37:84.29:1623,84,0	1/1:2,12:14:36.12:697,36,0
chr10	65016995	.	ACTT	A	4917.64	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=15.741;DP=477;FS=1.637;HRun=0;HaplotypeScore=143.1592;InbreedingCoeff=0.9606;MQ=72.42;MQ0=0;MQRankSum=-14.631;QD=15.81;ReadPosRankSum=3.514;VQSLOD=4.9191;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:5:15.05:0,15,364	1/1:9,0:9:23.75:165,24,0	0/0:18,0:16:47.95:0,48,1021	0/0:18,0:16:45.13:0,45,992	0/0:28,0:28:84.27:0,84,1985	1/1:23,0:23:44.34:287,44,0	1/1:12,0:12:29.56:192,30,0	0/0:20,0:20:51.18:0,51,1251	0/0:6,0:6:18.06:0,18,443	1/1:28,1:29:12.69:364,13,0	1/1:20,0:20:50.33:335,50,0	1/1:16,0:16:46.83:297,47,0	0/0:28,0:28:81.28:0,81,1982	1/1:15,1:16:38.47:258,38,0	1/1:15,0:15:35.30:224,35,0	1/1:16,0:16:38.39:249,38,0	1/1:7,0:7:14.78:96,15,0	1/1:2,0:2:2.96:19,3,0	1/1:11,0:11:29.59:195,30,0	1/1:26,0:26:68.06:451,68,0	1/1:6,0:6:17.76:116,18,0	1/1:15,0:15:35.47:231,35,0	0/0:29,0:29:87.30:0,87,2141	0/0:14,0:14:39.13:0,39,898	1/1:22,1:23:62.16:413,62,0	1/1:16,0:16:41.39:270,41,0	1/1:34,2:36:65.89:523,66,0	1/1:12,1:13:35.48:231,35,0
chr10	65017575	.	T	TTGTGTGTGTGTG	9184.84	PASS	AB=0.913;AC=41;AF=0.732;AN=56;BaseQRankSum=-0.206;DP=739;FS=1.422;HRun=0;HaplotypeScore=264.8656;InbreedingCoeff=0.5601;MQ=55.98;MQ0=5;MQRankSum=-7.172;QD=15.75;ReadPosRankSum=-2.965;VQSLOD=2.9560;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:46,0:43:8.73:171,9,0	1/1:15,2:19:4.53:249,5,0	0/0:32,0:20:3.01:0,3,39	0/0:27,0:14:2.98:0,3,23	0/0:27,0:28:3.05:0,3,686	1/1:26,6:35:5.85:280,6,0	1/1:24,4:28:6.49:263,6,0	0/1:33,0:34:17.81:18,0,535	1/1:16,0:33:23.44:454,23,0	1/1:25,0:28:51.38:1826,51,0	0/1:16,1:18:0:1,0,0	1/1:19,4:25:11.82:503,12,0	0/0:22,0:22:36.52:0,37,1050	1/1:28,2:31:5.79:283,6,0	1/1:18,5:23:8.80:384,9,0	1/1:15,1:23:8.71:463,9,0	1/1:22,0:26:15.52:443,16,0	1/1:19,0:19:6.25:169,6,0	1/1:23,0:23:22.17:598,22,0	1/1:17,5:22:3.01:123,3,0	1/1:33,0:33:14.81:321,15,0	0/1:17,1:21:0.02:0,0,0	0/0:15,0:16:24.07:0,24,649	0/0:20,0:30:35.79:0,36,779	1/1:20,3:29:6.02:324,6,0	1/1:30,0:29:35.10:1089,35,0	1/1:20,5:25:22.47:1077,22,0	1/1:6,1:7:3.01:146,3,0
chr10	65017576	.	T	TAC	1052.83	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-5.003;DP=740;FS=2.285;HRun=0;HaplotypeScore=195.3938;InbreedingCoeff=0.9187;MQ=54.26;MQ0=6;MQRankSum=4.521;QD=30.97;ReadPosRankSum=-1.094;VQSLOD=4.1880;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:44:39.87:0,40,553	0/0:19,0:19:29.90:0,30,386	0/0:32,0:19:54.17:0,54,842	0/0:27,0:13:27.13:0,27,511	0/0:25,0:25:69.16:0,69,1003	0/0:35,0:35:32.68:0,33,440	0/0:30,0:29:29.37:0,29,397	1/1:9,25:33:76.05:1148,76,0	0/0:33,0:33:36.73:0,37,344	0/0:28,0:28:72.11:0,72,707	0/0:18,0:18:8.97:0,9,136	0/0:25,0:25:31.18:0,31,324	0/0:22,0:22:57.64:0,58,888	0/0:31,0:31:43.92:0,44,585	0/0:23,0:23:26.30:0,26,373	0/0:22,0:22:31.49:0,31,399	0/0:26,0:26:47.09:0,47,596	0/0:18,0:18:50.72:0,51,652	0/0:24,0:24:64.32:0,64,763	0/0:23,0:22:18:0,18,260	0/0:32,0:32:53.12:0,53,698	0/0:22,0:22:18.03:0,18,253	0/0:18,0:17:42.12:0,42,610	0/0:30,0:30:51.55:0,52,723	0/0:30,0:30:29.11:0,29,339	0/0:31,0:30:76.48:0,76,874	0/0:27,0:25:32.98:0,33,439	0/0:7,0:7:18.03:0,18,233
chr10	65017803	.	CAAA	C	7740.12	PASS	AB=0.579;AC=43;AF=0.768;AN=56;BaseQRankSum=-5.398;DP=511;FS=0.000;HRun=15;HaplotypeScore=91.2566;InbreedingCoeff=0.8662;MQ=72.41;MQ0=1;MQRankSum=-3.205;QD=19.02;ReadPosRankSum=3.825;VQSLOD=4.1194;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,23:35:56.90:623,57,0	1/1:0,9:9:21.02:236,21,0	0/0:13,0:10:8.93:0,9,68	0/0:20,0:18:18.01:0,18,261	0/0:9,0:20:38.33:0,38,325	1/1:2,14:16:33.02:370,33,0	1/1:5,11:15:33.06:370,33,0	1/1:17,0:36:36.82:155,37,0	1/1:11,9:20:20.87:235,21,0	1/1:3,13:16:35.94:393,36,0	1/1:3,11:14:26.93:303,27,0	1/1:4,8:12:20.99:235,21,0	0/0:4,0:10:23.93:0,24,189	1/1:3,16:19:39.02:437,39,0	1/1:1,16:19:40.18:452,40,0	1/1:2,14:17:25.50:300,26,0	1/1:2,20:25:59.87:625,60,0	1/1:2,10:12:26.99:303,27,0	1/1:9,8:18:8.88:234,9,0	1/1:6,14:21:28.31:333,28,0	1/1:5,19:24:48.01:538,48,0	1/1:0,10:10:23.98:269,24,0	0/0:10,0:22:36.66:0,37,335	0/0:3,0:18:41.87:0,42,340	0/1:6,14:22:15.44:346,0,15	1/1:6,11:18:29.99:365,30,0	1/1:5,16:22:44.66:487,45,0	1/1:0,5:6:10.52:132,11,0
chr10	65018316	.	A	AGCT	2115.08	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-6.794;DP=676;FS=0.000;HRun=0;HaplotypeScore=103.7698;InbreedingCoeff=0.9989;MQ=85.37;MQ0=0;MQRankSum=-3.094;QD=55.66;ReadPosRankSum=-4.721;VQSLOD=4.0317;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,144,2257	0/0:10,0:10:27.09:0,27,460	0/0:24,0:24:69.22:0,69,1116	0/0:21,0:22:54.94:0,55,789	0/0:17,0:17:45.05:0,45,715	0/0:24,0:24:66.18:0,66,1043	0/0:18,0:18:46.04:0,46,765	1/1:8,29:38:99:2210,111,0	0/0:22,0:22:66.21:0,66,1099	0/0:22,0:22:63.17:0,63,998	0/0:18,0:18:51.13:0,51,791	0/0:26,0:26:72.23:0,72,1200	0/0:23,0:23:69.24:0,69,1173	0/0:21,0:21:63.22:0,63,1074	0/0:33,0:33:99:0,99,1658	0/0:24,0:24:69.21:0,69,1125	0/0:31,0:31:93.32:0,93,1580	0/0:19,0:19:48.16:0,48,811	0/0:23,0:23:66.15:0,66,1018	0/0:20,0:20:57.16:0,57,895	0/0:38,0:38:99:0,102,1555	0/0:23,0:23:66.18:0,66,1024	0/0:20,0:20:57.13:0,57,837	0/0:25,0:25:72.22:0,72,1200	0/0:18,0:18:54.14:0,54,815	0/0:24,0:24:66.20:0,66,1033	0/0:31,0:31:93.30:0,93,1553	0/0:13,0:13:39.13:0,39,665
chr10	65018559	.	G	GC	1053.08	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-7.371;DP=649;FS=1.582;HRun=1;HaplotypeScore=57.8462;InbreedingCoeff=0.9979;MQ=86.49;MQ0=0;MQRankSum=0.076;QD=37.61;ReadPosRankSum=-3.770;VQSLOD=2.5328;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,132,1712	0/0:10,0:10:30.10:0,30,389	0/0:24,0:24:66.15:0,66,822	0/0:19,0:19:48.14:0,48,598	0/0:23,0:23:69.22:0,69,896	0/0:18,0:18:54.18:0,54,700	0/0:28,0:28:84.26:0,84,1076	1/1:1,27:28:78.25:1148,78,0	0/0:20,0:20:60.20:0,60,779	0/0:21,0:21:63.20:0,63,818	0/0:21,0:21:63.20:0,63,818	0/0:26,0:26:75.24:0,75,974	0/0:24,0:24:72.22:0,72,920	0/0:37,0:37:99:0,108,1388	0/0:23,0:23:66.20:0,66,843	0/0:35,0:35:99:0,102,1325	0/0:18,0:18:51.17:0,51,662	0/0:19,0:19:57.16:0,57,723	0/0:15,0:15:45.15:0,45,584	0/0:26,0:26:78.25:0,78,1013	0/0:26,0:26:75.24:0,75,974	0/0:20,0:20:54.16:0,54,686	0/0:21,0:21:60.18:0,60,765	0/0:21,0:21:57.19:0,57,739	0/0:10,0:10:30.10:0,30,389	0/0:26,0:26:75.24:0,75,974	0/0:36,0:36:99:0,108,1386	0/0:9,0:9:27.06:0,27,334
chr10	65019892	.	GTT	G	597.10	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.077;DP=493;FS=7.791;HRun=8;HaplotypeScore=58.1322;InbreedingCoeff=0.8114;MQ=69.75;MQ0=0;MQRankSum=-3.372;QD=22.97;ReadPosRankSum=-2.228;VQSLOD=1.6943;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:63.22:0,63,1065	0/0:4,0:4:6.02:0,6,101	0/0:15,0:15:33.03:0,33,529	0/0:8,0:7:21.07:0,21,316	0/0:34,0:34:90.31:0,90,1518	0/0:22,0:22:63.22:0,63,1066	0/0:8,0:8:21.07:0,21,355	1/1:6,20:26:60.12:692,60,0	0/0:16,0:16:42.14:0,42,705	0/0:26,0:26:69.24:0,69,1159	0/0:17,0:17:51.17:0,51,861	0/0:18,0:18:51.15:0,51,811	0/0:16,0:16:45.15:0,45,758	0/0:14,0:14:39.12:0,39,636	0/0:27,0:27:75.26:0,75,1266	0/0:21,0:21:60.19:0,60,977	0/0:29,0:29:84.27:0,84,1354	0/0:16,0:16:45.15:0,45,757	0/0:17,0:17:45.14:0,45,736	0/0:18,0:18:51.17:0,51,861	0/0:11,0:11:30.10:0,30,504	0/0:3,0:3:9.03:0,9,152	0/0:20,0:20:48.12:0,48,764	0/0:12,0:12:33.11:0,33,545	0/0:19,0:19:48.16:0,48,809	0/0:19,0:19:54.17:0,54,889	0/0:29,0:29:84.29:0,84,1420	0/0:3,0:3:9.03:0,9,145
chr10	65020356	.	TAAATA	T	1052.86	PASS	AC=2;AF=0.042;AN=48;BaseQRankSum=5.649;DP=198;FS=7.909;HRun=0;HaplotypeScore=40.2535;InbreedingCoeff=0.3434;MQ=71.46;MQ0=7;MQRankSum=-4.929;QD=38.99;ReadPosRankSum=-2.792;VQSLOD=1.6592;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:8:18.02:0,18,366	0/0:4,0:4:9.03:0,9,268	0/0:7,0:5:6:0,6,64	0/0:29,0:13:8.14:0,8,283	0/0:5,0:5:15.05:0,15,420	0/0:6,0:6:15.05:0,15,435	0/0:3,0:3:9.03:0,9,265	1/1:6,21:27:63.19:1145,63,0	./.	0/0:5,0:5:12.04:0,12,346	0/0:6,0:6:15.05:0,15,445	0/0:4,0:4:12.04:0,12,356	0/0:1,0:1:3.01:0,3,88	./.	0/0:1,0:1:3.01:0,3,90	0/0:3,0:3:3.01:0,3,89	0/0:19,0:19:48.16:0,48,1414	0/0:12,0:12:30.10:0,30,889	0/0:12,0:12:33.11:0,33,962	0/0:4,0:4:6.02:0,6,176	./.	0/0:1,0:1:3.01:0,3,90	./.	0/0:2,0:2:3.01:0,3,90	0/0:5,0:5:9.03:0,9,249	0/0:7,0:7:12.04:0,12,322	0/0:6,0:6:12.04:0,12,355	0/0:14,0:14:39.13:0,39,1150
chr10	65020583	.	T	TA	7732.72	PASS	AB=0.568;AC=39;AF=0.696;AN=56;BaseQRankSum=-11.351;DP=491;FS=6.139;HRun=9;HaplotypeScore=50.2002;InbreedingCoeff=0.8457;MQ=75.66;MQ0=1;MQRankSum=-1.158;QD=24.16;ReadPosRankSum=-1.088;VQSLOD=5.2322;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,123,1063	1/1:0,3:3:9.02:100,9,0	0/0:13,0:12:5.61:0,6,153	0/0:19,0:17:19.67:0,20,206	0/0:16,0:16:47.94:0,48,407	1/1:1,10:12:6.87:287,7,0	0/1:5,16:21:30.02:383,0,30	1/1:10,21:31:40.12:660,40,0	0/0:18,0:18:50.95:0,51,433	1/1:3,8:11:24.06:266,24,0	1/1:1,8:9:23.98:249,24,0	1/1:1,17:18:45.12:498,45,0	0/0:23,0:23:62.97:0,63,543	1/1:1,9:10:4.03:273,4,0	1/1:0,12:12:30.08:332,30,0	1/1:2,9:11:21.06:232,21,0	1/1:4,34:38:70.21:1003,70,0	1/1:4,17:21:39.58:432,40,0	1/1:5,22:25:66.13:703,66,0	1/1:2,12:14:33.09:362,33,0	1/1:2,8:11:26.97:281,27,0	1/1:3,7:10:20.97:216,21,0	0/0:14,0:14:35.98:0,36,310	0/0:22,0:22:53.94:0,54,464	1/1:1,8:9:21.06:232,21,0	1/1:3,11:14:33.07:355,33,0	1/1:2,19:21:44.77:464,45,0	1/1:1,16:17:16.06:405,16,0
chr10	65021926	.	C	CTTT	4840.25	PASS	AB=0.860;AC=40;AF=0.714;AN=56;BaseQRankSum=-0.581;DP=612;FS=0.000;HRun=17;HaplotypeScore=124.9659;InbreedingCoeff=0.4329;MQ=68.62;MQ0=3;MQRankSum=-4.114;QD=9.92;ReadPosRankSum=-4.748;VQSLOD=0.0616;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:20,0:27:63.94:64,0,157	1/1:11,5:14:12.04:157,12,0	0/1:21,0:11:15.30:15,0,36	0/0:16,0:14:7.19:0,7,46	0/0:23,0:25:20.96:0,21,201	1/1:8,6:18:6.02:82,6,0	0/1:13,0:19:0.48:84,0,0	0/0:22,0:28:12.12:0,12,78	0/0:19,0:22:13.03:0,13,127	1/1:17,0:34:50.05:577,50,0	1/1:20,0:20:35.04:402,35,0	1/1:18,0:18:25.56:288,26,0	0/1:12,0:14:7.40:7,0,73	1/1:7,4:14:6.02:96,6,0	1/1:14,8:25:5.45:56,5,0	1/1:11,1:19:15.49:180,15,0	0/1:8,11:19:15.72:103,0,16	1/1:10,8:19:9.03:131,9,0	1/1:20,1:21:27.04:348,27,0	1/1:12,0:21:32.96:336,33,0	1/1:8,11:22:7.51:71,8,0	1/1:12,0:21:13.60:303,14,0	0/1:18,0:18:13.98:14,0,60	0/0:30,0:33:37.12:0,37,320	1/1:22,0:31:37.35:335,37,0	1/1:24,0:24:16.35:434,16,0	1/1:23,0:21:40.92:495,41,0	1/1:11,0:11:23.99:264,24,0
chr10	65022947	.	GGAGAGAGAGAGAGAGAGAGAGAGA	G	10574.58	PASS	AB=0.804;AC=38;AF=0.704;AN=54;BaseQRankSum=5.890;DP=570;FS=18.476;HRun=0;HaplotypeScore=227.4607;InbreedingCoeff=0.7066;MQ=54.82;MQ0=25;MQRankSum=-4.405;QD=26.44;ReadPosRankSum=2.143;VQSLOD=2.5101;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:26:23.08:0,23,850	1/1:2,7:9:9.03:569,9,0	0/1:20,0:7:0:0,0,0	0/0:29,0:11:3:0,3,29	0/0:15,0:15:27.09:0,27,1451	1/1:5,13:17:12.04:758,12,0	1/1:17,0:15:26.17:267,26,0	./.	0/0:20,0:21:12.50:0,13,401	1/1:7,17:23:31.34:451,31,0	1/1:8,12:19:9.03:408,9,0	1/1:10,20:29:9.16:569,9,0	0/0:14,0:14:12.91:0,13,734	1/1:2,21:22:3.01:189,3,0	1/1:9,22:30:19.62:1141,20,0	1/1:5,16:20:12.04:758,12,0	1/1:7,13:18:12.04:758,12,0	0/1:4,9:14:99:184,0,182	1/1:13,0:11:4.56:44,5,0	1/1:13,0:8:6.02:80,6,0	1/1:18,0:14:18:205,18,0	1/1:11,14:22:15.05:798,15,0	0/0:17,0:17:18.06:0,18,757	0/0:13,0:22:18.06:0,18,1286	1/1:4,14:18:15.05:947,15,0	1/1:7,22:29:41.71:1304,42,0	1/1:14,16:29:14.12:766,14,0	1/1:3,4:6:6.02:379,6,0
chr10	65025428	.	A	AG	1071.04	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-1.175;DP=754;FS=7.542;HRun=2;HaplotypeScore=110.3773;InbreedingCoeff=0.9938;MQ=80.78;MQ0=0;MQRankSum=-2.164;QD=34.55;ReadPosRankSum=-4.113;VQSLOD=1.4865;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,108,1303	0/0:12,0:12:36.11:0,36,446	0/0:25,0:25:67.40:0,67,782	0/0:30,0:29:71.17:0,71,891	0/0:20,0:20:51.14:0,51,618	0/0:27,0:27:78.23:0,78,954	0/0:35,0:35:96.29:0,96,1177	1/1:4,27:31:81.27:1166,81,0	0/0:35,0:35:99:0,102,1250	0/0:27,0:27:75.23:0,75,921	0/0:18,0:18:51.16:0,51,632	0/0:37,0:37:99:0,102,1264	0/0:32,0:32:96.30:0,96,1189	0/0:30,0:30:81.25:0,81,1003	0/0:31,0:31:87.27:0,87,1078	0/0:17,0:17:45.13:0,45,546	0/0:40,0:40:99:0,117,1437	0/0:25,0:25:66.21:0,66,817	0/0:25,0:25:72.20:0,72,866	0/0:11,0:11:27.08:0,27,324	0/0:65,0:65:99:0,193,2360	0/0:12,0:12:27.08:0,27,335	0/0:10,0:10:21.07:0,21,260	0/0:38,0:38:99:0,111,1374	0/0:13,0:13:39.10:0,39,469	0/0:24,0:24:69.22:0,69,855	0/0:25,0:25:75.22:0,75,916	0/0:20,0:20:60.19:0,60,743
chr10	65026302	.	T	TCTTG	2418.21	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.881;DP=658;FS=0.000;HRun=0;HaplotypeScore=105.2400;InbreedingCoeff=0.9977;MQ=92.04;MQ0=0;MQRankSum=-8.133;QD=62.01;ReadPosRankSum=-4.254;VQSLOD=4.2030;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,117,2181	0/0:11,0:11:33.11:0,33,605	0/0:27,0:27:66.05:0,66,1009	0/0:32,0:32:80.96:0,81,1301	0/0:20,0:20:57.19:0,57,1024	0/0:24,0:24:72.25:0,72,1344	0/0:25,0:25:69.22:0,69,1255	1/1:11,26:39:99:2513,102,0	0/0:21,0:21:60.21:0,60,1120	0/0:25,0:25:69.24:0,69,1288	0/0:15,0:15:42.14:0,42,783	0/0:19,0:19:57.20:0,57,1042	0/0:23,0:23:66.23:0,66,1232	0/0:19,0:19:57.20:0,57,1054	0/0:20,0:20:54.19:0,54,1008	0/0:15,0:15:45.15:0,45,829	0/0:34,0:34:99:0,99,1836	0/0:26,0:26:63.19:0,63,1131	0/0:20,0:20:54.19:0,54,1007	0/0:23,0:23:66.11:0,66,1030	0/0:34,0:34:90.29:0,90,1648	0/0:20,0:20:54.17:0,54,976	0/0:20,0:20:48.16:0,48,896	0/0:30,0:30:81.24:0,81,1436	0/0:20,0:19:57.18:0,57,1007	0/0:21,0:21:60.20:0,60,1081	0/0:27,0:26:75.26:0,75,1389	0/0:8,0:8:24.08:0,24,448
chr10	65026477	.	G	GA	811.24	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-6.402;DP=552;FS=7.336;HRun=9;HaplotypeScore=56.1751;InbreedingCoeff=0.8847;MQ=85.42;MQ0=1;MQRankSum=-0.114;QD=23.18;ReadPosRankSum=-3.465;VQSLOD=3.0345;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:80.96:0,81,703	0/0:14,0:14:38.99:0,39,339	0/0:23,0:23:36.97:0,37,263	0/0:23,0:19:6.94:0,7,149	0/0:30,0:29:68.94:0,69,596	0/0:29,0:29:62.96:0,63,543	0/0:21,0:21:59.99:0,60,521	1/1:8,27:35:84.18:906,84,0	0/0:13,0:13:38.99:0,39,339	0/0:22,0:22:56.98:0,57,493	0/0:22,0:22:62.99:0,63,547	0/0:7,0:7:15:0,15,130	0/0:14,0:14:35.96:0,36,308	0/0:13,0:13:26.98:0,27,234	0/0:17,0:17:47.98:0,48,417	0/0:10,0:10:29.99:0,30,260	0/0:24,0:24:59.95:0,60,516	0/0:14,0:14:35.97:0,36,308	0/0:21,0:22:53:0,53,444	0/0:26,0:26:65.95:0,66,569	0/0:18,0:20:46.04:0,46,377	0/0:26,0:26:65.97:0,66,573	0/0:7,0:7:21:0,21,182	0/0:20,0:20:44.93:0,45,386	0/0:20,0:20:53.99:0,54,469	0/0:28,0:28:71.98:0,72,625	0/0:16,0:16:41.99:0,42,365	0/0:4,0:5:14.03:0,14,110
chr10	65028082	.	GCT	G	1139.36	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.977;DP=756;FS=12.619;HRun=0;HaplotypeScore=88.9589;InbreedingCoeff=0.9698;MQ=93.18;MQ0=0;MQRankSum=-2.855;QD=39.29;ReadPosRankSum=-4.351;VQSLOD=3.6325;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,156,2847	0/0:10,0:10:30.10:0,30,561	0/0:35,0:35:99:0,105,1936	0/0:31,0:31:76.08:0,76,1510	0/0:23,0:23:66.23:0,66,1236	0/0:18,0:18:54.19:0,54,1004	0/0:36,0:36:99:0,108,1992	1/1:1,28:29:84.28:1234,84,0	0/0:27,0:27:81.25:0,81,1448	0/0:27,0:27:81.27:0,81,1485	0/0:17,0:17:48.15:0,48,859	0/0:33,0:33:96.33:0,96,1775	0/0:24,0:24:72.25:0,72,1348	0/0:33,0:33:96.32:0,96,1760	0/0:29,0:29:87.30:0,87,1622	0/0:24,0:24:72.23:0,72,1303	0/0:43,0:43:99:0,129,2416	0/0:22,0:22:66.20:0,66,1202	0/0:17,0:17:45.15:0,45,842	0/0:19,0:19:57.18:0,57,1035	0/0:47,0:47:99:0,135,2444	0/0:30,0:30:90.29:0,90,1637	0/0:17,0:17:48.16:0,48,898	0/0:41,0:41:99:0,123,2295	0/0:22,0:22:63.22:0,63,1180	0/0:17,0:17:51.17:0,51,953	0/0:28,0:28:81.26:0,81,1478	0/0:4,0:4:12.04:0,12,225
chr10	65028287	.	G	GT	732.22	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.073;DP=708;FS=1.867;HRun=0;HaplotypeScore=78.0479;InbreedingCoeff=0.9919;MQ=86.31;MQ0=0;MQRankSum=-5.996;QD=38.54;ReadPosRankSum=-2.985;VQSLOD=2.7914;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,141,1968	0/0:6,0:6:18.06:0,18,251	0/0:19,0:19:53.79:0,54,667	0/0:28,0:28:72.23:0,72,974	0/0:21,0:21:57.17:0,57,765	0/0:14,0:14:42.13:0,42,570	0/0:26,0:26:78.25:0,78,1073	1/1:0,19:19:57.18:827,57,0	0/0:33,0:33:99:0,99,1349	0/0:22,0:22:60.20:0,60,838	0/0:20,0:20:57.10:0,57,766	0/0:32,0:32:96.32:0,96,1342	0/0:20,0:20:60.18:0,60,817	0/0:25,0:25:72.24:0,72,996	0/0:34,0:34:99:0,102,1425	0/0:18,0:18:54.17:0,54,738	0/0:35,0:35:99:0,99,1325	0/0:30,0:30:84.28:0,84,1173	0/0:28,0:28:78.24:0,78,1071	0/0:23,0:23:63.20:0,63,860	0/0:40,0:40:99:0,117,1617	0/0:21,0:21:57.17:0,57,775	0/0:23,0:23:54.18:0,54,755	0/0:24,0:24:72.22:0,72,987	0/0:30,0:30:90.28:0,90,1239	0/0:27,0:27:77.93:0,78,1057	0/0:30,0:29:90.28:0,90,1240	0/0:12,0:12:36.12:0,36,503
chr10	65029437	.	CA	C	14726.75	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=9.558;DP=688;FS=0.391;HRun=7;HaplotypeScore=102.1613;InbreedingCoeff=0.9974;MQ=77.88;MQ0=0;MQRankSum=-2.498;QD=25.93;ReadPosRankSum=0.760;VQSLOD=4.7182;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,42:45:99:1255,123,0	1/1:2,16:18:42.09:429,42,0	0/0:20,0:21:41.68:0,42,463	0/0:10,0:10:21.06:0,21,243	0/0:20,0:20:60.19:0,60,755	1/1:1,28:29:81.18:826,81,0	1/1:4,29:33:84.19:857,84,0	1/1:8,24:32:69.12:690,69,0	1/1:0,21:21:54.12:551,54,0	1/1:6,37:43:99:1132,111,0	1/1:2,21:23:60.13:612,60,0	1/1:2,26:28:72.16:735,72,0	0/0:19,0:19:54.17:0,54,679	1/1:7,19:26:54.12:551,54,0	1/1:3,20:23:54.12:551,54,0	1/1:2,29:31:81.18:827,81,0	1/1:2,31:33:84.19:857,84,0	1/1:3,16:19:48.11:490,48,0	1/1:3,19:22:57.13:581,57,0	1/1:1,26:27:75.13:754,75,0	1/1:3,25:28:66.15:673,66,0	1/1:2,25:27:66.14:673,66,0	0/0:23,0:23:63.19:0,63,781	0/0:27,0:27:75.23:0,75,930	1/1:1,11:12:30.07:306,30,0	1/1:1,18:19:54.12:551,54,0	1/1:2,21:23:63.14:643,63,0	1/1:0,6:6:18.04:184,18,0
chr10	65029968	.	GGTGTGTGTGTGT	G	640.35	PASS	AC=4;AF=0.074;AN=54;BaseQRankSum=4.140;DP=790;FS=9.923;HRun=0;HaplotypeScore=282.5505;InbreedingCoeff=0.7348;MQ=53.17;MQ0=16;MQRankSum=-5.036;QD=8.32;ReadPosRankSum=-3.793;VQSLOD=0.6245;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:34,17:50:14.14:340,14,0	0/0:6,0:6:6.02:0,6,259	./.	0/0:41,0:23:0.47:0,0,1	0/0:19,0:19:30.10:0,30,1296	0/0:26,0:26:15.51:0,16,359	0/0:33,0:32:20.97:0,21,893	0/0:29,0:29:36.11:0,36,858	1/1:17,9:26:11.58:410,12,0	0/0:24,0:23:27.09:0,27,962	0/0:19,0:19:15.99:0,16,514	0/0:34,0:34:21.53:0,22,871	0/0:18,0:19:27.09:0,27,1176	0/0:27,0:27:27.05:0,27,840	0/0:32,0:31:12.04:0,12,328	0/0:36,0:36:33.56:0,34,950	0/0:25,0:25:35.32:0,35,1176	0/0:21,0:21:24.08:0,24,774	0/0:25,0:25:24.55:0,25,1111	0/0:20,0:20:4.89:0,5,323	0/0:55,0:53:47.29:0,47,1240	0/0:30,0:30:11.99:0,12,558	0/0:13,0:14:36.12:0,36,1645	0/0:42,0:43:69.35:0,69,3357	0/0:28,0:28:9.50:0,10,333	0/0:25,0:25:51.17:0,51,2055	0/0:30,0:30:48.62:0,49,1514	0/0:9,0:7:6.02:0,6,187
chr10	65030013	.	G	GTGTGTGTGTGTA	11560.42	PASS	AB=0.813;AC=38;AF=0.679;AN=56;BaseQRankSum=-0.881;DP=714;FS=4.466;HRun=0;HaplotypeScore=245.0610;InbreedingCoeff=0.7921;MQ=64.09;MQ0=8;MQRankSum=-1.827;QD=24.44;ReadPosRankSum=0.157;VQSLOD=3.9065;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:47:44.71:0,45,437	1/1:2,1:4:3.01:180,3,0	0/0:36,0:23:58.94:0,59,580	0/0:35,0:18:50.96:0,51,487	0/0:20,0:20:50.80:0,51,820	1/1:17,0:17:28.34:368,28,0	1/1:36,0:35:65.39:669,65,0	0/1:31,0:30:72.73:73,0,464	0/0:21,0:21:14.88:0,15,441	1/1:23,0:23:68.79:1026,69,0	1/1:18,0:18:30.30:336,30,0	1/1:32,0:32:54.42:689,54,0	0/0:20,0:20:59.94:0,60,748	1/1:4,17:24:5.59:294,6,0	1/1:7,15:28:3:131,3,0	1/1:28,0:28:50.99:1069,51,0	1/1:27,1:28:54.48:1205,54,0	1/1:17,0:17:41.81:564,42,0	1/1:21,0:21:60.03:1012,60,0	0/1:8,0:20:0.21:0,0,0	1/1:44,0:40:66.40:911,66,0	1/1:17,0:17:17.92:236,18,0	0/0:21,0:21:59.57:0,60,989	0/0:40,0:40:89.15:0,89,1563	1/1:8,9:25:0.47:2,0,0	1/1:8,10:24:49.78:967,50,0	1/1:28,0:29:71.07:1575,71,0	1/1:6,0:5:14.96:253,15,0
chr10	65032840	.	GT	G	376.59	PASS	AB=0.969;AC=4;AF=0.071;AN=56;BaseQRankSum=-2.673;DP=613;FS=0.685;HRun=13;HaplotypeScore=98.0035;InbreedingCoeff=0.4296;MQ=76.15;MQ0=4;MQRankSum=1.310;QD=3.45;ReadPosRankSum=-0.458;VQSLOD=0.9391;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:41:95.87:0,96,888	0/0:2,0:7:14.47:0,14,85	0/1:46,0:25:3.82:4,0,72	0/0:23,0:8:5.99:0,6,50	0/1:28,2:30:5.05:5,0,420	0/0:4,0:14:31.43:0,31,168	0/0:8,0:26:46.34:0,46,258	1/1:9,22:32:67.55:469,68,0	0/0:11,1:15:16.90:0,17,291	0/0:9,0:25:42.40:0,42,228	0/0:8,0:24:52.11:0,52,300	0/0:6,0:17:19.79:0,20,98	0/0:11,1:13:13.97:0,14,278	0/0:4,0:16:19.99:0,20,104	0/0:7,0:22:31.79:0,32,190	0/0:2,1:20:6.68:0,7,117	0/0:5,0:32:37.02:0,37,192	0/0:9,0:17:43:0,43,230	0/0:12,0:30:60.33:0,60,325	0/0:8,0:24:48.66:0,49,276	0/0:2,0:5:5.78:0,6,32	0/0:5,0:12:24.33:0,24,136	0/0:14,0:15:38.84:0,39,348	0/0:11,1:12:13.95:0,14,234	0/0:3,0:22:45.64:0,46,245	0/0:7,0:31:64.35:0,64,334	0/0:12,0:32:43.13:0,43,246	0/0:1,0:9:17.19:0,17,94
chr10	65032855	.	AT	A	394.17	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-1.321;DP=583;FS=0.000;HRun=9;HaplotypeScore=82.6034;InbreedingCoeff=0.7137;MQ=67.02;MQ0=5;MQRankSum=-0.522;QD=11.26;ReadPosRankSum=-2.314;VQSLOD=2.5164;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,120,1311	0/0:8,0:8:11.97:0,12,139	0/0:41,0:16:7.67:0,8,137	0/0:21,2:5:1.71:0,2,35	0/0:27,0:27:65.94:0,66,709	0/0:16,0:16:45.06:0,45,478	0/0:23,0:23:51.01:0,51,542	1/1:27,8:35:53.98:489,54,0	0/0:16,0:16:33.06:0,33,350	0/0:18,0:18:34.28:0,34,357	0/0:18,0:18:39.95:0,40,428	0/0:17,0:17:33.04:0,33,364	0/0:16,0:16:41.99:0,42,424	0/0:13,0:13:24.06:0,24,263	0/0:21,0:21:33.04:0,33,347	0/0:22,0:22:39.03:0,39,406	0/0:31,0:31:48.10:0,48,528	0/0:13,1:14:17.54:0,18,371	0/0:20,0:20:45.53:0,46,477	0/0:19,0:20:38.91:0,39,389	0/0:7,0:7:9.03:0,9,104	0/0:10,0:10:24.07:0,24,274	0/0:19,0:19:51.14:0,51,580	0/0:14,0:14:36.04:0,36,386	0/0:19,0:19:38.98:0,39,404	0/0:28,0:28:62.44:0,62,680	0/0:28,0:28:45.08:0,45,485	0/0:14,0:14:33.05:0,33,351
chr10	65032914	.	C	CG	1173.56	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-8.283;DP=577;FS=15.330;HRun=0;HaplotypeScore=61.5366;InbreedingCoeff=0.9826;MQ=78.98;MQ0=0;MQRankSum=-1.808;QD=43.47;ReadPosRankSum=-4.707;VQSLOD=0.8099;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,135,1863	0/0:5,0:5:15.04:0,15,197	0/0:13,0:13:35.26:0,35,483	0/0:21,0:20:57.15:0,57,764	0/0:21,0:21:63.21:0,63,879	0/0:16,0:16:42.14:0,42,587	0/0:23,0:23:66.22:0,66,922	1/1:0,27:27:81.27:1268,81,0	0/0:16,0:16:45.15:0,45,629	0/0:18,0:18:51.17:0,51,713	0/0:14,0:14:30.10:0,30,419	0/0:16,0:16:45.12:0,45,594	0/0:19,0:19:57.19:0,57,796	0/0:13,0:13:27.03:0,27,359	0/0:30,0:30:72.16:0,72,949	0/0:27,0:27:75.23:0,75,1032	0/0:29,0:28:75.24:0,75,1031	0/0:14,0:14:39.11:0,39,523	0/0:17,0:17:51.17:0,51,713	0/0:20,0:20:60.18:0,60,806	0/0:30,0:30:84.21:0,84,1088	0/0:13,0:13:35.79:0,36,472	0/0:19,0:19:57.15:0,57,775	0/0:22,0:22:66.22:0,66,923	0/0:23,0:23:69.20:0,69,929	0/0:22,0:22:66.21:0,66,906	0/0:23,0:23:60.17:0,60,803	0/0:21,0:21:60.18:0,60,821
chr10	65033316	.	G	GGC	774.07	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-7.219;DP=592;FS=6.373;HRun=0;HaplotypeScore=80.0640;InbreedingCoeff=0.8440;MQ=82.99;MQ0=0;MQRankSum=-0.758;QD=43.00;ReadPosRankSum=-1.956;VQSLOD=4.1180;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,156,2164	0/0:10,0:10:29.45:0,29,347	0/0:20,0:19:48.12:0,48,625	0/0:18,0:18:39.89:0,40,500	0/0:18,0:18:48.43:0,48,629	0/0:27,0:27:76.74:0,77,1047	0/0:25,0:25:69.21:0,69,998	1/1:0,18:18:54.16:869,54,0	0/0:24,0:24:63.17:0,63,890	0/0:19,0:19:54.01:0,54,686	0/0:9,0:9:21.05:0,21,294	0/0:22,0:22:65.99:0,66,875	0/0:20,0:20:54.16:0,54,775	0/0:21,0:21:54.14:0,54,731	0/0:14,0:14:39.11:0,39,568	0/0:16,0:16:45.12:0,45,620	0/0:28,0:28:81.24:0,81,1163	0/0:32,0:32:96.29:0,96,1391	0/0:13,0:13:34.33:0,34,461	0/0:8,0:8:21.06:0,21,298	0/0:53,0:53:99:0,153,1994	0/0:17,0:17:38.97:0,39,546	0/0:12,0:12:33.07:0,33,456	0/0:36,0:36:99:0,108,1461	0/0:19,0:19:48.10:0,48,624	0/0:19,0:19:48.06:0,48,565	0/0:19,0:19:54.17:0,54,794	0/0:1,0:1:3.01:0,3,45
chr10	65035216	.	CGCGTGTGTGT	C	9488.93	PASS	AB=0.676;AC=41;AF=0.732;AN=56;BaseQRankSum=9.607;DP=473;FS=3.923;HRun=0;HaplotypeScore=138.9354;InbreedingCoeff=0.5768;MQ=59.03;MQ0=8;MQRankSum=-8.009;QD=27.27;ReadPosRankSum=2.113;VQSLOD=3.7522;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,0:27:3.01:80,3,0	1/1:1,4:5:3.01:101,3,0	0/0:36,0:16:41.87:0,42,426	0/0:23,0:10:19.09:0,19,296	0/0:16,0:16:39.09:0,39,1362	1/1:0,16:16:18.06:570,18,0	0/1:1,17:19:18.50:67,0,19	0/1:20,0:19:99:186,0,308	1/1:0,0:9:15.05:398,15,0	1/1:1,10:11:26.97:446,27,0	1/1:0,5:5:3.01:100,3,0	1/1:1,20:21:29.58:964,30,0	0/0:15,0:15:45.10:0,45,1713	1/1:0,14:15:21.07:657,21,0	1/1:0,25:26:30:901,30,0	1/1:2,21:23:27.09:907,27,0	1/1:1,17:17:6.02:177,6,0	1/1:0,13:13:9.03:300,9,0	1/1:0,10:10:29.99:481,30,0	1/1:1,7:8:3.01:101,3,0	0/1:2,35:37:11.96:12,0,91	1/1:0,9:9:3.01:100,3,0	0/0:12,0:12:33.05:0,33,1272	0/0:23,0:23:63.15:0,63,2741	1/1:0,17:17:18.06:604,18,0	1/1:0,17:17:51.04:1151,51,0	1/1:0,13:13:21.07:689,21,0	1/1:0,7:7:15.05:496,15,0
chr10	65035218	.	CGT	C	997.13	PASS	AB=0.916;AC=41;AF=0.759;AN=54;BaseQRankSum=9.821;DP=477;FS=11.875;HRun=0;HaplotypeScore=130.8544;InbreedingCoeff=0.4345;MQ=57.47;MQ0=8;MQRankSum=-7.988;QD=3.14;ReadPosRankSum=1.671;VQSLOD=2.1826;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:27:2.84:14,3,0	1/1:4,0:4:2.84:14,3,0	./.	0/0:24,0:11:2.94:0,3,18	0/1:13,2:15:9.59:10,0,262	1/1:16,0:16:14.20:70,14,0	1/1:19,0:19:3.37:17,3,0	0/0:22,0:21:15.27:0,15,153	1/1:9,0:9:14.20:70,14,0	1/1:11,0:11:8.56:43,9,0	1/1:5,0:5:2.84:14,3,0	1/1:22,0:21:25.66:119,26,0	0/0:14,0:15:15.94:0,16,374	1/1:15,0:15:7.70:72,8,0	1/1:26,0:26:25.57:126,26,0	1/1:22,0:22:25.57:126,26,0	1/1:19,0:18:2.84:14,3,0	1/1:13,0:13:8.36:39,8,0	1/1:10,0:10:8.52:42,9,0	1/1:9,0:8:2.82:14,3,0	0/0:37,0:37:2.99:0,3,23	1/1:9,0:9:2.84:14,3,0	0/1:11,2:13:6.56:7,0,291	0/0:24,1:25:23.50:0,23,723	1/1:17,0:17:17.04:84,17,0	0/1:17,0:17:8.38:93,0,8	1/1:13,0:13:19.89:98,20,0	1/1:7,0:7:13.40:62,13,0
chr10	65035249	.	G	GCGCA	1147.99	PASS	AB=0.607;AC=1;AF=0.018;AN=56;BaseQRankSum=-1.877;DP=545;FS=4.648;HRun=0;HaplotypeScore=179.9009;InbreedingCoeff=-0.0261;MQ=49.41;MQ0=10;MQRankSum=-1.889;QD=31.03;ReadPosRankSum=-3.234;VQSLOD=2.5945;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:27.09:0,27,519	0/0:6,0:6:6.02:0,6,104	0/0:33,0:15:41.90:0,42,806	0/0:32,0:17:48.16:0,48,946	0/0:16,0:16:39.12:0,39,716	0/0:18,0:18:27.09:0,27,448	0/0:27,0:27:23.16:0,23,435	0/1:13,22:36:99:1222,0,100	0/0:15,0:15:27.09:0,27,454	0/0:9,0:9:21.05:0,21,356	0/0:6,0:6:9.03:0,9,164	0/0:19,0:19:42.14:0,42,663	0/0:16,0:16:48.15:0,48,928	0/0:18,0:18:33.11:0,33,516	0/0:28,0:28:42.14:0,42,683	0/0:21,0:20:39.13:0,39,604	0/0:23,0:22:23.81:0,24,414	0/0:14,0:14:30.10:0,30,521	0/0:11,0:11:24.08:0,24,427	0/0:15,0:14:18.53:0,19,351	0/0:38,0:38:21.03:0,21,351	0/0:13,0:13:15.05:0,15,259	0/0:14,0:14:33.11:0,33,663	0/0:23,0:23:66.23:0,66,1338	0/0:18,0:18:30.10:0,30,486	0/0:18,0:18:49.63:0,50,692	0/0:18,0:18:42:0,42,666	0/0:7,0:7:15.05:0,15,220
chr10	65035800	.	GCCACA	G	1167.43	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.420;DP=758;FS=0.781;HRun=0;HaplotypeScore=135.6794;InbreedingCoeff=0.9990;MQ=81.38;MQ0=0;MQRankSum=-4.010;QD=37.66;ReadPosRankSum=-4.016;VQSLOD=2.8526;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,151,4501	0/0:10,0:10:30.10:0,30,910	0/0:23,0:23:48.13:0,48,1210	0/0:16,0:17:31.13:0,31,1098	0/0:26,0:26:72.23:0,72,2124	0/0:27,0:27:75.24:0,75,2196	0/0:36,0:36:96.33:0,96,2853	1/1:7,24:31:66.20:1262,66,0	0/0:25,0:25:75.22:0,75,2080	0/0:37,0:37:96.33:0,96,2904	0/0:19,0:19:57.20:0,57,1692	0/0:26,0:26:75.26:0,75,2241	0/0:24,0:24:66.23:0,66,1940	0/0:20,0:20:54.19:0,54,1601	0/0:42,0:42:99:0,120,3635	0/0:29,0:29:84.27:0,84,2449	0/0:35,0:35:99:0,102,2991	0/0:28,0:28:84.29:0,84,2466	0/0:23,0:23:54.15:0,54,1438	0/0:24,0:24:69.24:0,69,2056	0/0:40,0:40:99:0,114,3480	0/0:18,0:18:54.17:0,54,1581	0/0:17,0:17:51.18:0,51,1551	0/0:40,0:40:99:0,111,3264	0/0:22,0:22:66.23:0,66,1964	0/0:23,0:23:63.22:0,63,1883	0/0:28,0:28:81.28:0,81,2463	0/0:14,0:14:42.12:0,42,1213
chr10	65036117	.	CA	C	514.14	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.292;DP=602;FS=0.879;HRun=3;HaplotypeScore=63.0826;InbreedingCoeff=0.9975;MQ=65.72;MQ0=0;MQRankSum=-1.123;QD=28.56;ReadPosRankSum=-4.088;VQSLOD=1.8550;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,120,1688	0/0:12,0:12:36.11:0,36,499	0/0:22,0:21:50.61:0,51,565	0/0:18,1:16:26.86:0,27,403	0/0:28,0:28:81.27:0,81,1164	0/0:20,0:20:57.19:0,57,820	0/0:29,0:29:78.25:0,78,1105	1/1:1,17:18:51.14:609,51,0	0/0:24,0:24:66.21:0,66,933	0/0:24,0:24:69.21:0,69,960	0/0:18,0:18:54.17:0,54,760	0/0:12,0:12:33.11:0,33,475	0/0:24,0:24:66.21:0,66,934	0/0:15,0:15:45.15:0,45,648	0/0:18,0:18:54.18:0,54,777	0/0:19,0:19:51.17:0,51,734	0/0:26,0:26:75.25:0,75,1078	0/0:29,0:29:84.28:0,84,1205	0/0:19,0:19:57.16:0,57,784	0/0:22,0:22:66.20:0,66,916	0/0:24,0:24:72.23:0,72,1008	0/0:16,0:16:45.15:0,45,648	0/0:22,0:22:66.21:0,66,930	0/0:24,0:24:69.23:0,69,993	0/0:32,0:32:90.29:0,90,1277	0/0:19,0:19:51.16:0,51,717	0/0:17,0:16:51.17:0,51,732	0/0:9,0:9:27.09:0,27,388
chr10	65036240	.	G	GA	507.08	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-5.577;DP=625;FS=0.000;HRun=6;HaplotypeScore=61.4563;InbreedingCoeff=0.8393;MQ=80.11;MQ0=0;MQRankSum=0.488;QD=22.05;ReadPosRankSum=-3.451;VQSLOD=1.9972;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,105,1030	0/0:1,0:1:3.01:0,3,31	0/0:22,0:22:59.86:0,60,542	0/0:18,0:18:45.02:0,45,421	0/0:27,0:26:66.13:0,66,666	0/0:22,0:22:60.11:0,60,603	0/0:25,0:25:66.09:0,66,644	1/1:7,16:23:51.13:602,51,0	0/0:19,0:19:45.06:0,45,445	0/0:17,0:17:42.06:0,42,414	0/0:15,0:16:41.10:0,41,396	0/0:26,0:26:72.16:0,72,732	0/0:27,0:27:72.16:0,72,733	0/0:27,0:27:75.15:0,75,756	0/0:26,0:26:69.12:0,69,689	0/0:14,0:14:39.07:0,39,390	0/0:31,0:31:84.15:0,84,841	0/0:20,0:20:51.11:0,51,519	0/0:25,0:25:57.02:0,57,537	0/0:22,0:22:62.99:0,63,618	0/0:19,0:20:59.15:0,59,579	0/0:23,0:23:60.13:0,60,610	0/0:25,0:25:57.96:0,58,572	0/0:30,0:30:84.13:0,84,829	0/0:31,0:31:86.96:0,87,846	0/0:19,0:19:57.05:0,57,558	0/0:25,0:26:74.17:0,74,729	0/0:5,0:5:15.03:0,15,153
chr10	65037699	.	T	TCACACACACA	1797.60	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=6.486;DP=429;FS=29.269;HRun=0;HaplotypeScore=126.2150;InbreedingCoeff=-0.3434;MQ=42.76;MQ0=19;MQRankSum=-2.605;QD=7.37;ReadPosRankSum=-2.131;VQSLOD=-0.1217;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:18:2.73:7,3,0	0/1:9,0:9:99:243,0,195	0/0:9,0:4:6.01:0,6,63	0/0:12,0:4:9:0,9,124	0/1:27,0:27:11.08:11,0,1206	0/1:11,0:11:39.49:39,0,98	0/1:18,0:15:26.59:27,0,356	0/0:18,0:16:34.53:0,35,493	0/1:19,0:18:9.61:50,0,10	0/1:19,0:18:99:339,0,741	0/1:14,0:12:36.65:37,0,156	0/0:10,0:9:9.02:0,9,171	0/0:17,0:17:45.02:0,45,775	0/1:20,0:19:85.61:86,0,548	0/0:16,6:25:14.61:0,15,294	0/0:12,0:9:8.92:0,9,229	0/1:16,0:16:99:109,0,379	0/1:8,0:8:99:219,0,110	0/1:6,0:6:77.08:77,0,143	0/1:16,0:16:19.89:82,0,20	0/0:12,0:10:2.91:0,3,97	0/0:18,0:15:14.75:0,15,383	0/0:18,0:16:16.43:0,16,909	0/0:22,0:21:45.15:0,45,1287	0/0:11,0:9:9.03:0,9,239	0/1:15,0:13:99:254,0,635	0/1:15,0:14:77.68:78,0,277	0/1:10,0:8:87.70:295,0,88
chr10	65037701	.	T	TCACACACACACA	2638.58	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=3.977;DP=432;FS=15.576;HRun=0;HaplotypeScore=134.8181;InbreedingCoeff=-0.3002;MQ=42.75;MQ0=15;MQRankSum=-1.547;QD=11.09;ReadPosRankSum=-1.854;VQSLOD=1.4913;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:18:2.59:0,3,12	0/1:9,0:9:72.41:338,0,72	0/0:8,0:4:11.95:0,12,162	0/0:16,0:7:17.07:0,17,252	0/0:27,0:27:19.94:0,20,1059	0/1:11,0:11:26.50:63,0,26	0/1:17,0:15:81.28:81,0,153	0/0:17,0:15:28.17:0,28,299	1/1:20,0:19:1.85:47,2,0	0/1:18,0:17:99:424,0,359	0/1:13,0:11:59.84:85,0,60	0/1:10,0:9:18.44:18,0,66	0/0:17,0:17:44.23:0,44,540	0/1:20,0:19:99:171,0,225	0/0:24,0:24:14.13:0,14,139	0/0:11,0:8:8.93:0,9,125	0/1:16,0:16:99:114,0,134	0/1:7,0:7:29.95:261,0,30	0/1:7,0:7:68.26:96,0,68	1/1:7,9:17:2.96:106,3,0	0/1:12,0:10:14.98:15,0,41	0/1:19,0:16:25.52:26,0,164	0/0:17,0:15:17.98:0,18,956	0/0:24,0:23:47.77:0,48,1297	0/0:8,0:10:9:0,9,109	0/1:17,0:15:99:434,0,293	0/1:15,0:14:99:125,0,111	0/1:10,0:8:13.68:395,0,14
chr10	65037703	.	T	TCACACACACACACACA	6615.08	PASS	AB=1.000;AC=38;AF=0.731;AN=52;BaseQRankSum=-1.003;DP=496;FS=0.697;HRun=0;HaplotypeScore=180.0955;InbreedingCoeff=0.6884;MQ=41.32;MQ0=14;MQRankSum=-5.822;QD=19.17;ReadPosRankSum=-2.694;VQSLOD=3.5732;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	1/1:11,0:11:12.04:505,12,0	0/0:8,0:4:10.59:0,11,235	0/0:16,0:7:15.05:0,15,363	0/0:26,0:26:39.23:0,39,1161	1/1:13,0:13:6.02:240,6,0	1/1:23,0:21:21.44:434,21,0	0/0:12,0:16:12.40:0,12,181	1/1:22,0:21:9.50:198,9,0	1/1:24,0:22:26.58:1154,27,0	1/1:14,0:12:6.02:145,6,0	0/1:11,0:10:0:0,0,0	0/1:17,0:17:5.77:6,0,339	1/1:25,0:24:15.05:453,15,0	1/1:27,0:26:2.50:5,2,0	1/1:14,0:11:6.01:176,6,0	1/1:19,0:17:8.96:192,9,0	1/1:6,3:11:12.04:517,12,0	1/1:8,0:8:8.94:156,9,0	1/1:19,0:19:3.01:117,3,0	1/1:15,0:14:6.02:77,6,0	1/1:21,0:18:6.01:102,6,0	0/0:17,0:15:27.09:0,27,1053	0/0:24,0:23:39:0,39,1457	./.	1/1:22,0:20:30.08:986,30,0	1/1:16,0:15:9.03:310,9,0	1/1:13,0:11:24.08:843,24,0
chr10	65039577	.	G	GT	630.31	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.963;DP=526;FS=0.920;HRun=0;HaplotypeScore=55.7357;InbreedingCoeff=0.9809;MQ=87.72;MQ0=0;MQRankSum=-2.312;QD=35.02;ReadPosRankSum=-3.804;VQSLOD=2.1638;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,102,1351	0/0:12,0:12:36.09:0,36,469	0/0:17,0:17:48.05:0,48,644	0/0:20,0:20:56.64:0,57,741	0/0:16,0:16:42.07:0,42,500	0/0:18,0:18:54.14:0,54,703	0/0:13,0:13:39.12:0,39,529	1/1:0,18:18:54.15:725,54,0	0/0:15,0:15:42.14:0,42,587	0/0:17,0:16:51.16:0,51,684	0/0:8,0:8:24.04:0,24,286	0/0:21,0:21:57.16:0,57,763	0/0:18,0:18:54.10:0,54,713	0/0:15,0:15:42.14:0,42,587	0/0:25,0:25:75.24:0,75,1032	0/0:16,0:16:48.16:0,48,671	0/0:24,0:24:72.22:0,72,985	0/0:21,0:21:63.08:0,63,799	0/0:22,0:22:63.14:0,63,824	0/0:11,0:11:27.06:0,27,343	0/0:48,0:48:99:0,135,1805	0/0:19,0:19:51.10:0,51,626	0/0:12,0:12:36.04:0,36,432	0/0:25,0:25:75.25:0,75,1048	0/0:15,0:15:42.11:0,42,552	0/0:24,0:24:69.12:0,69,866	0/0:15,0:15:45.15:0,45,629	0/0:5,0:5:15.01:0,15,172
chr10	65040074	.	C	CTT	1779.38	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-8.367;DP=723;FS=9.414;HRun=1;HaplotypeScore=78.8417;InbreedingCoeff=0.9989;MQ=83.54;MQ0=0;MQRankSum=-1.878;QD=50.84;ReadPosRankSum=-4.617;VQSLOD=1.5617;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:96.30:0,96,1446	0/0:17,0:17:51.17:0,51,779	0/0:24,0:24:57.14:0,57,815	0/0:18,0:18:48.16:0,48,726	0/0:24,0:24:69.23:0,69,1056	0/0:39,0:39:99:0,114,1741	0/0:26,0:26:72.24:0,72,1102	1/1:4,29:35:99:1874,102,0	0/0:27,0:27:78.25:0,78,1173	0/0:31,0:31:90.31:0,90,1378	0/0:15,0:15:42.14:0,42,643	0/0:24,0:24:66.22:0,66,1011	0/0:24,0:24:72.18:0,72,1034	0/0:30,0:30:87.23:0,87,1264	0/0:35,0:35:96.33:0,96,1470	0/0:29,0:29:87.28:0,87,1311	0/0:29,0:29:87.27:0,87,1309	0/0:21,0:21:60.15:0,60,871	0/0:20,0:20:54.17:0,54,789	0/0:26,0:26:75.25:0,75,1147	0/0:34,0:34:99:0,102,1536	0/0:28,0:28:84.29:0,84,1283	0/0:14,0:14:39.13:0,39,597	0/0:22,0:22:63.21:0,63,965	0/0:23,0:23:66.22:0,66,1011	0/0:24,0:24:69.23:0,69,1056	0/0:41,0:41:99:0,120,1834	0/0:11,0:11:27.09:0,27,413
chr10	65040829	.	GA	G	506.26	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=1.246;DP=734;FS=0.000;HRun=9;HaplotypeScore=93.0042;InbreedingCoeff=0.9853;MQ=71.31;MQ0=3;MQRankSum=-0.776;QD=17.46;ReadPosRankSum=-3.711;VQSLOD=2.6363;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:96.10:0,96,1076	0/0:11,0:11:21.06:0,21,242	0/0:41,0:26:40.11:0,40,475	0/0:47,0:28:16.79:0,17,464	0/0:23,0:23:63.19:0,63,727	0/0:21,0:21:57.17:0,57,658	0/0:22,0:22:57.17:0,57,656	1/1:11,18:27:65.87:601,66,0	0/0:21,0:21:57.16:0,57,649	0/0:25,0:26:69.04:0,69,776	0/0:24,0:24:63.18:0,63,721	0/0:27,0:27:72.20:0,72,820	0/0:24,0:24:72.21:0,72,831	0/0:26,0:26:66.18:0,66,751	0/0:31,1:32:68.76:0,69,1007	0/0:31,0:31:87.24:0,87,986	0/0:36,0:36:96.28:0,96,1106	0/0:21,0:21:54.13:0,54,609	0/0:30,1:29:44.74:0,45,745	0/0:19,0:20:50.98:0,51,568	0/0:22,0:22:57.10:0,57,641	0/0:18,0:18:45.13:0,45,519	0/0:23,0:23:63.18:0,63,718	0/0:31,0:31:75.22:0,75,866	0/0:23,1:24:35.88:0,36,714	0/0:23,1:24:41.73:0,42,726	0/0:24,0:24:60.14:0,60,666	0/0:21,0:22:63.02:0,63,707
chr10	65040870	.	C	CA	710.59	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.576;DP=710;FS=0.000;HRun=6;HaplotypeScore=111.7470;InbreedingCoeff=0.9785;MQ=68.68;MQ0=1;MQRankSum=-4.429;QD=20.30;ReadPosRankSum=-3.937;VQSLOD=1.5843;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,111,1122	0/0:8,0:8:24.05:0,24,244	0/0:22,0:16:35.76:0,36,331	0/0:29,1:20:14.02:0,14,221	0/0:20,0:20:60.14:0,60,611	0/0:23,0:23:63.09:0,63,620	0/0:22,0:22:60.11:0,60,600	1/1:15,20:33:66.12:805,66,0	0/0:22,0:22:63.11:0,63,632	0/0:32,0:32:90.20:0,90,916	0/0:20,0:20:51.11:0,51,520	0/0:25,0:25:65.79:0,66,659	0/0:29,0:29:75.13:0,75,750	0/0:24,0:24:66.12:0,66,659	0/0:37,0:37:99:0,111,1118	0/0:35,0:35:99:0,99,1010	0/0:32,0:32:75.17:0,75,764	0/0:20,0:20:45.10:0,45,458	0/0:22,0:21:60.13:0,60,606	0/0:18,0:18:54.12:0,54,550	0/0:28,0:28:78.17:0,78,795	0/0:17,0:17:51.10:0,51,513	0/0:21,0:21:51.11:0,51,520	0/0:30,0:30:81.18:0,81,824	0/0:29,0:29:74.95:0,75,743	0/0:28,0:28:72.16:0,72,734	0/0:18,0:18:51.09:0,51,512	0/0:21,0:21:54.12:0,54,549
chr10	65041292	.	A	AAAGGGAC	1985.94	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-0.358;DP=447;FS=4.433;HRun=0;HaplotypeScore=105.7560;InbreedingCoeff=0.8821;MQ=76.94;MQ0=0;MQRankSum=-7.485;QD=56.74;ReadPosRankSum=-1.444;VQSLOD=2.9033;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,20:28:51.17:1760,51,0	0/0:13,0:13:33.11:0,33,777	0/0:7,0:7:18.06:0,18,410	0/0:13,0:13:21.07:0,21,475	0/0:12,0:12:18.06:0,18,446	0/0:7,0:7:21.07:0,21,520	0/0:32,0:32:87.30:0,87,2123	0/0:19,0:19:36.12:0,36,884	1/1:5,2:7:9.03:340,9,0	0/0:18,0:18:45.15:0,45,1070	0/0:6,0:6:15.01:0,15,317	0/0:16,0:16:48.16:0,48,1171	0/0:4,0:4:12.04:0,12,297	0/0:14,0:14:42.14:0,42,1022	0/0:8,0:8:21.07:0,21,521	0/0:5,0:5:15.05:0,15,372	0/0:22,0:21:51.15:0,51,1176	0/0:17,0:17:42.14:0,42,1024	0/0:19,0:19:39.13:0,39,959	0/0:6,0:6:15.05:0,15,341	0/0:65,0:65:99:0,175,4113	0/0:14,0:14:33.11:0,33,784	0/0:8,0:8:15.05:0,15,372	0/0:38,0:38:99:0,105,2535	0/0:18,0:18:42.14:0,42,1041	0/0:20,0:20:48.16:0,48,1181	0/0:8,0:8:24.08:0,24,585	0/0:3,0:3:9.03:0,9,223
chr10	65041294	.	A	AGGGACAA	2426.04	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=1.131;DP=448;FS=8.369;HRun=0;HaplotypeScore=105.2360;InbreedingCoeff=0.8966;MQ=76.02;MQ0=0;MQRankSum=-7.944;QD=69.32;ReadPosRankSum=-1.191;VQSLOD=3.5324;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:27:63.22:2119,63,0	0/0:13,0:13:33.11:0,33,777	0/0:6,0:6:18.06:0,18,410	0/0:13,0:13:21.07:0,21,475	0/0:11,0:11:18.06:0,18,446	0/0:7,0:7:21.07:0,21,520	0/0:34,0:34:87.30:0,87,2123	0/0:17,0:17:36.12:0,36,884	1/1:3,4:8:12.04:423,12,0	0/0:18,0:18:45.15:0,45,1070	0/0:6,0:6:15.01:0,15,317	0/0:17,0:17:48.16:0,48,1171	0/0:4,0:4:12.04:0,12,297	0/0:14,0:14:42.14:0,42,1022	0/0:8,0:8:21.07:0,21,521	0/0:6,0:6:15.05:0,15,372	0/0:22,0:21:51.15:0,51,1176	0/0:17,0:17:42.14:0,42,1024	0/0:20,0:20:39.13:0,39,959	0/0:6,0:6:15.05:0,15,341	0/0:65,0:65:99:0,178,4187	0/0:14,0:14:33.11:0,33,784	0/0:9,0:9:15.05:0,15,372	0/0:39,0:39:99:0,105,2535	0/0:17,0:17:42.14:0,42,1041	0/0:19,0:19:48.16:0,48,1181	0/0:8,0:8:24.08:0,24,585	0/0:3,0:3:9.03:0,9,223
chr10	65041672	.	TTTTGTTTGTTTGTTTG	T	12833.69	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=9.174;DP=622;FS=3.370;HRun=0;HaplotypeScore=230.7824;InbreedingCoeff=0.8250;MQ=57.79;MQ0=2;MQRankSum=-6.764;QD=27.66;ReadPosRankSum=0.543;VQSLOD=4.0316;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:37:12.04:413,12,0	1/1:7,8:15:9.03:395,9,0	0/0:29,0:24:8.99:0,9,144	0/0:16,0:14:8.96:0,9,140	0/0:10,0:16:21.07:0,21,920	1/1:3,15:17:21.07:905,21,0	1/1:18,0:18:8.93:67,9,0	0/0:23,0:22:2.98:0,3,105	1/1:4,0:22:18.06:670,18,0	1/1:9,13:22:26.82:557,27,0	1/1:3,9:12:12.04:340,12,0	1/1:12,22:34:24.08:1052,24,0	0/0:27,0:27:69.24:0,69,4789	1/1:4,9:13:3.01:132,3,0	1/1:11,20:31:24.08:1038,24,0	1/1:9,17:26:23.72:1051,24,0	1/1:7,15:22:12.04:526,12,0	1/1:12,0:11:11.91:86,12,0	1/1:15,7:21:21.02:614,21,0	1/1:10,8:18:11.97:396,12,0	1/1:26,0:27:2.06:127,2,0	1/1:6,12:18:23.90:617,24,0	0/0:13,0:13:30.10:0,30,2130	0/0:32,0:33:75.26:0,75,5028	1/1:7,12:19:18.06:789,18,0	1/1:18,26:44:63.04:1481,63,0	1/1:8,17:25:18.06:789,18,0	1/1:1,8:9:18.06:789,18,0
chr10	65042671	.	GA	G	1004.19	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=8.475;DP=722;FS=10.856;HRun=2;HaplotypeScore=71.5656;InbreedingCoeff=0.9982;MQ=76.59;MQ0=0;MQRankSum=-0.190;QD=33.47;ReadPosRankSum=-4.707;VQSLOD=1.0381;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,105,1525	0/0:11,0:11:33.11:0,33,492	0/0:18,0:18:51.15:0,51,717	0/0:11,0:11:27.05:0,27,380	0/0:27,0:27:81.25:0,81,1171	0/0:25,0:25:75.24:0,75,1102	0/0:29,0:29:84.28:0,84,1258	1/1:0,30:30:87.25:1099,87,0	0/0:35,0:35:99:0,105,1574	0/0:42,0:42:99:0,126,1868	0/0:20,0:20:57.19:0,57,854	0/0:38,0:38:99:0,108,1560	0/0:28,0:28:81.26:0,81,1185	0/0:30,0:30:87.27:0,87,1282	0/0:32,0:32:93.31:0,93,1389	0/0:22,0:22:66.22:0,66,986	0/0:34,0:34:99:0,102,1507	0/0:14,0:14:42.14:0,42,629	0/0:15,0:15:45.14:0,45,649	0/0:33,0:33:93.18:0,93,1325	0/0:28,0:28:84.25:0,84,1199	0/0:25,0:25:72.24:0,72,1059	0/0:24,0:24:69.23:0,69,1032	0/0:30,0:30:87.28:0,87,1281	0/0:10,0:10:30.10:0,30,450	0/0:26,0:26:75.23:0,75,1073	0/0:31,0:31:87.26:0,87,1240	0/0:17,0:17:51.17:0,51,764
chr10	65042705	.	CTT	C	680.45	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.088;DP=707;FS=0.000;HRun=8;HaplotypeScore=90.9888;InbreedingCoeff=0.9989;MQ=79.10;MQ0=0;MQRankSum=-2.976;QD=21.95;ReadPosRankSum=-3.448;VQSLOD=2.0462;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:81.28:0,81,1367	0/0:16,0:16:39.13:0,39,655	0/0:27,0:23:34.50:0,34,690	0/0:19,0:17:32.41:0,32,417	0/0:33,0:33:90.31:0,90,1515	0/0:26,0:26:72.25:0,72,1213	0/0:24,0:24:63.20:0,63,1036	1/1:11,20:31:66.06:775,66,0	0/0:32,0:32:90.31:0,90,1518	0/0:37,0:37:96.33:0,96,1623	0/0:23,0:23:63.22:0,63,1066	0/0:36,0:36:78.27:0,78,1313	0/0:23,0:23:66.23:0,66,1106	0/0:30,0:30:81.28:0,81,1361	0/0:30,0:30:84.29:0,84,1417	0/0:21,0:21:63.22:0,63,1066	0/0:31,0:32:90.30:0,90,1493	0/0:25,0:25:72.25:0,72,1218	0/0:24,0:24:63.22:0,63,1062	0/0:29,0:29:78.27:0,78,1304	0/0:28,0:29:80.76:0,81,1326	0/0:21,0:21:63.22:0,63,1054	0/0:18,0:18:48.16:0,48,776	0/0:25,0:25:66.21:0,66,1087	0/0:16,0:16:48.16:0,48,796	0/0:19,0:19:54.18:0,54,913	0/0:19,0:19:57.19:0,57,957	0/0:11,0:11:30.10:0,30,507
chr10	65046059	.	CTAAA	C	1899.57	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=8.845;DP=828;FS=2.078;HRun=0;HaplotypeScore=132.0638;InbreedingCoeff=0.9999;MQ=72.40;MQ0=0;MQRankSum=-4.440;QD=49.99;ReadPosRankSum=-5.209;VQSLOD=3.0689;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,157,4152	0/0:19,0:19:57.20:0,57,1589	0/0:17,0:17:50.59:0,51,958	0/0:14,0:14:37.91:0,38,790	0/0:25,0:25:72.23:0,72,1866	0/0:29,0:28:87.28:0,87,2235	0/0:30,0:30:90.31:0,90,2502	1/1:0,38:38:99:1994,114,0	0/0:36,0:36:99:0,108,2788	0/0:37,0:37:99:0,108,2981	0/0:17,0:17:48.12:0,48,1132	0/0:52,0:52:99:0,154,4132	0/0:41,0:41:99:0,123,3398	0/0:34,0:34:99:0,99,2581	0/0:49,0:49:99:0,141,3920	0/0:26,0:26:75.26:0,75,2054	0/0:33,0:33:96.31:0,96,2573	0/0:21,0:21:57.20:0,57,1555	0/0:24,0:24:72.25:0,72,1822	0/0:21,0:21:57.19:0,57,1538	0/0:44,0:44:99:0,132,3590	0/0:20,0:20:57.20:0,57,1556	0/0:19,0:19:57.20:0,57,1543	0/0:33,0:33:99:0,99,2732	0/0:25,0:25:75.26:0,75,2037	0/0:33,0:33:96.32:0,96,2558	0/0:24,0:24:69.24:0,69,1881	0/0:14,0:14:42.14:0,42,1164
chr10	65046231	.	AAAC	A	615	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.017;DP=780;FS=8.388;HRun=0;HaplotypeScore=115.1638;InbreedingCoeff=0.9814;MQ=62.74;MQ0=0;MQRankSum=-5.353;QD=29.29;ReadPosRankSum=-3.467;VQSLOD=2.3671;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,147,2932	0/0:6,0:6:15.02:0,15,243	0/0:19,0:16:26.84:0,27,479	0/0:24,0:23:48.16:0,48,893	0/0:36,0:36:93.32:0,93,1900	0/0:20,0:20:51.18:0,51,1070	0/0:30,0:30:75.26:0,75,1583	1/1:5,16:21:51.10:710,51,0	0/0:29,0:29:87.18:0,87,1740	0/0:30,0:30:78.23:0,78,1600	0/0:23,0:23:57.20:0,57,1193	0/0:43,0:43:99:0,120,2426	0/0:36,0:36:93.29:0,93,1854	0/0:20,0:20:54.18:0,54,1128	0/0:39,0:39:99:0,99,2079	0/0:30,0:30:81.26:0,81,1638	0/0:36,0:36:99:0,99,1994	0/0:18,0:18:42.11:0,42,783	0/0:24,0:23:48.16:0,48,945	0/0:21,0:21:57.20:0,57,1215	0/0:39,0:39:99:0,99,2011	0/0:29,0:29:75.04:0,75,1335	0/0:31,0:31:78.27:0,78,1629	0/0:41,0:41:99:0,120,2520	0/0:19,0:19:51.18:0,51,1088	0/0:32,0:32:87.27:0,87,1744	0/0:24,0:24:69.22:0,69,1421	0/0:8,0:8:24.08:0,24,515
chr10	65046442	.	A	AG	595.70	PASS	AB=0.604;AC=1;AF=0.018;AN=56;BaseQRankSum=2.136;DP=647;FS=5.615;HRun=1;HaplotypeScore=170.9175;InbreedingCoeff=-0.0209;MQ=60.64;MQ0=22;MQRankSum=-3.728;QD=20.54;ReadPosRankSum=-1.881;VQSLOD=2.9583;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:15.04:0,15,191	0/0:16,0:14:12.02:0,12,124	0/0:35,0:18:39.85:0,40,416	0/0:50,0:24:44.31:0,44,411	0/0:22,0:21:57.05:0,57,712	0/0:20,0:19:33.07:0,33,392	0/0:15,0:12:24.95:0,25,277	0/1:10,19:27:26.09:670,0,26	0/0:15,0:15:23.99:0,24,257	0/0:25,0:22:60.13:0,60,723	0/0:23,0:23:10.57:0,11,104	0/0:19,0:19:15.75:0,16,201	0/0:23,0:22:65.94:0,66,800	0/0:19,0:18:20.13:0,20,189	0/0:27,0:27:18.89:0,19,172	0/0:16,0:15:18.91:0,19,204	0/0:19,0:19:32.75:0,33,391	0/0:10,0:9:14.45:0,14,220	0/0:29,0:20:60.12:0,60,714	0/0:31,0:30:59.76:0,60,675	0/0:14,0:12:11.98:0,12,108	0/0:26,0:26:24.93:0,25,270	0/0:23,0:23:63.20:0,63,812	0/0:33,0:33:93.30:0,93,1202	0/0:17,0:17:21.06:0,21,265	0/0:29,0:25:66.65:0,67,820	0/0:24,0:23:51.12:0,51,607	0/0:17,0:14:36.07:0,36,426
chr10	65046494	.	AAG	A	1084.58	PASS	AB=0.987;AC=7;AF=0.125;AN=56;BaseQRankSum=5.202;DP=660;FS=9.210;HRun=0;HaplotypeScore=144.5304;InbreedingCoeff=0.7470;MQ=68.74;MQ0=21;MQRankSum=-3.581;QD=7.64;ReadPosRankSum=0.312;VQSLOD=2.4722;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,25:30:60.03:673,60,0	0/0:9,0:8:6.02:0,6,95	0/0:43,0:21:7.49:0,7,244	0/1:75,0:31:13.85:14,0,214	0/0:31,0:31:44.60:0,45,1149	0/0:23,0:22:34.67:0,35,529	0/0:17,0:17:20.93:0,21,292	1/1:14,0:21:26.23:122,26,0	1/1:3,11:14:36.07:423,36,0	0/0:18,0:18:48.12:0,48,672	0/0:16,0:16:24.08:0,24,369	0/0:12,0:11:9.03:0,9,144	0/0:17,0:17:45.14:0,45,710	0/0:20,0:19:24.07:0,24,346	0/0:17,0:16:15.05:0,15,221	0/0:13,0:11:12.04:0,12,196	0/0:26,0:25:28.61:0,29,468	0/0:14,0:12:8.88:0,9,169	0/0:26,0:26:51.17:0,51,792	0/0:26,0:25:60.20:0,60,947	0/0:26,0:25:18.06:0,18,269	0/0:21,0:19:36.12:0,36,542	0/0:24,0:24:60.20:0,60,967	0/0:31,0:31:66.22:0,66,1058	0/0:18,0:17:21.06:0,21,309	0/0:31,0:29:77.87:0,78,1038	0/0:20,0:19:24.08:0,24,385	0/0:19,0:19:36.06:0,36,521
chr10	65046535	.	C	CAGAG	10140.28	PASS	AB=0.688;AC=35;AF=0.648;AN=54;BaseQRankSum=-10.537;DP=713;FS=0.000;HRun=0;HaplotypeScore=111.1707;InbreedingCoeff=0.6948;MQ=54.57;MQ0=37;MQRankSum=1.668;QD=21.76;ReadPosRankSum=3.366;VQSLOD=4.6203;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:30:39.47:0,39,304	1/1:1,5:5:3.01:81,3,0	0/0:25,0:6:8.78:0,9,169	0/0:48,0:11:13.51:0,14,253	0/0:30,0:30:72.10:0,72,1264	1/1:4,26:29:0.77:708,1,0	./.	0/0:20,0:13:23.91:0,24,282	0/1:14,0:14:19.81:20,0,154	1/1:4,23:24:60.08:1090,60,0	1/1:2,23:26:15.05:389,15,0	1/1:1,20:20:15.05:401,15,0	0/0:14,0:14:42.09:0,42,694	1/1:2,21:22:18.06:484,18,0	1/1:1,18:19:15.05:383,15,0	0/1:2,11:10:11.06:74,0,11	1/1:3,29:32:22.40:554,22,0	1/1:3,19:21:22.71:531,23,0	1/1:9,16:22:43.33:787,43,0	1/1:2,26:27:33.11:726,33,0	1/1:2,32:36:11.89:240,12,0	1/1:1,18:17:6.02:161,6,0	0/0:33,0:33:96.04:0,96,1338	0/0:30,0:30:69.16:0,69,1132	0/1:2,20:22:0.37:443,0,0	1/1:5,39:42:99:1878,103,0	1/1:4,21:25:14.96:384,15,0	1/1:0,24:24:30.10:807,30,0
chr10	65046539	.	CAGAG	C	1219.35	PASS	AB=0.993;AC=14;AF=0.250;AN=56;BaseQRankSum=3.041;DP=685;FS=24.765;HRun=0;HaplotypeScore=133.7653;InbreedingCoeff=0.0413;MQ=53.75;MQ0=32;MQRankSum=-0.926;QD=4.06;ReadPosRankSum=-0.535;VQSLOD=0.9698;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:23,8:30:19.16:254,19,0	0/1:7,0:6:3.46:3,0,19	0/0:20,0:6:12.44:0,12,101	0/0:38,0:9:15.45:0,15,184	0/0:32,0:32:62.02:0,62,1625	0/0:29,0:27:17.05:0,17,534	0/0:16,0:16:2.89:0,3,25	0/0:17,0:10:14.57:0,15,114	1/1:10,5:15:26.99:350,27,0	0/1:26,0:23:99:109,0,614	0/0:26,0:26:24.15:0,24,338	0/0:20,0:19:15.05:0,15,257	0/0:16,0:16:48.08:0,48,926	0/0:23,0:22:13.90:0,14,366	0/0:20,0:19:3.75:0,4,247	0/1:13,1:11:25.73:26,0,62	0/1:33,0:31:6.51:7,0,266	0/1:24,0:22:56.12:56,0,263	0/1:20,0:19:99:159,0,292	0/1:29,0:28:70.23:70,0,430	0/1:37,0:35:3.25:3,0,141	0/0:15,0:13:15.12:0,15,174	0/0:32,0:32:95.87:0,96,1617	0/0:30,0:30:66.18:0,66,1358	0/1:22,0:21:2.49:2,0,215	0/1:42,0:40:99:334,0,899	0/0:23,0:22:17.55:0,18,272	0/0:25,0:25:1.80:0,2,439
chr10	65046982	.	TAAGAGAAGCCA	T	1903.09	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=8.200;DP=655;FS=3.642;HRun=0;HaplotypeScore=205.5685;InbreedingCoeff=0.9910;MQ=85.99;MQ0=0;MQRankSum=-4.444;QD=70.48;ReadPosRankSum=-3.399;VQSLOD=2.7312;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,102,5560	0/0:6,0:6:18.06:0,18,1068	0/0:23,0:23:69.24:0,69,3254	0/0:24,0:24:63.22:0,63,3040	0/0:25,0:25:75.26:0,75,4140	0/0:21,0:21:63.22:0,63,3569	0/0:23,0:23:66.23:0,66,3702	1/1:0,27:27:81.06:1998,81,0	0/0:18,0:18:54.19:0,54,2931	0/0:30,0:30:90.31:0,90,5117	0/0:21,0:21:63.22:0,63,3448	0/0:35,0:35:99:0,105,5544	0/0:25,0:25:75.26:0,75,4347	0/0:14,0:14:42.14:0,42,2132	0/0:33,0:33:99:0,99,5382	0/0:19,0:19:57.20:0,57,3108	0/0:33,0:32:99:0,99,5181	0/0:19,0:19:57.20:0,57,3168	0/0:19,0:19:57.17:0,57,2955	0/0:24,0:24:72.25:0,72,4031	0/0:27,0:27:81.26:0,81,4456	0/0:16,0:16:45.15:0,45,2568	0/0:26,0:26:78.27:0,78,4334	0/0:28,0:28:84.29:0,84,4667	0/0:22,0:22:66.23:0,66,3663	0/0:29,0:29:87.29:0,87,4641	0/0:23,0:23:66.23:0,66,3483	0/0:10,0:10:27.09:0,27,1580
chr10	65047995	.	G	GGAAA	2061.20	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-6.009;DP=777;FS=0.000;HRun=0;HaplotypeScore=124.5988;InbreedingCoeff=0.9978;MQ=86.46;MQ0=0;MQRankSum=-7.329;QD=54.24;ReadPosRankSum=-4.895;VQSLOD=3.3663;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:57:99:0,147,2635	0/0:12,0:12:36.10:0,36,602	0/0:27,0:27:57.58:0,58,931	0/0:26,0:26:65.63:0,66,1086	0/0:38,0:38:99:0,111,1973	0/0:23,0:23:66.21:0,66,1177	0/0:23,0:23:66.23:0,66,1215	1/1:12,25:38:90.24:2156,90,0	0/0:28,0:28:75.23:0,75,1306	0/0:28,0:28:78.27:0,78,1430	0/0:23,0:23:66.20:0,66,1170	0/0:28,0:28:84.28:0,84,1518	0/0:24,0:24:54.16:0,54,927	0/0:21,0:21:60.20:0,60,1075	0/0:36,0:36:99:0,105,1932	0/0:25,0:25:75.26:0,75,1368	0/0:30,0:30:75.20:0,75,1314	0/0:21,0:22:51.16:0,51,907	0/0:29,0:29:81.26:0,81,1456	0/0:15,0:15:39.13:0,39,711	0/0:53,0:53:99:0,147,2640	0/0:21,0:21:57.19:0,57,1019	0/0:29,0:29:81.26:0,81,1460	0/0:24,0:24:43.24:0,43,1051	0/0:20,0:20:60.21:0,60,1103	0/0:33,0:33:93.30:0,93,1650	0/0:35,0:35:99:0,102,1783	0/0:9,0:9:24.08:0,24,442
chr10	65048348	.	C	CGTGGAT	3216.73	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.058;DP=749;FS=15.416;HRun=0;HaplotypeScore=155.4251;InbreedingCoeff=0.9953;MQ=81.27;MQ0=0;MQRankSum=-9.212;QD=76.59;ReadPosRankSum=-5.940;VQSLOD=2.0970;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,129,2625	0/0:13,0:13:39.12:0,39,857	0/0:19,0:19:41.64:0,42,902	0/0:21,0:21:49.02:0,49,913	0/0:30,0:30:87.16:0,87,1810	0/0:23,0:23:69.20:0,69,1541	0/0:29,0:29:84.24:0,84,1841	1/1:10,27:42:99:3312,114,0	0/0:28,0:28:81.24:0,81,1810	0/0:25,0:25:72.25:0,72,1710	0/0:7,0:7:21.03:0,21,452	0/0:32,0:32:93.15:0,93,2175	0/0:28,0:28:78.25:0,78,1805	0/0:31,0:31:87.30:0,87,2060	0/0:32,0:32:93.32:0,93,2163	0/0:27,0:27:81.26:0,81,1896	0/0:21,0:21:60.16:0,60,1382	0/0:24,0:24:66.17:0,66,1475	0/0:24,0:24:65.89:0,66,1465	0/0:22,0:22:57.20:0,57,1324	0/0:55,0:55:99:0,166,3837	0/0:27,0:27:78.27:0,78,1833	0/0:22,0:22:66.18:0,66,1494	0/0:40,0:40:99:0,120,2702	0/0:27,0:27:72.21:0,72,1661	0/0:26,0:26:78.14:0,78,1691	0/0:20,0:20:57.12:0,57,1230	0/0:10,0:10:30.10:0,30,720
chr10	65049116	.	TC	T	1039.13	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.951;DP=473;FS=10.724;HRun=1;HaplotypeScore=53.8330;InbreedingCoeff=0.9331;MQ=73.10;MQ0=0;MQRankSum=1.119;QD=32.47;ReadPosRankSum=-4.081;VQSLOD=1.1383;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:48.11:0,48,631	0/0:9,0:9:27.08:0,27,365	0/0:15,0:15:31.52:0,32,468	0/0:12,0:12:9.64:0,10,173	0/0:33,0:33:99:0,99,1360	0/0:14,0:14:42.13:0,42,568	0/0:14,0:14:42.11:0,42,576	1/1:1,31:32:93.23:1134,93,0	0/0:13,0:13:39.09:0,39,504	0/0:14,0:14:42.11:0,42,551	0/0:8,0:8:24.07:0,24,305	0/0:13,0:13:39.13:0,39,554	0/0:19,0:19:57.16:0,57,768	0/0:16,0:16:48.15:0,48,657	0/0:14,0:14:42.11:0,42,564	0/0:18,0:18:54.14:0,54,677	0/0:32,0:32:96.26:0,96,1305	0/0:23,0:23:69.21:0,69,942	0/0:13,0:13:39.12:0,39,554	0/0:17,0:17:51.15:0,51,693	0/0:10,0:10:30.10:0,30,439	0/0:10,0:10:30.09:0,30,408	0/0:19,0:19:54.12:0,54,688	0/0:5,0:5:15.05:0,15,203	0/0:21,0:21:63.17:0,63,836	0/0:22,0:22:66.19:0,66,885	0/0:27,0:27:81.19:0,81,1071	0/0:13,0:13:39.09:0,39,546
chr10	65049143	.	T	TG	1122.67	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=9.494;DP=536;FS=4.769;HRun=1;HaplotypeScore=64.5360;InbreedingCoeff=0.9713;MQ=77.19;MQ0=0;MQRankSum=-8.351;QD=36.22;ReadPosRankSum=-4.064;VQSLOD=2.1877;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:69.21:0,69,944	0/0:10,0:10:30.10:0,30,420	0/0:16,0:16:34.88:0,35,507	0/0:14,0:14:13.83:0,14,432	0/0:30,0:30:87.19:0,87,1215	0/0:17,0:17:51.14:0,51,674	0/0:16,0:16:48.16:0,48,670	1/1:1,30:31:90.24:1218,90,0	0/0:18,0:18:51.17:0,51,713	0/0:17,0:17:48.16:0,48,668	0/0:13,0:13:36.12:0,36,504	0/0:16,0:16:48.14:0,48,653	0/0:20,0:20:60.20:0,60,832	0/0:20,0:20:60.19:0,60,822	0/0:17,0:17:51.16:0,51,699	0/0:22,0:22:66.22:0,66,915	0/0:27,0:27:81.27:0,81,1131	0/0:21,0:21:63.21:0,63,878	0/0:23,0:23:69.23:0,69,954	0/0:20,0:20:60.20:0,60,837	0/0:18,0:18:54.16:0,54,732	0/0:14,0:14:42.14:0,42,584	0/0:20,0:20:60.20:0,60,837	0/0:6,0:6:18.06:0,18,250	0/0:19,0:19:57.18:0,57,781	0/0:18,0:18:54.18:0,54,752	0/0:31,0:31:93.31:0,93,1298	0/0:18,0:18:54.18:0,54,750
chr10	65049145	.	GAGA	G	1364.99	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=9.180;DP=538;FS=3.713;HRun=0;HaplotypeScore=85.9427;InbreedingCoeff=0.9910;MQ=78.22;MQ0=0;MQRankSum=-8.684;QD=45.50;ReadPosRankSum=-3.184;VQSLOD=4.5770;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:75.26:0,75,1835	0/0:10,0:10:30.10:0,30,739	0/0:16,0:16:44.90:0,45,975	0/0:15,0:15:31.15:0,31,958	0/0:30,0:30:87.30:0,87,2135	0/0:16,0:16:48.16:0,48,1158	0/0:16,0:16:48.16:0,48,1183	1/1:1,29:30:90.31:1460,90,0	0/0:19,0:19:57.18:0,57,1349	0/0:17,0:17:51.18:0,51,1257	0/0:12,0:12:36.12:0,36,887	0/0:16,0:16:48.16:0,48,1160	0/0:21,0:21:63.22:0,63,1517	0/0:19,0:19:57.20:0,57,1404	0/0:16,0:16:48.16:0,48,1184	0/0:22,0:22:66.23:0,66,1624	0/0:27,0:27:81.28:0,81,1997	0/0:21,0:21:63.22:0,63,1553	0/0:22,0:22:66.23:0,66,1635	0/0:20,0:20:60.21:0,60,1479	0/0:18,0:18:54.16:0,54,1280	0/0:14,0:14:42.14:0,42,1035	0/0:21,0:21:63.22:0,63,1550	0/0:6,0:6:18.06:0,18,444	0/0:18,0:18:54.19:0,54,1329	0/0:17,0:17:51.18:0,51,1258	0/0:35,0:35:99:0,105,2517	0/0:19,0:19:57.20:0,57,1373
chr10	65051526	.	T	TCTGAATGGGATTCTCTGATCCC	89903.39	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=2.370;DP=610;FS=4.341;HRun=0;HaplotypeScore=307.5451;InbreedingCoeff=0.9991;MQ=84.60;MQ0=0;MQRankSum=-16.822;QD=192.93;ReadPosRankSum=2.150;VQSLOD=4.1210;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:23,5:32:54.14:4243,54,0	1/1:7,1:10:27.09:2379,27,0	0/0:26,0:26:72.18:0,72,3177	0/0:29,0:29:84.28:0,84,3608	0/0:21,0:21:60.19:0,60,2768	1/1:9,8:19:45.15:3837,45,0	1/1:28,0:28:66.23:5193,66,0	1/1:34,0:34:90.30:5811,90,0	1/1:9,8:18:48.16:4050,48,0	1/1:19,6:26:69.22:5489,69,0	1/1:12,4:17:42.14:3277,42,0	1/1:15,10:27:72.25:6366,72,0	0/0:23,0:23:63.22:0,63,3695	1/1:20,3:24:69.71:5726,70,0	1/1:17,3:22:57.19:4090,57,0	1/1:18,7:26:72.25:6123,72,0	1/1:18,1:20:45.11:3412,45,0	1/1:10,3:14:39.13:3008,39,0	1/1:15,2:21:51.05:2679,51,0	1/1:12,3:18:42.10:3000,42,0	1/1:15,1:20:24.08:1891,24,0	1/1:8,5:15:36.12:2955,36,0	0/0:11,0:11:33.10:0,33,1694	0/0:34,0:34:96.33:0,96,5404	1/1:13,6:21:48.16:4245,48,0	1/1:12,5:19:54.17:4284,54,0	1/1:17,8:26:69.24:5902,69,0	1/1:9,0:9:27.09:1944,27,0
chr10	65052171	.	T	TTA	1459.33	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-6.229;DP=766;FS=5.244;HRun=0;HaplotypeScore=129.9485;InbreedingCoeff=0.9991;MQ=76.30;MQ0=0;MQRankSum=-2.300;QD=41.70;ReadPosRankSum=-3.816;VQSLOD=3.6814;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,141,1869	0/0:11,0:11:33.08:0,33,435	0/0:20,0:20:60.06:0,60,677	0/0:17,0:17:39.50:0,39,480	0/0:21,0:21:63.17:0,63,831	0/0:23,0:23:69.21:0,69,950	0/0:38,0:38:99:0,114,1562	1/1:0,29:35:99:1554,102,0	0/0:21,0:21:60.11:0,60,780	0/0:35,0:35:99:0,102,1381	0/0:15,0:15:42:0,42,516	0/0:48,0:48:99:0,141,1907	0/0:31,0:31:90.23:0,90,1183	0/0:23,0:23:69.18:0,69,891	0/0:38,0:38:99:0,114,1522	0/0:30,0:30:90.20:0,90,1191	0/0:32,0:32:93.19:0,93,1194	0/0:21,0:20:63.17:0,63,875	0/0:26,0:26:78.21:0,78,1031	0/0:23,0:23:66.03:0,66,862	0/0:32,0:32:87.22:0,87,1183	0/0:19,0:19:56.81:0,57,723	0/0:25,0:25:67.94:0,68,893	0/0:41,0:41:99:0,123,1618	0/0:22,0:21:63.17:0,63,878	0/0:29,0:29:83.42:0,83,1078	0/0:29,0:29:83.88:0,84,1108	0/0:10,0:10:30.10:0,30,428
chr10	65052791	.	TA	T	708.92	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.545;DP=606;FS=11.211;HRun=2;HaplotypeScore=60.9648;InbreedingCoeff=0.9873;MQ=80.54;MQ0=0;MQRankSum=-2.524;QD=32.22;ReadPosRankSum=-3.660;VQSLOD=1.2675;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:96.33:0,96,1436	0/0:7,0:7:18.04:0,18,249	0/0:16,0:16:45.13:0,45,632	0/0:14,0:14:39.07:0,39,509	0/0:16,0:16:48.15:0,48,698	0/0:22,0:22:66.22:0,66,988	0/0:29,0:29:81.27:0,81,1214	1/1:0,22:22:63.19:804,63,0	0/0:20,0:20:60.20:0,60,897	0/0:26,0:26:78.26:0,78,1153	0/0:10,0:10:30.10:0,30,450	0/0:31,0:31:93.32:0,93,1393	0/0:22,0:22:66.22:0,66,988	0/0:21,0:21:63.21:0,63,943	0/0:24,0:24:72.20:0,72,1052	0/0:15,0:15:45.15:0,45,673	0/0:26,0:26:78.24:0,78,1129	0/0:33,0:32:99:0,99,1477	0/0:20,0:20:57.19:0,57,852	0/0:12,0:12:36.11:0,36,511	0/0:56,0:55:99:0,159,2301	0/0:16,0:16:42.13:0,42,608	0/0:15,0:15:45.12:0,45,632	0/0:21,0:21:63.21:0,63,944	0/0:26,0:26:75.25:0,75,1123	0/0:21,0:21:60.19:0,60,873	0/0:26,0:24:75.22:0,75,1099	0/0:7,0:7:21.07:0,21,315
chr10	65055025	.	C	CT	14733.03	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-5.582;DP=484;FS=3.165;HRun=0;HaplotypeScore=52.4424;InbreedingCoeff=0.9882;MQ=67.18;MQ0=1;MQRankSum=-4.868;QD=39.93;ReadPosRankSum=2.412;VQSLOD=5.2774;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,44:44:99:1588,102,0	1/1:0,4:4:12.04:178,12,0	0/0:21,0:18:51.13:0,51,685	0/0:21,0:21:29.13:0,29,665	0/0:10,0:10:27.09:0,27,377	1/1:0,15:15:39.13:609,39,0	1/1:1,19:18:48.16:754,48,0	1/1:4,20:21:54.17:829,54,0	1/1:0,17:17:48.16:752,48,0	1/1:1,13:14:39.13:617,39,0	1/1:0,11:11:27.09:430,27,0	1/1:0,25:25:57.14:871,57,0	0/0:26,0:26:75.25:0,75,1039	1/1:1,16:17:45.15:716,45,0	1/1:0,12:12:27.09:431,27,0	1/1:0,10:10:27.09:431,27,0	1/1:0,22:22:54.18:861,54,0	1/1:0,21:21:51.17:815,51,0	1/1:0,13:13:39.11:597,39,0	1/1:0,8:8:21.07:321,21,0	1/1:1,41:42:99:1725,108,0	1/1:0,9:9:24.08:370,24,0	0/0:11,0:11:33.11:0,33,459	0/0:25,0:25:69.23:0,69,963	1/1:0,12:12:36.12:573,36,0	1/1:0,12:12:36.09:548,36,0	1/1:0,12:12:30.10:479,30,0	1/1:0,5:5:15.05:240,15,0
chr10	65055178	.	C	CAT	5930.26	PASS	AB=0.833;AC=42;AF=0.750;AN=56;BaseQRankSum=-5.626;DP=336;FS=3.868;HRun=0;HaplotypeScore=41.8321;InbreedingCoeff=0.7318;MQ=67.37;MQ0=2;MQRankSum=0.777;QD=23.07;ReadPosRankSum=1.099;VQSLOD=4.9015;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:26:21.06:231,21,0	1/1:1,5:6:12.04:195,12,0	0/0:17,0:9:3.63:0,4,14	0/0:20,0:9:5.96:0,6,27	0/0:13,0:13:15.05:0,15,185	1/1:3,9:12:15.05:245,15,0	0/1:3,3:6:57.83:132,0,58	0/1:33,0:28:0.07:0,0,0	1/1:9,0:9:24.06:255,24,0	1/1:2,6:9:18.06:294,18,0	1/1:2,6:9:18.05:271,18,0	1/1:5,8:14:18.06:293,18,0	0/0:11,0:11:30.09:0,30,367	1/1:3,3:6:12.04:196,12,0	1/1:1,5:6:12.04:196,12,0	1/1:1,4:5:6.02:98,6,0	1/1:3,17:20:11.26:697,11,0	1/1:2,12:14:27.09:440,27,0	1/1:3,7:9:21.07:333,21,0	1/1:6,5:11:15.05:245,15,0	1/1:2,5:7:6.02:98,6,0	1/1:0,3:3:9.03:147,9,0	0/0:7,0:7:15.05:0,15,185	0/0:8,0:8:15.05:0,15,184	1/1:5,6:11:15.05:245,15,0	1/1:2,10:12:30.10:489,30,0	1/1:4,9:13:21.07:342,21,0	1/1:0,14:14:30.10:489,30,0
chr10	65055192	.	T	TAC	3138.92	PASS	AB=0.998;AC=33;AF=0.589;AN=56;BaseQRankSum=6.363;DP=311;FS=7.246;HRun=0;HaplotypeScore=46.1483;InbreedingCoeff=0.1088;MQ=71.64;MQ0=6;MQRankSum=-1.653;QD=12.81;ReadPosRankSum=5.772;VQSLOD=1.7421;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,20:23:21.07:383,21,0	1/1:6,0:6:11.99:110,12,0	0/0:24,0:8:0.65:0,1,17	0/1:39,0:17:11.24:11,0,41	0/0:11,0:11:18.05:0,18,239	1/1:12,0:11:14.97:122,15,0	0/1:6,0:6:59.83:60,0,92	0/0:7,0:6:3:0,3,26	1/1:0,8:8:24.08:438,24,0	0/1:9,0:9:51.77:102,0,52	0/1:7,0:7:6.07:102,0,6	1/1:9,0:9:17.98:152,18,0	0/0:11,0:11:33.10:0,33,451	1/1:6,0:6:11.98:99,12,0	1/1:5,0:5:11.97:96,12,0	0/1:5,0:5:15.93:39,0,16	0/1:22,0:22:37.71:325,0,38	1/1:14,0:14:5.05:202,5,0	0/1:10,0:9:25.89:133,0,26	1/1:5,0:5:14.97:120,15,0	1/1:5,0:5:5.99:48,6,0	0/1:4,0:4:12.94:60,0,13	0/0:6,0:6:15.05:0,15,213	0/0:6,0:6:18.03:0,18,220	0/1:7,0:7:6.97:99,0,7	1/1:10,0:10:29.97:264,30,0	0/1:15,0:15:63.75:144,0,64	0/1:16,0:16:10.92:211,0,11
chr10	65055239	.	AT	A	191.69	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.308;DP=301;FS=9.427;HRun=3;HaplotypeScore=37.9550;InbreedingCoeff=0.6214;MQ=62.15;MQ0=8;MQRankSum=-4.200;QD=17.43;ReadPosRankSum=-2.142;VQSLOD=1.7914;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:57.66:0,58,802	0/0:7,0:7:18.06:0,18,255	0/0:14,0:4:8.65:0,9,58	0/0:18,0:5:3:0,3,29	0/0:10,0:10:21.07:0,21,294	0/0:11,0:10:15.01:0,15,189	0/0:9,0:9:27.09:0,27,372	1/1:0,11:8:24.07:285,24,0	0/0:8,0:8:24.08:0,24,329	0/0:16,0:16:48.16:0,48,667	0/0:16,0:15:30.10:0,30,428	0/0:7,0:7:15.05:0,15,204	0/0:7,0:7:21.02:0,21,257	0/0:5,0:5:12.01:0,12,150	0/0:4,0:4:12.01:0,12,142	0/0:8,0:8:21:0,21,250	0/0:27,0:27:75.20:0,75,1028	0/0:16,0:16:45.15:0,45,640	0/0:8,0:8:24.08:0,24,334	0/0:4,0:4:12.03:0,12,150	0/0:3,0:3:6.02:0,6,86	0/0:5,0:5:15.04:0,15,198	0/0:8,0:8:18.06:0,18,251	0/0:4,0:4:12.04:0,12,169	0/0:6,0:6:12.04:0,12,169	0/0:10,0:10:30.09:0,30,413	0/0:19,0:19:45.08:0,45,595	0/0:18,0:18:42.14:0,42,585
chr10	65056250	.	T	TG	383.31	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.649;DP=768;FS=18.813;HRun=1;HaplotypeScore=81.9081;InbreedingCoeff=0.9965;MQ=65.42;MQ0=0;MQRankSum=-6.346;QD=18.25;ReadPosRankSum=-3.073;VQSLOD=2.1667;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:55:99:0,150,1896	0/0:10,0:10:24.08:0,24,311	0/0:25,0:25:72.22:0,72,915	0/0:29,0:28:69.25:0,69,953	0/0:27,0:27:72.23:0,72,923	0/0:22,0:22:45.15:0,45,584	0/0:26,1:27:36.85:0,37,910	1/1:5,16:21:36.08:478,36,0	0/0:28,0:28:54.14:0,54,680	0/0:26,0:26:75.18:0,75,927	0/0:22,0:22:42.14:0,42,545	0/0:39,0:39:90.26:0,90,1139	0/0:33,0:33:66.05:0,66,853	0/0:28,0:28:60.18:0,60,764	0/0:26,0:26:48.16:0,48,623	0/0:23,0:23:30.10:0,30,390	0/0:37,0:37:93.30:0,93,1203	0/0:33,0:33:90.29:0,90,1166	0/0:30,0:30:87.28:0,87,1126	0/0:15,0:15:42.14:0,42,541	0/0:60,0:60:99:0,181,2335	0/0:16,0:16:42.08:0,42,525	0/0:13,0:13:30.10:0,30,387	0/0:37,0:37:90.28:0,90,1154	0/0:23,0:23:60.13:0,60,742	0/0:28,0:28:84.25:0,84,1074	0/0:21,0:21:51.12:0,51,631	0/0:13,0:13:36.12:0,36,467
chr10	65057187	.	A	AC	86.50	PASS	AB=0.673;AC=1;AF=0.018;AN=56;BaseQRankSum=3.359;DP=625;FS=0.000;HRun=0;HaplotypeScore=72.5289;InbreedingCoeff=-0.0192;MQ=58.50;MQ0=0;MQRankSum=-3.345;QD=2.62;ReadPosRankSum=-0.972;VQSLOD=2.5207;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,108,1467	0/0:5,0:5:15.05:0,15,210	0/0:25,0:22:63.13:0,63,800	0/0:17,0:14:42.14:0,42,587	0/0:21,0:21:30.10:0,30,419	0/0:15,0:14:39.13:0,39,544	0/0:22,0:22:63.18:0,63,845	0/1:17,16:18:99:161,0,207	0/0:19,0:19:51.14:0,51,693	0/0:18,0:18:48.16:0,48,669	0/0:12,0:12:18.06:0,18,251	0/0:34,0:34:93.31:0,93,1299	0/0:14,0:14:36.12:0,36,503	0/0:21,0:21:57.14:0,57,756	0/0:24,0:24:51.17:0,51,712	0/0:13,0:13:33.11:0,33,461	0/0:37,0:37:99:0,102,1426	0/0:34,0:34:99:0,99,1383	0/0:19,0:19:54.17:0,54,741	0/0:15,0:15:42.14:0,42,578	0/0:35,0:35:96.32:0,96,1341	0/0:24,0:24:36.12:0,36,502	0/0:21,0:21:33.11:0,33,460	0/0:29,0:29:87.29:0,87,1217	0/0:17,0:16:24.07:0,24,320	0/0:29,0:29:84.27:0,84,1159	0/0:21,0:21:51.17:0,51,713	0/0:12,0:12:30.10:0,30,419
chr10	65057254	.	G	GC	514.95	PASS	AB=0.689;AC=1;AF=0.018;AN=56;BaseQRankSum=5.590;DP=614;FS=21.136;HRun=0;HaplotypeScore=67.0480;InbreedingCoeff=-0.0254;MQ=80.79;MQ0=0;MQRankSum=-5.360;QD=16.61;ReadPosRankSum=-2.373;VQSLOD=2.6935;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:69.23:0,69,963	0/0:6,0:6:14.98:0,15,209	0/0:28,0:28:78.72:0,79,1050	0/0:22,0:22:42.32:0,42,756	0/0:9,0:9:18.06:0,18,252	0/0:10,0:10:27.09:0,27,376	0/0:32,0:32:96.32:0,96,1342	0/1:17,14:29:99:589,0,437	0/0:20,0:20:54.15:0,54,720	0/0:16,0:16:48.16:0,48,671	0/0:4,0:4:3.01:0,3,42	0/0:39,0:39:99:0,117,1596	0/0:20,0:20:51.17:0,51,711	0/0:39,0:39:99:0,114,1593	0/0:23,0:23:66.21:0,66,906	0/0:24,0:24:72.22:0,72,985	0/0:39,0:39:99:0,114,1590	0/0:37,0:37:99:0,108,1507	0/0:22,0:22:63.19:0,63,862	0/0:8,0:8:24.08:0,24,335	0/0:42,0:42:99:0,123,1720	0/0:17,0:17:42.11:0,42,566	0/0:11,0:11:27.09:0,27,377	0/0:31,0:31:93.31:0,93,1301	0/0:16,0:16:30.10:0,30,419	0/0:17,0:17:51.17:0,51,713	0/0:18,0:17:54.18:0,54,749	0/0:9,0:9:27.09:0,27,377
chr10	65057988	.	GGA	G	101.45	PASS	AB=0.683;AC=1;AF=0.023;AN=44;BaseQRankSum=1.499;DP=780;FS=3.751;HRun=0;HaplotypeScore=53.6194;InbreedingCoeff=-0.0809;MQ=27.20;MQ0=254;MQRankSum=0.211;QD=1.43;ReadPosRankSum=-3.438;VQSLOD=-0.2223;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:30:6.02:0,6,105	0/0:13,0:11:8.87:0,9,157	./.	./.	0/0:17,0:14:18.06:0,18,301	0/0:28,0:20:15.05:0,15,263	./.	0/1:38,33:15:99:174,0,356	0/0:27,0:18:12.04:0,12,210	0/0:20,0:17:48.15:0,48,798	./.	0/0:37,0:27:14.74:0,15,262	0/0:26,0:21:9.50:0,10,157	0/0:45,0:31:14.87:0,15,259	0/0:29,0:20:9.03:0,9,157	0/0:21,0:19:11.81:0,12,210	./.	./.	0/0:21,0:8:21.07:0,21,368	0/0:18,0:13:12.04:0,12,209	0/0:49,0:31:3.01:0,3,53	0/0:30,0:17:24.08:0,24,421	0/0:18,0:14:12.04:0,12,210	0/0:27,0:14:2.57:0,3,52	0/0:24,0:18:15.05:0,15,263	0/0:33,0:17:51.17:0,51,880	0/0:20,0:16:2.62:0,3,53	0/0:11,0:10:3.01:0,3,53
chr10	65058313	.	TG	T	1190.86	PASS	AB=0.695;AC=1;AF=0.018;AN=56;BaseQRankSum=8.838;DP=849;FS=9.034;HRun=1;HaplotypeScore=74.7162;InbreedingCoeff=-0.0300;MQ=44.26;MQ0=15;MQRankSum=-4.051;QD=13.09;ReadPosRankSum=-6.556;VQSLOD=-0.2881;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:59,0:59:57.02:0,57,910	0/0:13,0:13:30.10:0,30,476	0/0:28,0:2:2.94:0,3,48	0/0:22,0:4:12.04:0,12,174	0/0:21,0:20:39.13:0,39,623	0/0:17,0:15:15.05:0,15,240	0/0:29,0:29:39.13:0,39,623	0/1:51,40:88:99:1265,0,1935	0/0:43,0:40:53.86:0,54,862	0/0:35,0:34:96.33:0,96,1532	0/0:12,0:11:27.09:0,27,427	0/0:37,0:37:63.21:0,63,1003	0/0:29,0:29:57.19:0,57,910	0/0:31,0:30:57.19:0,57,910	0/0:26,0:26:42.14:0,42,670	0/0:29,0:29:51.17:0,51,814	0/0:30,0:30:48.16:0,48,767	0/0:33,0:33:72.25:0,72,1151	0/0:27,0:22:66.21:0,66,1032	0/0:21,0:20:48.15:0,48,743	0/0:57,0:56:66.23:0,66,1052	0/0:32,0:31:66.23:0,66,1055	0/0:16,0:16:36.12:0,36,569	0/0:20,0:20:42.14:0,42,668	0/0:26,0:26:57.19:0,57,910	0/0:29,0:29:87.30:0,87,1369	0/0:28,0:28:63.21:0,63,1003	0/0:8,0:7:6.02:0,6,96
chr10	65059593	.	ACAAG	A	1918.42	PASS	AC=2;AF=0.038;AN=52;BaseQRankSum=10.776;DP=783;FS=4.609;HRun=0;HaplotypeScore=135.0566;InbreedingCoeff=0.9998;MQ=71.07;MQ0=4;MQRankSum=-7.865;QD=27.02;ReadPosRankSum=-7.983;VQSLOD=1.0970;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/0:15,0:15:42.08:0,42,1013	0/0:37,0:37:99:0,102,2076	0/0:21,0:22:35.49:0,35,906	0/0:43,0:42:99:0,123,2971	0/0:24,0:24:69.19:0,69,1704	0/0:25,0:24:72.12:0,72,1589	1/1:9,62:64:99:2013,168,0	./.	0/0:32,0:31:96.03:0,96,2004	0/0:30,0:30:87.25:0,87,2108	0/0:25,0:25:75.22:0,75,1840	0/0:40,0:40:99:0,120,2848	0/0:24,0:24:66.20:0,66,1655	0/0:35,0:35:99:0,105,2647	0/0:30,0:29:87.16:0,87,1981	0/0:31,0:29:81.12:0,81,1903	0/0:23,0:23:62.99:0,63,1523	0/0:18,0:18:54.02:0,54,969	0/0:28,0:28:81.27:0,81,2116	0/0:21,0:21:63.20:0,63,1654	0/0:28,0:28:81.22:0,81,1975	0/0:18,0:18:51.16:0,51,1296	0/0:33,0:33:95.77:0,96,2408	0/0:28,0:28:84.22:0,84,2175	0/0:27,0:27:81.24:0,81,1916	0/0:52,0:52:99:0,112,3630	0/0:23,0:23:49.14:0,49,1689
chr10	65060833	.	AACCCCC	A	465.79	PASS	AB=0.947;AC=16;AF=0.615;AN=26;BaseQRankSum=-1.697;DP=400;FS=3.504;HRun=0;HaplotypeScore=47.7107;InbreedingCoeff=0.3952;MQ=43.85;MQ0=144;MQRankSum=-1.857;QD=3.06;ReadPosRankSum=1.403;VQSLOD=1.3391;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:13,0:8:22.92:0,23,413	0/0:18,0:10:22.23:0,22,447	0/0:5,0:4:6.02:0,6,163	./.	./.	./.	./.	./.	./.	1/1:16,14:11:3.01:42,3,0	0/0:11,3:11:9.03:0,9,300	./.	1/1:14,6:12:6.02:100,6,0	./.	1/1:11,1:11:3.01:62,3,0	./.	1/1:6,7:5:11.94:122,12,0	1/1:5,5:8:3.01:38,3,0	1/1:26,2:18:5.99:59,6,0	./.	0/1:4,0:4:29.86:30,0,105	0/1:15,2:14:14.96:15,0,166	./.	./.	1/1:10,8:9:9.03:116,9,0	./.
chr10	65062744	.	A	AG	4269.01	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=1.390;DP=778;FS=1.736;HRun=4;HaplotypeScore=85.1285;InbreedingCoeff=0.9996;MQ=69.41;MQ0=18;MQRankSum=-6.618;QD=26.52;ReadPosRankSum=-0.916;VQSLOD=3.4472;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,42:46:99:1496,108,0	0/0:12,0:12:33.10:0,33,394	0/0:25,0:24:67.08:0,67,785	0/0:28,0:23:44.33:0,44,735	0/0:16,0:16:42.13:0,42,502	0/0:18,0:18:39.12:0,39,467	0/0:32,0:32:93.28:0,93,1113	1/1:25,39:40:99:1273,99,0	1/1:6,42:45:78.37:1500,78,0	0/0:23,0:23:60.18:0,60,719	0/0:18,0:18:51.16:0,51,611	0/0:30,0:28:78.24:0,78,933	0/0:23,0:23:66.20:0,66,791	0/0:30,0:30:84.24:0,84,991	0/0:33,0:33:93.28:0,93,1110	0/0:24,0:24:69.21:0,69,823	0/0:29,0:29:78.24:0,78,934	0/0:40,0:40:99:0,114,1324	0/0:20,0:20:57.16:0,57,673	0/0:15,0:15:36.11:0,36,429	0/0:65,0:65:99:0,172,2027	0/0:23,0:23:63.17:0,63,729	0/0:16,0:16:42.12:0,42,492	0/0:32,0:32:86.84:0,87,1030	0/0:16,0:16:45.14:0,45,538	0/0:20,0:20:60.18:0,60,712	0/0:19,0:19:45.12:0,45,528	0/0:10,0:10:30.09:0,30,360
chr10	65062759	.	CCA	C	533.41	PASS	AB=0.882;AC=2;AF=0.036;AN=56;BaseQRankSum=7.387;DP=757;FS=2.653;HRun=0;HaplotypeScore=113.7588;InbreedingCoeff=-0.0370;MQ=69.03;MQ0=4;MQRankSum=-6.007;QD=4.89;ReadPosRankSum=-2.722;VQSLOD=2.0640;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:45:99:0,126,2462	0/0:12,0:12:36.12:0,36,716	0/0:25,1:25:52.50:0,53,1100	0/0:19,0:19:47.26:0,47,831	0/0:18,0:18:54.16:0,54,1010	0/0:18,0:18:48.05:0,48,860	0/0:34,0:34:99:0,102,1952	0/1:67,0:57:55.94:140,0,56	0/1:29,13:40:99:482,0,1381	0/0:30,0:30:87.25:0,87,1576	0/0:18,0:18:54.19:0,54,1073	0/0:29,0:27:78.22:0,78,1472	0/0:22,0:22:63.20:0,63,1198	0/0:28,0:28:84.28:0,84,1629	0/0:36,0:36:99:0,105,1951	0/0:21,0:21:60.20:0,60,1118	0/0:30,0:30:90.29:0,90,1746	0/0:34,0:34:99:0,102,1996	0/0:17,0:17:48.16:0,48,956	0/0:12,0:12:36.12:0,36,715	0/0:55,0:55:99:0,166,3252	0/0:22,0:22:66.21:0,66,1276	0/0:20,0:20:54.04:0,54,942	0/0:32,0:32:96.31:0,96,1829	0/0:17,0:17:51.17:0,51,983	0/0:24,0:24:72.23:0,72,1340	0/0:15,0:14:45.12:0,45,804	0/0:13,0:13:39.11:0,39,688
chr10	65062760	.	CA	C	1899.75	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=10.110;DP=759;FS=5.128;HRun=2;HaplotypeScore=95.0818;InbreedingCoeff=0.6477;MQ=69.05;MQ0=3;MQRankSum=-8.554;QD=17.75;ReadPosRankSum=-5.497;VQSLOD=2.1080;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:45:99:0,126,1764	0/0:13,0:13:39.12:0,39,548	0/0:25,0:25:62.57:0,63,782	0/0:19,0:19:49.61:0,50,613	0/0:18,0:18:54.16:0,54,752	0/0:18,0:18:48.01:0,48,607	0/0:34,0:34:99:0,99,1377	1/1:7,59:57:99:1931,165,0	0/1:41,0:40:75.26:75,0,975	0/0:31,0:31:90.23:0,90,1174	0/0:18,0:18:54.17:0,54,767	0/0:30,0:28:72.20:0,72,1024	0/0:21,0:21:60.15:0,60,831	0/0:28,0:28:83.47:0,83,1154	0/0:36,0:36:99:0,99,1391	0/0:20,0:20:57.09:0,57,733	0/0:30,0:30:90.19:0,90,1221	0/0:34,0:34:99:0,102,1463	0/0:18,0:18:51.16:0,51,725	0/0:14,0:14:42.12:0,42,575	0/0:55,0:55:99:0,165,2330	0/0:22,0:22:63.21:0,63,913	0/0:19,0:19:54.03:0,54,701	0/0:32,0:32:93.19:0,93,1253	0/0:17,0:17:51.14:0,51,691	0/0:24,0:24:66.21:0,66,933	0/0:15,0:14:42.08:0,42,551	0/0:14,0:14:42.06:0,42,517
chr10	65064026	.	T	TC	1114.48	PASS	AB=0.690;AC=1;AF=0.018;AN=56;BaseQRankSum=7.101;DP=733;FS=33.956;HRun=3;HaplotypeScore=87.7611;InbreedingCoeff=-0.0183;MQ=58.10;MQ0=16;MQRankSum=-4.594;QD=14.29;ReadPosRankSum=-4.882;VQSLOD=0.3559;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,129,1548	0/0:12,0:10:30.09:0,30,360	0/0:23,0:13:35.87:0,36,379	0/0:11,0:10:27.03:0,27,307	0/0:20,0:20:60.17:0,60,707	0/0:18,0:17:45.14:0,45,539	0/0:33,0:31:84.24:0,84,995	0/1:43,35:73:99:1189,0,934	0/0:24,0:22:63.19:0,63,756	0/0:22,0:20:57.16:0,57,670	0/0:19,0:19:54.17:0,54,648	0/0:27,0:26:75.23:0,75,900	0/0:32,0:32:90.26:0,90,1066	0/0:23,0:23:63.16:0,63,722	0/0:27,0:27:78.24:0,78,935	0/0:19,0:19:54.12:0,54,632	0/0:40,0:39:99:0,109,1228	0/0:26,0:26:72.22:0,72,864	0/0:16,0:15:42.13:0,42,504	0/0:18,0:18:48.15:0,48,575	0/0:42,0:42:99:0,117,1387	0/0:18,0:16:42.13:0,42,504	0/0:11,0:11:33.10:0,33,396	0/0:32,0:32:93.22:0,93,1097	0/0:23,0:23:54.16:0,54,648	0/0:29,0:27:78.21:0,78,913	0/0:21,0:20:48.10:0,48,560	0/0:20,0:18:48.15:0,48,576
chr10	65065555	.	GA	G	878.62	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.800;DP=862;FS=55.682;HRun=2;HaplotypeScore=76.5834;InbreedingCoeff=0.9356;MQ=56.08;MQ0=46;MQRankSum=-5.851;QD=25.10;ReadPosRankSum=-2.654;VQSLOD=-0.6312;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,150,2223	0/0:16,0:16:48.07:0,48,667	0/0:29,0:9:24.02:0,24,281	0/0:33,0:11:9.68:0,10,381	0/0:33,0:32:75.25:0,75,1104	0/0:20,0:20:60.19:0,60,871	0/0:26,0:26:66.22:0,66,970	1/1:3,32:28:75.24:973,75,0	0/0:41,0:37:99:0,111,1590	0/0:41,0:40:99:0,117,1736	0/0:11,0:11:33.11:0,33,494	0/0:38,0:38:99:0,114,1680	0/0:30,0:30:90.29:0,90,1325	0/0:35,0:35:99:0,99,1466	0/0:41,0:41:99:0,120,1795	0/0:39,0:39:99:0,117,1753	0/0:36,0:36:99:0,105,1546	0/0:26,0:26:75.25:0,75,1124	0/0:19,0:16:41.91:0,42,593	0/0:26,0:26:60.18:0,60,859	0/0:52,0:51:99:0,144,2138	0/0:21,0:21:60.14:0,60,854	0/0:24,0:24:54.16:0,54,767	0/0:36,0:36:99:0,105,1574	0/0:32,0:32:90.22:0,90,1249	0/0:31,0:31:90.30:0,90,1347	0/0:34,0:34:99:0,99,1461	0/0:5,0:5:15.05:0,15,224
chr10	65066578	.	GGCTGGTTCAT	G	1751.94	PASS	AC=4;AF=0.074;AN=54;BaseQRankSum=7.724;DP=662;FS=4.263;HRun=0;HaplotypeScore=195.1100;InbreedingCoeff=0.9929;MQ=58.83;MQ0=8;MQRankSum=-6.569;QD=44.92;ReadPosRankSum=-1.031;VQSLOD=2.8128;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,144,7150	0/0:15,0:15:45.15:0,45,2303	0/0:27,0:16:42.12:0,42,1669	0/0:21,0:16:16.21:0,16,1697	0/0:20,0:20:60.21:0,60,2995	0/0:26,0:26:78.27:0,78,3983	0/0:30,0:30:87.27:0,87,4264	./.	0/0:27,0:24:69.22:0,69,3360	0/0:21,0:20:60.18:0,60,2708	0/0:16,0:16:42.14:0,42,2029	0/0:30,0:30:81.27:0,81,4177	0/0:22,0:22:66.23:0,66,3449	0/0:23,0:23:69.22:0,69,3456	0/0:24,0:24:72.25:0,72,3748	0/0:15,0:15:45.15:0,45,2402	0/0:34,0:34:99:0,102,5135	0/0:26,0:26:75.26:0,75,3732	0/0:20,0:18:54.18:0,54,2676	0/0:29,0:29:84.29:0,84,4354	0/0:39,0:39:99:0,117,5877	0/0:18,0:17:48.16:0,48,2558	1/1:1,15:16:36.44:1035,36,0	1/1:4,19:23:26.27:837,26,0	0/0:29,0:29:87.30:0,87,4584	0/0:31,0:31:90.29:0,90,4444	0/0:20,0:19:60.19:0,60,2871	0/0:12,0:12:36.12:0,36,1818
chr10	65068431	.	TAC	T	288.45	PASS	AB=0.923;AC=16;AF=0.333;AN=48;BaseQRankSum=2.984;DP=553;FS=2.038;HRun=0;HaplotypeScore=61.0633;InbreedingCoeff=-0.0438;MQ=47.48;MQ0=36;MQRankSum=0.580;QD=1.24;ReadPosRankSum=1.684;VQSLOD=1.4092;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:6,0:6:5.51:0,6,68	./.	./.	0/1:16,2:18:31.65:32,0,115	0/0:12,0:10:6:0,6,68	0/0:18,0:17:9.03:0,9,132	./.	1/1:17,0:16:8.52:42,9,0	0/0:14,0:13:15.02:0,15,153	0/1:11,2:13:35.17:44,0,35	0/0:16,0:16:9:0,9,109	0/0:16,0:16:12.04:0,12,176	0/1:22,2:23:11.13:11,0,201	0/1:17,1:19:25.22:25,0,180	0/0:20,0:18:12.04:0,12,176	0/0:16,0:22:23.91:0,24,211	0/1:11,2:12:20.12:20,0,117	1/1:13,2:10:6:56,6,0	1/1:13,5:17:9.02:95,9,0	0/0:35,0:33:18:0,18,196	0/1:19,0:19:11.87:12,0,87	0/1:12,0:16:8.14:8,0,20	0/1:26,2:28:40.27:40,0,197	0/1:15,2:15:43.24:43,0,198	0/0:16,0:14:11.96:0,12,130	0/0:12,1:11:3.01:0,3,43	0/1:9,0:8:10.91:11,0,216
chr10	65069664	.	A	AC	83.35	PASS	AB=0.700;AC=1;AF=0.018;AN=56;BaseQRankSum=2.893;DP=601;FS=1.837;HRun=0;HaplotypeScore=72.0126;InbreedingCoeff=-0.0211;MQ=50.50;MQ0=40;MQRankSum=-2.003;QD=3.97;ReadPosRankSum=-0.641;VQSLOD=2.6015;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:33:84.28:0,84,1168	0/0:8,0:8:24:0,24,291	0/0:25,0:6:15.04:0,15,193	0/0:22,0:7:16.73:0,17,188	0/0:13,0:13:21.07:0,21,285	0/0:22,0:22:51.16:0,51,693	0/0:33,0:31:81.02:0,81,1029	0/0:40,0:21:54.11:0,54,696	0/1:12,9:20:99:158,0,334	0/0:17,0:15:45.14:0,45,603	0/0:8,0:7:15.05:0,15,209	0/0:20,0:20:54.18:0,54,745	0/0:12,0:12:35.14:0,35,446	0/0:20,0:20:42.12:0,42,545	0/0:22,0:21:45.13:0,45,593	0/0:23,0:20:57.18:0,57,776	0/0:47,0:44:99:0,99,1347	0/0:23,0:23:51.16:0,51,694	0/0:29,0:21:57.15:0,57,746	0/0:13,0:12:36.08:0,36,465	0/0:20,0:19:42.05:0,42,560	0/0:12,0:11:27.09:0,27,375	0/0:14,0:13:36.11:0,36,484	0/0:30,0:30:90.25:0,90,1196	0/0:21,0:18:36.12:0,36,501	0/0:22,0:21:63.21:0,63,876	0/0:24,0:23:60.20:0,60,834	0/0:5,0:5:11.85:0,12,148
chr10	65070355	.	T	TC	347.70	PASS	AB=0.729;AC=1;AF=0.018;AN=56;BaseQRankSum=3.585;DP=699;FS=6.178;HRun=2;HaplotypeScore=78.5515;InbreedingCoeff=-0.0214;MQ=61.78;MQ0=20;MQRankSum=-4.094;QD=8.09;ReadPosRankSum=-3.317;VQSLOD=-0.2701;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:37:99:0,111,1425	0/0:7,0:7:21.07:0,21,267	0/0:12,0:9:17.79:0,18,207	0/0:20,0:15:8.14:0,8,282	0/0:16,0:16:39.13:0,39,501	0/0:26,0:26:75.24:0,75,971	0/0:25,0:25:72.19:0,72,914	0/1:27,16:26:99:422,0,434	0/0:35,0:31:90.28:0,90,1149	0/0:22,0:22:63.13:0,63,781	0/0:16,0:16:45.15:0,45,583	0/0:33,0:33:96.31:0,96,1244	0/0:23,0:23:69.21:0,69,878	0/0:29,0:29:87.28:0,87,1117	0/0:26,0:26:75.24:0,75,969	0/0:20,0:20:60.20:0,60,779	0/0:37,0:37:99:0,111,1422	0/0:31,0:31:90.25:0,90,1147	0/0:26,0:25:69.21:0,69,879	0/0:12,0:11:24.08:0,24,311	0/0:64,0:63:99:0,184,2353	0/0:14,0:14:39.13:0,39,505	0/0:8,0:8:21.07:0,21,265	0/0:41,0:41:99:0,120,1558	0/0:22,0:22:63.19:0,63,804	0/0:20,0:20:60.19:0,60,774	0/0:21,0:20:60.18:0,60,764	0/0:11,0:11:27.09:0,27,350
chr10	65071640	.	G	GA	493.09	PASS	AB=0.667;AC=3;AF=0.054;AN=56;BaseQRankSum=6.752;DP=725;FS=0.000;HRun=3;HaplotypeScore=74.4497;InbreedingCoeff=0.6458;MQ=57.84;MQ0=33;MQRankSum=-6.917;QD=5.36;ReadPosRankSum=0.307;VQSLOD=0.1532;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:36:96.29:0,96,1152	0/0:17,0:17:48.11:0,48,560	0/0:25,0:18:54.14:0,54,616	0/0:25,0:20:55.92:0,56,610	0/0:25,0:25:66.20:0,66,792	0/0:24,0:24:63.18:0,63,744	0/0:24,0:24:69.19:0,69,815	1/1:14,26:19:24.08:332,24,0	0/1:26,26:37:99:267,0,765	0/0:39,0:38:99:0,108,1269	0/0:14,0:14:33.10:0,33,396	0/0:32,0:32:93.29:0,93,1116	0/0:21,0:21:60.17:0,60,709	0/0:16,0:16:48.15:0,48,576	0/0:25,0:25:75.23:0,75,900	0/0:29,0:29:78.24:0,78,936	0/0:32,0:32:90.25:0,90,1065	0/0:30,0:29:84.24:0,84,996	0/0:20,0:18:54.15:0,54,636	0/0:20,0:20:57.16:0,57,673	0/0:25,0:25:69.20:0,69,817	0/0:21,0:21:57.17:0,57,684	0/0:17,0:17:48.13:0,48,564	0/0:24,0:24:63.19:0,63,756	0/0:21,0:21:54.16:0,54,648	0/0:32,0:32:87.27:0,87,1043	0/0:23,0:23:69.21:0,69,828	0/0:14,0:14:42.03:0,42,458
chr10	65072951	.	TG	T	487.39	PASS	AB=0.673;AC=1;AF=0.018;AN=56;BaseQRankSum=7.484;DP=779;FS=0.000;HRun=2;HaplotypeScore=68.1039;InbreedingCoeff=-0.0345;MQ=52.63;MQ0=27;MQRankSum=-5.503;QD=6.96;ReadPosRankSum=-3.583;VQSLOD=-0.5920;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,117,1748	0/0:4,0:4:9.03:0,9,135	0/0:20,0:1:3.01:0,3,32	0/0:18,0:3:8.98:0,9,107	0/0:16,0:16:42.14:0,42,629	0/0:27,0:27:72.23:0,72,1060	0/0:34,0:31:87.25:0,87,1279	0/1:36,34:51:99:562,0,868	0/0:27,8:31:3.49:0,3,1046	0/0:31,0:27:78.26:0,78,1167	0/0:14,0:14:21.07:0,21,313	0/0:31,0:30:84.24:0,84,1234	0/0:29,0:29:78.26:0,78,1169	0/0:34,0:33:90.25:0,90,1304	0/0:21,0:20:60.20:0,60,892	0/0:23,0:23:63.21:0,63,944	0/0:37,0:36:96.31:0,96,1420	0/0:32,0:31:90.30:0,90,1349	0/0:25,0:20:57.16:0,57,811	0/0:24,0:23:57.19:0,57,850	0/0:67,0:66:99:0,175,2585	0/0:22,0:22:48.16:0,48,715	0/0:17,0:17:42.14:0,42,629	0/0:28,0:28:69.70:0,70,1033	0/0:23,0:23:60.20:0,60,897	0/0:30,0:30:90.30:0,90,1330	0/0:15,0:15:45.15:0,45,674	0/0:6,0:6:18.06:0,18,270
chr10	65073235	.	C	CA	9949.57	PASS	AB=0.586;AC=43;AF=0.827;AN=52;BaseQRankSum=5.231;DP=683;FS=11.418;HRun=2;HaplotypeScore=80.1872;InbreedingCoeff=0.7177;MQ=32.72;MQ0=123;MQRankSum=-8.423;QD=18.70;ReadPosRankSum=-0.345;VQSLOD=3.6157;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,30:25:48.16:690,48,0	1/1:1,3:2:3.01:43,3,0	./.	./.	0/0:26,0:23:33.10:0,33,409	1/1:0,13:11:21.07:302,21,0	1/1:3,19:19:32.98:405,33,0	0/1:19,46:58:99:1126,0,285	1/1:2,48:47:75.25:1077,75,0	1/1:2,17:13:36.12:518,36,0	1/1:2,14:13:14.88:123,15,0	1/1:1,35:32:51.17:733,51,0	0/0:31,0:30:69.18:0,69,851	1/1:1,24:21:32.65:474,33,0	1/1:4,32:30:63.15:887,63,0	1/1:0,35:32:66.18:925,66,0	1/1:0,20:9:6.02:86,6,0	1/1:0,19:10:15.05:216,15,0	1/1:2,10:6:18.02:236,18,0	1/1:2,9:5:9.03:129,9,0	1/1:1,22:13:9.03:130,9,0	1/1:2,19:17:20.98:255,21,0	0/0:15,0:11:15.05:0,15,186	0/0:25,0:23:54.17:0,54,669	1/1:3,13:8:9.03:129,9,0	1/1:1,26:25:66.22:949,66,0	1/1:2,20:18:33.06:474,33,0	1/1:1,6:5:3.01:43,3,0
chr10	65073582	.	CCCCCTG	C	47.02	PASS	AB=0.881;AC=2;AF=0.040;AN=50;BaseQRankSum=3.240;DP=395;FS=2.329;HRun=0;HaplotypeScore=50.5557;InbreedingCoeff=0.0952;MQ=30.75;MQ0=125;MQRankSum=1.702;QD=0.92;ReadPosRankSum=-2.556;VQSLOD=1.1735;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:10:9.03:0,9,311	./.	./.	0/0:12,0:1:3.01:0,3,86	0/0:17,0:16:35.80:0,36,1180	0/0:7,0:5:15.01:0,15,411	0/0:10,0:6:12:0,12,331	0/1:33,15:20:99:120,0,455	0/0:17,0:12:26.81:0,27,700	0/0:13,0:10:27.09:0,27,866	0/0:5,0:1:3.01:0,3,104	0/0:18,0:7:15.05:0,15,479	0/0:31,0:25:39.34:0,39,1345	0/0:13,0:10:20.61:0,21,674	0/0:15,0:8:12.04:0,12,390	0/0:11,0:8:12.02:0,12,414	0/0:6,0:5:6.02:0,6,207	0/0:6,0:5:6.02:0,6,207	0/0:10,0:3:6.02:0,6,207	0/0:6,0:5:12.04:0,12,375	./.	0/0:17,0:14:18.06:0,18,603	0/0:15,0:13:15.05:0,15,494	0/0:31,0:24:9.03:0,9,312	0/0:10,0:4:9.03:0,9,310	0/0:13,0:8:24.08:0,24,800	0/0:12,0:7:21.07:0,21,660	0/1:3,0:2:0.10:0,0,0
chr10	65073748	.	T	TG	2997.09	PASS	AC=34;AF=0.773;AN=44;BaseQRankSum=-2.239;DP=447;FS=2.380;HRun=2;HaplotypeScore=36.5825;InbreedingCoeff=0.6216;MQ=21.38;MQ0=228;MQRankSum=-0.296;QD=10.55;ReadPosRankSum=-0.229;VQSLOD=1.4726;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	1/1:1,3:2:6.02:86,6,0	./.	./.	0/0:11,0:10:5.98:0,6,57	./.	0/0:1,15:5:0:0,0,0	1/1:17,35:19:54.12:689,54,0	1/1:4,9:5:2.86:18,3,0	1/1:4,12:8:21.02:271,21,0	1/1:1,8:8:9.03:128,9,0	./.	0/0:19,0:12:15.05:0,15,185	1/1:0,6:2:3.01:36,3,0	1/1:1,8:5:2.96:19,3,0	1/1:2,4:2:2.94:18,3,0	1/1:6,18:7:11.78:74,12,0	1/1:7,20:14:17.97:212,18,0	1/1:4,9:4:12.04:171,12,0	1/1:0,19:19:48.04:619,48,0	1/1:6,46:11:18.04:238,18,0	1/1:0,9:5:3.01:43,3,0	0/0:9,0:8:15:0,15,168	0/0:30,0:19:23.99:0,24,276	1/1:0,14:13:24.08:344,24,0	1/1:0,8:5:9.03:129,9,0	./.	1/1:0,3:1:3.01:43,3,0
chr10	65073750	.	G	GA	1464.61	PASS	AB=1.000;AC=23;AF=0.548;AN=42;BaseQRankSum=-1.004;DP=442;FS=0.000;HRun=0;HaplotypeScore=41.7725;InbreedingCoeff=0.4824;MQ=21.45;MQ0=227;MQRankSum=-3.801;QD=6.31;ReadPosRankSum=3.479;VQSLOD=3.0195;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	1/1:3,0:2:5.98:48,6,0	./.	./.	0/0:10,0:9:6.02:0,6,79	./.	./.	1/1:50,6:20:53.32:463,53,0	0/0:13,0:5:0.89:0,1,2	1/1:14,0:7:18.17:116,18,0	1/1:8,0:7:8.98:73,9,0	./.	0/0:18,0:12:15.05:0,15,208	1/1:7,0:2:2.98:22,3,0	0/0:8,0:4:1.81:0,2,16	0/0:5,0:1:0:0,0,0	0/0:24,0:7:8.63:0,9,53	0/1:25,0:14:3.07:64,0,3	0/1:14,0:5:10.06:62,0,10	1/1:19,0:19:44.83:361,45,0	1/1:52,0:11:14.39:118,14,0	1/1:9,0:5:2.99:24,3,0	0/0:9,0:8:15.01:0,15,187	0/0:31,0:20:32.95:0,33,380	1/1:14,0:13:23.93:190,24,0	0/1:8,0:5:8.08:48,0,8	./.	1/1:3,0:1:2.99:23,3,0
chr10	65073785	.	G	GGT	1873.93	PASS	AB=0.825;AC=25;AF=0.543;AN=46;BaseQRankSum=-4.486;DP=484;FS=2.743;HRun=0;HaplotypeScore=56.1042;InbreedingCoeff=-0.1721;MQ=26.68;MQ0=201;MQRankSum=-2.932;QD=6.25;ReadPosRankSum=0.884;VQSLOD=2.8731;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:14,1:6:0.35:10,0,0	./.	./.	./.	0/0:12,0:11:6.01:0,6,65	./.	0/1:15,8:16:45.58:347,0,46	./.	1/1:9,1:5:8.85:79,9,0	0/1:13,0:9:18.92:19,0,27	1/1:8,1:7:3.01:45,3,0	0/1:5,1:5:35.66:36,0,44	0/0:20,0:17:14.83:0,15,144	0/1:7,5:7:17.68:163,0,18	0/1:3,4:4:23.70:80,0,24	0/1:6,2:4:35.62:36,0,56	0/1:14,11:16:82.98:446,0,83	0/1:23,5:18:65.88:189,0,66	1/1:7,2:5:6.49:91,6,0	0/0:11,0:11:5.74:0,6,47	0/1:53,4:24:56.30:158,0,56	1/1:10,1:8:8.98:105,9,0	0/0:6,0:6:2.52:0,3,25	0/1:31,1:25:3.08:3,0,312	0/0:13,3:13:2.95:0,3,19	1/1:9,2:8:8.52:99,9,0	0/1:9,0:6:63.80:67,0,64	1/1:5,2:3:2.48:44,2,0
chr10	65074040	.	T	TA	11103.59	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=8.321;DP=557;FS=6.470;HRun=6;HaplotypeScore=100.8138;InbreedingCoeff=0.9812;MQ=50.00;MQ0=48;MQRankSum=-0.944;QD=27.90;ReadPosRankSum=1.848;VQSLOD=4.9750;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:9:23.93:0,24,218	1/1:0,5:4:12.04:151,12,0	0/0:15,0:12:25.79:0,26,257	0/0:16,0:11:23.96:0,24,219	0/0:27,0:26:69.15:0,69,699	1/1:3,18:14:42.13:519,42,0	1/1:2,26:28:69.22:868,69,0	1/1:19,36:31:18.41:751,18,0	0/0:35,0:21:57.10:0,57,570	1/1:3,21:22:60.18:733,60,0	1/1:0,19:17:48.15:604,48,0	1/1:0,15:15:42.13:528,42,0	0/0:13,0:13:33.07:0,33,337	1/1:1,12:12:36.12:453,36,0	1/1:0,18:14:42.13:528,42,0	1/1:2,14:14:8.56:422,9,0	1/1:3,13:15:21.95:436,22,0	1/1:2,22:22:60.06:711,60,0	1/1:5,13:13:30.08:365,30,0	1/1:2,17:18:54.17:675,54,0	1/1:0,18:18:45.14:566,45,0	1/1:0,10:9:27.09:339,27,0	0/0:16,0:15:42.10:0,42,428	0/0:26,0:26:78.18:0,78,795	1/1:0,17:17:48.15:604,48,0	1/1:1,25:23:38.60:796,39,0	1/1:4,15:14:36.12:453,36,0	1/1:1,16:16:48.15:603,48,0
chr10	65074055	.	AAAC	A	347.87	PASS	AB=0.800;AC=3;AF=0.054;AN=56;BaseQRankSum=0.203;DP=597;FS=0.000;HRun=0;HaplotypeScore=169.4632;InbreedingCoeff=0.6392;MQ=54.50;MQ0=37;MQRankSum=-4.455;QD=6.69;ReadPosRankSum=-0.158;VQSLOD=3.0089;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,11:9:27.08:316,27,0	0/0:6,0:5:15.05:0,15,368	0/0:19,0:17:46.40:0,46,1053	0/0:12,0:11:29.97:0,30,699	0/0:24,0:24:72.23:0,72,1683	0/0:20,0:17:51.18:0,51,1213	0/0:30,0:29:78.27:0,78,1851	0/0:47,0:20:56.90:0,57,913	0/1:30,10:26:99:137,0,1188	0/0:26,0:26:78.27:0,78,1901	0/0:21,0:20:60.21:0,60,1467	0/0:16,0:16:45.15:0,45,1094	0/0:12,0:12:36.12:0,36,858	0/0:18,0:17:51.13:0,51,1136	0/0:20,0:16:48.16:0,48,1147	0/0:16,0:15:42.14:0,42,1033	0/0:22,0:21:63.22:0,63,1475	0/0:25,0:23:69.24:0,69,1657	0/0:21,0:19:57.20:0,57,1370	0/0:22,0:22:66.22:0,66,1543	0/0:24,0:24:60.21:0,60,1415	0/0:14,0:13:39.13:0,39,935	0/0:14,0:14:42.14:0,42,1009	0/0:31,0:31:93.32:0,93,2200	0/0:20,0:20:57.19:0,57,1364	0/0:29,1:26:35.77:0,36,1719	0/0:16,0:14:45.13:0,45,1055	0/0:18,0:17:51.18:0,51,1256
chr10	65074364	.	AAGAG	A	4278.46	PASS	AB=0.774;AC=43;AF=0.796;AN=54;BaseQRankSum=6.100;DP=627;FS=27.169;HRun=0;HaplotypeScore=112.4614;InbreedingCoeff=0.6521;MQ=60.63;MQ0=27;MQRankSum=-0.858;QD=9.72;ReadPosRankSum=-0.398;VQSLOD=1.9945;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:27:8.96:75,9,0	1/1:5,3:6:9.03:141,9,0	1/1:22,0:12:2.60:10,3,0	./.	0/0:18,0:18:15.05:0,15,325	1/1:9,4:12:3.01:47,3,0	1/1:11,8:18:21.07:328,21,0	0/0:51,0:31:6:0,6,91	0/1:16,0:19:71.97:118,0,72	1/1:20,8:28:24.03:310,24,0	1/1:17,4:18:8.94:87,9,0	1/1:12,6:18:15.05:235,15,0	0/0:26,0:26:33.11:0,33,754	1/1:11,5:15:12.04:188,12,0	1/1:18,4:23:9.02:122,9,0	1/1:6,10:16:24.08:375,24,0	1/1:19,8:26:27.05:420,27,0	1/1:9,9:18:21.07:328,21,0	1/1:9,0:9:3.01:46,3,0	1/1:15,2:13:6.01:75,6,0	1/1:14,4:18:6.02:94,6,0	1/1:14,9:23:27.09:422,27,0	0/0:26,0:26:24.02:0,24,506	0/0:32,0:34:44.58:0,45,821	1/1:8,8:16:12.03:169,12,0	1/1:16,4:20:9.01:110,9,0	1/1:13,12:24:18.05:263,18,0	1/1:10,9:18:11.64:316,12,0
chr10	65074499	.	A	AC	134.97	PASS	AB=0.856;AC=2;AF=0.038;AN=52;BaseQRankSum=3.522;DP=1001;FS=9.693;HRun=0;HaplotypeScore=118.1353;InbreedingCoeff=-0.0383;MQ=48.09;MQ0=118;MQRankSum=-4.589;QD=1.05;ReadPosRankSum=-4.052;VQSLOD=0.0854;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:43,2:35:9.88:10,0,848	0/0:13,0:10:30.10:0,30,414	./.	./.	0/0:29,0:27:78.25:0,78,1067	0/0:24,0:23:60.20:0,60,839	0/0:28,0:28:59.85:0,60,744	0/1:56,27:42:99:208,0,779	0/0:55,0:45:99:0,114,1547	0/0:46,0:43:99:0,120,1678	0/0:11,0:10:21.07:0,21,287	0/0:36,0:36:99:0,105,1450	0/0:38,0:37:99:0,105,1463	0/0:40,0:38:99:0,108,1494	0/0:34,0:32:93.31:0,93,1301	0/0:28,0:26:75.25:0,75,1048	0/0:29,0:25:66.22:0,66,920	0/0:27,0:23:63.17:0,63,858	0/0:16,0:12:36.11:0,36,487	0/0:28,0:27:63.17:0,63,854	0/0:51,0:47:90.21:0,90,1202	0/0:36,0:33:84.18:0,84,1086	0/0:25,0:25:57.18:0,57,796	0/0:47,0:46:98.83:0,99,1362	0/0:20,0:15:39.13:0,39,545	0/0:49,0:48:99:0,141,1926	0/0:52,0:50:99:0,138,1896	0/0:16,0:15:27.07:0,27,360
chr10	65074694	.	A	ATACC	230.32	PASS	AB=0.622;AC=1;AF=0.018;AN=56;BaseQRankSum=-0.266;DP=807;FS=8.887;HRun=0;HaplotypeScore=236.3487;InbreedingCoeff=-0.0183;MQ=53.45;MQ0=4;MQRankSum=-3.337;QD=10.01;ReadPosRankSum=-2.338;VQSLOD=1.0941;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:35:62.52:0,63,1163	0/0:10,0:10:21.04:0,21,383	0/0:46,0:33:89.62:0,90,1682	0/0:28,0:20:53.54:0,54,885	0/0:29,0:29:87.28:0,87,1763	0/0:19,0:19:35.62:0,36,655	0/0:36,0:36:82.10:0,82,1593	0/1:9,13:22:99:305,0,204	0/0:47,0:45:99:0,99,1997	0/0:34,0:34:99:0,101,1956	0/0:17,0:17:45.15:0,45,929	0/0:26,0:26:72.22:0,72,1403	0/0:46,0:46:99:0,132,2574	0/0:23,0:23:60.17:0,60,1152	0/0:29,0:28:72.21:0,72,1410	0/0:29,0:28:75.26:0,75,1540	0/0:28,0:28:72.25:0,72,1506	0/0:25,0:25:69.21:0,69,1351	0/0:15,0:14:39.13:0,39,780	0/0:23,0:23:63.20:0,63,1255	0/0:42,0:41:99:0,105,2144	0/0:30,0:30:63.22:0,63,1305	0/0:31,0:30:81.25:0,81,1584	0/0:35,0:34:93.32:0,93,1904	0/0:20,0:20:48.07:0,48,837	0/0:37,0:37:99:0,111,2156	0/0:31,0:31:78.24:0,78,1538	0/0:12,0:12:36.05:0,36,632
chr10	65074795	.	CTCTCTCTT	C	7722.37	PASS	AB=1.000;AC=40;AF=0.714;AN=56;BaseQRankSum=2.069;DP=599;FS=0.837;HRun=0;HaplotypeScore=169.6574;InbreedingCoeff=0.7359;MQ=60.35;MQ0=59;MQRankSum=-3.016;QD=20.22;ReadPosRankSum=-0.927;VQSLOD=4.2910;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:21:51.47:0,51,410	1/1:7,0:7:14.77:223,15,0	0/0:46,0:12:8.25:0,8,250	0/1:57,0:17:24.83:25,0,153	0/0:17,0:16:41.98:0,42,1236	1/1:14,0:13:27.07:490,27,0	1/1:14,2:16:33.08:594,33,0	0/1:30,0:18:27.06:27,0,189	0/0:29,0:22:21.79:0,22,372	1/1:21,3:18:47.36:581,47,0	1/1:0,5:5:6.02:128,6,0	1/1:14,3:17:25.87:480,26,0	0/0:37,0:36:87.23:0,87,2285	1/1:11,2:10:6.79:179,7,0	1/1:25,4:29:74.04:1173,74,0	1/1:18,4:20:27:654,27,0	1/1:10,2:11:26.98:378,27,0	1/1:12,1:13:29.80:357,30,0	1/1:9,8:14:28.62:555,29,0	1/1:3,11:13:8.93:104,9,0	1/1:16,1:16:21.21:247,21,0	1/1:6,14:17:5.85:75,6,0	0/0:28,0:28:72.07:0,72,1879	0/0:36,0:35:99:0,102,3330	1/1:8,3:7:14.72:290,15,0	1/1:6,11:15:33.95:539,34,0	1/1:16,2:17:30:531,30,0	1/1:8,0:8:5.99:90,6,0
chr10	65074810	.	T	TCG	3670.47	PASS	AB=0.907;AC=29;AF=0.518;AN=56;BaseQRankSum=3.654;DP=549;FS=7.489;HRun=0;HaplotypeScore=146.6246;InbreedingCoeff=0.3495;MQ=63.12;MQ0=43;MQRankSum=-2.515;QD=15.42;ReadPosRankSum=-1.642;VQSLOD=3.0934;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:19:35.39:0,35,274	0/1:2,2:4:4.94:126,0,5	0/0:49,0:16:20.96:0,21,246	0/0:79,0:25:33.64:0,34,264	0/0:16,0:15:39.10:0,39,549	1/1:7,3:10:21.04:284,21,0	1/1:10,4:13:13.43:341,13,0	0/0:20,0:11:17.96:0,18,149	0/0:25,0:21:49.75:0,50,304	0/1:17,2:12:71.35:112,0,71	1/1:6,0:6:6.02:94,6,0	0/1:11,2:13:6.50:227,0,7	0/0:31,0:30:81.18:0,81,1082	0/1:10,0:7:12.77:79,0,13	1/1:15,6:21:36.94:617,37,0	1/1:13,3:14:6.75:334,7,0	1/1:6,2:7:14.41:132,14,0	0/1:10,2:12:2.05:182,0,2	0/1:16,0:12:64.06:141,0,64	1/1:14,0:12:4.69:50,5,0	1/1:12,0:11:10.26:164,10,0	1/1:18,0:14:4.32:48,4,0	0/0:30,0:30:72.12:0,72,940	0/0:38,0:37:99:0,108,1517	0/1:11,2:9:9.61:181,0,10	0/1:14,0:13:16.72:154,0,17	1/1:12,3:15:20.49:369,20,0	0/1:3,0:3:15.35:37,0,15
chr10	65074830	.	GCTCTCTCTCGCT	G	3220.05	PASS	AB=0.857;AC=42;AF=0.750;AN=56;BaseQRankSum=8.965;DP=489;FS=12.643;HRun=0;HaplotypeScore=169.4190;InbreedingCoeff=0.6120;MQ=56.71;MQ0=25;MQRankSum=-8.066;QD=14.19;ReadPosRankSum=-1.729;VQSLOD=1.7616;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:17,7:19:22.93:330,23,0	1/1:1,1:2:5.51:50,6,0	0/0:52,0:16:25.32:0,25,285	0/0:89,0:27:56.19:0,56,724	0/0:24,0:22:57.19:0,57,1829	1/1:7,0:6:4.52:17,5,0	1/1:12,2:10:13:181,13,0	0/1:10,0:3:10.01:18,0,10	1/1:12,3:15:33.08:513,33,0	1/1:7,3:6:11.16:313,11,0	1/1:3,2:5:6:59,6,0	0/1:6,4:9:2.86:144,0,3	0/0:24,0:24:39.77:0,40,1878	1/1:4,3:3:3.01:40,3,0	1/1:9,4:13:23.30:217,23,0	1/1:3,5:6:11.31:78,11,0	1/1:5,2:6:7.47:140,7,0	1/1:8,1:8:11.97:143,12,0	1/1:13,3:12:6.86:474,7,0	1/1:7,1:7:6.02:70,6,0	1/1:5,1:4:3.27:26,3,0	1/1:16,3:13:0.65:3,1,0	0/0:29,0:29:65.53:0,66,2583	0/0:42,0:41:99:0,110,4320	1/1:10,3:7:5.50:40,5,0	1/1:10,2:12:23.53:399,24,0	1/1:9,2:11:17.41:120,17,0	1/1:1,0:1:3:28,3,0
chr10	65074840	.	GCT	G	837.63	PASS	AB=0.812;AC=27;AF=0.519;AN=52;BaseQRankSum=5.338;DP=425;FS=8.864;HRun=0;HaplotypeScore=108.1338;InbreedingCoeff=0.4744;MQ=51.75;MQ0=25;MQRankSum=-6.142;QD=5.27;ReadPosRankSum=1.913;VQSLOD=2.1349;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:16,4:15:2.83:36,3,0	1/1:3,0:2:6:54,6,0	0/0:41,0:13:23.64:0,24,272	0/0:74,0:24:45.13:0,45,530	0/0:25,0:23:52.97:0,53,779	0/0:3,1:3:3.89:0,4,34	1/1:7,6:8:2.47:30,2,0	0/0:14,0:6:5.38:0,5,40	1/1:15,1:15:8.14:68,8,0	0/1:6,5:7:0.22:120,0,0	./.	0/1:7,1:7:18.49:22,0,18	0/0:24,0:24:46.32:0,46,612	./.	0/1:8,0:8:0:0,0,0	0/0:8,1:7:2.15:0,2,7	0/1:6,0:5:1.57:25,0,2	1/1:2,4:5:12:133,12,0	1/1:9,3:9:4.04:205,4,0	1/1:5,0:4:6:54,6,0	1/1:2,3:4:0.44:1,0,0	0/1:9,8:12:0.05:0,0,0	0/0:27,1:28:25.35:0,25,896	0/0:37,0:36:87.50:0,88,1392	0/1:5,6:6:0:0,0,0	1/1:8,2:10:20.51:182,21,0	0/1:5,2:7:2.13:33,0,2	1/1:0,1:1:3:28,3,0
chr10	65074855	.	T	TACAC	509.22	PASS	AB=0.917;AC=14;AF=0.259;AN=54;BaseQRankSum=3.011;DP=401;FS=11.429;HRun=0;HaplotypeScore=120.2223;InbreedingCoeff=0.1449;MQ=49.39;MQ0=20;MQRankSum=-2.946;QD=5.20;ReadPosRankSum=-1.213;VQSLOD=1.7773;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:13:12.66:0,13,81	0/1:6,0:3:4.59:5,0,13	0/0:25,0:11:14.81:0,15,367	0/0:44,0:19:23.60:0,24,520	0/0:22,0:21:59.34:0,59,993	1/1:7,0:6:5.69:64,6,0	0/0:16,0:10:11.47:0,11,68	0/0:22,0:7:18.06:0,18,280	0/0:11,0:12:11.98:0,12,130	0/1:13,1:11:90.32:146,0,90	./.	0/1:8,1:8:49.74:55,0,50	0/0:20,0:19:57.14:0,57,1060	1/1:8,0:4:3.01:32,3,0	0/1:9,1:10:0.02:0,0,1	0/1:7,2:7:20.35:118,0,20	0/1:7,1:6:59.10:59,0,67	0/0:13,0:10:8.64:0,9,65	0/0:9,0:6:17.93:0,18,155	0/0:8,0:7:14.28:0,14,85	0/0:7,0:6:5.52:0,6,25	0/1:15,1:10:16.39:84,0,16	0/0:25,0:25:66.14:0,66,1237	0/0:35,0:34:93.14:0,93,1828	0/0:12,0:6:5.66:0,6,21	0/1:9,0:9:21.63:22,0,144	0/0:11,0:10:14.95:0,15,145	1/1:1,0:1:3.01:69,3,0
chr10	65074857	.	TAC	T	78.11	PASS	AB=0.934;AC=6;AF=0.125;AN=48;BaseQRankSum=-0.229;DP=440;FS=1.179;HRun=0;HaplotypeScore=118.1443;InbreedingCoeff=0.1596;MQ=45.43;MQ0=22;MQRankSum=0.632;QD=0.99;ReadPosRankSum=1.054;VQSLOD=2.3068;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	0/1:7,0:4:0:0,0,0	./.	./.	0/1:18,5:22:94.40:94,0,212	0/0:9,0:9:6:0,6,52	0/0:18,0:12:5.05:0,5,44	0/0:26,0:9:7.26:0,7,75	1/1:11,0:12:6.40:30,6,0	0/0:17,0:12:26.88:0,27,225	./.	0/0:10,0:8:8.05:0,8,73	0/1:19,2:20:52.01:52,0,259	0/0:7,0:6:2.67:0,3,11	0/0:11,0:12:11.70:0,12,135	0/0:10,0:8:8.59:0,9,76	0/0:11,0:8:14.51:0,15,134	0/0:16,0:14:19.30:0,19,236	0/0:11,0:7:5.89:0,6,59	0/0:9,0:8:15.03:0,15,169	0/0:14,0:10:2.84:0,3,43	0/0:14,0:11:5.89:0,6,52	0/0:23,0:24:2.13:0,2,142	0/0:33,1:33:14.86:0,15,571	0/0:13,0:7:0:0,0,0	0/0:10,0:11:20.01:0,20,160	0/1:11,0:12:2.95:3,0,103	0/0:2,0:1:3:0,3,26
chr10	65075274	.	AC	A	350.76	PASS	AB=0.638;AC=1;AF=0.019;AN=52;BaseQRankSum=4.892;DP=699;FS=2.394;HRun=2;HaplotypeScore=60.2916;InbreedingCoeff=-0.0204;MQ=49.17;MQ0=63;MQRankSum=1.316;QD=9.48;ReadPosRankSum=1.740;VQSLOD=1.5725;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:66,0:64:99:0,184,2689	0/0:12,0:9:18.06:0,18,261	./.	./.	0/0:13,0:13:33.11:0,33,495	0/0:18,0:17:39.13:0,39,584	0/0:28,0:25:72.20:0,72,1030	0/0:34,0:14:36.12:0,36,521	0/1:16,21:32:99:425,0,544	0/0:28,0:22:57.18:0,57,830	0/0:14,0:13:27.09:0,27,404	0/0:30,0:28:68.85:0,69,981	0/0:24,0:21:63.21:0,63,929	0/0:17,0:16:36.12:0,36,536	0/0:18,0:15:33.11:0,33,494	0/0:15,0:14:36.10:0,36,502	0/0:36,0:36:99:0,105,1556	0/0:31,0:31:90.26:0,90,1282	0/0:19,0:15:39.12:0,39,559	0/0:17,0:16:42.14:0,42,629	0/0:67,0:65:99:0,165,2420	0/0:17,0:15:30.05:0,30,406	0/0:22,0:22:54.16:0,54,760	0/0:35,0:35:99:0,105,1566	0/0:16,0:14:27.09:0,27,402	0/0:23,0:23:69.19:0,69,988	0/0:15,0:13:33.11:0,33,491	0/0:8,0:8:18.06:0,18,270
chr10	65075470	.	G	GC	2449.78	PASS	AC=36;AF=0.667;AN=54;BaseQRankSum=11.539;DP=502;FS=0.920;HRun=0;HaplotypeScore=83.1416;InbreedingCoeff=0.8266;MQ=41.43;MQ0=80;MQRankSum=-7.058;QD=9.80;ReadPosRankSum=-0.105;VQSLOD=3.7978;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:12:0.59:0,1,77	./.	0/0:16,0:1:3.01:0,3,42	0/0:26,0:4:8.87:0,9,78	0/0:27,0:26:60.16:0,60,813	1/1:14,4:14:37.57:374,38,0	1/1:7,9:11:31.07:149,31,0	0/0:63,0:31:84.27:0,84,1147	0/0:23,0:15:28.85:0,29,263	1/1:6,6:5:8.88:76,9,0	1/1:3,3:3:4.08:23,4,0	1/1:11,9:11:25.73:140,26,0	0/0:22,0:22:63.21:0,63,878	1/1:10,6:12:25.33:137,25,0	1/1:11,11:12:32.09:273,32,0	1/1:11,3:10:25.96:159,26,0	1/1:9,10:17:40.75:218,41,0	1/1:10,5:9:14.77:111,15,0	1/1:5,4:6:17.70:113,18,0	1/1:5,4:4:5.81:34,6,0	1/1:11,7:15:42.77:278,43,0	1/1:6,9:8:14.09:68,14,0	0/0:18,0:18:45.15:0,45,628	0/0:38,0:37:99:0,111,1551	1/1:11,1:5:5.84:42,6,0	1/1:10,4:12:34.23:229,34,0	1/1:7,4:10:26.28:194,26,0	1/1:3,1:3:4.24:27,4,0
chr10	65075473	.	TG	T	1659.35	PASS	AB=0.889;AC=37;AF=0.661;AN=56;BaseQRankSum=11.984;DP=502;FS=1.997;HRun=1;HaplotypeScore=85.7226;InbreedingCoeff=0.6817;MQ=41.02;MQ0=88;MQRankSum=-7.852;QD=5.74;ReadPosRankSum=-1.676;VQSLOD=-0.1012;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:17,0:13:6.45:16,0,6	1/1:2,1:1:3.01:38,3,0	0/0:16,0:1:2.98:0,3,22	0/0:25,0:3:8.85:0,9,70	0/0:28,0:27:63.21:0,63,979	1/1:13,4:13:28.17:167,28,0	1/1:7,9:11:25.45:85,25,0	0/0:62,0:31:84.29:0,84,1342	0/1:21,0:13:6.35:6,0,116	1/1:6,6:5:8.45:58,8,0	0/1:3,3:3:0.20:8,0,0	1/1:10,9:10:19.05:69,19,0	0/0:22,0:22:63.21:0,63,1003	1/1:10,6:12:23.56:120,24,0	1/1:12,11:13:32.44:246,32,0	1/1:11,3:10:19.64:87,20,0	1/1:9,10:17:27.38:100,27,0	1/1:10,5:9:16.70:98,17,0	1/1:9,4:8:22.69:154,23,0	1/1:4,4:3:2.37:8,2,0	1/1:9,8:14:33.73:124,34,0	1/1:5,9:7:14.44:58,14,0	0/0:17,0:17:48.16:0,48,762	0/0:39,0:38:99:0,114,1820	1/1:10,2:5:6.27:47,6,0	1/1:12,4:13:32.94:198,33,0	1/1:7,4:10:25.45:160,25,0	0/0:3,1:3:0.21:0,0,0
chr10	65075531	.	A	AC	602.66	PASS	AB=0.708;AC=1;AF=0.018;AN=56;BaseQRankSum=-0.633;DP=592;FS=22.404;HRun=0;HaplotypeScore=70.7769;InbreedingCoeff=-0.0278;MQ=44.25;MQ0=83;MQRankSum=-5.100;QD=7.53;ReadPosRankSum=-3.419;VQSLOD=0.8015;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:23:53.81:0,54,751	0/0:11,0:10:27.09:0,27,377	0/0:23,0:2:6.01:0,6,69	0/0:15,0:3:6.01:0,6,71	0/0:25,0:24:63.21:0,63,879	0/0:11,0:8:21.07:0,21,293	0/0:28,0:21:51.13:0,51,689	0/1:47,33:50:99:677,0,987	0/0:22,0:17:36.12:0,36,503	0/0:24,0:17:48.16:0,48,671	0/0:11,0:10:21.07:0,21,293	0/0:24,0:16:27.09:0,27,377	0/0:17,0:17:51.14:0,51,674	0/0:16,0:13:30.10:0,30,418	0/0:27,0:19:36.12:0,36,502	0/0:18,0:11:17.81:0,18,251	0/0:20,0:20:45.15:0,45,628	0/0:15,0:13:30.06:0,30,397	0/0:13,0:7:18.06:0,18,251	0/0:16,0:13:27.07:0,27,359	0/0:23,0:20:48.16:0,48,670	0/0:16,0:11:24.08:0,24,335	0/0:16,0:16:45.15:0,45,628	0/0:43,0:43:99:0,129,1769	0/0:9,0:7:21.07:0,21,292	0/0:23,0:19:57.19:0,57,796	0/0:11,0:8:15.05:0,15,209	0/0:9,0:9:17.81:0,18,251
chr10	65075824	.	CTT	C	195.45	PASS	AB=0.675;AC=1;AF=0.019;AN=52;BaseQRankSum=-1.936;DP=805;FS=6.984;HRun=3;HaplotypeScore=89.4204;InbreedingCoeff=-0.0312;MQ=29.90;MQ0=267;MQRankSum=0.907;QD=3.49;ReadPosRankSum=1.452;VQSLOD=-0.7199;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:14:12.04:0,12,231	0/0:6,0:5:5.80:0,6,83	./.	./.	0/0:34,0:33:44.79:0,45,551	0/0:24,0:21:27.08:0,27,470	0/0:34,0:17:36.04:0,36,616	0/0:64,0:14:30.09:0,30,545	0/1:29,27:43:99:269,0,520	0/0:18,0:15:42.14:0,42,783	0/0:11,0:9:15.05:0,15,251	0/0:35,0:29:41.93:0,42,697	0/0:32,0:27:35.74:0,36,641	0/0:32,0:24:23.80:0,24,462	0/0:43,0:35:45.11:0,45,813	0/0:20,0:17:32.41:0,32,610	0/0:39,0:23:30.06:0,30,481	0/0:28,0:19:18.02:0,18,261	0/0:19,0:7:21.07:0,21,404	0/0:21,0:18:39.05:0,39,639	0/0:68,0:28:30.05:0,30,461	0/0:15,0:11:20.91:0,21,404	0/0:21,0:19:32.76:0,33,558	0/0:30,0:21:15.05:0,15,289	0/0:26,0:21:36.54:0,37,591	0/0:29,0:19:57.13:0,57,1003	0/0:17,0:14:26.85:0,27,477	0/0:4,0:3:6.02:0,6,116
chr10	65076258	.	AG	A	677.36	PASS	AB=0.740;AC=1;AF=0.018;AN=56;BaseQRankSum=4.642;DP=767;FS=0.778;HRun=1;HaplotypeScore=102.4080;InbreedingCoeff=-0.0191;MQ=62.21;MQ0=24;MQRankSum=-4.343;QD=8.80;ReadPosRankSum=-2.198;VQSLOD=0.2880;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,132,2020	0/0:15,0:15:42.10:0,42,639	0/0:27,0:16:48.04:0,48,634	0/0:25,0:18:23.34:0,23,571	0/0:25,0:25:69.21:0,69,1054	0/0:13,0:13:36.05:0,36,545	0/0:28,0:27:81.18:0,81,1217	0/1:50,27:52:99:752,0,946	0/0:34,0:30:90.27:0,90,1386	0/0:30,0:28:81.26:0,81,1254	0/0:10,0:7:18.06:0,18,287	0/0:24,0:24:72:0,72,1007	0/0:14,0:14:42.06:0,42,616	0/0:23,0:23:69.19:0,69,1025	0/0:25,0:25:75.26:0,75,1197	0/0:23,0:23:69.15:0,69,1025	0/0:35,0:35:99:0,105,1548	0/0:21,0:21:63.20:0,63,982	0/0:29,0:22:66.10:0,66,972	0/0:14,0:12:36.10:0,36,544	0/0:48,0:48:99:0,144,2202	0/0:24,0:24:69.13:0,69,1044	0/0:32,0:32:96.28:0,96,1496	0/0:34,0:34:99:0,102,1547	0/0:37,0:36:92.32:0,92,1389	0/0:33,0:32:96.32:0,96,1511	0/0:16,0:15:42.14:0,42,668	0/0:5,0:5:15.05:0,15,239
chr10	65076562	.	G	GA	6255.38	PASS	AB=0.696;AC=38;AF=0.679;AN=56;BaseQRankSum=5.426;DP=629;FS=0.879;HRun=9;HaplotypeScore=125.8261;InbreedingCoeff=0.5692;MQ=47.08;MQ0=25;MQRankSum=-7.155;QD=13.39;ReadPosRankSum=0.142;VQSLOD=4.0514;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:18,15:20:27.03:285,27,0	0/1:6,7:13:4.93:164,0,5	0/0:31,0:10:11.16:0,11,121	0/1:46,1:9:1.28:1,0,72	0/0:23,1:24:23.83:0,24,436	1/1:4,12:14:36.01:368,36,0	0/1:5,11:16:16.54:202,0,17	0/0:26,0:20:34.56:0,35,228	0/1:22,13:29:14.47:444,0,14	1/1:17,11:21:29.99:297,30,0	0/1:3,9:9:5.01:165,0,5	0/1:10,10:17:19.57:222,0,20	0/0:25,0:25:53.95:0,54,463	1/1:10,10:19:35.97:358,36,0	1/1:3,13:12:33.04:345,33,0	1/1:6,4:10:13.25:123,13,0	1/1:13,14:24:37.87:449,38,0	1/1:7,8:11:21.06:232,21,0	1/1:6,6:10:15.04:165,15,0	1/1:10,17:23:21.98:446,22,0	1/1:10,7:15:27.01:275,27,0	1/1:10,10:20:27.07:299,27,0	0/0:27,0:27:61.10:0,61,543	0/0:29,0:29:70.79:0,71,604	1/1:13,15:28:51.41:502,51,0	1/1:11,18:23:41.91:432,42,0	1/1:4,12:13:33.05:350,33,0	1/1:1,4:5:12.03:133,12,0
chr10	65076595	.	AAC	A	6601.81	PASS	AB=0.993;AC=44;AF=0.786;AN=56;BaseQRankSum=12.757;DP=600;FS=18.730;HRun=0;HaplotypeScore=159.1553;InbreedingCoeff=0.7890;MQ=53.14;MQ0=22;MQRankSum=-9.635;QD=14.05;ReadPosRankSum=0.528;VQSLOD=3.6860;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:15,16:20:51.53:444,52,0	1/1:11,0:11:25.88:168,26,0	0/0:41,0:16:37.34:0,37,464	0/1:65,1:16:18.83:19,0,126	0/0:19,0:19:51.17:0,51,892	1/1:19,2:20:51.40:343,51,0	1/1:15,1:16:32.36:269,32,0	1/1:30,0:22:42.46:288,42,0	1/1:15,8:20:56.91:574,57,0	1/1:22,1:16:35.68:325,36,0	1/1:11,3:14:34.53:316,35,0	1/1:12,1:11:22.49:185,22,0	0/0:15,0:15:45.15:0,45,822	1/1:12,2:14:32.25:251,32,0	1/1:11,3:12:33.22:275,33,0	1/1:9,2:10:26.45:200,26,0	1/1:20,3:19:49.36:356,49,0	0/1:14,0:12:8.33:144,0,8	1/1:16,3:14:35.88:285,36,0	1/1:25,2:21:53.57:426,54,0	1/1:21,1:20:34.88:304,35,0	1/1:14,3:16:41.60:357,42,0	0/0:26,0:26:72.19:0,72,1198	0/0:29,0:29:79.49:0,79,1300	1/1:22,1:23:65.01:458,65,0	1/1:17,3:14:40.85:284,41,0	1/1:12,2:14:23.54:258,24,0	1/1:3,1:4:8.91:72,9,0
chr10	65076596	.	AC	A	8524.25	PASS	AB=0.912;AC=44;AF=0.786;AN=56;BaseQRankSum=12.936;DP=587;FS=16.163;HRun=1;HaplotypeScore=143.6797;InbreedingCoeff=0.7835;MQ=52.67;MQ0=21;MQRankSum=-10.110;QD=18.49;ReadPosRankSum=0.053;VQSLOD=3.6479;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:25,6:20:52.38:540,52,0	1/1:10,1:11:26.97:260,27,0	0/0:39,0:16:25.58:0,26,342	0/1:63,0:15:12.52:13,0,109	0/0:19,0:19:51.16:0,51,724	1/1:17,2:19:53.82:455,54,0	1/1:8,8:16:33.02:359,33,0	1/1:25,5:22:48.11:274,48,0	1/1:15,7:20:57.17:707,57,0	1/1:20,3:17:30.34:418,30,0	1/1:11,3:14:33.39:371,33,0	1/1:7,6:11:28.82:306,29,0	0/0:15,0:15:45.15:0,45,657	1/1:10,4:14:32.76:341,33,0	1/1:13,2:13:34.21:297,34,0	1/1:10,1:10:26.98:270,27,0	1/1:19,2:18:50.50:442,51,0	0/1:11,3:12:19.18:218,0,19	1/1:16,3:14:37.57:378,38,0	1/1:19,6:21:53.09:557,53,0	1/1:22,0:21:44.36:410,44,0	1/1:14,2:15:42.02:433,42,0	0/0:25,0:25:72.19:0,72,1007	0/0:28,0:28:80.69:0,81,1083	1/1:16,7:23:68.87:694,69,0	1/1:17,2:14:41.93:368,42,0	1/1:12,2:14:24.95:333,25,0	1/1:4,0:4:8.99:80,9,0
chr10	65076599	.	A	ACC	11980.22	PASS	AB=0.625;AC=41;AF=0.732;AN=56;BaseQRankSum=7.468;DP=597;FS=5.494;HRun=0;HaplotypeScore=144.5760;InbreedingCoeff=0.8975;MQ=55.13;MQ0=20;MQRankSum=-9.173;QD=31.61;ReadPosRankSum=1.707;VQSLOD=6.5019;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:27,1:19:45.55:443,46,0	1/1:2,9:11:24.96:480,25,0	0/0:38,0:18:42.42:0,42,529	0/0:61,0:15:28.14:0,28,314	0/0:21,0:21:54.16:0,54,833	1/1:7,13:19:47.37:874,47,0	1/1:10,4:14:32.33:464,32,0	0/0:31,0:22:43.65:0,44,373	1/1:16,0:20:56.94:638,57,0	1/1:10,15:19:50.59:776,51,0	1/1:7,5:15:34.80:439,35,0	1/1:9,3:10:23.44:258,23,0	0/0:15,0:15:45.15:0,45,734	1/1:8,4:14:32.78:402,33,0	1/1:11,5:14:35.54:511,36,0	1/1:5,7:11:23.66:408,24,0	1/1:12,9:20:47.70:779,48,0	0/1:6,9:13:46.81:360,0,47	1/1:13,6:14:35.36:516,35,0	1/1:15,10:20:55.39:761,55,0	1/1:11,10:21:53.97:938,54,0	1/1:9,8:16:36.58:572,37,0	0/0:25,0:25:75.24:0,75,1199	0/0:27,0:27:78.24:0,78,1225	1/1:9,15:26:68.47:991,68,0	1/1:10,13:18:26.50:671,26,0	1/1:7,5:13:26.89:554,27,0	1/1:1,3:4:9.01:145,9,0
chr10	65076600	.	AAC	A	5598.37	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=7.592;DP=593;FS=2.207;HRun=0;HaplotypeScore=160.9793;InbreedingCoeff=0.8576;MQ=55.19;MQ0=20;MQRankSum=-7.185;QD=14.73;ReadPosRankSum=2.382;VQSLOD=4.7029;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:29,1:19:29.88:338,30,0	1/1:10,1:11:11.12:163,11,0	0/0:38,0:18:27.87:0,28,334	0/0:59,0:15:17.75:0,18,192	0/0:20,0:20:54.12:0,54,734	1/1:18,2:19:32.23:365,32,0	1/1:12,2:14:7.80:154,8,0	0/0:30,0:21:32.92:0,33,280	1/1:22,0:20:28.61:338,29,0	1/1:22,3:19:40.71:419,41,0	1/1:15,0:15:22.83:215,23,0	1/1:11,1:10:3.18:80,3,0	0/0:15,0:15:45.13:0,45,716	1/1:13,2:15:14.76:184,15,0	1/1:11,5:14:14.63:277,15,0	1/1:12,0:11:18.33:229,18,0	1/1:22,1:20:44.59:391,45,0	1/1:14,1:13:5.23:176,5,0	1/1:14,5:14:12.17:220,12,0	1/1:22,3:20:8.27:331,8,0	1/1:17,5:21:53.29:524,53,0	1/1:18,0:16:34.28:324,34,0	0/0:25,0:25:75.21:0,75,1059	0/0:25,0:25:69.12:0,69,1006	1/1:25,1:26:1.46:278,1,0	1/1:23,0:18:43.12:317,43,0	1/1:10,3:13:23.95:212,24,0	1/1:4,0:4:8.85:63,9,0
chr10	65076601	.	AC	A	6230.74	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=8.662;DP=590;FS=3.467;HRun=1;HaplotypeScore=151.3576;InbreedingCoeff=0.9658;MQ=55.42;MQ0=18;MQRankSum=-8.413;QD=16.27;ReadPosRankSum=0.568;VQSLOD=5.0769;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:19:38.66:301,39,0	1/1:11,0:11:25.14:203,25,0	0/0:36,1:18:14.83:0,15,318	0/0:54,2:15:13.74:0,14,153	0/0:20,0:20:54.06:0,54,606	1/1:17,1:17:38.13:365,38,0	1/1:14,0:14:23.68:176,24,0	0/0:27,1:19:42.97:0,43,320	1/1:22,1:21:45.41:388,45,0	1/1:23,2:19:49.13:449,49,0	1/1:14,1:15:35.99:256,36,0	1/1:11,1:10:19.43:111,19,0	0/0:15,0:15:45.12:0,45,561	1/1:16,0:16:33.96:240,34,0	1/1:16,0:14:15.27:266,15,0	1/1:13,0:12:30.41:271,30,0	1/1:20,3:20:44.74:387,45,0	1/1:15,0:13:8.53:163,9,0	1/1:17,1:13:23.36:253,23,0	1/1:20,4:19:36.80:367,37,0	1/1:22,2:23:50.96:516,51,0	1/1:17,1:16:34.73:351,35,0	0/0:25,0:25:75.16:0,75,892	0/0:26,0:26:72.10:0,72,876	1/1:27,0:27:50.68:413,51,0	1/1:22,1:18:51.22:388,51,0	1/1:13,1:14:37.35:298,37,0	1/1:4,0:4:8.95:69,9,0
chr10	65076602	.	C	CCAA	8783.07	PASS	AB=1.000;AC=42;AF=0.750;AN=56;BaseQRankSum=10.387;DP=596;FS=9.143;HRun=0;HaplotypeScore=160.2701;InbreedingCoeff=0.8028;MQ=55.33;MQ0=17;MQRankSum=-8.946;QD=21.22;ReadPosRankSum=-0.472;VQSLOD=4.2566;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:16,13:20:45.54:686,46,0	1/1:11,0:11:22.65:240,23,0	0/0:37,0:20:43.45:0,43,492	0/0:56,0:15:22.70:0,23,233	0/0:21,0:21:54.12:0,54,854	1/1:18,0:17:47.85:433,48,0	1/1:14,0:14:32.45:287,32,0	0/1:27,0:18:21.27:72,0,21	1/1:16,9:22:59.04:811,59,0	1/1:26,1:21:51.31:574,51,0	1/1:13,2:15:41.01:414,41,0	1/1:11,0:9:16.77:150,17,0	0/0:16,0:16:45.12:0,45,798	1/1:14,2:16:38.56:421,39,0	1/1:13,1:12:32.73:324,33,0	1/1:11,2:12:29.33:292,29,0	1/1:19,3:19:45.93:520,46,0	0/1:15,0:13:11.76:196,0,12	1/1:16,2:13:35.76:388,36,0	1/1:23,0:18:51.17:420,51,0	1/1:23,0:23:51.06:541,51,0	1/1:15,3:16:40.70:510,41,0	0/0:24,0:24:72.21:0,72,1226	0/0:27,0:27:72.15:0,72,1227	1/1:27,1:28:70.81:638,71,0	1/1:22,2:19:30.48:397,30,0	1/1:15,1:16:35.84:362,36,0	1/1:3,0:4:9.02:105,9,0
chr10	65076994	.	T	TA	6188.27	PASS	AB=0.797;AC=43;AF=0.768;AN=56;BaseQRankSum=-5.779;DP=729;FS=23.688;HRun=13;HaplotypeScore=89.5175;InbreedingCoeff=0.3301;MQ=63.58;MQ0=3;MQRankSum=-0.763;QD=9.35;ReadPosRankSum=-1.212;VQSLOD=1.8590;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,2:25:26.78:158,27,0	1/1:2,7:10:17.80:143,18,0	0/1:20,0:17:10.23:10,0,53	0/0:10,0:7:4.46:0,4,22	0/0:27,0:29:41.67:0,42,273	1/1:2,13:14:6.45:202,6,0	1/1:4,20:27:29.99:385,30,0	1/1:40,5:45:54.71:452,55,0	0/1:19,0:41:37.10:88,0,37	1/1:14,15:29:36.93:336,37,0	1/1:7,10:17:6.37:149,6,0	1/1:20,13:33:35.45:463,35,0	0/1:15,1:18:3.07:3,0,110	0/1:7,17:24:4.29:234,0,4	1/1:4,31:36:50.93:461,51,0	1/1:7,18:26:1.03:260,1,0	1/1:8,25:33:60.06:556,60,0	0/1:4,21:25:2.06:263,0,2	1/1:9,11:20:18.65:245,19,0	0/1:11,8:18:5.58:80,0,6	1/1:8,13:21:18.02:167,18,0	1/1:11,19:29:26.28:331,26,0	0/1:20,2:23:9.14:9,0,222	0/0:26,0:27:70.40:0,70,475	1/1:8,20:29:44.85:393,45,0	1/1:13,8:23:19.85:267,20,0	1/1:5,27:32:30.46:421,30,0	1/1:1,10:11:12.01:111,12,0
chr10	65077629	.	AAAGG	A	5832.78	PASS	AC=42;AF=0.778;AN=54;BaseQRankSum=9.253;DP=456;FS=6.983;HRun=0;HaplotypeScore=91.9115;InbreedingCoeff=0.7571;MQ=52.66;MQ0=27;MQRankSum=-8.429;QD=19.84;ReadPosRankSum=-0.021;VQSLOD=3.5508;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,6:8:12.04:207,12,0	1/1:1,6:6:15.05:261,15,0	0/0:31,0:21:39.10:0,39,800	0/0:19,0:16:16.35:0,16,607	0/0:32,0:32:93.32:0,93,2248	1/1:3,4:7:9.03:156,9,0	1/1:6,9:15:12.04:207,12,0	1/1:49,25:44:75.17:1109,75,0	1/1:5,17:19:36.12:624,36,0	1/1:8,7:15:18.06:305,18,0	1/1:2,9:8:15.01:226,15,0	1/1:2,2:4:6.02:104,6,0	0/0:26,0:26:72.23:0,72,1674	1/1:2,3:5:3.01:52,3,0	1/1:8,3:11:3.01:52,3,0	1/1:4,0:4:2.98:22,3,0	1/1:3,8:11:6.02:103,6,0	1/1:4,3:6:6.02:104,6,0	1/1:8,2:10:6.02:104,6,0	1/1:2,18:16:39.13:630,39,0	1/1:3,5:8:9.03:156,9,0	1/1:3,17:16:30.10:491,30,0	0/0:21,0:21:57.20:0,57,1445	0/0:30,0:30:75.24:0,75,1781	1/1:2,7:9:21.07:365,21,0	1/1:5,13:16:36.08:503,36,0	./.	1/1:1,3:3:3.01:52,3,0
chr10	65077709	.	A	AAGGTATAT	4013.30	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=2.454;DP=521;FS=28.657;HRun=0;HaplotypeScore=149.1209;InbreedingCoeff=0.9591;MQ=69.24;MQ0=3;MQRankSum=-8.385;QD=53.51;ReadPosRankSum=-4.373;VQSLOD=1.2712;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,13:13:30.06:1222,30,0	0/0:5,0:5:12.04:0,12,344	0/0:12,0:10:30.10:0,30,854	0/0:27,0:27:69.23:0,69,1867	0/0:21,0:21:60.21:0,60,1710	0/0:14,0:12:27.09:0,27,775	0/0:12,0:11:30.10:0,30,772	1/1:26,0:29:66.14:1744,66,0	1/1:6,9:12:27.05:1047,27,0	0/0:21,0:18:42.11:0,42,1205	0/0:13,0:13:12.04:0,12,315	0/0:18,0:16:39.13:0,39,1087	0/0:20,0:20:60.21:0,60,1722	0/0:14,0:8:12.04:0,12,344	0/0:16,0:11:24.08:0,24,658	0/0:17,0:14:18.06:0,18,516	0/0:13,0:11:21.07:0,21,602	0/0:11,0:9:24.08:0,24,689	0/0:12,0:9:27.08:0,27,713	0/0:17,0:16:33.11:0,33,947	0/0:35,0:35:96.29:0,96,2309	0/0:19,0:17:39.13:0,39,1004	0/0:11,0:11:33.11:0,33,908	0/0:46,0:46:99:0,135,3802	0/0:26,0:26:63.22:0,63,1777	0/0:22,0:19:51.12:0,51,1397	0/0:15,0:15:30.10:0,30,861	0/0:8,0:7:21.07:0,21,603
chr10	65077786	.	AAAAC	A	2557.91	PASS	AB=1.000;AC=37;AF=0.685;AN=54;BaseQRankSum=8.332;DP=488;FS=12.295;HRun=0;HaplotypeScore=89.5390;InbreedingCoeff=0.6771;MQ=52.88;MQ0=35;MQRankSum=-6.110;QD=11.42;ReadPosRankSum=1.032;VQSLOD=1.6366;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,123,2958	./.	0/0:22,0:8:14.81:0,15,184	0/0:36,0:13:34.31:0,34,755	0/0:37,0:37:84.29:0,84,1985	1/1:2,3:4:3.01:36,3,0	1/1:2,5:6:3.01:36,3,0	0/1:51,0:35:99:109,0,1450	0/0:34,5:32:93.32:0,93,2187	1/1:1,13:11:27.09:462,27,0	1/1:4,5:7:10.19:161,10,0	1/1:3,5:6:9.03:156,9,0	0/0:29,0:29:78.27:0,78,1973	1/1:2,5:4:9.03:148,9,0	1/1:4,10:9:15.05:243,15,0	1/1:3,8:6:3.01:52,3,0	1/1:1,7:7:9.03:141,9,0	1/1:3,2:3:3.01:52,3,0	1/1:3,2:2:3.01:46,3,0	1/1:3,10:12:24.08:320,24,0	1/1:10,9:18:11.99:126,12,0	1/1:5,11:14:12.04:192,12,0	0/0:15,0:14:36.12:0,36,884	0/0:40,0:40:99:0,111,2605	1/1:3,6:7:6.02:104,6,0	1/1:5,8:9:12.04:209,12,0	1/1:3,4:5:3.01:52,3,0	1/1:1,2:3:6.02:104,6,0
chr10	65077988	.	A	AG	2627.67	PASS	AB=0.763;AC=39;AF=0.696;AN=56;BaseQRankSum=13.219;DP=395;FS=36.658;HRun=0;HaplotypeScore=93.6233;InbreedingCoeff=0.7745;MQ=60.47;MQ0=23;MQRankSum=-8.869;QD=13.98;ReadPosRankSum=-0.889;VQSLOD=1.9439;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,102,1421	1/1:0,1:1:3:28,3,0	0/0:14,0:10:3.51:0,4,319	0/0:26,0:12:26.41:0,26,309	0/0:31,0:30:90.27:0,90,1237	1/1:3,6:5:8.94:96,9,0	1/1:5,7:12:26.98:237,27,0	0/1:31,14:24:99:346,0,206	0/0:27,1:20:51.14:0,51,676	1/1:0,10:8:17.98:162,18,0	1/1:0,5:5:15.01:136,15,0	1/1:0,11:9:23.99:211,24,0	0/0:23,0:23:69.23:0,69,964	1/1:1,4:3:9:80,9,0	1/1:1,11:8:15.01:137,15,0	1/1:3,6:5:12:105,12,0	1/1:0,5:5:15.01:137,15,0	1/1:2,4:3:9.01:84,9,0	1/1:2,2:2:6.01:72,6,0	1/1:1,4:6:8.98:78,9,0	1/1:1,3:4:8.95:78,9,0	1/1:4,9:13:32.51:302,33,0	0/0:20,0:20:51.17:0,51,712	0/0:26,0:26:78.24:0,78,1072	1/1:1,6:6:12:106,12,0	1/1:2,11:8:21.03:201,21,0	1/1:0,4:4:12.02:116,12,0	1/1:1,4:5:11.96:117,12,0
chr10	65077989	.	C	CCCTCATA	11153.35	PASS	AB=0.718;AC=39;AF=0.696;AN=56;BaseQRankSum=12.903;DP=439;FS=50.041;HRun=0;HaplotypeScore=113.1016;InbreedingCoeff=0.8131;MQ=57.75;MQ0=26;MQRankSum=-10.378;QD=47.87;ReadPosRankSum=-2.298;VQSLOD=2.4822;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,102,2712	1/1:0,1:1:3.01:106,3,0	0/0:14,0:10:19.61:0,20,440	0/0:23,0:11:24.63:0,25,512	0/0:31,0:30:87.30:0,87,2381	1/1:5,6:7:10.54:155,11,0	1/1:8,7:14:39.13:1292,39,0	0/1:31,14:26:99:1179,0,367	0/0:25,1:18:45.15:0,45,1255	1/1:2,10:10:24.08:846,24,0	1/1:2,5:7:18.02:544,18,0	1/1:3,10:10:27.09:907,27,0	0/0:24,0:24:69.24:0,69,1922	1/1:1,4:2:6.02:210,6,0	1/1:3,11:10:18.06:632,18,0	1/1:9,6:8:21.05:639,21,0	1/1:4,5:8:21.07:666,21,0	1/1:2,4:3:9.03:318,9,0	1/1:6,2:3:4.78:26,5,0	1/1:3,4:7:10.80:234,11,0	1/1:5,3:8:12.02:337,12,0	1/1:6,9:14:35.99:1003,36,0	0/0:22,0:22:50.69:0,51,1290	0/0:25,0:25:75.26:0,75,2060	1/1:3,6:8:12.04:416,12,0	1/1:5,11:10:23.44:702,23,0	1/1:2,4:5:15.05:488,15,0	1/1:1,4:5:15.03:452,15,0
chr10	65078349	.	C	CT	12114.57	PASS	AB=0.760;AC=43;AF=0.768;AN=56;BaseQRankSum=13.334;DP=565;FS=6.777;HRun=0;HaplotypeScore=115.3960;InbreedingCoeff=0.8629;MQ=68.33;MQ0=18;MQRankSum=-6.938;QD=27.91;ReadPosRankSum=4.476;VQSLOD=4.8808;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,36:36:90.28:1141,90,0	1/1:0,3:3:9.03:117,9,0	0/0:22,0:16:42.13:0,42,557	0/0:20,1:15:40.87:0,41,502	0/0:21,0:20:60.19:0,60,823	1/1:1,19:20:54.16:679,54,0	1/1:1,13:13:33.09:423,33,0	0/1:39,18:29:99:275,0,581	1/1:0,22:22:60.20:786,60,0	1/1:1,15:16:42.52:532,43,0	1/1:0,5:6:17.92:207,18,0	1/1:1,16:15:42.14:546,42,0	0/0:21,0:21:57.19:0,57,796	1/1:5,15:20:48.49:637,48,0	1/1:1,19:20:50.68:653,51,0	1/1:0,15:14:39.13:503,39,0	1/1:3,38:41:96.26:1193,96,0	1/1:1,20:20:51.16:648,51,0	1/1:3,16:18:45.14:610,45,0	1/1:1,6:6:12.03:142,12,0	1/1:1,29:30:72.13:896,72,0	1/1:0,9:9:21.07:268,21,0	0/0:16,0:16:45.15:0,45,628	0/0:30,0:30:87.23:0,87,1177	1/1:1,12:13:36.08:436,36,0	1/1:3,16:19:53.75:667,54,0	1/1:1,20:20:54.17:682,54,0	1/1:5,1:6:5.97:75,6,0
chr10	65078913	.	T	TCACACGGCCAG	850.52	PASS	AB=0.683;AC=1;AF=0.019;AN=52;BaseQRankSum=4.151;DP=680;FS=3.641;HRun=0;HaplotypeScore=219.2788;InbreedingCoeff=-0.0235;MQ=42.52;MQ0=60;MQRankSum=-2.839;QD=19.78;ReadPosRankSum=2.616;VQSLOD=2.8174;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:36:90.11:0,90,2370	0/0:11,0:11:26.97:0,27,542	./.	./.	0/0:21,0:21:44.87:0,45,1329	0/0:19,0:18:36.11:0,36,1094	0/0:32,0:24:56.96:0,57,1420	0/0:106,0:90:99:0,235,6259	0/1:23,15:42:99:925,0,1524	0/0:14,0:13:33.10:0,33,907	0/0:10,0:9:11.78:0,12,328	0/0:18,0:18:42.52:0,43,1067	0/0:32,0:32:78.23:0,78,2424	0/0:21,0:21:54.16:0,54,1651	0/0:16,0:16:39.11:0,39,1196	0/0:18,1:16:36.11:0,36,1133	0/0:23,0:23:57.08:0,57,1653	0/0:20,0:18:54.15:0,54,1713	0/0:24,0:20:51.11:0,51,1297	0/0:7,0:5:12.03:0,12,326	0/0:38,0:33:68.90:0,69,1849	0/0:14,0:10:21.03:0,21,491	0/0:15,0:15:29.97:0,30,860	0/0:41,0:41:99:0,114,3526	0/0:8,0:4:12.03:0,12,230	0/0:19,0:18:45.11:0,45,1478	0/0:18,0:15:45.05:0,45,1313	0/0:11,0:11:32.98:0,33,589
chr10	65078945	.	CA	C	1492.69	PASS	AB=0.857;AC=2;AF=0.038;AN=52;BaseQRankSum=-3.763;DP=641;FS=5.976;HRun=1;HaplotypeScore=129.2404;InbreedingCoeff=-0.0673;MQ=40.32;MQ0=37;MQRankSum=-4.146;QD=12.24;ReadPosRankSum=-6.802;VQSLOD=-0.3788;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:71.38:0,71,516	0/0:8,0:7:11.88:0,12,85	./.	./.	0/0:16,0:16:30.10:0,30,480	0/0:20,0:19:13.09:0,13,257	0/0:23,0:16:41.81:0,42,315	0/1:64,43:97:99:1561,0,639	0/0:46,0:43:88.92:0,89,738	0/0:16,0:14:21.69:0,22,255	0/0:6,0:5:2.99:0,3,23	0/0:16,0:14:6.75:0,7,182	0/0:37,0:37:99:0,108,1700	0/0:20,0:20:50.42:0,50,376	0/0:20,0:19:28.84:0,29,347	0/0:24,0:21:3.51:0,4,292	0/0:23,0:22:41.56:0,42,302	0/0:21,0:19:26.02:0,26,283	0/1:15,0:10:17.95:18,0,116	0/0:7,0:4:6.88:0,7,56	0/0:31,0:26:49.97:0,50,367	0/0:8,0:5:11.95:0,12,92	0/0:17,0:17:36.12:0,36,575	0/0:35,0:35:96.33:0,96,1532	0/0:12,0:7:17.84:0,18,131	0/0:24,0:23:30.35:0,30,358	0/0:15,0:12:28.55:0,29,212	0/0:2,0:2:5.88:0,6,38
chr10	65079948	.	GTTTC	G	711.44	PASS	AB=0.591;AC=3;AF=0.060;AN=50;BaseQRankSum=1.673;DP=538;FS=2.344;HRun=0;HaplotypeScore=98.5261;InbreedingCoeff=0.5298;MQ=31.37;MQ0=105;MQRankSum=-4.698;QD=13.68;ReadPosRankSum=-1.134;VQSLOD=3.2970;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,25:18:18.06:341,18,0	0/0:8,0:5:12.04:0,12,323	./.	./.	0/0:28,0:28:63.22:0,63,1696	0/0:19,0:18:27.02:0,27,663	0/0:20,0:11:24.08:0,24,517	0/0:42,0:15:39.08:0,39,799	0/1:8,18:25:99:472,0,283	0/0:23,0:21:54.19:0,54,1450	0/0:7,0:4:0:0,0,0	0/0:21,0:18:30.10:0,30,800	0/0:13,0:13:33.11:0,33,891	0/0:20,0:19:33.06:0,33,760	0/0:32,0:30:54.12:0,54,1323	0/0:21,0:19:39.39:0,39,985	0/0:16,0:11:18.06:0,18,412	0/0:7,0:6:12.04:0,12,323	0/0:21,0:17:45.13:0,45,1086	0/0:11,0:6:18.06:0,18,462	./.	0/0:17,0:15:9.03:0,9,242	0/0:15,0:13:24.08:0,24,623	0/0:24,0:23:27.09:0,27,685	0/0:8,0:6:5.95:0,6,99	0/0:13,0:13:36.08:0,36,909	0/0:32,0:31:54.52:0,55,1385	0/0:10,0:3:9.03:0,9,242
chr10	65080583	.	GA	G	3932.25	PASS	AB=1.000;AC=36;AF=0.643;AN=56;BaseQRankSum=17.842;DP=767;FS=13.557;HRun=2;HaplotypeScore=104.5469;InbreedingCoeff=0.8016;MQ=49.91;MQ0=77;MQRankSum=0.576;QD=8.35;ReadPosRankSum=7.246;VQSLOD=-0.5837;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,147,1865	1/1:20,0:20:16.88:148,17,0	0/0:23,0:4:11.95:0,12,129	0/0:33,0:8:14.14:0,14,157	0/0:25,0:25:75.24:0,75,1094	1/1:20,1:20:52.91:261,53,0	0/1:28,0:28:99:115,0,125	0/0:66,0:31:69.17:0,69,886	0/0:33,0:32:93.31:0,93,1374	1/1:24,0:23:45.47:161,45,0	1/1:17,0:17:37.51:168,38,0	1/1:35,0:35:34.18:274,34,0	0/0:25,0:25:75.17:0,75,1074	1/1:34,0:34:85.12:402,85,0	1/1:35,0:35:91.18:415,91,0	1/1:21,0:21:52.47:230,52,0	1/1:30,0:30:15.76:164,16,0	1/1:20,0:20:41.36:152,41,0	0/1:12,0:7:8.31:8,0,43	1/1:22,2:23:10.53:187,11,0	1/1:36,0:35:76.33:268,76,0	1/1:25,2:27:54.40:268,54,0	0/0:11,0:10:27.08:0,27,384	0/0:30,0:30:87.25:0,87,1240	1/1:22,0:22:5.81:130,6,0	1/1:27,0:26:12.15:156,12,0	1/1:33,1:33:76.52:401,77,0	1/1:4,0:4:5.39:23,5,0
chr10	65080585	.	AC	A	13357.22	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=10.687;DP=774;FS=22.305;HRun=5;HaplotypeScore=72.1267;InbreedingCoeff=0.9749;MQ=49.89;MQ0=79;MQRankSum=-1.932;QD=28.73;ReadPosRankSum=5.759;VQSLOD=3.0425;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,135,1724	1/1:1,19:20:45.13:510,45,0	0/0:25,0:5:12:0,12,138	0/0:33,0:8:17.88:0,18,150	0/0:27,0:27:81.12:0,81,1002	1/1:2,20:21:60.17:677,60,0	1/1:5,20:25:51.14:578,51,0	0/0:72,0:36:77.95:0,78,873	0/0:34,0:33:99:0,99,1309	1/1:2,23:23:69.17:764,69,0	1/1:0,17:17:42.12:475,42,0	1/1:1,32:33:84.23:944,84,0	0/0:25,0:25:72.24:0,72,983	1/1:0,34:34:96.27:1086,96,0	1/1:0,36:36:99:1185,105,0	1/1:0,20:20:60.17:678,60,0	1/1:3,26:29:66.19:748,66,0	1/1:1,20:21:51.14:578,51,0	1/1:6,6:7:14.99:147,15,0	1/1:3,21:23:60.17:678,60,0	1/1:0,36:35:96.27:1089,96,0	1/1:2,24:26:63.18:708,63,0	0/0:11,0:10:27.08:0,27,354	0/0:32,0:32:96.23:0,96,1240	1/1:2,20:22:61.02:668,61,0	1/1:1,24:24:69.18:773,69,0	1/1:2,32:33:90.23:1003,90,0	1/1:0,4:4:6.02:68,6,0
chr10	65081151	.	T	TAATA	1468.93	PASS	AC=22;AF=0.647;AN=34;BaseQRankSum=4.913;DP=261;FS=15.627;HRun=0;HaplotypeScore=39.4467;InbreedingCoeff=0.6864;MQ=41.64;MQ0=23;MQRankSum=-6.761;QD=13.99;ReadPosRankSum=0.877;VQSLOD=1.0625;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,3:9:6.02:152,6,0	./.	0/0:16,0:3:7.84:0,8,103	0/0:23,0:6:15.05:0,15,256	0/0:20,0:20:45.15:0,45,782	./.	./.	1/1:8,7:9:15.04:330,15,0	./.	./.	1/1:4,3:4:6.02:152,6,0	./.	0/0:20,0:20:48.14:0,48,804	./.	1/1:2,2:1:3.01:76,3,0	./.	1/1:7,7:10:12.04:267,12,0	1/1:5,5:7:6.02:152,6,0	./.	1/1:8,2:8:6.02:152,6,0	./.	1/1:4,4:6:6.02:152,6,0	0/0:14,0:14:30.10:0,30,522	0/0:13,0:13:30.10:0,30,521	1/1:3,7:4:3.01:76,3,0	1/1:2,4:2:3:26,3,0	1/1:4,3:4:3.01:76,3,0	./.
chr10	65081509	.	TA	T	3171.83	PASS	AB=0.732;AC=41;AF=0.759;AN=54;BaseQRankSum=13.813;DP=447;FS=0.000;HRun=1;HaplotypeScore=104.3831;InbreedingCoeff=0.7381;MQ=53.74;MQ0=15;MQRankSum=-12.900;QD=10.90;ReadPosRankSum=0.069;VQSLOD=1.4357;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,15:10:21.40:231,21,0	1/1:0,1:1:3.01:30,3,0	0/0:28,0:20:60.15:0,60,850	0/0:22,1:18:45.14:0,45,682	0/0:30,0:30:81.28:0,81,1291	1/1:1,10:4:12.03:125,12,0	1/1:0,10:2:6.02:65,6,0	1/1:30,23:10:30.07:314,30,0	0/1:26,15:27:99:131,0,606	1/1:1,6:5:15.03:152,15,0	1/1:3,14:16:33.28:356,33,0	1/1:0,13:9:27.07:290,27,0	0/0:17,0:17:51.17:0,51,815	1/1:1,10:3:6.01:64,6,0	1/1:0,11:2:6.01:64,6,0	1/1:0,12:4:12.03:129,12,0	1/1:0,8:5:15.04:166,15,0	1/1:2,3:3:8.69:74,9,0	1/1:2,8:4:12.02:119,12,0	1/1:1,14:15:41.55:425,42,0	./.	1/1:1,5:3:9.02:93,9,0	0/0:19,0:19:54.14:0,54,835	0/0:35,0:35:99:0,105,1655	1/1:1,4:3:9.02:91,9,0	1/1:1,12:8:21.06:226,21,0	1/1:3,18:11:18.81:211,19,0	1/1:2,0:2:1.36:3,1,0
chr10	65082617	.	AG	A	6978.39	PASS	AC=38;AF=0.760;AN=50;BaseQRankSum=2.200;DP=367;FS=11.244;HRun=3;HaplotypeScore=36.8674;InbreedingCoeff=0.9393;MQ=39.68;MQ0=54;MQRankSum=-2.174;QD=26.43;ReadPosRankSum=1.360;VQSLOD=2.9028;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	1/1:0,3:3:9.03:111,9,0	0/0:9,0:6:15.05:0,15,216	0/0:8,0:3:8.90:0,9,102	0/0:28,0:19:54.18:0,54,776	1/1:1,7:6:9.03:111,9,0	1/1:1,11:8:15.05:186,15,0	./.	./.	1/1:1,21:21:60.19:743,60,0	1/1:0,16:14:42.13:520,42,0	1/1:0,13:13:30.09:371,30,0	0/0:12,0:10:18.06:0,18,257	1/1:2,13:13:36.11:445,36,0	1/1:1,15:12:33.10:408,33,0	1/1:0,13:12:33.10:408,33,0	1/1:3,24:20:48.15:595,48,0	1/1:0,13:11:30.09:372,30,0	1/1:3,7:6:18.06:223,18,0	1/1:2,10:10:24.08:297,24,0	1/1:5,11:7:15.05:186,15,0	1/1:2,4:4:12.04:149,12,0	0/0:19,0:9:24.08:0,24,345	0/0:15,0:10:18.06:0,18,258	1/1:0,18:17:51.16:632,51,0	1/1:5,17:18:48.15:593,48,0	1/1:1,15:16:32.74:408,33,0	1/1:0,6:6:18.06:222,18,0
chr10	65082700	.	AGTGCTCTTAAGCCCCCCGG	A	2295.62	PASS	AC=6;AF=0.150;AN=40;BaseQRankSum=6.295;DP=481;FS=45.579;HRun=0;HaplotypeScore=101.4235;InbreedingCoeff=0.7855;MQ=21.38;MQ0=263;MQRankSum=-2.010;QD=49.90;ReadPosRankSum=0.761;VQSLOD=0.5861;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:21,7:7:18.06:892,18,0	./.	./.	./.	0/0:21,0:1:3.01:0,3,238	0/0:25,0:20:17.98:0,18,1547	0/0:27,0:9:16.77:0,17,1258	1/1:4,4:4:12.04:404,12,0	1/1:0,10:10:21.07:1126,21,0	0/0:14,0:6:17.95:0,18,1358	./.	0/0:13,0:12:18.06:0,18,1376	0/0:17,0:13:17.85:0,18,1131	0/0:17,0:13:17.88:0,18,1437	0/0:21,0:15:15.05:0,15,1147	0/0:18,0:17:34.79:0,35,2281	0/0:31,0:14:15.05:0,15,988	0/0:17,0:4:6.02:0,6,551	0/0:17,0:11:33.11:0,33,2509	./.	0/0:24,0:6:8.60:0,9,476	0/0:15,0:2:3.01:0,3,145	./.	0/0:31,0:8:18.06:0,18,1349	./.	0/0:20,0:12:33.11:0,33,2630	0/0:20,0:17:24.38:0,24,1392	./.
chr10	65083159	.	G	GT	1221	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-8.308;DP=665;FS=0.000;HRun=7;HaplotypeScore=119.9916;InbreedingCoeff=0.9849;MQ=44.67;MQ0=52;MQRankSum=-3.657;QD=13.87;ReadPosRankSum=-4.423;VQSLOD=2.0401;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:46:99:0,120,1158	0/0:10,0:10:26.71:0,27,242	0/0:19,0:11:30.04:0,30,283	0/0:22,0:13:32.71:0,33,292	0/0:32,0:31:81.06:0,81,770	0/0:23,0:22:62.97:0,63,594	0/0:24,0:20:53.96:0,54,507	1/1:75,13:80:99:1316,132,0	0/0:28,0:26:75.03:0,75,706	0/0:22,0:21:63.10:0,63,608	0/0:6,0:6:17.99:0,18,165	0/0:19,0:18:48.08:0,48,462	0/0:23,0:23:69.09:0,69,656	0/0:20,0:19:54.09:0,54,521	0/0:12,0:11:27.04:0,27,260	0/0:15,0:14:41.90:0,42,391	0/0:28,0:25:72.11:0,72,693	0/0:20,0:19:51.08:0,51,492	0/0:25,0:21:59.30:0,59,528	0/0:19,0:16:45.07:0,45,434	0/0:20,0:19:50.92:0,51,477	0/0:14,0:14:41.83:0,42,374	0/0:17,0:15:45.04:0,45,423	0/0:33,0:31:75.10:0,75,718	0/0:14,0:12:36.06:0,36,347	0/0:32,0:29:80.92:0,81,764	0/0:24,0:23:66.11:0,66,636	0/0:7,0:7:21.03:0,21,203
chr10	65083166	.	T	TA	2495.41	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-12.238;DP=628;FS=1.492;HRun=3;HaplotypeScore=114.8688;InbreedingCoeff=0.7726;MQ=45.92;MQ0=28;MQRankSum=-3.993;QD=29.02;ReadPosRankSum=-5.454;VQSLOD=1.3806;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:43:99:0,123,1447	0/0:10,0:10:0.99:0,1,50	0/0:17,0:11:30.08:0,30,346	0/0:21,0:13:32.34:0,32,338	0/0:30,0:30:81.21:0,81,950	0/0:22,0:22:53.92:0,54,226	0/0:23,0:20:40.12:0,40,137	1/1:26,60:78:99:2590,217,0	0/0:26,0:25:69.21:0,69,823	0/0:22,0:21:40.54:0,41,112	0/0:7,0:7:12.23:0,12,53	0/0:18,0:18:42.39:0,42,171	0/0:24,0:24:66.19:0,66,777	0/0:18,0:18:47.36:0,47,191	0/0:10,0:10:23.38:0,23,96	0/0:15,0:14:33.68:0,34,127	0/0:27,0:25:56.66:0,57,199	0/0:18,0:18:18.78:0,19,116	0/0:25,0:21:29.48:0,29,76	0/0:16,0:16:36.44:0,36,132	0/0:18,0:18:34.43:0,34,115	0/0:14,0:14:24.65:0,25,95	0/0:18,0:17:42.12:0,42,491	0/0:28,0:28:78.13:0,78,898	0/0:12,0:12:28.50:0,28,111	0/0:27,0:27:49.04:0,49,135	0/0:24,0:23:57.33:0,57,228	0/0:7,0:7:15.33:0,15,47
chr10	65083215	.	G	GT	6303.39	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=6.798;DP=320;FS=2.157;HRun=1;HaplotypeScore=41.6257;InbreedingCoeff=0.8818;MQ=69.31;MQ0=20;MQRankSum=-6.636;QD=33.35;ReadPosRankSum=-0.805;VQSLOD=4.2131;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,18:19:48.12:686,48,0	1/1:0,4:3:9.03:135,9,0	0/0:29,0:17:51.11:0,51,613	0/0:19,0:10:30.09:0,30,371	0/0:18,0:18:48.08:0,48,588	1/1:0,11:11:26.98:351,27,0	1/1:0,5:3:6.02:90,6,0	1/1:3,2:3:3.01:45,3,0	1/1:0,17:16:48.11:686,48,0	1/1:3,10:12:30.09:430,30,0	1/1:0,6:4:9.03:134,9,0	1/1:1,7:8:18.06:269,18,0	0/0:21,0:21:54.13:0,54,680	1/1:0,9:9:27.09:390,27,0	1/1:0,4:4:8.99:110,9,0	1/1:0,5:4:12.04:179,12,0	1/1:2,10:10:21:287,21,0	1/1:1,8:9:24.08:359,24,0	1/1:0,9:8:24.07:331,24,0	1/1:0,8:8:21.07:314,21,0	1/1:0,6:6:12.04:180,12,0	1/1:1,6:7:17.99:237,18,0	0/0:17,0:16:48.16:0,48,622	0/0:27,0:27:81.26:0,81,1049	1/1:2,6:5:15.05:217,15,0	1/1:0,10:10:30.06:407,30,0	1/1:0,9:9:24.03:333,24,0	1/1:0,3:3:9.03:135,9,0
chr10	65084048	.	TTC	T	9240.43	PASS	AB=0.840;AC=38;AF=0.679;AN=56;BaseQRankSum=6.832;DP=601;FS=5.902;HRun=0;HaplotypeScore=136.2360;InbreedingCoeff=0.7578;MQ=46.86;MQ0=19;MQRankSum=-1.272;QD=29.06;ReadPosRankSum=5.309;VQSLOD=6.4135;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:22:4.65:0,5,244	1/1:0,8:8:24.08:367,24,0	0/0:32,0:8:15.24:0,15,143	0/0:44,0:9:8.57:0,9,237	0/0:39,0:39:99:0,114,2115	1/1:3,5:4:12.03:156,12,0	1/1:1,6:5:15.05:221,15,0	0/0:89,0:74:99:0,127,1283	0/1:23,0:17:46.86:47,0,85	1/1:4,10:12:1.14:430,1,0	1/1:3,24:26:63.21:944,63,0	1/1:0,11:9:24.08:361,24,0	0/0:19,0:19:56.68:0,57,994	1/1:1,13:12:33.11:496,33,0	1/1:2,17:13:36.04:509,36,0	1/1:3,9:8:21.04:296,21,0	1/1:4,16:16:42.08:572,42,0	1/1:2,8:8:21.07:294,21,0	0/1:9,8:12:68.04:166,0,68	1/1:2,22:22:63.14:921,63,0	1/1:1,8:7:18.06:266,18,0	1/1:3,11:13:36.12:531,36,0	0/0:17,0:17:51.17:0,51,907	0/0:19,0:19:57.20:0,57,1051	1/1:6,16:20:60.09:835,60,0	1/1:3,15:12:30.10:438,30,0	1/1:6,23:24:69.23:1010,69,0	1/1:4,8:12:30.09:382,30,0
chr10	65084050	.	CTTT	C	6938.51	PASS	AB=0.928;AC=40;AF=0.714;AN=56;BaseQRankSum=10.088;DP=597;FS=2.283;HRun=3;HaplotypeScore=151.5149;InbreedingCoeff=0.6402;MQ=45.66;MQ0=21;MQRankSum=-2.150;QD=16.21;ReadPosRankSum=3.101;VQSLOD=1.7698;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:15,8:21:12.26:248,0,12	1/1:8,0:8:23.91:204,24,0	0/0:30,0:7:14.70:0,15,170	0/0:43,0:9:16.94:0,17,265	0/0:39,0:39:99:0,114,2672	1/1:8,0:4:11.93:102,12,0	1/1:9,0:7:20.73:152,21,0	0/1:89,3:76:99:1247,0,578	1/1:10,13:17:6.05:358,6,0	0/1:14,0:12:5.98:252,0,6	1/1:24,0:23:62.71:506,63,0	1/1:11,0:9:23.91:199,24,0	0/0:19,0:19:57.17:0,57,1252	1/1:14,0:12:32.79:249,33,0	1/1:21,0:15:40.85:302,41,0	1/1:11,0:7:17.95:160,18,0	1/1:20,0:16:38.20:293,38,0	1/1:9,0:7:20.83:160,21,0	0/1:17,0:12:74.47:74,0,82	1/1:23,0:21:62.70:497,63,0	1/1:8,0:6:17.94:157,18,0	1/1:13,0:12:35.86:302,36,0	0/0:17,0:17:51.16:0,51,1103	0/0:19,0:19:57.19:0,57,1333	1/1:22,0:20:59.52:469,60,0	1/1:17,0:11:29.86:257,30,0	1/1:28,0:23:68.64:549,69,0	1/1:12,0:12:29.58:200,30,0
chr10	65084088	.	TTC	T	3655.62	PASS	AB=1.000;AC=40;AF=0.714;AN=56;BaseQRankSum=8.358;DP=544;FS=8.327;HRun=0;HaplotypeScore=128.6247;InbreedingCoeff=0.5941;MQ=51.18;MQ0=16;MQRankSum=-5.244;QD=9.33;ReadPosRankSum=-3.061;VQSLOD=2.1748;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:20,0:20:12.47:202,0,12	1/1:10,1:10:15.58:168,16,0	0/0:32,0:9:17.84:0,18,175	0/0:30,0:8:6.16:0,6,61	0/0:32,0:32:85.82:0,86,1206	1/1:9,0:6:14.52:82,15,0	1/1:10,0:9:17.29:101,17,0	0/1:93,0:80:85.51:86,0,836	1/1:25,1:21:44.48:291,44,0	1/1:11,1:11:32.40:243,32,0	1/1:22,0:21:40.40:299,40,0	1/1:8,0:8:11.27:68,11,0	0/0:15,0:15:42.44:0,42,549	1/1:16,0:15:25.46:161,25,0	1/1:18,1:13:28.01:184,28,0	1/1:12,1:10:17.99:143,18,0	1/1:18,0:17:38.42:252,38,0	0/1:10,0:8:16:16,0,31	1/1:12,0:11:11.52:146,12,0	1/1:19,2:19:49.87:346,50,0	0/1:7,0:6:1.22:37,0,1	1/1:12,1:12:13.01:178,13,0	0/0:19,0:19:56.99:0,57,690	0/0:24,0:24:72.19:0,72,1021	1/1:15,0:15:16.23:205,16,0	1/1:15,1:14:22.84:215,23,0	1/1:16,0:15:5.97:187,6,0	1/1:5,0:5:0.38:46,0,0
chr10	65084089	.	TC	T	6341.46	PASS	AB=0.870;AC=43;AF=0.768;AN=56;BaseQRankSum=7.789;DP=544;FS=4.999;HRun=1;HaplotypeScore=110.4305;InbreedingCoeff=0.7311;MQ=51.16;MQ0=16;MQRankSum=-5.513;QD=15.13;ReadPosRankSum=-2.254;VQSLOD=3.9482;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:16,5:21:37.73:405,38,0	1/1:6,5:10:28.22:283,28,0	0/0:32,1:10:17.22:0,17,136	0/1:31,0:8:3.78:4,0,72	0/0:33,0:33:87.47:0,87,955	1/1:3,6:6:15.02:183,15,0	1/1:4,5:8:18.01:202,18,0	0/1:82,11:80:99:348,0,589	1/1:22,4:21:47.27:350,47,0	1/1:8,4:11:32.95:326,33,0	1/1:13,9:21:55.36:504,55,0	1/1:5,2:7:17.89:147,18,0	0/0:16,0:16:40.72:0,41,424	1/1:13,3:15:36.56:264,37,0	1/1:13,6:13:38.84:345,39,0	1/1:11,2:10:23.92:208,24,0	1/1:9,9:17:41.84:404,42,0	0/1:6,4:8:6.64:95,0,7	1/1:8,4:11:29.48:282,29,0	1/1:13,8:19:55.54:509,56,0	1/1:5,2:6:16.79:143,17,0	1/1:10,2:11:30.37:269,30,0	0/0:19,0:19:56.90:0,57,554	0/0:24,0:24:72.09:0,72,794	1/1:11,3:14:36.87:305,37,0	1/1:14,2:14:35.32:299,35,0	1/1:11,5:15:39.88:357,40,0	1/1:2,2:4:10.27:110,10,0
chr10	65084090	.	CT	C	948.79	PASS	AB=0.994;AC=30;AF=0.536;AN=56;BaseQRankSum=6.962;DP=544;FS=19.805;HRun=13;HaplotypeScore=126.8252;InbreedingCoeff=-0.0402;MQ=51.09;MQ0=17;MQRankSum=-3.485;QD=2.43;ReadPosRankSum=1.907;VQSLOD=-0.2908;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:21,0:21:48.78:49,0,94	0/1:11,0:10:13.02:53,0,13	0/0:31,0:10:16.99:0,17,115	0/0:31,0:8:10.79:0,11,91	0/0:32,0:33:68.75:0,69,639	1/1:9,0:6:11.41:61,11,0	1/1:9,0:8:11.73:75,12,0	0/1:85,9:81:99:194,0,426	0/1:26,0:21:4.47:16,0,4	1/1:12,0:11:10.79:62,11,0	0/1:21,0:21:10.18:87,0,10	1/1:7,0:7:2.78:18,3,0	0/0:15,1:16:14.10:0,14,273	0/1:16,0:15:12.85:13,0,14	1/1:19,0:13:9.81:60,10,0	1/1:13,0:10:4.41:18,4,0	1/1:18,0:17:18.71:106,19,0	0/1:11,0:8:25.15:25,0,39	0/1:12,0:11:28.24:53,0,28	0/1:21,0:19:11.31:85,0,11	1/1:7,0:6:6.06:36,6,0	0/1:12,0:11:9.51:27,0,10	0/0:17,0:18:38.89:0,39,359	0/0:23,0:23:66.07:0,66,627	0/1:13,0:13:16.32:16,0,64	0/1:17,0:14:20.07:25,0,20	0/1:16,0:15:22.35:22,0,26	0/1:4,0:4:20.18:24,0,20
chr10	65084156	.	AG	A	5255.45	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=13.562;DP=520;FS=9.846;HRun=2;HaplotypeScore=61.9427;InbreedingCoeff=0.9533;MQ=48.60;MQ0=31;MQRankSum=-0.145;QD=24.44;ReadPosRankSum=8.346;VQSLOD=3.1343;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:33:96.27:0,96,1393	1/1:2,3:3:6.02:78,6,0	0/0:24,0:13:38.34:0,38,523	0/0:41,0:27:72.23:0,72,1015	0/0:16,0:16:39.09:0,39,559	1/1:0,12:6:18.06:234,18,0	1/1:0,15:11:33.11:428,33,0	0/0:105,0:97:99:0,262,3840	0/0:14,2:14:39.09:0,39,560	1/1:1,9:7:21.07:272,21,0	1/1:1,6:7:15.05:194,15,0	1/1:0,13:8:18.06:234,18,0	0/0:24,0:24:69.22:0,69,1011	1/1:0,12:8:24.08:311,24,0	1/1:0,19:12:27.09:350,27,0	1/1:0,15:11:33.11:428,33,0	1/1:0,20:19:51.17:662,51,0	1/1:2,6:6:15.05:195,15,0	1/1:0,9:4:12.04:156,12,0	1/1:1,8:6:15.05:195,15,0	1/1:0,13:12:33.11:428,33,0	1/1:1,7:6:15.05:195,15,0	0/0:21,0:21:60.20:0,60,896	0/0:24,0:24:66.21:0,66,969	1/1:0,10:8:21.07:273,21,0	1/1:1,12:9:24.08:312,24,0	1/1:0,14:7:15.05:195,15,0	1/1:0,3:3:9.03:116,9,0
chr10	65084247	.	T	TA	1920.25	PASS	AB=0.685;AC=1;AF=0.018;AN=56;BaseQRankSum=-10.601;DP=618;FS=1.036;HRun=1;HaplotypeScore=62.1635;InbreedingCoeff=-0.0278;MQ=69.10;MQ0=2;MQRankSum=2.211;QD=14.22;ReadPosRankSum=-4.538;VQSLOD=1.3099;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:87.24:0,87,1087	0/0:7,0:2:6:0,6,62	0/0:14,0:14:32.59:0,33,348	0/0:11,0:11:4.27:0,4,159	0/0:23,0:23:69.18:0,69,846	0/0:14,0:14:39.09:0,39,461	0/0:11,0:9:24.01:0,24,275	0/1:73,62:130:99:1995,0,1675	0/0:23,0:23:60.18:0,60,754	0/0:12,0:10:30.07:0,30,361	0/0:19,0:11:30.06:0,30,359	0/0:19,0:18:45.13:0,45,564	0/0:18,0:18:54.16:0,54,683	0/0:22,0:22:60.05:0,60,715	0/0:23,0:23:60.16:0,60,733	0/0:15,0:15:45.02:0,45,515	0/0:24,0:24:63.20:0,63,811	0/0:17,0:16:44.84:0,45,535	0/0:22,0:19:57.12:0,57,690	0/0:24,0:13:36.10:0,36,441	0/0:18,0:18:51.17:0,51,659	0/0:11,0:9:24:0,24,275	0/0:15,0:15:42.12:0,42,528	0/0:29,0:29:87.27:0,87,1108	0/0:13,0:11:30.10:0,30,386	0/0:16,0:14:39.12:0,39,490	0/0:25,0:25:69.21:0,69,875	0/0:8,0:5:15.05:0,15,193
chr10	65084425	.	A	AT	161.17	PASS	AB=0.710;AC=1;AF=0.018;AN=56;BaseQRankSum=4.542;DP=613;FS=5.847;HRun=3;HaplotypeScore=70.2065;InbreedingCoeff=-0.0198;MQ=58.46;MQ0=18;MQRankSum=-3.949;QD=7.33;ReadPosRankSum=2.464;VQSLOD=0.8316;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:84.16:0,84,954	0/0:11,0:11:33.05:0,33,369	0/0:15,0:8:24.07:0,24,282	0/0:11,0:4:12.04:0,12,144	0/0:26,0:26:75.20:0,75,877	0/0:17,0:16:42.13:0,42,504	0/0:9,0:9:27.05:0,27,300	0/0:144,0:138:99:0,394,4556	0/1:13,9:21:99:236,0,375	0/0:22,0:21:60.18:0,60,719	0/0:22,0:22:60.13:0,60,694	0/0:8,0:8:24.06:0,24,277	0/0:12,0:12:33.08:0,33,375	0/0:14,0:14:42.13:0,42,504	0/0:20,0:20:60.17:0,60,710	0/0:14,0:14:39.11:0,39,458	0/0:25,0:25:72.22:0,72,863	0/0:19,0:19:57.17:0,57,684	0/0:14,0:15:41.92:0,42,481	0/0:23,0:23:63.19:0,63,755	0/0:8,0:8:18.06:0,18,216	0/0:10,0:9:26.86:0,27,292	0/0:18,0:18:54.17:0,54,648	0/0:21,0:21:60.16:0,60,705	0/0:29,0:28:81.24:0,81,963	0/0:16,0:16:45.13:0,45,529	0/0:19,0:17:57.17:0,57,684	0/0:14,0:13:39.09:0,39,453
chr10	65084441	.	A	AGT	292.14	PASS	AB=0.724;AC=1;AF=0.018;AN=56;BaseQRankSum=4.541;DP=646;FS=3.658;HRun=0;HaplotypeScore=82.1581;InbreedingCoeff=-0.0246;MQ=56.53;MQ0=30;MQRankSum=-3.819;QD=13.91;ReadPosRankSum=2.845;VQSLOD=3.4799;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:93.32:0,93,1518	0/0:7,0:7:21.07:0,21,342	0/0:20,0:3:6.01:0,6,68	0/0:16,0:3:9.02:0,9,118	0/0:23,0:23:69.24:0,69,1120	0/0:19,0:19:51.16:0,51,797	0/0:15,0:15:45.15:0,45,734	0/0:155,0:151:99:0,439,7007	0/1:13,8:19:99:367,0,432	0/0:20,0:20:60.20:0,60,970	0/0:22,0:22:57.18:0,57,900	0/0:6,0:6:18.06:0,18,294	0/0:9,0:9:27.09:0,27,420	0/0:17,0:17:51.17:0,51,810	0/0:15,0:15:45.15:0,45,734	0/0:19,0:19:57.19:0,57,930	0/0:26,0:26:78.24:0,78,1245	0/0:19,0:19:54.18:0,54,881	0/0:18,0:18:51.17:0,51,832	0/0:24,0:24:69.24:0,69,1125	0/0:10,0:10:24.08:0,24,386	0/0:10,0:9:27.09:0,27,434	0/0:20,0:20:60.20:0,60,952	0/0:22,0:22:66.23:0,66,1071	0/0:31,0:30:87.30:0,87,1414	0/0:18,0:18:51.17:0,51,832	0/0:21,0:19:63.20:0,63,994	0/0:10,0:9:27.09:0,27,440
chr10	65084549	.	CT	C	163.19	PASS	AB=0.745;AC=1;AF=0.018;AN=56;BaseQRankSum=5.213;DP=746;FS=25.335;HRun=5;HaplotypeScore=71.4832;InbreedingCoeff=-0.0209;MQ=68.10;MQ0=5;MQRankSum=-3.893;QD=4.29;ReadPosRankSum=3.619;VQSLOD=-0.5307;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,144,1923	0/0:5,0:5:9.03:0,9,123	0/0:26,0:22:66.16:0,66,855	0/0:22,0:18:54.16:0,54,683	0/0:19,0:19:57.16:0,57,747	0/0:20,0:20:54.18:0,54,739	0/0:31,0:31:90.26:0,90,1197	0/0:185,0:173:99:0,479,6462	0/1:25,13:35:99:238,0,883	0/0:23,0:23:63.21:0,63,862	0/0:11,0:11:30.08:0,30,383	0/0:26,0:26:75.23:0,75,997	0/0:22,0:22:66.22:0,66,903	0/0:17,0:17:48.15:0,48,641	0/0:17,0:17:48.16:0,48,657	0/0:13,0:13:39.13:0,39,533	0/0:27,0:27:75.22:0,75,992	0/0:11,0:11:33.11:0,33,448	0/0:25,0:25:69.21:0,69,926	0/0:13,0:11:27.09:0,27,369	0/0:29,0:29:81.27:0,81,1108	0/0:15,0:15:42.14:0,42,575	0/0:17,0:16:45.14:0,45,600	0/0:16,0:16:48.16:0,48,652	0/0:19,0:17:45.14:0,45,601	0/0:17,0:17:51.16:0,51,683	0/0:25,0:25:75.24:0,75,1009	0/0:6,0:5:15.04:0,15,190
chr10	65085341	.	C	CCTT	5047.90	PASS	AB=0.652;AC=3;AF=0.054;AN=56;BaseQRankSum=-9.570;DP=428;FS=53.148;HRun=0;HaplotypeScore=64.2323;InbreedingCoeff=0.5079;MQ=50.95;MQ0=6;MQRankSum=-7.191;QD=49.01;ReadPosRankSum=-6.482;VQSLOD=2.2040;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:54.18:0,54,893	0/0:3,0:3:9.03:0,9,150	0/0:21,0:9:24:0,24,326	0/0:17,0:12:33.53:0,34,494	0/0:8,0:8:21.07:0,21,349	0/0:9,0:9:21.07:0,21,349	0/0:18,0:18:48.16:0,48,776	1/1:16,65:82:99:4563,223,0	0/1:7,7:15:99:484,0,300	0/0:17,0:16:48.16:0,48,799	0/0:4,0:4:9.01:0,9,124	0/0:18,0:18:54.18:0,54,892	0/0:16,0:16:45.15:0,45,746	0/0:6,0:6:12.04:0,12,199	0/0:18,0:18:54.14:0,54,865	0/0:9,0:9:24.01:0,24,367	0/0:20,0:20:57.19:0,57,947	0/0:13,0:13:36.04:0,36,539	0/0:20,0:18:45.14:0,45,703	0/0:6,0:6:18.06:0,18,298	0/0:20,0:20:57.19:0,57,945	0/0:9,0:9:21.07:0,21,349	0/0:14,0:14:39.12:0,39,625	0/0:7,0:7:21.07:0,21,350	0/0:6,0:6:15.05:0,15,250	0/0:14,0:14:36.12:0,36,600	0/0:13,0:13:33.08:0,33,510	0/0:1,0:1:3.01:0,3,50
chr10	65085478	.	T	TGCCG	1836.77	PASS	AB=0.949;AC=17;AF=0.315;AN=54;BaseQRankSum=6.067;DP=468;FS=6.142;HRun=0;HaplotypeScore=105.5806;InbreedingCoeff=-0.2629;MQ=31.91;MQ0=43;MQRankSum=-4.931;QD=6.25;ReadPosRankSum=6.421;VQSLOD=0.8535;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:11,0:8:48.21:48,0,60	0/0:3,0:3:4.15:0,4,19	0/0:34,0:4:11.95:0,12,107	0/0:26,0:7:8.45:0,8,109	0/0:6,0:5:15.02:0,15,204	0/1:4,5:10:26:34,0,26	0/1:25,0:14:42.18:101,0,42	./.	0/1:31,0:25:66.63:67,0,239	0/1:21,0:15:42.39:192,0,42	0/1:7,0:7:9.16:9,0,30	0/1:31,0:22:99:114,0,140	0/0:7,0:7:15.02:0,15,166	0/1:21,1:15:99:133,0,125	0/1:27,0:23:73.70:278,0,74	0/1:25,0:20:80.63:120,0,81	0/1:15,0:14:11.69:12,0,18	0/0:14,0:10:11.48:0,11,65	0/0:11,0:2:3.45:0,3,22	0/1:13,0:11:4.20:176,0,4	0/0:39,0:26:25.08:0,25,233	1/1:18,0:16:19.77:230,20,0	0/0:9,0:8:18.05:0,18,272	0/0:16,0:16:39.51:0,40,535	0/1:12,0:11:40.79:170,0,41	0/1:9,5:18:99:139,0,102	0/1:6,0:6:3.94:171,0,4	0/0:4,0:3:2.37:0,2,8
chr10	65085592	.	CCTGT	C	322.36	PASS	AB=0.980;AC=16;AF=0.296;AN=54;BaseQRankSum=7.308;DP=491;FS=6.547;HRun=0;HaplotypeScore=92.8010;InbreedingCoeff=-0.1063;MQ=38.07;MQ0=21;MQRankSum=-5.696;QD=1.25;ReadPosRankSum=-4.666;VQSLOD=-0.1195;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:15:41.69:0,42,498	0/1:4,0:3:17.98:34,0,18	0/1:22,0:4:1.73:2,0,39	0/0:28,0:13:28.73:0,29,244	0/0:8,0:8:21.40:0,21,219	0/0:13,0:12:0.63:0,1,121	0/1:34,0:26:13.36:13,0,327	0/0:27,0:13:23.83:0,24,225	0/0:25,0:21:49.82:0,50,486	0/1:16,0:12:51.87:52,0,89	./.	0/1:33,0:28:74.81:75,0,243	0/0:19,0:19:54.11:0,54,897	0/1:27,0:21:23.93:24,0,159	0/1:15,7:18:17.35:17,0,158	0/1:19,0:14:99:106,0,205	0/1:12,0:10:29.99:30,0,49	0/0:15,0:13:17.38:0,17,233	0/0:9,0:6:17.97:0,18,164	0/0:6,0:3:0:0,0,0	0/1:36,0:24:15.19:15,0,231	1/1:8,0:3:5.69:30,6,0	0/0:6,0:6:6.02:0,6,78	0/0:51,0:51:99:0,130,2004	0/1:6,0:6:12.19:12,0,28	0/0:6,0:5:11.70:0,12,80	0/1:16,0:14:4.39:4,0,165	1/1:3,0:3:5.93:58,6,0
chr10	65085870	.	T	TC	6372.24	PASS	AB=0.555;AC=39;AF=0.722;AN=54;BaseQRankSum=1.529;DP=444;FS=111.841;HRun=3;HaplotypeScore=39.8578;InbreedingCoeff=0.5986;MQ=37.14;MQ0=11;MQRankSum=-11.005;QD=21.24;ReadPosRankSum=-0.449;VQSLOD=0.3869;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,14:12:12.04:170,12,0	./.	0/0:28,0:9:23.97:0,24,286	0/0:21,0:6:11.88:0,12,108	0/0:15,0:14:39.13:0,39,506	1/1:0,12:12:27.09:394,27,0	0/1:2,12:14:4.73:196,0,5	1/1:8,49:42:45.44:1604,45,0	1/1:1,18:20:39.13:575,39,0	1/1:0,7:4:12.04:180,12,0	1/1:0,5:4:3.01:45,3,0	1/1:4,17:17:33.11:484,33,0	0/0:16,0:16:45.15:0,45,584	1/1:0,25:24:36.12:538,36,0	1/1:0,12:9:21.07:304,21,0	1/1:1,13:11:18.06:269,18,0	1/1:0,16:14:27.09:403,27,0	0/1:2,8:8:23.91:165,0,24	0/1:2,6:6:20.88:193,0,21	1/1:0,7:5:6.02:90,6,0	1/1:3,11:14:8.36:133,8,0	1/1:1,10:7:3.01:45,3,0	0/0:10,0:10:30.10:0,30,388	0/0:51,1:52:99:0,123,1784	1/1:1,8:6:9.03:135,9,0	1/1:2,9:7:21.07:314,21,0	1/1:0,9:9:3.01:45,3,0	1/1:0,4:4:6.02:90,6,0
chr10	65086029	.	A	ATGC	262.57	PASS	AB=0.843;AC=4;AF=0.077;AN=52;BaseQRankSum=-2.834;DP=583;FS=5.837;HRun=0;HaplotypeScore=53.7100;InbreedingCoeff=0.1886;MQ=32.61;MQ0=96;MQRankSum=-2.724;QD=3.65;ReadPosRankSum=-1.141;VQSLOD=0.8960;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:26:24.08:0,24,406	0/0:6,0:6:18.06:0,18,307	./.	./.	0/0:30,0:29:42.14:0,42,706	0/0:16,0:11:18.04:0,18,280	0/0:20,0:9:6.02:0,6,102	1/1:11,6:2:3.01:40,3,0	0/1:18,11:20:99:297,0,514	0/0:30,0:22:63.22:0,63,1073	0/0:23,0:20:42.14:0,42,716	0/0:23,0:17:30.10:0,30,509	0/0:18,0:15:12.02:0,12,193	0/0:16,0:13:24.07:0,24,383	0/0:15,0:12:18.06:0,18,304	0/0:19,0:19:36.12:0,36,614	0/0:29,0:19:3.01:0,3,51	0/0:30,0:16:15.05:0,15,245	0/1:24,0:7:26.92:27,0,238	0/0:13,0:10:27.09:0,27,460	0/0:27,0:15:8.74:0,9,153	0/0:24,0:23:42.14:0,42,702	0/0:15,0:15:27.09:0,27,460	0/0:27,0:21:3.01:0,3,51	0/0:19,0:12:30.10:0,30,508	0/0:33,0:29:84.29:0,84,1432	0/0:19,0:13:36.12:0,36,614	0/0:6,0:4:6:0,6,74
chr10	65086323	.	A	AAGGT	1905.30	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.328;DP=644;FS=0.000;HRun=0;HaplotypeScore=98.0812;InbreedingCoeff=0.8471;MQ=62.91;MQ0=19;MQRankSum=-5.320;QD=28.87;ReadPosRankSum=-6.950;VQSLOD=1.7717;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:34,1:34:75.24:0,75,1317	0/0:8,0:8:24.08:0,24,424	0/0:20,0:15:42.09:0,42,708	0/0:30,0:26:67.76:0,68,1194	0/0:24,0:24:54.18:0,54,945	0/0:12,1:11:33.11:0,33,571	0/0:30,0:29:72.25:0,72,1278	1/1:27,30:38:93.27:2000,93,0	0/0:40,0:39:99:0,111,1984	0/0:22,0:21:39.12:0,39,669	0/0:11,0:11:24.08:0,24,431	0/0:16,0:16:42.14:0,42,749	0/0:14,0:14:36.12:0,36,638	0/0:13,0:13:30.09:0,30,509	0/0:22,0:22:54.18:0,54,954	0/0:21,0:21:60.17:0,60,1028	0/0:32,0:32:83.83:0,84,1415	0/0:19,0:18:51.17:0,51,906	0/0:21,0:20:51.16:0,51,876	0/0:16,0:16:45.15:0,45,803	0/0:30,0:30:87.28:0,87,1522	0/0:21,0:21:54.18:0,54,933	0/0:15,0:15:42.14:0,42,755	0/0:28,0:27:66.18:0,66,1134	0/0:22,0:22:57.20:0,57,1025	0/0:28,1:28:78.26:0,78,1369	0/0:24,0:24:60.17:0,60,1019	0/0:2,0:2:3.01:0,3,54
chr10	65086616	.	A	AG	4948.28	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-2.758;DP=757;FS=0.795;HRun=1;HaplotypeScore=73.9092;InbreedingCoeff=0.9775;MQ=50.74;MQ0=26;MQRankSum=-9.057;QD=34.36;ReadPosRankSum=-6.678;VQSLOD=2.4466;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:47:99:0,129,1671	0/0:10,0:9:24.08:0,24,311	0/0:20,0:13:36.07:0,36,443	0/0:14,0:9:20.59:0,21,255	0/0:24,0:24:72.22:0,72,920	0/0:13,0:12:30.10:0,30,385	0/0:24,0:23:57.18:0,57,737	1/1:9,135:118:99:4948,337,0	0/0:36,0:33:93.30:0,93,1207	0/0:30,0:26:78.24:0,78,980	0/0:17,0:15:42.14:0,42,543	0/0:22,0:21:57.18:0,57,736	0/0:20,0:20:60.20:0,60,778	0/0:23,0:23:63.20:0,63,817	0/0:26,0:24:69.21:0,69,878	0/0:20,0:17:39.13:0,39,506	0/0:27,0:26:60.18:0,60,764	0/0:22,0:19:48.16:0,48,623	0/0:22,0:17:48.16:0,48,623	0/0:22,0:21:57.66:0,58,740	0/0:25,0:24:63.17:0,63,789	0/0:18,0:17:42.14:0,42,542	0/0:22,0:21:63.19:0,63,802	0/0:21,0:20:51.17:0,51,661	0/0:23,0:23:63.20:0,63,813	0/0:23,0:21:63.20:0,63,817	0/0:31,0:27:69.16:0,69,874	0/0:9,0:6:15.05:0,15,195
chr10	65086826	.	GT	G	3073.52	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-4.639;DP=775;FS=16.285;HRun=4;HaplotypeScore=124.2579;InbreedingCoeff=0.9979;MQ=59.45;MQ0=42;MQRankSum=-0.430;QD=27.94;ReadPosRankSum=-5.478;VQSLOD=0.7111;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:62,0:61:99:0,169,2311	0/0:10,0:9:27.09:0,27,377	0/0:16,0:16:44.88:0,45,595	0/0:23,0:22:57.14:0,57,757	0/0:24,0:24:72.24:0,72,993	0/0:22,0:19:51.17:0,51,699	0/0:25,0:21:57.14:0,57,775	1/1:20,90:100:99:3168,196,0	0/0:52,0:50:99:0,132,1714	0/0:32,0:29:87.28:0,87,1197	0/0:19,0:16:45.14:0,45,604	0/0:24,0:22:63.21:0,63,881	0/0:19,0:19:57.19:0,57,784	0/0:31,0:27:78.22:0,78,1056	0/0:21,0:20:54.18:0,54,756	0/0:20,0:16:48.10:0,48,634	0/0:39,0:34:96.30:0,96,1310	0/0:26,0:23:48.12:0,48,650	0/0:23,0:19:51.11:0,51,660	0/0:17,0:12:30.10:0,30,419	0/0:25,0:24:69.23:0,69,952	0/0:21,0:19:48.12:0,48,630	0/0:13,0:12:36.12:0,36,500	0/0:25,0:25:72.22:0,72,990	0/0:17,0:13:36.10:0,36,471	0/0:21,0:16:48.16:0,48,665	0/0:26,0:21:57.19:0,57,787	0/0:12,0:11:33.11:0,33,455
chr10	65086844	.	G	GT	14755.45	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-13.838;DP=790;FS=2.398;HRun=0;HaplotypeScore=90.5595;InbreedingCoeff=0.9988;MQ=55.37;MQ0=40;MQRankSum=-2.970;QD=33.92;ReadPosRankSum=5.114;VQSLOD=4.3776;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:56,4:60:27.89:0,28,2119	1/1:0,10:8:24.08:383,24,0	0/0:14,0:10:27.09:0,27,378	0/0:25,0:17:41.29:0,41,602	0/0:24,0:24:72.24:0,72,1000	1/1:0,18:16:42.14:670,42,0	1/1:0,19:16:45.15:719,45,0	0/0:114,2:111:99:0,226,3860	0/0:54,0:53:99:0,144,2006	1/1:0,25:22:63.19:946,63,0	1/1:1,23:16:42.14:671,42,0	1/1:2,21:20:51.17:813,51,0	0/0:18,0:18:54.16:0,54,736	1/1:1,28:25:66.23:1054,66,0	1/1:0,19:18:48.16:754,48,0	1/1:1,26:21:60.20:957,60,0	1/1:0,44:38:96.33:1531,96,0	1/1:2,22:22:48.16:766,48,0	1/1:0,13:9:27.07:386,27,0	1/1:0,18:10:24.08:383,24,0	1/1:3,25:27:72.24:1138,72,0	1/1:1,19:16:48.16:756,48,0	0/0:15,0:15:45.08:0,45,588	0/0:29,0:29:87.27:0,87,1197	1/1:0,18:14:36.12:563,36,0	1/1:1,25:18:51.15:780,51,0	1/1:2,29:26:63.21:1005,63,0	1/1:4,13:14:30.10:479,30,0
chr10	65087177	.	GTGTGTGTA	G	32.70	PASS	AB=0.926;AC=4;AF=0.071;AN=56;BaseQRankSum=6.874;DP=965;FS=0.964;HRun=0;HaplotypeScore=246.9195;InbreedingCoeff=0.3237;MQ=48.58;MQ0=70;MQRankSum=-2.432;QD=0.33;ReadPosRankSum=-2.145;VQSLOD=2.0231;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:10:4.28:23,4,0	0/0:12,0:11:8.74:0,9,691	0/0:54,0:21:53.83:0,54,501	0/0:32,0:14:29.88:0,30,264	0/0:28,0:26:60.79:0,61,541	0/0:26,1:25:28.96:0,29,877	0/0:36,0:33:92.59:0,93,1528	0/1:20,0:5:26.91:58,0,27	0/0:32,0:19:10.73:0,11,198	0/1:48,0:53:55.28:55,0,2877	0/0:20,0:18:45.05:0,45,909	0/0:38,0:32:75.05:0,75,1986	0/0:28,0:28:59.88:0,60,1335	0/0:34,12:44:65.84:0,66,1652	0/0:46,0:46:56.01:0,56,2132	0/0:54,0:50:99:0,111,2766	0/0:37,0:33:45.57:0,46,2303	0/0:33,0:29:71.92:0,72,1586	0/0:21,0:17:41.44:0,41,697	0/0:39,0:34:68.10:0,68,2413	0/0:56,0:55:99:0,144,3089	0/0:38,0:37:95.77:0,96,2964	0/0:22,0:22:56.42:0,56,1470	0/0:31,0:29:71.96:0,72,1469	0/0:23,0:19:45.02:0,45,785	0/0:46,0:43:71.27:0,71,3018	0/0:36,0:33:80.80:0,81,1680	0/0:19,0:16:42.09:0,42,1477
chr10	65087181	.	GTGTA	G	420.78	PASS	AB=0.963;AC=13;AF=0.250;AN=52;BaseQRankSum=8.239;DP=1002;FS=5.180;HRun=0;HaplotypeScore=206.8519;InbreedingCoeff=0.0417;MQ=47.96;MQ0=77;MQRankSum=-2.083;QD=1.06;ReadPosRankSum=-4.944;VQSLOD=0.7761;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:12:9.72:74,10,0	0/0:16,0:11:18.03:0,18,328	./.	./.	1/1:16,12:27:20.44:326,20,0	0/1:29,0:27:5.27:5,0,396	0/0:39,1:37:2.93:0,3,577	0/1:30,0:8:17:40,0,17	0/1:36,0:23:7.76:8,0,134	0/1:59,0:55:29.53:30,0,1254	0/1:21,3:20:16.58:17,0,332	0/0:38,0:32:51.09:0,51,1003	0/1:26,3:29:13.80:14,0,574	0/0:47,0:46:38.08:0,38,766	0/0:49,0:48:0.26:0,0,858	0/0:52,1:50:12.48:0,12,1149	0/0:37,0:33:42.58:0,43,1136	0/0:32,0:28:39.04:0,39,681	0/0:23,0:19:18.01:0,18,290	0/0:40,0:34:58.36:0,58,1157	0/1:62,0:61:26.79:27,0,1210	0/0:43,0:39:44.99:0,45,1317	0/0:21,1:22:30.08:0,30,635	0/0:30,0:28:30.07:0,30,563	0/1:25,2:19:22.57:23,0,285	0/1:47,3:45:11.07:11,0,1320	0/0:37,0:34:17.59:0,18,621	0/0:20,0:16:36.11:0,36,801
chr10	65087231	.	CTG	C	127.18	PASS	AB=0.674;AC=2;AF=0.036;AN=56;BaseQRankSum=4.429;DP=1249;FS=3.159;HRun=0;HaplotypeScore=196.7487;InbreedingCoeff=-0.0421;MQ=48.59;MQ0=111;MQRankSum=-1.582;QD=1.38;ReadPosRankSum=-0.364;VQSLOD=2.4637;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:18,27:37:99:159,0,135	0/0:32,0:28:66.21:0,66,1142	0/0:37,0:2:6.02:0,6,102	0/0:29,0:7:11.87:0,12,150	0/0:27,0:25:45.14:0,45,762	0/0:35,0:34:36.03:0,36,639	0/0:53,0:46:66.19:0,66,1137	0/0:69,0:27:62.40:0,62,708	0/1:29,18:39:56.75:57,0,505	0/0:76,0:69:99:0,208,3489	0/0:39,0:36:75.24:0,75,1297	0/0:43,0:41:66.23:0,66,1168	0/0:34,0:34:57.15:0,57,918	0/0:53,0:52:84.08:0,84,1359	0/0:47,0:45:69.12:0,69,1195	0/0:47,0:47:93.30:0,93,1616	0/0:45,0:42:81.22:0,81,1394	0/0:25,0:22:48.16:0,48,851	0/0:19,0:14:30.02:0,30,464	0/0:57,0:52:99:0,132,2265	0/0:103,0:97:99:0,156,2671	0/0:68,0:64:99:0,147,2486	0/0:23,0:23:54.17:0,54,928	0/0:28,0:26:63.22:0,63,1105	0/0:40,0:35:81.27:0,81,1434	0/0:59,0:53:99:0,153,2525	0/0:46,0:45:74.79:0,75,1198	0/0:22,0:22:45.11:0,45,764
chr10	65087443	.	GAC	G	107.38	PASS	AB=0.789;AC=4;AF=0.071;AN=56;BaseQRankSum=5.384;DP=987;FS=4.201;HRun=0;HaplotypeScore=163.2328;InbreedingCoeff=0.4725;MQ=71.58;MQ0=76;MQRankSum=-2.604;QD=1.95;ReadPosRankSum=-1.160;VQSLOD=2.5310;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:4,21:10:7.81:126,8,0	0/0:15,0:15:45.15:0,45,807	0/0:35,0:35:80.48:0,80,1617	0/0:34,0:34:66.18:0,66,1634	0/0:23,0:23:57.20:0,57,1042	0/0:22,6:22:63.20:0,63,1123	0/0:49,7:48:99:0,126,2269	0/0:136,0:122:99:0,283,5082	0/1:6,8:4:45.96:77,0,46	0/0:43,1:41:99:0,114,2026	0/0:22,0:22:54.19:0,54,986	0/0:32,2:32:93.27:0,93,1639	0/0:31,0:31:93.31:0,93,1666	0/0:37,6:39:65.51:0,66,1845	0/0:41,6:42:83.54:0,84,2169	0/0:30,8:29:78.27:0,78,1429	0/0:39,3:39:99:0,111,1994	0/0:20,1:20:54.18:0,54,975	0/0:25,3:24:60.18:0,60,1040	0/0:28,0:28:81.26:0,81,1425	0/0:54,2:54:99:0,147,2663	0/0:23,0:23:51.17:0,51,931	0/0:23,0:23:69.22:0,69,1226	0/0:43,0:42:99:0,123,2254	0/1:15,1:16:0.72:1,0,640	0/0:28,4:29:62.32:0,62,1436	0/0:34,4:35:53.47:0,53,1615	0/0:12,0:12:27.09:0,27,494
chr10	65087545	.	C	CA	42265.42	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-4.766;DP=1212;FS=38.147;HRun=1;HaplotypeScore=121.6593;InbreedingCoeff=0.9263;MQ=54.35;MQ0=90;MQRankSum=-3.512;QD=39.17;ReadPosRankSum=1.900;VQSLOD=1.9925;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,71:67:99:2827,178,0	1/1:0,34:31:90.31:1437,90,0	0/0:20,0:9:0.90:0,1,211	0/0:15,0:7:5.92:0,6,156	0/0:18,0:17:39.13:0,39,537	1/1:1,43:41:99:1628,102,0	1/1:1,44:43:99:1774,111,0	1/1:5,66:53:99:2217,141,0	1/1:1,22:10:18.06:286,18,0	1/1:1,58:50:99:2310,150,0	1/1:0,19:18:45.15:719,45,0	1/1:0,57:56:99:2395,151,0	0/0:30,0:30:63.21:0,63,858	1/1:0,53:51:99:2347,148,0	1/1:0,63:63:99:2825,178,0	1/1:0,43:41:99:1914,120,0	1/1:0,63:59:99:2636,166,0	1/1:0,47:46:99:2014,126,0	1/1:4,25:23:51.15:783,51,0	1/1:2,41:39:96.33:1519,96,0	1/1:6,78:84:99:3643,232,0	1/1:0,50:44:99:2029,129,0	0/0:19,0:19:42.14:0,42,585	0/0:31,0:31:78.26:0,78,1089	1/1:4,36:36:81.28:1293,81,0	1/1:2,49:50:99:2220,144,0	1/1:0,54:53:99:2251,141,0	1/1:0,30:29:75.26:1199,75,0
chr10	65088084	.	GT	G	744.92	PASS	AB=0.782;AC=8;AF=0.148;AN=54;BaseQRankSum=9.945;DP=764;FS=15.265;HRun=3;HaplotypeScore=161.3290;InbreedingCoeff=-0.1662;MQ=48.64;MQ0=51;MQRankSum=-8.056;QD=3.50;ReadPosRankSum=1.393;VQSLOD=-0.7018;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:33:96.28:0,96,1352	0/1:9,3:10:9.98:10,0,294	0/1:28,0:8:5.45:5,0,233	0/0:28,0:16:41.53:0,42,496	0/0:15,0:15:30.10:0,30,426	0/0:15,0:11:30.09:0,30,407	0/0:36,0:34:96.24:0,96,1293	0/0:97,0:80:99:0,223,3048	./.	0/1:33,6:32:60.45:60,0,923	0/1:14,12:23:99:204,0,340	0/0:20,0:17:45.14:0,45,629	0/0:31,0:31:93.28:0,93,1299	0/0:26,0:23:63.17:0,63,876	0/0:30,0:23:69.16:0,69,931	0/0:34,0:29:87.25:0,87,1192	0/0:25,0:25:69.19:0,69,951	0/0:17,0:17:51.17:0,51,734	0/0:22,0:22:54.14:0,54,753	0/1:27,14:33:99:126,0,737	0/0:28,0:27:75.21:0,75,1055	0/1:24,6:25:39.01:39,0,702	0/0:21,0:21:57.08:0,57,765	0/0:29,0:29:81.23:0,81,1142	0/1:15,13:24:99:307,0,411	0/0:26,2:21:23.17:0,23,763	0/0:13,0:10:27.09:0,27,382	0/1:4,5:8:99:124,0,148
chr10	65088110	.	G	GT	752.94	PASS	AB=0.660;AC=5;AF=0.089;AN=56;BaseQRankSum=9.496;DP=646;FS=3.344;HRun=1;HaplotypeScore=167.8772;InbreedingCoeff=-0.1081;MQ=55.96;MQ0=29;MQRankSum=-7.639;QD=7.84;ReadPosRankSum=1.439;VQSLOD=1.0697;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:30:78.26:0,78,1089	0/1:6,4:8:45.81:46,0,226	0/0:24,0:16:22.96:0,23,401	0/0:44,0:23:6.02:0,6,359	0/0:12,0:12:24.04:0,24,309	0/0:14,0:10:30.10:0,30,411	0/0:19,0:17:51.07:0,51,655	0/0:91,0:79:99:0,217,2978	0/0:3,0:2:6.02:0,6,76	0/0:25,2:24:32.93:0,33,864	0/1:8,13:16:99:231,0,111	0/0:13,0:11:24.07:0,24,318	0/0:21,0:20:60.18:0,60,804	0/0:23,0:21:60.08:0,60,774	0/0:25,0:19:54.11:0,54,729	0/0:18,0:16:48.16:0,48,670	0/0:16,0:16:45.01:0,45,580	0/0:13,0:13:39.13:0,39,540	0/0:24,0:22:63.19:0,63,851	0/1:19,12:22:99:141,0,349	0/0:21,1:21:49.26:0,49,739	0/0:23,5:22:13.75:0,14,585	0/0:17,0:17:45.14:0,45,610	0/0:29,0:29:84.25:0,84,1152	0/1:16,13:26:99:339,0,471	0/0:20,2:17:9.80:0,10,590	0/0:12,0:9:25.33:0,25,337	0/1:1,4:4:22.69:113,0,23
chr10	65088112	.	C	CTT	378.38	PASS	AB=0.978;AC=7;AF=0.125;AN=56;BaseQRankSum=9.510;DP=645;FS=3.549;HRun=2;HaplotypeScore=180.9682;InbreedingCoeff=0.1545;MQ=56.91;MQ0=26;MQRankSum=-5.443;QD=2.66;ReadPosRankSum=1.596;VQSLOD=-0.5099;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:30:81.17:0,81,1090	0/1:10,0:8:5.51:6,0,235	0/0:27,0:20:42.41:0,42,506	0/1:45,0:24:7.40:7,0,425	0/0:10,0:10:18.06:0,18,265	0/0:14,0:10:27.09:0,27,388	0/0:19,0:17:33.11:0,33,477	0/0:91,0:80:99:0,204,2931	0/0:3,0:2:3.01:0,3,44	0/0:24,0:22:50.03:0,50,904	0/1:20,1:15:99:145,0,102	0/0:11,0:10:21.06:0,21,285	0/0:19,0:18:51.17:0,51,743	0/0:22,0:20:48.16:0,48,695	0/0:25,0:19:54.18:0,54,782	0/0:18,0:17:48.16:0,48,702	0/0:16,0:16:39.13:0,39,565	0/0:13,0:13:33.08:0,33,461	0/0:26,0:24:66.15:0,66,917	0/1:31,0:22:41.58:42,0,347	0/0:21,1:21:43.16:0,43,696	0/0:28,0:22:27.25:0,27,550	0/0:18,0:18:48.15:0,48,683	0/0:29,0:29:84.28:0,84,1226	0/1:27,2:26:99:186,0,460	0/0:22,0:17:45.15:0,45,649	0/0:11,0:8:24.08:0,24,342	1/1:2,3:4:9.03:119,9,0
chr10	65088114	.	TCCCCC	T	729.12	PASS	AB=0.717;AC=6;AF=0.107;AN=56;BaseQRankSum=8.486;DP=629;FS=2.556;HRun=5;HaplotypeScore=202.5375;InbreedingCoeff=0.1734;MQ=56.36;MQ0=24;MQRankSum=-7.331;QD=8.10;ReadPosRankSum=2.192;VQSLOD=-0.6927;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:29:84.05:0,84,1569	0/1:6,3:8:69.26:69,0,353	0/0:32,0:21:44.15:0,44,1308	0/0:42,0:24:42.87:0,43,1149	0/0:10,0:10:18.06:0,18,493	0/0:13,0:10:27.01:0,27,548	0/0:16,0:14:36.04:0,36,745	0/0:86,0:77:99:0,208,5560	0/0:3,0:2:3.01:0,3,84	0/0:22,2:22:18.68:0,19,1365	0/1:9,9:13:99:194,0,218	0/0:14,0:12:30.09:0,30,568	0/0:19,0:18:54.12:0,54,1490	0/0:21,0:19:51.17:0,51,1093	0/0:25,0:19:57.17:0,57,1145	0/0:17,0:17:51.18:0,51,1192	0/0:16,0:16:42.08:0,42,841	0/0:12,0:12:33.08:0,33,733	0/0:26,0:24:69.18:0,69,1487	0/1:18,12:22:99:212,0,620	0/0:21,0:20:45.15:0,45,984	0/0:23,4:22:5.52:0,6,914	0/0:17,0:17:48.13:0,48,1507	0/0:30,0:30:87.20:0,87,2548	0/1:18,10:25:99:331,0,898	0/0:20,1:16:45.09:0,45,840	0/0:11,0:8:24.08:0,24,520	1/1:4,1:4:8.15:47,8,0
chr10	65088120	.	TC	T	6531.72	PASS	AC=38;AF=0.704;AN=54;BaseQRankSum=8.833;DP=614;FS=46.669;HRun=7;HaplotypeScore=145.8092;InbreedingCoeff=0.9601;MQ=58.14;MQ0=18;MQRankSum=-7.110;QD=18.40;ReadPosRankSum=5.519;VQSLOD=1.5356;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,18:25:48.10:487,48,0	1/1:4,2:8:17.10:134,17,0	0/0:40,0:25:41.65:0,42,582	0/0:51,1:28:55.28:0,55,574	0/0:10,0:10:15:0,15,167	1/1:5,8:10:18.03:184,18,0	1/1:3,11:12:27.02:264,27,0	0/0:80,0:74:99:0,175,1243	0/0:4,0:3:2.96:0,3,19	1/1:6,14:20:47.47:465,47,0	1/1:4,4:12:16.09:97,16,0	1/1:3,8:11:21.03:206,21,0	0/0:19,0:18:33.06:0,33,357	1/1:3,16:18:48.10:486,48,0	1/1:6,16:16:48.11:486,48,0	1/1:1,16:17:48.10:489,48,0	1/1:3,13:16:39.08:392,39,0	1/1:3,8:11:24.05:244,24,0	1/1:1,25:24:65.82:653,66,0	1/1:8,10:22:37.10:292,37,0	1/1:4,14:17:35.85:367,36,0	1/1:7,16:22:47.68:460,48,0	0/0:17,0:17:45.09:0,45,525	0/0:32,0:32:78.18:0,78,925	1/1:7,11:25:43.16:312,43,0	1/1:7,9:13:27.05:271,27,0	1/1:4,7:8:24.05:244,24,0	./.
chr10	65088136	.	CCTCT	C	9228.40	PASS	AB=0.893;AC=40;AF=0.741;AN=54;BaseQRankSum=7.268;DP=612;FS=36.813;HRun=0;HaplotypeScore=158.4276;InbreedingCoeff=0.7139;MQ=58.68;MQ0=29;MQRankSum=-8.934;QD=18.57;ReadPosRankSum=3.573;VQSLOD=2.9662;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,13:17:27.09:463,27,0	1/1:0,11:10:27.09:457,27,0	0/0:39,0:22:10.55:0,11,657	0/1:64,0:32:42.36:42,0,552	0/0:9,0:9:24.08:0,24,552	1/1:5,6:8:12.04:206,12,0	1/1:7,10:16:21.06:331,21,0	0/1:51,11:63:99:220,0,212	0/0:2,0:2:2.92:0,3,17	1/1:7,23:25:56.68:882,57,0	1/1:8,12:14:21.07:340,21,0	1/1:2,4:6:12.04:206,12,0	0/0:12,0:12:27.09:0,27,622	1/1:9,10:19:36.07:558,36,0	1/1:5,16:18:33.11:566,33,0	1/1:6,8:14:27.09:461,27,0	1/1:4,10:13:18.53:296,19,0	1/1:10,1:10:3.01:51,3,0	1/1:12,11:22:33.11:565,33,0	1/1:10,24:27:51.16:817,51,0	1/1:9,10:15:11.93:205,12,0	1/1:7,24:26:60.19:958,60,0	0/0:16,0:16:39.13:0,39,900	0/0:31,0:35:78.01:0,78,1769	1/1:6,21:22:42.14:716,42,0	1/1:4,15:18:39.12:606,39,0	1/1:4,7:10:18.05:281,18,0	./.
chr10	65088725	.	C	CT	49	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.333;DP=711;FS=13.300;HRun=0;HaplotypeScore=71.3993;InbreedingCoeff=0.9081;MQ=53.88;MQ0=29;MQRankSum=-3.185;QD=1.40;ReadPosRankSum=-1.396;VQSLOD=0.5560;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:51:99:0,126,1712	0/0:9,0:9:24.08:0,24,335	0/0:31,0:17:45.13:0,45,587	0/0:20,0:11:30.10:0,30,420	0/0:29,0:29:63.17:0,63,857	0/0:45,0:41:99:0,105,1436	0/0:30,0:30:72.14:0,72,959	1/1:13,22:10:12.01:135,12,0	0/0:15,0:15:23.73:0,24,310	0/0:22,0:20:57.18:0,57,778	0/0:16,0:15:39.06:0,39,520	0/0:23,0:20:57.19:0,57,796	0/0:19,0:19:51.17:0,51,710	0/0:29,0:25:69.16:0,69,940	0/0:29,0:28:81.26:0,81,1112	0/0:11,0:10:27.09:0,27,377	0/0:39,0:39:96.18:0,96,1259	0/0:22,0:22:54.17:0,54,739	0/0:29,0:27:81.26:0,81,1111	0/0:22,0:20:54.18:0,54,751	0/0:37,0:37:99:0,102,1404	0/0:18,0:17:30.05:0,30,392	0/0:20,0:20:48.12:0,48,649	0/0:20,0:20:51.14:0,51,708	0/0:23,0:21:48.16:0,48,670	0/0:32,0:30:84.25:0,84,1146	0/0:28,0:26:75.21:0,75,1023	0/0:5,0:5:9.03:0,9,126
chr10	65089382	.	CA	C	2702.19	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=12.079;DP=776;FS=3.442;HRun=1;HaplotypeScore=91.2473;InbreedingCoeff=0.9789;MQ=58.58;MQ0=39;MQRankSum=-10.665;QD=32.95;ReadPosRankSum=-5.331;VQSLOD=1.8162;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,114,1770	0/0:12,0:12:30.10:0,30,451	0/0:17,0:9:23.64:0,24,278	0/0:17,0:6:15.02:0,15,173	0/0:15,0:15:45.14:0,45,695	0/0:25,0:24:60.17:0,60,912	0/0:23,0:22:51.17:0,51,815	1/1:0,82:72:99:2797,214,0	0/0:30,0:30:87.30:0,87,1390	0/0:38,0:35:99:0,105,1653	0/0:18,0:18:45.08:0,45,674	0/0:33,0:33:90.25:0,90,1363	0/0:23,0:23:69.24:0,69,1102	0/0:21,0:21:60.20:0,60,955	0/0:28,0:26:75.23:0,75,1144	0/0:18,0:18:51.17:0,51,815	0/0:43,0:41:99:0,108,1677	0/0:30,0:30:78.22:0,78,1219	0/0:23,0:19:57.19:0,57,910	0/0:19,0:15:30.10:0,30,479	0/0:55,0:55:99:0,153,2421	0/0:21,0:17:36.05:0,36,536	0/0:11,0:11:33.06:0,33,497	0/0:34,0:34:99:0,99,1550	0/0:26,0:22:51.17:0,51,814	0/0:36,0:34:99:0,102,1603	0/0:25,0:25:75.24:0,75,1168	0/0:8,0:8:24.08:0,24,384
chr10	65089506	.	GA	G	1397.45	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=9.367;DP=710;FS=2.838;HRun=4;HaplotypeScore=63.1738;InbreedingCoeff=0.8043;MQ=55.56;MQ0=56;MQRankSum=-10.295;QD=21.84;ReadPosRankSum=-4.399;VQSLOD=2.1107;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:42:99:0,114,1556	0/0:12,0:12:33.10:0,33,445	0/0:27,0:4:2.99:0,3,23	0/0:24,0:7:8.39:0,8,86	0/0:21,0:20:48.16:0,48,671	0/0:20,0:20:48.16:0,48,672	0/0:25,0:25:60.20:0,60,839	1/1:5,59:51:99:1492,126,0	0/0:32,0:32:90.28:0,90,1241	0/0:36,0:30:87.28:0,87,1188	0/0:23,0:21:51.17:0,51,713	0/0:33,0:33:87.08:0,87,1218	0/0:26,0:26:69.23:0,69,966	0/0:17,0:17:51.17:0,51,711	0/0:20,0:20:54.18:0,54,756	0/0:17,0:17:51.17:0,51,714	0/0:24,0:24:63.14:0,63,838	0/0:21,0:21:60.20:0,60,840	0/0:13,0:11:33.11:0,33,462	0/0:20,0:16:36.12:0,36,504	0/0:33,0:32:84.25:0,84,1156	0/0:17,0:17:33.11:0,33,458	0/0:15,0:15:36.12:0,36,504	0/0:34,0:34:93.26:0,93,1264	0/0:27,0:25:57.19:0,57,796	0/0:23,0:21:63.18:0,63,833	0/0:25,0:25:72.24:0,72,1007	0/0:17,0:15:45.15:0,45,626
chr10	65090320	.	AACAC	A	375.58	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=2.021;DP=776;FS=2.348;HRun=0;HaplotypeScore=151.5965;InbreedingCoeff=0.6493;MQ=55.33;MQ0=19;MQRankSum=0.211;QD=6.83;ReadPosRankSum=0.298;VQSLOD=2.6779;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:37:54.11:0,54,1024	0/0:9,0:9:18.06:0,18,419	0/1:26,0:9:0.51:1,0,183	0/0:28,0:13:10.51:0,11,108	0/0:35,0:35:77.87:0,78,1606	0/0:25,0:25:51.05:0,51,1054	0/0:31,0:30:43.79:0,44,706	0/0:61,0:46:8.99:0,9,181	1/1:4,25:29:27.09:469,27,0	0/0:26,0:25:59.68:0,60,1217	0/0:18,0:16:39.12:0,39,768	0/0:25,0:25:54.14:0,54,1155	0/0:25,0:25:72.25:0,72,1594	0/0:23,0:23:51.17:0,51,1086	0/0:29,0:29:60.26:0,60,1207	0/0:22,1:23:4.97:0,5,1093	0/0:30,0:29:69.17:0,69,1275	0/0:23,0:22:38.94:0,39,705	0/0:18,0:17:45.11:0,45,786	0/0:22,0:20:51.07:0,51,1023	0/0:55,0:52:92.96:0,93,1776	0/0:29,0:29:38.05:0,38,814	0/0:25,0:26:72:0,72,1529	0/0:28,0:28:72.15:0,72,1413	0/0:20,0:19:21.06:0,21,396	0/0:32,0:32:78.14:0,78,1395	0/0:27,0:26:54.16:0,54,1098	0/0:11,0:11:27.07:0,27,561
chr10	65090336	.	T	TAC	8515.04	PASS	AB=0.619;AC=32;AF=0.571;AN=56;BaseQRankSum=-10.804;DP=799;FS=4.492;HRun=0;HaplotypeScore=102.1331;InbreedingCoeff=0.2154;MQ=55.89;MQ0=20;MQRankSum=2.306;QD=14.05;ReadPosRankSum=4.008;VQSLOD=4.4272;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:16,26:40:5.17:364,0,5	1/1:1,10:11:15.05:236,15,0	0/0:24,0:4:5.91:0,6,51	0/0:32,0:9:8.79:0,9,53	0/0:28,0:28:51.15:0,51,595	1/1:8,16:25:25.58:509,26,0	0/1:13,22:35:26.75:84,0,27	1/1:56,0:39:8.95:76,9,0	0/0:29,0:29:37.92:0,38,418	1/1:7,21:28:19.48:735,19,0	1/1:5,16:20:29.59:433,30,0	1/1:6,16:22:1.45:484,1,0	0/0:26,0:26:60.14:0,60,672	0/1:10,16:26:31.53:347,0,32	0/1:12,19:31:33.53:436,0,34	0/1:5,23:28:39.93:564,0,40	1/1:12,22:34:36.12:566,36,0	0/1:10,8:17:19.23:176,0,19	0/1:12,9:21:26.11:270,0,26	1/1:5,18:21:36.12:566,36,0	0/1:21,33:51:87.86:533,0,88	0/1:8,23:32:4.07:427,0,4	0/0:24,0:25:60.87:0,61,669	0/0:28,0:29:60.01:0,60,679	0/1:7,15:21:17.28:183,0,17	1/1:11,20:31:43.37:803,43,0	1/1:8,19:27:1.52:440,2,0	1/1:2,12:14:18.06:283,18,0
chr10	65090702	.	T	TG	2718.29	PASS	AB=0.905;AC=3;AF=0.054;AN=56;BaseQRankSum=0.506;DP=661;FS=35.281;HRun=2;HaplotypeScore=73.3892;InbreedingCoeff=0.6745;MQ=57.11;MQ0=2;MQRankSum=-12.388;QD=27.18;ReadPosRankSum=-5.416;VQSLOD=0.3346;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:84.27:0,84,1091	0/0:10,0:10:30.10:0,30,390	0/0:21,0:12:33.11:0,33,428	0/1:17,1:13:9.01:9,0,361	0/0:27,0:27:78.25:0,78,1013	0/0:21,0:21:57.19:0,57,740	0/0:28,0:28:84.26:0,84,1075	1/1:16,65:76:99:2811,193,0	0/0:25,0:25:75.23:0,75,959	0/0:16,0:16:48.12:0,48,605	0/0:23,0:23:63.19:0,63,803	0/0:13,0:13:36.10:0,36,452	0/0:10,0:10:30.10:0,30,389	0/0:23,0:22:66.20:0,66,843	0/0:23,0:23:63.20:0,63,818	0/0:22,0:22:66.20:0,66,843	0/0:35,1:36:54.37:0,54,1196	0/0:27,0:27:81.26:0,81,1053	0/0:10,0:9:27.09:0,27,350	0/0:21,0:21:63.20:0,63,818	0/0:32,0:32:96.29:0,96,1230	0/0:14,0:14:42.14:0,42,545	0/0:27,0:27:75.24:0,75,974	0/0:18,0:18:51.15:0,51,647	0/0:17,0:17:51.15:0,51,647	0/0:28,0:28:84.26:0,84,1076	0/0:20,0:20:57.18:0,57,739	0/0:21,0:21:63.20:0,63,818
chr10	65090741	.	T	TG	2199.90	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=10.558;DP=627;FS=33.956;HRun=1;HaplotypeScore=67.1442;InbreedingCoeff=0.9944;MQ=61.15;MQ0=3;MQRankSum=-11.676;QD=36.67;ReadPosRankSum=-5.538;VQSLOD=0.1782;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:75.24:0,75,974	0/0:9,0:9:24.08:0,24,312	0/0:17,0:14:39.12:0,39,491	0/0:20,0:12:31.58:0,32,342	0/0:28,0:27:78.24:0,78,998	0/0:20,0:20:57.17:0,57,725	0/0:22,0:22:66.20:0,66,841	1/1:11,49:58:99:2295,156,0	0/0:24,0:24:72.23:0,72,933	0/0:16,0:16:48.16:0,48,623	0/0:28,0:27:81.25:0,81,1037	0/0:16,0:16:45.15:0,45,584	0/0:9,0:9:24.08:0,24,312	0/0:15,0:15:45.15:0,45,584	0/0:22,0:22:66.19:0,66,829	0/0:20,0:20:57.17:0,57,727	0/0:41,0:41:99:0,120,1554	0/0:25,1:26:33.32:0,33,932	0/0:19,0:18:54.18:0,54,701	0/0:28,0:28:84.26:0,84,1077	0/0:20,0:20:60.20:0,60,779	0/0:11,0:11:30.10:0,30,390	0/0:22,0:22:63.18:0,63,790	0/0:12,0:12:36.12:0,36,467	0/0:29,0:29:81.24:0,81,1036	0/0:30,0:30:84.27:0,84,1090	0/0:26,0:26:78.23:0,78,984	0/0:12,0:11:33.11:0,33,428
chr10	65090799	.	AG	A	1085.79	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=9.580;DP=606;FS=36.033;HRun=1;HaplotypeScore=70.4576;InbreedingCoeff=0.7490;MQ=71.86;MQ0=2;MQRankSum=-5.480;QD=19.74;ReadPosRankSum=-4.173;VQSLOD=1.0407;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,102,1450	0/0:12,0:12:36.11:0,36,508	0/0:42,1:25:57.36:0,57,722	0/0:35,0:16:15.49:0,15,188	0/0:31,0:31:93.29:0,93,1337	0/0:24,0:24:69.23:0,69,1009	0/0:12,0:12:36.09:0,36,486	1/1:17,38:43:97.51:1180,98,0	0/0:18,0:18:51.17:0,51,746	0/0:17,0:17:49.05:0,49,704	0/0:24,0:24:72.20:0,72,991	0/0:18,0:18:54.16:0,54,750	0/0:12,0:12:36.11:0,36,506	0/0:14,0:14:42.14:0,42,614	0/0:17,0:17:51.16:0,51,727	0/0:24,0:24:72.23:0,72,1034	0/0:34,0:34:99:0,99,1378	0/0:11,1:12:4.65:0,5,410	0/0:19,0:19:51.15:0,51,706	0/0:16,0:16:48.13:0,48,664	0/0:1,0:1:3.01:0,3,44	0/0:7,0:7:21.07:0,21,306	0/0:18,0:18:54.14:0,54,732	0/0:12,0:12:36.09:0,36,487	0/0:30,0:30:90.29:0,90,1298	0/0:30,0:30:90.29:0,90,1285	0/0:27,0:27:81.26:0,81,1164	0/0:8,0:8:24.07:0,24,331
chr10	65091398	.	TG	T	3046.16	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=11.243;DP=858;FS=13.088;HRun=2;HaplotypeScore=98.8152;InbreedingCoeff=0.9976;MQ=65.69;MQ0=2;MQRankSum=-8.709;QD=23.43;ReadPosRankSum=-6.218;VQSLOD=0.9685;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,129,1852	0/0:12,0:12:36.12:0,36,539	0/0:21,0:20:57.11:0,57,751	0/0:29,1:30:52.64:0,53,981	0/0:36,0:36:99:0,108,1590	0/0:31,0:31:87.26:0,87,1261	0/0:18,0:18:54.18:0,54,805	1/1:31,99:124:23.62:3139,24,0	0/0:36,0:36:99:0,101,1358	0/0:32,0:32:96.30:0,96,1383	0/0:28,0:28:84.27:0,84,1234	0/0:30,0:30:90.30:0,90,1328	0/0:27,0:27:80.47:0,80,1155	0/0:25,0:25:74.54:0,75,1011	0/0:33,0:32:94.72:0,95,1324	0/0:37,0:37:99:0,111,1579	0/0:29,0:29:63.27:0,63,1106	0/0:23,0:23:63.16:0,63,896	0/0:29,0:29:83.49:0,83,1196	0/0:19,0:19:57.18:0,57,827	0/0:36,0:36:99:0,102,1524	0/0:22,0:22:63.19:0,63,902	0/0:19,0:19:57.19:0,57,850	0/0:24,0:24:72.14:0,72,1009	0/0:17,0:17:51.17:0,51,760	0/0:30,0:30:89.51:0,90,1310	0/0:26,0:26:77.70:0,78,1067	0/0:14,0:14:42.13:0,42,609
chr10	65091953	.	C	CA	1003.82	PASS	AB=0.686;AC=1;AF=0.018;AN=56;BaseQRankSum=0.170;DP=681;FS=4.408;HRun=4;HaplotypeScore=80.5710;InbreedingCoeff=-0.0195;MQ=58.70;MQ0=23;MQRankSum=-2.778;QD=12.39;ReadPosRankSum=-4.316;VQSLOD=1.0378;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:40:99:0,108,1223	0/0:6,0:6:15.04:0,15,170	0/0:24,0:11:27.02:0,27,284	0/0:26,0:9:25.22:0,25,231	0/0:20,0:19:54.11:0,54,585	0/0:14,0:14:33.09:0,33,374	0/0:31,0:30:87.25:0,87,986	0/1:44,37:72:99:1078,0,846	0/0:11,0:7:15.04:0,15,170	0/0:26,0:25:72.14:0,72,792	0/0:10,0:10:24.07:0,24,272	0/0:19,0:19:51.14:0,51,578	0/0:18,0:18:54.15:0,54,612	0/0:25,0:25:57.15:0,57,637	0/0:16,0:16:42.10:0,42,459	0/0:20,0:20:36.10:0,36,408	0/0:32,0:32:93.18:0,93,1009	0/0:21,0:21:54.15:0,54,612	0/0:18,0:16:45.13:0,45,510	0/0:14,0:14:36.10:0,36,408	0/0:54,0:50:99:0,114,1284	0/0:21,0:19:51.14:0,51,570	0/0:12,0:12:30.08:0,30,340	0/0:32,0:32:84.23:0,84,943	0/0:25,0:24:44.86:0,45,496	0/0:26,0:26:72.20:0,72,817	0/0:24,0:23:69.17:0,69,770	0/0:13,0:13:36.05:0,36,383
chr10	65091986	.	A	AGTGT	3876.04	PASS	AB=1.000;AC=42;AF=0.840;AN=50;BaseQRankSum=0.265;DP=703;FS=11.769;HRun=0;HaplotypeScore=131.9366;InbreedingCoeff=0.5553;MQ=54.68;MQ0=23;MQRankSum=-1.124;QD=6.69;ReadPosRankSum=-2.717;VQSLOD=1.4200;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:30,1:44:14.79:226,15,0	1/1:10,0:9:8.99:132,9,0	./.	./.	0/0:20,0:20:15.16:0,15,252	1/1:20,1:18:9.03:135,9,0	1/1:35,0:33:14.85:177,15,0	1/1:67,0:51:2.60:10,3,0	./.	1/1:29,1:29:22.56:257,23,0	1/1:8,1:8:3.01:30,3,0	1/1:13,5:20:3.48:72,3,0	0/1:18,0:18:3.88:6,0,4	1/1:23,0:22:17.39:253,17,0	1/1:16,0:16:17.78:244,18,0	1/1:13,11:25:14.34:184,14,0	1/1:31,1:32:20.98:470,21,0	1/1:21,1:22:20.69:345,21,0	0/1:18,0:17:5.19:5,0,12	1/1:18,0:17:8.62:88,9,0	1/1:72,0:69:22.06:306,22,0	1/1:19,0:17:9:120,9,0	0/0:13,0:13:6:0,6,68	0/0:27,0:28:24.10:0,24,392	1/1:12,9:22:5.61:82,6,0	1/1:23,0:23:30.70:384,31,0	1/1:17,0:17:10.12:104,10,0	1/1:9,4:14:12.04:247,12,0
chr10	65091989	.	G	GTGTG	3863.13	PASS	AB=1.000;AC=42;AF=0.808;AN=52;BaseQRankSum=0.167;DP=726;FS=11.742;HRun=0;HaplotypeScore=132.1162;InbreedingCoeff=0.5055;MQ=53.80;MQ0=25;MQRankSum=0.585;QD=6.41;ReadPosRankSum=-2.666;VQSLOD=1.5215;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:44,0:43:14.79:226,15,0	1/1:11,0:9:8.99:132,9,0	./.	./.	0/0:27,0:25:15.08:0,15,252	1/1:22,0:19:8.79:135,9,0	1/1:39,0:36:14.85:177,15,0	1/1:61,0:45:2.60:10,3,0	0/1:12,0:9:0:0,0,0	1/1:31,0:29:22.56:257,23,0	1/1:11,0:8:3.01:30,3,0	1/1:21,0:21:3.48:72,3,0	0/1:22,0:22:2.52:8,0,3	1/1:22,0:21:17.39:253,17,0	1/1:15,0:15:17.78:244,18,0	1/1:25,0:25:12.33:169,12,0	1/1:31,0:33:21.45:472,21,0	0/1:23,0:23:0.29:322,0,0	0/1:17,0:16:5.19:5,0,12	1/1:19,0:17:8.62:88,9,0	1/1:74,0:69:21.97:305,22,0	1/1:18,0:16:9:120,9,0	0/0:17,0:16:6:0,6,68	0/0:30,0:30:24.10:0,24,392	1/1:22,0:21:5.61:82,6,0	1/1:21,6:26:35.03:407,35,0	1/1:19,0:18:10.12:104,10,0	1/1:14,0:14:12.04:247,12,0
chr10	65092101	.	TGG	T	1075.33	PASS	AB=0.705;AC=1;AF=0.019;AN=54;BaseQRankSum=5.649;DP=725;FS=0.000;HRun=2;HaplotypeScore=92.6357;InbreedingCoeff=-0.0192;MQ=55.71;MQ0=32;MQRankSum=-4.076;QD=12.50;ReadPosRankSum=-2.612;VQSLOD=-0.3092;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,154,3065	0/0:6,0:6:18.06:0,18,366	0/0:25,0:9:27.05:0,27,506	0/0:32,0:12:30.10:0,30,588	0/0:24,0:24:72.25:0,72,1459	0/0:19,0:19:54.17:0,54,1060	0/0:19,0:19:57.20:0,57,1158	0/1:50,36:57:99:1150,0,1646	./.	0/0:27,0:26:78.27:0,78,1571	0/0:24,0:24:69.24:0,69,1401	0/0:31,0:31:93.32:0,93,1879	0/0:19,0:19:57.20:0,57,1144	0/0:19,0:18:54.19:0,54,1077	0/0:28,0:28:84.29:0,84,1706	0/0:32,0:32:96.33:0,96,1941	0/0:21,0:21:57.17:0,57,1118	0/0:14,0:14:42.14:0,42,850	0/0:17,0:12:36.12:0,36,719	0/0:24,0:24:69.24:0,69,1388	0/0:32,0:32:96.30:0,96,1867	0/0:22,0:22:63.22:0,63,1264	0/0:23,0:23:69.24:0,69,1390	0/0:51,0:51:99:0,151,3041	0/0:25,0:25:75.26:0,75,1523	0/0:23,0:23:66.23:0,66,1341	0/0:14,0:14:42.14:0,42,852	0/0:12,0:12:36.12:0,36,731
chr10	65093147	.	T	TC	1178.14	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.381;DP=693;FS=8.098;HRun=5;HaplotypeScore=80.9483;InbreedingCoeff=0.9880;MQ=67.10;MQ0=14;MQRankSum=-5.251;QD=19.31;ReadPosRankSum=-4.092;VQSLOD=2.0008;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:49:99:0,138,1451	0/0:7,0:7:21.03:0,21,215	0/0:40,0:37:99:0,105,1073	0/0:47,0:35:80.82:0,81,821	0/0:24,0:24:60.13:0,60,636	0/0:13,0:13:36.07:0,36,378	0/0:33,0:33:81.20:0,81,870	1/1:13,48:48:99:1273,105,0	0/0:19,0:19:54.13:0,54,580	0/0:13,0:13:30.07:0,30,322	0/0:9,0:9:27.07:0,27,288	0/0:27,0:27:75.15:0,75,794	0/0:25,0:25:69.15:0,69,731	0/0:24,0:24:60.14:0,60,645	0/0:28,0:28:84.21:0,84,901	0/0:14,0:14:42.11:0,42,451	0/0:28,0:27:78.20:0,78,838	0/0:23,0:22:57.10:0,57,599	0/0:15,0:15:42.05:0,42,438	0/0:19,0:19:51.13:0,51,548	0/0:42,0:42:99:0,109,1161	0/0:17,0:17:47.98:0,48,492	0/0:8,0:8:21.05:0,21,225	0/0:37,0:36:90.21:0,90,958	0/0:16,0:16:39.10:0,39,419	0/0:25,0:25:69.15:0,69,732	0/0:11,0:11:33.08:0,33,355	0/0:13,0:11:24.06:0,24,258
chr10	65093600	.	CT	C	2277.47	PASS	AB=0.739;AC=41;AF=0.732;AN=56;BaseQRankSum=3.944;DP=549;FS=3.576;HRun=16;HaplotypeScore=68.0934;InbreedingCoeff=0.1278;MQ=58.69;MQ0=9;MQRankSum=-0.599;QD=4.53;ReadPosRankSum=2.581;VQSLOD=1.5612;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:16,21:40:13.93:238,0,14	1/1:2,4:8:15.82:84,16,0	0/0:21,0:9:6.33:0,6,43	0/0:13,0:6:2.29:0,2,6	0/1:16,4:22:3.38:3,0,172	0/1:14,7:22:45.95:86,0,46	0/1:13,9:22:47.95:84,0,48	1/1:64,0:70:27.19:81,27,0	1/1:5,0:12:14.23:41,14,0	1/1:10,11:24:13.47:160,13,0	1/1:8,9:20:28.46:149,28,0	0/1:8,7:16:23.64:87,0,24	0/0:11,1:11:11.98:0,12,99	1/1:7,0:8:1.37:4,1,0	1/1:6,6:13:20.50:126,20,0	1/1:2,5:8:16.71:96,17,0	1/1:13,14:29:18.05:195,18,0	0/1:4,7:11:4.96:87,0,5	0/1:15,2:17:7.38:34,0,7	1/1:3,8:12:16.70:96,17,0	1/1:6,6:13:16.59:95,17,0	1/1:8,10:18:26.31:160,26,0	0/1:13,5:17:47.71:48,0,91	0/1:22,3:30:14.87:15,0,333	1/1:1,6:11:21.97:111,22,0	1/1:10,11:23:11.96:178,12,0	1/1:8,10:18:26.21:161,26,0	1/1:3,1:3:2.81:18,3,0
chr10	65093855	.	CTT	C	15554.65	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=12.284;DP=598;FS=12.390;HRun=2;HaplotypeScore=91.0858;InbreedingCoeff=0.9781;MQ=54.99;MQ0=8;MQRankSum=-0.693;QD=41.93;ReadPosRankSum=6.185;VQSLOD=3.5377;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,13:13:30.10:471,30,0	1/1:0,7:7:18.06:293,18,0	0/0:21,0:3:9.03:0,9,173	0/0:15,0:3:9.03:0,9,150	0/0:23,0:23:66.23:0,66,1341	1/1:0,26:26:72.25:1172,72,0	1/1:0,18:18:36.12:586,36,0	0/0:105,0:80:99:0,241,4666	0/0:13,0:13:39.13:0,39,767	1/1:0,25:24:69.24:1123,69,0	1/1:0,24:22:51.17:828,51,0	1/1:0,16:15:36.12:586,36,0	0/0:15,0:15:45.15:0,45,912	1/1:0,15:15:42.14:684,42,0	1/1:0,23:23:60.20:977,60,0	1/1:0,16:16:42.14:683,42,0	1/1:0,16:16:39.13:634,39,0	1/1:0,18:18:42.14:657,42,0	1/1:1,15:16:45.15:719,45,0	1/1:0,24:24:66.23:1075,66,0	1/1:0,9:9:24.08:379,24,0	1/1:0,22:22:57.19:929,57,0	0/0:24,0:24:66.23:0,66,1331	0/0:11,0:11:33.11:0,33,656	1/1:0,17:17:42.14:683,42,0	1/1:0,27:27:81.28:1318,81,0	1/1:0,31:31:84.29:1367,84,0	1/1:0,8:8:24.08:391,24,0
chr10	65093979	.	AAAGAAAGAAAGAAAGG	A	12130.27	PASS	AB=0.761;AC=40;AF=0.741;AN=54;BaseQRankSum=1.084;DP=610;FS=2.703;HRun=0;HaplotypeScore=194.3935;InbreedingCoeff=0.6343;MQ=52.48;MQ0=8;MQRankSum=0.618;QD=29.44;ReadPosRankSum=1.834;VQSLOD=4.1863;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:4,18:21:1.84:130,2,0	1/1:10,0:10:13.09:98,13,0	./.	0/0:9,0:3:0:0,0,0	0/0:29,0:27:68.66:0,69,1576	1/1:1,23:24:12.04:543,12,0	1/1:22,0:21:60.07:1033,60,0	0/0:82,0:53:99:0,133,2014	0/1:15,0:15:76.69:77,0,356	1/1:20,2:20:59.99:1322,60,0	1/1:0,22:22:50.72:1070,51,0	1/1:1,22:23:6.02:280,6,0	0/0:21,0:21:24.07:0,24,669	1/1:3,15:18:21.07:954,21,0	1/1:1,23:24:20.75:967,21,0	1/1:1,21:22:3.01:139,3,0	0/1:2,21:23:4.04:183,0,4	1/1:19,2:20:2.03:1036,2,0	1/1:6,16:19:45.06:716,45,0	1/1:0,24:23:50.49:558,50,0	1/1:18,0:17:32.91:414,33,0	1/1:1,12:13:20.71:148,21,0	0/0:20,0:20:37.46:0,37,698	0/0:27,0:27:26.95:0,27,497	1/1:0,13:13:6.02:280,6,0	1/1:0,16:16:48.10:1319,48,0	1/1:2,29:30:11.29:693,11,0	1/1:7,0:6:8.96:171,9,0
chr10	65093983	.	AAAGAAAGAAAGG	A	8011.28	PASS	AB=1.000;AC=41;AF=0.759;AN=54;BaseQRankSum=5.404;DP=588;FS=3.684;HRun=0;HaplotypeScore=175.8702;InbreedingCoeff=0.7204;MQ=52.72;MQ0=7;MQRankSum=1.455;QD=20.08;ReadPosRankSum=2.115;VQSLOD=4.1175;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:21:4.61:106,5,0	1/1:0,10:10:17.83:270,18,0	./.	0/0:5,0:1:0:0,0,0	0/0:31,0:29:51.62:0,52,898	1/1:23,0:23:12.04:352,12,0	1/1:22,0:21:46.11:579,46,0	0/0:81,0:52:99:0,115,1227	0/1:14,0:14:78.74:79,0,190	1/1:23,0:21:59.14:849,59,0	1/1:22,0:22:47.61:681,48,0	1/1:22,0:22:6.02:184,6,0	0/0:21,0:21:24.04:0,24,427	1/1:15,0:15:21.07:619,21,0	1/1:23,0:23:20.75:632,21,0	1/1:21,0:21:3.01:91,3,0	1/1:22,0:22:6.02:127,6,0	1/1:19,0:18:12.24:631,12,0	1/1:22,0:19:42.03:441,42,0	1/1:24,0:23:44.31:376,44,0	1/1:18,0:17:31.15:272,31,0	1/1:12,0:12:20.67:132,21,0	0/0:20,0:20:31.75:0,32,456	0/0:26,0:26:20.94:0,21,299	1/1:13,0:13:6.02:184,6,0	1/1:16,0:16:44.13:814,44,0	1/1:31,0:30:17.01:472,17,0	1/1:5,0:4:8.96:122,9,0
chr10	65094021	.	A	AG	596.32	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.448;DP=617;FS=13.918;HRun=1;HaplotypeScore=122.0708;InbreedingCoeff=0.8522;MQ=60.76;MQ0=7;MQRankSum=-4.926;QD=10.11;ReadPosRankSum=-3.774;VQSLOD=-0.3419;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:19:24.55:0,25,308	0/0:11,0:11:27.01:0,27,318	0/0:19,0:13:31.28:0,31,365	0/0:19,0:13:23.41:0,23,343	0/0:27,0:25:66.61:0,67,822	0/0:26,0:26:24.04:0,24,271	0/0:16,0:15:44.35:0,44,527	1/1:23,33:42:54.41:691,54,0	0/0:17,0:17:48.06:0,48,542	0/0:24,0:23:66.19:0,66,776	0/0:26,0:26:58.41:0,58,699	0/0:18,0:18:6.01:0,6,60	0/0:20,0:20:39.13:0,39,503	0/0:18,0:18:30.46:0,30,317	0/0:26,0:26:35.60:0,36,388	0/0:21,0:21:18:0,18,203	0/0:20,0:20:21.04:0,21,255	0/0:17,0:16:44.07:0,44,525	0/0:26,0:25:69.16:0,69,819	0/0:27,0:26:63.19:0,63,785	0/0:27,0:25:65.41:0,65,777	0/0:13,0:13:31.34:0,31,387	0/0:27,0:27:69.19:0,69,864	0/0:22,0:22:39.13:0,39,504	0/0:11,0:11:12.03:0,12,138	0/0:16,0:16:42.11:0,42,483	0/0:37,0:36:54.01:0,54,638	0/0:6,0:5:15.05:0,15,185
chr10	65095069	.	TAAGG	T	1394.81	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=9.016;DP=778;FS=4.126;HRun=0;HaplotypeScore=123.7917;InbreedingCoeff=0.9703;MQ=65.54;MQ0=2;MQRankSum=-5.457;QD=22.50;ReadPosRankSum=-5.701;VQSLOD=2.2091;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,141,3455	0/0:19,0:19:57.20:0,57,1457	0/0:16,0:16:42.14:0,42,1020	0/0:22,0:22:60.14:0,60,1372	0/0:17,0:17:48:0,48,1210	0/0:17,0:17:42.13:0,42,1037	0/0:23,0:23:61.42:0,61,1454	1/1:15,47:49:99:1490,105,0	0/0:30,0:30:84.29:0,84,2178	0/0:20,0:20:57.20:0,57,1460	0/0:18,0:18:51.18:0,51,1291	0/0:34,0:34:93.32:0,93,2416	0/0:32,0:32:87.30:0,87,2201	0/0:41,0:41:99:0,120,2923	0/0:44,0:44:99:0,123,3071	0/0:33,0:33:90.31:0,90,2296	0/0:41,0:41:99:0,111,2787	0/0:32,0:32:84.29:0,84,2151	0/0:18,0:18:51.18:0,51,1325	0/0:23,0:23:66.21:0,66,1649	0/0:41,0:41:99:0,114,2757	0/0:22,0:22:57.20:0,57,1477	0/0:20,0:20:51.14:0,51,1233	0/0:28,0:28:75.22:0,75,1760	0/0:19,0:19:51.09:0,51,1074	0/0:24,0:24:57.19:0,57,1391	0/0:29,0:29:81.28:0,81,2044	0/0:4,0:4:12.04:0,12,312
chr10	65095521	.	G	GCCC	5664.68	PASS	AB=0.643;AC=41;AF=0.732;AN=56;BaseQRankSum=5.485;DP=549;FS=6.153;HRun=9;HaplotypeScore=99.9742;InbreedingCoeff=0.8332;MQ=67.38;MQ0=3;MQRankSum=-1.649;QD=13.02;ReadPosRankSum=-0.298;VQSLOD=1.8858;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:14,1:38:35.41:340,35,0	0/0:5,0:7:1.54:0,2,19	0/0:14,0:15:29.57:0,30,329	0/0:15,0:14:23.07:0,23,305	0/0:23,0:24:60.08:0,60,738	1/1:4,2:26:52.06:463,52,0	1/1:5,0:22:37.13:301,37,0	1/1:40,2:61:67.74:573,68,0	1/1:3,16:21:36.12:710,36,0	1/1:8,1:19:25.12:184,25,0	1/1:2,0:10:10.21:72,10,0	1/1:2,0:12:20.92:161,21,0	0/0:13,0:13:36.11:0,36,455	1/1:4,0:14:22.59:160,23,0	1/1:4,0:14:23.91:184,24,0	1/1:0,1:14:37.13:333,37,0	1/1:4,0:26:44.33:327,44,0	1/1:3,0:21:31.52:217,32,0	0/1:4,0:9:14.36:130,0,14	1/1:3,1:14:31.17:285,31,0	1/1:9,0:28:35.86:276,36,0	1/1:3,0:18:29.39:212,29,0	0/0:17,0:18:45.02:0,45,535	0/0:21,0:21:54.14:0,54,682	1/1:6,1:20:26.91:209,27,0	1/1:6,0:15:23.91:183,24,0	1/1:2,0:19:43.03:324,43,0	1/1:1,0:6:2.99:23,3,0
chr10	65095561	.	C	CT	1188.60	PASS	AB=0.695;AC=1;AF=0.018;AN=56;BaseQRankSum=5.717;DP=587;FS=5.304;HRun=1;HaplotypeScore=82.4161;InbreedingCoeff=-0.0201;MQ=61.25;MQ0=0;MQRankSum=-0.130;QD=14.50;ReadPosRankSum=-2.418;VQSLOD=2.2743;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,99,1250	0/0:4,0:4:12.04:0,12,156	0/0:13,0:8:20.82:0,21,209	0/0:13,0:11:29.09:0,29,320	0/0:24,0:24:66.21:0,66,855	0/0:28,0:26:72.92:0,73,888	0/0:20,0:19:51.14:0,51,645	0/1:46,36:81:99:1263,0,1437	0/0:29,0:29:59.41:0,59,747	0/0:15,0:15:42.14:0,42,545	0/0:7,0:7:18.04:0,18,218	0/0:15,0:15:42.12:0,42,531	0/0:11,0:11:33.09:0,33,412	0/0:9,0:9:18.05:0,18,219	0/0:15,0:15:45.15:0,45,582	0/0:19,0:19:45.15:0,45,584	0/0:20,0:20:57.18:0,57,736	0/0:26,0:26:69.18:0,69,864	0/0:21,0:21:60.19:0,60,776	0/0:12,0:12:30.10:0,30,390	0/0:26,0:26:66.21:0,66,855	0/0:19,0:19:57.19:0,57,740	0/0:21,0:21:57.19:0,57,739	0/0:23,0:23:63.20:0,63,818	0/0:18,0:18:48.16:0,48,623	0/0:20,0:20:57.19:0,57,739	0/0:27,0:27:78.25:0,78,1011	0/0:11,0:11:33.11:0,33,428
chr10	65096515	.	G	GAGA	539.76	PASS	AC=2;AF=0.037;AN=54;BaseQRankSum=4.882;DP=508;FS=6.462;HRun=0;HaplotypeScore=56.3807;InbreedingCoeff=0.7531;MQ=52.17;MQ0=33;MQRankSum=-5.428;QD=21.59;ReadPosRankSum=-3.492;VQSLOD=1.3441;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:28:60.19:0,60,996	0/0:8,0:8:24.07:0,24,384	0/0:27,0:1:2.98:0,3,21	./.	0/0:15,0:14:36.11:0,36,586	0/0:22,0:22:66.18:0,66,1056	0/0:24,0:23:48.16:0,48,818	1/1:14,10:17:33.07:634,33,0	0/0:26,0:26:57.17:0,57,921	0/0:8,0:8:18.06:0,18,277	0/0:6,0:6:18.06:0,18,307	0/0:12,0:12:36.12:0,36,606	0/0:18,0:18:51.04:0,51,820	0/0:23,0:23:57.19:0,57,958	0/0:24,0:24:51.17:0,51,856	0/0:26,0:26:63.18:0,63,1035	0/0:36,0:34:45.15:0,45,741	0/0:20,0:20:21.07:0,21,358	0/0:6,0:5:9.03:0,9,153	0/0:11,0:11:30.10:0,30,511	0/0:20,0:18:21.07:0,21,358	0/0:10,0:10:18.06:0,18,307	0/0:8,0:8:18.06:0,18,294	0/0:18,0:18:15.05:0,15,256	0/0:13,0:13:39.13:0,39,664	0/0:13,0:13:36.12:0,36,614	0/0:28,0:28:72.25:0,72,1227	0/0:6,0:5:12.04:0,12,163
chr10	65097122	.	C	CT	979.98	PASS	AB=0.741;AC=1;AF=0.018;AN=56;BaseQRankSum=4.912;DP=740;FS=7.197;HRun=7;HaplotypeScore=71.6749;InbreedingCoeff=-0.0184;MQ=64.01;MQ0=0;MQRankSum=-2.575;QD=8.17;ReadPosRankSum=-5.179;VQSLOD=-0.2708;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:72.09:0,72,687	0/0:14,0:14:39.06:0,39,376	0/0:24,0:18:50.41:0,50,437	0/0:12,0:11:20.79:0,21,167	0/0:26,0:26:63.09:0,63,608	0/0:20,0:20:51.08:0,51,492	0/0:13,0:13:30.05:0,30,290	0/1:78,42:116:99:1054,0,1450	0/0:21,0:21:51.06:0,51,486	0/0:33,0:33:93.12:0,93,889	0/0:26,0:26:72.10:0,72,690	0/0:25,1:26:75.12:0,75,724	0/0:16,0:16:48.08:0,48,463	0/0:21,0:21:63.10:0,63,608	0/0:22,0:22:60.08:0,60,574	0/0:15,0:15:36.04:0,36,341	0/0:23,0:23:63.08:0,63,603	0/0:39,0:39:99:0,108,1043	0/0:25,0:23:63.09:0,63,602	0/0:29,0:29:69.08:0,69,655	0/0:26,0:26:69.11:0,69,666	0/0:22,0:22:66.09:0,66,633	0/0:28,0:28:78.09:0,78,740	0/0:14,0:14:42.06:0,42,401	0/0:14,0:14:39.06:0,39,377	0/0:29,0:29:81.12:0,81,778	0/0:41,0:41:99:0,114,1100	0/0:14,0:14:39.06:0,39,376
chr10	65097349	.	GGGATGTTA	G	692.13	PASS	AB=0.746;AC=1;AF=0.018;AN=56;BaseQRankSum=5.560;DP=778;FS=2.351;HRun=0;HaplotypeScore=182.9366;InbreedingCoeff=-0.0184;MQ=59.19;MQ0=5;MQRankSum=-4.894;QD=7.87;ReadPosRankSum=-2.647;VQSLOD=2.3657;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,105,4521	0/0:16,0:16:48.16:0,48,2122	0/0:31,0:25:72.25:0,72,3012	0/0:27,0:24:69.24:0,69,3119	0/0:31,0:31:93.31:0,93,4102	0/0:22,0:22:66.23:0,66,3008	0/0:23,0:23:66.22:0,66,2943	0/1:58,30:68:99:767,0,6696	0/0:24,0:24:60.21:0,60,2764	0/0:25,0:25:75.26:0,75,3448	0/0:25,0:25:66.23:0,66,2863	0/0:29,0:29:87.30:0,87,3930	0/0:21,0:21:60.21:0,60,2725	0/0:32,0:32:96.33:0,96,4172	0/0:30,0:30:90.30:0,90,4028	0/0:24,0:24:72.24:0,72,2988	0/0:18,0:18:54.19:0,54,2472	0/0:15,0:15:24.41:0,24,1800	0/0:29,0:26:78.26:0,78,3304	0/0:32,0:32:96.33:0,96,4373	0/0:42,0:42:99:0,126,5471	0/0:23,0:23:69.24:0,69,3036	0/0:23,0:23:66.23:0,66,3019	0/0:20,0:20:60.21:0,60,2641	0/0:16,0:16:48.16:0,48,2219	0/0:35,0:35:99:0,105,4499	0/0:35,0:35:99:0,105,4612	0/0:7,0:7:21.07:0,21,950
chr10	65097502	.	C	CTGATGT	843.71	PASS	AB=0.568;AC=3;AF=0.054;AN=56;BaseQRankSum=9.840;DP=791;FS=13.065;HRun=0;HaplotypeScore=168.9646;InbreedingCoeff=0.7900;MQ=62.54;MQ0=3;MQRankSum=-8.981;QD=9.48;ReadPosRankSum=-4.306;VQSLOD=0.0905;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,138,3106	0/0:15,0:15:33.07:0,33,729	0/0:33,0:31:87.23:0,87,1875	0/0:28,0:23:26.73:0,27,1188	0/0:28,0:28:72.25:0,72,1692	0/0:17,0:17:48.16:0,48,1107	0/0:23,0:23:69.24:0,69,1626	1/1:64,0:51:55.95:618,56,0	0/1:6,7:23:2.77:332,0,3	0/0:34,0:34:87.30:0,87,2033	0/0:12,0:12:30.10:0,30,709	0/0:31,0:31:87.24:0,87,1951	0/0:22,0:22:63.20:0,63,1393	0/0:40,0:40:99:0,111,2524	0/0:31,0:31:87.30:0,87,2055	0/0:27,0:27:75.13:0,75,1503	0/0:20,0:20:60.18:0,60,1357	0/0:22,0:22:63.17:0,63,1383	0/0:26,0:26:75.18:0,75,1614	0/0:27,0:27:75.26:0,75,1773	0/0:42,0:42:99:0,120,2687	0/0:25,0:25:69.22:0,69,1557	0/0:20,0:20:60.21:0,60,1412	0/0:20,0:20:54.19:0,54,1275	0/0:24,0:24:66.20:0,66,1440	0/0:39,0:39:99:0,111,2520	0/0:37,0:36:99:0,108,2399	0/0:10,0:10:24.08:0,24,564
chr10	65098912	.	C	CT	3794.18	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=9.370;DP=691;FS=6.637;HRun=4;HaplotypeScore=75.9867;InbreedingCoeff=0.7087;MQ=66.48;MQ0=0;MQRankSum=-7.349;QD=27.30;ReadPosRankSum=-7.654;VQSLOD=0.0786;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:63.16:0,63,705	0/0:16,0:16:42.10:0,42,465	0/0:17,0:16:36.10:0,36,405	0/0:10,0:10:21.06:0,21,235	0/0:27,0:27:66.19:0,66,749	0/0:21,0:21:54.15:0,54,613	0/1:19,0:18:4.94:5,0,480	1/1:9,111:105:99:3789,283,0	0/0:23,0:23:66.19:0,66,748	0/0:20,0:20:60.14:0,60,661	0/0:28,0:28:81.21:0,81,906	0/0:16,0:16:48.14:0,48,544	0/0:18,0:18:51.13:0,51,569	0/0:20,0:20:57.16:0,57,646	0/0:15,0:15:39.11:0,39,442	0/0:27,0:27:78.22:0,78,885	0/0:32,0:32:90.24:0,90,1010	0/0:22,0:22:57.08:0,57,632	0/0:18,0:18:54.13:0,54,596	0/0:30,0:30:84.24:0,84,953	0/0:14,0:14:42.12:0,42,476	0/0:31,0:31:84.24:0,84,953	0/0:22,0:22:66.16:0,66,736	0/0:15,0:15:39.11:0,39,442	0/0:30,0:30:90.24:0,90,1011	0/0:23,0:23:63.16:0,63,697	0/0:20,0:20:57.13:0,57,627	0/0:14,0:14:42.12:0,42,476
chr10	65098914	.	T	TC	1014.79	PASS	AB=0.864;AC=3;AF=0.054;AN=56;BaseQRankSum=14.409;DP=698;FS=6.747;HRun=0;HaplotypeScore=82.6513;InbreedingCoeff=0.6458;MQ=63.70;MQ0=0;MQRankSum=-7.668;QD=7.25;ReadPosRankSum=-6.078;VQSLOD=1.3838;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:66.21:0,66,905	0/0:16,0:16:48.11:0,48,632	0/0:15,0:14:42.07:0,42,529	0/0:7,0:7:21.07:0,21,293	0/0:26,0:26:78.18:0,78,1018	0/0:21,0:21:63.18:0,63,833	0/1:16,3:18:40.76:41,0,616	1/1:121,0:106:36.18:1080,36,0	0/0:23,0:23:69.22:0,69,950	0/0:20,0:20:60.20:0,60,838	0/0:28,0:28:84.27:0,84,1158	0/0:19,0:19:51.15:0,51,695	0/0:19,0:19:54.17:0,54,740	0/0:20,0:20:60.19:0,60,824	0/0:15,0:15:45.13:0,45,599	0/0:27,0:27:81.26:0,81,1118	0/0:33,0:33:96.26:0,96,1301	0/0:22,0:22:60.19:0,60,817	0/0:20,0:20:57.18:0,57,781	0/0:31,0:31:93.28:0,93,1253	0/0:16,0:16:42.14:0,42,587	0/0:32,0:32:93.28:0,93,1255	0/0:22,0:22:66.22:0,66,922	0/0:16,0:16:42.09:0,42,564	0/0:30,0:30:90.30:0,90,1258	0/0:21,2:23:63.21:0,63,875	0/0:20,0:20:60.19:0,60,823	0/0:14,0:14:42.14:0,42,587
chr10	65100086	.	CT	C	8665.07	PASS	AB=0.890;AC=44;AF=0.786;AN=56;BaseQRankSum=2.225;DP=701;FS=22.137;HRun=11;HaplotypeScore=89.1179;InbreedingCoeff=0.7609;MQ=67.38;MQ0=0;MQRankSum=3.148;QD=17.30;ReadPosRankSum=5.931;VQSLOD=4.0624;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,40:44:88.91:720,89,0	1/1:0,9:10:29.01:228,29,0	0/1:15,2:17:38.28:38,0,200	0/0:13,1:14:5.25:0,5,236	0/0:20,0:20:54.11:0,54,562	1/1:2,15:18:43.94:347,44,0	1/1:4,17:22:49.97:400,50,0	0/0:76,1:111:99:0,227,1930	1/1:0,11:11:29.97:246,30,0	1/1:5,22:27:33.89:485,34,0	1/1:3,18:21:44.91:369,45,0	1/1:4,25:29:40.61:406,41,0	0/1:20,3:23:19.83:20,0,414	1/1:1,14:15:35.96:296,36,0	1/1:2,18:20:44.91:366,45,0	1/1:2,20:22:47.94:394,48,0	1/1:3,24:28:70.94:572,71,0	1/1:1,20:21:59.89:487,60,0	1/1:3,20:23:61.74:483,62,0	1/1:2,18:20:50.84:410,51,0	1/1:6,25:31:65.90:542,66,0	1/1:5,21:26:47.90:394,48,0	0/0:25,0:25:63.14:0,63,664	0/0:26,1:27:42.41:0,42,649	1/1:4,16:21:40.99:326,41,0	1/1:1,24:25:68.90:563,69,0	1/1:0,16:17:43.99:351,44,0	1/1:0,10:10:26.97:222,27,0
chr10	65100267	.	TTC	T	1774.22	PASS	AB=0.688;AC=1;AF=0.018;AN=56;BaseQRankSum=8.340;DP=696;FS=2.564;HRun=0;HaplotypeScore=88.5351;InbreedingCoeff=-0.0183;MQ=65.00;MQ0=1;MQRankSum=-2.558;QD=16.43;ReadPosRankSum=-4.069;VQSLOD=2.5662;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:87.28:0,87,1563	0/0:7,0:7:21.07:0,21,392	0/0:25,0:22:46.47:0,46,748	0/0:31,0:27:68.97:0,69,1164	0/0:31,0:31:81.09:0,81,1425	0/0:20,0:20:60.21:0,60,1105	0/0:17,0:16:48.16:0,48,895	0/1:59,49:107:99:1849,0,2557	0/0:25,0:25:75.24:0,75,1351	0/0:24,0:24:69.24:0,69,1287	0/0:25,0:25:69.24:0,69,1270	0/0:25,0:25:75.26:0,75,1398	0/0:17,0:17:51.15:0,51,898	0/0:15,0:15:45.15:0,45,828	0/0:20,0:20:60.21:0,60,1119	0/0:19,0:19:54.19:0,54,1006	0/0:19,0:19:54.18:0,54,967	0/0:22,0:22:63.22:0,63,1174	0/0:16,0:16:48.14:0,48,807	0/0:35,0:35:99:0,102,1838	0/0:24,0:24:72.25:0,72,1288	0/0:21,0:21:60.19:0,60,1067	0/0:18,0:18:48.16:0,48,894	0/0:23,0:23:66.23:0,66,1230	0/0:18,0:18:48.16:0,48,895	0/0:23,0:23:69.23:0,69,1246	0/0:23,0:23:66.23:0,66,1217	0/0:15,0:15:45.10:0,45,742
chr10	65100422	.	G	GT	1218.46	PASS	AB=0.730;AC=1;AF=0.018;AN=56;BaseQRankSum=7.399;DP=664;FS=3.726;HRun=6;HaplotypeScore=67.0767;InbreedingCoeff=-0.0260;MQ=56.83;MQ0=6;MQRankSum=-8.177;QD=11.83;ReadPosRankSum=-4.199;VQSLOD=1.4265;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,105,1062	0/0:12,0:12:24.05:0,24,244	0/0:21,0:8:21.03:0,21,205	0/0:27,0:14:2.27:0,2,239	0/0:23,0:23:60.11:0,60,604	0/0:20,0:20:51.10:0,51,513	0/0:32,0:26:69.15:0,69,704	0/1:65,38:100:99:1293,0,942	0/0:21,0:21:57.13:0,57,581	0/0:16,0:16:36.08:0,36,367	0/0:23,0:23:69.15:0,69,702	0/0:18,0:18:47.72:0,48,481	0/0:10,0:10:24.05:0,24,245	0/0:6,0:6:15.03:0,15,153	0/0:20,0:20:57.13:0,57,581	0/0:12,0:12:30.07:0,30,306	0/0:33,0:33:99:0,99,1001	0/0:21,0:21:60.14:0,60,612	0/0:21,0:19:54.12:0,54,550	0/0:22,0:22:63.10:0,63,632	0/0:20,0:20:48.09:0,48,483	0/0:11,0:11:33.07:0,33,336	0/0:19,0:18:48.09:0,48,483	0/0:22,0:22:57.13:0,57,581	0/0:26,0:26:69.15:0,69,704	0/0:22,0:22:57.12:0,57,580	0/0:24,0:24:63.14:0,63,642	0/0:19,0:19:57.13:0,57,582
chr10	65100886	.	AG	A	200.77	PASS	AB=0.758;AC=1;AF=0.018;AN=56;BaseQRankSum=5.332;DP=546;FS=1.203;HRun=1;HaplotypeScore=55.5790;InbreedingCoeff=-0.0188;MQ=66.30;MQ0=6;MQRankSum=-1.322;QD=4.27;ReadPosRankSum=-2.058;VQSLOD=-0.4540;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:38:99:0,108,1688	0/0:5,0:5:15.05:0,15,235	0/0:15,0:15:45.13:0,45,677	0/0:20,0:20:36.86:0,37,814	0/0:16,0:16:45.14:0,45,696	0/0:13,0:13:36.12:0,36,576	0/0:22,0:22:66.22:0,66,1051	0/1:32,15:27:99:275,0,638	0/0:17,0:17:51.17:0,51,812	0/0:25,0:25:72.24:0,72,1131	0/0:9,0:9:24.08:0,24,380	0/0:24,0:24:66.21:0,66,1031	0/0:13,0:13:39.12:0,39,598	0/0:13,0:13:36.12:0,36,575	0/0:20,0:20:60.19:0,60,932	0/0:16,0:16:42.14:0,42,672	0/0:35,0:35:99:0,105,1679	0/0:15,0:15:45.12:0,45,692	0/0:17,0:17:51.17:0,51,816	0/0:16,0:16:48.14:0,48,741	0/0:23,0:23:66.21:0,66,1031	0/0:14,0:14:39.13:0,39,624	0/0:17,0:16:51.15:0,51,790	0/0:28,0:28:84.29:0,84,1341	0/0:18,0:18:54.18:0,54,863	0/0:19,0:19:57.19:0,57,891	0/0:19,0:19:57.19:0,57,911	0/0:11,0:11:33.11:0,33,527
chr10	65101787	.	GAGA	G	472.60	PASS	AB=0.636;AC=1;AF=0.019;AN=52;BaseQRankSum=5.976;DP=801;FS=23.649;HRun=0;HaplotypeScore=92.6141;InbreedingCoeff=-0.0196;MQ=46.72;MQ0=67;MQRankSum=-5.157;QD=3.61;ReadPosRankSum=-1.944;VQSLOD=0.2760;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:75.03:0,75,1616	0/0:13,0:13:39.11:0,39,851	./.	./.	0/0:21,0:21:42.13:0,42,873	0/0:35,0:35:87.27:0,87,1956	0/0:29,0:26:44.95:0,45,941	0/1:56,75:47:99:547,0,379	0/0:18,0:14:36.12:0,36,800	0/0:26,0:26:78.23:0,78,1671	0/0:24,0:23:51.09:0,51,1074	0/0:21,0:20:39.13:0,39,897	0/0:14,0:14:30.10:0,30,691	0/0:27,0:27:45.14:0,45,991	0/0:20,0:20:45.15:0,45,1017	0/0:28,0:28:60.21:0,60,1382	0/0:29,0:26:60.21:0,60,1383	0/0:34,0:32:57.18:0,57,1269	0/0:29,0:17:48.14:0,48,1061	0/0:32,0:32:96.28:0,96,2088	0/0:32,0:30:66.21:0,66,1456	0/0:21,0:20:54.19:0,54,1236	0/0:21,0:18:42.03:0,42,837	0/0:21,0:21:42.14:0,42,968	0/0:30,0:30:75.01:0,75,1630	0/0:26,0:26:75.19:0,75,1596	0/0:37,0:35:87.27:0,87,1878	0/0:19,0:19:51.18:0,51,1176
chr10	65102248	.	T	TG	2638.29	PASS	AB=0.562;AC=1;AF=0.018;AN=56;BaseQRankSum=-4.331;DP=719;FS=9.230;HRun=0;HaplotypeScore=83.1472;InbreedingCoeff=-0.0203;MQ=64.62;MQ0=2;MQRankSum=3.538;QD=17.71;ReadPosRankSum=-2.890;VQSLOD=4.8771;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:96.13:0,96,1140	0/0:8,0:8:24.03:0,24,296	0/0:16,0:9:10.96:0,11,123	0/0:11,0:9:14.65:0,15,105	0/0:26,0:26:67.01:0,67,737	0/0:14,0:14:38.73:0,39,525	0/0:16,0:16:48.09:0,48,600	0/1:33,79:145:99:2713,0,191	0/0:26,0:26:78.13:0,78,922	0/0:28,0:27:72:0,72,804	0/0:29,0:29:75.04:0,75,878	0/0:11,0:11:30.01:0,30,308	0/0:23,0:23:66.04:0,66,732	0/0:24,0:24:63.05:0,63,697	0/0:26,0:26:74.64:0,75,825	0/0:13,0:13:36.08:0,36,439	0/0:14,0:14:42.08:0,42,501	0/0:17,0:17:48.06:0,48,590	0/0:19,0:19:54.02:0,54,614	0/0:25,0:25:72.03:0,72,848	0/0:22,0:22:56.78:0,57,760	0/0:21,0:21:59.57:0,60,680	0/0:26,0:26:55.85:0,56,788	0/0:15,0:15:45.08:0,45,557	0/0:20,0:20:54.03:0,54,576	0/0:32,0:31:88.66:0,89,992	0/0:32,0:32:89.75:0,90,1066	0/0:24,0:24:66.60:0,67,825
chr10	65102527	.	A	AG	24188.98	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-12.922;DP=804;FS=0.000;HRun=0;HaplotypeScore=72.8299;InbreedingCoeff=0.9965;MQ=69.85;MQ0=16;MQRankSum=-1.963;QD=38.76;ReadPosRankSum=1.147;VQSLOD=5.0560;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,31:36:90.31:1438,90,0	1/1:0,5:5:15.05:240,15,0	0/0:31,0:15:35.41:0,35,533	0/0:37,0:24:54.89:0,55,760	0/0:32,0:32:96.32:0,96,1336	1/1:1,21:22:54.18:862,54,0	1/1:1,21:22:60.20:959,60,0	1/1:2,46:28:48.16:746,48,0	1/1:1,23:24:66.23:1055,66,0	1/1:1,25:26:66.22:1055,66,0	1/1:1,18:19:45.15:717,45,0	1/1:1,39:40:99:1727,108,0	0/0:28,0:28:81.27:0,81,1125	1/1:1,34:35:99:1580,99,0	1/1:0,28:28:81.28:1295,81,0	1/1:1,22:23:54.18:863,54,0	1/1:0,19:19:51.17:815,51,0	1/1:0,24:24:69.24:1103,69,0	1/1:0,23:22:63.21:974,63,0	1/1:2,15:18:39.12:600,39,0	1/1:1,61:62:99:2302,144,0	1/1:2,30:32:69.24:1103,69,0	0/0:19,0:19:42.14:0,42,587	0/0:33,0:33:99:0,99,1347	1/1:2,14:16:27.09:432,27,0	1/1:3,39:41:99:1648,105,0	1/1:0,44:44:99:2052,129,0	1/1:0,15:15:39.13:623,39,0
chr10	65102730	.	CT	C	700.99	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.002;DP=583;FS=9.959;HRun=2;HaplotypeScore=56.4784;InbreedingCoeff=0.8971;MQ=62.79;MQ0=1;MQRankSum=1.464;QD=33.38;ReadPosRankSum=0.224;VQSLOD=2.9744;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:78.24:0,78,1216	0/0:6,0:6:18.03:0,18,241	0/0:19,0:15:42.10:0,42,623	0/0:13,0:13:36.07:0,36,526	0/0:21,0:21:63.17:0,63,924	0/0:25,0:25:75.19:0,75,1121	0/0:9,0:9:27.08:0,27,408	0/0:34,0:9:5.99:0,6,66	1/1:0,21:21:57.19:796,57,0	0/0:22,0:22:66.22:0,66,1007	0/0:24,0:24:72.23:0,72,1114	0/0:22,0:22:66.21:0,66,1030	0/0:25,0:25:75.22:0,75,1148	0/0:22,0:22:66.21:0,66,1029	0/0:17,0:17:51.16:0,51,792	0/0:14,0:14:42.14:0,42,670	0/0:18,0:18:54.15:0,54,808	0/0:14,0:14:38.45:0,38,551	0/0:26,0:26:78.24:0,78,1198	0/0:26,0:26:78.22:0,78,1171	0/0:22,0:22:63.15:0,63,929	0/0:29,0:29:87.27:0,87,1340	0/0:30,0:30:90.28:0,90,1385	0/0:27,0:27:81.26:0,81,1269	0/0:16,0:16:48.11:0,48,676	0/0:21,0:21:60.20:0,60,953	0/0:21,0:21:63.18:0,63,951	0/0:12,0:12:36.12:0,36,573
chr10	65103005	.	A	AG	281.82	PASS	AB=0.755;AC=1;AF=0.018;AN=56;BaseQRankSum=5.729;DP=604;FS=3.826;HRun=0;HaplotypeScore=66.9881;InbreedingCoeff=-0.0185;MQ=77.95;MQ0=0;MQRankSum=-4.841;QD=3.81;ReadPosRankSum=-1.551;VQSLOD=2.4005;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:69.21:0,69,944	0/0:6,0:6:18.06:0,18,252	0/0:17,0:17:51.13:0,51,626	0/0:17,0:17:37.18:0,37,543	0/0:37,0:37:99:0,108,1494	0/0:25,0:25:66.22:0,66,920	0/0:17,0:17:51.15:0,51,686	0/1:50,24:60:99:356,0,1354	0/0:17,0:17:51.16:0,51,698	0/0:21,0:21:60.19:0,60,823	0/0:29,0:29:87.28:0,87,1192	0/0:12,0:12:36.11:0,36,488	0/0:20,0:20:60.20:0,60,838	0/0:15,0:15:39.13:0,39,545	0/0:22,0:22:66.22:0,66,923	0/0:10,0:10:30.10:0,30,419	0/0:16,0:16:45.13:0,45,611	0/0:22,0:22:63.21:0,63,881	0/0:13,0:13:36.12:0,36,502	0/0:37,0:37:99:0,111,1550	0/0:19,0:19:57.19:0,57,796	0/0:22,0:22:65.81:0,66,889	0/0:24,0:24:72.24:0,72,1002	0/0:10,0:10:30.09:0,30,404	0/0:15,0:15:45.15:0,45,628	0/0:24,0:24:69.21:0,69,935	0/0:30,0:30:90.30:0,90,1259	0/0:10,0:10:30.10:0,30,417
chr10	65103042	.	T	TA	403.15	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=1.976;DP=567;FS=7.805;HRun=9;HaplotypeScore=60.2625;InbreedingCoeff=0.7218;MQ=64.81;MQ0=0;MQRankSum=-0.348;QD=25.20;ReadPosRankSum=-0.780;VQSLOD=3.9776;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:74.97:0,75,651	0/0:3,0:3:6:0,6,52	0/0:18,0:15:16.17:0,16,181	0/0:3,0:3:9:0,9,78	0/0:35,0:35:92.95:0,93,800	0/0:18,0:18:44.94:0,45,383	0/0:11,0:11:20.98:0,21,182	0/0:47,0:30:47.17:0,47,274	1/1:1,15:16:45.12:498,45,0	0/0:20,0:21:56.02:0,56,473	0/0:23,0:23:56.98:0,57,494	0/0:15,0:15:38.94:0,39,331	0/0:21,0:21:59.97:0,60,514	0/0:16,0:16:44.99:0,45,391	0/0:32,0:32:86.94:0,87,749	0/0:13,0:13:35.97:0,36,308	0/0:22,0:22:56.98:0,57,495	0/0:22,0:22:62.95:0,63,541	0/0:14,0:14:36.84:0,37,305	0/0:35,0:35:68.22:0,68,754	0/0:16,0:16:41.99:0,42,365	0/0:14,0:14:38.99:0,39,338	0/0:26,0:26:62.93:0,63,537	0/0:12,0:12:32.99:0,33,286	0/0:14,0:14:17.31:0,17,289	0/0:26,0:26:68.95:0,69,594	0/0:35,0:34:86.97:0,87,755	0/0:10,0:10:2.57:0,3,184
chr10	65103052	.	CTG	C	207.04	PASS	AB=0.746;AC=1;AF=0.018;AN=56;BaseQRankSum=4.731;DP=589;FS=35.106;HRun=0;HaplotypeScore=75.9930;InbreedingCoeff=-0.0200;MQ=66.53;MQ0=2;MQRankSum=-3.443;QD=3.91;ReadPosRankSum=-3.356;VQSLOD=-0.3092;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:87.23:0,87,1492	0/0:4,0:4:12.04:0,12,212	0/0:21,0:17:29.97:0,30,514	0/0:6,0:6:15.05:0,15,223	0/0:34,0:34:96.29:0,96,1628	0/0:17,0:17:48.16:0,48,842	0/0:9,0:9:21.07:0,21,371	0/1:35,18:35:99:281,0,365	0/0:16,0:16:45.14:0,45,733	0/0:20,0:20:54.18:0,54,945	0/0:22,0:22:60.20:0,60,1034	0/0:15,0:15:39.12:0,39,659	0/0:21,0:21:57.20:0,57,1003	0/0:16,0:16:45.14:0,45,757	0/0:31,0:31:93.32:0,93,1627	0/0:18,0:18:51.16:0,51,871	0/0:24,0:24:72.25:0,72,1256	0/0:23,0:23:69.22:0,69,1189	0/0:20,0:20:60.21:0,60,1053	0/0:33,0:33:90.24:0,90,1501	0/0:18,0:18:54.15:0,54,883	0/0:15,0:15:42.10:0,42,657	0/0:24,0:24:69.20:0,69,1160	0/0:12,0:12:33.11:0,33,583	0/0:15,0:15:45.15:0,45,795	0/0:30,0:30:84.28:0,84,1455	0/0:33,0:32:96.26:0,96,1573	0/0:9,0:9:27.07:0,27,446
chr10	65103240	.	T	TA	203.50	PASS	AB=0.623;AC=1;AF=0.018;AN=56;BaseQRankSum=4.446;DP=715;FS=1.422;HRun=2;HaplotypeScore=63.2680;InbreedingCoeff=0.6120;MQ=63.80;MQ0=20;MQRankSum=-4.507;QD=4.73;ReadPosRankSum=-1.582;VQSLOD=0.0525;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,159,1929	0/0:7,0:7:18.06:0,18,223	0/0:14,0:12:33.10:0,33,396	0/0:8,0:8:23.93:0,24,259	0/0:35,0:35:96.30:0,96,1190	0/0:21,0:21:63.17:0,63,756	0/0:34,0:34:99:0,99,1214	0/1:17,26:18:0.66:278,0,1	0/0:31,3:31:87.27:0,87,1076	0/0:25,0:25:69.21:0,69,855	0/0:29,0:29:81.25:0,81,1004	0/0:17,0:17:45.14:0,45,558	0/0:21,0:21:63.19:0,63,769	0/0:22,0:22:66.21:0,66,817	0/0:33,0:33:96.30:0,96,1190	0/0:40,0:40:99:0,117,1451	0/0:28,0:28:78.24:0,78,967	0/0:10,0:10:30.09:0,30,372	0/0:15,0:15:45.14:0,45,558	0/0:23,0:23:69.22:0,69,855	0/0:41,0:41:99:0,120,1473	0/0:26,0:26:78.25:0,78,967	0/0:14,0:14:39.12:0,39,483	0/0:22,0:22:60.19:0,60,744	0/0:24,0:24:72.23:0,72,891	0/0:33,0:33:93.28:0,93,1141	0/0:33,0:33:96.28:0,96,1165	0/0:9,0:9:27.08:0,27,335
chr10	65103783	.	ACC	A	2310.08	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=9.775;DP=651;FS=11.836;HRun=3;HaplotypeScore=75.0691;InbreedingCoeff=0.9989;MQ=72.22;MQ0=0;MQRankSum=-7.019;QD=38.50;ReadPosRankSum=-5.766;VQSLOD=1.1652;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,147,2632	0/0:10,0:9:30.10:0,30,550	0/0:27,0:27:76.43:0,76,1305	0/0:16,0:16:48.16:0,48,879	0/0:21,0:21:60.21:0,60,1120	0/0:22,0:22:66.23:0,66,1223	0/0:16,0:16:48.14:0,48,839	1/1:2,58:57:99:2405,165,0	0/0:21,0:21:63.22:0,63,1180	0/0:26,0:26:78.27:0,78,1452	0/0:21,0:21:57.19:0,57,1036	0/0:19,0:19:57.20:0,57,1063	0/0:17,0:17:48.16:0,48,900	0/0:19,0:19:57.20:0,57,1060	0/0:28,0:28:81.24:0,81,1471	0/0:28,0:27:81.28:0,81,1507	0/0:19,0:19:57.19:0,57,1029	0/0:22,0:21:66.23:0,66,1222	0/0:25,0:25:69.24:0,69,1276	0/0:19,0:19:57.18:0,57,1007	0/0:24,0:24:72.25:0,72,1337	0/0:25,0:25:75.26:0,75,1386	0/0:13,0:13:39.13:0,39,726	0/0:16,0:16:48.12:0,48,842	0/0:18,0:18:54.19:0,54,995	0/0:22,0:22:63.22:0,63,1180	0/0:36,0:35:99:0,108,1902	0/0:10,0:10:30.10:0,30,562
chr10	65104488	.	C	CCA	230.74	PASS	AB=0.859;AC=2;AF=0.036;AN=56;BaseQRankSum=1.342;DP=713;FS=12.295;HRun=0;HaplotypeScore=121.4263;InbreedingCoeff=0.0102;MQ=56.81;MQ0=16;MQRankSum=-2.500;QD=6.07;ReadPosRankSum=-1.119;VQSLOD=2.3859;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:39.12:0,39,468	0/0:5,0:5:9.03:0,9,105	0/0:52,0:30:36.12:0,36,418	0/0:53,0:32:45.76:0,46,502	0/0:14,0:12:18.06:0,18,220	0/0:15,0:15:23.58:0,24,244	0/0:22,0:24:22.74:0,23,367	0/0:25,0:18:23.80:0,24,258	0/1:14,9:20:12.57:304,0,13	0/0:21,0:21:45.01:0,45,505	0/0:5,0:5:12.04:0,12,147	0/0:26,0:26:57.16:0,57,672	0/0:17,0:17:41.95:0,42,476	0/0:28,0:26:45.13:0,45,540	0/0:30,0:28:57.09:0,57,682	0/0:18,0:17:36.10:0,36,424	0/0:41,0:39:87.19:0,87,1013	0/0:20,0:19:24.67:0,25,421	0/0:23,0:22:30.04:0,30,383	0/0:10,0:10:15.05:0,15,183	0/0:64,0:64:89.14:0,89,1261	0/0:14,0:15:27.08:0,27,329	0/0:21,0:21:42.33:0,42,527	0/0:48,0:49:99:0,100,1385	0/1:15,0:14:8.42:8,0,266	0/0:26,0:26:48.12:0,48,542	0/0:26,0:26:51.15:0,51,608	0/0:13,0:13:27.06:0,27,314
chr10	65104511	.	G	GACAC	12055.99	PASS	AB=0.571;AC=43;AF=0.768;AN=56;BaseQRankSum=-7.301;DP=727;FS=21.382;HRun=0;HaplotypeScore=106.0796;InbreedingCoeff=0.7924;MQ=54.54;MQ0=20;MQRankSum=1.912;QD=23.36;ReadPosRankSum=3.392;VQSLOD=2.6852;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:11,21:35:23.67:529,24,0	1/1:0,4:4:6.02:148,6,0	0/0:45,0:11:14.61:0,15,133	0/0:63,0:30:12.99:0,13,429	0/0:10,0:8:15.04:0,15,225	1/1:3,8:11:9.03:222,9,0	1/1:9,18:28:14.79:308,15,0	1/1:18,0:9:8.94:70,9,0	0/1:7,0:26:29.20:120,0,29	1/1:5,14:20:40.36:793,40,0	1/1:5,0:5:6.01:71,6,0	1/1:5,16:24:41.08:775,41,0	0/0:18,0:19:48.08:0,48,720	1/1:8,23:30:27.09:667,27,0	1/1:7,23:30:47.55:1062,48,0	1/1:0,19:18:36.18:787,36,0	1/1:10,32:43:62.89:1372,63,0	1/1:6,17:23:30.10:741,30,0	1/1:4,11:13:26.90:360,27,0	1/1:2,8:10:6.02:148,6,0	1/1:25,49:80:66.26:1473,66,0	1/1:8,6:14:8.77:161,9,0	0/0:20,0:18:24.05:0,24,351	0/0:50,0:54:99:0,122,1783	1/1:7,8:15:12.04:290,12,0	1/1:6,15:21:42.30:801,42,0	1/1:4,16:20:39:904,39,0	1/1:9,1:11:17.77:254,18,0
chr10	65104767	.	CT	C	409.09	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.178;DP=649;FS=0.000;HRun=1;HaplotypeScore=64.5370;InbreedingCoeff=0.9917;MQ=66.67;MQ0=2;MQRankSum=-4.389;QD=22.73;ReadPosRankSum=-3.645;VQSLOD=2.5887;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,159,2498	0/0:8,0:8:24.08:0,24,381	0/0:29,0:20:57.05:0,57,858	0/0:30,0:23:55.08:0,55,847	0/0:18,0:18:54.18:0,54,857	0/0:25,0:25:72.25:0,72,1151	0/0:22,0:22:66.22:0,66,1051	1/1:1,17:15:19.41:500,19,0	0/0:18,0:18:51.17:0,51,812	0/0:31,0:29:87.30:0,87,1384	0/0:13,0:13:39.13:0,39,619	0/0:21,0:21:63.19:0,63,955	0/0:18,0:18:51.17:0,51,810	0/0:29,0:29:87.15:0,87,1332	0/0:30,0:30:90.31:0,90,1435	0/0:21,0:21:63.21:0,63,986	0/0:28,0:28:84.27:0,84,1317	0/0:20,0:20:60.20:0,60,957	0/0:32,0:32:96.29:0,96,1456	0/0:13,0:13:39.13:0,39,617	0/0:42,0:41:99:0,120,1876	0/0:18,0:18:54.18:0,54,863	0/0:15,0:14:36.12:0,36,568	0/0:25,0:25:75.24:0,75,1172	0/0:21,0:21:63.20:0,63,985	0/0:23,0:23:69.22:0,69,1077	0/0:13,0:12:39.10:0,39,591	0/0:15,0:15:42.14:0,42,668
chr10	65104881	.	A	AC	142.60	PASS	AB=0.643;AC=1;AF=0.018;AN=56;BaseQRankSum=3.327;DP=614;FS=6.300;HRun=1;HaplotypeScore=67.9666;InbreedingCoeff=0.0446;MQ=77.77;MQ0=1;MQRankSum=-4.065;QD=7.92;ReadPosRankSum=-2.082;VQSLOD=0.0493;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,123,1558	0/0:11,0:11:33.11:0,33,428	0/0:30,0:29:77.91:0,78,933	0/0:26,0:25:72.01:0,72,891	0/0:13,0:13:39.12:0,39,499	0/0:12,0:12:36.08:0,36,436	0/0:26,0:26:78.25:0,78,1012	0/1:8,10:12:14.55:217,0,15	0/0:29,0:29:78.16:0,78,962	0/0:20,0:20:57.19:0,57,740	0/0:8,0:8:24.08:0,24,311	0/0:17,0:17:51.17:0,51,662	0/0:18,0:18:48.16:0,48,623	0/0:30,0:30:87.28:0,87,1127	0/0:26,0:26:78.23:0,78,984	0/0:22,0:22:57.16:0,57,711	0/0:38,0:37:99:0,114,1478	0/0:22,0:22:63.18:0,63,799	0/0:8,0:8:21.05:0,21,258	0/0:14,0:14:42.12:0,42,531	0/0:58,0:58:99:0,156,1960	0/0:15,0:15:42.14:0,42,545	0/0:7,0:7:15.05:0,15,195	0/0:25,0:25:72.23:0,72,934	0/0:16,0:16:48.15:0,48,610	0/0:26,0:25:69.22:0,69,891	0/0:18,0:18:51.17:0,51,662	0/0:19,0:19:57.16:0,57,710
chr10	65104979	.	TCC	T	7680.34	PASS	AB=0.767;AC=44;AF=0.786;AN=56;BaseQRankSum=-3.274;DP=535;FS=20.835;HRun=12;HaplotypeScore=81.2092;InbreedingCoeff=0.7403;MQ=71.20;MQ0=0;MQRankSum=-1.517;QD=16.88;ReadPosRankSum=5.909;VQSLOD=1.8336;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,27:37:79.86:830,80,0	1/1:1,8:9:24.01:233,24,0	0/0:20,0:17:26.96:0,27,269	0/0:24,0:22:30.64:0,31,268	0/0:10,0:12:20:0,20,183	1/1:6,18:25:44.47:420,44,0	1/1:8,25:34:65.58:634,66,0	1/1:18,0:14:5.16:23,5,0	1/1:6,17:24:42.24:407,42,0	1/1:7,13:20:39.03:387,39,0	1/1:3,9:11:15.02:152,15,0	1/1:5,11:18:32.52:298,33,0	0/0:11,0:13:16.91:0,17,148	0/1:6,1:12:16.98:17,0,43	1/1:7,18:25:57.04:579,57,0	1/1:4,7:11:21.02:214,21,0	1/1:8,27:36:83.88:835,84,0	1/1:5,12:20:44.29:402,44,0	1/1:5,6:11:11.73:172,12,0	1/1:5,8:14:20.72:195,21,0	1/1:8,21:31:53.55:512,54,0	1/1:6,14:20:33.93:337,34,0	0/0:11,0:11:15:0,15,179	0/1:11,2:13:39.98:40,0,164	1/1:3,6:10:20.77:195,21,0	1/1:3,15:18:38.99:382,39,0	1/1:5,16:22:35.43:327,35,0	1/1:8,5:13:8.99:92,9,0
chr10	65105079	.	GA	G	910.19	PASS	AB=0.765;AC=2;AF=0.036;AN=56;BaseQRankSum=10.446;DP=680;FS=2.757;HRun=8;HaplotypeScore=69.1454;InbreedingCoeff=-0.0402;MQ=63.86;MQ0=2;MQRankSum=-1.139;QD=10.71;ReadPosRankSum=-4.619;VQSLOD=1.6465;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,150,1768	0/0:12,1:13:1.11:0,1,286	0/0:21,0:9:18.92:0,19,236	0/0:20,0:9:17.17:0,17,183	0/0:31,0:31:84.25:0,84,1004	0/0:21,0:21:60.17:0,60,713	0/0:26,0:26:75.23:0,75,906	0/1:29,39:63:21.48:982,0,21	0/0:20,0:20:57.17:0,57,678	0/0:25,0:25:63.19:0,63,752	0/1:15,2:17:12.81:13,0,425	0/0:21,0:21:60.16:0,60,704	0/0:22,0:22:60.17:0,60,711	0/0:21,0:21:54.12:0,54,607	0/0:18,0:18:51.16:0,51,616	0/0:16,0:16:48.15:0,48,580	0/0:34,0:34:90.26:0,90,1074	0/0:23,0:23:60.18:0,60,725	0/0:15,0:15:33.10:0,33,399	0/0:17,0:17:48.13:0,48,566	0/0:23,0:23:57.17:0,57,677	0/0:27,0:27:69.20:0,69,824	0/0:17,0:17:48.15:0,48,579	0/0:30,0:30:81.23:0,81,966	0/0:17,1:17:13.16:0,13,442	0/0:24,0:24:69.20:0,69,823	0/0:26,0:27:78.06:0,78,885	0/0:10,0:10:30.07:0,30,339
chr10	65105386	.	GC	G	911.65	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.760;DP=753;FS=5.106;HRun=1;HaplotypeScore=83.0438;InbreedingCoeff=0.9908;MQ=65.58;MQ0=0;MQRankSum=2.376;QD=36.47;ReadPosRankSum=1.650;VQSLOD=4.0983;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,157,2487	0/0:11,0:11:33.11:0,33,526	0/0:14,0:14:39.13:0,39,623	0/0:15,1:16:18.11:0,18,507	0/0:36,0:36:96.24:0,96,1497	0/0:26,0:26:78.27:0,78,1236	0/0:21,0:21:63.21:0,63,1007	0/0:62,0:58:99:0,168,2612	0/0:24,0:24:66.23:0,66,1052	0/0:25,0:25:75.25:0,75,1180	0/0:17,0:17:45.15:0,45,717	0/0:34,0:34:96.33:0,96,1534	1/1:0,25:25:72.24:1007,72,0	0/0:31,0:31:87.28:0,87,1367	0/0:29,0:29:84.26:0,84,1294	0/0:36,0:36:96.31:0,96,1486	0/0:30,0:30:90.31:0,90,1438	0/0:22,0:22:66.23:0,66,1055	0/0:22,0:22:63.19:0,63,982	0/0:26,0:26:78.27:0,78,1242	0/0:33,0:33:96.33:0,96,1531	0/0:34,0:34:99:0,102,1581	0/0:16,0:16:48.16:0,48,751	0/0:26,0:26:75.26:0,75,1199	0/0:29,0:29:81.28:0,81,1290	0/0:25,0:25:75.26:0,75,1198	0/0:21,0:21:63.21:0,63,1006	0/0:9,0:9:27.09:0,27,426
chr10	65105396	.	G	GC	1562.31	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=1.219;DP=767;FS=4.729;HRun=5;HaplotypeScore=83.7724;InbreedingCoeff=0.9972;MQ=67.13;MQ0=2;MQRankSum=-2.548;QD=27.90;ReadPosRankSum=-3.428;VQSLOD=2.1229;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,135,1441	0/0:11,0:11:24.06:0,24,258	0/0:19,0:17:41.31:0,41,423	0/0:20,0:20:33.63:0,34,332	0/0:36,0:36:96.21:0,96,1020	0/0:27,0:27:69.17:0,69,741	0/0:23,0:23:63.16:0,63,677	1/1:11,45:50:99:1657,126,0	0/0:26,0:26:75.19:0,75,805	0/0:28,0:28:81.18:0,81,861	0/0:18,0:18:48.12:0,48,515	0/0:32,0:32:81.18:0,81,862	0/0:23,0:23:63.16:0,63,677	0/0:29,0:29:75.17:0,75,798	0/0:26,0:26:60.13:0,60,636	0/0:36,0:36:87.20:0,87,926	0/0:30,0:30:81.15:0,81,850	0/0:27,0:27:69.14:0,69,732	0/0:21,0:21:51.13:0,51,548	0/0:29,0:29:84.19:0,84,892	0/0:30,0:30:87.18:0,87,917	0/0:34,0:34:96.20:0,96,1019	0/0:19,0:19:45.11:0,45,483	0/0:27,0:27:66.16:0,66,709	0/0:29,0:29:84.21:0,84,902	0/0:26,0:26:69.17:0,69,742	0/0:21,0:21:60.15:0,60,644	0/0:10,0:10:30.03:0,30,303
chr10	65105552	.	CA	C	2831.41	PASS	AB=0.696;AC=37;AF=0.685;AN=54;BaseQRankSum=-1.695;DP=453;FS=13.441;HRun=15;HaplotypeScore=62.0123;InbreedingCoeff=0.1827;MQ=48.74;MQ0=30;MQRankSum=0.105;QD=7.19;ReadPosRankSum=3.397;VQSLOD=1.3443;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:12,29:42:40.20:321,40,0	1/1:0,7:7:17.74:115,18,0	0/0:10,0:5:3.13:0,3,13	0/0:3,0:2:5.83:0,6,39	0/0:16,1:19:12.27:0,12,239	0/1:3,11:15:6.53:82,0,7	1/1:8,8:14:1.83:124,2,0	./.	1/1:8,6:15:16.64:98,17,0	1/1:6,10:14:27.62:166,28,0	1/1:10,9:15:25.60:159,26,0	0/1:8,14:21:5.99:86,0,6	0/1:8,0:7:4.14:4,0,89	0/1:3,11:15:9.54:66,0,10	1/1:2,14:18:27.50:165,28,0	1/1:5,9:16:23.78:130,24,0	1/1:6,15:21:45.43:280,45,0	1/1:6,15:23:5.02:170,5,0	0/1:7,3:8:0.52:54,0,1	1/1:3,11:13:28.64:178,29,0	1/1:5,9:12:20.41:134,20,0	1/1:3,10:13:6.47:141,6,0	0/1:12,1:9:37.28:37,0,61	0/0:22,1:21:29.73:0,30,260	0/1:6,9:18:34.10:116,0,34	0/1:7,11:14:14.22:173,0,14	1/1:4,12:16:2.48:133,2,0	0/1:6,5:8:9.72:61,0,10
chr10	65106205	.	TC	T	182.09	PASS	AB=1.000;AC=3;AF=0.056;AN=54;BaseQRankSum=0.759;DP=627;FS=2.824;HRun=7;HaplotypeScore=66.3186;InbreedingCoeff=0.7418;MQ=42.35;MQ0=4;MQRankSum=-1.850;QD=4.79;ReadPosRankSum=-2.037;VQSLOD=-0.5771;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:57.15:0,57,686	0/0:14,0:13:18.05:0,18,222	0/1:12,0:3:0.49:0,0,33	./.	0/0:23,0:23:21.07:0,21,264	0/0:19,0:19:18.06:0,18,226	0/0:38,0:36:42.13:0,42,528	1/1:12,14:17:27.05:275,27,0	0/0:29,0:29:63.15:0,63,764	0/0:19,0:19:51.16:0,51,640	0/0:12,0:12:21.07:0,21,264	0/0:22,0:22:39.08:0,39,473	0/0:23,0:23:54.15:0,54,677	0/0:25,0:25:45.14:0,45,553	0/0:29,0:29:66.15:0,66,789	0/0:16,0:16:21.07:0,21,264	0/0:24,0:24:54.13:0,54,661	0/0:22,0:21:48.14:0,48,591	0/0:20,0:17:45.14:0,45,555	0/0:17,0:17:24.04:0,24,285	0/0:43,0:43:63.02:0,63,779	0/0:14,0:13:15.05:0,15,188	0/0:15,0:15:15.05:0,15,189	0/0:37,0:37:66.05:0,66,818	0/0:17,0:18:33.41:0,33,392	0/0:20,0:19:45.13:0,45,554	0/0:21,0:21:39.12:0,39,486	0/0:15,0:15:33.10:0,33,412
chr10	65110994	.	TC	T	4283.59	PASS	AB=0.756;AC=38;AF=0.704;AN=54;BaseQRankSum=-1.907;DP=664;FS=0.000;HRun=2;HaplotypeScore=34.6497;InbreedingCoeff=0.6039;MQ=44.67;MQ0=19;MQRankSum=-4.136;QD=8.40;ReadPosRankSum=0.731;VQSLOD=2.0882;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,37:38:6.02:78,6,0	1/1:2,10:10:6.02:77,6,0	0/0:22,0:1:2.74:0,3,12	0/0:24,0:5:13.99:0,14,134	0/0:20,0:20:3.01:0,3,42	1/1:1,16:16:6.02:78,6,0	1/1:0,22:21:8.99:111,9,0	0/0:5,0:2:6.02:0,6,86	0/1:27,0:25:0:0,0,0	1/1:2,22:23:66.21:855,66,0	1/1:0,10:10:3.01:39,3,0	1/1:0,33:33:24.06:312,24,0	0/0:32,0:32:21.07:0,21,315	1/1:1,27:28:21.07:272,21,0	1/1:3,28:28:6.01:78,6,0	1/1:3,34:35:15.52:196,16,0	1/1:0,35:35:9.03:117,9,0	1/1:0,28:28:9.01:101,9,0	1/1:3,16:17:48.15:610,48,0	1/1:1,15:16:6.02:78,6,0	0/1:2,38:40:0:0,0,0	1/1:1,20:20:6.02:78,6,0	0/0:13,0:12:3.01:0,3,45	0/0:29,0:28:3.01:0,3,45	1/1:3,13:15:3.01:39,3,0	1/1:1,26:27:78.25:1011,78,0	1/1:0,29:27:11.99:155,12,0	./.
chr10	65115161	.	TCTGCCCACC	T	556.67	PASS	AC=2;AF=0.037;AN=54;BaseQRankSum=5.061;DP=739;FS=4.906;HRun=0;HaplotypeScore=175.9728;InbreedingCoeff=0.8486;MQ=55.90;MQ0=35;MQRankSum=-1.442;QD=34.79;ReadPosRankSum=-3.548;VQSLOD=2.3703;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,120,5548	0/0:10,0:10:30.10:0,30,1450	0/0:34,0:1:3.01:0,3,62	./.	0/0:20,0:20:51.06:0,51,2255	0/0:23,0:23:69.23:0,69,3196	0/0:29,0:29:66.23:0,66,3108	1/1:4,12:13:27.06:650,27,0	0/0:25,0:25:69.24:0,69,3237	0/0:28,0:28:81.28:0,81,3852	0/0:14,0:14:33.11:0,33,1551	0/0:28,0:28:78.27:0,78,3611	0/0:30,0:30:90.31:0,90,4288	0/0:24,0:24:72.25:0,72,3385	0/0:29,0:29:81.28:0,81,3831	0/0:22,0:22:60.21:0,60,2839	0/0:39,0:39:99:0,105,4973	0/0:25,0:25:66.23:0,66,3181	0/0:18,0:14:36.12:0,36,1574	0/0:20,0:20:54.19:0,54,2554	0/0:73,0:73:99:0,186,8418	0/0:21,0:21:51.17:0,51,2356	0/0:18,0:18:48.16:0,48,2274	0/0:44,0:44:99:0,120,5709	0/0:25,0:25:69.24:0,69,3272	0/0:25,0:24:69.24:0,69,3302	0/0:21,0:21:60.21:0,60,2860	0/0:10,0:10:30.10:0,30,1274
chr10	65116132	.	AT	A	356.11	PASS	AB=0.714;AC=1;AF=0.019;AN=52;BaseQRankSum=4.963;DP=743;FS=15.483;HRun=4;HaplotypeScore=89.2640;InbreedingCoeff=-0.0303;MQ=36.35;MQ0=132;MQRankSum=-3.238;QD=5.94;ReadPosRankSum=-0.140;VQSLOD=-0.3790;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:39:75.21:0,75,1132	0/0:17,0:12:27.09:0,27,431	./.	./.	0/0:26,0:16:21.07:0,21,313	0/0:17,0:17:36.08:0,36,531	0/0:24,0:17:36.12:0,36,507	0/1:36,24:39:99:430,0,978	0/0:32,0:28:45:0,45,702	0/0:18,0:15:42.14:0,42,669	0/0:12,0:11:18.06:0,18,255	0/0:22,0:22:42.13:0,42,648	0/0:29,0:25:48.14:0,48,704	0/0:20,0:19:26.94:0,27,406	0/0:28,0:27:63.05:0,63,953	0/0:42,0:41:93.32:0,93,1477	0/0:34,0:30:36.12:0,36,559	0/0:25,0:15:30.10:0,30,479	0/0:22,0:16:48.16:0,48,762	0/0:15,0:15:36.12:0,36,568	0/0:45,0:26:39.13:0,39,598	0/0:22,0:15:9.03:0,9,144	0/0:15,0:10:12.04:0,12,179	0/0:35,0:29:48.16:0,48,763	0/0:23,0:22:60.20:0,60,946	0/0:25,0:20:60.19:0,60,934	0/0:32,0:30:72.24:0,72,1135	0/0:8,0:6:3.01:0,3,44
chr10	65117282	.	T	TC	392.93	PASS	AB=0.727;AC=1;AF=0.018;AN=56;BaseQRankSum=5.357;DP=703;FS=2.132;HRun=3;HaplotypeScore=69.4987;InbreedingCoeff=-0.0184;MQ=63.77;MQ0=12;MQRankSum=-4.050;QD=8.19;ReadPosRankSum=-2.936;VQSLOD=-0.1471;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:42:99:0,117,1404	0/0:9,0:9:27.07:0,27,313	0/0:30,0:22:54.15:0,54,635	0/0:22,0:19:37.45:0,37,511	0/0:13,0:13:33.10:0,33,396	0/0:15,0:14:39.12:0,39,467	0/0:23,0:23:66.19:0,66,781	0/1:30,18:40:99:467,0,607	0/0:51,0:48:99:0,114,1368	0/0:20,0:18:51.16:0,51,611	0/0:17,0:14:42.13:0,42,504	0/0:23,0:23:60.18:0,60,720	0/0:24,0:24:63.18:0,63,744	0/0:32,0:32:93.26:0,93,1093	0/0:33,0:32:93.27:0,93,1104	0/0:28,0:28:78.20:0,78,919	0/0:36,0:36:99:0,99,1187	0/0:20,0:20:60.18:0,60,720	0/0:18,0:18:45.12:0,45,527	0/0:16,0:16:45.14:0,45,540	0/0:45,0:45:99:0,123,1475	0/0:27,0:23:63.17:0,63,735	0/0:7,0:7:21.06:0,21,252	0/0:28,0:28:81.25:0,81,971	0/0:21,0:20:57.17:0,57,683	0/0:15,0:13:36.09:0,36,419	0/0:18,0:18:51.16:0,51,612	0/0:20,0:18:54.17:0,54,647
chr10	65117390	.	GC	G	231.15	PASS	AB=0.694;AC=1;AF=0.018;AN=56;BaseQRankSum=5.094;DP=644;FS=1.159;HRun=4;HaplotypeScore=64.4497;InbreedingCoeff=-0.0231;MQ=60.71;MQ0=14;MQRankSum=1.005;QD=5.38;ReadPosRankSum=1.031;VQSLOD=-0.2293;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,114,1580	0/0:4,0:2:6.02:0,6,84	0/0:22,0:15:38.81:0,39,479	0/0:11,0:6:12.03:0,12,136	0/0:30,0:29:69.23:0,69,965	0/0:28,0:27:69.23:0,69,966	0/0:19,0:19:54.18:0,54,756	0/0:31,0:21:51.17:0,51,713	0/1:24,19:42:99:306,0,702	0/0:24,0:23:69.22:0,69,951	0/0:16,0:15:42.14:0,42,587	0/0:26,0:26:69.23:0,69,965	0/0:26,0:25:72.24:0,72,1007	0/0:34,0:34:90.30:0,90,1261	0/0:27,0:27:75.25:0,75,1037	0/0:19,0:19:45.15:0,45,625	0/0:24,0:24:72.24:0,72,1006	0/0:21,0:21:54.17:0,54,739	0/0:14,0:14:36.12:0,36,500	0/0:25,0:24:60.20:0,60,838	0/0:33,0:32:81.23:0,81,1112	0/0:15,0:14:39.13:0,39,543	0/0:24,0:23:60.20:0,60,840	0/0:20,0:19:51.17:0,51,713	0/0:22,0:21:63.16:0,63,844	0/0:15,0:14:42.08:0,42,549	0/0:20,0:20:48.13:0,48,634	0/0:9,0:9:24.08:0,24,336
chr10	65117483	.	TGC	T	149.67	PASS	AB=0.698;AC=1;AF=0.019;AN=52;BaseQRankSum=5.325;DP=672;FS=10.463;HRun=0;HaplotypeScore=94.3879;InbreedingCoeff=-0.0213;MQ=39.57;MQ0=81;MQRankSum=-3.332;QD=4.99;ReadPosRankSum=-1.501;VQSLOD=1.8610;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:47:93.31:0,93,1797	0/0:12,0:12:30.10:0,30,575	./.	./.	0/0:31,0:20:21.52:0,22,388	0/0:24,0:22:36.12:0,36,723	0/0:28,0:25:44.61:0,45,856	0/1:17,13:12:99:224,0,146	0/0:32,0:27:66.23:0,66,1324	0/0:18,0:14:42.14:0,42,800	0/0:13,0:9:15.05:0,15,297	0/0:23,0:23:54.06:0,54,996	0/0:22,0:22:45:0,45,887	0/0:27,0:26:60.16:0,60,1069	0/0:26,0:26:50.89:0,51,996	0/0:29,0:27:72.06:0,72,1367	0/0:23,0:22:41.91:0,42,813	0/0:23,0:19:45.15:0,45,913	0/0:18,0:10:30.08:0,30,548	0/0:23,0:18:41.51:0,42,844	0/0:57,0:47:99:0,99,1855	0/0:29,0:21:20.58:0,21,417	0/0:13,0:12:15.04:0,15,267	0/0:27,0:24:35.95:0,36,730	0/0:27,0:24:29.52:0,30,578	0/0:19,0:14:42.11:0,42,808	0/0:15,0:14:33.11:0,33,668	0/0:11,0:10:27.09:0,27,546
chr10	65117486	.	T	TA	172.14	PASS	AB=0.702;AC=1;AF=0.019;AN=52;BaseQRankSum=4.464;DP=674;FS=12.683;HRun=0;HaplotypeScore=88.0959;InbreedingCoeff=-0.0208;MQ=39.72;MQ0=81;MQRankSum=-3.632;QD=5.22;ReadPosRankSum=-0.497;VQSLOD=1.8961;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:47:96.09:0,96,1210	0/0:12,0:12:30.06:0,30,397	./.	./.	0/0:31,0:20:20.90:0,21,293	0/0:23,0:22:39.07:0,39,506	0/0:27,0:24:42.45:0,42,501	0/1:19,14:13:86.79:246,0,87	0/0:34,0:29:65.93:0,66,879	0/0:18,0:14:42.14:0,42,587	0/0:15,0:11:20.98:0,21,235	0/0:25,0:25:59.97:0,60,761	0/0:22,0:22:45.11:0,45,608	0/0:26,0:25:54.06:0,54,689	0/0:25,0:25:51.13:0,51,713	0/0:28,0:26:69.11:0,69,899	0/0:24,0:23:44.94:0,45,628	0/0:25,0:21:48.14:0,48,649	0/0:17,0:9:27.05:0,27,355	0/0:23,0:18:45.54:0,46,586	0/0:58,0:48:99:0,105,1331	0/0:28,0:21:22.11:0,22,275	0/0:12,0:11:15.05:0,15,210	0/0:26,0:24:39.10:0,39,524	0/0:26,0:23:27.01:0,27,335	0/0:18,0:13:39.12:0,39,529	0/0:16,0:14:33.11:0,33,461	0/0:11,0:10:27.09:0,27,377
chr10	65117720	.	G	GCTT	290.59	PASS	AB=0.764;AC=1;AF=0.018;AN=56;BaseQRankSum=4.480;DP=683;FS=3.521;HRun=0;HaplotypeScore=97.9329;InbreedingCoeff=-0.0189;MQ=60.94;MQ0=14;MQRankSum=-3.381;QD=6.92;ReadPosRankSum=-1.475;VQSLOD=2.6869;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:66.23:0,66,1070	0/0:6,0:6:18.06:0,18,280	0/0:22,0:13:29.59:0,30,426	0/0:16,0:8:24.08:0,24,377	0/0:13,0:13:36.12:0,36,568	0/0:16,0:16:48.16:0,48,767	0/0:30,0:30:81.23:0,81,1290	0/0:12,0:7:18.06:0,18,285	0/1:29,13:34:99:365,0,963	0/0:26,0:26:72.25:0,72,1149	0/0:16,0:16:30.09:0,30,458	0/0:24,0:24:63.21:0,63,1006	0/0:17,0:17:45.15:0,45,735	0/0:26,0:26:78.27:0,78,1253	0/0:25,0:25:72.22:0,72,1145	0/0:21,0:21:51.15:0,51,781	0/0:39,0:39:99:0,111,1767	0/0:33,0:33:99:0,99,1587	0/0:26,0:26:63.20:0,63,951	0/0:14,0:14:36.07:0,36,513	0/0:67,0:67:99:0,180,2847	0/0:23,0:23:54.18:0,54,844	0/0:13,0:13:39.12:0,39,598	0/0:42,0:42:99:0,99,1575	0/0:27,0:27:75.22:0,75,1147	0/0:26,0:26:78.25:0,78,1237	0/0:24,0:24:69.23:0,69,1107	0/0:9,0:9:27.06:0,27,386
chr10	65119534	.	T	TCGC	511.36	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-2.508;DP=731;FS=0.000;HRun=0;HaplotypeScore=171.7045;InbreedingCoeff=0.9299;MQ=75.10;MQ0=15;MQRankSum=-1.988;QD=12.78;ReadPosRankSum=0.656;VQSLOD=2.8786;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,159,2825	0/0:15,0:15:36.55:0,37,606	0/0:30,0:27:78.25:0,78,1341	0/0:25,0:25:75.18:0,75,1298	0/0:16,0:16:48.15:0,48,859	0/0:22,0:22:66.21:0,66,1198	0/0:33,0:33:99:0,99,1753	1/1:10,2:4:11.68:80,12,0	1/1:0,26:12:24.08:547,24,0	0/0:20,0:20:60.18:0,60,1033	0/0:12,0:12:33.10:0,33,580	0/0:37,0:37:99:0,111,2001	0/0:28,0:28:84.28:0,84,1530	0/0:32,0:32:96.33:0,96,1768	0/0:37,0:37:99:0,108,1911	0/0:31,0:31:93.29:0,93,1665	0/0:22,0:22:66.23:0,66,1218	0/0:15,0:15:45.13:0,45,804	0/0:31,0:31:84.25:0,84,1424	0/0:14,0:14:42.13:0,42,751	0/0:71,0:71:99:0,208,3731	0/0:22,0:22:63.21:0,63,1137	0/0:14,0:14:42.14:0,42,758	0/0:41,0:41:99:0,123,2240	0/0:20,0:20:57.11:0,57,899	0/0:25,0:25:75.23:0,75,1324	0/0:22,0:22:66.19:0,66,1133	0/0:2,0:2:6.02:0,6,112
chr10	65120027	.	T	TCG	682.42	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=9.159;DP=695;FS=16.323;HRun=0;HaplotypeScore=142.4339;InbreedingCoeff=0.6459;MQ=67.53;MQ0=1;MQRankSum=-6.713;QD=5.88;ReadPosRankSum=-4.181;VQSLOD=1.3156;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:89.94:0,90,918	0/0:8,0:8:22.29:0,22,216	0/0:25,0:20:52.72:0,53,792	0/0:21,0:19:31.11:0,31,616	0/0:18,0:18:51.17:0,51,814	0/0:35,0:35:93.22:0,93,1002	0/0:18,0:18:42.03:0,42,435	1/1:77,7:68:61.81:704,62,0	0/1:32,0:32:84.51:85,0,388	0/0:25,0:25:75.16:0,75,865	0/0:21,0:21:61.65:0,62,605	0/0:19,0:19:45.04:0,45,442	0/0:20,0:20:60.19:0,60,954	0/0:20,0:20:56.92:0,57,592	0/0:16,0:16:48.12:0,48,539	0/0:20,0:20:54.11:0,54,588	0/0:33,0:33:84.05:0,84,861	0/0:14,0:14:32.10:0,32,333	0/0:28,0:27:75.68:0,76,864	0/0:16,0:16:48.07:0,48,479	0/0:26,0:26:72.13:0,72,759	0/0:19,0:19:57.06:0,57,631	0/0:22,0:22:60.20:0,60,975	0/0:19,0:19:57.19:0,57,926	0/0:26,0:26:66.16:0,66,743	0/0:26,0:26:75.17:0,75,829	0/0:41,0:41:99:0,105,1062	0/0:11,0:11:33.05:0,33,339
chr10	65120029	.	G	GT	15044.67	PASS	AB=1.000;AC=45;AF=0.804;AN=56;BaseQRankSum=-8.113;DP=702;FS=0.878;HRun=7;HaplotypeScore=78.9315;InbreedingCoeff=0.8851;MQ=66.94;MQ0=3;MQRankSum=-1.981;QD=25.29;ReadPosRankSum=0.986;VQSLOD=5.4026;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,32:32:90.28:1087,90,0	1/1:1,7:8:24.07:283,24,0	0/0:23,0:18:31.02:0,31,327	0/1:20,0:17:34.08:34,0,198	0/0:20,0:20:54.08:0,54,521	1/1:3,31:34:84.26:1015,84,0	1/1:3,15:18:37:437,37,0	1/1:48,34:65:99:1041,105,0	1/1:4,27:31:72.22:870,72,0	1/1:3,22:25:66.20:797,66,0	1/1:1,20:21:60.18:716,60,0	1/1:1,20:21:45.14:543,45,0	0/0:21,0:20:57.08:0,57,545	1/1:1,19:20:54.17:652,54,0	1/1:2,14:16:42.13:507,42,0	1/1:2,18:20:48.15:580,48,0	1/1:2,34:36:78.24:942,78,0	1/1:6,12:18:20.65:253,21,0	1/1:4,25:28:69.13:809,69,0	1/1:2,16:17:48.07:548,48,0	1/1:3,23:26:60.18:721,60,0	1/1:4,14:18:39.12:471,39,0	0/0:23,0:23:60.08:0,60,574	0/0:20,0:20:51.08:0,51,493	1/1:3,23:26:57.17:689,57,0	1/1:3,22:25:66.17:781,66,0	1/1:9,33:42:81.25:978,81,0	1/1:1,8:9:24.07:290,24,0
chr10	65120181	.	G	GA	371.73	PASS	AB=0.923;AC=3;AF=0.054;AN=56;BaseQRankSum=6.759;DP=641;FS=6.540;HRun=0;HaplotypeScore=61.9578;InbreedingCoeff=0.6362;MQ=71.97;MQ0=0;MQRankSum=-1.501;QD=7.43;ReadPosRankSum=-2.185;VQSLOD=1.7726;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,160,2222	0/0:6,0:6:15.05:0,15,208	0/0:21,0:21:63.14:0,63,807	0/0:19,0:18:48.13:0,48,638	0/0:20,0:20:60.20:0,60,839	0/0:22,0:21:66.21:0,66,906	0/0:31,0:31:87.27:0,87,1181	1/1:16,10:22:21.01:238,21,0	0/1:22,2:24:99:238,0,320	0/0:26,0:26:75.23:0,75,1030	0/0:16,0:15:42.14:0,42,584	0/0:19,0:19:51.15:0,51,694	0/0:12,0:12:36.12:0,36,503	0/0:15,0:15:45.15:0,45,620	0/0:17,0:17:51.17:0,51,713	0/0:20,0:20:60.20:0,60,839	0/0:61,0:61:99:0,169,2349	0/0:31,0:31:93.27:0,93,1262	0/0:21,0:21:63.20:0,63,862	0/0:13,0:13:36.12:0,36,503	0/0:40,0:40:99:0,117,1634	0/0:13,0:13:33.11:0,33,461	0/0:16,0:16:48.16:0,48,671	0/0:35,0:34:99:0,102,1425	0/0:16,0:16:48.15:0,48,656	0/0:24,0:24:72.23:0,72,989	0/0:15,0:15:42.14:0,42,584	0/0:9,0:9:27.09:0,27,378
chr10	65120420	.	C	CAA	3752.30	PASS	AB=0.843;AC=42;AF=0.750;AN=56;BaseQRankSum=-1.691;DP=451;FS=1.573;HRun=14;HaplotypeScore=71.8252;InbreedingCoeff=0.4856;MQ=52.46;MQ0=19;MQRankSum=-2.352;QD=10.09;ReadPosRankSum=-3.408;VQSLOD=1.4463;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:12,8:17:14.92:313,15,0	1/1:6,3:9:9.03:118,9,0	0/0:11,0:6:2.81:0,3,29	0/1:16,0:9:17.61:44,0,18	0/0:22,0:22:26.48:0,26,217	1/1:9,6:9:9.03:118,9,0	1/1:8,4:12:22.26:223,22,0	1/1:39,5:36:76.53:691,77,0	0/0:8,0:11:4.85:0,5,77	1/1:8,7:10:22.59:215,23,0	1/1:7,4:14:5.72:170,6,0	1/1:5,11:12:6.02:79,6,0	0/0:15,0:10:11.20:0,11,141	1/1:7,8:10:14.34:142,14,0	1/1:9,4:9:3.48:41,3,0	1/1:6,8:12:13.34:122,13,0	1/1:10,0:15:4.64:17,5,0	0/1:4,4:8:3.87:192,0,4	1/1:3,5:6:14.41:165,14,0	1/1:5,3:13:24.48:200,24,0	1/1:4,4:7:14.07:162,14,0	1/1:15,4:17:17.53:188,18,0	0/1:11,0:11:3.83:4,0,127	0/0:15,0:11:14.90:0,15,124	0/1:11,2:14:7.82:119,0,8	1/1:10,9:19:20.80:223,21,0	1/1:11,8:10:6.02:79,6,0	1/1:7,3:9:14.01:128,14,0
chr10	65121731	.	CT	C	2014.48	PASS	AB=0.585;AC=1;AF=0.018;AN=56;BaseQRankSum=11.794;DP=753;FS=4.433;HRun=4;HaplotypeScore=74.0145;InbreedingCoeff=-0.0183;MQ=57.97;MQ0=9;MQRankSum=-6.568;QD=19.56;ReadPosRankSum=-5.424;VQSLOD=2.1759;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:43:99:0,123,1721	0/0:12,0:12:36.09:0,36,484	0/0:18,0:11:30.09:0,30,396	0/0:25,0:13:27.09:0,27,378	0/0:18,0:18:48.16:0,48,670	0/0:22,0:22:66.21:0,66,908	0/0:22,0:22:63.13:0,63,804	0/1:30,73:91:99:2089,0,407	0/0:53,0:53:99:0,153,2123	0/0:15,0:15:39.13:0,39,546	0/0:16,0:16:45.14:0,45,612	0/0:29,0:29:87.29:0,87,1218	0/0:22,0:22:66.22:0,66,924	0/0:17,0:17:51.16:0,51,697	0/0:31,0:31:90.28:0,90,1242	0/0:23,0:23:69.23:0,69,966	0/0:36,0:36:99:0,99,1364	0/0:25,0:25:72.24:0,72,1008	0/0:21,0:21:63.21:0,63,881	0/0:21,0:20:57.16:0,57,775	0/0:26,0:25:66.22:0,66,924	0/0:18,0:18:51.17:0,51,714	0/0:20,0:20:57.19:0,57,798	0/0:30,0:30:84.27:0,84,1154	0/0:17,0:17:45.13:0,45,610	0/0:33,0:32:93.31:0,93,1302	0/0:26,0:26:75.23:0,75,1021	0/0:10,0:10:30.10:0,30,420
chr10	65121809	.	CGTT	C	1133.42	PASS	AB=0.670;AC=1;AF=0.018;AN=56;BaseQRankSum=7.344;DP=827;FS=0.000;HRun=0;HaplotypeScore=110.7590;InbreedingCoeff=-0.0215;MQ=57.46;MQ0=17;MQRankSum=0.405;QD=18.58;ReadPosRankSum=0.937;VQSLOD=3.4592;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:64,0:62:99:0,175,3798	0/0:9,0:9:27.09:0,27,595	0/0:22,0:3:9.03:0,9,127	0/0:25,0:6:12.04:0,12,256	0/0:23,0:23:51.18:0,51,1126	0/0:23,0:23:66.18:0,66,1387	0/0:30,0:29:87.23:0,87,1775	0/0:78,0:77:99:0,208,4385	0/1:31,30:61:99:1208,0,1691	0/0:20,0:19:48.16:0,48,1038	0/0:15,0:14:32.70:0,33,727	0/0:25,0:25:72.21:0,72,1526	0/0:26,0:26:72.25:0,72,1566	0/0:15,0:15:39.13:0,39,846	0/0:34,0:34:96.32:0,96,2045	0/0:23,1:24:24.05:0,24,1430	0/0:45,0:45:99:0,129,2831	0/0:28,0:28:78.27:0,78,1722	0/0:17,0:16:33.11:0,33,709	0/0:23,0:23:60.21:0,60,1280	0/0:44,0:40:99:0,114,2516	0/0:29,0:27:78.25:0,78,1679	0/0:19,0:19:48.64:0,49,1059	0/0:38,0:38:99:0,102,2247	0/0:19,0:17:51.16:0,51,1061	0/0:30,0:29:66.23:0,66,1432	0/0:32,0:31:84.29:0,84,1852	0/0:9,0:9:27.09:0,27,562
chr10	65122224	.	TC	T	245.93	PASS	AB=0.726;AC=1;AF=0.018;AN=56;BaseQRankSum=0.838;DP=593;FS=8.305;HRun=7;HaplotypeScore=119.6622;InbreedingCoeff=-0.0238;MQ=71.43;MQ0=4;MQRankSum=-3.584;QD=4.64;ReadPosRankSum=-2.745;VQSLOD=-0.3143;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:84.13:0,84,1005	0/0:8,0:8:21.07:0,21,265	0/0:26,0:22:40.33:0,40,437	0/0:20,0:19:4.95:0,5,286	0/0:30,0:30:84.07:0,84,1004	0/0:14,0:14:33.10:0,33,403	0/0:11,0:11:33.11:0,33,416	0/1:33,20:39:98.86:320,0,99	0/0:28,0:20:56.71:0,57,611	0/0:23,0:23:66.21:0,66,821	0/0:23,0:22:60.18:0,60,742	0/0:14,0:14:13.51:0,14,392	0/0:19,0:19:54.17:0,54,678	0/0:17,0:17:51.16:0,51,641	0/0:15,0:15:39.12:0,39,491	0/0:23,0:23:63.09:0,63,734	0/0:19,0:19:48.14:0,48,593	0/0:22,0:22:57.16:0,57,690	0/0:22,0:22:57.14:0,57,688	0/0:26,0:26:78.22:0,78,955	0/0:14,0:14:42.13:0,42,529	0/0:17,0:17:51.15:0,51,630	0/0:11,0:11:27.07:0,27,325	0/0:8,0:8:21.05:0,21,252	0/0:15,0:15:39.12:0,39,491	0/0:20,0:20:54.17:0,54,681	0/0:35,0:35:96.29:0,96,1196	0/0:28,0:28:72.23:0,72,908
chr10	65122242	.	CT	C	7527.30	PASS	AB=0.984;AC=42;AF=0.750;AN=56;BaseQRankSum=4.451;DP=551;FS=1.022;HRun=11;HaplotypeScore=100.1405;InbreedingCoeff=0.7519;MQ=76.78;MQ0=1;MQRankSum=0.041;QD=17.63;ReadPosRankSum=2.659;VQSLOD=5.2804;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,29:31:77.89:640,78,0	1/1:0,9:9:23.97:197,24,0	0/1:28,1:23:11.30:11,0,146	0/1:18,0:17:13.57:14,0,98	0/0:26,0:27:44.87:0,45,660	1/1:0,13:13:38.96:320,39,0	1/1:3,8:11:23.89:197,24,0	0/0:37,2:15:3.59:0,4,45	0/0:16,1:18:6.86:0,7,123	1/1:3,20:23:59.80:487,60,0	1/1:2,20:21:50.87:418,51,0	1/1:0,10:10:29.96:246,30,0	0/0:16,1:18:8.31:0,8,278	1/1:7,10:17:29.83:246,30,0	1/1:1,12:13:32.96:271,33,0	1/1:6,15:21:44.86:369,45,0	1/1:0,17:18:43.99:351,44,0	1/1:1,16:17:44.94:369,45,0	1/1:4,22:25:59.82:487,60,0	1/1:4,20:24:59.87:492,60,0	1/1:3,9:12:26.92:221,27,0	1/1:1,11:12:29.94:246,30,0	0/0:11,0:11:24.06:0,24,256	0/0:5,0:5:15.04:0,15,158	1/1:0,18:18:44.94:369,45,0	1/1:3,16:19:47.82:394,48,0	1/1:3,29:32:80.85:665,81,0	1/1:6,24:30:62.85:517,63,0
chr10	65122270	.	C	CT	207.90	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=0.718;DP=525;FS=8.091;HRun=5;HaplotypeScore=96.9682;InbreedingCoeff=0.8768;MQ=63.79;MQ0=4;MQRankSum=-3.929;QD=4.62;ReadPosRankSum=1.703;VQSLOD=-0.2465;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:69.17:0,69,741	0/0:10,0:10:27.07:0,27,290	0/0:24,0:17:35.10:0,35,310	0/0:12,0:9:20.22:0,20,184	0/0:26,0:26:69.17:0,69,740	0/0:16,0:16:42.05:0,42,429	0/0:4,0:4:11.96:0,12,114	1/1:10,15:3:3.01:39,3,0	1/1:7,13:10:21.07:276,21,0	0/0:20,0:20:57.14:0,57,607	0/0:20,0:20:57.11:0,57,600	0/0:17,0:17:48.12:0,48,514	0/0:14,0:14:36.08:0,36,384	0/0:16,0:16:41.92:0,42,424	0/0:20,0:20:51.07:0,51,524	0/0:20,0:20:54.09:0,54,568	0/0:18,0:18:51.13:0,51,548	0/0:22,0:20:57.11:0,57,600	0/0:20,0:19:57.13:0,57,600	0/0:29,0:29:81.20:0,81,870	0/0:13,0:13:39.08:0,39,410	0/0:13,0:13:27.06:0,27,283	0/0:11,0:11:33.04:0,33,342	0/0:7,0:7:18.04:0,18,193	0/0:21,0:21:63.13:0,63,667	0/0:24,0:24:69.15:0,69,721	0/0:32,0:32:93.22:0,93,991	0/0:23,0:21:57.14:0,57,613
chr10	65124618	.	GT	G	1332.97	PASS	AB=0.647;AC=1;AF=0.018;AN=56;BaseQRankSum=6.652;DP=791;FS=9.572;HRun=2;HaplotypeScore=78.1591;InbreedingCoeff=-0.0185;MQ=58.44;MQ0=12;MQRankSum=0.803;QD=17.77;ReadPosRankSum=-3.336;VQSLOD=2.1104;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:61,0:60:99:0,175,2585	0/0:10,0:10:27.08:0,27,385	0/0:26,0:19:57.11:0,57,749	0/0:23,0:8:18.06:0,18,267	0/0:17,0:17:51.17:0,51,764	0/0:22,0:22:66.22:0,66,989	0/0:31,0:31:93.32:0,93,1393	0/1:34,41:67:99:1407,0,799	0/0:38,0:36:99:0,99,1483	0/0:28,0:28:84.28:0,84,1259	0/0:24,0:24:72.20:0,72,1054	0/0:27,0:26:75.25:0,75,1124	0/0:24,0:24:69.23:0,69,1032	0/0:31,0:31:93.32:0,93,1393	0/0:29,0:29:84.27:0,84,1238	0/0:27,0:27:81.27:0,81,1214	0/0:26,0:26:78.26:0,78,1166	0/0:29,0:28:81.27:0,81,1211	0/0:21,0:19:57.18:0,57,826	0/0:28,0:28:84.28:0,84,1251	0/0:24,0:24:72.24:0,72,1079	0/0:33,0:33:96.24:0,96,1386	0/0:21,0:21:59.94:0,60,898	0/0:29,0:29:87.28:0,87,1285	0/0:23,0:23:69.22:0,69,1014	0/0:31,0:31:93.28:0,93,1353	0/0:19,0:18:48.16:0,48,718	0/0:14,0:14:42.14:0,42,625
chr10	65125864	.	T	TA	1102.93	PASS	AB=0.875;AC=48;AF=0.923;AN=52;BaseQRankSum=-0.604;DP=93;FS=0.000;HRun=3;HaplotypeScore=29.3272;InbreedingCoeff=0.2189;MQ=57.80;MQ0=24;MQRankSum=-1.652;QD=12.25;ReadPosRankSum=-1.410;VQSLOD=1.2620;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,4:4:11.99:118,12,0	1/1:1,1:1:3:26,3,0	1/1:1,0:1:3:26,3,0	0/0:2,0:2:2.92:0,3,17	1/1:1,4:2:5.60:42,6,0	1/1:0,1:1:3.01:38,3,0	./.	1/1:3,1:4:8.61:70,9,0	0/1:2,0:2:0:0,0,0	1/1:1,6:3:9.03:105,9,0	1/1:1,2:2:5.98:54,6,0	1/1:0,3:3:8.96:79,9,0	./.	1/1:0,4:2:5.93:39,6,0	1/1:0,3:1:3.01:38,3,0	1/1:0,2:2:6.02:76,6,0	1/1:2,1:3:3.01:32,3,0	1/1:2,0:2:0.47:1,0,0	1/1:3,2:3:2.51:25,3,0	1/1:2,4:3:6.02:72,6,0	1/1:2,1:3:2.87:32,3,0	1/1:2,3:5:11.91:98,12,0	1/1:1,1:2:2.97:20,3,0	1/1:1,0:1:0.47:1,0,0	1/1:1,3:2:5.38:46,5,0	0/1:2,1:2:0:0,0,0	1/1:3,6:5:11.99:115,12,0	1/1:0,3:3:3.01:38,3,0
chr10	65125875	.	GGA	G	450.12	PASS	AB=0.750;AC=21;AF=0.875;AN=24;BaseQRankSum=-0.919;DP=27;FS=0.000;HRun=0;HaplotypeScore=35.8533;InbreedingCoeff=0.0316;MQ=112.57;MQ0=2;MQRankSum=-1.531;QD=21.43;ReadPosRankSum=0.510;VQSLOD=3.2599;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,3:3:9.03:138,9,0	./.	0/1:2,0:3:5.19:5,0,6	0/0:3,0:2:0:0,0,0	1/1:0,1:1:3.01:41,3,0	./.	./.	1/1:3,1:4:8.99:81,9,0	./.	1/1:0,2:1:3.01:47,3,0	./.	1/1:1,0:1:2.99:24,3,0	./.	./.	./.	./.	1/1:0,1:1:3.01:45,3,0	./.	1/1:1,0:1:3:27,3,0	./.	1/1:0,1:1:3.01:37,3,0	1/1:1,2:3:6.01:62,6,0	1/1:1,0:1:2.96:19,3,0	./.	./.	./.	./.	./.
chr10	65125889	.	GA	G	244.67	PASS	AC=14;AF=0.636;AN=22;BaseQRankSum=1.639;DP=43;FS=0.000;HRun=1;HaplotypeScore=38.3336;InbreedingCoeff=0.4093;MQ=96.91;MQ0=10;MQRankSum=-3.231;QD=13.59;ReadPosRankSum=1.920;VQSLOD=2.5573;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,0:3:7.59:29,8,0	./.	0/0:5,0:4:11.21:0,11,97	./.	1/1:2,0:1:3.01:40,3,0	./.	./.	1/1:1,4:5:11.97:138,12,0	./.	1/1:3,0:1:2.96:19,3,0	./.	./.	1/1:0,1:1:3.01:37,3,0	./.	./.	./.	1/1:1,0:1:3.01:31,3,0	./.	0/0:1,1:1:2.60:0,3,10	./.	./.	1/1:3,0:2:3.01:41,3,0	0/0:1,0:1:0.47:0,0,1	./.	./.	0/0:1,0:1:0.89:0,1,2	./.	./.
chr10	65125891	.	GAC	G	83.26	PASS	AC=14;AF=0.700;AN=20;BaseQRankSum=1.591;DP=48;FS=0.000;HRun=0;HaplotypeScore=41.4908;InbreedingCoeff=0.3313;MQ=98.78;MQ0=14;MQRankSum=-3.005;QD=5.20;ReadPosRankSum=1.591;VQSLOD=2.0399;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:5,0:4:11.25:0,11,121	0/0:6,0:4:2.97:0,3,9	1/1:0,2:1:3:29,3,0	./.	./.	1/1:5,0:5:3.71:22,4,0	./.	0/0:3,0:1:0:0,0,0	./.	./.	1/1:2,0:1:2.96:19,3,0	./.	./.	./.	1/1:1,0:1:3.01:33,3,0	./.	./.	./.	./.	1/1:2,2:2:3.01:31,3,0	1/1:0,1:1:2.90:16,3,0	./.	./.	1/1:1,0:1:2.96:19,3,0	./.	./.
chr10	65126679	.	CA	C	1098.92	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.029;DP=875;FS=1.422;HRun=1;HaplotypeScore=97.5061;InbreedingCoeff=0.9955;MQ=60.92;MQ0=6;MQRankSum=-5.257;QD=18.32;ReadPosRankSum=-4.648;VQSLOD=2.5053;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,105,1673	0/0:12,0:12:27.09:0,27,431	0/0:34,0:20:51.13:0,51,767	0/0:24,0:12:35.58:0,36,505	0/0:18,0:18:45.15:0,45,711	0/0:24,0:24:64.65:0,65,1048	0/0:47,0:46:99:0,111,1770	1/1:20,40:49:93.21:1194,93,0	0/0:39,0:33:90.31:0,90,1426	0/0:41,0:40:99:0,114,1780	0/0:14,0:14:24.08:0,24,382	0/0:43,0:43:99:0,129,2013	0/0:29,0:29:84.24:0,84,1269	0/0:43,0:43:99:0,117,1770	0/0:38,0:38:99:0,114,1812	0/0:35,0:35:99:0,105,1654	0/0:38,0:38:99:0,111,1767	0/0:17,0:17:48.14:0,48,741	0/0:16,0:16:48.16:0,48,767	0/0:26,0:26:45.15:0,45,718	0/0:73,0:72:99:0,205,3185	0/0:22,0:19:42.14:0,42,671	0/0:13,0:12:33.11:0,33,524	0/0:48,0:48:99:0,126,1959	0/0:20,0:19:42.14:0,42,658	0/0:30,0:30:87.29:0,87,1366	0/0:19,0:19:57.18:0,57,884	0/0:9,0:9:27.09:0,27,431
chr10	65126778	.	C	CA	1786.43	PASS	AB=0.739;AC=4;AF=0.077;AN=52;BaseQRankSum=1.042;DP=838;FS=5.114;HRun=2;HaplotypeScore=87.3874;InbreedingCoeff=-0.0885;MQ=41.87;MQ0=127;MQRankSum=-9.574;QD=10.63;ReadPosRankSum=-4.574;VQSLOD=0.0186;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:44,11:47:81.25:0,81,1004	0/0:9,8:11:20.93:0,21,260	./.	./.	0/0:12,0:11:12.04:0,12,149	0/0:19,0:18:36.11:0,36,446	0/0:26,7:26:48.15:0,48,594	0/1:20,60:49:19.35:1524,0,19	0/0:36,5:35:47.01:0,47,1019	0/1:23,13:29:99:305,0,622	0/0:4,6:7:3.01:0,3,37	0/0:39,0:37:81.24:0,81,991	0/0:33,0:33:75.20:0,75,929	0/0:37,3:39:84.22:0,84,1011	0/0:28,3:28:69.22:0,69,855	0/0:28,1:28:72.23:0,72,893	0/0:21,2:21:39.12:0,39,483	0/0:17,12:25:36.11:0,36,444	0/1:17,5:13:7.60:8,0,345	0/0:15,8:15:24.55:0,25,298	0/0:33,9:31:57.16:0,57,706	0/0:18,4:17:24.08:0,24,297	0/0:20,0:15:27.08:0,27,330	0/0:41,0:39:93.28:0,93,1139	0/0:21,8:23:39.12:0,39,483	0/1:24,6:26:54.32:54,0,743	0/0:23,5:27:60.15:0,60,715	0/0:5,3:7:6.02:0,6,74
chr10	65126911	.	C	CG	32.57	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-1.396;DP=771;FS=5.876;HRun=0;HaplotypeScore=110.8777;InbreedingCoeff=0.9327;MQ=59.74;MQ0=10;MQRankSum=-2.493;QD=0.99;ReadPosRankSum=-0.861;VQSLOD=1.8452;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,117,1632	0/0:11,0:11:30.10:0,30,418	0/0:18,0:17:51.10:0,51,680	0/0:18,0:16:39.08:0,39,510	0/0:20,0:20:54.17:0,54,737	0/0:17,0:17:48.16:0,48,670	0/0:37,0:37:99:0,105,1466	1/1:12,21:14:9:116,9,0	0/0:34,0:34:96.31:0,96,1323	0/0:35,0:35:99:0,102,1399	0/0:10,0:10:27.09:0,27,376	0/0:36,0:36:99:0,99,1382	0/0:40,0:40:99:0,117,1635	0/0:32,0:32:90.27:0,90,1222	0/0:41,0:41:99:0,123,1685	0/0:24,0:24:69.22:0,69,947	0/0:44,0:43:99:0,126,1757	0/0:23,0:23:69.19:0,69,927	0/0:18,0:17:51.17:0,51,712	0/0:14,0:14:39.13:0,39,545	0/0:85,0:85:99:0,253,3491	0/0:33,0:33:93.30:0,93,1282	0/0:13,0:13:33.11:0,33,459	0/0:23,0:23:60.18:0,60,819	0/0:22,0:22:66.22:0,66,922	0/0:27,0:27:78.26:0,78,1090	0/0:15,0:15:39.13:0,39,544	0/0:7,0:7:21.07:0,21,294
chr10	65127003	.	C	CA	1280.38	PASS	AB=0.613;AC=1;AF=0.018;AN=56;BaseQRankSum=4.593;DP=1094;FS=28.461;HRun=1;HaplotypeScore=83.0597;InbreedingCoeff=-0.0236;MQ=48.70;MQ0=66;MQRankSum=-4.607;QD=13.48;ReadPosRankSum=-3.118;VQSLOD=0.6871;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:40:81.26:0,81,1046	0/0:13,0:12:27.09:0,27,346	0/0:17,0:1:2.99:0,3,24	0/0:31,0:5:15.03:0,15,172	0/0:18,0:18:39.12:0,39,495	0/0:33,0:28:51.15:0,51,646	0/0:60,0:57:75.23:0,75,953	0/1:35,60:64:99:1355,0,710	0/0:47,0:43:99:0,114,1467	0/0:43,0:40:99:0,120,1557	0/0:10,0:10:18.06:0,18,233	0/0:48,0:45:84.27:0,84,1086	0/0:38,0:38:96.28:0,96,1212	0/0:48,0:47:96.06:0,96,1235	0/0:49,0:43:78.24:0,78,994	0/0:37,0:31:66.21:0,66,856	0/0:44,0:41:75.23:0,75,958	0/0:41,0:37:72.23:0,72,935	0/0:40,0:36:99:0,108,1384	0/0:18,0:17:30.08:0,30,375	0/0:149,0:137:99:0,220,2825	0/0:26,0:24:27.09:0,27,342	0/0:17,0:16:30.08:0,30,374	0/0:35,0:35:75.13:0,75,973	0/0:26,0:26:54.11:0,54,667	0/0:32,0:29:75.23:0,75,961	0/0:29,0:26:33.11:0,33,424	0/0:7,0:6:9.03:0,9,117
chr10	65127253	.	G	GA	242.85	PASS	AC=4;AF=0.080;AN=50;BaseQRankSum=-0.553;DP=856;FS=19.085;HRun=0;HaplotypeScore=73.5601;InbreedingCoeff=0.5477;MQ=20.11;MQ0=327;MQRankSum=-2.237;QD=2.53;ReadPosRankSum=-1.247;VQSLOD=0.9230;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:27:12:0,12,145	0/0:11,0:9:21.07:0,21,291	./.	./.	0/0:22,0:21:21.07:0,21,292	0/0:25,0:8:3.01:0,3,42	./.	1/1:61,12:17:29.45:312,29,0	1/1:23,0:11:5.66:39,6,0	0/0:41,0:24:66.18:0,66,893	0/0:16,0:15:15.05:0,15,202	0/0:34,0:19:5.78:0,6,78	0/0:17,0:11:6.02:0,6,73	0/0:30,0:18:9.03:0,9,125	0/0:38,0:15:11.75:0,12,145	0/0:42,0:18:5.79:0,6,83	0/0:35,0:15:12.04:0,12,162	0/0:31,0:10:12.04:0,12,167	0/0:23,0:7:15.03:0,15,191	0/0:22,0:18:36.12:0,36,495	0/0:68,0:17:3.01:0,3,42	0/0:33,0:31:32.72:0,33,415	0/0:11,0:11:9.03:0,9,119	0/0:34,0:8:12.04:0,12,167	0/0:19,0:17:23.65:0,24,289	0/0:33,0:16:45.11:0,45,603	0/0:23,0:12:11.56:0,12,166	0/0:7,0:2:6.02:0,6,83
chr10	65127290	.	T	TG	6182.43	PASS	AB=0.625;AC=42;AF=0.808;AN=52;BaseQRankSum=-2.692;DP=813;FS=1.837;HRun=2;HaplotypeScore=67.7774;InbreedingCoeff=0.5986;MQ=23.51;MQ0=301;MQRankSum=-1.972;QD=8.78;ReadPosRankSum=3.492;VQSLOD=2.6423;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,35:24:18.02:235,18,0	1/1:2,7:6:12.04:171,12,0	./.	./.	0/0:13,0:13:11.93:0,12,112	1/1:0,23:11:15.05:215,15,0	1/1:1,45:11:5.83:61,6,0	0/1:45,43:16:58.01:372,0,58	0/1:10,27:19:99:173,0,115	1/1:3,43:28:84.27:1188,84,0	1/1:0,8:7:12.04:172,12,0	1/1:2,31:19:12.51:172,13,0	0/0:15,0:13:23.94:0,24,258	1/1:2,29:19:9:130,9,0	1/1:1,28:15:11.97:147,12,0	1/1:0,37:21:12.44:148,12,0	1/1:2,31:17:18.06:258,18,0	1/1:2,28:12:9.03:129,9,0	1/1:2,15:8:21:241,21,0	1/1:0,15:14:33.02:441,33,0	1/1:9,62:14:3.01:43,3,0	1/1:2,17:16:15.05:215,15,0	0/0:14,0:12:9.46:0,9,95	0/0:28,0:11:11.95:0,12,114	1/1:0,17:13:23.84:267,24,0	1/1:2,34:21:60.17:837,60,0	1/1:2,33:24:33.25:439,33,0	1/1:1,6:3:9.03:129,9,0
chr10	65127327	.	GGT	G	278.13	PASS	AB=0.960;AC=23;AF=0.605;AN=38;BaseQRankSum=0.857;DP=744;FS=1.302;HRun=0;HaplotypeScore=92.7920;InbreedingCoeff=0.1601;MQ=27.37;MQ0=248;MQRankSum=-0.913;QD=0.63;ReadPosRankSum=-0.014;VQSLOD=1.5250;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:45,5:32:15.37:123,15,0	1/1:8,1:6:3.01:32,3,0	./.	./.	0/1:13,3:15:44.83:45,0,132	./.	./.	0/0:60,0:10:2.99:0,3,24	0/1:40,0:24:25.93:26,0,208	./.	./.	1/1:25,0:18:0.26:0,0,0	0/0:12,0:11:2.97:0,3,20	0/1:28,0:19:0.17:0,0,0	1/1:27,0:18:2.84:14,3,0	1/1:28,0:20:8.54:43,9,0	0/1:23,0:15:0:0,0,0	1/1:23,0:11:2.84:14,3,0	./.	0/1:11,0:11:0:0,0,0	0/1:67,0:17:0:0,0,0	1/1:14,0:11:2.83:20,3,0	0/0:13,0:11:2.92:0,3,35	0/1:28,2:17:20.28:20,0,121	0/0:12,0:10:0:0,0,0	./.	1/1:29,1:21:4.90:44,5,0	./.
chr10	65127601	.	CAACA	C	12290.43	PASS	AB=1.000;AC=43;AF=0.768;AN=56;BaseQRankSum=8.154;DP=668;FS=3.151;HRun=0;HaplotypeScore=106.8139;InbreedingCoeff=0.8790;MQ=52.49;MQ0=38;MQRankSum=-0.477;QD=21.60;ReadPosRankSum=1.672;VQSLOD=4.3962;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:17,13:38:6.33:859,6,0	1/1:3,5:8:15.05:247,15,0	0/1:24,0:17:0.98:1,0,340	0/0:17,0:12:15.35:0,15,306	0/0:17,0:17:39.13:0,39,934	1/1:5,12:15:24.08:395,24,0	1/1:12,11:20:21.07:345,21,0	1/1:105,0:53:44.42:758,44,0	0/0:7,0:5:2.97:0,3,20	1/1:8,13:21:36.12:579,36,0	1/1:7,13:19:33.11:534,33,0	1/1:3,10:12:29.93:458,30,0	0/0:12,0:12:33.11:0,33,803	1/1:2,17:17:48.16:789,48,0	1/1:6,19:24:42.14:690,42,0	1/1:5,14:18:33.11:542,33,0	1/1:12,18:28:42.14:689,42,0	1/1:12,24:35:71.91:1145,72,0	1/1:13,7:15:15.04:223,15,0	1/1:6,19:25:51.17:837,51,0	1/1:4,8:12:15.05:247,15,0	1/1:4,14:18:30.01:490,30,0	0/0:21,0:21:51.17:0,51,1176	0/0:19,0:19:48.16:0,48,1168	1/1:6,11:17:21.07:345,21,0	1/1:3,31:33:87.28:1379,87,0	1/1:9,10:16:21.07:345,21,0	1/1:3,13:16:24.08:395,24,0
chr10	65127602	.	AAC	A	919.33	PASS	AB=0.984;AC=22;AF=0.393;AN=56;BaseQRankSum=16.447;DP=657;FS=24.878;HRun=0;HaplotypeScore=122.3626;InbreedingCoeff=-0.4201;MQ=52.70;MQ0=36;MQRankSum=2.389;QD=1.71;ReadPosRankSum=7.276;VQSLOD=0.3383;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:49,0:39:35.44:35,0,324	0/1:8,0:8:7.70:8,0,108	0/0:24,0:17:42.09:0,42,624	0/0:15,0:11:23.35:0,23,444	0/0:16,0:16:48.15:0,48,863	0/1:16,1:15:55.55:56,0,61	0/1:23,0:20:2.26:2,0,252	0/1:100,3:51:99:297,0,501	0/0:12,0:5:11.40:0,11,139	0/1:19,2:21:74.48:74,0,217	0/1:19,0:18:40.15:40,0,100	0/1:13,0:12:24.06:24,0,51	0/0:12,0:12:36.12:0,36,675	1/1:19,0:17:29.07:83,29,0	0/1:24,1:24:52.57:53,0,135	0/1:18,0:17:27.80:28,0,103	0/1:29,0:27:25.01:25,0,210	0/1:34,0:33:99:100,0,118	0/1:19,1:15:10.28:10,0,318	0/1:25,0:25:58.38:58,0,145	0/1:12,0:12:4.84:5,0,155	0/1:18,0:18:31.66:32,0,78	0/0:21,0:21:63.21:0,63,1134	0/0:19,0:19:54.18:0,54,1006	0/1:16,1:17:27.39:27,0,181	0/1:33,0:32:4.66:100,0,5	0/1:18,0:16:5.44:5,0,205	0/1:16,0:16:17.69:18,0,108
chr10	65127927	.	AAG	A	8253.26	PASS	AB=0.667;AC=39;AF=0.722;AN=54;BaseQRankSum=2.380;DP=803;FS=17.947;HRun=0;HaplotypeScore=108.1511;InbreedingCoeff=0.7901;MQ=60.83;MQ0=17;MQRankSum=1.032;QD=16.98;ReadPosRankSum=4.102;VQSLOD=3.7892;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,22:33:51.10:562,51,0	0/1:4,5:10:47.50:149,0,48	0/0:22,0:16:3:0,3,28	./.	0/0:18,0:17:36.12:0,36,547	1/1:9,12:22:26.91:285,27,0	1/1:11,14:25:39.11:441,39,0	0/0:147,0:134:50.60:0,51,511	0/0:29,0:14:3:0,3,26	1/1:17,11:25:30.55:340,31,0	1/1:7,12:19:24.07:270,24,0	1/1:13,18:31:48.14:543,48,0	0/0:29,2:31:20.25:0,20,725	1/1:6,15:21:39.11:441,39,0	1/1:10,14:24:39.11:441,39,0	1/1:7,14:20:36.10:407,36,0	1/1:3,18:20:51.15:577,51,0	1/1:6,15:20:39.11:439,39,0	1/1:4,6:10:15.04:170,15,0	1/1:16,17:34:15.93:401,16,0	1/1:7,24:31:57.16:645,57,0	1/1:10,14:24:30.08:339,30,0	0/0:22,0:22:36.12:0,36,539	0/0:18,1:19:2.20:0,2,467	1/1:20,19:37:42.12:475,42,0	1/1:14,16:29:11.95:482,12,0	1/1:9,18:27:54.15:610,54,0	1/1:6,7:12:21.06:237,21,0
chr10	65128373	.	T	TAC	511.11	PASS	AB=0.985;AC=4;AF=0.071;AN=56;BaseQRankSum=-2.420;DP=740;FS=1.946;HRun=0;HaplotypeScore=101.8532;InbreedingCoeff=0.6192;MQ=56.06;MQ0=11;MQRankSum=-1.991;QD=5.56;ReadPosRankSum=-0.462;VQSLOD=3.1388;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:31,1:29:2.76:3,0,549	0/0:15,0:16:35.94:0,36,407	0/0:24,0:4:4.83:0,5,40	0/0:22,0:6:0.46:0,0,1	0/0:22,0:22:51.16:0,51,607	0/0:21,0:20:36.11:0,36,428	0/0:28,0:28:66.20:0,66,786	0/1:27,0:21:0.42:18,0,0	1/1:12,21:30:13.51:591,14,0	0/0:30,0:29:42.12:0,42,491	0/0:16,0:16:39.12:0,39,464	0/0:30,0:29:66.16:0,66,765	0/0:35,0:35:74.81:0,75,892	0/0:27,0:28:57.01:0,57,657	0/0:38,0:38:99:0,99,1158	0/0:31,0:31:72.22:0,72,858	0/0:30,0:30:69.17:0,69,806	0/0:27,0:27:55.64:0,56,710	0/0:17,0:15:33.09:0,33,380	0/0:9,0:9:21.06:0,21,250	0/0:35,0:39:77.90:0,78,884	0/0:28,0:28:48.13:0,48,559	0/0:16,0:13:15.52:0,16,179	0/0:38,0:38:84.24:0,84,988	0/0:27,0:27:63.15:0,63,733	0/0:26,0:26:54.14:0,54,629	0/0:30,0:31:71.98:0,72,806	0/0:15,0:17:32.75:0,33,338
chr10	65129023	.	A	AC	2489.54	PASS	AB=0.594;AC=1;AF=0.018;AN=56;BaseQRankSum=-4.289;DP=903;FS=7.222;HRun=0;HaplotypeScore=90.0915;InbreedingCoeff=-0.0211;MQ=53.91;MQ0=54;MQRankSum=-7.583;QD=19.15;ReadPosRankSum=-5.667;VQSLOD=3.7318;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:62,0:54:99:0,154,2132	0/0:11,0:8:24.08:0,24,335	0/0:30,0:5:14.62:0,15,159	0/0:21,0:4:8.70:0,9,72	0/0:22,0:22:48.16:0,48,671	0/0:22,0:22:54.16:0,54,737	0/0:32,0:30:81.24:0,81,1097	0/1:41,89:98:99:2564,0,1084	0/0:46,0:37:96.60:0,97,889	0/0:25,0:23:60.20:0,60,838	0/0:21,0:19:48.16:0,48,671	0/0:21,0:19:51.17:0,51,711	0/0:24,0:24:57.19:0,57,796	0/0:35,0:30:87.26:0,87,1180	0/0:26,0:22:66.22:0,66,923	0/0:25,0:24:63.21:0,63,880	0/0:36,0:34:99:0,102,1357	0/0:37,0:35:99:0,99,1360	0/0:34,0:33:99:0,99,1360	0/0:24,0:21:54.18:0,54,754	0/0:45,0:42:99:0,126,1687	0/0:30,0:27:69.02:0,69,875	0/0:13,0:13:27.09:0,27,377	0/0:21,0:21:60.19:0,60,823	0/0:26,0:25:69.23:0,69,963	0/0:35,0:32:93.27:0,93,1251	0/0:27,0:25:63.02:0,63,848	0/0:22,0:22:63.19:0,63,849
chr10	65130066	.	G	GAA	5887.50	PASS	AB=0.783;AC=40;AF=0.714;AN=56;BaseQRankSum=3.777;DP=706;FS=1.544;HRun=12;HaplotypeScore=100.1602;InbreedingCoeff=0.5157;MQ=52.47;MQ0=21;MQRankSum=0.370;QD=9.93;ReadPosRankSum=1.282;VQSLOD=3.5403;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,30:46:55.51:756,56,0	1/1:3,9:15:18.05:229,18,0	0/1:61,0:17:2.80:3,0,58	0/1:55,0:9:20.49:20,0,36	0/0:31,0:30:59.04:0,59,475	1/1:6,18:27:32.56:369,33,0	0/1:5,9:15:10.13:160,0,10	0/1:13,3:11:2.94:98,0,3	0/0:18,0:19:30.03:0,30,292	1/1:8,18:25:40.79:501,41,0	1/1:1,13:17:26.39:307,26,0	1/1:20,8:27:33.02:475,33,0	0/0:17,0:19:32.49:0,32,329	1/1:6,7:13:11.99:127,12,0	1/1:7,14:21:26.49:320,26,0	1/1:7,1:13:12:142,12,0	1/1:4,25:30:23.15:271,23,0	1/1:7,17:27:20.53:229,21,0	0/1:10,0:11:27.14:47,0,27	1/1:12,0:33:44.53:181,45,0	1/1:10,0:10:13.43:68,13,0	1/1:9,6:15:32.60:406,33,0	0/0:18,0:16:35.68:0,36,305	0/0:23,0:21:48.25:0,48,413	1/1:3,20:25:35.48:471,35,0	1/1:5,18:25:55.22:599,55,0	0/1:7,1:24:14.35:54,0,14	1/1:5,6:11:5.69:54,6,0
chr10	65130095	.	A	AC	69.56	PASS	AB=0.750;AC=1;AF=0.018;AN=56;BaseQRankSum=3.481;DP=705;FS=14.760;HRun=0;HaplotypeScore=132.1961;InbreedingCoeff=-0.0183;MQ=63.50;MQ0=21;MQRankSum=-2.956;QD=2.90;ReadPosRankSum=-3.074;VQSLOD=1.9420;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:91.48:0,91,1171	0/0:15,0:15:39.10:0,39,517	0/0:84,0:35:55.60:0,56,649	0/0:66,0:19:41.88:0,42,446	0/0:27,0:27:81.20:0,81,1069	0/0:27,0:27:56.97:0,57,652	0/0:15,0:15:29.93:0,30,374	0/1:16,8:17:41.27:144,0,41	0/0:23,0:22:62.02:0,62,696	0/0:26,0:24:63.15:0,63,804	0/0:17,0:17:35.57:0,36,435	0/0:23,0:23:57.66:0,58,785	0/0:13,0:13:36.09:0,36,481	0/0:13,0:13:27.01:0,27,316	0/0:21,0:20:42.07:0,42,513	0/0:12,0:10:24.01:0,24,279	0/0:30,0:28:39.08:0,39,519	0/0:23,0:23:41.04:0,41,481	0/0:26,0:25:65.29:0,65,807	0/0:27,0:25:56.30:0,56,756	0/0:12,0:12:30.07:0,30,383	0/0:13,0:13:39.09:0,39,505	0/0:12,0:11:30.07:0,30,397	0/0:26,0:24:72.09:0,72,879	0/0:24,0:23:44.92:0,45,559	0/0:28,0:28:83.91:0,84,1021	0/0:21,0:21:33.05:0,33,410	0/0:13,0:13:23.89:0,24,267
chr10	65130104	.	AAAT	A	253.39	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=4.978;DP=677;FS=0.835;HRun=0;HaplotypeScore=145.7975;InbreedingCoeff=0.6424;MQ=65.61;MQ0=16;MQRankSum=-5.598;QD=5.39;ReadPosRankSum=-2.223;VQSLOD=2.6547;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:43,1:44:44.82:0,45,1630	0/0:15,0:15:36.10:0,36,715	0/0:65,0:33:37.46:0,37,843	0/0:50,0:17:34.78:0,35,518	0/0:25,0:25:72.21:0,72,1424	0/0:27,0:27:44.63:0,45,825	0/0:17,0:17:32.96:0,33,650	1/1:18,5:16:30.21:262,30,0	0/1:24,0:22:97.70:98,0,947	0/0:30,0:29:55.71:0,56,994	0/0:16,0:16:33.07:0,33,583	0/0:22,0:22:60.18:0,60,1199	0/0:12,0:12:33.08:0,33,623	0/0:12,0:12:21.06:0,21,417	0/0:17,0:16:33.06:0,33,630	0/0:15,0:12:30.02:0,30,538	0/0:30,0:30:51.07:0,51,898	0/0:23,0:23:45.07:0,45,834	0/0:27,0:27:75.18:0,75,1307	0/0:23,0:21:47.97:0,48,1004	0/0:14,0:14:36.12:0,36,693	0/0:15,0:15:45.13:0,45,791	0/0:13,0:12:33.06:0,33,519	0/0:25,0:23:69.07:0,69,1355	0/0:25,0:24:48.13:0,48,881	0/0:30,0:30:77.01:0,77,1431	0/0:25,0:25:45.15:0,45,889	0/0:13,0:13:20.81:0,21,387
chr10	65130509	.	AAAAAAAACG	A	530.93	PASS	AB=0.691;AC=1;AF=0.018;AN=56;BaseQRankSum=6.659;DP=683;FS=3.335;HRun=0;HaplotypeScore=159.3394;InbreedingCoeff=-0.0232;MQ=56.56;MQ0=9;MQRankSum=-4.753;QD=6.99;ReadPosRankSum=2.573;VQSLOD=2.7233;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:55:99:0,153,3821	0/0:12,0:11:33.11:0,33,971	0/0:30,0:7:11.87:0,12,102	0/0:11,0:3:5.85:0,6,109	0/0:20,0:20:48.11:0,48,1159	0/0:24,0:24:60.20:0,60,1768	0/0:22,0:22:61:0,61,1402	0/1:42,34:66:99:605,0,988	0/0:30,0:29:65.89:0,66,1228	0/0:29,0:28:78.46:0,78,2059	0/0:11,0:11:33.08:0,33,785	0/0:15,0:15:36.12:0,36,945	0/0:24,0:24:69.20:0,69,1682	0/0:22,0:21:57.15:0,57,1783	0/0:24,0:22:66.19:0,66,1553	0/0:23,0:22:57.13:0,57,1395	0/0:31,0:31:81.01:0,81,2346	0/0:23,0:23:63.21:0,63,1910	0/0:20,0:16:48.16:0,48,1044	0/0:23,0:21:55.71:0,56,1448	0/0:16,0:16:30.07:0,30,582	0/0:13,0:13:39.11:0,39,957	0/0:20,0:19:48.19:0,48,930	0/0:25,0:25:59.67:0,60,1849	0/0:20,0:19:34.92:0,35,713	0/0:27,0:26:68.67:0,69,1807	0/0:23,0:22:58.10:0,58,1483	0/0:10,0:10:27.04:0,27,482
chr10	65131123	.	AGAAG	A	961.32	PASS	AB=0.818;AC=9;AF=0.161;AN=56;BaseQRankSum=10.217;DP=921;FS=7.980;HRun=0;HaplotypeScore=124.6543;InbreedingCoeff=-0.1970;MQ=51.49;MQ0=48;MQRankSum=-5.696;QD=2.77;ReadPosRankSum=-2.598;VQSLOD=1.3927;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:45,11:44:99:0,111,2744	0/0:19,0:18:48.14:0,48,1143	0/0:32,0:9:21.07:0,21,526	0/0:26,0:13:7.80:0,8,601	0/0:30,0:30:78.23:0,78,1803	0/1:20,12:25:99:195,0,1324	0/0:23,5:23:48.15:0,48,1155	0/1:66,16:66:99:294,0,2965	0/0:38,4:30:18.14:0,18,1664	0/0:31,8:31:27.29:0,27,1823	0/0:21,1:19:41.05:0,41,1072	0/1:31,9:32:26.49:26,0,1814	0/0:28,0:27:78.27:0,78,2012	0/1:29,6:25:84.17:84,0,1619	0/1:30,11:32:23.61:24,0,1705	0/0:21,7:20:48.14:0,48,1142	0/0:27,6:22:12.29:0,12,1485	0/1:22,3:20:50.62:51,0,1253	0/0:22,0:20:54.17:0,54,1292	0/0:36,0:34:99:0,99,2346	0/0:22,0:21:60.18:0,60,1497	0/0:37,1:36:99:0,105,2569	0/0:24,0:22:60.17:0,60,1450	0/0:23,0:22:42.13:0,42,1004	0/0:24,2:24:66.20:0,66,1608	0/1:33,7:35:99:108,0,1905	0/1:29,13:34:99:290,0,1546	0/1:8,2:9:29.78:30,0,477
chr10	65131303	.	AAAAC	A	994.19	PASS	AB=0.846;AC=11;AF=0.196;AN=56;BaseQRankSum=10.080;DP=1014;FS=24.072;HRun=0;HaplotypeScore=151.8757;InbreedingCoeff=-0.2526;MQ=49.75;MQ0=33;MQRankSum=-8.743;QD=1.80;ReadPosRankSum=-4.707;VQSLOD=-0.6832;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:46:99:0,114,2876	0/1:12,6:15:65.25:65,0,733	0/0:25,0:5:15.05:0,15,371	0/0:25,0:3:9.03:0,9,229	0/0:15,0:15:39.13:0,39,951	0/0:24,2:24:20.16:0,20,1692	0/1:33,5:34:72:72,0,1750	0/1:160,36:135:99:652,0,4571	0/1:51,13:58:89.29:89,0,2856	0/0:28,0:27:66.23:0,66,1622	0/1:15,7:17:20.93:21,0,1064	0/1:29,7:32:92.96:93,0,1727	0/0:27,0:27:72.25:0,72,1810	0/1:31,4:34:62.94:63,0,2035	0/1:37,3:39:16.87:17,0,1969	0/0:31,2:31:72.25:0,72,1779	0/0:30,4:31:43.51:0,44,1863	0/0:29,2:31:23.12:0,23,1776	0/1:29,4:29:13.89:14,0,1412	0/1:15,3:16:13.04:13,0,875	0/1:41,11:50:41.48:41,0,2534	0/0:26,15:26:75.24:0,75,1818	0/0:12,0:12:24.08:0,24,610	0/0:33,0:33:90.31:0,90,2257	0/0:19,2:20:5.03:0,5,1294	0/0:25,5:23:69.24:0,69,1705	0/0:22,3:22:57.20:0,57,1442	0/0:8,1:7:21.07:0,21,533
chr10	65132899	.	T	TC	1163.11	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.814;DP=657;FS=22.575;HRun=1;HaplotypeScore=79.5338;InbreedingCoeff=0.9993;MQ=83.33;MQ0=0;MQRankSum=-2.011;QD=37.52;ReadPosRankSum=-3.648;VQSLOD=1.0923;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:27:84.27:0,84,1091	0/0:13,0:13:36.12:0,36,467	0/0:26,0:26:63.67:0,64,804	0/0:26,0:25:63.13:0,63,746	0/0:15,0:15:42.14:0,42,545	0/0:18,0:18:51.17:0,51,662	0/0:22,0:22:66.21:0,66,857	1/1:4,27:31:84.28:1258,84,0	0/0:26,0:26:78.25:0,78,1012	0/0:24,0:24:72.20:0,72,916	0/0:14,0:14:39.13:0,39,506	0/0:22,0:22:63.20:0,63,818	0/0:22,0:22:66.21:0,66,857	0/0:33,0:33:96.31:0,96,1244	0/0:27,0:27:78.25:0,78,1013	0/0:30,0:30:90.29:0,90,1169	0/0:32,0:32:90.28:0,90,1154	0/0:28,0:28:84.27:0,84,1086	0/0:18,0:18:48.14:0,48,597	0/0:15,0:15:36.12:0,36,468	0/0:38,0:38:99:0,108,1402	0/0:19,0:19:57.19:0,57,739	0/0:16,0:16:42.14:0,42,545	0/0:33,0:33:99:0,99,1269	0/0:14,0:14:42.12:0,42,529	0/0:31,0:31:93.25:0,93,1163	0/0:25,0:25:72.22:0,72,917	0/0:11,0:11:33.11:0,33,428
chr10	65133164	.	G	GA	503.75	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.355;DP=532;FS=14.476;HRun=0;HaplotypeScore=57.1580;InbreedingCoeff=0.9678;MQ=78.56;MQ0=0;MQRankSum=-3.578;QD=31.48;ReadPosRankSum=-2.799;VQSLOD=1.7237;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:81.22:0,81,1064	0/0:6,0:6:15.04:0,15,193	0/0:16,0:16:35.46:0,35,434	0/0:21,0:20:21.56:0,22,530	0/0:11,0:11:33.10:0,33,444	0/0:14,0:14:42.13:0,42,567	0/0:39,0:39:99:0,114,1490	1/1:1,15:16:42.11:599,42,0	0/0:25,0:25:75.21:0,75,997	0/0:17,0:17:51.11:0,51,671	0/0:7,0:7:21.07:0,21,289	0/0:25,0:25:72.15:0,72,946	0/0:16,0:16:45.13:0,45,597	0/0:20,0:20:57.19:0,57,796	0/0:28,0:28:81.26:0,81,1115	0/0:17,0:17:51.16:0,51,697	0/0:34,0:34:99:0,102,1328	0/0:25,0:25:75.22:0,75,1009	0/0:13,0:13:36.11:0,36,487	0/0:7,0:7:18.06:0,18,251	0/0:37,0:37:99:0,108,1395	0/0:16,0:16:42.12:0,42,553	0/0:11,0:11:33.09:0,33,435	0/0:30,0:30:90.24:0,90,1204	0/0:10,0:10:30.10:0,30,418	0/0:20,0:20:60.17:0,60,794	0/0:12,0:12:36.09:0,36,468	0/0:11,0:11:33.08:0,33,427
chr10	65133408	.	T	TG	1237.33	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-2.531;DP=646;FS=36.062;HRun=4;HaplotypeScore=60.6430;InbreedingCoeff=0.9841;MQ=79.60;MQ0=0;MQRankSum=-3.123;QD=33.44;ReadPosRankSum=-3.364;VQSLOD=0.5204;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,99,1123	0/0:5,0:5:15.04:0,15,170	0/0:21,0:21:48.60:0,49,536	0/0:27,0:27:66.62:0,67,728	0/0:22,0:22:63.18:0,63,715	0/0:33,0:33:81.23:0,81,919	0/0:26,0:26:72.20:0,72,815	1/1:3,34:37:99:1332,99,0	0/0:20,0:20:60.16:0,60,669	0/0:17,0:17:48.10:0,48,530	0/0:17,0:17:51.15:0,51,579	0/0:20,0:20:57.16:0,57,647	0/0:11,0:11:33.09:0,33,373	0/0:26,0:26:69.16:0,69,762	0/0:28,0:28:81.22:0,81,909	0/0:19,0:19:57.15:0,57,637	0/0:30,0:30:87.21:0,87,964	0/0:28,0:28:69.12:0,69,746	0/0:25,0:25:75.19:0,75,833	0/0:25,0:25:60.17:0,60,680	0/0:33,0:33:96.27:0,96,1089	0/0:15,0:15:42.12:0,42,476	0/0:15,0:15:45.13:0,45,510	0/0:28,0:27:84.24:0,84,952	0/0:18,0:18:45.13:0,45,510	0/0:25,0:25:72.19:0,72,806	0/0:20,0:20:57.16:0,57,646	0/0:19,0:19:54.15:0,54,613
chr10	65133506	.	GAAGTT	G	1135.73	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.663;DP=646;FS=25.007;HRun=0;HaplotypeScore=115.5420;InbreedingCoeff=0.9973;MQ=81.62;MQ0=0;MQRankSum=-5.715;QD=36.64;ReadPosRankSum=-2.404;VQSLOD=1.3202;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,114,3411	0/0:10,0:10:30.10:0,30,905	0/0:22,0:22:57.20:0,57,1511	0/0:27,0:27:66.20:0,66,1826	0/0:23,0:23:66.23:0,66,2016	0/0:28,0:28:84.27:0,84,2497	0/0:25,0:25:75.26:0,75,2266	1/1:8,23:31:63.19:1231,63,0	0/0:19,0:19:51.18:0,51,1540	0/0:22,0:22:63.21:0,63,1851	0/0:14,0:14:42.14:0,42,1278	0/0:16,0:16:48.16:0,48,1384	0/0:18,0:18:54.19:0,54,1631	0/0:24,0:24:60.21:0,60,1804	0/0:27,0:27:78.27:0,78,2278	0/0:22,0:22:63.22:0,63,1934	0/0:35,0:35:99:0,99,3039	0/0:21,0:21:51.15:0,51,1408	0/0:21,0:21:60.21:0,60,1680	0/0:17,0:17:39.13:0,39,1157	0/0:40,0:40:99:0,114,3309	0/0:18,0:18:54.19:0,54,1569	0/0:9,0:9:24.07:0,24,670	0/0:25,0:25:69.24:0,69,2081	0/0:15,0:15:42.14:0,42,1281	0/0:31,0:31:90.29:0,90,2621	0/0:26,0:26:63.20:0,63,1824	0/0:21,0:21:54.19:0,54,1641
chr10	65134663	.	GTCTC	G	71.72	PASS	AB=0.900;AC=8;AF=0.190;AN=42;BaseQRankSum=1.872;DP=713;FS=3.885;HRun=0;HaplotypeScore=118.0434;InbreedingCoeff=0.2982;MQ=54.79;MQ0=16;MQRankSum=-1.648;QD=0.63;ReadPosRankSum=1.354;VQSLOD=1.7111;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:4.73:0,5,46	./.	./.	./.	0/0:24,0:24:0:0,0,0	0/0:18,0:18:5.84:0,6,35	./.	0/0:40,0:38:9.05:0,9,59	0/0:24,0:22:8.71:0,9,146	0/0:35,0:34:6:0,6,65	./.	1/1:21,0:21:3:28,3,0	0/0:19,0:20:8.76:0,9,99	1/1:14,1:15:3.01:46,3,0	0/0:26,0:24:12.04:0,12,243	0/0:25,0:22:6.48:0,6,95	0/0:38,0:35:39.11:0,39,651	0/1:18,4:22:73.90:74,0,162	0/0:22,0:20:7.84:0,8,109	1/1:14,0:13:0.89:2,1,0	0/0:46,0:43:12:0,12,218	./.	0/0:16,0:15:6.02:0,6,107	0/1:39,1:41:27.91:28,0,518	./.	0/0:33,0:28:24.07:0,24,368	0/0:32,0:32:11.83:0,12,166	0/0:7,0:5:0:0,0,0
chr10	65135040	.	G	GAA	589.40	PASS	AB=0.944;AC=3;AF=0.054;AN=56;BaseQRankSum=-2.086;DP=633;FS=4.167;HRun=10;HaplotypeScore=80.8055;InbreedingCoeff=0.6393;MQ=73.42;MQ0=0;MQRankSum=-1.519;QD=12.54;ReadPosRankSum=0.810;VQSLOD=1.8217;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,100,981	0/0:5,0:5:5.99:0,6,61	0/1:16,0:17:3.39:3,0,293	0/0:6,0:8:7.94:0,8,76	0/0:21,0:22:41.30:0,41,478	0/0:26,0:26:57.08:0,57,579	0/0:22,0:22:59.83:0,60,603	0/0:3,0:21:49.39:0,49,214	1/1:3,25:30:50.14:683,50,0	0/0:18,0:18:45.01:0,45,446	0/0:10,0:10:27.04:0,27,275	0/0:35,0:35:93.16:0,93,939	0/0:23,0:23:60.06:0,60,597	0/0:29,0:29:71.99:0,72,711	0/0:23,0:23:63.09:0,63,624	0/0:23,0:23:54.04:0,54,543	0/0:47,0:47:99:0,120,1211	0/0:24,0:24:51.03:0,51,518	0/0:21,0:21:42.02:0,42,421	0/0:12,0:12:24.03:0,24,244	0/0:37,0:38:95.80:0,96,923	0/0:16,0:18:29.75:0,30,357	0/0:16,0:17:32.77:0,33,387	0/0:31,0:31:78.09:0,78,784	0/0:18,0:18:33.01:0,33,330	0/0:27,0:27:63.06:0,63,635	0/0:15,0:15:36.05:0,36,366	0/0:12,0:12:29.98:0,30,295
chr10	65136762	.	T	TA	4603.77	PASS	AB=0.679;AC=42;AF=0.750;AN=56;BaseQRankSum=-4.965;DP=468;FS=3.389;HRun=13;HaplotypeScore=58.2650;InbreedingCoeff=0.5359;MQ=71.75;MQ0=0;MQRankSum=-3.368;QD=11.37;ReadPosRankSum=0.124;VQSLOD=4.4540;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,20:26:51.37:461,51,0	0/1:4,5:10:5.73:83,0,6	0/0:10,0:10:7.11:0,7,58	0/0:10,0:9:12.76:0,13,73	0/0:16,1:19:36.62:0,37,235	1/1:8,17:31:3.58:384,4,0	1/1:2,14:16:6.45:202,6,0	1/1:12,23:37:48.02:533,48,0	1/1:5,10:15:9.01:84,9,0	1/1:5,12:18:26.85:231,27,0	1/1:6,8:14:15.71:107,16,0	1/1:4,5:10:11.85:98,12,0	0/0:15,0:15:26.64:0,27,183	1/1:3,4:8:10.08:70,10,0	1/1:8,10:20:3.58:145,4,0	1/1:4,12:16:29.82:275,30,0	1/1:7,13:21:9.04:189,9,0	0/1:6,11:18:20.26:106,0,20	1/1:7,7:18:8.19:192,8,0	0/1:11,11:25:3.73:225,0,4	1/1:7,9:16:9.01:84,9,0	1/1:1,6:7:12.01:111,12,0	0/0:8,0:8:17.79:0,18,123	0/1:8,2:10:3.48:3,0,99	1/1:6,13:19:4.69:178,5,0	1/1:7,15:22:25.30:349,25,0	1/1:4,14:19:32.80:282,33,0	1/1:0,8:8:23.95:212,24,0
chr10	65137031	.	A	AAGAG	1176.84	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-5.161;DP=608;FS=2.373;HRun=0;HaplotypeScore=98.2846;InbreedingCoeff=0.9943;MQ=61.32;MQ0=0;MQRankSum=2.406;QD=33.62;ReadPosRankSum=-4.925;VQSLOD=2.6874;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,99,1728	0/0:12,0:12:33.07:0,33,550	0/0:21,0:16:32.19:0,32,416	0/0:17,0:11:20.08:0,20,222	0/0:21,0:21:59.91:0,60,1012	0/0:16,0:16:48.15:0,48,890	0/0:23,0:23:69.14:0,69,1125	1/1:5,26:35:87.42:1272,87,0	0/0:16,0:16:48.14:0,48,857	0/0:28,0:28:84.27:0,84,1551	0/0:17,0:17:51.10:0,51,797	0/0:21,0:21:63.15:0,63,1064	0/0:16,0:16:45.13:0,45,821	0/0:19,0:19:57.17:0,57,1037	0/0:22,0:22:66.18:0,66,1144	0/0:16,0:16:48.13:0,48,820	0/0:27,0:27:70.40:0,70,1203	0/0:17,0:17:48.04:0,48,790	0/0:17,0:17:51.07:0,51,712	0/0:30,0:30:84.23:0,84,1464	0/0:22,0:22:66.21:0,66,1222	0/0:16,0:15:45.05:0,45,763	0/0:17,0:17:51.13:0,51,850	0/0:28,0:28:77.91:0,78,1289	0/0:21,0:20:63.14:0,63,1034	0/0:33,0:33:96.29:0,96,1717	0/0:20,0:20:57.17:0,57,1048	0/0:23,0:23:69.11:0,69,1042
chr10	65137666	.	T	TC	812.51	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-0.078;DP=575;FS=7.203;HRun=0;HaplotypeScore=56.8795;InbreedingCoeff=0.9934;MQ=87.53;MQ0=0;MQRankSum=-1.236;QD=38.69;ReadPosRankSum=-2.557;VQSLOD=2.6034;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,132,1797	0/0:19,0:19:51.17:0,51,704	0/0:21,0:21:42.76:0,43,699	0/0:19,0:19:44.33:0,44,654	0/0:16,0:16:39.06:0,39,521	0/0:18,0:18:51.17:0,51,712	0/0:18,0:18:54.17:0,54,739	1/1:1,20:21:57.19:907,57,0	0/0:16,0:16:45.13:0,45,611	0/0:23,0:23:66.21:0,66,896	0/0:12,0:12:36.10:0,36,471	0/0:21,0:21:63.14:0,63,845	0/0:15,0:15:45.14:0,45,609	0/0:14,0:14:39.13:0,39,543	0/0:22,0:21:60.20:0,60,839	0/0:14,0:14:42.13:0,42,570	0/0:30,0:30:90.28:0,90,1237	0/0:23,0:23:65.96:0,66,809	0/0:24,0:24:72.24:0,72,1006	0/0:18,0:18:54.17:0,54,740	0/0:42,0:42:99:0,120,1653	0/0:8,0:8:21.06:0,21,277	0/0:9,0:9:24.03:0,24,312	0/0:28,0:28:81.25:0,81,1113	0/0:14,0:14:39.13:0,39,544	0/0:29,0:29:81.26:0,81,1116	0/0:13,0:13:36.06:0,36,463	0/0:20,0:20:57.19:0,57,795
chr10	65137822	.	T	TTTTGC	909.16	PASS	AB=0.977;AC=3;AF=0.054;AN=56;BaseQRankSum=3.700;DP=453;FS=15.926;HRun=0;HaplotypeScore=106.8444;InbreedingCoeff=0.5210;MQ=61.58;MQ0=23;MQRankSum=-3.262;QD=15.15;ReadPosRankSum=-3.292;VQSLOD=1.3613;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:24:63.21:0,63,1198	0/0:6,0:6:18.06:0,18,349	0/0:45,0:9:20.63:0,21,264	0/1:41,0:12:22.41:22,0,83	0/0:18,0:18:54.17:0,54,982	0/0:15,0:15:45.15:0,45,819	0/0:8,0:8:18.03:0,18,321	1/1:7,9:18:39.12:992,39,0	0/0:9,0:9:21.07:0,21,412	0/0:21,0:21:60.20:0,60,1104	0/0:16,0:15:36.11:0,36,648	0/0:10,0:10:27.09:0,27,539	0/0:7,0:6:18.06:0,18,360	0/0:10,0:9:27.09:0,27,500	0/0:14,0:14:27.09:0,27,521	0/0:6,0:6:18.06:0,18,316	0/0:32,0:30:67.33:0,67,1378	0/0:18,0:16:36.11:0,36,669	0/0:16,0:14:30.10:0,30,601	0/0:12,0:11:30.10:0,30,550	0/0:4,0:2:3:0,3,28	0/0:2,0:2:6.02:0,6,120	0/0:13,0:12:31.92:0,32,583	0/0:7,0:7:21.07:0,21,408	0/0:27,0:27:78.23:0,78,1438	0/0:22,0:22:57.18:0,57,1082	0/0:16,0:16:48.16:0,48,920	0/0:12,0:10:27.04:0,27,465
chr10	65138297	.	AT	A	541.97	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.327;DP=687;FS=5.344;HRun=8;HaplotypeScore=67.6723;InbreedingCoeff=0.9987;MQ=80.85;MQ0=0;MQRankSum=-1.539;QD=19.36;ReadPosRankSum=-2.990;VQSLOD=2.7224;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:47:99:0,125,1543	0/0:11,0:11:27.08:0,27,326	0/0:22,0:22:53.35:0,53,589	0/0:16,0:16:39.08:0,39,436	0/0:25,1:26:40.20:0,40,715	0/0:30,0:30:87.27:0,87,1050	0/0:26,0:26:72.21:0,72,859	1/1:5,23:28:66.10:637,66,0	0/0:35,0:35:90.26:0,90,1075	0/0:31,0:31:84.23:0,84,987	0/0:21,0:21:45.14:0,45,542	0/0:23,0:23:66.20:0,66,797	0/0:27,0:27:78.21:0,78,919	0/0:19,0:19:48.13:0,48,569	0/0:36,0:36:99:0,105,1232	0/0:24,0:24:69.20:0,69,824	0/0:25,0:25:75.23:0,75,905	0/0:15,0:15:38.06:0,38,408	0/0:29,0:29:75.23:0,75,905	0/0:28,0:28:78.23:0,78,931	0/0:15,0:15:42.13:0,42,507	0/0:24,0:24:69.21:0,69,834	0/0:25,0:25:48.11:0,48,563	0/0:19,0:19:54.15:0,54,640	0/0:19,0:19:45.13:0,45,533	0/0:23,0:23:66.19:0,66,788	0/0:25,0:25:69.20:0,69,822	0/0:18,0:18:54.17:0,54,652
chr10	65139272	.	T	TA	523.51	PASS	AB=0.861;AC=6;AF=0.107;AN=56;BaseQRankSum=-3.292;DP=535;FS=6.042;HRun=13;HaplotypeScore=69.5166;InbreedingCoeff=0.5800;MQ=62.26;MQ0=2;MQRankSum=-0.904;QD=8.87;ReadPosRankSum=-3.839;VQSLOD=1.8016;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:39:56.13:0,56,386	0/0:13,0:13:26.65:0,27,178	0/1:8,0:6:24.88:29,0,25	0/1:6,0:3:0.01:0,0,0	0/0:21,0:24:39.35:0,39,254	0/0:22,0:23:49.62:0,50,335	0/0:13,0:15:29.82:0,30,182	1/1:10,18:27:48.72:399,49,0	1/1:2,11:13:24.03:223,24,0	0/0:24,0:24:53.47:0,53,369	0/0:20,2:23:32.45:0,32,221	0/0:16,0:16:28.69:0,29,191	0/0:13,0:13:0.35:0,0,120	0/0:13,0:13:17.78:0,18,123	0/0:19,0:19:7.34:0,7,142	0/0:20,0:20:41.57:0,42,288	0/0:24,0:25:34.57:0,35,229	0/0:23,0:23:40.60:0,41,270	0/0:16,2:18:0.78:0,1,141	0/0:16,0:16:26.65:0,27,183	0/0:24,0:24:44.36:0,44,305	0/0:18,0:18:8.29:0,8,147	0/0:9,0:10:16.88:0,17,109	0/0:16,0:16:23.43:0,23,153	0/0:19,3:22:10.74:0,11,217	0/0:23,0:23:49.96:0,50,329	0/0:17,0:17:29.66:0,30,202	0/0:20,0:20:38.62:0,39,266
chr10	65139301	.	A	AGT	850.64	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-2.604;DP=522;FS=3.017;HRun=0;HaplotypeScore=75.1690;InbreedingCoeff=0.9875;MQ=74.50;MQ0=0;MQRankSum=0.253;QD=31.51;ReadPosRankSum=0.589;VQSLOD=5.3388;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:69.02:0,69,840	0/0:12,0:12:30.10:0,30,380	0/0:14,0:14:26.96:0,27,297	0/0:16,0:14:22.91:0,23,292	1/1:6,18:27:25.03:944,25,0	0/0:20,0:20:45.13:0,45,559	0/0:15,0:15:30.10:0,30,381	0/0:29,0:29:69.21:0,69,865	0/0:11,0:11:27.07:0,27,329	0/0:23,0:23:60.19:0,60,763	0/0:22,0:22:54.17:0,54,686	0/0:12,0:12:33.11:0,33,419	0/0:15,0:15:24.08:0,24,303	0/0:14,0:14:30.07:0,30,354	0/0:16,0:16:27.07:0,27,329	0/0:23,0:23:57.18:0,57,724	0/0:19,0:19:51.16:0,51,647	0/0:20,0:20:39.10:0,39,480	0/0:28,0:27:66.17:0,66,811	0/0:12,0:12:36.12:0,36,457	0/0:27,0:27:78.25:0,78,992	0/0:10,0:10:27.09:0,27,344	0/0:13,0:13:39.12:0,39,496	0/0:19,0:19:42.08:0,42,490	0/0:19,0:19:51.16:0,51,649	0/0:19,0:19:51.16:0,51,648	0/0:14,0:14:36.10:0,36,444	0/0:20,0:19:54.16:0,54,672
chr10	65140310	.	TG	T	746.16	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.881;DP=682;FS=6.560;HRun=5;HaplotypeScore=72.3595;InbreedingCoeff=0.9976;MQ=86.53;MQ0=0;MQRankSum=-4.356;QD=24.87;ReadPosRankSum=-2.774;VQSLOD=1.7505;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,108,1386	0/0:11,0:11:24.08:0,24,328	0/0:23,0:24:61.78:0,62,770	0/0:25,0:25:71.42:0,71,911	0/0:24,0:24:72.22:0,72,964	0/0:13,0:13:36.12:0,36,492	0/0:23,0:23:63.19:0,63,831	1/1:5,25:30:75.20:841,75,0	0/0:29,0:29:84.22:0,84,1111	0/0:28,0:28:78.25:0,78,1046	0/0:13,0:13:36.11:0,36,477	0/0:29,0:29:81.27:0,81,1102	0/0:30,0:30:81.27:0,81,1108	0/0:23,0:23:66.20:0,66,882	0/0:28,0:28:84.27:0,84,1135	0/0:27,0:27:75.23:0,75,996	0/0:29,0:29:84.24:0,84,1106	0/0:15,0:15:45.15:0,45,616	0/0:20,0:19:54.18:0,54,733	0/0:26,0:26:72.22:0,72,953	0/0:45,0:45:99:0,135,1800	0/0:32,0:32:81.24:0,81,1074	0/0:12,0:12:36.12:0,36,492	0/0:27,0:27:81.27:0,81,1105	0/0:16,0:16:48.16:0,48,653	0/0:21,0:21:54.18:0,54,738	0/0:19,0:19:57.19:0,57,779	0/0:25,0:25:75.25:0,75,1025
chr10	65140443	.	CCTAGGAATGAGTCTATG	C	943.90	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.029;DP=625;FS=2.862;HRun=0;HaplotypeScore=276.9956;InbreedingCoeff=0.9985;MQ=89.91;MQ0=1;MQRankSum=-1.967;QD=94.39;ReadPosRankSum=-1.762;VQSLOD=3.0504;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,157,12277	0/0:12,0:12:36.12:0,36,2517	0/0:29,0:29:87.26:0,87,5168	0/0:25,0:25:65.25:0,65,4043	0/0:28,0:28:84.29:0,84,6159	0/0:17,0:17:51.17:0,51,3980	0/0:26,0:26:78.27:0,78,5870	1/1:0,10:10:27.08:1038,27,0	0/0:22,0:22:66.23:0,66,5179	0/0:19,0:19:57.20:0,57,4384	0/0:15,0:15:45.15:0,45,3276	0/0:31,0:31:93.31:0,93,6974	0/0:23,0:23:69.24:0,69,5787	0/0:18,0:18:54.19:0,54,4184	0/0:29,0:29:87.30:0,87,6916	0/0:27,0:27:81.28:0,81,6498	0/0:23,0:22:66.20:0,66,4855	0/0:18,0:18:54.19:0,54,4508	0/0:20,0:20:57.20:0,57,3465	0/0:12,0:12:36.12:0,36,2722	0/0:38,0:38:99:0,114,8058	0/0:13,0:13:39.13:0,39,3125	0/0:24,0:24:72.24:0,72,5539	0/0:21,0:21:63.22:0,63,4972	0/0:13,0:13:39.13:0,39,2902	0/0:18,0:18:54.19:0,54,4023	0/0:30,0:29:90.31:0,90,6411	0/0:12,0:12:36.12:0,36,2705
chr10	65142394	.	GA	G	741.18	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.840;DP=637;FS=9.992;HRun=5;HaplotypeScore=58.8797;InbreedingCoeff=0.9992;MQ=81.82;MQ0=0;MQRankSum=0.277;QD=23.16;ReadPosRankSum=-3.762;VQSLOD=1.2830;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,126,1684	0/0:10,0:10:30.10:0,30,410	0/0:14,0:14:36.11:0,36,475	0/0:22,0:22:59.38:0,59,753	0/0:18,0:18:51.16:0,51,681	0/0:28,0:28:84.26:0,84,1120	0/0:22,0:22:63.20:0,63,848	1/1:7,25:32:75.19:836,75,0	0/0:14,0:14:39.10:0,39,533	0/0:26,0:26:78.26:0,78,1063	0/0:15,0:15:45.13:0,45,598	0/0:23,0:23:63.19:0,63,844	0/0:24,0:24:69.23:0,69,944	0/0:23,0:23:66.21:0,66,887	0/0:25,0:25:72.23:0,72,972	0/0:30,0:30:84.28:0,84,1149	0/0:24,0:24:69.23:0,69,943	0/0:25,0:25:72.21:0,72,966	0/0:18,0:18:51.17:0,51,696	0/0:16,0:16:42.14:0,42,574	0/0:39,0:39:99:0,103,1345	0/0:19,0:19:54.18:0,54,732	0/0:15,0:15:45.15:0,45,608	0/0:25,0:25:72.23:0,72,968	0/0:18,0:18:54.18:0,54,739	0/0:31,0:31:90.27:0,90,1200	0/0:25,0:25:69.21:0,69,913	0/0:14,0:14:42.14:0,42,575
chr10	65143103	.	C	CT	945.77	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=8.294;DP=753;FS=1.440;HRun=6;HaplotypeScore=84.9436;InbreedingCoeff=0.9781;MQ=73.11;MQ0=0;MQRankSum=-0.354;QD=25.56;ReadPosRankSum=-4.935;VQSLOD=1.2768;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,117,1187	0/0:14,0:14:36.06:0,36,361	0/0:26,0:23:41.13:0,41,431	0/0:26,0:26:19.20:0,19,471	0/0:39,0:38:99:0,114,1163	0/0:30,0:30:84.19:0,84,857	0/0:26,0:26:72.15:0,72,727	1/1:10,27:36:84.19:1041,84,0	0/0:23,0:23:63.14:0,63,642	0/0:30,0:30:84.18:0,84,849	0/0:26,0:26:72.16:0,72,734	0/0:27,0:27:75.16:0,75,765	0/0:19,0:19:51.11:0,51,520	0/0:19,0:19:54.12:0,54,551	0/0:34,0:34:90.18:0,90,910	0/0:27,0:27:75.16:0,75,765	0/0:32,0:32:67.66:0,68,903	0/0:34,0:34:99:0,99,1003	0/0:19,0:19:48.10:0,48,489	0/0:22,0:22:54.12:0,54,551	0/0:29,0:29:81.18:0,81,826	0/0:15,0:15:33.06:0,33,330	0/0:23,0:23:60.13:0,60,612	0/0:34,0:34:93.20:0,93,949	0/0:34,0:34:87.18:0,87,881	0/0:32,0:32:84.18:0,84,856	0/0:29,0:29:84.17:0,84,849	0/0:5,0:5:15.03:0,15,153
chr10	65143573	.	G	GT	277.96	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=-3.484;DP=280;FS=36.570;HRun=1;HaplotypeScore=72.9845;InbreedingCoeff=0.2858;MQ=34.93;MQ0=0;MQRankSum=-1.298;QD=13.24;ReadPosRankSum=0.782;VQSLOD=0.7602;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:24:33.21:0,33,263	0/0:7,0:7:12.01:0,12,139	0/0:1,0:1:3.01:0,3,40	0/0:5,0:5:5.48:0,5,25	0/1:11,0:11:4.88:5,0,56	0/0:9,0:9:11.89:0,12,99	0/0:17,0:17:20.81:0,21,160	1/1:3,7:10:24.08:369,24,0	0/0:4,0:4:5.93:0,6,40	0/0:11,0:11:29.70:0,30,382	0/0:6,0:6:5.63:0,6,45	0/0:16,0:16:14.93:0,15,144	0/0:10,0:10:11.97:0,12,121	0/0:5,0:5:2.95:0,3,20	0/0:9,0:9:14.85:0,15,120	0/0:3,0:3:2.95:0,3,20	0/0:10,0:10:14.92:0,15,131	0/0:12,0:12:36.12:0,36,472	0/0:11,0:11:27.08:0,27,359	0/0:11,0:11:8.69:0,9,105	0/0:12,0:12:5.68:0,6,65	0/0:12,0:12:11.90:0,12,94	0/0:4,0:4:5.96:0,6,44	0/0:10,0:10:8.57:0,9,59	0/0:14,0:14:8.92:0,9,80	0/0:9,0:9:24.06:0,24,321	0/0:22,0:22:26.62:0,27,249	0/0:4,0:4:9.02:0,9,120
chr10	65145174	.	G	GAC	1460.71	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-1.669;DP=691;FS=3.472;HRun=0;HaplotypeScore=116.3851;InbreedingCoeff=0.9932;MQ=89.06;MQ0=0;MQRankSum=-3.273;QD=47.12;ReadPosRankSum=-3.582;VQSLOD=3.2841;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:96.29:0,96,1422	0/0:7,0:7:21.07:0,21,322	0/0:19,0:19:48.13:0,48,672	0/0:34,0:34:80.95:0,81,1100	0/0:29,0:29:84.29:0,84,1279	0/0:26,0:26:78.25:0,78,1163	0/0:33,0:33:99:0,99,1468	1/1:8,22:31:85.87:1556,86,0	0/0:15,0:15:36.12:0,36,549	0/0:16,0:16:48.16:0,48,734	0/0:16,0:16:48.16:0,48,732	0/0:35,0:35:99:0,102,1536	0/0:25,0:26:69.18:0,69,1002	0/0:21,0:21:57.09:0,57,780	0/0:28,0:28:75.25:0,75,1146	0/0:27,0:27:81.28:0,81,1240	0/0:37,0:37:99:0,108,1606	0/0:24,0:24:69.17:0,69,999	0/0:23,0:23:69.19:0,69,1028	0/0:10,0:10:30.10:0,30,450	0/0:49,0:49:99:0,144,2183	0/0:26,0:26:75.24:0,75,1126	0/0:17,0:17:48.15:0,48,714	0/0:30,0:30:78.25:0,78,1172	0/0:13,0:13:36.12:0,36,551	0/0:26,0:26:75.25:0,75,1147	0/0:29,0:29:84.27:0,84,1262	0/0:8,0:8:24.08:0,24,367
chr10	65146408	.	ACTT	A	1054.47	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.446;DP=661;FS=8.660;HRun=0;HaplotypeScore=90.5078;InbreedingCoeff=0.9686;MQ=75.44;MQ0=0;MQRankSum=-4.603;QD=40.56;ReadPosRankSum=1.679;VQSLOD=4.7546;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:43:99:0,126,2814	0/0:4,0:4:12.04:0,12,272	0/0:14,0:14:33.11:0,33,707	0/0:12,0:12:33.08:0,33,622	0/0:25,0:25:75.24:0,75,1653	0/0:18,0:18:54.19:0,54,1224	0/0:36,0:36:99:0,108,2447	0/0:25,0:25:72.22:0,72,1568	1/1:1,25:26:69.24:1149,69,0	0/0:25,0:25:75.26:0,75,1696	0/0:20,0:20:60.21:0,60,1340	0/0:32,0:32:96.33:0,96,2176	0/0:23,0:23:66.23:0,66,1456	0/0:25,0:25:75.24:0,75,1634	0/0:26,0:26:78.27:0,78,1767	0/0:26,0:26:75.26:0,75,1700	0/0:36,0:36:99:0,99,2241	0/0:18,0:18:51.15:0,51,1111	0/0:14,0:14:39.13:0,39,882	0/0:19,0:19:54.19:0,54,1188	0/0:54,0:54:99:0,160,3558	0/0:21,0:21:60.21:0,60,1360	0/0:11,0:11:33.11:0,33,748	0/0:24,0:24:66.23:0,66,1455	0/0:18,0:18:51.18:0,51,1136	0/0:22,0:22:63.21:0,63,1355	0/0:34,0:34:96.33:0,96,2154	0/0:9,0:9:27.09:0,27,612
chr10	65147123	.	GC	G	1079.14	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=8.421;DP=714;FS=1.513;HRun=1;HaplotypeScore=71.1888;InbreedingCoeff=0.9972;MQ=91.62;MQ0=0;MQRankSum=-2.270;QD=38.54;ReadPosRankSum=-3.513;VQSLOD=2.7940;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:42:99:0,129,2015	0/0:8,0:8:24.08:0,24,383	0/0:37,0:37:99:0,100,1579	0/0:22,0:22:66.17:0,66,928	0/0:26,0:26:75.22:0,75,1192	0/0:23,0:22:69.21:0,69,1056	0/0:27,0:27:78.27:0,78,1246	1/1:0,28:28:84.28:1174,84,0	0/0:31,0:31:87.27:0,87,1336	0/0:22,0:22:63.21:0,63,1008	0/0:10,0:10:30.10:0,30,477	0/0:32,0:32:96.33:0,96,1534	0/0:28,0:28:84.27:0,84,1318	0/0:23,0:23:66.18:0,66,1005	0/0:19,0:19:57.19:0,57,908	0/0:21,0:21:63.20:0,63,980	0/0:27,0:27:81.28:0,81,1295	0/0:40,0:40:99:0,120,1864	0/0:25,0:25:75.23:0,75,1133	0/0:20,0:20:60.19:0,60,936	0/0:50,0:50:99:0,147,2324	0/0:17,0:17:51.17:0,51,815	0/0:17,0:17:51.17:0,51,804	0/0:39,0:39:99:0,117,1757	0/0:17,0:17:51.17:0,51,813	0/0:27,0:27:81.27:0,81,1271	0/0:24,0:24:72.25:0,72,1150	0/0:11,0:11:33.03:0,33,429
chr10	65147820	.	AC	A	147.98	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.239;DP=555;FS=7.228;HRun=1;HaplotypeScore=65.1671;InbreedingCoeff=0.6739;MQ=72.79;MQ0=2;MQRankSum=-1.886;QD=10.57;ReadPosRankSum=-3.250;VQSLOD=0.0845;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:72.24:0,72,1055	0/0:5,0:5:15.05:0,15,224	0/0:32,0:23:7.96:0,8,596	0/0:30,1:23:52.59:0,53,734	0/0:28,0:28:84.21:0,84,1155	0/0:12,0:12:36.11:0,36,517	0/0:18,0:18:54.18:0,54,805	1/1:8,6:13:2.20:225,2,0	0/0:18,0:18:54.18:0,54,797	0/0:20,0:20:60.17:0,60,829	0/0:15,0:15:45.12:0,45,633	0/0:23,0:23:69.22:0,69,1010	0/0:18,0:18:54.18:0,54,800	0/0:22,0:22:63.21:0,63,942	0/0:34,0:34:99:0,99,1400	0/0:19,0:19:57.17:0,57,812	0/0:30,0:30:90.13:0,90,1237	0/0:21,0:21:55.66:0,56,824	0/0:17,0:17:51.04:0,51,732	0/0:23,0:23:69.23:0,69,1029	0/0:25,0:25:75.22:0,75,1076	0/0:12,0:12:36.12:0,36,537	0/0:16,0:16:48.15:0,48,698	0/0:24,0:24:72.24:0,72,1068	0/0:16,0:16:48.15:0,48,699	0/0:15,0:15:45.11:0,45,599	0/0:18,0:18:54.18:0,54,803	0/0:5,0:5:15.03:0,15,203
chr10	65147861	.	AC	A	151.27	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.596;DP=488;FS=1.256;HRun=1;HaplotypeScore=47.5658;InbreedingCoeff=0.9654;MQ=61.92;MQ0=3;MQRankSum=-4.697;QD=8.40;ReadPosRankSum=-1.919;VQSLOD=0.1566;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:69.18:0,69,866	0/0:4,0:4:12.04:0,12,159	0/0:22,0:17:47.94:0,48,567	0/0:14,1:11:30.07:0,30,356	0/0:25,0:25:75.17:0,75,912	0/0:9,0:9:27.09:0,27,358	0/0:14,0:14:42.11:0,42,526	1/1:13,5:16:26.01:245,26,0	0/0:14,0:14:42.14:0,42,554	0/0:18,0:18:54.12:0,54,676	0/0:15,0:15:45.10:0,45,550	0/0:17,0:17:51.14:0,51,646	0/0:17,0:17:51.06:0,51,625	0/0:18,0:18:54.16:0,54,699	0/0:23,0:23:69.16:0,69,835	0/0:13,0:13:39.10:0,39,488	0/0:26,0:26:66.48:0,66,890	0/0:27,0:27:81.16:0,81,1018	0/0:16,0:16:48.09:0,48,588	0/0:24,0:24:72.22:0,72,935	0/0:23,0:23:69.13:0,69,820	0/0:13,0:13:39.08:0,39,483	0/0:16,0:16:48.12:0,48,604	0/0:22,0:22:66.15:0,66,853	0/0:17,0:17:51.14:0,51,647	0/0:17,0:17:51.14:0,51,649	0/0:13,0:13:39.09:0,39,482	0/0:8,0:8:24.08:0,24,318
chr10	65148773	.	GGGGGGGGGGC	G	84.96	PASS	AB=1.000;AC=5;AF=0.096;AN=52;BaseQRankSum=3.830;DP=175;FS=0.000;HRun=0;HaplotypeScore=33.4613;InbreedingCoeff=0.2238;MQ=59.41;MQ0=19;MQRankSum=-0.177;QD=4.72;ReadPosRankSum=2.245;VQSLOD=1.0942;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:9:12.49:0,12,359	0/0:1,0:1:3:0,3,26	0/0:14,0:3:9.02:0,9,152	0/0:8,0:4:8.97:0,9,165	0/0:4,0:3:3.01:0,3,120	0/0:7,0:6:3.01:0,3,63	0/0:12,0:10:21.07:0,21,595	1/1:1,8:8:23.84:173,24,0	0/0:5,0:4:9.02:0,9,192	0/0:4,0:4:9.02:0,9,152	0/0:7,0:7:14.91:0,15,367	0/0:14,0:10:15.04:0,15,423	0/0:1,0:1:3:0,3,26	./.	0/0:5,0:4:8.96:0,9,139	./.	0/0:18,0:15:32.94:0,33,643	0/0:3,0:2:3.01:0,3,127	0/0:3,0:3:3:0,3,28	0/0:3,0:3:6.01:0,6,164	1/1:6,0:5:0.47:1,0,0	0/0:5,0:5:8.11:0,8,133	0/1:3,0:3:8.99:9,0,139	0/0:4,0:4:2.19:0,2,17	0/0:5,0:4:9.03:0,9,316	0/0:4,0:4:6.01:0,6,55	0/0:10,0:7:20.82:0,21,438	0/0:3,0:2:3.01:0,3,124
chr10	65148864	.	GACC	G	985.59	PASS	AB=0.918;AC=39;AF=0.722;AN=54;BaseQRankSum=-1.280;DP=268;FS=9.410;HRun=0;HaplotypeScore=47.1011;InbreedingCoeff=-0.0530;MQ=43.73;MQ0=34;MQRankSum=4.171;QD=4.63;ReadPosRankSum=-0.287;VQSLOD=0.3602;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:19,1:19:6.71:81,7,0	1/1:1,1:2:4.56:33,5,0	0/0:25,0:3:3.01:0,3,34	0/0:27,0:7:8.32:0,8,86	0/1:5,0:5:9.60:13,0,10	0/1:5,2:7:19.05:19,0,26	1/1:11,0:11:16.23:128,16,0	./.	1/1:5,0:8:13.60:84,14,0	0/1:8,1:7:17.88:46,0,18	0/1:5,2:6:1.63:31,0,2	1/1:16,0:16:25.43:169,25,0	0/1:7,0:6:11.24:11,0,38	0/1:4,0:4:2.82:10,0,3	1/1:4,0:3:2.70:28,3,0	1/1:9,2:11:11.78:69,12,0	1/1:17,0:14:18.21:91,18,0	1/1:11,0:11:1.12:29,1,0	0/1:11,0:10:8.02:54,0,8	0/1:4,3:6:2.38:30,0,2	1/1:4,0:4:2.03:5,2,0	1/1:2,0:2:2.22:7,2,0	1/1:4,0:4:0.89:57,1,0	0/1:5,0:4:6.97:7,0,8	1/1:5,0:5:2.13:5,2,0	0/1:13,0:12:3.92:10,0,4	0/1:17,0:16:8.11:74,0,8	1/1:3,0:2:3.01:30,3,0
chr10	65148865	.	ACC	A	1296.01	PASS	AB=0.979;AC=44;AF=0.815;AN=54;BaseQRankSum=-2.034;DP=269;FS=0.000;HRun=2;HaplotypeScore=44.0329;InbreedingCoeff=0.1240;MQ=46.30;MQ0=33;MQRankSum=2.202;QD=5.42;ReadPosRankSum=1.672;VQSLOD=-0.5685;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:17,2:19:16.24:120,16,0	1/1:2,0:2:4.46:20,4,0	0/1:26,0:3:1.42:1,0,28	0/0:28,0:8:9.58:0,10,110	0/1:4,1:5:1.59:15,0,2	0/1:7,0:7:2.12:15,0,2	1/1:7,4:11:17.48:155,17,0	./.	1/1:7,1:8:13.39:64,13,0	0/1:9,0:7:2.66:25,0,3	1/1:7,0:6:7.26:47,7,0	1/1:13,3:16:26.01:196,26,0	0/1:7,0:6:24.46:24,0,24	1/1:4,0:4:7.16:43,7,0	1/1:3,1:3:3.48:48,3,0	1/1:10,2:12:14.79:87,15,0	1/1:15,2:14:19.37:146,19,0	1/1:13,0:11:12.19:63,12,0	0/1:11,0:10:2.60:34,0,3	0/1:7,0:6:0.70:18,0,1	1/1:3,0:3:2.03:5,2,0	1/1:2,0:2:2.22:7,2,0	1/1:3,1:4:10.26:94,10,0	0/1:5,0:4:1.61:33,0,2	1/1:3,2:5:2.13:5,2,0	1/1:10,3:12:4.49:20,4,0	1/1:18,0:16:18.71:98,19,0	1/1:3,0:2:3.01:33,3,0
chr10	65149137	.	AGCTGCT	A	2127.06	PASS	AB=0.827;AC=18;AF=0.750;AN=24;BaseQRankSum=-5.612;DP=421;FS=0.990;HRun=0;HaplotypeScore=84.4657;InbreedingCoeff=0.6112;MQ=62.81;MQ0=16;MQRankSum=-6.652;QD=10.03;ReadPosRankSum=-2.058;VQSLOD=1.6638;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	./.	./.	1/1:21,7:26:9.03:172,9,0	./.	1/1:15,8:23:15.05:298,15,0	./.	./.	0/0:12,0:21:29.47:0,29,188	0/1:6,1:11:41.71:42,0,111	1/1:7,5:12:15.05:298,15,0	1/1:8,7:15:15.05:298,15,0	1/1:11,8:19:15.05:298,15,0	1/1:26,10:36:24.08:476,24,0	1/1:15,4:19:6.02:119,6,0	./.	./.	0/1:27,1:26:0:0,0,0	./.	./.	0/0:17,0:27:29.40:0,29,182	./.	./.	1/1:12,9:20:12.03:238,12,0	./.
chr10	65152692	.	G	GACACAC	90.93	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=0.022;DP=746;FS=9.773;HRun=0;HaplotypeScore=145.4038;InbreedingCoeff=0.9197;MQ=69.42;MQ0=24;MQRankSum=-2.491;QD=2.84;ReadPosRankSum=-2.964;VQSLOD=1.3632;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:72.25:0,72,1699	0/0:6,0:6:18.06:0,18,443	0/0:37,0:35:93.26:0,93,2132	0/0:15,0:15:42.13:0,42,958	0/0:30,0:30:87.30:0,87,2122	0/0:33,0:32:96.30:0,96,2223	0/0:23,0:23:66.23:0,66,1625	1/1:18,0:6:11.84:100,12,0	1/1:4,0:3:6.01:96,6,0	0/0:25,0:25:72.23:0,72,1716	0/0:24,0:24:69.24:0,69,1698	0/0:26,0:26:75.26:0,75,1808	0/0:38,0:38:99:0,108,2594	0/0:33,0:33:93.32:0,93,2251	0/0:43,0:43:99:0,129,3074	0/0:29,0:29:84.29:0,84,2007	0/0:25,0:24:75.21:0,75,1746	0/0:13,0:13:39.13:0,39,960	0/0:30,0:27:78.26:0,78,1871	0/0:33,1:34:96.32:0,96,2315	0/0:37,0:36:99:0,105,2455	0/0:35,0:35:96.33:0,96,2352	0/0:28,0:28:81.26:0,81,1918	0/0:19,0:19:54.19:0,54,1330	0/0:20,0:20:60.21:0,60,1476	0/0:28,0:28:84.28:0,84,2014	0/0:50,0:50:99:0,148,3591	0/0:8,0:8:24.08:0,24,591
chr10	65153996	.	AAAAAGAAG	A	168.35	PASS	AB=0.854;AC=2;AF=0.036;AN=56;BaseQRankSum=0.253;DP=477;FS=2.624;HRun=0;HaplotypeScore=118.4649;InbreedingCoeff=-0.0375;MQ=49.05;MQ0=14;MQRankSum=-2.563;QD=5.81;ReadPosRankSum=-2.276;VQSLOD=1.6702;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:30:39.18:0,39,1174	0/0:10,0:10:10.41:0,10,446	0/0:10,0:6:18.06:0,18,436	0/0:6,0:5:12.04:0,12,211	0/0:12,0:9:21.07:0,21,644	0/0:16,0:16:36.12:0,36,747	0/0:18,0:16:30.57:0,31,671	0/1:10,7:16:71.19:243,0,71	0/0:16,0:14:31.13:0,31,490	0/0:19,0:14:36.12:0,36,826	0/0:16,0:14:30:0,30,462	0/0:16,0:13:12.98:0,13,305	0/0:10,0:8:11.99:0,12,209	0/1:12,0:11:0.78:1,0,323	0/0:16,0:13:19.42:0,19,354	0/0:11,0:11:15.05:0,15,300	0/0:41,0:39:75.72:0,76,1676	0/0:18,0:17:15.05:0,15,297	0/0:25,0:25:34.67:0,35,1201	0/0:16,0:13:33.11:0,33,644	0/0:11,0:10:18.06:0,18,358	0/0:10,0:9:24.08:0,24,525	0/0:25,0:21:52.79:0,53,1117	0/0:26,0:23:36.07:0,36,846	0/0:16,0:13:34:0,34,722	0/0:24,0:22:51.17:0,51,1194	0/0:18,0:17:41.50:0,42,856	0/0:10,0:7:9.03:0,9,171
chr10	65154638	.	G	GA	267.26	PASS	AB=0.660;AC=1;AF=0.019;AN=54;BaseQRankSum=3.541;DP=708;FS=19.769;HRun=7;HaplotypeScore=56.3822;InbreedingCoeff=-0.0272;MQ=48.57;MQ0=50;MQRankSum=-4.132;QD=7.64;ReadPosRankSum=-3.126;VQSLOD=-0.5053;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:62,0:50:84.12:0,84,805	0/0:14,0:13:21.03:0,21,203	0/0:13,0:2:6:0,6,52	./.	0/0:30,0:30:66.06:0,66,619	0/0:24,0:18:42.05:0,42,400	0/0:29,0:26:42.07:0,42,405	0/1:17,18:26:99:341,0,167	0/0:25,0:20:36.05:0,36,348	0/0:32,0:26:57.07:0,57,546	0/0:37,0:32:39:0,39,362	0/0:19,0:16:45.06:0,45,429	0/0:12,0:12:24.04:0,24,232	0/0:14,0:12:27.04:0,27,261	0/0:14,0:12:30.05:0,30,290	0/0:21,0:17:42.06:0,42,406	0/0:39,0:30:48.08:0,48,463	0/0:39,0:36:68.99:0,69,660	0/0:30,0:23:69.11:0,69,665	0/0:33,0:29:42:0,42,392	0/0:24,0:19:27.04:0,27,261	0/0:19,0:17:27.04:0,27,261	0/0:8,0:8:20.97:0,21,191	0/0:18,0:18:33.03:0,33,311	0/0:18,0:17:30.04:0,30,290	0/0:34,0:30:72.11:0,72,695	0/0:32,0:30:78.09:0,78,746	0/0:19,0:17:6.01:0,6,58
chr10	65155354	.	T	TG	424.10	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-0.564;DP=553;FS=0.000;HRun=1;HaplotypeScore=60.9609;InbreedingCoeff=0.9748;MQ=64.64;MQ0=12;MQRankSum=-4.812;QD=10.60;ReadPosRankSum=-2.517;VQSLOD=0.5624;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,2:37:99:0,105,1362	0/0:6,0:5:15.05:0,15,195	0/0:29,0:18:45.12:0,45,561	0/0:24,0:15:36.59:0,37,461	0/0:23,0:23:48.16:0,48,623	0/0:15,0:15:42.14:0,42,545	0/0:10,0:10:30.10:0,30,389	1/1:6,34:12:36.11:519,36,0	0/0:17,10:18:51.17:0,51,661	0/0:14,0:14:39.13:0,39,507	0/0:19,0:19:39.13:0,39,504	0/0:18,0:18:51.15:0,51,648	0/0:18,0:18:51.12:0,51,618	0/0:10,0:10:30.08:0,30,374	0/0:24,0:24:63.20:0,63,810	0/0:11,0:11:33.11:0,33,429	0/0:35,0:35:99:0,102,1324	0/0:29,0:29:83.06:0,83,1040	0/0:16,0:15:45.13:0,45,569	0/0:15,0:15:39.13:0,39,506	0/0:21,0:21:54.17:0,54,700	0/0:8,0:8:21.05:0,21,258	0/0:8,0:8:21.07:0,21,273	0/0:20,0:20:60.20:0,60,779	0/0:16,0:16:39.11:0,39,480	0/0:22,0:22:63.20:0,63,806	0/0:22,1:21:60.20:0,60,779	0/0:12,0:12:36.12:0,36,467
chr10	65156005	.	AGTGCTCTTAAGCCCCCCGG	A	2282.36	PASS	AB=0.815;AC=5;AF=0.119;AN=42;BaseQRankSum=7.209;DP=442;FS=40.444;HRun=0;HaplotypeScore=90.9267;InbreedingCoeff=0.5218;MQ=24.21;MQ0=203;MQRankSum=0.423;QD=29.64;ReadPosRankSum=1.329;VQSLOD=0.4461;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:41,12:37:99:928,0,1883	./.	./.	./.	./.	0/0:25,0:19:27.08:0,27,1845	0/0:22,0:11:21.07:0,21,840	1/1:8,10:10:30.05:504,30,0	1/1:0,6:6:18.06:970,18,0	0/0:11,0:5:12.01:0,12,848	0/0:22,0:2:3.01:0,3,159	0/0:12,0:11:24.07:0,24,1518	0/0:9,0:7:9.03:0,9,639	0/0:11,0:10:15.05:0,15,1296	0/0:20,0:17:20.60:0,21,1923	0/0:8,0:8:17.94:0,18,1375	0/0:23,0:11:9.03:0,9,546	0/0:25,0:10:12.04:0,12,631	0/0:18,0:10:30.10:0,30,2370	0/0:15,0:2:3.01:0,3,275	0/0:21,0:8:15.05:0,15,564	./.	./.	0/0:16,0:4:3.01:0,3,274	0/0:13,0:5:6.02:0,6,398	0/0:17,0:10:30.08:0,30,2114	0/0:16,0:13:17.85:0,18,1333	./.
chr10	65157326	.	CTTTTCTTTTTTTT	C	320.08	PASS	AB=0.659;AC=1;AF=0.018;AN=56;BaseQRankSum=3.550;DP=584;FS=1.186;HRun=0;HaplotypeScore=196.8187;InbreedingCoeff=0.2193;MQ=46.00;MQ0=31;MQRankSum=-3.711;QD=11.04;ReadPosRankSum=1.263;VQSLOD=2.8173;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:26:44.20:0,44,840	0/0:9,0:8:10.57:0,11,244	0/0:24,0:3:0:0,0,0	0/0:35,0:11:22.23:0,22,250	0/0:31,0:28:70.09:0,70,2512	0/0:21,0:20:47.85:0,48,977	0/0:12,0:12:32.98:0,33,546	0/0:16,0:10:28.78:0,29,275	0/1:14,15:28:99:394,0,676	0/0:26,0:23:57.06:0,57,1096	0/0:17,0:17:38.93:0,39,627	0/0:21,0:19:45.05:0,45,891	0/0:14,0:12:33.08:0,33,1064	0/0:20,0:18:35.27:0,35,930	0/0:22,0:20:35.79:0,36,776	0/0:21,0:20:58.15:0,58,1111	0/0:29,0:26:62.93:0,63,1173	0/0:17,0:15:32.89:0,33,676	0/0:29,0:26:44.63:0,45,1153	0/0:21,0:17:33.05:0,33,696	0/0:13,0:11:32.93:0,33,610	0/0:7,0:6:17.96:0,18,261	0/0:11,0:10:24:0,24,714	0/0:16,0:16:20.68:0,21,391	0/0:15,0:14:0.94:0,1,613	0/0:25,0:19:30.29:0,30,816	0/0:32,0:30:72.33:0,72,1629	0/0:14,0:13:32.82:0,33,436
chr10	65157408	.	A	AG	463.99	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-3.151;DP=578;FS=14.263;HRun=1;HaplotypeScore=68.8452;InbreedingCoeff=0.9887;MQ=55.26;MQ0=13;MQRankSum=-4.009;QD=18.56;ReadPosRankSum=-2.886;VQSLOD=2.1434;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:81.24:0,81,1036	0/0:10,0:10:27.09:0,27,351	0/0:14,0:9:24.06:0,24,297	0/0:20,0:19:52.38:0,52,631	0/0:24,0:24:66.20:0,66,843	0/0:26,0:24:66.21:0,66,857	0/0:27,0:27:66.21:0,66,857	1/1:2,23:21:39.07:559,39,0	0/0:29,0:27:75.24:0,75,973	0/0:21,0:19:51.17:0,51,662	0/0:18,0:16:39.13:0,39,506	0/0:17,0:17:48.16:0,48,623	0/0:8,0:8:24.08:0,24,312	0/0:12,0:12:36.12:0,36,467	0/0:20,0:20:57.19:0,57,740	0/0:17,0:17:45.15:0,45,584	0/0:39,0:37:99:0,99,1266	0/0:19,0:17:48.16:0,48,623	0/0:23,0:22:66.18:0,66,838	0/0:21,0:20:54.18:0,54,701	0/0:41,0:41:99:0,117,1519	0/0:17,0:16:45.15:0,45,584	0/0:8,0:8:21.07:0,21,272	0/0:19,0:19:51.17:0,51,662	0/0:17,0:17:51.14:0,51,646	0/0:31,0:30:84.27:0,84,1091	0/0:17,0:17:45.10:0,45,564	0/0:8,0:8:24.08:0,24,312
chr10	65157887	.	TA	T	379.28	PASS	AB=0.726;AC=1;AF=0.018;AN=56;BaseQRankSum=6.577;DP=699;FS=14.611;HRun=1;HaplotypeScore=79.7116;InbreedingCoeff=-0.0189;MQ=83.73;MQ0=4;MQRankSum=-6.568;QD=8.43;ReadPosRankSum=1.630;VQSLOD=-0.2957;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,141,2246	0/0:8,0:8:24.08:0,24,383	0/0:36,0:36:99:0,105,1636	0/0:40,0:40:99:0,117,1801	0/0:20,0:20:57.18:0,57,880	0/0:21,0:21:63.21:0,63,1007	0/0:44,0:44:99:0,126,1992	0/0:20,0:9:27.08:0,27,410	0/1:28,17:44:99:454,0,1212	0/0:26,0:26:75.26:0,75,1199	0/0:21,0:21:60.20:0,60,957	0/0:23,0:23:69.22:0,69,1078	0/0:22,0:22:66.21:0,66,1027	0/0:30,0:30:90.31:0,90,1427	0/0:31,0:31:93.30:0,93,1461	0/0:17,0:17:51.17:0,51,815	0/0:34,0:34:99:0,102,1603	0/0:25,0:25:75.26:0,75,1199	0/0:16,0:16:48.16:0,48,767	0/0:16,0:16:48.09:0,48,712	0/0:37,0:37:99:0,111,1726	0/0:12,0:12:36.12:0,36,576	0/0:11,0:11:33.11:0,33,528	0/0:35,0:35:99:0,105,1655	0/0:10,0:10:27.08:0,27,410	0/0:26,0:26:78.27:0,78,1248	0/0:21,0:20:63.21:0,63,1000	0/0:5,0:5:15.05:0,15,240
chr10	65158795	.	A	AAAACAAAACAACAACAACAACAAC	921.95	PASS	AB=0.973;AC=17;AF=0.315;AN=54;BaseQRankSum=5.678;DP=244;FS=16.989;HRun=0;HaplotypeScore=142.8318;InbreedingCoeff=-0.1260;MQ=43.86;MQ0=30;MQRankSum=-4.136;QD=7.62;ReadPosRankSum=8.815;VQSLOD=0.3987;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:12,0:9:4.48:4,0,124	0/0:4,0:4:8.74:0,9,104	0/0:19,0:4:9:0,9,197	0/0:13,0:6:12.83:0,13,132	0/0:17,0:16:41.85:0,42,420	0/1:14,0:13:18.02:18,0,126	1/1:5,0:3:4.44:15,4,0	./.	0/1:5,1:11:3.58:858,0,4	0/1:8,0:7:4.18:4,0,126	0/1:3,0:3:6.86:7,0,46	0/1:8,0:8:24.07:24,0,47	0/0:10,0:9:17.94:0,18,215	0/1:5,0:5:9.12:9,0,36	0/0:9,0:8:2.04:0,2,113	0/1:5,0:3:3.57:4,0,46	0/1:9,0:5:7.64:8,0,68	0/0:9,0:5:13.72:0,14,165	0/0:13,0:12:13.24:0,13,263	0/1:10,0:10:6.32:6,0,128	1/1:1,0:1:2.04:6,2,0	0/0:2,0:2:2.74:0,3,13	0/0:12,0:11:26.97:0,27,354	0/0:5,0:3:5.97:0,6,58	0/1:10,0:10:48.89:49,0,51	0/1:14,0:14:29.65:30,0,78	0/0:8,0:5:5.50:0,5,75	0/1:6,0:5:3.81:21,0,4
chr10	65159237	.	GT	G	941.83	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.130;DP=646;FS=6.754;HRun=6;HaplotypeScore=66.0269;InbreedingCoeff=0.9978;MQ=81.83;MQ0=8;MQRankSum=-5.331;QD=15.19;ReadPosRankSum=-1.407;VQSLOD=2.9374;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,99,1269	0/0:8,0:8:24.08:0,24,316	0/0:23,0:23:62.43:0,62,731	0/0:25,0:25:60.12:0,60,705	0/0:25,0:25:69.20:0,69,875	0/0:17,0:17:48.16:0,48,632	0/0:15,0:15:42.13:0,42,539	1/1:6,33:22:42.10:451,42,0	1/1:1,22:20:57.14:613,57,0	0/0:30,0:30:78.21:0,78,993	0/0:17,0:17:45.15:0,45,592	0/0:31,0:31:84.27:0,84,1105	0/0:23,0:23:63.18:0,63,801	0/0:21,0:21:63.19:0,63,813	0/0:15,0:15:42.14:0,42,553	0/0:31,0:31:93.30:0,93,1224	0/0:28,0:28:78.24:0,78,1012	0/0:9,0:9:27.05:0,27,336	0/0:18,0:18:45.10:0,45,560	0/0:34,0:34:84.26:0,84,1090	0/0:23,0:23:57.13:0,57,716	0/0:21,0:21:60.18:0,60,775	0/0:20,0:20:54.18:0,54,710	0/0:23,0:23:66.21:0,66,869	0/0:25,0:25:72.23:0,72,935	0/0:25,0:25:72.23:0,72,935	0/0:33,0:32:96.30:0,96,1248	0/0:9,0:9:27.06:0,27,326
chr10	65159263	.	AGC	A	66.50	PASS	AB=0.742;AC=1;AF=0.018;AN=56;BaseQRankSum=4.678;DP=598;FS=1.510;HRun=0;HaplotypeScore=75.1758;InbreedingCoeff=-0.0191;MQ=79.12;MQ0=1;MQRankSum=-1.900;QD=1.45;ReadPosRankSum=-2.725;VQSLOD=1.1112;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:90.28:0,90,1727	0/0:5,0:5:15.05:0,15,299	0/0:16,0:16:45.12:0,45,758	0/0:18,0:18:33.71:0,34,602	0/0:30,0:30:90.20:0,90,1736	0/0:17,0:17:51.17:0,51,994	0/0:17,0:17:51.10:0,51,843	0/1:30,16:29:99:141,0,462	0/0:26,0:26:75.24:0,75,1463	0/0:29,0:29:87.30:0,87,1731	0/0:20,0:20:60.21:0,60,1194	0/0:25,0:25:75.23:0,75,1417	0/0:19,0:19:57.18:0,57,1090	0/0:23,0:23:69.22:0,69,1343	0/0:13,0:13:39.13:0,39,779	0/0:29,0:29:87.27:0,87,1657	0/0:21,0:21:63.17:0,63,1183	0/0:10,0:10:30.08:0,30,562	0/0:13,0:13:39.13:0,39,739	0/0:30,0:30:90.28:0,90,1673	0/0:16,0:16:48.15:0,48,923	0/0:18,0:18:54.19:0,54,1068	0/0:18,0:18:54.17:0,54,1040	0/0:21,0:21:63.20:0,63,1193	0/0:19,0:19:57.20:0,57,1137	0/0:25,0:25:75.23:0,75,1386	0/0:37,0:35:99:0,108,1998	0/0:6,0:6:18.06:0,18,321
chr10	65159792	.	G	GC	1822.28	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-4.611;DP=659;FS=8.503;HRun=0;HaplotypeScore=57.3001;InbreedingCoeff=0.8941;MQ=64.45;MQ0=15;MQRankSum=-3.558;QD=33.75;ReadPosRankSum=-3.935;VQSLOD=1.4197;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:50:99:0,138,1888	0/0:8,0:8:24.08:0,24,334	0/0:21,0:8:24.06:0,24,316	0/0:18,0:11:29.74:0,30,345	0/0:19,0:19:54.18:0,54,753	0/0:21,0:21:63.21:0,63,879	0/0:17,0:17:48.16:0,48,671	1/1:2,52:45:99:1917,120,0	0/0:29,0:29:87.29:0,87,1213	0/0:22,0:21:60.19:0,60,822	0/0:8,0:8:18.06:0,18,252	0/0:18,0:18:54.18:0,54,754	0/0:25,0:25:72.24:0,72,1007	0/0:16,0:16:45.15:0,45,626	0/0:26,0:26:78.23:0,78,1069	0/0:19,0:18:54.18:0,54,755	0/0:40,0:39:99:0,117,1614	0/0:29,0:29:81.27:0,81,1133	0/0:18,0:17:51.16:0,51,696	0/0:16,0:16:48.14:0,48,653	0/0:52,0:52:99:0,147,2055	0/0:22,0:21:51.17:0,51,713	0/0:12,0:12:27.09:0,27,376	0/0:34,0:34:96.29:0,96,1322	0/0:21,0:19:48.16:0,48,671	0/0:22,0:22:66.22:0,66,923	0/0:18,0:18:54.18:0,54,746	0/0:2,0:2:6.02:0,6,84
chr10	65159929	.	TC	T	765.87	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-0.801;DP=611;FS=7.478;HRun=1;HaplotypeScore=68.4798;InbreedingCoeff=0.9211;MQ=66.25;MQ0=7;MQRankSum=-0.565;QD=17.41;ReadPosRankSum=-2.522;VQSLOD=2.6952;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:31:81.68:0,82,1097	0/0:9,0:9:25.55:0,26,280	0/0:39,0:17:10.42:0,10,103	0/0:19,0:11:10.85:0,11,69	0/0:24,0:24:70.62:0,71,786	0/0:30,0:30:82.82:0,83,1030	0/0:20,0:20:56.04:0,56,616	1/1:32,10:39:43.40:861,43,0	0/0:24,0:24:55.83:0,56,696	0/0:22,0:21:56.30:0,56,636	0/0:15,0:15:38.09:0,38,417	0/0:21,0:21:56.48:0,56,611	0/0:23,0:23:56.42:0,56,655	0/0:18,0:18:42.03:0,42,576	0/0:20,0:20:48.85:0,49,646	0/0:22,0:22:60.09:0,60,701	0/0:15,0:15:33.72:0,34,420	0/0:25,0:25:66.59:0,67,693	0/0:21,0:20:56.28:0,56,626	0/0:19,0:19:46.58:0,47,614	0/0:16,0:16:41.98:0,42,457	0/0:15,0:15:44.40:0,44,504	0/0:23,0:23:56.82:0,57,621	0/0:17,0:17:49.60:0,50,638	0/0:15,0:15:42.82:0,43,478	0/0:29,0:29:72.54:0,73,790	0/0:24,0:24:65.28:0,65,683	0/0:10,0:10:28.63:0,29,384
chr10	65160368	.	TTA	T	1310.56	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=8.725;DP=422;FS=20.975;HRun=0;HaplotypeScore=51.2327;InbreedingCoeff=0.7861;MQ=64.29;MQ0=0;MQRankSum=0.181;QD=32.76;ReadPosRankSum=-3.905;VQSLOD=2.0103;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:90.29:0,90,1531	0/0:3,0:3:9.03:0,9,156	0/0:4,0:4:9.03:0,9,139	0/0:9,0:7:20.90:0,21,292	0/0:16,0:16:39.13:0,39,658	0/0:18,0:18:42.13:0,42,695	0/0:9,0:9:21.06:0,21,326	1/1:3,37:40:99:1405,111,0	0/0:13,0:13:36.11:0,36,588	0/0:23,0:23:66.22:0,66,1102	0/0:13,0:13:30.10:0,30,510	0/0:9,0:9:27.09:0,27,462	0/0:9,0:9:24.06:0,24,384	0/0:10,0:10:30.10:0,30,507	0/0:15,0:15:45.15:0,45,776	0/0:10,0:10:27.09:0,27,455	0/0:22,0:21:57.20:0,57,987	0/0:12,0:12:21.07:0,21,335	0/0:21,0:21:54.17:0,54,892	0/0:8,0:8:18.06:0,18,312	0/0:9,0:9:15.05:0,15,260	0/0:2,0:2:6.02:0,6,104	0/0:11,0:11:24.08:0,24,412	0/0:9,0:9:21.07:0,21,363	0/0:18,0:18:45.15:0,45,779	0/0:32,0:32:87.30:0,87,1507	0/0:30,0:29:78.27:0,78,1348	0/0:15,0:15:39.13:0,39,665
chr10	65160454	.	AG	A	135.04	PASS	AB=0.750;AC=1;AF=0.018;AN=56;BaseQRankSum=3.873;DP=422;FS=0.000;HRun=1;HaplotypeScore=38.3247;InbreedingCoeff=-0.0289;MQ=78.76;MQ0=0;MQRankSum=-2.670;QD=4.09;ReadPosRankSum=-2.670;VQSLOD=-0.7518;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:31:94.56:0,95,1477	0/0:1,0:1:3.01:0,3,48	0/0:13,0:12:33.11:0,33,519	0/0:18,0:17:51.06:0,51,747	0/0:9,0:9:24.07:0,24,360	0/0:22,0:22:60.20:0,60,959	0/0:12,0:12:36.11:0,36,552	0/1:22,11:33:99:209,0,902	0/0:18,0:18:54.17:0,54,836	0/0:11,0:11:33.10:0,33,506	0/0:10,0:10:30.10:0,30,478	0/0:8,0:8:24.08:0,24,384	0/0:12,0:12:36.10:0,36,549	0/0:11,0:11:33.11:0,33,524	0/0:24,0:24:72.25:0,72,1151	0/0:17,0:17:51.17:0,51,815	0/0:26,0:26:78.27:0,78,1247	0/0:12,0:12:36.12:0,36,576	0/0:15,0:15:45.15:0,45,719	0/0:3,0:3:9.03:0,9,144	0/0:30,0:30:87.23:0,87,1315	0/0:3,0:3:9.03:0,9,144	0/0:10,0:10:30.10:0,30,480	0/0:20,0:20:60.18:0,60,934	0/0:11,0:11:33.07:0,33,478	0/0:18,0:18:54.18:0,54,864	0/0:15,0:15:45.14:0,45,694	0/0:8,0:8:24.08:0,24,383
chr10	65160918	.	TG	T	428.65	PASS	AB=0.687;AC=1;AF=0.018;AN=56;BaseQRankSum=6.330;DP=528;FS=12.668;HRun=5;HaplotypeScore=56.3043;InbreedingCoeff=-0.0186;MQ=89.99;MQ0=0;MQRankSum=-4.640;QD=9.32;ReadPosRankSum=-3.133;VQSLOD=-0.3766;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,102,1391	0/0:7,0:7:21.07:0,21,287	0/0:22,0:22:54.18:0,54,722	0/0:21,0:21:55.99:0,56,663	0/0:33,0:33:90.27:0,90,1190	0/0:11,0:11:33.11:0,33,451	0/0:24,0:24:69.22:0,69,928	0/1:25,21:46:99:503,0,692	0/0:24,0:24:72.20:0,72,943	0/0:10,0:11:30.09:0,30,391	0/0:9,0:9:27.05:0,27,348	0/0:13,0:13:36.12:0,36,491	0/0:14,0:14:33.09:0,33,434	0/0:16,0:16:45.15:0,45,615	0/0:17,0:17:51.16:0,51,682	0/0:15,0:15:45.14:0,45,600	0/0:25,0:25:72.24:0,72,985	0/0:21,0:21:60.16:0,60,794	0/0:21,0:21:48.12:0,48,632	0/0:12,0:12:36.12:0,36,491	0/0:34,0:34:90.16:0,90,1136	0/0:12,0:12:36.12:0,36,487	0/0:12,0:12:36.12:0,36,490	0/0:28,0:28:81.24:0,81,1076	0/0:9,0:9:27.09:0,27,369	0/0:17,0:17:51.17:0,51,697	0/0:11,0:11:33.11:0,33,451	0/0:7,0:7:21.07:0,21,286
chr10	65161086	.	T	TCAGA	1000.24	PASS	AB=0.731;AC=1;AF=0.018;AN=56;BaseQRankSum=-0.327;DP=615;FS=12.786;HRun=0;HaplotypeScore=120.2594;InbreedingCoeff=-0.0188;MQ=77.31;MQ0=1;MQRankSum=-6.871;QD=17.55;ReadPosRankSum=-3.083;VQSLOD=2.0445;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:87.28:0,87,1622	0/0:5,0:5:15.04:0,15,257	0/0:19,0:19:51.65:0,52,967	0/0:11,0:10:30.10:0,30,556	0/0:22,0:22:66.21:0,66,1245	0/0:21,0:21:54.19:0,54,1047	0/0:22,0:22:66.20:0,66,1215	0/1:36,20:57:99:1075,0,1648	0/0:23,0:23:69.19:0,69,1208	0/0:27,0:27:75.25:0,75,1423	0/0:24,0:24:69.23:0,69,1305	0/0:20,0:20:54.18:0,54,1009	0/0:23,0:23:63.19:0,63,1108	0/0:16,0:16:48.16:0,48,931	0/0:24,0:24:69.23:0,69,1306	0/0:24,0:24:66.21:0,66,1211	0/0:29,0:29:87.30:0,87,1674	0/0:21,0:21:48.16:0,48,930	0/0:17,0:16:48.16:0,48,930	0/0:20,0:20:57.17:0,57,1031	0/0:21,0:21:57.17:0,57,1035	0/0:20,0:20:57.20:0,57,1105	0/0:15,0:15:33.11:0,33,640	0/0:17,0:17:51.08:0,51,880	0/0:15,0:15:45.15:0,45,842	0/0:27,0:27:78.27:0,78,1512	0/0:28,0:28:84.26:0,84,1559	0/0:17,0:17:51.17:0,51,987
chr10	65161477	.	TC	T	677.75	PASS	AB=0.871;AC=4;AF=0.071;AN=56;BaseQRankSum=6.767;DP=627;FS=1.495;HRun=5;HaplotypeScore=63.9568;InbreedingCoeff=0.4875;MQ=73.51;MQ0=0;MQRankSum=-0.692;QD=8.58;ReadPosRankSum=0.622;VQSLOD=-0.0130;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,141,1859	0/0:9,0:9:27.09:0,27,361	0/0:19,0:19:51.17:0,51,678	0/1:21,2:22:6.70:7,0,525	0/0:18,0:18:48.14:0,48,633	0/0:19,0:19:57.18:0,57,764	0/0:25,0:25:72.22:0,72,966	0/1:29,8:37:99:170,0,936	1/1:0,19:19:54.15:613,54,0	0/0:25,0:25:69.17:0,69,922	0/0:14,0:14:42.14:0,42,573	0/0:15,0:15:45.12:0,45,582	0/0:23,0:23:69.22:0,69,927	0/0:23,0:23:69.22:0,69,929	0/0:25,0:25:75.25:0,75,1026	0/0:35,1:36:74.33:0,74,1401	0/0:30,0:30:90.28:0,90,1213	0/0:15,0:15:42.14:0,42,573	0/0:21,0:21:63.20:0,63,847	0/0:24,0:24:72.24:0,72,983	0/0:10,0:10:30.10:0,30,410	0/0:19,0:19:51.17:0,51,696	0/0:12,0:12:33.11:0,33,451	0/0:30,0:30:87.29:0,87,1188	0/0:17,0:17:51.17:0,51,692	0/0:25,0:25:72.14:0,72,936	0/0:31,0:31:84.24:0,84,1098	0/0:12,0:12:36.12:0,36,492
chr10	65161807	.	CTGTG	C	2452.10	PASS	AB=1.000;AC=37;AF=0.740;AN=50;BaseQRankSum=2.009;DP=430;FS=7.697;HRun=0;HaplotypeScore=95.5082;InbreedingCoeff=0.3014;MQ=42.20;MQ0=37;MQRankSum=1.153;QD=7.30;ReadPosRankSum=0.287;VQSLOD=1.7430;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:20:15.05:209,15,0	1/1:2,0:2:3.01:44,3,0	./.	./.	0/0:14,0:12:2.74:0,3,47	0/0:10,0:9:0.02:0,0,0	1/1:22,0:20:11.52:156,12,0	0/0:13,0:12:0:0,0,0	1/1:23,0:21:2.58:21,3,0	1/1:13,2:12:6:67,6,0	./.	1/1:17,0:14:8.07:131,8,0	0/1:13,0:12:12.16:12,0,112	1/1:11,0:10:12.04:157,12,0	1/1:21,0:23:27.07:309,27,0	1/1:9,0:8:3.01:35,3,0	1/1:35,0:32:26.30:347,26,0	1/1:18,0:16:21.07:295,21,0	1/1:11,0:12:6.02:80,6,0	0/0:7,5:11:0.47:0,0,1	0/1:36,0:34:5.37:299,0,5	1/1:7,5:11:1.25:3,1,0	0/1:10,0:10:6.41:6,0,84	0/0:34,0:30:12.36:0,12,356	1/1:10,0:10:8.79:121,9,0	1/1:20,4:22:11.99:159,12,0	1/1:10,0:8:3.01:36,3,0	1/1:10,0:5:6.02:88,6,0
chr10	65161831	.	GT	G	92.79	PASS	AB=0.667;AC=1;AF=0.018;AN=56;BaseQRankSum=-0.118;DP=457;FS=4.038;HRun=1;HaplotypeScore=88.0235;InbreedingCoeff=0.1127;MQ=47.53;MQ0=37;MQRankSum=-3.389;QD=9.28;ReadPosRankSum=-1.546;VQSLOD=0.7265;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:23:36.36:0,36,349	0/0:2,0:2:1.55:0,2,4	0/0:17,0:4:6.49:0,6,76	0/0:20,0:7:18.06:0,18,224	0/0:17,0:15:17.91:0,18,201	0/0:15,0:15:24.50:0,25,286	0/0:25,0:23:33.69:0,34,329	0/1:5,5:8:17.27:167,0,17	0/0:28,0:27:26.76:0,27,308	0/0:11,0:9:23.10:0,23,260	0/0:13,0:12:12.04:0,12,151	0/0:14,0:13:21.16:0,21,190	0/0:17,0:16:36.03:0,36,459	0/0:14,0:12:28.45:0,28,269	0/0:21,0:21:35.16:0,35,278	0/0:5,0:4:4.15:0,4,14	0/0:32,0:29:55.49:0,55,475	0/0:14,0:12:26.96:0,27,223	0/0:10,0:9:20.76:0,21,235	0/0:12,0:11:8.88:0,9,77	0/0:32,0:31:31.94:0,32,273	0/0:11,0:11:8.98:0,9,114	0/0:8,0:8:11.91:0,12,148	0/0:37,0:33:60.13:0,60,817	0/0:7,0:7:7.83:0,8,38	0/0:20,0:18:47.97:0,48,534	0/0:9,0:8:20.65:0,21,236	0/0:10,0:6:13.96:0,14,126
chr10	65161848	.	TGTGTGTGTG	T	247.82	PASS	AB=1.000;AC=4;AF=0.071;AN=56;BaseQRankSum=6.320;DP=493;FS=13.342;HRun=0;HaplotypeScore=142.6032;InbreedingCoeff=0.3523;MQ=57.26;MQ0=33;MQRankSum=-1.412;QD=5.39;ReadPosRankSum=1.564;VQSLOD=2.1582;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:64.81:0,65,769	0/0:3,0:3:6.02:0,6,85	0/0:42,0:19:57.16:0,57,696	0/0:37,0:20:57.16:0,57,709	0/0:18,0:17:27.09:0,27,500	0/0:18,0:18:42.04:0,42,592	0/0:24,0:24:21.68:0,22,679	0/0:15,0:14:3.29:0,3,20	1/1:13,5:18:13.31:259,13,0	0/0:15,0:12:24.52:0,25,401	0/0:12,0:11:12.04:0,12,191	0/0:11,0:11:24.38:0,24,377	0/0:16,0:15:32.71:0,33,749	0/0:13,0:11:32.11:0,32,452	0/1:22,0:22:82.43:82,0,372	0/0:6,0:5:14.64:0,15,174	0/0:31,0:29:60.69:0,61,788	0/0:13,0:11:31.48:0,31,427	0/0:10,0:8:19.61:0,20,284	0/0:13,0:12:26.96:0,27,348	0/0:23,0:22:11.93:0,12,394	0/0:13,0:13:15.50:0,15,233	0/0:8,0:8:14.14:0,14,383	0/0:42,0:39:81.25:0,81,1868	0/1:6,0:6:16.68:17,0,102	0/0:15,0:14:29.77:0,30,399	0/0:10,0:9:20.43:0,20,278	0/0:10,0:8:24.08:0,24,351
chr10	65162016	.	C	CG	1141.22	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-3.810;DP=626;FS=4.580;HRun=0;HaplotypeScore=62.7759;InbreedingCoeff=0.9878;MQ=76.75;MQ0=0;MQRankSum=-0.359;QD=38.04;ReadPosRankSum=-3.950;VQSLOD=2.1831;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:63,0:63:99:0,189,2506	0/0:8,0:8:24.01:0,24,291	0/0:16,0:15:36.12:0,36,489	0/0:29,0:29:69.02:0,69,1004	0/0:17,0:17:51.16:0,51,695	0/0:14,0:14:42.10:0,42,535	0/0:25,0:25:75.25:0,75,1046	1/1:2,28:30:84.10:1236,84,0	0/0:24,0:24:54.05:0,54,665	0/0:26,0:26:75.18:0,75,1020	0/0:24,0:24:69.21:0,69,931	0/0:18,0:18:51.15:0,51,678	0/0:16,0:16:48.14:0,48,647	0/0:17,0:17:51.17:0,51,711	0/0:24,0:24:66.21:0,66,903	0/0:10,0:10:27.09:0,27,373	0/0:38,0:38:99:0,114,1539	0/0:8,0:8:21.07:0,21,293	0/0:22,0:22:63.18:0,63,827	0/0:20,0:20:60.19:0,60,822	0/0:30,0:30:90.26:0,90,1205	0/0:19,0:19:54.17:0,54,733	0/0:9,0:9:27.08:0,27,360	0/0:38,0:38:99:0,108,1370	0/0:23,0:23:66.22:0,66,918	0/0:29,0:29:87.27:0,87,1184	0/0:20,0:20:57.19:0,57,787	0/0:7,0:7:21.07:0,21,293
chr10	65162195	.	C	CTTTTTTCT	1580.47	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=4.152;DP=458;FS=7.961;HRun=0;HaplotypeScore=130.3041;InbreedingCoeff=0.6814;MQ=65.35;MQ0=7;MQRankSum=-4.983;QD=39.51;ReadPosRankSum=-0.029;VQSLOD=2.7769;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:42.13:0,42,1036	0/0:4,0:4:12.04:0,12,282	0/0:27,0:11:7.87:0,8,145	0/0:14,0:11:19.70:0,20,298	0/0:20,0:20:51.15:0,51,1105	0/0:19,0:19:54.64:0,55,1362	0/0:16,0:16:44.97:0,45,950	1/1:5,0:3:6.02:93,6,0	1/1:5,7:14:42.14:1528,42,0	0/0:22,0:21:60.20:0,60,1427	0/0:17,0:17:44.94:0,45,1009	0/0:13,0:13:30.10:0,30,778	0/0:16,0:16:45.15:0,45,1135	0/0:19,0:19:54.19:0,54,1331	0/0:14,0:14:36.12:0,36,944	0/1:19,0:19:79.92:80,0,905	0/0:28,0:28:51.39:0,51,1441	0/0:16,0:15:34.09:0,34,804	0/0:33,0:32:73.21:0,73,1748	0/0:19,0:19:54.19:0,54,1353	0/0:10,0:10:27.06:0,27,580	0/0:12,0:12:33.11:0,33,758	0/0:9,0:9:24.08:0,24,578	0/0:8,0:8:12.99:0,13,266	0/0:11,0:11:26.45:0,26,545	0/0:21,0:21:63.22:0,63,1651	0/0:19,0:19:44.98:0,45,1161	0/0:15,0:14:36.08:0,36,768
chr10	65162220	.	T	TC	202.95	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.800;DP=517;FS=2.255;HRun=0;HaplotypeScore=84.1228;InbreedingCoeff=0.7615;MQ=61.22;MQ0=8;MQRankSum=-3.637;QD=12.68;ReadPosRankSum=2.389;VQSLOD=4.7229;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:41.94:0,42,370	0/0:5,0:5:14.95:0,15,138	0/0:30,0:6:16.47:0,16,74	0/0:19,0:12:1.10:0,1,43	0/0:22,0:22:56.14:0,56,492	0/0:25,0:25:68.89:0,69,619	0/0:12,0:12:35.96:0,36,335	0/0:8,0:5:10.80:0,11,64	1/1:5,11:16:31.61:297,32,0	0/0:27,0:25:69.65:0,70,591	0/0:18,0:18:44.10:0,44,426	0/0:15,0:15:38.91:0,39,336	0/0:19,0:19:47.25:0,47,395	0/0:17,0:17:47.05:0,47,411	0/0:18,0:18:42.04:0,42,389	0/0:22,0:22:56.53:0,57,532	0/0:31,0:31:86.89:0,87,756	0/0:16,0:15:35.88:0,36,293	0/0:27,0:27:58.41:0,58,640	0/0:31,0:30:72.81:0,73,655	0/0:9,0:9:24.03:0,24,226	0/0:16,0:16:41.43:0,41,398	0/0:11,0:11:28.57:0,29,288	0/0:9,0:9:19.84:0,20,195	0/0:12,0:12:35.99:0,36,358	0/0:27,0:27:74.63:0,75,668	0/0:26,0:26:69.91:0,70,571	0/0:10,0:9:24.01:0,24,219
chr10	65162234	.	TGC	T	270.90	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-0.023;DP=430;FS=27.784;HRun=0;HaplotypeScore=76.7247;InbreedingCoeff=0.9226;MQ=73.74;MQ0=6;MQRankSum=2.012;QD=27.09;ReadPosRankSum=-3.509;VQSLOD=1.6343;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:20.77:0,21,395	0/0:5,0:5:15.04:0,15,198	0/0:31,0:10:23.24:0,23,316	0/0:19,0:14:30.02:0,30,252	0/0:17,0:17:39.13:0,39,546	0/0:22,0:23:66.07:0,66,830	0/0:11,0:11:30.09:0,30,413	1/1:0,10:10:30.06:365,30,0	0/0:15,0:15:32.94:0,33,476	0/0:18,0:16:44.67:0,45,560	0/0:13,0:13:33.09:0,33,440	0/0:13,0:13:29.91:0,30,365	0/0:16,0:16:33.06:0,33,461	0/0:12,0:12:33.10:0,33,446	0/0:13,0:15:32.86:0,33,399	0/0:20,0:21:49.17:0,49,578	0/0:24,0:26:56.30:0,56,575	0/0:8,0:8:14.97:0,15,138	0/0:20,0:20:57.04:0,57,803	0/0:27,0:27:72.11:0,72,888	0/0:8,0:8:21.06:0,21,258	0/0:15,0:15:35.84:0,36,473	0/0:8,0:9:23.75:0,24,295	0/0:7,0:8:12.03:0,12,158	0/0:11,0:11:33.10:0,33,436	0/0:18,0:18:54.16:0,54,750	0/0:16,0:16:35.81:0,36,450	0/0:7,0:7:21.04:0,21,241
chr10	65162647	.	T	TG	136.48	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.475;DP=665;FS=0.000;HRun=1;HaplotypeScore=63.9156;InbreedingCoeff=0.9673;MQ=67.07;MQ0=7;MQRankSum=0.183;QD=7.58;ReadPosRankSum=-3.692;VQSLOD=-0.7455;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,123,1579	0/0:14,0:14:42.11:0,42,528	0/0:24,0:23:29.07:0,29,702	0/0:20,0:19:32.48:0,32,483	0/0:26,0:26:72.20:0,72,905	0/0:22,0:22:66.21:0,66,857	0/0:28,0:28:84.26:0,84,1077	1/1:5,13:7:15.05:225,15,0	0/0:28,0:28:84.27:0,84,1090	0/0:29,0:29:87.28:0,87,1130	0/0:22,0:22:63.20:0,63,814	0/0:39,0:39:99:0,114,1467	0/0:14,0:14:42.14:0,42,544	0/0:15,0:15:42.12:0,42,531	0/0:25,0:25:75.24:0,75,974	0/0:26,0:26:75.23:0,75,960	0/0:34,0:34:99:0,99,1286	0/0:19,0:19:57.19:0,57,739	0/0:21,0:21:60.17:0,60,751	0/0:19,0:18:45.15:0,45,582	0/0:44,0:44:99:0,123,1582	0/0:16,0:16:48.16:0,48,623	0/0:24,0:24:69.22:0,69,896	0/0:31,0:31:90.29:0,90,1168	0/0:11,0:11:33.11:0,33,429	0/0:23,0:23:69.22:0,69,895	0/0:26,0:26:72.21:0,72,907	0/0:5,0:5:15.05:0,15,195
chr10	65163675	.	AG	A	622.72	PASS	AC=2;AF=0.037;AN=54;BaseQRankSum=7.011;DP=617;FS=6.778;HRun=2;HaplotypeScore=54.2019;InbreedingCoeff=0.3361;MQ=33.84;MQ0=154;MQRankSum=1.697;QD=16.39;ReadPosRankSum=1.665;VQSLOD=3.3812;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:11:12.04:0,12,179	0/0:16,0:7:3.01:0,3,45	0/0:26,0:1:3.01:0,3,45	./.	0/0:22,0:21:45.11:0,45,671	0/0:9,0:6:6.02:0,6,90	0/0:16,0:10:9.03:0,9,135	0/0:92,0:69:99:0,205,3025	1/1:2,36:36:57.10:716,57,0	0/0:26,0:16:48.16:0,48,717	0/0:18,0:11:15.05:0,15,224	0/0:15,0:11:15.05:0,15,224	0/0:26,0:26:30.01:0,30,449	0/0:14,0:5:2.99:0,3,44	0/0:23,0:13:18.06:0,18,268	0/0:16,0:6:3.01:0,3,45	0/0:18,0:11:9.03:0,9,135	0/0:9,0:7:3.01:0,3,45	0/0:7,0:1:3.01:0,3,45	0/0:10,0:6:5.98:0,6,65	0/0:26,0:20:8.60:0,9,134	0/0:19,0:11:18.06:0,18,268	0/0:11,0:11:18.06:0,18,270	0/0:26,0:25:33.11:0,33,495	0/0:14,0:10:27.09:0,27,400	0/0:22,0:15:45.15:0,45,673	0/0:33,0:21:42.04:0,42,612	0/0:12,0:6:9.03:0,9,135
chr10	65163873	.	G	GA	693.55	PASS	AB=0.653;AC=1;AF=0.018;AN=56;BaseQRankSum=4.614;DP=692;FS=3.077;HRun=4;HaplotypeScore=96.1143;InbreedingCoeff=-0.0184;MQ=54.70;MQ0=42;MQRankSum=-2.575;QD=11.19;ReadPosRankSum=-1.584;VQSLOD=1.0869;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:36:75.21:0,75,850	0/0:11,0:11:30.09:0,30,340	0/0:24,0:12:30.06:0,30,328	0/0:24,0:13:33.02:0,33,337	0/0:33,0:33:81.23:0,81,918	0/0:21,0:19:48.13:0,48,544	0/0:20,0:18:45.13:0,45,509	0/1:29,33:37:99:768,0,238	0/0:52,0:49:99:0,108,1212	0/0:29,0:28:78.22:0,78,885	0/0:14,0:12:21.05:0,21,238	0/0:23,0:19:42.12:0,42,476	0/0:16,0:15:42.12:0,42,476	0/0:17,0:17:42.12:0,42,476	0/0:30,0:25:69.20:0,69,783	0/0:22,0:22:60.17:0,60,681	0/0:21,0:16:36.10:0,36,408	0/0:19,0:18:48.14:0,48,545	0/0:12,0:11:33.09:0,33,374	0/0:21,0:21:39.10:0,39,442	0/0:26,0:20:48.13:0,48,544	0/0:20,0:19:33.09:0,33,374	0/0:23,0:23:60.17:0,60,680	0/0:26,0:26:75.19:0,75,839	0/0:25,0:24:60.17:0,60,680	0/0:27,0:25:72.21:0,72,816	0/0:23,0:22:60.17:0,60,680	0/0:10,0:10:30.09:0,30,340
chr10	65164166	.	T	TC	14922.09	PASS	AB=0.765;AC=41;AF=0.732;AN=56;BaseQRankSum=13.893;DP=605;FS=1.118;HRun=2;HaplotypeScore=130.4417;InbreedingCoeff=0.8986;MQ=67.65;MQ0=21;MQRankSum=-0.415;QD=33.23;ReadPosRankSum=2.661;VQSLOD=4.4955;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,24:26:60.19:845,60,0	1/1:2,8:10:18.06:256,18,0	0/0:23,0:18:45.07:0,45,505	0/0:15,0:13:34.48:0,34,372	0/0:23,0:23:61:0,61,733	1/1:2,17:19:42.14:594,42,0	1/1:2,18:20:51.17:733,51,0	0/1:45,20:42:99:761,0,517	0/0:24,0:23:66.21:0,66,818	1/1:1,16:17:48.16:690,48,0	1/1:0,13:12:33.11:473,33,0	1/1:1,8:9:15.05:216,15,0	0/0:14,0:14:42.12:0,42,508	1/1:1,16:16:11.12:570,11,0	1/1:0,25:25:72.24:1035,72,0	1/1:2,13:15:36.12:518,36,0	1/1:0,34:34:99:1424,99,0	1/1:0,13:13:39.13:561,39,0	1/1:3,15:18:45.12:625,45,0	1/1:1,18:19:54.18:776,54,0	1/1:1,36:37:84.07:1200,84,0	1/1:1,16:17:51.17:727,51,0	0/0:16,0:16:47.97:0,48,544	0/0:41,0:41:99:0,114,1410	1/1:0,21:21:54.18:777,54,0	1/1:1,22:23:69.13:937,69,0	1/1:1,11:12:33.06:471,33,0	1/1:0,18:17:51.17:733,51,0
chr10	65164218	.	TG	T	991.85	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-3.349;DP=699;FS=4.532;HRun=1;HaplotypeScore=174.9035;InbreedingCoeff=0.9991;MQ=62.70;MQ0=21;MQRankSum=-1.428;QD=18.37;ReadPosRankSum=-4.169;VQSLOD=2.3551;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:69.70:0,70,1005	0/0:15,0:15:42.14:0,42,599	0/0:26,0:20:55.38:0,55,699	0/0:29,0:23:65.92:0,66,792	0/0:27,0:27:78.24:0,78,1119	0/0:14,0:14:36.12:0,36,532	0/0:21,0:21:37.44:0,37,751	1/1:6,48:31:87.05:1087,87,0	0/0:29,0:29:80.53:0,81,1046	0/0:25,0:25:75.22:0,75,1038	0/0:21,0:19:57.19:0,57,822	0/0:13,0:13:30.10:0,30,452	0/0:21,0:21:63.21:0,63,938	0/0:17,0:17:48.16:0,48,726	0/0:31,0:31:93.15:0,93,1289	0/0:22,0:22:66.13:0,66,871	0/0:39,0:39:99:0,114,1673	0/0:21,0:21:63.17:0,63,920	0/0:17,0:17:50.65:0,51,675	0/0:25,0:25:72.21:0,72,1016	0/0:37,0:37:71.26:0,71,1241	0/0:22,0:22:66.13:0,66,904	0/0:19,0:19:57.19:0,57,842	0/0:33,0:33:99:0,99,1416	0/0:27,0:27:72.21:0,72,1025	0/0:31,0:31:93.28:0,93,1305	0/0:23,0:22:63.14:0,63,834	0/0:12,0:12:36.12:0,36,524
chr10	65164245	.	T	TC	64.78	PASS	AB=0.745;AC=1;AF=0.018;AN=56;BaseQRankSum=2.981;DP=691;FS=1.046;HRun=0;HaplotypeScore=165.0574;InbreedingCoeff=-0.0183;MQ=58.84;MQ0=6;MQRankSum=-5.085;QD=1.85;ReadPosRankSum=1.115;VQSLOD=2.3019;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:75.21:0,75,861	0/0:15,0:15:39.11:0,39,449	0/0:26,0:18:46.63:0,47,564	0/0:27,0:20:33.03:0,33,683	0/0:28,0:28:81.27:0,81,1132	0/0:15,0:15:39.12:0,39,464	0/0:18,0:18:53.72:0,54,580	0/0:16,0:14:21.59:0,22,129	0/1:23,12:35:99:139,0,206	0/0:25,0:24:68.85:0,69,747	0/0:18,0:16:48.06:0,48,531	0/0:15,0:15:39.07:0,39,440	0/0:27,0:27:81.26:0,81,1115	0/0:21,0:21:57.17:0,57,665	0/0:34,0:34:99:0,102,1173	0/0:22,0:22:63.18:0,63,727	0/0:38,0:38:99:0,102,1192	0/0:21,0:21:63.19:0,63,741	0/0:13,0:13:33.01:0,33,339	0/0:23,0:23:66.12:0,66,745	0/0:37,0:37:98.27:0,98,1056	0/0:23,0:23:63.18:0,63,729	0/0:19,0:19:57.18:0,57,782	0/0:43,0:43:99:0,129,1736	0/0:28,0:28:69.15:0,69,779	0/0:32,0:32:84.23:0,84,1021	0/0:25,0:25:69.20:0,69,804	0/0:17,0:17:51.15:0,51,587
chr10	65164246	.	T	TTGTTC	913.31	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-2.216;DP=695;FS=11.148;HRun=0;HaplotypeScore=220.0338;InbreedingCoeff=0.9195;MQ=60.28;MQ0=6;MQRankSum=-2.342;QD=26.09;ReadPosRankSum=-1.101;VQSLOD=2.0966;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:69.06:0,69,1040	0/0:15,0:15:33.01:0,33,557	0/0:27,0:19:42.44:0,42,650	0/0:29,0:22:56.72:0,57,933	0/0:28,0:28:81.27:0,81,1699	0/0:16,0:16:39.04:0,39,598	0/0:18,0:18:48:0,48,636	0/0:16,0:14:20.82:0,21,274	1/1:23,12:35:8.15:996,8,0	0/0:25,0:24:68.35:0,68,1004	0/0:18,0:16:42.08:0,42,713	0/0:15,0:15:36.03:0,36,537	0/0:27,0:27:78.26:0,78,1573	0/0:21,0:21:54.06:0,54,853	0/0:34,0:34:99:0,99,1587	0/0:22,0:22:62.97:0,63,874	0/0:37,0:37:99:0,102,1626	0/0:23,0:23:60.09:0,60,976	0/0:13,0:13:23.90:0,24,324	0/0:23,0:23:60.11:0,60,972	0/0:37,0:37:90.04:0,90,1285	0/0:22,0:22:60.09:0,60,943	0/0:19,0:19:57.18:0,57,1156	0/0:43,0:43:99:0,126,2267	0/0:28,0:28:69.02:0,69,953	0/0:32,0:32:86.75:0,87,1139	0/0:25,0:25:63.11:0,63,997	0/0:17,0:17:45.04:0,45,624
chr10	65164427	.	GT	G	739.89	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-3.607;DP=711;FS=1.640;HRun=4;HaplotypeScore=189.5060;InbreedingCoeff=0.9811;MQ=62.27;MQ0=2;MQRankSum=2.452;QD=24.66;ReadPosRankSum=-2.787;VQSLOD=1.2206;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:48:99:0,105,1284	0/0:13,0:13:36.12:0,36,470	0/0:38,0:34:66.50:0,66,1070	0/0:29,0:18:50.29:0,50,624	0/0:28,0:28:73.34:0,73,1007	0/0:27,0:27:69.69:0,70,892	0/0:20,0:20:45.14:0,45,585	1/1:4,26:29:72.17:835,72,0	0/0:26,0:26:73.22:0,73,962	0/0:36,0:35:99:0,105,1323	0/0:11,0:11:30.10:0,30,394	0/0:22,0:22:53.62:0,54,638	0/0:19,0:19:51.17:0,51,710	0/0:23,0:23:57.19:0,57,746	0/0:32,0:32:72.23:0,72,938	0/0:29,0:29:69.22:0,69,900	0/0:25,0:25:57.64:0,58,719	0/0:11,0:11:25.90:0,26,324	0/0:24,0:23:65.14:0,65,794	0/0:12,0:10:27.09:0,27,356	0/0:13,0:13:30.07:0,30,382	0/0:23,0:22:54.18:0,54,723	0/0:22,0:22:63.18:0,63,829	0/0:44,0:44:99:0,120,1615	0/0:25,0:25:66.20:0,66,862	0/0:31,0:31:89.79:0,90,1129	0/0:42,0:40:99:0,114,1403	0/0:7,0:7:15.05:0,15,199
chr10	65164445	.	TTTG	T	16234.28	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=11.202;DP=670;FS=0.693;HRun=0;HaplotypeScore=148.1329;InbreedingCoeff=0.9871;MQ=57.56;MQ0=4;MQRankSum=-4.199;QD=35.92;ReadPosRankSum=5.616;VQSLOD=5.5115;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,39:41:90.25:1477,90,0	1/1:1,13:14:36.12:598,36,0	0/0:36,0:28:56.72:0,57,1103	0/0:23,0:11:30.09:0,30,454	0/0:33,0:33:90.30:0,90,1835	1/1:1,26:27:62.70:1032,63,0	1/1:0,17:17:36.12:614,36,0	0/0:30,0:29:75.21:0,75,1075	0/0:24,0:24:13.95:0,14,506	1/1:3,32:34:99:1551,99,0	1/1:3,17:20:48.11:696,48,0	1/1:2,15:17:27.75:555,28,0	0/0:14,0:14:42.13:0,42,848	1/1:1,24:25:51.17:860,51,0	1/1:0,25:25:66.23:1106,66,0	1/1:1,21:22:48.16:809,48,0	1/1:2,25:27:51.17:849,51,0	1/1:0,10:10:18.06:299,18,0	1/1:2,20:22:54.16:832,54,0	1/1:2,14:14:30.10:468,30,0	1/1:2,8:10:15.05:256,15,0	1/1:3,19:20:33.11:534,33,0	0/0:20,0:20:57.17:0,57,1095	0/0:38,0:38:99:0,105,2215	1/1:4,21:25:45.15:758,45,0	1/1:0,24:24:72.22:1132,72,0	1/1:1,43:44:95.84:1615,96,0	1/1:1,8:9:12.04:194,12,0
chr10	65164448	.	G	GT	2861.62	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=17.055;DP=658;FS=0.000;HRun=3;HaplotypeScore=172.6438;InbreedingCoeff=0.8926;MQ=56.10;MQ0=3;MQRankSum=-4.047;QD=6.08;ReadPosRankSum=5.720;VQSLOD=0.3921;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:41,0:40:35.41:221,35,0	1/1:14,0:14:8.06:28,8,0	0/0:29,0:24:44.66:0,45,704	0/0:23,0:11:24.06:0,24,276	0/0:34,0:34:93.22:0,93,1089	1/1:26,0:26:20.89:79,21,0	1/1:17,0:17:9.91:32,10,0	0/0:28,0:27:69.16:0,69,778	1/1:5,18:23:63.19:803,63,0	1/1:36,0:35:42.37:289,42,0	1/1:20,0:20:26.91:272,27,0	1/1:16,0:16:11.97:61,12,0	0/0:14,0:14:42.13:0,42,503	1/1:24,0:24:14.95:81,15,0	1/1:26,0:26:19.70:125,20,0	1/1:21,0:21:16.45:86,16,0	1/1:26,0:26:16.76:65,17,0	1/1:10,0:10:7.46:56,7,0	1/1:23,0:22:23.40:111,23,0	1/1:15,0:14:14.45:127,14,0	1/1:10,0:10:4.48:15,4,0	1/1:21,0:19:11.50:70,12,0	0/0:19,0:19:51.16:0,51,612	0/0:39,0:39:99:0,105,1251	1/1:22,0:22:16.26:72,16,0	1/1:26,0:26:31.97:284,32,0	1/1:45,0:44:31.01:158,31,0	1/1:9,0:9:4.41:27,4,0
chr10	65164452	.	G	GT	564.14	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=-0.707;DP=664;FS=5.869;HRun=3;HaplotypeScore=183.9729;InbreedingCoeff=0.6791;MQ=55.95;MQ0=3;MQRankSum=-1.810;QD=19.45;ReadPosRankSum=-3.401;VQSLOD=1.9037;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:41:65.19:0,65,407	0/0:14,0:14:30.70:0,31,201	0/0:29,0:23:43.09:0,43,632	0/0:19,1:8:21.06:0,21,249	0/0:36,0:36:99:0,99,1173	0/0:28,0:28:23.08:0,23,298	0/0:17,0:17:34.84:0,35,206	0/0:30,0:29:66.19:0,66,765	1/1:4,16:20:57.04:658,57,0	0/0:35,0:34:74.54:0,75,408	0/0:21,0:21:8.46:0,8,175	0/0:16,0:16:36.80:0,37,196	0/0:16,0:16:42.11:0,42,492	0/0:24,0:24:42.24:0,42,238	0/0:27,0:27:58.77:0,59,333	0/0:21,0:21:41.06:0,41,230	0/0:27,0:27:41.08:0,41,251	0/0:9,0:9:13.95:0,14,79	0/0:21,0:20:37.95:0,38,236	0/0:16,0:15:23.51:0,24,129	0/0:10,0:10:16.99:0,17,85	0/0:22,0:20:29.06:0,29,187	0/0:18,0:18:51.16:0,51,612	0/0:40,0:40:99:0,100,1188	0/0:22,0:22:29.56:0,30,187	0/0:29,0:29:67.48:0,67,352	0/0:45,0:44:85.70:0,86,500	0/1:9,0:9:3.10:3,0,35
chr10	65164667	.	A	AAG	243.07	PASS	AB=0.714;AC=1;AF=0.018;AN=56;BaseQRankSum=-1.344;DP=620;FS=26.010;HRun=0;HaplotypeScore=98.7034;InbreedingCoeff=-0.0196;MQ=51.90;MQ0=13;MQRankSum=-4.151;QD=5.40;ReadPosRankSum=-0.863;VQSLOD=1.2922;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:72.24:0,72,1008	0/0:6,0:6:18.06:0,18,252	0/0:29,0:16:39.12:0,39,515	0/0:25,0:18:48.16:0,48,651	0/0:16,0:16:42.14:0,42,585	0/0:19,0:19:45.15:0,45,630	0/0:24,0:24:69.19:0,69,913	0/1:27,18:29:99:318,0,481	0/0:17,0:17:45.15:0,45,630	0/0:26,0:25:75.24:0,75,1032	0/0:14,0:13:29.95:0,30,418	0/0:22,0:22:48:0,48,669	0/0:16,0:16:42.14:0,42,587	0/0:20,0:20:42.10:0,42,587	0/0:27,0:27:63.20:0,63,866	0/0:21,0:21:51.17:0,51,714	0/0:24,0:24:63.21:0,63,881	0/0:26,0:26:66.15:0,66,881	0/0:13,0:11:33.07:0,33,439	0/0:24,0:24:63.21:0,63,882	0/0:49,0:49:99:0,123,1701	0/0:16,0:16:39.13:0,39,544	0/0:21,0:21:63.21:0,63,878	0/0:29,0:29:78.22:0,78,1069	0/0:13,0:13:30.10:0,30,420	0/0:26,0:26:66.16:0,66,882	0/0:17,0:17:45.15:0,45,630	0/0:4,0:4:12.04:0,12,168
chr10	65164722	.	CGT	C	487.88	PASS	AB=0.930;AC=17;AF=0.327;AN=52;BaseQRankSum=3.744;DP=602;FS=1.059;HRun=0;HaplotypeScore=128.2161;InbreedingCoeff=0.0733;MQ=57.17;MQ0=18;MQRankSum=0.566;QD=1.75;ReadPosRankSum=3.688;VQSLOD=2.1715;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:34:3.01:0,3,45	0/0:6,0:6:5.97:0,6,81	./.	./.	0/0:18,0:18:17.98:0,18,179	0/1:19,3:20:23.05:23,0,79	0/1:24,0:23:23.06:23,0,59	0/0:48,0:39:10.91:0,11,53	1/1:4,0:12:17.04:84,17,0	0/1:31,1:32:20.02:20,0,116	0/0:13,0:12:6.02:0,6,88	0/1:16,3:18:78.13:78,0,108	1/1:10,4:14:8.73:95,9,0	0/0:14,0:14:9.09:0,9,93	0/1:25,1:25:10.99:11,0,243	0/1:16,0:15:26.03:26,0,38	0/1:25,4:28:49.15:49,0,73	0/0:30,0:26:18.05:0,18,247	0/0:21,0:17:9.03:0,9,127	0/0:12,0:11:3.01:0,3,44	0/0:46,1:44:23.95:0,24,239	0/0:17,0:17:21.04:0,21,269	1/1:12,1:13:6.01:60,6,0	1/1:24,4:29:23.90:149,24,0	0/1:21,2:21:14:14,0,200	0/0:26,0:23:11.97:0,12,96	0/1:15,1:17:19.09:19,0,281	0/0:7,0:4:2.99:0,3,23
chr10	65164726	.	T	TG	925.72	PASS	AB=0.663;AC=1;AF=0.018;AN=56;BaseQRankSum=4.826;DP=651;FS=52.570;HRun=1;HaplotypeScore=133.1158;InbreedingCoeff=-0.0215;MQ=54.28;MQ0=20;MQRankSum=-3.370;QD=15.69;ReadPosRankSum=-0.875;VQSLOD=0.4086;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:34:39.57:0,40,481	0/0:8,0:8:18.52:0,19,218	0/0:10,0:9:27.05:0,27,312	0/0:12,0:7:20.36:0,20,193	0/0:19,0:19:30.10:0,30,384	0/0:25,0:22:27.01:0,27,305	0/0:28,0:27:57.09:0,57,689	0/1:29,30:49:99:1000,0,139	0/0:12,0:12:23.23:0,23,147	0/0:34,0:34:85.47:0,85,944	0/0:13,0:12:12.04:0,12,154	0/0:18,0:17:35.91:0,36,398	0/0:17,0:17:27.35:0,27,284	0/0:17,0:17:24.54:0,25,294	0/0:26,0:25:51.08:0,51,620	0/0:17,0:16:33.04:0,33,400	0/0:30,0:29:63.94:0,64,748	0/0:33,0:28:67.06:0,67,814	0/0:22,0:17:45.13:0,45,561	0/0:12,0:11:24.08:0,24,306	0/0:53,0:49:99:0,106,1302	0/0:18,0:18:27.09:0,27,348	0/0:14,0:14:17.93:0,18,176	0/0:34,0:31:62.52:0,63,633	0/0:24,0:21:48.09:0,48,592	0/0:30,0:27:69.18:0,69,838	0/0:20,0:20:48.43:0,48,547	0/0:8,0:4:12.04:0,12,150
chr10	65165518	.	AT	A	8616.79	PASS	AB=1.000;AC=41;AF=0.732;AN=56;BaseQRankSum=2.382;DP=566;FS=8.297;HRun=9;HaplotypeScore=63.8111;InbreedingCoeff=0.9351;MQ=64.75;MQ0=2;MQRankSum=-1.478;QD=20.71;ReadPosRankSum=2.444;VQSLOD=5.5148;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,31:32:83.99:760,84,0	1/1:1,10:10:21.01:192,21,0	0/0:14,0:15:25.77:0,26,279	0/0:19,0:17:24.19:0,24,269	0/0:32,0:32:75.14:0,75,838	1/1:2,21:23:53.98:486,54,0	1/1:3,12:15:33.02:302,33,0	0/1:8,0:8:5.85:6,0,7	0/0:15,0:15:41.03:0,41,252	1/1:4,18:21:48:435,48,0	1/1:1,19:20:45.02:412,45,0	1/1:1,26:27:75.04:686,75,0	0/0:22,0:22:54.15:0,54,614	1/1:1,10:11:24.01:220,24,0	1/1:1,25:26:63.02:576,63,0	1/1:1,16:17:36.01:329,36,0	1/1:2,23:25:59.95:538,60,0	1/1:1,15:16:42.02:384,42,0	1/1:1,14:15:42.01:380,42,0	1/1:3,27:25:57.03:522,57,0	1/1:1,9:10:27.01:247,27,0	1/1:3,20:22:51.03:466,51,0	0/0:27,0:28:69.02:0,69,764	0/0:19,0:19:45.13:0,45,520	1/1:3,19:18:39.01:357,39,0	1/1:5,17:21:48.01:439,48,0	1/1:2,27:29:69.03:631,69,0	1/1:3,9:12:27.01:247,27,0
chr10	65165520	.	T	TCCA	92.47	PASS	AB=0.667;AC=1;AF=0.018;AN=56;BaseQRankSum=3.171;DP=554;FS=7.996;HRun=0;HaplotypeScore=112.2915;InbreedingCoeff=-0.0185;MQ=65.06;MQ0=2;MQRankSum=-3.354;QD=11.56;ReadPosRankSum=-1.351;VQSLOD=2.4752;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:90.19:0,90,987	0/0:10,0:9:21.05:0,21,227	0/0:15,0:15:42.13:0,42,701	0/0:18,0:16:42.08:0,42,679	0/0:31,0:31:87.25:0,87,1551	0/0:23,0:23:60.16:0,60,698	0/0:16,0:16:36.09:0,36,410	0/1:4,4:8:92.70:167,0,93	0/0:19,0:19:42.14:0,42,739	0/0:21,0:20:60.16:0,60,704	0/0:20,0:20:51.13:0,51,594	0/0:26,0:26:75.19:0,75,811	0/0:20,0:20:57.18:0,57,1025	0/0:10,0:10:24.06:0,24,260	0/0:26,0:26:69.09:0,69,721	0/0:17,0:17:42.07:0,42,463	0/0:25,0:25:66.16:0,66,738	0/0:16,0:16:45.12:0,45,508	0/0:14,0:14:42.11:0,42,459	0/0:28,0:23:60.15:0,60,670	0/0:10,0:10:27.07:0,27,292	0/0:21,0:20:54.14:0,54,606	0/0:27,0:27:78.27:0,78,1437	0/0:19,0:19:48.31:0,48,894	0/0:21,0:17:45.08:0,45,497	0/0:23,0:22:60.14:0,60,701	0/0:29,0:29:75.19:0,75,854	0/0:9,0:9:27.07:0,27,292
chr10	65165527	.	T	TA	423.79	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-2.486;DP=552;FS=1.023;HRun=3;HaplotypeScore=90.8732;InbreedingCoeff=0.8823;MQ=64.62;MQ0=3;MQRankSum=0.868;QD=22.30;ReadPosRankSum=0.064;VQSLOD=2.9658;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:84.33:0,84,482	0/0:11,0:10:23.27:0,23,132	0/0:15,0:15:18.65:0,19,236	0/0:16,0:14:29.90:0,30,288	0/0:29,0:29:78.01:0,78,883	0/0:24,0:24:61.28:0,61,372	0/0:16,0:16:43.89:0,44,277	0/0:4,0:6:4.83:0,5,13	1/1:0,19:19:39.13:519,39,0	0/0:19,0:17:46.53:0,47,271	0/0:20,0:20:46.34:0,46,256	0/0:26,0:26:72.56:0,73,407	0/0:21,0:21:56.98:0,57,631	0/0:12,0:12:29.16:0,29,174	0/0:27,0:27:72.78:0,73,419	0/0:18,0:18:40.77:0,41,241	0/0:25,0:25:61.12:0,61,358	0/0:16,0:16:43.54:0,44,245	0/0:15,0:15:39.71:0,40,218	0/0:28,0:22:55.15:0,55,309	0/0:11,0:11:26.12:0,26,147	0/0:21,0:20:52.35:0,52,304	0/0:24,0:24:63.02:0,63,724	0/0:22,0:22:53.44:0,53,606	0/0:20,0:16:36.82:0,37,209	0/0:19,0:18:52.05:0,52,295	0/0:30,0:30:78.45:0,78,459	0/0:10,0:10:26.12:0,26,147
chr10	65165904	.	G	GA	7092.78	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=12.244;DP=519;FS=0.000;HRun=0;HaplotypeScore=63.7103;InbreedingCoeff=0.8855;MQ=71.39;MQ0=47;MQRankSum=-2.005;QD=22.16;ReadPosRankSum=4.981;VQSLOD=6.5743;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,27:19:30.10:479,30,0	1/1:1,5:3:9.03:144,9,0	0/0:37,0:33:96.12:0,96,1240	0/0:34,0:29:84.16:0,84,1087	0/0:19,0:19:54.18:0,54,754	1/1:0,16:6:15.05:240,15,0	1/1:3,10:1:3.01:48,3,0	1/1:4,24:12:33.11:528,33,0	0/0:33,0:33:99:0,99,1362	1/1:1,9:2:6.02:96,6,0	1/1:0,6:5:15.05:239,15,0	1/1:0,21:11:33.11:527,33,0	0/0:23,0:23:69.23:0,69,963	1/1:0,22:10:27.09:432,27,0	1/1:1,17:10:24.08:384,24,0	1/1:1,13:10:27.09:431,27,0	1/1:0,13:13:39.13:623,39,0	1/1:0,12:8:21.07:335,21,0	1/1:1,10:6:18.06:288,18,0	1/1:1,17:7:21.07:336,21,0	1/1:1,28:23:66.23:1055,66,0	1/1:1,9:4:6.02:96,6,0	0/0:21,0:21:57.18:0,57,780	0/0:32,0:32:90.24:0,90,1216	1/1:0,10:5:12.04:192,12,0	1/1:1,9:2:6.02:96,6,0	1/1:0,16:8:21.07:335,21,0	1/1:0,8:4:12.04:192,12,0
chr10	65166429	.	AT	A	470.30	PASS	AC=2;AF=0.037;AN=54;BaseQRankSum=-2.342;DP=651;FS=11.511;HRun=4;HaplotypeScore=72.5926;InbreedingCoeff=0.9191;MQ=53.88;MQ0=67;MQRankSum=-5.323;QD=13.44;ReadPosRankSum=-4.571;VQSLOD=0.6627;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:48:99:0,132,1813	0/0:7,0:7:18.06:0,18,252	./.	0/0:26,0:4:8.81:0,9,83	0/0:25,0:22:54.18:0,54,754	0/0:18,0:18:33.11:0,33,462	0/0:28,0:28:72.24:0,72,1007	1/1:3,32:22:48.14:565,48,0	0/0:23,0:23:63.21:0,63,882	0/0:25,0:22:63.21:0,63,882	0/0:14,0:10:27.09:0,27,378	0/0:22,0:22:51.17:0,51,714	0/0:28,0:28:75.25:0,75,1049	0/0:16,0:16:42.14:0,42,588	0/0:16,0:16:30.10:0,30,420	0/0:25,0:25:63.21:0,63,882	0/0:36,0:36:84.28:0,84,1174	0/0:26,0:26:60.20:0,60,840	0/0:30,0:19:51.17:0,51,709	0/0:24,0:22:51.17:0,51,714	0/0:27,0:27:72.22:0,72,975	0/0:22,0:19:51.17:0,51,713	0/0:14,0:13:27.09:0,27,378	0/0:24,0:24:60.20:0,60,840	0/0:15,0:13:30.10:0,30,420	0/0:18,0:18:54.18:0,54,756	0/0:24,0:23:63.21:0,63,881	0/0:6,0:6:15.05:0,15,210
chr10	65166556	.	AT	A	324.32	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.354;DP=631;FS=12.861;HRun=1;HaplotypeScore=81.7962;InbreedingCoeff=0.9213;MQ=52.70;MQ0=35;MQRankSum=-4.369;QD=16.22;ReadPosRankSum=-2.498;VQSLOD=2.1054;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:34:78.27:0,78,1245	0/0:6,0:6:12.04:0,12,192	0/0:16,0:6:18.04:0,18,232	0/0:18,0:8:21.05:0,21,270	0/0:24,0:24:66.23:0,66,1054	0/0:17,0:15:24.08:0,24,381	0/0:36,0:34:93.30:0,93,1456	1/1:0,20:12:30.10:419,30,0	0/0:18,0:18:51.16:0,51,791	0/0:23,0:22:66.23:0,66,1054	0/0:10,0:9:21.07:0,21,335	0/0:18,0:18:29.91:0,30,478	0/0:25,0:25:66.07:0,66,1018	0/0:20,0:20:53.82:0,54,836	0/0:25,0:22:41.97:0,42,602	0/0:25,0:25:60.20:0,60,958	0/0:32,0:31:72.21:0,72,1101	0/0:21,0:18:42.13:0,42,640	0/0:13,0:11:33.11:0,33,527	0/0:15,0:12:33.11:0,33,520	0/0:50,0:48:99:0,99,1578	0/0:18,0:17:36.12:0,36,574	0/0:23,0:23:63.21:0,63,1006	0/0:42,0:42:99:0,123,1859	0/0:13,0:9:12.04:0,12,192	0/0:27,0:23:69.21:0,69,1075	0/0:34,0:34:78.07:0,78,1227	0/0:7,0:7:21.07:0,21,331
chr10	65167205	.	C	CA	378.61	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.176;DP=572;FS=8.970;HRun=0;HaplotypeScore=79.8337;InbreedingCoeff=0.9111;MQ=54.41;MQ0=38;MQRankSum=-3.405;QD=18.03;ReadPosRankSum=-3.846;VQSLOD=4.1540;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:45:99:0,123,1622	0/0:9,0:7:15.05:0,15,208	0/0:28,0:11:33.11:0,33,442	0/0:20,0:14:37.92:0,38,489	0/0:15,0:15:39.13:0,39,543	0/0:23,0:19:45.15:0,45,626	0/0:12,0:11:30.08:0,30,399	1/1:4,16:15:33.01:473,33,0	0/0:28,0:26:77.84:0,78,1006	0/0:21,0:19:54.18:0,54,752	0/0:13,0:12:21.07:0,21,292	0/0:15,0:13:26.92:0,27,348	0/0:13,0:13:36.08:0,36,480	0/0:8,0:6:18.02:0,18,220	0/0:17,0:14:35.91:0,36,473	0/0:17,0:13:39.10:0,39,510	0/0:31,0:31:78.01:0,78,1037	0/0:22,0:22:60.14:0,60,793	0/0:11,0:11:33.11:0,33,457	0/0:18,0:17:42.06:0,42,563	0/0:49,0:48:99:0,132,1753	0/0:22,0:20:48.04:0,48,603	0/0:28,0:28:72.11:0,72,975	0/0:29,0:29:80.85:0,81,1071	0/0:23,0:20:54.18:0,54,739	0/0:19,0:17:51.08:0,51,654	0/0:8,0:7:18.06:0,18,251	0/0:4,0:3:8.99:0,9,104
chr10	65167777	.	CGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA	C	3199.37	PASS	AC=24;AF=0.600;AN=40;BaseQRankSum=3.666;DP=403;FS=18.485;HRun=0;HaplotypeScore=245.3660;InbreedingCoeff=0.6322;MQ=38.77;MQ0=80;MQRankSum=-3.067;QD=16.49;ReadPosRankSum=1.174;VQSLOD=1.2395;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:26,2:22:5.84:396,6,0	./.	0/0:21,0:6:2.87:0,3,281	0/0:28,0:3:6.02:0,6,117	0/0:7,0:6:12.04:0,12,1128	1/1:18,1:19:3.01:247,3,0	1/1:25,0:20:2.98:37,3,0	0/0:48,0:39:75.68:0,76,1506	0/0:34,0:30:59.44:0,59,5279	./.	./.	1/1:17,1:16:6.02:470,6,0	0/0:9,0:7:9.03:0,9,844	1/1:8,2:9:9.03:531,9,0	1/1:23,2:22:6.02:494,6,0	1/1:15,1:12:6.02:284,6,0	1/1:10,1:12:6.02:471,6,0	1/1:6,0:6:2.99:23,3,0	1/1:13,1:11:9:308,9,0	./.	1/1:12,0:9:3.01:51,3,0	./.	0/0:11,0:10:15.05:0,15,924	0/0:14,0:16:21.07:0,21,1982	./.	./.	1/1:8,0:6:3.01:38,3,0	./.
chr10	65167831	.	CG	C	530.79	PASS	AB=0.934;AC=33;AF=0.786;AN=42;BaseQRankSum=5.519;DP=277;FS=0.000;HRun=11;HaplotypeScore=183.1145;InbreedingCoeff=0.3449;MQ=70.05;MQ0=25;MQRankSum=-5.165;QD=2.03;ReadPosRankSum=5.429;VQSLOD=-0.1991;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,0:9:10.46:28,10,0	./.	0/1:44,2:20:11.86:12,0,178	0/1:48,2:15:9.54:10,0,142	./.	1/1:11,0:9:13.60:38,14,0	1/1:6,0:6:7.71:22,8,0	1/1:9,0:11:16.29:47,16,0	0/1:20,2:17:9.36:98,0,9	1/1:1,0:1:2.04:6,2,0	./.	1/1:15,0:15:9.47:50,9,0	0/0:3,0:3:6.46:0,6,51	1/1:17,0:17:23.41:63,23,0	1/1:12,0:11:19.52:56,20,0	1/1:9,0:9:16.11:44,16,0	1/1:8,0:7:14.26:41,14,0	1/1:4,0:4:4.96:14,5,0	1/1:13,0:13:9.35:41,9,0	./.	1/1:4,0:3:3.63:10,4,0	./.	0/0:1,0:1:0:0,0,0	0/0:7,0:7:8.79:0,9,63	./.	1/1:8,0:8:16.30:47,16,0	1/1:8,0:7:9.75:29,10,0	./.
chr10	65167835	.	GGGGGGGGC	G	5647.99	PASS	AB=0.770;AC=29;AF=0.659;AN=44;BaseQRankSum=9.898;DP=278;FS=2.811;HRun=0;HaplotypeScore=190.5830;InbreedingCoeff=0.5732;MQ=72.01;MQ0=18;MQRankSum=-7.914;QD=34.44;ReadPosRankSum=9.389;VQSLOD=3.9647;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:3,6:9:23.78:378,24,0	./.	0/0:45,0:22:43.83:0,44,963	0/0:46,0:15:12.93:0,13,566	0/0:3,0:2:6.02:0,6,170	1/1:6,5:9:20.80:394,21,0	1/1:1,5:6:11.91:226,12,0	0/1:12,3:12:99:185,0,301	0/1:19,4:17:99:239,0,1241	1/1:0,1:1:3.01:74,3,0	./.	1/1:7,9:16:9.50:659,9,0	0/0:4,0:4:11.83:0,12,378	1/1:8,10:17:43.42:718,43,0	1/1:4,8:11:32.67:565,33,0	0/1:4,6:10:54.94:434,0,55	1/1:5,3:7:20.53:281,21,0	1/1:2,2:4:11.77:157,12,0	1/1:7,4:11:13.29:356,13,0	./.	1/1:1,3:3:6.02:146,6,0	./.	0/0:3,0:3:9.03:0,9,306	0/0:10,0:10:20.82:0,21,698	./.	1/1:0,8:8:24.08:588,24,0	1/1:5,3:7:17.56:249,18,0	./.
chr10	65167837	.	GGGGGGC	G	5885.62	PASS	AB=0.923;AC=29;AF=0.659;AN=44;BaseQRankSum=8.654;DP=282;FS=1.251;HRun=0;HaplotypeScore=182.1586;InbreedingCoeff=0.5410;MQ=71.93;MQ0=17;MQRankSum=-7.837;QD=33.83;ReadPosRankSum=9.018;VQSLOD=4.0989;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,3:9:23.44:358,23,0	./.	0/0:42,0:23:2.89:0,3,741	0/0:43,0:13:9.75:0,10,485	0/0:3,0:2:6.02:0,6,113	1/1:6,6:9:21.07:379,21,0	1/1:5,1:6:12.04:212,12,0	0/1:21,0:18:99:141,0,274	0/1:25,0:19:99:141,0,945	1/1:1,0:1:3.01:46,3,0	./.	1/1:12,5:16:48.03:784,48,0	0/0:4,0:4:11.71:0,12,301	1/1:11,7:17:45.15:765,45,0	1/1:9,4:12:33.11:598,33,0	0/1:7,3:10:35.68:451,0,36	1/1:3,5:7:21.07:422,21,0	1/1:2,2:4:12.04:214,12,0	1/1:5,5:11:30.10:569,30,0	./.	1/1:3,0:3:6.02:95,6,0	./.	0/0:3,0:3:9.03:0,9,231	0/0:9,0:9:17.76:0,18,495	./.	1/1:8,0:8:24.08:372,24,0	1/1:3,5:7:17.82:338,18,0	./.
chr10	65167853	.	G	GA	4783.78	PASS	AB=0.663;AC=19;AF=0.432;AN=44;BaseQRankSum=8.373;DP=304;FS=93.330;HRun=0;HaplotypeScore=199.5482;InbreedingCoeff=-0.2587;MQ=57.89;MQ0=20;MQRankSum=-5.658;QD=20.18;ReadPosRankSum=3.164;VQSLOD=0.9718;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:3,11:13:50.43:384,0,50	./.	0/0:17,0:14:13.77:0,14,292	0/0:20,0:8:10.15:0,10,156	0/0:3,0:2:6.02:0,6,84	0/1:7,7:11:56.45:286,0,56	0/1:3,7:9:20.74:228,0,21	0/1:23,13:33:99:518,0,700	0/1:30,6:26:99:194,0,744	1/1:0,3:3:9.03:141,9,0	./.	0/1:8,9:17:99:378,0,200	0/0:7,0:7:18.06:0,18,238	0/1:8,10:17:99:402,0,163	0/1:5,13:17:99:495,0,151	0/1:4,10:14:99:417,0,125	0/1:6,5:10:99:220,0,137	0/1:4,2:6:68.62:120,0,69	0/1:6,8:14:99:292,0,173	./.	1/1:1,5:6:9.03:134,9,0	./.	0/0:6,0:6:12.04:0,12,167	0/0:12,0:12:26.32:0,26,353	./.	1/1:0,10:10:30.10:459,30,0	0/1:5,4:7:99:116,0,107	./.
chr10	65167876	.	TA	T	4752.33	PASS	AB=0.629;AC=27;AF=0.540;AN=50;BaseQRankSum=10.928;DP=340;FS=26.042;HRun=3;HaplotypeScore=167.9351;InbreedingCoeff=0.0168;MQ=35.68;MQ0=40;MQRankSum=-8.244;QD=18.00;ReadPosRankSum=4.490;VQSLOD=2.9662;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,17:18:32.05:498,32,0	./.	0/0:15,0:5:12.04:0,12,164	0/0:19,0:5:14.82:0,15,157	0/0:9,0:8:20.99:0,21,255	0/1:6,7:10:18.94:235,0,19	1/1:3,11:13:27.08:330,27,0	0/1:15,13:22:99:281,0,294	0/1:35,12:34:99:237,0,866	1/1:1,3:3:9.03:111,9,0	./.	0/1:5,13:17:15.86:436,0,16	0/0:8,0:8:24.03:0,24,304	0/1:6,11:16:86.86:364,0,87	0/1:3,14:16:30.82:433,0,31	0/1:4,12:16:96.10:396,0,96	0/1:4,7:10:34.96:232,0,35	0/1:2,5:7:62.54:164,0,63	0/1:9,12:15:99:226,0,139	1/1:0,1:1:3.01:37,3,0	1/1:1,7:8:14.99:167,15,0	1/1:0,1:1:3.01:37,3,0	0/0:7,0:6:11.98:0,12,131	0/0:18,0:18:48.15:0,48,672	1/1:0,1:1:3.01:35,3,0	1/1:0,10:10:30.09:370,30,0	0/1:5,6:9:64.96:164,0,65	./.
chr10	65168262	.	C	CT	3116.32	PASS	AB=0.614;AC=11;AF=0.423;AN=26;BaseQRankSum=2.256;DP=307;FS=1.292;HRun=1;HaplotypeScore=43.0612;InbreedingCoeff=0.5213;MQ=38.06;MQ0=87;MQRankSum=-5.178;QD=19.98;ReadPosRankSum=-2.489;VQSLOD=3.0363;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,11:1:3.01:48,3,0	./.	0/0:10,0:3:9.03:0,9,123	0/0:14,0:3:6.02:0,6,84	0/0:13,0:13:32.95:0,33,457	./.	./.	1/1:4,67:52:99:2266,147,0	0/1:20,34:39:99:773,0,364	1/1:0,6:1:3.01:48,3,0	./.	./.	0/0:25,0:25:60.20:0,60,833	./.	./.	0/0:2,0:1:3.01:0,3,42	./.	./.	./.	1/1:0,6:1:3.01:48,3,0	./.	./.	0/0:16,0:14:36.12:0,36,498	0/0:26,0:26:63.21:0,63,876	./.	1/1:0,8:1:3.01:48,3,0	./.	./.
chr10	65168507	.	C	CATAATGTAT	980.31	PASS	AB=0.977;AC=5;AF=0.100;AN=50;BaseQRankSum=7.292;DP=621;FS=20.695;HRun=0;HaplotypeScore=197.3656;InbreedingCoeff=0.1987;MQ=41.61;MQ0=50;MQRankSum=-3.703;QD=7.10;ReadPosRankSum=0.954;VQSLOD=1.4640;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:37:53.54:0,54,1613	./.	0/0:36,0:5:11.71:0,12,251	0/1:41,0:6:2:2,0,184	0/0:30,0:30:51.16:0,51,1534	0/0:13,0:10:17.89:0,18,568	0/0:10,0:10:5.54:0,6,189	0/0:81,0:60:99:0,156,3898	0/1:86,7:76:99:1053,0,2834	0/0:7,0:6:18.06:0,18,569	1/1:1,0:1:0.47:1,0,0	0/0:23,0:17:41.93:0,42,1325	0/0:33,0:33:78.27:0,78,2405	0/0:17,0:15:20.86:0,21,663	0/0:26,0:20:36.12:0,36,1137	0/0:30,0:23:54.19:0,54,1704	0/0:5,0:3:3.01:0,3,95	0/0:2,0:1:3.01:0,3,95	0/0:15,0:15:33.08:0,33,821	0/0:2,0:2:2.80:0,3,94	0/0:13,0:11:14.20:0,14,473	./.	0/0:29,0:29:54.16:0,54,1516	0/0:37,0:37:69.24:0,69,2115	0/1:3,0:2:0:0,0,0	0/0:14,0:11:33.01:0,33,879	0/0:12,0:11:21.07:0,21,624	./.
chr10	65168567	.	T	TGC	1375.58	PASS	AC=2;AF=0.037;AN=54;BaseQRankSum=-8.881;DP=654;FS=26.759;HRun=0;HaplotypeScore=150.8964;InbreedingCoeff=0.5360;MQ=35.84;MQ0=162;MQRankSum=-4.483;QD=12.74;ReadPosRankSum=-3.995;VQSLOD=1.2867;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:28:18.05:0,18,289	0/0:4,0:3:9:0,9,120	0/0:22,0:1:3.01:0,3,49	0/0:29,0:4:9.02:0,9,95	0/0:28,0:28:72.23:0,72,1143	0/0:12,0:12:9.03:0,9,146	0/0:19,0:14:9.03:0,9,147	1/1:31,76:38:62.55:1469,63,0	0/0:31,0:27:5.95:0,6,67	0/0:21,0:17:42.09:0,42,642	0/0:6,0:4:0:0,0,0	0/0:23,0:19:17.86:0,18,201	0/0:28,0:28:60.17:0,60,927	0/0:11,0:9:3.01:0,3,49	0/0:26,0:20:21.07:0,21,340	0/0:23,0:21:24.01:0,24,358	0/0:10,0:6:12.04:0,12,194	0/0:5,0:5:15.05:0,15,244	0/0:24,0:12:29.96:0,30,388	0/0:12,0:7:9.03:0,9,147	0/0:45,0:41:63.21:0,63,1009	0/0:6,0:4:12.04:0,12,192	0/0:24,0:23:39.56:0,40,604	0/0:31,0:32:69.22:0,69,1094	0/0:14,0:10:21.05:0,21,316	0/0:21,0:18:48.08:0,48,723	0/0:23,0:20:24.06:0,24,376	./.
chr10	65168578	.	T	TCATA	8414.95	PASS	AB=0.709;AC=34;AF=0.654;AN=52;BaseQRankSum=-3.590;DP=656;FS=2.546;HRun=0;HaplotypeScore=137.6724;InbreedingCoeff=0.6574;MQ=36.91;MQ0=153;MQRankSum=-2.881;QD=21.58;ReadPosRankSum=0.005;VQSLOD=4.8420;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:23,15:29:36.07:804,36,0	1/1:1,4:4:9.03:215,9,0	0/0:28,0:5:9.03:0,9,124	0/0:34,0:9:15.04:0,15,173	0/0:31,0:32:72.08:0,72,926	1/1:3,8:11:9.03:214,9,0	1/1:18,6:18:9.03:213,9,0	0/0:80,0:21:5.96:0,6,44	0/1:42,0:31:4.03:42,0,4	1/1:3,17:16:33.06:734,33,0	0/1:2,5:5:0:0,0,0	1/1:7,12:15:8.71:214,9,0	0/0:27,0:27:24.06:0,24,350	./.	1/1:10,19:21:24.08:570,24,0	1/1:10,12:20:27.09:643,27,0	1/1:4,7:7:15.05:357,15,0	0/1:2,3:6:35.45:202,0,35	1/1:13,6:8:18.06:429,18,0	0/1:8,9:10:74.84:268,0,75	1/1:16,32:47:13.35:1579,13,0	1/1:1,7:6:12.04:286,12,0	0/0:21,0:20:35.87:0,36,534	0/0:31,0:31:39.11:0,39,593	1/1:5,10:12:21.07:463,21,0	1/1:10,12:18:36.01:753,36,0	1/1:8,14:20:18.06:428,18,0	./.
chr10	65168945	.	TA	T	160.47	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=0.302;DP=595;FS=9.093;HRun=1;HaplotypeScore=101.8133;InbreedingCoeff=0.9652;MQ=62.39;MQ0=52;MQRankSum=-4.089;QD=16.05;ReadPosRankSum=0.094;VQSLOD=2.9488;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:81.25:0,81,1267	0/0:15,0:14:42.14:0,42,670	0/0:26,0:25:63.18:0,63,951	0/0:16,0:16:44.50:0,44,617	0/0:24,0:24:60.20:0,60,955	0/0:14,0:11:24.08:0,24,383	0/0:21,0:17:48.16:0,48,743	0/0:32,1:28:36.38:0,36,1121	1/1:0,10:7:18.06:251,18,0	0/0:22,0:18:54.18:0,54,863	0/0:12,0:10:21.07:0,21,322	0/0:17,0:14:36.12:0,36,573	0/0:21,0:21:63.20:0,63,965	0/0:21,0:18:39.13:0,39,622	0/0:21,0:17:42.14:0,42,670	0/0:22,0:17:39.13:0,39,622	0/0:26,0:25:69.11:0,69,1007	0/0:13,0:12:36.12:0,36,557	0/0:29,0:25:69.20:0,69,1011	0/0:28,0:24:63.21:0,63,1004	0/0:35,0:33:87.30:0,87,1378	0/0:13,0:11:26.85:0,27,431	0/0:26,0:26:72.14:0,72,1069	0/0:21,0:21:63.21:0,63,1004	0/0:13,0:9:15.05:0,15,230	0/0:28,0:27:84.28:0,84,1315	0/0:27,0:26:69.24:0,69,1102	0/0:11,0:7:21.07:0,21,331
chr10	65174261	.	G	GA	692.38	PASS	AC=10;AF=0.417;AN=24;BaseQRankSum=4.751;DP=206;FS=52.222;HRun=1;HaplotypeScore=34.9297;InbreedingCoeff=0.8412;MQ=34.11;MQ0=14;MQRankSum=-5.548;QD=20.36;ReadPosRankSum=0.307;VQSLOD=0.4603;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	1/1:0,2:2:6.02:96,6,0	0/0:24,1:8:24.08:0,24,334	0/0:26,1:8:24.08:0,24,335	0/0:23,0:23:54.18:0,54,754	./.	./.	./.	0/0:23,0:23:66.22:0,66,921	./.	./.	./.	0/0:19,0:18:51.17:0,51,712	./.	./.	./.	./.	./.	./.	1/1:2,15:8:21.07:335,21,0	./.	1/1:1,3:2:3.01:48,3,0	0/0:19,0:18:42.14:0,42,582	0/0:16,0:15:42.14:0,42,587	1/1:0,10:7:18.06:287,18,0	./.	./.	1/1:0,1:1:3.01:48,3,0
chr10	65175039	.	GAAC	G	572.72	PASS	AC=12;AF=0.667;AN=18;BaseQRankSum=1.232;DP=780;FS=0.000;HRun=0;HaplotypeScore=18.4939;MQ=7.67;MQ0=650;MQRankSum=-1.779;QD=5.45;ReadPosRankSum=-0.301;VQSLOD=1.1942;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	1/1:8,2:2:3.01:48,3,0	./.	./.	0/0:27,0:7:15.05:0,15,272	./.	./.	./.	./.	./.	1/1:5,6:7:12.04:193,12,0	./.	0/0:39,0:2:6.02:0,6,103	./.	1/1:27,2:1:3.01:48,3,0	./.	./.	./.	./.	1/1:6,9:11:12.04:193,12,0	./.	1/1:19,5:6:3.01:48,3,0	0/0:18,0:5:12.04:0,12,264	./.	1/1:9,7:8:9.03:144,9,0	./.	./.	./.
chr10	65175374	.	AAAAG	A	4827.37	PASS	AC=40;AF=0.769;AN=52;BaseQRankSum=5.750;DP=278;FS=6.471;HRun=0;HaplotypeScore=49.1160;InbreedingCoeff=0.8367;MQ=49.90;MQ0=9;MQRankSum=0.138;QD=23.66;ReadPosRankSum=3.511;VQSLOD=3.5920;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,24:22:39.13:602,39,0	1/1:0,4:4:6.02:93,6,0	./.	0/0:10,0:3:3:0,3,26	0/0:15,0:14:27.08:0,27,537	1/1:0,5:5:12.04:185,12,0	./.	1/1:13,1:9:20.95:168,21,0	0/0:14,0:14:36.09:0,36,437	1/1:0,11:10:30.08:441,30,0	1/1:2,10:10:26.94:333,27,0	1/1:0,7:7:15.05:232,15,0	0/0:10,0:9:18.06:0,18,351	1/1:0,5:5:9.03:139,9,0	1/1:1,7:6:9.03:139,9,0	1/1:0,7:7:6.02:93,6,0	1/1:4,13:15:21.07:312,21,0	1/1:4,10:9:12.04:175,12,0	1/1:2,4:3:9:94,9,0	1/1:0,9:9:17.99:225,18,0	1/1:0,9:7:9.03:139,9,0	1/1:0,10:8:23.95:290,24,0	0/0:9,0:9:20.97:0,21,359	0/0:4,0:4:12.04:0,12,221	1/1:0,14:11:30.10:462,30,0	1/1:0,12:10:26.94:337,27,0	1/1:0,6:6:12.04:185,12,0	1/1:1,8:9:12.04:185,12,0
chr10	65175604	.	GTGTGTGTC	G	643.82	PASS	AB=1.000;AC=20;AF=0.435;AN=46;BaseQRankSum=3.496;DP=372;FS=3.605;HRun=0;HaplotypeScore=70.3614;InbreedingCoeff=0.2389;MQ=41.44;MQ0=62;MQRankSum=-5.170;QD=3.52;ReadPosRankSum=-1.551;VQSLOD=1.4253;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:24:14.89:110,15,0	./.	0/0:20,0:3:8.50:0,9,65	0/0:26,0:3:2.18:0,2,51	0/0:6,0:6:9.03:0,9,332	1/1:10,0:7:2.92:17,3,0	./.	1/1:28,0:16:31.55:222,32,0	0/0:19,0:14:7.32:0,7,196	1/1:5,0:2:5.88:36,6,0	./.	./.	0/0:13,0:11:23.99:0,24,657	0/1:11,0:10:52.17:52,0,177	1/1:14,0:9:3:25,3,0	1/1:15,1:14:8.98:72,9,0	1/1:9,0:7:4.08:33,4,0	0/1:10,0:6:30.94:31,0,59	0/0:5,0:2:6.02:0,6,164	0/0:5,0:5:0:0,0,0	0/0:13,0:10:12.04:0,12,286	./.	0/0:7,0:7:9.02:0,9,179	0/0:36,0:32:46.06:0,46,1593	0/1:12,0:9:81.38:81,0,181	0/1:14,0:7:45.52:46,0,113	0/1:18,0:12:11.97:37,0,12	0/1:7,0:4:13.98:37,0,14
chr10	65175610	.	GTC	G	1031.86	PASS	AB=1.000;AC=26;AF=0.565;AN=46;BaseQRankSum=4.266;DP=326;FS=4.447;HRun=0;HaplotypeScore=48.7556;InbreedingCoeff=0.4578;MQ=43.19;MQ0=58;MQRankSum=-5.894;QD=5.96;ReadPosRankSum=-1.512;VQSLOD=2.2600;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:16:17.82:135,18,0	./.	0/0:22,0:3:8.60:0,9,66	0/0:27,0:3:2.18:0,2,51	0/0:6,0:6:6.02:0,6,116	1/1:6,0:4:2.92:17,3,0	./.	1/1:24,10:18:42.01:287,42,0	0/0:19,0:14:9.83:0,10,164	1/1:5,0:2:5.88:36,6,0	./.	./.	0/0:12,0:10:23.96:0,24,277	0/1:11,0:10:10.97:94,0,11	1/1:14,0:9:8.83:74,9,0	1/1:10,0:8:8.98:72,9,0	1/1:8,0:6:11.78:76,12,0	1/1:8,0:5:8.87:58,9,0	0/1:6,0:2:7.05:16,0,7	./.	1/1:11,0:9:11.89:83,12,0	0/0:5,0:1:0:0,0,0	0/0:8,0:8:11.89:0,12,90	0/0:31,0:29:34.32:0,34,632	0/1:8,0:5:25.85:29,0,26	0/1:11,0:5:18.02:49,0,18	1/1:11,0:7:12.33:82,12,0	1/1:9,0:6:11.92:88,12,0
chr10	65176433	.	G	GA	1405.69	PASS	AB=0.837;AC=31;AF=0.574;AN=54;BaseQRankSum=8.109;DP=279;FS=6.530;HRun=1;HaplotypeScore=69.5081;InbreedingCoeff=0.2210;MQ=45.47;MQ0=7;MQRankSum=-7.024;QD=8.79;ReadPosRankSum=-1.982;VQSLOD=0.1882;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:5,5:10:17.37:139,0,17	0/0:4,1:3:3.85:0,4,22	0/0:15,0:8:22.31:0,22,267	0/0:16,0:11:16.58:0,17,315	0/0:14,0:14:33.06:0,33,408	1/1:5,3:8:0.40:112,0,0	0/1:8,0:8:16.68:37,0,17	1/1:3,1:1:3:25,3,0	0/1:30,6:38:99:317,0,456	1/1:3,3:4:9:91,9,0	1/1:1,2:1:2.80:13,3,0	0/1:6,0:6:14.29:17,0,14	0/0:20,0:20:57.17:0,57,726	1/1:7,1:7:9.21:112,9,0	1/1:6,4:9:3.95:166,4,0	1/1:4,2:6:7.83:89,8,0	0/1:11,1:12:15.28:163,0,15	0/1:2,3:5:27.63:34,0,28	1/1:8,0:4:11.94:94,12,0	./.	1/1:5,8:14:3.26:24,3,0	0/0:3,0:2:0.89:0,1,2	0/0:12,0:12:27.05:0,27,332	0/0:32,0:32:93.26:0,93,1171	1/1:3,0:3:2.97:20,3,0	1/1:3,0:2:5.95:42,6,0	0/1:4,1:4:25.95:50,0,26	1/1:2,0:2:5.81:32,6,0
chr10	65176441	.	GAGGCAGGCAGGCAGGC	G	935.04	PASS	AB=0.912;AC=3;AF=0.068;AN=44;BaseQRankSum=1.259;DP=255;FS=9.124;HRun=0;HaplotypeScore=122.9850;InbreedingCoeff=-0.0841;MQ=42.33;MQ0=9;MQRankSum=-1.765;QD=17.00;ReadPosRankSum=3.668;VQSLOD=1.3925;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:6.02:0,6,228	0/0:2,0:1:3.01:0,3,139	0/0:12,0:7:1.25:0,1,3	0/0:9,0:6:2.97:0,3,20	0/0:14,0:14:9.02:0,9,292	0/1:7,0:7:13.56:14,0,220	0/1:9,0:9:29.69:30,0,681	0/0:12,0:4:12.04:0,12,381	0/1:25,14:38:99:984,0,156	./.	0/0:3,0:1:2.50:0,2,9	0/0:5,0:5:9.03:0,9,393	0/0:20,0:20:27.07:0,27,1164	0/0:5,0:4:5.99:0,6,141	0/0:7,0:7:6.02:0,6,270	0/0:6,0:6:6.02:0,6,261	0/0:12,0:12:16.39:0,16,437	./.	./.	0/0:1,0:1:3.01:0,3,53	./.	./.	0/0:10,0:9:9.03:0,9,667	0/0:31,0:32:48.14:0,48,2736	./.	0/0:4,0:3:4.26:0,4,127	0/0:5,0:4:9.03:0,9,422	0/0:2,0:2:6.02:0,6,276
chr10	65176946	.	C	CA	1861.29	PASS	AB=0.931;AC=35;AF=0.729;AN=48;BaseQRankSum=-0.665;DP=228;FS=7.072;HRun=1;HaplotypeScore=49.5803;InbreedingCoeff=0.3379;MQ=40.84;MQ0=27;MQRankSum=4.669;QD=9.59;ReadPosRankSum=-0.019;VQSLOD=0.8236;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,3:5:2.22:47,2,0	1/1:1,1:1:3.01:45,3,0	./.	./.	./.	1/1:9,2:9:14.34:122,14,0	0/1:14,3:14:20.14:243,0,20	0/1:32,0:14:6.57:7,0,26	0/0:11,0:11:20.28:0,20,254	1/1:11,1:8:18.58:197,19,0	0/0:5,0:5:2.73:0,3,24	1/1:3,1:3:1.66:42,2,0	./.	1/1:8,0:10:9.44:102,9,0	1/1:3,1:4:3.39:44,3,0	1/1:4,3:6:7.87:120,8,0	1/1:8,8:14:15.25:260,15,0	1/1:4,1:3:2.85:41,3,0	0/1:5,0:4:3.21:9,0,3	0/1:1,0:2:0:0,0,0	1/1:24,4:21:26.48:292,26,0	1/1:4,1:5:5.53:56,6,0	0/0:3,0:2:3.01:0,3,42	0/0:12,0:10:21.04:0,21,248	1/1:6,1:6:11.41:123,11,0	1/1:6,0:4:5.50:19,6,0	1/1:1,3:3:9.03:121,9,0	0/1:6,2:7:0.05:113,0,0
chr10	65176949	.	CCA	C	578.56	PASS	AB=0.845;AC=17;AF=0.354;AN=48;BaseQRankSum=3.440;DP=203;FS=11.019;HRun=0;HaplotypeScore=41.4888;InbreedingCoeff=-0.1831;MQ=39.65;MQ0=24;MQRankSum=1.853;QD=5.08;ReadPosRankSum=-0.119;VQSLOD=0.4733;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:3,0:3:0.47:0,0,2	1/1:2,0:1:3.01:35,3,0	./.	./.	./.	0/1:6,2:7:24.85:70,0,25	0/1:15,2:13:37.40:37,0,78	0/0:35,0:13:27.17:0,27,239	0/0:9,0:9:20.64:0,21,218	0/1:7,1:5:14.35:55,0,14	0/0:5,0:5:3.01:0,3,56	1/1:3,1:3:4.40:45,4,0	0/0:2,0:1:3.01:0,3,37	0/1:6,0:6:4.80:5,0,34	0/1:4,1:4:27.86:36,0,28	0/1:4,3:6:23.50:90,0,23	0/1:12,2:12:24.95:69,0,25	0/1:3,1:3:10.61:29,0,11	0/0:5,0:4:3.66:0,4,47	./.	0/1:22,2:17:36.59:61,0,37	0/1:3,1:4:19.08:31,0,19	0/0:3,0:2:2.53:0,3,26	0/0:12,0:10:23.79:0,24,336	0/0:7,0:5:5.27:0,5,46	0/0:4,0:3:3:0,3,25	1/1:1,3:3:9.02:101,9,0	0/1:5,2:7:42.69:55,0,43
chr10	65178169	.	TACC	T	5642.21	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=4.694;DP=588;FS=9.576;HRun=0;HaplotypeScore=115.3410;InbreedingCoeff=0.7919;MQ=49.34;MQ0=35;MQRankSum=-2.605;QD=13.63;ReadPosRankSum=1.976;VQSLOD=3.9213;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,5:22:24.72:465,25,0	1/1:4,0:4:10.23:98,10,0	0/0:38,0:14:5.16:0,5,98	0/0:38,0:10:11.37:0,11,122	0/0:9,0:9:6.02:0,6,111	1/1:19,2:19:29.98:314,30,0	1/1:17,7:22:36.01:421,36,0	1/1:19,0:15:12.02:139,12,0	0/0:22,0:21:31.92:0,32,577	1/1:12,12:23:20.57:262,21,0	1/1:6,6:12:3.01:37,3,0	1/1:21,11:34:65.63:712,66,0	0/0:18,0:17:30.10:0,30,580	1/1:25,8:32:34.25:459,34,0	1/1:15,4:19:27.08:340,27,0	1/1:11,2:11:5.18:178,5,0	1/1:15,5:19:30.08:368,30,0	1/1:7,1:8:2:170,2,0	1/1:12,5:15:16.06:138,16,0	1/1:5,4:9:6.02:79,6,0	1/1:53,1:46:35.93:397,36,0	1/1:16,0:16:3.01:35,3,0	0/0:11,0:9:18.02:0,18,271	0/0:38,0:36:70.77:0,71,1320	1/1:11,0:11:15.02:154,15,0	1/1:31,2:29:47.34:508,47,0	1/1:9,4:13:15.05:209,15,0	1/1:1,4:5:12.04:158,12,0
chr10	65178186	.	C	CCAT	3700.71	PASS	AB=1.000;AC=38;AF=0.679;AN=56;BaseQRankSum=4.266;DP=486;FS=18.117;HRun=0;HaplotypeScore=110.5045;InbreedingCoeff=0.5462;MQ=42.65;MQ0=59;MQRankSum=-1.585;QD=11.39;ReadPosRankSum=2.008;VQSLOD=2.1929;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:19:27.14:242,27,0	1/1:4,0:4:8.02:65,8,0	0/0:27,0:6:0.10:0,0,71	0/0:40,0:5:11.37:0,11,116	0/0:6,0:5:6.02:0,6,98	1/1:13,0:13:25.37:237,25,0	1/1:20,0:16:35.38:269,35,0	0/1:15,0:9:31.34:118,0,31	0/0:23,0:21:49.05:0,49,621	1/1:14,0:13:23.46:229,23,0	1/1:8,0:7:3.01:37,3,0	1/1:27,0:27:48.04:396,48,0	0/0:16,0:15:33.08:0,33,514	1/1:23,0:23:26.09:320,26,0	1/1:12,1:13:25.43:296,25,0	0/1:17,0:14:43.99:110,0,44	0/1:19,0:17:1.87:213,0,2	1/1:8,0:8:17.28:100,17,0	0/1:10,0:7:24.78:87,0,25	1/1:6,0:6:6.33:36,6,0	1/1:47,0:34:34.52:248,35,0	1/1:1,8:9:3.01:34,3,0	0/0:10,0:7:18.02:0,18,239	0/0:39,0:35:93.46:0,93,1325	1/1:6,0:6:14.73:98,15,0	1/1:27,0:22:20.56:303,21,0	1/1:8,0:8:14.56:114,15,0	1/1:6,0:5:12.03:149,12,0
chr10	65178192	.	TCACCACTAC	T	5333.07	PASS	AB=0.984;AC=40;AF=0.769;AN=52;BaseQRankSum=6.143;DP=454;FS=23.845;HRun=0;HaplotypeScore=126.1834;InbreedingCoeff=0.5281;MQ=41.31;MQ0=62;MQRankSum=-4.129;QD=16.41;ReadPosRankSum=-0.915;VQSLOD=2.2138;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:21,2:17:36.70:360,37,0	1/1:4,0:4:11.94:99,12,0	0/1:27,0:4:0:0,0,0	./.	0/0:5,0:4:2.97:0,3,20	1/1:9,1:10:23.79:253,24,0	1/1:20,0:15:29.96:275,30,0	0/1:14,0:8:21.80:68,0,22	0/0:23,0:21:18.31:0,18,712	1/1:14,0:13:18.26:216,18,0	./.	1/1:21,5:26:60.43:788,60,0	0/0:16,0:14:36.09:0,36,1094	1/1:17,4:20:39.70:564,40,0	1/1:9,4:13:26.36:413,26,0	1/1:11,2:10:23.79:319,24,0	0/1:14,1:13:7.29:269,0,7	1/1:8,0:8:8.50:64,8,0	1/1:10,0:7:12.04:193,12,0	1/1:5,0:5:5.92:69,6,0	1/1:41,0:28:10.87:181,11,0	1/1:7,0:7:2.60:10,3,0	0/1:8,0:5:19.92:20,0,132	0/0:40,0:36:76.40:0,76,1753	1/1:6,0:6:13.74:141,14,0	1/1:24,1:20:44.98:500,45,0	1/1:6,2:8:16.68:200,17,0	1/1:3,4:5:12.04:333,12,0
chr10	65178196	.	CACT	C	2881.37	PASS	AB=1.000;AC=40;AF=0.800;AN=50;BaseQRankSum=6.412;DP=434;FS=30.415;HRun=0;HaplotypeScore=96.8565;InbreedingCoeff=0.5569;MQ=38.53;MQ0=65;MQRankSum=-2.674;QD=10.11;ReadPosRankSum=-1.503;VQSLOD=0.7741;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:13:35.70:259,36,0	1/1:4,0:4:7.93:64,8,0	./.	./.	0/0:4,0:3:2.97:0,3,20	1/1:9,1:10:3.93:152,4,0	1/1:19,0:14:28.33:201,28,0	0/1:12,0:5:30.44:30,0,34	0/0:21,1:20:18.76:0,19,545	1/1:12,0:11:22.14:133,22,0	./.	1/1:24,0:24:57.20:396,57,0	0/0:16,0:14:36.08:0,36,662	1/1:21,0:20:21.12:252,21,0	1/1:12,0:12:26.66:192,27,0	1/1:18,0:15:25.40:173,25,0	1/1:13,1:12:11.89:208,12,0	1/1:6,0:6:7.54:52,8,0	1/1:8,0:5:11.96:95,12,0	1/1:4,1:5:6.43:46,6,0	1/1:39,0:26:10.69:146,11,0	1/1:6,0:6:2.97:20,3,0	0/1:10,0:5:20.25:20,0,69	0/0:39,0:36:14.39:0,14,1090	1/1:5,0:5:11.46:67,11,0	1/1:22,1:19:34.80:285,35,0	1/1:8,0:8:20.84:153,21,0	1/1:7,0:5:11.96:94,12,0
chr10	65178234	.	CCAT	C	154.08	PASS	AB=0.971;AC=15;AF=0.288;AN=52;BaseQRankSum=1.395;DP=470;FS=2.482;HRun=0;HaplotypeScore=101.7523;InbreedingCoeff=-0.2965;MQ=33.20;MQ0=77;MQRankSum=-2.122;QD=0.58;ReadPosRankSum=-2.773;VQSLOD=1.6085;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:20,0:12:10.99:11,0,15	1/1:1,0:1:2.92:17,3,0	0/1:51,0:6:9.20:9,0,167	0/0:51,0:4:7.31:0,7,59	0/0:7,0:5:7.27:0,7,124	0/0:10,3:12:10.40:0,10,255	0/0:27,1:15:13.40:0,13,81	0/1:22,0:12:22.44:65,0,22	0/0:16,0:13:26.17:0,26,472	0/1:20,0:14:20.27:20,0,190	0/0:5,0:5:3.32:0,3,22	0/1:15,0:15:37.27:37,0,74	0/0:14,0:12:30.05:0,30,489	0/1:14,0:14:19.22:19,0,122	0/1:13,0:12:10:10,0,21	0/0:16,0:13:0.95:0,1,122	0/1:10,1:10:38.02:38,0,110	0/1:10,1:8:5.21:5,0,42	0/1:13,0:5:19.01:19,0,28	./.	0/1:41,5:34:12.50:13,0,25	./.	0/0:7,0:5:3.01:0,3,69	0/0:25,0:24:47.60:0,48,923	0/0:8,0:4:0.65:0,1,1	0/1:17,2:15:22.45:22,0,163	0/1:10,0:10:5.78:6,0,38	0/0:6,0:6:3.52:0,4,64
chr10	65178237	.	T	TCACCAC	4888.51	PASS	AB=1.000;AC=37;AF=0.712;AN=52;BaseQRankSum=2.760;DP=476;FS=4.905;HRun=0;HaplotypeScore=107.8633;InbreedingCoeff=0.5478;MQ=33.30;MQ0=78;MQRankSum=-5.181;QD=15.37;ReadPosRankSum=-0.769;VQSLOD=3.9679;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:13:22.48:108,0,22	1/1:1,0:1:2.90:16,3,0	0/0:51,0:6:14.77:0,15,156	0/0:49,0:4:8.88:0,9,69	0/0:6,0:5:5.98:0,6,119	1/1:13,0:12:25.16:436,25,0	1/1:29,0:16:21.07:488,21,0	1/1:23,0:13:33.86:494,34,0	0/1:17,0:14:26.91:27,0,39	1/1:20,0:14:18.53:268,19,0	0/1:5,0:5:0:0,0,0	1/1:13,0:15:23.91:404,24,0	0/0:14,0:12:18.05:0,18,334	1/1:13,0:14:0.81:339,1,0	1/1:13,0:12:14.04:336,14,0	1/1:17,0:14:30.49:588,30,0	1/1:12,0:10:15.05:335,15,0	1/1:12,0:9:14.60:218,15,0	1/1:13,0:5:6.02:111,6,0	./.	1/1:48,1:37:1.36:16,1,0	./.	0/0:7,0:6:6.02:0,6,96	0/0:24,0:23:39.06:0,39,806	1/1:8,0:4:3.01:44,3,0	1/1:20,0:15:26.91:470,27,0	1/1:6,3:10:7.97:162,8,0	1/1:5,0:5:5.20:28,5,0
chr10	65178249	.	CCAACAACAA	C	1816.51	PASS	AB=0.913;AC=18;AF=0.333;AN=54;BaseQRankSum=1.374;DP=512;FS=11.203;HRun=0;HaplotypeScore=133.1473;InbreedingCoeff=-0.1018;MQ=32.79;MQ0=93;MQRankSum=-4.159;QD=6.83;ReadPosRankSum=4.651;VQSLOD=1.6637;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:21,1:13:18.77:19,0,200	0/0:2,0:1:3.01:0,3,35	0/0:38,0:6:15.52:0,16,244	0/0:49,0:4:8.62:0,9,126	0/0:8,0:7:6.02:0,6,168	0/1:15,1:13:99:125,0,119	1/1:33,0:21:20.62:178,21,0	0/1:32,0:22:20.89:21,0,467	0/0:22,0:18:14.60:0,15,474	0/1:24,1:13:78.32:93,0,78	0/0:3,0:3:2.40:0,2,54	0/1:15,0:13:80.72:81,0,123	0/0:11,0:9:21.01:0,21,364	0/1:13,1:14:63.05:134,0,63	0/1:12,3:14:99:242,0,130	0/1:18,1:17:47.49:311,0,47	0/1:9,3:10:30.70:151,0,31	0/1:6,6:10:57.64:161,0,58	0/1:14,0:4:8.91:9,0,9	./.	0/0:61,1:44:55.99:0,56,504	0/0:2,0:2:3.01:0,3,47	0/0:9,0:6:12.04:0,12,263	0/0:23,0:23:48.04:0,48,1358	0/0:10,0:3:7.83:0,8,81	1/1:21,2:15:18.99:337,19,0	0/1:9,1:10:16.21:93,0,16	1/1:4,0:4:4.22:24,4,0
chr10	65178309	.	TCAC	T	601.20	PASS	AB=0.947;AC=18;AF=0.391;AN=46;BaseQRankSum=0.912;DP=461;FS=1.892;HRun=0;HaplotypeScore=111.7974;InbreedingCoeff=-0.1785;MQ=26.76;MQ0=95;MQRankSum=-1.827;QD=1.61;ReadPosRankSum=4.233;VQSLOD=1.9343;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:23,2:17:3.50:64,3,0	0/0:3,0:2:5.98:0,6,58	./.	./.	./.	0/1:21,1:19:49.38:49,0,111	0/1:28,0:11:5.02:5,0,72	0/1:44,6:39:99:251,0,326	0/0:13,0:8:6.02:0,6,115	0/1:16,1:10:25.65:26,0,56	0/0:3,0:2:0:0,0,0	0/1:13,2:14:4.84:59,0,5	0/0:12,0:6:7.34:0,7,181	0/1:28,3:25:9.13:35,0,9	1/1:22,2:18:8.94:85,9,0	0/1:15,0:11:17.49:28,0,17	0/1:18,0:14:5.23:5,0,123	1/1:16,0:10:1.57:28,2,0	0/1:20,0:12:29.91:30,0,52	./.	0/1:56,9:53:7.67:8,0,31	./.	0/0:6,0:5:14.22:0,14,205	0/0:20,0:18:27.08:0,27,462	0/1:9,0:5:18.46:18,0,49	0/1:16,2:15:46.31:46,0,50	0/0:8,0:8:5.75:0,6,51	0/0:4,0:4:7.57:0,8,82
chr10	65178351	.	CCAT	C	3122.88	PASS	AB=0.825;AC=36;AF=0.692;AN=52;BaseQRankSum=7.168;DP=509;FS=0.575;HRun=0;HaplotypeScore=88.5445;InbreedingCoeff=0.4163;MQ=35.91;MQ0=96;MQRankSum=-2.719;QD=7.64;ReadPosRankSum=-1.859;VQSLOD=2.6118;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:15,10:21:17.96:292,0,18	1/1:6,0:2:5.96:45,6,0	./.	./.	0/0:15,0:13:26.82:0,27,339	0/1:8,15:19:5.37:51,0,5	0/1:37,1:22:4.12:87,0,4	1/1:39,0:25:39.22:298,39,0	0/0:25,0:16:18.50:0,18,343	1/1:11,2:9:8.67:167,9,0	1/1:4,1:5:12.16:73,12,0	1/1:6,6:11:23.12:315,23,0	0/0:15,0:11:33.02:0,33,524	1/1:11,21:28:4.93:212,5,0	1/1:10,16:18:9.28:103,9,0	1/1:16,6:16:19.97:386,20,0	1/1:19,1:18:23.68:156,24,0	1/1:5,18:20:4.01:236,4,0	1/1:20,1:9:20.07:246,20,0	1/1:4,2:4:6.85:59,7,0	0/1:35,5:28:28.02:160,0,28	1/1:1,6:6:2.94:18,3,0	0/0:9,0:8:16.95:0,17,185	0/0:33,0:28:56.84:0,57,833	0/1:8,1:4:0.14:67,0,0	0/1:17,3:12:4.34:181,0,4	1/1:3,12:15:10.56:95,11,0	1/1:3,4:5:5.97:47,6,0
chr10	65178354	.	TCACCACCACCACCAC	T	2442.08	PASS	AB=0.997;AC=35;AF=0.673;AN=52;BaseQRankSum=4.091;DP=523;FS=7.259;HRun=0;HaplotypeScore=159.5129;InbreedingCoeff=0.3398;MQ=36.86;MQ0=97;MQRankSum=-0.362;QD=5.80;ReadPosRankSum=-1.291;VQSLOD=2.0695;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:20:13.26:235,13,0	1/1:6,0:2:0.81:15,1,0	./.	./.	0/0:15,0:13:30.02:0,30,639	1/1:26,0:22:6.21:102,6,0	0/1:36,0:20:5.86:50,0,6	0/1:46,0:32:99:186,0,200	0/0:25,0:16:38.95:0,39,724	1/1:9,5:9:2.91:128,3,0	1/1:6,0:6:12.66:132,13,0	1/1:13,0:12:12.79:219,13,0	0/0:15,0:11:33.11:0,33,996	1/1:32,0:28:23.42:175,23,0	1/1:24,0:17:8.94:82,9,0	1/1:22,0:16:4.26:125,4,0	0/1:19,0:17:9.48:167,0,9	1/1:23,0:20:17.10:165,17,0	0/1:21,0:10:1.16:81,0,1	1/1:7,0:4:5.21:38,5,0	0/1:41,0:30:1.14:304,0,1	1/1:7,0:6:3.83:19,4,0	0/0:9,0:8:20.92:0,21,396	0/0:35,0:30:72.91:0,73,1869	1/1:10,0:6:14.56:111,15,0	0/1:21,0:12:2.58:170,0,3	0/1:15,0:15:12.71:62,0,13	1/1:6,0:4:5.96:44,6,0
chr10	65178369	.	C	CCAT	7744.09	PASS	AB=0.972;AC=41;AF=0.732;AN=56;BaseQRankSum=1.966;DP=647;FS=21.945;HRun=0;HaplotypeScore=103.4485;InbreedingCoeff=0.7863;MQ=45.17;MQ0=81;MQRankSum=-4.137;QD=15.18;ReadPosRankSum=0.705;VQSLOD=2.6642;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:32,0:28:57.10:802,57,0	1/1:7,0:2:5.97:72,6,0	0/0:12,0:7:8.27:0,8,91	0/0:14,0:11:19.41:0,19,181	0/0:19,0:18:38.86:0,39,490	1/1:29,0:27:38.38:363,38,0	1/1:17,20:24:12.66:167,13,0	0/1:68,2:59:99:524,0,397	0/0:27,0:19:42.05:0,42,584	1/1:22,0:18:46.63:496,47,0	1/1:7,0:7:17.05:209,17,0	1/1:17,0:15:37.19:497,37,0	0/0:18,0:16:32.94:0,33,529	1/1:31,0:27:32.28:396,32,0	1/1:24,0:17:14.70:195,15,0	1/1:14,1:12:32.85:573,33,0	1/1:16,0:15:26.94:428,27,0	1/1:23,0:22:30.05:555,30,0	1/1:15,10:14:36.89:451,37,0	1/1:9,0:7:12:163,12,0	1/1:69,0:56:2.23:641,2,0	1/1:12,0:11:8.92:96,9,0	0/0:14,0:13:29.82:0,30,319	0/0:33,0:31:71.69:0,72,1088	1/1:10,0:8:23.86:226,24,0	1/1:30,0:23:61.72:592,62,0	1/1:16,0:16:4.70:190,5,0	1/1:7,0:4:6.02:111,6,0
chr10	65178429	.	A	AG	1455.91	PASS	AB=0.688;AC=1;AF=0.018;AN=56;BaseQRankSum=6.213;DP=680;FS=13.938;HRun=2;HaplotypeScore=97.4196;InbreedingCoeff=-0.0188;MQ=75.59;MQ0=0;MQRankSum=-2.681;QD=13.73;ReadPosRankSum=-4.422;VQSLOD=0.8615;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,111,1357	0/0:6,0:6:18.06:0,18,223	0/0:21,0:21:57.13:0,57,635	0/0:26,0:26:65.86:0,66,754	0/0:20,0:20:54.12:0,54,650	0/0:33,0:33:87.22:0,87,1049	0/0:28,0:27:57.18:0,57,705	0/1:58,48:105:99:1530,0,1650	0/0:13,0:11:30.09:0,30,372	0/0:19,0:19:51.16:0,51,632	0/0:16,0:16:45.10:0,45,540	0/0:19,0:19:39.08:0,39,465	0/0:13,0:13:27.08:0,27,334	0/0:19,0:19:39.12:0,39,483	0/0:14,0:14:27.08:0,27,334	0/0:8,0:8:21.07:0,21,260	0/0:24,0:24:60.19:0,60,741	0/0:44,0:44:99:0,102,1264	0/0:14,0:14:39.11:0,39,472	0/0:18,0:18:51.11:0,51,602	0/0:48,0:47:99:0,129,1512	0/0:10,0:10:30.09:0,30,371	0/0:11,0:11:29.61:0,30,371	0/0:28,0:28:75.21:0,75,903	0/0:15,0:15:45.12:0,45,543	0/0:33,0:33:96.21:0,96,1133	0/0:17,0:17:33.10:0,33,407	0/0:12,0:12:33.10:0,33,409
chr10	65178565	.	T	TAAACA	4103.56	PASS	AC=36;AF=0.720;AN=50;BaseQRankSum=5.804;DP=250;FS=88.990;HRun=0;HaplotypeScore=85.6293;InbreedingCoeff=0.8620;MQ=79.61;MQ0=18;MQRankSum=-8.064;QD=41.87;ReadPosRankSum=6.713;VQSLOD=-0.0476;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,0:7:21.07:342,21,0	./.	0/0:49,0:17:37.94:0,38,683	0/0:55,0:27:40.49:0,40,315	0/0:9,0:9:18.06:0,18,412	1/1:0,0:6:18.06:285,18,0	1/1:0,0:5:15.05:256,15,0	1/1:4,0:10:30.09:516,30,0	0/0:9,0:6:9.03:0,9,141	1/1:2,0:5:12.04:226,12,0	1/1:1,1:5:9.02:133,9,0	1/1:1,0:5:12.04:175,12,0	0/0:7,0:6:18.06:0,18,404	1/1:0,0:3:6.02:101,6,0	1/1:0,0:5:15.05:236,15,0	1/1:1,0:3:6.02:115,6,0	1/1:1,0:4:9.03:146,9,0	1/1:2,0:6:17.95:292,18,0	1/1:0,0:4:12.04:208,12,0	1/1:1,0:7:21.07:364,21,0	1/1:0,0:3:9.02:113,9,0	./.	0/0:7,0:7:21.07:0,21,458	0/0:13,0:13:39.09:0,39,794	1/1:0,0:5:12.04:228,12,0	1/1:2,0:5:15.05:263,15,0	1/1:0,0:2:6.02:103,6,0	./.
chr10	65178567	.	CT	C	611.19	PASS	AB=0.901;AC=36;AF=0.720;AN=50;BaseQRankSum=6.544;DP=250;FS=26.501;HRun=15;HaplotypeScore=84.6260;InbreedingCoeff=0.5079;MQ=79.14;MQ0=19;MQRankSum=-4.251;QD=4.02;ReadPosRankSum=4.981;VQSLOD=0.0919;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,7:8:12.54:54,13,0	./.	0/0:51,1:18:19.99:0,20,131	0/1:59,0:28:12.17:12,0,25	0/0:9,0:9:8.99:0,9,77	1/1:1,6:6:17.11:87,17,0	1/1:1,4:5:11.24:58,11,0	0/1:7,2:8:6.15:23,0,6	0/0:7,0:5:5.29:0,5,22	1/1:1,3:4:5.75:30,6,0	1/1:4,1:3:2.27:12,2,0	1/1:0,4:4:10.33:47,10,0	0/0:7,0:7:8.94:0,9,79	1/1:1,1:2:2.27:8,2,0	1/1:0,5:5:14.24:72,14,0	1/1:2,1:3:2.75:15,3,0	1/1:1,3:4:8.54:44,9,0	1/1:3,4:6:12.88:67,13,0	1/1:0,4:4:11.61:64,12,0	1/1:3,5:7:14.09:69,14,0	1/1:1,2:3:0.06:1,0,0	./.	0/0:6,0:7:0.09:0,0,45	0/0:11,0:11:13.81:0,14,122	1/1:2,3:5:5.56:29,6,0	1/1:3,3:4:8.53:46,9,0	1/1:0,2:2:5.78:31,6,0	./.
chr10	65183439	.	A	AT	1879.02	PASS	AB=0.652;AC=36;AF=0.692;AN=52;BaseQRankSum=-3.269;DP=162;FS=21.944;HRun=8;HaplotypeScore=22.4393;InbreedingCoeff=0.6496;MQ=63.21;MQ0=2;MQRankSum=-6.263;QD=19.78;ReadPosRankSum=-3.830;VQSLOD=1.0231;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,7:8:8.98:89,9,0	./.	0/0:12,0:8:15.89:0,16,139	0/0:6,0:4:3:0,3,27	0/0:13,0:13:35.96:0,36,315	1/1:1,5:6:18.01:183,18,0	1/1:1,1:2:3.01:35,3,0	1/1:0,7:7:21.05:233,21,0	0/0:7,0:7:14.95:0,15,129	1/1:1,9:10:27.08:311,27,0	1/1:1,8:9:4.83:39,5,0	1/1:0,2:2:6.02:66,6,0	0/0:8,0:8:18:0,18,165	1/1:0,2:2:6.02:66,6,0	1/1:1,4:5:12.03:134,12,0	0/1:3,4:5:8.03:115,0,8	1/1:1,1:2:3.01:35,3,0	1/1:1,2:3:6.02:69,6,0	1/1:0,3:3:9.03:103,9,0	1/1:0,3:3:3.01:35,3,0	./.	0/1:1,1:2:0:0,0,0	0/0:10,0:10:24.01:0,24,220	0/0:11,0:11:33:0,33,297	1/1:1,3:4:6.02:64,6,0	1/1:0,6:6:18.05:208,18,0	1/1:0,11:11:15.04:169,15,0	1/1:0,3:3:9.03:102,9,0
chr10	65183914	.	AT	A	344.57	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-0.536;DP=582;FS=4.904;HRun=9;HaplotypeScore=147.2040;InbreedingCoeff=0.8914;MQ=55.66;MQ0=1;MQRankSum=2.901;QD=18.14;ReadPosRankSum=1.741;VQSLOD=2.3777;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,99,1094	0/0:7,0:7:18.01:0,18,191	0/0:16,0:13:29.81:0,30,286	0/0:6,0:4:6.02:0,6,69	0/0:19,0:19:54.16:0,54,618	0/0:21,1:23:32.58:0,33,601	0/0:15,0:15:30.09:0,30,346	0/0:45,0:45:69.11:0,69,758	1/1:1,18:18:48.03:439,48,0	0/0:33,0:33:87.23:0,87,989	0/0:20,0:20:51.14:0,51,571	0/0:21,0:21:60.09:0,60,662	0/0:17,0:17:42.12:0,42,484	0/0:14,0:14:39.11:0,39,434	0/0:12,0:12:27.08:0,27,308	0/0:22,0:22:60.18:0,60,691	0/0:12,0:12:24.07:0,24,271	0/0:10,0:10:21.06:0,21,241	0/0:18,0:18:36.07:0,36,387	0/0:20,0:20:48.14:0,48,541	0/0:17,0:17:35.70:0,36,406	0/0:17,0:17:45.13:0,45,507	0/0:28,0:28:72.19:0,72,810	0/0:20,0:20:53.99:0,54,603	0/0:17,0:17:42.12:0,42,477	0/0:36,0:36:93.20:0,93,1035	0/0:40,0:39:99:0,108,1233	0/0:13,0:13:38.70:0,39,423
chr10	65183941	.	G	GGGACCGAACCCA	51265.19	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=-5.519;DP=563;FS=3.012;HRun=0;HaplotypeScore=158.4864;InbreedingCoeff=0.9902;MQ=46.84;MQ0=2;MQRankSum=-14.579;QD=118.12;ReadPosRankSum=0.501;VQSLOD=4.9029;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:23,11:43:87.29:4215,87,0	1/1:2,4:7:12.04:730,12,0	0/0:19,0:17:35.91:0,36,988	0/0:13,0:8:24.06:0,24,581	0/0:17,0:17:42.14:0,42,1467	1/1:10,11:23:57.20:3220,57,0	1/1:9,6:16:39.13:2028,39,0	1/1:17,9:32:66.10:2803,66,0	0/0:22,0:21:57.20:0,57,2032	1/1:17,11:30:72.24:3949,72,0	1/1:11,6:19:45.15:2012,45,0	1/1:6,14:21:54.19:3100,54,0	0/0:18,0:18:54.15:0,54,1744	1/1:7,6:14:36.12:1928,36,0	1/1:5,8:17:39.13:1991,39,0	1/1:14,13:28:63.22:3521,63,0	1/1:7,5:15:30.05:1496,30,0	1/1:6,6:14:27.09:1411,27,0	1/1:5,3:10:23.93:982,24,0	1/1:14,4:21:54.11:1919,54,0	1/1:7,5:13:26.89:806,27,0	1/1:9,8:19:51.09:2470,51,0	0/0:19,0:19:51.16:0,51,1656	0/0:21,0:21:60.15:0,60,1984	1/1:5,13:18:51.18:2857,51,0	1/1:14,14:30:81.28:4378,81,0	1/1:15,17:35:90.12:4631,90,0	1/1:3,2:5:15.05:818,15,0
chr10	65184418	.	G	GT	1166.77	PASS	AB=0.704;AC=1;AF=0.018;AN=56;BaseQRankSum=9.543;DP=664;FS=26.902;HRun=1;HaplotypeScore=69.9426;InbreedingCoeff=-0.0185;MQ=90.77;MQ0=0;MQRankSum=-7.621;QD=14.40;ReadPosRankSum=-5.112;VQSLOD=0.5242;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,129,1645	0/0:6,0:6:18.06:0,18,234	0/0:24,0:24:68.94:0,69,835	0/0:32,0:32:80.34:0,80,1019	0/0:32,0:32:93.29:0,93,1190	0/0:20,0:20:60.20:0,60,779	0/0:24,0:24:66.20:0,66,843	0/1:47,34:80:99:1241,0,1042	0/0:15,0:15:45.15:0,45,583	0/0:24,0:24:69.20:0,69,863	0/0:18,0:18:51.15:0,51,647	0/0:21,0:21:57.17:0,57,725	0/0:16,0:16:48.15:0,48,608	0/0:12,0:12:36.12:0,36,467	0/0:21,0:21:63.20:0,63,818	0/0:18,0:18:51.17:0,51,662	0/0:26,0:26:72.23:0,72,934	0/0:19,0:19:57.19:0,57,740	0/0:22,0:22:66.21:0,66,842	0/0:28,0:28:84.27:0,84,1090	0/0:25,0:25:75.21:0,75,930	0/0:25,0:25:72.23:0,72,934	0/0:21,0:21:57.17:0,57,726	0/0:17,0:17:51.15:0,51,647	0/0:18,0:18:54.18:0,54,701	0/0:21,0:21:63.20:0,63,805	0/0:20,0:20:57.19:0,57,739	0/0:14,0:14:42.06:0,42,496
chr10	65186483	.	TTTTC	T	2822.36	PASS	AB=0.997;AC=47;AF=0.839;AN=56;BaseQRankSum=-0.017;DP=484;FS=4.860;HRun=0;HaplotypeScore=58.1632;InbreedingCoeff=0.2605;MQ=41.14;MQ0=55;MQRankSum=-1.504;QD=6.10;ReadPosRankSum=-2.191;VQSLOD=1.1614;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:19:37.29:268,37,0	1/1:9,0:9:1.16:55,1,0	0/1:55,0:5:19.35:19,0,44	0/1:66,1:10:6.28:6,0,38	0/1:9,0:9:25.40:25,0,99	1/1:23,0:9:13.50:97,14,0	1/1:18,0:13:17.82:134,18,0	1/1:14,0:12:18.46:150,18,0	0/1:12,0:8:35.45:35,0,116	1/1:11,0:9:21.68:154,22,0	1/1:11,0:11:18.55:113,19,0	1/1:14,0:10:21.90:209,22,0	0/0:13,0:13:6.61:0,7,196	1/1:6,0:3:5.99:50,6,0	1/1:13,1:8:3.01:41,3,0	1/1:8,1:8:20.87:193,21,0	1/1:21,1:21:24.41:209,24,0	1/1:12,0:9:11.99:105,12,0	1/1:16,0:5:11.93:95,12,0	1/1:15,0:14:32.65:236,33,0	1/1:5,0:3:5.70:28,6,0	1/1:8,0:8:14.31:86,14,0	0/0:8,0:7:3.99:0,4,61	0/1:18,0:13:0.46:0,0,87	1/1:10,0:10:4.48:20,4,0	1/1:21,0:15:38.59:293,39,0	1/1:18,0:12:16.70:188,17,0	1/1:18,2:16:21.23:156,21,0
chr10	65186497	.	C	CCT	1835.22	PASS	AB=0.698;AC=23;AF=0.411;AN=56;BaseQRankSum=-2.401;DP=421;FS=94.218;HRun=0;HaplotypeScore=52.2205;InbreedingCoeff=-0.0498;MQ=34.05;MQ0=45;MQRankSum=-6.458;QD=7.62;ReadPosRankSum=3.053;VQSLOD=-0.7284;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:12,11:17:77.05:92,0,77	0/1:3,5:8:3.38:92,0,3	0/0:38,0:2:5.05:0,5,39	0/0:53,0:5:8.99:0,9,89	0/0:11,0:11:29.43:0,29,312	0/1:3,15:10:6.55:20,0,7	0/1:7,11:14:26.31:40,0,26	0/1:7,2:9:25.67:165,0,26	0/0:10,0:8:23.67:0,24,253	1/1:5,8:12:26.89:340,27,0	1/1:2,5:7:5.85:61,6,0	0/1:6,2:9:31.29:31,0,75	0/0:17,0:17:36:0,36,512	0/0:3,6:5:4.99:0,5,25	1/1:4,11:12:1.29:4,1,0	0/0:6,3:8:9.49:0,9,55	0/1:9,10:18:37.51:59,0,38	0/1:4,4:6:20.95:46,0,21	0/1:8,5:7:24:160,0,24	0/1:7,6:14:43.79:160,0,44	0/1:5,0:2:4.10:10,0,4	1/1:4,3:7:1.34:153,1,0	0/0:6,0:5:8.97:0,9,91	0/0:17,0:13:23.67:0,24,294	0/0:1,8:9:0:0,0,0	0/1:4,10:14:25.04:391,0,25	0/1:11,3:10:46.24:50,0,46	1/1:14,4:12:8.46:123,8,0
chr10	65188066	.	CAG	C	17815.95	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=10.500;DP=660;FS=9.380;HRun=0;HaplotypeScore=103.7393;InbreedingCoeff=0.9947;MQ=91.74;MQ0=1;MQRankSum=-7.285;QD=38.98;ReadPosRankSum=6.002;VQSLOD=6.7440;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,34:35:93.31:1369,93,0	1/1:1,6:7:21.04:281,21,0	0/0:34,0:34:96.33:0,96,1739	0/0:24,0:24:66.16:0,66,1121	0/0:11,0:11:30.10:0,30,561	1/1:1,16:17:45.15:659,45,0	1/1:0,38:38:99:1587,108,0	0/0:24,0:24:63.19:0,63,1097	0/0:28,0:28:84.25:0,84,1477	1/1:0,25:25:72.24:1060,72,0	1/1:2,7:9:17.64:265,18,0	1/1:4,29:33:93.27:1340,93,0	0/0:25,0:25:69.24:0,69,1268	1/1:1,30:31:81.27:1190,81,0	1/1:3,23:26:78.21:1102,78,0	1/1:3,28:30:25.07:1092,25,0	1/1:0,29:29:72.24:1060,72,0	1/1:1,27:28:66.22:971,66,0	1/1:2,15:17:45.14:643,45,0	1/1:0,13:13:30.10:440,30,0	1/1:3,46:49:99:1807,123,0	1/1:1,12:13:36.12:528,36,0	0/0:13,0:13:39.12:0,39,698	0/0:44,0:44:99:0,126,2250	1/1:2,15:17:48.16:705,48,0	1/1:0,23:23:69.23:1016,69,0	1/1:0,11:11:33.11:486,33,0	1/1:1,4:5:15.05:217,15,0
chr10	65188133	.	T	TCGGG	31386.85	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=15.403;DP=709;FS=15.449;HRun=0;HaplotypeScore=182.9857;InbreedingCoeff=0.9983;MQ=72.04;MQ0=0;MQRankSum=-15.244;QD=64.45;ReadPosRankSum=-2.659;VQSLOD=4.3854;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,23:33:87.24:2173,87,0	1/1:3,8:11:30.10:835,30,0	0/0:20,0:20:51.17:0,51,987	0/0:16,0:16:45.13:0,45,814	0/0:19,0:19:51.17:0,51,1008	1/1:7,7:14:39.05:782,39,0	1/1:14,19:33:87.15:1900,87,0	0/0:35,0:35:90.26:0,90,1668	0/0:23,0:23:69.22:0,69,1343	1/1:15,11:26:75.21:1754,75,0	1/1:4,7:11:27.02:595,27,0	1/1:3,34:37:99:2974,108,0	0/0:39,0:39:99:0,117,2334	1/1:7,24:31:87.28:2266,87,0	1/1:6,23:29:81.23:2151,81,0	1/1:5,19:24:47.27:1787,47,0	1/1:7,23:30:72.16:1792,72,0	1/1:7,17:24:66.16:1661,66,0	1/1:9,8:17:45.15:1129,45,0	1/1:6,6:12:30.05:711,30,0	1/1:25,32:57:99:2792,108,0	1/1:8,13:21:60.12:1357,60,0	0/0:22,0:22:66.23:0,66,1307	0/0:48,0:48:99:0,141,2788	1/1:7,9:16:39.11:901,39,0	1/1:14,16:30:84.16:1926,84,0	1/1:5,17:22:57.15:1435,57,0	1/1:2,5:8:18.06:467,18,0
chr10	65188545	.	TTGTGTGTGTGTGTGTGTG	T	3481.78	PASS	AB=0.813;AC=23;AF=0.500;AN=46;BaseQRankSum=5.457;DP=589;FS=10.338;HRun=0;HaplotypeScore=241.6348;InbreedingCoeff=0.3795;MQ=66.04;MQ0=21;MQRankSum=-2.568;QD=14.75;ReadPosRankSum=0.204;VQSLOD=1.2655;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:33,0:9:0.47:0,0,1	./.	0/0:13,0:12:6.02:0,6,265	1/1:16,2:17:3.01:144,3,0	1/1:19,0:19:6.02:89,6,0	0/0:19,0:17:6.49:0,6,134	1/1:16,0:21:14.84:628,15,0	0/1:10,1:11:25.09:218,0,25	0/1:8,0:10:35.41:89,0,35	1/1:29,1:30:5.75:156,6,0	0/0:13,0:14:6.02:0,6,305	1/1:19,3:23:9.03:374,9,0	1/1:22,7:30:12.04:558,12,0	1/1:13,4:18:9.03:395,9,0	0/0:27,0:26:1.36:0,1,3	0/0:17,0:16:1.25:0,1,3	0/0:15,0:15:0:0,0,0	0/1:8,4:12:99:155,0,154	./.	1/1:14,0:14:6.90:74,7,0	0/0:15,0:14:9.03:0,9,367	0/0:36,0:41:36.12:0,36,2080	1/1:6,1:7:3.01:144,3,0	0/0:26,0:24:1.25:0,1,3	1/1:16,5:21:12.03:459,12,0	./.
chr10	65189394	.	C	CTATTATTATTAT	7516.19	PASS	AC=38;AF=0.792;AN=48;BaseQRankSum=1.000;DP=266;FS=0.000;HRun=0;HaplotypeScore=84.9465;InbreedingCoeff=0.6259;MQ=58.97;MQ0=0;MQRankSum=-4.885;QD=40.85;ReadPosRankSum=-0.741;VQSLOD=4.0435;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,0:13:3.01:157,3,0	1/1:6,0:6:9.03:129,9,0	./.	./.	0/0:6,0:6:9.03:0,9,306	1/1:7,0:12:12.04:622,12,0	1/1:10,0:10:6.02:290,6,0	0/0:24,0:39:23.11:0,23,420	0/0:10,0:10:15.05:0,15,499	1/1:9,0:9:18:418,18,0	1/1:4,0:4:3.01:157,3,0	1/1:4,0:4:3.01:43,3,0	0/0:7,0:7:9.03:0,9,292	1/1:8,0:8:9.02:133,9,0	./.	1/1:8,0:8:6.02:188,6,0	1/1:19,0:19:30.02:1010,30,0	1/1:9,0:15:18.06:914,18,0	1/1:16,0:16:21.04:552,21,0	1/1:9,5:16:9.03:443,9,0	1/1:6,1:7:6.02:351,6,0	1/1:1,0:1:3.01:74,3,0	./.	0/0:3,0:3:3.01:0,3,96	1/1:4,0:6:6.02:304,6,0	1/1:3,2:5:9.03:336,9,0	1/1:10,3:13:9.03:518,9,0	1/1:3,9:12:15.05:878,15,0
chr10	65190616	.	TA	T	1272.25	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=0.436;DP=688;FS=0.656;HRun=1;HaplotypeScore=88.3411;InbreedingCoeff=0.9479;MQ=88.83;MQ0=0;MQRankSum=-0.687;QD=38.55;ReadPosRankSum=-3.441;VQSLOD=2.6842;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,163,2589	0/0:6,0:6:18.05:0,18,265	0/0:26,0:26:67.90:0,68,1086	0/0:23,0:23:63.17:0,63,942	0/0:18,0:18:54.18:0,54,863	0/0:20,0:20:60.17:0,60,932	0/0:24,0:24:72.23:0,72,1126	1/1:0,33:33:99:1367,99,0	0/0:28,0:28:84.29:0,84,1341	0/0:32,0:32:96.33:0,96,1535	0/0:5,0:5:15.05:0,15,240	0/0:30,0:30:90.31:0,90,1436	0/0:19,0:19:57.17:0,57,886	0/0:37,0:37:99:0,111,1772	0/0:19,0:19:57.18:0,57,885	0/0:19,0:19:57.19:0,57,911	0/0:32,0:32:96.30:0,96,1509	0/0:32,0:32:96.33:0,96,1535	0/0:28,0:28:81.26:0,81,1247	0/0:13,0:13:36.11:0,36,549	0/0:47,0:47:99:0,141,2222	0/0:12,0:12:36.11:0,36,553	0/0:13,0:13:33.11:0,33,527	0/0:49,0:49:99:0,141,2204	0/0:21,0:21:63.21:0,63,1007	0/0:23,0:23:69.24:0,69,1102	0/0:21,0:21:63.21:0,63,1004	0/0:4,0:4:12.04:0,12,192
chr10	65191252	.	GA	G	2731.30	PASS	AB=0.724;AC=36;AF=0.643;AN=56;BaseQRankSum=7.078;DP=429;FS=3.534;HRun=14;HaplotypeScore=68.8373;InbreedingCoeff=0.3450;MQ=53.46;MQ0=6;MQRankSum=0.120;QD=7.72;ReadPosRankSum=4.096;VQSLOD=2.9863;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,15:26:31.65:211,32,0	0/1:1,2:4:16.88:36,0,17	0/0:2,0:1:3:0,3,28	0/0:4,0:2:0:0,0,0	0/1:7,2:9:5.11:5,0,94	1/1:11,13:25:34.69:232,35,0	1/1:4,10:16:27.66:176,28,0	0/0:20,1:19:14.18:0,14,236	0/1:10,1:11:3.85:4,0,54	1/1:9,6:14:14.81:102,15,0	1/1:4,6:10:14.77:102,15,0	1/1:7,9:16:17.75:123,18,0	0/0:11,0:11:20.94:0,21,174	1/1:9,10:19:23.63:164,24,0	1/1:5,6:9:8.89:62,9,0	0/1:7,5:12:4.13:117,0,4	1/1:13,17:31:26.66:312,27,0	1/1:7,21:28:56.32:390,56,0	1/1:3,11:15:31.77:211,32,0	1/1:1,9:11:12.89:73,13,0	0/1:6,7:12:4.04:120,0,4	0/1:7,4:12:11.89:57,0,12	0/0:9,1:10:0.42:0,0,139	0/0:25,1:27:29.62:0,30,439	1/1:7,4:14:14.94:79,15,0	0/1:10,8:22:3.92:96,0,4	1/1:9,9:18:30.75:197,31,0	0/1:9,3:11:18.99:32,0,19
chr10	65194096	.	TC	T	5628.61	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=1.244;DP=502;FS=9.979;HRun=10;HaplotypeScore=77.2099;InbreedingCoeff=0.9015;MQ=75.67;MQ0=7;MQRankSum=-2.729;QD=15.51;ReadPosRankSum=3.733;VQSLOD=4.7351;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:10,13:20:39.45:338,39,0	1/1:8,1:9:10.92:80,11,0	0/0:30,1:25:44.90:0,45,437	0/0:16,0:14:19.97:0,20,158	1/1:7,11:17:23.97:203,24,0	1/1:8,7:15:28.67:256,29,0	1/1:8,17:24:44.97:390,45,0	0/0:11,0:11:3:0,3,26	1/1:5,0:15:21.91:66,22,0	1/1:3,10:13:20.85:182,21,0	1/1:9,2:10:11.95:100,12,0	1/1:4,14:19:41.91:346,42,0	0/0:19,0:19:48.09:0,48,500	1/1:3,9:11:32.99:284,33,0	1/1:5,15:21:40.99:344,41,0	1/1:10,7:16:27.21:235,27,0	1/1:10,22:33:79.97:675,80,0	1/1:3,13:16:41.99:362,42,0	1/1:2,5:7:14.98:130,15,0	1/1:6,2:8:8.90:70,9,0	1/1:13,5:17:20.92:181,21,0	1/1:4,11:15:33.46:285,33,0	0/0:17,0:17:21.76:0,22,200	0/0:38,0:38:88.74:0,89,932	1/1:13,12:22:16.48:297,16,0	1/1:8,11:19:38.97:338,39,0	1/1:4,18:21:53.65:465,54,0	0/0:4,1:4:2.97:0,3,20
chr10	65194118	.	T	TG	5900.15	PASS	AB=0.796;AC=37;AF=0.685;AN=54;BaseQRankSum=0.142;DP=534;FS=4.224;HRun=9;HaplotypeScore=121.1351;InbreedingCoeff=0.5581;MQ=69.38;MQ0=0;MQRankSum=-5.614;QD=14.82;ReadPosRankSum=-0.322;VQSLOD=4.2919;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,16:24:13.55:373,14,0	0/1:8,2:10:4.62:48,0,5	0/0:28,0:20:14.91:0,15,156	0/1:14,0:11:5.03:5,0,22	0/0:16,0:16:26.97:0,27,234	1/1:5,15:20:40.92:436,41,0	1/1:4,17:21:42.11:464,42,0	0/0:26,0:26:26.41:0,26,274	1/1:5,17:22:48.53:500,49,0	0/1:8,11:18:0.11:226,0,0	1/1:2,11:13:17.37:161,17,0	0/1:16,4:20:24.20:199,0,24	0/0:19,0:19:47.96:0,48,411	1/1:4,11:15:30.07:320,30,0	1/1:9,16:25:40.92:437,41,0	1/1:3,17:20:39.58:432,40,0	0/1:18,16:34:17.99:504,0,18	1/1:11,5:16:1.01:207,1,0	1/1:4,6:10:0.99:217,1,0	1/1:4,8:12:5.98:53,6,0	1/1:9,7:15:20.99:208,21,0	1/1:5,18:23:30.07:324,30,0	0/0:11,0:12:23.02:0,23,188	0/0:35,0:35:80.91:0,81,687	1/1:5,12:17:12.03:133,12,0	1/1:11,11:22:23.99:233,24,0	1/1:7,17:24:32.71:421,33,0	./.
chr10	65194779	.	A	ATG	6027.21	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=11.691;DP=564;FS=3.940;HRun=0;HaplotypeScore=209.0875;InbreedingCoeff=0.9856;MQ=63.06;MQ0=0;MQRankSum=-6.143;QD=12.33;ReadPosRankSum=1.501;VQSLOD=4.5384;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:31,0:31:78.24:379,78,0	1/1:18,0:18:44.25:217,44,0	0/0:11,0:9:14.98:0,15,198	0/0:7,0:7:10.57:0,11,116	0/0:16,0:16:39.11:0,39,569	1/1:23,0:23:61.54:297,62,0	1/1:24,0:24:60.86:297,61,0	1/1:37,0:37:88.65:493,89,0	1/1:1,15:19:18.06:266,18,0	1/1:23,0:23:60.09:290,60,0	1/1:15,0:15:33.56:195,34,0	1/1:24,0:24:55.53:259,56,0	0/0:12,0:12:36.07:0,36,549	1/1:22,0:22:58.18:286,58,0	1/1:20,0:20:55.63:260,56,0	1/1:14,0:14:35.95:165,36,0	1/1:31,0:31:74.12:340,74,0	1/1:34,0:34:81.08:379,81,0	1/1:17,0:17:43.35:209,43,0	1/1:15,0:15:36.87:191,37,0	1/1:27,0:27:49.04:230,49,0	1/1:20,0:21:56:289,56,0	0/0:13,0:13:30.06:0,30,433	0/0:16,0:16:45.15:0,45,724	1/1:24,0:24:59.96:296,60,0	1/1:21,0:21:58.57:280,59,0	1/1:20,0:20:50.64:273,51,0	1/1:9,0:9:22.55:135,23,0
chr10	65194782	.	C	CT	15443.61	PASS	AB=1.000;AC=43;AF=0.768;AN=56;BaseQRankSum=11.559;DP=574;FS=6.655;HRun=0;HaplotypeScore=167.0356;InbreedingCoeff=0.8947;MQ=63.98;MQ0=0;MQRankSum=-5.765;QD=31.07;ReadPosRankSum=2.616;VQSLOD=4.1379;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,32:32:84.10:1031,84,0	1/1:0,18:18:45.11:563,45,0	0/0:9,0:7:11.27:0,11,112	0/0:10,0:10:9.06:0,9,117	0/0:16,0:16:33.08:0,33,411	1/1:2,23:25:63.14:800,63,0	1/1:0,22:22:60.11:745,60,0	1/1:1,35:36:92.84:992,93,0	0/1:22,0:22:7.29:92,0,7	1/1:1,23:24:69.19:877,69,0	1/1:2,13:15:33.10:411,33,0	1/1:0,23:23:60.19:777,60,0	0/0:11,0:11:33.02:0,33,406	1/1:0,21:21:57.18:741,57,0	1/1:0,22:22:60.13:748,60,0	1/1:0,14:14:39.13:505,39,0	1/1:0,31:31:81.26:1048,81,0	1/1:0,34:34:90.24:1138,90,0	1/1:2,18:20:51.01:596,51,0	1/1:0,16:16:41.34:507,41,0	1/1:0,28:28:53.40:676,53,0	1/1:1,20:21:60.11:724,60,0	0/0:14,0:14:33.01:0,33,415	0/0:17,0:17:48.14:0,48,633	1/1:1,24:25:65.94:811,66,0	1/1:1,20:21:63:749,63,0	1/1:1,18:19:51.15:643,51,0	1/1:0,8:8:21.07:272,21,0
chr10	65195478	.	CG	C	6283.40	PASS	AB=0.956;AC=43;AF=0.768;AN=56;BaseQRankSum=6.510;DP=421;FS=12.829;HRun=10;HaplotypeScore=99.7034;InbreedingCoeff=0.8013;MQ=72.32;MQ0=0;MQRankSum=-2.976;QD=17.36;ReadPosRankSum=5.185;VQSLOD=4.1497;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,18:23:44.60:389,45,0	1/1:1,4:5:12:104,12,0	0/0:13,0:9:10.27:0,10,100	0/0:15,0:13:31.46:0,31,264	0/1:9,1:10:2.02:2,0,187	1/1:2,7:9:20.98:182,21,0	1/1:6,19:25:53.93:464,54,0	0/0:9,0:9:18.07:0,18,85	0/0:10,0:10:16.33:0,16,137	1/1:4,9:13:32.98:283,33,0	1/1:5,6:11:14.99:130,15,0	1/1:2,25:27:77.98:676,78,0	0/0:12,0:12:26.61:0,27,275	1/1:4,19:24:62.01:525,62,0	1/1:2,16:18:19.77:380,20,0	1/1:2,12:14:38.99:338,39,0	1/1:5,15:20:44.99:390,45,0	1/1:3,26:29:77.98:677,78,0	1/1:3,6:10:20.03:162,20,0	1/1:2,6:8:14.99:130,15,0	1/1:6,26:32:59.92:518,60,0	1/1:0,8:8:21:181,21,0	0/1:9,0:9:0.38:0,0,191	0/1:22,1:22:0.22:0,0,406	1/1:5,10:15:20.96:182,21,0	1/1:2,9:11:29.99:260,30,0	1/1:4,10:14:29.99:259,30,0	1/1:2,2:4:5.99:51,6,0
chr10	65195488	.	G	GA	228.56	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-4.119;DP=437;FS=1.038;HRun=1;HaplotypeScore=141.6838;InbreedingCoeff=0.8859;MQ=73.63;MQ0=0;MQRankSum=2.609;QD=17.58;ReadPosRankSum=-4.255;VQSLOD=2.4908;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:58.38:0,58,344	0/0:7,0:7:16.86:0,17,100	0/0:12,0:9:15.02:0,15,165	0/0:19,0:17:21.40:0,21,310	0/0:9,0:9:23.93:0,24,271	0/0:10,0:10:29.21:0,29,169	0/0:30,0:30:81.82:0,82,486	1/1:0,10:13:35.93:323,36,0	0/0:9,0:9:20.93:0,21,194	0/0:12,0:13:34.95:0,35,205	0/0:8,0:8:14.58:0,15,83	0/0:28,0:28:81.72:0,82,469	0/0:12,0:12:35.99:0,36,361	0/0:24,0:25:70.04:0,70,400	0/0:21,0:21:61.46:0,61,380	0/0:14,0:15:43.81:0,44,255	0/0:15,0:15:43.72:0,44,246	0/0:28,0:29:79.42:0,79,458	0/0:12,0:12:32.23:0,32,203	0/0:9,0:10:20.45:0,20,119	0/0:33,0:33:70.16:0,70,407	0/0:9,0:9:19.64:0,20,104	0/0:11,0:11:29.99:0,30,312	0/0:20,0:19:59.94:0,60,640	0/0:14,0:14:26.34:0,26,154	0/0:13,0:13:38.07:0,38,226	0/0:12,0:12:35.13:0,35,204	0/0:3,0:3:8.82:0,9,53
chr10	65195526	.	GAGTAGGATTC	G	18137.07	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=11.502;DP=443;FS=10.519;HRun=0;HaplotypeScore=174.2576;InbreedingCoeff=0.9396;MQ=77.93;MQ0=0;MQRankSum=-12.782;QD=55.98;ReadPosRankSum=3.989;VQSLOD=3.8497;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,17:26:42.14:1290,42,0	1/1:2,5:7:8.60:281,9,0	0/0:11,0:11:27.06:0,27,1158	0/0:21,0:21:48.12:0,48,1760	0/0:9,0:9:21.06:0,21,844	1/1:4,8:12:24.08:716,24,0	1/1:12,17:29:60.21:1775,60,0	0/0:23,0:23:57.20:0,57,2613	0/0:15,0:15:42.14:0,42,2075	1/1:4,3:7:9.03:281,9,0	1/1:4,4:8:6.02:187,6,0	1/1:11,15:26:51.15:1412,51,0	0/0:12,0:12:33.11:0,33,1635	1/1:7,14:21:45.15:1406,45,0	1/1:6,13:19:42.14:1312,42,0	1/1:4,12:16:39.10:1146,39,0	1/1:4,7:11:21.07:656,21,0	1/1:18,9:27:33.11:933,33,0	1/1:4,10:14:30.09:767,30,0	1/1:2,8:10:15.05:413,15,0	1/1:15,11:26:23.45:644,23,0	1/1:2,12:14:36.12:1116,36,0	0/0:8,0:8:18.05:0,18,792	0/0:20,0:20:60.21:0,60,2914	1/1:2,15:17:39.13:1145,39,0	1/1:4,13:17:39.13:1200,39,0	1/1:2,12:14:42.14:1269,42,0	1/1:1,2:3:6.02:188,6,0
chr10	65195538	.	GTA	G	1699.98	PASS	AB=0.994;AC=25;AF=0.446;AN=56;BaseQRankSum=15.972;DP=435;FS=3.964;HRun=0;HaplotypeScore=152.5477;InbreedingCoeff=-0.1226;MQ=79.75;MQ0=0;MQRankSum=-14.419;QD=5.63;ReadPosRankSum=9.841;VQSLOD=1.8070;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:19:30.04:158,30,0	0/1:7,0:7:27.06:27,0,38	0/0:14,0:13:36.09:0,36,692	0/0:21,0:21:63.17:0,63,1226	0/0:10,0:10:30.09:0,30,573	1/1:9,1:11:2.42:70,2,0	0/1:30,0:30:96.64:169,0,97	0/0:27,0:27:81.28:0,81,1639	0/0:15,0:15:45.15:0,45,913	0/1:5,0:5:27.03:27,0,49	0/1:8,0:8:16.97:17,0,51	0/1:22,0:22:21.14:182,0,21	0/0:14,0:14:42.14:0,42,853	1/1:14,2:16:42.05:194,42,0	1/1:15,0:15:39.17:180,39,0	0/1:15,0:15:20.89:135,0,21	0/1:11,0:11:38.15:67,0,38	0/1:19,0:19:74.41:74,0,197	0/1:16,0:16:38.11:38,0,373	0/1:9,0:9:26.15:37,0,26	0/1:29,1:30:33.07:33,0,161	0/1:15,0:15:13.66:110,0,14	0/0:7,0:7:18.05:0,18,329	0/0:25,0:25:75.26:0,75,1486	0/1:19,0:19:86.87:99,0,87	0/1:17,0:17:99:106,0,174	0/1:15,1:16:13.57:130,0,14	1/1:2,0:2:5.60:26,6,0
chr10	65195550	.	T	TG	530.64	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-6.751;DP=492;FS=19.877;HRun=6;HaplotypeScore=155.4956;InbreedingCoeff=0.9105;MQ=84.97;MQ0=0;MQRankSum=4.136;QD=23.07;ReadPosRankSum=-2.083;VQSLOD=1.3583;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:60.12:0,60,607	0/0:9,0:9:17.69:0,18,176	0/0:21,0:20:54.06:0,54,524	0/0:24,0:23:47.54:0,48,444	0/0:10,0:10:30.05:0,30,299	0/0:12,0:12:30.06:0,30,302	0/0:35,0:35:99:0,102,1032	1/1:5,18:23:51.14:625,51,0	0/0:16,0:16:48.11:0,48,489	0/0:5,0:5:15.03:0,15,152	0/0:9,0:9:18.04:0,18,183	0/0:23,0:23:66.13:0,66,666	0/0:14,0:14:39.06:0,39,389	0/0:18,0:18:51.08:0,51,503	0/0:19,0:19:57.09:0,57,567	0/0:16,0:16:48.10:0,48,486	0/0:14,0:14:36.08:0,36,364	0/0:20,0:20:54.11:0,54,548	0/0:18,0:18:48.10:0,48,487	0/0:11,0:11:24.05:0,24,243	0/0:36,0:36:72.15:0,72,729	0/0:17,0:17:47.59:0,48,461	0/0:7,0:7:21.05:0,21,213	0/0:25,0:25:72.16:0,72,734	0/0:20,0:20:48.07:0,48,477	0/0:20,0:20:57.12:0,57,577	0/0:20,0:20:59.99:0,60,589	0/0:4,0:4:9.02:0,9,91
chr10	65198513	.	TATTG	T	16379.14	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=10.912;DP=728;FS=2.442;HRun=0;HaplotypeScore=131.5345;InbreedingCoeff=0.9949;MQ=64.62;MQ0=0;MQRankSum=-2.765;QD=31.50;ReadPosRankSum=4.830;VQSLOD=4.9418;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,38:44:90.15:1425,90,0	1/1:4,11:15:24.08:405,24,0	0/0:21,0:18:21.07:0,21,421	0/0:11,0:11:21.06:0,21,445	0/0:27,0:27:75.24:0,75,1779	1/1:7,26:33:71.68:1048,72,0	1/1:6,18:24:48.16:810,48,0	0/0:39,0:39:85.49:0,85,1849	0/0:36,0:36:66.32:0,66,1521	1/1:8,31:39:93.21:1459,93,0	1/1:9,8:17:15.05:253,15,0	1/1:4,22:26:60.12:978,60,0	0/0:22,0:22:60.21:0,60,1463	1/1:5,27:32:60.21:1012,60,0	1/1:3,33:36:81.21:1333,81,0	1/1:6,20:26:51.05:797,51,0	1/1:6,22:28:51.07:825,51,0	1/1:6,16:22:36.10:607,36,0	1/1:5,18:23:54.07:720,54,0	1/1:8,14:22:33:493,33,0	1/1:3,20:23:36.61:667,37,0	1/1:3,15:18:44.93:660,45,0	0/0:19,0:19:54.14:0,54,1240	0/0:33,0:33:87.30:0,87,2113	1/1:4,16:20:39.13:657,39,0	1/1:8,20:28:57.18:915,57,0	1/1:9,24:33:57.19:962,57,0	1/1:4,7:11:21.07:354,21,0
chr10	65198661	.	GT	G	380.88	PASS	AB=0.736;AC=2;AF=0.036;AN=56;BaseQRankSum=6.338;DP=639;FS=7.891;HRun=2;HaplotypeScore=74.7840;InbreedingCoeff=-0.0371;MQ=70.54;MQ0=0;MQRankSum=4.604;QD=10.02;ReadPosRankSum=-3.840;VQSLOD=-0.2509;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,141,2221	0/0:10,0:10:30.10:0,30,480	0/1:12,9:21:99:305,0,380	0/1:12,5:17:99:165,0,393	0/0:17,0:17:51.17:0,51,815	0/0:16,0:16:48.15:0,48,744	0/0:30,0:30:90.31:0,90,1431	0/0:24,0:24:72.24:0,72,1122	0/0:32,0:32:93.30:0,93,1463	0/0:22,0:22:63.20:0,63,964	0/0:13,0:13:39.13:0,39,623	0/0:20,0:20:57.19:0,57,908	0/0:26,0:26:78.23:0,78,1198	0/0:35,0:35:99:0,102,1630	0/0:33,0:33:99:0,99,1579	0/0:21,0:21:63.21:0,63,1007	0/0:35,0:35:99:0,105,1675	0/0:23,0:23:69.24:0,69,1103	0/0:18,0:18:54.17:0,54,841	0/0:20,0:20:60.20:0,60,959	0/0:45,0:45:99:0,135,2125	0/0:14,0:14:39.13:0,39,621	0/0:15,0:15:45.15:0,45,717	0/0:22,0:22:66.23:0,66,1055	0/0:12,0:12:36.12:0,36,576	0/0:23,0:23:69.22:0,69,1079	0/0:18,0:18:54.18:0,54,853	0/0:10,0:10:30.10:0,30,480
chr10	65198863	.	T	TTGTTGC	12628.13	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=4.915;DP=583;FS=22.710;HRun=0;HaplotypeScore=121.3514;InbreedingCoeff=0.9887;MQ=67.49;MQ0=8;MQRankSum=-5.387;QD=31.49;ReadPosRankSum=-1.282;VQSLOD=2.5093;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:30:74.50:559,75,0	1/1:15,0:15:23.80:334,24,0	0/0:21,0:15:10.29:0,10,141	0/0:26,0:20:38.29:0,38,377	0/0:17,0:17:32.83:0,33,263	1/1:17,0:16:41.97:518,42,0	1/1:19,0:19:29.84:495,30,0	0/0:30,0:30:63.48:0,63,625	0/0:19,0:18:51.02:0,51,803	1/1:27,0:27:49.47:529,49,0	1/1:12,0:12:26.82:215,27,0	1/1:31,0:31:83.93:1759,84,0	0/0:24,0:24:66.07:0,66,995	1/1:18,0:18:35.85:807,36,0	1/1:41,0:40:99:1975,102,0	1/1:20,0:19:32.78:669,33,0	1/1:23,0:24:50.98:1015,51,0	1/1:18,5:24:50.85:926,51,0	1/1:9,0:10:23.59:268,24,0	1/1:8,0:8:23.86:287,24,0	1/1:31,0:30:23.95:281,24,0	1/1:18,0:17:41.10:315,41,0	0/0:14,0:14:23.90:0,24,199	0/0:31,0:31:84.18:0,84,1607	1/1:13,0:12:26.19:189,26,0	1/1:19,0:19:41.95:388,42,0	1/1:16,0:16:42:765,42,0	1/1:5,0:7:18.01:334,18,0
chr10	65198869	.	C	CTGT	7537.94	PASS	AB=0.736;AC=25;AF=0.446;AN=56;BaseQRankSum=0.837;DP=574;FS=9.933;HRun=0;HaplotypeScore=105.4386;InbreedingCoeff=-0.0580;MQ=61.04;MQ0=11;MQRankSum=-5.492;QD=18.61;ReadPosRankSum=2.379;VQSLOD=4.2381;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:32,0:32:37.32:529,0,37	0/1:6,7:15:68.04:160,0,68	0/0:21,0:14:4.28:0,4,154	0/0:22,0:16:29.30:0,29,376	0/0:15,0:15:32.83:0,33,263	1/1:14,2:14:13.13:376,13,0	0/1:10,13:23:98.05:242,0,98	0/0:25,0:25:63.94:0,64,744	0/0:21,0:20:60.03:0,60,773	0/1:22,1:23:3.61:421,0,4	1/1:9,0:9:26.75:212,27,0	0/1:17,13:30:56.46:923,0,56	0/0:23,0:23:66.15:0,66,954	0/1:4,14:18:42.85:380,0,43	0/1:30,13:42:99:1107,0,166	0/1:7,15:21:76.87:386,0,77	0/1:10,15:25:71.38:415,0,71	0/1:22,5:27:78.80:513,0,79	0/1:11,0:9:15.92:156,0,16	0/1:7,1:8:42.97:161,0,43	0/1:12,22:33:99:136,0,103	1/1:17,0:16:40.86:337,41,0	0/0:10,0:10:23.90:0,24,220	0/0:32,0:32:90.28:0,90,1451	1/1:13,0:12:26.19:189,26,0	0/1:2,15:17:6.94:347,0,7	0/1:8,6:14:6.92:379,0,7	1/1:5,3:7:11.89:168,12,0
chr10	65198892	.	G	GCTA	7934.34	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=2.062;DP=565;FS=11.796;HRun=0;HaplotypeScore=109.1785;InbreedingCoeff=0.9821;MQ=63.59;MQ0=9;MQRankSum=-1.511;QD=19.54;ReadPosRankSum=-3.171;VQSLOD=2.8318;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:25:43.97:352,44,0	1/1:13,2:15:18.77:210,19,0	0/0:26,0:22:39.53:0,40,480	0/0:22,0:16:25.31:0,25,319	0/0:6,0:6:14.98:0,15,125	1/1:14,2:14:31.51:307,32,0	1/1:23,3:26:41.63:449,42,0	0/0:18,0:18:27.02:0,27,275	0/0:21,0:21:57.10:0,57,710	1/1:14,1:15:20.49:312,20,0	1/1:7,0:7:17.98:149,18,0	1/1:19,11:31:60.54:881,61,0	0/0:23,0:23:60.11:0,60,754	1/1:10,7:17:32.10:437,32,0	1/1:27,13:40:71.64:955,72,0	1/1:16,5:20:35.64:423,36,0	1/1:25,6:31:51.32:578,51,0	1/1:26,3:29:41.78:498,42,0	1/1:20,0:18:35.85:334,36,0	1/1:13,1:14:15.07:170,15,0	1/1:37,0:36:62.78:531,63,0	1/1:11,0:10:20.97:174,21,0	0/0:6,0:6:12:0,12,118	0/0:37,0:37:99:0,108,1422	1/1:9,0:8:17.97:147,18,0	1/1:15,0:15:33.30:280,33,0	1/1:14,5:19:46.79:508,47,0	1/1:6,2:7:17.97:240,18,0
chr10	65199725	.	CCACTG	C	775.37	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-2.685;DP=829;FS=0.000;HRun=0;HaplotypeScore=234.2060;InbreedingCoeff=0.8529;MQ=82.72;MQ0=3;MQRankSum=-3.295;QD=11.24;ReadPosRankSum=0.322;VQSLOD=2.8407;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:63.22:0,63,1274	0/0:14,0:14:15.05:0,15,303	0/0:36,0:30:13.45:0,13,67	0/0:72,0:48:25.68:0,26,338	1/1:7,9:16:12.04:215,12,0	0/0:17,0:17:21.07:0,21,425	0/0:51,0:51:34.73:0,35,471	1/1:24,0:24:2.86:44,3,0	1/1:29,0:29:36.12:644,36,0	0/0:18,0:18:26.83:0,27,526	0/0:7,0:7:8.70:0,9,132	0/0:43,0:43:74.99:0,75,1469	0/0:24,0:24:54.19:0,54,1505	0/0:32,0:32:42.14:0,42,845	0/0:31,0:31:65.96:0,66,1286	0/0:34,0:34:63.22:0,63,1250	0/0:42,0:42:60.21:0,60,1214	0/0:20,0:20:12.04:0,12,243	0/0:14,0:14:21.07:0,21,419	0/0:20,0:20:44.58:0,45,778	0/0:86,0:86:78.24:0,78,1573	0/0:16,0:16:13.33:0,13,198	0/0:10,0:10:15.05:0,15,419	0/0:59,0:59:99:0,117,3205	0/0:12,0:12:15.05:0,15,306	0/0:24,0:24:45.15:0,45,872	0/0:19,0:18:30.10:0,30,607	0/0:8,0:8:21.07:0,21,424
chr10	65199737	.	ACT	A	109.95	PASS	AB=0.711;AC=1;AF=0.018;AN=56;BaseQRankSum=4.821;DP=880;FS=1.774;HRun=0;HaplotypeScore=209.4263;InbreedingCoeff=-0.0208;MQ=80.75;MQ0=9;MQRankSum=-2.492;QD=3.44;ReadPosRankSum=0.268;VQSLOD=2.4963;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:75.23:0,75,1443	0/0:14,0:14:24.08:0,24,451	0/0:36,0:29:68.41:0,68,994	0/0:97,0:56:99:0,101,1476	0/0:17,0:17:12.04:0,12,324	0/0:17,0:17:33.09:0,33,596	0/0:54,0:54:62.58:0,63,890	0/0:23,0:22:54.34:0,54,808	0/1:19,13:32:99:184,0,155	0/0:23,0:23:66.23:0,66,1259	0/0:9,0:9:11.76:0,12,151	0/0:36,0:36:84.17:0,84,1599	0/0:24,0:24:72.25:0,72,1376	0/0:31,0:31:42.14:0,42,848	0/0:37,0:37:78.13:0,78,1435	0/0:36,0:36:72.25:0,72,1416	0/0:43,0:43:75.24:0,75,1432	0/0:20,0:20:27.09:0,27,487	0/0:15,0:12:36.12:0,36,662	0/0:20,0:20:47.94:0,48,867	0/0:81,0:81:99:0,108,2021	0/0:19,0:19:28.27:0,28,347	0/0:10,0:10:30.10:0,30,539	0/0:57,0:57:99:0,172,3273	0/0:14,0:14:21.07:0,21,394	0/0:29,0:29:84.13:0,84,1530	0/0:22,0:21:36.12:0,36,716	0/0:9,0:9:24.08:0,24,472
chr10	65199740	.	GCAC	G	111.90	PASS	AB=0.856;AC=2;AF=0.036;AN=56;BaseQRankSum=5.134;DP=872;FS=0.800;HRun=0;HaplotypeScore=221.2638;InbreedingCoeff=-0.0354;MQ=80.88;MQ0=10;MQRankSum=-2.199;QD=2.33;ReadPosRankSum=0.568;VQSLOD=2.6796;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:56:72.22:0,72,1436	0/0:14,0:14:24.08:0,24,441	0/0:34,0:28:59.65:0,60,911	0/0:105,0:60:73.55:0,74,1611	0/1:16,0:16:6.87:7,0,277	0/0:17,0:17:30.10:0,30,581	0/0:55,0:55:55.65:0,56,733	0/0:17,0:16:37.31:0,37,585	0/1:19,13:32:99:186,0,278	0/0:21,0:21:59.95:0,60,1141	0/0:10,0:10:14.13:0,14,157	0/0:35,0:35:81.01:0,81,1656	0/0:24,0:24:72.25:0,72,1594	0/0:31,0:31:42.14:0,42,902	0/0:35,0:35:71.98:0,72,1432	0/0:35,0:35:66.23:0,66,1393	0/0:43,0:43:69.05:0,69,1404	0/0:19,0:19:24.08:0,24,435	0/0:15,0:12:36.12:0,36,708	0/0:21,0:21:49.94:0,50,873	0/0:78,0:78:99:0,99,1948	0/0:18,0:18:24.57:0,25,290	0/0:11,0:11:33.11:0,33,618	0/0:57,0:57:99:0,172,3726	0/0:12,0:12:15.05:0,15,303	0/0:29,0:29:87.03:0,87,1586	0/0:22,0:21:36.12:0,36,740	0/0:9,0:9:24.08:0,24,470
chr10	65199745	.	G	GCAGTA	24820.03	PASS	AB=1.000;AC=41;AF=0.732;AN=56;BaseQRankSum=-15.587;DP=917;FS=5.047;HRun=0;HaplotypeScore=163.6581;InbreedingCoeff=0.8705;MQ=80.17;MQ0=11;MQRankSum=-2.433;QD=38.84;ReadPosRankSum=8.084;VQSLOD=4.0356;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:1,50:57:63.22:1996,63,0	1/1:1,11:13:15.52:475,16,0	0/0:36,0:28:25.70:0,26,526	0/0:112,0:62:82.46:0,82,1248	0/0:17,0:17:33.56:0,34,465	1/1:2,15:19:21.07:666,21,0	1/1:4,49:58:21.04:663,21,0	0/0:19,0:18:54.16:0,54,852	0/1:31,0:31:99:356,0,266	1/1:0,22:26:68.94:1485,69,0	1/1:0,8:10:5.57:189,6,0	1/1:1,37:41:75.26:2334,75,0	0/0:24,0:24:72.25:0,72,1446	1/1:0,33:36:41.96:1331,42,0	1/1:2,33:39:63.22:1996,63,0	1/1:0,35:35:63.22:1992,63,0	1/1:1,40:43:60.21:1903,60,0	1/1:3,20:24:15.05:423,15,0	1/1:4,12:15:42.12:957,42,0	1/1:0,19:20:39.08:1236,39,0	1/1:4,67:74:78.25:2474,78,0	1/1:2,16:20:9.03:286,9,0	0/0:10,0:10:24.06:0,24,434	0/0:60,0:60:99:0,181,3402	1/1:0,13:14:15.05:455,15,0	1/1:1,28:30:87.28:1966,87,0	1/1:1,20:21:33.09:973,33,0	1/1:0,9:9:21.07:664,21,0
chr10	65200265	.	GAGAC	G	993.77	PASS	AB=0.597;AC=12;AF=0.429;AN=28;BaseQRankSum=-2.856;DP=368;FS=20.000;HRun=0;HaplotypeScore=52.1023;InbreedingCoeff=0.3808;MQ=53.78;MQ0=223;MQRankSum=-2.725;QD=10.35;ReadPosRankSum=2.396;VQSLOD=0.9135;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,2:4:0:0,0,0	0/0:2,4:4:0:0,0,0	0/0:17,0:3:0.26:0,0,25	0/0:31,0:12:0.20:0,0,8	./.	0/1:4,10:11:0:0,0,0	./.	./.	./.	1/1:3,7:7:18.01:302,18,0	./.	1/1:11,7:7:6.02:112,6,0	./.	0/0:6,3:2:0:0,0,0	./.	1/1:9,9:7:6.02:96,6,0	./.	./.	./.	0/0:1,9:10:0:0,0,1	./.	./.	0/0:12,0:9:0:0,0,1	./.	0/1:4,7:7:0:1,0,0	1/1:9,9:11:30.09:506,30,0	1/1:4,3:3:2.88:60,3,0	./.
chr10	65206021	.	G	GAA	591.90	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=0.279;DP=612;FS=5.618;HRun=12;HaplotypeScore=82.8593;InbreedingCoeff=0.7866;MQ=69.12;MQ0=3;MQRankSum=-2.445;QD=17.41;ReadPosRankSum=-4.190;VQSLOD=1.8991;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:42:88.01:0,88,876	0/0:11,0:11:21.18:0,21,215	0/0:29,0:19:13.07:0,13,129	0/0:22,0:15:1.04:0,1,95	0/0:20,0:22:38.49:0,38,382	0/0:25,0:25:59.95:0,60,554	0/0:21,0:21:53.97:0,54,486	1/1:10,21:34:38.23:686,38,0	0/0:19,0:20:44.63:0,45,396	0/0:27,0:28:71.76:0,72,642	0/0:14,0:15:26.70:0,27,231	0/0:19,0:19:47.70:0,48,423	0/0:18,0:18:47.99:0,48,444	0/0:17,0:17:38.96:0,39,355	0/0:19,0:21:47.75:0,48,428	0/0:16,0:16:35.92:0,36,324	0/0:23,0:28:62.19:0,62,528	0/0:23,0:23:28.63:0,29,413	0/0:27,0:31:52.12:0,52,489	0/0:16,0:17:32.84:0,33,352	0/0:16,0:18:23.83:0,24,266	0/0:18,0:18:51.05:0,51,472	0/0:19,0:19:44.10:0,44,414	0/0:15,0:15:41.99:0,42,380	0/0:18,0:20:41.57:0,42,418	0/0:26,0:27:56.65:0,57,511	0/0:22,0:24:56.39:0,56,490	0/0:10,0:10:20.91:0,21,186
chr10	65207806	.	GT	G	1064.97	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.344;DP=680;FS=4.329;HRun=1;HaplotypeScore=68.8454;InbreedingCoeff=0.9938;MQ=80.11;MQ0=0;MQRankSum=-2.631;QD=31.32;ReadPosRankSum=2.293;VQSLOD=3.3957;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,117,1697	0/0:9,0:9:24.08:0,24,353	0/0:19,0:19:44.14:0,44,618	0/0:20,0:20:53.32:0,53,673	0/0:19,0:19:57.19:0,57,869	0/0:21,0:21:60.11:0,60,857	0/0:39,0:39:99:0,109,1676	0/0:18,1:19:54.13:0,54,772	1/1:1,33:34:44.27:1160,44,0	0/0:21,0:21:60.19:0,60,882	0/0:15,0:15:39.02:0,39,577	0/0:29,0:29:75.82:0,76,1204	0/0:23,0:23:69.18:0,69,1018	0/0:28,0:28:81.26:0,81,1230	0/0:21,0:21:63.19:0,63,956	0/0:27,0:27:78.24:0,78,1183	0/0:38,0:37:99:0,108,1636	0/0:19,0:19:57.17:0,57,842	0/0:18,0:18:50.63:0,51,765	0/0:16,0:16:42.11:0,42,610	0/0:49,0:49:99:0,144,2105	0/0:23,0:23:69.20:0,69,1015	0/0:14,0:14:42.14:0,42,666	0/0:36,0:36:99:0,108,1677	0/0:27,0:27:81.13:0,81,1136	0/0:26,0:26:78.25:0,78,1192	0/0:23,0:23:63.17:0,63,937	0/0:7,0:7:21.05:0,21,305
chr10	65207807	.	TC	T	367.32	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=8.617;DP=687;FS=4.374;HRun=8;HaplotypeScore=72.4583;InbreedingCoeff=0.9904;MQ=79.86;MQ0=0;MQRankSum=-3.425;QD=10.80;ReadPosRankSum=1.872;VQSLOD=2.5713;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,102,1221	0/0:9,0:9:24.03:0,24,273	0/0:18,0:18:33.05:0,33,359	0/0:21,0:21:38.36:0,38,437	0/0:19,0:19:57.16:0,57,676	0/0:21,0:21:57.15:0,57,667	0/0:37,2:39:76.32:0,76,1190	0/0:19,0:19:42.12:0,42,498	1/1:34,0:34:51.61:462,52,0	0/0:21,0:21:57.17:0,57,680	0/0:15,0:15:42.11:0,42,485	0/0:28,1:29:52.25:0,52,892	0/0:23,0:23:63.18:0,63,748	0/0:29,0:29:84.19:0,84,965	0/0:21,0:21:57.17:0,57,688	0/0:27,0:27:72.20:0,72,856	0/0:37,0:36:99:0,102,1220	0/0:19,0:19:51.16:0,51,615	0/0:19,1:20:22.15:0,22,537	0/0:18,0:18:42.10:0,42,481	0/0:49,0:49:99:0,126,1521	0/0:23,0:23:63.19:0,63,760	0/0:14,0:14:42.13:0,42,506	0/0:36,0:36:99:0,105,1251	0/0:27,0:27:66.20:0,66,796	0/0:29,0:29:78.22:0,78,924	0/0:23,0:23:57.65:0,58,688	0/0:8,0:8:21.05:0,21,240
chr10	65208357	.	TAG	T	17299.25	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=12.737;DP=665;FS=1.382;HRun=0;HaplotypeScore=127.1251;InbreedingCoeff=0.9953;MQ=89.25;MQ0=1;MQRankSum=-8.338;QD=38.70;ReadPosRankSum=4.452;VQSLOD=6.3347;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,33:42:96.32:1411,96,0	1/1:3,4:7:21.07:304,21,0	0/0:25,0:25:67.11:0,67,1200	0/0:33,0:33:89.48:0,89,1495	0/0:17,0:17:48.16:0,48,899	1/1:4,18:22:34.28:772,34,0	1/1:3,21:24:72.24:1059,72,0	0/0:27,0:27:78.27:0,78,1458	1/1:3,25:28:84.28:1235,84,0	0/0:31,0:31:90.30:0,90,1654	0/0:15,0:15:45.15:0,45,835	1/1:2,17:19:54.18:794,54,0	0/0:28,0:28:84.29:0,84,1550	1/1:3,25:28:81.24:1152,81,0	1/1:7,29:36:99:1480,102,0	1/1:0,18:18:51.17:750,51,0	1/1:1,29:30:75.25:1104,75,0	1/1:6,22:26:72.24:1057,72,0	1/1:7,9:16:45.11:616,45,0	1/1:3,12:15:39.13:574,39,0	1/1:6,26:31:65.42:970,65,0	1/1:8,19:27:66.21:945,66,0	0/0:22,0:22:51.17:0,51,954	0/0:20,0:20:60.18:0,60,1090	1/1:3,14:17:48.16:705,48,0	1/1:2,22:24:13.01:915,13,0	1/1:1,23:24:69.23:1015,69,0	1/1:0,10:10:30.10:442,30,0
chr10	65208400	.	TAA	T	9626.04	PASS	AB=0.985;AC=37;AF=0.661;AN=56;BaseQRankSum=13.560;DP=637;FS=4.267;HRun=3;HaplotypeScore=160.4004;InbreedingCoeff=0.7641;MQ=83.82;MQ0=0;MQRankSum=-11.346;QD=20.35;ReadPosRankSum=6.247;VQSLOD=2.6974;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:38,0:38:30.36:636,30,0	1/1:8,0:8:23.78:170,24,0	0/0:21,0:21:62.80:0,63,1126	0/0:27,0:27:78.24:0,78,1391	0/0:16,0:16:48.16:0,48,927	1/1:20,0:20:56.52:423,57,0	1/1:23,0:23:30.20:325,30,0	1/1:5,25:30:84.25:1203,84,0	1/1:2,35:37:99:1535,102,0	0/0:31,0:31:93.29:0,93,1682	0/0:11,0:11:30.10:0,30,580	1/1:19,0:19:49.40:373,49,0	0/0:25,0:25:75.26:0,75,1441	1/1:28,0:28:56.32:578,56,0	1/1:30,0:30:19.41:506,19,0	1/1:20,0:20:56.50:425,56,0	1/1:26,0:26:47.51:486,48,0	0/1:26,0:24:5.11:348,0,5	0/1:17,0:17:30.06:243,0,30	1/1:12,0:12:15.83:231,16,0	1/1:40,0:39:16.88:521,17,0	0/1:20,1:21:46.14:256,0,46	0/0:16,0:16:44.78:0,45,806	0/0:17,0:17:51.17:0,51,978	1/1:18,0:18:44.57:334,45,0	1/1:29,0:29:9.58:448,10,0	1/1:26,0:26:43.63:478,44,0	1/1:5,0:5:14.81:106,15,0
chr10	65208402	.	AAC	A	17002.37	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=12.399;DP=636;FS=4.625;HRun=0;HaplotypeScore=134.5533;InbreedingCoeff=0.9969;MQ=84.52;MQ0=0;MQRankSum=-9.398;QD=36.49;ReadPosRankSum=3.334;VQSLOD=7.0106;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,37:38:99:1508,99,0	1/1:0,8:8:24.08:367,24,0	0/0:23,0:23:65.01:0,65,1176	0/0:26,0:26:72.21:0,72,1278	0/0:17,0:17:51.17:0,51,971	1/1:0,20:20:57.19:856,57,0	1/1:2,21:23:54.18:818,54,0	1/1:30,0:30:71.23:545,71,0	1/1:36,0:36:98.74:831,99,0	0/0:32,0:32:87.27:0,87,1634	0/0:12,0:12:33.11:0,33,624	1/1:1,18:19:54.17:798,54,0	0/0:25,0:25:75.26:0,75,1448	1/1:2,26:28:81.27:1221,81,0	1/1:2,28:30:78.26:1176,78,0	1/1:2,19:21:57.19:864,57,0	1/1:1,24:25:69.22:1026,69,0	1/1:2,22:23:54.18:821,54,0	1/1:1,14:15:42.14:640,42,0	1/1:0,12:12:33.11:505,33,0	1/1:2,36:37:90.75:1344,91,0	1/1:2,19:21:45.05:616,45,0	0/0:18,0:18:44.76:0,45,800	0/0:17,0:17:51.17:0,51,985	1/1:0,18:18:45.15:678,45,0	1/1:3,26:29:78.24:1154,78,0	1/1:2,24:26:66.22:1008,66,0	1/1:1,4:5:15.05:225,15,0
chr10	65208686	.	A	AC	18171.79	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-12.195;DP=601;FS=3.059;HRun=3;HaplotypeScore=55.3980;InbreedingCoeff=0.9959;MQ=84.00;MQ0=0;MQRankSum=-5.203;QD=36.64;ReadPosRankSum=2.397;VQSLOD=5.4869;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,31:31:81.27:1127,81,0	1/1:0,6:6:18.06:252,18,0	0/0:12,0:12:33.04:0,33,347	0/0:23,0:23:54.16:0,54,637	0/0:9,0:9:24.06:0,24,275	1/1:1,17:18:48.16:672,48,0	1/1:0,23:23:66.22:924,66,0	1/1:2,23:24:69.23:963,69,0	1/1:1,24:25:66.22:924,66,0	1/1:1,15:16:45.15:628,45,0	1/1:0,11:11:27.09:378,27,0	1/1:1,23:24:57.19:797,57,0	0/0:23,0:23:66.20:0,66,791	1/1:1,34:35:87.29:1218,87,0	1/1:1,23:24:66.22:924,66,0	1/1:0,24:23:63.21:882,63,0	1/1:1,38:39:99:1470,105,0	1/1:1,27:28:72.24:1008,72,0	1/1:0,15:15:45.08:586,45,0	1/1:1,11:12:33.11:445,33,0	1/1:4,62:66:99:2309,166,0	1/1:1,14:15:33.11:462,33,0	0/0:7,0:7:21.05:0,21,240	0/0:31,0:31:87.25:0,87,1030	1/1:0,20:20:51.17:713,51,0	1/1:1,17:18:51.14:693,51,0	1/1:0,9:9:21.07:294,21,0	1/1:0,12:12:36.12:504,36,0
chr10	65213291	.	GC	G	460.48	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.716;DP=609;FS=0.000;HRun=8;HaplotypeScore=65.7805;InbreedingCoeff=0.9839;MQ=76.41;MQ0=0;MQRankSum=-0.762;QD=13.54;ReadPosRankSum=-1.480;VQSLOD=3.0326;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:42.88:0,43,716	0/0:14,0:14:39.06:0,39,434	0/0:19,0:18:26.89:0,27,393	0/0:18,0:18:19.37:0,19,276	0/0:16,0:16:47.95:0,48,525	0/0:27,0:27:75.23:0,75,900	0/0:28,1:29:46.24:0,46,828	0/0:18,0:18:23.81:0,24,254	0/0:25,0:25:66.18:0,66,777	1/1:4,7:11:15.01:145,15,0	1/1:3,20:23:45.07:434,45,0	0/0:32,0:32:87.19:0,87,977	0/0:27,0:27:72.20:0,72,844	0/0:32,0:32:93.24:0,93,1079	0/0:25,0:25:69.21:0,69,832	0/0:27,0:27:75.23:0,75,904	0/0:22,1:23:37.08:0,37,700	0/0:19,0:19:56.90:0,57,653	0/0:21,0:21:42.08:0,42,470	0/0:18,0:18:45.12:0,45,522	0/0:54,0:54:99:0,145,1692	0/0:14,0:14:33.08:0,33,374	0/0:10,0:10:26.82:0,27,301	0/0:27,0:27:63.19:0,63,759	0/0:16,0:16:33.09:0,33,388	0/0:19,0:19:48.08:0,48,561	0/0:15,0:15:39.12:0,39,471	0/0:7,0:7:21.06:0,21,254
chr10	65217682	.	C	CAG	2072	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-2.134;DP=768;FS=5.841;HRun=0;HaplotypeScore=93.8363;InbreedingCoeff=0.9985;MQ=84.23;MQ0=0;MQRankSum=-1.718;QD=48.19;ReadPosRankSum=-0.420;VQSLOD=4.5022;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,120,1698	0/0:14,0:14:39.13:0,39,559	0/0:27,0:27:75.23:0,75,1025	0/0:19,0:19:38.10:0,38,520	0/0:20,0:20:60.20:0,60,859	0/0:16,0:16:45.15:0,45,645	0/0:32,0:32:90.25:0,90,1231	0/0:27,0:27:66.22:0,66,941	0/0:29,0:29:87.28:0,87,1226	1/1:0,27:28:81.28:1479,81,0	1/1:1,14:15:39.13:715,39,0	0/0:30,0:30:87.27:0,87,1224	0/0:32,0:32:90.27:0,90,1250	0/0:27,0:27:78.23:0,78,1076	0/0:28,0:28:81.27:0,81,1160	0/0:29,0:29:78.25:0,78,1100	0/0:44,0:44:99:0,129,1830	0/0:27,0:27:75.25:0,75,1064	0/0:31,0:31:78.25:0,78,1101	0/0:27,0:27:69.23:0,69,988	0/0:38,0:38:99:0,111,1587	0/0:25,0:25:72.24:0,72,1032	0/0:34,0:34:99:0,99,1400	0/0:44,0:44:99:0,132,1871	0/0:13,0:13:36.11:0,36,498	0/0:27,1:28:23.27:0,23,1004	0/0:20,0:20:60.17:0,60,836	0/0:17,0:17:45.15:0,45,645
chr10	65219990	.	T	TGCATACTGAACTATATGAACATCTGC	7743.43	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=1.627;DP=797;FS=19.881;HRun=0;HaplotypeScore=496.3760;InbreedingCoeff=0.7782;MQ=74.08;MQ0=0;MQRankSum=-7.661;QD=101.89;ReadPosRankSum=0.289;VQSLOD=3.3183;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,147,8547	0/0:16,0:16:42.13:0,42,2379	0/0:25,0:23:63.10:0,63,1851	0/0:25,0:24:64.57:0,65,1850	0/0:29,0:29:81.24:0,81,4708	0/0:27,0:27:78.27:0,78,5013	0/0:33,0:33:96.33:0,96,4943	0/0:38,0:38:99:0,105,5354	0/0:26,0:26:72.23:0,72,4321	1/1:14,3:29:69.15:5915,69,0	1/1:5,2:15:21.07:1605,21,0	0/0:31,0:31:87.30:0,87,5215	0/0:40,0:40:99:0,120,6725	0/0:28,0:28:81.23:0,81,4070	0/0:36,0:36:99:0,102,5739	0/0:45,0:45:99:0,126,6952	0/0:29,0:29:84.26:0,84,4709	0/0:14,0:14:42.14:0,42,2344	0/0:24,0:24:72.20:0,72,3548	0/0:19,0:19:54.16:0,54,2750	0/0:37,0:37:99:0,105,4900	0/0:15,0:15:39.12:0,39,2028	0/0:16,0:16:45.14:0,45,2056	0/0:48,0:48:99:0,141,8192	0/0:28,0:28:81.24:0,81,4855	0/1:32,0:32:99:223,0,4980	0/0:28,0:28:78.25:0,78,4470	0/0:11,0:11:33.10:0,33,2131
chr10	65220236	.	C	CTTT	397.36	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=1.601;DP=620;FS=3.828;HRun=12;HaplotypeScore=98.3722;InbreedingCoeff=0.8431;MQ=63.99;MQ0=1;MQRankSum=1.308;QD=12.42;ReadPosRankSum=-2.580;VQSLOD=1.2324;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:93.52:0,94,1028	0/0:8,0:9:20.67:0,21,198	0/0:16,0:10:11.16:0,11,106	0/1:10,0:7:0.32:0,0,32	0/0:30,0:30:49.13:0,49,550	0/0:24,0:24:53.96:0,54,574	0/0:23,0:23:57.05:0,57,639	0/0:50,0:50:99:0,111,1245	0/0:17,0:17:32.99:0,33,370	1/1:7,2:11:16.55:185,17,0	1/1:4,7:9:18.06:329,18,0	0/0:22,0:23:57.02:0,57,623	0/0:18,0:19:38.88:0,39,421	0/0:22,0:22:49.53:0,50,542	0/0:26,0:26:63.05:0,63,707	0/0:21,0:23:49.37:0,49,525	0/0:21,0:21:53.98:0,54,593	0/0:27,0:27:63.05:0,63,707	0/0:30,0:29:81.20:0,81,887	0/0:19,0:19:48.02:0,48,538	0/0:14,0:14:30.02:0,30,326	0/0:14,0:14:39.08:0,39,437	0/0:23,0:24:51:0,51,572	0/0:21,0:21:50.76:0,51,548	0/0:23,0:24:50.84:0,51,551	0/0:29,0:29:84.21:0,84,924	0/0:24,0:26:46.44:0,46,521	0/0:19,0:19:16.05:0,16,472
chr10	65221320	.	G	GGT	2944.85	PASS	AB=0.920;AC=5;AF=0.089;AN=56;BaseQRankSum=-7.442;DP=704;FS=17.425;HRun=0;HaplotypeScore=85.1205;InbreedingCoeff=0.7803;MQ=80.37;MQ0=0;MQRankSum=-2.605;QD=38.24;ReadPosRankSum=-0.198;VQSLOD=3.9233;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,150,2240	0/0:13,0:13:39.13:0,39,597	0/0:19,0:20:36.99:0,37,673	0/0:19,0:19:42.99:0,43,578	0/0:29,0:29:81.27:0,81,1234	0/0:20,0:20:60.20:0,60,918	0/0:25,0:25:75.25:0,75,1147	0/0:29,0:29:87.29:0,87,1313	0/0:22,0:22:63.19:0,63,940	1/1:2,31:33:96.32:1812,96,0	1/1:0,21:21:63.22:1216,63,0	0/0:24,0:24:72.24:0,72,1096	0/0:37,0:37:99:0,108,1633	0/0:20,0:20:60.20:0,60,917	0/0:27,0:27:78.26:0,78,1195	0/0:27,0:27:81.26:0,81,1218	0/0:29,0:29:84.29:0,84,1286	0/0:18,0:18:48.16:0,48,735	0/0:22,0:22:60.20:0,60,918	0/0:24,0:24:69.23:0,69,1057	0/0:30,0:30:87.30:0,87,1329	0/0:27,0:27:78.26:0,78,1194	0/0:26,0:26:75.21:0,75,1102	0/0:27,0:27:81.25:0,81,1218	0/0:20,0:20:60.20:0,60,916	0/1:21,2:23:46.72:47,0,872	0/0:29,0:29:84.29:0,84,1284	0/0:13,0:13:39.12:0,39,575
chr10	65222047	.	TA	T	1363.32	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.978;DP=646;FS=11.878;HRun=5;HaplotypeScore=62.3961;InbreedingCoeff=0.9989;MQ=83.39;MQ0=0;MQRankSum=-1.133;QD=29.01;ReadPosRankSum=1.132;VQSLOD=3.2376;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,105,1311	0/0:11,0:11:30.09:0,30,394	0/0:17,0:17:44.27:0,44,549	0/0:21,0:21:54.06:0,54,667	0/0:30,0:30:87.27:0,87,1160	0/0:21,0:21:54.18:0,54,739	0/0:32,0:32:93.27:0,93,1231	0/0:23,0:23:60.15:0,60,749	0/0:20,0:20:57.17:0,57,763	1/1:2,32:34:96.25:1077,96,0	1/1:1,12:13:36.10:408,36,0	0/0:28,0:28:81.26:0,81,1083	0/0:24,0:24:72.22:0,72,954	0/0:17,0:17:48.16:0,48,652	0/0:32,0:32:93.30:0,93,1257	0/0:16,0:16:45.14:0,45,601	0/0:32,0:32:93.27:0,93,1236	0/0:32,0:31:96.31:0,96,1297	0/0:24,0:24:60.20:0,60,821	0/0:19,0:19:54.18:0,54,737	0/0:33,0:33:87.25:0,87,1140	0/0:15,0:15:45.15:0,45,612	0/0:15,0:15:42.13:0,42,557	0/0:24,0:24:69.22:0,69,927	0/0:23,0:23:66.15:0,66,843	0/0:22,1:23:32.18:0,32,828	0/0:23,0:23:66.21:0,66,886	0/0:9,0:9:27.07:0,27,352
chr10	65223681	.	C	CAGAG	2434.63	PASS	AB=0.851;AC=33;AF=0.635;AN=52;BaseQRankSum=0.606;DP=732;FS=6.272;HRun=0;HaplotypeScore=137.6397;InbreedingCoeff=0.1273;MQ=63.34;MQ0=16;MQRankSum=-1.272;QD=4.78;ReadPosRankSum=-2.908;VQSLOD=1.6070;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:23,13:41:49.27:62,0,49	1/1:7,0:12:8.57:113,9,0	./.	./.	0/0:12,0:17:2.31:0,2,27	1/1:21,2:22:9.03:190,9,0	1/1:18,7:26:7.92:103,8,0	0/0:18,0:21:1.95:0,2,8	0/1:16,0:22:6.45:6,0,22	1/1:23,0:23:5.98:70,6,0	0/1:18,0:18:0:0,0,0	1/1:15,9:28:11.51:166,12,0	0/0:24,0:26:26.14:0,26,302	1/1:10,7:19:3.01:71,3,0	0/1:17,2:32:25.46:270,0,25	1/1:18,0:25:8.05:71,8,0	1/1:12,1:28:17.25:223,17,0	0/1:9,14:24:23.18:412,0,23	0/1:16,0:16:34.88:67,0,35	0/1:20,0:20:31.39:77,0,31	0/1:33,0:33:18.02:117,0,18	1/1:32,0:32:26.98:299,27,0	0/0:19,0:19:5.75:0,6,87	0/0:39,0:40:44.46:0,44,574	1/1:9,1:16:5.75:83,6,0	1/1:19,0:27:15.10:90,15,0	0/1:20,0:22:72.64:88,0,73	1/1:15,0:14:5.06:16,5,0
chr10	65223855	.	A	AAGAGGGAGAG	1296.99	PASS	AB=1.000;AC=8;AF=0.143;AN=56;BaseQRankSum=0.730;DP=635;FS=7.206;HRun=0;HaplotypeScore=192.2029;InbreedingCoeff=0.3803;MQ=63.70;MQ0=11;MQRankSum=-4.277;QD=9.33;ReadPosRankSum=-2.245;VQSLOD=1.4500;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:78.18:0,78,1836	0/0:1,0:1:3.01:0,3,94	0/0:51,0:33:34.87:0,35,826	0/1:66,0:32:12.69:13,0,463	0/0:15,0:15:33.11:0,33,803	0/0:21,0:21:54.16:0,54,1345	0/0:31,0:31:60.97:0,61,1339	0/0:27,0:27:45.11:0,45,903	0/0:8,0:8:21:0,21,415	1/1:5,12:18:36.05:1162,36,0	1/1:5,11:16:9.03:111,9,0	0/0:16,0:16:42.09:0,42,1152	0/0:24,0:24:58.02:0,58,1354	0/0:17,0:17:47.82:0,48,1186	0/0:28,0:28:57.14:0,57,1255	0/0:20,0:20:50.38:0,50,1355	0/0:33,0:32:69.12:0,69,1611	0/0:20,0:20:51.11:0,51,1189	0/0:14,0:14:21.01:0,21,383	0/0:15,0:15:33.10:0,33,787	0/0:46,0:47:99:0,106,2278	0/0:11,0:11:24.05:0,24,570	0/0:11,0:11:27.03:0,27,646	0/0:36,0:36:81.20:0,81,2052	0/0:17,0:17:36.05:0,36,762	0/1:14,0:14:90.46:90,0,489	0/1:19,0:18:7.67:8,0,856	0/1:6,0:6:53.38:53,0,145
chr10	65224451	.	AC	A	4667.58	PASS	AB=0.870;AC=44;AF=0.786;AN=56;BaseQRankSum=-0.023;DP=501;FS=18.352;HRun=11;HaplotypeScore=61.6633;InbreedingCoeff=0.2365;MQ=74.10;MQ0=0;MQRankSum=-0.046;QD=9.62;ReadPosRankSum=3.739;VQSLOD=2.0963;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:13,12:25:5.37:173,5,0	1/1:5,6:11:17.95:148,18,0	0/0:9,0:9:5.37:0,5,39	0/0:7,0:7:2.17:0,2,45	0/1:10,1:11:0.65:1,0,160	1/1:18,6:25:1.38:150,1,0	1/1:7,15:26:20.15:318,20,0	0/1:11,3:14:10.73:40,0,11	0/1:9,2:11:0.61:1,0,184	1/1:9,9:18:31.97:251,32,0	0/1:5,0:6:7.47:22,0,7	1/1:13,15:28:38.94:360,39,0	0/1:19,1:20:37.77:38,0,217	1/1:11,9:24:47.07:342,47,0	1/1:5,17:22:44.93:369,45,0	1/1:4,13:17:35.94:296,36,0	1/1:10,14:26:37.96:301,38,0	1/1:7,20:30:66.03:509,66,0	1/1:9,1:16:26.77:142,27,0	1/1:7,5:12:16.43:94,16,0	1/1:24,9:35:34.49:352,34,0	0/1:3,3:6:6.50:38,0,6	0/1:6,0:6:5.68:6,0,28	0/1:24,3:27:2.26:2,0,341	1/1:8,5:14:2.28:107,2,0	1/1:8,0:8:6.84:50,7,0	1/1:11,20:34:21.99:354,22,0	1/1:4,8:13:26:203,26,0
chr10	65225345	.	C	CT	553.16	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.358;DP=610;FS=11.795;HRun=0;HaplotypeScore=64.9241;InbreedingCoeff=0.9794;MQ=78.98;MQ0=0;MQRankSum=-2.715;QD=21.28;ReadPosRankSum=0.066;VQSLOD=4.5795;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:99:0,99,1383	0/0:9,0:9:27.08:0,27,358	0/0:19,0:19:57.16:0,57,766	0/0:11,0:11:30.10:0,30,418	0/0:10,0:10:27.07:0,27,359	0/0:21,0:21:60.20:0,60,839	0/0:20,0:20:60.16:0,60,787	0/0:22,0:22:60.19:0,60,809	0/0:22,0:22:66.22:0,66,917	1/1:3,12:15:39.25:505,39,0	1/1:2,9:11:11.99:165,12,0	0/0:41,0:41:99:0,117,1603	0/0:39,0:39:99:0,117,1602	0/0:26,0:26:78.25:0,78,1076	0/0:24,0:23:72.23:0,72,990	0/0:28,0:28:84.26:0,84,1144	0/0:30,0:30:90.22:0,90,1185	0/0:23,0:23:66.15:0,66,866	0/0:25,0:25:75.24:0,75,1026	0/0:10,0:10:30.10:0,30,419	0/0:47,0:47:99:0,138,1827	0/0:12,0:12:36.12:0,36,503	0/0:17,0:17:51.17:0,51,711	0/0:24,0:24:72.24:0,72,1006	0/0:21,0:21:63.20:0,63,865	0/0:21,1:22:20.10:0,20,746	0/0:17,0:16:51.14:0,51,678	0/0:11,0:11:32.69:0,33,414
chr10	65225347	.	CAG	C	660.88	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.635;DP=614;FS=10.796;HRun=0;HaplotypeScore=77.7520;InbreedingCoeff=0.9900;MQ=80.12;MQ0=0;MQRankSum=-2.202;QD=25.42;ReadPosRankSum=-0.182;VQSLOD=4.0399;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:99:0,99,1975	0/0:9,0:9:27.09:0,27,531	0/0:19,0:19:57.20:0,57,1120	0/0:13,0:13:35.78:0,36,609	0/0:10,0:10:27.09:0,27,537	0/0:22,0:22:62.94:0,63,1248	0/0:19,0:19:57.20:0,57,1138	0/0:22,0:22:66.23:0,66,1304	0/0:22,0:22:66.23:0,66,1316	1/1:0,12:15:44.93:581,45,0	1/1:0,9:11:17.87:199,18,0	0/0:41,0:41:99:0,120,2339	0/0:41,0:41:99:0,120,2363	0/0:28,0:28:84.26:0,84,1619	0/0:25,0:24:75.26:0,75,1477	0/0:28,0:28:84.29:0,84,1677	0/0:29,0:29:87.30:0,87,1710	0/0:22,0:22:66.23:0,66,1264	0/0:24,0:24:69.22:0,69,1292	0/0:10,0:10:30.10:0,30,600	0/0:46,0:46:99:0,135,2635	0/0:12,0:12:36.12:0,36,719	0/0:18,0:18:54.19:0,54,1056	0/0:25,0:25:75.25:0,75,1454	0/0:21,0:21:63.22:0,63,1258	0/0:20,1:21:18.15:0,18,1137	0/0:17,0:16:51.17:0,51,1006	0/0:11,0:11:33.11:0,33,632
chr10	65225357	.	A	AC	184.16	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-2.066;DP=649;FS=1.313;HRun=5;HaplotypeScore=69.8568;InbreedingCoeff=0.9785;MQ=81.02;MQ0=0;MQRankSum=-1.736;QD=18.42;ReadPosRankSum=-0.318;VQSLOD=3.1531;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,111,1173	0/0:9,0:9:24.06:0,24,257	0/0:19,0:19:24.72:0,25,450	0/0:16,0:16:20.86:0,21,325	1/1:0,10:10:21.07:276,21,0	0/0:26,0:26:69.15:0,69,733	0/0:21,0:21:63.14:0,63,668	0/0:25,0:25:66.16:0,66,710	0/0:27,0:27:78.18:0,78,829	0/0:16,0:16:39.09:0,39,413	0/0:11,0:11:18.04:0,18,193	0/0:42,0:42:99:0,114,1225	0/0:39,0:39:99:0,111,1192	0/0:28,0:28:78.17:0,78,829	0/0:25,0:24:69.17:0,69,742	0/0:24,0:24:69.15:0,69,733	0/0:33,0:33:96.22:0,96,1021	0/0:25,0:25:66.14:0,66,699	0/0:22,0:22:57.14:0,57,612	0/0:13,0:13:36.09:0,36,386	0/0:52,0:52:99:0,147,1554	0/0:12,0:12:30.07:0,30,322	0/0:17,0:17:48.12:0,48,515	0/0:29,0:29:78.17:0,78,828	0/0:20,0:20:54.12:0,54,573	0/0:20,0:20:54.12:0,54,574	0/0:18,0:17:39.10:0,39,419	0/0:10,0:10:27.07:0,27,290
chr10	65231023	.	CAGAGAG	C	122.77	PASS	AB=0.905;AC=9;AF=0.214;AN=42;BaseQRankSum=3.126;DP=506;FS=16.214;HRun=0;HaplotypeScore=103.2657;InbreedingCoeff=0.2096;MQ=70.90;MQ0=8;MQRankSum=-0.948;QD=1.11;ReadPosRankSum=1.300;VQSLOD=0.7615;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:6.02:0,6,78	./.	./.	./.	./.	0/0:14,0:14:6.02:0,6,93	0/1:16,0:16:41.11:41,0,134	0/0:28,0:28:0.47:0,0,1	1/1:17,0:17:0.47:1,0,0	1/1:17,0:18:6.02:84,6,0	./.	0/0:14,0:14:9.13:0,9,139	0/0:13,0:13:9.03:0,9,196	0/0:19,0:19:12.04:0,12,183	0/1:18,4:23:14.79:92,0,15	1/1:17,0:20:1.77:3,2,0	0/0:20,1:21:12.51:0,13,170	0/0:15,0:15:8.46:0,8,138	0/0:21,0:20:6.49:0,6,92	./.	0/0:29,0:28:1.25:0,1,3	./.	0/0:11,0:11:3.01:0,3,42	0/0:32,0:32:24.08:0,24,519	0/0:11,0:11:2.74:0,3,12	0/0:14,0:14:6.02:0,6,101	0/1:15,2:17:1.94:2,0,81	0/0:12,0:11:2.97:0,3,20
chr10	65237506	.	AGGG	A	2345.89	PASS	AB=0.748;AC=31;AF=0.574;AN=54;BaseQRankSum=-0.006;DP=277;FS=0.000;HRun=14;HaplotypeScore=46.9454;InbreedingCoeff=0.4566;MQ=76.28;MQ0=0;MQRankSum=-1.960;QD=11.56;ReadPosRankSum=4.252;VQSLOD=-0.6249;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:17,8:25:25.02:122,0,25	1/1:1,2:3:3.44:36,3,0	0/0:10,0:10:17.99:0,18,213	0/0:10,0:9:5.86:0,6,62	0/0:4,0:4:3.01:0,3,41	1/1:3,6:10:14.92:157,15,0	1/1:6,17:27:44.73:456,45,0	1/1:5,5:13:21.71:195,22,0	0/0:10,0:10:24.06:0,24,314	./.	0/0:2,0:3:1.25:0,1,3	1/1:6,4:11:11.96:123,12,0	0/0:8,0:8:6.02:0,6,86	0/0:7,2:9:0.89:0,1,2	1/1:4,5:10:17.95:192,18,0	1/1:2,10:14:28.39:312,28,0	0/1:10,4:15:4.72:118,0,5	0/1:9,3:14:13.97:91,0,14	1/1:7,6:13:22.38:221,22,0	1/1:0,1:1:3.01:31,3,0	1/1:15,14:29:23.81:216,24,0	1/1:3,0:3:2.92:17,3,0	0/0:1,0:1:0:0,0,0	0/0:14,0:14:15.39:0,15,154	1/1:1,2:3:2.99:31,3,0	0/0:3,0:4:1.25:0,1,3	1/1:2,3:9:2.80:171,3,0	1/1:0,2:2:2.98:21,3,0
chr10	65237518	.	GGGC	G	771.29	PASS	AB=0.971;AC=16;AF=0.296;AN=54;BaseQRankSum=9.402;DP=263;FS=39.835;HRun=0;HaplotypeScore=48.9646;InbreedingCoeff=-0.3305;MQ=74.10;MQ0=0;MQRankSum=-4.346;QD=3.94;ReadPosRankSum=8.664;VQSLOD=0.0279;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:19,0:19:19.65:20,0,157	0/1:4,0:4:7.03:7,0,24	0/0:11,0:10:17.98:0,18,205	0/0:7,0:6:8.83:0,9,89	0/0:8,0:8:20.38:0,20,172	0/1:9,0:9:19.47:51,0,19	0/1:30,1:31:81.18:147,0,81	0/1:21,0:21:48.64:49,0,204	0/0:9,0:9:27.09:0,27,439	0/0:1,0:1:2.84:0,3,14	0/0:3,0:3:8.49:0,8,46	0/1:10,0:10:39.36:48,0,39	0/0:3,0:3:8.98:0,9,126	0/0:7,0:7:11.18:0,11,61	0/1:9,2:11:27.28:102,0,27	1/1:13,0:13:1.13:126,1,0	0/1:9,1:10:47.15:73,0,47	0/1:14,0:14:18.19:18,0,204	0/1:9,1:10:18.02:121,0,18	0/1:3,0:3:8.97:9,0,26	0/1:27,1:28:70.28:70,0,174	0/0:2,0:2:2.92:0,3,8	./.	0/0:6,0:6:11.99:0,12,162	0/1:3,0:3:11.88:12,0,13	0/0:6,0:6:16.84:0,17,100	0/1:10,0:10:19.28:65,0,19	0/0:4,0:4:1.40:0,1,30
chr10	65237854	.	C	CGCT	1074.31	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-2.064;DP=493;FS=15.386;HRun=0;HaplotypeScore=69.4013;InbreedingCoeff=0.8993;MQ=93.07;MQ0=0;MQRankSum=0.358;QD=46.71;ReadPosRankSum=-0.326;VQSLOD=4.4327;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:90.31:0,90,1496	0/0:12,0:12:33.11:0,33,550	0/0:26,0:26:63.19:0,63,982	0/0:30,0:30:70.28:0,70,1135	0/0:13,0:13:36.12:0,36,600	0/0:16,0:16:48.16:0,48,800	0/0:22,0:22:63.20:0,63,1023	0/0:15,0:15:45.15:0,45,727	0/0:14,0:14:39.13:0,39,648	1/1:3,12:17:45.08:853,45,0	1/1:1,5:6:15.05:339,15,0	0/0:12,0:12:36.12:0,36,600	0/0:10,0:10:24.08:0,24,400	0/0:19,0:19:57.15:0,57,919	0/0:11,0:11:30.10:0,30,500	0/0:21,0:21:60.19:0,60,964	0/0:38,0:38:99:0,111,1820	0/0:26,0:26:72.19:0,72,1143	0/0:24,0:24:63.22:0,63,1049	0/0:9,0:9:27.09:0,27,450	0/0:47,0:47:99:0,132,2132	0/0:7,0:7:18.06:0,18,300	0/0:10,0:10:30.10:0,30,500	0/0:19,0:18:57.19:0,57,939	0/0:6,0:6:18.06:0,18,300	0/0:13,0:13:39.13:0,39,639	0/0:19,0:17:54.18:0,54,899	0/0:1,0:1:3.01:0,3,50
chr10	65239533	.	GT	G	4863.35	PASS	AB=0.808;AC=37;AF=0.685;AN=54;BaseQRankSum=-2.069;DP=394;FS=16.963;HRun=12;HaplotypeScore=50.9484;InbreedingCoeff=0.6748;MQ=69.32;MQ0=1;MQRankSum=2.083;QD=14.78;ReadPosRankSum=2.069;VQSLOD=3.6909;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,25:31:65.21:506,65,0	./.	0/0:20,0:13:23.76:0,24,207	0/1:19,0:11:3.92:27,0,4	0/0:12,0:12:30.02:0,30,293	0/1:4,13:16:46.48:234,0,46	1/1:4,17:22:19.39:323,19,0	1/1:8,25:34:54.81:538,55,0	0/0:6,0:7:20.86:0,21,190	0/0:2,0:3:8.85:0,9,75	0/0:8,1:9:0.80:0,1,185	1/1:0,10:10:26.90:209,27,0	0/0:7,0:7:18.03:0,18,178	1/1:2,8:10:23.89:186,24,0	1/1:4,9:13:26.89:209,27,0	1/1:0,13:13:32.87:255,33,0	1/1:6,15:21:46.05:350,46,0	1/1:4,17:22:28.15:377,28,0	1/1:2,13:17:39.93:290,40,0	1/1:2,6:8:11.94:93,12,0	1/1:6,9:15:23.90:186,24,0	1/1:1,3:4:8.96:70,9,0	0/1:9,2:11:19.51:20,0,164	0/0:6,0:6:9.02:0,9,91	1/1:0,10:10:23.87:185,24,0	1/1:7,12:20:10.46:254,10,0	1/1:3,7:10:20.80:158,21,0	1/1:1,20:21:50.81:395,51,0
chr10	65241185	.	AGTGTGTGAGC	A	603.77	PASS	AB=0.688;AC=3;AF=0.054;AN=56;BaseQRankSum=5.573;DP=805;FS=1.238;HRun=0;HaplotypeScore=236.2703;InbreedingCoeff=0.8418;MQ=62.89;MQ0=0;MQRankSum=-4.480;QD=17.76;ReadPosRankSum=-1.449;VQSLOD=2.2993;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,129,5716	0/0:8,0:8:18.06:0,18,748	0/0:26,0:20:21.07:0,21,814	0/0:25,0:21:37.26:0,37,1155	0/0:13,0:13:39.13:0,39,1767	0/0:16,0:16:39.13:0,39,1696	0/0:46,0:46:99:0,102,4083	0/0:25,0:25:48.14:0,48,1690	0/0:26,0:26:66.19:0,66,2891	1/1:12,11:23:30.07:698,30,0	0/1:6,5:11:0:0,0,0	0/0:50,0:50:99:0,105,4533	0/0:26,0:26:65.90:0,66,2888	0/0:35,0:35:66.23:0,66,2783	0/0:36,0:36:96.32:0,96,4222	0/0:34,0:34:78.24:0,78,3223	0/0:42,0:41:96.31:0,96,3884	0/0:31,0:31:83.62:0,84,3350	0/0:26,0:26:54.12:0,54,2197	0/0:9,0:9:18.06:0,18,630	0/0:92,0:92:99:0,235,9875	0/0:13,0:13:27.09:0,27,1172	0/0:8,0:8:15.05:0,15,701	0/0:45,0:45:99:0,114,5230	0/0:23,0:23:51.11:0,51,2118	0/0:37,0:37:84.27:0,84,3341	0/0:14,0:14:27.09:0,27,1314	0/0:10,0:10:12.04:0,12,549
chr10	65241305	.	CGTGT	C	673.51	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.784;DP=905;FS=0.000;HRun=0;HaplotypeScore=145.3969;InbreedingCoeff=0.9566;MQ=54.20;MQ0=18;MQRankSum=-4.230;QD=16.43;ReadPosRankSum=-0.202;VQSLOD=3.0540;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:27:66.19:0,66,1509	0/0:9,0:9:24.08:0,24,565	0/0:20,0:6:12.01:0,12,168	0/0:41,0:8:11.62:0,12,142	0/0:24,0:24:72.23:0,72,1675	0/0:17,0:16:36.09:0,36,767	0/0:47,0:47:99:0,102,2449	0/0:24,0:20:50.97:0,51,989	0/0:35,0:35:83.93:0,84,1810	1/1:20,3:21:47.85:584,48,0	1/1:16,2:17:14.97:207,15,0	0/0:52,0:51:99:0,138,3271	0/0:28,0:28:75.19:0,75,1610	0/0:50,0:49:99:0,120,2754	0/0:24,0:24:66.19:0,66,1466	0/0:27,0:27:75.22:0,75,1701	0/0:39,0:38:99:0,102,2143	0/0:34,0:33:82.68:0,83,1852	0/0:20,0:16:42.14:0,42,984	0/0:13,0:13:39.10:0,39,946	0/0:184,0:176:99:0,448,9857	0/0:14,0:13:33.09:0,33,664	0/0:12,0:12:27.08:0,27,525	0/0:50,0:50:99:0,117,2791	0/0:21,0:20:51.12:0,51,927	0/0:30,0:27:45.81:0,46,1609	0/0:10,0:9:27.07:0,27,557	0/0:10,0:10:27.09:0,27,606
chr10	65241309	.	T	TGC	423.57	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.744;DP=892;FS=0.000;HRun=0;HaplotypeScore=115.0867;InbreedingCoeff=0.9619;MQ=54.16;MQ0=20;MQRankSum=-3.746;QD=11.45;ReadPosRankSum=-0.539;VQSLOD=2.7768;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:27:66.19:0,66,947	0/0:9,0:9:27.05:0,27,382	0/0:20,0:5:12.01:0,12,156	0/0:37,0:6:13.28:0,13,155	0/0:25,0:24:72.23:0,72,1073	0/0:17,0:16:36.07:0,36,506	0/0:50,0:49:99:0,111,1705	0/0:22,0:18:51.07:0,51,683	0/0:34,0:34:84.18:0,84,1201	1/1:11,9:18:47.40:392,47,0	1/1:8,9:16:14.88:150,15,0	0/0:53,0:52:99:0,138,2061	0/0:29,0:29:75.20:0,75,1060	0/0:48,0:46:99:0,120,1821	0/0:23,0:23:66.18:0,66,964	0/0:26,0:26:78.22:0,78,1123	0/0:40,0:39:99:0,108,1533	0/0:33,0:32:85.96:0,86,1215	0/0:19,0:15:42.11:0,42,615	0/0:13,0:13:39.05:0,39,564	0/0:187,0:178:99:0,462,6636	0/0:14,0:13:36.08:0,36,483	0/0:9,0:9:27.08:0,27,391	0/0:49,0:49:99:0,117,1782	0/0:20,0:19:53.96:0,54,668	0/0:29,1:27:52.79:0,53,1025	0/0:10,0:9:27.06:0,27,365	0/0:10,0:10:27.09:0,27,399
chr10	65241333	.	TGC	T	266.01	PASS	AB=0.786;AC=4;AF=0.071;AN=56;BaseQRankSum=7.808;DP=811;FS=10.636;HRun=0;HaplotypeScore=108.6847;InbreedingCoeff=0.6112;MQ=55.33;MQ0=21;MQRankSum=-4.336;QD=4.03;ReadPosRankSum=-2.835;VQSLOD=1.3061;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:26:59.49:0,59,1067	0/0:8,0:8:21.05:0,21,327	0/0:26,1:6:11.85:0,12,93	0/1:40,0:8:47.89:48,0,120	0/0:19,0:18:54.18:0,54,996	0/0:18,0:17:39.10:0,39,653	0/0:42,0:41:86.82:0,87,1734	0/0:22,0:20:54.07:0,54,784	0/0:34,0:34:90:0,90,1551	1/1:3,11:14:38.42:324,38,0	0/1:3,9:11:0:0,0,0	0/0:46,0:46:99:0,123,2046	0/0:25,0:25:64.71:0,65,1122	0/0:41,0:40:99:0,110,1816	0/0:21,0:21:63.21:0,63,1126	0/0:23,0:23:69.22:0,69,1234	0/0:35,0:34:96.17:0,96,1588	0/0:23,0:23:44.96:0,45,1077	0/0:21,1:20:51.77:0,52,679	0/0:14,0:14:36.07:0,36,617	0/0:178,0:169:99:0,414,7231	0/0:16,0:15:27.94:0,28,676	0/0:4,0:4:12.04:0,12,231	0/0:48,0:48:99:0,120,2102	0/0:12,0:12:29.79:0,30,566	0/0:26,1:24:24.46:0,24,1020	0/0:7,0:6:18.02:0,18,269	0/0:6,0:6:18.06:0,18,323
chr10	65241339	.	CGT	C	188.40	PASS	AB=0.964;AC=4;AF=0.074;AN=54;BaseQRankSum=6.129;DP=798;FS=3.064;HRun=0;HaplotypeScore=115.5400;InbreedingCoeff=0.3996;MQ=57.15;MQ0=15;MQRankSum=-3.261;QD=2.94;ReadPosRankSum=-0.082;VQSLOD=2.2927;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,1:26:25.70:0,26,884	0/0:8,0:8:6.02:0,6,99	0/0:25,0:7:20.95:0,21,226	0/1:35,0:12:7.29:7,0,225	0/0:20,0:19:42.14:0,42,681	0/0:20,0:19:26.79:0,27,415	0/0:44,0:43:99:0,99,1529	0/0:21,0:19:42.09:0,42,608	0/0:33,1:34:34.74:0,35,1091	1/1:7,9:16:10.67:270,11,0	./.	0/0:42,0:42:99:0,99,1568	0/0:21,0:21:47.83:0,48,753	0/0:35,0:34:72.19:0,72,1109	0/0:20,0:20:48.15:0,48,766	0/0:26,0:26:54.15:0,54,824	0/0:32,0:32:90.27:0,90,1421	0/0:23,0:23:57.14:0,57,880	0/0:24,0:23:60.19:0,60,939	0/0:13,0:13:30.10:0,30,489	0/0:174,3:171:99:0,269,5563	0/0:17,0:17:48.13:0,48,717	0/0:4,0:4:9.03:0,9,149	0/0:50,1:51:53.39:0,53,1842	0/1:12,1:13:10.28:10,0,369	0/0:23,1:22:11.66:0,12,650	0/0:7,0:7:21.05:0,21,319	0/0:6,0:6:12.02:0,12,172
chr10	65241433	.	T	TGC	9805.36	PASS	AB=0.536;AC=38;AF=0.679;AN=56;BaseQRankSum=-8.065;DP=764;FS=0.000;HRun=0;HaplotypeScore=99.7175;InbreedingCoeff=0.7942;MQ=59.48;MQ0=11;MQRankSum=-0.552;QD=17.96;ReadPosRankSum=6.193;VQSLOD=4.7067;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,30:37:8.74:510,9,0	1/1:6,0:6:9.03:134,9,0	0/0:33,0:10:23.82:0,24,194	0/0:36,0:16:41.45:0,41,402	0/0:7,0:7:18.02:0,18,219	1/1:14,14:28:51.42:892,51,0	1/1:7,31:39:10.86:350,11,0	0/0:20,0:19:35.80:0,36,365	0/0:30,0:30:77.83:0,78,909	1/1:11,16:27:39.27:583,39,0	1/1:0,3:3:3.01:52,3,0	1/1:7,37:45:20.13:533,20,0	0/0:25,0:24:60.10:0,60,703	1/1:10,24:32:11.41:446,11,0	1/1:5,21:26:23.38:548,23,0	1/1:7,18:25:23.20:412,23,0	1/1:7,30:37:0.92:543,1,0	1/1:3,19:22:36.09:621,36,0	1/1:4,13:15:26.82:336,27,0	0/1:0,6:6:0:0,0,0	1/1:33,70:100:69.56:1907,70,0	1/1:4,13:17:11.69:176,12,0	0/0:13,0:13:27.04:0,27,312	0/0:54,0:54:99:0,127,1433	1/1:10,6:16:33.33:456,33,0	1/1:5,31:36:59.26:1002,59,0	0/1:3,9:11:13.83:46,0,14	1/1:1,7:8:15.05:258,15,0
chr10	65243395	.	TCAGATCCAAA	T	790.81	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.347;DP=799;FS=0.998;HRun=0;HaplotypeScore=232.9491;InbreedingCoeff=0.9694;MQ=91.05;MQ0=0;MQRankSum=-5.733;QD=26.36;ReadPosRankSum=-1.910;VQSLOD=2.9020;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,102,4943	0/0:4,0:4:12.04:0,12,461	0/0:34,0:34:81.17:0,81,3180	0/0:33,0:33:66.18:0,66,2785	0/0:15,0:15:39.13:0,39,1985	0/0:25,0:25:63.19:0,63,2731	0/0:42,0:42:99:0,108,5031	0/0:36,0:36:93.31:0,93,3670	0/0:26,0:26:57.19:0,57,2698	1/1:3,10:13:30.04:737,30,0	1/1:2,15:17:12.99:170,13,0	0/0:40,0:40:99:0,108,4849	0/0:25,0:25:66.23:0,66,3221	0/0:37,0:37:96.33:0,96,4403	0/0:47,0:47:99:0,114,5535	0/0:34,0:34:96.33:0,96,4824	0/0:38,0:38:99:0,102,4659	0/0:30,0:30:75.26:0,75,3611	0/0:20,0:20:48.16:0,48,2278	0/0:12,0:12:33.10:0,33,1423	0/0:65,0:65:99:0,175,8337	0/0:18,0:18:45.15:0,45,2095	0/0:11,0:11:24.08:0,24,1229	0/0:49,0:49:99:0,120,5763	0/0:19,0:19:48.16:0,48,2072	0/0:33,0:33:81.25:0,81,3794	0/0:24,0:24:69.22:0,69,3377	0/0:9,0:9:27.09:0,27,1278
chr10	65243826	.	GA	G	1512.27	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.589;DP=915;FS=5.651;HRun=1;HaplotypeScore=90.4467;InbreedingCoeff=0.9998;MQ=90.95;MQ0=0;MQRankSum=-2.812;QD=30.25;ReadPosRankSum=-1.210;VQSLOD=2.8570;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,108,1726	0/0:13,0:13:39.09:0,39,570	0/0:33,0:33:99:0,99,1510	0/0:40,0:40:99:0,114,1735	0/0:25,0:25:75.22:0,75,1146	0/0:22,0:21:66.19:0,66,1004	0/0:37,0:37:99:0,111,1771	0/0:32,0:32:96.31:0,96,1492	0/0:50,0:50:99:0,147,2269	1/1:0,27:27:78.19:1005,78,0	1/1:0,23:23:45.15:629,45,0	0/0:52,0:52:99:0,157,2491	0/0:44,0:44:99:0,132,2074	0/0:37,0:37:99:0,111,1731	0/0:29,0:29:87.27:0,87,1346	0/0:40,0:40:99:0,120,1915	0/0:39,0:39:99:0,117,1836	0/0:30,0:30:90.31:0,90,1431	0/0:20,0:20:60.20:0,60,935	0/0:21,0:21:60.19:0,60,932	0/0:68,0:68:99:0,205,3210	0/0:26,0:26:78.27:0,78,1246	0/0:27,0:27:81.25:0,81,1247	0/0:40,0:40:99:0,114,1791	0/0:27,0:27:81.25:0,81,1256	0/0:35,1:36:66.19:0,66,1602	0/0:29,0:29:87.30:0,87,1387	0/0:11,0:11:33.10:0,33,506
chr10	65244807	.	GGTCACAGGCAGGGAAA	G	4400.66	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.788;DP=761;FS=9.445;HRun=0;HaplotypeScore=322.8562;InbreedingCoeff=0.9997;MQ=91.58;MQ0=0;MQRankSum=-8.115;QD=84.63;ReadPosRankSum=2.233;VQSLOD=3.5254;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,99,7054	0/0:11,0:11:33.11:0,33,2185	0/0:31,0:30:75.24:0,75,4334	0/0:33,0:33:63.22:0,63,3944	0/0:28,0:28:75.24:0,75,4398	0/0:31,0:31:84.27:0,84,6092	0/0:28,0:28:78.25:0,78,5517	0/0:35,0:35:93.31:0,93,5513	0/0:26,0:26:72.25:0,72,5456	1/1:14,17:31:51.16:2082,51,0	1/1:3,18:21:51.18:2319,51,0	0/0:25,0:25:63.22:0,63,4726	0/0:34,0:34:99:0,99,6914	0/0:25,0:25:66.21:0,66,4625	0/0:32,0:32:84.29:0,84,6154	0/0:29,0:29:72.23:0,72,4601	0/0:24,0:24:69.24:0,69,4992	0/0:22,0:22:51.15:0,51,3370	0/0:16,0:16:33.11:0,33,2170	0/0:30,0:30:84.29:0,84,5030	0/0:17,0:17:45.15:0,45,3137	0/0:29,0:29:81.28:0,81,5119	0/0:22,0:22:51.16:0,51,3147	0/0:27,0:27:69.24:0,69,5317	0/0:17,0:17:39.13:0,39,2341	0/0:34,0:34:96.32:0,96,5946	0/0:41,0:41:99:0,108,6929	0/0:22,0:22:66.23:0,66,5107
chr10	65245848	.	T	TTGC	1339.59	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.994;DP=574;FS=2.798;HRun=0;HaplotypeScore=87.4244;InbreedingCoeff=0.9828;MQ=71.70;MQ0=0;MQRankSum=-6.366;QD=46.19;ReadPosRankSum=-2.069;VQSLOD=5.0270;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:90.25:0,90,1406	0/0:10,0:10:27.09:0,27,435	0/0:6,0:6:18.06:0,18,284	0/0:13,0:13:36.09:0,36,530	0/0:17,0:17:45.14:0,45,712	0/0:15,0:15:42.11:0,42,611	0/0:26,0:26:75.23:0,75,1177	0/0:20,0:20:57.19:0,57,929	0/0:25,0:25:75.23:0,75,1175	1/1:3,17:21:54.14:1155,54,0	1/1:0,8:8:15.05:303,15,0	0/0:30,0:30:87.30:0,87,1414	0/0:25,0:25:69.20:0,69,1077	0/0:33,0:33:96.26:0,96,1449	0/0:21,0:21:60.20:0,60,973	0/0:24,0:24:69.24:0,69,1123	0/0:30,0:30:84.29:0,84,1368	0/0:16,0:16:45.14:0,45,710	0/0:19,0:19:51.04:0,51,799	0/0:15,0:15:45.14:0,45,710	0/0:53,0:53:99:0,145,2304	0/0:17,0:17:48.14:0,48,774	0/0:16,0:16:45.15:0,45,734	0/0:14,0:14:36.08:0,36,535	0/0:19,0:19:54.15:0,54,827	0/0:28,0:28:78.27:0,78,1270	0/0:16,0:15:45.15:0,45,734	0/0:6,0:6:18.04:0,18,267
chr10	65249115	.	GAC	G	505.14	PASS	AB=0.880;AC=16;AF=0.296;AN=54;BaseQRankSum=4.865;DP=754;FS=0.571;HRun=0;HaplotypeScore=96.0318;InbreedingCoeff=-0.2459;MQ=49.64;MQ0=88;MQRankSum=-1.972;QD=1.41;ReadPosRankSum=1.359;VQSLOD=1.5462;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:39,3:36:14.29:14,0,367	0/0:11,0:10:18.06:0,18,262	./.	0/0:47,0:7:0:0,0,0	0/0:24,2:24:20.22:0,20,354	0/0:16,0:13:18.05:0,18,218	0/1:19,3:20:53.34:53,0,224	1/1:22,0:9:1.87:31,2,0	0/1:17,3:19:28.57:29,0,140	0/1:12,0:9:1.81:2,0,67	0/0:5,0:4:3:0,3,25	0/0:37,1:38:8.61:0,9,760	0/0:24,0:24:36.11:0,36,505	0/1:18,5:22:55.56:56,0,252	0/1:21,1:19:0.28:0,0,382	0/0:35,1:35:20.81:0,21,698	0/1:37,6:42:90.17:90,0,846	0/1:17,7:23:91.39:91,0,383	0/0:16,0:11:18.03:0,18,248	0/1:15,1:15:32.44:32,0,114	0/0:83,0:77:91.32:0,91,1239	0/0:23,0:21:14.95:0,15,252	0/1:13,3:14:9.28:9,0,280	0/0:34,1:36:8.03:0,8,806	0/1:24,1:24:0.29:0,0,399	0/1:16,5:18:99:116,0,225	0/1:28,2:29:38.73:39,0,425	0/1:14,4:17:82.17:82,0,532
chr10	65249188	.	A	AC	296.58	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=2.505;DP=554;FS=1.351;HRun=4;HaplotypeScore=71.6132;InbreedingCoeff=0.6570;MQ=45.52;MQ0=159;MQRankSum=-0.435;QD=12.36;ReadPosRankSum=0.221;VQSLOD=1.5805;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:24:38.97:0,39,430	0/0:5,0:4:9.02:0,9,99	0/0:13,0:5:6.02:0,6,68	0/0:14,0:1:3:0,3,25	0/0:12,0:11:24.07:0,24,272	0/0:20,0:17:27.03:0,27,305	0/0:13,0:11:24.07:0,24,272	0/0:21,0:13:33.09:0,33,374	0/0:20,0:16:21.03:0,21,238	1/1:1,15:9:21.07:287,21,0	1/1:0,8:6:9.03:122,9,0	0/0:24,0:19:14.82:0,15,170	0/0:23,0:18:36.05:0,36,394	0/0:18,0:13:24.05:0,24,262	0/0:26,0:13:24.07:0,24,272	0/0:29,0:25:39.06:0,39,442	0/0:34,0:28:42.10:0,42,467	0/0:24,0:17:27.08:0,27,306	0/0:20,0:9:18.05:0,18,204	0/0:12,0:6:15.04:0,15,170	0/0:47,0:33:51.13:0,51,568	0/0:15,0:11:18.05:0,18,203	0/0:8,0:5:2.99:0,3,34	0/0:31,0:21:30.08:0,30,338	0/0:13,0:9:18.05:0,18,204	0/0:20,1:17:1.36:0,1,400	0/0:27,0:21:42.09:0,42,463	0/0:11,0:11:15.04:0,15,169
chr10	65249436	.	C	CTGGGGGTGG	439.17	PASS	AC=4;AF=0.182;AN=22;BaseQRankSum=3.043;DP=435;FS=0.000;HRun=0;HaplotypeScore=77.1532;InbreedingCoeff=0.6960;MQ=23.44;MQ0=307;MQRankSum=-2.298;QD=43.92;ReadPosRankSum=1.091;VQSLOD=2.9400;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	0/0:7,0:6:12.04:0,12,391	./.	0/0:7,0:2:3.01:0,3,53	0/0:18,0:15:15.05:0,15,489	./.	./.	./.	./.	1/1:3,3:4:9.03:399,9,0	1/1:1,3:3:3.01:130,3,0	./.	./.	./.	./.	./.	./.	./.	./.	0/0:27,0:26:48.16:0,48,1501	./.	0/0:23,0:17:15.05:0,15,489	0/0:12,0:12:21.07:0,21,684	./.	0/0:27,0:26:48.16:0,48,1340	0/0:13,0:8:24.08:0,24,723	./.	0/0:11,0:6:9.03:0,9,293
chr10	65249437	.	A	AC	155.62	PASS	AC=4;AF=0.182;AN=22;BaseQRankSum=4.614;DP=442;FS=0.000;HRun=3;HaplotypeScore=67.0558;InbreedingCoeff=0.7334;MQ=23.41;MQ0=310;MQRankSum=-2.067;QD=10.37;ReadPosRankSum=-0.645;VQSLOD=0.8260;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	0/0:7,0:6:12.04:0,12,167	./.	0/0:7,0:2:2.98:0,3,22	0/0:18,0:15:15.05:0,15,209	./.	./.	./.	./.	1/1:7,3:8:23.98:224,24,0	1/1:2,3:4:3:27,3,0	./.	./.	./.	./.	./.	./.	./.	./.	0/0:27,0:26:48.16:0,48,663	./.	0/0:22,0:16:15.05:0,15,209	0/0:12,0:12:21.07:0,21,293	./.	0/0:27,0:26:48.16:0,48,656	0/0:14,0:8:24.08:0,24,331	./.	0/0:9,0:6:9.03:0,9,126
chr10	65249902	.	A	AT	1705.14	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=10.727;DP=712;FS=6.630;HRun=3;HaplotypeScore=79.4525;InbreedingCoeff=0.9841;MQ=75.80;MQ0=0;MQRankSum=-4.808;QD=37.89;ReadPosRankSum=1.790;VQSLOD=4.0607;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,144,1727	0/0:11,0:11:33.10:0,33,394	0/0:19,0:19:48.14:0,48,560	0/0:30,0:30:84.21:0,84,953	0/0:24,0:24:69.19:0,69,815	0/0:20,0:20:51.14:0,51,600	0/0:29,0:29:81.23:0,81,960	0/0:25,0:25:60.16:0,60,693	0/0:14,0:14:42.13:0,42,504	1/1:0,28:28:84.27:1160,84,0	1/1:2,15:17:48.16:667,48,0	0/0:43,0:43:99:0,123,1463	0/0:20,0:20:60.18:0,60,720	0/0:30,0:30:81.23:0,81,960	0/0:30,0:30:84.26:0,84,1008	0/0:41,0:41:99:0,117,1404	0/0:33,0:33:96.28:0,96,1141	0/0:17,0:17:48.15:0,48,576	0/0:20,0:20:51.15:0,51,603	0/0:27,0:27:78.21:0,78,919	0/0:43,0:43:99:0,129,1499	0/0:17,0:17:39.12:0,39,467	0/0:14,0:14:36.11:0,36,432	0/0:36,0:36:87.26:0,87,1043	0/0:22,0:22:60.15:0,60,704	0/0:28,1:29:39.23:0,39,894	0/0:21,0:20:48.15:0,48,575	0/0:4,0:4:12.04:0,12,144
chr10	65251326	.	ATT	A	849.02	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.369;DP=563;FS=8.665;HRun=11;HaplotypeScore=76.4363;InbreedingCoeff=0.9884;MQ=67.42;MQ0=0;MQRankSum=1.123;QD=18.06;ReadPosRankSum=1.416;VQSLOD=2.1961;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:25:53.45:0,53,741	0/0:11,0:11:30.07:0,30,435	0/0:16,0:15:15.89:0,16,182	0/0:12,0:10:23.75:0,24,300	0/0:31,0:31:81.26:0,81,1211	0/0:14,0:15:42.11:0,42,587	0/0:25,0:25:56.84:0,57,800	0/0:34,0:35:78.26:0,78,1198	0/0:17,0:17:48.15:0,48,715	1/1:6,22:28:63.10:660,63,0	1/1:4,14:19:23.99:310,24,0	0/0:25,0:26:63.21:0,63,959	0/0:13,0:14:41.63:0,42,609	0/0:13,0:14:35.59:0,36,495	0/0:17,0:17:45.14:0,45,658	0/0:21,0:21:57.19:0,57,857	0/0:24,0:25:63.21:0,63,942	0/0:22,0:22:57.19:0,57,860	0/0:26,0:27:59.45:0,59,883	0/0:14,0:14:39.12:0,39,579	0/0:16,0:17:41.60:0,42,566	0/0:13,0:14:30.10:0,30,444	0/0:11,0:11:24.08:0,24,369	0/0:14,0:14:30.10:0,30,460	0/0:27,0:27:57.18:0,57,857	0/0:26,1:28:28.25:0,28,809	0/0:22,0:24:56.66:0,57,793	0/0:13,0:13:29.59:0,30,424
chr10	65251477	.	C	CT	706.81	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-4.224;DP=614;FS=1.402;HRun=10;HaplotypeScore=69.9648;InbreedingCoeff=0.8815;MQ=67.97;MQ0=0;MQRankSum=-0.190;QD=18.60;ReadPosRankSum=-2.719;VQSLOD=3.4423;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:40:99:0,106,860	0/0:6,0:9:18.06:0,18,113	0/0:11,0:10:3.57:0,4,73	0/0:14,0:13:16.04:0,16,136	0/0:11,0:14:34.01:0,34,253	0/0:16,0:16:41.93:0,42,345	0/0:21,0:22:52.96:0,53,425	0/0:41,0:43:87.82:0,88,685	0/0:25,0:25:59.90:0,60,489	1/1:6,17:23:36.65:506,37,0	1/1:3,12:15:12.29:317,12,0	0/0:30,0:31:67.84:0,68,537	0/0:14,0:15:37.93:0,38,292	0/0:18,2:21:15.81:0,16,317	0/0:24,0:26:52.92:0,53,418	0/0:21,0:21:53.90:0,54,437	0/0:26,0:28:69.93:0,70,546	0/0:22,0:23:61.94:0,62,493	0/0:22,0:24:22.43:0,22,325	0/0:18,0:18:22.94:0,23,344	0/0:37,0:39:99:0,101,798	0/0:15,0:16:43.93:0,44,341	0/0:12,0:12:29.95:0,30,243	0/0:28,0:28:74.85:0,75,609	0/0:17,0:17:17.34:0,17,266	0/0:24,0:24:37.10:0,37,464	0/0:31,0:31:74.84:0,75,604	0/0:5,0:6:17.02:0,17,129
chr10	65251656	.	AC	A	568.14	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.062;DP=533;FS=1.598;HRun=8;HaplotypeScore=55.5682;InbreedingCoeff=0.9888;MQ=74.71;MQ0=0;MQRankSum=-1.646;QD=21.04;ReadPosRankSum=0.832;VQSLOD=3.8162;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:81.21:0,81,950	0/0:10,0:10:24.07:0,24,289	0/0:18,0:18:27:0,27,282	0/0:22,0:18:17.60:0,18,306	0/0:18,0:18:42.13:0,42,504	0/0:18,0:18:51.13:0,51,593	0/0:21,0:21:54.15:0,54,638	0/0:26,0:26:39.05:0,39,424	0/0:11,0:11:30.01:0,30,320	1/1:2,15:17:48.06:458,48,0	1/1:2,8:10:24.04:232,24,0	0/0:21,0:21:54.17:0,54,651	0/0:20,0:20:48.14:0,48,569	0/0:26,0:26:69.21:0,69,833	0/0:24,0:24:69.19:0,69,810	0/0:18,0:18:45.12:0,45,521	0/0:23,0:23:60.18:0,60,723	0/0:29,0:29:84.24:0,84,1001	0/0:14,0:14:30.09:0,30,361	0/0:9,0:9:27.06:0,27,313	0/0:35,0:35:90.26:0,90,1074	0/0:14,0:14:39.12:0,39,471	0/0:8,0:8:21.05:0,21,242	0/0:16,0:16:30.09:0,30,362	0/0:18,0:18:47.95:0,48,535	0/0:21,1:22:28.20:0,28,622	0/0:17,0:17:51.16:0,51,616	0/0:11,0:11:33.06:0,33,382
chr10	65252115	.	CTTTT	C	2076.21	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=9.828;DP=702;FS=2.117;HRun=4;HaplotypeScore=113.7997;InbreedingCoeff=0.8467;MQ=73.92;MQ0=0;MQRankSum=-3.721;QD=39.17;ReadPosRankSum=0.474;VQSLOD=0.9219;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,111,3192	0/0:7,0:7:21.07:0,21,602	0/0:9,0:9:18.48:0,18,331	0/1:15,0:15:1.89:2,0,294	0/0:14,0:14:42.12:0,42,1094	0/0:27,0:27:81.26:0,81,2275	0/0:23,0:23:69.23:0,69,1939	0/0:34,0:34:96.33:0,96,2784	0/0:16,0:16:48.16:0,48,1391	1/1:0,30:30:84.29:1757,84,0	1/1:0,8:8:21.07:439,21,0	0/0:37,0:37:99:0,111,3146	0/0:30,0:30:90.31:0,90,2595	0/0:31,0:31:93.32:0,93,2684	0/0:32,0:32:96.32:0,96,2673	0/0:36,0:36:99:0,108,3043	0/0:29,0:29:87.28:0,87,2442	0/0:26,0:26:78.27:0,78,2260	0/0:19,0:19:57.18:0,57,1536	0/0:25,0:25:75.26:0,75,2173	0/0:52,0:52:99:0,157,4328	0/0:29,0:29:87.30:0,87,2478	0/0:28,0:28:84.29:0,84,2404	0/0:27,0:27:81.28:0,81,2337	0/0:26,0:26:78.27:0,78,2220	0/0:26,0:26:78.27:0,78,2254	0/0:23,0:23:69.21:0,69,1817	0/0:6,0:6:18.06:0,18,521
chr10	65252245	.	AATTT	A	540.38	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.341;DP=551;FS=9.914;HRun=0;HaplotypeScore=92.5772;InbreedingCoeff=0.9912;MQ=93.37;MQ0=0;MQRankSum=-4.842;QD=24.56;ReadPosRankSum=-0.437;VQSLOD=2.6474;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:81.28:0,81,2108	0/0:8,0:8:24.08:0,24,604	0/0:21,0:21:51.16:0,51,1191	0/0:28,0:28:69.24:0,69,1633	0/0:14,0:14:33.11:0,33,869	0/0:16,0:16:45.15:0,45,1169	0/0:20,0:20:60.21:0,60,1525	0/0:34,0:34:84.29:0,84,2190	0/0:21,0:21:60.21:0,60,1570	1/1:3,10:12:24.08:434,24,0	1/1:1,8:8:17.93:225,18,0	0/0:24,0:24:66.23:0,66,1720	0/0:20,0:20:60.21:0,60,1571	0/0:20,0:20:57.20:0,57,1484	0/0:29,0:29:78.25:0,78,1979	0/0:20,0:20:60.21:0,60,1579	0/0:26,0:26:69.24:0,69,1785	0/0:21,0:21:63.22:0,63,1663	0/0:12,0:12:33.11:0,33,868	0/0:18,0:18:45.14:0,45,1113	0/0:32,0:32:96.33:0,96,2527	0/0:20,0:20:54.19:0,54,1405	0/0:13,0:13:24.08:0,24,634	0/0:21,0:21:60.16:0,60,1488	0/0:20,0:20:48.16:0,48,1252	0/0:16,0:16:45.15:0,45,1181	0/0:15,0:15:42.14:0,42,1073	0/0:11,0:11:24.08:0,24,634
chr10	65252442	.	AACAC	A	2851.63	PASS	AB=1.000;AC=41;AF=0.788;AN=52;BaseQRankSum=2.570;DP=679;FS=5.597;HRun=0;HaplotypeScore=129.4447;InbreedingCoeff=0.5831;MQ=60.91;MQ0=31;MQRankSum=-1.628;QD=6.07;ReadPosRankSum=1.268;VQSLOD=2.4163;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:23,8:30:8.97:90,9,0	1/1:7,1:9:5.01:46,5,0	./.	./.	0/0:16,0:16:9.03:0,9,164	1/1:18,0:18:6.18:288,6,0	1/1:27,0:27:14.01:228,14,0	0/0:21,0:21:2:0,2,15	0/0:17,0:17:11.98:0,12,149	1/1:21,0:21:14.18:104,14,0	1/1:7,0:9:9.01:83,9,0	1/1:25,6:29:27.08:393,27,0	0/0:25,0:25:11.69:0,12,459	1/1:12,7:18:9.03:139,9,0	1/1:16,0:14:6.02:82,6,0	1/1:13,0:23:7.05:62,7,0	1/1:34,0:33:11.60:218,12,0	1/1:26,3:29:22.96:357,23,0	1/1:17,2:18:5.98:66,6,0	1/1:7,6:13:11.40:140,11,0	1/1:31,1:37:3.48:47,3,0	1/1:20,7:28:14.46:182,14,0	0/0:11,0:11:15.05:0,15,314	0/1:44,0:43:10.01:10,0,601	1/1:12,1:14:5.51:52,6,0	1/1:15,2:18:20.99:233,21,0	1/1:13,0:13:3:28,3,0	1/1:9,0:7:14.30:160,14,0
chr10	65252550	.	ACACCACG	A	1417.81	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=9.615;DP=903;FS=10.239;HRun=0;HaplotypeScore=215.7281;InbreedingCoeff=0.8520;MQ=56.82;MQ0=15;MQRankSum=-3.819;QD=44.31;ReadPosRankSum=-0.996;VQSLOD=2.3178;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,102,2903	0/0:6,0:6:18.06:0,18,654	0/0:52,0:16:18.21:0,18,465	0/0:38,0:10:26.77:0,27,438	0/0:19,0:19:54.19:0,54,1936	0/0:25,0:25:67.44:0,67,2114	0/0:44,0:44:99:0,114,3207	0/0:43,0:41:98.05:0,98,2033	0/0:26,0:26:78.25:0,78,2872	1/1:3,29:31:75.08:1512,75,0	0/0:0,14:14:1.83:0,2,5	0/0:39,0:39:98.35:0,98,3682	0/0:24,0:24:66.70:0,67,2477	0/0:26,0:26:75.22:0,75,2474	0/0:20,0:20:42.14:0,42,1632	0/0:30,0:30:84.24:0,84,2946	0/0:36,0:35:81.17:0,81,2762	0/0:33,0:33:41.74:0,42,2199	0/0:24,0:24:53.91:0,54,1335	0/0:22,0:22:56.11:0,56,1679	0/0:121,0:116:99:0,248,8584	0/0:24,0:24:45.18:0,45,2146	0/0:26,0:26:47.11:0,47,1959	0/0:52,0:52:99:0,137,4652	0/0:20,0:20:48.16:0,48,1732	0/0:41,2:43:16.80:0,17,3000	0/0:13,0:13:36.02:0,36,1158	0/0:12,0:12:33.11:0,33,1280
chr10	65253194	.	CCA	C	1664.77	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.043;DP=728;FS=0.000;HRun=0;HaplotypeScore=88.3849;InbreedingCoeff=0.9999;MQ=81.72;MQ0=0;MQRankSum=-1.044;QD=39.64;ReadPosRankSum=-0.163;VQSLOD=4.8992;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,111,2135	0/0:15,0:15:42.14:0,42,765	0/0:18,0:18:54.14:0,54,984	0/0:22,0:22:46.46:0,46,941	0/0:21,0:21:54.17:0,54,997	0/0:20,0:20:57.20:0,57,1101	0/0:34,0:34:99:0,102,1969	0/0:23,0:23:66.22:0,66,1229	0/0:22,0:22:63.22:0,63,1213	1/1:1,24:25:69.23:1052,69,0	1/1:0,17:17:48.16:734,48,0	0/0:29,0:29:87.28:0,87,1626	0/0:37,0:37:99:0,111,2124	0/0:32,0:32:96.33:0,96,1834	0/0:33,0:33:96.33:0,96,1854	0/0:20,0:20:60.19:0,60,1103	0/0:40,0:40:99:0,120,2317	0/0:27,0:27:81.23:0,81,1525	0/0:15,0:15:42.14:0,42,804	0/0:22,0:22:60.18:0,60,1123	0/0:63,0:63:99:0,190,3585	0/0:24,0:24:69.24:0,69,1332	0/0:16,0:16:48.16:0,48,895	0/0:28,0:28:81.28:0,81,1537	0/0:22,0:22:66.23:0,66,1263	0/0:31,0:31:93.32:0,93,1788	0/0:19,0:19:54.16:0,54,994	0/0:15,0:15:36.12:0,36,695
chr10	65256642	.	TAC	T	1710.97	PASS	AB=0.897;AC=38;AF=0.731;AN=52;BaseQRankSum=2.833;DP=553;FS=12.841;HRun=0;HaplotypeScore=87.7820;InbreedingCoeff=0.2544;MQ=66.29;MQ0=12;MQRankSum=2.086;QD=3.94;ReadPosRankSum=3.189;VQSLOD=1.3346;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:44,0:42:20.87:164,21,0	1/1:4,0:4:2.96:20,3,0	./.	./.	0/1:13,0:13:5.94:6,0,19	1/1:12,0:11:11.93:88,12,0	1/1:20,0:21:21.25:143,21,0	1/1:21,0:21:5.06:37,5,0	0/1:7,0:7:16.03:29,0,16	0/0:24,0:24:34.55:0,35,208	0/0:12,0:12:2.99:0,3,24	1/1:23,0:23:29.83:221,30,0	0/0:9,0:15:3:0,3,26	1/1:12,8:20:6.02:65,6,0	1/1:20,0:20:5.94:40,6,0	1/1:13,16:29:15.32:131,15,0	1/1:16,0:16:20.83:148,21,0	0/1:10,6:15:13.27:36,0,13	1/1:16,0:20:9.63:54,10,0	1/1:6,0:6:2.98:21,3,0	1/1:36,0:35:29.76:211,30,0	0/1:10,11:21:9.99:27,0,10	0/0:11,2:14:5:0,5,26	0/1:31,0:31:15.22:15,0,218	1/1:12,4:18:11.86:111,12,0	0/1:25,0:25:1.11:116,0,1	1/1:17,0:16:8.92:61,9,0	1/1:12,1:12:17.77:119,18,0
chr10	65256686	.	CAGAGAGAGAGAGAGAGAGAG	C	297.73	PASS	AB=0.973;AC=3;AF=0.054;AN=56;BaseQRankSum=4.056;DP=668;FS=1.843;HRun=0;HaplotypeScore=287.6571;InbreedingCoeff=0.4140;MQ=52.40;MQ0=17;MQRankSum=-2.446;QD=5.13;ReadPosRankSum=0.950;VQSLOD=1.7951;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:36:72.72:0,73,5852	0/0:7,0:7:9.03:0,9,828	0/0:23,0:7:21.07:0,21,1505	0/0:25,0:9:27.09:0,27,2040	0/0:12,0:12:33.11:0,33,2532	0/0:19,0:18:39.12:0,39,2836	0/0:30,0:30:66.18:0,66,4520	0/0:30,0:29:75.64:0,76,4258	0/0:16,0:16:39.13:0,39,3006	1/1:17,0:20:3.72:321,4,0	0/0:4,4:10:2.94:0,3,18	0/0:33,0:33:71.69:0,72,4729	0/0:21,0:21:30.10:0,30,2289	0/0:28,0:28:42.14:0,42,3590	0/0:24,0:23:48.16:0,48,3832	0/0:30,0:30:44.95:0,45,3479	0/0:23,0:23:44.64:0,45,2771	0/0:19,0:18:34.67:0,35,2316	0/0:25,0:25:72.25:0,72,4496	0/0:16,0:16:36.08:0,36,2651	0/0:43,0:41:82.16:0,82,5882	0/0:35,0:34:48.16:0,48,3892	0/0:18,0:18:33.11:0,33,2465	0/0:29,0:30:66.23:0,66,5096	0/0:17,0:16:30.10:0,30,2617	0/1:35,1:35:69.01:69,0,6344	0/0:25,0:25:60.26:0,60,3787	0/0:10,0:9:24.08:0,24,888
chr10	65257167	.	CAGCTAGT	C	1304.65	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.944;DP=680;FS=6.416;HRun=0;HaplotypeScore=153.5815;InbreedingCoeff=0.9870;MQ=94.54;MQ0=0;MQRankSum=-7.188;QD=62.13;ReadPosRankSum=0.119;VQSLOD=3.6411;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,120,4803	0/0:9,0:9:27.09:0,27,1045	0/0:33,0:33:90.04:0,90,3176	0/0:29,0:29:81.28:0,81,3112	0/0:15,0:15:42.14:0,42,1651	0/0:23,0:23:66.23:0,66,2516	0/0:34,0:34:99:0,102,4102	0/0:28,0:28:81.28:0,81,3119	0/0:23,0:23:69.24:0,69,2692	1/1:1,14:15:39.13:1028,39,0	1/1:0,6:6:15.05:395,15,0	0/0:27,0:27:75.26:0,75,2765	0/0:37,0:37:99:0,102,4027	0/0:18,0:18:54.19:0,54,2133	0/0:34,0:34:99:0,102,4019	0/0:27,0:27:78.27:0,78,3085	0/0:23,0:23:69.22:0,69,2670	0/0:20,0:20:60.21:0,60,2424	0/0:16,0:16:48.11:0,48,1677	0/0:18,0:18:51.18:0,51,1988	0/0:59,0:59:99:0,172,6593	0/0:12,0:12:36.12:0,36,1404	0/0:19,0:19:45.15:0,45,1802	0/0:31,0:31:93.30:0,93,3652	0/0:26,0:26:75.26:0,75,2976	0/0:26,0:26:78.27:0,78,3013	0/0:22,0:20:66.21:0,66,2550	0/0:6,0:6:18.06:0,18,706
chr10	65259475	.	A	ACGTGTGTG	5455.49	PASS	AB=1.000;AC=38;AF=0.679;AN=56;BaseQRankSum=-0.811;DP=735;FS=16.328;HRun=0;HaplotypeScore=162.0698;InbreedingCoeff=0.6776;MQ=62.15;MQ0=19;MQRankSum=-1.186;QD=10.87;ReadPosRankSum=-4.347;VQSLOD=1.6427;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:3,0:41:2.80:13,3,0	1/1:0,0:6:3.01:76,3,0	0/0:34,0:17:50.90:0,51,494	0/0:38,0:18:50.25:0,50,446	0/0:14,0:13:15.32:0,15,147	1/1:15,0:15:21.24:160,21,0	1/1:42,0:42:71.22:545,71,0	1/1:24,0:22:33.13:306,33,0	0/0:15,0:15:7.58:0,8,258	0/1:27,0:27:99:462,0,299	0/0:12,0:11:8.79:0,9,74	1/1:3,0:32:3.60:188,4,0	0/0:33,0:33:86.93:0,87,982	1/1:30,0:30:47.20:406,47,0	0/0:4,19:33:0.01:0,0,0	1/1:3,15:26:2.79:84,3,0	1/1:35,0:34:20.59:608,21,0	1/1:7,0:32:1.75:120,2,0	1/1:3,11:16:39.68:450,40,0	1/1:10,0:9:14.65:186,15,0	1/1:17,0:58:23.98:277,24,0	1/1:15,0:15:29.71:272,30,0	0/1:17,0:17:2.15:2,0,103	0/0:50,0:52:26.38:0,26,1438	1/1:12,0:12:23.60:168,24,0	1/1:27,0:27:74.47:661,74,0	1/1:9,0:22:27.81:290,28,0	1/1:9,0:9:20.86:182,21,0
chr10	65259983	.	T	TGTC	1594.14	PASS	AC=16;AF=0.800;AN=20;BaseQRankSum=-0.445;DP=164;FS=0.000;HRun=0;HaplotypeScore=41.6108;InbreedingCoeff=0.5952;MQ=18.35;MQ0=108;MQRankSum=1.447;QD=38.88;ReadPosRankSum=2.282;VQSLOD=4.1548;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	1/1:0,5:5:15.05:341,15,0	./.	./.	0/0:14,0:12:6.02:0,6,112	./.	./.	./.	./.	1/1:0,0:1:3.01:56,3,0	1/1:0,7:7:15.05:341,15,0	./.	./.	./.	./.	./.	./.	./.	./.	1/1:1,5:7:15.05:341,15,0	./.	1/1:0,4:5:6.02:136,6,0	0/0:6,0:6:9.03:0,9,136	./.	1/1:1,8:8:9.02:206,9,0	1/1:0,3:3:9.03:202,9,0	./.	1/1:0,3:1:3.01:68,3,0
chr10	65260895	.	T	TGTC	9694.98	PASS	AC=42;AF=0.808;AN=52;BaseQRankSum=5.878;DP=398;FS=0.000;HRun=0;HaplotypeScore=75.8049;InbreedingCoeff=0.8980;MQ=27.19;MQ0=102;MQRankSum=0.604;QD=34.02;ReadPosRankSum=0.193;VQSLOD=4.8138;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,13:11:18.06:415,18,0	1/1:0,5:5:12.04:275,12,0	./.	./.	0/0:16,0:16:9.03:0,9,164	1/1:0,19:14:24.08:551,24,0	1/1:0,11:12:33.11:744,33,0	1/1:2,8:10:27.09:594,27,0	0/0:22,0:15:18.06:0,18,335	1/1:0,11:13:33.11:739,33,0	1/1:0,7:8:15.05:342,15,0	1/1:1,18:15:27.09:619,27,0	0/0:28,0:17:30.10:0,30,555	1/1:0,12:8:15.05:349,15,0	1/1:1,19:17:24.08:552,24,0	1/1:1,15:12:21.06:483,21,0	1/1:0,13:10:15.05:341,15,0	1/1:3,21:14:17.18:349,17,0	1/1:0,4:5:12.04:262,12,0	1/1:0,9:9:18.06:413,18,0	1/1:1,11:12:17.84:413,18,0	1/1:0,10:11:12.04:274,12,0	0/0:8,0:7:15.05:0,15,273	0/0:20,0:10:9.03:0,9,167	1/1:0,13:15:24.08:550,24,0	1/1:0,12:14:39.13:881,39,0	1/1:1,14:13:17.87:409,18,0	1/1:0,3:2:6.02:138,6,0
chr10	65261033	.	T	TG	15844.95	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=3.694;DP=668;FS=10.389;HRun=4;HaplotypeScore=108.2359;InbreedingCoeff=0.9928;MQ=74.49;MQ0=0;MQRankSum=-1.519;QD=32.54;ReadPosRankSum=3.066;VQSLOD=4.1924;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,41:46:93.31:1271,93,0	1/1:0,9:9:27.09:369,27,0	0/0:18,0:18:24.05:0,24,321	0/0:18,0:18:45:0,45,458	0/0:23,0:23:27.07:0,27,305	1/1:2,7:9:18.06:246,18,0	1/1:3,34:37:90.30:1230,90,0	1/1:3,20:24:63.15:811,63,0	0/0:25,0:25:60.16:0,60,676	0/0:25,0:25:65.86:0,66,748	0/0:10,0:10:18.05:0,18,201	1/1:4,25:29:59.87:818,60,0	0/0:24,0:24:63.18:0,63,714	1/1:3,22:25:66.22:898,66,0	1/1:2,30:32:75.25:1025,75,0	1/1:0,17:17:51.17:696,51,0	1/1:1,55:56:99:1989,147,0	1/1:0,23:24:63.07:833,63,0	1/1:0,18:18:51.17:697,51,0	1/1:6,11:14:24.08:328,24,0	1/1:6,42:48:99:1519,111,0	1/1:3,22:25:57.19:779,57,0	0/0:11,0:11:21.06:0,21,238	0/0:27,0:27:75.21:0,75,851	1/1:3,10:11:21.07:287,21,0	1/1:2,24:26:72.22:964,72,0	1/1:0,25:24:66.18:880,66,0	1/1:0,7:7:15.05:205,15,0
chr10	65261812	.	GT	G	10649.51	PASS	AB=0.967;AC=44;AF=0.786;AN=56;BaseQRankSum=8.941;DP=726;FS=9.019;HRun=11;HaplotypeScore=74.2327;InbreedingCoeff=0.8137;MQ=72.18;MQ0=0;MQRankSum=-0.739;QD=17.99;ReadPosRankSum=0.801;VQSLOD=5.6394;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,42:45:72.90:806,73,0	1/1:1,11:12:32.96:271,33,0	0/1:17,0:15:24.10:24,0,176	0/1:13,1:14:4.81:5,0,129	0/0:30,2:32:49.76:0,50,718	1/1:2,18:20:50.94:419,51,0	1/1:1,26:27:71.92:591,72,0	1/1:10,22:32:59.78:485,60,0	0/0:25,0:25:60.12:0,60,624	1/1:2,27:29:77.90:639,78,0	1/1:2,25:28:71.90:591,72,0	1/1:9,43:52:99:985,120,0	0/0:31,0:31:57.37:0,57,706	1/1:1,21:23:58.97:474,59,0	1/1:4,25:31:40.98:522,41,0	1/1:7,26:34:76.92:622,77,0	1/1:2,20:24:49.02:381,49,0	1/1:1,19:20:44.91:366,45,0	1/1:5,13:18:38.94:320,39,0	1/1:1,27:28:77.81:632,78,0	1/1:9,24:35:72.97:578,73,0	1/1:5,23:28:62.89:517,63,0	0/0:18,0:18:44.92:0,45,448	0/0:28,0:28:75.18:0,75,792	1/1:0,19:19:47.93:394,48,0	1/1:3,22:25:65.91:540,66,0	1/1:4,18:22:41:385,41,0	1/1:4,4:9:14.02:104,14,0
chr10	65262554	.	T	TGCCGG	18845.61	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=-3.495;DP=407;FS=16.277;HRun=0;HaplotypeScore=68.9785;InbreedingCoeff=0.9644;MQ=69.82;MQ0=0;MQRankSum=-10.581;QD=61.99;ReadPosRankSum=1.481;VQSLOD=4.5342;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,15:19:45.01:1105,45,0	1/1:0,3:4:6.02:186,6,0	0/0:12,0:12:36.10:0,36,699	0/0:9,0:10:27.03:0,27,425	0/0:16,0:16:45.14:0,45,905	1/1:2,10:14:24.08:579,24,0	1/1:2,19:25:39.13:1207,39,0	1/1:4,18:22:48.15:1381,48,0	0/0:14,0:14:36.12:0,36,764	1/1:2,13:16:45.14:1254,45,0	1/1:0,9:9:15.05:457,15,0	1/1:2,11:13:30.02:789,30,0	0/0:16,0:16:48.15:0,48,983	1/1:0,9:14:27.09:843,27,0	1/1:0,14:14:36.08:1052,36,0	1/1:2,13:16:39.13:1217,39,0	1/1:1,18:20:47.90:1477,48,0	1/1:1,17:19:39.13:1219,39,0	1/1:5,12:17:45.12:1154,45,0	1/1:0,9:11:27:690,27,0	1/1:2,26:29:35.77:1050,36,0	1/1:0,3:3:9.03:279,9,0	0/0:9,0:9:27.09:0,27,575	0/0:26,0:26:78.23:0,78,1550	1/1:3,11:14:36.12:890,36,0	1/1:0,10:10:30.10:929,30,0	1/1:1,6:7:21.03:583,21,0	1/1:2,5:8:18.06:506,18,0
chr10	65262686	.	G	GC	1682.09	PASS	AC=40;AF=0.952;AN=42;BaseQRankSum=-3.143;DP=97;FS=5.226;HRun=0;HaplotypeScore=27.4179;InbreedingCoeff=0.1885;MQ=91.05;MQ0=0;MQRankSum=-3.115;QD=20.77;ReadPosRankSum=-0.944;VQSLOD=4.1506;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	1/1:1,4:5:0.59:62,1,0	0/0:7,0:8:8.13:0,8,102	1/1:0,0:1:3.01:42,3,0	1/1:1,5:6:14.98:194,15,0	1/1:0,6:6:17.92:216,18,0	1/1:1,8:9:26.87:225,27,0	1/1:0,3:3:5.95:63,6,0	1/1:0,10:9:21.04:279,21,0	1/1:0,6:6:11.72:69,12,0	1/1:0,5:5:2.94:18,3,0	1/1:0,5:5:11.95:153,12,0	1/1:3,0:3:8.88:61,9,0	1/1:0,2:2:6.02:90,6,0	1/1:0,4:4:2.84:17,3,0	./.	./.	1/1:1,0:1:2.97:20,3,0	1/1:0,4:4:5.88:36,6,0	./.	1/1:1,1:2:5.88:36,6,0	./.	1/1:0,1:1:3.01:45,3,0	1/1:0,1:1:2.94:18,3,0	1/1:0,3:3:8.95:88,9,0	1/1:0,4:4:3.01:45,3,0	./.
chr10	65263024	.	CT	C	5842.79	PASS	AB=0.950;AC=53;AF=0.946;AN=56;BaseQRankSum=0.748;DP=681;FS=2.814;HRun=1;HaplotypeScore=283.4952;InbreedingCoeff=-0.0742;MQ=64.74;MQ0=1;MQRankSum=-5.398;QD=8.58;ReadPosRankSum=7.268;VQSLOD=2.3381;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:26:29.51:220,30,0	1/1:5,0:5:11.43:61,11,0	0/1:25,3:25:33.88:34,0,143	0/1:32,2:34:99:103,0,116	1/1:13,0:13:8.35:39,8,0	1/1:25,0:25:34.48:188,34,0	1/1:33,0:32:43.55:305,44,0	0/1:29,0:28:11.52:138,0,12	1/1:32,0:32:40.76:431,41,0	1/1:28,0:28:65.17:444,65,0	1/1:12,0:12:11.50:65,12,0	1/1:34,0:33:45.79:322,46,0	1/1:35,0:35:3.77:387,4,0	1/1:36,0:36:54.63:383,55,0	1/1:38,0:37:23.17:386,23,0	1/1:45,0:44:76.19:587,76,0	1/1:34,0:32:9.80:202,10,0	1/1:12,0:12:29.81:159,30,0	1/1:16,0:16:28.77:161,29,0	1/1:21,0:21:17.03:94,17,0	1/1:16,0:15:2.66:11,3,0	1/1:15,0:15:9.21:103,9,0	1/1:12,0:12:4.94:21,5,0	1/1:33,0:29:6.07:134,6,0	1/1:14,0:14:15.31:134,15,0	1/1:26,0:26:70.70:371,71,0	1/1:19,0:18:51.95:286,52,0	1/1:7,0:7:2.98:72,3,0
chr10	65263029	.	CA	C	5693.78	PASS	AB=0.996;AC=44;AF=0.786;AN=56;BaseQRankSum=5.567;DP=663;FS=0.459;HRun=1;HaplotypeScore=269.0140;InbreedingCoeff=-0.1977;MQ=69.69;MQ0=0;MQRankSum=-6.817;QD=8.59;ReadPosRankSum=11.513;VQSLOD=0.7262;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:31,0:29:54.19:176,0,54	1/1:5,0:5:11.56:66,12,0	0/1:26,0:25:12.58:13,0,145	0/1:32,0:31:72.68:73,0,265	1/1:13,0:13:8.40:41,8,0	0/1:26,0:26:63.31:138,0,63	0/1:32,0:31:3.12:252,0,3	1/1:25,0:24:1.36:153,1,0	1/1:30,0:30:84.03:490,84,0	1/1:29,0:29:31.60:334,32,0	1/1:12,0:12:11.52:66,12,0	1/1:33,0:33:40.67:331,41,0	1/1:29,2:31:45.67:467,46,0	1/1:33,1:34:52.43:407,52,0	1/1:35,0:35:39.23:397,39,0	1/1:42,0:41:92.62:608,93,0	0/1:34,0:32:74.33:182,0,74	1/1:12,0:12:28.43:146,28,0	0/1:18,0:18:24.59:148,0,25	0/1:20,1:21:43.73:69,0,44	0/1:17,0:16:3.65:4,0,28	0/1:17,0:17:29.35:97,0,29	0/1:11,0:11:10.02:14,0,10	0/1:32,0:28:0.90:125,0,1	1/1:12,0:12:26.27:164,26,0	1/1:26,0:26:45.74:348,46,0	1/1:21,0:20:19.32:294,19,0	1/1:6,0:6:17.28:93,17,0
chr10	65264325	.	T	TGC	779.93	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=-5.106;DP=482;FS=9.251;HRun=0;HaplotypeScore=120.3589;InbreedingCoeff=0.8096;MQ=76.26;MQ0=14;MQRankSum=2.381;QD=20.00;ReadPosRankSum=-1.002;VQSLOD=3.6526;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:30:72.85:0,73,412	0/0:13,0:13:18.21:0,18,123	0/0:25,0:18:36.16:0,36,642	0/0:34,0:20:44.17:0,44,592	0/0:17,0:16:42.13:0,42,583	0/0:14,0:14:36.53:0,37,196	0/0:16,0:16:28.17:0,28,182	0/0:27,0:27:63.31:0,63,385	0/0:9,0:9:24.08:0,24,337	1/1:5,9:14:33.08:411,33,0	1/1:13,0:13:32.95:488,33,0	0/0:22,0:22:54.89:0,55,290	0/0:13,0:13:39.13:0,39,553	0/0:15,0:14:28.81:0,29,258	0/0:14,0:14:31.18:0,31,222	0/0:23,0:23:52.45:0,52,281	0/0:21,0:20:53.65:0,54,353	0/0:15,0:15:37.40:0,37,266	0/0:19,0:17:38.29:0,38,237	0/0:9,0:9:16.78:0,17,90	0/0:17,0:17:35.91:0,36,176	0/0:17,0:17:33.69:0,34,185	0/0:11,0:11:30.10:0,30,421	0/0:21,0:21:57.18:0,57,813	0/0:14,0:14:24.42:0,24,117	0/1:11,0:11:5.72:6,0,68	0/0:10,0:9:25.71:0,26,155	0/0:16,0:16:36.91:0,37,216
chr10	65264329	.	T	TGC	9876.94	PASS	AB=1.000;AC=37;AF=0.661;AN=56;BaseQRankSum=0.992;DP=564;FS=4.808;HRun=0;HaplotypeScore=99.5306;InbreedingCoeff=0.9399;MQ=67.90;MQ0=31;MQRankSum=-3.674;QD=26.20;ReadPosRankSum=4.484;VQSLOD=6.0139;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:33,0:32:75.21:1133,75,0	1/1:11,0:11:26.30:371,26,0	0/0:23,0:16:33.11:0,33,607	0/0:33,0:19:33.59:0,34,582	0/0:26,0:23:36.12:0,36,544	1/1:18,0:17:32.85:518,33,0	1/1:14,0:14:21.80:282,22,0	1/1:22,17:38:30.38:763,30,0	0/0:14,0:13:27.53:0,28,374	0/0:16,0:15:25.27:0,25,107	0/0:17,0:17:12.45:0,12,48	1/1:24,0:24:47.64:699,48,0	0/0:22,0:22:38.46:0,38,574	0/1:20,0:18:0.22:256,0,0	1/1:21,0:21:32:423,32,0	1/1:28,0:28:54.64:833,55,0	1/1:25,0:23:47.77:697,48,0	1/1:14,0:14:16.95:347,17,0	1/1:21,0:19:13.21:442,13,0	1/1:8,0:8:15.05:238,15,0	1/1:26,0:22:38.97:616,39,0	1/1:17,0:17:33.11:510,33,0	0/0:11,0:11:27.09:0,27,405	0/0:25,0:23:57.19:0,57,863	1/1:15,0:15:24.08:394,24,0	1/1:10,0:10:12.10:437,12,0	1/1:15,0:13:24.21:349,24,0	1/1:17,0:15:36.43:570,36,0
chr10	65264465	.	TTC	T	16466.82	PASS	AB=0.514;AC=36;AF=0.643;AN=56;BaseQRankSum=12.981;DP=628;FS=2.634;HRun=0;HaplotypeScore=117.8709;InbreedingCoeff=0.8605;MQ=91.54;MQ0=0;MQRankSum=-5.062;QD=41.17;ReadPosRankSum=3.827;VQSLOD=6.3615;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,31:31:69.24:1119,69,0	1/1:0,9:9:27.09:440,27,0	0/0:29,0:29:87.27:0,87,1676	0/0:30,0:30:83.36:0,83,1569	0/0:26,0:26:78.27:0,78,1567	1/1:0,22:22:54.18:880,54,0	1/1:0,28:28:63.22:1027,63,0	1/1:0,19:19:57.19:918,57,0	0/0:19,0:19:57.18:0,57,1107	0/0:32,0:32:96.33:0,96,1927	0/0:20,0:20:57.20:0,57,1158	1/1:0,25:25:66.23:1075,66,0	0/0:21,0:21:60.21:0,60,1208	1/1:0,23:23:63.22:1027,63,0	1/1:0,30:30:84.29:1370,84,0	0/1:1,18:19:7:778,0,7	1/1:0,17:17:41.95:685,42,0	1/1:0,19:19:45.15:734,45,0	1/1:0,19:19:54.14:789,54,0	1/1:0,14:14:33.11:536,33,0	1/1:0,26:26:54.09:881,54,0	1/1:0,19:19:51.17:832,51,0	0/0:17,0:17:51.18:0,51,1025	0/0:34,0:34:99:0,102,2051	1/1:0,16:16:39.13:635,39,0	0/1:1,17:18:12.70:686,0,13	1/1:0,32:32:84.29:1369,84,0	1/1:0,14:14:42.14:685,42,0
chr10	65264878	.	T	TAC	2384.56	PASS	AB=0.811;AC=32;AF=0.640;AN=50;BaseQRankSum=-2.571;DP=695;FS=0.663;HRun=0;HaplotypeScore=105.4590;InbreedingCoeff=0.1651;MQ=60.92;MQ0=8;MQRankSum=-0.120;QD=4.86;ReadPosRankSum=-0.702;VQSLOD=2.7006;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:33:48.83:49,0,52	0/1:3,4:7:26.40:38,0,26	./.	./.	0/0:18,0:21:20.65:0,21,169	0/1:15,7:22:23.39:80,0,23	0/1:15,13:28:28.74:284,0,29	1/1:24,0:24:13.20:132,13,0	0/1:19,1:21:32.39:32,0,85	0/0:31,0:34:11.07:0,11,57	./.	0/1:19,7:26:17.34:163,0,17	0/0:31,0:31:18.04:0,18,194	1/1:16,4:21:18.92:379,19,0	1/1:17,16:37:18.02:209,18,0	1/1:16,10:29:14.97:204,15,0	1/1:23,0:40:3.32:163,3,0	1/1:14,8:22:18.06:256,18,0	1/1:13,2:15:6.47:69,6,0	0/1:11,0:11:26.39:36,0,26	1/1:33,0:57:2.57:21,3,0	1/1:20,1:21:3.01:44,3,0	0/0:12,0:12:9.02:0,9,98	0/0:49,0:59:64.25:0,64,520	0/1:11,6:17:35.41:35,0,48	1/1:26,0:26:26.96:242,27,0	1/1:20,0:20:8.86:92,9,0	1/1:4,0:7:3:26,3,0
chr10	65264973	.	G	GTCA	1625.05	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-5.958;DP=828;FS=13.882;HRun=0;HaplotypeScore=122.3312;InbreedingCoeff=0.9905;MQ=72.72;MQ0=0;MQRankSum=-0.553;QD=39.64;ReadPosRankSum=-0.753;VQSLOD=3.6985;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:63,0:63:99:0,165,2228	0/0:9,0:9:27.09:0,27,385	0/0:35,0:34:57.47:0,57,739	0/0:34,0:34:62.70:0,63,854	0/0:30,0:30:69.22:0,69,972	0/0:21,0:21:54.16:0,54,756	0/0:37,0:38:87.22:0,87,1207	0/0:38,0:38:78.17:0,78,1026	0/0:23,0:23:60.13:0,60,816	1/1:5,26:31:72.20:1378,72,0	1/1:2,8:10:18.06:367,18,0	0/0:51,0:51:99:0,144,1998	0/0:34,0:34:78.18:0,78,1041	0/0:23,0:24:69.12:0,69,911	0/0:34,0:34:84.09:0,84,1164	0/0:22,0:21:57.17:0,57,797	0/0:34,0:34:93.21:0,93,1291	0/0:27,0:27:66.20:0,66,924	0/0:16,0:16:27.08:0,27,371	0/0:17,0:17:39.13:0,39,561	0/0:69,0:70:99:0,171,2369	0/0:22,0:22:60.17:0,60,815	0/0:14,0:14:39.09:0,39,535	0/0:61,0:61:99:0,169,2416	0/0:25,0:25:60.10:0,60,781	0/0:26,0:26:72.12:0,72,907	0/0:13,0:12:36.11:0,36,497	0/0:6,0:6:18.04:0,18,239
chr10	65265410	.	G	GC	22510.95	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=0.725;DP=733;FS=5.863;HRun=0;HaplotypeScore=89.1394;InbreedingCoeff=0.9998;MQ=71.79;MQ0=8;MQRankSum=-5.811;QD=41.61;ReadPosRankSum=3.490;VQSLOD=5.4201;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,37:37:96.33:1520,96,0	1/1:0,14:14:35.92:575,36,0	0/0:29,0:29:87.06:0,87,1132	0/0:28,0:26:52.83:0,53,884	0/0:38,0:38:99:0,108,1508	1/1:0,19:18:51.17:814,51,0	1/1:1,30:29:81.28:1294,81,0	1/1:1,20:16:45.14:698,45,0	0/0:22,0:22:66.21:0,66,906	1/1:0,26:24:69.24:1103,69,0	1/1:0,13:12:27.09:431,27,0	1/1:0,30:30:84.29:1340,84,0	0/0:24,0:24:72.23:0,72,992	1/1:0,29:28:78.14:1240,78,0	1/1:0,34:34:99:1581,99,0	1/1:0,22:20:54.18:863,54,0	1/1:0,27:27:81.28:1280,81,0	1/1:1,21:20:57.19:910,57,0	1/1:0,16:16:42.14:665,42,0	1/1:2,23:25:69.22:1076,69,0	1/1:1,37:38:93.32:1486,93,0	1/1:1,29:29:75.25:1181,75,0	0/0:23,0:23:66.22:0,66,916	0/0:28,0:28:81.25:0,81,1113	1/1:0,19:19:51.17:814,51,0	1/1:1,37:34:99:1583,99,0	1/1:0,34:34:93.32:1483,93,0	1/1:0,14:14:36.12:573,36,0
chr10	65265903	.	TGGCACTTCCACTCAGACCCTGCTTCC	T	25364.77	PASS	AB=0.524;AC=37;AF=0.661;AN=56;BaseQRankSum=15.258;DP=483;FS=0.000;HRun=0;HaplotypeScore=283.0068;InbreedingCoeff=0.8788;MQ=78.33;MQ0=0;MQRankSum=-14.364;QD=87.46;ReadPosRankSum=3.710;VQSLOD=3.3420;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,23:23:35.99:2169,36,0	1/1:0,8:7:15.05:1066,15,0	0/0:21,0:21:60.20:0,60,3860	0/0:20,0:20:57.16:0,57,3562	0/0:16,0:16:45.10:0,45,4228	1/1:0,8:8:12.04:853,12,0	1/1:1,17:18:9.03:640,9,0	1/1:18,0:18:47.81:411,48,0	0/0:28,0:28:84.22:0,84,8543	0/0:23,0:23:69.22:0,69,6787	0/0:14,0:14:42.01:0,42,2807	1/1:0,21:21:42.62:2988,43,0	0/0:23,0:23:66.20:0,66,6583	1/1:1,13:14:27.09:1913,27,0	1/1:1,11:12:24.08:1707,24,0	1/1:0,11:11:15.05:1067,15,0	1/1:2,19:21:17.99:854,18,0	1/1:2,21:23:24.08:1649,24,0	1/1:0,18:18:53.65:1424,54,0	1/1:0,13:13:15.05:1067,15,0	1/1:1,17:18:9.03:465,9,0	1/1:0,17:15:27.09:1919,27,0	0/0:20,0:20:60.02:0,60,5652	0/0:28,0:28:81.25:0,81,8593	1/1:0,17:17:33.11:2344,33,0	0/1:1,10:11:99:1122,0,340	1/1:0,8:8:15.05:1067,15,0	1/1:0,11:11:9.03:640,9,0
chr10	65266892	.	G	GTC	24535.98	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=-16.342;DP=705;FS=1.442;HRun=0;HaplotypeScore=68.6380;InbreedingCoeff=0.9997;MQ=76.17;MQ0=0;MQRankSum=-1.970;QD=46.91;ReadPosRankSum=0.359;VQSLOD=5.8283;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,28:30:78.27:1404,78,0	1/1:1,12:13:36.12:648,36,0	0/0:15,0:15:27.06:0,27,340	0/0:14,0:14:32.94:0,33,439	0/0:47,0:47:99:0,135,1853	1/1:1,16:17:45.15:810,45,0	1/1:3,21:24:54.19:972,54,0	1/1:0,27:26:78.27:1387,78,0	0/0:23,0:23:69.23:0,69,966	1/1:2,27:29:84.29:1508,84,0	1/1:1,27:28:78.27:1404,78,0	1/1:2,20:23:60.21:1080,60,0	0/0:23,0:23:66.19:0,66,888	1/1:0,15:15:45.15:810,45,0	1/1:3,21:26:54.19:973,54,0	1/1:1,21:23:41.31:1110,41,0	1/1:0,29:29:78.27:1404,78,0	1/1:1,28:30:75.21:1295,75,0	1/1:2,15:17:45.15:810,45,0	1/1:1,31:32:72.25:1296,72,0	1/1:0,20:20:54.19:972,54,0	1/1:2,26:28:72.25:1296,72,0	0/0:35,0:35:99:0,99,1381	0/0:25,0:25:72.24:0,72,1008	1/1:1,22:23:57.20:1026,57,0	1/1:2,36:39:99:1960,111,0	1/1:3,24:27:69.24:1234,69,0	1/1:1,22:23:63.22:1134,63,0
chr10	65267342	.	T	TTCC	24624.23	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-14.370;DP=743;FS=22.666;HRun=0;HaplotypeScore=96.2042;InbreedingCoeff=0.9974;MQ=86.10;MQ0=0;MQRankSum=-3.722;QD=48.76;ReadPosRankSum=2.878;VQSLOD=4.8547;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,38:42:99:2181,102,0	1/1:1,11:13:33.03:706,33,0	0/0:24,0:24:47.30:0,47,728	0/0:31,0:30:51.56:0,52,1007	0/0:17,0:17:51.17:0,51,821	1/1:1,21:22:54.14:1158,54,0	1/1:3,25:28:69.24:1538,69,0	1/1:9,36:47:99:2340,111,0	0/0:32,0:32:83.72:0,84,1304	0/0:26,0:26:69.16:0,69,1125	0/0:16,0:16:42.13:0,42,651	1/1:2,22:26:59.83:1330,60,0	0/0:35,0:35:96.29:0,96,1540	1/1:5,20:25:51.17:1110,51,0	1/1:5,26:32:72.25:1595,72,0	1/1:3,20:23:54.19:1198,54,0	1/1:5,29:35:75.26:1640,75,0	1/1:8,28:37:81.28:1807,81,0	1/1:5,14:19:51.17:1012,51,0	1/1:2,11:13:36.08:726,36,0	1/1:5,42:49:93.79:1992,94,0	1/1:6,15:22:42.14:929,42,0	0/0:20,0:20:54.05:0,54,875	0/0:37,0:37:96.31:0,96,1528	1/1:4,18:23:42.14:908,42,0	1/1:6,17:23:51.18:1115,51,0	1/1:2,16:20:45.11:1004,45,0	1/1:0,6:6:15.05:335,15,0
chr10	65267772	.	G	GAAAA	8971.23	PASS	AB=1.000;AC=40;AF=0.714;AN=56;BaseQRankSum=-5.080;DP=563;FS=9.185;HRun=11;HaplotypeScore=99.1282;InbreedingCoeff=0.8383;MQ=76.85;MQ0=3;MQRankSum=-4.581;QD=21.62;ReadPosRankSum=-3.836;VQSLOD=1.9810;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:13,19:37:33.11:595,33,0	1/1:3,9:14:19.26:340,19,0	0/0:34,0:25:30.23:0,30,304	0/1:23,0:19:0.55:1,0,76	0/0:24,0:27:52.19:0,52,680	1/1:1,19:24:43.20:994,43,0	1/1:5,4:18:22.05:389,22,0	1/1:11,18:33:50.96:721,51,0	0/1:20,0:20:18.10:18,0,394	0/0:1,0:20:37.59:0,38,349	0/0:1,0:15:41.64:0,42,314	1/1:6,16:22:33.08:714,33,0	0/0:22,0:22:53.07:0,53,711	1/1:2,2:4:9.03:175,9,0	1/1:4,15:22:21.07:421,21,0	1/1:6,17:25:24.03:488,24,0	1/1:20,2:23:36.09:556,36,0	1/1:2,11:15:18.02:334,18,0	1/1:5,14:20:44.94:744,45,0	1/1:6,10:16:17.97:230,18,0	1/1:2,7:12:6.49:109,6,0	1/1:2,10:15:30.02:514,30,0	0/0:15,0:15:26.90:0,27,365	0/0:14,0:14:36.02:0,36,455	1/1:4,13:20:21.07:411,21,0	1/1:10,5:15:38.50:537,39,0	1/1:5,15:21:18.95:360,19,0	1/1:1,13:15:20.98:320,21,0
chr10	65269353	.	A	AAGT	29037.27	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-5.246;DP=793;FS=3.448;HRun=0;HaplotypeScore=115.8141;InbreedingCoeff=0.9946;MQ=82.42;MQ0=0;MQRankSum=-5.688;QD=52.13;ReadPosRankSum=1.932;VQSLOD=7.2924;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,44:54:99:2474,117,0	1/1:1,4:5:12.04:262,12,0	0/0:15,0:15:40.69:0,41,615	0/0:34,0:34:79.41:0,79,1171	0/0:25,0:25:69.21:0,69,1044	1/1:0,21:22:60.21:1289,60,0	1/1:2,21:23:51.17:1113,51,0	1/1:9,33:42:99:2230,105,0	0/0:29,0:29:78.26:0,78,1213	0/0:41,0:41:99:0,117,1765	0/0:16,0:16:45.14:0,45,688	1/1:3,36:39:99:2188,102,0	0/0:31,0:31:78.23:0,78,1187	1/1:2,32:35:93.32:2025,93,0	1/1:3,41:45:99:2642,123,0	1/1:6,22:29:21.66:1358,22,0	1/1:2,28:30:75.26:1638,75,0	1/1:8,16:24:39.13:848,39,0	1/1:3,21:24:66.18:1317,66,0	1/1:4,23:27:63.21:1302,63,0	1/1:4,30:34:84.29:1783,84,0	1/1:3,21:25:69.24:1489,69,0	0/0:22,0:22:60.19:0,60,926	0/0:23,0:23:60.20:0,60,951	1/1:3,21:25:60.21:1257,60,0	1/1:4,24:31:90.21:1760,90,0	1/1:5,21:25:57.20:1219,57,0	1/1:3,13:16:39.13:842,39,0
chr10	65271202	.	CAA	C	12337.57	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=16.062;DP=638;FS=11.241;HRun=7;HaplotypeScore=157.9262;InbreedingCoeff=0.9917;MQ=56.10;MQ0=21;MQRankSum=-6.490;QD=26.59;ReadPosRankSum=3.482;VQSLOD=3.1309;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,28:31:66.20:830,66,0	1/1:1,15:15:42.13:534,42,0	0/0:22,0:18:43.02:0,43,642	0/0:13,0:13:17.88:0,18,286	0/0:24,0:24:66.23:0,66,1100	1/1:4,21:25:54.17:687,54,0	1/1:3,14:14:27.08:343,27,0	1/1:7,28:29:69.21:869,69,0	0/0:15,0:15:42.14:0,42,704	0/0:23,0:22:63.18:0,63,993	0/0:9,0:9:22.49:0,22,415	1/1:6,19:22:48.11:604,48,0	0/0:25,0:25:69.24:0,69,1159	1/1:5,15:19:39.12:483,39,0	1/1:6,20:25:51.16:642,51,0	1/1:2,14:16:33.02:420,33,0	1/1:6,24:23:56.85:699,57,0	1/1:1,28:29:72.23:916,72,0	1/1:5,18:18:42.12:517,42,0	1/1:2,15:16:42.12:513,42,0	1/1:3,20:23:48.14:608,48,0	1/1:3,19:22:57.18:718,57,0	0/0:15,0:15:39.11:0,39,626	0/0:28,0:28:78.27:0,78,1339	1/1:5,27:28:69.22:874,69,0	1/1:5,21:24:10.80:710,11,0	1/1:1,19:18:39.12:493,39,0	1/1:1,26:25:69.22:875,69,0
chr10	65271390	.	G	GGT	276.25	PASS	AB=0.951;AC=13;AF=0.232;AN=56;BaseQRankSum=0.042;DP=589;FS=3.551;HRun=0;HaplotypeScore=137.2372;InbreedingCoeff=0.0112;MQ=70.24;MQ0=10;MQRankSum=3.110;QD=1.05;ReadPosRankSum=-1.803;VQSLOD=2.3279;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:25.75:0,26,180	0/0:11,0:10:17.28:0,17,100	0/0:35,0:22:18.38:0,18,156	0/0:30,0:24:26.02:0,26,238	0/0:21,0:21:45.13:0,45,527	0/0:20,0:20:23.45:0,23,157	0/1:24,1:25:70.25:70,0,100	1/1:22,0:21:7.70:66,8,0	0/0:18,0:20:56.68:0,57,596	0/1:14,0:15:6.46:6,0,62	0/1:11,0:13:11.08:11,0,19	0/0:25,0:25:33.75:0,34,227	0/0:20,0:21:50.96:0,51,556	0/1:14,0:14:1.82:2,0,96	0/0:8,0:8:14.83:0,15,100	0/0:15,0:15:0.73:0,1,127	0/1:29,1:30:14.20:14,0,152	0/1:17,17:34:20.69:205,0,21	0/1:17,0:15:20.24:20,0,27	1/1:10,0:10:1.55:4,2,0	0/1:45,0:45:1.11:1,0,236	0/0:5,0:5:8.90:0,9,59	0/0:21,0:21:45.14:0,45,539	0/1:35,1:37:12.63:13,0,893	0/0:16,0:16:14.86:0,15,116	0/0:18,0:18:6:0,6,69	0/0:13,0:13:17.49:0,17,115	0/0:6,0:5:6.13:0,6,34
chr10	65271406	.	TGTGC	T	2725.61	PASS	AB=0.965;AC=23;AF=0.411;AN=56;BaseQRankSum=-3.389;DP=601;FS=0.000;HRun=0;HaplotypeScore=150.9366;InbreedingCoeff=-0.6189;MQ=58.01;MQ0=13;MQRankSum=-1.967;QD=5.86;ReadPosRankSum=-11.365;VQSLOD=-0.2582;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:35,0:35:99:295,0,267	0/1:11,0:9:45.27:45,0,200	0/1:30,0:14:16.32:16,0,231	0/0:26,0:17:9.44:0,9,243	0/0:23,0:23:59.95:0,60,1154	0/1:15,0:15:16.88:17,0,304	0/1:29,1:30:99:214,0,348	0/1:18,0:18:99:196,0,104	0/1:21,0:21:10.11:10,0,949	0/1:9,6:15:12.90:274,0,13	0/1:8,6:14:1.03:89,0,1	0/1:26,1:27:99:147,0,462	0/0:22,0:22:23.69:0,24,946	0/1:19,0:19:99:166,0,169	0/1:10,0:10:25.93:26,0,213	0/1:15,0:15:60.36:60,0,341	0/1:25,0:25:99:131,0,346	0/1:33,0:32:99:136,0,203	0/1:21,0:19:82.15:263,0,82	0/1:9,1:10:3.08:112,0,3	0/1:47,0:47:99:284,0,590	0/1:5,0:5:33.88:34,0,123	0/0:21,0:19:50.14:0,50,1117	0/0:44,0:44:83.25:0,83,2094	0/1:23,0:23:72.96:73,0,324	0/1:18,0:17:99:122,0,207	0/1:14,1:15:99:122,0,227	0/1:8,0:7:50.06:50,0,63
chr10	65271408	.	TGC	T	4188.05	PASS	AB=0.964;AC=27;AF=0.482;AN=56;BaseQRankSum=-1.036;DP=602;FS=2.451;HRun=0;HaplotypeScore=125.5203;InbreedingCoeff=-0.4578;MQ=56.65;MQ0=13;MQRankSum=-1.587;QD=8.50;ReadPosRankSum=-10.535;VQSLOD=0.7329;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:32,3:35:66.26:368,0,66	0/1:11,1:10:55.45:89,0,55	0/1:29,0:13:10.43:10,0,187	0/1:26,0:15:8.38:8,0,116	0/0:23,0:23:60.01:0,60,853	0/1:14,1:15:63.57:64,0,114	0/1:28,2:30:74.45:236,0,74	1/1:20,0:20:28.96:351,29,0	0/0:21,0:21:10.83:0,11,683	0/1:15,0:15:16.27:151,0,16	0/1:13,1:14:16.05:37,0,16	0/1:25,1:26:99:240,0,118	0/1:22,0:22:5.79:6,0,696	0/1:17,2:19:15.66:307,0,16	0/1:11,0:11:51.08:77,0,51	0/1:15,0:15:99:120,0,106	0/1:21,3:24:82.88:261,0,83	0/1:33,0:32:10.88:172,0,11	1/1:23,0:21:10.83:343,11,0	1/1:10,0:10:4.11:116,4,0	0/1:45,0:45:99:468,0,153	0/1:5,0:5:34.12:34,0,39	0/0:21,0:19:50.10:0,50,815	0/0:44,0:44:48.48:0,48,1453	0/1:24,0:24:72.72:173,0,73	0/1:17,1:17:18.69:281,0,19	0/1:14,0:14:68.24:135,0,68	0/1:7,1:7:0.47:142,0,0
chr10	65271429	.	GCT	G	1113.72	PASS	AB=1.000;AC=18;AF=0.321;AN=56;BaseQRankSum=3.532;DP=542;FS=71.449;HRun=0;HaplotypeScore=126.9288;InbreedingCoeff=-0.2141;MQ=65.06;MQ0=3;MQRankSum=-0.810;QD=3.64;ReadPosRankSum=-1.826;VQSLOD=-0.2370;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:32,0:32:52.69:53,0,171	0/1:13,0:11:15.51:16,0,49	0/0:30,0:17:11.18:0,11,509	0/0:28,0:16:13.62:0,14,297	0/0:20,0:20:54.12:0,54,947	0/1:15,0:15:20.74:21,0,206	0/1:26,0:26:70.10:70,0,153	0/0:12,0:12:36.07:0,36,527	0/0:16,0:16:44.74:0,45,786	1/1:9,8:17:30.05:416,30,0	1/1:8,8:16:17.54:173,18,0	0/1:24,0:24:77.26:77,0,227	0/0:20,0:20:55.12:0,55,963	0/1:13,0:13:47.99:48,0,71	0/0:9,0:9:0.42:0,0,70	0/1:11,0:11:19.67:20,0,163	0/1:25,0:25:99:100,0,134	0/0:24,0:23:5.02:0,5,126	0/1:23,0:23:66.75:67,0,68	0/0:6,0:6:1.60:0,2,27	0/1:36,0:36:51.87:52,0,313	0/1:9,0:9:5.24:5,0,21	0/0:23,0:22:60.19:0,60,1069	0/0:35,0:35:98.12:0,98,1788	0/1:24,0:24:64.85:65,0,102	0/1:15,0:15:79.65:80,0,107	0/0:13,0:13:1.21:0,1,138	0/1:7,0:7:15.35:15,0,38
chr10	65274707	.	AC	A	658.66	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.449;DP=647;FS=18.671;HRun=7;HaplotypeScore=62.0875;InbreedingCoeff=0.9218;MQ=85.36;MQ0=1;MQRankSum=-2.173;QD=22.71;ReadPosRankSum=-4.213;VQSLOD=1.2498;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:81.21:0,81,989	0/0:5,0:5:15.05:0,15,189	0/0:22,0:22:54.14:0,54,650	0/0:21,0:21:51.06:0,51,591	0/0:8,0:8:24.08:0,24,302	0/0:17,0:17:42.13:0,42,528	0/0:31,0:30:87.25:0,87,1066	1/1:4,25:29:75.15:753,75,0	0/0:26,0:26:78.25:0,78,981	0/0:18,0:18:48.15:0,48,602	0/0:8,0:8:21.05:0,21,251	0/0:45,0:45:99:0,126,1516	0/0:29,0:29:75.23:0,75,933	0/0:40,0:40:99:0,111,1382	0/0:26,0:26:78.25:0,78,981	0/0:27,0:27:78.24:0,78,970	0/0:24,0:24:66.20:0,66,817	0/0:31,0:31:90.29:0,90,1131	0/0:24,0:24:69.20:0,69,844	0/0:8,0:8:21.07:0,21,263	0/0:45,0:44:99:0,120,1495	0/0:15,0:15:42.12:0,42,512	0/0:12,0:12:30.10:0,30,377	0/0:29,0:29:81.25:0,81,1007	0/0:12,0:12:33.09:0,33,400	0/0:25,0:25:69.22:0,69,868	0/0:31,0:31:81.23:0,81,992	0/0:4,0:3:9.03:0,9,112
chr10	65276941	.	GT	G	1141.82	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=10.695;DP=886;FS=1.227;HRun=4;HaplotypeScore=88.5796;InbreedingCoeff=0.7591;MQ=86.24;MQ0=0;MQRankSum=1.300;QD=17.04;ReadPosRankSum=-4.916;VQSLOD=2.4244;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,157,2180	0/0:19,0:19:57.16:0,57,778	0/0:33,0:33:54.58:0,55,990	0/1:27,0:27:1.70:2,0,659	0/0:27,0:27:75.24:0,75,1031	0/0:29,0:29:84.28:0,84,1176	0/0:27,0:27:75.23:0,75,1031	1/1:4,36:40:99:1236,108,0	0/0:32,0:32:96.31:0,96,1326	0/0:42,0:42:99:0,117,1632	0/0:15,0:15:45.14:0,45,613	0/0:52,0:52:99:0,150,2064	0/0:40,0:40:99:0,117,1636	0/0:38,0:38:99:0,111,1520	0/0:39,0:39:99:0,117,1622	0/0:42,0:42:99:0,123,1707	0/0:33,0:33:93.31:0,93,1302	0/0:19,0:19:57.17:0,57,780	0/0:25,0:25:66.22:0,66,924	0/0:31,0:31:90.26:0,90,1234	0/0:39,0:39:99:0,105,1431	0/0:18,0:18:54.18:0,54,756	0/0:34,0:34:99:0,102,1427	0/0:32,0:32:93.31:0,93,1302	0/0:23,0:23:63.20:0,63,866	0/0:35,0:35:99:0,99,1371	0/0:24,0:24:72.23:0,72,991	0/0:17,0:17:51.14:0,51,680
chr10	65278060	.	G	GC	1120.47	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-7.213;DP=821;FS=7.028;HRun=2;HaplotypeScore=82.0378;InbreedingCoeff=0.9915;MQ=70.20;MQ0=0;MQRankSum=-1.339;QD=33.95;ReadPosRankSum=-3.948;VQSLOD=1.9208;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,144,1752	0/0:10,0:10:30.09:0,30,372	0/0:38,0:38:94.90:0,95,1324	0/0:25,0:25:43.70:0,44,750	0/0:18,0:18:54.17:0,54,669	0/0:14,0:14:42.10:0,42,495	0/0:36,0:36:99:0,105,1302	1/1:3,30:33:87.27:1215,87,0	0/0:28,0:28:84.25:0,84,1029	0/0:36,0:36:99:0,105,1279	0/0:21,0:21:54.16:0,54,657	0/0:46,0:46:99:0,135,1674	0/0:27,0:27:78.24:0,78,967	0/0:35,0:35:99:0,102,1240	0/0:47,0:47:99:0,141,1735	0/0:25,0:25:75.21:0,75,904	0/0:27,0:27:81.25:0,81,1004	0/0:32,0:33:95.51:0,96,1160	0/0:30,0:30:78.23:0,78,956	0/0:25,0:25:72.21:0,72,879	0/0:38,0:38:99:0,108,1326	0/0:18,0:18:51.16:0,51,632	0/0:24,0:24:66.17:0,66,790	0/0:36,0:36:99:0,102,1265	0/0:30,0:30:81.24:0,81,992	0/0:37,0:37:99:0,108,1339	0/0:28,0:28:84.23:0,84,1016	0/0:6,0:6:18.06:0,18,223
chr10	65284408	.	T	TA	1100.09	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-5.510;DP=705;FS=2.279;HRun=7;HaplotypeScore=65.3749;InbreedingCoeff=0.9946;MQ=71.96;MQ0=0;MQRankSum=0.185;QD=29.73;ReadPosRankSum=-3.829;VQSLOD=2.6026;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,117,1130	0/0:7,0:7:21.03:0,21,203	0/0:21,0:21:27.47:0,27,388	0/0:15,0:14:31.78:0,32,278	0/0:30,0:30:66.09:0,66,632	0/0:32,0:32:81.11:0,81,782	0/0:17,0:17:45.07:0,45,435	1/1:4,33:37:99:1195,99,0	0/0:20,0:20:54.09:0,54,521	0/0:30,0:30:90.02:0,90,855	0/0:33,0:33:78.11:0,78,753	0/0:24,0:24:66.08:0,66,631	0/0:17,0:17:45.07:0,45,435	0/0:18,0:18:54.07:0,54,515	0/0:24,0:24:69.11:0,69,666	0/0:21,0:21:63.10:0,63,608	0/0:18,0:18:51.08:0,51,492	0/0:16,0:16:45.05:0,45,427	0/0:21,0:21:48.04:0,48,456	0/0:34,0:34:87.12:0,87,834	0/0:27,0:27:78.09:0,78,745	0/0:37,0:37:99:0,105,1002	0/0:28,0:28:75.11:0,75,724	0/0:27,0:27:71.80:0,72,695	0/0:21,0:21:54.08:0,54,521	0/0:33,0:33:96.15:0,96,927	0/0:24,0:24:66.10:0,66,637	0/0:28,0:28:81.13:0,81,782
chr10	65284593	.	C	CA	1262.80	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=0.488;DP=776;FS=2.322;HRun=1;HaplotypeScore=78.9352;InbreedingCoeff=0.9995;MQ=76.76;MQ0=0;MQRankSum=-3.867;QD=37.14;ReadPosRankSum=-4.528;VQSLOD=2.2609;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:58:99:0,172,2186	0/0:15,0:15:45.15:0,45,583	0/0:20,0:20:54.17:0,54,690	0/0:36,0:35:90.28:0,90,1148	0/0:27,0:27:75.24:0,75,973	0/0:23,0:23:66.21:0,66,857	0/0:33,0:33:96.28:0,96,1217	1/1:6,28:34:93.30:1358,93,0	0/0:27,0:27:81.26:0,81,1051	0/0:23,0:23:69.22:0,69,896	0/0:18,0:18:54.18:0,54,700	0/0:39,0:39:99:0,108,1374	0/0:22,0:22:66.20:0,66,841	0/0:24,0:24:72.23:0,72,935	0/0:26,0:26:78.25:0,78,1013	0/0:34,0:34:99:0,99,1285	0/0:34,0:34:99:0,102,1309	0/0:30,0:30:87.22:0,87,1081	0/0:22,0:22:66.21:0,66,855	0/0:21,0:21:60.18:0,60,765	0/0:45,0:45:99:0,135,1722	0/0:25,0:25:66.21:0,66,855	0/0:23,0:23:66.21:0,66,856	0/0:33,0:33:99:0,99,1265	0/0:16,0:16:48.16:0,48,623	0/0:28,0:28:78.25:0,78,1012	0/0:29,0:28:87.28:0,87,1125	0/0:11,0:11:30.10:0,30,390
chr10	65284614	.	TC	T	1145.58	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.589;DP=779;FS=9.457;HRun=3;HaplotypeScore=79.8030;InbreedingCoeff=0.9994;MQ=76.13;MQ0=0;MQRankSum=-4.362;QD=30.96;ReadPosRankSum=-4.006;VQSLOD=1.3212;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,157,2246	0/0:11,0:11:30.10:0,30,430	0/0:17,0:17:51.17:0,51,724	0/0:27,0:27:71.85:0,72,1027	0/0:28,0:28:78.23:0,78,1084	0/0:26,0:26:75.25:0,75,1080	0/0:31,0:31:93.31:0,93,1339	1/1:4,33:37:99:1240,102,0	0/0:25,0:25:72.23:0,72,1018	0/0:25,0:25:75.25:0,75,1080	0/0:19,0:19:57.19:0,57,820	0/0:44,0:44:99:0,129,1856	0/0:20,0:20:60.20:0,60,860	0/0:24,0:24:69.22:0,69,973	0/0:28,0:28:84.28:0,84,1210	0/0:33,0:33:99:0,99,1407	0/0:31,0:31:93.31:0,93,1338	0/0:33,0:33:96.32:0,96,1382	0/0:19,0:19:57.14:0,57,779	0/0:24,0:24:72.24:0,72,1033	0/0:49,0:49:99:0,144,2056	0/0:29,0:29:78.26:0,78,1120	0/0:21,0:21:63.21:0,63,905	0/0:29,0:29:87.28:0,87,1235	0/0:19,0:19:57.16:0,57,782	0/0:35,0:35:99:0,102,1463	0/0:28,0:28:84.25:0,84,1167	0/0:14,0:14:36.12:0,36,518
chr10	65285577	.	G	GA	10216.73	PASS	AB=0.571;AC=39;AF=0.696;AN=56;BaseQRankSum=-10.287;DP=592;FS=1.179;HRun=9;HaplotypeScore=58.8389;InbreedingCoeff=0.9051;MQ=66.24;MQ0=1;MQRankSum=0.661;QD=23.87;ReadPosRankSum=1.786;VQSLOD=5.7331;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,24:29:34.11:604,34,0	1/1:1,6:7:15.04:166,15,0	0/0:16,0:15:15.07:0,15,192	0/0:14,0:12:14.41:0,14,124	0/0:19,0:19:49.21:0,49,416	1/1:0,15:15:42.11:465,42,0	1/1:3,20:23:54.15:597,54,0	0/0:33,0:33:86.70:0,87,738	0/0:24,0:24:65.96:0,66,569	1/1:3,1:26:59.63:309,60,0	1/1:6,0:25:50.87:249,51,0	1/1:3,18:21:51.14:564,51,0	0/0:20,0:20:50.95:0,51,436	1/1:3,18:21:48.13:531,48,0	1/1:7,28:35:68.86:791,69,0	1/1:5,14:19:16.06:405,16,0	1/1:3,27:30:75.20:830,75,0	1/1:2,27:29:72.19:796,72,0	1/1:1,23:25:69.15:744,69,0	1/1:1,14:15:19.16:421,19,0	0/1:4,12:16:16.02:296,0,16	1/1:0,12:12:33.05:351,33,0	0/0:19,0:19:47.99:0,48,416	0/0:19,0:19:56.99:0,57,495	1/1:1,23:24:63.17:697,63,0	1/1:0,18:21:59.81:615,60,0	1/1:3,17:20:54.13:586,54,0	1/1:0,14:14:18.05:199,18,0
chr10	65285860	.	AAC	A	6637.62	PASS	AB=0.976;AC=35;AF=0.625;AN=56;BaseQRankSum=1.984;DP=651;FS=4.441;HRun=0;HaplotypeScore=126.3988;InbreedingCoeff=0.5152;MQ=75.20;MQ0=19;MQRankSum=-2.117;QD=16.07;ReadPosRankSum=5.858;VQSLOD=4.7919;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:28,1:29:39.51:498,40,0	1/1:4,0:4:5.48:56,5,0	0/0:57,0:29:55.38:0,55,826	0/0:60,0:45:89.58:0,90,1335	0/0:17,0:16:36.02:0,36,498	1/1:13,0:13:20.66:250,21,0	0/1:31,1:30:6.20:448,0,6	0/0:24,0:24:69.22:0,69,1084	0/0:24,0:24:62.97:0,63,958	1/1:14,0:14:13.57:333,14,0	1/1:11,1:11:26.50:274,26,0	0/1:35,2:37:0.45:505,0,0	0/0:21,0:21:57.18:0,57,883	1/1:20,0:19:22.71:357,23,0	1/1:24,0:24:15.35:313,15,0	1/1:20,0:19:8.51:311,9,0	1/1:30,0:29:25.22:609,25,0	0/1:22,0:21:2.53:508,0,3	0/1:12,0:12:27.17:234,0,27	1/1:11,0:10:17.93:180,18,0	1/1:47,0:45:43.91:508,44,0	1/1:10,0:10:27.05:337,27,0	0/1:10,0:10:10.05:10,0,379	0/0:35,0:35:89.27:0,89,1240	1/1:23,0:22:22.60:354,23,0	1/1:25,0:25:15.12:436,15,0	0/1:10,1:11:46.56:101,0,47	0/1:7,0:7:12.98:17,0,13
chr10	65287982	.	T	TCTCTCC	22853.05	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=-3.251;DP=755;FS=2.954;HRun=0;HaplotypeScore=156.9692;InbreedingCoeff=0.9780;MQ=64.95;MQ0=2;MQRankSum=-13.053;QD=41.10;ReadPosRankSum=-2.472;VQSLOD=4.5472;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:27,16:44:45.15:1300,45,0	1/1:8,0:10:9.03:261,9,0	0/0:41,0:35:26.67:0,27,460	0/0:23,0:16:14.86:0,15,292	0/0:21,0:21:45.14:0,45,902	1/1:10,16:27:39.13:1278,39,0	1/1:23,13:39:42.14:1292,42,0	1/1:24,2:28:21.06:502,21,0	0/0:26,0:26:63.21:0,63,1282	1/1:9,14:27:54.11:1431,54,0	1/1:6,8:16:21.07:624,21,0	1/1:16,26:44:87.16:2544,87,0	0/0:25,0:25:63.22:0,63,1316	1/1:11,20:31:57.19:1836,57,0	1/1:6,21:28:51:1660,51,0	1/1:16,14:31:45.07:1319,45,0	1/1:16,8:26:36.08:1055,36,0	1/1:9,6:18:17.98:509,18,0	1/1:10,3:15:21.06:479,21,0	1/1:9,7:17:18.06:554,18,0	1/1:28,10:40:27.51:593,28,0	1/1:12,16:29:48.16:1496,48,0	0/0:14,0:14:30.09:0,30,591	0/0:49,0:49:99:0,114,2347	1/1:8,12:22:42.14:1284,42,0	1/1:13,13:30:51.14:1240,51,0	1/1:7,14:23:36.09:1104,36,0	1/1:5,5:11:15.05:492,15,0
chr10	65288371	.	ATTT	A	8151.14	PASS	AB=0.728;AC=41;AF=0.732;AN=56;BaseQRankSum=4.890;DP=548;FS=15.046;HRun=15;HaplotypeScore=87.3917;InbreedingCoeff=0.7313;MQ=71.07;MQ0=2;MQRankSum=0.235;QD=19.27;ReadPosRankSum=4.540;VQSLOD=2.2677;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,20:30:26.56:405,27,0	0/1:2,6:9:5.29:179,0,5	0/0:32,0:21:25.33:0,25,261	0/1:21,0:12:31.59:32,0,44	0/0:26,0:28:72.12:0,72,1087	1/1:3,20:23:21.96:417,22,0	1/1:5,20:26:53.90:588,54,0	1/1:5,9:14:8.91:240,9,0	0/0:14,0:14:42.13:0,42,710	1/1:3,22:25:63.03:691,63,0	1/1:4,14:18:35.93:404,36,0	1/1:1,13:16:33.01:398,33,0	0/0:21,0:22:61.02:0,61,954	1/1:3,9:12:21:236,21,0	1/1:2,7:9:17.97:202,18,0	1/1:4,14:19:37.43:434,37,0	1/1:6,27:33:57.04:639,57,0	1/1:3,14:18:29.97:320,30,0	1/1:4,12:17:34.48:399,34,0	1/1:6,17:23:38.79:437,39,0	1/1:5,14:19:23.93:269,24,0	0/1:11,17:28:21.11:332,0,21	0/0:11,0:14:30.07:0,30,478	0/0:14,0:15:39.06:0,39,579	1/1:7,12:19:35.86:404,36,0	1/1:2,18:20:51.14:571,51,0	1/1:4,10:15:32.94:354,33,0	1/1:2,6:9:16.45:199,16,0
chr10	65288539	.	G	GA	398.04	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-4.524;DP=635;FS=5.820;HRun=9;HaplotypeScore=67.7804;InbreedingCoeff=0.9789;MQ=79.02;MQ0=0;MQRankSum=1.847;QD=18.95;ReadPosRankSum=-3.990;VQSLOD=2.5111;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:62.94:0,63,547	0/0:13,0:13:35.98:0,36,308	0/0:14,0:15:18.22:0,18,109	0/0:22,0:22:33.82:0,34,276	0/0:23,0:23:65.97:0,66,569	0/0:17,0:17:44.99:0,45,391	0/0:19,0:19:47.99:0,48,417	1/1:3,18:21:27.99:492,28,0	0/0:27,0:27:47.28:0,47,501	0/0:26,0:26:65.95:0,66,566	0/0:11,0:11:23.98:0,24,208	0/0:31,0:31:74.97:0,75,651	0/0:25,1:26:26.80:0,27,462	0/0:20,0:20:50.99:0,51,443	0/0:34,0:34:77.96:0,78,677	0/0:33,0:33:89.97:0,90,781	0/0:40,0:40:99:0,105,907	0/0:24,0:24:62.95:0,63,540	0/0:14,0:15:32.01:0,32,266	0/0:20,0:20:56.99:0,57,495	0/0:31,0:31:80.95:0,81,702	0/0:18,0:18:47.99:0,48,416	0/0:13,0:13:38.99:0,39,338	0/0:29,1:30:44.78:0,45,618	0/0:16,0:16:44.98:0,45,391	0/0:26,0:26:56.96:0,57,491	0/0:21,1:22:17.77:0,18,380	0/0:10,0:10:29.99:0,30,260
chr10	65289463	.	CACATACAT	C	7901.87	PASS	AB=0.865;AC=39;AF=0.750;AN=52;BaseQRankSum=6.287;DP=589;FS=4.317;HRun=0;HaplotypeScore=156.0082;InbreedingCoeff=0.7609;MQ=57.07;MQ0=6;MQRankSum=-9.036;QD=19.46;ReadPosRankSum=1.566;VQSLOD=4.1651;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:16,8:24:9.03:206,9,0	./.	0/0:33,0:20:3.01:0,3,70	./.	0/0:8,0:24:35.92:0,36,294	1/1:11,9:20:9.03:225,9,0	1/1:11,11:22:21.07:424,21,0	0/1:27,0:32:40.11:67,0,40	0/0:22,0:22:45.15:0,45,1692	1/1:8,0:22:32.98:543,33,0	1/1:3,0:17:27.09:503,27,0	1/1:8,9:17:24.08:601,24,0	0/0:20,0:21:33.08:0,33,1147	1/1:7,6:13:15.05:356,15,0	1/1:6,4:10:6.02:150,6,0	1/1:6,8:14:18.06:412,18,0	1/1:21,8:29:9.03:225,9,0	1/1:6,7:13:9.03:226,9,0	1/1:10,4:13:12.01:247,12,0	1/1:7,16:23:36.12:860,36,0	1/1:13,10:24:6.02:106,6,0	1/1:11,12:24:29.34:722,29,0	0/0:21,0:23:45.12:0,45,1539	0/0:34,0:34:44.95:0,45,1550	1/1:10,13:24:29.59:664,30,0	1/1:9,12:20:33.06:763,33,0	1/1:13,14:26:12.04:301,12,0	1/1:11,4:15:12.04:299,12,0
chr10	65292115	.	G	GC	2076.29	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-3.998;DP=594;FS=0.551;HRun=0;HaplotypeScore=64.5638;InbreedingCoeff=0.9873;MQ=80.59;MQ0=0;MQRankSum=-1.605;QD=39.93;ReadPosRankSum=-3.509;VQSLOD=2.5734;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:42:99:0,123,1624	0/0:7,0:7:21.07:0,21,293	0/0:23,0:23:66.19:0,66,872	0/0:22,0:22:66.19:0,66,889	0/0:21,0:21:60.17:0,60,799	0/0:23,0:23:69.23:0,69,961	0/0:27,0:27:81.26:0,81,1117	1/1:1,28:29:84.28:1317,84,0	0/0:19,0:19:57.19:0,57,797	1/1:1,16:17:45.15:707,45,0	1/1:1,5:6:12.04:191,12,0	0/0:28,0:28:84.28:0,84,1174	0/0:21,0:21:60.17:0,60,811	0/0:18,0:18:51.17:0,51,713	0/0:27,0:27:78.25:0,78,1071	0/0:21,0:21:60.18:0,60,821	0/0:30,0:29:84.23:0,84,1134	0/0:25,0:25:72.24:0,72,1002	0/0:14,0:14:42.12:0,42,549	0/0:20,0:20:60.20:0,60,835	0/0:24,0:24:69.21:0,69,942	0/0:19,0:19:51.17:0,51,711	0/0:13,0:13:39.12:0,39,527	0/0:30,0:30:61.80:0,62,1146	0/0:14,0:14:42.13:0,42,571	0/0:22,0:22:66.22:0,66,917	0/0:17,0:17:51.17:0,51,712	0/0:14,0:14:33.11:0,33,455
chr10	65292493	.	C	CAG	1614.05	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-0.593;DP=851;FS=0.556;HRun=0;HaplotypeScore=117.1636;InbreedingCoeff=0.9365;MQ=59.57;MQ0=15;MQRankSum=-4.396;QD=19.21;ReadPosRankSum=-4.319;VQSLOD=2.8701;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:80.75:0,81,924	0/0:15,0:15:33.05:0,33,362	0/0:41,0:10:4.05:0,4,39	0/0:66,0:23:20.72:0,21,172	0/0:29,0:29:56.98:0,57,655	0/0:32,0:32:71.20:0,71,810	0/0:31,0:31:48.10:0,48,555	1/1:17,25:41:48.59:838,49,0	0/0:32,0:32:78.04:0,78,912	1/1:9,18:27:40.78:675,41,0	1/1:5,10:15:12.44:240,12,0	0/0:31,0:31:87.21:0,87,1015	0/0:27,0:28:69.04:0,69,818	0/0:25,0:25:66.13:0,66,741	0/0:34,0:33:84.01:0,84,973	0/0:39,0:39:96.06:0,96,1070	0/0:32,0:32:90.64:0,91,973	0/0:24,0:24:51.06:0,51,560	0/0:14,0:13:23.94:0,24,244	0/0:18,0:19:43.52:0,44,461	0/0:51,0:49:99:0,118,1328	0/0:26,0:26:50.96:0,51,551	0/0:18,0:18:35.85:0,36,432	0/0:36,0:36:66.12:0,66,739	0/0:18,0:18:25.86:0,26,372	0/0:31,0:31:57.05:0,57,676	0/0:34,0:33:78.11:0,78,881	0/0:15,0:15:42.13:0,42,520
chr10	65294470	.	GTATA	G	14581.56	PASS	AB=0.964;AC=54;AF=0.964;AN=56;BaseQRankSum=-2.998;DP=604;FS=0.000;HRun=0;HaplotypeScore=123.3444;InbreedingCoeff=-0.0472;MQ=65.57;MQ0=4;MQRankSum=0.537;QD=24.14;ReadPosRankSum=3.881;VQSLOD=4.4923;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,36:37:39.13:713,39,0	1/1:0,11:11:15.01:274,15,0	0/1:12,0:7:40.50:67,0,41	0/1:24,0:14:25.09:92,0,25	1/1:0,30:28:33.11:603,33,0	1/1:1,19:20:36.12:658,36,0	1/1:1,22:23:15.05:275,15,0	1/1:27,3:30:73.41:635,73,0	1/1:0,14:14:21.07:384,21,0	1/1:13,3:16:42.59:424,43,0	1/1:10,7:17:2.98:147,3,0	1/1:2,16:18:27.09:494,27,0	1/1:0,13:12:21.07:384,21,0	1/1:1,28:28:45.15:822,45,0	1/1:1,19:19:24.08:439,24,0	1/1:1,18:19:36.12:659,36,0	1/1:3,27:30:40.38:716,40,0	1/1:1,27:28:39.13:713,39,0	1/1:3,21:24:49.88:788,50,0	1/1:0,18:18:21.07:384,21,0	1/1:0,13:13:27.09:494,27,0	1/1:2,20:21:15.52:275,16,0	1/1:4,18:22:24.08:439,24,0	1/1:0,18:18:12.04:220,12,0	1/1:1,33:34:78.27:1427,78,0	1/1:2,29:31:89.70:1232,90,0	1/1:0,18:18:24.08:439,24,0	1/1:0,11:11:21.07:384,21,0
chr10	65294474	.	A	ATG	1193.07	PASS	AB=0.991;AC=13;AF=0.232;AN=56;BaseQRankSum=-0.098;DP=603;FS=1.048;HRun=0;HaplotypeScore=161.3600;InbreedingCoeff=-0.0453;MQ=66.70;MQ0=4;MQRankSum=-3.904;QD=4.64;ReadPosRankSum=-9.755;VQSLOD=0.2135;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:25.73:0,26,105	0/0:11,0:11:12.66:0,13,47	0/1:12,0:7:22.33:22,0,104	0/1:25,0:15:9.17:9,0,68	0/1:30,0:28:18.73:19,0,48	0/0:19,0:19:0.25:0,0,73	0/0:22,0:22:12.58:0,13,47	0/1:31,0:31:99:295,0,418	0/0:15,0:15:17.87:0,18,66	0/1:17,2:19:2.76:491,0,3	1/1:14,6:20:28.23:333,28,0	0/1:17,0:17:14.92:15,0,43	0/0:13,0:12:17.87:0,18,66	0/0:29,0:28:38.24:0,38,141	0/0:19,0:18:20.06:0,20,76	0/1:18,0:18:0.34:0,0,73	0/0:30,0:29:13.18:0,13,100	0/0:27,0:27:32.64:0,33,123	0/1:23,0:23:48.93:49,0,245	0/0:18,0:18:17.67:0,18,66	0/1:13,0:13:7.74:8,0,52	0/0:21,0:20:12.58:0,13,47	0/0:21,0:21:20.36:0,20,76	0/1:18,0:18:17.63:19,0,18	0/0:34,0:34:65.16:0,65,244	0/1:30,0:30:82.48:82,0,209	0/0:20,0:20:20.16:0,20,75	0/0:11,0:11:17.87:0,18,66
chr10	65294489	.	T	TATATAG	4395.79	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-6.531;DP=672;FS=0.496;HRun=0;HaplotypeScore=200.0596;InbreedingCoeff=0.9710;MQ=71.36;MQ0=2;MQRankSum=-7.735;QD=48.84;ReadPosRankSum=-2.903;VQSLOD=4.3523;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:48.08:0,48,920	0/0:8,0:8:14.91:0,15,276	0/0:23,0:17:25.73:0,26,336	0/0:33,0:24:14.23:0,14,487	0/0:32,0:30:36.11:0,36,721	0/0:19,0:19:36.09:0,36,699	0/0:24,0:24:33.07:0,33,591	1/1:7,34:46:99:2289,120,0	0/0:17,0:17:36.10:0,36,717	1/1:8,14:24:66.10:1776,66,0	1/1:12,7:20:12.02:331,12,0	0/0:19,0:19:33.10:0,33,653	0/0:17,0:16:33.08:0,33,628	0/0:30,0:29:57.17:0,57,1147	0/0:23,0:22:39.07:0,39,679	0/0:16,0:16:30.09:0,30,628	0/0:28,0:27:48.11:0,48,925	0/0:28,0:28:39.09:0,39,780	0/0:21,0:21:51.13:0,51,1040	0/0:15,0:15:30.09:0,30,588	0/0:15,0:15:27.06:0,27,517	0/0:20,0:19:17.72:0,18,383	0/0:21,0:21:45.08:0,45,766	0/0:20,0:20:27.05:0,27,532	0/0:39,0:39:78.12:0,78,1274	0/0:33,0:33:90.31:0,90,1967	0/0:28,0:28:51.13:0,51,1010	0/0:13,0:13:27.09:0,27,579
chr10	65297170	.	A	AAAAAAAAAAT	3424.12	PASS	AB=1.000;AC=4;AF=0.071;AN=56;BaseQRankSum=-0.077;DP=646;FS=0.000;HRun=0;HaplotypeScore=227.6509;InbreedingCoeff=0.4440;MQ=67.66;MQ0=3;MQRankSum=-6.290;QD=46.91;ReadPosRankSum=-1.742;VQSLOD=2.9814;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:94.42:0,94,1799	0/0:8,0:8:11.98:0,12,201	0/0:31,0:17:22.51:0,23,186	0/0:19,0:13:12.77:0,13,100	0/0:25,0:25:69.89:0,70,1198	0/0:32,0:32:69.06:0,69,1206	0/0:22,0:22:63.11:0,63,1274	1/1:22,13:34:54.95:2420,55,0	0/0:25,0:25:56:0,56,759	0/1:25,0:24:71.52:605,0,72	0/1:13,0:13:26.16:399,0,26	0/0:20,0:20:38.99:0,39,552	0/0:20,0:20:30.03:0,30,444	0/0:19,0:19:32.82:0,33,460	0/0:26,0:26:62.35:0,62,884	0/0:30,0:30:71.99:0,72,1257	0/0:28,0:28:74.56:0,75,1241	0/0:29,0:29:72.04:0,72,1302	0/0:14,0:13:27.04:0,27,382	0/0:20,0:20:44.86:0,45,570	0/0:20,0:19:33.23:0,33,577	0/0:18,0:18:21.93:0,22,372	0/0:21,0:21:45.98:0,46,938	0/0:27,0:25:68.40:0,68,1276	0/0:24,0:24:45.10:0,45,869	0/0:22,0:22:50.95:0,51,843	0/0:16,0:16:35.96:0,36,531	0/0:9,0:9:23.60:0,24,272
chr10	65298623	.	A	AC	150.08	PASS	AB=0.830;AC=3;AF=0.054;AN=56;BaseQRankSum=7.299;DP=425;FS=2.064;HRun=0;HaplotypeScore=62.1307;InbreedingCoeff=-0.0309;MQ=59.78;MQ0=21;MQRankSum=-4.872;QD=3.49;ReadPosRankSum=0.561;VQSLOD=2.9528;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:59.85:0,60,784	0/0:6,0:6:18.06:0,18,251	0/0:31,0:10:3.47:0,3,270	0/0:37,0:7:14.63:0,15,159	0/0:21,0:21:63.21:0,63,879	0/0:11,0:11:33.11:0,33,461	0/0:9,0:9:24.08:0,24,335	0/1:14,0:9:16.28:16,0,139	0/0:16,0:16:45.15:0,45,629	0/1:6,6:16:46.52:220,0,47	0/1:4,4:12:0.97:1,0,12	0/0:18,0:18:48.05:0,48,635	0/0:15,0:15:42.14:0,42,585	0/0:13,0:13:36.12:0,36,503	0/0:15,0:15:45.14:0,45,609	0/0:14,0:14:39.13:0,39,541	0/0:15,0:15:45.11:0,45,584	0/0:7,0:7:21.07:0,21,289	0/0:12,0:12:36.12:0,36,503	0/0:13,0:13:39.13:0,39,543	0/0:22,0:22:66.22:0,66,921	0/0:11,0:11:27.09:0,27,377	0/0:11,0:11:33.11:0,33,459	0/0:9,0:9:24.08:0,24,335	0/0:10,0:9:30.10:0,30,419	0/0:19,0:19:57.16:0,57,760	0/0:14,0:14:42.14:0,42,584	0/0:12,0:12:34.66:0,35,460
chr10	65298630	.	G	GAC	892.68	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=9.769;DP=462;FS=1.421;HRun=0;HaplotypeScore=76.1678;InbreedingCoeff=0.7898;MQ=53.05;MQ0=23;MQRankSum=-8.946;QD=14.88;ReadPosRankSum=-1.852;VQSLOD=2.8285;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:58.12:0,58,853	0/0:6,0:6:18.06:0,18,275	0/0:26,0:4:5.18:0,5,82	0/0:46,0:7:8.44:0,8,94	0/0:20,0:20:53.87:0,54,776	0/0:11,0:11:33.04:0,33,435	0/0:9,0:9:21.06:0,21,299	1/1:2,21:18:50.89:578,51,0	0/0:20,0:20:54.12:0,54,725	1/1:20,1:20:38.72:434,39,0	0/1:16,0:16:4.65:7,0,5	0/0:19,0:19:51.12:0,51,692	0/0:16,0:16:39.03:0,39,482	0/0:14,0:14:36.04:0,36,458	0/0:12,0:12:30.10:0,30,457	0/0:15,0:15:45.07:0,45,594	0/0:17,0:17:51.04:0,51,642	0/0:8,0:8:21.02:0,21,270	0/0:14,0:14:35.97:0,36,378	0/0:14,0:14:42.06:0,42,516	0/0:27,0:27:69.12:0,69,933	0/0:9,0:9:24.07:0,24,345	0/0:12,0:12:36.09:0,36,504	0/0:10,0:10:27.01:0,27,361	0/0:10,0:9:30.06:0,30,396	0/0:16,0:16:45.57:0,46,575	0/0:13,0:13:39.13:0,39,594	0/0:15,0:15:40.26:0,40,447
chr10	65298735	.	AT	A	1753.25	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=11.128;DP=537;FS=10.380;HRun=7;HaplotypeScore=59.2438;InbreedingCoeff=0.9987;MQ=77.85;MQ0=0;MQRankSum=-1.756;QD=23.69;ReadPosRankSum=-1.200;VQSLOD=2.8482;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:60.19:0,60,755	0/0:9,0:9:27.06:0,27,323	0/0:12,0:12:30.09:0,30,366	0/0:13,0:13:30.04:0,30,320	0/0:17,0:17:45.12:0,45,541	0/0:31,0:31:81.25:0,81,1006	0/0:19,0:19:54.13:0,54,662	1/1:3,22:24:63.14:641,63,0	0/0:27,0:27:75.23:0,75,931	1/1:2,26:28:69.15:704,69,0	1/1:1,20:21:54.12:551,54,0	0/0:13,0:13:26.96:0,27,340	0/0:15,0:15:42.13:0,42,528	0/0:21,0:21:60.19:0,60,755	0/0:17,0:17:48.14:0,48,591	0/0:12,0:12:36.11:0,36,441	0/0:26,0:26:66.21:0,66,829	0/0:19,0:19:54.17:0,54,679	0/0:17,0:17:42.13:0,42,517	0/0:19,0:19:51.15:0,51,628	0/0:19,0:19:51.13:0,51,613	0/0:23,0:23:60.19:0,60,752	0/0:17,0:17:51.16:0,51,642	0/0:19,0:19:54.17:0,54,679	0/0:16,0:16:42.13:0,42,517	0/0:15,0:15:39.12:0,39,491	0/0:27,0:27:75.24:0,75,943	0/0:15,0:15:33.11:0,33,415
chr10	65299032	.	GGAAGA	G	1017.39	PASS	AB=0.862;AC=7;AF=0.125;AN=56;BaseQRankSum=7.408;DP=556;FS=12.125;HRun=0;HaplotypeScore=109.1671;InbreedingCoeff=0.7600;MQ=74.16;MQ0=0;MQRankSum=-7.209;QD=22.61;ReadPosRankSum=1.098;VQSLOD=2.8657;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,120,3578	0/0:4,0:4:12.04:0,12,400	0/0:11,0:11:33.11:0,33,1008	0/0:10,0:10:27.09:0,27,796	0/0:15,0:15:42.13:0,42,1283	0/0:26,0:26:75.26:0,75,2403	0/0:28,0:28:84.27:0,84,2699	1/1:1,7:8:18.06:393,18,0	0/0:19,0:19:57.20:0,57,1760	1/1:2,8:10:24.08:513,24,0	1/1:0,2:2:3.01:63,3,0	0/0:24,0:24:72.23:0,72,2244	0/0:15,0:15:45.15:0,45,1473	0/0:20,0:20:60.21:0,60,1903	0/0:28,0:28:84.27:0,84,2661	0/0:13,0:13:39.12:0,39,1221	0/0:43,0:43:99:0,129,4162	0/0:21,0:21:63.22:0,63,2054	0/0:19,0:19:51.16:0,51,1490	0/0:13,0:13:39.13:0,39,1227	0/0:50,0:50:99:0,147,4495	0/0:19,0:19:54.09:0,54,1510	0/0:20,0:20:57.18:0,57,1758	0/0:24,0:24:72.25:0,72,2399	0/0:19,0:19:54.16:0,54,1601	0/1:21,4:25:99:186,0,1815	0/0:18,0:18:54.19:0,54,1692	0/0:8,0:8:24.05:0,24,720
chr10	65299040	.	GAAAGT	G	1093.23	PASS	AB=0.857;AC=7;AF=0.125;AN=56;BaseQRankSum=7.756;DP=526;FS=13.648;HRun=0;HaplotypeScore=102.9001;InbreedingCoeff=0.7896;MQ=75.14;MQ0=0;MQRankSum=-6.860;QD=25.42;ReadPosRankSum=-0.108;VQSLOD=2.4138;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,111,3426	0/0:5,0:5:15.05:0,15,485	0/0:11,0:11:30.10:0,30,907	0/0:10,0:10:24.08:0,24,720	0/0:11,0:11:33.11:0,33,1066	0/0:22,0:22:66.23:0,66,2125	0/0:29,0:29:84.29:0,84,2620	1/1:0,7:7:18.06:393,18,0	0/0:21,0:21:63.22:0,63,1993	1/1:2,8:10:27.09:556,27,0	1/1:0,2:2:6.02:96,6,0	0/0:22,0:22:60.21:0,60,1911	0/0:15,0:15:42.14:0,42,1351	0/0:20,0:20:60.18:0,60,1817	0/0:26,0:26:78.27:0,78,2477	0/0:12,0:12:36.12:0,36,1163	0/0:44,0:44:99:0,132,4149	0/0:20,0:20:60.18:0,60,1815	0/0:18,0:18:54.19:0,54,1644	0/0:15,0:15:45.15:0,45,1391	0/0:46,0:46:99:0,138,4323	0/0:16,0:16:48.16:0,48,1498	0/0:16,0:16:48.16:0,48,1542	0/0:26,0:26:78.27:0,78,2461	0/0:16,0:16:48.14:0,48,1477	0/1:20,4:24:99:189,0,1860	0/0:16,0:16:45.15:0,45,1359	0/0:8,0:8:21.06:0,21,548
chr10	65299263	.	TTC	T	433.92	PASS	AB=0.987;AC=23;AF=0.411;AN=56;BaseQRankSum=6.138;DP=622;FS=3.164;HRun=0;HaplotypeScore=114.7584;InbreedingCoeff=-0.0654;MQ=55.09;MQ0=20;MQRankSum=-1.247;QD=1.06;ReadPosRankSum=0.046;VQSLOD=1.7834;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:23:29.99:30,0,74	0/1:10,0:10:21.88:22,0,31	1/1:18,0:11:0.47:1,0,0	0/1:29,0:14:0:0,0,0	0/0:32,0:32:25.69:0,26,314	0/0:25,0:25:11.05:0,11,158	0/0:31,0:30:17.52:0,18,193	0/0:25,0:25:0.99:0,1,51	0/1:17,2:19:3.11:3,0,304	0/1:21,0:20:31.85:87,0,32	1/1:20,0:19:0.29:14,0,0	0/0:16,0:14:7.39:0,7,36	0/0:20,0:20:18:0,18,226	0/1:22,0:20:8.09:70,0,8	0/1:25,0:24:11.54:51,0,12	1/1:21,0:19:7.74:55,8,0	0/1:22,0:19:18.31:18,0,26	0/0:23,0:23:30.07:0,30,394	0/0:24,0:23:3.51:0,4,93	0/1:20,0:19:15.02:48,0,15	0/0:6,0:5:4.55:0,5,28	1/1:28,0:28:15.65:108,16,0	0/1:25,1:24:11.17:11,0,240	0/1:30,1:30:8.54:9,0,497	0/0:12,0:11:7.87:0,8,72	0/1:25,0:23:24.14:24,0,73	0/1:16,0:13:17.83:18,0,48	1/1:29,0:29:2.94:18,3,0
chr10	65299301	.	CTCTTTCTT	C	2777.53	PASS	AB=1.000;AC=26;AF=0.500;AN=52;BaseQRankSum=-3.794;DP=515;FS=9.770;HRun=0;HaplotypeScore=149.2974;InbreedingCoeff=0.5652;MQ=48.90;MQ0=22;MQRankSum=5.175;QD=10.60;ReadPosRankSum=0.429;VQSLOD=2.2038;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:25:1.71:390,2,0	0/1:5,0:5:2.63:9,0,3	./.	./.	0/0:28,0:28:40.55:0,41,873	1/1:10,8:18:2.96:19,3,0	1/1:23,0:21:16.22:313,16,0	0/0:49,0:43:74.90:0,75,922	0/0:20,0:20:38.37:0,38,861	0/0:19,0:18:27.03:0,27,427	0/0:14,0:13:12.47:0,12,143	1/1:15,0:14:2.93:19,3,0	0/0:13,0:13:24.55:0,25,618	0/0:15,0:13:4.21:0,4,10	0/1:22,0:21:20.80:423,0,21	0/0:20,0:17:6.48:0,6,57	1/1:19,0:15:12.01:113,12,0	0/1:13,0:13:91.10:91,0,270	1/1:17,0:14:8.45:105,8,0	1/1:19,0:17:5.93:50,6,0	1/1:12,0:10:24.07:361,24,0	0/1:22,0:22:4.69:9,0,5	0/0:23,0:21:26.68:0,27,492	0/0:38,0:37:76.78:0,77,1784	1/1:10,0:10:11.17:167,11,0	1/1:22,0:20:32.74:509,33,0	1/1:19,0:15:27.07:382,27,0	0/0:12,0:12:1.25:0,1,3
chr10	65299303	.	CTTTCTT	C	4479.19	PASS	AB=0.822;AC=30;AF=0.577;AN=52;BaseQRankSum=-3.316;DP=510;FS=0.445;HRun=0;HaplotypeScore=126.6125;InbreedingCoeff=0.4924;MQ=48.80;MQ0=22;MQRankSum=4.503;QD=14.50;ReadPosRankSum=-0.283;VQSLOD=3.8521;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:26:20.49:563,20,0	0/1:4,0:5:7.83:69,0,8	./.	./.	0/0:27,0:27:46.97:0,47,910	0/1:18,0:18:11.35:11,0,36	0/1:23,0:21:67.33:315,0,67	0/0:49,0:43:73.52:0,74,956	0/0:20,0:20:35.15:0,35,861	0/0:18,0:17:15.21:0,15,342	0/0:14,0:13:19.51:0,20,210	0/1:3,0:14:1.47:51,0,1	0/0:11,0:11:30.56:0,31,636	1/1:3,0:12:11.94:157,12,0	1/1:16,0:21:16.71:541,17,0	1/1:4,0:17:5.14:49,5,0	0/1:3,14:16:4.71:277,0,5	0/1:14,0:14:66.19:66,0,284	1/1:10,8:15:17.89:215,18,0	1/1:3,15:17:0.87:152,1,0	1/1:12,0:10:24.05:356,24,0	1/1:2,19:21:11.60:207,12,0	0/0:22,0:20:34.10:0,34,613	0/0:37,0:36:85.81:0,86,1815	1/1:10,0:10:17.15:209,17,0	1/1:5,15:19:23.78:611,24,0	1/1:19,0:16:9.40:588,9,0	1/1:1,0:11:3.01:42,3,0
chr10	65299542	.	G	GTT	1952.05	PASS	AB=0.950;AC=7;AF=0.125;AN=56;BaseQRankSum=12.364;DP=668;FS=7.253;HRun=6;HaplotypeScore=96.9014;InbreedingCoeff=0.8467;MQ=63.29;MQ0=5;MQRankSum=-8.580;QD=20.77;ReadPosRankSum=-5.135;VQSLOD=0.5498;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:72.22:0,72,870	0/0:14,0:14:39.09:0,39,452	0/0:19,0:15:5.61:0,6,262	0/1:17,1:13:3.68:4,0,193	0/0:35,0:35:96.18:0,96,1137	0/0:22,0:22:60.15:0,60,704	0/0:21,0:21:55.95:0,56,637	1/1:31,2:31:65.62:839,66,0	0/0:16,0:16:45.13:0,45,537	1/1:17,4:20:52.62:606,53,0	1/1:15,6:20:48.14:647,48,0	0/0:24,0:24:72.19:0,72,862	0/0:27,0:27:78.24:0,78,948	0/0:26,0:26:66.20:0,66,805	0/0:24,0:24:66.18:0,66,780	0/0:24,0:24:69.22:0,69,838	0/0:26,0:27:49.61:0,50,838	0/0:23,0:23:60.13:0,60,711	0/0:20,0:18:42.12:0,42,511	0/0:18,0:18:48.15:0,48,585	0/0:21,0:21:60.19:0,60,730	0/0:23,0:23:69.22:0,69,839	0/0:29,0:29:84.26:0,84,1024	0/0:28,0:28:78.20:0,78,918	0/0:22,0:21:57.17:0,57,695	0/0:30,1:31:42.63:0,43,1011	0/0:44,0:44:99:0,126,1519	0/0:9,0:9:18.05:0,18,219
chr10	65299546	.	TTTG	T	1737.24	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=11.573;DP=668;FS=7.003;HRun=0;HaplotypeScore=107.1187;InbreedingCoeff=0.9820;MQ=62.52;MQ0=5;MQRankSum=-8.271;QD=24.47;ReadPosRankSum=-4.141;VQSLOD=1.7750;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:78.24:0,78,1516	0/0:14,0:14:42.11:0,42,732	0/0:22,0:15:16.30:0,16,559	0/0:19,0:13:12.01:0,12,425	0/0:36,0:36:99:0,105,2044	0/0:22,0:22:66.17:0,66,1164	0/0:21,0:21:60.18:0,60,1066	1/1:13,15:26:44.03:687,44,0	0/0:17,0:17:48.15:0,48,842	1/1:12,9:20:47.74:575,48,0	1/1:9,13:21:48.61:619,49,0	0/0:26,0:26:78.27:0,78,1658	0/0:29,0:29:84.27:0,84,1690	0/0:24,0:24:69.23:0,69,1368	0/0:24,0:24:69.20:0,69,1357	0/0:24,0:24:72.22:0,72,1313	0/0:27,0:27:81.27:0,81,1546	0/0:23,0:23:66.15:0,66,1198	0/0:18,0:16:45.15:0,45,756	0/0:17,0:17:51.17:0,51,1031	0/0:21,0:21:63.21:0,63,1266	0/0:23,0:23:69.23:0,69,1423	0/0:28,0:28:84.29:0,84,1767	0/0:28,0:28:75.23:0,75,1518	0/0:22,0:21:66.21:0,66,1333	0/0:33,0:33:69.17:0,69,1765	0/0:45,0:45:99:0,129,2614	0/0:7,0:7:18.06:0,18,333
chr10	65299553	.	TG	T	651.35	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=11.642;DP=680;FS=4.235;HRun=1;HaplotypeScore=86.6202;InbreedingCoeff=0.9936;MQ=61.76;MQ0=5;MQRankSum=-9.280;QD=9.05;ReadPosRankSum=-4.161;VQSLOD=-0.3105;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:87.12:0,87,1187	0/0:13,0:13:39.09:0,39,529	0/0:23,0:16:37.29:0,37,464	0/0:20,0:13:32.32:0,32,414	0/0:37,0:37:99:0,111,1570	0/0:22,0:22:66.13:0,66,882	0/0:20,0:20:60.14:0,60,798	1/1:30,0:28:26.03:200,26,0	0/0:17,0:17:48.08:0,48,620	1/1:16,4:19:34.58:246,35,0	1/1:18,4:21:42.23:348,42,0	0/0:26,0:26:78.26:0,78,1141	0/0:28,0:28:84.26:0,84,1185	0/0:23,0:23:69.22:0,69,988	0/0:26,0:26:78.20:0,78,1076	0/0:24,0:24:72.21:0,72,1014	0/0:30,0:30:87.24:0,87,1219	0/0:22,0:22:63.20:0,63,899	0/0:20,0:18:54.10:0,54,676	0/0:19,0:19:57.16:0,57,793	0/0:22,0:22:66.19:0,66,921	0/0:23,0:23:69.22:0,69,987	0/0:30,0:30:90.26:0,90,1273	0/0:25,0:25:72.13:0,72,1004	0/0:24,0:23:72.22:0,72,1016	0/0:34,0:34:73.37:0,73,1347	0/0:44,0:44:99:0,129,1846	0/0:5,0:5:15.02:0,15,196
chr10	65299561	.	T	TG	871.66	PASS	AB=0.739;AC=3;AF=0.054;AN=56;BaseQRankSum=8.528;DP=691;FS=0.000;HRun=0;HaplotypeScore=89.1931;InbreedingCoeff=-0.0578;MQ=63.25;MQ0=5;MQRankSum=-6.500;QD=11.32;ReadPosRankSum=-2.330;VQSLOD=3.5030;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:90.24:0,90,1217	0/0:11,0:11:33.10:0,33,446	0/0:23,0:17:45.08:0,45,577	0/0:20,0:13:39.10:0,39,505	0/0:37,0:37:99:0,111,1512	0/0:19,0:19:57.19:0,57,797	0/0:18,0:18:54.16:0,54,725	0/1:22,13:33:99:500,0,216	0/0:17,0:17:48.14:0,48,640	0/1:12,10:21:58.76:343,0,59	0/1:15,5:19:99:130,0,102	0/0:27,0:27:81.26:0,81,1116	0/0:33,0:33:99:0,99,1349	0/0:21,0:21:63.21:0,63,881	0/0:26,0:26:75.25:0,75,1049	0/0:24,0:24:72.20:0,72,957	0/0:32,0:32:96.24:0,96,1263	0/0:20,0:20:60.20:0,60,836	0/0:18,0:16:48.14:0,48,650	0/0:18,0:18:54.17:0,54,738	0/0:23,0:23:69.20:0,69,929	0/0:26,0:26:75.25:0,75,1047	0/0:32,0:32:93.31:0,93,1300	0/0:28,0:28:78.26:0,78,1088	0/0:25,0:24:75.25:0,75,1049	0/0:33,1:34:66.04:0,66,1276	0/0:45,0:45:99:0,129,1769	0/0:4,0:4:12.04:0,12,168
chr10	65299566	.	T	TG	1270.41	PASS	AB=0.800;AC=5;AF=0.089;AN=56;BaseQRankSum=7.236;DP=684;FS=2.083;HRun=0;HaplotypeScore=87.0243;InbreedingCoeff=0.7205;MQ=65.57;MQ0=5;MQRankSum=-6.692;QD=18.68;ReadPosRankSum=-2.230;VQSLOD=4.5199;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:96.24:0,96,1267	0/0:9,0:9:27.09:0,27,377	0/0:22,0:17:45.08:0,45,561	0/0:22,0:15:45.11:0,45,576	0/0:39,0:39:99:0,117,1546	0/0:22,0:22:66.20:0,66,891	0/0:18,0:18:54.15:0,54,705	1/1:17,15:31:45.23:849,45,0	0/0:16,0:16:45.13:0,45,597	1/1:9,9:18:6.46:384,6,0	0/1:12,2:15:30.49:159,0,30	0/0:26,0:26:78.24:0,78,1060	0/0:32,0:32:93.20:0,93,1224	0/0:21,0:21:63.20:0,63,851	0/0:26,0:26:78.24:0,78,1059	0/0:22,0:22:66.19:0,66,873	0/0:29,0:29:87.27:0,87,1196	0/0:22,0:22:66.18:0,66,884	0/0:19,0:17:48.15:0,48,655	0/0:18,0:18:54.17:0,54,738	0/0:23,0:23:69.23:0,69,964	0/0:26,0:26:78.25:0,78,1074	0/0:32,0:32:96.32:0,96,1341	0/0:27,0:27:78.22:0,78,1054	0/0:26,0:25:75.24:0,75,1017	0/0:35,0:36:68.32:0,68,1337	0/0:46,0:46:99:0,135,1794	0/0:4,0:4:12.04:0,12,168
chr10	65300615	.	CCACACACA	C	1847.53	PASS	AB=1.000;AC=29;AF=0.630;AN=46;BaseQRankSum=1.714;DP=712;FS=8.551;HRun=0;HaplotypeScore=171.1466;InbreedingCoeff=0.5752;MQ=50.11;MQ0=38;MQRankSum=-2.185;QD=5.12;ReadPosRankSum=-2.909;VQSLOD=1.2720;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:35,0:34:11.94:188,12,0	1/1:8,0:7:4.83:80,5,0	./.	./.	0/0:18,0:18:8.33:0,8,176	1/1:11,0:12:2.99:23,3,0	1/1:39,0:39:14.97:229,15,0	0/0:30,0:26:3:0,3,27	0/0:19,0:18:12.04:0,12,423	0/0:25,0:24:15.01:0,15,190	./.	1/1:28,1:29:8.94:111,9,0	0/0:21,0:21:27.09:0,27,816	1/1:22,1:22:18.02:242,18,0	0/0:21,0:20:0:0,0,0	1/1:14,3:16:12.04:245,12,0	1/1:24,2:25:8.34:158,8,0	1/1:18,7:25:9.03:221,9,0	1/1:14,0:17:8.53:129,9,0	./.	0/1:68,0:64:61.54:83,0,62	./.	0/0:8,0:5:3:0,3,25	0/0:54,0:56:75.24:0,75,2217	1/1:14,4:15:5.98:76,6,0	1/1:20,0:19:1.28:19,1,0	1/1:12,0:12:3.01:72,3,0	1/1:11,0:12:6.02:130,6,0
chr10	65301105	.	ACTGGCTGG	A	404.85	PASS	AC=4;AF=0.077;AN=52;BaseQRankSum=5.377;DP=418;FS=2.566;HRun=0;HaplotypeScore=99.0894;InbreedingCoeff=0.7243;MQ=56.54;MQ0=20;MQRankSum=-4.616;QD=17.60;ReadPosRankSum=-0.309;VQSLOD=2.5605;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:20:0,20,315	0/0:12,0:10:23.76:0,24,424	0/0:17,0:10:26.97:0,27,407	0/0:13,0:7:20.81:0,21,363	./.	0/0:13,0:9:17.98:0,18,346	0/0:34,0:32:66.16:0,66,1478	1/1:7,10:13:30.10:471,30,0	0/0:11,0:11:21.01:0,21,350	1/1:6,0:5:3.01:41,3,0	./.	0/0:19,0:17:30.06:0,30,683	0/0:8,0:7:12.46:0,12,302	0/0:29,0:24:46.34:0,46,1174	0/0:17,0:14:21.05:0,21,564	0/0:9,0:7:17.98:0,18,262	0/0:32,0:27:35.44:0,35,1445	0/0:15,0:13:36.10:0,36,879	0/0:9,0:6:15.04:0,15,295	0/0:4,0:4:6.02:0,6,104	0/0:40,0:33:49.54:0,50,728	0/0:7,0:5:12.03:0,12,183	0/0:4,0:3:3.01:0,3,74	0/0:45,0:40:78.21:0,78,2246	0/0:10,0:10:18.05:0,18,313	0/0:12,0:12:33.04:0,33,648	0/0:15,0:13:33.57:0,34,789	0/0:8,0:8:16.29:0,16,340
chr10	65301149	.	ATCTCAGTACTCAGAAAGCTGAC	A	520.57	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=3.752;DP=423;FS=1.849;HRun=0;HaplotypeScore=230.8114;InbreedingCoeff=0.8168;MQ=75.25;MQ0=0;MQRankSum=-3.716;QD=40.04;ReadPosRankSum=-0.339;VQSLOD=2.8751;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:45.15:0,45,4298	0/0:10,0:10:27.09:0,27,2735	0/0:28,0:28:75.67:0,76,4394	0/0:20,0:20:60.21:0,60,4069	0/0:5,0:5:15.05:0,15,1344	0/0:12,0:12:30.10:0,30,2574	0/0:32,0:32:90.29:0,90,8696	1/1:5,1:6:3.01:183,3,0	0/0:15,0:15:42.14:0,42,3970	1/1:0,4:4:9.03:431,9,0	1/1:0,3:3:2.97:20,3,0	0/0:20,0:20:60.21:0,60,6058	0/0:6,0:6:18.06:0,18,1765	0/0:25,0:25:69:0,69,6744	0/0:14,0:14:36.12:0,36,3746	0/0:9,0:9:27.09:0,27,2833	0/0:23,0:23:63.22:0,63,5827	0/0:26,0:26:75.26:0,75,7356	0/0:14,0:14:35.96:0,36,2519	0/0:9,0:9:27.09:0,27,2586	0/0:20,0:20:54.19:0,54,5056	0/0:13,0:13:39.13:0,39,3740	0/0:6,0:6:15.05:0,15,1557	0/0:37,0:37:99:0,102,9605	0/0:20,0:20:57.20:0,57,5739	0/0:8,0:8:24.08:0,24,2503	0/0:14,0:13:39.13:0,39,3823	0/0:8,0:8:18.06:0,18,1843
chr10	65301545	.	CT	C	1798.79	PASS	AB=0.962;AC=8;AF=0.143;AN=56;BaseQRankSum=11.716;DP=701;FS=1.106;HRun=2;HaplotypeScore=77.5466;InbreedingCoeff=0.7738;MQ=68.10;MQ0=0;MQRankSum=0.106;QD=23.67;ReadPosRankSum=-1.835;VQSLOD=3.0846;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,144,2122	0/0:7,0:7:21.07:0,21,315	0/1:8,0:8:2.23:2,0,165	0/0:7,0:7:14.54:0,15,185	0/0:24,0:24:69.18:0,69,952	0/0:17,0:17:48.15:0,48,696	0/0:45,0:45:99:0,132,1952	1/1:1,17:18:45.11:551,45,0	0/0:18,0:18:54.17:0,54,776	1/1:0,27:27:78.24:998,78,0	1/1:0,11:11:30.10:389,30,0	0/0:40,0:40:99:0,117,1667	0/0:28,0:28:84.24:0,84,1231	0/0:24,0:24:72.24:0,72,1069	0/0:25,0:25:75.24:0,75,1104	0/0:24,0:24:72.23:0,72,1057	0/0:45,0:45:99:0,123,1818	0/0:46,0:45:99:0,132,1949	0/0:11,0:11:33.11:0,33,495	0/0:14,0:14:39.12:0,39,559	0/0:45,0:45:99:0,126,1822	0/0:19,0:19:51.17:0,51,761	0/0:19,0:19:48.12:0,48,694	0/0:47,0:47:99:0,141,2052	0/0:36,0:36:99:0,105,1546	0/1:11,1:12:5.85:6,0,417	0/0:19,0:18:57.18:0,57,834	0/0:15,0:15:45.12:0,45,632
chr10	65302456	.	T	TAGA	4512.14	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=11.034;DP=690;FS=0.000;HRun=0;HaplotypeScore=98.0787;InbreedingCoeff=0.9957;MQ=71.05;MQ0=0;MQRankSum=-8.083;QD=64.46;ReadPosRankSum=1.779;VQSLOD=6.5501;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:42:99:0,126,2300	0/0:7,0:7:18.05:0,18,305	0/0:25,0:23:69.24:0,69,1264	0/0:12,0:10:21.07:0,21,375	0/0:36,0:36:99:0,102,1896	0/0:17,0:17:48.14:0,48,833	0/0:33,0:33:99:0,99,1829	1/1:2,21:23:63.21:1454,63,0	0/0:27,0:27:81.27:0,81,1476	1/1:1,22:23:66.23:1563,66,0	1/1:0,23:24:63.22:1496,63,0	0/0:22,0:22:66.21:0,66,1193	0/0:29,0:29:87.27:0,87,1560	0/0:24,0:24:72.25:0,72,1337	0/0:31,0:31:87.29:0,87,1582	0/0:24,0:24:72.25:0,72,1337	0/0:26,0:26:78.27:0,78,1454	0/0:21,0:21:63.22:0,63,1166	0/0:22,0:22:66.23:0,66,1230	0/0:16,0:16:44.89:0,45,838	0/0:51,0:51:99:0,151,2760	0/0:23,0:23:63.21:0,63,1142	0/0:19,0:19:54.17:0,54,976	0/0:22,0:22:66.23:0,66,1229	0/0:17,0:17:51.17:0,51,951	0/0:34,0:34:99:0,99,1842	0/0:26,0:26:78.27:0,78,1455	0/0:13,0:13:39.13:0,39,727
chr10	65302603	.	A	AT	471.93	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.148;DP=671;FS=3.932;HRun=9;HaplotypeScore=83.3490;InbreedingCoeff=0.9778;MQ=77.98;MQ0=0;MQRankSum=-0.488;QD=17.48;ReadPosRankSum=-4.136;VQSLOD=2.8197;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:97.52:0,98,1055	0/0:13,0:13:38.99:0,39,339	0/0:30,0:29:24.36:0,24,349	0/0:20,0:18:32.89:0,33,279	0/0:30,0:30:74.96:0,75,651	0/0:17,0:17:14.90:0,15,351	0/0:27,0:27:77.98:0,78,677	1/1:9,17:27:53.96:567,54,0	0/0:17,0:17:38.96:0,39,334	0/0:34,0:34:89.86:0,90,757	0/0:20,0:20:46.22:0,46,395	0/0:22,0:22:56.96:0,57,491	0/0:26,0:26:71.95:0,72,618	0/0:20,0:20:53.96:0,54,462	0/0:23,0:23:65.99:0,66,573	0/0:19,0:19:50.96:0,51,435	0/0:29,0:29:79.93:0,80,663	0/0:23,0:24:58.98:0,59,496	0/0:24,0:24:59.98:0,60,521	0/0:26,1:27:41.89:0,42,588	0/0:20,0:22:52.05:0,52,429	0/0:23,0:23:62.96:0,63,541	0/0:23,0:23:59.98:0,60,521	0/0:20,0:20:50.98:0,51,443	0/0:31,0:31:74.95:0,75,649	0/0:26,0:26:68.97:0,69,596	0/0:23,0:23:53.96:0,54,465	0/0:8,0:8:20.99:0,21,182
chr10	65304433	.	T	TA	2587.02	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=7.817;DP=730;FS=0.000;HRun=2;HaplotypeScore=74.3161;InbreedingCoeff=0.9941;MQ=86.66;MQ0=0;MQRankSum=-2.060;QD=36.96;ReadPosRankSum=-3.826;VQSLOD=2.5491;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:72,0:72:99:0,205,2499	0/0:11,0:11:33.10:0,33,402	0/0:25,0:25:75.23:0,75,924	0/0:24,0:24:58.42:0,58,673	0/0:29,0:29:87.24:0,87,1051	0/0:21,0:21:63.20:0,63,781	0/0:28,0:28:84.25:0,84,1029	1/1:2,32:34:96.31:1365,96,0	0/0:25,0:25:72.23:0,72,892	1/1:3,27:30:78.25:1105,78,0	1/1:0,6:6:18.06:259,18,0	0/0:36,0:36:99:0,102,1252	0/0:24,0:24:63.20:0,63,781	0/0:33,0:33:96.30:0,96,1190	0/0:28,0:28:81.25:0,81,1004	0/0:27,0:27:78.23:0,78,955	0/0:34,0:34:99:0,99,1199	0/0:19,0:19:57.16:0,57,693	0/0:23,0:23:69.22:0,69,855	0/0:27,0:27:81.24:0,81,991	0/0:30,0:30:81.20:0,81,973	0/0:15,0:15:45.13:0,45,545	0/0:16,0:16:42.13:0,42,521	0/0:22,0:22:66.17:0,66,801	0/0:16,0:16:42.13:0,42,521	0/0:31,1:32:50.07:0,50,1062	0/0:37,0:37:99:0,102,1265	0/0:6,0:6:18.06:0,18,220
chr10	65305399	.	G	GA	688.30	PASS	AB=0.993;AC=7;AF=0.125;AN=56;BaseQRankSum=-2.479;DP=551;FS=3.666;HRun=9;HaplotypeScore=92.0835;InbreedingCoeff=0.5128;MQ=82.49;MQ0=3;MQRankSum=0.188;QD=5.55;ReadPosRankSum=-4.899;VQSLOD=0.5791;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:61.33:0,61,478	0/0:6,0:6:12.11:0,12,81	0/1:47,1:32:11.04:11,0,199	0/1:22,0:12:16.57:17,0,46	0/0:19,0:19:47.94:0,48,405	0/0:23,0:23:47.01:0,47,384	0/0:18,0:18:39.43:0,39,323	0/1:19,0:19:60.03:74,0,60	0/0:17,0:17:35.94:0,36,301	1/1:2,11:14:33.01:342,33,0	1/1:2,19:21:36.07:387,36,0	0/0:11,0:11:28.97:0,29,223	0/0:14,0:14:32.93:0,33,275	0/0:25,0:25:38.99:0,39,408	0/0:16,0:16:34.84:0,35,273	0/0:16,0:17:39.69:0,40,295	0/0:20,0:20:51.45:0,51,439	0/0:21,0:21:56.57:0,57,473	0/0:15,0:16:37.78:0,38,294	0/0:16,0:16:28.37:0,28,215	0/0:18,0:18:23.84:0,24,202	0/0:28,0:28:60.81:0,61,528	0/0:17,0:17:35.98:0,36,312	0/0:21,0:21:59.94:0,60,511	0/0:18,0:18:37.88:0,38,298	0/0:23,0:23:40.84:0,41,359	0/0:25,0:25:67.51:0,68,531	0/0:14,0:15:30.99:0,31,329
chr10	65306398	.	GGTAGGTAGGTAGGTAGGTAA	G	1897.88	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=8.338;DP=806;FS=0.594;HRun=0;HaplotypeScore=372.5566;InbreedingCoeff=0.8031;MQ=61.02;MQ0=13;MQRankSum=-1.210;QD=15.56;ReadPosRankSum=-3.648;VQSLOD=0.1726;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:51.07:0,51,2798	0/0:18,0:17:17.01:0,17,1540	0/0:33,0:15:5.88:0,6,51	0/1:42,0:26:6.82:7,0,295	0/0:27,0:25:50.04:0,50,1792	0/0:23,0:23:33.06:0,33,1214	0/0:33,0:33:48.13:0,48,2114	1/1:18,0:16:20.93:199,21,0	0/0:39,0:39:99:0,99,6429	1/1:9,36:44:76.56:1686,77,0	1/1:5,12:17:11.88:148,12,0	0/0:42,0:42:63.65:0,64,4028	0/0:35,0:35:87.23:0,87,5129	0/0:29,0:29:44.95:0,45,3429	0/0:35,0:35:45.14:0,45,3270	0/0:38,0:38:63:0,63,4125	0/0:25,0:25:33.10:0,33,2234	0/0:20,0:20:18.06:0,18,1126	0/0:15,0:14:24.01:0,24,1353	0/0:19,0:19:50.95:0,51,2936	0/0:55,0:54:72.21:0,72,4526	0/0:25,0:25:17.81:0,18,1955	0/0:17,0:17:33.08:0,33,2180	0/0:21,0:21:48.11:0,48,2914	0/0:19,0:19:39.12:0,39,2899	0/0:33,0:33:68.52:0,69,3809	0/0:27,0:27:39.59:0,40,2876	0/0:10,0:10:12.04:0,12,1035
chr10	65306418	.	A	AGTAG	13223.48	PASS	AB=0.814;AC=42;AF=0.750;AN=56;BaseQRankSum=-7.987;DP=756;FS=2.434;HRun=0;HaplotypeScore=113.9127;InbreedingCoeff=0.7800;MQ=63.31;MQ0=9;MQRankSum=1.224;QD=21.89;ReadPosRankSum=5.181;VQSLOD=4.7135;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,23:35:21.07:518,21,0	1/1:4,15:18:15.05:335,15,0	0/0:26,0:19:51.03:0,51,726	0/0:24,0:16:37.84:0,38,509	0/1:23,0:21:35.69:36,0,379	1/1:7,15:24:9.03:224,9,0	0/1:15,20:37:38.67:69,0,39	1/1:22,0:20:45.15:804,45,0	0/0:38,0:38:96.30:0,96,1512	1/1:38,0:37:22.42:626,22,0	1/1:13,0:13:12.04:149,12,0	1/1:6,28:34:45.05:1112,45,0	0/0:35,0:35:84.15:0,84,1240	1/1:8,20:29:33.11:779,33,0	1/1:5,26:31:27.09:672,27,0	1/1:10,28:38:32.70:820,33,0	1/1:6,17:23:21.54:524,22,0	1/1:3,16:20:12.04:299,12,0	1/1:6,14:17:45.15:840,45,0	1/1:5,15:21:45.15:865,45,0	1/1:9,46:56:42.14:1045,42,0	1/1:7,20:29:36.06:578,36,0	0/0:11,0:11:24.07:0,24,371	0/0:18,0:18:45.14:0,45,707	1/1:3,21:25:30.10:741,30,0	1/1:6,21:27:60.08:1073,60,0	1/1:2,25:28:32.97:817,33,0	1/1:0,10:11:12.04:299,12,0
chr10	65306621	.	TC	T	3992.50	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=11.913;DP=879;FS=4.530;HRun=2;HaplotypeScore=92.2006;InbreedingCoeff=0.9403;MQ=79.27;MQ0=0;MQRankSum=-3.715;QD=34.12;ReadPosRankSum=-1.869;VQSLOD=3.0152;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:59,0:59:99:0,163,2405	0/0:10,0:10:30.07:0,30,425	0/0:33,0:33:93.15:0,93,1239	0/0:45,0:42:76.12:0,76,1382	0/0:18,0:18:54.18:0,54,809	0/0:28,0:28:81.25:0,81,1164	0/0:36,0:36:99:0,108,1597	1/1:0,32:31:81.13:950,81,0	0/0:26,0:26:75.25:0,75,1121	1/1:1,60:60:99:2149,169,0	1/1:1,23:24:69.22:894,69,0	0/0:46,0:46:99:0,135,2001	0/0:27,0:27:81.27:0,81,1208	0/0:25,0:25:72.24:0,72,1052	0/0:25,0:25:69.20:0,69,966	0/0:27,0:27:81.27:0,81,1213	0/0:27,0:27:81.27:0,81,1213	0/0:31,0:31:87.23:0,87,1254	0/0:20,0:20:57.14:0,57,810	0/0:24,0:24:72.21:0,72,1018	0/0:70,0:70:99:0,208,3024	0/0:39,0:39:99:0,108,1594	0/0:18,0:18:54.17:0,54,783	0/0:42,0:42:99:0,123,1822	0/0:32,0:32:96.30:0,96,1397	0/0:43,0:43:99:0,129,1864	0/0:10,0:10:30.08:0,30,428	0/0:1,0:1:3.01:0,3,45
chr10	65306720	.	A	AG	1085.71	PASS	AB=0.794;AC=4;AF=0.071;AN=56;BaseQRankSum=8.027;DP=1105;FS=11.214;HRun=0;HaplotypeScore=163.3086;InbreedingCoeff=0.0938;MQ=66.24;MQ0=17;MQRankSum=-7.146;QD=6.07;ReadPosRankSum=-0.991;VQSLOD=2.6018;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,120,1661	0/0:9,0:9:24.05:0,24,315	0/0:57,0:24:59.40:0,59,697	0/1:69,1:27:23.01:23,0,470	0/0:17,0:17:42.14:0,42,586	0/0:25,0:25:72.22:0,72,989	0/0:35,0:34:96.32:0,96,1341	0/1:26,13:37:99:390,0,716	0/0:33,0:33:93.01:0,93,1278	0/1:37,21:57:99:772,0,870	0/1:5,4:8:0.42:0,0,1	0/0:50,0:50:99:0,129,1784	0/0:41,0:41:99:0,117,1608	0/0:47,0:46:99:0,123,1701	0/0:31,0:31:65.81:0,66,904	0/0:30,0:30:81.09:0,81,1115	0/0:38,0:38:99:0,105,1466	0/0:40,0:39:99:0,111,1551	0/0:19,0:15:42.14:0,42,586	0/0:12,0:12:33.08:0,33,440	0/0:174,0:169:99:0,456,6225	0/0:25,0:25:62.77:0,63,829	0/0:21,0:21:53.58:0,54,755	0/0:83,0:82:99:0,219,3063	0/0:20,0:20:48.16:0,48,671	0/0:46,0:46:99:0,131,1844	0/0:13,1:13:30.57:0,31,417	0/0:15,0:12:27.09:0,27,377
chr10	65306724	.	AG	A	2926.05	PASS	AB=0.574;AC=4;AF=0.071;AN=56;BaseQRankSum=12.361;DP=1085;FS=4.568;HRun=1;HaplotypeScore=155.6381;InbreedingCoeff=0.6305;MQ=66.06;MQ0=16;MQRankSum=-11.719;QD=27.60;ReadPosRankSum=-0.602;VQSLOD=3.1925;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,123,1961	0/0:9,0:9:24.08:0,24,383	0/0:53,0:24:44.61:0,45,787	0/0:71,0:30:63.36:0,63,780	0/0:17,0:17:42.10:0,42,600	0/0:24,0:24:66.22:0,66,1054	0/0:37,0:36:99:0,99,1570	1/1:3,37:37:99:1343,102,0	0/0:30,0:30:81.11:0,81,1293	0/1:10,47:55:99:1689,0,128	0/1:3,6:8:0.41:0,0,1	0/0:50,0:50:99:0,138,2158	0/0:41,0:41:99:0,114,1793	0/0:46,0:45:99:0,123,1958	0/0:26,0:26:62.72:0,63,1000	0/0:30,0:30:84.12:0,84,1335	0/0:36,0:36:99:0,105,1640	0/0:39,1:39:70.99:0,71,1644	0/0:19,0:15:42.14:0,42,668	0/0:11,0:11:30.10:0,30,479	0/0:172,1:168:99:0,454,7172	0/0:23,0:23:54.64:0,55,840	0/0:21,0:21:47.55:0,48,732	0/0:87,0:86:99:0,225,3527	0/0:19,0:19:48.14:0,48,739	0/0:45,0:45:99:0,129,2040	0/0:12,0:11:24.55:0,25,381	0/0:14,0:11:27.09:0,27,426
chr10	65306826	.	AG	A	641.47	PASS	AB=0.721;AC=2;AF=0.036;AN=56;BaseQRankSum=7.643;DP=992;FS=8.216;HRun=1;HaplotypeScore=119.7640;InbreedingCoeff=-0.0416;MQ=61.32;MQ0=34;MQRankSum=-7.141;QD=10.35;ReadPosRankSum=-2.488;VQSLOD=0.2999;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:69.24:0,69,1097	0/0:11,0:10:18.90:0,19,289	0/0:57,3:27:74.78:0,75,1060	0/0:68,1:22:40.68:0,41,525	0/0:11,0:11:30.10:0,30,473	0/0:23,0:23:63:0,63,1006	0/0:55,0:54:99:0,153,2392	0/1:12,10:17:99:332,0,241	0/0:30,0:30:87.30:0,87,1387	0/1:27,13:38:99:398,0,905	0/0:6,1:7:5.55:0,6,95	0/0:47,0:45:99:0,116,1796	0/0:34,0:34:99:0,99,1575	0/0:50,0:49:99:0,138,2203	0/0:29,0:29:60.10:0,60,954	0/0:27,1:27:71.67:0,72,1193	0/0:36,0:36:96.26:0,96,1491	0/0:34,0:34:88.31:0,88,1423	0/0:16,0:13:33.11:0,33,493	0/0:11,0:11:33.11:0,33,527	0/0:187,0:179:99:0,474,7453	0/0:18,0:18:51.17:0,51,808	0/0:16,0:16:32.97:0,33,527	0/0:63,0:60:99:0,147,2347	0/0:13,0:12:30.10:0,30,479	0/0:26,0:25:69.18:0,69,1099	0/0:12,0:12:33.11:0,33,514	0/0:14,0:13:36.12:0,36,575
chr10	65306888	.	CCACAGCACA	C	936.88	PASS	AB=0.983;AC=8;AF=0.143;AN=56;BaseQRankSum=-2.174;DP=903;FS=1.781;HRun=0;HaplotypeScore=241.7881;InbreedingCoeff=0.5886;MQ=58.25;MQ0=13;MQRankSum=-1.513;QD=6.89;ReadPosRankSum=0.119;VQSLOD=2.2206;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:66.23:0,66,2377	0/0:7,0:7:9.03:0,9,261	0/0:30,0:9:8.35:0,8,64	0/1:44,0:18:33.89:34,0,94	0/0:13,0:13:24.06:0,24,601	0/0:29,0:29:57.19:0,57,1603	0/0:40,0:38:72.23:0,72,1908	1/1:28,0:27:30.10:473,30,0	0/0:37,0:36:82.16:0,82,2477	1/1:25,1:24:27.09:526,27,0	1/1:5,3:8:2.85:19,3,0	0/0:51,0:51:99:0,102,3172	0/0:32,0:32:66.21:0,66,2203	0/0:46,0:45:75.24:0,75,2512	0/0:28,0:28:54.15:0,54,1646	0/0:25,0:24:57.19:0,57,1665	0/0:32,0:32:72.25:0,72,2353	0/0:33,0:33:78.22:0,78,2731	0/0:21,0:21:9.03:0,9,289	0/0:9,0:9:9.03:0,9,330	0/0:165,0:162:99:0,283,8860	0/0:19,0:19:27.08:0,27,890	0/0:14,0:14:29.97:0,30,747	0/0:61,0:60:99:0,114,3893	0/0:14,0:14:24.03:0,24,767	0/1:28,1:29:29.23:29,0,1216	0/0:25,0:23:54.18:0,54,1902	0/0:4,0:4:12.04:0,12,533
chr10	65306915	.	A	AG	720.59	PASS	AB=0.816;AC=3;AF=0.054;AN=56;BaseQRankSum=-0.035;DP=1042;FS=1.675;HRun=0;HaplotypeScore=124.7800;InbreedingCoeff=-0.0570;MQ=57.86;MQ0=33;MQRankSum=1.310;QD=5.59;ReadPosRankSum=-4.990;VQSLOD=2.7475;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,1:38:92.87:0,93,1300	0/0:10,0:10:22.91:0,23,321	0/0:61,1:14:27.07:0,27,245	0/1:68,1:25:51.64:52,0,346	0/0:12,0:11:33.08:0,33,426	0/0:27,0:26:66.19:0,66,923	0/0:46,1:43:99:0,114,1559	0/1:15,12:20:99:467,0,246	0/0:43,0:42:99:0,111,1516	0/1:23,8:30:99:302,0,609	0/0:14,2:15:33.10:0,33,437	0/0:45,0:45:99:0,129,1740	0/0:39,0:39:99:0,108,1453	0/0:41,0:40:99:0,108,1487	0/0:25,1:26:56.73:0,57,797	0/0:33,0:31:79.32:0,79,1165	0/0:38,0:38:99:0,111,1548	0/0:43,0:42:99:0,120,1645	0/0:16,0:10:27.08:0,27,353	0/0:8,0:8:21.07:0,21,294	0/0:168,8:165:99:0,424,5854	0/0:20,0:20:51.14:0,51,678	0/0:14,0:14:36.09:0,36,484	0/0:73,0:72:99:0,198,2767	0/0:14,0:14:36.07:0,36,465	0/0:39,0:38:99:0,114,1519	0/0:24,0:21:66.69:0,67,915	0/0:9,0:9:27.09:0,27,378
chr10	65307579	.	CA	C	2513.44	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.265;DP=626;FS=0.475;HRun=1;HaplotypeScore=61.0860;InbreedingCoeff=0.9983;MQ=81.23;MQ0=0;MQRankSum=-0.427;QD=37.51;ReadPosRankSum=-6.126;VQSLOD=1.4983;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,132,2085	0/0:10,0:10:24.08:0,24,367	0/0:13,0:13:39.08:0,39,572	0/0:19,0:19:53.86:0,54,769	0/0:14,0:14:42.10:0,42,602	0/0:24,0:24:72.23:0,72,1127	0/0:37,0:37:99:0,111,1751	1/1:0,37:37:99:1446,108,0	0/0:29,0:29:87.28:0,87,1368	1/1:0,15:15:45.11:591,45,0	1/1:0,15:15:45.15:619,45,0	0/0:21,0:21:63.21:0,63,1003	0/0:23,0:23:69.24:0,69,1097	0/0:14,0:14:39.13:0,39,624	0/0:34,0:34:99:0,102,1596	0/0:26,0:26:78.27:0,78,1247	0/0:29,0:29:87.30:0,87,1380	0/0:22,0:22:66.20:0,66,1029	0/0:29,0:29:87.28:0,87,1359	0/0:17,0:17:48.15:0,48,744	0/0:47,0:47:99:0,135,2132	0/0:16,0:16:48.16:0,48,765	0/0:11,0:11:33.11:0,33,528	0/0:28,0:28:81.23:0,81,1267	0/0:12,0:12:36.12:0,36,575	0/0:14,0:14:42.14:0,42,672	0/0:18,0:18:54.18:0,54,860	0/0:8,0:8:24.08:0,24,384
chr10	65307680	.	GAC	G	1513.64	PASS	AB=0.924;AC=9;AF=0.161;AN=56;BaseQRankSum=8.675;DP=637;FS=15.032;HRun=0;HaplotypeScore=79.2932;InbreedingCoeff=0.6266;MQ=67.18;MQ0=3;MQRankSum=1.111;QD=12.21;ReadPosRankSum=-1.400;VQSLOD=2.0209;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,114,1801	0/0:7,0:7:21.04:0,21,309	0/0:25,1:23:16.96:0,17,751	0/0:24,0:20:12.90:0,13,501	0/0:20,0:20:16.98:0,17,796	0/1:13,1:14:7.11:7,0,407	0/1:19,2:21:23.24:23,0,652	1/1:5,18:23:51.12:595,51,0	0/0:33,1:34:50.09:0,50,1340	1/1:4,20:25:63.03:758,63,0	1/1:4,12:15:24.03:280,24,0	0/0:25,1:26:32:0,32,988	0/1:23,2:25:2.12:2,0,1008	0/0:14,1:15:42.14:0,42,686	0/0:34,0:34:84.29:0,84,1376	0/0:20,0:20:51.16:0,51,812	0/0:21,1:22:29.02:0,29,996	0/0:14,0:14:33.11:0,33,541	0/0:19,1:20:13.97:0,14,744	0/0:8,0:8:24.04:0,24,364	0/0:45,2:47:74.12:0,74,1705	0/0:24,1:25:19.99:0,20,839	0/0:15,0:15:42.11:0,42,618	0/0:23,1:24:10.96:0,11,701	0/0:18,1:19:10.98:0,11,676	0/0:26,0:26:66.21:0,66,1038	0/0:31,0:31:78.25:0,78,1242	0/0:9,0:9:27.09:0,27,437
chr10	65308193	.	C	CT	729.80	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=7.798;DP=514;FS=1.516;HRun=6;HaplotypeScore=59.2867;InbreedingCoeff=0.8092;MQ=49.36;MQ0=40;MQRankSum=-5.125;QD=9.86;ReadPosRankSum=-3.221;VQSLOD=0.4534;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:30:72.16:0,72,734	0/0:12,0:12:30.07:0,30,305	0/1:23,0:7:7.10:7,0,55	0/0:22,0:5:11.96:0,12,110	0/0:19,0:19:54.11:0,54,545	0/0:20,0:19:51.11:0,51,517	0/0:19,0:19:45.10:0,45,458	1/1:9,10:15:18.26:220,18,0	0/0:14,0:13:24.05:0,24,245	1/1:6,8:11:30.07:338,30,0	1/1:4,14:14:31.70:310,32,0	0/0:19,0:16:45.10:0,45,458	0/0:8,0:8:18.04:0,18,183	0/0:16,0:14:33.06:0,33,330	0/0:17,0:17:36.07:0,36,360	0/0:7,0:5:15.03:0,15,153	0/0:31,0:29:81.15:0,81,816	0/0:27,0:27:66.11:0,66,662	0/0:25,0:18:48.11:0,48,490	0/0:25,0:25:60.13:0,60,612	0/0:16,0:11:7.16:0,7,225	0/0:13,0:13:30.07:0,30,306	0/0:10,0:10:24.05:0,24,244	0/0:27,0:27:63.12:0,63,635	0/0:13,0:12:33.07:0,33,336	0/0:26,0:24:60.08:0,60,594	0/0:18,0:16:30.07:0,30,306	0/0:4,0:4:12.03:0,12,122
chr10	65308200	.	C	CT	678.67	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=7.836;DP=534;FS=0.000;HRun=6;HaplotypeScore=61.3804;InbreedingCoeff=0.8754;MQ=52.55;MQ0=23;MQRankSum=-4.388;QD=13.05;ReadPosRankSum=-1.289;VQSLOD=2.0539;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:31:87.18:0,87,877	0/0:11,0:11:27.06:0,27,275	0/0:35,0:10:7.31:0,7,72	0/0:24,0:5:0.66:0,1,61	0/0:22,0:22:56.97:0,57,554	0/0:21,0:20:54.11:0,54,543	0/0:18,0:18:48.08:0,48,480	1/1:8,10:15:16.67:215,17,0	0/0:15,0:15:36.07:0,36,359	1/1:9,7:11:24.05:270,24,0	1/1:5,13:14:29.58:334,30,0	0/0:22,0:19:48.11:0,48,488	0/0:7,0:7:18.04:0,18,183	0/0:14,0:14:35.91:0,36,349	0/0:16,0:16:39.08:0,39,396	0/0:8,0:7:21.05:0,21,213	0/0:33,1:33:90.12:0,90,903	0/0:29,0:29:69.14:0,69,700	0/0:23,0:20:54.09:0,54,541	0/0:24,0:24:69.15:0,69,702	0/0:12,0:11:26.99:0,27,260	0/0:11,0:11:33.07:0,33,335	0/0:13,0:13:36.06:0,36,359	0/0:28,0:28:69.16:0,69,703	0/0:14,0:13:39.09:0,39,397	0/0:26,0:25:69.08:0,69,689	0/0:17,0:15:30.06:0,30,306	0/0:5,0:5:12.02:0,12,122
chr10	65308226	.	T	TC	900.88	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=2.897;DP=514;FS=18.901;HRun=4;HaplotypeScore=57.3515;InbreedingCoeff=0.8826;MQ=54.89;MQ0=17;MQRankSum=-2.988;QD=19.17;ReadPosRankSum=-2.188;VQSLOD=1.7343;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:36:75.01:0,75,845	0/0:6,0:6:18.04:0,18,196	0/0:31,0:8:8:0,8,50	0/0:19,2:3:2.03:0,2,6	0/0:17,0:17:42.03:0,42,434	0/0:15,0:15:32.08:0,32,330	0/0:13,0:10:27.07:0,27,300	1/1:7,10:15:26.93:265,27,0	0/0:15,0:14:33.06:0,33,349	1/1:3,17:17:48.01:522,48,0	1/1:1,9:9:20.98:254,21,0	0/0:23,0:22:60.06:0,60,640	0/0:14,0:14:34.62:0,35,353	0/0:18,0:18:44.83:0,45,462	0/0:15,0:15:36.10:0,36,399	0/0:13,0:13:30.04:0,30,325	0/0:29,1:29:69.04:0,69,736	0/0:27,0:27:66.12:0,66,712	0/0:22,0:20:48.04:0,48,506	0/0:17,0:17:42.05:0,42,441	0/0:12,0:11:21.03:0,21,218	0/0:13,0:13:32.62:0,33,325	0/0:15,0:15:30.42:0,30,364	0/0:32,0:32:84.11:0,84,902	0/0:18,0:18:42.91:0,43,420	0/0:20,0:19:44.64:0,45,447	0/0:19,0:19:38.69:0,39,371	0/0:2,0:2:5.98:0,6,55
chr10	65308830	.	GT	G	3037.66	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=12.534;DP=611;FS=8.417;HRun=2;HaplotypeScore=60.9227;InbreedingCoeff=0.9996;MQ=81.79;MQ0=0;MQRankSum=-1.400;QD=35.74;ReadPosRankSum=-1.614;VQSLOD=3.0683;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:78.26:0,78,1164	0/0:19,0:19:57.19:0,57,854	0/0:21,0:21:57.16:0,57,830	0/0:11,0:11:30.07:0,30,384	0/0:26,0:26:78.26:0,78,1168	0/0:31,0:31:93.31:0,93,1387	0/0:29,0:29:87.29:0,87,1297	1/1:0,30:30:90.26:1137,90,0	0/0:27,0:27:78.25:0,78,1142	1/1:1,32:33:99:1265,99,0	1/1:0,22:22:60.20:779,60,0	0/0:11,0:11:33.11:0,33,495	0/0:16,0:16:39.13:0,39,582	0/0:15,0:15:45.14:0,45,646	0/0:25,0:25:75.24:0,75,1103	0/0:22,0:22:66.20:0,66,961	0/0:20,0:20:60.20:0,60,890	0/0:20,0:20:57.15:0,57,810	0/0:18,0:18:48.14:0,48,697	0/0:18,0:18:54.17:0,54,790	0/0:27,0:27:78.25:0,78,1143	0/0:18,0:18:54.16:0,54,770	0/0:12,0:12:36.12:0,36,539	0/0:22,0:21:66.22:0,66,989	0/0:14,0:14:42.13:0,42,608	0/0:31,0:31:90.30:0,90,1345	0/0:33,0:33:99:0,99,1408	0/0:14,0:14:42.12:0,42,603
chr10	65308933	.	TA	T	5841.18	PASS	AB=0.944;AC=43;AF=0.768;AN=56;BaseQRankSum=5.462;DP=572;FS=2.689;HRun=13;HaplotypeScore=70.9664;InbreedingCoeff=0.8721;MQ=72.05;MQ0=1;MQRankSum=-0.448;QD=12.70;ReadPosRankSum=3.338;VQSLOD=5.2544;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,34:41:50.38:524,50,0	1/1:2,3:5:8.93:66,9,0	0/0:17,0:15:7.91:0,8,188	0/1:16,1:16:0.74:1,0,126	0/0:18,2:21:19.94:0,20,333	1/1:2,18:19:50.71:372,51,0	1/1:3,15:18:32.78:241,33,0	1/1:3,0:30:55.96:165,56,0	0/0:24,0:24:48.01:0,48,447	1/1:3,0:25:46.62:136,47,0	1/1:2,0:17:27.42:79,27,0	1/1:6,13:19:26.82:197,27,0	0/0:16,0:16:30.04:0,30,288	1/1:3,15:18:41.58:306,42,0	1/1:5,20:26:23.50:327,23,0	1/1:4,14:19:43.77:312,44,0	1/1:4,23:28:64.66:465,65,0	1/1:2,20:22:44.71:326,45,0	1/1:3,12:15:35.66:253,36,0	1/1:5,21:26:62.30:447,62,0	1/1:2,16:18:44.74:328,45,0	1/1:4,9:13:20.85:153,21,0	0/0:12,1:13:7.63:0,8,220	0/0:21,0:21:48.05:0,48,456	1/1:5,13:18:3.18:189,3,0	1/1:4,25:29:47.60:511,48,0	1/1:1,18:20:23.58:327,24,0	1/1:5,10:16:16.92:115,17,0
chr10	65309581	.	GT	G	2447.71	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.570;DP=683;FS=3.510;HRun=2;HaplotypeScore=68.5623;InbreedingCoeff=0.9990;MQ=83.62;MQ0=0;MQRankSum=-0.407;QD=34.97;ReadPosRankSum=-1.706;VQSLOD=3.4552;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,135,2022	0/0:9,0:9:24.05:0,24,337	0/0:15,0:15:44.93:0,45,616	0/0:26,0:25:75.13:0,75,965	0/0:22,0:22:66.22:0,66,982	0/0:15,0:15:42.14:0,42,630	0/0:32,0:32:96.33:0,96,1439	1/1:0,28:28:84.25:1063,84,0	0/0:25,0:25:75.25:0,75,1124	1/1:2,21:23:66.18:827,66,0	1/1:0,19:19:54.18:701,54,0	0/0:31,0:31:90.29:0,90,1324	0/0:27,0:27:72.23:0,72,1057	0/0:21,0:21:60.20:0,60,899	0/0:27,0:27:81.27:0,81,1210	0/0:21,0:21:63.20:0,63,924	0/0:43,0:43:99:0,129,1931	0/0:15,0:15:45.13:0,45,652	0/0:23,0:23:69.22:0,69,1013	0/0:20,0:20:60.19:0,60,877	0/0:49,0:49:99:0,144,2137	0/0:11,0:11:33.11:0,33,495	0/0:16,0:16:48.16:0,48,718	0/0:23,0:23:66.22:0,66,987	0/0:24,0:24:72.22:0,72,1055	0/0:40,1:41:84.45:0,84,1759	0/0:21,0:21:63.21:0,63,944	0/0:11,0:11:30.10:0,30,450
chr10	65310512	.	ATCTCTCTCTC	A	2360.79	PASS	AB=1.000;AC=27;AF=0.643;AN=42;BaseQRankSum=0.389;DP=474;FS=11.311;HRun=0;HaplotypeScore=138.5418;InbreedingCoeff=0.5627;MQ=71.69;MQ0=19;MQRankSum=0.864;QD=10.93;ReadPosRankSum=2.224;VQSLOD=1.9845;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	1/1:5,1:7:9.03:210,9,0	./.	0/0:31,0:17:0.47:0,0,1	0/1:13,0:13:2.77:3,0,127	./.	1/1:23,1:22:6.01:74,6,0	0/0:28,0:28:3.27:0,3,7	0/0:19,0:18:18.06:0,18,660	0/0:28,0:26:39.13:0,39,1198	./.	1/1:19,0:19:9.03:215,9,0	0/0:15,0:15:6.47:0,6,64	1/1:13,2:14:6.02:166,6,0	1/1:27,0:29:9.03:243,9,0	1/1:2,1:3:3.01:88,3,0	1/1:18,1:17:14.68:361,15,0	1/1:12,1:11:3.01:87,3,0	1/1:19,0:19:8.71:195,9,0	1/1:9,1:10:3.01:70,3,0	./.	1/1:7,0:9:6.02:95,6,0	./.	0/0:22,0:22:6.02:0,6,150	./.	1/1:19,1:21:10.53:307,11,0	1/1:9,1:11:15.05:387,15,0	0/0:12,0:10:0.47:0,0,1
chr10	65310554	.	CTCTCTCTCTCTGTGTGTGTG	C	4230.01	PASS	AC=28;AF=0.636;AN=44;BaseQRankSum=2.716;DP=419;FS=43.766;HRun=0;HaplotypeScore=162.3137;InbreedingCoeff=0.7113;MQ=35.01;MQ0=62;MQRankSum=-1.797;QD=20.34;ReadPosRankSum=1.380;VQSLOD=2.2704;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	1/1:9,0:8:11.02:295,11,0	./.	./.	0/0:21,0:20:33.11:0,33,1104	./.	1/1:20,0:13:5.14:152,5,0	0/0:23,0:18:14.40:0,14,96	0/0:22,0:19:3.63:0,4,753	0/0:26,0:25:27.69:0,28,1556	./.	1/1:13,1:11:9.03:305,9,0	0/0:17,0:15:33.97:0,34,980	1/1:12,0:11:6.02:166,6,0	1/1:7,15:21:9.03:422,9,0	1/1:7,0:7:6.02:171,6,0	1/1:26,0:18:6.51:346,7,0	1/1:12,0:9:4.23:172,4,0	1/1:10,0:9:8.80:342,9,0	1/1:14,0:13:2.37:150,2,0	./.	1/1:13,0:10:9.03:180,9,0	0/0:11,0:10:9.03:0,9,324	0/0:27,0:21:28.45:0,28,995	0/0:11,0:9:3.01:0,3,95	1/1:20,0:19:7.21:629,7,0	1/1:19,0:17:27.05:695,27,0	1/1:10,0:5:9.03:204,9,0
chr10	65310564	.	CTGTGTGTGTG	C	1640.35	PASS	AB=0.907;AC=26;AF=0.591;AN=44;BaseQRankSum=5.244;DP=409;FS=30.569;HRun=0;HaplotypeScore=127.2801;InbreedingCoeff=0.2973;MQ=34.46;MQ0=62;MQRankSum=-5.138;QD=6.70;ReadPosRankSum=1.372;VQSLOD=0.2685;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	1/1:7,1:8:3.01:87,3,0	./.	./.	0/0:21,0:20:26.92:0,27,817	./.	1/1:14,1:8:1.18:81,1,0	0/0:23,0:18:6.02:0,6,68	0/1:20,0:19:14.45:14,0,105	0/1:22,0:24:23.97:24,0,144	0/1:14,0:11:0:0,0,0	1/1:9,1:9:3.01:82,3,0	0/0:18,0:16:30.98:0,31,827	./.	1/1:21,1:21:6.02:164,6,0	1/1:6,1:7:3.01:83,3,0	0/1:24,1:18:1.18:6,0,1	1/1:11,0:9:2.94:88,3,0	0/1:8,0:8:0.18:146,0,0	1/1:10,3:13:3.01:82,3,0	./.	1/1:8,3:9:3.01:86,3,0	0/0:13,0:12:15.05:0,15,527	0/0:27,0:20:28.45:0,28,919	0/0:8,2:9:3.01:0,3,53	1/1:16,2:18:12.03:340,12,0	1/1:13,3:15:12:309,12,0	0/1:7,3:6:92.10:189,0,92
chr10	65310610	.	CA	C	787.54	PASS	AB=1.000;AC=28;AF=0.500;AN=56;BaseQRankSum=6.792;DP=473;FS=20.900;HRun=8;HaplotypeScore=116.1432;InbreedingCoeff=0.0663;MQ=53.00;MQ0=29;MQRankSum=-0.083;QD=2.58;ReadPosRankSum=1.469;VQSLOD=-0.1537;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:15,0:14:10.72:75,0,11	1/1:8,0:8:4.15:25,4,0	0/0:44,0:16:42.07:0,42,453	0/0:27,0:11:8.07:0,8,231	0/0:17,0:17:36.51:0,37,396	0/1:16,0:16:11.94:19,0,12	0/1:17,0:13:11.66:19,0,12	0/0:13,0:13:11.76:0,12,157	1/1:2,15:17:23.84:218,24,0	1/1:19,0:19:6.60:26,7,0	1/1:15,0:15:4.15:11,4,0	0/1:18,0:17:7.86:32,0,8	0/0:16,0:15:41.62:0,42,479	1/1:11,0:11:2.79:14,3,0	0/1:17,0:17:7.95:8,0,15	1/1:11,0:10:0.30:2,0,0	0/1:21,0:18:2.49:86,0,2	0/0:11,0:11:2.98:0,3,22	1/1:19,0:18:5.02:114,5,0	0/1:15,0:15:7.26:44,0,7	1/1:11,0:10:8.65:46,9,0	0/1:13,0:12:16.18:16,0,34	0/0:16,0:16:42.06:0,42,488	0/0:24,0:20:47.83:0,48,553	0/1:15,0:15:12.81:16,0,13	0/1:21,0:20:15.93:97,0,16	0/1:9,0:9:36.19:36,0,45	0/1:16,0:13:10.16:53,0,10
chr10	65310611	.	AAAAAAAAC	A	338.75	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-1.643;DP=499;FS=9.476;HRun=0;HaplotypeScore=156.3592;InbreedingCoeff=0.8539;MQ=53.29;MQ0=28;MQRankSum=-1.208;QD=26.06;ReadPosRankSum=0.375;VQSLOD=2.9309;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:18:45.83:0,46,1078	0/0:8,0:8:14.92:0,15,356	0/0:45,0:17:30.47:0,30,918	0/0:28,0:11:24.07:0,24,684	0/0:17,0:17:25.02:0,25,925	0/0:19,0:19:13.66:0,14,252	0/0:19,0:16:40.38:0,40,998	1/1:6,7:13:21.05:431,21,0	0/0:18,0:18:31.32:0,31,304	0/0:19,0:19:32.98:0,33,360	0/0:14,0:14:34.83:0,35,531	0/0:19,0:18:16.35:0,16,280	0/0:16,0:15:39.13:0,39,1483	0/0:11,0:11:12.04:0,12,262	0/0:18,0:18:33.11:0,33,854	0/0:11,0:10:19.31:0,19,390	0/0:23,0:20:57.20:0,57,1530	0/0:12,0:12:24.47:0,24,541	0/0:21,0:20:47.28:0,47,996	0/0:16,0:16:33.14:0,33,689	0/0:11,0:10:9.01:0,9,166	0/0:14,0:13:28.97:0,29,565	0/0:16,0:16:27.09:0,27,1104	0/0:25,0:21:45.61:0,46,1649	0/0:17,0:16:23.06:0,23,477	0/0:21,0:20:34.35:0,34,658	0/0:10,0:10:18.06:0,18,512	0/0:19,0:16:36.09:0,36,848
chr10	65310617	.	AAC	A	4328.85	PASS	AB=1.000;AC=42;AF=0.750;AN=56;BaseQRankSum=6.935;DP=527;FS=30.960;HRun=0;HaplotypeScore=104.9933;InbreedingCoeff=0.7685;MQ=56.91;MQ0=15;MQRankSum=-3.093;QD=11.36;ReadPosRankSum=-4.471;VQSLOD=2.3644;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:21:35.99:281,36,0	1/1:7,0:7:12.28:51,12,0	0/0:47,0:19:51.55:0,52,535	0/0:30,0:14:19.42:0,19,339	0/0:13,0:13:33.02:0,33,476	0/1:22,0:22:3.13:42,0,3	1/1:19,0:17:27.63:252,28,0	0/1:12,0:12:90.74:91,0,127	1/1:17,0:17:37.25:247,37,0	1/1:27,0:27:77.61:665,78,0	1/1:14,0:14:35.65:258,36,0	1/1:22,1:23:20.36:139,20,0	0/0:17,0:17:30.26:0,30,597	1/1:11,1:12:11.78:75,12,0	1/1:21,0:21:29.27:165,29,0	1/1:8,2:10:17.82:137,18,0	1/1:23,0:22:29.77:238,30,0	1/1:12,0:12:8.87:108,9,0	1/1:21,0:20:50.63:343,51,0	1/1:18,0:18:38.31:217,38,0	1/1:17,0:17:8.63:46,9,0	1/1:14,1:14:20.52:199,21,0	0/0:17,0:17:35.59:0,36,542	0/0:22,0:21:57.60:0,58,716	1/1:16,0:15:21.62:107,22,0	1/1:23,0:23:53.10:317,53,0	1/1:12,1:13:1.86:151,2,0	1/1:18,0:16:24.68:200,25,0
chr10	65310618	.	AC	A	6980.12	PASS	AB=1.000;AC=43;AF=0.768;AN=56;BaseQRankSum=4.495;DP=519;FS=13.947;HRun=1;HaplotypeScore=86.4736;InbreedingCoeff=0.8638;MQ=57.53;MQ0=14;MQRankSum=-3.797;QD=18.56;ReadPosRankSum=-4.033;VQSLOD=3.1448;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,6:20:54.72:511,55,0	1/1:6,1:7:18.02:175,18,0	0/0:44,0:19:43.63:0,44,397	0/0:29,0:14:12.29:0,12,248	0/0:13,0:13:39.07:0,39,425	1/1:3,19:22:12.29:120,12,0	1/1:14,5:17:48.69:412,49,0	0/1:12,0:12:62.90:63,0,96	1/1:17,0:17:35.73:198,36,0	1/1:28,0:28:80.03:625,80,0	1/1:13,0:13:35.61:241,36,0	1/1:5,16:21:20.82:202,21,0	0/0:16,1:17:12.31:0,12,429	1/1:1,11:12:11.91:102,12,0	1/1:16,4:20:47.96:429,48,0	1/1:11,0:11:26.82:206,27,0	1/1:16,7:22:63.28:617,63,0	1/1:9,3:12:27.59:194,28,0	1/1:1,20:20:57.45:615,57,0	1/1:4,13:17:47.38:403,47,0	1/1:0,17:17:9.03:125,9,0	1/1:9,4:13:34.64:294,35,0	0/0:17,0:17:35.77:0,36,444	0/0:23,0:22:61.22:0,61,602	1/1:3,13:15:29.02:236,29,0	1/1:4,19:23:56.27:541,56,0	1/1:12,2:14:28.74:276,29,0	1/1:14,4:16:40.80:395,41,0
chr10	65310619	.	CAA	C	388.04	PASS	AB=1.000;AC=6;AF=0.107;AN=56;BaseQRankSum=4.475;DP=523;FS=26.853;HRun=8;HaplotypeScore=115.5015;InbreedingCoeff=0.2199;MQ=57.60;MQ0=14;MQRankSum=-1.994;QD=4.68;ReadPosRankSum=1.486;VQSLOD=-0.3556;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:26.52:0,27,211	0/0:7,0:7:14.66:0,15,111	0/0:42,0:18:38.87:0,39,587	0/0:29,0:14:32.77:0,33,485	0/0:13,0:13:36.12:0,36,613	0/0:22,0:22:12.55:0,13,91	0/0:19,0:17:10.98:0,11,182	0/1:12,0:12:25.67:26,0,107	1/1:8,9:17:38.20:428,38,0	0/1:30,0:30:38.65:45,0,39	0/1:13,0:13:8.57:9,0,11	0/0:22,0:22:2.82:0,3,75	0/0:17,0:17:48.06:0,48,781	0/0:13,0:13:5.96:0,6,46	0/0:20,0:20:27.70:0,28,233	0/1:11,0:11:0.86:1,0,57	0/0:23,0:22:52.09:0,52,359	0/0:13,0:13:17.25:0,17,140	0/0:21,0:20:19.55:0,20,216	0/0:17,0:17:26.21:0,26,167	0/0:17,0:17:8.82:0,9,53	0/0:15,0:15:2.04:0,2,139	0/0:17,0:17:35.97:0,36,556	0/0:21,0:20:53.21:0,53,852	0/0:16,0:15:19.96:0,20,139	0/0:23,0:23:34.34:0,34,187	0/0:14,0:14:19.71:0,20,177	0/0:18,0:16:24.08:0,24,189
chr10	65312915	.	TG	T	3943.27	PASS	AB=0.792;AC=36;AF=0.643;AN=56;BaseQRankSum=4.495;DP=254;FS=1.629;HRun=9;HaplotypeScore=34.6695;InbreedingCoeff=0.7725;MQ=72.43;MQ0=0;MQRankSum=-4.234;QD=22.40;ReadPosRankSum=1.151;VQSLOD=3.8835;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,15:20:45.02:412,45,0	1/1:2,2:4:6:55,6,0	0/0:17,0:15:27.08:0,27,306	0/1:5,0:5:8.61:16,0,9	0/0:9,0:9:24.07:0,24,277	1/1:0,8:8:24.01:220,24,0	1/1:1,7:8:18.01:165,18,0	0/0:4,0:12:17.50:0,18,90	0/0:2,0:2:6.02:0,6,69	0/0:3,0:3:9.03:0,9,104	0/0:14,0:14:39.12:0,39,450	1/1:1,11:12:33.02:302,33,0	0/0:8,0:8:24.06:0,24,268	0/1:2,5:7:13.60:144,0,14	1/1:0,6:6:18.01:165,18,0	1/1:0,11:11:33.02:302,33,0	1/1:4,9:13:27.01:247,27,0	1/1:3,9:12:30.02:274,30,0	1/1:1,2:3:6:55,6,0	1/1:0,7:7:21.01:192,21,0	1/1:3,2:5:5.99:55,6,0	1/1:1,10:11:33.01:298,33,0	0/0:8,0:8:21.06:0,21,242	0/0:5,0:5:12.04:0,12,138	1/1:2,14:16:33.02:302,33,0	1/1:0,8:8:24.01:220,24,0	1/1:1,15:16:45.02:412,45,0	1/1:0,4:4:12.01:110,12,0
chr10	65312973	.	TA	T	3859.21	PASS	AC=36;AF=0.667;AN=54;BaseQRankSum=4.108;DP=231;FS=5.880;HRun=7;HaplotypeScore=35.8065;InbreedingCoeff=0.8354;MQ=74.12;MQ0=3;MQRankSum=-4.010;QD=26.25;ReadPosRankSum=4.566;VQSLOD=3.6043;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,14:15:39.09:396,39,0	1/1:0,1:1:3.01:31,3,0	0/0:17,0:12:32.09:0,32,266	0/0:20,0:11:20.70:0,21,193	0/0:6,0:6:18.06:0,18,226	1/1:0,2:2:6.01:61,6,0	1/1:1,3:4:9.02:92,9,0	0/0:21,0:21:54.16:0,54,668	./.	0/0:3,0:3:9.03:0,9,113	0/0:8,0:8:21.07:0,21,264	1/1:2,4:6:12.03:122,12,0	0/0:3,0:3:9.03:0,9,113	1/1:1,4:5:15.03:153,15,0	1/1:0,7:7:21.05:213,21,0	1/1:1,4:5:15.03:153,15,0	1/1:3,15:17:45.10:459,45,0	1/1:4,14:18:30.52:414,31,0	1/1:1,3:3:9.02:91,9,0	1/1:2,5:7:18.02:177,18,0	1/1:0,1:1:3.01:31,3,0	1/1:2,8:10:21.04:213,21,0	0/0:5,0:5:9.03:0,9,113	0/0:1,0:1:3:0,3,26	1/1:4,9:13:36.08:367,36,0	1/1:0,4:4:12.03:122,12,0	1/1:2,18:20:54.12:551,54,0	1/1:0,7:7:21.05:214,21,0
chr10	65313026	.	A	AAAT	192.31	PASS	AC=4;AF=0.105;AN=38;BaseQRankSum=-2.861;DP=162;FS=4.041;HRun=0;HaplotypeScore=31.6979;InbreedingCoeff=0.3832;MQ=68.08;MQ0=2;MQRankSum=-1.004;QD=27.47;ReadPosRankSum=1.462;VQSLOD=3.2158;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:24.07:0,24,316	0/0:2,0:2:6.02:0,6,79	./.	./.	0/0:4,0:5:5.99:0,6,61	1/1:0,5:5:9.03:173,9,0	./.	0/0:14,0:19:13.67:0,14,72	1/1:0,2:2:6.02:115,6,0	./.	./.	0/0:1,0:1:3.01:0,3,40	./.	0/0:3,0:3:3.01:0,3,40	0/0:5,0:5:6.02:0,6,79	0/0:2,0:2:3.01:0,3,39	0/0:20,0:19:24.08:0,24,313	0/0:21,0:21:39.13:0,39,516	0/0:5,0:5:6.02:0,6,79	./.	0/0:2,0:2:3.01:0,3,39	0/0:5,0:5:6.02:0,6,79	./.	0/0:1,0:1:3.01:0,3,40	0/0:7,0:7:6.02:0,6,79	./.	0/0:6,0:6:6.02:0,6,79	0/0:9,0:9:15.05:0,15,197
chr10	65313258	.	GCC	G	8927.74	PASS	AB=0.811;AC=42;AF=0.750;AN=56;BaseQRankSum=-2.039;DP=467;FS=4.267;HRun=11;HaplotypeScore=67.7668;InbreedingCoeff=0.7813;MQ=78.90;MQ0=1;MQRankSum=-2.927;QD=23.31;ReadPosRankSum=3.906;VQSLOD=4.6680;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,24:25:57.12:606,57,0	1/1:1,2:3:3:32,3,0	0/1:16,0:16:3.83:4,0,156	0/0:17,0:17:34.71:0,35,351	0/0:5,0:5:15:0,15,166	1/1:1,13:14:33.08:351,33,0	1/1:1,17:19:36.05:438,36,0	0/1:9,2:23:57.23:57,0,101	0/0:4,0:14:27.94:0,28,109	1/1:0,13:13:39.08:406,39,0	1/1:1,6:7:21.05:222,21,0	1/1:3,17:20:48.11:511,48,0	0/0:7,0:7:15.50:0,15,184	1/1:1,18:19:54.13:575,54,0	1/1:1,20:22:48.07:566,48,0	1/1:2,16:18:45.11:479,45,0	1/1:4,42:46:99:1213,114,0	1/1:0,25:25:72.18:765,72,0	1/1:2,16:18:48.12:510,48,0	1/1:0,6:6:12.02:128,12,0	1/1:8,24:32:58.66:636,59,0	1/1:1,6:8:11.98:183,12,0	0/0:4,0:4:8.90:0,9,107	0/0:32,0:36:79.07:0,79,970	1/1:1,10:11:27.06:287,27,0	1/1:3,15:18:42.08:447,42,0	1/1:1,12:13:29.76:319,30,0	1/1:0,6:6:18.05:192,18,0
chr10	65313855	.	T	TTCTCTCTC	6371.31	PASS	AB=0.595;AC=47;AF=0.904;AN=52;BaseQRankSum=-0.498;DP=636;FS=9.311;HRun=0;HaplotypeScore=145.9261;InbreedingCoeff=0.4795;MQ=61.09;MQ0=17;MQRankSum=-1.397;QD=11.82;ReadPosRankSum=-1.519;VQSLOD=3.1888;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:21,22:53:9.03:216,9,0	1/1:2,3:5:2.86:122,3,0	./.	./.	1/1:9,0:22:12.03:220,12,0	1/1:5,0:16:3.01:64,3,0	1/1:21,0:21:12.04:279,12,0	1/1:32,0:32:21.83:289,22,0	1/1:20,0:19:15.05:293,15,0	1/1:30,0:29:36.59:698,37,0	1/1:11,10:22:6.02:222,6,0	0/1:8,0:25:6.85:36,0,7	0/0:12,0:12:18.03:0,18,351	1/1:11,0:26:9.03:165,9,0	1/1:4,1:15:9.03:251,9,0	1/1:12,0:24:6.02:128,6,0	1/1:25,0:25:25.64:434,26,0	1/1:5,0:11:3.01:64,3,0	1/1:19,0:18:12.70:117,13,0	1/1:18,0:14:8.95:181,9,0	1/1:19,0:17:9.01:191,9,0	1/1:27,0:24:11.31:234,11,0	1/1:8,0:8:0.47:1,0,0	0/0:18,0:20:27.09:0,27,653	1/1:23,0:22:27.08:591,27,0	1/1:13,13:31:52.91:982,53,0	1/1:25,0:25:33.04:471,33,0	1/1:7,0:17:6.91:122,7,0
chr10	65314904	.	TAC	T	236.82	PASS	AB=0.943;AC=19;AF=0.396;AN=48;BaseQRankSum=2.724;DP=614;FS=0.969;HRun=0;HaplotypeScore=85.0402;InbreedingCoeff=0.2771;MQ=65.25;MQ0=10;MQRankSum=-0.694;QD=0.90;ReadPosRankSum=2.478;VQSLOD=1.0284;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:32.71:0,33,330	1/1:7,1:8:3.01:32,3,0	./.	./.	0/0:16,0:16:3.01:0,3,44	0/0:20,0:20:14.78:0,15,193	0/0:19,0:22:15.01:0,15,159	./.	0/0:18,0:18:3.01:0,3,42	1/1:29,0:28:5.27:28,5,0	1/1:12,0:12:2.84:14,3,0	0/0:24,0:24:14.96:0,15,174	0/1:20,2:21:14.19:14,0,145	0/0:23,0:23:14.79:0,15,136	0/1:14,0:16:8.11:8,0,37	0/1:22,0:22:13.76:14,0,146	1/1:16,5:21:11.94:127,12,0	0/0:22,0:23:14.95:0,15,348	1/1:13,2:14:5.91:47,6,0	./.	1/1:48,1:49:3:32,3,0	0/0:12,0:14:2.67:0,3,26	0/0:16,0:16:12.03:0,12,157	0/1:36,4:39:18.69:19,0,453	0/0:15,0:15:12.01:0,12,129	0/1:21,0:21:22.32:22,0,42	0/0:12,0:11:3.01:0,3,44	1/1:5,1:6:3.01:32,3,0
chr10	65314935	.	ACACACACACACACACACACACT	A	996.82	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.292;DP=698;FS=13.675;HRun=0;HaplotypeScore=316.5977;InbreedingCoeff=0.8979;MQ=53.35;MQ0=27;MQRankSum=3.951;QD=22.65;ReadPosRankSum=-0.318;VQSLOD=0.1702;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:51:99:0,120,8477	0/0:9,0:9:27.08:0,27,1689	0/0:27,0:12:36.03:0,36,582	0/0:34,0:14:35.27:0,35,836	0/0:18,0:17:42.13:0,42,2458	0/0:21,0:21:48.14:0,48,3080	0/0:26,0:25:63.15:0,63,3891	0/0:22,0:19:54.42:0,54,1350	0/0:20,0:20:51.12:0,51,2215	1/1:2,29:30:58.15:920,58,0	1/1:0,13:13:2.98:186,3,0	0/0:28,0:28:67.22:0,67,3902	0/0:23,0:22:48.15:0,48,3347	0/0:20,0:19:39.11:0,39,2576	0/0:18,0:18:45.14:0,45,2609	0/0:19,0:19:37:0,37,2799	0/0:31,0:30:77.58:0,78,4866	0/0:22,0:21:61.26:0,61,4661	0/0:17,0:15:44.16:0,44,1684	0/0:16,0:16:42.11:0,42,1810	0/0:77,0:76:99:0,160,8154	0/0:11,0:11:21.06:0,21,1282	0/0:23,0:23:42.07:0,42,2707	0/0:56,0:53:99:0,138,9244	0/0:15,0:14:30.08:0,30,2202	0/0:23,0:22:61.37:0,61,3272	0/0:17,0:16:36.20:0,36,1871	0/0:9,0:9:24.01:0,24,738
chr10	65315628	.	CAA	C	6784.18	PASS	AB=0.630;AC=40;AF=0.714;AN=56;BaseQRankSum=3.875;DP=608;FS=7.712;HRun=14;HaplotypeScore=99.4431;InbreedingCoeff=0.8219;MQ=70.64;MQ0=1;MQRankSum=0.804;QD=14.31;ReadPosRankSum=9.113;VQSLOD=2.9768;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:9,29:42:37.21:607,37,0	1/1:2,11:15:35.49:301,35,0	0/0:12,1:11:20.63:0,21,177	0/0:16,0:14:11.92:0,12,112	0/0:17,1:20:21.14:0,21,488	1/1:2,9:13:29.51:246,30,0	1/1:7,23:32:23.31:423,23,0	0/1:13,2:28:8.58:9,0,141	1/1:3,11:19:12.64:183,13,0	0/0:10,1:19:8.14:0,8,212	0/1:5,2:14:6.36:6,0,51	1/1:7,16:23:14:308,14,0	0/0:21,0:23:59.03:0,59,676	1/1:3,14:18:16.24:270,16,0	1/1:6,15:22:32.83:352,33,0	1/1:5,11:16:32.70:284,33,0	1/1:6,29:35:74.98:694,75,0	1/1:1,15:17:38.91:408,39,0	1/1:9,8:20:29.83:275,30,0	1/1:7,13:21:32.77:352,33,0	1/1:16,17:34:20.41:348,20,0	1/1:3,11:15:32.77:289,33,0	0/0:12,0:13:33.08:0,33,424	0/0:24,0:30:76.62:0,77,873	1/1:3,17:20:39:356,39,0	1/1:6,14:24:18.64:372,19,0	1/1:9,19:32:58.88:491,59,0	1/1:2,8:13:20.34:209,20,0
chr10	65316810	.	ACATGGGCACATGCG	A	3810.32	PASS	AB=0.686;AC=23;AF=0.639;AN=36;BaseQRankSum=8.639;DP=474;FS=17.509;HRun=0;HaplotypeScore=179.8204;InbreedingCoeff=0.6056;MQ=67.31;MQ0=0;MQRankSum=-5.544;QD=18.41;ReadPosRankSum=-1.245;VQSLOD=1.5887;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	1/1:6,4:10:3.01:53,3,0	./.	./.	0/0:15,0:15:18.06:0,18,933	1/1:10,10:20:9.03:270,9,0	1/1:15,12:27:6.02:236,6,0	./.	./.	0/0:24,0:24:57.20:0,57,3352	0/0:8,0:8:12.04:0,12,713	1/1:14,6:20:3.01:111,3,0	0/0:14,0:14:42.14:0,42,2328	1/1:7,9:16:6.02:236,6,0	./.	1/1:4,3:7:3.01:118,3,0	1/1:12,8:20:6.02:170,6,0	1/1:9,8:17:15.05:590,15,0	1/1:12,3:15:9.03:271,9,0	./.	./.	./.	0/0:11,0:11:27.09:0,27,1632	0/0:24,0:24:57.20:0,57,3213	./.	0/1:19,16:35:99:1469,0,151	1/1:5,6:11:2.84:51,3,0	1/1:3,6:9:6.02:236,6,0
chr10	65316869	.	CGCACAT	C	1379.13	PASS	AB=1.000;AC=30;AF=0.556;AN=54;BaseQRankSum=5.245;DP=474;FS=30.900;HRun=0;HaplotypeScore=154.1001;InbreedingCoeff=0.5731;MQ=46.37;MQ0=25;MQRankSum=1.669;QD=4.79;ReadPosRankSum=-0.173;VQSLOD=1.0518;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:29,1:30:3.92:94,4,0	1/1:7,0:7:3.01:55,3,0	./.	0/1:9,0:5:1.30:1,0,8	0/0:11,0:10:24:0,24,472	1/1:20,0:18:11.13:218,11,0	0/0:30,0:28:4.97:0,5,19	0/0:18,0:16:28.54:0,29,485	0/0:13,0:12:3.91:0,4,22	0/0:26,0:26:29.18:0,29,972	0/0:4,0:3:3.01:0,3,43	1/1:20,0:19:9.64:78,10,0	0/0:15,0:14:29.45:0,29,459	1/1:22,0:22:0.38:58,0,0	1/1:10,0:10:5.47:60,5,0	1/1:10,1:10:11.79:128,12,0	1/1:23,2:23:24.81:257,25,0	1/1:26,0:23:7.54:47,8,0	0/1:19,0:19:1.65:136,0,2	1/1:16,0:16:4.90:68,5,0	1/1:36,0:35:5.27:62,5,0	0/0:13,1:14:0:0,0,1	0/0:6,0:6:9.02:0,9,118	0/0:31,0:29:43.80:0,44,1144	1/1:14,0:12:12.98:164,13,0	1/1:20,0:19:2.57:120,3,0	0/0:14,0:12:0.29:0,0,1	1/1:3,0:3:0.35:1,0,0
chr10	65318635	.	T	TG	637.67	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-4.730;DP=544;FS=3.370;HRun=2;HaplotypeScore=54.4022;InbreedingCoeff=0.9977;MQ=86.03;MQ0=0;MQRankSum=-2.555;QD=37.51;ReadPosRankSum=0.497;VQSLOD=4.1531;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,102,1251	0/0:10,0:10:27.08:0,27,334	0/0:17,0:17:48.06:0,48,535	0/0:21,0:21:57.16:0,57,682	0/0:11,0:11:33.08:0,33,384	0/0:15,0:15:45.14:0,45,557	0/0:19,0:19:57.16:0,57,693	0/0:25,0:25:60.17:0,60,713	1/1:0,17:17:51.17:733,51,0	0/0:25,0:25:75.23:0,75,919	0/0:15,0:15:42.13:0,42,520	0/0:25,0:25:75.22:0,75,917	0/0:10,0:10:30.09:0,30,369	0/0:15,0:15:45.13:0,45,544	0/0:28,0:28:81.22:0,81,966	0/0:27,0:27:78.23:0,78,954	0/0:26,0:26:72.20:0,72,876	0/0:12,0:12:33.09:0,33,397	0/0:14,0:14:39.12:0,39,483	0/0:20,0:20:60.18:0,60,731	0/0:17,0:17:45.14:0,45,557	0/0:17,0:17:51.16:0,51,632	0/0:29,0:29:84.24:0,84,1016	0/0:19,0:19:57.17:0,57,694	0/0:18,0:18:54.16:0,54,656	0/0:19,0:19:57.18:0,57,706	0/0:23,0:23:60.16:0,60,719	0/0:13,0:13:39.11:0,39,470
chr10	65320820	.	AG	A	6886.32	PASS	AB=1.000;AC=37;AF=0.661;AN=56;BaseQRankSum=3.098;DP=473;FS=7.774;HRun=9;HaplotypeScore=55.5089;InbreedingCoeff=0.9366;MQ=76.03;MQ0=0;MQRankSum=-2.982;QD=20.68;ReadPosRankSum=3.176;VQSLOD=5.5343;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,24:27:60.02:549,60,0	1/1:2,8:10:20.92:182,21,0	0/0:13,0:10:21.06:0,21,234	0/1:14,0:13:4.32:4,0,165	0/0:12,0:12:33.09:0,33,381	1/1:3,18:21:45.02:411,45,0	1/1:4,22:26:34.66:570,35,0	0/0:18,0:18:21.76:0,22,190	0/0:14,0:15:36.11:0,36,415	0/0:6,0:16:24.58:0,25,179	0/0:4,0:12:26.18:0,26,187	1/1:2,9:11:21:192,21,0	0/0:20,1:21:20.69:0,21,469	1/1:4,13:17:30.01:274,30,0	1/1:2,13:15:36.01:330,36,0	1/1:1,7:8:18.01:165,18,0	1/1:1,21:21:60.03:549,60,0	1/1:1,17:18:48.02:439,48,0	1/1:0,8:9:23.03:194,23,0	1/1:5,17:22:41.88:365,42,0	1/1:3,14:17:39.02:357,39,0	1/1:0,11:11:27.01:247,27,0	0/0:14,0:14:30.09:0,30,345	0/0:19,0:19:54.14:0,54,605	1/1:3,12:15:36.01:329,36,0	1/1:3,17:20:51.03:467,51,0	1/1:2,29:31:90.05:823,90,0	1/1:1,18:19:48.03:439,48,0
chr10	65321564	.	AGG	A	680.17	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.214;DP=561;FS=0.000;HRun=5;HaplotypeScore=71.4603;InbreedingCoeff=0.9598;MQ=82.90;MQ0=0;MQRankSum=-1.897;QD=34.01;ReadPosRankSum=0.458;VQSLOD=3.1251;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:81.25:0,81,1375	0/0:6,0:6:18.06:0,18,323	0/0:21,0:22:44.27:0,44,843	0/0:18,0:18:46.34:0,46,656	0/0:19,0:19:51.17:0,51,893	0/0:12,0:12:36.12:0,36,660	0/0:31,0:31:90.31:0,90,1638	0/0:23,0:23:63.22:0,63,1150	0/0:24,0:24:66.23:0,66,1205	1/1:1,15:16:45.15:629,45,0	1/1:0,4:4:12.04:168,12,0	0/0:37,0:37:99:0,105,1876	0/0:22,0:22:63.20:0,63,1114	0/0:18,0:18:48.16:0,48,880	0/0:14,0:14:39.12:0,39,675	0/0:22,0:22:63.21:0,63,1122	0/0:25,0:25:69.22:0,69,1225	0/0:25,0:25:75.26:0,75,1353	0/0:19,0:19:51.17:0,51,919	0/0:7,0:7:18.06:0,18,330	0/0:53,0:53:99:0,157,2809	0/0:14,0:14:42.14:0,42,768	0/0:13,0:13:36.11:0,36,618	0/0:33,0:32:93.29:0,93,1661	0/0:12,0:12:36.12:0,36,659	0/0:17,1:18:12.11:0,12,853	0/0:17,0:17:51.17:0,51,894	0/0:9,0:9:27.09:0,27,462
chr10	65324809	.	G	GCACACA	11938.36	PASS	AB=0.773;AC=39;AF=0.696;AN=56;BaseQRankSum=-5.912;DP=595;FS=7.099;HRun=0;HaplotypeScore=142.3967;InbreedingCoeff=0.8460;MQ=55.75;MQ0=8;MQRankSum=-9.947;QD=29.70;ReadPosRankSum=0.493;VQSLOD=4.2474;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:22,5:32:15.05:373,15,0	1/1:8,2:12:12.04:271,12,0	0/0:37,0:15:18.02:0,18,255	0/0:27,0:15:12.92:0,13,184	0/0:13,0:17:30.02:0,30,585	1/1:10,10:20:33.11:1021,33,0	1/1:13,2:19:13.29:396,13,0	0/0:27,0:27:33.10:0,33,626	1/1:10,0:17:21.03:490,21,0	1/1:7,0:29:3.76:154,4,0	0/0:5,0:20:17.31:0,17,110	1/1:2,4:10:21.07:508,21,0	0/0:13,0:13:27.09:0,27,565	1/1:5,7:15:27.09:822,27,0	1/1:10,7:24:27.09:706,27,0	0/1:12,3:17:44.67:474,0,45	1/1:12,7:25:19.58:510,20,0	1/1:16,5:23:27.06:691,27,0	1/1:14,3:20:17.38:487,17,0	1/1:11,12:27:33.11:1081,33,0	1/1:19,4:23:5.85:137,6,0	1/1:16,9:29:35.38:1044,35,0	0/0:17,0:17:39.13:0,39,797	0/0:30,0:35:69.23:0,69,1348	1/1:7,11:19:29.37:983,29,0	1/1:8,9:19:36.12:1006,36,0	1/1:7,2:11:12.04:352,12,0	1/1:1,5:7:15.05:433,15,0
chr10	65324925	.	TTTTG	T	1280.64	PASS	AB=0.981;AC=20;AF=0.357;AN=56;BaseQRankSum=9.218;DP=506;FS=1.875;HRun=0;HaplotypeScore=113.9850;InbreedingCoeff=-0.1530;MQ=69.47;MQ0=8;MQRankSum=-6.233;QD=4.40;ReadPosRankSum=7.993;VQSLOD=1.0419;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:28:25.32:220,25,0	0/1:6,0:6:11.95:35,0,12	0/0:39,0:15:0.58:0,1,170	0/0:38,0:18:10.51:0,11,184	0/0:22,0:22:47.87:0,48,680	0/1:16,0:15:56.03:56,0,63	0/1:16,0:16:12.15:12,0,126	0/0:31,0:31:80.80:0,81,769	0/0:8,0:8:17.83:0,18,146	0/1:27,0:27:50.57:86,0,51	1/1:14,0:14:28.93:121,29,0	0/0:10,0:10:4.42:0,4,64	0/0:14,0:14:37.63:0,38,457	0/1:11,0:11:5.93:6,0,60	0/0:7,0:7:1.56:0,2,57	0/1:13,5:18:68.89:129,0,69	0/1:23,0:23:55.81:233,0,56	1/1:11,0:11:13.88:98,14,0	0/0:21,0:18:5.60:0,6,142	0/1:17,0:17:82.71:83,0,113	0/1:19,0:18:27.39:27,0,54	0/1:13,0:13:39.67:111,0,40	0/0:8,0:8:16.84:0,17,241	0/0:17,0:16:30.42:0,30,415	0/1:23,0:23:60.44:60,0,155	0/1:15,0:13:70.19:70,0,90	0/1:18,1:18:71.48:71,0,121	0/1:15,0:15:30.64:31,0,153
chr10	65324948	.	TTTTTG	T	406.90	PASS	AB=0.974;AC=14;AF=0.250;AN=56;BaseQRankSum=7.887;DP=490;FS=17.286;HRun=0;HaplotypeScore=105.6881;InbreedingCoeff=-0.2215;MQ=43.81;MQ0=65;MQRankSum=-5.800;QD=1.76;ReadPosRankSum=4.626;VQSLOD=0.7682;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:34,0:28:22.03:22,0,82	0/1:6,0:4:7.86:8,0,14	0/0:23,0:3:2.58:0,3,58	0/0:23,0:6:0.32:0,0,13	0/0:24,0:22:55.13:0,55,933	0/1:13,0:9:14.39:14,0,19	0/1:15,0:12:4.35:4,0,108	0/0:25,0:25:52.71:0,53,920	0/0:9,0:7:14.08:0,14,156	0/1:25,0:24:46.53:122,0,47	1/1:15,0:14:4.42:103,4,0	0/1:6,5:9:10.22:56,0,10	0/0:14,0:12:33:0,33,465	0/1:10,0:10:28.36:54,0,28	0/0:9,0:7:5.74:0,6,38	0/0:18,0:15:2.12:0,2,55	0/1:31,0:22:9.95:10,0,62	0/0:17,0:10:11.28:0,11,61	0/0:14,0:10:11.97:0,12,154	0/1:23,0:22:48.49:48,0,232	0/0:19,0:16:1.20:0,1,180	0/1:13,0:13:26.44:46,0,26	0/0:13,0:10:29.22:0,29,433	0/0:23,0:14:26.10:0,26,408	0/1:19,0:18:28.46:28,0,154	0/1:16,0:12:36.44:36,0,63	0/0:16,0:13:13.44:0,13,110	0/0:12,0:9:16.36:0,16,148
chr10	65325851	.	T	TTG	4114.73	PASS	AB=0.781;AC=28;AF=0.538;AN=52;BaseQRankSum=-1.561;DP=534;FS=0.512;HRun=0;HaplotypeScore=106.1440;InbreedingCoeff=0.3177;MQ=63.53;MQ0=14;MQRankSum=-2.326;QD=11.27;ReadPosRankSum=-0.467;VQSLOD=3.4334;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	1/1:2,6:8:6.02:95,6,0	0/1:38,0:23:11.28:11,0,224	0/0:16,0:6:11.72:0,12,122	0/0:24,0:25:66:0,66,748	1/1:14,4:17:13.82:246,14,0	1/1:22,1:23:36.11:536,36,0	1/1:17,12:28:34.61:519,35,0	0/0:6,0:6:12.04:0,12,144	0/0:25,0:25:63.17:0,63,736	0/0:17,0:17:38.95:0,39,446	1/1:7,14:21:6.02:95,6,0	0/0:19,0:19:35.99:0,36,398	1/1:9,2:10:12.04:192,12,0	0/1:8,10:18:38.94:39,0,63	1/1:9,17:26:3.15:12,3,0	1/1:15,1:16:13.30:280,13,0	0/1:6,3:10:33.78:126,0,34	0/1:18,3:20:11.63:417,0,12	0/1:10,8:19:21.74:107,0,22	0/1:17,0:17:14.77:267,0,15	1/1:20,3:22:21.05:301,21,0	0/0:17,0:17:29.92:0,30,344	0/0:13,0:13:24.06:0,24,278	./.	0/1:12,12:24:27.24:512,0,27	0/1:10,17:27:65.13:163,0,65	1/1:9,7:16:14.54:200,15,0
chr10	65325871	.	C	CAGAGAGAGAG	3043.91	PASS	AB=0.968;AC=37;AF=0.712;AN=52;BaseQRankSum=-0.806;DP=554;FS=2.158;HRun=0;HaplotypeScore=181.9626;InbreedingCoeff=0.5884;MQ=53.30;MQ0=18;MQRankSum=-3.679;QD=8.70;ReadPosRankSum=-2.293;VQSLOD=2.4016;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:15:8.91:120,9,0	1/1:7,0:7:3.01:42,3,0	0/0:29,0:13:3:0,3,26	./.	0/0:33,0:33:24.07:0,24,569	1/1:18,0:17:6.02:126,6,0	0/1:29,0:29:23.12:39,0,23	1/1:25,0:24:15.04:219,15,0	1/1:24,0:24:9.38:167,9,0	0/0:26,0:28:21.06:0,21,470	0/0:20,0:20:12.04:0,12,348	1/1:19,0:19:6.49:222,6,0	0/0:22,0:23:22.40:0,22,623	1/1:11,1:11:2.91:74,3,0	1/1:16,0:16:3.01:75,3,0	1/1:21,0:21:0.06:0,0,0	1/1:18,0:18:15.05:487,15,0	1/1:9,0:9:6.91:225,7,0	1/1:14,2:16:9.02:260,9,0	1/1:19,0:19:6.90:117,7,0	1/1:16,0:17:3.01:97,3,0	1/1:20,0:20:3.01:94,3,0	0/0:14,0:16:11.28:0,11,196	0/0:16,0:16:15.01:0,15,364	./.	1/1:19,0:19:9.03:396,9,0	1/1:30,0:30:8.77:155,9,0	1/1:11,0:11:12.96:301,13,0
chr10	65327429	.	T	TC	395.16	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-4.275;DP=571;FS=3.262;HRun=8;HaplotypeScore=59.0916;InbreedingCoeff=0.9221;MQ=70.16;MQ0=0;MQRankSum=0.237;QD=19.76;ReadPosRankSum=-1.523;VQSLOD=3.1649;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:77.87:0,78,685	0/0:12,0:12:33.01:0,33,302	0/0:26,0:23:34.54:0,35,316	0/0:10,0:9:7.98:0,8,116	0/0:21,0:21:60.03:0,60,548	0/0:31,0:31:67.10:0,67,690	0/0:14,0:14:33:0,33,302	0/0:25,0:25:59.99:0,60,539	1/1:3,17:20:17.78:485,18,0	0/0:22,0:22:57:0,57,511	0/0:18,0:18:50.92:0,51,453	0/0:21,0:21:47.99:0,48,430	0/0:17,0:17:51:0,51,458	0/0:18,0:18:47.98:0,48,424	0/0:24,0:24:66.01:0,66,598	0/0:20,0:20:51.02:0,51,467	0/0:19,0:19:51.03:0,51,466	0/0:31,0:31:77.99:0,78,702	0/0:23,0:23:50.98:0,51,458	0/0:21,0:21:45:0,45,407	0/0:19,0:19:54:0,54,485	0/0:20,0:20:48.02:0,48,439	0/0:22,0:22:59.98:0,60,532	0/0:19,0:19:45:0,45,406	0/0:20,0:20:59.96:0,60,539	0/0:18,0:18:47.99:0,48,427	0/0:23,0:23:59.96:0,60,536	0/0:9,0:9:24.01:0,24,220
chr10	65327666	.	GGTGTGT	G	5956.83	PASS	AB=0.840;AC=36;AF=0.667;AN=54;BaseQRankSum=5.508;DP=736;FS=3.074;HRun=0;HaplotypeScore=192.3046;InbreedingCoeff=0.7477;MQ=60.83;MQ0=13;MQRankSum=-6.959;QD=12.57;ReadPosRankSum=2.850;VQSLOD=4.0238;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:29,18:49:25.79:328,26,0	1/1:6,1:7:9.01:135,9,0	./.	0/0:36,0:18:9.03:0,9,130	0/0:9,0:18:20.96:0,21,518	1/1:8,10:19:17.63:295,18,0	1/1:19,7:28:10.82:164,11,0	0/0:29,0:28:46.04:0,46,864	0/0:13,0:26:27.09:0,27,540	0/0:38,0:40:80.28:0,80,1346	0/0:10,0:19:9.50:0,10,173	1/1:18,18:37:27.09:472,27,0	0/0:13,0:17:33.11:0,33,881	1/1:11,23:36:42.08:749,42,0	1/1:12,15:28:28.27:505,28,0	1/1:8,18:28:33.11:642,33,0	1/1:13,16:30:27.08:512,27,0	1/1:6,10:16:17.52:372,18,0	1/1:12,2:18:15.05:239,15,0	1/1:6,8:16:6.84:78,7,0	1/1:28,16:43:2.21:20,2,0	1/1:5,12:18:3.01:41,3,0	0/1:13,0:13:1.45:1,0,441	0/0:36,0:39:62.41:0,62,1831	1/1:6,14:22:8.90:160,9,0	0/1:18,17:36:48.25:738,0,48	1/1:4,9:13:15.05:298,15,0	1/1:3,9:12:12.04:209,12,0
chr10	65328847	.	G	GTCTCTCTC	5238.72	PASS	AB=0.870;AC=38;AF=0.760;AN=50;BaseQRankSum=1.619;DP=495;FS=10.404;HRun=0;HaplotypeScore=140.0480;InbreedingCoeff=0.5299;MQ=71.51;MQ0=12;MQRankSum=-4.518;QD=16.02;ReadPosRankSum=-1.144;VQSLOD=3.3239;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:17:3.01:41,3,0	1/1:7,0:7:8.99:180,9,0	0/0:44,0:28:3.01:0,3,75	0/0:44,0:18:4.59:0,5,48	0/1:11,0:17:29.42:29,0,110	1/1:12,0:12:9.03:252,9,0	1/1:11,0:9:6:100,6,0	1/1:35,0:34:39.97:977,40,0	1/1:12,0:9:3.01:74,3,0	1/1:13,13:25:36.01:919,36,0	./.	./.	0/0:17,0:17:27.09:0,27,667	./.	1/1:17,0:17:2.95:74,3,0	1/1:12,0:12:6.44:103,6,0	1/1:15,0:15:9.01:157,9,0	1/1:10,0:10:14.62:379,15,0	1/1:21,0:20:14.23:225,14,0	1/1:19,0:19:9.96:176,10,0	1/1:9,0:9:3.01:75,3,0	1/1:18,0:16:2.84:50,3,0	0/0:13,0:14:14.82:0,15,364	0/0:11,0:11:9.03:0,9,181	0/1:21,0:20:0:0,0,0	1/1:8,0:20:39.04:852,39,0	1/1:12,0:12:11.99:231,12,0	1/1:15,0:14:15:345,15,0
chr10	65328882	.	TCA	T	118.11	PASS	AB=0.974;AC=13;AF=0.250;AN=52;BaseQRankSum=0.725;DP=416;FS=2.332;HRun=0;HaplotypeScore=89.4381;InbreedingCoeff=-0.1480;MQ=40.26;MQ0=17;MQRankSum=1.143;QD=0.60;ReadPosRankSum=-1.028;VQSLOD=1.6774;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:23:18.26:18,0,135	0/1:10,0:10:6.07:42,0,6	./.	./.	0/1:20,0:20:14.97:15,0,153	1/1:9,0:14:5.68:28,6,0	0/0:12,0:9:2.88:0,3,15	0/0:24,0:23:0:0,0,0	0/0:8,0:4:3:0,3,26	0/0:11,0:10:11.93:0,12,99	0/1:10,0:10:0.42:0,0,17	0/1:12,0:11:27.34:56,0,27	0/0:18,0:18:3.65:0,4,177	0/0:10,0:10:6.01:0,6,64	0/1:18,0:18:20.48:20,0,103	0/0:14,0:13:6.02:0,6,89	0/1:18,0:17:24.97:25,0,172	0/0:12,0:12:20.97:0,21,188	0/0:14,0:13:3.90:0,4,37	0/0:18,0:18:15.02:0,15,188	0/1:13,0:11:0:0,0,0	0/0:16,0:13:3.01:0,3,45	0/1:17,0:16:16.20:16,0,132	0/1:18,5:22:11.46:11,0,238	0/0:18,0:18:5.98:0,6,53	0/0:10,0:10:7.82:0,8,68	0/1:15,2:17:14.53:15,0,138	0/0:10,0:8:3.01:0,3,44
chr10	65331916	.	T	TAAA	7151.36	PASS	AB=0.772;AC=42;AF=0.750;AN=56;BaseQRankSum=-2.970;DP=405;FS=2.604;HRun=10;HaplotypeScore=61.1855;InbreedingCoeff=0.6479;MQ=54.52;MQ0=21;MQRankSum=1.949;QD=21.80;ReadPosRankSum=1.200;VQSLOD=2.7491;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,18:22:36.08:634,36,0	1/1:3,5:7:12.04:231,12,0	0/0:6,0:5:10.78:0,11,106	0/1:2,0:1:0:0,0,0	0/1:6,0:24:17.53:18,0,49	1/1:9,18:26:48.16:919,48,0	0/1:5,0:9:0.52:88,0,1	0/0:28,0:27:68.82:0,69,756	0/0:9,0:9:17.98:0,18,200	0/0:16,0:15:35.94:0,36,390	0/0:17,0:17:42.08:0,42,488	1/1:5,10:15:21.07:404,21,0	1/1:2,0:12:13.71:32,14,0	1/1:3,4:8:8.99:135,9,0	0/1:7,3:9:5.70:152,0,6	1/1:4,5:9:15.05:271,15,0	1/1:5,19:24:45:781,45,0	1/1:7,10:17:14.14:394,14,0	1/1:5,8:12:26.93:337,27,0	1/1:4,8:11:23.96:346,24,0	1/1:2,2:3:6.02:115,6,0	1/1:2,0:2:5.98:78,6,0	1/1:4,0:12:9.97:23,10,0	1/1:2,0:6:4.98:12,5,0	1/1:2,11:12:27.05:482,27,0	1/1:8,20:32:65.03:947,65,0	1/1:8,8:17:18.06:308,18,0	1/1:5,12:15:24.08:446,24,0
chr10	65333941	.	C	CCTCT	1667.07	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-5.498;DP=635;FS=0.000;HRun=0;HaplotypeScore=106.4931;InbreedingCoeff=0.9939;MQ=85.98;MQ0=0;MQRankSum=-4.908;QD=43.87;ReadPosRankSum=-0.403;VQSLOD=3.9627;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,114,2091	0/0:8,0:8:18.06:0,18,310	0/0:17,0:17:42.14:0,42,750	0/0:24,0:24:48.11:0,48,798	0/0:22,0:22:63.16:0,63,1064	0/0:19,0:19:51.17:0,51,938	0/0:24,0:24:69.20:0,69,1209	0/0:28,0:28:72.24:0,72,1292	0/0:23,0:23:63.20:0,63,1129	1/1:4,13:17:36.12:919,36,0	1/1:5,16:21:33.11:869,33,0	0/0:21,0:21:51.15:0,51,906	0/0:40,0:40:99:0,105,1721	0/0:22,0:22:63.22:0,63,1153	0/0:29,0:29:75.26:0,75,1367	0/0:16,0:15:48.16:0,48,866	0/0:29,0:29:84.18:0,84,1382	0/0:26,0:26:75.26:0,75,1363	0/0:23,0:23:51.13:0,51,879	0/0:16,0:16:48.15:0,48,853	0/0:40,0:40:99:0,105,1863	0/0:21,0:21:57.20:0,57,1029	0/0:9,0:9:24.06:0,24,383	0/0:30,0:30:81.24:0,81,1450	0/0:23,0:23:63.22:0,63,1159	0/0:17,0:17:33.11:0,33,607	0/0:21,0:21:54.19:0,54,987	0/0:9,0:9:27.09:0,27,473
chr10	65334421	.	TG	T	17303.03	PASS	AB=0.521;AC=37;AF=0.661;AN=56;BaseQRankSum=11.841;DP=746;FS=8.140;HRun=2;HaplotypeScore=72.6647;InbreedingCoeff=0.9227;MQ=67.30;MQ0=3;MQRankSum=-1.770;QD=35.24;ReadPosRankSum=6.089;VQSLOD=4.8137;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:0,41:41:99:1438,111,0	1/1:0,9:9:27.05:331,27,0	0/0:30,0:29:81.22:0,81,1122	0/0:35,0:31:89.15:0,89,1273	0/0:33,0:33:96.31:0,96,1406	1/1:0,33:33:87.28:1129,87,0	1/1:1,27:28:72.23:935,72,0	0/0:27,0:27:81.27:0,81,1196	1/1:0,22:22:66.21:856,66,0	0/0:31,0:31:93.31:0,93,1375	0/0:25,0:25:75.24:0,75,1102	1/1:0,18:18:51.17:660,51,0	0/0:25,0:25:75.21:0,75,1098	1/1:0,17:17:48.16:623,48,0	1/1:0,28:28:81.26:1052,81,0	1/1:0,18:18:45.15:584,45,0	1/1:0,36:36:99:1285,99,0	1/1:1,33:34:84.27:1090,84,0	1/1:1,26:26:78.24:987,78,0	1/1:0,23:23:69.16:875,69,0	1/1:1,34:35:99:1285,99,0	1/1:0,18:18:44.75:564,45,0	0/0:21,0:21:60.20:0,60,895	0/0:28,0:28:84.27:0,84,1240	1/1:0,27:27:75.24:974,75,0	0/1:2,23:25:14.71:805,0,15	1/1:0,32:32:96.31:1246,96,0	1/1:0,20:20:45.15:584,45,0
chr10	65334886	.	ATC	A	16984.83	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=13.302;DP=653;FS=1.326;HRun=0;HaplotypeScore=83.8393;InbreedingCoeff=0.9740;MQ=77.05;MQ0=0;MQRankSum=-3.913;QD=40.63;ReadPosRankSum=5.759;VQSLOD=6.3193;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,46:47:99:1929,126,0	1/1:0,3:3:6.02:92,6,0	0/0:8,0:8:21.91:0,22,324	0/0:21,0:21:63.21:0,63,1079	0/0:24,0:24:69.04:0,69,1332	1/1:0,23:23:57.19:873,57,0	1/1:0,22:22:63.21:964,63,0	0/0:32,0:32:96.33:0,96,1846	0/0:26,0:26:78.27:0,78,1506	0/0:39,0:39:99:0,117,2135	0/0:19,0:19:54.17:0,54,1009	1/1:0,20:20:60.20:918,60,0	0/0:20,0:20:60.21:0,60,1135	1/1:0,23:23:69.23:1056,69,0	1/1:0,20:20:54.18:827,54,0	1/1:0,18:18:45.15:689,45,0	1/1:0,34:34:99:1516,99,0	1/1:0,21:21:57.19:873,57,0	1/1:3,26:30:81.19:1154,81,0	1/1:1,22:23:63.21:965,63,0	1/1:1,22:23:57.19:873,57,0	1/1:2,22:24:54.18:826,54,0	0/0:29,0:29:87.26:0,87,1596	0/0:17,0:17:51.16:0,51,951	1/1:0,20:20:51.16:781,51,0	1/1:1,21:22:8.25:907,8,0	1/1:0,33:33:78.26:1193,78,0	1/1:0,12:12:36.12:551,36,0
chr10	65335645	.	TCA	T	2579.20	PASS	AB=0.861;AC=37;AF=0.712;AN=52;BaseQRankSum=4.815;DP=591;FS=0.583;HRun=0;HaplotypeScore=108.5579;InbreedingCoeff=0.2650;MQ=67.44;MQ0=18;MQRankSum=1.135;QD=6.23;ReadPosRankSum=4.220;VQSLOD=2.8823;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:28,11:38:8.96:56,0,9	1/1:4,3:7:11.05:97,11,0	./.	./.	0/0:13,0:26:20.92:0,21,176	1/1:18,3:21:20.63:169,21,0	0/1:18,10:31:10.22:238,0,10	0/0:24,0:24:8.82:0,9,73	1/1:8,0:9:2.84:14,3,0	0/0:11,0:21:41.59:0,42,401	0/0:18,0:26:9.01:0,9,98	1/1:14,6:20:23.78:232,24,0	0/1:14,0:15:25.98:26,0,262	1/1:11,7:18:17.71:159,18,0	1/1:9,5:16:23.84:233,24,0	0/1:8,11:20:99:151,0,106	1/1:9,8:17:9.02:98,9,0	1/1:9,3:14:20.72:191,21,0	1/1:13,3:15:4.29:36,4,0	1/1:14,0:15:18.56:133,19,0	0/1:31,2:33:16.62:141,0,17	1/1:11,8:19:12.03:131,12,0	0/1:11,0:12:22.16:22,0,220	0/1:35,0:36:31.68:32,0,497	1/1:11,1:15:14.33:107,14,0	1/1:9,8:15:20.85:229,21,0	1/1:7,5:14:16.26:130,16,0	1/1:5,3:7:12.03:126,12,0
chr10	65337015	.	A	AG	1691.35	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-7.931;DP=688;FS=8.066;HRun=2;HaplotypeScore=69.4084;InbreedingCoeff=0.9990;MQ=87.07;MQ0=1;MQRankSum=-0.951;QD=35.24;ReadPosRankSum=-0.370;VQSLOD=3.5255;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,135,1654	0/0:11,0:11:33.10:0,33,409	0/0:20,0:20:51.15:0,51,612	0/0:32,0:31:72.25:0,72,932	0/0:19,0:19:51.14:0,51,613	0/0:22,0:22:63.20:0,63,781	0/0:32,0:32:87.26:0,87,1060	1/1:2,24:26:69.23:992,69,0	1/1:0,22:22:57.19:821,57,0	0/0:31,0:31:84.22:0,84,1021	0/0:10,0:10:27.08:0,27,331	0/0:28,0:28:78.23:0,78,948	0/0:30,0:30:81.24:0,81,989	0/0:27,0:27:75.24:0,75,930	0/0:26,0:26:72.21:0,72,872	0/0:17,0:17:48.15:0,48,594	0/0:37,0:37:99:0,108,1339	0/0:20,0:20:60.19:0,60,742	0/0:22,0:22:60.19:0,60,743	0/0:13,0:13:36.11:0,36,445	0/0:49,0:49:99:0,147,1819	0/0:21,0:21:60.19:0,60,743	0/0:15,0:15:42.12:0,42,503	0/0:23,0:23:66.16:0,66,799	0/0:24,0:24:63.20:0,63,780	0/0:31,0:31:90.26:0,90,1092	0/0:22,0:22:66.19:0,66,801	0/0:10,0:10:30.09:0,30,368
chr10	65337146	.	TCA	T	3093.30	PASS	AB=0.848;AC=42;AF=0.778;AN=54;BaseQRankSum=3.941;DP=589;FS=6.977;HRun=0;HaplotypeScore=84.9329;InbreedingCoeff=0.3900;MQ=61.24;MQ0=7;MQRankSum=2.273;QD=6.94;ReadPosRankSum=1.919;VQSLOD=2.1417;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,3:17:14.25:138,14,0	1/1:5,2:7:2.97:33,3,0	./.	0/0:34,0:24:0.89:0,1,2	0/0:10,0:12:6.01:0,6,71	1/1:7,5:12:5.09:122,5,0	1/1:22,12:33:20.83:210,21,0	0/0:29,0:29:16.56:0,17,103	0/1:25,0:24:9.47:30,0,9	1/1:21,4:25:7.89:90,8,0	1/1:5,0:5:0.47:1,0,0	1/1:17,5:21:26.89:265,27,0	1/1:11,7:17:20.89:210,21,0	1/1:15,5:22:9.49:99,9,0	1/1:22,7:29:29.87:297,30,0	1/1:7,6:13:9.02:98,9,0	1/1:12,10:22:32.52:322,33,0	1/1:9,5:14:14.87:145,15,0	0/1:11,1:12:14.37:38,0,14	1/1:8,5:15:14.84:145,15,0	1/1:37,17:53:9.84:255,10,0	1/1:11,7:19:20.89:210,21,0	0/1:6,1:7:49.51:50,0,57	0/0:42,1:42:24.38:0,24,704	1/1:11,8:19:12.03:131,12,0	1/1:16,6:21:14.24:131,14,0	1/1:7,7:14:15.04:164,15,0	0/1:6,6:13:32.87:68,0,33
chr10	65337186	.	ACACGCTCACT	A	1590.31	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=7.711;DP=707;FS=33.292;HRun=0;HaplotypeScore=207.5831;InbreedingCoeff=0.5763;MQ=54.83;MQ0=5;MQRankSum=-4.446;QD=13.36;ReadPosRankSum=-4.119;VQSLOD=0.5487;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:46.54:0,47,1572	0/0:7,0:7:6.31:0,6,332	0/1:14,0:7:1.33:1,0,369	0/0:26,0:17:47.67:0,48,1083	0/0:10,0:10:21.07:0,21,743	0/0:17,0:17:25.20:0,25,956	0/0:36,0:35:29.91:0,30,1548	1/1:33,0:31:78.58:1210,79,0	1/1:4,22:25:12.04:389,12,0	0/1:24,0:24:38.83:93,0,39	1/1:11,0:11:5.67:15,6,0	0/0:23,0:22:43.29:0,43,1317	0/0:27,0:25:42.78:0,43,1402	0/0:33,0:32:66.22:0,66,1780	0/0:34,0:33:34.42:0,34,1806	0/0:20,0:20:36.48:0,36,963	0/0:29,0:28:44.96:0,45,1287	0/0:20,0:19:34.08:0,34,1323	0/0:20,0:19:53.96:0,54,1258	0/0:17,0:17:38.87:0,39,1328	0/0:79,0:79:99:0,141,4220	0/0:22,0:22:44.20:0,44,1538	0/1:11,0:11:24.81:25,0,544	0/0:45,0:45:99:0,107,4079	0/0:20,0:20:39.13:0,39,1184	0/0:33,0:32:81.27:0,81,2366	0/0:19,0:19:51.05:0,51,1261	0/0:19,0:19:42.09:0,42,1215
chr10	65337188	.	ACGCTCACT	A	1518.55	PASS	AB=1.000;AC=8;AF=0.143;AN=56;BaseQRankSum=8.328;DP=691;FS=48.110;HRun=0;HaplotypeScore=183.1305;InbreedingCoeff=0.6993;MQ=55.42;MQ0=5;MQRankSum=-5.898;QD=15.04;ReadPosRankSum=-3.155;VQSLOD=0.7143;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:60.35:0,60,1524	0/0:8,0:8:18.02:0,18,409	0/1:14,0:7:0.76:1,0,369	0/0:29,0:21:56.71:0,57,1356	0/0:9,0:9:21.07:0,21,665	0/0:17,0:17:36.58:0,37,995	0/0:39,0:38:76.56:0,77,1807	1/1:2,29:29:86.73:1284,87,0	1/1:24,0:24:12.04:259,12,0	0/1:19,0:19:48.09:97,0,48	1/1:12,0:12:4.64:14,5,0	0/0:22,0:22:33.45:0,33,1385	0/0:27,0:25:53.95:0,54,1396	0/0:31,0:30:66.21:0,66,1745	0/0:30,0:29:65.79:0,66,1719	0/0:20,0:20:36.31:0,36,888	0/0:27,0:26:52.23:0,52,1240	0/0:19,0:18:34.04:0,34,1267	0/0:21,0:20:56.93:0,57,1267	0/0:17,0:17:38.87:0,39,1185	0/0:79,0:79:99:0,159,4043	0/0:20,0:20:57.15:0,57,1482	0/0:12,0:12:18.18:0,18,615	0/0:41,0:41:99:0,103,3553	0/0:20,0:20:39.13:0,39,1126	0/0:34,0:33:83.98:0,84,2273	0/0:19,0:19:51.12:0,51,1217	0/0:18,0:18:42.09:0,42,1088
chr10	65337190	.	GCTCA	G	960.70	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=8.146;DP=688;FS=16.354;HRun=0;HaplotypeScore=142.7764;InbreedingCoeff=0.8507;MQ=55.77;MQ0=5;MQRankSum=-4.458;QD=9.61;ReadPosRankSum=-1.411;VQSLOD=1.7343;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:57.20:0,57,1266	0/0:10,0:10:21.07:0,21,471	0/1:15,0:7:5.26:5,0,324	0/0:32,0:23:53.01:0,53,1247	0/0:8,0:8:21.07:0,21,506	0/0:16,0:16:33.11:0,33,755	0/0:39,0:38:66.11:0,66,1491	1/1:31,0:29:24.67:272,25,0	1/1:23,0:23:12:107,12,0	1/1:5,14:19:39.12:626,39,0	1/1:2,10:12:5.51:103,6,0	0/0:24,0:23:54.16:0,54,1105	0/0:26,0:25:48.16:0,48,1015	0/0:31,0:30:66.06:0,66,1505	0/0:30,0:29:63.22:0,63,1350	0/0:20,0:20:33.52:0,34,687	0/0:26,0:25:48.02:0,48,900	0/0:20,0:19:50.75:0,51,1071	0/0:21,0:20:39.70:0,40,1058	0/0:17,0:17:38.97:0,39,834	0/0:77,0:77:99:0,159,3450	0/0:20,0:20:51.13:0,51,1035	0/0:11,0:11:21.07:0,21,486	0/0:40,0:40:99:0,103,2389	0/0:17,0:17:42.14:0,42,956	0/0:34,0:33:84.28:0,84,1871	0/0:19,0:19:48.16:0,48,1047	0/0:21,0:21:51.14:0,51,1054
chr10	65337317	.	T	TCA	978.17	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.380;DP=798;FS=1.499;HRun=0;HaplotypeScore=143.3987;InbreedingCoeff=0.9890;MQ=62.99;MQ0=8;MQRankSum=-1.781;QD=32.61;ReadPosRankSum=-0.346;VQSLOD=5.4842;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:96.28:0,96,1206	0/0:17,0:17:38.99:0,39,491	0/0:33,0:23:19.80:0,20,389	0/0:38,0:27:48.21:0,48,599	0/0:20,0:20:44.98:0,45,572	0/0:20,0:20:39.11:0,39,496	0/0:27,0:26:66.21:0,66,839	0/0:40,0:39:84.23:0,84,1049	1/1:11,19:26:66.19:1073,66,0	0/0:39,0:39:90.02:0,90,1131	0/0:19,0:19:36.09:0,36,442	0/0:20,0:20:39.16:0,39,527	0/0:23,0:23:51.16:0,51,648	0/0:22,0:22:63.19:0,63,787	0/0:22,0:22:36.11:0,36,458	0/0:18,0:18:33.07:0,33,381	0/0:44,0:44:89.92:0,90,1101	0/0:14,0:14:23.25:0,23,371	0/0:15,0:15:30.10:0,30,382	0/0:18,0:18:45.14:0,45,572	0/0:85,0:84:99:0,175,2146	0/0:28,0:28:77.92:0,78,964	0/0:21,0:21:59.98:0,60,738	0/0:51,0:51:80.26:0,80,1403	0/0:24,0:24:51.12:0,51,607	0/0:33,0:32:71.57:0,72,861	0/0:20,0:20:54.14:0,54,659	0/0:9,0:9:24.08:0,24,305
chr10	65337339	.	ACACACT	A	1076.77	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.598;DP=779;FS=0.000;HRun=0;HaplotypeScore=196.8902;InbreedingCoeff=0.7952;MQ=57.97;MQ0=34;MQRankSum=-3.263;QD=25.64;ReadPosRankSum=-2.399;VQSLOD=2.5678;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:44:99:0,99,3006	0/0:14,0:14:36.10:0,36,994	0/0:37,0:13:22.81:0,23,682	0/0:59,0:23:31.35:0,31,854	0/0:19,0:19:45.15:0,45,1242	0/0:23,0:23:53.21:0,53,1645	0/0:29,0:29:69.10:0,69,2217	0/0:38,0:35:56.04:0,56,660	0/0:21,0:20:1.09:0,1,186	1/1:4,22:26:61.02:1132,61,0	1/1:3,13:16:3.01:53,3,0	0/0:22,0:22:44.78:0,45,960	0/0:17,0:17:48.16:0,48,1534	0/0:25,0:25:54.15:0,54,1557	0/0:27,0:26:54.16:0,54,1577	0/0:23,0:22:48.62:0,49,1341	0/0:43,0:43:65.29:0,65,2874	0/0:14,0:14:29.68:0,30,912	0/0:14,0:13:36.12:0,36,1036	0/0:19,0:19:48.11:0,48,1365	0/0:74,0:71:99:0,165,4896	0/0:27,0:27:75.19:0,75,2009	0/0:20,0:20:51.12:0,51,1459	0/0:48,0:48:99:0,120,3262	0/0:19,0:19:42.09:0,42,1261	0/0:28,0:27:75.26:0,75,2448	0/0:20,0:20:48.14:0,48,1426	0/0:11,0:11:27.09:0,27,876
chr10	65337345	.	TCACA	T	1227.86	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=7.514;DP=779;FS=6.585;HRun=0;HaplotypeScore=171.5198;InbreedingCoeff=0.9246;MQ=57.47;MQ0=46;MQRankSum=-0.555;QD=12.53;ReadPosRankSum=-3.575;VQSLOD=2.3385;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:44:96.31:0,96,2166	0/0:14,0:14:30.10:0,30,602	0/0:39,0:11:21.96:0,22,387	0/0:63,0:20:12.51:0,13,332	0/0:21,0:21:47.73:0,48,839	0/0:25,0:25:56.22:0,56,1148	0/0:28,0:28:69.22:0,69,1486	1/1:17,20:34:40.42:706,40,0	1/1:11,8:17:9.83:281,10,0	1/1:26,0:26:24.53:371,25,0	1/1:15,0:15:2.90:16,3,0	0/0:23,0:23:39.34:0,39,738	0/0:18,0:18:48.16:0,48,1031	0/0:25,0:25:48.16:0,48,1009	0/0:27,0:26:51.65:0,52,1199	0/0:22,0:22:45.15:0,45,1068	0/0:42,0:41:67.87:0,68,1925	0/0:12,0:12:33.09:0,33,608	0/0:14,0:13:34.28:0,34,592	0/0:19,0:19:42.12:0,42,843	0/0:70,0:67:99:0,150,2965	0/0:26,0:26:54.19:0,54,1272	0/0:22,0:22:51.16:0,51,1015	0/0:49,0:49:99:0,114,2259	0/0:19,0:19:39.13:0,39,899	0/0:29,0:28:78.13:0,78,1725	0/0:18,0:18:45.15:0,45,993	0/0:10,0:10:27.09:0,27,574
chr10	65337375	.	T	TCA	4771.79	PASS	AB=0.677;AC=34;AF=0.630;AN=54;BaseQRankSum=-4.645;DP=738;FS=1.022;HRun=0;HaplotypeScore=135.6322;InbreedingCoeff=0.3018;MQ=55.13;MQ0=39;MQRankSum=0.838;QD=8.52;ReadPosRankSum=3.373;VQSLOD=4.6177;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:21,35:55:28.35:402,0,28	0/1:6,5:11:19.42:41,0,19	0/0:21,0:4:6:0,6,53	0/1:33,0:4:7.69:8,0,14	0/0:19,0:24:40.36:0,40,363	0/1:7,17:25:11.77:248,0,12	1/1:14,11:25:6.02:93,6,0	0/0:34,0:29:35.49:0,35,240	1/1:18,0:16:20.67:158,21,0	1/1:30,0:28:40.23:278,40,0	./.	1/1:20,2:22:5.09:368,5,0	0/0:22,0:22:44.54:0,45,383	1/1:8,12:20:12.04:187,12,0	1/1:10,23:32:2.81:241,3,0	0/1:8,16:24:4.58:345,0,5	1/1:15,25:39:9.78:441,10,0	1/1:9,2:11:24:253,24,0	1/1:15,8:22:10.13:241,10,0	0/1:8,18:26:19.62:143,0,20	1/1:25,20:42:11.84:314,12,0	0/1:17,12:29:57.78:77,0,58	0/0:21,0:21:32.99:0,33,315	0/0:39,0:39:68.87:0,69,701	1/1:5,14:20:14.14:313,14,0	1/1:19,13:30:30.37:384,30,0	0/1:10,13:23:31.37:96,0,31	1/1:3,8:12:9.03:140,9,0
chr10	65340565	.	CT	C	1167.13	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.034;DP=652;FS=11.211;HRun=6;HaplotypeScore=62.2554;InbreedingCoeff=0.9989;MQ=77.23;MQ0=0;MQRankSum=-2.130;QD=25.37;ReadPosRankSum=-2.020;VQSLOD=2.3879;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,126,1632	0/0:9,0:9:27.07:0,27,341	0/0:16,0:16:39.05:0,39,443	0/0:19,0:19:42.02:0,42,495	0/0:22,0:22:63.19:0,63,812	0/0:24,0:24:66.21:0,66,868	0/0:22,0:22:57.17:0,57,735	1/1:4,25:29:75.12:773,75,0	1/1:0,17:17:48.12:516,48,0	0/0:24,0:24:72.21:0,72,909	0/0:18,0:18:51.16:0,51,656	0/0:26,0:26:72.20:0,72,916	0/0:25,0:25:72.18:0,72,888	0/0:26,0:26:72.19:0,72,892	0/0:25,0:25:75.19:0,75,916	0/0:27,0:27:69.22:0,69,908	0/0:42,0:42:99:0,120,1546	0/0:27,0:27:81.22:0,81,1031	0/0:23,0:23:69.17:0,69,863	0/0:22,0:22:66.21:0,66,868	0/0:28,0:28:72.23:0,72,947	0/0:24,0:24:66.19:0,66,841	0/0:15,0:15:42.14:0,42,552	0/0:27,0:27:75.16:0,75,936	0/0:15,0:15:42.11:0,42,524	0/0:26,0:26:60.19:0,60,777	0/0:19,0:19:57.18:0,57,736	0/0:9,0:9:27.09:0,27,355
chr10	65342240	.	C	CCCA	1043.03	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-2.085;DP=518;FS=10.494;HRun=0;HaplotypeScore=78.2990;InbreedingCoeff=0.8461;MQ=70.28;MQ0=2;MQRankSum=-2.334;QD=32.59;ReadPosRankSum=-2.320;VQSLOD=2.8694;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:78.23:0,78,1247	0/0:6,0:6:18.06:0,18,304	0/0:26,0:19:48.11:0,48,746	0/0:17,0:10:0.89:0,1,199	0/0:15,0:15:45.14:0,45,733	0/0:21,0:21:60.15:0,60,896	0/0:21,0:21:60.20:0,60,991	1/1:3,16:21:41.99:634,42,0	1/1:2,9:11:24.08:529,24,0	0/0:20,0:20:51.17:0,51,841	0/0:11,0:11:30.09:0,30,482	0/0:25,0:25:75.22:0,75,1189	0/0:21,0:21:60.19:0,60,992	0/0:12,0:12:30.08:0,30,460	0/0:14,0:14:42.10:0,42,611	0/0:13,0:13:36.07:0,36,528	0/0:30,0:30:87.22:0,87,1332	0/0:29,0:29:84.20:0,84,1261	0/0:11,0:11:30.09:0,30,479	0/0:15,0:15:40.67:0,41,643	0/0:25,0:25:72.22:0,72,1135	0/0:14,0:14:42.13:0,42,680	0/0:19,0:19:51.14:0,51,812	0/0:26,0:26:72.22:0,72,1168	0/0:12,0:12:30.05:0,30,479	0/0:22,0:22:66.19:0,66,1051	0/0:29,0:29:87.22:0,87,1314	0/0:5,0:5:6.49:0,6,102
chr10	65343419	.	CTGT	C	300.52	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=3.614;DP=577;FS=9.959;HRun=0;HaplotypeScore=124.4808;InbreedingCoeff=0.8617;MQ=54.91;MQ0=6;MQRankSum=5.821;QD=10.73;ReadPosRankSum=-2.334;VQSLOD=1.9451;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:57.67:0,58,1084	0/0:6,0:6:15.05:0,15,313	0/0:16,0:8:24.08:0,24,461	0/0:20,0:14:27.15:0,27,697	0/0:5,0:5:9.03:0,9,189	0/0:9,0:8:18.02:0,18,299	0/0:41,0:40:99:0,102,1901	0/0:36,0:31:69.17:0,69,982	0/0:38,0:38:99:0,100,1482	1/1:3,15:18:35.50:302,35,0	1/1:3,7:10:17.01:117,17,0	0/0:23,0:23:60.18:0,60,1153	0/0:25,0:25:57.17:0,57,1056	0/0:24,0:24:65.87:0,66,1235	0/0:19,0:19:45.15:0,45,907	0/0:25,0:25:60.18:0,60,1177	0/0:31,0:31:87.30:0,87,1759	0/0:26,0:25:69.18:0,69,1313	0/0:7,0:6:12.04:0,12,210	0/0:3,0:3:6.02:0,6,126	0/0:40,0:40:99:0,102,1777	0/0:9,0:9:18.04:0,18,305	0/0:5,0:5:12.04:0,12,240	0/0:56,0:56:99:0,153,2957	0/0:12,0:12:32.95:0,33,541	0/0:15,0:15:36.06:0,36,649	0/0:27,0:27:78.25:0,78,1479	0/0:9,0:6:11.96:0,12,206
chr10	65344008	.	TAC	T	3654.65	PASS	AB=0.869;AC=35;AF=0.648;AN=54;BaseQRankSum=2.151;DP=795;FS=1.865;HRun=0;HaplotypeScore=147.4985;InbreedingCoeff=0.3908;MQ=51.45;MQ0=31;MQRankSum=-0.715;QD=6.58;ReadPosRankSum=4.295;VQSLOD=2.9556;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:47,12:61:31.45:304,31,0	1/1:8,1:9:11.99:121,12,0	./.	0/0:39,0:30:0:0,0,0	0/0:20,0:17:25.33:0,25,360	1/1:23,3:24:20.94:200,21,0	1/1:25,7:30:25.54:269,26,0	0/0:47,0:35:11.58:0,12,53	0/0:24,0:21:2.37:0,2,10	0/1:14,0:21:25.17:48,0,25	0/0:5,0:4:2.96:0,3,19	1/1:20,7:28:1.42:255,1,0	0/1:21,0:19:67.74:68,0,159	1/1:19,6:22:24.07:250,24,0	1/1:23,5:21:15.04:169,15,0	0/1:21,7:24:16.02:263,0,16	1/1:29,4:34:23.73:248,24,0	0/1:24,5:22:5.95:208,0,6	1/1:17,0:13:3.01:34,3,0	1/1:12,5:17:14.79:121,15,0	1/1:62,10:61:25.55:398,26,0	1/1:17,6:25:7.95:161,8,0	0/0:18,0:18:20.95:0,21,356	0/0:53,0:52:44.73:0,45,909	1/1:14,3:16:11.89:131,12,0	1/1:17,8:21:0.54:185,1,0	1/1:15,3:17:17.92:183,18,0	0/1:5,0:4:13.15:38,0,13
chr10	65344045	.	CAT	C	2052.06	PASS	AB=0.971;AC=21;AF=0.404;AN=52;BaseQRankSum=6.781;DP=873;FS=49.890;HRun=0;HaplotypeScore=200.1979;InbreedingCoeff=-0.3759;MQ=43.17;MQ0=88;MQRankSum=1.252;QD=3.32;ReadPosRankSum=1.326;VQSLOD=1.4539;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:59,2:56:6.82:267,0,7	0/1:11,0:9:6.09:6,0,17	./.	./.	0/0:30,0:25:31.79:0,32,838	0/1:26,1:23:66.79:133,0,67	0/1:35,1:25:20.52:21,0,151	0/0:65,0:36:15.25:0,15,358	1/1:21,0:16:7.66:53,8,0	0/0:36,1:26:32.19:0,32,976	0/0:6,0:4:3.01:0,3,58	0/1:45,1:38:64.48:124,0,64	0/0:20,0:18:49.27:0,49,672	1/1:32,0:28:4:215,4,0	0/1:31,1:25:70.67:71,0,75	0/1:31,0:26:67.89:132,0,68	0/1:36,0:35:44.69:62,0,45	0/1:31,3:27:23.56:270,0,24	0/1:20,0:10:39.13:46,0,39	0/1:16,0:15:45.83:53,0,46	0/1:103,3:92:55.04:285,0,55	0/1:21,3:22:8.57:108,0,9	0/0:22,0:20:41.69:0,42,705	0/0:64,1:61:93.97:0,94,2171	0/1:12,1:12:24.89:40,0,25	0/1:44,0:35:59.95:225,0,60	0/1:17,1:15:15.51:46,0,16	0/1:11,0:10:43.68:51,0,44
chr10	65344047	.	TAC	T	5556.68	PASS	AB=0.696;AC=34;AF=0.630;AN=54;BaseQRankSum=2.350;DP=880;FS=38.548;HRun=0;HaplotypeScore=181.8220;InbreedingCoeff=0.4009;MQ=43.33;MQ0=88;MQRankSum=0.530;QD=8.44;ReadPosRankSum=-2.544;VQSLOD=2.6955;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:42,19:56:68.76:772,69,0	1/1:4,7:9:3.01:37,3,0	./.	0/0:5,0:1:2.98:0,3,21	0/1:28,1:24:16.78:17,0,737	0/1:13,14:24:25.37:178,0,25	1/1:31,7:27:11.58:178,12,0	0/0:65,0:35:14.97:0,15,154	1/1:20,0:16:10.85:68,11,0	0/0:38,0:26:26.98:0,27,887	0/0:6,0:4:3.01:0,3,49	1/1:22,24:38:20.98:244,21,0	0/0:19,0:18:42.03:0,42,602	1/1:11,21:28:33.08:402,33,0	0/1:17,15:25:11.08:191,0,11	0/1:12,20:27:13.04:356,0,13	1/1:14,22:36:16.47:228,16,0	1/1:30,6:29:9.64:480,10,0	1/1:19,3:11:13.30:178,13,0	1/1:11,5:15:18.06:223,18,0	1/1:54,53:94:58.14:720,58,0	0/1:13,12:23:5.70:303,0,6	0/0:20,0:18:35.96:0,36,572	0/0:64,0:60:88.58:0,89,1910	1/1:7,5:11:11.61:137,12,0	1/1:18,25:36:1.06:597,1,0	1/1:4,14:15:11.61:148,12,0	0/1:3,8:10:37.11:99,0,37
chr10	65344055	.	CACACACACCACAT	C	1093.39	PASS	AB=0.896;AC=3;AF=0.054;AN=56;BaseQRankSum=4.358;DP=906;FS=1.719;HRun=0;HaplotypeScore=291.2664;InbreedingCoeff=-0.0528;MQ=43.29;MQ0=91;MQRankSum=-6.885;QD=10.93;ReadPosRankSum=-1.538;VQSLOD=1.5150;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:53:53.58:0,54,2266	0/0:11,0:9:5.81:0,6,193	0/0:19,0:2:5.95:0,6,101	0/0:13,0:1:3.01:0,3,75	0/0:31,0:25:60.19:0,60,2760	0/1:27,0:23:3.98:4,0,493	0/0:37,0:25:24.54:0,25,762	0/1:50,1:29:99:438,0,210	0/1:12,6:17:13.23:743,0,13	0/0:42,0:29:75.26:0,75,3208	0/0:9,0:7:2.44:0,2,194	0/0:48,0:41:37.89:0,38,982	0/0:19,0:18:34:0,34,1734	0/0:30,0:25:33.30:0,33,1130	0/0:34,0:28:28.13:0,28,836	0/0:29,0:24:34.65:0,35,936	0/0:34,0:34:29.32:0,29,753	0/0:35,0:30:22.75:0,23,1901	0/0:23,0:11:24.08:0,24,667	0/0:15,0:13:21:0,21,770	0/0:118,0:103:66.72:0,67,2691	0/0:26,0:24:15.25:0,15,790	0/0:21,0:19:38.98:0,39,1730	0/0:60,0:58:99:0,138,6490	0/0:14,0:12:11.36:0,11,466	0/0:47,0:38:63.11:0,63,2294	0/0:19,0:16:17.66:0,18,588	0/0:13,0:12:21.07:0,21,751
chr10	65344104	.	A	AAC	1482.83	PASS	AB=0.859;AC=5;AF=0.093;AN=54;BaseQRankSum=1.541;DP=1029;FS=2.880;HRun=0;HaplotypeScore=180.3836;InbreedingCoeff=0.4225;MQ=48.99;MQ0=64;MQRankSum=-4.004;QD=8.19;ReadPosRankSum=-3.975;VQSLOD=3.0170;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:51:92.88:0,93,1114	0/0:10,0:9:24.08:0,24,305	0/1:80,0:9:2.37:2,0,129	0/0:91,0:10:13.76:0,14,190	0/0:29,0:29:75.16:0,75,907	0/0:28,0:26:45.11:0,45,555	0/0:46,0:40:99:0,107,1301	0/1:39,5:32:99:467,0,229	0/1:16,13:27:6.25:606,0,6	1/1:24,3:21:33.10:523,33,0	./.	0/0:41,0:39:63.14:0,63,767	0/0:18,0:17:47.74:0,48,581	0/0:28,0:28:51.16:0,51,640	0/0:31,0:28:48.15:0,48,604	0/0:26,0:25:42.13:0,42,527	0/0:35,0:34:45.14:0,45,573	0/0:32,0:29:18.04:0,18,623	0/0:17,0:9:9.03:0,9,115	0/0:22,0:20:54.15:0,54,658	0/0:120,0:119:99:0,186,2291	0/0:26,0:26:53.97:0,54,677	0/0:17,0:17:45.06:0,45,546	0/0:62,0:61:99:0,136,1703	0/0:15,0:14:21.07:0,21,266	0/0:38,0:36:84.71:0,85,1024	0/0:21,0:19:27.05:0,27,303	0/0:26,0:25:57.15:0,57,693
chr10	65344233	.	CAT	C	3506.50	PASS	AB=0.990;AC=25;AF=0.463;AN=54;BaseQRankSum=6.267;DP=887;FS=41.191;HRun=0;HaplotypeScore=189.7163;InbreedingCoeff=-0.5551;MQ=40.21;MQ0=113;MQRankSum=1.310;QD=4.59;ReadPosRankSum=-5.417;VQSLOD=0.0820;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:52,0:39:43.97:146,0,44	0/1:17,0:13:72.52:109,0,73	./.	0/0:23,0:3:5.96:0,6,44	0/0:23,0:20:12.02:0,12,298	0/1:29,1:21:26.54:190,0,27	0/1:51,0:42:99:231,0,152	0/1:75,0:46:66.15:198,0,66	1/1:24,0:21:31.21:163,31,0	0/1:16,0:6:18.20:18,0,23	1/1:19,0:16:12.56:119,13,0	0/1:34,0:27:90.46:124,0,90	0/1:14,0:14:25.71:26,0,166	0/1:28,0:24:23.10:250,0,23	0/1:36,0:29:58.59:279,0,59	0/1:21,1:17:20.24:112,0,20	0/1:30,1:22:6.69:253,0,7	0/1:35,1:31:14.65:240,0,15	0/1:24,0:16:27.71:28,0,162	0/1:25,0:20:51.28:91,0,51	0/1:94,1:82:99:335,0,236	0/1:37,0:32:68.74:153,0,69	0/0:11,0:10:20.38:0,20,239	0/0:54,0:50:58.40:0,58,1109	0/1:22,0:17:9.49:185,0,9	0/1:33,0:20:88.93:89,0,159	0/1:19,0:10:14.02:59,0,14	0/1:20,0:20:99:108,0,112
chr10	65344235	.	TAC	T	2684.38	PASS	AB=0.939;AC=29;AF=0.558;AN=52;BaseQRankSum=-4.058;DP=882;FS=8.057;HRun=0;HaplotypeScore=192.8741;InbreedingCoeff=0.2944;MQ=40.03;MQ0=111;MQRankSum=2.629;QD=4.43;ReadPosRankSum=0.703;VQSLOD=2.3704;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:49,3:39:22.55:94,0,23	0/1:17,1:14:30.21:101,0,30	./.	./.	0/0:20,0:22:4.30:0,4,68	1/1:30,0:21:17.59:160,18,0	1/1:48,2:41:27.89:240,28,0	0/0:76,0:47:14.42:0,14,56	0/0:25,0:22:0.10:0,0,19	0/0:17,0:7:0.47:0,0,1	0/0:19,0:17:2.59:0,3,23	1/1:34,1:27:13.24:121,13,0	0/1:14,0:14:5.52:6,0,227	1/1:26,3:25:24.71:223,25,0	1/1:33,4:30:32.59:268,33,0	1/1:12,9:16:18.04:190,18,0	1/1:27,3:23:1.71:260,2,0	1/1:32,4:32:23.48:242,23,0	1/1:21,2:16:4.94:64,5,0	0/1:22,2:19:0.94:101,0,1	1/1:89,5:80:7.99:321,8,0	0/1:36,1:31:4.21:101,0,4	0/0:11,0:10:8.91:0,9,85	0/0:53,0:51:35.14:0,35,633	1/1:21,1:17:13.73:126,14,0	0/1:32,1:20:44.31:92,0,44	0/0:19,0:10:4.48:0,4,21	0/1:13,1:17:60.64:139,0,61
chr10	65345623	.	C	CTTTT	6515.45	PASS	AB=1.000;AC=39;AF=0.750;AN=52;BaseQRankSum=-1.565;DP=304;FS=5.049;HRun=8;HaplotypeScore=86.0242;InbreedingCoeff=0.8274;MQ=31.14;MQ0=0;MQRankSum=-1.230;QD=26.92;ReadPosRankSum=-0.555;VQSLOD=2.1620;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:9,6:15:21.44:417,21,0	1/1:2,0:2:6.02:110,6,0	./.	./.	0/0:11,0:11:21.04:0,21,315	1/1:5,5:10:26.55:483,27,0	1/1:10,5:15:26.58:561,27,0	1/1:19,9:28:42.58:931,43,0	1/1:9,0:14:20.77:320,21,0	0/0:10,0:10:21.01:0,21,285	0/0:6,0:6:12:0,12,158	1/1:11,4:16:27.76:456,28,0	0/0:13,0:13:16.12:0,16,258	1/1:7,1:7:9.36:111,9,0	1/1:5,3:8:13.40:293,13,0	1/1:6,3:8:15.88:279,16,0	1/1:10,2:11:8.11:95,8,0	1/1:7,6:14:27.07:515,27,0	1/1:16,2:17:24.09:333,24,0	1/1:7,2:11:21.49:316,21,0	1/1:2,0:2:1.25:3,1,0	0/1:3,0:3:0:1,0,0	0/0:7,0:7:15.38:0,15,216	0/0:11,0:11:4.17:0,4,147	1/1:2,3:9:20.99:411,21,0	1/1:14,1:15:9.37:140,9,0	1/1:16,4:20:27.74:479,28,0	1/1:5,2:6:15.46:263,15,0
chr10	65345731	.	G	GC	11334.20	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=3.544;DP=447;FS=10.774;HRun=4;HaplotypeScore=58.8244;InbreedingCoeff=0.9680;MQ=74.55;MQ0=0;MQRankSum=-3.600;QD=34.66;ReadPosRankSum=2.023;VQSLOD=4.9325;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,31:33:81.27:1108,81,0	1/1:0,4:4:6.02:82,6,0	0/0:11,0:11:21.04:0,21,237	0/0:11,0:10:20.27:0,20,203	0/0:14,0:14:42.12:0,42,476	1/1:0,15:15:39.13:533,39,0	1/1:5,28:33:81.27:1107,81,0	1/1:2,15:17:42.11:541,42,0	1/1:2,14:16:36.12:492,36,0	0/0:10,0:10:27.08:0,27,306	0/0:14,0:14:39.08:0,39,422	1/1:1,16:17:45.15:615,45,0	0/0:11,0:11:21.06:0,21,238	1/1:0,11:11:27.05:348,27,0	1/1:0,13:13:36.08:471,36,0	1/1:2,10:12:30.10:410,30,0	1/1:1,21:22:60.20:821,60,0	1/1:1,18:19:48.16:657,48,0	1/1:0,10:10:27.09:369,27,0	1/1:0,11:11:33.07:430,33,0	1/1:2,30:32:81.27:1108,81,0	1/1:0,6:6:18.06:245,18,0	0/0:14,0:14:42.12:0,42,476	0/0:33,0:34:93.26:0,93,1055	1/1:2,14:16:42.14:574,42,0	1/1:2,17:19:20.10:643,20,0	1/1:0,18:18:48.16:657,48,0	1/1:0,3:3:9.03:123,9,0
chr10	65345913	.	CG	C	996.95	PASS	AB=0.885;AC=9;AF=0.167;AN=54;BaseQRankSum=3.691;DP=370;FS=6.842;HRun=10;HaplotypeScore=60.1156;InbreedingCoeff=0.7070;MQ=75.12;MQ0=0;MQRankSum=-2.109;QD=11.08;ReadPosRankSum=2.881;VQSLOD=2.6670;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:12.92:0,13,134	0/0:2,0:2:3.01:0,3,33	0/0:23,0:15:13.58:0,14,184	0/0:16,0:13:10.96:0,11,83	./.	0/0:12,0:12:18.01:0,18,186	0/0:21,0:20:42.12:0,42,411	1/1:3,0:16:19.69:58,20,0	1/1:3,25:28:71.98:624,72,0	1/1:3,9:11:26.99:234,27,0	1/1:3,8:11:23.99:208,24,0	0/0:13,1:14:0.49:0,0,207	0/0:10,0:10:22.17:0,22,195	0/0:12,0:12:24.03:0,24,252	0/0:13,0:13:28.29:0,28,279	0/0:9,1:9:23.91:0,24,219	0/0:24,1:25:34.15:0,34,582	0/0:16,0:16:35.66:0,36,394	0/0:9,0:9:18.05:0,18,196	0/0:10,0:11:6:0,6,58	0/1:20,3:23:32.60:33,0,326	0/0:6,0:6:12.03:0,12,130	0/0:5,0:5:9.01:0,9,91	0/0:23,0:23:51.38:0,51,518	0/0:8,0:8:21.05:0,21,224	0/0:8,0:8:13.27:0,13,128	0/0:12,0:12:22.56:0,23,339	0/0:14,0:14:24.06:0,24,266
chr10	65346042	.	C	CAATCAG	6626.49	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-7.999;DP=464;FS=2.312;HRun=0;HaplotypeScore=98.0129;InbreedingCoeff=0.8880;MQ=84.70;MQ0=0;MQRankSum=-12.256;QD=94.66;ReadPosRankSum=-2.874;VQSLOD=6.0930;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:81.26:0,81,1888	0/0:1,0:1:3.01:0,3,72	0/0:13,0:14:38.16:0,38,742	0/0:23,0:23:57.20:0,57,1330	0/0:4,0:4:8.99:0,9,216	0/0:14,0:14:42.14:0,42,1009	0/0:23,0:23:69.24:0,69,1637	1/1:7,17:25:71.12:2485,71,0	1/1:4,17:23:63.22:2223,63,0	1/1:3,13:15:45.15:1595,45,0	1/1:2,4:6:9.03:323,9,0	0/0:16,0:16:45.14:0,45,1010	0/0:14,0:14:39.13:0,39,937	0/0:19,0:19:54.19:0,54,1299	0/0:10,0:10:27.08:0,27,600	0/0:15,0:15:45.15:0,45,1076	0/0:22,0:22:66.23:0,66,1558	0/0:28,0:28:84.29:0,84,1996	0/0:10,0:10:27.09:0,27,646	0/0:8,0:8:18.06:0,18,400	0/0:52,0:52:99:0,150,3464	0/0:15,0:15:45.15:0,45,996	0/0:7,0:7:21.07:0,21,505	0/0:31,0:31:93.32:0,93,2236	0/0:5,0:5:15.05:0,15,353	0/0:13,0:13:39.12:0,39,847	0/0:19,0:19:57.20:0,57,1371	0/0:4,0:4:6.02:0,6,144
chr10	65347814	.	T	TA	7698.40	PASS	AB=0.570;AC=34;AF=0.607;AN=56;BaseQRankSum=-12.770;DP=529;FS=2.189;HRun=9;HaplotypeScore=58.1360;InbreedingCoeff=0.8946;MQ=76.80;MQ0=2;MQRankSum=-0.614;QD=24.13;ReadPosRankSum=3.579;VQSLOD=5.6925;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,21:25:49.68:534,50,0	0/1:3,6:10:5.17:159,0,5	0/0:22,0:16:19.79:0,20,135	0/0:26,0:19:17.16:0,17,132	0/0:25,0:25:35.56:0,36,466	1/1:2,10:12:29.75:310,30,0	0/1:4,16:21:1.14:428,0,1	0/0:33,0:33:80.96:0,81,703	0/0:16,0:16:44.95:0,45,384	0/0:17,0:17:41.99:0,42,364	0/0:23,0:23:65.90:0,66,562	1/1:2,16:18:42.11:465,42,0	0/0:15,0:15:32.98:0,33,286	1/1:2,9:11:24.05:255,24,0	1/1:2,13:15:27.07:298,27,0	1/1:1,10:11:24.06:266,24,0	1/1:3,25:28:69.19:763,69,0	1/1:0,19:19:57.15:630,57,0	1/1:5,20:26:60.14:649,60,0	1/1:6,22:28:60.11:644,60,0	1/1:1,7:8:21.06:232,21,0	1/1:0,12:12:36.10:398,36,0	0/0:19,0:19:50.99:0,51,443	0/0:14,0:14:38.99:0,39,338	1/1:5,16:21:30.08:332,30,0	1/1:4,15:19:22.07:472,22,0	1/1:4,21:25:54.15:597,54,0	1/1:2,8:10:24.06:266,24,0
chr10	65348233	.	A	AACAC	569.35	PASS	AB=0.595;AC=3;AF=0.054;AN=56;BaseQRankSum=5.108;DP=742;FS=4.542;HRun=0;HaplotypeScore=114.5318;InbreedingCoeff=0.5903;MQ=56.87;MQ0=18;MQRankSum=-1.912;QD=12.11;ReadPosRankSum=-3.761;VQSLOD=2.2820;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:72.25:0,72,1217	0/0:7,0:7:18.06:0,18,284	0/0:50,0:4:5.85:0,6,65	0/0:53,0:12:20.98:0,21,267	0/0:19,0:19:48.14:0,48,732	0/0:11,0:11:18.06:0,18,307	0/0:30,0:30:66.20:0,66,1020	0/1:8,0:24:99:142,0,100	1/1:1,19:22:24.55:532,25,0	0/0:26,0:26:57.18:0,57,932	0/0:14,0:13:26.93:0,27,445	0/0:18,0:18:48.15:0,48,785	0/0:14,0:14:33.11:0,33,529	0/0:19,0:18:48.15:0,48,768	0/0:13,0:13:36.12:0,36,590	0/0:19,0:21:54.18:0,54,858	0/0:40,0:42:99:0,101,1607	0/0:32,0:33:85.10:0,85,1353	0/0:22,0:21:53.96:0,54,693	0/0:20,0:21:36.12:0,36,568	0/0:84,0:85:99:0,205,3314	0/0:15,0:15:33.11:0,33,555	0/0:16,0:16:36.12:0,36,587	0/0:57,0:56:99:0,138,2263	0/0:17,0:17:48.16:0,48,785	0/0:28,0:28:71.45:0,71,1134	0/0:14,0:15:39.10:0,39,585	0/0:14,0:14:36.12:0,36,614
chr10	65350760	.	TCCACAG	T	17312.22	PASS	AB=0.528;AC=35;AF=0.625;AN=56;BaseQRankSum=12.168;DP=574;FS=33.056;HRun=0;HaplotypeScore=148.1030;InbreedingCoeff=0.9213;MQ=80.74;MQ0=0;MQRankSum=-16.879;QD=49.75;ReadPosRankSum=5.122;VQSLOD=3.0946;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,28:36:57.20:1360,57,0	1/1:0,11:11:30.10:721,30,0	0/0:27,0:27:71.83:0,72,2198	0/0:20,0:20:39.90:0,40,1551	0/0:19,0:19:54.66:0,55,1775	1/1:3,14:17:42.14:1008,42,0	1/1:2,27:29:69.24:1653,69,0	0/0:25,0:25:66.22:0,66,1987	0/0:17,0:17:48.16:0,48,1683	0/0:27,0:27:72.02:0,72,2280	0/0:13,0:13:39.13:0,39,1241	1/1:1,21:22:57.20:1361,57,0	0/0:13,0:13:39.13:0,39,1387	1/1:3,15:18:39.13:936,39,0	1/1:0,19:19:42.14:1008,42,0	1/1:0,11:11:30.10:721,30,0	1/1:4,23:27:51.65:1225,52,0	1/1:3,11:14:21.07:505,21,0	1/1:4,18:22:48.15:1105,48,0	1/1:2,9:10:24.08:576,24,0	1/1:4,16:19:18.06:431,18,0	1/1:3,17:20:39.13:931,39,0	0/0:23,0:23:69.22:0,69,2204	0/0:42,0:42:99:0,123,4368	1/1:1,16:18:36.59:865,37,0	0/1:2,17:19:99:1104,0,125	1/1:3,20:24:51.10:1225,51,0	1/1:0,10:10:24.08:576,24,0
chr10	65350942	.	AAC	A	1549.93	PASS	AB=0.940;AC=43;AF=0.827;AN=52;BaseQRankSum=4.440;DP=526;FS=3.404;HRun=0;HaplotypeScore=73.1927;InbreedingCoeff=0.2430;MQ=61.50;MQ0=15;MQRankSum=0.441;QD=3.58;ReadPosRankSum=0.383;VQSLOD=1.5200;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:27:11.73:92,12,0	1/1:5,0:6:5.85:46,6,0	./.	./.	1/1:6,0:11:14.11:68,14,0	1/1:11,5:17:5.68:46,6,0	1/1:23,5:29:8.52:60,9,0	0/1:22,0:22:0:0,0,0	1/1:23,0:27:17.23:90,17,0	0/0:27,0:32:29.59:0,30,310	0/0:10,0:10:9.01:0,9,95	1/1:8,3:12:5.85:46,6,0	1/1:8,3:11:5.70:64,6,0	1/1:9,3:13:11.86:111,12,0	1/1:13,4:17:9.02:97,9,0	1/1:10,5:17:17.79:149,18,0	1/1:20,6:27:17.88:175,18,0	1/1:10,4:15:11.86:111,12,0	0/1:20,0:21:6.13:37,0,6	1/1:14,2:16:9.02:97,9,0	1/1:20,8:27:5.84:64,6,0	1/1:17,1:19:8.84:70,9,0	0/1:8,0:8:25.37:25,0,38	0/1:31,2:34:13.33:13,0,320	1/1:9,1:11:5.85:46,6,0	0/1:19,5:24:7.96:85,0,8	1/1:12,6:17:5.16:63,5,0	1/1:2,1:3:3.01:32,3,0
chr10	65352982	.	A	AT	2436.94	PASS	AB=0.923;AC=7;AF=0.125;AN=56;BaseQRankSum=-6.732;DP=841;FS=2.505;HRun=9;HaplotypeScore=106.7673;InbreedingCoeff=0.8333;MQ=66.58;MQ0=1;MQRankSum=0.082;QD=17.28;ReadPosRankSum=-0.602;VQSLOD=3.1818;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:69,0:70:99:0,200,1725	0/0:18,0:18:50.96:0,51,437	0/0:16,0:16:26.77:0,27,222	0/0:13,0:13:14.98:0,15,128	0/0:34,0:34:80.95:0,81,702	0/0:18,0:18:50.98:0,51,442	0/0:25,0:25:65.97:0,66,573	0/0:40,0:40:95.96:0,96,833	1/1:6,33:40:61.89:881,62,0	1/1:9,25:34:77.24:832,77,0	1/1:6,25:31:82.36:854,82,0	0/0:22,0:22:59.98:0,60,521	0/0:21,0:21:50.98:0,51,443	0/0:26,0:26:74.95:0,75,646	0/0:25,0:25:65.96:0,66,568	0/0:36,0:36:89.95:0,90,781	0/0:35,0:35:92.98:0,93,807	0/0:21,1:22:23.80:0,24,436	0/0:29,0:29:52.97:0,53,486	0/0:31,0:31:83.93:0,84,719	0/0:36,0:36:95.96:0,96,830	0/0:51,0:51:99:0,144,1248	0/0:26,2:27:35.79:0,36,540	0/0:39,0:39:99:0,102,878	0/0:23,0:23:56.92:0,57,488	0/1:33,3:36:18.59:19,0,544	0/0:26,0:26:76.99:0,77,650	0/0:15,0:15:44.99:0,45,390
chr10	65353537	.	C	CAG	8001.64	PASS	AB=0.697;AC=30;AF=0.536;AN=56;BaseQRankSum=-12.152;DP=713;FS=0.407;HRun=0;HaplotypeScore=97.7491;InbreedingCoeff=-0.0817;MQ=66.09;MQ0=8;MQRankSum=-0.010;QD=14.79;ReadPosRankSum=2.433;VQSLOD=4.8851;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:26,17:48:99:584,0,252	1/1:4,3:8:1:87,1,0	0/0:51,0:27:9.11:0,9,85	0/1:54,0:26:14.40:14,0,41	0/0:22,0:25:20.43:0,20,530	1/1:5,12:17:33.10:496,33,0	1/1:7,16:26:2.02:656,2,0	0/0:31,0:33:38.88:0,39,399	0/1:6,10:18:0.98:346,0,1	1/1:15,0:15:9.22:40,9,0	1/1:13,0:13:1.77:5,2,0	1/1:7,17:24:0.98:482,1,0	0/0:20,0:20:26.29:0,26,287	1/1:6,11:18:24.08:375,24,0	0/1:11,13:22:33.52:434,0,34	0/1:13,15:28:97.87:428,0,98	0/1:16,15:31:99:639,0,167	0/1:12,8:21:99:275,0,107	0/1:18,3:21:16.98:186,0,17	0/1:6,9:16:45.91:258,0,46	0/1:21,29:52:99:859,0,152	0/1:10,8:21:99:202,0,156	0/0:13,0:16:29.73:0,30,308	0/0:27,0:27:66.13:0,66,733	0/1:9,8:17:95.24:252,0,95	0/1:8,16:26:4.92:609,0,5	0/1:16,15:33:35.10:564,0,35	1/1:2,4:6:15.02:210,15,0
chr10	65353922	.	C	CA	2602.80	PASS	AB=0.941;AC=7;AF=0.125;AN=56;BaseQRankSum=-3.985;DP=581;FS=29.245;HRun=0;HaplotypeScore=89.9514;InbreedingCoeff=0.8437;MQ=85.51;MQ0=0;MQRankSum=-2.276;QD=31.36;ReadPosRankSum=1.848;VQSLOD=2.0566;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:95.14:0,95,1204	0/0:14,0:14:33.02:0,33,412	0/0:26,0:26:67.96:0,68,799	0/0:23,0:23:35.54:0,36,610	0/0:16,0:16:39.13:0,39,541	0/0:22,0:22:39.12:0,39,529	0/0:20,0:20:38.91:0,39,502	0/0:26,0:26:58.64:0,59,696	1/1:0,31:31:84.29:1341,84,0	1/1:3,18:21:54.18:838,54,0	1/1:0,15:15:36.12:560,36,0	0/0:14,0:14:30.10:0,30,411	0/0:22,0:22:38.36:0,38,542	0/0:15,0:15:26.86:0,27,311	0/0:19,0:19:27.97:0,28,362	0/0:24,0:24:34.18:0,34,549	0/0:24,0:24:64.63:0,65,819	0/0:19,0:19:39.13:0,39,539	0/0:31,0:31:69.43:0,69,874	0/0:17,0:16:33.11:0,33,459	0/0:23,0:23:35.48:0,35,469	0/0:20,0:20:39.10:0,39,508	0/0:20,0:20:33.11:0,33,459	0/0:12,0:11:25.38:0,25,331	0/0:18,0:18:33.04:0,33,432	0/1:15,1:15:11.85:12,0,376	0/0:21,0:20:32.98:0,33,434	0/0:11,0:11:30.09:0,30,393
chr10	65354379	.	C	CA	1746.03	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=-5.939;DP=669;FS=16.968;HRun=9;HaplotypeScore=83.8298;InbreedingCoeff=0.7957;MQ=74.87;MQ0=2;MQRankSum=0.987;QD=16.17;ReadPosRankSum=-3.498;VQSLOD=1.7958;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:37:85.65:0,86,729	0/0:12,0:12:32.99:0,33,286	0/0:37,0:30:3.88:0,4,307	0/1:38,0:27:33.16:33,0,166	0/0:29,0:29:71.96:0,72,625	0/0:21,0:21:53.98:0,54,469	0/0:11,0:11:26.98:0,27,234	0/0:46,0:46:99:0,114,989	1/1:4,15:19:39.11:431,39,0	1/1:4,24:28:69.16:747,69,0	1/1:1,22:23:63.13:683,63,0	0/0:17,0:17:44.99:0,45,391	0/0:15,0:15:38.99:0,39,338	0/0:15,0:15:35.97:0,36,309	0/0:20,0:20:50.97:0,51,439	0/0:17,0:17:47.99:0,48,416	0/0:35,0:35:92.98:0,93,807	0/0:32,0:32:41.12:0,41,567	0/0:22,1:23:32.79:0,33,511	0/0:24,0:24:59.98:0,60,521	0/0:12,0:12:26.99:0,27,234	0/0:22,0:22:53.97:0,54,469	0/0:19,0:19:50.99:0,51,443	0/0:18,0:18:53.97:0,54,465	0/0:38,0:37:99:0,108,937	0/0:23,1:23:32.79:0,33,511	0/0:19,0:19:53.99:0,54,468	0/0:17,0:17:50.99:0,51,442
chr10	65354460	.	GA	G	14529.94	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=11.782;DP=637;FS=5.675;HRun=2;HaplotypeScore=61.3152;InbreedingCoeff=1.0000;MQ=84.62;MQ0=0;MQRankSum=-5.874;QD=35.44;ReadPosRankSum=6.160;VQSLOD=4.8593;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,39:40:99:1402,108,0	1/1:0,16:16:45.15:584,45,0	0/0:30,0:30:90.28:0,90,1292	0/0:19,0:19:54.16:0,54,787	0/0:25,0:25:72.23:0,72,1059	1/1:0,17:17:51.17:662,51,0	1/1:0,25:25:75.24:974,75,0	0/0:38,0:38:99:0,114,1708	0/0:16,0:16:42.14:0,42,629	0/0:22,0:22:63.21:0,63,926	0/0:19,0:19:54.17:0,54,808	1/1:1,14:15:44.36:552,44,0	0/0:13,0:13:39.12:0,39,562	1/1:0,14:14:42.14:545,42,0	1/1:0,20:20:54.18:701,54,0	1/1:0,15:15:42.14:545,42,0	1/1:0,39:39:99:1402,108,0	1/1:0,18:18:48.16:623,48,0	1/1:0,23:23:69.21:878,69,0	1/1:1,23:24:66.17:838,66,0	1/1:3,17:20:42.14:545,42,0	1/1:0,23:23:63.20:818,63,0	0/0:19,0:19:54.18:0,54,809	0/0:26,0:26:78.26:0,78,1169	1/1:1,24:25:60.19:779,60,0	1/1:1,29:30:45.32:1084,45,0	1/1:0,23:23:60.19:778,60,0	1/1:0,23:23:63.20:816,63,0
chr10	65357740	.	G	GACAC	3191.09	PASS	AB=0.709;AC=33;AF=0.589;AN=56;BaseQRankSum=4.477;DP=564;FS=9.456;HRun=0;HaplotypeScore=125.9980;InbreedingCoeff=0.3575;MQ=77.37;MQ0=7;MQRankSum=-5.738;QD=8.51;ReadPosRankSum=-2.124;VQSLOD=1.7642;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,15:26:2.34:195,2,0	1/1:10,0:10:12.87:123,13,0	0/0:36,0:23:62.32:0,62,921	0/0:35,0:24:65.38:0,65,897	0/0:18,0:18:36.02:0,36,623	0/1:18,0:18:10.76:141,0,11	0/1:18,16:38:51.32:76,0,51	1/1:15,0:15:7.63:75,8,0	0/1:10,0:21:48.03:48,0,50	0/0:2,0:18:14.84:0,15,126	0/0:0,0:10:11.99:0,12,101	1/1:7,11:16:3.01:70,3,0	0/0:14,0:14:42.11:0,42,640	0/1:4,9:16:18.29:152,0,18	1/1:4,10:15:6.75:207,7,0	0/1:8,16:31:3.72:456,0,4	1/1:22,6:29:39.28:651,39,0	1/1:4,10:16:4.42:74,4,0	1/1:8,4:11:15.01:227,15,0	1/1:4,5:11:6.02:141,6,0	1/1:14,13:36:2.49:22,2,0	1/1:3,8:13:8.50:211,9,0	0/0:21,0:21:54.14:0,54,864	0/0:37,0:37:91.91:0,92,1570	0/1:6,4:11:41.17:59,0,41	1/1:13,0:13:23.88:250,24,0	1/1:16,0:17:6.59:81,7,0	0/1:7,1:9:11.46:121,0,11
chr10	65357744	.	G	GACAC	3897.77	PASS	AB=1.000;AC=36;AF=0.667;AN=54;BaseQRankSum=1.732;DP=588;FS=2.054;HRun=0;HaplotypeScore=132.9379;InbreedingCoeff=0.4733;MQ=71.25;MQ0=12;MQRankSum=-0.418;QD=9.13;ReadPosRankSum=-3.505;VQSLOD=1.9952;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:31,0:30:23.52:327,24,0	1/1:9,0:9:14.92:138,15,0	0/1:31,0:18:0:0,0,0	./.	0/0:5,0:17:20.92:0,21,196	0/1:15,0:15:3.25:167,0,3	0/1:36,0:36:47.57:83,0,48	1/1:14,0:14:0.47:3,0,0	0/1:23,0:23:37.32:113,0,37	0/0:17,0:17:15.49:0,15,140	0/0:10,0:10:12.01:0,12,112	1/1:18,0:16:6.01:95,6,0	0/0:18,0:19:29.33:0,29,342	1/1:18,0:18:15:214,15,0	1/1:17,0:17:9.03:212,9,0	0/1:29,0:29:1.50:472,0,2	1/1:30,0:29:42.41:676,42,0	1/1:13,0:13:3.01:71,3,0	1/1:14,0:13:20.74:258,21,0	1/1:13,0:13:6.02:141,6,0	1/1:40,0:38:5.98:47,6,0	1/1:14,0:14:12.02:236,12,0	0/0:20,0:20:18.06:0,18,282	0/0:39,0:41:63.73:0,64,881	1/1:12,0:12:6:94,6,0	1/1:15,0:15:29.35:286,29,0	1/1:10,14:27:6.56:125,7,0	0/1:8,0:8:10.12:141,0,10
chr10	65358554	.	G	GTT	7857.80	PASS	AB=0.732;AC=43;AF=0.768;AN=56;BaseQRankSum=0.072;DP=514;FS=10.046;HRun=12;HaplotypeScore=90.3617;InbreedingCoeff=0.6734;MQ=66.96;MQ0=4;MQRankSum=-4.035;QD=19.45;ReadPosRankSum=-0.788;VQSLOD=3.1433;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:16,12:29:62.94:685,63,0	1/1:3,0:6:12:108,12,0	0/0:18,0:11:10.04:0,10,85	0/1:14,0:13:12.12:12,0,51	0/0:18,0:20:41.60:0,42,419	1/1:9,13:24:35.42:408,35,0	1/1:13,6:20:32.55:337,33,0	0/1:6,1:23:14.12:129,0,14	1/1:4,0:6:14.86:138,15,0	0/1:6,0:15:36.47:41,0,36	1/1:9,1:21:11.01:204,11,0	1/1:8,1:10:20.49:213,20,0	0/0:22,0:24:31.66:0,32,316	1/1:5,2:8:14.20:140,14,0	1/1:4,5:10:16.60:201,17,0	1/1:3,10:14:26.58:341,27,0	1/1:9,10:21:43.44:497,43,0	1/1:11,8:25:55.04:569,55,0	1/1:14,4:22:50.50:539,51,0	1/1:15,12:27:63.23:741,63,0	1/1:2,14:17:32.08:396,32,0	1/1:5,4:7:21.02:253,21,0	0/0:22,0:23:26.96:0,27,363	0/0:24,0:23:52.77:0,53,450	1/1:12,11:24:54.06:655,54,0	1/1:17,5:24:61.30:671,61,0	1/1:11,6:19:36.54:411,37,0	1/1:5,3:8:12.04:168,12,0
chr10	65358651	.	A	AC	12426.20	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=10.198;DP=478;FS=0.393;HRun=3;HaplotypeScore=69.4621;InbreedingCoeff=0.9975;MQ=67.06;MQ0=4;MQRankSum=-1.457;QD=36.33;ReadPosRankSum=3.491;VQSLOD=5.3898;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,27:28:69.23:966,69,0	1/1:0,8:8:21.07:294,21,0	0/0:14,0:11:29.56:0,30,316	0/0:15,0:10:23.90:0,24,266	0/0:26,0:26:78.18:0,78,906	1/1:0,18:18:54.18:756,54,0	1/1:1,22:23:51.17:713,51,0	0/0:18,0:17:48.14:0,48,566	1/1:0,17:17:48.16:672,48,0	1/1:0,10:10:30.10:418,30,0	1/1:1,22:23:57.10:771,57,0	1/1:1,15:16:39.09:524,39,0	0/0:23,0:23:66.20:0,66,789	1/1:1,9:10:24.08:336,24,0	1/1:0,12:12:36.12:504,36,0	1/1:1,9:10:27.09:378,27,0	1/1:0,26:26:75.16:1021,75,0	1/1:2,21:23:48.16:672,48,0	1/1:0,10:10:30.10:414,30,0	1/1:1,17:19:54.18:735,54,0	1/1:0,12:12:30.10:420,30,0	1/1:1,12:13:30.10:420,30,0	0/0:19,0:19:57.17:0,57,684	0/0:20,0:20:51.16:0,51,611	1/1:1,12:13:30.10:419,30,0	1/1:1,21:22:60.17:819,60,0	1/1:1,19:20:57.19:798,57,0	1/1:0,9:9:27.09:378,27,0
chr10	65359571	.	GCA	G	492.23	PASS	AB=0.897;AC=16;AF=0.308;AN=52;BaseQRankSum=2.600;DP=497;FS=3.807;HRun=0;HaplotypeScore=82.2421;InbreedingCoeff=-0.2517;MQ=58.54;MQ0=12;MQRankSum=0.768;QD=1.50;ReadPosRankSum=1.400;VQSLOD=1.3419;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:23,1:24:23.82:24,0,62	0/0:7,0:7:3.01:0,3,37	./.	0/1:29,0:17:0:0,0,0	0/0:9,0:12:9.94:0,10,97	0/0:10,0:10:5.38:0,5,43	0/1:27,4:31:65.18:65,0,215	0/0:16,0:15:11.92:0,12,117	1/1:16,7:24:14.87:144,15,0	0/0:10,0:10:5.79:0,6,30	0/0:6,0:7:5.99:0,6,49	0/1:15,1:16:12.35:12,0,157	0/0:9,0:9:9.03:0,9,129	0/0:20,0:19:21.06:0,21,255	0/0:13,0:13:9.03:0,9,102	0/1:5,2:6:31.96:32,0,83	0/1:26,2:28:38.48:38,0,251	0/1:22,2:24:11.76:12,0,192	0/1:14,0:14:2.91:3,0,47	0/1:11,2:13:16.74:17,0,70	0/1:50,6:54:99:145,0,277	0/1:9,2:11:24.59:57,0,25	./.	0/0:23,0:21:24.08:0,24,351	0/0:15,0:14:14.83:0,15,148	0/1:20,2:22:49.92:50,0,53	0/1:10,2:12:18.24:18,0,83	0/1:12,1:13:20.79:21,0,92
chr10	65359573	.	A	ACG	2900.07	PASS	AB=0.967;AC=25;AF=0.446;AN=56;BaseQRankSum=-5.896;DP=505;FS=8.409;HRun=0;HaplotypeScore=76.5846;InbreedingCoeff=-0.0042;MQ=54.73;MQ0=13;MQRankSum=3.542;QD=8.06;ReadPosRankSum=0.834;VQSLOD=2.0458;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:23:47.81:335,48,0	0/1:8,0:8:25.32:28,0,25	0/0:18,0:8:22.48:0,22,185	0/0:29,0:15:32.07:0,32,306	0/1:11,0:11:7.66:8,0,78	0/1:3,7:10:2.86:9,0,3	1/1:33,0:33:2.17:353,2,0	0/0:17,0:15:40.56:0,41,334	0/0:24,0:24:53.73:0,54,413	0/0:9,0:9:1.23:0,1,104	0/0:7,0:6:11.23:0,11,97	0/1:16,0:16:47.71:127,0,48	0/0:9,0:9:24.01:0,24,252	0/1:20,0:19:26.04:167,0,26	1/1:14,0:14:2.23:148,2,0	0/1:8,0:6:9.81:10,0,36	0/1:31,0:30:77.43:243,0,77	0/1:25,0:25:4.49:283,0,4	0/1:17,0:16:19.80:113,0,20	0/1:13,0:13:17.92:42,0,18	0/1:57,1:56:26.33:500,0,26	1/1:11,0:10:7.72:70,8,0	0/0:8,0:7:14.94:0,15,118	0/0:24,0:22:62.99:0,63,654	0/1:15,0:14:16.55:108,0,17	1/1:22,0:22:14.87:334,15,0	0/1:12,0:12:21.34:62,0,21	1/1:13,0:13:2.80:131,3,0
chr10	65359842	.	CTG	C	954.72	PASS	AB=0.949;AC=23;AF=0.411;AN=56;BaseQRankSum=2.240;DP=501;FS=10.487;HRun=0;HaplotypeScore=105.0999;InbreedingCoeff=0.2821;MQ=52.39;MQ0=16;MQRankSum=4.383;QD=3.99;ReadPosRankSum=-0.534;VQSLOD=1.2720;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:27:1.90:0,2,43	1/1:4,0:4:2.91:23,3,0	0/0:14,0:6:13.29:0,13,187	0/0:27,0:9:8.94:0,9,101	0/1:11,0:11:14.65:15,0,85	0/1:18,0:18:0:0,0,0	0/1:20,2:20:3:118,0,3	0/0:17,0:18:35.17:0,35,394	0/0:10,0:14:5.84:0,6,42	0/1:11,0:9:15.19:30,0,15	0/0:15,0:14:5.93:0,6,40	0/1:18,0:18:4.72:114,0,5	0/0:14,0:13:21.05:0,21,285	1/1:15,0:13:6:60,6,0	1/1:14,2:14:11.44:117,11,0	0/1:20,0:18:0:0,0,0	0/0:22,0:21:9.38:0,9,65	0/0:19,0:19:14.88:0,15,115	0/1:13,0:12:50.21:92,0,50	1/1:9,5:13:4.22:45,4,0	0/1:17,3:20:31.74:207,0,32	1/1:11,2:12:8.98:72,9,0	0/0:13,0:12:12.04:0,12,176	0/0:47,0:44:43.17:0,43,1105	1/1:13,1:13:14.86:109,15,0	0/1:15,7:22:83.98:84,0,149	0/0:27,0:26:4.03:0,4,14	1/1:8,0:7:3.01:34,3,0
chr10	65359844	.	G	GTC	2332.24	PASS	AB=0.853;AC=24;AF=0.429;AN=56;BaseQRankSum=-0.097;DP=511;FS=34.266;HRun=0;HaplotypeScore=100.4328;InbreedingCoeff=-0.2952;MQ=52.53;MQ0=17;MQRankSum=-0.266;QD=6.37;ReadPosRankSum=0.757;VQSLOD=1.5701;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:8,22:30:31.90:105,0,32	0/1:4,0:4:12.53:40,0,13	0/0:14,0:6:15.72:0,16,193	0/0:27,0:9:8.58:0,9,89	0/0:11,0:11:13:0,13,159	0/1:8,10:19:5.94:6,0,35	0/1:23,0:21:13.66:275,0,14	0/1:19,0:18:89.53:90,0,163	0/1:17,0:14:6.88:22,0,7	0/1:11,0:10:35.15:117,0,35	0/1:7,7:15:4.21:4,0,11	1/1:18,0:18:20.92:269,21,0	0/0:14,0:13:26.33:0,26,320	0/1:13,0:11:7.36:51,0,7	0/1:13,2:13:9.76:106,0,10	0/0:7,11:16:5.89:0,6,39	0/1:7,14:22:36.04:38,0,36	0/1:10,11:21:38.38:38,0,71	0/1:16,0:14:14.61:199,0,15	0/1:14,0:13:41.85:83,0,42	0/1:19,1:21:54.61:367,0,55	1/1:11,1:11:7.27:143,7,0	0/0:14,0:13:20.99:0,21,231	0/0:47,0:44:99:0,102,1304	0/1:12,0:11:14.68:206,0,15	0/1:22,1:23:64.57:280,0,65	0/1:9,19:29:14.01:14,0,97	1/1:2,5:6:3.01:44,3,0
chr10	65360311	.	GTT	G	4399.43	PASS	AB=0.573;AC=34;AF=0.607;AN=56;BaseQRankSum=-6.727;DP=511;FS=3.186;HRun=15;HaplotypeScore=70.6520;InbreedingCoeff=0.7768;MQ=66.52;MQ0=11;MQRankSum=-0.045;QD=13.79;ReadPosRankSum=4.384;VQSLOD=4.1724;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,44:54:89.42:817,89,0	1/1:2,5:8:20.73:168,21,0	0/0:16,0:10:7.78:0,8,54	0/0:12,0:6:2.68:0,3,14	0/0:20,0:23:43.61:0,44,496	1/1:6,3:9:5.86:53,6,0	1/1:6,9:14:17.92:158,18,0	0/0:16,0:27:45.47:0,45,228	0/0:3,0:13:19.96:0,20,69	0/0:13,0:30:38.99:0,39,441	0/0:9,0:21:36.83:0,37,312	1/1:1,6:7:11.99:103,12,0	0/0:8,0:12:23.56:0,24,281	1/1:8,5:13:11.85:105,12,0	1/1:2,9:11:26.88:230,27,0	0/1:3,15:18:3.91:251,0,4	1/1:6,31:37:55.74:561,56,0	1/1:4,14:18:41.45:340,41,0	1/1:4,11:14:26.89:231,27,0	1/1:4,11:19:8.17:238,8,0	1/1:4,6:11:4.37:74,4,0	1/1:1,11:14:23.53:241,24,0	0/0:13,0:14:35.32:0,35,428	0/0:14,0:18:38.19:0,38,448	1/1:6,8:14:20.70:170,21,0	1/1:10,6:16:30.38:247,30,0	0/1:7,13:20:25.66:135,0,26	1/1:3,11:14:32.86:278,33,0
chr10	65361072	.	ATG	A	165.61	PASS	AB=0.914;AC=13;AF=0.260;AN=50;BaseQRankSum=4.568;DP=655;FS=7.544;HRun=0;HaplotypeScore=85.5670;InbreedingCoeff=-0.3624;MQ=66.74;MQ0=8;MQRankSum=0.371;QD=0.52;ReadPosRankSum=0.789;VQSLOD=1.0408;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:28,3:31:14.24:14,0,138	0/0:9,0:9:3.01:0,3,44	./.	./.	0/1:20,1:20:17.22:17,0,125	0/0:11,0:11:12.02:0,12,154	0/1:28,1:30:14.17:14,0,203	./.	0/0:17,0:19:23.10:0,23,236	0/0:17,0:17:12.03:0,12,157	0/1:11,5:16:73.45:80,0,73	0/0:26,0:25:24.08:0,24,349	0/1:10,2:12:49.42:49,0,116	0/1:26,2:28:46.42:46,0,158	0/1:30,1:32:14.34:14,0,363	0/0:19,0:19:24.05:0,24,306	0/0:26,1:26:3.84:0,4,388	0/0:10,0:17:18.02:0,18,188	0/0:13,0:13:3:0,3,26	0/1:13,5:18:20.22:20,0,100	0/0:52,0:52:21.57:0,22,384	0/1:18,3:22:14.20:14,0,183	0/1:19,1:20:13.51:14,0,236	0/1:28,0:29:1.13:1,0,279	0/1:21,0:21:10.73:11,0,140	0/1:40,0:40:5.94:6,0,282	0/0:22,0:22:18.06:0,18,259	0/0:8,0:7:9:0,9,107
chr10	65364916	.	T	TA	4331.21	PASS	AB=0.599;AC=36;AF=0.643;AN=56;BaseQRankSum=-5.890;DP=538;FS=5.637;HRun=12;HaplotypeScore=61.8798;InbreedingCoeff=0.5156;MQ=82.76;MQ0=0;MQRankSum=-2.667;QD=10.62;ReadPosRankSum=-0.117;VQSLOD=4.0516;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:12,38:50:29.15:410,29,0	1/1:2,3:5:6.01:58,6,0	0/0:19,0:19:20.46:0,20,118	0/0:20,0:20:25.92:0,26,162	0/0:14,0:15:31.79:0,32,223	1/1:3,10:16:19.95:199,20,0	0/1:7,16:25:3.36:342,0,3	0/0:24,0:24:22.86:0,23,172	1/1:8,21:29:17.16:328,17,0	1/1:15,0:25:23.48:131,23,0	1/1:5,1:17:27.26:166,27,0	0/1:5,7:13:28.85:63,0,29	0/0:11,0:12:16.88:0,17,115	0/1:4,13:17:19.77:151,0,20	1/1:7,15:22:1.19:150,1,0	0/1:4,9:13:16.79:172,0,17	1/1:2,18:20:33.04:315,33,0	0/1:5,14:19:10.76:229,0,11	1/1:8,9:17:21.03:204,21,0	1/1:4,4:8:13.27:120,13,0	1/1:7,21:28:39.53:380,40,0	1/1:7,5:13:11.86:102,12,0	0/0:14,0:15:19.82:0,20,137	0/0:22,0:23:34.68:0,35,242	1/1:6,11:18:23.98:223,24,0	1/1:6,12:18:27:248,27,0	1/1:4,19:22:26.72:252,27,0	0/1:5,6:12:7.05:87,0,7
chr10	65364935	.	C	CTGGTAAGA	1147.98	PASS	AB=0.923;AC=3;AF=0.054;AN=56;BaseQRankSum=-2.678;DP=464;FS=1.152;HRun=0;HaplotypeScore=131.8322;InbreedingCoeff=0.6707;MQ=75.46;MQ0=0;MQRankSum=-3.007;QD=31.03;ReadPosRankSum=-2.772;VQSLOD=2.9367;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:51.17:0,51,1191	0/0:7,0:7:18.05:0,18,406	0/1:11,0:10:7.57:8,0,415	0/0:13,0:13:32.94:0,33,762	0/0:15,0:15:36.12:0,36,955	0/0:14,0:14:30.10:0,30,791	0/0:27,0:27:63.20:0,63,1487	1/1:19,4:25:33.10:1241,33,0	0/0:21,0:21:33.10:0,33,807	0/0:14,0:14:27.08:0,27,591	0/0:14,0:14:36.12:0,36,930	0/0:14,0:14:18.06:0,18,446	0/0:12,0:12:30.09:0,30,735	0/0:14,0:14:33.11:0,33,845	0/0:17,0:17:27.09:0,27,702	0/0:11,0:11:27.09:0,27,691	0/0:19,0:19:36.10:0,36,868	0/0:22,0:22:39.09:0,39,979	0/0:14,0:14:33.06:0,33,673	0/0:9,0:9:21.07:0,21,491	0/0:23,0:23:42.11:0,42,1013	0/0:12,0:12:33.08:0,33,768	0/0:14,0:14:36.12:0,36,961	0/0:16,0:16:39.13:0,39,1042	0/0:16,0:16:27.09:0,27,702	0/0:19,0:19:48.16:0,48,1228	0/0:18,0:17:38.67:0,39,968	0/0:12,0:11:24.08:0,24,634
chr10	65365358	.	G	GGT	2329.15	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-8.099;DP=767;FS=14.404;HRun=0;HaplotypeScore=92.6699;InbreedingCoeff=0.9977;MQ=72.99;MQ0=0;MQRankSum=-1.568;QD=39.48;ReadPosRankSum=-1.188;VQSLOD=4.1340;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,105,1337	0/0:8,0:8:21.07:0,21,267	0/0:20,0:20:45.61:0,46,559	0/0:18,0:18:35.59:0,36,412	0/0:29,0:29:87.28:0,87,1108	0/0:21,0:21:57.18:0,57,726	0/0:21,0:21:51.16:0,51,649	0/0:33,0:33:72.18:0,72,887	0/0:26,0:26:75.24:0,75,955	1/1:4,31:35:93.32:1553,93,0	1/1:7,17:24:54.18:897,54,0	0/0:30,0:30:81.26:0,81,1031	0/0:31,0:31:78.25:0,78,992	0/0:33,0:33:90.28:0,90,1132	0/0:29,0:29:81.26:0,81,1030	0/0:13,0:13:36.10:0,36,444	0/0:38,0:38:99:0,105,1323	0/0:23,0:23:60.19:0,60,764	0/0:24,0:24:57.18:0,57,726	0/0:28,0:28:72.23:0,72,909	0/0:59,0:59:99:0,141,1781	0/0:20,0:20:60.19:0,60,764	0/0:25,0:25:57.17:0,57,712	0/0:25,0:25:66.21:0,66,840	0/0:19,0:19:51.13:0,51,632	0/0:35,0:35:87.28:0,87,1108	0/0:44,0:44:99:0,117,1462	0/0:16,0:16:39.12:0,39,497
chr10	65366392	.	GCA	G	7408.79	PASS	AB=0.719;AC=35;AF=0.625;AN=56;BaseQRankSum=10.350;DP=525;FS=3.810;HRun=0;HaplotypeScore=62.9772;InbreedingCoeff=0.7658;MQ=62.84;MQ0=9;MQRankSum=-0.091;QD=20.99;ReadPosRankSum=4.495;VQSLOD=5.0291;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,17:24:18.09:459,18,0	1/1:0,4:4:9.03:112,9,0	0/1:13,0:8:3.15:3,0,68	0/0:10,0:4:5.48:0,5,32	0/0:19,0:19:57.16:0,57,877	1/1:4,22:26:57.18:707,57,0	1/1:2,13:15:27.08:335,27,0	0/0:40,0:40:37.92:0,38,937	0/0:23,0:23:33.39:0,33,833	0/0:17,0:17:48.15:0,48,725	0/0:18,1:19:10.98:0,11,698	1/1:2,15:17:33.10:409,33,0	0/0:15,0:15:39.10:0,39,575	1/1:3,10:13:21.07:258,21,0	1/1:5,14:19:24.07:298,24,0	1/1:7,17:24:35.99:446,36,0	1/1:3,23:26:57.18:707,57,0	1/1:1,13:14:24.08:298,24,0	0/1:4,11:15:13.03:362,0,13	1/1:5,16:20:39.12:481,39,0	1/1:1,18:19:33.02:409,33,0	1/1:3,16:19:38.81:483,39,0	0/0:18,1:18:48.15:0,48,760	0/0:10,0:10:21.05:0,21,318	1/1:3,10:13:24.08:298,24,0	0/1:5,13:18:59.38:342,0,59	1/1:10,23:30:54.17:669,54,0	1/1:2,17:17:27.08:335,27,0
chr10	65367692	.	ATG	A	2495.40	PASS	AB=0.900;AC=7;AF=0.125;AN=56;BaseQRankSum=1.277;DP=777;FS=0.894;HRun=0;HaplotypeScore=134.3522;InbreedingCoeff=0.8184;MQ=57.95;MQ0=2;MQRankSum=2.514;QD=22.69;ReadPosRankSum=-0.647;VQSLOD=4.1517;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,2:40:24.76:0,25,847	0/0:7,0:7:15.05:0,15,249	0/0:39,1:26:43.62:0,44,685	0/0:27,0:20:26.24:0,26,387	0/0:29,0:29:75.24:0,75,1216	0/0:23,1:24:13.50:0,14,730	0/0:23,0:23:36.09:0,36,543	0/0:30,1:31:34.36:0,34,1030	1/1:8,19:27:54.47:622,54,0	1/1:6,33:39:99:1257,102,0	1/1:5,30:35:60.18:742,60,0	0/0:28,1:29:60.20:0,60,990	0/0:18,0:18:48.08:0,48,668	0/0:33,0:33:66.18:0,66,1018	0/0:27,1:27:46.04:0,46,749	0/0:33,1:33:46.47:0,46,1281	0/0:23,1:24:16.31:0,16,751	0/0:29,1:30:19.13:0,19,759	0/0:17,0:15:30.06:0,30,420	0/0:25,1:26:19.36:0,19,803	0/0:39,0:39:44.45:0,44,1046	0/0:18,0:18:45.15:0,45,746	0/0:26,0:26:63.22:0,63,1043	0/0:26,2:28:31.37:0,31,977	0/0:22,0:21:51.16:0,51,822	0/0:29,1:30:52.47:0,52,1376	0/0:41,2:43:20.79:0,21,1351	0/1:8,1:9:22.33:22,0,184
chr10	65367759	.	G	GTA	15196.20	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=4.649;DP=674;FS=4.666;HRun=0;HaplotypeScore=166.4088;InbreedingCoeff=0.9872;MQ=57.07;MQ0=3;MQRankSum=2.163;QD=27.88;ReadPosRankSum=2.579;VQSLOD=5.9191;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,24:30:25.42:442,25,0	1/1:0,7:7:18.06:306,18,0	0/0:24,0:15:26.37:0,26,265	0/0:19,0:10:14.46:0,14,138	0/0:22,0:22:56.98:0,57,693	1/1:5,15:20:34.25:608,34,0	1/1:10,16:26:30.09:483,30,0	1/1:6,37:43:99:1515,102,0	1/1:8,20:28:60.12:952,60,0	1/1:15,15:30:75.24:1203,75,0	1/1:12,17:29:57.15:875,57,0	1/1:9,15:24:38.99:577,39,0	0/0:23,0:23:66.16:0,66,810	1/1:4,21:25:36.02:612,36,0	1/1:5,19:24:22.92:363,23,0	1/1:11,14:25:42.06:626,42,0	1/1:5,12:17:13.22:331,13,0	1/1:1,25:26:33.11:560,33,0	1/1:3,12:14:39.13:643,39,0	1/1:5,24:29:29.64:744,30,0	1/1:2,24:27:41.51:713,42,0	1/1:11,3:14:23.87:335,24,0	0/0:13,0:13:36.07:0,36,423	0/0:27,0:28:63.20:0,63,817	1/1:3,26:29:47.85:816,48,0	1/1:12,22:34:90.24:1401,90,0	1/1:14,14:28:49.93:766,50,0	1/1:5,9:14:21.03:326,21,0
chr10	65367792	.	A	ATGTGTGTG	10997.98	PASS	AB=0.810;AC=39;AF=0.696;AN=56;BaseQRankSum=0.403;DP=617;FS=7.230;HRun=0;HaplotypeScore=246.0315;InbreedingCoeff=0.6437;MQ=49.52;MQ0=7;MQRankSum=-6.602;QD=23.60;ReadPosRankSum=-3.239;VQSLOD=3.1072;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:30,3:32:13.97:440,14,0	1/1:8,0:8:2.32:82,2,0	0/0:23,0:8:3.36:0,3,124	0/0:21,0:10:5.77:0,6,96	0/0:19,0:21:42.03:0,42,995	1/1:11,5:22:33.06:837,33,0	1/1:22,2:24:6.84:280,7,0	0/1:29,0:34:84.90:195,0,85	0/0:14,0:23:23.56:0,24,246	0/1:15,0:23:10.23:10,0,194	0/1:14,0:17:3.32:3,0,50	1/1:14,7:22:16:681,16,0	0/0:19,0:19:33.11:0,33,811	1/1:18,2:23:14.75:358,15,0	1/1:16,3:21:14.90:484,15,0	1/1:12,12:28:28.89:1478,29,0	1/1:14,2:17:26.91:689,27,0	1/1:18,2:22:20.72:706,21,0	1/1:18,0:18:7.84:199,8,0	1/1:22,4:25:14.46:395,14,0	1/1:22,0:22:12.89:205,13,0	1/1:2,2:5:5.54:247,6,0	0/0:13,0:13:30.09:0,30,683	0/0:31,0:31:29:0,29,1663	1/1:23,0:28:26.11:680,26,0	1/1:27,10:36:54.19:1846,54,0	1/1:12,6:23:27.66:944,28,0	1/1:6,0:8:9.03:238,9,0
chr10	65368015	.	AAATAAAT	A	2241.71	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=9.250;DP=535;FS=0.000;HRun=0;HaplotypeScore=126.5876;InbreedingCoeff=0.8485;MQ=59.45;MQ0=0;MQRankSum=-2.054;QD=35.58;ReadPosRankSum=-2.472;VQSLOD=3.0213;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,138,4544	0/0:10,0:10:30.09:0,30,975	0/0:20,0:16:39.10:0,39,834	0/1:10,0:8:1.95:2,0,446	0/0:18,0:18:54.17:0,54,1676	0/0:12,0:12:36.11:0,36,1162	0/0:29,0:29:84.23:0,84,2526	0/0:28,0:29:54.25:0,54,980	0/0:6,0:6:18.06:0,18,597	1/1:4,25:29:78.11:1311,78,0	1/1:0,24:24:63.12:1051,63,0	0/0:14,0:13:39.09:0,39,961	0/0:13,0:13:39.10:0,39,1243	0/0:10,0:10:30.09:0,30,983	0/0:12,0:12:36.10:0,36,1049	0/0:8,0:7:21.06:0,21,635	0/0:32,0:32:63.24:0,63,2778	0/0:10,0:10:30.08:0,30,956	0/0:34,0:33:96.29:0,96,2868	0/0:26,0:26:78.25:0,78,2574	0/0:14,0:14:42.10:0,42,1279	0/0:12,0:12:33.08:0,33,1078	0/0:21,0:21:57.17:0,57,1817	0/0:17,0:17:48.13:0,48,1582	0/0:27,0:27:78.24:0,78,2648	0/0:27,0:26:75.19:0,75,2441	0/0:15,0:15:42.08:0,42,1313	0/0:7,0:7:21.07:0,21,567
chr10	65368017	.	AT	A	1276.64	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=9.010;DP=538;FS=2.337;HRun=1;HaplotypeScore=65.9708;InbreedingCoeff=0.8848;MQ=59.64;MQ0=0;MQRankSum=-3.673;QD=13.88;ReadPosRankSum=-2.550;VQSLOD=1.9548;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,141,1688	0/0:10,0:10:29.99:0,30,331	0/0:19,1:16:34.69:0,35,359	0/1:10,0:8:2.56:3,0,149	0/0:20,0:20:59.94:0,60,680	0/0:12,0:12:36.07:0,36,422	0/0:28,0:28:84.06:0,84,966	1/1:16,14:30:74.49:883,74,0	0/0:7,0:7:18.02:0,18,221	1/1:28,0:28:53.51:277,54,0	1/1:24,0:24:49.21:258,49,0	0/0:14,0:13:39.01:0,39,424	0/0:13,0:13:39.08:0,39,466	0/0:13,0:13:39:0,39,431	0/0:12,0:12:36.08:0,36,422	0/0:8,0:7:21.04:0,21,243	0/0:33,0:33:94.73:0,95,1167	0/0:11,0:11:33.04:0,33,380	0/0:34,0:33:96.19:0,96,1134	0/0:26,0:26:78.23:0,78,990	0/0:14,0:14:42:0,42,479	0/0:11,0:11:32.12:0,32,385	0/0:20,0:20:57.15:0,57,700	0/0:18,0:18:54.10:0,54,642	0/0:27,0:27:81.22:0,81,1015	0/0:26,0:25:75.12:0,75,904	0/0:14,0:14:39.02:0,39,454	0/0:7,0:7:21.05:0,21,249
chr10	65368740	.	C	CAAA	6690.33	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-0.419;DP=497;FS=0.476;HRun=11;HaplotypeScore=70.5443;InbreedingCoeff=0.8910;MQ=51.85;MQ0=15;MQRankSum=-4.060;QD=19.28;ReadPosRankSum=-1.842;VQSLOD=2.7443;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,20:31:54.86:757,55,0	1/1:4,4:9:15.85:229,16,0	0/0:4,0:1:3.01:0,3,33	0/0:9,0:3:4.01:0,4,31	0/0:19,0:19:29.97:0,30,350	1/1:1,18:20:36.12:664,36,0	1/1:9,7:16:21.07:373,21,0	0/0:24,0:24:44.84:0,45,503	1/1:4,0:14:11.21:24,11,0	0/0:25,0:22:41.99:0,42,470	0/0:21,0:22:54.01:0,54,599	1/1:4,9:17:22.25:283,22,0	0/0:16,0:17:41.88:0,42,415	1/1:6,5:13:6.02:113,6,0	1/1:4,6:11:12:189,12,0	1/1:1,6:9:12.02:192,12,0	1/1:8,13:21:23.89:451,24,0	1/1:12,12:26:28.32:436,28,0	1/1:6,9:14:36.04:502,36,0	1/1:21,0:20:44.85:449,45,0	1/1:4,4:10:9.01:136,9,0	1/1:3,17:21:31.30:475,31,0	0/0:17,0:17:34.69:0,35,390	0/0:12,0:12:27:0,27,313	1/1:9,12:20:19.85:379,20,0	1/1:17,6:22:9.62:613,10,0	1/1:10,12:21:13.22:157,13,0	1/1:6,6:14:18.49:269,18,0
chr10	65369462	.	ATTGTTATTATTGTTGTTG	A	824.29	PASS	AB=0.960;AC=5;AF=0.089;AN=56;BaseQRankSum=3.442;DP=655;FS=2.279;HRun=0;HaplotypeScore=343.9557;InbreedingCoeff=0.7460;MQ=62.93;MQ0=1;MQRankSum=1.463;QD=12.30;ReadPosRankSum=0.533;VQSLOD=1.3593;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:85.51:0,86,1220	0/0:11,0:11:31.52:0,32,442	0/0:27,0:22:57.19:0,57,1185	0/0:18,0:15:39.12:0,39,759	0/0:29,0:29:84.27:0,84,4392	0/0:22,0:22:42.77:0,43,593	0/0:23,0:23:48.81:0,49,829	0/0:36,0:36:94.34:0,94,1662	0/0:26,0:26:56.91:0,57,915	1/1:9,14:23:21.96:427,22,0	1/1:17,3:20:8.71:402,9,0	0/0:23,0:23:45.42:0,45,460	0/0:19,0:19:57.18:0,57,2586	0/0:17,0:17:30.29:0,30,515	0/0:30,0:30:54.55:0,55,851	0/0:16,0:16:25.94:0,26,312	0/0:17,0:17:45.15:0,45,861	0/0:12,0:12:25.92:0,26,314	0/0:17,0:17:47.58:0,48,782	0/0:29,0:29:62.03:0,62,865	0/0:43,0:43:78.25:0,78,1200	0/0:22,0:22:51.81:0,52,728	0/0:19,0:19:53.66:0,54,2278	0/0:17,0:17:51.16:0,51,2472	0/0:27,0:27:44.18:0,44,494	0/1:23,1:24:99:118,0,692	0/0:32,0:32:46.12:0,46,402	0/0:19,0:19:43.57:0,44,627
chr10	65369471	.	ATTGTTGTTGTTG	A	14088.55	PASS	AC=42;AF=0.808;AN=52;BaseQRankSum=9.837;DP=649;FS=0.000;HRun=0;HaplotypeScore=212.8560;InbreedingCoeff=0.8457;MQ=59.26;MQ0=4;MQRankSum=-9.075;QD=28.01;ReadPosRankSum=-0.800;VQSLOD=3.6734;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,19:38:33.10:953,33,0	1/1:6,3:9:9.03:272,9,0	0/0:24,0:19:3.01:0,3,45	./.	0/0:31,0:30:60.19:0,60,2482	1/1:9,13:22:27.09:911,27,0	1/1:12,9:21:12.04:411,12,0	1/1:26,0:35:17.08:132,17,0	1/1:13,15:28:27.09:927,27,0	1/1:22,0:22:6.69:168,7,0	1/1:16,0:16:9.03:218,9,0	1/1:9,14:23:30.10:998,30,0	0/0:19,0:19:30.10:0,30,1374	1/1:7,9:16:12.04:413,12,0	1/1:13,17:30:27.09:912,27,0	1/1:5,12:17:21.07:722,21,0	./.	1/1:5,10:15:15.05:430,15,0	1/1:13,5:17:14.82:388,15,0	1/1:11,16:27:30.10:992,30,0	1/1:26,18:44:3:34,3,0	1/1:11,11:22:27.09:858,27,0	0/0:18,0:18:24.08:0,24,1249	0/0:18,0:18:33.09:0,33,1480	1/1:8,16:24:33.11:1135,33,0	1/1:11,12:23:32.62:984,33,0	1/1:7,26:33:47.73:1650,48,0	1/1:10,9:19:18.06:579,18,0
chr10	65370059	.	TTG	T	689.62	PASS	AB=0.946;AC=16;AF=0.296;AN=54;BaseQRankSum=5.417;DP=675;FS=2.667;HRun=0;HaplotypeScore=107.7042;InbreedingCoeff=0.1461;MQ=59.16;MQ0=6;MQRankSum=0.591;QD=2.09;ReadPosRankSum=0.698;VQSLOD=1.5769;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:42,1:42:13.16:0,13,838	0/0:10,0:11:27.08:0,27,394	1/1:14,0:10:0.89:2,1,0	./.	0/1:21,4:24:19.70:20,0,537	0/0:19,0:18:27.09:0,27,401	0/0:25,0:25:10.70:0,11,580	0/0:41,0:41:27.39:0,27,304	0/1:18,0:18:2.25:37,0,2	1/1:16,16:32:34.27:431,34,0	1/1:9,10:19:18.04:195,18,0	0/1:28,4:32:42.92:43,0,695	0/0:22,2:24:13.34:0,13,594	0/0:23,0:22:45.10:0,45,659	0/0:16,0:17:30.09:0,30,440	0/0:20,0:21:42.07:0,42,593	0/0:30,0:30:63.14:0,63,883	0/0:24,0:23:28.02:0,28,534	0/1:25,1:25:1.11:1,0,363	0/0:19,0:19:38.45:0,38,533	0/1:36,2:38:34.88:35,0,760	0/1:29,2:30:28.46:28,0,462	0/1:23,2:25:18.80:19,0,549	0/0:27,0:26:50.96:0,51,722	0/1:20,1:21:24.66:25,0,561	0/1:36,1:37:0.23:0,0,771	0/0:14,0:14:29.69:0,30,419	0/1:10,0:10:9.89:10,0,250
chr10	65370087	.	G	GTGTC	151.91	PASS	AB=1.000;AC=3;AF=0.056;AN=54;BaseQRankSum=5.746;DP=726;FS=8.726;HRun=0;HaplotypeScore=146.4430;InbreedingCoeff=0.3539;MQ=52.80;MQ0=21;MQRankSum=-3.107;QD=2.34;ReadPosRankSum=-2.659;VQSLOD=0.8026;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:39:70.78:0,71,1286	0/0:11,0:10:27.08:0,27,470	0/0:8,0:3:3.01:0,3,43	./.	0/0:29,0:28:59.58:0,60,868	0/0:18,0:17:39.06:0,39,582	0/0:24,0:24:60.13:0,60,917	0/1:48,0:43:20.35:20,0,377	1/1:9,5:17:1.07:220,1,0	0/0:37,0:35:63.23:0,63,780	0/0:18,0:17:27.04:0,27,286	0/0:37,0:36:79.02:0,79,1219	0/0:23,0:22:63.02:0,63,946	0/0:21,0:20:57.13:0,57,923	0/0:15,0:15:35.92:0,36,579	0/0:24,0:23:56.98:0,57,820	0/0:36,0:36:86.97:0,87,1263	0/0:25,0:24:41.21:0,41,868	0/0:26,0:23:62.09:0,62,767	0/0:20,0:18:51.06:0,51,769	0/0:62,0:60:99:0,116,1491	0/0:31,0:30:47.85:0,48,751	0/0:21,0:20:56.16:0,56,867	0/0:32,0:31:65.94:0,66,983	0/0:24,0:24:63.12:0,63,929	0/0:35,0:35:93.70:0,94,1266	0/0:19,0:19:44.55:0,45,608	0/0:14,0:13:35.99:0,36,443
chr10	65370091	.	GTA	G	154.36	PASS	AB=0.971;AC=6;AF=0.111;AN=54;BaseQRankSum=10.215;DP=738;FS=25.092;HRun=0;HaplotypeScore=116.9751;InbreedingCoeff=0.1408;MQ=51.85;MQ0=24;MQRankSum=-0.913;QD=1.07;ReadPosRankSum=-0.714;VQSLOD=0.4518;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:40:65.96:0,66,1228	0/0:13,0:12:36.09:0,36,579	0/0:8,0:2:2.88:0,3,15	./.	0/0:31,0:30:36.76:0,37,787	0/0:17,0:16:39.05:0,39,596	0/0:24,0:24:56.60:0,57,947	0/1:48,1:43:23.68:24,0,513	1/1:15,1:16:8.80:84,9,0	0/1:37,0:35:93.10:93,0,237	0/1:17,2:18:60.28:60,0,94	0/0:37,1:37:13.68:0,14,954	0/0:23,0:22:47.35:0,47,820	0/0:21,0:20:55.63:0,56,867	0/0:16,0:16:38.72:0,39,622	0/0:23,0:22:54.02:0,54,797	0/0:35,0:35:82.61:0,83,1233	0/0:25,0:24:3.36:0,3,760	0/0:27,0:23:54.86:0,55,725	0/0:20,0:18:41.76:0,42,690	0/0:63,0:61:47.67:0,48,1273	0/0:30,0:29:4.97:0,5,752	0/0:22,0:21:4.05:0,4,720	0/0:31,0:30:68.68:0,69,981	0/1:23,0:23:15.49:15,0,750	0/0:35,0:35:43.99:0,44,1063	0/0:23,0:23:47.18:0,47,652	0/0:14,0:13:19.67:0,20,355
chr10	65370123	.	GTATA	G	38.62	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.796;DP=800;FS=4.249;HRun=0;HaplotypeScore=135.6307;InbreedingCoeff=0.9211;MQ=53.85;MQ0=21;MQRankSum=-4.538;QD=2.76;ReadPosRankSum=-1.427;VQSLOD=2.2137;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:66.16:0,66,1624	0/0:12,0:12:33.11:0,33,819	0/0:48,0:14:39.13:0,39,882	0/0:52,0:10:24.59:0,25,414	0/0:35,0:35:87.26:0,87,2148	0/0:20,0:19:38.96:0,39,947	0/0:21,0:21:57.15:0,57,1301	0/0:58,0:55:99:0,129,3200	1/1:5,6:14:8.39:121,8,0	0/0:37,0:37:99:0,102,2603	0/0:17,0:17:39.12:0,39,933	0/0:40,0:40:73.35:0,73,2156	0/0:24,0:24:66.22:0,66,1655	0/0:21,0:20:48.09:0,48,1053	0/0:19,0:19:48.16:0,48,1272	0/0:20,0:19:48.16:0,48,1225	0/0:36,0:36:96.65:0,97,2318	0/0:20,1:21:18.91:0,19,1310	0/0:21,0:17:42:0,42,962	0/0:14,0:14:39.11:0,39,923	0/0:74,0:73:99:0,167,4248	0/0:29,0:29:78.21:0,78,1959	0/0:16,0:15:42.07:0,42,939	0/0:34,0:34:83.26:0,83,2132	0/0:25,0:25:66.18:0,66,1658	0/0:24,0:24:72.24:0,72,1841	0/0:23,0:23:57:0,57,1420	0/0:13,0:13:35.95:0,36,905
chr10	65370304	.	ATGTGTGTGTGTG	A	4234.68	PASS	AB=0.748;AC=33;AF=0.589;AN=56;BaseQRankSum=7.867;DP=911;FS=1.395;HRun=0;HaplotypeScore=299.7358;InbreedingCoeff=0.4635;MQ=47.35;MQ0=30;MQRankSum=-4.773;QD=7.96;ReadPosRankSum=0.543;VQSLOD=3.3106;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:37,13:50:2.42:21,2,0	1/1:7,3:10:3.01:104,3,0	0/0:79,0:25:18.06:0,18,485	0/0:80,0:23:7.74:0,8,145	0/0:15,0:15:21.04:0,21,880	1/1:4,8:11:2.54:104,3,0	1/1:18,13:31:5.45:193,5,0	0/1:32,3:34:99:173,0,113	0/0:11,0:16:12.50:0,12,263	1/1:24,0:35:24.54:500,25,0	0/1:8,0:14:0:0,0,0	1/1:27,8:36:11.62:285,12,0	0/0:23,0:23:30.54:0,31,1304	0/0:16,17:34:0.47:0,0,1	0/1:12,18:31:0.27:0,0,1	1/1:9,13:21:11.98:395,12,0	0/1:21,14:34:10.32:297,0,10	0/1:21,8:28:87.53:295,0,88	1/1:17,0:19:6.02:107,6,0	1/1:10,10:22:3.48:105,3,0	1/1:68,0:66:0.40:1,0,0	0/0:12,12:27:1.85:0,2,4	0/0:25,0:26:39.12:0,39,1559	0/0:70,0:78:99:0,126,6582	1/1:14,12:26:2.53:104,3,0	1/1:11,9:21:21.07:557,21,0	1/1:4,10:14:3.96:292,4,0	1/1:9,11:19:18.15:701,18,0
chr10	65370728	.	C	CCCA	7913.64	PASS	AB=0.913;AC=7;AF=0.125;AN=56;BaseQRankSum=-11.256;DP=627;FS=33.240;HRun=0;HaplotypeScore=116.0315;InbreedingCoeff=0.8196;MQ=69.04;MQ0=0;MQRankSum=-5.557;QD=56.93;ReadPosRankSum=0.606;VQSLOD=3.4166;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,99,1809	0/0:17,0:17:45.15:0,45,835	0/0:7,0:8:20.10:0,20,313	0/0:15,0:15:42.62:0,43,778	0/0:15,0:15:45.14:0,45,804	0/0:11,0:11:33.11:0,33,602	0/0:25,0:25:75.26:0,75,1398	0/0:22,0:22:63.22:0,63,1173	1/1:0,13:15:39.13:961,39,0	1/1:9,46:58:99:3928,166,0	1/1:2,42:45:99:2948,120,0	0/0:22,0:22:63.20:0,63,1135	0/0:16,0:16:48.15:0,48,863	0/0:23,0:23:69.24:0,69,1286	0/0:24,0:24:72.25:0,72,1334	0/0:19,0:19:54.14:0,54,955	0/0:34,0:34:99:0,99,1788	0/0:14,0:14:42.14:0,42,770	0/0:30,0:30:90.31:0,90,1665	0/0:19,0:19:57.20:0,57,1040	0/0:29,0:29:81.28:0,81,1500	0/0:21,0:21:63.22:0,63,1173	0/0:16,0:16:48.15:0,48,862	0/0:27,0:27:81.23:0,81,1474	0/0:23,0:23:63.22:0,63,1174	0/1:19,2:21:76.82:77,0,973	0/0:21,0:21:60.19:0,60,1086	0/0:3,0:3:9.03:0,9,158
chr10	65370896	.	C	CTTTT	5497.31	PASS	AB=0.747;AC=40;AF=0.714;AN=56;BaseQRankSum=-0.696;DP=475;FS=4.829;HRun=13;HaplotypeScore=98.1716;InbreedingCoeff=0.4470;MQ=69.35;MQ0=1;MQRankSum=-6.136;QD=13.88;ReadPosRankSum=-5.552;VQSLOD=0.8563;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:22,13:37:36.59:585,37,0	1/1:0,1:2:3.01:67,3,0	0/0:11,0:8:0.14:0,0,31	0/1:15,0:15:8.12:8,0,86	0/0:14,0:19:23.28:0,23,274	0/1:1,2:12:8.26:177,0,8	1/1:15,2:20:1.08:517,1,0	0/0:12,0:19:10.12:0,10,123	0/1:4,0:14:5.71:8,0,6	0/1:21,0:40:5.64:6,0,108	0/1:17,0:33:63.78:64,0,72	1/1:14,0:18:19.79:224,20,0	0/1:10,0:11:1.17:1,0,191	1/1:8,5:14:14.72:260,15,0	1/1:11,3:19:25.60:339,26,0	1/1:6,0:9:21.07:311,21,0	1/1:10,7:19:21.07:402,21,0	1/1:5,9:16:21.07:423,21,0	1/1:17,1:23:24.08:531,24,0	1/1:5,2:13:23.96:334,24,0	1/1:7,2:16:14.26:171,14,0	1/1:12,5:17:22.76:317,23,0	0/0:10,0:13:21.75:0,22,254	0/0:15,0:17:35.77:0,36,426	1/1:5,0:10:13.80:159,14,0	1/1:11,7:20:21.15:343,21,0	1/1:3,7:10:11.22:147,11,0	1/1:2,1:5:6.02:103,6,0
chr10	65371290	.	A	AAAAAC	1244.01	PASS	AB=1.000;AC=8;AF=0.148;AN=54;BaseQRankSum=4.185;DP=510;FS=5.218;HRun=0;HaplotypeScore=100.3095;InbreedingCoeff=0.3018;MQ=48.36;MQ0=15;MQRankSum=1.493;QD=6.91;ReadPosRankSum=1.867;VQSLOD=1.8656;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:28:57.82:58,0,215	0/0:6,0:6:6.65:0,7,37	0/0:25,0:7:10.72:0,11,108	0/0:17,0:7:6.26:0,6,93	0/0:13,0:13:34.59:0,35,270	0/1:24,0:23:11.36:11,0,106	0/0:15,0:14:14.39:0,14,127	0/0:30,0:30:35.01:0,35,343	0/0:14,0:14:39.98:0,40,473	1/1:15,40:65:45.72:1075,46,0	1/1:10,0:28:29.28:215,29,0	0/0:11,0:11:12.47:0,12,77	0/0:15,0:15:37.45:0,37,242	0/0:7,0:7:15.12:0,15,103	0/0:10,0:9:5.68:0,6,88	0/1:11,0:11:0.12:0,0,46	0/0:32,0:31:37.41:0,37,358	0/0:14,0:14:3.58:0,4,103	0/0:22,0:22:18.25:0,18,145	0/0:9,0:9:12.48:0,12,96	0/0:9,0:9:5.52:0,6,31	0/0:11,0:11:6.30:0,6,100	0/0:18,0:17:39.45:0,39,282	0/0:18,0:17:36.41:0,36,326	0/0:9,0:8:1:0,1,66	0/1:21,0:21:21.11:21,0,121	0/0:21,0:21:36.01:0,36,266	./.
chr10	65372814	.	T	TCA	11342.03	PASS	AB=0.666;AC=30;AF=0.536;AN=56;BaseQRankSum=-6.725;DP=1073;FS=0.362;HRun=0;HaplotypeScore=194.4676;InbreedingCoeff=0.0849;MQ=58.58;MQ0=12;MQRankSum=1.940;QD=14.30;ReadPosRankSum=-3.038;VQSLOD=4.2602;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:34,12:45:0.62:632,1,0	0/1:10,3:13:10.26:256,0,10	0/0:59,0:30:9.01:0,9,92	0/0:56,0:35:5.64:0,6,60	0/0:27,0:27:48.07:0,48,523	0/1:10,13:24:63.29:425,0,63	0/1:17,23:42:8.64:601,0,9	1/1:37,0:37:32.72:202,33,0	0/0:37,0:36:53.92:0,54,263	1/1:112,0:110:99:729,105,0	1/1:53,0:56:31.85:252,32,0	0/1:18,18:39:16.21:642,0,16	0/0:27,0:27:57.04:0,57,623	0/1:9,20:30:35.07:685,0,35	1/1:9,22:34:8.74:739,9,0	1/1:11,19:30:41.06:647,41,0	1/1:14,36:49:80.64:1203,81,0	0/1:12,12:24:6.64:517,0,7	0/1:17,5:21:41.26:194,0,41	1/1:6,9:15:24.08:371,24,0	0/1:48,43:92:94.88:1044,0,95	0/1:9,7:16:36.74:195,0,37	0/0:20,0:21:34.96:0,35,360	0/0:49,1:52:49.46:0,49,946	0/1:12,17:29:69.84:338,0,70	0/1:17,19:39:39.23:654,0,39	0/1:6,18:23:11.42:730,0,11	1/1:6,10:16:3.37:287,3,0
chr10	65372837	.	CACACAT	C	1287.82	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.421;DP=1091;FS=2.824;HRun=0;HaplotypeScore=302.2154;InbreedingCoeff=0.9975;MQ=54.92;MQ0=12;MQRankSum=-7.102;QD=39.02;ReadPosRankSum=-1.302;VQSLOD=2.9846;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:40:85.13:0,85,1810	0/0:16,0:16:45.06:0,45,916	0/0:47,0:22:44.14:0,44,609	0/0:50,0:26:63.60:0,64,804	0/0:29,0:29:78.10:0,78,2153	0/0:25,0:25:57.11:0,57,1378	0/0:43,0:43:74.02:0,74,1740	0/0:48,0:48:85.46:0,85,1913	1/1:3,30:32:57.19:1383,57,0	0/0:118,0:116:99:0,167,3672	0/0:54,0:54:30.08:0,30,940	0/0:46,0:46:99:0,105,2238	0/0:34,0:34:84.90:0,85,2381	0/0:29,0:28:63.16:0,63,1742	0/0:43,0:43:99:0,102,2121	0/0:30,0:30:72.13:0,72,1652	0/0:52,0:51:93.93:0,94,2497	0/0:20,0:20:58.79:0,59,1296	0/0:17,0:17:47.97:0,48,854	0/0:15,0:15:39.06:0,39,875	0/0:94,0:93:99:0,177,3578	0/0:17,0:17:37.08:0,37,826	0/0:25,0:25:60.05:0,60,1541	0/0:51,0:51:99:0,130,3553	0/0:27,0:27:49.07:0,49,1225	0/0:39,0:39:92.46:0,92,2459	0/0:30,0:29:84.19:0,84,2064	0/0:16,0:16:24.67:0,25,629
chr10	65372841	.	CATAT	C	1168.72	PASS	AB=0.974;AC=5;AF=0.089;AN=56;BaseQRankSum=9.009;DP=1071;FS=17.358;HRun=0;HaplotypeScore=265.0403;InbreedingCoeff=0.3406;MQ=54.67;MQ0=10;MQRankSum=-8.851;QD=4.64;ReadPosRankSum=-3.472;VQSLOD=0.6025;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:37:52.99:0,53,1445	0/0:16,0:16:45.10:0,45,804	0/0:44,0:22:53.25:0,53,889	0/0:51,0:28:73.83:0,74,1302	0/0:30,0:30:81.27:0,81,1873	0/0:25,0:25:54.18:0,54,1100	0/0:39,1:40:65.58:0,66,1379	0/1:49,0:49:50.89:51,0,2116	1/1:32,0:31:57.28:399,57,0	0/1:107,9:115:99:747,0,3714	0/1:54,0:54:96.08:96,0,1002	0/0:43,0:43:99:0,99,1952	0/0:32,0:32:95.04:0,95,2108	0/0:28,0:27:63.20:0,63,1256	0/0:42,0:42:99:0,102,1935	0/0:29,0:29:72.23:0,72,1397	0/0:52,0:51:37.24:0,37,1897	0/0:20,0:20:25.85:0,26,988	0/0:18,0:18:26.05:0,26,715	0/0:16,0:16:39.60:0,40,751	0/0:91,0:90:99:0,176,3269	0/0:17,0:17:35.49:0,35,710	0/0:23,0:23:54.18:0,54,1267	0/0:51,0:52:99:0,141,3069	0/0:26,0:26:45.62:0,46,925	0/0:38,0:38:69.62:0,70,2155	0/0:30,0:29:81.28:0,81,1638	0/0:18,0:18:35.39:0,35,597
chr10	65372842	.	ATATACT	A	2012.20	PASS	AB=0.987;AC=7;AF=0.125;AN=56;BaseQRankSum=6.942;DP=1058;FS=21.314;HRun=0;HaplotypeScore=296.5270;InbreedingCoeff=0.1904;MQ=54.91;MQ0=10;MQRankSum=-8.500;QD=6.43;ReadPosRankSum=-3.119;VQSLOD=0.4698;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:39:53.27:0,53,2047	0/0:16,0:16:39.13:0,39,1035	0/0:45,0:23:59.54:0,60,1299	0/0:48,0:28:79.80:0,80,1973	0/0:30,0:30:81.24:0,81,2498	0/0:24,1:25:40.22:0,40,1598	0/0:38,0:38:68.13:0,68,1960	0/1:45,1:46:99:180,0,2830	1/1:33,0:32:37.97:699,38,0	0/1:109,3:110:99:1033,0,5462	0/1:51,1:52:99:209,0,1438	0/0:43,0:43:99:0,99,2784	0/0:32,0:32:94.54:0,95,2860	0/0:28,0:27:63.19:0,63,1634	0/0:43,0:43:99:0,105,2837	0/0:29,0:29:69.71:0,70,1984	0/1:52,0:51:20.11:20,0,2646	0/0:21,0:21:4.76:0,5,1434	0/0:18,0:18:26.46:0,26,1124	0/0:16,0:16:39.61:0,40,1077	0/0:88,0:87:99:0,172,4518	0/0:17,0:17:17.64:0,18,1040	0/0:22,0:22:54.19:0,54,1689	0/0:51,0:51:99:0,142,4127	0/0:25,0:25:46.66:0,47,1276	0/0:37,1:38:49.64:0,50,2930	0/0:30,0:29:81.28:0,81,2297	0/1:18,0:18:2.37:2,0,758
chr10	65372899	.	CCACA	C	5223.91	PASS	AB=0.829;AC=8;AF=0.143;AN=56;BaseQRankSum=10.246;DP=1080;FS=1.648;HRun=0;HaplotypeScore=213.1322;InbreedingCoeff=0.6890;MQ=58.59;MQ0=20;MQRankSum=0.280;QD=21.06;ReadPosRankSum=1.461;VQSLOD=4.4434;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:46:98.44:0,98,2106	0/0:12,0:15:29.29:0,29,477	0/0:78,0:21:0.13:0,0,44	0/0:78,0:27:24.49:0,24,286	0/0:23,0:23:50.63:0,51,1114	0/0:21,0:21:51.14:0,51,1131	0/0:31,0:33:68.65:0,69,1477	0/1:21,0:32:12.42:12,0,145	1/1:18,14:32:47.46:787,47,0	1/1:32,71:108:99:3230,210,0	1/1:17,37:55:68.52:1190,69,0	0/0:32,0:34:56.88:0,57,1139	0/0:27,0:27:51.18:0,51,1191	0/0:22,0:23:47.88:0,48,1022	0/0:47,0:50:99:0,114,2393	0/0:29,0:30:62.83:0,63,1330	0/0:46,0:46:93.10:0,93,2157	0/0:23,0:27:68.42:0,68,1441	0/0:18,0:19:33.06:0,33,627	0/0:22,0:23:56.77:0,57,1329	0/0:91,0:96:99:0,187,3942	0/0:27,0:28:65.84:0,66,1355	0/1:19,1:21:4.16:4,0,929	0/0:43,0:49:99:0,113,2310	0/0:24,0:26:65.64:0,66,1375	0/0:25,0:25:27.82:0,28,1035	0/0:18,0:20:38.33:0,38,694	0/0:10,0:10:27.06:0,27,581
chr10	65374542	.	TG	T	4528.89	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=11.393;DP=797;FS=11.442;HRun=2;HaplotypeScore=80.3927;InbreedingCoeff=0.9913;MQ=68.58;MQ0=0;MQRankSum=-1.833;QD=34.57;ReadPosRankSum=1.327;VQSLOD=4.4276;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,144,2134	0/0:14,0:14:42.11:0,42,584	0/0:10,0:10:27.08:0,27,356	0/0:20,0:20:46.46:0,46,610	0/0:27,0:27:78.25:0,78,1148	0/0:21,0:21:63.18:0,63,901	0/0:29,0:29:87.26:0,87,1259	0/0:30,0:30:90.29:0,90,1329	0/0:36,0:36:99:0,108,1618	1/1:2,66:68:99:2444,192,0	1/1:0,63:63:99:2084,162,0	0/0:20,0:20:60.20:0,60,897	0/0:25,0:26:75.25:0,75,1115	0/0:32,0:32:96.32:0,96,1433	0/0:19,0:19:57.19:0,57,849	0/0:25,0:25:72.23:0,72,1057	0/0:36,0:36:99:0,108,1587	0/0:28,0:28:81.27:0,81,1206	0/0:16,0:16:48.16:0,48,720	0/0:16,0:16:45.15:0,45,672	0/0:54,0:54:99:0,163,2399	0/0:21,0:21:63.18:0,63,918	0/0:23,0:23:69.22:0,69,1002	0/0:36,0:36:99:0,108,1570	0/0:23,0:23:63.20:0,63,925	0/0:27,1:28:45.32:0,45,1175	0/0:21,0:21:63.21:0,63,944	0/0:5,0:5:15.05:0,15,225
chr10	65375434	.	GAGA	G	16306.69	PASS	AB=0.531;AC=35;AF=0.625;AN=56;BaseQRankSum=1.716;DP=702;FS=6.739;HRun=0;HaplotypeScore=116.6909;InbreedingCoeff=0.9213;MQ=79.55;MQ0=0;MQRankSum=-4.414;QD=38.73;ReadPosRankSum=6.076;VQSLOD=5.8522;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,39:40:87.30:1423,87,0	1/1:2,8:10:14.97:191,15,0	0/0:22,0:22:60.18:0,60,1241	0/0:15,0:15:42.14:0,42,877	0/0:19,0:19:54.17:0,54,1122	1/1:0,23:23:63.17:1005,63,0	1/1:0,25:25:63.17:1018,63,0	0/0:33,0:33:93.30:0,93,1989	0/0:21,0:21:60.19:0,60,1297	0/0:72,0:72:99:0,202,4219	0/0:46,0:46:99:0,135,2911	1/1:1,30:31:78.26:1239,78,0	0/0:16,0:16:39.13:0,39,866	1/1:1,13:14:39.09:580,39,0	1/1:0,21:21:51.13:818,51,0	1/1:1,21:22:51.17:848,51,0	1/1:4,24:28:60.20:985,60,0	1/1:0,18:18:48.16:799,48,0	1/1:1,16:17:48.15:764,48,0	1/1:1,12:13:33.04:514,33,0	1/1:2,42:44:96.75:1531,97,0	1/1:1,13:14:30.10:486,30,0	0/0:17,0:17:45.14:0,45,957	0/0:20,0:20:60.21:0,60,1359	1/1:0,19:19:51.17:835,51,0	0/1:3,23:26:83.81:1004,0,84	1/1:2,38:40:99:1667,102,0	1/1:1,15:16:36.12:599,36,0
chr10	65377121	.	ATGTG	A	4205.90	PASS	AB=0.790;AC=36;AF=0.692;AN=52;BaseQRankSum=4.197;DP=791;FS=0.629;HRun=0;HaplotypeScore=145.9451;InbreedingCoeff=0.5045;MQ=58.08;MQ0=9;MQRankSum=1.273;QD=7.09;ReadPosRankSum=1.295;VQSLOD=2.5687;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:42,10:52:4.87:584,5,0	1/1:10,0:12:11.81:101,12,0	./.	./.	0/0:16,0:19:18.52:0,19,333	1/1:21,9:30:2.39:46,2,0	1/1:22,3:27:25.23:309,25,0	0/0:29,0:28:30.89:0,31,239	0/0:10,0:18:18.04:0,18,298	0/1:33,0:33:25.12:25,0,35	0/0:28,0:27:2.82:0,3,24	1/1:13,8:24:24.06:319,24,0	0/0:20,0:20:27.09:0,27,605	0/1:10,12:24:8.22:154,0,8	1/1:5,16:21:2.61:47,3,0	1/1:12,9:22:15.05:236,15,0	0/1:9,2:26:63.23:63,0,91	1/1:12,11:23:20.84:329,21,0	1/1:18,0:17:6.91:91,7,0	1/1:15,14:30:18.20:237,18,0	1/1:72,8:82:39.39:751,39,0	1/1:5,15:20:11.06:146,11,0	0/0:25,0:25:23.49:0,23,563	0/1:45,1:49:13.43:13,0,1356	1/1:7,15:23:12.98:171,13,0	1/1:21,10:31:18.12:225,18,0	1/1:18,7:26:12.03:150,12,0	1/1:15,3:19:17.71:207,18,0
chr10	65378117	.	CGT	C	3433.66	PASS	AB=0.907;AC=36;AF=0.692;AN=52;BaseQRankSum=-0.465;DP=623;FS=7.652;HRun=0;HaplotypeScore=129.0409;InbreedingCoeff=-0.0621;MQ=62.40;MQ0=17;MQRankSum=1.281;QD=5.96;ReadPosRankSum=5.504;VQSLOD=2.1362;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:24,8:29:26.67:309,27,0	0/1:9,1:9:0:0,0,0	0/1:25,0:17:5.55:6,0,110	./.	0/1:15,1:16:13.78:14,0,206	1/1:16,1:19:4.34:45,4,0	1/1:28,4:30:22.04:246,22,0	0/1:12,4:13:16.20:125,0,16	0/1:15,1:15:29.86:30,0,250	0/1:17,0:19:8.14:67,0,8	./.	0/1:17,2:18:46.09:46,0,48	0/1:13,5:18:99:115,0,309	1/1:21,2:25:4.90:112,5,0	1/1:6,3:9:4.16:119,4,0	1/1:5,3:9:12.48:123,12,0	0/1:28,3:30:33.57:319,0,34	1/1:30,5:36:47.75:465,48,0	0/1:11,0:11:4.43:15,0,4	0/0:9,0:8:2.92:0,3,8	1/1:84,9:87:25.64:603,26,0	0/1:12,1:12:6.17:16,0,6	0/0:15,0:15:27.05:0,27,361	0/1:38,2:40:71.75:72,0,753	1/1:17,5:21:8.40:171,8,0	1/1:25,4:28:9.51:185,10,0	1/1:16,1:17:12.84:108,13,0	1/1:9,3:13:13.28:122,13,0
chr10	65378141	.	TGC	T	1669.69	PASS	AB=0.993;AC=27;AF=0.500;AN=54;BaseQRankSum=-1.029;DP=594;FS=2.770;HRun=0;HaplotypeScore=135.9200;InbreedingCoeff=-0.1943;MQ=49.45;MQ0=21;MQRankSum=0.939;QD=3.46;ReadPosRankSum=-5.565;VQSLOD=0.8315;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:25:14.32:114,0,14	0/0:7,0:6:2.22:0,2,7	0/1:10,1:6:35.03:35,0,53	0/0:12,0:6:5.12:0,5,70	0/0:13,0:13:4.85:0,5,214	0/1:23,0:23:49.55:62,0,50	1/1:29,1:26:19.29:200,19,0	0/1:15,0:10:22.24:48,0,22	0/0:16,0:15:3.61:0,4,302	0/1:30,0:29:42.98:43,0,54	./.	0/1:19,0:18:26.48:26,0,39	0/1:16,0:16:20.66:21,0,371	0/1:23,0:23:6.48:130,0,6	1/1:7,0:7:8.29:45,8,0	0/1:13,0:13:22.20:26,0,22	0/1:36,0:34:39.38:158,0,39	1/1:35,1:35:5.06:177,5,0	1/1:10,0:8:5.13:57,5,0	0/1:5,0:5:2.71:31,0,3	0/1:93,2:84:74.12:307,0,74	0/1:14,0:12:1.71:13,0,2	0/0:14,0:14:35.94:0,36,493	0/0:41,0:41:58.73:0,59,1133	1/1:23,0:23:6.11:131,6,0	1/1:24,0:20:1.01:159,1,0	0/1:13,0:13:12.25:12,0,20	0/1:9,0:9:6.11:30,0,6
chr10	65378143	.	C	CGT	8863.38	PASS	AB=0.920;AC=36;AF=0.667;AN=54;BaseQRankSum=1.502;DP=598;FS=7.686;HRun=0;HaplotypeScore=118.9011;InbreedingCoeff=0.5985;MQ=49.03;MQ0=23;MQRankSum=2.862;QD=19.83;ReadPosRankSum=2.245;VQSLOD=4.9132;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:25,5:25:47.87:577,48,0	1/1:2,5:6:3.01:58,3,0	0/1:9,0:5:8.87:9,0,76	0/0:13,0:6:11.18:0,11,99	0/0:13,0:13:20.62:0,21,231	0/1:17,6:23:13.95:332,0,14	1/1:24,6:26:43.95:587,44,0	0/1:17,0:12:9.90:153,0,10	0/0:16,0:15:32.27:0,32,380	0/0:30,0:29:23.04:0,23,208	./.	1/1:17,1:17:30.09:418,30,0	0/0:16,0:16:40.36:0,40,519	1/1:19,4:23:45.57:661,46,0	1/1:8,0:8:13.93:159,14,0	1/1:5,8:13:9.50:186,9,0	1/1:29,7:34:61.54:920,62,0	1/1:21,14:34:83.21:1182,83,0	1/1:12,1:10:20.17:213,20,0	1/1:4,1:5:9.03:151,9,0	1/1:73,24:85:76.30:1868,76,0	1/1:10,3:11:8.98:119,9,0	0/0:14,0:14:36.12:0,36,512	0/0:40,0:41:99:0,105,1417	1/1:23,1:23:3.82:341,4,0	0/1:21,3:20:41.17:432,0,41	1/1:3,8:11:11.31:260,11,0	1/1:6,4:9:14.15:237,14,0
chr10	65378149	.	CGT	C	254.63	PASS	AB=0.900;AC=4;AF=0.074;AN=54;BaseQRankSum=3.675;DP=593;FS=13.944;HRun=0;HaplotypeScore=146.6668;InbreedingCoeff=-0.1039;MQ=48.64;MQ0=24;MQRankSum=-4.161;QD=3.80;ReadPosRankSum=-0.915;VQSLOD=2.1026;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:26:32.68:0,33,342	0/0:7,1:7:3.01:0,3,48	0/0:6,0:3:3.01:0,3,44	0/0:14,0:6:12.04:0,12,184	0/0:9,1:10:12.04:0,12,193	0/0:24,0:24:29.01:0,29,354	0/0:31,0:27:36.05:0,36,473	0/1:15,0:12:50.82:51,0,68	0/1:13,1:14:9.30:9,0,301	0/1:15,9:29:33.16:287,0,33	./.	0/0:19,0:18:31.92:0,32,465	0/0:15,1:16:27.09:0,27,404	0/0:23,0:23:45.13:0,45,613	0/1:8,0:8:7.50:8,0,57	0/0:11,0:11:8.86:0,9,103	0/0:35,0:33:60.33:0,60,716	0/0:40,0:39:22.78:0,23,871	0/0:17,0:12:12.08:0,12,274	0/0:5,0:5:9.02:0,9,109	0/0:91,1:81:71.83:0,72,1575	0/0:14,0:12:9.03:0,9,134	0/0:13,0:13:27.08:0,27,400	0/0:39,1:40:89.05:0,89,1295	0/0:21,1:21:15.09:0,15,234	0/0:26,0:22:37.55:0,38,438	0/0:11,0:11:18:0,18,200	0/0:10,0:9:9.03:0,9,145
chr10	65378151	.	T	TGC	2074.49	PASS	AB=0.942;AC=20;AF=0.370;AN=54;BaseQRankSum=0.872;DP=596;FS=6.639;HRun=0;HaplotypeScore=141.3187;InbreedingCoeff=-0.3701;MQ=47.26;MQ0=25;MQRankSum=3.221;QD=4.44;ReadPosRankSum=-3.127;VQSLOD=1.5744;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:28,2:25:9.23:258,0,9	0/0:8,0:7:2.22:0,2,7	0/0:6,0:3:8.89:0,9,82	0/0:15,0:5:12.04:0,12,168	0/0:10,0:10:18.03:0,18,233	0/1:23,0:23:49.35:54,0,49	0/1:31,1:29:93.12:96,0,93	0/1:10,6:13:31.72:153,0,32	0/0:14,0:14:32.92:0,33,386	0/1:31,0:30:17.04:17,0,99	./.	0/1:19,0:18:54.87:55,0,109	0/0:17,0:17:39.02:0,39,500	0/1:22,0:22:99:104,0,99	0/1:5,3:8:6.14:116,0,6	1/1:10,1:11:12.99:113,13,0	0/1:32,2:32:99:166,0,124	0/1:41,0:40:99:353,0,137	0/1:17,1:12:30.94:31,0,158	0/1:5,0:5:5:24,0,5	0/1:95,2:85:99:396,0,238	0/1:12,2:12:5.88:6,0,26	0/0:12,0:12:36.08:0,36,486	0/0:39,0:39:95.07:0,95,1333	0/1:21,2:22:29.08:92,0,29	0/1:25,0:21:99:101,0,167	0/1:11,1:12:30.49:84,0,30	0/1:6,0:5:7.85:14,0,8
chr10	65378194	.	GCGCT	G	337.11	PASS	AB=1.000;AC=3;AF=0.056;AN=54;BaseQRankSum=6.325;DP=519;FS=1.075;HRun=0;HaplotypeScore=127.4413;InbreedingCoeff=0.3226;MQ=48.74;MQ0=15;MQRankSum=-6.204;QD=6.48;ReadPosRankSum=0.772;VQSLOD=2.7836;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:20:29.84:0,30,735	0/0:5,0:5:0.47:0,0,1	0/0:32,0:2:4.96:0,5,23	0/0:25,0:3:5.94:0,6,41	0/0:5,0:5:6.02:0,6,151	0/0:14,0:14:23.91:0,24,593	0/0:33,0:30:59.66:0,60,1521	0/0:8,0:8:9.02:0,9,168	0/0:10,0:10:24.08:0,24,604	1/1:16,5:20:3.53:413,4,0	./.	0/0:17,0:17:39.61:0,40,1045	0/0:8,0:8:24.08:0,24,609	0/0:19,0:19:48.16:0,48,1273	0/0:5,0:5:8.93:0,9,246	0/0:8,0:8:5.84:0,6,108	0/0:26,0:25:35.61:0,36,1446	0/1:31,0:30:10.78:11,0,1886	0/0:12,0:12:25.86:0,26,555	0/0:3,0:3:6.02:0,6,164	0/0:88,1:85:99:0,126,3251	0/0:13,0:13:9.03:0,9,235	0/0:12,0:12:33.11:0,33,797	0/0:44,0:44:99:0,108,2868	0/0:17,0:15:27.01:0,27,737	0/0:21,2:22:57.20:0,57,1511	0/0:7,0:7:15.05:0,15,408	0/0:5,0:4:5.76:0,6,127
chr10	65378196	.	GCT	G	211.05	PASS	AB=1.000;AC=5;AF=0.093;AN=54;BaseQRankSum=7.155;DP=502;FS=3.513;HRun=0;HaplotypeScore=112.4002;InbreedingCoeff=0.4042;MQ=48.92;MQ0=13;MQRankSum=-7.137;QD=4.49;ReadPosRankSum=-0.430;VQSLOD=2.5506;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:20:29.67:0,30,509	1/1:3,1:4:2.27:9,2,0	0/0:33,1:2:5.96:0,6,50	0/0:23,0:3:5.96:0,6,45	0/0:4,1:5:6.02:0,6,102	0/0:15,0:15:24.04:0,24,399	0/0:30,1:29:59.92:0,60,1041	0/0:7,0:7:6.02:0,6,94	0/0:10,0:10:24.07:0,24,413	1/1:14,3:17:25.94:288,26,0	./.	0/0:17,0:17:39.60:0,40,728	0/0:9,0:9:27.07:0,27,439	0/0:17,0:17:48.16:0,48,857	0/0:5,0:5:8.94:0,9,173	0/0:7,0:7:3.01:0,3,58	0/1:26,0:25:24.38:24,0,931	0/0:30,0:29:3.92:0,4,1278	0/0:12,0:12:19.37:0,19,381	0/0:3,0:3:6.02:0,6,115	0/0:82,2:82:99:0,129,2284	0/0:12,0:12:9.03:0,9,162	0/0:12,0:12:33.04:0,33,509	0/0:42,1:43:99:0,111,2036	0/0:17,0:15:27.07:0,27,520	0/0:22,0:21:57.19:0,57,1054	0/0:7,0:7:15.05:0,15,287	0/0:5,0:4:5.77:0,6,87
chr10	65378197	.	CTCGTGT	C	320.01	PASS	AB=0.921;AC=5;AF=0.093;AN=54;BaseQRankSum=6.311;DP=500;FS=6.906;HRun=0;HaplotypeScore=138.4045;InbreedingCoeff=0.0802;MQ=49.12;MQ0=12;MQRankSum=-6.545;QD=4.05;ReadPosRankSum=-0.649;VQSLOD=1.7124;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:20:30.10:0,30,813	1/1:5,0:5:2.24:9,2,0	0/0:33,0:2:6.01:0,6,83	0/0:23,0:3:6:0,6,62	0/0:5,0:5:6.02:0,6,154	0/0:15,0:15:24.07:0,24,724	0/0:31,0:29:59.84:0,60,2000	0/0:6,0:6:6.02:0,6,106	0/0:10,0:10:27.09:0,27,889	0/1:15,0:17:74.08:244,0,74	./.	0/0:17,0:17:39.61:0,40,1372	0/0:9,0:9:27.09:0,27,978	0/0:17,0:17:48.16:0,48,1626	0/0:5,0:5:8.93:0,9,331	0/0:6,0:6:3.01:0,3,113	0/1:25,2:26:99:108,0,1800	0/1:28,2:29:64.66:65,0,2502	0/0:12,0:12:27.04:0,27,751	0/0:3,0:3:6.02:0,6,222	0/0:83,2:83:99:0,129,4305	0/0:12,0:12:9.03:0,9,269	0/0:12,0:12:33.10:0,33,989	0/0:43,0:43:99:0,111,3997	0/0:17,0:15:27.05:0,27,1005	0/0:22,0:21:57.20:0,57,2051	0/0:7,0:7:15.05:0,15,555	0/0:4,0:4:8.77:0,9,170
chr10	65378229	.	C	CGCGT	4433.75	PASS	AB=0.941;AC=31;AF=0.646;AN=48;BaseQRankSum=0.612;DP=453;FS=0.000;HRun=0;HaplotypeScore=95.0492;InbreedingCoeff=0.7062;MQ=42.70;MQ0=20;MQRankSum=-0.696;QD=15.95;ReadPosRankSum=0.586;VQSLOD=4.3344;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,3:12:6.02:121,6,0	1/1:4,2:5:2.99:40,3,0	0/0:26,0:4:8.99:0,9,108	0/0:29,0:4:9.03:0,9,135	0/0:8,0:8:12.04:0,12,196	1/1:8,1:9:4.56:40,5,0	1/1:29,5:30:41.74:720,42,0	./.	0/0:14,0:14:33.08:0,33,510	1/1:8,0:8:5.87:75,6,0	./.	1/1:7,4:11:17.95:281,18,0	0/0:10,0:10:24.05:0,24,374	1/1:8,2:10:9.03:196,9,0	1/1:3,1:3:6.02:92,6,0	./.	1/1:22,2:23:31.10:461,31,0	1/1:20,4:25:47.25:781,47,0	1/1:7,2:5:5.81:87,6,0	0/0:3,1:4:0.47:0,0,1	1/1:64,15:71:56.43:929,56,0	./.	0/0:11,0:11:20.81:0,21,290	0/0:55,0:53:99:0,129,2095	1/1:12,1:12:14.91:168,15,0	0/1:15,1:11:3.91:147,0,4	1/1:10,0:10:17.82:220,18,0	1/1:0,2:2:3.01:76,3,0
chr10	65378245	.	TGCGTGC	T	934.06	PASS	AB=0.911;AC=27;AF=0.563;AN=48;BaseQRankSum=6.998;DP=447;FS=2.994;HRun=0;HaplotypeScore=99.2328;InbreedingCoeff=0.3707;MQ=37.59;MQ0=28;MQRankSum=-1.545;QD=3.63;ReadPosRankSum=-4.479;VQSLOD=0.8075;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:14,1:12:0.09:0,0,5	1/1:4,0:4:2.75:49,3,0	0/0:32,0:4:9.03:0,9,185	0/0:29,0:4:8.76:0,9,135	0/0:10,0:10:15.05:0,15,479	1/1:8,1:10:1.09:20,1,0	1/1:37,0:32:0.22:83,0,0	./.	0/0:13,0:13:27.09:0,27,933	0/0:9,0:8:0.79:0,1,131	./.	0/1:9,2:10:7.12:15,0,7	0/0:9,0:9:24.04:0,24,664	1/1:5,2:8:3.19:17,3,0	1/1:4,0:3:4.81:30,5,0	./.	0/1:18,3:22:5.43:130,0,5	1/1:15,2:16:1.08:159,1,0	0/1:8,0:6:1.45:17,0,1	1/1:2,1:3:0.47:1,0,0	0/1:78,4:72:82.19:82,0,119	./.	0/0:13,0:13:24.29:0,24,793	0/0:56,0:53:99:0,138,4423	1/1:10,0:8:5.46:49,5,0	1/1:10,2:8:18.03:249,18,0	1/1:5,4:9:13.76:161,14,0	1/1:1,0:1:2.98:22,3,0
chr10	65378249	.	TGC	T	58.01	PASS	AB=0.948;AC=8;AF=0.167;AN=48;BaseQRankSum=6.633;DP=439;FS=0.989;HRun=0;HaplotypeScore=87.6962;InbreedingCoeff=0.1438;MQ=37.08;MQ0=27;MQRankSum=-6.121;QD=0.91;ReadPosRankSum=0.128;VQSLOD=1.6926;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:14:4.64:0,5,76	1/1:5,1:5:2.68:18,3,0	0/0:31,0:3:6.02:0,6,90	0/0:30,0:4:5.91:0,6,72	0/0:10,0:10:15.05:0,15,281	0/0:8,0:8:1.55:0,2,4	0/0:33,1:29:26.92:0,27,326	./.	0/0:12,0:12:27.04:0,27,481	0/1:8,2:9:2.86:49,0,3	./.	0/0:11,0:10:12.43:0,12,158	0/0:8,0:8:21.02:0,21,350	0/0:7,1:8:8.98:0,9,130	0/0:3,0:2:2.97:0,3,20	./.	0/1:23,1:23:9.51:10,0,159	0/0:17,0:16:6.53:0,7,349	0/0:8,0:6:4.61:0,5,54	1/1:3,0:3:0.89:2,1,0	0/0:78,0:66:41.65:0,42,575	./.	0/0:13,0:13:24.87:0,25,458	0/0:57,1:55:99:0,141,2557	0/0:8,0:6:2.86:0,3,24	0/1:12,0:8:14.09:65,0,14	0/1:9,0:9:24.58:25,0,38	0/0:1,0:1:3.01:0,3,37
chr10	65378257	.	T	TGC	208.60	PASS	AB=0.994;AC=8;AF=0.167;AN=48;BaseQRankSum=5.737;DP=450;FS=8.496;HRun=0;HaplotypeScore=85.5099;InbreedingCoeff=0.1166;MQ=36.13;MQ0=30;MQRankSum=-5.238;QD=2.82;ReadPosRankSum=-0.032;VQSLOD=0.3933;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:20:2.90:0,3,44	0/0:7,0:6:2.98:0,3,21	0/0:33,0:2:5.99:0,6,63	0/0:32,0:3:5.98:0,6,56	0/0:13,0:13:21.06:0,21,299	0/0:8,0:8:1.25:0,1,3	0/0:30,0:25:11.61:0,12,160	./.	0/0:14,0:14:27.08:0,27,389	0/1:9,0:8:23.64:51,0,24	./.	0/0:11,0:10:5:0,5,86	0/0:8,0:8:21.04:0,21,278	0/0:8,0:8:5.96:0,6,75	./.	./.	0/1:24,1:24:66.72:99,0,67	0/0:16,0:13:10.30:0,10,243	0/1:11,0:8:28.20:52,0,28	0/1:4,0:4:0:0,0,0	0/0:76,4:68:26.58:0,27,353	1/1:10,0:10:2.90:16,3,0	0/0:13,0:13:27.05:0,27,364	0/0:59,0:56:99:0,144,2084	0/0:6,0:4:0:0,0,0	0/1:9,0:7:26.19:43,0,26	0/1:6,0:6:0.88:63,0,1	0/0:1,0:1:2.98:0,3,21
chr10	65378258	.	GTGCA	G	249.04	PASS	AB=0.982;AC=15;AF=0.300;AN=50;BaseQRankSum=6.768;DP=450;FS=0.000;HRun=0;HaplotypeScore=89.6432;InbreedingCoeff=0.2265;MQ=36.18;MQ0=28;MQRankSum=-4.363;QD=1.44;ReadPosRankSum=-1.458;VQSLOD=1.2124;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:19:2.33:0,2,47	1/1:7,0:6:3.01:34,3,0	0/0:35,0:2:3.01:0,3,50	0/0:34,0:3:5.61:0,6,73	0/0:13,1:14:24.08:0,24,533	0/0:9,0:9:0.47:0,0,1	0/0:29,1:25:4.10:0,4,123	./.	0/0:13,0:13:27.08:0,27,623	0/1:9,0:8:43.11:43,0,87	./.	0/0:10,0:9:9.91:0,10,120	0/0:8,0:8:17.99:0,18,461	0/0:8,0:8:5.75:0,6,41	0/0:2,0:2:1.73:0,2,5	./.	0/1:25,0:24:26.34:26,0,107	0/1:12,2:11:25.87:26,0,113	0/1:11,0:8:12.67:17,0,13	0/1:4,0:4:0:0,0,0	0/1:81,0:70:10.22:10,0,244	0/0:10,0:10:2.68:0,3,11	0/0:13,0:13:20.90:0,21,525	0/0:58,0:55:99:0,147,3531	0/1:6,0:4:0:0,0,0	1/1:9,0:7:17.83:155,18,0	1/1:6,0:6:8.39:54,8,0	1/1:1,0:1:2.98:22,3,0
chr10	65378260	.	GCA	G	159.95	PASS	AB=0.929;AC=16;AF=0.333;AN=48;BaseQRankSum=6.520;DP=449;FS=8.283;HRun=0;HaplotypeScore=87.7020;InbreedingCoeff=0.2704;MQ=36.38;MQ0=28;MQRankSum=-4.394;QD=0.87;ReadPosRankSum=-1.656;VQSLOD=0.4434;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,2:18:1.54:0,2,47	1/1:4,2:5:3.01:35,3,0	0/0:35,0:2:2.49:0,2,9	0/0:32,0:3:5.61:0,6,69	0/0:14,0:14:24.08:0,24,436	0/0:6,2:8:1.55:0,2,4	0/0:31,0:27:7.46:0,7,133	./.	0/0:13,0:13:27.08:0,27,467	0/1:7,2:8:29.03:29,0,61	./.	0/0:12,0:11:11.73:0,12,123	0/0:7,0:7:18.02:0,18,333	0/0:8,0:8:5.70:0,6,31	0/0:3,0:3:1.73:0,2,5	./.	0/1:26,0:25:0.59:1,0,102	0/1:13,1:11:16.70:17,0,118	0/1:12,0:9:20.08:24,0,20	1/1:4,0:4:0.89:2,1,0	0/1:77,3:70:2.35:2,0,261	1/1:10,0:10:2.37:8,2,0	0/0:10,2:12:20.95:0,21,402	0/0:58,0:55:99:0,147,2768	0/1:5,1:4:0:0,0,0	1/1:9,1:7:17.74:142,18,0	1/1:6,0:6:4.74:30,5,0	./.
chr10	65378262	.	ATGTGTGTGCG	A	2186.82	PASS	AB=0.909;AC=28;AF=0.583;AN=48;BaseQRankSum=7.371;DP=460;FS=1.370;HRun=0;HaplotypeScore=103.7861;InbreedingCoeff=0.5989;MQ=36.19;MQ0=30;MQRankSum=-3.443;QD=8.61;ReadPosRankSum=-4.178;VQSLOD=0.8257;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:17:2.62:43,3,0	1/1:7,0:6:2.74:15,3,0	0/0:35,0:1:2.99:0,3,24	0/0:34,0:4:5.97:0,6,79	0/0:14,0:14:21.07:0,21,685	0/1:6,2:9:0.65:19,0,1	1/1:26,5:27:8.64:108,9,0	0/0:4,0:1:2.22:0,2,7	0/0:13,0:13:24.08:0,24,884	0/0:12,0:11:12.05:0,12,179	./.	1/1:12,2:12:5.91:95,6,0	0/0:7,0:7:18.06:0,18,662	1/1:6,1:7:2.26:12,2,0	1/1:3,0:3:3.01:45,3,0	1/1:2,0:2:2.98:21,3,0	1/1:21,4:24:38.65:571,39,0	0/1:15,0:12:2.02:232,0,2	1/1:10,1:8:15.01:275,15,0	./.	1/1:80,1:72:34.58:351,35,0	1/1:11,0:11:3.01:64,3,0	0/0:12,0:11:18.06:0,18,568	0/0:57,0:54:99:0,129,4893	./.	1/1:7,2:6:8.38:273,8,0	1/1:7,1:8:11.23:228,11,0	./.
chr10	65378293	.	CGT	C	4050.87	PASS	AB=0.767;AC=34;AF=0.630;AN=54;BaseQRankSum=5.894;DP=545;FS=1.060;HRun=0;HaplotypeScore=93.1511;InbreedingCoeff=0.5589;MQ=39.43;MQ0=21;MQRankSum=1.617;QD=12.06;ReadPosRankSum=-0.901;VQSLOD=2.9938;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:14,5:18:1.68:36,2,0	1/1:5,1:5:2.90:16,3,0	0/0:37,0:4:12.04:0,12,190	0/0:52,0:8:17.97:0,18,247	0/0:16,0:16:30.04:0,30,428	1/1:1,10:11:3.82:74,4,0	1/1:17,16:32:35.89:448,36,0	0/0:13,0:11:27.06:0,27,425	0/0:10,0:10:21.07:0,21,352	0/1:11,0:10:1.31:1,0,11	./.	1/1:5,10:13:14.94:156,15,0	0/0:10,0:10:27.08:0,27,428	1/1:2,5:7:0.28:1,0,0	1/1:0,5:5:9.03:117,9,0	1/1:0,3:3:6.02:78,6,0	1/1:8,19:27:51.82:712,52,0	0/1:12,11:19:82.55:347,0,83	1/1:3,4:5:15.01:175,15,0	1/1:0,3:3:3.01:39,3,0	1/1:65,48:107:93.26:1155,93,0	1/1:6,5:11:3.01:39,3,0	0/0:9,0:8:12.04:0,12,197	0/0:54,0:53:99:0,120,2020	0/1:7,3:9:2.29:66,0,2	0/1:7,11:16:10.64:327,0,11	1/1:3,6:9:9.02:112,9,0	1/1:2,2:4:12.04:152,12,0
chr10	65378353	.	C	CGT	564.65	PASS	AB=0.968;AC=19;AF=0.339;AN=56;BaseQRankSum=6.695;DP=523;FS=4.766;HRun=0;HaplotypeScore=124.0538;InbreedingCoeff=0.0858;MQ=46.47;MQ0=17;MQRankSum=0.388;QD=1.66;ReadPosRankSum=5.456;VQSLOD=1.7121;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,1:21:3.44:0,3,65	0/1:5,0:4:0.16:1,0,0	0/0:23,0:2:5.93:0,6,40	0/0:29,0:6:1.42:0,1,134	0/0:12,0:12:21.01:0,21,335	1/1:7,2:9:7.21:53,7,0	0/1:37,0:37:9.70:10,0,118	0/0:2,0:1:3.01:0,3,41	0/0:8,0:8:24.06:0,24,340	0/0:5,0:3:6.02:0,6,77	0/1:4,0:4:0:0,0,0	1/1:6,0:6:6.76:33,7,0	0/0:7,0:7:21.07:0,21,339	0/1:15,0:15:38.25:38,0,59	0/0:8,0:8:5.33:0,5,101	1/1:4,0:4:5.79:30,6,0	0/1:24,2:25:61.82:89,0,62	0/1:25,0:24:62.79:63,0,109	0/1:6,1:7:31.11:31,0,88	0/1:6,0:6:12.66:13,0,16	0/1:163,0:155:99:215,0,370	0/0:13,0:12:3.01:0,3,47	0/0:6,0:7:15.05:0,15,230	0/0:44,0:44:99:0,114,1767	0/1:9,2:10:0.01:0,0,0	0/1:19,0:19:21.87:99,0,22	0/0:2,0:2:3.46:0,3,24	1/1:3,0:3:8.44:41,8,0
chr10	65378354	.	A	ATG	8729.71	PASS	AB=1.000;AC=36;AF=0.720;AN=50;BaseQRankSum=7.614;DP=532;FS=5.176;HRun=0;HaplotypeScore=100.9291;InbreedingCoeff=0.6918;MQ=46.39;MQ0=17;MQRankSum=0.826;QD=21.45;ReadPosRankSum=0.417;VQSLOD=5.1966;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,15:21:5.96:102,6,0	1/1:2,3:4:3.01:51,3,0	0/0:23,0:2:2.68:0,3,11	0/1:27,0:6:1.81:2,0,43	0/0:12,0:12:18.03:0,18,220	1/1:3,6:9:9.03:151,9,0	1/1:13,25:38:53.77:821,54,0	./.	0/0:8,0:8:21.05:0,21,257	./.	0/1:4,0:4:0:0,0,0	1/1:2,4:6:9.03:151,9,0	0/0:8,0:8:20.97:0,21,249	1/1:6,11:17:26.76:453,27,0	1/1:7,1:8:5.99:75,6,0	1/1:0,4:4:9.03:151,9,0	1/1:10,17:27:47.50:755,48,0	1/1:12,12:23:51.06:745,51,0	1/1:4,3:7:12.04:203,12,0	1/1:3,4:7:9.02:126,9,0	1/1:73,92:156:99:4014,268,0	./.	0/0:9,0:9:18.03:0,18,206	0/0:44,0:44:96.23:0,96,1205	1/1:3,8:10:3.01:51,3,0	1/1:5,14:20:48.11:731,48,0	1/1:3,0:3:3:25,3,0	1/1:1,2:3:9:123,9,0
chr10	65378449	.	TGC	T	4807.33	PASS	AB=0.988;AC=33;AF=0.611;AN=54;BaseQRankSum=6.954;DP=767;FS=41.215;HRun=0;HaplotypeScore=139.2889;InbreedingCoeff=0.3754;MQ=42.86;MQ0=24;MQRankSum=-0.220;QD=8.35;ReadPosRankSum=-0.107;VQSLOD=2.4170;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:26,1:25:11.87:88,12,0	0/1:11,0:10:17.63:58,0,18	0/0:29,0:4:8.92:0,9,64	0/0:40,0:10:22.02:0,22,194	0/0:12,0:12:27.04:0,27,351	1/1:15,0:15:11.88:83,12,0	1/1:53,1:45:14.58:372,15,0	0/1:13,0:5:6.92:7,0,48	0/0:29,0:29:61.97:0,62,1097	0/1:18,1:15:93.88:94,0,193	./.	0/1:27,0:22:7.59:57,0,8	0/0:12,0:10:26.61:0,27,363	0/1:20,0:17:31.17:31,0,45	1/1:8,0:8:13.14:86,13,0	1/1:8,0:8:8.86:66,9,0	1/1:44,1:43:74.45:655,74,0	0/1:30,1:30:99:362,0,105	0/1:12,0:9:14.59:82,0,15	1/1:10,0:10:5.95:43,6,0	1/1:200,0:180:99:2177,297,0	1/1:17,0:15:2.46:19,2,0	0/0:19,0:18:23.72:0,24,295	0/0:45,0:45:93.90:0,94,1585	1/1:17,0:16:8.52:73,9,0	1/1:27,1:23:16.78:352,17,0	1/1:5,0:4:2.97:20,3,0	1/1:8,0:7:11.89:82,12,0
chr10	65378453	.	CGCGT	C	10961.98	PASS	AB=0.766;AC=27;AF=0.500;AN=54;BaseQRankSum=-1.835;DP=769;FS=74.243;HRun=0;HaplotypeScore=135.7102;InbreedingCoeff=0.1264;MQ=42.39;MQ0=27;MQRankSum=4.825;QD=19.06;ReadPosRankSum=0.820;VQSLOD=1.3405;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:19,9:26:11.82:201,12,0	0/1:10,1:10:61.82:91,0,62	0/0:30,0:5:14.98:0,15,240	0/0:41,0:12:25.71:0,26,422	0/0:12,0:12:27.06:0,27,542	1/1:9,5:14:12.04:229,12,0	0/1:34,20:44:63:890,0,63	0/1:16,0:6:15.74:16,0,104	0/0:29,0:29:86.35:0,86,1914	0/1:15,3:14:99:105,0,270	./.	0/1:16,8:20:85.13:106,0,85	0/0:11,0:9:26.68:0,27,549	0/1:14,8:18:99:136,0,106	0/1:1,10:11:28.99:255,0,29	1/1:7,3:10:8.93:174,9,0	1/1:22,24:44:55.44:1631,55,0	0/1:16,14:29:99:938,0,162	0/1:5,7:10:21.62:227,0,22	1/1:1,9:10:6.02:119,6,0	1/1:125,69:173:99:5196,288,0	0/1:13,6:17:13.94:14,0,45	0/0:17,0:16:23.84:0,24,444	0/0:43,0:43:99:0,108,2506	1/1:11,6:16:8.61:73,9,0	0/1:25,6:25:99:446,0,144	0/0:5,1:5:5.83:0,6,34	1/1:6,1:6:11.93:117,12,0
chr10	65378499	.	CGT	C	471.11	PASS	AB=0.896;AC=13;AF=0.241;AN=54;BaseQRankSum=5.132;DP=798;FS=66.939;HRun=0;HaplotypeScore=141.9044;InbreedingCoeff=-0.2008;MQ=40.78;MQ0=50;MQRankSum=-4.359;QD=1.53;ReadPosRankSum=-1.933;VQSLOD=0.0494;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,2:27:11.70:0,12,199	0/0:7,0:6:3.01:0,3,34	0/0:23,0:6:18.06:0,18,235	0/0:34,0:5:12.91:0,13,157	0/0:11,0:10:21.06:0,21,363	0/1:13,4:17:26.57:27,0,246	0/1:60,2:48:6.58:7,0,1094	0/1:22,0:14:18.39:18,0,122	0/0:26,0:26:50.56:0,51,850	0/1:20,1:11:40.02:40,0,57	./.	0/1:26,11:30:99:200,0,427	0/0:17,0:16:40.65:0,41,656	0/1:18,5:16:61.96:62,0,167	0/1:15,0:14:22.74:23,0,300	0/0:11,1:11:8.84:0,9,130	0/1:35,2:35:27.95:28,0,862	0/0:29,1:27:24.22:0,24,954	0/0:15,1:10:30.06:0,30,512	0/0:4,1:5:6.01:0,6,86	0/0:185,14:181:99:0,272,5313	1/1:16,5:16:3.01:46,3,0	0/0:7,0:4:6.02:0,6,116	0/0:47,0:43:99:0,100,1713	0/0:19,0:18:15.03:0,15,226	0/1:35,3:28:60.77:61,0,803	0/1:6,2:6:48.09:82,0,48	0/1:5,1:4:25.95:26,0,144
chr10	65378503	.	CGT	C	234.14	PASS	AB=0.948;AC=6;AF=0.115;AN=52;BaseQRankSum=3.499;DP=781;FS=5.910;HRun=0;HaplotypeScore=135.1528;InbreedingCoeff=0.1711;MQ=40.82;MQ0=51;MQRankSum=-4.779;QD=2.46;ReadPosRankSum=-0.289;VQSLOD=1.5680;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:23:11.71:0,12,195	./.	0/0:24,0:5:3.01:0,3,45	0/0:35,0:4:2.98:0,3,21	0/0:12,0:11:24.08:0,24,355	0/0:17,0:17:16.71:0,17,238	0/0:61,0:48:25.43:0,25,879	1/1:10,6:11:18.05:215,18,0	0/0:26,0:24:48.80:0,49,724	0/1:18,2:11:28.68:29,0,34	./.	0/0:39,0:30:12.73:0,13,345	0/0:18,0:17:41.84:0,42,627	0/0:23,0:16:13.17:0,13,196	0/1:14,1:14:21.36:21,0,182	0/0:11,0:10:8.86:0,9,138	0/1:33,2:33:80.16:80,0,620	0/0:29,0:26:29.61:0,30,810	0/0:16,0:9:27.04:0,27,410	0/0:6,0:5:3.01:0,3,50	0/0:193,2:176:99:0,227,4004	0/0:20,0:15:0.47:0,0,1	0/0:7,0:5:8.86:0,9,114	0/0:47,0:43:90.26:0,90,1387	0/0:20,0:19:15.04:0,15,210	0/0:35,0:27:49.63:0,50,718	0/1:9,0:7:11.47:11,0,42	0/0:6,0:4:9:0,9,121
chr10	65378522	.	G	GTGCA	70.90	PASS	AB=0.957;AC=5;AF=0.096;AN=52;BaseQRankSum=4.393;DP=730;FS=8.292;HRun=0;HaplotypeScore=135.2791;InbreedingCoeff=0.0483;MQ=40.30;MQ0=47;MQRankSum=-3.607;QD=0.93;ReadPosRankSum=-1.820;VQSLOD=1.6529;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:24:12.04:0,12,232	./.	0/0:16,0:1:3.01:0,3,58	0/0:25,0:1:3.01:0,3,39	0/0:15,0:14:18.06:0,18,333	0/0:15,0:15:11.67:0,12,232	0/0:53,0:41:57.05:0,57,1105	0/0:15,0:9:18.03:0,18,225	0/0:26,0:25:57.07:0,57,977	0/0:17,0:8:11.97:0,12,170	./.	0/1:35,2:27:50.19:50,0,493	0/0:22,0:21:48.16:0,48,925	0/0:19,1:14:11.66:0,12,232	0/0:18,0:16:14.96:0,15,291	0/1:11,1:10:60.04:60,0,162	0/0:27,0:24:43.32:0,43,829	0/0:25,0:22:9.69:0,10,977	0/0:15,0:9:24.08:0,24,440	0/0:3,0:2:3.01:0,3,58	0/0:182,5:162:99:0,267,4910	1/1:18,0:12:1.25:3,1,0	0/0:10,0:8:18.06:0,18,325	0/0:46,1:44:99:0,99,1789	0/0:18,0:17:18.06:0,18,333	0/0:36,0:25:60.05:0,60,1029	0/1:9,0:8:49.41:58,0,49	0/0:5,0:4:9.02:0,9,143
chr10	65378571	.	CGT	C	842.64	PASS	AB=0.955;AC=21;AF=0.389;AN=54;BaseQRankSum=0.108;DP=739;FS=6.808;HRun=0;HaplotypeScore=115.9545;InbreedingCoeff=0.1356;MQ=38.09;MQ0=30;MQRankSum=2.986;QD=2.05;ReadPosRankSum=-0.334;VQSLOD=1.8631;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:32,0:30:0.47:26,0,0	0/0:3,0:3:2.80:0,3,13	0/0:63,0:13:24.06:0,24,360	0/0:84,0:16:36.06:0,36,485	0/0:20,0:19:33.05:0,33,448	0/1:7,1:8:1.19:32,0,1	0/1:41,1:35:8.26:46,0,8	1/1:10,8:10:26.70:284,27,0	0/0:28,0:28:66.21:0,66,1078	1/1:5,0:4:0.68:22,1,0	./.	0/1:27,0:23:36.26:36,0,42	0/0:17,0:17:41.70:0,42,593	1/1:20,0:20:1.49:4,1,0	0/1:16,1:16:2.12:15,0,2	0/0:14,0:13:3.59:0,4,26	0/0:24,0:23:19.63:0,20,98	0/1:21,0:20:19.80:49,0,20	1/1:6,0:6:0.78:13,1,0	0/0:2,0:2:0:0,0,0	0/1:157,2:143:59.64:312,0,60	1/1:12,0:11:3.01:38,3,0	0/0:14,0:14:33.07:0,33,472	0/0:55,0:55:99:0,132,2169	0/1:19,2:20:40.23:45,0,40	0/1:15,2:16:50.10:64,0,50	0/1:5,0:5:5.21:5,0,48	0/0:4,0:4:2.37:0,2,8
chr10	65378586	.	GCA	G	564.27	PASS	AB=0.950;AC=21;AF=0.389;AN=54;BaseQRankSum=3.071;DP=683;FS=3.556;HRun=0;HaplotypeScore=113.3532;InbreedingCoeff=0.1553;MQ=37.22;MQ0=34;MQRankSum=-1.045;QD=1.54;ReadPosRankSum=-4.605;VQSLOD=0.0847;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:27,1:26:1.19:18,0,1	1/1:4,0:4:2.66:13,3,0	0/0:55,0:11:29.93:0,30,399	0/0:76,1:17:21.57:0,22,497	0/0:20,0:19:34:0,34,554	1/1:8,0:8:2.28:39,2,0	0/1:29,2:24:9.05:55,0,9	0/1:15,0:8:18.97:19,0,36	0/0:27,0:27:68.97:0,69,1312	0/0:8,0:7:17.68:0,18,191	./.	0/1:27,0:22:28.11:28,0,37	0/0:15,0:15:41.01:0,41,617	1/1:21,0:19:0.94:2,1,0	0/0:17,0:16:0.89:0,1,2	1/1:13,0:13:0.45:2,0,0	0/0:20,1:20:24.72:0,25,101	0/1:17,1:17:39.05:63,0,39	1/1:5,0:4:3.87:25,4,0	0/0:2,0:2:0:0,0,0	0/1:130,17:127:34.05:273,0,34	1/1:14,0:13:5.69:46,6,0	0/0:12,0:12:27.09:0,27,538	0/0:58,0:58:99:0,144,2622	0/1:17,0:16:6.91:36,0,7	0/1:14,0:12:45.94:66,0,46	0/0:5,0:4:8.04:0,8,61	0/1:3,1:4:6.40:30,0,6
chr10	65378587	.	C	CGT	426.90	PASS	AB=0.956;AC=24;AF=0.444;AN=54;BaseQRankSum=7.652;DP=684;FS=16.999;HRun=0;HaplotypeScore=114.9054;InbreedingCoeff=0.3934;MQ=37.46;MQ0=34;MQRankSum=1.588;QD=1.15;ReadPosRankSum=1.910;VQSLOD=1.3750;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:26:14.97:74,15,0	0/1:4,0:4:20.68:28,0,21	0/0:55,0:11:21.56:0,22,308	0/0:76,0:17:38.13:0,38,466	0/0:19,0:18:36.10:0,36,488	0/1:6,3:9:0.97:1,0,14	1/1:30,1:24:7.45:50,7,0	0/0:15,0:8:19.33:0,19,169	0/0:29,0:29:71.24:0,71,1060	0/0:8,0:7:18.06:0,18,249	./.	1/1:22,5:22:8.80:97,9,0	0/0:17,0:17:38.94:0,39,538	1/1:19,0:18:5.38:40,5,0	1/1:18,0:17:1.45:5,1,0	0/1:13,0:13:1.42:5,0,1	0/1:20,0:19:25.75:26,0,55	0/1:16,0:16:50.76:51,0,84	1/1:4,0:3:2.37:8,2,0	0/0:2,0:2:0:0,0,0	0/1:141,2:129:10.73:129,0,11	1/1:13,1:13:0.60:25,1,0	0/0:12,0:12:27.09:0,27,435	0/0:56,1:57:99:0,144,2196	0/0:16,1:16:7.39:0,7,38	1/1:15,0:13:5.41:44,5,0	0/0:5,0:4:3.47:0,3,29	1/1:4,0:4:3.38:12,3,0
chr10	65378588	.	A	ATG	1031.44	PASS	AB=0.950;AC=28;AF=0.519;AN=54;BaseQRankSum=7.157;DP=707;FS=10.277;HRun=0;HaplotypeScore=117.4495;InbreedingCoeff=0.4307;MQ=37.18;MQ0=36;MQRankSum=0.988;QD=2.22;ReadPosRankSum=0.179;VQSLOD=1.8792;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:27:16.14:104,16,0	0/1:4,0:4:24.87:31,0,25	0/1:52,0:9:2.28:2,0,106	0/0:74,0:16:23.64:0,24,268	0/0:18,0:18:33.10:0,33,406	0/1:10,0:10:1.77:2,0,13	1/1:30,2:25:7.62:56,8,0	0/1:11,4:8:1.76:72,0,2	0/0:29,0:29:62.93:0,63,778	0/0:10,0:8:17.57:0,18,223	./.	1/1:28,2:25:11.77:138,12,0	0/0:16,0:16:27.08:0,27,340	1/1:19,2:18:5.81:51,6,0	1/1:16,4:18:1.67:6,2,0	1/1:11,2:13:5.85:21,6,0	0/1:18,2:19:46.83:127,0,47	0/1:17,0:16:78.48:80,0,78	1/1:5,0:4:5.61:46,6,0	0/0:3,0:3:0:0,0,0	1/1:153,5:133:19.18:301,19,0	1/1:12,2:13:3.01:38,3,0	0/0:12,0:12:27.09:0,27,347	0/0:56,0:56:99:0,129,1609	0/0:17,0:16:3.31:0,3,19	1/1:17,3:16:11.63:114,12,0	0/0:4,1:4:3:0,3,28	1/1:4,0:4:4.72:18,5,0
chr10	65378629	.	C	CGT	37.71	PASS	AB=0.998;AC=17;AF=0.315;AN=54;BaseQRankSum=5.070;DP=685;FS=26.684;HRun=0;HaplotypeScore=109.2267;InbreedingCoeff=-0.0297;MQ=38.09;MQ0=69;MQRankSum=-1.625;QD=0.15;ReadPosRankSum=5.015;VQSLOD=0.0887;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:21,0:16:14.13:14,0,27	1/1:5,0:5:1.81:5,2,0	0/0:47,0:2:5.98:0,6,66	0/0:59,0:7:5.40:0,5,39	0/0:19,0:17:39.12:0,39,558	0/1:11,0:11:8.71:9,0,37	0/1:37,1:32:28.86:39,0,29	0/0:17,0:12:27.06:0,27,361	0/0:36,0:36:92.53:0,93,1204	0/0:11,0:7:7.09:0,7,93	./.	0/1:37,0:30:22.74:23,0,127	0/0:23,0:22:63.16:0,63,867	1/1:15,0:13:2.04:6,2,0	0/0:17,1:16:3.01:0,3,43	0/1:20,0:19:2.93:3,0,30	0/1:14,0:12:26.95:27,0,224	0/1:19,0:16:14.30:14,0,144	0/1:9,0:3:11.38:11,0,40	0/1:7,0:7:0.01:0,0,0	0/0:122,2:104:31.60:0,32,432	1/1:15,0:11:1.55:4,2,0	0/0:13,0:13:33.07:0,33,460	0/0:58,1:58:99:0,135,1935	0/1:8,0:6:0:0,0,0	0/1:31,0:21:12.34:12,0,264	0/0:6,0:3:3.01:0,3,35	0/0:3,0:3:2.92:0,3,18
chr10	65378631	.	C	CGT	2152.02	PASS	AB=0.816;AC=25;AF=0.481;AN=52;BaseQRankSum=0.229;DP=704;FS=0.000;HRun=0;HaplotypeScore=101.7388;InbreedingCoeff=0.3431;MQ=37.83;MQ0=69;MQRankSum=-1.278;QD=5.62;ReadPosRankSum=1.021;VQSLOD=3.0225;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,8:15:13.84:180,14,0	1/1:4,1:5:3.01:50,3,0	0/0:49,0:4:5.96:0,6,56	0/0:61,0:7:5.29:0,5,46	0/0:20,0:18:36.10:0,36,442	1/1:6,6:12:5.74:100,6,0	1/1:15,21:33:26.89:448,27,0	0/0:18,0:12:23.10:0,23,322	0/0:37,0:37:74.62:0,75,839	0/0:10,0:6:2.72:0,3,67	./.	0/1:20,15:32:20.51:233,0,21	0/0:23,0:22:55.97:0,56,667	1/1:11,5:14:3.01:50,3,0	0/0:12,5:16:3.01:0,3,38	1/1:10,9:20:11.91:193,12,0	0/1:11,2:12:37.98:38,0,85	1/1:13,5:15:8.64:272,9,0	0/1:11,1:4:28.90:81,0,29	1/1:4,3:7:6:75,6,0	0/1:102,19:106:14.25:254,0,14	1/1:6,9:13:6.02:100,6,0	0/0:12,0:13:4.15:0,4,251	0/0:57,1:57:99:0,114,1412	0/0:4,4:6:0:0,0,0	0/1:25,7:20:22.14:223,0,22	./.	1/1:3,0:4:2.47:23,2,0
chr10	65378665	.	C	CGT	1651.58	PASS	AB=0.962;AC=30;AF=0.600;AN=50;BaseQRankSum=7.460;DP=572;FS=7.588;HRun=0;HaplotypeScore=102.3912;InbreedingCoeff=0.4993;MQ=39.87;MQ0=23;MQRankSum=-1.710;QD=5.34;ReadPosRankSum=-2.074;VQSLOD=1.3214;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,2:13:4.57:55,5,0	./.	0/0:48,0:12:18.01:0,18,196	0/0:53,1:11:11.39:0,11,101	0/0:14,0:14:20.94:0,21,229	0/1:9,2:11:32.47:35,0,32	1/1:25,2:26:14.83:218,15,0	1/1:10,1:9:9.03:118,9,0	0/0:32,0:32:60.18:0,60,747	0/1:6,0:5:40.33:40,0,45	./.	1/1:26,5:28:5.82:73,6,0	0/0:29,0:28:57.17:0,57,704	1/1:17,3:18:3:42,3,0	1/1:7,2:8:2.52:41,3,0	1/1:17,3:19:12.03:148,12,0	1/1:11,0:11:14.60:108,15,0	1/1:14,0:12:16:121,16,0	1/1:10,0:9:0.89:2,1,0	1/1:3,2:5:3.01:50,3,0	1/1:86,7:81:41.82:591,42,0	./.	0/0:9,0:9:24.07:0,24,296	0/0:49,0:49:94.52:0,95,1182	0/0:6,0:5:0:0,0,0	1/1:15,4:15:2.88:162,3,0	0/1:3,0:3:0:0,0,0	0/1:3,0:3:15.99:16,0,32
chr10	65378675	.	TGC	T	1790.81	PASS	AB=0.802;AC=31;AF=0.574;AN=54;BaseQRankSum=8.745;DP=561;FS=1.180;HRun=0;HaplotypeScore=90.0593;InbreedingCoeff=0.4786;MQ=39.03;MQ0=20;MQRankSum=-0.992;QD=5.33;ReadPosRankSum=-1.032;VQSLOD=2.4361;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,5:13:3.47:26,3,0	0/1:6,3:8:0:0,0,0	0/0:42,0:9:20.94:0,21,259	0/0:38,0:5:14.57:0,15,141	0/0:12,0:12:30.01:0,30,433	0/1:5,4:9:32.11:39,0,32	1/1:19,6:25:16.44:132,16,0	0/1:12,2:10:91.18:91,0,138	0/0:29,0:28:60.24:0,60,1181	0/1:9,0:6:3.68:4,0,52	0/0:4,0:2:0:0,0,0	1/1:19,15:29:6.02:90,6,0	0/0:24,0:24:64.13:0,64,1076	1/1:12,8:15:3.01:45,3,0	1/1:5,5:9:3:42,3,0	1/1:8,12:18:12.04:180,12,0	1/1:12,4:15:16.25:200,16,0	1/1:9,7:14:26.07:245,26,0	1/1:4,3:6:4.56:31,5,0	1/1:3,3:6:1.25:3,1,0	1/1:65,33:87:46.99:622,47,0	./.	0/0:15,0:15:29.19:0,29,544	0/0:50,0:50:98.79:0,99,1929	0/1:4,2:4:0:0,0,0	1/1:11,4:12:14.49:156,14,0	0/1:2,1:3:0:0,0,0	0/1:3,1:4:45.99:55,0,46
chr10	65378677	.	CGTGCGT	C	42.05	PASS	AB=0.989;AC=12;AF=0.222;AN=54;BaseQRankSum=4.085;DP=556;FS=1.095;HRun=0;HaplotypeScore=112.3441;InbreedingCoeff=0.1112;MQ=38.66;MQ0=23;MQRankSum=-2.271;QD=0.28;ReadPosRankSum=-2.990;VQSLOD=1.7439;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:13:2.88:0,3,24	0/1:9,0:8:0:0,0,0	0/0:40,0:8:17.84:0,18,267	0/0:36,0:5:11.93:0,12,214	0/0:12,0:12:27.09:0,27,813	0/0:7,0:7:5.78:0,6,93	0/1:21,2:23:4.20:4,0,132	0/0:15,0:11:7.72:0,8,526	0/0:29,0:28:72.25:0,72,2342	0/0:10,0:7:12.03:0,12,187	0/1:5,0:2:0:0,0,0	0/1:32,1:28:23.22:23,0,38	0/0:23,0:23:66.08:0,66,2071	0/0:21,0:16:3.01:0,3,51	1/1:10,0:9:3.39:17,3,0	0/1:20,0:18:7.28:7,0,137	0/0:18,0:17:22.81:0,23,253	0/1:17,0:15:40.10:40,0,216	0/1:7,0:5:10.97:39,0,11	0/0:6,0:6:3.01:0,3,43	0/0:91,7:88:45.98:0,46,697	./.	0/0:15,0:15:39.13:0,39,1182	0/0:46,0:47:99:0,120,3753	0/1:6,0:4:0:0,0,0	0/1:15,0:11:28.66:29,0,205	0/1:3,0:3:0:0,0,0	0/0:4,0:4:9.02:0,9,148
chr10	65378680	.	GCGTGC	G	99.90	PASS	AB=0.970;AC=7;AF=0.130;AN=54;BaseQRankSum=3.388;DP=549;FS=4.514;HRun=0;HaplotypeScore=107.0505;InbreedingCoeff=0.2677;MQ=38.64;MQ0=22;MQRankSum=-2.269;QD=2.13;ReadPosRankSum=0.998;VQSLOD=1.3206;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:12:3.01:0,3,72	0/0:9,0:8:0:0,0,0	0/0:36,0:7:18.05:0,18,287	0/0:35,0:4:12.03:0,12,216	0/0:12,0:11:27.09:0,27,743	0/0:7,0:7:5.91:0,6,73	0/0:22,0:22:11.88:0,12,253	0/0:13,0:10:24.08:0,24,572	0/0:29,0:28:72.25:0,72,2125	0/0:11,0:7:12.04:0,12,230	0/1:5,0:2:0:0,0,0	0/0:33,0:28:4.02:0,4,55	0/0:24,0:24:68.79:0,69,1936	0/0:19,0:14:3.01:0,3,53	1/1:9,0:8:0.47:1,0,0	0/0:18,0:16:9.03:0,9,156	0/0:19,1:18:27.42:0,27,363	0/1:14,3:15:99:171,0,240	0/1:7,0:4:10.50:11,0,13	0/0:7,0:7:3.01:0,3,85	0/0:99,2:89:57.02:0,57,948	./.	0/0:15,0:15:39.13:0,39,1102	0/0:49,0:49:99:0,120,3518	0/1:6,0:4:0:0,0,0	0/0:15,0:11:19.59:0,20,322	0/1:3,0:3:0.03:0,0,0	0/0:4,0:4:9.03:0,9,148
chr10	65378685	.	CGT	C	597.72	PASS	AB=0.903;AC=18;AF=0.375;AN=48;BaseQRankSum=7.055;DP=577;FS=0.000;HRun=0;HaplotypeScore=94.1115;InbreedingCoeff=0.3406;MQ=36.93;MQ0=26;MQRankSum=0.269;QD=2.07;ReadPosRankSum=2.660;VQSLOD=1.6678;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/1:8,1:8:0:0,0,0	0/0:33,0:4:1.25:0,1,3	0/0:32,0:3:6.01:0,6,61	0/0:13,0:12:24.08:0,24,389	1/1:5,0:5:2.97:27,3,0	1/1:22,1:23:5.84:50,6,0	0/0:14,0:10:21.07:0,21,327	0/0:32,0:30:68.70:0,69,1054	0/1:11,2:9:29.44:29,0,42	0/0:6,1:2:0:0,0,0	1/1:30,5:30:2.79:13,3,0	0/0:25,0:25:42.70:0,43,926	1/1:16,1:14:3:29,3,0	0/0:6,1:7:0:0,0,0	1/1:18,0:16:8.56:58,9,0	0/1:17,5:20:42.62:50,0,43	0/1:15,2:16:55.75:86,0,56	0/0:7,0:4:0.19:0,0,3	./.	1/1:104,6:95:47.02:388,47,0	./.	0/0:15,0:15:37.65:0,38,535	0/0:53,1:54:72.83:0,73,1597	./.	0/1:15,1:12:5.18:5,0,83	0/0:5,0:4:2.84:0,3,15	0/1:4,0:4:0.58:1,0,1
chr10	65378699	.	CGT	C	1482.59	PASS	AB=0.888;AC=21;AF=0.457;AN=46;BaseQRankSum=7.688;DP=604;FS=1.116;HRun=0;HaplotypeScore=105.0943;InbreedingCoeff=0.3642;MQ=36.97;MQ0=29;MQRankSum=-3.618;QD=4.62;ReadPosRankSum=-0.341;VQSLOD=2.7852;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	0/0:25,0:5:12:0,12,164	0/0:13,0:12:24.08:0,24,408	0/1:5,0:5:19.76:23,0,20	1/1:23,2:23:5.04:38,5,0	0/0:22,0:16:36.12:0,36,578	0/0:29,0:29:66.22:0,66,1066	0/0:18,0:13:4.02:0,4,130	0/0:8,0:4:3.01:0,3,47	1/1:31,5:29:11.90:123,12,0	0/0:26,0:26:46.77:0,47,842	1/1:16,1:12:3.01:31,3,0	0/0:7,1:7:0:0,0,0	1/1:14,1:13:8.73:64,9,0	0/1:21,5:24:26.01:203,0,26	0/1:19,2:20:41.22:210,0,41	1/1:11,0:6:9.61:86,10,0	./.	1/1:108,11:102:67.55:647,68,0	./.	0/0:15,0:14:34.92:0,35,542	0/0:55,0:55:99:0,113,1792	1/1:11,1:9:2.88:15,3,0	0/1:15,2:16:46.44:167,0,46	0/1:7,2:9:4.47:18,0,4	1/1:4,0:4:2.39:16,2,0
chr10	65378706	.	GTGCA	G	212.04	PASS	AB=0.977;AC=13;AF=0.250;AN=52;BaseQRankSum=4.492;DP=633;FS=48.733;HRun=0;HaplotypeScore=124.9414;InbreedingCoeff=0.1024;MQ=36.93;MQ0=31;MQRankSum=-2.273;QD=1.23;ReadPosRankSum=-1.924;VQSLOD=0.3648;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:22,1:20:2.88:36,3,0	1/1:8,0:7:2.50:9,2,0	./.	0/0:24,0:6:15.03:0,15,275	0/0:12,0:11:24.08:0,24,640	0/0:6,0:6:3.47:0,3,29	0/0:23,0:20:5.76:0,6,51	0/0:23,0:17:39.13:0,39,968	0/0:28,0:26:63.11:0,63,1464	0/0:19,0:14:12.44:0,12,335	0/0:9,0:5:2.64:0,3,81	0/0:37,0:30:17.19:0,17,180	0/1:23,4:27:4.21:4,0,1210	0/0:17,1:12:1.40:0,1,24	0/1:9,0:7:0:0,0,0	0/0:16,0:13:11.73:0,12,88	0/1:30,1:27:84.59:85,0,578	0/1:22,0:22:55.86:56,0,489	0/1:16,0:7:32.99:64,0,33	./.	0/0:127,0:106:71.30:0,71,665	0/0:14,0:13:3.01:0,3,35	0/0:15,0:14:25.82:0,26,763	0/0:53,1:54:99:0,122,2984	1/1:11,1:9:2.97:20,3,0	0/1:20,0:17:38.63:39,0,277	0/0:11,0:9:8.58:0,9,96	0/1:4,0:4:19.39:32,0,19
chr10	65378708	.	GCA	G	322.87	PASS	AB=0.939;AC=16;AF=0.296;AN=54;BaseQRankSum=3.414;DP=639;FS=48.751;HRun=0;HaplotypeScore=110.5862;InbreedingCoeff=0.0133;MQ=36.77;MQ0=30;MQRankSum=-1.350;QD=1.31;ReadPosRankSum=-1.377;VQSLOD=0.1215;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:18,5:20:2.98:37,3,0	1/1:7,1:7:2.50:9,2,0	0/0:14,2:2:6.02:0,6,90	0/0:24,1:7:14.91:0,15,219	0/0:12,0:11:24.08:0,24,464	0/1:5,2:7:0.60:1,0,15	0/0:22,1:20:2.44:0,2,17	0/0:22,0:17:39.13:0,39,737	0/0:27,0:25:63.06:0,63,1099	0/1:17,1:14:24.94:25,0,239	0/0:8,0:5:3.01:0,3,61	0/1:36,3:31:6.01:6,0,114	0/1:26,1:27:35.91:36,0,875	0/1:17,1:12:12.17:20,0,12	0/0:9,0:7:0.47:0,0,1	0/0:16,0:13:11.55:0,12,72	0/1:28,3:27:71.98:72,0,455	0/1:22,1:22:42.91:43,0,422	0/1:16,0:7:0.93:56,0,1	./.	0/0:126,6:108:46:0,46,542	0/0:13,1:13:2.99:0,3,24	0/0:14,1:14:11.35:0,11,542	0/0:52,1:53:99:0,122,2268	1/1:8,4:9:3.01:49,3,0	0/1:19,1:17:83.99:84,0,182	0/0:11,0:9:8.55:0,9,94	0/1:4,0:4:11.13:28,0,11
chr10	65378765	.	C	CGT	6284.05	PASS	AB=1.000;AC=37;AF=0.661;AN=56;BaseQRankSum=0.914;DP=940;FS=1.494;HRun=0;HaplotypeScore=152.2726;InbreedingCoeff=0.7739;MQ=37.06;MQ0=77;MQRankSum=1.647;QD=9.87;ReadPosRankSum=2.310;VQSLOD=4.7511;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:21,17:35:20.98:338,21,0	1/1:8,4:11:14.22:249,14,0	0/0:61,0:5:1.80:0,2,76	0/0:61,0:11:21.01:0,21,235	0/0:16,0:15:15.05:0,15,188	1/1:8,4:11:0.93:93,1,0	1/1:43,15:46:31.10:528,31,0	0/1:19,0:13:2.58:3,0,138	0/0:25,0:23:45.04:0,45,529	0/0:43,0:28:46.92:0,47,444	0/0:13,0:11:14.44:0,14,124	1/1:23,12:29:26.95:397,27,0	0/0:20,0:20:38.66:0,39,406	1/1:25,7:19:14.96:220,15,0	1/1:8,3:9:9.03:130,9,0	1/1:6,4:9:8.03:77,8,0	1/1:25,12:32:38.46:622,38,0	1/1:21,8:26:17.63:452,18,0	1/1:10,1:3:3.01:32,3,0	1/1:14,1:11:2.47:9,2,0	1/1:156,64:191:99:1831,117,0	1/1:13,7:16:9.03:147,9,0	0/0:18,0:18:30.07:0,30,352	0/0:45,0:44:90.24:0,90,1103	1/1:12,7:17:15:236,15,0	1/1:30,10:27:43.09:657,43,0	1/1:11,3:11:13.86:203,14,0	1/1:5,0:4:5.89:57,6,0
chr10	65378772	.	GTGT	G	50.45	PASS	AB=0.990;AC=9;AF=0.161;AN=56;BaseQRankSum=5.016;DP=957;FS=1.421;HRun=0;HaplotypeScore=170.1579;InbreedingCoeff=-0.0710;MQ=36.84;MQ0=70;MQRankSum=-3.171;QD=0.27;ReadPosRankSum=-5.457;VQSLOD=0.8450;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:33:6.54:0,7,283	0/0:12,0:11:13.43:0,13,209	0/0:69,0:7:11.87:0,12,266	0/0:75,0:12:26.99:0,27,590	0/0:16,0:15:33.03:0,33,559	0/0:15,0:13:3.11:0,3,96	0/0:56,0:44:8.74:0,9,447	0/0:19,0:12:30.10:0,30,449	0/0:31,0:28:61.04:0,61,1234	0/1:39,1:29:1.21:1,0,1084	0/0:14,0:12:20.89:0,21,418	0/0:33,0:26:8.04:0,8,316	0/0:19,0:18:42.10:0,42,934	0/0:33,0:20:5.86:0,6,154	0/1:10,0:8:6.72:7,0,48	0/1:12,0:11:47.89:48,0,51	0/0:33,0:29:27.87:0,28,640	0/1:27,0:24:24.91:25,0,372	1/1:11,0:2:1.55:4,2,0	0/0:16,0:12:2.87:0,3,16	0/0:201,8:177:22.50:0,23,1658	0/1:23,0:17:7.90:8,0,115	0/0:21,0:21:45.12:0,45,898	0/0:46,0:45:99:0,114,2408	0/1:21,0:20:18.42:18,0,149	0/1:38,2:27:58.11:58,0,598	0/0:14,0:10:17.37:0,17,202	0/0:5,0:3:3.48:0,3,39
chr10	65378776	.	G	GC	697.87	PASS	AB=0.851;AC=15;AF=0.268;AN=56;BaseQRankSum=3.571;DP=942;FS=0.000;HRun=0;HaplotypeScore=159.5189;InbreedingCoeff=-0.1285;MQ=37.65;MQ0=60;MQRankSum=-2.466;QD=1.62;ReadPosRankSum=-7.384;VQSLOD=0.0549;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,1:32:9.27:0,9,97	0/0:9,2:12:12.96:0,13,83	0/0:67,0:7:12.02:0,12,138	0/0:77,0:13:30.08:0,30,358	0/1:23,0:22:1.55:2,0,225	0/1:11,4:13:30.39:81,0,30	0/0:47,4:42:8.78:0,9,178	0/0:18,2:13:33.07:0,33,419	0/0:33,0:31:59.86:0,60,799	0/0:35,0:27:5:0,5,555	0/0:14,0:12:15.03:0,15,194	0/1:28,3:27:29.60:30,0,94	0/0:22,0:21:48.11:0,48,618	0/0:26,2:20:8.77:0,9,64	0/1:7,1:8:8.25:8,0,28	0/1:9,4:12:13.36:99,0,13	0/0:21,2:24:7.49:0,7,164	0/1:20,2:21:77.42:109,0,77	1/1:9,0:2:2.04:6,2,0	1/1:7,4:12:2.86:33,3,0	0/1:163,18:166:99:187,0,527	0/1:17,3:16:35.99:36,0,40	0/0:19,0:19:42.14:0,42,585	0/0:50,0:50:99:0,111,1548	0/1:18,2:20:18.38:18,0,54	0/1:36,4:28:99:207,0,172	0/1:7,4:7:28.46:28,0,50	0/0:7,0:3:2.90:0,3,18
chr10	65378788	.	C	CGT	432.92	PASS	AB=1.000;AC=6;AF=0.107;AN=56;BaseQRankSum=0.872;DP=863;FS=1.974;HRun=0;HaplotypeScore=152.4860;InbreedingCoeff=0.4077;MQ=36.81;MQ0=56;MQRankSum=-2.713;QD=5.09;ReadPosRankSum=0.447;VQSLOD=3.3633;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:31:20.90:0,21,217	0/0:11,0:10:7.36:0,7,89	0/0:56,0:5:6:0,6,60	0/0:60,0:10:24:0,24,242	0/1:21,0:20:28.71:29,0,264	0/0:12,0:11:11.93:0,12,145	0/0:51,1:42:30.47:0,30,372	0/0:19,0:11:17.87:0,18,200	0/0:34,0:30:51.08:0,51,624	1/1:24,9:25:10.14:368,10,0	1/1:3,8:9:9.03:150,9,0	0/0:30,0:25:26.57:0,27,244	0/0:21,0:20:35.91:0,36,484	0/1:20,0:15:7.09:7,0,36	0/0:9,0:8:2.88:0,3,38	0/0:15,0:14:17.99:0,18,202	0/0:24,0:23:31.43:0,31,315	0/0:23,0:22:26.18:0,26,268	0/0:18,0:4:5.93:0,6,51	0/0:13,0:11:6:0,6,58	0/0:184,1:163:99:0,123,1483	0/0:17,0:15:9.03:0,9,114	0/0:15,0:14:27.09:0,27,343	0/0:46,1:45:99:0,101,1188	0/0:17,0:17:11.90:0,12,128	0/0:35,0:21:47.68:0,48,482	0/0:11,0:7:14.97:0,15,156	0/0:7,0:3:2.51:0,3,33
chr10	65378884	.	CAT	C	215.78	PASS	AB=0.820;AC=12;AF=0.222;AN=54;BaseQRankSum=5.251;DP=641;FS=1.985;HRun=0;HaplotypeScore=105.2506;InbreedingCoeff=-0.1294;MQ=38.48;MQ0=34;MQRankSum=-1.448;QD=1.33;ReadPosRankSum=-1.606;VQSLOD=1.6927;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:19,4:20:71.31:71,0,107	0/0:3,3:5:2.67:0,3,11	0/1:17,0:2:3.06:3,0,34	0/0:27,0:3:8.78:0,9,60	0/0:20,0:19:38.90:0,39,652	1/1:7,3:8:0.62:2,1,0	0/0:33,6:32:21.72:0,22,467	0/0:14,0:10:30.01:0,30,467	0/0:25,0:25:63.20:0,63,1156	0/0:31,0:20:36.26:0,36,418	./.	0/0:25,4:25:0.34:0,0,78	0/0:20,0:19:48.08:0,48,800	0/1:16,8:17:11.39:11,0,156	0/1:10,3:9:7.10:7,0,43	0/0:9,4:10:5.80:0,6,37	0/1:17,4:18:92.37:92,0,272	0/1:12,2:13:42.17:42,0,212	0/0:11,0:5:14.88:0,15,152	0/1:5,4:9:6.90:7,0,33	0/0:108,13:102:30.74:0,31,768	0/0:10,3:9:5.85:0,6,73	0/0:7,0:6:18.01:0,18,302	0/0:72,0:70:99:0,186,3411	0/1:14,0:13:6.16:6,0,8	0/0:20,3:17:29.77:0,30,386	0/1:7,3:7:6.97:72,0,7	0/1:3,3:5:31.15:31,0,60
chr10	65378885	.	ATG	A	47.28	PASS	AB=0.978;AC=13;AF=0.250;AN=52;BaseQRankSum=6.167;DP=651;FS=2.120;HRun=0;HaplotypeScore=107.0767;InbreedingCoeff=0.1584;MQ=38.64;MQ0=35;MQRankSum=-2.654;QD=0.32;ReadPosRankSum=-1.568;VQSLOD=1.3215;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:20:22.49:22,0,73	./.	0/0:17,0:2:3.48:0,3,44	0/0:28,0:3:2.96:0,3,19	0/0:21,0:20:39.10:0,39,588	0/1:9,1:9:0.17:0,0,0	0/0:41,1:34:12.75:0,13,236	0/0:14,0:10:21.06:0,21,283	0/0:25,0:25:63.18:0,63,958	0/0:31,0:20:3.83:0,4,239	./.	0/0:31,0:27:6.30:0,6,49	0/0:20,0:19:39.10:0,39,595	0/1:25,0:18:5.01:5,0,80	0/0:12,1:9:3.32:0,3,25	1/1:13,0:10:0.30:1,0,0	0/1:22,0:19:43.47:43,0,117	0/1:14,0:13:20.87:21,0,67	0/0:11,0:5:6:0,6,52	1/1:9,0:9:2.69:8,3,0	0/0:119,2:103:16.76:0,17,325	0/0:13,0:9:3.01:0,3,40	0/0:9,0:8:15.04:0,15,232	0/0:71,0:69:99:0,171,2753	0/1:14,0:13:0.01:0,0,0	0/0:23,0:17:18.03:0,18,214	1/1:10,0:6:7.68:50,8,0	0/1:6,0:5:19.24:19,0,26
chr10	65378894	.	TGC	T	1924.35	PASS	AB=0.984;AC=31;AF=0.574;AN=54;BaseQRankSum=3.950;DP=695;FS=0.000;HRun=0;HaplotypeScore=105.7340;InbreedingCoeff=0.2080;MQ=39.01;MQ0=30;MQRankSum=-4.292;QD=3.83;ReadPosRankSum=-7.936;VQSLOD=-0.1417;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:24:12.31:147,0,12	0/1:6,0:5:0:0,0,0	0/1:22,0:6:5.96:6,0,72	0/0:30,1:5:5.11:0,5,27	0/0:23,0:22:7.95:0,8,454	1/1:12,0:10:3.88:27,4,0	0/1:40,0:33:30.57:123,0,31	0/1:12,0:8:0.36:0,0,128	0/0:29,0:29:63.75:0,64,952	0/1:28,2:20:83.92:98,0,84	./.	1/1:33,0:30:24.46:175,24,0	0/0:21,0:20:42.06:0,42,626	0/1:25,0:18:6.87:66,0,7	1/1:14,0:9:2.99:24,3,0	1/1:15,0:12:11.90:85,12,0	1/1:22,1:21:7.97:223,8,0	1/1:16,0:16:34.67:284,35,0	1/1:12,0:7:13.96:92,14,0	1/1:10,0:10:5.99:50,6,0	0/1:125,6:113:25.73:293,0,26	0/1:15,0:11:7.20:40,0,7	0/0:11,0:10:19.87:0,20,262	0/0:69,0:69:99:0,176,2775	1/1:14,0:13:5.99:49,6,0	0/1:27,0:21:91.86:92,0,101	1/1:11,0:8:14.91:147,15,0	0/1:5,0:5:1.74:72,0,2
chr10	65379005	.	GGT	G	6487.73	PASS	AB=0.711;AC=35;AF=0.648;AN=54;BaseQRankSum=2.387;DP=785;FS=37.520;HRun=0;HaplotypeScore=135.2658;InbreedingCoeff=0.6839;MQ=43.77;MQ0=56;MQRankSum=0.697;QD=14.23;ReadPosRankSum=6.280;VQSLOD=2.9879;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,24:36:14.92:195,15,0	0/1:4,1:5:14.32:29,0,14	0/0:76,0:14:27.06:0,27,398	0/0:85,0:20:48.16:0,48,751	0/0:15,0:14:21.07:0,21,347	1/1:3,11:15:21.07:273,21,0	1/1:11,22:35:44.72:585,45,0	1/1:5,10:13:18.06:226,18,0	0/0:32,0:32:64.77:0,65,1064	0/0:31,0:25:29.29:0,29,479	./.	1/1:5,16:25:0.99:272,1,0	0/0:13,0:13:30.04:0,30,421	1/1:5,14:21:20.76:268,21,0	1/1:0,2:3:6.02:78,6,0	1/1:5,6:12:7.17:149,7,0	0/1:7,14:22:51.61:387,0,52	1/1:6,17:24:27.98:608,28,0	1/1:9,7:11:20.08:224,20,0	1/1:2,9:11:24.08:312,24,0	1/1:42,65:118:99:1470,116,0	1/1:4,11:15:21.07:273,21,0	0/0:9,0:9:24.08:0,24,396	0/0:61,0:59:99:0,135,2188	1/1:0,10:12:15.05:195,15,0	1/1:10,16:25:5.78:611,6,0	0/1:3,5:9:4.95:213,0,5	1/1:0,6:6:9.03:117,9,0
chr10	65379045	.	C	CGT	1286.99	PASS	AB=0.867;AC=23;AF=0.523;AN=44;BaseQRankSum=7.137;DP=510;FS=29.674;HRun=0;HaplotypeScore=108.8696;InbreedingCoeff=0.4010;MQ=40.82;MQ0=27;MQRankSum=-1.064;QD=5.17;ReadPosRankSum=-0.516;VQSLOD=1.0498;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:17,7:23:31.51:39,0,32	1/1:1,1:2:3.01:49,3,0	./.	0/0:43,0:8:14.94:0,15,159	0/0:17,0:16:18.05:0,18,224	1/1:10,2:11:12.04:179,12,0	0/1:22,1:20:28.53:60,0,29	0/0:24,0:18:36.03:0,36,398	0/0:28,0:28:63.10:0,63,739	0/0:20,0:14:30.50:0,31,272	./.	1/1:16,6:20:9.12:79,9,0	0/0:18,0:19:43.02:0,43,502	1/1:10,3:13:8.60:83,9,0	./.	1/1:8,2:7:6.91:96,7,0	0/1:13,5:15:64.70:173,0,65	0/1:18,2:20:36.17:119,0,36	1/1:5,1:3:3.01:49,3,0	./.	0/1:48,5:42:56.62:120,0,57	1/1:10,1:9:5.99:48,6,0	0/0:14,0:14:31.41:0,31,345	0/0:53,0:52:99:0,116,1359	./.	1/1:20,1:18:18.95:275,19,0	1/1:4,2:6:6.02:84,6,0	./.
chr10	65379557	.	C	CA	463.96	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=4.499;DP=326;FS=5.969;HRun=8;HaplotypeScore=60.5505;InbreedingCoeff=0.4034;MQ=51.67;MQ0=5;MQRankSum=-2.842;QD=3.90;ReadPosRankSum=-1.391;VQSLOD=-0.5821;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:7:2.83:0,3,6	0/0:2,0:2:0.47:0,0,1	0/0:13,0:3:9:0,9,82	0/0:10,0:3:8.99:0,9,76	0/0:13,0:13:33.02:0,33,302	0/0:15,0:15:5.65:0,6,11	0/0:6,0:6:1.08:0,1,2	0/1:27,0:24:12.25:15,0,12	0/0:3,0:3:5.98:0,6,50	1/1:11,2:14:29.80:254,30,0	1/1:9,7:16:30.75:295,31,0	0/0:5,0:5:0.93:0,1,2	0/0:8,0:8:5.98:0,6,50	0/0:6,0:6:3.11:0,3,21	0/0:8,0:8:1.88:0,2,4	0/0:11,0:11:3.20:0,3,7	0/0:24,0:24:8.35:0,8,17	0/1:33,0:33:3.92:4,0,19	0/0:6,0:6:0.55:0,1,1	0/0:11,0:11:1.18:0,1,2	1/1:5,0:5:0.05:0,0,0	1/1:9,0:8:0.94:2,1,0	0/0:7,0:7:15.01:0,15,137	0/0:9,0:9:18.01:0,18,165	0/0:17,0:17:6.16:0,6,20	0/1:14,0:14:0.11:19,0,0	0/0:12,0:12:3.78:0,4,8	0/0:14,0:14:7:0,7,23
chr10	65379564	.	AAT	A	2034.66	PASS	AB=0.881;AC=39;AF=0.696;AN=56;BaseQRankSum=3.874;DP=289;FS=8.618;HRun=0;HaplotypeScore=55.1971;InbreedingCoeff=0.6189;MQ=51.94;MQ0=3;MQRankSum=3.032;QD=8.70;ReadPosRankSum=4.829;VQSLOD=1.6513;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,0:8:15.58:59,16,0	1/1:2,0:2:2.60:10,3,0	0/0:15,0:3:9.03:0,9,132	0/0:10,0:3:9.01:0,9,108	0/0:13,0:13:36.10:0,36,501	1/1:12,0:12:31.16:118,31,0	1/1:4,0:4:10.28:39,10,0	0/1:13,16:27:99:368,0,248	0/0:2,0:2:6.02:0,6,104	1/1:14,0:14:28.56:225,29,0	0/1:13,0:13:3.85:54,0,4	1/1:5,0:5:5.19:20,5,0	0/0:2,0:2:6:0,6,76	0/1:4,0:4:8.68:36,0,9	1/1:4,0:4:10.39:39,10,0	1/1:9,1:10:21.18:113,21,0	1/1:23,1:24:46.85:209,47,0	1/1:33,0:33:48.24:252,48,0	1/1:5,0:5:12.02:55,12,0	1/1:5,0:5:13.72:69,14,0	1/1:5,0:5:10.86:40,11,0	1/1:5,0:5:4.67:24,5,0	0/0:5,0:5:15.04:0,15,200	0/0:8,0:8:20.96:0,21,316	1/1:14,0:14:20.76:139,21,0	1/1:14,0:14:35.60:187,36,0	1/1:12,0:12:25.49:95,25,0	1/1:12,0:12:9.09:71,9,0
chr10	65379565	.	AT	A	6347.19	PASS	AB=1.000;AC=41;AF=0.732;AN=56;BaseQRankSum=2.080;DP=283;FS=3.116;HRun=1;HaplotypeScore=35.3875;InbreedingCoeff=0.7455;MQ=52.06;MQ0=3;MQRankSum=0.038;QD=27.84;ReadPosRankSum=4.707;VQSLOD=4.6452;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,8:8:18.06:251,18,0	1/1:0,2:2:3.01:42,3,0	0/0:15,0:3:9.03:0,9,118	0/0:10,0:3:9.01:0,9,101	0/0:13,0:13:36.10:0,36,453	1/1:0,12:12:36.12:502,36,0	1/1:0,4:4:12.04:167,12,0	0/1:28,0:26:99:123,0,234	0/0:2,0:2:6.02:0,6,82	1/1:6,7:13:38.12:264,38,0	1/1:8,4:12:31.19:158,31,0	1/1:0,4:4:6.02:84,6,0	0/0:2,0:2:6.01:0,6,65	1/1:2,2:4:2.36:102,2,0	1/1:0,4:4:12.04:167,12,0	1/1:1,9:10:24.03:312,24,0	1/1:1,23:24:54.13:727,54,0	1/1:1,31:32:69.98:969,70,0	1/1:0,5:5:15.02:174,15,0	1/1:0,5:5:14.96:165,15,0	1/1:1,4:5:15.04:193,15,0	1/1:0,5:5:11.91:139,12,0	0/0:5,0:5:15.03:0,15,177	0/0:8,0:8:20.96:0,21,265	1/1:2,12:14:37.50:505,38,0	1/1:0,14:14:42.03:492,42,0	1/1:0,12:12:30.10:415,30,0	1/1:2,9:11:27.87:399,28,0
chr10	65379568	.	AAT	A	136.29	PASS	AB=0.754;AC=2;AF=0.036;AN=56;BaseQRankSum=6.876;DP=289;FS=1.997;HRun=0;HaplotypeScore=62.1619;InbreedingCoeff=0.1099;MQ=51.84;MQ0=3;MQRankSum=-6.473;QD=5.45;ReadPosRankSum=0.617;VQSLOD=2.7060;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:21.05:0,21,230	0/0:2,0:2:3.01:0,3,32	0/0:16,0:3:8.39:0,8,104	0/0:10,0:2:6.02:0,6,96	0/0:13,0:13:33.08:0,33,529	0/0:14,0:14:42.11:0,42,463	0/0:4,0:4:12.02:0,12,121	0/0:29,0:27:13.08:0,13,247	0/0:3,0:3:9.01:0,9,138	0/1:6,7:13:2.24:184,0,2	0/1:10,2:12:40.30:40,0,90	0/0:4,0:4:5.90:0,6,64	0/0:1,0:1:3.01:0,3,56	0/0:4,0:4:10.81:0,11,86	0/0:4,0:4:12.03:0,12,130	0/0:10,0:10:24.34:0,24,207	0/0:24,0:24:45.41:0,45,464	0/0:31,0:31:36.85:0,37,706	0/0:6,0:6:17.05:0,17,175	0/0:5,0:5:11.95:0,12,112	0/0:5,0:5:11.93:0,12,124	0/0:5,0:5:12.01:0,12,117	0/0:4,0:4:12.04:0,12,194	0/0:7,0:7:21.05:0,21,364	0/0:14,0:14:38.92:0,39,413	0/0:15,1:16:16.34:0,16,325	0/0:12,0:12:28.86:0,29,281	0/0:12,0:12:35.98:0,36,396
chr10	65379570	.	T	TA	428.31	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-5.883;DP=286;FS=5.579;HRun=3;HaplotypeScore=58.4355;InbreedingCoeff=0.4127;MQ=51.87;MQ0=3;MQRankSum=-1.400;QD=13.82;ReadPosRankSum=-4.214;VQSLOD=1.1492;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:24.01:0,24,257	0/0:2,0:2:3.01:0,3,36	0/0:14,0:3:5.98:0,6,56	0/0:11,0:3:4.56:0,5,39	0/0:10,0:10:21.06:0,21,252	0/0:14,0:14:42.08:0,42,484	0/0:4,0:4:11.88:0,12,93	1/1:18,13:29:20.95:520,21,0	0/0:3,0:3:9.03:0,9,107	0/0:12,0:12:19.41:0,19,69	0/0:12,0:12:7.72:0,8,35	0/0:3,0:3:5.84:0,6,37	0/0:1,0:1:3.01:0,3,36	0/0:4,0:4:6.02:0,6,72	0/0:4,0:4:11.93:0,12,109	0/0:9,0:9:20.90:0,21,199	0/0:24,0:24:49.07:0,49,469	0/0:30,0:30:68.48:0,68,700	0/0:7,0:7:10.79:0,11,123	0/0:5,0:5:11.88:0,12,92	0/0:4,0:4:11.88:0,12,92	0/0:5,0:5:11.85:0,12,89	0/0:5,0:5:9.01:0,9,96	0/0:7,0:7:18.05:0,18,215	0/0:14,0:14:38.69:0,39,331	0/0:16,0:16:20.39:0,20,333	0/0:12,0:12:26.98:0,27,288	0/0:12,0:12:35.95:0,36,376
chr10	65379574	.	TA	T	253.79	PASS	AB=0.868;AC=5;AF=0.089;AN=56;BaseQRankSum=6.272;DP=279;FS=0.985;HRun=4;HaplotypeScore=55.6020;InbreedingCoeff=0.1641;MQ=51.98;MQ0=2;MQRankSum=-5.223;QD=4.88;ReadPosRankSum=0.833;VQSLOD=-0.1287;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:27.09:0,27,365	0/0:2,0:2:3.01:0,3,42	0/0:13,0:3:3.01:0,3,42	0/1:12,1:4:8.08:8,0,30	0/0:7,0:7:18.06:0,18,251	0/0:14,0:14:42.14:0,42,577	0/0:4,0:4:8.89:0,9,90	0/0:31,0:29:74.24:0,74,855	0/0:3,0:3:9.03:0,9,125	1/1:3,9:12:12:283,12,0	0/1:8,3:11:33.57:53,0,34	0/0:3,0:3:5.83:0,6,67	0/0:2,0:2:6:0,6,65	0/0:2,0:2:6.02:0,6,84	0/0:6,0:6:18.02:0,18,212	0/0:8,0:8:24.08:0,24,315	0/0:24,0:24:51.07:0,51,645	0/0:31,0:31:61.36:0,61,884	0/0:8,0:8:21.06:0,21,267	0/0:4,0:4:12.03:0,12,140	0/0:5,0:5:12.03:0,12,148	0/0:2,0:2:2.96:0,3,20	0/0:3,0:3:6.02:0,6,83	0/0:6,0:6:15.05:0,15,210	0/0:15,0:15:42.09:0,42,526	0/1:14,2:16:23.71:24,0,384	0/0:11,0:11:24.08:0,24,327	0/0:12,0:12:36.11:0,36,477
chr10	65379886	.	G	GGT	1190.38	PASS	AB=0.972;AC=37;AF=0.881;AN=42;BaseQRankSum=-1.034;DP=529;FS=0.000;HRun=0;HaplotypeScore=87.5512;InbreedingCoeff=0.0644;MQ=67.60;MQ0=8;MQRankSum=-1.093;QD=2.83;ReadPosRankSum=-1.270;VQSLOD=1.5895;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:35,0:35:14.78:175,15,0	1/1:8,0:8:6.02:83,6,0	./.	./.	1/1:13,0:13:2.99:24,3,0	./.	1/1:23,0:23:2.97:23,3,0	./.	0/1:19,0:20:0:0,0,0	0/1:15,0:14:0:0,0,0	./.	1/1:17,0:17:2.98:22,3,0	1/1:19,0:18:8.78:88,9,0	1/1:18,0:18:8.96:69,9,0	1/1:19,0:18:3:25,3,0	0/1:15,0:16:8.09:19,0,8	0/1:21,3:25:25.54:38,0,26	1/1:13,0:12:6:62,6,0	./.	./.	1/1:40,7:48:9.49:113,9,0	1/1:12,0:12:3.01:44,3,0	1/1:16,0:16:8.75:89,9,0	1/1:34,0:34:18.03:209,18,0	1/1:8,3:11:3.01:44,3,0	1/1:23,0:22:6.91:86,7,0	1/1:21,0:21:6.01:66,6,0	0/1:13,0:12:0:0,0,0
chr10	65380947	.	CGA	C	8209.41	PASS	AB=0.850;AC=25;AF=0.446;AN=56;BaseQRankSum=-5.449;DP=674;FS=14.048;HRun=0;HaplotypeScore=113.1874;InbreedingCoeff=0.0995;MQ=66.72;MQ0=8;MQRankSum=3.133;QD=18.12;ReadPosRankSum=3.987;VQSLOD=4.5244;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:45,0:45:55.24:1027,55,0	0/1:11,0:11:6.87:192,0,7	0/0:29,0:23:62.88:0,63,930	0/0:35,0:20:57.59:0,58,859	0/0:18,0:18:39.59:0,40,620	0/1:12,10:21:19.56:29,0,20	1/1:29,0:28:39.65:748,40,0	1/1:5,22:27:60.16:827,60,0	0/0:13,0:13:21.07:0,21,337	0/1:13,22:35:99:633,0,157	0/1:19,0:19:41.84:42,0,134	1/1:22,0:26:15.72:434,16,0	0/0:16,0:16:47.02:0,47,584	0/0:13,18:30:11.01:0,11,77	1/1:24,1:25:28.70:645,29,0	0/1:21,0:21:4.41:513,0,4	0/1:15,0:15:45:153,0,45	0/1:12,0:10:71.51:228,0,72	0/1:5,14:19:33.68:465,0,34	1/1:8,12:19:8.89:94,9,0	0/0:12,26:38:10.03:0,10,72	0/1:10,16:26:26.37:26,0,58	0/0:8,0:8:16.07:0,16,345	0/0:33,0:33:69.02:0,69,1099	0/1:14,0:13:19.80:315,0,20	0/1:16,20:34:99:684,0,190	0/1:18,2:19:2.82:461,0,3	0/1:29,0:27:86.09:693,0,86
chr10	65380949	.	A	AGC	4285.31	PASS	AB=1.000;AC=36;AF=0.643;AN=56;BaseQRankSum=3.849;DP=644;FS=1.314;HRun=0;HaplotypeScore=153.1997;InbreedingCoeff=0.6109;MQ=68.01;MQ0=7;MQRankSum=0.287;QD=9.32;ReadPosRankSum=1.364;VQSLOD=4.4676;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:42,0:42:61.97:521,62,0	1/1:9,0:9:0.22:98,0,0	0/0:29,0:23:62.34:0,62,826	0/0:35,0:20:57.09:0,57,758	0/0:16,0:16:39.11:0,39,555	0/1:21,0:20:11.57:29,0,12	1/1:28,0:27:42.95:335,43,0	1/1:22,0:22:58.62:428,59,0	0/0:13,0:13:20.90:0,21,272	1/1:33,0:33:75.89:541,76,0	1/1:5,12:17:8.70:80,9,0	1/1:26,0:25:20.11:183,20,0	0/0:16,0:16:45.12:0,45,624	1/1:31,0:30:0.78:14,1,0	1/1:23,0:24:35.97:306,36,0	0/1:21,0:21:3.36:189,0,3	0/1:14,0:14:2.09:116,0,2	1/1:12,0:10:3.53:129,4,0	1/1:19,0:19:6.59:184,7,0	1/1:19,0:19:10.86:64,11,0	0/0:36,0:36:7.21:0,7,39	0/1:24,0:24:10.57:11,0,15	0/0:8,0:8:24.08:0,24,352	0/0:31,0:31:69.13:0,69,917	1/1:14,0:13:6.68:136,7,0	1/1:33,0:31:39.01:341,39,0	1/1:21,0:21:40.54:275,41,0	1/1:28,0:26:38.60:307,39,0
chr10	65381061	.	CTCAT	C	1141.99	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=7.894;DP=662;FS=3.424;HRun=0;HaplotypeScore=105.8007;InbreedingCoeff=0.7753;MQ=66.26;MQ0=0;MQRankSum=0.523;QD=19.03;ReadPosRankSum=-0.564;VQSLOD=2.9512;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,99,2343	0/0:12,0:12:24.07:0,24,526	0/1:24,0:20:14.33:14,0,794	0/0:20,0:19:39.55:0,40,639	0/0:20,0:20:57.18:0,57,1264	0/0:22,0:22:48.15:0,48,1089	0/0:26,0:26:60.07:0,60,1307	0/0:33,0:33:63.17:0,63,1160	0/0:23,0:23:63.16:0,63,1272	1/1:5,16:21:47.67:699,48,0	1/1:2,13:15:35.74:557,36,0	0/0:27,0:27:66.21:0,66,1423	0/0:17,0:17:36.11:0,36,796	0/0:26,0:26:63.18:0,63,1414	0/0:17,0:17:45.12:0,45,907	0/0:20,0:20:54.12:0,54,1156	0/0:22,0:22:48.12:0,48,1061	0/0:31,0:31:75.18:0,75,1631	0/0:27,0:27:54.15:0,54,1013	0/0:23,0:23:50.88:0,51,1009	0/0:55,0:55:99:0,132,3094	0/0:23,0:23:60.19:0,60,1418	0/0:15,0:15:39.12:0,39,877	0/0:29,0:29:81.20:0,81,1667	0/0:22,0:22:66.19:0,66,1394	0/0:28,0:28:72.24:0,72,1633	0/0:16,0:16:42.14:0,42,969	0/0:7,0:7:12.04:0,12,245
chr10	65382092	.	T	TA	5635.49	PASS	AB=0.889;AC=39;AF=0.696;AN=56;BaseQRankSum=3.291;DP=387;FS=11.065;HRun=9;HaplotypeScore=79.3590;InbreedingCoeff=0.8173;MQ=53.23;MQ0=0;MQRankSum=-5.970;QD=19.70;ReadPosRankSum=-1.389;VQSLOD=4.1068;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:10,18:28:53.94:532,54,0	1/1:0,2:2:5.93:50,6,0	0/0:18,0:11:16.40:0,16,118	0/0:4,0:2:6:0,6,51	0/0:22,0:22:50.95:0,51,439	1/1:8,10:18:42.11:457,42,0	1/1:2,13:13:33.09:365,33,0	0/0:21,0:19:29.96:0,30,260	0/0:6,0:6:11.98:0,12,104	1/1:6,0:6:6.71:46,7,0	1/1:8,0:8:5.02:51,5,0	1/1:6,4:11:26.86:248,27,0	0/0:9,0:9:17.95:0,18,153	1/1:6,3:9:20.94:194,21,0	1/1:6,8:14:26.21:250,26,0	1/1:6,9:15:30.07:325,30,0	1/1:13,18:31:57.10:599,57,0	1/1:12,12:24:18.77:391,19,0	1/1:9,10:19:35.86:390,36,0	1/1:11,12:23:50.98:513,51,0	1/1:2,4:5:8.98:86,9,0	1/1:1,2:3:6.02:66,6,0	0/0:9,0:9:20.98:0,21,182	0/0:12,0:12:26.99:0,27,234	1/1:7,8:15:27.03:279,27,0	1/1:4,5:9:21.06:231,21,0	1/1:10,12:22:44.75:475,45,0	0/1:7,1:8:11.04:89,0,11
chr10	65382109	.	AC	A	1403.63	PASS	AB=0.973;AC=28;AF=0.500;AN=56;BaseQRankSum=9.095;DP=372;FS=4.818;HRun=1;HaplotypeScore=86.8977;InbreedingCoeff=0.0049;MQ=55.90;MQ0=2;MQRankSum=-5.940;QD=4.84;ReadPosRankSum=4.475;VQSLOD=0.7956;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:21,0:21:46.02:46,0,75	1/1:2,0:2:5.14:24,5,0	0/1:19,1:12:33.47:33,0,70	0/1:4,1:3:5.58:6,0,15	0/0:23,0:23:15.44:0,15,531	0/1:17,0:17:28.06:28,0,73	0/1:17,0:15:6.76:7,0,91	0/0:17,0:16:25.83:0,26,296	0/0:9,0:9:8.88:0,9,223	1/1:11,0:11:28.48:219,28,0	1/1:21,0:21:54.15:378,54,0	0/1:10,0:10:9.18:67,0,9	0/0:9,0:9:23.75:0,24,249	1/1:8,1:8:20.54:126,21,0	1/1:10,2:12:9.58:107,10,0	0/1:13,1:14:40.50:70,0,41	0/1:24,0:23:26.58:80,0,27	0/1:20,0:20:38.61:39,0,106	0/1:17,1:18:61.47:61,0,140	0/1:19,1:20:43.55:44,0,45	0/1:4,0:3:1.82:4,0,2	1/1:3,0:3:5.10:22,5,0	0/0:7,0:7:20.90:0,21,220	0/0:8,0:8:20.78:0,21,181	0/1:13,0:13:16.62:26,0,17	0/0:9,0:9:6.69:0,7,63	0/1:23,0:23:25.59:113,0,26	1/1:5,1:6:11.09:83,11,0
chr10	65382110	.	CA	C	3726.82	PASS	AB=0.794;AC=36;AF=0.643;AN=56;BaseQRankSum=3.795;DP=373;FS=9.696;HRun=11;HaplotypeScore=80.4384;InbreedingCoeff=0.7434;MQ=54.39;MQ0=3;MQRankSum=-5.688;QD=14.45;ReadPosRankSum=3.755;VQSLOD=3.5093;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,17:21:44.92:369,45,0	1/1:1,1:2:5.99:49,6,0	0/0:19,0:11:9.94:0,10,88	0/0:6,0:3:8.95:0,9,76	0/0:21,2:23:0.86:0,1,424	1/1:5,12:17:35.94:294,36,0	1/1:1,14:14:23.92:197,24,0	0/1:13,1:15:0.74:1,0,166	0/0:9,1:10:5.54:0,6,255	0/0:11,0:11:11.21:0,11,78	0/0:21,0:21:14.27:0,14,99	1/1:4,6:10:23.89:190,24,0	0/0:9,0:9:24.05:0,24,248	1/1:4,5:8:23.01:177,23,0	1/1:5,7:12:29.73:229,30,0	1/1:6,8:14:14.36:220,14,0	1/1:6,16:23:52:405,52,0	1/1:9,11:20:20.94:225,21,0	1/1:11,6:17:26.92:223,27,0	0/1:10,10:22:12.63:217,0,13	1/1:1,3:3:5.02:30,5,0	1/1:0,3:3:5.99:49,6,0	0/0:5,0:7:20.72:0,21,188	0/0:9,0:9:11.99:0,12,115	1/1:1,12:13:29.96:246,30,0	1/1:5,4:9:14.96:121,15,0	1/1:7,16:23:31.70:365,32,0	1/1:3,3:6:14.95:118,15,0
chr10	65382121	.	AC	A	887.53	PASS	AB=1.000;AC=27;AF=0.482;AN=56;BaseQRankSum=5.654;DP=363;FS=0.000;HRun=1;HaplotypeScore=86.8492;InbreedingCoeff=0.3132;MQ=56.65;MQ0=5;MQRankSum=-5.509;QD=3.96;ReadPosRankSum=7.906;VQSLOD=-0.1863;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:20,0:20:11.55:121,0,12	1/1:1,1:2:5.74:38,6,0	0/0:20,0:12:26.26:0,26,174	0/0:9,0:5:4.97:0,5,88	0/0:21,0:20:49.96:0,50,642	1/1:12,1:13:26.72:127,27,0	1/1:16,0:14:4.80:40,5,0	0/0:21,0:20:29.80:0,30,369	0/0:10,0:10:24.29:0,24,335	0/0:14,0:14:38.81:0,39,322	0/0:22,0:22:51.97:0,52,395	1/1:7,1:8:18.20:87,18,0	0/0:9,0:9:26.45:0,26,323	0/1:11,0:11:33.94:34,0,36	1/1:11,0:11:6.66:91,7,0	1/1:11,0:11:11.79:83,12,0	0/1:23,0:23:33.31:87,0,33	1/1:15,0:15:3.49:45,3,0	0/1:12,0:12:22.54:23,0,29	0/1:21,0:21:15.76:16,0,153	0/1:6,0:5:5.25:5,0,41	0/1:7,0:6:9.18:9,0,57	0/0:7,0:7:21.03:0,21,249	0/0:6,0:6:17.80:0,18,182	0/1:13,0:13:1.06:54,0,1	1/1:4,1:5:9.03:46,9,0	0/1:23,0:23:18.13:117,0,18	1/1:7,0:7:12.26:54,12,0
chr10	65382187	.	A	AAAG	642.92	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=-2.068;DP=474;FS=0.676;HRun=0;HaplotypeScore=112.5707;InbreedingCoeff=0.3140;MQ=58.92;MQ0=10;MQRankSum=-0.074;QD=5.59;ReadPosRankSum=-2.107;VQSLOD=2.4273;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:17:34.38:0,34,331	0/0:13,0:13:23.27:0,23,178	0/0:30,0:11:27.47:0,27,228	0/1:44,0:15:31.48:31,0,42	0/0:18,0:17:49.64:0,50,646	0/0:18,0:17:32.56:0,33,276	0/0:8,0:8:14.92:0,15,131	1/1:6,20:31:27.56:699,28,0	0/0:8,0:8:23.94:0,24,268	0/0:18,0:17:8.62:0,9,128	0/1:20,0:20:1.05:1,0,120	0/0:12,0:10:12.75:0,13,92	0/0:10,0:10:26.96:0,27,315	0/0:9,0:8:17.74:0,18,153	0/0:12,0:12:8.82:0,9,137	0/0:8,0:8:11.65:0,12,130	0/0:39,0:38:51.61:0,52,533	0/0:17,0:16:41.36:0,41,350	0/0:17,0:17:19.80:0,20,279	0/0:19,0:18:33.90:0,34,254	0/0:7,0:7:8.54:0,9,69	0/0:11,0:10:20.14:0,20,121	0/0:5,0:5:14.87:0,15,161	0/0:21,0:21:54:0,54,644	0/0:9,0:9:17.94:0,18,161	0/0:21,0:18:31.95:0,32,249	0/1:19,0:18:26.69:27,0,133	0/0:11,0:10:8.92:0,9,65
chr10	65382209	.	GGAA	G	679.48	PASS	AB=0.929;AC=5;AF=0.089;AN=56;BaseQRankSum=2.901;DP=417;FS=4.639;HRun=0;HaplotypeScore=84.7948;InbreedingCoeff=0.7380;MQ=84.28;MQ0=2;MQRankSum=-5.408;QD=18.87;ReadPosRankSum=0.703;VQSLOD=2.8857;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:54.18:0,54,1136	0/0:6,0:6:7.16:0,7,319	0/0:30,0:23:57.14:0,57,1097	0/0:48,0:24:40.78:0,41,597	0/0:17,0:17:51.18:0,51,1130	0/0:11,0:10:27.09:0,27,599	0/0:8,0:8:21.06:0,21,423	0/0:22,0:22:60.21:0,60,1300	0/0:9,0:9:27.09:0,27,585	1/1:3,11:14:33.07:503,33,0	1/1:3,6:9:18.06:292,18,0	0/0:15,0:15:39.13:0,39,853	0/0:5,0:5:12.04:0,12,262	0/0:6,0:6:18.06:0,18,399	0/0:5,0:5:15.05:0,15,329	0/0:14,0:14:42.14:0,42,903	0/0:36,0:36:90.31:0,90,1936	0/0:15,0:15:42.14:0,42,894	0/0:17,0:17:45.15:0,45,975	0/0:15,0:15:42.13:0,42,867	0/0:8,0:8:21.07:0,21,437	0/0:7,0:7:18.06:0,18,399	0/0:9,0:9:27.09:0,27,580	0/0:22,0:22:66.23:0,66,1428	0/0:11,0:11:33.11:0,33,717	0/1:12,1:13:9.62:10,0,744	0/0:14,0:14:33.11:0,33,715	0/0:13,0:13:18.06:0,18,399
chr10	65383325	.	A	AG	11913.52	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-13.452;DP=605;FS=1.499;HRun=5;HaplotypeScore=68.4713;InbreedingCoeff=0.9846;MQ=82.57;MQ0=0;MQRankSum=-0.650;QD=30.47;ReadPosRankSum=4.376;VQSLOD=5.4374;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,30:35:84.27:1075,84,0	1/1:2,10:12:26.65:276,27,0	0/0:23,0:23:45.15:0,45,390	0/0:17,0:18:6.24:0,6,185	0/0:17,0:17:45.08:0,45,464	1/1:1,18:19:51.17:654,51,0	1/1:5,22:28:57.19:732,57,0	0/0:30,0:30:80.86:0,81,809	0/0:21,0:21:60.08:0,60,604	0/0:29,0:29:75.17:0,75,796	0/0:15,0:15:36.08:0,36,380	1/1:2,18:20:48.16:615,48,0	0/0:26,0:26:66.15:0,66,694	1/1:0,14:14:39.13:501,39,0	1/1:1,19:20:36.12:463,36,0	1/1:1,15:16:36.12:463,36,0	1/1:2,26:28:72.23:925,72,0	1/1:1,16:17:42.14:540,42,0	1/1:4,19:24:63.16:776,63,0	1/1:2,21:23:60.14:747,60,0	1/1:1,25:26:60.17:753,60,0	1/1:3,15:18:32.54:467,33,0	0/0:19,0:19:51.06:0,51,504	0/0:15,0:15:42.11:0,42,449	1/1:0,24:24:66.21:845,66,0	1/1:2,30:32:60.66:1005,61,0	1/1:1,20:21:54.17:691,54,0	1/1:0,14:14:30.10:385,30,0
chr10	65385840	.	TG	T	14784.07	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=19.043;DP=628;FS=7.150;HRun=1;HaplotypeScore=127.9418;InbreedingCoeff=0.9907;MQ=77.39;MQ0=0;MQRankSum=-1.240;QD=38.01;ReadPosRankSum=3.538;VQSLOD=4.0368;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,38:38:99:1467,105,0	1/1:0,9:9:21.07:293,21,0	0/0:24,0:23:69.22:0,69,1069	0/0:24,0:23:57.66:0,58,855	0/0:18,0:18:54.18:0,54,860	1/1:0,18:18:51.17:713,51,0	1/1:0,24:24:63.21:881,63,0	0/0:29,0:29:84.28:0,84,1322	0/0:26,0:26:78.27:0,78,1246	0/0:32,0:32:96.32:0,96,1503	0/0:27,0:27:75.17:0,75,1163	1/1:0,19:19:57.19:796,57,0	0/0:12,0:12:36.12:0,36,575	1/1:0,21:21:60.20:834,60,0	1/1:0,21:21:54.18:755,54,0	1/1:0,21:21:60.20:838,60,0	1/1:0,27:27:75.25:1046,75,0	1/1:0,24:24:72.21:985,72,0	1/1:0,17:17:51.17:712,51,0	1/1:0,17:17:45.08:601,45,0	1/1:0,23:23:69.23:964,69,0	1/1:0,17:17:42.10:564,42,0	0/0:24,0:24:69.24:0,69,1101	0/0:23,0:23:66.21:0,66,1030	1/1:0,18:18:45.15:628,45,0	1/1:0,31:31:93.24:1239,93,0	1/1:0,38:38:96.32:1341,96,0	1/1:0,6:6:9.03:126,9,0
chr10	65386198	.	C	CTTTTTAAATTTTT	9421.72	PASS	AB=0.571;AC=29;AF=0.580;AN=50;BaseQRankSum=8.568;DP=195;FS=22.077;HRun=0;HaplotypeScore=80.9245;InbreedingCoeff=0.7649;MQ=50.01;MQ0=0;MQRankSum=-9.512;QD=104.69;ReadPosRankSum=-0.606;VQSLOD=2.5632;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,1:2:6.02:280,6,0	./.	0/0:11,0:8:16.60:0,17,546	0/0:10,0:7:11.84:0,12,421	0/0:7,0:7:21.07:0,21,825	1/1:1,6:10:21.07:1371,21,0	1/1:4,0:3:6.02:326,6,0	0/0:20,0:20:48.12:0,48,1332	0/0:9,0:9:15.05:0,15,588	0/0:12,0:12:33.11:0,33,1178	0/0:11,0:11:33.10:0,33,1206	1/1:2,0:2:3.01:195,3,0	0/0:9,0:9:24.08:0,24,942	1/1:1,1:3:6.02:389,6,0	1/1:3,0:4:9.03:438,9,0	1/1:1,1:3:6.02:233,6,0	0/1:1,1:4:14.88:190,0,15	1/1:3,1:5:3.90:199,4,0	1/1:5,0:4:9.01:344,9,0	1/1:6,3:9:24.01:1102,24,0	./.	./.	0/0:4,0:4:9.03:0,9,354	0/0:10,0:10:27.09:0,27,1012	1/1:4,4:13:24.04:1262,24,0	1/1:3,4:9:24.05:1108,24,0	1/1:4,2:6:15.52:782,16,0	1/1:9,0:9:21.07:1202,21,0
chr10	65386202	.	T	TTA	598.48	PASS	AB=0.978;AC=19;AF=0.380;AN=50;BaseQRankSum=7.437;DP=162;FS=14.640;HRun=0;HaplotypeScore=51.0950;InbreedingCoeff=0.0842;MQ=51.82;MQ0=1;MQRankSum=-5.709;QD=10.69;ReadPosRankSum=2.779;VQSLOD=1.5556;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:2,0:2:11.93:20,0,12	./.	0/0:14,0:8:4.96:0,5,252	0/0:9,0:6:12.04:0,12,191	0/0:8,0:8:21.07:0,21,335	1/1:7,0:7:3.08:143,3,0	0/1:3,1:3:11.92:54,0,12	0/0:19,0:19:48.12:0,48,697	0/0:6,0:6:15.05:0,15,239	0/0:11,0:11:33.11:0,33,523	0/0:11,0:11:33.10:0,33,506	1/1:0,1:1:3.01:61,3,0	0/0:8,0:8:24.08:0,24,383	0/1:2,0:2:13.90:21,0,14	0/1:4,0:4:10.28:10,0,52	1/1:2,0:2:3:27,3,0	0/1:2,0:2:12.59:21,0,13	1/1:2,0:2:3:27,3,0	1/1:0,3:3:9.01:144,9,0	0/1:7,0:7:35.26:35,0,56	./.	./.	0/0:3,0:3:9.03:0,9,144	0/0:10,0:10:27.09:0,27,430	0/1:8,0:8:51.65:84,0,52	0/1:6,0:6:25.78:66,0,26	0/1:5,0:4:26.81:42,0,27	0/0:7,0:7:20.40:0,20,130
chr10	65386321	.	AAGAAG	A	919.62	PASS	AB=1.000;AC=29;AF=0.690;AN=42;BaseQRankSum=5.405;DP=275;FS=7.632;HRun=0;HaplotypeScore=56.1093;InbreedingCoeff=0.5281;MQ=57.94;MQ0=44;MQRankSum=-2.889;QD=5.71;ReadPosRankSum=-0.559;VQSLOD=0.4786;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	1/1:2,0:2:6.02:80,6,0	0/0:82,0:16:22.40:0,22,185	0/1:91,0:19:31.28:31,0,285	0/0:12,0:10:22.63:0,23,564	1/1:3,0:2:5.99:56,6,0	1/1:3,0:1:3.01:39,3,0	0/0:11,0:9:24.08:0,24,555	0/0:2,0:2:6.01:0,6,113	1/1:4,6:7:11.99:167,12,0	1/1:7,9:12:0.89:2,1,0	./.	0/0:2,0:2:6.02:0,6,168	1/1:3,0:1:3.01:39,3,0	./.	1/1:1,0:1:3.01:41,3,0	1/1:3,0:3:5.98:61,6,0	1/1:4,0:2:6:58,6,0	1/1:5,0:2:6:64,6,0	./.	./.	./.	0/0:2,0:1:3.01:0,3,50	./.	1/1:8,0:4:11.94:119,12,0	1/1:3,0:3:9.03:136,9,0	1/1:4,0:2:6.02:79,6,0	1/1:3,0:3:8.96:95,9,0
chr10	65386322	.	AGAAGAG	A	1131.43	PASS	AB=1.000;AC=25;AF=0.595;AN=42;BaseQRankSum=4.538;DP=273;FS=29.068;HRun=0;HaplotypeScore=57.8816;InbreedingCoeff=0.5668;MQ=60.12;MQ0=43;MQRankSum=-2.304;QD=23.09;ReadPosRankSum=0.115;VQSLOD=1.2303;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	1/1:0,2:2:6.02:119,6,0	0/0:82,0:16:41.03:0,41,379	0/0:95,0:20:17.06:0,17,479	0/0:12,0:10:12.44:0,12,723	1/1:3,0:2:6.02:84,6,0	1/1:1,1:1:3.01:59,3,0	0/0:10,0:9:27.02:0,27,785	0/0:2,0:2:6.02:0,6,176	0/1:9,0:7:16.62:22,0,17	0/0:15,0:11:5.59:0,6,26	./.	0/0:2,0:2:6.02:0,6,216	1/1:2,1:1:3.01:59,3,0	./.	1/1:0,1:1:3.01:61,3,0	1/1:2,1:3:6.02:101,6,0	1/1:4,0:2:6.02:86,6,0	1/1:3,1:2:6.02:105,6,0	./.	./.	./.	0/0:2,0:1:3.01:0,3,91	./.	1/1:5,3:4:12.04:199,12,0	1/1:1,2:3:8.92:130,9,0	1/1:2,2:2:6.02:119,6,0	1/1:2,1:3:9.03:141,9,0
chr10	65386341	.	AAG	A	1625.63	PASS	AB=1.000;AC=27;AF=0.643;AN=42;BaseQRankSum=3.416;DP=297;FS=34.960;HRun=0;HaplotypeScore=67.2526;InbreedingCoeff=0.6655;MQ=78.30;MQ0=12;MQRankSum=-5.602;QD=9.97;ReadPosRankSum=1.708;VQSLOD=1.6793;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,7:7:14.02:162,14,0	1/1:2,2:4:11.96:132,12,0	0/0:84,1:27:41.17:0,41,540	0/1:101,0:27:2.69:3,0,319	0/0:11,0:10:27.07:0,27,460	1/1:2,1:3:8.90:83,9,0	1/1:1,1:2:6.01:74,6,0	0/0:15,0:15:45.13:0,45,715	0/0:1,0:1:3.01:0,3,56	0/0:7,0:6:8.06:0,8,65	0/0:8,0:6:3.01:0,3,56	./.	0/0:2,0:2:6.02:0,6,112	1/1:1,0:1:3.01:37,3,0	./.	1/1:1,0:1:3.01:32,3,0	1/1:1,6:7:12.03:164,12,0	1/1:1,6:7:12.04:171,12,0	1/1:2,5:7:18.02:230,18,0	./.	./.	./.	./.	./.	1/1:1,6:6:15.01:194,15,0	1/1:3,4:7:6.16:251,6,0	1/1:1,2:3:9.02:117,9,0	1/1:1,4:5:9.03:132,9,0
chr10	65387056	.	GCCCCTTTAAGAAGTCCTC	G	12511.65	PASS	AB=0.600;AC=35;AF=0.625;AN=56;BaseQRankSum=13.599;DP=619;FS=1.398;HRun=0;HaplotypeScore=274.2995;InbreedingCoeff=0.8475;MQ=93.28;MQ0=0;MQRankSum=-9.680;QD=34.28;ReadPosRankSum=1.880;VQSLOD=3.4144;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:16,27:43:8.96:312,9,0	1/1:6,2:8:3.01:147,3,0	0/0:31,0:31:45.10:0,45,669	0/0:31,0:30:46.65:0,47,632	0/0:18,0:18:48.16:0,48,3146	1/1:2,12:14:18.06:763,18,0	1/1:17,0:17:39.06:799,39,0	0/0:33,0:33:51.15:0,51,1041	0/0:30,0:30:72.24:0,72,3557	0/0:24,0:24:51.17:0,51,3017	0/0:15,0:15:30.10:0,30,1494	1/1:5,27:32:26.93:1029,27,0	0/0:21,0:21:48.16:0,48,3113	1/1:5,9:14:9.03:403,9,0	1/1:7,16:23:15.05:591,15,0	1/1:4,18:22:18.06:803,18,0	1/1:10,17:27:8.84:429,9,0	1/1:12,0:12:27.01:518,27,0	1/1:12,10:22:30.04:720,30,0	1/1:4,16:20:27.02:720,27,0	1/1:23,0:23:17.99:391,18,0	1/1:9,10:19:11.57:188,12,0	0/0:22,0:22:57.20:0,57,3752	0/0:28,0:28:72.25:0,72,4258	1/1:3,15:18:18.06:747,18,0	0/1:7,14:21:99:1414,0,213	1/1:4,23:27:47.87:2280,48,0	1/1:0,3:3:6.02:258,6,0
chr10	65387073	.	TC	T	1772.47	PASS	AB=0.933;AC=24;AF=0.429;AN=56;BaseQRankSum=13.063;DP=557;FS=0.424;HRun=5;HaplotypeScore=120.8195;InbreedingCoeff=0.1876;MQ=94.69;MQ0=0;MQRankSum=-8.066;QD=6.15;ReadPosRankSum=6.652;VQSLOD=-0.6327;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:32,0:32:10.47:10,0,12	1/1:2,0:2:2.88:15,3,0	0/0:31,0:30:75.14:0,75,921	0/0:44,0:42:90.07:0,90,1115	0/0:22,0:22:63.20:0,63,842	0/1:12,0:12:28.37:45,0,28	0/1:4,13:17:3.81:363,0,4	0/0:29,0:29:78.22:0,78,998	0/0:28,0:28:84.28:0,84,1147	0/0:22,0:22:60.20:0,60,821	0/0:13,0:13:36.12:0,36,492	0/1:30,0:30:22.52:23,0,40	0/0:25,0:25:72.24:0,72,984	0/1:10,0:10:1.83:2,0,11	0/1:19,0:19:16.03:29,0,16	0/1:18,0:18:20.82:21,0,29	1/1:18,0:18:3.32:16,3,0	1/1:3,10:13:5.86:252,6,0	1/1:13,0:13:26.03:241,26,0	1/1:16,0:16:6.09:178,6,0	0/1:6,9:15:8.31:159,0,8	0/1:15,0:15:30.52:52,0,31	0/0:23,0:23:66.22:0,66,902	0/0:32,0:32:93.27:0,93,1247	0/1:16,0:16:5.04:96,0,5	0/1:15,0:15:1.50:279,0,1	1/1:23,1:24:36.09:162,36,0	0/1:3,0:3:3.73:4,0,15
chr10	65387792	.	AGCAG	A	20007.23	PASS	AB=0.533;AC=34;AF=0.607;AN=56;BaseQRankSum=12.282;DP=662;FS=3.161;HRun=0;HaplotypeScore=134.3863;InbreedingCoeff=0.8783;MQ=79.52;MQ0=2;MQRankSum=-6.638;QD=44.46;ReadPosRankSum=2.569;VQSLOD=5.5037;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,56:57:99:2498,132,0	1/1:0,10:10:30.06:543,30,0	0/0:26,0:26:63.22:0,63,1599	0/0:19,0:19:57.02:0,57,1275	0/0:18,0:18:51.16:0,51,1339	1/1:2,26:27:66.18:1240,66,0	1/1:1,22:23:54.10:969,54,0	0/0:18,0:18:48.16:0,48,1245	0/0:18,0:18:54.19:0,54,1441	0/0:19,0:19:54.19:0,54,1478	0/0:24,0:24:69.24:0,69,1871	1/1:2,21:23:57.19:1081,57,0	0/0:19,0:19:57.20:0,57,1550	1/1:2,23:25:63.21:1171,63,0	1/1:0,26:26:66.10:1164,66,0	0/1:2,16:18:99:876,0,110	1/1:2,32:34:63.21:1221,63,0	1/1:0,13:13:39.13:756,39,0	1/1:1,15:16:48.12:890,48,0	1/1:1,23:24:69.06:1117,69,0	1/1:2,48:48:99:1872,111,0	1/1:3,23:26:54.06:932,54,0	0/0:21,0:21:60.18:0,60,1620	0/0:30,0:30:84.29:0,84,2284	1/1:0,26:26:69.11:1222,69,0	0/1:4,26:30:0.96:1352,0,1	1/1:1,16:17:45.15:872,45,0	1/1:0,4:4:12.04:233,12,0
chr10	65388392	.	A	AG	19573.97	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=11.692;DP=610;FS=10.401;HRun=0;HaplotypeScore=131.1287;InbreedingCoeff=0.9908;MQ=66.53;MQ0=0;MQRankSum=-7.855;QD=43.40;ReadPosRankSum=0.949;VQSLOD=2.8976;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,38:40:99:1747,114,0	1/1:0,7:7:21.07:335,21,0	0/0:23,0:23:66.20:0,66,875	0/0:21,0:21:57.18:0,57,771	0/0:32,0:32:93.27:0,93,1266	1/1:0,27:27:78.27:1244,78,0	1/1:2,30:32:93.32:1483,93,0	1/1:2,20:22:60.17:909,60,0	0/0:18,0:18:54.17:0,54,740	1/1:1,25:26:75.23:1175,75,0	1/1:0,17:17:48.16:767,48,0	1/1:0,26:26:72.25:1149,72,0	0/0:18,0:18:54.18:0,54,755	1/1:0,17:17:48.16:756,48,0	1/1:1,23:24:63.15:966,63,0	1/1:2,22:24:15.17:790,15,0	1/1:0,21:21:54.18:862,54,0	1/1:0,20:20:57.19:909,57,0	1/1:1,17:18:51.17:814,51,0	1/1:0,14:14:39.13:622,39,0	1/1:2,26:28:72.18:1119,72,0	1/1:0,12:12:36.12:574,36,0	0/0:17,0:17:48.12:0,48,649	0/0:30,0:30:90.28:0,90,1226	1/1:0,12:12:33.04:497,33,0	1/1:0,34:34:99:1557,99,0	1/1:2,24:26:72.18:1109,72,0	1/1:0,4:4:12.04:191,12,0
chr10	65388573	.	GT	G	10111.36	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=18.465;DP=538;FS=6.330;HRun=2;HaplotypeScore=117.7204;InbreedingCoeff=0.9989;MQ=75.84;MQ0=0;MQRankSum=-12.689;QD=33.82;ReadPosRankSum=3.416;VQSLOD=4.3154;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,21:21:45.15:583,45,0	1/1:0,11:11:33.06:409,33,0	0/0:13,0:13:33.11:0,33,494	0/0:15,0:15:45.03:0,45,566	0/0:34,0:34:99:0,102,1508	1/1:1,23:24:57.10:716,57,0	1/1:3,16:19:42.14:544,42,0	0/0:34,0:35:96.28:0,96,1334	0/0:29,0:29:84.28:0,84,1257	0/0:31,0:31:93.32:0,93,1394	0/0:21,0:21:63.19:0,63,921	1/1:0,17:17:51.08:639,51,0	0/0:17,0:17:51.15:0,51,726	1/1:0,7:7:21:251,21,0	1/1:0,13:13:39.13:506,39,0	1/1:0,19:19:51.03:619,51,0	1/1:0,14:14:39.13:506,39,0	1/1:2,8:10:24.08:310,24,0	1/1:1,12:13:36.11:460,36,0	1/1:1,22:23:66.17:836,66,0	1/1:2,15:17:36.12:467,36,0	1/1:2,20:22:51.17:660,51,0	0/0:25,0:25:75.25:0,75,1124	0/0:19,0:19:57.19:0,57,854	1/1:0,18:18:54.18:699,54,0	1/1:0,13:13:39.13:506,39,0	1/1:0,22:22:66.21:855,66,0	1/1:0,16:16:42.14:545,42,0
chr10	65388756	.	TG	T	935.93	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-1.869;DP=725;FS=3.479;HRun=4;HaplotypeScore=138.9341;InbreedingCoeff=0.9822;MQ=85.02;MQ0=0;MQRankSum=2.293;QD=31.20;ReadPosRankSum=-3.809;VQSLOD=1.0709;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,138,1905	0/0:18,0:18:51.17:0,51,702	0/0:27,0:27:81.24:0,81,1085	0/0:27,0:27:75.16:0,75,992	0/0:27,0:27:81.14:0,81,1105	0/0:23,0:23:63.21:0,63,880	0/0:36,0:36:99:0,108,1467	1/1:0,30:30:87.25:1031,87,0	0/0:34,0:34:96.31:0,96,1327	0/0:28,0:28:81.27:0,81,1134	0/0:8,0:8:24.08:0,24,336	0/0:28,0:28:78.22:0,78,1068	0/0:12,0:12:36.12:0,36,504	0/0:31,0:31:90.21:0,90,1210	0/0:25,0:25:66.18:0,66,886	0/0:15,0:15:39.09:0,39,523	0/0:36,0:36:99:0,102,1428	0/0:23,0:23:63.21:0,63,879	0/0:14,0:14:36.12:0,36,502	0/0:19,0:19:57.19:0,57,797	0/0:51,0:51:99:0,150,2083	0/0:24,0:24:69.19:0,69,943	0/0:18,0:18:51.17:0,51,714	0/0:33,0:33:93.31:0,93,1302	0/0:31,0:31:93.27:0,93,1279	0/0:28,0:28:81.27:0,81,1133	0/0:25,0:25:63.17:0,63,848	0/0:5,0:5:15.05:0,15,210
chr10	65388915	.	GC	G	2405.78	PASS	AB=0.642;AC=25;AF=0.446;AN=56;BaseQRankSum=15.959;DP=505;FS=1.107;HRun=2;HaplotypeScore=153.7044;InbreedingCoeff=0.2438;MQ=85.43;MQ0=1;MQRankSum=-15.019;QD=8.65;ReadPosRankSum=4.831;VQSLOD=1.4343;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:11,14:25:15.23:135,0,15	1/1:1,4:5:11.58:64,12,0	0/0:31,0:31:55.39:0,55,1046	0/0:26,0:26:58.57:0,59,913	0/0:18,0:18:54.18:0,54,799	1/1:4,14:17:30.11:233,30,0	0/1:7,18:25:17.49:242,0,17	0/0:29,0:29:87.29:0,87,1278	0/0:15,0:15:45.14:0,45,654	0/0:22,0:22:66.22:0,66,970	0/0:19,0:19:57.17:0,57,803	1/1:9,16:25:60.06:344,60,0	0/0:14,0:14:39.13:0,39,582	1/1:1,18:19:39.76:273,40,0	1/1:1,9:10:28.78:159,29,0	1/1:1,12:13:20.66:184,21,0	0/1:6,10:15:14.45:123,0,14	1/1:8,6:14:13.06:137,13,0	0/1:6,9:15:66.99:121,0,67	0/1:4,4:8:9.58:43,0,10	0/1:13,6:19:40.11:55,0,40	0/1:4,6:10:15.66:73,0,16	0/0:19,0:19:57.19:0,57,846	0/0:34,0:34:98.93:0,99,1480	0/1:12,10:22:32.01:112,0,32	0/1:4,6:10:68.16:79,0,68	0/1:8,8:16:21.76:144,0,22	0/1:2,6:8:1.64:83,0,2
chr10	65388919	.	TGGGGAGATG	T	13377.41	PASS	AB=0.647;AC=28;AF=0.500;AN=56;BaseQRankSum=16.864;DP=493;FS=17.283;HRun=0;HaplotypeScore=192.7356;InbreedingCoeff=0.4439;MQ=84.64;MQ0=1;MQRankSum=-15.795;QD=50.29;ReadPosRankSum=6.478;VQSLOD=2.9313;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:10,14:24:1.69:948,0,2	1/1:0,4:4:12.04:299,12,0	0/0:30,0:31:87.09:0,87,2928	0/0:25,0:25:71.74:0,72,2948	0/0:20,0:20:57.14:0,57,2584	1/1:3,14:16:32.93:1036,33,0	1/1:7,18:25:14.66:1306,15,0	0/0:27,0:27:78.26:0,78,3762	0/0:15,0:15:45.14:0,45,1966	0/0:22,0:22:66.20:0,66,2822	0/0:16,0:16:48.16:0,48,2304	1/1:8,16:24:8.70:1364,9,0	0/0:16,0:16:48.13:0,48,2169	1/1:1,18:19:45.90:1335,46,0	1/1:1,9:10:30.10:741,30,0	1/1:1,12:13:38.72:916,39,0	0/1:5,10:14:15.25:668,0,15	0/1:6,6:12:17.80:511,0,18	0/1:6,9:15:29.60:665,0,30	1/1:4,4:8:8.23:394,8,0	0/1:9,6:15:28.31:342,0,28	1/1:3,9:12:9.42:389,9,0	0/0:20,0:20:60.21:0,60,2931	0/0:35,0:35:99:0,102,4395	0/1:11,10:21:14.69:949,0,15	0/1:4,6:10:99:460,0,151	0/1:6,8:14:6.32:595,0,6	1/1:2,6:8:18.95:459,19,0
chr10	65390623	.	A	ATTCTTTT	9286.89	PASS	AB=0.790;AC=36;AF=0.643;AN=56;BaseQRankSum=3.247;DP=502;FS=35.348;HRun=0;HaplotypeScore=169.4103;InbreedingCoeff=0.8172;MQ=49.18;MQ0=6;MQRankSum=-7.380;QD=25.51;ReadPosRankSum=-6.237;VQSLOD=2.0559;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:32:55.87:928,56,0	1/1:10,0:9:19.29:353,19,0	0/0:10,0:6:18.05:0,18,255	0/0:9,0:5:6.49:0,6,102	0/0:19,0:21:47.46:0,47,901	1/1:14,0:16:41.98:732,42,0	1/1:7,0:14:16.64:240,17,0	0/0:9,0:19:41.99:0,42,605	0/0:3,0:11:12.16:0,12,274	0/0:6,0:13:33.01:0,33,491	0/0:3,0:11:23.34:0,23,309	1/1:22,0:21:53.44:635,53,0	0/1:4,0:10:10.80:11,0,67	1/1:5,0:15:14.92:230,15,0	1/1:23,0:23:49.16:562,49,0	1/1:8,0:14:19.09:289,19,0	1/1:18,0:29:18.57:443,19,0	1/1:10,0:22:33.56:586,34,0	1/1:30,0:28:64.24:737,64,0	1/1:11,9:23:50.79:719,51,0	1/1:15,0:15:32.60:338,33,0	1/1:14,0:14:34.69:489,35,0	0/0:12,0:12:20.36:0,20,314	0/0:30,0:31:49.32:0,49,1353	1/1:16,0:19:38.92:519,39,0	0/1:19,0:21:17.24:801,0,17	1/1:14,0:19:36.29:594,36,0	1/1:10,0:9:10.50:84,10,0
chr10	65390625	.	T	TC	1942.50	PASS	AB=0.877;AC=19;AF=0.339;AN=56;BaseQRankSum=-2.146;DP=484;FS=28.938;HRun=0;HaplotypeScore=152.7522;InbreedingCoeff=-0.2283;MQ=46.66;MQ0=8;MQRankSum=-0.555;QD=6.03;ReadPosRankSum=5.934;VQSLOD=1.2539;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:19,10:28:99:126,0,101	1/1:6,4:9:3.03:73,3,0	0/0:10,0:6:18.03:0,18,193	0/0:8,0:4:6.02:0,6,74	0/0:21,0:21:59.85:0,60,633	0/1:10,6:16:13.80:186,0,14	0/1:14,2:13:8.48:43,0,8	0/0:18,0:18:53.83:0,54,438	0/0:12,0:12:20.78:0,21,166	0/0:12,0:11:32.88:0,33,264	0/0:11,0:11:27.52:0,28,203	0/1:20,1:20:42.94:188,0,43	0/0:11,0:11:14.08:0,14,75	0/1:14,0:14:7.35:23,0,7	0/1:20,2:22:16.35:178,0,16	0/0:14,0:14:3.27:0,3,80	0/1:23,3:24:28.70:29,0,74	0/1:19,3:22:19.13:89,0,19	0/1:24,5:27:33.07:215,0,33	0/1:16,2:18:62.05:126,0,62	1/1:12,3:15:8.99:166,9,0	0/1:10,4:14:62.54:113,0,63	0/0:13,0:13:29.85:0,30,275	0/0:32,0:32:72.47:0,72,850	0/1:18,1:19:25.47:126,0,25	0/1:18,4:22:13.91:304,0,14	0/1:14,4:17:35.40:87,0,35	0/1:11,0:9:26.24:35,0,26
chr10	65390638	.	T	TTTTTTG	8619.35	PASS	AB=1.000;AC=35;AF=0.625;AN=56;BaseQRankSum=-4.934;DP=475;FS=7.283;HRun=0;HaplotypeScore=109.8212;InbreedingCoeff=0.8608;MQ=42.23;MQ0=16;MQRankSum=-4.700;QD=27.02;ReadPosRankSum=0.245;VQSLOD=3.5562;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,1:24:42.38:998,42,0	1/1:7,1:10:23.87:378,24,0	0/0:6,0:3:8.97:0,9,84	0/0:6,0:4:6.02:0,6,78	0/0:22,0:22:58.37:0,58,786	1/1:10,1:15:27.62:722,28,0	1/1:13,0:11:21.27:259,21,0	0/0:22,0:22:22.33:0,22,474	0/0:14,0:14:35.63:0,36,336	0/0:15,0:13:32.78:0,33,366	0/0:12,0:12:20.75:0,21,213	1/1:18,0:19:23.95:358,24,0	0/0:13,0:12:19.94:0,20,127	1/1:12,0:12:20.37:266,20,0	1/1:16,1:19:40.83:477,41,0	0/1:13,0:13:9.68:184,0,10	1/1:24,0:24:46.47:534,46,0	1/1:18,0:20:35.83:538,36,0	1/1:13,0:20:44.54:605,45,0	1/1:12,0:14:41.55:451,42,0	1/1:8,0:12:26.85:284,27,0	1/1:9,1:14:38.70:570,39,0	0/0:13,0:13:23.53:0,24,268	0/0:33,0:33:83.08:0,83,1196	1/1:17,0:18:18.09:394,18,0	1/1:4,16:26:0.31:838,0,0	1/1:17,0:19:51.13:671,51,0	1/1:10,0:6:11.91:95,12,0
chr10	65391565	.	TCCCTC	T	9056.75	PASS	AB=0.658;AC=35;AF=0.625;AN=56;BaseQRankSum=16.966;DP=538;FS=18.109;HRun=0;HaplotypeScore=170.6084;InbreedingCoeff=0.9108;MQ=85.42;MQ0=0;MQRankSum=-17.099;QD=28.30;ReadPosRankSum=4.697;VQSLOD=3.4614;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,12:22:48.12:571,48,0	1/1:3,3:6:9.03:119,9,0	0/0:23,0:23:60.20:0,60,1704	0/0:26,0:26:75.21:0,75,2066	0/0:27,0:27:78.27:0,78,2427	1/1:4,17:21:54.16:675,54,0	1/1:4,9:13:30.08:363,30,0	0/0:20,0:20:57.17:0,57,1660	0/0:16,0:16:48.16:0,48,1503	0/0:27,0:27:78.26:0,78,2271	0/0:18,0:18:48.16:0,48,1501	1/1:6,24:30:75.23:941,75,0	0/0:19,0:19:51.18:0,51,1542	1/1:2,17:19:51.16:626,51,0	1/1:7,15:22:51.14:619,51,0	1/1:8,15:23:51.15:650,51,0	1/1:3,8:10:21.07:267,21,0	1/1:3,5:8:18.06:276,18,0	1/1:7,5:12:18.02:248,18,0	1/1:8,14:22:48.07:559,48,0	1/1:5,7:12:16.87:199,17,0	1/1:5,13:18:42.11:484,42,0	0/0:12,0:12:33.11:0,33,1028	0/0:30,0:30:84.24:0,84,2404	1/1:3,20:23:60.19:768,60,0	0/1:12,13:25:99:600,0,138	1/1:3,18:21:57.18:747,57,0	1/1:2,9:11:25.33:345,25,0
chr10	65391574	.	A	AGTG	12706.65	PASS	AB=0.588;AC=35;AF=0.625;AN=56;BaseQRankSum=17.788;DP=493;FS=28.151;HRun=0;HaplotypeScore=145.7793;InbreedingCoeff=0.9123;MQ=88.55;MQ0=0;MQRankSum=-17.812;QD=45.22;ReadPosRankSum=3.133;VQSLOD=4.0920;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,12:16:48.16:793,48,0	1/1:0,3:3:9.03:148,9,0	0/0:23,0:23:66.20:0,66,1160	0/0:27,0:27:47.97:0,48,1182	0/0:26,0:26:78.27:0,78,1437	1/1:1,18:19:54.18:890,54,0	1/1:6,9:14:42.14:668,42,0	0/0:18,0:18:54.16:0,54,966	0/0:18,0:18:51.15:0,51,917	0/0:27,0:27:81.28:0,81,1508	0/0:19,0:19:51.17:0,51,942	1/1:2,24:26:75.26:1221,75,0	0/0:16,0:16:45.15:0,45,833	1/1:6,17:23:60.20:947,60,0	1/1:3,15:18:51.17:819,51,0	1/1:2,15:17:51.17:878,51,0	1/1:2,8:9:27.09:433,27,0	1/1:0,5:5:15.05:287,15,0	1/1:4,5:9:21.07:424,21,0	1/1:5,13:19:45.14:699,45,0	1/1:5,7:12:32.47:482,32,0	1/1:2,12:15:42.14:635,42,0	0/0:12,0:12:36.12:0,36,671	0/0:26,0:26:78.25:0,78,1421	1/1:4,20:24:66.23:1097,66,0	0/1:6,14:19:57.70:865,0,58	1/1:0,20:19:57.19:931,57,0	1/1:1,8:10:27.09:492,27,0
chr10	65391651	.	G	GTTGTTTGTTTGT	22282.91	PASS	AB=0.667;AC=35;AF=0.648;AN=54;BaseQRankSum=-7.099;DP=614;FS=11.886;HRun=0;HaplotypeScore=215.8837;InbreedingCoeff=0.8704;MQ=60.21;MQ0=1;MQRankSum=-13.192;QD=59.58;ReadPosRankSum=-4.912;VQSLOD=2.0155;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,5:18:21.54:1036,22,0	1/1:4,4:12:9.03:533,9,0	0/0:25,0:23:37.13:0,37,968	0/0:20,0:17:26.77:0,27,625	0/0:25,0:25:66.19:0,66,2186	1/1:7,13:28:66.21:3160,66,0	1/1:9,4:13:9.03:411,9,0	1/1:23,0:29:8.36:164,8,0	0/0:24,0:24:45.15:0,45,1574	0/0:21,0:21:42.14:0,42,1285	0/0:30,0:30:78.26:0,78,2541	1/1:9,8:20:39.13:1856,39,0	0/0:26,0:26:66.22:0,66,1988	1/1:11,9:27:30.10:1759,30,0	1/1:11,1:15:15.05:538,15,0	1/1:11,8:20:33.08:1731,33,0	1/1:7,2:11:20.10:848,20,0	1/1:8,2:15:24.04:857,24,0	1/1:14,1:20:24.08:655,24,0	1/1:13,10:33:39.07:1843,39,0	1/1:5,0:6:6.02:102,6,0	1/1:6,10:22:21.07:1242,21,0	0/0:20,0:20:45.15:0,45,1435	0/0:43,0:43:99:0,108,3559	1/1:13,11:25:27.09:1598,27,0	0/1:14,4:27:57.88:1691,0,58	1/1:11,8:24:51.17:2257,51,0	./.
chr10	65391740	.	GA	G	8547.13	PASS	AB=0.583;AC=35;AF=0.625;AN=56;BaseQRankSum=12.770;DP=669;FS=24.702;HRun=8;HaplotypeScore=71.7571;InbreedingCoeff=0.8928;MQ=61.35;MQ0=11;MQRankSum=-5.313;QD=23.29;ReadPosRankSum=4.162;VQSLOD=3.4826;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,30:31:75.11:724,75,0	1/1:2,6:8:18.03:174,18,0	0/0:50,0:13:2.73:0,3,264	0/0:53,0:20:26.62:0,27,446	0/0:29,0:29:87.27:0,87,1048	1/1:4,26:30:72.10:695,72,0	1/1:1,17:17:48.08:463,48,0	0/0:35,0:35:87.23:0,87,1032	0/0:16,0:16:45.14:0,45,541	0/0:26,0:26:69.19:0,69,814	0/0:24,0:24:66.14:0,66,767	1/1:2,17:19:48.08:463,48,0	0/0:24,0:24:60.17:0,60,711	1/1:2,12:14:30.04:289,30,0	1/1:1,19:20:51.08:492,51,0	1/1:0,22:22:54.06:521,54,0	1/1:1,27:27:66.10:637,66,0	1/1:3,17:20:45.07:434,45,0	1/1:1,10:10:27.03:256,27,0	1/1:5,12:17:39.06:377,39,0	1/1:2,25:27:66.99:639,67,0	1/1:1,22:23:60.09:579,60,0	0/0:21,0:21:60.17:0,60,711	0/0:22,0:22:48.15:0,48,578	1/1:0,26:26:78.13:753,78,0	0/1:6,15:20:57.41:354,0,57	1/1:5,21:25:57.08:550,57,0	1/1:1,5:6:15.02:145,15,0
chr10	65392485	.	TG	T	949.15	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.409;DP=729;FS=5.678;HRun=4;HaplotypeScore=83.4622;InbreedingCoeff=0.9947;MQ=82.21;MQ0=0;MQRankSum=-2.850;QD=32.73;ReadPosRankSum=-4.391;VQSLOD=2.0292;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,114,1572	0/0:9,0:9:24.08:0,24,336	0/0:24,0:24:69.23:0,69,940	0/0:28,0:28:27.22:0,27,947	0/0:21,0:21:63.20:0,63,857	0/0:16,0:16:39.11:0,39,513	0/0:41,0:41:99:0,117,1584	1/1:0,29:29:87.27:1044,87,0	0/0:37,0:37:99:0,102,1428	0/0:22,0:22:63.21:0,63,880	0/0:13,0:13:36.12:0,36,503	0/0:34,0:34:99:0,99,1386	0/0:38,0:38:99:0,114,1595	0/0:28,0:28:81.25:0,81,1114	0/0:21,0:21:63.21:0,63,882	0/0:20,0:20:57.19:0,57,798	0/0:49,0:49:99:0,144,1998	0/0:15,0:15:45.11:0,45,608	0/0:22,0:22:63.17:0,63,831	0/0:18,0:18:54.17:0,54,739	0/0:57,0:57:99:0,166,2309	0/0:21,0:21:60.17:0,60,816	0/0:14,0:14:36.11:0,36,488	0/0:32,0:32:96.32:0,96,1334	0/0:19,0:19:54.18:0,54,756	0/0:27,0:27:81.27:0,81,1131	0/0:27,0:27:75.23:0,75,1030	0/0:9,0:9:24.08:0,24,336
chr10	65394031	.	T	TC	15366.05	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-5.005;DP=722;FS=2.463;HRun=3;HaplotypeScore=108.2693;InbreedingCoeff=0.9911;MQ=82.54;MQ0=0;MQRankSum=-4.609;QD=33.77;ReadPosRankSum=3.923;VQSLOD=4.7405;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,37:43:99:1338,102,0	1/1:3,15:18:42.14:587,42,0	0/0:23,0:23:57.14:0,57,647	0/0:30,0:30:74.65:0,75,811	0/0:23,0:23:69.20:0,69,815	1/1:2,20:22:57.09:737,57,0	1/1:2,23:25:63:773,63,0	0/0:37,0:37:96.28:0,96,1141	0/0:34,0:34:96.27:0,96,1129	0/0:25,0:25:69.19:0,69,810	0/0:18,0:18:54.16:0,54,642	1/1:0,16:16:45.11:608,45,0	0/0:29,0:29:84.23:0,84,985	1/1:3,19:22:57.13:753,57,0	1/1:5,34:39:96.23:1283,96,0	1/1:3,22:25:24.16:740,24,0	1/1:1,29:30:87.25:1191,87,0	1/1:1,12:13:36.12:501,36,0	1/1:5,24:29:75.24:1032,75,0	1/1:0,34:34:84.28:1175,84,0	1/1:5,19:24:60.63:816,61,0	1/1:3,25:28:54.16:722,54,0	0/0:22,0:22:66.18:0,66,769	0/0:26,0:26:69.17:0,69,812	1/1:1,18:19:48.16:672,48,0	1/1:1,31:32:96.32:1333,96,0	1/1:4,29:33:75.12:979,75,0	1/1:0,3:3:9.03:126,9,0
chr10	65394080	.	C	CG	18598.87	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-2.350;DP=747;FS=1.231;HRun=2;HaplotypeScore=100.6822;InbreedingCoeff=0.9845;MQ=80.07;MQ0=0;MQRankSum=-9.400;QD=39.74;ReadPosRankSum=0.923;VQSLOD=4.7633;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,38:39:99:1550,105,0	1/1:1,14:15:39.09:558,39,0	0/0:20,0:21:56.35:0,56,713	0/0:20,0:21:53.73:0,54,610	0/0:36,0:36:99:0,105,1349	1/1:1,20:21:57.19:852,57,0	1/1:2,30:32:81.27:1211,81,0	0/0:25,0:25:72.19:0,72,870	0/0:34,0:34:96.31:0,96,1244	0/0:33,0:33:99:0,99,1251	0/0:24,0:24:66.20:0,66,842	1/1:1,14:15:42.13:610,42,0	0/0:26,0:26:72.23:0,72,934	1/1:2,17:19:51.13:736,51,0	1/1:1,30:31:81.22:1166,81,0	1/1:2,30:32:90.29:1320,90,0	1/1:2,35:37:99:1604,108,0	1/1:0,17:17:51.17:763,51,0	1/1:4,22:26:69.22:1000,69,0	1/1:7,17:24:69.18:949,69,0	1/1:3,23:26:66.22:977,66,0	1/1:3,24:27:72.22:1039,72,0	0/0:25,0:25:72.23:0,72,932	0/0:33,0:33:96.31:0,96,1246	1/1:2,25:27:72.22:1049,72,0	1/1:5,32:37:99:1465,105,0	1/1:0,40:40:99:1659,111,0	1/1:0,3:3:6.02:90,6,0
chr10	65394578	.	TGCGCGCGC	T	4475.04	PASS	AB=0.848;AC=28;AF=0.519;AN=54;BaseQRankSum=3.647;DP=420;FS=8.698;HRun=0;HaplotypeScore=123.2282;InbreedingCoeff=0.2489;MQ=78.69;MQ0=13;MQRankSum=-2.867;QD=16.16;ReadPosRankSum=3.913;VQSLOD=2.8923;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:19,3:23:17.62:329,18,0	./.	0/1:14,0:13:54.24:54,0,107	0/1:21,0:18:71.91:72,0,131	0/0:18,0:17:24.08:0,24,792	1/1:15,0:15:15.07:332,15,0	1/1:9,6:15:9.03:225,9,0	0/0:20,0:18:35.62:0,36,568	0/0:11,0:11:18.06:0,18,464	0/0:19,0:19:31.01:0,31,822	0/0:8,0:8:2.86:0,3,46	1/1:16,1:17:5.44:147,5,0	0/0:10,0:9:24.04:0,24,550	0/0:8,1:8:3.48:0,3,36	0/1:18,4:23:35.64:277,0,36	1/1:7,2:8:9.50:159,10,0	0/1:9,1:11:20.17:65,0,20	0/1:21,2:23:14.80:482,0,15	0/1:8,6:14:92:398,0,92	1/1:6,6:12:3.01:82,3,0	1/1:21,6:23:21.48:414,21,0	1/1:4,0:3:3:26,3,0	0/0:7,0:7:12.04:0,12,292	0/0:34,0:34:96.30:0,96,3238	1/1:6,3:9:6.05:131,6,0	1/1:12,5:17:0.41:788,0,0	0/1:7,4:12:50.12:319,0,50	0/1:8,1:8:2.05:175,0,2
chr10	65394581	.	G	GCA	232.29	PASS	AB=1.000;AC=6;AF=0.111;AN=54;BaseQRankSum=-3.496;DP=400;FS=5.505;HRun=0;HaplotypeScore=110.0513;InbreedingCoeff=0.2473;MQ=70.18;MQ0=15;MQRankSum=0.278;QD=3.52;ReadPosRankSum=-2.174;VQSLOD=1.9804;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:20.48:0,20,186	./.	0/0:10,0:8:12.16:0,12,110	0/1:17,0:14:4.47:4,0,90	0/0:15,0:14:27.06:0,27,351	0/0:13,0:13:24.02:0,24,250	0/0:15,0:15:12:0,12,110	1/1:4,14:16:35.86:322,36,0	0/1:9,0:9:2.29:2,0,8	0/0:17,0:17:9.49:0,9,149	0/0:8,0:8:3:0,3,25	0/0:17,0:17:8.75:0,9,93	0/0:10,0:9:24.04:0,24,287	0/1:10,0:9:7.24:7,0,19	0/0:22,0:22:24.04:0,24,262	0/0:10,0:9:8.91:0,9,68	0/1:11,0:11:0.26:0,0,74	0/0:22,0:22:35.70:0,36,300	0/0:14,0:14:26.33:0,26,195	0/0:12,0:12:6:0,6,55	0/0:27,0:22:19.31:0,19,185	0/0:3,0:2:2.99:0,3,24	0/0:8,0:8:12.03:0,12,155	0/0:36,0:35:96.21:0,96,1301	0/0:9,0:9:6.01:0,6,60	0/0:17,0:17:38.65:0,39,299	0/0:12,0:12:20.68:0,21,213	0/0:9,0:8:14.65:0,15,115
chr10	65394582	.	C	CGT	406.55	PASS	AB=0.984;AC=21;AF=0.389;AN=54;BaseQRankSum=3.662;DP=394;FS=1.554;HRun=0;HaplotypeScore=107.4904;InbreedingCoeff=0.2675;MQ=68.91;MQ0=17;MQRankSum=-1.421;QD=2.19;ReadPosRankSum=-0.882;VQSLOD=2.2992;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:24:3.77:43,4,0	./.	0/0:10,0:8:11.02:0,11,81	0/0:17,0:13:4.03:0,4,67	0/0:15,0:14:24.02:0,24,314	1/1:13,0:13:3.70:28,4,0	0/0:15,0:15:0.20:0,0,0	0/0:17,0:14:17.75:0,18,135	0/1:9,0:9:3.79:4,0,8	0/0:17,0:17:2.29:0,2,82	0/0:8,0:8:2.98:0,3,21	0/0:6,10:16:4.41:0,4,24	0/0:10,0:9:24.04:0,24,273	1/1:9,1:9:3.01:41,3,0	0/1:21,0:21:20.11:30,0,20	1/1:8,0:7:7.94:56,8,0	1/1:11,0:11:3.92:45,4,0	0/1:21,2:23:14.64:153,0,15	0/1:11,0:11:22.22:22,0,54	0/0:12,0:12:0.47:0,0,1	1/1:27,0:21:3.87:41,4,0	1/1:2,1:2:3:26,3,0	0/0:8,0:8:12:0,12,141	0/0:36,0:35:96.25:0,96,1303	0/0:9,0:8:4.28:0,4,21	0/1:17,0:17:18.34:18,0,31	0/0:13,0:13:4.63:0,5,24	1/1:9,0:8:0.89:53,1,0
chr10	65394622	.	TGTGTGTGTGTGTGC	T	296.80	PASS	AB=0.955;AC=6;AF=0.111;AN=54;BaseQRankSum=1.366;DP=432;FS=3.677;HRun=0;HaplotypeScore=160.7562;InbreedingCoeff=0.5006;MQ=44.88;MQ0=30;MQRankSum=0.874;QD=6.75;ReadPosRankSum=-0.913;VQSLOD=2.5942;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:19:24.55:0,25,997	0/0:6,0:3:0.47:0,0,1	1/1:3,0:1:2.92:17,3,0	./.	0/0:15,0:14:27.08:0,27,1000	0/0:11,0:11:20.77:0,21,715	0/0:22,0:21:28.38:0,28,943	0/1:14,0:9:42.22:42,0,406	0/0:7,0:7:6.47:0,6,133	1/1:5,12:16:3.49:339,3,0	0/1:9,1:10:0:0,0,0	0/0:25,0:24:15.99:0,16,559	0/0:11,0:10:20.84:0,21,829	0/0:14,0:13:6.49:0,6,357	0/0:17,0:17:20.90:0,21,894	0/0:14,0:13:11.81:0,12,471	0/0:18,0:16:23.71:0,24,553	0/0:25,0:25:53.38:0,53,2157	0/0:16,0:15:29.34:0,29,777	0/0:6,0:6:0.47:0,0,1	0/0:31,0:25:20.95:0,21,670	0/0:8,0:7:5.05:0,5,155	0/0:10,0:10:20.99:0,21,811	0/0:52,0:51:99:0,138,5893	0/0:13,0:12:15.05:0,15,642	0/0:17,0:16:42.04:0,42,1380	0/0:13,0:13:30.31:0,30,1156	0/0:13,0:11:24.05:0,24,660
chr10	65394624	.	TGTGTGTGTGTGC	T	352.08	PASS	AB=0.765;AC=6;AF=0.111;AN=54;BaseQRankSum=1.335;DP=420;FS=3.645;HRun=0;HaplotypeScore=147.8407;InbreedingCoeff=0.5564;MQ=44.89;MQ0=28;MQRankSum=1.046;QD=8.19;ReadPosRankSum=-1.201;VQSLOD=2.3899;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:18:21.54:0,22,809	0/0:6,0:3:0.47:0,0,1	1/1:3,0:1:2.92:17,3,0	./.	0/0:14,0:13:24:0,24,796	0/0:9,0:9:15.05:0,15,615	0/0:19,0:18:24.96:0,25,782	0/1:14,0:9:45.23:45,0,288	0/0:7,0:7:6.47:0,6,108	1/1:17,0:16:38.81:403,39,0	0/1:1,8:9:0:0,0,0	0/0:25,0:25:15.73:0,16,459	0/0:11,0:10:20.70:0,21,707	0/0:14,0:13:6.49:0,6,330	0/0:16,0:16:17.98:0,18,743	0/0:14,0:13:11.76:0,12,399	0/0:18,0:16:23.69:0,24,469	0/0:25,0:25:53.29:0,53,1857	0/0:16,0:15:28.66:0,29,666	0/0:6,0:6:0.47:0,0,1	0/0:30,0:25:20.86:0,21,569	0/0:8,0:7:5.05:0,5,133	0/0:10,0:10:20.99:0,21,671	0/0:51,0:50:99:0,138,4985	0/0:13,0:12:15.52:0,16,553	0/0:17,0:16:42:0,42,1118	0/0:14,0:14:29.84:0,30,952	0/0:11,0:9:21.81:0,22,508
chr10	65394688	.	TATGCAG	T	5229.93	PASS	AB=0.538;AC=35;AF=0.625;AN=56;BaseQRankSum=9.075;DP=333;FS=7.928;HRun=0;HaplotypeScore=92.6113;InbreedingCoeff=0.7671;MQ=79.33;MQ0=0;MQRankSum=-11.286;QD=32.09;ReadPosRankSum=2.342;VQSLOD=4.1043;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,14:19:6.32:140,6,0	1/1:1,6:7:9.03:209,9,0	0/0:15,0:15:30.91:0,31,1105	0/0:25,0:26:21.77:0,22,1489	0/0:16,0:16:45.15:0,45,1471	1/1:2,8:10:12.04:279,12,0	1/1:1,12:13:21.07:489,21,0	0/0:24,0:24:66.23:0,66,2211	0/0:5,0:5:9.03:0,9,317	0/0:18,0:18:48.16:0,48,1490	0/0:8,0:8:12.04:0,12,418	1/1:0,6:6:12.04:279,12,0	0/0:6,0:6:18.06:0,18,634	1/1:1,10:11:8.90:209,9,0	1/1:1,11:12:9.03:209,9,0	1/1:1,2:3:6.02:140,6,0	1/1:1,11:12:15.05:349,15,0	1/1:3,5:8:9.02:210,9,0	1/1:1,14:15:42.12:869,42,0	1/1:1,8:9:5.71:139,6,0	1/1:1,3:4:3.31:70,3,0	1/1:0,3:3:6.02:139,6,0	0/0:10,0:10:30.10:0,30,969	0/0:42,0:42:99:0,99,3439	1/1:0,5:5:12.04:279,12,0	0/1:2,12:14:57.86:730,0,58	1/1:2,7:9:11.91:279,12,0	1/1:0,3:3:9.03:209,9,0
chr10	65395354	.	GCC	G	488.29	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-5.677;DP=520;FS=0.000;HRun=11;HaplotypeScore=150.2030;InbreedingCoeff=0.9176;MQ=64.92;MQ0=1;MQRankSum=0.651;QD=19.53;ReadPosRankSum=-2.022;VQSLOD=1.0632;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,111,1151	0/0:7,0:7:21.06:0,21,250	0/0:10,0:10:13.86:0,14,187	0/0:13,0:12:21.19:0,21,234	0/0:21,0:22:28.29:0,28,522	0/0:18,0:18:50.97:0,51,490	0/0:25,0:25:69.06:0,69,697	0/0:11,0:11:8.63:0,9,54	0/0:7,0:8:23.55:0,24,301	1/1:1,15:15:42.10:447,42,0	1/1:0,9:9:15.04:160,15,0	0/0:21,0:21:57.13:0,57,618	0/0:17,0:17:39.08:0,39,535	0/0:26,0:26:66.14:0,66,715	0/0:15,0:15:39.06:0,39,401	0/0:27,0:27:75.12:0,75,763	0/0:21,0:21:60.14:0,60,643	0/0:18,0:18:42.09:0,42,442	0/0:14,0:14:33.07:0,33,359	0/0:15,0:15:36.07:0,36,379	0/0:24,0:24:56.84:0,57,557	0/0:17,0:17:48.10:0,48,505	0/0:17,0:16:36.08:0,36,480	0/0:26,0:30:83.20:0,83,1108	0/0:17,0:17:45.09:0,45,469	0/0:26,1:27:34.15:0,34,592	0/0:25,0:25:69.12:0,69,750	0/0:8,0:8:9.02:0,9,96
chr10	65397665	.	TCA	T	18461.63	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=16.280;DP=1243;FS=4.749;HRun=0;HaplotypeScore=167.9622;InbreedingCoeff=0.9717;MQ=57.76;MQ0=15;MQRankSum=-0.108;QD=25.39;ReadPosRankSum=8.387;VQSLOD=4.6103;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,40:46:79.81:1008,80,0	1/1:1,10:11:18.01:231,18,0	0/0:56,0:34:71.92:0,72,1065	0/0:67,1:33:25.19:0,25,854	0/0:33,0:33:87.26:0,87,1393	1/1:7,25:32:57.19:733,57,0	1/1:4,27:31:68.25:886,68,0	0/0:60,0:60:91.55:0,92,1984	0/0:68,0:68:99:0,167,2642	0/0:56,0:56:99:0,151,2493	0/0:27,0:27:75.26:0,75,1260	1/1:6,59:65:99:1773,138,0	0/0:58,0:58:99:0,157,2584	1/1:3,46:47:99:1313,102,0	1/1:2,52:52:99:1351,105,0	1/1:3,46:49:99:1351,105,0	1/1:5,29:33:62.94:783,63,0	1/1:7,23:30:2.89:598,3,0	1/1:6,27:32:78.19:953,78,0	1/1:4,23:27:57.18:733,57,0	1/1:8,107:113:99:2871,226,0	1/1:5,28:32:57.18:734,57,0	0/0:31,0:31:69.20:0,69,1107	0/0:59,0:59:99:0,150,2434	1/1:4,30:34:72.23:927,72,0	1/1:3,38:41:65.08:1334,65,0	1/1:3,20:23:45.15:579,45,0	1/1:5,10:15:20.77:304,21,0
chr10	65398495	.	CA	C	230.30	PASS	AB=0.895;AC=7;AF=0.125;AN=56;BaseQRankSum=2.443;DP=647;FS=6.226;HRun=15;HaplotypeScore=91.9817;InbreedingCoeff=0.1123;MQ=67.29;MQ0=0;MQRankSum=0.828;QD=1.48;ReadPosRankSum=4.989;VQSLOD=-0.5890;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,5:26:37.52:0,38,423	0/0:11,0:12:23.76:0,24,187	0/0:20,1:17:10.09:0,10,217	0/0:16,1:12:0.97:0,1,113	0/0:23,2:26:14.97:0,15,377	0/1:21,1:30:0.74:1,0,236	0/1:16,3:19:25.70:26,0,179	1/1:13,20:34:45.99:291,46,0	0/0:6,0:22:23.25:0,23,146	0/0:13,0:32:65.03:0,65,321	0/0:10,0:29:44.42:0,44,234	0/0:26,1:28:7.13:0,7,243	0/0:10,0:10:17.92:0,18,139	0/0:18,0:26:39.70:0,40,302	0/0:20,0:20:33.42:0,33,276	0/1:17,1:19:4.46:4,0,191	0/1:21,4:26:9.93:10,0,261	0/0:12,0:12:23.96:0,24,198	0/0:18,1:21:1.53:0,2,234	0/1:24,2:28:19.42:19,0,240	0/0:16,3:19:27.41:0,27,224	0/0:20,0:23:26.66:0,27,208	0/0:15,2:17:13.69:0,14,230	0/0:23,0:23:48.38:0,48,396	0/0:23,5:28:6.45:0,6,302	0/0:18,0:18:21.73:0,22,166	0/0:28,5:36:0.74:0,1,230	0/0:20,2:24:6.01:0,6,259
chr10	65399015	.	ATT	A	8354.24	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=10.616;DP=511;FS=12.237;HRun=11;HaplotypeScore=106.1013;InbreedingCoeff=0.9615;MQ=55.86;MQ0=8;MQRankSum=0.087;QD=25.24;ReadPosRankSum=3.424;VQSLOD=3.4124;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,14:21:53.80:532,54,0	1/1:4,6:10:21.05:223,21,0	0/0:8,0:4:9.03:0,9,122	0/0:1,0:2:1.55:0,2,4	0/0:28,0:31:65.69:0,66,941	1/1:2,19:21:54.13:575,54,0	1/1:1,16:15:45.11:479,45,0	0/0:32,0:33:75.68:0,76,1062	0/0:12,0:14:36.08:0,36,477	0/0:6,0:25:48.53:0,49,189	0/0:3,0:19:37.31:0,37,128	1/1:2,13:15:35.79:383,36,0	0/0:9,0:9:27.08:0,27,395	1/1:1,9:10:27.07:287,27,0	1/1:5,19:24:60.14:638,60,0	1/1:2,22:24:63.14:671,63,0	1/1:2,22:24:63.16:669,63,0	1/1:2,12:14:33.07:351,33,0	1/1:6,13:17:39.07:415,39,0	1/1:2,15:18:32.95:407,33,0	1/1:4,22:26:48.09:511,48,0	1/1:0,16:16:45.11:479,45,0	0/0:12,0:12:33.11:0,33,508	0/0:19,0:25:57.14:0,57,746	1/1:7,9:17:38.73:376,39,0	1/1:5,15:23:26.92:453,27,0	1/1:1,18:19:54.13:575,54,0	1/1:1,11:12:16.67:332,17,0
chr10	65399115	.	T	TA	9194.24	PASS	AB=0.722;AC=39;AF=0.696;AN=56;BaseQRankSum=-3.771;DP=515;FS=0.836;HRun=10;HaplotypeScore=64.9449;InbreedingCoeff=0.5776;MQ=67.95;MQ0=1;MQRankSum=-0.242;QD=23.04;ReadPosRankSum=2.510;VQSLOD=5.6306;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:6,13:19:7.18:342,0,7	1/1:3,9:12:5.44:263,5,0	0/1:10,0:7:2.17:2,0,25	0/1:8,0:8:19.22:19,0,19	0/0:26,0:26:62.90:0,63,514	1/1:3,16:19:23.48:455,23,0	1/1:2,11:13:8.44:295,8,0	0/0:34,0:34:74.85:0,75,609	0/0:16,0:16:41.93:0,42,342	1/1:3,16:19:48.12:511,48,0	1/1:2,17:19:29.49:519,29,0	1/1:3,17:20:29.50:519,29,0	0/0:9,0:9:17.95:0,18,148	1/1:3,16:19:48.12:512,48,0	0/1:4,18:22:22.77:397,0,23	1/1:8,15:23:4.94:463,5,0	1/1:1,15:16:39.10:416,39,0	1/1:1,19:20:57.14:608,57,0	1/1:2,12:15:38.97:398,39,0	1/1:8,12:20:29.43:492,29,0	1/1:2,8:10:24.06:256,24,0	1/1:4,16:21:59.87:599,60,0	0/0:22,0:22:52.95:0,53,420	0/0:9,0:9:11.96:0,12,99	0/1:5,17:22:19.66:426,0,20	1/1:4,25:29:72.14:749,72,0	1/1:5,17:22:39.12:543,39,0	1/1:4,15:20:16.61:411,17,0
chr10	65399397	.	CTTTT	C	22428.50	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=15.345;DP=712;FS=1.415;HRun=6;HaplotypeScore=153.0449;InbreedingCoeff=0.9807;MQ=68.12;MQ0=0;MQRankSum=-9.532;QD=43.30;ReadPosRankSum=0.237;VQSLOD=2.1582;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,38:38:84.13:1469,84,0	1/1:0,9:9:24.08:449,24,0	0/0:26,0:25:61.07:0,61,1360	0/0:21,0:20:50.98:0,51,1080	0/0:29,0:29:87.29:0,87,2325	1/1:1,19:20:51.11:895,51,0	1/1:0,25:25:54.19:997,54,0	1/1:1,23:23:66.17:1088,66,0	0/0:21,0:21:63.22:0,63,1726	1/1:0,19:18:54.16:931,54,0	1/1:0,21:21:59.82:972,60,0	1/1:0,35:35:93.32:1711,93,0	0/0:28,0:28:84.26:0,84,2091	1/1:2,28:30:66.22:1212,66,0	1/1:0,31:31:75.26:1383,75,0	1/1:1,27:28:69.24:1288,69,0	1/1:0,19:19:39.13:728,39,0	1/1:0,17:17:39.08:691,39,0	1/1:1,27:28:78.12:1287,78,0	1/1:0,29:29:77.93:1245,78,0	1/1:0,25:25:51.17:893,51,0	1/1:0,26:26:72.24:1297,72,0	0/0:28,0:28:78.12:0,78,1965	0/0:41,0:41:99:0,123,3249	1/1:0,18:18:42.01:708,42,0	1/1:0,30:30:87.27:1562,87,0	1/1:2,42:44:81.28:1512,81,0	1/1:0,2:2:6.02:112,6,0
chr10	65400272	.	GT	G	3104.02	PASS	AB=0.991;AC=49;AF=0.875;AN=56;BaseQRankSum=5.893;DP=535;FS=0.584;HRun=1;HaplotypeScore=95.2590;InbreedingCoeff=0.1295;MQ=86.41;MQ0=0;MQRankSum=-3.864;QD=6.04;ReadPosRankSum=9.776;VQSLOD=-0.3037;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:41,0:40:44.56:256,45,0	1/1:9,0:9:21.46:82,21,0	0/0:21,0:21:10.42:0,10,192	0/1:20,1:21:42.59:60,0,43	1/1:8,0:8:19.14:69,19,0	1/1:18,0:18:40.02:144,40,0	1/1:37,0:37:28.09:203,28,0	0/1:22,0:22:55.55:56,0,66	0/1:16,0:16:34.86:70,0,35	1/1:16,0:16:26.83:95,27,0	1/1:10,0:10:18.29:62,18,0	1/1:27,1:28:33:188,33,0	1/1:22,0:22:51.24:203,51,0	1/1:26,0:26:36.94:218,37,0	1/1:14,0:14:6.07:78,6,0	1/1:19,1:20:21.88:139,22,0	1/1:27,0:27:62.18:222,62,0	1/1:24,0:24:53.34:189,53,0	1/1:18,0:18:11.62:76,12,0	0/1:14,0:14:16.03:63,0,16	1/1:37,0:37:10.26:163,10,0	1/1:12,1:13:6.52:121,7,0	1/1:7,0:7:11.87:47,12,0	0/1:16,0:16:7.72:67,0,8	1/1:11,0:11:13.01:56,13,0	1/1:18,0:18:34.89:122,35,0	1/1:15,0:15:35:139,35,0	1/1:6,0:6:14.57:54,15,0
chr10	65402856	.	G	GA	11831	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-12.710;DP=641;FS=8.590;HRun=9;HaplotypeScore=66.5109;InbreedingCoeff=0.9848;MQ=84.02;MQ0=0;MQRankSum=-1.975;QD=25.07;ReadPosRankSum=2.475;VQSLOD=5.4824;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,44:51:31.15:1256,31,0	1/1:0,12:12:36.10:398,36,0	0/0:19,0:20:35.23:0,35,301	0/0:23,0:22:13.83:0,14,269	0/0:18,1:19:20.73:0,21,390	1/1:0,15:15:42.11:465,42,0	1/1:3,21:24:57.11:617,57,0	0/0:20,0:20:44.94:0,45,387	0/0:23,0:23:68.99:0,69,599	1/1:8,22:30:66.14:715,66,0	1/1:3,16:19:45.12:498,45,0	1/1:0,19:19:51.14:564,51,0	0/0:17,0:17:35.97:0,36,312	1/1:4,13:17:33.09:365,33,0	1/1:4,20:24:54.15:597,54,0	1/1:5,20:25:25.70:476,26,0	1/1:3,23:26:11.06:578,11,0	1/1:3,22:26:59.17:677,59,0	1/1:5,23:28:69.11:731,69,0	1/1:4,19:23:54.06:570,54,0	1/1:7,18:26:43.94:536,44,0	1/1:2,16:18:45.12:498,45,0	0/0:19,1:20:14.80:0,15,357	0/0:27,0:27:71.97:0,72,625	1/1:2,17:19:45.12:498,45,0	1/1:3,32:35:90.24:996,90,0	1/1:8,21:28:54.03:597,54,0	1/1:0,6:6:18.05:199,18,0
chr10	65403656	.	T	TA	8757.43	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=12.246;DP=502;FS=12.828;HRun=9;HaplotypeScore=98.8424;InbreedingCoeff=0.9755;MQ=73.20;MQ0=1;MQRankSum=-1.282;QD=24.26;ReadPosRankSum=2.896;VQSLOD=4.2664;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,36:39:60.71:945,61,0	1/1:1,7:8:15.04:166,15,0	0/0:20,1:14:11.82:0,12,103	0/0:15,0:13:10.36:0,10,62	0/0:14,0:14:32.99:0,33,286	1/1:0,19:19:51.07:549,51,0	1/1:2,13:15:33.09:365,33,0	0/0:28,0:27:74.96:0,75,647	0/0:20,0:20:33.40:0,33,441	1/1:1,1:10:23.03:133,23,0	1/1:4,0:16:34.72:204,35,0	1/1:4,22:26:47.99:531,48,0	0/0:20,0:20:47.99:0,48,417	1/1:2,11:14:32.95:362,33,0	1/1:4,18:22:45.12:498,45,0	1/1:2,21:23:57.15:631,57,0	1/1:4,18:22:31.16:571,31,0	1/1:1,9:10:27.07:299,27,0	1/1:10,20:30:59.86:621,60,0	1/1:1,17:18:45.12:497,45,0	1/1:2,12:14:36.10:398,36,0	1/1:1,4:5:12.03:133,12,0	0/0:8,0:8:24:0,24,208	0/0:14,0:14:41.99:0,42,364	1/1:2,15:17:45.12:498,45,0	1/1:3,19:23:59.96:625,60,0	1/1:5,19:23:45.32:567,45,0	1/1:1,5:6:15.04:166,15,0
chr10	65403829	.	TA	T	13653.47	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=7.026;DP=498;FS=1.406;HRun=2;HaplotypeScore=53.2750;InbreedingCoeff=0.9770;MQ=59.90;MQ0=3;MQRankSum=-0.218;QD=34.65;ReadPosRankSum=1.730;VQSLOD=5.0505;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,15:16:42.14:545,42,0	1/1:1,8:9:24.08:311,24,0	0/0:18,0:14:42.14:0,42,615	0/0:17,0:11:12.19:0,12,392	0/0:32,0:32:96.31:0,96,1419	1/1:0,16:16:45.15:584,45,0	1/1:0,19:19:54.12:681,54,0	1/1:1,49:45:99:1719,135,0	0/0:9,0:9:27.09:0,27,405	1/1:1,19:20:54.18:701,54,0	1/1:0,13:13:39.09:488,39,0	1/1:1,23:24:66.21:856,66,0	0/0:15,0:15:45.15:0,45,669	1/1:1,18:19:54.11:680,54,0	1/1:0,13:13:39.13:506,39,0	1/1:1,20:21:54.18:701,54,0	1/1:0,25:25:69.22:896,69,0	1/1:1,12:13:33.11:428,33,0	1/1:5,17:21:44.86:557,45,0	1/1:2,20:22:60.16:760,60,0	1/1:0,5:5:15.05:195,15,0	1/1:1,6:7:15.05:195,15,0	0/0:10,0:10:30.10:0,30,447	0/0:3,0:3:9.03:0,9,135	1/1:4,20:24:63.04:792,63,0	1/1:1,17:17:51.17:662,51,0	1/1:0,30:30:84.27:1088,84,0	1/1:0,8:8:24.08:311,24,0
chr10	65404574	.	C	CTG	650.58	PASS	AB=0.856;AC=6;AF=0.107;AN=56;BaseQRankSum=10.356;DP=617;FS=3.818;HRun=0;HaplotypeScore=122.6179;InbreedingCoeff=-0.1319;MQ=64.87;MQ0=11;MQRankSum=-9.371;QD=5.20;ReadPosRankSum=-0.992;VQSLOD=3.0456;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:40:99:0,117,1859	0/1:6,1:7:34:34,0,272	0/0:26,0:17:45.49:0,45,597	0/0:26,0:12:23.78:0,24,305	0/0:28,0:28:63.02:0,63,1163	0/0:19,0:19:54.18:0,54,873	0/0:16,0:13:33.11:0,33,516	0/0:17,0:16:48.16:0,48,783	0/0:22,0:22:66.23:0,66,1073	0/1:29,5:34:99:219,0,1126	0/1:23,2:24:46.65:47,0,846	0/0:25,0:25:37.08:0,37,1015	0/0:14,0:14:42.14:0,42,683	0/0:18,0:18:25.55:0,26,703	0/0:28,1:28:16.14:0,16,1176	0/0:20,1:21:60.20:0,60,978	0/0:35,0:35:50.63:0,51,1271	0/0:25,0:25:53.83:0,54,940	0/0:17,0:17:51.15:0,51,796	0/1:10,5:15:99:236,0,389	0/0:16,0:16:42.62:0,43,697	0/0:14,0:13:39.13:0,39,633	0/0:22,0:22:30.51:0,31,894	0/0:20,0:20:38.91:0,39,817	0/1:14,3:18:99:138,0,583	0/0:24,1:24:0.14:0,0,863	0/1:23,3:26:99:101,0,999	0/0:15,0:15:45.15:0,45,717
chr10	65406192	.	GGCCAT	G	15988	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=12.836;DP=554;FS=3.731;HRun=0;HaplotypeScore=120.0685;InbreedingCoeff=0.9976;MQ=90.72;MQ0=0;MQRankSum=-7.258;QD=45.42;ReadPosRankSum=5.083;VQSLOD=4.5517;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,17:21:33.11:677,33,0	1/1:1,8:9:27.09:547,27,0	0/0:22,0:22:51.14:0,51,1335	0/0:31,0:31:77.75:0,78,2161	0/0:31,0:31:90.31:0,90,2736	1/1:2,20:22:57.20:1169,57,0	1/1:0,21:21:42.14:861,42,0	0/0:29,0:29:72.25:0,72,2114	0/0:25,0:25:75.26:0,75,2289	1/1:0,10:10:30.10:575,30,0	1/1:4,11:15:27.09:554,27,0	1/1:2,13:15:39.13:800,39,0	0/0:28,0:28:84.29:0,84,2520	1/1:1,9:10:24.08:492,24,0	1/1:3,26:29:75.26:1538,75,0	1/1:1,19:20:54.19:1108,54,0	1/1:0,22:22:57.20:1169,57,0	1/1:1,13:14:33.11:677,33,0	1/1:2,12:14:36.12:706,36,0	1/1:2,19:21:51.18:1045,51,0	1/1:6,16:22:33.04:595,33,0	1/1:4,17:21:32.94:676,33,0	0/0:15,0:15:39.11:0,39,1120	0/0:21,0:20:63.22:0,63,1916	1/1:2,18:20:36.12:738,36,0	1/1:3,15:18:45.15:891,45,0	1/1:5,15:20:38.97:800,39,0	1/1:2,6:8:18.06:369,18,0
chr10	65406921	.	GCA	G	551.37	PASS	AB=0.902;AC=19;AF=0.380;AN=50;BaseQRankSum=5.414;DP=532;FS=3.453;HRun=0;HaplotypeScore=77.5645;InbreedingCoeff=-0.3352;MQ=57.03;MQ0=14;MQRankSum=0.783;QD=1.54;ReadPosRankSum=0.509;VQSLOD=1.5141;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:31,3:33:84.66:116,0,85	0/0:6,0:5:3.01:0,3,42	./.	./.	0/0:5,0:5:3.01:0,3,45	1/1:12,0:12:2.99:25,3,0	0/1:20,4:24:98.19:98,0,129	0/1:17,0:17:14.96:25,0,15	0/0:9,0:18:15:0,15,131	1/1:10,0:13:2.84:14,3,0	./.	0/1:23,3:27:99:100,0,419	0/0:10,0:10:18.03:0,18,234	0/0:22,0:22:12.71:0,13,303	0/0:18,0:18:11.97:0,12,152	0/1:10,3:12:71.02:71,0,204	0/1:27,1:31:19.19:19,0,389	0/1:16,1:16:19.89:20,0,229	0/1:16,0:18:17.91:18,0,112	0/1:8,2:10:37.44:37,0,79	0/1:46,1:49:22.81:23,0,600	0/1:9,2:11:17.83:18,0,132	0/1:14,0:14:0:0,0,0	0/1:40,1:42:37.18:37,0,797	0/1:14,1:15:20.67:21,0,109	0/0:15,0:15:21.04:0,21,194	0/0:12,0:12:15.05:0,15,219	0/1:8,2:10:49.10:53,0,49
chr10	65406961	.	ACACC	A	496.91	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.664;DP=626;FS=9.059;HRun=0;HaplotypeScore=120.7935;InbreedingCoeff=0.7324;MQ=60.40;MQ0=17;MQRankSum=4.319;QD=16.56;ReadPosRankSum=-1.066;VQSLOD=2.7367;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:35:69.87:0,70,914	0/0:5,0:5:15.02:0,15,209	0/0:28,0:12:22.19:0,22,242	0/0:28,0:18:12.11:0,12,228	0/0:7,0:7:21:0,21,237	0/0:22,0:21:31.55:0,32,480	0/0:33,0:33:47.19:0,47,874	1/1:3,27:28:54.03:592,54,0	0/0:21,0:19:28.88:0,29,464	0/0:13,0:12:17.86:0,18,188	0/0:9,0:8:17.94:0,18,145	0/0:39,0:39:87.86:0,88,1606	0/0:18,0:17:47.92:0,48,683	0/0:17,0:17:18.07:0,18,787	0/0:13,0:13:35.79:0,36,548	0/0:23,0:22:60.34:0,60,821	0/0:33,0:33:39.77:0,40,1191	0/0:18,0:17:25.04:0,25,598	0/0:20,0:19:3.58:0,4,487	0/0:15,0:14:26.76:0,27,313	0/0:73,0:69:99:0,126,2019	0/0:12,0:12:29.61:0,30,501	0/0:4,0:5:5.94:0,6,51	0/0:53,0:53:99:0,122,2479	0/0:15,0:13:30:0,30,396	0/0:18,0:18:47.53:0,48,588	0/0:13,0:12:29.81:0,30,567	0/0:8,0:8:17.98:0,18,205
chr10	65407820	.	G	GA	6890.73	PASS	AB=0.684;AC=39;AF=0.696;AN=56;BaseQRankSum=3.534;DP=504;FS=1.146;HRun=8;HaplotypeScore=96.3048;InbreedingCoeff=0.8563;MQ=46.16;MQ0=23;MQRankSum=-0.125;QD=18.23;ReadPosRankSum=1.239;VQSLOD=4.5252;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:15,18:33:71.62:755,72,0	1/1:2,5:7:17.72:183,18,0	0/0:5,0:2:3.47:0,3,28	0/0:5,0:4:2.93:0,3,26	0/0:13,0:13:17.99:0,18,163	1/1:4,17:21:57.09:625,57,0	1/1:11,10:20:35.84:365,36,0	0/0:25,0:23:17.81:0,18,256	0/0:22,0:20:17.50:0,18,159	1/1:12,10:21:39.98:432,40,0	1/1:7,8:12:20.95:220,21,0	1/1:12,7:19:29.91:317,30,0	0/0:17,0:17:33.01:0,33,301	1/1:8,9:16:32.25:329,32,0	1/1:10,11:21:42.87:445,43,0	1/1:6,12:18:45.54:490,46,0	1/1:16,10:18:29.90:299,30,0	1/1:13,6:17:18.52:210,19,0	0/1:7,6:10:6.20:186,0,6	1/1:10,14:24:30:345,30,0	1/1:12,4:14:14.99:151,15,0	1/1:7,12:18:24.04:264,24,0	0/0:20,0:19:41.93:0,42,379	0/0:19,0:19:26.94:0,27,237	1/1:7,9:16:29.87:315,30,0	1/1:8,11:19:36.09:404,36,0	1/1:9,9:17:11.07:255,11,0	1/1:9,5:12:27.91:301,28,0
chr10	65407832	.	CAA	C	3474.54	PASS	AB=0.783;AC=35;AF=0.625;AN=56;BaseQRankSum=4.810;DP=540;FS=6.316;HRun=16;HaplotypeScore=110.6427;InbreedingCoeff=0.4188;MQ=52.46;MQ0=22;MQRankSum=-0.452;QD=8.31;ReadPosRankSum=2.814;VQSLOD=1.4861;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:17,13:32:33.54:381,34,0	1/1:4,6:11:20.04:186,20,0	0/0:9,0:6:11.91:0,12,109	0/0:7,0:6:8.93:0,9,68	0/0:15,0:18:38.22:0,38,394	1/1:13,10:25:30.08:309,30,0	0/1:16,4:21:16.34:122,0,16	0/0:22,0:24:46.51:0,47,413	0/0:24,0:22:49.52:0,50,505	1/1:14,8:21:15.04:220,15,0	1/1:11,4:12:11.66:90,12,0	0/1:16,4:22:38.19:95,0,38	0/1:13,1:13:10.17:10,0,85	0/1:13,4:16:45.37:86,0,45	1/1:15,5:21:21.08:184,21,0	1/1:14,4:18:22.42:210,22,0	1/1:19,11:23:6.72:108,7,0	1/1:16,4:20:7.98:136,8,0	0/1:7,10:14:6.42:218,0,6	1/1:20,4:23:19.68:246,20,0	1/1:8,7:16:3.34:97,3,0	0/1:15,3:18:5.60:109,0,6	0/0:19,0:19:35.01:0,35,302	0/0:16,0:16:26.87:0,27,290	1/1:12,5:18:3.04:189,3,0	1/1:11,4:16:22.98:159,23,0	1/1:9,13:21:13.92:192,14,0	0/1:10,4:15:9.65:127,0,10
chr10	65409227	.	G	GGGACCT	45623.53	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-7.036;DP=783;FS=4.888;HRun=0;HaplotypeScore=157.9131;InbreedingCoeff=0.9978;MQ=76.76;MQ0=0;MQRankSum=-20.244;QD=83.71;ReadPosRankSum=2.857;VQSLOD=5.9405;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,33:45:99:3539,105,0	1/1:3,7:14:20.85:747,21,0	0/0:28,0:28:72.20:0,72,1464	0/0:26,0:26:72.21:0,72,1507	0/0:21,0:21:60.21:0,60,1346	1/1:6,19:26:60.20:2120,60,0	1/1:6,31:40:99:3531,105,0	0/0:37,0:37:90.28:0,90,1914	0/0:38,0:38:99:0,111,2471	1/1:6,28:36:99:3386,102,0	1/1:4,10:16:27.09:889,27,0	1/1:12,21:34:99:3118,99,0	0/0:25,0:25:75.24:0,75,1691	1/1:9,25:35:93.32:3226,93,0	1/1:3,33:36:99:3381,99,0	1/1:5,24:33:84.29:2918,84,0	1/1:7,14:23:51.13:1715,51,0	1/1:5,12:17:45.15:1602,45,0	1/1:9,10:21:54.17:1731,54,0	1/1:2,16:24:63.13:1963,63,0	1/1:7,22:32:47.85:1618,48,0	1/1:9,18:28:66.23:2253,66,0	0/0:24,0:24:66.23:0,66,1540	0/0:39,0:39:99:0,114,2635	1/1:2,17:21:57.20:1992,57,0	1/1:9,21:31:90.29:2911,90,0	1/1:4,21:25:66.23:2344,66,0	1/1:0,6:7:18.06:640,18,0
chr10	65409935	.	T	TACACAC	5018.56	PASS	AB=1.000;AC=39;AF=0.750;AN=52;BaseQRankSum=2.059;DP=510;FS=1.445;HRun=0;HaplotypeScore=147.3495;InbreedingCoeff=0.6025;MQ=55.92;MQ0=8;MQRankSum=-4.618;QD=13.17;ReadPosRankSum=-3.337;VQSLOD=3.4710;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:30:24.08:461,24,0	1/1:6,0:11:3.01:46,3,0	./.	0/1:16,0:6:0:0,0,0	0/0:9,0:11:15.05:0,15,287	1/1:10,0:14:6.02:78,6,0	1/1:22,5:31:9.70:241,10,0	0/1:23,0:22:8.93:9,0,130	0/0:16,0:18:21.07:0,21,389	1/1:19,0:19:20.45:238,20,0	1/1:14,0:14:5.46:93,5,0	./.	0/0:11,0:11:15.04:0,15,260	1/1:7,2:16:12.03:273,12,0	1/1:13,5:20:5.90:194,6,0	1/1:9,4:16:4.67:192,5,0	1/1:14,0:18:9.74:235,10,0	1/1:20,1:21:27.08:606,27,0	0/1:9,0:9:7.82:269,0,8	1/1:9,3:15:9.03:232,9,0	1/1:15,0:16:9:118,9,0	1/1:8,4:16:6.49:161,6,0	0/0:11,0:12:21.94:0,22,393	0/0:32,0:32:40.17:0,40,1016	1/1:9,9:24:17.20:580,17,0	1/1:20,4:25:21.01:407,21,0	1/1:12,2:17:11.95:319,12,0	1/1:2,7:9:9.03:267,9,0
chr10	65410583	.	G	GTTTT	14594.10	PASS	AB=0.632;AC=39;AF=0.696;AN=56;BaseQRankSum=-1.891;DP=597;FS=0.384;HRun=9;HaplotypeScore=95.4484;InbreedingCoeff=0.8873;MQ=58.93;MQ0=4;MQRankSum=-5.389;QD=35.25;ReadPosRankSum=-0.167;VQSLOD=3.3708;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,28:37:59.01:1348,59,0	1/1:1,6:7:6.02:111,6,0	0/0:28,0:13:20.63:0,21,237	0/0:18,0:15:21.21:0,21,228	0/0:25,0:26:73.46:0,73,1034	1/1:4,17:26:54.18:1182,54,0	1/1:6,13:23:39.13:839,39,0	0/0:28,0:29:72.12:0,72,979	0/0:21,0:21:63.21:0,63,920	1/1:10,2:32:72.16:1314,72,0	1/1:7,0:21:45.15:808,45,0	1/1:4,17:23:27.09:598,27,0	0/0:23,0:22:57.15:0,57,822	1/1:1,9:11:15.05:326,15,0	1/1:6,15:24:48.16:1059,48,0	0/1:5,2:12:22.81:306,0,23	1/1:6,13:24:45.15:839,45,0	1/1:11,21:34:45.15:1042,45,0	1/1:13,9:24:45.15:856,45,0	1/1:6,13:21:48.05:839,48,0	1/1:4,11:15:13.60:292,14,0	1/1:1,7:11:27.05:477,27,0	0/0:16,0:16:42.13:0,42,614	0/0:21,0:21:60.19:0,60,878	1/1:6,9:20:36.12:760,36,0	1/1:7,16:25:57:980,57,0	1/1:5,10:17:15.05:292,15,0	1/1:0,5:6:15.05:326,15,0
chr10	65410753	.	G	GT	17985.66	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-11.647;DP=549;FS=12.667;HRun=0;HaplotypeScore=52.7996;InbreedingCoeff=0.9824;MQ=80.25;MQ0=0;MQRankSum=-5.504;QD=44.30;ReadPosRankSum=4.914;VQSLOD=3.8970;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,28:31:72.25:1151,72,0	1/1:1,11:12:33.11:528,33,0	0/0:8,0:8:24.05:0,24,315	0/0:23,0:23:41.73:0,42,644	0/0:21,0:21:63.21:0,63,881	1/1:1,23:24:69.24:1103,69,0	1/1:0,27:27:78.27:1246,78,0	0/0:22,0:22:66.21:0,66,908	0/0:18,0:18:54.17:0,54,738	1/1:1,17:18:51.17:815,51,0	1/1:0,12:12:36.12:576,36,0	1/1:0,29:29:81.28:1294,81,0	0/0:18,0:18:45.13:0,45,610	1/1:1,21:22:54.18:862,54,0	1/1:0,13:13:36.59:576,37,0	1/1:1,17:18:6.20:677,6,0	1/1:0,29:29:81.28:1294,81,0	1/1:0,20:20:60.20:959,60,0	1/1:1,18:19:54.18:863,54,0	1/1:0,13:13:36.12:575,36,0	1/1:0,36:36:99:1631,102,0	1/1:0,14:14:42.14:671,42,0	0/0:10,0:10:24.07:0,24,320	0/0:23,0:23:66.19:0,66,887	1/1:0,20:20:57.19:911,57,0	1/1:0,19:19:57.19:911,57,0	1/1:0,16:16:45.15:719,45,0	1/1:0,14:14:39.13:623,39,0
chr10	65411254	.	G	GCGGT	25956.73	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-12.503;DP=637;FS=2.551;HRun=0;HaplotypeScore=101.4553;InbreedingCoeff=0.9776;MQ=79.27;MQ0=0;MQRankSum=-5.092;QD=56.31;ReadPosRankSum=3.354;VQSLOD=6.5414;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,26:31:72.25:1841,72,0	1/1:2,2:5:9.03:181,9,0	0/0:15,0:15:36.12:0,36,651	0/0:19,0:19:43.36:0,43,780	0/0:12,0:12:33.10:0,33,571	1/1:3,12:16:33.11:821,33,0	1/1:4,29:34:81.28:2117,81,0	0/0:28,0:28:72.21:0,72,1218	0/0:28,0:28:75.24:0,75,1333	1/1:3,16:21:57.18:1382,57,0	1/1:3,8:11:21.07:545,21,0	1/1:5,29:35:72.25:1877,72,0	0/0:21,0:21:57.17:0,57,1004	1/1:3,16:20:48.16:1217,48,0	1/1:12,12:24:42.14:1011,42,0	1/1:5,23:28:72.25:1844,72,0	1/1:6,30:36:93.32:2425,93,0	1/1:12,25:37:63.22:1609,63,0	1/1:9,14:24:51.17:1220,51,0	1/1:1,8:9:21.07:549,21,0	1/1:17,34:52:96.33:2511,96,0	1/1:2,9:11:18.06:470,18,0	0/0:10,0:10:24.08:0,24,436	0/0:43,0:43:99:0,111,1957	1/1:5,11:16:39.13:966,39,0	1/1:4,18:23:57.20:1489,57,0	1/1:0,23:23:63.69:1647,64,0	1/1:2,3:5:9.03:235,9,0
chr10	65411388	.	AGACG	A	15039.35	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=13.609;DP=656;FS=1.147;HRun=0;HaplotypeScore=121.4073;InbreedingCoeff=0.9883;MQ=71.31;MQ0=2;MQRankSum=-2.763;QD=32.69;ReadPosRankSum=3.488;VQSLOD=5.0194;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,46:49:99:1929,111,0	1/1:1,5:6:12.04:208,12,0	0/0:15,0:14:20.22:0,20,353	0/0:19,0:17:25.26:0,25,623	0/0:29,0:29:75.07:0,75,1571	1/1:2,20:22:48.16:834,48,0	1/1:5,21:26:39:596,39,0	0/0:31,0:31:66.11:0,66,1291	0/0:26,0:26:69.16:0,69,1529	1/1:4,12:16:36.11:594,36,0	1/1:6,16:22:39.13:677,39,0	1/1:5,22:27:45.15:782,45,0	0/0:25,0:25:60.21:0,60,1447	1/1:2,19:21:39.13:677,39,0	1/1:1,32:33:63.22:1095,63,0	1/1:4,22:26:57.20:991,57,0	1/1:6,27:33:60.21:1043,60,0	1/1:6,19:25:51.17:886,51,0	1/1:5,17:22:51.03:609,51,0	1/1:1,15:16:39.09:633,39,0	1/1:8,27:35:37.33:785,37,0	1/1:2,16:18:27.09:469,27,0	0/0:18,0:18:51.13:0,51,1236	0/0:32,0:32:93.01:0,93,2021	1/1:0,19:19:36.12:625,36,0	1/1:5,19:24:54.11:875,54,0	1/1:2,14:16:30.10:521,30,0	1/1:0,4:4:12.04:209,12,0
chr10	65416118	.	AGGATATAACCCT	A	32519.98	PASS	AB=0.607;AC=35;AF=0.625;AN=56;BaseQRankSum=18.673;DP=671;FS=10.524;HRun=0;HaplotypeScore=283.4599;InbreedingCoeff=0.9208;MQ=74.87;MQ0=0;MQRankSum=-19.606;QD=80.69;ReadPosRankSum=4.498;VQSLOD=3.4287;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,23:30:63.22:2228,63,0	1/1:1,8:9:18.06:684,18,0	0/0:21,0:21:57.15:0,57,2566	0/0:17,0:18:54.18:0,54,2295	0/0:33,0:33:99:0,99,5762	1/1:1,24:25:60.21:2258,60,0	1/1:7,18:25:54.19:1969,54,0	0/0:36,0:36:99:0,105,5802	0/0:27,0:27:66.23:0,66,3981	0/0:30,0:30:87.30:0,87,5209	0/0:23,0:23:66.20:0,66,3591	1/1:4,28:32:78.27:2909,78,0	0/0:27,0:27:78.27:0,78,4585	1/1:4,34:38:99:3698,99,0	1/1:4,22:26:69.24:2575,69,0	1/1:2,25:27:66.23:2508,66,0	1/1:5,14:19:21.07:791,21,0	1/1:4,12:16:33.11:1254,33,0	1/1:3,10:13:30.09:1052,30,0	1/1:4,16:20:39.09:1353,39,0	1/1:9,18:27:40.63:1322,41,0	1/1:7,21:28:57.20:1959,57,0	0/0:25,0:25:72.25:0,72,4423	0/0:28,0:28:78.27:0,78,4404	1/1:3,15:18:42.14:1499,42,0	0/1:6,11:17:99:1218,0,150	1/1:1,23:24:69.24:2557,69,0	1/1:0,9:9:18.06:684,18,0
chr10	65416603	.	G	GGACGACGACGAC	10887.88	PASS	AB=0.679;AC=37;AF=0.685;AN=54;BaseQRankSum=-2.433;DP=566;FS=2.807;HRun=0;HaplotypeScore=192.5477;InbreedingCoeff=0.7460;MQ=75.66;MQ0=1;MQRankSum=-7.677;QD=27.70;ReadPosRankSum=-3.067;VQSLOD=3.7359;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:24,8:35:9.03:435,9,0	1/1:5,4:8:9.03:507,9,0	0/0:27,0:22:9.03:0,9,258	0/0:34,0:32:6.50:0,6,249	0/0:23,0:23:24.08:0,24,830	1/1:11,5:16:15.05:874,15,0	1/1:35,0:35:27.02:671,27,0	1/1:22,0:22:12.49:268,12,0	0/0:18,0:18:33.08:0,33,986	0/1:10,0:19:44.28:44,0,138	0/0:4,0:10:17.77:0,18,138	1/1:11,5:18:9.03:240,9,0	0/0:18,0:18:27.07:0,27,794	1/1:11,6:17:24.08:1251,24,0	1/1:14,8:24:6.17:1038,6,0	1/1:15,0:15:14.96:220,15,0	1/1:23,10:34:27.09:1572,27,0	1/1:14,8:24:24.08:1250,24,0	1/1:19,6:27:37.47:693,37,0	1/1:12,3:18:3.01:175,3,0	1/1:29,0:29:5.56:62,6,0	./.	0/0:14,0:14:15.05:0,15,519	0/0:21,0:21:36.12:0,36,1137	1/1:5,8:13:6.02:350,6,0	1/1:12,4:16:18.05:584,18,0	1/1:10,9:19:9.03:379,9,0	1/1:3,0:3:6.02:275,6,0
chr10	65417090	.	TTACTAC	T	3163.30	PASS	AB=0.829;AC=30;AF=0.652;AN=46;BaseQRankSum=4.630;DP=586;FS=19.558;HRun=0;HaplotypeScore=115.5961;InbreedingCoeff=0.7614;MQ=61.17;MQ0=3;MQRankSum=-7.610;QD=9.95;ReadPosRankSum=3.002;VQSLOD=0.5197;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:23,5:28:15.05:224,15,0	1/1:7,7:11:12.04:193,12,0	./.	./.	0/0:13,0:13:12.04:0,12,358	0/1:13,1:26:39.43:39,0,111	0/0:24,0:34:5.95:0,6,62	./.	0/0:16,0:29:26.53:0,27,246	1/1:21,8:26:18.06:314,18,0	./.	1/1:12,6:19:12.04:222,12,0	0/0:23,0:23:39.13:0,39,1124	1/1:11,10:19:24.08:439,24,0	0/0:29,0:29:45.14:0,45,1367	1/1:9,15:24:24.08:439,24,0	1/1:15,2:16:15.04:265,15,0	./.	1/1:10,3:11:6.02:120,6,0	1/1:13,6:19:12.04:173,12,0	0/1:18,0:17:0:0,0,0	1/1:4,3:7:9.03:120,9,0	0/0:23,0:24:39.07:0,39,1103	0/0:34,0:34:50.91:0,51,1568	1/1:19,8:26:9.03:140,9,0	1/1:11,6:14:9.03:170,9,0	1/1:5,9:12:15.05:301,15,0	1/1:13,9:20:9.03:181,9,0
chr10	65417246	.	GCTA	G	8677.02	PASS	AB=0.587;AC=38;AF=0.679;AN=56;BaseQRankSum=9.614;DP=741;FS=0.000;HRun=0;HaplotypeScore=89.1667;InbreedingCoeff=0.7787;MQ=49.93;MQ0=15;MQRankSum=-1.916;QD=16.46;ReadPosRankSum=5.523;VQSLOD=4.2958;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:13,18:28:15.05:214,15,0	1/1:6,5:10:27.03:328,27,0	0/0:22,0:9:12.04:0,12,296	0/0:21,0:7:15:0,15,181	0/0:14,0:14:21.04:0,21,320	1/1:11,24:32:33.11:464,33,0	0/1:11,23:31:16.32:237,0,16	0/0:32,0:28:11.22:0,11,685	0/0:44,2:45:68.29:0,68,1693	1/1:23,9:32:69:786,69,0	1/1:2,5:7:3.01:33,3,0	1/1:4,29:34:33.11:464,33,0	0/0:38,0:38:96.03:0,96,1564	1/1:7,16:22:33.11:471,33,0	1/1:9,33:41:66.22:937,66,0	1/1:6,35:41:48.13:679,48,0	1/1:6,25:31:42.70:793,43,0	1/1:7,8:14:33.09:451,33,0	1/1:3,8:9:20.98:222,21,0	1/1:21,9:28:44.42:548,44,0	1/1:10,26:32:20.68:300,21,0	1/1:4,12:15:6:86,6,0	0/0:16,0:14:29.99:0,30,411	0/0:25,0:25:54.02:0,54,987	0/1:8,22:29:29.42:212,0,29	1/1:19,5:22:50.97:553,51,0	1/1:6,13:18:24.08:338,24,0	1/1:4,19:23:39.13:558,39,0
chr10	65417265	.	CTA	C	419.94	PASS	AB=0.989;AC=21;AF=0.375;AN=56;BaseQRankSum=14.603;DP=724;FS=4.461;HRun=0;HaplotypeScore=110.8028;InbreedingCoeff=-0.0263;MQ=49.88;MQ0=41;MQRankSum=-2.145;QD=0.92;ReadPosRankSum=10.143;VQSLOD=0.0904;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:19:9.97:29,10,0	0/1:12,0:11:10.71:11,0,17	0/0:25,0:9:27.08:0,27,480	0/0:18,0:6:15.05:0,15,290	0/0:12,0:12:21.54:0,22,421	1/1:26,0:25:19.22:56,19,0	0/1:31,0:28:16.31:16,0,68	0/0:37,0:26:74.83:0,75,1267	0/0:44,0:43:99:0,105,2117	0/1:27,0:26:58.78:59,0,125	0/0:8,0:8:5.04:0,5,42	0/1:35,0:33:30.46:30,0,49	0/0:41,0:41:99:0,117,2129	0/1:28,2:26:37.98:38,0,46	0/1:42,1:41:66.69:67,0,94	0/1:41,0:40:46.35:46,0,74	1/1:30,0:28:31.39:97,31,0	0/1:21,0:16:21.80:22,0,126	0/0:10,0:9:7.46:0,7,109	0/1:27,0:24:26.55:27,0,60	0/1:32,0:31:19.95:20,0,55	1/1:16,0:15:3.91:11,4,0	0/0:18,0:17:39.60:0,40,703	0/0:28,0:27:68.98:0,69,1276	0/1:25,0:24:2.12:2,0,90	0/0:26,0:23:10.40:0,10,249	0/1:16,1:16:17.91:24,0,18	0/1:24,0:23:39.41:39,0,61
chr10	65417370	.	CTAA	C	8141.65	PASS	AB=0.643;AC=33;AF=0.589;AN=56;BaseQRankSum=5.801;DP=766;FS=2.115;HRun=0;HaplotypeScore=117.5506;InbreedingCoeff=0.4914;MQ=49.94;MQ0=36;MQRankSum=1.039;QD=15.57;ReadPosRankSum=2.664;VQSLOD=4.7655;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:17:4.21:59,4,0	0/1:5,12:18:54.53:242,0,55	0/0:31,0:7:20.95:0,21,240	0/0:31,0:8:20.38:0,20,200	0/0:17,0:17:51.08:0,51,1051	0/1:11,22:29:5.81:108,0,6	0/1:7,22:27:23.06:107,0,23	0/0:44,0:39:99:0,114,1594	0/0:42,0:42:99:0,120,2256	1/1:8,32:39:24.34:1054,24,0	1/1:6,2:16:5.98:47,6,0	1/1:5,35:39:8.65:304,9,0	0/0:36,0:36:99:0,108,2058	0/1:5,16:20:0.34:194,0,0	1/1:5,33:35:23.01:564,23,0	0/1:3,32:34:33.61:521,0,34	1/1:25,9:33:32.26:957,32,0	1/1:24,4:26:52.56:848,53,0	1/1:2,6:6:18.03:256,18,0	0/1:20,2:20:9.96:369,0,10	1/1:9,25:29:35.64:518,36,0	1/1:1,14:14:1.54:115,2,0	0/0:14,0:14:42.09:0,42,800	0/0:28,0:27:72.19:0,72,1405	1/1:21,3:24:39.27:556,39,0	1/1:9,21:26:48.06:708,48,0	1/1:2,13:13:15.05:245,15,0	0/1:12,6:16:1.47:369,0,1
chr10	65417371	.	TA	T	1374.40	PASS	AB=0.933;AC=25;AF=0.446;AN=56;BaseQRankSum=12.750;DP=762;FS=7.556;HRun=2;HaplotypeScore=122.5815;InbreedingCoeff=0.1992;MQ=49.86;MQ0=36;MQRankSum=0.352;QD=2.86;ReadPosRankSum=6.215;VQSLOD=-0.2136;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:17:17.36:0,17,142	0/1:17,1:18:11.76:83,0,12	0/0:30,2:7:21.07:0,21,296	0/0:31,0:8:17.97:0,18,205	0/0:17,0:17:51.13:0,51,738	0/1:30,3:28:35.38:51,0,35	1/1:26,4:27:10.11:81,10,0	0/0:45,0:40:99:0,120,1712	0/0:42,0:42:99:0,120,1701	0/1:36,5:38:30.99:224,0,31	0/0:17,0:17:5.86:0,6,39	1/1:39,1:38:15.96:76,16,0	0/0:36,0:36:99:0,105,1559	1/1:19,2:20:14.90:94,15,0	1/1:37,0:34:23.76:72,24,0	0/1:35,0:34:23.02:43,0,23	0/1:28,5:32:4.56:150,0,5	1/1:25,4:26:7.73:145,8,0	0/1:8,0:6:10.91:11,0,26	0/1:17,5:20:11.96:141,0,12	1/1:28,6:29:29.01:163,29,0	0/1:15,0:14:2.13:2,0,5	0/0:14,0:14:39.13:0,39,576	0/0:29,0:28:75.03:0,75,1021	0/1:21,2:23:46.61:47,0,70	0/1:25,3:24:97.45:124,0,97	1/1:15,0:13:0.54:16,1,0	0/1:18,0:16:18.17:37,0,18
chr10	65417478	.	GCTA	G	7089.55	PASS	AB=0.894;AC=42;AF=0.750;AN=56;BaseQRankSum=2.454;DP=685;FS=6.878;HRun=0;HaplotypeScore=96.7046;InbreedingCoeff=0.6029;MQ=50.74;MQ0=20;MQRankSum=-2.191;QD=13.13;ReadPosRankSum=0.032;VQSLOD=3.6711;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:18,2:14:9.02:107,9,0	1/1:15,5:16:33.06:387,33,0	0/0:21,0:7:5.18:0,5,79	0/1:18,0:3:0.88:1,0,13	0/1:17,0:17:4.77:5,0,332	1/1:26,2:26:44.92:440,45,0	1/1:19,2:20:33.07:402,33,0	0/0:13,0:31:2.68:0,3,18	0/1:37,1:38:80.33:80,0,799	1/1:34,3:35:66.03:660,66,0	1/1:6,2:8:17.98:202,18,0	1/1:28,5:28:47.28:487,47,0	0/0:36,0:36:75.17:0,75,1233	1/1:21,4:24:42.06:474,42,0	1/1:9,26:33:39.13:516,39,0	0/1:15,28:42:20.27:425,0,20	1/1:18,4:17:27.01:321,27,0	1/1:8,6:13:27.08:356,27,0	1/1:10,2:8:11.94:136,12,0	1/1:17,2:19:27:270,27,0	1/1:34,6:32:38.82:501,39,0	1/1:16,1:17:26.97:269,27,0	0/0:22,0:20:33.07:0,33,548	0/0:28,1:28:18.79:0,19,918	1/1:11,17:26:18.06:248,18,0	1/1:23,5:25:45.08:514,45,0	1/1:3,3:5:12.04:164,12,0	1/1:3,7:9:9.03:124,9,0
chr10	65417544	.	ACTACTACTACCACCACCT	A	3699.83	PASS	AB=0.984;AC=20;AF=0.385;AN=52;BaseQRankSum=9.498;DP=835;FS=11.052;HRun=0;HaplotypeScore=312.6335;InbreedingCoeff=-0.4950;MQ=40.86;MQ0=96;MQRankSum=-9.134;QD=6.21;ReadPosRankSum=-8.287;VQSLOD=-0.5122;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:19:75.34:75,0,484	0/0:20,0:19:18.79:0,19,520	./.	./.	0/0:17,0:17:36.12:0,36,2019	0/1:33,0:26:99:161,0,906	0/1:25,0:16:35.82:36,0,922	0/0:30,0:18:36.06:0,36,964	0/0:38,0:37:87.25:0,87,4027	0/1:55,0:45:99:523,0,2686	0/1:14,0:14:41.63:42,0,418	0/1:49,0:39:99:219,0,1398	0/0:35,0:33:87.30:0,87,4639	0/1:36,0:32:30.97:31,0,1062	0/1:52,0:41:99:509,0,966	0/1:34,0:28:99:422,0,342	0/1:25,0:24:90.82:91,0,591	0/1:18,0:15:86.39:86,0,857	0/1:22,0:14:97.85:98,0,738	0/1:47,0:47:99:186,0,988	0/1:29,0:27:31.93:32,0,807	0/1:29,0:23:40.49:40,0,862	0/0:19,0:18:35.33:0,35,2019	0/0:29,0:26:48.16:0,48,2792	0/1:32,0:30:99:118,0,773	0/1:28,19:34:99:768,0,1230	0/1:15,0:13:99:225,0,530	1/1:6,0:6:3.90:37,4,0
chr10	65417553	.	ACCACCACCT	A	3717.11	PASS	AB=0.950;AC=20;AF=0.385;AN=52;BaseQRankSum=11.814;DP=848;FS=13.385;HRun=0;HaplotypeScore=229.6405;InbreedingCoeff=-0.5617;MQ=40.90;MQ0=92;MQRankSum=-7.662;QD=6.06;ReadPosRankSum=-6.646;VQSLOD=-0.6499;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:17:12.13:12,0,412	0/1:12,6:17:47.95:48,0,456	./.	./.	0/0:17,0:17:36.12:0,36,1426	0/1:33,0:26:99:289,0,859	0/1:23,0:14:41.86:42,0,637	0/0:31,0:22:60.19:0,60,1581	0/0:44,0:43:99:0,102,3438	0/1:56,0:45:99:591,0,2405	0/1:17,0:16:92.58:93,0,326	0/1:36,13:39:99:160,0,1110	0/0:34,0:32:90.31:0,90,3455	0/1:27,12:35:11.99:12,0,961	0/1:54,0:43:99:549,0,719	0/1:32,0:26:99:234,0,317	0/1:25,0:24:99:151,0,514	0/1:19,0:16:78.07:78,0,651	0/1:22,0:13:99:191,0,708	0/1:29,18:47:99:128,0,878	0/1:28,0:27:11.99:12,0,576	0/1:27,0:22:27.07:27,0,667	0/0:17,0:15:35.33:0,35,1364	0/0:30,0:27:60.21:0,60,2504	0/1:31,0:29:99:217,0,613	0/1:46,1:35:99:609,0,1218	0/1:14,0:12:99:206,0,446	0/1:6,0:6:0.15:67,0,0
chr10	65417556	.	ACCACCT	A	2378.56	PASS	AB=0.975;AC=20;AF=0.385;AN=52;BaseQRankSum=11.908;DP=839;FS=14.939;HRun=0;HaplotypeScore=205.8940;InbreedingCoeff=-0.4697;MQ=40.77;MQ0=89;MQRankSum=-6.261;QD=4.12;ReadPosRankSum=-5.184;VQSLOD=0.1245;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:17:6.02:0,6,303	0/1:17,0:16:29.76:30,0,298	./.	./.	0/0:17,0:17:39.11:0,39,1069	0/1:31,0:24:99:191,0,621	0/1:24,2:17:59.08:59,0,439	0/0:32,0:22:62.88:0,63,1165	0/0:44,0:43:99:0,100,2521	0/1:55,1:45:99:414,0,1746	0/1:16,0:15:71.19:71,0,245	0/1:48,0:38:82.04:82,0,771	0/0:34,0:32:93.22:0,93,2543	0/1:37,0:33:0.01:0,0,642	0/1:51,1:41:99:345,0,473	0/1:31,1:26:99:152,0,282	0/1:24,2:25:94.75:95,0,376	0/1:19,0:16:56.19:56,0,449	0/1:21,0:12:99:126,0,526	0/1:45,0:45:77.64:78,0,624	0/1:26,0:25:27.98:28,0,393	0/1:28,0:24:22.17:22,0,464	0/0:18,0:17:36.12:0,36,997	0/0:29,0:26:63.22:0,63,1870	0/1:29,3:30:99:173,0,456	0/1:45,0:34:99:411,0,911	0/1:12,2:12:99:134,0,299	1/1:5,1:6:5.69:64,6,0
chr10	65417559	.	ACCT	A	1348	PASS	AB=0.938;AC=19;AF=0.365;AN=52;BaseQRankSum=12.389;DP=831;FS=27.518;HRun=0;HaplotypeScore=183.4583;InbreedingCoeff=-0.4484;MQ=40.68;MQ0=87;MQRankSum=-5.924;QD=2.53;ReadPosRankSum=-4.486;VQSLOD=0.0476;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,7:17:2.76:0,3,152	0/1:15,1:15:20.69:21,0,141	./.	./.	0/0:18,0:18:39.10:0,39,715	0/1:26,4:23:99:106,0,434	0/1:25,2:18:22.53:23,0,272	0/0:33,0:23:60.38:0,60,836	0/0:42,0:41:90.30:0,90,1523	0/1:52,2:43:99:213,0,1072	0/1:14,1:14:42.40:42,0,154	0/1:45,3:38:27.49:27,0,444	0/0:34,0:32:87.26:0,87,1624	0/0:37,0:33:13.97:0,14,371	0/1:49,0:38:99:188,0,299	0/1:30,1:25:85.77:86,0,175	0/1:22,4:25:87.93:88,0,229	0/1:18,1:16:80.77:81,0,246	0/1:16,5:12:91.74:92,0,340	0/1:42,0:42:18:18,0,388	0/1:25,2:26:26.22:26,0,226	0/1:26,3:24:13.17:13,0,240	0/0:18,0:17:36.02:0,36,690	0/0:31,0:28:68.86:0,69,1213	0/1:30,2:30:81.62:82,0,282	0/1:44,1:35:99:217,0,590	0/1:15,0:13:99:108,0,157	1/1:4,2:6:6.02:73,6,0
chr10	65417562	.	T	TCTA	5066.58	PASS	AB=0.948;AC=37;AF=0.685;AN=54;BaseQRankSum=6.383;DP=855;FS=7.940;HRun=0;HaplotypeScore=183.3739;InbreedingCoeff=0.3036;MQ=40.74;MQ0=80;MQRankSum=-5.716;QD=7.25;ReadPosRankSum=-4.284;VQSLOD=2.2761;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:19:6.02:105,6,0	1/1:16,0:15:1.38:4,1,0	0/0:25,0:1:3.01:0,3,37	./.	0/0:18,0:18:24.08:0,24,315	1/1:31,0:24:21.07:342,21,0	1/1:32,0:23:22.93:369,23,0	0/0:23,0:22:7.97:0,8,29	0/1:29,13:42:48.67:429,0,49	0/1:55,0:45:22.03:358,0,22	1/1:15,0:14:5.39:95,5,0	1/1:49,0:39:8.99:158,9,0	0/1:33,1:32:3.27:3,0,584	1/1:37,0:33:9.03:152,9,0	0/1:49,0:41:34.29:531,0,34	0/1:33,0:27:14.48:269,0,14	1/1:25,0:24:12.04:197,12,0	0/1:21,0:18:50.57:184,0,51	1/1:21,0:12:13.08:150,13,0	1/1:40,0:41:8.90:155,9,0	1/1:27,0:27:8.82:143,9,0	1/1:30,0:25:8.76:151,9,0	0/0:19,0:18:21.05:0,21,257	0/0:29,0:29:51.13:0,51,651	0/1:35,0:33:3.68:178,0,4	1/1:47,0:38:42.12:605,42,0	1/1:15,0:15:26.96:415,27,0	1/1:6,0:6:5.99:75,6,0
chr10	65419082	.	GTTTTA	G	10206.78	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=9.242;DP=411;FS=166.280;HRun=0;HaplotypeScore=101.4322;InbreedingCoeff=0.9246;MQ=75.42;MQ0=1;MQRankSum=-11.843;QD=37.39;ReadPosRankSum=4.127;VQSLOD=1.6680;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,12:15:1.94:457,2,0	1/1:1,11:12:15.05:293,15,0	0/0:14,0:13:30.28:0,30,572	0/0:18,0:16:35.36:0,35,633	0/0:25,0:25:56.83:0,57,1662	1/1:0,13:13:27.09:538,27,0	1/1:2,5:7:18.06:361,18,0	0/0:41,0:40:81.13:0,81,2233	0/0:12,0:12:27.09:0,27,768	1/1:1,12:13:30.10:598,30,0	1/1:0,6:6:17.98:300,18,0	1/1:2,11:13:24.08:473,24,0	0/0:8,0:8:21.07:0,21,613	1/1:2,11:13:24.08:478,24,0	1/1:7,15:22:42.14:831,42,0	1/1:2,8:10:15.05:299,15,0	1/1:2,10:12:21.07:419,21,0	1/1:2,8:10:15.05:299,15,0	1/1:2,12:14:36.04:601,36,0	1/1:2,16:18:39.13:770,39,0	1/1:1,6:7:2.92:17,3,0	1/1:3,12:15:36.04:658,36,0	0/0:11,0:11:24.04:0,24,519	0/0:8,0:8:21.07:0,21,630	1/1:2,14:16:30.10:598,30,0	1/1:4,16:20:42.06:741,42,0	1/1:6,17:23:39.13:772,39,0	1/1:1,13:14:36.12:704,36,0
chr10	65419434	.	AG	A	546.91	PASS	AB=0.913;AC=21;AF=0.875;AN=24;BaseQRankSum=-2.426;DP=54;FS=2.671;HRun=3;HaplotypeScore=20.0802;InbreedingCoeff=0.1555;MQ=80.96;MQ0=2;MQRankSum=-1.405;QD=12.72;ReadPosRankSum=2.767;VQSLOD=2.2478;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,2:2:3.01:37,3,0	./.	0/0:10,0:4:8.96:0,9,90	0/1:19,2:5:10.43:10,0,30	./.	./.	1/1:0,1:1:3.01:37,3,0	1/1:2,4:6:12.04:149,12,0	./.	1/1:0,2:2:6.02:72,6,0	./.	./.	./.	./.	./.	1/1:0,1:1:3.01:37,3,0	1/1:0,3:3:9.03:111,9,0	1/1:0,1:1:3.01:37,3,0	./.	./.	1/1:0,1:1:3.01:37,3,0	./.	./.	1/1:0,4:4:6.02:74,6,0	./.	./.	./.	1/1:0,1:1:3.01:37,3,0
chr10	65419477	.	AC	A	935.84	PASS	AB=1.000;AC=43;AF=0.935;AN=46;BaseQRankSum=-2.451;DP=70;FS=12.788;HRun=6;HaplotypeScore=18.8947;InbreedingCoeff=0.1035;MQ=94.32;MQ0=2;MQRankSum=-2.820;QD=16.71;ReadPosRankSum=-0.870;VQSLOD=1.3285;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,8:9:18.04:188,18,0	1/1:0,1:1:3.01:32,3,0	0/1:9,0:3:0.66:1,0,34	0/0:14,0:7:3.47:0,3,28	1/1:0,1:1:3.01:31,3,0	./.	1/1:0,5:5:9.02:94,9,0	1/1:0,3:3:9.02:96,9,0	./.	1/1:4,0:4:8.22:61,8,0	1/1:0,2:2:3.01:32,3,0	1/1:0,2:2:6.02:63,6,0	1/1:0,1:1:3.01:32,3,0	1/1:1,0:1:3.01:32,3,0	1/1:1,1:2:3.01:31,3,0	1/1:0,1:1:2.99:23,3,0	1/1:0,3:3:9.02:95,9,0	1/1:0,1:1:3.01:31,3,0	1/1:1,0:1:2.98:22,3,0	./.	1/1:1,2:3:3.01:32,3,0	1/1:0,1:1:3.01:32,3,0	1/1:0,1:1:3.01:31,3,0	./.	1/1:0,1:1:3.01:32,3,0	1/1:1,0:1:2.22:7,2,0	1/1:0,3:3:3.01:32,3,0	./.
chr10	65420053	.	GCGTGCGTGCGTA	G	3043.27	PASS	AB=1.000;AC=36;AF=0.667;AN=54;BaseQRankSum=3.713;DP=296;FS=13.639;HRun=0;HaplotypeScore=81.1005;InbreedingCoeff=0.6159;MQ=64.34;MQ0=12;MQRankSum=-2.553;QD=15.14;ReadPosRankSum=1.539;VQSLOD=0.8755;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:17:14.96:161,15,0	1/1:4,0:4:11.98:97,12,0	0/0:11,0:9:27.04:0,27,280	0/0:16,0:13:33.06:0,33,344	0/0:5,0:5:14.94:0,15,117	1/1:0,6:6:3.01:116,3,0	1/1:1,17:17:3.01:95,3,0	0/0:12,0:11:32.93:0,33,274	0/0:6,0:4:8.98:0,9,361	0/1:5,0:5:43.96:44,0,56	1/1:4,0:4:8.77:50,9,0	0/1:8,0:8:26.96:27,0,182	0/0:7,0:7:14.97:0,15,512	1/1:0,12:12:11.70:463,12,0	1/1:0,7:7:6.02:231,6,0	1/1:0,12:12:2.61:115,3,0	1/1:1,23:23:3.48:117,3,0	1/1:22,0:21:62.65:577,63,0	1/1:9,0:7:14.66:129,15,0	./.	1/1:19,0:15:26.94:239,27,0	1/1:3,0:3:8.99:75,9,0	0/0:5,0:5:14.98:0,15,124	0/0:33,0:32:89.99:0,90,2457	1/1:1,7:8:3.01:117,3,0	1/1:0,10:10:29.85:371,30,0	1/1:5,0:5:11.98:98,12,0	1/1:0,7:7:3.01:113,3,0
chr10	65420057	.	GCGTGCGTA	G	2393.79	PASS	AB=1.000;AC=37;AF=0.685;AN=54;BaseQRankSum=4.290;DP=305;FS=14.689;HRun=0;HaplotypeScore=71.8454;InbreedingCoeff=0.6883;MQ=68.75;MQ0=9;MQRankSum=-1.798;QD=11.68;ReadPosRankSum=2.070;VQSLOD=0.6826;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:22:20.91:163,21,0	1/1:4,0:4:11.98:97,12,0	0/0:14,0:12:36.05:0,36,364	0/0:16,0:13:33.06:0,33,344	0/0:7,0:7:20.96:0,21,171	1/1:6,0:6:3.01:69,3,0	1/1:18,0:17:3.01:49,3,0	0/0:13,0:12:35.93:0,36,300	0/0:5,0:5:11.97:0,12,298	1/1:4,0:4:9.01:83,9,0	1/1:0,4:4:8.84:120,9,0	0/1:8,0:8:26.99:27,0,90	0/0:7,0:7:14.95:0,15,343	1/1:12,0:12:11.87:278,12,0	1/1:7,0:7:6.02:139,6,0	1/1:12,0:12:2.90:69,3,0	1/1:24,0:23:3.48:70,3,0	1/1:22,0:21:61.40:446,61,0	1/1:10,0:8:15.62:135,16,0	./.	1/1:18,0:15:29.85:239,30,0	1/1:2,0:2:5.99:50,6,0	0/0:6,0:6:17.98:0,18,149	0/0:32,0:31:86.97:0,87,1753	1/1:8,0:8:3.01:70,3,0	1/1:10,0:10:29.84:279,30,0	1/1:6,0:6:17.88:135,18,0	1/1:7,0:7:3.01:67,3,0
chr10	65420204	.	G	GA	4680.55	PASS	AB=0.838;AC=38;AF=0.704;AN=54;BaseQRankSum=7.738;DP=448;FS=4.863;HRun=9;HaplotypeScore=84.0886;InbreedingCoeff=0.7835;MQ=35.79;MQ0=37;MQRankSum=-8.533;QD=14.91;ReadPosRankSum=-0.306;VQSLOD=5.0051;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:15,24:35:63.01:643,63,0	1/1:1,5:5:12.03:133,12,0	0/1:14,0:3:0:0,0,0	0/0:15,0:3:5.99:0,6,51	0/0:26,0:24:56.98:0,57,494	1/1:3,10:12:21.06:232,21,0	1/1:6,14:18:30.14:360,30,0	0/0:28,0:26:50.96:0,51,442	0/0:10,0:9:17.98:0,18,156	1/1:2,5:6:12.03:133,12,0	1/1:2,4:5:9.02:99,9,0	1/1:6,8:11:23.98:238,24,0	0/0:16,0:15:32.99:0,33,286	1/1:7,8:14:29.95:290,30,0	1/1:5,14:17:41.99:420,42,0	1/1:10,4:12:12:119,12,0	1/1:10,12:19:31.12:338,31,0	0/1:13,12:24:10.04:342,0,10	1/1:7,16:19:23.27:452,23,0	1/1:6,2:7:6.02:66,6,0	1/1:3,3:5:3.01:33,3,0	1/1:7,6:9:12.03:133,12,0	0/0:7,0:7:12.46:0,12,105	0/0:29,0:26:62.96:0,63,541	1/1:4,5:7:12.03:133,12,0	1/1:11,6:15:18.01:186,18,0	1/1:12,11:21:30.08:331,30,0	./.
chr10	65420232	.	C	CAAA	8967.12	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=11.903;DP=482;FS=1.482;HRun=7;HaplotypeScore=125.4244;InbreedingCoeff=0.9666;MQ=51.43;MQ0=14;MQRankSum=-13.412;QD=28.47;ReadPosRankSum=1.904;VQSLOD=2.4727;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:16,19:35:77.57:1181,78,0	1/1:2,4:6:12.04:219,12,0	0/0:30,0:17:25.38:0,25,395	0/0:23,0:11:20.21:0,20,174	0/0:23,0:23:63.20:0,63,841	1/1:8,5:12:23.80:349,24,0	1/1:16,3:23:37.77:502,38,0	0/0:33,0:33:46.24:0,46,796	0/0:7,0:7:18.05:0,18,245	1/1:8,3:11:25.78:269,26,0	1/1:4,3:8:17.25:193,17,0	1/1:8,5:12:22.69:301,23,0	0/0:16,0:16:42.12:0,42,556	1/1:12,4:15:33.46:402,33,0	1/1:3,10:12:32.63:523,33,0	1/1:9,7:16:40.51:499,41,0	1/1:10,17:26:57.48:937,57,0	1/1:8,5:13:30.91:421,31,0	1/1:23,3:23:37.30:415,37,0	1/1:7,5:12:25.16:316,25,0	1/1:4,1:5:6.45:62,6,0	1/1:4,6:10:24.54:365,25,0	0/0:12,0:12:33.10:0,33,433	0/0:23,0:21:51.16:0,51,694	1/1:6,5:11:13.64:320,14,0	1/1:12,7:19:46.46:552,46,0	1/1:19,13:31:65.04:907,65,0	1/1:1,4:5:14.54:234,15,0
chr10	65420235	.	AAAAAC	A	1522.63	PASS	AB=0.962;AC=19;AF=0.339;AN=56;BaseQRankSum=-1.284;DP=486;FS=6.532;HRun=0;HaplotypeScore=167.1133;InbreedingCoeff=-0.3870;MQ=58.05;MQ0=12;MQRankSum=-5.408;QD=5.20;ReadPosRankSum=-8.291;VQSLOD=-0.5562;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:35,0:34:33.25:33,0,687	0/1:7,0:7:48.01:48,0,144	0/0:32,0:21:52.36:0,52,821	0/0:26,0:14:17.69:0,18,304	0/0:22,0:22:60.21:0,60,1668	0/1:12,0:11:74.99:75,0,176	0/1:17,5:22:29.62:30,0,247	0/0:31,0:31:58.42:0,58,1682	0/0:8,0:8:24.08:0,24,589	0/1:12,0:12:89.45:101,0,89	0/1:8,0:8:80.01:87,0,80	0/1:14,0:13:97.81:122,0,98	0/0:15,0:15:39.13:0,39,1141	0/1:16,0:15:99:156,0,161	0/0:12,0:11:18.42:0,18,390	0/1:14,2:16:99:170,0,205	0/1:27,0:26:35.26:35,0,471	0/1:13,0:13:12.73:13,0,230	0/1:26,0:24:99:152,0,238	0/1:9,3:12:99:155,0,148	1/1:6,0:6:8.88:87,9,0	0/1:11,0:11:35.44:35,0,288	0/0:13,0:13:36.12:0,36,849	0/0:23,0:21:54.17:0,54,1416	0/0:11,0:11:0.76:0,1,139	0/1:15,3:18:99:242,0,219	0/1:33,0:32:99:99,0,408	0/1:5,0:5:43.33:43,0,94
chr10	65420238	.	AAC	A	4156.73	PASS	AB=0.909;AC=39;AF=0.696;AN=56;BaseQRankSum=8.549;DP=475;FS=1.558;HRun=0;HaplotypeScore=135.8901;InbreedingCoeff=0.8405;MQ=60.47;MQ0=8;MQRankSum=-9.631;QD=13.37;ReadPosRankSum=-3.803;VQSLOD=3.0079;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:24,10:33:38.94:412,39,0	1/1:6,0:6:7.91:58,8,0	0/0:31,0:22:56.70:0,57,650	0/0:25,0:15:24.97:0,25,245	0/0:22,0:22:63.20:0,63,1063	1/1:10,1:10:9.27:103,9,0	1/1:15,6:21:21.48:292,21,0	0/0:29,0:29:71.28:0,71,1176	0/0:8,0:8:24.07:0,24,385	1/1:9,3:12:21.95:285,22,0	1/1:7,1:8:15.95:158,16,0	1/1:13,1:13:19.10:191,19,0	0/0:14,0:14:42.13:0,42,697	1/1:14,3:16:16.18:256,16,0	1/1:13,0:11:3.50:50,3,0	1/1:14,2:16:21.90:247,22,0	1/1:24,2:25:16.53:161,17,0	1/1:8,5:13:21.83:234,22,0	1/1:24,4:26:55.23:552,55,0	1/1:12,0:12:14.26:144,14,0	1/1:6,0:6:9.43:85,9,0	0/1:9,1:10:7.93:97,0,8	0/0:13,0:13:36.12:0,36,610	0/0:22,0:20:54.16:0,54,904	1/1:8,2:10:10.34:110,10,0	1/1:17,1:18:27.43:347,27,0	1/1:26,4:29:28.55:331,29,0	1/1:6,0:6:6.40:44,6,0
chr10	65420239	.	AC	A	4384.18	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=13.707;DP=473;FS=0.870;HRun=1;HaplotypeScore=129.0186;InbreedingCoeff=0.9704;MQ=61.90;MQ0=6;MQRankSum=-13.420;QD=14.14;ReadPosRankSum=2.579;VQSLOD=4.4618;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:33,2:34:82.19:418,82,0	1/1:5,1:6:16.93:89,17,0	0/0:30,0:22:53.63:0,54,538	0/0:23,2:16:6.76:0,7,182	0/0:22,0:22:61.08:0,61,818	1/1:9,3:11:28.69:176,29,0	1/1:18,2:20:43.12:263,43,0	0/0:29,0:29:74.27:0,74,965	0/0:9,0:9:27.06:0,27,335	1/1:8,4:12:31.83:201,32,0	1/1:7,1:8:23.08:149,23,0	1/1:10,3:12:31.40:187,31,0	0/0:14,0:14:42.12:0,42,554	1/1:17,1:17:45.06:276,45,0	1/1:12,1:11:30.67:154,31,0	1/1:11,4:15:39.95:222,40,0	1/1:24,2:26:61.39:303,61,0	1/1:11,1:12:29.89:173,30,0	1/1:22,6:26:71.08:506,71,0	1/1:8,4:12:29.76:154,30,0	1/1:5,1:6:9.40:67,9,0	1/1:9,1:10:25.33:139,25,0	0/0:12,0:12:36.10:0,36,473	0/0:22,0:20:54.15:0,54,717	1/1:9,1:10:22.79:144,23,0	1/1:11,6:17:48.89:303,49,0	1/1:23,7:29:62.96:372,63,0	1/1:6,0:6:16.99:90,17,0
chr10	65420240	.	C	CAAA	10777.57	PASS	AB=0.741;AC=39;AF=0.696;AN=56;BaseQRankSum=9.623;DP=480;FS=0.848;HRun=7;HaplotypeScore=122.2324;InbreedingCoeff=0.8983;MQ=63.91;MQ0=6;MQRankSum=-11.452;QD=34.21;ReadPosRankSum=3.522;VQSLOD=3.1788;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:16,20:35:33.34:1168,33,0	1/1:2,4:6:18.06:303,18,0	0/0:31,0:24:55.95:0,56,685	0/0:24,0:16:22.03:0,22,236	0/0:22,0:22:60.19:0,60,900	1/1:7,5:11:30.03:464,30,0	0/1:13,7:20:0.63:467,0,1	0/0:30,0:30:67.40:0,67,1096	0/0:9,0:9:27.08:0,27,390	1/1:9,3:12:16.80:360,17,0	1/1:4,4:8:19.12:321,19,0	1/1:9,5:13:33.04:490,33,0	0/0:14,0:14:39.13:0,39,597	1/1:14,4:17:32.57:527,33,0	1/1:3,10:11:30.55:561,31,0	1/1:8,7:15:31.60:656,32,0	1/1:11,17:27:60.76:1055,61,0	1/1:7,5:12:0.49:267,0,0	1/1:24,3:26:23.37:638,23,0	1/1:8,5:13:30.10:501,30,0	1/1:5,1:6:9.86:102,10,0	1/1:5,5:10:16:419,16,0	0/0:12,0:12:36.12:0,36,537	0/0:22,0:20:54.17:0,54,801	1/1:5,5:10:23.65:371,24,0	1/1:12,7:19:47.49:762,47,0	1/1:11,19:29:55.04:1018,55,0	1/1:2,4:6:18.05:326,18,0
chr10	65421065	.	CCTCTCTCTCTCTCT	C	9467.27	PASS	AB=0.710;AC=35;AF=0.673;AN=52;BaseQRankSum=8.386;DP=605;FS=1.349;HRun=0;HaplotypeScore=213.3264;InbreedingCoeff=0.6203;MQ=66.32;MQ0=9;MQRankSum=-5.562;QD=24.34;ReadPosRankSum=3.399;VQSLOD=4.0143;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:17,13:29:53.39:183,0,53	1/1:5,6:11:11.99:311,12,0	./.	0/0:34,0:18:2.22:0,2,7	0/0:18,0:17:18.04:0,18,725	1/1:8,8:14:15.52:591,16,0	0/1:11,8:18:13.98:14,0,60	0/0:27,0:27:35.42:0,35,1319	0/0:19,0:27:11.93:0,12,262	1/1:15,0:27:27.58:715,28,0	1/1:9,0:24:14.79:488,15,0	1/1:10,9:19:15.05:590,15,0	0/0:20,0:20:29.63:0,30,1326	1/1:8,10:18:18.06:644,18,0	1/1:11,14:23:27:866,27,0	1/1:6,8:17:27.08:910,27,0	./.	1/1:12,5:14:5.95:139,6,0	1/1:15,1:20:2.82:234,3,0	1/1:15,14:30:33.07:1181,33,0	1/1:15,7:22:8.97:255,9,0	0/1:10,0:15:6.64:109,0,7	0/0:11,0:11:21.07:0,21,1050	0/0:18,0:29:32.22:0,32,1887	1/1:9,13:23:24.06:789,24,0	1/1:13,11:22:27.09:807,27,0	1/1:11,7:18:15.52:521,16,0	1/1:9,1:9:3.01:118,3,0
chr10	65422030	.	AGG	A	4291.73	PASS	AB=1.000;AC=41;AF=0.732;AN=56;BaseQRankSum=-3.538;DP=429;FS=36.119;HRun=13;HaplotypeScore=61.3530;InbreedingCoeff=0.7969;MQ=78.99;MQ0=0;MQRankSum=-1.680;QD=13.50;ReadPosRankSum=6.366;VQSLOD=0.8514;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,2:15:22.95:156,23,0	1/1:2,2:4:6:58,6,0	0/0:16,0:13:24.43:0,24,257	0/0:18,0:16:17.51:0,18,160	0/0:9,0:11:15.67:0,16,116	1/1:2,9:12:21.03:203,21,0	1/1:7,21:28:30.30:366,30,0	0/0:17,0:18:2.76:0,3,56	0/0:17,0:18:43.10:0,43,362	1/1:5,9:14:26.99:252,27,0	1/1:2,5:8:11.74:93,12,0	1/1:11,16:29:30.57:262,31,0	0/0:13,0:13:24.05:0,24,309	1/1:5,6:12:14.76:128,15,0	1/1:4,7:11:21.03:201,21,0	1/1:3,13:17:32.51:286,33,0	1/1:10,23:34:59.84:582,60,0	1/1:7,18:27:50.69:464,51,0	1/1:5,5:10:14.93:137,15,0	1/1:6,4:10:11.82:100,12,0	1/1:7,15:24:35.78:332,36,0	1/1:2,9:11:11.89:109,12,0	1/1:5,0:5:0.47:1,0,0	0/0:17,0:17:24.19:0,24,278	1/1:3,5:8:6.01:58,6,0	1/1:2,7:9:17.99:174,18,0	1/1:12,15:27:33.01:318,33,0	0/1:3,0:3:12.60:13,0,17
chr10	65424126	.	T	TG	1241.64	PASS	AB=0.986;AC=27;AF=0.482;AN=56;BaseQRankSum=6.063;DP=595;FS=48.311;HRun=0;HaplotypeScore=159.0464;InbreedingCoeff=0.1030;MQ=54.53;MQ0=11;MQRankSum=7.330;QD=2.98;ReadPosRankSum=8.027;VQSLOD=1.1297;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:28:15.04:91,0,15	1/1:12,0:12:6.14:35,6,0	0/0:29,0:7:12.58:0,13,79	0/0:26,0:7:11.69:0,12,86	0/0:28,0:28:75.69:0,76,733	0/1:12,0:12:12.22:25,0,12	0/1:18,0:18:10.82:66,0,11	0/0:17,0:16:29.75:0,30,235	0/0:13,0:13:33.69:0,34,249	1/1:13,9:21:7:126,7,0	0/1:20,6:26:9.57:80,0,10	0/1:24,0:23:3.34:53,0,3	0/0:23,0:22:59.62:0,60,560	0/1:18,0:18:4.67:29,0,5	1/1:14,0:14:10.48:97,10,0	0/1:21,0:21:26.08:53,0,26	1/1:34,0:34:28.85:145,29,0	1/1:23,0:23:13.95:115,14,0	0/1:16,0:15:59.37:59,0,82	0/1:23,0:23:5.47:55,0,5	0/1:14,0:14:20.78:65,0,21	0/1:15,0:15:13.02:13,0,14	0/0:16,0:16:34.25:0,34,351	0/0:27,0:27:42.56:0,43,436	0/1:28,0:27:46.66:92,0,47	1/1:25,0:25:8.04:118,8,0	0/1:26,0:26:1.94:68,0,2	1/1:16,0:16:2.57:34,3,0
chr10	65424128	.	T	TTTG	1366.17	PASS	AB=0.986;AC=16;AF=0.286;AN=56;BaseQRankSum=0.860;DP=599;FS=0.000;HRun=0;HaplotypeScore=181.5075;InbreedingCoeff=-0.2405;MQ=54.14;MQ0=12;MQRankSum=-4.689;QD=4.41;ReadPosRankSum=-7.954;VQSLOD=0.0837;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:27:38.97:0,39,282	0/1:12,0:12:8.04:8,0,97	0/0:30,0:8:14.79:0,15,104	0/0:26,0:7:11.60:0,12,67	0/0:28,0:28:69.42:0,69,668	0/0:12,0:12:8.38:0,8,180	0/1:18,0:18:91.93:92,0,131	0/0:16,0:15:26.71:0,27,228	0/0:13,0:14:7.69:0,8,114	1/1:16,8:23:29.75:536,30,0	0/1:19,6:25:38.59:398,0,39	0/1:23,0:22:27.53:28,0,141	0/0:22,0:21:56.59:0,57,548	0/1:20,0:20:49.49:49,0,124	0/1:13,0:13:16.55:17,0,90	0/0:21,0:21:33.33:0,33,245	0/1:34,0:34:30.94:31,0,211	0/0:23,0:23:28.89:0,29,222	0/1:18,0:17:15.74:16,0,97	0/0:23,0:23:3.19:0,3,210	0/1:14,0:14:13.96:14,0,107	0/1:16,0:16:28.35:116,0,28	0/0:17,0:17:35.95:0,36,381	0/0:28,0:28:56.95:0,57,507	0/1:24,0:23:59.22:59,0,89	0/1:23,0:23:52.28:52,0,94	0/1:27,0:27:86.32:102,0,86	0/1:19,0:19:9.54:10,0,116
chr10	65424132	.	TG	T	5287.34	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=12.202;DP=584;FS=8.653;HRun=1;HaplotypeScore=141.1364;InbreedingCoeff=0.8852;MQ=48.78;MQ0=12;MQRankSum=-3.707;QD=12.96;ReadPosRankSum=8.067;VQSLOD=3.0662;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:27:36.05:308,36,0	1/1:12,0:12:33.47:194,33,0	0/0:28,0:6:7.05:0,7,72	0/0:25,0:7:1.71:0,2,27	0/0:25,0:25:55.26:0,55,485	1/1:11,0:11:20.17:106,20,0	1/1:15,0:15:38.68:208,39,0	0/0:21,0:20:42.18:0,42,293	0/0:12,0:12:3.32:0,3,82	1/1:26,0:25:58.18:302,58,0	1/1:23,0:23:46.54:212,47,0	1/1:22,0:21:47.12:289,47,0	0/0:22,0:21:33.80:0,34,404	1/1:20,0:20:40.04:214,40,0	1/1:12,0:12:24.82:171,25,0	1/1:21,0:21:50.75:277,51,0	1/1:34,0:33:81.94:511,82,0	1/1:21,1:21:54.28:334,54,0	1/1:16,1:16:16.80:210,17,0	1/1:23,1:23:54.95:322,55,0	1/1:12,1:13:27.68:157,28,0	1/1:16,0:16:41.73:233,42,0	0/0:16,0:16:28.83:0,29,295	0/0:27,0:27:3.12:0,3,251	1/1:23,0:22:43.87:282,44,0	1/1:21,2:23:55.71:414,56,0	1/1:25,1:26:51.42:304,51,0	1/1:19,0:19:39.69:243,40,0
chr10	65424133	.	G	GT	10194.21	PASS	AB=1.000;AC=41;AF=0.732;AN=56;BaseQRankSum=9.313;DP=597;FS=0.000;HRun=16;HaplotypeScore=129.6789;InbreedingCoeff=0.8702;MQ=48.70;MQ0=13;MQRankSum=-3.230;QD=23.54;ReadPosRankSum=6.533;VQSLOD=5.4223;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:27,2:28:46.48:583,46,0	1/1:12,0:12:35.90:349,36,0	0/0:28,0:6:5.87:0,6,137	0/0:25,0:7:7.23:0,7,52	0/0:27,0:27:65.45:0,65,663	1/1:12,0:12:29.72:255,30,0	1/1:16,0:16:43.93:389,44,0	0/0:21,0:20:38.47:0,38,385	0/1:13,0:13:14.34:14,0,74	1/1:12,16:27:63.17:786,63,0	1/1:13,11:24:60.26:633,60,0	1/1:23,0:22:52.23:548,52,0	0/0:22,0:21:17.77:0,18,510	1/1:20,0:20:41.61:393,42,0	1/1:13,0:12:22.35:295,22,0	1/1:19,2:21:56.47:519,56,0	1/1:31,3:33:90.02:925,90,0	1/1:22,0:21:56.96:531,57,0	1/1:14,4:17:41.07:426,41,0	1/1:25,1:25:59.47:555,59,0	1/1:12,1:13:32.29:317,32,0	1/1:14,2:16:44.92:449,45,0	0/0:16,0:16:24.99:0,25,423	0/0:25,0:25:13.27:0,13,425	1/1:18,6:23:56.13:582,56,0	1/1:21,2:23:62.85:665,63,0	1/1:23,3:26:59.45:542,59,0	1/1:16,3:19:44.97:438,45,0
chr10	65424148	.	T	TTTTG	682.22	PASS	AB=1.000;AC=4;AF=0.071;AN=56;BaseQRankSum=2.440;DP=596;FS=18.795;HRun=0;HaplotypeScore=188.7699;InbreedingCoeff=0.4174;MQ=50.57;MQ0=13;MQRankSum=-4.297;QD=9.89;ReadPosRankSum=2.422;VQSLOD=1.4602;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:28:59.87:0,60,739	0/0:14,0:14:27.01:0,27,338	0/0:24,0:7:15.05:0,15,232	0/0:30,0:9:4.38:0,4,122	0/0:27,0:27:75.15:0,75,1076	0/0:10,0:10:20.98:0,21,238	0/0:16,0:16:35.86:0,36,373	0/0:24,0:23:42.13:0,42,618	1/1:5,7:12:24.08:517,24,0	0/1:31,0:30:99:175,0,359	0/1:26,0:26:99:104,0,224	0/0:25,0:24:41.19:0,41,460	0/0:20,0:19:38.53:0,39,526	0/0:21,0:21:44.89:0,45,498	0/0:11,0:10:26.97:0,27,313	0/0:19,0:19:45.09:0,45,599	0/0:33,0:32:68.94:0,69,817	0/0:21,0:20:42.01:0,42,532	0/0:16,0:15:29.94:0,30,321	0/0:27,0:26:54.09:0,54,718	0/0:18,0:17:29.98:0,30,357	0/0:15,0:15:38.97:0,39,431	0/0:16,0:16:33.11:0,33,549	0/0:23,0:23:39.03:0,39,588	0/0:24,0:23:38.92:0,39,391	0/0:22,0:22:59.73:0,60,646	0/0:24,0:24:51.05:0,51,627	0/0:16,0:16:30.82:0,31,387
chr10	65424175	.	CT	C	6679.57	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=11.297;DP=521;FS=2.687;HRun=8;HaplotypeScore=105.7845;InbreedingCoeff=0.9703;MQ=48.69;MQ0=16;MQRankSum=-2.239;QD=17.91;ReadPosRankSum=3.675;VQSLOD=4.5264;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:9,24:29:36.05:348,36,0	1/1:2,12:14:36.05:346,36,0	0/0:12,0:5:9.03:0,9,109	0/0:12,0:6:9:0,9,95	0/0:31,0:31:72.17:0,72,838	1/1:2,6:8:18.03:172,18,0	1/1:2,13:15:36.05:348,36,0	0/0:24,0:24:45.61:0,46,545	0/0:13,0:12:21.05:0,21,243	1/1:5,19:24:57.08:550,57,0	1/1:4,15:19:36.05:347,36,0	1/1:4,14:18:30.04:289,30,0	0/0:16,0:15:42.13:0,42,507	1/1:1,19:20:39.06:374,39,0	1/1:6,4:7:12.02:116,12,0	1/1:4,10:14:21.02:203,21,0	1/1:5,24:27:45.06:435,45,0	1/1:2,13:13:33.05:319,33,0	1/1:4,8:11:21.02:202,21,0	1/1:4,22:26:48.05:462,48,0	1/1:2,14:15:26.67:260,27,0	1/1:2,19:20:45.07:434,45,0	0/0:16,0:14:21.06:0,21,244	0/0:24,0:24:66.12:0,66,762	1/1:4,17:21:42.07:405,42,0	1/1:6,15:21:48.07:463,48,0	1/1:5,19:23:39.04:376,39,0	1/1:2,11:13:24.04:231,24,0
chr10	65424699	.	CA	C	10789.39	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=8.792;DP=671;FS=0.000;HRun=9;HaplotypeScore=68.4146;InbreedingCoeff=0.9967;MQ=77.29;MQ0=0;MQRankSum=-2.208;QD=22.43;ReadPosRankSum=4.612;VQSLOD=5.3987;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,37:42:99:961,105,0	1/1:2,15:16:39.02:356,39,0	0/0:21,0:21:33.09:0,33,375	0/0:15,0:15:22.53:0,23,189	0/0:22,0:22:54.07:0,54,578	1/1:2,29:31:75.03:686,75,0	1/1:2,26:28:63.03:576,63,0	0/0:36,0:36:93.25:0,93,1050	0/0:32,0:33:84.08:0,84,949	1/1:2,20:22:60.03:548,60,0	1/1:1,17:18:39.01:355,39,0	1/1:3,29:32:75.04:686,75,0	0/0:21,0:21:57.13:0,57,628	1/1:0,22:22:60.03:549,60,0	1/1:3,20:23:57.03:522,57,0	1/1:2,31:34:92.08:829,92,0	1/1:2,35:37:87.04:796,87,0	1/1:2,13:15:39.02:357,39,0	1/1:7,13:21:40.78:335,41,0	1/1:0,27:27:72.04:658,72,0	1/1:1,16:17:39.01:357,39,0	1/1:2,16:18:36.02:329,36,0	0/0:17,0:17:42.11:0,42,475	0/0:24,1:25:44.72:0,45,747	1/1:2,9:11:18.01:165,18,0	1/1:0,23:23:69.01:625,69,0	1/1:1,35:36:99:933,102,0	1/1:0,7:7:18.01:165,18,0
chr10	65424943	.	CTT	C	6112.44	PASS	AB=0.719;AC=41;AF=0.732;AN=56;BaseQRankSum=-2.883;DP=607;FS=1.838;HRun=14;HaplotypeScore=84.9604;InbreedingCoeff=0.7017;MQ=67.84;MQ0=8;MQRankSum=0.239;QD=12.84;ReadPosRankSum=5.591;VQSLOD=4.0257;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:9,36:44:72.33:637,72,0	1/1:4,9:14:20.52:215,21,0	0/0:20,0:10:5.93:0,6,58	0/1:14,1:10:8.70:21,0,9	0/0:23,0:23:44.54:0,45,511	1/1:6,9:13:8.06:82,8,0	1/1:4,16:21:32.59:336,33,0	0/1:15,1:33:31.97:32,0,185	0/0:22,0:24:59.64:0,60,750	1/1:4,0:12:21.69:91,22,0	1/1:6,0:21:28.74:133,29,0	1/1:8,12:19:26.80:292,27,0	0/0:19,0:19:41.73:0,42,500	1/1:2,7:10:23.76:205,24,0	1/1:3,19:23:35.80:380,36,0	0/1:6,14:21:41.24:275,0,41	1/1:4,22:26:56.99:527,57,0	1/1:6,5:12:26.16:206,26,0	1/1:6,19:25:56.87:504,57,0	1/1:6,19:24:40.82:382,41,0	1/1:5,18:23:38.66:344,39,0	1/1:3,11:14:21.05:216,21,0	0/0:10,0:15:31.34:0,31,256	0/0:26,0:28:64.94:0,65,728	1/1:6,19:26:37.35:390,37,0	1/1:6,10:17:32.14:257,32,0	1/1:9,21:30:39.94:347,40,0	1/1:6,11:16:20.88:241,21,0
chr10	65425113	.	C	CAG	20043.87	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-1.397;DP=595;FS=2.012;HRun=0;HaplotypeScore=83.3367;InbreedingCoeff=0.9891;MQ=81.71;MQ0=0;MQRankSum=-1.577;QD=45.87;ReadPosRankSum=4.726;VQSLOD=6.5483;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,39:40:99:1866,102,0	1/1:0,5:5:9.03:165,9,0	0/0:14,0:14:36.05:0,36,472	0/0:19,0:19:54.06:0,54,677	0/0:19,0:19:54.17:0,54,754	1/1:0,19:19:54.19:990,54,0	1/1:1,21:23:54.19:988,54,0	0/0:25,0:25:72.23:0,72,999	0/0:19,0:19:54.17:0,54,753	1/1:1,23:24:69.21:1232,69,0	1/1:3,19:22:39.13:714,39,0	1/1:0,19:19:51.17:935,51,0	0/0:15,0:15:45.13:0,45,626	1/1:0,18:19:54.19:990,54,0	1/1:3,24:28:66.22:1189,66,0	1/1:2,25:27:20.31:1057,20,0	1/1:1,32:33:87.30:1595,87,0	1/1:0,17:17:48.16:880,48,0	1/1:0,14:14:42.12:738,42,0	1/1:2,22:24:54.19:990,54,0	1/1:3,34:37:96.32:1760,96,0	1/1:1,17:18:42.14:768,42,0	0/0:11,0:11:33.10:0,33,454	0/0:36,0:36:99:0,102,1401	1/1:0,13:13:39.13:715,39,0	1/1:2,21:23:66.22:1209,66,0	1/1:1,20:21:45.14:824,45,0	1/1:3,8:11:24.07:440,24,0
chr10	65425620	.	CCT	C	1278.09	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.618;DP=783;FS=9.797;HRun=0;HaplotypeScore=92.7068;InbreedingCoeff=0.9995;MQ=84.53;MQ0=0;MQRankSum=-0.283;QD=38.73;ReadPosRankSum=-3.554;VQSLOD=4.2045;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,148,2683	0/0:12,0:12:30.10:0,30,533	0/0:30,0:29:69.23:0,69,1163	0/0:27,0:27:75.21:0,75,1223	0/0:21,0:21:63.22:0,63,1146	0/0:24,0:24:72.25:0,72,1315	0/0:27,0:27:78.27:0,78,1389	1/1:1,32:33:96.32:1373,96,0	0/0:24,0:24:72.25:0,72,1303	0/0:42,0:42:99:0,126,2257	0/0:22,0:22:63.22:0,63,1146	0/0:31,0:31:93.32:0,93,1688	0/0:35,0:35:99:0,102,1834	0/0:29,0:29:81.28:0,81,1472	0/0:32,0:32:96.33:0,96,1734	0/0:34,0:34:99:0,102,1835	0/0:31,0:31:87.30:0,87,1595	0/0:24,0:24:72.25:0,72,1320	0/0:22,0:22:57.19:0,57,978	0/0:24,0:24:69.23:0,69,1221	0/0:28,0:28:81.26:0,81,1454	0/0:28,0:28:75.24:0,75,1344	0/0:23,0:23:69.24:0,69,1259	0/0:36,0:36:99:0,102,1870	0/0:26,0:26:78.27:0,78,1430	0/0:33,0:33:90.31:0,90,1633	0/0:18,0:18:54.19:0,54,990	0/0:15,0:15:42.14:0,42,770
chr10	65426111	.	TATA	T	144.30	PASS	AB=0.971;AC=12;AF=0.214;AN=56;BaseQRankSum=10.954;DP=481;FS=34.268;HRun=0;HaplotypeScore=78.8793;InbreedingCoeff=-0.0409;MQ=74.46;MQ0=2;MQRankSum=0.089;QD=0.84;ReadPosRankSum=6.915;VQSLOD=-0.2321;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:17,2:19:21.93:22,0,167	1/1:7,0:7:3.30:19,3,0	0/0:34,0:19:40.70:0,41,402	0/0:17,0:10:20.31:0,20,236	0/0:9,0:9:22.28:0,22,289	0/0:16,0:16:20.62:0,21,270	0/0:14,0:14:1.12:0,1,56	0/0:26,0:26:29.63:0,30,440	0/0:21,0:21:57.32:0,57,662	0/0:24,0:24:56.43:0,56,482	0/0:17,0:17:42.32:0,42,298	0/1:14,0:14:19.98:20,0,125	0/0:13,0:13:39.05:0,39,563	0/1:14,1:15:29.33:29,0,77	0/1:18,2:20:88.12:88,0,205	0/1:21,1:22:47.25:47,0,215	0/0:21,0:21:18.69:0,19,253	0/1:15,0:15:17.79:18,0,75	0/0:16,0:16:20.16:0,20,296	0/1:17,0:17:0.50:0,0,155	0/0:24,0:24:25.21:0,25,335	0/0:5,0:5:14.91:0,15,114	0/0:12,0:12:34.72:0,35,319	0/0:12,0:12:26.57:0,27,449	0/1:13,0:13:23.31:23,0,78	0/1:23,0:23:4.83:5,0,374	0/0:29,0:29:27.68:0,28,376	0/1:6,0:6:2.07:14,0,2
chr10	65427302	.	T	TAG	17642.56	PASS	AB=0.724;AC=28;AF=0.500;AN=56;BaseQRankSum=23.675;DP=992;FS=11.784;HRun=0;HaplotypeScore=156.0913;InbreedingCoeff=-1.0000;MQ=67.73;MQ0=6;MQRankSum=-13.859;QD=17.78;ReadPosRankSum=2.184;VQSLOD=4.3345;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:25,15:39:99:623,0,1014	0/1:14,10:25:99:535,0,608	0/1:21,5:26:99:271,0,620	0/1:19,5:21:99:251,0,466	0/1:24,15:39:99:677,0,1030	0/1:20,21:43:99:1150,0,855	0/1:10,9:18:99:375,0,414	0/1:41,22:59:99:823,0,1576	0/1:23,11:32:99:371,0,959	0/1:25,15:41:99:818,0,1050	0/1:20,13:31:99:574,0,885	0/1:21,12:33:99:631,0,878	0/1:20,15:35:99:634,0,876	0/1:16,16:33:99:868,0,657	0/1:28,15:43:99:726,0,1239	0/1:24,16:39:99:795,0,1057	0/1:31,9:42:99:371,0,1307	0/1:27,12:39:99:498,0,1203	0/1:17,11:27:99:531,0,681	0/1:26,9:35:99:383,0,1167	0/1:16,13:29:99:710,0,548	0/1:18,6:24:99:285,0,807	0/1:29,15:44:99:720,0,1243	0/1:11,9:19:99:345,0,484	0/1:28,14:42:99:722,0,1211	0/1:20,21:39:99:1030,0,813	0/1:24,20:46:99:1086,0,991	0/1:9,16:25:99:839,0,339
chr10	65428658	.	C	CG	3756.24	PASS	AB=0.874;AC=39;AF=0.722;AN=54;BaseQRankSum=5.330;DP=514;FS=5.356;HRun=0;HaplotypeScore=125.4137;InbreedingCoeff=0.6555;MQ=42.11;MQ0=35;MQRankSum=-5.667;QD=10.15;ReadPosRankSum=0.919;VQSLOD=4.0955;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:11,7:22:14.54:221,15,0	1/1:8,3:9:23.43:176,23,0	./.	0/1:15,0:7:13.77:27,0,14	0/0:20,0:24:53.40:0,53,560	1/1:4,11:18:42.24:332,42,0	1/1:9,3:15:22.41:136,22,0	0/0:32,0:32:71.96:0,72,735	0/0:23,0:22:39.03:0,39,412	0/1:19,0:15:12.28:84,0,12	1/1:14,1:14:10.54:121,11,0	1/1:10,5:16:2.99:154,3,0	0/0:12,0:13:25.29:0,25,259	1/1:9,4:15:11.16:119,11,0	1/1:15,2:20:34.65:212,35,0	1/1:7,2:13:25.55:137,26,0	0/1:9,11:21:7.87:213,0,8	1/1:5,3:8:17.88:139,18,0	1/1:9,4:16:18.05:169,18,0	1/1:6,8:16:32.45:215,32,0	1/1:4,3:9:2.91:101,3,0	1/1:9,5:16:26.04:187,26,0	0/0:14,0:17:22.98:0,23,309	0/0:22,0:24:50.15:0,50,665	1/1:8,5:14:11.57:148,12,0	1/1:18,7:30:59.45:422,59,0	1/1:12,7:23:54.64:379,55,0	1/1:5,1:3:8.87:65,9,0
chr10	65428666	.	A	AAAAAC	7447.78	PASS	AB=0.886;AC=36;AF=0.643;AN=56;BaseQRankSum=12.093;DP=581;FS=1.670;HRun=0;HaplotypeScore=159.1914;InbreedingCoeff=0.4273;MQ=45.62;MQ0=34;MQRankSum=-9.138;QD=17.86;ReadPosRankSum=4.273;VQSLOD=4.6737;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:22,4:29:18.63:806,19,0	1/1:13,3:14:27.92:303,28,0	0/1:10,0:5:13.12:13,0,33	0/0:20,0:9:14.97:0,15,135	0/0:27,0:26:62.61:0,63,813	1/1:11,9:22:37.42:731,37,0	0/1:11,4:15:24.41:178,0,24	0/0:37,0:36:79.41:0,79,950	0/0:20,0:19:41.62:0,42,494	0/1:28,0:24:16.67:240,0,17	0/1:15,0:13:37.46:184,0,37	1/1:9,5:13:11.07:229,11,0	0/0:13,0:12:31.22:0,31,325	0/1:14,3:17:18.96:206,0,19	1/1:26,2:23:10.15:201,10,0	1/1:18,2:17:0.07:225,0,0	1/1:16,11:25:17.09:634,17,0	1/1:5,1:9:1.70:199,2,0	1/1:17,3:19:15.08:368,15,0	1/1:20,8:25:46.67:556,47,0	1/1:6,2:9:11.91:328,12,0	1/1:17,4:19:34.16:375,34,0	0/0:21,0:20:44.80:0,45,518	0/0:26,0:24:69.17:0,69,1015	1/1:16,5:20:23.05:325,23,0	1/1:27,7:31:2.64:720,3,0	0/1:16,7:20:32.17:495,0,32	1/1:5,1:3:8.95:132,9,0
chr10	65428673	.	CA	C	3735.15	PASS	AB=0.789;AC=24;AF=0.429;AN=56;BaseQRankSum=7.711;DP=624;FS=15.641;HRun=14;HaplotypeScore=140.9376;InbreedingCoeff=-0.2676;MQ=49.68;MQ0=28;MQRankSum=-4.442;QD=8.21;ReadPosRankSum=3.432;VQSLOD=1.0776;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:19,12:30:99:361,0,129	0/1:5,10:14:40.48:249,0,40	0/1:11,0:6:11.24:15,0,11	0/1:20,1:10:2.86:3,0,143	0/0:28,0:28:74.87:0,75,891	0/1:14,10:24:14.70:235,0,15	0/1:9,6:15:17.49:84,0,17	0/0:44,0:43:84.34:0,84,1189	0/0:18,0:17:41.87:0,42,514	0/1:14,18:28:99:476,0,243	0/1:23,0:20:6.19:6,0,123	0/1:21,0:20:4.88:5,0,19	0/0:16,0:15:39.12:0,39,493	0/0:19,0:19:16.19:0,16,153	0/1:22,7:24:12.59:302,0,13	0/1:14,5:16:99:128,0,104	0/1:18,9:25:99:124,0,184	1/1:3,5:8:19.90:175,20,0	0/1:16,12:26:99:331,0,127	0/1:17,12:26:99:278,0,166	0/1:5,4:9:33.96:82,0,34	0/1:12,10:21:70.73:223,0,71	0/0:20,0:19:40:0,40,485	0/0:24,0:23:66.18:0,66,820	1/1:9,11:19:9.75:237,10,0	0/1:22,12:30:99:338,0,109	0/1:32,0:29:11.79:12,0,195	1/1:2,3:4:8.51:71,9,0
chr10	65428674	.	A	AAAAAACAAAAAAC	18913.24	PASS	AB=1.000;AC=42;AF=0.750;AN=56;BaseQRankSum=8.556;DP=636;FS=2.348;HRun=0;HaplotypeScore=221.9105;InbreedingCoeff=0.7621;MQ=49.89;MQ0=27;MQRankSum=-8.686;QD=38.84;ReadPosRankSum=3.615;VQSLOD=3.9679;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:31:72.78:2166,73,0	1/1:14,0:14:36.12:709,36,0	0/1:11,0:6:17.35:17,0,30	0/1:21,0:10:62.05:62,0,281	0/0:28,0:28:68.83:0,69,1619	1/1:16,0:24:54.15:1817,54,0	1/1:14,0:15:4.35:354,4,0	0/0:44,0:43:69.13:0,69,1382	0/0:18,0:17:34.79:0,35,780	1/1:31,1:28:77.70:1232,78,0	1/1:10,14:26:26.75:458,27,0	1/1:9,10:21:12.51:569,13,0	0/0:15,0:14:36.08:0,36,899	1/1:13,0:19:15.05:362,15,0	1/1:28,0:24:39.12:692,39,0	1/1:19,0:17:30.03:580,30,0	1/1:23,0:25:45.15:1382,45,0	1/1:6,0:8:21.07:590,21,0	1/1:27,0:28:64.89:1116,65,0	1/1:26,0:26:59.49:1160,59,0	1/1:7,0:9:18.06:655,18,0	1/1:20,0:21:42.05:897,42,0	0/0:20,0:19:38.96:0,39,880	0/0:24,0:23:62.92:0,63,1596	1/1:17,0:19:35.95:890,36,0	1/1:29,0:30:63.17:1768,63,0	1/1:13,14:32:9.71:1115,10,0	1/1:4,0:4:9.03:320,9,0
chr10	65428835	.	AAAAG	A	1048.84	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=0.526;DP=588;FS=1.572;HRun=0;HaplotypeScore=119.1087;InbreedingCoeff=0.9856;MQ=64.49;MQ0=1;MQRankSum=-3.041;QD=38.85;ReadPosRankSum=-3.706;VQSLOD=2.9174;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:96.33:0,96,2364	0/0:7,0:7:18.04:0,18,409	0/0:16,0:15:29.41:0,29,738	0/0:19,0:14:25.94:0,26,466	0/0:30,0:30:83.95:0,84,2047	0/0:17,0:17:51.18:0,51,1287	0/0:8,0:8:21.06:0,21,473	1/1:2,25:27:72.19:1144,72,0	0/0:13,0:13:33.11:0,33,847	0/0:24,0:24:63.21:0,63,1560	0/0:25,0:25:75.26:0,75,1896	0/0:16,0:16:42.14:0,42,1076	0/0:15,0:15:38.88:0,39,983	0/0:16,0:16:45.15:0,45,1152	0/0:19,0:19:48.11:0,48,1167	0/0:25,0:24:63.20:0,63,1545	0/0:25,0:25:61.15:0,61,1447	0/0:40,0:40:99:0,113,2754	0/0:23,0:22:54.15:0,54,1309	0/0:23,0:23:60.21:0,60,1478	0/0:12,0:12:36.12:0,36,891	0/0:21,0:21:57.20:0,57,1455	0/0:17,0:17:48.16:0,48,1221	0/0:16,0:16:39.13:0,39,1002	0/0:27,0:27:81.28:0,81,2047	0/0:25,0:24:57.19:0,57,1414	0/0:29,0:28:84.25:0,84,2084	0/0:13,0:13:39.13:0,39,1002
chr10	65429251	.	C	CT	1087.27	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-9.093;DP=712;FS=2.397;HRun=2;HaplotypeScore=66.8375;InbreedingCoeff=0.9991;MQ=72.26;MQ0=0;MQRankSum=0.664;QD=33.98;ReadPosRankSum=-3.859;VQSLOD=2.3795;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,129,1549	0/0:12,0:12:36.10:0,36,434	0/0:21,0:20:45.04:0,45,511	0/0:23,0:22:60.52:0,61,685	0/0:16,0:16:45.13:0,45,545	0/0:13,0:13:33.09:0,33,395	0/0:25,0:25:72.18:0,72,843	1/1:3,29:32:87.25:1182,87,0	0/0:17,0:17:48.13:0,48,578	0/0:37,0:37:99:0,102,1229	0/0:19,0:19:57.16:0,57,688	0/0:24,0:24:69.20:0,69,830	0/0:22,0:22:60.17:0,60,720	0/0:18,0:18:54.17:0,54,665	0/0:32,0:32:93.27:0,93,1120	0/0:32,0:32:93.29:0,93,1151	0/0:40,0:40:99:0,117,1435	0/0:21,0:21:51.11:0,51,591	0/0:28,0:28:75.19:0,75,890	0/0:31,0:31:90.28:0,90,1114	0/0:43,0:43:99:0,123,1510	0/0:25,0:25:75.16:0,75,874	0/0:20,0:20:51.13:0,51,606	0/0:28,0:28:81.24:0,81,992	0/0:24,0:24:72.16:0,72,840	0/0:30,0:30:84.24:0,84,1016	0/0:23,0:23:66.19:0,66,804	0/0:12,0:12:30.07:0,30,357
chr10	65430067	.	TA	T	15934.51	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=10.828;DP=658;FS=7.354;HRun=3;HaplotypeScore=62.5701;InbreedingCoeff=0.9995;MQ=80.34;MQ0=0;MQRankSum=-5.200;QD=34.12;ReadPosRankSum=5.430;VQSLOD=5.0709;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,34:34:96.30:1190,96,0	1/1:0,11:11:33.10:409,33,0	0/0:33,0:33:93.23:0,93,1243	0/0:14,0:14:22.95:0,23,412	0/0:28,0:28:81.27:0,81,1157	1/1:0,18:18:51.16:632,51,0	1/1:0,19:19:45.14:558,45,0	0/0:24,0:24:69.23:0,69,978	0/0:21,0:21:63.21:0,63,907	1/1:0,17:17:51.16:629,51,0	1/1:0,26:26:75.24:930,75,0	1/1:1,24:25:66.21:818,66,0	0/0:23,0:23:66.21:0,66,915	1/1:1,20:21:60.19:737,60,0	1/1:0,31:31:90.28:1116,90,0	1/1:1,27:28:81.25:1004,81,0	1/1:2,29:31:78.24:967,78,0	1/1:1,20:21:54.17:668,54,0	1/1:0,20:20:60.19:742,60,0	1/1:0,25:25:75.24:928,75,0	1/1:0,17:17:45.14:558,45,0	1/1:0,12:12:33.10:409,33,0	0/0:32,0:32:93.30:0,93,1320	0/0:16,0:16:45.11:0,45,609	1/1:0,29:29:72.23:893,72,0	1/1:2,27:29:81.19:961,81,0	1/1:0,38:38:99:1265,102,0	1/1:0,15:15:42.13:521,42,0
chr10	65431970	.	T	TA	1588.80	PASS	AB=0.949;AC=27;AF=0.482;AN=56;BaseQRankSum=9.235;DP=584;FS=2.406;HRun=14;HaplotypeScore=136.8379;InbreedingCoeff=-0.4221;MQ=67.93;MQ0=7;MQRankSum=-8.963;QD=3.30;ReadPosRankSum=-1.273;VQSLOD=1.0858;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:14,1:14:46.11:46,0,50	0/1:10,0:10:2.19:47,0,2	0/1:42,0:23:11.90:12,0,95	0/1:21,1:12:1.33:1,0,29	0/0:25,1:30:2.12:0,2,237	0/1:24,1:26:23.08:101,0,23	0/1:9,1:10:38.14:38,0,68	1/1:13,17:30:40.82:440,41,0	1/1:6,15:21:18:158,18,0	0/1:24,1:24:34.32:34,0,38	0/1:20,0:22:13.10:75,0,13	0/1:13,2:18:43.38:43,0,84	0/0:18,4:23:10.84:0,11,180	0/1:20,0:21:42.70:74,0,43	0/1:28,0:29:58.15:125,0,58	0/1:23,1:24:61.73:67,0,62	0/1:9,1:10:6.52:36,0,7	0/1:11,1:12:24.86:25,0,35	0/1:18,2:20:51.36:51,0,96	0/1:21,0:21:54.06:54,0,112	0/1:13,0:15:7.03:7,0,30	0/1:16,1:18:53.40:53,0,100	0/0:28,0:31:41.77:0,42,373	0/0:18,0:19:41.36:0,41,269	0/1:12,1:14:21.03:46,0,21	0/1:27,0:26:10.45:82,0,10	0/1:20,0:21:4.79:71,0,5	1/1:6,0:6:13.78:63,14,0
chr10	65431978	.	A	AAAAAAAC	14017.19	PASS	AB=0.640;AC=39;AF=0.696;AN=56;BaseQRankSum=-1.155;DP=703;FS=3.930;HRun=0;HaplotypeScore=156.2482;InbreedingCoeff=0.8877;MQ=58.47;MQ0=7;MQRankSum=-7.617;QD=29.32;ReadPosRankSum=1.424;VQSLOD=4.4203;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:8,12:21:15:439,15,0	1/1:8,0:8:21.07:523,21,0	0/0:43,0:15:11.73:0,12,117	0/0:27,0:12:10.41:0,10,86	0/0:31,0:31:78.03:0,78,1235	1/1:12,16:32:33.11:1094,33,0	1/1:7,0:14:15.05:248,15,0	0/0:31,0:30:35.75:0,36,345	0/0:23,0:23:31.99:0,32,278	1/1:15,1:38:70.86:1351,71,0	1/1:7,14:26:41.76:892,42,0	1/1:12,0:19:23.95:542,24,0	0/0:20,0:20:44.32:0,44,634	1/1:7,12:23:21.32:696,21,0	1/1:12,18:35:45.15:1491,45,0	1/1:8,19:30:18.06:584,18,0	1/1:2,7:14:6.49:213,6,0	0/1:7,7:16:4.55:184,0,5	1/1:14,0:25:25.47:754,25,0	1/1:7,24:35:44.90:1031,45,0	1/1:10,5:17:9.03:227,9,0	1/1:10,15:27:26.84:566,27,0	0/0:32,0:32:66.17:0,66,1012	0/0:18,0:17:45.10:0,45,782	1/1:7,0:24:18.05:403,18,0	1/1:7,18:29:57.09:1423,57,0	1/1:7,20:32:27.09:860,27,0	1/1:0,6:10:15.05:497,15,0
chr10	65431985	.	C	CAAAAAAA	9888.24	PASS	AB=0.985;AC=22;AF=0.393;AN=56;BaseQRankSum=7.327;DP=719;FS=1.675;HRun=14;HaplotypeScore=158.9752;InbreedingCoeff=-0.3506;MQ=54.96;MQ0=7;MQRankSum=-11.202;QD=19.98;ReadPosRankSum=9.722;VQSLOD=0.3758;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:21:66.54:247,0,67	1/1:7,0:7:6.27:60,6,0	0/0:41,0:15:22.54:0,23,291	0/0:24,0:9:7.56:0,8,87	0/0:34,0:34:75.80:0,76,1586	0/1:29,1:30:5.47:920,0,5	0/1:15,0:15:63.01:137,0,63	0/0:33,0:32:30.81:0,31,657	0/0:20,0:20:17.84:0,18,432	0/1:39,0:39:57.45:548,0,57	0/1:23,0:23:13.68:634,0,14	0/1:20,0:20:51.20:430,0,51	0/0:22,0:22:18.50:0,18,715	0/1:24,1:25:47.12:604,0,47	0/1:35,2:37:14.15:1308,0,14	0/1:30,0:30:68.28:470,0,68	0/1:14,0:14:13.89:168,0,14	1/1:15,0:16:3.17:305,3,0	0/1:30,0:30:99:240,0,174	0/1:36,1:37:95.49:763,0,95	0/1:18,0:19:40.21:273,0,40	0/1:28,0:28:75.36:436,0,75	0/0:32,0:32:37.62:0,38,1163	0/0:17,0:16:45.14:0,45,872	0/1:24,1:25:85.54:237,0,86	0/1:33,0:32:87.25:1023,0,87	0/1:33,0:33:28.49:696,0,28	0/1:11,0:11:4.80:389,0,5
chr10	65433526	.	G	GT	1039.64	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-7.311;DP=545;FS=2.184;HRun=7;HaplotypeScore=56.6642;InbreedingCoeff=0.7476;MQ=77.56;MQ0=2;MQRankSum=2.374;QD=28.10;ReadPosRankSum=-5.563;VQSLOD=1.6626;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:60.08:0,60,574	0/0:10,0:10:27.04:0,27,261	0/0:25,0:18:11.24:0,11,129	0/0:24,0:19:0.30:0,0,171	0/0:32,0:32:84.11:0,84,806	0/0:26,0:26:72.11:0,72,695	0/0:9,0:9:24.04:0,24,232	1/1:5,32:37:96.27:1134,96,0	0/0:17,0:17:51.08:0,51,492	0/0:30,0:30:84.13:0,84,811	0/0:29,0:29:78.10:0,78,747	0/0:15,0:15:42.07:0,42,406	0/0:12,0:12:36.06:0,36,348	0/0:8,0:8:24.04:0,24,232	0/0:20,0:20:42.06:0,42,406	0/0:10,0:10:30.03:0,30,284	0/0:22,0:22:60.05:0,60,567	0/0:17,0:17:45.04:0,45,427	0/0:23,0:23:60.09:0,60,579	0/0:23,0:23:66.10:0,66,637	0/0:11,0:11:27.03:0,27,261	0/0:7,0:7:21.03:0,21,203	0/0:16,0:16:39.06:0,39,377	0/0:4,0:4:12:0,12,110	0/0:18,0:18:48.08:0,48,463	0/0:27,0:27:78.13:0,78,753	0/0:30,0:30:87.12:0,87,834	0/0:20,0:20:39:0,39,368
chr10	65434076	.	GA	G	7634.75	PASS	AB=0.667;AC=41;AF=0.732;AN=56;BaseQRankSum=4.750;DP=524;FS=21.869;HRun=11;HaplotypeScore=61.8729;InbreedingCoeff=0.8699;MQ=69.84;MQ0=0;MQRankSum=0.779;QD=19.09;ReadPosRankSum=2.179;VQSLOD=4.0060;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,8:9:23.97:197,24,0	1/1:2,7:9:23.97:197,24,0	0/0:16,1:18:4.51:0,5,262	0/0:8,0:7:9.10:0,9,115	0/0:32,0:33:80.99:0,81,821	1/1:0,30:30:83.89:690,84,0	1/1:1,9:10:23.97:197,24,0	1/1:5,16:21:44.68:347,45,0	0/0:13,1:14:11.41:0,11,314	1/1:5,23:28:68.86:561,69,0	1/1:6,15:21:21.63:342,22,0	0/1:7,7:14:8.04:148,0,8	0/0:19,1:20:20.44:0,20,407	1/1:5,13:18:44.90:365,45,0	1/1:4,16:20:50.89:414,51,0	1/1:2,23:25:62.92:517,63,0	1/1:4,12:16:38.95:320,39,0	1/1:2,9:11:23.96:195,24,0	1/1:5,11:17:34.97:277,35,0	1/1:5,19:24:33.90:479,34,0	1/1:4,12:16:32.93:271,33,0	1/1:3,9:14:15.88:194,16,0	0/0:22,2:24:26.46:0,26,474	0/0:7,0:7:15.04:0,15,160	1/1:1,16:17:47.93:394,48,0	1/1:5,15:21:55.97:449,56,0	1/1:7,27:35:53.93:638,54,0	1/1:6,18:24:53.91:443,54,0
chr10	65434138	.	TAA	T	6035.64	PASS	AB=0.758;AC=40;AF=0.714;AN=56;BaseQRankSum=2.308;DP=435;FS=6.787;HRun=14;HaplotypeScore=68.2979;InbreedingCoeff=0.7635;MQ=61.00;MQ0=1;MQRankSum=-2.306;QD=18.29;ReadPosRankSum=4.158;VQSLOD=4.1286;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,3:10:14.89:139,15,0	1/1:1,4:6:17.76:150,18,0	0/1:6,0:4:12.83:13,0,31	0/0:5,0:4:9.01:0,9,110	0/0:20,0:25:65.60:0,66,759	1/1:5,15:22:38.75:454,39,0	1/1:3,4:8:17.75:151,18,0	0/0:30,0:33:62.62:0,63,767	0/0:8,0:9:18.03:0,18,207	1/1:5,9:16:32.45:273,32,0	1/1:5,14:21:44.36:380,44,0	1/1:0,6:11:7.26:123,7,0	0/0:13,0:16:38.53:0,39,405	1/1:2,8:11:29.77:262,30,0	1/1:6,14:21:41.57:365,42,0	1/1:5,13:20:47.49:412,47,0	1/1:3,15:18:39.01:361,39,0	1/1:2,6:8:11.93:111,12,0	0/1:7,6:16:18.48:232,0,18	1/1:5,18:23:50.88:463,51,0	1/1:5,12:18:26.79:297,27,0	1/1:0,12:12:36.04:333,36,0	0/0:14,0:15:30.02:0,30,352	0/0:2,0:2:3.01:0,3,42	1/1:5,19:24:45.01:416,45,0	1/1:5,15:21:37.99:406,38,0	1/1:6,16:23:53.73:483,54,0	1/1:6,8:14:23.83:212,24,0
chr10	65434742	.	GCCA	G	17766.76	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=12.171;DP=664;FS=1.478;HRun=0;HaplotypeScore=102.9773;InbreedingCoeff=0.9940;MQ=72.62;MQ0=0;MQRankSum=-5.126;QD=38.13;ReadPosRankSum=6.329;VQSLOD=5.1543;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,48:54:99:1625,102,0	1/1:2,5:7:12.04:180,12,0	0/0:16,0:16:39.13:0,39,763	0/0:27,0:26:44.92:0,45,941	0/0:16,0:16:45.15:0,45,993	1/1:4,13:17:39.13:627,39,0	1/1:1,25:26:57.19:916,57,0	0/0:34,0:34:90.31:0,90,1926	0/0:27,0:27:72.25:0,72,1564	1/1:1,13:14:39.13:623,39,0	1/1:1,15:16:30.10:482,30,0	1/1:3,26:29:63.21:1012,63,0	0/0:23,0:23:66.23:0,66,1426	1/1:2,25:27:69.24:1109,69,0	1/1:3,27:30:66.22:1048,66,0	1/1:3,24:27:66.22:1061,66,0	1/1:4,37:41:99:1676,105,0	1/1:0,18:18:45.15:713,45,0	1/1:2,17:19:48.15:739,48,0	1/1:2,14:16:36.12:578,36,0	1/1:1,45:46:99:2024,126,0	1/1:3,15:18:45.15:722,45,0	0/0:17,0:17:48.16:0,48,1043	0/0:38,0:38:99:0,114,2490	1/1:0,12:12:33.11:517,33,0	1/1:2,14:16:42.14:670,42,0	1/1:1,25:26:69.24:1109,69,0	1/1:0,7:7:21.07:337,21,0
chr10	65434746	.	CCA	C	3602.51	PASS	AB=0.977;AC=34;AF=0.607;AN=56;BaseQRankSum=17.995;DP=653;FS=4.781;HRun=0;HaplotypeScore=138.1132;InbreedingCoeff=0.5859;MQ=73.29;MQ0=0;MQRankSum=-3.774;QD=7.92;ReadPosRankSum=9.515;VQSLOD=1.7666;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:50,1:51:65.44:338,65,0	0/1:6,0:6:21.05:21,0,24	0/0:16,0:16:42.14:0,42,728	0/0:26,0:25:58.25:0,58,1055	0/0:17,0:17:51.16:0,51,929	1/1:15,1:16:34.98:146,35,0	1/1:25,1:26:21.87:179,22,0	0/0:35,0:35:99:0,102,1859	0/0:25,0:25:75.26:0,75,1435	1/1:13,0:13:34.51:140,35,0	1/1:16,1:17:17.02:98,17,0	0/1:29,0:29:8.42:169,0,8	0/0:23,0:23:66.23:0,66,1260	0/1:28,0:28:35.09:184,0,35	1/1:27,0:27:55.48:230,55,0	1/1:24,0:24:58.83:242,59,0	1/1:37,0:37:92.31:377,92,0	1/1:18,0:18:37.97:155,38,0	1/1:18,0:18:39.41:158,39,0	0/1:16,0:16:5.71:95,0,6	1/1:46,1:47:78.86:429,79,0	0/1:16,3:19:5.78:126,0,6	0/0:18,0:18:51.17:0,51,974	0/0:38,0:38:99:0,114,2187	1/1:12,0:12:26.01:109,26,0	0/1:17,0:17:30.30:107,0,30	1/1:26,1:27:29.34:222,29,0	1/1:7,0:7:18.75:77,19,0
chr10	65436522	.	A	AAAT	4889.42	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-10.224;DP=582;FS=2.615;HRun=0;HaplotypeScore=79.5368;InbreedingCoeff=0.9885;MQ=74.61;MQ0=0;MQRankSum=-2.357;QD=56.20;ReadPosRankSum=-3.300;VQSLOD=5.7316;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:72.25:0,72,1269	0/0:10,0:10:30.10:0,30,523	0/0:16,0:16:19.78:0,20,468	0/0:7,0:7:17.41:0,17,243	0/0:31,0:31:90.29:0,90,1527	0/0:26,0:26:72.21:0,72,1168	0/0:12,0:12:36.11:0,36,596	1/1:2,23:27:75.22:1508,75,0	0/0:15,0:15:45.12:0,45,736	1/1:2,25:28:75.25:1646,75,0	1/1:1,30:32:84.07:1736,84,0	0/0:13,0:13:39.12:0,39,662	0/0:16,0:16:45.15:0,45,794	0/0:10,0:10:30.10:0,30,519	0/0:15,0:15:45.14:0,45,741	0/0:16,0:16:45.15:0,45,794	0/0:18,0:18:51.17:0,51,899	0/0:17,0:17:48.12:0,48,813	0/0:22,0:22:63.20:0,63,1057	0/0:35,0:35:99:0,105,1762	0/0:21,0:21:63.22:0,63,1102	0/0:25,0:25:75.23:0,75,1262	0/0:27,0:27:81.27:0,81,1398	0/0:5,0:5:15.05:0,15,255	0/0:29,0:29:87.30:0,87,1521	0/0:34,1:35:31.38:0,31,1666	0/0:37,0:37:99:0,111,1847	0/0:12,0:12:36.12:0,36,635
chr10	65437153	.	C	CT	10415	PASS	AB=0.652;AC=43;AF=0.768;AN=56;BaseQRankSum=-12.657;DP=591;FS=10.399;HRun=10;HaplotypeScore=67.9801;InbreedingCoeff=0.4590;MQ=77.09;MQ0=1;MQRankSum=-1.129;QD=20.58;ReadPosRankSum=2.891;VQSLOD=5.4677;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,26:36:30.21:552,30,0	1/1:4,10:14:27.07:288,27,0	0/1:17,2:19:46.12:84,0,46	0/0:12,0:12:11.81:0,12,87	1/1:5,27:33:84.13:870,84,0	1/1:7,18:25:23.48:455,23,0	1/1:4,17:21:45.11:480,45,0	0/0:31,0:31:65.79:0,66,490	1/1:4,11:15:5.47:234,5,0	0/0:32,0:32:77.83:0,78,630	0/0:10,0:10:26.94:0,27,220	1/1:7,11:18:30.07:314,30,0	0/1:7,10:17:31.80:288,0,32	0/1:5,10:15:43.83:194,0,44	1/1:1,19:21:38.26:441,38,0	1/1:5,18:23:29.60:519,30,0	0/1:5,23:28:20.40:615,0,20	1/1:1,14:15:42.11:448,42,0	1/1:5,10:15:5.43:263,5,0	1/1:3,19:22:23.50:455,24,0	1/1:4,12:16:36.09:384,36,0	1/1:2,15:18:26.28:457,26,0	0/1:7,18:26:19.95:402,0,20	1/1:2,17:19:23.48:455,23,0	1/1:5,27:32:75.19:800,75,0	1/1:5,20:25:31.82:488,32,0	1/1:2,19:20:54.14:575,54,0	1/1:0,11:11:33.08:352,33,0
chr10	65437898	.	T	TG	557.07	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-1.423;DP=638;FS=1.832;HRun=7;HaplotypeScore=66.9643;InbreedingCoeff=0.8868;MQ=76.35;MQ0=3;MQRankSum=-1.033;QD=17.97;ReadPosRankSum=-0.744;VQSLOD=3.3959;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:31:84.12:0,84,811	0/0:14,0:14:39.06:0,39,377	0/0:22,0:19:44.61:0,45,398	0/0:20,0:18:41.85:0,42,369	0/0:13,0:13:33.05:0,33,318	0/0:18,0:18:48.08:0,48,463	0/0:21,0:20:57.09:0,57,551	0/0:36,0:36:93.14:0,93,898	0/0:26,0:26:69.10:0,69,666	1/1:6,16:22:51.07:563,51,0	1/1:3,6:9:9.03:108,9,0	0/0:31,0:31:84.11:0,84,806	0/0:19,0:19:57.09:0,57,550	0/0:22,0:22:66.09:0,66,631	0/0:33,0:33:84.12:0,84,811	0/0:25,0:25:66.09:0,66,633	0/0:34,0:34:96.14:0,96,921	0/0:21,0:21:60.08:0,60,573	0/0:30,0:30:72.10:0,72,695	0/0:11,0:11:21.02:0,21,203	0/0:56,0:56:99:0,138,1322	0/0:17,0:17:48.07:0,48,463	0/0:12,0:12:27.03:0,27,255	0/0:28,0:28:75.04:0,75,707	0/0:22,0:22:66.05:0,66,618	0/0:24,1:25:5.80:0,6,337	0/0:15,0:15:36.05:0,36,348	0/0:3,0:3:9.01:0,9,87
chr10	65438249	.	ATT	A	9791.52	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=9.716;DP=591;FS=12.989;HRun=12;HaplotypeScore=107.8341;InbreedingCoeff=0.9980;MQ=72.57;MQ0=0;MQRankSum=-2.623;QD=21.57;ReadPosRankSum=3.443;VQSLOD=2.8651;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,36:39:94.45:949,94,0	1/1:2,11:13:30.05:305,30,0	0/0:16,0:15:23.56:0,24,347	0/0:18,0:18:30.10:0,30,420	0/0:24,0:25:65.67:0,66,874	1/1:2,14:17:39.01:383,39,0	1/1:0,19:19:45.10:458,45,0	1/1:8,30:38:90.16:913,90,0	0/0:13,0:13:36.12:0,36,536	1/1:4,0:28:68.70:299,69,0	1/1:1,0:15:27.40:119,27,0	1/1:1,11:12:30.06:305,30,0	0/0:18,1:19:23.65:0,24,697	1/1:4,11:16:23.76:225,24,0	1/1:3,32:35:59.17:798,59,0	1/1:5,26:31:69.12:702,69,0	1/1:1,20:21:39.05:397,39,0	1/1:1,11:13:26.79:327,27,0	1/1:3,15:20:41.50:444,42,0	1/1:2,18:20:48.03:478,48,0	1/1:7,15:22:42.06:427,42,0	1/1:3,14:17:39.07:397,39,0	0/0:13,0:14:32.57:0,33,433	0/0:28,0:32:83.76:0,84,1176	1/1:2,16:18:39.08:397,39,0	1/1:5,18:23:54.08:549,54,0	1/1:2,21:25:59.60:573,60,0	1/1:0,11:12:35.82:348,36,0
chr10	65438689	.	CCAATTTTTGATA	C	15931.74	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=13.295;DP=382;FS=13.259;HRun=0;HaplotypeScore=135.5044;InbreedingCoeff=0.9702;MQ=73.24;MQ0=0;MQRankSum=-13.499;QD=78.87;ReadPosRankSum=2.982;VQSLOD=4.0617;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,17:17:36.08:1174,36,0	1/1:0,6:6:18.06:684,18,0	0/0:12,0:12:33.09:0,33,1231	0/0:7,0:7:14.25:0,14,829	0/0:21,0:21:60.03:0,60,3264	1/1:0,9:9:21.07:778,21,0	1/1:0,13:13:30.10:1120,30,0	0/0:36,0:36:99:0,102,6281	0/0:17,0:17:45.15:0,45,2406	0/0:20,0:20:57.19:0,57,3150	0/0:22,0:22:54.10:0,54,3119	1/1:0,7:7:18.06:684,18,0	0/0:16,0:16:42.14:0,42,2447	1/1:0,12:12:21.07:798,21,0	1/1:1,14:13:24.08:912,24,0	1/1:0,8:8:15.05:570,15,0	1/1:0,16:16:27.09:1025,27,0	1/1:0,6:6:15.05:570,15,0	1/1:0,10:10:30.02:1043,30,0	1/1:0,18:18:42.14:1500,42,0	1/1:1,6:7:9.03:317,9,0	1/1:0,13:13:27.09:1026,27,0	0/0:17,0:17:45.15:0,45,2489	0/0:12,0:11:33.11:0,33,2048	1/1:0,12:12:30.10:1140,30,0	1/1:1,16:16:42.10:1452,42,0	1/1:1,10:11:21.07:798,21,0	1/1:0,5:5:9.03:342,9,0
chr10	65439182	.	C	CA	1460.69	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-3.783;DP=443;FS=2.910;HRun=4;HaplotypeScore=55.1097;InbreedingCoeff=0.9482;MQ=76.74;MQ0=3;MQRankSum=-2.370;QD=35.63;ReadPosRankSum=1.157;VQSLOD=4.1607;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:51.14:0,51,576	0/0:7,0:7:21.06:0,21,238	0/0:26,0:18:38.24:0,38,392	0/0:26,0:16:18.06:0,18,188	0/0:23,0:22:63.18:0,63,714	0/0:11,0:11:33.09:0,33,374	0/0:14,0:14:36.09:0,36,398	0/0:32,0:32:96.25:0,96,1077	0/0:8,0:8:21.06:0,21,238	1/1:0,23:23:69.21:926,69,0	1/1:1,17:18:48.16:656,48,0	0/0:11,0:11:33.09:0,33,374	0/0:5,0:5:15.04:0,15,170	0/0:7,0:7:18.05:0,18,204	0/0:9,0:9:24.07:0,24,272	0/0:20,0:20:51.98:0,52,551	0/0:16,0:16:42.12:0,42,476	0/0:19,0:19:51.14:0,51,578	0/0:14,0:14:30.08:0,30,336	0/0:16,0:16:48.14:0,48,541	0/0:11,0:11:27.08:0,27,306	0/0:5,0:5:12.03:0,12,129	0/0:14,0:14:33.09:0,33,374	0/0:9,0:9:12.24:0,12,226	0/0:20,0:20:51.14:0,51,578	0/0:11,0:11:33.09:0,33,373	0/0:21,0:21:57.16:0,57,646	0/0:26,0:26:69.20:0,69,783
chr10	65439439	.	TAG	T	2136.59	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.894;DP=605;FS=1.738;HRun=0;HaplotypeScore=69.5401;InbreedingCoeff=0.9971;MQ=86.60;MQ0=0;MQRankSum=0.175;QD=38.15;ReadPosRankSum=-1.214;VQSLOD=5.0154;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:90.29:0,90,1641	0/0:14,0:14:42.14:0,42,782	0/0:26,0:26:42.93:0,43,1189	0/0:18,0:18:51.17:0,51,936	0/0:29,0:29:84.27:0,84,1539	0/0:27,0:27:78.24:0,78,1414	0/0:16,0:16:45.14:0,45,801	0/0:30,0:30:84.29:0,84,1560	0/0:21,0:21:60.21:0,60,1123	1/1:1,36:37:99:1536,108,0	1/1:0,19:19:51.09:723,51,0	0/0:27,0:27:66.23:0,66,1233	0/0:12,0:12:36.12:0,36,673	0/0:7,0:7:21.07:0,21,393	0/0:28,0:28:81.25:0,81,1436	0/0:16,0:16:48.15:0,48,852	0/0:23,0:23:69.24:0,69,1271	0/0:29,0:29:81.26:0,81,1483	0/0:12,0:12:33.10:0,33,577	0/0:27,0:27:69.24:0,69,1276	0/0:21,0:21:60.14:0,60,1054	0/0:20,0:20:57.20:0,57,1055	0/0:14,0:14:42.14:0,42,785	0/0:9,0:9:27.09:0,27,497	0/0:25,0:25:75.26:0,75,1387	0/0:26,0:26:78.23:0,78,1417	0/0:23,0:23:66.23:0,66,1219	0/0:18,0:18:54.19:0,54,1010
chr10	65439595	.	A	ATTCACG	35170.92	PASS	AB=0.947;AC=41;AF=0.732;AN=56;BaseQRankSum=-7.740;DP=657;FS=6.929;HRun=0;HaplotypeScore=124.8257;InbreedingCoeff=0.9044;MQ=71.49;MQ0=0;MQRankSum=-16.545;QD=68.16;ReadPosRankSum=-0.205;VQSLOD=5.1896;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,27:41:96.33:3216,96,0	1/1:0,8:11:18.06:605,18,0	0/0:19,0:19:48.03:0,48,964	0/0:17,0:17:50.90:0,51,1089	0/0:29,0:29:81.23:0,81,1802	1/1:4,23:33:75.26:2449,75,0	1/1:4,13:23:45.15:1535,45,0	0/0:25,0:25:69.22:0,69,1498	0/0:22,0:22:66.20:0,66,1489	1/1:9,20:34:93.20:2825,93,0	1/1:1,22:26:54.19:1690,54,0	1/1:2,23:26:69.24:2383,69,0	0/1:17,1:18:53.35:53,0,1123	1/1:4,17:25:48.16:1674,48,0	1/1:9,26:38:78.27:2630,78,0	1/1:5,14:25:45.15:1575,45,0	1/1:3,11:21:30.10:1025,30,0	1/1:2,7:10:24.08:862,24,0	1/1:4,12:20:57.19:1769,57,0	1/1:5,21:28:63.22:2098,63,0	1/1:9,11:25:30:925,30,0	1/1:4,29:36:78.27:2443,78,0	0/0:14,0:14:42.09:0,42,820	0/0:15,0:15:45.15:0,45,1078	1/1:2,12:17:33.11:1103,33,0	1/1:2,18:23:66.17:2112,66,0	1/1:7,13:24:48.16:1670,48,0	1/1:1,5:11:15.05:530,15,0
chr10	65440820	.	T	TTA	1794.90	PASS	AB=0.700;AC=18;AF=0.321;AN=56;BaseQRankSum=10.965;DP=298;FS=95.878;HRun=0;HaplotypeScore=69.0309;InbreedingCoeff=-0.0893;MQ=51.15;MQ0=4;MQRankSum=-9.420;QD=13.81;ReadPosRankSum=-4.617;VQSLOD=-0.5092;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:10,3:13:48.29:48,0,275	0/1:1,4:5:33.90:136,0,34	0/0:18,0:6:14.96:0,15,215	0/0:18,0:10:27.09:0,27,423	0/0:14,0:14:42.14:0,42,685	0/1:4,9:13:18.84:328,0,19	0/1:5,2:7:52.17:52,0,223	0/0:16,0:16:42.14:0,42,665	0/0:12,0:12:33.11:0,33,538	0/0:24,0:24:72.23:0,72,1151	0/0:9,0:8:21.07:0,21,340	1/1:2,4:6:12.04:173,12,0	0/0:8,0:8:24.08:0,24,391	0/1:7,3:10:85.55:86,0,220	1/1:2,1:3:3.01:37,3,0	0/1:2,3:5:36.91:100,0,37	0/0:3,0:3:3.01:0,3,49	0/1:3,1:4:42.90:55,0,43	0/0:8,0:5:15.05:0,15,244	0/1:10,5:15:99:147,0,367	0/0:5,2:6:9.03:0,9,147	0/1:1,5:6:30.76:165,0,31	0/0:15,0:15:42.14:0,42,682	0/0:16,0:16:45.15:0,45,734	0/1:6,5:11:73.66:164,0,74	0/1:9,4:13:99:204,0,408	0/1:8,5:13:30.38:204,0,30	1/1:5,1:6:3.01:61,3,0
chr10	65440882	.	A	AAAG	1712.02	PASS	AB=0.732;AC=24;AF=0.444;AN=54;BaseQRankSum=-0.064;DP=318;FS=45.558;HRun=0;HaplotypeScore=55.6868;InbreedingCoeff=0.1758;MQ=55.88;MQ0=10;MQRankSum=-1.112;QD=8.65;ReadPosRankSum=2.740;VQSLOD=1.2604;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,13:21:19.19:316,19,0	0/1:4,1:5:14.51:18,0,15	0/0:19,0:6:11.11:0,11,90	0/0:15,0:8:11.86:0,12,105	0/0:19,0:19:46.62:0,47,341	0/1:2,8:10:11.56:89,0,12	0/1:7,0:6:2.72:42,0,3	0/1:22,0:16:32.25:32,0,89	0/0:9,0:9:6.26:0,6,23	0/0:10,0:10:22.17:0,22,190	0/0:9,0:8:20.67:0,21,178	1/1:0,6:6:5.99:75,6,0	0/0:9,0:9:17.79:0,18,159	1/1:7,0:7:14.92:136,15,0	0/1:5,4:9:39.17:39,0,44	1/1:3,5:7:6.44:166,6,0	1/1:3,16:20:10.61:258,11,0	0/1:3,5:6:5.90:45,0,6	0/0:5,0:4:2.74:0,3,12	0/1:4,6:10:11.10:95,0,11	1/1:6,0:5:5.79:33,6,0	./.	0/0:9,0:9:26.91:0,27,255	0/0:15,0:15:29.41:0,29,350	1/1:2,8:10:2.30:193,2,0	0/1:8,5:13:45.30:94,0,45	0/1:6,11:17:18.44:126,0,18	0/1:8,8:15:36.48:129,0,36
chr10	65440906	.	GGT	G	270.09	PASS	AB=0.888;AC=11;AF=0.196;AN=56;BaseQRankSum=4.080;DP=300;FS=28.755;HRun=0;HaplotypeScore=65.7630;InbreedingCoeff=-0.0978;MQ=70.01;MQ0=3;MQRankSum=-5.977;QD=2.78;ReadPosRankSum=0.817;VQSLOD=0.0962;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:16,1:16:19.18:0,19,652	0/1:5,0:5:15.95:16,0,51	0/1:18,1:12:7.88:8,0,347	0/0:23,0:16:27.36:0,27,426	0/0:15,0:15:45.08:0,45,751	0/1:3,1:4:40.72:41,0,50	0/0:7,1:8:18.06:0,18,341	0/0:23,0:22:57.19:0,57,1056	0/0:7,0:7:9.03:0,9,171	0/0:12,0:12:30.10:0,30,540	0/0:9,0:9:27.09:0,27,511	0/1:3,1:4:33.86:34,0,120	0/0:6,0:6:15.04:0,15,253	0/0:3,0:3:3.01:0,3,57	0/0:7,0:7:17.42:0,17,317	0/1:7,0:6:21.67:22,0,164	0/1:23,2:25:1.62:2,0,910	0/0:9,2:8:18.06:0,18,330	0/1:9,1:10:15.76:16,0,482	0/1:8,2:10:99:106,0,311	0/0:11,8:19:26.45:0,26,415	1/1:0,1:1:3.01:46,3,0	0/0:9,0:9:21.07:0,21,399	0/0:12,0:12:32.76:0,33,498	0/0:5,1:6:14.98:0,15,244	0/0:8,0:8:1.16:0,1,319	0/1:7,3:9:99:119,0,129	0/0:7,0:7:14.49:0,14,267
chr10	65440928	.	A	AGTGGTTAAGAGCACTG	1936.83	PASS	AB=0.845;AC=7;AF=0.125;AN=56;BaseQRankSum=3.719;DP=342;FS=27.957;HRun=0;HaplotypeScore=144.7077;InbreedingCoeff=0.0512;MQ=67.71;MQ0=8;MQRankSum=-3.679;QD=44.02;ReadPosRankSum=4.036;VQSLOD=1.1861;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:72.20:0,72,3073	0/0:2,0:2:6.02:0,6,293	0/0:22,0:13:32.33:0,32,1057	0/0:31,0:15:36.05:0,36,1248	0/0:15,0:15:45.15:0,45,1992	0/1:6,1:7:99:224,0,716	0/0:11,0:11:30.07:0,30,1170	0/0:32,0:32:90.27:0,90,4130	0/0:8,0:8:12.04:0,12,587	0/0:14,0:13:36.11:0,36,1547	0/0:9,0:9:27.09:0,27,1219	0/1:4,1:5:99:227,0,499	0/0:6,0:6:18.06:0,18,881	0/0:2,0:2:2.57:0,3,146	0/0:8,0:8:24.08:0,24,1045	0/0:3,0:3:9.03:0,9,439	0/0:34,0:33:86.33:0,86,3932	0/0:12,0:11:30.06:0,30,1272	0/1:9,1:10:99:212,0,1201	0/1:10,2:12:99:454,0,1144	0/0:17,0:17:42.09:0,42,1641	1/1:0,1:1:3.01:242,3,0	0/0:9,0:9:21.07:0,21,972	0/0:10,0:10:30.09:0,30,1267	0/0:4,0:4:12.04:0,12,586	0/0:9,0:8:24.08:0,24,1174	0/1:6,3:8:99:705,0,543	0/0:12,0:12:36.11:0,36,1512
chr10	65441070	.	TA	T	485.04	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=2.532;DP=318;FS=0.822;HRun=9;HaplotypeScore=41.6522;InbreedingCoeff=0.7692;MQ=59.15;MQ0=2;MQRankSum=0.710;QD=17.96;ReadPosRankSum=-0.756;VQSLOD=3.0643;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,1:20:23.70:0,24,527	0/0:3,0:3:9.03:0,9,104	0/0:6,0:5:12.03:0,12,127	0/0:5,0:3:8.92:0,9,83	0/0:15,0:15:39.12:0,39,450	0/0:15,0:15:42.12:0,42,485	0/0:5,0:4:12.04:0,12,138	0/0:8,0:27:57.01:0,57,296	0/0:3,0:3:9.03:0,9,104	1/1:0,17:17:48.03:439,48,0	1/1:2,8:10:18:165,18,0	0/0:13,0:13:33.10:0,33,380	0/0:6,0:6:18.05:0,18,208	0/0:4,0:4:9.03:0,9,104	0/0:8,0:7:21.06:0,21,242	0/0:17,0:15:42.12:0,42,485	0/0:20,0:20:54.16:0,54,621	0/0:18,0:18:39.10:0,39,439	0/0:12,0:10:24.07:0,24,277	0/0:11,0:11:33.10:0,33,381	0/0:6,0:6:18.05:0,18,208	0/0:1,0:1:3.01:0,3,35	0/0:7,0:7:12.03:0,12,130	0/0:5,0:5:15.04:0,15,173	0/0:8,0:8:24.06:0,24,269	0/0:17,0:16:39.12:0,39,450	0/0:23,0:22:54.14:0,54,611	0/0:15,0:15:36.11:0,36,415
chr10	65441134	.	T	TAA	7580.83	PASS	AB=1.000;AC=41;AF=0.732;AN=56;BaseQRankSum=-0.988;DP=403;FS=15.553;HRun=7;HaplotypeScore=80.4824;InbreedingCoeff=0.8409;MQ=84.78;MQ0=1;MQRankSum=-1.771;QD=25.19;ReadPosRankSum=1.817;VQSLOD=2.7813;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:19:36.02:510,36,0	1/1:8,0:8:24.02:298,24,0	0/0:39,0:16:29.82:0,30,310	0/1:44,0:27:28.62:29,0,185	0/0:10,0:10:27.06:0,27,303	1/1:6,0:6:15.03:200,15,0	1/1:13,2:15:41.59:496,42,0	1/1:23,0:23:44.79:455,45,0	1/1:5,0:5:2.94:18,3,0	0/0:15,0:16:23.93:0,24,267	0/0:5,0:5:12.02:0,12,134	1/1:20,0:20:47.94:651,48,0	0/0:12,0:12:24.03:0,24,268	1/1:11,1:12:30.08:404,30,0	1/1:6,1:6:18.06:272,18,0	1/1:23,1:23:68.69:876,69,0	1/1:17,0:17:32.76:392,33,0	1/1:15,0:15:29.80:344,30,0	1/1:3,9:12:36.02:478,36,0	1/1:17,1:18:45.11:650,45,0	1/1:4,0:4:12.02:153,12,0	1/1:3,0:3:6.02:84,6,0	0/0:13,0:13:21.03:0,21,244	0/0:7,0:7:15.03:0,15,165	1/1:11,0:11:24.04:357,24,0	1/1:11,1:12:27.08:354,27,0	1/1:18,1:17:32.56:386,33,0	1/1:7,0:7:14.86:177,15,0
chr10	65441149	.	GGGGA	G	4310.68	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=4.535;DP=366;FS=27.740;HRun=0;HaplotypeScore=80.3879;InbreedingCoeff=0.7753;MQ=87.17;MQ0=2;MQRankSum=-2.630;QD=20.93;ReadPosRankSum=5.124;VQSLOD=2.8866;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:22,1:23:24.03:298,24,0	1/1:9,0:9:15.05:201,15,0	0/0:51,0:24:44.24:0,44,856	0/0:40,0:22:7.11:0,7,348	0/0:7,0:7:12.01:0,12,156	1/1:10,0:10:3.01:32,3,0	1/1:18,1:19:35.78:501,36,0	0/0:26,0:26:72.07:0,72,818	0/0:1,0:1:3.01:0,3,57	0/0:9,0:9:18.01:0,18,318	0/0:5,0:5:3.01:0,3,50	1/1:20,1:21:41.87:571,42,0	0/0:8,0:8:21.07:0,21,478	1/1:8,1:9:21.07:304,21,0	1/1:5,0:4:3.01:46,3,0	1/1:18,2:19:48.11:638,48,0	1/1:13,2:15:30.05:413,30,0	1/1:12,1:13:21.07:292,21,0	1/1:9,1:10:20.48:192,20,0	1/1:12,1:13:17.98:230,18,0	1/1:6,0:6:3.01:40,3,0	1/1:2,0:2:3.01:37,3,0	0/0:9,0:9:17.80:0,18,372	0/0:4,0:4:12.04:0,12,258	1/1:5,0:5:5.98:47,6,0	1/1:9,1:10:18.04:203,18,0	1/1:12,1:11:20.98:255,21,0	1/1:3,0:2:2.60:10,3,0
chr10	65441150	.	GGGA	G	3492.95	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=4.850;DP=353;FS=32.514;HRun=0;HaplotypeScore=74.9876;InbreedingCoeff=0.7879;MQ=88.26;MQ0=2;MQRankSum=-3.282;QD=17.55;ReadPosRankSum=4.830;VQSLOD=1.4746;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:22,2:24:24.03:277,24,0	1/1:7,1:8:15.03:167,15,0	0/0:49,0:23:43.87:0,44,717	0/0:38,0:21:25.31:0,25,317	0/0:5,0:5:12:0,12,130	1/1:10,0:10:3:26,3,0	1/1:18,1:19:36.20:411,36,0	0/0:27,0:27:74.79:0,75,711	0/0:1,0:1:3.01:0,3,43	0/0:8,0:8:18:0,18,263	0/0:5,0:5:2.99:0,3,39	1/1:21,0:21:41.53:431,42,0	0/0:8,0:8:21.06:0,21,386	1/1:9,0:9:21.05:222,21,0	1/1:5,0:4:3.01:33,3,0	1/1:19,1:19:48.10:523,48,0	1/1:14,0:14:30:312,30,0	1/1:12,0:12:21.04:217,21,0	1/1:8,0:8:20.40:160,20,0	1/1:11,0:11:20.37:181,20,0	1/1:6,0:6:3.01:44,3,0	1/1:2,0:2:3.01:31,3,0	0/0:9,0:9:17.63:0,18,305	0/0:4,0:4:12.03:0,12,207	1/1:4,0:4:5.98:47,6,0	1/1:10,0:10:18:162,18,0	1/1:13,0:11:21.03:210,21,0	1/1:3,0:2:3.01:38,3,0
chr10	65441151	.	GGA	G	3925.62	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=5.336;DP=347;FS=33.994;HRun=0;HaplotypeScore=67.0840;InbreedingCoeff=0.7900;MQ=87.74;MQ0=2;MQRankSum=-1.972;QD=20.34;ReadPosRankSum=4.942;VQSLOD=2.0117;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,19:24:24:269,24,0	1/1:1,6:7:15.03:174,15,0	0/0:46,1:23:42.86:0,43,567	0/0:36,1:21:21.37:0,21,279	0/0:5,0:5:11.84:0,12,105	1/1:1,9:10:3.01:41,3,0	1/1:4,15:19:38.28:433,38,0	0/0:30,0:30:79.24:0,79,642	0/0:1,0:1:3.01:0,3,31	0/0:8,0:8:17.99:0,18,211	0/0:5,0:5:2.97:0,3,25	1/1:2,19:21:41.42:491,41,0	0/0:8,0:8:24.05:0,24,334	1/1:2,7:9:21.07:276,21,0	1/1:1,2:2:3.01:39,3,0	1/1:6,13:18:48.10:583,48,0	1/1:2,12:14:29.99:330,30,0	1/1:2,10:12:21.04:263,21,0	1/1:7,1:8:21.59:175,22,0	1/1:2,7:9:20.36:209,20,0	1/1:6,0:6:3.01:32,3,0	1/1:0,2:2:3.01:40,3,0	0/0:8,0:8:17.63:0,18,242	0/0:5,0:5:14.83:0,15,183	1/1:4,0:4:5.98:47,6,0	1/1:3,6:9:18.02:209,18,0	1/1:3,10:11:21.07:274,21,0	1/1:4,0:3:3.01:40,3,0
chr10	65441152	.	GA	G	1940.57	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=6.249;DP=329;FS=29.021;HRun=1;HaplotypeScore=65.0875;InbreedingCoeff=0.7613;MQ=87.46;MQ0=2;MQRankSum=-2.913;QD=10.66;ReadPosRankSum=5.583;VQSLOD=-0.1951;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:22:23.71:158,24,0	1/1:7,0:7:14.57:89,15,0	0/0:43,0:20:32.84:0,33,431	0/0:34,0:20:23.38:0,23,262	0/0:5,0:5:5.36:0,5,72	1/1:9,0:9:2.97:20,3,0	1/1:18,0:18:35.39:226,35,0	0/0:29,0:29:83.92:0,84,747	0/0:1,0:1:2.96:0,3,19	0/0:9,0:9:20.92:0,21,189	0/0:4,0:4:3:0,3,25	1/1:21,0:21:38.83:241,39,0	0/0:8,0:8:24.05:0,24,264	1/1:8,0:8:20.71:137,21,0	1/1:2,0:1:2.96:19,3,0	1/1:17,2:18:47.35:330,47,0	1/1:14,0:14:29.58:192,30,0	1/1:11,0:11:20.69:135,21,0	1/1:7,0:7:15.76:107,16,0	1/1:8,0:8:17.73:114,18,0	1/1:0,6:6:2.96:19,3,0	1/1:2,0:2:2.97:20,3,0	0/0:7,0:7:17.61:0,18,178	0/0:5,0:5:5.80:0,6,127	1/1:4,0:4:5.98:47,6,0	1/1:7,0:7:17.79:122,18,0	1/1:13,0:11:20.75:139,21,0	1/1:0,4:3:2.99:23,3,0
chr10	65441335	.	AT	A	13114.92	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=10.151;DP=522;FS=13.559;HRun=3;HaplotypeScore=55.1282;InbreedingCoeff=0.9968;MQ=76.28;MQ0=0;MQRankSum=-4.771;QD=34.88;ReadPosRankSum=1.461;VQSLOD=4.1645;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,31:31:93.29:1153,93,0	1/1:0,5:5:15.05:186,15,0	0/0:17,0:17:43.95:0,44,575	0/0:12,0:12:24.96:0,25,335	0/0:15,0:15:45.15:0,45,648	1/1:0,16:16:48.15:595,48,0	1/1:1,18:19:51.14:632,51,0	1/1:1,38:39:99:1401,114,0	0/0:18,0:18:54.18:0,54,778	0/0:24,0:24:72.24:0,72,1037	0/0:12,0:12:36.10:0,36,498	1/1:2,23:25:63.20:781,63,0	0/0:26,0:26:78.26:0,78,1120	1/1:0,20:20:57.18:707,57,0	1/1:0,16:16:42.13:521,42,0	1/1:0,26:26:75.24:930,75,0	1/1:0,20:20:54.17:670,54,0	1/1:1,17:18:48.15:595,48,0	1/1:0,22:22:66.18:794,66,0	1/1:1,17:18:51.16:632,51,0	1/1:0,18:18:48.15:595,48,0	1/1:0,8:8:24.08:298,24,0	0/0:11,0:11:33.10:0,33,457	0/0:11,0:11:30.10:0,30,432	1/1:0,13:13:36.11:446,36,0	1/1:0,16:16:48.13:582,48,0	1/1:1,24:25:66.21:818,66,0	1/1:0,21:21:63.20:781,63,0
chr10	65441460	.	GA	G	6619.85	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=15.010;DP=461;FS=2.772;HRun=10;HaplotypeScore=66.5503;InbreedingCoeff=0.9817;MQ=67.03;MQ0=0;MQRankSum=-0.485;QD=21.78;ReadPosRankSum=3.418;VQSLOD=5.8835;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,22:23:53.99:469,54,0	1/1:1,7:8:20.99:182,21,0	0/0:5,0:5:9.02:0,9,97	0/0:6,0:5:12.01:0,12,132	0/0:14,0:14:30.08:0,30,328	1/1:1,31:32:92.98:807,93,0	1/1:2,13:15:38.99:339,39,0	0/0:33,0:33:87.20:0,87,939	0/0:12,0:12:30.07:0,30,323	0/0:22,0:22:60.16:0,60,656	0/0:8,0:8:24.02:0,24,252	1/1:1,11:12:26.99:234,27,0	0/0:25,0:25:72.19:0,72,796	1/1:1,18:19:41.99:365,42,0	1/1:4,14:18:41.98:365,42,0	1/1:2,8:10:17.99:156,18,0	1/1:3,23:26:65.98:573,66,0	1/1:1,19:20:50.99:443,51,0	1/1:3,15:18:44.98:391,45,0	1/1:0,13:13:35.98:312,36,0	1/1:1,22:23:59.99:521,60,0	1/1:0,11:11:29.99:259,30,0	0/0:15,0:15:45.11:0,45,488	0/0:17,0:17:48.13:0,48,531	1/1:0,7:7:18:156,18,0	1/1:3,19:23:56.01:475,56,0	1/1:3,17:20:47.98:417,48,0	1/1:0,6:6:18:156,18,0
chr10	65441590	.	C	CT	7299.06	PASS	AB=0.625;AC=37;AF=0.661;AN=56;BaseQRankSum=3.214;DP=484;FS=6.484;HRun=9;HaplotypeScore=60.4613;InbreedingCoeff=0.8506;MQ=73.71;MQ0=2;MQRankSum=-2.904;QD=22.53;ReadPosRankSum=3.079;VQSLOD=5.7719;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,22:24:54.14:591,54,0	1/1:1,2:3:6.02:66,6,0	0/0:22,0:16:14.98:0,15,168	0/0:13,0:13:3.69:0,4,93	0/0:21,0:21:53.70:0,54,449	1/1:1,21:22:60.15:655,60,0	1/1:1,14:15:24.06:265,24,0	1/1:6,28:35:83.99:851,84,0	0/0:14,0:14:35.87:0,36,299	0/0:22,0:21:56.81:0,57,481	0/0:15,0:15:44.98:0,45,388	1/1:1,22:23:60.16:660,60,0	0/0:22,0:22:59.95:0,60,515	1/1:1,7:8:21.06:232,21,0	1/1:3,21:24:28.17:534,28,0	0/1:4,6:10:10.52:118,0,11	1/1:2,21:24:45.10:486,45,0	1/1:4,22:26:54.11:583,54,0	1/1:5,17:22:48.06:489,48,0	1/1:3,7:10:14.97:150,15,0	1/1:4,13:18:24.06:263,24,0	1/1:1,9:10:26.92:267,27,0	0/0:12,0:12:35.92:0,36,301	0/0:19,0:19:47.99:0,48,417	1/1:0,12:12:30.08:328,30,0	1/1:3,14:18:31.28:418,31,0	1/1:4,10:14:4.24:243,4,0	1/1:3,3:6:9.02:100,9,0
chr10	65441730	.	TG	T	5829	PASS	AB=0.826;AC=37;AF=0.661;AN=56;BaseQRankSum=11.643;DP=391;FS=27.001;HRun=5;HaplotypeScore=82.7879;InbreedingCoeff=0.9079;MQ=62.87;MQ0=1;MQRankSum=-9.994;QD=22.77;ReadPosRankSum=0.601;VQSLOD=3.0951;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,9:12:27.07:303,27,0	1/1:0,5:5:12.03:134,12,0	0/0:14,0:13:27.83:0,28,366	0/0:19,0:16:41:0,41,471	0/0:15,0:15:33.11:0,33,450	1/1:3,7:10:18.05:202,18,0	1/1:5,9:14:24.06:265,24,0	0/1:15,4:18:35.60:36,0,276	0/0:19,0:19:51.16:0,51,680	0/0:14,0:14:36.12:0,36,492	0/0:10,0:10:27.09:0,27,368	1/1:2,12:13:32.83:345,33,0	0/0:15,0:15:45.14:0,45,602	1/1:1,12:13:30.08:336,30,0	1/1:1,11:12:30.08:332,30,0	1/1:2,18:19:45.12:500,45,0	1/1:6,13:19:33.07:359,33,0	1/1:4,9:12:27.07:301,27,0	1/1:3,10:13:33.09:365,33,0	1/1:8,11:19:42.06:447,42,0	1/1:6,13:19:33.01:343,33,0	1/1:0,5:5:15.04:166,15,0	0/0:12,0:12:30.10:0,30,409	0/0:17,0:17:45.13:0,45,593	1/1:0,18:18:51.14:573,51,0	1/1:4,13:17:39.09:425,39,0	1/1:3,6:9:21.06:235,21,0	1/1:1,4:5:15.04:162,15,0
chr10	65441807	.	GGGA	G	2012.56	PASS	AB=0.966;AC=22;AF=0.423;AN=52;BaseQRankSum=0.437;DP=270;FS=20.190;HRun=0;HaplotypeScore=56.3653;InbreedingCoeff=0.4154;MQ=74.45;MQ0=0;MQRankSum=-2.399;QD=16.63;ReadPosRankSum=-5.187;VQSLOD=0.4881;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,1:16:23.96:318,24,0	./.	0/0:9,0:9:27.05:0,27,410	0/0:19,0:16:41.73:0,42,809	0/0:14,0:14:39.13:0,39,851	1/1:5,2:7:14.82:192,15,0	0/1:16,0:16:16.87:209,0,17	0/0:10,0:10:23.98:0,24,253	0/0:15,0:15:45.14:0,45,1003	0/0:9,0:9:23.56:0,24,327	0/0:5,0:5:0:0,0,0	1/1:3,0:3:5.93:67,6,0	0/0:23,0:23:69.22:0,69,1595	0/0:2,0:2:2.94:0,3,18	0/1:6,1:7:16.50:110,0,16	0/1:5,0:5:25.30:59,0,25	0/1:11,1:11:4.47:194,0,4	0/1:9,0:8:17.79:181,0,18	0/1:10,0:9:22.43:191,0,22	1/1:6,1:7:14.95:179,15,0	1/1:14,2:14:23.02:303,23,0	./.	0/0:18,0:18:51.17:0,51,1147	0/0:21,0:21:63.22:0,63,1516	1/1:1,4:5:6.01:63,6,0	1/1:0,6:6:6.02:105,6,0	0/0:3,0:3:8.57:0,9,62	1/1:2,0:2:2.98:21,3,0
chr10	65441808	.	G	GT	934.40	PASS	AB=0.940;AC=26;AF=0.500;AN=52;BaseQRankSum=6.349;DP=270;FS=11.980;HRun=0;HaplotypeScore=55.0886;InbreedingCoeff=0.4162;MQ=76.03;MQ0=0;MQRankSum=-4.382;QD=7.48;ReadPosRankSum=-4.768;VQSLOD=0.9022;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:15:19.09:118,19,0	./.	0/0:9,0:9:9.22:0,9,173	0/0:20,0:17:42.04:0,42,485	0/0:14,0:14:38.85:0,39,491	1/1:7,0:7:13.73:89,14,0	0/1:15,1:16:8.39:136,0,8	0/0:11,0:11:20.16:0,20,154	0/0:14,0:14:42.12:0,42,554	0/0:9,0:9:23.18:0,23,204	0/0:5,0:5:0:0,0,0	1/1:2,1:3:5.61:47,6,0	0/0:23,0:23:66.22:0,66,915	1/1:1,0:1:0.89:2,1,0	0/1:7,0:7:20.68:52,0,21	0/1:5,0:5:17.50:17,0,27	0/1:9,3:11:13.32:121,0,13	0/1:8,1:8:1.47:95,0,1	1/1:9,1:9:17.13:118,17,0	1/1:7,0:7:2.86:62,3,0	1/1:15,2:15:15.26:134,15,0	./.	0/0:18,0:18:51.14:0,51,669	0/0:21,0:21:63.17:0,63,859	1/1:4,1:5:5.92:43,6,0	1/1:6,0:6:5.28:33,5,0	0/1:3,0:3:19.05:19,0,28	1/1:0,2:2:2.99:23,3,0
chr10	65441815	.	T	TG	1293.26	PASS	AB=0.766;AC=13;AF=0.241;AN=54;BaseQRankSum=9.078;DP=344;FS=95.731;HRun=3;HaplotypeScore=83.2370;InbreedingCoeff=-0.2030;MQ=69.12;MQ0=1;MQRankSum=-8.968;QD=8.13;ReadPosRankSum=3.217;VQSLOD=-0.7401;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:16,4:20:99:129,0,285	0/0:1,0:1:3.01:0,3,36	0/0:10,0:10:22.94:0,23,184	0/0:22,0:19:11.76:0,12,478	0/0:16,0:16:39.12:0,39,464	0/1:6,4:9:98.62:99,0,186	0/1:14,6:20:99:161,0,346	0/0:13,0:13:36.11:0,36,432	0/0:16,0:16:45.14:0,45,540	0/0:16,0:16:45.09:0,45,513	0/0:5,0:5:3.01:0,3,36	0/1:3,10:12:41.80:305,0,42	0/0:20,0:20:60.18:0,60,720	1/1:1,3:3:6.02:84,6,0	0/1:8,6:14:99:179,0,150	0/1:5,3:7:68.75:69,0,93	0/1:12,3:15:83.53:84,0,353	0/0:10,1:9:24.01:0,24,259	0/1:9,2:11:59.86:60,0,192	0/1:6,1:7:23.82:24,0,162	0/1:17,8:24:99:197,0,353	./.	0/0:16,0:16:36.11:0,36,432	0/0:23,0:23:66.15:0,66,764	0/0:6,0:6:6.02:0,6,72	0/1:9,3:11:53.75:54,0,237	0/0:3,1:4:2.99:0,3,33	0/0:4,0:4:9.03:0,9,108
chr10	65441822	.	GAA	G	1466.51	PASS	AB=0.757;AC=12;AF=0.214;AN=56;BaseQRankSum=9.986;DP=361;FS=117.544;HRun=3;HaplotypeScore=84.6934;InbreedingCoeff=-0.3092;MQ=62.02;MQ0=2;MQRankSum=-9.384;QD=8.53;ReadPosRankSum=5.662;VQSLOD=-0.5788;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:17,4:21:99:129,0,680	0/0:2,0:2:6.02:0,6,116	0/0:8,0:7:5.89:0,6,208	0/0:20,0:19:50.90:0,51,875	0/0:16,0:16:39.13:0,39,753	0/1:9,4:12:99:104,0,412	0/1:12,6:18:99:223,0,586	0/0:17,0:16:48.16:0,48,926	0/0:16,0:16:48.16:0,48,927	0/0:16,0:16:42.14:0,42,811	0/0:4,0:4:6.02:0,6,116	0/1:4,10:13:99:332,0,140	0/0:19,0:19:57.15:0,57,1020	0/1:1,3:3:48.74:82,0,49	0/1:11,6:17:99:180,0,550	0/1:4,3:6:76.40:76,0,159	0/1:16,3:19:83.04:83,0,780	0/0:13,1:12:36.10:0,36,658	0/1:10,3:13:99:105,0,430	0/1:6,1:7:27.66:28,0,271	0/1:17,8:24:99:214,0,713	0/0:2,1:3:6.02:0,6,116	0/0:15,0:15:39.13:0,39,736	0/0:26,0:26:78.25:0,78,1467	0/0:6,0:6:9.03:0,9,174	0/1:11,3:13:58.52:59,0,482	0/0:2,1:3:5.99:0,6,79	0/0:4,0:4:9.03:0,9,174
chr10	65441972	.	T	TAATA	18962.86	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=-7.274;DP=484;FS=23.422;HRun=0;HaplotypeScore=85.8733;InbreedingCoeff=0.9029;MQ=55.25;MQ0=3;MQRankSum=-6.152;QD=50.70;ReadPosRankSum=1.410;VQSLOD=3.5550;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,32:41:87.30:2292,87,0	1/1:0,3:3:9.03:237,9,0	0/0:16,0:10:5.29:0,5,408	0/0:10,0:8:0.56:0,1,135	0/0:25,0:25:54.17:0,54,947	1/1:3,11:17:33.11:867,33,0	1/1:4,12:16:33.11:866,33,0	1/1:17,6:21:27.06:557,27,0	0/0:14,0:14:36.11:0,36,627	1/1:4,11:15:33.11:870,33,0	1/1:8,4:12:27.09:636,27,0	1/1:3,11:14:30.10:792,30,0	0/0:13,0:13:33.10:0,33,568	1/1:4,12:17:33.11:847,33,0	1/1:4,18:24:57.20:1465,57,0	1/1:4,11:15:27.09:689,27,0	1/1:4,27:32:78.27:2055,78,0	1/1:4,17:21:36.12:924,36,0	1/1:4,13:16:39.12:892,39,0	1/1:2,4:11:12.86:364,13,0	1/1:6,8:15:12.04:275,12,0	1/1:1,5:6:12.04:317,12,0	0/0:16,0:16:36.11:0,36,622	0/0:16,0:16:42.14:0,42,765	1/1:3,12:18:38.16:859,38,0	1/1:6,20:27:60.19:1451,60,0	1/1:4,15:22:54.16:1321,54,0	1/1:2,4:6:18.06:386,18,0
chr10	65441983	.	T	TA	713.22	PASS	AB=0.972;AC=9;AF=0.161;AN=56;BaseQRankSum=-2.625;DP=479;FS=0.609;HRun=12;HaplotypeScore=114.2206;InbreedingCoeff=0.5718;MQ=60.51;MQ0=3;MQRankSum=-2.565;QD=7.51;ReadPosRankSum=-4.694;VQSLOD=1.4688;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:96.18:0,96,670	0/0:4,0:4:11.92:0,12,86	0/1:22,0:13:5.55:6,0,58	0/1:10,0:8:10.09:10,0,53	0/0:20,0:21:43.73:0,44,310	0/0:16,1:17:3.62:0,4,189	0/0:12,0:13:34.82:0,35,244	1/1:7,16:21:17.15:326,17,0	0/0:17,0:18:48.58:0,49,320	1/1:7,11:18:11.20:270,11,0	1/1:2,9:11:26.96:244,27,0	0/0:13,0:13:32.79:0,33,240	0/0:12,0:14:33.81:0,34,225	0/0:14,1:15:5.61:0,6,185	0/0:25,0:25:56.52:0,57,405	0/0:9,0:10:19.93:0,20,137	0/0:32,0:32:74:0,74,530	0/0:15,0:15:28.06:0,28,197	0/0:19,1:17:12.12:0,12,252	0/0:10,0:10:13.42:0,13,156	0/1:10,1:11:3.99:4,0,108	0/0:6,0:6:14.90:0,15,109	0/0:15,0:16:32.67:0,33,208	0/0:17,0:17:45.68:0,46,319	0/0:18,0:19:39.53:0,40,253	0/0:26,0:26:39.32:0,39,319	0/0:22,0:23:50.74:0,51,347	0/0:6,0:6:14.86:0,15,106
chr10	65442207	.	TC	T	1650.25	PASS	AB=0.974;AC=25;AF=0.446;AN=56;BaseQRankSum=6.296;DP=501;FS=4.648;HRun=1;HaplotypeScore=79.4727;InbreedingCoeff=0.1672;MQ=74.79;MQ0=3;MQRankSum=-1.293;QD=5.65;ReadPosRankSum=7.304;VQSLOD=0.6331;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:21:10.35:114,10,0	0/1:5,0:5:16.31:16,0,36	0/0:45,0:16:17.13:0,17,192	0/0:37,2:24:2.67:0,3,133	0/0:14,0:14:30.09:0,30,422	1/1:15,0:15:3.73:82,4,0	0/1:10,0:10:8.83:19,0,9	0/0:16,0:17:7.78:0,8,202	0/0:13,0:13:39.10:0,39,524	0/0:24,1:25:43.57:0,44,665	0/0:15,0:15:37.90:0,38,365	1/1:13,0:13:27.58:129,28,0	0/0:12,0:12:36.08:0,36,456	0/1:15,0:15:17.48:109,0,17	0/1:12,0:12:22.84:64,0,23	1/1:21,1:22:34.43:187,34,0	0/1:14,3:17:44.59:141,0,45	0/1:21,0:21:21.08:90,0,21	0/1:22,0:22:68.97:69,0,101	1/1:17,1:18:19.58:151,20,0	1/1:6,1:7:11.44:40,11,0	0/1:4,0:4:15.33:25,0,15	0/0:15,0:15:45.09:0,45,614	0/0:13,0:13:16.87:0,17,464	0/1:22,1:23:0.02:116,0,0	0/1:22,1:23:19.41:137,0,19	1/1:23,1:24:3.77:225,4,0	0/1:19,1:19:20.24:122,0,20
chr10	65442208	.	CT	C	6465.84	PASS	AB=1.000;AC=39;AF=0.696;AN=56;BaseQRankSum=0.115;DP=505;FS=14.392;HRun=6;HaplotypeScore=66.1482;InbreedingCoeff=0.9269;MQ=76.90;MQ0=3;MQRankSum=0.708;QD=19.42;ReadPosRankSum=3.810;VQSLOD=3.3783;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,20:23:45.07:469,45,0	1/1:2,3:5:9.02:97,9,0	0/0:50,0:19:25.53:0,26,242	0/0:41,0:25:18.30:0,18,146	0/0:14,0:14:30.03:0,30,359	1/1:1,14:15:30.08:321,30,0	1/1:1,9:10:12.03:129,12,0	1/1:16,0:17:27.88:92,28,0	0/0:14,0:14:33.08:0,33,404	0/1:24,0:24:0.26:0,0,75	0/0:14,0:14:15.02:0,15,132	1/1:0,13:13:33.08:352,33,0	0/0:11,0:11:30.09:0,30,380	1/1:1,13:14:30.08:320,30,0	1/1:3,9:12:27.02:277,27,0	1/1:4,18:22:51.05:515,51,0	1/1:8,9:17:38.86:386,39,0	1/1:4,17:21:35.99:351,36,0	1/1:7,15:22:50.30:496,50,0	1/1:1,17:18:45:454,45,0	1/1:1,6:7:15.04:161,15,0	1/1:1,3:4:8.98:84,9,0	0/0:15,0:15:40.67:0,41,503	0/0:12,0:12:31.34:0,31,397	1/1:3,20:23:45.10:476,45,0	1/1:4,18:22:60:586,60,0	1/1:3,21:24:54.13:576,54,0	1/1:5,15:19:32.77:323,33,0
chr10	65442211	.	T	TA	196.15	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.044;DP=519;FS=5.324;HRun=0;HaplotypeScore=94.5820;InbreedingCoeff=0.8713;MQ=77.44;MQ0=5;MQRankSum=-2.524;QD=15.09;ReadPosRankSum=-1.597;VQSLOD=5.0533;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:51.75:0,52,291	0/0:4,0:4:11.52:0,12,68	0/0:61,0:25:19.78:0,20,300	0/0:45,0:27:16.17:0,16,174	0/0:15,0:15:36.10:0,36,472	0/0:15,0:15:31.41:0,31,164	0/0:11,0:11:17.36:0,17,105	1/1:6,6:13:27.08:290,27,0	0/0:14,0:14:42.08:0,42,532	0/0:24,0:24:64.75:0,65,813	0/0:15,0:15:39.08:0,39,492	0/0:13,0:13:31.28:0,31,153	0/0:11,0:11:30.10:0,30,419	0/0:13,0:13:28.41:0,28,139	0/0:12,0:12:31.73:0,32,190	0/0:22,0:22:48.78:0,49,264	0/0:16,0:16:46.29:0,46,278	0/0:21,0:21:40.51:0,41,241	0/0:19,0:19:54.92:0,55,338	0/0:20,0:20:51.94:0,52,307	0/0:7,0:7:14.20:0,14,69	0/0:4,0:4:8.68:0,9,54	0/0:16,0:16:45.14:0,45,610	0/0:13,0:13:36.12:0,36,500	0/0:23,0:23:45.73:0,46,235	0/0:25,0:25:66.60:0,67,408	0/0:23,0:23:52.05:0,52,252	0/0:20,0:19:40.42:0,40,251
chr10	65442213	.	TTA	T	579.50	PASS	AB=0.978;AC=18;AF=0.321;AN=56;BaseQRankSum=1.015;DP=520;FS=2.462;HRun=0;HaplotypeScore=98.2308;InbreedingCoeff=0.1725;MQ=76.87;MQ0=7;MQRankSum=1.319;QD=2.52;ReadPosRankSum=-0.782;VQSLOD=1.8164;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:23:12.44:12,0,75	0/1:3,0:3:0:1,0,0	0/0:65,0:25:39.38:0,39,412	0/0:46,1:27:20.65:0,21,258	0/0:15,0:15:36.05:0,36,578	0/0:16,0:16:2.42:0,2,45	0/0:12,0:12:7.32:0,7,65	0/0:13,0:13:16.17:0,16,71	0/0:13,0:13:39.09:0,39,648	0/0:22,0:22:24.43:0,24,258	0/0:14,0:14:22.34:0,22,226	0/1:13,0:13:0.50:3,0,0	0/0:11,0:11:33.09:0,33,582	1/1:13,0:13:2.94:21,3,0	0/1:10,0:10:0.46:2,0,0	1/1:19,3:22:6.29:148,6,0	0/1:13,1:14:23.66:77,0,24	0/1:20,2:22:28.11:99,0,28	1/1:16,2:18:4.42:157,4,0	0/1:20,0:20:19.71:20,0,79	0/0:8,0:8:0.98:0,1,22	1/1:3,0:3:2.89:20,3,0	0/0:15,0:15:45.02:0,45,778	0/0:14,0:14:41.97:0,42,690	0/0:25,0:25:7.81:0,8,96	0/1:24,2:26:99:110,0,109	0/1:26,0:26:13.22:19,0,13	0/1:17,0:16:9.80:41,0,10
chr10	65442214	.	TA	T	1606.07	PASS	AB=0.961;AC=30;AF=0.536;AN=56;BaseQRankSum=3.738;DP=534;FS=7.311;HRun=11;HaplotypeScore=90.4745;InbreedingCoeff=0.3154;MQ=76.20;MQ0=7;MQRankSum=1.001;QD=4.87;ReadPosRankSum=9.169;VQSLOD=0.2959;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:23:33.24:70,0,33	1/1:3,0:3:6.26:20,6,0	0/0:65,0:25:25.84:0,26,235	0/0:45,1:27:17.18:0,17,134	0/0:16,0:16:28.31:0,28,283	0/1:16,0:16:20.02:50,0,20	0/1:12,0:12:9.35:9,0,50	0/0:20,0:22:62.81:0,63,338	0/0:14,0:14:34.95:0,35,341	1/1:3,19:22:53.91:439,54,0	0/1:5,9:14:0.12:142,0,0	1/1:13,0:13:24.25:83,24,0	0/0:11,0:11:30.06:0,30,309	1/1:13,0:13:23.65:91,24,0	1/1:10,0:10:15.18:46,15,0	1/1:22,0:22:37.46:147,37,0	1/1:14,0:14:9.56:95,10,0	0/1:22,0:22:10.38:71,0,10	0/1:18,0:18:2.65:56,0,3	0/1:20,0:20:35.47:73,0,35	0/1:8,0:8:10.46:20,0,10	1/1:3,0:3:4.90:18,5,0	0/0:15,0:15:19.08:0,19,381	0/0:13,1:14:17.35:0,17,356	0/1:26,0:26:65.02:65,0,74	0/1:27,0:27:82.15:82,0,95	1/1:26,0:26:28.26:142,28,0	1/1:17,1:17:15.33:81,15,0
chr10	65442233	.	GA	G	541.53	PASS	AB=0.902;AC=5;AF=0.089;AN=56;BaseQRankSum=0.769;DP=558;FS=8.198;HRun=11;HaplotypeScore=96.3006;InbreedingCoeff=0.3007;MQ=74.14;MQ0=5;MQRankSum=-3.906;QD=6.22;ReadPosRankSum=-2.097;VQSLOD=1.4588;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:57.10:0,57,595	0/0:5,0:5:15.03:0,15,153	0/0:53,0:28:17.33:0,17,253	0/0:38,2:21:1.55:0,2,81	0/0:15,2:17:30.07:0,30,318	0/0:13,1:15:35.92:0,36,360	0/0:10,0:11:20.92:0,21,206	1/1:6,22:29:70.91:566,71,0	0/0:11,1:13:11.26:0,11,300	0/1:22,1:23:2.70:3,0,367	0/0:11,0:11:33.08:0,33,352	0/1:17,2:19:48.30:48,0,301	0/0:14,1:16:14.31:0,14,340	0/1:13,3:16:40.84:41,0,216	0/0:14,0:15:32.92:0,33,334	0/0:19,0:19:36.55:0,37,379	0/0:13,0:13:30.03:0,30,297	0/0:22,1:23:32.46:0,32,532	0/0:23,1:24:35.49:0,35,576	0/0:18,0:19:53.41:0,53,516	0/0:12,0:12:27.04:0,27,272	0/0:6,0:6:18:0,18,180	0/0:17,0:17:30.07:0,30,314	0/0:15,0:15:39.07:0,39,406	0/0:29,2:30:13.80:0,14,539	0/0:23,2:24:7.86:0,8,483	0/0:26,1:27:41.46:0,41,611	0/0:16,1:16:45.07:0,45,462
chr10	65444746	.	T	TTG	19360.26	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-12.473;DP=603;FS=15.759;HRun=0;HaplotypeScore=60.5107;InbreedingCoeff=0.9886;MQ=68.23;MQ0=2;MQRankSum=-1.004;QD=43.90;ReadPosRankSum=2.295;VQSLOD=5.1925;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,26:28:57.20:1060,57,0	1/1:0,16:18:48.08:835,48,0	0/0:14,0:14:28.42:0,28,459	0/0:10,0:10:8.43:0,8,171	0/0:25,0:25:74.57:0,75,963	1/1:0,30:31:72.25:1340,72,0	1/1:0,14:14:30.10:558,30,0	1/1:1,0:29:84.10:948,84,0	0/0:19,0:19:57.16:0,57,762	0/0:22,0:22:66.19:0,66,906	0/0:13,0:13:39.12:0,39,542	1/1:0,18:21:51.17:943,51,0	0/0:26,0:26:75.21:0,75,1035	1/1:1,17:18:45.14:783,45,0	1/1:0,24:24:66.23:1228,66,0	1/1:0,27:28:66.23:1229,66,0	1/1:0,32:32:69.24:1282,69,0	1/1:0,27:27:66.16:1186,66,0	1/1:1,8:10:27.04:369,27,0	1/1:1,41:42:99:2024,114,0	1/1:1,17:20:54.18:978,54,0	1/1:0,21:23:69.11:1189,69,0	0/0:20,0:20:60.16:0,60,818	0/0:13,0:13:39.09:0,39,504	1/1:0,25:26:63.22:1173,63,0	1/1:0,12:12:36.08:568,36,0	1/1:0,27:27:69.24:1277,69,0	1/1:0,8:9:21.07:391,21,0
chr10	65444895	.	G	GC	18811.32	PASS	AB=0.522;AC=37;AF=0.661;AN=56;BaseQRankSum=17.607;DP=649;FS=9.377;HRun=0;HaplotypeScore=115.7083;InbreedingCoeff=0.9228;MQ=89.15;MQ0=1;MQRankSum=-3.132;QD=41.71;ReadPosRankSum=3.438;VQSLOD=4.0147;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,42:44:99:1867,117,0	1/1:0,8:8:15.05:239,15,0	0/0:26,0:26:71.80:0,72,919	0/0:23,0:23:66.21:0,66,892	0/0:21,0:21:63.19:0,63,862	1/1:0,23:23:63.21:1006,63,0	1/1:2,19:21:54.18:862,54,0	1/1:0,32:32:96.22:1434,96,0	0/0:25,0:25:75.22:0,75,1013	0/0:23,0:23:66.20:0,66,873	0/0:14,0:14:36.12:0,36,502	1/1:1,20:21:54.18:862,54,0	0/0:19,0:19:57.19:0,57,795	1/1:0,13:13:33.11:527,33,0	1/1:3,33:38:99:1556,99,0	1/1:2,27:29:75.26:1198,75,0	1/1:1,37:38:99:1628,102,0	1/1:0,14:14:36.12:575,36,0	1/1:1,19:20:54.02:696,54,0	1/1:0,23:23:69.23:1090,69,0	1/1:2,28:30:78.27:1242,78,0	1/1:0,19:19:54.18:862,54,0	0/0:21,0:21:63.19:0,63,847	0/0:26,0:26:75.17:0,75,988	1/1:1,19:20:54.18:862,54,0	0/1:2,22:24:11.61:964,0,12	1/1:1,20:21:57.19:909,57,0	1/1:0,12:12:27.09:430,27,0
chr10	65445261	.	A	ATTTT	10428.02	PASS	AB=0.630;AC=41;AF=0.732;AN=56;BaseQRankSum=-3.046;DP=464;FS=45.749;HRun=11;HaplotypeScore=78.2741;InbreedingCoeff=0.8538;MQ=69.60;MQ0=1;MQRankSum=-3.672;QD=29.21;ReadPosRankSum=-2.278;VQSLOD=-0.3315;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,10:24:48.07:897,48,0	1/1:0,4:5:15.05:314,15,0	0/0:16,0:15:1.36:0,1,196	0/0:9,0:10:14.85:0,15,172	0/0:22,0:22:63.21:0,63,855	1/1:3,16:20:30.10:694,30,0	1/1:4,6:12:14.97:282,15,0	1/1:5,0:22:40.06:272,40,0	0/0:17,0:17:38.98:0,39,515	1/1:9,0:25:33.57:238,34,0	1/1:5,0:15:26.70:240,27,0	1/1:5,11:17:21.07:454,21,0	0/0:18,0:20:49.41:0,49,691	1/1:1,11:13:30.10:661,30,0	1/1:4,11:17:24.08:512,24,0	0/1:7,9:17:22.82:297,0,23	1/1:5,10:17:27.09:613,27,0	1/1:4,8:15:30.10:648,30,0	1/1:5,6:12:24.08:441,24,0	1/1:6,14:23:42.07:816,42,0	1/1:1,13:15:22.87:417,23,0	1/1:2,5:16:26.92:475,27,0	0/0:11,0:12:30.01:0,30,392	0/0:10,0:10:20.95:0,21,286	1/1:3,6:12:18.06:403,18,0	1/1:5,12:23:48.05:808,48,0	1/1:3,17:22:27.98:594,28,0	1/1:4,7:14:17.98:352,18,0
chr10	65446090	.	C	CT	1239.48	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-4.112;DP=448;FS=0.000;HRun=3;HaplotypeScore=46.9636;InbreedingCoeff=0.8532;MQ=64.04;MQ0=0;MQRankSum=1.135;QD=32.62;ReadPosRankSum=0.368;VQSLOD=3.3161;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:69.21:0,69,826	0/0:6,0:6:11.95:0,12,142	0/0:8,0:7:0.62:0,1,126	0/0:13,0:13:33.01:0,33,362	0/0:10,0:10:21.06:0,21,252	0/0:19,0:19:57.17:0,57,684	0/0:20,0:20:57.16:0,57,671	0/0:36,0:36:90.25:0,90,1052	0/0:9,0:9:21.03:0,21,228	1/1:2,23:25:72.22:982,72,0	1/1:1,12:13:27.09:378,27,0	0/0:14,0:14:39.12:0,39,468	0/0:8,0:8:21.04:0,21,252	0/0:14,0:14:42.13:0,42,504	0/0:17,0:17:51.16:0,51,610	0/0:17,0:17:45.14:0,45,540	0/0:31,0:31:90.25:0,90,1053	0/0:16,0:16:45.14:0,45,540	0/0:28,0:28:78.23:0,78,926	0/0:15,0:15:45.14:0,45,540	0/0:11,0:11:33.10:0,33,396	0/0:4,0:4:12.04:0,12,144	0/0:7,0:7:21.06:0,21,252	0/0:13,0:13:39.10:0,39,456	0/0:18,0:18:51.16:0,51,612	0/0:23,1:24:24.18:0,24,713	0/0:15,0:15:39.12:0,39,465	0/0:13,0:13:36.08:0,36,417
chr10	65446622	.	A	AG	21473.79	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=-5.275;DP=674;FS=0.342;HRun=2;HaplotypeScore=71.1919;InbreedingCoeff=0.9993;MQ=60.37;MQ0=1;MQRankSum=0.924;QD=42.69;ReadPosRankSum=3.790;VQSLOD=4.4756;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,32:32:87.29:1371,87,0	1/1:0,11:10:27.09:431,27,0	0/0:39,0:32:96.25:0,96,1262	0/0:21,0:17:51.15:0,51,681	0/0:23,0:23:66.19:0,66,880	1/1:0,24:24:72.25:1150,72,0	1/1:0,33:33:93.32:1485,93,0	1/1:2,21:19:48.12:716,48,0	0/0:19,0:19:57.17:0,57,779	1/1:1,22:23:66.20:1026,66,0	1/1:0,15:15:36.12:575,36,0	1/1:0,30:30:84.29:1342,84,0	0/0:26,0:26:75.25:0,75,1045	1/1:0,26:26:75.25:1186,75,0	1/1:0,36:36:96.33:1535,96,0	1/1:0,29:29:75.26:1199,75,0	1/1:1,32:33:93.32:1487,93,0	1/1:1,21:22:60.20:951,60,0	1/1:0,20:20:60.18:933,60,0	1/1:0,9:9:24.08:383,24,0	1/1:2,52:54:99:2109,132,0	1/1:0,13:13:39.13:622,39,0	0/0:13,0:13:39.11:0,39,527	0/0:30,0:30:90.30:0,90,1257	1/1:0,15:15:45.15:719,45,0	1/1:0,18:18:51.17:816,51,0	1/1:1,24:25:60.20:959,60,0	1/1:0,11:11:30.10:479,30,0
chr10	65447491	.	AC	A	16796.89	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=11.679;DP=635;FS=0.317;HRun=2;HaplotypeScore=82.9519;InbreedingCoeff=0.9837;MQ=81.08;MQ0=0;MQRankSum=-5.075;QD=37.75;ReadPosRankSum=3.768;VQSLOD=5.3685;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,46:46:99:1804,129,0	1/1:1,10:11:27.09:366,27,0	0/0:27,0:27:78.20:0,78,1177	0/0:21,0:21:63.19:0,63,962	0/0:24,0:24:72.25:0,72,1148	1/1:0,22:22:63.21:881,63,0	1/1:0,30:30:81.27:1132,81,0	1/1:0,24:24:66.19:882,66,0	0/0:25,0:25:75.26:0,75,1198	0/0:16,0:16:48.16:0,48,749	0/0:13,0:13:36.12:0,36,573	1/1:0,21:21:60.20:839,60,0	0/0:23,0:23:66.18:0,66,1002	1/1:0,13:13:39.13:545,39,0	1/1:0,20:20:57.19:797,57,0	1/1:1,18:19:6.24:665,6,0	1/1:0,36:36:90.30:1258,90,0	1/1:0,10:10:24.08:336,24,0	1/1:0,21:21:60.20:836,60,0	1/1:0,24:24:69.13:920,69,0	1/1:0,43:43:99:1469,105,0	1/1:1,19:20:54.18:754,54,0	0/0:14,0:14:42.13:0,42,648	0/0:27,0:27:81.28:0,81,1284	1/1:0,16:16:45.15:629,45,0	1/1:0,28:28:81.24:1097,81,0	1/1:0,31:31:87.29:1208,87,0	1/1:0,10:10:27.09:378,27,0
chr10	65448289	.	TC	T	13866.67	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=3.456;DP=644;FS=4.866;HRun=3;HaplotypeScore=91.3803;InbreedingCoeff=0.9967;MQ=80.36;MQ0=2;MQRankSum=-4.432;QD=32.10;ReadPosRankSum=1.674;VQSLOD=5.0425;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,39:40:93.29:1152,93,0	1/1:1,5:6:15.05:186,15,0	0/0:32,0:28:71.98:0,72,899	0/0:26,0:25:43.64:0,44,651	0/0:34,0:34:99:0,102,1465	1/1:0,26:26:72.23:892,72,0	1/1:1,9:9:24.08:297,24,0	1/1:1,22:23:63.16:744,63,0	0/0:19,0:19:54.15:0,54,739	0/0:31,0:30:87.24:0,87,1209	0/0:28,0:28:78.11:0,78,1058	1/1:1,22:23:63.20:780,63,0	0/0:9,0:9:27.09:0,27,388	1/1:1,17:18:34.29:612,34,0	1/1:0,22:22:60.19:743,60,0	1/1:0,19:19:54.17:669,54,0	1/1:0,22:22:57.18:705,57,0	1/1:2,30:32:84.26:1040,84,0	1/1:0,25:25:72.18:864,72,0	1/1:3,34:36:90.28:1112,90,0	1/1:1,14:15:33.10:408,33,0	1/1:0,23:23:54.13:651,54,0	0/0:18,0:18:41.90:0,42,703	0/0:15,0:15:42.14:0,42,602	1/1:0,21:21:60.15:725,60,0	1/1:2,22:24:26.03:761,26,0	1/1:0,29:29:78.25:966,78,0	1/1:2,15:17:45.14:557,45,0
chr10	65448295	.	CA	C	1688.83	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-6.424;DP=644;FS=1.770;HRun=2;HaplotypeScore=133.0976;InbreedingCoeff=0.9909;MQ=70.90;MQ0=10;MQRankSum=1.412;QD=30.16;ReadPosRankSum=1.249;VQSLOD=3.2765;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,99,1455	0/0:6,0:6:15.05:0,15,223	0/0:22,0:18:51:0,51,578	0/0:22,0:20:47.05:0,47,611	0/0:36,0:35:99:0,105,1462	0/0:29,0:29:75.21:0,75,1040	0/0:13,0:12:30.08:0,30,394	0/0:22,0:22:66.19:0,66,910	0/0:18,0:18:54.17:0,54,784	1/1:1,30:30:84.21:1022,84,0	1/1:1,24:25:61.60:789,62,0	0/0:22,0:21:63.20:0,63,902	0/0:10,0:10:27.08:0,27,384	0/0:21,0:20:57.14:0,57,754	0/0:24,0:23:63.14:0,63,859	0/0:20,0:19:54.14:0,54,746	0/0:26,0:26:63.13:0,63,872	0/0:35,0:34:84.23:0,84,1186	0/0:26,0:26:72.20:0,72,998	0/0:33,0:31:77.33:0,77,1156	0/0:13,0:13:32.84:0,33,438	0/0:22,0:22:54.10:0,54,690	0/0:19,0:18:51.15:0,51,721	0/0:18,0:17:42.14:0,42,623	0/0:21,0:21:60.17:0,60,795	0/0:26,1:27:42.57:0,43,1068	0/0:27,0:27:78.17:0,78,1050	0/0:14,0:14:42.13:0,42,603
chr10	65448616	.	G	GAT	13505.25	PASS	AB=0.548;AC=37;AF=0.661;AN=56;BaseQRankSum=-7.260;DP=492;FS=0.000;HRun=0;HaplotypeScore=92.9148;InbreedingCoeff=0.9309;MQ=86.14;MQ0=1;MQRankSum=-5.297;QD=43.15;ReadPosRankSum=3.558;VQSLOD=6.4634;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,26:29:69.24:1251,69,0	1/1:0,5:5:12.04:220,12,0	0/0:35,0:34:86.93:0,87,1163	0/0:38,0:34:20.20:0,20,762	0/0:15,0:15:45.15:0,45,645	1/1:1,17:18:33.11:604,33,0	1/1:2,13:15:39.13:714,39,0	1/1:0,18:18:54.19:982,54,0	0/0:12,0:12:27.09:0,27,376	0/0:14,0:14:33.10:0,33,457	0/0:17,0:17:42.14:0,42,602	1/1:1,11:12:33.11:599,33,0	0/0:11,0:11:30.10:0,30,430	1/1:0,12:12:30.10:550,30,0	1/1:2,22:24:60.21:1094,60,0	1/1:3,10:13:27.09:494,27,0	1/1:1,20:21:51.17:918,51,0	1/1:0,16:16:42.14:769,42,0	1/1:7,13:20:45.15:794,45,0	1/1:7,17:24:48.14:880,48,0	1/1:1,18:19:48.16:879,48,0	1/1:3,5:8:9:165,9,0	0/0:13,0:13:33.10:0,33,453	0/0:23,0:23:60.20:0,60,860	1/1:0,10:10:18.06:330,18,0	0/1:3,13:17:0.86:673,0,1	1/1:1,26:27:78.27:1423,78,0	1/1:1,3:4:9.03:165,9,0
chr10	65448649	.	ACT	A	58.47	PASS	AB=0.821;AC=3;AF=0.054;AN=56;BaseQRankSum=-1.809;DP=548;FS=0.000;HRun=0;HaplotypeScore=175.7001;InbreedingCoeff=0.2620;MQ=59.86;MQ0=12;MQRankSum=1.562;QD=1.67;ReadPosRankSum=0.164;VQSLOD=2.0719;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:26:14.84:0,15,110	0/0:7,0:7:8.87:0,9,57	0/0:34,0:16:5.98:0,6,52	0/0:39,0:14:8.06:0,8,46	0/1:18,5:22:57.08:57,0,324	0/0:18,0:18:11.80:0,12,76	0/0:17,0:17:3.95:0,4,37	1/1:10,2:12:9.02:97,9,0	0/0:8,0:16:13.53:0,14,104	0/0:19,0:16:32.83:0,33,261	0/0:11,0:10:2.99:0,3,25	0/0:18,0:17:18.30:0,18,99	0/0:14,0:14:30.08:0,30,429	0/0:14,0:15:11.34:0,11,68	0/0:27,0:25:18.89:0,19,105	0/0:14,0:15:28.64:0,29,148	0/0:16,0:16:23.62:0,24,156	0/0:14,0:13:16.03:0,16,153	0/0:26,0:24:39.73:0,40,377	0/0:31,0:32:29.54:0,30,209	0/0:15,0:15:5.99:0,6,50	0/0:16,0:15:3.41:0,3,19	0/0:11,0:11:18.05:0,18,250	0/0:19,0:19:1.45:0,1,451	0/0:20,0:20:21.83:0,22,134	0/0:23,0:22:38.85:0,39,364	0/0:31,0:30:38.63:0,39,277	0/0:8,0:7:5.96:0,6,44
chr10	65448697	.	ACACACACACACACACACACACACACAC	A	3485.62	PASS	AB=0.847;AC=18;AF=0.391;AN=46;BaseQRankSum=4.261;DP=253;FS=13.766;HRun=0;HaplotypeScore=206.0872;InbreedingCoeff=-0.0414;MQ=39.58;MQ0=25;MQRankSum=-6.304;QD=30.58;ReadPosRankSum=1.587;VQSLOD=1.7545;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:7,1:5:13.04:188,0,13	1/1:4,0:3:3.01:182,3,0	./.	./.	0/0:14,0:13:28.03:0,28,1989	0/1:6,0:5:11.35:32,0,11	1/1:2,1:2:3.01:65,3,0	./.	0/0:11,0:11:24.08:0,24,2610	0/0:15,0:13:36.26:0,36,2518	0/0:15,0:12:7:0,7,750	0/1:6,2:7:27.59:152,0,28	0/0:15,0:15:44.98:0,45,4390	0/1:6,3:9:99:348,0,238	0/1:10,0:10:63.11:183,0,63	0/1:10,1:11:16.79:396,0,17	0/1:6,3:7:49.21:538,0,49	0/0:5,0:5:9.03:0,9,424	0/1:6,2:8:99:393,0,364	1/1:10,1:10:9.03:147,9,0	./.	./.	0/0:17,0:15:25.17:0,25,2656	0/0:28,0:26:17.31:0,17,1473	1/1:9,0:8:9.03:195,9,0	0/1:7,2:8:99:369,0,107	0/1:6,2:9:35.33:298,0,35	0/0:4,0:2:2.94:0,3,18
chr10	65448707	.	ACACACACACACACACAC	A	2509.02	PASS	AB=0.938;AC=16;AF=0.333;AN=48;BaseQRankSum=4.520;DP=246;FS=3.620;HRun=0;HaplotypeScore=142.4810;InbreedingCoeff=0.1636;MQ=42.20;MQ0=25;MQRankSum=-7.248;QD=26.14;ReadPosRankSum=0.384;VQSLOD=2.8278;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:9,0:6:13.92:189,14,0	1/1:6,0:5:8.93:149,9,0	./.	./.	0/0:11,0:10:19:0,19,1021	0/1:7,0:6:12.08:12,0,28	0/0:4,0:3:3.87:0,4,23	./.	0/0:11,0:11:24.08:0,24,1630	0/0:17,0:15:42.03:0,42,1458	0/0:16,0:13:8.76:0,9,473	0/1:7,1:7:8.99:129,0,9	0/0:15,0:15:44.98:0,45,2700	0/1:4,1:5:99:237,0,115	1/1:5,2:7:11.48:280,11,0	1/1:3,4:7:15.01:508,15,0	0/1:12,0:10:21.16:363,0,21	0/0:6,0:6:12.49:0,12,295	0/1:9,0:8:99:232,0,321	0/0:6,1:6:3.58:0,4,45	0/0:7,0:1:0.47:0,0,1	./.	0/0:15,0:13:25.36:0,25,1600	0/0:30,0:28:20.33:0,20,875	0/1:5,2:6:21.29:222,0,21	0/1:10,0:8:30.73:233,0,31	0/1:9,0:9:63.90:115,0,64	0/0:6,0:4:6.64:0,7,48
chr10	65448726	.	A	AT	1236.17	PASS	AB=0.913;AC=24;AF=0.462;AN=52;BaseQRankSum=4.516;DP=288;FS=2.419;HRun=0;HaplotypeScore=95.3644;InbreedingCoeff=-0.0292;MQ=47.23;MQ0=10;MQRankSum=-3.792;QD=7.27;ReadPosRankSum=-1.199;VQSLOD=3.4536;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:14,1:13:5.37:156,0,5	0/1:6,0:5:20.34:106,0,20	./.	./.	0/0:12,0:11:14.74:0,15,301	0/1:9,0:8:19.35:104,0,19	0/1:8,1:8:30.07:68,0,30	0/0:3,0:3:7.42:0,7,50	0/0:18,0:18:41.97:0,42,509	0/0:4,0:13:35.60:0,36,213	0/0:8,0:16:6.40:0,6,53	1/1:5,3:8:11.65:90,12,0	0/0:14,0:14:41.35:0,41,544	1/1:3,4:7:0.55:29,1,0	1/1:5,2:7:20.05:145,20,0	1/1:1,5:6:17.54:120,18,0	0/1:10,3:12:62.25:110,0,62	0/1:12,0:12:39.23:39,0,114	0/1:12,2:13:40.26:40,0,147	0/1:7,2:8:34.18:44,0,34	1/1:3,0:2:5.14:24,5,0	1/1:2,0:2:2.98:21,3,0	0/0:15,0:14:30.13:0,30,356	0/0:21,0:21:18:0,18,213	0/1:8,2:10:20.03:106,0,20	0/1:14,2:15:35.08:86,0,35	0/1:14,2:16:71.28:71,0,144	0/1:7,0:6:28.38:45,0,28
chr10	65451183	.	T	TG	164.40	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=3.461;DP=480;FS=9.435;HRun=2;HaplotypeScore=108.9263;InbreedingCoeff=0.8741;MQ=50.29;MQ0=7;MQRankSum=-3.695;QD=23.49;ReadPosRankSum=-0.638;VQSLOD=2.4188;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:72.23:0,72,989	0/0:7,0:7:15.01:0,15,247	0/0:25,0:10:24.08:0,24,328	0/0:19,0:13:33:0,33,435	0/0:27,0:27:78.26:0,78,1089	0/0:10,0:10:27.09:0,27,377	0/0:12,0:12:30.10:0,30,419	0/0:21,0:19:54.17:0,54,734	0/0:16,0:16:48.14:0,48,653	1/1:0,6:6:15.04:226,15,0	1/1:1,0:1:3.01:43,3,0	0/0:16,0:16:48.13:0,48,650	0/0:17,0:17:51.17:0,51,711	0/0:11,0:10:27.09:0,27,377	0/0:24,0:24:60.18:0,60,821	0/0:17,0:17:42.14:0,42,587	0/0:22,0:20:63.21:0,63,880	0/0:14,0:13:39.13:0,39,545	0/0:15,0:12:36.08:0,36,481	0/0:22,0:22:66.22:0,66,922	0/0:20,0:19:54.18:0,54,755	0/0:17,0:17:48.16:0,48,670	0/0:15,0:15:45.15:0,45,629	0/0:15,0:15:42.10:0,42,565	0/0:17,0:17:42.14:0,42,575	0/0:21,1:22:14.84:0,15,739	0/0:27,0:27:78.23:0,78,1069	0/0:15,0:15:45.15:0,45,629
chr10	65451251	.	T	TTA	1886.89	PASS	AB=0.720;AC=34;AF=0.739;AN=46;BaseQRankSum=9.493;DP=200;FS=68.739;HRun=0;HaplotypeScore=91.2006;InbreedingCoeff=0.5129;MQ=42.87;MQ0=23;MQRankSum=-9.258;QD=16.27;ReadPosRankSum=2.938;VQSLOD=1.0293;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,3:8:9.02:116,9,0	1/1:1,1:2:3.01:36,3,0	./.	./.	0/0:22,0:22:63.21:0,63,1014	1/1:3,2:4:8.35:98,8,0	./.	./.	0/0:13,0:13:27.08:0,27,415	1/1:0,4:4:12.04:176,12,0	1/1:3,4:4:12.04:157,12,0	1/1:0,1:1:3.01:41,3,0	0/0:15,0:15:42.14:0,42,678	1/1:1,2:1:3.01:41,3,0	1/1:7,6:13:21.07:282,21,0	1/1:0,3:3:9.03:122,9,0	1/1:6,3:8:10.55:112,11,0	0/1:7,5:11:25.33:165,0,25	./.	1/1:8,2:8:2.58:80,3,0	1/1:3,1:1:3.01:34,3,0	1/1:6,0:5:2.45:29,2,0	0/0:13,0:13:29.98:0,30,460	0/0:8,0:7:18.06:0,18,285	1/1:2,4:5:14.94:180,15,0	0/1:7,4:11:24.01:209,0,24	1/1:3,3:6:17.57:166,18,0	1/1:2,0:2:0.47:1,0,0
chr10	65451254	.	T	TAC	1352.88	PASS	AB=0.722;AC=26;AF=0.565;AN=46;BaseQRankSum=7.844;DP=203;FS=38.681;HRun=0;HaplotypeScore=99.2807;InbreedingCoeff=0.3049;MQ=42.29;MQ0=24;MQRankSum=-6.487;QD=12.08;ReadPosRankSum=6.013;VQSLOD=1.5682;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,3:8:2.98:84,3,0	1/1:1,1:2:3.01:33,3,0	./.	./.	0/0:23,0:23:60.18:0,60,870	0/1:3,2:4:3.27:66,0,3	./.	./.	0/0:12,0:12:27.09:0,27,409	1/1:0,4:4:12.04:164,12,0	1/1:3,4:4:12.04:144,12,0	0/1:1,1:2:4.53:32,0,5	0/0:15,0:15:44.95:0,45,612	1/1:2,2:2:3.89:32,4,0	1/1:8,6:13:12.71:218,13,0	1/1:0,3:3:9.03:113,9,0	1/1:6,3:8:2.35:76,2,0	0/1:7,5:11:52.84:96,0,53	./.	0/1:9,2:9:31.72:59,0,32	1/1:3,1:1:2.50:9,2,0	0/0:6,0:5:10.20:0,10,39	0/0:11,0:11:20.96:0,21,321	0/0:8,0:7:15.03:0,15,208	1/1:2,4:5:6.63:144,7,0	0/1:7,4:11:39.93:144,0,40	0/1:3,3:6:10.50:96,0,10	0/0:2,0:2:1.25:0,1,3
chr10	65451268	.	A	ATC	1001.06	PASS	AB=0.667;AC=27;AF=0.614;AN=44;BaseQRankSum=7.590;DP=154;FS=40.132;HRun=0;HaplotypeScore=58.1964;InbreedingCoeff=0.4472;MQ=48.86;MQ0=24;MQRankSum=-7.522;QD=15.64;ReadPosRankSum=6.223;VQSLOD=1.3719;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,3:3:6.01:64,6,0	1/1:1,1:2:3.01:35,3,0	0/0:7,0:1:2.80:0,3,13	0/0:3,0:2:6.01:0,6,63	0/0:22,0:22:60.19:0,60,922	1/1:1,2:2:6.01:65,6,0	./.	./.	0/0:17,0:17:39.13:0,39,611	1/1:0,4:4:12.04:143,12,0	1/1:3,4:4:12.03:126,12,0	1/1:1,2:2:6.02:78,6,0	0/0:15,0:15:42.11:0,42,618	1/1:1,3:3:8.82:69,9,0	1/1:1,3:3:8.97:81,9,0	1/1:0,1:1:3.01:34,3,0	0/1:4,2:6:5.16:64,0,5	0/1:2,3:5:36.89:103,0,37	./.	1/1:3,3:4:9.01:89,9,0	./.	./.	0/0:8,0:8:18.05:0,18,256	0/0:7,0:6:12.04:0,12,190	1/1:2,2:3:1.13:40,1,0	0/1:2,3:5:34.41:103,0,34	1/1:1,2:3:1.65:64,2,0	./.
chr10	65452407	.	TG	T	734.85	PASS	AB=0.948;AC=7;AF=0.125;AN=56;BaseQRankSum=-7.760;DP=304;FS=23.334;HRun=10;HaplotypeScore=67.4657;InbreedingCoeff=0.4752;MQ=49.77;MQ0=4;MQRankSum=6.840;QD=10.07;ReadPosRankSum=0.907;VQSLOD=0.8196;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:4:8.39:0,8,39	0/0:1,0:1:2.80:0,3,13	0/1:12,0:4:0.02:0,0,0	0/0:19,0:4:5.97:0,6,51	1/1:1,18:19:50.89:433,51,0	0/0:12,0:12:16.79:0,17,78	0/0:9,0:9:16.79:0,17,79	0/0:16,0:11:5.82:0,6,75	1/1:0,18:18:47.99:417,48,0	0/0:20,0:19:39.17:0,39,182	0/0:12,0:12:19.63:0,20,92	0/0:8,0:7:16.79:0,17,78	0/1:10,1:11:8:8,0,148	0/0:8,0:9:14.03:0,14,67	0/0:13,0:12:19.59:0,20,91	0/0:9,0:8:13.99:0,14,65	0/0:16,0:17:38.45:0,38,177	0/0:4,0:4:11.19:0,11,52	0/0:13,0:13:16.79:0,17,78	0/0:4,0:6:5.64:0,6,27	0/0:3,0:2:2.80:0,3,13	0/0:5,0:5:5.60:0,6,26	0/0:7,0:7:21.06:0,21,232	0/0:12,1:11:21.06:0,21,232	0/0:9,0:7:11.19:0,11,52	0/1:12,0:12:2.01:2,0,68	0/0:15,0:15:36.07:0,36,166	0/0:6,0:6:16.79:0,17,78
chr10	65452412	.	G	GGGGGA	10542.95	PASS	AB=1.000;AC=44;AF=0.786;AN=56;BaseQRankSum=-6.945;DP=306;FS=35.990;HRun=0;HaplotypeScore=50.4921;InbreedingCoeff=0.7649;MQ=49.37;MQ0=7;MQRankSum=-7.483;QD=44.30;ReadPosRankSum=0.606;VQSLOD=2.3656;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,3:4:9.03:260,9,0	1/1:0,1:1:3.01:86,3,0	0/1:12,0:4:0.81:1,0,46	0/1:18,0:4:1.04:1,0,52	0/0:19,0:19:51.16:0,51,650	1/1:3,6:10:18.06:519,18,0	1/1:6,9:13:24.04:591,24,0	1/1:9,8:11:27.04:635,27,0	0/0:18,0:18:48.15:0,48,612	1/1:3,0:18:45.15:717,45,0	1/1:2,0:12:21.06:326,21,0	1/1:3,7:9:18.05:519,18,0	0/0:11,0:10:21.06:0,21,357	1/1:2,4:6:18.06:504,18,0	1/1:4,10:13:24.07:687,24,0	1/1:3,6:8:18.05:515,18,0	1/1:3,13:17:41.81:1130,42,0	1/1:2,4:6:12.03:347,12,0	1/1:6,6:12:18.04:502,18,0	1/1:5,1:6:6.01:167,6,0	1/1:1,2:2:3:87,3,0	1/1:0,3:3:6.02:173,6,0	0/0:8,0:8:21.07:0,21,406	0/0:12,0:10:21.07:0,21,410	1/1:4,5:8:18.06:468,18,0	1/1:2,8:10:24.08:641,24,0	1/1:1,14:16:42.14:1179,42,0	1/1:1,5:6:18.06:489,18,0
chr10	65453410	.	GCAACACAA	G	3233.06	PASS	AB=1.000;AC=31;AF=0.620;AN=50;BaseQRankSum=9.200;DP=423;FS=0.519;HRun=0;HaplotypeScore=101.8183;InbreedingCoeff=0.5439;MQ=50.04;MQ0=8;MQRankSum=-9.006;QD=17.76;ReadPosRankSum=0.174;VQSLOD=2.3950;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:13,0:13:28.57:29,0,46	1/1:3,0:3:2.98:22,3,0	0/0:49,0:31:65.39:0,65,1979	0/0:50,0:35:79.18:0,79,2261	0/0:8,0:8:17.95:0,18,259	1/1:5,0:5:3.01:64,3,0	1/1:21,1:21:2.46:578,2,0	1/1:1,0:6:15.04:228,15,0	0/0:25,0:25:75.23:0,75,2454	0/1:12,0:9:54.96:55,0,57	./.	1/1:13,2:14:23.27:440,23,0	0/0:30,0:30:81.21:0,81,2830	1/1:0,10:10:3.01:81,3,0	1/1:4,14:18:18.06:420,18,0	1/1:11,0:11:10.59:213,11,0	1/1:13,0:11:15.05:306,15,0	1/1:13,0:12:24.07:485,24,0	0/0:3,0:1:3.01:0,3,58	1/1:5,0:5:6.02:96,6,0	0/1:16,0:15:2.14:149,0,2	./.	0/0:6,0:6:12.04:0,12,321	0/0:61,0:60:99:0,178,6697	1/1:7,0:7:3.01:81,3,0	1/1:6,0:6:8.95:82,9,0	1/1:0,6:6:3.01:83,3,0	./.
chr10	65453415	.	A	AG	2365.63	PASS	AB=0.811;AC=29;AF=0.604;AN=48;BaseQRankSum=10.542;DP=387;FS=1.173;HRun=0;HaplotypeScore=59.5185;InbreedingCoeff=0.5334;MQ=49.55;MQ0=10;MQRankSum=-8.924;QD=16.09;ReadPosRankSum=-0.359;VQSLOD=5.3180;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:6,1:6:31.47:33,0,31	./.	0/0:49,0:28:45.38:0,45,1037	0/0:51,0:31:77.35:0,77,1044	0/0:6,0:6:9.03:0,9,114	1/1:0,4:4:3.01:48,3,0	0/1:4,15:18:7.36:397,0,7	1/1:6,0:6:15.04:198,15,0	0/0:25,0:25:69.23:0,69,961	0/1:5,0:4:35.92:38,0,36	./.	1/1:4,10:12:24.04:350,24,0	0/0:29,0:29:78.26:0,78,1089	1/1:10,0:10:3.01:46,3,0	1/1:16,4:19:18.06:282,18,0	1/1:1,9:10:11.78:154,12,0	1/1:0,10:8:15.05:228,15,0	1/1:1,13:13:27.09:429,27,0	0/0:1,0:1:3.01:0,3,42	1/1:0,2:2:6.02:95,6,0	1/1:10,4:12:8.62:125,9,0	./.	0/0:6,0:6:12.04:0,12,167	0/0:66,1:66:99:0,196,2699	1/1:2,1:3:3:29,3,0	1/1:2,1:2:3.01:42,3,0	1/1:6,0:6:3.01:45,3,0	./.
chr10	65453487	.	G	GCAA	191.38	PASS	AB=0.990;AC=9;AF=0.225;AN=40;BaseQRankSum=4.572;DP=348;FS=21.500;HRun=0;HaplotypeScore=56.1589;InbreedingCoeff=0.0150;MQ=38.34;MQ0=82;MQRankSum=-4.553;QD=3.48;ReadPosRankSum=-1.554;VQSLOD=-0.7634;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	1/1:4,0:2:0.89:3,1,0	./.	0/0:6,0:1:2.97:0,3,20	./.	0/0:10,0:2:2.84:0,3,14	0/0:21,0:8:15:0,15,204	0/0:9,0:2:3.01:0,3,35	0/0:35,0:34:90.24:0,90,1399	0/0:14,0:1:2.22:0,2,7	./.	0/1:10,0:8:44.71:45,0,118	0/0:29,0:28:72.11:0,72,1072	0/1:6,0:3:9.97:10,0,82	0/1:18,1:12:61.16:75,0,61	0/1:6,0:6:7.01:7,0,106	0/0:8,0:5:5.91:0,6,55	0/1:4,0:4:34.85:35,0,43	0/0:11,0:7:9.19:0,9,85	./.	0/0:14,0:5:2.84:0,3,14	./.	./.	0/0:73,0:70:99:0,187,2909	0/0:11,0:3:4.18:0,4,53	0/0:19,0:4:5.23:0,5,58	1/1:2,4:6:9.03:130,9,0	./.
chr10	65453520	.	GCAA	G	136.60	PASS	AB=0.912;AC=11;AF=0.229;AN=48;BaseQRankSum=4.887;DP=399;FS=27.404;HRun=0;HaplotypeScore=52.8263;InbreedingCoeff=0.1426;MQ=36.45;MQ0=80;MQRankSum=-3.997;QD=1.38;ReadPosRankSum=-0.888;VQSLOD=-0.3339;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	1/1:9,0:9:4.03:22,4,0	0/0:12,0:4:9.03:0,9,133	0/0:16,0:5:14.95:0,15,224	0/0:5,0:1:3.01:0,3,69	0/0:12,0:1:3.01:0,3,31	0/1:22,1:11:19.25:19,0,193	1/1:9,0:2:2.04:6,2,0	0/0:24,0:24:72.20:0,72,1410	0/0:17,0:6:9.95:0,10,52	0/0:3,0:1:1.25:0,1,3	0/1:10,2:10:26.44:26,0,54	0/0:38,0:36:99:0,105,1997	1/1:7,3:7:7.59:87,8,0	0/1:18,2:12:54.60:57,0,55	0/0:9,0:6:6.78:0,7,44	0/0:8,0:6:2.98:0,3,21	0/1:4,1:5:38.56:39,0,103	0/0:4,0:1:2.92:0,3,17	0/0:6,0:4:5.27:0,5,31	0/0:18,0:7:0.89:0,1,2	./.	./.	0/0:68,0:67:99:0,188,3634	0/1:11,0:6:7.43:7,0,23	0/0:27,0:11:20.14:0,20,232	0/0:7,0:7:8.43:0,8,75	./.
chr10	65453532	.	A	ACAG	649.79	PASS	AB=0.931;AC=16;AF=0.348;AN=46;BaseQRankSum=5.449;DP=395;FS=40.154;HRun=0;HaplotypeScore=57.2688;InbreedingCoeff=0.4742;MQ=37.25;MQ0=68;MQRankSum=-5.225;QD=6.02;ReadPosRankSum=-0.445;VQSLOD=0.5184;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	1/1:2,8:9:6.02:112,6,0	0/0:15,0:4:5.98:0,6,68	0/0:22,0:8:10.17:0,10,231	0/0:5,0:1:3.01:0,3,48	0/0:7,0:1:2.97:0,3,20	0/1:21,4:13:64.63:65,0,120	1/1:8,0:3:4.21:23,4,0	0/0:25,0:24:63.20:0,63,983	0/0:15,0:6:8.98:0,9,125	0/0:3,0:1:0.47:0,0,1	1/1:12,2:11:3.39:19,3,0	0/0:46,0:44:99:0,102,1594	1/1:8,2:7:8.46:135,8,0	1/1:15,3:11:6.09:129,6,0	1/1:8,3:7:11.97:178,12,0	./.	0/1:5,0:5:4.05:4,0,28	0/0:6,0:3:0.06:0,0,43	0/0:8,0:4:8.92:0,9,87	0/0:16,0:6:0:0,0,0	./.	./.	0/0:59,0:58:99:0,162,2517	0/0:10,0:6:3.01:0,3,46	0/0:20,0:11:21.03:0,21,277	1/1:5,2:7:6.02:130,6,0	./.
chr10	65453681	.	AGC	A	35.28	PASS	AB=0.881;AC=6;AF=0.150;AN=40;BaseQRankSum=4.073;DP=369;FS=17.701;HRun=0;HaplotypeScore=38.1050;InbreedingCoeff=0.1715;MQ=34.94;MQ0=99;MQRankSum=-3.394;QD=0.78;ReadPosRankSum=-0.363;VQSLOD=-0.0438;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:1:3.01:0,3,39	./.	0/0:8,0:1:3.01:0,3,37	0/0:24,0:7:18.06:0,18,285	./.	1/1:7,1:2:2.99:23,3,0	0/1:24,1:8:2.26:2,0,126	./.	0/0:32,0:30:75.11:0,75,1403	0/0:23,0:4:11.99:0,12,174	./.	0/0:7,0:3:3.01:0,3,58	0/0:43,0:42:99:0,114,2144	0/0:10,1:3:3.01:0,3,60	0/0:6,0:3:3.01:0,3,61	0/0:6,0:3:6.02:0,6,101	0/1:6,2:7:34.74:35,0,64	1/1:1,3:4:8.99:77,9,0	./.	0/0:2,0:1:3.01:0,3,40	0/0:24,0:5:3.01:0,3,44	0/0:5,0:1:3.01:0,3,41	./.	0/0:52,0:45:99:0,126,2450	0/0:10,0:2:3.01:0,3,30	0/0:14,0:2:3.01:0,3,34	./.	./.
chr10	65453754	.	A	ACAG	154.18	PASS	AB=0.958;AC=10;AF=0.278;AN=36;BaseQRankSum=5.554;DP=330;FS=19.535;HRun=0;HaplotypeScore=51.1648;InbreedingCoeff=0.3072;MQ=35.89;MQ0=65;MQRankSum=-4.799;QD=1.88;ReadPosRankSum=0.212;VQSLOD=-0.6769;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/0:2,0:2:3.01:0,3,36	0/0:11,0:1:2.80:0,3,13	0/0:25,0:8:14.13:0,14,178	./.	./.	0/1:23,0:12:48.42:48,0,66	./.	0/0:38,0:35:87.20:0,87,1292	0/0:12,0:5:12.04:0,12,188	./.	1/1:6,2:6:3.01:45,3,0	0/0:33,0:27:63.21:0,63,987	1/1:8,1:5:3.32:38,3,0	./.	0/1:10,1:11:59.09:98,0,59	0/0:4,0:5:2.97:0,3,20	1/1:6,0:5:6.23:33,6,0	./.	0/0:4,0:2:2.88:0,3,15	1/1:25,0:5:2.37:8,2,0	0/0:9,0:2:5.74:0,6,30	./.	0/0:49,0:46:99:0,118,1732	0/0:8,0:4:5.80:0,6,31	./.	0/0:4,0:3:5.52:0,6,27	./.
chr10	65453813	.	AGC	A	349.47	PASS	AB=0.847;AC=10;AF=0.357;AN=28;BaseQRankSum=6.679;DP=423;FS=64.719;HRun=0;HaplotypeScore=114.2697;InbreedingCoeff=-0.0323;MQ=33.86;MQ0=137;MQRankSum=-7.400;QD=2.25;ReadPosRankSum=1.772;VQSLOD=-0.6627;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	./.	./.	0/1:17,8:12:59.88:60,0,113	0/0:19,0:1:3.01:0,3,58	0/0:32,0:30:77.94:0,78,1364	0/0:21,0:2:5.98:0,6,68	./.	0/0:13,0:8:8.93:0,9,83	0/0:37,0:33:87.11:0,87,1644	0/1:14,4:12:7.65:8,0,104	1/1:9,5:12:3.90:67,4,0	0/1:20,6:22:24.99:147,0,25	0/1:10,4:12:38.73:39,0,57	0/1:19,2:17:51.20:51,0,175	./.	./.	1/1:29,3:6:11.69:74,12,0	./.	./.	0/0:64,0:58:99:0,163,3101	./.	./.	0/1:5,0:5:8.41:17,0,8	./.
chr10	65453814	.	G	GCAA	2165.89	PASS	AB=0.950;AC=13;AF=0.464;AN=28;BaseQRankSum=8.742;DP=426;FS=101.290;HRun=0;HaplotypeScore=117.4502;InbreedingCoeff=0.0774;MQ=34.15;MQ0=136;MQRankSum=-9.282;QD=12.82;ReadPosRankSum=0.542;VQSLOD=-0.6340;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	./.	./.	0/1:25,0:12:58.31:247,0,58	0/0:18,0:1:3.01:0,3,51	0/0:31,0:29:65.72:0,66,880	0/0:22,0:2:4.82:0,5,31	./.	1/1:14,1:10:2.69:141,3,0	0/0:38,0:34:84.05:0,84,1272	0/1:16,2:12:23.39:124,0,23	1/1:12,2:12:5.81:322,6,0	1/1:20,6:22:0.63:680,1,0	0/1:13,1:12:5.58:222,0,6	0/1:20,2:17:66.49:299,0,66	./.	./.	1/1:29,2:6:12.04:228,12,0	./.	./.	0/0:67,0:61:99:0,156,2388	./.	./.	0/1:4,0:4:16.11:20,0,16	./.
chr10	65453922	.	G	GCAA	486	PASS	AB=0.868;AC=6;AF=0.188;AN=32;BaseQRankSum=6.174;DP=455;FS=34.812;HRun=0;HaplotypeScore=71.4908;InbreedingCoeff=0.0525;MQ=33.97;MQ0=99;MQRankSum=-5.867;QD=5.72;ReadPosRankSum=1.969;VQSLOD=0.6736;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:3,0:2:2.90:0,3,17	./.	0/0:19,0:2:6.01:0,6,62	0/0:12,0:2:1.25:0,1,3	./.	0/0:36,2:16:23.93:0,24,300	./.	0/0:39,0:37:90.09:0,90,1252	./.	0/0:2,0:1:0:0,0,0	0/0:10,1:6:2.74:0,3,12	0/0:45,0:41:89.60:0,90,1286	0/1:15,3:11:37.10:58,0,37	0/1:17,6:20:99:308,0,119	0/1:18,5:16:99:154,0,113	0/1:14,0:13:5.05:5,0,92	0/0:13,0:10:2.13:0,2,119	./.	./.	0/0:40,0:12:5.79:0,6,38	./.	./.	0/0:58,0:52:99:0,129,2018	./.	./.	1/1:7,0:4:5.75:61,6,0	./.
chr10	65453937	.	ACAG	A	533.32	PASS	AB=0.916;AC=9;AF=0.196;AN=46;BaseQRankSum=5.809;DP=527;FS=23.267;HRun=0;HaplotypeScore=72.4817;InbreedingCoeff=0.0926;MQ=33.85;MQ0=101;MQRankSum=-5.681;QD=4.37;ReadPosRankSum=1.852;VQSLOD=0.2338;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:5,0:4:11.94:0,12,118	./.	0/0:22,0:2:5.97:0,6,70	0/0:8,0:3:4.26:0,4,55	./.	0/0:40,1:19:36.10:0,36,565	0/1:19,2:6:43.13:43,0,101	0/0:41,0:39:95.39:0,95,1766	0/0:25,0:3:9.01:0,9,95	1/1:4,0:1:2.84:14,3,0	0/1:14,2:10:30.06:30,0,113	0/0:39,0:37:90.07:0,90,1662	0/1:20,1:14:99:131,0,158	0/1:24,2:23:99:222,0,232	0/1:22,3:19:99:124,0,242	0/0:18,0:17:31.78:0,32,407	0/0:18,0:14:29.70:0,30,398	./.	./.	0/0:40,0:14:21.04:0,21,293	0/0:7,0:3:4.03:0,4,34	0/0:11,0:6:9.02:0,9,116	0/0:59,0:55:99:0,140,2778	0/0:9,0:3:9.03:0,9,107	0/0:11,0:4:12.04:0,12,178	1/1:7,2:6:6.02:96,6,0	0/0:4,0:1:3.01:0,3,40
chr10	65454004	.	C	CAAT	15700.40	PASS	AB=0.684;AC=31;AF=0.554;AN=56;BaseQRankSum=-8.421;DP=806;FS=4.102;HRun=0;HaplotypeScore=116.9610;InbreedingCoeff=0.2642;MQ=39.31;MQ0=44;MQRankSum=-7.444;QD=28.29;ReadPosRankSum=0.916;VQSLOD=5.1300;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,9:10:21.07:478,21,0	0/1:6,3:8:66.46:189,0,66	0/0:37,0:19:53.55:0,54,719	0/0:54,0:19:39.06:0,39,599	0/0:15,0:14:23.97:0,24,333	0/1:5,6:7:37.40:162,0,37	0/1:34,28:47:99:1931,0,138	1/1:1,8:10:29.84:449,30,0	0/0:35,0:35:99:0,105,1639	0/1:11,10:20:99:365,0,266	1/1:1,0:1:2.94:18,3,0	0/1:29,23:43:27.19:1295,0,27	0/0:37,0:37:99:0,102,1691	1/1:19,19:33:9.09:1199,9,0	0/1:25,20:39:3.62:1188,0,4	0/1:19,36:51:9.39:1916,0,9	1/1:23,11:30:22.27:1259,22,0	1/1:19,20:36:65.18:1324,65,0	1/1:3,0:1:2.04:6,2,0	1/1:7,3:6:15.04:283,15,0	1/1:40,30:50:29.46:1919,29,0	0/0:4,1:3:3.01:0,3,33	0/0:6,0:5:5.96:0,6,45	0/0:60,0:59:99:0,165,2681	1/1:7,15:19:12.04:275,12,0	0/1:16,9:21:48.64:755,0,49	0/1:13,11:23:57.41:552,0,57	1/1:0,4:4:6.02:137,6,0
chr10	65454078	.	G	GCAA	2083.50	PASS	AB=0.942;AC=18;AF=0.321;AN=56;BaseQRankSum=6.318;DP=919;FS=0.478;HRun=0;HaplotypeScore=122.5141;InbreedingCoeff=-0.3718;MQ=33.24;MQ0=171;MQRankSum=-4.422;QD=3.40;ReadPosRankSum=-0.732;VQSLOD=2.3872;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:32,0:13:0:0,0,0	0/1:14,1:7:34:95,0,34	0/0:29,0:5:13.85:0,14,176	0/0:34,0:4:5.11:0,5,89	0/0:9,0:4:6.02:0,6,75	0/0:13,0:5:3.01:0,3,39	0/1:87,1:59:99:182,0,837	0/1:38,0:15:19.25:19,0,447	0/0:52,0:51:99:0,141,1940	0/0:40,0:7:15.01:0,15,171	0/0:7,0:5:5.97:0,6,68	0/1:41,10:41:99:421,0,296	0/0:37,0:28:75.09:0,75,997	0/1:35,1:26:99:144,0,224	0/1:46,7:42:99:363,0,560	0/1:43,7:43:99:218,0,788	0/1:34,5:30:99:164,0,544	0/1:31,5:31:99:206,0,576	0/0:6,0:3:2.80:0,3,13	0/1:16,0:12:28.86:29,0,112	0/1:72,3:37:99:127,0,293	0/0:16,0:9:4.56:0,5,57	1/1:7,0:1:2.04:6,2,0	0/0:63,0:60:99:0,144,2186	0/1:20,1:13:52.55:91,0,53	0/1:31,0:15:99:106,0,198	0/1:16,2:14:47.91:48,0,183	0/1:4,0:4:13.01:13,0,75
chr10	65454081	.	ACAG	A	192.23	PASS	AB=0.991;AC=11;AF=0.196;AN=56;BaseQRankSum=6.079;DP=911;FS=10.388;HRun=0;HaplotypeScore=121.0014;InbreedingCoeff=-0.1098;MQ=33.26;MQ0=164;MQRankSum=-7.174;QD=0.51;ReadPosRankSum=2.495;VQSLOD=1.8958;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:13:0:0,0,0	0/0:13,0:5:8.33:0,8,113	0/0:28,0:5:14.97:0,15,238	0/0:38,0:4:11.87:0,12,153	0/0:9,0:4:5.99:0,6,58	0/0:12,0:5:5.97:0,6,57	0/1:86,3:59:76.47:76,0,850	0/0:35,0:16:5.55:0,6,418	0/0:53,0:52:99:0,147,2595	0/1:41,0:8:19.42:19,0,106	0/0:7,0:5:6.49:0,6,92	0/1:48,1:39:58.46:58,0,317	0/0:35,0:26:75.25:0,75,1491	0/1:35,1:25:33.61:34,0,261	0/0:51,0:41:46.41:0,46,481	0/1:50,0:43:14.95:15,0,450	0/0:39,0:30:49.25:0,49,455	0/0:34,0:28:8.38:0,8,370	0/0:5,0:3:2.80:0,3,13	0/1:16,0:13:19.40:19,0,139	0/0:75,0:36:2.42:0,2,313	0/0:15,0:8:0.90:0,1,34	1/1:7,0:1:2.04:6,2,0	0/0:64,0:59:99:0,148,3072	0/1:22,0:14:7.96:8,0,89	0/1:32,0:16:86.08:86,0,196	0/0:19,0:15:18.41:0,18,166	0/0:4,0:4:8.97:0,9,91
chr10	65454090	.	ACAG	A	1269.04	PASS	AB=0.924;AC=13;AF=0.241;AN=54;BaseQRankSum=2.998;DP=864;FS=3.646;HRun=0;HaplotypeScore=111.5586;InbreedingCoeff=-0.2685;MQ=33.46;MQ0=166;MQRankSum=-5.409;QD=3.11;ReadPosRankSum=0.024;VQSLOD=2.2315;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:13:2:0,2,31	0/0:13,0:4:7.58:0,8,103	0/0:30,0:7:14.96:0,15,212	0/0:37,0:4:5.98:0,6,60	0/0:11,0:6:3:0,3,28	0/0:12,0:5:5.95:0,6,81	0/1:74,4:50:99:109,0,308	0/1:31,0:12:4.37:4,0,116	0/0:50,0:50:99:0,111,2052	0/0:40,0:9:8.93:0,9,87	0/0:9,0:7:6.48:0,6,66	0/1:42,3:35:99:123,0,211	0/0:38,0:30:81.10:0,81,1458	0/1:25,4:21:99:110,0,199	0/1:38,3:33:99:204,0,251	0/1:33,9:37:99:387,0,217	0/1:28,5:25:99:159,0,127	0/1:29,3:26:99:236,0,130	./.	0/1:15,0:13:32.27:32,0,96	0/0:78,0:37:17.87:0,18,247	1/1:15,0:7:1.25:3,1,0	0/0:8,0:2:5.95:0,6,70	0/0:63,0:56:99:0,135,2769	0/0:21,0:13:9.02:0,9,108	0/1:29,0:11:8.98:9,0,92	0/1:15,3:14:28.02:28,0,53	0/0:5,0:5:3.01:0,3,38
chr10	65454147	.	ACAC	A	1295.66	PASS	AB=0.868;AC=21;AF=0.375;AN=56;BaseQRankSum=4.986;DP=479;FS=0.000;HRun=0;HaplotypeScore=85.6483;InbreedingCoeff=-0.2488;MQ=44.99;MQ0=25;MQRankSum=-7.081;QD=5.71;ReadPosRankSum=1.664;VQSLOD=2.1990;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:7,0:4:18.84:30,0,19	1/1:4,1:2:3.01:46,3,0	0/0:40,0:11:20.63:0,21,299	0/0:43,0:10:14.73:0,15,202	0/0:8,0:8:15.03:0,15,239	0/1:4,1:5:39.29:39,0,44	0/1:17,6:17:99:228,0,109	0/0:13,0:5:11.94:0,12,94	0/0:39,0:39:99:0,99,2033	0/1:17,0:9:10.56:11,0,62	0/0:3,1:4:6.01:0,6,78	0/1:20,5:21:99:168,0,242	0/0:31,0:31:86.96:0,87,1819	0/1:8,3:10:27.51:67,0,28	0/1:20,2:18:84.22:84,0,285	0/1:10,3:13:95.37:95,0,132	0/0:10,1:10:2.99:0,3,25	0/1:7,1:7:17.45:40,0,17	1/1:5,1:2:3.01:46,3,0	0/1:6,2:8:39.24:57,0,39	0/1:22,8:15:27.63:268,0,28	1/1:3,3:4:9.03:139,9,0	0/0:4,0:3:9.01:0,9,161	0/0:59,0:58:99:0,156,3239	0/1:3,1:3:33.86:34,0,38	0/1:12,2:11:48.95:49,0,140	0/1:15,2:16:48.79:49,0,257	0/1:6,0:6:10.07:10,0,114
chr10	65454159	.	ATAG	A	107.77	PASS	AB=0.980;AC=13;AF=0.232;AN=56;BaseQRankSum=4.276;DP=480;FS=1.416;HRun=0;HaplotypeScore=106.0413;InbreedingCoeff=-0.1816;MQ=45.01;MQ0=26;MQRankSum=-5.101;QD=0.77;ReadPosRankSum=-3.887;VQSLOD=0.6830;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:8,1:5:26.53:27,0,132	1/1:3,0:1:2.60:10,3,0	0/0:38,2:12:2.98:0,3,418	0/0:37,1:11:7.03:0,7,420	0/0:7,0:7:15.05:0,15,293	0/1:10,0:9:10.55:11,0,218	0/1:20,0:15:20.94:21,0,337	0/0:17,0:8:24.08:0,24,526	0/0:34,0:34:92.56:0,93,2058	0/0:19,0:11:7.26:0,7,429	0/0:8,0:6:12.04:0,12,212	0/0:22,0:20:14.78:0,15,479	0/0:31,0:31:88.65:0,89,1938	0/1:13,0:12:0:0,0,86	0/1:23,0:20:16.05:16,0,659	0/0:14,0:14:22.39:0,22,441	0/0:6,0:6:8.92:0,9,66	0/1:7,0:7:2.32:2,0,21	0/0:11,0:6:5.83:0,6,137	0/1:6,1:7:31.19:31,0,152	0/1:31,0:17:40.60:41,0,62	0/1:7,0:5:52.48:52,0,68	0/0:2,0:2:6.02:0,6,121	0/0:55,1:55:99:0,157,3542	0/1:4,0:3:20.64:21,0,123	0/0:17,0:14:6.03:0,6,400	0/0:18,0:17:28.64:0,29,603	0/1:6,0:6:15.40:15,0,243
chr10	65454192	.	ACAG	A	3480.25	PASS	AB=0.975;AC=25;AF=0.446;AN=56;BaseQRankSum=13.241;DP=610;FS=83.442;HRun=0;HaplotypeScore=139.1074;InbreedingCoeff=0.1606;MQ=36.59;MQ0=53;MQRankSum=-10.133;QD=9.28;ReadPosRankSum=1.567;VQSLOD=0.0042;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:18,1:10:23.44:93,0,23	0/0:4,0:1:0:0,0,0	0/0:30,0:12:27.05:0,27,453	0/0:29,0:16:15.63:0,16,531	0/0:5,0:5:12.04:0,12,276	1/1:10,0:8:14.96:132,15,0	0/1:27,0:19:40.06:105,0,40	0/1:30,0:23:99:182,0,227	0/0:39,0:39:99:0,114,2441	1/1:25,0:9:18.02:181,18,0	0/0:10,0:8:4.19:0,4,21	0/1:34,1:32:43.18:287,0,43	0/0:30,0:29:84.29:0,84,1845	1/1:19,0:17:6.01:294,6,0	1/1:29,0:25:48.16:499,48,0	0/1:27,1:27:4.14:397,0,4	0/1:10,0:9:1.98:85,0,2	0/1:10,1:11:53.36:53,0,58	0/0:15,0:8:11.47:0,11,109	0/1:10,1:7:12.23:87,0,12	0/1:45,0:27:79.84:99,0,80	1/1:5,0:3:3.01:33,3,0	0/0:8,0:4:9.01:0,9,121	0/0:65,0:65:99:0,172,3744	0/1:10,0:8:26.42:52,0,26	1/1:23,0:19:40.52:340,41,0	1/1:28,1:26:40.35:510,40,0	0/1:6,0:5:34.97:52,0,35
chr10	65454195	.	GCAA	G	5911.34	PASS	AB=0.787;AC=28;AF=0.500;AN=56;BaseQRankSum=12.284;DP=584;FS=63.693;HRun=0;HaplotypeScore=125.7337;InbreedingCoeff=0.2293;MQ=36.13;MQ0=60;MQRankSum=-9.383;QD=16.11;ReadPosRankSum=1.648;VQSLOD=2.1235;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:15,3:9:11.99:137,0,12	0/0:3,1:1:0:0,0,0	0/0:27,0:9:23.28:0,23,384	0/0:29,0:14:22.47:0,22,526	0/0:6,0:6:12.04:0,12,276	1/1:2,7:8:15.05:231,15,0	0/1:17,9:19:18.86:201,0,19	0/1:13,13:20:76.65:459,0,77	0/0:39,0:39:88.07:0,88,2390	0/1:17,3:8:25.52:273,0,26	1/1:6,1:5:2.84:14,3,0	0/1:16,18:30:2.92:446,0,3	0/0:29,0:28:84.25:0,84,1708	1/1:9,12:18:3.71:484,4,0	1/1:8,21:25:56.66:847,57,0	1/1:14,15:28:34.17:664,34,0	0/1:6,3:9:4.93:142,0,5	0/1:8,3:11:2.06:141,0,2	0/0:14,0:7:7.79:0,8,60	0/1:6,4:6:14.85:140,0,15	0/1:32,10:27:72.35:167,0,72	1/1:5,1:2:3.01:51,3,0	0/0:8,0:4:9.03:0,9,174	0/0:61,0:60:99:0,172,3750	0/1:9,0:7:18.59:110,0,19	1/1:13,12:19:34.18:564,34,0	1/1:11,17:25:35.08:739,35,0	1/1:4,2:5:6.02:102,6,0
chr10	65454198	.	ACAG	A	4104.45	PASS	AB=0.915;AC=32;AF=0.571;AN=56;BaseQRankSum=12.984;DP=567;FS=79.214;HRun=0;HaplotypeScore=128.2745;InbreedingCoeff=0.2808;MQ=36.60;MQ0=51;MQRankSum=-11.274;QD=11.53;ReadPosRankSum=1.094;VQSLOD=-0.1208;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:8:9.49:99,9,0	0/0:4,0:1:0:0,0,0	0/0:27,0:8:20.84:0,21,285	0/0:32,1:15:18.18:0,18,495	0/0:8,0:8:18.04:0,18,323	1/1:8,0:7:14.96:133,15,0	0/1:22,2:16:4.47:132,0,4	1/1:24,0:18:30.08:235,30,0	0/0:38,0:38:99:0,100,2219	0/1:16,0:9:53.37:139,0,53	1/1:4,0:3:5.92:41,6,0	0/1:30,5:30:32.79:334,0,33	0/0:30,0:29:81.16:0,81,1511	1/1:21,1:19:0.69:339,1,0	1/1:26,2:25:59.84:587,60,0	0/1:29,2:29:5.37:424,0,5	0/1:8,2:9:14.74:142,0,15	0/1:11,0:11:43.48:58,0,43	0/1:13,0:8:11.82:19,0,12	1/1:10,0:6:2.38:91,2,0	1/1:37,1:25:2.52:113,3,0	1/1:6,0:2:3.01:33,3,0	0/0:8,0:5:12.03:0,12,228	0/0:62,0:62:99:0,177,3574	0/1:6,3:6:18.93:170,0,19	1/1:19,2:17:37.81:387,38,0	1/1:21,5:23:16.43:565,16,0	1/1:2,0:2:6.01:63,6,0
chr10	65454201	.	GCAA	G	1504.58	PASS	AB=0.983;AC=26;AF=0.464;AN=56;BaseQRankSum=13.415;DP=567;FS=52.645;HRun=0;HaplotypeScore=139.2424;InbreedingCoeff=0.1506;MQ=36.38;MQ0=50;MQRankSum=-9.654;QD=4.43;ReadPosRankSum=4.113;VQSLOD=0.7139;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:17,1:8:9.32:26,0,9	0/0:5,0:2:2.88:0,3,15	0/0:26,0:7:14.83:0,15,167	0/0:33,0:14:18.06:0,18,439	0/0:9,0:8:18.05:0,18,313	1/1:9,0:8:5.60:26,6,0	0/1:22,1:15:35.27:35,0,55	0/1:24,0:18:32.74:33,0,101	0/0:39,0:39:99:0,110,2061	0/1:15,0:9:18.21:18,0,62	0/0:4,0:3:0:0,0,0	0/1:32,1:28:10.54:141,0,11	0/0:29,0:28:72.01:0,72,1325	0/1:22,1:20:12.10:134,0,12	1/1:24,4:26:42.56:250,43,0	1/1:28,5:31:30.69:264,31,0	0/1:12,0:10:17.49:58,0,17	1/1:9,2:11:0.21:122,0,0	0/0:13,0:8:7.36:0,7,49	0/1:10,0:6:11.54:28,0,12	0/1:38,0:25:29.66:30,0,98	1/1:6,0:2:2.80:13,3,0	0/0:6,0:4:12.04:0,12,238	0/0:63,0:62:99:0,171,3183	0/1:10,0:7:20.30:69,0,20	1/1:19,0:16:23.52:140,24,0	1/1:26,0:23:30.20:275,30,0	1/1:2,0:2:5.17:20,5,0
chr10	65454246	.	GCAA	G	1859.77	PASS	AB=0.922;AC=22;AF=0.393;AN=56;BaseQRankSum=11.262;DP=678;FS=28.665;HRun=0;HaplotypeScore=168.0848;InbreedingCoeff=-0.2698;MQ=36.33;MQ0=63;MQRankSum=-10.901;QD=4.48;ReadPosRankSum=-2.286;VQSLOD=0.9778;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:11:14.78:98,15,0	0/0:5,0:4:2.94:0,3,18	0/0:43,0:8:23.94:0,24,351	0/0:46,0:4:3.01:0,3,30	0/0:12,0:8:21.06:0,21,419	0/1:13,2:11:54.60:87,0,55	0/1:20,2:14:99:113,0,110	0/0:16,0:1:3.01:0,3,66	0/0:47,0:47:99:0,129,2666	0/1:53,4:32:99:143,0,818	0/1:11,1:9:9.96:10,0,60	0/1:27,2:26:41.04:170,0,41	0/0:31,0:30:87.28:0,87,1815	0/1:23,3:23:99:139,0,121	0/1:22,5:26:99:246,0,152	0/1:19,7:24:99:208,0,103	0/1:5,1:3:41.38:41,0,59	0/1:12,1:13:62.35:92,0,62	0/1:20,0:6:10.93:11,0,98	0/1:14,1:11:60.16:100,0,60	0/1:39,0:26:91.86:92,0,208	1/1:8,0:6:7.65:55,8,0	0/0:5,0:4:12.04:0,12,242	0/0:58,0:57:99:0,156,3233	0/1:16,0:14:44.63:45,0,181	0/1:38,4:28:99:226,0,496	0/1:17,0:14:75.09:75,0,234	1/1:8,0:8:12.33:79,12,0
chr10	65454253	.	CAAT	C	3612.65	PASS	AB=0.811;AC=24;AF=0.429;AN=56;BaseQRankSum=14.392;DP=628;FS=72.602;HRun=0;HaplotypeScore=158.6888;InbreedingCoeff=-0.2370;MQ=37.41;MQ0=43;MQRankSum=-13.312;QD=9.51;ReadPosRankSum=-1.590;VQSLOD=0.5727;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:12,4:12:20.93:219,21,0	1/1:4,0:4:2.75:20,3,0	0/0:43,0:10:29.87:0,30,450	0/0:43,0:6:11.82:0,12,111	0/0:10,0:7:21.07:0,21,476	0/1:8,6:11:52.31:128,0,52	0/1:11,10:15:97.42:193,0,97	0/0:14,0:1:3.01:0,3,71	0/0:45,0:45:99:0,135,2931	0/1:42,8:31:99:154,0,845	0/1:7,4:10:41.41:41,0,61	0/1:22,5:26:12.28:332,0,12	0/0:29,1:29:84.29:0,84,1926	0/1:20,5:23:86.80:306,0,87	0/1:19,7:25:99:392,0,136	0/1:19,3:22:63.40:281,0,63	0/1:7,0:4:22.44:22,0,64	0/1:10,4:14:46.99:167,0,47	0/1:12,2:5:42.93:43,0,119	0/1:12,3:12:55.64:190,0,56	0/1:23,6:19:99:208,0,219	1/1:5,3:6:5.53:96,6,0	0/0:8,0:5:15.02:0,15,261	0/0:55,0:54:99:0,156,3468	0/1:12,5:15:99:135,0,154	0/1:26,8:25:99:265,0,503	0/1:10,4:12:99:179,0,242	1/1:3,6:9:26.72:242,27,0
chr10	65455854	.	CAAGGCAGGG	C	22991.54	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=14.765;DP=625;FS=0.782;HRun=0;HaplotypeScore=205.9793;InbreedingCoeff=0.9250;MQ=84.80;MQ0=0;MQRankSum=-15.804;QD=49.34;ReadPosRankSum=2.871;VQSLOD=4.2064;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,18:29:42.10:1121,42,0	1/1:1,5:6:6.02:179,6,0	0/0:26,0:26:63.52:0,64,2761	0/0:29,0:29:81.27:0,81,3371	0/0:13,0:13:33.11:0,33,1511	1/1:5,15:20:30.06:821,30,0	1/1:6,27:33:66.22:1857,66,0	1/1:13,25:38:74.93:1420,75,0	0/0:25,0:25:69.24:0,69,3126	1/1:2,6:8:18.06:496,18,0	1/1:1,3:4:6.02:174,6,0	1/1:7,34:41:90.31:2571,90,0	0/0:26,0:26:72.25:0,72,3317	1/1:4,23:27:60.21:1779,60,0	1/1:1,36:37:93.32:2758,93,0	1/1:4,21:25:54.19:1600,54,0	1/1:5,25:30:57.20:1696,57,0	1/1:4,11:15:18.06:536,18,0	1/1:5,10:15:30.03:633,30,0	1/1:4,9:13:18.06:536,18,0	1/1:17,26:43:19.91:494,20,0	1/1:8,9:17:18.06:532,18,0	0/0:8,0:8:21.07:0,21,921	0/0:32,0:32:90.31:0,90,4095	1/1:3,14:17:30.05:819,30,0	1/1:3,13:16:36.11:1007,36,0	1/1:4,26:30:63.22:1875,63,0	1/1:1,0:2:3.01:89,3,0
chr10	65456185	.	TAA	T	9726.14	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=11.231;DP=661;FS=4.461;HRun=4;HaplotypeScore=200.1549;InbreedingCoeff=0.9830;MQ=58.16;MQ0=12;MQRankSum=-5.464;QD=18.70;ReadPosRankSum=0.750;VQSLOD=1.8119;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:34,13:47:99:909,104,0	1/1:4,5:9:26.96:290,27,0	0/0:24,0:14:38.98:0,39,367	0/0:21,0:11:25.99:0,26,254	0/0:10,0:9:13.25:0,13,117	1/1:13,1:14:32.75:274,33,0	1/1:4,27:31:26.42:163,26,0	1/1:42,0:40:99:872,113,0	0/0:19,0:19:27.07:0,27,367	1/1:14,1:15:39.74:350,40,0	1/1:11,0:11:14.97:123,15,0	1/1:21,6:27:64.41:635,64,0	0/0:19,0:19:50.99:0,51,586	1/1:24,5:29:73.87:562,74,0	1/1:23,13:36:99:897,101,0	1/1:16,7:23:62.51:557,63,0	1/1:3,20:23:20.98:259,21,0	1/1:18,5:23:50.70:453,51,0	1/1:1,13:13:38.83:335,39,0	1/1:3,19:21:31.28:312,31,0	1/1:57,8:64:99:956,127,0	1/1:1,20:21:23.42:186,23,0	0/0:7,0:7:17.98:0,18,210	0/0:41,0:41:99:0,108,1392	1/1:15,5:19:47.96:395,48,0	1/1:16,4:20:50.35:510,50,0	1/1:17,7:24:64.77:588,65,0	1/1:3,1:4:11.66:99,12,0
chr10	65456186	.	AAAAC	A	6969.47	PASS	AB=0.986;AC=39;AF=0.696;AN=56;BaseQRankSum=10.236;DP=678;FS=6.674;HRun=0;HaplotypeScore=232.1310;InbreedingCoeff=0.7382;MQ=57.80;MQ0=12;MQRankSum=-4.392;QD=13.22;ReadPosRankSum=0.816;VQSLOD=3.5889;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:48,0:48:34.83:561,35,0	1/1:9,0:9:15.57:94,16,0	0/0:24,0:14:38.99:0,39,368	0/0:21,0:11:25.99:0,26,254	0/0:13,0:12:3.51:0,4,158	0/1:15,0:15:1.74:134,0,2	1/1:27,2:29:26.42:195,26,0	1/1:43,0:41:86.33:806,86,0	0/0:19,0:19:33.05:0,33,454	1/1:7,7:14:38.67:519,39,0	1/1:9,2:11:14.97:123,15,0	1/1:27,1:28:62.44:451,62,0	0/0:22,0:21:60.04:0,60,882	1/1:29,0:29:58.60:434,59,0	1/1:37,0:37:95.26:652,95,0	1/1:23,0:23:55.65:408,56,0	1/1:22,1:23:16.61:67,17,0	1/1:23,0:23:48.93:318,49,0	1/1:15,0:14:21.08:194,21,0	1/1:23,0:22:1.83:196,2,0	1/1:65,0:64:85.26:680,85,0	1/1:21,0:21:23.08:127,23,0	0/0:7,0:7:17.98:0,18,265	0/0:45,0:45:99:0,118,1981	1/1:19,1:19:25.82:307,26,0	0/1:22,1:23:15.13:311,0,15	1/1:24,0:24:61.28:389,61,0	0/1:4,0:4:4.27:4,0,14
chr10	65456188	.	AAC	A	1954.86	PASS	AB=0.995;AC=34;AF=0.680;AN=50;BaseQRankSum=5.426;DP=761;FS=5.800;HRun=0;HaplotypeScore=274.3235;InbreedingCoeff=0.0494;MQ=54.33;MQ0=13;MQRankSum=-2.045;QD=3.35;ReadPosRankSum=2.203;VQSLOD=1.5344;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:58,0:58:15.97:139,0,16	1/1:11,0:11:20.49:141,20,0	./.	./.	1/1:6,7:12:9.40:72,9,0	1/1:19,0:19:6.73:86,7,0	1/1:33,0:33:2.60:10,3,0	0/0:49,0:47:13.07:0,13,78	0/1:18,1:19:23.77:129,0,24	0/1:18,0:18:37.05:113,0,37	./.	1/1:31,0:31:17.86:179,18,0	0/0:22,0:21:23.89:0,24,272	0/1:36,0:36:6.13:77,0,6	1/1:43,0:43:34.44:224,34,0	1/1:26,0:26:15.29:120,15,0	1/1:25,0:24:14.86:115,15,0	0/1:26,0:26:7.67:82,0,8	0/1:17,0:16:6.19:47,0,6	1/1:26,0:25:14.07:80,14,0	0/1:67,0:66:12.25:57,0,12	1/1:23,0:23:5.65:42,6,0	0/1:7,0:7:8.80:9,0,80	0/0:49,0:49:33.51:0,34,760	0/1:22,0:21:16.66:53,0,17	0/1:31,0:31:74.79:115,0,75	1/1:28,0:28:6.64:169,7,0	1/1:5,0:5:5.94:57,6,0
chr10	65456196	.	C	CAAACAT	11095.15	PASS	AB=0.986;AC=33;AF=0.589;AN=56;BaseQRankSum=7.760;DP=819;FS=37.375;HRun=0;HaplotypeScore=314.4915;InbreedingCoeff=0.4937;MQ=49.38;MQ0=18;MQRankSum=-6.970;QD=17.28;ReadPosRankSum=-3.493;VQSLOD=2.9358;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:55,1:56:28.01:963,28,0	1/1:9,1:10:7.25:189,7,0	0/0:23,0:12:19.33:0,19,274	0/0:19,0:8:18.06:0,18,290	0/0:14,0:13:22.40:0,22,316	0/1:23,0:23:16.42:435,0,16	0/1:32,0:32:33.54:176,0,34	1/1:48,0:43:94.81:1606,95,0	0/0:20,0:20:47.05:0,47,702	0/1:24,0:24:99:210,0,238	0/0:8,0:12:5.98:0,6,46	1/1:29,4:33:44.93:609,45,0	0/0:23,0:22:55.65:0,56,841	1/1:37,2:40:24.94:777,25,0	1/1:46,1:47:66.67:973,67,0	1/1:25,2:27:51.84:623,52,0	0/1:27,0:26:63.63:109,0,64	0/1:29,0:28:3.07:526,0,3	0/1:20,0:19:1.49:428,0,1	1/1:28,0:28:12.18:175,12,0	1/1:83,0:82:14.45:1051,14,0	1/1:22,1:22:20.60:132,21,0	0/0:10,0:10:23.77:0,24,345	0/0:56,0:56:99:0,139,2422	1/1:19,2:20:29.06:447,29,0	0/1:30,1:32:99:840,0,119	1/1:31,1:32:27.40:640,27,0	1/1:5,0:5:12:186,12,0
chr10	65456225	.	A	AGG	3696.23	PASS	AB=0.803;AC=20;AF=0.357;AN=56;BaseQRankSum=4.779;DP=904;FS=4.604;HRun=0;HaplotypeScore=288.3367;InbreedingCoeff=-0.5620;MQ=46.81;MQ0=27;MQRankSum=-7.936;QD=5.58;ReadPosRankSum=3.224;VQSLOD=2.7689;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:25,25:50:47.39:47,0,452	0/1:7,7:14:80.08:80,0,188	0/0:46,0:17:29.49:0,29,526	0/0:51,0:22:36.97:0,37,676	0/0:18,0:17:32.89:0,33,433	0/1:22,4:26:99:329,0,149	0/1:29,2:30:50.64:123,0,51	0/1:51,0:47:99:446,0,751	0/0:22,0:22:57.13:0,57,742	0/1:17,14:30:95.14:465,0,95	0/0:6,8:15:2.99:0,3,32	0/1:18,17:35:99:177,0,290	0/0:21,0:19:54.18:0,54,828	0/1:18,15:33:99:140,0,169	0/1:25,24:49:99:139,0,301	0/1:18,16:35:61.82:62,0,271	0/1:22,1:22:94.82:95,0,212	0/1:24,0:23:99:124,0,203	0/1:27,0:26:99:252,0,432	0/1:27,2:28:99:106,0,105	0/1:50,41:90:6.41:6,0,527	0/1:17,1:17:53.04:212,0,53	0/0:19,0:18:48.16:0,48,730	0/0:50,0:50:99:0,126,1918	0/1:10,13:22:73:73,0,104	0/1:15,23:39:99:643,0,360	0/1:16,9:25:99:136,0,288	0/1:7,0:7:41.93:42,0,137
chr10	65458020	.	T	TAGCCTTGCCTATAACACA	72277.55	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=-2.956;DP=696;FS=0.756;HRun=0;HaplotypeScore=235.5917;InbreedingCoeff=0.9857;MQ=57.04;MQ0=7;MQRankSum=-15.088;QD=131.41;ReadPosRankSum=-0.663;VQSLOD=4.4630;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,14:38:63.22:4903,63,0	1/1:5,4:12:23.82:1641,24,0	0/0:13,0:13:36.12:0,36,1301	0/0:23,0:23:66.12:0,66,2354	0/0:23,0:23:60.17:0,60,2453	1/1:6,7:20:27.09:2295,27,0	1/1:10,5:28:45.15:2814,45,0	1/1:38,0:38:99:5961,102,0	0/0:21,0:21:63.17:0,63,2656	1/1:16,3:29:75.21:4286,75,0	1/1:7,8:21:42.10:3034,42,0	1/1:5,15:29:57.20:4633,57,0	0/0:21,0:21:57.18:0,57,2595	1/1:7,12:31:51.18:3873,51,0	1/1:11,13:37:63.22:4658,63,0	1/1:12,7:29:48.16:3703,48,0	1/1:6,2:13:15.05:1211,15,0	1/1:1,8:15:27.09:2158,27,0	1/1:8,1:19:51.16:2525,51,0	1/1:23,11:50:99:6770,102,0	1/1:10,4:20:30.10:2034,30,0	1/1:7,7:24:42.10:3202,42,0	0/0:19,0:19:54.19:0,54,2496	0/0:26,0:26:75.26:0,75,3710	1/1:8,7:20:36.12:3014,36,0	1/1:7,7:28:78.14:4646,78,0	1/1:13,7:35:60.21:4136,60,0	1/1:1,2:6:9.03:781,9,0
chr10	65458022	.	G	GC	3714.04	PASS	AB=0.961;AC=30;AF=0.536;AN=56;BaseQRankSum=16.717;DP=527;FS=5.994;HRun=1;HaplotypeScore=298.4632;InbreedingCoeff=0.1862;MQ=59.88;MQ0=7;MQRankSum=-14.620;QD=9.65;ReadPosRankSum=6.808;VQSLOD=1.6173;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:29,1:28:23.24:342,23,0	1/1:8,0:8:11.82:65,12,0	0/0:12,0:12:36.12:0,36,467	0/0:23,0:23:69.21:0,69,861	0/0:21,0:21:60.19:0,60,767	1/1:11,0:10:24.28:115,24,0	0/1:19,0:19:0.17:102,0,0	0/1:17,19:36:29.94:821,0,30	0/0:21,0:21:63.20:0,63,818	0/1:25,0:25:85.11:85,0,115	0/1:16,0:16:17.15:165,0,17	1/1:22,0:22:22.80:192,23,0	0/0:20,0:20:57.19:0,57,740	1/1:22,0:22:38.42:191,38,0	1/1:24,0:24:12.71:177,13,0	0/1:19,0:17:8.85:156,0,9	0/1:9,1:9:28.11:28,0,53	0/1:10,0:10:3.89:73,0,4	0/1:9,0:9:22.50:23,0,35	0/1:35,1:36:44.99:358,0,45	0/1:15,0:14:11.06:269,0,11	1/1:15,0:15:16.65:124,17,0	0/0:19,0:19:57.19:0,57,740	0/0:26,0:26:75.24:0,75,974	0/1:17,0:16:36.79:105,0,37	0/1:15,0:15:39.63:102,0,40	1/1:23,0:23:24.79:183,25,0	1/1:3,0:3:8.18:37,8,0
chr10	65458239	.	ACTGTGACCCTGGCT	A	2702.74	PASS	AB=0.923;AC=5;AF=0.089;AN=56;BaseQRankSum=8.555;DP=557;FS=9.516;HRun=0;HaplotypeScore=210.6751;InbreedingCoeff=0.7631;MQ=89.97;MQ0=1;MQRankSum=-5.276;QD=55.16;ReadPosRankSum=1.817;VQSLOD=2.1033;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,129,8064	0/0:6,0:6:15.05:0,15,683	0/0:22,0:22:31.31:0,31,3182	0/0:24,0:24:69.43:0,69,2998	0/0:21,0:21:63.22:0,63,3633	0/0:18,0:18:51.16:0,51,2979	0/0:25,0:25:75.26:0,75,3823	0/0:28,0:28:84.22:0,84,4113	0/0:20,0:20:60.19:0,60,3828	1/1:0,15:15:45.04:1446,45,0	1/1:0,10:10:27.09:1193,27,0	0/0:21,0:21:63.22:0,63,4242	0/0:17,0:17:51.18:0,51,3287	0/0:17,0:17:48.14:0,48,3065	0/0:26,0:26:75.26:0,75,4243	0/0:30,0:30:84.29:0,84,5324	0/0:26,0:26:78.27:0,78,4947	0/0:13,0:13:39.13:0,39,2780	0/0:18,0:18:51.15:0,51,2659	0/0:8,0:8:24.08:0,24,1636	0/0:33,0:32:96.31:0,96,5765	0/0:17,0:17:51.18:0,51,3168	0/0:10,0:10:30.10:0,30,1983	0/0:18,0:18:54.19:0,54,3470	0/0:17,0:17:51.18:0,51,3468	0/1:22,2:24:99:193,0,4413	0/0:25,0:25:72.23:0,72,4260	0/0:4,0:4:12.04:0,12,531
chr10	65458729	.	C	CTTT	7875.50	PASS	AB=0.786;AC=36;AF=0.643;AN=56;BaseQRankSum=-7.704;DP=408;FS=4.407;HRun=10;HaplotypeScore=54.3077;InbreedingCoeff=0.7980;MQ=68.70;MQ0=1;MQRankSum=0.343;QD=29.94;ReadPosRankSum=2.006;VQSLOD=3.4695;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,14:20:36.12:692,36,0	1/1:1,4:6:6.91:118,7,0	0/1:16,0:12:5.78:6,0,112	0/0:14,0:9:7.94:0,8,71	0/0:18,0:18:51.08:0,51,599	1/1:3,14:17:33.11:635,33,0	1/1:2,2:5:10.56:142,11,0	0/0:33,0:34:68.99:0,69,793	0/0:11,0:11:30.07:0,30,362	0/0:24,0:24:63.15:0,63,760	0/0:14,0:15:39.03:0,39,455	1/1:5,6:12:9.03:173,9,0	0/0:15,0:15:27.06:0,27,328	1/1:1,6:7:15.05:284,15,0	1/1:0,7:7:12.04:227,12,0	1/1:6,9:16:24.06:427,24,0	1/1:4,25:31:60.18:1119,60,0	0/1:6,17:24:3.35:544,0,3	1/1:2,5:7:15.03:254,15,0	1/1:2,10:11:25.33:463,25,0	1/1:4,2:6:6.91:113,7,0	1/1:2,2:4:5.98:74,6,0	0/0:8,0:8:14.97:0,15,182	0/0:5,0:6:8.95:0,9,91	1/1:3,14:19:30.08:535,30,0	1/1:4,10:15:33.04:512,33,0	1/1:9,15:27:63.12:1040,63,0	1/1:1,9:11:27.09:519,27,0
chr10	65458993	.	GGGGTGTA	G	6962.64	PASS	AB=0.532;AC=40;AF=0.714;AN=56;BaseQRankSum=3.509;DP=343;FS=18.688;HRun=0;HaplotypeScore=82.9536;InbreedingCoeff=0.7134;MQ=65.17;MQ0=5;MQRankSum=-6.964;QD=29.63;ReadPosRankSum=7.369;VQSLOD=2.7652;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,23:23:8.89:226,9,0	1/1:0,9:9:14.98:328,15,0	0/0:23,0:16:38.21:0,38,642	0/0:26,0:19:21.25:0,21,823	0/0:14,0:14:27.08:0,27,675	1/1:0,11:11:24.08:559,24,0	1/1:1,8:9:12.01:256,12,0	1/1:8,1:9:25.32:390,25,0	0/0:12,0:12:33.10:0,33,899	1/1:11,0:11:15:186,15,0	1/1:6,0:6:6.01:65,6,0	1/1:1,13:14:15.03:335,15,0	0/0:8,0:7:9.03:0,9,278	1/1:0,10:10:15.05:374,15,0	1/1:0,8:7:6.02:109,6,0	0/1:2,10:12:80.75:212,0,81	0/1:1,13:13:44.15:466,0,44	1/1:2,3:5:12.04:299,12,0	1/1:1,9:10:30.04:556,30,0	1/1:0,8:8:12.03:279,12,0	1/1:4,13:17:11.99:247,12,0	1/1:1,6:7:12.04:279,12,0	0/0:7,0:6:15.05:0,15,407	0/0:18,0:18:42.06:0,42,1134	1/1:1,15:16:36.12:823,36,0	1/1:1,13:14:27.09:595,27,0	1/1:0,12:11:9.03:227,9,0	1/1:0,10:10:6.02:151,6,0
chr10	65458994	.	GGGTGTA	G	5398.86	PASS	AB=0.962;AC=40;AF=0.714;AN=56;BaseQRankSum=4.597;DP=336;FS=16.869;HRun=0;HaplotypeScore=81.7559;InbreedingCoeff=0.7138;MQ=62.55;MQ0=4;MQRankSum=-6.887;QD=23.17;ReadPosRankSum=7.097;VQSLOD=2.2401;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:23:8.90:148,9,0	1/1:9,0:9:14.79:251,15,0	0/0:21,0:14:33.99:0,34,556	0/0:24,0:18:31.50:0,31,733	0/0:15,0:15:36.11:0,36,822	1/1:11,0:11:24.08:403,24,0	1/1:8,1:9:12.03:204,12,0	1/1:2,7:9:27.09:496,27,0	0/0:11,0:11:30.10:0,30,796	1/1:1,10:11:15.02:285,15,0	1/1:3,3:6:6.02:131,6,0	1/1:14,0:14:15.04:231,15,0	0/0:8,0:7:9.03:0,9,247	1/1:10,0:10:15.05:244,15,0	1/1:8,0:7:6.02:83,6,0	0/1:11,0:12:66.55:134,0,67	0/1:14,0:13:44.01:311,0,44	1/1:4,0:5:12.04:195,12,0	1/1:10,0:10:25.32:384,25,0	1/1:8,0:8:12.03:201,12,0	1/1:14,0:15:11.97:189,12,0	1/1:6,0:7:12.04:201,12,0	0/0:7,0:6:15.05:0,15,392	0/0:17,0:17:42.10:0,42,1090	1/1:15,1:16:36.12:596,36,0	1/1:14,0:14:27.09:465,27,0	1/1:12,0:11:8.96:148,9,0	1/1:10,0:10:6.02:99,6,0
chr10	65458995	.	GGTGTAT	G	3807.01	PASS	AB=0.972;AC=39;AF=0.696;AN=56;BaseQRankSum=7.117;DP=336;FS=24.253;HRun=0;HaplotypeScore=87.3030;InbreedingCoeff=0.6447;MQ=61.50;MQ0=3;MQRankSum=-6.751;QD=16.34;ReadPosRankSum=7.078;VQSLOD=0.6432;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:23:8.96:101,9,0	1/1:9,0:9:14.79:174,15,0	0/0:18,0:13:21.52:0,22,517	0/0:24,0:19:34.80:0,35,889	0/0:17,0:17:42.11:0,42,1118	1/1:11,0:11:24.07:277,24,0	1/1:9,0:9:12.04:145,12,0	1/1:8,1:9:27.06:369,27,0	0/0:12,0:12:30.10:0,30,869	0/1:10,1:11:6.01:177,0,6	1/1:4,2:6:6.02:130,6,0	1/1:14,0:14:15.03:168,15,0	0/0:8,0:7:9.03:0,9,271	1/1:10,0:10:15.05:193,15,0	1/1:8,0:7:5.85:49,6,0	0/1:12,0:12:76.56:101,0,77	0/1:14,0:13:60.55:212,0,61	1/1:5,0:5:12.03:146,12,0	1/1:9,0:10:26.58:277,27,0	1/1:8,0:8:12.03:136,12,0	1/1:15,0:15:11.95:143,12,0	1/1:7,0:7:12.04:150,12,0	0/0:7,0:6:15.05:0,15,438	0/0:17,0:17:39.13:0,39,1154	1/1:16,0:16:36.04:429,36,0	1/1:14,0:14:7.07:261,7,0	1/1:12,0:11:8.81:102,9,0	1/1:10,0:10:6.02:67,6,0
chr10	65459155	.	C	CAGCTTGCTTCTGGGTAAC	31231.74	PASS	AB=0.916;AC=51;AF=0.911;AN=56;BaseQRankSum=-6.068;DP=300;FS=6.934;HRun=0;HaplotypeScore=353.0680;InbreedingCoeff=-0.1246;MQ=64.58;MQ0=4;MQRankSum=0.460;QD=104.11;ReadPosRankSum=-0.737;VQSLOD=3.4532;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:19:27:2162,27,0	1/1:3,0:3:9.03:475,9,0	0/1:6,0:8:40.86:536,0,41	0/1:5,1:7:7.73:553,0,8	1/1:17,0:17:32.45:1968,32,0	1/1:7,0:7:3.38:307,3,0	1/1:10,0:10:18.40:1152,18,0	1/1:13,0:13:39.13:2025,39,0	1/1:14,0:14:11.26:1557,11,0	1/1:15,0:15:20.38:1777,20,0	1/1:9,0:9:15.82:1450,16,0	0/1:14,0:14:10.27:1546,0,10	1/1:13,0:12:13.91:894,14,0	1/1:9,0:8:4.06:722,4,0	0/1:9,0:9:60.53:303,0,61	1/1:13,0:13:7.35:1045,7,0	1/1:6,0:5:12.04:462,12,0	1/1:5,0:5:8.95:406,9,0	1/1:12,0:12:8.23:854,8,0	1/1:13,0:13:39.09:1952,39,0	1/1:6,0:6:12.04:678,12,0	1/1:15,0:15:34.64:1740,35,0	1/1:16,0:16:34.01:2127,34,0	1/1:7,0:7:9:276,9,0	0/1:3,0:3:6.86:74,0,7	1/1:15,0:14:10.12:1439,10,0	1/1:13,0:12:29.70:1680,30,0	1/1:9,0:9:17.02:1070,17,0
chr10	65459500	.	TC	T	13621.84	PASS	AB=0.885;AC=55;AF=0.982;AN=56;BaseQRankSum=-1.713;DP=465;FS=3.393;HRun=2;HaplotypeScore=49.9183;InbreedingCoeff=-0.0205;MQ=46.79;MQ0=12;MQRankSum=-1.732;QD=29.29;ReadPosRankSum=1.111;VQSLOD=4.4601;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,34:33:75.24:960,75,0	1/1:0,9:9:27.09:350,27,0	1/1:20,5:3:2.99:23,3,0	0/1:20,3:3:25.14:50,0,25	1/1:0,19:19:48.11:601,48,0	1/1:0,16:16:45.15:581,45,0	1/1:0,19:19:45.15:584,45,0	1/1:1,20:21:60.17:752,60,0	1/1:0,18:18:48.16:623,48,0	1/1:1,21:22:57.18:727,57,0	1/1:0,11:11:30.10:389,30,0	1/1:1,11:12:30.10:382,30,0	1/1:0,13:13:36.12:467,36,0	1/1:2,11:13:24.08:311,24,0	1/1:0,16:15:39.13:506,39,0	1/1:0,17:17:48.16:622,48,0	1/1:0,20:19:39.13:506,39,0	1/1:2,13:15:33.11:424,33,0	1/1:0,17:17:51.09:625,51,0	1/1:1,10:11:30.10:389,30,0	1/1:1,17:18:45.12:567,45,0	1/1:0,6:6:15.05:194,15,0	1/1:0,9:9:27.09:350,27,0	1/1:0,20:20:54.05:659,54,0	1/1:0,8:8:18.06:234,18,0	1/1:3,20:23:60.19:775,60,0	1/1:0,19:19:48.16:620,48,0	1/1:0,10:9:27.09:350,27,0
chr10	65459617	.	A	AAAAT	289.77	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=-1.836;DP=452;FS=18.291;HRun=0;HaplotypeScore=123.4271;InbreedingCoeff=0.6418;MQ=65.37;MQ0=1;MQRankSum=-1.581;QD=6.90;ReadPosRankSum=-3.085;VQSLOD=0.5319;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:66.06:0,66,721	0/0:10,0:10:24.07:0,24,277	0/1:20,0:9:3.16:3,0,203	0/0:8,0:7:9.75:0,10,161	0/0:21,0:21:63.22:0,63,1088	0/0:23,0:23:54.15:0,54,638	0/0:6,0:6:18.01:0,18,193	1/1:16,5:22:15.05:378,15,0	0/0:11,0:11:24.08:0,24,415	0/0:14,0:14:32.62:0,33,250	0/0:21,0:21:50.05:0,50,312	0/0:13,0:13:36.11:0,36,415	0/0:12,0:12:30.10:0,30,504	0/0:17,0:17:36.06:0,36,414	0/0:24,0:23:50.94:0,51,587	0/0:13,0:13:27.05:0,27,297	0/0:25,0:24:45.10:0,45,496	0/0:18,0:18:39.12:0,39,477	0/0:16,0:16:39.12:0,39,491	0/0:30,0:29:72.21:0,72,854	0/0:11,0:10:21.06:0,21,242	0/0:8,0:8:15.04:0,15,173	0/0:13,0:13:30.10:0,30,517	0/0:4,0:4:9.03:0,9,154	0/0:11,0:10:18:0,18,193	0/0:24,0:24:63.11:0,63,740	0/0:17,0:17:33.05:0,33,380	0/0:10,0:10:27.03:0,27,297
chr10	65459628	.	AT	A	8317.52	PASS	AB=1.000;AC=37;AF=0.661;AN=56;BaseQRankSum=3.325;DP=441;FS=0.845;HRun=6;HaplotypeScore=71.3600;InbreedingCoeff=0.9050;MQ=66.16;MQ0=0;MQRankSum=0.034;QD=26.16;ReadPosRankSum=2.070;VQSLOD=5.1570;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,26:29:69.29:704,69,0	1/1:0,9:9:27.07:290,27,0	0/1:13,0:8:20.52:31,0,21	0/0:6,0:7:9.58:0,10,85	0/0:22,0:22:66.21:0,66,867	1/1:1,23:24:63.16:676,63,0	1/1:0,7:7:21.05:225,21,0	0/0:19,0:19:44.92:0,45,476	0/0:9,0:9:27.06:0,27,325	0/0:0,0:17:49.54:0,50,302	0/0:1,0:21:54.89:0,55,314	1/1:0,16:16:45.11:483,45,0	0/0:11,0:11:30.08:0,30,368	1/1:3,13:16:48.08:492,48,0	1/1:0,22:22:51.13:548,51,0	1/1:0,13:13:33.08:354,33,0	1/1:1,24:24:54.14:579,54,0	1/1:2,17:19:39.10:418,39,0	1/1:3,11:14:33.08:354,33,0	1/1:1,28:29:81.14:846,81,0	1/1:0,7:7:21.05:225,21,0	1/1:1,6:7:18.05:193,18,0	0/0:12,0:12:33.09:0,33,419	0/0:5,0:5:12.04:0,12,157	1/1:0,11:11:30.08:322,30,0	1/1:1,22:24:54.24:663,54,0	1/1:1,16:17:42.10:451,42,0	1/1:1,15:16:29.34:464,29,0
chr10	65460243	.	TTA	T	3442.17	PASS	AB=0.613;AC=32;AF=0.571;AN=56;BaseQRankSum=11.899;DP=372;FS=13.428;HRun=0;HaplotypeScore=53.4679;InbreedingCoeff=0.7255;MQ=54.85;MQ0=18;MQRankSum=-4.997;QD=24.76;ReadPosRankSum=5.866;VQSLOD=3.3149;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,16:16:30.10:412,30,0	1/1:1,2:2:6.02:82,6,0	0/0:10,0:9:15.05:0,15,240	0/0:9,0:2:6:0,6,75	0/0:33,0:31:78.27:0,78,1384	0/1:3,6:6:11.43:109,0,11	1/1:0,14:14:15.05:206,15,0	0/0:22,0:20:51.12:0,51,825	0/0:21,0:21:60.21:0,60,1064	0/0:42,0:40:99:0,120,2074	0/0:29,0:26:69.22:0,69,1191	1/1:1,3:3:6.02:82,6,0	0/0:19,0:19:54.19:0,54,956	0/0:4,2:4:2.88:0,3,15	1/1:2,4:5:12.04:165,12,0	1/1:3,7:10:3.50:230,3,0	1/1:3,9:11:7.31:310,7,0	1/1:1,7:7:18.06:247,18,0	1/1:1,8:8:21.07:288,21,0	1/1:2,9:10:24.08:330,24,0	1/1:1,7:8:21.07:288,21,0	1/1:1,2:2:6.02:82,6,0	0/0:19,0:18:48.16:0,48,836	0/0:23,0:23:60.21:0,60,1063	1/1:1,13:13:27.09:371,27,0	1/1:2,4:4:9.03:124,9,0	0/1:2,3:5:2.74:74,0,3	1/1:0,1:1:3.01:41,3,0
chr10	65460727	.	GT	G	2711.91	PASS	AB=1.000;AC=39;AF=0.750;AN=52;BaseQRankSum=6.969;DP=314;FS=1.751;HRun=2;HaplotypeScore=86.5090;InbreedingCoeff=0.7533;MQ=67.87;MQ0=4;MQRankSum=-6.038;QD=11.07;ReadPosRankSum=4.307;VQSLOD=2.1266;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:20,1:18:26.84:199,27,0	1/1:2,0:2:2.98:22,3,0	0/0:22,0:17:16.58:0,17,229	0/0:18,0:13:22.44:0,22,213	0/0:4,0:4:0.89:0,1,2	1/1:8,0:8:17.92:137,18,0	1/1:26,0:21:29.83:219,30,0	1/1:7,3:8:14.80:96,15,0	0/0:4,0:4:2.94:0,3,45	./.	./.	1/1:16,0:15:26.78:203,27,0	0/1:4,0:4:0:0,0,0	1/1:13,0:11:23.87:178,24,0	1/1:11,0:10:14.91:109,15,0	1/1:13,1:13:20.88:155,21,0	1/1:23,0:23:35.84:281,36,0	1/1:12,0:9:23.89:182,24,0	1/1:13,0:12:29.95:257,30,0	1/1:5,0:5:8.95:65,9,0	1/1:23,0:20:14.32:100,14,0	1/1:13,0:12:23.86:175,24,0	0/0:4,0:4:6:0,6,52	0/0:12,0:12:27.77:0,28,305	1/1:3,0:3:2.98:22,3,0	1/1:17,0:15:32.87:260,33,0	1/1:9,0:9:20.91:165,21,0	1/1:2,0:2:5.99:48,6,0
chr10	65460728	.	TTGG	T	6328.50	PASS	AC=38;AF=0.731;AN=52;BaseQRankSum=6.187;DP=309;FS=0.693;HRun=0;HaplotypeScore=79.5135;InbreedingCoeff=0.7898;MQ=68.56;MQ0=4;MQRankSum=-6.015;QD=27.40;ReadPosRankSum=6.298;VQSLOD=4.4368;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,19:17:27:454,27,0	1/1:0,2:2:3.01:54,3,0	0/0:22,0:17:20.32:0,20,373	0/0:19,0:13:23.24:0,23,390	0/0:3,0:3:6.01:0,6,62	1/1:0,7:7:18.06:329,18,0	1/1:0,25:20:30.07:537,30,0	1/1:7,0:7:1.04:64,1,0	0/0:6,0:6:10.82:0,11,130	./.	./.	1/1:0,16:15:27.05:490,27,0	0/0:4,0:4:5.88:0,6,45	1/1:0,11:9:24.08:433,24,0	1/1:0,11:10:15.03:268,15,0	1/1:1,13:13:21.03:378,21,0	1/1:0,23:23:36.09:650,36,0	1/1:1,9:8:24.08:437,24,0	1/1:5,5:11:30.06:409,30,0	1/1:0,5:5:9.02:161,9,0	1/1:1,22:20:15.04:248,15,0	1/1:0,9:12:23.69:430,24,0	0/0:3,0:4:6:0,6,52	0/0:16,0:16:42.07:0,42,610	1/1:0,3:3:2.99:53,3,0	1/1:0,15:14:33.08:531,33,0	1/1:0,8:9:21.07:355,21,0	1/1:2,0:2:5.99:48,6,0
chr10	65460729	.	TG	T	656.14	PASS	AB=0.875;AC=36;AF=0.720;AN=50;BaseQRankSum=7.476;DP=317;FS=1.987;HRun=11;HaplotypeScore=97.8488;InbreedingCoeff=0.6468;MQ=68.17;MQ0=4;MQRankSum=-5.354;QD=2.85;ReadPosRankSum=5.731;VQSLOD=-0.4913;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:17:17.74:53,18,0	1/1:2,0:2:2.22:7,2,0	0/0:22,0:17:14.96:0,15,145	0/0:19,0:13:20.78:0,21,194	0/1:2,1:3:18.16:19,0,18	1/1:7,0:7:13.32:40,13,0	1/1:25,0:20:22.19:65,22,0	0/0:9,0:7:2.37:0,2,8	0/0:5,2:7:9.88:0,10,83	./.	./.	1/1:16,0:15:19.96:60,20,0	0/0:6,0:6:4.19:0,4,28	1/1:11,0:9:17.40:53,17,0	1/1:11,0:10:11.09:33,11,0	1/1:14,0:13:15.16:46,15,0	1/1:23,0:23:26.92:88,27,0	1/1:12,0:9:18.23:54,18,0	1/1:11,0:11:14.48:62,14,0	1/1:5,0:5:6.47:20,6,0	1/1:23,0:20:11.10:34,11,0	1/1:13,0:12:17.01:52,17,0	0/1:6,0:6:0:0,0,0	0/0:16,1:17:2.37:0,2,199	1/1:3,0:3:2.21:7,2,0	1/1:16,0:14:20.45:68,20,0	1/1:9,0:9:16.39:55,16,0	./.
chr10	65460801	.	GTC	G	2074.70	PASS	AB=0.989;AC=30;AF=0.556;AN=54;BaseQRankSum=-5.304;DP=415;FS=4.282;HRun=0;HaplotypeScore=74.2831;InbreedingCoeff=0.2052;MQ=50.47;MQ0=52;MQRankSum=-0.605;QD=6.12;ReadPosRankSum=-6.742;VQSLOD=0.5023;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:23:21.97:182,22,0	1/1:3,0:3:7.23:50,7,0	0/1:28,0:3:9.27:9,0,12	0/1:31,0:6:0.29:5,0,0	0/0:9,0:9:14.74:0,15,121	1/1:14,0:13:21.85:188,22,0	0/1:17,1:18:44.95:105,0,45	0/1:19,0:15:34.54:141,0,35	0/0:8,0:8:24.04:0,24,359	0/1:5,0:5:18.77:19,0,26	0/0:9,1:9:2.99:0,3,25	1/1:15,0:15:12.95:160,13,0	0/0:7,0:7:17.95:0,18,204	1/1:17,0:16:23.41:172,23,0	0/1:22,0:21:69.71:103,0,70	1/1:11,2:12:5.20:96,5,0	0/1:28,0:28:57.06:215,0,57	0/1:16,1:12:0.51:94,0,1	0/0:6,0:2:1.44:0,1,7	1/1:6,0:6:1.08:6,1,0	1/1:30,0:21:5.61:163,6,0	0/1:10,0:9:9.77:37,0,10	0/0:12,0:11:24.02:0,24,327	0/0:20,0:19:23.03:0,23,555	./.	0/1:16,0:15:82.04:120,0,82	1/1:12,0:12:31.51:214,32,0	1/1:9,1:8:17.71:167,18,0
chr10	65461268	.	G	GA	6812.29	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-7.924;DP=435;FS=1.512;HRun=10;HaplotypeScore=49.0397;InbreedingCoeff=0.8185;MQ=69.24;MQ0=0;MQRankSum=-0.619;QD=21.56;ReadPosRankSum=1.745;VQSLOD=5.7267;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,29:33:53.51:762,54,0	1/1:1,1:2:3.01:32,3,0	0/0:17,0:16:0.32:0,0,131	0/0:13,0:13:0.94:0,1,109	0/0:16,0:17:6.47:0,6,245	1/1:1,14:16:41.94:430,42,0	1/1:4,13:17:5.43:263,5,0	0/0:33,0:33:71.83:0,72,587	0/0:6,0:6:8.97:0,9,74	1/1:3,0:15:29.47:156,29,0	1/1:5,2:13:14.24:106,14,0	1/1:3,13:16:39.05:403,39,0	0/0:19,0:19:56.94:0,57,468	1/1:3,6:9:21.03:215,21,0	1/1:1,16:17:42.11:448,42,0	1/1:1,13:14:33.08:351,33,0	1/1:10,20:30:63.32:699,63,0	1/1:1,9:10:27.07:288,27,0	1/1:8,20:28:38.52:614,39,0	1/1:1,10:11:27.03:275,27,0	1/1:3,7:10:21.05:223,21,0	1/1:0,7:7:12.03:128,12,0	0/0:4,0:4:8.99:0,9,74	0/0:9,0:9:26.97:0,27,222	1/1:1,15:16:39.10:416,39,0	1/1:8,16:25:32.65:508,33,0	1/1:0,15:14:27.54:288,28,0	1/1:3,8:12:20.89:206,21,0
chr10	65461498	.	CA	C	10219.86	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=7.213;DP=462;FS=2.093;HRun=2;HaplotypeScore=58.9334;InbreedingCoeff=0.9953;MQ=64.12;MQ0=0;MQRankSum=-4.261;QD=35.61;ReadPosRankSum=1.939;VQSLOD=5.4286;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,26:26:63.20:818,63,0	1/1:0,10:10:30.10:389,30,0	0/0:26,0:21:57.18:0,57,798	0/0:28,0:26:78.26:0,78,1140	0/0:25,0:25:75.25:0,75,1124	1/1:1,19:20:57.14:723,57,0	1/1:1,17:18:45.15:584,45,0	1/1:0,25:24:72.23:935,72,0	0/0:11,0:11:30.10:0,30,445	0/0:13,0:13:36.12:0,36,524	0/0:26,0:26:78.26:0,78,1168	1/1:0,16:16:45.15:584,45,0	0/0:9,0:9:27.09:0,27,403	1/1:1,5:6:15.05:195,15,0	1/1:0,12:12:33.11:429,33,0	1/1:0,18:18:54.18:702,54,0	1/1:1,15:16:48.13:606,48,0	1/1:0,17:17:48.16:623,48,0	1/1:1,14:14:36.10:447,36,0	1/1:0,14:14:42.14:545,42,0	1/1:0,18:18:48.16:623,48,0	1/1:1,10:11:27.09:357,27,0	0/0:9,0:9:24.07:0,24,340	0/0:27,0:27:81.27:0,81,1211	1/1:0,12:12:36.12:468,36,0	1/1:0,11:11:33.11:429,33,0	1/1:1,14:15:42.12:531,42,0	1/1:1,6:7:18.06:234,18,0
chr10	65461549	.	TACAC	T	8751.02	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=4.454;DP=555;FS=4.250;HRun=0;HaplotypeScore=117.6219;InbreedingCoeff=0.9308;MQ=57.77;MQ0=9;MQRankSum=2.950;QD=25.66;ReadPosRankSum=2.358;VQSLOD=4.5990;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:21,11:32:42.14:672,42,0	1/1:4,5:9:18.06:286,18,0	0/0:27,0:15:11.70:0,12,148	0/0:29,0:19:15.04:0,15,270	0/0:20,0:20:32.83:0,33,636	1/1:11,13:25:36.51:666,37,0	1/1:14,9:23:36.11:550,36,0	0/0:21,0:18:18.05:0,18,245	0/0:2,0:16:30.19:0,30,135	0/0:19,0:18:42.10:0,42,616	0/0:13,0:21:12.01:0,12,166	1/1:10,8:19:36.06:493,36,0	0/0:15,0:17:35.86:0,36,700	1/1:8,5:13:23.57:342,24,0	1/1:9,11:20:39.13:615,39,0	1/1:17,10:27:41.63:634,42,0	1/1:10,8:19:33.10:494,33,0	1/1:13,9:22:3.29:506,3,0	1/1:14,4:16:18.06:271,18,0	1/1:8,7:16:24.07:364,24,0	1/1:11,7:18:29.93:425,30,0	1/1:6,10:16:36.12:567,36,0	0/0:11,0:11:14.96:0,15,327	0/0:33,0:33:51.17:0,51,1145	1/1:7,6:12:24.08:366,24,0	1/1:15,10:27:44.67:807,45,0	1/1:8,12:21:42.14:645,42,0	1/1:0,3:3:3.01:48,3,0
chr10	65461752	.	A	ATG	24456.14	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-16.555;DP=689;FS=6.380;HRun=0;HaplotypeScore=73.4209;InbreedingCoeff=0.9945;MQ=80.72;MQ0=0;MQRankSum=-3.934;QD=51.16;ReadPosRankSum=3.301;VQSLOD=5.6760;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,27:27:75.26:1448,75,0	1/1:1,7:8:15.05:290,15,0	0/0:20,0:20:49.10:0,49,758	0/0:22,0:22:56.45:0,56,772	0/0:34,0:34:99:0,99,1493	1/1:0,25:25:63.22:1217,63,0	1/1:2,27:29:78.27:1502,78,0	1/1:1,34:37:99:1817,102,0	0/0:20,0:20:60.19:0,60,894	0/0:25,0:25:72.24:0,72,1083	0/0:15,0:15:39.12:0,39,576	1/1:1,18:19:51.17:985,51,0	0/0:22,0:22:66.22:0,66,1010	1/1:0,28:30:78.27:1506,78,0	1/1:0,32:32:84.29:1622,84,0	1/1:1,21:22:57.20:1101,57,0	1/1:0,35:36:93.32:1795,93,0	1/1:1,15:16:42.14:811,42,0	1/1:3,21:26:74.75:1255,75,0	1/1:0,30:31:87.30:1680,87,0	1/1:1,56:57:99:3244,169,0	1/1:2,15:17:45.15:869,45,0	0/0:15,0:15:36.12:0,36,551	0/0:38,0:37:99:0,111,1654	1/1:0,15:15:42.14:811,42,0	1/1:3,19:22:14.26:1054,14,0	1/1:2,16:18:42.14:811,42,0	1/1:0,11:11:33.11:637,33,0
chr10	65462718	.	A	AGGAC	904.04	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-3.769;DP=472;FS=3.702;HRun=0;HaplotypeScore=85.2383;InbreedingCoeff=0.9787;MQ=86.12;MQ0=1;MQRankSum=-6.079;QD=45.20;ReadPosRankSum=-4.192;VQSLOD=2.8265;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:69.22:0,69,1238	0/0:9,0:9:27.09:0,27,497	0/0:15,0:15:39.10:0,39,656	0/0:19,0:20:39.06:0,39,620	0/0:15,0:15:42.12:0,42,741	0/0:15,0:14:36.12:0,36,634	0/0:23,0:22:66.21:0,66,1158	1/1:5,12:19:45.08:999,45,0	0/0:16,0:16:42.14:0,42,772	0/0:8,0:8:18.06:0,18,330	0/0:12,0:12:30.10:0,30,552	0/0:12,0:12:30.10:0,30,552	0/0:19,0:19:48.16:0,48,873	0/0:17,0:17:51.17:0,51,938	0/0:17,0:17:39.12:0,39,689	0/0:15,0:15:30.10:0,30,552	0/0:35,0:34:90.31:0,90,1648	0/0:28,0:28:72.25:0,72,1325	0/0:21,0:21:51.13:0,51,903	0/0:15,0:15:39.13:0,39,717	0/0:18,0:18:48.14:0,48,824	0/0:14,0:14:42.14:0,42,769	0/0:12,0:12:36.12:0,36,662	0/0:20,0:20:42.14:0,42,730	0/0:7,0:7:18.06:0,18,321	0/0:11,0:10:30.10:0,30,552	0/0:21,0:21:63.22:0,63,1159	0/0:8,0:8:24.03:0,24,349
chr10	65462763	.	TGTCC	T	527.43	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=0.921;DP=378;FS=0.000;HRun=0;HaplotypeScore=80.1684;InbreedingCoeff=0.9299;MQ=87.71;MQ0=1;MQRankSum=-4.759;QD=37.67;ReadPosRankSum=-1.864;VQSLOD=3.2986;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:27.09:0,27,622	0/0:8,0:8:24.08:0,24,590	0/0:25,0:20:54.18:0,54,1120	0/0:18,0:16:16.39:0,16,800	0/0:14,0:14:42.14:0,42,1115	0/0:11,0:11:30.09:0,30,761	0/0:11,0:11:30.10:0,30,811	1/1:4,10:14:36.08:622,36,0	0/0:13,0:12:36.12:0,36,913	0/0:16,0:16:45.15:0,45,1232	0/0:9,0:9:24.08:0,24,657	0/0:11,0:11:27.09:0,27,703	0/0:11,0:11:30.10:0,30,706	0/0:11,0:11:27.09:0,27,713	0/0:10,0:9:24.08:0,24,640	0/0:14,0:14:21.05:0,21,575	0/0:23,0:22:54.17:0,54,1361	0/0:15,0:15:42.14:0,42,1054	0/0:24,0:23:60.21:0,60,1576	0/0:10,0:10:30.10:0,30,773	0/0:12,0:12:30.10:0,30,821	0/0:15,0:15:39.13:0,39,1049	0/0:10,0:10:27.09:0,27,698	0/0:16,0:16:42.10:0,42,1029	0/0:5,0:5:15.05:0,15,345	0/0:16,0:15:42.14:0,42,1118	0/0:17,0:17:51.16:0,51,1252	0/0:4,0:4:12.04:0,12,231
chr10	65462896	.	G	GT	1185.87	PASS	AB=0.896;AC=30;AF=0.536;AN=56;BaseQRankSum=-0.026;DP=438;FS=4.813;HRun=16;HaplotypeScore=78.7059;InbreedingCoeff=-0.1091;MQ=62.61;MQ0=14;MQRankSum=2.468;QD=4.19;ReadPosRankSum=-2.092;VQSLOD=0.8886;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:14,5:19:19.33:119,0,19	1/1:5,2:6:8.97:70,9,0	0/0:43,0:15:2.70:0,3,7	0/0:51,0:13:5.43:0,5,23	0/1:22,1:22:6.73:7,0,60	0/1:14,3:17:23.64:101,0,24	1/1:6,2:8:4.78:65,5,0	0/0:9,0:15:7.97:0,8,32	0/0:12,0:12:12.49:0,12,60	0/1:16,0:17:12.99:13,0,17	0/0:12,0:14:12.61:0,13,69	0/1:5,4:9:14.87:78,0,15	0/0:11,0:11:4.93:0,5,33	1/1:4,2:6:2.99:24,3,0	1/1:2,2:4:5.99:48,6,0	0/1:11,1:14:20.70:111,0,21	0/1:14,6:20:0.71:182,0,1	0/1:20,0:19:7.28:7,0,104	0/1:10,0:10:18.26:30,0,18	1/1:17,3:21:2.53:109,3,0	1/1:1,8:8:2.99:24,3,0	1/1:2,5:7:11.92:90,12,0	0/1:14,0:14:9.85:17,0,10	0/1:12,2:13:10.71:11,0,40	0/1:4,1:5:8.36:24,0,8	1/1:10,3:13:7.47:133,7,0	0/1:11,1:13:9.37:52,0,9	0/1:10,0:10:21.50:34,0,22
chr10	65462919	.	TTCTC	T	1200.91	PASS	AB=0.893;AC=32;AF=0.667;AN=48;BaseQRankSum=1.596;DP=321;FS=1.160;HRun=0;HaplotypeScore=55.0141;InbreedingCoeff=0.3842;MQ=45.61;MQ0=32;MQRankSum=-1.675;QD=7.02;ReadPosRankSum=0.664;VQSLOD=1.9172;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:15,1:14:9.03:138,9,0	1/1:5,0:4:5.93:57,6,0	./.	0/0:50,0:9:0:0,0,0	0/0:11,0:9:6.02:0,6,123	1/1:11,3:13:11.94:121,12,0	1/1:4,2:6:5.98:67,6,0	1/1:11,0:10:3.01:38,3,0	1/1:6,0:5:2.75:20,3,0	0/0:11,0:9:8.82:0,9,107	0/0:12,0:11:8.76:0,9,108	1/1:5,1:5:6.02:91,6,0	0/0:5,0:5:3.01:0,3,62	./.	./.	1/1:6,1:7:6.01:72,6,0	1/1:8,6:14:9.03:139,9,0	0/1:16,2:18:40.48:148,0,40	1/1:10,0:9:6.02:86,6,0	1/1:8,2:9:5.98:66,6,0	1/1:7,0:6:3.01:46,3,0	./.	0/0:8,0:7:6.02:0,6,141	0/0:11,0:9:6.02:0,6,139	1/1:2,2:4:3.01:46,3,0	0/1:11,1:11:46.75:84,0,47	1/1:4,5:10:8.97:94,9,0	1/1:14,0:11:3.01:36,3,0
chr10	65462986	.	CTG	C	468.18	PASS	AB=0.920;AC=21;AF=0.389;AN=54;BaseQRankSum=-1.208;DP=387;FS=19.622;HRun=0;HaplotypeScore=72.1704;InbreedingCoeff=-0.0879;MQ=50.18;MQ0=23;MQRankSum=2.325;QD=2.39;ReadPosRankSum=1.649;VQSLOD=0.2694;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:26:54.10:54,0,131	0/0:7,0:7:11.92:0,12,108	./.	0/0:48,0:18:0:0,0,0	0/1:10,2:12:20.65:21,0,113	0/1:12,0:12:25.93:50,0,26	1/1:14,0:14:0.24:87,0,0	0/0:15,0:10:1.25:0,1,3	0/0:8,0:8:9.02:0,9,97	0/1:13,1:9:17.68:18,0,164	0/1:5,2:7:35.71:56,0,36	0/1:7,0:7:10.06:10,0,99	0/0:3,0:3:3.01:0,3,45	0/0:10,0:7:14.86:0,15,153	0/0:11,0:11:2.44:0,2,57	0/1:17,0:16:5.79:6,0,185	0/1:21,0:21:23.91:24,0,139	0/1:9,5:15:28.55:97,0,29	1/1:8,0:6:2.94:18,3,0	1/1:5,0:5:2.47:32,2,0	1/1:14,0:13:8.95:76,9,0	0/0:16,0:15:9.02:0,9,110	0/1:8,2:9:17.71:18,0,141	0/0:19,0:20:12.43:0,12,289	0/0:11,0:11:8.48:0,8,84	0/0:11,0:11:11.75:0,12,94	1/1:5,0:5:3:26,3,0	0/1:8,0:5:22.89:27,0,23
chr10	65463028	.	G	GTGTT	2297.25	PASS	AB=0.967;AC=22;AF=0.393;AN=56;BaseQRankSum=6.105;DP=364;FS=16.401;HRun=0;HaplotypeScore=86.9970;InbreedingCoeff=0.0811;MQ=69.10;MQ0=16;MQRankSum=-1.672;QD=10.84;ReadPosRankSum=-2.632;VQSLOD=1.1665;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:30:17.57:344,0,18	0/1:7,0:7:29.99:30,0,72	0/0:19,0:13:22.78:0,23,250	0/0:22,0:13:38.89:0,39,335	0/0:13,0:13:35.98:0,36,408	0/1:9,0:9:6.25:114,0,6	0/1:20,0:20:8.12:289,0,8	0/0:15,0:12:29.68:0,30,262	1/1:3,9:12:9.50:189,10,0	0/0:12,0:11:30.03:0,30,376	0/0:12,0:12:29.98:0,30,306	0/1:5,0:6:7.98:62,0,8	0/0:2,0:2:6:0,6,84	0/1:8,0:9:31.44:135,0,31	0/1:10,0:10:56.31:89,0,56	0/1:17,0:17:99:142,0,125	0/1:20,0:19:69.09:190,0,69	0/0:12,0:12:29.98:0,30,336	1/1:12,0:9:10.75:162,11,0	1/1:6,0:6:14.33:117,14,0	1/1:21,0:20:42.19:366,42,0	0/1:10,0:10:9.63:85,0,10	0/0:11,0:10:27:0,27,325	0/0:27,0:27:71.75:0,72,794	0/1:7,0:7:29.11:29,0,57	0/1:11,0:11:54.33:107,0,54	1/1:3,0:3:2.84:26,3,0	0/0:7,0:4:7.17:0,7,41
chr10	65463074	.	C	CG	8399.99	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-1.960;DP=449;FS=1.706;HRun=4;HaplotypeScore=55.6303;InbreedingCoeff=0.9477;MQ=100.02;MQ0=0;MQRankSum=-5.770;QD=33.73;ReadPosRankSum=3.856;VQSLOD=5.3780;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,36:37:93.31:1270,93,0	1/1:0,7:7:21.07:287,21,0	0/0:23,0:23:54.10:0,54,596	0/0:28,0:28:65.29:0,65,696	0/0:18,0:18:54.15:0,54,611	1/1:0,20:20:54.18:737,54,0	1/1:2,21:23:57.19:778,57,0	0/0:30,0:30:84.22:0,84,935	0/0:13,0:13:18.05:0,18,203	0/0:14,0:14:42.05:0,42,458	0/0:13,0:13:39.11:0,39,442	1/1:2,6:8:15.05:205,15,0	0/0:4,0:4:12.03:0,12,136	1/1:1,8:9:18.06:246,18,0	1/1:1,11:12:30.10:410,30,0	1/1:3,16:19:45.15:615,45,0	1/1:1,16:17:45.15:615,45,0	0/0:15,0:15:36.08:0,36,397	1/1:3,17:20:51.09:654,51,0	1/1:2,8:10:24.08:328,24,0	1/1:3,23:26:66.22:902,66,0	1/1:1,11:12:27.09:368,27,0	0/0:10,0:10:27.07:0,27,298	0/0:32,0:32:84.18:0,84,927	1/1:0,3:3:3.01:41,3,0	1/1:1,16:17:17.13:621,17,0	1/1:0,7:7:18.06:245,18,0	1/1:0,2:2:6.02:81,6,0
chr10	65463340	.	A	AAGAG	1307.57	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-0.206;DP=588;FS=0.787;HRun=0;HaplotypeScore=189.3768;InbreedingCoeff=0.9645;MQ=86.82;MQ0=0;MQRankSum=-2.318;QD=68.82;ReadPosRankSum=-2.688;VQSLOD=3.5805;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,120,2288	0/0:9,0:9:27.06:0,27,523	0/0:29,0:27:52.59:0,53,1431	0/0:28,0:28:62.29:0,62,1269	0/0:14,0:14:39.12:0,39,745	0/0:22,0:22:63.04:0,63,1186	0/0:30,0:30:75.45:0,75,1550	1/1:1,17:19:57.17:1402,57,0	0/0:25,0:25:75.19:0,75,1370	0/0:14,0:14:42.14:0,42,872	0/0:9,0:9:24.08:0,24,503	0/0:16,0:16:45.15:0,45,934	0/0:10,0:10:30.10:0,30,570	0/0:22,0:22:60.19:0,60,1216	0/0:27,0:27:75.15:0,75,1482	0/0:26,0:26:75.06:0,75,1395	0/0:31,0:31:72.60:0,73,1361	0/0:21,0:21:63.22:0,63,1305	0/0:27,0:27:78.10:0,78,1243	0/0:17,0:17:51.13:0,51,1025	0/0:26,0:26:48.93:0,49,918	0/0:20,0:20:33.38:0,33,1050	0/0:5,0:5:12.01:0,12,209	0/0:36,0:36:99:0,108,2089	0/0:15,0:15:42.14:0,42,878	0/0:15,0:15:45.10:0,45,863	0/0:20,0:20:60.07:0,60,1120	0/0:9,0:9:24.08:0,24,502
chr10	65463371	.	C	CTCTG	13256.27	PASS	AB=0.667;AC=33;AF=0.589;AN=56;BaseQRankSum=13.338;DP=364;FS=14.171;HRun=0;HaplotypeScore=152.6568;InbreedingCoeff=0.9140;MQ=98.54;MQ0=0;MQRankSum=-14.667;QD=74.89;ReadPosRankSum=4.383;VQSLOD=5.6629;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,15:18:51.16:1370,51,0	1/1:2,3:5:15.05:399,15,0	0/0:24,0:23:64.77:0,65,1258	0/0:24,0:25:61.75:0,62,1147	0/0:19,0:19:54.13:0,54,1051	1/1:1,11:12:36.12:983,36,0	1/1:0,7:7:21.07:597,21,0	0/0:14,0:14:42.14:0,42,867	0/0:19,0:19:57.20:0,57,1196	0/0:13,0:13:33.11:0,33,643	0/0:8,0:8:21.06:0,21,402	1/1:1,8:9:27.09:730,27,0	0/0:11,0:11:33.11:0,33,690	1/1:0,16:16:48.16:1363,48,0	1/1:2,9:11:30.10:853,30,0	1/1:2,19:21:63.21:1698,63,0	1/1:3,9:12:27.09:739,27,0	0/0:14,0:14:39.13:0,39,798	1/1:3,4:7:18.04:452,18,0	1/1:2,3:5:15.05:346,15,0	1/1:2,7:9:24.07:549,24,0	1/1:0,5:5:15.05:428,15,0	0/0:7,0:7:18.02:0,18,263	0/0:33,0:33:99:0,99,2057	1/1:2,4:6:18.06:438,18,0	0/1:6,6:12:95.78:613,0,96	1/1:1,13:14:42.13:1135,42,0	1/1:4,4:8:24.06:563,24,0
chr10	65463373	.	GCC	G	2020.02	PASS	AB=0.667;AC=33;AF=0.589;AN=56;BaseQRankSum=15.518;DP=353;FS=7.450;HRun=2;HaplotypeScore=174.8537;InbreedingCoeff=0.8962;MQ=98.47;MQ0=0;MQRankSum=-14.021;QD=12.24;ReadPosRankSum=7.260;VQSLOD=0.4348;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:2,15:17:40.67:211,41,0	1/1:3,2:5:11.44:62,11,0	0/0:24,0:23:66.23:0,66,1287	0/0:24,0:24:62.03:0,62,1093	0/0:19,0:19:51.17:0,51,1021	1/1:0,11:11:31.82:176,32,0	1/1:0,7:7:20.24:110,20,0	0/0:15,0:15:39.38:0,39,805	0/0:19,0:19:57.20:0,57,1158	0/0:12,0:12:33.11:0,33,668	0/0:8,0:8:24.08:0,24,486	1/1:0,8:8:23.05:122,23,0	0/0:11,0:11:33.11:0,33,670	1/1:0,16:16:45.14:228,45,0	1/1:2,9:11:28.11:144,28,0	1/1:1,19:20:46.95:298,47,0	1/1:2,9:11:22.49:121,22,0	0/0:16,0:16:48.16:0,48,955	1/1:2,4:6:13.74:93,14,0	1/1:1,3:4:10.02:53,10,0	1/1:0,7:7:17.55:77,18,0	1/1:0,5:5:11.18:54,11,0	0/0:7,0:7:18.06:0,18,366	0/0:33,0:33:99:0,99,2011	1/1:1,4:5:11.38:63,11,0	0/1:6,6:12:95.68:111,0,96	1/1:0,13:13:37.81:218,38,0	1/1:3,4:7:17.55:104,18,0
chr10	65463376	.	AGCGGGTGGCG	A	5146.51	PASS	AB=0.893;AC=32;AF=0.571;AN=56;BaseQRankSum=15.522;DP=359;FS=5.757;HRun=0;HaplotypeScore=217.8263;InbreedingCoeff=0.8486;MQ=95.88;MQ0=0;MQRankSum=-13.845;QD=32.57;ReadPosRankSum=8.306;VQSLOD=3.4390;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:17:42.49:456,42,0	1/1:3,0:3:9.01:99,9,0	0/0:28,0:27:78.21:0,78,3005	0/0:22,0:22:63:0,63,2466	0/0:19,0:19:51.14:0,51,2302	1/1:11,0:11:33.10:391,33,0	1/1:7,0:7:21.06:235,21,0	0/0:18,0:22:63.60:0,64,2085	0/0:19,0:19:57.13:0,57,2767	0/0:12,0:12:36.10:0,36,1459	0/0:10,0:10:30.09:0,30,1304	1/1:8,0:8:24.07:275,24,0	0/0:13,0:13:39.13:0,39,1985	1/1:16,0:16:48.09:497,48,0	1/1:9,0:9:27.07:297,27,0	1/1:20,0:20:33.42:653,33,0	1/1:10,0:10:21.95:259,22,0	0/0:17,0:17:51.13:0,51,2424	1/1:4,3:7:21.03:327,21,0	0/1:4,0:4:3.86:95,0,4	1/1:7,0:7:12.04:168,12,0	1/1:5,0:5:14.39:132,14,0	0/0:7,0:7:18.05:0,18,834	0/0:32,0:32:96.30:0,96,4567	1/1:4,0:4:12.03:138,12,0	0/1:8,3:11:99:445,0,291	1/1:13,0:13:39.11:499,39,0	1/1:6,0:6:12.04:180,12,0
chr10	65463382	.	T	TTA	7728.29	PASS	AB=0.647;AC=33;AF=0.589;AN=56;BaseQRankSum=15.786;DP=366;FS=4.950;HRun=0;HaplotypeScore=158.5824;InbreedingCoeff=0.9022;MQ=93.34;MQ0=0;MQRankSum=-13.856;QD=45.73;ReadPosRankSum=7.214;VQSLOD=5.1442;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,15:19:47.37:747,47,0	1/1:1,2:3:9.03:156,9,0	0/0:28,0:29:82.34:0,82,1222	0/0:22,0:22:60.19:0,60,925	0/0:16,0:16:45.15:0,45,734	1/1:0,11:11:33.11:574,33,0	1/1:0,7:7:21.07:367,21,0	0/0:22,0:22:60.02:0,60,861	0/0:20,0:20:57.19:0,57,929	0/0:11,0:11:30.10:0,30,489	0/0:10,0:10:27.09:0,27,440	1/1:1,8:9:27.08:439,27,0	0/0:13,0:13:39.13:0,39,636	1/1:0,16:18:51.17:885,51,0	1/1:0,9:11:30.10:526,30,0	1/1:0,20:21:63.22:1100,63,0	1/1:0,9:11:26.30:414,26,0	0/0:17,0:17:51.10:0,51,776	1/1:3,4:7:15.05:252,15,0	1/1:1,4:5:15.04:228,15,0	1/1:0,7:9:18.06:284,18,0	1/1:0,5:5:15.05:242,15,0	0/0:7,0:7:21.07:0,21,342	0/0:30,0:30:90.29:0,90,1442	1/1:0,4:4:12.04:209,12,0	0/1:5,6:11:67.84:364,0,68	1/1:0,13:13:39.13:674,39,0	1/1:0,4:5:15.05:268,15,0
chr10	65463794	.	A	AAGACTTAGAAG	6009.85	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=1.107;DP=635;FS=0.000;HRun=0;HaplotypeScore=196.5790;InbreedingCoeff=0.9978;MQ=80.75;MQ0=0;MQRankSum=-9.135;QD=125.21;ReadPosRankSum=-4.968;VQSLOD=3.6244;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:96.25:0,96,2999	0/0:18,0:18:51.18:0,51,1806	0/0:25,0:24:63.21:0,63,1961	0/0:20,0:21:57.19:0,57,1763	0/0:20,0:20:60.20:0,60,1859	0/0:26,0:26:75.24:0,75,2554	0/0:16,0:16:48.16:0,48,1567	1/1:31,13:47:99:6010,132,0	0/0:26,0:26:78.27:0,78,2685	0/0:25,0:25:69.23:0,69,2220	0/0:22,0:22:63.22:0,63,2089	0/0:21,0:21:60.21:0,60,2074	0/0:14,0:14:39.13:0,39,1341	0/0:14,0:14:42.14:0,42,1483	0/0:33,0:33:87.29:0,87,2843	0/0:21,0:21:57.19:0,57,1791	0/0:31,0:31:90.31:0,90,3146	0/0:19,0:19:48.64:0,49,1652	0/0:29,0:29:81.28:0,81,2756	0/0:20,0:20:57.19:0,57,1940	0/0:24,0:24:52.26:0,52,2170	0/0:15,0:15:45.15:0,45,1488	0/0:15,0:15:45.15:0,45,1606	0/0:19,0:19:51.18:0,51,1757	0/0:9,0:9:24.08:0,24,856	0/0:17,0:17:51.15:0,51,1581	0/0:30,0:30:87.28:0,87,2939	0/0:23,0:22:60.21:0,60,2107
chr10	65464529	.	C	CT	547.80	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=-3.095;DP=462;FS=1.987;HRun=6;HaplotypeScore=44.4158;InbreedingCoeff=0.6211;MQ=62.60;MQ0=12;MQRankSum=-1.539;QD=16.60;ReadPosRankSum=-0.421;VQSLOD=2.8809;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:40:99:0,107,1100	0/0:9,0:9:18.04:0,18,184	0/1:8,0:7:6.09:6,0,70	0/0:13,0:4:5.73:0,6,34	0/0:23,0:22:57.10:0,57,568	0/0:15,0:15:39.09:0,39,398	0/0:17,0:17:48.09:0,48,482	0/0:30,0:28:54.10:0,54,544	0/0:12,0:12:36.08:0,36,367	0/0:14,0:14:36.08:0,36,367	0/0:17,0:17:41.74:0,42,421	0/0:19,0:18:48.09:0,48,483	0/0:7,0:7:18.04:0,18,184	0/0:7,0:7:18.04:0,18,183	0/0:18,0:16:45.10:0,45,459	0/0:13,0:12:24.05:0,24,245	0/0:26,0:26:60.13:0,60,612	1/1:3,22:24:51.16:641,51,0	0/0:24,0:23:54.11:0,54,546	0/0:20,0:20:54.09:0,54,537	0/0:6,0:6:15.01:0,15,145	0/0:8,0:8:18.04:0,18,184	0/0:19,0:19:51.10:0,51,514	0/0:19,0:19:45.10:0,45,459	0/0:10,0:10:27.01:0,27,254	0/0:12,0:12:30.06:0,30,301	0/0:14,0:14:36.07:0,36,361	0/0:15,0:15:30.06:0,30,306
chr10	65464618	.	TA	T	361.35	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.047;DP=460;FS=2.479;HRun=12;HaplotypeScore=50.2694;InbreedingCoeff=0.6941;MQ=73.86;MQ0=7;MQRankSum=0.936;QD=15.06;ReadPosRankSum=-1.408;VQSLOD=3.8475;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:39,1:40:84.76:0,85,995	0/0:5,0:5:15.03:0,15,152	0/0:25,0:13:32.03:0,32,264	0/0:15,0:10:9.68:0,10,91	0/0:23,1:24:39.70:0,40,556	0/0:16,1:17:21.86:0,22,403	0/0:17,0:17:36.03:0,36,355	1/1:3,21:24:59.61:456,60,0	0/0:11,0:11:24.04:0,24,238	0/0:15,0:15:39.05:0,39,379	0/0:18,0:18:33.06:0,33,330	0/0:12,0:12:21.01:0,21,200	0/0:10,1:11:0.81:0,1,190	0/0:9,0:9:21.04:0,21,213	0/0:18,0:17:39.06:0,39,389	0/0:8,0:8:23.84:0,24,208	0/0:21,0:22:59.91:0,60,576	0/0:23,0:22:57.06:0,57,561	0/0:8,0:10:29.82:0,30,270	0/0:19,4:22:7.40:0,7,408	0/0:15,1:16:15.67:0,16,303	0/0:13,0:13:27.04:0,27,266	0/0:12,0:12:32.27:0,32,305	0/0:14,1:15:18.83:0,19,365	0/0:14,0:15:38.90:0,39,373	0/0:19,0:19:51.06:0,51,496	0/0:12,0:14:29.89:0,30,288	0/0:7,0:7:21.02:0,21,206
chr10	65464925	.	TG	T	13087.63	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=17.278;DP=657;FS=10.884;HRun=4;HaplotypeScore=100.5952;InbreedingCoeff=0.9987;MQ=89.06;MQ0=0;MQRankSum=-5.056;QD=32.16;ReadPosRankSum=1.052;VQSLOD=4.2296;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,38:38:99:1188,99,0	1/1:0,6:6:18.06:216,18,0	0/0:27,0:27:75.22:0,75,985	0/0:23,0:23:60.19:0,60,806	0/0:25,0:25:75.24:0,75,1031	1/1:2,25:27:69.21:828,69,0	1/1:2,27:29:78.24:936,78,0	0/0:32,0:32:90.28:0,90,1216	0/0:27,0:27:78.26:0,78,1092	0/0:17,0:17:51.17:0,51,712	0/0:17,0:17:51.17:0,51,714	1/1:0,21:21:63.19:756,63,0	0/0:16,0:16:45.15:0,45,629	1/1:0,16:16:45.14:540,45,0	1/1:2,22:24:60.18:720,60,0	1/1:1,26:27:30.20:786,30,0	1/1:1,32:33:93.28:1112,93,0	0/0:19,0:19:57.19:0,57,798	1/1:0,25:25:72.21:855,72,0	1/1:0,20:20:57.17:681,57,0	1/1:1,39:40:99:1332,111,0	1/1:0,18:18:45.14:536,45,0	0/0:13,0:13:36.12:0,36,504	0/0:34,0:34:99:0,102,1428	1/1:2,17:19:45.14:540,45,0	1/1:1,29:30:64.45:986,64,0	1/1:3,18:21:54.17:648,54,0	1/1:1,12:13:36.11:428,36,0
chr10	65467214	.	GATATATATATATATATATATATAT	G	2294.34	PASS	AC=20;AF=0.714;AN=28;BaseQRankSum=3.577;DP=201;FS=1.527;HRun=0;HaplotypeScore=115.0941;InbreedingCoeff=0.3924;MQ=67.30;MQ0=3;MQRankSum=-2.273;QD=28.33;ReadPosRankSum=0.771;VQSLOD=2.4396;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:14,2:16:3.01:188,3,0	1/1:0,1:1:3.01:188,3,0	./.	0/0:13,0:5:0.89:0,1,2	./.	1/1:10,5:16:11.26:730,11,0	./.	0/0:16,0:16:1.25:0,1,3	./.	./.	./.	./.	0/0:3,0:3:3:0,3,25	./.	./.	1/1:1,0:2:3.01:168,3,0	1/1:5,7:13:5.98:208,6,0	0/0:19,0:20:33.11:0,33,2666	./.	1/1:0,1:2:3.01:188,3,0	1/1:4,0:4:3:27,3,0	./.	./.	./.	1/1:7,0:8:3.01:168,3,0	./.	1/1:11,1:13:9.03:523,9,0	1/1:5,0:5:2.04:6,2,0
chr10	65467346	.	GA	G	1990.97	PASS	AB=0.765;AC=33;AF=0.589;AN=56;BaseQRankSum=0.806;DP=303;FS=6.493;HRun=14;HaplotypeScore=35.4870;InbreedingCoeff=0.5279;MQ=64.58;MQ0=6;MQRankSum=2.619;QD=9.30;ReadPosRankSum=4.894;VQSLOD=2.0132;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,17:20:44.63:308,45,0	1/1:3,1:4:2.95:21,3,0	0/0:15,0:6:8.69:0,9,50	0/1:20,0:9:6.94:7,0,40	0/0:4,1:4:2.99:0,3,25	1/1:3,11:14:4.90:178,5,0	1/1:2,9:11:23.79:164,24,0	0/0:10,0:22:36.27:0,36,198	0/1:8,0:8:1.25:1,0,107	0/0:12,0:11:15.01:0,15,137	0/0:4,0:3:6.01:0,6,56	0/1:4,4:9:7.99:89,0,8	0/0:4,0:4:12.01:0,12,111	1/1:2,8:10:20.81:144,21,0	1/1:4,7:11:17.82:123,18,0	0/1:3,12:15:22.95:152,0,23	1/1:5,8:17:2.26:147,2,0	0/0:13,1:15:12.10:0,12,244	0/1:6,9:15:1.18:136,0,1	1/1:3,4:8:8.33:61,8,0	1/1:1,5:7:16.90:109,17,0	1/1:1,2:3:5.94:41,6,0	0/0:4,0:3:8.96:0,9,71	0/0:7,0:7:11.94:0,12,111	1/1:0,4:5:10.92:67,11,0	1/1:3,10:13:29.74:206,30,0	1/1:7,8:15:6.58:144,7,0	1/1:5,4:8:11.64:82,12,0
chr10	65467729	.	GGGGGGA	G	683.35	PASS	AC=2;AF=0.037;AN=54;BaseQRankSum=4.585;DP=285;FS=34.858;HRun=0;HaplotypeScore=61.2000;InbreedingCoeff=0.6620;MQ=85.04;MQ0=4;MQRankSum=-0.938;QD=28.47;ReadPosRankSum=0.521;VQSLOD=1.5803;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:18.04:0,18,402	./.	0/0:33,0:13:32.70:0,33,453	0/0:23,0:17:31.63:0,32,671	0/0:8,0:7:11.98:0,12,169	0/0:11,0:11:20.87:0,21,485	0/0:10,0:10:20.98:0,21,484	1/1:7,17:24:59.79:778,60,0	0/0:8,0:8:17.89:0,18,334	0/0:10,0:10:15.03:0,15,190	0/0:10,0:10:23.97:0,24,323	0/0:12,0:12:17.41:0,17,284	0/0:8,0:8:18.02:0,18,313	0/0:6,0:6:18.04:0,18,337	0/0:11,0:11:27.01:0,27,674	0/0:8,0:8:20.09:0,20,473	0/0:13,0:13:30.07:0,30,714	0/0:8,0:8:24.08:0,24,608	0/0:7,0:7:19.56:0,20,298	0/0:6,0:6:11.93:0,12,128	0/0:3,0:3:5.99:0,6,50	0/0:4,0:4:6.01:0,6,122	0/0:5,0:4:9.01:0,9,171	0/0:8,0:8:18.01:0,18,414	0/0:6,0:6:9.03:0,9,241	0/0:12,0:12:21.04:0,21,312	0/0:14,0:13:20.64:0,21,455	0/0:8,0:8:23.98:0,24,395
chr10	65469294	.	CGAGAGAGA	C	4437.47	PASS	AB=0.793;AC=32;AF=0.593;AN=54;BaseQRankSum=4.531;DP=489;FS=9.349;HRun=0;HaplotypeScore=134.8146;InbreedingCoeff=0.6525;MQ=57.36;MQ0=4;MQRankSum=-6.076;QD=15.90;ReadPosRankSum=-1.035;VQSLOD=3.2458;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:19,1:22:11.99:128,12,0	1/1:2,2:4:6.02:151,6,0	0/0:22,0:12:3.01:0,3,32	0/0:32,0:14:2.80:0,3,34	0/0:7,0:14:18.04:0,18,316	1/1:11,8:20:9.03:226,9,0	./.	0/0:27,0:25:8.24:0,8,81	0/0:9,0:17:27.09:0,27,805	0/0:19,0:22:36.12:0,36,1162	0/0:13,0:21:8.43:0,8,449	1/1:10,4:14:9.03:226,9,0	0/0:8,0:11:18.06:0,18,488	1/1:5,5:12:11.87:281,12,0	1/1:9,4:15:18.06:413,18,0	1/1:10,7:18:15.05:357,15,0	0/1:16,3:19:59:141,0,59	1/1:11,0:15:5.07:110,5,0	1/1:17,7:24:13.53:362,14,0	1/1:12,7:19:12.04:301,12,0	1/1:14,0:14:3.01:68,3,0	1/1:9,9:18:9.03:226,9,0	0/0:13,0:15:27.09:0,27,998	0/0:16,0:17:36.12:0,36,1335	1/1:3,6:9:9.03:226,9,0	0/1:16,10:26:88.56:470,0,89	1/1:7,9:16:27.09:658,27,0	1/1:11,1:14:8.90:95,9,0
chr10	65471745	.	C	CGCGGTCT	4226.14	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-7.185;DP=734;FS=4.985;HRun=0;HaplotypeScore=163.5983;InbreedingCoeff=0.9979;MQ=86.02;MQ0=1;MQRankSum=-6.904;QD=100.62;ReadPosRankSum=-4.088;VQSLOD=5.0799;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,163,4262	0/0:14,0:14:42.14:0,42,1174	0/0:25,0:25:69.16:0,69,1565	0/0:24,0:24:59.02:0,59,1671	0/0:21,0:21:63.22:0,63,1666	0/0:22,0:22:63.22:0,63,1670	0/0:23,0:23:66.23:0,66,1766	1/1:3,22:32:93.29:3348,93,0	0/0:30,0:30:87.30:0,87,2433	0/0:34,0:34:99:0,99,2639	0/0:18,0:18:51.17:0,51,1415	0/0:22,0:22:66.21:0,66,1751	0/0:25,0:25:72.25:0,72,1944	0/0:26,0:26:78.27:0,78,2113	0/0:38,0:38:99:0,114,3059	0/0:18,0:18:54.19:0,54,1510	0/0:45,0:45:99:0,135,3591	1/1:2,5:9:21.07:878,21,0	0/0:19,0:18:57.17:0,57,1432	0/0:24,0:24:72.25:0,72,1907	0/0:50,0:50:99:0,147,3859	0/0:21,0:21:63.22:0,63,1733	0/0:19,0:19:54.16:0,54,1377	0/0:22,0:22:66.23:0,66,1845	0/0:24,0:24:72.23:0,72,1910	0/0:21,0:21:57.18:0,57,1520	0/0:30,0:30:90.29:0,90,2360	0/0:22,0:22:66.17:0,66,1709
chr10	65472084	.	CTAGCTTGTTTGTTTGTTTGTTTGT	C	953.24	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.640;DP=389;FS=18.296;HRun=0;HaplotypeScore=245.1740;InbreedingCoeff=0.8885;MQ=75.73;MQ0=1;MQRankSum=-1.963;QD=26.48;ReadPosRankSum=-3.231;VQSLOD=0.6386;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:69.24:0,69,3875	0/0:6,0:6:18.06:0,18,1427	0/0:21,0:20:57.08:0,57,2498	0/0:9,0:8:21.03:0,21,851	0/0:14,0:14:42.14:0,42,2519	0/0:18,0:18:48.16:0,48,3060	0/0:14,0:14:42.14:0,42,2106	1/1:4,18:22:55.78:942,56,0	0/0:10,0:10:30.09:0,30,1255	0/0:15,0:15:45.15:0,45,3176	0/0:5,0:5:15.04:0,15,667	0/0:8,0:8:21.07:0,21,1605	0/0:7,0:7:21.07:0,21,1511	0/0:8,0:8:24.05:0,24,1237	0/0:9,0:9:24.08:0,24,1558	0/0:3,0:3:9.02:0,9,429	0/0:29,0:29:75.26:0,75,4792	1/1:0,0:14:6.02:123,6,0	0/0:31,0:31:90.31:0,90,5517	0/0:8,0:8:24.08:0,24,1624	0/0:22,0:22:66.20:0,66,3226	0/0:9,0:9:27.09:0,27,1167	0/0:6,0:6:18.04:0,18,1012	0/0:8,0:8:24.08:0,24,1462	0/0:16,0:16:48.16:0,48,3660	0/0:20,0:20:60.20:0,60,4204	0/0:11,0:11:30.10:0,30,1626	0/0:23,0:23:63.22:0,63,5145
chr10	65472111	.	GTTTA	G	2223.87	PASS	AB=1.000;AC=33;AF=0.688;AN=48;BaseQRankSum=1.330;DP=333;FS=2.898;HRun=0;HaplotypeScore=76.0661;InbreedingCoeff=0.5394;MQ=56.35;MQ0=5;MQRankSum=5.235;QD=9.80;ReadPosRankSum=3.743;VQSLOD=2.4478;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:13,5:18:27.02:334,27,0	./.	./.	./.	0/0:9,0:9:3.01:0,3,51	1/1:4,9:13:15.05:238,15,0	1/1:6,1:7:2.92:17,3,0	0/0:42,0:40:56.31:0,56,383	1/1:5,0:5:3:25,3,0	0/0:10,0:10:6.02:0,6,114	0/0:3,0:3:2.88:0,3,15	1/1:9,0:9:11.90:92,12,0	0/0:8,0:8:9.02:0,9,147	./.	1/1:3,2:5:3.01:48,3,0	1/1:4,0:4:6:72,6,0	1/1:9,20:29:21.07:333,21,0	0/1:16,0:16:6.30:6,0,33	1/1:27,3:28:24:267,24,0	1/1:5,1:6:3.01:38,3,0	1/1:8,2:10:6.02:93,6,0	1/1:2,0:5:5.85:34,6,0	0/0:5,0:5:2.99:0,3,24	0/0:8,0:8:6.02:0,6,128	1/1:13,6:19:36:451,36,0	1/1:13,2:15:6.02:95,6,0	1/1:6,4:10:3.01:48,3,0	1/1:17,9:26:12.04:190,12,0
chr10	65475265	.	C	CCT	188.76	PASS	AB=0.973;AC=17;AF=0.315;AN=54;BaseQRankSum=3.920;DP=238;FS=7.214;HRun=0;HaplotypeScore=74.5201;InbreedingCoeff=0.1028;MQ=40.10;MQ0=37;MQRankSum=-1.286;QD=1.66;ReadPosRankSum=-2.521;VQSLOD=0.0603;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:14:12.09:0,12,102	1/1:1,0:1:2.92:17,3,0	0/0:4,0:2:6.02:0,6,88	0/0:21,0:6:7.72:0,8,75	./.	0/1:8,1:9:50.34:50,0,68	0/1:8,0:7:7.05:7,0,29	0/1:20,0:16:36.54:37,0,269	0/0:8,0:7:7.57:0,8,74	0/0:12,0:11:32.52:0,33,375	0/0:3,0:2:3.01:0,3,46	0/0:9,0:6:7.54:0,8,71	0/0:7,0:7:7.32:0,7,68	0/1:7,0:5:12.68:13,0,30	0/0:8,0:8:1.29:0,1,38	0/1:9,0:5:3.29:47,0,3	0/1:9,0:7:1.19:1,0,60	0/0:5,0:3:8.99:0,9,99	0/1:4,0:3:0.52:42,0,1	1/1:7,0:6:2.77:24,3,0	0/1:13,0:10:0:0,0,0	0/1:10,1:10:0.55:51,0,1	1/1:5,0:4:0.12:0,0,0	0/0:13,1:12:1.24:0,1,157	0/1:7,1:5:3.57:28,0,4	0/0:6,0:6:14.98:0,15,159	0/1:3,0:2:0.01:0,0,0	0/0:2,0:1:3.01:0,3,48
chr10	65475279	.	C	CCT	445.14	PASS	AB=0.955;AC=27;AF=0.500;AN=54;BaseQRankSum=2.033;DP=176;FS=3.025;HRun=0;HaplotypeScore=59.8050;InbreedingCoeff=0.0991;MQ=46.07;MQ0=26;MQRankSum=-0.108;QD=3.94;ReadPosRankSum=2.229;VQSLOD=1.5094;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:9:5.33:0,5,29	1/1:0,1:1:3.01:54,3,0	0/0:5,0:3:6.01:0,6,76	0/0:13,0:6:3.01:0,3,136	0/1:5,0:4:0:0,0,0	0/1:7,1:8:1.37:46,0,1	1/1:5,0:5:3.90:44,4,0	0/1:14,0:10:26.18:26,0,49	0/0:7,0:6:5.47:0,5,37	0/1:8,0:7:17.57:19,0,18	./.	0/1:6,1:5:7.11:54,0,7	0/0:6,0:6:6:0,6,21	1/1:6,0:4:3.45:22,3,0	1/1:3,1:4:3.01:37,3,0	1/1:1,3:3:5.98:80,6,0	0/1:5,0:4:22.52:41,0,23	1/1:3,0:1:3.01:45,3,0	0/1:4,1:3:6.94:59,0,7	1/1:4,0:3:2.85:33,3,0	0/0:11,0:8:5.41:0,5,20	0/1:9,0:9:0.40:9,0,0	1/1:4,0:4:0.01:0,0,0	0/1:11,0:9:7.90:8,0,25	1/1:7,0:4:0.52:3,1,0	0/0:4,0:4:2.77:0,3,75	0/0:2,0:1:0:0,0,0	0/0:1,0:1:2.50:0,2,9
chr10	65475526	.	TTCCC	T	812.48	PASS	AB=0.875;AC=26;AF=0.591;AN=44;BaseQRankSum=-0.460;DP=84;FS=11.344;HRun=0;HaplotypeScore=23.0335;InbreedingCoeff=0.4101;MQ=55.19;MQ0=3;MQRankSum=1.379;QD=19.34;ReadPosRankSum=-0.955;VQSLOD=1.2293;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,3:11:16.04:288,16,0	./.	0/0:9,0:2:5.23:0,5,81	0/0:8,0:1:5.91:0,6,90	0/0:4,0:4:9.03:0,9,220	1/1:0,1:1:3.01:50,3,0	1/1:2,3:5:9.03:138,9,0	0/0:7,0:6:6:0,6,75	0/0:2,0:2:6.02:0,6,137	0/1:2,0:2:0.59:1,0,48	./.	1/1:0,2:2:6.02:97,6,0	./.	1/1:0,2:2:3.01:50,3,0	./.	1/1:0,1:1:3.01:50,3,0	1/1:1,1:2:3.01:50,3,0	1/1:1,0:1:2.68:11,3,0	1/1:1,1:2:3.01:50,3,0	./.	1/1:3,2:5:6.02:85,6,0	1/1:3,1:3:2.71:49,3,0	0/0:2,0:2:0:0,0,0	0/0:7,0:8:11.07:0,11,284	1/1:1,0:1:0.47:1,0,0	0/1:2,1:3:33.36:33,0,45	0/0:1,0:1:3.01:0,3,37	./.
chr10	65475775	.	T	TC	1866.41	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-9.271;DP=578;FS=1.206;HRun=0;HaplotypeScore=56.9185;InbreedingCoeff=0.9880;MQ=83.01;MQ0=0;MQRankSum=0.453;QD=43.40;ReadPosRankSum=-1.291;VQSLOD=3.6014;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,123,1700	0/0:11,0:11:24.07:0,24,318	0/0:21,0:21:37.12:0,37,538	0/0:17,0:17:21:0,21,543	0/0:18,0:18:51.12:0,51,689	0/0:13,0:13:39.13:0,39,541	0/0:34,0:34:99:0,102,1389	1/1:0,24:24:72.23:1125,72,0	0/0:22,0:22:63.20:0,63,864	0/0:16,0:16:48.12:0,48,649	0/0:15,0:15:45.11:0,45,607	0/0:28,0:28:84.25:0,84,1137	0/0:23,0:23:66.21:0,66,906	0/0:20,0:20:60.20:0,60,833	0/0:29,0:29:87.28:0,87,1199	0/0:25,0:25:75.23:0,75,1019	0/0:28,0:28:81.26:0,81,1107	1/1:0,19:19:54.18:863,54,0	0/0:21,0:21:57.18:0,57,782	0/0:6,0:6:15.05:0,15,209	0/0:42,0:42:99:0,120,1643	0/0:10,0:10:30.10:0,30,419	0/0:10,0:10:30.09:0,30,401	0/0:24,0:24:69.23:0,69,964	0/0:13,0:13:39.11:0,39,526	0/0:15,0:15:42.14:0,42,587	0/0:22,0:22:66.22:0,66,921	0/0:11,0:11:33.11:0,33,455
chr10	65476088	.	GTT	G	6076.69	PASS	AB=0.626;AC=36;AF=0.643;AN=56;BaseQRankSum=8.295;DP=510;FS=1.392;HRun=13;HaplotypeScore=95.2097;InbreedingCoeff=0.7942;MQ=66.69;MQ0=2;MQRankSum=-3.681;QD=18.03;ReadPosRankSum=4.475;VQSLOD=4.3439;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,33:37:72.05:697,72,0	1/1:3,7:10:12:116,12,0	0/0:13,0:6:3.01:0,3,42	0/0:18,0:12:13.17:0,13,92	0/0:23,0:25:65.61:0,66,839	1/1:1,16:17:39.02:378,39,0	1/1:6,13:19:30.01:291,30,0	0/0:8,1:20:12.31:0,12,128	0/1:3,2:14:26.17:26,0,123	0/0:5,0:28:29.19:0,29,196	0/0:4,0:19:38.86:0,39,209	1/1:2,14:16:36.05:349,36,0	0/0:20,0:22:47.98:0,48,658	1/1:4,13:17:36.05:348,36,0	1/1:2,19:22:44.60:417,45,0	1/1:2,19:21:41.77:406,42,0	1/1:7,19:26:41.98:407,42,0	0/1:5,4:9:24.33:101,0,24	1/1:11,8:19:31.34:274,31,0	1/1:4,9:13:27.03:261,27,0	1/1:3,14:17:39.04:378,39,0	1/1:8,5:13:9.44:88,9,0	0/0:10,0:10:18.06:0,18,260	0/0:14,0:14:39.09:0,39,540	1/1:3,6:9:18.01:174,18,0	1/1:2,12:14:36.05:349,36,0	1/1:3,27:29:78.12:756,78,0	1/1:4,10:13:27.04:262,27,0
chr10	65476667	.	ACC	A	495.68	PASS	AB=0.957;AC=7;AF=0.125;AN=56;BaseQRankSum=2.217;DP=387;FS=0.000;HRun=12;HaplotypeScore=56.1962;InbreedingCoeff=0.3497;MQ=49.57;MQ0=31;MQRankSum=-1.953;QD=6.88;ReadPosRankSum=1.268;VQSLOD=-0.7181;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:0.55:0,1,18	0/0:2,0:2:6:0,6,53	0/0:57,1:8:17.84:0,18,220	0/0:54,0:11:17.37:0,17,131	0/1:15,0:16:20.48:20,0,94	0/0:9,0:9:5.82:0,6,35	0/0:12,0:12:23.48:0,23,219	1/1:16,6:22:38.92:348,39,0	1/1:8,3:12:26.40:187,26,0	0/0:7,0:7:10.48:0,10,54	0/0:16,0:14:17.53:0,18,142	0/0:4,0:4:9.02:0,9,95	0/0:10,0:10:6.96:0,7,178	0/0:7,0:7:10.93:0,11,126	0/0:6,0:6:14.97:0,15,148	0/0:11,0:11:14.91:0,15,129	0/0:28,1:29:38.15:0,38,365	0/1:12,1:11:3.39:65,0,3	0/1:9,0:7:13.21:13,0,73	0/0:9,0:9:14.67:0,15,137	0/0:5,0:3:3.01:0,3,33	0/0:5,0:5:9.02:0,9,95	0/0:4,0:4:6.01:0,6,60	0/0:16,0:16:12.04:0,12,161	0/0:10,0:9:7.57:0,8,75	0/0:8,0:7:8.66:0,9,53	0/0:12,0:10:11.93:0,12,107	0/0:4,0:3:5.97:0,6,57
chr10	65476677	.	CCCAA	C	545.74	PASS	AB=1.000;AC=4;AF=0.071;AN=56;BaseQRankSum=-0.927;DP=430;FS=5.819;HRun=0;HaplotypeScore=66.9980;InbreedingCoeff=0.3079;MQ=52.80;MQ0=30;MQRankSum=-1.817;QD=11.86;ReadPosRankSum=0.229;VQSLOD=1.8079;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:2.37:0,2,50	0/0:3,0:3:6.01:0,6,81	0/0:77,0:14:32.86:0,33,365	0/0:68,0:16:24.52:0,25,281	0/0:16,0:16:32.95:0,33,393	0/0:9,0:9:9.03:0,9,117	0/0:13,0:13:29.66:0,30,368	1/1:13,7:21:44.38:581,44,0	0/1:12,0:13:33.25:69,0,33	0/0:6,0:6:13.65:0,14,176	0/0:16,0:15:28.55:0,29,443	0/0:4,0:4:12:0,12,157	0/0:12,0:12:13.49:0,13,402	0/0:8,0:8:15.04:0,15,182	0/0:8,0:8:23.89:0,24,266	0/0:10,0:10:14.95:0,15,186	0/0:31,0:32:50.21:0,50,687	0/1:12,0:9:5.73:6,0,48	0/0:8,0:8:16.25:0,16,175	0/0:8,0:8:21:0,21,286	0/0:8,0:6:14.89:0,15,133	0/0:4,0:4:9.03:0,9,149	0/0:6,0:6:8.91:0,9,94	0/0:14,0:14:15.52:0,16,303	0/0:11,0:10:12.03:0,12,159	0/0:10,0:9:15.02:0,15,151	0/0:11,0:9:12.03:0,12,196	0/0:5,0:4:5.97:0,6,84
chr10	65477540	.	C	CT	195.88	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-2.545;DP=672;FS=21.263;HRun=2;HaplotypeScore=66.3223;InbreedingCoeff=0.9338;MQ=67.37;MQ0=1;MQRankSum=-2.418;QD=21.76;ReadPosRankSum=-3.915;VQSLOD=1.5471;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,153,1912	0/0:15,0:15:45.10:0,45,565	0/0:32,0:30:81.18:0,81,976	0/0:29,0:28:58.94:0,59,738	0/0:19,0:19:57.19:0,57,739	0/0:23,0:23:66.21:0,66,856	0/0:32,0:32:96.31:0,96,1246	1/1:2,0:2:6.02:88,6,0	0/0:26,0:26:78.25:0,78,1011	0/0:20,0:20:51.16:0,51,652	0/0:11,0:11:33.08:0,33,401	0/0:26,0:26:75.22:0,75,944	0/0:31,0:31:90.28:0,90,1154	0/0:23,0:23:63.17:0,63,789	0/0:25,0:25:75.24:0,75,961	0/0:18,0:18:54.17:0,54,688	0/0:30,0:30:84.27:0,84,1090	1/1:0,7:7:15.05:215,15,0	0/0:27,0:27:81.20:0,81,1008	0/0:16,0:16:45.15:0,45,583	0/0:58,0:57:99:0,169,2162	0/0:15,0:15:45.13:0,45,570	0/0:14,0:14:39.13:0,39,501	0/0:34,0:34:99:0,99,1270	0/0:23,0:23:69.20:0,69,879	0/0:32,0:32:96.30:0,96,1224	0/0:10,0:9:27.09:0,27,350	0/0:21,0:21:63.20:0,63,817
chr10	65479325	.	AG	A	4509.50	PASS	AB=0.943;AC=48;AF=0.857;AN=56;BaseQRankSum=-1.981;DP=436;FS=15.251;HRun=1;HaplotypeScore=58.4535;InbreedingCoeff=-0.0550;MQ=49.01;MQ0=41;MQRankSum=-0.434;QD=10.34;ReadPosRankSum=-0.780;VQSLOD=1.0386;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:14:28.80:227,29,0	1/1:9,0:9:25.86:180,26,0	0/1:40,2:5:6.70:7,0,27	0/1:55,0:11:6.33:6,0,21	0/1:20,0:17:26.16:122,0,26	1/1:9,0:9:23.76:180,24,0	1/1:11,0:11:25.63:153,26,0	1/1:20,0:19:35.52:247,36,0	1/1:5,0:5:11.19:60,11,0	0/1:21,0:20:58.88:59,0,144	0/1:12,0:12:34.47:34,0,86	1/1:16,0:15:38.89:260,39,0	0/1:10,0:9:8.37:63,0,8	1/1:11,0:11:24.92:172,25,0	1/1:11,0:11:31.37:205,31,0	1/1:15,0:15:35.47:238,35,0	1/1:27,0:26:66.18:449,66,0	1/1:10,1:10:29.20:209,29,0	1/1:4,4:7:17.82:123,18,0	1/1:16,0:16:45.68:277,46,0	1/1:8,0:8:19.16:115,19,0	1/1:10,0:10:23.60:173,24,0	0/1:20,0:20:58.33:58,0,80	0/1:3,7:10:4.76:11,0,5	1/1:9,0:9:26.04:185,26,0	1/1:20,0:20:56.14:437,56,0	1/1:11,1:12:26.96:197,27,0	1/1:3,1:3:8.89:60,9,0
chr10	65480779	.	GA	G	4988.25	PASS	AB=0.667;AC=37;AF=0.661;AN=56;BaseQRankSum=3.363;DP=515;FS=8.833;HRun=10;HaplotypeScore=70.2333;InbreedingCoeff=0.8705;MQ=47.78;MQ0=12;MQRankSum=-1.530;QD=14.29;ReadPosRankSum=2.903;VQSLOD=4.5713;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,22:29:30.98:361,31,0	0/1:4,4:8:15.05:114,0,15	0/0:11,0:4:6.02:0,6,66	0/0:12,0:2:6:0,6,56	0/0:24,0:24:30.32:0,30,330	1/1:4,7:11:17.67:156,18,0	1/1:5,12:17:23.58:194,24,0	1/1:20,15:32:36.17:400,36,0	0/0:26,0:26:34.27:0,34,585	0/0:22,0:22:40.39:0,40,407	0/0:20,0:21:38.71:0,39,373	1/1:4,7:11:20.80:182,21,0	0/0:9,0:8:17.66:0,18,107	1/1:6,10:15:19.85:180,20,0	1/1:6,5:10:20.64:166,21,0	1/1:2,9:11:23.62:206,24,0	1/1:10,17:26:38.72:358,39,0	1/1:9,13:20:32.93:286,33,0	1/1:5,16:21:41.80:356,42,0	1/1:4,24:27:55.95:491,56,0	1/1:2,6:8:12.46:105,12,0	1/1:4,13:18:21.48:271,21,0	0/0:23,0:23:41.25:0,41,414	0/0:17,1:17:9.62:0,10,258	1/1:7,12:17:26.99:234,27,0	1/1:7,19:23:50.98:443,51,0	1/1:7,10:16:29.93:252,30,0	1/1:1,11:11:26.99:234,27,0
chr10	65481460	.	CA	C	9078.02	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=5.172;DP=441;FS=2.872;HRun=1;HaplotypeScore=47.5187;InbreedingCoeff=0.9894;MQ=93.42;MQ0=0;MQRankSum=-1.990;QD=35.46;ReadPosRankSum=5.197;VQSLOD=4.4830;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,20:20:39.13:543,39,0	1/1:0,3:3:9.03:126,9,0	0/0:26,0:27:65.91:0,66,1089	0/0:15,0:15:39.05:0,39,550	0/0:18,0:18:54.17:0,54,839	1/1:0,20:20:48.16:670,48,0	1/1:0,14:14:39.13:544,39,0	0/0:32,0:32:96.32:0,96,1507	0/0:15,0:15:45.15:0,45,708	0/0:20,0:20:60.20:0,60,952	0/0:10,0:10:30.09:0,30,455	1/1:0,8:8:24.08:334,24,0	0/0:16,0:16:42.13:0,42,647	1/1:0,14:14:36.12:502,36,0	1/1:0,10:10:27.09:377,27,0	1/1:0,11:11:32.94:432,33,0	1/1:3,29:32:84.28:1171,84,0	0/0:8,0:8:24.08:0,24,384	1/1:0,18:18:50.82:656,51,0	1/1:0,14:14:35.91:474,36,0	1/1:0,19:19:42.14:586,42,0	1/1:0,8:8:18.06:251,18,0	0/0:15,0:15:45.15:0,45,719	0/0:9,0:9:27.09:0,27,431	1/1:0,12:12:30.10:419,30,0	1/1:0,20:20:51.02:657,51,0	1/1:0,18:18:54.18:749,54,0	1/1:0,15:15:42.14:586,42,0
chr10	65481542	.	TTTC	T	68.84	PASS	AB=0.973;AC=16;AF=0.286;AN=56;BaseQRankSum=4.326;DP=339;FS=41.609;HRun=0;HaplotypeScore=72.9960;InbreedingCoeff=-0.0116;MQ=70.49;MQ0=19;MQRankSum=-1.454;QD=0.60;ReadPosRankSum=4.675;VQSLOD=-0.1619;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:13,1:14:2.71:3,0,90	1/1:1,0:1:1.55:4,2,0	0/0:48,0:16:5.44:0,5,171	0/0:40,1:13:16.79:0,17,165	0/0:16,0:15:29.47:0,29,303	0/1:14,1:14:26.28:26,0,45	0/1:2,0:2:3.03:3,0,11	0/0:22,0:17:28.79:0,29,242	0/1:3,0:3:1.91:2,0,40	0/0:11,0:11:23.18:0,23,246	0/0:8,0:7:18.03:0,18,139	1/1:4,0:4:8.58:39,9,0	0/0:9,0:9:14.30:0,14,140	0/1:5,1:6:15.86:49,0,16	0/1:7,0:7:7.82:8,0,45	0/1:6,0:5:10.32:13,0,10	0/1:17,1:18:33.34:33,0,71	0/0:6,0:5:11.98:0,12,112	0/0:23,0:19:31.12:0,31,304	0/1:14,0:14:3.02:3,0,108	0/1:2,0:2:0:0,0,0	0/0:5,0:5:11.75:0,12,96	0/0:6,0:5:8.89:0,9,101	0/0:3,0:3:6.43:0,6,45	0/0:19,0:19:3.83:0,4,122	0/1:11,0:11:4.99:5,0,82	0/1:12,0:12:16.51:17,0,97	0/0:6,0:6:8.46:0,8,78
chr10	65481562	.	TTC	T	2639	PASS	AB=0.992;AC=34;AF=0.630;AN=54;BaseQRankSum=1.361;DP=463;FS=28.693;HRun=0;HaplotypeScore=64.8968;InbreedingCoeff=0.3767;MQ=49.02;MQ0=37;MQRankSum=-0.520;QD=7.67;ReadPosRankSum=2.312;VQSLOD=1.3579;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,0:11:20.47:154,20,0	1/1:3,0:3:4.78:25,5,0	0/0:66,0:12:19.07:0,19,114	0/1:75,0:15:13.67:14,0,94	0/0:17,0:16:23.06:0,23,182	1/1:19,4:22:41.78:361,42,0	1/1:2,2:4:7.79:58,8,0	1/1:33,0:24:54.45:372,54,0	0/1:7,0:6:12.08:12,0,15	0/0:16,0:15:5.21:0,5,227	0/1:14,0:13:40.63:41,0,138	1/1:8,0:8:14.06:125,14,0	0/0:7,0:7:5.31:0,5,76	1/1:7,1:8:10.59:90,11,0	0/1:10,0:9:5.28:88,0,5	1/1:5,2:5:7.78:69,8,0	0/1:19,1:18:18.62:131,0,19	1/1:4,0:3:2.22:7,2,0	1/1:27,3:24:15.17:247,15,0	1/1:12,1:13:26.96:184,27,0	./.	0/0:2,0:2:1.36:0,1,2	0/0:4,0:3:5.99:0,6,48	0/0:4,0:3:5.01:0,5,71	1/1:20,3:23:24.76:314,25,0	0/1:17,0:15:1.10:113,0,1	1/1:13,4:17:37.65:313,38,0	1/1:14,1:14:4.89:91,5,0
chr10	65481568	.	T	TC	3459.76	PASS	AB=0.739;AC=26;AF=0.481;AN=54;BaseQRankSum=-1.153;DP=444;FS=2.979;HRun=0;HaplotypeScore=53.9211;InbreedingCoeff=0.3517;MQ=44.63;MQ0=42;MQRankSum=1.308;QD=15.87;ReadPosRankSum=5.011;VQSLOD=4.9115;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,5:11:7.65:170,8,0	1/1:0,4:4:6.02:81,6,0	0/0:59,0:11:15.46:0,15,177	0/0:66,0:12:17.08:0,17,153	0/0:17,0:16:32.71:0,33,288	1/1:9,14:23:27.35:381,27,0	0/1:3,2:4:6.29:72,0,6	0/0:35,0:24:66.55:0,67,448	0/1:7,0:6:8.68:9,0,35	0/0:15,0:14:31.97:0,32,446	0/0:13,0:12:34.43:0,34,290	0/1:4,3:7:16.86:167,0,17	0/0:6,0:6:11.02:0,11,106	1/1:5,4:9:5.77:170,6,0	0/1:1,7:7:0.36:88,0,0	1/1:4,3:5:8.95:96,9,0	0/1:15,6:18:2.79:325,0,3	0/0:3,0:2:2.98:0,3,21	0/1:20,8:21:74.06:348,0,74	0/1:5,6:11:34.55:254,0,35	./.	1/1:0,2:2:6.02:70,6,0	0/0:4,0:3:6.01:0,6,69	0/0:4,0:3:7.27:0,7,86	1/1:8,13:21:6.80:476,7,0	0/1:13,6:17:48.86:221,0,49	1/1:10,7:17:13.51:310,14,0	1/1:7,9:14:22.42:224,22,0
chr10	65482409	.	CT	C	5810.52	PASS	AB=1.000;AC=39;AF=0.696;AN=56;BaseQRankSum=10.801;DP=474;FS=5.276;HRun=4;HaplotypeScore=70.2034;InbreedingCoeff=0.9130;MQ=65.15;MQ0=17;MQRankSum=-5.805;QD=16.99;ReadPosRankSum=1.705;VQSLOD=4.2606;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:35,0:34:77.81:641,78,0	1/1:6,0:6:17.93:141,18,0	0/1:31,0:9:0.82:1,0,131	0/0:19,0:13:17.83:0,18,180	0/0:16,0:16:39.54:0,40,450	1/1:14,0:14:29.97:252,30,0	1/1:12,0:13:26.96:222,27,0	1/1:7,20:22:60.02:622,60,0	0/0:18,0:18:54.08:0,54,618	0/0:21,0:21:47.22:0,47,697	0/0:22,0:22:48.44:0,48,552	1/1:20,0:19:47.86:389,48,0	0/0:11,0:11:31.10:0,31,321	1/1:9,0:9:17.98:150,18,0	1/1:17,0:17:44.97:377,45,0	1/1:7,0:6:15:133,15,0	1/1:22,0:20:41.92:341,42,0	1/1:1,9:9:21.05:235,21,0	1/1:19,1:21:56.84:464,57,0	1/1:15,0:13:29.83:228,30,0	1/1:11,0:11:17.99:153,18,0	1/1:13,0:13:23.90:193,24,0	0/0:13,0:13:36.99:0,37,471	0/0:11,0:11:27.03:0,27,322	1/1:17,0:17:38.89:322,39,0	1/1:19,0:19:1.79:268,2,0	1/1:23,0:22:50.90:431,51,0	1/1:12,0:11:29.96:250,30,0
chr10	65482412	.	TTA	T	9539.34	PASS	AB=0.529;AC=37;AF=0.661;AN=56;BaseQRankSum=6.291;DP=468;FS=1.310;HRun=0;HaplotypeScore=67.8341;InbreedingCoeff=0.9121;MQ=67.25;MQ0=9;MQRankSum=-4.966;QD=31.59;ReadPosRankSum=3.754;VQSLOD=6.7104;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,34:35:81.05:1162,81,0	1/1:0,5:6:18:234,18,0	0/0:33,0:12:23.76:0,24,288	0/0:18,0:13:23.60:0,24,310	0/0:17,0:17:42.57:0,43,649	1/1:0,15:15:30.10:471,30,0	1/1:1,13:14:26.85:419,27,0	1/1:24,1:23:38.74:460,39,0	0/0:20,0:20:60.07:0,60,921	0/0:21,0:21:62.92:0,63,966	0/0:22,0:22:56.79:0,57,824	1/1:1,19:19:47.98:695,48,0	0/0:11,0:11:33:0,33,468	1/1:0,8:8:18.06:281,18,0	1/1:0,15:16:45.15:689,45,0	1/1:0,7:7:15.05:236,15,0	1/1:0,20:20:42.12:625,42,0	1/1:9,1:9:20.83:168,21,0	1/1:2,19:21:62.98:871,63,0	1/1:1,12:12:32.70:394,33,0	1/1:0,10:10:17.89:284,18,0	1/1:0,13:13:23.56:345,24,0	0/0:13,0:13:39.08:0,39,683	0/0:10,0:10:27.04:0,27,445	1/1:0,16:17:39.07:590,39,0	0/1:2,15:18:33.58:451,0,34	1/1:1,19:22:49.88:695,50,0	1/1:0,11:11:30.10:469,30,0
chr10	65482413	.	TA	T	2252.25	PASS	AB=0.915;AC=40;AF=0.714;AN=56;BaseQRankSum=9.285;DP=468;FS=2.136;HRun=13;HaplotypeScore=85.2424;InbreedingCoeff=0.6217;MQ=67.20;MQ0=9;MQRankSum=-2.675;QD=6.10;ReadPosRankSum=1.530;VQSLOD=2.7648;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:35,0:35:66.88:286,67,0	1/1:6,0:6:12.80:51,13,0	0/1:33,0:12:3.59:4,0,73	0/0:17,1:13:1.98:0,2,141	0/0:15,0:15:27.33:0,27,242	1/1:15,0:15:27.17:114,27,0	1/1:14,0:14:24.11:100,24,0	1/1:25,0:23:19.41:134,19,0	0/0:21,0:21:41.96:0,42,379	0/0:21,0:21:33.53:0,34,346	0/1:16,5:22:20.90:21,0,277	1/1:20,0:19:37.82:160,38,0	0/1:9,2:11:19.81:20,0,143	1/1:8,0:8:16.17:68,16,0	1/1:16,0:16:40.22:170,40,0	1/1:7,0:7:13.72:58,14,0	1/1:20,0:20:34.44:142,34,0	1/1:11,0:10:19.65:96,20,0	1/1:21,0:21:52.14:240,52,0	1/1:14,0:12:21.85:88,22,0	1/1:10,0:10:16.24:69,16,0	1/1:13,0:13:18.75:78,19,0	0/0:12,1:13:11.15:0,11,270	0/0:10,0:10:18.03:0,18,175	1/1:17,0:17:34.36:141,34,0	0/1:18,0:18:18.11:105,0,18	1/1:22,0:22:42.51:181,43,0	1/1:11,0:11:27.02:114,27,0
chr10	65482672	.	CT	C	2132.77	PASS	AB=0.703;AC=28;AF=0.519;AN=54;BaseQRankSum=3.777;DP=410;FS=1.184;HRun=14;HaplotypeScore=58.3488;InbreedingCoeff=0.2119;MQ=73.32;MQ0=3;MQRankSum=-2.052;QD=7.62;ReadPosRankSum=1.642;VQSLOD=2.6180;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,15:26:27.85:189,28,0	./.	0/0:30,0:13:2.48:0,2,61	0/0:20,0:13:7.81:0,8,43	0/0:11,0:11:0.50:0,1,139	1/1:3,9:12:1:121,1,0	0/1:9,8:17:10:85,0,10	0/1:13,17:32:46.69:266,0,47	0/0:14,0:15:32.87:0,33,293	0/0:12,0:13:23.84:0,24,200	0/0:15,1:16:12.34:0,12,234	1/1:8,5:14:16.73:108,17,0	0/0:8,0:9:23.85:0,24,205	1/1:2,9:11:24.73:181,25,0	1/1:5,10:17:8.98:189,9,0	0/1:4,7:12:2.01:123,0,2	0/1:5,5:10:42.99:96,0,43	0/1:8,2:11:17.34:17,0,120	0/1:10,3:15:33.73:34,0,64	0/1:8,4:12:58.28:58,0,79	0/1:13,10:24:2.87:180,0,3	1/1:0,4:4:11.90:82,12,0	0/1:6,1:7:2.67:3,0,104	0/0:14,0:14:33.03:0,33,303	1/1:5,8:15:21.84:135,22,0	0/1:4,14:19:9.02:226,0,9	1/1:4,10:15:26.10:172,26,0	1/1:3,2:5:5.91:41,6,0
chr10	65482740	.	GATATAT	G	2234.85	PASS	AB=0.690;AC=29;AF=0.604;AN=48;BaseQRankSum=8.301;DP=233;FS=30.773;HRun=0;HaplotypeScore=82.7461;InbreedingCoeff=0.6289;MQ=58.26;MQ0=0;MQRankSum=-6.795;QD=18.94;ReadPosRankSum=1.544;VQSLOD=1.3546;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:9,7:16:15.05:316,15,0	./.	0/0:9,0:8:3.47:0,3,29	./.	0/0:16,0:16:18.06:0,18,615	1/1:4,4:9:12.04:254,12,0	1/1:3,4:7:6.02:97,6,0	0/0:26,0:26:57.20:0,57,1586	0/0:7,0:8:15.51:0,16,185	0/0:13,0:13:36.12:0,36,1072	0/0:17,0:17:24.08:0,24,765	./.	0/0:4,0:4:6.02:0,6,178	1/1:2,2:4:3.01:66,3,0	1/1:5,1:6:6:58,6,0	1/1:4,1:5:6:89,6,0	1/1:6,2:8:15.03:280,15,0	1/1:2,0:7:2.77:7,3,0	1/1:4,2:5:6.02:118,6,0	1/1:1,3:4:6.02:127,6,0	1/1:5,2:7:3.01:63,3,0	./.	0/0:5,0:5:9.03:0,9,252	0/0:4,0:4:9.03:0,9,194	1/1:3,4:7:9.02:153,9,0	0/1:11,9:20:99:563,0,111	1/1:5,3:8:6.02:116,6,0	1/1:2,1:4:6.02:102,6,0
chr10	65482749	.	ATATATATG	A	2288.35	PASS	AB=0.895;AC=27;AF=0.540;AN=50;BaseQRankSum=6.050;DP=225;FS=35.359;HRun=0;HaplotypeScore=83.1801;InbreedingCoeff=0.6308;MQ=37.80;MQ0=2;MQRankSum=-6.934;QD=20.43;ReadPosRankSum=1.257;VQSLOD=1.2106;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:10,2:12:14.26:317,14,0	0/0:1,2:3:3.01:0,3,34	0/0:3,0:2:3.48:0,3,47	./.	0/0:16,0:16:18.06:0,18,811	1/1:11,1:12:10.14:252,10,0	1/1:7,0:7:5.14:80,5,0	0/0:28,0:23:57.20:0,57,1608	0/0:7,0:7:15.51:0,16,307	0/0:12,0:12:36.12:0,36,1313	0/0:18,0:18:23.94:0,24,944	./.	0/0:2,0:2:6.02:0,6,211	1/1:3,1:4:3.01:64,3,0	1/1:5,2:7:5.13:56,5,0	1/1:5,2:7:5.41:106,5,0	1/1:6,3:9:14.24:292,14,0	0/0:6,0:6:18.05:0,18,225	1/1:5,1:5:2.89:120,3,0	1/1:5,0:5:6.02:128,6,0	1/1:6,0:6:3.01:63,3,0	./.	0/0:5,0:5:9.03:0,9,305	0/0:3,0:3:9.03:0,9,227	1/1:7,1:8:9.02:153,9,0	0/1:15,2:17:99:579,0,156	1/1:5,2:7:6.02:135,6,0	1/1:5,0:5:8.96:121,9,0
chr10	65482782	.	T	TATAA	1381.13	PASS	AB=0.792;AC=28;AF=0.519;AN=54;BaseQRankSum=6.210;DP=175;FS=18.708;HRun=0;HaplotypeScore=60.5660;InbreedingCoeff=0.3723;MQ=33.03;MQ0=6;MQRankSum=-4.330;QD=13.95;ReadPosRankSum=-3.520;VQSLOD=0.2839;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,6:10:17.37:152,17,0	1/1:3,0:3:2.92:17,3,0	0/0:1,0:1:0:0,0,0	./.	0/0:10,0:10:18.06:0,18,347	1/1:5,6:11:14.90:159,15,0	1/1:5,1:6:11.62:118,12,0	0/0:22,0:14:26.97:0,27,413	0/0:5,0:5:8.80:0,9,171	0/0:9,0:9:27.09:0,27,496	0/0:13,0:13:11.91:0,12,221	0/0:4,0:4:0:0,0,0	0/0:1,0:1:3.01:0,3,58	1/1:1,0:2:0.89:2,1,0	1/1:0,1:2:2.60:10,3,0	1/1:3,0:4:0.47:1,0,0	0/1:5,1:6:27.91:67,0,28	0/0:7,0:7:21.07:0,21,381	0/1:6,1:5:35.89:250,0,36	1/1:8,2:9:6.02:75,6,0	1/1:4,0:4:3.48:37,3,0	1/1:1,0:1:2.90:16,3,0	0/0:2,0:2:3.01:0,3,58	0/0:2,0:2:3.01:0,3,58	1/1:5,2:7:9.03:111,9,0	0/1:8,5:12:99:353,0,141	1/1:8,0:8:6.01:80,6,0	0/1:3,1:5:50.15:95,0,50
chr10	65483461	.	CT	C	750.39	PASS	AB=0.633;AC=28;AF=0.500;AN=56;BaseQRankSum=-6.341;DP=217;FS=21.500;HRun=12;HaplotypeScore=52.0437;InbreedingCoeff=0.1604;MQ=63.43;MQ0=1;MQRankSum=-4.522;QD=5.96;ReadPosRankSum=-2.730;VQSLOD=-0.1646;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,6:6:2.10:21,2,0	0/1:1,1:2:8.09:17,0,8	0/1:7,2:8:31.51:32,0,57	0/0:8,0:8:6.01:0,6,61	0/1:12,1:13:10.35:10,0,243	1/1:0,3:2:2.99:23,3,0	0/1:2,4:4:8.61:58,0,9	1/1:8,5:11:10.97:76,11,0	0/0:14,0:14:33.07:0,33,335	0/0:16,0:16:36.07:0,36,365	0/0:15,0:16:35.80:0,36,321	1/1:1,2:3:8.95:67,9,0	0/0:7,0:7:18:0,18,172	0/1:1,3:4:14.91:37,0,15	0/1:2,5:7:5.63:38,0,6	1/1:0,4:5:11.95:93,12,0	1/1:2,8:9:2.54:84,3,0	1/1:0,0:5:8.14:24,8,0	1/1:0,3:3:8.97:70,9,0	0/0:2,3:5:0.47:0,0,1	1/1:1,2:3:2.99:23,3,0	0/1:1,4:6:8.69:41,0,9	0/0:8,0:8:17.89:0,18,159	0/0:14,0:15:29.89:0,30,288	0/1:2,8:10:12.54:75,0,13	0/1:2,5:7:18.50:55,0,18	0/1:1,6:7:4.72:78,0,5	0/0:2,0:2:2.98:0,3,21
chr10	65484167	.	T	TCTC	20103.78	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-3.255;DP=585;FS=15.718;HRun=0;HaplotypeScore=104.1559;InbreedingCoeff=0.9985;MQ=86.73;MQ0=0;MQRankSum=-10.022;QD=57.60;ReadPosRankSum=2.545;VQSLOD=5.4432;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,24:30:78.15:1630,78,0	1/1:2,5:8:21.06:439,21,0	0/0:23,0:23:54.13:0,54,792	0/0:28,0:28:78.26:0,78,1307	0/0:25,0:25:63.17:0,63,1040	1/1:1,18:19:48.16:1102,48,0	1/1:2,18:19:51.17:1143,51,0	0/0:23,0:23:57.17:0,57,900	0/0:18,0:18:51.17:0,51,864	0/0:19,0:19:48.16:0,48,813	0/0:27,0:27:78.23:0,78,1249	1/1:1,11:12:33.11:741,33,0	0/0:17,0:17:51.13:0,51,813	1/1:4,9:13:33.10:710,33,0	1/1:4,15:19:57.14:1217,57,0	1/1:3,22:25:75.21:1650,75,0	1/1:2,22:25:65.78:1426,66,0	0/0:15,0:15:45.15:0,45,757	1/1:2,13:15:45.14:971,45,0	1/1:6,24:30:72.23:1569,72,0	1/1:1,23:24:51.13:1111,51,0	1/1:2,21:23:60.19:1314,60,0	0/0:16,0:16:45.14:0,45,734	0/0:25,0:25:75.19:0,75,1149	1/1:2,25:28:75.20:1627,75,0	1/1:6,20:26:21.03:1415,21,0	1/1:5,18:23:66.23:1486,66,0	1/1:0,8:8:24.08:553,24,0
chr10	65484219	.	TTTG	T	10081.07	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=15.528;DP=606;FS=36.745;HRun=0;HaplotypeScore=155.7338;InbreedingCoeff=0.9911;MQ=68.05;MQ0=2;MQRankSum=-10.413;QD=31.02;ReadPosRankSum=2.357;VQSLOD=3.3972;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:22,5:26:72.51:839,73,0	1/1:7,0:7:21.04:248,21,0	0/0:28,0:21:46.94:0,47,657	0/0:38,0:28:48.15:0,48,816	0/0:29,0:29:81.28:0,81,1645	1/1:8,6:14:39.11:508,39,0	1/1:15,2:17:41.48:507,41,0	0/0:36,0:36:85.18:0,85,1842	0/0:16,0:16:45.11:0,45,870	0/0:36,0:36:99:0,105,2070	0/0:32,0:32:87.20:0,87,1665	1/1:5,3:7:18.05:250,18,0	0/0:19,0:19:48.14:0,48,963	1/1:13,3:16:40.25:477,40,0	1/1:22,4:26:72.06:886,72,0	1/1:19,1:20:57.08:666,57,0	1/1:18,4:22:51.03:677,51,0	1/1:5,10:15:45.14:656,45,0	1/1:14,6:20:51.15:713,51,0	1/1:21,3:24:63.14:777,63,0	1/1:10,2:11:15:178,15,0	1/1:8,3:11:30.07:390,30,0	0/0:23,0:23:66.18:0,66,1316	0/0:24,0:24:53.37:0,53,1141	1/1:22,3:24:62.47:716,62,0	1/1:19,4:23:57.71:668,58,0	1/1:31,2:32:69.11:787,69,0	1/1:5,0:5:12.03:139,12,0
chr10	65484227	.	TG	T	7942.03	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=17.300;DP=623;FS=56.983;HRun=1;HaplotypeScore=144.0356;InbreedingCoeff=0.9509;MQ=68.55;MQ0=3;MQRankSum=-9.755;QD=23.15;ReadPosRankSum=3.586;VQSLOD=0.8920;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:12,15:26:60.53:654,61,0	1/1:1,6:8:16.77:224,17,0	0/0:31,0:24:51:0,51,634	0/0:33,0:23:28.29:0,28,634	0/0:29,0:29:87.28:0,87,1276	1/1:11,4:15:34.55:300,35,0	1/1:6,12:17:33.96:446,34,0	0/0:36,0:36:99:0,105,1507	0/0:18,0:18:54.15:0,54,768	0/0:38,0:38:99:0,114,1645	0/0:31,0:31:90.26:0,90,1302	1/1:3,4:6:16.86:140,17,0	0/0:18,0:18:51.17:0,51,777	1/1:3,13:16:41.67:467,42,0	1/1:7,19:26:65.96:712,66,0	1/1:4,17:21:54.53:635,55,0	1/1:10,13:24:47.25:526,47,0	1/1:16,0:16:18.34:149,18,0	1/1:16,7:23:44.90:389,45,0	1/1:9,17:26:56.68:683,57,0	1/1:6,6:10:0.65:131,1,0	1/1:9,5:15:19.29:242,19,0	0/0:24,0:24:72.23:0,72,1080	0/0:22,0:22:59.56:0,60,885	1/1:5,18:23:58.82:654,59,0	1/1:9,17:26:56.74:627,57,0	1/1:5,27:32:69.32:817,69,0	1/1:4,4:8:9.16:144,9,0
chr10	65484233	.	G	GT	2976.69	PASS	AB=1.000;AC=39;AF=0.696;AN=56;BaseQRankSum=10.339;DP=619;FS=8.043;HRun=10;HaplotypeScore=160.1950;InbreedingCoeff=0.9102;MQ=69.26;MQ0=3;MQRankSum=-2.319;QD=7.21;ReadPosRankSum=-0.396;VQSLOD=0.4830;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:25:9.96:83,10,0	1/1:8,0:9:19.20:96,19,0	0/1:28,0:23:0.79:1,0,166	0/0:30,0:21:35.63:0,36,277	0/0:26,1:28:38.93:0,39,512	1/1:11,0:14:18.61:78,19,0	1/1:16,0:18:32.26:153,32,0	1/1:10,25:35:72.16:757,72,0	0/0:17,0:17:50.93:0,51,416	0/0:35,0:35:89.88:0,90,739	0/0:29,1:31:47.92:0,48,586	1/1:7,0:6:6.67:26,7,0	0/0:15,1:17:12:0,12,294	1/1:16,0:16:22.37:96,22,0	1/1:24,2:27:23.38:194,23,0	1/1:20,0:21:31.89:156,32,0	1/1:24,0:26:40.56:174,41,0	1/1:6,10:16:35.98:356,36,0	1/1:14,0:17:26.76:123,27,0	1/1:23,0:28:43.35:184,43,0	1/1:12,0:10:10.89:49,11,0	1/1:11,1:15:21.56:122,22,0	0/0:25,0:25:68.89:0,69,564	0/0:22,0:23:52.96:0,53,425	1/1:22,0:21:12.23:111,12,0	1/1:25,0:27:40.20:200,40,0	1/1:32,0:33:37.08:151,37,0	1/1:4,2:11:13.64:78,14,0
chr10	65484438	.	ACCTCAGC	A	124.78	PASS	AB=0.623;AC=2;AF=0.036;AN=56;BaseQRankSum=-1.398;DP=413;FS=36.803;HRun=0;HaplotypeScore=164.8552;InbreedingCoeff=-0.0392;MQ=70.33;MQ0=0;MQRankSum=5.049;QD=4.30;ReadPosRankSum=-4.407;VQSLOD=-0.3763;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:57.19:0,57,1746	0/0:9,0:9:27.09:0,27,885	0/0:11,0:11:13.44:0,13,552	0/0:6,0:6:15.52:0,16,546	0/1:9,9:18:98.14:98,0,1026	0/0:10,0:10:30.10:0,30,955	0/0:18,0:18:51.17:0,51,1661	0/0:20,0:20:60.21:0,60,1874	0/0:26,0:26:78.27:0,78,2555	0/0:10,0:10:24.08:0,24,959	0/1:3,8:11:99:115,0,255	0/0:7,0:7:21.07:0,21,692	0/0:14,0:14:42.12:0,42,1511	0/0:13,0:13:39.13:0,39,1325	0/0:23,0:23:66.21:0,66,2162	0/0:20,0:20:60.21:0,60,1884	0/0:25,0:25:75.26:0,75,2324	0/0:12,0:12:36.12:0,36,1064	0/0:22,0:22:66.23:0,66,2047	0/0:10,0:10:27.09:0,27,832	0/0:18,0:18:45.15:0,45,1471	0/0:12,0:12:33.11:0,33,937	0/0:12,5:17:36.12:0,36,1447	0/0:20,0:20:60.21:0,60,2464	0/0:7,0:7:21.07:0,21,608	0/0:11,0:11:33.11:0,33,1037	0/0:17,0:17:47.85:0,48,1415	0/0:6,0:6:18.06:0,18,408
chr10	65484486	.	AAATGAG	A	16184.43	PASS	AB=0.531;AC=31;AF=0.574;AN=54;BaseQRankSum=15.199;DP=570;FS=0.679;HRun=0;HaplotypeScore=168.0208;InbreedingCoeff=0.9228;MQ=77.70;MQ0=0;MQRankSum=-18.298;QD=52.89;ReadPosRankSum=2.274;VQSLOD=5.0005;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,20:27:42.14:959,42,0	1/1:0,6:6:18.06:425,18,0	0/0:22,0:22:63.21:0,63,2107	0/0:19,0:19:51.18:0,51,1720	0/0:24,0:24:66.23:0,66,2305	1/1:3,14:17:36.12:851,36,0	1/1:0,15:15:42.14:992,42,0	0/0:21,0:21:60.20:0,60,2060	0/0:35,0:35:99:0,102,3605	0/0:31,0:31:87.30:0,87,3031	0/0:22,0:22:51.18:0,51,1750	1/1:0,14:14:39.13:921,39,0	0/0:19,0:19:54.19:0,54,1848	1/1:4,16:20:42.14:958,42,0	1/1:1,25:26:66.23:1560,66,0	1/1:2,16:18:48.13:1084,48,0	1/1:4,15:19:36.12:851,36,0	0/0:15,0:15:45.11:0,45,1487	1/1:5,23:28:69.19:1474,69,0	1/1:1,22:23:60.12:1316,60,0	1/1:6,11:17:27.01:536,27,0	1/1:2,15:17:33.11:780,33,0	0/0:25,0:25:63.22:0,63,2211	0/0:31,0:31:93.32:0,93,3280	1/1:2,13:15:33.11:779,33,0	0/1:2,15:17:99:1012,0,163	1/1:1,26:27:72.25:1688,72,0	./.
chr10	65484787	.	CT	C	12101.20	PASS	AB=0.517;AC=33;AF=0.589;AN=56;BaseQRankSum=18.617;DP=659;FS=8.428;HRun=3;HaplotypeScore=103.4859;InbreedingCoeff=0.9431;MQ=97.60;MQ0=0;MQRankSum=-7.591;QD=32.01;ReadPosRankSum=3.682;VQSLOD=4.5276;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,44:44:99:1567,132,0	1/1:1,8:9:24.07:286,24,0	0/0:29,0:29:84.27:0,84,1172	0/0:39,0:38:96.28:0,96,1341	0/0:21,0:21:63.21:0,63,899	1/1:2,19:21:61.41:704,61,0	1/1:0,31:31:81.25:964,81,0	0/0:29,0:29:81.27:0,81,1167	0/0:21,0:21:63.21:0,63,906	0/0:28,0:28:78.26:0,78,1119	0/0:12,0:12:36.12:0,36,518	1/1:2,22:24:63.19:748,63,0	0/0:20,0:20:60.19:0,60,848	1/1:0,18:18:51.15:606,51,0	1/1:0,21:21:54.16:642,54,0	0/1:1,14:15:1.08:423,0,1	1/1:1,28:29:78.71:928,79,0	0/0:21,0:21:63.21:0,63,907	1/1:2,21:23:64.96:756,65,0	1/1:1,27:28:78.23:926,78,0	1/1:2,26:28:69.21:818,69,0	1/1:0,26:26:69.21:816,69,0	0/0:25,0:25:72.20:0,72,1009	0/0:36,0:36:99:0,105,1495	1/1:0,14:14:36.11:425,36,0	1/1:2,22:24:25.99:745,26,0	1/1:0,21:21:57.17:678,57,0	1/1:0,2:2:6.02:70,6,0
chr10	65485091	.	CA	C	12416.33	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=14.485;DP=746;FS=18.183;HRun=1;HaplotypeScore=181.5052;InbreedingCoeff=0.9892;MQ=57.54;MQ0=5;MQRankSum=-9.841;QD=32.25;ReadPosRankSum=-2.262;VQSLOD=1.9356;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,30:32:49.26:901,49,0	1/1:0,5:5:12.04:167,12,0	0/0:45,0:24:65.13:0,65,979	0/0:54,0:38:99:0,100,1448	0/0:22,0:21:63.21:0,63,1007	1/1:0,15:15:36.12:502,36,0	1/1:5,25:31:60.68:1028,61,0	0/0:40,0:38:99:0,111,1705	0/0:36,0:35:99:0,105,1656	0/0:29,0:29:87.30:0,87,1392	0/0:18,0:18:54.17:0,54,840	1/1:0,26:24:69.23:962,69,0	0/0:28,0:28:81.28:0,81,1286	1/1:1,27:26:69.02:961,69,0	1/1:2,23:24:69.23:962,69,0	1/1:0,17:17:48.16:669,48,0	1/1:1,23:24:17.04:597,17,0	0/0:17,0:17:48.16:0,48,750	1/1:1,20:21:17.44:782,17,0	1/1:0,29:29:54.05:754,54,0	1/1:10,43:52:96.86:1320,97,0	1/1:0,16:16:33.11:461,33,0	0/0:18,0:18:54.17:0,54,840	0/0:51,0:51:99:0,144,2301	1/1:1,19:20:54.11:753,54,0	1/1:2,19:21:14.81:758,15,0	1/1:0,15:14:42.14:586,42,0	1/1:0,6:6:18.06:251,18,0
chr10	65485104	.	A	AAC	10276.83	PASS	AB=0.693;AC=33;AF=0.589;AN=56;BaseQRankSum=9.779;DP=765;FS=30.585;HRun=0;HaplotypeScore=211.0136;InbreedingCoeff=0.7724;MQ=58.00;MQ0=6;MQRankSum=-10.924;QD=24.01;ReadPosRankSum=-5.565;VQSLOD=3.0181;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:16,15:32:22.20:804,22,0	1/1:1,4:5:12.04:199,12,0	0/0:54,0:24:19.86:0,20,336	0/0:60,0:40:62.73:0,63,609	0/0:18,0:17:45.10:0,45,546	1/1:4,10:14:30.10:484,30,0	1/1:11,22:35:59.02:954,59,0	1/1:36,0:35:38.99:702,39,0	0/0:37,0:36:87.27:0,87,1086	0/0:28,0:28:69.22:0,69,866	0/0:15,0:15:42.13:0,42,529	1/1:13,20:31:18.04:937,18,0	0/0:28,0:28:75.23:0,75,932	1/1:8,20:25:48.15:764,48,0	1/1:18,8:25:45.12:639,45,0	1/1:3,14:17:48.16:778,48,0	0/1:11,8:20:18.86:346,0,19	0/0:5,0:17:36.31:0,36,175	1/1:17,6:23:12.88:350,13,0	1/1:13,14:28:20.48:516,20,0	0/1:24,19:47:5.06:382,0,5	1/1:4,11:15:33.11:486,33,0	0/0:18,0:18:38.94:0,39,453	0/0:58,0:58:99:0,153,1874	1/1:8,14:22:4.26:548,4,0	1/1:7,15:22:51.15:785,51,0	0/1:8,9:16:7.76:405,0,8	1/1:2,4:6:12.04:199,12,0
chr10	65485107	.	A	ACT	6622.14	PASS	AB=0.994;AC=24;AF=0.429;AN=56;BaseQRankSum=7.936;DP=754;FS=31.332;HRun=0;HaplotypeScore=217.3064;InbreedingCoeff=0.0679;MQ=60.09;MQ0=6;MQRankSum=-10.742;QD=15.92;ReadPosRankSum=0.889;VQSLOD=2.9457;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:32,0:31:55.44:404,0,55	1/1:5,0:5:12.03:126,12,0	0/0:57,0:23:22.65:0,23,606	0/0:66,0:42:81.43:0,81,1001	0/0:18,0:17:48.15:0,48,702	1/1:15,0:15:8.06:279,8,0	0/1:36,0:36:79.42:452,0,79	1/1:2,35:37:59.40:1620,59,0	0/0:35,0:34:96.29:0,96,1403	0/0:26,0:26:78.25:0,78,1141	0/0:16,0:16:42.14:0,42,634	0/1:33,0:31:42.33:529,0,42	0/0:27,0:27:78.25:0,78,1169	1/1:27,0:24:1.68:439,2,0	0/1:23,0:24:27.01:319,0,27	1/1:17,0:17:47.98:485,48,0	0/1:18,0:18:78.87:170,0,79	0/0:17,0:17:50.18:0,50,327	0/1:22,0:21:99:121,0,261	0/1:26,0:26:87.78:245,0,88	0/1:45,0:45:82.76:172,0,83	1/1:15,0:15:9.86:260,10,0	0/0:17,0:17:48.07:0,48,651	0/0:58,0:58:99:0,162,2388	0/1:21,0:21:49.03:300,0,49	0/1:20,0:20:22.81:363,0,23	0/1:16,0:15:58.68:234,0,59	0/1:6,0:6:22.92:103,0,23
chr10	65485155	.	T	TAC	8040.27	PASS	AB=0.771;AC=33;AF=0.611;AN=54;BaseQRankSum=10.130;DP=740;FS=9.937;HRun=0;HaplotypeScore=198.4930;InbreedingCoeff=0.7535;MQ=47.92;MQ0=36;MQRankSum=-9.421;QD=20.00;ReadPosRankSum=-0.233;VQSLOD=4.3832;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,13:18:26.77:438,27,0	1/1:2,5:7:18.06:266,18,0	./.	0/0:47,0:13:9.42:0,9,86	0/0:19,0:18:48.15:0,48,594	0/1:9,8:17:32.09:347,0,32	1/1:22,13:35:11.28:834,11,0	0/0:40,0:37:77.84:0,78,913	0/0:35,0:35:96.26:0,96,1148	0/0:35,0:33:69.20:0,69,835	0/0:17,0:17:25.57:0,26,297	1/1:13,16:29:17:757,17,0	0/0:25,0:25:45.12:0,45,541	1/1:14,8:20:14.80:433,15,0	1/1:6,17:22:45.14:691,45,0	1/1:7,16:22:10.96:661,11,0	0/1:5,7:12:4.10:375,0,4	0/1:26,0:26:14.94:15,0,558	1/1:21,3:21:33.09:448,33,0	1/1:13,6:18:21:289,21,0	1/1:32,14:42:9.08:190,9,0	1/1:11,13:23:27.06:417,27,0	0/0:23,0:23:44.78:0,45,551	0/0:51,0:51:21.03:0,21,1141	1/1:11,9:19:20.83:308,21,0	1/1:11,17:28:23.07:852,23,0	1/1:11,6:16:30.08:423,30,0	1/1:2,6:8:18.06:295,18,0
chr10	65485157	.	C	CAA	4368.75	PASS	AB=0.975;AC=23;AF=0.411;AN=56;BaseQRankSum=13.787;DP=753;FS=16.090;HRun=1;HaplotypeScore=216.4300;InbreedingCoeff=-0.0026;MQ=48.74;MQ0=35;MQRankSum=-9.832;QD=10.73;ReadPosRankSum=4.960;VQSLOD=-0.2442;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:18:4.65:237,5,0	1/1:7,0:7:17.88:159,18,0	0/0:44,0:10:13.71:0,14,121	0/0:49,0:15:26.57:0,27,237	0/0:20,0:19:57.14:0,57,806	0/1:19,0:19:72.62:238,0,73	0/1:34,1:34:99:390,0,111	0/0:45,0:41:99:0,111,1409	0/0:36,0:36:99:0,105,1530	0/0:37,0:35:99:0,99,1312	0/0:17,0:17:38.70:0,39,481	0/1:26,0:26:44.82:425,0,45	0/0:24,0:24:69.10:0,69,876	0/1:22,0:20:38.81:231,0,39	1/1:22,1:22:44.87:437,45,0	0/1:23,0:22:20.91:379,0,21	0/1:11,2:13:10.99:319,0,11	0/1:26,2:28:41.21:41,0,812	0/1:23,0:19:99:151,0,133	0/1:19,0:18:26.89:119,0,27	0/1:46,6:47:82.95:100,0,83	1/1:24,0:23:4.22:210,4,0	0/0:22,0:22:56.72:0,57,771	0/0:51,0:51:92.64:0,93,1648	0/1:19,0:18:12.93:151,0,13	0/1:28,0:28:99:404,0,119	1/1:17,0:16:11.28:218,11,0	0/1:9,0:9:17.89:157,0,18
chr10	65485189	.	A	AAC	824.66	PASS	AB=0.921;AC=7;AF=0.125;AN=56;BaseQRankSum=1.765;DP=689;FS=9.073;HRun=0;HaplotypeScore=214.7984;InbreedingCoeff=0.1600;MQ=51.54;MQ0=9;MQRankSum=-2.421;QD=4.77;ReadPosRankSum=-5.243;VQSLOD=0.3749;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:22,1:22:14.81:15,0,96	0/0:5,0:5:5.75:0,6,22	0/0:44,0:21:4.63:0,5,539	0/0:40,0:19:15.92:0,16,327	0/0:19,0:19:54.04:0,54,698	0/1:18,1:19:8.75:9,0,114	0/0:26,0:24:30.57:0,31,115	1/1:17,17:32:54.01:749,54,0	0/0:31,0:31:90.27:0,90,1195	0/0:32,0:32:90.19:0,90,1148	0/0:13,0:13:33.11:0,33,448	0/0:26,0:26:46.90:0,47,204	0/0:13,0:13:33.11:0,33,444	0/0:21,0:21:30.47:0,30,124	0/0:29,1:30:2.29:0,2,150	0/0:18,0:17:43.02:0,43,206	0/1:16,3:19:91.91:108,0,92	0/0:24,0:24:17.03:0,17,389	0/0:23,0:21:11.36:0,11,117	0/1:13,0:13:1.30:1,0,54	0/1:52,13:64:69.15:69,0,146	0/0:23,0:23:16.65:0,17,104	0/0:17,0:17:45.14:0,45,602	0/0:42,0:42:99:0,99,1297	0/0:18,0:18:29.33:0,29,121	0/0:24,0:24:51.21:0,51,206	0/0:17,0:17:31.31:0,31,127	0/0:9,0:9:24.11:0,24,100
chr10	65485193	.	CAT	C	11395.60	PASS	AB=0.797;AC=35;AF=0.625;AN=56;BaseQRankSum=9.207;DP=689;FS=1.868;HRun=0;HaplotypeScore=173.6081;InbreedingCoeff=0.7629;MQ=52.28;MQ0=9;MQRankSum=-4.409;QD=26.38;ReadPosRankSum=-3.268;VQSLOD=4.5631;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,15:23:39.93:639,40,0	1/1:0,4:4:9.03:127,9,0	0/0:50,0:24:63.50:0,63,986	0/0:42,0:21:10.42:0,10,414	0/0:19,0:19:57.04:0,57,1001	1/1:2,17:19:39.04:668,39,0	1/1:7,16:21:54.14:734,54,0	0/1:31,0:29:31.84:101,0,32	0/0:32,0:32:73.29:0,73,1624	0/0:31,0:31:81.20:0,81,1471	0/0:12,0:12:33.10:0,33,592	1/1:5,20:25:67.69:944,68,0	0/0:12,0:12:33.11:0,33,619	1/1:0,21:21:48.01:634,48,0	1/1:3,27:30:66.13:997,66,0	0/1:2,16:17:9.73:635,0,10	1/1:6,14:20:24:603,24,0	0/1:21,4:25:99:129,0,410	1/1:9,15:22:53.80:721,54,0	1/1:1,12:13:24.06:343,24,0	1/1:20,47:66:63.35:907,63,0	1/1:0,20:20:51.02:674,51,0	0/0:16,0:16:45.14:0,45,835	0/0:41,0:41:99:0,105,1803	1/1:5,14:19:45.12:630,45,0	1/1:5,19:24:66.67:959,67,0	1/1:3,13:16:39.03:540,39,0	1/1:0,9:9:27.09:411,27,0
chr10	65485238	.	TACACACAC	T	307.22	PASS	AB=0.966;AC=20;AF=0.435;AN=46;BaseQRankSum=-2.114;DP=617;FS=11.243;HRun=0;HaplotypeScore=194.3177;InbreedingCoeff=0.3045;MQ=45.20;MQ0=37;MQRankSum=2.564;QD=1.15;ReadPosRankSum=3.349;VQSLOD=2.1199;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:28:3.48:0,3,40	./.	./.	./.	1/1:18,4:20:5.77:53,6,0	0/1:20,0:20:0:0,0,0	0/0:19,0:14:2.49:0,2,6	0/0:25,0:23:2.03:0,2,5	0/1:26,0:26:22.91:23,0,85	0/0:20,0:20:15.05:0,15,312	./.	0/0:25,0:21:2.38:0,2,6	1/1:12,0:12:5.96:64,6,0	0/1:18,0:15:0:0,0,0	0/1:22,0:23:0:0,0,0	0/1:7,0:8:0:0,0,0	0/1:21,0:20:0:0,0,0	0/0:18,0:14:6.25:0,6,24	0/1:18,0:17:0:0,0,0	0/1:13,0:12:0:0,0,0	0/0:67,0:58:5.50:0,6,64	1/1:18,0:17:2.22:7,2,0	1/1:12,1:13:2.20:24,2,0	1/1:26,0:28:9.02:146,9,0	0/1:12,0:12:0.04:0,0,0	./.	0/0:20,0:18:3.01:0,3,52	0/1:10,0:11:39.66:100,0,40
chr10	65485686	.	GCATACACACACACA	G	3909.88	PASS	AB=0.963;AC=29;AF=0.518;AN=56;BaseQRankSum=1.953;DP=371;FS=0.000;HRun=0;HaplotypeScore=136.3419;InbreedingCoeff=0.7224;MQ=61.75;MQ0=13;MQRankSum=-1.917;QD=19.36;ReadPosRankSum=3.002;VQSLOD=2.3583;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:27,1:25:41.76:419,42,0	1/1:2,0:2:2.99:24,3,0	0/0:26,0:19:42.31:0,42,388	0/0:24,0:15:34.92:0,35,346	0/0:11,0:9:24.01:0,24,709	1/1:13,0:13:17.97:189,18,0	0/1:23,0:22:99:209,0,177	0/0:21,0:20:56.99:0,57,503	0/0:5,0:5:12:0,12,156	0/0:8,0:8:20.79:0,21,776	0/0:7,0:7:15:0,15,469	1/1:9,1:10:15.02:337,15,0	0/0:9,0:9:25.82:0,26,524	1/1:5,2:7:15:235,15,0	1/1:11,0:16:42.01:424,42,0	1/1:9,1:10:20.93:267,21,0	0/1:21,2:24:12.32:604,0,12	0/0:14,0:14:35.76:0,36,312	1/1:8,0:7:20.90:167,21,0	1/1:7,0:7:8.98:72,9,0	1/1:23,0:21:11.89:90,12,0	0/0:7,0:7:0:0,0,0	0/0:9,0:9:21.04:0,21,818	0/0:28,0:28:60.03:0,60,2397	1/1:11,1:12:26.88:360,27,0	0/1:7,0:7:6.09:119,0,6	1/1:4,1:5:11.93:191,12,0	1/1:6,0:7:17.78:204,18,0
chr10	65485687	.	CAT	C	2467.65	PASS	AB=1.000;AC=31;AF=0.554;AN=56;BaseQRankSum=2.354;DP=372;FS=0.485;HRun=0;HaplotypeScore=72.5166;InbreedingCoeff=0.7300;MQ=60.14;MQ0=14;MQRankSum=-0.043;QD=11.75;ReadPosRankSum=2.912;VQSLOD=3.4499;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:25:41.74:317,42,0	1/1:2,0:2:2.99:24,3,0	0/0:25,0:18:43.48:0,43,389	0/0:24,0:15:35.08:0,35,350	0/0:11,0:9:20.41:0,20,200	1/1:13,0:13:17.95:141,18,0	0/1:23,0:22:23.66:210,0,24	0/0:22,0:21:56.99:0,57,503	0/0:5,0:5:11.98:0,12,99	0/1:8,0:8:5.08:5,0,202	0/0:7,0:7:14.92:0,15,147	1/1:10,0:10:14.94:117,15,0	0/0:9,0:9:23.96:0,24,196	1/1:7,0:7:11.98:97,12,0	1/1:16,0:16:41.95:346,42,0	1/1:10,0:10:20.91:165,21,0	1/1:24,0:24:53.59:395,54,0	0/0:14,0:14:35.13:0,35,247	1/1:9,0:8:20.90:167,21,0	1/1:6,0:6:8.98:72,9,0	1/1:22,0:20:11.89:90,12,0	0/0:0,7:7:0:0,0,0	0/0:10,0:10:21:0,21,238	0/0:28,0:28:59.95:0,60,690	1/1:12,0:12:26.69:203,27,0	0/1:7,0:7:6.09:119,0,6	1/1:5,0:5:11.92:89,12,0	1/1:7,0:7:17.77:120,18,0
chr10	65485749	.	C	CAAGGG	11783.97	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=6.786;DP=427;FS=6.123;HRun=0;HaplotypeScore=111.7751;InbreedingCoeff=0.9666;MQ=58.77;MQ0=6;MQRankSum=-11.888;QD=46.03;ReadPosRankSum=-4.890;VQSLOD=3.5693;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:5,14:21:40.23:823,40,0	1/1:4,4:8:21.07:591,21,0	0/0:41,0:24:30.33:0,30,429	0/0:44,0:28:19.36:0,19,699	0/0:13,0:13:30.03:0,30,501	1/1:2,5:7:15.05:407,15,0	1/1:10,13:23:34.83:863,35,0	1/1:12,4:16:30:620,30,0	0/0:10,0:10:21.06:0,21,368	0/0:16,0:16:27.09:0,27,515	0/0:9,0:9:21.07:0,21,400	1/1:6,13:18:42.14:1084,42,0	0/0:5,0:5:12.04:0,12,229	1/1:4,10:14:27.05:615,27,0	1/1:7,9:18:33.02:741,33,0	1/1:2,7:11:24.08:693,24,0	1/1:7,8:20:21.07:577,21,0	1/1:3,7:10:21.07:587,21,0	1/1:7,6:13:24.05:538,24,0	1/1:4,8:9:21.07:500,21,0	1/1:7,9:16:18.11:359,18,0	1/1:3,2:5:10.28:247,10,0	0/0:10,0:10:14.98:0,15,220	0/0:23,0:23:56.78:0,57,1050	1/1:4,8:12:33.06:829,33,0	1/1:4,9:13:32.95:753,33,0	1/1:7,8:15:27.09:763,27,0	1/1:1,2:3:9:195,9,0
chr10	65485980	.	G	GA	2990.63	PASS	AB=0.665;AC=25;AF=0.446;AN=56;BaseQRankSum=-0.178;DP=485;FS=1.502;HRun=12;HaplotypeScore=76.4014;InbreedingCoeff=0.2016;MQ=54.54;MQ0=11;MQRankSum=-0.522;QD=8.98;ReadPosRankSum=-2.521;VQSLOD=2.4213;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:16,28:45:50.32:392,0,50	1/1:1,7:7:9.01:88,9,0	0/0:3,0:2:5.97:0,6,44	0/0:10,0:4:5.23:0,5,40	0/0:16,0:17:13.82:0,14,93	0/1:5,9:16:1.04:138,0,1	0/1:13,12:26:33.68:210,0,34	1/1:9,7:15:2.33:154,2,0	0/0:15,1:17:8.63:0,9,215	0/0:16,0:15:31.85:0,32,224	0/0:8,0:8:8.94:0,9,66	1/1:4,15:21:32.04:329,32,0	0/0:13,1:15:2.61:0,3,171	1/1:1,10:11:12.90:116,13,0	0/1:7,9:16:35.68:172,0,36	1/1:3,3:7:2.17:52,2,0	0/1:13,27:42:1.03:585,0,1	0/0:24,0:26:62.15:0,62,419	0/1:12,5:16:17.93:107,0,18	1/1:7,13:18:17.84:142,18,0	1/1:9,10:19:18.03:175,18,0	0/1:7,2:10:31.44:33,0,31	0/0:6,0:6:11.69:0,12,87	0/0:31,0:32:69.62:0,70,493	0/1:8,15:22:0.87:154,0,1	0/1:11,5:15:0.82:142,0,1	0/1:3,5:8:9.89:75,0,10	0/1:5,5:9:25.78:99,0,26
chr10	65486333	.	T	TCA	1038.14	PASS	AC=36;AF=0.818;AN=44;BaseQRankSum=-0.009;DP=532;FS=3.280;HRun=0;HaplotypeScore=111.6220;InbreedingCoeff=0.5175;MQ=70.96;MQ0=7;MQRankSum=0.028;QD=2.73;ReadPosRankSum=-2.210;VQSLOD=2.1887;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:22:3.01:42,3,0	1/1:10,0:8:3:25,3,0	./.	./.	./.	./.	1/1:39,0:39:8.69:82,9,0	1/1:17,0:17:11.85:80,12,0	0/0:11,0:18:8.52:0,9,42	1/1:16,0:16:0.47:1,0,0	./.	1/1:17,0:15:4.56:47,5,0	0/0:11,0:11:2.96:0,3,31	1/1:28,0:28:16.25:129,16,0	1/1:18,0:18:4.81:29,5,0	1/1:15,0:15:2.97:20,3,0	1/1:28,0:28:12.33:90,12,0	1/1:19,0:18:9.17:75,9,0	1/1:18,0:18:11.53:89,12,0	./.	1/1:38,17:53:8.60:67,9,0	1/1:15,0:15:3.01:41,3,0	0/0:7,0:8:2.59:0,3,10	0/0:27,0:27:14.70:0,15,136	1/1:18,0:17:8.52:92,9,0	1/1:22,0:22:11.31:76,11,0	1/1:13,0:13:13.32:117,13,0	1/1:8,0:7:8:66,8,0
chr10	65486561	.	AT	A	969.04	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.499;DP=530;FS=1.582;HRun=1;HaplotypeScore=55.6053;InbreedingCoeff=0.8210;MQ=90.22;MQ0=0;MQRankSum=-2.968;QD=35.89;ReadPosRankSum=0.936;VQSLOD=3.7156;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,114,1788	0/0:3,0:3:9.01:0,9,120	0/0:25,0:25:57.92:0,58,940	0/0:24,0:24:72.17:0,72,1047	0/0:8,0:8:24.08:0,24,381	0/0:16,0:16:42.14:0,42,671	0/0:15,0:15:45.15:0,45,719	0/0:23,0:23:69.24:0,69,1101	0/0:23,0:23:63.21:0,63,1003	0/0:12,0:12:36.11:0,36,555	0/0:4,0:4:12.04:0,12,192	0/0:17,0:17:51.17:0,51,815	0/0:18,0:18:54.17:0,54,839	0/0:20,0:20:57.19:0,57,908	0/0:30,0:30:87.28:0,87,1365	0/0:18,0:18:54.17:0,54,837	0/0:40,0:40:99:0,120,1919	1/1:2,25:27:57.30:1064,57,0	0/0:21,0:21:63.21:0,63,1007	0/0:4,0:4:9.03:0,9,144	0/0:60,0:60:99:0,181,2852	0/0:7,0:7:21.07:0,21,335	0/0:7,0:7:21.07:0,21,336	0/0:25,0:25:69.24:0,69,1103	0/0:11,0:10:33.11:0,33,527	0/0:12,0:12:33.11:0,33,527	0/0:18,0:17:48.16:0,48,760	0/0:3,0:3:9.03:0,9,144
chr10	65487638	.	CT	C	2553.65	PASS	AB=0.758;AC=34;AF=0.607;AN=56;BaseQRankSum=4.707;DP=421;FS=5.835;HRun=14;HaplotypeScore=48.6851;InbreedingCoeff=0.4499;MQ=69.32;MQ0=2;MQRankSum=3.374;QD=8.48;ReadPosRankSum=5.277;VQSLOD=2.3631;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,14:20:37.22:252,37,0	0/1:2,7:9:4.03:120,0,4	0/0:16,0:11:1.23:0,1,25	0/1:9,1:6:13.65:15,0,14	0/1:15,2:17:11.20:11,0,177	1/1:5,10:16:31.74:211,32,0	1/1:2,9:12:16.85:109,17,0	0/0:25,1:28:2.29:0,2,241	0/0:12,1:13:1.30:0,1,140	0/1:17,1:18:4.87:5,0,212	0/0:20,1:21:12.44:0,12,251	1/1:4,5:9:5.82:41,6,0	0/0:10,0:10:11.99:0,12,105	0/1:6,4:11:10.88:36,0,11	1/1:3,10:13:26.73:183,27,0	1/1:3,5:8:17.83:123,18,0	1/1:6,17:23:38.61:266,39,0	0/0:3,0:12:9.77:0,10,46	1/1:8,18:28:7.83:326,8,0	1/1:7,13:20:15.05:170,15,0	1/1:1,8:9:23.78:164,24,0	1/1:0,2:3:7.99:47,8,0	0/0:6,0:7:12.74:0,13,100	0/0:13,0:13:7.86:0,8,197	1/1:3,12:17:30.76:197,31,0	1/1:11,12:22:20.56:143,21,0	1/1:7,14:23:30.67:197,31,0	0/1:2,10:11:4.02:120,0,4
chr10	65487783	.	C	CTT	1286.80	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=-7.158;DP=427;FS=3.321;HRun=9;HaplotypeScore=49.0074;InbreedingCoeff=0.6786;MQ=68.41;MQ0=2;MQRankSum=-3.889;QD=22.19;ReadPosRankSum=-5.146;VQSLOD=1.1879;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:54.12:0,54,574	0/0:15,0:15:39.09:0,39,415	0/1:15,0:12:1.49:1,0,151	0/0:9,0:6:15.03:0,15,159	0/0:22,0:22:60.12:0,60,629	0/0:18,0:18:48.10:0,48,503	0/0:7,0:7:8.99:0,9,96	1/1:6,30:35:90.24:1340,90,0	0/0:12,0:12:33.07:0,33,351	0/0:22,0:22:63.15:0,63,671	0/0:18,0:18:45.06:0,45,463	0/0:11,0:11:27.05:0,27,280	0/0:11,0:11:30.06:0,30,312	0/0:7,0:7:8.73:0,9,75	0/0:14,0:14:39.06:0,39,404	0/0:9,0:9:23.27:0,23,230	0/0:19,0:19:45.01:0,45,463	1/1:3,0:7:6.01:57,6,0	0/0:23,0:23:4.72:0,5,436	0/0:13,0:13:36.09:0,36,383	0/0:5,0:5:11.99:0,12,111	0/0:4,0:4:9:0,9,87	0/0:14,0:14:39.07:0,39,406	0/0:8,0:8:21.04:0,21,224	0/0:19,0:19:54.13:0,54,574	0/0:19,0:19:48.10:0,48,504	0/0:34,0:34:94.47:0,94,991	0/0:14,0:14:33.06:0,33,351
chr10	65488311	.	AATGCTACC	A	1567.61	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.229;DP=606;FS=4.374;HRun=0;HaplotypeScore=146.6250;InbreedingCoeff=0.9699;MQ=95.68;MQ0=0;MQRankSum=-7.507;QD=55.99;ReadPosRankSum=2.177;VQSLOD=3.5589;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:57.20:0,57,2490	0/0:4,0:4:12.04:0,12,525	0/0:28,0:28:66.23:0,66,2566	0/0:29,0:29:81.25:0,81,2966	0/0:23,0:23:69.24:0,69,2959	0/0:27,0:27:75.26:0,75,3250	0/0:20,0:20:57.20:0,57,2266	0/0:30,0:30:78.26:0,78,3092	1/1:4,24:28:60.21:1662,60,0	0/0:22,0:22:60.20:0,60,2424	0/0:16,0:16:48.16:0,48,2006	0/0:17,0:17:51.18:0,51,2193	0/0:17,0:17:45.15:0,45,1861	0/0:15,0:15:45.14:0,45,1778	0/0:24,0:24:66.23:0,66,2700	0/0:23,0:23:66.23:0,66,2837	0/0:23,0:23:60.21:0,60,2624	0/0:18,0:18:54.19:0,54,2349	0/0:14,0:14:39.13:0,39,1605	0/0:22,0:22:63.22:0,63,2659	0/0:29,0:29:78.25:0,78,3300	0/0:31,0:31:87.29:0,87,3685	0/0:13,0:13:33.11:0,33,1429	0/0:25,0:25:75.26:0,75,3214	0/0:15,0:15:45.15:0,45,1959	0/0:21,0:21:63.22:0,63,2596	0/0:33,0:33:93.30:0,93,3731	0/0:14,0:14:42.14:0,42,1807
chr10	65489207	.	T	TTG	2772.29	PASS	AB=1.000;AC=37;AF=0.685;AN=54;BaseQRankSum=-1.908;DP=478;FS=2.409;HRun=0;HaplotypeScore=91.5305;InbreedingCoeff=0.3960;MQ=55.61;MQ0=18;MQRankSum=0.777;QD=7.64;ReadPosRankSum=1.364;VQSLOD=3.4871;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:31,0:30:24.85:225,25,0	0/1:9,0:8:43.66:47,0,44	0/0:15,0:7:2.13:0,2,39	0/0:24,0:11:4.18:0,4,48	0/0:24,0:24:26.94:0,27,217	./.	1/1:19,0:16:5.62:111,6,0	1/1:27,0:25:26.79:198,27,0	1/1:17,0:17:35.75:273,36,0	1/1:26,0:24:16.15:298,16,0	1/1:16,0:14:5.99:50,6,0	1/1:15,0:14:5.08:147,5,0	0/0:8,0:7:11.44:0,11,76	1/1:3,6:8:3.01:46,3,0	0/1:16,0:15:1.38:112,0,1	1/1:10,0:9:20.85:163,21,0	1/1:23,2:24:17.45:275,17,0	0/0:15,0:15:16.52:0,17,191	0/1:13,0:12:9.93:80,0,10	1/1:21,0:19:8.92:149,9,0	1/1:9,0:8:3:25,3,0	1/1:8,0:7:2.05:62,2,0	0/1:15,0:13:9.12:9,0,83	0/0:14,0:13:8.91:0,9,123	1/1:19,0:18:16.66:171,17,0	0/1:22,0:22:55.98:143,0,56	1/1:19,0:16:26.69:201,27,0	1/1:15,0:13:12.98:158,13,0
chr10	65489277	.	G	GGA	5173.77	PASS	AB=0.916;AC=28;AF=0.500;AN=56;BaseQRankSum=-0.523;DP=436;FS=47.646;HRun=0;HaplotypeScore=76.4202;InbreedingCoeff=0.5340;MQ=57.21;MQ0=13;MQRankSum=1.815;QD=20.05;ReadPosRankSum=2.489;VQSLOD=2.9853;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:29,1:29:11.93:101,12,0	0/1:9,0:9:20.82:167,0,21	0/0:11,0:5:11.40:0,11,151	0/0:29,0:15:26.79:0,27,450	0/0:13,0:13:17.87:0,18,250	1/1:14,0:14:24.03:334,24,0	1/1:23,0:20:36.04:543,36,0	0/0:22,0:20:57.43:0,57,764	0/0:22,0:21:38.56:0,39,534	0/0:15,0:15:39.42:0,39,498	0/0:10,0:10:5.98:0,6,92	0/1:11,0:11:10.19:351,0,10	0/0:10,0:9:24.55:0,25,338	1/1:7,0:7:11.96:168,12,0	0/1:12,0:12:12.38:316,0,12	1/1:11,0:11:10.18:276,10,0	0/1:8,19:29:28.53:135,0,29	0/0:11,0:10:27.55:0,28,363	0/1:11,0:9:21.34:158,0,21	1/1:2,12:15:27.01:304,27,0	1/1:24,0:23:25.17:645,25,0	1/1:11,0:10:21.03:283,21,0	0/0:6,0:6:12.04:0,12,177	0/0:27,0:27:51.17:0,51,750	1/1:12,0:12:21.02:282,21,0	0/1:10,1:10:10.40:289,0,10	1/1:11,0:11:6.53:276,7,0	1/1:17,0:15:42.02:546,42,0
chr10	65489651	.	T	TTC	763.68	PASS	AB=0.947;AC=30;AF=0.652;AN=46;BaseQRankSum=0.827;DP=658;FS=23.234;HRun=0;HaplotypeScore=110.0209;InbreedingCoeff=0.1953;MQ=68.35;MQ0=14;MQRankSum=-1.461;QD=1.61;ReadPosRankSum=-2.457;VQSLOD=0.3012;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:49,0:48:9.46:108,9,0	1/1:15,0:15:2.88:15,3,0	./.	0/1:43,0:22:0:0,0,0	./.	1/1:16,0:16:1.22:2,1,0	1/1:23,8:31:4.26:47,4,0	1/1:40,0:40:12.62:68,13,0	1/1:30,0:30:12:117,12,0	1/1:25,0:25:17.13:126,17,0	0/0:17,0:17:0:0,0,0	0/0:14,0:14:2.83:0,3,24	0/1:12,0:12:0:1,0,0	1/1:15,0:15:2.62:22,3,0	0/1:25,0:25:22.80:74,0,23	0/1:15,3:21:41.73:110,0,42	1/1:23,0:23:6.02:84,6,0	0/1:12,0:16:17.17:17,0,46	./.	./.	1/1:36,0:34:5.94:67,6,0	0/1:24,0:24:0.01:0,0,0	./.	0/0:24,0:25:14.95:0,15,117	0/1:13,0:13:0:0,0,0	0/0:24,0:24:0.46:0,0,1	0/1:26,0:26:18.44:20,0,18	1/1:14,0:12:2.19:4,2,0
chr10	65490160	.	GGT	G	499.62	PASS	AB=0.933;AC=28;AF=0.609;AN=46;BaseQRankSum=3.027;DP=534;FS=1.305;HRun=0;HaplotypeScore=88.4602;InbreedingCoeff=0.3915;MQ=63.83;MQ0=9;MQRankSum=-0.334;QD=1.69;ReadPosRankSum=1.946;VQSLOD=1.4292;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:26:2.80:13,3,0	1/1:5,3:8:6.02:64,6,0	./.	./.	./.	0/1:11,2:13:26.05:26,0,36	1/1:22,1:25:8.69:60,9,0	0/0:29,0:28:1.25:0,1,3	1/1:23,0:29:10.89:50,11,0	0/0:19,0:18:9:0,9,96	0/0:6,0:6:3.01:0,3,42	1/1:20,1:21:3.01:32,3,0	0/0:19,0:19:6:0,6,65	./.	1/1:15,4:20:11.86:110,12,0	1/1:11,0:12:2.84:14,3,0	1/1:14,5:18:8.86:78,9,0	0/0:19,0:21:12.02:0,12,137	./.	0/0:13,0:13:0.47:0,0,1	1/1:47,4:51:5.85:46,6,0	1/1:18,0:18:2.84:14,3,0	0/0:10,0:10:3.01:0,3,42	0/0:28,0:27:15.02:0,15,178	1/1:9,0:9:2.99:23,3,0	0/1:19,0:19:34.84:39,0,35	1/1:13,0:13:5.96:45,6,0	1/1:5,3:8:3:31,3,0
chr10	65490329	.	C	CCTGCTG	25246.57	PASS	AB=0.560;AC=37;AF=0.661;AN=56;BaseQRankSum=-8.743;DP=514;FS=68.380;HRun=0;HaplotypeScore=95.4895;InbreedingCoeff=0.9005;MQ=77.14;MQ0=0;MQRankSum=-15.862;QD=80.40;ReadPosRankSum=0.656;VQSLOD=2.5815;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,31:45:99:3905,111,0	1/1:0,6:6:12.04:431,12,0	0/0:25,0:25:72.25:0,72,1662	0/0:25,0:25:72.21:0,72,1443	0/0:21,0:21:63.22:0,63,1427	1/1:0,13:14:33.11:1169,33,0	1/1:5,15:21:51.17:1765,51,0	1/1:12,18:33:93.28:3008,93,0	0/0:32,0:32:93.31:0,93,2155	0/0:20,0:20:57.20:0,57,1349	0/0:12,0:12:36.12:0,36,846	1/1:5,13:20:48.16:1676,48,0	0/0:17,0:17:48.16:0,48,1153	1/1:3,11:14:36.12:1244,36,0	1/1:2,7:9:12.04:431,12,0	1/1:2,8:12:27.09:969,27,0	1/1:6,14:22:51.17:1781,51,0	1/1:2,6:8:18.06:648,18,0	1/1:3,10:14:42.11:1382,42,0	1/1:2,8:11:27.09:969,27,0	1/1:10,13:26:51.18:1810,51,0	1/1:2,10:12:33.11:1184,33,0	0/0:19,0:19:54.18:0,54,1201	0/0:29,0:29:81.25:0,81,1774	1/1:2,9:12:24.08:812,24,0	0/1:3,10:14:39.07:884,0,39	1/1:3,8:16:24.08:856,24,0	1/1:0,3:3:9.03:323,9,0
chr10	65490508	.	C	CA	179.78	PASS	AC=20;AF=1.000;AN=20;DP=22;FS=0.000;HRun=0;HaplotypeScore=9.4179;InbreedingCoeff=-0.1402;MQ=72.10;MQ0=0;QD=12.84;VQSLOD=3.6278;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	1/1:0,1:1:2.94:18,3,0	./.	1/1:0,1:1:2.94:18,3,0	./.	./.	./.	./.	./.	./.	./.	1/1:0,1:1:2.94:18,3,0	./.	1/1:1,0:1:2.96:19,3,0	1/1:1,0:1:2.97:20,3,0	./.	1/1:1,2:3:8.54:44,9,0	./.	1/1:1,0:1:3:28,3,0	./.	1/1:1,0:0:2.97:20,3,0	./.	1/1:0,1:1:2.99:24,3,0	1/1:1,2:3:5.94:42,6,0	./.
chr10	65490748	.	TG	T	3081.63	PASS	AB=0.857;AC=48;AF=0.960;AN=50;BaseQRankSum=-2.397;DP=124;FS=0.000;HRun=4;HaplotypeScore=23.3023;InbreedingCoeff=0.0845;MQ=64.48;MQ0=0;MQRankSum=-2.397;QD=25.47;ReadPosRankSum=1.232;VQSLOD=2.0375;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,8:8:21.01:232,21,0	1/1:0,1:1:3.01:36,3,0	0/1:5,1:3:7.57:8,0,32	0/1:5,1:3:0.17:0,0,0	./.	1/1:1,5:6:15.05:179,15,0	1/1:0,2:2:3.01:36,3,0	1/1:1,0:1:3.01:36,3,0	1/1:0,6:6:18.05:215,18,0	1/1:0,2:2:6.02:72,6,0	1/1:0,6:5:12.04:140,12,0	1/1:0,3:3:9.03:105,9,0	1/1:0,5:5:12.04:144,12,0	1/1:0,4:4:12.04:144,12,0	1/1:0,6:6:15.05:178,15,0	./.	1/1:2,7:8:27.04:305,27,0	1/1:2,1:3:9:94,9,0	./.	1/1:0,13:13:30.09:355,30,0	1/1:0,2:1:3.01:36,3,0	1/1:0,4:4:9.03:105,9,0	1/1:0,5:5:9.03:107,9,0	1/1:0,3:3:2.94:36,3,0	1/1:1,7:8:18.05:215,18,0	1/1:1,0:1:3.01:36,3,0	1/1:0,3:3:9.03:107,9,0	1/1:1,7:8:21.06:252,21,0
chr10	65490787	.	G	GAA	5778.79	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-2.813;DP=288;FS=31.918;HRun=10;HaplotypeScore=48.2934;InbreedingCoeff=0.8647;MQ=55.02;MQ0=3;MQRankSum=-1.910;QD=28.75;ReadPosRankSum=2.505;VQSLOD=2.8771;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,11:16:31.99:375,32,0	1/1:0,4:4:5.98:65,6,0	0/0:19,0:9:16.86:0,17,160	0/0:11,0:7:11.64:0,12,97	0/0:4,0:4:7.25:0,7,61	1/1:0,10:11:29.59:411,30,0	1/1:4,5:9:20.42:258,20,0	0/0:23,0:22:57.05:0,57,573	0/0:3,0:3:6.01:0,6,60	0/0:4,0:4:8.96:0,9,81	0/0:5,0:5:11.88:0,12,117	1/1:2,6:8:18.02:244,18,0	0/0:5,0:5:12.02:0,12,122	1/1:3,4:7:6.02:89,6,0	1/1:3,9:13:23.52:306,24,0	1/1:4,4:8:18.06:248,18,0	1/1:1,18:18:39.13:582,39,0	0/0:4,0:5:11.76:0,12,103	1/1:12,5:13:21.05:287,21,0	1/1:3,15:17:45.15:659,45,0	1/1:0,4:6:9.02:118,9,0	1/1:3,3:6:14.94:165,15,0	0/0:2,0:2:3.01:0,3,31	0/0:5,0:5:12:0,12,122	1/1:3,15:18:33.11:491,33,0	1/1:1,13:14:11.81:513,12,0	1/1:0,10:11:27.08:387,27,0	1/1:3,13:16:39.13:582,39,0
chr10	65491453	.	ACTTTT	A	1479.53	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=3.562;DP=617;FS=0.712;HRun=0;HaplotypeScore=133.2459;InbreedingCoeff=0.9532;MQ=83.75;MQ0=9;MQRankSum=-4.513;QD=25.96;ReadPosRankSum=-2.981;VQSLOD=2.7615;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:72.24:0,72,2021	0/0:9,0:9:24.07:0,24,594	0/0:61,0:30:11.39:0,11,420	0/0:83,0:39:59.87:0,60,922	0/0:16,0:16:27.09:0,27,747	0/0:22,0:22:48.12:0,48,1217	0/0:11,0:11:24.07:0,24,627	1/1:15,23:36:60.12:945,60,0	0/0:17,0:17:45.13:0,45,1125	0/0:22,0:22:48.16:0,48,1300	0/0:14,0:14:36.11:0,36,939	0/0:19,0:19:45.14:0,45,1099	0/0:12,0:12:27.09:0,27,764	0/0:8,0:8:21.06:0,21,519	0/0:24,0:24:51.09:0,51,1095	0/0:17,0:17:42.10:0,42,989	0/0:35,0:34:87.23:0,87,2308	1/1:6,13:19:36.08:656,36,0	0/0:26,0:26:60.17:0,60,1361	0/0:19,0:19:45.05:0,45,1103	0/0:6,0:6:12.02:0,12,272	0/0:7,0:7:15.05:0,15,396	0/0:17,0:17:27.06:0,27,687	0/0:12,0:12:28.31:0,28,654	0/0:13,0:13:36.10:0,36,867	0/0:26,0:26:54.18:0,54,1551	0/0:20,0:20:54.13:0,54,1299	0/0:16,0:16:39.13:0,39,1062
chr10	65491757	.	G	GTATATA	3595.64	PASS	AB=0.702;AC=31;AF=0.574;AN=54;BaseQRankSum=0.086;DP=267;FS=1.448;HRun=0;HaplotypeScore=65.2487;InbreedingCoeff=0.6267;MQ=80.47;MQ0=3;MQRankSum=-7.885;QD=26.06;ReadPosRankSum=3.847;VQSLOD=3.0272;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:1,10:11:0:0,0,0	1/1:0,3:3:3.01:103,3,0	0/0:15,0:12:29.98:0,30,485	0/0:22,0:12:12.04:0,12,195	0/0:7,0:7:18.01:0,18,328	1/1:4,8:12:15.52:519,16,0	1/1:6,0:6:3:25,3,0	0/0:43,0:42:99:0,109,1978	0/0:7,0:7:5.40:0,5,158	0/0:6,0:6:18.05:0,18,362	0/0:6,0:6:18.04:0,18,372	1/1:0,10:10:9.03:310,9,0	0/0:5,0:5:15.02:0,15,234	1/1:0,7:8:9.03:310,9,0	1/1:0,9:9:3.01:103,3,0	1/1:1,6:7:3.01:102,3,0	1/1:4,8:12:5.93:127,6,0	0/1:8,0:8:5.13:236,0,5	1/1:4,2:6:12:309,12,0	1/1:2,0:2:2.92:75,3,0	1/1:7,0:7:9:87,9,0	./.	0/0:4,0:4:6.02:0,6,142	0/0:11,0:11:30.04:0,30,571	0/1:2,4:7:0:0,0,0	1/1:0,2:3:6:127,6,0	1/1:2,11:14:15.05:512,15,0	1/1:4,6:12:0.10:651,0,0
chr10	65491761	.	G	GTATATA	3962.78	PASS	AB=1.000;AC=34;AF=0.630;AN=54;BaseQRankSum=-1.398;DP=251;FS=3.315;HRun=0;HaplotypeScore=62.5552;InbreedingCoeff=0.5382;MQ=80.35;MQ0=4;MQRankSum=-7.995;QD=23.31;ReadPosRankSum=3.334;VQSLOD=3.1179;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:10,0:10:0:0,0,0	1/1:3,0:3:2.41:102,2,0	0/0:17,0:11:22.10:0,22,218	0/0:27,0:14:10.42:0,10,89	0/0:6,0:6:15.05:0,15,318	1/1:11,0:11:15.52:517,16,0	1/1:6,0:6:3:25,3,0	0/1:42,0:41:66.68:67,0,692	1/1:5,0:6:3.01:46,3,0	0/0:7,0:7:21.05:0,21,371	0/0:6,0:6:15.05:0,15,351	1/1:9,0:9:9.03:311,9,0	0/0:5,0:5:11.99:0,12,122	1/1:9,0:9:12.02:334,12,0	1/1:5,0:5:3.01:103,3,0	1/1:6,0:6:3.01:102,3,0	0/1:10,0:10:33.04:115,0,33	1/1:1,6:8:17.99:460,18,0	1/1:5,0:5:15:336,15,0	1/1:2,0:2:2.92:75,3,0	1/1:5,0:5:2.96:19,3,0	./.	0/0:2,0:2:6.02:0,6,142	0/0:10,0:10:24:0,24,329	0/1:6,0:6:0:0,0,0	1/1:2,0:2:3.01:104,3,0	1/1:12,0:11:18.04:535,18,0	1/1:13,0:13:18.73:713,19,0
chr10	65491763	.	ATG	A	613.38	PASS	AB=0.975;AC=13;AF=0.232;AN=56;BaseQRankSum=-3.864;DP=251;FS=0.724;HRun=0;HaplotypeScore=57.0635;InbreedingCoeff=0.1086;MQ=81.38;MQ0=4;MQRankSum=0.265;QD=6.32;ReadPosRankSum=-0.718;VQSLOD=2.5672;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:8.23:0,8,36	0/1:3,0:3:15.83:38,0,16	0/0:18,0:12:23.58:0,24,188	0/0:30,0:14:14.68:0,15,107	0/1:5,0:5:9.35:9,0,151	0/0:11,0:11:8.11:0,8,38	1/1:6,0:6:3:25,3,0	0/1:39,5:43:99:526,0,231	0/1:4,0:4:2.99:19,0,3	0/0:7,0:7:21.05:0,21,320	0/0:6,0:6:5.39:0,5,249	0/0:9,0:9:9:0,9,77	0/0:5,0:5:11.99:0,12,130	0/0:9,0:9:8.74:0,9,64	0/0:5,0:5:5.74:0,6,37	1/1:5,0:5:2.92:17,3,0	0/0:10,0:10:8.69:0,9,55	0/1:8,0:8:2.18:2,0,28	0/1:5,0:5:9.11:9,0,91	0/0:2,0:2:1.87:0,2,6	1/1:4,0:4:2.96:19,3,0	0/0:1,0:1:2.74:0,3,12	0/0:2,0:2:6.02:0,6,116	0/0:9,0:9:23.93:0,24,221	0/0:6,0:6:5.49:0,5,24	0/0:2,0:2:3:0,3,26	0/0:11,0:10:18:0,18,159	0/1:12,1:13:86.33:86,0,98
chr10	65492803	.	C	CA	1828.77	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-5.088;DP=757;FS=1.182;HRun=1;HaplotypeScore=78.7524;InbreedingCoeff=0.9989;MQ=89.15;MQ0=0;MQRankSum=-2.927;QD=38.91;ReadPosRankSum=-3.997;VQSLOD=2.5682;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,132,1682	0/0:13,0:13:39.13:0,39,506	0/0:29,0:29:84.23:0,84,1044	0/0:27,0:27:50.93:0,51,817	0/0:22,0:22:63.20:0,63,817	0/0:24,0:24:69.22:0,69,895	0/0:16,0:16:42.14:0,42,545	1/1:0,27:27:81.23:1150,81,0	0/0:29,0:29:87.27:0,87,1116	0/0:31,0:31:87.26:0,87,1114	0/0:27,0:27:78.24:0,78,998	0/0:31,0:31:93.25:0,93,1174	0/0:24,0:24:69.22:0,69,895	0/0:21,0:21:60.19:0,60,778	0/0:36,0:36:99:0,105,1347	0/0:26,0:26:78.21:0,78,981	0/0:28,0:28:78.25:0,78,1011	1/1:0,20:20:54.18:800,54,0	0/0:25,0:25:75.24:0,75,966	0/0:27,0:27:81.26:0,81,1051	0/0:55,0:55:99:0,156,1994	0/0:33,0:33:99:0,99,1283	0/0:22,0:22:66.20:0,66,842	0/0:27,0:27:78.25:0,78,1013	0/0:21,0:21:54.17:0,54,701	0/0:29,0:29:84.27:0,84,1091	0/0:31,0:31:93.30:0,93,1207	0/0:8,0:8:24.08:0,24,304
chr10	65493091	.	T	TA	800.53	PASS	AB=0.813;AC=5;AF=0.089;AN=56;BaseQRankSum=-5.297;DP=508;FS=2.155;HRun=10;HaplotypeScore=57.9629;InbreedingCoeff=0.3751;MQ=84.80;MQ0=0;MQRankSum=-0.835;QD=9.76;ReadPosRankSum=-1.893;VQSLOD=2.0987;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,1:29:33.88:0,34,478	0/0:9,0:9:26.93:0,27,215	0/1:15,0:18:24.38:24,0,88	0/1:20,0:18:0.29:0,0,60	0/0:22,0:23:61.93:0,62,492	0/0:22,0:22:56.91:0,57,465	0/0:8,0:8:20.94:0,21,169	1/1:7,22:29:46.51:665,47,0	0/0:17,0:17:38.93:0,39,320	0/0:22,0:22:59.93:0,60,493	0/0:31,1:33:63.23:0,63,706	0/0:11,0:11:32.96:0,33,271	0/0:21,0:21:62.39:0,62,495	0/0:12,0:13:31.99:0,32,249	0/0:16,0:16:47.95:0,48,394	0/0:8,0:9:22.98:0,23,175	0/0:21,0:21:53.93:0,54,443	0/1:4,10:14:19.21:226,0,19	0/0:30,0:30:74.87:0,75,613	0/0:26,0:27:70.92:0,71,568	0/0:7,0:7:20.97:0,21,170	0/0:12,0:15:39.07:0,39,289	0/0:20,0:20:50.93:0,51,419	0/0:7,0:7:20.98:0,21,172	0/0:15,0:15:35.96:0,36,296	0/0:17,0:18:46.97:0,47,373	0/0:22,2:24:7.86:0,8,469	0/0:9,0:9:14.97:0,15,123
chr10	65493965	.	AGACGGCG	A	20541.19	PASS	AB=0.514;AC=33;AF=0.589;AN=56;BaseQRankSum=17.693;DP=611;FS=10.788;HRun=0;HaplotypeScore=156.6503;InbreedingCoeff=0.8906;MQ=80.40;MQ0=0;MQRankSum=-18.833;QD=63.79;ReadPosRankSum=4.360;VQSLOD=4.7503;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,44:44:99:2671,102,0	1/1:0,6:6:12.04:289,12,0	0/0:28,0:28:81.26:0,81,2727	0/0:31,0:31:85.69:0,86,3015	0/0:22,0:22:63.22:0,63,2515	1/1:0,16:16:39.13:1079,39,0	1/1:0,18:18:54.18:1455,54,0	0/0:30,0:30:90.29:0,90,3127	0/0:40,0:40:99:0,120,4594	0/0:27,0:27:81.27:0,81,3082	0/0:17,0:17:48.16:0,48,1928	1/1:0,19:19:57.20:1560,57,0	0/0:23,0:23:69.24:0,69,2865	1/1:0,24:24:54.18:1456,54,0	1/1:0,21:21:48.16:1338,48,0	0/1:1,17:18:74.67:1260,0,75	1/1:0,22:22:45.15:1254,45,0	0/0:23,0:23:69.19:0,69,2676	1/1:0,11:11:33.09:738,33,0	1/1:0,31:31:78.27:2165,78,0	1/1:0,19:19:18.06:502,18,0	1/1:0,13:13:21.07:585,21,0	0/0:18,0:18:48.16:0,48,1993	0/0:30,0:30:87.26:0,87,3279	1/1:0,13:13:30.10:827,30,0	1/1:1,19:20:2.16:1270,2,0	1/1:0,21:21:60.21:1673,60,0	1/1:0,6:6:15.05:418,15,0
chr10	65495753	.	A	AT	563.57	PASS	AB=0.854;AC=6;AF=0.107;AN=56;BaseQRankSum=-1.130;DP=588;FS=12.043;HRun=12;HaplotypeScore=95.1882;InbreedingCoeff=0.6349;MQ=76.26;MQ0=0;MQRankSum=-0.390;QD=6.13;ReadPosRankSum=-0.261;VQSLOD=1.0020;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:40:99:0,99,703	0/0:9,0:10:28.86:0,29,200	0/0:30,0:24:28.07:0,28,178	0/0:30,0:23:14.41:0,14,96	0/0:19,0:20:16.20:0,16,232	0/0:22,0:22:44.66:0,45,328	0/0:19,0:21:51.07:0,51,361	0/0:21,0:21:40.16:0,40,295	1/1:2,17:19:14.62:300,15,0	0/0:19,0:20:42.33:0,42,294	0/0:17,0:19:48.81:0,49,340	0/0:19,0:20:40.65:0,41,284	0/0:20,0:20:47.57:0,48,343	0/0:14,0:14:30.59:0,31,215	0/0:18,1:19:21.47:0,21,317	0/1:14,5:19:98.16:98,0,191	0/0:30,0:31:64.35:0,64,461	1/1:6,2:32:51.56:290,52,0	0/1:20,2:22:5.90:6,0,274	0/0:12,0:12:32.40:0,32,228	0/0:15,0:15:35.77:0,36,260	0/0:17,0:17:44.70:0,45,327	0/0:17,0:17:35.65:0,36,251	0/0:22,0:23:57.24:0,57,403	0/0:18,1:19:21.51:0,22,318	0/0:23,0:23:47.64:0,48,350	0/0:19,0:19:47.72:0,48,350	0/0:12,0:12:23.79:0,24,175
chr10	65496248	.	T	TCCC	3999.36	PASS	AB=0.621;AC=33;AF=0.611;AN=54;BaseQRankSum=3.494;DP=370;FS=7.938;HRun=8;HaplotypeScore=91.7594;InbreedingCoeff=0.8286;MQ=97.99;MQ0=0;MQRankSum=-7.282;QD=20.00;ReadPosRankSum=-0.547;VQSLOD=0.7908;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:9,2:12:11.98:132,12,0	1/1:3,1:5:7.27:109,7,0	0/0:24,0:25:66.20:0,66,850	0/0:19,0:19:39.09:0,39,478	0/0:12,0:12:27.06:0,27,349	1/1:5,6:13:17.97:270,18,0	1/1:7,3:16:26.99:319,27,0	0/0:19,0:19:33.05:0,33,421	1/1:0,4:4:12.04:232,12,0	0/0:20,0:20:42.10:0,42,552	0/0:7,0:7:21.07:0,21,276	1/1:5,1:7:9.01:129,9,0	0/0:7,0:8:11.93:0,12,136	1/1:5,0:7:2.99:23,3,0	1/1:2,7:9:18.02:322,18,0	./.	1/1:24,2:31:27.03:425,27,0	0/0:23,0:23:48.15:0,48,630	1/1:12,1:16:27.05:383,27,0	1/1:7,4:11:15.05:292,15,0	1/1:11,6:18:11.76:143,12,0	1/1:3,4:8:4.26:63,4,0	0/0:9,0:9:24.04:0,24,296	0/0:22,0:22:60.18:0,60,788	1/1:7,0:11:18.04:267,18,0	0/1:7,10:18:9.33:472,0,9	1/1:5,3:8:18.04:310,18,0	1/1:0,3:5:8.99:107,9,0
chr10	65496276	.	T	TG	5216.55	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=0.887;DP=400;FS=2.253;HRun=1;HaplotypeScore=87.6328;InbreedingCoeff=0.8845;MQ=72.47;MQ0=1;MQRankSum=-4.842;QD=19.32;ReadPosRankSum=2.160;VQSLOD=5.2857;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,13:19:44.63:537,45,0	1/1:2,2:5:4.85:115,5,0	0/0:20,0:11:17.12:0,17,180	0/0:28,0:16:23.63:0,24,197	0/0:13,1:14:28.31:0,28,311	1/1:10,0:10:16.70:142,17,0	1/1:12,4:16:43.25:386,43,0	1/1:21,1:22:57.88:453,58,0	1/1:5,2:7:3.24:46,3,0	0/0:22,0:21:41.29:0,41,406	0/0:13,0:13:28.87:0,29,284	1/1:1,2:3:6.02:87,6,0	0/0:8,0:8:12.12:0,12,137	1/1:5,1:6:7.81:54,8,0	1/1:6,4:11:32.90:352,33,0	1/1:4,1:5:6.02:86,6,0	1/1:9,17:26:20.10:506,20,0	1/1:24,0:24:43.71:262,44,0	1/1:19,1:20:38.52:308,39,0	1/1:6,9:15:16.87:290,17,0	1/1:9,3:12:14.61:162,15,0	1/1:5,4:9:14.54:178,15,0	0/0:7,0:7:15.50:0,16,162	0/0:18,0:18:43.02:0,43,455	1/1:7,3:10:23.19:216,23,0	1/1:15,9:24:24.72:456,25,0	1/1:12,4:16:36.58:407,37,0	1/1:5,3:9:15.83:172,16,0
chr10	65496277	.	GTTTT	G	443.27	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=1.062;DP=404;FS=4.772;HRun=16;HaplotypeScore=104.2484;InbreedingCoeff=0.4965;MQ=70.14;MQ0=4;MQRankSum=-1.713;QD=10.07;ReadPosRankSum=2.592;VQSLOD=0.2028;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:20:51.59:0,52,867	0/0:5,0:5:9.92:0,10,177	0/0:21,0:10:5.99:0,6,56	0/0:28,0:15:17.86:0,18,215	0/0:16,0:17:32.93:0,33,566	0/0:8,0:9:17.80:0,18,313	0/0:14,0:16:42.03:0,42,662	0/1:21,0:21:34.89:35,0,166	0/0:8,0:8:18.02:0,18,311	0/0:18,0:21:57.15:0,57,1057	0/0:13,0:14:37.87:0,38,579	0/0:2,0:2:6.02:0,6,110	0/0:7,0:8:21.07:0,21,440	0/0:6,0:7:17.58:0,18,189	0/0:12,0:12:36:0,36,553	0/0:5,0:5:12.04:0,12,255	0/0:26,0:26:60.53:0,61,1014	1/1:2,20:22:39.89:514,40,0	0/0:14,0:16:32.91:0,33,403	0/0:14,0:16:34.80:0,35,537	0/0:10,0:10:9.03:0,9,166	0/0:8,0:8:21:0,21,340	0/0:7,0:8:18.06:0,18,347	0/0:15,0:20:47.90:0,48,893	0/0:9,0:10:22.54:0,23,386	0/0:25,0:26:57.04:0,57,828	0/0:16,0:16:27.60:0,28,728	0/0:8,0:10:27.05:0,27,460
chr10	65498514	.	G	GCACA	5606.36	PASS	AB=0.813;AC=38;AF=0.679;AN=56;BaseQRankSum=-3.739;DP=626;FS=8.291;HRun=0;HaplotypeScore=113.9566;InbreedingCoeff=0.5968;MQ=68.88;MQ0=8;MQRankSum=1.413;QD=11.33;ReadPosRankSum=-1.386;VQSLOD=3.6348;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:21,16:40:33.11:784,33,0	1/1:6,1:8:2.74:12,3,0	1/1:36,0:25:0.47:1,0,0	0/1:38,0:25:0:0,0,0	0/0:5,0:12:6.01:0,6,56	1/1:6,2:15:14.52:237,15,0	1/1:15,16:36:29.57:590,30,0	1/1:19,0:19:9.48:98,9,0	1/1:11,1:18:11.94:167,12,0	0/0:14,0:20:28.74:0,29,240	0/0:2,0:12:15.01:0,15,139	1/1:5,8:15:17.79:369,18,0	0/0:13,0:15:21.05:0,21,289	1/1:8,8:20:18.06:419,18,0	1/1:6,8:13:9.03:214,9,0	1/1:5,3:11:11.51:167,12,0	0/1:22,0:36:81.41:81,0,301	0/0:22,0:27:57.10:0,57,720	1/1:10,1:11:7.57:88,8,0	0/1:10,2:13:38.59:75,0,39	1/1:36,22:70:3.97:508,4,0	1/1:12,1:14:23.82:443,24,0	0/0:12,0:14:24.03:0,24,286	0/0:30,0:30:60.20:0,60,920	1/1:10,7:20:11.78:207,12,0	1/1:13,9:26:44.53:644,45,0	0/1:11,6:19:66.16:311,0,66	1/1:6,3:11:14.49:189,14,0
chr10	65498979	.	A	ACACACACACACC	8615.02	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=3.026;DP=588;FS=0.000;HRun=0;HaplotypeScore=175.9237;InbreedingCoeff=0.9281;MQ=56.19;MQ0=21;MQRankSum=-3.688;QD=21.17;ReadPosRankSum=-4.652;VQSLOD=2.6669;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:31,0:30:53.66:568,54,0	1/1:15,0:13:23.84:226,24,0	0/0:31,0:15:32.23:0,32,358	0/0:25,0:15:45.04:0,45,447	0/0:34,0:34:89.84:0,90,1481	1/1:22,0:22:52.27:542,52,0	1/1:15,0:14:39.78:458,40,0	1/1:39,0:36:99:1000,104,0	1/1:2,0:21:8.82:224,9,0	0/0:25,0:24:62.50:0,62,900	0/0:15,0:15:29.98:0,30,497	1/1:17,0:17:33.67:335,34,0	0/0:12,0:12:36.02:0,36,711	1/1:1,0:14:5.98:112,6,0	1/1:3,14:20:11.39:328,11,0	1/1:6,1:7:17.95:307,18,0	1/1:18,1:20:51.73:997,52,0	1/1:13,0:13:35.87:618,36,0	1/1:30,0:30:75.58:549,76,0	1/1:5,0:24:23.91:264,24,0	1/1:4,0:27:9.03:266,9,0	1/1:1,15:21:8.98:198,9,0	0/0:21,0:21:53.85:0,54,655	0/0:18,0:18:44.48:0,44,989	1/1:2,0:23:7.27:206,7,0	1/1:5,12:22:58.33:910,58,0	1/1:4,0:15:16.33:273,16,0	1/1:5,0:6:15.01:232,15,0
chr10	65500113	.	TC	T	12880.21	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=6.290;DP=714;FS=7.565;HRun=5;HaplotypeScore=85.3424;InbreedingCoeff=0.9997;MQ=74.97;MQ0=3;MQRankSum=-1.765;QD=29.07;ReadPosRankSum=5.037;VQSLOD=5.0160;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,37:42:99:1123,99,0	1/1:1,12:13:33.09:374,33,0	0/0:42,1:34:81.98:0,82,913	0/0:43,0:38:92.38:0,92,963	0/0:27,0:27:78.23:0,78,1032	1/1:1,23:24:63.18:715,63,0	1/1:0,30:30:66.19:749,66,0	0/0:35,0:34:78.26:0,78,1061	1/1:1,24:25:69.20:783,69,0	0/0:19,0:19:48.12:0,48,633	0/0:15,0:15:39.12:0,39,516	1/1:3,29:32:78.22:885,78,0	0/0:16,0:16:48.16:0,48,653	1/1:2,19:21:54.15:612,54,0	1/1:1,35:36:90.26:1021,90,0	1/1:2,29:31:78.22:885,78,0	1/1:1,21:22:60.17:681,60,0	0/0:26,0:26:72.18:0,72,946	1/1:1,21:22:63.17:705,63,0	1/1:1,16:17:45.12:505,45,0	1/1:3,39:42:99:1225,108,0	1/1:0,14:14:42.12:476,42,0	0/0:10,0:10:27.09:0,27,368	0/0:36,0:36:99:0,102,1360	1/1:1,11:12:30.09:340,30,0	1/1:0,30:30:84.24:952,84,0	1/1:0,13:13:33.09:374,33,0	1/1:0,17:17:42.12:476,42,0
chr10	65500246	.	GT	G	6384.64	PASS	AB=0.950;AC=40;AF=0.714;AN=56;BaseQRankSum=13.720;DP=532;FS=6.808;HRun=11;HaplotypeScore=91.6587;InbreedingCoeff=0.8436;MQ=65.46;MQ0=0;MQRankSum=2.448;QD=16.58;ReadPosRankSum=4.013;VQSLOD=5.4783;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,30:35:62.91:517,63,0	1/1:0,9:9:26.97:221,27,0	0/0:11,0:11:15.34:0,15,224	0/1:8,0:5:6.06:6,0,20	0/0:22,0:24:59.54:0,60,605	1/1:3,14:17:38.93:318,39,0	1/1:8,8:16:23.47:216,23,0	0/0:34,0:34:61.37:0,61,802	1/1:1,18:19:41.95:345,42,0	0/0:25,0:25:51.13:0,51,544	0/0:22,0:22:63.14:0,63,658	1/1:1,13:14:32.96:271,33,0	0/0:9,1:10:11.09:0,11,231	1/1:3,15:19:37.96:297,38,0	1/1:3,24:27:68.92:567,69,0	1/1:0,13:14:40.99:326,41,0	1/1:4,21:25:30.93:460,31,0	1/1:5,16:22:52.90:417,53,0	1/1:3,12:15:6.96:258,7,0	1/1:5,24:29:22.67:492,23,0	1/1:2,6:8:14.98:123,15,0	1/1:4,12:16:32.75:260,33,0	0/1:16,2:18:1.18:1,0,392	0/0:18,2:20:7.85:0,8,494	1/1:4,12:16:20.30:192,20,0	1/1:4,18:22:53.89:437,54,0	1/1:2,19:21:44.95:369,45,0	1/1:3,12:15:35.92:291,36,0
chr10	65500625	.	ACG	A	16523.34	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=18.000;DP=658;FS=3.926;HRun=0;HaplotypeScore=106.1059;InbreedingCoeff=0.9999;MQ=74.53;MQ0=2;MQRankSum=-4.827;QD=40.60;ReadPosRankSum=1.935;VQSLOD=6.8073;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,38:38:99:1569,105,0	1/1:0,13:13:30.06:433,30,0	0/0:28,0:28:78.27:0,78,1446	0/0:20,0:19:51.17:0,51,967	0/0:30,0:30:87.30:0,87,1678	1/1:0,14:14:36.12:551,36,0	1/1:2,13:15:36.12:551,36,0	0/0:36,0:36:99:0,105,1973	1/1:0,17:16:48.16:735,48,0	0/0:30,0:30:87.24:0,87,1640	0/0:17,0:17:48.12:0,48,875	1/1:0,32:32:93.27:1398,93,0	0/0:22,0:22:66.23:0,66,1273	1/1:0,17:17:48.16:735,48,0	1/1:0,24:24:66.22:1010,66,0	1/1:0,21:20:54.18:827,54,0	1/1:1,28:29:69.23:1057,69,0	0/0:21,0:20:60.21:0,60,1158	1/1:1,23:24:72.24:1082,72,0	1/1:0,30:30:78.22:1168,78,0	1/1:0,27:27:69.19:1031,69,0	1/1:1,15:16:42.14:641,42,0	0/0:20,0:20:57.20:0,57,1099	0/0:27,0:27:75.21:0,75,1409	1/1:0,22:22:63.21:964,63,0	1/1:0,28:28:84.29:1282,84,0	1/1:0,21:21:60.16:893,60,0	1/1:0,19:18:39.13:597,39,0
chr10	65501773	.	CTTTT	C	6255.15	PASS	AB=0.820;AC=36;AF=0.643;AN=56;BaseQRankSum=8.154;DP=614;FS=0.856;HRun=18;HaplotypeScore=117.3784;InbreedingCoeff=0.8028;MQ=66.14;MQ0=4;MQRankSum=-1.156;QD=16.91;ReadPosRankSum=7.963;VQSLOD=1.7515;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,26:36:6.11:567,6,0	1/1:4,4:9:11.84:132,12,0	0/0:38,0:16:6.97:0,7,259	0/0:37,0:14:11.72:0,12,111	0/0:24,0:26:43.01:0,43,740	1/1:3,18:22:41.87:498,42,0	1/1:9,8:17:23.50:291,24,0	0/0:19,0:32:51:0,51,609	1/1:4,5:9:9.33:110,9,0	0/0:25,0:31:75.22:0,75,1272	0/0:14,0:17:33.07:0,33,524	1/1:2,11:13:26.93:310,27,0	0/0:18,0:19:39.07:0,39,676	0/1:7,9:16:6.68:262,0,7	1/1:7,12:19:32.72:401,33,0	1/1:4,7:12:18.41:205,18,0	1/1:9,20:30:47.68:602,48,0	0/1:14,0:14:23.42:59,0,23	1/1:13,11:24:12.86:313,13,0	1/1:12,22:33:37.23:359,37,0	1/1:6,7:13:17.69:202,18,0	1/1:5,10:16:24.68:235,25,0	0/0:16,0:18:38.98:0,39,523	0/0:21,0:23:42.35:0,42,776	1/1:6,18:24:44.18:480,44,0	1/1:5,18:25:23.16:505,23,0	1/1:9,21:31:47.39:555,47,0	1/1:1,4:6:14.94:169,15,0
chr10	65503233	.	AT	A	252.33	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.562;DP=299;FS=5.830;HRun=13;HaplotypeScore=33.9546;InbreedingCoeff=0.5012;MQ=71.48;MQ0=4;MQRankSum=-0.332;QD=10.51;ReadPosRankSum=0.888;VQSLOD=2.1887;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:27.04:0,27,263	0/0:7,0:7:15.02:0,15,146	0/0:12,0:6:9:0,9,83	0/0:14,0:12:14.84:0,15,113	0/0:13,0:13:23.84:0,24,210	0/0:15,1:17:13.98:0,14,284	0/0:5,0:5:15.01:0,15,140	0/0:13,0:28:46.93:0,47,240	0/0:7,0:7:15.01:0,15,140	0/0:10,0:10:24.04:0,24,234	0/0:7,0:7:6.01:0,6,58	0/0:6,0:6:9.01:0,9,85	0/0:7,0:7:15.02:0,15,146	0/0:4,0:4:6.01:0,6,58	0/0:6,0:6:6.01:0,6,58	0/0:5,0:5:6.01:0,6,58	0/0:23,0:25:47.88:0,48,443	1/1:4,20:24:47.68:346,48,0	0/0:21,1:21:17.06:0,17,301	0/0:7,0:7:9.01:0,9,88	0/0:3,0:3:6:0,6,53	0/0:3,0:3:0:0,0,0	0/0:3,0:3:5.99:0,6,47	0/0:6,0:6:9.01:0,9,88	0/0:14,0:14:27.04:0,27,263	0/0:11,0:12:32.89:0,33,306	0/0:8,0:7:18.03:0,18,175	0/0:11,0:11:24.03:0,24,228
chr10	65503454	.	T	TTTA	6811.73	PASS	AB=0.583;AC=39;AF=0.696;AN=56;BaseQRankSum=2.473;DP=296;FS=10.834;HRun=0;HaplotypeScore=64.3230;InbreedingCoeff=0.7589;MQ=70.52;MQ0=4;MQRankSum=-8.430;QD=44.23;ReadPosRankSum=-1.447;VQSLOD=4.9983;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,8:11:27.06:512,27,0	1/1:2,4:6:15.03:277,15,0	0/0:34,0:17:25.81:0,26,271	0/0:41,0:15:7.17:0,7,333	0/0:23,0:23:52.42:0,52,853	1/1:6,11:16:43.37:800,43,0	1/1:0,3:3:9.03:189,9,0	1/1:4,22:25:68.93:1263,69,0	1/1:1,1:1:3.01:62,3,0	0/0:9,0:9:27.09:0,27,437	0/0:12,0:12:36.12:0,36,595	1/1:0,1:1:3:26,3,0	0/0:7,0:7:21.06:0,21,333	1/1:2,0:2:6.01:88,6,0	1/1:1,1:2:6.01:89,6,0	1/1:0,1:1:3.01:63,3,0	1/1:8,10:18:34.31:669,34,0	1/1:6,8:14:30.71:596,31,0	1/1:3,4:7:14.99:199,15,0	1/1:1,4:5:15.05:301,15,0	1/1:1,2:3:9.02:152,9,0	1/1:0,2:2:6.02:109,6,0	0/0:5,0:5:11.71:0,12,204	0/0:10,0:10:27.01:0,27,369	1/1:0,8:8:15.05:314,15,0	0/1:2,5:7:5.73:320,0,6	1/1:4,4:8:21.03:291,21,0	1/1:1,9:10:24.08:491,24,0
chr10	65503467	.	GT	G	2217.38	PASS	AB=0.786;AC=38;AF=0.679;AN=56;BaseQRankSum=7.663;DP=312;FS=14.178;HRun=9;HaplotypeScore=66.6310;InbreedingCoeff=0.6989;MQ=63.69;MQ0=13;MQRankSum=-8.516;QD=12.74;ReadPosRankSum=0.598;VQSLOD=1.6519;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,7:12:4.58:99,5,0	1/1:1,5:6:15.01:135,15,0	0/0:42,0:16:13.22:0,13,123	0/1:42,0:13:8.72:9,0,90	0/0:24,0:25:68.99:0,69,747	1/1:3,16:18:19.88:413,20,0	1/1:2,3:5:11.04:88,11,0	0/0:23,0:21:54.15:0,54,612	1/1:0,3:2:6:54,6,0	0/0:10,0:10:30.06:0,30,333	0/0:16,0:15:42.12:0,42,481	1/1:0,3:2:6:54,6,0	0/0:8,0:8:24:0,24,240	1/1:0,2:2:6:54,6,0	1/1:1,5:6:15:133,15,0	1/1:0,1:1:3:27,3,0	1/1:4,11:15:32.60:278,33,0	1/1:7,8:15:27:248,27,0	1/1:0,2:2:6:55,6,0	1/1:1,5:5:15.01:134,15,0	1/1:2,3:4:6:54,6,0	0/1:1,3:3:23.39:44,0,23	0/0:6,0:6:18.05:0,18,207	0/0:8,0:8:18.05:0,18,205	1/1:2,5:7:12:108,12,0	1/1:0,5:5:15.01:134,15,0	1/1:0,7:7:18.01:161,18,0	1/1:1,6:7:15:136,15,0
chr10	65503477	.	CT	C	634.98	PASS	AB=0.714;AC=29;AF=0.518;AN=56;BaseQRankSum=4.650;DP=333;FS=2.852;HRun=15;HaplotypeScore=67.5578;InbreedingCoeff=0.6249;MQ=57.65;MQ0=13;MQRankSum=-5.828;QD=5.08;ReadPosRankSum=2.582;VQSLOD=2.3455;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,8:12:18.44:101,18,0	1/1:1,3:6:12.90:69,13,0	0/0:40,0:14:3.11:0,3,9	0/0:41,0:12:7.43:0,7,31	0/0:23,2:26:25.30:0,25,296	1/1:14,6:19:2.04:103,2,0	1/1:0,3:4:10.90:63,11,0	0/0:20,0:20:14.74:0,15,100	0/0:3,0:2:2.98:0,3,21	0/0:14,0:14:32.86:0,33,273	0/0:15,0:15:3.48:0,3,160	1/1:3,2:4:5.91:38,6,0	0/0:8,0:9:5.13:0,5,61	1/1:2,1:3:5.89:38,6,0	1/1:5,3:8:5.81:38,6,0	0/0:1,2:3:0:0,0,0	1/1:9,4:18:22.40:122,22,0	0/0:16,0:16:19.77:0,20,104	1/1:3,1:3:2.92:19,3,0	1/1:6,2:7:2.81:19,3,0	0/0:4,0:3:2.98:0,3,22	0/1:3,2:4:0.20:17,0,0	0/0:5,1:6:9:0,9,79	0/0:7,0:7:17.96:0,18,146	1/1:3,3:7:11.82:76,12,0	1/1:5,2:7:2.83:19,3,0	1/1:4,2:7:5.80:38,6,0	1/1:7,2:8:8.86:57,9,0
chr10	65503597	.	ATGTG	A	7173.35	PASS	AB=0.771;AC=39;AF=0.722;AN=54;BaseQRankSum=4.904;DP=542;FS=2.543;HRun=0;HaplotypeScore=93.6558;InbreedingCoeff=0.5476;MQ=53.67;MQ0=18;MQRankSum=1.468;QD=20.50;ReadPosRankSum=0.983;VQSLOD=4.5476;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,24:33:59.92:973,60,0	1/1:3,3:6:6.02:97,6,0	0/0:42,0:12:3.01:0,3,37	0/0:36,0:4:4.26:0,4,41	0/0:14,0:15:32.85:0,33,632	1/1:3,16:20:23.50:523,24,0	1/1:9,11:20:17.98:292,18,0	0/0:30,0:31:41.87:0,42,786	1/1:2,10:13:24.08:368,24,0	0/1:8,1:16:20.36:20,0,168	0/1:5,0:11:24.72:25,0,26	1/1:4,5:9:12.04:195,12,0	0/1:14,0:13:18.14:18,0,603	1/1:4,10:14:27.09:438,27,0	1/1:2,3:5:3.01:49,3,0	1/1:1,11:12:27.09:438,27,0	1/1:13,29:42:72.25:1167,72,0	1/1:7,13:20:39.13:612,39,0	1/1:19,4:21:2.37:137,2,0	1/1:4,4:9:9.03:146,9,0	1/1:13,19:31:45.15:730,45,0	1/1:4,2:7:6.02:97,6,0	0/0:14,0:13:18.06:0,18,401	0/0:44,2:49:15.93:0,16,2115	1/1:1,8:9:15.05:244,15,0	1/1:9,9:20:23.48:481,23,0	1/1:5,5:12:9.02:125,9,0	./.
chr10	65504813	.	TGC	T	15863.10	PASS	AB=0.535;AC=37;AF=0.661;AN=56;BaseQRankSum=14.251;DP=683;FS=6.583;HRun=0;HaplotypeScore=84.4392;InbreedingCoeff=0.9189;MQ=66.43;MQ0=6;MQRankSum=-0.262;QD=35.41;ReadPosRankSum=5.548;VQSLOD=7.2799;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,59:57:99:1695,111,0	1/1:0,11:11:33.11:504,33,0	0/0:20,1:14:26.19:0,26,426	0/0:29,0:20:18.91:0,19,504	0/0:27,0:27:81.22:0,81,1464	1/1:0,14:14:33.11:494,33,0	1/1:0,22:22:51.17:779,51,0	0/0:29,0:29:81.10:0,81,1395	1/1:2,21:23:57.19:871,57,0	0/0:27,0:27:81.10:0,81,1474	0/0:18,0:18:51.17:0,51,981	1/1:0,17:17:48.16:734,48,0	0/0:19,0:19:57.11:0,57,991	1/1:0,19:19:42.14:641,42,0	1/1:0,19:19:54.18:825,54,0	1/1:0,14:14:33.11:504,33,0	1/1:0,30:30:60.14:916,60,0	1/1:0,36:35:81.28:1238,81,0	1/1:0,14:13:39.04:526,39,0	1/1:1,16:17:39.13:596,39,0	1/1:1,44:45:99:1554,102,0	1/1:1,22:23:51.17:780,51,0	0/0:19,0:19:56.94:0,57,951	0/0:44,0:44:99:0,132,2447	1/1:0,14:14:33.11:505,33,0	0/1:3,20:22:99:742,0,110	1/1:1,31:32:81.27:1225,81,0	1/1:0,16:16:48.16:733,48,0
chr10	65505141	.	CAAAT	C	2146.44	PASS	AC=30;AF=0.652;AN=46;BaseQRankSum=5.920;DP=327;FS=0.902;HRun=0;HaplotypeScore=52.1826;InbreedingCoeff=0.6019;MQ=61.69;MQ0=4;MQRankSum=2.348;QD=12.20;ReadPosRankSum=2.348;VQSLOD=1.9533;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,10:24:30.10:443,30,0	1/1:4,1:5:3.01:46,3,0	./.	./.	0/0:15,0:15:12.04:0,12,280	1/1:12,7:19:21.07:314,21,0	1/1:1,1:2:3.01:46,3,0	0/0:44,0:43:17.97:0,18,185	0/0:8,0:8:9.03:0,9,190	0/0:12,0:12:9.03:0,9,210	0/0:8,0:8:3.01:0,3,70	1/1:5,0:5:3.01:45,3,0	./.	1/1:5,2:7:6.02:92,6,0	1/1:8,1:9:3.01:46,3,0	1/1:8,4:13:12.03:166,12,0	1/1:11,16:27:2.35:474,2,0	0/0:16,0:16:10.27:0,10,127	1/1:14,1:15:3.01:46,3,0	0/0:4,0:4:6.02:0,6,140	1/1:7,2:9:6.02:92,6,0	1/1:10,1:11:3.01:46,3,0	0/0:9,0:9:6.02:0,6,140	./.	1/1:6,5:11:12.04:172,12,0	1/1:4,5:9:15.05:231,15,0	1/1:7,3:10:3:46,3,0	./.
chr10	65506154	.	A	AT	883.32	PASS	AB=0.933;AC=3;AF=0.054;AN=56;BaseQRankSum=-7.256;DP=522;FS=2.379;HRun=8;HaplotypeScore=53.2660;InbreedingCoeff=0.5867;MQ=69.85;MQ0=0;MQRankSum=-0.491;QD=18.79;ReadPosRankSum=-4.164;VQSLOD=2.4484;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:87.04:0,87,796	0/0:4,0:4:12.01:0,12,110	0/0:16,0:11:7.99:0,8,94	0/1:13,1:11:19.84:20,0,116	0/0:20,0:20:50.99:0,51,454	0/0:21,0:21:63.03:0,63,577	0/0:19,0:19:51.02:0,51,467	1/1:5,28:33:84.25:969,84,0	0/0:10,0:10:21.01:0,21,192	0/0:18,0:18:36.01:0,36,329	0/0:18,0:18:51.03:0,51,467	0/0:9,0:9:24.01:0,24,220	0/0:7,0:7:18.01:0,18,165	0/0:15,0:15:42:0,42,379	0/0:12,0:12:33:0,33,297	0/0:17,0:17:47.99:0,48,432	0/0:23,0:23:54.02:0,54,494	0/0:18,0:18:51.03:0,51,466	0/0:30,0:30:65.95:0,66,587	0/0:25,0:25:72.02:0,72,654	0/0:16,0:15:39.01:0,39,354	0/0:16,0:16:36.01:0,36,329	0/0:20,0:20:57.01:0,57,516	0/0:4,0:4:12.01:0,12,110	0/0:25,0:25:72.01:0,72,649	0/0:30,0:30:80.93:0,81,741	0/0:31,0:31:80.97:0,81,725	0/0:18,0:18:36.90:0,37,353
chr10	65506274	.	GC	G	7436.02	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=9.815;DP=423;FS=5.295;HRun=7;HaplotypeScore=63.2593;InbreedingCoeff=0.9821;MQ=74.80;MQ0=1;MQRankSum=-1.802;QD=25.73;ReadPosRankSum=2.051;VQSLOD=5.6626;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,12:14:31.31:309,31,0	1/1:1,6:7:21.05:214,21,0	0/0:19,0:18:39.12:0,39,479	0/0:15,0:11:14.60:0,15,260	0/0:18,0:18:51.16:0,51,640	1/1:1,13:14:39.09:398,39,0	1/1:1,13:14:19.33:375,19,0	0/0:21,0:21:51.14:0,51,608	1/1:1,8:9:18.04:184,18,0	1/1:0,14:14:39.09:398,39,0	1/1:3,20:23:54.12:550,54,0	1/1:0,5:5:8.89:92,9,0	0/0:8,0:8:24.08:0,24,300	1/1:1,15:16:42.09:428,42,0	1/1:1,12:13:36.08:367,36,0	1/1:1,9:10:21.05:214,21,0	1/1:1,23:24:63.14:641,63,0	0/0:14,0:14:33.11:0,33,415	1/1:1,10:11:33.06:330,33,0	1/1:5,17:22:42.08:428,42,0	1/1:0,12:12:33.07:337,33,0	1/1:1,21:22:57.13:581,57,0	0/0:23,0:23:43.55:0,44,631	0/0:16,0:16:48.11:0,48,586	1/1:1,15:16:48.11:488,48,0	1/1:0,20:20:57.12:581,57,0	1/1:2,12:14:30.06:306,30,0	1/1:2,7:8:21.05:214,21,0
chr10	65506281	.	CA	C	1019.26	PASS	AB=0.980;AC=31;AF=0.554;AN=56;BaseQRankSum=14.233;DP=431;FS=3.371;HRun=1;HaplotypeScore=87.6790;InbreedingCoeff=0.3328;MQ=79.43;MQ0=1;MQRankSum=-1.957;QD=3.42;ReadPosRankSum=6.087;VQSLOD=0.3433;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:19,0:19:45.52:46,0,91	0/1:7,1:8:4.06:66,0,4	0/0:21,0:21:49.90:0,50,631	0/0:13,0:11:32.02:0,32,368	0/0:19,0:19:57.14:0,57,769	1/1:13,0:13:27.03:76,27,0	0/1:15,0:15:15.72:47,0,16	0/0:22,0:22:63.18:0,63,839	1/1:8,0:8:12.22:34,12,0	0/1:15,0:15:10.22:12,0,10	0/1:22,0:22:4.90:64,0,5	0/1:7,0:7:21.34:21,0,36	0/0:8,0:8:24.08:0,24,351	1/1:16,0:16:9.76:80,10,0	0/1:14,0:14:15.53:44,0,16	0/1:12,0:12:16.86:17,0,51	1/1:23,0:23:47.04:150,47,0	0/0:13,0:13:36.10:0,36,505	0/1:13,1:14:41.35:41,0,57	1/1:18,1:18:8.33:81,8,0	1/1:13,0:13:22.37:63,22,0	1/1:21,0:21:40.69:129,41,0	0/0:20,0:20:49.27:0,49,779	0/0:17,0:17:51.16:0,51,717	1/1:16,1:17:10.27:86,10,0	1/1:21,0:21:9.34:69,9,0	1/1:13,0:13:0.12:36,0,0	1/1:8,0:7:16.12:51,16,0
chr10	65506401	.	C	CAAAT	25137.02	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-14.375;DP=623;FS=9.411;HRun=0;HaplotypeScore=80.5689;InbreedingCoeff=0.9984;MQ=68.74;MQ0=4;MQRankSum=-4.229;QD=56.49;ReadPosRankSum=5.418;VQSLOD=6.0908;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,24:28:56.79:1388,57,0	1/1:2,9:12:20.90:552,21,0	0/0:27,0:26:66.19:0,66,1084	0/0:10,0:10:27.07:0,27,449	0/0:32,0:32:93.14:0,93,1569	1/1:1,9:10:24.08:642,24,0	1/1:0,15:15:42.14:1121,42,0	0/0:20,0:19:51.13:0,51,788	1/1:1,18:21:42.14:1101,42,0	1/1:2,23:27:72.19:1673,72,0	1/1:2,24:27:69.06:1641,69,0	1/1:1,19:19:45.15:1202,45,0	0/0:26,0:26:78.21:0,78,1362	1/1:0,23:21:42.14:1122,42,0	1/1:3,28:32:66.23:1702,66,0	1/1:1,19:21:48.16:1282,48,0	1/1:5,14:18:51.06:1231,51,0	0/0:20,0:20:51.08:0,51,844	1/1:2,15:20:54.07:1022,54,0	1/1:2,18:19:48.09:1104,48,0	1/1:4,15:20:31.66:796,32,0	1/1:1,16:18:42.14:1078,42,0	0/0:20,0:20:57.17:0,57,1018	0/0:23,0:23:54.14:0,54,925	1/1:0,24:24:45.15:1194,45,0	1/1:0,26:26:78.23:1929,78,0	1/1:0,49:46:99:2716,102,0	1/1:0,10:10:24.08:641,24,0
chr10	65508424	.	AT	A	7274.05	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=4.356;DP=485;FS=15.507;HRun=9;HaplotypeScore=116.3788;InbreedingCoeff=0.9409;MQ=73.30;MQ0=4;MQRankSum=-5.337;QD=20.38;ReadPosRankSum=0.542;VQSLOD=3.6964;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,23:24:62.41:502,62,0	1/1:1,6:7:17.97:157,18,0	0/0:31,1:25:31.97:0,32,531	0/0:26,0:19:26.53:0,27,307	0/0:19,0:19:39.04:0,39,423	1/1:3,17:19:47.59:378,48,0	1/1:0,14:13:35.63:268,36,0	1/1:4,25:28:65.97:589,66,0	1/1:2,8:10:23.87:197,24,0	1/1:0,12:12:35.99:321,36,0	1/1:1,8:9:17.91:148,18,0	1/1:1,13:14:32.95:287,33,0	0/0:18,0:18:51.09:0,51,553	1/1:1,11:12:29.82:244,30,0	1/1:4,22:26:52.79:433,53,0	1/1:2,13:15:39.02:357,39,0	1/1:0,20:20:50.88:442,51,0	1/1:1,12:13:1.44:267,1,0	1/1:4,19:22:54.02:494,54,0	1/1:6,17:23:50.38:395,50,0	1/1:0,14:14:41.71:341,42,0	1/1:1,21:22:62.71:527,63,0	0/0:12,0:12:30.09:0,30,346	0/0:21,0:21:60.18:0,60,692	1/1:1,15:16:35.69:301,36,0	1/1:3,13:16:36:325,36,0	1/1:4,8:12:24:219,24,0	1/1:3,3:6:9:82,9,0
chr10	65508476	.	GCA	G	4535.67	PASS	AB=0.846;AC=40;AF=0.769;AN=52;BaseQRankSum=10.023;DP=444;FS=3.879;HRun=0;HaplotypeScore=146.0066;InbreedingCoeff=0.4504;MQ=40.49;MQ0=34;MQRankSum=-3.635;QD=12.70;ReadPosRankSum=-2.629;VQSLOD=4.3836;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,9:21:23.97:313,24,0	1/1:7,4:9:3.95:40,4,0	./.	./.	0/0:26,0:26:33.08:0,33,463	1/1:9,9:16:8.65:93,9,0	1/1:11,3:10:11.99:156,12,0	0/0:28,0:19:48.02:0,48,747	0/1:8,6:12:14.40:88,0,14	1/1:5,10:12:32.96:396,33,0	1/1:5,9:13:2.84:33,3,0	1/1:4,7:10:15.05:201,15,0	0/0:18,0:18:45.04:0,45,742	1/1:2,9:10:11.86:121,12,0	1/1:2,15:17:9.02:107,9,0	1/1:5,6:11:21.53:283,22,0	1/1:10,14:21:40.31:457,40,0	0/1:11,3:12:63.07:63,0,90	0/1:13,2:11:18.72:290,0,19	1/1:10,14:23:20.72:256,21,0	1/1:12,4:12:5.69:56,6,0	1/1:4,7:11:9.03:130,9,0	0/0:15,0:15:29.93:0,30,430	0/1:42,1:43:24.19:24,0,1440	1/1:11,6:16:24.08:338,24,0	1/1:13,10:22:63.16:809,63,0	1/1:2,7:7:21.07:280,21,0	1/1:1,0:1:1.25:3,1,0
chr10	65508484	.	GCA	G	1718.55	PASS	AB=0.732;AC=21;AF=0.420;AN=50;BaseQRankSum=8.868;DP=453;FS=2.449;HRun=0;HaplotypeScore=142.4560;InbreedingCoeff=-0.1619;MQ=40.70;MQ0=33;MQRankSum=-7.607;QD=6.14;ReadPosRankSum=-0.642;VQSLOD=3.4504;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:18,6:22:86.93:87,0,152	1/1:3,6:8:3.95:39,4,0	./.	./.	0/0:25,0:25:42.12:0,42,808	0/1:9,8:14:35.64:36,0,53	0/0:10,0:6:7.48:0,7,32	0/0:29,0:20:30.45:0,30,925	0/1:7,9:14:47.70:64,0,48	1/1:7,9:13:35.80:400,36,0	1/1:7,8:14:5.84:59,6,0	0/1:4,8:11:14.03:125,0,14	0/0:20,0:20:50.32:0,50,827	1/1:2,10:11:3.63:67,4,0	0/1:6,9:15:15.22:29,0,15	0/1:9,5:14:56.88:81,0,57	0/1:15,8:21:99:220,0,165	0/1:12,2:11:9.76:10,0,247	0/1:19,1:15:26.79:27,0,145	0/1:14,8:21:36.85:37,0,156	0/0:16,2:14:8.98:0,9,103	0/0:6,4:10:6.40:0,6,77	0/0:16,0:16:30.10:0,30,596	0/0:42,0:42:55.64:0,56,1768	0/1:7,8:15:26.14:70,0,26	0/1:14,12:24:61.59:432,0,62	0/1:6,2:7:36.77:94,0,37	./.
chr10	65508485	.	CAT	C	581.71	PASS	AB=0.987;AC=17;AF=0.340;AN=50;BaseQRankSum=9.369;DP=456;FS=9.005;HRun=0;HaplotypeScore=147.1676;InbreedingCoeff=-0.0224;MQ=40.78;MQ0=33;MQRankSum=-8.085;QD=2.57;ReadPosRankSum=0.421;VQSLOD=2.2420;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:22:48.48:48,0,202	1/1:8,0:7:2.96:19,3,0	./.	./.	0/0:25,0:25:42.11:0,42,749	0/1:18,0:15:8.75:9,0,76	0/0:10,0:6:4.87:0,5,43	0/0:29,0:20:54.07:0,54,980	0/1:17,0:15:15.28:15,0,57	1/1:14,2:13:27.65:184,28,0	1/1:10,5:14:5.72:39,6,0	0/1:12,0:11:49.05:49,0,60	0/0:21,0:21:52.18:0,52,757	0/1:12,0:11:0.78:16,0,1	0/1:16,0:16:7.80:8,0,56	0/1:14,0:14:23.99:24,0,98	0/1:24,0:21:90.65:91,0,227	0/0:13,0:11:12.06:0,12,198	0/0:20,0:15:13.36:0,13,282	0/0:22,0:21:4.27:0,4,250	0/0:18,0:14:9.03:0,9,154	0/0:10,0:10:9.01:0,9,125	0/0:17,0:17:33.11:0,33,649	0/0:41,0:41:77.55:0,78,1787	0/1:16,0:15:13.53:14,0,95	0/1:25,1:24:99:183,0,166	0/1:7,1:7:37.13:37,0,74	./.
chr10	65508490	.	GTGTA	G	1237.28	PASS	AB=0.990;AC=27;AF=0.500;AN=54;BaseQRankSum=10.391;DP=501;FS=7.177;HRun=0;HaplotypeScore=158.3282;InbreedingCoeff=-0.0910;MQ=42.56;MQ0=35;MQRankSum=-4.868;QD=3.56;ReadPosRankSum=1.450;VQSLOD=2.0528;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:24:54.17:54,0,62	0/1:10,0:9:10.40:10,0,23	1/1:2,0:1:2.80:13,3,0	0/0:7,0:2:5.97:0,6,57	0/0:27,0:26:42.14:0,42,1010	0/1:21,0:18:24.11:24,0,82	1/1:11,0:7:8.29:39,8,0	0/0:32,1:24:17.04:0,17,511	0/1:14,2:15:1.77:73,0,2	1/1:17,0:14:33.35:317,33,0	1/1:15,0:14:5.75:63,6,0	0/1:13,0:12:28.77:31,0,29	0/0:21,0:21:24.70:0,25,714	1/1:13,0:12:9.14:54,9,0	0/1:17,0:17:9.03:9,0,34	0/1:14,0:14:26.68:53,0,27	0/1:28,0:25:81.94:82,0,137	0/1:15,0:12:77.08:112,0,77	0/1:21,0:15:54.64:84,0,55	0/1:24,0:23:1.52:2,0,85	0/1:20,0:16:15.07:15,0,42	0/1:10,0:10:4.29:4,0,33	0/0:18,0:18:35.69:0,36,789	0/0:46,0:45:54.58:0,55,2161	1/1:16,1:16:17.25:72,17,0	0/1:29,0:27:29.86:189,0,30	0/1:8,0:7:32.92:106,0,33	./.
chr10	65508492	.	GTA	G	1697.74	PASS	AB=0.948;AC=27;AF=0.482;AN=56;BaseQRankSum=5.497;DP=510;FS=2.828;HRun=0;HaplotypeScore=146.8266;InbreedingCoeff=-0.1088;MQ=42.93;MQ0=34;MQRankSum=-4.474;QD=4.89;ReadPosRankSum=-3.947;VQSLOD=1.6144;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:24,2:24:59.97:158,0,60	1/1:9,1:9:5.90:43,6,0	1/1:3,0:2:5.29:22,5,0	0/0:8,0:3:8.97:0,9,85	0/0:26,0:25:26.43:0,26,690	0/1:18,3:18:24.15:53,0,24	0/1:9,2:8:3.56:104,0,4	0/0:33,0:24:27.73:0,28,494	0/1:17,0:15:3.84:49,0,4	1/1:15,2:14:30.27:223,30,0	1/1:10,5:14:5.71:37,6,0	0/1:14,0:13:24.09:24,0,26	0/0:20,1:21:8.98:0,9,468	1/1:12,1:12:12.27:109,12,0	0/1:18,0:18:25.12:25,0,41	0/1:14,1:15:21.64:73,0,22	0/1:26,2:25:85.87:169,0,86	0/1:16,0:13:38.84:101,0,39	0/1:19,2:15:60.01:120,0,60	0/1:25,1:24:4.55:5,0,89	0/1:19,0:16:29.52:30,0,33	0/0:10,0:10:8.80:0,9,54	0/0:18,0:18:25.85:0,26,534	0/0:47,0:46:53.37:0,53,1522	0/1:18,0:17:19.58:101,0,20	0/1:27,2:27:33.64:313,0,34	0/1:7,1:7:25.43:92,0,25	1/1:2,0:2:2.98:22,3,0
chr10	65508494	.	A	ATG	355.99	PASS	AB=1.000;AC=16;AF=0.286;AN=56;BaseQRankSum=-1.183;DP=495;FS=3.694;HRun=0;HaplotypeScore=143.4428;InbreedingCoeff=0.2479;MQ=45.06;MQ0=34;MQRankSum=-2.005;QD=2.21;ReadPosRankSum=-4.513;VQSLOD=0.9212;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:22:21.76:0,22,129	1/1:9,0:8:0.47:1,0,0	0/0:3,0:2:4.55:0,5,29	0/0:11,0:6:11.58:0,12,92	0/0:27,0:26:39.53:0,40,430	0/0:18,0:15:3.98:0,4,24	0/1:11,0:8:13.44:13,0,32	1/1:28,4:24:18.04:229,18,0	1/1:16,0:14:6.02:85,6,0	0/1:16,0:13:2.04:22,0,2	1/1:15,0:14:2.98:24,3,0	0/0:12,0:11:5.76:0,6,43	0/0:22,0:22:27.01:0,27,293	0/0:12,0:11:2.10:0,2,10	0/0:17,0:17:3.39:0,3,23	0/0:14,0:14:11.42:0,11,75	0/0:27,0:24:6.37:0,6,138	0/1:15,0:12:25.67:81,0,26	0/0:22,0:15:24.37:0,24,159	0/0:23,0:21:17.84:0,18,131	0/1:21,0:17:10.56:11,0,52	0/0:9,0:9:8.95:0,9,65	0/0:18,0:18:26.75:0,27,285	0/0:48,0:47:80.91:0,81,904	0/1:16,0:15:3.48:3,0,87	0/0:27,0:25:4.49:0,4,156	0/1:8,0:7:30.12:30,0,46	1/1:2,0:2:0.47:1,0,0
chr10	65508935	.	A	AG	17237.80	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-3.246;DP=658;FS=5.093;HRun=1;HaplotypeScore=76.6379;InbreedingCoeff=0.9747;MQ=78.03;MQ0=0;MQRankSum=-3.879;QD=39.72;ReadPosRankSum=4.764;VQSLOD=5.4483;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,48:48:99:1908,129,0	1/1:0,9:9:24.08:360,24,0	0/0:20,0:20:57.04:0,57,692	0/0:21,0:22:58.99:0,59,710	0/0:16,0:16:45.15:0,45,581	1/1:1,26:27:69.23:1034,69,0	1/1:1,24:25:63.21:944,63,0	0/0:29,0:29:87.26:0,87,1095	1/1:2,24:26:63.21:944,63,0	0/0:23,0:23:66.21:0,66,857	0/0:23,0:23:66.20:0,66,843	1/1:0,25:25:72.24:1079,72,0	0/0:30,0:30:87.25:0,87,1099	1/1:0,18:18:54.18:809,54,0	1/1:1,21:22:51.17:765,51,0	1/1:0,25:25:63.21:944,63,0	1/1:1,14:15:39.13:585,39,0	0/0:24,0:24:69.20:0,69,876	1/1:2,22:24:66.20:965,66,0	1/1:1,17:18:51.17:764,51,0	1/1:1,30:31:75.25:1124,75,0	1/1:2,28:30:81.27:1201,81,0	0/0:17,0:17:48.14:0,48,609	0/0:20,0:20:60.19:0,60,778	1/1:0,15:15:45.15:674,45,0	1/1:3,25:28:3.36:1023,3,0	1/1:1,40:41:99:1798,120,0	1/1:0,7:7:21.07:315,21,0
chr10	65509887	.	CAAT	C	5352.35	PASS	AB=0.946;AC=40;AF=0.714;AN=56;BaseQRankSum=8.397;DP=449;FS=2.566;HRun=0;HaplotypeScore=76.8753;InbreedingCoeff=0.4143;MQ=62.16;MQ0=1;MQRankSum=1.996;QD=15.12;ReadPosRankSum=6.762;VQSLOD=3.9406;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:13,31:44:1.28:742,1,0	1/1:2,3:5:6.02:83,6,0	0/0:4,0:2:3.01:0,3,41	0/0:12,0:9:13.33:0,13,175	0/0:18,0:18:36.11:0,36,612	1/1:3,18:21:30.10:421,30,0	1/1:6,8:14:12.04:169,12,0	0/0:31,0:31:51.13:0,51,804	1/1:7,10:17:15.05:211,15,0	0/1:25,2:27:99:116,0,395	0/1:12,1:12:48:48,0,202	1/1:5,14:19:27.09:379,27,0	0/1:11,1:12:15.07:15,0,421	1/1:4,7:11:3.01:34,3,0	1/1:4,14:18:30.10:422,30,0	1/1:5,5:10:9.03:127,9,0	1/1:7,19:26:39.13:548,39,0	0/0:25,0:25:7.23:0,7,33	1/1:4,6:10:17.98:210,18,0	1/1:3,5:8:11.99:140,12,0	1/1:4,4:8:6.02:84,6,0	1/1:5,4:9:1.29:39,1,0	0/0:4,0:4:3.01:0,3,49	0/1:13,0:13:13.91:14,0,258	1/1:7,10:17:18.06:246,18,0	1/1:6,26:33:47.07:1011,47,0	1/1:8,10:18:18.06:253,18,0	1/1:0,1:1:3.01:42,3,0
chr10	65510150	.	AATTTTATTTT	A	539.37	PASS	AC=6;AF=0.111;AN=54;BaseQRankSum=4.611;DP=366;FS=3.963;HRun=0;HaplotypeScore=107.8182;InbreedingCoeff=0.7290;MQ=78.28;MQ0=2;MQRankSum=-2.017;QD=12.54;ReadPosRankSum=0.125;VQSLOD=1.8743;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:39.13:0,39,1857	0/0:3,0:3:6.02:0,6,249	0/0:15,0:11:9.91:0,10,292	0/0:19,0:14:19.13:0,19,212	0/0:13,0:13:27.09:0,27,1049	0/0:18,0:18:48.16:0,48,2068	0/0:13,0:13:24.08:0,24,964	0/0:37,0:35:48.15:0,48,1739	0/0:9,0:9:9.03:0,9,450	1/1:3,7:10:15.02:322,15,0	1/1:8,0:8:6:52,6,0	0/0:6,0:6:9.03:0,9,394	0/0:9,0:9:15.03:0,15,550	0/0:7,0:7:12.04:0,12,600	0/0:11,0:11:6.02:0,6,300	0/0:9,0:9:15.05:0,15,584	0/0:26,0:26:44.68:0,45,2677	1/1:9,16:25:12:292,12,0	0/0:20,0:20:33.11:0,33,1437	0/0:8,0:8:12.04:0,12,529	0/0:13,0:13:24.08:0,24,1123	./.	0/0:4,0:4:3.01:0,3,119	0/0:4,0:4:9.03:0,9,450	0/0:9,0:9:18.06:0,18,648	0/0:15,0:15:36.11:0,36,1399	0/0:13,0:13:27.08:0,27,1134	0/0:22,0:22:36.12:0,36,1662
chr10	65510598	.	C	CCCCCA	505.95	PASS	AB=1.000;AC=8;AF=0.143;AN=56;BaseQRankSum=-3.013;DP=536;FS=0.000;HRun=0;HaplotypeScore=146.7745;InbreedingCoeff=0.1466;MQ=92.46;MQ0=0;MQRankSum=-4.730;QD=5.01;ReadPosRankSum=-6.043;VQSLOD=0.2789;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:17,0:17:8.95:9,0,342	0/1:8,0:8:42.82:43,0,166	0/0:23,0:23:60.18:0,60,1143	0/0:23,0:23:51.39:0,51,805	0/0:10,0:10:15.05:0,15,311	0/1:6,0:6:4.89:5,0,156	0/0:33,0:33:24.34:0,24,960	0/0:19,0:19:51.15:0,51,992	0/0:41,0:41:43.46:0,43,1206	0/0:14,0:14:32.53:0,33,374	0/0:10,0:10:10.86:0,11,138	0/1:25,0:25:3.79:4,0,682	0/0:25,0:25:75.17:0,75,1357	0/0:26,0:26:49.23:0,49,815	0/0:30,0:30:58.26:0,58,906	0/0:31,0:31:93.24:0,93,1065	0/0:35,0:35:67.32:0,67,1050	1/1:4,5:10:29.97:522,30,0	0/0:13,0:13:14.07:0,14,365	0/0:6,0:6:18.03:0,18,206	0/1:29,0:29:42.69:43,0,556	0/1:6,0:6:12.83:13,0,83	0/0:8,0:8:18.06:0,18,373	0/0:34,0:34:96.27:0,96,1952	0/0:4,0:4:9.03:0,9,111	0/0:11,0:11:16.85:0,17,190	0/0:30,0:30:50.20:0,50,878	0/0:9,0:9:27.04:0,27,299
chr10	65510601	.	C	CGA	124.94	PASS	AB=0.667;AC=1;AF=0.018;AN=56;BaseQRankSum=3.700;DP=542;FS=4.274;HRun=0;HaplotypeScore=109.3841;InbreedingCoeff=-0.0214;MQ=92.76;MQ0=0;MQRankSum=-3.770;QD=10.41;ReadPosRankSum=0.918;VQSLOD=3.4312;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:42.12:0,42,634	0/0:8,0:8:18.05:0,18,269	0/0:24,0:24:68.88:0,69,915	0/0:23,0:23:55.28:0,55,712	0/0:11,0:11:21.05:0,21,311	0/0:7,0:7:18.05:0,18,270	0/0:32,0:32:96.32:0,96,1539	0/0:19,0:19:57.14:0,57,817	0/0:41,0:41:99:0,120,1893	0/0:15,0:15:42.11:0,42,635	0/0:10,0:10:17.73:0,18,271	0/0:26,0:26:78.22:0,78,1177	0/0:27,0:27:78.20:0,78,1167	0/0:26,0:26:78.24:0,78,1226	0/0:29,0:29:84.29:0,84,1362	0/0:31,0:31:93.32:0,93,1514	0/0:35,0:35:99:0,105,1660	0/1:6,6:12:99:199,0,136	0/0:15,0:15:42.12:0,42,630	0/0:7,0:7:21.06:0,21,319	0/0:27,0:27:81.24:0,81,1235	0/0:5,0:5:12.03:0,12,174	0/0:6,0:6:18.06:0,18,294	0/0:34,0:34:99:0,102,1600	0/0:5,0:5:14.99:0,15,189	0/0:12,0:12:30.06:0,30,417	0/0:29,0:29:81.25:0,81,1256	0/0:9,0:9:27.09:0,27,432
chr10	65511337	.	GA	G	337.25	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.170;DP=730;FS=1.105;HRun=4;HaplotypeScore=70.4055;InbreedingCoeff=0.9995;MQ=90.79;MQ0=0;MQRankSum=-2.046;QD=28.10;ReadPosRankSum=3.193;VQSLOD=3.3414;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:90.30:0,90,1255	0/0:13,0:13:36.12:0,36,504	0/0:38,0:38:99:0,108,1405	0/0:26,0:26:60.19:0,60,808	0/0:19,0:19:54.18:0,54,755	0/0:16,0:16:48.16:0,48,672	0/0:26,0:26:78.22:0,78,1070	0/0:28,0:28:75.25:0,75,1051	0/0:44,0:44:99:0,129,1803	0/0:35,0:35:99:0,105,1422	0/0:18,0:18:48.16:0,48,672	0/0:24,0:24:63:0,63,882	0/0:18,0:18:51.17:0,51,706	0/0:27,0:27:75.24:0,75,1035	0/0:29,0:29:87.29:0,87,1217	0/0:25,0:25:75.24:0,75,1033	0/0:35,0:35:99:0,105,1433	1/1:0,12:12:36.11:432,36,0	0/0:25,0:25:72.24:0,72,1008	0/0:24,0:24:66.22:0,66,924	0/0:54,0:54:99:0,147,2057	0/0:23,0:23:69.21:0,69,934	0/0:18,0:18:54.17:0,54,735	0/0:30,0:30:87.25:0,87,1195	0/0:18,0:18:51.17:0,51,714	0/0:27,0:27:78.25:0,78,1077	0/0:32,0:32:90.29:0,90,1240	0/0:12,0:12:33.08:0,33,441
chr10	65511926	.	T	TA	434.61	PASS	AB=0.954;AC=12;AF=0.214;AN=56;BaseQRankSum=-0.429;DP=370;FS=1.583;HRun=13;HaplotypeScore=42.8269;InbreedingCoeff=0.4240;MQ=56.25;MQ0=2;MQRankSum=2.227;QD=3.71;ReadPosRankSum=-1.345;VQSLOD=-0.6449;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:37,0:36:0.47:0,0,337	0/1:3,1:4:18.94:19,0,32	0/0:10,0:5:7.15:0,7,44	0/0:7,0:4:5.58:0,6,39	0/0:18,0:18:38.64:0,39,265	0/0:13,0:13:29.63:0,30,201	0/0:10,0:10:14.78:0,15,102	0/0:37,0:37:50.20:0,50,342	0/0:9,0:8:8.88:0,9,62	1/1:5,6:10:11.99:106,12,0	1/1:5,15:21:18.21:282,18,0	0/1:6,0:6:0:0,0,0	0/0:4,0:4:5.94:0,6,41	0/0:5,0:5:11.90:0,12,82	0/0:3,0:3:5.87:0,6,41	0/0:7,0:7:8.89:0,9,62	0/0:32,0:31:56.38:0,56,387	1/1:7,12:18:17.98:156,18,0	0/0:14,0:14:2:0,2,126	0/1:10,1:12:4.45:4,0,107	0/1:5,0:4:8.82:9,0,15	0/1:2,0:2:0:0,0,0	0/0:11,0:11:20.68:0,21,136	0/0:8,0:7:8.88:0,9,62	0/0:16,2:18:7.63:0,8,195	0/0:10,0:10:14.73:0,15,98	0/0:9,0:9:11.31:0,11,69	0/0:22,1:25:31.75:0,32,337
chr10	65512026	.	T	TA	4026.24	PASS	AB=0.923;AC=40;AF=0.741;AN=54;BaseQRankSum=3.496;DP=317;FS=4.221;HRun=0;HaplotypeScore=58.1024;InbreedingCoeff=0.6068;MQ=50.37;MQ0=17;MQRankSum=2.654;QD=15.55;ReadPosRankSum=3.826;VQSLOD=5.3628;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,14:22:17.86:343,18,0	1/1:1,4:5:10.10:102,10,0	0/0:9,0:1:3.01:0,3,32	0/0:5,0:3:7.91:0,8,54	0/0:15,0:15:44.01:0,44,388	1/1:5,7:12:24.10:227,24,0	0/1:9,2:11:59.51:79,0,60	1/1:7,30:36:77.79:825,78,0	1/1:2,3:4:12:106,12,0	1/1:12,0:12:2.61:73,3,0	0/1:7,0:7:1.57:14,0,2	1/1:0,3:3:9.01:86,9,0	0/0:12,0:12:31.63:0,32,366	1/1:4,2:4:2.57:52,3,0	1/1:9,2:11:10.88:112,11,0	1/1:3,3:6:11.45:88,11,0	1/1:6,16:25:46.12:419,46,0	1/1:9,12:19:45.11:403,45,0	1/1:13,5:13:34.25:300,34,0	1/1:2,3:5:8.99:83,9,0	1/1:2,3:5:0.21:73,0,0	./.	0/0:3,0:2:6:0,6,53	0/0:12,0:12:30.01:0,30,348	1/1:8,4:11:5.50:125,6,0	1/1:4,3:7:19.14:146,19,0	1/1:7,8:19:24.08:239,24,0	1/1:1,5:6:14.89:128,15,0
chr10	65512027	.	T	TTA	2047.01	PASS	AB=0.731;AC=23;AF=0.426;AN=54;BaseQRankSum=6.408;DP=313;FS=1.040;HRun=0;HaplotypeScore=70.3104;InbreedingCoeff=0.0242;MQ=50.06;MQ0=17;MQRankSum=1.380;QD=10.13;ReadPosRankSum=7.312;VQSLOD=2.4487;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,13:22:9.27:351,9,0	0/1:1,4:5:7.68:98,0,8	0/0:10,0:1:3.01:0,3,31	0/0:5,0:3:7.95:0,8,59	0/0:15,0:15:41.38:0,41,395	0/1:5,7:12:16.81:171,0,17	0/1:9,2:11:44.21:44,0,70	0/0:35,0:34:88.38:0,88,710	1/1:2,3:4:9.48:87,9,0	0/0:11,0:11:32.53:0,33,228	0/0:7,0:7:17.81:0,18,129	1/1:0,3:3:9.02:92,9,0	0/0:12,0:12:31.89:0,32,405	0/1:5,2:5:15.54:52,0,16	0/1:8,2:10:57:72,0,57	0/1:4,3:7:6.13:74,0,6	1/1:9,16:24:2.63:404,3,0	0/1:21,0:19:2.55:3,0,53	0/1:14,4:13:17.76:104,0,18	1/1:2,3:5:8.99:89,9,0	0/1:2,3:5:16.90:79,0,17	./.	0/0:3,0:2:6:0,6,54	0/0:11,0:11:29.57:0,30,372	0/1:8,4:11:6.73:80,0,7	0/1:4,3:7:3.01:72,0,3	0/1:12,8:18:40.29:221,0,40	0/1:1,5:6:5.85:120,0,6
chr10	65512028	.	T	TA	136.54	PASS	AB=0.947;AC=3;AF=0.056;AN=54;BaseQRankSum=2.017;DP=313;FS=4.442;HRun=0;HaplotypeScore=67.5899;InbreedingCoeff=0.3466;MQ=50.02;MQ0=17;MQRankSum=1.329;QD=3.50;ReadPosRankSum=0.745;VQSLOD=2.9341;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:22:15.72:0,16,109	0/0:5,0:5:8.64:0,9,55	0/0:10,0:1:3.01:0,3,32	0/0:5,0:3:7.64:0,8,53	0/0:15,0:15:44.75:0,45,402	0/0:12,0:12:15.14:0,15,98	0/0:11,0:11:24.45:0,24,189	0/0:34,0:33:84.11:0,84,533	0/0:5,0:4:2.81:0,3,8	0/0:11,0:11:32.79:0,33,365	0/0:7,0:7:21.01:0,21,242	0/0:3,0:3:1.83:0,2,4	0/0:12,0:12:31.89:0,32,375	0/0:7,0:5:4.37:0,4,39	0/0:11,0:11:12.20:0,12,165	0/0:7,0:7:6.17:0,6,51	0/0:25,0:24:33.98:0,34,175	1/1:10,11:19:32.62:221,33,0	0/1:17,1:13:18.25:18,0,43	0/0:5,0:5:2.76:0,3,6	0/0:5,0:5:5.20:0,5,45	./.	0/0:3,0:2:6:0,6,54	0/0:11,0:11:29.99:0,30,348	0/0:12,0:11:11.83:0,12,59	0/0:7,0:7:8.20:0,8,55	0/0:20,0:18:23.81:0,24,181	0/0:6,0:6:9.54:0,10,47
chr10	65513055	.	GACTTA	G	20118.68	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=15.313;DP=659;FS=38.862;HRun=0;HaplotypeScore=135.1192;InbreedingCoeff=0.9895;MQ=90.06;MQ0=0;MQRankSum=-11.370;QD=46.36;ReadPosRankSum=3.431;VQSLOD=3.2381;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,114,3349	1/1:1,9:10:21.07:431,21,0	0/0:32,0:32:87.23:0,87,2546	0/0:26,0:26:69.24:0,69,1978	0/0:24,0:24:66.23:0,66,1908	1/1:4,22:26:48.16:985,48,0	1/1:3,11:14:30.10:614,30,0	1/1:8,29:35:81.20:1367,81,0	1/1:1,21:22:48.16:985,48,0	1/1:4,22:26:69.21:1333,69,0	1/1:3,15:18:39.05:717,39,0	1/1:2,24:26:72.25:1469,72,0	0/0:35,0:35:99:0,99,2960	1/1:1,21:22:60.21:1230,60,0	1/1:3,28:31:75.26:1538,75,0	1/1:2,24:26:63.18:1252,63,0	1/1:1,20:20:42.62:862,43,0	0/0:19,0:19:54.15:0,54,1513	1/1:1,16:17:45.13:841,45,0	1/1:2,20:22:60.17:1190,60,0	1/1:4,19:23:42.14:862,42,0	1/1:0,13:13:33.11:667,33,0	0/0:19,0:19:48.16:0,48,1431	0/0:29,0:29:87.26:0,87,2520	1/1:5,26:31:72.25:1476,72,0	1/1:4,15:19:45.13:885,45,0	1/1:3,20:23:60.21:1231,60,0	1/1:0,7:7:9.03:185,9,0
chr10	65513131	.	G	GGTTTGTTTGTTT	32006.04	PASS	AB=0.667;AC=41;AF=0.732;AN=56;BaseQRankSum=-2.426;DP=666;FS=2.287;HRun=0;HaplotypeScore=225.6682;InbreedingCoeff=0.8786;MQ=61.86;MQ0=0;MQRankSum=-14.036;QD=68.54;ReadPosRankSum=-0.145;VQSLOD=4.2280;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:87.28:0,87,2786	1/1:7,2:9:18.02:656,18,0	0/0:35,0:32:56.77:0,57,1501	0/0:29,0:27:51.03:0,51,1357	0/0:14,0:14:24.03:0,24,508	1/1:15,6:21:30.06:1446,30,0	1/1:13,17:29:21.07:1112,21,0	1/1:18,0:31:50.45:700,50,0	1/1:23,13:35:77.99:3372,78,0	1/1:19,5:23:56.97:2033,57,0	1/1:9,3:12:20.94:644,21,0	1/1:14,5:20:39.05:1758,39,0	0/0:24,0:24:48.15:0,48,1537	1/1:22,11:32:72.03:3203,72,0	1/1:18,9:27:62.90:2297,63,0	1/1:11,5:17:36.05:1579,36,0	1/1:16,7:22:48.01:1844,48,0	0/1:12,0:24:15.45:61,0,15	1/1:21,5:26:33.02:885,33,0	1/1:12,6:18:32.98:1307,33,0	1/1:19,3:21:24.03:918,24,0	1/1:10,6:16:32.98:1273,33,0	0/0:22,0:22:36.07:0,36,924	0/0:33,0:33:69.24:0,69,2278	1/1:11,4:15:24.03:961,24,0	1/1:17,13:30:75.10:3283,75,0	1/1:20,7:28:68.83:2497,69,0	1/1:0,4:4:3.01:177,3,0
chr10	65513470	.	TGCGCGCGCGC	T	3635.44	PASS	AB=0.879;AC=25;AF=0.481;AN=52;BaseQRankSum=3.699;DP=400;FS=21.041;HRun=0;HaplotypeScore=136.8636;InbreedingCoeff=0.2853;MQ=49.15;MQ0=5;MQRankSum=-2.521;QD=16.09;ReadPosRankSum=-1.969;VQSLOD=1.1147;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:87.30:0,87,3807	1/1:1,0:1:3.01:96,3,0	./.	0/0:7,0:5:0.59:0,1,32	0/0:10,0:10:18.06:0,18,803	1/1:8,0:7:9.50:286,10,0	0/1:9,11:19:3.77:209,0,4	1/1:12,4:14:14.68:372,15,0	0/0:9,6:15:8.85:0,9,98	1/1:14,2:13:20.95:431,21,0	1/1:6,0:6:2.65:77,3,0	0/1:19,2:20:30.18:464,0,30	0/0:15,0:14:33.11:0,33,1420	0/1:18,1:18:27.75:357,0,28	0/0:6,8:14:0.47:0,0,1	0/0:5,0:6:2.60:0,3,10	0/1:23,3:27:54.31:112,0,54	0/0:3,0:6:5.36:0,5,32	0/1:10,0:10:6.65:215,0,7	0/1:7,0:7:12.21:90,0,12	0/1:31,4:35:33.21:254,0,33	1/1:6,4:11:8.99:146,9,0	0/0:14,0:14:36.12:0,36,1640	0/0:45,0:45:99:0,114,5015	1/1:6,0:5:3.48:91,3,0	1/1:9,5:14:14.96:284,15,0	1/1:6,0:6:12.04:152,12,0	./.
chr10	65513967	.	TTTA	T	1677.59	PASS	AB=1.000;AC=36;AF=0.750;AN=48;BaseQRankSum=3.669;DP=109;FS=2.118;HRun=0;HaplotypeScore=23.9869;InbreedingCoeff=0.4246;MQ=78.74;MQ0=1;MQRankSum=0.736;QD=20.46;ReadPosRankSum=0.402;VQSLOD=3.0501;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:8:18.06:0,18,367	1/1:1,2:3:6.02:86,6,0	0/1:9,0:7:0.52:1,0,78	0/1:9,0:6:2.26:17,0,2	./.	1/1:1,4:5:6.02:86,6,0	1/1:0,1:1:3.01:43,3,0	1/1:5,9:14:27.08:371,27,0	1/1:2,1:3:5.99:65,6,0	1/1:0,2:2:6.02:86,6,0	./.	1/1:0,1:1:3.01:43,3,0	0/0:1,0:1:3.01:0,3,61	1/1:0,2:2:6.02:86,6,0	1/1:0,1:1:3.01:43,3,0	1/1:0,1:1:3.01:43,3,0	1/1:4,15:19:34:477,34,0	0/0:14,0:14:29.89:0,30,559	1/1:1,2:3:6.01:69,6,0	1/1:0,1:1:3.01:43,3,0	1/1:0,2:2:6.02:87,6,0	./.	0/0:2,0:2:6.02:0,6,122	0/0:1,0:1:3.01:0,3,61	1/1:1,2:3:6.02:86,6,0	./.	1/1:0,1:1:3.01:43,3,0	1/1:0,1:1:3.01:43,3,0
chr10	65514884	.	CTTTT	C	4988.03	PASS	AB=0.798;AC=41;AF=0.732;AN=56;BaseQRankSum=8.658;DP=490;FS=3.963;HRun=18;HaplotypeScore=102.4816;InbreedingCoeff=0.6977;MQ=51.11;MQ0=21;MQRankSum=-4.719;QD=13.67;ReadPosRankSum=4.942;VQSLOD=1.2909;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:26:60.18:0,60,1012	1/1:2,4:6:15:166,15,0	0/0:26,0:10:0.87:0,1,49	0/1:16,0:8:0:0,0,0	0/0:20,0:23:51.62:0,52,786	1/1:4,9:14:17.77:205,18,0	1/1:6,5:12:13.41:120,13,0	1/1:12,5:18:18.64:207,19,0	1/1:5,5:11:4.95:47,5,0	1/1:9,8:17:23.71:293,24,0	1/1:7,12:20:20.10:232,20,0	0/1:5,6:11:48.75:127,0,49	0/0:4,0:8:14.26:0,14,161	1/1:3,4:6:11.94:146,12,0	0/1:11,4:16:0.72:159,0,1	1/1:7,9:17:32.87:358,33,0	1/1:13,14:30:13.04:417,13,0	1/1:7,1:14:8.50:22,9,0	1/1:14,11:23:16.82:380,17,0	1/1:13,12:28:53.49:592,53,0	1/1:6,4:11:11.51:126,12,0	1/1:8,12:23:41.42:453,41,0	0/0:19,0:20:51.17:0,51,922	0/0:18,0:18:24.01:0,24,337	1/1:7,6:13:11.76:132,12,0	1/1:5,13:23:46.83:511,47,0	1/1:6,7:14:22.19:238,22,0	1/1:1,1:3:5.93:59,6,0
chr10	65514899	.	TTTTG	T	1572.90	PASS	AB=0.989;AC=22;AF=0.407;AN=54;BaseQRankSum=12.747;DP=489;FS=28.397;HRun=0;HaplotypeScore=108.0196;InbreedingCoeff=-0.4667;MQ=38.87;MQ0=39;MQRankSum=-3.235;QD=4.52;ReadPosRankSum=10.207;VQSLOD=-0.6832;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:33:86.83:0,87,1333	0/1:6,1:6:3.79:79,0,4	0/1:12,0:2:2.13:2,0,34	./.	0/0:26,0:25:60.83:0,61,865	0/1:16,0:14:51.33:67,0,51	0/1:15,0:14:23.03:23,0,87	0/1:15,0:14:39.69:40,0,92	0/1:8,0:8:20.27:20,0,26	0/1:16,0:14:49.45:119,0,49	0/1:19,0:15:0.10:83,0,0	0/1:13,1:13:51.53:52,0,121	0/0:7,0:7:12.03:0,12,179	0/1:10,0:9:52.87:71,0,53	0/1:17,0:17:50.84:51,0,118	0/1:20,0:18:56.40:129,0,56	0/1:35,1:31:56.79:163,0,57	0/0:21,0:16:11.29:0,11,155	0/1:25,0:21:96.27:117,0,96	0/1:27,0:25:33.40:205,0,33	0/1:10,0:8:27.59:28,0,37	1/1:20,1:21:1.74:154,2,0	0/0:23,0:22:63.12:0,63,1058	0/0:19,0:15:23.10:0,23,379	0/1:16,0:14:27.13:27,0,113	0/1:22,0:21:15.72:197,0,16	0/1:16,0:16:64.02:94,0,64	0/1:6,0:6:5.69:6,0,67
chr10	65515612	.	T	TTCTCTCTC	8698.48	PASS	AC=36;AF=0.720;AN=50;BaseQRankSum=-1.200;DP=495;FS=15.060;HRun=0;HaplotypeScore=168.6815;InbreedingCoeff=0.8838;MQ=60.40;MQ0=7;MQRankSum=-7.756;QD=28.52;ReadPosRankSum=-4.111;VQSLOD=2.9292;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:72.19:0,72,1722	1/1:3,9:12:8.98:274,9,0	0/0:21,0:8:15.66:0,16,350	0/0:39,0:23:43.43:0,43,727	0/0:23,0:23:57.18:0,57,1327	1/1:12,10:22:18.03:440,18,0	1/1:13,7:20:21.03:574,21,0	1/1:23,0:29:40.08:457,40,0	1/1:8,3:11:18.02:378,18,0	1/1:16,3:19:39.53:1077,40,0	./.	1/1:10,3:13:15:321,15,0	0/0:11,0:11:27.09:0,27,689	1/1:8,5:13:14.97:393,15,0	1/1:13,3:16:8.91:73,9,0	1/1:12,3:16:15.02:291,15,0	1/1:15,5:20:30.05:942,30,0	1/1:12,3:15:15.05:483,15,0	1/1:25,2:27:57.15:1399,57,0	1/1:10,8:18:3.01:49,3,0	./.	./.	0/0:10,0:10:27.07:0,27,585	0/0:19,0:19:42.09:0,42,907	1/1:12,6:18:2.62:127,3,0	1/1:11,4:15:27.07:722,27,0	1/1:9,3:12:20.98:447,21,0	1/1:7,1:8:9.02:252,9,0
chr10	65515650	.	GTGTGTGTGTGTGTGTGTGT	G	1442.34	PASS	AB=1.000;AC=28;AF=0.538;AN=52;BaseQRankSum=6.867;DP=495;FS=2.540;HRun=0;HaplotypeScore=179.9275;InbreedingCoeff=0.5142;MQ=35.59;MQ0=52;MQRankSum=-7.657;QD=7.36;ReadPosRankSum=0.188;VQSLOD=2.8991;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:85.19:0,85,4566	1/1:10,0:10:3.90:40,4,0	0/0:52,0:7:20.95:0,21,257	0/0:75,0:14:23.83:0,24,518	0/0:23,0:23:33.11:0,33,1862	1/1:14,0:14:3.01:37,3,0	0/0:12,0:10:3.01:0,3,58	0/1:19,0:19:26.57:147,0,27	0/0:6,0:6:2.59:0,3,60	1/1:13,0:13:12.04:167,12,0	./.	1/1:8,0:8:6:61,6,0	0/0:14,0:13:32.14:0,32,1676	1/1:10,0:9:3.29:37,3,0	1/1:12,0:12:1.83:4,2,0	1/1:12,1:11:9.03:363,9,0	0/1:13,0:12:8.82:66,0,9	1/1:7,7:12:6.02:139,6,0	0/1:15,0:11:1.62:130,0,2	0/1:14,0:13:0:0,0,0	0/0:15,0:11:2.37:0,2,8	./.	0/0:12,0:12:22.84:0,23,1492	0/0:27,0:27:48.64:0,49,3123	1/1:13,0:13:1.36:3,1,0	1/1:11,0:10:12.04:171,12,0	1/1:10,0:10:13.58:158,14,0	1/1:7,0:6:6.01:86,6,0
chr10	65515654	.	GTGTGTGTGTGTGTGT	G	2442.45	PASS	AC=34;AF=0.654;AN=52;BaseQRankSum=6.445;DP=512;FS=3.301;HRun=0;HaplotypeScore=156.8137;InbreedingCoeff=0.6661;MQ=34.95;MQ0=61;MQRankSum=-7.029;QD=11.41;ReadPosRankSum=-0.775;VQSLOD=2.4272;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:41:88.20:0,88,3624	1/1:10,0:10:3.90:40,4,0	0/0:55,0:7:21.02:0,21,241	0/0:82,0:17:32.84:0,33,507	0/0:21,0:21:33.11:0,33,1418	1/1:9,5:14:2.88:99,3,0	0/0:14,1:11:3:0,3,29	1/1:18,0:18:26.70:283,27,0	0/0:7,0:6:1.95:0,2,8	1/1:5,6:11:12.04:238,12,0	./.	1/1:3,4:7:6.02:128,6,0	0/0:15,0:14:32.61:0,33,1302	1/1:9,1:9:3.56:37,4,0	1/1:7,5:11:1.36:3,1,0	1/1:10,4:11:9.03:346,9,0	1/1:13,2:14:1.16:159,1,0	1/1:14,0:11:6.02:92,6,0	1/1:12,3:11:15.05:308,15,0	1/1:16,1:14:2.93:63,3,0	1/1:15,0:10:3.01:63,3,0	./.	0/0:13,0:13:25.02:0,25,1214	0/0:26,0:26:51.64:0,52,2445	1/1:5,7:12:0.94:2,1,0	1/1:5,8:11:12.04:242,12,0	1/1:8,2:10:13.86:250,14,0	1/1:3,4:6:9.03:265,9,0
chr10	65515658	.	GTGTGTGTGTGT	G	1958.10	PASS	AC=36;AF=0.692;AN=52;BaseQRankSum=6.952;DP=511;FS=2.245;HRun=0;HaplotypeScore=136.4360;InbreedingCoeff=0.6721;MQ=34.82;MQ0=57;MQRankSum=-6.895;QD=8.70;ReadPosRankSum=-0.563;VQSLOD=2.6698;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:41:73.15:0,73,2633	1/1:10,0:10:3.90:40,4,0	0/0:52,0:7:21.02:0,21,240	0/0:83,0:18:42.03:0,42,535	0/0:21,0:21:33.11:0,33,1040	1/1:13,0:13:2.90:53,3,0	0/0:13,0:9:3:0,3,28	1/1:19,0:19:27.04:317,27,0	1/1:7,0:6:3.01:44,3,0	1/1:11,0:11:12.04:192,12,0	./.	1/1:7,0:7:6.02:82,6,0	0/0:14,0:13:32.14:0,32,921	1/1:8,2:9:3.41:37,3,0	1/1:12,1:10:0.94:2,1,0	1/1:14,1:11:9.03:245,9,0	1/1:15,0:15:3.65:116,4,0	1/1:13,0:10:6.02:77,6,0	1/1:12,1:8:15.05:277,15,0	1/1:19,0:14:2.90:38,3,0	1/1:16,0:10:3.01:38,3,0	./.	0/0:13,0:13:28.03:0,28,928	0/0:25,0:26:54.23:0,54,1837	1/1:12,0:12:0.94:2,1,0	1/1:14,0:11:12.04:196,12,0	1/1:10,0:10:14.09:205,14,0	1/1:7,0:6:9.03:174,9,0
chr10	65515660	.	GTGTGTGTGT	G	1904.89	PASS	AC=36;AF=0.692;AN=52;BaseQRankSum=6.770;DP=506;FS=1.386;HRun=0;HaplotypeScore=124.8403;InbreedingCoeff=0.6743;MQ=36.43;MQ0=59;MQRankSum=-7.017;QD=8.50;ReadPosRankSum=-1.279;VQSLOD=2.4725;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:41:80.16:0,80,2218	1/1:8,0:8:3.90:40,4,0	0/0:51,0:7:21.02:0,21,239	0/0:84,0:18:45:0,45,552	0/0:19,0:19:33.11:0,33,849	1/1:13,0:13:2.90:42,3,0	0/0:11,0:8:3:0,3,28	1/1:19,0:19:30.05:358,30,0	1/1:2,4:5:3.01:88,3,0	1/1:11,0:11:12.04:178,12,0	./.	1/1:7,0:7:6.02:68,6,0	0/0:13,0:12:32.13:0,32,736	1/1:11,0:9:3.53:37,4,0	1/1:13,0:10:0.47:2,0,0	1/1:15,0:11:8.89:194,9,0	1/1:16,0:15:1.73:99,2,0	1/1:13,0:10:6.02:76,6,0	1/1:13,0:8:15.05:251,15,0	1/1:19,0:14:2.92:38,3,0	1/1:18,0:11:6.02:76,6,0	./.	0/0:13,0:13:28.03:0,28,783	0/0:26,0:26:53.35:0,53,1549	1/1:11,0:11:0.94:2,1,0	1/1:14,0:11:12.04:182,12,0	1/1:10,0:10:14.04:191,14,0	1/1:7,0:6:9.03:161,9,0
chr10	65515668	.	GT	G	1450.71	PASS	AB=0.775;AC=38;AF=0.704;AN=54;BaseQRankSum=5.887;DP=464;FS=0.000;HRun=2;HaplotypeScore=85.0080;InbreedingCoeff=0.5952;MQ=37.15;MQ0=54;MQRankSum=-5.825;QD=6.28;ReadPosRankSum=-1.796;VQSLOD=-0.0370;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,1:38:29.88:0,30,970	1/1:1,5:6:3:38,3,0	0/0:44,0:7:21.02:0,21,239	0/0:73,0:20:44.99:0,45,553	0/0:15,0:15:31.53:0,32,373	1/1:7,3:10:2.90:38,3,0	0/1:2,9:7:21.50:32,0,22	1/1:3,13:16:36.07:440,36,0	1/1:6,0:5:2.84:14,3,0	1/1:8,3:10:11.90:126,12,0	1/1:2,7:6:3.01:38,3,0	1/1:5,2:7:5.76:76,6,0	0/0:13,0:12:30.19:0,30,338	1/1:5,7:9:3.01:36,3,0	0/1:11,0:8:0.25:0,0,0	1/1:13,1:10:8.26:49,8,0	1/1:13,2:14:1.63:44,2,0	1/1:9,2:8:6.02:76,6,0	1/1:8,3:7:14.65:139,15,0	1/1:1,17:13:3.01:38,3,0	1/1:9,8:10:6.02:76,6,0	./.	0/0:14,0:14:29.06:0,29,359	0/0:25,0:25:52:0,52,671	1/1:8,4:11:0.47:1,0,0	1/1:12,2:11:11.71:126,12,0	1/1:6,7:12:16.17:168,16,0	1/1:6,1:6:8.74:72,9,0
chr10	65515669	.	T	TG	1354.89	PASS	AB=0.798;AC=36;AF=0.667;AN=54;BaseQRankSum=4.635;DP=445;FS=3.142;HRun=1;HaplotypeScore=79.8351;InbreedingCoeff=0.5351;MQ=37.52;MQ0=51;MQRankSum=-5.029;QD=6.33;ReadPosRankSum=-2.930;VQSLOD=-0.4597;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,1:38:60.80:0,61,992	1/1:5,0:5:3.01:38,3,0	0/0:43,0:7:21.02:0,21,239	0/0:71,0:20:45.01:0,45,558	0/0:13,0:15:33.04:0,33,401	1/1:8,0:8:2.90:38,3,0	0/1:11,0:7:21.50:32,0,22	1/1:15,0:15:36.07:440,36,0	0/1:4,1:4:0:0,0,0	1/1:9,0:8:11.83:124,12,0	1/1:7,2:6:3.01:38,3,0	1/1:7,0:7:5.97:76,6,0	0/0:13,0:12:30.17:0,30,331	1/1:10,2:9:3.07:36,3,0	0/1:7,3:7:0.23:0,0,0	1/1:12,0:8:0.39:43,0,0	0/1:4,9:12:2.58:32,0,3	1/1:10,1:8:6.02:76,6,0	1/1:10,0:6:12.18:124,12,0	1/1:18,0:13:3.01:38,3,0	1/1:15,0:8:6.02:76,6,0	./.	0/0:14,0:14:29.09:0,29,362	0/0:26,0:26:17.18:0,17,607	1/1:11,1:11:0.42:1,0,0	1/1:10,3:10:7.43:112,7,0	1/1:11,1:11:12.75:155,13,0	1/1:7,0:6:3.80:44,4,0
chr10	65515863	.	AATTCCTGGAAG	A	21133.36	PASS	AC=40;AF=0.741;AN=54;BaseQRankSum=14.583;DP=462;FS=0.401;HRun=0;HaplotypeScore=164.2348;InbreedingCoeff=0.9844;MQ=81.95;MQ0=0;MQRankSum=-13.669;QD=71.16;ReadPosRankSum=0.792;VQSLOD=4.7863;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:96.33:0,96,5169	1/1:3,4:7:12.04:414,12,0	0/0:18,0:18:48.15:0,48,2424	0/0:16,0:17:38.19:0,38,1806	0/0:34,0:34:96.33:0,96,5213	1/1:4,12:16:30.10:1034,30,0	1/1:0,14:14:33.11:1123,33,0	1/1:11,16:27:48.15:1416,48,0	1/1:0,6:6:18.06:620,18,0	1/1:3,19:22:54.15:1571,54,0	1/1:1,15:16:42.14:1435,42,0	1/1:4,7:11:24.08:786,24,0	0/0:19,0:19:54.19:0,54,2940	1/1:3,11:14:30.10:1034,30,0	1/1:1,17:18:39.13:1324,39,0	1/1:2,15:17:36.12:1241,36,0	1/1:4,13:17:26.87:779,27,0	1/1:2,7:9:18.02:537,18,0	1/1:2,13:15:39.12:1098,39,0	1/1:3,20:23:57.15:1857,57,0	1/1:0,6:6:12.04:402,12,0	1/1:0,11:11:33.11:1078,33,0	0/0:21,0:21:60.21:0,60,3181	0/0:17,0:17:45.15:0,45,2497	1/1:1,15:16:33.11:1128,33,0	1/1:3,20:23:51.11:1429,51,0	1/1:1,8:9:24.08:826,24,0	./.
chr10	65516972	.	T	TA	20564.61	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=0.081;DP=710;FS=0.315;HRun=1;HaplotypeScore=85.7027;InbreedingCoeff=0.9994;MQ=91.66;MQ0=0;MQRankSum=-5.005;QD=39.47;ReadPosRankSum=1.812;VQSLOD=5.3690;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,132,1680	1/1:0,12:12:30.06:424,30,0	0/0:31,0:31:86.98:0,87,1080	0/0:25,0:25:63:0,63,721	0/0:20,0:20:57.19:0,57,739	1/1:0,18:18:48.16:719,48,0	1/1:2,35:37:96.33:1438,96,0	1/1:1,20:20:57.13:757,57,0	1/1:0,26:26:75.25:1123,75,0	1/1:2,24:26:69.23:1034,69,0	1/1:1,29:31:87.29:1294,87,0	1/1:0,27:27:72.24:1078,72,0	0/0:25,0:25:75.19:0,75,929	1/1:0,19:19:54.18:804,54,0	1/1:0,37:37:90.30:1348,90,0	1/1:1,25:26:66.22:989,66,0	1/1:0,32:32:90.30:1348,90,0	1/1:5,9:14:30.06:424,30,0	1/1:1,22:23:69.15:958,69,0	1/1:0,26:26:78.21:1142,78,0	1/1:2,24:26:57.19:853,57,0	1/1:0,23:23:60.20:898,60,0	0/0:17,0:17:48.15:0,48,610	0/0:27,0:27:78.22:0,78,982	1/1:0,20:20:57.19:854,57,0	1/1:0,22:22:63.17:884,63,0	1/1:0,46:47:99:1836,123,0	1/1:0,8:8:24.08:359,24,0
chr10	65517858	.	A	AAC	12404.05	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=-3.931;DP=403;FS=15.079;HRun=0;HaplotypeScore=75.1515;InbreedingCoeff=0.9621;MQ=64.35;MQ0=1;MQRankSum=-2.081;QD=41.76;ReadPosRankSum=1.886;VQSLOD=5.5843;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:81.14:0,81,1083	1/1:1,4:5:14.72:217,15,0	0/0:14,0:6:6.82:0,7,101	0/0:15,0:9:13.81:0,14,166	0/0:26,0:26:74.99:0,75,1016	1/1:3,15:18:48.24:859,48,0	1/1:0,12:13:36.12:621,36,0	1/1:6,9:15:36.03:562,36,0	1/1:4,5:9:14.99:298,15,0	1/1:1,25:27:81.22:1302,81,0	1/1:2,14:16:39.98:643,40,0	1/1:2,8:10:27.08:437,27,0	0/0:9,0:9:27.01:0,27,324	1/1:0,10:10:27.09:466,27,0	1/1:1,7:9:23.10:346,23,0	1/1:4,15:20:41.20:836,41,0	1/1:7,16:24:34.99:783,35,0	1/1:2,11:13:36.08:577,36,0	1/1:5,8:14:36.05:542,36,0	1/1:2,8:10:20.81:322,21,0	1/1:0,8:8:24:376,24,0	1/1:0,7:7:21.07:361,21,0	0/0:8,0:8:24:0,24,296	0/0:4,0:4:12:0,12,147	1/1:1,14:15:39.13:670,39,0	1/1:2,22:24:69.22:1149,69,0	1/1:5,11:15:22.74:584,23,0	1/1:4,10:11:17.11:452,17,0
chr10	65517890	.	AG	A	1197.28	PASS	AB=0.976;AC=29;AF=0.518;AN=56;BaseQRankSum=8.004;DP=410;FS=10.374;HRun=1;HaplotypeScore=112.8251;InbreedingCoeff=-0.0512;MQ=60.72;MQ0=10;MQRankSum=-7.730;QD=4.16;ReadPosRankSum=5.413;VQSLOD=-0.2910;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:55.94:0,56,887	1/1:2,1:3:8.28:51,8,0	0/1:34,3:9:13.96:14,0,101	0/0:58,1:16:9.55:0,10,154	0/0:26,0:26:65.22:0,65,1090	0/1:13,0:13:39.93:60,0,40	0/1:3,0:3:4.51:5,0,19	0/1:16,0:16:6.61:7,0,16	1/1:9,0:9:15.22:81,15,0	0/1:18,0:18:54.19:54,0,72	0/1:16,0:16:65.79:66,0,86	0/1:5,1:6:9.48:43,0,9	0/0:6,0:6:17.73:0,18,235	1/1:8,0:8:15.52:59,16,0	0/1:7,0:7:5.57:38,0,6	0/1:20,0:20:4.70:124,0,5	0/1:25,0:25:32.88:141,0,33	0/1:14,0:14:37.32:40,0,37	0/1:22,0:22:51.22:51,0,68	0/1:5,1:6:8.93:51,0,9	1/1:6,0:6:12.24:45,12,0	0/1:5,0:5:16.02:37,0,16	0/0:5,0:5:6.76:0,7,158	0/0:2,0:2:2.88:0,3,46	1/1:15,0:15:36.62:153,37,0	1/1:16,0:16:22.04:77,22,0	1/1:12,1:13:28.65:141,29,0	0/1:9,0:7:29.41:37,0,29
chr10	65517891	.	GT	G	5365.42	PASS	AB=1.000;AC=43;AF=0.768;AN=56;BaseQRankSum=1.467;DP=427;FS=0.517;HRun=9;HaplotypeScore=104.9925;InbreedingCoeff=0.8015;MQ=59.52;MQ0=11;MQRankSum=-4.477;QD=17.94;ReadPosRankSum=1.926;VQSLOD=4.6173;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:54.72:0,55,602	1/1:1,2:3:9:82,9,0	0/1:42,0:9:2.44:2,0,83	0/0:59,2:16:15.49:0,15,133	0/0:26,1:27:48.16:0,48,777	1/1:6,9:15:29.83:271,30,0	1/1:0,2:2:6:54,6,0	1/1:3,15:16:45.02:412,45,0	1/1:3,6:9:23.87:199,24,0	1/1:5,13:18:42.02:383,42,0	1/1:8,8:16:14.69:200,15,0	1/1:3,3:6:14.97:128,15,0	0/0:7,0:7:18.05:0,18,203	1/1:1,7:8:21.01:190,21,0	1/1:3,4:7:18:161,18,0	1/1:6,14:20:50.94:454,51,0	1/1:9,17:26:55.98:530,56,0	1/1:3,11:14:30.01:274,30,0	1/1:5,17:22:53.98:485,54,0	1/1:2,4:6:15.01:137,15,0	1/1:0,6:6:18.01:164,18,0	1/1:3,1:4:5.19:38,5,0	0/0:5,0:5:4:0,4,97	0/0:2,0:2:2.88:0,3,33	1/1:3,12:15:37.05:355,37,0	1/1:4,14:18:47.84:438,48,0	1/1:6,9:15:24.42:287,24,0	1/1:4,5:7:14.83:120,15,0
chr10	65517920	.	GGTTTTT	G	3523.37	PASS	AB=0.972;AC=35;AF=0.625;AN=56;BaseQRankSum=1.510;DP=529;FS=52.365;HRun=0;HaplotypeScore=124.9009;InbreedingCoeff=-0.2831;MQ=35.35;MQ0=66;MQRankSum=-1.282;QD=10.10;ReadPosRankSum=-0.670;VQSLOD=0.5321;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:20,0:20:99:113,0,278	1/1:2,0:3:8.94:98,9,0	0/0:75,0:10:24.87:0,25,251	0/0:103,0:19:28.99:0,29,370	0/1:24,0:22:22.58:23,0,347	1/1:13,0:11:26.80:295,27,0	0/1:5,0:4:30.32:46,0,30	0/1:18,0:12:78.09:110,0,78	0/1:11,0:11:26.47:46,0,26	0/1:22,0:18:76.87:77,0,264	0/1:15,0:14:38.56:39,0,236	0/1:4,1:5:2.93:112,0,3	0/1:7,0:8:20.40:20,0,100	0/1:12,1:10:16.18:111,0,16	0/1:9,0:7:5.21:92,0,5	1/1:15,0:16:1.80:193,2,0	0/1:34,0:31:83.85:219,0,84	0/1:18,0:17:14.66:107,0,15	1/1:17,0:14:36.58:256,37,0	1/1:7,0:7:15.81:118,16,0	0/1:10,0:8:43.26:44,0,43	1/1:3,1:4:8.99:124,9,0	0/1:6,0:3:10.71:11,0,39	0/1:2,0:2:12.01:12,0,31	1/1:18,3:18:39.52:394,40,0	1/1:20,0:19:46.16:418,46,0	0/1:14,0:13:37.10:222,0,37	1/1:7,1:6:14.99:224,15,0
chr10	65518182	.	C	CG	3441.58	PASS	AC=30;AF=0.600;AN=50;BaseQRankSum=6.279;DP=309;FS=2.517;HRun=0;HaplotypeScore=55.1327;InbreedingCoeff=0.8977;MQ=39.74;MQ0=38;MQRankSum=-6.539;QD=20.86;ReadPosRankSum=-2.291;VQSLOD=4.2631;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:38:96.30:0,96,1317	./.	0/0:1,0:1:3.01:0,3,42	./.	0/0:16,0:14:36.12:0,36,501	1/1:4,10:13:29.68:285,30,0	1/1:4,4:4:9.03:123,9,0	0/0:9,0:9:26.82:0,27,205	1/1:2,5:6:12.04:154,12,0	0/0:12,0:9:22.19:0,22,165	0/0:9,0:9:23.80:0,24,194	1/1:2,12:13:33.10:436,33,0	0/0:10,0:8:24.08:0,24,329	1/1:5,8:8:18.95:252,19,0	1/1:5,5:10:27.84:292,28,0	1/1:1,13:13:33.06:419,33,0	1/1:8,13:17:25.16:423,25,0	0/0:23,0:21:41.12:0,41,280	1/1:9,6:8:13.30:207,13,0	1/1:5,2:4:8.88:77,9,0	1/1:6,2:5:8.74:56,9,0	./.	0/0:10,0:7:18.06:0,18,250	0/0:11,0:7:18.06:0,18,248	1/1:2,6:6:15.52:200,16,0	1/1:1,10:10:27.08:343,27,0	1/1:5,4:7:15.45:158,15,0	1/1:1,5:2:2.92:17,3,0
chr10	65518204	.	AAT	A	1749.69	PASS	AB=1.000;AC=38;AF=0.679;AN=56;BaseQRankSum=9.460;DP=327;FS=7.598;HRun=0;HaplotypeScore=64.5108;InbreedingCoeff=0.4882;MQ=47.14;MQ0=26;MQRankSum=-5.074;QD=7.71;ReadPosRankSum=-2.033;VQSLOD=1.7923;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:43:99:0,120,1882	1/1:6,1:6:8.07:63,8,0	0/0:4,0:2:6.02:0,6,82	0/1:6,0:2:14.01:14,0,45	0/0:17,0:17:45.07:0,45,634	1/1:13,2:14:32.46:192,32,0	1/1:3,1:3:5.61:53,6,0	1/1:10,0:10:24.76:132,25,0	0/0:10,0:9:24.05:0,24,353	0/1:14,0:13:99:126,0,106	0/1:13,0:13:36.29:36,0,118	1/1:14,0:12:0.02:54,0,0	0/0:6,0:4:9.02:0,9,152	1/1:7,0:6:7.65:30,8,0	1/1:9,0:9:18.25:73,18,0	1/1:11,0:10:24.75:144,25,0	1/1:22,3:25:53.68:271,54,0	1/1:23,0:21:35.04:150,35,0	0/1:19,0:17:10.01:138,0,10	1/1:6,0:4:5.68:38,6,0	1/1:6,0:5:10.88:73,11,0	1/1:1,0:1:2.97:20,3,0	0/0:7,0:5:12.02:0,12,156	0/0:11,0:7:12.03:0,12,182	1/1:6,1:5:5.27:21,5,0	1/1:14,0:13:12.73:143,13,0	1/1:9,1:9:20.21:154,20,0	1/1:6,0:2:2.68:11,3,0
chr10	65518205	.	AT	A	4912.34	PASS	AB=0.978;AC=39;AF=0.696;AN=56;BaseQRankSum=7.846;DP=326;FS=10.043;HRun=1;HaplotypeScore=49.1042;InbreedingCoeff=0.6145;MQ=47.68;MQ0=25;MQRankSum=-4.871;QD=22.03;ReadPosRankSum=-2.127;VQSLOD=3.2741;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:43:99:0,120,1494	1/1:2,5:6:8.92:102,9,0	0/0:5,0:3:8.99:0,9,107	0/1:6,0:2:7.78:8,0,34	0/0:18,0:18:48.07:0,48,550	1/1:3,11:13:35.96:426,36,0	1/1:2,2:3:5.97:60,6,0	1/1:0,9:9:27.06:334,27,0	0/0:10,0:9:24.05:0,24,287	0/1:13,0:12:31.66:134,0,32	0/1:13,1:14:30.27:159,0,30	1/1:2,12:12:17.42:310,17,0	0/0:6,0:4:9.02:0,9,120	1/1:1,6:6:9.03:120,9,0	1/1:0,9:9:20.83:286,21,0	1/1:4,7:10:27.07:325,27,0	1/1:3,22:25:59.84:746,60,0	1/1:4,19:21:39.13:541,39,0	1/1:3,16:17:32.16:454,32,0	1/1:3,3:4:6.01:68,6,0	1/1:0,5:5:12.03:152,12,0	1/1:1,0:1:2.97:20,3,0	0/0:8,0:6:15.02:0,15,161	0/0:11,0:7:11.94:0,12,136	1/1:2,5:5:6.02:82,6,0	1/1:8,6:13:29.29:329,29,0	1/1:7,3:9:20.94:213,21,0	1/1:0,5:2:3.01:42,3,0
chr10	65518537	.	TC	T	9475.51	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=11.990;DP=544;FS=10.731;HRun=7;HaplotypeScore=106.1211;InbreedingCoeff=0.9956;MQ=72.57;MQ0=0;MQRankSum=-11.997;QD=25.34;ReadPosRankSum=-0.079;VQSLOD=3.9525;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:57:99:0,153,1905	1/1:2,6:8:21.04:213,21,0	0/0:19,0:18:45.01:0,45,509	0/0:23,0:24:45.96:0,46,516	0/0:20,0:20:51.15:0,51,630	1/1:2,26:28:78.17:795,78,0	1/1:3,14:17:42.09:428,42,0	1/1:10,23:33:69.09:685,69,0	1/1:4,17:21:60.09:599,60,0	1/1:2,19:21:57.13:580,57,0	1/1:1,7:8:15.03:150,15,0	1/1:2,15:17:45.10:458,45,0	0/0:17,0:17:48.15:0,48,600	1/1:1,11:12:33.04:327,33,0	1/1:2,17:19:48.10:489,48,0	1/1:1,11:12:33.07:336,33,0	1/1:4,15:19:39.08:397,39,0	1/1:8,13:21:44.68:437,45,0	1/1:10,19:29:69.10:681,69,0	1/1:2,8:10:24.05:244,24,0	1/1:5,14:19:36.08:365,36,0	1/1:1,13:14:39.09:397,39,0	0/0:11,0:11:30.10:0,30,377	0/0:22,0:22:57.18:0,57,716	1/1:2,9:11:30.07:305,30,0	1/1:3,20:23:63.14:642,63,0	1/1:3,16:18:54.12:550,54,0	1/1:0,13:13:39.09:397,39,0
chr10	65518558	.	TC	T	14525.92	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=14.055;DP=541;FS=6.870;HRun=1;HaplotypeScore=101.7721;InbreedingCoeff=0.9991;MQ=67.91;MQ0=0;MQRankSum=-10.819;QD=38.13;ReadPosRankSum=-0.862;VQSLOD=4.3483;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:57:99:0,165,2483	1/1:0,12:12:33.11:460,33,0	0/0:14,1:14:36.03:0,36,526	0/0:17,0:18:31.69:0,32,632	0/0:20,0:20:57.13:0,57,880	1/1:1,24:25:60.45:989,60,0	1/1:3,12:15:45.13:596,45,0	1/1:5,22:26:75.22:986,75,0	1/1:1,19:20:54.10:692,54,0	1/1:0,23:23:69.23:963,69,0	1/1:0,8:8:24.08:335,24,0	1/1:0,20:20:60.20:836,60,0	0/0:18,0:18:54.14:0,54,835	1/1:0,15:15:42.14:586,42,0	1/1:0,24:24:72.21:982,72,0	1/1:1,16:17:51.15:694,51,0	1/1:1,20:21:45.15:627,45,0	1/1:0,17:17:51.17:712,51,0	1/1:0,27:27:81.22:1089,81,0	1/1:0,12:11:30.06:396,30,0	1/1:0,14:14:33.07:438,33,0	1/1:0,15:15:42.14:585,42,0	0/0:14,0:14:42.14:0,42,671	0/0:18,0:18:54.18:0,54,863	1/1:0,11:11:27.09:376,27,0	1/1:1,20:21:60.19:823,60,0	1/1:0,23:23:63.17:857,63,0	1/1:0,14:14:36.12:502,36,0
chr10	65518800	.	G	GT	9573.61	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=9.815;DP=603;FS=8.571;HRun=9;HaplotypeScore=89.2026;InbreedingCoeff=0.8843;MQ=75.91;MQ0=4;MQRankSum=-3.992;QD=22.58;ReadPosRankSum=1.326;VQSLOD=5.2944;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:89.97:0,90,781	1/1:3,4:7:12.03:133,12,0	0/0:36,1:27:36.26:0,36,403	0/0:34,0:24:43.04:0,43,345	0/0:19,0:19:50.98:0,51,443	1/1:3,24:27:40.14:671,40,0	1/1:3,23:26:51.14:564,51,0	1/1:6,34:41:77.59:1045,78,0	1/1:1,16:17:42.11:463,42,0	1/1:2,3:17:42.89:238,43,0	1/1:4,0:14:22.22:111,22,0	1/1:3,11:14:27.07:299,27,0	0/0:19,0:19:44.95:0,45,385	1/1:2,16:18:36.10:398,36,0	1/1:3,21:24:54.15:597,54,0	1/1:1,18:18:48.13:529,48,0	1/1:3,20:25:63.01:666,63,0	1/1:6,22:28:57.63:631,58,0	1/1:9,23:32:66.15:712,66,0	1/1:0,11:11:30.04:316,30,0	1/1:7,11:19:4.03:273,4,0	1/1:3,11:14:33.09:359,33,0	0/0:11,0:11:29.99:0,30,260	0/0:19,0:19:47.94:0,48,409	1/1:2,8:10:0.08:148,0,0	1/1:2,21:23:60.14:651,60,0	1/1:2,20:22:48.13:531,48,0	1/1:3,12:15:1.12:239,1,0
chr10	65519104	.	GTAT	G	1622.04	PASS	AB=0.927;AC=28;AF=0.609;AN=46;BaseQRankSum=3.685;DP=300;FS=0.000;HRun=0;HaplotypeScore=47.8864;InbreedingCoeff=0.1657;MQ=77.10;MQ0=2;MQRankSum=-0.775;QD=7.37;ReadPosRankSum=3.036;VQSLOD=1.4084;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:6.02:0,6,115	1/1:2,1:3:3.01:40,3,0	./.	./.	0/0:13,0:13:18.06:0,18,337	1/1:12,8:22:27.05:331,27,0	./.	0/1:24,0:24:33.60:34,0,84	0/0:10,0:10:3.01:0,3,42	1/1:7,3:10:9.02:105,9,0	0/1:5,0:5:18.84:19,0,35	0/1:9,0:9:18.84:19,0,35	0/0:6,0:8:6.01:0,6,64	1/1:4,6:10:12.04:159,12,0	1/1:7,1:8:3.01:40,3,0	./.	1/1:14,15:29:26.89:338,27,0	1/1:12,0:15:2.98:21,3,0	0/1:17,1:16:30.91:31,0,67	1/1:5,1:6:3.01:40,3,0	0/1:11,4:15:29.63:70,0,30	./.	0/0:4,0:4:3:0,3,27	0/0:5,0:5:3.01:0,3,57	1/1:3,4:7:9.03:119,9,0	0/1:11,3:14:26.92:93,0,27	1/1:6,4:10:6.02:79,6,0	1/1:5,10:14:18.06:238,18,0
chr10	65519147	.	T	TATC	3167.40	PASS	AB=1.000;AC=42;AF=0.778;AN=54;BaseQRankSum=-3.375;DP=272;FS=0.000;HRun=0;HaplotypeScore=46.9220;InbreedingCoeff=0.6516;MQ=72.29;MQ0=1;MQRankSum=1.121;QD=13.77;ReadPosRankSum=-0.574;VQSLOD=2.5331;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:7:18:0,18,195	1/1:6,0:6:16.54:129,17,0	0/0:9,0:7:7.59:0,8,135	0/0:8,0:5:14.93:0,15,126	0/0:11,0:11:33.06:0,33,419	1/1:16,0:16:19.68:159,20,0	1/1:4,0:4:11.99:102,12,0	1/1:23,0:23:56.94:510,57,0	1/1:0,9:9:3.01:66,3,0	1/1:6,0:6:14.23:103,14,0	0/1:4,0:4:5.64:40,0,6	1/1:6,0:6:1.12:84,1,0	0/1:6,0:6:18.37:18,0,62	1/1:12,0:12:23.95:151,24,0	1/1:7,0:7:19.54:155,20,0	1/1:5,0:5:14.98:125,15,0	1/1:21,0:22:14.82:145,15,0	1/1:16,0:16:31.98:254,32,0	1/1:13,0:13:9.30:197,9,0	1/1:6,0:6:16.52:126,17,0	1/1:9,0:9:4.85:95,5,0	1/1:6,0:6:14.98:125,15,0	0/0:6,0:6:15.01:0,15,136	./.	1/1:16,0:16:27.28:260,27,0	1/1:11,0:11:13.02:188,13,0	1/1:12,0:12:24.02:194,24,0	1/1:15,0:14:19.29:113,19,0
chr10	65520112	.	A	AAAAAAG	6227.83	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=0.899;DP=496;FS=52.636;HRun=0;HaplotypeScore=99.8468;InbreedingCoeff=0.8584;MQ=60.71;MQ0=3;MQRankSum=-5.452;QD=16.43;ReadPosRankSum=-7.121;VQSLOD=-0.1898;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:39.23:0,39,851	1/1:5,0:15:20.89:292,21,0	0/0:11,0:8:21.02:0,21,226	0/0:9,0:6:10.05:0,10,86	0/0:12,0:12:32.86:0,33,418	1/1:4,0:21:12:172,12,0	1/1:2,1:15:15.05:309,15,0	1/1:9,0:29:57.77:652,58,0	1/1:2,0:17:4.93:91,5,0	1/1:3,0:17:37.58:443,38,0	1/1:5,0:19:19.62:207,20,0	1/1:2,10:16:3.01:99,3,0	0/0:12,0:12:26.96:0,27,347	1/1:3,0:12:9.03:146,9,0	1/1:12,0:26:25.35:312,25,0	1/1:2,7:13:18.06:447,18,0	1/1:4,14:19:10.28:199,10,0	1/1:3,0:22:12.53:242,13,0	1/1:3,0:20:58.12:694,58,0	1/1:5,19:27:38:328,38,0	1/1:4,0:12:5.96:59,6,0	1/1:7,1:16:29.88:362,30,0	0/0:23,0:23:33.75:0,34,598	0/0:23,0:23:62.94:0,63,1037	1/1:4,0:12:15.04:208,15,0	1/1:4,9:20:49.62:680,50,0	1/1:4,14:24:7.51:169,8,0	1/1:2,0:5:7.84:117,8,0
chr10	65520757	.	AC	A	3222.65	PASS	AB=1.000;AC=41;AF=0.732;AN=56;BaseQRankSum=10.167;DP=658;FS=1.467;HRun=1;HaplotypeScore=172.7635;InbreedingCoeff=0.8756;MQ=59.78;MQ0=0;MQRankSum=3.106;QD=7.13;ReadPosRankSum=2.924;VQSLOD=1.0018;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,132,1760	1/1:11,0:11:20.09:112,20,0	0/0:29,0:22:55.99:0,56,662	0/0:24,0:20:42.72:0,43,477	0/0:36,0:35:99:0,108,1353	1/1:19,0:19:32.12:138,32,0	1/1:12,0:11:26.86:134,27,0	0/1:19,0:19:6.62:35,0,7	1/1:34,0:35:36.56:181,37,0	1/1:28,0:28:55.09:329,55,0	1/1:17,0:17:24.22:131,24,0	1/1:15,0:14:10.69:95,11,0	0/0:20,0:20:60.17:0,60,780	1/1:21,0:21:23.22:103,23,0	1/1:34,0:34:45.42:239,45,0	1/1:29,0:29:46.16:231,46,0	1/1:19,0:19:30.49:148,30,0	1/1:10,8:18:27.15:308,27,0	1/1:17,0:15:9.74:74,10,0	1/1:34,0:34:47.59:227,48,0	1/1:8,0:8:17.62:98,18,0	1/1:18,0:18:24.57:146,25,0	0/0:23,0:23:69.21:0,69,922	0/0:29,0:29:81.15:0,81,1075	1/1:32,0:32:43.62:216,44,0	1/1:27,1:28:40:195,40,0	1/1:36,0:36:59.64:271,60,0	1/1:2,0:2:2.28:11,2,0
chr10	65520763	.	AC	A	4224.84	PASS	AB=0.930;AC=28;AF=0.500;AN=56;BaseQRankSum=17.578;DP=655;FS=19.565;HRun=1;HaplotypeScore=164.5600;InbreedingCoeff=0.0355;MQ=60.85;MQ0=0;MQRankSum=-5.623;QD=9.49;ReadPosRankSum=9.321;VQSLOD=0.3104;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,132,1766	0/1:8,1:9:0.70:117,0,1	0/0:33,0:26:61.30:0,61,754	0/0:23,0:19:42.40:0,42,498	0/0:34,0:33:99:0,102,1328	1/1:17,1:18:45.20:249,45,0	0/1:8,4:11:3.53:96,0,4	0/1:13,8:21:52.05:225,0,52	0/1:33,1:34:64.18:207,0,64	0/1:26,0:26:81.59:257,0,82	1/1:17,0:17:8.09:200,8,0	0/1:13,2:14:2.70:155,0,3	0/0:20,0:20:60.18:0,60,812	0/1:20,1:21:66.87:129,0,67	0/1:32,1:33:52.98:231,0,53	0/1:29,0:29:19.56:206,0,20	1/1:19,0:19:4.83:167,5,0	1/1:8,9:17:24.28:225,24,0	1/1:11,6:15:31.31:271,31,0	0/1:33,1:34:32.59:359,0,33	1/1:6,0:6:11.48:74,11,0	0/1:19,0:19:14.39:191,0,14	0/0:24,0:24:72.21:0,72,963	0/0:32,0:32:90.23:0,90,1181	0/1:32,2:34:18.22:360,0,18	0/1:26,0:26:62.18:190,0,62	0/1:34,2:36:86.36:294,0,86	1/1:2,0:2:5.40:25,5,0
chr10	65520764	.	C	CAA	15960.88	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=16.156;DP=665;FS=9.468;HRun=5;HaplotypeScore=139.3094;InbreedingCoeff=0.9778;MQ=60.84;MQ0=0;MQRankSum=-5.494;QD=35.08;ReadPosRankSum=4.688;VQSLOD=3.4727;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,112,1564	1/1:2,7:9:21:333,21,0	0/0:31,0:24:57.08:0,57,666	0/0:23,0:19:42.69:0,43,440	0/0:34,0:33:90.24:0,90,1115	1/1:1,17:18:48.16:813,48,0	1/1:8,4:10:21.04:326,21,0	1/1:15,7:22:44.97:587,45,0	1/1:7,26:34:69.24:1182,69,0	1/1:7,21:28:60.17:1002,60,0	1/1:1,16:17:45.15:747,45,0	1/1:3,12:15:30.07:469,30,0	0/0:20,0:20:60.19:0,60,760	1/1:5,16:21:33.07:530,33,0	1/1:4,28:32:75.25:1272,75,0	1/1:3,26:30:54.18:942,54,0	1/1:4,17:22:48.16:838,48,0	1/1:10,0:17:26.20:244,26,0	1/1:10,7:15:35.96:474,36,0	1/1:4,30:34:90.15:1461,90,0	1/1:0,6:7:18.06:300,18,0	1/1:2,17:19:51.09:804,51,0	0/0:25,0:25:66.20:0,66,826	0/0:32,0:32:90.27:0,90,1130	1/1:5,30:36:81.23:1355,81,0	1/1:5,22:27:66.16:1078,66,0	1/1:8,27:35:68.21:1101,68,0	1/1:0,2:2:6.02:104,6,0
chr10	65520928	.	GAAAAA	G	11722.47	PASS	AB=0.690;AC=40;AF=0.714;AN=56;BaseQRankSum=8.545;DP=652;FS=2.770;HRun=14;HaplotypeScore=126.5730;InbreedingCoeff=0.6752;MQ=59.32;MQ0=11;MQRankSum=-5.053;QD=25.37;ReadPosRankSum=4.837;VQSLOD=3.4756;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:41:99:0,112,2670	1/1:0,6:6:9.03:149,9,0	0/0:59,0:23:45.38:0,45,628	0/1:39,0:15:1.16:1,0,221	0/0:22,0:23:59.35:0,59,1295	1/1:3,17:20:48.12:767,48,0	1/1:4,17:21:33.96:510,34,0	1/1:8,21:29:52.87:778,53,0	1/1:3,22:25:33.08:533,33,0	1/1:2,20:21:57.14:872,57,0	1/1:3,18:21:51.05:746,51,0	1/1:1,11:11:27.08:399,27,0	0/0:22,0:23:60.19:0,60,1394	1/1:0,14:14:27.09:421,27,0	1/1:4,32:36:69.16:1092,69,0	1/1:2,22:24:45.10:720,45,0	0/1:5,14:19:21.41:356,0,21	0/1:4,0:15:44.70:45,0,49	1/1:2,19:21:50.59:711,51,0	1/1:8,20:28:25.95:596,26,0	1/1:5,4:8:11.21:157,11,0	1/1:1,6:7:11.92:150,12,0	0/0:24,0:26:61.42:0,61,1316	0/0:17,0:17:45.01:0,45,1046	1/1:5,23:28:45.06:683,45,0	1/1:1,19:20:54.11:834,54,0	1/1:8,25:33:66.12:1065,66,0	0/1:4,7:11:22.74:137,0,23
chr10	65521369	.	CAATA	C	2284.54	PASS	AC=28;AF=0.636;AN=44;BaseQRankSum=6.626;DP=322;FS=0.828;HRun=0;HaplotypeScore=71.2746;InbreedingCoeff=0.6615;MQ=84.24;MQ0=2;MQRankSum=-3.216;QD=13.44;ReadPosRankSum=1.382;VQSLOD=3.1511;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:18.06:0,18,425	./.	./.	./.	0/0:9,0:9:3.01:0,3,71	1/1:10,0:18:15.02:140,15,0	1/1:11,0:14:6.01:56,6,0	0/0:28,0:27:15.04:0,15,269	1/1:6,0:7:3:28,3,0	0/0:12,0:12:6.02:0,6,142	0/0:5,0:5:6.02:0,6,142	1/1:5,0:6:3:28,3,0	0/0:4,0:4:3.01:0,3,71	./.	1/1:6,3:9:9.03:140,9,0	1/1:5,1:6:3.01:47,3,0	1/1:18,15:33:42.14:655,42,0	0/0:20,0:20:36.12:0,36,850	1/1:16,10:24:30.08:443,30,0	1/1:6,3:9:6.02:94,6,0	./.	1/1:3,0:4:3:28,3,0	./.	0/0:4,0:7:6.02:0,6,105	1/1:6,0:10:9.01:84,9,0	1/1:7,7:14:21.07:328,21,0	1/1:5,6:11:18.06:281,18,0	1/1:1,2:3:6.02:94,6,0
chr10	65521466	.	CCACAATGTTTTTAATTCTAGTA	C	5830.90	PASS	AB=0.714;AC=13;AF=0.241;AN=54;BaseQRankSum=8.770;DP=328;FS=17.212;HRun=0;HaplotypeScore=196.2387;InbreedingCoeff=0.8257;MQ=84.43;MQ0=0;MQRankSum=-7.922;QD=88.35;ReadPosRankSum=2.984;VQSLOD=3.5270;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:72.25:0,72,7090	0/0:1,0:1:3.01:0,3,316	0/0:13,0:12:18.06:0,18,1061	0/0:17,0:16:40.01:0,40,1275	0/0:20,0:20:60.21:0,60,5621	0/0:12,0:12:12.04:0,12,1018	0/0:16,0:16:42.13:0,42,3427	0/0:30,0:30:81.27:0,81,6270	0/0:7,0:7:18.06:0,18,1592	0/0:12,0:12:36.08:0,36,3161	0/0:9,0:9:27.09:0,27,2220	0/0:9,0:9:27.09:0,27,2386	0/0:9,0:9:27.09:0,27,2727	0/0:4,0:4:12.04:0,12,1176	1/1:0,3:3:9.03:551,9,0	0/0:6,0:6:18.06:0,18,1893	1/1:7,4:11:21.07:1262,21,0	0/0:13,0:13:39.09:0,39,3199	1/1:12,2:14:15.03:678,15,0	1/1:5,4:9:18.06:953,18,0	./.	0/0:10,0:10:27.09:0,27,2279	0/0:12,0:12:36.12:0,36,3528	0/0:13,0:13:39.13:0,39,3815	0/0:22,0:22:51.18:0,51,4387	0/1:6,4:10:57.72:720,0,58	1/1:5,4:9:12.04:724,12,0	1/1:5,5:10:18.04:942,18,0
chr10	65521467	.	CACA	C	591.39	PASS	AB=1.000;AC=13;AF=0.241;AN=54;BaseQRankSum=9.365;DP=326;FS=17.203;HRun=0;HaplotypeScore=90.5214;InbreedingCoeff=0.8247;MQ=84.58;MQ0=0;MQRankSum=-7.335;QD=9.10;ReadPosRankSum=2.753;VQSLOD=1.6861;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:72.25:0,72,1693	0/0:1,0:1:3.01:0,3,71	0/0:13,0:12:18.06:0,18,396	0/0:18,0:16:30.68:0,31,613	0/0:20,0:20:60.21:0,60,1418	0/0:11,0:11:12.04:0,12,283	0/0:15,0:15:42.13:0,42,943	0/0:30,0:30:81.27:0,81,1851	0/0:7,0:7:18.06:0,18,425	0/0:12,0:12:36.08:0,36,801	0/0:9,0:9:27.09:0,27,635	0/0:9,0:9:27.09:0,27,635	0/0:9,0:9:27.09:0,27,638	0/0:4,0:4:12.04:0,12,284	1/1:3,0:3:8.95:66,9,0	0/0:6,0:6:18.06:0,18,425	1/1:9,2:11:20.28:143,20,0	0/0:14,0:14:42.10:0,42,919	1/1:13,0:13:14.96:137,15,0	1/1:8,1:9:17.83:126,18,0	./.	0/0:10,0:10:24.08:0,24,560	0/0:12,0:12:36.12:0,36,849	0/0:13,0:13:39.13:0,39,921	0/0:22,0:22:45.15:0,45,1062	0/1:10,0:10:57.82:74,0,58	1/1:9,0:9:11.93:90,12,0	1/1:10,0:10:17.91:136,18,0
chr10	65521472	.	T	TTGGG	166.65	PASS	AB=0.926;AC=11;AF=0.204;AN=54;BaseQRankSum=7.821;DP=292;FS=24.779;HRun=0;HaplotypeScore=97.0749;InbreedingCoeff=0.5429;MQ=79.34;MQ0=0;MQRankSum=-6.387;QD=3.47;ReadPosRankSum=3.062;VQSLOD=-0.0126;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:75.24:0,75,1514	0/0:1,0:1:3.01:0,3,63	0/0:8,0:6:14.95:0,15,301	0/1:17,0:15:2.14:2,0,397	0/0:21,0:21:60.21:0,60,1240	0/0:11,0:11:12.04:0,12,251	0/0:13,0:13:39.13:0,39,791	0/0:29,0:29:78.27:0,78,1632	0/0:8,0:8:18.06:0,18,374	0/0:11,0:11:33.11:0,33,692	0/0:9,0:9:27.09:0,27,541	0/0:9,0:9:27.09:0,27,545	0/0:9,0:9:27.09:0,27,566	0/0:4,0:4:12.04:0,12,252	1/1:3,0:3:1.55:9,2,0	0/0:6,0:6:18.06:0,18,377	0/1:5,2:7:13.96:78,0,14	0/0:15,0:15:12.38:0,12,749	1/1:5,0:5:9.92:102,10,0	1/1:4,1:5:7.21:66,7,0	./.	0/0:12,0:12:27.09:0,27,555	0/0:12,0:12:33.11:0,33,692	0/0:13,0:13:39.13:0,39,807	0/0:22,0:22:48.16:0,48,979	0/0:4,0:4:1.58:0,2,5	0/1:5,0:5:5.97:19,0,6	1/1:5,0:5:8.78:33,9,0
chr10	65521492	.	TG	T	1818.90	PASS	AB=0.975;AC=34;AF=0.630;AN=54;BaseQRankSum=2.595;DP=355;FS=0.548;HRun=5;HaplotypeScore=85.8576;InbreedingCoeff=0.5777;MQ=66.89;MQ0=4;MQRankSum=-4.467;QD=9.62;ReadPosRankSum=-1.426;VQSLOD=0.4094;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:61.43:0,61,896	1/1:1,0:1:2.99:24,3,0	0/0:45,0:13:5.66:0,6,191	0/0:23,0:10:14.46:0,14,133	0/0:18,0:18:48.62:0,49,478	1/1:10,0:10:7.96:40,8,0	1/1:11,0:11:14.24:95,14,0	1/1:27,1:27:68.71:574,69,0	1/1:7,0:6:7.38:38,7,0	1/1:10,0:10:21.47:139,21,0	1/1:8,0:8:23.49:156,23,0	1/1:10,0:10:18.27:127,18,0	0/0:10,0:10:27.04:0,27,306	1/1:4,0:4:8.94:77,9,0	0/0:7,0:7:0.58:0,1,8	1/1:7,0:7:6.23:86,6,0	0/1:11,0:11:14.90:37,0,15	1/1:11,0:11:22.29:140,22,0	0/1:8,1:9:7.11:67,0,7	0/1:8,0:8:5.83:16,0,6	./.	0/1:12,0:12:2.29:58,0,2	0/0:14,0:14:35.92:0,36,377	0/0:16,0:16:48.15:0,48,616	1/1:13,2:15:21.60:137,22,0	1/1:10,0:10:15.52:81,16,0	1/1:9,0:9:7.15:59,7,0	1/1:7,1:8:5.81:54,6,0
chr10	65521496	.	G	GTTT	1121.87	PASS	AB=0.873;AC=27;AF=0.482;AN=56;BaseQRankSum=4.796;DP=376;FS=0.596;HRun=0;HaplotypeScore=111.4017;InbreedingCoeff=0.2144;MQ=64.98;MQ0=6;MQRankSum=-5.310;QD=5.75;ReadPosRankSum=-0.415;VQSLOD=2.6823;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:82.34:0,82,1422	1/1:1,0:1:0.47:1,0,0	0/0:49,0:13:29.52:0,30,431	0/0:26,0:11:11.72:0,12,230	0/0:19,0:18:51.10:0,51,766	0/1:4,0:13:5.30:68,0,5	0/1:8,0:9:0.98:35,0,1	0/1:14,0:25:35.93:36,0,112	0/1:5,2:7:15.12:45,0,15	1/1:7,1:10:14.45:148,14,0	1/1:10,0:10:5.36:90,5,0	0/1:9,0:9:5.66:78,0,6	0/0:10,0:10:30.09:0,30,501	0/0:5,0:5:0.10:0,0,2	0/0:7,0:7:9.86:0,10,32	0/1:8,0:8:6.47:6,0,8	0/1:11,0:11:42.75:43,0,55	1/1:8,1:11:19.85:186,20,0	0/1:8,1:9:11.59:76,0,12	0/1:8,0:8:10.18:33,0,10	1/1:1,0:1:0.89:2,1,0	0/1:3,0:13:6.40:116,0,6	0/0:13,0:13:36:0,36,587	0/0:17,0:17:48.16:0,48,858	1/1:9,5:15:12.17:156,12,0	1/1:12,1:12:4.90:82,5,0	0/1:10,0:10:2.14:24,0,2	1/1:9,0:9:7.95:67,8,0
chr10	65521614	.	T	TG	978.24	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-2.853;DP=504;FS=12.539;HRun=2;HaplotypeScore=72.0619;InbreedingCoeff=0.8906;MQ=75.89;MQ0=0;MQRankSum=-1.003;QD=31.56;ReadPosRankSum=1.017;VQSLOD=2.1985;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,99,1226	0/0:7,0:7:15.03:0,15,173	0/0:15,0:16:36.11:0,36,446	0/0:14,0:14:42.11:0,42,504	0/0:10,0:10:30.09:0,30,372	0/0:16,0:16:45.12:0,45,535	0/0:20,0:20:51.07:0,51,618	0/0:23,0:23:69.21:0,69,845	0/0:11,0:11:33.09:0,33,397	0/0:16,0:16:48.15:0,48,590	0/0:11,0:11:27.08:0,27,334	0/0:16,0:16:45.13:0,45,545	0/0:15,0:15:42.07:0,42,469	0/0:17,0:17:48.14:0,48,583	0/0:18,0:18:48.12:0,48,569	0/0:24,0:24:69.18:0,69,836	0/0:19,0:19:48.15:0,48,595	1/1:2,29:30:75.25:1073,75,0	0/0:26,0:26:72.22:0,72,880	0/0:19,0:19:51.10:0,51,600	0/0:30,0:30:84.23:0,84,1014	0/0:14,0:14:39.12:0,39,483	0/0:18,0:18:45.14:0,45,558	0/0:20,0:20:60.19:0,60,743	0/0:14,0:14:42.13:0,42,520	0/0:22,0:22:57.15:0,57,690	0/0:21,0:21:60.16:0,60,718	0/0:2,0:2:6.02:0,6,74
chr10	65522032	.	A	AT	10603.43	PASS	AB=0.609;AC=37;AF=0.661;AN=56;BaseQRankSum=0.367;DP=621;FS=20.889;HRun=9;HaplotypeScore=130.9052;InbreedingCoeff=0.8705;MQ=72.85;MQ0=1;MQRankSum=1.449;QD=25.55;ReadPosRankSum=0.628;VQSLOD=3.4168;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:95.93:0,96,823	1/1:0,7:7:21.06:232,21,0	0/0:20,0:20:30.34:0,30,276	0/0:9,0:9:8.24:0,8,162	0/0:27,0:27:77.98:0,78,677	1/1:2,22:24:66.18:730,66,0	1/1:4,10:14:33.08:357,33,0	1/1:14,17:31:32.02:524,32,0	1/1:4,18:22:5.18:512,5,0	0/0:28,0:28:80.98:0,81,703	0/0:14,0:14:11.61:0,12,262	1/1:4,18:23:54.15:597,54,0	0/0:26,0:26:74.98:0,75,651	1/1:1,16:17:48.12:524,48,0	1/1:2,20:22:34.11:604,34,0	1/1:1,19:20:51.14:564,51,0	1/1:5,20:25:54.15:597,54,0	1/1:2,16:18:45.12:498,45,0	1/1:7,16:23:28.09:538,28,0	1/1:3,23:26:63.17:697,63,0	0/1:5,9:14:21.89:235,0,22	1/1:3,28:31:84.23:929,84,0	0/0:27,0:27:68.98:0,69,599	0/0:20,0:19:50.99:0,51,443	1/1:4,24:28:68.55:738,69,0	1/1:10,25:35:6.05:752,6,0	1/1:1,25:27:66.01:711,66,0	1/1:0,8:8:24.06:265,24,0
chr10	65522890	.	CT	C	18514.05	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=11.485;DP=694;FS=5.070;HRun=1;HaplotypeScore=70.5908;InbreedingCoeff=0.9995;MQ=86.52;MQ0=0;MQRankSum=-4.523;QD=38.09;ReadPosRankSum=2.457;VQSLOD=5.6231;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:62,0:62:99:0,187,2939	1/1:0,14:14:39.08:545,39,0	0/0:27,0:27:58.50:0,58,1222	0/0:20,0:20:59.94:0,60,917	0/0:26,0:26:72.16:0,72,1097	1/1:0,30:30:78.26:1091,78,0	1/1:0,28:28:75.25:1049,75,0	1/1:0,27:27:81.27:1132,81,0	1/1:1,21:22:58.08:799,58,0	1/1:0,20:20:60.13:775,60,0	1/1:0,20:20:60.16:811,60,0	1/1:0,18:18:54.18:755,54,0	0/0:23,0:23:69.24:0,69,1103	1/1:0,17:17:39.13:546,39,0	1/1:0,29:29:78.26:1091,78,0	1/1:0,20:20:57.19:797,57,0	1/1:0,32:32:93.31:1301,93,0	1/1:0,12:12:33.11:461,33,0	1/1:0,13:13:39.13:546,39,0	1/1:0,25:25:66.18:899,66,0	1/1:0,70:70:99:2643,190,0	1/1:0,21:21:54.14:733,54,0	0/0:21,0:21:63.16:0,63,978	0/0:29,0:29:87.28:0,87,1361	1/1:0,15:15:39.13:545,39,0	1/1:0,21:21:63.19:863,63,0	1/1:0,23:23:57.19:797,57,0	1/1:0,9:9:24.08:336,24,0
chr10	65523318	.	C	CT	2068.08	PASS	AB=0.805;AC=32;AF=0.615;AN=52;BaseQRankSum=-4.903;DP=402;FS=0.000;HRun=9;HaplotypeScore=44.1794;InbreedingCoeff=0.2728;MQ=35.94;MQ0=65;MQRankSum=-3.626;QD=8.24;ReadPosRankSum=-0.886;VQSLOD=0.5583;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:21:17.57:0,18,153	0/0:3,1:3:3:0,3,26	./.	./.	0/0:17,0:16:17.53:0,18,154	1/1:4,3:6:6.01:60,6,0	1/1:3,4:7:15:152,15,0	1/1:15,7:19:21.02:220,21,0	1/1:7,4:9:15.03:158,15,0	1/1:8,4:9:6.02:66,6,0	0/1:13,3:13:11:112,0,11	0/1:11,2:11:35.83:71,0,36	0/0:16,0:14:9.01:0,9,115	1/1:6,8:11:18.05:199,18,0	0/1:4,3:7:11:110,0,11	1/1:6,4:9:9.02:100,9,0	1/1:19,5:22:32.96:309,33,0	0/0:14,0:9:11.06:0,11,96	1/1:8,4:8:12.02:125,12,0	0/1:7,6:11:17:58,0,17	0/1:6,2:7:14.10:61,0,14	1/1:3,1:2:3.01:33,3,0	0/0:15,0:11:14.65:0,15,115	0/1:10,1:8:18.91:19,0,61	0/1:9,2:8:0:0,0,0	0/1:16,6:20:74.14:169,0,74	1/1:8,8:12:18.04:193,18,0	1/1:11,0:8:2.99:24,3,0
chr10	65523550	.	TGGTTC	T	1279.78	PASS	AB=0.951;AC=19;AF=0.339;AN=56;BaseQRankSum=-1.165;DP=318;FS=6.793;HRun=0;HaplotypeScore=63.7783;InbreedingCoeff=-0.2800;MQ=41.06;MQ0=35;MQRankSum=0.324;QD=6.99;ReadPosRankSum=-0.598;VQSLOD=0.8920;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:28:68.74:0,69,1519	0/0:3,0:3:4.41:0,4,14	0/0:13,0:5:6.76:0,7,51	0/0:9,0:3:5.22:0,5,48	0/0:15,1:16:0.89:0,1,669	0/0:9,0:6:12.82:0,13,38	0/1:6,0:4:29.12:43,0,29	0/1:15,4:17:99:146,0,129	0/1:11,0:9:43.62:207,0,44	0/1:11,0:11:73.89:74,0,165	0/1:10,1:11:99:204,0,121	0/1:8,0:8:30.56:41,0,31	0/0:8,0:8:2.10:0,2,273	0/1:6,0:6:9.36:14,0,9	0/1:5,0:5:26.23:48,0,26	0/1:8,0:6:49.54:50,0,90	0/1:15,1:8:8.24:121,0,8	1/1:10,0:9:2.66:70,3,0	0/1:8,0:7:10.86:11,0,81	0/1:17,0:13:25.79:209,0,26	1/1:7,0:1:3.01:53,3,0	0/0:5,0:4:4.26:0,4,13	0/0:10,0:10:7.60:0,8,401	0/0:16,0:14:21.47:0,21,543	0/1:9,0:9:25:25,0,45	0/0:13,0:9:8.73:0,9,84	0/1:6,1:5:0.07:78,0,0	0/1:18,0:12:12:37,0,12
chr10	65523814	.	G	GGACTCAC	1265.53	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-2.696;DP=689;FS=0.000;HRun=0;HaplotypeScore=183.6187;InbreedingCoeff=0.9817;MQ=84.55;MQ0=0;MQRankSum=-5.848;QD=74.44;ReadPosRankSum=-0.289;VQSLOD=3.4935;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:96.31:0,96,2336	0/0:9,0:9:24.08:0,24,594	0/0:26,0:26:63.11:0,63,1393	0/0:19,0:19:39.08:0,39,836	0/0:17,0:17:39.05:0,39,893	0/0:14,0:14:36.12:0,36,841	0/0:32,0:32:87.29:0,87,2119	0/0:31,0:31:72.24:0,72,1707	0/0:25,0:25:63.19:0,63,1415	0/0:25,0:25:60.21:0,60,1460	0/0:15,0:15:33.10:0,33,774	0/0:38,0:38:93.26:0,93,2188	0/0:36,0:36:96.28:0,96,2176	0/0:29,0:29:84.27:0,84,2026	0/0:29,0:29:87.29:0,87,2098	0/0:23,0:22:66.23:0,66,1639	0/0:31,0:31:90.23:0,90,1994	1/1:5,10:17:36.12:1360,36,0	0/0:25,0:25:54.15:0,54,1136	0/0:22,0:22:48.16:0,48,1167	0/0:45,0:45:99:0,114,2658	0/0:18,0:18:18.06:0,18,424	0/0:20,0:20:42.14:0,42,1023	0/0:24,0:24:66.17:0,66,1542	0/0:23,0:23:54.17:0,54,1258	0/0:24,0:23:51.15:0,51,1121	0/0:28,0:28:75.19:0,75,1629	0/0:6,0:6:18.06:0,18,424
chr10	65524115	.	GGAGCGGTTTCTAAGGAAAGAGGTAAGCCACGGGGA	G	1017.31	PASS	AC=24;AF=0.600;AN=40;BaseQRankSum=0.220;DP=597;FS=8.646;HRun=0;HaplotypeScore=490.4742;InbreedingCoeff=0.5151;MQ=77.02;MQ0=1;MQRankSum=0.324;QD=4.15;ReadPosRankSum=4.172;VQSLOD=-0.2396;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:21.05:0,21,1324	./.	./.	./.	0/0:17,0:17:9.03:0,9,490	./.	./.	0/0:20,0:20:0:0,0,0	1/1:26,0:25:3.01:97,3,0	./.	1/1:12,0:12:6.01:65,6,0	1/1:38,0:38:6:106,6,0	0/0:17,0:17:9.03:0,9,616	1/1:26,0:26:6.02:236,6,0	1/1:23,0:23:3.01:64,3,0	1/1:16,0:16:3.01:64,3,0	0/0:31,0:31:1.25:0,1,3	0/0:22,0:22:1.25:0,1,3	1/1:25,0:25:2.99:24,3,0	1/1:15,0:15:2.99:23,3,0	./.	0/0:18,7:25:6.70:0,7,16	./.	0/0:36,0:36:18.02:0,18,1184	1/1:25,0:24:1.21:20,1,0	1/1:15,6:21:15:297,15,0	1/1:16,0:16:6.02:132,6,0	1/1:2,0:2:2.99:24,3,0
chr10	65524650	.	AG	A	4380.37	PASS	AB=0.900;AC=43;AF=0.796;AN=54;BaseQRankSum=3.557;DP=435;FS=3.298;HRun=1;HaplotypeScore=68.8785;InbreedingCoeff=0.8038;MQ=54.43;MQ0=12;MQRankSum=-5.851;QD=15.37;ReadPosRankSum=-5.902;VQSLOD=2.4594;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,1:48:45.88:0,46,1025	1/1:0,2:2:6.01:66,6,0	./.	0/1:16,2:7:18.52:19,0,33	0/0:23,0:23:26.62:0,27,491	1/1:1,14:14:20.95:206,21,0	1/1:8,2:10:27.40:230,27,0	1/1:14,7:20:40.47:357,40,0	1/1:11,2:13:33.58:270,34,0	1/1:22,0:22:46.07:355,46,0	1/1:20,3:23:36.37:320,36,0	1/1:2,2:4:11.84:93,12,0	0/0:17,0:17:31.91:0,32,424	1/1:12,1:13:36.54:297,37,0	1/1:3,0:3:6.85:48,7,0	1/1:1,5:6:5.37:36,5,0	1/1:13,6:19:38.44:245,38,0	1/1:16,0:16:17.89:146,18,0	1/1:4,2:6:14.57:130,15,0	1/1:9,1:10:12.01:108,12,0	1/1:5,3:8:13.71:97,14,0	1/1:12,4:16:39.50:283,40,0	0/0:21,0:21:45.23:0,45,469	0/0:20,0:20:51.48:0,51,594	1/1:19,2:20:46.36:339,46,0	1/1:14,2:16:37.43:308,37,0	1/1:13,1:13:35.77:274,36,0	1/1:8,1:9:22.30:153,22,0
chr10	65524657	.	AAAAAAAAG	A	2375.85	PASS	AB=0.968;AC=26;AF=0.464;AN=56;BaseQRankSum=7.080;DP=485;FS=11.599;HRun=0;HaplotypeScore=135.1621;InbreedingCoeff=0.2665;MQ=56.17;MQ0=13;MQRankSum=-7.779;QD=10.51;ReadPosRankSum=2.232;VQSLOD=2.0081;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,144,4800	1/1:2,0:2:0.16:67,0,0	0/0:26,0:4:12.01:0,12,137	0/0:22,0:9:18.76:0,19,326	0/0:22,0:22:53.59:0,54,1779	1/1:19,1:19:3.34:435,3,0	1/1:7,0:7:12.02:239,12,0	0/0:21,0:20:30.18:0,30,618	0/1:13,0:13:49.31:245,0,49	0/0:20,0:20:52.37:0,52,1693	0/0:24,0:24:59.63:0,60,1627	0/1:8,1:9:16.07:112,0,16	0/0:16,0:16:40.64:0,41,1411	1/1:8,1:9:7.16:84,7,0	0/0:13,0:13:3.42:0,3,34	1/1:7,0:7:5.35:86,5,0	0/1:30,2:32:13.02:340,0,13	1/1:16,0:16:17.88:189,18,0	1/1:13,0:13:9.97:104,10,0	1/1:12,0:12:3.94:74,4,0	0/1:8,1:9:30.53:31,0,42	0/1:13,0:13:11.46:189,0,11	0/0:22,0:22:51.18:0,51,1850	0/0:22,0:22:61.41:0,61,2119	0/1:22,0:21:74.60:75,0,102	1/1:16,0:16:2.89:161,3,0	0/1:14,0:13:79.34:83,0,79	0/1:12,0:12:8.94:46,0,9
chr10	65524658	.	AAAAAAAG	A	2006.46	PASS	AB=0.905;AC=30;AF=0.536;AN=56;BaseQRankSum=7.790;DP=491;FS=1.512;HRun=0;HaplotypeScore=129.3783;InbreedingCoeff=0.5232;MQ=55.93;MQ0=13;MQRankSum=-7.341;QD=8.33;ReadPosRankSum=-2.102;VQSLOD=1.9286;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,147,4209	0/1:1,1:2:3.26:49,0,3	0/0:28,0:6:14.70:0,15,129	0/0:22,0:9:18.01:0,18,286	0/0:22,0:22:57.51:0,58,1589	1/1:15,5:19:26.95:371,27,0	1/1:5,1:6:11.25:171,11,0	0/0:22,0:21:31.09:0,31,568	0/1:12,1:13:1.99:176,0,2	0/0:21,0:21:55.01:0,55,1495	0/0:24,0:24:59.77:0,60,1465	1/1:8,1:9:6.14:99,6,0	0/0:16,0:16:40.35:0,40,1252	1/1:8,0:8:6.27:65,6,0	0/1:13,0:13:7.79:12,0,8	1/1:7,0:7:5.02:63,5,0	1/1:32,0:32:18.33:300,18,0	1/1:17,0:17:1.63:143,2,0	1/1:13,0:13:15.01:117,15,0	1/1:11,1:12:6.93:78,7,0	0/1:8,1:9:22.89:42,0,23	1/1:11,2:13:2.63:110,3,0	0/0:22,0:22:51.06:0,51,1621	0/0:21,0:21:61.44:0,61,1876	0/1:24,0:22:26.19:85,0,26	1/1:15,2:17:14.93:208,15,0	0/1:14,1:13:4.78:65,0,5	1/1:11,0:11:11.79:49,12,0
chr10	65524664	.	AG	A	3747.35	PASS	AB=1.000;AC=36;AF=0.643;AN=56;BaseQRankSum=3.324;DP=496;FS=5.095;HRun=1;HaplotypeScore=76.2917;InbreedingCoeff=0.8157;MQ=56.88;MQ0=13;MQRankSum=-7.578;QD=13.98;ReadPosRankSum=-8.079;VQSLOD=-0.2693;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:56:99:0,112,1325	1/1:4,0:4:10.21:76,10,0	0/0:30,1:8:5.87:0,6,70	0/1:22,0:10:6.63:7,0,84	0/0:22,0:22:53.03:0,53,439	1/1:20,1:20:43.91:342,44,0	1/1:3,1:4:11.84:81,12,0	0/1:25,0:24:48.87:49,0,242	1/1:10,1:11:30.87:216,31,0	0/0:19,0:19:38.43:0,38,388	0/0:22,0:22:26.03:0,26,372	1/1:8,0:8:22.73:171,23,0	0/0:14,0:14:18.65:0,19,333	1/1:7,0:7:20.42:139,20,0	1/1:14,0:14:26.21:297,26,0	1/1:6,1:7:11.68:78,12,0	1/1:31,2:33:65.56:453,66,0	0/0:20,0:20:19.17:0,19,101	1/1:2,10:12:32.78:243,33,0	1/1:1,10:11:14.86:103,15,0	1/1:10,0:10:23.77:171,24,0	1/1:14,0:14:14.39:196,14,0	0/0:21,0:21:43.11:0,43,468	0/0:23,0:23:63.26:0,63,590	1/1:23,1:23:50.17:387,50,0	1/1:4,15:19:50.27:365,50,0	1/1:15,0:13:17.28:244,17,0	1/1:7,0:7:20.28:130,20,0
chr10	65524668	.	AAAAAAG	A	271.50	PASS	AB=0.980;AC=11;AF=0.196;AN=56;BaseQRankSum=8.361;DP=511;FS=29.228;HRun=0;HaplotypeScore=132.4495;InbreedingCoeff=-0.0476;MQ=58.33;MQ0=13;MQRankSum=-7.278;QD=2.07;ReadPosRankSum=3.889;VQSLOD=0.9927;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,153,4542	0/1:4,0:4:6.91:7,0,15	0/0:30,0:8:14.64:0,15,304	0/0:24,0:12:24.81:0,25,346	0/0:22,0:22:51:0,51,1501	0/1:21,1:21:92.48:92,0,280	1/1:3,1:4:9.02:104,9,0	0/0:26,0:25:8.57:0,9,1042	0/1:10,1:11:70.73:71,0,136	0/0:19,0:19:54.66:0,55,1735	0/0:24,0:24:57.14:0,57,1560	0/1:9,0:9:26.52:27,0,151	0/0:14,0:14:36.07:0,36,1172	0/1:8,0:8:23.46:23,0,111	0/0:15,0:15:30.20:0,30,326	0/1:9,0:9:24.23:24,0,104	0/1:34,2:36:54.73:55,0,480	0/0:21,0:20:22.79:0,23,278	0/0:13,0:13:13.26:0,13,207	0/1:11,0:11:6.85:7,0,83	0/0:10,0:10:15:0,15,179	0/0:15,0:15:3.60:0,4,181	0/0:20,0:20:50.84:0,51,1596	0/0:24,0:24:63.69:0,64,1937	0/0:25,0:24:26.74:0,27,321	0/1:17,0:17:3.71:4,0,149	0/0:16,0:14:2.57:0,3,264	0/0:7,0:7:11.83:0,12,100
chr10	65525372	.	T	TTTTTC	14765.10	PASS	AB=0.865;AC=43;AF=0.768;AN=56;BaseQRankSum=-8.005;DP=693;FS=0.912;HRun=0;HaplotypeScore=113.9774;InbreedingCoeff=0.6850;MQ=59.08;MQ0=14;MQRankSum=-3.034;QD=26.51;ReadPosRankSum=0.025;VQSLOD=4.1757;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:81.02:0,81,1205	1/1:3,7:11:12.03:340,12,0	1/1:32,0:12:2.51:6,3,0	0/1:37,0:16:5.88:6,0,31	0/0:19,0:19:48.11:0,48,823	1/1:6,14:18:33.11:908,33,0	1/1:6,8:14:18.06:496,18,0	0/1:34,0:31:42.40:127,0,42	1/1:9,6:15:12.04:339,12,0	0/1:8,0:24:4.95:760,0,5	1/1:6,0:20:27.09:594,27,0	1/1:4,15:17:24.08:681,24,0	0/0:20,0:20:42.14:0,42,781	1/1:13,15:27:24.08:679,24,0	1/1:9,17:26:27.09:766,27,0	1/1:12,19:30:33.11:937,33,0	1/1:10,22:32:48.16:1363,48,0	1/1:9,14:22:27.09:766,27,0	1/1:16,11:27:32.16:857,32,0	1/1:10,18:26:27.03:700,27,0	1/1:3,7:10:12.04:330,12,0	1/1:9,15:25:30.10:821,30,0	0/0:23,0:23:34.96:0,35,631	0/0:37,0:37:73:0,73,1503	1/1:11,15:25:22.23:915,22,0	1/1:10,18:28:7.16:887,7,0	1/1:10,18:28:42.14:1147,42,0	1/1:3,7:10:12.04:341,12,0
chr10	65525392	.	C	CTTT	5834.68	PASS	AB=1.000;AC=24;AF=0.429;AN=56;BaseQRankSum=13.602;DP=697;FS=11.251;HRun=7;HaplotypeScore=119.1168;InbreedingCoeff=-0.4325;MQ=53.72;MQ0=16;MQRankSum=-1.934;QD=11.24;ReadPosRankSum=7.673;VQSLOD=0.5266;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:42:71.92:0,72,976	0/1:9,0:9:25.46:118,0,25	0/1:16,0:4:0:0,0,0	0/0:23,0:9:2.59:0,3,10	0/0:26,0:25:60.15:0,60,779	0/1:27,0:25:99:276,0,343	0/1:17,0:17:99:167,0,165	1/1:8,22:28:60.11:933,60,0	0/1:12,0:11:99:104,0,143	0/1:24,0:23:99:206,0,378	0/1:17,0:17:69.78:263,0,70	0/1:21,0:19:99:231,0,126	0/0:22,0:22:63.15:0,63,819	0/1:31,0:30:99:260,0,181	0/1:26,0:25:99:258,0,145	0/1:30,0:29:99:312,0,211	0/1:40,0:37:99:464,0,158	0/1:27,0:25:99:261,0,105	0/1:24,0:24:99:266,0,165	0/1:28,0:25:99:229,0,147	0/1:12,0:12:81.83:118,0,82	0/1:25,0:24:99:263,0,121	0/0:21,0:20:38.87:0,39,531	0/0:39,0:39:95.22:0,95,1290	0/1:31,0:28:99:309,0,176	0/1:32,0:31:99:307,0,318	0/1:33,0:33:99:355,0,325	1/1:7,0:7:12.03:133,12,0
chr10	65527075	.	CT	C	9366.78	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=8.813;DP=629;FS=10.530;HRun=9;HaplotypeScore=68.7448;InbreedingCoeff=0.9680;MQ=76.66;MQ0=0;MQRankSum=0.891;QD=22.57;ReadPosRankSum=2.463;VQSLOD=5.3516;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,111,1272	1/1:2,9:12:26.05:226,26,0	0/0:27,0:27:57.01:0,57,593	0/0:18,1:16:2.76:0,3,241	0/0:31,0:32:75.04:0,75,835	1/1:3,18:21:54.02:494,54,0	1/1:3,18:21:42.02:384,42,0	0/0:32,0:32:66.16:0,66,735	1/1:2,21:23:60.03:549,60,0	1/1:5,25:30:72.02:658,72,0	1/1:2,10:12:24:220,24,0	1/1:3,15:18:45.02:412,45,0	0/0:21,0:21:60.18:0,60,692	1/1:2,12:14:36.02:330,36,0	1/1:1,20:21:57.03:522,57,0	1/1:3,17:21:50.06:445,50,0	1/1:2,29:31:81.04:741,81,0	1/1:2,24:26:69.03:631,69,0	1/1:2,15:17:45.02:412,45,0	1/1:3,20:23:63.03:576,63,0	1/1:3,24:27:63.02:577,63,0	1/1:1,17:18:45.01:412,45,0	0/0:20,0:20:48.14:0,48,554	0/0:20,0:20:57.17:0,57,658	1/1:1,16:17:39.01:357,39,0	1/1:3,26:29:78.02:708,78,0	1/1:4,21:25:57.02:522,57,0	1/1:1,8:9:21.01:192,21,0
chr10	65527471	.	T	TACAC	3099.95	PASS	AB=0.697;AC=38;AF=0.731;AN=52;BaseQRankSum=0.826;DP=618;FS=6.668;HRun=0;HaplotypeScore=130.1724;InbreedingCoeff=0.5641;MQ=62.04;MQ0=12;MQRankSum=-0.619;QD=7.47;ReadPosRankSum=-0.799;VQSLOD=2.2085;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:43:44.25:0,44,665	1/1:4,1:8:3.01:52,3,0	./.	./.	0/0:25,0:25:0.95:0,1,305	1/1:13,12:23:9.03:212,9,0	1/1:21,7:28:3.48:72,3,0	1/1:20,0:16:2.98:21,3,0	1/1:20,0:21:10.09:107,10,0	1/1:21,0:19:14.45:172,14,0	0/1:5,0:10:0:0,0,0	1/1:8,11:20:17.99:371,18,0	0/0:19,0:19:14.71:0,15,233	1/1:11,7:18:15.05:336,15,0	1/1:15,8:25:6.02:140,6,0	1/1:13,5:21:11.78:206,12,0	1/1:20,14:36:17.80:341,18,0	0/0:25,0:25:33.07:0,33,467	1/1:12,0:12:6.47:74,6,0	1/1:18,9:28:6.02:141,6,0	0/1:25,1:40:29.20:179,0,29	1/1:10,4:15:5.99:129,6,0	0/0:23,0:23:17.63:0,18,227	0/0:35,0:37:5.96:0,6,518	1/1:10,11:21:3.01:71,3,0	1/1:8,6:16:18.48:265,18,0	1/1:12,11:24:17.46:304,17,0	1/1:0,5:5:3.01:71,3,0
chr10	65529103	.	G	GAA	892.62	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=2.309;DP=511;FS=3.855;HRun=9;HaplotypeScore=90.2949;InbreedingCoeff=0.9691;MQ=66.42;MQ0=6;MQRankSum=0.370;QD=17.50;ReadPosRankSum=-2.470;VQSLOD=1.9219;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:90.20:0,90,957	0/0:5,0:5:15.04:0,15,160	0/0:18,0:10:13.70:0,14,215	0/0:24,0:16:37.93:0,38,320	0/0:20,0:20:47.72:0,48,493	0/0:21,0:21:57.10:0,57,587	0/0:15,0:14:33.04:0,33,350	1/1:7,19:28:65.34:877,65,0	0/0:13,0:13:36.07:0,36,382	0/0:18,0:18:51.13:0,51,543	0/0:29,0:29:78.16:0,78,830	0/0:16,0:16:39.08:0,39,405	0/0:11,0:11:33.08:0,33,350	0/0:8,0:8:15.03:0,15,160	0/0:15,0:14:33.08:0,33,351	0/0:12,0:12:23.51:0,24,254	0/0:38,0:38:93.39:0,93,1045	1/1:3,0:21:39.93:137,40,0	0/0:13,0:12:33.08:0,33,351	0/0:16,0:16:42.09:0,42,438	0/0:9,0:9:21.05:0,21,223	0/0:14,0:14:39.09:0,39,415	0/0:19,0:18:48.09:0,48,502	0/0:13,0:13:36.07:0,36,374	0/0:13,0:13:33.08:0,33,351	0/0:29,0:29:81.15:0,81,845	0/0:23,0:22:66.12:0,66,684	0/0:13,0:13:36.07:0,36,383
chr10	65531319	.	GC	G	814.21	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=7.310;DP=513;FS=2.632;HRun=3;HaplotypeScore=48.6767;InbreedingCoeff=0.9543;MQ=77.72;MQ0=0;MQRankSum=-0.565;QD=26.26;ReadPosRankSum=-0.825;VQSLOD=2.6230;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:90.28:0,90,1272	0/0:2,0:2:6.02:0,6,86	0/0:9,0:9:24.02:0,24,286	0/0:12,0:12:24.79:0,25,295	0/0:11,0:11:30.10:0,30,432	0/0:20,0:20:60.19:0,60,845	0/0:24,0:24:66.21:0,66,928	0/0:22,0:22:60.19:0,60,848	0/0:21,0:21:63.21:0,63,901	1/1:0,15:15:42.12:508,42,0	1/1:1,8:9:18.04:223,18,0	0/0:21,0:21:60.20:0,60,863	0/0:19,0:19:57.15:0,57,762	0/0:24,0:24:72.24:0,72,1037	0/0:9,0:9:27.09:0,27,389	1/1:0,7:7:18.06:223,18,0	0/0:38,0:38:99:0,108,1532	0/0:32,0:32:96.31:0,96,1364	0/0:16,0:16:39.12:0,39,543	0/0:16,0:16:45.15:0,45,644	0/0:64,0:64:99:0,190,2630	0/0:12,0:12:36.12:0,36,512	0/0:10,0:10:27.09:0,27,388	0/0:21,0:21:60.20:0,60,864	0/0:12,0:12:36.12:0,36,517	0/0:17,0:17:48.15:0,48,672	0/0:13,0:13:39.13:0,39,557	0/0:7,0:7:21.07:0,21,302
chr10	65531857	.	GT	G	190.58	PASS	AB=0.500;AC=14;AF=0.875;AN=16;DP=10;FS=0.000;HRun=1;HaplotypeScore=29.1039;MQ=29.00;MQ0=0;QD=19.06;VQSLOD=3.6597;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	./.	./.	1/1:0,3:3:5.92:73,6,0	./.	1/1:0,1:1:3.01:39,3,0	./.	./.	./.	1/1:0,1:1:3.01:39,3,0	1/1:0,1:1:3.01:31,3,0	1/1:0,1:1:3.01:39,3,0	1/1:0,1:1:3.01:39,3,0	./.	./.	./.	./.	0/1:0,1:1:0:0,0,0	0/1:0,1:1:0:0,0,0	./.	./.	./.	./.	./.	./.
chr10	65531914	.	GC	G	254.85	PASS	AC=22;AF=0.917;AN=24;DP=19;FS=0.000;HRun=3;HaplotypeScore=34.5777;InbreedingCoeff=0.0429;MQ=31.40;MQ0=0;QD=14.16;VQSLOD=2.3327;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,2:2:5.97:45,6,0	./.	./.	./.	./.	./.	1/1:1,3:4:5.99:47,6,0	1/1:0,1:1:2.98:22,3,0	./.	1/1:0,1:1:2.99:23,3,0	./.	./.	1/1:0,1:1:2.98:22,3,0	1/1:0,1:1:3:25,3,0	1/1:0,2:2:5.99:48,6,0	1/1:0,2:2:5.99:49,6,0	./.	./.	./.	./.	./.	1/1:0,1:1:2.92:17,3,0	./.	1/1:0,1:1:2.22:7,2,0	0/0:0,1:1:0:0,0,0	1/1:1,1:2:2.99:23,3,0	./.	./.
chr10	65534521	.	AAC	A	7429.69	PASS	AB=0.853;AC=41;AF=0.732;AN=56;BaseQRankSum=7.672;DP=690;FS=0.000;HRun=0;HaplotypeScore=99.9790;InbreedingCoeff=0.3345;MQ=61.71;MQ0=17;MQRankSum=1.386;QD=13.53;ReadPosRankSum=2.853;VQSLOD=4.6935;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:27,2:29:11.45:11,0,719	1/1:6,2:8:12.03:136,12,0	0/0:42,0:20:3.01:0,3,44	0/0:45,0:25:3.89:0,4,29	0/1:23,0:24:3.42:3,0,506	1/1:7,8:15:25.11:243,25,0	1/1:6,11:17:26.43:288,26,0	0/0:24,0:33:34.72:0,35,305	1/1:6,21:28:53.99:597,54,0	1/1:12,11:23:7.62:498,8,0	1/1:11,13:25:42.11:469,42,0	1/1:9,11:21:36.10:412,36,0	0/1:22,1:23:12.09:12,0,356	1/1:5,11:17:35.93:388,36,0	1/1:9,11:21:38.78:405,39,0	1/1:22,18:43:58.76:672,59,0	1/1:12,9:23:35.73:357,36,0	0/1:12,1:14:7.27:7,0,311	1/1:8,8:17:21.34:203,21,0	1/1:12,18:31:39.73:515,40,0	1/1:9,22:31:4.76:558,5,0	1/1:3,10:15:32.76:337,33,0	0/0:19,0:19:36.12:0,36,529	0/1:38,5:43:81.09:81,0,1000	1/1:6,13:22:47.63:488,48,0	0/1:9,12:20:11.29:309,0,11	0/1:9,9:19:13.41:290,0,13	1/1:5,6:11:14.71:149,15,0
chr10	65534550	.	ACT	A	1354.81	PASS	AB=0.983;AC=20;AF=0.357;AN=56;BaseQRankSum=8.963;DP=650;FS=15.295;HRun=0;HaplotypeScore=122.3918;InbreedingCoeff=-0.3765;MQ=59.49;MQ0=14;MQRankSum=0.710;QD=3.39;ReadPosRankSum=6.048;VQSLOD=1.2472;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:53.43:0,53,1071	0/1:6,0:6:5.58:33,0,6	0/0:37,2:14:25:0,25,293	0/0:41,0:16:4.18:0,4,180	0/0:19,0:19:33.50:0,33,667	0/1:14,0:13:54.41:54,0,99	0/1:17,0:17:34.95:35,0,97	0/0:28,0:27:67.47:0,67,674	0/1:30,0:30:97.05:97,0,138	0/1:24,1:24:99:107,0,155	0/1:26,1:27:99:110,0,171	0/1:15,0:15:14.04:106,0,14	0/0:19,0:19:17.05:0,17,513	0/1:16,2:18:64.85:141,0,65	0/1:24,0:23:79.44:79,0,102	0/1:37,0:37:99:103,0,223	0/1:14,0:14:7.71:58,0,8	0/0:12,0:12:17.88:0,18,400	0/1:23,0:22:22.53:23,0,265	1/1:28,0:27:6.72:131,7,0	0/1:40,1:39:99:136,0,261	0/1:13,0:13:25.35:69,0,25	0/0:19,0:19:53.93:0,54,717	0/0:43,0:42:27.94:0,28,1422	0/1:22,0:22:60.46:84,0,60	0/1:24,0:22:19.17:19,0,256	0/1:14,0:14:70.67:71,0,75	0/1:7,1:8:8.33:61,0,8
chr10	65534579	.	TCC	T	1914.66	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=-0.405;DP=546;FS=7.047;HRun=9;HaplotypeScore=106.1803;InbreedingCoeff=0.7311;MQ=73.09;MQ0=0;MQRankSum=-0.532;QD=18.41;ReadPosRankSum=4.255;VQSLOD=1.8476;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:36:82.61:0,83,1280	0/0:4,0:4:11.95:0,12,117	0/0:23,0:23:7.95:0,8,551	0/0:20,0:17:17.93:0,18,235	0/0:16,0:16:44.74:0,45,691	0/0:19,0:19:42:0,42,507	0/0:18,0:18:10.62:0,11,336	0/1:23,0:23:29.45:29,0,279	0/0:27,1:28:13.30:0,13,522	1/1:8,12:20:44.89:457,45,0	1/1:8,20:28:66.09:726,66,0	0/0:15,0:15:35.84:0,36,310	0/0:17,0:17:51.13:0,51,752	0/0:12,0:12:27.03:0,27,342	0/0:24,0:24:66.03:0,66,766	1/1:6,27:33:75.18:849,75,0	0/0:9,0:9:24.03:0,24,296	0/0:13,0:13:30.01:0,30,407	0/0:14,0:14:33.08:0,33,476	0/0:18,0:18:29.38:0,29,349	0/0:34,0:34:66.50:0,67,750	0/0:11,0:11:26.94:0,27,298	0/0:20,0:20:60.19:0,60,939	0/0:37,0:38:99:0,105,1451	0/0:14,0:14:29.46:0,29,310	0/0:17,1:18:0.96:0,1,301	0/0:10,0:10:23.94:0,24,274	0/0:9,0:9:20.94:0,21,213
chr10	65534788	.	C	CTCCT	4080.82	PASS	AB=0.795;AC=18;AF=0.360;AN=50;BaseQRankSum=-7.500;DP=647;FS=6.077;HRun=0;HaplotypeScore=119.8367;InbreedingCoeff=0.6120;MQ=66.01;MQ0=3;MQRankSum=-0.438;QD=17.29;ReadPosRankSum=-3.058;VQSLOD=2.4198;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:33:31.85:0,32,285	1/1:7,0:7:3.48:45,3,0	./.	./.	0/0:21,0:37:29.05:0,29,274	1/1:15,12:29:24.08:558,24,0	0/1:17,6:26:21.65:406,0,22	./.	0/1:19,7:26:27.63:330,0,28	0/0:30,0:29:27.08:0,27,392	0/0:28,0:28:42.09:0,42,619	0/0:14,0:14:18.05:0,18,253	0/0:23,0:23:27.08:0,27,391	0/0:21,0:21:48.16:0,48,724	0/0:27,0:27:54.17:0,54,804	0/0:24,0:24:42.14:0,42,630	0/1:21,11:33:7.10:915,0,7	0/0:8,0:17:10.08:0,10,195	0/1:9,1:11:18.93:130,0,19	1/1:19,6:26:25.65:427,26,0	1/1:11,6:17:12.51:280,13,0	0/0:21,0:21:33.11:0,33,503	0/0:27,0:27:32.95:0,33,499	0/0:18,0:19:27.07:0,27,371	0/0:29,0:29:33.11:0,33,493	1/1:20,3:23:15.52:343,16,0	1/1:12,4:17:21.07:437,21,0	1/1:16,5:21:9.03:209,9,0
chr10	65535617	.	CT	C	855.18	PASS	AB=0.758;AC=29;AF=0.518;AN=56;BaseQRankSum=-2.256;DP=328;FS=16.015;HRun=16;HaplotypeScore=46.7512;InbreedingCoeff=0.2030;MQ=72.23;MQ0=10;MQRankSum=3.316;QD=4.50;ReadPosRankSum=4.020;VQSLOD=0.1234;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:10,4:15:51.11:51,0,149	1/1:0,3:3:8.83:54,9,0	0/0:29,0:13:6.06:0,6,34	0/0:24,0:12:4.78:0,5,19	0/1:12,1:12:2.82:3,0,80	1/1:4,7:14:12.80:126,13,0	0/1:9,6:14:16.86:54,0,17	0/0:28,2:33:23.43:0,23,351	0/1:4,1:5:6.03:6,0,64	0/0:10,0:9:8.95:0,9,69	0/1:11,1:12:3.03:3,0,186	1/1:1,3:4:2.87:18,3,0	0/0:8,0:8:9.42:0,9,70	1/1:3,0:3:2.75:13,3,0	1/1:0,6:8:9.45:47,9,0	0/0:9,1:9:0.59:0,1,88	0/1:6,16:21:34.59:96,0,35	1/1:4,7:11:12.85:64,13,0	0/1:8,7:15:23.57:97,0,24	1/1:1,3:4:8.82:54,9,0	0/1:5,5:10:26.26:54,0,26	0/0:3,1:4:2.98:0,3,21	0/0:6,0:5:5.99:0,6,50	0/0:9,0:12:19.83:0,20,195	1/1:1,4:5:5.85:36,6,0	1/1:2,5:7:11.70:72,12,0	0/1:8,5:12:51.70:52,0,54	1/1:0,7:8:22.63:132,23,0
chr10	65535638	.	CT	C	336.12	PASS	AB=0.929;AC=9;AF=0.161;AN=56;BaseQRankSum=0.931;DP=343;FS=1.907;HRun=9;HaplotypeScore=46.3143;InbreedingCoeff=0.6812;MQ=46.24;MQ0=18;MQRankSum=-0.424;QD=6.11;ReadPosRankSum=0.862;VQSLOD=0.1814;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:21:35.65:0,36,413	0/0:5,0:5:15.04:0,15,173	1/1:10,0:3:1.55:4,2,0	0/0:4,0:2:2.22:0,2,7	0/0:19,0:17:33.09:0,33,371	0/0:15,0:15:27:0,27,294	0/0:18,0:14:27:0,27,282	0/0:25,1:24:14.59:0,15,384	0/0:7,0:6:15.03:0,15,164	1/1:1,6:6:18.01:165,18,0	1/1:3,10:13:17.99:165,18,0	0/0:2,0:2:3.01:0,3,35	0/0:9,0:9:12.88:0,13,117	0/0:7,0:7:15.93:0,16,175	0/0:9,0:9:14.95:0,15,144	1/1:8,4:11:14.80:135,15,0	0/0:34,0:29:53.91:0,54,544	0/1:12,1:11:11.94:12,0,124	0/0:17,0:14:18.03:0,18,190	0/0:7,0:7:18.05:0,18,208	0/0:10,0:10:15.03:0,15,163	0/0:3,0:3:6.02:0,6,69	0/0:9,0:7:14.93:0,15,145	0/0:14,0:14:32.56:0,33,335	0/0:8,0:8:14.94:0,15,172	0/0:13,0:13:36.10:0,36,408	0/0:13,0:12:21.05:0,21,231	0/0:13,0:13:27.08:0,27,311
chr10	65536307	.	GA	G	267.04	PASS	AB=0.966;AC=3;AF=0.054;AN=56;BaseQRankSum=4.177;DP=658;FS=2.001;HRun=10;HaplotypeScore=73.4222;InbreedingCoeff=0.6958;MQ=68.87;MQ0=6;MQRankSum=-2.004;QD=5.93;ReadPosRankSum=0.471;VQSLOD=1.5008;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:76.88:0,77,807	0/0:8,0:8:18.03:0,18,187	0/0:41,0:14:23.21:0,23,150	0/1:27,1:16:5.79:6,0,95	0/0:28,1:30:51.95:0,52,754	0/0:22,0:22:60.14:0,60,651	0/0:18,0:18:48.10:0,48,513	0/0:23,0:25:65.89:0,66,640	0/0:19,0:19:54.07:0,54,552	0/0:24,0:24:56.21:0,56,429	0/0:19,0:19:44.86:0,45,364	0/0:31,0:31:75.11:0,75,781	0/0:22,0:22:49.85:0,50,502	0/0:24,0:24:63.10:0,63,652	0/0:29,0:29:62.52:0,63,769	0/0:25,0:25:56.87:0,57,458	0/0:31,0:31:90.13:0,90,929	1/1:1,16:17:41.97:361,42,0	0/0:28,0:28:60.10:0,60,618	0/0:18,0:18:39.09:0,39,422	0/0:15,0:15:42.03:0,42,419	0/0:15,0:15:36.10:0,36,398	0/0:20,0:20:50.54:0,51,553	0/0:23,0:23:51.04:0,51,510	0/0:28,0:28:69.14:0,69,736	0/0:23,0:23:60.11:0,60,629	0/0:28,0:28:69.07:0,69,700	0/0:16,0:17:41.94:0,42,438
chr10	65536317	.	A	AT	1281.89	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=2.714;DP=659;FS=30.290;HRun=10;HaplotypeScore=73.0165;InbreedingCoeff=0.9224;MQ=71.63;MQ0=7;MQRankSum=1.747;QD=19.42;ReadPosRankSum=0.233;VQSLOD=2.2914;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:71.83:0,72,582	0/0:9,0:9:20.93:0,21,165	0/0:53,0:22:19.29:0,19,157	0/0:31,0:17:1.45:0,1,60	0/0:31,0:31:69.13:0,69,589	0/0:20,0:20:50.91:0,51,417	0/0:18,0:18:47.91:0,48,388	0/0:30,0:30:59.42:0,59,485	0/0:20,0:20:53.63:0,54,424	1/1:4,19:24:59.08:546,59,0	1/1:2,15:17:38.84:367,39,0	0/0:30,0:30:65.84:0,66,533	0/0:18,0:18:35.79:0,36,280	0/0:28,0:28:45.88:0,46,439	0/0:30,0:30:77.20:0,77,612	1/1:2,23:25:29.59:511,30,0	0/0:30,0:30:80.84:0,81,653	0/0:21,0:21:49.47:0,49,285	0/0:23,0:23:40.98:0,41,317	0/0:15,0:15:32.92:0,33,267	0/0:18,0:18:41.38:0,41,318	0/0:15,0:15:38.90:0,39,313	0/0:19,0:20:55.13:0,55,421	0/0:18,0:18:41.91:0,42,340	0/0:23,0:23:56.90:0,57,466	0/0:24,1:25:28.21:0,28,424	0/0:25,0:25:53.88:0,54,435	0/0:15,0:15:28.12:0,28,263
chr10	65536894	.	G	GTGT	22239.52	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=-12.885;DP=547;FS=0.805;HRun=0;HaplotypeScore=66.4723;InbreedingCoeff=0.9872;MQ=76.08;MQ0=0;MQRankSum=-5.604;QD=53.59;ReadPosRankSum=2.784;VQSLOD=6.9822;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:51.13:0,51,781	1/1:0,8:8:24.08:536,24,0	0/0:15,0:15:39.13:0,39,636	0/0:14,0:12:33:0,33,483	0/0:28,0:28:84.29:0,84,1371	1/1:2,19:21:54.10:1156,54,0	1/1:4,14:18:39.13:870,39,0	1/1:11,34:46:99:2530,117,0	1/1:5,18:24:45.15:1002,45,0	1/1:0,28:29:84.24:1765,84,0	1/1:2,17:20:53.93:1012,54,0	1/1:3,14:17:30.10:669,30,0	0/0:24,0:24:66.23:0,66,1078	1/1:1,9:11:27.09:602,27,0	1/1:3,13:16:39.13:870,39,0	1/1:2,28:30:81.28:1809,81,0	1/1:3,14:17:39.13:871,39,0	1/1:1,6:7:18.06:402,18,0	1/1:5,8:13:33.11:733,33,0	1/1:4,19:24:60.08:1212,60,0	1/1:2,15:18:37.28:757,37,0	1/1:1,7:9:9.03:200,9,0	0/0:17,0:17:45.13:0,45,701	0/0:13,0:13:33.11:0,33,539	1/1:0,14:15:42.14:938,42,0	1/1:1,26:27:81.28:1779,81,0	1/1:4,25:31:75.26:1657,75,0	1/1:0,14:14:39.13:871,39,0
chr10	65537214	.	A	AT	720.29	PASS	AB=0.867;AC=3;AF=0.054;AN=56;BaseQRankSum=-7.884;DP=622;FS=11.818;HRun=9;HaplotypeScore=57.2461;InbreedingCoeff=0.6362;MQ=74.26;MQ0=1;MQRankSum=-1.875;QD=14.70;ReadPosRankSum=-4.514;VQSLOD=1.2835;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:65.97:0,66,573	0/1:11,2:13:30.37:30,0,224	0/0:15,0:14:29.99:0,30,260	0/0:13,0:12:14.34:0,14,173	0/0:29,1:30:35.79:0,36,540	0/0:23,0:23:65.99:0,66,573	0/0:18,0:18:47.99:0,48,417	1/1:11,25:36:72.19:796,72,0	0/0:20,0:20:56.99:0,57,495	0/0:22,1:23:32.80:0,33,514	0/0:15,0:16:40.99:0,41,341	0/0:20,0:21:62.03:0,62,527	0/0:20,2:22:23.81:0,24,436	0/0:17,0:17:50.99:0,51,443	0/0:27,0:27:50.61:0,51,601	0/0:25,0:25:59.95:0,60,517	0/0:26,0:26:71.97:0,72,625	0/0:18,0:18:44.94:0,45,384	0/0:28,0:28:71.96:0,72,622	0/0:24,0:24:54.44:0,54,470	0/0:10,0:10:23.99:0,24,208	0/0:25,0:25:59.98:0,60,521	0/0:24,0:24:59.97:0,60,521	0/0:18,0:18:44.99:0,45,391	0/0:26,0:26:68.96:0,69,594	0/0:26,0:26:65.97:0,66,570	0/0:30,0:30:86.96:0,87,751	0/0:21,1:22:23.81:0,24,435
chr10	65537741	.	C	CTTTCTTTCT	7589.63	PASS	AB=0.956;AC=36;AF=0.643;AN=56;BaseQRankSum=0.423;DP=534;FS=0.964;HRun=0;HaplotypeScore=151.7581;InbreedingCoeff=0.6075;MQ=61.02;MQ0=15;MQRankSum=-7.468;QD=20.79;ReadPosRankSum=1.244;VQSLOD=3.7087;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:39:73.93:0,74,1523	1/1:1,6:10:7.20:194,7,0	0/0:31,0:10:7.02:0,7,189	0/1:27,0:12:0.09:0,0,143	0/0:17,0:25:51.65:0,52,891	1/1:12,10:28:14.55:397,15,0	1/1:7,0:9:9.03:255,9,0	0/1:25,0:22:32:49,0,32	1/1:13,0:13:20.05:336,20,0	0/1:18,0:19:46.29:47,0,46	0/0:20,0:20:2.25:0,2,92	1/1:10,0:11:17.52:279,18,0	0/0:12,0:13:29.99:0,30,500	1/1:13,0:16:27.05:401,27,0	1/1:9,0:16:27.03:466,27,0	0/0:18,0:18:10.61:0,11,92	1/1:11,11:31:14.07:631,14,0	0/1:12,0:12:14.48:152,0,14	1/1:27,0:29:63.81:908,64,0	1/1:7,9:16:20.26:564,20,0	1/1:4,4:7:3.01:134,3,0	1/1:9,0:9:21.05:304,21,0	0/0:8,0:9:11.80:0,12,213	0/0:11,0:10:19.91:0,20,321	1/1:3,7:16:5.95:125,6,0	1/1:5,12:19:26.66:1016,27,0	1/1:10,16:31:26.13:695,26,0	1/1:1,5:8:15.03:637,15,0
chr10	65537742	.	T	TTTC	4003.69	PASS	AB=0.996;AC=34;AF=0.607;AN=56;BaseQRankSum=3.695;DP=530;FS=6.717;HRun=0;HaplotypeScore=107.2843;InbreedingCoeff=0.2514;MQ=60.78;MQ0=17;MQRankSum=-2.853;QD=10.82;ReadPosRankSum=4.164;VQSLOD=2.4195;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:40:56.74:0,57,966	1/1:10,0:10:6.53:61,7,0	0/0:33,0:10:14.20:0,14,138	0/0:27,0:12:0.02:0,0,99	0/0:25,0:25:32.89:0,33,517	0/1:28,0:28:25.89:89,0,26	1/1:9,0:9:8.80:75,9,0	1/1:8,15:20:2.39:263,2,0	1/1:12,0:12:3.85:310,4,0	1/1:6,13:22:43.65:580,44,0	1/1:8,15:22:35.75:511,36,0	0/1:12,0:12:24.88:71,0,25	0/0:14,0:14:30.02:0,30,342	1/1:16,0:15:26.59:190,27,0	0/1:17,0:17:16.47:79,0,16	1/1:5,12:19:3.70:399,4,0	0/1:29,1:28:26.80:174,0,27	0/1:14,0:12:30.01:30,0,59	0/1:33,0:28:45.40:237,0,45	1/1:17,0:15:3.80:101,4,0	1/1:9,0:7:2.98:38,3,0	1/1:9,0:9:20.78:151,21,0	0/0:9,0:9:17.84:0,18,141	0/0:11,0:10:20.60:0,21,227	0/1:16,0:16:2.08:41,0,2	1/1:18,0:18:10.65:242,11,0	0/1:25,0:25:28.15:166,0,28	1/1:8,0:8:15.03:195,15,0
chr10	65537744	.	T	TC	1201.36	PASS	AB=0.997;AC=25;AF=0.446;AN=56;BaseQRankSum=8.395;DP=514;FS=0.917;HRun=0;HaplotypeScore=93.2685;InbreedingCoeff=-0.0312;MQ=59.49;MQ0=18;MQRankSum=-3.192;QD=3.71;ReadPosRankSum=5.656;VQSLOD=2.5691;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:40:83.56:0,84,949	0/1:10,0:10:21.40:21,0,25	0/0:33,0:10:15.38:0,15,163	0/0:27,0:11:18.40:0,18,120	0/0:25,0:25:53.49:0,53,556	0/0:29,0:29:19.09:0,19,166	1/1:9,0:9:5.71:18,6,0	0/1:20,0:16:48.72:49,0,93	1/1:6,6:12:23.07:192,23,0	0/1:22,1:23:74.27:148,0,74	0/1:22,0:21:47.67:99,0,48	0/1:12,0:12:16.47:16,0,60	0/0:14,0:14:31.59:0,32,319	1/1:14,0:13:24.24:176,24,0	0/1:15,0:15:30.85:31,0,48	0/1:17,0:17:29.82:96,0,30	0/1:30,0:28:13.78:14,0,106	0/1:13,0:11:16.39:16,0,99	0/1:32,0:27:99:155,0,175	0/1:16,0:14:1.92:2,0,46	0/1:9,0:7:4.12:4,0,14	1/1:7,0:7:20.79:151,21,0	0/0:11,0:11:23.83:0,24,185	0/0:10,0:9:19.09:0,19,211	0/1:14,0:14:0.57:1,0,39	0/1:18,0:18:60.56:116,0,61	0/1:25,0:25:19.45:19,0,123	1/1:6,0:6:13.18:54,13,0
chr10	65537745	.	T	TTTC	347.86	PASS	AB=0.982;AC=16;AF=0.286;AN=56;BaseQRankSum=7.711;DP=508;FS=2.243;HRun=0;HaplotypeScore=115.8871;InbreedingCoeff=-0.1596;MQ=59.34;MQ0=18;MQRankSum=-2.898;QD=1.50;ReadPosRankSum=5.570;VQSLOD=1.9000;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:40:86.71:0,87,1127	0/1:9,0:9:4.70:5,0,22	0/0:33,0:10:19.36:0,19,171	0/0:27,0:11:12.42:0,12,145	0/0:25,0:25:53.38:0,53,640	0/0:29,0:29:20.51:0,21,203	0/1:7,0:7:0.44:0,0,21	0/1:21,0:17:2.05:2,0,162	0/1:8,4:12:15.38:157,0,15	0/1:24,0:24:11.51:12,0,157	0/1:22,0:21:64.35:64,0,77	0/0:12,0:12:2.77:0,3,84	0/0:14,0:14:24:0,24,288	0/1:14,0:13:0.47:0,0,21	0/0:15,0:15:28.78:0,29,170	0/1:16,0:16:75.77:87,0,76	0/1:29,0:26:57.08:57,0,122	0/0:12,0:10:7.82:0,8,137	0/0:31,0:26:26.42:0,26,274	0/0:16,0:14:0.02:0,0,69	0/1:8,0:6:4.10:4,0,14	0/1:7,0:7:0.38:0,0,15	0/0:11,0:11:23.91:0,24,194	0/0:10,0:9:18.02:0,18,239	0/1:14,0:14:9.58:10,0,36	0/1:18,0:18:33.52:34,0,126	0/1:25,0:25:10.26:10,0,160	1/1:6,0:6:12.45:45,12,0
chr10	65538211	.	G	GT	3992.16	PASS	AB=0.885;AC=32;AF=0.571;AN=56;BaseQRankSum=9.921;DP=395;FS=7.073;HRun=4;HaplotypeScore=93.2075;InbreedingCoeff=0.7754;MQ=65.08;MQ0=0;MQRankSum=-7.120;QD=18.06;ReadPosRankSum=-2.390;VQSLOD=2.4965;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:72.20:0,72,813	1/1:2,1:3:5.98:55,6,0	0/0:13,0:13:11.86:0,12,226	0/0:13,0:13:27:0,27,286	0/0:8,0:8:21.06:0,21,238	1/1:11,5:17:7.96:279,8,0	1/1:12,10:22:50.96:518,51,0	0/0:24,0:24:51.09:0,51,549	0/0:14,0:14:42.12:0,42,475	0/1:14,1:15:4.34:4,0,132	0/0:8,0:7:8.19:0,8,57	0/1:8,2:10:5.33:148,0,5	0/0:10,0:10:30.09:0,30,340	1/1:3,2:5:8.59:96,9,0	1/1:3,5:8:1.59:200,2,0	0/0:12,0:12:17.74:0,18,84	1/1:9,22:31:69.56:762,70,0	1/1:14,11:26:13.01:426,13,0	1/1:7,3:10:6.17:131,6,0	1/1:3,3:6:10.23:95,10,0	1/1:7,13:20:31.74:323,32,0	1/1:2,4:6:11.96:112,12,0	0/0:11,0:11:27.08:0,27,306	0/0:33,0:33:90.24:0,90,1010	1/1:6,3:10:19.52:166,20,0	1/1:4,8:12:27:287,27,0	1/1:9,5:14:27.98:289,28,0	1/1:0,4:5:9.02:100,9,0
chr10	65538215	.	TC	T	2499.92	PASS	AB=0.935;AC=35;AF=0.625;AN=56;BaseQRankSum=10.746;DP=396;FS=3.584;HRun=1;HaplotypeScore=91.2655;InbreedingCoeff=0.7281;MQ=63.13;MQ0=0;MQRankSum=-7.877;QD=10.12;ReadPosRankSum=-2.593;VQSLOD=0.6579;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:75.16:0,75,1003	1/1:2,0:2:5.65:31,6,0	0/0:12,0:12:27.49:0,27,336	0/0:12,0:12:20.66:0,21,279	0/0:11,0:11:29.41:0,29,333	1/1:18,0:17:8.11:95,8,0	1/1:23,0:23:53.12:289,53,0	0/0:18,0:18:54.10:0,54,651	0/0:17,0:17:45:0,45,550	0/1:17,1:18:32.38:123,0,32	0/1:8,0:7:16.03:25,0,16	1/1:7,2:9:11:138,11,0	0/0:11,0:11:30.10:0,30,413	1/1:5,0:5:14.86:109,15,0	1/1:8,1:9:15.14:128,15,0	0/1:10,2:12:7.64:94,0,8	1/1:32,0:32:70.72:359,71,0	1/1:29,0:29:49.06:341,49,0	1/1:11,0:11:23.43:171,23,0	1/1:5,0:5:11.84:63,12,0	1/1:19,0:19:35.89:204,36,0	1/1:6,0:6:10.69:70,11,0	0/0:9,0:9:27.09:0,27,375	0/0:32,0:32:96.20:0,96,1258	1/1:10,0:10:19.52:121,20,0	1/1:11,0:11:26.64:155,27,0	1/1:15,0:15:26.58:151,27,0	1/1:5,0:5:8.48:43,8,0
chr10	65538226	.	ATG	A	934.20	PASS	AB=0.976;AC=18;AF=0.321;AN=56;BaseQRankSum=11.958;DP=355;FS=4.043;HRun=0;HaplotypeScore=100.6167;InbreedingCoeff=-0.2725;MQ=59.53;MQ0=0;MQRankSum=-9.731;QD=4.35;ReadPosRankSum=2.976;VQSLOD=2.4430;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:68.67:0,69,1187	0/1:2,0:2:10.46:10,0,12	0/0:11,0:11:26.85:0,27,311	0/0:12,0:12:28.60:0,29,387	0/0:13,0:13:39.11:0,39,682	1/1:19,1:20:16.03:188,16,0	0/1:21,0:21:75.57:115,0,76	0/0:11,0:11:30.49:0,30,334	0/0:15,0:15:45.15:0,45,877	0/1:20,0:20:61.71:156,0,62	0/1:7,1:7:34.41:53,0,34	0/0:5,0:5:10.56:0,11,75	0/0:12,0:12:26.27:0,26,466	0/1:5,0:5:8.16:8,0,40	0/1:9,0:9:47.07:47,0,58	0/1:11,0:11:58.57:59,0,66	0/1:28,0:27:99:154,0,101	0/1:25,1:26:50.12:50,0,154	0/1:9,1:10:15.58:84,0,16	0/1:4,0:4:5.64:6,0,12	0/1:16,0:16:11.35:11,0,109	0/0:4,0:4:3.86:0,4,23	0/0:7,0:7:21:0,21,347	0/0:26,0:26:78.16:0,78,1413	0/1:7,0:7:3.49:3,0,64	0/1:11,1:12:64.44:64,0,89	0/1:12,1:13:60.67:76,0,61	0/1:3,0:3:8.97:9,0,16
chr10	65538227	.	TGG	T	3072.27	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=11.300;DP=366;FS=0.000;HRun=9;HaplotypeScore=97.8154;InbreedingCoeff=0.7968;MQ=59.22;MQ0=0;MQRankSum=-10.509;QD=13.36;ReadPosRankSum=-2.189;VQSLOD=1.1174;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:65.74:0,66,964	0/0:2,0:2:1.25:0,1,3	0/0:10,0:11:21.50:0,22,294	0/0:12,0:12:15.01:0,15,209	0/0:13,0:13:36.04:0,36,533	1/1:18,2:20:40.77:410,41,0	1/1:15,5:20:35.39:333,35,0	0/0:10,0:13:24.04:0,24,278	0/0:15,0:15:45.14:0,45,714	1/1:6,14:20:45.09:502,45,0	1/1:3,4:6:9.02:104,9,0	1/1:5,0:5:2.95:19,3,0	0/0:11,0:12:26.56:0,27,369	1/1:5,0:5:5.94:49,6,0	1/1:10,0:10:4.15:125,4,0	1/1:4,7:11:15.04:175,15,0	1/1:28,0:27:44.82:449,45,0	1/1:25,2:27:28.89:296,29,0	1/1:12,1:13:20.97:217,21,0	1/1:4,0:4:5.97:50,6,0	1/1:16,1:17:5.99:69,6,0	1/1:6,0:6:2.76:22,3,0	0/0:6,0:7:17.55:0,18,255	0/0:25,0:26:68.72:0,69,1081	1/1:6,1:7:2.78:31,3,0	1/1:12,0:12:18.01:182,18,0	1/1:13,0:13:23.66:198,24,0	1/1:5,0:5:5.46:44,5,0
chr10	65538234	.	G	GC	2970.62	PASS	AB=0.905;AC=35;AF=0.625;AN=56;BaseQRankSum=12.240;DP=339;FS=0.442;HRun=0;HaplotypeScore=87.4150;InbreedingCoeff=0.7525;MQ=59.11;MQ0=0;MQRankSum=-8.854;QD=14.85;ReadPosRankSum=-1.777;VQSLOD=4.7998;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:74.51:0,75,873	1/1:1,0:1:2.04:6,2,0	0/0:12,0:12:30.03:0,30,331	0/0:10,0:10:17.03:0,17,177	0/0:15,0:15:39.02:0,39,480	1/1:6,15:20:47.77:422,48,0	1/1:11,11:22:33.30:266,33,0	0/0:12,0:12:8.62:0,9,160	0/0:15,0:15:45.14:0,45,605	0/1:17,2:19:24.71:142,0,25	1/1:5,0:4:2.51:7,3,0	1/1:4,1:5:9.14:64,9,0	0/0:12,0:12:27.46:0,27,334	1/1:0,4:4:8.60:73,9,0	1/1:2,5:7:17.16:158,17,0	0/0:8,0:8:0.04:0,0,2	1/1:8,16:23:56.42:548,56,0	1/1:9,17:26:53.02:463,53,0	1/1:2,10:12:30.42:236,30,0	1/1:4,1:5:8.01:64,8,0	1/1:5,10:15:15.36:104,15,0	1/1:4,1:5:6.36:33,6,0	0/0:6,0:6:17.95:0,18,225	0/0:24,0:24:72.15:0,72,960	1/1:2,2:4:3.89:40,4,0	1/1:4,5:9:23.21:222,23,0	1/1:3,8:11:8.79:253,9,0	1/1:1,4:5:8.81:71,9,0
chr10	65538239	.	GCA	G	4928.57	PASS	AB=0.952;AC=37;AF=0.661;AN=56;BaseQRankSum=10.842;DP=334;FS=1.408;HRun=0;HaplotypeScore=74.9362;InbreedingCoeff=0.6844;MQ=61.99;MQ0=0;MQRankSum=-10.784;QD=23.25;ReadPosRankSum=-0.869;VQSLOD=5.1572;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:75.23:0,75,1346	1/1:2,0:2:5.98:60,6,0	0/0:13,0:13:30.07:0,30,483	0/1:9,1:10:21.91:22,0,260	0/0:14,0:14:36.12:0,36,681	1/1:3,19:21:51.36:604,51,0	1/1:6,16:22:41.11:452,41,0	0/0:13,0:13:39.11:0,39,647	0/0:14,0:14:42.14:0,42,795	0/1:17,1:18:37.88:38,0,73	1/1:4,0:3:8.28:53,8,0	1/1:5,2:7:21.04:258,21,0	0/0:12,0:12:33.11:0,33,595	1/1:1,4:5:12.03:156,12,0	1/1:3,5:8:23.91:258,24,0	0/1:7,0:7:7.66:8,0,37	1/1:9,14:22:57.02:675,57,0	1/1:7,16:23:58.91:731,59,0	1/1:3,9:12:31.77:324,32,0	1/1:2,1:3:9.03:133,9,0	1/1:2,13:15:22.93:242,23,0	1/1:2,1:3:5.99:54,6,0	0/0:6,0:6:18.06:0,18,338	0/0:23,0:23:69.24:0,69,1265	1/1:1,3:4:6.02:78,6,0	1/1:1,7:8:24.05:313,24,0	1/1:5,8:13:6.29:359,6,0	1/1:0,3:3:9.03:110,9,0
chr10	65538240	.	C	CG	3622.58	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=9.279;DP=339;FS=0.000;HRun=2;HaplotypeScore=76.0059;InbreedingCoeff=0.9160;MQ=61.84;MQ0=0;MQRankSum=-8.685;QD=20.47;ReadPosRankSum=-0.427;VQSLOD=3.3344;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:72.24:0,72,996	1/1:1,1:2:5.97:56,6,0	0/0:13,0:13:29.42:0,29,333	0/0:10,0:10:17.70:0,18,183	0/0:14,0:14:36.12:0,36,502	1/1:21,1:21:32.95:440,33,0	1/1:22,0:22:15.68:213,16,0	0/0:14,0:14:36.10:0,36,459	0/0:15,0:15:42.14:0,42,574	0/0:18,0:18:39.12:0,39,252	0/0:4,0:3:8.89:0,9,62	1/1:4,3:7:17.97:172,18,0	0/0:12,0:12:33.11:0,33,458	1/1:5,0:5:11.95:104,12,0	1/1:7,1:8:23.80:222,24,0	0/0:7,0:7:20.84:0,21,160	1/1:15,8:22:56.52:578,57,0	1/1:20,4:24:51.27:595,51,0	1/1:14,0:14:23.45:268,23,0	1/1:2,1:3:9.01:101,9,0	1/1:14,1:15:13.92:159,14,0	1/1:1,2:3:6.02:65,6,0	0/0:6,0:6:18.06:0,18,251	0/0:23,0:23:69.20:0,69,940	1/1:4,0:4:6.01:64,6,0	1/1:7,1:8:21.04:214,21,0	1/1:10,4:14:16.85:282,17,0	1/1:3,0:3:9.02:91,9,0
chr10	65538559	.	A	AGGGTAATAT	7741.55	PASS	AB=0.591;AC=27;AF=0.540;AN=50;BaseQRankSum=-6.052;DP=245;FS=3.016;HRun=0;HaplotypeScore=44.4732;InbreedingCoeff=0.7159;MQ=34.18;MQ0=44;MQRankSum=-6.178;QD=95.57;ReadPosRankSum=3.713;VQSLOD=4.8503;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:9:12.04:0,12,391	1/1:0,1:2:3.01:149,3,0	./.	./.	0/0:6,0:6:12.04:0,12,383	1/1:0,11:13:30.10:1491,30,0	1/1:0,2:2:6.02:298,6,0	0/0:22,0:12:36.11:0,36,1075	0/0:23,0:22:21.07:0,21,673	0/0:10,0:7:18.06:0,18,587	0/0:7,0:6:5.89:0,6,189	1/1:0,5:6:12.04:583,12,0	0/0:21,0:17:27.09:0,27,847	1/1:0,4:4:12.04:597,12,0	1/1:0,8:11:24.08:1192,24,0	0/0:22,0:20:29.92:0,30,971	1/1:0,2:3:6.02:299,6,0	0/0:7,0:5:12.04:0,12,327	1/1:1,2:4:12.02:349,12,0	1/1:0,2:3:6.02:298,6,0	1/1:0,1:3:3.01:149,3,0	1/1:0,2:2:6.02:297,6,0	0/0:9,0:8:12.04:0,12,367	0/0:9,0:6:6.02:0,6,152	1/1:0,2:3:6.02:298,6,0	0/1:4,7:10:70.80:996,0,71	1/1:0,7:11:14.65:746,15,0	./.
chr10	65538805	.	AATAATAATAATAATT	A	312.56	PASS	AC=8;AF=0.444;AN=18;BaseQRankSum=2.424;DP=52;FS=11.553;HRun=0;HaplotypeScore=21.9049;MQ=21.41;MQ0=26;MQRankSum=1.493;QD=34.73;ReadPosRankSum=1.093;VQSLOD=0.2865;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:5:3.01:0,3,224	1/1:1,0:1:3.01:36,3,0	./.	0/0:1,0:1:0:0,0,0	./.	./.	./.	0/0:16,0:5:15:0,15,171	0/0:1,0:1:2.98:0,3,21	./.	./.	./.	0/0:3,0:2:0:0,0,0	./.	./.	./.	./.	./.	./.	1/1:0,3:3:8.95:286,9,0	./.	./.	./.	./.	./.	1/1:1,0:1:3:25,3,0	./.	1/1:4,0:1:3.01:53,3,0
chr10	65540431	.	T	TA	12801.32	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-15.867;DP=661;FS=0.000;HRun=4;HaplotypeScore=58.5138;InbreedingCoeff=0.9995;MQ=90.29;MQ0=0;MQRankSum=-4.850;QD=35.17;ReadPosRankSum=3.299;VQSLOD=5.1955;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:51.13:0,51,567	1/1:1,15:16:42.14:574,42,0	0/0:37,0:37:99:0,99,1079	0/0:29,0:29:78.22:0,78,880	0/0:32,0:32:78.22:0,78,885	1/1:1,27:28:69.23:944,69,0	1/1:3,20:23:60.20:821,60,0	0/0:22,0:22:60.16:0,60,667	0/0:22,0:22:66.19:0,66,748	0/0:20,0:20:57.15:0,57,639	0/0:24,0:24:63.18:0,63,714	1/1:1,17:18:45.15:616,45,0	0/0:24,0:24:69.20:0,69,782	1/1:0,20:20:51.17:698,51,0	1/1:4,35:39:93.31:1272,93,0	0/0:26,0:26:66.17:0,66,738	1/1:1,20:21:60.20:821,60,0	0/0:9,0:9:24.07:0,24,272	1/1:0,29:29:87.29:1190,87,0	1/1:3,31:34:93.31:1272,93,0	1/1:0,19:19:54.18:739,54,0	1/1:1,19:20:51.17:698,51,0	0/0:24,0:24:66.12:0,66,721	0/0:9,0:9:27.08:0,27,306	1/1:2,12:14:33.11:451,33,0	1/1:5,20:25:60.20:821,60,0	1/1:0,39:37:99:1394,102,0	1/1:5,14:19:36.12:492,36,0
chr10	65540952	.	AAAAG	A	3625.54	PASS	AB=1.000;AC=37;AF=0.661;AN=56;BaseQRankSum=7.648;DP=424;FS=28.206;HRun=0;HaplotypeScore=72.3704;InbreedingCoeff=0.8380;MQ=49.05;MQ0=17;MQRankSum=-0.889;QD=14.50;ReadPosRankSum=-1.554;VQSLOD=0.8560;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:34:93.06:0,93,1825	0/1:8,0:7:3.93:110,0,4	0/0:13,0:4:8.78:0,9,66	0/0:10,0:3:6.80:0,7,32	0/0:28,0:28:68.93:0,69,1074	1/1:15,1:16:15.01:183,15,0	1/1:21,1:19:14.97:149,15,0	0/0:27,0:24:41.74:0,42,625	0/0:11,0:10:27.03:0,27,291	1/1:18,2:17:48.21:523,48,0	1/1:4,1:5:12.02:138,12,0	1/1:9,0:9:26.02:192,26,0	0/0:12,0:11:29.70:0,30,392	1/1:8,0:5:2.06:23,2,0	1/1:14,1:14:29.99:284,30,0	1/1:3,6:9:18.01:262,18,0	1/1:20,1:19:30:236,30,0	1/1:6,0:5:5.03:30,5,0	1/1:15,0:14:30.99:271,31,0	1/1:23,0:23:35.61:268,36,0	1/1:8,0:7:10.99:117,11,0	1/1:7,0:7:9.85:72,10,0	0/0:19,0:18:35.89:0,36,679	0/0:19,0:19:42.05:0,42,723	1/1:15,0:14:26.02:198,26,0	1/1:21,1:21:43.96:364,44,0	1/1:14,0:14:14.06:126,14,0	1/1:7,0:6:10.55:80,11,0
chr10	65540953	.	AAAG	A	5193.07	PASS	AB=1.000;AC=40;AF=0.714;AN=56;BaseQRankSum=5.955;DP=420;FS=32.776;HRun=0;HaplotypeScore=60.7466;InbreedingCoeff=0.8271;MQ=49.17;MQ0=14;MQRankSum=-1.231;QD=19.52;ReadPosRankSum=-1.459;VQSLOD=2.5410;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:34:88.85:0,89,1471	1/1:5,3:7:13.56:190,14,0	0/1:14,0:5:0.37:0,0,25	0/1:10,0:3:7.17:7,0,10	0/0:29,0:29:68.46:0,68,916	1/1:3,13:16:15.05:222,15,0	1/1:5,15:18:15.05:228,15,0	0/0:27,0:24:42.36:0,42,466	0/0:11,0:10:26.84:0,27,204	1/1:19,2:19:54.14:494,54,0	1/1:5,0:5:11.97:112,12,0	1/1:9,0:9:27.02:306,27,0	0/0:14,0:13:35.57:0,36,365	1/1:8,0:5:5.51:57,6,0	1/1:5,9:13:30.06:449,30,0	1/1:8,1:9:18.02:219,18,0	1/1:20,0:18:34.36:389,34,0	1/1:5,0:5:5.98:68,6,0	1/1:5,8:12:33.02:421,33,0	1/1:5,18:23:38.70:486,39,0	1/1:5,2:6:17.49:203,17,0	1/1:0,7:7:11.99:146,12,0	0/0:19,0:18:35.65:0,36,534	0/0:19,0:19:42.05:0,42,632	1/1:15,0:14:35.49:311,35,0	1/1:7,14:20:45.03:573,45,0	1/1:5,9:14:14.78:206,15,0	1/1:7,0:6:12:105,12,0
chr10	65541051	.	C	CA	1297.34	PASS	AB=0.931;AC=7;AF=0.125;AN=56;BaseQRankSum=-4.951;DP=370;FS=0.650;HRun=4;HaplotypeScore=52.6630;InbreedingCoeff=0.7973;MQ=87.40;MQ0=0;MQRankSum=-1.762;QD=18.53;ReadPosRankSum=0.846;VQSLOD=2.8442;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:21.06:0,21,235	0/0:5,0:5:15.04:0,15,164	0/0:23,0:23:63.08:0,63,691	0/0:13,0:13:33.03:0,33,350	0/0:17,0:17:36.10:0,36,401	0/0:11,0:11:30.08:0,30,334	0/0:18,0:18:30.08:0,30,338	0/0:19,0:19:48.12:0,48,535	0/0:14,0:14:33.09:0,33,374	1/1:3,14:17:42.14:574,42,0	1/1:0,18:18:45.15:614,45,0	0/0:7,0:7:21.06:0,21,233	0/0:13,0:13:21.06:0,21,236	0/0:14,0:13:36.10:0,36,405	0/0:8,0:8:15.04:0,15,166	1/1:0,8:8:18.06:246,18,0	0/0:5,0:5:12.03:0,12,134	0/0:7,0:6:12.03:0,12,135	0/0:8,0:8:24.07:0,24,272	0/0:21,0:21:48.14:0,48,543	0/0:4,0:4:12.03:0,12,136	0/0:14,0:14:36.02:0,36,407	0/0:14,0:14:39.11:0,39,439	0/0:10,0:10:15.04:0,15,168	0/0:15,0:15:45.13:0,45,510	0/1:25,2:26:9.82:10,0,675	0/0:23,0:23:63.18:0,63,710	0/0:7,0:7:12.03:0,12,136
chr10	65541670	.	GTTAA	G	545.03	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.642;DP=553;FS=9.128;HRun=0;HaplotypeScore=87.5777;InbreedingCoeff=0.9816;MQ=80.83;MQ0=0;MQRankSum=0.493;QD=38.93;ReadPosRankSum=2.730;VQSLOD=3.3500;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:78.24:0,78,2012	0/0:10,0:10:24.08:0,24,599	0/0:19,0:19:54.19:0,54,1411	0/0:14,0:14:42.13:0,42,1023	0/0:26,0:26:75.21:0,75,1878	0/0:23,0:23:66.21:0,66,1671	0/0:14,0:14:39.12:0,39,1011	0/0:34,0:34:99:0,99,2654	1/1:1,13:14:33.11:640,33,0	0/0:21,0:21:63.22:0,63,1718	0/0:21,0:21:63.20:0,63,1613	0/0:22,0:22:66.21:0,66,1748	0/0:15,0:15:45.14:0,45,1176	0/0:14,0:14:39.12:0,39,940	0/0:12,0:12:30.10:0,30,791	0/0:14,0:14:39.13:0,39,1062	0/0:20,0:19:57.17:0,57,1486	0/0:17,0:16:48.13:0,48,1253	0/0:19,0:19:57.19:0,57,1475	0/0:30,0:30:84.27:0,84,2166	0/0:23,0:23:63.20:0,63,1669	0/0:22,0:22:66.19:0,66,1630	0/0:27,0:27:81.28:0,81,2179	0/0:17,0:17:51.16:0,51,1339	0/0:26,0:24:78.27:0,78,1986	0/0:25,0:25:75.26:0,75,2000	0/0:20,0:19:60.14:0,60,1480	0/0:5,0:5:15.05:0,15,328
chr10	65541788	.	CT	C	6504.09	PASS	AB=0.741;AC=42;AF=0.750;AN=56;BaseQRankSum=6.567;DP=557;FS=6.338;HRun=11;HaplotypeScore=53.0476;InbreedingCoeff=0.7973;MQ=57.98;MQ0=8;MQRankSum=-1.198;QD=15.02;ReadPosRankSum=3.870;VQSLOD=5.2462;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:38,1:41:49.62:0,50,857	1/1:1,6:7:11.96:98,12,0	0/1:6,1:6:8.91:9,0,91	0/0:5,0:3:3:0,3,26	0/0:22,0:22:48.02:0,48,480	1/1:4,23:28:52.95:424,53,0	1/1:6,9:14:26.96:222,27,0	1/1:5,21:25:56.90:464,57,0	1/1:2,13:13:29.97:246,30,0	1/1:8,17:24:15.90:332,16,0	1/1:5,14:19:32.91:271,33,0	1/1:8,12:20:26.94:222,27,0	0/0:12,0:12:33.07:0,33,344	1/1:2,10:12:20.96:172,21,0	1/1:1,13:15:29:228,29,0	1/1:6,17:23:52.17:421,52,0	1/1:6,23:29:55.96:449,56,0	1/1:11,10:20:48.32:375,48,0	1/1:11,8:18:26.68:209,27,0	0/1:7,17:25:1.08:300,0,1	1/1:1,13:14:29.96:246,30,0	1/1:0,14:14:38.95:319,39,0	0/0:22,1:23:15.84:0,16,396	0/0:21,0:20:54.14:0,54,576	1/1:5,21:27:55.95:449,56,0	1/1:7,28:36:76.83:612,77,0	1/1:5,15:20:6.95:264,7,0	1/1:5,9:12:20.97:172,21,0
chr10	65542875	.	TCC	T	253.21	PASS	AB=0.765;AC=11;AF=0.275;AN=40;BaseQRankSum=6.866;DP=111;FS=3.489;HRun=3;HaplotypeScore=47.1704;InbreedingCoeff=-0.2680;MQ=49.34;MQ0=3;MQRankSum=-4.734;QD=3.42;ReadPosRankSum=6.135;VQSLOD=-0.7542;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:1,0:1:3.01:0,3,43	./.	./.	./.	1/1:2,2:4:6.41:42,6,0	0/0:9,0:9:15.94:0,16,217	./.	0/0:2,0:2:2.69:0,3,43	0/0:2,0:2:6.02:0,6,84	./.	0/1:6,2:8:26.41:26,0,191	0/0:2,0:1:3.01:0,3,45	0/1:2,3:5:46.71:47,0,71	0/1:3,4:7:6.68:66,0,7	0/0:1,0:1:3.01:0,3,43	0/1:4,1:5:14.58:15,0,36	0/0:4,0:4:9:0,9,107	0/1:6,2:7:34.42:34,0,73	0/0:3,0:3:9.03:0,9,127	0/1:13,1:13:5.60:6,0,285	0/1:3,4:7:28.03:70,0,28	0/0:1,0:1:3.01:0,3,42	./.	0/1:6,1:6:11.33:11,0,77	0/1:6,3:9:56.98:57,0,109	0/0:8,1:9:1.83:0,2,244	./.
chr10	65542879	.	TCCCTCCCTCCCTCC	T	2460.03	PASS	AB=0.807;AC=14;AF=0.304;AN=46;BaseQRankSum=6.522;DP=125;FS=4.259;HRun=0;HaplotypeScore=70.2926;InbreedingCoeff=-0.2565;MQ=50.15;MQ0=3;MQRankSum=-4.392;QD=25.90;ReadPosRankSum=5.617;VQSLOD=1.3710;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:1,0:1:3.01:0,3,39	0/0:1,0:1:2.97:0,3,20	1/1:3,0:1:2.60:10,3,0	./.	./.	0/1:5,2:7:41.53:215,0,42	0/0:10,0:10:1.76:0,2,96	0/0:1,0:1:1.82:0,2,5	0/0:2,0:2:2.71:0,3,20	0/0:3,0:3:8.65:0,9,46	./.	0/1:6,2:8:72.56:213,0,73	0/0:2,0:1:2.22:0,2,7	0/1:3,3:6:41.45:295,0,41	1/1:3,4:7:9.99:412,10,0	0/0:1,0:1:2.97:0,3,20	0/1:4,1:5:38.37:95,0,38	0/0:4,0:4:8.92:0,9,61	0/1:6,2:8:61.10:232,0,61	0/0:3,0:3:8.87:0,9,56	0/1:14,1:14:99:170,0,138	0/1:5,4:9:75.26:377,0,75	0/0:1,0:1:3.01:0,3,39	./.	0/1:7,1:7:61.38:90,0,61	0/1:7,3:10:53.25:322,0,53	0/1:8,1:9:98.54:159,0,99	./.
chr10	65545172	.	TTCTGTCTG	T	1911.68	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=5.853;DP=584;FS=0.725;HRun=0;HaplotypeScore=153.8426;InbreedingCoeff=0.9314;MQ=75.01;MQ0=3;MQRankSum=-6.339;QD=42.48;ReadPosRankSum=1.427;VQSLOD=3.6005;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:24:41.94:0,42,367	0/0:4,0:4:9.03:0,9,300	0/0:37,0:33:41.63:0,42,1342	0/0:31,0:30:39.13:0,39,1424	0/0:5,0:17:35.97:0,36,320	0/0:24,0:24:51.16:0,51,2024	0/0:27,0:27:54.17:0,54,2063	0/0:33,0:39:63.21:0,63,2031	0/0:9,0:22:45.15:0,45,1520	1/1:6,10:16:27.09:647,27,0	1/1:2,6:8:15.05:345,15,0	0/0:13,0:13:21.07:0,21,723	0/0:16,0:16:39.07:0,39,1517	0/0:17,0:17:39.13:0,39,1624	0/0:32,0:32:60.21:0,60,2502	1/1:7,14:21:42.14:1060,42,0	0/0:18,0:18:45.15:0,45,1850	0/0:20,0:19:45.15:0,45,1686	0/0:8,0:8:15.05:0,15,625	0/0:22,0:22:42.14:0,42,1615	0/0:32,0:32:60.14:0,60,2180	0/0:16,0:16:27.08:0,27,1025	0/0:21,0:21:36.12:0,36,1386	0/0:17,0:17:45.14:0,45,1688	0/0:35,0:35:84.29:0,84,3407	0/0:30,0:30:57.11:0,57,2073	0/0:15,0:15:39.13:0,39,1607	0/0:2,0:2:6.02:0,6,250
chr10	65545554	.	GT	G	10369.17	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=6.130;DP=503;FS=3.772;HRun=2;HaplotypeScore=59.9034;InbreedingCoeff=0.9705;MQ=58.25;MQ0=13;MQRankSum=-2.570;QD=34.11;ReadPosRankSum=2.923;VQSLOD=5.1780;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:81.26:0,81,1191	1/1:1,6:7:12.03:153,12,0	0/0:25,0:7:19.56:0,20,137	0/0:20,0:3:4.56:0,5,31	0/0:19,0:19:48.16:0,48,717	1/1:0,21:21:60.15:759,60,0	1/1:0,20:20:54.12:679,54,0	0/0:32,0:32:93.25:0,93,1294	0/0:15,0:15:45.15:0,45,671	1/1:2,11:13:39.11:486,39,0	1/1:1,9:10:27.09:347,27,0	1/1:0,20:20:54.15:700,54,0	0/0:18,0:18:47.98:0,48,686	1/1:0,17:17:51.16:651,51,0	1/1:0,17:17:45.15:582,45,0	1/1:0,11:11:33.06:408,33,0	1/1:1,32:33:84.27:1089,84,0	1/1:0,16:16:48.16:621,48,0	1/1:3,23:25:69.22:889,69,0	1/1:0,13:13:36.03:414,36,0	1/1:0,12:12:27.09:350,27,0	1/1:0,10:10:21.07:272,21,0	0/0:16,0:16:45.13:0,45,622	0/0:26,0:26:75.24:0,75,1102	1/1:0,13:13:36.12:467,36,0	1/1:1,23:24:69.20:879,69,0	1/1:0,10:10:17.91:233,18,0	1/1:0,11:11:30.10:389,30,0
chr10	65545577	.	GA	G	1500.96	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=2.191;DP=535;FS=4.413;HRun=10;HaplotypeScore=88.3749;InbreedingCoeff=0.8784;MQ=64.00;MQ0=5;MQRankSum=-3.160;QD=13.77;ReadPosRankSum=-0.723;VQSLOD=3.7228;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,1:35:42.95:0,43,676	0/0:6,0:6:12.03:0,12,133	0/0:26,0:14:26.93:0,27,271	0/1:15,0:5:16.96:17,0,36	0/0:19,0:19:51.13:0,51,556	0/0:18,1:19:19.05:0,19,415	0/0:27,0:27:69.18:0,69,755	1/1:4,28:32:77.94:669,78,0	1/1:2,20:22:25.88:346,26,0	1/1:2,9:11:26.99:234,27,0	1/1:3,9:12:20.96:179,21,0	0/0:25,0:25:66.14:0,66,712	0/0:21,0:21:38.28:0,38,557	0/0:17,0:17:45.12:0,45,498	0/0:15,0:15:35.95:0,36,380	1/1:3,14:17:26.98:234,27,0	0/0:35,0:35:81.17:0,81,867	0/0:14,0:14:36.04:0,36,376	0/0:25,0:25:37.18:0,37,636	0/0:14,0:14:33.01:0,33,334	0/0:13,0:13:29.44:0,29,307	0/0:10,0:10:24.06:0,24,258	0/0:14,0:14:30.07:0,30,323	0/0:25,0:25:72.19:0,72,796	0/0:16,0:16:45.12:0,45,498	0/0:24,0:24:40.90:0,41,664	0/0:16,0:16:45.08:0,45,497	0/0:9,0:9:25.62:0,26,270
chr10	65546320	.	GGTGTGT	G	2553.31	PASS	AC=32;AF=0.640;AN=50;BaseQRankSum=4.464;DP=547;FS=0.677;HRun=0;HaplotypeScore=118.6562;InbreedingCoeff=0.7852;MQ=58.38;MQ0=22;MQRankSum=-5.466;QD=8.51;ReadPosRankSum=2.947;VQSLOD=2.0951;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:21.07:0,21,532	1/1:3,2:5:3.01:61,3,0	./.	./.	0/0:21,0:19:26.92:0,27,769	1/1:18,0:17:8.82:97,9,0	1/1:9,4:14:6.02:102,6,0	0/0:26,0:25:9:0,9,107	1/1:10,0:21:21.07:293,21,0	0/0:11,0:13:30.10:0,30,674	0/0:13,0:15:3.01:0,3,72	1/1:16,3:16:9.03:182,9,0	0/0:9,0:14:18.06:0,18,460	1/1:16,5:21:27.01:412,27,0	1/1:15,5:21:12.03:206,12,0	0/0:15,0:25:15:0,15,198	1/1:22,0:21:3.01:36,3,0	./.	1/1:14,1:14:3.90:62,4,0	1/1:17,5:22:9.03:163,9,0	1/1:29,0:28:11.36:97,11,0	1/1:7,10:16:9.03:181,9,0	0/0:26,0:26:26.17:0,26,696	0/0:25,0:25:35.37:0,35,949	1/1:6,8:15:12.04:223,12,0	1/1:14,7:21:18.04:285,18,0	1/1:15,9:24:15.05:284,15,0	1/1:6,0:7:5.89:57,6,0
chr10	65546637	.	AGACCC	A	2745	PASS	AB=0.970;AC=19;AF=0.339;AN=56;BaseQRankSum=3.900;DP=409;FS=43.974;HRun=0;HaplotypeScore=93.2337;InbreedingCoeff=-0.4087;MQ=45.08;MQ0=21;MQRankSum=-6.659;QD=10.81;ReadPosRankSum=0.327;VQSLOD=0.3990;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:44.34:0,44,966	0/0:3,0:3:7.27:0,7,84	0/0:22,0:2:1.16:0,1,38	0/0:22,0:4:5.02:0,5,59	0/0:24,0:22:41.44:0,41,602	0/1:14,0:12:88.10:88,0,197	0/1:13,0:12:65.41:65,0,216	0/1:23,1:23:10.02:10,0,538	0/0:11,0:11:6.84:0,7,273	0/1:18,2:18:99:412,0,105	0/1:13,0:12:23.42:194,0,23	0/1:9,0:7:99:125,0,132	0/0:8,0:8:24.06:0,24,362	0/1:12,0:12:99:126,0,123	0/1:17,0:16:99:217,0,155	1/1:12,0:12:11.59:229,12,0	0/1:13,1:13:99:145,0,248	0/1:6,1:7:57.42:57,0,115	0/1:18,2:16:99:298,0,257	0/1:24,0:22:99:321,0,191	0/1:3,0:3:43.08:68,0,43	0/1:9,0:9:86.76:87,0,148	0/0:16,0:16:36.07:0,36,504	0/0:19,0:19:34.88:0,35,648	0/1:12,0:11:94.30:115,0,94	0/1:14,0:14:99:182,0,379	0/1:15,1:15:99:163,0,346	0/0:4,0:4:8.30:0,8,166
chr10	65547381	.	A	ATGAATT	19453.10	PASS	AB=0.795;AC=32;AF=0.571;AN=56;BaseQRankSum=-4.994;DP=461;FS=0.000;HRun=0;HaplotypeScore=111.1703;InbreedingCoeff=0.8271;MQ=82.38;MQ0=0;MQRankSum=-15.064;QD=72.05;ReadPosRankSum=2.719;VQSLOD=5.6459;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:60.21:0,60,1363	1/1:0,5:5:15.05:519,15,0	0/0:19,0:18:41.48:0,41,772	0/0:23,0:19:38.72:0,39,794	0/0:24,0:24:72.25:0,72,1638	1/1:8,15:23:54.18:1755,54,0	1/1:7,9:16:39.07:1030,39,0	0/0:34,0:34:93.32:0,93,2090	0/0:10,0:10:18.06:0,18,411	0/0:19,0:19:57.20:0,57,1231	0/0:13,0:13:36.11:0,36,780	1/1:6,16:22:54.14:1778,54,0	0/1:11,1:12:68.13:68,0,690	1/1:1,9:9:18.06:625,18,0	1/1:6,12:19:48.16:1536,48,0	0/0:9,0:9:21.07:0,21,480	1/1:8,7:15:17.90:868,18,0	1/1:2,8:9:2.45:544,2,0	1/1:6,11:19:51.13:1518,51,0	1/1:8,21:29:78.18:2141,78,0	0/1:2,2:4:9.68:98,0,10	1/1:4,6:11:33.08:882,33,0	0/0:7,0:7:21.07:0,21,480	0/0:8,0:8:24.08:0,24,526	1/1:3,12:16:36.12:1165,36,0	1/1:6,20:25:42.24:2242,42,0	1/1:5,20:24:63.22:2056,63,0	1/1:1,6:7:18.06:625,18,0
chr10	65547578	.	G	GA	2226.23	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=-2.156;DP=378;FS=3.954;HRun=1;HaplotypeScore=64.6030;InbreedingCoeff=0.8093;MQ=66.52;MQ0=11;MQRankSum=-0.323;QD=11.66;ReadPosRankSum=1.287;VQSLOD=2.1405;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:31.90:0,32,242	1/1:8,0:8:14.95:134,15,0	0/0:30,0:6:17.79:0,18,142	0/0:22,0:11:12.98:0,13,117	0/0:19,0:19:30.93:0,31,240	1/1:14,0:14:23.87:208,24,0	1/1:8,0:8:17.96:161,18,0	0/0:23,0:22:53.85:0,54,456	0/0:9,0:9:5.99:0,6,50	0/0:15,0:15:30.80:0,31,257	0/0:7,0:8:18.40:0,18,153	1/1:4,9:13:2.87:39,3,0	0/0:6,0:6:11.20:0,11,81	1/1:11,0:9:20.78:165,21,0	1/1:1,5:6:3.01:34,3,0	0/0:9,0:9:2.96:0,3,25	1/1:26,0:25:50.96:498,51,0	1/1:6,2:6:2.98:39,3,0	1/1:12,0:12:4.98:125,5,0	1/1:7,18:26:41.52:306,42,0	1/1:10,0:10:21:210,21,0	1/1:10,0:10:23.95:206,24,0	0/0:9,0:9:23.20:0,23,184	0/0:16,0:16:29.78:0,30,227	1/1:14,0:14:14.95:141,15,0	1/1:1,4:5:11.96:101,12,0	1/1:5,10:13:3:34,3,0	1/1:5,0:5:5.87:35,6,0
chr10	65547580	.	T	TG	285.30	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-3.413;DP=414;FS=3.220;HRun=0;HaplotypeScore=68.5077;InbreedingCoeff=0.7186;MQ=61.68;MQ0=14;MQRankSum=0.440;QD=7.71;ReadPosRankSum=0.922;VQSLOD=2.9481;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:40.38:0,40,304	0/0:9,0:9:22.03:0,22,142	0/0:36,0:5:14.79:0,15,113	0/0:28,0:9:13.69:0,14,91	0/0:19,0:19:40.83:0,41,281	0/0:16,0:16:39.81:0,40,283	0/0:11,0:11:20.85:0,21,161	0/0:26,0:24:58.91:0,59,486	0/0:10,0:10:10.12:0,10,72	1/1:17,0:17:30.96:254,31,0	1/1:10,1:10:3.20:128,3,0	0/0:13,0:13:11.63:0,12,66	0/0:6,0:6:17.02:0,17,114	0/0:11,0:9:21.55:0,22,162	0/0:6,0:6:4.48:0,4,21	1/1:1,8:9:2.79:24,3,0	0/0:28,0:27:61.12:0,61,429	0/0:9,0:7:10.40:0,10,43	0/0:14,0:14:29.75:0,30,218	0/0:26,0:26:59.56:0,60,381	0/0:12,0:12:22.54:0,23,156	0/0:9,0:9:23.74:0,24,177	0/0:9,0:9:23.34:0,23,182	0/0:16,0:16:37.18:0,37,291	0/0:13,0:13:26:0,26,156	0/0:5,0:5:11.29:0,11,73	0/0:16,0:14:8.32:0,8,43	0/0:9,0:9:11.81:0,12,78
chr10	65548356	.	A	ATTTT	6502.70	PASS	AB=0.771;AC=36;AF=0.643;AN=56;BaseQRankSum=5.981;DP=438;FS=1.627;HRun=11;HaplotypeScore=72.5218;InbreedingCoeff=0.8261;MQ=58.72;MQ0=16;MQRankSum=-4.809;QD=22.74;ReadPosRankSum=0.070;VQSLOD=2.9121;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:36:70.32:0,70,937	1/1:4,5:8:12.04:245,12,0	0/0:13,0:6:8.43:0,8,49	0/0:7,0:4:2.81:0,3,15	0/0:17,0:15:23.87:0,24,315	1/1:4,7:14:21.07:421,21,0	1/1:8,4:15:17.97:290,18,0	0/0:32,0:31:65.96:0,66,883	0/0:8,0:8:21.05:0,21,285	1/1:8,0:19:27.75:221,28,0	1/1:7,0:23:12.05:292,12,0	1/1:6,3:10:15.05:236,15,0	0/0:8,0:7:17.79:0,18,216	1/1:4,7:8:12.04:218,12,0	1/1:3,4:7:12.04:246,12,0	1/1:3,0:10:20.47:119,20,0	1/1:7,14:21:27.09:594,27,0	1/1:5,6:9:13.80:188,14,0	1/1:13,6:17:18.06:397,18,0	1/1:7,11:18:36.12:758,36,0	0/1:6,0:7:0:0,0,0	1/1:4,5:8:15.05:315,15,0	0/0:12,0:12:24.01:0,24,326	0/0:16,0:13:33.08:0,33,450	1/1:12,5:13:21.07:361,21,0	1/1:13,11:20:29.91:525,30,0	1/1:10,9:20:45.11:855,45,0	0/1:5,4:9:99:222,0,102
chr10	65549098	.	GA	G	309.90	PASS	AB=0.633;AC=20;AF=0.400;AN=50;BaseQRankSum=-0.896;DP=148;FS=12.500;HRun=14;HaplotypeScore=18.7713;InbreedingCoeff=0.3888;MQ=68.77;MQ0=4;MQRankSum=-3.341;QD=5.74;ReadPosRankSum=2.482;VQSLOD=0.4165;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:7:9.01:0,9,84	0/0:1,1:1:2.50:0,2,9	0/0:22,0:9:17.04:0,17,121	0/0:15,0:3:8.26:0,8,44	0/0:6,2:8:9.01:0,9,84	1/1:0,2:2:5.95:41,6,0	0/0:1,3:3:0:0,0,0	0/0:10,0:10:27.02:0,27,247	./.	0/1:2,2:4:18.89:32,0,19	0/1:1,2:3:0.03:0,0,0	0/0:0,4:3:0:0,0,0	0/0:1,0:1:2.88:0,3,15	1/1:2,2:4:5.88:38,6,0	1/1:2,2:3:2.92:17,3,0	0/1:1,2:2:14.57:15,0,22	0/1:4,3:8:3.21:71,0,3	0/0:5,1:5:3:0,3,28	1/1:2,4:9:20.99:120,21,0	1/1:2,3:4:5.74:40,6,0	./.	./.	1/1:2,1:3:2.90:20,3,0	0/0:3,0:3:6.01:0,6,56	0/0:2,0:2:0:0,0,0	1/1:0,3:2:4.63:16,5,0	0/0:1,4:4:0:0,0,0	1/1:0,2:2:5.95:41,6,0
chr10	65549129	.	A	AAAAAG	4205.46	PASS	AB=0.968;AC=38;AF=0.679;AN=56;BaseQRankSum=0.914;DP=324;FS=34.323;HRun=0;HaplotypeScore=151.7928;InbreedingCoeff=0.5449;MQ=73.03;MQ0=3;MQRankSum=-7.079;QD=18.05;ReadPosRankSum=-4.004;VQSLOD=1.1526;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:26.73:0,27,285	1/1:6,1:8:16.01:198,16,0	0/0:22,0:13:4.65:0,5,278	0/1:20,0:12:31.75:32,0,106	0/0:17,0:17:6.44:0,6,255	1/1:2,0:5:6.02:113,6,0	1/1:4,5:11:12.04:272,12,0	0/0:25,0:25:51.97:0,52,394	0/0:3,0:3:5.93:0,6,78	0/1:6,0:6:2:44,0,2	0/1:10,0:10:8.26:66,0,8	1/1:10,0:9:11.36:129,11,0	0/0:2,0:2:2.95:0,3,26	1/1:7,0:7:14.70:121,15,0	1/1:3,4:7:6.02:123,6,0	1/1:5,0:6:11.47:122,11,0	1/1:8,9:20:27.51:491,28,0	1/1:5,0:12:8.99:130,9,0	1/1:18,0:19:47.91:502,48,0	1/1:9,0:8:10.38:69,10,0	1/1:2,0:2:3.88:26,4,0	1/1:5,2:8:11.21:255,11,0	0/1:12,0:11:3.77:4,0,119	0/0:6,0:6:15.01:0,15,210	1/1:9,6:14:8.42:343,8,0	1/1:11,10:20:45.72:600,46,0	1/1:5,4:9:14.53:214,15,0	1/1:2,3:7:17.97:352,18,0
chr10	65549143	.	TA	T	322.24	PASS	AB=0.734;AC=6;AF=0.107;AN=56;BaseQRankSum=5.828;DP=306;FS=129.508;HRun=1;HaplotypeScore=45.4467;InbreedingCoeff=-0.1405;MQ=89.36;MQ0=0;MQRankSum=-6.040;QD=4.88;ReadPosRankSum=3.184;VQSLOD=0.4966;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:30.08:0,30,453	0/1:4,4:8:64.91:65,0,173	0/0:17,0:16:48.16:0,48,747	0/0:16,0:15:34.80:0,35,450	0/0:7,6:13:7.72:0,8,318	0/0:10,0:10:24.01:0,24,353	0/0:10,0:10:9.03:0,9,144	0/0:23,0:23:66.23:0,66,1054	0/0:6,0:6:18.06:0,18,283	0/1:8,2:10:53.36:53,0,353	0/1:4,5:9:68.12:68,0,129	0/0:9,0:9:27.09:0,27,430	0/0:4,0:4:12.03:0,12,169	0/0:8,0:8:24.05:0,24,356	0/0:6,0:6:6.02:0,6,96	0/0:3,0:3:6.02:0,6,96	0/0:19,0:19:27.09:0,27,431	0/0:11,0:11:18.06:0,18,280	0/0:17,0:17:51.17:0,51,815	0/1:4,4:8:99:103,0,147	0/0:7,0:7:18.03:0,18,240	0/0:8,1:9:24.03:0,24,352	0/1:8,6:14:99:129,0,325	0/0:12,0:12:36.08:0,36,547	0/0:8,3:11:12.04:0,12,191	0/1:15,2:17:27.04:27,0,667	0/0:10,0:10:23.09:0,23,309	0/0:5,0:5:12.04:0,12,191
chr10	65549813	.	C	CAGTGT	18071.94	PASS	AB=0.600;AC=37;AF=0.661;AN=56;BaseQRankSum=4.113;DP=1075;FS=11.866;HRun=0;HaplotypeScore=280.8562;InbreedingCoeff=0.8006;MQ=61.63;MQ0=9;MQRankSum=-10.040;QD=24.29;ReadPosRankSum=1.336;VQSLOD=3.3249;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,123,2296	1/1:3,17:20:26.74:697,27,0	0/0:11,0:5:1.63:0,2,24	0/0:39,0:22:9.71:0,10,38	0/0:23,0:23:48.16:0,48,900	1/1:6,23:30:29.80:848,30,0	1/1:10,29:40:9.73:263,10,0	0/0:29,0:28:53.24:0,53,774	0/0:36,0:36:99:0,108,2014	1/1:10,34:54:99:2475,114,0	1/1:3,16:20:2.53:34,3,0	1/1:14,34:51:60.12:1670,60,0	0/0:49,0:49:99:0,120,2248	1/1:2,56:58:49.90:1438,50,0	1/1:7,50:62:32.05:976,32,0	1/1:2,54:57:72.06:2052,72,0	1/1:2,16:19:15.05:445,15,0	0/1:4,7:12:38.02:427,0,38	1/1:6,15:22:48.16:1148,48,0	1/1:5,28:37:14.43:406,14,0	1/1:15,77:96:11.83:286,12,0	1/1:5,24:32:3.01:89,3,0	0/0:27,0:27:60.19:0,60,1147	0/0:68,0:68:99:0,181,3279	1/1:3,32:35:23.92:695,24,0	1/1:2,39:47:99:2812,129,0	1/1:3,30:34:35.96:1043,36,0	1/1:1,9:14:9.03:267,9,0
chr10	65549833	.	CAGTGT	C	1524.91	PASS	AB=0.990;AC=4;AF=0.071;AN=56;BaseQRankSum=2.143;DP=1032;FS=10.154;HRun=0;HaplotypeScore=319.5920;InbreedingCoeff=0.4546;MQ=58.61;MQ0=15;MQRankSum=0.552;QD=14.95;ReadPosRankSum=-3.153;VQSLOD=1.5495;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,120,3600	0/0:20,0:20:47.24:0,47,1079	0/1:23,0:8:36.47:36,0,85	0/1:46,0:17:8.81:9,0,193	0/0:21,0:21:60.15:0,60,1654	0/0:24,0:24:41.69:0,42,841	0/0:36,0:36:48.09:0,48,1092	1/1:0,32:31:90.15:1592,90,0	0/0:40,0:40:99:0,117,3433	0/0:49,0:48:99:0,138,3690	0/0:17,0:17:14.52:0,15,245	0/0:44,0:44:93.07:0,93,2063	0/0:41,0:41:99:0,120,3588	0/0:60,0:59:89.15:0,89,1757	0/0:60,0:60:72.23:0,72,1708	0/0:63,0:63:99:0,111,2450	0/0:15,0:15:21.05:0,21,591	0/0:9,0:9:21.05:0,21,480	0/0:21,0:20:56.76:0,57,1577	0/0:35,0:35:48.38:0,48,904	0/0:89,0:88:59.98:0,60,1405	0/0:26,0:26:23.80:0,24,489	0/0:31,0:31:90.24:0,90,2468	0/0:55,0:55:99:0,166,5057	0/0:39,0:38:50.89:0,51,1174	0/0:49,0:49:99:0,144,3777	0/0:32,0:32:62.55:0,63,1503	0/0:10,0:10:9.03:0,9,207
chr10	65550094	.	T	TCTTC	30507.66	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=-15.606;DP=841;FS=3.831;HRun=0;HaplotypeScore=116.7692;InbreedingCoeff=0.9999;MQ=88.61;MQ0=0;MQRankSum=-7.191;QD=65.19;ReadPosRankSum=5.193;VQSLOD=7.1251;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,122,2562	1/1:0,16:16:45.15:1157,45,0	0/0:38,0:38:99:0,102,1792	0/0:29,0:29:69.19:0,69,1176	0/0:23,0:23:69.22:0,69,1255	1/1:4,46:51:99:3359,126,0	1/1:5,20:27:57.20:1511,57,0	0/0:41,0:40:99:0,99,1784	0/0:32,0:32:93.32:0,93,1722	0/0:31,0:31:90.31:0,90,1669	0/0:14,0:14:39.13:0,39,728	1/1:9,25:36:87.30:2189,87,0	0/0:27,0:27:78.25:0,78,1423	1/1:4,23:29:75.26:1930,75,0	1/1:6,37:44:99:2789,108,0	0/0:31,0:31:87.29:0,87,1555	1/1:2,13:15:33.11:880,33,0	1/1:1,11:12:36.12:936,36,0	1/1:3,16:20:57.20:1392,57,0	1/1:5,28:34:96.33:2363,96,0	1/1:5,31:38:87.30:2276,87,0	1/1:4,23:27:69.23:1718,69,0	0/0:30,0:30:87.27:0,87,1537	0/0:26,0:26:75.20:0,75,1319	1/1:2,30:32:81.28:2157,81,0	1/1:5,35:42:99:2935,117,0	1/1:3,24:30:75.26:1956,75,0	1/1:1,14:15:36.12:960,36,0
chr10	65551115	.	C	CA	1971.80	PASS	AB=0.966;AC=7;AF=0.125;AN=56;BaseQRankSum=-10.278;DP=548;FS=10.389;HRun=6;HaplotypeScore=51.2212;InbreedingCoeff=0.8637;MQ=74.72;MQ0=0;MQRankSum=-1.803;QD=21.20;ReadPosRankSum=2.111;VQSLOD=2.1483;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:66.13:0,66,666	0/0:7,0:7:21.05:0,21,214	0/1:26,0:28:6.03:6,0,486	0/0:10,0:10:27.04:0,27,265	0/0:34,0:34:96.22:0,96,979	0/0:22,0:22:66.15:0,66,673	0/0:15,0:15:45.10:0,45,459	0/0:30,0:30:78.16:0,78,791	0/0:18,0:18:51.09:0,51,513	1/1:1,15:16:42.13:528,42,0	1/1:5,28:33:84.27:1055,84,0	0/0:11,0:11:30.07:0,30,306	0/0:20,0:20:57.12:0,57,581	0/0:23,0:23:63.12:0,63,635	0/0:17,0:17:51.11:0,51,520	1/1:1,15:16:42.13:528,42,0	0/0:14,0:14:30.04:0,30,299	0/0:18,0:18:42.06:0,42,419	0/0:17,0:17:48.11:0,48,490	0/0:29,0:29:81.18:0,81,826	0/0:19,0:19:54.12:0,54,551	0/0:12,0:12:33.07:0,33,337	0/0:25,0:25:66.15:0,66,673	0/0:12,0:12:27.06:0,27,275	0/0:10,0:10:30.06:0,30,299	0/0:23,1:24:34.42:0,34,666	0/0:28,0:28:72.15:0,72,734	0/0:16,0:16:48.11:0,48,490
chr10	65552009	.	CTGTGTGTGTGTGTGTG	C	5331.08	PASS	AB=0.736;AC=33;AF=0.589;AN=56;BaseQRankSum=7.128;DP=546;FS=1.258;HRun=0;HaplotypeScore=216.8910;InbreedingCoeff=0.5546;MQ=61.75;MQ0=7;MQRankSum=-6.276;QD=15.02;ReadPosRankSum=3.163;VQSLOD=3.3848;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:30:51.63:0,52,2275	0/0:2,1:3:3.37:0,3,17	0/0:17,0:15:4.26:0,4,46	0/0:27,0:15:24.04:0,24,302	0/0:19,0:22:33.10:0,33,1461	1/1:8,11:19:3.01:132,3,0	0/1:8,8:16:16.28:223,0,16	0/0:12,0:17:27.78:0,28,272	0/0:4,0:12:12.02:0,12,171	1/1:33,0:32:6.32:341,6,0	1/1:21,0:21:6:133,6,0	1/1:7,17:24:6.02:265,6,0	0/0:10,0:10:15.05:0,15,818	0/1:6,5:12:1.98:235,0,2	1/1:5,7:12:3.01:48,3,0	1/1:14,0:14:3.01:112,3,0	1/1:6,28:34:21.07:889,21,0	1/1:7,0:21:11.07:287,11,0	0/1:18,2:21:13.44:397,0,13	1/1:7,8:15:6.02:256,6,0	1/1:22,0:23:11.57:179,12,0	1/1:4,13:17:3.01:132,3,0	0/0:17,0:19:42.14:0,42,2440	0/0:28,0:30:63.19:0,63,3648	1/1:6,17:24:1.63:769,2,0	1/1:8,12:22:16.70:587,17,0	1/1:10,10:19:8.77:285,9,0	1/1:7,0:7:8.90:62,9,0
chr10	65552016	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGC	T	2294.89	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=6.468;DP=530;FS=8.008;HRun=0;HaplotypeScore=374.3246;InbreedingCoeff=0.6620;MQ=58.52;MQ0=8;MQRankSum=1.192;QD=27.65;ReadPosRankSum=0.305;VQSLOD=0.2052;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:70.99:0,71,7258	0/0:3,0:3:9.02:0,9,372	0/0:14,0:12:11.76:0,12,417	0/0:25,0:13:26.28:0,26,1465	0/0:24,0:24:60.16:0,60,5466	0/0:16,0:16:12.01:0,12,251	0/0:15,0:15:21.93:0,22,614	0/0:15,0:14:42.11:0,42,1869	0/0:11,0:11:18.06:0,18,1179	1/1:3,27:29:61.85:1669,62,0	1/1:1,20:21:6.02:466,6,0	0/0:24,0:24:21.04:0,21,603	0/0:10,0:9:21.06:0,21,2158	0/0:10,0:10:12.04:0,12,420	0/0:12,0:12:12.01:0,12,264	1/1:2,10:12:3.01:278,3,0	0/0:34,0:34:27.08:0,27,1180	0/1:20,0:20:10.28:10,0,57	0/0:19,0:18:54.12:0,54,1657	0/0:14,0:14:18.02:0,18,488	0/0:24,0:24:18.97:0,19,600	0/0:15,0:15:9.02:0,9,275	0/0:24,0:24:63.67:0,64,7214	0/0:37,0:34:87.16:0,87,9922	0/0:22,0:22:27.08:0,27,1097	0/0:21,0:21:51.16:0,51,2364	0/0:18,0:18:15.01:0,15,475	0/0:4,0:4:12.04:0,12,369
chr10	65552858	.	TC	T	3158.14	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=11.916;DP=569;FS=6.999;HRun=2;HaplotypeScore=51.3230;InbreedingCoeff=0.8980;MQ=71.82;MQ0=0;MQRankSum=0.981;QD=35.48;ReadPosRankSum=0.962;VQSLOD=3.8567;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:63.20:0,63,924	0/0:10,0:10:30.09:0,30,430	0/0:15,0:15:40:0,40,567	0/0:11,0:11:30.10:0,30,447	0/0:47,0:47:99:0,141,2060	0/0:25,0:25:72.24:0,72,1079	0/0:20,0:20:57.18:0,57,833	0/0:27,0:27:78.24:0,78,1112	0/0:6,0:6:18.04:0,18,249	1/1:0,43:43:99:1635,129,0	1/1:0,30:30:90.29:1162,90,0	0/0:13,0:13:39.10:0,39,541	0/0:13,0:13:36.11:0,36,518	0/0:11,0:11:33.11:0,33,494	0/0:17,0:17:51.17:0,51,764	1/1:2,14:16:0.19:492,0,0	0/0:15,0:15:45.11:0,45,629	0/0:12,0:12:36.09:0,36,510	0/0:22,0:22:63.21:0,63,940	0/0:28,0:28:84.28:0,84,1236	0/0:12,0:12:33.11:0,33,491	0/0:19,0:19:57.19:0,57,854	0/0:24,0:24:72.22:0,72,1042	0/0:16,0:16:45.14:0,45,652	0/0:20,0:20:60.20:0,60,896	0/0:33,1:34:63.38:0,63,1388	0/0:18,0:18:51.17:0,51,764	0/0:23,0:23:69.23:0,69,1034
chr10	65555428	.	AT	A	3057.84	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-2.010;DP=736;FS=1.363;HRun=2;HaplotypeScore=99.3876;InbreedingCoeff=0.9959;MQ=66.99;MQ0=0;MQRankSum=-0.736;QD=33.98;ReadPosRankSum=1.213;VQSLOD=3.6678;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:92.63:0,93,1294	0/0:15,0:15:45.15:0,45,669	0/0:30,0:30:90.18:0,90,1234	0/0:24,0:23:66.21:0,66,941	0/0:23,0:23:69.21:0,69,990	0/0:24,0:24:69.23:0,69,1034	0/0:32,0:32:96.32:0,96,1432	0/0:29,0:29:81.26:0,81,1173	0/0:32,0:32:96.33:0,96,1437	1/1:0,40:40:99:1524,120,0	1/1:1,21:22:63.12:795,63,0	0/0:27,0:27:81.26:0,81,1188	0/0:28,0:28:84.28:0,84,1245	0/0:15,0:15:45.15:0,45,672	0/0:28,0:28:84.27:0,84,1239	1/1:0,28:28:69.21:882,69,0	0/0:32,0:32:90.28:0,90,1307	0/0:19,0:19:54.18:0,54,804	0/0:18,0:18:51.16:0,51,729	0/0:32,0:32:96.33:0,96,1439	0/0:27,0:27:81.26:0,81,1195	0/0:35,0:35:99:0,105,1568	0/0:18,0:18:54.18:0,54,809	0/0:23,0:23:69.23:0,69,1034	0/0:13,0:13:36.12:0,36,540	0/0:25,2:27:16.53:0,17,1040	0/0:38,0:38:99:0,114,1698	0/0:23,0:23:63.21:0,63,944
chr10	65557280	.	AT	A	373.43	PASS	AB=0.815;AC=7;AF=0.125;AN=56;BaseQRankSum=5.425;DP=500;FS=2.536;HRun=14;HaplotypeScore=58.5450;InbreedingCoeff=0.3490;MQ=75.66;MQ0=2;MQRankSum=-1.949;QD=4.61;ReadPosRankSum=0.201;VQSLOD=1.4198;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,4:35:13.13:0,13,515	0/0:1,0:2:5.84:0,6,42	0/0:30,2:21:15.33:0,15,229	0/0:22,0:17:12.72:0,13,118	0/0:20,2:23:18.70:0,19,434	0/1:15,2:16:2.13:2,0,255	0/0:26,2:28:21.80:0,22,455	1/1:10,15:26:6.33:251,6,0	0/0:16,1:18:27.28:0,27,376	0/0:21,0:22:47.75:0,48,412	0/0:13,1:14:12.31:0,12,231	0/1:10,5:15:36.77:37,0,200	0/0:6,1:7:0.40:0,0,133	0/0:11,1:12:29.96:0,30,264	0/0:15,0:18:32.87:0,33,293	0/0:10,2:12:9.42:0,9,220	0/0:22,1:26:42.17:0,42,494	1/1:5,10:15:10.21:183,10,0	0/0:15,0:15:33.34:0,33,275	0/0:19,1:21:24.31:0,24,339	0/0:13,0:12:30.03:0,30,279	0/1:6,2:8:23.16:23,0,90	0/0:6,0:8:18.42:0,18,153	0/0:19,1:22:30.09:0,30,381	0/0:19,0:19:39:0,39,349	0/0:15,1:18:20.48:0,20,285	0/0:17,1:18:15.41:0,15,274	0/0:12,1:13:0.91:0,1,148
chr10	65557448	.	T	TACACAC	6656.27	PASS	AB=0.876;AC=35;AF=0.648;AN=54;BaseQRankSum=-2.912;DP=585;FS=1.051;HRun=0;HaplotypeScore=132.7716;InbreedingCoeff=0.6399;MQ=58.79;MQ0=8;MQRankSum=-6.500;QD=18.59;ReadPosRankSum=-1.952;VQSLOD=4.1195;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:44.15:0,44,974	1/1:3,7:13:11.75:274,12,0	0/1:6,0:3:11.67:12,0,34	0/1:21,0:14:11.62:12,0,70	0/0:23,0:25:39.01:0,39,665	1/1:5,20:26:11.91:310,12,0	1/1:12,10:22:8.82:130,9,0	0/0:33,0:33:50.57:0,51,747	0/0:18,0:19:37.90:0,38,591	1/1:4,0:16:2.15:81,2,0	0/0:11,0:20:7.75:0,8,34	1/1:6,9:18:12.04:319,12,0	0/0:17,0:16:30.07:0,30,530	1/1:7,16:25:26.96:799,27,0	1/1:6,14:23:23.95:589,24,0	1/1:5,0:15:0.10:1,0,0	0/1:9,10:22:44:402,0,44	1/1:8,7:16:9.87:209,10,0	1/1:11,11:20:35.32:546,35,0	1/1:9,8:18:26.94:724,27,0	1/1:25,0:25:24.48:406,24,0	1/1:2,8:10:9.03:294,9,0	0/0:21,0:23:34.01:0,34,843	0/0:36,0:39:65.74:0,66,1254	./.	1/1:9,11:23:36.02:727,36,0	1/1:5,17:24:24.08:727,24,0	1/1:1,4:9:2.31:97,2,0
chr10	65558227	.	TAAA	T	4566.59	PASS	AB=1.000;AC=31;AF=0.554;AN=56;BaseQRankSum=5.829;DP=518;FS=4.353;HRun=17;HaplotypeScore=116.8645;InbreedingCoeff=0.9257;MQ=79.48;MQ0=3;MQRankSum=-1.753;QD=16.08;ReadPosRankSum=6.148;VQSLOD=3.5490;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:20:54.12:0,54,768	1/1:3,6:9:8.84:92,9,0	0/1:27,0:16:4.37:4,0,116	0/0:24,0:19:12.77:0,13,183	0/0:19,0:23:54.97:0,55,730	1/1:3,15:20:38.86:374,39,0	1/1:4,12:16:29.89:308,30,0	0/0:7,0:18:37.16:0,37,308	0/0:4,0:13:34.12:0,34,271	0/0:10,0:23:32.03:0,32,162	0/0:12,0:27:62.94:0,63,413	1/1:3,8:11:21.01:216,21,0	0/0:20,0:23:39.09:0,39,591	1/1:2,11:13:29.97:308,30,0	1/1:8,9:17:26.74:276,27,0	0/0:7,0:17:21.95:0,22,144	1/1:5,18:23:48.05:492,48,0	0/0:14,0:15:33.04:0,33,451	1/1:5,5:9:11.92:123,12,0	1/1:6,20:27:55.02:531,55,0	1/1:2,7:9:21.02:216,21,0	1/1:5,6:13:14.14:118,14,0	0/0:11,0:12:30.08:0,30,467	0/0:13,0:16:39.11:0,39,635	1/1:7,12:19:29.80:294,30,0	1/1:5,12:19:22.10:354,22,0	1/1:8,22:30:47.31:487,47,0	1/1:6,12:19:38.62:373,39,0
chr10	65561816	.	T	TA	10346.32	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=-11.953;DP=484;FS=4.528;HRun=8;HaplotypeScore=44.6686;InbreedingCoeff=0.9843;MQ=78.86;MQ0=0;MQRankSum=-1.812;QD=28.74;ReadPosRankSum=0.083;VQSLOD=5.1040;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:69.02:0,69,625	1/1:1,4:5:12.04:138,12,0	0/0:9,0:8:12:0,12,109	0/0:19,0:19:50.58:0,51,423	0/0:24,0:24:66.01:0,66,594	1/1:2,13:15:39.05:433,39,0	1/1:2,11:13:30.09:346,30,0	1/1:6,35:41:99:1135,105,0	1/1:3,7:10:21.06:239,21,0	1/1:1,19:20:57.14:639,57,0	1/1:2,22:24:63.12:710,63,0	1/1:1,12:13:33.10:381,33,0	0/0:13,0:13:36.02:0,36,329	1/1:0,7:8:24.07:273,24,0	1/1:3,21:24:57.17:654,57,0	1/1:1,16:17:42.12:485,42,0	1/1:2,22:24:51.05:588,51,0	1/1:2,13:15:39.12:450,39,0	1/1:4,11:15:33.10:381,33,0	1/1:3,28:31:81.21:919,81,0	1/1:1,11:12:30.09:346,30,0	1/1:0,5:5:15:158,15,0	0/0:20,0:20:60.03:0,60,549	0/0:14,0:14:38.98:0,39,349	1/1:1,12:13:39.11:445,39,0	1/1:2,25:27:72.19:811,72,0	1/1:1,17:18:42.06:468,42,0	1/1:0,10:10:30.09:346,30,0
chr10	65561848	.	T	TA	282.87	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-0.866;DP=512;FS=4.824;HRun=6;HaplotypeScore=73.5935;InbreedingCoeff=0.9303;MQ=75.63;MQ0=0;MQRankSum=-1.754;QD=25.72;ReadPosRankSum=0.201;VQSLOD=3.7376;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:75.13:0,75,756	0/0:9,0:9:24.04:0,24,238	0/0:3,0:3:9.02:0,9,92	0/0:19,0:19:40.95:0,41,398	0/0:30,0:30:81.18:0,81,826	0/0:18,0:18:54.11:0,54,543	0/0:11,0:11:27.04:0,27,268	0/0:43,0:43:99:0,114,1146	1/1:0,11:11:30.10:377,30,0	0/0:24,0:24:66.15:0,66,673	0/0:22,0:22:57.13:0,57,582	0/0:16,0:16:36.05:0,36,359	0/0:17,0:17:48.11:0,48,490	0/0:11,0:11:18.02:0,18,177	0/0:17,0:17:36.07:0,36,367	0/0:17,0:17:39.09:0,39,398	0/0:21,0:21:51.12:0,51,520	0/0:21,0:21:60.13:0,60,611	0/0:18,0:18:51.10:0,51,513	0/0:34,0:34:93.21:0,93,949	0/0:10,0:10:24.05:0,24,245	0/0:10,0:10:30.07:0,30,306	0/0:21,0:21:60.12:0,60,606	0/0:11,0:11:27.06:0,27,275	0/0:11,0:11:27.06:0,27,275	0/0:24,0:24:66.14:0,66,667	0/0:21,0:21:47.90:0,48,483	0/0:14,0:14:39.09:0,39,398
chr10	65562404	.	T	TG	14276.44	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=2.913;DP=685;FS=0.290;HRun=3;HaplotypeScore=92.1987;InbreedingCoeff=0.9988;MQ=80.47;MQ0=0;MQRankSum=-3.888;QD=38.27;ReadPosRankSum=1.592;VQSLOD=4.7200;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:93.28:0,93,1116	1/1:0,12:12:33.11:462,33,0	0/0:26,0:26:72.21:0,72,842	0/0:25,0:25:66.18:0,66,760	0/0:16,0:16:48.15:0,48,576	1/1:4,20:24:60.20:840,60,0	1/1:0,25:25:72.24:1008,72,0	0/0:43,0:42:99:0,108,1287	0/0:21,0:21:60.18:0,60,720	0/0:27,0:27:75.22:0,75,889	0/0:14,0:14:36.11:0,36,430	1/1:2,28:30:75.25:1048,75,0	0/0:23,0:23:69.21:0,69,828	1/1:2,23:25:69.23:966,69,0	1/1:1,35:36:99:1428,102,0	0/0:20,0:20:57.17:0,57,684	1/1:2,24:26:75.25:1049,75,0	0/0:21,0:21:57.15:0,57,670	1/1:0,23:23:69.20:945,69,0	1/1:1,28:29:69.23:964,69,0	1/1:3,46:49:99:1849,132,0	1/1:1,20:21:53.88:756,54,0	0/0:15,0:15:42.13:0,42,504	0/0:27,0:27:78.24:0,78,935	1/1:1,14:15:42.14:588,42,0	1/1:0,23:23:69.21:946,69,0	1/1:0,27:28:84.28:1174,84,0	1/1:1,6:7:18.06:252,18,0
chr10	65562901	.	CA	C	2300.30	PASS	AB=0.657;AC=35;AF=0.625;AN=56;BaseQRankSum=-3.546;DP=459;FS=10.670;HRun=15;HaplotypeScore=59.4220;InbreedingCoeff=0.5881;MQ=55.30;MQ0=19;MQRankSum=1.852;QD=7.19;ReadPosRankSum=3.531;VQSLOD=1.8687;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,16:29:17.98:209,18,0	1/1:2,4:7:10.89:63,11,0	0/0:26,0:11:19.33:0,19,121	0/0:20,0:8:8.26:0,8,72	1/1:8,12:20:34.49:216,34,0	1/1:3,12:15:28.62:179,29,0	0/1:7,11:19:33.06:123,0,33	1/1:5,13:20:39.46:240,39,0	1/1:6,8:14:20.63:134,21,0	0/0:12,0:17:35.15:0,35,241	0/0:10,0:15:23.71:0,24,139	0/1:10,5:15:1.46:18,0,1	0/0:12,0:11:20.96:0,21,178	1/1:5,10:16:19.69:121,20,0	1/1:5,13:19:22.66:140,23,0	0/0:12,0:16:29.90:0,30,194	1/1:4,10:13:20.63:134,21,0	1/1:7,9:14:14.73:96,15,0	1/1:10,8:20:7.14:158,7,0	0/1:5,3:7:22.70:27,0,23	1/1:4,8:12:14.61:90,15,0	1/1:6,6:13:15.86:89,16,0	0/0:12,1:13:10.52:0,11,209	0/0:19,1:17:1.73:0,2,138	1/1:5,7:12:19.76:121,20,0	1/1:5,11:17:31.53:198,32,0	0/1:6,13:19:3.77:98,0,4	0/1:3,4:5:33.68:43,0,34
chr10	65563687	.	T	TAC	19912.61	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-16.166;DP=726;FS=14.492;HRun=0;HaplotypeScore=71.2632;InbreedingCoeff=0.9988;MQ=78.17;MQ0=3;MQRankSum=-4.022;QD=41.75;ReadPosRankSum=4.531;VQSLOD=5.8940;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,99,1317	1/1:2,13:15:39.13:683,39,0	0/0:22,0:21:41.37:0,41,474	0/0:26,0:26:63.58:0,64,793	0/0:37,0:36:99:0,105,1350	1/1:1,16:18:42.14:735,42,0	1/1:2,19:21:42.14:722,42,0	0/0:26,0:26:60.17:0,60,760	0/0:23,0:23:63.20:0,63,836	1/1:3,36:39:99:1834,108,0	1/1:3,29:32:72.25:1259,72,0	1/1:4,29:33:78.27:1365,78,0	0/0:29,0:29:81.23:0,81,1048	1/1:4,11:17:24.08:420,24,0	1/1:3,29:33:81.28:1412,81,0	1/1:0,26:25:66.23:1157,66,0	1/1:3,31:33:84.29:1472,84,0	1/1:0,10:10:27.05:441,27,0	1/1:9,17:26:54.16:905,54,0	1/1:1,31:32:90.31:1574,90,0	1/1:2,27:30:72.25:1262,72,0	1/1:2,23:25:63.22:1104,63,0	0/0:34,0:34:99:0,102,1362	0/0:12,0:12:36.12:0,36,487	1/1:2,19:21:51.17:890,51,0	1/1:4,24:28:72.25:1259,72,0	1/1:2,22:24:60.21:1050,60,0	1/1:3,9:11:21.07:368,21,0
chr10	65564309	.	CT	C	6810.14	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=9.468;DP=530;FS=8.863;HRun=10;HaplotypeScore=57.8958;InbreedingCoeff=0.9694;MQ=66.19;MQ0=4;MQRankSum=-1.018;QD=20.03;ReadPosRankSum=3.574;VQSLOD=5.6516;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:78.68:0,79,883	1/1:1,12:13:29.99:260,30,0	0/0:20,0:10:20.75:0,21,183	0/0:16,0:12:17.76:0,18,157	0/0:17,0:17:42.11:0,42,464	1/1:1,12:14:35.03:293,35,0	1/1:1,15:15:29.99:260,30,0	0/0:30,0:31:66.89:0,67,706	0/0:25,0:25:63.17:0,63,696	1/1:6,11:17:32.96:286,33,0	1/1:5,9:14:29.99:260,30,0	1/1:0,18:18:44.99:391,45,0	0/0:16,0:16:45.08:0,45,484	1/1:4,22:26:29.80:487,30,0	1/1:4,22:26:62.98:547,63,0	1/1:3,12:15:35.98:312,36,0	1/1:4,18:22:53.98:469,54,0	1/1:3,14:17:16.16:244,16,0	1/1:5,27:32:80.98:703,81,0	1/1:3,13:16:38.97:338,39,0	1/1:4,10:14:23.98:208,24,0	1/1:1,9:10:23.98:208,24,0	0/0:11,1:13:3.84:0,4,245	0/0:16,0:15:33.07:0,33,356	1/1:0,12:12:35.99:313,36,0	1/1:1,16:17:47.99:416,48,0	1/1:3,28:32:77.02:657,77,0	1/1:2,7:9:18:156,18,0
chr10	65564332	.	CT	C	622.19	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=5.834;DP=483;FS=0.750;HRun=7;HaplotypeScore=74.9339;InbreedingCoeff=0.9178;MQ=57.71;MQ0=12;MQRankSum=-7.715;QD=20.07;ReadPosRankSum=1.172;VQSLOD=3.2264;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,100,1184	0/0:11,0:11:21.07:0,21,264	0/0:18,0:6:11.72:0,12,94	0/0:9,0:4:6.88:0,7,62	0/0:16,0:15:33.05:0,33,414	0/0:13,0:13:39.11:0,39,477	0/0:17,0:16:27.04:0,27,322	0/0:27,0:25:54.15:0,54,646	0/0:23,0:22:57.18:0,57,717	1/1:2,11:12:30.06:305,30,0	1/1:2,8:9:24.05:244,24,0	0/0:17,0:17:45.14:0,45,565	0/0:18,0:18:51.10:0,51,609	0/0:24,0:24:51.14:0,51,616	0/0:21,0:20:51.14:0,51,616	1/1:1,7:8:21.05:214,21,0	0/0:23,0:23:69.22:0,69,867	0/0:16,0:16:31.27:0,31,346	0/0:27,0:25:48.11:0,48,582	0/0:21,0:21:52.41:0,52,635	0/0:11,0:11:24.07:0,24,289	0/0:15,0:15:24.07:0,24,291	0/0:14,0:14:39.12:0,39,479	0/0:12,0:11:27.09:0,27,339	0/0:15,0:15:30.76:0,31,411	0/0:18,1:19:10.05:0,10,416	0/0:27,0:27:66.17:0,66,810	0/0:4,0:4:9.03:0,9,113
chr10	65564486	.	AGT	A	437.78	PASS	AB=0.951;AC=22;AF=0.458;AN=48;BaseQRankSum=3.052;DP=433;FS=3.057;HRun=0;HaplotypeScore=64.8577;InbreedingCoeff=0.0444;MQ=62.81;MQ0=13;MQRankSum=1.963;QD=1.70;ReadPosRankSum=1.377;VQSLOD=1.3715;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:29,1:31:5.85:46,6,0	0/1:7,1:8:18.84:26,0,19	./.	./.	1/1:14,4:17:3.01:32,3,0	0/0:17,0:18:3.83:0,4,156	0/1:14,0:14:16.94:17,0,141	./.	1/1:10,0:12:5.68:28,6,0	0/0:15,0:15:9.01:0,9,88	0/1:6,0:10:0:0,0,0	0/1:12,0:12:6.38:6,0,155	1/1:13,3:16:12.03:128,12,0	0/1:17,1:18:17.01:17,0,159	0/1:7,2:8:17.93:26,0,18	0/0:8,0:8:2.99:0,3,24	0/1:28,1:28:0.01:0,0,280	0/1:19,1:19:40.38:40,0,179	./.	0/0:14,0:14:6.02:0,6,88	0/0:17,0:16:14.97:0,15,138	0/1:13,0:13:20.15:20,0,91	1/1:18,0:18:2.49:9,2,0	1/1:7,4:12:14.87:142,15,0	0/1:14,1:15:45.97:46,0,135	0/0:20,0:19:6.39:0,6,40	0/0:14,0:13:9.01:0,9,110	0/0:5,0:5:3:0,3,26
chr10	65565144	.	T	TA	953.03	PASS	AB=0.962;AC=12;AF=0.214;AN=56;BaseQRankSum=0.591;DP=355;FS=2.938;HRun=9;HaplotypeScore=49.0948;InbreedingCoeff=0.8475;MQ=72.97;MQ0=0;MQRankSum=-0.722;QD=11.62;ReadPosRankSum=0.331;VQSLOD=2.4622;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:28:64.75:0,65,526	0/0:3,0:3:9:0,9,78	0/0:18,0:15:41.73:0,42,328	0/0:17,0:16:23.45:0,23,181	0/0:17,0:17:44.96:0,45,386	0/0:9,0:9:20.98:0,21,182	0/0:11,0:11:26.98:0,27,230	1/1:7,16:23:48.10:519,48,0	0/0:13,0:13:35.90:0,36,300	1/1:10,0:10:23.12:124,23,0	1/1:11,0:11:26.61:178,27,0	0/1:11,1:12:0.24:0,0,218	0/0:7,0:7:20.74:0,21,168	0/0:5,0:5:12:0,12,104	0/0:13,0:13:35.99:0,36,312	1/1:14,0:14:29.43:184,29,0	0/0:18,0:18:38.94:0,39,328	1/1:10,0:9:17.76:118,18,0	0/0:13,0:13:29.97:0,30,255	0/0:5,0:5:12.88:0,13,106	0/0:23,0:23:14.61:0,15,285	0/1:2,0:2:0:0,0,0	0/0:7,0:7:14.97:0,15,126	0/0:10,0:10:23.97:0,24,204	0/0:15,0:15:35.62:0,36,275	0/0:18,0:18:5.32:0,5,287	0/0:17,0:17:35.99:0,36,312	0/0:6,0:6:14.97:0,15,125
chr10	65565148	.	A	AT	1331.05	PASS	AB=0.947;AC=10;AF=0.179;AN=56;BaseQRankSum=-1.793;DP=353;FS=1.255;HRun=0;HaplotypeScore=51.8758;InbreedingCoeff=0.7085;MQ=74.82;MQ0=1;MQRankSum=-0.491;QD=15.66;ReadPosRankSum=1.455;VQSLOD=5.0710;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:72.15:0,72,943	0/0:3,0:3:9.03:0,9,125	0/0:19,0:16:44.61:0,45,545	0/0:22,0:17:28.37:0,28,338	0/0:16,0:16:48.12:0,48,648	0/0:10,0:10:27.05:0,27,341	0/0:10,0:10:30.09:0,30,401	0/1:21,0:21:33.34:33,0,55	0/0:13,0:13:39.12:0,39,523	1/1:3,9:12:27.06:361,27,0	1/1:1,9:10:30.03:390,30,0	0/0:11,0:11:26.72:0,27,412	0/0:7,0:7:21.07:0,21,288	0/0:5,0:5:12.04:0,12,168	0/0:12,0:12:36.12:0,36,503	1/1:0,14:14:30.10:428,30,0	0/0:18,0:18:51.12:0,51,643	1/1:0,11:10:18.06:252,18,0	0/0:11,0:11:33.11:0,33,447	0/0:5,0:5:15.04:0,15,194	0/0:20,0:20:46.36:0,46,581	0/0:2,0:2:5.96:0,6,45	0/0:8,0:8:21.05:0,21,262	0/0:11,0:11:29.65:0,30,386	0/0:14,0:14:36.12:0,36,478	0/1:15,2:17:34.29:34,0,548	0/0:17,0:17:45.12:0,45,582	0/0:6,0:6:15.05:0,15,208
chr10	65565194	.	T	TTA	3511.25	PASS	AB=0.657;AC=38;AF=0.679;AN=56;BaseQRankSum=-4.293;DP=344;FS=32.258;HRun=0;HaplotypeScore=47.2366;InbreedingCoeff=0.5519;MQ=78.65;MQ0=4;MQRankSum=-1.169;QD=16.33;ReadPosRankSum=1.630;VQSLOD=1.6211;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:37.78:0,38,258	1/1:0,0:5:14.80:97,15,0	0/0:31,0:16:7.35:0,7,168	0/0:31,0:11:2.76:0,3,46	0/0:18,0:18:29.53:0,30,329	1/1:4,1:13:3.21:117,3,0	1/1:8,0:9:17.93:160,18,0	1/1:24,0:28:26.33:430,26,0	1/1:2,0:2:6:53,6,0	1/1:9,1:13:35.76:329,36,0	1/1:10,0:12:26.85:334,27,0	1/1:6,1:7:20.98:203,21,0	0/0:8,0:8:17.32:0,17,104	1/1:0,7:7:6.02:92,6,0	0/1:1,5:6:7.80:40,0,8	1/1:4,0:4:12.01:118,12,0	0/1:5,9:18:1.03:134,0,1	0/1:12,0:12:11.77:103,0,12	1/1:1,6:7:6.90:178,7,0	1/1:1,1:7:6.80:154,7,0	1/1:1,5:6:3.90:46,4,0	1/1:0,5:6:8.97:97,9,0	0/0:6,0:6:17.92:0,18,145	0/0:15,0:15:44.86:0,45,424	1/1:1,11:14:2.08:139,2,0	1/1:1,10:13:32.83:338,33,0	1/1:1,12:17:20.10:267,20,0	0/1:2,5:8:3.17:83,0,3
chr10	65566006	.	TTTCCTTCCTTCC	T	150.03	PASS	AB=0.933;AC=7;AF=0.159;AN=44;BaseQRankSum=-2.282;DP=298;FS=9.928;HRun=0;HaplotypeScore=99.6101;InbreedingCoeff=0.4489;MQ=68.30;MQ0=12;MQRankSum=1.748;QD=3.49;ReadPosRankSum=3.124;VQSLOD=0.9746;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:14:6.02:93,6,0	0/0:3,0:3:5.99:0,6,53	./.	./.	1/1:9,0:9:3.01:52,3,0	0/0:13,0:13:15.05:0,15,348	0/0:11,0:8:8.89:0,9,64	./.	0/0:3,0:2:3.01:0,3,119	0/0:15,0:14:18.02:0,18,374	0/0:11,0:11:3.01:0,3,50	0/0:10,0:9:3.01:0,3,48	./.	0/0:13,0:12:15.04:0,15,342	0/0:16,0:15:30:0,30,684	0/0:16,0:16:22.86:0,23,260	0/0:17,0:17:18.03:0,18,292	0/0:11,0:11:3.01:0,3,79	0/1:13,0:12:16.65:17,0,74	0/0:11,0:11:11.96:0,12,247	0/0:14,0:13:12.45:0,12,135	0/0:10,0:10:18:0,18,255	./.	1/1:6,0:6:8.75:105,9,0	0/0:8,0:8:6.01:0,6,129	0/0:9,0:9:15.04:0,15,297	0/0:11,0:10:14.96:0,15,244	./.
chr10	65566301	.	A	AT	1095.11	PASS	AB=0.955;AC=10;AF=0.179;AN=56;BaseQRankSum=-4.204;DP=421;FS=7.089;HRun=10;HaplotypeScore=43.9571;InbreedingCoeff=0.6836;MQ=74.02;MQ0=0;MQRankSum=-0.336;QD=14.04;ReadPosRankSum=-0.847;VQSLOD=2.7497;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:31:76.89:0,77,615	0/0:1,0:1:3:0,3,25	0/1:11,0:11:3:3,0,68	0/0:15,0:15:4.88:0,5,80	0/0:15,0:15:32.91:0,33,270	0/0:14,0:14:20.92:0,21,172	0/0:11,0:12:31.98:0,32,249	0/0:28,1:29:36.87:0,37,505	0/0:14,0:14:38.95:0,39,320	1/1:4,9:13:24.06:255,24,0	1/1:0,14:14:39.06:404,39,0	0/0:22,0:22:47.89:0,48,394	0/0:13,0:14:34.94:0,35,270	0/0:12,0:12:32.94:0,33,268	0/0:15,0:15:41.92:0,42,340	1/1:1,14:15:5.43:263,5,0	0/0:24,0:24:68.52:0,69,552	1/1:2,13:15:30.08:319,30,0	0/0:16,1:18:15.27:0,15,315	0/0:6,0:7:17:0,17,127	0/0:20,1:21:41.92:0,42,342	0/0:5,0:5:14.96:0,15,120	0/0:6,0:6:5.95:0,6,49	0/0:27,0:27:68.88:0,69,566	0/1:9,1:10:4.99:5,0,168	0/0:21,0:21:41.11:0,41,321	0/0:17,0:17:35.93:0,36,295	0/0:3,0:3:8.99:0,9,74
chr10	65566726	.	A	AT	1902.36	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-8.907;DP=618;FS=0.000;HRun=9;HaplotypeScore=58.3730;InbreedingCoeff=0.9536;MQ=79.47;MQ0=2;MQRankSum=-0.396;QD=22.92;ReadPosRankSum=-0.314;VQSLOD=4.1452;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:62.98:0,63,544	0/0:7,0:7:17.99:0,18,156	0/0:26,0:26:33.11:0,33,322	0/0:13,0:10:20.81:0,21,167	0/0:37,0:37:89.92:0,90,770	0/0:18,0:18:41.98:0,42,365	0/0:26,0:26:71.96:0,72,621	0/0:23,0:24:56.02:0,56,475	0/0:13,0:13:35.99:0,36,312	1/1:5,27:32:78.20:849,78,0	1/1:2,18:20:54.11:583,54,0	0/0:25,0:25:65.97:0,66,570	0/0:14,0:14:29.99:0,30,260	0/0:22,0:22:62.98:0,63,547	0/0:33,0:33:83.93:0,84,721	1/1:3,12:18:35.74:350,36,0	0/0:20,0:20:53.99:0,54,469	1/1:4,9:13:4.03:272,4,0	0/0:18,0:18:38.99:0,39,339	0/0:25,0:25:71.98:0,72,625	0/0:20,0:20:59.99:0,60,521	0/0:18,0:18:50.99:0,51,443	0/0:30,0:30:80.98:0,81,703	0/0:18,0:18:47.99:0,48,417	0/0:29,0:29:80.95:0,81,696	0/0:28,0:28:74.98:0,75,651	0/0:35,0:35:86.95:0,87,753	0/0:13,0:13:35.97:0,36,308
chr10	65567388	.	C	CT	7060.18	PASS	AB=0.862;AC=32;AF=0.571;AN=56;BaseQRankSum=3.393;DP=572;FS=2.421;HRun=9;HaplotypeScore=76.7261;InbreedingCoeff=0.6843;MQ=71.37;MQ0=1;MQRankSum=1.863;QD=21.46;ReadPosRankSum=1.519;VQSLOD=5.7268;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:26:77.98:0,78,677	0/1:2,6:8:5:178,0,5	0/1:15,0:14:16.27:16,0,124	0/1:12,0:10:8.05:8,0,52	0/0:31,0:31:86.96:0,87,751	1/1:5,13:18:16.08:405,16,0	1/1:4,17:21:22.08:472,22,0	0/0:36,0:35:62.73:0,63,654	0/0:19,0:19:47.96:0,48,413	0/0:34,0:35:64.94:0,65,553	0/0:14,0:14:32.48:0,32,283	1/1:2,8:10:1.04:239,1,0	0/0:17,0:17:47.97:0,48,412	1/1:1,13:14:39.11:431,39,0	1/1:3,19:23:53.98:578,54,0	0/0:17,1:18:14.81:0,15,357	1/1:5,21:26:34.11:604,34,0	0/0:18,0:18:35.99:0,36,312	1/1:4,21:25:63.17:695,63,0	1/1:3,24:28:48.98:751,49,0	1/1:1,9:10:24.06:266,24,0	1/1:5,9:14:21.06:232,21,0	0/0:27,0:28:65.02:0,65,553	0/1:11,2:14:31.33:31,0,205	1/1:2,27:30:32.55:763,33,0	1/1:7,18:25:5.05:512,5,0	1/1:4,14:19:38.94:412,39,0	1/1:2,14:16:42.11:465,42,0
chr10	65567421	.	CTATTT	C	256.72	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=1.615;DP=511;FS=0.000;HRun=0;HaplotypeScore=144.3731;InbreedingCoeff=0.8869;MQ=71.70;MQ0=0;MQRankSum=-3.156;QD=25.67;ReadPosRankSum=0.951;VQSLOD=3.0734;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:45.02:0,45,1062	0/0:5,0:5:9.03:0,9,216	0/0:14,0:13:21.07:0,21,481	0/0:17,0:13:13.38:0,13,380	0/0:25,0:25:51.16:0,51,1495	0/0:18,0:18:48.15:0,48,1111	0/0:18,0:18:42.14:0,42,968	0/0:22,0:22:54.18:0,54,1531	0/0:17,0:17:45.15:0,45,1270	0/0:24,0:24:39.13:0,39,890	0/0:16,0:16:39.13:0,39,919	0/0:12,0:12:33.11:0,33,735	0/0:16,0:16:33.10:0,33,903	0/0:13,0:13:33.11:0,33,806	0/0:28,0:28:75.26:0,75,1776	0/0:16,0:16:39.13:0,39,936	0/0:22,0:22:45.14:0,45,993	1/1:3,7:10:18.06:347,18,0	0/0:24,0:24:51.16:0,51,1065	0/0:26,0:26:60.21:0,60,1404	0/0:10,0:10:12.04:0,12,290	0/0:12,0:12:30.10:0,30,733	0/0:20,0:20:48.12:0,48,1277	0/0:16,0:16:42.14:0,42,1208	0/0:28,0:28:51.65:0,52,1198	0/0:22,0:22:51.17:0,51,1156	0/0:20,0:20:48.16:0,48,1116	0/0:18,0:18:45.15:0,45,1097
chr10	65571029	.	G	GAAA	6697.92	PASS	AB=0.628;AC=39;AF=0.696;AN=56;BaseQRankSum=-4.339;DP=511;FS=0.000;HRun=14;HaplotypeScore=86.8712;InbreedingCoeff=0.7261;MQ=71.06;MQ0=2;MQRankSum=-1.348;QD=17.49;ReadPosRankSum=-2.450;VQSLOD=3.2803;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:1,0:21:52.74:0,53,328	1/1:2,7:10:21.02:303,21,0	0/0:23,0:14:19.11:0,19,167	0/0:14,0:11:6.47:0,6,50	0/0:6,0:22:36.58:0,37,249	1/1:2,6:16:24.01:309,24,0	1/1:1,7:13:22.22:266,22,0	1/1:7,1:30:66.23:574,66,0	0/1:6,0:19:19.38:19,0,73	1/1:9,0:29:25.46:89,25,0	0/1:8,1:15:65.50:126,0,65	1/1:2,8:14:15.01:192,15,0	0/0:15,0:16:34.39:0,34,340	1/1:3,7:12:24.05:362,24,0	1/1:3,12:19:24.04:347,24,0	0/1:9,0:25:3.15:3,0,98	1/1:1,1:12:16.23:165,16,0	1/1:4,1:18:17.20:97,17,0	1/1:6,14:22:45.06:651,45,0	1/1:2,11:18:49.28:666,49,0	1/1:7,3:11:3.01:52,3,0	1/1:3,7:11:24.03:313,24,0	0/0:11,0:14:23.62:0,24,212	0/0:14,0:17:40.62:0,41,406	1/1:6,6:21:42.05:570,42,0	1/1:5,8:16:34.25:447,34,0	1/1:4,4:20:34.73:428,35,0	1/1:7,19:31:45.13:716,45,0
chr10	65571722	.	G	GCAGTTTTATTCTTC	56940.03	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-9.946;DP=694;FS=2.195;HRun=0;HaplotypeScore=197.0854;InbreedingCoeff=0.9893;MQ=84.84;MQ0=0;MQRankSum=-18.224;QD=125.42;ReadPosRankSum=2.696;VQSLOD=5.0749;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:96.33:0,96,3756	1/1:4,8:12:36.12:2116,36,0	0/0:35,0:35:99:0,99,3221	0/0:25,0:25:64.74:0,65,2029	0/0:25,0:25:69.22:0,69,2841	1/1:5,16:33:63.22:4077,63,0	1/1:5,5:18:26.60:1636,27,0	0/0:41,0:41:99:0,117,4373	0/0:18,0:18:51.18:0,51,2112	1/1:6,13:34:90.28:4722,90,0	1/1:5,10:21:45.15:2399,45,0	1/1:4,8:23:35.76:2296,36,0	0/0:25,0:25:72.23:0,72,2861	1/1:5,13:25:51.18:3429,51,0	1/1:10,12:33:66.22:3653,66,0	1/1:10,17:38:81.28:5024,81,0	1/1:3,4:12:20.99:1243,21,0	1/1:5,0:5:9.03:436,9,0	1/1:4,6:17:48.16:2307,48,0	1/1:7,14:32:63.22:3774,63,0	1/1:3,4:14:27.09:1478,27,0	1/1:3,20:34:74.77:4640,75,0	0/0:16,0:16:45.14:0,45,1736	0/0:22,0:22:66.23:0,66,2602	1/1:1,13:25:42.14:2825,42,0	1/1:9,13:38:99:5257,99,0	1/1:7,15:30:69.24:4349,69,0	1/1:5,2:8:21.07:1280,21,0
chr10	65574588	.	GA	G	9613.66	PASS	AB=0.563;AC=29;AF=0.518;AN=56;BaseQRankSum=12.218;DP=576;FS=3.086;HRun=3;HaplotypeScore=54.1674;InbreedingCoeff=0.9004;MQ=84.36;MQ0=0;MQRankSum=-0.186;QD=33.15;ReadPosRankSum=3.694;VQSLOD=5.1475;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:48.16:0,48,691	1/1:0,5:5:12.04:149,12,0	0/0:18,0:18:45.06:0,45,672	0/0:19,0:19:51.08:0,51,663	0/0:37,0:37:99:0,108,1530	1/1:2,21:23:57.18:707,57,0	1/1:0,19:19:51.16:632,51,0	0/0:26,0:26:78.25:0,78,1095	0/0:21,0:21:63.19:0,63,887	0/0:27,0:27:81.24:0,81,1104	0/0:23,0:23:60.19:0,60,845	1/1:1,22:23:60.19:740,60,0	0/0:29,0:29:87.28:0,87,1232	1/1:0,18:18:51.16:632,51,0	1/1:0,23:23:69.22:855,69,0	0/0:13,0:13:39.13:0,39,561	1/1:0,10:10:30.09:372,30,0	0/0:17,0:17:48.14:0,48,667	1/1:1,15:16:48.15:592,48,0	1/1:0,33:33:99:1220,99,0	1/1:1,28:29:75.24:930,75,0	1/1:0,18:18:51.16:630,51,0	0/0:24,0:24:72.23:0,72,1012	0/0:16,0:16:48.15:0,48,675	1/1:0,19:19:51.16:632,51,0	0/1:6,21:27:97.45:706,0,97	1/1:1,22:23:63.20:781,63,0	1/1:0,4:4:3.01:37,3,0
chr10	65576451	.	T	TA	1315.32	PASS	AC=48;AF=1.000;AN=48;DP=120;FS=0.000;HRun=1;HaplotypeScore=112.5772;InbreedingCoeff=0.0300;MQ=29.10;MQ0=0;QD=10.96;VQSLOD=1.6781;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,5:5:12.07:72,12,0	1/1:0,2:2:4.40:18,4,0	./.	./.	1/1:0,4:4:9.73:58,10,0	1/1:0,8:8:14.71:53,15,0	1/1:0,4:4:7.97:40,8,0	1/1:0,3:3:4.16:16,4,0	1/1:0,4:4:11.66:69,12,0	1/1:0,7:7:18.43:122,18,0	1/1:0,5:5:12.97:73,13,0	1/1:0,6:6:10.66:45,11,0	1/1:0,2:2:5.86:37,6,0	1/1:0,11:11:24.55:122,25,0	1/1:0,3:3:4.59:15,5,0	1/1:0,8:8:17.60:113,18,0	1/1:0,3:3:8.29:47,8,0	1/1:1,3:4:8.01:52,8,0	1/1:0,3:3:8.52:46,9,0	1/1:0,10:10:24.23:112,24,0	1/1:0,1:1:2.50:9,2,0	1/1:0,7:7:17.10:80,17,0	1/1:0,1:1:2.84:14,3,0	./.	1/1:0,9:9:19.90:87,20,0	1/1:0,4:4:7.61:42,8,0	1/1:0,6:6:10.86:49,11,0	./.
chr10	65576457	.	C	CA	2142.78	PASS	AC=48;AF=1.000;AN=48;DP=127;FS=0.000;HRun=0;HaplotypeScore=115.2293;InbreedingCoeff=-0.0305;MQ=29.00;MQ0=0;QD=16.87;VQSLOD=5.4104;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,5:5:15:141,15,0	1/1:0,2:2:5.47:29,5,0	./.	./.	1/1:1,4:5:11.04:96,11,0	1/1:0,8:8:17.80:92,18,0	1/1:1,4:5:8.81:60,9,0	1/1:1,3:4:9.61:69,10,0	1/1:0,4:4:11.96:95,12,0	1/1:1,7:8:19.20:168,19,0	1/1:0,5:5:14.19:103,14,0	1/1:0,6:6:11.70:72,12,0	1/1:0,2:2:5.99:51,6,0	1/1:1,11:12:30.11:207,30,0	1/1:0,3:3:5.59:26,6,0	1/1:0,8:8:18.44:154,18,0	1/1:0,3:3:8.99:77,9,0	1/1:2,3:5:8.91:77,9,0	1/1:0,3:3:8.93:67,9,0	1/1:0,10:10:27.84:171,28,0	1/1:0,1:1:2.90:16,3,0	1/1:0,7:7:19.26:120,19,0	1/1:1,1:2:5.97:47,6,0	./.	1/1:0,9:9:24.15:137,24,0	1/1:0,4:4:10.24:65,10,0	1/1:0,6:6:12.99:77,13,0	./.
chr10	65576461	.	ACCCT	A	5042.71	PASS	AB=1.000;AC=47;AF=0.979;AN=48;BaseQRankSum=2.706;DP=132;FS=0.000;HRun=0;HaplotypeScore=113.5480;InbreedingCoeff=0.2011;MQ=28.64;MQ0=4;MQRankSum=-1.193;QD=38.20;ReadPosRankSum=2.689;VQSLOD=4.6994;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,2:5:12.57:114,13,0	1/1:1,1:2:6.02:92,6,0	./.	./.	1/1:3,2:5:7.79:93,8,0	1/1:0,8:8:15.81:339,16,0	1/1:2,3:5:10.92:168,11,0	1/1:3,3:5:11.46:152,11,0	1/1:0,4:4:12.04:169,12,0	1/1:0,7:8:21.05:326,21,0	1/1:1,4:5:15.05:206,15,0	1/1:2,5:6:7.76:208,8,0	1/1:1,1:2:4.56:43,5,0	1/1:3,9:12:31.68:475,32,0	1/1:0,3:3:8.96:117,9,0	1/1:2,6:8:23.55:288,24,0	1/1:2,1:3:9.03:135,9,0	1/1:4,2:5:8.39:98,8,0	1/1:0,3:3:9.03:165,9,0	1/1:0,10:10:30.10:517,30,0	1/1:1,0:1:3.01:53,3,0	1/1:0,7:7:21.07:370,21,0	0/1:2,0:2:0.27:0,0,4	./.	1/1:2,7:9:27.09:436,27,0	1/1:2,3:4:12.04:185,12,0	1/1:0,6:6:18.06:292,18,0	./.
chr10	65576463	.	CCTCCT	C	4558.29	PASS	AB=1.000;AC=42;AF=0.875;AN=48;BaseQRankSum=1.647;DP=135;FS=0.000;HRun=0;HaplotypeScore=118.8634;InbreedingCoeff=0.1285;MQ=28.52;MQ0=6;MQRankSum=-0.628;QD=34.27;ReadPosRankSum=3.586;VQSLOD=4.4107;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,0:5:1.93:61,2,0	1/1:1,1:2:6.02:93,6,0	./.	./.	0/1:6,0:5:2.77:63,0,3	1/1:8,0:8:16.80:326,17,0	1/1:5,1:6:11.46:152,11,0	0/1:6,0:5:3.66:139,0,4	1/1:4,0:4:12.04:151,12,0	1/1:8,0:8:21.02:288,21,0	1/1:4,1:5:15.01:183,15,0	1/1:6,1:6:4.22:170,4,0	0/1:2,0:2:2.12:34,0,2	1/1:10,2:12:24.32:443,24,0	1/1:4,0:3:9.02:134,9,0	1/1:7,1:8:23.93:255,24,0	1/1:1,2:3:9.03:149,9,0	0/1:6,0:5:4.45:60,0,4	1/1:3,0:3:9.02:116,9,0	1/1:10,0:10:30.10:456,30,0	1/1:0,1:1:3.01:55,3,0	1/1:7,0:7:21.07:292,21,0	0/0:2,0:2:5.10:0,5,22	./.	1/1:7,2:9:27.09:446,27,0	1/1:4,1:4:12.04:218,12,0	1/1:6,0:6:18.06:274,18,0	./.
chr10	65576465	.	TCC	T	3183.88	PASS	AB=1.000;AC=49;AF=0.942;AN=52;BaseQRankSum=3.777;DP=189;FS=0.000;HRun=3;HaplotypeScore=112.0997;InbreedingCoeff=0.1174;MQ=27.73;MQ0=8;MQRankSum=1.769;QD=17.03;ReadPosRankSum=4.169;VQSLOD=0.8880;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,1:5:14.92:124,15,0	1/1:3,0:3:5.98:59,6,0	./.	./.	1/1:11,2:11:15.65:113,16,0	1/1:8,0:8:20.21:187,20,0	1/1:4,2:6:8.97:83,9,0	1/1:8,2:8:19.09:117,19,0	1/1:6,0:6:15.89:171,16,0	1/1:13,0:13:7.90:202,8,0	1/1:5,0:5:15.02:172,15,0	1/1:9,0:8:11.05:128,11,0	1/1:3,1:4:9.66:73,10,0	1/1:14,1:14:32.75:290,33,0	1/1:5,0:4:6.45:51,6,0	1/1:10,1:11:23.37:235,23,0	1/1:6,0:6:8.22:41,8,0	1/1:7,3:7:11.06:105,11,0	0/1:6,0:5:14.31:81,0,14	1/1:12,0:12:30.74:265,31,0	1/1:1,0:1:3.01:32,3,0	1/1:8,0:8:21.03:226,21,0	1/1:3,1:2:4.77:24,5,0	0/0:2,0:2:0.47:0,0,1	1/1:10,0:10:26.71:255,27,0	1/1:8,0:6:11.84:86,12,0	1/1:6,0:6:16.68:121,17,0	1/1:2,0:2:5.83:33,6,0
chr10	65578387	.	AT	A	6810.03	PASS	AB=1.000;AC=39;AF=0.696;AN=56;BaseQRankSum=14.312;DP=429;FS=3.049;HRun=8;HaplotypeScore=78.7119;InbreedingCoeff=0.8978;MQ=67.53;MQ0=0;MQRankSum=0.602;QD=23.01;ReadPosRankSum=3.564;VQSLOD=5.6087;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:72.04:0,72,813	1/1:1,7:8:20.98:192,21,0	0/0:4,0:3:0:0,0,0	0/1:6,0:5:4.21:4,0,7	0/0:24,0:24:66.16:0,66,761	1/1:0,20:20:45.02:425,45,0	1/1:0,7:7:21.03:203,21,0	0/0:30,0:30:78.20:0,78,895	0/0:11,0:11:30.09:0,30,362	1/1:1,17:18:51.08:490,51,0	1/1:3,16:19:41.98:393,42,0	1/1:0,8:8:21.03:203,21,0	0/0:18,0:18:48.15:0,48,580	1/1:0,8:8:14.98:135,15,0	1/1:2,12:14:36.01:338,36,0	1/1:2,8:10:21.03:203,21,0	1/1:6,21:27:57.56:551,58,0	1/1:4,20:24:48.07:463,48,0	1/1:0,14:14:42.06:401,42,0	1/1:2,20:22:60.09:579,60,0	1/1:1,6:7:18.03:174,18,0	1/1:1,8:9:24.03:230,24,0	0/0:16,0:16:42.13:0,42,506	0/0:3,0:3:9.03:0,9,109	1/1:1,19:20:44.97:415,45,0	1/1:2,23:25:69.08:658,69,0	1/1:2,18:20:48.07:463,48,0	1/1:0,10:10:30.05:289,30,0
chr10	65578595	.	GCA	G	1186.03	PASS	AB=0.931;AC=22;AF=0.423;AN=52;BaseQRankSum=-0.981;DP=459;FS=5.128;HRun=0;HaplotypeScore=97.4928;InbreedingCoeff=-0.3806;MQ=59.00;MQ0=3;MQRankSum=1.282;QD=3.56;ReadPosRankSum=3.233;VQSLOD=1.7128;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,4:39:46.36:0,46,1102	0/1:4,0:4:26.37:26,0,42	./.	./.	0/0:15,0:15:26.98:0,27,344	0/1:17,0:17:5.83:6,0,167	0/1:16,1:17:36.12:36,0,155	1/1:17,0:25:13.66:68,14,0	1/1:6,7:13:12.03:139,12,0	0/1:22,0:22:30.35:90,0,30	0/1:14,0:14:6.34:22,0,6	0/1:14,2:17:84.64:85,0,99	0/1:15,2:17:33.59:34,0,375	0/0:13,0:13:11.58:0,12,220	0/1:8,4:12:77.41:91,0,77	0/1:11,0:11:10.37:10,0,39	0/1:17,3:21:99:128,0,114	0/1:30,4:34:99:119,0,320	0/1:9,1:10:45.46:45,0,59	0/1:8,0:7:10.82:55,0,11	0/1:35,1:36:99:129,0,270	0/0:3,0:3:5.99:0,6,51	0/0:9,0:9:21.04:0,21,282	0/0:24,1:25:28.36:0,28,839	0/1:7,1:8:27.54:74,0,28	0/1:13,0:13:6.79:7,0,112	0/1:11,2:13:18.50:93,0,19	0/1:20,1:21:10.26:87,0,10
chr10	65578619	.	A	ACG	1146.44	PASS	AB=0.920;AC=19;AF=0.352;AN=54;BaseQRankSum=3.310;DP=474;FS=1.588;HRun=0;HaplotypeScore=121.2648;InbreedingCoeff=-0.2438;MQ=56.59;MQ0=9;MQRankSum=1.366;QD=3.81;ReadPosRankSum=-6.565;VQSLOD=-0.5878;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:44:99:0,111,1366	0/1:4,0:4:10.76:11,0,17	0/0:5,0:1:0:0,0,0	./.	0/0:15,0:15:41.97:0,42,477	0/1:23,0:22:62.70:70,0,63	0/1:20,0:20:48.12:90,0,48	0/0:19,0:18:43.27:0,43,326	0/0:10,0:10:14.86:0,15,103	0/1:11,12:23:7.25:199,0,7	0/1:5,10:14:10.62:119,0,11	0/1:16,0:16:33.64:34,0,34	0/0:14,0:14:39.01:0,39,476	0/0:16,0:16:7.83:0,8,99	0/1:14,0:14:25.09:55,0,25	0/1:3,7:10:31.49:95,0,31	0/1:19,1:20:63.43:100,0,63	0/1:35,0:35:79.07:79,0,137	0/1:17,0:14:25.73:26,0,29	1/1:9,0:8:1.57:60,2,0	0/1:45,0:44:74.16:211,0,74	0/0:2,0:2:5.50:0,5,25	0/0:8,0:8:21.04:0,21,273	0/0:30,0:30:90.10:0,90,1115	0/1:9,0:9:0.26:57,0,0	0/1:13,0:13:39.52:44,0,40	0/1:12,0:12:28.03:35,0,28	1/1:16,0:15:1.62:14,2,0
chr10	65583043	.	C	CT	475.84	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=-4.067;DP=444;FS=5.168;HRun=12;HaplotypeScore=51.1126;InbreedingCoeff=0.7020;MQ=63.88;MQ0=4;MQRankSum=-0.492;QD=13.60;ReadPosRankSum=-3.668;VQSLOD=2.5255;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:64.55:0,65,460	0/0:10,0:10:26.82:0,27,197	0/1:6,0:3:0:0,0,0	0/0:10,0:8:11.63:0,12,91	0/0:21,1:23:17.91:0,18,281	0/0:16,0:16:44.72:0,45,325	0/0:12,0:12:29.75:0,30,214	1/1:7,22:29:60.06:570,60,0	0/0:12,0:12:23.82:0,24,172	0/0:17,0:18:37.78:0,38,266	0/0:22,0:22:57.12:0,57,414	0/0:5,0:5:14.83:0,15,104	0/0:13,1:14:5.85:0,6,195	0/0:10,0:11:28.83:0,29,198	0/0:14,0:15:34.84:0,35,247	0/0:10,0:10:26.84:0,27,197	0/0:19,0:20:49.63:0,50,348	0/0:16,0:16:32.72:0,33,241	0/0:25,0:25:34.97:0,35,367	0/0:13,0:13:32.81:0,33,241	0/0:7,0:7:20.88:0,21,153	0/0:4,0:4:2.96:0,3,22	0/0:15,0:15:32.78:0,33,241	0/0:11,0:10:16.03:0,16,146	0/0:15,0:16:40.80:0,41,289	0/0:25,0:24:56.63:0,57,413	0/0:28,0:28:62.51:0,63,457	0/0:20,0:19:56.68:0,57,416
chr10	65583300	.	T	TC	9109.01	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-13.887;DP=464;FS=0.368;HRun=0;HaplotypeScore=44.8657;InbreedingCoeff=0.9920;MQ=72.85;MQ0=0;MQRankSum=-0.488;QD=35.72;ReadPosRankSum=2.816;VQSLOD=4.2165;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:78.17:0,78,1040	1/1:0,6:6:17.91:202,18,0	0/0:20,0:17:40.44:0,40,351	0/0:15,0:12:20.95:0,21,266	0/0:23,0:23:60.20:0,60,834	1/1:1,20:20:45.14:628,45,0	1/1:0,15:15:39.13:544,39,0	0/0:22,0:22:66.11:0,66,805	0/0:11,0:11:33.06:0,33,423	0/0:15,0:15:44.68:0,45,547	0/0:15,0:15:45.12:0,45,582	1/1:1,12:13:33.10:460,33,0	0/0:9,0:9:20.88:0,21,314	1/1:0,15:15:42.14:581,42,0	1/1:0,16:16:42.14:586,42,0	0/0:10,0:10:30.09:0,30,404	1/1:1,21:22:47.66:704,48,0	0/0:11,0:11:13.23:0,13,396	1/1:0,23:24:66.17:898,66,0	1/1:0,14:14:42.02:539,42,0	1/1:0,17:17:45.15:628,45,0	1/1:0,5:5:15.05:209,15,0	0/0:11,0:11:33.10:0,33,444	0/0:21,0:21:60.19:0,60,820	1/1:0,19:19:36.12:502,36,0	1/1:0,23:23:69.19:914,69,0	1/1:0,30:30:78.26:1087,78,0	1/1:0,15:15:45.15:627,45,0
chr10	65584814	.	A	AAATT	19922.45	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-16.456;DP=622;FS=0.308;HRun=0;HaplotypeScore=84.2453;InbreedingCoeff=0.9941;MQ=66.68;MQ0=1;MQRankSum=-5.495;QD=62.65;ReadPosRankSum=1.907;VQSLOD=6.8306;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:87.30:0,87,1586	1/1:1,10:11:33.11:856,33,0	0/0:18,0:18:36.10:0,36,577	0/0:6,0:6:12.04:0,12,213	0/0:38,0:38:99:0,108,1929	1/1:3,15:18:45.15:1172,45,0	1/1:1,10:11:24.08:629,24,0	0/0:23,0:23:57.19:0,57,990	0/0:26,0:26:69.24:0,69,1255	0/0:26,0:26:78.26:0,78,1364	0/0:31,0:31:90.29:0,90,1593	1/1:3,16:19:48.16:1260,48,0	0/0:22,0:22:63.22:0,63,1149	1/1:4,24:28:72.25:1880,72,0	1/1:1,26:27:66.23:1732,66,0	0/0:20,0:20:57.18:0,57,1009	1/1:2,18:21:54.19:1407,54,0	0/0:20,0:20:59.69:0,60,1022	1/1:7,12:20:42.13:1003,42,0	1/1:12,25:38:78.23:1933,78,0	1/1:1,6:8:18.06:453,18,0	1/1:1,9:10:30.10:703,30,0	0/0:28,0:28:81.27:0,81,1438	0/0:15,0:15:45.13:0,45,777	1/1:4,29:33:84.29:2169,84,0	1/1:3,22:28:81.28:2012,81,0	1/1:8,23:30:78.27:2004,78,0	1/1:3,11:14:27.09:709,27,0
chr10	65585140	.	A	AT	1453.06	PASS	AB=0.889;AC=9;AF=0.161;AN=56;BaseQRankSum=-6.928;DP=520;FS=1.153;HRun=9;HaplotypeScore=51.1674;InbreedingCoeff=0.8649;MQ=74.95;MQ0=0;MQRankSum=-0.001;QD=17.94;ReadPosRankSum=-2.406;VQSLOD=2.9353;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:71.95:0,72,624	0/0:8,0:8:20.98:0,21,178	0/0:12,0:13:23.50:0,23,157	0/0:15,0:15:28.43:0,28,258	0/0:20,0:20:53.97:0,54,464	0/1:14,2:16:24.37:24,0,271	0/0:11,0:11:32.99:0,33,286	0/0:33,0:34:68:0,68,577	0/0:23,0:23:53.98:0,54,469	1/1:3,16:18:39.11:431,39,0	1/1:0,16:16:39.06:418,39,0	0/0:21,0:21:59.97:0,60,517	0/0:20,0:20:53.99:0,54,469	0/0:18,0:18:47.98:0,48,417	0/0:21,0:21:62.99:0,63,547	1/1:1,16:18:47.96:512,48,0	0/0:18,0:18:53.97:0,54,464	1/1:2,10:12:21.06:232,21,0	0/0:18,0:19:44.01:0,44,371	0/0:19,0:19:50.98:0,51,442	0/0:18,0:18:47.97:0,48,413	0/0:13,0:13:26.98:0,27,234	0/0:16,0:16:35.97:0,36,312	0/0:15,0:15:38.99:0,39,339	0/0:17,0:17:41.98:0,42,364	0/0:33,0:33:69.46:0,69,780	0/0:20,0:20:47.96:0,48,417	0/0:17,0:17:50.99:0,51,442
chr10	65585454	.	T	TC	1134.02	PASS	AB=0.869;AC=19;AF=0.452;AN=42;BaseQRankSum=0.262;DP=253;FS=3.155;HRun=2;HaplotypeScore=32.4153;InbreedingCoeff=0.1963;MQ=31.18;MQ0=102;MQRankSum=-1.276;QD=6.44;ReadPosRankSum=0.182;VQSLOD=0.7552;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:4:3.90:0,4,41	1/1:0,1:1:3.01:42,3,0	./.	./.	./.	1/1:3,0:2:6:61,6,0	1/1:15,5:8:9.24:151,9,0	0/0:9,0:4:12:0,12,135	0/0:13,0:8:15.05:0,15,194	0/0:1,0:1:0.89:0,1,2	./.	0/0:9,2:6:6.12:0,6,20	0/0:6,0:3:6.02:0,6,79	0/1:11,2:5:0.76:56,0,1	0/1:7,6:11:55.93:203,0,56	0/1:7,3:7:30.90:31,0,109	1/1:13,12:17:10.73:488,11,0	0/1:27,0:13:2.18:2,0,304	0/1:6,2:5:25.14:96,0,25	./.	1/1:20,3:13:8.87:72,9,0	./.	0/1:3,0:2:0:0,0,0	0/1:25,1:12:20.64:21,0,269	./.	0/0:5,0:2:2.88:0,3,15	0/0:3,0:3:3.01:0,3,39	1/1:3,1:1:3.01:45,3,0
chr10	65585490	.	T	TC	175.42	PASS	AB=0.951;AC=6;AF=0.333;AN=18;BaseQRankSum=0.556;DP=127;FS=0.000;HRun=2;HaplotypeScore=21.2206;MQ=12.96;MQ0=95;MQRankSum=-0.652;QD=3.44;ReadPosRankSum=-1.096;VQSLOD=-0.4294;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	0/1:2,0:1:0:0,0,0	./.	./.	./.	1/1:5,0:1:2.97:20,3,0	./.	0/1:15,3:9:59.53:165,0,60	0/1:17,1:4:29.90:65,0,30	0/0:5,0:1:3.01:0,3,30	./.	0/1:8,0:2:0:0,0,0	0/0:2,0:1:0.47:0,0,1	./.	0/0:17,0:2:0:0,0,0	./.	0/0:2,0:1:3.01:0,3,36	./.	./.
chr10	65585733	.	TGC	T	55.52	PASS	AB=0.945;AC=11;AF=0.289;AN=38;BaseQRankSum=2.209;DP=760;FS=31.130;HRun=0;HaplotypeScore=21.8226;InbreedingCoeff=0.0556;MQ=9.84;MQ0=637;MQRankSum=-2.974;QD=0.76;ReadPosRankSum=-1.130;VQSLOD=-0.1175;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	1/1:6,1:2:3.01:43,3,0	./.	./.	0/1:12,0:2:0:0,0,0	./.	0/0:181,0:4:4.57:0,5,63	./.	0/0:27,0:5:12.04:0,12,214	0/1:17,0:3:7.08:7,0,52	./.	0/0:29,0:2:3.01:0,3,50	0/0:26,0:3:2.90:0,3,36	0/0:24,0:1:3.01:0,3,61	./.	0/0:20,0:2:3.01:0,3,61	0/0:59,0:4:6.02:0,6,113	0/0:52,0:4:6.02:0,6,115	0/0:9,0:2:3.01:0,3,58	1/1:2,2:4:2.89:25,3,0	0/0:109,0:6:2.99:0,3,50	0/1:11,1:5:33.49:33,0,49	./.	0/0:81,0:21:28.63:0,29,526	./.	1/1:13,0:1:2.37:8,2,0	0/1:4,0:3:14.52:15,0,54	0/1:3,1:2:34.21:34,0,53
chr10	65585739	.	TGC	T	150.92	PASS	AB=0.927;AC=12;AF=0.316;AN=38;BaseQRankSum=1.629;DP=677;FS=25.860;HRun=0;HaplotypeScore=22.5103;InbreedingCoeff=0.0424;MQ=10.36;MQ0=552;MQRankSum=-3.026;QD=1.52;ReadPosRankSum=-0.591;VQSLOD=-0.0850;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	1/1:7,0:2:3.01:43,3,0	./.	./.	0/1:12,0:2:0:0,0,0	./.	0/0:138,0:3:3.01:0,3,43	./.	0/0:27,0:5:11.07:0,11,181	0/1:16,1:3:32.64:33,0,36	./.	0/0:22,0:2:3.01:0,3,42	0/1:24,0:3:0:0,0,0	0/0:19,0:1:3.01:0,3,61	./.	0/0:18,1:2:3.01:0,3,61	0/0:54,0:5:0.53:0,1,104	0/0:41,0:4:6.01:0,6,65	0/0:8,0:2:3.01:0,3,40	1/1:4,0:4:3.01:33,3,0	0/0:102,0:6:2.99:0,3,42	0/1:11,2:5:21.73:33,0,22	./.	0/0:71,0:20:31.79:0,32,478	./.	1/1:14,1:1:3.01:49,3,0	0/1:2,1:3:33.98:34,0,54	0/1:4,0:2:35.24:36,0,35
chr10	65585742	.	CTCTG	C	89.16	PASS	AB=1.000;AC=13;AF=0.325;AN=40;BaseQRankSum=1.369;DP=651;FS=32.134;HRun=0;HaplotypeScore=29.2061;InbreedingCoeff=0.3763;MQ=11.12;MQ0=516;MQRankSum=-2.246;QD=1.19;ReadPosRankSum=-0.858;VQSLOD=0.2634;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	1/1:6,1:2:2.92:17,3,0	./.	./.	0/1:14,0:2:0:0,0,0	./.	0/0:120,0:3:2.98:0,3,22	./.	0/0:26,0:5:9.50:0,10,118	1/1:17,1:4:8.90:82,9,0	./.	0/0:20,0:2:3.01:0,3,31	0/0:21,0:3:0:0,0,0	0/0:17,0:1:3.01:0,3,53	./.	0/0:21,0:2:3.01:0,3,35	0/0:53,0:6:4.90:0,5,60	0/0:39,0:5:7.23:0,7,51	0/0:8,0:2:3.01:0,3,43	1/1:4,2:6:3.01:40,3,0	0/0:97,0:6:2.99:0,3,36	1/1:13,1:6:2.76:19,3,0	./.	0/0:69,0:20:20.22:0,20,287	1/1:12,1:7:0.29:1,0,0	0/0:16,0:2:2.60:0,3,10	0/0:3,0:3:1.46:0,1,34	1/1:2,1:2:1.25:39,1,0
chr10	65585902	.	C	CTG	105.75	PASS	AB=0.944;AC=8;AF=0.286;AN=28;BaseQRankSum=2.529;DP=819;FS=39.673;HRun=0;HaplotypeScore=20.0704;InbreedingCoeff=0.2256;MQ=15.76;MQ0=709;MQRankSum=-0.243;QD=0.87;ReadPosRankSum=1.167;VQSLOD=0.7744;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	./.	1/1:5,0:2:1.82:5,2,0	./.	./.	./.	0/0:66,1:15:11.71:0,12,176	./.	0/1:53,2:6:46.63:47,0,73	0/0:7,0:1:2.22:0,2,7	./.	./.	0/0:69,0:3:3.01:0,3,44	0/0:87,0:7:11.92:0,12,152	0/0:69,0:7:12.02:0,12,176	0/0:78,0:5:9.03:0,9,132	./.	1/1:19,1:3:3.01:55,3,0	./.	./.	./.	./.	./.	0/1:33,3:11:90.30:90,0,199	1/1:5,0:2:0.47:1,0,0	0/0:11,0:3:6.02:0,6,83	0/0:46,0:3:9.03:0,9,132	0/0:3,0:1:0.47:0,0,1
chr10	65585967	.	C	CCT	160.95	PASS	AB=0.875;AC=7;AF=0.219;AN=32;BaseQRankSum=3.438;DP=327;FS=3.938;HRun=0;HaplotypeScore=25.5230;InbreedingCoeff=0.3592;MQ=16.31;MQ0=154;MQRankSum=-2.269;QD=3.16;ReadPosRankSum=0.793;VQSLOD=0.7512;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	0/0:9,0:1:3.01:0,3,41	0/0:7,0:3:0:0,0,0	0/0:11,0:3:3.01:0,3,42	0/0:28,0:15:5.77:0,6,83	./.	0/0:16,0:3:6.02:0,6,83	0/0:5,0:1:2.97:0,3,20	./.	1/1:3,2:2:3.01:54,3,0	0/1:18,3:9:81.68:82,0,189	0/0:19,0:9:14.99:0,15,204	0/0:14,0:6:6:0,6,84	0/0:11,0:4:9.03:0,9,126	1/1:11,1:5:8.39:78,8,0	1/1:12,1:5:7.81:54,8,0	0/0:13,1:8:3.01:0,3,42	./.	./.	./.	./.	0/0:32,0:16:21.37:0,21,294	./.	0/0:12,0:4:3.01:0,3,42	./.	./.
chr10	65585979	.	TGC	T	51.74	PASS	AC=4;AF=0.167;AN=24;BaseQRankSum=2.450;DP=312;FS=0.000;HRun=0;HaplotypeScore=23.2724;InbreedingCoeff=0.4035;MQ=15.12;MQ0=180;MQRankSum=-1.657;QD=2.16;ReadPosRankSum=0.023;VQSLOD=0.7703;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	0/0:3,0:1:3.01:0,3,48	1/1:9,1:4:2.98:22,3,0	./.	0/0:22,0:3:3.01:0,3,35	./.	0/0:19,0:6:6.02:0,6,121	./.	./.	0/0:5,0:1:3.01:0,3,58	0/0:30,0:11:24.07:0,24,417	0/0:18,0:8:5.91:0,6,121	0/0:16,0:4:3:0,3,27	0/0:11,0:2:6.02:0,6,91	0/0:14,0:5:6.85:0,7,77	1/1:10,4:6:8.99:118,9,0	./.	./.	./.	./.	./.	0/0:29,0:16:14.73:0,15,226	./.	./.	./.	./.
chr10	65585981	.	C	CCT	125.78	PASS	AB=0.924;AC=6;AF=0.333;AN=18;BaseQRankSum=3.117;DP=312;FS=3.510;HRun=0;HaplotypeScore=24.0440;MQ=15.11;MQ0=180;MQRankSum=-1.180;QD=1.34;ReadPosRankSum=0.514;VQSLOD=0.9549;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	0/1:10,1:4:0:0,0,0	./.	1/1:24,0:5:2.93:19,3,0	./.	0/0:18,0:6:6.02:0,6,84	./.	./.	0/0:5,0:1:3.01:0,3,39	0/1:30,0:12:28.02:28,0,226	0/0:17,0:7:5.89:0,6,83	./.	./.	0/1:10,4:5:29.87:150,0,30	0/1:15,0:6:9.23:13,0,9	./.	./.	./.	./.	./.	0/0:29,0:16:9.67:0,10,129	./.	./.	./.	./.
chr10	65585999	.	TGC	T	243.90	PASS	AB=0.818;AC=3;AF=0.214;AN=14;BaseQRankSum=3.001;DP=338;FS=8.306;HRun=0;HaplotypeScore=26.1521;MQ=12.57;MQ0=210;MQRankSum=0.073;QD=6.78;ReadPosRankSum=2.220;VQSLOD=0.7295;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:6:3.01:0,3,45	./.	./.	./.	./.	./.	0/0:34,0:7:8.85:0,9,123	./.	0/0:23,1:9:8.92:0,9,109	./.	./.	./.	0/0:29,0:13:27.07:0,27,423	./.	./.	./.	0/1:14,4:5:25.93:132,0,26	1/1:14,4:5:12.04:195,12,0	./.	./.	./.	./.	./.	0/0:26,0:11:6.64:0,7,125	./.	./.	./.	./.
chr10	65586009	.	C	CCT	321.82	PASS	AB=0.929;AC=5;AF=0.250;AN=20;BaseQRankSum=2.619;DP=352;FS=12.018;HRun=0;HaplotypeScore=23.5450;InbreedingCoeff=0.6187;MQ=12.26;MQ0=223;MQRankSum=-0.636;QD=4.23;ReadPosRankSum=1.856;VQSLOD=0.1261;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:6:3:0,3,27	0/0:4,0:1:0:0,0,0	./.	./.	./.	./.	0/0:36,0:9:10.10:0,10,99	./.	0/0:24,0:8:6.02:0,6,83	./.	./.	./.	0/0:28,0:12:23.75:0,24,296	./.	./.	./.	1/1:16,4:4:12.04:197,12,0	1/1:13,4:5:12.04:215,12,0	./.	./.	0/1:36,2:5:0:0,0,0	./.	./.	0/0:31,0:13:14.99:0,15,169	./.	0/0:7,0:1:0:0,0,0	./.	./.
chr10	65586120	.	CTCTG	C	71.34	PASS	AB=0.871;AC=4;AF=0.087;AN=46;BaseQRankSum=3.056;DP=409;FS=0.000;HRun=0;HaplotypeScore=62.6567;InbreedingCoeff=0.1384;MQ=42.35;MQ0=111;MQRankSum=-1.883;QD=2.16;ReadPosRankSum=-1.318;VQSLOD=0.4988;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:20:44.27:0,44,623	./.	0/0:19,0:8:1.62:0,2,206	0/0:20,0:8:18.53:0,19,240	0/0:10,0:7:9.03:0,9,132	./.	0/0:15,0:5:7.24:0,7,55	0/0:19,0:14:21.07:0,21,311	0/0:23,0:20:54.18:0,54,793	0/1:9,1:2:9.79:44,0,10	./.	0/0:20,0:6:12.02:0,12,116	0/0:17,0:15:38.93:0,39,566	0/0:12,0:7:15.02:0,15,149	0/0:13,0:5:6:0,6,54	1/1:12,1:3:3.01:43,3,0	0/0:12,0:4:11.72:0,12,86	0/1:8,2:5:41.07:82,0,41	0/0:13,0:7:20:0,20,180	0/0:6,0:5:3.01:0,3,34	0/0:22,0:12:9:0,9,100	./.	0/0:10,0:3:2.98:0,3,22	0/0:48,0:45:99:0,112,1592	0/0:14,0:7:6.02:0,6,70	0/0:14,0:4:5.23:0,5,42	0/0:13,0:7:14.91:0,15,124	./.
chr10	65586123	.	TGCCTCC	T	131.68	PASS	AC=28;AF=0.609;AN=46;BaseQRankSum=9.419;DP=380;FS=21.919;HRun=0;HaplotypeScore=71.7955;InbreedingCoeff=0.6868;MQ=48.15;MQ0=77;MQRankSum=-4.813;QD=0.79;ReadPosRankSum=-1.057;VQSLOD=-0.1573;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:24:55.96:0,56,442	./.	0/0:22,0:10:11.47:0,11,132	0/0:21,0:8:18.34:0,18,140	0/0:5,4:8:8.94:0,9,69	./.	1/1:13,0:6:7.31:30,7,0	0/0:18,0:15:20.79:0,21,173	0/0:23,0:20:53.66:0,54,408	1/1:6,0:2:0.83:7,1,0	./.	1/1:17,0:6:6.22:15,6,0	0/0:17,0:15:35.69:0,36,270	1/1:13,0:8:7.77:19,8,0	1/1:14,0:5:6.05:26,6,0	1/1:10,0:3:2.22:7,2,0	1/1:12,0:4:7.67:42,8,0	1/1:8,0:5:12.05:73,12,0	1/1:12,0:7:11.15:28,11,0	1/1:6,0:5:1.16:3,1,0	1/1:21,0:13:4.25:11,4,0	./.	0/0:6,0:3:1.25:0,1,3	0/0:49,0:46:99:0,103,923	1/1:12,0:7:3.11:8,3,0	1/1:11,0:4:3.11:7,3,0	1/1:11,0:7:7.06:18,7,0	./.
chr10	65586171	.	TGC	T	356.27	PASS	AB=0.839;AC=8;AF=0.160;AN=50;BaseQRankSum=3.707;DP=456;FS=3.727;HRun=0;HaplotypeScore=98.2157;InbreedingCoeff=-0.0160;MQ=45.43;MQ0=47;MQRankSum=-2.941;QD=3.24;ReadPosRankSum=-2.387;VQSLOD=1.9444;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:36:96.28:0,96,1824	./.	0/0:37,0:8:20.96:0,21,312	0/1:46,1:16:14.53:15,0,195	0/0:4,0:4:9.03:0,9,183	./.	0/0:16,0:13:15.52:0,16,292	0/0:14,0:11:27.09:0,27,532	0/0:17,0:17:45.15:0,45,866	0/0:15,0:15:30.52:0,31,458	0/0:11,0:11:4.85:0,5,24	0/0:13,2:5:15.05:0,15,270	0/0:11,0:11:21.07:0,21,354	0/1:11,1:8:17.55:18,0,258	0/0:7,4:7:12.03:0,12,182	0/0:13,0:7:16.57:0,17,175	0/1:9,5:10:27.33:231,0,27	0/0:12,0:9:7.90:0,8,140	0/0:27,2:16:10.47:0,10,348	0/1:9,4:8:27.58:28,0,110	0/0:24,1:19:11.27:0,11,242	./.	0/0:6,0:5:12.04:0,12,232	0/0:48,0:47:99:0,129,2413	0/0:9,3:8:12.98:0,13,236	0/1:5,1:3:42.71:43,0,55	0/1:11,4:11:99:117,0,235	1/1:1,1:2:3.01:34,3,0
chr10	65586182	.	CTGCCTCTT	C	1105.92	PASS	AB=0.982;AC=17;AF=0.327;AN=52;BaseQRankSum=6.315;DP=454;FS=14.258;HRun=0;HaplotypeScore=134.7341;InbreedingCoeff=0.1049;MQ=51.61;MQ0=22;MQRankSum=-5.042;QD=5.14;ReadPosRankSum=0.745;VQSLOD=1.2959;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:34:86.94:0,87,2981	./.	0/0:39,0:16:24.89:0,25,476	0/1:52,0:20:28.34:28,0,227	0/0:5,0:5:15.04:0,15,449	0/0:6,0:4:3.01:0,3,35	0/1:19,0:16:17.91:18,0,100	0/0:17,0:15:36.11:0,36,985	0/0:15,0:15:36.07:0,36,981	0/1:13,2:16:0.37:524,0,0	1/1:7,6:13:6.02:92,6,0	0/0:14,0:6:5.22:0,5,59	0/0:11,0:11:23.97:0,24,514	0/1:11,0:7:30.05:30,0,55	0/0:11,0:7:1.99:0,2,17	1/1:8,0:6:6.58:196,7,0	0/0:14,0:11:6.44:0,6,131	1/1:7,4:11:17.98:246,18,0	0/1:23,0:14:43.16:44,0,43	0/0:10,0:7:3.01:0,3,41	0/1:25,0:20:29.28:29,0,97	./.	0/0:8,0:5:15.05:0,15,567	0/0:46,0:45:99:0,117,3797	0/1:12,0:10:9.12:9,0,89	0/1:6,0:5:11.97:12,0,106	0/1:15,0:11:13.35:13,0,114	1/1:2,0:2:2.97:20,3,0
chr10	65586189	.	T	TC	298.94	PASS	AB=0.917;AC=5;AF=0.096;AN=52;BaseQRankSum=4.132;DP=451;FS=14.763;HRun=1;HaplotypeScore=100.9835;InbreedingCoeff=0.6038;MQ=52.14;MQ0=21;MQRankSum=-4.805;QD=8.54;ReadPosRankSum=4.208;VQSLOD=-0.2680;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:33:90.16:0,90,1222	./.	0/0:38,0:13:32.66:0,33,418	0/0:48,0:17:27.56:0,28,275	0/0:6,0:6:18.06:0,18,252	0/0:6,0:4:2.84:0,3,14	0/0:18,0:15:20.54:0,21,107	0/0:18,0:16:42.14:0,42,581	0/0:15,0:15:36.09:0,36,482	1/1:5,9:17:12.51:242,13,0	0/0:6,6:13:3.45:0,3,22	0/0:14,0:6:11.77:0,12,77	0/0:11,0:10:24.08:0,24,332	0/0:11,0:7:14.72:0,15,95	0/0:9,0:6:8.92:0,9,62	1/1:1,5:6:13.83:111,14,0	0/0:16,0:13:28.08:0,28,175	0/1:10,1:10:7.50:65,0,7	0/0:21,0:10:17.55:0,18,106	0/0:11,0:8:8.52:0,9,47	0/0:24,0:22:25.19:0,25,136	./.	0/0:10,0:6:18.06:0,18,249	0/0:46,0:45:99:0,126,1703	0/0:13,0:11:15.30:0,15,86	0/0:6,0:5:10.78:0,11,45	0/0:16,0:12:28.89:0,29,183	0/0:2,0:2:0.89:0,1,2
chr10	65586190	.	T	TCTC	1025.19	PASS	AB=1.000;AC=12;AF=0.231;AN=52;BaseQRankSum=4.062;DP=460;FS=15.221;HRun=0;HaplotypeScore=110.1399;InbreedingCoeff=0.3998;MQ=51.77;MQ0=21;MQRankSum=-6.147;QD=10.36;ReadPosRankSum=2.842;VQSLOD=2.1927;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:34:90.14:0,90,1595	./.	0/0:39,0:13:32.77:0,33,497	0/0:53,0:17:22.72:0,23,350	0/0:6,0:6:18.06:0,18,331	0/0:6,0:4:2.96:0,3,25	0/0:19,0:15:20.15:0,20,176	0/0:18,0:16:42.14:0,42,749	0/0:15,0:15:39.05:0,39,646	1/1:8,9:17:50.13:702,50,0	1/1:7,6:13:1.95:5,2,0	0/0:17,0:9:12.02:0,12,121	0/0:11,0:10:24.08:0,24,424	0/0:11,0:7:14.76:0,15,131	0/0:9,0:6:9.02:0,9,94	1/1:2,5:6:17.93:257,18,0	0/1:16,0:13:37.06:37,0,55	1/1:10,1:10:6.71:112,7,0	0/0:21,0:10:17.98:0,18,154	0/0:11,0:8:2.57:0,3,9	0/0:25,0:22:22.66:0,23,206	./.	0/0:10,0:6:18.06:0,18,320	0/0:46,0:45:99:0,126,2183	0/1:13,0:11:28.99:29,0,110	0/1:6,0:5:10.92:11,0,74	0/1:16,0:12:23.92:24,0,191	0/0:2,0:2:2.92:0,3,17
chr10	65586223	.	TCTCTGC	T	232.59	PASS	AC=2;AF=0.037;AN=54;BaseQRankSum=2.454;DP=569;FS=0.000;HRun=0;HaplotypeScore=120.9485;InbreedingCoeff=0.7108;MQ=49.86;MQ0=42;MQRankSum=-2.199;QD=12.24;ReadPosRankSum=1.047;VQSLOD=2.3382;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:37:81.21:0,81,1920	0/0:2,0:1:3.01:0,3,98	0/0:41,0:12:23.11:0,23,287	0/0:40,0:13:20.70:0,21,340	0/0:12,0:12:30.10:0,30,885	0/0:11,0:7:12.04:0,12,282	0/0:31,0:26:57.15:0,57,1214	0/0:30,0:25:30.10:0,30,666	1/1:6,13:18:15.05:321,15,0	0/0:22,0:21:36.08:0,36,852	0/0:18,0:16:11.73:0,12,337	0/0:23,0:15:39.01:0,39,861	0/0:19,0:18:33.07:0,33,778	0/0:15,0:10:17.68:0,18,285	0/0:14,0:12:17.98:0,18,401	0/0:10,0:10:20.95:0,21,278	0/0:29,0:24:66.19:0,66,1634	0/0:19,0:18:39.13:0,39,901	0/0:25,0:8:15.05:0,15,315	0/0:13,0:9:18.06:0,18,484	0/0:34,0:32:64.85:0,65,1487	0/0:9,0:6:9.03:0,9,242	0/0:8,0:7:18.02:0,18,462	0/0:41,0:40:78.22:0,78,2257	0/0:15,0:9:18.91:0,19,486	0/0:10,0:8:21.07:0,21,583	0/0:16,0:12:33.11:0,33,935	./.
chr10	65586505	.	TCA	T	9760.51	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=11.835;DP=482;FS=2.424;HRun=0;HaplotypeScore=61.4987;InbreedingCoeff=0.9838;MQ=87.80;MQ0=0;MQRankSum=-0.610;QD=44.77;ReadPosRankSum=3.041;VQSLOD=6.0331;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:69.24:0,69,1400	1/1:0,3:3:9.03:147,9,0	0/0:19,0:19:54.17:0,54,971	0/0:20,0:20:51.14:0,51,967	0/0:21,0:21:63.19:0,63,1206	1/1:0,13:13:39.13:636,39,0	1/1:0,17:17:42.14:685,42,0	0/0:34,0:34:99:0,102,2051	0/0:11,0:11:33.11:0,33,659	0/0:26,0:26:78.27:0,78,1580	0/0:16,0:16:48.16:0,48,973	1/1:0,16:16:45.15:734,45,0	0/0:20,0:20:60.21:0,60,1201	1/1:0,16:16:45.15:734,45,0	1/1:0,20:20:57.19:930,57,0	0/0:12,0:12:36.12:0,36,732	1/1:0,26:26:60.20:979,60,0	0/0:26,0:26:78.27:0,78,1566	1/1:0,18:18:54.18:881,54,0	1/1:0,16:14:42.14:685,42,0	1/1:0,12:12:36.12:587,36,0	1/1:0,10:10:30.10:488,30,0	0/0:14,0:14:42.14:0,42,852	0/0:22,0:22:66.23:0,66,1340	1/1:0,10:9:27.09:440,27,0	1/1:0,16:16:45.13:707,45,0	1/1:0,22:22:60.20:979,60,0	1/1:0,3:3:9.03:147,9,0
chr10	65588038	.	GC	G	2401.10	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.388;DP=709;FS=3.586;HRun=2;HaplotypeScore=66.3591;InbreedingCoeff=0.9943;MQ=65.55;MQ0=7;MQRankSum=-0.128;QD=34.80;ReadPosRankSum=1.897;VQSLOD=4.2458;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,144,2091	0/0:5,0:5:15.05:0,15,225	0/0:33,0:20:60.20:0,60,867	0/0:39,0:28:78.73:0,79,1157	0/0:27,0:27:81.27:0,81,1213	0/0:24,0:24:69.23:0,69,1033	0/0:25,0:25:72.22:0,72,1039	0/0:26,0:25:72.24:0,72,1057	0/0:23,0:23:69.22:0,69,1013	1/1:1,31:31:93.28:1181,93,0	1/1:0,16:16:42.14:545,42,0	0/0:32,0:32:96.32:0,96,1419	0/0:25,0:25:75.25:0,75,1101	0/0:24,0:24:69.23:0,69,1026	0/0:28,0:28:84.28:0,84,1259	1/1:0,21:21:63.20:818,63,0	0/0:38,0:38:99:0,108,1618	0/0:17,0:17:42.14:0,42,628	0/0:17,0:16:48.15:0,48,701	0/0:23,0:23:66.22:0,66,987	0/0:28,0:28:84.27:0,84,1237	0/0:25,0:25:72.23:0,72,1059	0/0:29,0:29:87.28:0,87,1277	0/0:19,0:19:54.17:0,54,790	0/0:24,0:24:72.20:0,72,1054	0/0:15,0:15:45.14:0,45,656	0/0:26,0:25:78.26:0,78,1167	0/0:18,0:18:54.18:0,54,808
chr10	65588827	.	T	TCAG	22660.33	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=-14.806;DP=586;FS=12.443;HRun=0;HaplotypeScore=71.9022;InbreedingCoeff=0.9960;MQ=79.22;MQ0=0;MQRankSum=-6.535;QD=52.58;ReadPosRankSum=1.415;VQSLOD=6.6636;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:60.20:0,60,940	1/1:1,8:9:21.07:459,21,0	0/0:22,0:22:41.47:0,41,697	0/0:14,0:14:39.10:0,39,568	0/0:36,0:36:99:0,105,1660	1/1:2,22:25:63.22:1377,63,0	1/1:5,19:24:54.19:1180,54,0	1/1:7,24:32:75.24:1566,75,0	1/1:5,15:20:48.16:1048,48,0	1/1:2,30:33:93.32:1968,93,0	1/1:3,29:33:78.27:1702,78,0	1/1:4,13:19:45.15:959,45,0	0/0:16,0:16:48.16:0,48,755	1/1:1,6:7:18.06:392,18,0	1/1:4,20:24:60.21:1311,60,0	1/1:1,14:16:42.14:918,42,0	1/1:5,16:21:39.13:852,39,0	1/1:2,9:11:27.09:590,27,0	1/1:4,9:13:30.10:655,30,0	1/1:3,25:29:66.23:1441,66,0	1/1:2,15:17:39.13:853,39,0	1/1:0,14:15:39.13:852,39,0	0/0:28,0:28:75.24:0,75,1166	0/0:16,0:16:45.15:0,45,714	1/1:3,15:19:48.16:1048,48,0	1/1:2,24:26:72.21:1459,72,0	1/1:3,28:32:75.26:1635,75,0	1/1:0,6:6:18.06:393,18,0
chr10	65589302	.	C	CAACAGTACAGTGATAAGAA	74140.69	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-1.906;DP=619;FS=18.310;HRun=0;HaplotypeScore=269.4098;InbreedingCoeff=0.9976;MQ=76.69;MQ0=0;MQRankSum=-17.792;QD=179.52;ReadPosRankSum=3.633;VQSLOD=3.8643;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:45.15:0,45,2226	1/1:6,4:11:24.04:1798,24,0	0/0:23,0:23:60.19:0,60,2476	0/0:18,0:18:47.99:0,48,1607	0/0:21,0:21:60.21:0,60,2813	1/1:15,6:28:57.15:3943,57,0	1/1:8,2:11:24.08:1735,24,0	0/0:33,0:33:87.30:0,87,3592	0/0:29,0:29:87.28:0,87,4137	1/1:19,11:35:99:7463,99,0	1/1:20,6:28:57.19:3666,57,0	1/1:17,4:21:57.18:3290,57,0	0/0:20,0:20:54.17:0,54,2323	1/1:9,6:17:36.12:2902,36,0	1/1:15,16:35:93.32:6788,93,0	1/1:9,3:15:36.12:2616,36,0	1/1:2,4:9:18.06:1649,18,0	1/1:11,2:13:24.05:1346,24,0	1/1:18,2:23:69.21:3572,69,0	1/1:14,13:32:84.29:6177,84,0	1/1:9,4:14:36.12:2875,36,0	1/1:9,4:13:30.10:2090,30,0	0/0:30,0:30:84.29:0,84,3803	0/0:14,0:14:39.13:0,39,1943	1/1:14,15:31:84.29:6175,84,0	1/1:17,6:27:81.28:5599,81,0	1/1:17,14:35:93.32:7120,93,0	1/1:5,9:15:42.10:3337,42,0
chr10	65590448	.	G	GA	4237.06	PASS	AB=0.924;AC=39;AF=0.696;AN=56;BaseQRankSum=3.331;DP=607;FS=5.970;HRun=15;HaplotypeScore=94.6272;InbreedingCoeff=0.6757;MQ=74.28;MQ0=3;MQRankSum=-0.701;QD=8.59;ReadPosRankSum=2.385;VQSLOD=4.2025;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:15:29.43:0,29,166	1/1:12,0:12:22.62:112,23,0	0/0:27,0:13:1.68:0,2,18	0/1:30,0:19:2.78:3,0,22	0/1:20,7:28:97.66:98,0,143	1/1:16,0:16:28.06:138,28,0	1/1:24,0:24:53.20:253,53,0	0/1:32,1:32:14.61:15,0,132	0/0:8,0:17:15.75:0,16,64	1/1:13,18:33:22.90:332,23,0	1/1:10,20:30:33.96:359,34,0	1/1:16,0:16:30.83:149,31,0	0/0:17,0:17:5.56:0,6,134	1/1:15,0:15:29.98:162,30,0	1/1:20,0:20:53.06:244,53,0	1/1:6,19:25:37.11:297,37,0	1/1:18,0:18:42.29:207,42,0	0/0:8,0:8:1.11:0,1,3	1/1:29,0:29:62.01:286,62,0	1/1:23,1:24:43.13:231,43,0	1/1:12,0:12:10.47:112,10,0	1/1:18,0:18:42.19:207,42,0	0/0:16,0:16:26.18:0,26,155	0/0:12,0:13:25.37:0,25,145	1/1:29,0:29:54.65:233,55,0	1/1:32,0:32:70.29:325,70,0	1/1:28,0:28:52.49:283,52,0	1/1:18,0:18:25.08:191,25,0
chr10	65590459	.	A	AC	8639.56	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-11.025;DP=623;FS=1.151;HRun=0;HaplotypeScore=76.3326;InbreedingCoeff=0.9898;MQ=72.39;MQ0=5;MQRankSum=-0.409;QD=27.87;ReadPosRankSum=8.431;VQSLOD=5.0014;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:48.05:0,48,545	1/1:1,11:12:24.03:293,24,0	0/0:41,0:17:8.98:0,9,170	0/0:34,0:18:18.69:0,19,184	0/0:26,0:26:58.04:0,58,619	1/1:0,16:16:30.09:359,30,0	1/1:0,24:24:60.12:714,60,0	0/0:34,0:33:80.40:0,80,831	0/0:17,0:17:35.95:0,36,326	0/0:29,0:29:58.12:0,58,460	0/0:31,0:31:41.11:0,41,336	1/1:0,13:14:33.10:399,33,0	0/0:19,0:19:55.89:0,56,590	1/1:1,15:16:25.62:346,26,0	1/1:0,21:21:57.18:698,57,0	0/0:24,0:24:25.05:0,25,125	1/1:2,18:20:48.02:565,48,0	0/0:11,0:11:26.93:0,27,218	1/1:3,22:26:74.98:844,75,0	1/1:2,20:22:59.36:602,59,0	1/1:2,12:15:26.88:324,27,0	1/1:0,17:17:50.96:577,51,0	0/0:15,0:15:42.09:0,42,501	0/0:14,0:14:37.31:0,37,428	1/1:0,27:28:60.08:715,60,0	1/1:1,30:32:93.02:1029,93,0	1/1:2,22:28:62.21:668,62,0	1/1:1,17:18:40.71:508,41,0
chr10	65593820	.	TTA	T	13718.03	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=15.301;DP=669;FS=0.593;HRun=0;HaplotypeScore=80.4018;InbreedingCoeff=0.9985;MQ=89.33;MQ0=2;MQRankSum=-2.866;QD=40.71;ReadPosRankSum=5.373;VQSLOD=6.9105;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:75.26:0,75,1447	1/1:0,14:14:42.14:643,42,0	0/0:34,0:34:95.47:0,95,1627	0/0:17,0:17:32.35:0,32,718	0/0:31,0:31:87.25:0,87,1596	1/1:0,25:25:57.19:873,57,0	1/1:0,20:20:54.18:827,54,0	0/0:33,0:33:99:0,99,1793	0/0:19,0:19:57.20:0,57,1075	0/0:43,0:43:99:0,120,2235	0/0:18,0:18:54.16:0,54,963	1/1:0,21:21:54.18:827,54,0	0/0:25,0:25:75.26:0,75,1430	1/1:0,25:25:66.22:1010,66,0	1/1:0,23:23:63.21:964,63,0	0/0:24,0:24:72.23:0,72,1333	1/1:0,16:16:45.15:689,45,0	0/0:16,0:16:42.14:0,42,783	1/1:0,20:20:60.19:893,60,0	1/1:0,33:32:87.21:1303,87,0	1/1:2,27:28:75.25:1147,75,0	1/1:0,20:20:51.17:770,51,0	0/0:27,0:27:72.25:0,72,1353	0/0:19,0:19:57.18:0,57,1055	1/1:0,20:20:54.18:826,54,0	1/1:1,24:25:17.27:1020,17,0	1/1:1,36:37:99:1513,99,0	1/1:0,9:9:27.09:413,27,0
chr10	65594015	.	A	AG	561.77	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-6.449;DP=733;FS=4.806;HRun=4;HaplotypeScore=70.2169;InbreedingCoeff=0.9834;MQ=83.62;MQ0=0;MQRankSum=-2.425;QD=35.11;ReadPosRankSum=2.418;VQSLOD=4.2985;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:58:99:0,150,1691	0/0:15,0:15:42.12:0,42,476	0/0:22,0:22:48.09:0,48,524	0/0:21,0:21:41.06:0,41,376	0/0:26,0:26:72.20:0,72,816	0/0:29,0:29:81.22:0,81,908	0/0:28,0:28:72.16:0,72,802	0/0:17,0:17:42.12:0,42,476	0/0:23,0:23:69.20:0,69,783	0/0:32,0:32:84.22:0,84,937	0/0:18,0:18:48.13:0,48,543	0/0:37,0:38:99:0,107,1196	0/0:19,0:19:48.14:0,48,544	0/0:20,0:20:60.16:0,60,670	0/0:36,0:36:99:0,102,1138	0/0:31,0:31:84.24:0,84,953	0/0:31,0:31:84.22:0,84,943	1/1:0,16:16:48.16:657,48,0	0/0:12,0:12:27.08:0,27,306	0/0:32,0:32:90.26:0,90,1021	0/0:39,1:40:67.25:0,67,1140	0/0:22,0:22:63.16:0,63,700	0/0:20,0:20:48.13:0,48,545	0/0:33,0:33:93.22:0,93,1041	0/0:25,0:25:75.21:0,75,850	0/0:29,0:29:78.20:0,78,868	0/0:35,0:34:99:0,99,1122	0/0:5,0:5:15.04:0,15,170
chr10	65596530	.	T	TACACACACAC	7942.84	PASS	AB=0.696;AC=39;AF=0.696;AN=56;BaseQRankSum=6.617;DP=583;FS=6.004;HRun=0;HaplotypeScore=225.3204;InbreedingCoeff=0.7209;MQ=59.01;MQ0=6;MQRankSum=-5.778;QD=21.70;ReadPosRankSum=-5.795;VQSLOD=2.2215;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:69.18:0,69,1897	1/1:6,0:5:8.79:225,9,0	0/0:29,0:17:6.16:0,6,111	0/0:31,0:24:10.37:0,10,234	0/0:20,0:23:24.19:0,24,1206	1/1:22,0:22:12.44:202,12,0	1/1:20,0:20:5.98:124,6,0	1/1:33,0:31:27.02:644,27,0	1/1:20,0:20:20.93:557,21,0	1/1:9,0:32:64.42:1525,64,0	1/1:8,0:8:6.02:143,6,0	1/1:14,0:15:2.51:129,3,0	0/0:26,0:32:66.02:0,66,1780	1/1:23,0:21:15.92:275,16,0	1/1:25,0:23:2.70:130,3,0	1/1:16,8:28:9.50:448,10,0	1/1:14,0:13:12.02:237,12,0	0/1:9,5:16:7.95:288,0,8	1/1:13,0:12:19.54:330,20,0	1/1:11,0:10:12.04:216,12,0	0/0:11,0:11:0.47:0,0,1	1/1:11,0:8:6.02:105,6,0	0/0:10,0:11:27.09:0,27,682	0/0:35,0:38:78.24:0,78,2223	1/1:21,0:21:15.38:382,15,0	1/1:20,0:19:45.03:1006,45,0	1/1:22,0:21:30.56:754,31,0	1/1:5,0:5:9.03:222,9,0
chr10	65596636	.	AGGGTAT	A	14700.56	PASS	AB=0.524;AC=29;AF=0.518;AN=56;BaseQRankSum=14.647;DP=627;FS=38.081;HRun=0;HaplotypeScore=152.4183;InbreedingCoeff=0.9380;MQ=88.97;MQ0=1;MQRankSum=-18.296;QD=53.07;ReadPosRankSum=0.644;VQSLOD=2.7163;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:39:99:0,108,3815	1/1:0,9:9:21.07:505,21,0	0/0:23,0:23:45.76:0,46,1729	0/0:36,0:36:99:0,99,3349	0/0:22,0:22:66.23:0,66,2271	1/1:2,15:17:36.08:779,36,0	1/1:1,16:17:33.11:793,33,0	0/0:32,0:32:88.54:0,89,3045	0/0:25,0:25:75.26:0,75,2657	0/0:27,0:27:75.25:0,75,2613	0/0:28,0:28:84.29:0,84,2964	1/1:1,19:20:51.13:1140,51,0	0/0:32,0:32:96.33:0,96,3371	1/1:2,27:28:72.20:1612,72,0	1/1:0,30:30:75.17:1665,75,0	0/0:31,0:31:93.32:0,93,3282	1/1:2,6:8:12:236,12,0	0/0:18,0:18:51.18:0,51,1788	1/1:0,9:9:24.08:572,24,0	1/1:0,20:20:57.06:1103,57,0	1/1:6,21:27:36.08:771,36,0	1/1:0,16:16:45.15:1036,45,0	0/0:13,0:13:39.13:0,39,1388	0/0:23,0:23:66.23:0,66,2333	1/1:0,19:19:48.12:1064,48,0	0/1:3,30:33:4.45:2001,0,4	1/1:2,17:19:51.13:1135,51,0	1/1:0,4:4:12.04:288,12,0
chr10	65597012	.	A	AGAGAAAGATG	457.48	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-1.797;DP=609;FS=0.000;HRun=0;HaplotypeScore=175.5939;InbreedingCoeff=0.9359;MQ=75.07;MQ0=0;MQRankSum=-3.337;QD=57.19;ReadPosRankSum=-0.395;VQSLOD=3.3967;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:57.20:0,57,1741	0/0:18,0:18:39.13:0,39,1169	0/0:21,0:21:27.09:0,27,720	0/0:11,0:11:21.07:0,21,560	0/0:29,0:29:75.26:0,75,2193	0/0:25,0:25:66.21:0,66,2001	0/0:13,0:13:39.12:0,39,1143	0/0:34,0:34:84.27:0,84,2254	0/0:20,0:20:57.20:0,57,1716	0/0:38,0:38:99:0,108,3173	0/0:22,0:22:57.20:0,57,1735	0/0:22,0:22:63.22:0,63,1914	0/0:24,0:24:54.05:0,54,1634	0/0:19,0:19:54.17:0,54,1625	0/0:29,0:29:78.25:0,78,2220	0/0:20,0:20:51.18:0,51,1476	0/0:21,0:21:48.14:0,48,1349	1/1:3,5:8:12.51:544,13,0	0/0:15,0:15:30.09:0,30,829	0/0:34,0:34:93.32:0,93,2731	0/0:22,0:22:57.18:0,57,1638	0/0:22,0:22:63.22:0,63,1921	0/0:17,0:17:42.13:0,42,1197	0/0:6,0:6:15.05:0,15,471	0/0:29,0:29:60.21:0,60,1810	0/0:25,0:25:66.20:0,66,1925	0/0:37,0:37:99:0,105,3184	0/0:5,0:5:15.05:0,15,470
chr10	65598577	.	C	CGT	1096.27	PASS	AB=1.000;AC=14;AF=0.250;AN=56;BaseQRankSum=-1.606;DP=636;FS=20.376;HRun=0;HaplotypeScore=116.6789;InbreedingCoeff=0.0612;MQ=73.07;MQ0=12;MQRankSum=-0.110;QD=4.59;ReadPosRankSum=-3.784;VQSLOD=-0.2468;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:28:35.93:0,36,395	0/1:8,0:8:6.09:6,0,31	0/0:51,0:23:12.26:0,12,120	0/0:52,0:28:32.84:0,33,323	0/0:26,0:25:48.08:0,48,528	0/1:23,0:21:42.13:42,0,53	0/0:27,0:27:34.37:0,34,306	1/1:20,15:36:52.04:725,52,0	1/1:4,2:22:41.96:382,42,0	0/0:17,0:17:22.99:0,23,89	0/0:14,0:15:24.33:0,24,104	0/1:21,0:21:10.94:11,0,123	0/0:25,0:24:39.07:0,39,442	0/0:19,0:18:8.59:0,9,46	0/0:21,0:21:6.60:0,7,100	0/0:23,0:22:44.89:0,45,183	0/1:28,0:28:2.57:3,0,113	0/0:21,0:21:30.98:0,31,228	0/1:14,0:14:18.18:18,0,92	0/1:18,0:18:16.57:17,0,87	0/1:18,0:18:20.66:21,0,27	0/1:13,0:13:9.70:10,0,27	0/0:17,0:17:32.91:0,33,350	0/0:19,0:19:45.13:0,45,520	0/1:23,0:23:5.24:5,0,44	0/0:26,0:26:21.06:0,21,158	0/1:15,0:15:15.47:15,0,84	0/0:9,0:9:1.90:0,2,33
chr10	65598599	.	TGA	T	1698.43	PASS	AB=0.975;AC=11;AF=0.196;AN=56;BaseQRankSum=0.558;DP=661;FS=0.495;HRun=0;HaplotypeScore=111.0523;InbreedingCoeff=0.4614;MQ=63.80;MQ0=17;MQRankSum=1.246;QD=8.75;ReadPosRankSum=-2.247;VQSLOD=2.9444;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:37:59.60:0,60,954	0/0:7,0:7:12.03:0,12,152	0/1:52,0:15:0.83:1,0,252	0/0:56,0:25:21.85:0,22,339	0/0:22,0:21:62.31:0,62,922	0/0:23,0:22:15.28:0,15,299	0/0:33,0:32:13.75:0,14,361	0/1:36,0:34:53.88:54,0,636	0/0:23,0:24:54.01:0,54,530	1/1:0,14:14:41.98:510,42,0	1/1:3,10:13:25.31:344,25,0	0/0:23,0:23:47.96:0,48,495	0/0:27,0:26:69.08:0,69,1022	0/0:22,0:21:39.05:0,39,398	0/0:23,0:23:41.67:0,42,405	1/1:0,25:25:54.13:780,54,0	0/0:27,0:27:52.32:0,52,565	0/1:17,0:18:27.42:27,0,77	0/0:13,0:13:14.80:0,15,284	0/0:24,0:24:37.64:0,38,372	0/0:16,0:16:31.31:0,31,309	0/0:11,0:11:21.04:0,21,215	0/0:14,0:14:32.14:0,32,560	0/0:25,0:25:45.14:0,45,959	0/0:23,0:23:38.62:0,39,364	0/1:23,2:25:99:133,0,385	0/0:16,0:16:30.04:0,30,320	0/1:11,0:11:10.24:10,0,266
chr10	65598601	.	A	AGT	7754.64	PASS	AB=0.789;AC=34;AF=0.607;AN=56;BaseQRankSum=-4.960;DP=658;FS=2.582;HRun=0;HaplotypeScore=89.4180;InbreedingCoeff=0.6869;MQ=63.76;MQ0=18;MQRankSum=1.004;QD=21.02;ReadPosRankSum=3.289;VQSLOD=5.3110;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:36:66.18:0,66,813	0/1:2,5:7:25.15:135,0,25	0/0:54,0:14:18.06:0,18,222	0/0:56,0:25:8.95:0,9,89	0/0:21,0:20:48.15:0,48,592	1/1:5,18:23:27.09:443,27,0	1/1:14,18:31:20.94:311,21,0	0/0:34,0:32:31.10:0,31,513	0/0:24,0:24:34.74:0,35,224	1/1:14,0:14:38.96:417,39,0	0/1:13,0:13:10.11:108,0,10	1/1:4,17:22:36.12:589,36,0	0/0:25,0:24:66.21:0,66,815	1/1:1,22:23:36.12:590,36,0	1/1:3,19:23:33.11:541,33,0	1/1:26,0:25:51.60:381,52,0	0/1:7,20:27:29.25:594,0,29	1/1:17,1:19:42.46:281,42,0	0/1:14,0:14:55.71:147,0,56	1/1:3,20:23:32.81:472,33,0	1/1:2,15:17:27.09:443,27,0	1/1:1,10:11:18.06:295,18,0	0/0:13,0:13:30.09:0,30,372	0/0:25,0:25:37.78:0,38,648	1/1:3,17:20:30.10:492,30,0	1/1:8,16:25:57.09:813,57,0	1/1:3,11:17:18.06:294,18,0	1/1:4,7:11:9.85:409,10,0
chr10	65598850	.	G	GT	5805.85	PASS	AB=0.753;AC=38;AF=0.679;AN=56;BaseQRankSum=-5.218;DP=558;FS=5.804;HRun=13;HaplotypeScore=67.3162;InbreedingCoeff=0.6722;MQ=72.86;MQ0=1;MQRankSum=-1.881;QD=14.23;ReadPosRankSum=-1.659;VQSLOD=4.9382;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,1:28:38.89:0,39,334	1/1:0,4:5:8.85:70,9,0	0/1:21,1:18:3.39:8,0,3	0/0:11,1:9:8.48:0,8,51	0/0:25,2:28:8.78:0,9,337	1/1:3,17:22:47.73:419,48,0	0/1:4,4:11:0.01:100,0,0	0/0:32,4:37:2.61:0,3,296	0/0:13,0:14:28.72:0,29,189	1/1:4,17:23:37.18:389,37,0	1/1:7,21:30:65.79:528,66,0	1/1:5,15:22:30.18:389,30,0	0/0:16,0:16:32.63:0,33,224	1/1:0,12:12:15.02:139,15,0	1/1:5,19:26:36.21:454,36,0	1/1:4,12:17:6.38:192,6,0	1/1:3,16:21:17.46:322,17,0	1/1:4,2:15:25.89:157,26,0	1/1:8,13:21:21.40:324,21,0	1/1:3,19:25:32.86:391,33,0	1/1:1,10:11:24.03:223,24,0	1/1:6,7:14:16.05:120,16,0	0/1:21,3:24:5.17:5,0,257	0/0:14,1:15:7.81:0,8,198	1/1:4,11:16:26.87:237,27,0	1/1:3,25:30:74.55:631,75,0	1/1:5,27:35:57.02:635,57,0	0/1:1,4:5:8.57:72,0,9
chr10	65600379	.	CT	C	1245.68	PASS	AB=0.766;AC=38;AF=0.679;AN=56;BaseQRankSum=2.221;DP=433;FS=0.632;HRun=17;HaplotypeScore=59.2349;InbreedingCoeff=0.1262;MQ=77.43;MQ0=3;MQRankSum=-0.008;QD=3.56;ReadPosRankSum=4.786;VQSLOD=-0.4005;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:25,7:32:52.49:52,0,161	1/1:1,1:3:4.92:22,5,0	0/0:31,0:15:14.61:0,15,89	0/0:27,0:16:5.97:0,6,50	0/0:14,0:14:0.01:0,0,20	0/1:7,10:18:20.40:80,0,20	1/1:5,5:11:13.62:72,14,0	1/1:13,1:23:12.07:43,12,0	1/1:6,5:12:18.62:95,19,0	1/1:12,0:20:11.76:34,12,0	1/1:2,0:4:4.02:11,4,0	1/1:12,4:17:19.10:105,19,0	0/1:6,2:8:2:2,0,63	0/1:9,1:10:9.50:9,0,18	0/1:6,7:15:26.96:43,0,27	1/1:4,0:9:8.07:23,8,0	1/1:12,10:24:23.79:128,24,0	1/1:10,7:18:7.33:100,7,0	0/1:10,2:12:8.24:42,0,8	0/1:6,2:10:13.29:28,0,13	1/1:7,5:13:11.50:67,11,0	1/1:3,4:7:8.71:50,9,0	0/1:9,1:9:10.78:11,0,16	0/0:11,0:11:20.91:0,21,161	0/1:3,10:16:14.79:109,0,15	1/1:9,8:19:21.21:110,21,0	1/1:14,9:30:26.68:170,27,0	0/1:6,1:7:7.80:8,0,36
chr10	65600650	.	TTTATTATTA	T	1879.66	PASS	AC=26;AF=0.722;AN=36;BaseQRankSum=0.213;DP=266;FS=1.885;HRun=0;HaplotypeScore=75.9134;InbreedingCoeff=0.4791;MQ=80.66;MQ0=2;MQRankSum=-3.083;QD=10.80;ReadPosRankSum=-1.532;VQSLOD=1.5282;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:11:3.01:0,3,58	./.	./.	./.	1/1:4,1:6:3.01:36,3,0	1/1:6,4:10:12.04:326,12,0	1/1:6,2:8:3.01:82,3,0	1/1:40,0:39:6.39:46,6,0	1/1:12,0:13:6.01:89,6,0	0/0:7,0:7:3.01:0,3,58	0/0:8,0:8:3.01:0,3,54	1/1:9,2:11:6.02:163,6,0	./.	1/1:6,3:9:6.02:163,6,0	1/1:16,3:19:9.03:239,9,0	0/0:7,0:9:6.02:0,6,115	1/1:9,7:16:9.03:245,9,0	./.	1/1:12,3:15:9.03:204,9,0	1/1:2,2:4:3.01:82,3,0	./.	./.	0/0:3,0:3:6.02:0,6,271	./.	./.	./.	1/1:13,3:16:9.03:245,9,0	1/1:5,2:7:3.01:82,3,0
chr10	65600687	.	TTA	T	44.62	PASS	AB=0.990;AC=13;AF=0.260;AN=50;BaseQRankSum=7.446;DP=156;FS=5.496;HRun=0;HaplotypeScore=35.5918;InbreedingCoeff=-0.2043;MQ=72.99;MQ0=3;MQRankSum=-4.057;QD=0.46;ReadPosRankSum=5.422;VQSLOD=-0.0322;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:8:16.99:0,17,219	./.	0/0:6,0:4:8.98:0,9,82	0/1:5,0:5:15.22:15,0,25	0/1:7,0:7:19.69:20,0,201	0/1:10,0:10:2.12:2,0,190	0/0:4,0:4:0.96:0,1,67	0/1:29,4:29:89.50:90,0,668	0/0:4,0:4:2.01:0,2,81	0/0:5,0:5:7.98:0,8,109	0/0:1,0:1:3.01:0,3,37	0/1:4,0:4:4.01:4,0,64	0/0:4,0:4:12.04:0,12,148	0/1:6,0:6:1.10:1,0,98	0/1:6,0:6:1.99:2,0,97	1/1:2,0:2:1.77:4,2,0	0/1:13,0:13:3.23:3,0,128	0/0:4,0:4:12.01:0,12,133	0/0:13,0:12:19.17:0,19,325	0/1:2,0:2:2.01:2,0,32	0/0:1,0:1:3.01:0,3,37	./.	0/0:3,0:3:9.03:0,9,153	./.	0/0:3,0:3:9.03:0,9,110	0/0:3,0:3:6.02:0,6,74	0/1:6,0:5:9.24:9,0,61	0/1:3,0:3:2.05:2,0,32
chr10	65601272	.	A	AGTGTGTGTGT	5466.17	PASS	AB=1.000;AC=43;AF=0.860;AN=50;BaseQRankSum=-0.236;DP=640;FS=12.705;HRun=0;HaplotypeScore=203.4988;InbreedingCoeff=0.2538;MQ=60.43;MQ0=9;MQRankSum=-4.957;QD=10.24;ReadPosRankSum=-1.320;VQSLOD=2.8124;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:32,0:32:50.86:51,0,371	1/1:12,0:12:5.90:115,6,0	./.	./.	0/1:22,0:22:71.77:72,0,323	1/1:23,0:33:5.45:180,5,0	1/1:30,0:27:12.48:315,12,0	1/1:30,0:30:16.72:132,17,0	1/1:18,0:18:3.01:123,3,0	1/1:21,0:21:20.90:229,21,0	1/1:16,0:16:3.01:65,3,0	1/1:15,10:26:6.02:296,6,0	0/0:24,0:25:6.35:0,6,418	1/1:23,0:23:20.74:574,21,0	1/1:17,9:29:5.29:237,5,0	1/1:18,0:19:21.02:429,21,0	1/1:21,0:29:17.45:366,17,0	1/1:3,0:3:5.48:26,5,0	1/1:22,0:19:13.81:288,14,0	1/1:19,0:18:6.01:121,6,0	1/1:19,0:17:0.47:1,0,0	1/1:4,8:12:3.01:148,3,0	0/1:21,0:25:16.62:17,0,489	0/0:25,0:25:14.81:0,15,504	1/1:14,10:25:9.03:386,9,0	1/1:32,0:31:38.54:460,39,0	1/1:33,0:33:44.64:835,45,0	./.
chr10	65601281	.	G	GTGTGTGTGTGTA	2501.83	PASS	AB=0.979;AC=19;AF=0.339;AN=56;BaseQRankSum=8.991;DP=661;FS=35.604;HRun=0;HaplotypeScore=228.1406;InbreedingCoeff=-0.4855;MQ=54.33;MQ0=15;MQRankSum=-7.802;QD=5.65;ReadPosRankSum=0.186;VQSLOD=1.2246;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:37:59.15:0,59,810	0/1:11,0:11:56.48:56,0,60	0/1:18,0:13:1.89:2,0,116	0/0:26,0:16:20.92:0,21,206	0/0:26,0:26:27.12:0,27,659	0/1:32,0:32:98.80:99,0,209	0/1:35,0:32:99:175,0,184	0/1:36,0:36:13.82:14,0,239	0/1:8,12:23:14.54:173,0,15	0/0:21,0:21:31.88:0,32,226	0/1:16,0:15:26.48:26,0,84	0/1:23,0:23:97.78:187,0,98	0/0:28,0:27:62.55:0,63,930	0/1:22,0:22:12.49:299,0,12	0/1:30,0:30:99:136,0,183	0/1:19,0:18:53.37:236,0,53	0/1:29,0:27:55.68:256,0,56	0/1:5,0:5:13.57:23,0,14	0/1:20,0:17:99:137,0,152	0/1:21,0:20:36.65:37,0,225	0/0:19,0:17:20.36:0,20,155	0/1:13,0:13:56.89:92,0,57	0/0:28,0:28:51.37:0,51,883	0/0:24,0:23:48.56:0,49,895	0/1:25,0:24:78.80:259,0,79	0/1:33,0:31:39.36:39,0,245	0/1:32,0:32:88.80:413,0,89	0/0:8,0:7:8.97:0,9,70
chr10	65601885	.	ATTT	A	2752.81	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=6.972;DP=366;FS=11.135;HRun=13;HaplotypeScore=82.7670;InbreedingCoeff=0.9002;MQ=61.01;MQ0=5;MQRankSum=-8.006;QD=15.91;ReadPosRankSum=3.250;VQSLOD=1.3971;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:25:70.10:0,70,1279	1/1:4,2:6:9:99,9,0	0/0:10,0:8:9.03:0,9,173	0/0:5,0:5:6.02:0,6,102	0/0:26,0:27:72.18:0,72,1252	1/1:6,7:13:23.98:239,24,0	1/1:6,9:14:26.95:267,27,0	0/0:5,0:25:25.46:0,25,97	0/0:15,0:15:36.12:0,36,692	0/0:10,0:21:34.15:0,34,211	0/0:6,0:12:7.21:0,7,66	1/1:5,8:13:23.96:250,24,0	0/0:13,0:14:24.08:0,24,445	1/1:4,4:8:12:122,12,0	1/1:7,6:13:20.97:202,21,0	0/0:4,0:11:27.86:0,28,148	1/1:5,8:13:21:213,21,0	0/0:2,0:6:11.36:0,11,59	1/1:10,3:13:8.88:97,9,0	1/1:6,16:22:51.05:522,51,0	1/1:6,2:8:9:97,9,0	1/1:3,2:5:9.01:95,9,0	0/0:14,0:14:30.06:0,30,506	0/0:5,0:5:9.03:0,9,173	1/1:3,6:9:18.02:188,18,0	1/1:11,6:18:16.85:271,17,0	1/1:5,8:13:13.08:231,13,0	1/1:2,2:3:8.94:80,9,0
chr10	65601894	.	T	TTAAA	5395.94	PASS	AB=1.000;AC=32;AF=0.571;AN=56;BaseQRankSum=5.320;DP=315;FS=11.273;HRun=0;HaplotypeScore=78.7805;InbreedingCoeff=0.7817;MQ=46.45;MQ0=21;MQRankSum=-8.271;QD=35.04;ReadPosRankSum=1.872;VQSLOD=3.7930;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:27:75.26:0,75,1362	1/1:3,0:3:9.03:121,9,0	0/0:5,0:3:9.03:0,9,168	0/0:3,0:3:6.02:0,6,99	0/0:26,0:26:75.22:0,75,1284	1/1:8,0:8:24.08:377,24,0	1/1:12,0:11:33.07:448,33,0	0/0:34,0:27:72.26:0,72,961	0/0:13,0:13:36.12:0,36,667	0/1:12,0:12:17:17,0,176	0/1:8,0:7:16.80:17,0,56	1/1:12,0:12:36.12:608,36,0	0/0:11,0:11:27.09:0,27,464	1/1:5,0:4:12.04:197,12,0	1/1:9,0:9:24.08:421,24,0	0/0:12,0:11:27.16:0,27,154	1/1:12,0:10:27.09:465,27,0	0/0:8,0:5:11.97:0,12,98	1/1:9,0:8:17.61:222,18,0	1/1:18,1:19:57.19:930,57,0	1/1:4,0:3:9.03:134,9,0	1/1:3,0:3:9.03:156,9,0	0/0:13,0:13:30.06:0,30,502	0/0:5,0:5:9.03:0,9,168	1/1:6,0:6:18.06:265,18,0	1/1:11,2:15:29.76:502,30,0	1/1:10,0:11:30.06:416,30,0	1/1:6,0:3:8.94:100,9,0
chr10	65601901	.	AG	A	3689.15	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=10.860;DP=280;FS=17.130;HRun=1;HaplotypeScore=56.4389;InbreedingCoeff=0.8596;MQ=41.31;MQ0=36;MQRankSum=-10.421;QD=26.73;ReadPosRankSum=4.102;VQSLOD=2.2204;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:27:48.08:0,48,946	1/1:0,2:2:6.02:67,6,0	0/0:5,0:3:9.03:0,9,144	0/0:2,0:2:3:0,3,27	0/0:27,0:27:68.68:0,69,966	1/1:1,7:7:21.06:234,21,0	1/1:1,9:9:27.07:296,27,0	0/0:41,0:24:72.20:0,72,998	0/0:13,0:13:39.13:0,39,587	1/1:4,8:10:29.44:308,29,0	1/1:3,4:5:8.95:69,9,0	1/1:0,8:8:24.04:251,24,0	0/0:7,0:7:18.01:0,18,255	1/1:0,5:4:12.03:131,12,0	1/1:0,6:6:18.05:194,18,0	1/1:1,7:7:21.06:235,21,0	1/1:4,6:7:20.85:211,21,0	1/1:5,4:5:12.04:139,12,0	1/1:0,6:5:12.04:141,12,0	1/1:0,16:16:48.13:528,48,0	1/1:1,2:2:6.02:64,6,0	1/1:0,2:2:6.02:64,6,0	0/0:9,0:9:21.07:0,21,321	0/0:6,0:6:9.02:0,9,124	1/1:0,6:6:18.05:201,18,0	1/1:0,7:7:21.06:237,21,0	1/1:1,7:8:23.90:249,24,0	1/1:3,2:2:6.02:68,6,0
chr10	65602081	.	AT	A	702.97	PASS	AB=0.824;AC=21;AF=0.389;AN=54;BaseQRankSum=5.163;DP=287;FS=4.381;HRun=12;HaplotypeScore=41.9185;InbreedingCoeff=0.6680;MQ=62.66;MQ0=12;MQRankSum=-4.247;QD=7.25;ReadPosRankSum=-1.709;VQSLOD=1.2062;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:22:38.91:0,39,378	1/1:1,4:4:2.95:23,3,0	0/0:8,0:5:5.49:0,5,28	0/0:7,0:5:8.98:0,9,75	0/0:19,0:19:51.09:0,51,513	0/0:1,10:10:0:0,0,0	1/1:0,4:4:2.97:23,3,0	0/0:28,0:23:42.06:0,42,416	0/0:14,0:14:39.08:0,39,395	0/0:6,0:6:14.38:0,14,75	0/0:11,0:10:26.23:0,26,152	0/0:0,7:7:0:0,0,0	0/1:11,3:14:5.24:5,0,124	1/1:0,5:5:5.91:46,6,0	0/0:1,6:6:0:0,0,0	0/0:4,0:4:11.60:0,12,65	1/1:0,11:11:17.78:134,18,0	0/0:8,0:8:17.41:0,17,107	1/1:1,6:7:19.95:142,20,0	1/1:1,13:13:5.79:46,6,0	1/1:0,2:2:2.97:23,3,0	1/1:1,5:5:2.92:23,3,0	0/0:16,0:15:33.04:0,33,323	0/0:14,1:15:12.83:0,13,312	0/0:1,6:6:0:0,0,0	1/1:0,10:10:29.87:230,30,0	1/1:2,16:16:23.74:180,24,0	./.
chr10	65602093	.	T	TA	3446.93	PASS	AB=0.962;AC=38;AF=0.704;AN=54;BaseQRankSum=3.720;DP=326;FS=21.102;HRun=2;HaplotypeScore=42.4062;InbreedingCoeff=0.8440;MQ=67.94;MQ0=1;MQRankSum=-6.004;QD=16.73;ReadPosRankSum=1.383;VQSLOD=2.1495;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:42.36:0,42,492	1/1:6,0:6:17.40:114,17,0	0/1:11,0:7:6.47:6,0,36	0/1:8,0:6:1.71:2,0,37	0/0:20,0:20:60.14:0,60,690	1/1:11,0:11:29.58:196,30,0	1/1:7,0:7:14.88:110,15,0	0/0:23,0:23:51.05:0,51,533	0/0:17,0:17:51.02:0,51,563	1/1:0,12:12:32.98:333,33,0	1/1:0,15:15:44.38:320,44,0	1/1:7,0:7:20.60:126,21,0	0/0:11,0:11:29.81:0,30,267	1/1:8,0:8:23.61:152,24,0	1/1:7,0:7:20.67:134,21,0	1/1:0,9:9:11.92:114,12,0	1/1:13,0:13:37.93:228,38,0	1/1:1,10:11:13.47:188,13,0	1/1:10,0:10:28.70:179,29,0	1/1:18,0:18:53.28:361,53,0	1/1:2,0:2:5.87:35,6,0	1/1:10,0:10:26.70:192,27,0	0/0:14,0:14:39.07:0,39,434	0/0:15,0:15:41.98:0,42,461	1/1:7,0:7:17.78:120,18,0	1/1:13,0:13:36:196,36,0	1/1:20,0:20:53.76:338,54,0	./.
chr10	65602861	.	ACT	A	754.44	PASS	AB=0.897;AC=29;AF=0.659;AN=44;BaseQRankSum=4.418;DP=655;FS=13.711;HRun=0;HaplotypeScore=77.8596;InbreedingCoeff=-0.0427;MQ=69.00;MQ0=36;MQRankSum=0.105;QD=1.97;ReadPosRankSum=1.426;VQSLOD=0.4062;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:25:17.19:17,0,123	1/1:6,0:6:5.83:38,6,0	./.	0/0:77,0:27:0:0,0,0	./.	1/1:22,0:25:2.99:23,3,0	0/1:12,7:18:29.05:113,0,29	./.	./.	0/1:13,1:14:22.51:23,0,59	1/1:23,0:22:2.99:23,3,0	1/1:23,1:28:3.01:32,3,0	0/0:21,0:21:12.03:0,12,153	1/1:20,1:22:11.68:84,12,0	1/1:18,3:21:17.99:172,18,0	0/1:21,1:22:17.02:17,0,158	0/1:27,3:28:10.46:84,0,10	1/1:9,0:10:2.84:14,3,0	0/0:15,0:14:0:0,0,0	1/1:21,0:22:2.84:14,3,0	0/1:18,4:22:13.35:13,0,97	./.	0/0:14,0:14:3:0,3,25	0/1:17,2:19:16.21:16,0,148	1/1:21,0:22:2.84:14,3,0	1/1:18,0:18:2.37:8,2,0	1/1:28,3:32:17.86:174,18,0	./.
chr10	65603003	.	CT	C	2756.18	PASS	AB=0.760;AC=40;AF=0.714;AN=56;BaseQRankSum=4.913;DP=569;FS=0.000;HRun=15;HaplotypeScore=76.0189;InbreedingCoeff=0.5041;MQ=70.68;MQ0=1;MQRankSum=-0.893;QD=5.99;ReadPosRankSum=5.884;VQSLOD=2.5910;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:38.78:0,39,317	0/1:4,7:11:5.70:95,0,6	0/1:23,2:16:1.78:2,0,66	0/1:19,0:13:8:8,0,44	0/0:18,1:27:15.53:0,16,235	0/1:3,5:9:4.51:86,0,5	1/1:4,8:14:27.65:165,28,0	1/1:12,11:23:4.16:144,4,0	1/1:3,5:9:19.73:119,20,0	1/1:8,0:25:36.60:106,37,0	1/1:3,0:24:32.51:94,33,0	1/1:8,10:20:26.68:152,27,0	0/0:19,0:20:30.86:0,31,270	0/1:19,8:31:55.64:133,0,56	1/1:10,4:17:32.52:187,33,0	1/1:4,0:25:39.58:114,40,0	1/1:7,2:10:12.87:69,13,0	1/1:5,0:17:20.28:59,20,0	1/1:15,9:25:9.15:169,9,0	1/1:10,16:29:41.17:247,41,0	1/1:7,7:15:15.70:100,16,0	1/1:10,17:30:23.17:259,23,0	0/0:25,0:25:36.14:0,36,423	0/0:15,0:15:35.94:0,36,300	1/1:6,17:24:17.69:226,18,0	1/1:11,7:21:26.58:152,27,0	1/1:12,16:28:3.37:228,3,0	0/1:4,2:7:30.40:30,0,33
chr10	65607047	.	CT	C	3180.02	PASS	AB=0.647;AC=34;AF=0.607;AN=56;BaseQRankSum=3.359;DP=551;FS=2.581;HRun=15;HaplotypeScore=69.2357;InbreedingCoeff=0.5193;MQ=64.95;MQ0=1;MQRankSum=-0.501;QD=7.95;ReadPosRankSum=4.576;VQSLOD=3.0702;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:14,1:17:29.78:0,30,238	1/1:3,8:12:2.07:117,2,0	0/0:17,0:14:15.08:0,15,130	0/0:8,0:6:11.92:0,12,89	0/0:33,2:35:20.32:0,20,409	1/1:11,12:26:24.03:255,24,0	0/1:5,8:15:15.43:116,0,15	1/1:15,16:33:2.04:226,2,0	1/1:4,11:15:26.56:173,27,0	1/1:6,13:21:16.90:204,17,0	1/1:4,12:20:40.60:235,41,0	1/1:5,7:17:9.52:143,10,0	0/0:11,1:18:10.52:0,11,191	0/1:11,5:17:2.72:50,0,3	0/1:5,9:14:2.73:111,0,3	1/1:17,15:33:26.75:284,27,0	1/1:3,10:14:22.68:140,23,0	0/0:8,0:11:17.68:0,18,134	1/1:6,12:18:3.96:193,4,0	0/1:6,16:26:6.25:188,0,6	1/1:4,11:15:23.11:153,23,0	0/1:9,9:19:46.45:108,0,46	0/0:19,2:21:23.07:0,23,308	0/0:20,0:23:33.45:0,33,367	1/1:8,20:29:29.21:279,29,0	1/1:12,9:22:9.16:139,9,0	1/1:9,17:28:41.38:248,41,0	0/1:2,2:5:8.31:13,0,8
chr10	65607158	.	G	GTGTGTTATATAC	57576.07	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-3.786;DP=682;FS=5.262;HRun=0;HaplotypeScore=218.9954;InbreedingCoeff=0.9984;MQ=69.36;MQ0=0;MQRankSum=-18.632;QD=125.44;ReadPosRankSum=2.130;VQSLOD=4.7190;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:57.15:0,57,1514	1/1:6,5:11:30.10:1572,30,0	0/0:24,0:24:63.19:0,63,1983	0/0:19,0:19:42.13:0,42,1321	0/0:33,0:33:87.28:0,87,2636	1/1:11,10:22:54.19:3131,54,0	1/1:20,10:33:81.19:3990,81,0	0/0:25,0:25:66.18:0,66,2059	0/0:21,0:21:60.21:0,60,2182	1/1:18,6:26:72.23:3663,72,0	1/1:15,6:21:48.12:1523,48,0	1/1:11,13:25:69.19:3721,69,0	0/0:28,0:28:75.26:0,75,2727	1/1:8,12:21:54.19:3237,54,0	1/1:13,12:25:69.15:3288,69,0	1/1:13,21:37:96.33:5403,96,0	1/1:5,6:13:30.06:1668,30,0	1/1:4,4:9:21.07:1095,21,0	1/1:13,4:19:54.09:2437,54,0	1/1:33,7:44:99:3743,114,0	1/1:10,4:18:27.01:866,27,0	1/1:17,6:26:66.05:2501,66,0	0/0:23,0:23:63.21:0,63,2051	0/0:29,0:29:87.21:0,87,2904	1/1:9,6:15:42.10:2195,42,0	1/1:17,15:36:99:4950,99,0	1/1:14,27:48:99:7328,126,0	1/1:2,5:9:21.07:1265,21,0
chr10	65610241	.	G	GT	10428.97	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-12.887;DP=504;FS=0.000;HRun=7;HaplotypeScore=43.6215;InbreedingCoeff=0.9665;MQ=69.15;MQ0=0;MQRankSum=-1.154;QD=30.14;ReadPosRankSum=2.452;VQSLOD=5.0051;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:51.07:0,51,487	1/1:0,4:4:8.99:92,9,0	0/0:6,0:6:5.80:0,6,42	0/0:9,0:8:20.96:0,21,191	0/0:24,0:24:60.09:0,60,579	1/1:2,34:36:96.29:1160,96,0	1/1:1,8:9:21.06:254,21,0	0/0:31,0:31:81.07:0,81,764	0/0:25,0:25:69.09:0,69,661	1/1:0,19:19:53.16:596,53,0	1/1:1,27:29:75.05:868,75,0	1/1:2,16:18:16.16:477,16,0	0/0:16,0:16:42.07:0,42,406	1/1:1,18:19:48.15:580,48,0	1/1:1,15:16:42.13:507,42,0	1/1:1,19:20:48.15:580,48,0	1/1:1,11:12:30.09:362,30,0	1/1:3,6:9:18.06:217,18,0	1/1:1,9:10:27.08:326,27,0	1/1:2,27:29:75.23:906,75,0	1/1:1,12:13:36.11:435,36,0	1/1:2,12:14:36.11:435,36,0	0/0:17,0:17:51.08:0,51,492	0/0:12,0:12:36.04:0,36,341	1/1:3,22:25:60.18:725,60,0	1/1:2,22:24:66.20:797,66,0	1/1:3,27:30:78.23:930,78,0	1/1:2,8:10:15.05:181,15,0
chr10	65614775	.	CGT	C	1778.93	PASS	AB=0.985;AC=37;AF=0.712;AN=52;BaseQRankSum=8.107;DP=739;FS=1.870;HRun=0;HaplotypeScore=173.7651;InbreedingCoeff=0.1361;MQ=54.65;MQ0=8;MQRankSum=-6.474;QD=3.00;ReadPosRankSum=0.252;VQSLOD=2.7110;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:20,26:46:39.11:439,39,0	1/1:13,0:13:11.36:56,11,0	./.	0/0:20,0:7:0:0,0,0	1/1:14,13:29:23.89:249,24,0	1/1:20,0:20:11.83:57,12,0	./.	0/0:26,0:26:4.99:0,5,24	1/1:12,1:25:39.41:214,39,0	0/1:28,0:27:10.95:47,0,11	1/1:18,0:18:2.80:13,3,0	1/1:36,0:36:1.79:104,2,0	0/1:31,2:35:28.04:28,0,745	1/1:38,0:38:1.79:110,2,0	0/1:41,0:41:50.88:58,0,51	0/1:27,0:27:25.23:59,0,25	1/1:25,0:25:4.53:31,5,0	1/1:17,0:17:16.07:67,16,0	1/1:21,0:21:5.68:28,6,0	1/1:23,0:23:11.46:59,11,0	1/1:29,0:27:0.47:1,0,0	0/1:32,0:32:9.20:47,0,9	0/0:20,0:20:30.56:0,31,426	0/0:31,1:32:23.41:0,23,786	0/1:30,0:30:23.04:83,0,23	0/1:34,0:34:31.82:32,0,54	1/1:22,0:22:25.57:126,26,0	1/1:4,0:4:5.52:25,6,0
chr10	65614786	.	GTGTGTGTGTGTGTGTGTGTGTGTA	G	11118.16	PASS	AB=0.988;AC=21;AF=0.375;AN=56;BaseQRankSum=9.969;DP=790;FS=21.141;HRun=0;HaplotypeScore=368.5801;InbreedingCoeff=0.3504;MQ=52.46;MQ0=15;MQRankSum=-9.099;QD=27.52;ReadPosRankSum=6.831;VQSLOD=1.5576;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:57.18:0,57,4791	0/1:11,1:12:7.37:584,0,7	0/0:31,0:13:15.05:0,15,873	0/0:34,0:11:19.31:0,19,1186	0/0:35,0:35:48.12:0,48,3484	1/1:18,2:20:15.05:753,15,0	0/1:25,0:25:11.93:76,0,12	0/0:24,0:24:40.69:0,41,2638	0/0:28,0:28:63.15:0,63,4133	0/0:28,0:27:51.18:0,51,2073	0/0:16,0:16:12.04:0,12,456	1/1:32,3:35:33.11:1534,33,0	0/0:38,0:38:91.56:0,92,8546	1/1:35,4:38:25.80:1628,26,0	1/1:43,3:46:33.54:1276,34,0	0/0:29,0:29:35.88:0,36,1183	0/1:24,0:24:99:476,0,125	0/0:19,0:19:24.07:0,24,1462	0/1:20,0:18:99:275,0,121	0/1:22,0:22:16.20:481,0,16	0/1:37,0:35:1.70:104,0,2	0/1:30,1:31:25.57:759,0,26	0/0:23,0:22:51.16:0,51,4573	0/0:31,0:31:72.25:0,72,7375	1/1:27,0:27:30.10:1204,30,0	0/1:33,0:33:99:512,0,222	1/1:24,0:24:7.13:1208,7,0	0/1:9,0:8:13.94:247,0,14
chr10	65614788	.	GTGTGTGTGTGTGTGTGTGTGTA	G	14240.32	PASS	AB=0.571;AC=27;AF=0.482;AN=56;BaseQRankSum=10.702;DP=785;FS=1.991;HRun=0;HaplotypeScore=330.8765;InbreedingCoeff=0.7418;MQ=52.35;MQ0=15;MQRankSum=-7.120;QD=35.69;ReadPosRankSum=5.055;VQSLOD=2.5806;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:57.16:0,57,4327	1/1:7,6:13:15.02:706,15,0	0/0:31,0:12:15.03:0,15,749	0/0:36,0:12:21.91:0,22,1164	0/0:35,0:35:48.13:0,48,3260	1/1:4,16:20:15.05:823,15,0	0/1:8,16:24:0.13:33,0,0	0/0:24,0:24:40.37:0,40,2328	0/0:29,0:29:60.19:0,60,3784	0/0:28,0:27:50.85:0,51,1614	0/0:15,0:15:12.03:0,12,347	1/1:9,26:35:33.11:1802,33,0	0/0:37,0:37:85.36:0,85,7776	1/1:14,25:38:36.08:1806,36,0	1/1:15,28:43:30.10:1478,30,0	0/0:29,0:29:32.74:0,33,834	0/1:4,20:24:99:665,0,99	0/0:20,0:20:21.07:0,21,1272	1/1:11,9:18:4.86:442,5,0	1/1:5,17:22:15.01:644,15,0	1/1:10,27:35:0.63:152,1,0	1/1:9,22:31:23.99:1023,24,0	0/0:22,0:21:51.16:0,51,4176	0/0:31,0:31:72.25:0,72,6755	1/1:3,23:26:30.10:1669,30,0	0/1:8,25:33:17.93:1078,0,18	1/1:3,20:23:27.09:1568,27,0	1/1:2,7:8:6.02:349,6,0
chr10	65614800	.	GTGTGTGTGTA	G	7253.22	PASS	AB=1.000;AC=35;AF=0.648;AN=54;BaseQRankSum=11.168;DP=706;FS=7.220;HRun=0;HaplotypeScore=211.2307;InbreedingCoeff=0.8380;MQ=48.77;MQ0=16;MQRankSum=-7.475;QD=17.87;ReadPosRankSum=2.759;VQSLOD=3.2427;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:54.64:0,55,1700	1/1:9,0:9:12.04:289,12,0	0/0:28,0:6:12.01:0,12,246	0/0:36,0:12:10.30:0,10,310	0/0:31,0:31:45.08:0,45,1138	1/1:18,0:18:15.05:343,15,0	./.	0/1:15,0:15:42.57:43,0,558	0/0:29,0:29:68:0,68,1034	1/1:4,20:23:50.60:752,51,0	1/1:1,13:14:9.03:167,9,0	1/1:29,0:29:30.99:718,31,0	0/0:38,0:38:95.14:0,95,3532	1/1:33,0:32:30.10:722,30,0	1/1:37,0:37:18.15:499,18,0	1/1:7,22:29:24.08:689,24,0	1/1:25,0:25:17.78:295,18,0	0/0:21,0:21:21.04:0,21,262	1/1:15,0:13:19.16:254,19,0	1/1:21,0:21:11.78:229,12,0	1/1:31,0:29:3.01:52,3,0	1/1:24,0:24:18.04:379,18,0	0/0:21,0:20:27.17:0,27,1827	0/0:31,0:31:87.17:0,87,3193	1/1:23,0:23:30.07:628,30,0	1/1:27,1:27:19.66:403,20,0	1/1:22,0:22:27.09:651,27,0	1/1:9,0:8:6.02:141,6,0
chr10	65614806	.	GTGTA	G	3686.46	PASS	AB=1.000;AC=36;AF=0.667;AN=54;BaseQRankSum=11.471;DP=675;FS=2.480;HRun=0;HaplotypeScore=168.9566;InbreedingCoeff=0.5146;MQ=49.03;MQ0=17;MQRankSum=-6.685;QD=8.67;ReadPosRankSum=4.919;VQSLOD=2.2426;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:62.78:0,63,545	1/1:8,0:8:12.03:122,12,0	0/0:30,0:7:8.02:0,8,73	0/0:36,0:12:13.05:0,13,177	0/0:31,0:31:25.99:0,26,397	1/1:18,0:18:14.77:134,15,0	./.	1/1:14,0:14:9.09:173,9,0	0/1:27,0:27:99:209,0,209	1/1:23,0:22:50.64:433,51,0	0/1:14,0:14:12.15:55,0,12	1/1:29,0:29:15.26:279,15,0	0/0:40,0:40:51.49:0,51,1689	1/1:31,0:30:15.22:285,15,0	0/1:32,0:32:29.17:153,0,29	1/1:25,0:25:23.97:247,24,0	1/1:22,0:22:17.57:132,18,0	1/1:1,20:21:3.47:322,3,0	1/1:12,0:10:18.76:169,19,0	1/1:18,0:18:8.91:91,9,0	1/1:29,0:27:2.94:18,3,0	1/1:23,0:23:3.36:131,3,0	0/0:21,0:20:30.08:0,30,870	0/0:33,0:33:93.11:0,93,1734	1/1:23,0:23:1.31:215,1,0	0/1:27,0:26:13.28:188,0,13	1/1:21,0:21:27.06:274,27,0	1/1:8,0:7:6.01:58,6,0
chr10	65616974	.	A	AGTGTGT	1462.35	PASS	AB=0.927;AC=28;AF=0.609;AN=46;BaseQRankSum=-1.485;DP=409;FS=2.023;HRun=0;HaplotypeScore=107.2604;InbreedingCoeff=0.3474;MQ=58.99;MQ0=11;MQRankSum=-2.255;QD=5.73;ReadPosRankSum=-1.525;VQSLOD=1.7345;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:23:24.05:0,24,356	1/1:3,0:3:3.01:42,3,0	./.	./.	0/0:16,0:16:9.02:0,9,145	./.	1/1:11,0:12:3.97:126,4,0	0/1:25,0:24:14.47:14,0,17	./.	0/1:21,0:20:12.77:13,0,55	0/0:8,0:11:1.77:0,2,4	1/1:9,2:11:5.76:167,6,0	0/0:11,0:12:15.04:0,15,229	./.	1/1:12,4:18:2.69:37,3,0	0/0:2,0:6:0.89:0,1,2	1/1:11,1:18:12.04:238,12,0	0/0:13,0:18:15.05:0,15,209	1/1:16,0:17:12.04:215,12,0	1/1:10,0:16:6.02:77,6,0	1/1:12,1:11:5.96:45,6,0	1/1:8,2:10:6.02:191,6,0	0/0:10,0:10:9.48:0,9,133	0/1:15,0:16:18.09:18,0,511	1/1:19,6:27:1.88:37,2,0	1/1:14,0:14:10.09:153,10,0	0/1:8,0:12:11.96:101,0,12	1/1:16,0:16:9.01:142,9,0
chr10	65617458	.	TG	T	14925.57	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=10.157;DP=648;FS=3.035;HRun=2;HaplotypeScore=68.1029;InbreedingCoeff=0.9966;MQ=89.18;MQ0=0;MQRankSum=-4.103;QD=35.20;ReadPosRankSum=5.030;VQSLOD=5.2856;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:87.25:0,87,1238	1/1:0,5:5:15.05:195,15,0	0/0:23,0:23:69.19:0,69,980	0/0:25,0:25:72.22:0,72,1015	0/0:13,0:13:39.13:0,39,579	1/1:1,27:28:75.24:974,75,0	1/1:2,29:31:72.23:935,72,0	0/0:33,0:33:99:0,99,1466	0/0:29,0:29:87.29:0,87,1303	1/1:1,18:19:51.14:645,51,0	1/1:0,7:7:21.07:273,21,0	1/1:2,26:28:75.24:971,75,0	0/0:31,0:31:93.31:0,93,1391	1/1:0,31:31:84.26:1091,84,0	1/1:3,31:34:96.31:1245,96,0	1/1:0,32:32:83.97:1091,84,0	1/1:0,29:29:78.25:1013,78,0	1/1:1,23:24:66.21:857,66,0	1/1:2,16:18:54.17:694,54,0	1/1:0,22:22:57.19:740,57,0	1/1:0,34:34:93.30:1208,93,0	1/1:0,11:11:33.11:428,33,0	0/0:10,0:10:27.09:0,27,404	0/0:30,0:30:84.28:0,84,1259	1/1:0,12:12:36.12:467,36,0	1/1:0,19:19:57.18:737,57,0	1/1:0,26:26:69.22:896,69,0	1/1:0,14:14:36.12:467,36,0
chr10	65619376	.	TTC	T	698.53	PASS	AB=0.995;AC=29;AF=0.558;AN=52;BaseQRankSum=3.376;DP=628;FS=2.799;HRun=0;HaplotypeScore=110.1199;InbreedingCoeff=0.1712;MQ=70.95;MQ0=28;MQRankSum=1.386;QD=1.88;ReadPosRankSum=-0.727;VQSLOD=2.1195;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:11,10:19:2.98:21,3,0	0/1:12,0:12:1.23:1,0,98	0/0:57,0:27:4.42:0,4,38	0/0:73,0:24:9.25:0,9,70	./.	./.	0/0:15,0:15:15.36:0,15,114	0/1:31,0:29:33.42:33,0,54	0/1:25,0:25:52.20:52,0,66	1/1:21,0:25:34.16:194,34,0	1/1:18,0:16:2.92:17,3,0	1/1:19,0:20:2.79:17,3,0	1/1:17,0:17:23.88:184,24,0	1/1:6,0:17:2.99:23,3,0	0/0:17,0:17:10.31:0,10,134	1/1:25,0:24:2.82:14,3,0	1/1:9,0:9:14.84:110,15,0	0/1:17,0:17:30.98:31,0,58	0/1:19,0:18:3.99:4,0,56	0/0:22,0:21:15.45:0,15,125	0/1:15,0:14:25.14:34,0,25	1/1:15,0:15:5.99:49,6,0	0/0:17,0:17:0:0,0,0	1/1:12,9:20:5.96:44,6,0	0/1:18,0:18:19.70:20,0,77	0/1:21,0:21:3.88:4,0,156	0/1:23,0:22:6.20:6,0,169	0/0:17,0:17:32.90:0,33,262
chr10	65619403	.	TCTCTCTCACTCACACACACACACACACA	T	3435.92	PASS	AB=1.000;AC=16;AF=0.296;AN=54;BaseQRankSum=-0.063;DP=593;FS=1.960;HRun=0;HaplotypeScore=270.3133;InbreedingCoeff=0.0168;MQ=49.91;MQ0=33;MQRankSum=-1.417;QD=12.27;ReadPosRankSum=0.339;VQSLOD=2.2996;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:26:29.39:29,0,966	0/0:10,0:10:11.27:0,11,603	0/0:20,0:4:5.14:0,5,82	0/0:36,0:8:0.69:0,1,182	0/0:31,0:31:12.02:0,12,226	./.	0/0:15,0:12:24.08:0,24,852	0/0:16,0:16:27.87:0,28,886	0/0:22,0:20:35.11:0,35,1305	1/1:30,0:29:74.97:2282,75,0	1/1:4,17:18:2.84:186,3,0	0/1:20,0:19:33.95:34,0,380	0/1:23,0:23:23.73:24,0,3256	0/1:18,0:18:34.75:35,0,208	0/0:22,0:22:22.28:0,22,1296	1/1:2,26:27:9.03:560,9,0	0/1:13,0:12:28.09:28,0,794	0/1:12,0:11:74.30:74,0,375	0/1:15,0:13:19.23:19,0,1321	0/0:23,0:22:21.96:0,22,657	0/0:16,0:14:28.51:0,29,1457	0/1:25,0:25:13.51:38,0,14	0/0:21,0:21:0:0,0,1	0/1:24,0:21:21.44:21,0,1076	0/0:16,0:16:24.08:0,24,922	0/1:22,0:21:99:105,0,2249	0/0:25,0:24:51.31:0,51,3222	0/0:18,0:17:48.15:0,48,2090
chr10	65619407	.	TCTCACTCACACA	T	3055.81	PASS	AB=0.975;AC=34;AF=0.607;AN=56;BaseQRankSum=0.773;DP=558;FS=18.768;HRun=0;HaplotypeScore=167.2874;InbreedingCoeff=-0.2279;MQ=50.55;MQ0=30;MQRankSum=-2.458;QD=6.04;ReadPosRankSum=-0.698;VQSLOD=1.6786;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:24:29.77:30,0,235	0/1:10,0:10:67.02:67,0,218	0/0:12,0:3:3.95:0,4,37	0/1:27,0:7:4.22:4,0,18	1/1:28,0:28:1.25:3,1,0	1/1:25,0:24:3.01:45,3,0	0/1:14,0:11:65.33:65,0,207	0/1:17,0:16:93.96:94,0,113	0/1:20,0:18:19.05:211,0,19	1/1:28,0:27:63.34:902,63,0	1/1:19,0:17:3.01:44,3,0	0/1:6,12:17:6.84:97,0,7	0/1:21,0:21:99:177,0,631	1/1:17,0:17:8.59:154,9,0	0/0:22,0:22:21.20:0,21,390	1/1:28,0:27:9.03:207,9,0	1/1:13,0:12:6.53:216,7,0	1/1:11,0:10:13.34:145,13,0	0/1:16,0:13:99:139,0,221	0/1:22,0:21:25.67:26,0,253	0/1:15,0:13:99:100,0,135	1/1:23,0:23:5.99:50,6,0	0/1:21,0:20:0:0,0,0	0/1:24,0:21:23.75:24,0,329	0/1:17,0:17:99:145,0,160	0/1:20,0:19:99:172,0,505	0/1:25,0:24:98.29:98,0,449	0/0:18,0:17:30.91:0,31,630
chr10	65619409	.	TCA	T	2774.03	PASS	AB=1.000;AC=45;AF=0.900;AN=50;BaseQRankSum=-0.143;DP=545;FS=5.040;HRun=0;HaplotypeScore=117.3514;InbreedingCoeff=0.4093;MQ=49.73;MQ0=27;MQRankSum=2.532;QD=6.35;ReadPosRankSum=1.985;VQSLOD=3.2143;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:24:14.19:102,14,0	1/1:10,0:10:10.51:84,11,0	1/1:8,0:2:0.94:2,1,0	0/0:21,0:5:7.24:0,7,57	./.	1/1:1,24:24:3:25,3,0	1/1:16,0:13:16.72:117,17,0	1/1:2,14:15:40.70:294,41,0	1/1:19,0:18:20.41:123,20,0	1/1:9,0:27:38.26:223,38,0	0/0:19,0:17:0:0,0,0	1/1:18,0:17:6.26:35,6,0	1/1:20,0:20:36.32:232,36,0	1/1:16,0:16:5.94:42,6,0	1/1:21,0:21:3.45:38,3,0	1/1:28,0:27:8.74:51,9,0	0/1:16,0:14:2.13:43,0,2	1/1:10,0:9:10:55,10,0	1/1:7,0:12:29.15:202,29,0	1/1:20,2:21:4.88:28,5,0	1/1:15,0:13:22.93:213,23,0	./.	./.	1/1:24,0:21:20.11:141,20,0	1/1:18,0:18:18.84:175,19,0	1/1:12,0:19:36.96:238,37,0	1/1:25,1:25:43.13:307,43,0	1/1:18,0:17:16.10:101,16,0
chr10	65619413	.	TCACA	T	1953.97	PASS	AB=1.000;AC=42;AF=0.875;AN=48;BaseQRankSum=2.919;DP=530;FS=15.807;HRun=0;HaplotypeScore=132.1763;InbreedingCoeff=0.2538;MQ=50.09;MQ0=26;MQRankSum=-1.898;QD=4.40;ReadPosRankSum=2.312;VQSLOD=1.5284;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:22:0.97:2,1,0	1/1:11,0:11:2.58:44,3,0	./.	./.	1/1:30,0:30:2.97:20,3,0	1/1:25,0:24:3.01:45,3,0	1/1:16,0:13:12.04:177,12,0	1/1:18,0:17:5.95:42,6,0	1/1:19,0:17:9.50:108,9,0	1/1:26,0:26:20.98:183,21,0	0/1:19,0:17:0:0,0,0	1/1:18,0:17:1.59:32,2,0	0/0:22,0:22:13.75:0,14,75	1/1:16,0:16:5.76:81,6,0	1/1:12,11:22:2.88:34,3,0	1/1:28,0:27:9.01:84,9,0	1/1:17,0:15:3.06:45,3,0	./.	1/1:15,0:12:9.03:119,9,0	1/1:10,0:19:2.94:18,3,0	1/1:16,0:14:12.04:164,12,0	./.	0/0:21,0:20:0:0,0,0	0/1:25,0:22:7.72:22,0,8	1/1:17,0:17:12.04:179,12,0	1/1:20,0:19:3.70:241,4,0	1/1:24,0:23:21.49:298,21,0	1/1:15,0:14:9.03:119,9,0
chr10	65619630	.	GGTGTGTGTGTGTGT	G	1440.08	PASS	AC=22;AF=0.478;AN=46;BaseQRankSum=5.180;DP=549;FS=0.920;HRun=0;HaplotypeScore=203.3074;InbreedingCoeff=0.7183;MQ=67.67;MQ0=15;MQRankSum=-2.731;QD=7.42;ReadPosRankSum=2.024;VQSLOD=2.7131;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:23:21.07:0,21,979	1/1:5,1:6:5.85:131,6,0	./.	./.	0/0:19,0:19:24.08:0,24,1257	1/1:18,4:21:3.01:117,3,0	0/0:28,0:28:5.86:0,6,253	0/0:28,0:26:9.03:0,9,246	0/0:12,0:15:15.05:0,15,577	0/0:25,0:26:29.13:0,29,760	0/0:20,0:20:9.01:0,9,347	1/1:8,1:9:3.01:117,3,0	0/0:18,0:17:27.09:0,27,1450	1/1:13,0:13:3.01:98,3,0	1/1:19,6:26:12.04:446,12,0	0/0:13,0:14:18.06:0,18,864	1/1:21,0:21:6:53,6,0	0/0:20,0:20:24.07:0,24,452	1/1:16,3:18:2.63:134,3,0	1/1:12,3:15:9.03:323,9,0	1/1:41,0:39:11.39:57,11,0	./.	0/0:13,0:13:18.06:0,18,716	0/0:34,0:33:24.08:0,24,1103	1/1:11,0:11:2.90:16,3,0	./.	./.	1/1:5,4:9:3.01:117,3,0
chr10	65619684	.	T	TAC	7724.55	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-0.385;DP=505;FS=14.966;HRun=0;HaplotypeScore=84.5934;InbreedingCoeff=0.8979;MQ=68.16;MQ0=13;MQRankSum=-0.612;QD=26.10;ReadPosRankSum=1.515;VQSLOD=5.1572;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:60.17:0,60,806	1/1:7,0:7:21.04:283,21,0	0/0:25,0:10:25.53:0,26,346	0/0:33,0:24:27.26:0,27,658	0/0:22,0:21:42.14:0,42,591	1/1:15,0:15:33.10:501,33,0	1/1:16,2:18:45.10:641,45,0	0/0:23,0:21:51:0,51,655	0/0:19,0:18:45.12:0,45,576	1/1:4,23:27:66.20:949,66,0	1/1:0,12:12:3.95:58,4,0	1/1:14,0:14:36.09:531,36,0	0/0:13,0:13:36.10:0,36,496	1/1:11,0:11:30.07:428,30,0	1/1:25,0:24:51.02:689,51,0	1/1:11,0:11:27.05:400,27,0	1/1:18,0:18:32.78:481,33,0	0/0:16,0:15:40.95:0,41,553	1/1:8,0:8:24.07:377,24,0	1/1:21,0:21:48.06:708,48,0	1/1:4,36:42:2.90:49,3,0	1/1:0,7:7:3.01:34,3,0	0/0:9,0:9:27.09:0,27,365	0/0:20,1:20:33.07:0,33,446	1/1:15,0:15:39.13:625,39,0	1/1:1,11:13:35.99:543,36,0	1/1:0,18:18:2.43:39,2,0	1/1:13,0:12:27.08:390,27,0
chr10	65619814	.	G	GGAGA	3731.98	PASS	AB=0.885;AC=37;AF=0.740;AN=50;BaseQRankSum=-0.589;DP=553;FS=15.578;HRun=0;HaplotypeScore=116.1012;InbreedingCoeff=0.4408;MQ=65.98;MQ0=9;MQRankSum=0.775;QD=10.40;ReadPosRankSum=-0.478;VQSLOD=2.1886;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:27:14.53:0,15,125	1/1:9,0:9:6.01:75,6,0	./.	./.	0/0:30,0:30:3.46:0,3,25	0/1:24,1:24:5.83:227,0,6	0/1:21,0:22:37.30:56,0,37	1/1:36,0:36:12.04:92,12,0	0/1:9,2:14:40.01:64,0,40	1/1:19,0:20:28.79:477,29,0	1/1:24,0:26:15.04:216,15,0	1/1:11,6:17:3.01:70,3,0	0/0:19,0:18:12:0,12,137	1/1:13,0:15:12.02:201,12,0	1/1:20,0:22:6.02:125,6,0	1/1:10,0:12:9.02:162,9,0	1/1:16,0:21:27.09:558,27,0	1/1:11,0:11:9.03:169,9,0	1/1:11,0:11:5.99:50,6,0	1/1:16,0:16:14.79:188,15,0	1/1:16,0:19:12.02:216,12,0	1/1:12,0:12:6.02:86,6,0	0/0:16,0:16:3.01:0,3,45	0/0:20,0:23:11.91:0,12,166	1/1:6,0:7:3.01:66,3,0	1/1:16,9:25:30.08:541,30,0	1/1:10,4:18:8.50:94,8,0	./.
chr10	65620081	.	C	CT	6148.81	PASS	AB=0.583;AC=29;AF=0.518;AN=56;BaseQRankSum=-9.754;DP=516;FS=0.000;HRun=10;HaplotypeScore=56.8017;InbreedingCoeff=0.9096;MQ=77.06;MQ0=0;MQRankSum=-0.892;QD=24.60;ReadPosRankSum=0.364;VQSLOD=5.2466;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:50.92:0,51,419	0/1:2,5:7:6.60:142,0,7	0/0:10,0:10:14.74:0,15,115	0/0:11,0:11:13.68:0,14,95	0/0:31,2:33:51.68:0,52,622	1/1:2,17:19:45.11:480,45,0	1/1:1,11:12:5.43:260,5,0	0/0:30,1:31:59.87:0,60,490	0/0:13,0:13:32.95:0,33,271	0/0:30,2:33:27.94:0,28,626	0/0:30,0:31:79.92:0,80,646	1/1:0,12:12:33.08:352,33,0	0/0:20,0:22:52.23:0,52,420	1/1:2,8:10:21.05:224,21,0	1/1:1,14:15:17.46:388,17,0	0/0:15,0:15:38.95:0,39,320	1/1:3,22:25:16.88:590,17,0	0/0:13,0:13:31.46:0,31,265	1/1:4,16:20:48.09:497,48,0	1/1:1,22:23:41.48:635,41,0	1/1:0,28:28:69.17:736,69,0	1/1:0,5:5:12.03:128,12,0	0/0:20,0:22:49.94:0,50,400	0/0:9,0:9:20.97:0,21,172	1/1:2,10:12:30.04:307,30,0	1/1:7,24:32:53.34:739,53,0	1/1:1,24:25:48.12:512,48,0	1/1:0,5:5:15.04:160,15,0
chr10	65620415	.	GTC	G	1449.43	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=11.750;DP=707;FS=3.079;HRun=0;HaplotypeScore=96.4908;InbreedingCoeff=0.9929;MQ=92.14;MQ0=1;MQRankSum=-3.581;QD=21.32;ReadPosRankSum=0.165;VQSLOD=3.7100;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,148,2969	0/0:6,0:6:18.06:0,18,366	0/0:29,0:29:72.29:0,72,1583	0/0:32,0:32:93.75:0,94,1644	0/0:33,0:33:96.33:0,96,1887	0/0:18,0:18:54.19:0,54,1084	0/0:26,0:26:75.26:0,75,1474	0/0:34,0:34:96.32:0,96,1905	0/0:22,0:22:66.23:0,66,1339	1/1:5,15:20:30.04:477,30,0	1/1:7,19:26:37.76:480,38,0	0/0:19,0:19:54.17:0,54,1061	0/0:31,0:31:90.31:0,90,1800	0/0:27,0:27:81.28:0,81,1631	0/0:33,0:33:99:0,99,1854	1/1:2,20:22:63.10:635,63,0	0/0:24,0:24:72.25:0,72,1446	0/0:17,0:16:48.16:0,48,962	0/0:26,0:26:75.26:0,75,1498	0/0:19,0:19:57.18:0,57,1107	0/0:35,0:35:99:0,105,2001	0/0:24,0:24:69.24:0,69,1365	0/0:18,0:18:51.17:0,51,1021	0/0:31,0:31:90.29:0,90,1785	0/0:24,0:24:72.25:0,72,1439	0/0:26,2:28:17.39:0,17,1467	0/0:25,0:25:75.24:0,75,1488	0/0:8,0:8:24.08:0,24,485
chr10	65620418	.	AG	A	1128.69	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=11.705;DP=695;FS=0.000;HRun=1;HaplotypeScore=82.5654;InbreedingCoeff=0.9976;MQ=93.05;MQ0=1;MQRankSum=-2.369;QD=17.64;ReadPosRankSum=0.594;VQSLOD=3.7173;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,147,2316	0/0:7,0:7:21.07:0,21,334	0/0:30,0:30:90.29:0,90,1391	0/0:31,1:32:64.56:0,65,1325	0/0:32,0:32:93.26:0,93,1388	0/0:17,0:17:51.17:0,51,815	0/0:23,0:23:66.23:0,66,1053	0/0:34,0:34:96.29:0,96,1451	0/0:23,0:23:69.22:0,69,1077	1/1:3,15:18:33.76:393,34,0	1/1:2,21:23:47.62:363,48,0	0/0:19,0:19:54.18:0,54,863	0/0:28,0:28:84.29:0,84,1343	0/0:26,0:26:78.27:0,78,1242	0/0:31,0:31:93.32:0,93,1482	1/1:3,20:23:65.65:516,66,0	0/0:24,0:24:72.25:0,72,1151	0/0:19,0:18:54.18:0,54,852	0/0:28,0:28:81.24:0,81,1240	0/0:18,0:18:54.17:0,54,840	0/0:32,0:32:96.33:0,96,1535	0/0:23,0:23:66.21:0,66,1030	0/0:18,0:18:51.16:0,51,789	0/0:31,0:31:90.27:0,90,1381	0/0:23,0:23:69.24:0,69,1103	0/0:26,2:28:31.32:0,31,1190	0/0:28,0:28:84.25:0,84,1292	0/0:8,0:8:24.06:0,24,355
chr10	65626106	.	TCA	T	4693.88	PASS	AB=0.962;AC=25;AF=0.446;AN=56;BaseQRankSum=0.645;DP=497;FS=3.640;HRun=0;HaplotypeScore=88.7519;InbreedingCoeff=0.6388;MQ=59.64;MQ0=11;MQRankSum=-1.477;QD=20.15;ReadPosRankSum=2.136;VQSLOD=5.2238;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:72.61:0,73,1038	1/1:7,0:7:18.06:233,18,0	0/0:30,0:14:27.27:0,27,453	0/0:25,0:13:26.89:0,27,419	0/0:15,0:15:45.15:0,45,709	1/1:16,0:16:33.07:422,33,0	1/1:28,0:25:18.76:499,19,0	0/0:18,0:18:39.09:0,39,616	0/0:19,0:19:45.13:0,45,675	0/0:16,0:16:44.02:0,44,673	0/0:9,0:8:23.80:0,24,299	0/1:17,0:15:18.59:326,0,19	0/0:16,0:16:45.14:0,45,691	0/1:22,0:22:21.41:379,0,21	0/1:21,1:20:60.38:280,0,60	0/0:26,0:26:48.12:0,48,656	1/1:19,0:18:44.70:509,45,0	0/0:11,0:11:23.87:0,24,351	1/1:3,0:2:5.75:53,6,0	1/1:18,0:17:20.61:251,21,0	1/1:18,0:17:32.84:413,33,0	0/1:11,1:12:7.86:172,0,8	0/0:11,0:10:27.09:0,27,440	0/0:38,0:38:99:0,99,1548	1/1:13,0:12:24.02:267,24,0	0/1:12,1:13:8.98:300,0,9	1/1:13,1:14:29.63:331,30,0	1/1:11,0:9:22.58:257,23,0
chr10	65627496	.	C	CGGGG	4839.42	PASS	AB=0.863;AC=34;AF=0.654;AN=52;BaseQRankSum=4.930;DP=300;FS=0.000;HRun=1;HaplotypeScore=69.8929;InbreedingCoeff=0.4082;MQ=36.83;MQ0=40;MQRankSum=-5.033;QD=23.04;ReadPosRankSum=-1.151;VQSLOD=1.1284;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:24:48.16:0,48,921	1/1:7,0:5:9.03:134,9,0	./.	./.	0/0:10,0:9:24:0,24,392	1/1:14,0:13:14.98:167,15,0	0/1:7,0:6:46.61:75,0,47	1/1:10,0:9:21.07:533,21,0	1/1:11,2:7:12.01:255,12,0	1/1:9,4:12:33.11:759,33,0	0/1:3,3:6:1.78:206,0,2	0/1:12,0:10:99:142,0,99	0/0:10,0:9:21.07:0,21,411	1/1:7,0:5:9.03:123,9,0	1/1:8,0:8:12.04:164,12,0	1/1:7,0:7:3.01:63,3,0	0/1:10,0:7:47.99:81,0,48	0/1:12,5:13:11.76:512,0,12	1/1:11,0:11:30.10:416,30,0	1/1:14,0:15:6.02:90,6,0	0/0:9,0:6:5.89:0,6,74	1/1:9,0:8:24.08:371,24,0	0/0:20,0:19:48.16:0,48,935	0/0:13,0:11:21.07:0,21,412	1/1:13,0:10:15.05:216,15,0	0/1:9,0:10:37.82:280,0,38	1/1:9,0:8:15.01:200,15,0	1/1:2,0:1:3.01:50,3,0
chr10	65627497	.	G	GGGGAAAAAA	14736.25	PASS	AB=0.867;AC=36;AF=0.692;AN=52;BaseQRankSum=4.307;DP=387;FS=6.489;HRun=0;HaplotypeScore=145.7144;InbreedingCoeff=0.4420;MQ=34.93;MQ0=40;MQRankSum=-5.777;QD=50.64;ReadPosRankSum=-3.789;VQSLOD=3.6241;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:26:40.69:0,41,1332	1/1:6,4:9:18.06:714,18,0	./.	./.	0/0:12,0:11:23.94:0,24,652	1/1:3,7:12:12.04:520,12,0	0/1:6,2:7:6:302,0,6	1/1:8,0:11:23.75:715,24,0	1/1:10,0:5:5.99:79,6,0	1/1:17,0:20:52.40:1456,52,0	1/1:8,0:10:24.08:688,24,0	0/1:11,4:14:90.53:652,0,91	0/0:15,0:14:20.41:0,20,542	1/1:9,0:7:11.97:255,12,0	1/1:6,1:11:21.07:651,21,0	1/1:4,0:11:15.04:419,15,0	0/1:15,1:13:19.12:687,0,19	0/1:11,0:10:45.30:453,0,45	1/1:6,6:14:38.63:1308,39,0	1/1:9,9:19:24.01:822,24,0	0/1:6,1:6:79.33:175,0,79	1/1:11,6:13:39.13:1432,39,0	0/0:20,0:19:48.09:0,48,1433	0/0:17,0:15:20.58:0,21,627	1/1:6,5:11:21.07:776,21,0	0/1:12,0:9:37.34:494,0,37	1/1:21,3:20:48.02:1420,48,0	1/1:10,0:8:18.06:718,18,0
chr10	65627504	.	AGAACC	A	4683.11	PASS	AB=0.990;AC=23;AF=0.426;AN=54;BaseQRankSum=0.757;DP=404;FS=147.942;HRun=0;HaplotypeScore=95.7343;InbreedingCoeff=-0.4917;MQ=34.17;MQ0=44;MQRankSum=-2.069;QD=16.15;ReadPosRankSum=0.374;VQSLOD=-0.4009;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:27:28.14:0,28,1329	0/1:9,0:8:60.45:60,0,227	./.	0/0:4,0:1:2.80:0,3,13	0/0:20,0:19:13.09:0,13,785	0/1:13,0:12:99:185,0,215	1/1:8,0:6:12.20:184,12,0	0/1:12,0:11:80.49:80,0,406	1/1:6,2:5:6.02:103,6,0	0/1:27,1:26:99:729,0,417	0/1:13,1:13:41.76:457,0,42	0/1:14,0:12:99:244,0,203	0/0:17,1:17:33.80:0,34,578	0/1:13,0:7:63.03:63,0,339	0/1:8,0:7:99:155,0,126	0/1:9,0:9:99:160,0,201	0/1:16,0:13:99:175,0,301	0/1:11,0:8:37.10:218,0,37	0/1:15,1:15:99:289,0,328	0/1:17,0:17:99:162,0,335	0/1:8,0:5:47.59:48,0,74	0/1:19,0:14:78.93:398,0,79	0/0:20,0:20:53.77:0,54,925	0/0:16,0:14:4.59:0,5,520	0/1:14,0:11:99:229,0,242	0/1:15,0:13:99:347,0,155	0/1:25,1:22:99:389,0,394	0/1:12,0:9:8.12:8,0,310
chr10	65627509	.	C	CAAAAA	4938.80	PASS	AB=0.989;AC=41;AF=0.732;AN=56;BaseQRankSum=0.794;DP=436;FS=2.558;HRun=19;HaplotypeScore=121.2710;InbreedingCoeff=0.7167;MQ=39.44;MQ0=40;MQRankSum=-6.365;QD=14.27;ReadPosRankSum=-0.870;VQSLOD=0.5189;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:28:1.52:2,0,256	1/1:11,0:10:11.99:141,12,0	0/1:13,0:1:0:0,0,0	0/0:8,0:4:5.72:0,6,42	0/0:21,0:22:10.78:0,11,314	1/1:14,0:13:14.40:156,14,0	1/1:9,0:7:15:208,15,0	1/1:15,0:14:14.81:154,15,0	1/1:10,0:7:8.84:69,9,0	1/1:26,0:26:48.61:676,49,0	1/1:13,0:12:25.88:365,26,0	1/1:13,0:11:18.01:264,18,0	0/0:18,0:17:29.77:0,30,312	1/1:14,0:8:3.01:49,3,0	1/1:10,0:9:14.96:135,15,0	1/1:11,0:11:14.99:206,15,0	1/1:14,1:12:14.93:200,15,0	0/0:7,0:5:6.02:0,6,65	1/1:18,1:18:33.03:420,33,0	1/1:20,1:21:19.41:272,19,0	1/1:7,0:5:5.99:61,6,0	1/1:18,0:14:24.49:248,24,0	0/0:17,0:19:26.06:0,26,276	0/0:13,0:14:6.12:0,6,205	1/1:15,1:13:23.87:360,24,0	1/1:20,0:18:35.48:513,35,0	1/1:28,0:24:43.16:436,43,0	0/1:12,0:9:3.43:3,0,18
chr10	65628547	.	A	AT	7820.95	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-15.341;DP=701;FS=2.676;HRun=11;HaplotypeScore=77.2727;InbreedingCoeff=0.9570;MQ=74.43;MQ0=3;MQRankSum=-1.031;QD=21.60;ReadPosRankSum=1.124;VQSLOD=5.5730;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:14.76:0,15,284	1/1:0,10:10:21.04:212,21,0	0/0:32,0:26:12.45:0,12,201	0/0:21,0:15:1.03:0,1,58	0/0:27,0:27:61.78:0,62,468	1/1:2,18:21:53.94:532,54,0	1/1:5,7:13:20.62:178,21,0	0/0:37,0:37:85.43:0,85,649	0/0:23,0:24:70.77:0,71,538	0/0:14,0:41:58.43:0,58,186	0/0:5,0:25:37.52:0,38,108	1/1:6,15:21:18.78:373,19,0	0/0:34,0:34:80.64:0,81,623	1/1:2,17:19:39.08:396,39,0	1/1:1,25:26:66.13:670,66,0	0/0:3,0:12:18.32:0,18,53	1/1:4,22:27:42.74:600,43,0	0/0:2,0:14:20.36:0,20,59	1/1:14,21:36:34.31:660,34,0	1/1:6,35:41:99:1018,102,0	1/1:3,9:13:29.89:288,30,0	1/1:4,17:21:51.26:533,51,0	0/0:26,0:27:64.74:0,65,491	0/0:27,0:27:59.99:0,60,468	1/1:5,25:30:39.96:559,40,0	1/1:6,29:36:77.76:804,78,0	1/1:8,30:39:46.55:819,47,0	1/1:2,7:9:18.03:179,18,0
chr10	65628905	.	CT	C	7134.01	PASS	AB=0.763;AC=38;AF=0.679;AN=56;BaseQRankSum=8.940;DP=686;FS=2.005;HRun=12;HaplotypeScore=76.2446;InbreedingCoeff=0.8173;MQ=74.73;MQ0=1;MQRankSum=-0.253;QD=14.65;ReadPosRankSum=3.686;VQSLOD=5.7028;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:76.88:0,77,730	1/1:0,12:12:29.88:232,30,0	0/1:21,1:17:6.66:7,0,119	0/0:19,0:16:7.44:0,7,45	0/0:23,0:25:62.79:0,63,602	1/1:4,24:28:53.78:418,54,0	1/1:4,14:19:37.88:285,38,0	0/0:26,0:28:74.78:0,75,713	0/0:27,0:28:68.89:0,69,653	1/1:9,27:38:74.55:550,75,0	1/1:3,18:23:54.84:407,55,0	1/1:5,17:24:42.90:314,43,0	0/0:22,1:24:39.71:0,40,565	1/1:6,28:35:18.81:499,19,0	1/1:6,28:37:47.36:521,47,0	1/1:5,31:36:80.66:627,81,0	1/1:2,17:19:44.82:348,45,0	1/1:2,10:13:22.95:168,23,0	1/1:8,14:25:47.90:339,48,0	1/1:3,28:32:73.68:563,74,0	1/1:4,14:18:23.89:186,24,0	1/1:0,18:18:47.80:371,48,0	0/0:25,1:26:33.88:0,34,525	0/0:16,0:16:30.05:0,30,298	1/1:4,14:19:40.84:308,41,0	1/1:3,18:21:23.68:365,24,0	0/1:8,24:33:17.73:419,0,18	1/1:3,11:15:4.47:208,4,0
chr10	65632422	.	TTG	T	11016.20	PASS	AB=0.625;AC=37;AF=0.661;AN=56;BaseQRankSum=4.861;DP=806;FS=1.960;HRun=0;HaplotypeScore=111.4243;InbreedingCoeff=0.8958;MQ=63.25;MQ0=9;MQRankSum=0.498;QD=22.86;ReadPosRankSum=3.004;VQSLOD=5.6507;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,1:30:13.02:0,13,1047	1/1:5,13:18:27.08:319,27,0	0/0:50,1:25:8.60:0,9,433	0/0:37,1:24:24.08:0,24,374	0/0:46,1:47:81.81:0,82,1676	1/1:6,17:23:3.64:521,4,0	1/1:3,13:17:38.95:438,39,0	0/0:26,0:26:21.07:0,21,327	0/0:32,0:32:69.23:0,69,1082	1/1:7,26:33:78.18:888,78,0	1/1:7,27:34:78.02:844,78,0	1/1:4,21:25:41.98:497,42,0	0/0:33,0:33:72.21:0,72,1076	0/1:10,15:25:4.87:404,0,5	1/1:13,25:38:66.20:782,66,0	1/1:4,17:21:45.14:533,45,0	1/1:6,21:27:63.18:746,63,0	1/1:3,10:13:24.07:284,24,0	1/1:6,9:15:24.06:270,24,0	1/1:8,25:33:80.12:928,80,0	1/1:10,22:32:42.13:497,42,0	1/1:8,26:34:78.20:908,78,0	0/0:12,0:31:50.98:0,51,464	0/0:8,0:36:65.98:0,66,577	1/1:2,19:21:45.14:533,45,0	1/1:6,17:23:45.12:521,45,0	1/1:7,32:39:81.19:958,81,0	1/1:5,6:11:12.04:142,12,0
chr10	65633697	.	C	CT	394.88	PASS	AB=0.966;AC=10;AF=0.179;AN=56;BaseQRankSum=-2.914;DP=479;FS=0.000;HRun=15;HaplotypeScore=81.8754;InbreedingCoeff=0.1152;MQ=73.65;MQ0=4;MQRankSum=-0.449;QD=2.31;ReadPosRankSum=-1.588;VQSLOD=-0.6896;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:17:33.08:0,33,183	0/0:8,0:8:4.21:0,4,20	0/0:35,0:13:5.43:0,5,65	0/1:20,0:13:3.83:4,0,54	0/0:23,1:27:29.35:0,29,280	0/0:23,0:23:4.97:0,5,14	0/0:8,0:8:1.98:0,2,6	1/1:7,16:27:3.62:302,4,0	1/1:1,7:10:7.97:84,8,0	0/0:20,0:20:22.96:0,23,92	0/1:21,0:21:36.60:54,0,37	0/0:10,0:10:4.44:0,4,20	0/1:14,2:19:20.78:21,0,96	0/0:11,0:10:12.03:0,12,43	0/0:23,0:23:4.85:0,5,35	0/0:13,0:13:3.37:0,3,62	0/1:27,1:28:0.98:1,0,62	0/1:24,2:26:45.09:45,0,51	0/0:17,0:17:10.78:0,11,48	0/1:20,0:20:8.02:10,0,8	0/0:3,0:3:2.04:0,2,6	0/0:13,0:13:1.79:0,2,14	0/0:8,0:8:17.63:0,18,108	0/0:9,0:9:23.53:0,24,144	0/0:11,0:11:2.84:0,3,8	0/0:15,0:15:14.24:0,14,53	0/0:33,0:33:1.40:0,1,34	0/0:4,0:4:0:0,0,0
chr10	65633711	.	TTA	T	2580.47	PASS	AB=0.966;AC=28;AF=0.500;AN=56;BaseQRankSum=2.133;DP=529;FS=5.617;HRun=0;HaplotypeScore=86.4561;InbreedingCoeff=0.1844;MQ=78.73;MQ0=5;MQRankSum=0.866;QD=7.19;ReadPosRankSum=1.862;VQSLOD=2.9035;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:56.92:0,57,684	0/1:7,0:7:20.50:20,0,29	0/0:39,0:16:24.33:0,24,307	0/1:29,0:21:2.53:3,0,122	0/0:31,0:31:55.03:0,55,1110	1/1:22,2:24:11.48:125,11,0	1/1:6,1:7:8.20:56,8,0	0/0:28,0:28:80.18:0,80,919	0/0:13,0:13:26.91:0,27,277	0/1:24,0:24:99:131,0,101	0/1:27,1:28:99:197,0,152	0/1:13,0:13:9.02:160,0,9	0/0:19,0:19:32.20:0,32,659	1/1:7,8:14:15.76:146,16,0	0/1:17,0:17:45.95:46,0,62	0/1:14,1:15:79.74:118,0,80	0/1:25,3:28:6.36:296,0,6	0/1:27,0:27:99:109,0,111	0/1:14,2:16:7.56:154,0,8	1/1:7,14:21:37.09:303,37,0	1/1:2,1:3:5.61:48,6,0	0/1:16,1:17:1.38:109,0,1	0/0:9,0:9:27.05:0,27,378	0/0:10,0:10:30.07:0,30,419	1/1:13,1:14:11.15:200,11,0	0/1:17,1:18:1.65:224,0,2	1/1:25,5:30:5.76:307,6,0	1/1:6,0:6:2.60:10,3,0
chr10	65633712	.	TA	T	5688.15	PASS	AB=0.968;AC=39;AF=0.696;AN=56;BaseQRankSum=1.568;DP=514;FS=1.804;HRun=3;HaplotypeScore=68.7694;InbreedingCoeff=0.8544;MQ=79.84;MQ0=5;MQRankSum=-1.928;QD=16.25;ReadPosRankSum=-0.553;VQSLOD=4.2339;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:48.93:0,49,446	1/1:1,5:6:12.04:142,12,0	0/0:36,0:16:18.45:0,18,210	0/1:29,1:22:33.01:33,0,88	0/0:30,0:30:56.74:0,57,800	1/1:2,20:22:35.99:392,36,0	1/1:1,6:7:8.92:89,9,0	0/0:27,0:27:71.18:0,71,618	0/0:12,0:12:24.37:0,24,188	1/1:11,13:24:32.80:274,33,0	1/1:28,0:28:35.90:298,36,0	1/1:10,3:13:27.75:244,28,0	0/0:19,0:19:43.89:0,44,476	1/1:10,4:13:26.86:247,27,0	1/1:3,13:16:21:236,21,0	1/1:14,1:15:16.63:182,17,0	1/1:16,12:28:76.31:707,76,0	1/1:23,3:26:48.10:378,48,0	1/1:6,10:16:38.12:337,38,0	1/1:16,4:20:53.33:413,53,0	1/1:1,2:3:5.97:55,6,0	1/1:2,14:16:33.08:271,33,0	0/0:9,0:9:27.03:0,27,289	0/0:10,0:10:28.63:0,29,271	1/1:9,5:14:32.95:309,33,0	1/1:4,14:18:46.92:377,47,0	1/1:14,14:28:68.96:668,69,0	1/1:0,6:6:3.01:36,3,0
chr10	65634027	.	T	TTTATCATCA	23963.69	PASS	AB=1.000;AC=34;AF=0.607;AN=56;BaseQRankSum=-12.193;DP=533;FS=5.877;HRun=0;HaplotypeScore=122.6651;InbreedingCoeff=0.6826;MQ=59.64;MQ0=2;MQRankSum=-14.628;QD=69.26;ReadPosRankSum=3.184;VQSLOD=4.2163;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:72.19:0,72,1808	1/1:9,0:9:21.07:854,21,0	0/0:11,0:11:27.09:0,27,693	0/0:12,0:12:24.08:0,24,689	0/0:32,0:32:87.26:0,87,2320	0/1:24,0:24:8.85:1303,0,9	1/1:15,0:15:15.05:475,15,0	0/0:29,0:29:63.17:0,63,1414	0/0:19,0:19:45.14:0,45,1218	1/1:25,0:25:48.09:1531,48,0	1/1:14,0:13:30.10:1141,30,0	0/1:19,0:19:9.85:1301,0,10	0/0:23,0:23:63.19:0,63,1687	1/1:19,0:19:42.14:1703,42,0	1/1:32,0:32:60.21:2378,60,0	1/1:19,0:19:45.15:1827,45,0	0/1:7,0:7:19.38:234,0,19	1/1:12,0:12:15.05:528,15,0	1/1:23,0:23:24.50:1101,25,0	1/1:18,0:18:36.12:1215,36,0	1/1:2,4:7:2.49:121,2,0	1/1:9,0:9:15.05:613,15,0	0/0:23,0:23:69.22:0,69,1925	0/0:11,0:11:33.10:0,33,874	1/1:20,0:19:22.16:1603,22,0	1/1:32,0:32:79.12:2788,79,0	1/1:30,0:30:44.23:2429,44,0	0/1:12,0:12:34.88:819,0,35
chr10	65634029	.	T	TATCATCATC	32129.35	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-12.628;DP=601;FS=2.661;HRun=0;HaplotypeScore=123.5728;InbreedingCoeff=0.9589;MQ=58.17;MQ0=2;MQRankSum=-14.270;QD=78.94;ReadPosRankSum=1.594;VQSLOD=5.2329;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:72.22:0,72,1843	1/1:1,10:11:24.08:1113,24,0	0/0:13,0:13:33.10:0,33,749	0/0:13,0:13:30.10:0,30,760	0/0:32,0:32:81.28:0,81,2218	1/1:4,19:25:36.12:1679,36,0	1/1:3,14:17:18.06:705,18,0	0/0:28,0:28:57.15:0,57,1235	0/0:20,0:20:42.14:0,42,1170	1/1:4,21:25:57.06:2050,57,0	1/1:7,11:17:36.12:1582,36,0	1/1:6,14:21:36.12:1678,36,0	0/0:24,0:24:66.18:0,66,1614	1/1:6,16:22:51.18:2332,51,0	1/1:6,27:33:60.21:2731,60,0	1/1:4,18:24:54.19:2515,54,0	1/1:5,5:11:4.64:680,5,0	1/1:7,7:14:18.06:761,18,0	1/1:14,17:33:73.47:2091,73,0	1/1:3,18:21:36.12:1426,36,0	1/1:8,1:9:6:164,6,0	1/1:5,6:13:21.07:972,21,0	0/0:25,0:25:69.22:0,69,1905	0/0:11,0:11:33.11:0,33,842	1/1:8,15:22:45.15:2018,45,0	1/1:6,27:35:90.29:3557,90,0	1/1:10,24:37:69.24:3094,69,0	1/1:4,8:15:21.07:980,21,0
chr10	65636779	.	G	GT	5586.99	PASS	AB=0.788;AC=38;AF=0.679;AN=56;BaseQRankSum=-5.847;DP=544;FS=2.887;HRun=12;HaplotypeScore=72.8701;InbreedingCoeff=0.5853;MQ=64.28;MQ0=2;MQRankSum=-0.016;QD=14.25;ReadPosRankSum=1.545;VQSLOD=5.5922;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:23,3:26:0.09:0,0,303	1/1:2,2:7:5.85:43,6,0	0/0:16,0:10:14.07:0,14,125	0/1:13,0:9:14.44:14,0,64	0/0:22,0:25:53.81:0,54,367	1/1:2,14:17:14.87:287,15,0	1/1:2,8:11:17.90:161,18,0	0/0:8,0:31:16.40:0,16,85	0/0:2,0:13:22.17:0,22,64	1/1:6,21:26:32.11:451,32,0	1/1:5,11:17:36.03:339,36,0	0/1:9,7:16:4.37:238,0,4	0/0:23,2:25:17.65:0,18,296	1/1:5,11:16:24.51:235,25,0	1/1:4,17:22:4.11:350,4,0	1/1:6,15:22:41.90:394,42,0	0/1:5,7:13:13.92:189,0,14	1/1:8,26:34:31.29:612,31,0	1/1:4,13:18:2.56:308,3,0	1/1:7,18:27:5.10:303,5,0	1/1:7,10:19:4.76:172,5,0	1/1:0,13:14:29.83:266,30,0	0/0:23,1:27:1.75:0,2,273	0/0:14,0:15:31.80:0,32,225	1/1:8,10:18:23.73:357,24,0	1/1:2,11:13:11.09:256,11,0	1/1:4,20:24:23.15:387,23,0	1/1:3,10:14:7.98:226,8,0
chr10	65637042	.	GC	G	1340.69	PASS	AC=8;AF=0.154;AN=52;BaseQRankSum=6.263;DP=498;FS=1.311;HRun=3;HaplotypeScore=80.2130;InbreedingCoeff=0.9135;MQ=44.47;MQ0=17;MQRankSum=-2.712;QD=14.26;ReadPosRankSum=0.765;VQSLOD=2.8236;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:42:99:0,114,1619	0/0:5,0:5:9.03:0,9,126	./.	./.	0/0:18,0:18:36.12:0,36,518	0/0:18,0:18:24.08:0,24,334	0/0:17,0:15:36.11:0,36,486	0/0:21,0:17:45.15:0,45,646	0/0:20,0:20:57.19:0,57,820	1/1:0,31:25:69.18:803,69,0	1/1:2,17:15:18.04:204,18,0	0/0:20,0:19:18.06:0,18,251	0/0:28,0:28:84.26:0,84,1171	0/0:15,0:13:18.06:0,18,248	0/0:17,0:17:42.14:0,42,586	1/1:0,22:13:15.04:179,15,0	0/0:9,0:7:15.05:0,15,211	1/1:1,21:15:27.05:309,27,0	0/0:12,0:10:27.09:0,27,377	0/0:20,0:20:33.11:0,33,461	0/0:10,0:9:18.03:0,18,217	0/0:17,0:16:21.06:0,21,279	0/0:22,0:22:53.90:0,54,757	0/0:28,0:28:81.26:0,81,1147	0/0:14,0:13:15.05:0,15,212	0/0:17,0:14:36.07:0,36,465	0/0:15,0:11:27.07:0,27,360	0/0:5,0:4:3.01:0,3,42
chr10	65637755	.	T	TAA	7483.06	PASS	AB=1.000;AC=41;AF=0.732;AN=56;BaseQRankSum=-4.734;DP=634;FS=0.997;HRun=14;HaplotypeScore=91.9863;InbreedingCoeff=0.8632;MQ=81.23;MQ0=6;MQRankSum=-0.961;QD=15.69;ReadPosRankSum=-0.846;VQSLOD=3.9340;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:38.29:0,38,323	1/1:3,10:14:29.94:341,30,0	0/0:37,0:22:5.30:0,5,50	0/0:30,0:24:18.34:0,18,148	0/0:18,0:18:38.79:0,39,317	1/1:5,20:28:37.80:419,38,0	1/1:12,9:23:58.22:578,58,0	1/1:7,2:24:6.32:164,6,0	0/0:13,0:13:19.90:0,20,174	1/1:9,11:24:32.40:335,32,0	1/1:5,13:21:43.47:457,43,0	1/1:6,11:19:24.64:256,25,0	0/1:27,0:27:8.10:8,0,277	1/1:7,10:18:18.67:202,19,0	1/1:5,27:33:42.09:517,42,0	1/1:4,27:34:49.49:876,49,0	1/1:5,17:23:32.47:399,32,0	1/1:1,12:15:24.07:305,24,0	1/1:12,1:14:11.49:87,11,0	1/1:7,12:22:29.90:298,30,0	1/1:2,14:17:33.10:420,33,0	1/1:5,15:26:38.88:402,39,0	0/0:17,0:17:21.90:0,22,254	0/0:13,0:16:29.03:0,29,211	1/1:1,18:23:28.18:300,28,0	1/1:7,13:21:34.14:317,34,0	1/1:7,30:39:54.16:685,54,0	1/1:2,8:10:9.03:118,9,0
chr10	65640839	.	AT	A	11106.59	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=14.036;DP=602;FS=2.021;HRun=8;HaplotypeScore=85.3573;InbreedingCoeff=0.9977;MQ=76.65;MQ0=0;MQRankSum=-0.793;QD=25.30;ReadPosRankSum=4.130;VQSLOD=5.4100;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:81.23:0,81,965	1/1:0,14:14:36.06:348,36,0	0/0:16,0:16:32.67:0,33,391	0/0:7,0:7:17.25:0,17,173	0/0:39,0:39:99:0,111,1320	1/1:1,21:22:60.10:579,60,0	1/1:0,16:16:39.06:377,39,0	1/1:3,22:25:66.08:631,66,0	1/1:0,17:17:48.08:464,48,0	1/1:3,25:28:75.12:724,75,0	1/1:2,20:22:57.09:550,57,0	1/1:1,21:22:60.09:577,60,0	0/0:25,0:25:69.20:0,69,822	1/1:1,15:16:39.06:377,39,0	1/1:2,22:24:63.10:608,63,0	1/1:0,12:12:33.05:319,33,0	1/1:2,34:36:99:946,99,0	1/1:1,12:13:33.05:319,33,0	1/1:2,17:20:53.12:498,53,0	1/1:3,29:32:81.12:782,81,0	1/1:0,9:9:27.04:261,27,0	1/1:1,25:26:72.11:695,72,0	0/0:30,0:30:81.23:0,81,959	0/0:15,0:15:45.12:0,45,522	1/1:2,17:19:51.08:493,51,0	1/1:4,23:27:69.10:662,69,0	1/1:2,23:25:66.10:637,66,0	1/1:5,9:14:27.04:261,27,0
chr10	65641590	.	T	TCTTGTCAG	42113.51	PASS	AB=0.544;AC=37;AF=0.661;AN=56;BaseQRankSum=-13.232;DP=658;FS=0.322;HRun=0;HaplotypeScore=131.9601;InbreedingCoeff=0.9204;MQ=68.10;MQ0=0;MQRankSum=-16.922;QD=93.38;ReadPosRankSum=3.255;VQSLOD=5.4651;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,117,3177	1/1:4,12:18:36.08:1484,36,0	0/0:25,0:25:62.35:0,62,1681	0/0:18,0:18:48.15:0,48,1203	0/0:20,0:20:54.17:0,54,1412	1/1:2,27:35:75.26:3333,75,0	1/1:4,14:24:45.11:1844,45,0	0/0:26,0:26:72.24:0,72,2000	0/0:14,0:14:42.13:0,42,1125	1/1:3,16:27:72.22:2714,72,0	1/1:2,23:34:72.12:2658,72,0	1/1:2,26:30:81.23:3489,81,0	0/0:29,0:29:81.28:0,81,2230	1/1:4,19:26:57.12:2304,57,0	1/1:5,18:29:63.11:2464,63,0	0/1:5,20:31:10.87:2998,0,11	1/1:4,10:16:36.12:1598,36,0	1/1:0,8:13:21.07:937,21,0	1/1:8,5:18:54.18:1918,54,0	1/1:3,26:33:87.18:3465,87,0	1/1:2,3:9:12.04:527,12,0	1/1:3,15:21:48.08:1902,48,0	0/0:21,0:21:60.19:0,60,1530	0/0:15,0:15:39.13:0,39,1060	1/1:2,13:15:42.10:1749,42,0	1/1:4,18:26:69.22:2827,69,0	1/1:6,21:34:72.16:2964,72,0	1/1:4,8:12:21.07:936,21,0
chr10	65642299	.	T	TTGAC	27926.94	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-16.405;DP=788;FS=2.020;HRun=0;HaplotypeScore=113.5011;InbreedingCoeff=0.9985;MQ=73.83;MQ0=1;MQRankSum=-5.571;QD=57.70;ReadPosRankSum=2.195;VQSLOD=6.4024;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,151,2818	1/1:0,15:15:33.11:834,33,0	0/0:25,0:22:34.53:0,35,738	0/0:23,0:20:27.93:0,28,582	0/0:26,0:26:69.19:0,69,1170	1/1:2,24:28:57.19:1449,57,0	1/1:1,22:26:48.16:1240,48,0	0/0:31,0:31:78.23:0,78,1350	0/0:27,0:27:75.24:0,75,1379	1/1:2,28:36:99:2289,102,0	1/1:0,19:23:54.19:1453,54,0	1/1:1,17:19:39.13:1051,39,0	0/0:35,0:35:99:0,99,1808	1/1:0,33:35:81.28:2135,81,0	1/1:3,27:35:72.72:1917,73,0	1/1:1,29:33:78.27:2104,78,0	1/1:1,20:23:48.16:1263,48,0	1/1:0,24:24:54.19:1445,54,0	1/1:3,20:26:75.12:1607,75,0	1/1:4,17:23:42.14:1088,42,0	1/1:2,27:31:69.21:1758,69,0	1/1:1,18:19:45.15:1183,45,0	0/0:35,0:35:96.26:0,96,1722	0/0:51,0:51:99:0,138,2555	1/1:2,19:19:45.15:1206,45,0	1/1:2,19:22:60.19:1481,60,0	1/1:2,33:38:72.25:1939,72,0	1/1:0,6:6:18.06:485,18,0
chr10	65643232	.	A	AAAG	3733.15	PASS	AB=1.000;AC=26;AF=0.464;AN=56;BaseQRankSum=4.018;DP=589;FS=7.130;HRun=0;HaplotypeScore=103.5697;InbreedingCoeff=-0.0206;MQ=66.81;MQ0=2;MQRankSum=1.010;QD=9.22;ReadPosRankSum=4.593;VQSLOD=2.2005;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:31:63.12:0,63,735	0/1:13,0:13:20.78:21,0,84	0/1:37,0:16:12.44:12,0,90	0/0:25,0:13:7.03:0,7,123	0/0:23,0:23:39.07:0,39,447	0/1:15,0:15:34.82:82,0,35	0/1:13,0:13:11.99:12,0,57	0/0:26,0:25:45.03:0,45,503	0/0:12,0:12:19.51:0,20,111	1/1:5,13:20:45.01:528,45,0	1/1:6,16:22:47.88:657,48,0	1/1:15,0:15:6.84:47,7,0	0/0:18,0:18:39.08:0,39,458	0/1:19,0:18:35.69:127,0,36	0/1:22,0:22:43.03:81,0,43	1/1:7,10:17:18.05:313,18,0	0/1:25,0:25:89.80:140,0,90	1/1:8,20:29:37.26:838,37,0	0/1:19,0:19:61.92:62,0,85	0/1:24,0:24:63.86:191,0,64	0/1:13,0:13:8.60:9,0,114	0/1:18,0:18:97.44:140,0,97	0/0:25,0:25:51.65:0,52,563	0/0:23,0:23:50.80:0,51,596	0/1:12,0:11:31.49:42,0,31	0/1:29,0:29:99:128,0,118	0/1:29,0:29:95.22:185,0,95	1/1:14,0:14:11.19:118,11,0
chr10	65644146	.	A	AG	1212.12	PASS	AB=0.952;AC=39;AF=0.929;AN=42;BaseQRankSum=0.856;DP=112;FS=26.283;HRun=0;HaplotypeScore=56.6586;InbreedingCoeff=-0.0796;MQ=79.29;MQ0=0;MQRankSum=-4.006;QD=13.47;ReadPosRankSum=0.581;VQSLOD=1.9218;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	1/1:1,1:2:5.98:57,6,0	0/1:4,0:6:17.37:17,0,44	0/1:2,0:6:2.12:41,0,2	1/1:0,2:6:3.01:45,3,0	./.	1/1:0,3:8:3.01:32,3,0	1/1:0,2:2:5.99:67,6,0	1/1:0,2:2:3.01:45,3,0	1/1:0,1:5:15.03:181,15,0	1/1:0,3:4:3.01:35,3,0	1/1:0,3:4:3.01:32,3,0	./.	1/1:0,1:1:3.01:40,3,0	./.	1/1:0,2:8:6.01:60,6,0	./.	1/1:0,0:2:6.02:87,6,0	1/1:0,4:6:17.97:205,18,0	./.	0/1:1,1:6:0:0,0,0	1/1:1,3:5:3.01:44,3,0	1/1:1,0:1:3:25,3,0	./.	1/1:1,0:3:3.01:42,3,0	1/1:0,1:2:6.02:81,6,0	1/1:0,2:7:9.03:102,9,0	1/1:0,1:4:6.89:59,7,0
chr10	65644164	.	TCCCCCTC	T	1368.45	PASS	AB=1.000;AC=27;AF=0.964;AN=28;BaseQRankSum=1.300;DP=66;FS=13.222;HRun=0;HaplotypeScore=54.0098;InbreedingCoeff=0.0981;MQ=41.88;MQ0=2;MQRankSum=-1.734;QD=29.12;ReadPosRankSum=1.445;VQSLOD=1.9383;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	0/1:2,0:2:0.53:1,0,31	./.	./.	1/1:1,4:5:3.01:71,3,0	./.	1/1:0,2:2:3.01:80,3,0	1/1:0,4:4:12.04:284,12,0	1/1:0,1:1:3.01:79,3,0	./.	./.	./.	./.	1/1:0,6:6:6.02:147,6,0	./.	1/1:0,2:2:3.01:67,3,0	1/1:0,2:2:6.02:139,6,0	./.	1/1:0,5:5:0.47:1,0,0	1/1:0,4:4:3.48:81,3,0	./.	./.	1/1:0,3:3:3.01:80,3,0	1/1:0,1:1:3.01:70,3,0	1/1:0,7:7:9.03:238,9,0	1/1:0,3:3:6.02:112,6,0
chr10	65645143	.	TCCAC	T	659.30	PASS	AB=1.000;AC=8;AF=0.143;AN=56;BaseQRankSum=5.195;DP=504;FS=1.338;HRun=0;HaplotypeScore=91.9321;InbreedingCoeff=0.7013;MQ=69.96;MQ0=10;MQRankSum=-1.736;QD=8.35;ReadPosRankSum=1.006;VQSLOD=2.5021;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:37:73.89:0,74,989	0/0:7,0:7:17.99:0,18,155	0/0:25,0:16:27.52:0,28,353	0/0:34,0:25:47.37:0,47,573	0/0:18,0:18:50.33:0,50,652	0/0:20,0:19:30:0,30,278	0/1:29,0:29:5.24:5,0,406	0/0:21,0:21:60.49:0,60,697	0/0:18,0:18:45.05:0,45,603	1/1:0,8:9:26.96:375,27,0	1/1:8,1:9:17.97:148,18,0	0/0:8,0:8:20.86:0,21,196	0/0:25,0:25:59.11:0,59,758	0/0:12,0:12:29.34:0,29,291	0/0:18,0:18:47.81:0,48,406	1/1:0,16:18:15.05:267,15,0	0/0:22,0:22:17.22:0,17,351	0/0:9,0:9:14.35:0,14,134	0/1:12,0:11:10.61:11,0,172	0/0:13,0:13:32.89:0,33,309	0/0:29,0:28:12.57:0,13,535	0/0:19,0:19:16.35:0,16,260	0/0:11,0:11:19.23:0,19,300	0/0:31,0:30:69.01:0,69,1044	0/0:16,0:16:12.24:0,12,213	0/0:16,0:16:20.09:0,20,368	0/0:9,0:9:25.16:0,25,193	0/0:6,0:5:12:0,12,108
chr10	65645144	.	CCA	C	1805	PASS	AB=0.840;AC=37;AF=0.712;AN=52;BaseQRankSum=1.074;DP=511;FS=1.505;HRun=0;HaplotypeScore=72.7970;InbreedingCoeff=0.3370;MQ=68.33;MQ0=11;MQRankSum=0.596;QD=5.14;ReadPosRankSum=-0.365;VQSLOD=2.6556;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:42:28.83:0,29,296	1/1:7,0:7:9.02:98,9,0	./.	./.	0/0:16,0:20:15.01:0,15,155	1/1:8,12:19:9.02:99,9,0	0/1:20,8:29:26.88:102,0,27	0/0:22,0:22:9:0,9,111	0/0:18,0:18:20.90:0,21,167	1/1:9,0:9:14.04:67,14,0	0/1:11,0:9:0:0,0,0	1/1:6,2:8:6.01:66,6,0	0/1:18,5:23:14.91:15,0,186	0/1:8,4:12:27.47:87,0,27	1/1:10,7:17:15.04:165,15,0	1/1:18,0:18:13.85:69,14,0	1/1:12,10:23:23.90:245,24,0	1/1:9,0:10:6.64:33,7,0	1/1:13,0:12:11.52:73,12,0	1/1:9,4:13:9.02:96,9,0	0/1:29,0:27:24.11:138,0,24	1/1:10,8:19:14.71:146,15,0	0/1:7,4:11:24.11:24,0,81	0/1:26,6:31:2.98:3,0,333	1/1:8,7:16:14.66:146,15,0	1/1:14,0:15:14.86:139,15,0	1/1:8,1:9:3.01:33,3,0	1/1:1,5:5:12.03:132,12,0
chr10	65645178	.	A	ACT	222.60	PASS	AB=0.516;AC=1;AF=0.018;AN=56;BaseQRankSum=4.171;DP=567;FS=3.839;HRun=0;HaplotypeScore=88.6689;InbreedingCoeff=0.5061;MQ=63.60;MQ0=19;MQRankSum=0.161;QD=13.91;ReadPosRankSum=1.373;VQSLOD=3.5250;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:39:30.51:0,31,394	0/0:12,0:12:32.93:0,33,265	0/0:21,0:13:27.01:0,27,276	0/0:28,0:13:22.76:0,23,230	0/0:21,0:21:16.27:0,16,286	0/0:24,0:23:35.88:0,36,283	0/0:26,0:26:53.72:0,54,459	0/0:20,0:19:55.94:0,56,500	0/1:1,15:16:2.04:297,0,2	0/0:11,0:11:29.86:0,30,257	0/0:17,0:15:23.92:0,24,193	0/0:15,0:15:38.70:0,39,299	0/0:16,0:16:32.95:0,33,344	0/0:14,0:14:38.74:0,39,308	0/0:16,0:15:38.93:0,39,315	0/0:18,0:18:28.87:0,29,292	0/0:26,0:26:50.86:0,51,403	0/0:17,0:17:12.14:0,12,286	0/0:16,0:14:34.29:0,34,249	0/0:15,0:15:38.78:0,39,295	0/0:36,0:32:65.33:0,65,516	0/0:29,0:29:62.79:0,63,492	0/0:19,0:19:44.83:0,45,396	0/0:31,0:30:62.96:0,63,666	0/0:23,0:22:53.44:0,53,418	0/0:14,0:14:38.89:0,39,320	0/0:12,0:12:35.73:0,36,275	0/0:14,0:14:38.85:0,39,303
chr10	65647568	.	TTGCTGTGCTGGGCTG	T	1200	PASS	AC=6;AF=0.111;AN=54;BaseQRankSum=4.887;DP=413;FS=6.861;HRun=0;HaplotypeScore=175.7023;InbreedingCoeff=0.8054;MQ=100.82;MQ0=1;MQRankSum=-4.207;QD=57.14;ReadPosRankSum=0.541;VQSLOD=3.0109;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:42.10:0,42,1837	0/0:2,0:2:6.02:0,6,254	0/0:27,0:23:51.17:0,51,1585	0/0:46,0:40:57.83:0,58,2290	0/0:3,0:3:3.01:0,3,143	0/0:7,0:7:15.05:0,15,820	0/0:33,0:33:93.32:0,93,4573	0/0:21,0:21:54.14:0,54,2054	0/0:14,0:14:33.11:0,33,1516	1/1:2,4:6:9.03:387,9,0	./.	0/0:13,0:13:33.11:0,33,1744	0/0:8,0:8:15.05:0,15,819	0/0:19,0:19:54.19:0,54,2459	0/0:11,0:11:30.10:0,30,1678	1/1:0,5:5:9.03:384,9,0	0/0:29,0:29:69.22:0,69,3536	1/1:5,5:10:15.05:555,15,0	0/0:13,0:13:33.11:0,33,1765	0/0:7,0:7:21.04:0,21,929	0/0:35,0:35:84.29:0,84,4156	0/0:12,0:12:24.08:0,24,951	0/0:7,0:7:21.06:0,21,877	0/0:33,0:33:84.28:0,84,4238	0/0:5,0:5:12.04:0,12,680	0/0:13,0:13:39.13:0,39,2307	0/0:11,0:11:24.08:0,24,1348	0/0:2,0:2:6.02:0,6,345
chr10	65648734	.	GTGGA	G	7072.86	PASS	AB=0.769;AC=18;AF=0.321;AN=56;BaseQRankSum=16.962;DP=863;FS=16.601;HRun=0;HaplotypeScore=309.8877;InbreedingCoeff=-0.4756;MQ=53.70;MQ0=0;MQRankSum=-15.878;QD=12.13;ReadPosRankSum=-2.493;VQSLOD=2.6666;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:38:76.01:0,76,1977	0/1:9,1:10:19.80:20,0,263	0/0:35,0:35:63.38:0,63,1670	0/0:35,0:34:87.29:0,87,1955	0/0:24,0:24:60.17:0,60,1459	0/1:24,11:35:99:390,0,969	0/1:19,5:24:99:178,0,909	0/0:35,0:35:90.29:0,90,2142	0/0:35,0:35:99:0,102,2563	0/1:24,9:33:99:341,0,925	0/1:12,11:24:99:366,0,357	0/1:20,11:31:99:334,0,832	0/0:27,0:27:75.24:0,75,1774	0/1:16,20:36:99:826,0,617	0/1:28,17:46:99:654,0,1141	0/1:19,18:37:99:707,0,976	0/1:24,6:30:99:264,0,947	0/1:20,5:25:99:207,0,565	0/1:37,6:43:99:267,0,1515	0/1:16,17:34:99:780,0,725	0/1:39,3:41:99:100,0,735	0/1:13,9:22:99:408,0,321	0/0:17,0:17:45.14:0,45,1087	0/0:28,0:28:81.28:0,81,1974	0/1:22,13:35:99:393,0,884	0/1:31,7:38:99:255,0,1700	0/1:22,16:37:99:584,0,1082	0/0:5,0:5:12.04:0,12,290
chr10	65648751	.	TGGAA	T	11163.30	PASS	AB=0.681;AC=18;AF=0.321;AN=56;BaseQRankSum=17.147;DP=842;FS=16.874;HRun=0;HaplotypeScore=316.1040;InbreedingCoeff=-0.4742;MQ=54.28;MQ0=0;MQRankSum=-16.326;QD=20.04;ReadPosRankSum=3.725;VQSLOD=3.0197;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:85.72:0,86,2478	0/1:4,1:5:14.83:43,0,15	0/0:39,0:36:99:0,108,2411	0/0:40,0:39:78.89:0,79,2383	0/0:21,0:21:60.21:0,60,1607	0/1:17,11:28:99:495,0,482	0/1:15,10:25:99:322,0,576	0/0:35,0:35:99:0,102,2734	0/0:39,0:39:99:0,111,2979	0/1:13,18:31:99:878,0,453	0/1:7,18:25:99:674,0,108	0/1:15,16:31:99:594,0,307	0/0:27,0:27:81.26:0,81,2069	0/1:12,26:38:99:1110,0,247	0/1:20,27:47:99:1238,0,413	0/1:16,22:38:99:902,0,414	0/1:19,17:36:99:475,0,717	0/1:16,7:23:99:454,0,418	0/1:24,8:32:99:466,0,866	0/1:11,20:31:99:799,0,175	0/1:23,14:36:99:130,0,479	0/1:8,9:17:99:326,0,99	0/0:16,0:16:48.16:0,48,1289	0/0:29,0:29:87.28:0,87,2290	0/1:17,17:34:99:572,0,396	0/1:26,13:39:99:624,0,720	0/1:15,25:39:99:1063,0,534	0/0:4,0:4:8.84:0,9,56
chr10	65648763	.	GGATA	G	10008.41	PASS	AB=0.801;AC=25;AF=0.446;AN=56;BaseQRankSum=13.356;DP=829;FS=3.201;HRun=0;HaplotypeScore=335.0739;InbreedingCoeff=0.0428;MQ=54.71;MQ0=0;MQRankSum=-16.521;QD=17.65;ReadPosRankSum=6.242;VQSLOD=3.3860;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:49.77:0,50,2112	1/1:1,2:3:8.77:131,9,0	0/0:34,0:30:90.22:0,90,2179	0/0:40,0:40:99:0,111,2671	0/0:23,0:23:66.21:0,66,1690	0/1:16,7:22:1.88:276,0,2	0/1:19,6:25:57.61:399,0,58	0/0:30,0:30:87.23:0,87,2163	0/0:38,0:38:99:0,114,2993	0/1:25,6:31:99:361,0,573	0/1:23,4:27:99:144,0,326	1/1:20,9:29:29.29:834,29,0	0/0:21,0:21:63.22:0,63,1715	0/1:34,7:41:21.49:751,0,21	1/1:38,11:49:1.94:1013,2,0	0/1:28,10:38:99:709,0,358	0/1:28,5:33:74.54:221,0,75	0/1:18,7:25:99:417,0,276	0/1:19,14:33:99:834,0,197	1/1:24,8:32:26.44:678,26,0	0/1:35,7:42:92.33:319,0,92	0/1:14,6:20:99:135,0,119	0/0:15,0:15:45.14:0,45,1163	0/0:27,0:27:81.28:0,81,2247	0/1:24,11:35:77.93:722,0,78	0/1:25,13:38:64.81:1037,0,65	1/1:32,8:40:30.58:850,31,0	1/1:0,3:3:9.03:178,9,0
chr10	65649031	.	A	ATAGT	17267.52	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-9.666;DP=412;FS=4.385;HRun=0;HaplotypeScore=58.8651;InbreedingCoeff=0.9416;MQ=69.85;MQ0=3;MQRankSum=-6.399;QD=61.23;ReadPosRankSum=3.487;VQSLOD=6.1928;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:66.23:0,66,1213	1/1:1,4:5:12.04:315,12,0	0/0:11,0:9:18.01:0,18,250	0/0:5,0:5:11.69:0,12,134	0/0:24,0:24:72.25:0,72,1320	1/1:0,14:14:33.11:866,33,0	1/1:1,4:5:12.04:309,12,0	0/0:34,0:34:96.31:0,96,1679	0/0:8,0:8:24.08:0,24,446	1/1:2,14:17:48.16:1182,48,0	1/1:1,12:14:36.12:944,36,0	1/1:3,9:12:24.08:630,24,0	0/0:12,0:12:36.12:0,36,672	1/1:3,11:14:33.11:865,33,0	1/1:2,5:7:9.03:236,9,0	1/1:2,12:14:33.11:865,33,0	1/1:3,17:21:54.19:1387,54,0	1/1:2,11:12:30.10:783,30,0	1/1:4,18:23:66.21:1553,66,0	1/1:5,22:27:63.22:1645,63,0	1/1:0,4:4:12.04:288,12,0	1/1:2,4:6:9.03:230,9,0	0/0:8,0:8:24.07:0,24,416	0/0:5,0:5:15.03:0,15,248	1/1:5,26:32:72.25:1837,72,0	1/1:4,19:24:66.23:1682,66,0	1/1:1,20:21:57.20:1495,57,0	1/1:0,4:4:6.02:157,6,0
chr10	65649402	.	TCA	T	11582.35	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=13.953;DP=485;FS=9.756;HRun=0;HaplotypeScore=57.8312;InbreedingCoeff=0.9845;MQ=72.77;MQ0=2;MQRankSum=-0.588;QD=41.66;ReadPosRankSum=3.824;VQSLOD=6.1942;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:60.18:0,60,1180	1/1:0,4:4:6.02:98,6,0	0/0:8,0:7:21.06:0,21,358	0/0:9,0:9:23.13:0,23,223	0/0:19,0:19:57.18:0,57,1120	1/1:0,22:22:57.19:929,57,0	1/1:0,14:14:33.11:538,33,0	0/0:24,0:24:72.23:0,72,1389	0/0:16,0:16:48.16:0,48,975	0/0:16,0:16:48.16:0,48,975	0/0:20,0:20:60.21:0,60,1216	1/1:0,13:13:39.13:636,39,0	0/0:14,0:14:42.14:0,42,853	1/1:0,22:21:57.19:930,57,0	1/1:0,32:32:81.28:1321,81,0	0/0:17,0:17:51.18:0,51,1035	1/1:0,10:10:30.10:489,30,0	0/0:14,0:15:33.98:0,34,839	1/1:0,12:11:30.09:462,30,0	1/1:0,28:28:78.27:1260,78,0	1/1:0,16:16:39.13:636,39,0	1/1:0,13:13:36.12:587,36,0	0/0:17,0:17:51.16:0,51,999	0/0:12,0:12:36.12:0,36,731	1/1:0,21:21:45.15:734,45,0	1/1:1,32:33:38.36:1501,38,0	1/1:0,23:23:48.16:783,48,0	1/1:0,14:15:42.14:679,42,0
chr10	65650414	.	A	AC	5805.30	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-12.181;DP=435;FS=0.000;HRun=8;HaplotypeScore=48.8397;InbreedingCoeff=0.9642;MQ=86.40;MQ0=0;MQRankSum=-1.531;QD=25.02;ReadPosRankSum=2.245;VQSLOD=5.3683;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:45.02:0,45,412	1/1:0,7:7:18.05:208,18,0	0/0:16,0:16:35.18:0,35,294	0/0:14,0:14:14.69:0,15,138	0/0:24,0:24:72.04:0,72,658	1/1:4,20:24:51.15:588,51,0	1/1:3,15:18:33.10:381,33,0	0/0:38,0:38:86.94:0,87,773	0/0:8,0:8:18:0,18,164	0/0:12,0:12:28.99:0,29,259	0/0:16,1:17:13.46:0,13,368	1/1:1,10:11:27.08:312,27,0	0/0:19,0:19:54.02:0,54,494	1/1:4,16:20:42.12:485,42,0	1/1:2,13:15:21.22:334,21,0	0/0:4,0:4:9:0,9,79	1/1:1,18:19:48.14:554,48,0	0/0:6,0:6:14.96:0,15,128	1/1:4,11:15:8.64:353,9,0	1/1:0,21:21:48.10:537,48,0	1/1:4,13:17:11.65:388,12,0	1/1:3,14:17:33.10:381,33,0	0/0:17,0:17:42.01:0,42,380	0/0:10,0:10:27.01:0,27,247	1/1:3,10:13:23.86:255,24,0	1/1:2,14:16:17.95:444,18,0	1/1:1,13:14:36.11:413,36,0	1/1:0,5:5:15.04:173,15,0
chr10	65650842	.	C	CT	11358.54	PASS	AB=0.564;AC=29;AF=0.518;AN=56;BaseQRankSum=-16.954;DP=607;FS=0.984;HRun=3;HaplotypeScore=53.7036;InbreedingCoeff=0.9261;MQ=84.23;MQ0=0;MQRankSum=-3.505;QD=35.17;ReadPosRankSum=2.160;VQSLOD=5.3852;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:69.21:0,69,828	1/1:0,10:10:27.09:378,27,0	0/0:17,0:17:48.13:0,48,562	0/0:21,0:21:50.13:0,50,630	0/0:27,0:27:72.22:0,72,864	1/1:1,22:23:63.21:882,63,0	1/1:1,21:22:57.19:798,57,0	0/0:28,0:28:66.19:0,66,783	0/0:29,0:29:84.26:0,84,1008	0/0:22,0:22:66.20:0,66,792	0/0:25,0:25:69.21:0,69,827	1/1:4,21:25:63.21:882,63,0	0/0:17,0:17:51.14:0,51,593	1/1:1,22:23:60.20:840,60,0	1/1:3,26:29:75.25:1050,75,0	0/0:22,0:22:66.20:0,66,792	1/1:2,21:23:60.20:840,60,0	0/0:9,0:9:18.05:0,18,216	1/1:1,16:17:51.17:712,51,0	1/1:0,24:24:72.15:964,72,0	1/1:3,17:20:48.16:672,48,0	1/1:1,18:19:48.16:672,48,0	0/0:25,0:25:75.23:0,75,900	0/0:19,0:19:57.17:0,57,684	1/1:0,12:12:30.10:420,30,0	0/1:7,24:31:59.78:903,0,60	1/1:3,31:32:78.20:1092,78,0	1/1:0,11:11:18.06:252,18,0
chr10	65651232	.	ATAG	A	1422.64	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.494;DP=546;FS=0.697;HRun=0;HaplotypeScore=74.6641;InbreedingCoeff=0.9994;MQ=78.16;MQ0=0;MQRankSum=-2.557;QD=44.46;ReadPosRankSum=-4.394;VQSLOD=3.7925;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:42.14:0,42,967	0/0:12,0:12:36.12:0,36,830	0/0:15,0:15:42.14:0,42,918	0/0:12,0:12:36.12:0,36,797	0/0:27,0:27:81.28:0,81,1865	0/0:28,0:28:81.28:0,81,1864	0/0:22,0:22:66.23:0,66,1481	1/1:1,31:32:93.28:1518,93,0	0/0:14,0:14:42.14:0,42,922	0/0:21,0:21:60.21:0,60,1384	0/0:31,0:31:87.28:0,87,1962	0/0:14,0:14:42.14:0,42,944	0/0:15,0:15:45.15:0,45,1030	0/0:22,0:22:63.22:0,63,1412	0/0:17,0:17:51.18:0,51,1176	0/0:13,0:13:39.13:0,39,900	0/0:17,0:17:45.09:0,45,1037	0/0:15,0:15:42.14:0,42,935	0/0:17,0:17:48.16:0,48,1107	0/0:22,0:22:63.22:0,63,1429	0/0:16,0:16:42.14:0,42,968	0/0:14,0:14:42.14:0,42,969	0/0:20,0:20:57.20:0,57,1311	0/0:21,0:21:60.21:0,60,1384	0/0:17,0:17:48.16:0,48,1085	0/0:21,0:21:63.22:0,63,1437	0/0:31,0:31:93.32:0,93,2140	0/0:26,0:26:78.18:0,78,1556
chr10	65651960	.	GAA	G	3512.63	PASS	AB=0.500;AC=27;AF=0.500;AN=54;BaseQRankSum=1.173;DP=452;FS=2.313;HRun=2;HaplotypeScore=71.3108;InbreedingCoeff=0.8597;MQ=66.20;MQ0=9;MQRankSum=3.762;QD=17.83;ReadPosRankSum=-0.147;VQSLOD=1.1250;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:26:69.14:0,69,1103	1/1:3,0:3:9.03:138,9,0	0/0:24,0:12:36.12:0,36,655	0/0:23,0:18:49.79:0,50,855	0/0:16,0:16:39.13:0,39,673	./.	1/1:14,0:13:39.08:556,39,0	0/0:24,0:24:72.17:0,72,1205	0/0:17,0:17:47.27:0,47,674	0/0:18,0:17:48.11:0,48,687	0/0:19,0:19:41.99:0,42,489	1/1:0,14:14:2.88:49,3,0	0/0:6,0:6:18.01:0,18,238	1/1:0,11:11:3.01:49,3,0	1/1:0,18:18:12.04:192,12,0	0/0:15,0:15:42.06:0,42,484	1/1:0,20:20:11.60:195,12,0	0/0:18,0:16:45.14:0,45,631	1/1:1,8:9:26.67:358,27,0	1/1:17,1:19:51.15:738,51,0	1/1:0,22:23:9.03:126,9,0	0/1:0,0:10:0.01:0,0,0	0/0:7,0:7:21.06:0,21,350	0/0:19,0:18:42.39:0,42,679	1/1:0,17:17:12.04:184,12,0	1/1:0,21:21:57.12:805,57,0	1/1:0,13:13:8.88:74,9,0	1/1:0,5:5:3.01:49,3,0
chr10	65651962	.	AGTGTGTGTGTGTGTGTGTGTGT	A	2765.86	PASS	AB=0.900;AC=7;AF=0.125;AN=56;BaseQRankSum=6.461;DP=498;FS=8.455;HRun=0;HaplotypeScore=207.8417;InbreedingCoeff=0.5745;MQ=63.37;MQ0=11;MQRankSum=-3.877;QD=40.08;ReadPosRankSum=2.343;VQSLOD=1.5790;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:32:47.76:0,48,3496	0/0:5,0:5:6.02:0,6,502	0/0:23,0:11:3.01:0,3,102	0/0:23,0:18:15.05:0,15,401	0/0:18,0:18:33.11:0,33,2433	0/0:24,0:23:3.90:0,4,309	0/0:17,0:16:23.10:0,23,1581	0/0:27,0:27:42.14:0,42,1811	0/0:18,0:19:12.04:0,12,729	1/1:11,6:16:15.05:655,15,0	1/1:7,11:19:23.99:1063,24,0	0/0:15,0:15:6.02:0,6,586	0/0:11,0:11:12.67:0,13,785	0/0:17,0:17:12.04:0,12,1099	0/0:18,0:18:12.04:0,12,1051	1/1:8,7:15:18.06:1043,18,0	0/0:23,0:22:20.08:0,20,1344	0/1:16,0:16:99:148,0,106	0/0:9,0:9:13.29:0,13,397	0/0:17,0:17:38.60:0,39,2167	0/0:28,0:28:15.05:0,15,1414	0/0:10,0:10:3.01:0,3,239	0/0:7,0:7:15.05:0,15,1301	0/0:24,0:22:42.13:0,42,3028	0/0:19,0:19:15.05:0,15,1446	0/0:22,0:22:33.10:0,33,1335	0/0:14,0:14:9.03:0,9,619	0/0:6,0:5:3.01:0,3,280
chr10	65652280	.	TAAC	T	11943.18	PASS	AB=0.513;AC=29;AF=0.518;AN=56;BaseQRankSum=13.715;DP=497;FS=8.677;HRun=0;HaplotypeScore=74.2599;InbreedingCoeff=0.9183;MQ=74.27;MQ0=0;MQRankSum=-3.080;QD=48.95;ReadPosRankSum=3.567;VQSLOD=7.0088;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:90.31:0,90,2186	1/1:0,5:5:12.04:224,12,0	0/0:19,0:17:35.44:0,35,1092	0/0:12,0:10:22.63:0,23,476	0/0:19,0:19:57.20:0,57,1370	1/1:0,18:18:54.19:1004,54,0	1/1:0,10:10:27.09:503,27,0	0/0:34,0:34:99:0,102,2444	0/0:14,0:14:42.13:0,42,986	0/0:19,0:19:57.20:0,57,1405	0/0:26,0:26:78.26:0,78,1853	1/1:0,15:15:36.12:670,36,0	0/0:14,0:14:42.14:0,42,1007	1/1:0,21:21:54.19:1006,54,0	1/1:0,17:17:39.13:727,39,0	0/0:13,0:13:39.13:0,39,957	1/1:0,22:22:63.22:1174,63,0	0/0:26,0:26:78.27:0,78,1871	1/1:0,14:14:42.14:754,42,0	1/1:0,23:23:66.23:1230,66,0	1/1:0,5:5:9.03:167,9,0	1/1:0,15:15:30.06:523,30,0	0/0:12,0:12:36.09:0,36,806	0/0:14,0:14:42.14:0,42,983	1/1:0,16:16:41.97:782,42,0	0/1:1,19:20:13.77:997,0,14	1/1:0,34:34:93.32:1734,93,0	1/1:0,9:9:24.08:447,24,0
chr10	65653572	.	TA	T	1371.37	PASS	AB=0.929;AC=9;AF=0.161;AN=56;BaseQRankSum=9.646;DP=522;FS=4.293;HRun=11;HaplotypeScore=51.1760;InbreedingCoeff=0.8707;MQ=69.48;MQ0=0;MQRankSum=-1.650;QD=14.29;ReadPosRankSum=1.369;VQSLOD=3.8043;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:48.09:0,48,496	0/0:8,0:8:18.05:0,18,192	0/0:11,0:11:8.08:0,8,93	0/1:12,1:11:5.93:6,0,156	0/0:32,1:35:65.23:0,65,856	0/0:21,1:22:35.50:0,36,577	0/0:10,0:10:24.06:0,24,256	0/0:26,0:26:51.12:0,51,538	0/0:18,0:19:50.96:0,51,526	1/1:7,16:23:47.92:394,48,0	1/1:2,17:19:47.93:394,48,0	0/0:18,1:19:23.39:0,23,427	0/0:12,0:13:29.07:0,29,328	0/0:18,0:18:42.08:0,42,433	0/0:11,0:11:24.06:0,24,256	1/1:5,22:27:39.75:469,40,0	0/0:28,0:28:56.21:0,56,647	1/1:2,12:14:32.95:271,33,0	0/0:23,0:23:57.14:0,57,602	0/0:22,0:22:54.14:0,54,575	0/0:7,0:9:23.89:0,24,238	0/0:17,0:17:42.11:0,42,448	0/0:15,0:15:27.04:0,27,273	0/0:12,0:12:33.08:0,33,352	0/0:26,0:26:62.72:0,63,656	0/0:28,2:31:22.90:0,23,654	0/0:20,0:22:33.86:0,34,497	0/0:11,0:11:30.06:0,30,311
chr10	65655253	.	CGTT	C	3466.22	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=11.650;DP=608;FS=3.487;HRun=0;HaplotypeScore=84.1713;InbreedingCoeff=0.9851;MQ=81.04;MQ0=0;MQRankSum=-2.801;QD=43.33;ReadPosRankSum=1.320;VQSLOD=5.3028;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,117,2651	0/0:15,0:15:45.15:0,45,1020	0/0:23,0:23:36.75:0,37,1233	0/0:13,0:13:33.58:0,34,714	0/0:27,0:27:81.28:0,81,1816	0/0:23,0:23:63.22:0,63,1406	0/0:31,0:31:84.27:0,84,1858	0/0:23,0:23:69.24:0,69,1562	0/0:24,0:24:69.24:0,69,1560	1/1:3,19:22:60.18:969,60,0	1/1:0,18:18:42.14:699,42,0	0/0:18,0:18:51.18:0,51,1155	0/0:22,0:22:66.19:0,66,1441	0/0:19,0:19:54.19:0,54,1224	0/0:22,0:22:66.23:0,66,1478	1/1:0,23:23:63.22:1049,63,0	0/0:18,0:18:54.19:0,54,1222	1/1:0,16:17:45.15:749,45,0	0/0:17,0:17:51.18:0,51,1156	0/0:23,0:23:69.24:0,69,1564	0/0:35,0:35:96.33:0,96,2120	0/0:12,0:12:33.11:0,33,748	0/0:27,0:27:78.27:0,78,1747	0/0:31,0:31:93.32:0,93,2106	0/0:21,0:21:63.22:0,63,1426	0/0:20,1:21:10.25:0,10,1243	0/0:17,0:17:51.16:0,51,1112	0/0:7,0:7:18.06:0,18,386
chr10	65655714	.	C	CT	3840.55	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-9.836;DP=622;FS=0.000;HRun=1;HaplotypeScore=59.3919;InbreedingCoeff=0.9946;MQ=87.55;MQ0=0;MQRankSum=-3.538;QD=42.20;ReadPosRankSum=0.080;VQSLOD=3.7810;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:69.22:0,69,894	0/0:12,0:12:33.11:0,33,428	0/0:21,0:21:59.37:0,59,742	0/0:22,1:23:43.59:0,44,755	0/0:32,0:32:90.29:0,90,1165	0/0:24,0:24:72.23:0,72,935	0/0:11,0:11:33.11:0,33,428	0/0:37,0:37:99:0,111,1404	0/0:19,0:19:57.19:0,57,740	1/1:1,26:27:75.25:1123,75,0	1/1:0,20:20:57.15:829,57,0	0/0:20,0:20:60.18:0,60,765	0/0:14,0:14:42.14:0,42,544	0/0:20,0:20:57.19:0,57,740	0/0:27,0:27:78.25:0,78,1012	1/1:0,23:23:66.22:989,66,0	0/0:16,0:16:14.42:0,14,500	1/1:0,21:21:60.20:899,60,0	0/0:21,0:20:60.19:0,60,779	0/0:25,0:25:69.22:0,69,894	0/0:37,0:37:99:0,111,1441	0/0:29,0:29:81.25:0,81,1038	0/0:14,0:14:33.11:0,33,428	0/0:20,0:20:60.19:0,60,777	0/0:26,0:26:78.25:0,78,1013	0/0:26,0:26:78.25:0,78,1013	0/0:22,0:22:66.21:0,66,856	0/0:12,0:12:30.10:0,30,388
chr10	65656165	.	TATA	T	6467.72	PASS	AB=0.549;AC=29;AF=0.518;AN=56;BaseQRankSum=13.076;DP=361;FS=1.445;HRun=0;HaplotypeScore=53.4394;InbreedingCoeff=0.8551;MQ=67.35;MQ0=3;MQRankSum=-0.809;QD=32.83;ReadPosRankSum=3.436;VQSLOD=4.7773;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:45.13:0,45,914	1/1:1,7:8:21.07:333,21,0	0/0:3,0:3:5.99:0,6,75	0/0:5,0:5:5.99:0,6,77	0/0:25,0:25:72.22:0,72,1464	1/1:5,21:24:54.14:828,54,0	1/1:1,5:6:9.03:143,9,0	0/0:28,0:28:69.23:0,69,1381	0/0:12,0:12:24.08:0,24,525	0/0:19,0:19:51.18:0,51,1112	0/0:14,0:14:30.08:0,30,574	1/1:4,5:9:12.04:190,12,0	0/0:12,0:12:33.11:0,33,717	1/1:1,8:9:18.06:285,18,0	1/1:5,13:18:33.11:523,33,0	0/0:6,0:6:18.06:0,18,394	1/1:2,21:23:51.17:808,51,0	0/0:15,0:15:42.14:0,42,895	1/1:2,8:10:24.08:380,24,0	1/1:4,4:8:9.03:143,9,0	1/1:4,6:10:18.01:257,18,0	1/1:0,4:4:12.04:190,12,0	0/0:4,0:4:6.02:0,6,106	0/0:6,0:6:18.04:0,18,351	1/1:3,10:12:27.09:428,27,0	0/1:5,23:28:99:913,0,119	1/1:1,14:15:36.12:571,36,0	1/1:0,10:10:30.10:476,30,0
chr10	65656527	.	TGGG	T	990.45	PASS	AB=0.733;AC=9;AF=0.161;AN=56;BaseQRankSum=0.469;DP=289;FS=1.527;HRun=13;HaplotypeScore=50.9829;InbreedingCoeff=0.3499;MQ=82.51;MQ0=2;MQRankSum=-0.263;QD=13.95;ReadPosRankSum=5.545;VQSLOD=0.6623;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:17:30.07:0,30,470	0/0:2,0:2:2.99:0,3,23	0/0:28,0:18:14.47:0,14,270	0/0:18,0:11:15.13:0,15,214	0/0:12,0:12:11.51:0,12,133	0/0:12,0:12:11.71:0,12,110	0/0:6,0:7:7.67:0,8,66	0/0:16,0:16:4.19:0,4,74	0/1:7,1:10:24.51:25,0,49	1/1:5,8:14:24.02:291,24,0	0/1:4,6:11:25.60:145,0,26	0/0:8,0:8:6.01:0,6,71	0/0:7,0:7:15.05:0,15,259	0/0:17,0:18:28.48:0,28,287	0/0:9,0:10:13.23:0,13,119	1/1:5,12:18:33.91:408,34,0	0/1:7,0:9:18.17:18,0,120	1/1:2,7:9:21.05:255,21,0	0/0:4,0:4:6.01:0,6,69	0/0:4,0:4:2.99:0,3,23	0/0:9,0:11:12.26:0,12,69	0/0:5,0:6:3.01:0,3,44	0/0:3,0:3:3.01:0,3,57	0/0:9,0:9:15.48:0,15,220	0/0:5,0:5:10.28:0,10,135	0/0:4,0:5:0.80:0,1,42	0/0:6,0:10:13.12:0,13,106	0/0:3,0:5:8.89:0,9,64
chr10	65656538	.	GGGA	G	516.82	PASS	AB=0.961;AC=10;AF=0.179;AN=56;BaseQRankSum=4.204;DP=302;FS=38.298;HRun=0;HaplotypeScore=55.5477;InbreedingCoeff=0.1675;MQ=87.38;MQ0=2;MQRankSum=-0.619;QD=5.33;ReadPosRankSum=4.704;VQSLOD=0.5546;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:35.93:0,36,481	0/0:2,0:2:2.98:0,3,21	0/0:34,0:22:20.10:0,20,437	0/0:23,0:14:11.48:0,11,231	0/0:12,0:12:25.72:0,26,257	0/1:11,0:11:26.08:26,0,126	0/1:6,0:6:1.24:1,0,68	1/1:17,1:18:26.86:213,27,0	0/1:9,0:9:9.72:10,0,134	0/1:12,1:13:70.52:71,0,91	0/1:10,1:11:67.04:67,0,90	0/0:2,0:2:6:0,6,68	0/0:6,0:6:15.05:0,15,245	0/0:17,0:17:26.13:0,26,336	0/0:7,0:7:12.66:0,13,179	1/1:16,1:17:16.67:194,17,0	0/0:8,0:8:0.64:0,1,120	0/1:11,1:12:56.52:80,0,57	0/0:14,0:14:28:0,28,338	0/0:4,0:4:7.55:0,8,65	0/0:14,0:14:30.10:0,30,316	0/0:5,0:5:11.35:0,11,80	0/0:1,0:1:3.01:0,3,56	0/0:7,0:7:18.34:0,18,240	0/0:7,0:7:16.62:0,17,218	0/0:6,0:6:14.14:0,14,122	0/0:13,0:13:28.64:0,29,236	0/0:7,0:7:1.89:0,2,105
chr10	65656623	.	C	CT	466.83	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-4.639;DP=431;FS=4.034;HRun=2;HaplotypeScore=44.1185;InbreedingCoeff=0.9407;MQ=75.75;MQ0=0;MQRankSum=-0.456;QD=31.12;ReadPosRankSum=0.295;VQSLOD=2.9764;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:48.15:0,48,595	0/0:5,0:5:15.05:0,15,186	0/0:11,0:11:30.07:0,30,345	0/0:6,0:6:17.41:0,17,183	0/0:22,0:22:63.17:0,63,756	0/0:24,0:24:66.19:0,66,805	0/0:15,0:15:42.13:0,42,521	0/0:29,0:29:78.19:0,78,930	1/1:1,14:15:39.13:562,39,0	0/0:32,0:32:96.30:0,96,1189	0/0:33,0:33:99:0,99,1215	0/0:8,0:8:24.08:0,24,298	0/0:11,0:11:33.10:0,33,409	0/0:14,0:14:39.11:0,39,471	0/0:13,0:12:39.12:0,39,483	0/0:12,0:12:33.10:0,33,409	0/0:20,0:20:57.18:0,57,707	0/0:12,0:12:30.06:0,30,355	0/0:14,0:14:36.10:0,36,434	0/0:20,0:20:60.16:0,60,719	0/0:5,0:5:15.05:0,15,186	0/0:12,0:12:33.10:0,33,409	0/0:15,0:15:42.13:0,42,521	0/0:11,0:11:27.07:0,27,321	0/0:9,0:9:27.08:0,27,334	0/0:24,0:24:72.21:0,72,871	0/0:14,0:13:42.13:0,42,519	0/0:7,0:7:15.05:0,15,186
chr10	65657204	.	C	CA	8393.51	PASS	AB=0.594;AC=31;AF=0.554;AN=56;BaseQRankSum=-7.007;DP=684;FS=0.306;HRun=9;HaplotypeScore=73.5319;InbreedingCoeff=0.9083;MQ=64.11;MQ0=3;MQRankSum=-1.841;QD=23.91;ReadPosRankSum=2.698;VQSLOD=5.6168;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:55,1:56:99:0,107,1145	1/1:1,8:9:24.06:265,24,0	0/0:28,0:23:38.01:0,38,347	0/0:11,1:9:8.10:0,8,95	0/0:33,0:33:95.98:0,96,833	1/1:3,12:15:10.04:339,10,0	1/1:3,13:15:30.08:332,30,0	0/0:27,1:28:38.27:0,38,548	0/0:15,0:15:35.99:0,36,313	0/0:28,0:28:80.98:0,81,703	0/0:26,0:26:62.96:0,63,543	1/1:3,13:16:27.07:299,27,0	0/0:21,0:21:50.99:0,51,443	1/1:5,14:19:33.09:365,33,0	1/1:4,24:28:66.18:730,66,0	0/0:20,0:20:32.36:0,32,421	1/1:5,25:30:75.51:811,76,0	1/1:8,23:31:63.17:697,63,0	0/1:6,13:19:7.01:373,0,7	1/1:3,31:34:87.19:949,87,0	1/1:4,12:16:7.04:306,7,0	1/1:6,23:30:59.99:644,60,0	0/0:24,0:25:68.01:0,68,575	0/0:39,0:39:99:0,114,983	1/1:2,18:21:15.12:433,15,0	1/1:3,28:31:81.17:874,81,0	1/1:4,23:28:69.02:744,69,0	1/1:0,7:7:21.06:232,21,0
chr10	65660917	.	G	GT	1601.48	PASS	AB=0.933;AC=36;AF=0.643;AN=56;BaseQRankSum=7.943;DP=479;FS=0.000;HRun=13;HaplotypeScore=64.8103;InbreedingCoeff=0.5143;MQ=71.23;MQ0=2;MQRankSum=-2.575;QD=5.04;ReadPosRankSum=0.799;VQSLOD=1.7255;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:19,2:22:7.84:8,0,175	1/1:8,0:8:17.05:88,17,0	0/1:24,0:12:3.64:4,0,37	0/0:32,0:22:4.18:0,4,97	0/0:21,0:22:19.21:0,19,248	1/1:15,0:15:23:120,23,0	1/1:14,0:14:11.01:54,11,0	0/0:25,0:27:33.71:0,34,224	0/1:11,4:15:25.97:26,0,134	0/0:31,1:33:33.42:0,33,367	0/1:14,2:17:12.05:12,0,207	1/1:22,0:22:22.61:118,23,0	0/0:19,0:19:35.60:0,36,246	1/1:13,0:13:19.90:100,20,0	1/1:15,0:15:25.56:129,26,0	0/0:10,0:10:23.75:0,24,161	1/1:19,0:19:0.25:59,0,0	1/1:0,3:3:3:28,3,0	1/1:25,0:24:37.86:274,38,0	1/1:13,0:13:17.22:89,17,0	0/1:1,0:1:0:0,0,0	1/1:1,0:1:2.88:15,3,0	0/1:6,0:6:15.07:15,0,50	0/0:17,0:17:35.66:0,36,246	1/1:23,0:23:40.41:203,40,0	1/1:23,0:23:45.11:246,45,0	1/1:24,1:24:25.97:143,26,0	1/1:14,0:14:11.50:60,12,0
chr10	65660929	.	T	TTTA	6009.98	PASS	AB=1.000;AC=31;AF=0.554;AN=56;BaseQRankSum=-3.979;DP=499;FS=1.377;HRun=0;HaplotypeScore=77.5639;InbreedingCoeff=0.7789;MQ=71.83;MQ0=3;MQRankSum=-0.537;QD=20.24;ReadPosRankSum=1.696;VQSLOD=4.8076;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:54.30:0,54,597	1/1:2,5:8:17.58:282,18,0	0/1:19,0:9:4.76:5,0,88	0/1:28,0:20:9.59:10,0,203	0/0:27,0:27:38.18:0,38,650	1/1:1,13:16:24.08:492,24,0	1/1:0,8:13:12.03:211,12,0	0/0:23,0:23:46.90:0,47,447	0/0:18,0:18:35.04:0,35,411	0/0:34,0:34:83.36:0,83,945	0/0:20,0:20:53:0,53,577	1/1:4,17:23:23.96:338,24,0	0/0:19,0:19:48.03:0,48,617	1/1:5,10:19:20.92:346,21,0	1/1:0,14:18:30.03:541,30,0	0/0:10,0:10:29.98:0,30,348	1/1:4,12:20:2.37:279,2,0	0/0:4,0:4:5.47:0,5,30	1/1:7,13:23:48:535,48,0	1/1:1,10:14:26.99:437,27,0	0/1:3,0:3:0:0,0,0	1/1:0,1:1:3.01:62,3,0	0/0:7,0:7:17.56:0,18,184	0/0:18,0:18:42.07:0,42,564	1/1:0,16:19:42.61:809,43,0	1/1:5,20:30:77.68:955,78,0	1/1:1,19:24:29.80:462,30,0	1/1:1,12:16:12.04:246,12,0
chr10	65662155	.	AACACACAAACACACACACACACACAC	A	1219.22	PASS	AB=0.923;AC=7;AF=0.125;AN=56;BaseQRankSum=4.943;DP=401;FS=1.585;HRun=0;HaplotypeScore=215.5426;InbreedingCoeff=0.7099;MQ=58.74;MQ0=14;MQRankSum=-2.090;QD=25.94;ReadPosRankSum=2.117;VQSLOD=2.1166;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:22:38.69:0,39,2663	0/0:3,0:3:5.98:0,6,49	0/0:37,0:26:52.26:0,52,549	0/0:30,0:18:23.17:0,23,247	0/0:11,0:11:26.98:0,27,619	0/0:15,0:15:36.04:0,36,1755	0/0:11,0:10:24:0,24,633	0/0:32,0:28:72.08:0,72,776	0/0:9,0:9:18.04:0,18,646	1/1:10,0:10:29.89:243,30,0	1/1:0,8:8:3.01:207,3,0	0/0:9,0:8:21.02:0,21,213	0/0:7,0:7:18.03:0,18,635	0/0:8,0:8:23.99:0,24,207	0/0:14,0:14:33.92:0,34,447	1/1:5,11:16:12.38:737,12,0	0/0:27,0:25:51.19:0,51,2598	0/1:11,0:12:50.46:167,0,50	0/0:15,0:12:33.07:0,33,1408	0/0:12,0:12:30.05:0,30,1235	0/0:20,0:20:44.99:0,45,1983	0/0:9,0:8:20.98:0,21,774	0/0:7,0:7:18.04:0,18,792	0/0:15,0:15:39.05:0,39,2909	0/0:13,0:13:15:0,15,1010	0/0:12,0:12:29.86:0,30,1685	0/0:10,0:10:17.99:0,18,533	0/0:5,0:5:12.01:0,12,389
chr10	65662991	.	GA	G	270.61	PASS	AB=0.917;AC=3;AF=0.054;AN=56;BaseQRankSum=4.427;DP=576;FS=5.402;HRun=10;HaplotypeScore=68.0625;InbreedingCoeff=0.6887;MQ=58.04;MQ0=4;MQRankSum=-0.131;QD=10.02;ReadPosRankSum=1.258;VQSLOD=2.6725;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:93.15:0,93,993	0/0:6,0:6:18.05:0,18,199	0/1:10,1:10:4.25:4,0,180	0/0:10,0:9:21.05:0,21,223	0/0:30,0:31:81.05:0,81,877	0/0:17,0:17:42.54:0,43,452	0/0:16,1:16:16.06:0,16,405	0/0:33,0:33:78.18:0,78,849	0/0:22,1:23:40.11:0,40,663	0/0:25,0:25:66.15:0,66,713	0/0:26,0:26:75.16:0,75,816	0/0:17,0:17:18.33:0,18,279	0/0:14,1:15:16.06:0,16,405	0/0:24,0:24:63.15:0,63,686	0/0:20,0:20:57.10:0,57,608	0/0:26,0:26:69.99:0,70,749	0/0:20,0:20:54.10:0,54,581	1/1:2,14:16:41.99:365,42,0	0/0:18,1:19:28.08:0,28,530	0/0:27,0:27:72.15:0,72,781	0/0:15,2:17:16.06:0,16,404	0/0:20,0:20:51.14:0,51,564	0/0:22,0:22:60.16:0,60,662	0/0:17,0:16:48.13:0,48,531	0/0:21,0:21:51.10:0,51,551	0/0:20,0:20:57.15:0,57,630	0/0:26,1:27:55.16:0,55,810	0/0:13,0:13:36.05:0,36,383
chr10	65663658	.	GC	G	3480.96	PASS	AC=34;AF=0.708;AN=48;BaseQRankSum=6.732;DP=406;FS=35.277;HRun=3;HaplotypeScore=37.9405;InbreedingCoeff=0.8565;MQ=25.18;MQ0=106;MQRankSum=-1.275;QD=15.00;ReadPosRankSum=-0.872;VQSLOD=1.0460;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:26:36.12:0,36,516	1/1:2,6:6:9.03:111,9,0	./.	./.	0/0:12,0:5:3.01:0,3,43	1/1:3,13:8:12.04:149,12,0	1/1:8,13:13:21.07:259,21,0	0/0:21,0:11:27.09:0,27,387	0/0:15,0:12:18.06:0,18,259	1/1:7,11:11:30.09:371,30,0	1/1:3,7:7:12.04:148,12,0	1/1:1,12:10:15.05:186,15,0	0/0:13,0:10:15.05:0,15,216	1/1:2,12:9:18.06:223,18,0	1/1:4,8:7:12.02:148,12,0	1/1:5,14:12:24.07:293,24,0	./.	1/1:4,4:6:9.03:111,9,0	1/1:5,5:5:15.05:184,15,0	1/1:5,5:4:3.01:37,3,0	./.	1/1:7,13:12:18.06:223,18,0	0/0:18,0:10:17.95:0,18,257	0/0:23,0:16:21.07:0,21,301	1/1:4,12:11:18.06:220,18,0	1/1:5,12:12:36.11:446,36,0	1/1:2,14:11:24.08:297,24,0	1/1:0,4:3:6.02:74,6,0
chr10	65664099	.	T	TGCATCTTGGGTAATTCGA	50830.15	PASS	AB=0.545;AC=37;AF=0.661;AN=56;BaseQRankSum=-6.827;DP=684;FS=1.073;HRun=0;HaplotypeScore=207.0013;InbreedingCoeff=0.8834;MQ=55.98;MQ0=4;MQRankSum=-16.219;QD=119.04;ReadPosRankSum=1.475;VQSLOD=4.8065;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,132,6281	1/1:3,6:17:27.09:1937,27,0	0/0:22,0:22:57.17:0,57,2324	0/0:17,0:16:45.15:0,45,1933	0/0:35,0:35:90.27:0,90,4498	1/1:4,8:21:33.11:2642,33,0	1/1:7,4:15:24.08:1796,24,0	0/0:27,0:27:72.25:0,72,3008	0/0:18,0:18:51.18:0,51,2626	1/1:9,8:26:69.24:3867,69,0	1/1:12,3:25:33.11:1959,33,0	1/1:5,6:20:21.07:1841,21,0	0/0:36,0:36:92.89:0,93,4580	1/1:4,16:24:57.20:4784,57,0	1/1:8,11:32:57.20:4236,57,0	0/1:5,11:30:99:3544,0,111	1/1:5,4:17:21.07:1443,21,0	1/1:1,1:9:6.02:527,6,0	1/1:6,2:18:45.09:1934,45,0	1/1:12,14:33:75.26:4924,75,0	1/1:3,1:8:12.04:768,12,0	1/1:5,8:19:33.11:2388,33,0	0/0:36,0:36:93.28:0,93,4320	0/0:20,0:20:54.19:0,54,2460	1/1:9,13:30:48.16:3932,48,0	1/1:9,10:25:63.22:4504,63,0	1/1:9,7:29:41.93:3279,42,0	1/1:3,2:8:6.02:527,6,0
chr10	65664755	.	G	GA	7009.51	PASS	AB=0.660;AC=28;AF=0.500;AN=56;BaseQRankSum=-14.553;DP=600;FS=1.061;HRun=10;HaplotypeScore=67.3956;InbreedingCoeff=0.6666;MQ=76.50;MQ0=1;MQRankSum=-0.792;QD=23.06;ReadPosRankSum=0.657;VQSLOD=5.6441;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:74.86:0,75,615	0/1:3,6:9:9.61:113,0,10	0/0:20,0:15:10.16:0,10,77	0/0:22,0:18:4.91:0,5,132	0/0:32,0:32:78.36:0,78,641	1/1:2,20:23:35.37:565,35,0	1/1:1,13:14:36.09:384,36,0	0/0:34,1:35:89.89:0,90,739	0/0:24,1:26:35.96:0,36,491	0/0:19,0:20:40.95:0,41,323	0/0:20,0:20:50.91:0,51,418	1/1:0,13:13:39.09:410,39,0	0/0:27,0:28:76.94:0,77,622	1/1:2,18:20:51.13:544,51,0	1/1:2,20:23:62.99:653,63,0	0/0:15,0:16:37.99:0,38,301	1/1:1,28:29:72.18:768,72,0	0/1:7,1:9:8.97:9,0,131	0/1:4,16:20:16.80:447,0,17	1/1:8,21:30:66.06:665,66,0	1/1:3,10:14:29.74:284,30,0	1/1:5,20:25:35.51:583,36,0	0/0:28,0:28:71.91:0,72,591	0/0:18,0:18:44.94:0,45,369	1/1:4,18:22:4.80:450,5,0	0/1:10,24:34:17.38:654,0,17	1/1:2,15:16:42.11:447,42,0	1/1:1,1:2:3.01:32,3,0
chr10	65665494	.	ACC	A	4519.45	PASS	AB=0.973;AC=31;AF=0.554;AN=56;BaseQRankSum=5.486;DP=458;FS=25.401;HRun=10;HaplotypeScore=72.1240;InbreedingCoeff=0.3254;MQ=64.38;MQ0=2;MQRankSum=-1.365;QD=13.45;ReadPosRankSum=5.625;VQSLOD=1.2741;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:20:40.72:0,41,409	1/1:1,7:8:15.04:167,15,0	0/1:22,0:9:9.81:10,0,34	0/0:26,0:16:2.20:0,2,143	0/0:23,0:24:46.67:0,47,528	1/1:1,14:15:21.06:232,21,0	1/1:6,12:18:29.98:318,30,0	0/1:12,0:13:16.28:16,0,88	0/0:1,0:8:17.47:0,17,60	0/1:16,0:16:21.56:22,0,63	0/1:16,0:16:27.97:28,0,119	0/1:16,0:16:11.38:11,0,147	0/0:9,0:9:20.99:0,21,240	0/1:16,0:17:20.27:20,0,122	1/1:1,14:14:36.10:401,36,0	0/1:17,0:17:52.93:54,0,53	1/1:2,15:17:42.05:452,42,0	0/0:4,0:4:10.56:0,11,58	1/1:4,11:15:32.84:323,33,0	1/1:4,23:28:59.89:647,60,0	1/1:3,13:16:32.92:335,33,0	0/1:13,0:13:12.23:24,0,12	0/0:16,0:16:35.57:0,36,485	0/0:13,0:14:38.59:0,39,516	0/1:18,0:19:37.13:37,0,52	1/1:2,23:25:66.12:720,66,0	1/1:2,21:23:51.12:567,51,0	1/1:0,6:6:12.03:134,12,0
chr10	65665502	.	CCCA	C	388.37	PASS	AB=0.956;AC=11;AF=0.196;AN=56;BaseQRankSum=3.132;DP=460;FS=11.497;HRun=0;HaplotypeScore=94.9125;InbreedingCoeff=0.0265;MQ=61.54;MQ0=2;MQRankSum=-0.057;QD=2.59;ReadPosRankSum=1.755;VQSLOD=1.1876;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:22.14:0,22,614	0/0:7,0:7:12.48:0,12,47	0/0:21,0:7:17.74:0,18,168	0/0:29,0:18:37.47:0,37,372	0/0:23,0:23:47.68:0,48,719	0/0:16,0:16:23.62:0,24,127	0/0:16,0:16:2.60:0,3,84	0/1:15,0:15:17.57:59,0,18	0/0:7,0:7:20.83:0,21,149	0/1:14,1:15:26.04:108,0,26	0/1:17,1:18:62.95:86,0,63	0/1:16,0:16:44.67:45,0,72	0/0:8,0:8:15.02:0,15,246	0/1:13,2:15:73.83:74,0,132	0/0:15,0:14:29.04:0,29,110	0/1:16,2:18:0.31:96,0,0	0/0:18,0:18:15.20:0,15,142	0/1:6,0:6:11:29,0,11	0/0:15,0:15:34.42:0,34,176	0/0:28,0:28:36.37:0,36,229	0/1:15,1:16:20.64:21,0,70	1/1:13,0:12:4.97:10,5,0	0/0:15,0:15:29.93:0,30,597	0/0:15,0:15:42.06:0,42,719	0/1:18,0:18:1.96:2,0,52	0/0:24,0:24:58.07:0,58,229	0/0:25,0:25:51.50:0,51,230	0/0:6,0:6:9.98:0,10,37
chr10	65665503	.	CCA	C	2636.28	PASS	AB=0.952;AC=34;AF=0.607;AN=56;BaseQRankSum=6.915;DP=452;FS=0.469;HRun=0;HaplotypeScore=78.7043;InbreedingCoeff=0.4788;MQ=60.51;MQ0=2;MQRankSum=-1.042;QD=8.40;ReadPosRankSum=6.344;VQSLOD=2.8502;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:41.95:0,42,490	1/1:7,0:7:12.48:50,12,0	0/0:21,0:7:8.99:0,9,78	0/0:28,0:18:5.43:0,5,177	0/0:20,0:21:38.51:0,39,476	0/1:16,0:16:20.62:43,0,21	1/1:16,0:16:2.60:76,3,0	1/1:8,6:14:14.97:147,15,0	0/0:7,0:7:20.21:0,20,108	1/1:7,8:15:27:272,27,0	1/1:9,8:17:26.84:253,27,0	1/1:10,5:15:20.86:212,21,0	0/0:7,0:7:9.03:0,9,141	1/1:11,4:15:5.55:168,6,0	1/1:15,0:14:31.36:131,31,0	1/1:8,10:18:33.03:363,33,0	0/1:19,0:19:5.17:122,0,5	0/1:3,0:5:10.27:38,0,10	0/1:15,0:15:21.90:22,0,63	0/1:28,0:28:20.71:128,0,21	1/1:16,0:16:13.50:114,14,0	1/1:5,8:12:12.04:143,12,0	0/0:14,0:14:27.56:0,28,415	0/0:16,0:16:35.98:0,36,488	1/1:8,8:16:18.06:215,18,0	1/1:24,0:24:27.26:154,27,0	0/1:24,0:24:18.70:137,0,19	1/1:6,0:6:10.66:46,11,0
chr10	65665504	.	CA	C	496.05	PASS	AB=0.925;AC=16;AF=0.286;AN=56;BaseQRankSum=0.914;DP=428;FS=0.504;HRun=1;HaplotypeScore=76.3136;InbreedingCoeff=0.4528;MQ=59.98;MQ0=2;MQRankSum=-0.582;QD=3.82;ReadPosRankSum=1.456;VQSLOD=0.3340;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:38.30:0,38,409	0/0:7,0:7:14.08:0,14,73	0/0:21,0:7:17.98:0,18,165	0/0:28,1:18:21.26:0,21,283	0/0:18,0:18:36.92:0,37,431	0/0:16,0:16:25.94:0,26,150	0/0:17,0:17:20.70:0,21,175	0/1:10,2:12:5.48:61,0,5	1/1:7,0:7:7.36:26,7,0	1/1:12,0:12:3.78:118,4,0	0/1:14,0:14:15.04:93,0,15	1/1:13,0:13:18.63:76,19,0	0/0:5,0:5:10.83:0,11,128	0/1:14,0:14:24.17:57,0,24	0/0:15,0:14:32.29:0,32,164	1/1:16,0:16:30.33:131,30,0	0/0:21,0:21:33.63:0,34,231	0/1:4,0:4:12.31:19,0,12	0/0:15,0:15:43.80:0,44,277	0/0:28,0:28:65:0,65,365	0/0:16,0:16:5.18:0,5,119	1/1:10,0:9:10.71:45,11,0	0/1:10,3:13:0.26:0,0,325	0/0:16,0:16:35.46:0,35,437	0/1:13,2:15:26.90:45,0,27	0/0:24,0:24:66.14:0,66,382	0/0:24,0:24:55.88:0,56,300	0/0:6,0:6:11.16:0,11,53
chr10	65667372	.	A	AT	12794.24	PASS	AB=0.524;AC=37;AF=0.661;AN=56;BaseQRankSum=-17.287;DP=659;FS=1.373;HRun=7;HaplotypeScore=58.5045;InbreedingCoeff=0.9246;MQ=71.21;MQ0=6;MQRankSum=-0.512;QD=31.36;ReadPosRankSum=1.634;VQSLOD=5.1431;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,102,969	1/1:0,12:12:33.10:399,33,0	0/0:28,0:20:46.83:0,47,432	0/0:27,0:16:26.75:0,27,338	0/0:34,0:34:99:0,102,985	1/1:4,20:24:60.18:725,60,0	1/1:1,28:29:69.21:834,69,0	0/0:31,0:31:78.10:0,78,748	0/0:18,0:18:54.05:0,54,513	1/1:3,35:39:99:1283,108,0	1/1:2,15:17:42.09:491,42,0	1/1:2,14:16:39.12:471,39,0	0/0:24,0:24:69.11:0,69,666	1/1:0,16:16:42.13:507,42,0	1/1:1,17:18:51.16:616,51,0	1/1:1,25:26:66.20:797,66,0	1/1:0,18:18:54.17:652,54,0	1/1:2,10:12:27.08:326,27,0	1/1:2,23:25:69.16:805,69,0	1/1:2,27:29:71.06:933,71,0	0/1:1,10:11:1.90:263,0,2	1/1:3,21:24:63.19:761,63,0	0/0:30,0:30:84.11:0,84,800	0/0:24,0:24:57.08:0,57,550	1/1:2,32:34:93.29:1124,93,0	1/1:3,20:23:60.18:725,60,0	1/1:4,30:34:87.27:1048,87,0	1/1:0,1:1:3.01:36,3,0
chr10	65668150	.	ATG	A	4564.45	PASS	AB=0.852;AC=36;AF=0.667;AN=54;BaseQRankSum=8.219;DP=495;FS=2.256;HRun=0;HaplotypeScore=87.2757;InbreedingCoeff=0.4466;MQ=55.05;MQ0=10;MQRankSum=-0.506;QD=12.82;ReadPosRankSum=2.243;VQSLOD=4.6393;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,1:27:16.49:0,16,683	1/1:4,4:11:23.57:215,24,0	./.	0/0:21,0:4:6.46:0,6,65	0/1:19,3:21:45.27:45,0,231	1/1:6,6:14:23.72:225,24,0	1/1:2,16:19:32.93:360,33,0	0/0:24,0:24:27.02:0,27,349	0/1:10,2:12:39.18:39,0,334	0/1:14,2:14:39.44:39,0,265	0/1:16,1:16:13.54:14,0,259	1/1:6,6:14:17.88:187,18,0	0/0:17,0:17:10.54:0,11,595	1/1:3,12:17:35.77:374,36,0	1/1:4,9:14:26.91:291,27,0	0/0:16,1:19:1.49:0,1,436	1/1:6,11:19:32.76:339,33,0	1/1:3,0:9:11.36:56,11,0	1/1:12,5:17:20.87:210,21,0	1/1:11,8:20:17.88:187,18,0	1/1:3,6:9:14.88:153,15,0	1/1:2,6:10:11.87:118,12,0	0/1:12,2:14:48.20:48,0,209	0/0:11,0:11:27.06:0,27,386	1/1:13,10:25:32.93:357,33,0	0/1:14,13:28:1.71:406,0,2	1/1:13,19:32:50.87:589,51,0	1/1:4,10:12:27.08:312,27,0
chr10	65668209	.	CCTCTCTCTCTCTCTCTCT	C	2747.10	PASS	AB=0.633;AC=22;AF=0.440;AN=50;BaseQRankSum=5.551;DP=444;FS=5.723;HRun=0;HaplotypeScore=231.7489;InbreedingCoeff=0.7157;MQ=59.75;MQ0=17;MQRankSum=-5.610;QD=16.06;ReadPosRankSum=-1.264;VQSLOD=2.0998;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:54.19:0,54,2558	./.	0/0:25,0:17:24.07:0,24,1137	0/0:31,0:19:43.92:0,44,1913	0/0:14,0:14:18.05:0,18,1095	1/1:3,2:6:6.01:183,6,0	1/1:14,5:17:3.01:72,3,0	0/0:32,0:32:62.43:0,62,3306	0/0:7,0:15:26.40:0,26,462	0/0:7,0:17:42.11:0,42,959	0/0:4,0:7:6.91:0,7,177	0/1:3,5:14:2.90:51,0,3	0/0:18,0:18:48.16:0,48,3350	1/1:12,3:18:9.02:115,9,0	0/1:7,2:12:1.22:27,0,1	0/0:7,0:14:12.03:0,12,296	1/1:9,2:13:2.95:20,3,0	0/0:7,0:9:21.07:0,21,553	1/1:9,6:15:18.06:840,18,0	1/1:6,0:8:5.05:48,5,0	./.	1/1:6,1:8:2.90:50,3,0	0/0:13,0:12:18.06:0,18,917	0/0:26,0:25:54.18:0,54,3867	1/1:8,2:9:0.89:2,1,0	1/1:11,3:16:18.06:788,18,0	1/1:14,11:27:16.13:728,16,0	./.
chr10	65668631	.	T	TG	15194.38	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=3.097;DP=528;FS=6.114;HRun=1;HaplotypeScore=69.0791;InbreedingCoeff=0.9956;MQ=95.04;MQ0=0;MQRankSum=-7.378;QD=41.40;ReadPosRankSum=5.309;VQSLOD=5.1435;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,120,1479	1/1:0,5:5:15.05:225,15,0	0/0:28,0:28:80.42:0,80,984	0/0:26,0:25:69.19:0,69,869	0/0:26,0:26:78.24:0,78,997	1/1:0,20:20:60.20:899,60,0	1/1:0,23:23:63.21:944,63,0	1/1:0,24:24:69.21:982,69,0	1/1:0,12:12:33.11:495,33,0	1/1:0,22:22:66.22:988,66,0	1/1:0,16:16:48.16:719,48,0	1/1:0,19:20:57.19:854,57,0	0/0:15,0:15:45.15:0,45,584	1/1:0,20:20:51.13:738,51,0	1/1:1,20:21:57.19:854,57,0	1/1:1,19:20:60.19:879,60,0	1/1:1,21:22:60.20:898,60,0	1/1:0,12:12:33.11:494,33,0	1/1:1,14:15:39.13:583,39,0	1/1:0,11:11:33.11:494,33,0	1/1:0,15:15:36.04:511,36,0	1/1:0,12:12:27.09:405,27,0	0/0:9,0:9:24.08:0,24,312	0/0:14,0:14:42.14:0,42,545	1/1:1,10:11:24.08:359,24,0	1/1:1,30:31:87.29:1302,87,0	1/1:0,27:27:81.27:1213,81,0	1/1:0,8:8:24.08:360,24,0
chr10	65668732	.	AT	A	1796.98	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=8.919;DP=491;FS=0.000;HRun=7;HaplotypeScore=45.4387;InbreedingCoeff=0.9853;MQ=78.55;MQ0=0;MQRankSum=0.002;QD=23.96;ReadPosRankSum=3.122;VQSLOD=3.6476;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,102,1268	0/0:5,0:5:15.05:0,15,188	0/0:13,0:13:26.24:0,26,281	0/0:12,0:12:33.07:0,33,388	0/0:26,0:26:72.21:0,72,881	0/0:11,0:11:33.11:0,33,415	0/0:16,0:16:39.12:0,39,491	0/0:35,0:35:99:0,99,1223	0/0:10,0:10:30.10:0,30,373	1/1:5,21:25:63.14:641,63,0	1/1:2,18:20:54.12:551,54,0	0/0:12,0:12:36.11:0,36,449	0/0:21,0:21:51.16:0,51,708	0/0:15,0:15:45.14:0,45,566	0/0:25,0:25:75.24:0,75,939	1/1:0,16:16:45.10:459,45,0	0/0:17,0:17:51.12:0,51,624	1/1:2,11:13:30.07:306,30,0	0/0:16,0:16:39.09:0,39,464	0/0:33,0:33:90.29:0,90,1131	0/0:4,0:4:12.03:0,12,138	0/0:11,0:11:33.10:0,33,412	0/0:14,0:14:42.13:0,42,528	0/0:15,0:15:45.13:0,45,554	0/0:16,0:16:45.14:0,45,566	0/0:20,1:21:26.57:0,27,648	0/0:24,0:23:69.21:0,69,857	0/0:9,0:9:24.08:0,24,302
chr10	65671280	.	TTGTTGTTGTTGC	T	544.48	PASS	AC=2;AF=0.040;AN=50;BaseQRankSum=0.182;DP=941;FS=0.000;HRun=0;HaplotypeScore=348.3816;InbreedingCoeff=0.7458;MQ=64.50;MQ0=4;MQRankSum=-3.723;QD=18.78;ReadPosRankSum=0.809;VQSLOD=1.3434;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:60.21:0,60,2809	0/0:17,0:17:27.08:0,27,889	./.	./.	0/0:24,0:24:21.07:0,21,826	0/0:20,0:20:21.07:0,21,799	0/0:39,0:39:21.07:0,21,615	./.	1/1:20,9:29:21.07:636,21,0	0/0:38,0:37:30.10:0,30,1254	0/0:14,0:14:12.04:0,12,462	0/0:35,0:35:48.15:0,48,1450	0/0:32,0:32:45.15:0,45,2331	0/0:36,0:36:3.48:0,3,106	0/0:46,0:46:63.20:0,63,2165	0/0:46,0:46:76.61:0,77,2656	0/0:27,0:27:40.38:0,40,1562	0/0:28,0:28:33.07:0,33,982	0/0:29,0:28:6.02:0,6,242	0/0:32,0:31:27.09:0,27,900	0/0:67,0:65:42.14:0,42,1526	0/0:27,0:27:28.34:0,28,1016	0/0:21,0:21:24.07:0,24,773	0/0:45,0:45:78.22:0,78,3452	0/0:17,0:17:18.06:0,18,694	0/0:38,0:38:39.13:0,39,1594	0/0:43,0:43:48.16:0,48,1954	0/0:19,0:19:24.08:0,24,849
chr10	65671307	.	T	TTGTTGTTGCTGC	15859	PASS	AB=1.000;AC=34;AF=0.607;AN=56;BaseQRankSum=0.293;DP=900;FS=1.415;HRun=0;HaplotypeScore=279.4348;InbreedingCoeff=0.6640;MQ=53.65;MQ0=30;MQRankSum=-0.762;QD=24.59;ReadPosRankSum=1.031;VQSLOD=3.0993;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:42:98.93:0,99,1853	1/1:18,0:18:53.54:744,54,0	0/0:14,0:9:7.80:0,8,54	0/0:25,0:18:19.87:0,20,184	0/0:20,0:18:42.02:0,42,544	1/1:25,0:23:47.62:631,48,0	1/1:40,0:40:78.31:939,78,0	0/0:17,0:16:26.99:0,27,237	0/0:23,0:23:47.89:0,48,550	0/1:47,0:34:99:744,0,135	0/1:22,0:12:29.01:186,0,29	1/1:35,0:35:92.79:1151,93,0	0/0:47,0:47:99:0,105,1736	1/1:2,35:40:3.48:166,3,0	1/1:47,0:46:99:1552,116,0	0/1:46,0:46:99:1110,0,208	1/1:33,0:33:14.79:1031,15,0	0/1:28,0:28:66.71:797,0,67	1/1:27,0:17:22.67:340,23,0	1/1:27,0:21:38.87:607,39,0	1/1:68,0:64:99:1464,124,0	1/1:34,0:25:42.45:739,42,0	0/0:17,0:13:33.03:0,33,474	0/0:47,0:47:99:0,108,2042	1/1:21,0:16:33:585,33,0	1/1:33,0:31:63.03:1134,63,0	1/1:39,0:39:77.94:1424,78,0	1/1:15,0:15:31.74:516,32,0
chr10	65671345	.	GGAA	G	1147.75	PASS	AB=0.865;AC=13;AF=0.232;AN=56;BaseQRankSum=7.035;DP=838;FS=8.316;HRun=0;HaplotypeScore=165.3084;InbreedingCoeff=-0.2930;MQ=73.35;MQ0=1;MQRankSum=-10.328;QD=3.25;ReadPosRankSum=-5.139;VQSLOD=-0.0276;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:40,1:41:99:0,120,2891	0/1:16,0:16:0.70:1,0,1043	0/0:38,0:33:96.31:0,96,2163	0/0:37,0:32:90.31:0,90,2142	0/0:22,0:22:66.21:0,66,1552	0/1:20,2:22:54.42:54,0,1319	0/0:37,3:40:60.66:0,61,2569	0/0:40,0:40:99:0,115,2591	0/0:25,0:25:63.22:0,63,1424	0/1:32,4:36:75.11:75,0,2193	0/1:9,3:12:99:122,0,558	0/1:21,3:24:80.20:80,0,1467	0/0:50,0:50:99:0,150,3629	0/0:31,0:31:39.13:0,39,955	0/1:29,9:38:99:133,0,2030	0/1:29,14:43:99:339,0,2022	0/1:27,5:32:46.39:46,0,1905	0/1:26,3:29:52.22:52,0,1548	0/0:22,0:22:66.23:0,66,1626	0/0:15,1:15:21.15:0,21,939	0/0:43,8:50:7.81:0,8,2867	0/0:23,0:23:41.23:0,41,1527	0/0:17,0:17:51.18:0,51,1237	0/0:32,0:32:96.33:0,96,2358	0/1:15,4:19:99:103,0,1012	0/1:22,6:28:99:205,0,1536	0/1:39,7:46:54.31:54,0,2721	0/1:7,1:8:32.20:32,0,423
chr10	65672144	.	CAGGTTCTTTAGCCCAA	C	3186.63	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=8.229;DP=474;FS=6.434;HRun=0;HaplotypeScore=199.4275;InbreedingCoeff=0.9812;MQ=94.66;MQ0=0;MQRankSum=-8.447;QD=66.39;ReadPosRankSum=2.271;VQSLOD=2.9593;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,111,8233	0/0:6,0:6:18.06:0,18,1352	0/0:19,0:19:51.17:0,51,3150	0/0:25,0:25:65.89:0,66,3286	0/0:16,0:16:45.15:0,45,2819	0/0:21,0:21:63.22:0,63,4627	0/0:15,0:15:45.15:0,45,3369	0/0:30,0:30:81.26:0,81,5065	0/0:16,0:16:45.15:0,45,2992	1/1:1,9:10:24.08:1031,24,0	1/1:1,9:10:12.04:401,12,0	0/0:11,0:11:30.09:0,30,1680	0/0:11,0:11:33.11:0,33,2419	0/0:23,0:23:66.23:0,66,4463	0/0:16,0:16:45.15:0,45,2646	1/1:3,13:16:27.09:1206,27,0	0/0:27,0:27:81.28:0,81,5845	1/1:1,11:12:15.05:704,15,0	0/0:20,0:20:60.21:0,60,3876	0/0:15,0:15:45.14:0,45,2867	0/0:30,0:30:87.26:0,87,5488	0/0:6,0:6:18.06:0,18,1224	0/0:13,0:13:39.12:0,39,2082	0/0:13,0:13:39.13:0,39,3038	0/0:16,0:16:48.16:0,48,3069	0/0:11,0:11:33.11:0,33,2389	0/0:16,0:16:48.16:0,48,3492	0/0:12,0:12:36.08:0,36,2600
chr10	65674126	.	TAATGTCGGAAGGAAC	T	2342.43	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=7.068;DP=465;FS=11.595;HRun=0;HaplotypeScore=190.2399;InbreedingCoeff=0.9556;MQ=86.20;MQ0=0;MQRankSum=-6.680;QD=75.56;ReadPosRankSum=0.338;VQSLOD=2.7370;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:66.23:0,66,4653	0/0:7,0:7:18.06:0,18,1062	0/0:20,0:20:60.20:0,60,3646	0/0:16,0:15:41.98:0,42,2342	0/0:22,0:22:66.21:0,66,4534	0/0:15,0:15:45.15:0,45,2953	0/0:21,0:21:54.14:0,54,3122	0/0:26,0:26:78.27:0,78,5626	0/0:12,0:12:36.12:0,36,2662	1/1:4,7:11:21.07:856,21,0	1/1:5,11:16:33.11:1350,33,0	0/0:16,0:16:48.16:0,48,3083	0/0:11,0:11:33.11:0,33,2312	0/0:16,0:16:33.09:0,33,1761	0/0:15,0:15:39.13:0,39,2706	1/1:2,2:4:6.02:270,6,0	0/0:18,0:18:51.18:0,51,3503	0/0:12,0:12:36.12:0,36,2538	0/0:25,0:25:75.26:0,75,5019	0/0:19,0:19:54.19:0,54,3669	0/0:10,0:10:27.09:0,27,1735	0/0:23,0:23:60.68:0,61,4283	0/0:19,0:19:57.20:0,57,4127	0/0:14,0:14:39.13:0,39,2749	0/0:19,0:19:57.17:0,57,3765	0/0:25,0:25:72.23:0,72,4650	0/0:17,0:17:48.15:0,48,3166	0/0:9,0:9:24.08:0,24,1800
chr10	65674181	.	TGGTTC	T	55.76	PASS	AB=0.957;AC=7;AF=0.130;AN=54;BaseQRankSum=0.744;DP=529;FS=27.807;HRun=0;HaplotypeScore=99.2656;InbreedingCoeff=0.0485;MQ=43.72;MQ0=38;MQRankSum=-1.426;QD=0.51;ReadPosRankSum=-3.908;VQSLOD=-0.7434;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:38:22:0,22,1193	0/0:8,0:8:15.53:0,16,351	1/1:7,0:2:2.68:11,3,0	./.	0/1:21,0:20:29.71:30,0,387	0/0:14,0:14:33.10:0,33,641	0/0:16,0:16:39.09:0,39,666	0/0:25,0:22:16.90:0,17,950	0/0:14,0:13:27.62:0,28,521	0/1:19,0:16:14.59:15,0,610	0/1:22,2:25:18.84:19,0,747	0/0:8,1:9:7.06:0,7,165	0/0:15,0:12:18.41:0,18,414	0/0:23,0:21:41.69:0,42,788	0/0:17,0:17:11.08:0,11,532	0/0:14,0:14:37.10:0,37,758	0/0:27,0:25:35.19:0,35,1014	0/1:14,0:11:50.21:50,0,370	0/0:21,0:19:57.05:0,57,1121	0/0:22,4:24:31.64:0,32,1091	0/0:12,0:10:24.05:0,24,403	0/0:18,0:19:5.30:0,5,515	0/0:15,0:14:38.55:0,39,634	0/1:21,0:21:53.46:53,0,481	0/0:29,0:29:73.13:0,73,1160	0/0:19,0:15:12.89:0,13,781	0/0:31,0:27:50.82:0,51,1262	0/0:18,0:13:35.71:0,36,571
chr10	65675618	.	GA	G	1324.03	PASS	AB=0.725;AC=27;AF=0.482;AN=56;BaseQRankSum=-0.487;DP=471;FS=17.382;HRun=16;HaplotypeScore=65.4021;InbreedingCoeff=0.2065;MQ=60.80;MQ0=10;MQRankSum=1.399;QD=4.30;ReadPosRankSum=3.914;VQSLOD=0.0474;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:22.54:0,23,160	0/1:4,3:6:30.03:39,0,30	0/0:20,1:7:8.21:0,8,64	0/1:9,0:5:3.25:3,0,16	0/0:26,1:28:15.45:0,15,283	1/1:11,7:18:6.16:142,6,0	0/1:11,5:17:16.17:120,0,16	0/1:22,5:27:3.14:3,0,271	0/0:18,0:19:41.72:0,42,327	0/0:19,1:20:23.47:0,23,267	0/0:13,0:15:21.22:0,21,251	1/1:3,7:11:8.95:57,9,0	0/0:15,0:13:8.86:0,9,173	1/1:6,4:11:21.86:111,22,0	1/1:5,12:16:17.35:108,17,0	0/0:8,1:11:5.30:0,5,135	1/1:5,19:29:1.43:196,1,0	0/1:3,12:15:9.26:129,0,9	1/1:7,12:20:32.13:173,32,0	0/1:3,8:10:8.08:57,0,8	1/1:3,3:5:4.73:45,5,0	0/1:5,2:7:16.54:27,0,17	0/0:12,0:13:20.02:0,20,173	0/1:16,0:17:3.08:3,0,169	0/1:9,9:18:24.18:24,0,24	1/1:12,16:30:15.82:205,16,0	0/1:3,10:15:14.83:15,0,39	0/1:8,10:18:6.31:47,0,6
chr10	65676875	.	A	AT	322.77	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=-4.175;DP=608;FS=20.291;HRun=13;HaplotypeScore=72.2716;InbreedingCoeff=0.5330;MQ=76.83;MQ0=1;MQRankSum=-0.885;QD=6.46;ReadPosRankSum=0.440;VQSLOD=0.6283;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:17:42.70:0,43,277	0/0:9,0:9:23.75:0,24,163	0/0:21,0:14:6.80:0,7,44	0/1:23,0:17:17.55:18,0,38	0/0:33,2:35:55.35:0,55,525	0/0:16,0:16:38.68:0,39,267	0/0:15,1:16:13.80:0,14,238	0/0:34,0:37:72.41:0,72,483	0/0:20,0:20:41.57:0,42,285	0/0:29,3:32:9.66:0,10,353	0/0:21,1:23:24.71:0,25,304	0/0:20,1:23:24.21:0,24,294	0/0:20,1:23:23.82:0,24,291	0/0:13,0:13:29.73:0,30,206	0/0:28,1:30:48.54:0,49,471	0/0:14,1:15:10.83:0,11,219	0/0:33,1:35:63.44:0,63,571	0/0:13,0:13:29.60:0,30,195	0/0:22,1:23:10.23:0,10,234	0/0:30,2:32:34.52:0,35,382	0/0:9,0:9:23.80:0,24,164	0/0:21,2:23:19.69:0,20,276	0/0:17,0:17:30.46:0,30,221	0/0:11,0:11:23.72:0,24,160	1/1:8,19:27:45.48:410,45,0	0/0:24,0:24:38.56:0,39,267	0/0:34,0:34:80.27:0,80,553	0/0:6,0:6:11.90:0,12,82
chr10	65677718	.	CGTGTGTGT	C	15076.11	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=6.917;DP=781;FS=1.631;HRun=0;HaplotypeScore=208.5469;InbreedingCoeff=0.9601;MQ=57.11;MQ0=11;MQRankSum=-13.720;QD=37.88;ReadPosRankSum=4.477;VQSLOD=4.5297;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:57.17:0,57,2050	1/1:4,10:13:21.07:544,21,0	0/0:42,0:25:30.10:0,30,971	0/0:31,0:17:24.05:0,24,540	0/0:20,0:21:54.17:0,54,1731	1/1:7,25:33:54.19:1362,54,0	1/1:10,13:24:27.09:677,27,0	0/0:33,0:43:54.19:0,54,1204	0/0:7,0:25:48.15:0,48,1034	0/0:27,0:26:53.92:0,54,1624	0/0:12,0:22:3.01:0,3,105	1/1:7,17:24:54.18:1398,54,0	0/0:34,0:37:74.75:0,75,2835	1/1:8,18:27:42.14:1051,42,0	1/1:10,20:31:51.17:1244,51,0	0/0:23,0:43:39.61:0,40,1214	1/1:10,5:15:9.03:220,9,0	0/0:6,0:11:11.99:0,12,344	1/1:6,9:13:27.09:659,27,0	1/1:9,21:31:51.17:1199,51,0	1/1:10,14:23:14.98:296,15,0	1/1:6,16:23:45.15:1112,45,0	0/0:24,0:26:69.24:0,69,2622	0/0:21,0:22:48.15:0,48,1776	1/1:17,23:40:45.15:1099,45,0	1/1:8,26:34:42.27:1576,42,0	1/1:15,33:47:77.88:2019,78,0	1/1:3,11:14:24.08:621,24,0
chr10	65679347	.	GTTC	G	1115.08	PASS	AB=0.980;AC=24;AF=0.429;AN=56;BaseQRankSum=10.167;DP=465;FS=2.956;HRun=0;HaplotypeScore=86.6268;InbreedingCoeff=-0.0223;MQ=66.22;MQ0=4;MQRankSum=-0.832;QD=3.60;ReadPosRankSum=7.616;VQSLOD=0.8201;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:44.58:0,45,557	1/1:6,0:6:15.57:76,16,0	0/0:28,0:8:7.09:0,7,102	0/0:16,0:11:8.13:0,8,135	0/0:23,0:23:61.87:0,62,869	1/1:12,0:12:17.14:71,17,0	0/1:19,0:19:10.17:107,0,10	0/0:29,0:29:52.26:0,52,515	0/0:5,0:5:10.68:0,11,54	0/1:21,1:23:25.12:25,0,252	0/1:16,0:16:29.17:36,0,29	0/1:7,0:7:10.75:24,0,11	0/0:10,0:10:23.71:0,24,318	0/1:9,0:9:7.91:60,0,8	1/1:17,0:17:26.40:133,26,0	1/1:12,0:12:25.64:121,26,0	0/1:32,0:32:86.68:133,0,87	0/1:7,1:7:11.79:15,0,12	0/1:20,0:20:52.85:59,0,53	0/1:17,1:18:40.55:41,0,91	0/1:10,0:10:4.01:4,0,88	1/1:12,1:13:4.12:106,4,0	0/0:17,0:17:35.55:0,36,449	0/0:6,0:6:17.26:0,17,121	0/1:19,0:19:79.14:79,0,103	0/1:22,0:23:51.82:52,0,94	0/1:29,0:29:44.91:132,0,45	0/1:17,0:17:21.05:21,0,134
chr10	65679350	.	CTTT	C	5249.30	PASS	AB=0.714;AC=36;AF=0.643;AN=56;BaseQRankSum=-3.797;DP=475;FS=0.000;HRun=16;HaplotypeScore=73.2555;InbreedingCoeff=0.8104;MQ=66.49;MQ0=5;MQRankSum=-1.089;QD=16.88;ReadPosRankSum=6.148;VQSLOD=3.5833;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:22:37.23:0,37,475	1/1:0,6:6:18.05:194,18,0	0/0:30,0:9:7.91:0,8,75	0/0:20,0:12:19.89:0,20,202	0/0:19,0:22:54.07:0,54,761	1/1:0,9:10:23.92:244,24,0	1/1:3,15:18:16.78:307,17,0	0/0:10,1:26:12.05:0,12,266	0/0:3,0:9:3.74:0,4,8	1/1:15,7:23:17.86:208,18,0	1/1:1,12:17:34.33:341,34,0	1/1:1,6:7:5.94:64,6,0	0/0:6,0:11:22.27:0,22,290	1/1:2,7:9:14.96:161,15,0	1/1:2,16:19:22.54:429,23,0	1/1:0,12:12:30.07:319,30,0	1/1:11,18:34:44.15:522,44,0	1/1:4,4:8:8.92:82,9,0	1/1:4,13:18:40.10:399,40,0	0/1:9,7:16:0.67:155,0,1	0/1:7,4:11:3.13:85,0,3	1/1:2,10:12:29.99:323,30,0	0/0:9,0:16:34.22:0,34,401	0/0:3,0:6:5.48:0,5,28	1/1:8,10:20:16.20:289,16,0	1/1:8,14:24:20.78:408,21,0	1/1:7,18:28:33.84:497,34,0	1/1:8,9:18:22.11:223,22,0
chr10	65679620	.	CT	C	7431.41	PASS	AB=0.889;AC=43;AF=0.768;AN=56;BaseQRankSum=7.177;DP=439;FS=0.903;HRun=9;HaplotypeScore=54.1898;InbreedingCoeff=0.8815;MQ=64.77;MQ0=0;MQRankSum=-2.057;QD=21.73;ReadPosRankSum=0.637;VQSLOD=5.4256;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:60.15:0,60,674	1/1:0,8:8:24.01:220,24,0	0/0:4,1:5:6.01:0,6,61	0/0:4,0:4:11.95:0,12,108	0/0:29,0:29:84.22:0,84,948	1/1:1,19:20:16.41:404,16,0	1/1:3,9:12:24.01:220,24,0	1/1:2,25:27:40.42:624,40,0	1/1:1,11:12:27.01:247,27,0	1/1:0,19:21:61.09:529,61,0	1/1:3,15:18:45:408,45,0	1/1:0,18:18:51.03:467,51,0	0/0:20,0:20:57.14:0,57,634	1/1:1,12:13:30.02:275,30,0	1/1:2,14:16:42.02:384,42,0	1/1:3,11:14:27.01:247,27,0	1/1:4,12:16:36.01:327,36,0	1/1:1,4:5:12.01:110,12,0	1/1:5,14:19:38.98:350,39,0	1/1:5,13:18:39.72:372,40,0	1/1:0,9:9:24.01:220,24,0	1/1:2,13:15:39.02:357,39,0	0/0:17,0:17:20.70:0,21,492	0/1:7,1:8:6.37:6,0,187	1/1:3,14:17:42.02:384,42,0	1/1:3,17:20:54.03:494,54,0	1/1:3,22:25:63.03:576,63,0	1/1:3,8:11:23.95:210,24,0
chr10	65679663	.	G	GT	1684.18	PASS	AB=0.913;AC=31;AF=0.554;AN=56;BaseQRankSum=-0.282;DP=512;FS=0.503;HRun=17;HaplotypeScore=97.6215;InbreedingCoeff=0.0875;MQ=67.15;MQ0=1;MQRankSum=-2.344;QD=4.35;ReadPosRankSum=-3.376;VQSLOD=0.1862;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:20,1:25:12.15:12,0,93	1/1:5,1:6:2.99:23,3,0	0/0:15,0:9:4.32:0,4,14	0/1:17,0:13:11.95:16,0,12	0/1:26,7:33:28.64:29,0,105	1/1:16,2:20:8.92:124,9,0	0/1:9,1:10:0.81:62,0,1	0/0:22,0:29:15.85:0,16,53	1/1:13,0:13:2.33:91,2,0	0/0:13,0:18:9.54:0,10,28	0/0:13,0:21:2.10:0,2,50	1/1:16,3:21:8.84:119,9,0	0/1:17,2:20:17.80:18,0,85	1/1:13,1:14:16.35:96,16,0	1/1:11,3:14:2.84:97,3,0	0/0:9,0:15:21.41:0,21,75	0/1:15,3:18:12.27:72,0,12	0/0:3,0:7:10.55:0,11,28	0/1:10,0:10:19.19:25,0,19	1/1:11,9:22:18.80:211,19,0	0/1:9,1:10:19.14:29,0,19	0/1:11,0:12:10.47:70,0,10	0/0:15,2:19:6.06:0,6,102	0/1:10,1:12:32.34:47,0,32	1/1:20,6:26:12.07:157,12,0	1/1:18,4:22:17.54:111,18,0	0/1:32,5:37:8.71:229,0,9	1/1:12,7:22:13.04:219,13,0
chr10	65684074	.	TG	T	618.31	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.875;DP=626;FS=1.885;HRun=2;HaplotypeScore=70.8271;InbreedingCoeff=0.9808;MQ=78.84;MQ0=0;MQRankSum=1.054;QD=28.10;ReadPosRankSum=0.325;VQSLOD=3.2263;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,111,1760	0/0:12,0:12:33.11:0,33,527	0/0:18,0:18:39.07:0,39,653	0/0:14,0:14:15.21:0,15,529	0/0:32,0:32:96.31:0,96,1505	0/0:19,0:19:57.18:0,57,887	0/0:15,0:15:45.15:0,45,708	0/0:28,1:29:84.29:0,84,1343	1/1:0,22:22:51.17:713,51,0	0/0:33,0:33:99:0,99,1561	0/0:30,0:30:90.29:0,90,1413	0/0:23,0:23:69.24:0,69,1103	0/0:28,0:28:84.27:0,84,1311	0/0:17,0:17:51.13:0,51,774	0/0:24,0:24:72.25:0,72,1145	0/0:21,1:22:24.26:0,24,958	0/0:22,0:22:63.21:0,63,1004	0/0:26,0:26:78.27:0,78,1246	0/0:19,0:19:57.19:0,57,911	0/0:36,0:36:99:0,105,1632	0/0:20,0:20:60.19:0,60,933	0/0:19,0:19:57.18:0,57,886	0/0:18,0:18:54.17:0,54,839	0/0:16,0:16:48.16:0,48,763	0/0:15,0:15:45.15:0,45,719	0/0:28,0:28:84.28:0,84,1322	0/0:23,0:23:69.24:0,69,1103	0/0:8,0:8:24.08:0,24,383
chr10	65684395	.	TA	T	2765.72	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=10.933;DP=601;FS=0.883;HRun=5;HaplotypeScore=55.6328;InbreedingCoeff=0.9987;MQ=74.02;MQ0=0;MQRankSum=-1.868;QD=29.11;ReadPosRankSum=1.715;VQSLOD=4.0790;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:75.25:0,75,1025	0/0:7,0:7:21.07:0,21,287	0/0:12,0:12:33.07:0,33,422	0/0:11,0:11:31.34:0,31,399	0/0:31,0:31:90.24:0,90,1152	0/0:23,0:23:63.20:0,63,847	0/0:14,0:14:42.13:0,42,559	0/0:22,0:22:54.17:0,54,724	0/0:23,0:23:66.21:0,66,886	1/1:3,26:29:78.22:885,78,0	1/1:1,31:32:84.24:953,84,0	0/0:18,0:18:54.18:0,54,737	0/0:21,0:21:60.20:0,60,820	0/0:18,0:18:54.18:0,54,739	0/0:27,0:27:75.25:0,75,1025	1/1:0,17:17:48.14:544,48,0	0/0:22,0:22:63.18:0,63,842	1/1:1,16:17:48.14:544,48,0	0/0:25,0:25:69.22:0,69,929	0/0:27,0:27:81.27:0,81,1107	0/0:19,0:19:57.16:0,57,747	0/0:19,0:19:54.17:0,54,722	0/0:22,0:22:66.22:0,66,902	0/0:17,0:17:48.15:0,48,641	0/0:23,0:23:69.22:0,69,928	0/0:26,0:26:78.26:0,78,1066	0/0:34,0:34:99:0,99,1334	0/0:18,0:18:53.39:0,53,704
chr10	65684624	.	GT	G	2372.18	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=11.607;DP=520;FS=0.433;HRun=7;HaplotypeScore=49.3823;InbreedingCoeff=0.9476;MQ=71.52;MQ0=0;MQRankSum=-1.391;QD=25.78;ReadPosRankSum=2.865;VQSLOD=4.1366;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:57.17:0,57,703	0/0:4,0:4:9.03:0,9,113	0/0:15,0:15:39.12:0,39,483	0/0:8,0:8:18.02:0,18,199	0/0:28,0:28:75.23:0,75,931	0/0:13,0:13:36.12:0,36,453	0/0:14,0:14:39.12:0,39,491	0/0:29,0:29:72.22:0,72,893	0/0:17,0:17:45.14:0,45,566	1/1:2,22:24:66.13:665,66,0	1/1:0,31:31:87.19:888,87,0	0/0:17,0:17:51.15:0,51,627	0/0:17,0:17:51.16:0,51,642	0/0:25,0:25:75.22:0,75,918	0/0:22,0:22:63.19:0,63,780	1/1:2,16:18:42.09:428,42,0	0/0:31,0:31:87.24:0,87,1077	1/1:1,18:19:54.12:551,54,0	0/0:11,0:11:27.09:0,27,340	0/0:24,0:24:72.22:0,72,895	0/0:11,0:11:30.08:0,30,364	0/0:13,0:13:39.12:0,39,491	0/0:21,0:21:63.19:0,63,781	0/0:11,0:11:27.09:0,27,340	0/0:20,0:20:54.17:0,54,669	0/0:21,2:23:4.98:0,5,694	0/0:18,0:18:48.12:0,48,576	0/0:17,0:17:45.14:0,45,566
chr10	65684697	.	GT	G	1471.96	PASS	AB=0.815;AC=9;AF=0.161;AN=56;BaseQRankSum=9.084;DP=504;FS=0.920;HRun=11;HaplotypeScore=53.7426;InbreedingCoeff=0.5208;MQ=66.37;MQ0=1;MQRankSum=-2.614;QD=12.58;ReadPosRankSum=0.444;VQSLOD=3.2283;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,1:27:40.68:0,41,672	0/0:5,0:5:15.04:0,15,160	0/1:21,2:17:20.93:21,0,142	0/0:11,0:7:8.68:0,9,66	0/0:28,3:31:7.26:0,7,685	0/1:10,2:12:13.07:13,0,278	0/0:11,1:12:11.39:0,11,298	0/0:29,0:29:72.16:0,72,750	0/0:12,0:12:35.30:0,35,358	1/1:3,16:19:47.94:394,48,0	1/1:5,21:26:71.90:588,72,0	0/0:12,1:13:11.26:0,11,302	0/0:13,1:14:11.72:0,12,321	0/0:23,2:25:16.81:0,17,561	0/0:13,0:13:33.07:0,33,345	0/1:6,6:12:29.89:145,0,30	0/0:26,0:26:35.52:0,36,580	1/1:8,17:25:56.92:468,57,0	0/0:10,1:11:2.42:0,2,231	0/0:17,1:18:29.48:0,29,513	0/0:6,0:6:18.05:0,18,192	0/0:10,0:10:30.04:0,30,308	0/0:16,1:17:14.44:0,14,345	0/0:6,0:7:17.88:0,18,174	0/0:20,1:21:26.49:0,26,487	0/0:27,0:28:66:0,66,685	0/0:26,0:27:75:0,75,771	0/0:23,0:24:57.83:0,58,575
chr10	65685110	.	CTATTTATTTATT	C	4831.18	PASS	AB=0.947;AC=25;AF=0.543;AN=46;BaseQRankSum=5.143;DP=253;FS=4.086;HRun=0;HaplotypeScore=90.7536;InbreedingCoeff=0.6234;MQ=70.10;MQ0=1;MQRankSum=-6.258;QD=33.09;ReadPosRankSum=5.312;VQSLOD=3.6542;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:30.10:0,30,1448	1/1:2,1:3:3.01:104,3,0	0/0:9,0:7:2.04:0,2,6	0/0:6,0:5:0.89:0,1,2	0/0:13,0:13:12.04:0,12,658	1/1:12,8:20:21.07:697,21,0	./.	0/0:40,0:39:33.11:0,33,1278	1/1:1,0:3:2.03:5,2,0	0/0:4,0:5:3.01:0,3,77	0/0:2,0:5:9.03:0,9,231	1/1:1,4:5:12.04:414,12,0	0/0:4,0:4:9.03:0,9,515	./.	1/1:1,3:4:9.03:311,9,0	0/0:3,0:4:3.01:0,3,77	1/1:8,7:15:15.05:518,15,0	0/1:17,1:18:99:111,0,101	1/1:11,7:18:21.01:498,21,0	1/1:5,1:6:3.01:104,3,0	./.	./.	./.	0/0:2,0:2:3.01:0,3,176	1/1:2,7:8:15.05:480,15,0	1/1:4,5:9:15.05:465,15,0	1/1:8,7:15:21.07:663,21,0	1/1:14,7:21:15.05:461,15,0
chr10	65685357	.	GGT	G	1576.79	PASS	AB=1.000;AC=30;AF=0.625;AN=48;BaseQRankSum=1.447;DP=475;FS=0.724;HRun=0;HaplotypeScore=80.8691;InbreedingCoeff=0.5586;MQ=58.22;MQ0=7;MQRankSum=-0.797;QD=5.53;ReadPosRankSum=1.021;VQSLOD=2.4307;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:42:0,42,578	1/1:3,0:2:0.89:2,1,0	0/0:24,0:12:3.01:0,3,34	./.	0/0:10,0:10:15.05:0,15,206	1/1:13,0:13:8.81:65,9,0	1/1:27,0:26:37.60:335,38,0	0/0:29,0:29:9.61:0,10,55	./.	0/0:12,0:12:2.96:0,3,20	./.	1/1:25,1:25:22.70:166,23,0	0/0:10,0:10:9.03:0,9,132	1/1:13,0:13:11.11:84,11,0	1/1:5,1:6:9.02:100,9,0	1/1:13,0:13:2.84:14,3,0	1/1:25,0:25:20.82:161,21,0	0/0:17,0:17:6.35:0,6,31	0/1:14,0:14:19.28:25,0,19	1/1:7,1:9:11.96:108,12,0	1/1:51,1:48:31.10:243,31,0	0/0:9,0:9:0:0,0,0	./.	0/1:31,0:30:10.36:10,0,611	1/1:9,0:9:3.25:17,3,0	1/1:12,1:13:9.77:160,10,0	1/1:12,1:13:24.09:189,24,0	1/1:17,0:17:6.01:59,6,0
chr10	65685364	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTT	G	613.81	PASS	AC=8;AF=0.167;AN=48;BaseQRankSum=2.091;DP=543;FS=18.475;HRun=0;HaplotypeScore=322.8719;InbreedingCoeff=0.6335;MQ=51.74;MQ0=16;MQRankSum=-0.440;QD=11.58;ReadPosRankSum=1.599;VQSLOD=1.1346;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:45:92.05:0,92,7358	0/0:6,0:5:3.48:0,3,93	./.	./.	0/0:11,0:11:18.53:0,19,1841	0/0:17,0:17:14.70:0,15,119	0/0:34,0:32:43.38:0,43,1289	0/0:28,0:28:38.34:0,38,748	1/1:9,0:9:3.01:49,3,0	1/1:13,0:13:0.17:110,0,0	./.	0/0:28,0:27:21.48:0,21,770	0/0:12,0:11:16.30:0,16,1110	0/0:14,0:13:12.04:0,12,303	0/0:8,0:8:9.03:0,9,441	1/1:2,11:13:2.53:229,3,0	0/0:27,0:27:29.41:0,29,1426	1/1:18,0:18:11.94:346,12,0	0/0:15,0:14:15.52:0,16,729	0/0:12,0:11:11.63:0,12,348	0/0:70,0:65:47.47:0,47,1317	0/0:9,0:9:0.47:0,0,1	./.	0/0:37,0:35:78.71:0,79,5553	0/0:14,0:11:6.47:0,6,159	0/0:16,0:16:24.79:0,25,1740	0/0:15,0:14:21.53:0,22,596	0/0:15,0:15:6.01:0,6,148
chr10	65685366	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTT	G	650.01	PASS	AB=1.000;AC=9;AF=0.188;AN=48;BaseQRankSum=2.067;DP=548;FS=17.921;HRun=0;HaplotypeScore=304.5923;InbreedingCoeff=0.6029;MQ=51.35;MQ0=16;MQRankSum=-1.100;QD=9.70;ReadPosRankSum=1.442;VQSLOD=0.7385;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:47:92.34:0,92,6963	0/0:6,0:5:3.48:0,3,90	./.	./.	0/0:11,0:11:18.95:0,19,1683	0/0:17,0:17:12.22:0,12,71	0/0:35,0:33:45.07:0,45,1213	0/0:29,0:29:13.05:0,13,705	1/1:8,0:8:3.01:94,3,0	1/1:6,7:13:9.03:240,9,0	./.	0/0:30,0:29:23.63:0,24,697	0/0:13,0:12:15.94:0,16,967	0/0:14,0:13:12.04:0,12,238	0/0:8,0:8:9.03:0,9,379	1/1:13,0:13:2.77:196,3,0	0/0:25,0:25:24.38:0,24,1263	1/1:18,0:18:9.03:244,9,0	0/0:14,0:13:15.05:0,15,613	0/0:12,0:11:8.64:0,9,264	0/0:71,0:66:46.95:0,47,1127	0/0:10,0:10:0.47:0,0,1	./.	0/0:38,0:36:78.72:0,79,5318	0/0:14,0:11:4.73:0,5,103	0/0:16,0:16:24.75:0,25,1600	0/1:15,0:14:0.83:1,0,445	0/0:15,0:15:3.48:0,3,122
chr10	65685394	.	TTG	T	933.87	PASS	AB=0.833;AC=30;AF=0.652;AN=46;BaseQRankSum=6.955;DP=483;FS=0.000;HRun=0;HaplotypeScore=103.9777;InbreedingCoeff=0.5032;MQ=49.65;MQ0=20;MQRankSum=0.474;QD=2.81;ReadPosRankSum=-2.374;VQSLOD=1.6078;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:41:3.52:0,4,679	./.	./.	./.	0/0:15,0:15:27.09:0,27,400	1/1:7,10:17:5.97:69,6,0	1/1:18,21:37:5.71:55,6,0	0/0:26,0:26:27:0,27,347	1/1:11,0:11:1.94:6,2,0	./.	./.	1/1:17,7:21:5.16:43,5,0	0/0:12,0:11:15.18:0,15,161	1/1:7,9:15:2.85:34,3,0	1/1:4,5:8:6:58,6,0	1/1:11,0:11:2.84:14,3,0	1/1:23,0:23:26.52:264,27,0	0/0:14,0:14:0.47:0,0,1	1/1:9,4:11:11.11:88,11,0	1/1:5,2:6:3.45:22,3,0	1/1:36,30:60:2.10:34,2,0	0/0:8,0:7:0:0,0,0	0/0:5,1:6:6.01:0,6,70	0/1:44,0:42:9.33:9,0,586	0/1:6,6:9:0.13:0,0,0	1/1:11,6:17:12.32:164,12,0	1/1:11,6:16:8.98:88,9,0	1/1:6,0:6:12.03:129,12,0
chr10	65685885	.	C	CT	8487.66	PASS	AB=0.567;AC=28;AF=0.500;AN=56;BaseQRankSum=-13.643;DP=732;FS=10.602;HRun=10;HaplotypeScore=71.2520;InbreedingCoeff=0.8340;MQ=68.10;MQ0=0;MQRankSum=1.175;QD=21.38;ReadPosRankSum=2.811;VQSLOD=5.4518;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:68.88:0,69,564	1/1:4,6:10:18.05:192,18,0	0/0:15,0:15:1.95:0,2,113	0/0:14,0:12:10.19:0,10,124	0/0:28,0:29:74.79:0,75,594	1/1:1,20:21:54.14:576,54,0	1/1:6,12:18:30.08:320,30,0	0/0:32,0:32:62.37:0,62,499	0/0:27,0:28:76.32:0,76,605	0/0:23,0:24:52.92:0,53,419	0/0:31,0:31:74.88:0,75,615	1/1:3,22:25:54.14:575,54,0	0/0:31,0:32:79.92:0,80,646	1/1:4,30:34:78.16:814,78,0	1/1:5,26:31:53.89:575,54,0	0/0:25,0:26:73.94:0,74,597	1/1:3,24:28:50.29:570,50,0	0/0:21,0:21:37.26:0,37,395	1/1:8,22:31:20.60:604,21,0	1/1:7,43:50:99:1276,123,0	0/1:3,12:15:7.22:330,0,7	1/1:2,18:20:54.14:576,54,0	0/0:38,0:38:58.12:0,58,678	0/0:14,0:14:26.96:0,27,222	1/1:4,26:31:62.99:654,63,0	1/1:10,22:32:22.42:619,22,0	0/1:9,22:33:4.78:544,0,5	1/1:8,10:18:5.45:263,5,0
chr10	65688840	.	TTG	T	1053.53	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.912;DP=668;FS=4.988;HRun=0;HaplotypeScore=76.1375;InbreedingCoeff=0.9995;MQ=81.32;MQ0=0;MQRankSum=-3.433;QD=39.02;ReadPosRankSum=2.994;VQSLOD=5.7162;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:72.22:0,72,1303	0/0:16,0:16:48.16:0,48,889	0/0:18,0:18:54.15:0,54,976	0/0:19,0:17:44.86:0,45,764	0/0:33,0:33:99:0,99,1807	0/0:24,0:24:66.23:0,66,1236	0/0:25,0:25:75.26:0,75,1404	0/0:34,0:34:99:0,99,1851	1/1:0,27:27:78.26:1148,78,0	0/0:24,0:24:69.24:0,69,1293	0/0:25,0:25:72.22:0,72,1286	0/0:28,0:28:84.29:0,84,1573	0/0:23,0:23:63.22:0,63,1179	0/0:19,0:19:54.19:0,54,1003	0/0:27,0:27:81.26:0,81,1485	0/0:18,0:18:54.19:0,54,1011	0/0:35,0:34:99:0,105,1912	0/0:17,0:17:51.17:0,51,954	0/0:20,0:20:60.21:0,60,1114	0/0:43,0:43:99:0,126,2288	0/0:12,0:12:36.11:0,36,641	0/0:25,0:25:72.23:0,72,1310	0/0:29,0:29:81.28:0,81,1515	0/0:14,0:14:42.14:0,42,775	0/0:24,0:24:69.24:0,69,1292	0/0:19,0:19:51.17:0,51,950	0/0:34,0:34:99:0,102,1859	0/0:11,0:11:33.11:0,33,606
chr10	65690694	.	GGAGAGAGAGAGAGAGAGAGAGAGAGA	G	4592.67	PASS	AB=1.000;AC=31;AF=0.554;AN=56;BaseQRankSum=2.770;DP=432;FS=10.804;HRun=0;HaplotypeScore=175.8631;InbreedingCoeff=0.6286;MQ=55.88;MQ0=25;MQRankSum=-3.755;QD=20.32;ReadPosRankSum=1.861;VQSLOD=3.1569;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:17:13.77:0,14,947	1/1:0,8:8:6.02:407,6,0	1/1:47,0:14:1.88:10,2,0	0/0:71,0:17:3.48:0,3,90	0/0:20,0:20:39.12:0,39,2533	1/1:8,0:7:15.02:299,15,0	1/1:11,0:10:8.98:165,9,0	0/0:20,0:20:36.99:0,37,1260	0/0:5,0:4:12.03:0,12,617	0/0:4,0:4:6.02:0,6,429	0/0:7,0:7:7.31:0,7,435	1/1:5,18:23:9.03:612,9,0	0/0:13,0:13:28.34:0,28,2226	1/1:4,14:17:2.24:202,2,0	1/1:7,13:20:9.03:611,9,0	0/0:13,0:13:20.88:0,21,1417	1/1:9,0:8:3.01:354,3,0	0/0:8,0:8:14.04:0,14,687	1/1:7,1:8:2.44:131,2,0	1/1:5,11:15:11.94:444,12,0	0/1:15,0:15:99:167,0,106	1/1:4,3:7:3.01:70,3,0	0/0:10,0:8:15.01:0,15,314	0/0:16,0:15:28.34:0,28,2199	1/1:1,8:9:3.01:204,3,0	1/1:4,0:4:5.97:125,6,0	1/1:2,14:17:5.55:385,6,0	1/1:2,4:5:6.02:408,6,0
chr10	65690705	.	G	GGC	268.65	PASS	AB=0.948;AC=12;AF=0.214;AN=56;BaseQRankSum=5.413;DP=409;FS=17.657;HRun=0;HaplotypeScore=77.7794;InbreedingCoeff=-0.1269;MQ=48.15;MQ0=33;MQRankSum=-4.263;QD=1.88;ReadPosRankSum=-1.466;VQSLOD=0.2100;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:17:28.53:0,29,388	1/1:8,0:8:1.34:34,1,0	0/1:37,0:8:5.77:6,0,7	0/0:63,0:11:7.85:0,8,115	0/0:18,0:18:42.14:0,42,644	0/1:8,1:8:45.42:45,0,198	0/1:10,3:12:99:121,0,104	0/0:20,0:20:42.95:0,43,720	0/0:9,0:8:21.03:0,21,299	0/0:2,0:2:5.97:0,6,68	0/0:6,0:6:2.23:0,2,46	0/1:21,0:21:12.11:12,0,63	0/0:16,0:16:35.83:0,36,485	0/0:17,0:16:8.64:0,9,76	0/0:17,0:17:14.71:0,15,97	0/0:13,0:13:27.05:0,27,413	0/1:7,3:9:97.45:97,0,177	0/0:9,0:8:15.76:0,16,128	0/1:4,0:4:27.03:27,0,72	0/1:15,0:14:9.75:24,0,10	0/0:16,0:15:11.70:0,12,293	0/1:6,0:6:21.67:22,0,82	0/0:10,0:8:18.05:0,18,255	0/0:17,0:16:26.66:0,27,422	0/0:9,0:9:5.89:0,6,62	0/1:4,0:4:15.52:16,0,78	0/1:16,0:16:6.91:7,0,52	0/0:5,0:4:4.04:0,4,11
chr10	65691113	.	AT	A	438.75	PASS	AB=0.917;AC=3;AF=0.054;AN=56;BaseQRankSum=6.091;DP=487;FS=5.783;HRun=10;HaplotypeScore=53.9048;InbreedingCoeff=0.6080;MQ=68.30;MQ0=0;MQRankSum=2.035;QD=9.75;ReadPosRankSum=-3.430;VQSLOD=1.4524;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:8:21.06:0,21,232	0/0:5,0:5:15.04:0,15,166	0/0:8,0:7:9.02:0,9,96	0/0:4,0:4:3.48:0,3,32	0/0:26,2:28:49.93:0,50,732	0/0:23,1:24:37.12:0,37,638	0/0:11,0:12:20.13:0,20,291	1/1:2,21:23:62.78:533,63,0	0/0:14,0:14:36.10:0,36,398	0/0:22,0:22:22.39:0,22,170	0/0:16,1:17:16.96:0,17,183	0/0:24,0:25:72.03:0,72,777	0/0:23,0:23:66.16:0,66,715	0/0:13,0:13:39.11:0,39,431	0/0:18,0:18:48.13:0,48,531	0/0:22,0:22:62.52:0,63,326	0/0:20,0:20:28.41:0,28,538	0/0:16,0:16:42.91:0,43,222	0/0:14,0:14:36.07:0,36,381	0/1:19,2:22:1.14:1,0,428	0/0:17,0:17:45.12:0,45,498	0/0:18,0:18:45.12:0,45,491	0/0:17,0:17:39.06:0,39,409	0/0:19,0:19:54.13:0,54,589	0/0:14,0:14:36.10:0,36,398	0/0:20,0:20:36.42:0,36,571	0/0:38,3:41:81.89:0,82,1095	0/0:3,0:3:9.01:0,9,91
chr10	65695641	.	GCCA	G	3697.03	PASS	AB=0.905;AC=9;AF=0.161;AN=56;BaseQRankSum=10.713;DP=581;FS=0.000;HRun=0;HaplotypeScore=82.5739;InbreedingCoeff=0.8656;MQ=67.25;MQ0=0;MQRankSum=-0.396;QD=35.55;ReadPosRankSum=2.097;VQSLOD=3.9319;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:42:99:0,123,2735	0/0:8,0:8:24.08:0,24,539	0/0:11,0:11:29.97:0,30,627	0/0:15,0:14:29.17:0,29,748	0/0:18,0:18:54.17:0,54,1171	0/0:17,0:17:48.16:0,48,1078	0/0:14,0:14:39.13:0,39,899	0/0:29,0:29:81.28:0,81,1782	0/0:22,0:22:66.20:0,66,1474	1/1:0,22:22:63.18:1010,63,0	1/1:1,20:21:48.16:819,48,0	0/0:28,0:28:84.29:0,84,1895	0/0:32,0:32:90.31:0,90,1982	0/0:22,0:22:66.23:0,66,1486	0/0:25,0:24:75.24:0,75,1675	1/1:0,19:19:54.18:897,54,0	0/0:27,0:27:81.28:0,81,1838	1/1:2,21:23:54.18:921,54,0	0/0:30,0:30:87.21:0,87,1873	0/0:24,0:24:72.25:0,72,1643	0/0:26,0:26:75.22:0,75,1660	0/0:8,0:8:21.07:0,21,476	0/0:10,0:10:30.10:0,30,691	0/0:15,0:15:42.14:0,42,962	0/0:19,0:19:48.63:0,49,1053	0/1:17,2:19:51.14:51,0,983	0/0:25,0:25:72.25:0,72,1626	0/0:9,0:9:27.09:0,27,622
chr10	65695866	.	GTT	G	1589.70	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.255;DP=770;FS=10.532;HRun=2;HaplotypeScore=154.0927;InbreedingCoeff=0.9978;MQ=62.43;MQ0=1;MQRankSum=2.226;QD=45.42;ReadPosRankSum=-3.390;VQSLOD=1.5455;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:58:99:0,169,3311	0/0:15,0:15:42.08:0,42,851	0/0:29,0:28:82.89:0,83,1557	0/0:20,0:18:34.80:0,35,855	0/0:16,0:16:48.16:0,48,975	0/0:24,0:24:63.17:0,63,1214	0/0:26,0:26:75.09:0,75,1357	1/1:0,35:35:99:1685,105,0	0/0:17,0:17:51.18:0,51,1025	0/0:25,0:25:75.25:0,75,1465	0/0:18,0:18:54.19:0,54,1097	0/0:29,0:29:84.19:0,84,1569	0/0:31,0:31:93.31:0,93,1842	0/0:29,0:29:78.27:0,78,1580	0/0:27,0:27:78.21:0,78,1500	0/0:28,0:28:84.23:0,84,1619	0/0:33,0:33:96.20:0,96,1774	0/0:20,0:20:60.17:0,60,1155	0/0:17,0:17:51.08:0,51,925	0/0:35,0:35:99:0,105,2052	0/0:32,0:32:69.02:0,69,1131	0/0:27,0:27:75.24:0,75,1451	0/0:34,0:34:99:0,99,1957	0/0:44,0:44:99:0,132,2574	0/0:23,0:23:57.19:0,57,1120	0/0:30,0:30:90.24:0,90,1735	0/0:39,0:39:99:0,111,2224	0/0:9,0:9:24.06:0,24,447
chr10	65695901	.	C	CTAGGAG	30625.79	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-13.203;DP=777;FS=11.281;HRun=0;HaplotypeScore=148.4838;InbreedingCoeff=0.9995;MQ=59.32;MQ0=0;MQRankSum=-20.392;QD=71.72;ReadPosRankSum=1.325;VQSLOD=5.5243;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,150,3277	1/1:6,7:14:24.08:781,24,0	0/0:30,0:28:72.22:0,72,1443	0/0:18,0:17:30.10:0,30,604	0/0:17,0:17:51.18:0,51,1146	1/1:7,17:25:48.16:1609,48,0	1/1:9,15:25:51.18:1732,51,0	0/0:22,0:22:42.14:0,42,916	0/0:18,0:18:45.15:0,45,1011	0/0:24,0:24:60.21:0,60,1341	0/0:23,0:23:69.24:0,69,1554	1/1:10,32:42:99:3721,108,0	0/0:39,0:39:99:0,108,2366	1/1:7,28:35:81.28:2790,81,0	1/1:4,25:32:78.27:2645,78,0	0/0:32,0:32:90.31:0,90,2018	1/1:9,18:28:56.78:1937,57,0	0/0:17,0:17:45.15:0,45,967	1/1:10,12:22:42.14:1371,42,0	1/1:14,22:37:72.25:2459,72,0	1/1:14,14:29:38.37:1306,38,0	1/1:4,16:21:45.15:1489,45,0	0/0:24,0:24:63.22:0,63,1392	0/0:34,0:34:93.28:0,93,2034	1/1:5,24:30:63.22:2174,63,0	1/1:8,23:33:54.27:2465,54,0	1/1:9,33:44:93.79:3213,94,0	1/1:0,9:9:27.09:933,27,0
chr10	65696431	.	C	CA	1697.95	PASS	AB=0.909;AC=7;AF=0.125;AN=56;BaseQRankSum=-5.312;DP=636;FS=1.629;HRun=9;HaplotypeScore=64.0559;InbreedingCoeff=0.8510;MQ=71.55;MQ0=0;MQRankSum=-3.131;QD=22.34;ReadPosRankSum=-2.315;VQSLOD=3.6637;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:47.99:0,48,417	0/0:17,0:17:44.98:0,45,391	0/0:15,0:17:22.07:0,22,164	0/0:17,0:16:33.24:0,33,274	0/0:33,0:33:83.98:0,84,729	0/0:30,0:30:71.96:0,72,625	0/0:17,0:17:32.97:0,33,287	0/0:42,0:42:86.93:0,87,752	0/0:23,0:23:62.98:0,63,547	1/1:3,26:30:81.03:861,81,0	1/1:6,18:24:34.02:577,34,0	0/0:26,0:26:65.98:0,66,573	0/0:24,0:24:59.96:0,60,521	0/0:19,0:21:44.70:0,45,389	0/0:22,0:22:56.58:0,57,479	1/1:0,12:12:36.10:398,36,0	0/0:16,0:18:44.81:0,45,415	0/0:21,0:21:50.99:0,51,443	0/0:26,0:26:62.98:0,63,547	0/0:29,0:29:74.96:0,75,647	0/1:9,1:10:9.19:9,0,158	0/0:17,0:17:45.75:0,46,415	0/0:21,0:21:47.96:0,48,412	0/0:19,0:20:53:0,53,445	0/0:27,1:28:32.79:0,33,514	0/0:29,0:29:71.96:0,72,625	0/0:29,0:29:71.98:0,72,625	0/0:14,0:14:35.99:0,36,312
chr10	65696491	.	C	CTG	2468.03	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-5.147;DP=737;FS=0.000;HRun=0;HaplotypeScore=94.6016;InbreedingCoeff=0.8391;MQ=70.54;MQ0=1;MQRankSum=-1.314;QD=25.98;ReadPosRankSum=-0.191;VQSLOD=4.5133;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:42.06:0,42,488	0/0:18,0:18:39.12:0,39,465	0/0:44,0:33:34.58:0,35,479	0/0:38,0:33:47.77:0,48,495	0/0:28,0:28:72.22:0,72,858	0/0:26,0:26:66.18:0,66,764	0/0:21,0:21:54.14:0,54,621	0/0:42,0:42:27.13:0,27,613	0/0:27,0:27:66.15:0,66,741	1/1:14,14:27:47.85:835,48,0	1/1:11,14:26:1.40:620,1,0	0/0:21,0:23:62.86:0,63,707	0/0:28,0:28:57.15:0,57,656	0/0:24,0:24:63.19:0,63,750	0/0:23,0:23:51.15:0,51,607	1/1:3,12:15:36.12:570,36,0	0/0:20,0:21:47.98:0,48,550	1/1:6,19:26:6.39:585,6,0	0/0:33,0:33:60.13:0,60,668	0/0:36,0:36:90.21:0,90,1015	0/0:17,0:17:51.13:0,51,583	0/0:29,0:29:81.20:0,81,939	0/0:28,0:28:66.16:0,66,752	0/0:22,1:23:0.40:0,0,488	0/0:26,0:26:57.13:0,57,653	0/0:28,0:28:66.12:0,66,749	0/0:25,0:25:57.17:0,57,679	0/0:11,0:11:27.07:0,27,309
chr10	65697450	.	ATTGT	A	1893.25	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.553;DP=592;FS=0.598;HRun=0;HaplotypeScore=95.7794;InbreedingCoeff=0.9728;MQ=73.40;MQ0=1;MQRankSum=1.213;QD=35.72;ReadPosRankSum=1.315;VQSLOD=3.4881;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,99,2372	0/0:5,0:5:15.05:0,15,373	0/0:29,0:25:41.32:0,41,994	0/0:28,0:27:42.14:0,42,994	0/0:25,0:25:63.20:0,63,1518	0/0:26,0:26:66.23:0,66,1617	0/0:14,0:14:36.11:0,36,844	0/0:37,0:37:78.25:0,78,1767	0/0:9,0:9:15.05:0,15,349	1/1:4,17:21:51.17:860,51,0	1/1:3,22:25:60.20:970,60,0	0/0:25,0:25:63.21:0,63,1498	0/0:17,0:17:45.15:0,45,1120	0/0:24,0:24:66.20:0,66,1543	0/0:13,0:13:33.10:0,33,726	1/1:1,6:7:12.04:203,12,0	0/0:27,0:27:50.99:0,51,1244	0/0:9,0:19:21.06:0,21,372	0/0:12,0:12:30.10:0,30,713	0/0:27,0:27:59.79:0,60,1376	0/0:17,0:17:45.15:0,45,1091	0/0:19,0:19:51.18:0,51,1265	0/0:19,0:19:54.19:0,54,1270	0/0:10,0:10:27.09:0,27,607	0/0:22,0:22:54.14:0,54,1278	0/0:31,0:31:75.26:0,75,1867	0/0:31,0:31:60.21:0,60,1370	0/0:10,0:10:18.06:0,18,448
chr10	65698934	.	AT	A	2342.82	PASS	AB=0.880;AC=7;AF=0.125;AN=56;BaseQRankSum=8.372;DP=655;FS=3.513;HRun=3;HaplotypeScore=67.0710;InbreedingCoeff=0.8370;MQ=81.84;MQ0=0;MQRankSum=-2.083;QD=23.91;ReadPosRankSum=2.300;VQSLOD=3.0683;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:39:99:0,117,1622	0/0:8,0:8:24.08:0,24,345	0/0:20,0:20:60.18:0,60,813	0/0:17,0:19:34.65:0,35,585	0/0:29,0:29:81.24:0,81,1112	0/0:26,0:26:72.23:0,72,1017	0/0:19,0:19:54.14:0,54,716	0/0:29,0:29:84.25:0,84,1139	0/0:24,0:24:69.19:0,69,940	1/1:1,24:25:72.22:878,72,0	1/1:1,24:25:63.20:781,63,0	0/0:20,0:20:57.17:0,57,781	0/0:30,0:30:87.17:0,87,1136	0/0:25,0:25:69.21:0,69,974	0/0:25,0:25:72.20:0,72,970	1/1:1,25:26:66.21:818,66,0	0/0:25,0:25:75.20:0,75,1028	0/0:25,0:25:66.20:0,66,912	0/0:15,0:15:45.13:0,45,613	0/0:17,0:17:48.15:0,48,672	0/0:29,0:29:84.28:0,84,1209	0/0:21,0:21:63.19:0,63,874	0/0:19,0:19:54.18:0,54,777	0/0:29,0:29:84.28:0,84,1208	0/0:30,0:30:90.29:0,90,1280	0/1:19,3:22:14.20:14,0,680	0/0:25,0:25:75.22:0,75,1022	0/0:8,0:8:15.05:0,15,216
chr10	65700221	.	C	CA	1853.85	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-10.138;DP=437;FS=4.628;HRun=7;HaplotypeScore=40.9580;InbreedingCoeff=0.9678;MQ=81.94;MQ0=0;MQRankSum=-3.452;QD=26.87;ReadPosRankSum=2.064;VQSLOD=4.1554;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:45.07:0,45,434	0/0:6,0:6:18.03:0,18,174	0/0:19,0:19:48.06:0,48,456	0/0:10,0:10:16.43:0,16,149	0/0:29,0:29:81.12:0,81,777	0/0:15,0:15:45.07:0,45,434	0/0:10,0:10:27.04:0,27,261	0/0:31,0:31:78.12:0,78,753	0/0:5,0:5:15.02:0,15,145	1/1:2,17:19:51.11:600,51,0	1/1:1,20:21:54.17:652,54,0	0/0:12,0:12:36.06:0,36,348	0/0:15,0:15:45.07:0,45,435	0/0:7,0:7:21.03:0,21,203	0/0:18,0:18:48.07:0,48,464	1/1:3,8:11:18.06:217,18,0	0/0:21,0:21:54.09:0,54,521	1/1:2,16:18:45.14:544,45,0	0/0:19,0:19:48.05:0,48,457	0/0:27,0:27:78.12:0,78,753	0/0:14,0:14:33.05:0,33,319	0/0:9,0:9:24.04:0,24,232	0/0:18,0:18:54.09:0,54,521	0/0:4,0:4:9.01:0,9,87	0/0:12,0:12:36.02:0,36,335	0/0:22,0:22:66.11:0,66,637	0/0:22,0:22:60.10:0,60,579	0/0:6,0:6:18.03:0,18,173
chr10	65701885	.	TTCTGTC	T	4945.75	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=12.547;DP=798;FS=2.009;HRun=0;HaplotypeScore=164.1602;InbreedingCoeff=0.9682;MQ=84.31;MQ0=0;MQRankSum=-13.171;QD=53.76;ReadPosRankSum=-1.430;VQSLOD=4.8396;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,123,4137	0/0:9,0:9:21.07:0,21,742	0/0:28,0:28:69.24:0,69,2244	0/0:29,0:29:78.26:0,78,2421	0/0:18,0:18:51.16:0,51,1719	0/0:36,0:36:99:0,102,3510	0/0:24,0:24:66.23:0,66,2316	0/0:48,0:48:99:0,126,4246	0/0:38,0:38:99:0,105,3688	1/1:2,23:25:69.24:1578,69,0	1/1:4,15:19:45.11:810,45,0	0/0:45,0:45:99:0,132,4637	0/0:38,0:38:99:0,114,4013	0/0:30,0:30:84.29:0,84,2900	0/0:44,0:44:99:0,117,4027	1/1:2,41:43:99:2417,111,0	0/0:24,0:24:72.25:0,72,2480	1/1:2,3:5:6.02:140,6,0	0/0:17,0:17:48.16:0,48,1558	0/0:39,0:39:99:0,108,3601	0/0:26,0:26:63.20:0,63,2107	0/0:26,0:26:66.21:0,66,2209	0/0:9,0:9:27.09:0,27,954	0/0:31,0:31:93.32:0,93,3228	0/0:27,0:27:75.26:0,75,2610	0/0:30,0:30:78.27:0,78,2730	0/0:37,0:37:99:0,108,3767	0/0:8,0:8:24.08:0,24,833
chr10	65702806	.	CAG	C	611.25	PASS	AB=0.944;AC=13;AF=0.232;AN=56;BaseQRankSum=1.874;DP=783;FS=3.175;HRun=0;HaplotypeScore=214.9506;InbreedingCoeff=-0.1689;MQ=51.32;MQ0=10;MQRankSum=0.492;QD=2.15;ReadPosRankSum=-4.656;VQSLOD=1.6336;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:57:99:0,139,2883	0/1:10,1:11:14.19:14,0,150	0/0:33,1:13:3.16:0,3,411	0/0:42,0:21:28.15:0,28,763	0/0:30,0:30:90.26:0,90,1532	0/1:24,1:25:76.22:76,0,172	0/1:22,1:23:12.99:13,0,185	0/0:38,0:35:99:0,102,1431	0/0:27,0:27:75.16:0,75,1273	0/0:18,0:18:46.24:0,46,504	0/0:31,0:31:26.96:0,27,300	0/0:23,2:25:35.60:0,36,284	0/0:26,0:26:72.21:0,72,1250	0/1:20,1:21:67.34:67,0,238	0/0:32,1:33:33.39:0,33,509	0/0:30,0:30:23.97:0,24,316	0/1:35,0:35:62.18:62,0,378	0/0:19,0:19:32.87:0,33,457	0/1:20,1:20:44.39:44,0,198	0/1:25,2:27:99:143,0,176	0/1:43,3:46:90.63:91,0,395	0/1:23,3:26:58.88:59,0,233	0/0:25,0:25:69.10:0,69,1128	0/0:45,0:45:99:0,132,2467	0/1:14,1:15:31.35:31,0,185	0/1:29,2:31:99:119,0,346	0/0:19,0:19:29.33:0,29,361	1/1:1,1:3:2.63:43,3,0
chr10	65702814	.	CAG	C	1126.55	PASS	AB=0.988;AC=19;AF=0.339;AN=56;BaseQRankSum=0.583;DP=783;FS=5.545;HRun=0;HaplotypeScore=215.7659;InbreedingCoeff=-0.1225;MQ=50.69;MQ0=12;MQRankSum=0.273;QD=2.84;ReadPosRankSum=-7.513;VQSLOD=0.1380;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,117,2348	0/1:11,0:11:15.31:15,0,149	0/0:44,0:15:35.69:0,36,446	0/0:46,0:24:55.29:0,55,906	0/0:30,0:30:90.30:0,90,1532	0/1:23,0:23:54.78:55,0,174	0/1:22,0:22:38.24:38,0,182	0/1:43,0:39:99:162,0,442	0/0:25,0:25:18.99:0,19,447	0/1:14,3:17:26.45:211,0,26	1/1:17,11:28:2.30:93,2,0	0/0:25,0:25:35.66:0,36,311	0/0:24,0:24:69.16:0,69,1130	0/1:21,0:21:43.44:43,0,237	0/0:32,0:32:32.88:0,33,508	1/1:24,8:32:6.36:51,6,0	0/1:31,0:31:75.99:76,0,376	0/0:18,0:18:15.17:0,15,112	0/1:16,0:16:10.87:11,0,159	0/1:24,0:24:99:103,0,182	0/1:48,0:48:99:113,0,388	0/1:27,0:27:79.79:80,0,232	0/0:22,0:22:57.18:0,57,979	0/0:48,0:48:99:0,141,2303	0/1:19,0:19:50.89:51,0,180	0/1:30,0:30:99:129,0,344	0/0:18,0:18:48.77:0,49,377	1/1:4,0:4:4.46:62,4,0
chr10	65702816	.	GACACACACACGCAT	G	1470.68	PASS	AB=0.828;AC=8;AF=0.143;AN=56;BaseQRankSum=0.115;DP=783;FS=7.908;HRun=0;HaplotypeScore=365.5818;InbreedingCoeff=0.6550;MQ=50.52;MQ0=12;MQRankSum=-3.552;QD=13.13;ReadPosRankSum=-2.727;VQSLOD=0.5968;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:55:99:0,123,6229	0/0:11,0:11:30.10:0,30,1379	0/0:44,0:15:38.82:0,39,966	0/0:46,0:25:69.18:0,69,1984	0/0:30,0:30:90.30:0,90,4579	0/0:22,0:22:39.56:0,40,2041	0/0:22,0:22:36.01:0,36,1579	0/0:43,0:39:78.13:0,78,2385	0/0:25,0:25:60.20:0,60,3299	1/1:16,0:16:28.68:886,29,0	1/1:29,0:29:12.03:245,12,0	0/0:25,0:25:39.13:0,39,2044	0/0:24,0:24:63.05:0,63,3210	0/0:20,0:20:44.92:0,45,2152	0/0:32,0:32:78.10:0,78,4102	1/1:31,0:31:5.70:194,6,0	0/0:33,0:33:66.20:0,66,3911	0/1:9,10:19:21.67:273,0,22	0/1:17,0:17:18.01:18,0,1247	0/0:23,0:23:48.02:0,48,2284	0/0:48,0:48:57.65:0,58,4141	0/0:27,0:27:48.15:0,48,2606	0/0:22,0:22:54.18:0,54,3059	0/0:47,0:47:99:0,120,6106	0/0:20,0:20:48.16:0,48,2602	0/0:30,0:30:63.73:0,64,3191	0/0:18,0:18:54.18:0,54,2673	0/0:4,0:4:12:0,12,373
chr10	65702818	.	CACACACACGCAT	C	1142.53	PASS	AB=1.000;AC=8;AF=0.143;AN=56;BaseQRankSum=1.784;DP=787;FS=8.533;HRun=0;HaplotypeScore=342.7430;InbreedingCoeff=0.6366;MQ=50.45;MQ0=13;MQRankSum=-3.614;QD=10.20;ReadPosRankSum=-3.145;VQSLOD=0.4774;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:98.22:0,98,5795	0/0:11,0:11:30.10:0,30,1309	0/0:44,0:15:38.70:0,39,897	0/0:49,0:28:80.96:0,81,2241	0/0:30,0:30:90.30:0,90,4064	0/0:24,0:24:45.58:0,46,2150	0/0:22,0:22:35.66:0,36,1544	0/0:42,0:38:78.12:0,78,2190	0/0:25,0:25:60.20:0,60,2953	1/1:13,3:16:28.91:695,29,0	1/1:18,11:29:12:228,12,0	0/0:25,0:25:39:0,39,1875	0/0:24,0:24:63.05:0,63,2829	0/0:20,0:20:44.58:0,45,2018	0/0:32,0:32:78.14:0,78,3737	1/1:23,8:31:5.77:137,6,0	0/0:33,0:33:63.59:0,64,3669	0/1:18,0:18:18.48:173,0,18	0/1:18,0:18:52.96:53,0,1143	0/0:23,0:23:47.80:0,48,2301	0/0:49,0:49:64.32:0,64,3869	0/0:27,0:27:48.15:0,48,2400	0/0:22,0:22:54.18:0,54,2732	0/0:44,0:44:99:0,120,5423	0/0:20,0:20:48.16:0,48,2435	0/0:32,0:31:62.57:0,63,3045	0/0:19,0:19:57.19:0,57,2526	0/0:4,0:4:5.31:0,5,329
chr10	65702824	.	CACGCAT	C	912.90	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=3.588;DP=775;FS=6.203;HRun=0;HaplotypeScore=259.6491;InbreedingCoeff=0.7650;MQ=50.65;MQ0=14;MQRankSum=-3.234;QD=8.22;ReadPosRankSum=-1.850;VQSLOD=1.8215;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,135,3942	0/0:11,0:11:30.10:0,30,869	0/0:50,0:18:50.67:0,51,885	0/0:49,0:28:81.03:0,81,1706	0/0:30,0:30:90.29:0,90,2748	0/0:24,0:24:51.59:0,52,1520	0/0:22,0:22:41.82:0,42,1163	0/0:34,0:30:84.23:0,84,1932	0/0:24,0:24:66.23:0,66,2083	1/1:14,1:15:36.08:633,36,0	1/1:17,9:26:11.74:159,12,0	0/0:25,0:25:41.97:0,42,1274	0/0:25,0:25:72.08:0,72,2030	0/0:20,0:20:47.84:0,48,1357	0/0:35,0:35:87.16:0,87,2584	1/1:11,21:32:5.92:141,6,0	0/0:32,0:32:54:0,54,2381	1/1:14,0:14:3.69:112,4,0	0/1:24,0:23:15.24:15,0,969	0/0:24,0:24:50.92:0,51,1576	0/0:44,0:44:76.87:0,77,2327	0/0:27,0:27:51.04:0,51,1563	0/0:22,0:22:57.19:0,57,1852	0/0:42,0:42:99:0,120,3680	0/0:20,0:20:51.17:0,51,1575	0/0:32,0:31:46.54:0,47,2187	0/0:19,0:19:57.16:0,57,1669	0/0:4,0:4:6.94:0,7,232
chr10	65702825	.	ACG	A	282.37	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=6.009;DP=774;FS=5.848;HRun=0;HaplotypeScore=211.7078;InbreedingCoeff=0.9041;MQ=50.85;MQ0=14;MQRankSum=-3.814;QD=3.32;ReadPosRankSum=-1.413;VQSLOD=1.6611;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:98.05:0,98,2386	0/0:11,0:11:29.13:0,29,508	0/0:50,0:18:43.76:0,44,598	0/0:49,0:28:66.39:0,66,1200	0/0:31,0:31:93.08:0,93,1651	0/0:24,0:24:53.80:0,54,804	0/0:22,0:22:38.82:0,39,625	0/0:33,0:30:87.13:0,87,1481	0/0:24,0:24:66.17:0,66,1195	1/1:12,2:14:18.88:226,19,0	1/1:25,1:26:11.87:82,12,0	0/0:25,0:25:42.11:0,42,759	0/0:25,0:25:71.96:0,72,1188	0/0:20,0:20:47.36:0,47,771	0/0:36,0:36:89.68:0,90,1506	1/1:31,0:31:5.70:71,6,0	0/0:31,1:32:54.29:0,54,1265	1/1:14,0:14:7.79:46,8,0	0/0:24,0:23:23.58:0,24,536	0/0:22,0:22:50.06:0,50,785	0/0:44,0:44:64.27:0,64,1236	0/0:27,0:27:50.06:0,50,805	0/0:23,0:23:60.14:0,60,1059	0/0:43,0:43:99:0,123,2288	0/0:20,0:20:49.66:0,50,795	0/0:31,0:30:65.57:0,66,1205	0/0:19,0:19:57.13:0,57,1006	0/0:4,0:4:5.79:0,6,86
chr10	65704184	.	C	CT	5054.31	PASS	AB=0.842;AC=31;AF=0.554;AN=56;BaseQRankSum=-8.541;DP=703;FS=14.402;HRun=12;HaplotypeScore=80.4760;InbreedingCoeff=0.5891;MQ=72.31;MQ0=0;MQRankSum=-0.372;QD=11.28;ReadPosRankSum=-1.264;VQSLOD=2.4799;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:21.19:0,21,283	1/1:1,3:6:8.01:96,8,0	0/1:22,0:20:8.53:9,0,95	0/0:12,0:9:5.11:0,5,47	0/0:27,0:27:34.93:0,35,261	1/1:3,24:27:44.97:424,45,0	1/1:5,13:19:20.87:189,21,0	0/1:29,3:33:46.43:46,0,312	0/0:8,0:25:36.39:0,36,105	0/0:25,1:28:28.50:0,29,355	0/1:21,2:23:16.70:17,0,221	0/1:12,23:34:6.59:237,0,7	0/0:38,0:38:71.33:0,71,522	1/1:6,18:24:3.85:187,4,0	1/1:8,24:34:38.69:491,39,0	0/0:29,0:30:33.76:0,34,373	1/1:10,18:29:23.15:247,23,0	0/0:20,0:21:9.01:0,9,198	0/1:7,3:10:5.64:102,0,6	1/1:5,32:38:89.94:852,90,0	1/1:7,11:21:41.58:364,42,0	1/1:6,20:26:45.02:428,45,0	0/0:26,0:30:34.60:0,35,349	0/0:21,0:21:38.66:0,39,282	1/1:4,17:23:41.74:379,42,0	1/1:13,15:28:1.18:319,1,0	1/1:9,23:33:29.96:439,30,0	1/1:5,9:17:24.09:230,24,0
chr10	65707093	.	GA	G	7932.21	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=7.585;DP=558;FS=1.271;HRun=10;HaplotypeScore=66.3114;InbreedingCoeff=0.9448;MQ=76.49;MQ0=0;MQRankSum=-3.032;QD=19.21;ReadPosRankSum=2.148;VQSLOD=5.8386;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:14,1:17:21.73:0,22,426	1/1:0,4:4:12:104,12,0	0/0:16,0:14:2.26:0,2,166	0/0:20,1:20:10.34:0,10,279	0/0:20,0:20:51.13:0,51,556	1/1:4,16:20:41.99:365,42,0	1/1:0,13:13:35.99:312,36,0	1/1:3,18:21:23.81:435,24,0	1/1:1,17:18:21.18:410,21,0	1/1:2,0:18:32.59:95,33,0	1/1:3,0:15:22.40:65,22,0	1/1:3,21:25:56.02:475,56,0	0/0:28,0:28:72.18:0,72,787	1/1:2,12:14:32.99:286,33,0	1/1:2,17:19:50.99:443,51,0	1/1:2,0:16:24.44:72,24,0	1/1:3,24:27:68.98:599,69,0	1/1:2,6:8:17.99:154,18,0	1/1:4,25:29:44.79:615,45,0	1/1:3,24:27:68.98:599,69,0	1/1:3,31:36:82.04:689,82,0	1/1:5,23:28:65.97:572,66,0	0/0:19,0:19:48.13:0,48,526	0/0:23,0:24:66.01:0,66,711	1/1:0,17:17:47.99:417,48,0	1/1:1,20:22:59.01:497,59,0	1/1:3,25:28:62.96:546,63,0	1/1:0,8:8:21:182,21,0
chr10	65707787	.	TA	T	868.78	PASS	AB=0.818;AC=10;AF=0.185;AN=54;BaseQRankSum=7.856;DP=407;FS=2.074;HRun=10;HaplotypeScore=50.3808;InbreedingCoeff=0.7594;MQ=62.27;MQ0=9;MQRankSum=-0.288;QD=12.78;ReadPosRankSum=0.860;VQSLOD=3.1970;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:38:99:0,102,1092	0/0:6,0:6:18.05:0,18,199	0/0:17,0:8:14.25:0,14,133	0/0:10,0:6:8.23:0,8,68	0/0:17,0:17:45.12:0,45,498	0/0:24,0:24:62.99:0,63,669	0/0:11,0:9:24.05:0,24,257	0/0:29,0:28:84.19:0,84,904	0/0:1,0:7:20.03:0,20,109	1/1:3,9:12:26.96:229,27,0	1/1:3,17:20:47.93:410,48,0	0/0:13,0:13:39.06:0,39,412	0/0:15,0:15:36.10:0,36,398	0/0:7,0:7:21.04:0,21,223	0/0:16,0:16:39.09:0,39,422	1/1:1,9:9:26.99:234,27,0	0/0:30,0:29:81.19:0,81,877	1/1:2,6:7:15:130,15,0	0/0:16,0:15:15.63:0,16,365	0/0:11,0:10:21.06:0,21,232	0/1:7,2:9:2.50:3,0,185	0/0:5,0:5:15.04:0,15,166	0/1:7,2:9:24.89:25,0,205	./.	0/0:14,0:14:36.09:0,36,390	0/0:15,0:15:42.10:0,42,457	0/0:21,0:21:48.13:0,48,531	0/0:15,0:14:36.08:0,36,388
chr10	65708537	.	CTT	C	1685.52	PASS	AB=0.657;AC=26;AF=0.464;AN=56;BaseQRankSum=-2.000;DP=369;FS=2.532;HRun=17;HaplotypeScore=51.3381;InbreedingCoeff=0.5132;MQ=70.67;MQ0=4;MQRankSum=0.152;QD=8.47;ReadPosRankSum=4.563;VQSLOD=0.3588;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:5,1:18:0.52:1,0,96	1/1:2,8:10:16.17:139,16,0	0/0:26,0:7:10.56:0,11,99	0/0:20,0:12:6.67:0,7,55	0/0:7,0:12:18.10:0,18,94	1/1:3,15:19:33.95:276,34,0	0/1:2,3:11:3.64:77,0,4	0/0:12,0:25:12.71:0,13,92	0/0:7,0:10:10.12:0,10,63	0/0:13,0:15:25.79:0,26,260	0/0:13,0:14:30.05:0,30,341	1/1:5,5:10:14.82:119,15,0	0/0:11,0:13:26.41:0,26,277	0/1:3,4:8:11.53:78,0,12	1/1:2,6:9:17.59:130,18,0	0/0:11,0:11:27.04:0,27,308	1/1:5,8:16:20.10:181,20,0	0/0:9,1:12:2:0,2,187	0/1:7,4:12:1.57:58,0,2	1/1:3,5:11:4.51:95,5,0	0/0:4,0:4:0:0,0,0	1/1:1,2:4:8.71:59,9,0	0/1:5,0:6:6.91:7,0,52	0/0:6,0:8:6.02:0,6,75	1/1:3,12:15:20.71:166,21,0	0/1:10,13:24:29.34:196,0,29	1/1:6,11:20:2.10:173,2,0	1/1:1,5:6:14.92:119,15,0
chr10	65709934	.	C	CA	201	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=2.020;DP=577;FS=9.060;HRun=8;HaplotypeScore=60.1872;InbreedingCoeff=0.6045;MQ=74.67;MQ0=2;MQRankSum=-0.397;QD=5.03;ReadPosRankSum=-2.434;VQSLOD=-0.4218;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:77.91:0,78,686	0/0:6,0:6:12:0,12,110	0/1:26,0:22:29.23:29,0,233	0/0:20,0:16:9.23:0,9,134	0/0:27,0:27:77.96:0,78,699	0/0:18,0:18:44.98:0,45,401	0/0:19,0:19:57.03:0,57,521	0/0:33,0:33:52.96:0,53,593	1/1:5,9:14:24.07:277,24,0	0/0:19,0:19:47.81:0,48,418	0/0:25,0:25:71.04:0,71,624	0/0:17,0:17:47.96:0,48,422	0/0:20,0:20:54.03:0,54,494	0/0:15,0:15:45.01:0,45,406	0/0:17,0:17:41.99:0,42,377	0/0:21,0:21:51.01:0,51,462	0/0:24,0:24:68.96:0,69,618	0/0:24,0:24:65.90:0,66,579	0/0:19,0:19:45:0,45,412	0/0:27,0:27:59.97:0,60,539	0/0:15,0:15:38.92:0,39,341	0/0:31,0:31:81.01:0,81,737	0/0:20,0:20:54.02:0,54,493	0/0:19,0:19:31.11:0,31,405	0/0:19,0:19:51.01:0,51,463	0/0:16,0:16:48.03:0,48,439	0/0:27,0:27:68.98:0,69,622	0/0:9,0:9:17.99:0,18,165
chr10	65710012	.	AACACATAATTT	A	1515.23	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.551;DP=598;FS=0.000;HRun=0;HaplotypeScore=186.2377;InbreedingCoeff=0.9938;MQ=73.87;MQ0=0;MQRankSum=-4.548;QD=72.15;ReadPosRankSum=-1.861;VQSLOD=2.9897;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:34:99:0,102,5656	0/0:13,0:13:39.12:0,39,2068	0/0:14,0:13:27.09:0,27,1156	0/0:11,0:11:21.02:0,21,749	0/0:22,0:22:57.18:0,57,3021	0/0:20,0:19:57.20:0,57,3134	0/0:25,0:25:69.24:0,69,3358	1/1:2,19:20:51.16:1610,51,0	0/0:15,0:15:45.15:0,45,2446	0/0:18,0:18:54.19:0,54,2935	0/0:23,0:23:63.20:0,63,3111	0/0:24,0:24:57.18:0,57,3028	0/0:32,0:32:93.32:0,93,5199	0/0:19,0:19:57.18:0,57,2925	0/0:24,0:24:72.25:0,72,3887	0/0:21,0:21:60.21:0,60,3360	0/0:25,0:25:75.24:0,75,3965	0/0:19,0:19:54.16:0,54,2844	0/0:22,0:22:57.18:0,57,2820	0/0:31,0:31:93.32:0,93,4950	0/0:14,0:14:42.14:0,42,2363	0/0:16,0:16:48.16:0,48,2605	0/0:29,0:29:81.26:0,81,4138	0/0:19,0:19:54.16:0,54,2810	0/0:25,0:25:69.21:0,69,3428	0/0:19,0:19:51.18:0,51,2660	0/0:33,0:33:93.32:0,93,5124	0/0:9,0:9:27.09:0,27,1532
chr10	65710873	.	TACTC	T	702.63	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.153;DP=481;FS=0.000;HRun=0;HaplotypeScore=93.7796;InbreedingCoeff=0.8190;MQ=77.77;MQ0=2;MQRankSum=-1.904;QD=46.84;ReadPosRankSum=0.500;VQSLOD=3.6674;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:66.23:0,66,1776	0/0:8,0:8:24.08:0,24,648	0/0:10,0:10:27.07:0,27,612	0/0:9,0:10:3.67:0,4,437	0/0:29,0:29:87.30:0,87,2321	0/0:20,0:20:48.14:0,48,1235	0/0:10,0:10:21.07:0,21,529	0/0:27,0:27:81.28:0,81,2144	1/1:0,15:15:42.14:797,42,0	0/0:18,0:18:54.19:0,54,1459	0/0:25,0:25:75.26:0,75,2019	0/0:16,0:16:45.15:0,45,1198	0/0:21,0:21:63.22:0,63,1668	0/0:15,0:15:42.14:0,42,1118	0/0:22,0:22:66.23:0,66,1767	0/0:23,0:23:69.24:0,69,1860	0/0:19,0:19:48.16:0,48,1278	0/0:17,0:16:51.18:0,51,1365	0/0:18,0:18:48.16:0,48,1272	0/0:20,0:18:51.13:0,51,1314	0/0:5,0:5:12.04:0,12,324	0/0:7,0:7:21.07:0,21,567	0/0:12,0:12:36.12:0,36,972	0/0:7,0:7:21.07:0,21,564	0/0:22,0:22:60.21:0,60,1618	0/0:30,0:30:87.29:0,87,2250	0/0:26,0:26:75.26:0,75,2009	0/0:5,0:5:15.05:0,15,404
chr10	65710933	.	CTT	C	10028.53	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=12.436;DP=501;FS=0.000;HRun=3;HaplotypeScore=61.1584;InbreedingCoeff=0.9937;MQ=78.32;MQ0=2;MQRankSum=-1.095;QD=40.11;ReadPosRankSum=2.396;VQSLOD=4.3045;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:87.23:0,87,1559	1/1:0,10:10:30.10:459,30,0	0/0:15,0:15:44.88:0,45,747	0/0:10,0:10:27.09:0,27,492	0/0:24,0:24:72.25:0,72,1360	1/1:0,23:23:57.19:873,57,0	1/1:0,18:18:45.15:689,45,0	0/0:34,0:34:99:0,102,1895	0/0:21,0:21:60.19:0,60,1097	0/0:18,0:18:51.17:0,51,985	0/0:22,0:22:66.23:0,66,1257	1/1:0,18:18:51.17:781,51,0	0/0:14,0:14:42.14:0,42,773	1/1:0,14:14:42.14:643,42,0	1/1:0,11:11:33.11:505,33,0	0/0:23,0:23:69.24:0,69,1327	1/1:0,29:29:69.23:1049,69,0	0/0:18,0:17:51.17:0,51,984	1/1:0,9:9:27.08:394,27,0	1/1:0,29:27:66.22:1011,66,0	1/1:0,4:4:12.04:184,12,0	1/1:0,8:8:24.08:367,24,0	0/0:15,0:15:45.15:0,45,863	0/0:8,0:8:24.08:0,24,464	1/1:0,18:18:42.14:643,42,0	1/1:0,29:29:87.30:1328,87,0	1/1:2,21:23:54.18:826,54,0	1/1:0,7:7:18.06:275,18,0
chr10	65711851	.	CAAAGAAAG	C	4445.98	PASS	AB=0.688;AC=27;AF=0.563;AN=48;BaseQRankSum=-5.461;DP=613;FS=0.000;HRun=0;HaplotypeScore=175.0060;InbreedingCoeff=0.8050;MQ=60.74;MQ0=3;MQRankSum=-2.304;QD=13.76;ReadPosRankSum=2.448;VQSLOD=3.9725;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:25:21.07:0,21,648	1/1:4,5:9:6.02:146,6,0	./.	./.	0/0:12,0:18:33.11:0,33,943	0/1:12,8:22:9.29:260,0,9	1/1:11,0:11:2.98:21,3,0	./.	0/0:12,0:19:17.97:0,18,162	0/0:40,0:40:57.20:0,57,1538	0/0:21,0:21:28.91:0,29,710	1/1:20,9:29:9.03:183,9,0	0/0:17,0:25:21.07:0,21,686	1/1:21,15:36:18.01:367,18,0	1/1:15,15:30:21.07:481,21,0	0/0:28,0:28:42.14:0,42,1205	1/1:23,5:28:6.02:143,6,0	0/0:19,0:19:12.04:0,12,336	1/1:20,10:29:30.04:580,30,0	1/1:16,13:29:33:569,33,0	./.	1/1:10,3:13:3.01:73,3,0	0/0:23,0:23:24.08:0,24,892	0/0:11,0:14:15.05:0,15,462	1/1:10,7:17:14.98:308,15,0	1/1:12,7:19:21.06:440,21,0	1/1:25,13:38:24.08:582,24,0	1/1:7,4:11:12.03:292,12,0
chr10	65712234	.	CT	C	16470.06	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=7.911;DP=629;FS=2.348;HRun=2;HaplotypeScore=66.3030;InbreedingCoeff=0.9990;MQ=88.19;MQ0=0;MQRankSum=-5.476;QD=36.12;ReadPosRankSum=3.940;VQSLOD=5.4776;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,129,1932	1/1:0,7:7:21.07:273,21,0	0/0:24,0:24:57.90:0,58,883	0/0:26,0:26:69.94:0,70,973	0/0:25,0:25:69.23:0,69,1033	1/1:0,24:24:72.23:935,72,0	1/1:1,16:17:39.13:506,39,0	1/1:0,35:35:99:1334,105,0	1/1:0,22:22:66.21:857,66,0	1/1:0,14:14:39.13:505,39,0	1/1:0,14:14:42.14:545,42,0	1/1:0,21:21:54.18:700,54,0	0/0:22,0:22:63.21:0,63,944	1/1:0,18:18:48.16:623,48,0	1/1:0,25:25:69.22:896,69,0	1/1:0,23:23:69.22:896,69,0	1/1:0,39:39:99:1441,111,0	1/1:0,10:10:27.09:351,27,0	1/1:0,20:20:60.20:779,60,0	1/1:0,27:27:69.18:877,69,0	1/1:1,37:38:99:1324,102,0	1/1:0,17:17:45.15:584,45,0	0/0:13,0:13:39.12:0,39,564	0/0:20,0:20:57.17:0,57,817	1/1:0,19:19:54.18:701,54,0	1/1:1,20:21:60.15:746,60,0	1/1:2,21:23:57.18:740,57,0	1/1:0,22:22:66.21:857,66,0
chr10	65716057	.	G	GGTTT	9598.59	PASS	AB=0.579;AC=28;AF=0.500;AN=56;BaseQRankSum=12.931;DP=643;FS=0.000;HRun=0;HaplotypeScore=136.2173;InbreedingCoeff=-0.0321;MQ=73.64;MQ0=0;MQRankSum=-5.955;QD=20.08;ReadPosRankSum=5.137;VQSLOD=4.4942;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:81.24:0,81,1574	0/1:2,0:14:18.74:180,0,19	0/0:22,0:21:19.49:0,19,817	0/0:13,0:13:30.33:0,30,443	0/0:32,0:35:99:0,102,1844	0/1:6,0:27:47.33:425,0,47	0/1:7,0:29:30.31:458,0,30	0/1:15,1:33:99:995,0,121	1/1:1,0:15:24.22:608,24,0	0/1:12,0:33:99:753,0,119	1/1:3,1:23:38.07:774,38,0	1/1:3,0:23:7.63:376,8,0	0/0:20,0:21:60.09:0,60,1041	1/1:3,0:23:37.03:461,37,0	0/1:6,0:29:40.41:421,0,40	0/1:6,0:24:14.02:628,0,14	0/1:6,0:27:59.29:315,0,59	0/1:6,1:25:28.03:634,0,28	1/1:3,0:15:2.40:356,2,0	1/1:1,0:28:39.87:564,40,0	0/1:5,0:18:99:173,0,114	0/1:6,0:21:63.37:344,0,63	0/0:27,0:27:78.13:0,78,1515	0/0:19,0:19:54.14:0,54,1044	0/1:3,0:22:10.20:335,0,10	0/1:5,0:22:43.77:409,0,44	0/1:11,0:23:53.99:277,0,54	1/1:1,0:4:11.99:112,12,0
chr10	65716334	.	G	GA	2639.65	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-9.622;DP=717;FS=1.469;HRun=6;HaplotypeScore=66.7343;InbreedingCoeff=0.9996;MQ=78.75;MQ0=0;MQRankSum=-1.730;QD=27.79;ReadPosRankSum=1.436;VQSLOD=4.3906;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:78.17:0,78,790	0/0:10,0:10:30.07:0,30,306	0/0:31,0:30:72.05:0,72,695	0/0:16,0:15:33.40:0,33,300	0/0:40,0:40:99:0,108,1087	0/0:31,0:32:95.24:0,95,949	0/0:19,0:19:54.02:0,54,517	0/0:38,0:38:99:0,105,1060	0/0:25,0:25:72.11:0,72,713	1/1:3,35:38:99:1254,102,0	1/1:2,22:24:60.15:736,60,0	0/0:29,0:29:81.10:0,81,800	0/0:26,0:26:66.14:0,66,667	0/0:21,0:21:60.12:0,60,607	0/0:32,0:32:90.19:0,90,910	1/1:5,28:33:63.20:793,63,0	0/0:22,0:22:50.90:0,51,511	0/0:17,0:17:39:0,39,377	0/0:22,0:22:57.08:0,57,562	0/0:26,0:26:69.14:0,69,697	0/0:23,0:23:69.15:0,69,697	0/0:27,0:27:78.16:0,78,788	0/0:29,0:29:75.86:0,76,726	0/0:14,0:14:42.05:0,42,412	0/0:27,0:27:72.04:0,72,706	0/0:28,0:28:69.14:0,69,698	0/0:31,0:31:84.18:0,84,856	0/0:11,0:11:33.07:0,33,336
chr10	65717560	.	GT	G	278.49	PASS	AB=0.903;AC=4;AF=0.071;AN=56;BaseQRankSum=4.167;DP=470;FS=5.763;HRun=10;HaplotypeScore=50.1338;InbreedingCoeff=0.3229;MQ=64.77;MQ0=8;MQRankSum=0.777;QD=4.97;ReadPosRankSum=1.100;VQSLOD=0.3928;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:20,2:21:6.91:7,0,386	0/0:6,0:6:12.03:0,12,133	0/0:11,1:12:1.01:0,1,217	0/0:4,0:4:3.01:0,3,33	0/0:19,0:19:39.06:0,39,417	0/1:14,2:16:15.99:16,0,295	0/0:10,0:10:12.03:0,12,133	0/0:30,0:29:62.82:0,63,748	1/1:3,15:18:41.99:365,42,0	0/0:23,0:23:51.12:0,51,547	0/0:12,0:12:27.06:0,27,290	0/0:31,0:30:72.12:0,72,768	0/0:17,0:16:42.07:0,42,451	0/0:14,0:14:36.02:0,36,372	0/0:29,0:27:63.17:0,63,697	0/0:19,0:19:45.05:0,45,472	0/0:19,2:20:2.04:0,2,479	0/0:26,0:24:51.14:0,51,564	0/0:14,0:16:42.08:0,42,442	0/0:14,0:14:33.04:0,33,365	0/0:7,0:6:15:0,15,152	0/0:6,0:6:15.04:0,15,166	0/0:11,0:11:27.02:0,27,276	0/0:8,0:8:15.03:0,15,157	0/0:12,0:11:27.03:0,27,285	0/0:22,0:22:50.96:0,51,532	0/0:32,0:31:87.20:0,87,942	0/0:12,0:12:23.83:0,24,244
chr10	65722213	.	C	CT	1235.91	PASS	AB=1.000;AC=6;AF=0.107;AN=56;BaseQRankSum=-1.250;DP=556;FS=0.551;HRun=2;HaplotypeScore=59.1145;InbreedingCoeff=0.6176;MQ=72.97;MQ0=0;MQRankSum=-0.542;QD=17.66;ReadPosRankSum=0.953;VQSLOD=3.5808;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:48.09:0,48,543	0/0:5,0:5:15.03:0,15,173	0/1:9,0:9:0.83:1,0,91	0/0:12,0:9:7.36:0,7,95	0/0:29,0:29:80.97:0,81,914	0/0:23,0:23:56.95:0,57,686	0/0:14,0:14:42.03:0,42,421	0/0:28,0:28:75.10:0,75,840	0/0:22,0:22:63.15:0,63,721	1/1:6,15:21:49:668,49,0	1/1:3,15:18:49.92:676,50,0	0/0:20,0:20:57.15:0,57,669	0/0:14,0:14:42.12:0,42,508	0/0:24,0:24:72.19:0,72,855	0/0:22,0:22:63.12:0,63,748	0/1:22,0:22:20:20,0,143	0/0:21,0:21:54.14:0,54,639	0/0:19,0:19:54.15:0,54,652	0/0:28,0:28:72.11:0,72,808	0/0:30,0:30:77.78:0,78,890	0/0:3,0:3:3.01:0,3,37	0/0:16,0:16:45.13:0,45,537	0/0:11,0:11:30.07:0,30,344	0/0:9,0:9:19.25:0,19,261	0/0:25,0:25:72.17:0,72,834	0/0:30,0:30:81.75:0,82,966	0/0:38,0:38:99:0,99,1083	0/0:25,0:25:72.09:0,72,791
chr10	65722215	.	T	TA	647.10	PASS	AB=0.833;AC=7;AF=0.125;AN=56;BaseQRankSum=3.956;DP=549;FS=1.939;HRun=10;HaplotypeScore=60.4769;InbreedingCoeff=0.4321;MQ=72.48;MQ0=0;MQRankSum=-1.251;QD=7.99;ReadPosRankSum=0.205;VQSLOD=1.7109;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:16:37.99:0,38,301	0/0:6,0:6:17.96:0,18,144	0/0:8,0:8:5.42:0,5,24	0/1:12,0:9:1.67:2,0,58	0/0:28,0:29:67.95:0,68,548	0/0:23,1:24:24.88:0,25,402	0/0:13,0:14:20:0,20,154	0/0:27,0:27:56.89:0,57,466	0/0:21,0:21:50.91:0,51,414	1/1:16,1:17:24.57:232,25,0	1/1:19,0:19:0.65:215,1,0	0/0:19,0:19:47.94:0,48,394	0/0:14,0:14:38.95:0,39,320	0/0:25,0:25:62.89:0,63,514	0/0:21,0:21:59.93:0,60,493	0/1:7,16:24:9.26:311,0,9	0/0:21,0:21:53.90:0,54,438	0/0:18,0:18:50.94:0,51,419	0/0:26,0:27:40.39:0,40,442	0/0:31,0:32:70.88:0,71,569	0/0:2,0:2:5.98:0,6,47	0/0:15,0:15:38.95:0,39,320	0/0:11,0:11:23.97:0,24,197	0/1:7,1:9:8.97:9,0,131	0/0:25,0:26:58.94:0,59,474	0/0:28,2:31:38.93:0,39,516	0/0:37,0:37:74.81:0,75,604	0/0:24,0:24:50.90:0,51,419
chr10	65722452	.	C	CT	251.86	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-4.652;DP=629;FS=0.000;HRun=8;HaplotypeScore=61.9259;InbreedingCoeff=0.9181;MQ=71.45;MQ0=1;MQRankSum=0.815;QD=14.82;ReadPosRankSum=1.507;VQSLOD=3.4046;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:84.03:0,84,768	0/0:10,0:10:30.02:0,30,274	0/0:27,0:25:57.43:0,57,509	0/0:16,0:15:6.96:0,7,171	0/0:32,0:32:93.02:0,93,840	0/0:16,0:16:45:0,45,405	0/0:16,0:16:42.02:0,42,384	0/0:35,0:35:71.97:0,72,642	0/0:29,0:29:81.04:0,81,741	0/0:28,0:28:81.04:0,81,741	0/0:25,0:25:68.99:0,69,615	0/0:22,0:22:57.01:0,57,513	0/0:17,0:17:51.02:0,51,462	0/0:23,0:23:57.01:0,57,521	0/0:27,0:27:78.04:0,78,714	0/0:20,0:20:51:0,51,462	0/0:17,0:17:45.02:0,45,412	1/1:2,15:17:30.09:346,30,0	0/0:26,0:26:59.96:0,60,539	0/0:28,0:28:75:0,75,677	0/0:17,0:17:51.02:0,51,461	0/0:17,0:17:51.03:0,51,467	0/0:19,0:19:54.02:0,54,491	0/0:18,0:18:51.02:0,51,467	0/0:25,0:25:72.04:0,72,658	0/0:29,0:29:78.01:0,78,706	0/0:29,0:29:81.04:0,81,741	0/0:11,0:11:29.98:0,30,263
chr10	65724871	.	TACACACACACACACACACACAC	T	4947.19	PASS	AC=30;AF=0.652;AN=46;BaseQRankSum=5.721;DP=444;FS=5.778;HRun=0;HaplotypeScore=232.1694;InbreedingCoeff=0.5823;MQ=66.87;MQ0=11;MQRankSum=-4.194;QD=19.25;ReadPosRankSum=0.790;VQSLOD=3.4003;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:16:24.08:0,24,1708	1/1:7,2:9:6.02:345,6,0	0/0:26,0:15:0.89:0,1,2	./.	0/0:7,0:7:3.01:0,3,256	./.	1/1:13,0:12:3.01:63,3,0	1/1:27,0:25:1.25:3,1,0	1/1:16,0:21:9.03:456,9,0	1/1:21,0:21:3.01:154,3,0	1/1:12,0:13:3.01:64,3,0	1/1:15,0:15:12.02:244,12,0	0/0:11,0:11:31.92:0,32,1987	1/1:10,0:10:3.01:114,3,0	1/1:12,7:21:26.60:1492,27,0	1/1:10,0:16:18.06:895,18,0	./.	1/1:8,0:9:3.01:149,3,0	0/0:13,0:13:0:0,0,0	1/1:12,4:17:6.02:282,6,0	1/1:31,0:30:8.50:81,8,0	1/1:16,5:21:6.02:261,6,0	0/0:15,0:15:20.43:0,20,837	0/0:13,0:14:21.07:0,21,1433	./.	0/0:14,0:14:2.22:0,2,7	1/1:8,4:11:6.02:345,6,0	./.
chr10	65725429	.	CCTT	C	554.04	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.062;DP=609;FS=0.931;HRun=0;HaplotypeScore=85.9327;InbreedingCoeff=0.9065;MQ=73.67;MQ0=0;MQRankSum=0.276;QD=29.16;ReadPosRankSum=0.976;VQSLOD=3.5599;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,108,2232	0/0:4,0:4:12.04:0,12,244	0/0:22,0:22:27.65:0,28,808	0/0:20,0:18:8.01:0,8,606	0/0:30,0:30:81.25:0,81,1698	0/0:24,0:24:69.19:0,69,1397	0/0:24,0:24:72.20:0,72,1446	0/0:38,0:38:99:0,102,2125	1/1:0,19:19:39.13:649,39,0	0/0:28,0:28:78.27:0,78,1716	0/0:15,0:15:42.14:0,42,930	0/0:23,0:23:60.15:0,60,1259	0/0:15,0:15:45.15:0,45,963	0/0:20,0:20:60.16:0,60,1212	0/0:20,0:20:57.18:0,57,1227	0/0:21,0:21:63.19:0,63,1319	0/0:18,0:18:51.12:0,51,1045	0/0:15,0:15:45.15:0,45,976	0/0:28,0:28:78.26:0,78,1665	0/0:25,0:25:75.22:0,75,1530	0/0:22,0:22:63.22:0,63,1393	0/0:22,0:22:66.19:0,66,1346	0/0:18,0:18:54.19:0,54,1184	0/0:16,0:16:45.15:0,45,1004	0/0:31,0:31:87.27:0,87,1854	0/0:17,0:17:48.15:0,48,968	0/0:25,0:25:75.21:0,75,1573	0/0:13,0:13:39.06:0,39,675
chr10	65728106	.	T	TG	12886.62	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-12.237;DP=601;FS=14.887;HRun=5;HaplotypeScore=70.8943;InbreedingCoeff=0.9995;MQ=88.18;MQ0=0;MQRankSum=-2.145;QD=32.96;ReadPosRankSum=2.153;VQSLOD=3.9907;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:90.23:0,90,965	1/1:1,11:12:30.10:395,30,0	0/0:24,0:24:49.04:0,49,456	0/0:35,0:35:39.81:0,40,489	0/0:20,0:20:60.15:0,60,644	1/1:3,26:29:75.24:984,75,0	1/1:3,16:20:45.14:586,45,0	0/0:21,0:21:57.07:0,57,583	0/0:25,0:25:75.19:0,75,805	1/1:1,16:17:48.16:630,48,0	1/1:2,20:22:54.18:710,54,0	1/1:2,31:33:87.28:1144,87,0	0/0:23,0:23:63.16:0,63,676	1/1:1,17:18:45.15:592,45,0	1/1:0,17:17:48.16:632,48,0	1/1:3,18:21:48.16:632,48,0	1/1:9,28:37:75.24:987,75,0	1/1:0,11:11:27.09:355,27,0	1/1:4,16:20:48.12:612,48,0	1/1:0,14:14:39.13:509,39,0	1/1:3,30:33:84.27:1105,84,0	1/1:0,11:11:27.09:354,27,0	0/0:18,0:18:51.13:0,51,547	0/0:13,0:13:36.09:0,36,387	1/1:0,13:13:36.12:474,36,0	1/1:1,28:29:84.25:1086,84,0	1/1:3,13:15:36.12:471,36,0	1/1:0,18:18:48.16:631,48,0
chr10	65733317	.	GGA	G	364.96	PASS	AB=0.865;AC=6;AF=0.130;AN=46;BaseQRankSum=6.157;DP=151;FS=0.000;HRun=0;HaplotypeScore=46.6890;InbreedingCoeff=0.0019;MQ=27.69;MQ0=11;MQRankSum=-1.209;QD=11.77;ReadPosRankSum=2.912;VQSLOD=3.1723;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:2,0:2:3.01:0,3,57	./.	./.	./.	0/0:7,0:7:18.06:0,18,340	0/0:9,0:7:15.05:0,15,280	0/0:5,0:3:5.98:0,6,75	0/0:13,0:6:11.25:0,11,177	0/1:8,0:7:34.72:140,0,35	0/1:8,1:9:99:109,0,113	0/1:5,3:8:43.96:86,0,44	0/0:9,0:7:21.07:0,21,392	0/0:6,0:5:15.05:0,15,281	0/0:9,0:6:17.85:0,18,293	0/0:7,0:5:15.05:0,15,240	0/1:4,1:5:27.74:121,0,28	0/0:1,0:1:3.01:0,3,42	1/1:1,0:1:2.98:22,3,0	0/0:8,0:5:15.05:0,15,280	./.	0/0:2,0:1:3.01:0,3,57	0/0:9,0:8:18.01:0,18,335	0/0:2,0:2:6.02:0,6,111	0/0:3,0:2:3.01:0,3,57	0/0:11,0:10:30.10:0,30,554	0/0:5,0:5:15.05:0,15,276	0/0:5,0:4:9.01:0,9,165	./.
chr10	65733319	.	AGG	A	504.37	PASS	AB=0.706;AC=6;AF=0.125;AN=48;BaseQRankSum=5.974;DP=154;FS=0.000;HRun=3;HaplotypeScore=46.2493;InbreedingCoeff=-0.0663;MQ=27.84;MQ0=11;MQRankSum=-0.905;QD=16.27;ReadPosRankSum=3.189;VQSLOD=0.8894;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:2,0:2:3.01:0,3,54	./.	./.	./.	0/0:7,0:7:18.06:0,18,346	0/0:9,0:7:15.05:0,15,285	0/0:5,0:3:6.02:0,6,92	0/0:13,0:6:11.25:0,11,180	0/1:4,4:7:33.68:243,0,34	0/1:4,5:9:99:125,0,104	0/1:7,1:8:29.63:88,0,30	0/0:9,0:7:21.07:0,21,398	0/0:6,0:5:15.05:0,15,288	0/0:10,0:7:21.03:0,21,336	0/0:7,0:5:14.97:0,15,209	0/1:2,3:5:27.55:152,0,28	0/0:1,0:1:3.01:0,3,42	1/1:1,0:1:0.47:1,0,0	0/0:8,0:5:15.05:0,15,280	./.	0/0:2,0:1:3.01:0,3,58	0/0:9,0:8:18.01:0,18,334	0/0:3,0:3:6.02:0,6,115	0/0:3,0:2:3.01:0,3,58	0/0:11,0:10:30.10:0,30,566	0/0:5,0:5:15.05:0,15,280	0/0:5,0:4:9.01:0,9,168	0/0:2,0:1:3:0,3,26
chr10	65733330	.	G	GAA	390.05	PASS	AB=0.904;AC=8;AF=0.167;AN=48;BaseQRankSum=4.529;DP=171;FS=2.211;HRun=1;HaplotypeScore=67.0598;InbreedingCoeff=0.1509;MQ=29.63;MQ0=13;MQRankSum=-2.572;QD=8.48;ReadPosRankSum=1.147;VQSLOD=0.6256;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,0:2:1.82:5,2,0	./.	./.	./.	0/0:8,0:7:12.04:0,12,184	0/0:10,0:7:15.05:0,15,224	0/0:5,0:3:6.01:0,6,74	0/1:15,0:8:16.41:16,0,217	0/1:7,0:6:38.47:38,0,139	0/1:10,1:11:91.88:172,0,92	0/1:4,3:7:19.85:158,0,20	0/0:9,0:7:18.06:0,18,273	0/0:7,0:6:15.05:0,15,229	0/0:12,0:9:26.55:0,27,336	0/0:7,0:5:9.03:0,9,129	1/1:3,1:4:10.57:123,11,0	0/0:2,0:2:3.01:0,3,33	0/0:1,0:1:2.96:0,3,19	0/0:7,0:5:15.05:0,15,211	./.	0/0:6,0:5:14.20:0,14,157	0/0:8,0:7:12.04:0,12,180	0/0:3,0:3:7.58:0,8,96	0/0:4,0:2:3.48:0,3,47	0/0:13,0:12:32.47:0,32,457	0/0:4,0:4:12.04:0,12,183	0/0:7,0:6:11.83:0,12,150	0/0:4,0:3:8.51:0,9,71
chr10	65733369	.	GAAGTATGT	G	7455.26	PASS	AB=1.000;AC=51;AF=0.911;AN=56;BaseQRankSum=-5.044;DP=264;FS=6.170;HRun=0;HaplotypeScore=126.7576;InbreedingCoeff=0.4303;MQ=48.41;MQ0=0;MQRankSum=-5.157;QD=29.01;ReadPosRankSum=-4.112;VQSLOD=3.3702;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,0:12:32.70:341,33,0	1/1:3,0:3:9:84,9,0	0/0:4,0:2:4.66:0,5,20	0/0:3,0:2:6.02:0,6,85	1/1:8,0:7:2.82:170,3,0	1/1:11,0:11:21.01:254,21,0	1/1:13,0:11:27.04:392,27,0	1/1:13,0:13:8.15:408,8,0	1/1:4,4:7:14.71:367,15,0	1/1:13,0:13:32.76:376,33,0	1/1:7,0:7:15.48:202,15,0	1/1:11,0:9:12.50:183,12,0	1/1:9,0:9:27.09:453,27,0	0/1:15,0:13:6.24:291,0,6	1/1:15,0:13:30.09:316,30,0	1/1:6,0:6:16.68:137,17,0	1/1:9,0:9:3.26:199,3,0	1/1:6,0:6:17.92:249,18,0	1/1:8,0:8:17.71:242,18,0	1/1:11,0:10:24.01:367,24,0	1/1:18,0:17:15.44:408,15,0	1/1:6,0:6:18.01:272,18,0	1/1:3,0:3:8.97:84,9,0	1/1:10,0:9:27.09:482,27,0	1/1:16,0:15:9:334,9,0	1/1:11,0:11:32.99:483,33,0	1/1:7,0:7:13.21:226,13,0	1/1:7,0:6:0.23:133,0,0
chr10	65733372	.	GTAT	G	2279.90	PASS	AB=0.796;AC=43;AF=0.768;AN=56;BaseQRankSum=-3.229;DP=247;FS=47.545;HRun=0;HaplotypeScore=111.5760;InbreedingCoeff=0.0415;MQ=49.64;MQ0=0;MQRankSum=-0.351;QD=9.50;ReadPosRankSum=-3.088;VQSLOD=0.5195;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,2:13:13.12:112,13,0	1/1:3,0:3:6.09:27,6,0	0/0:3,1:2:5.44:0,5,27	0/0:3,0:2:5.99:0,6,59	1/1:6,3:8:8.28:53,8,0	1/1:6,3:9:17.38:98,17,0	1/1:9,4:11:20.12:129,20,0	1/1:5,7:11:10.11:126,10,0	0/1:6,0:6:3.18:72,0,3	1/1:7,2:9:20.10:145,20,0	0/1:4,2:6:5.81:36,0,6	0/1:6,3:7:7.13:47,0,7	1/1:1,8:9:25.64:202,26,0	0/1:10,5:13:35.89:90,0,36	0/1:13,2:13:18.17:64,0,18	0/1:3,1:4:0.92:12,0,1	0/1:6,3:9:22.57:76,0,23	1/1:3,2:5:11.82:103,12,0	1/1:5,3:7:11.72:81,12,0	1/1:7,4:10:17.34:103,17,0	1/1:12,3:15:10.47:134,10,0	1/1:4,3:7:11.09:71,11,0	0/1:2,1:3:11.06:25,0,11	1/1:7,3:9:24.20:263,24,0	1/1:10,4:13:18.72:111,19,0	1/1:8,3:11:21.36:154,21,0	0/1:5,3:8:13.23:43,0,13	1/1:5,2:6:1.85:51,2,0
chr10	65733389	.	GA	G	9551.03	PASS	AB=0.929;AC=54;AF=0.964;AN=56;BaseQRankSum=-2.197;DP=348;FS=1.643;HRun=3;HaplotypeScore=95.5946;InbreedingCoeff=-0.0439;MQ=53.65;MQ0=0;MQRankSum=-2.103;QD=27.45;ReadPosRankSum=1.812;VQSLOD=4.0593;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,13:14:39.10:467,39,0	1/1:0,4:4:9.03:111,9,0	0/1:16,0:12:55.08:204,0,55	0/1:5,1:6:42.94:129,0,43	1/1:0,10:9:24.03:275,24,0	1/1:3,9:11:21.07:258,21,0	1/1:1,13:12:24.35:328,24,0	1/1:1,20:20:54.12:632,54,0	1/1:2,7:7:17.95:202,18,0	1/1:4,11:15:42.53:486,43,0	1/1:1,8:9:24.07:293,24,0	1/1:0,7:5:15.05:184,15,0	1/1:0,10:10:30.09:368,30,0	1/1:1,17:16:39.03:479,39,0	1/1:1,17:16:36.11:432,36,0	1/1:0,11:11:33.10:408,33,0	1/1:1,11:12:30.16:400,30,0	1/1:2,5:7:18.32:199,18,0	1/1:1,10:9:24.08:296,24,0	1/1:0,16:15:39.12:477,39,0	1/1:1,21:21:52.97:622,53,0	1/1:1,8:9:18.06:222,18,0	1/1:2,4:6:9.03:110,9,0	1/1:0,13:12:27.08:329,27,0	1/1:1,15:15:19.15:424,19,0	1/1:0,19:19:57.17:690,57,0	1/1:0,13:13:26.11:302,26,0	1/1:0,9:8:18.06:222,18,0
chr10	65736029	.	TAAAC	T	1208.59	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=3.941;DP=424;FS=18.372;HRun=0;HaplotypeScore=94.5811;InbreedingCoeff=0.9183;MQ=74.08;MQ0=4;MQRankSum=2.192;QD=18.88;ReadPosRankSum=2.091;VQSLOD=2.0265;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:57.06:0,57,998	0/0:1,0:1:3.01:0,3,71	0/0:27,0:17:47.99:0,48,776	0/0:25,0:16:29.22:0,29,491	0/0:18,0:18:51.12:0,51,853	0/0:11,0:10:27.98:0,28,489	0/0:13,0:13:39.05:0,39,645	0/0:20,0:20:54.19:0,54,1014	0/0:14,0:14:39.10:0,39,747	1/1:1,18:19:48.10:611,48,0	1/1:0,20:20:6.02:74,6,0	0/0:17,0:17:50.96:0,51,771	0/0:14,0:14:42.09:0,42,767	0/0:11,0:10:30.04:0,30,470	0/0:12,0:12:33.10:0,33,700	1/1:14,0:15:38.97:443,39,0	0/0:12,0:12:29.99:0,30,526	1/1:10,0:9:17.92:233,18,0	0/0:15,0:13:39.12:0,39,686	0/0:12,0:12:36.02:0,36,647	0/0:15,0:15:35.03:0,35,577	0/0:12,0:12:30.05:0,30,474	0/0:14,0:14:30.10:0,30,610	0/0:16,0:16:45.07:0,45,836	0/0:11,0:11:25.84:0,26,402	0/0:19,0:19:54.16:0,54,996	0/0:20,0:20:54.06:0,54,978	0/0:7,0:7:21.07:0,21,462
chr10	65739447	.	GA	G	1053.93	PASS	AB=0.825;AC=34;AF=0.607;AN=56;BaseQRankSum=1.732;DP=572;FS=2.375;HRun=17;HaplotypeScore=80.4239;InbreedingCoeff=-0.0644;MQ=55.90;MQ0=12;MQRankSum=-1.600;QD=2.17;ReadPosRankSum=3.370;VQSLOD=-0.6448;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:37,3:39:2.17:2,0,183	0/1:7,1:9:11.49:31,0,11	0/1:37,1:12:10.04:10,0,90	0/0:23,0:11:4.58:0,5,63	0/0:20,0:20:2.96:0,3,121	1/1:6,8:15:16.24:81,16,0	0/1:20,3:24:22.58:71,0,23	0/1:17,5:23:59.53:60,0,60	0/1:11,3:14:12.10:25,0,12	1/1:7,0:21:16.39:47,16,0	0/1:5,0:18:9.39:9,0,12	0/1:8,2:10:12.30:38,0,12	0/0:13,0:13:9.62:0,10,136	0/1:17,5:22:9.49:51,0,9	1/1:5,1:8:5.67:31,6,0	1/1:9,0:23:25.20:80,25,0	0/1:30,2:32:8.99:117,0,9	1/1:18,0:30:37.17:104,37,0	0/1:12,9:21:20.40:95,0,20	0/1:8,10:18:19.23:19,0,36	1/1:13,1:13:5.75:33,6,0	1/1:7,7:14:13.42:97,13,0	0/1:14,0:14:0.08:0,0,68	0/0:29,2:31:31.01:0,31,325	0/1:13,0:12:28.49:38,0,28	1/1:16,3:19:0.29:66,0,0	1/1:8,18:26:17.95:100,18,0	1/1:9,1:9:3.21:14,3,0
chr10	65741340	.	CGT	C	500.77	PASS	AB=0.922;AC=27;AF=0.614;AN=44;BaseQRankSum=1.922;DP=423;FS=6.460;HRun=0;HaplotypeScore=66.7015;InbreedingCoeff=0.2093;MQ=58.92;MQ0=22;MQRankSum=0.233;QD=2.08;ReadPosRankSum=0.876;VQSLOD=0.8712;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:6.49:0,6,86	0/0:3,0:2:0:0,0,0	./.	./.	0/0:17,0:17:14.94:0,15,150	1/1:12,0:13:2.84:14,3,0	1/1:14,0:12:2.84:14,3,0	./.	0/1:9,0:10:2.61:9,0,3	./.	0/0:12,0:17:0.69:0,1,16	1/1:9,4:12:4.87:61,5,0	0/1:14,0:14:13.10:13,0,117	1/1:7,2:9:6.01:63,6,0	1/1:12,4:15:6.01:63,6,0	1/1:10,0:13:2.84:14,3,0	1/1:13,3:14:7.09:48,7,0	./.	1/1:10,0:9:3:25,3,0	1/1:10,1:12:8.80:65,9,0	1/1:16,4:19:3.01:31,3,0	0/1:13,2:15:10.45:10,0,38	0/1:13,0:10:4.85:5,0,55	0/1:22,2:22:70.29:70,0,158	0/0:12,0:12:3:0,3,25	0/0:10,0:10:5.98:0,6,58	1/1:18,0:23:20.21:129,20,0	./.
chr10	65744043	.	CCT	C	975.06	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.723;DP=606;FS=2.561;HRun=0;HaplotypeScore=83.7195;InbreedingCoeff=0.9964;MQ=88.63;MQ0=0;MQRankSum=-3.267;QD=33.62;ReadPosRankSum=0.987;VQSLOD=5.8000;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:54.19:0,54,966	0/0:10,0:10:24.08:0,24,432	0/0:26,0:26:72.13:0,72,1141	0/0:26,0:26:58.08:0,58,978	0/0:23,0:23:53.03:0,53,957	0/0:23,0:23:60.21:0,60,1080	0/0:15,0:15:45.15:0,45,811	0/0:41,0:41:99:0,105,1856	1/1:2,27:29:78.22:1070,78,0	0/0:20,0:20:60.21:0,60,1080	0/0:24,0:24:66.23:0,66,1179	0/0:17,0:17:51.16:0,51,873	0/0:24,0:24:72.23:0,72,1264	0/0:21,0:21:54.14:0,54,913	0/0:23,0:23:60.19:0,60,1049	0/0:22,0:22:63.20:0,63,1053	0/0:19,0:19:51.16:0,51,887	0/0:11,0:11:30.10:0,30,540	0/0:19,0:19:45.15:0,45,810	0/0:35,0:35:81.26:0,81,1420	0/0:24,0:24:66.20:0,66,1139	0/0:21,0:21:51.17:0,51,916	0/0:16,0:16:30.10:0,30,540	0/0:17,0:17:45.15:0,45,807	0/0:18,0:18:54.16:0,54,928	0/0:29,0:29:84.25:0,84,1479	0/0:23,0:23:51.17:0,51,901	0/0:10,0:10:30.10:0,30,525
chr10	65744399	.	GA	G	4561.97	PASS	AB=0.719;AC=38;AF=0.679;AN=56;BaseQRankSum=3.685;DP=467;FS=4.933;HRun=13;HaplotypeScore=54.8375;InbreedingCoeff=0.3200;MQ=69.64;MQ0=1;MQRankSum=1.523;QD=12.07;ReadPosRankSum=2.718;VQSLOD=4.8420;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,1:27:44.02:0,44,570	1/1:2,4:6:11.93:88,12,0	0/0:17,0:10:17.97:0,18,157	0/1:15,0:12:5.29:5,0,71	0/1:16,1:18:6.26:6,0,227	0/1:3,14:18:11.56:244,0,12	0/1:8,9:17:16.85:183,0,17	0/1:13,12:27:11.28:218,0,11	1/1:2,9:11:20.82:153,21,0	1/1:4,10:14:1.88:187,2,0	1/1:6,14:20:44.68:328,45,0	1/1:2,10:12:26.84:197,27,0	0/0:18,0:18:39.03:0,39,363	1/1:6,10:16:7.99:194,8,0	0/1:1,7:8:11.28:91,0,11	1/1:2,7:9:17.89:131,18,0	1/1:5,28:33:74.49:547,74,0	0/1:10,4:14:59.79:60,0,94	0/1:9,12:21:66.92:195,0,67	1/1:2,17:19:25.91:325,26,0	1/1:4,6:11:19.90:137,20,0	1/1:4,4:9:13.95:93,14,0	0/0:11,0:12:24.63:0,25,206	0/0:13,1:15:16.98:0,17,308	1/1:6,19:25:10.24:394,10,0	1/1:3,13:17:40.80:290,41,0	1/1:5,17:23:23.57:327,24,0	1/1:4,10:14:0.66:168,1,0
chr10	65746694	.	A	AAAC	1172.70	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-5.751;DP=720;FS=2.927;HRun=0;HaplotypeScore=99.3954;InbreedingCoeff=0.9545;MQ=71.08;MQ0=0;MQRankSum=-0.069;QD=46.91;ReadPosRankSum=0.839;VQSLOD=5.1664;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:72.19:0,72,1058	0/0:17,0:17:48.16:0,48,737	0/0:11,0:11:11.13:0,11,156	0/0:13,0:13:23.75:0,24,308	0/0:37,0:37:99:0,105,1521	0/0:18,0:18:45.14:0,45,652	0/0:14,0:14:39.12:0,39,560	0/0:36,0:36:84.27:0,84,1287	1/1:1,24:25:60.21:1268,60,0	0/0:40,0:40:99:0,105,1572	0/0:34,0:34:87.26:0,87,1275	0/0:28,0:28:72.22:0,72,1063	0/0:24,0:24:63.21:0,63,945	0/0:21,0:21:63.21:0,63,948	0/0:30,0:30:81.26:0,81,1221	0/0:30,0:30:87.28:0,87,1295	0/0:30,0:30:87.30:0,87,1336	0/0:16,0:16:39.12:0,39,577	0/0:22,0:22:48.14:0,48,679	0/0:31,0:31:87.28:0,87,1315	0/0:18,0:18:48.14:0,48,694	0/0:29,0:29:75.25:0,75,1151	0/0:34,0:34:96.30:0,96,1431	0/0:24,0:24:69.22:0,69,1039	0/0:34,0:34:96.32:0,96,1454	0/0:37,0:37:96.30:0,96,1415	0/0:30,0:30:84.26:0,84,1231	0/0:7,0:7:18.05:0,18,255
chr10	65753038	.	A	AGTT	9026.05	PASS	AB=0.607;AC=47;AF=0.870;AN=54;BaseQRankSum=-2.688;DP=163;FS=64.387;HRun=0;HaplotypeScore=44.1818;InbreedingCoeff=0.2001;MQ=59.56;MQ0=1;MQRankSum=-3.375;QD=60.99;ReadPosRankSum=2.290;VQSLOD=1.4648;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,6:6:18.06:442,18,0	1/1:0,4:4:12.04:293,12,0	0/0:6,0:2:5.89:0,6,70	0/0:8,0:5:1.84:0,2,86	1/1:0,12:12:32.65:719,33,0	1/1:0,11:11:33.11:811,33,0	1/1:0,2:2:6.02:145,6,0	0/1:4,6:9:99:342,0,197	1/1:1,5:6:18.06:448,18,0	1/1:0,4:4:12.04:295,12,0	1/1:1,4:5:8.82:219,9,0	1/1:0,7:7:21.07:516,21,0	1/1:1,4:5:12.04:295,12,0	1/1:1,4:5:12.04:295,12,0	./.	1/1:0,4:4:12.04:295,12,0	1/1:2,10:13:27.09:601,27,0	0/1:2,6:8:23.54:351,0,24	0/1:2,3:5:96.85:206,0,97	1/1:0,4:4:12.04:295,12,0	1/1:0,3:3:9.03:187,9,0	1/1:0,1:1:3.01:74,3,0	1/1:0,1:1:3.01:74,3,0	1/1:0,2:2:3.01:72,3,0	1/1:0,7:7:21.07:512,21,0	1/1:1,8:9:24.08:588,24,0	1/1:0,10:13:36.12:879,36,0	1/1:0,1:1:3.01:74,3,0
chr10	65754318	.	T	TA	7608.12	PASS	AB=0.719;AC=41;AF=0.732;AN=56;BaseQRankSum=-2.899;DP=540;FS=3.809;HRun=11;HaplotypeScore=92.5529;InbreedingCoeff=0.7249;MQ=65.55;MQ0=0;MQRankSum=-3.105;QD=17.82;ReadPosRankSum=-0.264;VQSLOD=5.3703;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:68.56:0,69,517	1/1:2,10:12:4.29:221,4,0	0/1:16,0:13:0.61:1,0,81	0/0:16,0:14:6.07:0,6,43	0/0:20,0:20:53.79:0,54,416	1/1:7,9:16:6.82:251,7,0	1/1:4,19:23:47.99:472,48,0	1/1:13,21:35:65.94:640,66,0	1/1:6,11:17:12.40:284,12,0	1/1:14,20:34:44.38:591,44,0	1/1:7,12:19:27.37:352,27,0	1/1:7,11:18:29.93:279,30,0	0/0:14,0:13:32.77:0,33,250	1/1:6,16:22:38.96:375,39,0	1/1:3,20:23:51.57:519,52,0	1/1:2,13:15:36.01:352,36,0	1/1:2,19:21:42.07:421,42,0	1/1:4,16:20:21.86:403,22,0	1/1:6,16:22:7.65:428,8,0	1/1:3,11:14:33.37:308,33,0	1/1:6,17:23:39.08:395,39,0	1/1:7,10:17:7.71:253,8,0	0/0:17,0:17:41.75:0,42,316	0/0:16,0:16:41.78:0,42,320	0/1:3,12:15:10.47:251,0,10	1/1:6,11:17:16.30:338,16,0	1/1:8,10:17:33.04:326,33,0	0/1:3,6:9:2.23:152,0,2
chr10	65754340	.	TGC	T	1655.58	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=3.977;DP=438;FS=5.022;HRun=0;HaplotypeScore=99.6161;InbreedingCoeff=0.8818;MQ=57.05;MQ0=7;MQRankSum=-3.262;QD=16.23;ReadPosRankSum=-1.487;VQSLOD=3.2349;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:24:41.53:0,42,400	0/0:8,0:8:16.32:0,16,104	0/0:15,0:6:17.57:0,18,132	0/0:14,0:6:11.77:0,12,83	0/0:15,0:15:38.78:0,39,418	0/0:17,0:16:16.49:0,16,189	0/0:18,0:16:29.75:0,30,220	1/1:20,7:27:80.29:668,80,0	0/0:10,0:9:17.65:0,18,124	1/1:21,3:24:65.26:504,65,0	1/1:11,3:13:20.98:175,21,0	0/0:15,0:14:17.28:0,17,166	0/0:16,0:15:25.96:0,26,230	0/0:17,0:17:28.64:0,29,207	0/0:20,0:20:31.27:0,31,225	1/1:9,2:11:26.73:193,27,0	0/0:14,0:13:28.78:0,29,183	1/1:13,2:15:38.73:287,39,0	0/0:28,0:28:62.58:0,63,412	0/0:13,0:12:23.84:0,24,180	0/0:20,0:19:21.45:0,21,199	0/0:11,0:11:20.92:0,21,163	0/0:15,0:15:21.58:0,22,177	0/0:15,0:15:34.65:0,35,343	0/0:9,0:9:14.94:0,15,116	0/0:14,0:12:27.66:0,28,184	0/1:11,0:10:1.53:2,0,69	0/0:6,0:6:5.41:0,5,64
chr10	65754342	.	CGTGTGTGTGTGTGT	C	2091.57	PASS	AB=1.000;AC=25;AF=0.568;AN=44;BaseQRankSum=5.082;DP=425;FS=14.853;HRun=0;HaplotypeScore=176.9289;InbreedingCoeff=0.4408;MQ=55.03;MQ0=9;MQRankSum=-3.769;QD=10.25;ReadPosRankSum=0.440;VQSLOD=2.0206;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:25:9.47:0,9,198	1/1:7,0:8:3.01:98,3,0	./.	0/0:14,0:6:0.47:0,0,1	0/0:15,0:15:21.07:0,21,1110	1/1:12,3:15:9.03:330,9,0	1/1:16,0:14:1.25:3,1,0	0/0:27,0:27:2.23:0,2,5	0/1:10,0:9:78.17:78,0,84	./.	./.	1/1:11,2:13:9.03:330,9,0	0/0:15,0:14:15.05:0,15,685	1/1:15,0:16:3.01:98,3,0	1/1:13,2:16:9.03:254,9,0	1/1:11,0:11:6.02:195,6,0	0/0:15,0:14:3.45:0,3,22	1/1:17,0:15:2.85:190,3,0	1/1:26,1:27:3.68:153,4,0	./.	0/1:20,0:19:34.06:34,0,103	1/1:7,1:9:6.01:65,6,0	0/0:14,0:14:6.02:0,6,109	0/0:17,0:16:24.08:0,24,1143	./.	0/1:13,0:11:0.29:0,0,0	1/1:7,1:10:11.94:409,12,0	./.
chr10	65754744	.	C	CTCATTCAT	3469.82	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-3.423;DP=641;FS=1.427;HRun=0;HaplotypeScore=161.7760;InbreedingCoeff=0.9121;MQ=74.22;MQ0=1;MQRankSum=-5.461;QD=30.98;ReadPosRankSum=-2.796;VQSLOD=3.0911;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:31:63.18:0,63,1431	0/0:13,0:13:27.09:0,27,666	0/0:28,0:24:8.86:0,9,132	0/0:26,0:22:2.37:0,2,8	0/0:25,0:25:51.15:0,51,1148	0/0:17,0:17:27.09:0,27,613	0/0:19,0:19:30.10:0,30,651	1/1:31,0:34:15.03:228,15,0	0/0:18,0:18:33.10:0,33,708	1/1:18,5:23:18.06:717,18,0	1/1:15,9:24:24.08:945,24,0	0/0:25,0:25:51.17:0,51,1112	0/0:24,0:24:39.13:0,39,968	0/0:20,0:20:39.13:0,39,983	0/0:26,0:26:54.10:0,54,1250	1/1:16,8:24:36.12:1362,36,0	0/0:22,0:22:36.08:0,36,851	1/1:5,0:6:9:218,9,0	0/0:19,0:20:17.99:0,18,434	0/0:12,0:12:15.04:0,15,299	0/0:43,0:43:78.22:0,78,1799	0/0:13,0:13:12.04:0,12,276	0/0:19,0:19:30.09:0,30,681	0/0:24,0:24:39.13:0,39,956	0/0:23,0:23:42.12:0,42,1005	0/0:24,0:24:60.18:0,60,1382	0/0:42,0:41:63.15:0,63,1386	0/0:15,0:15:15.05:0,15,378
chr10	65754825	.	T	TCTGTAGA	33026.48	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=-9.069;DP=539;FS=4.504;HRun=0;HaplotypeScore=120.7789;InbreedingCoeff=0.9924;MQ=62.30;MQ0=1;MQRankSum=-15.668;QD=87.60;ReadPosRankSum=0.633;VQSLOD=5.7246;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:75.21:0,75,1855	1/1:2,5:8:15.05:596,15,0	0/0:28,0:24:65.35:0,65,1496	0/0:27,0:23:60.21:0,60,1480	0/0:19,0:19:54.17:0,54,1329	1/1:6,13:20:48.16:1828,48,0	1/1:3,16:21:57.20:2187,57,0	1/1:9,21:34:69.22:2521,69,0	1/1:5,13:19:51.14:1912,51,0	1/1:3,9:14:39.12:1425,39,0	1/1:5,13:19:36.12:1433,36,0	1/1:5,10:17:36.12:1350,36,0	0/0:19,0:19:54.19:0,54,1332	1/1:6,17:24:66.18:2411,66,0	1/1:4,22:26:66.23:2588,66,0	1/1:2,8:12:27.09:1069,27,0	1/1:7,10:18:39.10:1433,39,0	1/1:4,4:9:15.05:583,15,0	1/1:8,10:20:54.16:1954,54,0	1/1:3,9:13:33.11:1221,33,0	1/1:6,9:17:33.11:1254,33,0	1/1:3,10:14:24.08:956,24,0	0/0:15,0:14:42.14:0,42,1091	0/0:25,0:25:72.21:0,72,1755	1/1:6,7:15:24.08:956,24,0	1/1:5,12:21:57.20:1904,57,0	1/1:7,19:25:69.24:2610,69,0	1/1:2,7:9:21.07:838,21,0
chr10	65755811	.	C	CT	672.87	PASS	AB=0.913;AC=8;AF=0.143;AN=56;BaseQRankSum=-0.406;DP=618;FS=6.953;HRun=14;HaplotypeScore=81.1500;InbreedingCoeff=0.6183;MQ=72.27;MQ0=1;MQRankSum=0.481;QD=5.47;ReadPosRankSum=-3.548;VQSLOD=1.5859;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:27:34:34,0,203	0/0:14,0:14:27.04:0,27,173	0/0:23,0:17:18.38:0,18,103	0/0:15,0:11:5.70:0,6,38	0/0:30,0:31:40.64:0,41,286	0/0:29,1:30:41.53:0,42,396	0/0:20,0:21:37.36:0,37,235	0/0:20,0:22:33.24:0,33,202	0/0:22,0:24:48.25:0,48,300	1/1:10,17:28:35.78:291,36,0	1/1:10,14:25:11.77:202,12,0	0/1:14,4:19:21.26:21,0,128	0/0:13,0:14:19.71:0,20,121	0/0:19,0:20:34.63:0,35,219	0/0:26,0:25:35.14:0,35,228	1/1:8,16:24:17.98:274,18,0	0/0:30,0:31:41.06:0,41,268	0/0:6,0:8:9.94:0,10,50	0/0:25,1:28:13.77:0,14,177	0/0:22,1:24:16.89:0,17,228	0/0:16,0:18:21.59:0,22,126	0/0:17,0:18:29.39:0,29,192	0/0:21,0:22:37.24:0,37,236	0/0:19,0:21:9.39:0,9,148	0/0:19,0:20:49.25:0,49,313	0/0:21,0:21:35.33:0,35,230	0/0:31,2:33:35.59:0,36,357	0/0:9,0:9:5.72:0,6,84
chr10	65756286	.	AT	A	397.14	PASS	AB=0.818;AC=8;AF=0.143;AN=56;BaseQRankSum=-0.008;DP=546;FS=1.845;HRun=16;HaplotypeScore=74.8378;InbreedingCoeff=0.2939;MQ=73.09;MQ0=0;MQRankSum=-0.224;QD=3.34;ReadPosRankSum=3.093;VQSLOD=0.1857;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:12,4:16:11.40:0,11,173	0/0:1,0:5:8.52:0,9,42	0/0:25,0:16:13.44:0,13,80	0/1:19,0:14:17.49:33,0,17	0/0:27,3:32:32.93:0,33,455	0/0:7,0:20:20.04:0,20,110	0/0:6,0:13:10.75:0,11,89	0/1:16,6:24:23.75:81,0,24	0/0:13,1:15:14.08:0,14,244	1/1:9,8:17:1.17:118,1,0	0/1:10,7:20:16.71:114,0,17	0/0:8,1:18:11.17:0,11,151	0/0:18,0:20:47.18:0,47,353	0/0:7,0:21:20.55:0,21,134	0/0:5,1:17:17:0,17,191	1/1:4,10:15:28.39:167,28,0	0/0:6,0:24:25.74:0,26,134	0/0:21,0:22:32.56:0,33,238	0/0:13,0:18:28.50:0,28,157	0/0:6,1:25:35.66:0,36,246	0/0:5,0:20:24.11:0,24,125	0/0:8,0:17:26.06:0,26,157	0/1:19,4:24:21.26:21,0,251	0/0:12,0:12:20.97:0,21,174	0/0:9,0:24:22.85:0,23,119	0/0:10,1:28:47.99:0,48,330	0/0:8,0:25:30.06:0,30,165	0/0:4,0:10:14.60:0,15,92
chr10	65757225	.	CCCT	C	450.20	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.118;DP=446;FS=2.926;HRun=0;HaplotypeScore=71.6197;InbreedingCoeff=0.9785;MQ=73.75;MQ0=1;MQRankSum=0.385;QD=7.15;ReadPosRankSum=3.495;VQSLOD=1.8268;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:33.01:0,33,448	0/0:8,0:8:21.04:0,21,361	0/0:12,0:11:29.78:0,30,352	0/0:10,0:10:26.97:0,27,298	0/0:18,0:18:51.06:0,51,754	0/0:11,0:11:30.02:0,30,490	0/0:19,0:19:57.11:0,57,949	0/0:21,0:21:47.85:0,48,438	0/0:10,0:10:15.02:0,15,196	1/1:22,0:22:16.89:205,17,0	1/1:18,2:20:29.73:208,30,0	0/0:19,0:19:57.12:0,57,998	0/0:17,0:17:51.09:0,51,823	0/0:10,0:10:30.09:0,30,621	0/0:25,0:25:72.18:0,72,1327	1/1:19,2:21:13.45:176,13,0	0/0:17,0:17:51.13:0,51,1024	0/0:17,0:17:38.15:0,38,371	0/0:9,0:9:24.05:0,24,355	0/0:22,0:22:56.92:0,57,770	0/0:12,0:12:36.05:0,36,504	0/0:16,0:16:45.08:0,45,677	0/0:19,0:19:51.09:0,51,746	0/0:13,0:13:39.13:0,39,867	0/0:12,0:12:35.59:0,36,383	0/0:21,0:21:60.09:0,60,947	0/0:24,0:24:66.20:0,66,1323	0/0:9,0:9:27.08:0,27,504
chr10	65757226	.	CCT	C	1347.53	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=6.354;DP=504;FS=13.013;HRun=0;HaplotypeScore=66.0834;InbreedingCoeff=0.9952;MQ=72.27;MQ0=1;MQRankSum=-0.940;QD=22.84;ReadPosRankSum=4.448;VQSLOD=3.1176;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:39.03:0,39,452	0/0:7,0:7:21.02:0,21,285	0/0:12,0:11:24.55:0,25,251	0/0:10,0:10:23.37:0,23,205	0/0:21,0:21:53.97:0,54,657	0/0:17,0:17:48.06:0,48,573	0/0:20,0:20:57.01:0,57,780	0/0:23,0:23:47.85:0,48,405	0/0:13,0:13:24.03:0,24,249	1/1:2,18:20:51.04:589,51,0	1/1:2,18:20:32.89:355,33,0	0/0:21,0:21:54.09:0,54,782	0/0:18,0:18:51.01:0,51,671	0/0:14,0:14:42.10:0,42,602	0/0:27,0:27:72.17:0,72,1084	1/1:3,16:19:42.10:547,42,0	0/0:18,0:18:54.11:0,54,834	0/0:18,0:18:27.85:0,28,229	0/0:10,0:10:26.93:0,27,305	0/0:29,0:29:65.93:0,66,746	0/0:17,0:17:42.27:0,42,480	0/0:18,0:18:50.73:0,51,604	0/0:22,0:22:54.06:0,54,642	0/0:16,0:16:48.12:0,48,759	0/0:16,0:16:36.52:0,37,385	0/0:26,0:26:71.92:0,72,896	0/0:25,0:25:65.96:0,66,1032	0/0:11,0:11:30.02:0,30,395
chr10	65757313	.	AT	A	262.14	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.177;DP=583;FS=2.100;HRun=9;HaplotypeScore=58.0302;InbreedingCoeff=0.9445;MQ=72.95;MQ0=0;MQRankSum=-0.011;QD=20.16;ReadPosRankSum=-0.610;VQSLOD=3.7811;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,111,1236	0/0:12,0:12:33.10:0,33,381	0/0:20,1:21:9.93:0,10,342	0/0:12,0:12:18.02:0,18,177	0/0:29,0:29:54.15:0,54,855	0/0:21,0:20:60.15:0,60,670	0/0:16,0:16:36.09:0,36,404	0/0:24,0:24:60.15:0,60,674	1/1:0,13:13:39.02:357,39,0	0/0:24,0:24:66.20:0,66,762	0/0:24,0:24:60.09:0,60,675	0/0:15,0:15:42.11:0,42,474	0/0:25,0:25:63.19:0,63,727	0/0:11,0:11:30.09:0,30,346	0/0:21,0:21:54.15:0,54,613	0/0:20,0:20:57.17:0,57,658	0/0:16,0:16:42.12:0,42,485	0/0:18,0:17:45.09:0,45,495	0/0:18,0:18:45.13:0,45,511	0/0:26,0:26:75.20:0,75,845	0/0:12,0:12:30.08:0,30,337	0/0:26,0:26:78.23:0,78,900	0/0:26,0:26:66.19:0,66,753	0/0:10,0:10:27.08:0,27,312	0/0:28,0:28:84.22:0,84,944	0/0:20,0:20:57.16:0,57,650	0/0:29,0:29:87.23:0,87,982	0/0:28,0:28:72.21:0,72,831
chr10	65761662	.	G	GT	4925.63	PASS	AB=0.742;AC=29;AF=0.518;AN=56;BaseQRankSum=-10.184;DP=565;FS=0.370;HRun=11;HaplotypeScore=68.6839;InbreedingCoeff=0.6145;MQ=79.97;MQ0=0;MQRankSum=0.063;QD=14.66;ReadPosRankSum=3.516;VQSLOD=5.4355;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:36:86.40:0,86,652	1/1:4,5:9:12.02:122,12,0	0/1:26,1:19:15.89:16,0,99	0/1:23,0:19:7.27:7,0,50	0/0:21,0:22:34.96:0,35,388	1/1:5,16:21:45.09:457,45,0	0/1:5,13:19:16.86:349,0,17	0/0:22,0:22:43.01:0,43,321	0/0:11,0:11:25.85:0,26,183	0/0:20,0:20:41.79:0,42,322	0/0:23,0:23:47.77:0,48,367	0/1:7,15:22:7.17:240,0,7	0/0:24,0:24:65.67:0,66,499	1/1:4,12:17:29.89:288,30,0	1/1:1,15:17:41.92:410,42,0	0/0:14,0:14:32.06:0,32,237	1/1:5,23:29:27.01:515,27,0	0/0:17,0:17:32.82:0,33,252	1/1:2,12:14:12.85:306,13,0	1/1:5,12:18:35.19:324,35,0	1/1:3,10:13:20.26:190,20,0	1/1:4,15:19:15.79:330,16,0	0/0:20,0:20:5.35:0,5,215	0/0:18,0:20:36.91:0,37,263	1/1:6,18:24:7.64:441,8,0	0/1:10,17:27:33.06:418,0,33	1/1:3,15:20:12.23:279,12,0	1/1:6,9:16:6.66:234,7,0
chr10	65763597	.	A	AT	885.78	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-8.572;DP=532;FS=0.769;HRun=6;HaplotypeScore=46.5114;InbreedingCoeff=0.9369;MQ=68.50;MQ0=0;MQRankSum=-1.055;QD=32.81;ReadPosRankSum=-3.970;VQSLOD=2.0234;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:51.11:0,51,520	0/0:7,0:7:21.03:0,21,208	0/0:9,0:9:24.04:0,24,236	0/0:7,0:7:9.01:0,9,88	0/0:38,0:38:99:0,108,1094	0/0:28,0:28:72.08:0,72,714	0/0:13,0:13:36.08:0,36,367	1/1:1,26:27:78.25:981,78,0	0/0:13,0:13:24.05:0,24,245	0/0:21,0:21:54.12:0,54,551	0/0:23,0:23:63.14:0,63,642	0/0:18,0:18:42.09:0,42,428	0/0:16,0:16:39.06:0,39,389	0/0:16,0:16:42.09:0,42,428	0/0:19,0:19:42.09:0,42,428	0/0:26,0:26:63.14:0,63,643	0/0:28,0:28:72.08:0,72,714	0/0:28,0:28:75.13:0,75,754	0/0:14,0:14:36.08:0,36,367	0/0:19,0:19:54.12:0,54,551	0/0:14,0:14:36.05:0,36,359	0/0:14,0:14:36.08:0,36,367	0/0:22,0:22:60.12:0,60,605	0/0:12,0:12:33.08:0,33,337	0/0:25,0:25:66.08:0,66,660	0/0:19,0:19:51.11:0,51,520	0/0:23,0:23:66.14:0,66,665	0/0:12,0:12:36.02:0,36,349
chr10	65768892	.	ACCT	A	409.50	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.324;DP=514;FS=1.123;HRun=0;HaplotypeScore=79.0809;InbreedingCoeff=0.7958;MQ=77.56;MQ0=4;MQRankSum=-1.302;QD=31.50;ReadPosRankSum=0.601;VQSLOD=3.4029;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:68.76:0,69,1014	0/0:5,0:7:15.04:0,15,225	0/0:31,0:19:44.96:0,45,641	0/0:23,0:17:29.39:0,29,370	0/0:23,0:23:53.09:0,53,785	0/0:18,0:18:19.12:0,19,222	0/0:39,0:39:83.81:0,84,1076	0/0:22,0:22:57.05:0,57,779	0/0:14,0:14:20.24:0,20,255	0/0:17,0:17:38.90:0,39,351	0/0:23,0:23:50.96:0,51,461	0/0:18,0:18:29.18:0,29,312	0/0:18,0:18:48.11:0,48,864	0/0:17,0:17:27.02:0,27,316	0/0:18,0:18:20.70:0,21,235	0/0:17,0:17:45:0,45,444	0/0:23,0:23:30.03:0,30,391	1/1:1,12:13:30.10:504,30,0	0/0:15,0:15:36.78:0,37,464	0/0:5,0:6:9:0,9,98	0/0:25,0:24:47.60:0,48,577	0/0:8,0:8:11.99:0,12,138	0/0:16,0:16:39.10:0,39,670	0/0:26,0:26:65.65:0,66,1007	0/0:17,0:17:32.97:0,33,414	0/0:9,0:9:24.01:0,24,279	0/0:13,0:12:39.10:0,39,595	0/0:9,0:9:4.97:0,5,58
chr10	65768895	.	T	TC	1167.22	PASS	AB=0.755;AC=24;AF=0.429;AN=56;BaseQRankSum=-3.603;DP=511;FS=4.585;HRun=10;HaplotypeScore=66.2746;InbreedingCoeff=0.2505;MQ=73.80;MQ0=5;MQRankSum=-2.822;QD=4.24;ReadPosRankSum=-4.977;VQSLOD=-0.5315;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:28.68:0,29,221	1/1:6,0:6:11.87:88,12,0	0/0:31,0:16:5.02:0,5,150	0/0:24,0:17:1.06:0,1,99	0/0:23,0:23:29.88:0,30,240	0/1:10,7:18:15.16:53,0,15	0/1:21,14:37:41.19:171,0,41	0/1:20,0:21:1.02:1,0,76	0/1:6,0:14:12.79:53,0,13	0/0:4,0:17:23.51:0,24,82	0/0:6,0:24:27.65:0,28,83	0/1:12,8:20:18.02:27,0,18	0/0:17,0:17:29.28:0,29,211	1/1:8,9:19:8.94:79,9,0	1/1:5,8:15:5.96:63,6,0	0/0:5,0:18:16.46:0,16,53	0/1:8,15:23:10.02:84,0,10	0/0:13,0:13:21.89:0,22,69	0/1:7,8:15:3.83:114,0,4	1/1:6,0:6:3.48:33,3,0	1/1:20,4:25:33.61:305,34,0	1/1:2,3:5:3.01:32,3,0	0/0:16,0:16:20.69:0,21,151	0/0:24,0:26:37.75:0,38,289	0/1:10,4:16:4.43:61,0,4	0/1:11,0:12:0.84:27,0,1	0/1:11,0:12:31.30:88,0,31	1/1:3,6:9:6.02:64,6,0
chr10	65771738	.	T	TAG	4404.90	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-12.475;DP=670;FS=14.826;HRun=0;HaplotypeScore=75.1926;InbreedingCoeff=0.9993;MQ=86.59;MQ0=0;MQRankSum=-2.130;QD=49.49;ReadPosRankSum=1.552;VQSLOD=4.2119;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,111,1588	0/0:8,0:8:24.08:0,24,353	0/0:23,0:23:63.16:0,63,865	0/0:22,0:22:63.14:0,63,858	0/0:31,0:31:87.28:0,87,1255	0/0:19,0:19:54.16:0,54,768	0/0:18,0:18:48.16:0,48,707	0/0:40,0:40:99:0,117,1682	0/0:25,0:25:69.22:0,69,994	1/1:2,27:29:81.26:1464,81,0	1/1:0,19:19:54.19:1011,54,0	0/0:25,0:25:75.25:0,75,1103	0/0:23,0:23:69.23:0,69,1015	0/0:18,0:18:54.18:0,54,795	0/0:26,0:26:78.25:0,78,1128	1/1:1,25:26:68.97:1292,69,0	0/0:30,0:30:90.27:0,90,1282	1/1:3,12:15:36.08:638,36,0	0/0:35,0:35:99:0,102,1451	0/0:19,0:19:54.18:0,54,795	0/0:29,0:29:81.25:0,81,1170	0/0:21,0:21:63.21:0,63,922	0/0:22,0:22:66.22:0,66,970	0/0:22,0:22:66.11:0,66,897	0/0:19,0:19:48.15:0,48,689	0/0:30,1:31:37.10:0,37,1269	0/0:25,0:25:72.21:0,72,1020	0/0:11,0:11:33.11:0,33,485
chr10	65772412	.	AT	A	568.75	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.329;DP=671;FS=2.605;HRun=3;HaplotypeScore=71.4708;InbreedingCoeff=0.9747;MQ=74.00;MQ0=0;MQRankSum=-0.897;QD=24.73;ReadPosRankSum=0.463;VQSLOD=2.8823;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,136,1791	0/0:9,0:9:24.08:0,24,342	0/0:22,0:20:36.03:0,36,370	0/0:13,0:12:13.29:0,13,132	0/0:28,0:28:66.78:0,67,987	0/0:13,0:13:39.13:0,39,559	0/0:11,0:11:33.10:0,33,454	0/0:35,0:35:97.80:0,98,1235	0/0:17,0:17:51.15:0,51,697	0/0:28,0:28:81:0,81,1039	0/0:16,0:16:33.51:0,34,450	0/0:27,0:27:75.22:0,75,1018	0/0:26,0:26:73.38:0,73,961	0/0:27,0:27:74.95:0,75,989	0/0:24,0:24:57.48:0,57,824	0/0:17,0:17:49.39:0,49,671	0/0:25,0:24:75.20:0,75,1018	1/1:0,23:23:54.17:664,54,0	0/0:20,0:20:54.14:0,54,695	0/0:29,0:29:82.11:0,82,1088	0/0:30,0:30:69.88:0,70,954	0/0:27,0:27:73.38:0,73,1000	0/0:21,0:21:57.16:0,57,761	0/0:29,0:29:75.69:0,76,957	0/0:19,0:19:48.13:0,48,641	0/0:36,0:36:99:0,105,1371	0/0:26,0:26:73.07:0,73,944	0/0:25,0:25:70.10:0,70,956
chr10	65775366	.	T	TAC	1606.48	PASS	AB=0.868;AC=19;AF=0.365;AN=52;BaseQRankSum=4.817;DP=693;FS=39.435;HRun=0;HaplotypeScore=176.3913;InbreedingCoeff=0.3316;MQ=53.88;MQ0=15;MQRankSum=-1.622;QD=5.48;ReadPosRankSum=1.868;VQSLOD=1.4120;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:38:66.49:0,66,845	0/1:8,0:11:2.32:39,0,2	0/0:31,0:10:3.01:0,3,34	./.	0/0:17,0:18:17.57:0,18,165	0/1:11,0:15:1.92:53,0,2	0/0:15,0:31:2.90:0,3,16	0/1:22,7:28:8.13:232,0,8	./.	0/0:22,0:23:41.41:0,41,400	0/0:10,0:9:15.04:0,15,168	0/1:27,3:31:25.85:170,0,26	0/0:26,0:28:55.50:0,55,578	0/0:8,0:22:6.48:0,6,33	1/1:20,1:23:5.35:99,5,0	0/0:27,0:27:42.11:0,42,469	1/1:19,0:27:5.81:243,6,0	0/0:25,0:26:4.03:0,4,14	1/1:16,0:16:17.61:170,18,0	1/1:13,1:14:2.60:46,3,0	1/1:49,1:52:10.71:115,11,0	0/0:14,0:17:2.80:0,3,14	0/0:11,0:12:20.89:0,21,224	0/0:62,0:63:99:0,131,1462	0/1:21,1:23:19.15:101,0,19	1/1:15,1:17:12.43:185,12,0	0/1:16,0:17:15.08:158,0,15	0/1:16,0:17:6.92:162,0,7
chr10	65775375	.	ACACACACACACACACGCACGCACG	A	4343.02	PASS	AB=1.000;AC=30;AF=0.577;AN=52;BaseQRankSum=8.064;DP=666;FS=35.072;HRun=0;HaplotypeScore=345.6241;InbreedingCoeff=0.7083;MQ=50.49;MQ0=22;MQRankSum=-6.137;QD=12.70;ReadPosRankSum=0.052;VQSLOD=1.9640;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:67.19:0,67,2842	0/1:10,0:10:2.32:54,0,2	0/0:26,0:6:3.01:0,3,34	./.	0/0:14,0:14:20.71:0,21,942	1/1:14,0:14:11.22:194,11,0	0/0:31,0:30:2.90:0,3,16	0/1:25,0:22:8.20:232,0,8	./.	0/0:28,0:26:62.70:0,63,2456	0/0:11,0:10:14.97:0,15,889	1/1:28,0:28:26.53:560,27,0	0/0:29,0:29:67.57:0,68,3543	1/1:21,0:20:10.28:315,10,0	1/1:16,0:16:13.40:115,13,0	0/0:26,0:25:53.95:0,54,2971	1/1:24,0:24:31.94:463,32,0	1/1:6,24:30:0.49:187,0,0	1/1:16,0:15:17.15:158,17,0	1/1:14,0:14:3.01:47,3,0	1/1:51,0:50:8.89:112,9,0	1/1:28,0:27:3.01:91,3,0	0/0:10,0:10:21.96:0,22,1332	0/0:68,0:68:99:0,149,7813	1/1:20,0:20:20.64:418,21,0	1/1:13,0:12:22.58:303,23,0	1/1:16,0:16:24.44:598,24,0	1/1:16,0:15:20.22:494,20,0
chr10	65775383	.	ACACACACGCACGCACG	A	7573.26	PASS	AB=1.000;AC=32;AF=0.615;AN=52;BaseQRankSum=4.331;DP=628;FS=60.050;HRun=0;HaplotypeScore=242.8578;InbreedingCoeff=0.7173;MQ=49.24;MQ0=24;MQRankSum=-4.939;QD=21.89;ReadPosRankSum=0.060;VQSLOD=2.1200;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:90.18:0,90,3393	1/1:9,1:10:4.83:104,5,0	0/0:20,0:4:6.02:0,6,88	./.	0/0:17,0:17:30.05:0,30,1064	1/1:13,0:13:12.01:247,12,0	1/1:28,0:27:4.17:20,4,0	0/1:21,0:17:67.67:68,0,94	./.	0/0:27,0:25:66.11:0,66,2221	0/0:12,0:11:15.04:0,15,678	1/1:27,0:27:41.37:969,41,0	0/0:26,0:25:69.03:0,69,3003	1/1:20,0:19:11.87:395,12,0	1/1:14,0:14:16.33:271,16,0	0/0:23,0:22:57:0,57,2184	1/1:23,0:23:39.06:984,39,0	0/1:27,0:27:34.23:148,0,34	1/1:14,0:13:26.10:456,26,0	1/1:3,14:17:2.84:9,3,0	1/1:45,0:44:24.73:396,25,0	1/1:9,16:24:3.01:129,3,0	0/0:13,0:13:27.56:0,28,1491	0/0:70,0:69:99:0,168,7731	1/1:19,1:20:33.09:804,33,0	1/1:13,0:11:30.08:705,30,0	1/1:14,0:14:36.47:942,36,0	1/1:15,0:14:36.10:926,36,0
chr10	65775389	.	ACGCACGCACG	A	6020.33	PASS	AB=0.914;AC=27;AF=0.519;AN=52;BaseQRankSum=6.210;DP=630;FS=25.187;HRun=0;HaplotypeScore=214.0391;InbreedingCoeff=0.5005;MQ=47.18;MQ0=21;MQRankSum=-5.082;QD=17.55;ReadPosRankSum=-3.142;VQSLOD=1.8977;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:96.67:0,97,3138	0/1:6,1:7:7.93:116,0,8	0/0:11,0:3:6.02:0,6,88	./.	0/0:19,0:19:35.91:0,36,862	1/1:13,1:14:2.17:195,2,0	1/1:23,1:23:6.98:92,7,0	0/1:17,0:14:37.02:37,0,152	./.	0/0:27,0:24:55.50:0,55,1435	0/0:10,0:9:18.04:0,18,493	1/1:27,6:32:2.88:568,3,0	0/0:28,0:27:12.27:0,12,2337	0/1:21,4:24:6.23:357,0,6	0/1:12,1:13:17.22:187,0,17	0/0:23,0:22:59.98:0,60,1412	1/1:20,4:24:42.40:632,42,0	0/1:26,0:26:14.53:128,0,15	1/1:15,0:14:32.64:423,33,0	0/0:16,1:17:2.80:0,3,21	1/1:48,0:48:28.46:464,28,0	1/1:20,3:22:2.87:83,3,0	0/0:14,0:14:30.57:0,31,1223	0/0:66,0:65:99:0,180,6515	1/1:17,3:20:38.04:710,38,0	1/1:15,1:14:27.58:628,28,0	1/1:10,4:15:39.45:728,39,0	1/1:14,4:17:15.51:673,16,0
chr10	65775399	.	GCA	G	116.31	PASS	AB=0.988;AC=12;AF=0.222;AN=54;BaseQRankSum=6.636;DP=612;FS=13.655;HRun=0;HaplotypeScore=179.2854;InbreedingCoeff=-0.0727;MQ=45.78;MQ0=28;MQRankSum=-5.198;QD=0.48;ReadPosRankSum=3.731;VQSLOD=2.0470;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:32,4:36:84.38:84,0,698	0/0:8,0:8:6.46:0,6,29	0/0:12,0:2:3.01:0,3,44	0/0:20,0:1:3.01:0,3,44	0/0:16,1:17:30.01:0,30,451	0/1:18,0:18:6.83:7,0,19	0/0:28,0:27:12.04:0,12,98	0/0:14,0:8:8.96:0,9,75	./.	0/0:31,0:25:29.20:0,29,588	0/0:9,0:9:18.52:0,19,261	0/1:35,0:33:28.42:28,0,51	0/0:24,1:24:46.52:0,47,762	0/1:26,0:25:19.60:20,0,59	0/0:15,0:15:3.44:0,3,47	0/0:19,0:18:45.14:0,45,677	0/1:24,0:24:15.69:16,0,16	1/1:26,0:26:2.80:13,3,0	0/0:14,0:14:7.29:0,7,43	0/0:16,0:16:3:0,3,25	0/0:47,0:43:2.97:0,3,21	1/1:23,0:22:2.76:13,3,0	0/0:16,0:16:36.08:0,36,497	0/0:58,4:61:11.82:0,12,2102	0/1:20,0:19:21.64:22,0,48	0/0:17,0:15:6.21:0,6,91	0/1:17,0:17:23.89:24,0,52	0/1:15,0:14:26.82:27,0,44
chr10	65775405	.	ACACACACACACG	A	2069.59	PASS	AB=0.980;AC=14;AF=0.259;AN=54;BaseQRankSum=10.348;DP=594;FS=3.431;HRun=0;HaplotypeScore=239.4861;InbreedingCoeff=-0.1650;MQ=46.25;MQ0=27;MQRankSum=-4.511;QD=8.05;ReadPosRankSum=3.633;VQSLOD=2.4837;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:85.44:0,85,2692	0/1:10,0:9:57.63:58,0,95	0/0:13,0:3:8.96:0,9,204	0/0:20,0:1:3.01:0,3,131	0/0:19,0:19:36.12:0,36,1616	0/1:19,1:20:99:99,0,109	0/1:29,0:28:0.40:0,0,234	0/0:13,0:8:20.99:0,21,468	./.	0/0:30,0:25:71.50:0,72,1964	0/0:11,0:10:21.07:0,21,730	0/1:34,1:33:99:303,0,147	0/0:23,0:21:59.69:0,60,2607	0/1:21,1:21:99:265,0,102	0/0:13,0:13:14.74:0,15,120	0/0:20,0:19:49.88:0,50,2358	0/1:21,0:21:6.17:195,0,6	0/1:26,0:26:56.36:56,0,91	1/1:7,0:7:9.51:63,10,0	0/0:17,0:17:5.80:0,6,61	0/0:46,0:41:1.32:0,1,255	0/1:24,0:23:44.01:75,0,44	0/0:17,0:17:39.61:0,40,1582	0/0:60,0:59:99:0,169,7059	0/1:19,0:18:39.38:265,0,39	0/1:16,0:15:99:156,0,139	0/1:12,2:14:93.19:336,0,93	0/1:14,0:13:13.22:348,0,13
chr10	65775407	.	ACACACACACG	A	1993.08	PASS	AB=0.908;AC=15;AF=0.278;AN=54;BaseQRankSum=10.131;DP=606;FS=7.725;HRun=0;HaplotypeScore=229.9317;InbreedingCoeff=-0.2126;MQ=47.69;MQ0=28;MQRankSum=-4.996;QD=6.76;ReadPosRankSum=3.223;VQSLOD=1.5170;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:80.62:0,81,2243	0/1:9,1:9:53.92:54,0,81	0/1:13,0:4:3.90:4,0,181	0/0:18,0:1:3.01:0,3,120	0/0:18,0:18:36.12:0,36,1436	0/1:19,0:19:73.74:88,0,74	0/0:30,0:29:6.41:0,6,211	0/0:14,0:9:21.04:0,21,470	./.	0/0:30,0:25:71.11:0,71,1680	0/0:12,0:11:24.01:0,24,647	0/1:30,5:33:99:316,0,116	0/0:23,0:21:59.42:0,59,2290	0/1:20,3:22:74.06:250,0,74	0/0:14,1:15:14.77:0,15,127	0/0:18,0:18:49.41:0,49,2096	0/1:18,4:22:5.99:172,0,6	0/1:27,0:27:63:63,0,64	1/1:7,0:7:6.24:55,6,0	0/0:16,1:17:3.30:0,3,48	0/1:49,0:44:5.31:5,0,109	0/1:22,3:24:19.16:74,0,19	0/0:19,0:18:42.62:0,43,1474	0/0:61,0:60:99:0,169,6296	0/1:16,3:18:33.62:265,0,34	0/1:15,1:15:99:163,0,151	0/1:12,2:14:97.56:309,0,98	0/1:11,4:14:29.48:326,0,29
chr10	65775425	.	GCA	G	554.45	PASS	AB=0.925;AC=8;AF=0.143;AN=56;BaseQRankSum=2.082;DP=614;FS=2.570;HRun=0;HaplotypeScore=150.9930;InbreedingCoeff=0.3656;MQ=55.70;MQ0=21;MQRankSum=1.421;QD=5.90;ReadPosRankSum=0.769;VQSLOD=3.5063;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,1:30:32.05:0,32,1001	0/0:7,0:6:12:0,12,135	0/0:32,0:21:45.01:0,45,644	0/0:24,0:11:25.54:0,26,321	0/0:18,0:18:42.13:0,42,650	0/1:11,1:12:14.76:15,0,200	0/0:28,0:27:60.06:0,60,774	0/0:23,0:20:57.19:0,57,870	0/0:18,0:18:18.32:0,18,118	1/1:16,10:20:22.07:393,22,0	1/1:5,8:12:20.17:252,20,0	0/0:31,0:29:48.49:0,48,495	0/0:20,0:19:48.16:0,48,786	0/0:21,0:20:1.24:0,1,383	0/0:16,0:16:32.96:0,33,378	0/0:17,0:17:48.16:0,48,777	0/0:25,1:25:3.65:0,4,426	0/0:29,0:26:18.06:0,18,262	0/1:7,1:8:13.13:13,0,142	0/0:20,0:20:20.90:0,21,189	0/0:43,0:39:50.92:0,51,549	0/0:26,0:25:24.78:0,25,219	0/1:14,1:14:1.08:1,0,476	0/0:48,0:47:99:0,105,1654	0/0:18,0:17:4.79:0,5,241	0/1:19,1:20:18.76:19,0,444	0/0:16,0:16:40.90:0,41,416	0/0:9,0:9:14.20:0,14,99
chr10	65776792	.	AC	A	8276.62	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=8.456;DP=641;FS=11.223;HRun=9;HaplotypeScore=94.7837;InbreedingCoeff=0.9707;MQ=72.18;MQ0=14;MQRankSum=-2.375;QD=20.74;ReadPosRankSum=5.122;VQSLOD=4.4943;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:84.21:0,84,950	1/1:0,5:5:15.01:137,15,0	0/0:53,0:26:44.18:0,44,552	0/0:36,0:28:50.20:0,50,511	0/0:17,0:17:48.14:0,48,548	1/1:1,16:17:44.87:392,45,0	1/1:6,28:29:62.83:547,63,0	1/1:7,18:23:41.99:384,42,0	1/1:6,22:27:66:596,66,0	0/0:6,0:9:11.67:0,12,77	0/0:9,0:9:12.29:0,12,101	1/1:4,24:28:74.96:675,75,0	0/0:27,0:27:75.21:0,75,856	1/1:2,21:21:63.03:575,63,0	1/1:3,28:30:81.04:741,81,0	0/0:5,0:23:19.72:0,20,160	1/1:2,27:28:74.92:667,75,0	1/1:5,23:26:63.03:576,63,0	1/1:10,21:27:56.44:465,56,0	1/1:1,17:17:38.95:347,39,0	1/1:3,28:32:79.96:700,80,0	1/1:2,5:7:17.96:155,18,0	0/0:12,0:12:33.06:0,33,366	0/0:23,0:23:57.13:0,57,639	1/1:5,15:18:42.02:384,42,0	1/1:3,20:22:56.83:497,57,0	1/1:2,15:16:42.02:384,42,0	1/1:0,2:2:6:55,6,0
chr10	65778695	.	C	CCT	813	PASS	AB=0.938;AC=37;AF=0.804;AN=46;BaseQRankSum=1.815;DP=623;FS=27.562;HRun=0;HaplotypeScore=107.5193;InbreedingCoeff=0.1016;MQ=61.45;MQ0=7;MQRankSum=-2.181;QD=1.57;ReadPosRankSum=-1.754;VQSLOD=0.0168;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:23,4:29:8.13:38,0,8	./.	./.	./.	./.	1/1:29,0:28:3:26,3,0	1/1:28,0:28:0.47:1,0,0	1/1:29,0:28:1.25:3,1,0	1/1:24,0:24:9:93,9,0	1/1:28,0:28:7.38:49,7,0	1/1:22,0:22:2.99:25,3,0	0/1:14,0:13:0:0,0,0	0/0:14,0:13:3.01:0,3,32	0/1:9,0:8:0:0,0,0	1/1:23,0:23:5.99:49,6,0	1/1:20,0:20:3.46:24,3,0	0/1:29,0:28:2.13:46,0,2	0/1:21,0:21:14.95:86,0,15	1/1:17,0:17:2.60:10,3,0	1/1:17,0:17:3:26,3,0	1/1:32,0:30:5.99:50,6,0	0/1:26,0:26:0:0,0,0	./.	0/1:18,13:32:27.86:76,0,28	1/1:26,0:23:9:92,9,0	1/1:28,0:28:19.41:109,19,0	1/1:22,0:22:9.43:69,9,0	1/1:14,0:14:5.97:44,6,0
chr10	65779723	.	G	GCAGCAATCAAATA	869.21	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-3.844;DP=469;FS=0.000;HRun=0;HaplotypeScore=164.7273;InbreedingCoeff=0.7851;MQ=96.17;MQ0=0;MQRankSum=-3.749;QD=62.09;ReadPosRankSum=1.570;VQSLOD=3.0737;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:92.84:0,93,3123	0/0:7,0:7:18.06:0,18,644	0/0:23,0:23:53.81:0,54,1299	0/0:22,0:22:48.16:0,48,1459	0/0:13,0:13:24.08:0,24,852	0/0:18,0:18:39.13:0,39,1361	0/0:27,0:27:66.22:0,66,2329	0/0:19,0:19:45.12:0,45,985	1/1:5,5:14:15.05:957,15,0	0/0:11,0:11:27.09:0,27,955	0/0:9,0:9:18.06:0,18,666	0/0:24,0:24:66.08:0,66,2057	0/0:8,0:8:18.06:0,18,684	0/0:17,0:17:48.15:0,48,1613	0/0:15,0:15:45.05:0,45,1455	0/0:11,0:11:30.09:0,30,1051	0/0:33,0:33:81.28:0,81,2868	0/0:21,0:21:51.17:0,51,1658	0/0:17,0:17:39.12:0,39,1074	0/0:5,0:5:12.03:0,12,367	0/0:27,0:27:69.22:0,69,2405	0/0:11,0:11:33.11:0,33,1145	0/0:9,0:9:21.07:0,21,798	0/0:35,0:35:99:0,102,3599	0/0:14,0:14:27.09:0,27,960	0/0:10,0:10:21.07:0,21,714	0/0:9,0:9:21.06:0,21,709	0/0:1,0:1:3.01:0,3,114
chr10	65781168	.	TA	T	618.31	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-0.400;DP=681;FS=7.703;HRun=2;HaplotypeScore=91.4553;InbreedingCoeff=0.9887;MQ=81.34;MQ0=0;MQRankSum=-2.183;QD=30.92;ReadPosRankSum=0.543;VQSLOD=2.7375;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,147,2308	0/0:8,0:8:24.08:0,24,382	0/0:18,1:19:31.21:0,31,727	0/0:16,0:16:27.49:0,27,610	0/0:28,0:28:84.26:0,84,1314	0/0:23,0:23:69.22:0,69,1075	0/0:28,0:28:84.29:0,84,1334	0/0:26,0:26:78.27:0,78,1241	1/1:0,20:20:51.17:713,51,0	0/0:20,0:20:57.19:0,57,908	0/0:23,0:23:69.24:0,69,1098	0/0:20,0:20:60.20:0,60,952	0/0:25,0:25:75.26:0,75,1189	0/0:28,0:28:84.28:0,84,1313	0/0:23,0:23:69.21:0,69,1074	0/0:19,0:19:57.19:0,57,911	0/0:39,0:39:99:0,117,1839	0/0:36,0:36:99:0,108,1726	0/0:28,0:28:84.27:0,84,1297	0/0:22,0:22:66.21:0,66,1027	0/0:44,0:44:99:0,132,2058	0/0:15,0:15:45.15:0,45,717	0/0:23,0:23:69.22:0,69,1074	0/0:25,0:25:75.26:0,75,1194	0/0:14,0:14:42.14:0,42,667	0/0:36,0:36:99:0,105,1676	0/0:16,0:16:48.16:0,48,752	0/0:6,0:6:18.04:0,18,263
chr10	65782000	.	ACCC	A	15227.03	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=16.034;DP=606;FS=0.000;HRun=3;HaplotypeScore=92.5951;InbreedingCoeff=0.9897;MQ=74.72;MQ0=0;MQRankSum=-1.248;QD=46.28;ReadPosRankSum=4.479;VQSLOD=4.2183;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:56:99:0,169,3957	1/1:0,7:7:18.06:334,18,0	0/0:9,0:9:27.08:0,27,583	0/0:16,1:17:11.63:0,12,801	0/0:15,0:15:45.10:0,45,1054	1/1:0,32:32:87.30:1584,87,0	1/1:0,33:33:75.26:1377,75,0	0/0:28,0:28:84.28:0,84,2003	0/0:20,0:20:60.16:0,60,1327	0/0:20,0:20:60.21:0,60,1457	0/0:20,0:20:54.15:0,54,1186	1/1:0,14:14:42.14:779,42,0	0/0:22,0:22:66.19:0,66,1498	1/1:0,21:21:57.19:1044,57,0	1/1:0,27:27:78.26:1375,78,0	0/0:26,0:26:78.26:0,78,1875	1/1:0,25:25:47.73:889,48,0	0/0:11,0:11:33.08:0,33,760	1/1:0,22:22:66.22:1178,66,0	1/1:0,14:14:30.10:541,30,0	1/1:0,25:25:63.21:1118,63,0	1/1:0,22:22:51.17:930,51,0	0/0:23,0:23:69.24:0,69,1700	0/0:10,0:10:30.10:0,30,733	1/1:0,21:21:48.16:891,48,0	1/1:1,29:30:13.34:1484,13,0	1/1:1,29:30:75.26:1383,75,0	1/1:0,6:6:18.06:319,18,0
chr10	65783366	.	AG	A	1526.19	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=7.368;DP=655;FS=11.127;HRun=8;HaplotypeScore=66.2263;InbreedingCoeff=0.9986;MQ=77.00;MQ0=0;MQRankSum=-0.204;QD=18.61;ReadPosRankSum=0.746;VQSLOD=2.5605;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:40:99:0,99,1146	0/0:9,0:9:24.07:0,24,288	0/0:21,0:20:38.49:0,38,378	0/0:23,0:21:41.55:0,42,431	0/0:18,0:18:51.14:0,51,600	0/0:21,0:21:60.18:0,60,724	0/0:22,0:22:54.17:0,54,652	1/1:13,27:40:72.08:684,72,0	1/1:2,21:23:54.08:521,54,0	0/0:26,0:26:57.17:0,57,679	0/0:10,0:10:27.06:0,27,304	0/0:18,0:18:39.11:0,39,461	0/0:17,0:17:48.08:0,48,530	0/0:23,0:23:66.19:0,66,786	0/0:28,1:29:58.28:0,58,964	0/0:24,0:24:66.20:0,66,797	0/0:45,0:45:99:0,105,1316	1/1:3,16:19:48.08:464,48,0	0/0:14,0:14:33.07:0,33,376	0/0:20,0:20:54.16:0,54,640	0/0:29,0:29:78.19:0,78,914	0/0:21,0:21:60.18:0,60,724	0/0:20,0:20:57.17:0,57,687	0/0:31,0:31:68.72:0,69,832	0/0:27,0:27:75.18:0,75,858	0/0:27,1:28:49.26:0,49,877	0/0:24,0:24:57.16:0,57,675	0/0:13,0:13:33.10:0,33,399
chr10	65786349	.	AT	A	5594.16	PASS	AB=0.598;AC=34;AF=0.607;AN=56;BaseQRankSum=5.937;DP=499;FS=1.286;HRun=11;HaplotypeScore=57.4482;InbreedingCoeff=0.8169;MQ=66.68;MQ0=3;MQRankSum=-1.279;QD=18.22;ReadPosRankSum=-0.047;VQSLOD=5.6467;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,1:24:41.53:0,42,643	1/1:2,6:8:17.97:148,18,0	0/0:23,0:11:6.49:0,6,65	0/0:15,0:5:8.85:0,9,78	0/0:30,2:32:34.89:0,35,770	1/1:3,12:15:29.96:246,30,0	1/1:2,14:16:41.95:345,42,0	1/1:8,28:36:77.86:635,78,0	1/1:2,12:14:32.96:271,33,0	0/0:24,0:23:48.12:0,48,511	0/0:18,2:20:4.81:0,5,435	0/1:3,10:13:2.02:192,0,2	0/0:10,0:10:18.93:0,19,194	1/1:3,12:15:35.32:279,35,0	1/1:2,6:8:17.98:148,18,0	0/0:14,0:14:36.09:0,36,384	1/1:4,20:24:53.88:437,54,0	1/1:1,21:21:56.85:457,57,0	1/1:3,14:18:44.84:359,45,0	1/1:5,15:20:6.95:264,7,0	1/1:0,8:8:20.98:172,21,0	1/1:2,5:7:14.91:117,15,0	0/0:11,0:11:30.08:0,30,320	0/0:19,0:19:51.06:0,51,529	1/1:3,17:20:44.94:369,45,0	1/1:3,22:25:59.88:486,60,0	1/1:3,23:26:68.90:566,69,0	0/1:5,7:12:41.55:102,0,42
chr10	65786605	.	G	GT	3028.84	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-9.576;DP=684;FS=2.183;HRun=1;HaplotypeScore=74.4890;InbreedingCoeff=0.9862;MQ=81.65;MQ0=0;MQRankSum=-0.631;QD=39.34;ReadPosRankSum=2.064;VQSLOD=4.4469;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:78.21:0,78,993	0/0:4,0:4:12.04:0,12,156	0/0:30,0:30:78.19:0,78,917	0/0:24,0:24:66.15:0,66,759	0/0:24,0:24:72.23:0,72,934	0/0:29,0:29:78.24:0,78,997	0/0:31,0:31:90.24:0,90,1135	0/0:30,0:30:87.28:0,87,1126	0/0:23,0:23:69.22:0,69,884	1/1:2,35:37:99:1554,105,0	1/1:0,14:14:39.13:585,39,0	0/0:31,0:31:93.25:0,93,1186	0/0:20,0:20:60.17:0,60,762	0/0:26,0:26:73.08:0,73,917	0/0:29,0:29:78.25:0,78,1011	1/1:0,26:26:68.91:1033,69,0	0/0:34,0:34:99:0,99,1239	0/0:14,0:14:39.13:0,39,506	0/0:17,0:17:51.11:0,51,628	0/0:13,0:13:33.11:0,33,428	0/0:53,0:53:99:0,156,2011	0/0:20,0:20:60.18:0,60,764	0/0:19,0:19:54.18:0,54,701	0/0:29,0:29:81.25:0,81,1036	0/0:23,0:23:66.14:0,66,820	0/0:30,0:30:87.27:0,87,1117	0/0:21,0:20:63.20:0,63,804	0/0:6,0:6:18.06:0,18,234
chr10	65786902	.	ATTTC	A	5721.93	PASS	AB=1.000;AC=30;AF=0.536;AN=56;BaseQRankSum=11.925;DP=564;FS=1.217;HRun=0;HaplotypeScore=130.2377;InbreedingCoeff=0.8271;MQ=63.40;MQ0=4;MQRankSum=-3.160;QD=19.07;ReadPosRankSum=0.472;VQSLOD=4.2868;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,105,1840	1/1:9,2:11:18.47:181,18,0	0/0:18,0:14:7.20:0,7,183	0/1:17,0:11:36.85:37,0,151	0/0:22,0:22:53.66:0,54,831	1/1:6,12:18:24.02:332,24,0	1/1:19,5:24:35.87:464,36,0	0/0:32,0:32:75.84:0,76,906	0/0:19,0:18:24.04:0,24,332	0/0:31,0:29:66.53:0,67,968	0/0:7,0:7:18.03:0,18,279	1/1:17,3:20:41.93:440,42,0	0/0:19,0:19:27.53:0,28,455	1/1:18,1:19:31.43:311,31,0	1/1:20,5:25:70.90:792,71,0	0/0:24,0:24:30.19:0,30,757	1/1:16,8:23:39.07:561,39,0	0/0:16,0:16:27.05:0,27,459	1/1:23,3:26:51.05:530,51,0	1/1:4,9:13:20.87:223,21,0	1/1:25,1:26:30.72:281,31,0	1/1:15,3:18:26.85:249,27,0	0/0:24,0:24:57.15:0,57,1008	0/0:11,0:11:24.04:0,24,414	1/1:10,4:14:27.34:294,27,0	0/1:20,0:20:18.59:300,0,19	1/1:17,5:22:52.61:652,53,0	1/1:2,1:3:5.97:76,6,0
chr10	65786914	.	CTTTCT	C	3424.48	PASS	AB=0.956;AC=19;AF=0.339;AN=56;BaseQRankSum=13.927;DP=589;FS=0.734;HRun=0;HaplotypeScore=142.4095;InbreedingCoeff=-0.0717;MQ=57.54;MQ0=9;MQRankSum=-1.019;QD=11.30;ReadPosRankSum=3.285;VQSLOD=2.3132;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:48:99:0,127,2428	1/1:9,0:9:1.85:116,2,0	0/0:17,0:11:10.24:0,10,247	0/1:18,0:10:26.89:27,0,180	0/0:22,0:22:41.32:0,41,1030	0/1:18,1:21:23.61:208,0,24	0/1:18,0:18:22.50:249,0,23	0/0:37,0:36:83.80:0,84,1099	0/0:16,0:14:27.35:0,27,415	0/0:31,0:29:78.83:0,79,1228	0/0:13,0:13:22.69:0,23,358	0/1:17,0:18:44.11:293,0,44	0/0:19,0:19:42.19:0,42,664	0/1:17,0:17:5.68:185,0,6	0/1:33,0:33:86.35:429,0,86	0/0:27,0:26:39:0,39,983	0/1:22,0:23:18.68:293,0,19	0/0:17,0:16:25.78:0,26,569	1/1:22,0:22:4.01:359,4,0	0/1:14,1:17:3.57:145,0,4	1/1:20,0:20:6.87:177,7,0	0/1:17,0:18:28.09:187,0,28	0/0:22,0:23:62.60:0,63,1264	0/0:14,0:14:36.53:0,37,614	0/1:13,1:14:28.25:152,0,28	0/1:20,1:21:94.83:243,0,95	0/1:25,1:25:28.12:336,0,28	0/1:7,0:7:19.42:26,0,19
chr10	65786915	.	TTTC	T	4927.82	PASS	AB=0.979;AC=24;AF=0.429;AN=56;BaseQRankSum=11.650;DP=588;FS=6.642;HRun=0;HaplotypeScore=115.7183;InbreedingCoeff=0.4669;MQ=57.53;MQ0=9;MQRankSum=-1.977;QD=16.32;ReadPosRankSum=-0.498;VQSLOD=4.2386;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:48:99:0,101,1616	1/1:9,0:9:20.96:181,21,0	0/0:17,0:11:10.93:0,11,203	0/1:18,0:10:20.71:21,0,120	0/0:21,0:21:57.26:0,57,710	0/1:20,1:21:2.98:260,0,3	1/1:18,1:19:22.26:380,22,0	0/0:37,0:36:17.16:0,17,709	0/0:16,0:14:0.63:0,1,225	0/0:32,0:30:52.83:0,53,784	0/0:13,0:13:4.35:0,4,205	0/1:18,0:18:2.39:342,0,2	0/0:19,0:19:12.53:0,13,405	1/1:17,0:17:39.96:340,40,0	0/1:33,0:33:14.90:616,0,15	0/0:27,0:26:33:0,33,606	1/1:24,0:23:24.10:388,24,0	0/0:16,0:15:13.89:0,14,326	1/1:21,1:22:39.52:506,40,0	1/1:17,0:17:21.99:203,22,0	1/1:19,0:19:32.70:310,33,0	0/1:17,0:17:7.67:205,0,8	0/0:23,0:23:62.36:0,62,862	0/0:15,0:15:38.74:0,39,424	0/1:14,0:14:0.46:245,0,0	0/1:21,0:21:26.89:318,0,27	1/1:25,1:25:27.45:538,27,0	0/1:6,1:7:7.69:76,0,8
chr10	65786916	.	TTC	T	4480.61	PASS	AB=0.974;AC=26;AF=0.464;AN=56;BaseQRankSum=12.296;DP=586;FS=7.966;HRun=0;HaplotypeScore=106.3067;InbreedingCoeff=0.2782;MQ=57.25;MQ0=10;MQRankSum=-2.587;QD=12.88;ReadPosRankSum=-1.266;VQSLOD=4.0157;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:49:95.84:0,96,1337	1/1:9,0:9:23.91:194,24,0	0/0:17,0:11:4.54:0,5,179	0/1:18,0:10:24.04:24,0,89	0/0:21,0:21:44.14:0,44,552	0/1:20,1:21:13.84:209,0,14	1/1:19,0:19:21.22:364,21,0	0/1:33,3:35:8.33:8,0,604	0/0:16,0:14:16.68:0,17,200	0/0:31,0:29:17.65:0,18,597	0/1:11,2:13:23.57:24,0,143	0/1:18,0:18:19.80:319,0,20	0/0:19,0:19:27.76:0,28,337	1/1:17,0:17:35.62:313,36,0	0/1:34,0:34:66.25:550,0,66	0/0:27,1:27:32.41:0,32,460	1/1:24,0:23:18.83:325,19,0	0/0:15,1:15:13.44:0,13,221	1/1:23,0:22:44.97:471,45,0	1/1:17,0:17:23.66:174,24,0	1/1:19,0:19:29.76:288,30,0	0/1:16,0:16:26.42:192,0,26	0/0:24,0:24:44.81:0,45,648	0/0:15,0:15:38.97:0,39,390	0/1:14,0:14:11.66:222,0,12	0/1:20,0:20:28.45:303,0,28	1/1:23,0:22:19.96:444,20,0	0/1:7,0:7:11.91:56,0,12
chr10	65786917	.	TC	T	4275.61	PASS	AB=0.985;AC=26;AF=0.464;AN=56;BaseQRankSum=11.389;DP=597;FS=4.498;HRun=1;HaplotypeScore=99.0241;InbreedingCoeff=0.2857;MQ=56.98;MQ0=10;MQRankSum=-7.144;QD=12.15;ReadPosRankSum=-2.451;VQSLOD=2.6235;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:53:61.89:0,62,1039	1/1:9,0:9:25.44:193,25,0	0/0:16,1:11:4.04:0,4,153	0/1:18,0:10:20.17:20,0,74	0/0:23,0:23:36.45:0,36,440	0/1:21,0:21:4.69:169,0,5	1/1:19,1:20:47.23:396,47,0	0/1:33,2:34:14.86:15,0,521	0/0:16,0:14:16.74:0,17,144	0/0:30,1:29:33.50:0,34,472	0/1:12,1:13:26.53:27,0,90	0/1:18,0:18:21.90:299,0,22	0/0:19,0:19:12.70:0,13,243	1/1:18,0:18:36.03:298,36,0	0/1:32,1:33:67.64:505,0,68	0/0:30,0:29:28.11:0,28,313	1/1:22,1:22:24.39:275,24,0	0/0:15,0:14:11.50:0,12,133	1/1:22,0:21:52.88:460,53,0	1/1:17,0:17:30.48:195,30,0	1/1:20,1:21:37.38:299,37,0	0/1:16,0:16:14.72:188,0,15	0/0:24,0:24:37.56:0,38,467	0/0:15,0:15:38.58:0,39,324	0/1:15,0:15:13.79:200,0,14	0/1:22,0:22:17.56:299,0,18	1/1:22,2:23:22.77:384,23,0	0/1:7,0:7:11.84:55,0,12
chr10	65786918	.	C	CT	806.28	PASS	AB=0.961;AC=20;AF=0.357;AN=56;BaseQRankSum=-4.301;DP=615;FS=2.503;HRun=15;HaplotypeScore=120.9146;InbreedingCoeff=0.2492;MQ=56.76;MQ0=10;MQRankSum=0.704;QD=2.65;ReadPosRankSum=-2.939;VQSLOD=0.1245;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:55:11.88:0,12,334	0/1:9,0:9:5.05:13,0,5	0/0:16,0:11:5.77:0,6,35	0/0:16,0:10:8.64:0,9,47	0/1:20,0:23:13.60:14,0,123	0/0:21,0:21:4.81:0,5,74	0/0:21,0:21:23.68:0,24,111	0/1:33,1:34:3.18:60,0,3	1/1:9,8:16:8.63:96,9,0	1/1:25,9:33:14.86:179,15,0	0/1:10,3:13:2.21:72,0,2	0/0:19,0:19:18.06:0,18,88	0/0:14,5:20:1.14:0,1,105	1/1:18,1:19:2.75:47,3,0	0/0:33,1:34:18.23:0,18,178	1/1:12,15:29:7.86:181,8,0	0/0:24,0:22:30.86:0,31,129	1/1:2,11:13:26.66:204,27,0	0/1:21,0:20:22.27:22,0,26	0/1:16,2:18:13.16:13,0,21	1/1:22,0:23:1.08:23,1,0	0/0:13,0:15:14.50:0,15,64	0/1:23,0:24:29.75:30,0,141	0/0:12,3:15:1.05:0,1,118	0/0:16,0:16:15.61:0,16,75	0/1:22,0:22:21.88:22,0,58	0/0:22,1:24:10.78:0,11,116	0/0:9,0:9:3.86:0,4,27
chr10	65787017	.	A	AT	10591.19	PASS	AB=0.926;AC=31;AF=0.554;AN=56;BaseQRankSum=3.936;DP=582;FS=4.687;HRun=5;HaplotypeScore=76.3310;InbreedingCoeff=0.9272;MQ=74.08;MQ0=0;MQRankSum=-2.089;QD=32.39;ReadPosRankSum=1.005;VQSLOD=5.4940;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,117,1257	1/1:1,10:11:30.10:395,30,0	0/0:17,0:17:48.11:0,48,511	0/0:14,0:13:27.03:0,27,278	0/0:25,0:25:72.18:0,72,774	1/1:0,20:20:57.19:750,57,0	1/1:2,22:24:57.19:750,57,0	0/0:19,0:19:51.13:0,51,548	0/0:21,0:21:63.13:0,63,666	0/0:32,0:32:90.23:0,90,967	0/0:18,0:18:48.12:0,48,516	1/1:1,17:18:51.17:671,51,0	0/0:16,0:16:45.11:0,45,483	1/1:4,18:22:60.19:775,60,0	1/1:3,33:36:93.30:1224,93,0	0/0:16,0:16:48.12:0,48,516	1/1:0,29:29:84.27:1104,84,0	0/1:23,2:25:15.80:16,0,549	1/1:5,19:24:57.17:735,57,0	1/1:0,19:19:54.13:691,54,0	1/1:0,18:18:51.17:671,51,0	1/1:2,24:26:66.21:868,66,0	0/0:18,0:18:54.14:0,54,580	0/0:17,0:17:48.12:0,48,516	1/1:0,16:16:45.15:592,45,0	1/1:1,19:20:57.16:733,57,0	1/1:1,11:12:33.09:419,33,0	1/1:2,5:7:15.05:197,15,0
chr10	65788614	.	AG	A	8152.98	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=16.151;DP=670;FS=5.180;HRun=5;HaplotypeScore=167.1865;InbreedingCoeff=0.9981;MQ=78.37;MQ0=1;MQRankSum=-10.024;QD=24.05;ReadPosRankSum=3.196;VQSLOD=2.9394;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,105,1436	1/1:7,4:11:21.01:218,21,0	0/0:24,0:23:67.10:0,67,827	0/0:32,0:31:77.27:0,77,1044	0/0:25,0:25:72.23:0,72,966	1/1:15,8:23:24.06:267,24,0	1/1:0,23:23:57.15:634,57,0	0/0:32,0:32:96.32:0,96,1285	0/0:35,0:35:90.29:0,90,1190	0/0:19,0:19:51.16:0,51,684	0/0:9,0:9:27.07:0,27,351	1/1:4,20:24:60.14:655,60,0	0/0:16,0:16:48.16:0,48,656	1/1:20,8:28:29.98:321,30,0	1/1:6,25:31:81.20:890,81,0	0/0:22,0:22:66.21:0,66,887	1/1:2,25:27:75.20:834,75,0	0/0:26,0:26:54.11:0,54,669	1/1:3,18:21:60.15:660,60,0	1/1:2,11:13:24.06:267,24,0	1/1:8,24:32:66.07:714,66,0	1/1:18,5:23:42.53:464,43,0	0/0:13,0:13:33.09:0,33,434	0/0:37,0:37:99:0,105,1435	1/1:11,8:19:30.08:334,30,0	1/1:17,5:22:22.12:626,22,0	1/1:3,26:29:75.20:834,75,0	1/1:1,12:13:39.11:435,39,0
chr10	65788619	.	GC	G	8127.67	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=16.609;DP=682;FS=4.031;HRun=1;HaplotypeScore=176.7535;InbreedingCoeff=0.9968;MQ=77.44;MQ0=1;MQRankSum=-10.009;QD=24.26;ReadPosRankSum=3.540;VQSLOD=4.9160;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,123,1780	1/1:5,5:10:21.02:220,21,0	0/0:29,0:28:67.56:0,68,969	0/0:37,0:33:84.90:0,85,1297	0/0:25,0:25:75.24:0,75,1140	1/1:9,14:23:24.06:262,24,0	1/1:25,0:25:57.15:634,57,0	0/0:36,0:36:94.90:0,95,663	0/0:36,0:36:86.75:0,87,759	0/0:20,0:20:54.17:0,54,802	0/0:9,0:9:27.09:0,27,409	1/1:22,0:22:60.15:655,60,0	0/0:16,0:16:48.16:0,48,732	1/1:8,18:26:30.08:341,30,0	1/1:33,1:33:81.20:890,81,0	0/0:22,0:22:66.21:0,66,1009	1/1:26,0:26:75.20:834,75,0	0/0:26,0:26:50.79:0,51,405	1/1:22,1:23:60.15:654,60,0	1/1:11,1:12:24.06:267,24,0	1/1:28,0:28:66.07:714,66,0	1/1:7,17:24:42.05:455,42,0	0/0:12,0:12:30.10:0,30,457	0/0:37,0:37:99:0,111,1689	1/1:9,9:18:30.08:328,30,0	1/1:9,15:24:16.21:618,16,0	1/1:27,0:27:75.20:834,75,0	1/1:12,1:13:39.10:422,39,0
chr10	65788638	.	T	TGTGTGTGC	18833.91	PASS	AB=1.000;AC=37;AF=0.661;AN=56;BaseQRankSum=9.675;DP=690;FS=4.721;HRun=0;HaplotypeScore=233.0318;InbreedingCoeff=0.7575;MQ=58.94;MQ0=1;MQRankSum=-12.802;QD=36.86;ReadPosRankSum=-0.890;VQSLOD=4.3258;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:38,0:38:5.72:6,0,1832	1/1:13,0:13:17.73:655,18,0	0/0:33,0:23:19.66:0,20,310	0/0:31,0:26:42.02:0,42,656	0/1:23,0:23:19.53:20,0,1006	1/1:24,0:24:30.10:1096,30,0	1/1:27,0:27:33.06:873,33,0	1/1:30,0:41:62.36:1005,62,0	1/1:13,18:36:48.16:1991,48,0	0/0:23,0:23:60.18:0,60,1251	0/0:10,0:10:21.04:0,21,434	1/1:22,0:23:42.14:1399,42,0	0/0:13,0:13:33.05:0,33,637	1/1:27,0:28:27.09:954,27,0	1/1:31,0:30:72.22:2466,72,0	0/0:22,0:22:42.13:0,42,1027	1/1:26,0:27:26.21:626,26,0	1/1:10,12:24:5.07:611,5,0	1/1:21,0:21:17.81:454,18,0	1/1:10,0:10:18.06:670,18,0	1/1:33,0:34:20.80:562,21,0	1/1:21,0:21:24.08:880,24,0	0/0:9,0:9:24.03:0,24,458	0/0:37,0:37:96.32:0,96,2405	1/1:20,0:20:36.09:1172,36,0	0/1:31,0:31:7.98:1868,0,8	1/1:25,0:25:50.97:1431,51,0	1/1:14,0:14:8.93:96,9,0
chr10	65788646	.	C	CGTGTGTGG	21856.01	PASS	AB=1.000;AC=33;AF=0.589;AN=56;BaseQRankSum=6.689;DP=710;FS=8.998;HRun=0;HaplotypeScore=208.1888;InbreedingCoeff=0.7513;MQ=54.13;MQ0=1;MQRankSum=-13.342;QD=47.72;ReadPosRankSum=0.655;VQSLOD=3.7314;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,109,2293	1/1:6,5:12:29.46:846,29,0	0/0:32,0:20:42.17:0,42,577	0/0:33,0:27:63:0,63,1135	0/0:20,0:20:48.12:0,48,1187	1/1:13,12:25:44.97:1398,45,0	1/1:19,6:25:47.95:968,48,0	0/1:41,0:41:99:143,0,322	0/1:37,0:37:95.75:1672,0,96	0/0:24,0:24:66.16:0,66,1503	0/0:10,0:10:24.06:0,24,527	1/1:9,20:31:53.46:1720,53,0	0/0:12,0:12:33.11:0,33,761	1/1:17,8:26:42.08:1258,42,0	1/1:9,26:37:81.25:3020,81,0	0/0:22,0:22:60.09:0,60,1257	1/1:19,3:22:44.17:816,44,0	0/1:27,0:27:59.86:601,0,60	1/1:19,2:21:44.69:618,45,0	1/1:1,5:7:21.06:798,21,0	1/1:30,5:35:72.17:1426,72,0	1/1:16,7:23:30.05:1078,30,0	0/0:12,0:12:36:0,36,610	0/0:42,0:42:99:0,114,2702	1/1:11,10:21:47.93:1501,48,0	1/1:19,12:31:2.56:2023,3,0	1/1:12,12:25:69.02:1800,69,0	1/1:11,0:11:17.90:170,18,0
chr10	65788874	.	CAGTTCTCTGTCTA	C	1614.89	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.382;DP=690;FS=9.015;HRun=0;HaplotypeScore=250.3801;InbreedingCoeff=0.9995;MQ=90.47;MQ0=0;MQRankSum=-2.899;QD=62.11;ReadPosRankSum=-2.093;VQSLOD=1.7162;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,129,8069	0/0:11,0:11:33.11:0,33,2089	0/0:32,0:32:80.82:0,81,3528	0/0:31,0:31:80.02:0,80,3139	0/0:27,0:27:78.27:0,78,4859	0/0:14,0:14:39.13:0,39,2390	0/0:27,0:27:81.23:0,81,4539	1/1:10,16:26:48.16:1710,48,0	0/0:30,0:30:87.30:0,87,5526	0/0:29,0:29:84.29:0,84,5287	0/0:17,0:17:48.16:0,48,2742	0/0:29,0:29:72.25:0,72,4647	0/0:17,0:17:45.15:0,45,2921	0/0:21,0:21:57.20:0,57,3616	0/0:35,0:35:81.28:0,81,5193	0/0:21,0:21:63.22:0,63,3828	0/0:35,0:35:99:0,99,5992	0/0:30,0:30:87.30:0,87,5470	0/0:21,0:21:63.21:0,63,3346	0/0:16,0:16:48.16:0,48,3087	0/0:27,0:27:66.17:0,66,3842	0/0:26,0:26:72.25:0,72,4397	0/0:15,0:15:39.13:0,39,2431	0/0:24,0:24:72.25:0,72,4625	0/0:21,0:21:63.21:0,63,3730	0/0:26,0:26:75.26:0,75,4862	0/0:23,0:22:51.13:0,51,3082	0/0:14,0:14:39.13:0,39,2572
chr10	65788956	.	G	GTCCC	18819.57	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-14.082;DP=657;FS=1.789;HRun=0;HaplotypeScore=95.4846;InbreedingCoeff=0.9847;MQ=80.46;MQ0=0;MQRankSum=-6.204;QD=54.39;ReadPosRankSum=0.654;VQSLOD=5.7470;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,117,2086	1/1:2,7:9:18.06:470,18,0	0/0:27,0:26:63.21:0,63,1096	0/0:14,0:14:30.10:0,30,481	0/0:17,0:17:42.14:0,42,764	1/1:0,20:21:60.21:1559,60,0	1/1:7,28:38:90.31:2286,90,0	0/0:18,0:18:42.14:0,42,761	0/0:26,0:26:69.20:0,69,1194	0/0:25,0:25:66.23:0,66,1199	0/0:8,0:8:18.06:0,18,327	1/1:5,27:33:81.23:2062,81,0	0/0:22,0:22:63.17:0,63,1111	1/1:4,20:25:57.20:1492,57,0	1/1:8,20:30:51.18:1334,51,0	0/0:24,0:24:63.22:0,63,1146	1/1:2,31:36:78.24:2030,78,0	0/0:41,0:41:99:0,117,2128	1/1:8,4:17:36.11:776,36,0	1/1:4,8:12:24.08:627,24,0	1/1:10,30:41:75.10:1868,75,0	1/1:3,12:15:33.11:816,33,0	0/0:18,0:18:51.15:0,51,895	0/0:32,0:32:87.30:0,87,1543	1/1:2,10:14:27.09:682,27,0	1/1:4,16:24:8.80:1404,9,0	1/1:4,19:23:42.14:1099,42,0	1/1:2,5:7:12.04:314,12,0
chr10	65789761	.	CA	C	252.47	PASS	AB=0.586;AC=20;AF=0.417;AN=48;BaseQRankSum=6.134;DP=331;FS=3.565;HRun=2;HaplotypeScore=47.3264;InbreedingCoeff=0.5751;MQ=99.00;MQ0=0;MQRankSum=-4.476;QD=8.14;ReadPosRankSum=-4.010;VQSLOD=-0.3854;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,144,2137	1/1:0,2:2:6.02:78,6,0	0/0:24,0:24:65.94:0,66,889	0/0:17,0:17:45.15:0,45,673	0/0:25,0:25:75.25:0,75,1124	./.	1/1:1,2:3:3.01:39,3,0	0/0:6,0:6:18.06:0,18,269	0/0:2,0:2:5.99:0,6,48	0/0:39,0:39:99:0,114,1625	0/0:25,0:25:75.23:0,75,1087	./.	0/0:24,0:24:72.23:0,72,1041	1/1:2,0:2:2.97:20,3,0	1/1:1,1:2:2.97:20,3,0	0/0:25,0:25:75.25:0,75,1119	./.	0/0:2,0:2:6.02:0,6,90	1/1:1,0:1:2.98:21,3,0	0/1:2,4:6:1.87:49,0,2	1/1:5,0:5:5.96:44,6,0	1/1:1,2:3:2.94:18,3,0	0/0:29,0:29:87.29:0,87,1303	0/0:30,0:30:87.19:0,87,1231	1/1:1,1:2:2.22:7,2,0	0/1:1,3:4:32.98:75,0,33	1/1:0,1:1:3.01:39,3,0	./.
chr10	65790055	.	TGTG	T	887.49	PASS	AB=0.793;AC=8;AF=0.143;AN=56;BaseQRankSum=8.393;DP=546;FS=24.840;HRun=0;HaplotypeScore=120.4237;InbreedingCoeff=0.1132;MQ=65.71;MQ0=0;MQRankSum=-7.945;QD=10.57;ReadPosRankSum=1.927;VQSLOD=1.5272;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,123,2716	1/1:0,4:4:12.04:209,12,0	0/0:19,0:13:36.12:0,36,755	0/0:18,0:13:33.11:0,33,734	0/0:19,0:19:54.19:0,54,1251	0/0:18,0:18:51.18:0,51,1189	0/0:12,0:12:36.11:0,36,764	0/0:28,0:28:81.27:0,81,1814	0/0:22,0:22:63.20:0,63,1441	0/0:22,0:22:66.23:0,66,1464	0/0:16,0:16:45.12:0,45,1063	0/1:12,1:13:13.56:14,0,797	0/0:19,0:19:57.20:0,57,1317	0/0:20,0:20:60.21:0,60,1388	0/0:25,0:25:69.22:0,69,1518	0/0:24,0:24:72.25:0,72,1702	0/0:21,1:22:63.22:0,63,1441	0/0:23,0:23:69.24:0,69,1568	0/0:23,0:20:57.18:0,57,1228	0/1:12,2:14:66.05:66,0,693	0/0:21,0:21:63.20:0,63,1421	0/1:6,1:7:34.63:35,0,334	0/0:14,0:14:42.14:0,42,991	0/0:22,0:22:66.23:0,66,1552	0/1:2,5:7:99:242,0,120	0/1:23,6:29:99:227,0,1472	0/0:31,1:32:40.59:0,41,2053	0/1:5,5:10:99:234,0,284
chr10	65790215	.	T	TAA	6189.25	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-8.512;DP=361;FS=60.043;HRun=6;HaplotypeScore=56.1981;InbreedingCoeff=0.9373;MQ=61.03;MQ0=0;MQRankSum=-7.617;QD=38.21;ReadPosRankSum=0.656;VQSLOD=0.4646;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:59.65:0,60,748	1/1:3,1:4:3.01:51,3,0	0/0:9,0:9:17.63:0,18,192	0/0:6,0:6:5.97:0,6,62	0/0:28,0:28:81.20:0,81,959	1/1:3,6:9:16.17:345,16,0	1/1:0,2:2:6.02:101,6,0	0/0:27,0:27:63.18:0,63,758	0/0:9,0:9:24.07:0,24,293	0/0:18,0:18:51.15:0,51,612	0/0:20,0:20:54.16:0,54,658	1/1:2,6:8:21.54:355,22,0	0/0:9,0:9:21.06:0,21,256	1/1:1,10:11:24.08:406,24,0	1/1:1,11:12:30.10:507,30,0	0/0:9,0:9:27.06:0,27,316	1/1:4,10:14:29.13:463,29,0	0/0:20,0:20:48.14:0,48,584	1/1:3,9:13:29.53:457,30,0	1/1:3,11:14:33.11:557,33,0	1/1:2,7:9:24.08:383,24,0	1/1:6,5:11:15.05:254,15,0	0/0:14,0:14:33.10:0,33,403	0/0:5,0:5:15.05:0,15,183	1/1:3,10:13:33.11:546,33,0	1/1:2,10:12:30.10:507,30,0	1/1:4,18:22:49.50:859,49,0	1/1:0,7:8:24.08:398,24,0
chr10	65790226	.	T	TA	2662.12	PASS	AB=0.774;AC=14;AF=0.250;AN=56;BaseQRankSum=7.904;DP=418;FS=121.748;HRun=2;HaplotypeScore=77.5258;InbreedingCoeff=-0.3350;MQ=60.40;MQ0=0;MQRankSum=-9.954;QD=12.86;ReadPosRankSum=-1.824;VQSLOD=-0.1205;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:69.23:0,69,956	0/1:1,6:7:20.65:265,0,21	0/0:9,0:9:24.88:0,25,309	0/0:4,0:4:12.03:0,12,145	0/0:32,0:32:96.32:0,96,1335	0/1:10,11:20:99:420,0,313	0/1:2,1:3:38.71:39,0,74	0/0:29,0:29:81.26:0,81,1119	0/0:11,0:11:33.11:0,33,462	0/0:15,0:15:45.15:0,45,628	0/0:23,0:23:69.23:0,69,965	0/1:9,3:12:99:152,0,260	0/0:9,0:9:27.09:0,27,376	0/1:9,1:10:23.66:24,0,268	0/1:11,6:17:99:236,0,373	0/0:9,0:9:27.09:0,27,378	0/1:15,3:18:99:213,0,406	0/0:16,0:16:48.16:0,48,666	0/1:12,2:14:99:123,0,359	0/1:13,15:28:99:716,0,336	0/0:9,0:9:24.08:0,24,335	0/1:6,1:7:26.68:27,0,229	0/0:15,0:15:45.14:0,45,612	0/0:5,0:5:15.05:0,15,209	0/1:9,7:16:99:236,0,333	0/1:14,5:19:99:181,0,385	0/1:20,4:24:99:123,0,689	0/1:9,2:11:64.76:65,0,300
chr10	65790334	.	AT	A	7074.11	PASS	AB=0.955;AC=43;AF=0.768;AN=56;BaseQRankSum=10.286;DP=487;FS=0.945;HRun=10;HaplotypeScore=56.4870;InbreedingCoeff=0.9193;MQ=73.18;MQ0=0;MQRankSum=-2.329;QD=18.71;ReadPosRankSum=2.839;VQSLOD=5.6489;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:45.07:0,45,476	1/1:1,13:14:32.99:286,33,0	0/1:20,1:17:2.59:3,0,128	0/0:10,0:7:17.95:0,18,170	0/0:31,0:31:84.22:0,84,921	1/1:1,16:17:32.99:286,33,0	1/1:1,6:7:15:130,15,0	1/1:6,24:30:68.94:595,69,0	1/1:2,13:15:29.98:260,30,0	1/1:4,18:22:53.98:469,54,0	1/1:7,23:30:45.47:571,45,0	1/1:1,7:8:17.99:156,18,0	0/0:18,0:18:51.14:0,51,564	1/1:3,5:8:16.81:135,17,0	1/1:0,18:18:47.99:417,48,0	1/1:1,16:17:41.99:365,42,0	1/1:1,20:21:41.99:365,42,0	1/1:2,8:10:20.99:182,21,0	1/1:2,12:14:38.99:336,39,0	1/1:3,26:29:59.07:624,59,0	1/1:1,7:8:17.99:156,18,0	1/1:1,10:11:29.99:260,30,0	0/0:26,0:27:74.62:0,75,787	0/0:5,0:5:12.03:0,12,133	1/1:0,10:10:24:208,24,0	1/1:2,18:20:23.83:435,24,0	1/1:2,15:17:38.99:338,39,0	1/1:4,27:31:56.98:495,57,0
chr10	65790583	.	C	CATT	16365.60	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-14.727;DP=634;FS=6.126;HRun=0;HaplotypeScore=81.2684;InbreedingCoeff=0.9959;MQ=78.47;MQ0=0;MQRankSum=-3.817;QD=46.89;ReadPosRankSum=3.828;VQSLOD=7.0044;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:57.19:0,57,848	1/1:2,6:8:15.05:316,15,0	0/0:13,0:13:24.80:0,25,370	0/0:23,0:22:36.91:0,37,419	0/0:16,0:16:36.12:0,36,542	1/1:2,27:29:75.17:1493,75,0	1/1:2,22:24:60.16:1194,60,0	0/0:44,0:44:96.32:0,96,1438	0/0:25,0:25:66.22:0,66,994	0/0:24,0:24:66.18:0,66,961	0/0:14,0:14:33.11:0,33,489	1/1:4,22:28:54.19:1138,54,0	0/0:25,0:25:69.23:0,69,1039	1/1:2,11:14:24.08:505,24,0	1/1:4,26:30:69.19:1409,69,0	0/0:32,0:32:84.28:0,84,1264	1/1:4,26:30:69.24:1453,69,0	0/0:7,0:7:18.06:0,18,269	1/1:7,10:17:33.11:672,33,0	1/1:2,18:20:57.07:1045,57,0	1/1:8,18:28:45.15:946,45,0	1/1:4,11:15:27.05:526,27,0	0/0:20,0:20:51.17:0,51,768	0/0:17,0:17:51.16:0,51,748	1/1:2,13:15:36.08:715,36,0	1/1:3,25:28:75.26:1558,75,0	1/1:5,38:44:99:2321,111,0	1/1:0,19:19:51.18:1074,51,0
chr10	65791918	.	TAC	T	11432.76	PASS	AB=0.517;AC=35;AF=0.625;AN=56;BaseQRankSum=10.407;DP=550;FS=0.000;HRun=0;HaplotypeScore=70.3929;InbreedingCoeff=0.9168;MQ=86.71;MQ0=0;MQRankSum=-3.377;QD=33.53;ReadPosRankSum=1.762;VQSLOD=6.6040;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,147,2569	1/1:1,7:8:21.07:284,21,0	0/0:23,0:23:56.54:0,57,959	0/0:19,0:19:54.18:0,54,912	0/0:15,0:15:45.15:0,45,788	1/1:1,8:9:24.08:325,24,0	1/1:1,27:28:75.25:1015,75,0	1/1:7,32:39:96.27:1263,96,0	1/1:1,17:18:48.16:649,48,0	0/0:14,0:14:36.12:0,36,631	0/0:13,0:13:39.12:0,39,647	1/1:4,15:19:36.12:487,36,0	0/0:16,0:16:45.15:0,45,788	1/1:1,16:17:42.14:568,42,0	1/1:2,8:10:27.09:365,27,0	0/0:14,0:14:39.13:0,39,683	1/1:2,37:39:99:1380,102,0	1/1:3,17:20:48.16:649,48,0	1/1:0,16:17:51.12:669,51,0	1/1:2,8:10:27.09:365,27,0	1/1:6,54:60:99:1827,135,0	1/1:0,11:11:33.11:446,33,0	0/0:13,0:13:39.12:0,39,655	0/0:32,0:32:96.31:0,96,1654	1/1:1,5:5:12.04:162,12,0	0/1:1,14:15:13.56:410,0,14	1/1:1,10:11:30.10:406,30,0	1/1:0,4:4:12.04:162,12,0
chr10	65792343	.	A	AG	17821.92	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=4.704;DP=742;FS=0.606;HRun=3;HaplotypeScore=96.0067;InbreedingCoeff=0.9944;MQ=81.46;MQ0=0;MQRankSum=-6.337;QD=36.45;ReadPosRankSum=1.503;VQSLOD=4.9145;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,129,1548	1/1:0,6:6:12.04:168,12,0	0/0:21,0:21:60.15:0,60,697	0/0:28,0:28:70.49:0,70,773	0/0:16,0:16:42.12:0,42,490	1/1:1,14:15:39.13:546,39,0	1/1:0,32:32:78.26:1092,78,0	1/1:2,23:25:66.21:904,66,0	1/1:0,30:30:84.28:1176,84,0	0/0:28,0:28:78.23:0,78,926	0/0:7,0:7:21.06:0,21,251	1/1:4,31:35:96.32:1335,96,0	0/0:37,0:37:99:0,111,1332	1/1:3,38:42:99:1504,108,0	1/1:1,30:31:78.26:1085,78,0	0/0:21,0:21:60.18:0,60,720	1/1:2,34:36:96.32:1338,96,0	1/1:2,42:44:99:1678,120,0	1/1:0,15:15:45.12:610,45,0	1/1:1,14:15:42.13:572,42,0	1/1:3,75:78:99:2729,196,0	1/1:1,13:14:30.10:420,30,0	0/0:13,0:13:39.11:0,39,456	0/0:38,0:38:99:0,105,1260	1/1:0,15:15:42.10:566,42,0	1/1:1,28:29:78.26:1092,78,0	1/1:0,18:18:48.16:671,48,0	1/1:1,8:9:24.08:336,24,0
chr10	65792564	.	G	GGAGGAGGAAGAA	30247.91	PASS	AB=0.898;AC=33;AF=0.589;AN=56;BaseQRankSum=13.257;DP=952;FS=13.928;HRun=0;HaplotypeScore=418.5752;InbreedingCoeff=0.7852;MQ=48.68;MQ0=2;MQRankSum=-15.521;QD=44.35;ReadPosRankSum=-3.344;VQSLOD=3.4155;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:48.15:0,48,1425	1/1:21,0:21:45.15:1636,45,0	0/0:30,0:26:18.75:0,19,509	0/0:37,0:31:34.63:0,35,886	0/0:11,0:11:27.08:0,27,861	1/1:35,0:35:64.97:1905,65,0	1/1:56,0:56:65.81:1342,66,0	0/1:30,0:29:11.60:942,0,12	0/1:20,8:31:61.15:748,0,61	0/0:31,0:31:81.28:0,81,2470	0/0:7,0:7:15.05:0,15,498	1/1:52,0:52:95.91:2467,96,0	0/0:32,0:32:81.28:0,81,2629	1/1:54,0:54:81.04:2143,81,0	1/1:57,0:57:99:3546,120,0	0/0:27,0:27:69.24:0,69,2216	1/1:40,0:40:39.13:1111,39,0	0/1:21,1:22:10.09:611,0,10	1/1:18,0:17:20.92:288,21,0	1/1:27,0:27:60.12:1564,60,0	1/1:60,0:59:52.73:926,53,0	1/1:34,0:33:74.87:1777,75,0	0/0:15,0:15:33.11:0,33,1146	0/0:55,0:54:99:0,129,4043	1/1:38,0:38:90.24:2246,90,0	1/1:61,0:61:25.53:4349,26,0	1/1:27,0:26:62.94:1548,63,0	1/1:19,0:19:35.07:1097,35,0
chr10	65792593	.	AG	A	10186.30	PASS	AB=0.884;AC=32;AF=0.571;AN=56;BaseQRankSum=16.833;DP=868;FS=2.839;HRun=6;HaplotypeScore=234.5929;InbreedingCoeff=0.7306;MQ=46.69;MQ0=12;MQRankSum=-12.816;QD=18.00;ReadPosRankSum=1.238;VQSLOD=2.0058;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:30:55.44:0,55,1052	1/1:8,14:22:53.81:525,54,0	0/0:34,0:13:23.79:0,24,298	0/0:38,0:20:43.32:0,43,516	0/0:15,0:15:45.13:0,45,577	1/1:7,21:30:72.17:768,72,0	1/1:14,28:41:84.11:776,84,0	0/1:30,0:27:7.67:8,0,477	0/1:22,0:23:14.33:14,0,342	0/0:37,0:37:99:0,99,1298	0/0:12,0:12:36.12:0,36,473	1/1:12,27:40:84.20:894,84,0	0/0:36,0:36:99:0,105,1365	1/1:10,29:40:99:1036,99,0	1/1:14,26:40:90.22:959,90,0	0/0:28,0:28:81.26:0,81,1063	1/1:8,15:23:42.57:457,43,0	0/1:16,0:16:43.63:44,0,272	0/1:5,9:14:8.37:234,0,8	1/1:5,16:22:56.10:534,56,0	1/1:16,37:50:63.66:564,64,0	1/1:13,18:32:55.90:552,56,0	0/0:17,0:17:51.15:0,51,653	0/0:54,0:53:99:0,141,1852	1/1:8,26:37:75.11:772,75,0	1/1:19,30:54:47.06:1137,47,0	1/1:9,12:20:54.09:572,54,0	1/1:11,9:19:32.67:342,33,0
chr10	65792599	.	GA	G	3230.05	PASS	AB=0.969;AC=24;AF=0.429;AN=56;BaseQRankSum=19.413;DP=846;FS=0.567;HRun=1;HaplotypeScore=240.4447;InbreedingCoeff=0.5196;MQ=47.73;MQ0=14;MQRankSum=-13.210;QD=6.96;ReadPosRankSum=4.896;VQSLOD=0.7355;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:32:82.20:0,82,1242	1/1:24,0:23:4.90:189,5,0	0/0:36,0:13:29.96:0,30,389	0/0:35,1:18:36.04:0,36,555	0/0:17,0:17:48.13:0,48,663	1/1:31,0:30:4.22:215,4,0	1/1:36,2:37:30.45:315,30,0	0/0:31,1:28:13.27:0,13,632	0/0:20,0:20:13.93:0,14,417	0/0:37,0:37:99:0,111,1548	0/0:13,0:13:36.12:0,36,526	1/1:33,0:33:33.74:359,34,0	0/0:36,0:36:99:0,105,1508	1/1:35,0:35:84.99:410,85,0	1/1:39,0:37:22.35:304,22,0	0/0:30,0:30:90.25:0,90,1255	0/1:27,0:27:96.55:129,0,97	0/0:16,0:16:30.12:0,30,378	0/1:12,1:13:57:81,0,57	0/1:26,0:25:14.38:186,0,14	0/1:51,2:50:41.22:175,0,41	1/1:25,1:25:49.22:254,49,0	0/0:18,0:18:51.15:0,51,719	0/0:57,0:56:99:0,159,2198	1/1:34,1:35:19.31:269,19,0	0/1:47,1:48:31.39:273,0,31	1/1:19,0:18:44.18:217,44,0	0/1:16,1:16:15.38:60,0,15
chr10	65794196	.	C	CTGTGTGTGTG	3810.21	PASS	AB=0.790;AC=18;AF=0.346;AN=52;BaseQRankSum=0.535;DP=800;FS=1.723;HRun=0;HaplotypeScore=261.4803;InbreedingCoeff=0.3843;MQ=62.78;MQ0=8;MQRankSum=-8.113;QD=10.38;ReadPosRankSum=-5.812;VQSLOD=1.4198;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:39:4.60:0,5,754	0/0:8,0:13:11.32:0,11,185	./.	./.	0/0:24,0:25:43.65:0,44,1127	0/0:12,0:16:9.08:0,9,133	0/0:23,0:31:13.04:0,13,262	1/1:37,0:37:41.76:766,42,0	1/1:28,13:43:32.08:1029,32,0	1/1:25,0:30:33.08:1057,33,0	1/1:8,9:17:2.60:115,3,0	0/1:28,0:33:99:140,0,319	0/0:27,0:30:36.12:0,36,916	0/0:13,0:29:21.06:0,21,321	0/1:23,0:41:44.32:44,0,381	1/1:24,0:32:17:472,17,0	0/1:24,0:36:12.02:12,0,425	0/1:27,0:29:21.60:22,0,1039	1/1:19,0:19:10.18:71,10,0	0/0:9,0:18:9.90:0,10,91	0/0:40,0:55:36.95:0,37,575	0/1:16,0:24:17.26:17,0,108	0/0:10,0:12:4.92:0,5,304	0/0:38,0:40:61.89:0,62,1460	0/0:11,0:21:11.18:0,11,488	0/1:12,0:22:64.57:65,0,225	0/0:15,0:24:19.52:0,20,220	0/0:9,0:17:14.89:0,15,215
chr10	65795326	.	C	CTG	24032.10	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=-13.354;DP=716;FS=12.868;HRun=0;HaplotypeScore=81.1289;InbreedingCoeff=0.9936;MQ=81.34;MQ0=2;MQRankSum=-3.721;QD=46.22;ReadPosRankSum=2.602;VQSLOD=5.6820;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:64,0:64:99:0,187,2606	1/1:1,6:8:12.04:220,12,0	0/0:20,0:20:52.92:0,53,637	0/0:20,0:20:41.85:0,42,469	0/0:19,0:19:51.11:0,51,688	1/1:0,20:20:45.15:824,45,0	1/1:3,24:27:66.23:1209,66,0	1/1:1,21:22:63.17:1038,63,0	1/1:0,35:35:99:1814,99,0	1/1:3,32:35:96.32:1729,96,0	1/1:2,14:16:39.13:696,39,0	1/1:0,30:30:75.08:1373,75,0	0/0:23,0:23:63.18:0,63,880	1/1:2,22:25:51.17:934,51,0	1/1:0,30:30:75.26:1374,75,0	1/1:0,20:20:48.16:880,48,0	1/1:3,41:43:99:1978,108,0	1/1:1,26:27:75.26:1373,75,0	1/1:3,17:21:56.95:910,57,0	1/1:2,12:14:36.12:654,36,0	1/1:2,34:36:99:1792,99,0	1/1:1,14:15:36.12:632,36,0	0/0:23,0:23:60.20:0,60,859	0/0:27,0:27:81.19:0,81,1063	1/1:0,25:25:69.24:1263,69,0	1/1:1,28:31:90.26:1582,90,0	1/1:2,28:29:75.08:1373,75,0	1/1:0,8:8:21.07:385,21,0
chr10	65799868	.	TGTGTGTGTGTGTGTGTGTGC	T	1907.07	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=-2.300;DP=561;FS=12.243;HRun=0;HaplotypeScore=212.9407;InbreedingCoeff=-0.2345;MQ=51.38;MQ0=36;MQRankSum=0.746;QD=6.23;ReadPosRankSum=-4.188;VQSLOD=0.8104;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:40:69.38:0,69,2898	0/1:3,0:3:17.94:18,0,86	0/0:18,0:9:26.66:0,27,206	0/0:21,0:6:17.89:0,18,160	0/0:17,0:16:29.99:0,30,1454	0/1:29,0:29:99:105,0,1192	0/1:23,0:23:99:224,0,253	0/1:18,0:16:99:182,0,188	0/1:20,0:19:58.53:59,0,1074	0/1:14,0:13:47.81:156,0,48	1/1:8,0:7:3.01:90,3,0	0/1:19,0:19:99:120,0,687	0/0:7,0:7:16.28:0,16,444	0/1:10,0:10:48.96:49,0,296	0/0:28,0:26:15.05:0,15,437	1/1:5,16:20:11.85:618,12,0	0/0:36,0:35:23.76:0,24,617	0/1:28,0:25:99:126,0,1618	0/1:17,0:13:99:124,0,346	0/1:7,0:7:40.49:40,0,65	0/1:43,0:38:24.28:24,0,1909	0/1:11,0:10:33.38:33,0,230	0/0:16,0:16:44.73:0,45,1457	0/0:46,0:44:99:0,104,4603	0/1:13,0:12:4.86:5,0,449	0/0:16,0:16:18.23:0,18,1045	0/1:22,0:21:99:99,0,529	0/0:5,0:4:10.85:0,11,324
chr10	65799878	.	TGTGTGTGTGC	T	5010.63	PASS	AB=0.917;AC=34;AF=0.630;AN=54;BaseQRankSum=-2.489;DP=513;FS=24.815;HRun=0;HaplotypeScore=122.9300;InbreedingCoeff=0.5768;MQ=59.60;MQ0=32;MQRankSum=-0.037;QD=16.37;ReadPosRankSum=2.934;VQSLOD=1.8715;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:39:66.15:0,66,1218	1/1:3,0:3:5.99:48,6,0	0/0:23,0:14:34.85:0,35,327	0/0:29,0:14:41.78:0,42,377	0/0:15,0:15:23.94:0,24,542	1/1:22,0:22:47.06:452,47,0	1/1:28,0:28:64.42:576,64,0	1/1:15,0:13:29.21:267,29,0	0/1:22,0:21:99:225,0,186	1/1:10,0:9:26.91:243,27,0	./.	0/1:15,0:15:9.32:202,0,9	0/0:6,0:6:12.13:0,12,222	1/1:8,0:8:22.79:178,23,0	0/0:25,0:23:2.37:0,2,8	1/1:18,0:17:11.83:283,12,0	1/1:1,28:28:3.01:99,3,0	0/1:27,0:24:99:382,0,102	1/1:16,0:12:30.83:261,31,0	1/1:5,0:5:11.33:98,11,0	1/1:35,0:31:73.33:642,73,0	1/1:9,0:9:17.63:146,18,0	0/0:18,0:18:50.51:0,51,679	0/0:42,0:40:99:0,101,2228	1/1:8,0:7:11.98:100,12,0	0/1:7,7:14:62.41:255,0,62	1/1:19,0:18:44.21:531,44,0	1/1:3,0:2:2.99:24,3,0
chr10	65799880	.	TGTGTGTGC	T	5026.39	PASS	AB=1.000;AC=38;AF=0.704;AN=54;BaseQRankSum=-1.631;DP=497;FS=16.953;HRun=0;HaplotypeScore=104.4363;InbreedingCoeff=0.7052;MQ=61.06;MQ0=29;MQRankSum=-0.511;QD=15.86;ReadPosRankSum=2.985;VQSLOD=2.6820;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:38:69.05:0,69,1017	1/1:3,0:3:5.99:48,6,0	0/0:24,0:15:37.85:0,38,356	0/0:29,0:14:41.78:0,42,377	0/0:13,0:13:23.94:0,24,465	1/1:19,0:19:47.40:438,47,0	1/1:26,0:26:64.90:545,65,0	1/1:14,0:12:32.93:273,33,0	0/1:20,0:20:55.78:231,0,56	1/1:11,0:10:29.91:271,30,0	./.	1/1:14,0:14:29.52:235,30,0	0/0:6,0:6:11.51:0,12,171	1/1:8,0:8:22.79:178,23,0	1/1:4,20:22:3.01:36,3,0	1/1:17,0:17:12.39:227,12,0	1/1:29,0:28:3.01:67,3,0	1/1:27,0:24:56.81:489,57,0	1/1:16,0:13:31.16:261,31,0	1/1:5,0:5:11.40:99,11,0	1/1:33,0:29:74.76:611,75,0	1/1:9,0:9:17.57:146,18,0	0/0:18,0:18:44.51:0,45,513	0/0:42,0:40:99:0,101,1881	1/1:7,0:6:11.99:100,12,0	0/1:14,0:14:20.20:258,0,20	1/1:19,0:18:44.42:490,44,0	1/1:2,0:1:2.99:24,3,0
chr10	65799886	.	TGC	T	5261.14	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=-1.584;DP=495;FS=3.989;HRun=0;HaplotypeScore=66.1736;InbreedingCoeff=0.8194;MQ=67.72;MQ0=19;MQRankSum=-2.446;QD=16.24;ReadPosRankSum=1.891;VQSLOD=4.6770;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:41:68.22:0,68,516	1/1:3,0:3:5.99:48,6,0	0/0:27,0:18:46.77:0,47,423	0/0:32,0:17:50.36:0,50,434	0/0:13,0:13:12.69:0,13,196	1/1:21,0:21:53.93:447,54,0	1/1:26,0:26:62.76:508,63,0	1/1:3,11:13:35.93:301,36,0	1/1:15,1:16:41.91:364,42,0	1/1:14,0:13:38.92:355,39,0	1/1:1,6:7:3:25,3,0	1/1:13,0:13:29.81:236,30,0	0/0:4,0:4:5.95:0,6,44	1/1:11,0:11:31.78:253,32,0	1/1:21,0:20:2.94:18,3,0	1/1:17,0:17:8.89:77,9,0	1/1:29,0:28:3.01:39,3,0	1/1:25,0:22:62.82:508,63,0	1/1:17,0:15:38.85:313,39,0	1/1:5,0:5:11.95:100,12,0	1/1:33,0:32:83.71:665,84,0	1/1:11,0:11:23.89:196,24,0	0/0:18,0:18:50.11:0,50,356	0/0:34,0:33:88.73:0,89,708	1/1:6,0:5:11.99:100,12,0	1/1:13,0:13:35.07:295,35,0	1/1:21,0:20:47.80:389,48,0	1/1:1,0:1:2.99:24,3,0
chr10	65801765	.	A	AT	4398.48	PASS	AB=1.000;AC=35;AF=0.625;AN=56;BaseQRankSum=4.325;DP=429;FS=0.919;HRun=10;HaplotypeScore=62.2674;InbreedingCoeff=0.7510;MQ=67.72;MQ0=2;MQRankSum=0.294;QD=15.65;ReadPosRankSum=0.553;VQSLOD=5.1489;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:71.84:0,72,581	1/1:2,4:6:7.46:92,7,0	0/0:21,0:11:16.39:0,16,95	0/0:10,0:4:4.94:0,5,22	0/0:16,0:16:41.93:0,42,342	1/1:3,11:14:27.07:286,27,0	1/1:2,7:9:18.04:184,18,0	0/1:30,0:30:31.16:50,0,31	1/1:0,7:7:18.04:190,18,0	0/1:22,0:22:4.95:5,0,41	0/0:11,0:11:21.58:0,22,76	1/1:0,2:3:8.96:81,9,0	0/0:16,0:16:38.92:0,39,317	1/1:2,9:11:23.93:254,24,0	1/1:0,17:17:42.06:430,42,0	0/1:14,0:14:9.33:35,0,9	1/1:1,14:15:33.08:349,33,0	0/0:25,0:25:62.83:0,63,507	1/1:8,7:16:24.84:223,25,0	1/1:2,9:11:17.92:161,18,0	1/1:7,11:18:27.07:285,27,0	1/1:2,11:13:28.22:262,28,0	0/0:6,0:6:17.98:0,18,148	0/0:11,0:11:26.97:0,27,222	1/1:2,11:13:30.07:315,30,0	1/1:5,14:19:42.51:422,43,0	1/1:2,22:25:56.95:582,57,0	1/1:6,12:18:18.99:192,19,0
chr10	65802129	.	ACGCGCGCGCG	A	1456	PASS	AB=0.861;AC=24;AF=0.462;AN=52;BaseQRankSum=3.725;DP=358;FS=26.857;HRun=0;HaplotypeScore=134.9981;InbreedingCoeff=0.2292;MQ=68.88;MQ0=1;MQRankSum=-3.014;QD=7.35;ReadPosRankSum=-0.733;VQSLOD=0.7725;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:87.25:0,87,3235	./.	0/0:6,0:6:2.92:0,3,17	0/0:14,0:9:0.47:0,0,1	0/0:27,0:27:45.15:0,45,1532	1/1:11,3:14:9.01:186,9,0	0/1:8,4:12:0.20:0,0,0	0/1:10,0:12:0:0,0,0	0/1:14,1:15:34.09:85,0,34	0/0:14,0:14:23.19:0,23,813	1/1:13,0:13:0.47:1,0,0	1/1:8,3:12:9.01:185,9,0	0/0:8,0:8:24.07:0,24,678	1/1:8,1:11:3.01:88,3,0	0/0:7,1:8:3:0,3,42	0/0:5,0:5:3.01:0,3,126	1/1:15,1:16:12.90:222,13,0	0/1:11,2:13:99:253,0,125	0/1:15,1:16:18.35:96,0,18	1/1:13,2:15:3.45:23,3,0	./.	1/1:11,2:12:3.01:50,3,0	0/0:13,0:13:33.07:0,33,1204	0/0:11,0:11:27.09:0,27,886	1/1:5,3:9:3.01:49,3,0	0/1:11,2:13:41.03:216,0,41	0/1:10,1:11:54.89:70,0,55	0/1:2,1:2:26.25:84,0,26
chr10	65802135	.	G	GCGCA	1373.89	PASS	AB=1.000;AC=28;AF=0.519;AN=54;BaseQRankSum=0.127;DP=333;FS=12.468;HRun=0;HaplotypeScore=102.3417;InbreedingCoeff=0.2492;MQ=62.35;MQ0=2;MQRankSum=0.066;QD=7.68;ReadPosRankSum=-4.509;VQSLOD=-0.1738;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,107,1484	1/1:5,0:5:3:25,3,0	1/1:4,0:4:1.82:5,2,0	0/0:11,0:6:0.86:0,1,3	0/0:22,0:22:50.84:0,51,601	0/1:12,0:12:2.10:101,0,2	0/1:12,0:12:14.02:39,0,14	0/0:10,0:9:17.23:0,17,98	1/1:12,0:12:14.99:134,15,0	1/1:12,1:13:35.96:435,36,0	0/0:2,14:16:0:0,0,0	1/1:12,0:12:11.96:94,12,0	0/0:8,0:8:24.01:0,24,252	0/1:10,0:10:8.13:19,0,8	1/1:8,0:8:9:85,9,0	1/1:0,3:3:3.01:81,3,0	0/1:13,0:13:38.49:41,0,38	0/1:11,0:11:52.51:136,0,53	0/1:13,0:13:26.41:145,0,26	1/1:16,0:16:2.64:33,3,0	./.	1/1:11,0:10:5.98:47,6,0	0/0:15,0:15:45.04:0,45,662	0/0:12,0:12:30.04:0,30,409	1/1:8,0:8:3:25,3,0	0/1:13,0:13:71.11:71,0,81	0/0:11,0:11:14.82:0,15,101	0/1:3,0:2:7.68:27,0,8
chr10	65802137	.	G	GCA	1307.96	PASS	AB=1.000;AC=36;AF=0.643;AN=56;BaseQRankSum=2.842;DP=321;FS=6.102;HRun=0;HaplotypeScore=93.2935;InbreedingCoeff=0.5739;MQ=60.48;MQ0=3;MQRankSum=-0.871;QD=6.61;ReadPosRankSum=-2.777;VQSLOD=2.1739;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,108,1231	1/1:6,0:5:3:25,3,0	0/1:4,0:4:0:0,0,0	0/0:10,0:5:1.03:0,1,4	0/0:21,0:21:53.77:0,54,524	1/1:12,0:12:14.17:118,14,0	1/1:12,0:12:1.97:42,2,0	0/0:9,0:8:17.23:0,17,98	1/1:12,0:12:14.99:126,15,0	1/1:2,11:13:23.17:359,23,0	0/1:15,0:15:0:0,0,0	1/1:12,0:12:11.96:94,12,0	0/0:8,0:8:23.95:0,24,210	1/1:9,0:9:3.47:26,3,0	1/1:8,0:8:8.99:77,9,0	1/1:2,0:2:3.01:32,3,0	1/1:13,0:13:7.10:56,7,0	0/1:13,0:13:8.86:118,0,9	1/1:11,0:11:18.05:169,18,0	1/1:15,0:15:2.96:28,3,0	0/1:8,0:7:0:0,0,0	1/1:9,0:8:5.98:47,6,0	0/0:15,0:15:44.97:0,45,518	0/0:11,0:11:30.01:0,30,337	1/1:9,0:9:3:25,3,0	1/1:12,0:12:15.97:108,16,0	0/0:9,0:9:1.55:0,2,8	1/1:3,0:2:3.47:26,3,0
chr10	65804403	.	T	TAGAC	718.88	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-5.218;DP=565;FS=4.191;HRun=0;HaplotypeScore=84.1178;InbreedingCoeff=0.9335;MQ=57.77;MQ0=4;MQRankSum=0.602;QD=27.65;ReadPosRankSum=2.509;VQSLOD=3.4897;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:32:55.10:0,55,985	0/0:11,0:11:30.06:0,30,420	0/0:16,0:9:8.98:0,9,89	0/0:13,0:11:23.94:0,24,291	0/0:25,0:25:62.98:0,63,733	0/0:23,0:23:54.14:0,54,823	0/0:26,0:26:50.99:0,51,637	0/0:37,0:37:75.10:0,75,892	0/0:17,0:17:46.91:0,47,652	0/0:17,0:17:42.08:0,42,567	0/0:17,0:17:39.08:0,39,543	0/0:28,0:28:75.13:0,75,1044	0/0:17,0:17:48.10:0,48,695	0/0:13,0:13:30.05:0,30,399	0/0:24,0:24:54.11:0,54,769	0/0:16,0:16:48.12:0,48,721	0/0:29,0:29:81.15:0,81,1186	1/1:7,18:25:33.11:813,33,0	0/0:21,0:19:53.92:0,54,667	0/0:23,0:23:57.10:0,57,842	0/0:21,0:21:60.04:0,60,764	0/0:9,0:9:24:0,24,294	0/0:11,0:11:24.05:0,24,349	0/0:12,0:11:27.06:0,27,397	0/0:17,0:17:44.99:0,45,605	0/0:32,0:32:86.85:0,87,1233	0/0:23,0:23:48.12:0,48,722	0/0:7,0:7:21.04:0,21,297
chr10	65806018	.	T	TGGG	2652.81	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-10.271;DP=904;FS=1.222;HRun=4;HaplotypeScore=133.6360;InbreedingCoeff=0.9708;MQ=91.12;MQ0=0;MQRankSum=-2.401;QD=57.67;ReadPosRankSum=-0.895;VQSLOD=2.1231;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:64,0:64:99:0,175,2645	0/0:13,0:13:36.10:0,36,519	0/0:29,0:29:78.25:0,78,1140	0/0:42,0:42:99:0,111,1610	0/0:24,0:24:72.24:0,72,1093	0/0:16,0:16:48.16:0,48,735	0/0:37,0:37:96.32:0,96,1470	1/1:1,23:24:69.18:1434,69,0	0/0:29,0:29:84.27:0,84,1267	0/0:38,0:38:99:0,111,1702	0/0:19,0:19:54.18:0,54,827	0/0:37,0:37:99:0,105,1589	0/0:33,0:33:96.33:0,96,1470	0/0:40,0:40:99:0,120,1838	0/0:44,0:44:99:0,132,1983	0/0:39,0:39:99:0,114,1724	0/0:39,0:39:99:0,114,1725	1/1:1,20:22:60.21:1341,60,0	0/0:30,0:30:81.26:0,81,1223	0/0:37,0:37:99:0,108,1656	0/0:66,0:66:99:0,190,2852	0/0:31,0:31:93.32:0,93,1422	0/0:27,0:27:63.20:0,63,965	0/0:33,0:33:93.31:0,93,1421	0/0:26,0:26:75.23:0,75,1127	0/0:38,0:38:99:0,105,1568	0/0:24,0:24:72.23:0,72,1082	0/0:3,0:3:9.03:0,9,138
chr10	65807283	.	T	TG	13316.91	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-15.266;DP=581;FS=11.279;HRun=4;HaplotypeScore=51.6194;InbreedingCoeff=0.9987;MQ=90.08;MQ0=0;MQRankSum=-3.524;QD=34.41;ReadPosRankSum=1.032;VQSLOD=4.6633;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:84.24:0,84,952	1/1:1,8:9:21.07:287,21,0	0/0:23,0:23:42.48:0,42,596	0/0:24,0:24:48.12:0,48,532	0/0:19,0:19:57.16:0,57,647	1/1:0,18:18:48.16:657,48,0	1/1:1,24:25:60.20:821,60,0	1/1:4,16:19:48.15:641,48,0	1/1:1,17:18:42.14:575,42,0	0/0:15,0:15:42.12:0,42,476	0/0:9,0:9:27.08:0,27,306	1/1:0,18:18:42.14:574,42,0	0/0:15,0:15:45.13:0,45,510	1/1:1,18:19:51.17:698,51,0	1/1:1,15:16:45.15:616,45,0	0/0:17,0:17:51.13:0,51,569	1/1:6,37:43:99:1395,102,0	1/1:1,34:35:99:1354,99,0	1/1:5,10:15:23.03:362,23,0	1/1:0,11:11:30.01:368,30,0	1/1:2,38:40:96.32:1312,96,0	1/1:4,14:18:42.13:559,42,0	0/0:17,0:17:42.12:0,42,476	0/0:25,0:25:66.14:0,66,734	1/1:0,19:19:48.16:656,48,0	1/1:2,27:29:81.25:1090,81,0	1/1:1,21:22:63.21:860,63,0	1/1:0,12:12:36.12:492,36,0
chr10	65808514	.	AAACAAAAAACAAAAAAAC	A	7542.70	PASS	AB=1.000;AC=31;AF=0.554;AN=56;BaseQRankSum=4.021;DP=377;FS=37.038;HRun=0;HaplotypeScore=192.4256;InbreedingCoeff=0.7739;MQ=66.51;MQ0=5;MQRankSum=-11.397;QD=45.44;ReadPosRankSum=-3.386;VQSLOD=2.3730;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,99,6365	1/1:4,0:4:12.02:368,12,0	0/0:20,0:13:29.24:0,29,607	0/0:14,0:6:11.94:0,12,408	0/0:14,0:14:42.11:0,42,2720	1/1:7,3:10:28.85:803,29,0	1/1:9,3:12:29.77:596,30,0	1/1:10,0:10:23.79:206,24,0	1/1:9,0:9:26.95:319,27,0	0/0:27,0:27:78.17:0,78,3525	0/0:15,0:15:45.01:0,45,2425	1/1:8,2:10:20.87:405,21,0	0/0:14,0:14:39.07:0,39,2284	1/1:7,1:8:14.99:348,15,0	1/1:10,5:15:42:1288,42,0	0/0:14,0:14:36.08:0,36,2518	1/1:16,2:18:48.41:473,48,0	0/0:24,0:24:61.42:0,61,3899	1/1:10,3:10:9.95:554,10,0	1/1:2,2:4:11.95:343,12,0	0/1:4,0:4:8.79:36,0,9	1/1:4,1:5:14.95:250,15,0	0/0:13,0:13:39.09:0,39,2232	0/0:22,0:22:63.09:0,63,4103	1/1:13,0:13:35.94:606,36,0	0/1:18,0:18:99:367,0,184	1/1:11,0:10:32.86:561,33,0	0/1:2,0:2:9.59:21,0,10
chr10	65808515	.	AACAAAAAACAAAAAAAC	A	7879.53	PASS	AB=0.980;AC=31;AF=0.554;AN=56;BaseQRankSum=3.192;DP=369;FS=35.067;HRun=0;HaplotypeScore=179.3779;InbreedingCoeff=0.8208;MQ=62.94;MQ0=5;MQRankSum=-9.930;QD=48.94;ReadPosRankSum=-3.700;VQSLOD=2.5728;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,102,6192	1/1:2,2:4:12.02:430,12,0	0/0:18,0:11:26.89:0,27,633	0/0:13,0:5:11.96:0,12,414	0/0:14,0:14:42.11:0,42,2568	1/1:8,2:10:30.04:844,30,0	1/1:12,0:12:29.81:548,30,0	1/1:9,0:10:23.71:182,24,0	1/1:8,1:9:26.99:369,27,0	0/0:27,0:27:78.16:0,78,3332	0/0:15,0:15:44.99:0,45,2289	1/1:8,0:8:20.90:390,21,0	0/0:14,0:14:39.06:0,39,2194	1/1:7,1:8:14.99:355,15,0	1/1:13,2:15:42.01:1269,42,0	0/0:13,0:13:36.12:0,36,2387	1/1:18,0:18:48.61:500,49,0	0/0:24,0:24:71.54:0,72,3658	1/1:13,0:10:26.88:585,27,0	1/1:4,0:4:10.23:293,10,0	0/1:4,0:4:1.30:36,0,1	1/1:5,0:5:13.24:242,13,0	0/0:13,0:13:39.09:0,39,2129	0/0:22,0:22:66.14:0,66,4044	1/1:9,3:12:35.98:759,36,0	0/1:15,1:16:99:437,0,174	1/1:9,2:10:31.50:618,31,0	0/1:2,0:2:1.61:22,0,2
chr10	65808516	.	AC	A	2349.89	PASS	AB=1.000;AC=35;AF=0.625;AN=56;BaseQRankSum=8.774;DP=372;FS=29.189;HRun=1;HaplotypeScore=87.9783;InbreedingCoeff=0.8668;MQ=60.35;MQ0=5;MQRankSum=-9.319;QD=12.63;ReadPosRankSum=-1.946;VQSLOD=0.5694;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,102,1110	1/1:3,0:4:11.80:80,12,0	0/0:18,0:11:30.41:0,30,274	0/0:12,1:5:14.91:0,15,157	0/0:16,0:16:27.96:0,28,423	1/1:10,0:10:27.73:214,28,0	1/1:12,1:13:22.14:143,22,0	1/1:9,1:10:22.10:171,22,0	1/1:8,1:9:23.64:191,24,0	0/0:26,0:26:75.14:0,75,814	0/0:15,0:15:45.02:0,45,487	1/1:7,1:8:18.26:120,18,0	0/0:13,0:13:38.31:0,38,430	1/1:8,0:8:9.50:48,10,0	1/1:15,0:15:35.13:233,35,0	0/0:15,0:15:39.10:0,39,457	1/1:18,0:18:30.84:184,31,0	1/1:24,0:24:59.07:250,59,0	1/1:11,2:10:26.71:184,27,0	1/1:4,0:4:5.85:53,6,0	1/1:4,0:4:6.21:38,6,0	1/1:5,0:5:9.12:87,9,0	0/0:13,0:13:39.08:0,39,441	0/0:22,0:22:66.05:0,66,730	1/1:10,1:12:29.07:203,29,0	0/1:16,0:16:6.38:156,0,6	1/1:9,1:10:21.42:171,21,0	1/1:2,0:2:5.80:40,6,0
chr10	65808523	.	AC	A	802.09	PASS	AB=0.989;AC=31;AF=0.554;AN=56;BaseQRankSum=9.345;DP=350;FS=2.279;HRun=1;HaplotypeScore=91.8086;InbreedingCoeff=0.5808;MQ=61.94;MQ0=5;MQRankSum=-8.358;QD=4.92;ReadPosRankSum=-1.821;VQSLOD=-0.2699;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,102,1213	1/1:3,0:3:7.56:27,8,0	0/1:17,1:10:1.21:1,0,140	0/0:15,2:9:5.88:0,6,186	0/0:15,0:15:31.99:0,32,497	1/1:8,0:8:19.09:117,19,0	1/1:9,1:10:10.95:52,11,0	0/1:9,0:9:18.03:18,0,20	1/1:9,0:9:11.06:61,11,0	0/0:22,0:22:63.07:0,63,762	0/0:11,0:11:33.11:0,33,420	1/1:10,0:10:8.43:38,8,0	0/0:14,0:14:40.29:0,40,446	1/1:6,1:7:8.05:38,8,0	1/1:12,0:12:23.04:98,23,0	0/0:16,0:16:39.01:0,39,466	1/1:10,0:10:8.43:49,8,0	0/0:23,1:24:19.96:0,20,136	1/1:12,0:9:22.42:141,22,0	0/1:5,0:5:6.92:25,0,7	1/1:4,0:4:0.36:2,0,0	0/1:7,0:7:0:94,0,0	0/0:10,0:10:30.08:0,30,372	0/0:23,0:23:66.17:0,66,830	1/1:12,0:12:4.83:74,5,0	0/1:11,0:11:27.65:28,0,28	1/1:14,0:14:7.41:126,7,0	1/1:2,0:2:2.03:5,2,0
chr10	65808532	.	C	CA	1171.08	PASS	AB=1.000;AC=16;AF=0.286;AN=56;BaseQRankSum=-5.074;DP=391;FS=0.606;HRun=9;HaplotypeScore=111.0146;InbreedingCoeff=0.3627;MQ=55.14;MQ0=5;MQRankSum=0.792;QD=7.56;ReadPosRankSum=-3.558;VQSLOD=1.2755;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,2:37:59.78:0,60,748	0/0:5,0:5:3.60:0,4,9	0/0:14,0:5:4.63:0,5,18	0/0:16,0:9:14.91:0,15,130	0/0:16,0:16:40.63:0,41,356	0/0:10,0:10:8.64:0,9,24	0/1:15,0:15:7.90:16,0,8	0/0:9,0:9:0.81:0,1,2	0/0:9,0:9:3.48:0,3,13	1/1:4,18:22:54.11:576,54,0	1/1:2,9:11:21.06:232,21,0	0/1:15,0:15:13.40:34,0,13	0/0:10,0:10:16.65:0,17,138	0/1:11,0:11:2.61:3,0,4	0/0:15,0:15:14.10:0,14,41	1/1:1,16:17:33.09:365,33,0	0/0:14,0:14:0.78:0,1,4	0/0:24,0:25:62.02:0,62,526	0/1:12,0:8:7.91:18,0,8	0/0:4,0:4:4:0,4,11	1/1:9,0:9:0.47:1,0,0	1/1:6,0:6:2.79:47,3,0	0/0:10,0:10:23.99:0,24,208	0/0:21,0:21:53.97:0,54,468	0/0:16,0:16:5.93:0,6,18	0/1:22,0:22:3.43:3,0,7	0/1:15,0:15:24.62:30,0,25	0/0:5,0:5:0.22:0,0,1
chr10	65808570	.	ACCTG	A	12169.22	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=9.831;DP=451;FS=17.010;HRun=0;HaplotypeScore=119.7070;InbreedingCoeff=0.9958;MQ=73.60;MQ0=0;MQRankSum=-13.655;QD=48.68;ReadPosRankSum=1.753;VQSLOD=4.3436;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,108,2827	1/1:1,4:5:15.05:284,15,0	0/0:19,0:19:57.20:0,57,1378	0/0:13,0:13:20.84:0,21,550	0/0:22,0:22:60.21:0,60,1544	1/1:2,10:12:30.10:569,30,0	1/1:1,16:17:42.14:797,42,0	1/1:2,22:24:63.15:1086,63,0	1/1:1,12:13:36.12:683,36,0	0/0:13,0:13:36.12:0,36,968	0/0:13,0:13:36.11:0,36,913	1/1:0,14:14:36.12:683,36,0	0/0:13,0:13:39.13:0,39,1043	1/1:1,10:11:30.10:564,30,0	1/1:0,19:19:57.20:1077,57,0	0/0:20,0:20:42.14:0,42,1119	1/1:3,16:19:45.15:854,45,0	0/0:16,0:16:45.15:0,45,1194	1/1:4,8:12:24.07:399,24,0	1/1:0,10:10:30.10:569,30,0	1/1:1,10:11:24.08:455,24,0	1/1:0,14:14:36.12:683,36,0	0/0:11,0:11:30.10:0,30,729	0/0:24,0:24:66.23:0,66,1782	1/1:4,17:21:48.16:910,48,0	1/1:2,20:22:60.21:1139,60,0	1/1:1,16:17:51.17:963,51,0	1/1:1,8:9:24.08:455,24,0
chr10	65808634	.	C	CCTACA	14719.13	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-7.106;DP=457;FS=0.412;HRun=0;HaplotypeScore=103.8830;InbreedingCoeff=0.9669;MQ=58.48;MQ0=0;MQRankSum=-11.065;QD=55.34;ReadPosRankSum=1.664;VQSLOD=5.2596;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:78.25:0,78,1501	1/1:3,1:4:6.02:168,6,0	0/0:18,0:18:45.15:0,45,847	0/0:21,0:19:41.24:0,41,696	0/0:20,0:20:48.16:0,48,932	1/1:2,11:15:27.09:803,27,0	1/1:6,11:17:30.10:893,30,0	1/1:7,4:13:24.08:583,24,0	1/1:2,12:14:36.12:1073,36,0	0/0:23,0:23:66.22:0,66,1268	0/0:14,0:14:39.13:0,39,744	1/1:5,9:15:33.11:963,33,0	0/0:13,0:13:30.09:0,30,561	1/1:5,7:12:24.08:680,24,0	1/1:9,10:19:39.11:1077,39,0	0/0:18,0:18:42.14:0,42,834	1/1:6,20:26:63.22:1861,63,0	1/1:3,8:11:12.04:358,12,0	1/1:7,6:13:21.07:568,21,0	1/1:8,8:16:24.08:700,24,0	1/1:3,6:9:9.03:268,9,0	1/1:7,9:16:27.09:797,27,0	0/0:12,0:12:33.11:0,33,655	0/0:23,0:23:57.17:0,57,1074	1/1:6,8:14:27.09:790,27,0	1/1:8,15:23:48.16:1368,48,0	1/1:7,13:21:45.15:1324,45,0	1/1:2,5:7:15.05:447,15,0
chr10	65808738	.	TACACACACACACAC	T	6764.01	PASS	AB=0.833;AC=30;AF=0.556;AN=54;BaseQRankSum=9.616;DP=515;FS=0.000;HRun=0;HaplotypeScore=169.3781;InbreedingCoeff=0.5457;MQ=57.13;MQ0=9;MQRankSum=-7.714;QD=22.10;ReadPosRankSum=0.987;VQSLOD=3.9824;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:30:33.11:0,33,1615	1/1:2,3:6:9.03:333,9,0	0/0:28,0:10:2.97:0,3,20	0/1:43,0:17:21.91:22,0,56	0/0:8,0:9:18.04:0,18,794	1/1:7,7:15:9.03:333,9,0	./.	0/1:20,0:19:9.92:10,0,10	1/1:10,7:18:15.05:569,15,0	0/0:12,0:15:21.07:0,21,1117	0/0:6,0:13:9.03:0,9,408	1/1:8,3:16:18.06:646,18,0	0/0:16,0:16:24.08:0,24,1181	1/1:4,6:11:12.04:447,12,0	0/1:12,6:18:27.46:224,0,27	0/0:21,0:28:39.49:0,39,1815	1/1:9,8:17:6.02:236,6,0	0/0:20,0:23:33.23:0,33,1385	1/1:9,3:12:3.09:231,3,0	1/1:4,6:11:9.50:334,10,0	1/1:13,6:19:3.01:118,3,0	1/1:7,2:11:12.04:431,12,0	0/0:8,0:9:18.06:0,18,960	0/0:23,0:26:45.15:0,45,2259	1/1:14,8:23:5.07:556,5,0	0/1:9,21:32:99:1337,0,135	1/1:7,13:21:21.07:800,21,0	1/1:13,0:13:6.01:137,6,0
chr10	65809251	.	CTAAGATGTCGT	C	22787.29	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=13.939;DP=554;FS=12.310;HRun=0;HaplotypeScore=185.6385;InbreedingCoeff=0.9783;MQ=84.85;MQ0=0;MQRankSum=-14.676;QD=67.02;ReadPosRankSum=2.392;VQSLOD=3.7057;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,166,8517	1/1:0,6:6:6.02:220,6,0	0/0:23,0:23:68.72:0,69,2712	0/0:20,0:20:54.37:0,54,2289	0/0:15,0:15:42.14:0,42,1974	1/1:0,19:19:36.12:1251,36,0	1/1:0,20:20:33.11:1210,33,0	1/1:1,15:16:26.05:911,26,0	1/1:0,18:18:36.12:1292,36,0	1/1:0,17:17:36.11:1076,36,0	1/1:0,11:11:18.06:649,18,0	1/1:0,28:28:51.18:1816,51,0	0/0:33,0:33:99:0,99,5341	1/1:0,14:14:30.10:1100,30,0	1/1:0,28:28:48.16:1709,48,0	1/1:0,12:12:21.07:755,21,0	1/1:0,20:20:45.15:1637,45,0	0/0:27,0:27:31.28:0,31,3269	1/1:1,27:29:83.12:1778,83,0	1/1:0,12:12:33.11:1150,33,0	1/1:0,27:27:36.10:1280,36,0	1/1:0,12:12:21.07:721,21,0	0/0:18,0:18:51.13:0,51,2381	0/0:23,0:23:66.17:0,66,3341	1/1:0,10:10:21.07:759,21,0	1/1:0,20:20:56.92:1519,57,0	1/1:0,13:13:29.97:1067,30,0	1/1:0,8:8:24.08:885,24,0
chr10	65809568	.	T	TTCTC	698.66	PASS	AB=1.000;AC=16;AF=0.381;AN=42;BaseQRankSum=3.744;DP=508;FS=5.126;HRun=0;HaplotypeScore=101.3269;InbreedingCoeff=0.3120;MQ=69.81;MQ0=13;MQRankSum=-1.908;QD=3.56;ReadPosRankSum=-3.279;VQSLOD=0.5476;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:32,0:28:41.39:141,0,41	0/0:7,0:7:5.39:0,5,85	./.	./.	1/1:15,0:14:3.01:31,3,0	0/1:18,0:18:27.87:28,0,97	0/0:28,0:28:21.04:0,21,261	./.	1/1:18,0:18:3.01:50,3,0	1/1:26,0:26:22.06:230,22,0	./.	0/0:15,0:15:15.04:0,15,199	1/1:17,3:20:0.39:1,0,0	0/0:12,0:12:3.01:0,3,44	0/0:15,0:15:9.03:0,9,129	0/1:25,0:25:21.87:181,0,22	1/1:11,0:10:6.62:98,7,0	./.	0/0:14,0:12:7.26:0,7,87	0/0:12,0:12:2.59:0,3,42	0/0:13,0:11:6.02:0,6,75	0/0:15,0:13:2.08:0,2,74	1/1:14,0:13:6.01:71,6,0	0/0:13,1:17:3.48:0,3,44	./.	0/0:30,0:29:18.27:0,18,244	0/1:15,0:15:0:0,0,0	./.
chr10	65809610	.	C	CTGTGTGTG	1256.89	PASS	AB=0.940;AC=11;AF=0.204;AN=54;BaseQRankSum=4.353;DP=501;FS=31.419;HRun=0;HaplotypeScore=127.2030;InbreedingCoeff=-0.0073;MQ=40.64;MQ0=28;MQRankSum=-4.058;QD=7.62;ReadPosRankSum=-1.652;VQSLOD=0.6044;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:25:42.14:0,42,1083	0/1:10,0:10:99:116,0,190	0/0:7,0:3:6.02:0,6,110	0/0:12,0:1:2.97:0,3,20	0/0:21,0:20:26.99:0,27,643	0/1:24,0:22:99:238,0,258	0/1:26,0:25:64.80:65,0,419	0/0:31,0:30:58.19:0,58,980	0/0:21,0:20:26.88:0,27,543	0/0:25,0:25:62.33:0,62,969	./.	0/1:15,0:18:50.15:50,0,396	0/0:14,0:12:15.04:0,15,330	0/0:5,0:8:5.76:0,6,74	0/0:20,0:19:12.04:0,12,284	0/0:22,0:21:27.08:0,27,524	0/0:11,0:6:8.09:0,8,200	0/0:19,0:19:36.06:0,36,498	0/1:15,5:17:99:335,0,365	0/0:6,0:6:2.55:0,3,58	0/1:13,0:10:4.39:4,0,154	0/0:15,5:17:5.75:0,6,135	0/0:25,0:24:45.15:0,45,1178	0/0:19,0:17:12.04:0,12,345	1/1:13,0:13:2.50:9,2,0	0/1:29,0:27:99:452,0,761	0/0:13,0:13:2.99:0,3,23	1/1:9,0:5:3.01:122,3,0
chr10	65809612	.	C	CTGTGTGTG	1743.55	PASS	AB=1.000;AC=14;AF=0.259;AN=54;BaseQRankSum=3.828;DP=507;FS=19.235;HRun=0;HaplotypeScore=126.0991;InbreedingCoeff=-0.0978;MQ=40.93;MQ0=28;MQRankSum=-0.729;QD=8.15;ReadPosRankSum=-0.746;VQSLOD=1.2822;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:24:42.14:0,42,990	0/1:10,0:10:88.81:190,0,89	0/0:7,0:3:9.03:0,9,149	0/0:15,0:3:6.01:0,6,62	0/0:22,0:21:26.99:0,27,688	0/1:24,0:22:81.04:394,0,81	0/1:26,0:25:97.46:97,0,128	0/0:33,0:32:63.90:0,64,785	0/0:20,0:19:26.98:0,27,570	0/0:25,0:25:58.24:0,58,908	./.	0/1:21,0:19:51.30:51,0,195	0/0:14,0:12:18.03:0,18,364	0/1:8,0:8:16.98:17,0,19	0/0:13,7:19:12.02:0,12,149	0/0:22,0:21:24.07:0,24,407	0/1:11,0:6:21.25:21,0,72	0/0:19,0:19:34.36:0,34,328	0/1:22,0:18:99:378,0,165	0/1:7,0:7:3.48:65,0,3	0/1:13,0:10:24.24:24,0,72	0/1:21,0:17:16.51:17,0,44	0/0:24,0:23:45.15:0,45,1169	0/0:20,0:18:12.04:0,12,301	0/1:13,0:13:0:0,0,0	0/1:29,0:27:99:512,0,316	0/0:12,0:12:0:0,0,0	1/1:9,0:5:3.01:121,3,0
chr10	65809614	.	CTGTGTGTGTGTGTG	C	1624.91	PASS	AB=0.778;AC=3;AF=0.058;AN=52;BaseQRankSum=2.749;DP=541;FS=9.504;HRun=0;HaplotypeScore=164.7099;InbreedingCoeff=0.2628;MQ=40.69;MQ0=28;MQRankSum=-3.553;QD=35.32;ReadPosRankSum=2.419;VQSLOD=2.6461;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:27:45.15:0,45,2593	0/0:11,0:11:15.03:0,15,708	0/0:8,0:3:9.03:0,9,554	0/0:16,0:4:12.04:0,12,581	0/0:23,0:22:33.11:0,33,1814	0/0:26,0:24:30.10:0,30,1558	0/0:29,0:28:14.61:0,15,355	0/0:34,0:33:72.24:0,72,3315	0/0:18,0:19:24.96:0,25,420	1/1:10,15:24:1.09:1354,1,0	./.	0/0:21,0:19:18.04:0,18,558	0/0:14,0:12:18.06:0,18,901	0/0:7,0:7:6.02:0,6,209	0/0:21,0:20:11.83:0,12,362	0/1:15,6:20:10.75:360,0,11	0/0:13,0:8:14.97:0,15,591	0/0:19,0:19:36.12:0,36,1871	0/0:23,0:19:44.48:0,44,2008	0/0:12,0:12:12.04:0,12,634	0/0:11,0:10:13.34:0,13,354	0/0:24,0:20:18.05:0,18,838	0/0:24,0:23:44.99:0,45,2511	0/0:23,0:21:17.80:0,18,956	0/0:15,0:15:2.99:0,3,173	0/0:35,0:33:84.29:0,84,3542	./.	0/0:9,0:5:3.01:0,3,184
chr10	65810230	.	A	ACCTC	7275.50	PASS	AB=0.962;AC=11;AF=0.196;AN=56;BaseQRankSum=5.951;DP=746;FS=2.981;HRun=0;HaplotypeScore=117.9933;InbreedingCoeff=0.9052;MQ=59.05;MQ0=2;MQRankSum=-1.378;QD=42.80;ReadPosRankSum=0.633;VQSLOD=5.4731;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,99,1800	0/0:11,0:11:30.09:0,30,512	0/0:22,0:20:60.21:0,60,1048	0/0:29,0:19:42.05:0,42,709	0/0:20,0:20:54.19:0,54,981	0/0:27,0:27:63.20:0,63,1093	0/0:30,0:30:81.26:0,81,1432	0/0:31,0:31:75.23:0,75,1281	1/1:6,18:24:60.20:1512,60,0	1/1:6,19:25:57.20:1489,57,0	1/1:3,18:22:45.15:1177,45,0	0/0:23,0:23:66.22:0,66,1174	0/0:18,0:18:48.13:0,48,808	0/0:29,0:29:84.27:0,84,1493	0/0:30,0:30:87.28:0,87,1545	1/1:3,22:25:66.23:1706,66,0	0/0:30,0:30:84.29:0,84,1514	1/1:3,18:22:29.25:1385,29,0	0/0:20,0:18:45.15:0,45,819	0/0:31,0:31:84.29:0,84,1518	0/0:30,0:29:81.28:0,81,1454	0/0:25,0:25:66.23:0,66,1196	0/0:25,0:25:63.22:0,63,1131	0/0:23,0:23:66.23:0,66,1196	0/0:31,0:31:90.29:0,90,1596	0/1:49,2:51:6.75:7,0,2433	0/0:36,0:36:96.33:0,96,1726	0/0:21,0:21:63.22:0,63,1146
chr10	65810687	.	A	AAAAAAG	5681.24	PASS	AB=0.861;AC=13;AF=0.232;AN=56;BaseQRankSum=-4.200;DP=555;FS=1.073;HRun=0;HaplotypeScore=110.4862;InbreedingCoeff=0.8871;MQ=57.61;MQ0=2;MQRankSum=-9.342;QD=33.82;ReadPosRankSum=-2.508;VQSLOD=4.1763;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:75.26:0,75,1471	0/0:6,0:6:15.05:0,15,298	0/0:23,0:13:26.22:0,26,384	0/0:15,0:9:14.96:0,15,234	0/0:30,0:30:63.16:0,63,1205	0/0:20,0:20:42.13:0,42,788	0/0:17,0:17:33.10:0,33,596	1/1:25,0:32:51.01:811,51,0	1/1:4,4:12:15.05:475,15,0	1/1:7,19:30:33.62:1655,34,0	1/1:6,13:23:39.13:1076,39,0	0/0:25,0:24:48.15:0,48,951	0/0:12,0:12:30.10:0,30,617	0/0:16,0:16:33.11:0,33,638	0/0:14,0:14:36.07:0,36,778	1/1:2,10:15:21.07:682,21,0	0/0:22,0:22:48.13:0,48,915	1/1:8,12:21:24.08:720,24,0	0/0:22,0:21:39.12:0,39,754	0/0:28,0:27:51.14:0,51,904	0/0:17,0:17:39.12:0,39,758	0/0:9,0:9:27.08:0,27,511	0/0:17,0:17:39.13:0,39,761	0/0:8,0:8:18.06:0,18,370	0/0:16,0:16:27.07:0,27,483	0/1:26,4:31:99:261,0,834	0/0:23,0:23:48.14:0,48,904	0/0:13,0:12:27.08:0,27,518
chr10	65811736	.	GCCT	G	1353.06	PASS	AB=0.711;AC=29;AF=0.558;AN=52;BaseQRankSum=4.625;DP=320;FS=21.190;HRun=0;HaplotypeScore=45.6698;InbreedingCoeff=0.2119;MQ=37.48;MQ0=39;MQRankSum=-4.951;QD=7.31;ReadPosRankSum=2.474;VQSLOD=0.8286;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:26:54.13:0,54,780	0/1:3,1:3:0.03:0,0,0	0/0:3,0:2:3.01:0,3,38	0/0:9,0:5:12.01:0,12,174	0/0:5,0:4:3.01:0,3,53	./.	1/1:6,15:18:23.44:353,23,0	1/1:9,1:4:3.48:50,3,0	0/1:14,5:14:99:167,0,190	1/1:4,3:5:3.01:49,3,0	0/1:3,3:6:7.21:43,0,7	1/1:8,10:13:9.03:147,9,0	0/0:18,0:18:54.18:0,54,929	0/1:2,11:9:39.78:40,0,85	1/1:2,11:8:15.05:244,15,0	0/1:8,7:7:41.54:42,0,43	1/1:2,9:7:3.01:49,3,0	0/1:10,8:8:32.08:32,0,185	1/1:3,2:3:3.01:49,3,0	./.	0/0:13,11:15:1.55:0,2,4	1/1:2,2:3:3.01:49,3,0	0/0:4,0:4:3:0,3,26	0/0:39,0:38:87.94:0,88,1471	1/1:1,2:3:1.36:3,1,0	1/1:4,1:3:3.48:50,3,0	1/1:3,6:6:6.02:100,6,0	0/1:3,1:2:42.96:43,0,47
chr10	65811778	.	TCTGC	T	125.65	PASS	AB=0.819;AC=3;AF=0.071;AN=42;BaseQRankSum=3.562;DP=327;FS=5.843;HRun=0;HaplotypeScore=72.6626;InbreedingCoeff=0.0096;MQ=30.04;MQ0=82;MQRankSum=-1.440;QD=2.03;ReadPosRankSum=0.860;VQSLOD=0.6173;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:5:3.01:0,3,42	./.	./.	./.	./.	0/0:14,0:9:18.06:0,18,258	0/0:30,0:23:36.98:0,37,469	0/0:15,0:3:7.18:0,7,62	0/1:10,1:11:73.26:73,0,121	0/0:12,0:8:19.14:0,19,227	./.	0/0:17,0:12:17.29:0,17,232	0/0:9,0:9:27.05:0,27,515	0/0:12,0:11:21.54:0,22,334	0/0:18,0:16:34.06:0,34,451	0/0:13,1:11:18.36:0,18,271	0/0:11,0:10:24.05:0,24,342	0/1:5,3:11:99:137,0,136	0/0:19,0:3:9.03:0,9,125	./.	0/1:35,0:22:4.41:4,0,77	0/0:10,0:3:0.47:0,0,1	./.	0/0:33,0:31:63.11:0,63,1112	0/0:7,0:5:10.58:0,11,126	0/0:13,0:7:21.07:0,21,296	0/0:10,0:8:8.90:0,9,126	0/0:3,0:2:6.02:0,6,107
chr10	65811800	.	CCT	C	73.78	PASS	AB=0.826;AC=5;AF=0.109;AN=46;BaseQRankSum=6.685;DP=346;FS=14.105;HRun=0;HaplotypeScore=59.5949;InbreedingCoeff=0.2216;MQ=34.48;MQ0=81;MQRankSum=-5.816;QD=1.60;ReadPosRankSum=-0.336;VQSLOD=0.1803;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:7:12.04:0,12,207	./.	./.	./.	0/0:9,0:6:15.05:0,15,268	0/0:15,0:10:14.06:0,14,262	0/0:42,0:28:49.67:0,50,703	0/0:13,0:4:9.03:0,9,140	0/1:8,4:10:5.35:77,0,5	0/1:9,1:6:35.27:35,0,79	./.	0/0:19,0:16:27.68:0,28,427	0/0:12,0:11:33.11:0,33,558	0/0:12,0:11:16.25:0,16,268	0/0:16,0:13:13.99:0,14,253	0/1:7,2:7:44.54:45,0,72	0/0:14,0:13:23.57:0,24,514	1/1:14,1:11:8.27:28,8,0	0/0:16,0:5:11.78:0,12,189	./.	0/0:30,0:21:19.74:0,20,367	0/0:8,0:1:3.01:0,3,50	0/0:6,0:4:6.49:0,6,98	0/0:36,0:33:52.87:0,53,990	0/0:8,0:7:15.03:0,15,245	0/0:14,0:9:23.87:0,24,393	0/0:8,0:7:5.48:0,5,99	0/0:4,0:3:3.01:0,3,54
chr10	65811814	.	CCT	C	401.08	PASS	AB=0.791;AC=6;AF=0.125;AN=48;BaseQRankSum=5.580;DP=356;FS=0.000;HRun=0;HaplotypeScore=61.8295;InbreedingCoeff=0.1556;MQ=40.37;MQ0=66;MQRankSum=-2.889;QD=4.46;ReadPosRankSum=-1.894;VQSLOD=2.0215;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:13:30.10:0,30,527	./.	./.	./.	0/0:8,0:6:15.05:0,15,270	0/0:11,0:7:17.09:0,17,276	0/0:45,0:31:58.14:0,58,1024	0/0:10,0:3:6.02:0,6,108	1/1:9,4:11:8.99:106,9,0	0/1:9,3:7:99:108,0,120	./.	0/0:19,0:16:34.93:0,35,598	0/0:17,0:16:45.13:0,45,732	0/0:11,0:10:18.06:0,18,322	0/0:14,0:10:24.08:0,24,427	0/1:5,8:11:34.40:192,0,34	0/0:18,1:18:12.39:0,12,857	0/1:7,3:6:67.69:107,0,68	0/0:9,0:3:8.99:0,9,128	0/0:4,0:3:9.03:0,9,145	0/0:34,0:25:37.89:0,38,668	0/0:5,0:3:9.03:0,9,162	0/0:8,0:4:9.50:0,10,153	0/1:41,1:39:1.51:2,0,879	0/0:11,0:9:24.07:0,24,428	0/0:10,0:8:20.99:0,21,309	0/0:8,0:8:9.03:0,9,154	0/0:3,0:2:6.02:0,6,107
chr10	65811816	.	T	TCTGC	473.83	PASS	AB=1.000;AC=6;AF=0.125;AN=48;BaseQRankSum=5.216;DP=361;FS=0.000;HRun=0;HaplotypeScore=76.9847;InbreedingCoeff=0.4293;MQ=41.00;MQ0=65;MQRankSum=-3.868;QD=9.67;ReadPosRankSum=-2.705;VQSLOD=1.5756;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:13:30.10:0,30,538	./.	./.	./.	0/0:8,0:6:15.05:0,15,291	0/0:11,0:6:18.06:0,18,340	0/0:46,0:32:60.94:0,61,1085	0/0:9,0:3:6.02:0,6,111	1/1:10,4:13:9.50:166,10,0	0/1:12,0:7:98.66:108,0,99	./.	0/0:19,0:16:36.12:0,36,666	0/0:19,0:18:45.13:0,45,777	0/0:11,0:10:18.02:0,18,337	0/0:15,0:11:26.94:0,27,465	1/1:11,0:9:5.61:198,6,0	0/0:18,0:18:12.40:0,12,897	0/1:11,0:7:9.29:119,0,9	0/0:8,0:3:8.99:0,9,130	0/0:4,0:3:9.03:0,9,148	0/0:35,0:26:37.07:0,37,693	0/0:5,0:3:9.03:0,9,163	0/0:8,0:4:10.28:0,10,163	0/0:44,0:39:8.97:0,9,937	0/0:11,0:9:24.08:0,24,442	0/0:10,0:8:15.44:0,15,286	0/0:8,0:8:9.03:0,9,167	0/0:3,0:2:6.02:0,6,110
chr10	65812599	.	TAA	T	13526.38	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=10.058;DP=655;FS=0.000;HRun=3;HaplotypeScore=82.0051;InbreedingCoeff=0.9985;MQ=91.67;MQ0=0;MQRankSum=-3.338;QD=40.38;ReadPosRankSum=4.776;VQSLOD=4.3024;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:30:93.31:0,93,1733	1/1:1,11:12:27.09:413,27,0	0/0:30,0:30:87.26:0,87,1583	0/0:23,0:23:66.13:0,66,1121	0/0:20,0:20:60.19:0,60,1116	1/1:2,19:21:57.19:872,57,0	1/1:2,33:35:90.31:1376,90,0	0/0:20,0:20:57.20:0,57,1068	0/0:28,0:28:84.29:0,84,1623	0/0:20,0:20:60.21:0,60,1159	0/0:11,0:11:30.10:0,30,563	1/1:1,19:20:57.19:873,57,0	0/0:19,0:19:57.20:0,57,1100	1/1:0,24:24:69.23:1056,69,0	1/1:1,42:43:99:1745,114,0	0/0:29,0:28:84.28:0,84,1583	1/1:0,33:33:87.30:1331,87,0	0/0:30,0:30:90.31:0,90,1729	1/1:1,8:9:23.87:333,24,0	1/1:0,10:10:24.08:367,24,0	1/1:0,32:32:90.31:1377,90,0	1/1:0,17:17:42.14:643,42,0	0/0:21,0:21:60.19:0,60,1108	0/0:38,0:38:99:0,108,2016	1/1:0,20:20:57.19:873,57,0	1/1:3,17:20:20.25:661,20,0	1/1:0,28:28:75.25:1148,75,0	1/1:0,11:11:30.10:459,30,0
chr10	65813515	.	GAACCCTC	G	6137.54	PASS	AB=0.767;AC=10;AF=0.179;AN=56;BaseQRankSum=12.912;DP=737;FS=9.285;HRun=0;HaplotypeScore=171.6662;InbreedingCoeff=0.7558;MQ=90.49;MQ0=0;MQRankSum=-13.600;QD=46.85;ReadPosRankSum=1.784;VQSLOD=4.3499;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,144,5730	0/0:11,0:11:33.11:0,33,1307	0/0:32,0:32:93.21:0,93,3612	0/0:31,0:31:87.30:0,87,3107	0/0:26,0:26:75.26:0,75,3072	0/0:26,0:26:78.26:0,78,3095	0/0:24,0:24:72.25:0,72,2855	0/0:32,0:31:96.33:0,96,3888	1/1:1,26:27:72.25:1926,72,0	1/1:4,14:18:42.14:1104,42,0	1/1:2,14:16:23.75:646,24,0	0/0:25,0:25:75.26:0,75,3001	0/0:25,0:25:75.26:0,75,3053	0/0:29,0:29:87.30:0,87,3429	0/0:32,0:32:93.32:0,93,3662	1/1:0,24:24:63.22:1697,63,0	0/0:40,0:40:99:0,114,4598	0/1:6,12:18:99:684,0,206	0/0:30,0:30:84.29:0,84,3404	0/0:17,0:17:51.18:0,51,2086	0/0:64,0:64:99:0,187,7339	0/0:20,0:20:60.21:0,60,2397	0/0:15,0:15:42.14:0,42,1700	0/0:31,0:31:90.31:0,90,3585	0/0:17,0:17:51.18:0,51,2075	0/1:26,2:28:80.43:80,0,2914	0/0:20,0:20:60.19:0,60,2333	0/0:11,0:11:33.11:0,33,1328
chr10	65814493	.	CGTGTGTGTGTGTGTGTGTGTGTGT	C	12265.37	PASS	AB=0.805;AC=27;AF=0.482;AN=56;BaseQRankSum=9.861;DP=609;FS=27.423;HRun=0;HaplotypeScore=341.2789;InbreedingCoeff=0.7018;MQ=60.81;MQ0=10;MQRankSum=-8.465;QD=44.76;ReadPosRankSum=2.180;VQSLOD=2.4051;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:52:99:0,99,6094	1/1:3,4:7:9.03:567,9,0	0/0:33,0:17:12.04:0,12,457	0/0:37,0:21:36.12:0,36,1482	0/0:24,0:30:35.93:0,36,1949	1/1:4,6:11:12.04:734,12,0	1/1:18,8:26:11.23:732,11,0	0/0:18,0:18:30.10:0,30,1416	0/0:29,0:29:21.28:0,21,1011	0/0:14,0:14:33.09:0,33,1380	0/0:5,0:5:3:0,3,25	1/1:17,7:24:18.06:1133,18,0	0/0:12,0:13:23.67:0,24,2084	1/1:7,10:17:18.06:1106,18,0	1/1:19,7:27:18.06:1077,18,0	0/0:23,0:23:21.49:0,21,482	1/1:18,4:22:9.03:567,9,0	0/0:27,0:27:51.13:0,51,2210	0/1:12,4:15:72.08:483,0,72	1/1:11,4:15:9.03:566,9,0	0/1:29,9:38:92.54:353,0,93	1/1:6,10:16:24.55:1498,25,0	0/0:12,0:12:26.80:0,27,2050	0/0:40,0:41:99:0,105,9247	1/1:6,12:18:21.07:1315,21,0	0/1:16,5:21:99:811,0,216	1/1:5,7:12:15.05:945,15,0	1/1:2,2:4:6.02:378,6,0
chr10	65816869	.	G	GT	1011.98	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-8.469;DP=640;FS=22.433;HRun=8;HaplotypeScore=60.7148;InbreedingCoeff=0.9991;MQ=86.48;MQ0=0;MQRankSum=-3.539;QD=24.09;ReadPosRankSum=-3.315;VQSLOD=1.4607;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:78:0,78,702	0/0:15,0:15:35.99:0,36,324	0/0:24,0:24:46.27:0,46,471	0/0:25,0:25:47.98:0,48,431	0/0:37,0:37:96.01:0,96,871	0/0:27,0:27:75.04:0,75,686	0/0:19,0:19:44.99:0,45,406	1/1:9,33:42:96.28:1107,96,0	0/0:26,1:27:43.42:0,43,652	0/0:30,0:30:81.03:0,81,737	0/0:14,0:14:36.02:0,36,329	0/0:16,0:16:42.01:0,42,384	0/0:13,0:13:33.02:0,33,302	0/0:19,0:19:48.02:0,48,439	0/0:17,0:17:48.02:0,48,439	0/0:25,0:25:69.04:0,69,631	0/0:18,0:18:45.02:0,45,412	0/0:19,0:19:48.02:0,48,439	0/0:20,0:20:48.02:0,48,439	0/0:27,0:27:78.01:0,78,704	0/0:30,1:31:46.41:0,46,679	0/0:22,0:22:35.55:0,36,497	0/0:22,0:22:54.01:0,54,494	0/0:17,0:17:42.02:0,42,384	0/0:16,0:16:39.02:0,39,357	0/0:28,0:28:75.04:0,75,686	0/0:24,0:24:47.94:0,48,428	0/0:17,0:17:45.02:0,45,412
chr10	65818032	.	C	CCT	19946.67	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-4.950;DP=519;FS=6.693;HRun=0;HaplotypeScore=86.9193;InbreedingCoeff=0.9745;MQ=74.41;MQ0=0;MQRankSum=-2.922;QD=53.33;ReadPosRankSum=0.316;VQSLOD=4.6941;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,114,1852	1/1:3,3:6:18.06:339,18,0	0/0:10,0:10:21.07:0,21,329	0/0:12,0:12:33.11:0,33,508	0/0:12,0:12:30.10:0,30,489	1/1:4,12:16:48.15:908,48,0	1/1:2,26:29:72.25:1441,72,0	0/0:14,0:14:39.13:0,39,629	1/1:4,21:25:66.18:1297,66,0	1/1:3,18:21:59.85:1163,60,0	1/1:1,3:4:5.98:81,6,0	1/1:1,20:21:60.21:1209,60,0	0/0:15,0:15:45.15:0,45,733	1/1:0,23:23:66.23:1339,66,0	1/1:5,14:19:48.16:920,48,0	1/1:2,10:12:33.10:633,33,0	1/1:3,31:35:99:1979,99,0	1/1:0,22:22:66.23:1340,66,0	1/1:1,8:9:27.09:545,27,0	1/1:0,7:7:15.01:264,15,0	1/1:5,45:53:99:2679,135,0	1/1:2,14:16:41.90:852,42,0	0/0:6,0:6:15.05:0,15,245	0/0:37,0:37:99:0,105,1705	1/1:1,12:13:36.12:728,36,0	1/1:3,16:21:49.05:969,49,0	1/1:0,14:14:42.11:813,42,0	1/1:1,7:8:24.06:449,24,0
chr10	65818116	.	T	TCAC	4645.45	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=13.384;DP=672;FS=6.091;HRun=0;HaplotypeScore=124.1216;InbreedingCoeff=0.8613;MQ=85.84;MQ0=0;MQRankSum=-13.690;QD=45.54;ReadPosRankSum=0.424;VQSLOD=6.8196;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,141,2561	0/0:8,0:8:21.07:0,21,390	0/0:24,0:24:69.17:0,69,1120	0/0:27,0:27:68.36:0,68,1099	0/0:16,0:16:39.13:0,39,687	0/0:23,0:23:66.21:0,66,1198	0/0:33,0:33:99:0,99,1812	0/1:19,0:19:50.88:305,0,51	1/1:1,27:28:75.26:1590,75,0	1/1:8,8:16:47.09:676,47,0	1/1:2,3:6:6.02:103,6,0	0/0:32,0:32:90.23:0,90,1608	0/0:25,0:25:69.21:0,69,1211	0/0:26,0:26:75.23:0,75,1329	0/0:24,0:24:69.22:0,69,1254	1/1:1,21:22:60.21:1305,60,0	0/0:32,0:32:90.25:0,90,1608	1/1:1,10:11:33.04:667,33,0	0/0:25,0:24:72.24:0,72,1302	0/0:15,0:15:42.14:0,42,781	0/0:66,0:66:99:0,190,3434	0/0:17,0:17:48.15:0,48,861	0/0:13,0:13:36.12:0,36,651	0/0:42,0:42:99:0,123,2247	0/0:13,0:13:33.11:0,33,597	0/0:30,0:30:87.28:0,87,1564	0/0:18,0:18:54.18:0,54,975	0/0:13,0:13:30.04:0,30,491
chr10	65818121	.	C	CAGT	6023.89	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=12.635;DP=688;FS=7.387;HRun=0;HaplotypeScore=128.9103;InbreedingCoeff=0.9873;MQ=82.46;MQ0=0;MQRankSum=-13.205;QD=54.27;ReadPosRankSum=-0.978;VQSLOD=6.4729;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,135,2248	0/0:9,0:9:24.06:0,24,381	0/0:22,0:22:66.08:0,66,1024	0/0:24,0:24:62.60:0,63,878	0/0:16,0:16:35.88:0,36,504	0/0:26,0:26:78.21:0,78,1220	0/0:33,0:33:93.28:0,93,1530	1/1:5,16:22:66.19:1288,66,0	1/1:29,0:29:81.26:1739,81,0	1/1:17,0:17:36.08:695,36,0	1/1:6,0:7:8.95:127,9,0	0/0:32,0:32:84.29:0,84,1426	0/0:24,0:24:69.22:0,69,1142	0/0:27,0:27:75.17:0,75,1245	0/0:25,0:25:69.24:0,69,1153	1/1:23,0:23:63.22:1409,63,0	0/0:33,0:33:87.26:0,87,1444	1/1:13,0:13:36.10:764,36,0	0/0:24,0:23:66.19:0,66,1072	0/0:15,0:15:42.14:0,42,702	0/0:66,0:66:99:0,184,3085	0/0:18,0:18:54.03:0,54,839	0/0:13,0:13:33.10:0,33,510	0/0:45,0:45:99:0,123,2011	0/0:16,0:16:36.04:0,36,518	0/0:28,0:28:81.28:0,81,1369	0/0:17,0:17:51.17:0,51,868	0/0:16,0:16:39.06:0,39,607
chr10	65818187	.	CT	C	509.99	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.735;DP=705;FS=3.131;HRun=3;HaplotypeScore=87.5374;InbreedingCoeff=0.9697;MQ=73.51;MQ0=0;MQRankSum=-0.807;QD=30.00;ReadPosRankSum=2.259;VQSLOD=3.5566;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:56:99:0,157,2244	0/0:7,0:7:18.06:0,18,259	0/0:13,0:14:34.79:0,35,513	0/0:15,0:15:28.46:0,28,374	0/0:18,0:18:29.96:0,30,408	0/0:22,0:22:66.22:0,66,946	0/0:32,0:32:93.26:0,93,1299	0/0:27,0:27:81.23:0,81,1139	0/0:26,0:26:75.17:0,75,1030	0/0:21,0:21:60.19:0,60,837	0/0:9,0:9:15.05:0,15,216	0/0:36,0:36:99:0,105,1470	0/0:30,0:30:87.26:0,87,1230	0/0:27,0:27:81.25:0,81,1122	0/0:25,0:25:72.24:0,72,1027	0/0:24,0:24:72.17:0,72,991	0/0:48,0:48:99:0,138,1968	1/1:0,17:17:51.15:605,51,0	0/0:22,0:22:63.21:0,63,906	0/0:7,0:7:21.07:0,21,302	0/0:62,0:62:99:0,184,2575	0/0:21,0:21:45.07:0,45,601	0/0:11,0:11:24.07:0,24,318	0/0:46,0:45:99:0,135,1943	0/0:18,0:18:51.17:0,51,728	0/0:24,0:24:72.19:0,72,996	0/0:20,0:20:60.20:0,60,863	0/0:20,0:20:60.20:0,60,864
chr10	65818500	.	TCCAC	T	440.72	PASS	AB=0.990;AC=15;AF=0.288;AN=52;BaseQRankSum=-0.480;DP=1468;FS=7.032;HRun=0;HaplotypeScore=152.0970;InbreedingCoeff=-0.3327;MQ=18.70;MQ0=435;MQRankSum=-1.551;QD=0.57;ReadPosRankSum=-4.099;VQSLOD=0.7118;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:80,0:38:5.69:0,6,598	0/0:25,0:15:5.99:0,6,108	./.	./.	0/0:32,2:25:15.52:0,16,401	0/0:57,0:25:15.23:0,15,307	0/1:73,0:25:22.12:40,0,22	0/1:61,0:8:10.38:33,0,10	0/1:82,0:33:2.34:2,0,187	0/1:48,0:22:58.78:59,0,112	1/1:15,0:11:0.95:2,1,0	0/1:70,0:24:47.12:47,0,124	0/0:60,0:24:0.23:0,0,508	0/1:91,0:38:10.93:11,0,295	0/0:85,0:37:17.75:0,18,251	0/1:50,6:27:99:279,0,256	0/1:49,1:14:14.14:14,0,47	0/0:39,0:14:3.60:0,4,141	0/0:30,0:6:5.91:0,6,88	0/1:33,0:22:14.53:15,0,100	0/0:165,0:25:4.83:0,5,46	0/1:54,1:32:31.17:31,0,53	0/0:25,0:14:4.83:0,5,36	0/0:60,0:33:22.10:0,22,209	0/1:44,0:28:13.85:14,0,129	0/1:61,0:22:22.12:22,0,257	0/1:30,0:11:7.49:7,0,84	0/0:29,0:13:24.58:0,25,254
chr10	65818584	.	TCCAC	T	354.02	PASS	AB=0.985;AC=10;AF=0.200;AN=50;BaseQRankSum=2.990;DP=1594;DS;FS=1.973;HRun=0;HaplotypeScore=108.5915;InbreedingCoeff=-0.0405;MQ=17.90;MQ0=569;MQRankSum=-3.262;QD=0.74;ReadPosRankSum=-2.999;VQSLOD=1.5597;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:81,1:29:26.50:0,27,421	0/0:15,0:3:0.47:0,0,1	./.	./.	0/0:27,1:16:9.03:0,9,214	0/0:63,0:19:20.55:0,21,310	./.	0/0:67,1:4:8.88:0,9,76	0/0:103,0:34:26.46:0,26,401	0/1:45,3:20:97.94:200,0,98	1/1:11,2:8:2.72:63,3,0	0/0:67,0:21:5.33:0,5,369	0/0:71,1:24:17.02:0,17,705	0/0:95,0:37:9.96:0,10,533	0/1:100,0:32:2.98:3,0,178	0/1:77,0:18:59.10:59,0,78	0/1:74,0:22:0.03:0,0,235	0/0:44,0:18:21.35:0,21,293	0/0:37,0:6:9.79:0,10,145	0/1:23,1:16:50.68:51,0,62	0/0:214,2:43:0.84:0,1,3	0/1:35,0:10:30.78:31,0,114	0/0:22,1:10:6.49:0,6,107	0/0:84,0:35:33.09:0,33,713	0/1:43,1:20:18.10:46,0,18	0/1:66,0:22:25.60:26,0,343	0/0:32,0:10:9.03:0,9,191	0/0:18,0:7:6:0,6,65
chr10	65818733	.	C	CTTCT	1844.22	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=6.163;DP=616;FS=81.613;HRun=0;HaplotypeScore=184.0356;InbreedingCoeff=0.9172;MQ=54.50;MQ0=11;MQRankSum=-8.727;QD=46.11;ReadPosRankSum=-1.349;VQSLOD=0.7012;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:35:96.07:0,96,1685	0/0:3,0:3:3.01:0,3,53	0/0:20,0:14:28.12:0,28,515	0/0:35,0:21:50.23:0,50,642	0/0:20,0:19:20.94:0,21,366	0/0:27,0:27:51.16:0,51,855	0/0:26,0:26:63.22:0,63,1121	0/0:24,0:22:60.12:0,60,988	1/1:1,3:6:18.06:327,18,0	1/1:3,5:8:24.05:521,24,0	1/1:1,6:6:12.04:205,12,0	0/0:19,0:15:24.08:0,24,427	0/0:26,0:24:63.21:0,63,1097	0/0:28,0:25:54.18:0,54,957	0/0:33,0:31:66.20:0,66,1115	1/1:2,6:8:23.26:472,23,0	0/0:38,0:37:99:0,99,1677	1/1:2,8:10:6.11:485,6,0	0/0:22,0:19:42.11:0,42,701	0/0:21,0:20:39.09:0,39,660	0/0:42,0:39:92.42:0,92,1551	0/0:19,0:19:39.12:0,39,665	0/0:13,0:12:17.91:0,18,291	0/0:41,0:41:93.22:0,93,1546	0/0:15,0:14:33.11:0,33,570	0/0:36,1:34:13.50:0,14,1404	0/0:16,0:16:36.12:0,36,637	0/0:12,0:12:33.09:0,33,557
chr10	65818752	.	CTCCTTCCT	C	848.60	PASS	AB=0.949;AC=8;AF=0.143;AN=56;BaseQRankSum=2.157;DP=581;FS=36.460;HRun=0;HaplotypeScore=220.4866;InbreedingCoeff=0.5968;MQ=53.50;MQ0=4;MQRankSum=-5.999;QD=12.67;ReadPosRankSum=-1.401;VQSLOD=1.3681;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:72.23:0,72,2699	0/0:5,0:4:2.63:0,3,89	0/0:18,0:13:12.04:0,12,353	0/0:21,0:15:3.90:0,4,119	0/0:21,0:21:18.06:0,18,675	0/0:25,0:25:42.14:0,42,1082	0/0:30,0:30:37.82:0,38,929	0/0:27,0:24:18.06:0,18,568	0/0:9,0:15:33.11:0,33,1037	1/1:2,6:8:24.08:608,24,0	1/1:3,4:6:9.03:211,9,0	0/0:18,0:17:45.15:0,45,1200	0/0:25,0:25:42.09:0,42,1480	0/0:24,0:21:35.92:0,36,995	0/0:29,0:27:60:0,60,1395	1/1:6,1:7:8.96:104,9,0	0/0:34,0:33:69.17:0,69,1846	0/1:12,0:13:28.63:58,0,29	0/0:17,0:14:18.06:0,18,438	0/0:23,0:22:40.99:0,41,1066	0/0:30,0:30:40.17:0,40,990	0/0:19,0:19:30.09:0,30,763	0/0:15,0:15:24.03:0,24,794	0/0:38,0:38:63.20:0,63,2266	0/0:15,0:14:33.11:0,33,903	0/1:31,1:32:9.87:10,0,1643	0/0:19,0:18:39.09:0,39,929	0/0:11,0:10:27.09:0,27,718
chr10	65818980	.	T	TG	977.44	PASS	AB=0.909;AC=11;AF=0.196;AN=56;BaseQRankSum=-0.020;DP=398;FS=1.817;HRun=2;HaplotypeScore=75.2655;InbreedingCoeff=0.8343;MQ=60.54;MQ0=10;MQRankSum=-0.932;QD=12.69;ReadPosRankSum=2.146;VQSLOD=2.6369;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:25:50.71:0,51,475	0/0:6,0:6:14.95:0,15,126	0/1:9,0:6:16.79:25,0,17	0/0:12,0:9:3.98:0,4,92	0/0:14,0:11:23.84:0,24,234	0/0:13,0:13:23.71:0,24,227	0/0:15,0:14:29.98:0,30,264	0/0:28,0:26:53.87:0,54,306	1/1:16,4:20:41.87:414,42,0	1/1:12,0:11:23.02:132,23,0	1/1:7,0:7:17.41:107,17,0	0/0:14,0:14:26.87:0,27,223	0/0:10,0:10:23.81:0,24,204	0/0:9,0:9:23.85:0,24,186	0/0:10,0:10:20.95:0,21,176	1/1:12,0:12:29.55:189,30,0	0/0:32,0:32:74.61:0,75,640	1/1:16,0:16:44.24:288,44,0	0/0:18,0:17:38.89:0,39,325	0/0:8,0:7:14.89:0,15,117	0/0:17,0:17:38.87:0,39,322	0/0:9,0:7:20.75:0,21,171	0/0:11,0:10:21.88:0,22,216	0/0:14,0:13:29.61:0,30,315	0/0:7,0:5:9:0,9,80	0/0:21,0:21:19.72:0,20,343	0/0:14,0:14:38.98:0,39,334	0/0:12,0:12:32.91:0,33,270
chr10	65818982	.	GAA	G	2784.99	PASS	AB=0.627;AC=34;AF=0.607;AN=56;BaseQRankSum=-0.304;DP=416;FS=0.470;HRun=15;HaplotypeScore=71.9442;InbreedingCoeff=0.6740;MQ=60.87;MQ0=9;MQRankSum=1.002;QD=10.84;ReadPosRankSum=4.839;VQSLOD=2.4294;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,1:28:35.83:0,36,612	1/1:0,6:6:15:132,15,0	0/0:11,0:7:4.66:0,5,79	0/0:12,0:9:16.64:0,17,149	0/0:18,0:15:33.08:0,33,414	1/1:5,6:13:17.41:129,17,0	1/1:3,11:13:25.81:236,26,0	0/0:25,0:25:50.51:0,51,367	0/0:19,0:20:43.15:0,43,410	0/1:5,0:11:0.84:10,0,1	1/1:2,0:7:1.96:8,2,0	1/1:2,11:14:20.63:170,21,0	0/0:9,0:10:11.99:0,12,212	0/1:4,7:12:9.22:76,0,9	1/1:1,8:10:8.80:123,9,0	0/1:5,0:12:22.87:26,0,23	1/1:3,23:33:64.56:507,65,0	1/1:4,6:16:15.56:115,16,0	1/1:6,9:17:18.21:267,18,0	0/1:4,1:8:9.32:18,0,9	1/1:5,10:16:32.30:260,32,0	1/1:1,6:8:17.63:144,18,0	0/0:12,0:14:22.86:0,23,260	0/0:15,0:15:26.30:0,26,282	1/1:1,6:6:8.98:79,9,0	1/1:5,12:21:35.31:281,35,0	1/1:3,11:14:29.93:263,30,0	1/1:5,7:13:17.59:144,18,0
chr10	65818988	.	A	AG	534.44	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-4.557;DP=454;FS=5.744;HRun=0;HaplotypeScore=84.7361;InbreedingCoeff=0.8866;MQ=62.02;MQ0=9;MQRankSum=-0.679;QD=22.27;ReadPosRankSum=0.141;VQSLOD=5.0525;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:71.87:0,72,732	0/0:8,0:8:20.92:0,21,164	0/0:14,0:8:6.11:0,6,146	0/0:15,0:10:20.87:0,21,194	0/0:19,0:16:44.94:0,45,481	0/0:14,0:14:32.85:0,33,254	0/0:13,0:12:29.86:0,30,229	1/1:5,19:22:57.02:629,57,0	0/0:18,0:18:39.45:0,39,323	0/0:13,0:12:29.85:0,30,232	0/0:12,0:12:32.77:0,33,250	0/0:14,0:14:29.77:0,30,218	0/0:9,0:9:26.95:0,27,265	0/0:14,0:14:26.83:0,27,209	0/0:14,0:14:35.78:0,36,266	0/0:16,0:16:47.80:0,48,378	0/0:31,0:31:72.53:0,73,543	0/0:16,0:16:41.83:0,42,328	0/0:21,0:21:53.77:0,54,414	0/0:12,0:11:23.80:0,24,173	0/0:17,0:17:50.83:0,51,402	0/0:14,0:13:38.80:0,39,299	0/0:15,0:14:27.87:0,28,291	0/0:16,0:15:36.45:0,36,394	0/0:11,0:9:17.91:0,18,137	0/0:26,0:26:74.66:0,75,583	0/0:15,0:15:38.89:0,39,311	0/0:14,0:14:35.89:0,36,284
chr10	65819010	.	GC	G	469.67	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.236;DP=483;FS=3.736;HRun=1;HaplotypeScore=84.6788;InbreedingCoeff=0.9942;MQ=79.81;MQ0=0;MQRankSum=-1.643;QD=29.35;ReadPosRankSum=-0.279;VQSLOD=3.2810;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:60.20:0,60,953	0/0:9,0:9:27.09:0,27,420	0/0:20,0:16:42.04:0,42,653	0/0:18,0:16:44.12:0,44,624	0/0:14,0:14:36.12:0,36,574	0/0:13,0:13:33.11:0,33,527	0/0:20,0:20:57.19:0,57,902	0/0:28,0:28:84.26:0,84,1280	1/1:0,15:16:45.10:565,45,0	0/0:15,0:15:42.12:0,42,615	0/0:15,0:15:39.12:0,39,589	0/0:12,0:12:27.09:0,27,428	0/0:11,0:11:33.10:0,33,503	0/0:20,0:20:48.15:0,48,740	0/0:13,0:13:36.12:0,36,554	0/0:11,0:11:30.10:0,30,478	0/0:30,0:30:78.71:0,79,1201	0/0:8,0:8:24.08:0,24,384	0/0:21,0:21:60.14:0,60,889	0/0:16,0:16:42.14:0,42,671	0/0:26,0:26:69.22:0,69,1078	0/0:18,0:18:51.17:0,51,802	0/0:20,0:20:42.13:0,42,648	0/0:16,0:16:42.10:0,42,639	0/0:13,0:13:36.12:0,36,575	0/0:25,0:25:75.24:0,75,1177	0/0:17,0:17:48.15:0,48,739	0/0:14,0:14:36.12:0,36,570
chr10	65819495	.	CTG	C	9514.21	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=11.575;DP=616;FS=0.000;HRun=0;HaplotypeScore=82.5908;InbreedingCoeff=0.9210;MQ=67.44;MQ0=9;MQRankSum=-1.017;QD=25.10;ReadPosRankSum=1.843;VQSLOD=5.5488;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:72.25:0,72,1162	1/1:2,4:6:9.03:110,9,0	0/0:49,0:15:25.43:0,25,314	0/0:43,0:13:17.77:0,18,189	0/0:29,2:31:4.93:0,5,1093	1/1:2,11:13:30.09:367,30,0	1/1:4,18:23:42.13:513,42,0	1/1:13,0:31:39.77:196,40,0	1/1:0,0:15:39.77:195,40,0	1/1:8,14:22:3.74:472,4,0	1/1:0,18:19:57.14:671,57,0	1/1:2,10:12:24.07:293,24,0	0/0:16,0:16:39.13:0,39,633	1/1:1,14:15:38.95:454,39,0	1/1:5,11:16:30.09:367,30,0	1/1:2,10:12:30.09:367,30,0	1/1:6,17:23:48.15:586,48,0	0/0:32,1:33:56.60:0,57,1382	1/1:4,13:17:39.12:477,39,0	1/1:6,14:20:39.12:477,39,0	1/1:1,13:14:36.11:440,36,0	1/1:0,13:14:41.96:491,42,0	0/0:17,0:17:45.13:0,45,685	0/0:15,1:16:5.47:0,5,592	1/1:1,20:22:50.99:601,51,0	1/1:2,29:31:84.10:1004,84,0	1/1:2,23:28:74.73:848,75,0	1/1:6,18:24:48.15:587,48,0
chr10	65820021	.	C	CTTT	5355.10	PASS	AB=0.889;AC=44;AF=0.786;AN=56;BaseQRankSum=1.297;DP=546;FS=9.657;HRun=16;HaplotypeScore=115.4551;InbreedingCoeff=0.7676;MQ=56.76;MQ0=1;MQRankSum=-5.726;QD=11.90;ReadPosRankSum=-6.840;VQSLOD=-0.5434;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:32:18.18:0,18,202	1/1:8,0:8:9.03:119,9,0	0/1:11,0:12:12.95:36,0,13	0/0:6,0:5:11.84:0,12,85	0/0:19,0:25:24.69:0,25,334	1/1:10,0:17:11.83:130,12,0	1/1:11,0:20:14.71:106,15,0	1/1:37,0:29:29.20:331,29,0	1/1:8,0:8:12.04:165,12,0	1/1:13,1:18:17.99:197,18,0	1/1:14,0:14:16.85:152,17,0	1/1:13,0:12:17.98:189,18,0	0/0:14,0:16:7.49:0,7,61	1/1:14,0:14:29.03:314,29,0	1/1:7,11:18:13.56:136,14,0	1/1:12,6:18:21.03:233,21,0	1/1:32,0:35:50.88:572,51,0	1/1:27,0:26:43.22:502,43,0	1/1:20,0:30:26.78:317,27,0	1/1:10,10:21:40.55:491,41,0	1/1:11,8:20:16.56:173,17,0	1/1:7,0:12:12.03:86,12,0	0/1:14,0:17:0.78:1,0,36	0/0:10,0:17:12.71:0,13,104	1/1:13,8:23:16.47:112,16,0	1/1:25,0:24:48.63:536,49,0	1/1:17,0:17:24.11:254,24,0	1/1:10,0:21:17.98:202,18,0
chr10	65820877	.	A	ACC	14780.67	PASS	AB=0.964;AC=43;AF=0.768;AN=56;BaseQRankSum=5.586;DP=708;FS=6.397;HRun=6;HaplotypeScore=113.0359;InbreedingCoeff=0.9320;MQ=77.70;MQ0=0;MQRankSum=-3.568;QD=28.05;ReadPosRankSum=2.791;VQSLOD=3.8230;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,141,1679	1/1:0,9:9:24.08:405,24,0	0/0:29,0:28:64.96:0,65,729	0/1:26,0:24:3.14:3,0,313	0/0:33,0:33:96.30:0,96,1170	1/1:2,28:31:72.25:1212,72,0	1/1:5,21:28:60.20:992,60,0	1/1:5,0:31:59.81:239,60,0	1/1:2,0:25:50.38:177,50,0	1/1:3,0:18:19.06:95,19,0	1/1:1,0:18:39.78:140,40,0	1/1:1,15:17:36.12:609,36,0	0/0:21,0:21:54.16:0,54,657	1/1:0,20:20:54.18:913,54,0	1/1:3,24:27:60.01:1015,60,0	1/1:2,0:21:42.15:148,42,0	1/1:3,34:36:90.31:1522,90,0	1/1:2,0:24:52.40:184,52,0	1/1:3,12:15:39.11:614,39,0	1/1:4,20:25:57.19:945,57,0	1/1:5,33:38:75.26:1269,75,0	1/1:4,19:25:45.15:761,45,0	0/0:23,0:23:57.16:0,57,683	0/0:24,0:24:57.16:0,57,695	1/1:4,23:28:57.19:956,57,0	1/1:4,24:29:75.26:1262,75,0	1/1:3,17:19:48.12:812,48,0	1/1:2,12:14:30.10:507,30,0
chr10	65820983	.	CT	C	756.43	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.804;DP=659;FS=0.000;HRun=2;HaplotypeScore=67.5338;InbreedingCoeff=0.9969;MQ=89.24;MQ0=0;MQRankSum=-0.565;QD=28.02;ReadPosRankSum=2.294;VQSLOD=3.1900;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,144,2136	0/0:13,0:13:39.12:0,39,565	0/0:25,0:25:68.95:0,69,880	0/0:24,0:24:53.44:0,53,895	0/0:18,0:18:54.18:0,54,807	0/0:21,0:21:60.16:0,60,872	0/0:34,0:34:99:0,102,1464	0/0:23,0:23:66.19:0,66,904	1/1:1,26:27:27.30:851,27,0	0/0:30,0:30:90.30:0,90,1338	0/0:23,0:23:63.20:0,63,924	0/0:25,0:25:75.25:0,75,1118	0/0:16,0:16:48.16:0,48,719	0/0:19,0:19:54.17:0,54,781	0/0:24,0:24:72.23:0,72,1054	0/0:21,0:21:60.20:0,60,898	0/0:32,0:32:96.33:0,96,1436	0/0:16,0:16:48.13:0,48,694	0/0:10,0:10:27.09:0,27,405	0/0:27,0:27:81.26:0,81,1176	0/0:42,0:42:99:0,123,1782	0/0:20,0:20:57.16:0,57,795	0/0:20,0:20:60.19:0,60,876	0/0:26,0:26:78.25:0,78,1144	0/0:9,0:9:27.09:0,27,404	0/0:21,0:21:60.19:0,60,862	0/0:30,0:30:90.30:0,90,1343	0/0:14,0:14:42.14:0,42,628
chr10	65821266	.	TTGATC	T	1667.32	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.566;DP=590;FS=6.120;HRun=0;HaplotypeScore=106.4099;InbreedingCoeff=0.9984;MQ=86.22;MQ0=0;MQRankSum=-6.909;QD=59.55;ReadPosRankSum=-3.302;VQSLOD=3.1001;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,111,3383	0/0:13,0:13:39.12:0,39,1118	0/0:22,0:22:66.23:0,66,1848	0/0:17,0:17:51.04:0,51,1350	0/0:29,0:29:87.30:0,87,2721	0/0:23,0:23:69.24:0,69,2171	0/0:13,0:13:39.13:0,39,1186	1/1:1,27:28:81.28:1762,81,0	0/0:18,0:18:54.19:0,54,1688	0/0:21,0:21:63.22:0,63,1984	0/0:31,0:31:90.31:0,90,2809	0/0:12,0:12:36.12:0,36,1136	0/0:13,0:13:39.13:0,39,1232	0/0:13,0:13:39.13:0,39,1222	0/0:12,0:12:36.12:0,36,1119	0/0:15,0:15:45.15:0,45,1424	0/0:32,0:32:96.31:0,96,2845	0/0:23,0:23:69.24:0,69,2181	0/0:22,0:22:63.22:0,63,1967	0/0:27,0:27:81.28:0,81,2542	0/0:21,0:21:60.20:0,60,1838	0/0:26,0:26:75.26:0,75,2296	0/0:27,0:27:81.28:0,81,2456	0/0:15,0:15:45.15:0,45,1396	0/0:26,0:26:78.27:0,78,2312	0/0:18,0:18:54.19:0,54,1640	0/0:27,0:27:78.27:0,78,2468	0/0:9,0:9:27.09:0,27,853
chr10	65821938	.	A	AC	3856.64	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-8.191;DP=725;FS=6.553;HRun=4;HaplotypeScore=99.4493;InbreedingCoeff=0.9976;MQ=82.04;MQ0=0;MQRankSum=-1.424;QD=36.04;ReadPosRankSum=2.927;VQSLOD=3.2381;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,105,1181	0/0:10,0:10:27.08:0,27,306	0/0:29,0:29:78.22:0,78,882	0/0:14,0:14:30.08:0,30,340	0/0:31,0:31:84.22:0,84,941	0/0:20,0:20:60.14:0,60,666	0/0:41,0:41:99:0,108,1203	0/0:31,0:31:75.20:0,75,842	1/1:2,31:33:90.30:1231,90,0	1/1:3,16:19:51.17:698,51,0	1/1:1,11:12:30.10:410,30,0	0/0:33,0:33:87.24:0,87,979	0/0:27,0:27:78.22:0,78,884	0/0:32,0:32:93.26:0,93,1055	0/0:22,0:22:66.17:0,66,739	1/1:0,22:22:66.22:903,66,0	0/0:46,0:46:99:0,126,1404	1/1:3,18:21:45.15:616,45,0	0/0:16,0:16:45.09:0,45,484	0/0:22,0:22:63.18:0,63,715	0/0:42,0:42:99:0,120,1361	0/0:21,0:21:54.15:0,54,612	0/0:19,0:19:53.98:0,54,592	0/0:43,0:43:99:0,120,1348	0/0:18,0:18:48.12:0,48,533	0/0:28,1:29:43.18:0,43,869	0/0:29,0:28:87.23:0,87,975	0/0:6,0:6:18.05:0,18,204
chr10	65825504	.	CCATA	C	1002.42	PASS	AB=0.883;AC=8;AF=0.148;AN=54;BaseQRankSum=5.813;DP=510;FS=0.671;HRun=0;HaplotypeScore=142.6518;InbreedingCoeff=0.6500;MQ=75.15;MQ0=0;MQRankSum=-4.330;QD=13.73;ReadPosRankSum=-2.582;VQSLOD=2.7838;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,99,2332	0/0:2,0:2:6.01:0,6,74	0/0:26,0:17:38.89:0,39,708	0/0:41,0:36:41.19:0,41,964	0/0:15,0:15:45.13:0,45,1102	0/0:10,0:10:18.03:0,18,376	0/0:19,0:19:53.89:0,54,1109	./.	1/1:7,5:12:21.06:331,21,0	0/1:14,4:18:99:362,0,188	1/1:11,3:14:11.99:131,12,0	0/0:14,0:14:30.09:0,30,711	0/0:26,0:26:78.22:0,78,1890	0/0:13,0:13:21.05:0,21,509	0/0:20,0:20:54.03:0,54,992	1/1:5,6:11:15.03:289,15,0	0/0:22,0:22:50.06:0,50,949	0/0:19,0:19:42.12:0,42,883	0/0:14,0:14:38.95:0,39,644	0/0:11,0:11:27.03:0,27,431	0/0:47,0:45:70.05:0,70,1422	0/0:16,0:16:36.06:0,36,660	0/0:10,0:10:27.09:0,27,695	0/0:44,0:44:99:0,132,3096	0/0:15,0:15:27.06:0,27,554	0/1:17,1:17:37.60:38,0,765	0/0:5,0:5:12.04:0,12,217	0/0:4,0:4:12.01:0,12,232
chr10	65825531	.	CTGTAGCCCTGGG	C	808.25	PASS	AB=0.915;AC=10;AF=0.192;AN=52;BaseQRankSum=6.560;DP=433;FS=1.769;HRun=0;HaplotypeScore=188.2014;InbreedingCoeff=-0.1057;MQ=69.42;MQ0=6;MQRankSum=-6.099;QD=7.42;ReadPosRankSum=-3.121;VQSLOD=2.1868;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,101,5865	./.	0/0:30,0:14:0.81:0,1,1056	0/0:41,0:28:43.10:0,43,1222	0/0:14,0:14:42.14:0,42,2509	0/0:13,0:13:3.12:0,3,429	0/1:9,3:12:45.75:46,0,1158	./.	0/1:11,3:14:99:159,0,372	0/1:15,0:15:6.23:6,0,763	0/0:7,0:8:4.64:0,5,60	0/1:18,0:18:58.80:59,0,986	0/0:23,0:23:66.21:0,66,3899	0/0:19,0:19:17.45:0,17,1027	0/0:10,2:12:27.09:0,27,1143	0/1:13,0:12:99:139,0,388	0/1:12,1:13:99:181,0,1668	0/1:10,2:12:99:227,0,1031	0/0:9,0:9:20.80:0,21,686	0/0:7,0:7:9.92:0,10,439	0/0:28,2:30:48.60:0,49,1772	0/0:11,2:13:20.90:0,21,1038	0/0:9,0:9:27.09:0,27,1236	0/0:42,1:43:99:0,126,7752	0/0:6,1:7:15.05:0,15,940	0/1:9,1:9:94.10:94,0,1190	1/1:2,0:2:3.01:32,3,0	0/0:3,0:3:9.03:0,9,332
chr10	65825543	.	G	GACACACACACACACACAC	9434.32	PASS	AB=1.000;AC=36;AF=0.667;AN=54;BaseQRankSum=7.319;DP=540;FS=6.407;HRun=0;HaplotypeScore=289.9977;InbreedingCoeff=0.5567;MQ=61.10;MQ0=6;MQRankSum=-8.873;QD=26.50;ReadPosRankSum=-2.449;VQSLOD=2.0483;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:13.87:0,14,2477	1/1:3,0:3:6.01:182,6,0	0/0:35,0:16:19.50:0,19,557	0/1:41,0:26:23.98:24,0,639	0/0:13,0:13:33.11:0,33,1337	1/1:4,9:13:3:136,3,0	1/1:18,0:18:10.93:281,11,0	./.	0/1:13,0:13:3:313,0,3	1/1:21,0:22:53.97:1719,54,0	1/1:20,0:20:0.50:88,0,0	1/1:7,12:22:21.54:924,22,0	0/0:20,0:20:39.09:0,39,1400	1/1:6,11:20:2.99:80,3,0	1/1:23,0:23:16.72:323,17,0	1/1:21,0:21:20.22:1020,20,0	1/1:18,0:17:33.02:916,33,0	0/1:14,0:14:86.96:347,0,87	1/1:8,0:8:20.99:537,21,0	0/1:10,0:9:0.97:14,0,1	1/1:37,0:36:13.59:169,14,0	0/0:21,0:22:1.89:0,2,5	0/0:7,0:7:12.04:0,12,526	0/0:42,0:45:99:0,106,4079	1/1:15,0:15:7.87:152,8,0	1/1:20,0:18:39.10:1130,39,0	1/1:7,0:9:15.05:615,15,0	1/1:7,0:7:15.04:466,15,0
chr10	65825579	.	G	GACAC	2784.73	PASS	AB=0.945;AC=31;AF=0.646;AN=48;BaseQRankSum=-2.542;DP=605;FS=2.398;HRun=0;HaplotypeScore=206.1638;InbreedingCoeff=0.2690;MQ=44.83;MQ0=8;MQRankSum=1.971;QD=6.86;ReadPosRankSum=-1.673;VQSLOD=2.7867;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:36:16.69:0,17,243	1/1:5,0:5:2.80:13,3,0	./.	./.	0/0:17,0:20:14.98:0,15,164	1/1:12,1:13:13.54:208,14,0	1/1:28,3:31:29.04:472,29,0	./.	0/1:21,0:22:38.74:119,0,39	0/1:39,0:41:77.77:187,0,78	0/1:24,0:23:0.20:0,0,0	0/1:19,1:20:3.90:179,0,4	0/0:16,0:16:13.80:0,14,182	1/1:10,1:10:4.83:92,5,0	1/1:19,0:23:7.60:47,8,0	0/1:26,0:25:27.19:27,0,53	0/1:15,2:16:28.40:261,0,28	1/1:12,0:12:2.45:46,2,0	./.	1/1:12,2:14:7.90:151,8,0	1/1:59,1:58:9.08:492,9,0	1/1:22,0:22:2.75:60,3,0	0/0:11,0:11:9.01:0,9,105	0/0:35,0:37:24.43:0,24,315	1/1:14,1:18:4.94:81,5,0	1/1:21,1:20:11.86:148,12,0	0/1:13,0:14:9.82:265,0,10	1/1:3,1:6:8.50:94,8,0
chr10	65825608	.	ACACACACACACACACAC	A	976.80	PASS	AB=0.989;AC=8;AF=0.148;AN=54;BaseQRankSum=5.329;DP=746;FS=16.867;HRun=0;HaplotypeScore=315.9072;InbreedingCoeff=-0.0594;MQ=48.22;MQ0=41;MQRankSum=-5.512;QD=5.06;ReadPosRankSum=-3.282;VQSLOD=0.8438;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:47:99:0,102,4270	0/0:5,0:5:9.03:0,9,356	0/0:28,0:5:15.03:0,15,175	0/0:50,0:16:26.52:0,27,307	0/0:23,0:23:51.17:0,51,2469	0/0:18,0:18:42.01:0,42,1715	0/0:40,0:39:94.75:0,95,3710	./.	0/1:30,0:26:29.05:29,0,515	0/1:52,2:47:99:583,0,1794	1/1:18,2:18:0.07:1,0,0	0/1:19,0:19:8.36:8,0,1496	0/0:18,0:18:45.15:0,45,1829	0/0:13,0:12:27.05:0,27,1170	0/0:25,0:25:4.26:0,4,1102	0/1:29,1:22:99:355,0,560	0/0:23,0:22:17.31:0,17,2253	0/0:18,0:18:9.96:0,10,1327	0/1:23,0:22:66.43:66,0,679	0/0:22,0:21:32.70:0,33,1469	0/0:71,0:69:98.24:0,98,4094	0/0:22,0:22:15:0,15,410	0/0:15,0:15:33.11:0,33,1781	0/0:44,0:41:99:0,99,4299	0/0:28,0:28:40.11:0,40,1140	0/0:31,0:28:4.87:0,5,2258	0/1:17,0:17:54.74:55,0,1176	0/0:8,0:8:20.94:0,21,1146
chr10	65825610	.	ACACACACACACACAC	A	1471.27	PASS	AB=0.980;AC=12;AF=0.222;AN=54;BaseQRankSum=5.676;DP=741;FS=12.091;HRun=0;HaplotypeScore=289.1984;InbreedingCoeff=-0.1703;MQ=48.63;MQ0=41;MQRankSum=-7.511;QD=5.33;ReadPosRankSum=-3.672;VQSLOD=0.6198;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:47:99:0,105,3589	0/0:5,0:5:9.03:0,9,269	0/0:30,0:7:21.06:0,21,262	0/0:48,0:14:23.43:0,23,266	0/0:23,0:23:51.16:0,51,2075	0/0:18,0:18:42.01:0,42,1564	0/0:42,0:41:17.42:0,17,3151	./.	0/1:30,0:26:62:62,0,439	0/1:48,3:44:99:735,0,1396	1/1:21,0:19:1.19:3,1,0	0/1:18,0:18:9.96:10,0,1316	0/0:18,0:18:45.15:0,45,1604	0/0:14,0:13:30.02:0,30,1015	0/0:25,0:25:21.76:0,22,1006	0/1:26,3:21:99:473,0,450	0/0:22,0:21:7.98:0,8,1933	0/0:17,0:17:9.85:0,10,1076	0/1:20,0:19:46.44:46,0,580	0/0:22,0:21:9.59:0,10,1217	0/0:70,0:68:68.37:0,68,3531	0/1:21,0:21:21.91:22,0,341	0/0:16,0:16:36.12:0,36,1526	0/0:44,0:41:99:0,99,3655	0/1:28,0:28:71.50:71,0,955	0/1:31,0:28:10.36:10,0,1877	0/1:16,1:17:99:167,0,1021	0/1:10,0:10:11.10:11,0,1008
chr10	65825624	.	AC	A	1506.60	PASS	AB=0.939;AC=17;AF=0.315;AN=54;BaseQRankSum=5.791;DP=650;FS=4.380;HRun=2;HaplotypeScore=116.3749;InbreedingCoeff=0.2350;MQ=58.21;MQ0=39;MQRankSum=-5.398;QD=4.72;ReadPosRankSum=-3.130;VQSLOD=-0.5001;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:36:75.04:0,75,935	0/1:5,0:5:14.84:15,0,70	0/0:37,0:17:51.11:0,51,582	0/0:47,0:19:41.32:0,41,481	0/0:20,0:20:53.70:0,54,660	0/0:18,1:19:38.96:0,39,433	0/1:34,1:34:34.28:34,0,719	./.	1/1:22,6:23:21.25:171,21,0	1/1:38,8:39:79.11:810,79,0	1/1:7,9:13:8.54:99,9,0	0/1:18,0:18:33.92:34,0,286	0/0:19,1:20:39.64:0,40,672	0/0:12,1:12:32.61:0,33,370	0/0:19,0:19:30.89:0,31,335	1/1:9,14:15:26.82:282,27,0	0/0:20,0:19:41.54:0,42,442	0/1:12,4:15:92.41:92,0,291	0/1:18,2:20:25.47:25,0,498	0/0:17,1:18:15.82:0,16,322	0/1:58,4:60:43.99:44,0,866	0/0:14,0:14:23.66:0,24,282	0/0:12,0:12:26.68:0,27,339	0/0:35,0:33:86:0,86,1069	0/0:18,1:19:32.76:0,33,358	0/1:25,1:24:49.59:50,0,479	0/1:11,0:11:24.36:24,0,231	0/1:11,2:13:2.46:2,0,340
chr10	65825794	.	T	TC	620.89	PASS	AB=0.765;AC=7;AF=0.130;AN=54;BaseQRankSum=7.384;DP=795;FS=8.443;HRun=2;HaplotypeScore=112.2945;InbreedingCoeff=0.4865;MQ=53.26;MQ0=13;MQRankSum=-6.845;QD=10.35;ReadPosRankSum=-2.218;VQSLOD=0.4460;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:77.69:0,78,1225	0/0:15,0:15:36.12:0,36,466	0/0:36,1:7:11.40:0,11,100	0/0:38,0:3:5.51:0,6,55	0/1:22,2:23:1.31:1,0,640	0/0:34,0:34:81.45:0,81,1264	0/0:40,0:38:99:0,105,1339	./.	0/1:6,5:11:17.88:223,0,18	0/1:7,6:12:89.74:220,0,90	1/1:1,3:3:9.03:130,9,0	0/0:33,1:33:99:0,99,1284	0/0:27,0:26:59.53:0,60,866	0/0:37,0:36:99:0,105,1361	0/0:49,1:49:86.07:0,86,1610	1/1:4,4:8:12.04:173,12,0	0/0:43,1:44:99:0,126,1603	0/0:40,0:40:95.04:0,95,1476	0/0:25,0:18:54.17:0,54,691	0/0:29,0:27:29.75:0,30,853	0/0:53,2:54:62.96:0,63,1781	0/0:30,1:30:36.41:0,36,965	0/0:14,0:13:39.13:0,39,506	0/0:28,1:29:49.61:0,50,839	0/0:32,0:31:84.27:0,84,1090	0/0:45,0:41:99:0,120,1555	0/0:27,0:26:75.24:0,75,973	0/0:15,0:14:42.14:0,42,538
chr10	65825804	.	CCTTTCT	C	46.51	PASS	AB=0.905;AC=6;AF=0.111;AN=54;BaseQRankSum=6.187;DP=770;FS=22.620;HRun=0;HaplotypeScore=179.9582;InbreedingCoeff=0.1680;MQ=54.42;MQ0=8;MQRankSum=-3.954;QD=0.61;ReadPosRankSum=-2.960;VQSLOD=0.7947;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,102,3389	0/0:12,0:12:27.09:0,27,886	0/1:36,0:8:13.21:13,0,304	0/0:44,0:6:12.18:0,12,235	0/1:21,3:23:35.44:35,0,2098	0/0:35,0:34:99:0,102,3620	0/0:43,0:40:99:0,108,3722	./.	0/0:7,0:7:11.69:0,12,132	0/1:5,1:5:27.12:27,0,322	1/1:0,1:2:5.99:62,6,0	0/0:34,0:33:99:0,99,3586	0/0:24,0:24:64.46:0,64,2101	0/0:37,0:36:99:0,108,3971	0/0:51,0:50:99:0,132,4981	0/1:6,0:6:29.24:29,0,117	0/0:41,0:41:99:0,120,4251	0/0:41,0:41:99:0,114,4169	0/0:18,0:16:48.13:0,48,1579	0/0:29,0:27:47.10:0,47,2615	0/0:51,0:50:99:0,144,4947	0/0:30,1:30:5.38:0,5,2571	0/0:12,0:11:33.09:0,33,1133	0/0:27,0:27:57.74:0,58,2429	0/0:33,0:32:93.32:0,93,3316	0/0:45,0:43:99:0,129,4409	0/0:30,0:29:87.30:0,87,3093	0/0:13,0:13:39.13:0,39,1465
chr10	65825847	.	T	TC	579.95	PASS	AB=0.942;AC=9;AF=0.173;AN=52;BaseQRankSum=10.134;DP=796;FS=15.665;HRun=2;HaplotypeScore=128.8464;InbreedingCoeff=0.6756;MQ=48.98;MQ0=32;MQRankSum=-8.698;QD=6.52;ReadPosRankSum=-2.055;VQSLOD=-0.7344;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,2:49:18.20:0,18,1463	0/0:14,0:11:24.08:0,24,311	./.	0/0:41,0:5:3.10:0,3,69	0/0:24,1:22:62.23:0,62,781	0/0:31,0:29:69.22:0,69,893	0/0:37,0:32:85.53:0,86,1120	./.	1/1:7,9:14:13.91:303,14,0	1/1:4,4:8:6.58:131,7,0	1/1:2,3:5:9:100,9,0	0/0:38,1:38:66.33:0,66,1249	0/0:26,0:26:72.23:0,72,931	0/0:34,0:33:60.23:0,60,1029	0/0:43,0:41:99:0,99,1266	1/1:4,6:7:4.89:104,5,0	0/0:42,2:43:33.68:0,34,1352	0/1:46,3:48:83.38:83,0,1388	0/0:22,0:15:23.35:0,23,474	0/0:19,0:19:8.85:0,9,544	0/0:52,2:53:99:0,105,1754	0/0:26,1:26:1.05:0,1,675	0/0:18,0:17:39.11:0,39,491	0/0:40,0:40:95.12:0,95,1296	0/0:25,0:24:72.23:0,72,930	0/0:36,3:33:84.27:0,84,1090	0/0:25,1:24:72.23:0,72,932	0/0:17,1:15:42.14:0,42,545
chr10	65826239	.	TC	T	447.51	PASS	AB=0.958;AC=5;AF=0.093;AN=54;BaseQRankSum=7.620;DP=687;FS=8.625;HRun=2;HaplotypeScore=90.2241;InbreedingCoeff=0.3257;MQ=49.95;MQ0=22;MQRankSum=-7.312;QD=11.19;ReadPosRankSum=-0.768;VQSLOD=0.9980;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,135,1954	0/0:16,0:16:48.16:0,48,719	0/0:40,0:5:11.63:0,12,143	0/0:50,0:12:20.89:0,21,325	0/0:16,0:16:48.16:0,48,719	0/0:17,0:16:45.14:0,45,650	0/0:40,0:38:99:0,105,1516	./.	0/1:5,0:5:27.70:49,0,28	0/1:12,0:10:99:167,0,107	0/1:6,1:5:29.83:123,0,30	0/0:31,0:31:87.28:0,87,1274	0/0:21,0:21:54.17:0,54,788	0/0:20,0:20:60.20:0,60,889	0/0:30,0:30:81.26:0,81,1194	1/1:11,5:12:17.59:229,18,0	0/0:45,1:45:58.25:0,58,1722	0/0:37,2:36:24.31:0,24,1279	0/0:20,0:16:23.22:0,23,602	0/0:18,0:18:54.18:0,54,805	0/0:26,0:24:66.20:0,66,949	0/0:13,0:12:30.10:0,30,450	0/0:17,0:17:51.16:0,51,744	0/0:45,1:46:99:0,112,1744	0/0:25,0:25:75.25:0,75,1120	0/0:29,0:28:84.28:0,84,1239	0/0:23,0:23:66.22:0,66,989	0/0:11,0:11:33.11:0,33,488
chr10	65826246	.	CCTCT	C	776.73	PASS	AB=0.613;AC=5;AF=0.093;AN=54;BaseQRankSum=7.793;DP=684;FS=22.809;HRun=0;HaplotypeScore=123.5415;InbreedingCoeff=0.3158;MQ=51.43;MQ0=19;MQRankSum=-6.835;QD=19.42;ReadPosRankSum=-0.968;VQSLOD=1.6328;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,112,3371	0/0:16,0:16:48.16:0,48,1346	0/0:41,0:7:15.04:0,15,321	0/0:49,0:14:21.20:0,21,545	0/0:19,0:19:57.19:0,57,1477	0/0:17,0:17:51.16:0,51,1309	0/0:37,0:35:98.15:0,98,2562	./.	0/1:1,3:4:28.03:106,0,28	0/1:5,7:10:14.42:264,0,14	0/1:3,4:5:40.62:192,0,41	0/0:32,0:32:90.14:0,90,2468	0/0:21,0:21:60.20:0,60,1541	0/0:18,0:18:51.17:0,51,1424	0/0:26,0:26:72.23:0,72,2003	1/1:6,11:13:9.92:332,10,0	0/0:46,0:45:99:0,135,3468	0/0:39,0:36:99:0,102,2481	0/0:23,0:19:46.22:0,46,1350	0/0:19,0:19:57.20:0,57,1633	0/0:26,0:24:69.24:0,69,1808	0/0:14,0:14:36.12:0,36,938	0/0:17,0:17:51.17:0,51,1405	0/0:44,0:44:99:0,116,3018	0/0:28,0:28:84.25:0,84,2197	0/0:28,0:27:81.28:0,81,2213	0/0:27,0:27:78.27:0,78,2066	0/0:11,0:11:33.11:0,33,904
chr10	65826252	.	C	CT	664.22	PASS	AB=0.963;AC=5;AF=0.093;AN=54;BaseQRankSum=9.394;DP=693;FS=6.844;HRun=2;HaplotypeScore=91.8338;InbreedingCoeff=0.5873;MQ=54.64;MQ0=18;MQRankSum=-7.840;QD=15.81;ReadPosRankSum=0.008;VQSLOD=3.1810;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,103,1650	0/0:15,0:15:45.15:0,45,629	0/0:41,0:10:4.92:0,5,235	0/0:51,1:17:35.98:0,36,396	0/0:23,0:23:66.14:0,66,863	0/0:20,0:20:54.18:0,54,748	0/0:37,0:36:92.79:0,93,1326	./.	0/1:4,0:4:0.14:48,0,0	0/1:11,0:9:0.38:229,0,0	0/1:7,1:6:23.56:115,0,24	0/0:34,0:34:94.81:0,95,1260	0/0:18,0:18:54.16:0,54,733	0/0:16,0:16:48.16:0,48,671	0/0:25,0:25:72.20:0,72,985	1/1:12,7:15:30:395,30,0	0/0:46,0:46:78.53:0,79,1650	0/0:36,0:34:60.61:0,61,1104	0/0:24,0:20:49.40:0,49,746	0/0:24,0:24:69.23:0,69,960	0/0:23,0:22:60.06:0,60,807	0/0:17,0:17:45.14:0,45,611	0/0:17,0:17:51.17:0,51,711	0/0:45,0:45:93.26:0,93,1534	0/0:27,0:27:81.27:0,81,1120	0/0:28,0:27:81.27:0,81,1126	0/0:27,0:27:80.99:0,81,1076	0/0:11,0:11:33.07:0,33,424
chr10	65826253	.	CT	C	369.55	PASS	AB=0.619;AC=6;AF=0.111;AN=54;BaseQRankSum=8.779;DP=695;FS=12.688;HRun=1;HaplotypeScore=90.4562;InbreedingCoeff=0.6726;MQ=54.81;MQ0=16;MQRankSum=-6.909;QD=8.80;ReadPosRankSum=0.700;VQSLOD=-0.1527;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,105,1894	0/0:17,0:17:45.15:0,45,718	0/0:40,0:9:23.97:0,24,303	0/0:50,1:16:17.26:0,17,462	0/0:23,0:23:69.02:0,69,1043	0/0:20,0:20:60.16:0,60,887	0/0:37,0:36:96.18:0,96,1531	./.	0/1:1,3:4:2.22:59,0,2	1/1:4,7:9:7.29:153,7,0	0/1:4,4:6:31.13:90,0,31	0/0:34,0:34:99:0,99,1512	0/0:19,0:19:57.16:0,57,849	0/0:16,0:16:48.16:0,48,767	0/0:25,0:25:72.23:0,72,1129	1/1:8,11:15:29.77:196,30,0	0/0:47,0:46:99:0,124,1945	0/0:36,0:34:88.12:0,88,1289	0/0:26,0:22:58.59:0,59,883	0/0:24,0:24:72.20:0,72,1118	0/0:24,0:23:62.84:0,63,930	0/0:17,0:17:45.15:0,45,705	0/0:17,0:17:51.17:0,51,803	0/0:45,0:45:99:0,120,1825	0/0:27,0:27:81.28:0,81,1293	0/0:27,0:27:81.27:0,81,1273	0/0:27,0:27:81.01:0,81,1204	0/0:9,0:9:27.09:0,27,431
chr10	65826254	.	T	TC	400.50	PASS	AB=0.966;AC=10;AF=0.185;AN=54;BaseQRankSum=10.889;DP=692;FS=0.580;HRun=2;HaplotypeScore=89.6889;InbreedingCoeff=0.7218;MQ=54.90;MQ0=15;MQRankSum=-9.396;QD=3.18;ReadPosRankSum=-0.741;VQSLOD=-0.2367;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,1:42:99:0,114,1549	0/0:17,0:17:45.15:0,45,584	0/0:37,1:9:11.97:0,12,227	0/0:52,0:16:30.20:0,30,409	0/0:23,0:23:66.21:0,66,852	0/0:19,0:19:57.19:0,57,739	0/0:37,0:36:56.44:0,56,1203	./.	1/1:3,1:4:8.55:69,9,0	1/1:11,1:10:19.97:124,20,0	1/1:8,0:6:13.61:72,14,0	0/0:34,0:34:99:0,99,1244	0/0:19,0:19:57.15:0,57,700	0/0:16,0:16:48.16:0,48,623	0/0:25,0:25:72.22:0,72,920	1/1:20,0:16:28.79:230,29,0	0/1:45,2:46:44.68:45,0,1454	0/1:33,1:34:22.69:23,0,905	0/0:26,0:22:53.07:0,53,710	0/0:25,0:25:72.23:0,72,930	0/0:23,1:23:18.30:0,18,699	0/0:17,0:17:45.13:0,45,570	0/0:17,0:17:48.16:0,48,623	0/0:41,2:44:47.38:0,47,1355	0/0:27,0:27:81.26:0,81,1051	0/0:27,0:27:78.25:0,78,1001	0/0:25,1:26:30.40:0,30,889	0/0:9,0:9:27.09:0,27,350
chr10	65826763	.	ATT	A	3128.50	PASS	AB=0.926;AC=9;AF=0.167;AN=54;BaseQRankSum=11.582;DP=603;FS=4.104;HRun=3;HaplotypeScore=85.9116;InbreedingCoeff=0.8664;MQ=75.14;MQ0=0;MQRankSum=-0.849;QD=30.08;ReadPosRankSum=0.371;VQSLOD=3.0890;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,138,2532	0/0:6,0:6:18.05:0,18,317	0/0:19,0:19:46.81:0,47,936	0/0:19,0:16:42.14:0,42,741	0/0:36,0:36:99:0,108,2029	0/0:27,0:27:81.27:0,81,1504	0/0:13,0:13:39.13:0,39,739	./.	1/1:1,18:19:57.19:862,57,0	1/1:0,27:27:80.91:1148,81,0	1/1:0,18:18:44.98:668,45,0	0/0:23,0:23:69.21:0,69,1290	0/0:16,0:16:48.15:0,48,865	0/0:18,0:18:54.18:0,54,1003	0/0:24,0:24:72.21:0,72,1258	1/1:0,15:15:39.13:597,39,0	0/0:27,0:27:75.26:0,75,1427	0/0:22,0:22:63.18:0,63,1179	0/0:31,0:31:93.30:0,93,1706	0/0:22,0:22:60.21:0,60,1143	0/0:33,0:33:93.32:0,93,1797	0/0:13,0:13:39.13:0,39,754	0/0:22,0:22:66.23:0,66,1258	0/0:21,0:21:60.19:0,60,1127	0/0:30,0:30:90.31:0,90,1718	0/1:23,2:25:16.64:17,0,1217	0/0:23,0:23:69.24:0,69,1303	0/0:7,0:7:21.07:0,21,393
chr10	65827891	.	GC	G	11288.57	PASS	AC=40;AF=0.741;AN=54;BaseQRankSum=12.889;DP=485;FS=74.519;HRun=1;HaplotypeScore=92.1076;InbreedingCoeff=0.9660;MQ=84.94;MQ0=0;MQRankSum=-5.451;QD=36.53;ReadPosRankSum=4.326;VQSLOD=-0.6835;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,144,2214	1/1:0,2:2:3.01:42,3,0	0/0:22,1:23:33.07:0,33,656	0/0:28,0:27:64.76:0,65,994	0/0:18,0:18:54.15:0,54,816	1/1:0,12:12:30.10:418,30,0	1/1:0,19:19:45.15:629,45,0	./.	1/1:0,13:13:33.11:461,33,0	1/1:0,10:10:27.04:321,27,0	1/1:0,11:11:33.11:461,33,0	1/1:0,19:19:51.17:711,51,0	0/0:13,0:13:39.09:0,39,574	1/1:0,19:19:51.17:711,51,0	1/1:0,18:18:48.16:669,48,0	1/1:0,14:14:36.12:502,36,0	1/1:0,20:20:57.19:796,57,0	1/1:0,21:21:54.18:755,54,0	1/1:0,24:24:72.19:964,72,0	1/1:0,16:16:45.11:584,45,0	1/1:0,25:25:66.22:915,66,0	1/1:0,9:9:24.08:335,24,0	0/0:26,0:26:78.25:0,78,1219	0/0:19,0:19:54.18:0,54,861	1/1:0,11:11:33.11:461,33,0	1/1:0,19:19:54.13:716,54,0	1/1:0,20:20:42.14:587,42,0	1/1:0,7:7:18.06:251,18,0
chr10	65828535	.	T	TAAACAAAC	969.70	PASS	AB=1.000;AC=6;AF=0.107;AN=56;BaseQRankSum=0.980;DP=416;FS=4.721;HRun=0;HaplotypeScore=232.3165;InbreedingCoeff=0.5058;MQ=42.07;MQ0=3;MQRankSum=-3.967;QD=16.44;ReadPosRankSum=0.318;VQSLOD=2.4561;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:48.14:0,48,1109	0/0:8,0:8:7.83:0,8,95	0/0:10,0:5:8.98:0,9,92	0/0:4,0:3:3.01:0,3,39	0/0:9,0:9:23.28:0,23,326	0/0:17,0:17:33.33:0,33,595	0/0:19,0:19:30.87:0,31,418	0/0:1,0:1:3.01:0,3,71	1/1:6,6:11:33.11:943,33,0	1/1:19,0:18:21.14:69,21,0	0/1:13,0:13:47.28:47,0,62	0/0:17,0:17:27.86:0,28,454	0/0:2,0:2:3.01:0,3,85	0/0:21,0:21:35.44:0,35,665	0/0:25,0:25:48.04:0,48,930	0/1:15,0:15:3.96:44,0,4	0/0:27,0:27:42.76:0,43,698	0/0:18,0:17:30.06:0,30,424	0/0:20,0:18:18.36:0,18,377	0/0:28,0:28:46.47:0,46,834	0/0:13,0:13:4.25:0,4,38	0/0:15,0:15:17.32:0,17,245	0/0:9,0:9:21.04:0,21,334	0/0:6,0:6:14.98:0,15,249	0/0:25,0:25:52.06:0,52,981	0/0:25,0:25:50.94:0,51,1002	0/0:16,0:16:40.47:0,40,886	0/0:6,0:6:15.01:0,15,267
chr10	65828539	.	T	TAAAC	3578.32	PASS	AB=0.987;AC=24;AF=0.429;AN=56;BaseQRankSum=-6.521;DP=403;FS=11.388;HRun=0;HaplotypeScore=195.9136;InbreedingCoeff=-0.2264;MQ=40.74;MQ0=3;MQRankSum=0.361;QD=10.11;ReadPosRankSum=-2.160;VQSLOD=2.0595;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:48.05:0,48,709	0/1:7,0:7:40.14:40,0,64	0/0:8,0:3:2.99:0,3,23	0/0:3,0:2:2.94:0,3,18	0/1:8,0:8:26.39:26,0,127	0/1:18,0:18:55.46:55,0,215	0/1:19,0:19:79.20:79,0,166	0/0:1,0:1:3.01:0,3,53	1/1:15,0:14:35.76:430,36,0	1/1:13,7:19:47.82:706,48,0	0/1:8,3:11:5.23:334,0,5	0/1:17,0:17:99:129,0,149	0/0:2,0:2:6.01:0,6,84	0/1:22,0:22:99:124,0,244	0/1:23,0:23:97.91:98,0,319	1/1:8,8:16:41.80:702,42,0	0/1:26,0:26:99:104,0,240	0/1:16,0:15:64.89:65,0,158	0/1:18,0:16:99:120,0,112	0/1:28,0:28:99:125,0,341	1/1:9,0:9:17.79:124,18,0	0/1:12,0:12:66.35:91,0,66	0/0:7,0:7:14.99:0,15,156	0/0:5,0:5:14.90:0,15,146	0/1:27,0:27:81.10:81,0,378	0/1:25,0:25:99:131,0,290	0/1:17,0:17:15.09:15,0,294	0/0:6,0:6:17.88:0,18,150
chr10	65828574	.	T	TTA	12769.99	PASS	AB=0.586;AC=39;AF=0.722;AN=54;BaseQRankSum=8.835;DP=380;FS=6.956;HRun=0;HaplotypeScore=169.5416;InbreedingCoeff=0.7947;MQ=42.52;MQ0=2;MQRankSum=-10.489;QD=38.81;ReadPosRankSum=1.943;VQSLOD=5.9795;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:60.11:0,60,817	1/1:1,6:7:20.90:360,21,0	0/0:5,0:4:1.96:0,2,46	./.	0/0:8,0:8:21.02:0,21,264	1/1:4,13:18:50.96:823,51,0	1/1:8,10:18:50.77:704,51,0	0/0:1,0:1:2.98:0,3,21	0/1:5,1:16:14.82:256,0,15	1/1:11,0:23:40.85:418,41,0	1/1:2,0:14:41.95:378,42,0	1/1:6,8:14:38.75:553,39,0	0/0:4,0:4:12.01:0,12,158	1/1:8,10:18:53.78:731,54,0	1/1:1,17:18:54.13:977,54,0	1/1:2,0:15:45.02:416,45,0	1/1:6,13:19:34.14:789,34,0	1/1:4,6:9:18.03:291,18,0	1/1:7,12:16:39:635,39,0	1/1:1,22:23:64.10:1214,64,0	1/1:1,2:3:6.02:116,6,0	1/1:6,6:12:26.86:362,27,0	0/0:5,0:5:15.03:0,15,204	0/0:4,0:4:9.01:0,9,114	1/1:6,25:31:87.05:1487,87,0	1/1:8,15:25:68.97:1070,69,0	1/1:6,14:20:59.90:938,60,0	1/1:1,4:5:15.01:252,15,0
chr10	65828581	.	AAG	A	1324.32	PASS	AB=0.990;AC=21;AF=0.389;AN=54;BaseQRankSum=12.043;DP=391;FS=2.970;HRun=0;HaplotypeScore=214.5308;InbreedingCoeff=-0.4105;MQ=44.88;MQ0=2;MQRankSum=-4.418;QD=4.22;ReadPosRankSum=8.623;VQSLOD=1.9266;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:54.18:0,54,913	0/1:7,0:7:20.38:35,0,20	0/0:5,0:4:9.28:0,9,103	0/0:5,0:3:5.98:0,6,46	0/0:11,0:11:33.07:0,33,476	0/1:19,0:19:75.07:94,0,75	0/1:20,0:20:19.27:19,0,293	./.	0/1:17,0:16:39.58:112,0,40	0/1:20,3:23:99:163,0,239	0/1:14,1:15:59.33:187,0,59	0/1:13,0:13:49.07:49,0,64	0/0:4,0:4:12.04:0,12,207	0/1:18,0:18:34.87:35,0,134	0/1:18,0:18:83.08:83,0,91	0/1:17,0:17:89.88:90,0,173	0/1:21,0:21:15.87:16,0,222	0/1:10,0:9:14.31:14,0,75	0/0:20,0:18:26.86:0,27,305	0/1:23,0:23:59.02:149,0,59	1/1:3,0:3:4.07:12,4,0	0/1:12,0:12:35.42:35,0,145	0/0:9,0:9:27.04:0,27,358	0/0:4,0:4:11.87:0,12,169	0/1:30,0:30:75.18:200,0,75	0/1:26,0:26:87.65:88,0,308	0/1:17,0:17:72.91:93,0,73	1/1:5,0:5:2.66:7,3,0
chr10	65828593	.	GTTTGAA	G	16110.80	PASS	AC=40;AF=0.741;AN=54;BaseQRankSum=11.568;DP=417;FS=5.026;HRun=0;HaplotypeScore=175.9796;InbreedingCoeff=0.9666;MQ=63.76;MQ0=0;MQRankSum=-12.023;QD=47.38;ReadPosRankSum=4.713;VQSLOD=4.4255;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:48.16:0,48,1609	1/1:0,8:8:24.08:534,24,0	0/0:13,0:13:30.10:0,30,1003	0/0:7,0:5:15.05:0,15,449	0/0:13,0:13:39.13:0,39,1287	1/1:1,15:16:39.13:887,39,0	1/1:3,16:19:39.13:887,39,0	./.	1/1:2,17:18:32.65:750,33,0	1/1:3,23:27:66.11:1340,66,0	1/1:2,15:17:30.03:682,30,0	1/1:0,9:9:27.09:615,27,0	0/0:5,0:5:15.05:0,15,523	1/1:4,12:16:36.12:805,36,0	1/1:3,19:22:45.15:1023,45,0	1/1:4,12:16:30.10:682,30,0	1/1:3,17:20:39.13:888,39,0	1/1:1,9:9:12.04:274,12,0	1/1:6,14:19:39.09:691,39,0	1/1:2,23:25:57.20:1270,57,0	1/1:0,7:7:6.02:137,6,0	1/1:4,11:15:24.08:546,24,0	0/0:14,0:14:42.14:0,42,1429	0/0:7,0:7:21.07:0,21,671	1/1:5,21:26:66.23:1492,66,0	1/1:4,19:24:60.21:1342,60,0	1/1:2,14:16:36.12:819,36,0	1/1:0,8:8:21.07:447,21,0
chr10	65828848	.	T	TGTGA	28110.27	PASS	AC=40;AF=0.741;AN=54;BaseQRankSum=-14.584;DP=636;FS=1.175;HRun=0;HaplotypeScore=101.9632;InbreedingCoeff=0.9989;MQ=90.53;MQ0=1;MQRankSum=-6.779;QD=60.19;ReadPosRankSum=4.261;VQSLOD=6.6368;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,111,1976	1/1:1,9:11:27.09:705,27,0	0/0:32,0:32:72.15:0,72,1139	0/0:24,0:24:48.09:0,48,833	0/0:16,0:16:45.14:0,45,783	1/1:1,19:22:51.18:1334,51,0	1/1:4,20:26:63.22:1634,63,0	./.	1/1:1,24:25:63.22:1644,63,0	1/1:1,21:22:63.22:1644,63,0	1/1:5,10:15:24.08:627,24,0	1/1:8,19:29:54.19:1404,54,0	0/0:19,0:19:42.14:0,42,764	1/1:3,23:26:60.21:1570,60,0	1/1:8,22:30:66.23:1728,66,0	1/1:1,24:26:69.24:1807,69,0	1/1:5,28:36:65.96:1719,66,0	1/1:2,11:13:33.11:849,33,0	1/1:10,17:27:63.21:1580,63,0	1/1:3,13:16:33.11:864,33,0	1/1:5,43:51:99:3064,117,0	1/1:2,17:19:45.15:1177,45,0	0/0:8,0:8:24.05:0,24,376	0/0:29,0:29:84.29:0,84,1527	1/1:3,14:17:36.12:942,36,0	1/1:4,12:16:48.16:1230,48,0	1/1:2,18:21:45.15:1178,45,0	1/1:1,17:18:54.19:1408,54,0
chr10	65829661	.	A	AGTGT	1880.23	PASS	AB=1.000;AC=31;AF=0.738;AN=42;BaseQRankSum=2.907;DP=605;FS=1.183;HRun=0;HaplotypeScore=139.1181;InbreedingCoeff=0.4969;MQ=62.37;MQ0=14;MQRankSum=-1.752;QD=5.19;ReadPosRankSum=1.168;VQSLOD=2.4700;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:47:8.06:0,8,178	1/1:10,0:10:2.98:61,3,0	./.	./.	0/0:19,0:18:4.81:0,5,30	./.	0/0:35,0:34:2.87:0,3,15	./.	1/1:30,0:30:15.05:240,15,0	1/1:27,0:27:18.44:223,18,0	./.	1/1:24,0:24:11.22:188,11,0	0/0:11,0:11:2.94:0,3,46	1/1:20,0:19:6.02:113,6,0	1/1:21,0:20:6.02:100,6,0	1/1:11,9:20:3.48:71,3,0	./.	1/1:16,0:16:6.02:105,6,0	1/1:25,0:23:15:233,15,0	1/1:17,0:17:2.85:49,3,0	1/1:26,0:25:5.99:49,6,0	1/1:18,0:18:8.86:161,9,0	0/0:18,0:19:17.84:0,18,258	0/1:37,0:37:6.97:7,0,145	1/1:22,0:21:8.99:156,9,0	1/1:33,0:33:15.85:214,16,0	1/1:16,0:16:2.74:50,3,0	./.
chr10	65829696	.	G	GTGTGTGTA	3076.19	PASS	AB=0.712;AC=23;AF=0.442;AN=52;BaseQRankSum=1.899;DP=619;FS=4.429;HRun=0;HaplotypeScore=136.7469;InbreedingCoeff=0.4147;MQ=51.02;MQ0=15;MQRankSum=-0.394;QD=9.49;ReadPosRankSum=1.179;VQSLOD=2.4695;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:56:99:0,102,1039	1/1:9,0:9:14.50:154,15,0	0/0:17,0:9:11.83:0,12,146	0/0:31,0:14:41.21:0,41,377	0/0:21,0:19:17.99:0,18,176	./.	0/0:10,1:31:6:0,6,67	./.	1/1:4,0:29:15.05:357,15,0	0/0:25,0:25:16.05:0,16,282	0/0:4,0:4:8.99:0,9,74	1/1:21,0:22:13.04:405,13,0	0/0:6,0:6:9:0,9,130	1/1:20,0:19:14.98:204,15,0	0/1:10,1:28:25.10:206,0,25	0/0:21,0:21:16.60:0,17,201	0/1:9,1:34:2.31:22,0,2	0/1:4,0:20:32.77:91,0,33	1/1:18,0:18:21.88:396,22,0	1/1:6,2:22:2.80:109,3,0	1/1:31,0:30:42.25:351,42,0	0/1:17,0:17:18.96:285,0,19	0/0:19,0:19:44.04:0,44,667	0/0:42,0:42:72.79:0,73,772	0/1:11,12:23:32.86:177,0,33	0/1:29,0:29:6.87:314,0,7	0/1:5,0:15:45.98:97,0,46	1/1:4,0:4:11.97:96,12,0
chr10	65830812	.	AC	A	10469.88	PASS	AB=0.636;AC=51;AF=0.911;AN=56;BaseQRankSum=-1.232;DP=564;FS=3.310;HRun=10;HaplotypeScore=132.8274;InbreedingCoeff=0.6590;MQ=72.49;MQ0=0;MQRankSum=-2.731;QD=19.28;ReadPosRankSum=3.383;VQSLOD=3.8916;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:15,10:26:35.02:292,35,0	1/1:3,10:13:26.78:221,27,0	0/0:11,0:10:3.72:0,4,42	0/0:10,0:9:11.83:0,12,84	1/1:4,12:19:45.09:355,45,0	1/1:3,15:18:41.99:364,42,0	1/1:6,26:32:71.95:624,72,0	1/1:6,12:18:35.96:312,36,0	1/1:4,18:22:53.83:468,54,0	1/1:3,13:16:38.99:338,39,0	1/1:2,11:13:29.97:260,30,0	1/1:1,21:22:56.96:494,57,0	0/1:6,8:14:12.19:134,0,12	1/1:6,21:27:65.94:572,66,0	1/1:2,12:14:32.98:286,33,0	1/1:1,19:20:53.99:469,54,0	1/1:1,26:27:68.99:599,69,0	1/1:5,27:32:77.97:677,78,0	1/1:7,20:27:59.94:512,60,0	1/1:1,7:8:14.94:129,15,0	1/1:3,64:67:99:1456,168,0	1/1:1,9:10:23.97:208,24,0	1/1:2,4:5:9:78,9,0	1/1:13,30:45:79.03:662,79,0	1/1:3,12:15:35.96:310,36,0	1/1:4,10:14:26.95:234,27,0	1/1:0,13:13:32.99:286,33,0	1/1:0,5:5:15:130,15,0
chr10	65833582	.	C	CG	2225.50	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-10.369;DP=653;FS=1.142;HRun=0;HaplotypeScore=66.0093;InbreedingCoeff=0.9933;MQ=84.40;MQ0=0;MQRankSum=-1.648;QD=41.99;ReadPosRankSum=1.357;VQSLOD=4.3296;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,105,1469	0/0:7,0:7:18.06:0,18,252	0/0:16,0:16:24.65:0,25,486	0/0:23,0:23:52.39:0,52,688	0/0:22,0:22:66.21:0,66,905	0/0:21,0:21:60.20:0,60,839	0/0:30,0:30:90.30:0,90,1256	0/0:18,0:18:51.16:0,51,698	1/1:0,18:18:54.18:861,54,0	0/0:19,0:19:57.19:0,57,784	0/0:9,0:9:27.09:0,27,377	0/0:26,0:26:78.25:0,78,1073	0/0:27,0:27:78.26:0,78,1090	0/0:22,0:22:66.22:0,66,922	0/0:24,0:24:72.24:0,72,1007	0/0:25,0:25:72.24:0,72,1007	0/0:39,0:39:99:0,114,1593	1/1:1,34:35:93.32:1486,93,0	0/0:26,0:26:75.25:0,75,1046	0/0:14,0:14:39.13:0,39,545	0/0:48,0:48:99:0,141,1951	0/0:19,0:19:54.18:0,54,755	0/0:13,0:13:35.86:0,36,486	0/0:38,0:38:99:0,111,1551	0/0:19,0:19:54.18:0,54,754	0/0:23,0:23:69.23:0,69,965	0/0:29,0:29:87.28:0,87,1199	0/0:8,0:8:24.08:0,24,334
chr10	65833859	.	TC	T	13861.49	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=8.226;DP=732;FS=8.014;HRun=7;HaplotypeScore=81.7319;InbreedingCoeff=0.9995;MQ=82.27;MQ0=0;MQRankSum=-5.859;QD=26.45;ReadPosRankSum=0.014;VQSLOD=5.1753;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,135,1654	1/1:1,8:9:24.05:244,24,0	0/0:23,0:23:51.15:0,51,618	0/0:22,0:21:41.49:0,41,492	0/0:22,0:22:60.17:0,60,731	1/1:1,20:21:57.13:581,57,0	1/1:3,25:28:72.16:735,72,0	1/1:2,20:22:60.03:581,60,0	1/1:0,28:28:81.18:826,81,0	1/1:5,26:30:69.14:704,69,0	1/1:2,11:13:33.07:337,33,0	1/1:5,18:23:63.11:630,63,0	0/0:27,0:27:78.24:0,78,968	1/1:4,23:27:69.15:704,69,0	1/1:3,26:29:72.16:734,72,0	1/1:2,21:23:60.14:612,60,0	1/1:4,34:38:93.20:949,93,0	1/1:3,35:38:99:1071,105,0	1/1:5,17:22:54.08:539,54,0	1/1:1,12:13:36.08:367,36,0	1/1:3,59:62:99:1622,159,0	1/1:1,19:20:57.05:567,57,0	0/0:24,0:24:63.18:0,63,765	0/0:38,0:38:99:0,105,1297	1/1:2,18:20:51.11:520,51,0	1/1:3,23:26:69.11:693,69,0	1/1:2,13:15:36.04:356,36,0	1/1:0,16:16:48.11:490,48,0
chr10	65833958	.	T	TC	13662.86	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-9.587;DP=799;FS=0.270;HRun=4;HaplotypeScore=107.1375;InbreedingCoeff=0.9994;MQ=81.91;MQ0=0;MQRankSum=-4.677;QD=34.94;ReadPosRankSum=1.905;VQSLOD=4.3081;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:59,0:59:99:0,165,1862	1/1:0,10:10:27.09:368,27,0	0/0:30,0:30:87.07:0,87,931	0/0:19,0:19:39.04:0,39,407	0/0:25,0:25:63.18:0,63,714	1/1:4,21:25:60.16:798,60,0	1/1:1,33:34:90.26:1209,90,0	0/0:22,0:22:60.15:0,60,669	0/0:30,0:30:87.23:0,87,976	0/0:35,0:35:90.25:0,90,1020	0/0:17,0:17:48.13:0,48,538	1/1:1,28:29:78.26:1065,78,0	0/0:44,0:44:99:0,126,1413	1/1:2,27:29:78.26:1065,78,0	1/1:2,33:35:93.31:1271,93,0	0/0:31,0:31:84.24:0,84,948	1/1:2,20:22:60.20:820,60,0	0/0:28,0:28:78.22:0,78,885	1/1:7,24:31:75.23:996,75,0	1/1:0,11:11:27.09:369,27,0	1/1:7,41:48:99:1542,115,0	1/1:2,22:24:63.21:861,63,0	0/0:20,0:20:57.16:0,57,645	0/0:48,0:48:99:0,135,1499	1/1:0,24:24:66.18:882,66,0	1/1:3,30:33:59.65:1196,60,0	1/1:6,21:27:43.32:893,43,0	1/1:1,8:9:24.08:328,24,0
chr10	65834032	.	GGGAGC	G	10972.94	PASS	AB=1.000;AC=39;AF=0.696;AN=56;BaseQRankSum=19.053;DP=617;FS=0.000;HRun=0;HaplotypeScore=270.4215;InbreedingCoeff=0.8981;MQ=70.68;MQ0=0;MQRankSum=-18.571;QD=27.50;ReadPosRankSum=2.261;VQSLOD=4.0003;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,154,4767	1/1:10,0:10:13.12:282,13,0	0/0:18,0:18:52.37:0,52,1372	0/0:17,0:17:48.14:0,48,1294	0/0:12,0:12:36.10:0,36,1106	1/1:19,0:19:37.47:482,37,0	1/1:25,0:25:75.02:916,75,0	1/1:11,3:14:42.10:494,42,0	0/0:34,0:34:99:0,102,3333	1/1:18,1:19:56.76:607,57,0	1/1:11,0:11:14.99:182,15,0	1/1:28,0:28:67.53:754,68,0	0/0:35,0:35:99:0,105,3241	1/1:22,0:22:62.10:522,62,0	1/1:23,0:23:65.89:627,66,0	1/1:25,0:25:49.57:627,50,0	1/1:13,0:13:29.97:303,30,0	0/1:17,0:17:92.51:93,0,123	1/1:17,0:16:48.12:549,48,0	1/1:20,0:20:16.19:592,16,0	1/1:24,0:24:51.47:649,51,0	1/1:22,0:22:40.37:670,40,0	0/0:10,0:10:29.92:0,30,606	0/0:41,0:41:99:0,123,3971	1/1:28,0:28:76.90:708,77,0	1/1:36,0:36:99:1102,108,0	1/1:23,0:23:68.90:728,69,0	1/1:3,0:3:9.02:87,9,0
chr10	65834034	.	GA	G	12780.53	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=19.180;DP=619;FS=0.000;HRun=1;HaplotypeScore=226.4762;InbreedingCoeff=0.9484;MQ=71.28;MQ0=0;MQRankSum=-18.661;QD=33.63;ReadPosRankSum=1.362;VQSLOD=4.2520;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,147,2325	1/1:1,9:10:27.07:340,27,0	0/0:18,0:18:53.83:0,54,711	0/0:18,0:18:44.36:0,44,625	0/0:15,0:15:36.08:0,36,526	1/1:2,17:19:50.73:612,51,0	1/1:0,24:24:72.23:922,72,0	1/1:3,11:14:39.04:500,39,0	0/0:34,0:34:99:0,102,1630	1/1:1,18:19:57.18:734,57,0	1/1:0,11:11:14.88:178,15,0	1/1:3,25:28:81.25:1010,81,0	0/0:34,0:34:99:0,99,1576	1/1:1,22:23:62.96:781,63,0	1/1:3,21:24:66.17:804,66,0	1/1:0,24:24:65.42:801,65,0	1/1:0,13:13:30.07:383,30,0	0/0:17,0:17:0.60:0,1,85	1/1:0,17:16:48.16:633,48,0	1/1:1,20:21:49.54:631,50,0	1/1:3,22:25:48.12:604,48,0	1/1:3,19:22:54.08:645,54,0	0/0:11,1:12:18.95:0,19,309	0/0:40,0:40:99:0,120,1911	1/1:2,25:27:78.17:961,78,0	1/1:2,32:34:99:1285,99,0	1/1:2,20:22:66.21:838,66,0	1/1:0,3:3:9.03:118,9,0
chr10	65834038	.	A	ACTT	21565.52	PASS	AB=0.909;AC=39;AF=0.696;AN=56;BaseQRankSum=17.941;DP=613;FS=3.622;HRun=0;HaplotypeScore=212.0558;InbreedingCoeff=0.9068;MQ=72.01;MQ0=0;MQRankSum=-18.599;QD=55.30;ReadPosRankSum=0.325;VQSLOD=4.7381;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,141,2584	1/1:1,9:10:30.10:594,30,0	0/0:21,0:21:59.84:0,60,1009	0/0:15,0:15:38.89:0,39,667	0/0:14,0:14:39.13:0,39,727	1/1:1,17:18:51.17:1081,51,0	1/1:0,24:24:72.24:1407,72,0	1/1:4,11:15:31.58:748,32,0	0/0:33,0:33:99:0,99,1812	1/1:1,18:19:54.02:1206,54,0	1/1:0,11:11:18.94:306,19,0	1/1:1,25:26:78.25:1689,78,0	0/0:35,0:35:99:0,105,1895	1/1:2,21:23:63.04:1386,63,0	1/1:4,20:24:69.05:1443,69,0	1/1:3,21:24:69.21:1429,69,0	1/1:1,13:14:32.93:644,33,0	0/0:16,0:16:14.92:0,15,112	1/1:2,16:17:51.17:1111,51,0	1/1:1,20:21:60.67:1173,61,0	1/1:4,21:25:54.59:900,55,0	1/1:2,18:21:57.02:1041,57,0	0/1:9,1:10:32.64:33,0,313	0/0:41,0:41:99:0,123,2284	1/1:3,25:28:77.88:1660,78,0	1/1:1,32:33:99:2226,99,0	1/1:2,20:22:59.93:1264,60,0	1/1:1,3:4:12.01:225,12,0
chr10	65834457	.	A	AT	15778.52	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-16.710;DP=675;FS=0.293;HRun=1;HaplotypeScore=65.5518;InbreedingCoeff=0.9908;MQ=75.28;MQ0=0;MQRankSum=0.181;QD=38.67;ReadPosRankSum=1.364;VQSLOD=5.3991;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:55:99:0,159,2027	1/1:0,8:8:21.07:313,21,0	0/0:11,0:11:29.15:0,29,318	0/0:21,0:21:47.28:0,47,440	0/0:21,0:21:61.06:0,61,752	1/1:0,29:29:78.26:1166,78,0	1/1:0,14:14:39.13:583,39,0	1/1:1,35:36:99:1430,105,0	1/1:0,25:25:57.19:851,57,0	0/0:23,0:23:66.19:0,66,839	0/0:30,0:30:90.27:0,90,1136	1/1:1,13:14:30.10:449,30,0	0/0:16,0:16:48.16:0,48,621	1/1:0,24:24:66.22:986,66,0	1/1:2,32:34:90.30:1346,90,0	0/0:27,0:27:81.19:0,81,965	1/1:0,27:27:75.25:1121,75,0	0/0:24,1:25:8.96:0,9,182	1/1:0,29:30:90.24:1259,90,0	1/1:1,21:22:54.05:731,54,0	1/1:2,15:17:42.14:627,42,0	1/1:0,19:19:57.19:841,57,0	0/0:15,0:15:45.13:0,45,559	0/0:22,0:22:66.17:0,66,821	1/1:1,21:22:48.16:714,48,0	1/1:1,25:26:39.36:1059,39,0	1/1:0,41:41:99:1700,114,0	1/1:7,13:20:42.13:603,42,0
chr10	65834826	.	TCCAACGTTA	T	992.36	PASS	AB=0.952;AC=3;AF=0.054;AN=56;BaseQRankSum=5.720;DP=589;FS=7.352;HRun=0;HaplotypeScore=161.2456;InbreedingCoeff=0.6362;MQ=89.13;MQ0=0;MQRankSum=-5.442;QD=24.81;ReadPosRankSum=2.708;VQSLOD=2.1957;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,105,4761	0/0:12,0:12:36.12:0,36,1708	0/0:16,0:16:45.15:0,45,2015	0/0:32,0:32:89.49:0,89,3727	0/0:20,0:20:57.20:0,57,2587	0/0:16,0:16:48.16:0,48,2300	0/0:32,0:32:96.30:0,96,4412	0/0:22,0:22:60.20:0,60,2744	0/0:23,0:23:66.23:0,66,3035	0/0:25,0:25:72.24:0,72,3147	0/0:16,0:16:48.15:0,48,1974	0/0:27,0:27:81.26:0,81,3667	0/0:19,0:19:57.18:0,57,2616	0/0:13,0:13:36.12:0,36,1531	0/0:15,0:15:42.14:0,42,1954	0/0:26,0:26:78.27:0,78,3769	0/1:19,1:20:35.73:36,0,2302	1/1:4,16:20:36.12:1063,36,0	0/0:18,0:18:54.17:0,54,2496	0/0:20,0:20:60.21:0,60,2733	0/0:53,0:53:99:0,153,7195	0/0:6,0:6:18.06:0,18,819	0/0:9,0:9:27.09:0,27,1302	0/0:43,0:43:99:0,126,5812	0/0:12,0:12:36.12:0,36,1672	0/0:17,0:17:45.15:0,45,1985	0/0:16,0:16:48.16:0,48,2270	0/0:5,0:5:15.05:0,15,729
chr10	65835047	.	GGA	G	64.93	PASS	AB=0.942;AC=4;AF=0.074;AN=54;BaseQRankSum=1.237;DP=541;FS=6.200;HRun=0;HaplotypeScore=95.8024;InbreedingCoeff=0.1625;MQ=72.59;MQ0=11;MQRankSum=2.626;QD=0.87;ReadPosRankSum=1.019;VQSLOD=1.4098;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:40,6:46:99:136,0,990	0/0:2,0:2:2.92:0,3,17	0/0:42,0:27:10.67:0,11,42	0/0:53,0:25:10.99:0,11,98	0/0:24,0:24:22.67:0,23,741	0/0:11,0:11:3.01:0,3,32	0/0:19,0:19:1.13:0,1,19	0/0:28,0:28:17.58:0,18,158	0/0:24,0:24:24.94:0,25,324	1/1:18,0:18:0.31:6,0,0	./.	0/0:15,0:15:5.50:0,5,47	0/0:33,0:32:60.17:0,60,894	0/0:13,0:13:3.47:0,3,27	0/0:19,0:19:14.51:0,15,99	0/0:12,0:11:0:0,0,0	0/0:10,0:10:0.91:0,1,19	0/0:15,0:15:4.38:0,4,23	0/0:16,0:14:14.28:0,14,122	0/1:11,0:11:4.10:4,0,19	0/0:14,0:13:0.94:0,1,2	0/0:18,0:18:5.56:0,6,61	0/0:13,0:14:21.07:0,21,316	0/0:21,1:22:10.49:0,10,603	0/0:13,0:13:0.43:0,0,1	0/0:20,0:19:17.78:0,18,137	0/0:8,0:8:8.25:0,8,49	0/0:11,0:11:9.36:0,9,52
chr10	65835106	.	CAGAG	C	3057.64	PASS	AB=0.850;AC=24;AF=0.462;AN=52;BaseQRankSum=6.247;DP=426;FS=11.908;HRun=0;HaplotypeScore=112.9169;InbreedingCoeff=0.6491;MQ=57.13;MQ0=12;MQRankSum=0.925;QD=16.26;ReadPosRankSum=0.028;VQSLOD=2.8174;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:40:99:0,99,2199	1/1:8,0:8:21.84:244,22,0	0/0:5,0:3:3:0,3,65	0/0:19,0:10:11.38:0,11,168	0/0:14,0:13:33.04:0,33,516	0/1:11,0:11:30.95:247,0,31	1/1:19,0:18:2.94:20,3,0	0/0:28,0:19:48.08:0,48,954	0/0:29,0:29:63.10:0,63,1287	./.	./.	1/1:13,0:12:23.54:329,24,0	0/0:23,0:21:52.28:0,52,802	1/1:15,0:15:11.11:125,11,0	1/1:23,0:23:38.17:529,38,0	0/0:1,0:1:3.01:0,3,60	1/1:13,0:13:29.92:304,30,0	0/0:7,0:7:12.49:0,12,162	0/1:8,6:11:39.77:152,0,40	0/0:4,15:18:2.94:0,3,18	1/1:13,0:12:1.12:266,1,0	1/1:13,0:11:19.44:262,19,0	0/0:17,0:16:30.10:0,30,620	0/0:26,0:25:66.13:0,66,1265	0/0:1,7:8:0:0,0,0	1/1:5,15:18:22.96:362,23,0	1/1:12,0:12:16.77:191,17,0	1/1:14,0:14:5.88:216,6,0
chr10	65835110	.	G	GAC	2117.96	PASS	AB=1.000;AC=24;AF=0.429;AN=56;BaseQRankSum=6.529;DP=451;FS=16.653;HRun=0;HaplotypeScore=109.7090;InbreedingCoeff=0.4950;MQ=57.71;MQ0=14;MQRankSum=1.676;QD=10.92;ReadPosRankSum=2.052;VQSLOD=2.1860;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:41:99:0,99,1407	1/1:8,0:8:21.72:158,22,0	0/0:13,0:6:10.02:0,10,115	0/0:23,0:13:4.70:0,5,142	0/0:15,0:14:36.03:0,36,434	0/1:12,0:12:8.38:175,0,8	1/1:4,14:17:2.94:56,3,0	0/0:26,0:17:51.08:0,51,709	0/0:29,0:29:62.87:0,63,890	0/0:6,0:6:11.87:0,12,68	0/1:4,0:4:0.86:1,0,20	1/1:13,0:12:23.92:212,24,0	0/0:24,0:22:55.35:0,55,736	1/1:15,0:15:14.87:108,15,0	1/1:20,0:20:38.63:404,39,0	0/1:6,0:6:10.21:10,0,61	1/1:13,0:13:32.89:283,33,0	0/0:8,0:8:17.72:0,18,161	0/1:15,0:12:65.71:78,0,66	0/0:20,0:18:2.95:0,3,19	1/1:13,0:12:0.04:172,0,0	0/1:13,0:11:0.01:166,0,0	0/0:17,0:16:30.10:0,30,450	0/0:26,0:25:66.13:0,66,936	0/0:8,0:8:0:0,0,0	0/1:20,0:18:6.73:220,0,7	1/1:11,0:11:17.18:140,17,0	1/1:13,0:13:3.05:117,3,0
chr10	65835450	.	T	TC	2391.53	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-7.774;DP=647;FS=0.488;HRun=3;HaplotypeScore=63.9086;InbreedingCoeff=0.9899;MQ=91.81;MQ0=0;MQRankSum=-0.640;QD=34.16;ReadPosRankSum=1.413;VQSLOD=4.2148;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:56:99:0,147,1763	0/0:8,0:8:21.06:0,21,252	0/0:30,0:30:71.01:0,71,817	0/0:25,0:25:45.52:0,46,617	0/0:12,0:12:27.08:0,27,323	0/0:18,0:18:45.14:0,45,539	0/0:29,0:29:84.17:0,84,972	0/0:30,0:30:72.22:0,72,863	0/0:20,0:20:57.16:0,57,673	1/1:1,17:18:51.17:701,51,0	1/1:0,6:6:12.04:168,12,0	0/0:32,0:32:81.25:0,81,972	0/0:19,0:19:54.17:0,54,647	0/0:28,0:28:72.22:0,72,864	0/0:24,0:24:63.19:0,63,756	1/1:0,15:15:39.13:546,39,0	0/0:27,0:27:81.25:0,81,971	1/1:1,30:31:81.27:1134,81,0	0/0:19,0:19:51.15:0,51,601	0/0:15,0:15:39.12:0,39,468	0/0:35,0:35:77.85:0,78,1062	0/0:21,0:21:48.15:0,48,576	0/0:14,0:14:39.12:0,39,466	0/0:24,0:24:72.22:0,72,864	0/0:20,0:20:57.17:0,57,684	0/0:25,0:25:72.22:0,72,864	0/0:24,0:24:69.21:0,69,828	0/0:22,0:22:60.18:0,60,718
chr10	65837677	.	G	GA	659.46	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-5.832;DP=262;FS=0.000;HRun=2;HaplotypeScore=28.2946;InbreedingCoeff=0.9041;MQ=115.51;MQ0=0;MQRankSum=-2.238;QD=25.36;ReadPosRankSum=1.990;VQSLOD=3.2740;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:27.06:0,27,322	0/0:3,0:3:9.03:0,9,117	0/0:30,0:29:87.20:0,87,1064	0/0:17,0:17:38.69:0,39,481	0/0:10,0:10:30.09:0,30,376	0/0:5,0:5:15.05:0,15,194	0/0:11,0:11:33.11:0,33,428	0/0:7,0:7:18.06:0,18,233	0/0:15,0:15:45.14:0,45,567	1/1:1,3:4:9.03:135,9,0	1/1:0,6:6:15.05:225,15,0	0/0:8,0:8:24.06:0,24,287	0/0:7,0:7:21.07:0,21,273	0/0:9,0:9:21.07:0,21,273	0/0:5,0:5:15.05:0,15,195	1/1:0,7:7:18.06:270,18,0	0/0:15,0:15:42.14:0,42,545	1/1:1,8:9:12.04:180,12,0	0/0:5,0:5:15.04:0,15,183	0/0:10,0:10:30.06:0,30,349	0/0:14,0:14:39.13:0,39,506	0/0:5,0:5:15.05:0,15,195	0/0:6,0:6:12.04:0,12,156	0/0:10,0:10:30.10:0,30,389	0/0:6,0:6:18.06:0,18,233	0/0:12,0:12:36.12:0,36,466	0/0:13,0:13:39.13:0,39,506	0/0:3,0:3:9.03:0,9,117
chr10	65837855	.	GT	G	1364.10	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=5.513;DP=347;FS=16.352;HRun=8;HaplotypeScore=40.1750;InbreedingCoeff=0.9717;MQ=76.63;MQ0=0;MQRankSum=1.302;QD=25.26;ReadPosRankSum=1.105;VQSLOD=2.3514;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:87.12:0,87,1005	0/0:7,0:7:21.06:0,21,254	0/0:16,0:15:37.35:0,37,426	0/0:13,0:12:18.46:0,18,220	0/0:8,0:8:24.07:0,24,290	0/0:12,0:12:36.06:0,36,408	0/0:19,0:19:42.08:0,42,468	0/0:9,0:9:27.08:0,27,326	0/0:16,0:16:45.14:0,45,541	1/1:0,13:13:39.06:376,39,0	1/1:0,9:9:27.04:261,27,0	0/0:12,0:12:36.07:0,36,418	0/0:8,0:8:24.07:0,24,290	0/0:12,0:12:36.07:0,36,418	0/0:11,0:11:33.10:0,33,397	1/1:0,13:13:36.01:337,36,0	0/0:22,0:22:66.20:0,66,797	1/1:0,19:19:57.09:550,57,0	0/0:9,0:9:27.04:0,27,308	0/0:12,0:12:36.11:0,36,435	0/0:10,0:10:30.08:0,30,352	0/0:13,0:13:39.12:0,39,465	0/0:10,0:10:27.08:0,27,326	0/0:13,1:14:10.14:0,10,395	0/0:11,0:11:33.10:0,33,399	0/0:9,0:9:27.08:0,27,326	0/0:7,0:7:21.06:0,21,254	0/0:4,0:4:12.04:0,12,145
chr10	65837980	.	AACACACACAC	A	6050.52	PASS	AC=32;AF=0.640;AN=50;BaseQRankSum=5.299;DP=492;FS=2.036;HRun=0;HaplotypeScore=138.8998;InbreedingCoeff=0.8055;MQ=58.09;MQ0=8;MQRankSum=-8.238;QD=21.38;ReadPosRankSum=1.402;VQSLOD=3.7728;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:33:42.14:0,42,1809	1/1:1,0:1:3.01:31,3,0	0/0:21,0:8:2.22:0,2,7	./.	0/0:4,0:5:12.04:0,12,540	1/1:4,0:7:12:243,12,0	1/1:12,6:18:6.02:180,6,0	1/1:17,0:17:8.34:132,8,0	1/1:11,0:22:21.07:489,21,0	0/0:9,0:8:9.03:0,9,288	./.	1/1:5,6:12:18.06:519,18,0	0/0:16,0:18:42.14:0,42,1862	1/1:8,15:24:27.09:748,27,0	1/1:12,17:31:36.08:933,36,0	0/0:3,0:22:23.63:0,24,1015	1/1:17,10:27:6.02:180,6,0	0/0:9,0:13:12.89:0,13,167	1/1:9,8:17:18.39:462,18,0	1/1:4,5:10:15.05:429,15,0	1/1:37,17:54:3.01:90,3,0	1/1:2,6:8:8.99:200,9,0	0/0:7,0:7:12.04:0,12,481	0/0:33,0:37:87.30:0,87,3893	1/1:6,3:9:6.02:180,6,0	1/1:4,10:16:30.04:788,30,0	1/1:3,7:10:15.05:449,15,0	./.
chr10	65837984	.	C	CAT	221.28	PASS	AB=0.781;AC=2;AF=0.037;AN=54;BaseQRankSum=2.501;DP=487;FS=12.388;HRun=0;HaplotypeScore=105.4108;InbreedingCoeff=0.1191;MQ=52.89;MQ0=10;MQRankSum=-0.952;QD=6.51;ReadPosRankSum=2.189;VQSLOD=2.2931;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:36:74.88:0,75,701	0/0:1,0:1:2.98:0,3,22	0/0:21,0:6:4.86:0,5,37	0/0:29,0:11:26.64:0,27,250	0/0:4,0:4:12.02:0,12,160	0/0:6,0:6:11.92:0,12,89	0/0:16,0:16:20.09:0,20,140	0/0:17,0:17:47.77:0,48,385	0/0:21,0:21:47.49:0,47,333	0/1:3,6:8:4.21:99,0,4	./.	0/0:11,0:11:23.83:0,24,171	0/0:19,0:19:31.13:0,31,534	0/0:22,0:22:38.73:0,39,279	0/0:31,0:31:56.40:0,56,411	0/1:24,1:25:17.22:210,0,17	0/0:27,0:27:33.20:0,33,238	0/0:14,0:14:14.19:0,14,133	0/0:15,0:15:41.54:0,42,321	0/0:10,0:10:23.85:0,24,174	0/0:52,0:52:44.87:0,45,354	0/0:7,0:7:8.92:0,9,61	0/0:7,0:7:17.85:0,18,155	0/0:36,0:37:82.20:0,82,1203	0/0:8,0:8:17.86:0,18,132	0/0:17,0:17:41.71:0,42,305	0/0:10,0:10:23.85:0,24,175	0/0:2,0:2:5.94:0,6,42
chr10	65840095	.	AG	A	10797.76	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=19.466;DP=769;FS=21.184;HRun=6;HaplotypeScore=107.6433;InbreedingCoeff=0.9993;MQ=84.06;MQ0=0;MQRankSum=-4.141;QD=28.34;ReadPosRankSum=4.114;VQSLOD=3.2474;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,120,1548	1/1:1,14:15:39.10:419,39,0	0/0:30,0:30:56.64:0,57,878	0/0:31,0:31:64.70:0,65,904	0/0:31,0:31:90.24:0,90,1126	1/1:2,15:17:42.10:451,42,0	1/1:1,27:28:75.19:806,75,0	0/0:40,0:39:99:0,102,1291	0/0:24,0:24:60.18:0,60,775	0/0:24,0:24:63.19:0,63,795	0/0:24,0:24:66.20:0,66,840	1/1:1,21:22:63.16:676,63,0	0/0:28,0:28:78.25:0,78,1022	1/1:0,21:21:60.15:644,60,0	1/1:1,31:32:93.23:999,93,0	0/0:30,0:30:84.25:0,84,1072	1/1:3,32:35:96.20:1019,96,0	0/0:30,2:32:22.77:0,23,981	1/1:2,15:17:44.82:418,45,0	1/1:2,26:28:75.09:779,75,0	1/1:4,55:59:99:1676,156,0	1/1:3,24:27:23.68:605,24,0	0/0:21,0:21:54.17:0,54,695	0/0:31,0:31:84.27:0,84,1103	1/1:1,21:22:57.14:612,57,0	1/1:4,22:26:66.14:694,66,0	1/1:0,19:19:54.14:580,54,0	1/1:0,13:13:39.10:419,39,0
chr10	65840517	.	A	AT	8707.38	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=-13.010;DP=643;FS=1.403;HRun=9;HaplotypeScore=61.9753;InbreedingCoeff=0.9668;MQ=75.73;MQ0=0;MQRankSum=-2.106;QD=24.32;ReadPosRankSum=1.557;VQSLOD=5.7143;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:68.94:0,69,594	1/1:0,12:12:33.09:365,33,0	0/0:15,0:15:26.96:0,27,229	0/0:22,0:22:38.74:0,39,279	0/0:17,0:18:47.01:0,47,397	1/1:1,13:14:36.10:398,36,0	1/1:2,21:23:57.15:631,57,0	0/0:37,0:37:86.92:0,87,749	1/1:1,25:26:66.18:729,66,0	0/0:28,1:29:44.80:0,45,618	0/0:16,0:16:41.97:0,42,360	1/1:3,19:22:42.11:465,42,0	0/0:26,0:26:77.98:0,78,677	1/1:1,18:19:43.36:467,43,0	1/1:7,10:17:1.02:239,1,0	0/0:19,0:19:56.99:0,57,495	1/1:4,40:45:99:1209,111,0	0/0:23,1:24:20.79:0,21,410	1/1:10,17:27:50.17:536,50,0	1/1:2,19:21:53.80:564,54,0	1/1:3,20:23:48.13:531,48,0	1/1:5,21:26:54.14:595,54,0	0/0:24,0:24:65.98:0,66,573	0/0:28,0:28:80.98:0,81,703	1/1:2,16:18:45.12:498,45,0	1/1:5,20:26:39.95:644,40,0	1/1:2,20:22:25.24:505,25,0	1/1:2,15:17:30.08:332,30,0
chr10	65841916	.	G	GTC	2195.55	PASS	AB=0.833;AC=37;AF=0.685;AN=54;BaseQRankSum=2.052;DP=669;FS=34.977;HRun=0;HaplotypeScore=115.5706;InbreedingCoeff=0.4712;MQ=61.97;MQ0=19;MQRankSum=-1.365;QD=4.24;ReadPosRankSum=-4.778;VQSLOD=-0.3913;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:45:33.62:0,34,288	1/1:13,0:13:12.49:139,12,0	0/1:42,0:14:0:0,0,0	0/1:48,0:22:0:0,0,0	0/0:16,0:16:9.02:0,9,98	1/1:13,6:20:3.01:45,3,0	1/1:32,0:32:9:112,9,0	1/1:36,0:36:12.80:87,13,0	0/0:11,0:20:17.04:0,17,84	1/1:29,0:28:21.45:186,21,0	1/1:10,0:9:3:25,3,0	0/1:7,8:17:20.50:85,0,21	0/0:8,0:9:10.08:0,10,72	1/1:14,6:20:2.87:45,3,0	1/1:27,0:26:14.94:183,15,0	1/1:21,0:29:18:156,18,0	0/1:12,1:26:13.60:144,0,14	1/1:11,0:10:5.99:49,6,0	./.	1/1:11,1:16:3:26,3,0	1/1:32,0:31:21.01:226,21,0	0/1:20,0:23:24.77:37,0,25	0/0:10,0:10:6.02:0,6,65	0/0:25,0:28:26.74:0,27,256	1/1:17,0:17:3:25,3,0	1/1:36,0:36:18.87:456,19,0	1/1:15,3:17:4.37:176,4,0	1/1:14,0:15:15.01:163,15,0
chr10	65842966	.	G	GC	20731.67	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-17.194;DP=785;FS=10.341;HRun=2;HaplotypeScore=72.1686;InbreedingCoeff=0.9999;MQ=86.11;MQ0=0;MQRankSum=-4.867;QD=38.46;ReadPosRankSum=4.477;VQSLOD=4.8990;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,123,1483	1/1:0,16:16:45.11:624,45,0	0/0:15,0:15:36.11:0,36,435	0/0:34,0:34:86.88:0,87,980	0/0:19,0:19:51.16:0,51,632	1/1:0,21:21:57.19:811,57,0	1/1:0,33:33:84.09:1209,84,0	0/0:32,0:32:84.11:0,84,987	1/1:0,26:26:69.23:993,69,0	1/1:0,31:31:93.30:1319,93,0	1/1:0,20:20:54.18:777,54,0	1/1:1,43:44:99:1771,123,0	0/0:34,0:34:96.29:0,96,1176	1/1:1,36:37:90.30:1295,90,0	1/1:0,33:35:96.30:1355,96,0	1/1:1,27:28:75.23:1080,75,0	1/1:4,37:41:99:1554,108,0	0/0:27,0:27:78.25:0,78,967	1/1:0,21:21:63.18:869,63,0	1/1:0,17:17:51.17:732,51,0	1/1:3,53:56:99:2073,144,0	1/1:0,22:22:51.17:734,51,0	0/0:24,0:24:63.18:0,63,767	0/0:19,0:19:48.15:0,48,595	1/1:1,21:22:54.18:770,54,0	1/1:0,28:28:84.23:1167,84,0	1/1:0,31:31:81.23:1166,81,0	1/1:0,10:10:30.10:432,30,0
chr10	65843788	.	ATG	A	14440.60	PASS	AB=0.977;AC=39;AF=0.696;AN=56;BaseQRankSum=14.684;DP=859;FS=4.008;HRun=0;HaplotypeScore=116.9645;InbreedingCoeff=0.9455;MQ=59.00;MQ0=9;MQRankSum=1.592;QD=24.85;ReadPosRankSum=6.825;VQSLOD=5.2628;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:43:97.04:0,97,1555	1/1:2,10:12:21.07:273,21,0	0/1:42,1:22:2.44:2,0,497	0/0:41,0:18:33.16:0,33,524	0/0:29,0:29:72.25:0,72,1214	1/1:3,23:26:33.11:429,33,0	1/1:2,24:26:57.05:741,57,0	0/0:42,0:42:99:0,105,1618	1/1:3,26:29:69.22:892,69,0	1/1:2,38:40:99:1391,108,0	1/1:2,16:18:32.95:429,33,0	1/1:3,25:28:57.18:741,57,0	0/0:38,0:38:96.31:0,96,1594	1/1:0,25:24:51.17:663,51,0	1/1:4,42:46:96.24:1227,96,0	1/1:2,37:38:90.29:1170,90,0	1/1:5,26:30:57.19:741,57,0	0/0:34,0:33:87.07:0,87,1399	1/1:4,16:19:48.05:554,48,0	1/1:3,18:21:27.09:351,27,0	1/1:5,46:51:99:1365,105,0	1/1:3,18:21:36.12:468,36,0	0/0:20,0:20:53.92:0,54,832	0/0:29,0:28:84.27:0,84,1390	1/1:2,17:19:30.10:390,30,0	1/1:5,37:42:99:1365,105,0	1/1:2,31:33:72.23:936,72,0	1/1:0,11:11:24.08:312,24,0
chr10	65844598	.	C	CCT	814.94	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=-4.692;DP=700;FS=17.714;HRun=0;HaplotypeScore=120.3210;InbreedingCoeff=0.6852;MQ=72.41;MQ0=2;MQRankSum=-0.219;QD=16.98;ReadPosRankSum=-5.023;VQSLOD=1.2781;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:44:68.05:0,68,1123	0/1:13,0:13:7.44:7,0,370	0/0:30,0:29:54.10:0,54,646	0/0:23,0:19:36.04:0,36,416	0/0:32,0:32:84.25:0,84,1020	0/0:22,0:22:54.17:0,54,665	0/0:23,0:23:57.18:0,57,701	1/1:14,20:34:60.18:908,60,0	0/0:24,0:24:66.21:0,66,812	0/0:26,0:26:69.22:0,69,850	0/0:14,0:14:27.03:0,27,303	0/0:24,0:24:63.20:0,63,774	0/0:27,0:27:66.21:0,66,810	0/0:19,0:19:42.13:0,42,517	0/0:39,0:39:99:0,102,1256	0/0:29,0:29:66.19:0,66,800	0/0:29,0:30:83.88:0,84,971	0/0:18,0:18:37.93:0,38,448	0/0:17,0:17:39.11:0,39,468	0/0:22,0:22:48.15:0,48,591	0/0:34,0:34:87.26:0,87,1056	0/0:18,0:18:36.09:0,36,419	0/0:16,0:16:36.11:0,36,443	0/0:30,0:29:75.22:0,75,910	0/0:21,0:21:51.14:0,51,613	0/0:28,0:28:65.33:0,65,810	0/0:28,0:28:81.25:0,81,996	0/0:12,0:12:27.08:0,27,332
chr10	65845396	.	G	GA	1706.87	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=-3.158;DP=667;FS=1.449;HRun=0;HaplotypeScore=104.4877;InbreedingCoeff=0.2095;MQ=88.23;MQ0=0;MQRankSum=-3.661;QD=8.53;ReadPosRankSum=-10.872;VQSLOD=0.3441;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,102,1290	0/0:12,0:12:25.61:0,26,78	0/0:25,1:26:75.01:0,75,917	0/0:23,0:23:65.88:0,66,749	0/0:13,0:13:39.06:0,39,497	0/1:27,0:27:96.15:98,0,96	0/1:25,0:25:65.08:65,0,74	1/1:8,22:30:84.17:1117,84,0	0/1:21,0:21:19.12:19,0,88	0/1:27,0:27:6:6,0,117	0/0:23,0:23:24.91:0,25,125	0/0:18,0:18:8.56:0,9,66	0/0:24,0:24:69.21:0,69,938	0/0:23,0:23:29.71:0,30,151	0/0:34,0:34:41.18:0,41,163	0/0:33,0:33:66.41:0,66,217	0/0:31,0:31:66.99:0,67,208	1/1:3,10:13:36.05:475,36,0	0/1:19,0:19:22.44:22,0,36	0/0:26,0:26:26.72:0,27,159	0/1:28,0:28:56.01:56,0,77	0/0:15,0:15:8.28:0,8,66	0/0:10,0:10:30.10:0,30,417	0/0:27,0:27:81.26:0,81,1113	0/0:24,0:23:1.91:0,2,84	0/0:39,0:39:36.27:0,36,195	0/0:29,0:29:40.20:0,40,161	0/1:10,0:10:0.70:1,0,41
chr10	65845407	.	CG	C	1459.21	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.570;DP=687;FS=0.000;HRun=1;HaplotypeScore=104.5828;InbreedingCoeff=0.9986;MQ=89.59;MQ0=0;MQRankSum=-6.063;QD=38.40;ReadPosRankSum=-3.101;VQSLOD=2.6291;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,105,1669	0/0:13,0:13:39.12:0,39,596	0/0:30,0:30:81.26:0,81,1290	0/0:23,0:23:66.18:0,66,969	0/0:20,0:20:60.17:0,60,911	0/0:29,0:29:81.25:0,81,1264	0/0:23,0:23:69.22:0,69,1078	1/1:1,29:30:90.30:1245,90,0	0/0:25,0:25:72.23:0,72,1118	0/0:31,0:31:90.30:0,90,1403	0/0:24,0:24:72.23:0,72,1119	0/0:18,0:18:54.18:0,54,854	0/0:24,0:24:72.25:0,72,1145	0/0:23,0:23:69.24:0,69,1102	0/0:34,0:34:99:0,102,1629	0/0:34,0:34:99:0,102,1573	0/0:32,0:32:93.28:0,93,1430	1/1:0,8:8:24.08:335,24,0	0/0:18,0:18:51.17:0,51,811	0/0:27,0:27:81.22:0,81,1239	0/0:29,0:29:87.30:0,87,1390	0/0:16,0:16:48.16:0,48,767	0/0:14,0:14:42.14:0,42,670	0/0:28,0:28:84.29:0,84,1342	0/0:25,0:24:75.26:0,75,1198	0/0:35,0:35:99:0,102,1629	0/0:28,0:28:81.23:0,81,1251	0/0:10,0:10:30.10:0,30,479
chr10	65846901	.	AGTGTGTGTGTGT	A	3484.90	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=5.224;DP=628;FS=0.613;HRun=0;HaplotypeScore=215.5287;InbreedingCoeff=0.8525;MQ=66.02;MQ0=9;MQRankSum=-4.855;QD=51.25;ReadPosRankSum=2.660;VQSLOD=3.3380;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:35:54.15:0,54,2831	0/0:6,0:10:12.84:0,13,393	0/0:34,0:18:9.03:0,9,358	0/0:34,0:25:24.08:0,24,1000	0/0:25,0:28:54.06:0,54,2558	0/0:13,0:22:23.92:0,24,1120	0/0:21,0:24:11.08:0,11,562	0/0:27,0:27:54.19:0,54,2063	0/0:7,0:14:21.07:0,21,1033	1/1:5,15:21:45.12:1150,45,0	1/1:10,13:25:39.89:998,40,0	0/0:17,0:17:26.98:0,27,1233	0/0:17,0:18:42.14:0,42,2132	0/0:25,0:25:23.91:0,24,1144	0/0:11,0:15:3.01:0,3,157	1/1:7,14:21:39.13:1337,39,0	0/0:21,0:33:12.91:0,13,1261	0/0:13,0:30:42.12:0,42,1773	0/0:20,0:20:21.96:0,22,1045	0/0:13,0:21:20.79:0,21,818	0/0:23,0:23:21.78:0,22,743	0/0:14,0:14:18.03:0,18,645	0/0:15,0:15:29.56:0,30,1673	0/0:17,0:17:36.12:0,36,1689	0/0:15,0:21:18.05:0,18,522	0/0:31,0:34:57.20:0,57,2476	0/0:18,0:18:31.62:0,32,992	0/0:5,0:6:6.02:0,6,221
chr10	65847742	.	G	GCCGTGGCTGGGTT	5286.93	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=0.659;DP=536;FS=6.311;HRun=0;HaplotypeScore=195.3798;InbreedingCoeff=0.9429;MQ=84.65;MQ0=0;MQRankSum=-8.098;QD=59.40;ReadPosRankSum=-3.724;VQSLOD=3.0190;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,108,3880	0/0:6,0:6:9.03:0,9,337	0/0:21,0:21:45.14:0,45,957	0/0:13,0:13:18.06:0,18,506	0/0:20,0:20:33.11:0,33,1169	0/0:17,0:17:30.10:0,30,942	0/0:31,0:31:66.21:0,66,2240	1/1:26,0:26:24.08:1109,24,0	1/1:11,2:13:33.11:1546,33,0	1/1:15,3:19:24.04:752,24,0	1/1:8,0:8:6.01:202,6,0	0/0:23,0:23:51.16:0,51,1749	0/0:16,0:16:33.11:0,33,1093	0/0:19,0:19:51.16:0,51,1666	0/0:9,0:9:21.07:0,21,787	1/1:7,0:7:9.03:528,9,0	0/0:49,0:49:99:0,114,3723	1/1:16,0:16:21.07:1151,21,0	0/0:7,0:7:12.02:0,12,262	0/0:18,0:18:36.12:0,36,1075	0/0:12,0:12:27.09:0,27,784	0/0:21,0:21:24.07:0,24,693	0/0:19,0:19:36.12:0,36,1222	0/0:33,0:33:75.26:0,75,2662	0/0:17,0:17:27.09:0,27,978	0/0:23,0:23:45.15:0,45,1502	0/0:13,0:13:30.10:0,30,1073	0/0:10,0:10:27.09:0,27,996
chr10	65847757	.	C	CGTGGCTGGGTTCT	4015.72	PASS	AB=1.000;AC=10;AF=0.179;AN=56;BaseQRankSum=0.250;DP=523;FS=0.000;HRun=0;HaplotypeScore=186.1792;InbreedingCoeff=0.7272;MQ=90.41;MQ0=0;MQRankSum=-8.135;QD=47.81;ReadPosRankSum=-1.696;VQSLOD=3.0259;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,120,4215	0/0:6,0:6:15.03:0,15,406	0/0:26,0:26:74.63:0,75,1382	0/0:17,0:17:22.17:0,22,602	0/0:17,0:17:39.12:0,39,1383	0/0:15,0:15:30.10:0,30,991	0/0:31,0:31:84.13:0,84,2491	0/1:21,0:21:99:731,0,159	0/1:14,0:14:99:312,0,177	1/1:10,0:10:29.20:631,29,0	1/1:4,0:4:8.95:91,9,0	0/0:18,0:18:51.16:0,51,1827	0/0:16,0:16:38.95:0,39,1140	0/0:23,0:23:69.13:0,69,1893	0/0:11,0:11:30.08:0,30,903	1/1:1,11:16:12.04:708,12,0	0/0:46,0:46:99:0,126,4041	1/1:7,8:19:27.09:1543,27,0	0/0:11,0:11:26.92:0,27,395	0/0:17,0:17:45.06:0,45,1182	0/0:15,0:15:39:0,39,981	0/0:18,0:18:38.82:0,39,825	0/0:20,0:20:45.09:0,45,1344	0/0:30,0:30:84.18:0,84,2839	0/0:12,0:12:33.07:0,33,1087	0/0:22,0:22:30.93:0,31,1656	0/0:13,0:13:39.02:0,39,1180	0/0:11,0:11:33:0,33,1093
chr10	65847943	.	A	AG	1336.14	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-7.530;DP=594;FS=12.585;HRun=2;HaplotypeScore=65.5078;InbreedingCoeff=0.9531;MQ=85.13;MQ0=0;MQRankSum=0.098;QD=40.49;ReadPosRankSum=-4.433;VQSLOD=1.0675;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:90.27:0,90,1145	0/0:13,0:13:39.13:0,39,506	0/0:22,0:22:63.20:0,63,816	0/0:17,0:17:45.13:0,45,561	0/0:15,0:15:42.14:0,42,545	0/0:13,0:13:39.11:0,39,492	0/0:31,0:31:90.28:0,90,1151	1/1:0,33:33:99:1431,99,0	0/0:22,0:22:63.17:0,63,780	0/0:12,0:12:19.50:0,19,220	0/0:7,0:7:10.70:0,11,45	0/0:22,0:22:63.20:0,63,817	0/0:19,0:19:54.17:0,54,699	0/0:27,0:27:81.24:0,81,1019	0/0:26,0:26:72.23:0,72,934	0/0:17,0:17:24.09:0,24,158	0/0:34,0:34:99:0,102,1281	0/0:33,0:33:87.22:0,87,1064	0/0:14,0:14:39.13:0,39,505	0/0:13,0:13:33.11:0,33,425	0/0:36,0:36:99:0,105,1331	0/0:17,0:17:51.17:0,51,659	0/0:15,0:15:45.15:0,45,580	0/0:34,0:34:99:0,102,1322	0/0:19,0:19:54.16:0,54,683	0/0:21,0:21:63.07:0,63,793	0/0:20,0:19:60.18:0,60,758	0/0:12,0:12:36.12:0,36,459
chr10	65847945	.	A	AC	761.53	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-4.797;DP=606;FS=1.607;HRun=6;HaplotypeScore=69.2706;InbreedingCoeff=0.9873;MQ=85.83;MQ0=0;MQRankSum=-2.135;QD=19.04;ReadPosRankSum=0.797;VQSLOD=3.3226;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:75.15:0,75,764	0/0:13,0:13:36.08:0,36,367	0/0:23,0:23:51.11:0,51,514	0/0:18,0:18:35.91:0,36,328	0/0:15,0:15:39.07:0,39,391	0/0:14,0:14:36.08:0,36,367	0/0:30,0:30:84.17:0,84,849	0/0:33,0:33:51.47:0,51,247	0/0:21,0:21:54.12:0,54,550	1/1:6,10:16:27.09:335,27,0	1/1:0,7:7:12.04:151,12,0	0/0:23,0:23:57.10:0,57,574	0/0:18,0:18:54.12:0,54,550	0/0:27,0:27:75.16:0,75,764	0/0:25,0:25:72.16:0,72,734	1/1:1,16:17:33.11:415,33,0	0/0:34,0:34:61.08:0,61,875	0/0:30,0:30:41.17:0,41,107	0/0:15,0:15:30.04:0,30,299	0/0:14,0:14:36.07:0,36,360	0/0:39,0:39:99:0,105,1063	0/0:17,0:17:45.10:0,45,458	0/0:16,0:16:42.09:0,42,427	0/0:34,0:34:90.20:0,90,918	0/0:18,0:18:48.11:0,48,489	0/0:21,1:22:25.41:0,25,574	0/0:21,0:20:54.07:0,54,531	0/0:13,0:13:30.04:0,30,298
chr10	65847951	.	CG	C	979.93	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.653;DP=601;FS=0.000;HRun=1;HaplotypeScore=66.2357;InbreedingCoeff=0.9675;MQ=86.65;MQ0=0;MQRankSum=-3.678;QD=30.62;ReadPosRankSum=0.609;VQSLOD=3.2338;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:90.24:0,90,1299	0/0:12,0:12:36.12:0,36,550	0/0:21,0:21:52.94:0,53,725	0/0:21,0:21:38.80:0,39,484	0/0:14,0:14:39.12:0,39,573	0/0:13,0:13:39.13:0,39,594	0/0:32,0:32:96.16:0,96,1347	0/0:29,0:29:87.18:0,87,1202	0/0:22,0:22:62.98:0,63,867	0/0:16,0:16:47.52:0,48,385	0/0:6,0:6:11.90:0,12,84	0/0:21,0:21:63.17:0,63,933	0/0:19,0:19:57.14:0,57,831	0/0:29,0:29:84.21:0,84,1215	0/0:26,0:26:76.09:0,76,1120	0/0:20,0:20:47.50:0,48,333	0/0:31,0:32:96.17:0,96,1413	1/1:0,32:32:78.26:1075,78,0	0/0:12,0:12:36.04:0,36,517	0/0:15,0:15:39.09:0,39,569	0/0:39,0:39:99:0,117,1723	0/0:17,0:17:26.25:0,26,680	0/0:16,0:16:45.14:0,45,664	0/0:32,0:32:96.27:0,96,1418	0/0:18,0:18:51.14:0,51,742	0/0:24,0:24:72.12:0,72,1016	0/0:20,0:19:60.17:0,60,866	0/0:11,0:11:33.11:0,33,498
chr10	65848340	.	TGTCTATGCAAAGCCCACTCTA	T	4721.92	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.152;DP=664;FS=5.722;HRun=0;HaplotypeScore=376.8963;InbreedingCoeff=0.9960;MQ=75.47;MQ0=0;MQRankSum=-6.462;QD=85.85;ReadPosRankSum=0.722;VQSLOD=3.3223;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,135,12511	0/0:10,0:10:30.10:0,30,2620	0/0:11,0:11:26.95:0,27,949	0/0:14,0:14:42.14:0,42,1607	0/0:41,0:41:99:0,117,9959	0/0:23,0:23:69.24:0,69,6513	0/0:36,0:36:99:0,105,9637	1/1:10,10:20:30.09:1091,30,0	1/1:3,17:20:45.15:2654,45,0	0/0:29,0:29:81.27:0,81,7250	0/0:20,0:20:51.18:0,51,4379	0/0:27,0:27:81.28:0,81,7848	0/0:18,0:18:54.19:0,54,5051	0/0:21,0:21:60.21:0,60,5638	0/0:38,0:38:99:0,114,10378	0/0:31,0:31:90.31:0,90,8429	0/0:23,0:23:69.24:0,69,6275	1/1:6,9:15:18.06:978,18,0	0/0:17,0:17:51.18:0,51,3183	0/0:23,0:23:69.24:0,69,6177	0/0:26,0:26:78.22:0,78,6541	0/0:28,0:28:84.29:0,84,7703	0/0:15,0:15:45.15:0,45,3908	0/0:21,0:21:63.22:0,63,5539	0/0:22,0:22:66.23:0,66,5798	0/0:24,0:24:72.25:0,72,6035	0/0:36,0:36:99:0,105,9047	0/0:9,0:9:27.09:0,27,1803
chr10	65848685	.	A	ATG	1026.26	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-3.872;DP=986;FS=2.511;HRun=0;HaplotypeScore=135.7473;InbreedingCoeff=0.9992;MQ=61.50;MQ0=8;MQRankSum=-0.803;QD=20.53;ReadPosRankSum=1.828;VQSLOD=4.1353;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:96.26:0,96,1167	0/0:13,0:13:33.11:0,33,412	0/0:53,0:31:54:0,54,599	0/0:52,0:34:35.80:0,36,473	0/0:23,0:24:63.03:0,63,763	0/0:20,0:20:42.13:0,42,524	0/0:30,0:31:77.59:0,78,929	0/0:42,0:42:81.23:0,81,977	0/0:34,0:33:69.04:0,69,848	0/0:37,0:37:84.23:0,84,1006	0/0:16,0:16:33:0,33,412	0/0:47,0:48:99:0,117,1421	0/0:44,0:44:99:0,117,1443	0/0:26,0:26:63.18:0,63,773	0/0:47,0:46:99:0,120,1499	0/0:32,0:32:78.25:0,78,975	0/0:38,0:38:99:0,105,1263	1/1:13,37:50:41.72:1121,42,0	0/0:29,0:28:48.13:0,48,599	0/0:31,0:32:90.11:0,90,1087	0/0:66,0:65:99:0,153,1880	0/0:22,0:23:66.04:0,66,796	0/0:16,0:16:42.12:0,42,510	0/0:47,0:47:97.58:0,98,1284	0/0:25,0:25:51.13:0,51,610	0/0:34,0:35:95.80:0,96,1135	0/0:34,0:33:91.83:0,92,1114	0/0:27,0:27:75.24:0,75,935
chr10	65850759	.	T	TG	959.85	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.488;DP=630;FS=4.045;HRun=0;HaplotypeScore=67.6889;InbreedingCoeff=0.9951;MQ=85.67;MQ0=1;MQRankSum=-3.340;QD=43.63;ReadPosRankSum=3.456;VQSLOD=4.2745;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:38:99:0,117,1615	0/0:7,0:7:21.07:0,21,293	0/0:26,0:26:72.18:0,72,945	0/0:25,0:25:37.37:0,37,844	0/0:21,0:21:63.21:0,63,881	0/0:18,0:18:54.18:0,54,754	0/0:29,0:29:87.28:0,87,1198	0/0:29,0:29:84.28:0,84,1174	1/1:0,22:22:66.23:1055,66,0	0/0:18,0:18:54.18:0,54,755	0/0:12,0:12:36.12:0,36,503	0/0:22,0:22:63.21:0,63,880	0/0:25,0:25:75.24:0,75,1030	0/0:14,0:14:39.13:0,39,543	0/0:39,0:39:99:0,117,1636	0/0:30,0:30:87.27:0,87,1198	0/0:39,0:39:99:0,117,1616	0/0:16,0:16:42.14:0,42,586	0/0:22,0:22:63.21:0,63,881	0/0:14,0:14:42.14:0,42,587	0/0:34,0:33:99:0,99,1365	0/0:16,0:16:48.16:0,48,659	0/0:17,0:17:51.13:0,51,691	0/0:24,0:23:72.23:0,72,989	0/0:14,0:14:42.14:0,42,587	0/0:21,0:21:57.17:0,57,779	0/0:27,0:27:81.26:0,81,1113	0/0:10,0:10:30.10:0,30,420
chr10	65851157	.	G	GA	985.10	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.742;DP=585;FS=20.845;HRun=2;HaplotypeScore=68.2901;InbreedingCoeff=0.9097;MQ=98.36;MQ0=0;MQRankSum=-3.629;QD=36.49;ReadPosRankSum=1.478;VQSLOD=1.7800;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,126,1547	0/0:4,0:4:12.04:0,12,149	0/0:32,0:32:84.22:0,84,1014	0/0:29,0:29:81.18:0,81,958	0/0:15,0:15:42.12:0,42,508	0/0:15,0:15:42.12:0,42,508	0/0:21,0:21:63.19:0,63,769	0/0:21,0:21:60.18:0,60,733	1/1:1,26:27:75.25:1080,75,0	0/0:18,0:18:48.15:0,48,595	0/0:12,0:12:33.10:0,33,405	0/0:24,0:24:69.22:0,69,855	0/0:20,0:20:57.16:0,57,692	0/0:11,0:11:33.10:0,33,409	0/0:20,0:20:60.19:0,60,744	0/0:18,0:18:51.16:0,51,632	0/0:37,0:37:99:0,108,1325	0/0:27,0:27:81.25:0,81,1000	0/0:10,0:10:30.09:0,30,372	0/0:7,0:7:21.05:0,21,248	0/0:60,0:60:99:0,172,2107	0/0:11,0:11:27.07:0,27,321	0/0:8,0:8:21.07:0,21,260	0/0:28,0:28:81.25:0,81,1002	0/0:14,0:14:39.12:0,39,484	0/0:26,0:26:75.23:0,75,919	0/0:17,0:16:51.16:0,51,632	0/0:7,0:7:9.01:0,9,99
chr10	65854041	.	A	AGTGTGT	2792.88	PASS	AB=0.931;AC=36;AF=0.750;AN=48;BaseQRankSum=-1.838;DP=568;FS=1.210;HRun=0;HaplotypeScore=154.7238;InbreedingCoeff=0.4470;MQ=63.08;MQ0=8;MQRankSum=-0.855;QD=7.07;ReadPosRankSum=-0.177;VQSLOD=2.2734;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:2.90:0,3,48	1/1:10,0:10:0.47:1,0,0	./.	./.	0/0:18,0:18:0.47:0,0,1	1/1:11,4:19:2.87:87,3,0	1/1:24,5:29:2.73:95,3,0	0/1:18,0:18:0:0,0,0	1/1:13,0:13:5.98:62,6,0	1/1:29,0:29:21.04:380,21,0	1/1:20,0:20:5.94:138,6,0	0/1:26,0:31:17.11:147,0,17	0/0:17,0:18:5.99:0,6,97	1/1:16,0:15:11.34:268,11,0	1/1:17,2:20:2.67:95,3,0	1/1:25,0:25:9:99,9,0	1/1:17,0:17:8.86:167,9,0	1/1:19,0:18:17.65:212,18,0	1/1:13,0:13:6.02:135,6,0	1/1:20,0:19:9.03:168,9,0	1/1:28,0:27:6.49:117,6,0	./.	0/0:18,0:18:3.01:0,3,41	0/0:23,0:23:24.05:0,24,436	1/1:18,0:18:12.03:208,12,0	1/1:24,0:23:18.53:408,19,0	1/1:21,1:23:6.02:138,6,0	./.
chr10	65854084	.	G	GAA	274.02	PASS	AB=0.938;AC=3;AF=0.054;AN=56;BaseQRankSum=5.413;DP=506;FS=12.233;HRun=0;HaplotypeScore=111.7987;InbreedingCoeff=0.5048;MQ=54.03;MQ0=20;MQRankSum=-4.662;QD=10.15;ReadPosRankSum=-1.897;VQSLOD=2.5164;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:54.16:0,54,786	0/0:13,0:12:17.98:0,18,238	0/0:21,0:14:42.14:0,42,639	0/0:25,0:20:54.08:0,54,801	0/0:22,0:22:24.08:0,24,348	0/0:17,0:17:18.95:0,19,275	0/0:29,0:29:51.31:0,51,707	0/0:19,0:18:51.11:0,51,711	1/1:9,3:12:5.64:246,6,0	0/0:14,0:13:36.09:0,36,465	0/0:15,0:14:23.80:0,24,309	0/0:22,0:22:29.17:0,29,376	0/0:11,0:10:24.07:0,24,348	0/0:17,0:16:28.58:0,29,316	0/0:15,0:14:17.28:0,17,224	0/0:22,0:21:36.05:0,36,468	0/0:12,0:12:16.72:0,17,260	0/1:14,1:14:70.36:123,0,70	0/0:13,0:12:36.10:0,36,511	0/0:11,0:11:20.94:0,21,208	0/0:22,0:20:30.05:0,30,391	0/0:26,0:24:18.04:0,18,231	0/0:20,0:20:24.07:0,24,331	0/0:31,0:31:87.06:0,87,1294	0/0:13,0:13:12.48:0,12,127	0/0:19,0:18:47.71:0,48,614	0/0:13,0:12:29.58:0,30,365	0/0:8,0:8:21.01:0,21,236
chr10	65854123	.	T	TGAGTTG	1626.45	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=2.485;DP=533;FS=23.544;HRun=0;HaplotypeScore=131.5395;InbreedingCoeff=0.9925;MQ=74.44;MQ0=0;MQRankSum=-7.089;QD=62.56;ReadPosRankSum=-0.626;VQSLOD=2.1271;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:90.31:0,90,2057	0/0:10,0:10:30.10:0,30,691	0/0:29,0:29:75.26:0,75,1678	0/0:32,0:31:78.22:0,78,1647	0/0:16,0:16:39.13:0,39,899	0/0:18,0:18:39.13:0,39,857	0/0:28,0:28:78.27:0,78,1721	0/0:31,0:31:87.27:0,87,1920	1/1:1,12:13:36.12:1241,36,0	0/0:17,0:17:45.14:0,45,938	0/0:21,0:21:60.21:0,60,1366	0/0:15,0:15:45.15:0,45,1038	0/0:21,0:21:60.21:0,60,1380	0/0:16,0:16:45.05:0,45,921	0/0:15,0:15:39.13:0,39,881	0/0:25,0:25:66.23:0,66,1520	0/0:17,0:17:51.18:0,51,1157	1/1:5,5:13:21:506,21,0	0/0:18,0:18:48.16:0,48,1061	0/0:8,0:8:21.07:0,21,483	0/0:23,0:22:48.16:0,48,1063	0/0:19,0:19:51.18:0,51,1175	0/0:16,0:16:42.14:0,42,968	0/0:31,0:30:81.27:0,81,1824	0/0:11,0:11:30.06:0,30,642	0/0:20,0:20:57.20:0,57,1313	0/0:11,0:11:27.09:0,27,622	0/0:7,0:7:21.07:0,21,484
chr10	65854253	.	AGT	A	194.48	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.076;DP=754;FS=1.140;HRun=0;HaplotypeScore=113.4051;InbreedingCoeff=0.9696;MQ=58.45;MQ0=11;MQRankSum=-2.803;QD=6.27;ReadPosRankSum=-1.059;VQSLOD=2.9289;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,108,1765	0/0:11,0:11:33.10:0,33,543	0/0:47,0:19:46.32:0,46,651	0/0:63,0:31:30.76:0,31,714	0/0:14,0:14:41.69:0,42,593	0/0:21,0:21:48.02:0,48,762	0/0:31,0:31:78.27:0,78,1308	0/0:39,0:39:96.21:0,96,1487	1/1:5,7:12:12.04:156,12,0	0/0:26,0:26:70.29:0,70,1054	0/0:13,0:13:18.06:0,18,301	0/0:31,0:31:80.29:0,80,1307	0/0:12,0:12:36.05:0,36,531	0/0:23,0:23:60.20:0,60,1009	0/0:31,0:30:75.23:0,75,1239	0/0:21,0:21:27.72:0,28,386	0/0:25,0:24:69.24:0,69,1177	1/1:4,15:18:14.67:151,15,0	0/0:28,0:26:65.95:0,66,1024	0/0:17,0:17:50.85:0,51,717	0/0:70,0:69:99:0,171,2661	0/0:23,0:23:60.15:0,60,992	0/0:16,0:16:39.10:0,39,619	0/0:39,0:39:99:0,105,1709	0/0:20,0:19:45.15:0,45,765	0/0:23,0:22:57.19:0,57,953	0/0:22,0:22:60.20:0,60,1018	0/0:14,0:14:42.11:0,42,646
chr10	65854301	.	T	TGTGTGA	789.01	PASS	AB=0.926;AC=4;AF=0.071;AN=56;BaseQRankSum=2.559;DP=788;FS=6.910;HRun=0;HaplotypeScore=179.7577;InbreedingCoeff=-0.0846;MQ=55.21;MQ0=22;MQRankSum=-5.469;QD=6.36;ReadPosRankSum=-1.426;VQSLOD=1.6233;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:43:93.01:0,93,1708	0/0:12,0:12:36.03:0,36,564	0/0:37,0:6:12.04:0,12,173	0/0:46,0:11:18.25:0,18,232	0/0:28,0:28:21.26:0,21,885	0/0:23,0:23:24.01:0,24,837	0/0:32,0:32:42.01:0,42,1062	0/1:44,0:42:99:198,0,654	0/0:13,0:13:6.26:0,6,86	0/1:18,13:29:99:492,0,284	0/0:20,0:20:10.54:0,11,191	0/0:29,0:29:32.51:0,33,1067	0/0:20,0:20:60.16:0,60,1117	0/0:24,0:24:62.89:0,63,1102	0/0:27,0:27:66.18:0,66,1271	0/1:30,0:30:99:178,0,122	0/0:32,0:32:80.25:0,80,1459	0/1:19,0:18:30.28:30,0,207	0/0:14,0:12:25.35:0,25,469	0/0:27,0:27:54.25:0,54,1257	0/0:79,0:76:99:0,121,3314	0/0:35,0:34:26.79:0,27,1456	0/0:19,0:19:50.89:0,51,866	0/0:38,0:38:99:0,102,1809	0/0:17,0:17:36.06:0,36,624	0/0:18,0:18:42.10:0,42,720	0/0:19,0:19:51.10:0,51,848	0/0:10,0:9:23.98:0,24,371
chr10	65855290	.	T	TA	2097.63	PASS	AB=0.523;AC=5;AF=0.089;AN=56;BaseQRankSum=-8.833;DP=609;FS=11.201;HRun=1;HaplotypeScore=59.4618;InbreedingCoeff=0.7944;MQ=81.43;MQ0=0;MQRankSum=-0.300;QD=36.80;ReadPosRankSum=0.035;VQSLOD=2.9354;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,163,2101	0/0:10,0:10:30.10:0,30,389	0/0:16,0:16:48.15:0,48,609	0/0:17,0:17:41.85:0,42,492	0/0:15,0:15:45.15:0,45,584	0/0:18,0:18:54.14:0,54,671	0/0:20,0:20:54.14:0,54,670	0/0:24,0:24:66.21:0,66,855	0/0:20,0:20:60.20:0,60,779	1/1:0,24:24:72.24:1079,72,0	1/1:1,9:10:21.07:315,21,0	0/0:24,0:24:72.23:0,72,933	0/0:23,0:23:69.22:0,69,896	0/0:20,0:20:60.20:0,60,779	0/0:24,0:24:69.22:0,69,895	0/1:2,21:23:11.69:833,0,12	0/0:30,0:30:87.28:0,87,1127	0/0:26,0:26:78.25:0,78,1012	0/0:19,0:19:51.14:0,51,645	0/0:17,0:17:51.17:0,51,661	0/0:25,0:25:72.23:0,72,935	0/0:24,0:24:72.23:0,72,934	0/0:23,0:23:66.21:0,66,857	0/0:22,0:22:66.21:0,66,857	0/0:22,0:22:66.21:0,66,856	0/0:23,0:23:69.22:0,69,896	0/0:22,0:22:66.21:0,66,856	0/0:13,0:13:39.13:0,39,504
chr10	65857152	.	A	ATGTGTG	1776.42	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=0.174;DP=707;FS=0.720;HRun=0;HaplotypeScore=191.0168;InbreedingCoeff=0.9994;MQ=65.11;MQ0=2;MQRankSum=-4.546;QD=45.55;ReadPosRankSum=1.264;VQSLOD=3.7462;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,135,2919	0/0:15,0:15:33.96:0,34,407	0/0:27,0:22:59.40:0,59,1189	0/0:14,0:11:29.91:0,30,424	0/0:19,0:19:54.17:0,54,1234	0/0:25,0:25:66.14:0,66,739	0/0:30,0:30:72.10:0,72,764	0/0:35,0:35:99:0,102,1256	1/1:2,18:23:39.13:1255,39,0	0/0:28,0:28:80.43:0,80,1004	0/0:17,0:17:38.83:0,39,496	0/0:28,0:28:72.90:0,73,877	0/0:19,0:19:54.15:0,54,1205	0/0:29,0:29:75.18:0,75,874	0/0:30,0:30:81.23:0,81,944	0/0:27,0:27:66.14:0,66,777	0/0:47,0:47:99:0,117,1293	1/1:0,0:16:39.05:643,39,0	0/0:32,0:32:93.03:0,93,1073	0/0:22,0:22:41.98:0,42,468	0/0:30,0:30:63.18:0,63,861	0/0:18,0:18:38.58:0,39,435	0/0:19,0:19:51.14:0,51,1049	0/0:19,0:19:54.15:0,54,1170	0/0:15,0:15:39.09:0,39,512	0/0:32,0:32:96.21:0,96,1232	0/0:26,0:26:69.17:0,69,806	0/0:16,0:16:39.07:0,39,414
chr10	65857154	.	A	ATG	15088.68	PASS	AB=0.590;AC=35;AF=0.625;AN=56;BaseQRankSum=-11.703;DP=734;FS=22.395;HRun=0;HaplotypeScore=92.5308;InbreedingCoeff=0.4795;MQ=65.10;MQ0=2;MQRankSum=-0.726;QD=26.85;ReadPosRankSum=4.567;VQSLOD=4.0747;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,122,1399	1/1:5,11:16:30.10:481,30,0	0/0:27,0:22:30.23:0,30,495	0/0:15,0:14:12.15:0,12,214	0/0:20,0:20:51.15:0,51,617	1/1:7,18:25:48.16:787,48,0	1/1:8,24:33:57.19:931,57,0	1/1:18,18:36:51.16:804,51,0	1/1:26,0:26:50.92:436,51,0	1/1:6,22:28:32.49:990,32,0	0/1:6,11:17:4.45:457,0,4	0/1:7,21:28:14.09:818,0,14	0/0:20,0:20:54.12:0,54,629	1/1:6,23:29:53.19:929,53,0	1/1:5,29:34:72.11:1167,72,0	1/1:7,20:27:7.95:651,8,0	1/1:15,33:49:75.26:1224,75,0	1/1:16,0:16:39.01:366,39,0	0/1:11,20:32:26.65:870,0,27	0/1:5,17:22:1.08:475,0,1	0/1:7,25:33:48.65:638,0,49	1/1:6,14:21:3.23:335,3,0	0/0:18,0:18:39.09:0,39,457	0/0:19,0:20:47.93:0,48,542	0/1:8,8:18:36.51:317,0,37	0/1:9,23:32:30.28:1038,0,30	1/1:4,20:24:19.99:833,20,0	1/1:2,14:16:33.11:541,33,0
chr10	65857414	.	G	GT	257.49	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=4.034;DP=599;FS=10.027;HRun=0;HaplotypeScore=79.0359;InbreedingCoeff=0.8190;MQ=73.25;MQ0=1;MQRankSum=-1.184;QD=7.80;ReadPosRankSum=1.779;VQSLOD=3.0256;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,117,1480	0/0:8,0:8:24.08:0,24,335	0/0:17,0:15:25.47:0,25,339	0/0:19,0:17:43.75:0,44,482	0/0:34,0:34:93.15:0,93,1186	0/0:14,0:14:42.04:0,42,542	0/0:30,0:30:84.16:0,84,1081	0/0:22,0:22:62.73:0,63,552	1/1:8,0:8:0.43:38,0,0	0/0:31,0:31:86.72:0,87,916	0/0:18,0:18:36.57:0,37,452	0/0:22,0:22:60.01:0,60,740	0/0:12,0:12:23.64:0,24,382	0/0:15,0:15:42.14:0,42,583	0/0:31,0:31:90.23:0,90,1193	0/0:25,0:25:59.43:0,59,476	0/0:34,0:34:98.86:0,99,1286	1/1:6,17:25:9.81:318,10,0	0/0:27,0:27:73.45:0,73,950	0/0:15,0:15:44.36:0,44,530	0/0:22,0:22:66.22:0,66,910	0/0:19,0:19:54.10:0,54,670	0/0:20,0:20:57.17:0,57,761	0/0:20,0:20:60.20:0,60,828	0/0:15,0:15:45.10:0,45,571	0/0:27,0:27:81.13:0,81,1015	0/0:19,0:19:51.05:0,51,620	0/0:9,0:9:24.02:0,24,294
chr10	65857415	.	G	GT	2153.91	PASS	AB=0.873;AC=20;AF=0.357;AN=56;BaseQRankSum=-3.546;DP=612;FS=8.932;HRun=12;HaplotypeScore=77.2789;InbreedingCoeff=0.2237;MQ=73.16;MQ0=1;MQRankSum=0.004;QD=7.23;ReadPosRankSum=-2.124;VQSLOD=1.5667;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:40,2:42:56.08:0,56,553	0/0:8,0:8:20.87:0,21,153	0/1:14,0:15:2.11:2,0,68	0/1:19,0:18:10.72:11,0,59	0/0:33,1:36:9.28:0,9,321	0/0:12,1:14:35.06:0,35,260	0/0:26,0:29:49.31:0,49,457	1/1:7,16:23:29.18:445,29,0	1/1:12,0:12:18.40:99,18,0	1/1:11,19:31:37.73:465,38,0	0/1:6,10:18:39.91:263,0,40	0/1:15,3:22:19.69:20,0,164	0/0:12,0:13:0.09:0,0,147	0/0:14,0:15:31.79:0,32,223	0/0:28,2:31:12.12:0,12,396	1/1:4,20:25:50.82:468,51,0	0/0:33,3:36:15.85:0,16,441	1/1:25,0:25:41.93:433,42,0	0/0:22,0:28:39.26:0,39,269	0/1:14,3:17:28.23:28,0,143	0/0:21,0:22:40.75:0,41,290	0/1:16,3:19:13.73:14,0,231	0/0:20,0:20:47.63:0,48,345	0/0:19,0:20:43.76:0,44,311	0/1:12,2:15:26.62:27,0,141	0/1:23,2:27:29.45:29,0,242	0/1:15,3:18:28.61:29,0,143	0/1:8,1:9:5.36:5,0,126
chr10	65861172	.	TG	T	551.55	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.938;DP=652;FS=0.000;HRun=5;HaplotypeScore=75.3310;InbreedingCoeff=0.9951;MQ=76.93;MQ0=0;MQRankSum=1.284;QD=22.06;ReadPosRankSum=2.863;VQSLOD=2.6918;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,132,1728	0/0:9,0:9:27.09:0,27,369	0/0:19,0:19:44.63:0,45,573	0/0:15,0:15:30.09:0,30,391	0/0:21,0:21:60.15:0,60,786	0/0:12,0:12:33.10:0,33,436	0/0:22,0:22:60.19:0,60,803	0/0:35,0:35:84.27:0,84,1134	0/0:24,0:24:69.16:0,69,903	0/0:26,0:26:72.23:0,72,971	0/0:12,0:12:24.08:0,24,327	0/0:23,0:23:54.18:0,54,738	0/0:20,0:20:51.17:0,51,687	0/0:23,0:23:66.22:0,66,894	0/0:31,0:31:90.25:0,90,1193	0/0:24,0:24:60.19:0,60,804	0/0:37,0:37:99:0,108,1445	1/1:2,23:25:57.16:646,57,0	0/0:28,0:28:75.25:0,75,1025	0/0:14,0:14:42.13:0,42,558	0/0:50,0:50:99:0,135,1812	0/0:16,0:16:42.10:0,42,550	0/0:16,0:16:48.16:0,48,655	0/0:25,0:25:63.19:0,63,844	0/0:21,0:21:57.19:0,57,779	0/0:17,0:17:48.14:0,48,638	0/0:24,0:24:66.21:0,66,886	0/0:10,0:10:27.09:0,27,369
chr10	65861197	.	A	ACTTGCTTTAGCTATCATTACCT	5529.81	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-0.030;DP=505;FS=0.000;HRun=0;HaplotypeScore=275.6710;InbreedingCoeff=0.8890;MQ=81.09;MQ0=0;MQRankSum=-7.365;QD=251.35;ReadPosRankSum=3.669;VQSLOD=4.3791;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:84.27:0,84,4361	0/0:12,0:12:33.11:0,33,1735	0/0:15,0:15:39.13:0,39,1580	0/0:17,0:16:41.40:0,41,1372	0/0:11,0:11:30.10:0,30,1600	0/0:7,0:7:21.07:0,21,1029	0/0:25,0:25:75.26:0,75,4273	0/0:31,0:31:84.27:0,84,3873	1/1:12,8:22:57.20:5530,57,0	0/0:14,0:14:36.12:0,36,1793	0/0:7,0:7:15.05:0,15,694	0/0:17,0:17:42.14:0,42,2282	0/0:15,0:15:39.13:0,39,2305	0/0:23,0:23:69.24:0,69,3795	0/0:34,0:34:99:0,99,5543	0/0:20,0:20:54.19:0,54,2914	0/0:37,0:37:99:0,108,6042	0/0:24,0:24:54.19:0,54,2816	0/0:20,0:20:54.19:0,54,2439	0/0:5,0:5:9.03:0,9,436	0/0:34,0:34:93.30:0,93,5169	0/0:10,0:10:24.08:0,24,1213	0/0:6,0:6:18.06:0,18,972	0/0:26,0:26:72.25:0,72,4129	0/0:10,0:10:30.10:0,30,1571	0/0:11,0:11:21.07:0,21,1233	0/0:18,0:18:45.15:0,45,2540	0/0:4,0:4:12.01:0,12,540
chr10	65862528	.	A	AGAGAACTCGG	5532.15	PASS	AB=0.971;AC=5;AF=0.089;AN=56;BaseQRankSum=-4.849;DP=484;FS=10.270;HRun=0;HaplotypeScore=145.7694;InbreedingCoeff=0.7286;MQ=86.58;MQ0=0;MQRankSum=-10.213;QD=68.30;ReadPosRankSum=2.545;VQSLOD=4.5276;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:42.14:0,42,1361	0/0:6,0:6:18.06:0,18,551	0/0:12,0:12:33.10:0,33,874	0/0:23,0:23:60.20:0,60,1789	0/0:6,0:6:18.05:0,18,477	0/0:14,0:14:39.13:0,39,1251	0/0:31,0:31:87.25:0,87,2524	0/0:24,0:24:60.19:0,60,1728	1/1:8,9:21:45.11:2036,45,0	0/0:10,0:10:21.07:0,21,690	0/0:2,0:2:6.02:0,6,152	0/0:19,0:19:54.19:0,54,1747	0/0:25,0:25:69.22:0,69,2167	0/0:22,0:22:60.19:0,60,1890	0/0:33,0:33:93.31:0,93,2962	0/0:19,0:19:57.14:0,57,1750	0/1:32,1:33:61.86:62,0,2768	1/1:9,15:27:69.24:3434,69,0	0/0:12,0:12:33.10:0,33,938	0/0:6,0:5:15.05:0,15,490	0/0:29,0:29:75.26:0,75,2460	0/0:16,0:16:27.54:0,28,739	0/0:6,0:6:18.03:0,18,446	0/0:29,0:29:81.28:0,81,2636	0/0:7,0:7:21.07:0,21,690	0/0:14,0:14:36.11:0,36,1099	0/0:16,0:16:45.13:0,45,1377	0/0:7,0:7:21.07:0,21,606
chr10	65863161	.	C	CTCCCG	2127.14	PASS	AB=0.564;AC=5;AF=0.089;AN=56;BaseQRankSum=4.515;DP=808;FS=0.639;HRun=0;HaplotypeScore=156.0597;InbreedingCoeff=0.7898;MQ=75.23;MQ0=1;MQRankSum=-7.307;QD=36.67;ReadPosRankSum=0.673;VQSLOD=3.6874;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,105,1778	0/0:15,0:15:30.09:0,30,547	0/0:32,0:26:41.69:0,42,811	0/0:31,0:27:49.02:0,49,861	0/0:27,0:27:66.23:0,66,1278	0/0:22,0:22:51.17:0,51,987	0/0:37,0:37:93.25:0,93,1655	0/0:30,0:29:33.10:0,33,437	0/0:29,0:29:60.25:0,60,1016	1/1:9,11:21:47.23:1014,47,0	1/1:4,11:15:12.04:320,12,0	0/0:28,0:28:72.21:0,72,1288	0/0:28,0:28:78.25:0,78,1467	0/0:16,0:16:39.11:0,39,721	0/0:35,0:35:93.29:0,93,1736	0/1:5,16:22:8.59:918,0,9	0/0:42,0:42:99:0,111,1993	0/0:31,0:31:66.25:0,66,1082	0/0:26,0:26:48.11:0,48,771	0/0:20,0:20:39.13:0,39,755	0/0:83,0:83:99:0,205,3767	0/0:25,0:24:66.21:0,66,1245	0/0:24,0:24:57.17:0,57,1071	0/0:43,0:43:99:0,117,2217	0/0:23,0:23:57.12:0,57,929	0/0:29,0:29:72.23:0,72,1308	0/0:26,0:26:72.25:0,72,1394	0/0:7,0:7:14.37:0,14,172
chr10	65865904	.	AG	A	180.53	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.393;DP=483;FS=0.000;HRun=2;HaplotypeScore=50.0383;InbreedingCoeff=0.9807;MQ=93.61;MQ0=0;MQRankSum=-1.572;QD=18.05;ReadPosRankSum=0.738;VQSLOD=3.5468;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,138,2007	0/0:8,0:8:24.06:0,24,338	0/0:19,0:19:57.11:0,57,777	0/0:26,0:26:38.68:0,39,875	0/0:7,0:6:21.07:0,21,314	0/0:11,0:11:33.11:0,33,495	0/0:23,0:23:69.22:0,69,1008	0/0:35,0:35:99:0,102,1473	1/1:0,10:10:21.07:273,21,0	0/0:17,0:17:45.15:0,45,663	0/0:11,0:11:33.11:0,33,494	0/0:21,0:21:63.21:0,63,940	0/0:13,0:13:39.11:0,39,564	0/0:20,0:20:57.19:0,57,848	0/0:13,0:13:36.11:0,36,519	0/0:22,0:22:66.22:0,66,988	0/0:23,0:23:66.22:0,66,989	0/0:16,0:16:48.16:0,48,719	0/0:15,0:15:42.14:0,42,630	0/0:8,0:8:24.08:0,24,360	0/0:28,0:28:84.28:0,84,1257	0/0:10,0:10:30.10:0,30,445	0/0:14,0:14:42.14:0,42,629	0/0:27,0:27:81.23:0,81,1187	0/0:9,0:9:27.09:0,27,405	0/0:14,0:14:42.14:0,42,629	0/0:10,0:10:27.09:0,27,403	0/0:7,0:7:21.07:0,21,315
chr10	65866136	.	TG	T	1038.71	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.118;DP=497;FS=1.445;HRun=6;HaplotypeScore=51.9769;InbreedingCoeff=0.9370;MQ=94.20;MQ0=0;MQRankSum=-1.490;QD=26.63;ReadPosRankSum=3.241;VQSLOD=3.8702;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:84.26:0,84,1089	0/0:10,0:10:24.08:0,24,311	0/0:23,0:23:45.07:0,45,513	0/0:22,0:22:51.16:0,51,643	0/0:7,0:7:21.06:0,21,261	0/0:13,0:13:33.11:0,33,434	0/0:6,0:6:18.06:0,18,237	0/0:23,0:23:48.14:0,48,617	1/1:1,14:15:45.11:483,45,0	0/0:18,0:18:45.13:0,45,569	0/0:3,0:3:9.03:0,9,117	0/0:29,0:29:78.22:0,78,984	0/0:15,0:15:42.12:0,42,537	0/0:25,0:25:72.21:0,72,918	0/0:24,0:24:69.20:0,69,880	0/0:14,1:15:12.90:0,13,520	0/0:20,0:20:57.19:0,57,750	1/1:2,22:24:63.16:677,63,0	0/0:18,0:18:48.15:0,48,618	0/0:16,0:16:39.13:0,39,513	0/0:32,0:32:90.27:0,90,1153	0/0:16,0:16:39.13:0,39,509	0/0:19,0:19:48.12:0,48,599	0/0:18,0:18:48.16:0,48,632	0/0:13,0:13:36.10:0,36,448	0/0:24,0:24:63.19:0,63,802	0/0:15,0:15:45.15:0,45,592	0/0:4,0:4:12.03:0,12,143
chr10	65866404	.	T	TACAC	2965.49	PASS	AB=0.757;AC=39;AF=0.813;AN=48;BaseQRankSum=-0.609;DP=557;FS=7.199;HRun=0;HaplotypeScore=108.9885;InbreedingCoeff=0.5699;MQ=68.75;MQ0=6;MQRankSum=0.538;QD=7.70;ReadPosRankSum=-2.519;VQSLOD=1.4256;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:30:21.04:0,21,293	1/1:10,4:15:11.69:221,12,0	./.	./.	./.	1/1:14,0:14:12.02:185,12,0	1/1:22,0:27:2.74:12,3,0	1/1:19,0:19:0.47:1,0,0	1/1:16,0:16:12.50:191,12,0	1/1:26,0:25:18.91:207,19,0	./.	1/1:15,0:15:18.01:207,18,0	0/0:19,0:19:18.05:0,18,272	1/1:15,0:15:9.01:131,9,0	1/1:16,3:22:2.84:67,3,0	1/1:18,0:17:15.03:226,15,0	0/1:19,5:28:10.90:66,0,11	1/1:21,1:22:10.55:230,11,0	1/1:14,0:14:6.02:102,6,0	1/1:14,0:14:12.15:185,12,0	1/1:33,0:33:21.06:302,21,0	1/1:28,0:28:15.04:203,15,0	0/0:14,0:16:3:0,3,28	0/0:20,0:21:6:0,6,74	1/1:12,0:17:2.99:24,3,0	1/1:15,0:15:15.51:213,16,0	1/1:19,0:19:9.89:129,10,0	1/1:6,1:6:15.02:210,15,0
chr10	65868993	.	TTTTTTGTTC	T	2107.05	PASS	AB=0.978;AC=23;AF=0.411;AN=56;BaseQRankSum=2.788;DP=556;FS=26.066;HRun=0;HaplotypeScore=127.4272;InbreedingCoeff=-0.4679;MQ=41.74;MQ0=38;MQRankSum=-1.571;QD=5.47;ReadPosRankSum=1.215;VQSLOD=0.8297;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:35:46.19:0,46,1489	1/1:7,0:7:12.02:122,12,0	1/1:25,0:3:0.47:1,0,0	0/0:29,0:6:4.25:0,4,34	0/0:27,0:27:6.65:0,7,614	0/1:11,0:10:41.83:202,0,42	0/1:19,3:19:11.77:291,0,12	0/0:29,0:27:41.03:0,41,971	0/1:20,0:19:9.17:9,0,538	0/1:32,0:30:16.86:17,0,1169	0/1:18,0:17:61.24:61,0,418	0/1:15,0:12:77.02:140,0,77	0/0:8,0:6:17.99:0,18,327	0/1:19,0:19:59.27:59,0,119	0/1:19,0:16:95.41:180,0,95	0/1:11,0:7:36.58:37,0,171	0/1:14,11:25:99:124,0,118	0/0:25,0:17:25.21:0,25,590	0/1:24,0:20:99:158,0,129	0/1:13,0:13:95.40:102,0,95	0/1:13,0:12:46.50:46,0,60	0/1:8,0:8:29.89:30,0,68	0/0:15,0:14:10.05:0,10,487	0/1:27,0:20:47.62:48,0,613	0/1:19,0:19:84.97:85,0,230	0/1:19,0:18:99:190,0,257	0/1:19,0:16:99:283,0,135	0/1:19,0:16:80.84:81,0,120
chr10	65869359	.	ACCT	A	15594.83	PASS	AB=0.538;AC=29;AF=0.518;AN=56;BaseQRankSum=13.529;DP=782;FS=8.373;HRun=0;HaplotypeScore=118.8391;InbreedingCoeff=0.9273;MQ=80.34;MQ0=0;MQRankSum=-4.144;QD=39.38;ReadPosRankSum=5.435;VQSLOD=5.6034;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,132,2966	1/1:0,12:12:30.10:499,30,0	0/0:27,0:27:72.21:0,72,1448	0/0:22,0:22:57.20:0,57,1249	0/0:34,0:34:96.29:0,96,2124	1/1:1,24:25:60.20:983,60,0	1/1:1,36:37:81.28:1348,81,0	0/0:30,0:30:84.29:0,84,1838	0/0:32,0:32:96.33:0,96,2125	0/0:38,0:38:99:0,111,2446	0/0:21,0:21:63.22:0,63,1411	1/1:1,26:27:69.24:1149,69,0	0/0:22,0:22:66.21:0,66,1451	1/1:0,28:28:69.24:1149,69,0	1/1:1,36:37:93.32:1549,93,0	0/0:37,0:37:99:0,108,2404	1/1:1,28:29:75.73:1249,76,0	0/0:23,0:23:66.18:0,66,1448	1/1:3,22:25:66.17:1044,66,0	1/1:2,14:16:32.73:517,33,0	1/1:2,43:45:97.95:1647,98,0	1/1:2,18:20:42.14:699,42,0	0/0:21,0:21:63.22:0,63,1395	0/0:34,0:34:99:0,99,2170	1/1:0,24:24:63.22:1049,63,0	0/1:5,30:35:39.74:1375,0,40	1/1:0,26:26:63.20:1049,63,0	1/1:1,9:10:18.06:288,18,0
chr10	65869802	.	CTA	C	3181.32	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=8.928;DP=717;FS=0.000;HRun=0;HaplotypeScore=92.4723;InbreedingCoeff=0.9997;MQ=74.00;MQ0=1;MQRankSum=-0.237;QD=41.32;ReadPosRankSum=-1.467;VQSLOD=4.4630;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:84.29:0,84,1657	0/0:10,0:10:30.10:0,30,607	0/0:30,0:29:81.16:0,81,1527	0/0:24,0:24:69.18:0,69,1213	0/0:20,0:20:60.21:0,60,1204	0/0:13,0:13:39.13:0,39,792	0/0:32,0:32:93.31:0,93,1833	1/1:0,25:25:75.24:1193,75,0	0/0:27,0:27:81.27:0,81,1597	1/1:0,15:15:45.12:681,45,0	1/1:0,12:12:30.10:489,30,0	0/0:21,0:21:60.21:0,60,1193	0/0:23,0:23:69.24:0,69,1390	0/0:33,0:33:99:0,99,2012	0/0:36,0:36:99:0,108,2119	1/1:0,25:24:60.18:979,60,0	0/0:47,0:46:99:0,141,2789	0/0:32,0:32:96.29:0,96,1882	0/0:27,0:27:81.28:0,81,1604	0/0:28,0:28:84.27:0,84,1646	0/0:34,0:34:99:0,102,2016	0/0:24,0:24:72.25:0,72,1457	0/0:18,0:18:51.16:0,51,1036	0/0:45,0:44:99:0,135,2703	0/0:22,0:22:66.23:0,66,1320	0/0:28,0:28:84.29:0,84,1692	0/0:26,0:26:78.25:0,78,1503	0/0:12,0:12:36.12:0,36,731
chr10	65869950	.	T	TG	2779.42	PASS	AB=0.750;AC=31;AF=0.554;AN=56;BaseQRankSum=3.160;DP=572;FS=0.000;HRun=10;HaplotypeScore=107.2770;InbreedingCoeff=0.4434;MQ=75.20;MQ0=0;MQRankSum=-1.094;QD=7.99;ReadPosRankSum=-0.674;VQSLOD=2.0522;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:41:67.91:0,68,545	0/1:7,0:7:9.17:9,0,84	0/0:15,0:15:25.88:0,26,192	0/0:11,0:14:22.79:0,23,146	0/0:34,0:35:67.92:0,68,547	0/1:11,5:16:36.77:52,0,37	0/1:6,16:22:4.18:371,0,4	1/1:22,0:22:38.25:177,38,0	0/0:5,0:24:32.58:0,33,94	1/1:21,0:21:42.85:177,43,0	1/1:18,0:18:32.29:136,32,0	1/1:9,17:26:36.96:372,37,0	0/0:30,1:31:25.87:0,26,366	1/1:5,11:16:9.02:96,9,0	1/1:8,18:26:18.05:192,18,0	1/1:24,0:24:50.95:211,51,0	1/1:7,13:20:2.92:223,3,0	0/0:22,0:23:52.95:0,53,424	0/1:8,5:13:51.53:106,0,52	0/1:10,4:14:15.15:55,0,15	0/1:10,10:20:31.23:110,0,31	0/1:13,7:20:71.55:120,0,72	0/0:19,0:20:37.98:0,38,302	0/0:20,0:20:35.94:0,36,295	1/1:10,14:24:2.33:209,2,0	1/1:11,5:16:8.99:85,9,0	1/1:3,10:13:21.03:214,21,0	1/1:4,5:9:6.02:64,6,0
chr10	65869954	.	G	GGC	3092.64	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-8.524;DP=528;FS=2.249;HRun=0;HaplotypeScore=92.0686;InbreedingCoeff=0.9512;MQ=76.22;MQ0=0;MQRankSum=-0.376;QD=37.26;ReadPosRankSum=2.227;VQSLOD=6.0436;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,102,1298	0/0:6,0:6:12.51:0,13,182	0/0:15,0:14:38.89:0,39,462	0/0:14,0:14:29.14:0,29,392	0/0:31,0:31:81.19:0,81,1118	0/0:12,0:12:21.46:0,21,193	0/0:24,0:24:51.71:0,52,309	1/1:5,17:22:53.92:772,54,0	0/0:22,0:22:56.89:0,57,468	1/1:1,19:20:54.10:872,54,0	1/1:1,15:16:38.92:624,39,0	0/0:25,0:25:42.19:0,42,217	0/0:25,0:25:63.63:0,64,853	0/0:13,0:13:13.76:0,14,76	0/0:23,0:23:30.47:0,30,188	1/1:0,23:24:57.20:984,57,0	0/0:21,0:21:37.88:0,38,241	0/0:20,0:20:60.17:0,60,848	0/0:11,0:11:22.28:0,22,195	0/0:15,0:15:27.07:0,27,217	0/0:19,0:19:28.38:0,28,229	0/0:19,0:19:40.13:0,40,363	0/0:19,0:19:51.12:0,51,676	0/0:18,0:18:54.13:0,54,704	0/0:19,0:19:37.22:0,37,252	0/0:15,0:15:36.75:0,37,286	0/0:12,0:12:24.25:0,24,125	0/0:6,0:6:5.19:0,5,20
chr10	65870327	.	G	GA	1191.41	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=-2.186;DP=620;FS=9.865;HRun=10;HaplotypeScore=81.3853;InbreedingCoeff=0.6784;MQ=64.44;MQ0=7;MQRankSum=-0.054;QD=16.55;ReadPosRankSum=-4.192;VQSLOD=2.1113;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:49,2:50:99:0,103,1048	0/0:6,0:6:8.98:0,9,74	0/0:12,0:8:23.78:0,24,181	0/1:10,0:7:27.12:27,0,92	0/0:23,0:22:50.89:0,51,413	0/0:10,1:11:0.98:0,1,214	0/0:23,0:23:43.90:0,44,470	1/1:13,29:40:87.18:909,87,0	1/1:3,17:20:36.09:384,36,0	0/0:31,0:31:34.05:0,34,485	0/0:13,0:14:28.99:0,29,225	0/0:16,0:16:41.93:0,42,345	0/0:19,0:19:41.67:0,42,344	0/0:22,0:22:47.86:0,48,394	0/0:25,0:25:56.91:0,57,468	0/0:21,0:22:55.95:0,56,446	0/0:35,0:35:64.49:0,64,663	0/0:24,0:24:53.88:0,54,437	0/0:25,1:25:59.92:0,60,492	0/0:20,0:21:55.93:0,56,442	0/0:20,0:20:56.93:0,57,468	0/0:10,0:10:29.95:0,30,242	0/0:18,0:18:41.90:0,42,342	0/0:32,0:31:68.48:0,68,683	0/0:18,0:17:35.94:0,36,296	0/0:36,0:36:86.88:0,87,714	0/0:23,1:24:27.90:0,28,436	0/0:9,0:8:11.64:0,12,139
chr10	65871159	.	A	ATATATATG	6808.56	PASS	AB=0.917;AC=36;AF=0.692;AN=52;BaseQRankSum=4.531;DP=353;FS=2.184;HRun=0;HaplotypeScore=108.0224;InbreedingCoeff=0.7117;MQ=57.45;MQ0=1;MQRankSum=-5.993;QD=26.91;ReadPosRankSum=-2.060;VQSLOD=4.1922;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:48.14:0,48,1168	1/1:6,0:6:5.85:108,6,0	0/1:6,0:3:0:0,0,0	./.	0/0:10,0:10:27.09:0,27,683	1/1:4,13:18:2.74:127,3,0	1/1:9,0:9:12.04:256,12,0	1/1:30,0:29:60.01:1059,60,0	0/0:5,0:5:9.03:0,9,215	1/1:19,0:19:48.10:1056,48,0	1/1:8,0:8:9.03:210,9,0	1/1:3,11:14:6.02:254,6,0	0/0:5,0:5:12.03:0,12,253	1/1:2,8:12:3.01:126,3,0	1/1:8,1:9:12.03:212,12,0	1/1:9,0:9:8.94:158,9,0	1/1:3,13:18:6.02:180,6,0	0/0:24,0:24:48.12:0,48,1024	1/1:12,0:11:18.06:530,18,0	1/1:8,0:8:3.01:96,3,0	./.	0/1:4,1:5:0:0,0,0	0/0:10,0:10:15.05:0,15,391	0/0:3,0:3:6.02:0,6,114	1/1:4,13:17:9.03:367,9,0	1/1:7,16:23:29.77:940,30,0	1/1:3,10:15:6.02:254,6,0	1/1:3,12:15:21.07:876,21,0
chr10	65871167	.	G	GTA	1361.30	PASS	AB=0.931;AC=21;AF=0.389;AN=54;BaseQRankSum=8.721;DP=347;FS=2.704;HRun=0;HaplotypeScore=98.2769;InbreedingCoeff=-0.2117;MQ=53.30;MQ0=2;MQRankSum=-4.923;QD=5.56;ReadPosRankSum=3.407;VQSLOD=3.0711;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:75.16:0,75,939	0/1:4,1:5:15.91:16,0,33	0/1:5,0:1:0:0,0,0	./.	0/0:9,0:9:27.09:0,27,371	0/1:18,1:19:13.97:34,0,14	0/1:7,0:7:51.11:61,0,51	0/1:32,0:31:99:175,0,341	0/0:7,0:7:15.05:0,15,205	0/1:16,5:21:99:277,0,196	0/1:7,2:9:29.04:77,0,29	0/1:14,0:14:31.82:39,0,32	0/0:5,0:5:12.02:0,12,139	1/1:11,0:11:2.99:24,3,0	0/1:10,0:10:70.20:70,0,87	0/1:6,3:9:52.56:53,0,106	0/1:18,1:19:46.74:47,0,67	0/0:22,0:22:53.64:0,54,680	0/1:10,1:10:53.42:90,0,53	1/1:5,1:6:2.98:22,3,0	0/0:7,1:8:6:0,6,57	0/0:3,0:3:0:0,0,0	0/0:9,0:9:15.05:0,15,206	0/0:3,0:3:6.02:0,6,82	0/1:17,0:17:28.99:47,0,29	0/1:21,0:21:21.27:234,0,21	0/1:14,1:15:15.90:40,0,16	1/1:12,2:14:23.03:211,23,0
chr10	65871171	.	ATG	A	1187.10	PASS	AB=0.840;AC=14;AF=0.259;AN=54;BaseQRankSum=3.999;DP=337;FS=6.517;HRun=0;HaplotypeScore=97.8027;InbreedingCoeff=-0.1742;MQ=52.61;MQ0=3;MQRankSum=-2.722;QD=6.74;ReadPosRankSum=0.237;VQSLOD=2.3902;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:75.23:0,75,1383	0/1:2,3:5:39.86:40,0,51	0/1:5,0:1:0:0,0,0	./.	0/0:10,0:10:30.07:0,30,513	0/0:16,0:16:6.80:0,7,87	0/1:2,5:7:85.34:120,0,85	0/1:24,13:35:99:356,0,359	0/0:6,0:6:15.05:0,15,223	0/1:20,3:23:99:177,0,286	0/1:6,2:8:26.60:124,0,27	0/0:12,0:12:12.01:0,12,137	0/0:4,0:4:12.03:0,12,182	0/0:8,0:8:3:0,3,27	0/1:6,4:10:99:116,0,169	0/1:10,1:11:17.79:18,0,124	0/1:21,0:21:32.47:32,0,145	0/0:24,0:24:56.93:0,57,984	0/1:10,3:11:98.56:128,0,99	1/1:3,2:5:3.01:46,3,0	0/0:8,0:8:6.02:0,6,90	0/0:2,0:2:0:0,0,0	0/0:7,0:7:18.06:0,18,320	0/0:2,0:2:6.02:0,6,112	0/0:13,0:13:12.03:0,12,152	0/1:17,0:17:99:164,0,188	0/0:15,0:15:8.05:0,8,91	0/1:14,0:14:8.77:9,0,99
chr10	65871173	.	G	GTA	419.30	PASS	AB=0.912;AC=15;AF=0.288;AN=52;BaseQRankSum=7.164;DP=325;FS=0.680;HRun=0;HaplotypeScore=104.3438;InbreedingCoeff=-0.1248;MQ=50.79;MQ0=3;MQRankSum=-4.907;QD=2.25;ReadPosRankSum=0.831;VQSLOD=2.0493;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:72.20:0,72,988	0/1:4,1:5:10.71:11,0,37	./.	./.	0/0:10,0:10:30.10:0,30,421	0/1:16,1:17:11.95:12,0,37	0/1:7,0:7:4.42:4,0,78	0/1:40,0:38:41.64:42,0,246	0/0:6,0:6:15:0,15,167	0/1:18,4:22:99:190,0,143	0/1:6,2:8:24.16:24,0,31	0/0:9,0:9:8.15:0,8,90	0/0:4,0:4:9.03:0,9,127	0/0:8,0:8:0.89:0,1,2	0/0:10,0:10:0.26:0,0,160	0/1:9,3:12:26.06:26,0,122	0/1:18,1:19:23.19:23,0,150	0/0:23,0:23:31.79:0,32,285	0/1:11,1:10:29.93:30,0,116	1/1:3,1:4:2.94:18,3,0	0/0:7,1:8:6.02:0,6,73	0/0:2,0:2:0:0,0,0	0/0:7,0:7:18.06:0,18,255	0/0:2,0:2:5.98:0,6,61	0/0:12,0:12:8.76:0,9,62	0/1:16,0:16:66.40:66,0,94	0/1:13,1:14:9.59:10,0,38	1/1:8,2:10:8.03:106,8,0
chr10	65871177	.	GTA	G	1437.71	PASS	AB=0.862;AC=14;AF=0.280;AN=50;BaseQRankSum=3.149;DP=323;FS=3.135;HRun=0;HaplotypeScore=98.8270;InbreedingCoeff=0.2124;MQ=50.83;MQ0=4;MQRankSum=-1.702;QD=10.65;ReadPosRankSum=-1.763;VQSLOD=2.8603;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,1:26:29.53:0,30,908	0/0:5,0:5:3:0,3,26	./.	./.	0/1:9,1:10:28.66:29,0,218	0/0:16,1:17:9.81:0,10,86	0/0:7,0:7:6:0,6,51	1/1:18,21:38:37.54:614,38,0	1/1:2,4:6:9.03:108,9,0	1/1:9,11:21:4.11:381,4,0	0/1:4,4:8:11.90:63,0,12	0/0:9,0:9:14.99:0,15,140	0/0:4,0:4:12.01:0,12,146	0/0:7,0:7:3.01:0,3,33	0/0:9,1:10:11.97:0,12,120	1/1:4,8:12:24.32:270,24,0	0/0:20,0:20:3.25:0,3,138	0/0:7,0:21:39.01:0,39,376	0/1:12,1:11:27.66:59,0,28	0/0:5,0:5:2.90:0,3,26	0/1:7,1:8:23.17:30,0,23	0/0:3,0:3:3:0,3,26	0/1:5,2:7:18.13:18,0,175	./.	0/0:11,0:11:12.02:0,12,121	0/0:14,0:14:24.01:0,24,231	0/0:14,1:15:11.38:0,11,93	0/1:10,0:10:20.50:20,0,106
chr10	65871179	.	A	ATG	865.39	PASS	AB=0.960;AC=13;AF=0.250;AN=52;BaseQRankSum=4.063;DP=329;FS=3.739;HRun=0;HaplotypeScore=103.0920;InbreedingCoeff=-0.1886;MQ=48.89;MQ0=4;MQRankSum=-2.465;QD=4.24;ReadPosRankSum=-1.821;VQSLOD=2.0107;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:74.28:0,74,1004	0/0:4,1:5:3.90:0,4,48	./.	./.	0/0:10,0:10:29.96:0,30,373	0/1:16,1:17:7.80:8,0,62	0/1:8,0:8:5.30:5,0,97	0/1:42,0:40:99:172,0,247	0/0:6,0:6:14.41:0,14,90	0/1:18,3:21:68.99:229,0,69	0/1:8,0:8:14.26:27,0,14	0/0:10,0:10:12.58:0,13,104	0/0:4,0:4:12.03:0,12,161	0/0:8,0:8:1.25:0,1,3	0/0:9,0:9:16.27:0,16,204	0/1:10,2:12:24.18:142,0,24	0/1:21,1:22:21.41:21,0,173	0/1:21,0:21:99:165,0,138	0/1:12,1:11:48.26:48,0,109	0/0:5,0:5:4.21:0,4,29	0/0:7,1:8:5.85:0,6,60	0/0:3,0:3:3:0,3,26	0/0:7,0:7:17.95:0,18,241	0/0:1,0:1:2.99:0,3,23	0/0:11,0:11:9.53:0,10,70	0/1:15,0:15:49.79:50,0,160	0/1:15,0:15:8.26:8,0,65	1/1:8,2:10:7.83:130,8,0
chr10	65871462	.	C	CT	10319.42	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=6.198;DP=542;FS=0.756;HRun=8;HaplotypeScore=74.9229;InbreedingCoeff=0.9568;MQ=76.29;MQ0=0;MQRankSum=-2.807;QD=27.67;ReadPosRankSum=0.474;VQSLOD=5.2918;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:84.02:0,84,763	1/1:0,5:5:12.04:139,12,0	0/0:13,0:13:27.01:0,27,244	0/0:11,0:11:17.97:0,18,156	0/0:13,0:13:36.02:0,36,329	1/1:0,17:17:48.09:538,48,0	1/1:6,19:25:2.24:534,2,0	1/1:7,18:25:57.11:623,57,0	0/0:18,0:18:41.97:0,42,370	1/1:1,24:25:69.19:785,69,0	1/1:0,11:11:27.04:297,27,0	1/1:3,17:20:51.15:589,51,0	0/0:19,0:19:54.01:0,54,489	1/1:4,14:18:45.12:511,45,0	1/1:1,31:32:62.63:956,63,0	1/1:1,22:23:66.20:762,66,0	1/1:2,30:31:75.22:866,75,0	0/0:27,0:27:66.03:0,66,604	1/1:3,14:18:17.46:413,17,0	1/1:1,16:17:42.09:471,42,0	1/1:5,12:17:36.11:415,36,0	1/1:0,10:10:24.07:277,24,0	0/0:17,1:19:12.44:0,12,356	0/0:19,0:19:48.01:0,48,435	1/1:2,11:13:36.10:407,36,0	1/1:3,16:19:23.68:526,24,0	1/1:3,23:26:69.19:796,69,0	1/1:4,14:18:36.11:415,36,0
chr10	65872397	.	G	GA	1123.93	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-2.734;DP=576;FS=5.400;HRun=6;HaplotypeScore=87.7768;InbreedingCoeff=0.9990;MQ=78.20;MQ0=0;MQRankSum=-2.132;QD=28.10;ReadPosRankSum=1.018;VQSLOD=4.1562;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:87.20:0,87,887	0/0:11,0:11:33.08:0,33,337	0/0:25,0:25:56.98:0,57,608	0/0:14,0:14:26.70:0,27,231	0/0:23,0:23:69.16:0,69,704	0/0:22,0:22:63.14:0,63,642	0/0:17,0:17:51.10:0,51,514	0/0:41,0:41:99:0,105,1060	1/1:3,13:16:33.11:415,33,0	0/0:21,0:21:63.13:0,63,632	0/0:17,0:17:48.10:0,48,483	0/0:22,0:22:60.13:0,60,612	0/0:18,0:18:54.06:0,54,528	0/0:17,0:17:51.12:0,51,520	0/0:17,0:17:45.10:0,45,459	0/0:22,0:22:63.13:0,63,636	0/0:18,0:18:54.09:0,54,542	1/1:1,23:24:66.21:830,66,0	0/0:18,0:18:42.07:0,42,417	0/0:20,0:20:51.11:0,51,520	0/0:17,0:17:42.09:0,42,428	0/0:15,0:15:42.10:0,42,429	0/0:23,0:23:66.15:0,66,673	0/0:17,0:17:48.11:0,48,490	0/0:29,0:29:81.18:0,81,826	0/0:30,0:30:78.17:0,78,796	0/0:19,0:19:51.08:0,51,511	0/0:14,0:14:36.08:0,36,367
chr10	65872512	.	T	TC	116.86	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-0.707;DP=586;FS=0.000;HRun=8;HaplotypeScore=95.9315;InbreedingCoeff=0.9126;MQ=84.46;MQ0=2;MQRankSum=-0.467;QD=10.62;ReadPosRankSum=-2.345;VQSLOD=2.0808;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:21:53.06:0,53,473	0/0:7,0:7:19.26:0,19,168	0/0:35,0:22:34.69:0,35,282	0/0:44,0:39:7.80:0,8,341	0/0:23,0:23:60:0,60,542	0/0:20,0:20:53.98:0,54,480	0/0:27,0:27:62.99:0,63,572	0/0:23,1:24:38.97:0,39,349	0/0:17,0:17:48.01:0,48,439	0/0:15,0:15:33:0,33,302	0/0:16,0:16:27:0,27,247	0/0:26,0:26:69.02:0,69,628	0/0:17,0:17:47.99:0,48,431	0/0:20,0:20:51.01:0,51,464	0/0:23,0:23:57.01:0,57,517	0/0:21,0:21:54.01:0,54,494	0/0:27,0:28:68.05:0,68,606	1/1:4,7:11:18.05:207,18,0	0/0:20,0:20:45:0,45,407	0/0:16,0:16:39.02:0,39,357	0/0:26,0:26:57:0,57,517	0/0:17,0:17:41.83:0,42,361	0/0:10,0:10:21:0,21,187	0/0:16,0:16:42.01:0,42,381	0/0:22,0:22:54.02:0,54,489	0/0:18,0:19:56.06:0,56,497	0/0:20,0:20:54.01:0,54,486	0/0:22,0:22:54.01:0,54,494
chr10	65874164	.	CG	C	21747.19	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=7.372;DP=714;FS=0.690;HRun=1;HaplotypeScore=74.4270;InbreedingCoeff=0.9764;MQ=85.10;MQ0=0;MQRankSum=-6.965;QD=39.11;ReadPosRankSum=4.986;VQSLOD=5.3002;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,99,1580	1/1:0,2:2:6.02:84,6,0	0/0:22,0:22:66.20:0,66,996	0/0:23,0:23:69.23:0,69,1064	0/0:7,0:7:18.06:0,18,287	1/1:0,17:17:45.15:629,45,0	1/1:0,50:50:99:2056,147,0	1/1:0,29:29:87.25:1162,87,0	1/1:0,29:29:84.28:1171,84,0	1/1:0,21:21:57.19:794,57,0	1/1:1,8:9:24.08:326,24,0	1/1:0,47:47:99:1845,132,0	0/0:32,0:32:90.25:0,90,1385	1/1:0,28:28:78.26:1091,78,0	1/1:0,37:37:99:1469,105,0	1/1:0,20:20:60.20:839,60,0	1/1:0,42:42:99:1552,111,0	1/1:0,42:42:99:1674,120,0	1/1:1,15:16:44.36:594,44,0	1/1:0,6:6:15.05:210,15,0	1/1:0,69:69:99:2643,190,0	1/1:1,16:17:45.15:628,45,0	0/0:13,0:13:33.11:0,33,525	0/0:27,0:27:81.28:0,81,1294	1/1:0,19:19:48.16:670,48,0	1/1:0,23:23:69.23:965,69,0	1/1:0,20:20:60.20:839,60,0	1/1:0,13:13:36.12:504,36,0
chr10	65875711	.	C	CAGACACA	42246.15	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=-4.866;DP=727;FS=4.403;HRun=0;HaplotypeScore=166.0485;InbreedingCoeff=0.9940;MQ=76.04;MQ0=0;MQRankSum=-17.891;QD=79.11;ReadPosRankSum=-1.566;VQSLOD=4.9544;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,108,2608	1/1:3,5:8:18.06:694,18,0	0/0:24,0:24:59.37:0,59,1449	0/0:23,0:23:63.16:0,63,1366	0/0:16,0:16:42.14:0,42,1057	1/1:6,10:20:45.11:1654,45,0	1/1:16,18:38:75.22:2825,75,0	1/1:21,13:35:84.29:2907,84,0	1/1:9,19:28:69.15:2411,69,0	1/1:14,10:25:78.25:2784,78,0	1/1:3,3:7:15.01:486,15,0	1/1:12,22:39:87.30:3289,87,0	0/0:35,0:35:99:0,102,2566	1/1:10,25:40:93.28:3416,93,0	1/1:5,23:32:75.26:2830,75,0	1/1:8,22:30:87.21:3043,87,0	1/1:10,21:34:69.24:2604,69,0	1/1:3,11:14:33.11:1290,33,0	1/1:13,4:18:45.14:1536,45,0	1/1:4,6:13:20.96:525,21,0	1/1:17,21:48:60.55:1781,61,0	1/1:11,16:28:53.93:1518,54,0	0/0:14,0:14:36.11:0,36,809	0/0:42,0:42:99:0,114,2795	1/1:9,8:18:39.09:1409,39,0	1/1:5,16:24:72.25:2545,72,0	1/1:7,13:22:54.14:1920,54,0	1/1:2,6:9:21.07:780,21,0
chr10	65877167	.	G	GC	18801.02	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=0.620;DP=714;FS=0.635;HRun=4;HaplotypeScore=83.0464;InbreedingCoeff=0.9999;MQ=78.61;MQ0=0;MQRankSum=-5.296;QD=36.79;ReadPosRankSum=2.184;VQSLOD=4.7847;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,99,1088	1/1:0,12:12:36.09:472,36,0	0/0:18,0:16:42.11:0,42,468	0/0:25,0:25:69.15:0,69,755	0/0:30,0:30:87.24:0,87,979	1/1:0,23:22:60.20:821,60,0	1/1:3,21:24:57.19:780,57,0	1/1:5,24:29:72.24:984,72,0	0/0:27,0:27:78.19:0,78,865	1/1:1,34:35:99:1334,102,0	1/1:0,13:13:33.11:450,33,0	1/1:2,31:33:90.29:1215,90,0	0/0:23,0:23:69.20:0,69,781	1/1:0,19:19:57.19:779,57,0	1/1:0,32:32:96.32:1313,96,0	1/1:2,32:34:87.29:1190,87,0	1/1:3,32:35:90.25:1195,90,0	1/1:2,22:24:63.21:862,63,0	1/1:1,20:22:63.15:815,63,0	1/1:1,24:25:72.24:981,72,0	1/1:0,20:20:51.17:698,51,0	1/1:1,32:33:90.30:1220,90,0	0/0:23,0:23:69.20:0,69,781	0/0:23,0:23:63.15:0,63,694	1/1:1,24:25:72.24:985,72,0	1/1:0,25:25:72.24:985,72,0	1/1:4,29:31:81.27:1107,81,0	1/1:0,15:15:45.15:615,45,0
chr10	65877376	.	TG	T	10292.45	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=6.555;DP=689;FS=17.938;HRun=8;HaplotypeScore=120.8518;InbreedingCoeff=0.9962;MQ=81.22;MQ0=0;MQRankSum=-1.570;QD=24.22;ReadPosRankSum=1.596;VQSLOD=3.5277;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:84.25:0,84,1003	1/1:1,9:10:24.04:232,24,0	0/0:22,0:23:15.20:0,15,330	0/0:17,0:18:41.50:0,41,407	0/0:27,0:27:78.22:0,78,919	1/1:1,30:31:81.13:782,81,0	1/1:0,18:18:48.08:464,48,0	1/1:3,20:23:57.08:550,57,0	0/0:26,0:26:69.20:0,69,822	0/0:9,0:28:57.64:0,58,305	0/0:3,0:13:28.89:0,29,168	1/1:3,28:31:75.12:724,75,0	0/0:31,0:31:87.24:0,87,1024	1/1:1,24:25:66.11:637,66,0	1/1:5,26:31:35.87:630,36,0	0/0:1,0:24:57.47:0,57,292	1/1:0,28:28:72.12:695,72,0	1/1:1,24:25:63.10:608,63,0	1/1:2,19:21:57.08:545,57,0	1/1:3,22:25:63.10:608,63,0	1/1:4,51:55:99:1304,135,0	1/1:1,21:22:63.10:608,63,0	0/0:15,0:15:39.09:0,39,448	0/0:27,0:27:72.20:0,72,857	1/1:2,22:24:54.08:521,54,0	1/1:5,23:28:66.08:630,66,0	1/1:1,21:22:60.10:579,60,0	1/1:0,6:6:18.03:174,18,0
chr10	65877953	.	T	TA	7814.77	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-8.592;DP=422;FS=9.702;HRun=0;HaplotypeScore=51.3015;InbreedingCoeff=0.9968;MQ=60.14;MQ0=1;MQRankSum=1.431;QD=37.21;ReadPosRankSum=4.133;VQSLOD=4.0013;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:63.20:0,63,862	1/1:0,11:11:30.10:479,30,0	0/0:22,0:15:30.31:0,30,485	0/0:22,0:15:39.12:0,39,525	0/0:11,0:11:33.11:0,33,460	1/1:0,13:12:39.13:623,39,0	1/1:2,16:18:39.13:623,39,0	0/0:25,0:25:69.23:0,69,965	0/0:8,0:8:24.08:0,24,336	0/0:17,0:17:42.14:0,42,588	0/0:11,0:11:33.10:0,33,441	1/1:1,13:14:24.08:384,24,0	0/0:9,0:9:27.09:0,27,377	1/1:0,14:13:36.12:575,36,0	1/1:1,17:18:45.15:719,45,0	0/0:11,0:11:33.11:0,33,461	1/1:3,17:19:48.16:740,48,0	0/0:25,0:24:69.20:0,69,938	1/1:2,10:13:30.10:470,30,0	1/1:1,13:14:27.09:432,27,0	1/1:0,17:17:36.12:574,36,0	1/1:1,7:9:18.06:279,18,0	0/0:9,0:9:24.08:0,24,336	0/0:20,0:20:54.17:0,54,738	1/1:0,13:13:27.09:431,27,0	1/1:0,9:9:27.09:432,27,0	1/1:1,16:17:42.14:671,42,0	1/1:0,10:10:24.08:383,24,0
chr10	65878391	.	A	AT	1119.34	PASS	AB=0.833;AC=3;AF=0.054;AN=56;BaseQRankSum=-8.221;DP=327;FS=0.000;HRun=6;HaplotypeScore=30.3639;InbreedingCoeff=0.4900;MQ=69.98;MQ0=0;MQRankSum=2.434;QD=27.30;ReadPosRankSum=-4.020;VQSLOD=1.4475;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:72.16:0,72,733	0/0:6,0:6:15.03:0,15,153	0/1:4,0:4:4:4,0,46	0/0:4,0:4:5.13:0,5,31	0/0:17,0:17:39.08:0,39,397	0/0:25,0:25:60.09:0,60,597	0/0:4,0:4:12.01:0,12,115	1/1:3,33:36:99:1213,99,0	0/0:6,0:6:18.04:0,18,183	0/0:13,0:13:33.07:0,33,337	0/0:5,0:5:15.03:0,15,153	0/0:8,0:8:18.04:0,18,183	0/0:3,0:3:6.01:0,6,61	0/0:5,0:5:15.03:0,15,153	0/0:7,0:7:15.03:0,15,153	0/0:6,0:6:12.02:0,12,122	0/0:13,0:13:36.08:0,36,367	0/0:18,0:18:48.11:0,48,488	0/0:22,1:23:19.84:0,20,466	0/0:8,0:8:15.03:0,15,153	0/0:5,0:5:15.03:0,15,153	0/0:2,0:2:6.01:0,6,61	0/0:4,0:4:12.01:0,12,116	0/0:4,0:4:12.03:0,12,122	0/0:24,0:24:66.14:0,66,672	0/0:21,0:21:57.13:0,57,581	0/0:13,0:13:33.07:0,33,336	0/0:15,0:15:45.10:0,45,459
chr10	65878558	.	A	AGC	4473.91	PASS	AB=1.000;AC=39;AF=0.722;AN=54;BaseQRankSum=1.085;DP=323;FS=0.631;HRun=0;HaplotypeScore=57.4816;InbreedingCoeff=0.8395;MQ=84.97;MQ0=1;MQRankSum=-2.985;QD=20.34;ReadPosRankSum=0.977;VQSLOD=4.9398;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:66.13:0,66,791	1/1:2,0:1:3.01:49,3,0	0/0:13,0:10:17.91:0,18,156	0/0:16,0:12:17.29:0,17,134	0/0:10,0:10:30.03:0,30,319	1/1:9,0:9:23.67:232,24,0	1/1:15,0:15:24.02:256,24,0	1/1:18,0:18:23.08:319,23,0	1/1:4,0:4:8.82:83,9,0	1/1:6,7:13:29.82:415,30,0	1/1:4,5:9:12.04:211,12,0	0/1:8,0:8:0:0,0,0	0/0:6,0:6:14.92:0,15,151	1/1:7,0:7:11.88:121,12,0	1/1:8,0:8:23.92:257,24,0	1/1:0,4:4:12.04:211,12,0	1/1:19,0:19:38.93:433,39,0	1/1:14,9:23:45.15:746,45,0	1/1:15,0:15:30.74:308,31,0	1/1:6,0:7:21.06:237,21,0	1/1:19,0:19:6:59,6,0	./.	0/0:6,0:6:18.02:0,18,201	0/0:18,0:18:48.12:0,48,607	1/1:12,0:11:5.72:29,6,0	1/1:8,0:8:20.96:205,21,0	1/1:10,0:10:23.79:268,24,0	1/1:4,6:10:3.01:33,3,0
chr10	65878561	.	G	GC	1694.49	PASS	AB=0.981;AC=36;AF=0.667;AN=54;BaseQRankSum=6.139;DP=353;FS=1.502;HRun=8;HaplotypeScore=62.5603;InbreedingCoeff=0.5168;MQ=79.97;MQ0=3;MQRankSum=-0.161;QD=7.18;ReadPosRankSum=0.182;VQSLOD=0.5118;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:33:43.46:0,43,334	1/1:2,0:1:2.97:20,3,0	0/0:14,0:9:4.18:0,4,28	0/0:19,0:12:12.53:0,13,71	0/0:11,0:11:11.89:0,12,96	1/1:11,0:11:20.68:139,21,0	0/1:13,0:13:7.10:104,0,7	1/1:8,0:18:20.14:111,20,0	1/1:4,0:4:5.95:43,6,0	0/1:11,0:12:4.89:74,0,5	0/1:9,0:9:21.06:21,0,59	1/1:2,9:11:0.47:1,0,0	0/0:7,0:7:5.99:0,6,55	1/1:8,0:8:9.90:68,10,0	1/1:12,0:12:23.30:155,23,0	0/1:5,0:5:10.22:27,0,10	1/1:23,0:23:33.13:230,33,0	1/1:25,0:25:43.38:192,43,0	1/1:16,0:16:22.54:161,23,0	1/1:7,0:7:20.76:143,21,0	1/1:18,0:18:7.98:50,8,0	./.	0/0:7,0:7:8.84:0,9,74	0/0:21,0:21:35.89:0,36,316	1/1:14,0:13:3.31:15,3,0	1/1:10,0:10:20.06:132,20,0	1/1:11,0:11:23.73:170,24,0	1/1:7,0:7:2.96:19,3,0
chr10	65878562	.	C	CG	3595.42	PASS	AB=0.918;AC=34;AF=0.630;AN=54;BaseQRankSum=1.093;DP=356;FS=3.456;HRun=1;HaplotypeScore=55.0041;InbreedingCoeff=0.5555;MQ=80.71;MQ0=3;MQRankSum=-1.655;QD=15.84;ReadPosRankSum=3.696;VQSLOD=3.9268;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:77.88:0,78,859	1/1:0,2:1:3.01:33,3,0	0/0:15,0:9:17.85:0,18,155	0/0:22,0:14:16.47:0,16,121	0/0:11,0:11:30.03:0,30,317	1/1:9,3:12:23.86:287,24,0	1/1:7,6:13:12.96:264,13,0	1/1:18,0:18:13.45:184,13,0	1/1:5,1:6:8.98:84,9,0	0/1:12,1:13:9.50:141,0,10	0/1:8,0:8:45.54:46,0,84	0/0:11,0:11:0.44:0,0,1	0/0:7,0:7:14.92:0,15,151	1/1:8,0:8:11.18:138,11,0	1/1:11,1:12:22.38:307,22,0	0/1:5,0:5:20.34:52,0,20	1/1:18,6:24:38.97:487,39,0	0/1:17,9:26:14.96:281,0,15	1/1:8,7:15:29.12:326,29,0	1/1:1,6:7:21.06:237,21,0	1/1:14,3:17:7.93:84,8,0	./.	0/0:7,0:7:18.01:0,18,198	0/0:20,0:20:56.61:0,57,664	1/1:3,11:13:5.09:41,5,0	1/1:8,2:10:22.58:258,23,0	1/1:6,5:11:24.08:314,24,0	1/1:6,0:6:3.01:33,3,0
chr10	65878569	.	C	CCG	2756.13	PASS	AB=1.000;AC=36;AF=0.667;AN=54;BaseQRankSum=6.643;DP=390;FS=1.165;HRun=0;HaplotypeScore=72.6643;InbreedingCoeff=0.5437;MQ=74.63;MQ0=7;MQRankSum=-0.460;QD=10.52;ReadPosRankSum=-0.723;VQSLOD=3.2141;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:30:58.76:0,59,575	1/1:1,0:2:3.01:51,3,0	0/0:22,0:7:1.65:0,2,28	0/0:25,0:13:17.81:0,18,77	0/0:13,0:13:20.62:0,21,179	1/1:7,0:15:23.60:183,24,0	1/1:1,2:15:21:249,21,0	0/1:14,0:16:12.99:13,0,25	1/1:2,0:8:6.02:88,6,0	0/1:12,0:12:38.77:52,0,39	0/1:7,0:7:3.96:4,0,109	1/1:13,0:13:3.43:19,3,0	0/0:8,0:8:11.96:0,12,126	1/1:5,1:11:12.84:87,13,0	1/1:12,0:13:38.70:306,39,0	0/1:5,0:5:14.15:14,0,31	1/1:20,0:24:36.13:318,36,0	1/1:20,9:31:63.50:591,64,0	1/1:8,0:17:35.57:276,36,0	1/1:6,0:7:17.80:135,18,0	1/1:4,4:19:13.95:116,14,0	./.	0/0:7,0:7:8.95:0,9,105	0/0:18,0:18:28.33:0,28,521	1/1:16,0:15:9.06:53,9,0	1/1:9,0:10:20.50:149,21,0	1/1:13,0:14:23.81:218,24,0	1/1:6,0:5:2.96:19,3,0
chr10	65880654	.	A	AAAG	3433.89	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-2.455;DP=462;FS=5.227;HRun=0;HaplotypeScore=91.9241;InbreedingCoeff=0.8728;MQ=68.26;MQ0=6;MQRankSum=-3.401;QD=29.60;ReadPosRankSum=0.053;VQSLOD=3.7569;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:93.21:0,93,1222	0/0:9,0:9:20.60:0,21,142	0/0:22,0:8:8.91:0,9,41	0/0:19,0:10:2.46:0,2,105	0/0:29,0:29:81.14:0,81,1040	0/0:15,0:15:29.26:0,29,186	0/0:8,0:8:20.53:0,21,173	1/1:16,17:28:13.76:695,14,0	0/0:11,0:11:3.61:0,4,28	1/1:3,20:23:63.60:958,64,0	1/1:3,13:17:36.06:654,36,0	0/0:10,0:10:20.32:0,20,115	0/0:16,0:16:39.09:0,39,526	0/0:6,0:6:11.61:0,12,66	0/0:17,0:17:32.03:0,32,192	1/1:2,13:15:33.11:665,33,0	0/0:28,0:28:55.42:0,55,342	1/1:27,0:27:53.52:462,54,0	0/0:12,0:9:21.86:0,22,168	0/0:19,0:19:42.02:0,42,294	0/0:3,0:3:8.71:0,9,49	0/0:4,0:4:11.74:0,12,73	0/0:12,0:12:36.04:0,36,437	0/0:10,0:10:20.78:0,21,262	0/0:18,0:18:41.01:0,41,286	0/0:22,0:22:42.56:0,43,298	0/0:10,0:10:20.10:0,20,116	0/0:9,0:9:20.83:0,21,205
chr10	65880657	.	G	GA	3708.86	PASS	AB=0.801;AC=41;AF=0.732;AN=56;BaseQRankSum=7.083;DP=469;FS=3.668;HRun=12;HaplotypeScore=75.0082;InbreedingCoeff=0.3564;MQ=68.37;MQ0=6;MQRankSum=-2.192;QD=9.84;ReadPosRankSum=2.245;VQSLOD=3.2501;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:36:67.54:0,68,487	1/1:3,6:9:12.02:117,12,0	1/1:20,0:7:2.09:16,2,0	0/1:19,0:10:15.80:16,0,78	0/0:26,0:29:52.70:0,53,370	1/1:4,11:15:21.03:204,21,0	0/1:2,5:7:19.60:125,0,20	0/1:30,0:29:1.37:108,0,1	1/1:2,2:11:17.37:115,17,0	0/1:21,0:22:4.49:115,0,4	1/1:14,0:17:30.24:132,30,0	1/1:1,9:10:21.03:204,21,0	0/0:13,0:14:33.87:0,34,227	1/1:0,7:7:12.02:117,12,0	1/1:2,15:17:30.05:292,30,0	1/1:15,0:15:13.01:109,13,0	1/1:3,24:28:44.24:461,44,0	1/1:29,0:29:48.41:203,48,0	1/1:6,6:10:4.14:162,4,0	1/1:7,12:19:30.06:268,30,0	1/1:1,5:6:9.01:88,9,0	1/1:2,3:5:6.48:59,6,0	0/0:10,0:13:25.83:0,26,180	0/1:9,1:10:37.53:38,0,86	1/1:4,14:18:11.14:270,11,0	0/1:7,14:22:2.07:254,0,2	1/1:2,9:12:20.87:189,21,0	0/1:5,6:11:31.71:46,0,32
chr10	65880658	.	A	AAG	2309.24	PASS	AB=0.984;AC=10;AF=0.179;AN=56;BaseQRankSum=0.879;DP=471;FS=4.953;HRun=0;HaplotypeScore=89.0521;InbreedingCoeff=0.6750;MQ=68.39;MQ0=6;MQRankSum=-1.288;QD=17.90;ReadPosRankSum=2.157;VQSLOD=3.6838;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:96.21:0,96,1260	0/0:9,0:9:19.97:0,20,126	0/0:20,0:7:3.98:0,4,31	0/0:20,0:10:8.77:0,9,164	0/0:29,0:29:82.01:0,82,1039	0/0:15,0:15:28.11:0,28,157	0/0:7,0:7:19.74:0,20,152	0/1:30,1:27:72.87:405,0,73	0/1:12,0:11:7.47:51,0,7	1/1:25,0:25:33.84:465,34,0	1/1:17,0:17:35.89:350,36,0	0/0:10,0:10:22.21:0,22,110	0/0:13,0:13:37.65:0,38,508	0/0:7,0:7:10.98:0,11,50	0/0:16,0:16:30.12:0,30,151	1/1:14,0:14:8.75:340,9,0	0/0:30,0:30:52.87:0,53,264	1/1:1,29:30:54.05:863,54,0	0/0:14,0:11:13.51:0,14,150	0/0:21,0:21:42.69:0,43,282	0/0:6,0:6:11.23:0,11,61	0/0:5,0:5:11.89:0,12,66	0/0:13,0:13:36.51:0,37,463	0/0:10,0:10:18.37:0,18,248	0/0:18,0:18:39.36:0,39,244	0/0:21,0:21:16.64:0,17,289	0/0:12,0:12:6.94:0,7,76	0/0:11,0:11:20.51:0,21,195
chr10	65881808	.	A	AGACT	29529.10	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=5.395;DP=662;FS=4.082;HRun=0;HaplotypeScore=120.1137;InbreedingCoeff=0.9851;MQ=76.92;MQ0=0;MQRankSum=-10.433;QD=60.63;ReadPosRankSum=2.354;VQSLOD=6.4635;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,138,2588	1/1:0,5:8:15.05:403,15,0	0/0:17,0:17:42.14:0,42,806	0/0:18,0:18:51.15:0,51,940	0/0:15,0:15:39.03:0,39,688	1/1:4,8:14:21.07:574,21,0	1/1:6,14:20:30.10:816,30,0	1/1:8,21:30:87.26:2124,87,0	1/1:2,24:28:66.23:1796,66,0	1/1:6,22:32:93.23:2143,93,0	1/1:1,14:15:24.08:641,24,0	1/1:4,30:34:87.30:2377,87,0	0/0:22,0:22:66.17:0,66,1116	1/1:4,15:20:51.18:1393,51,0	1/1:4,20:24:60.21:1640,60,0	1/1:3,24:27:72.25:1916,72,0	1/1:3,24:30:60.21:1599,60,0	1/1:0,23:24:54.19:1461,54,0	1/1:5,22:28:78.20:1884,78,0	1/1:1,13:17:30.09:819,30,0	1/1:4,32:38:75.26:2040,75,0	1/1:4,12:17:27.09:738,27,0	0/0:24,0:24:66.19:0,66,1179	0/0:29,0:29:69.20:0,69,1253	1/1:3,16:20:42.14:1148,42,0	1/1:2,32:36:99:2709,105,0	1/1:1,17:21:39.13:1063,39,0	1/1:0,4:4:9.03:246,9,0
chr10	65882936	.	C	CT	4925.93	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-13.634;DP=796;FS=2.159;HRun=1;HaplotypeScore=78.0432;InbreedingCoeff=0.9431;MQ=85.81;MQ0=0;MQRankSum=-0.912;QD=42.10;ReadPosRankSum=-2.002;VQSLOD=4.4902;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:58:99:0,162,2052	0/0:12,0:12:36.12:0,36,467	0/0:25,0:25:69.22:0,69,880	0/0:27,0:27:78.25:0,78,999	0/0:19,0:19:48.16:0,48,623	0/0:25,0:25:75.24:0,75,974	0/0:27,0:27:81.26:0,81,1052	1/1:1,34:35:99:1491,102,0	0/0:32,0:32:93.29:0,93,1189	1/1:0,20:20:57.17:826,57,0	1/1:0,11:11:27.09:405,27,0	0/0:41,0:41:99:0,117,1517	0/0:26,0:26:78.24:0,78,998	0/0:43,0:43:99:0,123,1596	0/0:48,0:48:99:0,138,1792	1/1:1,25:26:72.24:1079,72,0	0/0:33,0:33:96.31:0,96,1245	1/1:0,25:25:75.25:1124,75,0	0/0:21,0:21:63.20:0,63,818	0/0:21,0:21:60.17:0,60,751	0/0:66,0:66:99:0,196,2501	0/0:17,0:17:51.17:0,51,661	0/0:14,0:14:33.11:0,33,428	0/0:49,0:49:99:0,141,1768	0/0:16,0:16:48.16:0,48,619	0/0:28,2:30:0.33:0,0,1001	0/0:18,0:17:51.17:0,51,662	0/0:11,0:11:33.11:0,33,429
chr10	65883140	.	T	TTTTC	8502.12	PASS	AB=0.819;AC=30;AF=0.536;AN=56;BaseQRankSum=5.383;DP=684;FS=9.257;HRun=0;HaplotypeScore=145.8796;InbreedingCoeff=0.8407;MQ=70.19;MQ0=0;MQRankSum=-4.418;QD=23.36;ReadPosRankSum=0.294;VQSLOD=4.3616;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:90.30:0,90,1642	1/1:7,0:7:15.05:222,15,0	0/0:36,0:26:55.68:0,56,710	0/0:21,0:17:19.65:0,20,374	0/0:25,0:25:72.23:0,72,1318	1/1:22,0:22:47.28:804,47,0	1/1:24,0:24:31.50:489,31,0	0/0:30,0:29:66.82:0,67,748	0/1:10,13:22:12.47:491,0,12	0/0:27,0:27:78.08:0,78,847	0/0:14,0:14:10:0,10,352	1/1:28,0:28:10.79:435,11,0	0/0:25,0:25:63.18:0,63,1051	1/1:27,0:27:26.98:567,27,0	1/1:28,0:28:39:620,39,0	0/0:31,0:31:59.93:0,60,769	1/1:32,0:32:44.77:653,45,0	0/0:27,0:27:52.07:0,52,743	1/1:41,0:41:33.21:973,33,0	1/1:19,0:19:41.87:600,42,0	1/1:9,0:9:13.29:207,13,0	1/1:17,0:17:33.69:362,34,0	0/0:16,0:16:45.14:0,45,798	0/0:37,0:37:99:0,111,1947	1/1:28,0:28:43.69:663,44,0	0/1:18,0:18:45.34:335,0,45	1/1:32,0:31:60.92:820,61,0	1/1:9,0:9:18.05:263,18,0
chr10	65883141	.	T	TTTC	10350.32	PASS	AB=0.720;AC=29;AF=0.518;AN=56;BaseQRankSum=1.418;DP=693;FS=9.129;HRun=0;HaplotypeScore=129.1855;InbreedingCoeff=0.7854;MQ=69.63;MQ0=0;MQRankSum=-6.618;QD=27.97;ReadPosRankSum=1.510;VQSLOD=4.6046;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:90.30:0,90,1502	1/1:0,7:8:15.05:293,15,0	0/0:35,0:25:57.53:0,58,683	0/0:24,0:20:22.38:0,22,388	0/0:25,0:25:72.24:0,72,1199	1/1:3,20:23:45.63:1034,46,0	0/1:6,17:25:7.53:623,0,8	0/0:30,0:29:66.41:0,66,715	0/1:22,1:22:58.75:272,0,59	0/0:27,0:27:78.13:0,78,830	0/0:14,0:14:23.78:0,24,347	1/1:8,19:29:28.93:605,29,0	0/0:26,0:26:69.18:0,69,1053	1/1:8,18:28:34.37:806,34,0	1/1:6,19:27:38.72:776,39,0	0/0:30,0:30:60.13:0,60,738	1/1:9,21:32:30.62:729,31,0	0/0:28,0:28:60.63:0,61,750	1/1:15,24:40:16.08:1027,16,0	1/1:4,15:19:41.81:716,42,0	1/1:2,7:10:11.37:223,11,0	1/1:4,14:18:35.68:464,36,0	0/0:16,0:16:45.15:0,45,739	0/0:37,0:37:99:0,111,1794	1/1:4,24:28:45.14:910,45,0	0/1:8,11:19:59.62:385,0,60	1/1:8,19:31:66.35:1139,66,0	1/1:3,6:9:18.06:350,18,0
chr10	65883142	.	T	TTC	5810.46	PASS	AB=0.968;AC=26;AF=0.464;AN=56;BaseQRankSum=9.462;DP=687;FS=8.431;HRun=0;HaplotypeScore=136.0948;InbreedingCoeff=0.3936;MQ=68.97;MQ0=0;MQRankSum=-3.267;QD=14.94;ReadPosRankSum=3.800;VQSLOD=4.3166;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:90.29:0,90,1356	1/1:8,0:8:15.04:193,15,0	0/0:34,0:24:51.82:0,52,648	0/1:25,0:21:37.04:37,0,395	0/0:24,0:24:72.24:0,72,1082	1/1:21,1:22:31.19:574,31,0	0/1:24,1:25:10.85:342,0,11	0/0:29,0:28:72.67:0,73,712	0/1:22,0:21:77.14:169,0,77	0/0:28,0:28:81.06:0,81,804	0/0:14,0:14:35.54:0,36,340	0/1:28,1:29:18.81:334,0,19	0/0:26,0:26:75.14:0,75,1014	1/1:27,2:29:3.74:421,4,0	0/1:24,2:26:5.53:434,0,6	0/0:30,0:30:60.07:0,60,645	0/1:29,1:31:22.67:354,0,23	0/0:28,0:28:60.83:0,61,707	0/1:37,1:39:9.84:567,0,10	1/1:17,2:19:41.79:497,42,0	1/1:11,0:11:0.32:91,0,0	1/1:16,1:17:21.45:290,21,0	0/0:17,0:17:45.14:0,45,670	0/0:37,0:37:99:0,111,1637	1/1:25,1:27:37.70:484,38,0	0/1:19,0:19:43.46:245,0,43	1/1:30,1:30:41.84:564,42,0	1/1:8,1:9:18.04:215,18,0
chr10	65883144	.	TTC	T	4981.99	PASS	AB=0.987;AC=39;AF=0.696;AN=56;BaseQRankSum=8.852;DP=675;FS=5.598;HRun=0;HaplotypeScore=134.6106;InbreedingCoeff=0.7718;MQ=67.09;MQ0=0;MQRankSum=-2.144;QD=10.21;ReadPosRankSum=-1.482;VQSLOD=4.2402;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:90.22:0,90,1325	1/1:8,0:8:14.21:68,14,0	0/0:32,0:23:50.31:0,50,630	0/0:23,0:19:24.55:0,25,367	0/0:25,0:25:75.15:0,75,1028	1/1:22,0:22:32.79:178,33,0	0/1:24,1:25:7.75:129,0,8	0/1:31,0:30:45.79:207,0,46	0/1:22,0:21:2.55:95,0,3	1/1:24,2:26:55.48:518,55,0	1/1:13,1:14:37.80:220,38,0	1/1:28,1:29:27:191,27,0	0/0:23,0:23:69.19:0,69,1005	1/1:24,4:28:17.01:237,17,0	1/1:26,0:26:42.39:219,42,0	1/1:29,1:30:54.86:326,55,0	1/1:23,6:29:44.23:356,44,0	1/1:27,0:27:40.33:392,40,0	1/1:34,2:36:29.65:462,30,0	1/1:18,1:19:33.52:152,34,0	1/1:10,1:11:11:74,11,0	1/1:15,2:17:29.13:221,29,0	0/0:16,0:16:48.10:0,48,667	0/0:36,0:36:99:0,108,1617	1/1:26,1:27:35.82:183,36,0	1/1:22,0:22:40.83:350,41,0	1/1:28,3:30:48.78:351,49,0	1/1:8,0:8:14.58:55,15,0
chr10	65883145	.	TC	T	8640.58	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=9.071;DP=677;FS=0.000;HRun=1;HaplotypeScore=113.3493;InbreedingCoeff=0.9885;MQ=67.04;MQ0=0;MQRankSum=-5.419;QD=17.71;ReadPosRankSum=-1.778;VQSLOD=4.4287;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:90.22:0,90,1049	1/1:8,0:8:13.11:77,13,0	0/0:32,1:23:47.68:0,48,492	0/0:21,1:19:18.68:0,19,289	0/0:26,0:26:77.96:0,78,841	1/1:21,0:21:53.23:398,53,0	1/1:25,0:25:46.94:321,47,0	1/1:28,1:28:59.55:418,60,0	1/1:19,4:22:31.35:340,31,0	1/1:17,9:26:72.56:772,73,0	1/1:1,13:14:38.92:447,39,0	1/1:29,0:29:45.84:328,46,0	0/0:24,0:24:72.11:0,72,801	1/1:27,0:27:53.22:366,53,0	1/1:27,0:27:50.75:408,51,0	1/1:1,29:30:57.14:755,57,0	1/1:30,0:30:50.56:429,51,0	1/1:17,9:26:63.90:779,64,0	1/1:35,2:37:94.90:674,95,0	1/1:19,0:19:44.24:293,44,0	1/1:11,0:11:12.62:92,13,0	1/1:16,0:16:32.56:248,33,0	0/0:16,0:16:48.09:0,48,536	0/0:37,0:37:99:0,111,1290	1/1:27,0:27:44.50:326,44,0	1/1:21,2:23:60.61:510,61,0	1/1:31,0:30:68.52:506,69,0	1/1:9,0:9:20.83:154,21,0
chr10	65887015	.	CT	C	3781.73	PASS	AB=0.926;AC=11;AF=0.196;AN=56;BaseQRankSum=9.036;DP=669;FS=2.286;HRun=3;HaplotypeScore=70.1749;InbreedingCoeff=0.9277;MQ=89.35;MQ0=0;MQRankSum=-1.538;QD=26.82;ReadPosRankSum=0.048;VQSLOD=2.7640;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,135,1906	0/0:17,0:17:48.16:0,48,691	0/0:21,1:22:51.94:0,52,606	0/0:27,0:27:69.73:0,70,878	0/0:27,0:27:78.24:0,78,1088	0/0:17,0:17:51.14:0,51,695	0/0:28,0:28:81.22:0,81,1110	1/1:3,25:28:75.16:856,75,0	0/0:24,0:24:72.21:0,72,1000	1/1:1,25:26:72.21:879,72,0	1/1:1,14:15:35.98:445,36,0	0/0:23,0:23:66.20:0,66,916	0/0:19,0:19:57.15:0,57,751	0/0:19,0:19:54.18:0,54,776	0/0:27,0:27:81.24:0,81,1115	1/1:0,22:22:57.17:707,57,0	0/0:36,0:36:99:0,108,1512	1/1:0,25:25:72.23:892,72,0	0/0:18,0:18:51.16:0,51,717	0/0:16,0:16:48.16:0,48,685	0/0:35,0:35:99:0,105,1493	0/0:21,0:21:63.21:0,63,906	0/0:16,0:16:45.11:0,45,593	0/0:20,0:20:60.19:0,60,847	0/0:32,0:32:93.24:0,93,1248	0/1:23,2:25:2.16:2,0,829	0/0:22,0:22:66.18:0,66,897	0/0:15,0:15:45.15:0,45,648
chr10	65887570	.	TAC	T	5744.25	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=14.627;DP=747;FS=3.033;HRun=0;HaplotypeScore=91.5256;InbreedingCoeff=0.9981;MQ=85.67;MQ0=0;MQRankSum=-2.004;QD=40.17;ReadPosRankSum=-0.866;VQSLOD=6.4664;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,108,2023	0/0:7,0:7:18.06:0,18,337	0/0:28,0:28:81.23:0,81,1424	0/0:19,0:19:57.19:0,57,1025	0/0:19,0:19:57.20:0,57,1057	0/0:19,0:19:57.18:0,57,1028	0/0:22,0:22:60.21:0,60,1124	1/1:2,34:36:99:1460,102,0	0/0:23,0:23:66.23:0,66,1228	1/1:2,35:37:99:1545,105,0	1/1:0,17:17:48.16:707,48,0	0/0:43,0:43:99:0,126,2359	0/0:20,0:20:60.21:0,60,1114	0/0:43,0:43:99:0,123,2284	0/0:39,0:39:99:0,117,2149	1/1:1,29:30:78.26:1149,78,0	0/0:42,0:42:99:0,123,2294	1/1:0,23:23:60.20:884,60,0	0/0:20,0:20:57.19:0,57,1021	0/0:18,0:18:54.19:0,54,1011	0/0:48,0:48:99:0,135,2490	0/0:14,0:14:39.12:0,39,698	0/0:24,0:24:72.25:0,72,1339	0/0:25,0:25:75.26:0,75,1404	0/0:24,0:24:72.25:0,72,1348	0/0:35,0:35:99:0,105,1963	0/0:20,0:20:60.21:0,60,1109	0/0:14,0:14:42.14:0,42,779
chr10	65888608	.	A	AT	7815.58	PASS	AB=0.971;AC=44;AF=0.786;AN=56;BaseQRankSum=-3.081;DP=602;FS=0.833;HRun=11;HaplotypeScore=73.5211;InbreedingCoeff=0.7132;MQ=68.79;MQ0=0;MQRankSum=-2.585;QD=16.05;ReadPosRankSum=-1.031;VQSLOD=5.2179;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,101,772	1/1:3,7:11:0.65:174,1,0	0/1:15,0:14:8.42:8,0,74	0/1:19,0:16:11.09:11,0,16	0/0:18,0:19:52.83:0,53,398	1/1:4,18:23:53.94:532,54,0	1/1:8,21:29:31.71:483,32,0	1/1:23,0:23:38.42:172,38,0	1/1:1,2:17:31.58:189,32,0	1/1:16,0:16:32.93:147,33,0	1/1:19,0:19:38.55:174,39,0	1/1:3,9:12:15.03:152,15,0	0/0:22,0:22:17.44:0,17,318	1/1:2,12:14:0.81:190,1,0	1/1:8,19:27:57.11:577,57,0	1/1:24,0:23:49.46:221,49,0	1/1:4,32:35:75.15:761,75,0	1/1:24,0:24:52.33:238,52,0	1/1:3,14:17:42.06:418,42,0	1/1:3,17:23:39.39:502,39,0	1/1:7,35:46:52.06:828,52,0	1/1:3,16:19:45.09:457,45,0	0/0:18,1:19:17.34:0,17,312	0/0:18,0:18:44.80:0,45,348	1/1:2,7:9:15.03:152,15,0	1/1:5,17:22:51.09:510,51,0	1/1:3,23:26:66.13:670,66,0	1/1:3,10:15:9.50:249,9,0
chr10	65888613	.	T	TTTA	5294.38	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=-8.219;DP=612;FS=6.786;HRun=0;HaplotypeScore=108.7671;InbreedingCoeff=0.8340;MQ=63.98;MQ0=0;MQRankSum=-1.632;QD=40.42;ReadPosRankSum=0.045;VQSLOD=6.1244;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:36:99:0,105,1662	0/0:11,0:11:24.66:0,25,175	0/0:14,0:12:5.83:0,6,200	0/1:18,0:15:22.82:23,0,126	0/0:21,0:21:57.18:0,57,885	0/0:25,0:25:58.83:0,59,320	0/0:28,0:28:66.24:0,66,406	1/1:2,21:26:72.11:1246,72,0	0/0:18,0:18:4.64:0,5,65	1/1:1,19:20:48.10:923,48,0	1/1:0,16:17:45.04:871,45,0	0/0:10,0:10:14.16:0,14,68	0/0:21,0:21:57:0,57,825	0/0:16,0:16:31.81:0,32,223	0/0:25,0:26:68.47:0,68,388	1/1:0,23:23:54.19:1115,54,0	0/0:37,0:36:79.95:0,80,413	1/1:0,24:26:53.94:1116,54,0	0/0:21,0:21:57.72:0,58,305	0/0:23,0:23:38.29:0,38,224	0/0:45,0:45:86.27:0,86,525	0/0:17,0:17:48.58:0,49,253	0/0:19,0:19:50.99:0,51,768	0/0:17,0:17:51.15:0,51,785	0/0:8,0:8:17.21:0,17,96	0/0:22,0:23:59.74:0,60,342	0/0:27,0:27:74.35:0,74,401	0/0:17,0:17:30.20:0,30,207
chr10	65889066	.	TG	T	3547	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=9.257;DP=703;FS=2.177;HRun=6;HaplotypeScore=110.3606;InbreedingCoeff=0.9996;MQ=81.88;MQ0=0;MQRankSum=-3.795;QD=28.15;ReadPosRankSum=0.342;VQSLOD=3.1512;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,120,1558	0/0:10,0:10:27.08:0,27,341	0/0:25,0:25:32.67:0,33,676	0/0:20,0:20:45.14:0,45,549	0/0:20,0:20:54.13:0,54,686	0/0:24,0:24:66.21:0,66,868	0/0:31,0:31:90.28:0,90,1170	1/1:4,31:35:93.23:1000,93,0	0/0:25,0:25:72.22:0,72,933	1/1:5,18:23:48.11:516,48,0	1/1:0,16:16:45.11:484,45,0	0/0:18,0:18:51.17:0,51,670	0/0:19,0:19:54.18:0,54,709	0/0:21,0:21:63.20:0,63,828	0/0:30,0:30:78.23:0,78,998	1/1:1,27:28:72.18:774,72,0	0/0:25,0:25:72.22:0,72,929	1/1:0,24:24:72.18:774,72,0	0/0:17,0:17:45.13:0,45,575	0/0:30,0:30:69.22:0,69,907	0/0:46,0:46:99:0,132,1706	0/0:16,0:16:42.14:0,42,551	0/0:21,0:21:51.17:0,51,669	0/0:32,0:32:90.28:0,90,1169	0/0:23,0:23:63.20:0,63,828	0/0:32,1:33:61.05:0,61,1151	0/0:38,0:38:99:0,108,1407	0/0:11,0:11:30.10:0,30,391
chr10	65889177	.	C	CAA	16306.93	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=13.296;DP=688;FS=3.865;HRun=1;HaplotypeScore=116.1829;InbreedingCoeff=0.9989;MQ=76.72;MQ0=0;MQRankSum=-5.095;QD=31.66;ReadPosRankSum=0.698;VQSLOD=5.0258;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:44:99:0,126,1902	1/1:2,0:10:24.07:293,24,0	0/0:16,0:16:48.14:0,48,695	0/0:16,0:16:39.13:0,39,576	0/0:23,0:23:63.19:0,63,923	1/1:0,0:34:90.27:1078,90,0	1/1:0,0:23:57.17:658,57,0	1/1:1,0:38:99:1255,111,0	1/1:1,0:9:24.07:287,24,0	1/1:0,0:22:63.17:695,63,0	1/1:1,0:22:51.53:582,52,0	1/1:1,0:32:87.26:1034,87,0	0/0:24,0:24:69.22:0,69,1036	1/1:2,0:30:78.14:928,78,0	1/1:1,0:27:75.16:869,75,0	1/1:1,0:27:72.13:824,72,0	1/1:1,1:38:99:1241,105,0	1/1:1,0:23:63.19:754,63,0	1/1:3,0:19:54.13:627,54,0	1/1:2,0:24:56.04:660,56,0	1/1:2,0:48:99:1548,132,0	1/1:1,0:14:39.12:461,39,0	0/0:16,0:16:45.15:0,45,689	0/0:33,0:33:96.33:0,96,1470	1/1:0,0:10:24.07:287,24,0	1/1:0,1:27:78.67:879,79,0	1/1:0,0:21:60.19:765,60,0	1/1:0,0:17:48.15:580,48,0
chr10	65889865	.	T	TAA	6599.90	PASS	AB=0.606;AC=41;AF=0.732;AN=56;BaseQRankSum=-1.250;DP=603;FS=9.328;HRun=14;HaplotypeScore=86.8342;InbreedingCoeff=0.5572;MQ=70.95;MQ0=0;MQRankSum=-0.914;QD=13.33;ReadPosRankSum=-1.068;VQSLOD=3.0382;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:12,0:46:43.91:113,0,44	1/1:7,9:16:20.10:242,20,0	0/0:31,0:14:10.68:0,11,73	0/0:22,0:11:8.73:0,9,74	0/1:10,0:27:1.57:76,0,2	0/1:3,8:13:5.31:154,0,5	1/1:6,11:20:20.62:275,21,0	1/1:11,15:28:3.59:437,4,0	1/1:4,1:12:11.39:104,11,0	1/1:7,16:30:63.62:687,64,0	1/1:7,6:14:17.42:202,17,0	1/1:5,14:22:32.40:363,32,0	0/0:13,0:13:23.73:0,24,194	0/1:5,6:14:11.76:78,0,12	1/1:5,15:22:26.44:312,26,0	1/1:12,12:31:45.60:472,46,0	1/1:3,20:27:49.25:572,49,0	1/1:7,3:17:22.11:202,22,0	0/1:7,6:14:0.40:186,0,0	1/1:10,9:23:35.84:364,36,0	1/1:4,7:15:11.36:96,11,0	1/1:3,12:18:31.58:297,32,0	0/0:23,0:27:29.60:0,30,280	0/0:12,0:14:26.54:0,27,207	1/1:4,19:25:33.02:393,33,0	1/1:10,19:32:37.10:607,37,0	1/1:3,16:21:25.63:291,26,0	1/1:5,2:8:6.02:78,6,0
chr10	65890064	.	G	GGTGTGTGTGTGT	6320.38	PASS	AB=1.000;AC=36;AF=0.643;AN=56;BaseQRankSum=-1.627;DP=703;FS=3.278;HRun=0;HaplotypeScore=265.3599;InbreedingCoeff=0.6267;MQ=56.24;MQ0=12;MQRankSum=-5.706;QD=14.14;ReadPosRankSum=-6.110;VQSLOD=2.5567;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:47:58.05:0,58,1774	1/1:7,0:6:3.01:144,3,0	0/1:32,0:19:22.46:22,0,204	0/0:28,0:18:0.42:0,0,21	0/0:20,0:21:36.12:0,36,1130	1/1:20,0:18:2.46:24,2,0	1/1:29,1:32:8.81:458,9,0	1/1:44,0:43:6.29:120,6,0	1/1:20,3:24:9.50:505,10,0	0/1:17,0:16:23.43:23,0,83	0/0:21,0:21:25.78:0,26,194	1/1:21,0:21:10.21:291,10,0	0/0:26,0:27:54.10:0,54,1643	1/1:16,1:20:6.30:304,6,0	1/1:28,5:38:24.55:1123,25,0	0/0:45,0:45:61.53:0,62,601	1/1:15,0:15:3.01:39,3,0	0/0:22,0:22:25.27:0,25,289	1/1:26,0:23:11.40:316,11,0	1/1:13,5:19:9.03:414,9,0	1/1:26,0:26:8.53:170,9,0	1/1:15,7:22:3.95:176,4,0	0/0:15,0:14:12.03:0,12,336	0/0:27,0:28:45.15:0,45,1350	1/1:21,0:21:9.03:252,9,0	1/1:23,0:31:38.14:925,38,0	1/1:8,8:21:16.92:644,17,0	1/1:9,0:9:18.03:369,18,0
chr10	65890079	.	G	GTGTA	6193.17	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=-4.571;DP=768;FS=2.721;HRun=0;HaplotypeScore=165.8639;InbreedingCoeff=0.1664;MQ=54.02;MQ0=14;MQRankSum=2.185;QD=14.37;ReadPosRankSum=6.797;VQSLOD=3.9239;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:56:99:0,131,1594	0/0:11,0:10:8.97:0,9,71	0/0:37,0:20:18.13:0,18,451	0/0:39,0:26:68.71:0,69,661	0/0:24,0:24:66.05:0,66,871	0/0:21,0:19:23.52:0,24,193	0/0:31,0:31:16.87:0,17,237	1/1:7,39:47:99:1168,101,0	0/1:25,0:23:45.49:45,0,116	1/1:2,19:20:42.77:875,43,0	1/1:2,20:24:27.06:664,27,0	0/1:22,0:22:18.75:19,0,135	0/0:26,0:26:68.98:0,69,1117	0/1:25,0:25:14.05:14,0,112	0/1:39,0:39:99:107,0,136	1/1:5,36:45:64.75:2134,65,0	0/0:19,0:19:19.05:0,19,201	1/1:3,21:28:9.75:894,10,0	0/0:24,0:21:39.25:0,39,431	0/1:17,0:17:20.38:20,0,62	0/1:29,0:29:13.63:14,0,195	0/1:23,0:23:6.99:7,0,57	0/0:15,0:14:32.97:0,33,383	0/0:33,0:33:89.62:0,90,1165	0/1:21,0:21:41.87:42,0,103	0/1:32,0:32:46.49:46,0,439	0/1:23,0:23:71.01:71,0,131	0/1:9,0:9:10.65:72,0,11
chr10	65890576	.	GC	G	6172.21	PASS	AB=1.000;AC=31;AF=0.554;AN=56;BaseQRankSum=6.566;DP=510;FS=5.151;HRun=9;HaplotypeScore=84.0154;InbreedingCoeff=0.9140;MQ=80.07;MQ0=0;MQRankSum=-2.267;QD=21.89;ReadPosRankSum=2.714;VQSLOD=5.7129;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:93.22:0,93,1048	1/1:0,5:5:12.01:110,12,0	0/0:16,0:16:27.07:0,27,303	0/0:18,0:18:33.18:0,33,334	0/0:18,0:18:42.11:0,42,473	1/1:2,19:21:54.03:494,54,0	1/1:1,19:20:54.03:494,54,0	0/0:8,0:13:9.48:0,9,45	0/0:22,0:22:60.18:0,60,692	0/1:6,0:9:1.32:1,0,29	0/0:1,0:5:2.90:0,3,16	1/1:0,26:26:75.04:686,75,0	0/0:9,0:9:27.04:0,27,280	1/1:1,10:11:30.02:274,30,0	1/1:1,23:24:60.03:549,60,0	0/0:4,0:17:25.86:0,26,155	1/1:5,30:35:90.04:823,90,0	0/0:9,0:29:33.71:0,34,202	1/1:4,13:17:39.01:357,39,0	1/1:3,14:17:33.01:302,33,0	1/1:1,19:20:54.03:494,54,0	1/1:3,18:21:42.01:384,42,0	0/0:16,0:16:41.98:0,42,455	0/0:24,0:24:69.20:0,69,788	1/1:1,13:14:39.02:357,39,0	1/1:5,18:23:54:489,54,0	1/1:1,5:6:9:82,9,0	1/1:1,12:13:30.02:275,30,0
chr10	65891122	.	C	CG	5702.45	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=16.069;DP=772;FS=3.386;HRun=0;HaplotypeScore=85.8139;InbreedingCoeff=0.9981;MQ=82.01;MQ0=0;MQRankSum=-1.252;QD=37.27;ReadPosRankSum=0.846;VQSLOD=4.7802;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,125,1649	0/0:16,0:16:48.14:0,48,650	0/0:23,0:23:69.21:0,69,934	0/0:20,0:20:51.16:0,51,697	0/0:20,0:20:57.16:0,57,761	0/0:20,0:20:60.16:0,60,813	0/0:33,0:33:96.31:0,96,1325	1/1:0,33:33:99:1288,99,0	0/0:34,0:34:99:0,102,1408	1/1:2,19:21:57.19:743,57,0	1/1:0,22:22:66.21:875,66,0	0/0:26,0:26:78.26:0,78,1080	0/0:28,0:28:72.22:0,72,987	0/0:19,0:19:54.18:0,54,755	0/0:41,0:41:99:0,123,1719	1/1:0,38:38:99:1332,99,0	0/0:24,0:24:69.23:0,69,965	1/1:0,39:39:99:1464,108,0	0/0:17,0:17:48.16:0,48,671	0/0:21,0:21:57.17:0,57,779	0/0:56,0:56:99:0,163,2263	0/0:26,0:26:78.26:0,78,1090	0/0:22,0:22:63.21:0,63,879	0/0:40,0:40:99:0,117,1597	0/0:18,0:18:54.18:0,54,755	0/0:34,1:35:67.72:0,68,1389	0/0:30,0:29:90.30:0,90,1257	0/0:6,0:6:18.06:0,18,252
chr10	65891273	.	AG	A	1080.02	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.475;DP=808;FS=1.463;HRun=1;HaplotypeScore=78.2727;InbreedingCoeff=0.9999;MQ=78.77;MQ0=1;MQRankSum=-0.557;QD=38.57;ReadPosRankSum=-0.261;VQSLOD=3.9782;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:66,0:66:99:0,199,3155	0/0:16,0:16:45.15:0,45,719	0/0:25,0:25:59.62:0,60,1001	0/0:17,0:16:38.01:0,38,572	0/0:22,0:22:66.23:0,66,1052	0/0:15,0:15:45.14:0,45,695	0/0:35,0:34:99:0,105,1655	0/0:24,0:24:72.24:0,72,1132	1/1:0,28:28:84.28:1175,84,0	0/0:17,0:17:51.17:0,51,816	0/0:25,0:25:72.25:0,72,1150	0/0:34,0:34:99:0,102,1631	0/0:36,0:36:99:0,105,1678	0/0:33,0:33:99:0,99,1551	0/0:34,0:34:99:0,99,1556	0/0:34,1:35:63.40:0,63,1589	0/0:36,0:36:99:0,108,1720	0/0:31,0:31:93.32:0,93,1486	0/0:21,0:21:63.21:0,63,1002	0/0:21,0:21:63.21:0,63,1002	0/0:47,0:47:99:0,138,2163	0/0:25,0:25:75.26:0,75,1196	0/0:25,0:25:75.24:0,75,1176	0/0:35,0:35:99:0,105,1679	0/0:18,0:18:54.17:0,54,841	0/0:31,0:31:93.31:0,93,1465	0/0:36,0:36:99:0,108,1725	0/0:20,0:20:60.20:0,60,954
chr10	65892203	.	C	CA	4197.23	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-5.872;DP=549;FS=2.893;HRun=5;HaplotypeScore=61.1628;InbreedingCoeff=0.9967;MQ=72.58;MQ0=0;MQRankSum=-0.000;QD=33.05;ReadPosRankSum=-0.365;VQSLOD=4.0286;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:84.16:0,84,882	0/0:8,0:8:23.93:0,24,240	0/0:25,0:20:49.29:0,49,456	0/0:19,0:15:19.85:0,20,206	0/0:28,0:28:78.19:0,78,837	0/0:20,0:20:60.15:0,60,644	0/0:12,0:12:33.06:0,33,344	1/1:4,31:35:93.29:1205,93,0	0/0:10,0:10:30.06:0,30,314	1/1:3,19:22:57.14:704,57,0	1/1:0,18:18:48.16:632,48,0	0/0:29,0:29:81.16:0,81,847	0/0:18,0:18:48.12:0,48,515	0/0:15,0:15:45.11:0,45,484	0/0:18,0:18:54.10:0,54,563	1/1:3,13:16:33.11:434,33,0	0/0:13,0:13:36.06:0,36,377	1/1:3,33:36:93.30:1222,93,0	0/0:17,0:17:45.09:0,45,471	0/0:29,0:29:78.18:0,78,829	0/0:11,0:11:27.05:0,27,281	0/0:7,0:7:21.03:0,21,211	0/0:18,0:18:42.10:0,42,451	0/0:13,0:13:33.08:0,33,355	0/0:29,0:29:72.17:0,72,767	0/0:26,0:26:72.17:0,72,767	0/0:14,0:14:42.11:0,42,451	0/0:12,0:12:36.09:0,36,386
chr10	65892378	.	CA	C	462.99	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.631;DP=644;FS=5.216;HRun=3;HaplotypeScore=86.6168;InbreedingCoeff=0.9308;MQ=85.19;MQ0=1;MQRankSum=-1.598;QD=27.23;ReadPosRankSum=-0.328;VQSLOD=2.6452;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,120,1710	0/0:5,0:5:15.04:0,15,194	0/0:18,0:18:51.14:0,51,690	0/0:23,0:23:57.16:0,57,782	0/0:18,0:18:54.17:0,54,760	0/0:32,0:32:96.31:0,96,1363	0/0:21,0:21:63.21:0,63,907	0/0:29,0:29:84.28:0,84,1192	0/0:21,0:21:63.21:0,63,907	0/0:19,0:19:51.16:0,51,707	0/0:16,0:16:45.14:0,45,631	0/0:37,0:37:99:0,111,1597	0/0:25,0:25:75.25:0,75,1077	0/0:18,0:18:54.16:0,54,745	0/0:30,0:30:90.30:0,90,1296	0/0:28,0:28:84.28:0,84,1209	0/0:38,0:37:99:0,114,1603	1/1:1,16:17:45.14:558,45,0	0/0:19,0:19:57.18:0,57,800	0/0:15,0:15:42.14:0,42,604	0/0:34,0:33:96.31:0,96,1362	0/0:11,0:11:30.08:0,30,397	0/0:19,0:19:57.19:0,57,812	0/0:33,0:33:96.31:0,96,1362	0/0:22,0:22:63.20:0,63,887	0/0:33,0:33:99:0,99,1405	0/0:20,0:20:57.15:0,57,781	0/0:3,0:3:9.03:0,9,130
chr10	65894156	.	C	CA	2838.97	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=11.414;DP=546;FS=4.465;HRun=1;HaplotypeScore=70.3428;InbreedingCoeff=0.9753;MQ=83.09;MQ0=0;MQRankSum=-10.337;QD=37.35;ReadPosRankSum=-1.997;VQSLOD=3.2594;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,105,1466	0/0:5,0:5:12.03:0,12,152	0/0:14,0:14:18.27:0,18,360	0/0:20,0:20:51.05:0,51,677	0/0:9,0:9:27.09:0,27,377	0/0:21,0:21:60.20:0,60,835	0/0:40,0:40:99:0,120,1676	1/1:6,11:17:48.15:697,48,0	0/0:22,0:22:66.20:0,66,891	1/1:2,14:16:42.11:643,42,0	1/1:1,10:11:21.07:324,21,0	0/0:27,0:27:78.24:0,78,1071	0/0:8,0:8:24.06:0,24,317	0/0:30,0:30:90.29:0,90,1239	0/0:15,0:15:45.14:0,45,611	1/1:2,13:15:39.13:622,39,0	0/0:38,0:38:99:0,114,1589	1/1:1,16:17:9.27:724,9,0	0/0:20,0:20:60.19:0,60,819	0/0:10,0:10:27.08:0,27,357	0/0:42,0:42:99:0,123,1682	0/0:10,0:10:30.10:0,30,411	0/0:10,0:10:27.09:0,27,376	0/0:33,0:33:99:0,99,1385	0/0:16,0:16:48.15:0,48,652	0/0:19,0:19:51.16:0,51,697	0/0:18,0:18:54.17:0,54,739	0/0:8,0:8:24.06:0,24,318
chr10	65894162	.	A	AT	2052.58	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=12.196;DP=539;FS=3.971;HRun=6;HaplotypeScore=70.6588;InbreedingCoeff=0.9860;MQ=81.31;MQ0=0;MQRankSum=-10.537;QD=28.51;ReadPosRankSum=-1.188;VQSLOD=3.9376;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:96.21:0,96,977	0/0:5,0:5:12.03:0,12,122	0/0:12,0:12:28.25:0,28,256	0/0:19,0:19:46.29:0,46,440	0/0:8,0:8:24.05:0,24,245	0/0:21,0:21:54.10:0,54,544	0/0:41,0:41:99:0,102,1020	1/1:4,10:14:30.10:377,30,0	0/0:22,0:22:66.15:0,66,673	1/1:2,13:15:39.12:490,39,0	1/1:4,7:11:21.07:264,21,0	0/0:30,0:30:84.18:0,84,856	0/0:10,0:10:21.04:0,21,214	0/0:29,0:29:87.20:0,87,886	0/0:14,0:14:42.10:0,42,428	1/1:0,15:15:45.14:561,45,0	0/0:38,0:38:99:0,108,1102	1/1:3,14:17:17.58:535,18,0	0/0:18,0:18:39.08:0,39,397	0/0:10,0:10:21.04:0,21,214	0/0:41,0:41:99:0,108,1092	0/0:12,0:12:30.06:0,30,305	0/0:10,0:10:24.05:0,24,245	0/0:32,0:32:93.21:0,93,948	0/0:14,0:14:33.07:0,33,337	0/0:18,0:18:48.10:0,48,484	0/0:20,0:20:51.09:0,51,513	0/0:8,0:8:24.05:0,24,245
chr10	65894875	.	TCC	T	10163.99	PASS	AB=1.000;AC=41;AF=0.732;AN=56;BaseQRankSum=6.241;DP=613;FS=11.248;HRun=10;HaplotypeScore=98.2645;InbreedingCoeff=0.9377;MQ=70.27;MQ0=3;MQRankSum=-3.343;QD=21.95;ReadPosRankSum=5.450;VQSLOD=2.8712;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:48.12:0,48,695	1/1:0,11:11:29.82:313,30,0	0/0:22,0:18:34.79:0,35,458	0/0:18,0:14:5.65:0,6,301	0/0:19,0:22:55.65:0,56,774	1/1:7,18:25:54.13:601,54,0	1/1:0,19:19:54.15:602,54,0	0/1:11,0:11:0.83:1,0,2	1/1:2,26:28:72.15:789,72,0	1/1:24,0:24:52.08:221,52,0	1/1:17,0:17:29.45:121,29,0	1/1:1,24:25:63.16:702,63,0	0/0:25,0:25:48.10:0,48,700	1/1:7,19:25:53.86:580,54,0	1/1:3,29:32:84.21:936,84,0	1/1:42,0:42:96.29:397,96,0	1/1:1,21:23:62.90:681,63,0	1/1:18,0:18:37.55:156,38,0	1/1:3,14:17:42.10:467,42,0	1/1:4,19:23:42.06:468,42,0	1/1:2,22:24:54.14:602,54,0	1/1:1,14:15:39.10:434,39,0	0/0:17,0:19:41.32:0,41,557	0/0:21,0:21:54.18:0,54,852	1/1:2,13:15:27.06:301,27,0	1/1:2,18:20:59.50:624,60,0	1/1:4,34:39:95.94:1034,96,0	1/1:2,6:7:12.01:134,12,0
chr10	65894883	.	CCCT	C	4308.56	PASS	AB=0.917;AC=11;AF=0.196;AN=56;BaseQRankSum=-5.211;DP=632;FS=4.115;HRun=0;HaplotypeScore=132.2561;InbreedingCoeff=0.8749;MQ=69.29;MQ0=3;MQRankSum=-0.943;QD=30.13;ReadPosRankSum=1.392;VQSLOD=5.1917;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:63.05:0,63,898	0/0:15,0:14:21.30:0,21,146	0/0:20,0:16:41.72:0,42,712	0/0:17,0:13:34.04:0,34,554	0/0:29,0:29:80.67:0,81,1285	0/0:23,0:23:56.65:0,57,278	0/0:24,0:24:58.72:0,59,283	1/1:15,0:15:18.96:117,19,0	0/0:27,0:27:37.37:0,37,170	1/1:0,26:26:75.14:1065,75,0	1/1:2,18:20:36.03:563,36,0	0/0:26,0:26:58.24:0,58,233	0/0:23,0:23:63.01:0,63,1040	0/0:24,0:23:37.26:0,37,202	0/0:30,0:30:72.87:0,73,278	1/1:0,41:41:99:1827,114,0	0/0:22,0:22:36.85:0,37,164	1/1:1,18:19:45.10:694,45,0	0/0:19,0:19:38.04:0,38,249	0/0:23,0:23:50.58:0,51,289	0/0:24,0:24:50.79:0,51,213	0/0:16,0:16:38.44:0,38,170	0/0:17,0:17:42.89:0,43,755	0/0:21,0:21:57.17:0,57,1218	0/0:19,0:19:40.21:0,40,235	0/1:20,2:22:42.55:43,0,160	0/0:42,0:42:67.11:0,67,342	0/0:6,0:5:9.98:0,10,36
chr10	65894884	.	CCTT	C	2170.98	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-2.784;DP=653;FS=0.861;HRun=0;HaplotypeScore=142.1029;InbreedingCoeff=0.9794;MQ=68.30;MQ0=3;MQRankSum=-2.169;QD=18.09;ReadPosRankSum=2.320;VQSLOD=3.0983;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:64.02:0,64,1175	0/0:15,0:14:38.82:0,39,420	0/0:19,0:15:36.07:0,36,628	0/0:17,0:13:34.35:0,34,533	0/0:30,0:30:78.08:0,78,1294	0/0:23,0:23:66.06:0,66,724	0/0:26,0:26:75.17:0,75,869	1/1:6,9:15:21.05:257,21,0	0/0:27,0:27:72.01:0,72,674	1/1:26,0:26:58.05:477,58,0	1/1:19,0:19:32.46:311,32,0	0/0:26,0:26:69.04:0,69,678	0/0:28,0:28:66.17:0,66,1246	0/0:25,0:24:65.38:0,65,658	0/0:32,0:32:93.19:0,93,989	1/1:41,0:41:99:948,112,0	0/0:22,0:22:62.79:0,63,611	1/1:19,0:19:41.68:352,42,0	0/0:19,0:19:55.27:0,55,600	0/0:22,0:22:62.52:0,63,686	0/0:24,0:24:60.10:0,60,628	0/0:16,0:16:45.05:0,45,469	0/0:19,0:19:10.83:0,11,709	0/0:25,0:25:69.21:0,69,1334	0/0:19,0:19:45:0,45,552	0/0:22,0:22:15.59:0,16,576	0/0:41,0:42:99:0,104,1052	0/0:6,0:5:12.02:0,12,118
chr10	65896550	.	G	GT	4948.90	PASS	AB=0.868;AC=32;AF=0.571;AN=56;BaseQRankSum=-13.382;DP=507;FS=5.344;HRun=10;HaplotypeScore=74.6384;InbreedingCoeff=0.7934;MQ=78.83;MQ0=1;MQRankSum=0.205;QD=19.41;ReadPosRankSum=0.776;VQSLOD=5.7503;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,105,862	1/1:0,12:12:27.03:275,27,0	0/1:28,0:22:1.51:2,0,136	0/0:24,0:16:15.90:0,16,139	0/0:25,0:25:68.90:0,69,564	1/1:3,11:15:14.29:342,14,0	1/1:2,10:12:5.43:263,5,0	0/0:38,0:37:81.64:0,82,390	1/1:0,8:8:21.05:224,21,0	0/0:17,0:17:36.29:0,36,161	0/0:16,0:16:33.91:0,34,172	1/1:4,13:17:14.52:359,15,0	0/0:14,0:14:4.45:0,4,239	1/1:2,12:14:33.08:352,33,0	1/1:3,14:17:23.02:339,23,0	0/0:33,0:33:66.43:0,66,368	1/1:3,20:24:35.34:565,35,0	0/0:16,0:16:22.73:0,23,193	1/1:4,12:16:36.09:383,36,0	1/1:3,12:15:36.09:384,36,0	1/1:0,3:3:3.01:32,3,0	1/1:0,5:5:15.04:160,15,0	0/0:11,0:12:25.99:0,26,202	0/0:19,0:19:50.93:0,51,419	1/1:1,10:11:24.06:254,24,0	0/1:9,5:14:6.31:139,0,6	1/1:3,15:18:42.11:448,42,0	1/1:5,21:26:0.16:428,0,0
chr10	65897701	.	AACACAC	A	1197.39	PASS	AB=0.971;AC=26;AF=0.619;AN=42;BaseQRankSum=5.327;DP=415;FS=9.072;HRun=0;HaplotypeScore=80.0622;InbreedingCoeff=0.5352;MQ=63.91;MQ0=28;MQRankSum=-5.556;QD=8.32;ReadPosRankSum=0.661;VQSLOD=0.8784;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:24:18.06:0,18,414	./.	./.	./.	0/0:7,0:7:12.04:0,12,357	1/1:9,1:10:6.02:103,6,0	./.	0/0:21,0:21:12.01:0,12,259	1/1:8,0:11:1.77:4,2,0	./.	1/1:6,0:6:3.01:42,3,0	1/1:8,1:10:6.02:103,6,0	0/0:5,0:5:6.02:0,6,193	1/1:10,5:15:12.04:218,12,0	1/1:9,5:14:12.04:195,12,0	0/0:20,0:19:8.99:0,9,246	1/1:7,2:8:6.02:121,6,0	0/1:18,0:18:34.31:75,0,34	./.	1/1:6,1:7:3.01:61,3,0	./.	1/1:4,5:9:6.02:121,6,0	0/0:10,0:10:18.06:0,18,474	0/0:22,0:22:21.07:0,21,608	1/1:6,1:8:8.86:148,9,0	0/1:15,0:16:5.55:36,0,6	1/1:6,0:8:6.01:84,6,0	1/1:1,0:2:3.01:42,3,0
chr10	65897735	.	CACACACACACACTT	C	526.99	PASS	AB=0.900;AC=4;AF=0.071;AN=56;BaseQRankSum=3.139;DP=412;FS=0.000;HRun=0;HaplotypeScore=131.8899;InbreedingCoeff=-0.0762;MQ=58.98;MQ0=30;MQRankSum=2.565;QD=11.21;ReadPosRankSum=-0.885;VQSLOD=2.4087;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:24:37.80:0,38,2024	0/0:4,0:4:5.55:0,6,72	0/0:41,0:15:28.05:0,28,574	0/0:43,0:8:17.69:0,18,229	0/0:10,0:10:24.08:0,24,1261	0/0:15,0:14:34.36:0,34,624	0/0:9,0:9:18.06:0,18,508	0/1:10,0:9:99:110,0,455	0/0:14,0:14:31.35:0,31,1008	0/1:11,0:11:16.62:310,0,17	0/1:2,4:6:38.21:126,0,38	0/0:13,0:13:31.23:0,31,914	0/0:9,0:9:21.07:0,21,917	0/0:12,0:12:24.08:0,24,639	0/0:12,0:12:30.10:0,30,869	0/1:20,0:19:90.97:91,0,513	0/0:14,0:14:36.12:0,36,859	0/0:19,0:19:18.06:0,18,373	0/0:9,0:9:27.06:0,27,480	0/0:6,0:6:15.05:0,15,369	0/0:23,0:19:29.67:0,30,744	0/0:16,0:15:29.63:0,30,650	0/0:7,0:7:21.07:0,21,1041	0/0:14,0:14:30.10:0,30,1546	0/0:11,0:10:24.08:0,24,440	0/0:16,0:16:45.15:0,45,1127	0/0:17,0:17:43.54:0,44,1154	0/0:3,0:3:9.03:0,9,149
chr10	65897743	.	CACACTT	C	946.65	PASS	AB=0.946;AC=13;AF=0.232;AN=56;BaseQRankSum=7.296;DP=370;FS=4.935;HRun=0;HaplotypeScore=82.3696;InbreedingCoeff=0.0337;MQ=69.38;MQ0=19;MQRankSum=-1.992;QD=7.82;ReadPosRankSum=0.776;VQSLOD=1.3846;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:22:36.06:0,36,993	0/0:3,0:3:5.99:0,6,72	0/0:41,0:22:36.86:0,37,844	0/0:33,0:12:18.51:0,19,369	0/0:10,0:10:24.07:0,24,633	0/1:9,0:9:0.26:0,0,226	0/0:8,0:8:21.07:0,21,363	0/1:9,0:8:99:192,0,133	0/0:13,0:13:31:0,31,387	1/1:10,0:10:30.10:400,30,0	1/1:5,0:5:2.90:57,3,0	0/0:12,0:12:3.60:0,4,410	0/0:9,0:9:24.08:0,24,518	0/1:10,0:10:52.42:52,0,224	0/1:11,0:11:36.55:37,0,260	0/1:20,0:19:99:177,0,101	0/0:17,0:16:4.44:0,4,596	0/1:1,16:17:11.89:144,0,12	0/0:10,0:10:29.99:0,30,439	0/1:6,0:6:10.86:11,0,135	0/0:20,0:16:35.83:0,36,530	0/1:16,0:15:16.21:16,0,307	0/0:7,0:7:18.06:0,18,451	0/0:12,0:12:30.09:0,30,689	0/1:8,0:7:10.37:10,0,168	0/0:14,0:14:36.66:0,37,573	0/0:15,0:15:30.78:0,31,578	0/0:2,0:2:3.48:0,3,49
chr10	65897747	.	CTT	C	936.96	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=3.090;DP=362;FS=7.578;HRun=2;HaplotypeScore=59.6343;InbreedingCoeff=0.8680;MQ=71.55;MQ0=20;MQRankSum=2.870;QD=17.68;ReadPosRankSum=0.075;VQSLOD=0.6479;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:21:41.99:0,42,695	0/0:3,0:3:6.46:0,6,74	0/0:43,0:24:40.23:0,40,899	0/0:34,0:13:32.66:0,33,409	0/0:9,0:9:21.54:0,22,381	0/0:9,0:9:25.31:0,25,348	0/0:7,0:8:21.07:0,21,363	1/1:1,8:8:21.06:287,21,0	0/0:14,0:14:34.32:0,34,468	1/1:0,11:11:33.11:445,33,0	1/1:4,1:5:3:29,3,0	0/0:14,0:14:39.56:0,40,588	0/0:8,0:8:21.06:0,21,330	0/0:10,0:10:27.02:0,27,347	0/0:11,0:11:30:0,30,408	1/1:10,2:11:23.42:275,23,0	0/0:17,0:16:48.14:0,48,729	1/1:16,0:16:6:60,6,0	0/0:10,0:10:29.99:0,30,439	0/0:7,0:7:15.03:0,15,222	0/0:21,0:17:36.56:0,37,555	0/0:17,0:16:33.50:0,33,437	0/0:5,0:5:12.04:0,12,217	0/0:8,0:8:18.06:0,18,311	0/0:7,0:6:18.03:0,18,232	0/0:13,0:13:39.12:0,39,598	0/0:16,0:16:45.11:0,45,666	0/0:2,0:2:6.02:0,6,77
chr10	65898036	.	T	TA	3502.68	PASS	AB=0.929;AC=12;AF=0.214;AN=56;BaseQRankSum=-5.856;DP=594;FS=5.707;HRun=8;HaplotypeScore=56.9731;InbreedingCoeff=0.8050;MQ=67.91;MQ0=0;MQRankSum=-1.167;QD=25.57;ReadPosRankSum=-3.338;VQSLOD=3.0858;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,99,896	0/0:5,0:5:14.99:0,15,132	0/1:5,1:6:9.68:10,0,18	0/1:7,0:7:9.50:10,0,50	0/0:26,0:26:69.01:0,69,621	0/0:19,0:19:54.03:0,54,494	0/0:31,0:32:92.05:0,92,819	1/1:7,26:33:75.13:801,75,0	0/0:17,0:17:39:0,39,357	1/1:3,23:26:69.16:763,69,0	1/1:1,14:15:42.06:468,42,0	0/0:18,0:18:51.01:0,51,460	0/0:20,0:20:54.01:0,54,487	0/0:20,0:20:57.02:0,57,517	0/0:36,0:36:99:0,102,919	1/1:3,17:20:45.13:519,45,0	0/0:34,0:34:84.01:0,84,763	1/1:0,30:30:81.24:933,81,0	0/0:17,0:17:44.94:0,45,392	0/0:19,0:19:47.99:0,48,427	0/0:18,0:18:48:0,48,436	0/0:16,0:16:42.01:0,42,384	0/0:23,0:23:60.02:0,60,545	0/0:15,0:15:36:0,36,325	0/0:15,0:15:36.02:0,36,329	0/0:21,0:21:57.02:0,57,521	0/0:32,1:33:64.43:0,64,826	0/0:16,0:16:44.93:0,45,386
chr10	65898522	.	TGGA	T	6279.64	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=12.862;DP=736;FS=4.912;HRun=0;HaplotypeScore=104.8137;InbreedingCoeff=0.9970;MQ=70.85;MQ0=5;MQRankSum=-3.193;QD=40.00;ReadPosRankSum=-1.467;VQSLOD=5.6732;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,129,2860	0/0:9,0:9:27.09:0,27,631	0/0:30,0:28:78.21:0,78,1515	0/0:26,0:24:67.44:0,67,1390	0/0:25,0:24:69.24:0,69,1567	0/0:22,0:22:63.22:0,63,1465	0/0:30,0:30:84.29:0,84,1958	1/1:6,42:46:99:2035,126,0	0/0:20,0:20:60.21:0,60,1374	1/1:1,27:27:81.23:1347,81,0	1/1:5,20:23:46.71:797,47,0	0/0:21,0:21:60.21:0,60,1355	0/0:23,0:23:63.22:0,63,1386	0/0:21,0:21:63.22:0,63,1462	0/0:32,0:32:93.31:0,93,2147	1/1:2,29:31:63.22:1097,63,0	0/0:19,0:19:57.13:0,57,1278	1/1:0,25:25:57.20:1005,57,0	0/0:24,0:24:63.22:0,63,1462	0/0:25,0:25:69.21:0,69,1531	0/0:48,0:48:99:0,138,3134	0/0:26,0:26:78.27:0,78,1772	0/0:26,0:26:72.25:0,72,1619	0/0:28,0:28:84.29:0,84,1944	0/0:20,0:20:60.20:0,60,1359	0/0:23,1:24:16.29:0,16,1488	0/0:22,0:22:66.23:0,66,1551	0/0:14,0:14:42.14:0,42,982
chr10	65899312	.	C	CGG	2062.74	PASS	AB=0.552;AC=31;AF=0.574;AN=54;BaseQRankSum=5.557;DP=418;FS=5.599;HRun=8;HaplotypeScore=71.4180;InbreedingCoeff=0.9031;MQ=87.07;MQ0=0;MQRankSum=0.061;QD=9.25;ReadPosRankSum=1.647;VQSLOD=0.1732;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:92.65:0,93,1025	./.	0/0:22,0:22:40.04:0,40,418	0/0:17,0:17:29.70:0,30,292	0/0:6,0:7:12.02:0,12,185	1/1:3,15:18:30.10:476,30,0	0/1:3,0:16:5.47:58,0,5	0/0:22,0:22:33.02:0,33,368	1/1:1,0:16:29.94:103,30,0	0/0:21,0:21:45.08:0,45,501	0/0:9,0:9:24.05:0,24,258	1/1:1,0:14:24.78:86,25,0	0/0:22,0:22:57.11:0,57,634	1/1:1,1:14:28.48:172,28,0	1/1:2,0:12:12.35:46,12,0	0/0:20,0:20:54.13:0,54,601	1/1:3,0:24:37.43:130,37,0	1/1:0,19:19:42.14:667,42,0	1/1:2,0:9:13.36:45,13,0	1/1:1,0:7:10.45:46,10,0	1/1:3,1:30:42.81:184,43,0	1/1:2,0:6:10.08:36,10,0	0/0:7,0:7:17.78:0,18,194	0/0:8,0:8:24.02:0,24,254	1/1:2,0:10:12.48:43,12,0	1/1:0,0:6:15.72:72,16,0	1/1:5,0:14:14.81:52,15,0	1/1:3,0:8:15.47:66,15,0
chr10	65900685	.	C	CG	1983.65	PASS	AB=0.792;AC=8;AF=0.160;AN=50;BaseQRankSum=-8.513;DP=355;FS=5.393;HRun=2;HaplotypeScore=40.0988;InbreedingCoeff=0.5510;MQ=67.29;MQ0=0;MQRankSum=0.395;QD=27.94;ReadPosRankSum=-0.600;VQSLOD=2.7654;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:60.19:0,60,741	0/0:4,0:4:9.03:0,9,112	0/0:3,0:3:6.88:0,7,58	0/0:3,0:3:9.02:0,9,105	0/0:2,0:2:2.98:0,3,21	./.	0/0:40,0:40:99:0,102,1261	1/1:1,13:14:39.09:503,39,0	0/0:9,0:9:24.07:0,24,297	1/1:0,15:15:41.95:575,42,0	./.	0/0:4,0:4:12.04:0,12,148	0/0:8,0:8:18.06:0,18,223	0/0:12,0:12:27.08:0,27,334	0/0:3,0:3:6.02:0,6,74	0/1:1,1:2:31.18:37,0,31	0/0:19,0:19:57.18:0,57,704	1/1:2,27:29:69.23:993,69,0	0/0:12,0:12:30.09:0,30,371	./.	0/0:74,0:74:99:0,202,2461	0/0:7,0:7:15.05:0,15,186	0/0:2,0:2:6.02:0,6,74	0/0:36,0:36:99:0,99,1201	0/0:11,0:11:21.06:0,21,260	0/1:10,1:11:22.15:22,0,202	0/0:3,0:3:6.02:0,6,74	0/0:8,0:8:24.08:0,24,297
chr10	65901161	.	GC	G	145.37	PASS	AB=0.833;AC=4;AF=0.071;AN=56;BaseQRankSum=3.764;DP=291;FS=4.820;HRun=11;HaplotypeScore=34.8233;InbreedingCoeff=0.1446;MQ=75.65;MQ0=0;MQRankSum=0.505;QD=5.19;ReadPosRankSum=2.420;VQSLOD=0.3084;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:36.04:0,36,359	0/0:6,0:6:8.97:0,9,76	0/0:15,0:13:4.95:0,5,72	0/0:5,0:3:0.47:0,0,1	0/1:4,1:5:15.62:16,0,55	0/0:14,1:15:8.43:0,8,288	0/0:20,2:22:23.38:0,23,410	0/0:10,1:11:15.03:0,15,153	1/1:3,10:13:2.66:216,3,0	0/0:5,0:5:3:0,3,26	0/0:3,0:3:8.83:0,9,63	0/0:13,1:14:5.42:0,5,256	0/0:6,0:6:12.02:0,12,121	0/0:10,1:11:5.39:0,5,236	0/0:7,0:7:21.04:0,21,217	0/0:3,0:6:11.52:0,12,68	0/0:13,1:14:8.44:0,8,295	0/0:19,2:21:10.88:0,11,527	0/1:7,2:10:6.76:7,0,124	0/0:5,0:5:6.02:0,6,64	0/0:26,2:28:11.22:0,11,466	0/0:5,0:5:2.78:0,3,13	0/0:6,0:6:12.03:0,12,128	0/0:9,0:9:21.05:0,21,224	0/0:9,0:9:14.99:0,15,136	0/0:3,0:4:2.21:0,2,58	0/0:13,0:13:27.02:0,27,264	0/0:3,0:3:2.99:0,3,24
chr10	65901571	.	GA	G	5658.76	PASS	AB=0.722;AC=35;AF=0.625;AN=56;BaseQRankSum=6.426;DP=528;FS=1.239;HRun=11;HaplotypeScore=64.8269;InbreedingCoeff=0.7419;MQ=77.69;MQ0=0;MQRankSum=0.869;QD=16.50;ReadPosRankSum=-0.260;VQSLOD=5.4178;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:39:53.35:0,53,713	0/1:3,6:9:11.01:127,0,11	0/1:22,1:20:46.23:46,0,74	0/0:19,0:11:8.22:0,8,58	0/0:14,1:16:4.29:0,4,327	1/1:8,15:23:47.85:386,48,0	1/1:2,23:25:59.90:493,60,0	1/1:4,20:25:61.92:491,62,0	1/1:0,16:16:44.95:369,45,0	0/0:27,0:29:65.83:0,66,668	0/0:9,0:10:26.89:0,27,262	1/1:1,14:15:38.96:320,39,0	0/0:12,0:15:26.92:0,27,261	1/1:2,18:20:15.95:337,16,0	1/1:1,17:18:38.95:320,39,0	0/0:22,0:23:59.19:0,59,589	0/1:5,9:14:8.01:148,0,8	1/1:2,0:22:36.66:106,37,0	1/1:1,19:20:56.91:465,57,0	1/1:2,12:14:35.16:277,35,0	1/1:5,14:20:9:269,9,0	1/1:2,7:10:23.01:179,23,0	0/0:8,0:9:26.94:0,27,270	0/0:20,0:24:65.50:0,65,633	1/1:1,12:13:32.95:271,33,0	1/1:7,17:24:50.92:419,51,0	1/1:4,21:25:59.86:487,60,0	1/1:0,7:7:17.98:148,18,0
chr10	65903067	.	GTTT	G	5419.94	PASS	AB=0.768;AC=42;AF=0.750;AN=56;BaseQRankSum=3.998;DP=523;FS=4.305;HRun=17;HaplotypeScore=94.5569;InbreedingCoeff=0.7742;MQ=78.06;MQ0=2;MQRankSum=-3.114;QD=13.09;ReadPosRankSum=6.220;VQSLOD=2.5661;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:42.14:0,42,659	1/1:2,7:9:17.98:183,18,0	0/1:35,0:22:18.55:19,0,187	0/0:25,0:13:18.87:0,19,175	0/0:27,0:34:85.41:0,85,1246	1/1:4,11:18:10.23:260,10,0	1/1:2,3:6:8.95:92,9,0	1/1:20,0:40:54.83:329,55,0	1/1:2,8:11:20.96:202,21,0	1/1:25,0:25:47.24:282,47,0	1/1:21,0:21:27.62:163,28,0	1/1:5,9:14:22.48:244,22,0	0/0:11,0:13:36.07:0,36,501	1/1:3,13:17:19.83:349,20,0	1/1:5,13:19:19.78:203,20,0	1/1:23,0:23:48.01:267,48,0	1/1:5,20:25:47.90:493,48,0	0/1:2,1:15:14.36:14,0,44	1/1:11,5:17:15.33:166,15,0	1/1:4,12:17:29.64:293,30,0	1/1:6,7:13:20.93:216,21,0	1/1:4,5:9:14.99:154,15,0	0/0:11,0:13:36.06:0,36,530	0/0:3,0:3:9.03:0,9,143	1/1:4,17:22:35.65:356,36,0	1/1:7,13:21:35.66:367,36,0	1/1:3,20:23:48:493,48,0	1/1:1,11:13:25.60:275,26,0
chr10	65903080	.	TTTTTA	T	2840.70	PASS	AB=0.972;AC=8;AF=0.143;AN=56;BaseQRankSum=0.827;DP=526;FS=6.589;HRun=0;HaplotypeScore=121.3769;InbreedingCoeff=0.7149;MQ=68.57;MQ0=5;MQRankSum=-3.727;QD=20.44;ReadPosRankSum=2.589;VQSLOD=3.1492;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:42.14:0,42,1133	0/0:10,0:10:22.90:0,23,192	0/1:36,0:15:7.21:7,0,353	0/0:29,0:13:26.93:0,27,359	0/0:32,0:32:96.30:0,96,2310	0/0:21,0:21:49.37:0,49,458	0/0:5,0:5:14.69:0,15,97	0/1:32,2:34:99:378,0,151	0/0:13,0:13:29.82:0,30,254	1/1:1,25:26:67.14:1067,67,0	1/1:3,19:22:52.83:651,53,0	0/0:14,0:14:38.47:0,38,295	0/0:14,0:14:42.14:0,42,951	0/0:17,0:17:47.47:0,47,373	0/0:18,0:18:38.74:0,39,316	1/1:1,20:21:50.96:890,51,0	0/0:22,0:22:53.45:0,53,368	0/0:16,0:16:36.09:0,36,525	0/0:12,0:12:21.68:0,22,200	0/0:21,0:21:34.69:0,35,478	0/0:7,0:7:20.83:0,21,146	0/0:6,0:6:17.87:0,18,128	0/0:15,0:15:45.14:0,45,1091	0/0:5,0:5:15.05:0,15,385	0/0:26,0:26:42.50:0,42,493	0/0:22,0:22:51.74:0,52,474	0/0:24,0:24:61.91:0,62,456	0/0:24,0:24:65.76:0,66,598
chr10	65903954	.	TACAC	T	3023.23	PASS	AB=0.910;AC=34;AF=0.654;AN=52;BaseQRankSum=9.239;DP=554;FS=2.021;HRun=0;HaplotypeScore=115.9384;InbreedingCoeff=0.5692;MQ=70.00;MQ0=7;MQRankSum=-5.395;QD=8.04;ReadPosRankSum=-0.937;VQSLOD=2.7222;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:29.74:0,30,458	1/1:5,0:5:9:81,9,0	./.	./.	0/0:14,0:16:26.81:0,27,508	1/1:13,0:13:11.03:85,11,0	1/1:17,0:16:6:52,6,0	0/0:19,0:18:0.63:0,1,28	1/1:9,14:23:23.74:375,24,0	1/1:7,4:12:14.46:191,14,0	1/1:5,11:16:27.05:390,27,0	1/1:23,0:23:20.99:185,21,0	0/0:16,0:16:15.05:0,15,323	1/1:22,0:22:26.60:222,27,0	1/1:31,0:31:20.95:177,21,0	0/1:24,30:55:0.34:725,0,0	1/1:31,0:31:11.99:106,12,0	0/0:19,0:18:30.10:0,30,695	1/1:16,0:16:8.28:76,8,0	1/1:13,0:13:18.01:170,18,0	1/1:27,0:27:9.88:81,10,0	0/1:14,0:13:18.18:22,0,18	0/0:10,0:11:29.82:0,30,520	0/0:26,0:26:48.14:0,48,1027	1/1:11,0:11:2.59:10,3,0	0/1:13,0:13:19.91:110,0,20	0/1:21,0:20:10.98:67,0,11	1/1:13,0:13:9:81,9,0
chr10	65903990	.	CACACACAT	C	2677.27	PASS	AB=0.993;AC=26;AF=0.464;AN=56;BaseQRankSum=10.301;DP=771;FS=7.362;HRun=0;HaplotypeScore=185.8383;InbreedingCoeff=0.6418;MQ=59.25;MQ0=17;MQRankSum=-3.482;QD=6.71;ReadPosRankSum=1.605;VQSLOD=2.0752;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:32:77.96:0,78,1575	1/1:5,1:6:8.98:137,9,0	0/0:33,0:10:20.61:0,21,302	0/0:34,0:12:16.86:0,17,204	0/0:21,0:21:53.92:0,54,1594	1/1:19,0:19:2.89:76,3,0	1/1:20,0:19:6:52,6,0	0/0:21,0:20:39.86:0,40,535	0/0:30,0:30:65.49:0,65,652	0/0:20,0:20:53.27:0,53,597	0/0:28,0:28:56.84:0,57,609	1/1:39,0:39:20.99:183,21,0	0/0:18,0:18:48.10:0,48,1354	1/1:23,0:23:26.33:271,26,0	0/1:32,1:33:1.24:208,0,1	0/0:53,0:53:93.04:0,93,1134	0/1:36,0:36:5.23:91,0,5	0/0:22,0:21:62.46:0,62,1739	1/1:3,16:19:47.89:462,48,0	1/1:23,0:23:3.73:115,4,0	1/1:51,0:50:10.82:83,11,0	0/1:23,0:22:59.89:60,0,60	0/0:23,0:23:57.07:0,57,1350	0/0:36,0:35:99:0,105,2920	1/1:15,0:15:2.67:19,3,0	1/1:36,0:36:5.98:597,6,0	0/1:33,0:33:49.35:63,0,49	1/1:22,1:23:23.51:462,24,0
chr10	65903992	.	CACACAT	C	5353.94	PASS	AB=0.537;AC=29;AF=0.518;AN=56;BaseQRankSum=7.735;DP=766;FS=4.850;HRun=0;HaplotypeScore=157.1656;InbreedingCoeff=0.8227;MQ=60.93;MQ0=17;MQRankSum=-3.765;QD=13.83;ReadPosRankSum=1.808;VQSLOD=3.8999;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:31:74.89:0,75,1152	1/1:2,4:6:9.03:194,9,0	0/0:34,0:11:23.64:0,24,279	0/0:36,0:14:22.61:0,23,213	0/0:21,0:21:53.92:0,54,1225	1/1:3,15:18:2.92:205,3,0	1/1:1,19:19:6.02:141,6,0	0/0:24,0:23:9.43:0,9,362	0/0:31,0:31:64.48:0,64,418	0/0:21,0:21:19.68:0,20,386	0/0:28,0:28:44.68:0,45,354	1/1:3,36:39:21.07:498,21,0	0/0:17,0:17:45.08:0,45,1009	1/1:3,18:21:26.61:603,27,0	1/1:4,29:33:20.90:469,21,0	0/0:53,0:53:52.37:0,52,619	1/1:5,29:35:11.80:284,12,0	0/0:24,0:23:65.38:0,65,1384	1/1:17,1:18:47.91:516,48,0	1/1:2,21:23:17.32:363,17,0	1/1:8,42:49:9.50:215,10,0	0/1:3,19:21:35.30:46,0,35	0/0:22,0:22:57.04:0,57,1015	0/0:36,0:35:99:0,102,2251	1/1:5,9:14:2.53:54,3,0	1/1:3,32:35:89.80:956,90,0	1/1:3,27:30:7.44:211,7,0	1/1:21,2:23:59.87:598,60,0
chr10	65904891	.	AT	A	1510	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=7.515;DP=349;FS=4.068;HRun=8;HaplotypeScore=37.8154;InbreedingCoeff=0.8453;MQ=73.61;MQ0=1;MQRankSum=0.217;QD=23.59;ReadPosRankSum=-2.736;VQSLOD=2.9135;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:69.19:0,69,810	0/0:4,0:4:12.04:0,12,145	0/0:8,0:7:11.21:0,11,135	0/0:9,0:5:8.99:0,9,81	0/0:13,0:13:30.09:0,30,362	0/0:12,0:12:36.10:0,36,423	0/0:15,0:15:36.11:0,36,434	1/1:5,30:35:90.10:856,90,0	0/0:13,0:13:30.09:0,30,362	1/1:0,14:14:42.07:406,42,0	1/1:0,8:8:24.04:232,24,0	0/0:8,0:8:24.05:0,24,267	0/0:5,0:5:12.04:0,12,145	0/0:1,0:1:3.01:0,3,36	0/0:9,0:9:27.08:0,27,317	1/1:1,6:7:18.03:174,18,0	0/0:31,0:31:66.78:0,67,928	0/0:4,0:18:40.25:0,40,205	0/0:21,0:21:57.17:0,57,688	0/0:6,0:6:18.06:0,18,217	0/0:5,0:5:12.02:0,12,133	0/0:2,0:2:3.01:0,3,36	0/0:3,0:3:9.03:0,9,109	0/0:10,0:10:30.08:0,30,351	0/0:16,0:16:42.13:0,42,507	0/0:20,1:21:34.21:0,34,694	0/0:18,0:18:51.14:0,51,604	0/0:12,0:12:27.08:0,27,325
chr10	65908384	.	CAG	C	11784.87	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=14.540;DP=607;FS=2.189;HRun=0;HaplotypeScore=71.0838;InbreedingCoeff=0.9997;MQ=82.20;MQ0=3;MQRankSum=-1.172;QD=35.28;ReadPosRankSum=3.227;VQSLOD=6.6349;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,108,1866	1/1:0,9:9:27.09:387,27,0	0/0:16,0:16:42.61:0,43,718	0/0:18,0:18:30.36:0,30,719	0/0:21,0:21:60.15:0,60,1033	1/1:1,28:29:78.26:1117,78,0	1/1:0,22:22:54.18:770,54,0	0/0:33,0:33:90.29:0,90,1568	0/0:16,0:16:48.15:0,48,848	0/0:15,0:15:45.12:0,45,765	0/0:13,0:13:39.12:0,39,673	1/1:2,24:26:54.18:773,54,0	0/0:20,0:20:57.20:0,57,1036	1/1:1,15:16:39.13:559,39,0	1/1:0,16:16:45.15:645,45,0	0/0:29,0:29:84.25:0,84,1471	1/1:3,36:39:93.31:1332,93,0	0/0:17,0:17:42.14:0,42,768	1/1:0,13:13:39.09:505,39,0	1/1:0,13:13:33.11:473,33,0	1/1:3,36:39:87.29:1238,87,0	1/1:3,16:18:48.12:664,48,0	0/0:16,0:16:42.10:0,42,734	0/0:20,0:20:60.21:0,60,1099	1/1:1,17:18:48.16:688,48,0	1/1:2,28:29:32.21:1089,32,0	1/1:0,19:19:51.17:730,51,0	1/1:1,25:25:57.19:816,57,0
chr10	65909468	.	T	TG	669.88	PASS	AB=0.856;AC=12;AF=0.214;AN=56;BaseQRankSum=-0.274;DP=520;FS=0.693;HRun=10;HaplotypeScore=71.4710;InbreedingCoeff=0.5278;MQ=74.58;MQ0=0;MQRankSum=0.373;QD=6.57;ReadPosRankSum=-1.242;VQSLOD=1.4412;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:27:55.95:0,56,449	0/0:7,0:8:17.01:0,17,129	0/0:20,0:21:16.83:0,17,130	0/1:14,0:13:22.98:23,0,96	0/0:23,0:23:38.58:0,39,314	0/0:18,0:18:49.94:0,50,394	0/0:27,0:30:57.91:0,58,452	0/1:9,3:12:12.65:73,0,13	1/1:4,11:15:27.07:288,27,0	0/1:7,5:12:15.59:55,0,16	1/1:3,7:10:9.02:96,9,0	0/0:22,0:23:34.89:0,35,273	0/0:23,0:23:38.82:0,39,313	0/0:21,0:22:49.96:0,50,399	0/0:28,0:28:71.91:0,72,591	1/1:9,7:16:27.05:275,27,0	0/0:22,0:23:43.94:0,44,350	1/1:4,0:12:2.88:15,3,0	0/0:14,0:15:22.99:0,23,178	0/0:16,0:16:35.79:0,36,282	0/0:15,0:15:26.91:0,27,221	0/1:9,1:11:8.95:9,0,130	0/0:10,0:11:20:0,20,154	0/0:28,0:30:55.93:0,56,448	0/0:14,0:14:17.96:0,18,148	0/0:31,0:33:57.97:0,58,454	0/0:21,0:23:54.98:0,55,427	0/0:14,0:14:26.43:0,26,221
chr10	65909930	.	ATTT	A	8120.11	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-1.760;DP=531;FS=1.574;HRun=11;HaplotypeScore=87.7243;InbreedingCoeff=0.9872;MQ=70.19;MQ0=0;MQRankSum=-5.228;QD=30.99;ReadPosRankSum=3.322;VQSLOD=4.5004;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:41:99:0,108,2122	1/1:1,3:4:9.03:118,9,0	0/0:11,0:10:13.94:0,14,328	0/0:12,0:12:21.54:0,22,376	0/0:20,0:20:54.17:0,54,1020	1/1:1,26:27:63.20:828,63,0	1/1:5,15:20:39.10:512,39,0	0/0:4,0:23:50.33:0,50,380	0/0:1,0:12:26.92:0,27,244	0/0:8,0:29:69.96:0,70,586	0/0:3,0:28:72.97:0,73,585	1/1:1,17:18:42.12:552,42,0	0/0:12,0:12:33.11:0,33,645	1/1:0,10:10:27.09:354,27,0	1/1:1,17:18:45.14:591,45,0	0/0:2,0:20:47.82:0,48,368	1/1:2,17:19:39.12:512,39,0	0/0:4,0:29:68.75:0,69,532	1/1:5,7:12:21.02:276,21,0	1/1:0,22:22:60.15:764,60,0	1/1:7,21:28:57.15:744,57,0	1/1:1,17:18:45.14:590,45,0	0/0:17,0:18:54.17:0,54,1014	0/0:12,0:12:30.10:0,30,606	1/1:0,18:18:48.15:623,48,0	1/1:3,23:26:67.08:867,67,0	1/1:2,13:15:39.11:512,39,0	1/1:0,7:7:21.07:276,21,0
chr10	65912386	.	T	TG	934.57	PASS	AC=10;AF=0.185;AN=54;BaseQRankSum=3.315;DP=468;FS=7.394;HRun=8;HaplotypeScore=54.3745;InbreedingCoeff=0.9917;MQ=77.09;MQ0=0;MQRankSum=-2.417;QD=11.40;ReadPosRankSum=-0.120;VQSLOD=1.8537;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:66:0,66,604	0/0:7,0:7:14.97:0,15,131	0/0:19,0:18:43.94:0,44,372	0/0:11,0:11:22.70:0,23,198	0/0:22,0:22:60.03:0,60,549	0/0:12,0:12:36:0,36,324	0/0:22,0:22:56.97:0,57,506	1/1:3,18:22:50.95:547,51,0	0/0:20,0:20:45.01:0,45,412	1/1:2,1:10:20.34:139,20,0	1/1:1,1:15:25.73:135,26,0	0/0:17,0:17:45.02:0,45,411	0/0:18,0:18:45.01:0,45,404	0/0:9,0:9:27.01:0,27,247	0/0:25,0:25:72.03:0,72,659	1/1:5,1:21:28.58:165,29,0	0/0:30,0:30:74.96:0,75,672	1/1:14,0:14:29.46:121,29,0	0/0:10,0:10:30.02:0,30,274	0/0:12,0:12:27:0,27,242	0/0:22,0:22:54.02:0,54,494	0/0:9,0:9:21.01:0,21,192	0/0:9,0:9:24.01:0,24,220	0/0:21,0:21:53.97:0,54,487	0/0:14,0:14:33:0,33,297	0/0:26,0:26:66.03:0,66,604	0/0:19,0:19:51.02:0,51,467	./.
chr10	65912393	.	G	GGA	848.94	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=3.108;DP=455;FS=3.243;HRun=0;HaplotypeScore=59.7642;InbreedingCoeff=0.7446;MQ=78.73;MQ0=0;MQRankSum=-2.608;QD=14.89;ReadPosRankSum=2.228;VQSLOD=3.4790;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:75.18:0,75,1005	0/0:7,0:7:15.04:0,15,200	0/0:20,0:19:32.35:0,32,624	0/0:12,0:12:35.44:0,35,365	0/0:21,0:21:63.19:0,63,887	0/0:13,0:13:39.10:0,39,524	0/0:21,0:21:63.17:0,63,852	0/0:27,0:27:53.12:0,53,289	0/0:17,0:17:48.15:0,48,678	1/1:8,0:8:9.85:95,10,0	1/1:15,0:15:8.33:147,8,0	0/0:15,0:15:45.15:0,45,650	0/0:15,0:15:45.15:0,45,643	0/0:9,0:9:27.09:0,27,391	0/0:25,0:25:75.24:0,75,1064	0/1:18,0:18:23.69:154,0,24	0/0:29,0:29:87.22:0,87,1159	1/1:1,15:16:33.11:592,33,0	0/0:14,0:14:39.09:0,39,510	0/0:9,0:9:27.08:0,27,363	0/0:20,0:20:60.18:0,60,834	0/0:7,0:7:21.07:0,21,303	0/0:9,0:9:27.07:0,27,371	0/0:20,0:20:54.18:0,54,776	0/0:12,0:12:36.10:0,36,478	0/0:27,0:27:78.14:0,78,1032	0/0:20,0:20:57.17:0,57,784	0/0:1,0:1:2.98:0,3,21
chr10	65912565	.	GGGGA	G	1647.43	PASS	AB=1.000;AC=9;AF=0.167;AN=54;BaseQRankSum=4.294;DP=328;FS=48.782;HRun=0;HaplotypeScore=59.4263;InbreedingCoeff=0.6367;MQ=73.79;MQ0=1;MQRankSum=-0.456;QD=25.35;ReadPosRankSum=4.073;VQSLOD=1.2738;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:32.03:0,32,402	0/0:2,0:2:5.98:0,6,46	0/0:14,0:12:14.92:0,15,255	0/1:6,0:6:13.96:14,0,177	0/0:5,0:5:8.91:0,9,63	0/0:7,0:7:12.91:0,13,210	0/0:21,0:21:48.05:0,48,572	1/1:2,21:23:56.66:671,57,0	0/0:11,0:11:16.48:0,16,139	1/1:2,10:12:26.11:390,26,0	1/1:1,3:4:2.52:18,3,0	0/0:11,0:11:21.43:0,21,269	0/0:8,0:8:15.02:0,15,238	0/0:7,0:7:12:0,12,143	0/0:13,0:13:33.03:0,33,501	1/1:8,12:20:43.91:705,44,0	0/0:18,0:18:35.97:0,36,474	0/0:26,0:26:45.73:0,46,175	0/0:9,0:9:16.76:0,17,176	0/0:3,0:3:3:0,3,26	0/0:38,0:38:79.13:0,79,1344	./.	0/0:5,0:5:7.55:0,8,88	0/0:18,0:18:37.64:0,38,673	0/0:9,0:9:17.94:0,18,142	0/0:12,0:12:15.01:0,15,147	0/0:5,0:5:3.48:0,3,66	0/0:4,0:4:3.01:0,3,76
chr10	65913471	.	A	AG	1572.85	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-9.793;DP=627;FS=0.612;HRun=1;HaplotypeScore=58.3727;InbreedingCoeff=0.9917;MQ=88.34;MQ0=0;MQRankSum=-0.036;QD=40.33;ReadPosRankSum=-5.062;VQSLOD=2.0631;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,144,1867	0/0:7,0:7:21.07:0,21,272	0/0:20,0:20:56.83:0,57,686	0/0:26,0:26:72.22:0,72,909	0/0:27,0:27:78.25:0,78,1013	0/0:21,0:21:63.20:0,63,818	0/0:24,0:24:69.22:0,69,895	1/1:1,38:39:99:1668,114,0	0/0:12,0:12:36.12:0,36,467	0/0:16,0:16:48.16:0,48,623	0/0:9,0:9:27.09:0,27,350	0/0:24,0:24:72.17:0,72,900	0/0:25,0:25:75.24:0,75,972	0/0:12,0:12:36.12:0,36,466	0/0:28,0:28:84.26:0,84,1076	0/0:42,0:42:99:0,120,1530	0/0:25,0:25:69.22:0,69,895	0/0:18,0:18:51.17:0,51,662	0/0:25,0:25:75.23:0,75,950	0/0:25,0:25:75.23:0,75,958	0/0:44,0:44:99:0,129,1660	0/0:9,0:9:27.07:0,27,336	0/0:15,0:15:45.15:0,45,584	0/0:15,0:15:45.15:0,45,583	0/0:21,0:20:54.14:0,54,671	0/0:16,0:16:48.16:0,48,622	0/0:26,0:26:78.24:0,78,997	0/0:8,0:8:24.08:0,24,311
chr10	65913606	.	GA	G	2922.58	PASS	AB=0.797;AC=13;AF=0.232;AN=56;BaseQRankSum=4.772;DP=548;FS=0.763;HRun=11;HaplotypeScore=84.5806;InbreedingCoeff=0.6949;MQ=70.74;MQ0=1;MQRankSum=-4.566;QD=16.24;ReadPosRankSum=-1.047;VQSLOD=3.9007;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:48.08:0,48,499	0/0:13,1:14:11.41:0,11,314	0/0:12,0:9:14.75:0,15,139	0/1:15,0:11:4.37:4,0,6	0/0:18,1:19:26.48:0,26,480	0/0:16,1:18:17.25:0,17,353	0/0:11,0:12:24.06:0,24,256	1/1:9,22:31:74.90:614,75,0	1/1:4,18:22:53.93:443,54,0	1/1:9,22:32:67.93:547,68,0	1/1:3,16:19:50.94:418,51,0	0/0:16,1:17:8.46:0,8,295	0/0:18,0:18:45.08:0,45,464	0/0:14,0:14:11.42:0,11,276	0/0:21,1:21:29.50:0,29,512	1/1:6,32:38:99:861,105,0	0/0:27,0:27:72.13:0,72,749	0/1:5,11:16:57.01:207,0,57	0/0:13,1:15:17.31:0,17,373	0/0:19,1:22:25.49:0,25,495	0/0:9,0:9:18.05:0,18,192	0/0:21,1:23:29.33:0,29,499	0/0:15,1:17:17.31:0,17,371	0/0:12,1:13:5.41:0,5,248	0/0:26,0:26:57.14:0,57,602	0/0:22,2:24:16.87:0,17,578	0/0:21,2:23:10.85:0,11,520	0/1:5,1:6:6.58:7,0,142
chr10	65913632	.	CT	C	8588.88	PASS	AB=0.676;AC=40;AF=0.714;AN=56;BaseQRankSum=5.400;DP=587;FS=0.818;HRun=10;HaplotypeScore=79.3997;InbreedingCoeff=0.5465;MQ=73.14;MQ0=1;MQRankSum=-3.924;QD=17.46;ReadPosRankSum=2.975;VQSLOD=5.5474;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,1:28:39.92:0,40,632	0/1:3,9:13:1.12:208,0,1	0/1:23,3:23:29.25:29,0,234	0/0:12,0:8:17.36:0,17,142	0/1:21,3:25:18.97:19,0,518	1/1:2,14:16:35.98:312,36,0	1/1:2,13:15:10.28:237,10,0	1/1:12,16:29:55.97:468,56,0	1/1:3,14:18:50.03:422,50,0	1/1:6,22:28:65.95:573,66,0	1/1:6,13:19:41.96:360,42,0	1/1:3,16:20:47.02:397,47,0	0/0:24,0:24:63.14:0,63,674	1/1:0,14:14:29.99:260,30,0	1/1:3,22:26:62.01:527,62,0	1/1:6,33:39:62.76:774,63,0	1/1:4,21:25:56.98:495,57,0	0/1:4,8:12:6.18:181,0,6	0/1:5,14:19:6.85:317,0,7	1/1:3,26:29:48.94:598,49,0	0/1:2,9:11:3.20:204,0,3	1/1:1,22:23:59.97:521,60,0	0/0:18,1:19:25.08:0,25,498	0/0:12,0:12:30.08:0,30,332	1/1:4,21:25:53.98:469,54,0	1/1:5,14:20:47.01:396,47,0	1/1:3,23:26:65.97:569,66,0	1/1:0,10:13:33.11:252,33,0
chr10	65914039	.	AGTGT	A	5138.38	PASS	AB=0.905;AC=28;AF=0.519;AN=54;BaseQRankSum=-5.939;DP=612;FS=7.114;HRun=0;HaplotypeScore=127.7537;InbreedingCoeff=0.6618;MQ=68.01;MQ0=16;MQRankSum=3.503;QD=15.91;ReadPosRankSum=4.642;VQSLOD=4.1277;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:35:49.01:0,49,699	1/1:9,0:9:15.87:213,16,0	0/0:32,0:17:15.04:0,15,238	0/0:41,0:25:21.89:0,22,335	0/0:14,0:18:24.05:0,24,344	1/1:18,0:16:27.06:371,27,0	1/1:25,0:24:6.46:348,6,0	0/1:28,0:28:48.27:48,0,119	0/0:22,0:22:35.67:0,36,516	0/0:20,0:18:30.10:0,30,419	./.	1/1:13,0:13:15.05:232,15,0	0/1:24,0:22:42.26:42,0,436	1/1:13,0:13:21.07:309,21,0	1/1:30,0:30:35.27:483,35,0	0/0:6,0:30:0.81:0,1,1	0/1:21,0:20:16.07:465,0,16	0/0:22,0:22:45.15:0,45,715	1/1:9,7:16:18.04:232,18,0	0/0:4,8:12:0:0,0,0	1/1:35,0:33:30.63:728,31,0	0/1:5,8:13:0.37:0,0,0	0/0:14,0:14:8.98:0,9,142	0/0:35,0:31:39.16:0,39,954	1/1:14,0:14:24.06:331,24,0	1/1:23,0:22:24.41:260,24,0	1/1:29,0:31:52.42:941,52,0	1/1:10,0:9:9.03:136,9,0
chr10	65914065	.	TGTGTGA	T	4837.28	PASS	AB=0.969;AC=21;AF=0.389;AN=54;BaseQRankSum=-5.351;DP=560;FS=23.296;HRun=0;HaplotypeScore=124.8795;InbreedingCoeff=-0.0429;MQ=51.48;MQ0=18;MQRankSum=4.886;QD=14.70;ReadPosRankSum=2.454;VQSLOD=2.6691;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:36:34.17:0,34,767	1/1:12,0:12:2.99:197,3,0	0/0:12,0:5:15.04:0,15,238	0/0:21,0:11:21.89:0,22,335	0/0:19,0:18:24.07:0,24,370	0/1:17,0:15:32.98:329,0,33	0/1:31,0:29:99:327,0,105	0/1:14,0:13:48.27:48,0,119	0/0:25,0:25:44.98:0,45,700	0/0:15,0:13:33.58:0,34,461	./.	0/1:12,0:11:6.89:214,0,7	0/1:22,0:20:88.69:89,0,498	0/1:22,0:22:64.02:300,0,64	0/1:32,0:32:64.21:350,0,64	0/0:24,0:24:8.88:0,9,60	0/1:22,0:21:99:466,0,147	0/0:22,0:22:39.48:0,39,910	1/1:12,0:12:18.04:232,18,0	0/0:11,0:10:2.74:0,3,12	0/1:33,0:31:85.32:639,0,85	1/1:14,0:14:2.66:21,3,0	0/1:17,0:17:28.74:29,0,167	0/0:39,0:35:20.52:0,21,1119	1/1:13,0:13:24.02:306,24,0	0/1:5,11:15:54.28:295,0,54	0/1:34,0:33:1.59:874,0,2	0/1:6,0:5:8.96:121,0,9
chr10	65915130	.	AC	A	938.70	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.508;DP=553;FS=5.045;HRun=8;HaplotypeScore=69.8583;InbreedingCoeff=0.8896;MQ=69.17;MQ0=0;MQRankSum=-1.177;QD=16.18;ReadPosRankSum=-0.728;VQSLOD=3.6168;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:66.17:0,66,770	0/0:4,0:4:9.02:0,9,99	0/0:9,0:10:19.93:0,20,245	0/0:8,0:8:17.23:0,17,167	0/0:11,0:11:27.08:0,27,326	0/0:18,0:17:54.15:0,54,640	0/0:23,0:23:60.16:0,60,702	1/1:12,10:22:29.97:278,30,0	0/0:17,0:17:48.12:0,48,558	0/0:16,0:16:36.11:0,36,433	0/0:11,0:11:22.31:0,22,250	0/0:34,0:34:90.25:0,90,1063	0/0:26,0:26:72.22:0,72,867	0/0:23,0:23:63.18:0,63,748	0/0:29,0:29:81.25:0,81,977	0/0:24,0:24:51.15:0,51,605	0/0:28,1:29:46.25:0,46,841	1/1:2,34:36:81.13:782,81,0	0/0:19,0:19:42.12:0,42,492	0/0:13,0:13:29.96:0,30,341	0/0:42,0:42:99:0,111,1290	0/0:7,0:7:21.06:0,21,253	0/0:15,1:16:4.14:0,4,313	0/0:38,0:38:99:0,102,1202	0/0:12,0:12:33.10:0,33,398	0/0:17,0:17:39.12:0,39,470	0/0:15,0:15:42.13:0,42,507	0/0:7,0:7:18.03:0,18,188
chr10	65915171	.	GTTATTGAAGCAGTTCACGTGGCCCACACA	G	5050.43	PASS	AB=0.952;AC=7;AF=0.125;AN=56;BaseQRankSum=7.889;DP=591;FS=0.815;HRun=0;HaplotypeScore=423.2573;InbreedingCoeff=0.8098;MQ=78.23;MQ0=0;MQRankSum=-7.922;QD=91.83;ReadPosRankSum=3.252;VQSLOD=3.1247;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,114,13844	0/0:4,0:4:12.04:0,12,1392	0/0:18,0:18:45.15:0,45,2804	0/0:11,0:11:30.07:0,30,1658	0/0:10,0:10:27.09:0,27,3159	0/0:24,0:24:69.23:0,69,8553	0/0:34,0:34:99:0,102,11292	0/0:12,0:12:30.10:0,30,2934	0/0:16,0:16:48.16:0,48,6102	1/1:6,7:13:21.07:1621,21,0	1/1:3,5:8:12.04:926,12,0	0/0:40,0:40:99:0,114,13168	0/0:24,0:24:69.24:0,69,6843	0/0:25,0:25:69.24:0,69,8345	0/0:22,0:22:66.23:0,66,7770	1/1:2,12:14:30.10:2316,30,0	0/0:41,0:41:99:0,120,13740	0/0:41,0:41:99:0,114,13127	0/0:16,0:16:45.15:0,45,4448	0/0:12,0:12:30.10:0,30,3472	0/0:50,0:50:99:0,144,16781	0/0:8,0:8:21.07:0,21,2516	0/0:16,0:16:48.15:0,48,5817	0/0:36,0:36:99:0,99,12198	0/0:19,0:19:54.19:0,54,6992	0/1:19,1:20:99:186,0,5121	0/0:12,0:12:36.12:0,36,3836	0/0:5,0:5:15.05:0,15,2029
chr10	65916519	.	GCA	G	509.15	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.553;DP=676;FS=11.374;HRun=0;HaplotypeScore=80.4992;InbreedingCoeff=0.8330;MQ=68.09;MQ0=0;MQRankSum=-0.063;QD=18.86;ReadPosRankSum=-3.325;VQSLOD=2.3061;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:84.23:0,84,1323	0/0:15,0:15:36.09:0,36,572	0/0:34,0:33:44.78:0,45,1052	0/0:27,0:23:46.07:0,46,785	0/0:26,0:26:22.10:0,22,915	0/0:17,0:17:3.94:0,4,570	0/0:24,0:24:60.16:0,60,920	1/1:10,17:27:51.10:604,51,0	0/0:25,0:25:69.24:0,69,1131	0/0:9,0:9:21.07:0,21,346	0/0:9,0:9:18.06:0,18,301	0/0:33,0:33:90.26:0,90,1412	0/0:20,0:20:51.17:0,51,846	0/0:33,1:34:87.30:0,87,1436	0/0:35,0:35:93.29:0,93,1497	0/0:20,0:20:60.12:0,60,944	0/0:41,0:41:99:0,99,1656	0/0:24,0:24:63.22:0,63,1043	0/0:23,0:23:60.20:0,60,981	0/0:13,0:13:24.08:0,24,401	0/0:35,0:35:90.28:0,90,1454	0/0:17,0:17:42.11:0,42,647	0/0:13,0:13:33.11:0,33,551	0/0:34,0:34:93.29:0,93,1495	0/0:25,0:25:63.22:0,63,1046	0/0:24,0:24:66.23:0,66,1098	0/0:28,0:27:75.24:0,75,1223	0/0:4,0:4:12.04:0,12,200
chr10	65916628	.	A	AC	6514.46	PASS	AB=0.845;AC=39;AF=0.696;AN=56;BaseQRankSum=-7.062;DP=530;FS=2.446;HRun=8;HaplotypeScore=68.9527;InbreedingCoeff=0.6807;MQ=84.84;MQ0=0;MQRankSum=-1.816;QD=16.29;ReadPosRankSum=-1.877;VQSLOD=4.6655;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:5,20:26:20.68:492,21,0	1/1:1,8:9:12.04:138,12,0	0/0:16,0:16:29.74:0,30,252	0/1:23,0:23:9.76:10,0,181	0/0:19,0:19:45.02:0,45,411	1/1:5,14:19:11.65:388,12,0	1/1:7,21:28:51.15:589,51,0	1/1:3,0:15:11.52:68,12,0	0/0:20,0:20:60.03:0,60,547	1/1:5,0:5:0.94:2,1,0	0/0:4,0:4:1.88:0,2,19	1/1:1,2:21:17.19:127,17,0	0/0:20,0:20:54.02:0,54,491	1/1:4,2:23:14.20:72,14,0	1/1:3,20:22:50.64:563,51,0	1/1:9,0:9:3:27,3,0	1/1:6,18:25:70.02:756,70,0	0/1:5,0:5:0:0,0,0	1/1:3,15:18:45.13:516,45,0	1/1:2,14:16:36.01:379,36,0	1/1:4,30:34:32.71:630,33,0	1/1:1,7:9:3.48:36,3,0	0/0:17,0:17:42.01:0,42,379	0/0:34,0:34:87.03:0,87,795	1/1:9,11:20:24.50:263,25,0	1/1:5,16:21:48.10:527,48,0	0/1:4,27:29:16.15:579,0,16	1/1:8,12:20:8.64:353,9,0
chr10	65916873	.	CAAAACAAA	C	399.32	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=4.772;DP=604;FS=1.413;HRun=0;HaplotypeScore=146.2440;InbreedingCoeff=0.6125;MQ=63.86;MQ0=9;MQRankSum=-2.683;QD=19.02;ReadPosRankSum=-1.420;VQSLOD=2.9927;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:42:99:0,102,3647	0/0:6,0:6:15.05:0,15,521	0/1:13,0:7:35.93:36,0,347	0/0:14,0:9:12.27:0,12,333	0/0:22,0:22:63.17:0,63,2102	0/0:18,0:18:45.63:0,46,1818	0/0:22,0:21:57.20:0,57,2306	0/0:28,0:27:72.25:0,72,2702	1/1:2,6:8:18.06:467,18,0	0/0:14,0:14:40.69:0,41,1491	0/0:11,0:11:33.11:0,33,1395	0/0:22,0:22:60.21:0,60,2507	0/0:20,0:20:57.20:0,57,2190	0/0:26,0:26:63.22:0,63,2385	0/0:25,0:25:66.23:0,66,2552	0/0:19,0:19:54.19:0,54,2232	0/0:62,0:60:99:0,153,6079	0/0:44,0:44:99:0,126,4838	0/0:16,0:16:39.13:0,39,1488	0/0:13,0:12:24.08:0,24,732	0/0:34,0:32:93.31:0,93,3436	0/0:20,0:20:51.18:0,51,2098	0/0:15,0:15:34:0,34,1215	0/0:27,0:25:60.21:0,60,2338	0/0:21,0:20:54.19:0,54,2062	0/0:18,0:18:39.13:0,39,1460	0/0:14,0:14:39.56:0,40,1253	0/0:7,0:7:15.05:0,15,530
chr10	65918646	.	CT	C	1111.13	PASS	AB=0.944;AC=4;AF=0.071;AN=56;BaseQRankSum=5.991;DP=588;FS=3.247;HRun=3;HaplotypeScore=57.0385;InbreedingCoeff=0.4736;MQ=71.15;MQ0=0;MQRankSum=1.278;QD=24.69;ReadPosRankSum=-3.000;VQSLOD=2.2729;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,105,1638	0/0:13,0:13:36.59:0,37,558	0/1:7,0:7:18.37:18,0,91	0/1:6,1:8:11.14:11,0,108	0/0:11,0:11:30.10:0,30,477	0/0:19,0:19:54.18:0,54,857	0/0:31,0:31:93.32:0,93,1482	1/1:0,30:30:87.28:1194,87,0	0/0:20,0:20:60.20:0,60,959	0/0:21,0:21:57.19:0,57,891	0/0:11,0:11:33.11:0,33,527	0/0:29,0:29:87.27:0,87,1343	0/0:12,0:12:36.11:0,36,553	0/0:24,0:24:72.25:0,72,1147	0/0:18,0:18:54.18:0,54,860	0/0:23,0:23:69.24:0,69,1099	0/0:43,0:43:99:0,129,2013	0/0:31,0:31:90.31:0,90,1431	0/0:22,0:22:66.22:0,66,1033	0/0:12,0:12:33.11:0,33,525	0/0:52,0:52:99:0,157,2441	0/0:19,0:19:54.18:0,54,861	0/0:11,0:11:33.11:0,33,507	0/0:29,0:29:78.22:0,78,1211	0/0:11,0:11:33.11:0,33,521	0/0:19,0:19:57.17:0,57,865	0/0:14,0:14:42.13:0,42,646	0/0:11,0:11:33.11:0,33,527
chr10	65919467	.	TATTATATAGC	T	2020.22	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.369;DP=558;FS=0.000;HRun=0;HaplotypeScore=162.9156;InbreedingCoeff=0.9984;MQ=67.34;MQ0=0;MQRankSum=-5.741;QD=91.83;ReadPosRankSum=-1.581;VQSLOD=3.5217;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,99,5072	0/0:9,0:9:27.09:0,27,1442	0/0:20,0:20:54.19:0,54,2546	0/0:19,0:16:38.49:0,38,1509	0/0:27,0:27:81.28:0,81,4425	0/0:17,0:17:51.18:0,51,2787	0/0:18,0:18:54.17:0,54,2811	1/1:0,22:21:63.22:2115,63,0	0/0:20,0:20:60.21:0,60,3284	0/0:20,0:20:60.21:0,60,3120	0/0:17,0:17:51.18:0,51,2670	0/0:20,0:20:60.21:0,60,3094	0/0:22,0:22:66.23:0,66,3461	0/0:15,0:15:45.15:0,45,2434	0/0:22,0:22:66.23:0,66,3522	0/0:23,0:23:69.24:0,69,3637	0/0:23,0:23:69.24:0,69,3702	0/0:20,0:20:57.20:0,57,3128	0/0:17,0:17:51.18:0,51,2547	0/0:25,0:25:75.26:0,75,3851	0/0:10,0:10:30.10:0,30,1624	0/0:25,0:25:75.26:0,75,3752	0/0:21,0:21:63.22:0,63,3152	0/0:19,0:19:57.16:0,57,2703	0/0:19,0:19:57.20:0,57,2953	0/0:18,0:18:54.19:0,54,2845	0/0:21,0:21:63.22:0,63,3352	0/0:15,0:15:45.15:0,45,2373
chr10	65920305	.	GCT	G	293.12	PASS	AB=0.993;AC=15;AF=0.341;AN=44;BaseQRankSum=-2.280;DP=594;FS=1.537;HRun=0;HaplotypeScore=133.4707;InbreedingCoeff=-0.0403;MQ=64.58;MQ0=18;MQRankSum=2.434;QD=1.03;ReadPosRankSum=0.814;VQSLOD=2.4181;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:21,0:20:16.75:17,0,62	0/0:7,0:7:11.77:0,12,85	./.	./.	1/1:16,0:16:2.98:22,3,0	0/0:16,0:15:5.92:0,6,39	0/0:34,0:30:2.94:0,3,18	0/0:33,0:32:9.78:0,10,61	0/1:14,0:13:17.36:17,0,19	1/1:13,0:17:11.59:86,12,0	./.	0/0:19,0:19:5.98:0,6,48	0/1:22,0:22:3.97:4,0,72	0/0:24,0:22:11.98:0,12,97	0/0:29,0:28:2.99:0,3,24	1/1:22,0:21:11.92:89,12,0	0/1:29,0:28:17.11:17,0,101	0/1:30,0:27:74.12:74,0,136	./.	./.	0/1:46,0:45:18.20:18,0,18	0/1:17,0:17:8.39:8,0,79	./.	0/1:32,1:32:17.10:62,0,17	0/0:13,0:12:8.93:0,9,66	0/1:16,0:15:17.56:18,0,37	0/0:9,0:9:11.94:0,12,91	0/0:18,0:16:8.19:0,8,52
chr10	65920354	.	CTGTGTGTGTGTGTGTGTGTGTGTG	C	2613.28	PASS	AB=0.881;AC=13;AF=0.250;AN=52;BaseQRankSum=6.470;DP=537;FS=3.609;HRun=0;HaplotypeScore=257.7553;InbreedingCoeff=0.3745;MQ=38.05;MQ0=52;MQRankSum=-3.475;QD=15.11;ReadPosRankSum=1.053;VQSLOD=2.3945;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:28:30.10:0,30,1695	0/0:6,0:6:0:0,0,0	./.	./.	0/0:14,0:14:8.86:0,9,547	0/0:9,0:3:2.97:0,3,20	0/0:30,3:25:5.07:0,5,10	0/0:24,0:22:45.15:0,45,1072	0/0:13,0:12:16.30:0,16,1083	0/0:23,0:21:39.07:0,39,2798	0/0:10,0:10:6.02:0,6,537	1/1:14,4:17:2.52:182,3,0	0/0:23,0:22:48.16:0,48,3733	1/1:20,7:25:1.81:182,2,0	0/0:15,4:19:3.95:0,4,34	0/0:26,0:24:22.10:0,22,1653	0/1:24,5:25:38.21:614,0,38	0/1:28,0:28:99:492,0,134	1/1:19,3:18:8.52:396,9,0	0/0:13,5:16:0.94:0,1,3	0/0:24,0:22:4.73:0,5,17	0/0:16,5:20:0.94:0,1,1	0/0:10,0:10:6.49:0,6,503	0/0:31,0:26:32.86:0,33,2527	0/0:17,5:22:2.36:0,2,4	1/1:15,3:16:8.68:398,9,0	0/1:15,1:15:12.53:177,0,13	1/1:6,1:6:3.85:313,4,0
chr10	65921017	.	CT	C	2533.59	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.871;DP=702;FS=1.574;HRun=1;HaplotypeScore=67.1340;InbreedingCoeff=0.9975;MQ=88.40;MQ0=0;MQRankSum=0.731;QD=35.68;ReadPosRankSum=1.730;VQSLOD=3.9544;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,138,2165	0/0:10,0:10:30.10:0,30,480	0/0:28,0:28:84.27:0,84,1305	0/0:23,0:23:69.16:0,69,1036	0/0:35,0:35:99:0,102,1605	0/0:19,0:19:57.19:0,57,911	0/0:27,0:27:81.28:0,81,1293	0/0:29,0:29:84.25:0,84,1243	0/0:26,0:26:78.27:0,78,1247	1/1:0,31:31:93.27:1250,93,0	1/1:0,15:15:36.12:504,36,0	0/0:24,0:24:72.25:0,72,1151	0/0:25,0:25:75.26:0,75,1197	0/0:21,0:21:63.21:0,63,1005	0/0:41,0:41:99:0,123,1942	1/1:0,25:25:66.22:923,66,0	0/0:36,0:36:99:0,108,1696	0/0:11,0:11:33.10:0,33,499	0/0:25,0:25:72.25:0,72,1146	0/0:21,0:21:63.21:0,63,989	0/0:40,0:40:99:0,114,1787	0/0:23,0:23:66.19:0,66,1003	0/0:22,0:22:63.21:0,63,992	0/0:20,0:20:60.19:0,60,935	0/0:23,0:23:69.24:0,69,1097	0/0:21,1:22:24.25:0,24,965	0/0:26,0:25:78.25:0,78,1220	0/0:7,0:7:21.07:0,21,328
chr10	65923836	.	T	TCA	3208.81	PASS	AB=0.751;AC=28;AF=0.538;AN=52;BaseQRankSum=-1.635;DP=730;FS=2.681;HRun=0;HaplotypeScore=112.3810;InbreedingCoeff=-0.0891;MQ=68.91;MQ0=19;MQRankSum=-2.106;QD=6.12;ReadPosRankSum=0.339;VQSLOD=3.2685;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:35:29.71:0,30,275	0/1:10,5:14:47.47:149,0,47	./.	0/1:59,0:24:0:0,0,0	0/0:24,0:26:23.54:0,24,196	0/1:19,12:34:73.71:200,0,74	0/1:15,6:23:55.51:200,0,56	./.	0/1:10,10:21:8.65:289,0,9	1/1:21,0:21:15.68:118,16,0	1/1:11,0:11:6.01:70,6,0	0/1:9,10:21:31.84:119,0,32	0/0:13,0:15:20.89:0,21,210	1/1:12,7:22:3.94:208,4,0	0/1:17,12:31:6.05:476,0,6	1/1:11,1:29:35.78:335,36,0	0/1:16,6:23:99:113,0,110	1/1:21,0:34:27:248,27,0	1/1:18,0:17:6.48:73,6,0	0/1:20,3:23:26.73:39,0,27	0/1:24,10:36:20.69:122,0,21	0/1:19,8:28:20.89:91,0,21	0/0:4,0:7:5.85:0,6,47	0/0:40,0:41:62.99:0,63,661	0/1:14,3:17:15.29:74,0,15	1/1:16,0:16:6.02:89,6,0	0/1:15,10:28:52.38:242,0,52	0/1:4,7:12:42:119,0,42
chr10	65925702	.	TGAGAGA	T	400.73	PASS	AB=0.952;AC=21;AF=0.438;AN=48;BaseQRankSum=0.937;DP=305;FS=4.559;HRun=0;HaplotypeScore=63.5543;InbreedingCoeff=0.0856;MQ=38.10;MQ0=20;MQRankSum=-1.401;QD=3.23;ReadPosRankSum=0.255;VQSLOD=1.2826;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,1:30:11.63:0,12,520	0/1:6,0:6:0.07:0,0,0	./.	./.	0/1:8,0:9:7.59:8,0,33	0/0:13,0:13:8.73:0,9,157	0/0:12,0:11:11.70:0,12,184	./.	0/0:18,0:14:5.80:0,6,119	1/1:7,1:6:6.02:96,6,0	./.	0/0:6,0:5:9.02:0,9,144	0/1:14,0:14:20.89:21,0,315	1/1:7,0:5:3.86:23,4,0	0/1:12,0:12:15.26:15,0,95	1/1:3,0:4:3.01:54,3,0	0/1:8,0:7:5.13:5,0,158	1/1:3,0:4:3.01:42,3,0	0/0:10,0:10:0:0,0,0	1/1:4,0:2:3.01:57,3,0	0/1:8,0:7:21.82:50,0,22	0/0:7,0:6:0.47:0,0,1	0/1:15,0:17:2.50:3,0,55	0/0:19,0:19:12.04:0,12,306	0/0:5,0:5:3.01:0,3,76	0/1:8,0:6:29.80:54,0,30	0/1:6,1:6:7.34:49,0,7	1/1:2,0:2:3.01:60,3,0
chr10	65928012	.	A	AGGCT	1266.65	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-4.428;DP=614;FS=0.915;HRun=0;HaplotypeScore=106.5644;InbreedingCoeff=0.8452;MQ=67.79;MQ0=0;MQRankSum=-0.954;QD=26.39;ReadPosRankSum=-0.357;VQSLOD=3.2228;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:38.41:0,38,618	0/0:9,0:9:15.03:0,15,211	0/0:11,0:11:18.06:0,18,262	0/0:15,0:15:21.07:0,21,333	0/0:22,0:22:39.13:0,39,637	0/0:13,0:13:18.06:0,18,291	0/0:37,0:37:78.24:0,78,1225	0/0:19,0:19:21.07:0,21,337	0/0:23,0:23:48.15:0,48,754	1/1:18,5:23:18.06:415,18,0	1/1:4,2:6:6.02:146,6,0	0/0:25,0:25:57.19:0,57,928	0/0:32,0:32:48.16:0,48,764	0/0:30,0:30:42.14:0,42,677	0/0:15,0:15:30.10:0,30,485	1/1:9,10:19:36.12:839,36,0	0/0:38,0:38:81.28:0,81,1308	0/0:26,0:26:60.20:0,60,971	0/0:12,0:12:6.02:0,6,96	0/0:14,0:14:21.07:0,21,343	0/0:57,0:57:84.27:0,84,1321	0/0:10,0:10:3:0,3,49	0/0:11,0:11:15.05:0,15,239	0/0:40,0:40:90.20:0,90,1377	0/0:17,0:17:27.09:0,27,439	0/0:22,0:22:18.05:0,18,294	0/0:18,0:18:36.12:0,36,584	0/0:13,0:13:33.11:0,33,535
chr10	65928861	.	GTTTGCTGACCAAGGGTC	G	528.66	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.228;DP=622;FS=0.000;HRun=0;HaplotypeScore=274.6889;InbreedingCoeff=0.9507;MQ=85.29;MQ0=0;MQRankSum=-3.437;QD=75.52;ReadPosRankSum=0.745;VQSLOD=2.7016;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,117,9691	0/0:5,0:5:15.05:0,15,1260	0/0:22,0:22:63.19:0,63,3498	0/0:20,0:20:56.68:0,57,3174	0/0:11,0:11:30.10:0,30,2466	0/0:20,0:20:60.21:0,60,4563	0/0:28,0:28:84.27:0,84,6349	0/0:33,0:33:99:0,99,7087	0/0:17,0:17:51.18:0,51,3907	0/0:32,0:32:93.32:0,93,7151	0/0:17,0:17:48.16:0,48,3829	0/0:25,0:25:75.26:0,75,6248	0/0:26,0:26:78.27:0,78,6003	0/0:23,0:23:69.24:0,69,5271	0/0:35,0:35:99:0,105,8270	0/0:32,0:32:96.33:0,96,7666	0/0:28,0:29:87.26:0,87,6734	1/1:0,7:7:12.04:615,12,0	0/0:17,0:17:51.17:0,51,3449	0/0:17,0:17:51.18:0,51,3862	0/0:42,0:42:99:0,126,10381	0/0:24,0:24:72.25:0,72,5478	0/0:10,0:10:30.10:0,30,2559	0/0:20,0:20:60.21:0,60,4533	0/0:9,0:9:27.09:0,27,2055	0/0:33,0:33:99:0,99,7814	0/0:19,0:19:57.20:0,57,4153	0/0:10,0:10:30.10:0,30,2503
chr10	65929277	.	ATGGGGCTGGGGC	A	310.94	PASS	AC=6;AF=0.429;AN=14;BaseQRankSum=1.447;DP=144;FS=2.808;HRun=0;HaplotypeScore=53.2025;MQ=92.62;MQ0=0;MQRankSum=-0.633;QD=18.29;ReadPosRankSum=0.365;VQSLOD=1.7572;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	./.	./.	./.	./.	0/0:5,0:5:6.02:0,6,271	./.	./.	1/1:2,3:5:6.02:205,6,0	./.	./.	1/1:6,0:6:3.01:86,3,0	./.	./.	0/0:5,0:5:3.01:0,3,137	0/0:11,0:11:0.89:0,1,2	./.	./.	./.	./.	0/0:6,0:6:6.02:0,6,349	./.	./.	1/1:5,1:6:3.01:102,3,0	./.
chr10	65930879	.	TTCTCG	T	2265.89	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.100;DP=644;FS=9.682;HRun=0;HaplotypeScore=117.3117;InbreedingCoeff=0.9978;MQ=84.81;MQ0=0;MQRankSum=-5.980;QD=47.21;ReadPosRankSum=-2.880;VQSLOD=2.4266;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,114,3408	0/0:7,0:7:21.07:0,21,630	0/0:20,0:20:47.27:0,47,1361	0/0:22,0:22:42.68:0,43,1351	0/0:28,0:28:78.21:0,78,2163	0/0:25,0:25:72.22:0,72,2079	0/0:27,0:27:78.22:0,78,2172	1/1:4,28:32:78.24:1564,78,0	0/0:17,0:17:51.15:0,51,1389	0/0:24,0:24:72.25:0,72,2161	0/0:15,0:15:45.15:0,45,1384	0/0:19,0:19:54.17:0,54,1510	0/0:25,0:25:75.26:0,75,2307	0/0:18,0:18:54.17:0,54,1579	0/0:38,0:38:99:0,108,3292	0/0:28,0:28:81.26:0,81,2426	0/0:35,0:35:99:0,102,3050	1/1:0,16:16:39.13:823,39,0	0/0:30,0:30:90.29:0,90,2389	0/0:19,0:19:51.18:0,51,1539	0/0:38,0:38:99:0,114,3385	0/0:17,0:17:51.18:0,51,1557	0/0:18,0:18:54.19:0,54,1653	0/0:21,0:21:63.22:0,63,1903	0/0:18,0:18:48.64:0,49,1488	0/0:20,0:20:60.20:0,60,1738	0/0:14,0:14:42.13:0,42,1218	0/0:15,0:15:42.14:0,42,1289
chr10	65931215	.	G	GA	2913.32	PASS	AB=0.784;AC=31;AF=0.554;AN=56;BaseQRankSum=-6.132;DP=477;FS=0.445;HRun=14;HaplotypeScore=67.8411;InbreedingCoeff=0.3707;MQ=70.80;MQ0=1;MQRankSum=-0.521;QD=8.96;ReadPosRankSum=-1.712;VQSLOD=2.4259;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,1:40:37.19:0,37,340	0/1:1,6:7:7.27:67,0,7	0/0:22,0:12:2.99:0,3,53	0/1:14,0:12:0.50:0,0,47	0/1:20,1:22:2.12:2,0,192	0/1:9,11:22:64.82:215,0,65	1/1:7,11:20:47.61:383,48,0	0/0:23,3:26:14.89:0,15,223	0/0:14,0:14:20.56:0,21,133	0/0:4,0:9:10.18:0,10,29	0/0:2,0:13:16.27:0,16,47	1/1:3,5:8:3:26,3,0	0/1:9,0:9:5.89:6,0,78	1/1:8,7:15:19.29:251,19,0	1/1:4,7:11:1.73:139,2,0	0/0:0,0:10:20.37:0,20,58	1/1:3,18:23:47.83:409,48,0	1/1:7,14:21:6.32:293,6,0	1/1:3,9:12:20.97:179,21,0	0/1:8,9:17:0.06:109,0,0	1/1:1,7:8:12:105,12,0	0/1:7,7:14:3.07:85,0,3	0/1:14,1:17:13.43:13,0,49	0/0:15,0:17:37.43:0,37,236	1/1:5,20:25:6.42:297,6,0	0/1:9,10:20:9.43:187,0,9	1/1:4,13:18:20.84:172,21,0	1/1:10,10:21:4.57:153,5,0
chr10	65931832	.	AT	A	859.44	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.410;DP=625;FS=5.510;HRun=9;HaplotypeScore=62.6326;InbreedingCoeff=0.9507;MQ=72.61;MQ0=0;MQRankSum=-0.614;QD=16.85;ReadPosRankSum=-2.505;VQSLOD=3.1845;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:45:99:0,135,1509	0/0:4,0:4:12.04:0,12,138	0/0:12,0:11:15.04:0,15,166	0/0:19,0:19:37.32:0,37,389	0/0:22,0:22:54.16:0,54,623	0/0:16,0:16:17.73:0,18,457	0/0:25,1:26:42.14:0,42,725	1/1:7,23:30:37.39:590,37,0	0/0:24,0:24:69.20:0,69,788	0/0:33,0:33:87.03:0,87,947	0/0:23,0:23:63.14:0,63,697	0/0:24,0:24:66.16:0,66,747	0/0:22,0:23:69.02:0,69,766	0/0:22,0:22:66.18:0,66,745	0/0:29,0:29:59.72:0,60,847	0/0:27,0:27:72.21:0,72,831	0/0:29,0:29:75.22:0,75,865	1/1:3,18:21:16.32:388,16,0	0/0:18,0:18:45.11:0,45,494	0/0:21,1:22:29.69:0,30,587	0/0:27,1:28:47.74:0,48,794	0/0:19,0:18:45.12:0,45,511	0/0:18,0:18:51.14:0,51,578	0/0:23,0:23:63.17:0,63,718	0/0:17,0:17:48.14:0,48,554	0/0:20,0:20:54.15:0,54,615	0/0:25,0:25:63.18:0,63,717	0/0:6,0:6:12.04:0,12,138
chr10	65933327	.	A	AGG	331.71	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-1.648;DP=580;FS=9.024;HRun=8;HaplotypeScore=80.4538;InbreedingCoeff=0.8002;MQ=89.67;MQ0=1;MQRankSum=0.005;QD=22.11;ReadPosRankSum=-2.533;VQSLOD=1.6329;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:72.16:0,72,789	0/0:9,0:9:18.02:0,18,200	0/0:38,0:30:23.77:0,24,511	0/0:37,0:32:2.50:0,3,175	0/0:19,0:19:45.04:0,45,477	0/0:26,0:26:75.19:0,75,831	0/0:21,0:21:51.10:0,51,557	1/1:6,9:15:27.09:426,27,0	0/0:19,0:19:48.09:0,48,525	0/0:25,0:25:63.14:0,63,692	0/0:12,0:12:10.35:0,10,312	0/0:22,0:22:58.97:0,59,641	0/0:21,0:21:63.16:0,63,693	0/0:18,0:18:48.11:0,48,535	0/0:20,0:20:45.07:0,45,492	0/0:21,0:21:45.07:0,45,492	0/0:17,0:18:32.93:0,33,426	0/0:24,0:24:69.19:0,69,769	0/0:19,0:19:45.08:0,45,480	0/0:23,0:23:57.13:0,57,625	0/0:9,0:9:27.07:0,27,301	0/0:13,0:13:33.08:0,33,367	0/0:18,0:18:48.13:0,48,533	0/0:21,0:20:60.13:0,60,651	0/0:13,0:13:33.08:0,33,366	0/0:32,0:32:87.21:0,87,959	0/0:29,0:29:78.18:0,78,866	0/0:10,0:10:27.07:0,27,300
chr10	65937206	.	GA	G	2772.24	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=10.334;DP=760;FS=0.000;HRun=3;HaplotypeScore=72.0820;InbreedingCoeff=0.9820;MQ=91.75;MQ0=0;MQRankSum=-0.615;QD=30.46;ReadPosRankSum=-0.719;VQSLOD=2.9354;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:38:99:0,114,1638	0/0:20,0:20:60.18:0,60,825	0/0:35,0:36:96.20:0,96,1392	0/0:27,0:27:71.35:0,71,1029	0/0:17,0:17:45.13:0,45,612	0/0:21,0:21:63.19:0,63,866	0/0:24,0:24:72.24:0,72,1036	0/0:32,0:32:93.29:0,93,1290	0/0:33,0:32:93.30:0,93,1319	1/1:0,38:38:99:1249,102,0	1/1:0,19:19:51.16:632,51,0	0/0:23,0:23:69.23:0,69,994	0/0:38,0:38:99:0,108,1518	0/0:31,0:31:93.29:0,93,1301	0/0:42,0:42:99:0,123,1717	1/1:3,31:34:9.88:1029,10,0	0/0:31,0:31:87.26:0,87,1215	0/0:12,0:12:30.10:0,30,432	0/0:24,0:24:72.24:0,72,1036	0/0:31,0:31:84.28:0,84,1209	0/0:24,0:24:69.21:0,69,973	0/0:31,0:31:87.29:0,87,1252	0/0:22,0:22:60.19:0,60,845	0/0:17,0:17:51.17:0,51,733	0/0:26,0:26:75.24:0,75,1064	0/0:28,0:28:75.25:0,75,1066	0/0:28,0:28:84.28:0,84,1209	0/0:12,0:12:30.10:0,30,432
chr10	65937485	.	TACACACACACACACACACACAC	T	5251.64	PASS	AB=0.841;AC=29;AF=0.558;AN=52;BaseQRankSum=5.551;DP=630;FS=11.284;HRun=0;HaplotypeScore=289.3446;InbreedingCoeff=0.5441;MQ=55.62;MQ0=17;MQRankSum=-3.608;QD=15.09;ReadPosRankSum=1.737;VQSLOD=1.7717;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:44.81:0,45,3295	1/1:4,6:10:0.28:169,0,0	./.	./.	0/0:14,0:14:24.08:0,24,1623	1/1:14,1:17:9.03:417,9,0	0/1:20,0:20:99:218,0,128	0/0:34,0:32:20.92:0,21,386	0/0:8,0:16:18.53:0,19,798	0/0:17,0:17:27.08:0,27,915	0/0:8,0:13:3.01:0,3,95	1/1:10,13:21:10.07:605,10,0	0/0:23,0:22:27.09:0,27,2555	1/1:7,13:20:9.03:344,9,0	1/1:23,17:40:17.84:853,18,0	0/0:18,0:36:32.16:0,32,817	0/1:19,9:26:99:163,0,208	1/1:14,0:13:2.37:8,2,0	1/1:16,4:18:12.29:685,12,0	1/1:13,10:23:8.70:195,9,0	1/1:34,0:33:5.99:51,6,0	1/1:14,12:26:5.71:169,6,0	0/0:17,0:14:18.06:0,18,1302	0/0:29,0:33:54.19:0,54,4739	1/1:10,10:20:3.01:172,3,0	0/1:16,7:23:99:513,0,128	1/1:10,8:18:7.75:517,8,0	1/1:7,3:9:3.01:173,3,0
chr10	65939014	.	A	AT	1593.81	PASS	AB=0.848;AC=8;AF=0.143;AN=56;BaseQRankSum=-6.617;DP=667;FS=6.822;HRun=11;HaplotypeScore=80.6861;InbreedingCoeff=0.4304;MQ=74.94;MQ0=0;MQRankSum=-0.444;QD=12.17;ReadPosRankSum=-0.519;VQSLOD=3.1918;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:26:64.07:0,64,492	0/0:19,0:19:47.79:0,48,371	0/1:20,0:18:18.98:19,0,88	0/0:18,0:18:11.73:0,12,142	0/0:22,0:23:61.80:0,62,470	0/0:34,1:35:62.16:0,62,666	0/0:15,0:15:32.85:0,33,255	0/0:34,0:34:80.63:0,81,625	0/0:3,0:25:36.64:0,37,106	1/1:3,23:26:66.08:646,66,0	1/1:3,24:27:45.80:618,46,0	0/0:32,0:34:79.72:0,80,609	0/0:21,0:21:53.75:0,54,418	0/0:23,0:23:35:0,35,379	0/0:28,0:29:64.77:0,65,493	0/1:4,17:23:9.92:425,0,10	0/0:31,1:35:56.32:0,56,590	0/0:11,0:11:29.87:0,30,232	0/1:17,2:19:20.03:20,0,220	0/0:26,0:27:55.78:0,56,424	0/1:15,1:16:12.52:13,0,228	0/0:23,0:23:47.46:0,47,370	0/0:27,0:28:64.74:0,65,493	0/0:19,0:19:34.68:0,35,315	0/0:25,1:26:20.30:0,20,341	0/0:25,0:25:61.57:0,62,469	0/0:28,0:29:85.72:0,86,655	0/0:7,0:7:11.93:0,12,93
chr10	65941766	.	G	GA	3722.07	PASS	AB=0.664;AC=27;AF=0.482;AN=56;BaseQRankSum=-7.134;DP=533;FS=0.404;HRun=12;HaplotypeScore=57.7017;InbreedingCoeff=0.5239;MQ=57.62;MQ0=4;MQRankSum=0.996;QD=11.42;ReadPosRankSum=-0.776;VQSLOD=2.8408;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,1:42:55.28:0,55,550	0/1:4,7:11:6.89:102,0,7	0/0:5,0:4:4.98:0,5,25	0/0:5,0:5:8.07:0,8,64	0/0:18,1:19:15.90:0,16,238	1/1:10,16:28:10.22:394,10,0	1/1:4,14:17:24.04:234,24,0	0/1:21,4:25:71.56:72,0,170	0/0:1,0:9:16.30:0,16,48	0/0:20,0:22:33.84:0,34,230	0/0:21,0:23:42.84:0,43,296	1/1:5,17:22:39.01:368,39,0	0/0:14,1:15:5.61:0,6,195	0/1:4,8:12:6.88:102,0,7	0/1:6,16:22:23.66:273,0,24	0/0:15,0:15:35.74:0,36,262	1/1:5,25:30:19.29:511,19,0	0/0:23,0:23:53.75:0,54,369	1/1:9,12:21:1.37:235,1,0	1/1:10,15:26:7.74:347,8,0	1/1:4,5:11:17.82:150,18,0	1/1:12,7:19:2.41:183,2,0	0/0:12,0:12:23.84:0,24,173	0/0:16,0:16:41.73:0,42,306	1/1:3,5:8:9.01:88,9,0	0/1:11,14:28:47.29:285,0,47	1/1:12,17:30:7.30:264,7,0	1/1:5,3:13:14.70:116,15,0
chr10	65942336	.	T	TACACATATAC	13911.69	PASS	AB=0.549;AC=29;AF=0.537;AN=54;BaseQRankSum=-5.843;DP=962;FS=4.354;HRun=0;HaplotypeScore=223.5360;InbreedingCoeff=0.7450;MQ=50.53;MQ0=1;MQRankSum=-7.353;QD=24.80;ReadPosRankSum=-1.349;VQSLOD=4.0747;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:55.81:0,56,1398	1/1:3,15:21:5.76:308,6,0	0/0:33,0:21:38.99:0,39,670	0/0:35,0:23:57.09:0,57,1088	0/0:25,0:25:69.21:0,69,1793	0/0:1,24:29:0.14:0,0,0	0/1:5,13:19:0:0,0,0	1/1:68,0:68:99:2745,147,0	1/1:3,46:58:7.97:461,8,0	1/1:38,0:37:77.06:2419,77,0	./.	1/1:6,31:42:7.82:422,8,0	0/0:42,0:42:99:0,123,3482	1/1:5,29:37:7.59:315,8,0	0/0:4,45:54:2.19:0,2,3	1/1:49,0:49:17.38:778,17,0	1/1:3,18:23:5.85:304,6,0	1/1:4,9:17:8.92:245,9,0	1/1:4,7:13:29.98:1112,30,0	0/1:3,30:38:0.27:1,0,0	0/1:7,26:39:0:0,0,0	0/0:2,32:38:0.47:0,0,1	0/0:36,0:36:96.32:0,96,2875	0/0:26,0:27:54.07:0,54,1358	0/0:4,20:26:0.30:0,0,1	1/1:6,36:49:90.15:3354,90,0	1/1:5,23:31:18.06:831,18,0	1/1:1,13:18:15:616,15,0
chr10	65942340	.	C	CATATACACAG	12555.02	PASS	AB=0.997;AC=24;AF=0.444;AN=54;BaseQRankSum=-4.858;DP=950;FS=2.939;HRun=0;HaplotypeScore=235.5658;InbreedingCoeff=0.5320;MQ=49.82;MQ0=2;MQRankSum=-8.824;QD=23.51;ReadPosRankSum=1.202;VQSLOD=4.2291;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:58.99:0,59,1523	1/1:18,0:18:5.76:271,6,0	0/0:36,0:24:44.86:0,45,820	0/0:35,0:24:62.84:0,63,1311	0/0:28,0:28:75.20:0,75,1980	0/0:24,0:24:0.47:0,0,1	0/0:17,0:17:5.98:0,6,47	0/1:72,0:72:65.02:1725,0,65	0/1:54,0:55:13.99:398,0,14	1/1:7,34:49:99:3279,111,0	./.	1/1:36,0:36:7.82:370,8,0	0/0:42,0:42:99:0,123,3641	0/1:37,0:37:88.53:253,0,89	0/0:51,0:50:14.34:0,14,104	1/1:0,47:61:20.32:904,20,0	0/1:22,0:22:13.12:259,0,13	1/1:16,0:16:5.80:191,6,0	1/1:12,0:11:23.46:925,23,0	0/1:33,0:33:0:0,0,0	0/1:31,0:31:0:0,0,0	0/0:36,0:36:0.47:0,0,1	0/0:35,0:35:99:0,99,3021	0/0:26,0:26:57.09:0,57,1463	0/0:27,0:27:6.79:0,7,52	1/1:44,0:44:52.55:2731,53,0	1/1:28,0:28:18.53:726,19,0	1/1:18,0:18:12.04:522,12,0
chr10	65943173	.	GA	G	13932.48	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=19.100;DP=707;FS=6.015;HRun=1;HaplotypeScore=97.0845;InbreedingCoeff=0.9999;MQ=90.90;MQ0=0;MQRankSum=-4.163;QD=39.58;ReadPosRankSum=4.932;VQSLOD=5.0377;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,111,1727	1/1:0,15:15:42.14:587,42,0	0/0:30,0:30:90.31:0,90,1422	0/0:26,0:26:74.80:0,75,1173	0/0:27,0:27:75.26:0,75,1198	1/1:0,33:33:96.32:1341,96,0	1/1:0,30:30:81.27:1132,81,0	0/0:31,0:31:93.32:0,93,1483	0/0:26,0:26:78.27:0,78,1247	0/0:41,0:41:99:0,120,1895	0/0:17,0:17:48.15:0,48,744	1/1:0,25:25:72.24:1006,72,0	0/0:25,0:25:75.26:0,75,1199	1/1:0,28:28:78.26:1089,78,0	1/1:0,31:31:90.30:1258,90,0	0/0:28,0:28:84.29:0,84,1343	1/1:0,16:16:45.15:629,45,0	0/0:21,0:21:63.21:0,63,1000	1/1:0,20:20:60.19:821,60,0	1/1:0,26:26:69.23:964,69,0	1/1:0,29:29:87.29:1209,87,0	1/1:0,21:21:57.19:796,57,0	0/0:11,0:11:33.11:0,33,523	0/0:33,0:33:99:0,99,1578	1/1:0,20:20:57.19:795,57,0	1/1:0,26:26:78.21:1051,78,0	1/1:0,21:21:57.19:796,57,0	1/1:0,11:11:33.11:460,33,0
chr10	65945284	.	GCCCA	G	612.37	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.090;DP=616;FS=6.347;HRun=0;HaplotypeScore=105.3813;InbreedingCoeff=0.9779;MQ=78.07;MQ0=0;MQRankSum=-6.119;QD=32.23;ReadPosRankSum=0.797;VQSLOD=3.0555;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,126,3242	0/0:10,0:10:27.08:0,27,681	0/0:16,0:16:47.71:0,48,1103	0/0:15,0:15:36.09:0,36,959	0/0:20,0:20:51.65:0,52,1368	0/0:18,0:18:54.13:0,54,1421	0/0:39,0:39:99:0,117,3389	0/0:32,0:32:96.32:0,96,2505	1/1:2,17:19:51.08:707,51,0	0/0:24,0:24:69.23:0,69,1704	0/0:13,0:13:36.12:0,36,916	0/0:16,0:16:48.16:0,48,1391	0/0:21,0:21:63.22:0,63,1722	0/0:36,0:36:99:0,108,2889	0/0:28,0:28:84.26:0,84,2270	0/0:21,1:22:20.16:0,20,1724	0/0:27,0:27:81.24:0,81,2221	0/0:30,0:30:90.31:0,90,2545	0/0:23,0:23:69.24:0,69,1868	0/0:9,0:9:21.05:0,21,531	0/0:51,0:51:99:0,153,4119	0/0:12,0:12:33.11:0,33,909	0/0:9,0:9:24:0,24,475	0/0:32,0:32:93.32:0,93,2653	0/0:6,0:6:18.06:0,18,522	0/0:21,0:21:63.21:0,63,1674	0/0:17,0:17:51.18:0,51,1436	0/0:8,0:8:24.08:0,24,695
chr10	65945289	.	GCC	G	310.90	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.773;DP=644;FS=2.116;HRun=2;HaplotypeScore=85.3426;InbreedingCoeff=0.9785;MQ=80.91;MQ0=0;MQRankSum=-6.236;QD=17.27;ReadPosRankSum=1.944;VQSLOD=1.4160;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,132,2531	0/0:10,0:10:30.10:0,30,585	0/0:19,0:19:52.99:0,53,858	0/0:18,0:18:42.14:0,42,781	0/0:22,0:22:57.65:0,58,1061	0/0:21,0:21:63.22:0,63,1252	0/0:42,0:42:99:0,126,2534	0/0:29,0:29:87.29:0,87,1702	1/1:1,17:18:44.88:406,45,0	0/0:21,0:21:60.20:0,60,1177	0/0:14,0:14:39.13:0,39,753	0/0:18,0:18:54.19:0,54,1057	0/0:23,0:23:69.22:0,69,1314	0/0:35,0:35:99:0,105,2052	0/0:31,0:31:93.28:0,93,1783	0/0:21,1:22:37.14:0,37,1250	0/0:26,0:26:78.27:0,78,1576	0/0:29,0:29:87.27:0,87,1715	0/0:26,0:26:78.25:0,78,1464	0/0:12,0:12:33.07:0,33,552	0/0:53,0:53:99:0,160,3126	0/0:15,0:15:36.12:0,36,712	0/0:6,0:6:15.02:0,15,292	0/0:32,0:32:93.32:0,93,1868	0/0:7,0:7:21.06:0,21,380	0/0:24,0:24:72.25:0,72,1387	0/0:17,0:17:48.16:0,48,972	0/0:9,0:9:27.09:0,27,539
chr10	65945958	.	GGAGGAGGAGGGA	G	989.49	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.648;DP=717;FS=10.843;HRun=0;HaplotypeScore=218.8385;InbreedingCoeff=0.8380;MQ=60.50;MQ0=16;MQRankSum=-5.128;QD=47.12;ReadPosRankSum=0.069;VQSLOD=2.2950;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:78.25:0,78,3920	0/0:5,0:5:15.05:0,15,809	0/0:49,0:21:36.09:0,36,1115	0/0:62,0:23:31.40:0,31,1152	0/0:18,0:18:51.16:0,51,2681	0/0:28,0:28:75.26:0,75,3675	0/0:28,0:27:63.22:0,63,3114	0/0:23,0:23:51.11:0,51,1987	1/1:4,17:20:30.10:1084,30,0	0/0:24,0:24:57.20:0,57,2571	0/0:16,0:15:30.10:0,30,1600	0/0:36,0:36:96.31:0,96,4735	0/0:18,0:18:51.17:0,51,2532	0/0:24,0:23:63.22:0,63,3183	0/0:32,0:32:72.25:0,72,3704	0/0:22,0:22:54.15:0,54,2209	0/0:25,0:25:60.45:0,60,3273	0/0:26,0:26:63.22:0,63,3300	0/0:17,0:16:36.12:0,36,1723	0/0:24,0:24:57.18:0,57,2585	0/0:29,0:29:75.26:0,75,3869	0/0:17,0:17:48.16:0,48,2511	0/0:20,0:20:48.16:0,48,2256	0/0:36,0:36:99:0,99,4855	0/0:21,0:21:57.18:0,57,2687	0/0:28,0:28:78.15:0,78,3786	0/0:31,0:30:58.50:0,59,2897	0/0:2,0:2:3.01:0,3,117
chr10	65948397	.	TA	T	1476.82	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=10.497;DP=640;FS=2.255;HRun=9;HaplotypeScore=61.0245;InbreedingCoeff=0.9876;MQ=79.50;MQ0=0;MQRankSum=0.419;QD=21.10;ReadPosRankSum=0.970;VQSLOD=4.4940;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:42,1:43:84.30:0,84,1198	0/0:10,0:10:27.08:0,27,312	0/0:18,0:17:26:0,26,354	0/0:16,0:15:15.04:0,15,173	0/0:29,0:30:84.04:0,84,927	0/0:17,0:17:42.12:0,42,485	0/0:22,0:22:57.14:0,57,639	0/0:35,0:35:87.22:0,87,971	0/0:24,0:24:69.19:0,69,786	1/1:1,22:23:66.02:600,66,0	1/1:3,19:22:56.94:505,57,0	0/0:30,0:30:90.25:0,90,1022	0/0:20,0:20:60.17:0,60,684	0/0:21,0:21:63.19:0,63,727	0/0:34,0:34:90.15:0,90,985	1/1:2,23:25:28.36:514,28,0	0/0:22,0:22:66.20:0,66,762	0/0:15,0:15:36.11:0,36,415	0/0:17,0:18:44.95:0,45,489	0/0:24,0:24:69.21:0,69,796	0/0:30,0:30:81.24:0,81,935	0/0:23,0:23:63.16:0,63,714	0/0:25,0:25:57.17:0,57,658	0/0:19,0:19:51.15:0,51,589	0/0:20,0:20:57.17:0,57,658	0/0:27,0:27:78.21:0,78,884	0/0:22,0:22:54.16:0,54,622	0/0:5,0:5:15.02:0,15,152
chr10	65948612	.	G	GCACACACACACA	4240.55	PASS	AB=0.824;AC=28;AF=0.636;AN=44;BaseQRankSum=0.827;DP=541;FS=6.581;HRun=0;HaplotypeScore=180.5136;InbreedingCoeff=0.6050;MQ=52.52;MQ0=12;MQRankSum=-7.752;QD=14.98;ReadPosRankSum=-4.910;VQSLOD=1.8938;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:26:39.13:0,39,1175	1/1:5,0:6:3.01:136,3,0	0/0:29,0:15:6.49:0,6,207	0/0:25,0:11:3.01:0,3,100	0/0:25,0:25:30.10:0,30,972	1/1:14,1:17:9.97:323,10,0	1/1:24,0:23:11.99:105,12,0	1/1:27,0:26:46.63:530,47,0	0/1:16,0:35:21.65:22,0,113	1/1:19,0:22:22.32:623,22,0	./.	1/1:11,5:17:1.85:213,2,0	0/0:13,0:13:24.06:0,24,681	./.	./.	1/1:21,1:22:9.48:321,9,0	1/1:12,4:16:15.05:558,15,0	0/1:12,0:12:51.63:56,0,52	1/1:9,0:10:7.27:202,7,0	./.	1/1:17,0:15:3.90:74,4,0	./.	0/0:22,0:22:24.08:0,24,701	0/0:34,0:34:58.35:0,58,1501	./.	1/1:18,6:23:18.51:538,19,0	1/1:14,0:14:11.07:268,11,0	1/1:15,0:15:12.04:273,12,0
chr10	65949120	.	C	CGT	2041.30	PASS	AB=0.842;AC=36;AF=0.692;AN=52;BaseQRankSum=-2.072;DP=743;FS=1.569;HRun=0;HaplotypeScore=113.8312;InbreedingCoeff=0.2738;MQ=67.80;MQ0=14;MQRankSum=0.177;QD=3.85;ReadPosRankSum=-1.288;VQSLOD=2.4096;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:39:26.74:0,27,211	1/1:3,1:4:3.01:45,3,0	./.	./.	0/0:18,0:19:23.69:0,24,211	1/1:6,8:14:9.03:134,9,0	0/1:22,3:24:25.27:157,0,25	1/1:38,0:38:14.20:90,14,0	1/1:21,0:19:3:27,3,0	1/1:29,0:27:29.96:302,30,0	1/1:19,0:18:3.01:43,3,0	1/1:27,0:27:5.99:50,6,0	0/0:19,0:22:14.70:0,15,126	0/1:24,2:26:16.80:39,0,17	1/1:28,8:35:5.70:89,6,0	1/1:21,0:27:9:78,9,0	0/1:26,12:38:17.11:163,0,17	1/1:16,0:14:12.02:131,12,0	1/1:18,0:17:3:28,3,0	0/1:13,7:20:11.57:220,0,12	1/1:41,12:55:6.02:89,6,0	1/1:19,7:28:5.85:89,6,0	0/0:25,0:27:17.88:0,18,175	0/0:40,0:41:41.93:0,42,428	0/1:16,1:17:14.68:39,0,15	0/1:26,7:35:8.36:243,0,8	1/1:20,5:26:5.80:89,6,0	1/1:5,1:6:5.99:67,6,0
chr10	65949599	.	AT	A	1646.13	PASS	AB=0.973;AC=34;AF=0.607;AN=56;BaseQRankSum=11.427;DP=556;FS=0.395;HRun=13;HaplotypeScore=82.6857;InbreedingCoeff=0.1673;MQ=74.81;MQ0=2;MQRankSum=-2.598;QD=3.99;ReadPosRankSum=5.563;VQSLOD=0.7728;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,2:30:25.43:0,25,535	0/1:6,0:6:3.13:29,0,3	0/0:31,1:15:6.60:0,7,149	0/1:26,0:15:7.65:8,0,67	0/0:20,0:20:41.96:0,42,387	1/1:26,0:26:4.94:87,5,0	0/1:22,0:22:28.85:76,0,29	0/0:30,0:31:60.01:0,60,613	1/1:13,0:13:14.85:56,15,0	0/1:17,0:17:39.04:52,0,39	1/1:16,0:16:33.23:130,33,0	1/1:18,0:18:11.81:96,12,0	0/0:12,1:14:16.99:0,17,313	1/1:18,0:18:0.40:57,0,0	1/1:15,0:15:0.51:63,1,0	0/1:17,0:17:44.57:50,0,45	1/1:19,0:19:12.28:98,12,0	0/1:20,0:21:22.49:88,0,22	0/1:25,0:25:81.18:92,0,81	1/1:31,0:31:21.67:202,22,0	1/1:9,0:9:20.61:76,21,0	1/1:16,0:16:34.19:136,34,0	0/0:13,0:14:35.87:0,36,325	0/1:9,4:13:29.66:30,0,225	1/1:19,0:19:9.85:89,10,0	0/1:25,1:26:22.60:104,0,23	0/1:25,0:23:18.11:123,0,18	1/1:15,0:15:6.98:88,7,0
chr10	65949611	.	TTA	T	1605.70	PASS	AB=0.991;AC=29;AF=0.518;AN=56;BaseQRankSum=11.681;DP=537;FS=2.657;HRun=0;HaplotypeScore=91.7479;InbreedingCoeff=0.2300;MQ=74.21;MQ0=2;MQRankSum=-1.494;QD=4.50;ReadPosRankSum=7.621;VQSLOD=1.7597;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:77.87:0,78,1163	0/1:6,0:6:5.75:14,0,6	0/0:38,0:17:44.55:0,45,443	0/0:24,0:15:18.18:0,18,187	0/0:18,0:18:54.03:0,54,777	1/1:18,1:19:14.46:127,14,0	0/1:20,0:20:29.49:39,0,29	0/0:32,0:32:91.78:0,92,1336	1/1:11,1:12:13.38:72,13,0	0/1:19,1:20:33.36:149,0,33	1/1:17,1:18:39.70:184,40,0	1/1:17,0:17:5.60:50,6,0	0/0:14,0:14:42.03:0,42,658	0/1:15,0:15:4.23:32,0,4	0/1:13,0:13:4.28:31,0,4	0/1:14,0:14:31.07:31,0,35	0/1:17,1:18:0.46:81,0,0	0/1:21,0:21:29.99:43,0,30	0/1:29,0:29:34.59:240,0,35	1/1:28,1:29:13.41:172,13,0	1/1:10,0:10:16.48:52,16,0	1/1:15,0:15:28.07:105,28,0	0/0:13,0:13:39.11:0,39,615	0/0:14,0:14:38.80:0,39,542	1/1:18,1:19:6.34:88,6,0	0/1:23,0:23:18.33:179,0,18	0/1:26,0:24:27.46:64,0,27	1/1:13,0:13:0.57:40,1,0
chr10	65949612	.	TA	T	8547.35	PASS	AB=0.962;AC=41;AF=0.732;AN=56;BaseQRankSum=4.911;DP=533;FS=5.634;HRun=4;HaplotypeScore=59.9440;InbreedingCoeff=0.9015;MQ=74.42;MQ0=2;MQRankSum=0.160;QD=22.79;ReadPosRankSum=4.827;VQSLOD=3.7276;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:64.04:0,64,784	1/1:0,6:6:12.04:142,12,0	0/0:37,0:18:46.54:0,47,370	0/1:23,1:15:21.42:21,0,65	0/0:21,0:21:58.38:0,58,594	1/1:2,16:19:37.93:419,38,0	1/1:3,17:20:29.84:386,30,0	0/0:31,1:32:61.97:0,62,917	1/1:1,11:12:17.99:196,18,0	1/1:3,16:19:51.03:514,51,0	1/1:1,17:18:50.75:512,51,0	1/1:1,16:17:33.10:391,33,0	0/0:14,0:14:40.34:0,40,453	1/1:1,14:15:23.86:285,24,0	1/1:1,12:13:24.07:283,24,0	1/1:2,11:13:26.10:320,26,0	1/1:2,15:17:36.04:409,36,0	1/1:3,18:21:36.11:426,36,0	1/1:5,22:27:66.13:664,66,0	1/1:3,26:29:78.08:868,78,0	1/1:0,10:10:24.07:285,24,0	1/1:1,14:15:39.05:443,39,0	0/0:15,0:15:42.08:0,42,475	0/0:14,0:14:34.88:0,35,356	1/1:2,17:19:36.03:411,36,0	1/1:4,19:23:60.03:647,60,0	1/1:2,22:23:48.15:569,48,0	1/1:1,12:13:30.09:354,30,0
chr10	65949810	.	C	CCAAA	1790.29	PASS	AB=0.635;AC=16;AF=0.296;AN=54;BaseQRankSum=8.704;DP=436;FS=6.222;HRun=0;HaplotypeScore=81.1335;InbreedingCoeff=-0.2000;MQ=65.03;MQ0=0;MQRankSum=-0.675;QD=8.25;ReadPosRankSum=-2.636;VQSLOD=1.0856;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:44.89:0,45,668	0/1:2,0:6:39.09:39,0,58	0/0:9,0:6:11.66:0,12,110	0/1:5,0:5:8.12:8,0,27	0/0:18,0:22:59.99:0,60,791	0/0:5,0:16:24.46:0,24,172	0/1:5,0:15:46.18:46,0,75	0/0:30,0:36:99:0,101,1492	0/0:4,0:10:11.90:0,12,136	0/0:13,0:20:54.05:0,54,768	0/0:31,0:33:82.03:0,82,1204	0/1:3,0:12:22.69:23,0,40	0/0:14,0:15:30.21:0,30,448	1/1:2,0:4:9.03:123,9,0	0/1:6,0:15:39.12:137,0,39	0/0:14,0:14:38.94:0,39,598	0/1:5,0:15:36.01:145,0,36	0/1:6,0:12:3.59:213,0,4	0/1:6,0:21:99:273,0,104	0/1:11,2:30:99:276,0,146	./.	0/1:2,0:5:26.57:27,0,29	0/0:15,0:15:31.07:0,31,440	0/0:4,0:4:12.03:0,12,202	0/1:5,0:12:36.50:100,0,36	0/1:10,0:23:99:305,0,200	0/1:5,0:27:21.81:124,0,22	0/1:4,0:11:7.76:111,0,8
chr10	65951887	.	T	TCTG	817.56	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-2.687;DP=711;FS=0.000;HRun=0;HaplotypeScore=107.5229;InbreedingCoeff=0.9983;MQ=59.48;MQ0=0;MQRankSum=-0.583;QD=40.88;ReadPosRankSum=0.505;VQSLOD=4.5494;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:66.22:0,66,1051	0/0:9,0:9:27.02:0,27,355	0/0:24,0:21:57.18:0,57,857	0/0:25,0:22:43.04:0,43,718	0/0:26,0:26:78.27:0,78,1245	0/0:33,0:33:93.32:0,93,1490	0/0:22,0:22:63.20:0,63,984	0/0:39,0:39:93.30:0,93,1422	0/0:24,0:24:69.22:0,69,1085	0/0:28,0:28:78.26:0,78,1234	0/0:24,0:24:66.21:0,66,1038	0/0:18,0:18:45.14:0,45,693	0/0:22,0:22:60.20:0,60,961	0/0:17,0:17:48.16:0,48,751	0/0:31,0:31:87.28:0,87,1341	0/0:26,0:26:72.24:0,72,1129	0/0:18,0:18:45.15:0,45,717	1/1:2,17:20:39.30:912,39,0	0/0:21,0:21:51.17:0,51,799	0/0:47,0:47:99:0,141,2259	0/0:21,0:21:63.18:0,63,964	0/0:35,0:35:99:0,99,1583	0/0:26,0:26:78.27:0,78,1251	0/0:23,0:23:69.24:0,69,1105	0/0:34,0:34:84.44:0,84,1570	0/0:35,0:35:99:0,102,1635	0/0:25,0:25:63.21:0,63,1006	0/0:12,0:12:30.10:0,30,482
chr10	65952974	.	GCC	G	9578.66	PASS	AB=0.519;AC=37;AF=0.661;AN=56;BaseQRankSum=1.756;DP=573;FS=20.805;HRun=11;HaplotypeScore=82.7218;InbreedingCoeff=0.8796;MQ=72.78;MQ0=2;MQRankSum=-1.086;QD=24.19;ReadPosRankSum=4.392;VQSLOD=2.8235;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:32:63.84:0,64,795	1/1:2,11:13:30.54:320,31,0	0/0:13,0:13:24.07:0,24,337	0/0:18,0:17:25.19:0,25,363	0/0:15,0:16:33.03:0,33,398	1/1:2,16:18:48.12:511,48,0	1/1:4,22:28:68.63:694,69,0	0/0:26,1:29:15.98:0,16,439	0/0:4,1:19:0.75:0,1,69	1/1:2,19:21:51.05:529,51,0	1/1:2,16:18:45.09:478,45,0	1/1:0,20:21:62.90:651,63,0	0/0:14,0:15:41.58:0,42,527	1/1:3,17:20:48.10:511,48,0	1/1:4,20:24:54.12:575,54,0	1/1:3,30:32:72.05:821,72,0	1/1:8,14:22:38.86:396,39,0	0/1:1,2:14:37.88:38,0,42	1/1:5,15:19:39.07:415,39,0	1/1:0,21:21:63.16:670,63,0	1/1:5,18:25:37.68:523,38,0	1/1:2,17:19:39.08:415,39,0	0/0:14,0:18:35.23:0,35,454	0/0:14,0:16:41.11:0,41,565	1/1:1,13:15:32.45:327,32,0	1/1:3,25:28:77.72:779,78,0	1/1:2,21:23:54.13:575,54,0	1/1:2,11:13:33.07:351,33,0
chr10	65955518	.	TCAA	T	691.42	PASS	AB=0.981;AC=16;AF=0.286;AN=56;BaseQRankSum=11.917;DP=492;FS=12.557;HRun=0;HaplotypeScore=107.0450;InbreedingCoeff=-0.3002;MQ=65.46;MQ0=2;MQRankSum=-5.719;QD=2.93;ReadPosRankSum=6.979;VQSLOD=0.5670;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:92.79:0,93,1546	0/1:11,0:11:32.57:33,0,45	0/0:28,0:17:15.57:0,16,217	0/0:18,0:15:21.36:0,21,242	0/0:24,0:25:56.74:0,57,1201	0/1:25,0:24:50.91:51,0,125	0/1:17,0:17:60.03:87,0,60	0/0:27,0:28:72.17:0,72,1048	0/0:13,0:13:32.13:0,32,426	0/0:16,0:16:13.54:0,14,151	0/1:16,0:16:34.74:35,0,53	0/1:10,1:11:28.49:90,0,28	0/0:11,0:11:27.07:0,27,416	0/1:6,0:6:13.57:31,0,14	0/1:16,0:16:37.23:37,0,107	0/0:18,0:17:8.51:0,9,133	0/1:18,0:17:30.48:30,0,96	0/0:13,0:13:36.04:0,36,475	0/1:19,0:18:11.08:11,0,198	0/1:15,0:15:38.96:39,0,52	0/1:12,0:12:12.59:13,0,50	1/1:10,0:10:0.38:40,0,0	0/0:22,0:22:54.93:0,55,924	0/0:18,0:18:35.23:0,35,541	0/1:17,0:17:44.82:45,0,86	0/1:24,1:26:99:141,0,178	0/1:15,2:17:78.56:164,0,79	0/0:11,0:11:2.96:0,3,97
chr10	65955519	.	CAAA	C	4033.14	PASS	AB=0.895;AC=37;AF=0.661;AN=56;BaseQRankSum=7.467;DP=497;FS=3.190;HRun=17;HaplotypeScore=97.1100;InbreedingCoeff=0.9125;MQ=65.40;MQ0=2;MQRankSum=-6.892;QD=13.67;ReadPosRankSum=5.184;VQSLOD=1.6107;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:36:90.67:0,91,1284	1/1:2,9:11:14.92:236,15,0	0/0:27,0:17:16.94:0,17,171	0/0:18,0:14:12.49:0,12,161	0/0:22,0:25:65.53:0,66,813	1/1:7,17:24:35.71:356,36,0	1/1:3,14:17:10.10:285,10,0	0/0:25,0:31:58.32:0,58,716	0/0:14,0:14:26.72:0,27,225	1/1:5,1:16:23.11:152,23,0	1/1:3,2:16:35.20:236,35,0	1/1:3,7:10:17.94:171,18,0	0/0:11,0:11:27.02:0,27,279	1/1:1,4:6:8.86:79,9,0	1/1:4,9:15:21.10:228,21,0	1/1:7,0:16:26.12:155,26,0	1/1:6,11:17:22.41:243,22,0	0/0:11,0:12:24.02:0,24,284	1/1:12,7:18:20.43:200,20,0	1/1:4,10:15:32.59:285,33,0	1/1:3,9:12:14.80:140,15,0	1/1:2,7:10:17.55:184,18,0	0/0:19,0:26:61.61:0,62,816	0/1:15,2:17:1.17:1,0,294	1/1:5,11:17:16.55:182,17,0	1/1:10,15:26:48.65:484,49,0	1/1:7,10:17:32.99:336,33,0	1/1:6,4:11:8.68:79,9,0
chr10	65956325	.	T	TA	5870.54	PASS	AB=0.606;AC=29;AF=0.518;AN=56;BaseQRankSum=-8.696;DP=501;FS=0.764;HRun=9;HaplotypeScore=48.7858;InbreedingCoeff=0.8522;MQ=58.37;MQ0=0;MQRankSum=1.153;QD=24.16;ReadPosRankSum=2.414;VQSLOD=5.5440;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,1:32:77.97:0,78,676	1/1:2,10:12:24.06:266,24,0	0/0:3,0:3:6:0,6,52	0/0:4,0:4:8.99:0,9,75	0/0:31,0:31:80.89:0,81,683	1/1:5,24:29:22.02:673,22,0	1/1:0,15:15:36.10:398,36,0	0/0:42,0:42:99:0,108,928	0/0:16,0:16:44.99:0,45,391	0/0:33,0:33:80.96:0,81,700	0/0:25,0:26:61.13:0,61,521	1/1:2,9:10:21.06:232,21,0	0/0:9,0:9:17.99:0,18,156	1/1:5,12:17:12.58:341,13,0	1/1:1,8:9:1.02:239,1,0	0/0:15,0:15:38.97:0,39,332	1/1:1,23:24:60.16:664,60,0	0/0:26,0:26:65.96:0,66,568	1/1:0,16:16:48.10:518,48,0	0/1:7,13:20:9.99:356,0,10	1/1:3,12:15:36.10:398,36,0	1/1:0,7:7:18.45:185,18,0	0/0:8,0:8:17.49:0,17,140	0/0:13,0:12:26.97:0,27,234	1/1:3,18:21:48.13:531,48,0	1/1:8,9:17:4.03:273,4,0	1/1:2,15:17:42.11:464,42,0	1/1:0,13:13:30.08:332,30,0
chr10	65957847	.	T	TCAAA	34986.64	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=-11.737;DP=669;FS=11.175;HRun=0;HaplotypeScore=97.8245;InbreedingCoeff=0.9918;MQ=75.25;MQ0=0;MQRankSum=-11.620;QD=68.87;ReadPosRankSum=0.521;VQSLOD=6.6962;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:72.25:0,72,1379	1/1:2,5:9:24.04:571,24,0	0/0:14,0:14:35.99:0,36,590	0/0:19,0:19:21.53:0,22,777	0/0:34,0:34:96.31:0,96,1827	1/1:3,21:26:66.18:1727,66,0	1/1:4,11:15:42.14:1060,42,0	1/1:6,14:22:63.21:1581,63,0	1/1:0,15:15:36.12:986,36,0	1/1:10,17:27:78.27:1962,78,0	1/1:5,21:27:75.17:1686,75,0	1/1:3,9:12:33.07:841,33,0	0/0:20,0:20:54.18:0,54,1019	1/1:3,14:18:45.08:1108,45,0	1/1:5,35:40:99:2746,108,0	1/1:4,28:32:90.26:2282,90,0	1/1:3,10:14:33.11:862,33,0	1/1:4,23:27:69.19:1799,69,0	1/1:4,12:16:45.15:1162,45,0	1/1:2,45:49:99:3569,141,0	1/1:3,6:9:18.06:449,18,0	1/1:0,31:34:93.27:2324,93,0	0/0:29,0:29:87.28:0,87,1641	0/0:21,0:21:63.22:0,63,1210	1/1:2,27:30:84.25:2235,84,0	1/1:1,34:37:99:2811,108,0	1/1:1,39:41:99:2937,108,0	1/1:1,4:7:12.04:287,12,0
chr10	65957927	.	T	TA	3117.57	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-4.532;DP=651;FS=1.341;HRun=7;HaplotypeScore=82.2256;InbreedingCoeff=0.9468;MQ=76.32;MQ0=0;MQRankSum=-0.721;QD=30.56;ReadPosRankSum=0.475;VQSLOD=3.7941;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:48.07:0,48,464	0/0:12,0:12:36.05:0,36,343	0/0:18,0:18:35.93:0,36,328	0/0:13,0:13:30.04:0,30,289	0/0:38,0:38:99:0,111,1072	0/0:17,0:16:48.01:0,48,452	0/0:16,0:16:36.06:0,36,347	0/0:32,0:32:84.01:0,84,776	0/0:20,0:20:51.08:0,51,493	1/1:3,31:34:96.26:1127,96,0	1/1:5,31:36:93.23:1095,93,0	0/0:11,0:11:30.05:0,30,290	0/0:21,0:21:51.07:0,51,492	0/0:17,0:17:42.07:0,42,406	0/0:27,0:27:75.11:0,75,720	1/1:7,25:32:87.25:1038,87,0	0/0:19,0:19:54.09:0,54,521	0/0:17,0:17:3.82:0,4,312	0/0:20,0:20:51.08:0,51,493	0/0:39,0:39:99:0,105,1000	0/0:14,0:14:39.06:0,39,376	0/0:25,0:25:60.09:0,60,579	0/0:34,0:34:93.12:0,93,891	0/0:14,0:14:42.07:0,42,406	0/0:20,0:20:57.05:0,57,534	0/0:24,1:25:29.86:0,30,572	0/0:39,0:39:87.02:0,87,815	0/0:23,0:23:60.06:0,60,571
chr10	65959230	.	TTTTATTATTTA	T	3988.55	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=8.052;DP=242;FS=14.395;HRun=0;HaplotypeScore=69.1844;InbreedingCoeff=0.7139;MQ=63.26;MQ0=1;MQRankSum=-6.191;QD=33.52;ReadPosRankSum=3.583;VQSLOD=1.6900;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:24.08:0,24,1120	1/1:1,4:5:3.01:100,3,0	0/0:8,0:5:12:0,12,252	0/0:6,0:5:2.99:0,3,43	0/0:8,0:8:21.07:0,21,726	1/1:2,8:10:21.07:664,21,0	1/1:1,2:3:3.01:62,3,0	0/0:33,0:33:78.27:0,78,2788	0/0:5,0:5:9.02:0,9,234	0/0:9,0:9:12.04:0,12,572	0/0:2,0:2:6.02:0,6,247	1/1:1,1:2:3.01:100,3,0	0/0:4,0:4:6.02:0,6,332	1/1:0,2:2:3.01:100,3,0	1/1:1,6:7:9.03:301,9,0	0/0:7,0:7:6.02:0,6,293	1/1:3,12:15:9.03:238,9,0	0/0:14,0:14:36.09:0,36,1642	1/1:3,8:10:24.07:482,24,0	1/1:5,3:8:9.03:301,9,0	1/1:0,7:7:3.01:100,3,0	1/1:1,1:2:3.01:97,3,0	0/0:7,0:7:9.03:0,9,288	0/0:5,0:5:9.03:0,9,363	1/1:6,12:18:15.05:463,15,0	1/1:3,6:9:12.04:279,12,0	1/1:4,8:12:9.03:301,9,0	1/1:1,7:8:12.04:399,12,0
chr10	65961937	.	A	AG	2275.09	PASS	AB=0.813;AC=42;AF=0.955;AN=44;BaseQRankSum=-2.411;DP=154;FS=0.000;HRun=5;HaplotypeScore=11.5714;InbreedingCoeff=-0.1336;MQ=21.84;MQ0=65;MQRankSum=-0.764;QD=16.14;ReadPosRankSum=-1.745;VQSLOD=0.8401;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:12,2:3:25.64:33,0,26	1/1:0,2:2:6.02:74,6,0	./.	./.	1/1:6,6:6:12.04:158,12,0	1/1:2,2:2:3.01:39,3,0	1/1:2,3:3:9.03:118,9,0	1/1:4,7:9:24.08:310,24,0	1/1:6,7:7:21.07:276,21,0	1/1:3,2:5:6.01:75,6,0	./.	1/1:2,4:4:12.04:158,12,0	1/1:5,2:2:6.02:79,6,0	./.	1/1:3,4:4:6.02:79,6,0	1/1:1,3:3:9.03:118,9,0	1/1:0,2:2:6.02:79,6,0	1/1:1,2:2:6.02:73,6,0	1/1:3,5:7:15.05:197,15,0	1/1:3,2:2:6.02:79,6,0	0/1:2,1:2:26.19:33,0,26	1/1:3,1:2:3.01:39,3,0	1/1:5,2:2:6.02:79,6,0	./.	1/1:3,4:5:9.03:118,9,0	1/1:2,1:1:3.01:39,3,0	1/1:5,3:3:9.03:118,9,0	./.
chr10	65962014	.	TA	T	721.94	PASS	AB=0.835;AC=14;AF=0.250;AN=56;BaseQRankSum=4.289;DP=294;FS=3.477;HRun=13;HaplotypeScore=36.9537;InbreedingCoeff=0.3692;MQ=51.57;MQ0=10;MQRankSum=2.745;QD=6.33;ReadPosRankSum=0.498;VQSLOD=1.2860;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:11:24:0,24,225	0/1:4,1:5:6.97:7,0,83	0/0:7,0:5:6.48:0,6,62	0/0:1,0:1:2.68:0,3,11	0/1:12,2:13:19.78:20,0,151	0/0:9,1:11:7.96:0,8,220	0/1:6,1:7:6.90:7,0,96	1/1:9,12:19:32.75:240,33,0	1/1:3,0:10:14.25:41,14,0	1/1:3,12:15:35.77:263,36,0	0/1:4,7:11:5.31:129,0,5	0/0:9,0:8:17.69:0,18,155	0/0:9,0:10:21.51:0,22,205	0/0:9,0:9:5.20:0,5,202	0/0:11,0:10:18.03:0,18,175	1/1:1,10:11:0.66:168,1,0	0/0:10,0:10:21.41:0,21,182	0/0:12,0:11:5.28:0,5,212	0/0:12,0:14:32.81:0,33,287	0/0:9,0:9:21.02:0,21,196	0/1:9,1:10:3.88:4,0,128	0/1:9,1:10:0.88:1,0,154	0/0:19,1:19:23.86:0,24,368	0/0:5,0:2:5.96:0,6,47	0/0:10,0:11:26.88:0,27,246	0/0:8,0:9:23.82:0,24,208	0/0:14,1:14:17.15:0,17,328	0/0:3,0:3:8.85:0,9,72
chr10	65963776	.	CTCTT	C	16475.47	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=8.911;DP=620;FS=0.369;HRun=0;HaplotypeScore=113.8535;InbreedingCoeff=0.9597;MQ=76.78;MQ0=1;MQRankSum=-5.418;QD=36.05;ReadPosRankSum=5.434;VQSLOD=4.7064;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,126,3189	1/1:0,7:7:15.05:273,15,0	0/0:16,0:16:2.96:0,3,522	0/0:16,0:16:40.36:0,40,814	0/0:20,0:20:57.20:0,57,1454	1/1:0,12:12:21.07:382,21,0	1/1:4,24:28:51.17:927,51,0	0/0:18,0:17:42.14:0,42,1028	1/1:1,23:24:45.15:815,45,0	1/1:2,19:21:54.17:948,54,0	1/1:3,11:14:21.07:382,21,0	1/1:3,26:29:66.21:1200,66,0	0/0:22,0:22:57.20:0,57,1439	1/1:6,26:32:57.20:1035,57,0	1/1:1,35:36:90.31:1637,90,0	1/1:1,26:27:57.20:1036,57,0	1/1:3,24:26:60.21:1091,60,0	1/1:1,23:24:48.16:873,48,0	1/1:7,8:15:24.08:419,24,0	1/1:2,7:9:15.05:273,15,0	1/1:7,62:69:99:2060,107,0	1/1:2,17:19:24.08:436,24,0	0/0:10,0:10:24.08:0,24,613	0/0:16,0:16:36.12:0,36,943	1/1:1,15:16:39.13:709,39,0	1/1:7,23:30:69.24:1231,69,0	1/1:2,10:12:27.09:491,27,0	1/1:0,6:6:15.05:257,15,0
chr10	65964352	.	G	GTCAGAAT	25839.54	PASS	AB=0.576;AC=29;AF=0.518;AN=56;BaseQRankSum=-5.185;DP=600;FS=1.786;HRun=0;HaplotypeScore=128.0167;InbreedingCoeff=0.9233;MQ=82.82;MQ0=0;MQRankSum=-18.833;QD=84.72;ReadPosRankSum=-2.720;VQSLOD=5.0235;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,114,2966	1/1:0,5:5:15.05:545,15,0	0/0:23,0:23:63.20:0,63,1564	0/0:22,0:22:60.16:0,60,1492	0/0:13,0:13:33.11:0,33,861	1/1:5,8:15:36.12:1114,36,0	1/1:14,19:35:90.31:3168,90,0	0/0:27,0:27:78.26:0,78,1819	0/0:37,0:37:99:0,102,2671	0/0:18,0:18:45.15:0,45,1163	0/0:10,0:10:24.08:0,24,590	1/1:3,16:21:57.20:2133,57,0	0/0:18,0:18:51.18:0,51,1336	1/1:11,13:28:66.23:2234,66,0	1/1:8,25:36:93.32:3286,93,0	0/0:21,0:21:60.19:0,60,1514	1/1:7,20:33:63.21:2300,63,0	0/0:29,0:29:81.28:0,81,2032	1/1:11,13:26:75.24:2551,75,0	1/1:4,10:14:30.10:925,30,0	1/1:11,12:25:57.19:1560,57,0	1/1:4,8:12:30.10:829,30,0	0/0:7,0:7:21.07:0,21,554	0/0:31,0:31:90.31:0,90,2333	1/1:4,13:18:48.16:1662,48,0	0/1:5,13:19:21.94:2026,0,22	1/1:6,6:12:24.08:967,24,0	1/1:1,4:5:15.05:540,15,0
chr10	65965673	.	TCA	T	876.57	PASS	AB=0.973;AC=29;AF=0.604;AN=48;BaseQRankSum=2.062;DP=510;FS=3.367;HRun=0;HaplotypeScore=67.7544;InbreedingCoeff=0.4343;MQ=69.01;MQ0=10;MQRankSum=0.691;QD=3.13;ReadPosRankSum=0.541;VQSLOD=1.4197;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:23:12.02:0,12,149	0/1:6,0:6:0:0,0,0	./.	./.	0/1:11,2:13:17.14:17,0,109	1/1:16,0:16:5.96:44,6,0	0/0:31,0:30:11.69:0,12,153	./.	0/0:13,0:15:12:0,12,119	0/1:17,0:17:0:0,0,0	0/0:6,0:11:0:0,0,0	1/1:18,3:20:3.01:32,3,0	0/0:17,0:16:6.02:0,6,76	1/1:12,6:19:14.26:142,14,0	1/1:15,7:23:11.86:110,12,0	1/1:8,0:16:5.68:28,6,0	1/1:13,1:16:17.25:146,17,0	1/1:17,0:17:13.76:120,14,0	0/1:12,0:11:14.97:19,0,15	1/1:14,0:14:5.95:44,6,0	1/1:32,0:32:9.44:77,9,0	1/1:20,0:20:8.87:65,9,0	0/1:12,0:12:18.90:19,0,38	0/0:32,0:33:2.37:0,2,248	0/0:10,0:10:6.02:0,6,88	1/1:11,0:10:8.23:70,8,0	1/1:11,4:14:9.02:96,9,0	./.
chr10	65965930	.	CTGCTG	C	19894.06	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=14.196;DP=529;FS=4.973;HRun=0;HaplotypeScore=118.2637;InbreedingCoeff=0.9926;MQ=86.79;MQ0=0;MQRankSum=-13.939;QD=54.36;ReadPosRankSum=2.551;VQSLOD=5.1757;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,105,3281	1/1:0,7:7:18.06:401,18,0	0/0:22,0:22:53.94:0,54,1500	0/0:24,0:24:61.02:0,61,1752	0/0:26,0:26:75.26:0,75,2366	1/1:1,19:20:48.16:1068,48,0	1/1:4,22:26:51.18:1133,51,0	1/1:2,20:22:54.17:1119,54,0	1/1:0,15:15:42.14:935,42,0	1/1:0,15:15:42.12:846,42,0	1/1:0,14:14:36.12:801,36,0	1/1:0,20:20:51.18:1132,51,0	0/0:18,0:18:48.16:0,48,1549	1/1:0,26:26:68.88:1532,69,0	1/1:0,17:17:36.12:800,36,0	1/1:0,18:18:51.18:1136,51,0	1/1:1,24:25:54.19:1202,54,0	1/1:1,19:20:42.14:927,42,0	1/1:2,16:18:51.18:1133,51,0	1/1:0,15:16:45.15:994,45,0	1/1:1,22:23:48.16:1068,48,0	1/1:0,12:12:27.06:600,27,0	0/0:17,0:17:51.18:0,51,1646	0/0:21,0:21:60.21:0,60,1871	1/1:1,11:12:33.11:734,33,0	1/1:0,15:15:45.15:999,45,0	1/1:0,21:21:48.16:1068,48,0	1/1:0,4:4:12.04:267,12,0
chr10	65966208	.	GGGAGA	G	2035.68	PASS	AB=0.827;AC=7;AF=0.125;AN=56;BaseQRankSum=2.923;DP=593;FS=13.256;HRun=0;HaplotypeScore=256.9741;InbreedingCoeff=-0.1530;MQ=64.90;MQ0=1;MQRankSum=-6.320;QD=10.18;ReadPosRankSum=-1.432;VQSLOD=1.0601;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:72.25:0,72,2326	0/0:8,2:10:24.01:0,24,785	0/0:17,0:16:36.58:0,37,907	0/0:13,0:12:6.70:0,7,601	0/0:21,0:21:63.20:0,63,1977	0/0:14,10:24:38.68:0,39,1183	0/0:7,3:10:8.91:0,9,236	0/1:50,25:74:99:1279,0,4473	0/0:9,5:14:21.04:0,21,573	0/1:15,10:25:99:468,0,1181	0/0:17,11:28:2.13:0,2,312	0/0:13,5:18:35.86:0,36,1073	0/0:21,0:21:63.22:0,63,2060	0/0:13,3:16:36.09:0,36,1145	0/0:14,5:19:18.06:0,18,484	0/0:15,10:25:38.41:0,38,1151	0/0:15,5:20:29.95:0,30,924	0/1:12,3:15:0.75:1,0,982	0/1:14,1:15:35.99:36,0,1032	0/0:24,15:39:26.51:0,27,813	0/0:18,2:20:21.07:0,21,685	0/0:7,2:9:11.75:0,12,343	0/0:22,0:22:63.06:0,63,2096	0/0:10,0:10:30.10:0,30,935	0/0:11,2:13:8.79:0,9,273	0/1:19,7:26:99:271,0,1696	0/1:24,6:30:37.91:38,0,1826	0/1:13,1:14:66.13:66,0,490
chr10	65966236	.	G	GTA	607.54	PASS	AB=1.000;AC=14;AF=0.250;AN=56;BaseQRankSum=13.217;DP=616;FS=3.219;HRun=0;HaplotypeScore=274.7685;InbreedingCoeff=-0.1788;MQ=51.05;MQ0=2;MQRankSum=-9.353;QD=2.07;ReadPosRankSum=4.075;VQSLOD=2.2085;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:48.16:0,48,622	0/1:10,0:10:21.64:22,0,133	0/0:13,0:11:14.72:0,15,192	0/0:10,0:8:7.48:0,7,114	0/0:26,0:26:78.21:0,78,971	0/1:23,0:23:70.14:70,0,301	0/1:15,0:15:27.19:27,0,93	0/0:84,0:84:74.78:0,75,1363	1/1:7,6:13:23.54:333,24,0	0/1:25,0:25:34.74:35,0,497	0/1:31,0:31:25.31:25,0,178	0/1:18,0:18:17.88:18,0,288	0/0:22,0:22:51.15:0,51,647	0/1:18,0:18:79.86:80,0,159	0/0:21,0:21:5.42:0,5,394	0/1:23,0:23:55.01:55,0,220	0/0:15,0:15:9.91:0,10,149	0/0:13,0:13:8.92:0,9,164	0/0:13,0:12:6.35:0,6,288	0/1:42,0:42:26.63:27,0,300	0/0:17,0:17:12.04:0,12,149	0/0:13,0:13:17.87:0,18,218	0/0:17,0:17:48.14:0,48,606	0/0:7,0:7:21.07:0,21,269	0/1:20,0:20:22.40:22,0,312	0/0:32,0:32:0.06:0,0,666	0/1:39,0:39:47.37:47,0,721	0/1:17,0:17:0.31:0,0,242
chr10	65966248	.	G	GTA	3432.87	PASS	AB=0.815;AC=18;AF=0.321;AN=56;BaseQRankSum=13.963;DP=641;FS=4.239;HRun=0;HaplotypeScore=257.4469;InbreedingCoeff=-0.4802;MQ=50.59;MQ0=2;MQRankSum=-12.849;QD=7.18;ReadPosRankSum=4.727;VQSLOD=3.0672;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:54.14:0,54,778	0/1:9,3:12:99:125,0,224	0/0:13,0:10:21.49:0,21,293	0/0:10,0:7:8.19:0,8,153	0/0:28,0:28:84.25:0,84,1238	0/1:21,8:29:99:362,0,547	0/1:9,6:15:99:123,0,203	0/1:67,2:69:99:309,0,1591	0/1:11,3:14:61.45:159,0,61	0/1:22,6:28:99:241,0,744	0/1:25,8:33:99:101,0,334	0/1:12,6:18:99:160,0,355	0/0:19,0:19:57.18:0,57,847	0/1:11,6:18:99:291,0,234	0/1:18,3:21:57.07:57,0,526	0/1:18,7:25:99:252,0,387	0/0:16,0:16:26.99:0,27,366	0/1:13,1:14:32.51:33,0,251	0/1:12,2:13:64.27:64,0,398	0/1:28,16:44:99:193,0,489	0/0:10,7:17:18.04:0,18,251	0/0:11,1:12:20.90:0,21,319	0/0:20,0:20:54.17:0,54,798	0/0:8,0:8:24.08:0,24,365	0/1:17,8:25:99:143,0,602	0/1:27,7:34:99:289,0,892	0/1:32,12:44:99:495,0,1020	0/1:19,2:21:35.17:35,0,556
chr10	65966653	.	G	GAT	3841.83	PASS	AB=0.997;AC=27;AF=0.482;AN=56;BaseQRankSum=-5.198;DP=740;FS=0.298;HRun=0;HaplotypeScore=134.0898;InbreedingCoeff=-0.0704;MQ=65.42;MQ0=16;MQRankSum=-1.115;QD=7.61;ReadPosRankSum=-3.887;VQSLOD=2.2122;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:74.09:0,74,1036	0/1:10,0:10:20.26:20,0,32	0/0:53,0:29:54.28:0,54,651	0/0:49,0:19:10.38:0,10,298	0/0:23,0:22:57.07:0,57,679	0/1:24,0:24:51.14:167,0,51	0/1:23,0:23:44.37:173,0,44	1/1:5,28:31:80.60:688,81,0	0/1:27,0:27:56.22:56,0,117	1/1:27,0:27:72.85:424,73,0	1/1:18,0:19:36.70:205,37,0	0/1:23,0:23:57.73:58,0,116	0/0:18,0:18:50.85:0,51,635	0/1:25,0:25:99:116,0,100	0/1:36,0:36:98.60:214,0,99	1/1:17,0:17:44.49:241,44,0	0/1:16,0:16:7.11:7,0,99	1/1:10,0:13:12.78:159,13,0	1/1:22,0:22:29.21:355,29,0	0/1:31,0:31:34.28:34,0,119	0/1:34,0:34:99:141,0,114	0/1:20,1:21:26.88:253,0,27	0/0:26,0:26:68.81:0,69,836	0/0:29,0:29:75.12:0,75,926	0/1:24,0:24:71.14:135,0,71	0/1:27,0:28:55.40:212,0,55	0/1:37,0:36:99:117,0,150	0/1:15,0:15:56.71:68,0,57
chr10	65966654	.	ATG	A	1553.28	PASS	AB=0.922;AC=19;AF=0.339;AN=56;BaseQRankSum=6.131;DP=764;FS=4.153;HRun=0;HaplotypeScore=139.4000;InbreedingCoeff=-0.0159;MQ=64.85;MQ0=16;MQRankSum=1.134;QD=3.89;ReadPosRankSum=1.618;VQSLOD=2.8730;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:35,2:37:5.59:6,0,764	0/1:8,2:10:41.99:42,0,170	0/0:54,0:29:14.98:0,15,175	0/0:48,0:19:12:0,12,146	0/1:19,4:22:51.81:52,0,595	0/1:22,3:25:72.46:72,0,389	0/1:23,1:24:30.02:30,0,302	0/0:39,0:35:39.03:0,39,414	0/1:26,3:29:60.88:61,0,505	1/1:8,18:27:56.99:632,57,0	1/1:7,12:19:30.08:343,30,0	0/1:23,1:24:3.80:4,0,456	0/0:17,1:18:36.12:0,36,551	0/0:26,0:26:22.39:0,22,466	0/1:35,1:38:34.30:34,0,551	1/1:5,12:17:33.09:378,33,0	0/0:19,0:19:39.50:0,40,422	0/0:18,0:18:12.81:0,13,103	0/1:19,1:20:16.34:16,0,119	0/1:28,3:32:31.25:31,0,572	0/0:35,0:35:46.32:0,46,638	0/1:21,0:21:4.25:4,0,253	0/0:26,1:27:13.60:0,14,632	0/1:26,3:29:8.45:8,0,763	0/1:23,1:24:11.07:11,0,466	0/0:27,1:28:13.76:0,14,405	0/0:37,0:36:43.80:0,44,749	0/0:14,1:15:1.67:0,2,290
chr10	65967283	.	GCTAGACA	G	27600.26	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=13.243;DP=617;FS=5.050;HRun=0;HaplotypeScore=185.2172;InbreedingCoeff=0.9964;MQ=75.85;MQ0=0;MQRankSum=-17.952;QD=63.16;ReadPosRankSum=3.460;VQSLOD=4.9510;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,148,5804	1/1:0,10:10:27.09:701,27,0	0/0:15,0:15:45.15:0,45,1355	0/0:24,0:24:71.03:0,71,1895	0/0:19,0:19:51.17:0,51,1846	1/1:0,13:13:30.10:808,30,0	1/1:6,26:32:66.22:1648,66,0	1/1:5,25:30:75.24:1877,75,0	1/1:0,27:27:66.23:1778,66,0	1/1:1,20:21:60.18:1522,60,0	1/1:0,13:13:30.10:782,30,0	1/1:3,23:26:66.23:1711,66,0	0/0:31,0:31:93.32:0,93,3614	1/1:3,22:25:54.19:1455,54,0	1/1:0,24:25:69.24:1837,69,0	1/1:0,28:28:75.26:2021,75,0	1/1:0,13:13:33.11:889,33,0	1/1:1,13:14:27.09:685,27,0	1/1:2,12:14:36.12:969,36,0	1/1:0,21:21:57.19:1355,57,0	1/1:2,17:19:33.11:755,33,0	1/1:3,22:26:54.18:1356,54,0	0/0:12,0:12:36.12:0,36,1466	0/0:30,0:30:90.31:0,90,3658	1/1:2,16:18:33.11:889,33,0	1/1:1,23:24:66.23:1778,66,0	1/1:0,32:32:90.31:2425,90,0	1/1:0,6:6:15.05:361,15,0
chr10	65967963	.	TACACACATACACACAC	T	1180.42	PASS	AB=1.000;AC=20;AF=0.357;AN=56;BaseQRankSum=0.697;DP=402;FS=6.730;HRun=0;HaplotypeScore=146.2320;InbreedingCoeff=-0.0048;MQ=50.52;MQ0=14;MQRankSum=0.343;QD=5.90;ReadPosRankSum=-0.655;VQSLOD=1.7387;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:30.33:0,30,1564	0/0:2,0:2:3.01:0,3,92	0/0:43,0:17:41.94:0,42,583	0/0:33,0:18:38.28:0,38,766	0/0:14,0:14:36.01:0,36,615	0/0:10,0:9:5.97:0,6,79	0/1:9,0:8:15.95:16,0,62	0/1:14,0:11:18.50:41,0,19	1/1:1,12:13:9.50:395,10,0	1/1:2,9:11:11.94:201,12,0	0/0:0,7:7:0:0,0,0	0/1:16,0:15:19.99:20,0,231	0/0:9,0:9:18.03:0,18,384	0/1:10,0:10:34.86:35,0,135	0/0:13,0:13:6.02:0,6,161	1/1:3,12:15:5.12:273,5,0	0/0:16,0:15:12.03:0,12,186	0/1:15,0:14:0.84:1,0,445	0/1:13,0:12:1.23:1,0,242	0/1:13,0:13:48.81:61,0,49	0/1:31,0:29:87.33:87,0,186	1/1:5,0:4:2.51:24,3,0	0/0:14,0:14:22.29:0,22,741	0/0:25,0:25:57.04:0,57,1554	0/1:5,0:5:30.85:62,0,31	0/1:12,0:12:63.39:63,0,143	0/1:11,0:11:42.39:42,0,119	0/1:7,0:7:17.92:18,0,210
chr10	65967967	.	CACAT	C	1937.98	PASS	AB=0.780;AC=38;AF=0.679;AN=56;BaseQRankSum=4.596;DP=394;FS=2.580;HRun=0;HaplotypeScore=82.2711;InbreedingCoeff=0.6439;MQ=48.55;MQ0=14;MQRankSum=-2.574;QD=8.21;ReadPosRankSum=2.310;VQSLOD=2.2160;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:29.57:0,30,474	1/1:2,1:3:2.99:25,3,0	0/0:43,0:16:41.77:0,42,334	0/0:32,0:15:24.55:0,25,334	0/0:14,0:14:38.77:0,39,364	1/1:2,8:9:6.02:112,6,0	1/1:7,1:7:7.79:104,8,0	1/1:13,0:10:11.36:128,11,0	1/1:13,0:13:8.98:83,9,0	1/1:9,0:9:11.94:97,12,0	0/0:7,0:7:0:0,0,0	1/1:16,1:16:17:143,17,0	0/0:8,0:8:18.01:0,18,223	1/1:9,0:9:7.28:106,7,0	1/1:3,10:13:6.02:112,6,0	1/1:15,0:15:5.60:65,6,0	0/1:3,11:13:22.82:104,0,23	0/1:15,0:14:45.04:49,0,45	1/1:9,0:8:14.08:104,14,0	1/1:13,0:13:14.50:121,15,0	1/1:31,1:30:29.89:235,30,0	1/1:5,0:4:5.99:50,6,0	0/0:14,0:14:7.92:0,8,246	0/0:23,0:23:56.96:0,57,598	1/1:7,0:7:14.79:108,15,0	1/1:13,1:14:12.61:129,13,0	1/1:11,0:11:12.57:116,13,0	1/1:6,0:6:13.90:139,14,0
chr10	65967969	.	CAT	C	1642.87	PASS	AB=0.804;AC=38;AF=0.704;AN=54;BaseQRankSum=5.401;DP=385;FS=2.558;HRun=0;HaplotypeScore=74.2149;InbreedingCoeff=0.6560;MQ=47.87;MQ0=14;MQRankSum=-3.570;QD=7.11;ReadPosRankSum=1.689;VQSLOD=2.7901;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:20.08:0,20,413	1/1:4,0:4:5.99:48,6,0	0/0:41,0:15:41.73:0,42,330	0/0:33,0:15:24.54:0,25,334	0/0:13,0:13:38.73:0,39,323	1/1:10,0:9:5.98:46,6,0	1/1:8,0:7:10.53:82,11,0	1/1:12,0:9:10.34:139,10,0	1/1:13,0:13:8.10:42,8,0	1/1:9,0:9:11.89:83,12,0	./.	1/1:17,0:16:7.29:92,7,0	0/0:8,0:8:17.96:0,18,198	1/1:8,1:9:8.04:90,8,0	1/1:12,0:12:5.98:46,6,0	1/1:13,0:13:5.81:37,6,0	0/1:14,0:13:23.74:36,0,24	1/1:15,0:14:2.51:93,3,0	1/1:9,0:8:13.50:103,14,0	1/1:11,0:11:14.71:122,15,0	1/1:32,0:30:29.89:235,30,0	1/1:5,0:4:5.99:50,6,0	0/0:12,1:13:12.01:0,12,229	0/0:23,0:23:48.93:0,49,522	1/1:7,0:7:7.46:81,7,0	0/1:5,9:14:4.63:146,0,5	1/1:8,2:10:17.94:143,18,0	1/1:7,0:7:16.43:119,16,0
chr10	65968002	.	A	ACC	1794.42	PASS	AB=1.000;AC=45;AF=0.833;AN=54;BaseQRankSum=-0.482;DP=272;FS=0.000;HRun=1;HaplotypeScore=74.4334;InbreedingCoeff=0.0688;MQ=53.01;MQ0=10;MQRankSum=-2.051;QD=7.01;ReadPosRankSum=-1.273;VQSLOD=-0.4912;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:17,0:17:12.58:131,0,13	1/1:4,0:4:8.94:89,9,0	0/0:12,0:3:2.64:0,3,15	0/1:14,0:8:0.92:71,0,1	0/1:9,0:8:3.80:86,0,4	1/1:8,0:7:10.54:60,11,0	1/1:6,0:5:5.19:28,5,0	1/1:15,0:14:35.55:242,36,0	1/1:8,0:8:7.51:33,8,0	1/1:7,0:6:7.97:46,8,0	0/1:6,0:6:0:0,0,0	1/1:16,0:16:8.19:54,8,0	0/1:6,0:6:9.25:9,0,23	1/1:6,0:6:4.07:12,4,0	1/1:12,1:13:19.41:141,19,0	1/1:8,0:8:10.03:58,10,0	1/1:13,0:12:4.95:94,5,0	1/1:4,7:10:5.45:78,5,0	1/1:9,0:8:13.39:87,13,0	1/1:7,0:7:2.83:26,3,0	0/1:22,0:22:0:1,0,0	./.	0/1:9,0:8:14.97:15,0,39	1/1:10,0:10:6.32:99,6,0	1/1:7,0:7:5.94:41,6,0	1/1:13,0:12:7.97:141,8,0	1/1:6,0:6:0.06:78,0,0	1/1:6,0:6:17.55:192,18,0
chr10	65968563	.	A	AACTGGGG	38487.79	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=-0.523;DP=603;FS=20.202;HRun=0;HaplotypeScore=149.0033;InbreedingCoeff=0.9792;MQ=90.72;MQ0=0;MQRankSum=-17.890;QD=96.95;ReadPosRankSum=-0.588;VQSLOD=4.2399;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,154,4107	1/1:3,7:11:21.07:760,21,0	0/0:34,0:34:99:0,102,2408	0/0:28,0:28:75.25:0,75,1858	0/0:28,0:28:81.28:0,81,2210	1/1:1,17:21:57.19:2202,57,0	1/1:4,18:23:66.19:2332,66,0	1/1:7,15:26:75.24:2647,75,0	1/1:5,12:18:45.15:1776,45,0	1/1:4,17:23:66.22:2601,66,0	1/1:0,8:8:24.08:959,24,0	1/1:3,14:19:48.16:2002,48,0	0/0:14,0:14:39.13:0,39,1066	1/1:2,14:17:45.15:1763,45,0	1/1:0,22:24:63.22:2506,63,0	1/1:5,8:13:36.12:1358,36,0	1/1:4,8:17:33.11:1227,33,0	1/1:1,16:19:48.16:2010,48,0	1/1:10,6:23:69.16:2019,69,0	1/1:3,14:20:48.12:1691,48,0	1/1:8,15:23:51.12:1772,51,0	1/1:7,13:21:54.10:1888,54,0	0/0:17,0:17:48.16:0,48,1306	0/0:34,0:34:99:0,102,2780	1/1:0,8:9:21.07:799,21,0	1/1:5,25:33:99:3786,99,0	1/1:4,16:23:53.89:2141,54,0	1/1:0,2:6:6.02:251,6,0
chr10	65968786	.	CA	C	15877.63	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=7.935;DP=670;FS=0.659;HRun=3;HaplotypeScore=73.5035;InbreedingCoeff=0.9984;MQ=89.84;MQ0=0;MQRankSum=-5.804;QD=33.36;ReadPosRankSum=1.773;VQSLOD=5.2839;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,105,1512	1/1:1,13:14:33.10:409,33,0	0/0:32,0:32:84.17:0,84,1085	0/0:25,0:25:59.84:0,60,718	0/0:29,0:29:84.27:0,84,1190	1/1:0,18:18:42.13:520,42,0	1/1:0,16:16:45.14:558,45,0	1/1:1,19:20:57.15:681,57,0	1/1:0,18:18:48.15:595,48,0	1/1:2,23:25:66.20:804,66,0	1/1:3,12:15:33.10:409,33,0	1/1:2,24:26:69.01:831,69,0	0/0:21,0:21:63.21:0,63,899	1/1:3,26:29:78.24:967,78,0	1/1:0,22:22:63.20:781,63,0	1/1:1,22:23:63.20:779,63,0	1/1:1,40:41:99:1302,105,0	1/1:0,28:28:84.26:1041,84,0	1/1:1,22:23:66.18:783,66,0	1/1:1,20:21:51.16:630,51,0	1/1:0,37:37:99:1264,102,0	1/1:1,26:27:78.24:960,78,0	0/0:20,0:20:57.17:0,57,801	0/0:31,0:31:93.30:0,93,1320	1/1:0,16:16:45.14:558,45,0	1/1:0,32:32:90.28:1113,90,0	1/1:0,19:19:54.17:669,54,0	1/1:0,6:6:18.06:223,18,0
chr10	65969257	.	G	GGGAGGA	8781.61	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=5.192;DP=419;FS=9.945;HRun=0;HaplotypeScore=143.8223;InbreedingCoeff=0.8962;MQ=66.30;MQ0=0;MQRankSum=-10.477;QD=29.77;ReadPosRankSum=-2.649;VQSLOD=3.6218;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:87.26:0,87,1592	1/1:5,1:6:15.05:277,15,0	0/0:12,0:11:21.03:0,21,307	0/0:10,0:8:23.92:0,24,286	0/0:6,0:6:13.18:0,13,165	1/1:14,3:19:42.12:781,42,0	1/1:19,4:26:69.16:1351,69,0	1/1:19,0:21:1.83:21,2,0	0/0:11,0:11:27.05:0,27,305	1/1:9,0:10:9.07:74,9,0	1/1:5,0:7:5.58:48,6,0	1/1:12,2:16:32.97:539,33,0	0/0:15,0:15:45.15:0,45,895	1/1:17,2:21:48.09:915,48,0	1/1:9,1:17:36.10:715,36,0	1/1:16,0:17:3.77:36,4,0	1/1:11,2:17:36.07:695,36,0	1/1:8,0:16:22.52:128,23,0	1/1:14,0:15:33.03:493,33,0	1/1:10,0:10:15.05:223,15,0	1/1:21,1:23:24.05:308,24,0	1/1:6,3:11:18.04:373,18,0	0/0:12,0:12:30.10:0,30,556	0/0:24,0:24:66.17:0,66,1199	1/1:8,2:11:27.07:497,27,0	1/1:18,0:20:37.67:658,38,0	1/1:5,3:8:21.07:493,21,0	1/1:4,0:4:12.04:155,12,0
chr10	65969287	.	GCC	G	10635.43	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=9.807;DP=460;FS=17.719;HRun=6;HaplotypeScore=91.8709;InbreedingCoeff=0.9915;MQ=87.51;MQ0=1;MQRankSum=-6.323;QD=34.53;ReadPosRankSum=2.743;VQSLOD=3.5891;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,123,2177	1/1:2,5:7:15.05:200,15,0	0/0:20,0:20:36.37:0,36,738	0/0:22,0:21:48.27:0,48,754	0/0:10,0:10:27.09:0,27,486	1/1:0,14:14:42.02:501,42,0	1/1:0,23:23:69.23:920,69,0	1/1:1,18:19:54.18:718,54,0	1/1:0,12:12:36.12:480,36,0	1/1:0,15:14:42.14:560,42,0	1/1:1,8:9:18.06:240,18,0	1/1:2,16:18:48.11:620,48,0	0/0:14,0:14:42.14:0,42,745	1/1:1,24:25:60.15:780,60,0	1/1:2,18:20:51.09:641,51,0	1/1:1,8:9:24.55:320,25,0	1/1:1,15:16:33.11:440,33,0	1/1:1,14:15:39.11:499,39,0	1/1:3,14:17:42.10:538,42,0	1/1:1,11:12:33.11:440,33,0	1/1:1,20:21:57.06:700,57,0	1/1:0,14:14:39.04:480,39,0	0/0:14,0:14:42.13:0,42,715	0/0:30,0:30:87.30:0,87,1554	1/1:0,8:8:24.08:320,24,0	1/1:1,17:18:51.17:680,51,0	1/1:2,9:11:27.09:360,27,0	1/1:0,5:5:15.05:198,15,0
chr10	65970238	.	CA	C	727.46	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.266;DP=415;FS=1.574;HRun=8;HaplotypeScore=44.8772;InbreedingCoeff=0.7679;MQ=76.08;MQ0=1;MQRankSum=1.298;QD=20.78;ReadPosRankSum=2.652;VQSLOD=3.6515;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:63.18:0,63,749	0/0:5,0:5:15.01:0,15,166	0/0:21,0:17:34.97:0,35,342	0/0:9,0:8:3.10:0,3,96	0/0:16,0:16:42.13:0,42,506	0/0:18,0:18:48.11:0,48,563	0/0:10,0:10:27.08:0,27,322	0/0:31,0:31:78.20:0,78,895	0/0:6,0:6:15.05:0,15,179	0/0:30,0:30:84.26:0,84,1008	0/0:13,0:13:27.08:0,27,326	0/0:8,0:8:24.07:0,24,290	0/0:7,0:7:18.06:0,18,217	0/0:8,0:8:21.06:0,21,246	0/0:9,0:9:27.08:0,27,322	0/0:11,0:11:33.10:0,33,398	0/0:25,0:25:75.21:0,75,878	1/1:2,33:35:86.81:822,87,0	0/0:12,0:12:30.09:0,30,357	0/0:14,0:14:36.10:0,36,423	0/0:14,0:14:33.08:0,33,385	0/0:3,0:3:9.03:0,9,109	0/0:10,0:10:30.09:0,30,362	0/0:5,0:5:15.03:0,15,169	0/0:11,0:11:33.10:0,33,397	0/0:26,0:26:66.19:0,66,782	0/0:22,0:22:63.18:0,63,749	0/0:14,0:14:36.09:0,36,421
chr10	65971862	.	CGTGTGTGT	C	559.06	PASS	AB=0.958;AC=11;AF=0.306;AN=36;BaseQRankSum=3.408;DP=387;FS=1.298;HRun=0;HaplotypeScore=86.7480;InbreedingCoeff=0.2607;MQ=63.01;MQ0=12;MQRankSum=-2.760;QD=5.38;ReadPosRankSum=-0.065;VQSLOD=1.6427;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:18.06:0,18,632	./.	./.	0/0:21,0:11:0:0,0,0	0/0:11,0:10:3.01:0,3,122	./.	1/1:11,1:14:3.01:56,3,0	0/0:17,0:17:3.01:0,3,38	0/0:11,0:11:3.01:0,3,56	0/0:11,0:11:0.89:0,1,2	./.	1/1:11,2:13:5.81:148,6,0	0/0:16,0:16:12.04:0,12,374	0/1:12,0:13:30.65:50,0,31	1/1:13,3:17:12.04:278,12,0	1/1:5,0:7:2.90:16,3,0	0/1:20,0:18:5.20:33,0,5	0/1:19,0:19:55.85:94,0,56	./.	0/0:5,0:6:3.01:0,3,34	0/0:42,0:38:0:0,0,0	./.	0/0:4,0:4:3.01:0,3,92	0/0:26,0:29:29.22:0,29,857	./.	./.	./.	./.
chr10	65971928	.	GGCCCCATCT	G	468.05	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.036;DP=323;FS=7.073;HRun=0;HaplotypeScore=98.0291;InbreedingCoeff=0.7609;MQ=72.15;MQ0=1;MQRankSum=-4.058;QD=66.86;ReadPosRankSum=-0.970;VQSLOD=3.0003;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:63.22:0,63,3075	0/0:2,0:2:6.02:0,6,294	0/0:23,0:17:47.53:0,48,1476	0/0:26,0:18:50.97:0,51,1856	0/0:4,0:4:12.04:0,12,589	0/0:10,0:10:30.10:0,30,1442	0/0:14,0:14:36.05:0,36,1492	0/0:8,0:8:20.94:0,21,840	1/1:0,7:7:18.53:559,19,0	0/0:7,0:7:18.06:0,18,874	0/0:7,0:7:18.05:0,18,735	0/0:11,0:11:33.11:0,33,1581	0/0:6,0:6:18.06:0,18,879	0/0:7,0:7:18.06:0,18,821	0/0:12,0:12:33.07:0,33,1486	0/0:9,0:9:24.04:0,24,1047	0/0:16,0:16:45.15:0,45,2122	0/0:13,0:12:39.09:0,39,1736	0/0:11,0:11:33.11:0,33,1608	0/0:10,0:10:27.09:0,27,1320	0/0:28,0:28:72.25:0,72,3371	0/0:15,0:15:45.15:0,45,2131	0/0:4,0:3:9.03:0,9,441	0/0:15,0:15:45.15:0,45,2204	0/0:13,0:13:39.13:0,39,1834	0/0:7,0:7:21.07:0,21,963	0/0:11,0:10:27.09:0,27,1302	0/0:3,0:3:9.03:0,9,418
chr10	65972026	.	T	TA	1941.46	PASS	AB=0.772;AC=38;AF=0.679;AN=56;BaseQRankSum=1.142;DP=367;FS=3.975;HRun=15;HaplotypeScore=50.9424;InbreedingCoeff=0.2260;MQ=62.26;MQ0=2;MQRankSum=-0.158;QD=6.54;ReadPosRankSum=-2.958;VQSLOD=1.4814;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:25.34:0,25,159	0/1:3,0:2:0:0,0,0	0/1:14,0:8:0:0,0,0	0/0:12,0:12:0.82:0,1,30	0/0:17,0:19:9.98:0,10,139	1/1:2,8:10:8.99:76,9,0	1/1:0,10:11:26.81:216,27,0	1/1:18,1:28:29.20:167,29,0	0/1:5,1:6:13.36:13,0,42	1/1:18,0:16:10.86:52,11,0	1/1:10,0:9:10.83:58,11,0	0/1:4,6:10:6.03:64,0,6	0/0:13,0:14:2.32:0,2,93	1/1:2,6:8:14.97:123,15,0	1/1:2,11:15:8.27:161,8,0	1/1:11,0:11:14.93:72,15,0	0/1:4,7:12:15.06:103,0,15	0/1:4,7:12:33.21:69,0,33	1/1:8,3:14:20.65:145,21,0	1/1:5,1:8:2.58:102,3,0	1/1:2,7:9:5.99:50,6,0	1/1:2,7:9:14.98:126,15,0	0/1:12,2:14:4.67:5,0,87	0/1:9,1:10:1.61:2,0,102	0/1:8,7:15:35.61:36,0,39	1/1:6,10:16:32.56:245,33,0	1/1:8,7:17:2.23:106,2,0	0/1:3,11:14:0.03:108,0,0
chr10	65972362	.	T	TGCCTAGTAAGCGCAA	8720.49	PASS	AB=0.944;AC=14;AF=0.259;AN=54;BaseQRankSum=0.201;DP=441;FS=8.133;HRun=0;HaplotypeScore=166.5840;InbreedingCoeff=0.7839;MQ=52.23;MQ0=17;MQRankSum=-11.368;QD=72.67;ReadPosRankSum=-2.513;VQSLOD=3.6999;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:51.18:0,51,2273	0/0:4,0:3:9.03:0,9,307	./.	0/0:13,0:4:11.94:0,12,243	0/0:21,0:20:51.18:0,51,2128	0/0:13,0:12:20.74:0,21,957	0/0:13,0:13:33.11:0,33,1453	1/1:23,0:21:32.98:461,33,0	1/1:8,0:15:36.12:1683,36,0	1/1:5,9:13:30.10:2027,30,0	1/1:4,5:8:12.04:850,12,0	0/0:17,0:17:51.18:0,51,2194	0/0:12,0:12:33.11:0,33,1416	0/1:13,0:14:99:150,0,1736	0/0:21,0:21:63.22:0,63,2699	1/1:7,6:14:36.05:2314,36,0	0/1:20,0:20:99:144,0,2310	1/1:4,0:8:21.07:1092,21,0	0/0:15,0:14:36.09:0,36,1083	0/0:14,0:14:39.13:0,39,1570	0/0:10,0:10:27.05:0,27,939	0/0:10,0:9:27.09:0,27,1142	0/0:21,0:21:51.17:0,51,2008	0/0:23,0:23:39.40:0,39,2573	0/0:23,0:21:56.79:0,57,2479	0/0:21,0:21:63.21:0,63,2607	0/0:22,0:22:66.17:0,66,2274	0/0:19,0:19:54.19:0,54,2250
chr10	65972398	.	AAAAG	A	1024.70	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=3.385;DP=500;FS=4.061;HRun=0;HaplotypeScore=98.3326;InbreedingCoeff=0.8933;MQ=51.19;MQ0=14;MQRankSum=-7.130;QD=13.48;ReadPosRankSum=-4.089;VQSLOD=2.2438;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:63.71:0,64,977	0/0:5,0:4:11.99:0,12,143	0/0:26,0:2:6.01:0,6,64	0/0:34,0:4:3.34:0,3,22	0/0:29,0:28:32.50:0,33,779	0/0:7,0:7:9.03:0,9,150	0/0:17,0:17:43.84:0,44,690	1/1:15,1:15:27.38:247,27,0	1/1:10,0:10:6.60:116,7,0	1/1:15,2:15:37.21:291,37,0	1/1:8,0:8:13.10:119,13,0	0/0:18,0:18:50.12:0,50,771	0/0:16,0:16:44.67:0,45,531	0/0:19,0:19:47.99:0,48,827	0/0:19,0:19:50.98:0,51,899	1/1:14,1:14:31.85:272,32,0	0/0:29,0:29:79.58:0,80,1304	1/1:9,1:10:21.45:159,21,0	0/0:13,0:11:29.54:0,30,382	0/0:12,0:12:35.67:0,36,546	0/0:5,0:5:8.96:0,9,132	0/0:13,0:12:36.04:0,36,593	0/0:25,0:25:57.33:0,57,817	0/0:21,0:21:51.07:0,51,891	0/0:21,0:20:24.34:0,24,759	0/0:21,0:21:56.11:0,56,854	0/0:23,0:23:50:0,50,874	0/0:20,0:20:51.11:0,51,811
chr10	65972399	.	AAAG	A	1422.51	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=0.882;DP=497;FS=2.212;HRun=0;HaplotypeScore=88.1509;InbreedingCoeff=0.9191;MQ=51.24;MQ0=14;MQRankSum=-7.288;QD=18.72;ReadPosRankSum=-4.770;VQSLOD=2.5194;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:57.47:0,57,788	0/0:5,0:4:11.97:0,12,125	0/0:26,0:2:5.87:0,6,39	0/0:35,0:4:4.77:0,5,21	0/0:29,0:28:13.12:0,13,658	0/0:8,0:8:11.90:0,12,135	0/0:16,0:16:43.84:0,44,576	1/1:9,6:14:37.69:349,38,0	1/1:10,0:10:13.61:115,14,0	1/1:18,0:16:46.31:396,46,0	1/1:7,1:8:22.66:192,23,0	0/0:18,0:18:50.47:0,50,649	0/0:15,0:15:44.82:0,45,455	0/0:20,0:20:50.85:0,51,713	0/0:19,0:19:48.96:0,49,701	1/1:14,1:14:33.08:407,33,0	0/0:29,0:29:81.78:0,82,1057	1/1:10,0:10:22.50:148,22,0	0/0:12,0:10:27.47:0,27,305	0/0:12,0:12:35.67:0,36,478	0/0:4,0:4:8.97:0,9,105	0/0:13,0:12:36.03:0,36,481	0/0:26,0:26:27.29:0,27,673	0/0:21,0:21:51.07:0,51,728	0/0:21,0:20:25.70:0,26,639	0/0:20,0:20:45.31:0,45,680	0/0:22,0:22:47.51:0,48,750	0/0:20,0:20:51.06:0,51,691
chr10	65972400	.	AAG	A	1302.97	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=1.965;DP=494;FS=10.205;HRun=0;HaplotypeScore=79.3153;InbreedingCoeff=0.8259;MQ=51.16;MQ0=14;MQRankSum=-6.902;QD=16.29;ReadPosRankSum=-4.746;VQSLOD=1.3898;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:30.13:0,30,598	0/0:5,0:4:11.90:0,12,112	0/0:26,0:2:3.68:0,4,15	0/0:36,0:4:4.72:0,5,18	0/0:29,0:28:10.13:0,10,502	0/0:8,0:8:11.85:0,12,101	0/0:16,0:16:43.32:0,43,475	1/1:13,2:14:39.21:367,39,0	1/1:8,0:8:12.03:99,12,0	1/1:17,1:16:46.27:372,46,0	1/1:8,0:8:23.66:182,24,0	0/0:17,0:17:49.09:0,49,496	0/0:15,0:15:43.35:0,43,337	0/0:20,0:20:51.65:0,52,559	0/0:19,0:19:46.92:0,47,517	1/1:12,2:13:32.95:312,33,0	0/0:29,0:29:79.10:0,79,793	1/1:12,0:12:19.38:143,19,0	0/0:12,0:10:19.78:0,20,242	0/0:12,0:12:35.06:0,35,354	0/1:5,0:5:12.90:13,0,67	0/0:13,0:12:35.91:0,36,368	0/0:24,0:24:19.35:0,19,534	0/0:20,0:20:50.97:0,51,562	0/0:22,0:21:29.96:0,30,518	0/0:20,0:20:46.89:0,47,529	0/0:21,0:21:51.45:0,51,597	0/0:19,0:19:50.63:0,51,543
chr10	65972468	.	TC	T	516.19	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=0.116;DP=502;FS=0.000;HRun=6;HaplotypeScore=76.6982;InbreedingCoeff=0.9133;MQ=83.04;MQ0=0;MQRankSum=2.500;QD=18.44;ReadPosRankSum=-5.026;VQSLOD=2.3060;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,105,1334	0/0:4,0:4:9.03:0,9,118	0/0:25,0:23:18.34:0,18,306	0/0:20,0:17:13.54:0,14,185	0/0:19,0:19:57.19:0,57,748	0/0:15,0:15:39.13:0,39,512	0/0:12,0:12:32.83:0,33,390	1/1:7,21:28:63.05:611,63,0	0/0:8,0:8:24.08:0,24,312	0/0:23,0:23:66.21:0,66,858	0/0:12,0:12:35.48:0,35,442	0/0:19,0:19:54.11:0,54,688	0/0:13,0:13:39.11:0,39,492	0/0:17,0:17:51.13:0,51,638	0/0:15,0:15:42.05:0,42,474	0/0:15,0:15:45.08:0,45,566	0/0:23,0:23:57.06:0,57,707	0/0:22,0:22:54.07:0,54,668	0/0:14,0:14:39.08:0,39,471	0/0:16,0:16:48.13:0,48,613	0/0:7,0:7:21.07:0,21,276	0/0:15,0:15:37.35:0,37,464	0/0:28,0:28:81.18:0,81,986	0/0:11,0:11:33.08:0,33,404	0/0:18,0:17:44.92:0,45,550	0/0:22,0:22:62.24:0,62,771	0/0:30,0:30:90.23:0,90,1122	0/0:14,0:14:41.99:0,42,479
chr10	65972562	.	TTGGGG	T	679.39	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.136;DP=544;FS=3.991;HRun=0;HaplotypeScore=106.2871;InbreedingCoeff=0.9621;MQ=75.68;MQ0=0;MQRankSum=-5.821;QD=37.74;ReadPosRankSum=0.340;VQSLOD=3.5948;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,99,2905	0/0:9,0:9:24.08:0,24,713	0/0:11,0:11:30.07:0,30,616	0/0:26,0:25:53.69:0,54,1201	0/0:19,0:19:48.16:0,48,1355	0/0:16,0:16:42.14:0,42,1248	0/0:26,0:26:69.23:0,69,2050	0/0:32,0:32:84.26:0,84,2363	0/0:13,0:13:33.11:0,33,965	0/0:17,0:17:39.13:0,39,1106	0/0:5,0:5:12.04:0,12,353	0/0:19,0:19:51.16:0,51,1402	0/0:16,0:16:39.13:0,39,1158	0/0:23,0:23:63.22:0,63,1856	0/0:23,0:22:60.21:0,60,1780	0/0:11,0:11:27.09:0,27,797	0/0:34,0:34:87.28:0,87,2435	1/1:3,15:18:39.13:774,39,0	0/0:16,0:15:36.12:0,36,990	0/0:22,0:22:60.21:0,60,1700	0/0:24,0:24:72.25:0,72,2131	0/0:11,0:11:30.10:0,30,886	0/0:12,0:12:21.07:0,21,554	0/0:30,0:30:84.29:0,84,2491	0/0:13,0:13:39.13:0,39,1107	0/0:19,0:19:45.15:0,45,1300	0/0:27,0:27:78.27:0,78,2294	0/0:15,0:15:45.15:0,45,1336
chr10	65972793	.	C	CGAGCAGCA	10163.67	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-5.985;DP=613;FS=5.361;HRun=0;HaplotypeScore=151.8003;InbreedingCoeff=0.9753;MQ=83.57;MQ0=0;MQRankSum=-12.234;QD=82.63;ReadPosRankSum=-1.597;VQSLOD=4.8528;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,126,3100	0/0:3,0:3:6.02:0,6,166	0/0:25,0:25:60.17:0,60,1441	0/0:19,0:20:47.92:0,48,988	0/0:23,0:23:60.20:0,60,1582	0/0:25,0:25:72.25:0,72,1982	0/0:19,0:19:48.16:0,48,1285	1/1:14,12:31:75.23:2584,75,0	1/1:7,12:20:42.14:1823,42,0	1/1:3,15:20:57.20:2111,57,0	1/1:6,6:13:15.05:647,15,0	0/0:18,0:18:54.19:0,54,1463	0/0:15,0:15:42.14:0,42,1119	0/0:20,0:20:54.19:0,54,1487	0/0:21,0:21:57.18:0,57,1477	1/1:6,16:23:45.15:1894,45,0	0/0:38,0:38:99:0,108,2875	1/1:10,4:15:27.09:1106,27,0	0/0:11,0:11:27.09:0,27,681	0/0:13,0:13:39.13:0,39,1048	0/0:38,0:38:99:0,102,2676	0/0:23,0:23:66.21:0,66,1771	0/0:28,0:28:78.27:0,78,2124	0/0:27,0:27:78.27:0,78,2161	0/0:16,0:16:39.10:0,39,1019	0/0:26,0:25:60.20:0,60,1561	0/0:25,0:25:66.23:0,66,1795	0/0:12,0:12:33.10:0,33,855
chr10	65973091	.	GA	G	1826.21	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=10.099;DP=698;FS=15.234;HRun=8;HaplotypeScore=68.7881;InbreedingCoeff=0.9997;MQ=82.85;MQ0=0;MQRankSum=-2.425;QD=21.74;ReadPosRankSum=2.145;VQSLOD=2.7005;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:87.27:0,87,1051	0/0:14,0:14:36.11:0,36,435	0/0:24,0:24:53.76:0,54,585	0/0:16,0:16:28.63:0,29,322	0/0:27,0:27:78.23:0,78,932	0/0:25,0:25:72.21:0,72,860	0/0:20,0:20:57.15:0,57,667	0/0:37,0:36:96.29:0,96,1160	0/0:26,0:26:75.23:0,75,906	1/1:4,26:30:71.90:695,72,0	1/1:2,23:25:63.10:608,63,0	0/0:25,0:25:72.21:0,72,857	0/0:21,0:21:54.17:0,54,652	0/0:19,0:19:57.17:0,57,688	0/0:22,0:22:66.20:0,66,797	1/1:5,24:29:69.10:666,69,0	0/0:28,0:28:72.16:0,72,841	0/0:20,0:20:57.17:0,57,688	0/0:24,0:24:72.21:0,72,860	0/0:22,0:22:63.17:0,63,740	0/0:25,0:26:78.06:0,78,909	0/0:31,0:31:84.26:0,84,1015	0/0:28,0:28:84.20:0,84,986	0/0:23,0:23:66.16:0,66,778	0/0:19,0:19:54.15:0,54,641	0/0:42,1:43:82.34:0,82,1255	0/0:29,0:29:87.27:0,87,1050	0/0:14,0:14:42.13:0,42,507
chr10	65975436	.	T	TC	474.46	PASS	AC=6;AF=0.115;AN=52;BaseQRankSum=0.166;DP=365;FS=22.694;HRun=1;HaplotypeScore=53.0343;InbreedingCoeff=0.9169;MQ=36.17;MQ0=63;MQRankSum=-0.955;QD=18.98;ReadPosRankSum=-0.884;VQSLOD=2.1990;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:18:44.87:0,45,456	0/0:6,0:4:11.96:0,12,117	./.	./.	0/0:20,0:16:36.03:0,36,426	0/0:16,0:14:30.08:0,30,363	0/0:15,0:12:35.98:0,36,406	0/0:22,0:22:53.80:0,54,614	0/0:21,0:19:51.11:0,51,591	1/1:1,8:8:21.05:265,21,0	1/1:3,6:7:15.05:213,15,0	0/0:13,0:10:23.70:0,24,239	0/0:11,0:8:18.04:0,18,206	0/0:13,0:11:30.08:0,30,358	0/0:15,0:15:39.12:0,39,484	1/1:3,4:4:9.03:128,9,0	0/0:23,0:15:39:0,39,423	0/0:19,0:12:27.05:0,27,330	0/0:18,0:18:50.96:0,51,573	0/0:7,0:3:9.03:0,9,116	0/0:12,0:10:21.06:0,21,258	0/0:8,0:8:18.06:0,18,227	0/0:12,0:11:27.05:0,27,300	0/0:16,0:10:17.99:0,18,211	0/0:11,0:8:24.03:0,24,264	0/0:19,0:18:39.12:0,39,486	0/0:12,0:12:27.07:0,27,334	0/0:9,0:6:12.02:0,12,140
chr10	65976857	.	T	TG	21065.74	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=-17.048;DP=733;FS=13.177;HRun=1;HaplotypeScore=63.2961;InbreedingCoeff=0.9996;MQ=82.17;MQ0=0;MQRankSum=-6.319;QD=41.55;ReadPosRankSum=0.719;VQSLOD=4.1569;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:50:99:0,150,1930	1/1:0,8:8:24.08:360,24,0	0/0:36,0:36:89.93:0,90,1186	0/0:20,0:20:52.83:0,53,663	0/0:25,0:25:75.23:0,75,959	1/1:1,26:27:72.24:1078,72,0	1/1:0,40:40:99:1484,99,0	1/1:2,28:30:84.28:1257,84,0	1/1:0,25:25:72.24:1079,72,0	1/1:1,29:30:87.29:1301,87,0	1/1:0,21:21:60.20:898,60,0	1/1:0,34:34:90.26:1324,90,0	0/0:33,0:33:99:0,99,1254	1/1:1,22:23:66.22:989,66,0	1/1:1,27:29:81.25:1192,81,0	1/1:1,22:23:60.20:899,60,0	1/1:0,38:38:99:1610,108,0	1/1:0,22:22:63.13:916,63,0	1/1:3,16:19:54.18:803,54,0	1/1:1,18:19:54.18:801,54,0	1/1:0,26:26:69.23:1034,69,0	1/1:0,20:20:60.20:899,60,0	0/0:26,0:26:75.23:0,75,959	0/0:35,0:35:99:0,99,1285	1/1:0,11:11:33.11:494,33,0	1/1:0,25:25:75.25:1122,75,0	1/1:0,21:21:57.19:853,57,0	1/1:1,15:16:45.15:674,45,0
chr10	65977614	.	G	GAC	2386.42	PASS	AB=0.857;AC=20;AF=0.357;AN=56;BaseQRankSum=4.616;DP=568;FS=0.950;HRun=0;HaplotypeScore=127.6780;InbreedingCoeff=-0.2112;MQ=50.07;MQ0=24;MQRankSum=2.670;QD=6.25;ReadPosRankSum=-0.925;VQSLOD=3.3197;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:50:99:0,126,1799	1/1:11,2:12:4.65:221,5,0	0/0:4,0:3:3.01:0,3,43	0/0:11,0:4:9.02:0,9,111	0/0:17,0:16:42.13:0,42,578	0/1:11,15:25:13.13:68,0,13	0/1:29,2:29:38.36:217,0,38	0/1:32,0:30:8.20:8,0,660	0/0:18,0:19:17:0,17,264	0/1:20,0:18:5.13:5,0,407	0/0:15,0:13:6.36:0,6,66	0/1:19,4:21:22.82:257,0,23	0/0:20,0:20:54.07:0,54,734	0/1:15,1:16:21.47:106,0,21	0/1:13,5:18:20.97:220,0,21	0/0:14,0:12:19.16:0,19,143	0/1:22,2:22:51.30:72,0,51	0/1:7,7:14:26.78:78,0,27	0/1:18,1:17:75.26:75,0,210	0/1:15,0:13:1.22:104,0,1	0/1:14,14:24:20.35:93,0,20	1/1:14,0:12:6.57:36,7,0	0/0:10,0:10:18.06:0,18,258	0/0:25,0:25:71.05:0,71,987	0/1:27,7:32:16.26:297,0,16	0/1:24,1:22:7.66:386,0,8	0/1:19,3:21:78.62:146,0,79	0/1:4,3:7:5.07:159,0,5
chr10	65977616	.	CAG	C	2864.42	PASS	AB=0.960;AC=24;AF=0.429;AN=56;BaseQRankSum=2.554;DP=571;FS=3.564;HRun=0;HaplotypeScore=121.0836;InbreedingCoeff=-0.1248;MQ=49.95;MQ0=24;MQRankSum=1.043;QD=6.90;ReadPosRankSum=-4.806;VQSLOD=2.3469;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:48:99:0,126,2248	0/1:12,1:12:4.27:132,0,4	0/0:2,0:1:2.98:0,3,22	0/0:10,1:4:9.02:0,9,138	0/0:16,0:15:41.15:0,41,631	1/1:25,0:24:7.73:203,8,0	1/1:31,0:29:14.69:451,15,0	0/1:33,0:31:16.86:17,0,796	0/0:19,0:19:23.71:0,24,339	0/1:21,1:20:83.24:83,0,596	0/1:15,0:13:25.51:26,0,90	0/1:23,0:21:23.86:263,0,24	0/0:20,0:20:56.34:0,56,943	0/1:15,1:16:5.42:170,0,5	0/1:18,0:18:9.18:236,0,9	0/1:15,0:13:40.39:40,0,209	0/1:6,17:21:17.58:90,0,18	0/1:13,0:13:17.71:49,0,18	0/1:19,0:17:33.01:33,0,226	1/1:15,0:13:8.37:61,8,0	0/1:30,0:25:32.59:90,0,33	0/1:15,0:13:0.33:98,0,0	0/0:12,0:12:21.04:0,21,352	0/0:27,0:27:72.19:0,72,1247	1/1:33,1:32:34.36:421,34,0	0/1:25,0:22:43.19:339,0,43	0/1:22,1:22:75.64:190,0,76	0/1:7,0:7:17.62:46,0,18
chr10	65978972	.	C	CA	5331.88	PASS	AB=0.943;AC=11;AF=0.196;AN=56;BaseQRankSum=-9.650;DP=726;FS=3.748;HRun=1;HaplotypeScore=141.4497;InbreedingCoeff=0.9246;MQ=80.83;MQ0=2;MQRankSum=0.638;QD=32.91;ReadPosRankSum=-0.093;VQSLOD=4.4037;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,126,1591	0/0:16,0:16:48.13:0,48,554	0/0:24,0:23:40.35:0,40,711	0/0:18,0:18:35.76:0,36,422	0/0:32,0:32:96.28:0,96,1214	0/0:18,0:18:45.12:0,45,520	0/0:35,0:35:99:0,99,1180	1/1:1,22:23:66.21:970,66,0	1/1:1,25:26:69.23:1033,69,0	1/1:0,24:24:69.23:1033,69,0	1/1:1,31:32:81.27:1213,81,0	0/0:22,0:22:60.17:0,60,708	0/0:28,0:28:81.25:0,81,1035	0/0:30,0:30:81.21:0,81,929	0/0:22,0:22:57.16:0,57,660	1/1:0,24:24:72.24:1079,72,0	0/0:39,0:38:87.14:0,87,1002	0/0:28,0:28:81.26:0,81,1052	0/0:18,0:18:51.14:0,51,600	0/0:21,0:20:47.79:0,48,547	0/0:38,0:37:84:0,84,984	0/0:21,0:21:48.14:0,48,576	0/0:22,0:22:57.16:0,57,710	0/0:32,0:32:87.28:0,87,1129	0/0:22,0:22:60.17:0,60,704	0/1:31,2:33:2.69:3,0,887	0/0:20,0:20:54.16:0,54,632	0/0:16,0:16:48.13:0,48,562
chr10	65978974	.	TGAGG	T	14191.20	PASS	AB=0.550;AC=29;AF=0.518;AN=56;BaseQRankSum=2.134;DP=734;FS=0.618;HRun=0;HaplotypeScore=151.5590;InbreedingCoeff=0.9282;MQ=81.17;MQ0=2;MQRankSum=-4.454;QD=38.35;ReadPosRankSum=5.506;VQSLOD=5.1555;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,120,2974	1/1:1,15:16:42.14:725,42,0	0/0:25,0:24:52.98:0,53,1125	0/0:18,0:18:26.29:0,26,706	0/0:32,0:32:78.25:0,78,1914	1/1:1,16:17:42.14:742,42,0	1/1:7,28:35:78.27:1378,78,0	0/0:24,0:24:60.21:0,60,1477	0/0:28,0:28:66.21:0,66,1552	0/0:23,0:23:54.19:0,54,1330	0/0:32,0:32:69.10:0,69,1614	1/1:3,18:22:51.17:901,51,0	0/0:31,0:31:90.31:0,90,2279	1/1:5,25:30:69.24:1215,69,0	1/1:0,22:22:57.20:1007,57,0	0/0:27,0:27:81.28:0,81,2002	1/1:2,37:38:84.29:1468,84,0	0/0:28,0:28:75.21:0,75,1788	1/1:5,13:18:36.12:630,36,0	1/1:4,17:20:39.07:687,39,0	1/1:5,34:38:72.72:1269,73,0	1/1:6,15:21:30.10:530,30,0	0/0:21,0:21:51.13:0,51,1188	0/0:32,0:32:75.26:0,75,1891	1/1:2,19:21:51.17:901,51,0	0/1:6,27:33:71.89:1186,0,72	1/1:3,17:20:45.15:795,45,0	1/1:1,15:16:45.09:760,45,0
chr10	65979912	.	AT	A	648.16	PASS	AB=0.779;AC=5;AF=0.089;AN=56;BaseQRankSum=7.966;DP=833;FS=3.522;HRun=1;HaplotypeScore=102.7265;InbreedingCoeff=-0.0960;MQ=75.32;MQ0=0;MQRankSum=-6.300;QD=4.53;ReadPosRankSum=-2.986;VQSLOD=-0.6426;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:66,0:66:99:0,196,3109	0/0:19,0:19:54.11:0,54,849	0/0:35,0:30:76.08:0,76,1148	0/0:46,0:44:99:0,111,1691	0/0:29,0:29:87.30:0,87,1386	0/0:30,0:30:90.28:0,90,1389	0/0:28,0:28:81.28:0,81,1293	0/1:22,12:32:99:325,0,852	0/1:13,0:25:80.36:80,0,211	0/1:21,11:33:99:331,0,872	0/1:13,8:21:14.90:15,0,292	0/0:31,0:31:93.30:0,93,1462	0/0:30,0:30:90.29:0,90,1412	0/0:23,0:23:69.24:0,69,1095	0/0:35,0:35:99:0,105,1628	0/1:15,13:28:11.80:12,0,353	0/0:16,1:17:47.40:0,47,740	0/0:21,0:21:40.69:0,41,470	0/0:18,0:18:54.18:0,54,847	0/0:23,0:23:69.24:0,69,1096	0/0:39,0:39:99:0,117,1856	0/0:28,0:28:84.29:0,84,1341	0/0:38,0:38:99:0,108,1724	0/0:26,0:26:78.27:0,78,1247	0/0:38,2:40:99:0,114,1822	0/0:25,0:25:69.23:0,69,1103	0/0:30,0:30:90.30:0,90,1403	0/0:13,0:13:39.13:0,39,623
chr10	65979913	.	T	TG	313.32	PASS	AB=0.818;AC=2;AF=0.036;AN=56;BaseQRankSum=5.600;DP=831;FS=7.693;HRun=0;HaplotypeScore=106.2658;InbreedingCoeff=-0.0372;MQ=74.31;MQ0=0;MQRankSum=-6.898;QD=6.53;ReadPosRankSum=-2.538;VQSLOD=2.5407;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:67,0:67:99:0,196,2725	0/0:19,0:19:54.15:0,54,728	0/0:33,0:29:75.09:0,75,969	0/0:45,0:43:99:0,109,1447	0/0:29,0:29:87.29:0,87,1216	0/0:28,0:28:84.27:0,84,1157	0/0:28,0:28:81.27:0,81,1131	0/0:35,0:33:38.32:0,38,811	0/1:27,0:25:99:144,0,182	0/0:32,0:32:56.53:0,57,861	0/0:22,0:22:23.21:0,23,256	0/0:30,0:31:93.23:0,93,1276	0/0:30,0:30:90.23:0,90,1232	0/0:23,0:23:69.23:0,69,957	0/0:33,0:33:99:0,99,1384	0/0:29,0:29:25.62:0,26,324	0/0:16,0:16:45.15:0,45,629	0/1:9,12:21:99:258,0,324	0/0:19,0:19:57.18:0,57,781	0/0:23,0:23:69.20:0,69,930	0/0:39,0:39:99:0,117,1609	0/0:28,0:28:84.28:0,84,1174	0/0:38,0:38:99:0,108,1508	0/0:27,0:27:78.26:0,78,1091	0/0:40,0:40:99:0,114,1594	0/0:25,0:25:69.23:0,69,964	0/0:29,0:30:90.25:0,90,1229	0/0:13,0:13:39.13:0,39,545
chr10	65980212	.	CGTT	C	903.71	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.790;DP=706;FS=1.680;HRun=0;HaplotypeScore=96.5435;InbreedingCoeff=0.9971;MQ=87.83;MQ0=0;MQRankSum=-1.506;QD=37.65;ReadPosRankSum=0.617;VQSLOD=4.0498;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,157,3419	0/0:12,0:12:33.11:0,33,747	0/0:29,0:28:52.55:0,53,1071	0/0:24,0:24:35.05:0,35,1072	0/0:13,0:13:36.11:0,36,771	0/0:21,0:21:63.19:0,63,1337	0/0:20,0:20:60.21:0,60,1337	0/0:28,0:28:75.25:0,75,1608	0/0:16,0:16:45.15:0,45,1019	0/0:27,0:27:78.25:0,78,1653	0/0:9,0:9:24:0,24,444	0/0:25,0:25:75.26:0,75,1656	0/0:20,0:20:60.21:0,60,1287	0/0:23,0:23:66.21:0,66,1434	0/0:28,0:28:78.27:0,78,1689	0/0:24,0:24:69.19:0,69,1423	0/0:30,0:30:81.22:0,81,1641	1/1:0,24:24:60.21:999,60,0	0/0:24,0:24:72.24:0,72,1565	0/0:21,0:21:63.20:0,63,1362	0/0:29,0:29:87.26:0,87,1804	0/0:33,0:33:96.30:0,96,2046	0/0:25,0:25:75.26:0,75,1644	0/0:37,0:37:99:0,102,2216	0/0:21,0:21:60.21:0,60,1357	0/0:37,0:37:99:0,105,2186	0/0:41,0:40:99:0,123,2737	0/0:12,0:12:33.10:0,33,632
chr10	65981128	.	GACAC	G	9084.43	PASS	AB=0.581;AC=34;AF=0.607;AN=56;BaseQRankSum=4.030;DP=799;FS=7.494;HRun=0;HaplotypeScore=149.2004;InbreedingCoeff=0.5488;MQ=73.72;MQ0=12;MQRankSum=-1.172;QD=19.66;ReadPosRankSum=1.816;VQSLOD=3.9079;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:50:80.19:0,80,1628	1/1:2,8:12:24.07:351,24,0	0/0:45,0:27:20.17:0,20,171	0/0:61,0:40:24.79:0,25,402	0/0:33,0:38:83.22:0,83,1618	1/1:5,5:10:6.02:98,6,0	1/1:7,19:26:22.13:527,22,0	0/0:41,1:42:56.31:0,56,1171	0/1:7,2:24:66.43:66,0,94	0/1:11,4:36:99:124,0,192	0/1:5,1:20:51.59:55,0,52	1/1:2,21:24:42.08:636,42,0	0/0:27,2:29:26.09:0,26,1630	1/1:3,19:26:41.55:759,42,0	1/1:6,12:19:33.10:498,33,0	0/1:7,5:17:71.60:206,0,72	1/1:11,20:31:38.85:774,39,0	0/1:5,1:20:16.69:17,0,110	1/1:11,9:19:15.80:417,16,0	1/1:4,18:23:48.16:765,48,0	1/1:8,16:25:11.15:438,11,0	1/1:9,23:35:66.20:995,66,0	0/0:30,0:33:68.70:0,69,1426	0/0:35,0:38:71.55:0,72,1562	1/1:3,18:22:33.11:519,33,0	1/1:10,15:26:11.83:631,12,0	0/1:5,17:26:3.02:672,0,3	1/1:2,12:15:36.03:536,36,0
chr10	65981452	.	C	CAA	7859.99	PASS	AB=0.862;AC=35;AF=0.625;AN=56;BaseQRankSum=7.126;DP=596;FS=0.746;HRun=11;HaplotypeScore=116.2660;InbreedingCoeff=0.7581;MQ=76.43;MQ0=0;MQRankSum=-1.908;QD=21.07;ReadPosRankSum=-1.910;VQSLOD=3.6642;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:65.94:0,66,633	1/1:3,7:11:24.08:333,24,0	0/1:14,0:14:2.49:2,0,150	0/1:15,0:16:0.86:1,0,112	0/0:31,0:31:70.31:0,70,694	1/1:1,10:14:31.39:375,31,0	1/1:3,11:15:3.49:371,3,0	0/0:11,0:29:42.90:0,43,187	1/1:4,18:24:33.05:439,33,0	0/0:26,0:27:59.74:0,60,564	0/0:19,0:19:41.95:0,42,407	1/1:11,6:18:50.60:646,51,0	0/0:30,0:30:65.98:0,66,628	1/1:5,8:15:8.52:93,9,0	1/1:3,17:21:42.14:608,42,0	0/0:21,0:21:51.03:0,51,489	1/1:9,15:26:18.05:522,18,0	1/1:5,15:20:17.88:584,18,0	0/1:5,10:17:13.90:423,0,14	1/1:5,17:26:33.41:656,33,0	1/1:1,10:11:18.06:261,18,0	1/1:5,12:19:35.05:415,35,0	0/0:23,0:23:66.09:0,66,635	0/0:12,0:12:1.11:0,1,207	1/1:4,16:28:54.05:577,54,0	1/1:7,4:20:7.89:284,8,0	1/1:10,24:40:64.63:813,65,0	1/1:2,10:17:16.95:459,17,0
chr10	65981948	.	GA	G	5762.86	PASS	AB=0.533;AC=29;AF=0.518;AN=56;BaseQRankSum=11.182;DP=537;FS=6.015;HRun=9;HaplotypeScore=87.6147;InbreedingCoeff=0.9276;MQ=67.57;MQ0=0;MQRankSum=0.885;QD=21.66;ReadPosRankSum=2.568;VQSLOD=5.6013;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,121,1374	1/1:1,7:8:21.01:192,21,0	0/0:15,0:12:18.39:0,18,173	0/0:12,0:11:24.38:0,24,202	0/0:25,0:25:60.18:0,60,692	1/1:3,21:24:60.03:549,60,0	1/1:2,16:18:39.02:357,39,0	0/0:24,0:24:57.17:0,57,658	0/0:19,0:19:48.07:0,48,518	0/0:14,1:15:5.64:0,6,319	0/0:18,0:18:39.10:0,39,440	1/1:3,9:12:17.99:165,18,0	0/0:17,0:17:48.13:0,48,543	1/1:0,14:14:36.02:329,36,0	1/1:0,20:20:54.03:494,54,0	0/0:15,0:16:7.70:0,8,382	1/1:0,20:20:54:488,54,0	0/0:16,0:16:42.12:0,42,485	1/1:6,21:27:62.98:564,63,0	1/1:5,21:26:60:543,60,0	1/1:3,19:22:45.02:412,45,0	0/1:2,14:16:1.62:242,0,2	0/0:21,0:21:57.17:0,57,658	0/0:26,0:26:75.22:0,75,863	1/1:1,18:19:51.03:467,51,0	1/1:2,14:16:42.02:384,42,0	1/1:3,15:18:45.02:412,45,0	1/1:0,6:6:18.01:165,18,0
chr10	65983043	.	CT	C	292.51	PASS	AB=0.806;AC=8;AF=0.143;AN=56;BaseQRankSum=0.444;DP=507;FS=2.047;HRun=15;HaplotypeScore=119.2995;InbreedingCoeff=0.3380;MQ=69.33;MQ0=0;MQRankSum=6.915;QD=2.34;ReadPosRankSum=3.659;VQSLOD=0.1852;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,2:32:17.95:0,18,402	0/0:7,0:7:14.34:0,14,86	0/1:20,1:15:19.24:19,0,37	0/0:10,0:8:5.04:0,5,32	0/1:16,2:20:13.64:14,0,152	0/0:21,0:21:50.64:0,51,288	0/0:14,0:14:12.87:0,13,70	1/1:14,1:33:31:100,31,0	0/0:23,0:23:52.46:0,52,310	1/1:8,9:17:22.76:152,23,0	0/1:8,4:13:14.63:34,0,15	0/0:17,0:17:37.11:0,37,210	0/0:14,0:15:0.94:0,1,149	0/0:17,0:17:24.29:0,24,124	0/0:17,0:17:32.64:0,33,171	0/1:9,12:21:56.81:119,0,57	0/0:22,0:21:27.21:0,27,145	0/0:8,0:8:12.68:0,13,77	0/0:24,0:22:43.03:0,43,260	0/0:24,0:24:46.37:0,46,273	0/0:3,0:3:5.74:0,6,30	0/0:10,0:10:12.31:0,12,61	0/0:22,2:26:37.30:0,37,287	0/0:26,0:25:50.96:0,51,437	0/0:14,0:14:27.21:0,27,146	0/0:19,0:18:36.05:0,36,221	0/0:24,0:23:35.03:0,35,205	0/0:9,0:7:17.42:0,17,103
chr10	65983998	.	CT	C	3010.03	PASS	AB=0.696;AC=36;AF=0.643;AN=56;BaseQRankSum=5.924;DP=575;FS=21.440;HRun=14;HaplotypeScore=100.2137;InbreedingCoeff=0.6582;MQ=68.78;MQ0=12;MQRankSum=1.051;QD=7.70;ReadPosRankSum=3.202;VQSLOD=0.9581;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:40,2:43:22.96:0,23,716	0/1:2,1:3:11.57:12,0,47	0/0:31,0:15:11.68:0,12,91	0/0:19,0:9:14.96:0,15,98	0/0:20,2:22:17.63:0,18,396	1/1:3,19:23:39.52:258,40,0	0/1:9,7:16:43.96:156,0,44	1/1:10,0:28:22.38:71,22,0	0/1:6,0:20:5.18:35,0,5	1/1:11,1:22:25.13:85,25,0	1/1:8,0:27:16.64:91,17,0	1/1:3,8:10:17.77:123,18,0	0/0:17,0:18:29.59:0,30,243	0/1:6,3:9:32.24:85,0,32	1/1:13,10:22:16.07:247,16,0	1/1:5,1:24:26.65:93,27,0	1/1:16,11:26:8.95:333,9,0	0/0:19,0:20:50.07:0,50,431	1/1:8,8:16:32.43:188,32,0	1/1:8,16:23:41.99:287,42,0	1/1:4,5:8:17.84:123,18,0	1/1:4,10:14:23.73:163,24,0	0/0:18,0:18:34.27:0,34,306	0/0:13,0:13:16.26:0,16,141	1/1:7,16:22:2.99:208,3,0	1/1:12,20:33:24.52:303,25,0	1/1:7,13:22:15.92:217,16,0	1/1:2,9:12:20.86:140,21,0
chr10	65984121	.	T	TC	14474.27	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=-4.484;DP=495;FS=3.262;HRun=1;HaplotypeScore=62.7961;InbreedingCoeff=0.9911;MQ=83.12;MQ0=0;MQRankSum=-3.604;QD=41.24;ReadPosRankSum=1.459;VQSLOD=5.5219;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,105,1417	1/1:0,5:5:15.05:235,15,0	0/0:17,0:17:30.22:0,30,513	0/0:16,0:16:37.69:0,38,407	0/0:20,0:20:57.16:0,57,761	1/1:1,21:22:57.19:891,57,0	1/1:1,10:11:30.10:469,30,0	1/1:0,26:25:75.19:1061,75,0	1/1:0,16:16:45.15:703,45,0	1/1:0,25:25:75.24:1150,75,0	1/1:1,16:17:45.15:704,45,0	1/1:0,11:11:30.10:469,30,0	0/0:19,0:19:57.18:0,57,781	1/1:1,12:13:33.11:516,33,0	1/1:0,16:16:36.12:563,36,0	1/1:2,18:20:42.14:647,42,0	1/1:0,26:26:69.23:1078,69,0	1/1:1,13:14:42.07:622,42,0	1/1:0,18:19:57.16:843,57,0	1/1:1,16:17:45.03:638,45,0	1/1:0,18:18:51.17:798,51,0	1/1:0,14:14:33.11:516,33,0	0/0:13,0:13:39.13:0,39,545	0/0:23,0:23:66.18:0,66,886	1/1:0,18:18:48.16:750,48,0	1/1:0,22:22:63.18:960,63,0	1/1:0,17:17:45.10:675,45,0	1/1:0,4:4:12.04:188,12,0
chr10	65984186	.	AGAGAGG	A	1921.94	PASS	AB=1.000;AC=10;AF=0.179;AN=56;BaseQRankSum=-0.060;DP=586;FS=7.753;HRun=0;HaplotypeScore=166.9002;InbreedingCoeff=0.8055;MQ=56.82;MQ0=27;MQRankSum=-5.174;QD=13.07;ReadPosRankSum=1.376;VQSLOD=2.5800;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:27:66.16:0,66,1772	0/0:7,0:7:15.04:0,15,352	0/0:37,0:22:22.39:0,22,399	0/1:57,0:16:0.76:1,0,30	0/0:23,0:22:48.14:0,48,1317	0/0:21,0:21:39.61:0,40,1193	0/0:15,0:15:27.08:0,27,690	1/1:8,10:17:18:220,18,0	0/0:14,0:14:21.07:0,21,573	1/1:16,7:22:32.14:574,32,0	1/1:9,6:14:17.17:338,17,0	0/0:18,0:17:36.11:0,36,1060	0/0:23,0:21:39.08:0,39,918	0/0:16,0:14:27.09:0,27,830	0/0:18,0:17:30.10:0,30,827	1/1:10,13:22:51.08:916,51,0	0/0:33,0:30:57.19:0,57,1659	0/1:11,0:10:9.62:36,0,10	0/0:17,0:14:21.06:0,21,524	0/0:18,0:17:17.83:0,18,551	0/0:26,0:25:48.15:0,48,1275	0/0:22,0:21:39.12:0,39,1096	0/0:16,0:16:33.10:0,33,839	0/0:23,0:23:51.11:0,51,1387	0/0:13,0:13:30.05:0,30,701	0/0:19,0:19:30.05:0,30,748	0/0:18,0:17:30.10:0,30,918	0/0:13,0:13:30.10:0,30,823
chr10	65984198	.	G	GGA	175	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.098;DP=609;FS=13.216;HRun=0;HaplotypeScore=139.1504;InbreedingCoeff=0.9588;MQ=56.01;MQ0=25;MQRankSum=-2.247;QD=13.46;ReadPosRankSum=-2.737;VQSLOD=2.3184;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:84.25:0,84,1120	0/0:9,0:9:24.08:0,24,329	0/0:37,0:21:49.52:0,50,569	0/0:43,0:13:20.44:0,20,256	0/0:24,0:23:36.24:0,36,742	0/0:21,0:21:51.16:0,51,700	0/0:18,0:18:45.07:0,45,577	0/0:28,0:27:48.84:0,49,486	0/0:14,0:14:30.08:0,30,395	0/0:21,0:20:42.64:0,43,299	0/0:18,0:17:24.11:0,24,176	0/0:17,0:16:45.10:0,45,594	0/0:20,0:18:48.12:0,48,624	0/0:16,0:14:38.83:0,39,502	0/0:21,0:20:48.14:0,48,626	0/0:26,0:25:63.59:0,64,492	0/0:32,0:29:56.09:0,56,934	1/1:8,5:12:12.08:261,12,0	0/0:16,0:14:30.56:0,31,396	0/0:19,0:18:36.22:0,36,455	0/0:25,0:24:61.43:0,61,809	0/0:20,0:19:54.18:0,54,735	0/0:19,0:19:51.12:0,51,636	0/0:23,0:23:63.17:0,63,843	0/0:19,0:19:54.10:0,54,679	0/0:22,0:22:54.17:0,54,726	0/0:21,0:19:48.16:0,48,651	0/0:16,0:16:36.12:0,36,491
chr10	65984369	.	GT	G	14127.87	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=17.807;DP=616;FS=0.000;HRun=2;HaplotypeScore=164.1149;InbreedingCoeff=0.9764;MQ=78.54;MQ0=1;MQRankSum=-5.370;QD=32.11;ReadPosRankSum=4.319;VQSLOD=4.2610;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:44:99:0,135,2019	1/1:0,11:11:30.09:371,30,0	0/0:20,0:20:56.77:0,57,791	0/0:23,0:23:63.19:0,63,902	0/0:14,0:14:42.14:0,42,629	1/1:1,25:26:66.21:817,66,0	1/1:1,26:27:69.22:854,69,0	1/1:2,20:22:59.78:715,60,0	1/1:0,28:28:84.26:1040,84,0	1/1:1,16:16:45.14:557,45,0	1/1:2,13:14:33.10:408,33,0	1/1:3,25:28:69.22:854,69,0	0/0:26,0:26:72.24:0,72,1072	1/1:0,21:22:66.21:817,66,0	1/1:0,20:20:57.18:706,57,0	1/1:2,11:13:33.10:408,33,0	1/1:0,29:28:66.21:816,66,0	1/1:2,12:14:12.90:420,13,0	1/1:2,18:20:51.16:629,51,0	1/1:1,16:17:45.10:539,45,0	1/1:0,56:56:99:1672,135,0	1/1:0,15:15:39.12:482,39,0	0/0:17,0:17:51.16:0,51,745	0/0:31,0:31:93.29:0,93,1354	1/1:1,16:16:45.14:557,45,0	1/1:0,20:21:63.18:762,63,0	1/1:2,18:20:51.14:630,51,0	1/1:0,2:2:6.02:74,6,0
chr10	65984527	.	T	TA	8876.42	PASS	AB=0.533;AC=33;AF=0.589;AN=56;BaseQRankSum=4.459;DP=665;FS=2.294;HRun=10;HaplotypeScore=92.8064;InbreedingCoeff=0.9314;MQ=68.85;MQ0=0;MQRankSum=-4.271;QD=22.59;ReadPosRankSum=2.102;VQSLOD=5.3277;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,135,1097	1/1:3,4:7:12.03:128,12,0	0/0:21,0:19:16:0,16,195	0/0:8,0:6:8.97:0,9,70	0/0:27,0:27:59.87:0,60,486	1/1:3,23:27:62.99:654,63,0	1/1:6,18:24:48.12:512,48,0	0/0:23,0:25:43.95:0,44,351	1/1:1,21:23:57.11:596,57,0	0/0:34,0:36:81.89:0,82,643	0/0:23,0:24:55.93:0,56,449	1/1:6,19:25:27.02:488,27,0	0/0:21,0:22:49.76:0,50,388	1/1:3,27:30:66.17:703,66,0	1/1:1,15:16:17.46:391,17,0	0/0:22,0:22:53.89:0,54,440	1/1:6,32:38:40.96:846,41,0	1/1:2,12:14:30.08:320,30,0	1/1:9,17:26:7.86:490,8,0	1/1:6,18:24:35.43:557,35,0	1/1:2,15:17:32.87:333,33,0	1/1:6,23:29:41.48:632,41,0	0/0:13,0:13:32.94:0,33,268	0/0:24,0:24:53.93:0,54,443	0/1:2,14:16:1.16:400,0,1	1/1:7,25:32:50.49:723,50,0	1/1:4,17:21:36.09:384,36,0	1/1:1,22:24:69.01:718,69,0
chr10	65985149	.	C	CTGAGTTATACAG	44216.88	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=12.525;DP=509;FS=0.000;HRun=0;HaplotypeScore=242.6094;InbreedingCoeff=0.9801;MQ=68.40;MQ0=0;MQRankSum=-15.853;QD=123.86;ReadPosRankSum=-0.053;VQSLOD=4.7554;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,100,3458	1/1:1,3:4:12.04:728,12,0	0/0:14,0:14:30.52:0,31,828	0/0:22,0:22:59:0,59,1832	0/0:18,0:18:51.17:0,51,1758	1/1:13,14:27:75.07:3888,75,0	1/1:12,2:14:35.68:1524,36,0	1/1:41,0:41:99:4821,111,0	1/1:9,10:19:51.18:2978,51,0	1/1:11,6:17:51.11:2288,51,0	1/1:10,11:21:48.12:2352,48,0	1/1:10,5:15:38.81:1788,39,0	0/0:27,0:27:78.22:0,78,2540	1/1:9,10:20:56.94:2389,57,0	1/1:15,10:25:68.89:3156,69,0	1/1:13,14:27:63.12:3498,63,0	1/1:12,5:17:41.99:1515,42,0	1/1:3,3:6:9.03:550,9,0	1/1:9,3:11:24.06:1152,24,0	1/1:4,11:15:42.10:2398,42,0	1/1:10,3:13:24:759,24,0	1/1:8,5:13:30.02:1502,30,0	0/0:13,0:13:39.12:0,39,1238	0/0:20,0:20:60.21:0,60,2194	1/1:10,6:16:42:1920,42,0	1/1:7,6:13:33.11:1887,33,0	1/1:7,10:17:51.09:2506,51,0	1/1:2,3:5:15.03:620,15,0
chr10	65985158	.	G	GTCTCAA	13328.49	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=15.012;DP=365;FS=2.921;HRun=0;HaplotypeScore=182.8905;InbreedingCoeff=0.9417;MQ=83.93;MQ0=0;MQRankSum=-14.349;QD=65.66;ReadPosRankSum=2.993;VQSLOD=5.4317;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,105,2583	1/1:0,3:3:9.03:321,9,0	0/0:13,0:13:28.89:0,29,775	0/0:27,0:27:78.06:0,78,1694	0/0:21,0:21:63.20:0,63,1478	1/1:2,14:16:48.16:1602,48,0	1/1:2,2:4:12.04:313,12,0	1/1:3,0:20:53.35:378,53,0	1/1:2,10:12:36.11:1145,36,0	1/1:0,0:15:44.56:318,45,0	1/1:0,0:20:35.38:268,35,0	1/1:1,5:6:18.06:630,18,0	0/0:29,0:29:84.25:0,84,1951	1/1:0,11:11:30.10:1070,30,0	1/1:1,10:11:25.05:1058,25,0	1/1:0,0:17:44.12:307,44,0	1/1:1,5:6:12.04:429,12,0	1/1:0,3:3:9.03:321,9,0	1/1:1,3:4:12.04:404,12,0	1/1:1,10:11:33.11:1160,33,0	1/1:4,3:7:12.04:347,12,0	1/1:2,5:7:18.04:556,18,0	0/0:13,0:13:39.11:0,39,912	0/0:22,0:22:66.18:0,66,1596	1/1:1,6:7:18.06:643,18,0	1/1:1,6:7:21.06:675,21,0	1/1:1,10:11:30.08:1063,30,0	1/1:0,3:3:9.03:323,9,0
chr10	65985296	.	A	ACT	23931.88	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=-13.251;DP=719;FS=8.181;HRun=0;HaplotypeScore=82.0797;InbreedingCoeff=0.9995;MQ=79.45;MQ0=1;MQRankSum=-6.184;QD=42.58;ReadPosRankSum=2.585;VQSLOD=6.6418;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:96.26:0,96,1296	1/1:1,11:13:36.12:648,36,0	0/0:14,0:15:39.09:0,39,521	0/0:22,0:22:56.15:0,56,702	0/0:18,0:17:51.02:0,51,683	1/1:2,33:35:90.31:1647,90,0	1/1:0,22:23:54.19:989,54,0	1/1:1,28:29:81.13:1358,81,0	1/1:2,26:29:72.20:1317,72,0	1/1:2,27:30:84.26:1465,84,0	1/1:3,19:22:48.10:841,48,0	1/1:2,31:36:66.09:1204,66,0	0/0:21,0:21:57.17:0,57,776	1/1:1,26:27:60.21:1097,60,0	1/1:6,17:22:54.17:957,54,0	1/1:1,23:24:60.21:1098,60,0	1/1:2,27:29:59.87:1055,60,0	1/1:1,30:33:72.20:1318,72,0	1/1:2,13:18:44.75:625,45,0	1/1:0,19:19:42.14:769,42,0	1/1:5,73:78:99:3133,172,0	1/1:1,15:17:39.13:714,39,0	0/0:9,0:9:24.08:0,24,342	0/0:38,0:38:99:0,114,1632	1/1:0,24:24:66.23:1208,66,0	1/1:1,19:21:60.19:1063,60,0	1/1:1,13:14:39.13:711,39,0	1/1:0,18:18:39.13:715,39,0
chr10	65986728	.	C	CCTT	22447.91	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=-11.209;DP=670;FS=14.536;HRun=0;HaplotypeScore=93.5636;InbreedingCoeff=0.9810;MQ=74.97;MQ0=4;MQRankSum=-5.864;QD=49.23;ReadPosRankSum=2.169;VQSLOD=6.2912;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:87.28:0,87,1326	1/1:1,9:10:18.06:390,18,0	0/0:37,0:31:6.64:0,7,835	0/0:43,0:30:32.05:0,32,748	0/0:24,0:24:54.18:0,54,840	1/1:1,23:26:63.22:1362,63,0	1/1:2,24:27:54.10:1071,54,0	1/1:6,16:23:51.17:1062,51,0	1/1:3,26:30:72.25:1556,72,0	1/1:8,30:38:93.30:1914,93,0	1/1:1,16:17:42.01:773,42,0	1/1:0,19:17:39.13:834,39,0	0/0:20,0:20:57.18:0,57,871	1/1:2,11:13:30.10:637,30,0	1/1:2,24:26:63.22:1362,63,0	1/1:2,25:27:69.24:1492,69,0	1/1:3,14:17:33.11:708,33,0	1/1:2,12:14:33.11:687,33,0	1/1:6,10:16:30.09:595,30,0	1/1:1,13:14:39.05:703,39,0	1/1:2,32:34:87.26:1838,87,0	1/1:3,18:22:54.03:1018,54,0	0/0:22,0:22:57.19:0,57,889	0/0:36,0:36:99:0,99,1491	1/1:0,19:21:57.11:1140,57,0	1/1:3,23:26:69.24:1490,69,0	1/1:3,17:20:51.18:1099,51,0	1/1:4,12:16:33.11:714,33,0
chr10	65986821	.	CACAG	C	3570.08	PASS	AB=0.880;AC=26;AF=0.464;AN=56;BaseQRankSum=9.219;DP=721;FS=14.834;HRun=0;HaplotypeScore=173.3676;InbreedingCoeff=0.7172;MQ=58.46;MQ0=18;MQRankSum=0.132;QD=13.52;ReadPosRankSum=1.746;VQSLOD=2.6045;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,115,2565	1/1:8,0:7:6:72,6,0	0/0:60,0:31:62.34:0,62,939	0/0:92,0:32:48.31:0,48,876	0/0:28,0:28:69.12:0,69,1458	1/1:18,1:18:28.47:366,28,0	1/1:19,5:24:17.98:264,18,0	0/0:34,0:33:71.85:0,72,1487	0/0:23,0:23:35.25:0,35,547	0/0:26,0:25:61.17:0,61,1115	0/0:16,0:16:30.02:0,30,613	1/1:17,3:17:20.30:287,20,0	0/0:22,0:21:57.18:0,57,1278	1/1:10,1:11:10.62:157,11,0	1/1:15,4:19:16.06:216,16,0	0/0:21,0:20:46.85:0,47,741	0/1:19,1:19:7.84:302,0,8	0/0:21,0:20:41.59:0,42,829	1/1:2,7:9:21.47:266,21,0	0/1:9,3:12:10.13:135,0,10	0/1:15,2:16:2.01:78,0,2	1/1:19,5:24:12.12:126,12,0	0/0:18,0:18:45.10:0,45,981	0/0:48,0:48:99:0,136,3236	1/1:19,2:20:10.31:220,10,0	1/1:20,5:22:55.32:691,55,0	0/1:23,4:25:6.05:346,0,6	1/1:7,1:7:4.27:43,4,0
chr10	65986823	.	CAG	C	1454.06	PASS	AB=0.952;AC=29;AF=0.518;AN=56;BaseQRankSum=10.338;DP=719;FS=3.191;HRun=0;HaplotypeScore=162.2050;InbreedingCoeff=0.8293;MQ=57.50;MQ0=18;MQRankSum=-0.592;QD=5.53;ReadPosRankSum=0.098;VQSLOD=3.1475;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,114,1921	1/1:5,3:7:3.90:44,4,0	0/0:59,0:30:68.76:0,69,770	0/0:96,0:32:39.60:0,40,680	0/0:28,0:28:65.95:0,66,1058	1/1:16,3:18:23.44:164,23,0	1/1:23,1:24:13.74:82,14,0	0/0:32,0:31:66.03:0,66,1059	0/0:23,0:23:34.15:0,34,529	0/0:25,0:24:68.46:0,68,1045	0/0:16,0:16:30:0,30,519	1/1:20,0:17:18.08:127,18,0	0/0:24,0:23:60.16:0,60,951	1/1:10,1:11:8.05:46,8,0	1/1:13,6:19:15.64:109,16,0	0/0:23,0:21:46.92:0,47,707	0/1:19,1:19:1.21:130,0,1	0/0:21,0:20:33.79:0,34,607	1/1:8,0:8:23.84:189,24,0	1/1:11,1:12:5.51:78,6,0	1/1:17,0:16:4.21:38,4,0	1/1:21,3:24:6.14:28,6,0	0/0:17,0:17:44.83:0,45,695	0/0:48,0:48:86.49:0,86,2291	1/1:19,2:20:13.91:111,14,0	1/1:22,3:22:52.91:376,53,0	1/1:26,1:25:2.63:124,3,0	1/1:7,1:7:5.45:19,5,0
chr10	65986832	.	ACT	A	810.70	PASS	AB=1.000;AC=30;AF=0.536;AN=56;BaseQRankSum=11.275;DP=719;FS=2.043;HRun=0;HaplotypeScore=157.8695;InbreedingCoeff=0.4828;MQ=52.95;MQ0=26;MQRankSum=-0.494;QD=2.23;ReadPosRankSum=2.417;VQSLOD=2.5280;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:45:99:0,104,1294	1/1:7,0:6:4.26:46,4,0	0/1:48,0:24:27.34:27,0,433	0/0:86,0:25:39.68:0,40,291	0/0:32,0:31:63.86:0,64,720	1/1:15,2:16:16.18:91,16,0	1/1:25,1:25:9.42:41,9,0	0/0:32,0:30:49.48:0,49,654	0/1:22,0:22:14.56:15,0,117	0/0:26,0:25:19.67:0,20,332	0/0:17,0:17:21.39:0,21,166	1/1:22,0:18:16.85:96,17,0	0/0:26,0:25:50.52:0,51,651	1/1:12,0:11:5.32:18,5,0	1/1:19,0:19:7.05:23,7,0	0/0:24,0:22:29.15:0,29,198	0/1:23,0:22:2.60:91,0,3	0/0:20,0:19:2.62:0,3,159	0/1:14,0:11:41.03:123,0,41	0/1:14,0:13:5.46:5,0,32	1/1:18,0:16:0.66:21,1,0	1/1:24,1:25:6.32:18,6,0	0/1:22,0:20:0.81:1,0,561	0/0:46,0:45:72.07:0,72,1579	1/1:18,1:18:9.37:55,9,0	1/1:22,1:20:35.75:209,36,0	1/1:26,0:23:7.20:103,7,0	1/1:7,0:6:5.55:19,6,0
chr10	65986834	.	TCACACA	T	1472.96	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-1.710;DP=721;FS=1.470;HRun=0;HaplotypeScore=189.6104;InbreedingCoeff=0.6684;MQ=51.90;MQ0=27;MQRankSum=1.198;QD=16.74;ReadPosRankSum=1.198;VQSLOD=2.8884;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:69.85:0,70,1748	0/0:8,0:7:6.26:0,6,104	0/0:43,0:23:14.93:0,15,356	0/0:85,0:24:9.97:0,10,147	0/0:32,0:31:45.03:0,45,1023	0/0:18,0:17:23.78:0,24,438	0/0:26,0:25:11.99:0,12,203	0/0:33,0:30:47.97:0,48,763	1/1:16,6:22:6.11:515,6,0	1/1:25,1:26:1.65:673,2,0	1/1:16,0:16:2.93:62,3,0	0/0:22,0:18:11.75:0,12,171	0/0:28,0:27:56.48:0,56,1356	0/0:12,0:11:9.03:0,9,209	0/0:21,0:21:0.96:0,1,15	1/1:18,2:21:19.86:354,20,0	0/0:22,0:22:21.63:0,22,594	0/0:18,0:17:23.48:0,23,318	0/0:14,0:11:21.02:0,21,267	0/0:16,0:15:9.15:0,9,210	0/0:18,0:16:5.92:0,6,131	0/0:26,0:26:14.94:0,15,295	0/0:22,0:20:18.40:0,18,937	0/0:44,0:45:99:0,105,2666	0/0:19,0:18:21:0,21,388	0/0:24,0:21:18.98:0,19,535	0/0:25,0:22:27.72:0,28,547	0/0:8,0:7:12:0,12,193
chr10	65986876	.	T	TCACACACACA	3233.06	PASS	AB=0.999;AC=22;AF=0.393;AN=56;BaseQRankSum=7.558;DP=627;FS=38.932;HRun=0;HaplotypeScore=203.7764;InbreedingCoeff=-0.3833;MQ=44.86;MQ0=44;MQRankSum=-7.782;QD=8.33;ReadPosRankSum=-4.833;VQSLOD=-0.2926;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:40:71.24:0,71,2532	0/1:6,0:5:66.24:222,0,66	0/0:43,0:8:20.05:0,20,394	0/1:44,0:14:6.94:7,0,399	0/0:26,0:24:41.79:0,42,1339	0/1:17,0:15:99:108,0,109	1/1:19,3:23:1.83:4,2,0	0/1:21,0:15:1.12:1,0,156	0/1:20,0:19:79.41:144,0,79	0/1:25,0:24:99:508,0,331	0/0:13,0:13:0:0,0,0	0/1:20,0:16:32.31:541,0,32	0/0:37,0:36:90.27:0,90,2566	0/1:12,0:12:29.88:136,0,30	1/1:21,2:22:11.81:300,12,0	0/1:21,0:18:47.06:47,0,171	0/1:17,0:15:99:196,0,623	0/1:14,0:13:97.67:98,0,223	0/1:7,0:6:98.35:98,0,468	0/1:21,0:21:38.24:38,0,108	0/0:18,0:13:2.99:0,3,95	0/1:25,0:25:22.87:23,0,127	0/0:24,0:23:60.19:0,60,1849	0/0:36,0:35:99:0,102,3025	0/1:23,0:22:78.05:78,0,216	0/1:17,0:15:99:253,0,597	0/1:20,0:17:99:396,0,308	0/1:10,0:8:99:192,0,142
chr10	65986882	.	T	TCACACACACACACACA	9713.54	PASS	AB=0.875;AC=39;AF=0.696;AN=56;BaseQRankSum=-1.590;DP=686;FS=3.310;HRun=0;HaplotypeScore=249.2279;InbreedingCoeff=0.7606;MQ=49.42;MQ0=43;MQRankSum=-7.056;QD=24.34;ReadPosRankSum=-5.032;VQSLOD=2.6509;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:42:43.03:0,43,2360	1/1:7,1:7:12:503,12,0	0/0:57,0:15:23.57:0,24,685	0/0:52,0:16:12.10:0,12,458	0/0:25,0:23:29.81:0,30,1201	1/1:17,1:16:11.68:395,12,0	1/1:28,0:27:9.03:234,9,0	1/1:21,0:16:26.22:326,26,0	1/1:16,0:17:12.04:385,12,0	1/1:16,0:32:54.43:1759,54,0	0/0:5,0:14:0.47:0,0,1	1/1:19,2:19:24.54:1104,25,0	0/0:35,0:34:57.17:0,57,2328	1/1:15,3:18:11.37:418,11,0	1/1:23,2:25:11.55:583,12,0	1/1:10,0:17:3.01:139,3,0	1/1:19,2:19:15.49:582,15,0	1/1:11,4:15:9.03:666,9,0	1/1:10,1:10:11.99:316,12,0	1/1:22,2:25:1.90:47,2,0	1/1:19,0:16:2.99:24,3,0	0/1:24,3:28:0:0,0,1	0/0:25,0:24:51.63:0,52,2035	0/0:35,0:34:72.22:0,72,2578	1/1:17,2:19:3.01:128,3,0	1/1:15,0:14:19.60:772,20,0	1/1:16,2:16:12.04:715,12,0	1/1:9,1:8:8.99:618,9,0
chr10	65987435	.	G	GGGT	12972.27	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=2.381;DP=480;FS=261.489;HRun=0;HaplotypeScore=92.0772;InbreedingCoeff=0.9750;MQ=74.86;MQ0=1;MQRankSum=-6.071;QD=38.61;ReadPosRankSum=3.636;VQSLOD=0.2559;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:63.17:0,63,976	1/1:0,10:11:21.07:447,21,0	0/0:23,0:20:46.94:0,47,653	0/0:20,0:19:48.08:0,48,665	0/0:17,0:17:45.12:0,45,681	1/1:1,17:19:32.95:703,33,0	1/1:4,34:40:69.20:1418,69,0	1/1:7,13:21:36.02:606,36,0	1/1:4,14:19:33.10:650,33,0	1/1:4,12:17:42.08:759,42,0	1/1:1,6:7:12.94:314,13,0	1/1:2,15:17:48.16:1001,48,0	0/0:19,0:19:48.13:0,48,730	1/1:3,12:16:36.12:763,36,0	1/1:1,12:16:24.06:486,24,0	1/1:2,5:8:12.03:255,12,0	1/1:4,10:14:27.08:576,27,0	1/1:2,5:7:8.96:146,9,0	1/1:3,9:13:22.79:499,23,0	1/1:3,9:12:27.01:489,27,0	1/1:1,27:32:45:956,45,0	1/1:1,14:16:30.10:605,30,0	0/0:16,0:16:38.94:0,39,622	0/0:23,0:23:60.17:0,60,929	1/1:0,19:20:42.14:874,42,0	1/1:2,9:11:23.69:467,24,0	1/1:2,12:14:27.09:574,27,0	1/1:0,6:6:18.06:383,18,0
chr10	65987437	.	G	GT	1711.06	PASS	AB=0.971;AC=37;AF=0.661;AN=56;BaseQRankSum=13.076;DP=453;FS=197.258;HRun=0;HaplotypeScore=107.3463;InbreedingCoeff=0.5347;MQ=75.13;MQ0=1;MQRankSum=-7.320;QD=5.52;ReadPosRankSum=6.002;VQSLOD=0.3451;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:72.11:0,72,911	1/1:10,0:10:18.55:81,19,0	0/0:21,0:18:54.09:0,54,628	0/0:20,0:19:50.66:0,51,552	0/0:18,0:18:45.06:0,45,571	1/1:16,0:16:28.56:111,29,0	1/1:39,1:41:39.32:242,39,0	0/1:17,0:17:28.95:44,0,29	1/1:18,0:18:7.99:60,8,0	1/1:14,0:14:13.90:118,14,0	1/1:7,0:7:10.85:47,11,0	1/1:16,1:17:41.13:159,41,0	0/0:19,0:19:48.11:0,48,606	1/1:12,1:13:31.14:121,31,0	0/1:15,0:15:15.39:46,0,15	0/1:8,0:8:24.19:24,0,30	1/1:12,0:12:3.46:67,3,0	0/1:5,1:6:12.68:27,0,13	1/1:12,0:12:3.17:149,3,0	1/1:13,0:13:22.42:93,22,0	1/1:30,1:31:17.58:143,18,0	1/1:14,0:14:9.18:68,9,0	0/0:16,0:16:40.52:0,41,544	0/0:22,0:22:66.16:0,66,838	1/1:18,0:18:33.26:121,33,0	1/1:8,0:8:18.26:71,18,0	0/1:14,0:14:20.56:60,0,21	1/1:6,0:6:15.58:60,16,0
chr10	65987791	.	GTGGCAA	G	3515.27	PASS	AB=0.941;AC=7;AF=0.125;AN=56;BaseQRankSum=10.879;DP=735;FS=4.027;HRun=0;HaplotypeScore=153.2003;InbreedingCoeff=0.8364;MQ=87.64;MQ0=0;MQRankSum=-10.802;QD=32.55;ReadPosRankSum=1.112;VQSLOD=3.4762;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,144,4638	0/0:12,0:12:33.11:0,33,1079	0/0:21,0:21:48.15:0,48,1452	0/0:32,0:32:81.20:0,81,2445	0/0:23,0:23:54.16:0,54,1691	0/0:18,0:18:48.15:0,48,1515	0/0:30,0:30:78.27:0,78,2623	0/0:28,0:28:69.23:0,69,2183	0/0:28,0:28:75.26:0,75,2518	1/1:5,13:18:39.08:785,39,0	1/1:4,21:25:48.16:1077,48,0	0/0:36,0:36:96.33:0,96,3191	0/0:22,0:22:57.18:0,57,1824	0/0:25,0:25:72.25:0,72,2410	0/0:27,0:27:78.27:0,78,2677	1/1:6,27:33:72.25:1600,72,0	0/0:44,0:44:99:0,123,3982	0/0:27,0:27:69.24:0,69,2255	0/0:21,0:21:54.15:0,54,1584	0/0:14,0:14:39.13:0,39,1313	0/0:46,0:46:99:0,129,4365	0/0:15,0:15:39.13:0,39,1184	0/0:13,0:13:30.10:0,30,883	0/0:27,0:27:81.28:0,81,2637	0/0:28,0:28:69.24:0,69,2269	0/1:30,2:32:53.25:53,0,2446	0/0:26,0:26:72.24:0,72,2359	0/0:13,0:13:39.13:0,39,1344
chr10	65989303	.	AC	A	2472.34	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=9.751;DP=606;FS=6.411;HRun=6;HaplotypeScore=62.3333;InbreedingCoeff=0.9555;MQ=86.89;MQ0=0;MQRankSum=-1.773;QD=26.58;ReadPosRankSum=-0.780;VQSLOD=3.7410;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:81.23:0,81,1035	0/0:12,0:12:36.11:0,36,460	0/0:20,0:20:48.16:0,48,631	0/0:22,0:22:59.75:0,60,724	0/0:17,0:17:36.12:0,36,474	0/0:21,0:21:63.20:0,63,815	0/0:25,0:25:63.19:0,63,812	1/1:2,22:24:66.14:700,66,0	0/0:8,0:8:8.92:0,9,63	1/1:4,22:26:69.17:740,69,0	1/1:1,18:19:51.13:547,51,0	0/0:29,0:29:81.25:0,81,1041	0/0:18,0:18:51.16:0,51,655	0/0:23,0:23:69.22:0,69,906	0/0:19,0:19:57.18:0,57,737	1/1:2,22:24:60.15:645,60,0	0/0:26,0:26:75.24:0,75,987	0/0:23,0:23:66.21:0,66,868	0/0:23,0:23:60.14:0,60,731	0/0:11,0:11:30.08:0,30,374	0/0:40,0:40:99:0,117,1479	0/0:20,0:20:51.17:0,51,668	0/0:17,0:17:51.17:0,51,669	0/0:24,0:24:66.21:0,66,868	0/0:17,0:17:45.15:0,45,591	0/0:25,0:25:66.21:0,66,867	0/0:36,0:36:99:0,102,1339	0/0:4,0:4:6.02:0,6,79
chr10	65990325	.	TCAGTGGACTC	T	943.88	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.946;DP=465;FS=0.000;HRun=0;HaplotypeScore=151.9810;InbreedingCoeff=0.9880;MQ=91.29;MQ0=0;MQRankSum=-5.626;QD=78.66;ReadPosRankSum=1.963;VQSLOD=3.2440;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,129,6710	0/0:8,0:8:24.08:0,24,1153	0/0:28,0:28:72.25:0,72,3096	0/0:26,0:26:69.57:0,70,2459	0/0:11,0:11:33.11:0,33,1670	0/0:19,0:19:57.20:0,57,3024	0/0:17,0:17:51.16:0,51,2329	0/0:19,0:19:57.20:0,57,2785	0/0:9,0:9:27.09:0,27,1441	0/0:14,0:14:33.11:0,33,1579	0/0:8,0:8:24.08:0,24,1256	0/0:17,0:17:51.17:0,51,2590	0/0:13,0:13:39.12:0,39,1761	0/0:15,0:15:45.14:0,45,2202	0/0:18,0:18:54.19:0,54,2816	0/0:12,0:12:36.12:0,36,1742	0/0:18,0:18:54.19:0,54,2784	1/1:0,12:12:33.11:1039,33,0	0/0:24,0:24:66.23:0,66,3086	0/0:8,0:8:24.07:0,24,1043	0/0:36,0:36:99:0,105,5510	0/0:8,0:8:24.08:0,24,1280	0/0:11,0:11:30.10:0,30,1504	0/0:26,0:26:75.26:0,75,3864	0/0:9,0:9:27.09:0,27,1340	0/0:14,0:14:39.13:0,39,1830	0/0:11,0:11:33.11:0,33,1759	0/0:11,0:11:33.11:0,33,1667
chr10	65990911	.	TC	T	1181.61	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.779;DP=711;FS=2.613;HRun=3;HaplotypeScore=81.0496;InbreedingCoeff=0.9952;MQ=77.89;MQ0=6;MQRankSum=2.623;QD=28.13;ReadPosRankSum=-4.598;VQSLOD=1.5106;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:79.51:0,80,1056	0/0:7,0:7:21.07:0,21,300	0/0:64,0:40:59.46:0,59,861	0/0:43,1:30:52.53:0,53,557	0/0:20,0:20:57.16:0,57,765	0/0:17,0:16:48.12:0,48,633	0/0:26,0:26:72.69:0,73,999	1/1:2,40:42:99:1276,120,0	0/0:22,0:22:63.13:0,63,807	0/0:31,0:31:92.28:0,92,1170	0/0:13,0:13:34.51:0,35,463	0/0:20,0:20:60.09:0,60,798	0/0:21,0:21:60.16:0,60,806	0/0:19,0:19:42.03:0,42,609	0/0:25,0:25:75.22:0,75,1038	0/0:11,0:11:30.09:0,30,415	0/0:32,0:32:93.24:0,93,1256	0/0:21,0:21:57.16:0,57,797	0/0:18,0:18:48.15:0,48,673	0/0:28,0:28:84.26:0,84,1171	0/0:23,0:23:62.17:0,62,828	0/0:20,0:20:60.17:0,60,804	0/0:25,0:25:75.22:0,75,1017	0/0:29,0:29:87.23:0,87,1176	0/0:25,0:25:75.17:0,75,953	0/0:23,0:23:51.49:0,51,851	0/0:36,0:36:99:0,108,1412	0/0:18,0:18:54.13:0,54,714
chr10	65991582	.	G	GA	426.56	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-4.971;DP=666;FS=6.220;HRun=9;HaplotypeScore=66.0383;InbreedingCoeff=0.9262;MQ=77.11;MQ0=0;MQRankSum=-0.208;QD=20.31;ReadPosRankSum=0.927;VQSLOD=4.3055;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,153,1323	0/0:6,0:6:14.97:0,15,125	0/0:21,0:21:11.08:0,11,255	0/0:14,0:14:14.67:0,15,124	0/0:30,0:30:71.81:0,72,621	0/0:22,0:22:56.97:0,57,491	0/0:26,0:26:62.95:0,63,543	0/0:35,0:35:83.90:0,84,718	0/0:18,0:18:47.99:0,48,417	0/0:27,0:27:74.97:0,75,649	0/0:27,0:27:65.95:0,66,566	0/0:24,0:24:65.99:0,66,573	0/0:20,0:20:53.99:0,54,469	0/0:21,0:21:50.98:0,51,443	0/0:29,0:29:65.97:0,66,573	0/0:20,0:20:56.98:0,57,495	0/0:30,0:30:83.97:0,84,729	1/1:5,16:21:48.11:521,48,0	0/0:27,0:27:71.96:0,72,621	0/0:21,0:21:53.99:0,54,469	0/0:22,0:22:59.99:0,60,521	0/0:22,0:22:56.96:0,57,489	0/0:30,0:30:74.96:0,75,651	0/0:24,0:24:59.99:0,60,521	0/0:14,0:14:29.99:0,30,260	0/0:29,0:29:65.97:0,66,573	0/0:25,0:25:68.97:0,69,599	0/0:7,0:7:17.99:0,18,156
chr10	65992060	.	G	GAT	1929.07	PASS	AB=0.567;AC=7;AF=0.125;AN=56;BaseQRankSum=-4.399;DP=606;FS=5.585;HRun=0;HaplotypeScore=79.9652;InbreedingCoeff=0.7790;MQ=73.57;MQ0=1;MQRankSum=-0.711;QD=25.38;ReadPosRankSum=-2.630;VQSLOD=3.7652;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:16:23.89:0,24,259	0/0:7,0:7:18.06:0,18,223	0/0:15,0:16:3.12:0,3,70	0/0:10,0:10:5.75:0,6,49	0/0:24,0:28:68.52:0,69,736	0/0:25,0:26:66.04:0,66,794	0/0:29,0:29:65.78:0,66,777	1/1:12,0:12:6.01:63,6,0	0/0:22,0:22:51.15:0,51,620	1/1:7,16:23:48.15:761,48,0	1/1:6,18:24:48.16:787,48,0	0/0:28,0:30:71.88:0,72,830	0/0:19,0:19:51.13:0,51,606	0/0:21,0:21:54.17:0,54,669	0/0:10,0:10:24.06:0,24,284	0/1:4,12:17:3.60:459,0,4	0/0:33,0:33:84.13:0,84,994	0/0:21,0:21:57.12:0,57,664	0/0:16,0:18:40.99:0,41,465	0/0:33,0:35:83.93:0,84,995	0/0:28,0:28:72.18:0,72,853	0/0:25,0:25:57.18:0,57,704	0/0:17,0:19:47.95:0,48,545	0/0:27,0:27:60.16:0,60,717	0/0:17,0:17:39.12:0,39,483	0/0:24,1:26:22.81:0,23,771	0/0:25,0:25:54.14:0,54,643	0/0:19,0:21:47.80:0,48,536
chr10	65994246	.	GGGCTCTGTTCTGA	G	23405.32	PASS	AB=0.544;AC=28;AF=0.500;AN=56;BaseQRankSum=17.308;DP=584;FS=5.559;HRun=0;HaplotypeScore=238.8951;InbreedingCoeff=0.8162;MQ=72.63;MQ0=0;MQRankSum=-18.073;QD=88.66;ReadPosRankSum=4.324;VQSLOD=4.3516;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,150,9628	1/1:0,5:5:15.05:599,15,0	0/0:17,0:17:42.12:0,42,1837	0/0:17,0:18:51.16:0,51,2735	0/0:30,0:30:87.26:0,87,5070	1/1:3,12:15:30.10:1126,30,0	1/1:6,10:16:30.10:1206,30,0	0/0:25,0:25:63.06:0,63,3149	0/0:22,0:22:63.22:0,63,4190	0/0:29,0:29:84.29:0,84,5183	0/0:22,0:22:66.23:0,66,3979	1/1:2,22:24:63.22:2534,63,0	0/0:17,0:17:51.17:0,51,3172	1/1:0,22:22:57.20:2293,57,0	0/1:4,26:30:99:2857,0,122	0/0:30,0:30:87.30:0,87,5564	1/1:8,11:19:24.07:934,24,0	0/0:18,0:18:54.19:0,54,3593	1/1:5,10:15:30.06:956,30,0	1/1:2,17:19:51.18:2047,51,0	1/1:6,1:7:6:145,6,0	1/1:1,22:23:57.14:2174,57,0	0/0:22,0:22:66.23:0,66,4088	0/0:20,0:20:60.20:0,60,3578	1/1:0,13:13:33.11:1328,33,0	0/1:4,17:21:99:1829,0,343	1/1:2,29:31:81.28:3257,81,0	1/1:0,4:4:3.01:121,3,0
chr10	65994800	.	C	CAG	619.48	PASS	AB=0.937;AC=25;AF=0.500;AN=50;BaseQRankSum=1.889;DP=531;FS=0.000;HRun=0;HaplotypeScore=113.1174;InbreedingCoeff=0.3389;MQ=64.00;MQ0=15;MQRankSum=0.026;QD=2.30;ReadPosRankSum=1.001;VQSLOD=1.8938;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:35,3:35:23.78:123,0,24	1/1:3,0:3:2.96:19,3,0	./.	./.	0/0:26,0:27:26.30:0,26,221	1/1:21,0:21:1.82:7,2,0	./.	1/1:30,0:30:2.96:7,3,0	0/0:15,0:15:2.74:0,3,12	0/0:28,0:26:1.96:0,2,187	0/0:21,0:21:5.91:0,6,66	0/0:16,0:16:3.01:0,3,12	0/0:24,0:25:29.78:0,30,282	0/1:12,0:12:7.63:15,0,8	1/1:15,0:15:3:28,3,0	0/1:19,9:28:32.02:275,0,32	1/1:21,0:21:5.91:46,6,0	0/0:10,0:10:7.42:0,7,33	1/1:18,0:17:9.08:61,9,0	0/1:13,0:13:0:0,0,0	0/0:17,0:17:0.36:0,0,2	0/1:14,0:11:2.24:10,0,2	0/0:16,0:17:13.72:0,14,100	0/0:32,0:33:54.07:0,54,571	1/1:11,0:11:6.01:69,6,0	1/1:22,0:21:9.58:76,10,0	1/1:11,0:11:1:23,1,0	1/1:12,0:8:2.15:8,2,0
chr10	65994830	.	GAGAGAC	G	1439.16	PASS	AB=0.949;AC=38;AF=0.731;AN=52;BaseQRankSum=2.670;DP=519;FS=38.705;HRun=0;HaplotypeScore=145.3240;InbreedingCoeff=0.4544;MQ=40.20;MQ0=49;MQRankSum=-3.013;QD=3.65;ReadPosRankSum=-2.370;VQSLOD=0.1048;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:34:37.04:0,37,373	1/1:3,0:3:2.98:21,3,0	./.	./.	0/0:30,0:27:38.62:0,39,674	1/1:25,0:22:8.11:65,8,0	0/1:13,0:7:0.31:0,0,1	1/1:39,0:37:60.29:390,60,0	1/1:11,1:10:8.03:42,8,0	0/1:36,0:33:1.74:2,0,399	1/1:16,0:15:2.74:21,3,0	1/1:20,0:18:12.87:74,13,0	0/0:23,0:21:11.07:0,11,591	1/1:21,0:13:11.77:86,12,0	1/1:11,0:9:2.99:24,3,0	0/1:32,0:30:14.15:14,0,81	1/1:17,0:16:19.11:128,19,0	0/1:10,8:16:19.06:55,0,19	1/1:19,0:17:15.37:125,15,0	0/1:7,0:7:0:0,0,0	1/1:14,0:11:3.56:39,4,0	1/1:15,0:8:6.34:37,6,0	0/1:15,0:15:2.32:2,0,223	0/0:32,0:29:47.01:0,47,1308	1/1:16,0:14:5.92:42,6,0	1/1:25,0:20:18.18:259,18,0	1/1:12,0:12:17.25:121,17,0	1/1:8,0:4:7.72:53,8,0
chr10	65994834	.	GAC	G	2240.55	PASS	AB=0.986;AC=33;AF=0.635;AN=52;BaseQRankSum=2.332;DP=508;FS=62.597;HRun=0;HaplotypeScore=118.3680;InbreedingCoeff=0.4988;MQ=39.71;MQ0=50;MQRankSum=-3.691;QD=6.81;ReadPosRankSum=-2.235;VQSLOD=0.3603;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:32:38.45:0,38,282	1/1:2,1:3:2.97:20,3,0	./.	./.	0/0:30,0:27:5.83:0,6,453	1/1:23,0:20:19.01:148,19,0	0/1:12,1:7:0.29:0,0,1	1/1:40,0:37:74.51:494,75,0	0/1:12,0:10:4.93:26,0,5	0/0:33,0:30:53.39:0,53,512	0/0:16,0:15:5.97:0,6,66	1/1:20,1:19:20.89:168,21,0	0/0:23,0:21:12.32:0,12,429	1/1:19,0:11:17.48:119,17,0	1/1:11,0:9:3.01:32,3,0	0/1:32,0:30:90.45:141,0,90	1/1:17,0:16:23.76:170,24,0	0/1:17,0:15:10.68:29,0,11	1/1:15,1:14:24.85:208,25,0	0/0:6,0:6:0.47:0,0,1	1/1:13,0:10:9.43:69,9,0	1/1:13,1:7:9:101,9,0	0/1:17,0:17:36.73:37,0,122	0/0:33,0:30:65.65:0,66,1017	1/1:16,0:14:7.55:55,8,0	1/1:25,0:20:27.67:338,28,0	1/1:11,1:12:26.89:186,27,0	1/1:8,0:4:11.78:72,12,0
chr10	65994840	.	GAC	G	1584.54	PASS	AB=0.989;AC=32;AF=0.615;AN=52;BaseQRankSum=4.774;DP=504;FS=71.889;HRun=0;HaplotypeScore=123.8378;InbreedingCoeff=0.4520;MQ=39.57;MQ0=49;MQRankSum=0.498;QD=5.50;ReadPosRankSum=-0.780;VQSLOD=-0.1916;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:29:38.08:0,38,589	1/1:1,1:2:2.97:20,3,0	./.	./.	0/0:30,0:27:57.06:0,57,853	1/1:22,0:19:19.01:148,19,0	0/1:13,1:8:0.26:0,0,1	0/0:41,0:38:4.60:0,5,510	0/1:12,0:10:17.88:18,0,25	0/0:37,0:34:53.71:0,54,984	1/1:16,0:15:2.98:21,3,0	1/1:20,0:18:17.46:149,17,0	0/0:23,0:21:34.36:0,34,534	1/1:18,1:12:14.88:109,15,0	1/1:11,0:9:3.01:32,3,0	0/1:32,0:30:99:131,0,178	1/1:19,0:18:16.87:188,17,0	0/1:17,0:15:26.73:27,0,31	1/1:10,1:9:17.96:152,18,0	0/1:6,0:6:0:0,0,0	1/1:11,0:8:9.44:70,9,0	1/1:16,1:10:12.01:130,12,0	0/0:16,0:16:1.36:0,1,216	0/0:34,0:31:61.85:0,62,1099	1/1:16,0:14:5.91:32,6,0	0/1:22,0:17:15.07:260,0,15	1/1:11,2:13:25.85:200,26,0	1/1:8,0:4:11.78:72,12,0
chr10	65994842	.	CAGAG	C	773.18	PASS	AB=0.905;AC=5;AF=0.100;AN=50;BaseQRankSum=3.975;DP=505;FS=3.566;HRun=0;HaplotypeScore=142.1713;InbreedingCoeff=0.0802;MQ=39.48;MQ0=49;MQRankSum=-2.361;QD=6.97;ReadPosRankSum=2.936;VQSLOD=2.6690;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:29:39.56:0,40,703	./.	./.	./.	0/0:30,0:27:51.13:0,51,956	0/0:22,0:19:9.10:0,9,77	0/1:14,0:8:0.27:0,0,0	0/0:44,0:41:99:0,114,1010	0/0:11,0:9:8.99:0,9,77	0/1:27,9:33:99:495,0,746	0/0:14,3:16:0.45:0,0,1	0/0:19,0:17:7.10:0,7,40	0/0:24,0:22:40.17:0,40,623	0/0:19,0:12:2.78:0,3,7	0/1:12,0:10:0.14:0,0,0	0/1:20,12:30:99:348,0,144	0/0:19,0:18:15.19:0,15,81	0/1:17,0:15:24.81:25,0,46	0/0:11,0:9:3.27:0,3,28	0/0:6,0:6:5.87:0,6,40	0/0:10,0:8:4.52:0,5,30	0/0:17,0:10:6.67:0,7,55	0/0:15,0:15:27.06:0,27,425	0/0:33,0:30:66.09:0,66,1358	0/0:16,0:14:8.94:0,9,68	0/0:22,0:17:12.63:0,13,100	0/0:13,0:13:1.51:0,2,25	0/0:8,0:4:1.67:0,2,19
chr10	65994874	.	GAC	G	370.52	PASS	AB=0.957;AC=15;AF=0.300;AN=50;BaseQRankSum=5.691;DP=565;FS=10.059;HRun=0;HaplotypeScore=126.7331;InbreedingCoeff=-0.0011;MQ=43.29;MQ0=47;MQRankSum=-2.738;QD=1.35;ReadPosRankSum=-3.625;VQSLOD=0.4596;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:26:25.60:0,26,609	./.	./.	./.	0/0:22,0:21:47.01:0,47,668	0/1:22,0:19:22.65:23,0,203	0/0:16,0:10:13.22:0,13,137	0/0:35,0:33:78.30:0,78,621	0/1:4,11:13:24.96:59,0,25	0/1:28,0:25:13.34:13,0,203	1/1:18,0:17:8.72:47,9,0	0/1:24,0:21:4.46:4,0,191	0/0:26,0:24:29.58:0,30,314	0/0:26,0:19:23.95:0,24,325	0/0:18,0:15:18:0,18,265	0/1:32,0:30:2.09:2,0,21	0/1:26,0:25:54.91:55,0,284	1/1:15,3:16:29.77:258,30,0	0/1:19,1:18:5.27:5,0,401	0/0:17,0:16:3.84:0,4,158	0/1:22,0:19:6.40:6,0,272	0/1:22,0:17:6.23:6,0,165	0/0:19,0:19:21.02:0,21,244	0/0:26,0:23:25.51:0,26,376	0/0:21,0:20:23.87:0,24,307	0/0:29,0:24:16.25:0,16,465	0/1:19,0:18:19.81:20,0,235	0/1:8,0:5:10.60:21,0,11
chr10	65994876	.	C	CAG	3014.13	PASS	AB=0.936;AC=30;AF=0.577;AN=52;BaseQRankSum=-0.529;DP=572;FS=7.373;HRun=0;HaplotypeScore=125.8250;InbreedingCoeff=-0.1068;MQ=43.67;MQ0=46;MQRankSum=0.824;QD=6.40;ReadPosRankSum=-2.570;VQSLOD=1.8689;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:26:22.50:0,23,358	1/1:3,0:2:2.97:20,3,0	./.	./.	0/0:20,0:19:36.09:0,36,395	1/1:22,0:19:16.18:172,16,0	1/1:16,0:10:12.03:139,12,0	0/1:39,0:37:8.31:8,0,49	0/0:15,0:13:5.42:0,5,23	0/1:29,0:26:31.33:31,0,47	0/1:19,0:18:9.07:30,0,9	0/1:24,0:21:18.59:119,0,19	0/1:18,8:25:74.17:74,0,90	0/1:24,1:18:9.59:222,0,10	1/1:18,0:15:18.05:200,18,0	0/0:33,0:31:17.84:0,18,98	0/1:27,0:26:40.81:195,0,41	0/1:20,0:18:11.64:12,0,15	1/1:19,0:17:30.08:344,30,0	0/1:18,0:17:13.57:164,0,14	0/1:21,0:18:61.54:172,0,62	0/1:22,0:17:21.63:89,0,22	0/1:7,12:19:3.59:253,0,4	0/1:18,2:22:49.50:126,0,50	0/1:22,0:21:9.57:214,0,10	1/1:28,0:24:12.94:250,13,0	1/1:18,0:17:24.06:307,24,0	1/1:9,0:6:5.92:39,6,0
chr10	65994898	.	G	GAT	4811.84	PASS	AB=0.852;AC=30;AF=0.536;AN=56;BaseQRankSum=-6.663;DP=565;FS=7.641;HRun=0;HaplotypeScore=100.7037;InbreedingCoeff=0.3486;MQ=55.64;MQ0=29;MQRankSum=4.052;QD=12.83;ReadPosRankSum=7.084;VQSLOD=3.3709;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:27:50.02:0,50,620	1/1:4,1:4:3.01:38,3,0	0/1:21,0:11:9.69:10,0,193	0/0:12,0:4:10.57:0,11,95	0/0:16,0:16:42.10:0,42,593	1/1:4,19:21:16.19:291,16,0	1/1:2,11:12:12.04:229,12,0	0/0:29,0:28:79.73:0,80,634	0/0:18,0:16:11.17:0,11,129	0/0:24,0:23:59.73:0,60,472	0/0:18,0:18:17.92:0,18,145	0/1:8,16:24:19.37:210,0,19	0/1:20,0:18:19.31:19,0,164	1/1:6,17:20:13.09:348,13,0	1/1:3,14:16:17.69:345,18,0	0/0:26,0:25:27.19:0,27,213	0/1:12,14:27:58.63:326,0,59	0/0:17,0:16:36.74:0,37,278	1/1:6,8:13:33.07:589,33,0	1/1:6,16:21:10.18:295,10,0	0/1:8,16:23:14.77:306,0,15	1/1:5,13:17:1.13:162,1,0	0/1:23,0:23:86.65:87,0,145	0/1:20,0:17:23.15:23,0,133	1/1:3,17:21:13.19:392,13,0	1/1:4,17:20:11.47:544,11,0	1/1:3,14:16:27.01:463,27,0	0/1:13,0:10:16.43:136,0,16
chr10	65994904	.	GAGAGAT	G	1849.54	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=0.185;DP=529;FS=1.251;HRun=0;HaplotypeScore=128.5299;InbreedingCoeff=0.8275;MQ=63.56;MQ0=19;MQRankSum=-2.257;QD=20.78;ReadPosRankSum=-0.986;VQSLOD=2.8827;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:27:45.60:0,46,1275	0/0:5,0:4:4.62:0,5,35	0/0:26,0:16:37.30:0,37,415	0/0:14,0:6:12.49:0,12,160	0/0:16,0:16:48.10:0,48,1295	0/0:24,0:22:26.77:0,27,461	0/0:13,0:12:12.04:0,12,257	0/0:25,0:25:73.94:0,74,823	0/1:17,0:16:8.83:111,0,9	1/1:15,5:20:43.08:714,43,0	1/1:11,2:13:29.25:373,29,0	0/0:23,0:22:24.01:0,24,461	0/0:17,0:15:20.79:0,21,509	0/0:18,0:17:24.08:0,24,610	0/0:17,0:16:21.05:0,21,448	1/1:2,19:22:27.09:653,27,0	0/0:24,0:23:39.13:0,39,627	1/1:17,0:16:12.47:160,12,0	0/0:17,0:17:48.11:0,48,807	0/0:24,0:23:30.04:0,30,494	0/0:24,0:22:30.01:0,30,677	0/0:19,0:18:20.62:0,21,384	0/0:24,0:24:44.42:0,44,721	0/0:16,0:14:23.90:0,24,607	0/0:18,0:18:24.08:0,24,611	0/0:19,0:18:51.14:0,51,944	0/0:14,0:13:25.70:0,26,546	0/0:14,0:11:28.75:0,29,226
chr10	65995147	.	T	TC	5153.04	PASS	AB=0.595;AC=39;AF=0.696;AN=56;BaseQRankSum=-6.595;DP=510;FS=2.368;HRun=9;HaplotypeScore=71.3301;InbreedingCoeff=0.6747;MQ=88.21;MQ0=0;MQRankSum=-4.300;QD=13.96;ReadPosRankSum=1.036;VQSLOD=4.9843;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:24:53:0,53,444	1/1:4,1:5:2.99:24,3,0	0/0:21,0:21:34.94:0,35,342	0/0:22,0:22:47.69:0,48,347	0/0:21,0:21:47.97:0,48,412	0/1:5,9:14:25.03:204,0,25	1/1:5,17:22:45.59:499,46,0	1/1:8,13:21:30.01:291,30,0	1/1:14,0:14:17.42:78,17,0	1/1:11,0:19:17.32:100,17,0	1/1:8,0:16:0.47:1,0,0	1/1:3,19:22:38.79:431,39,0	0/0:17,0:17:44.99:0,45,390	0/1:6,19:25:6.66:386,0,7	1/1:2,16:18:36.09:394,36,0	1/1:1,1:10:5.68:28,6,0	1/1:2,12:15:10.03:332,10,0	1/1:6,1:20:23.47:137,23,0	1/1:12,10:22:32.75:323,33,0	1/1:6,9:15:12.42:106,12,0	1/1:4,26:30:69.12:748,69,0	1/1:5,8:13:12.03:133,12,0	0/0:21,0:21:44.97:0,45,390	0/0:15,0:15:41.99:0,42,365	0/1:6,11:17:1.99:208,0,2	1/1:5,4:9:15.04:166,15,0	1/1:5,16:19:3.85:271,4,0	1/1:10,11:21:6.99:292,7,0
chr10	65996251	.	C	CG	8508.31	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=-8.558;DP=427;FS=4.244;HRun=6;HaplotypeScore=47.6375;InbreedingCoeff=0.9817;MQ=82.85;MQ0=1;MQRankSum=-3.055;QD=28.46;ReadPosRankSum=0.168;VQSLOD=5.2270;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:20:34.40:0,34,554	1/1:0,5:5:15.05:189,15,0	0/0:16,0:14:22.98:0,23,257	0/0:21,0:21:19.90:0,20,342	0/0:21,0:21:57.13:0,57,581	1/1:2,16:18:42.13:521,42,0	1/1:6,20:26:47.86:603,48,0	1/1:4,16:20:45.12:535,45,0	1/1:2,11:13:30.10:377,30,0	1/1:2,13:15:33.10:405,33,0	1/1:0,7:7:15.05:187,15,0	1/1:1,14:15:39.12:491,39,0	0/0:11,0:11:30.07:0,30,306	1/1:2,15:17:30.10:377,30,0	1/1:1,9:10:24.08:302,24,0	1/1:1,6:7:18.06:226,18,0	1/1:3,13:16:27.08:340,27,0	1/1:1,12:13:33.11:415,33,0	1/1:8,10:17:11.49:422,11,0	1/1:2,12:14:27.09:339,27,0	1/1:6,23:29:66.21:825,66,0	1/1:2,5:7:18.06:226,18,0	0/0:18,0:18:51.11:0,51,519	0/0:20,0:20:48.10:0,48,490	1/1:0,16:16:45.14:566,45,0	1/1:0,14:14:42.06:483,42,0	1/1:1,11:12:33.11:415,33,0	1/1:0,7:7:21.07:264,21,0
chr10	65996562	.	A	AACAC	1536.32	PASS	AB=0.872;AC=31;AF=0.646;AN=48;BaseQRankSum=-2.147;DP=402;FS=4.576;HRun=0;HaplotypeScore=81.6994;InbreedingCoeff=0.3294;MQ=63.85;MQ0=7;MQRankSum=-0.071;QD=6.07;ReadPosRankSum=-2.745;VQSLOD=1.3351;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:23:1.33:10,1,0	1/1:5,0:5:6:61,6,0	./.	./.	0/1:6,0:8:18.82:19,0,26	1/1:5,4:14:15:265,15,0	1/1:15,2:22:14.11:174,14,0	./.	0/1:12,0:18:3.11:3,0,146	0/0:14,0:14:12.02:0,12,163	0/0:7,0:6:3.01:0,3,45	0/1:7,1:9:39.91:64,0,40	0/1:7,0:9:2.16:2,0,23	1/1:9,2:13:3.48:55,3,0	1/1:8,0:12:2.74:12,3,0	0/0:11,0:11:15.45:0,15,203	1/1:13,5:21:15.67:293,16,0	0/0:12,0:14:9.01:0,9,84	1/1:11,1:13:6.02:108,6,0	1/1:4,0:5:2.74:12,3,0	1/1:28,0:28:8.50:80,9,0	1/1:7,0:6:3.01:64,3,0	0/0:4,0:4:3.01:0,3,42	0/0:24,0:26:33.10:0,33,455	1/1:5,2:9:2.96:70,3,0	1/1:10,3:14:12.56:208,13,0	0/1:13,4:19:12.06:192,0,12	./.
chr10	65996734	.	G	GGA	1130.88	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-6.626;DP=494;FS=2.609;HRun=0;HaplotypeScore=58.3253;InbreedingCoeff=0.9226;MQ=66.21;MQ0=5;MQRankSum=2.010;QD=36.48;ReadPosRankSum=-4.250;VQSLOD=4.2781;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:66.22:0,66,940	0/0:3,0:3:9.02:0,9,111	0/0:36,0:14:16.14:0,16,291	0/0:35,0:13:21.68:0,22,286	0/0:19,0:19:51.17:0,51,719	0/0:20,0:20:54.16:0,54,739	0/0:14,0:14:36.10:0,36,478	1/1:3,26:28:78.19:1226,78,0	0/0:19,0:19:51.17:0,51,727	0/0:21,0:21:60.15:0,60,776	0/0:15,0:15:39.08:0,39,518	0/0:17,0:17:42.13:0,42,583	0/0:16,0:16:42.14:0,42,600	0/0:13,0:13:39.12:0,39,538	0/0:12,0:12:36.12:0,36,516	0/0:13,0:13:39.13:0,39,558	0/0:11,0:11:33.09:0,33,452	0/0:15,0:15:35.11:0,35,448	0/0:20,0:19:54.18:0,54,758	0/0:15,0:15:45.15:0,45,644	0/0:26,0:26:69.15:0,69,880	0/0:12,0:12:33.10:0,33,450	0/0:16,0:16:45.14:0,45,625	0/0:16,0:16:45.15:0,45,644	0/0:10,0:10:30.08:0,30,411	0/0:14,0:13:39.12:0,39,542	0/0:23,0:23:66.18:0,66,919	0/0:6,0:6:18.06:0,18,258
chr10	66000884	.	GC	G	1095.23	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.243;DP=531;FS=21.520;HRun=1;HaplotypeScore=51.4302;InbreedingCoeff=0.9162;MQ=79.52;MQ0=0;MQRankSum=-1.558;QD=36.51;ReadPosRankSum=1.760;VQSLOD=1.7998;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:84.27:0,84,1303	0/0:1,0:1:3.01:0,3,48	0/0:17,0:17:48.14:0,48,724	0/0:19,0:19:37.66:0,38,698	0/0:21,0:21:60.19:0,60,935	0/0:19,0:19:54.18:0,54,843	0/0:26,0:25:75.26:0,75,1193	0/0:39,0:39:99:0,117,1806	1/1:0,12:12:36.12:503,36,0	0/0:15,0:15:42.14:0,42,650	0/0:18,0:18:54.09:0,54,782	0/0:23,0:23:66.16:0,66,998	0/0:15,0:15:45.15:0,45,719	0/0:11,0:11:33.10:0,33,502	0/0:20,0:20:60.14:0,60,902	0/0:13,0:12:36.12:0,36,575	0/0:28,0:28:81.28:0,81,1292	1/1:0,18:18:51.17:713,51,0	0/0:24,0:24:72.18:0,72,1076	0/0:23,0:23:69.22:0,69,1078	0/0:13,0:13:39.10:0,39,577	0/0:16,0:16:45.15:0,45,719	0/0:18,0:18:54.15:0,54,811	0/0:21,0:21:63.21:0,63,1007	0/0:15,0:15:45.15:0,45,719	0/0:21,0:21:63.21:0,63,993	0/0:23,0:23:69.24:0,69,1102	0/0:13,0:13:39.13:0,39,618
chr10	66001083	.	GCACA	G	7327.52	PASS	AC=34;AF=0.630;AN=54;BaseQRankSum=5.288;DP=647;FS=1.423;HRun=0;HaplotypeScore=130.9375;InbreedingCoeff=0.9335;MQ=55.95;MQ0=9;MQRankSum=0.603;QD=19.23;ReadPosRankSum=5.441;VQSLOD=4.6186;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:33:59.29:0,59,1110	1/1:4,1:5:9:98,9,0	./.	0/0:33,0:18:3.01:0,3,36	0/0:19,0:21:29.82:0,30,592	1/1:8,6:17:23.59:440,24,0	1/1:13,16:29:30.10:479,30,0	0/0:19,0:16:18.87:0,19,262	1/1:5,0:12:17.94:157,18,0	0/0:20,0:26:60.15:0,60,1037	0/0:8,0:16:21.07:0,21,387	1/1:11,16:28:28.35:456,28,0	0/0:22,0:23:26.05:0,26,1100	1/1:10,16:28:32.63:638,33,0	1/1:7,17:28:50.89:773,51,0	0/0:6,0:16:12.04:0,12,210	1/1:13,10:23:30.09:479,30,0	1/1:11,0:14:6.01:56,6,0	1/1:13,5:15:11.17:190,11,0	1/1:8,22:32:45.15:718,45,0	1/1:21,25:47:39.08:594,39,0	1/1:9,10:20:27.09:411,27,0	0/0:18,0:20:35.59:0,36,691	0/0:35,0:38:77.90:0,78,1527	1/1:2,13:18:27.09:431,27,0	1/1:10,11:22:30.85:436,31,0	1/1:8,17:27:32.59:638,33,0	1/1:1,7:8:21.07:335,21,0
chr10	66001539	.	GA	G	1612.30	PASS	AB=0.872;AC=8;AF=0.143;AN=56;BaseQRankSum=10.701;DP=579;FS=6.617;HRun=10;HaplotypeScore=56.1602;InbreedingCoeff=0.7392;MQ=74.15;MQ0=0;MQRankSum=-0.118;QD=16.45;ReadPosRankSum=1.402;VQSLOD=4.0931;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,1:26:50.36:0,50,761	0/1:3,1:4:14.02:14,0,88	0/1:16,1:17:1.99:2,0,200	0/0:10,0:10:11.94:0,12,97	0/0:21,1:23:36.89:0,37,597	0/0:23,3:25:17.08:0,17,645	0/0:14,1:15:16.06:0,16,405	0/0:31,0:31:72.66:0,73,785	0/0:15,0:15:20.90:0,21,410	1/1:2,24:26:71.98:625,72,0	1/1:2,30:32:86.98:755,87,0	0/0:21,1:22:31.03:0,31,535	0/0:18,0:18:42.11:0,42,465	0/0:12,1:13:12.90:0,13,337	0/0:21,0:21:54.15:0,54,597	1/1:5,14:19:41.98:365,42,0	0/0:22,0:22:63.13:0,63,683	0/0:17,0:17:51.09:0,51,541	0/0:15,0:15:39.11:0,39,431	0/0:34,1:35:61.15:0,61,890	0/0:15,0:15:29.91:0,30,312	0/0:19,2:21:28.08:0,28,528	0/0:23,0:23:63.17:0,63,697	0/0:20,0:20:54.12:0,54,580	0/0:21,1:23:36.88:0,37,603	0/0:26,0:26:57.14:0,57,622	0/0:25,0:26:69.02:0,69,744	0/0:18,0:18:53.96:0,54,570
chr10	66001784	.	G	GCA	1564.36	PASS	AB=0.821;AC=8;AF=0.143;AN=56;BaseQRankSum=-2.476;DP=577;FS=1.419;HRun=0;HaplotypeScore=78.2383;InbreedingCoeff=0.6530;MQ=60.53;MQ0=5;MQRankSum=-1.878;QD=13.15;ReadPosRankSum=-1.888;VQSLOD=3.1442;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:49:80.42:0,80,927	0/0:5,0:5:9.03:0,9,106	0/0:24,0:11:13.55:0,14,112	0/0:21,0:13:7.52:0,8,68	0/0:15,0:16:35.77:0,36,383	0/0:18,0:19:39.39:0,39,419	0/0:20,0:22:47.98:0,48,547	1/1:38,0:38:36.83:298,37,0	0/0:18,0:18:36.11:0,36,426	1/1:6,14:20:6.69:581,7,0	0/1:11,12:25:99:300,0,109	0/0:15,0:15:33.10:0,33,391	0/0:14,0:16:35.77:0,36,383	0/0:16,0:16:32.93:0,33,367	0/0:16,0:18:29.92:0,30,334	1/1:5,15:20:33.11:523,33,0	0/0:27,0:28:23.61:0,24,668	0/0:18,0:19:26.91:0,27,298	0/0:11,0:11:21.06:0,21,249	0/0:15,0:16:38.94:0,39,429	0/0:31,0:32:36.30:0,36,694	0/0:7,0:9:20.30:0,20,160	0/0:12,0:12:30.09:0,30,356	0/0:17,0:19:44.97:0,45,512	0/0:27,0:28:44.97:0,45,512	0/1:15,0:15:8.62:9,0,366	0/0:25,0:25:56.43:0,56,625	0/0:17,0:18:42:0,42,571
chr10	66001795	.	C	CACAT	443.09	PASS	AB=0.852;AC=2;AF=0.036;AN=56;BaseQRankSum=6.063;DP=583;FS=11.519;HRun=0;HaplotypeScore=102.0408;InbreedingCoeff=-0.0420;MQ=57.22;MQ0=9;MQRankSum=2.193;QD=7.26;ReadPosRankSum=1.647;VQSLOD=1.6691;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,135,1904	0/0:4,0:4:12.01:0,12,191	0/0:27,0:11:25.52:0,26,292	0/0:27,0:15:35.95:0,36,382	0/0:14,0:14:39.12:0,39,664	0/0:20,0:19:54.58:0,55,820	0/0:19,0:19:54.15:0,54,933	0/1:25,15:43:99:517,0,338	0/0:16,0:16:45.11:0,45,752	0/0:19,0:19:0.90:0,1,118	0/0:24,0:24:17.01:0,17,312	0/0:16,0:16:48.09:0,48,748	0/0:15,0:15:45.10:0,45,707	0/0:16,0:16:42.09:0,42,672	0/0:17,0:16:45.08:0,45,668	0/1:18,0:18:4.41:4,0,34	0/0:26,0:26:52.70:0,53,1176	0/0:16,0:16:38.82:0,39,564	0/0:10,0:10:24.08:0,24,426	0/0:20,0:20:56.99:0,57,847	0/0:31,0:30:84.06:0,84,1309	0/0:10,0:10:29.79:0,30,356	0/0:13,0:13:39.08:0,39,641	0/0:19,0:19:48.15:0,48,852	0/0:23,0:23:63.13:0,63,979	0/0:21,0:20:53.24:0,53,813	0/0:27,0:27:75.13:0,75,1161	0/0:21,0:21:56.91:0,57,960
chr10	66001886	.	T	TTA	6626.78	PASS	AB=0.733;AC=32;AF=0.593;AN=54;BaseQRankSum=-3.417;DP=332;FS=10.797;HRun=0;HaplotypeScore=71.2774;InbreedingCoeff=0.6937;MQ=62.61;MQ0=3;MQRankSum=-0.717;QD=29.19;ReadPosRankSum=-1.410;VQSLOD=5.3345;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:51.16:0,51,643	1/1:0,5:5:15.05:249,15,0	0/0:5,0:4:2.87:0,3,15	0/0:8,0:3:2.96:0,3,23	0/0:24,0:24:63.20:0,63,793	1/1:4,17:21:30.10:497,30,0	1/1:2,4:6:9.03:150,9,0	1/1:18,16:34:81.18:1158,81,0	0/0:5,0:5:12.04:0,12,151	1/1:8,14:22:20.27:819,20,0	1/1:5,11:16:33.11:527,33,0	1/1:4,1:5:3.01:50,3,0	0/0:4,0:4:12.04:0,12,151	1/1:7,4:11:18.06:292,18,0	0/0:3,0:3:7.79:0,8,30	0/1:4,4:8:25.83:126,0,26	1/1:5,9:14:28.91:449,29,0	0/0:14,0:14:36.12:0,36,454	1/1:2,9:11:30.10:497,30,0	1/1:6,9:15:15.05:249,15,0	1/1:2,6:6:9.03:150,9,0	./.	0/0:12,0:12:30.08:0,30,366	0/0:4,0:4:6.02:0,6,76	1/1:4,7:12:6.02:100,6,0	0/1:9,3:12:46.47:292,0,46	1/1:4,9:13:29.66:480,30,0	1/1:4,9:13:33.11:543,33,0
chr10	66001927	.	CAT	C	2247.01	PASS	AB=0.870;AC=14;AF=0.259;AN=54;BaseQRankSum=-0.469;DP=356;FS=2.684;HRun=0;HaplotypeScore=91.2125;InbreedingCoeff=0.5052;MQ=65.15;MQ0=9;MQRankSum=0.939;QD=19.21;ReadPosRankSum=1.400;VQSLOD=3.4242;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:24.08:0,24,398	0/0:3,0:4:3:0,3,26	0/0:29,0:10:6.67:0,7,64	0/0:41,0:13:7.59:0,8,47	0/0:28,0:28:78.22:0,78,1292	0/0:7,0:17:11.42:0,11,103	0/0:2,0:5:6:0,6,53	1/1:8,24:30:63.19:780,63,0	1/1:0,6:6:12.04:151,12,0	1/1:6,15:21:50.18:600,50,0	0/1:5,15:20:11.29:276,0,11	0/1:4,0:4:5.73:6,0,65	0/0:4,0:4:12.03:0,12,174	0/0:3,0:10:8.04:0,8,58	0/1:2,0:2:0:0,0,0	1/1:0,10:10:18.06:227,18,0	0/0:4,0:11:2.77:0,3,116	1/1:1,11:12:27.09:340,27,0	0/0:5,0:11:12.97:0,13,129	0/0:6,0:7:6:0,6,52	0/0:0,0:3:3:0,3,27	./.	0/0:8,0:8:21.07:0,21,342	0/0:3,0:3:2.97:0,3,20	0/0:5,0:14:11.03:0,11,86	0/1:2,1:10:34.10:34,0,166	0/0:8,0:13:16.72:0,17,135	0/0:3,0:14:19.24:0,19,158
chr10	66001940	.	ATGTATATC	A	278.26	PASS	AB=0.933;AC=11;AF=0.196;AN=56;BaseQRankSum=3.134;DP=380;FS=8.232;HRun=0;HaplotypeScore=128.8078;InbreedingCoeff=-0.2469;MQ=70.14;MQ0=7;MQRankSum=-0.788;QD=1.75;ReadPosRankSum=-4.332;VQSLOD=0.3614;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:42.14:0,42,1444	0/0:3,0:3:6.02:0,6,159	0/0:30,0:13:9.50:0,9,69	0/1:43,0:17:2.35:2,0,27	0/0:30,0:30:84.27:0,84,3216	0/1:16,3:19:9.96:10,0,344	0/0:5,0:5:9.03:0,9,273	0/0:30,0:28:66.44:0,66,1034	0/0:8,0:8:18.05:0,18,414	0/0:19,0:19:39.15:0,39,1194	0/0:18,0:18:33.11:0,33,928	0/1:6,0:6:49.54:50,0,506	0/0:4,0:4:12.04:0,12,526	0/0:10,0:10:11.07:0,11,209	0/1:6,0:6:9.91:10,0,232	0/0:13,0:13:27.09:0,27,720	0/1:10,0:10:52.85:53,0,438	0/0:14,0:14:35.78:0,36,840	0/1:15,0:14:86.77:87,0,767	0/1:3,2:5:15.92:16,0,229	0/0:5,0:5:9.03:0,9,226	0/0:4,0:5:11.91:0,12,223	0/0:10,0:10:30.07:0,30,673	0/0:2,0:2:3.01:0,3,73	0/1:14,2:17:1.86:2,0,566	0/1:8,0:9:37.10:37,0,798	0/1:14,0:14:60.81:61,0,744	0/1:14,0:15:87.66:88,0,697
chr10	66002285	.	A	ATGTGTGTG	4722.76	PASS	AC=32;AF=0.615;AN=52;BaseQRankSum=-2.433;DP=645;FS=0.000;HRun=0;HaplotypeScore=170.7189;InbreedingCoeff=0.7843;MQ=59.13;MQ0=16;MQRankSum=-3.112;QD=14.18;ReadPosRankSum=-5.159;VQSLOD=2.2297;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:34:17.30:0,17,220	1/1:4,0:3:3.01:73,3,0	./.	./.	0/0:16,0:21:8.71:0,9,47	1/1:29,0:29:24.08:563,24,0	1/1:21,0:21:9.50:202,10,0	0/0:32,0:31:4.88:0,5,204	0/0:11,0:15:14.62:0,15,119	0/0:18,0:25:18.06:0,18,280	0/0:19,0:21:3.01:0,3,56	1/1:15,3:21:9.03:349,9,0	0/0:17,0:19:21.07:0,21,485	1/1:15,7:22:11.67:480,12,0	1/1:11,1:18:15.05:440,15,0	0/0:7,0:21:18.53:0,19,336	1/1:23,2:29:21.17:495,21,0	1/1:18,0:20:33.01:585,33,0	1/1:19,0:17:7.27:154,7,0	1/1:10,0:10:6.02:122,6,0	1/1:23,5:31:0.94:1,1,0	1/1:18,0:18:9.03:219,9,0	0/0:19,0:19:18.06:0,18,419	0/0:33,0:33:54.16:0,54,1241	1/1:16,0:16:12.02:235,12,0	1/1:22,0:21:9.03:194,9,0	1/1:19,6:28:3.90:122,4,0	1/1:14,6:22:15.52:490,16,0
chr10	66002646	.	T	TAA	320.37	PASS	AC=20;AF=0.500;AN=40;BaseQRankSum=-1.919;DP=255;FS=0.000;HRun=0;HaplotypeScore=40.3801;InbreedingCoeff=0.6525;MQ=64.48;MQ0=50;MQRankSum=3.878;QD=11.05;ReadPosRankSum=-5.526;VQSLOD=1.9321;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:32:90.30:0,90,1268	./.	0/0:35,0:7:9:0,9,157	0/0:28,0:11:13.15:0,13,113	0/0:15,0:12:27.03:0,27,354	1/1:2,0:1:2.99:24,3,0	1/1:3,0:1:2.99:24,3,0	1/1:1,1:4:12:125,12,0	0/0:19,0:17:48.16:0,48,663	1/1:0,2:2:6.02:103,6,0	./.	./.	0/0:18,0:18:42.14:0,42,584	1/1:1,0:1:3:25,3,0	1/1:2,0:1:3.01:43,3,0	0/0:3,0:1:3.01:0,3,45	./.	0/0:23,0:18:48.14:0,48,618	1/1:4,0:1:3.01:32,3,0	./.	./.	./.	0/0:14,0:13:30.10:0,30,442	0/0:19,0:15:26.44:0,26,352	1/1:2,0:1:3:25,3,0	1/1:4,0:1:3:25,3,0	./.	1/1:4,0:1:3.01:42,3,0
chr10	66004018	.	C	CA	12747.17	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-15.634;DP=762;FS=4.604;HRun=6;HaplotypeScore=79.1243;InbreedingCoeff=0.9954;MQ=94.47;MQ0=0;MQRankSum=-3.912;QD=31.87;ReadPosRankSum=2.869;VQSLOD=5.2020;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,133,1438	1/1:0,4:4:12.04:151,12,0	0/0:31,0:31:66.12:0,66,667	0/0:37,0:37:90.17:0,90,903	0/0:37,0:37:78.10:0,78,778	1/1:3,19:22:54.17:679,54,0	1/1:3,27:30:69.22:868,69,0	0/0:17,0:17:45.10:0,45,459	0/0:27,0:27:81.18:0,81,826	0/0:25,0:25:59.88:0,60,592	0/0:16,0:16:32.81:0,33,335	1/1:4,19:23:57.18:717,57,0	0/0:27,0:27:75.17:0,75,765	1/1:1,27:29:81.09:996,81,0	1/1:1,28:29:78.25:981,78,0	0/0:26,0:26:78.18:0,78,796	1/1:0,40:40:99:1510,120,0	0/0:19,0:19:54.12:0,54,551	1/1:3,20:23:66.19:802,66,0	1/1:5,29:34:78:875,78,0	1/1:4,27:31:78.25:981,78,0	1/1:1,27:28:66.21:830,66,0	0/0:11,0:11:24.05:0,24,244	0/0:35,0:35:99:0,99,1010	1/1:2,19:21:42.13:526,42,0	1/1:4,30:34:81.26:1019,81,0	1/1:2,37:39:99:1321,105,0	1/1:0,13:13:39.12:491,39,0
chr10	66004625	.	GTGTCTGTCTGTC	G	5654.67	PASS	AB=1.000;AC=38;AF=0.704;AN=54;BaseQRankSum=11.535;DP=571;FS=14.326;HRun=0;HaplotypeScore=190.9679;InbreedingCoeff=0.6591;MQ=65.54;MQ0=13;MQRankSum=-5.434;QD=17.08;ReadPosRankSum=0.327;VQSLOD=3.1397;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:45:81.26:0,81,3463	1/1:5,0:5:3.01:81,3,0	0/0:28,0:15:13.58:0,14,154	0/0:52,0:32:21.07:0,21,431	0/0:24,0:23:36.08:0,36,1041	1/1:21,0:21:18.01:369,18,0	1/1:20,0:20:29.44:461,29,0	0/1:34,0:34:68.08:170,0,68	1/1:23,0:23:24.03:566,24,0	1/1:4,10:14:23.99:486,24,0	1/1:3,7:10:3.01:53,3,0	1/1:11,0:11:18.03:272,18,0	0/0:22,0:22:33.10:0,33,1175	1/1:18,0:18:18.06:505,18,0	1/1:20,0:20:8.87:236,9,0	1/1:5,16:21:18.06:612,18,0	1/1:19,0:19:9.03:223,9,0	0/1:17,0:17:87.12:87,0,138	1/1:10,0:6:9.01:156,9,0	1/1:9,0:9:3.01:53,3,0	./.	1/1:15,0:15:3.01:64,3,0	0/0:15,0:15:24.08:0,24,876	0/0:34,0:34:60.19:0,60,2690	1/1:21,0:21:12.04:256,12,0	1/1:18,0:18:24.07:503,24,0	1/1:20,0:19:15.05:392,15,0	1/1:5,0:5:6.02:111,6,0
chr10	66004647	.	GTCTGTCTGTCTGTCTGTC	G	8767.55	PASS	AB=1.000;AC=34;AF=0.607;AN=56;BaseQRankSum=9.676;DP=575;FS=5.805;HRun=0;HaplotypeScore=227.0780;InbreedingCoeff=0.7485;MQ=51.17;MQ0=30;MQRankSum=-4.965;QD=28.75;ReadPosRankSum=1.622;VQSLOD=3.5209;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,141,7299	1/1:1,4:4:3.01:151,3,0	0/0:20,0:8:17.25:0,17,281	0/0:35,0:15:32.09:0,32,749	0/0:20,0:19:48.12:0,48,1665	1/1:9,16:23:27.09:896,27,0	1/1:23,0:23:34.38:716,34,0	0/0:41,0:37:58.04:0,58,808	1/1:4,13:17:27.09:1111,27,0	0/1:16,0:15:51.78:52,0,266	0/0:13,0:12:12.02:0,12,225	1/1:18,0:17:27.08:527,27,0	0/0:21,0:21:60.09:0,60,2316	1/1:4,16:19:21.07:961,21,0	1/1:8,12:18:14.72:517,15,0	0/0:22,0:22:19.63:0,20,281	1/1:5,13:17:11.94:417,12,0	0/1:18,0:16:31.93:32,0,315	1/1:12,8:15:25.51:510,26,0	1/1:11,0:11:5.60:106,6,0	1/1:16,0:12:2.71:19,3,0	1/1:4,8:10:6.02:169,6,0	0/0:12,0:12:30.10:0,30,1402	0/0:34,0:33:87.28:0,87,4554	1/1:7,16:21:12.04:469,12,0	1/1:4,12:16:39.11:1081,39,0	1/1:2,17:19:21.07:814,21,0	1/1:8,0:4:12.04:219,12,0
chr10	66004649	.	CTGTCTGTCTGTCTG	C	6663.57	PASS	AB=1.000;AC=34;AF=0.607;AN=56;BaseQRankSum=12.093;DP=577;FS=5.466;HRun=0;HaplotypeScore=205.1442;InbreedingCoeff=0.6001;MQ=50.81;MQ0=33;MQRankSum=-5.732;QD=20.32;ReadPosRankSum=2.348;VQSLOD=3.5087;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,144,6057	1/1:5,0:4:3.01:102,3,0	0/0:20,0:9:20.26:0,20,314	0/0:34,0:15:32.09:0,32,707	0/0:22,0:21:54.13:0,54,1578	1/1:23,0:22:26.33:536,26,0	1/1:24,0:23:36.57:700,37,0	0/0:38,0:34:26.24:0,26,721	1/1:17,0:18:27.01:750,27,0	0/1:17,0:16:99:184,0,203	0/0:13,0:12:10.26:0,10,120	1/1:18,0:17:26.94:466,27,0	0/0:21,0:21:47.93:0,48,1988	1/1:18,0:17:20.96:648,21,0	1/1:19,0:17:14.07:320,14,0	0/1:22,0:22:99:241,0,149	1/1:18,0:17:11.94:300,12,0	0/1:17,0:15:99:128,0,226	0/1:21,0:15:35.48:314,0,35	1/1:6,6:10:5.97:89,6,0	1/1:16,0:12:2.69:19,3,0	1/1:12,0:10:5.61:95,6,0	0/0:13,0:13:30.10:0,30,1249	0/0:33,0:32:87.27:0,87,3809	1/1:23,0:21:12.01:297,12,0	1/1:15,0:15:40.18:761,40,0	1/1:20,0:18:20.61:529,21,0	1/1:8,0:4:11.91:185,12,0
chr10	66004651	.	GTCTGTCTGTCTGTC	G	7094.24	PASS	AB=0.949;AC=34;AF=0.607;AN=56;BaseQRankSum=13.201;DP=568;FS=5.575;HRun=0;HaplotypeScore=201.4896;InbreedingCoeff=0.4876;MQ=50.29;MQ0=33;MQRankSum=-4.897;QD=19.33;ReadPosRankSum=1.823;VQSLOD=3.5803;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,132,5609	1/1:5,0:4:3.01:103,3,0	0/0:18,0:8:16.60:0,17,198	0/0:33,0:12:21.07:0,21,431	0/0:20,0:19:45.11:0,45,1304	1/1:25,0:22:27.09:604,27,0	1/1:25,0:24:37.48:565,37,0	0/1:40,0:35:99:128,0,320	1/1:18,0:18:27.03:752,27,0	0/1:17,0:16:99:337,0,223	0/0:12,0:11:0.18:0,0,83	1/1:17,0:16:24.05:346,24,0	0/0:21,0:21:12.23:0,12,1658	1/1:18,0:17:21.07:669,21,0	1/1:18,0:16:14.84:371,15,0	0/1:23,0:23:99:296,0,192	0/1:19,0:18:14.25:287,0,14	0/1:9,7:14:99:233,0,161	1/1:20,0:15:9.50:355,10,0	1/1:12,0:10:6.02:88,6,0	0/1:16,0:12:0.01:0,0,0	1/1:12,0:10:6.02:120,6,0	0/0:13,0:13:30.10:0,30,1086	0/0:34,0:33:87.28:0,87,3548	1/1:23,0:21:12.04:320,12,0	1/1:15,0:15:39.11:768,39,0	1/1:20,0:18:21.07:571,21,0	1/1:8,0:4:12.04:182,12,0
chr10	66004657	.	CTGTCTG	C	3830.38	PASS	AB=1.000;AC=36;AF=0.643;AN=56;BaseQRankSum=13.077;DP=563;FS=3.441;HRun=0;HaplotypeScore=158.2105;InbreedingCoeff=0.5646;MQ=47.01;MQ0=32;MQRankSum=-5.887;QD=10.11;ReadPosRankSum=0.953;VQSLOD=2.8911;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,135,2989	1/1:5,0:4:3.01:54,3,0	0/0:13,0:6:5.45:0,5,68	0/0:27,0:7:17.90:0,18,226	0/0:17,0:16:36.11:0,36,692	1/1:26,0:22:26.22:268,26,0	1/1:22,0:21:28.46:285,28,0	1/1:25,15:34:41.78:511,42,0	1/1:19,0:18:26.51:337,27,0	0/1:18,0:17:99:157,0,210	0/0:12,0:11:8.94:0,9,87	1/1:18,0:16:17.85:201,18,0	0/0:18,0:18:35.94:0,36,930	1/1:18,0:17:20.96:270,21,0	1/1:18,0:16:14.18:152,14,0	0/1:25,0:25:99:154,0,171	1/1:22,0:19:6.98:137,7,0	0/1:16,0:14:87.52:92,0,88	0/1:21,0:16:44.65:117,0,45	1/1:14,0:11:8.30:64,8,0	1/1:16,0:13:2.60:11,3,0	1/1:13,0:11:5.61:55,6,0	0/0:13,0:13:30.08:0,30,560	0/0:33,0:32:84.28:0,84,1971	1/1:23,0:21:12.04:192,12,0	1/1:16,0:15:34.17:384,34,0	1/1:20,0:18:20.61:280,21,0	1/1:8,0:4:11.91:110,12,0
chr10	66004663	.	GTC	G	2099.39	PASS	AB=0.952;AC=35;AF=0.625;AN=56;BaseQRankSum=11.028;DP=586;FS=0.511;HRun=0;HaplotypeScore=139.4355;InbreedingCoeff=0.6468;MQ=46.80;MQ0=34;MQRankSum=-6.541;QD=6.05;ReadPosRankSum=3.183;VQSLOD=2.6559;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:53,1:54:99:0,126,1825	1/1:5,0:4:2.96:19,3,0	0/0:15,0:4:2.86:0,3,44	0/1:28,0:5:0:0,0,0	0/0:17,0:16:24.08:0,24,352	1/1:26,0:22:26.07:242,26,0	1/1:22,0:21:11.84:141,12,0	0/0:44,0:36:35.56:0,36,206	1/1:20,0:18:23.15:186,23,0	0/0:18,0:17:18.11:0,18,300	0/0:13,0:12:12.03:0,12,153	1/1:15,0:13:11.97:124,12,0	0/1:15,3:18:5.82:6,0,373	1/1:18,0:17:20.91:166,21,0	1/1:19,0:17:16.93:156,17,0	0/0:27,0:27:13.58:0,14,258	1/1:22,0:19:3.16:103,3,0	0/1:17,0:15:12.26:194,0,12	1/1:23,0:17:3.50:199,3,0	1/1:14,0:11:6.02:71,6,0	1/1:18,0:15:8.64:95,9,0	1/1:13,0:11:4.56:39,5,0	0/0:12,0:12:9.13:0,9,169	0/0:36,3:38:9.34:0,9,1059	1/1:23,0:21:6.87:26,7,0	1/1:17,0:15:26.94:262,27,0	1/1:20,0:18:19.69:157,20,0	1/1:9,0:5:9.03:107,9,0
chr10	66005579	.	C	CA	12513.30	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-17.896;DP=710;FS=1.969;HRun=6;HaplotypeScore=60.6123;InbreedingCoeff=0.9997;MQ=79.63;MQ0=0;MQRankSum=-1.005;QD=33.73;ReadPosRankSum=1.212;VQSLOD=4.9588;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,102,1040	1/1:1,9:10:27.09:340,27,0	0/0:26,0:26:63.07:0,63,613	0/0:16,0:16:27.19:0,27,350	0/0:31,0:31:87.20:0,87,888	1/1:3,17:20:51.16:642,51,0	1/1:0,16:16:45.14:566,45,0	0/0:32,0:32:87.18:0,87,878	0/0:29,0:29:75.16:0,75,765	0/0:33,0:33:87.18:0,87,879	0/0:22,0:22:66.15:0,66,673	1/1:2,24:26:72.23:906,72,0	0/0:16,0:16:42.09:0,42,429	1/1:2,24:26:72.23:903,72,0	1/1:2,33:35:87.28:1095,87,0	0/0:29,0:29:84.19:0,84,857	1/1:0,31:31:84.27:1057,84,0	0/0:20,0:20:54.10:0,54,542	1/1:1,15:16:45.14:565,45,0	1/1:4,24:28:72.19:888,72,0	1/1:0,24:24:60.19:755,60,0	1/1:1,28:29:81.26:1019,81,0	0/0:28,0:28:72.16:0,72,734	0/0:21,0:21:55.30:0,55,570	1/1:0,27:27:75.24:944,75,0	1/1:4,33:37:71.71:1212,72,0	1/1:0,28:28:75.24:943,75,0	1/1:0,18:18:54.17:679,54,0
chr10	66006818	.	AACACACAC	A	1089.89	PASS	AB=1.000;AC=27;AF=0.614;AN=44;BaseQRankSum=3.299;DP=456;FS=1.438;HRun=0;HaplotypeScore=117.3902;InbreedingCoeff=0.4739;MQ=58.32;MQ0=10;MQRankSum=-2.237;QD=4.62;ReadPosRankSum=-0.235;VQSLOD=2.0635;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:23:24.08:0,24,706	1/1:9,0:10:3.01:56,3,0	./.	./.	0/0:8,0:8:6.02:0,6,136	1/1:21,0:21:3.01:36,3,0	1/1:16,0:14:6.01:65,6,0	./.	1/1:6,0:7:2.60:55,3,0	0/0:18,0:16:3:0,3,26	./.	1/1:15,0:17:3:56,3,0	0/0:9,0:9:12.04:0,12,380	1/1:8,5:13:3.01:74,3,0	1/1:18,5:24:7.89:137,8,0	1/1:11,0:11:3.01:74,3,0	0/1:17,0:17:0.10:16,0,0	0/0:17,0:17:0.47:0,0,1	./.	1/1:19,5:24:12.04:256,12,0	1/1:38,0:38:1.09:33,1,0	1/1:10,5:15:9.50:223,10,0	0/0:10,0:10:3.01:0,3,122	0/0:24,0:24:24.79:0,25,623	1/1:9,1:10:3.01:74,3,0	0/0:13,0:12:4.66:0,5,19	1/1:11,1:12:3.89:76,4,0	./.
chr10	66009420	.	A	ATGTGTGTGTGTGTGTG	7954.27	PASS	AB=0.908;AC=32;AF=0.640;AN=50;BaseQRankSum=6.127;DP=438;FS=4.246;HRun=0;HaplotypeScore=214.0981;InbreedingCoeff=0.5955;MQ=59.17;MQ0=3;MQRankSum=-6.073;QD=26.69;ReadPosRankSum=-2.423;VQSLOD=3.2878;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:19:16.20:0,16,1078	0/1:6,0:5:0:0,0,0	0/1:22,0:19:24.45:24,0,412	0/0:23,0:16:17.86:0,18,477	0/0:17,0:17:33.08:0,33,952	0/1:14,6:21:0.01:0,0,0	1/1:7,0:7:6:111,6,0	1/1:27,0:26:40.13:706,40,0	1/1:10,0:11:5.85:122,6,0	1/1:13,0:15:20.87:360,21,0	./.	1/1:13,1:13:5.90:59,6,0	0/0:10,0:9:21.07:0,21,788	1/1:6,6:12:5.83:185,6,0	0/1:9,7:16:0:0,0,0	1/1:7,0:17:5.50:60,6,0	0/1:22,0:22:24.51:521,0,25	1/1:14,0:15:24.08:859,24,0	1/1:16,1:17:27.06:1049,27,0	0/1:11,0:10:0:0,0,0	./.	./.	0/0:16,0:16:39.12:0,39,1461	0/0:18,0:18:24.46:0,24,1413	1/1:15,0:15:3.01:75,3,0	1/1:19,0:19:20.13:1751,20,0	1/1:14,0:13:24.06:1119,24,0	1/1:16,1:17:21.07:953,21,0
chr10	66009428	.	GTGTGTGTGTATATATA	G	1879.95	PASS	AB=0.996;AC=15;AF=0.288;AN=52;BaseQRankSum=0.552;DP=440;FS=21.601;HRun=0;HaplotypeScore=193.3380;InbreedingCoeff=-0.3433;MQ=47.85;MQ0=8;MQRankSum=-1.414;QD=8.17;ReadPosRankSum=3.153;VQSLOD=1.3862;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:20:30.99:0,31,1538	0/0:7,0:6:3.01:0,3,180	0/1:16,0:13:18.43:18,0,509	0/0:21,0:14:18.03:0,18,584	0/0:21,0:21:51.16:0,51,3044	0/0:20,0:20:2.52:0,3,179	0/1:7,0:7:77.92:78,0,398	0/1:31,0:26:99:283,0,1084	0/1:10,0:10:62.90:63,0,154	0/1:16,0:16:25.36:25,0,882	0/0:11,0:10:5.93:0,6,39	0/1:13,0:12:65.44:65,0,306	0/0:8,0:7:18.06:0,18,1107	0/0:14,0:14:8.34:0,8,564	0/0:16,0:16:2.33:0,2,135	0/1:15,0:15:58.99:59,0,182	0/1:21,0:21:99:274,0,285	0/1:12,0:12:99:228,0,491	0/1:18,0:18:99:304,0,949	0/0:11,0:10:2.53:0,3,229	./.	./.	0/0:19,0:19:48.16:0,48,3224	0/0:16,0:16:39:0,39,2068	1/1:14,0:14:3.01:75,3,0	0/1:19,1:19:99:209,0,2034	0/1:15,0:14:99:228,0,632	0/1:22,0:21:99:114,0,1064
chr10	66009436	.	GTATATATA	G	1707.41	PASS	AB=0.902;AC=15;AF=0.278;AN=54;BaseQRankSum=0.967;DP=438;FS=25.851;HRun=0;HaplotypeScore=149.6916;InbreedingCoeff=-0.3150;MQ=44.13;MQ0=14;MQRankSum=-1.251;QD=7.23;ReadPosRankSum=0.111;VQSLOD=1.1931;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:18:36.12:0,36,1312	0/0:7,0:6:3.01:0,3,124	0/1:14,0:11:18.43:18,0,541	0/0:17,0:10:18.03:0,18,505	0/0:18,0:18:51.16:0,51,1987	0/0:17,0:18:5.92:0,6,220	0/1:7,0:7:77.94:78,0,237	0/1:29,4:29:99:277,0,919	0/1:6,2:8:58.17:58,0,159	0/1:20,0:18:24.24:24,0,657	0/0:11,0:10:8.94:0,9,69	0/1:7,4:10:65.44:65,0,178	0/0:11,0:10:27.09:0,27,1022	0/0:14,0:14:8.71:0,9,348	0/0:13,0:13:5.79:0,6,194	0/1:15,0:15:55.99:56,0,131	0/1:20,1:21:99:198,0,195	0/1:11,2:12:99:302,0,235	0/1:15,3:18:99:292,0,918	0/0:11,2:12:2.87:0,3,136	0/0:15,0:12:3.48:0,3,90	./.	0/0:19,0:19:48.16:0,48,2059	0/0:15,0:15:39.03:0,39,1402	1/1:13,2:14:3.01:75,3,0	0/1:19,1:19:96.50:97,0,1369	0/1:13,4:16:99:206,0,375	0/1:20,4:23:99:111,0,704
chr10	66009474	.	ATATGTG	A	605.62	PASS	AB=0.871;AC=2;AF=0.037;AN=54;BaseQRankSum=0.761;DP=404;FS=16.152;HRun=0;HaplotypeScore=128.3389;InbreedingCoeff=0.0492;MQ=46.38;MQ0=11;MQRankSum=-1.945;QD=8.65;ReadPosRankSum=-3.272;VQSLOD=0.7997;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:16:33.11:0,33,966	0/0:5,0:5:3.01:0,3,83	0/0:20,0:10:29.77:0,30,708	0/0:7,0:2:3.01:0,3,81	0/0:15,0:15:45.14:0,45,1370	0/0:19,0:20:21.03:0,21,539	0/0:7,0:7:6:0,6,171	0/1:32,17:45:99:679,0,889	0/0:6,0:6:9.49:0,9,134	0/0:16,0:14:20.91:0,21,385	0/0:7,0:6:11.95:0,12,99	0/0:6,0:6:9.03:0,9,240	0/0:7,0:7:18.06:0,18,639	0/0:10,0:10:8.48:0,8,256	0/0:6,0:6:5.99:0,6,171	0/0:10,0:10:8.51:0,9,127	0/0:28,0:27:11.06:0,11,223	0/0:13,0:13:9.13:0,9,596	0/0:18,0:17:41.96:0,42,611	0/0:15,0:15:5.92:0,6,104	0/0:10,0:8:3.01:0,3,86	./.	0/0:17,0:17:42.05:0,42,1084	0/0:11,0:11:5.49:0,5,648	0/1:21,0:20:0:0,0,0	0/0:18,0:17:5.22:0,5,859	0/0:13,0:12:11.98:0,12,220	0/0:24,0:24:15.05:0,15,344
chr10	66009476	.	A	ATG	2675.18	PASS	AB=0.625;AC=37;AF=0.685;AN=54;BaseQRankSum=4.929;DP=400;FS=8.979;HRun=0;HaplotypeScore=108.9554;InbreedingCoeff=0.7362;MQ=47.04;MQ0=11;MQRankSum=-1.974;QD=9.10;ReadPosRankSum=2.098;VQSLOD=2.8811;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:16:27.04:0,27,310	1/1:3,3:6:3.01:50,3,0	0/0:20,0:10:26.87:0,27,288	0/0:7,0:2:3.01:0,3,38	0/0:15,0:15:36.11:0,36,448	1/1:15,4:19:20.90:347,21,0	1/1:6,0:6:9.02:125,9,0	1/1:49,0:45:15.97:106,16,0	0/0:6,0:6:5.57:0,6,41	1/1:7,0:14:10.42:81,10,0	1/1:1,0:7:10.68:44,11,0	1/1:2,4:6:9.02:120,9,0	0/0:7,0:7:18.06:0,18,229	1/1:4,6:10:8.82:150,9,0	1/1:3,3:6:6.02:100,6,0	1/1:7,0:10:2.11:11,2,0	1/1:4,24:27:9.49:134,9,0	1/1:12,0:13:27:250,27,0	1/1:7,10:17:29.95:416,30,0	1/1:1,12:13:6.02:84,6,0	1/1:9,1:8:3.01:50,3,0	./.	0/0:16,0:16:27.09:0,27,342	0/0:10,0:10:23.06:0,23,240	0/1:8,12:19:0:0,0,0	1/1:8,10:17:33.06:493,33,0	1/1:5,9:13:6.02:100,6,0	1/1:5,19:24:12.04:199,12,0
chr10	66009570	.	G	GTA	685.76	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-4.960;DP=376;FS=11.578;HRun=0;HaplotypeScore=55.6407;InbreedingCoeff=0.8683;MQ=65.02;MQ0=0;MQRankSum=-1.038;QD=27.43;ReadPosRankSum=2.051;VQSLOD=3.7678;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:54.17:0,54,682	0/0:7,0:8:20.90:0,21,243	0/0:7,0:6:11.88:0,12,113	0/0:7,0:7:5.55:0,6,76	0/0:9,0:9:27.09:0,27,343	0/0:17,0:16:42.12:0,42,520	0/0:5,0:5:15.05:0,15,191	0/0:31,0:31:60.17:0,60,727	1/1:0,6:6:12.04:201,12,0	0/0:21,0:21:63.19:0,63,782	0/0:15,0:15:42.11:0,42,507	0/0:7,0:7:12.04:0,12,153	0/0:7,0:7:15.05:0,15,191	0/0:14,0:14:42.09:0,42,492	0/0:14,0:14:36.09:0,36,431	0/0:7,0:7:21.01:0,21,208	0/0:29,0:29:78.23:0,78,975	1/1:3,16:19:36.12:601,36,0	0/0:16,0:16:33.05:0,33,377	0/0:14,0:14:39.11:0,39,480	0/0:6,0:6:15.03:0,15,177	0/0:7,0:7:21.04:0,21,239	0/0:8,0:8:24.06:0,24,292	0/0:7,0:7:18.06:0,18,228	0/0:21,0:21:63.19:0,63,788	0/0:24,0:24:60.19:0,60,764	0/0:11,0:11:27.09:0,27,343	0/0:16,0:16:39.10:0,39,481
chr10	66010055	.	T	TG	788.20	PASS	AB=0.871;AC=26;AF=0.464;AN=56;BaseQRankSum=-1.642;DP=340;FS=3.112;HRun=10;HaplotypeScore=100.3479;InbreedingCoeff=0.2025;MQ=87.32;MQ0=0;MQRankSum=-3.543;QD=4.19;ReadPosRankSum=-4.398;VQSLOD=0.3053;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:29.14:0,29,211	1/1:6,0:6:2.97:20,3,0	0/0:16,0:16:3.48:0,3,101	0/1:22,0:20:5.48:5,0,77	0/1:9,0:11:14.78:15,0,26	0/1:8,1:9:34.97:35,0,59	0/1:23,4:27:95.09:145,0,95	0/0:15,0:15:20.93:0,21,171	0/0:3,0:22:42.29:0,42,121	0/1:8,1:9:9.96:66,0,10	1/1:4,1:5:0.54:28,1,0	1/1:10,3:13:12.75:111,13,0	0/0:15,0:15:21.28:0,21,181	0/1:6,6:12:15.59:51,0,16	1/1:5,1:6:12.60:84,13,0	0/1:4,5:9:12.60:84,0,13	1/1:15,3:19:12.58:128,13,0	0/0:3,0:13:20.84:0,21,59	0/0:3,0:4:4.39:0,4,13	0/1:2,0:2:0:0,0,0	1/1:8,5:13:5.97:52,6,0	1/1:1,1:2:3.01:32,3,0	0/0:13,0:13:20.81:0,21,161	0/0:17,0:18:34.24:0,34,258	0/0:10,2:12:8.71:0,9,63	0/1:8,1:9:18.14:26,0,18	0/1:8,2:10:8.48:12,0,8	1/1:2,2:4:8.79:68,9,0
chr10	66011967	.	T	TG	15685.82	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-16.268;DP=626;FS=5.196;HRun=2;HaplotypeScore=55.3923;InbreedingCoeff=0.9969;MQ=86.03;MQ0=0;MQRankSum=-4.057;QD=39.12;ReadPosRankSum=1.762;VQSLOD=5.4162;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,123,1506	1/1:0,6:6:18.06:258,18,0	0/0:20,0:20:54.11:0,54,633	0/0:25,0:25:66.20:0,66,792	0/0:13,0:13:39.12:0,39,483	1/1:1,26:27:72.24:1037,72,0	1/1:4,28:32:84.28:1210,84,0	1/1:3,14:17:42.14:598,42,0	1/1:1,16:17:42.14:605,42,0	0/0:19,0:19:57.18:0,57,706	0/0:14,0:14:39.12:0,39,484	1/1:0,25:25:69.23:994,69,0	0/0:21,0:21:63.20:0,63,780	1/1:1,21:22:60.20:864,60,0	1/1:1,24:25:69.23:994,69,0	0/0:18,0:18:54.14:0,54,644	1/1:1,36:37:99:1555,108,0	1/1:0,36:36:99:1426,99,0	1/1:2,17:19:54.18:777,54,0	1/1:1,15:16:42.14:605,42,0	1/1:0,30:30:90.30:1296,90,0	1/1:2,20:22:51.17:735,51,0	0/0:23,0:23:63.20:0,63,781	0/0:29,0:29:84.26:0,84,1041	1/1:0,24:24:69.23:992,69,0	1/1:2,18:20:16.94:675,17,0	1/1:1,17:18:51.17:721,51,0	1/1:0,8:8:24.08:346,24,0
chr10	66013406	.	T	TA	815.75	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-0.402;DP=653;FS=1.854;HRun=0;HaplotypeScore=85.3967;InbreedingCoeff=0.9401;MQ=73.77;MQ0=0;MQRankSum=-0.931;QD=31.37;ReadPosRankSum=0.173;VQSLOD=3.2801;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,129,1703	0/0:13,0:13:39.11:0,39,513	0/0:22,0:20:54.16:0,54,713	0/0:23,0:23:48.15:0,48,636	0/0:24,0:24:72.22:0,72,975	0/0:22,0:22:66.20:0,66,892	0/0:22,0:22:66.20:0,66,904	0/0:21,0:21:63.20:0,63,853	1/1:1,25:26:57.19:911,57,0	0/0:22,0:22:66.22:0,66,923	0/0:32,0:32:96.31:0,96,1327	0/0:20,0:20:60.20:0,60,839	0/0:20,0:20:60.16:0,60,816	0/0:22,0:22:66.22:0,66,923	0/0:23,0:23:69.21:0,69,932	0/0:19,1:20:9.23:0,9,676	0/0:26,0:26:78.25:0,78,1072	0/0:14,0:14:42.09:0,42,545	0/0:19,0:19:57.18:0,57,781	0/0:40,0:40:99:0,120,1667	0/0:23,0:23:69.20:0,69,924	0/0:26,0:26:78.25:0,78,1075	0/0:23,0:23:69.23:0,69,965	0/0:28,0:28:81.20:0,81,1075	0/0:25,0:25:69.23:0,69,965	0/0:31,0:31:93.31:0,93,1300	0/0:17,0:17:51.16:0,51,693	0/0:6,0:6:18.06:0,18,252
chr10	66014064	.	CT	C	7327.56	PASS	AB=0.689;AC=18;AF=0.321;AN=56;BaseQRankSum=18.842;DP=859;FS=5.552;HRun=3;HaplotypeScore=155.6479;InbreedingCoeff=-0.4737;MQ=66.88;MQ0=0;MQRankSum=-11.429;QD=12.34;ReadPosRankSum=4.397;VQSLOD=3.6076;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,117,1685	0/1:6,9:14:99:220,0,180	0/0:27,0:25:63.08:0,63,826	0/0:28,0:28:42.07:0,42,892	0/0:22,0:22:60.20:0,60,860	0/1:20,21:41:99:585,0,678	0/1:35,20:55:99:586,0,1110	0/1:34,29:63:99:800,0,1087	0/1:13,13:26:99:413,0,362	0/0:26,0:26:78.26:0,78,1122	0/0:12,0:12:33.11:0,33,475	0/1:24,15:39:99:406,0,921	0/0:35,0:35:99:0,105,1512	0/1:20,19:39:99:486,0,674	0/1:13,22:35:99:674,0,441	0/0:23,1:24:35.10:0,35,957	0/1:17,18:35:99:535,0,528	0/1:15,14:29:99:439,0,461	0/1:21,8:29:99:234,0,475	0/1:14,5:19:97.39:97,0,508	0/1:32,20:52:99:252,0,911	0/1:19,16:35:99:420,0,675	0/0:18,0:18:51.16:0,51,716	0/0:34,0:34:96.31:0,96,1361	0/1:13,15:28:99:444,0,353	0/1:12,10:22:99:308,0,394	0/1:16,12:28:99:364,0,560	0/1:2,2:4:62.25:62,0,74
chr10	66014732	.	A	ATC	1073.12	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=0.832;DP=678;FS=1.734;HRun=0;HaplotypeScore=144.9819;InbreedingCoeff=0.9996;MQ=91.73;MQ0=0;MQRankSum=-2.320;QD=41.27;ReadPosRankSum=2.155;VQSLOD=5.0484;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,105,1438	0/0:11,0:11:33.11:0,33,453	0/0:30,0:30:64.29:0,64,936	0/0:29,0:29:71.27:0,71,899	0/0:28,0:28:78.26:0,78,1068	0/0:15,0:15:45.13:0,45,600	0/0:22,0:22:66.20:0,66,889	0/0:30,0:30:84.27:0,84,1138	1/1:4,22:26:66.23:1168,66,0	0/0:26,0:26:63.21:0,63,865	0/0:18,0:18:42.14:0,42,577	0/0:25,0:25:66.20:0,66,873	0/0:27,0:27:78.26:0,78,1070	0/0:16,0:16:42.12:0,42,552	0/0:18,0:18:51.16:0,51,684	0/0:24,0:24:72.23:0,72,973	0/0:29,0:29:84.28:0,84,1153	0/0:33,0:33:99:0,99,1356	0/0:23,0:23:48.14:0,48,640	0/0:24,0:24:63.21:0,63,865	0/0:20,0:20:57.19:0,57,768	0/0:27,0:27:81.26:0,81,1092	0/0:24,0:24:63.19:0,63,848	0/0:28,0:28:81.26:0,81,1095	0/0:28,0:28:81.26:0,81,1096	0/0:21,0:21:57.19:0,57,781	0/0:21,0:21:51.09:0,51,617	0/0:17,0:17:45.13:0,45,601
chr10	66015801	.	CAAAAA	C	6043.84	PASS	AB=0.657;AC=32;AF=0.571;AN=56;BaseQRankSum=7.150;DP=554;FS=0.846;HRun=19;HaplotypeScore=111.4707;InbreedingCoeff=0.8660;MQ=72.30;MQ0=6;MQRankSum=-8.120;QD=18.89;ReadPosRankSum=8.248;VQSLOD=0.9899;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:26:63.19:0,63,1345	1/1:6,5:11:11.49:149,11,0	0/0:31,0:18:23.18:0,23,334	0/0:19,0:11:14.89:0,15,202	0/0:20,0:22:41.81:0,42,794	1/1:3,13:19:26.94:530,27,0	1/1:6,12:20:17.71:333,18,0	1/1:9,12:21:36.79:500,37,0	0/1:5,10:19:0.52:408,0,1	0/0:14,0:18:54.17:0,54,977	0/0:17,0:19:42.14:0,42,896	1/1:5,9:15:29.69:406,30,0	0/0:17,0:18:36.12:0,36,781	1/1:6,6:13:14.34:196,14,0	1/1:8,10:21:9.73:298,10,0	0/0:23,0:25:54.18:0,54,1054	1/1:8,24:33:56.68:774,57,0	0/0:10,0:13:21.07:0,21,352	0/1:11,3:17:36.60:199,0,37	1/1:4,6:12:23.37:289,23,0	1/1:6,12:21:23.10:282,23,0	1/1:10,8:20:20.02:266,20,0	0/0:19,0:20:48.16:0,48,1107	0/0:16,0:22:33.11:0,33,665	1/1:5,11:17:20.66:359,21,0	1/1:11,9:21:26.33:362,26,0	1/1:10,16:27:33.52:433,34,0	1/1:6,6:13:19.81:260,20,0
chr10	66016893	.	C	CAGG	25498.27	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-13.917;DP=703;FS=0.304;HRun=0;HaplotypeScore=95.5276;InbreedingCoeff=0.9741;MQ=73.98;MQ0=0;MQRankSum=-5.566;QD=54.37;ReadPosRankSum=0.822;VQSLOD=6.7537;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,126,2088	1/1:0,13:13:30.06:638,30,0	0/0:19,0:19:54.09:0,54,845	0/0:17,0:17:39.13:0,39,609	0/0:23,0:23:60.19:0,60,991	1/1:2,19:21:54.10:1147,54,0	1/1:5,32:38:99:2205,99,0	1/1:9,25:37:99:2334,108,0	1/1:1,20:22:54.18:1178,54,0	0/0:28,0:28:75.26:0,75,1266	0/0:19,0:19:53.97:0,54,865	1/1:1,19:20:51.13:1092,51,0	0/0:23,0:23:66.23:0,66,1126	1/1:3,21:24:60.21:1382,60,0	1/1:2,28:32:69.11:1443,69,0	0/0:17,0:17:48.16:0,48,819	1/1:3,39:44:99:2353,105,0	1/1:5,42:48:99:2523,111,0	1/1:3,17:21:43.63:1240,44,0	1/1:3,18:21:48.16:1076,48,0	1/1:4,34:38:75.21:1614,75,0	1/1:1,12:13:33.11:677,33,0	0/0:17,0:17:39.12:0,39,638	0/0:28,0:28:81.28:0,81,1374	1/1:0,15:16:42.10:885,42,0	1/1:2,28:30:83.98:1828,84,0	1/1:6,23:29:84.24:1812,84,0	1/1:0,1:2:3.01:69,3,0
chr10	66017674	.	AG	A	1073.80	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.770;DP=762;FS=16.231;HRun=1;HaplotypeScore=72.6775;InbreedingCoeff=0.8508;MQ=82.47;MQ0=1;MQRankSum=-2.457;QD=30.68;ReadPosRankSum=0.498;VQSLOD=2.1011;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,141,2224	0/0:13,0:13:39.13:0,39,624	0/0:21,0:21:60.20:0,60,943	0/0:25,0:24:59.37:0,59,1001	0/0:26,0:26:75.26:0,75,1197	0/0:22,0:22:66.23:0,66,1055	0/0:34,0:34:99:0,102,1606	0/0:31,0:31:93.32:0,93,1486	1/1:1,34:35:42.33:1169,42,0	0/0:24,0:24:69.23:0,69,1084	0/0:14,0:14:42.14:0,42,669	0/0:28,0:28:84.27:0,84,1319	0/0:35,0:35:99:0,105,1679	0/0:31,0:31:93.32:0,93,1487	0/0:38,0:38:99:0,114,1798	0/0:35,0:35:99:0,105,1667	0/0:29,0:29:84.26:0,84,1310	0/0:22,0:22:66.23:0,66,1055	0/0:27,0:26:78.26:0,78,1225	0/0:21,0:21:63.21:0,63,1007	0/0:46,0:46:99:0,135,2158	0/0:20,0:20:60.20:0,60,955	0/0:28,0:28:84.29:0,84,1341	0/0:33,0:33:99:0,99,1582	0/0:24,0:24:72.20:0,72,1101	0/0:28,0:28:84.27:0,84,1320	0/0:23,0:23:69.24:0,69,1103	0/0:1,0:1:3.01:0,3,48
chr10	66018763	.	CG	C	785.83	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.120;DP=573;FS=6.628;HRun=3;HaplotypeScore=55.0764;InbreedingCoeff=0.9340;MQ=86.38;MQ0=0;MQRankSum=-3.272;QD=31.43;ReadPosRankSum=-2.954;VQSLOD=2.1086;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,138,1907	0/0:5,0:5:15.04:0,15,198	0/0:26,0:26:66.21:0,66,932	0/0:20,0:20:47.71:0,48,635	0/0:14,0:14:42.13:0,42,586	0/0:20,0:20:54.18:0,54,777	0/0:33,0:33:96.31:0,96,1361	1/1:1,24:25:72.22:881,72,0	0/0:15,0:15:39.12:0,39,544	0/0:18,0:18:54.18:0,54,763	0/0:6,0:6:18.06:0,18,258	0/0:17,0:17:42.14:0,42,600	0/0:25,0:25:75.24:0,75,1058	0/0:16,0:16:48.16:0,48,691	0/0:18,0:18:54.18:0,54,777	0/0:16,0:16:48.16:0,48,686	0/0:41,0:41:99:0,114,1584	0/0:14,0:14:39.13:0,39,556	0/0:26,0:26:75.23:0,75,1041	0/0:17,0:17:48.16:0,48,691	0/0:30,0:29:87.29:0,87,1240	0/0:6,0:6:12.03:0,12,155	0/0:13,0:13:39.11:0,39,537	0/0:30,0:30:90.30:0,90,1295	0/0:24,0:24:72.24:0,72,1037	0/0:25,0:25:72.24:0,72,1035	0/0:20,0:20:57.15:0,57,792	0/0:5,0:5:15.05:0,15,216
chr10	66019313	.	CTGTGTGTGTG	C	10379.12	PASS	AB=0.743;AC=36;AF=0.667;AN=54;BaseQRankSum=7.624;DP=824;FS=4.420;HRun=0;HaplotypeScore=271.1596;InbreedingCoeff=0.6896;MQ=53.16;MQ0=22;MQRankSum=-10.769;QD=19.62;ReadPosRankSum=1.250;VQSLOD=3.5483;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:33:45.13:0,45,1992	1/1:3,10:13:27.09:796,27,0	0/0:45,0:13:3.01:0,3,39	./.	0/0:18,0:20:18.06:0,18,710	1/1:14,14:27:30.10:898,30,0	1/1:15,9:24:22.01:491,22,0	1/1:30,0:30:9.14:54,9,0	1/1:16,0:34:40.69:855,41,0	0/0:26,0:28:20.08:0,20,291	0/0:14,0:19:11.85:0,12,102	1/1:20,22:42:63.22:1739,63,0	0/0:29,0:29:45.15:0,45,1944	1/1:12,17:31:33.03:887,33,0	1/1:20,22:44:60.12:1524,60,0	0/1:12,1:31:79.04:79,0,169	1/1:12,4:16:3.01:90,3,0	1/1:10,0:12:3.48:70,3,0	1/1:16,4:20:9.03:269,9,0	1/1:12,9:22:11.91:324,12,0	1/1:65,3:67:2.57:50,3,0	1/1:17,6:25:9.03:249,9,0	0/0:19,0:19:36.12:0,36,1621	0/0:43,0:47:92.53:0,93,3899	1/1:15,5:21:18.06:502,18,0	0/1:22,3:26:14.75:237,0,15	1/1:11,8:21:27.09:746,27,0	1/1:10,10:20:18.05:519,18,0
chr10	66020427	.	CTGTGTGTG	C	5184.50	PASS	AB=0.714;AC=31;AF=0.574;AN=54;BaseQRankSum=3.154;DP=627;FS=4.372;HRun=0;HaplotypeScore=172.2824;InbreedingCoeff=0.7167;MQ=63.56;MQ0=20;MQRankSum=-9.219;QD=18.06;ReadPosRankSum=1.885;VQSLOD=4.0674;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:44:54.18:0,54,1635	1/1:3,4:7:6.02:130,6,0	0/0:42,0:15:3:0,3,28	./.	0/0:22,0:21:36.12:0,36,1233	1/1:5,8:15:18.06:412,18,0	1/1:10,4:16:9.01:155,9,0	0/0:39,0:39:34:0,34,970	0/0:13,0:16:16.41:0,16,491	0/1:12,2:19:99:134,0,185	0/0:9,0:16:0.44:0,0,65	1/1:6,10:17:18.06:433,18,0	0/0:18,0:18:24.08:0,24,873	1/1:7,9:18:27.09:570,27,0	1/1:11,12:25:33.45:712,33,0	0/0:10,0:22:1.91:0,2,127	1/1:13,6:19:9.03:227,9,0	0/0:20,0:21:45.11:0,45,1238	1/1:19,4:22:12.04:302,12,0	1/1:10,6:20:24.99:416,25,0	1/1:21,3:24:2.74:53,3,0	1/1:10,13:23:9.03:226,9,0	0/0:20,0:20:36.12:0,36,1240	0/0:29,0:31:38.77:0,39,1344	1/1:8,9:17:18.06:417,18,0	1/1:13,10:22:33.10:773,33,0	1/1:11,5:16:6.02:151,6,0	1/1:2,1:3:3.01:76,3,0
chr10	66020808	.	AGGT	A	260.29	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.068;DP=678;FS=1.068;HRun=0;HaplotypeScore=100.0752;InbreedingCoeff=0.9360;MQ=81.49;MQ0=0;MQRankSum=-4.375;QD=16.27;ReadPosRankSum=0.448;VQSLOD=3.4415;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,157,3683	0/0:9,0:9:27.09:0,27,618	0/0:24,0:24:65.74:0,66,1233	0/0:22,0:22:16.24:0,16,895	0/0:19,0:19:57.16:0,57,1297	0/0:27,0:27:81.28:0,81,1890	0/0:29,0:29:87.30:0,87,2025	0/0:16,0:16:48.16:0,48,1060	1/1:3,8:11:27.06:310,27,0	0/0:29,0:29:84.28:0,84,1926	0/0:26,0:26:78.27:0,78,1835	0/0:28,0:28:81.26:0,81,1866	0/0:22,0:22:63.22:0,63,1454	0/0:24,0:24:72.24:0,72,1630	0/0:34,0:34:99:0,102,2269	0/0:27,1:28:46.33:0,46,1815	0/0:41,0:41:99:0,117,2674	1/1:2,3:5:6:62,6,0	0/0:24,0:24:69.18:0,69,1467	0/0:28,0:28:84.27:0,84,1932	0/0:26,0:26:78.27:0,78,1839	0/0:21,0:21:60.21:0,60,1341	0/0:20,0:20:60.21:0,60,1394	0/0:25,0:25:75.26:0,75,1773	0/0:21,0:21:60.21:0,60,1416	0/0:18,0:18:54.18:0,54,1232	0/0:29,0:29:87.27:0,87,2007	0/0:18,0:18:51.18:0,51,1162
chr10	66020815	.	CATCT	C	307.66	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.906;DP=691;FS=2.414;HRun=0;HaplotypeScore=115.2878;InbreedingCoeff=0.9393;MQ=75.95;MQ0=0;MQRankSum=-4.744;QD=27.97;ReadPosRankSum=0.936;VQSLOD=3.1927;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,166,4694	0/0:8,0:8:24.08:0,24,665	0/0:22,0:22:66.23:0,66,1777	0/0:18,0:18:21.45:0,21,867	0/0:22,0:22:66.23:0,66,1877	0/0:26,0:26:78.27:0,78,2249	0/0:30,0:30:90.31:0,90,2510	0/0:21,0:21:63.22:0,63,1750	1/1:0,8:8:24.08:347,24,0	0/0:31,0:31:93.32:0,93,2687	0/0:27,0:27:81.28:0,81,2305	0/0:26,0:26:78.25:0,78,2157	0/0:23,0:23:69.24:0,69,1939	0/0:24,0:24:72.25:0,72,2046	0/0:32,0:32:96.30:0,96,2656	0/0:28,1:29:44.33:0,44,2312	0/0:39,0:39:99:0,114,3114	1/1:0,3:3:6.01:72,6,0	0/0:26,0:26:75.26:0,75,2131	0/0:29,0:29:81.28:0,81,2332	0/0:30,0:30:87.30:0,87,2384	0/0:22,0:22:66.23:0,66,1910	0/0:22,0:22:66.21:0,66,1794	0/0:27,0:27:81.28:0,81,2287	0/0:25,0:25:69.24:0,69,1962	0/0:17,0:17:51.17:0,51,1378	0/0:32,0:32:96.33:0,96,2775	0/0:17,0:17:48.01:0,48,1001
chr10	66020951	.	T	TCTAGCCTA	1348.50	PASS	AB=0.632;AC=3;AF=0.054;AN=56;BaseQRankSum=-2.488;DP=683;FS=0.000;HRun=0;HaplotypeScore=196.2321;InbreedingCoeff=0.6388;MQ=72.27;MQ0=2;MQRankSum=-4.504;QD=58.63;ReadPosRankSum=2.178;VQSLOD=3.3379;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:56:99:0,123,2987	0/0:13,0:12:33.11:0,33,823	0/0:22,0:21:36.35:0,36,1115	0/0:20,0:18:34.72:0,35,1091	0/0:20,0:20:38.63:0,39,975	0/0:15,0:15:39.13:0,39,1004	0/0:26,0:26:66.23:0,66,1644	0/0:26,0:26:57.17:0,57,1362	0/1:5,7:12:60.30:678,0,60	0/0:28,0:28:63.22:0,63,1618	0/0:15,0:15:27.05:0,27,640	0/0:32,0:32:90.30:0,90,2343	0/0:26,0:25:66.20:0,66,1688	0/0:23,0:22:63.22:0,63,1663	0/0:24,0:24:54.15:0,54,1312	0/0:23,0:22:48.16:0,48,1251	0/0:30,0:30:84.27:0,84,2165	1/1:7,4:11:18.06:774,18,0	0/0:27,0:27:69.23:0,69,1687	0/0:25,0:25:57.11:0,57,1243	0/0:43,0:43:99:0,111,2912	0/0:24,0:24:48.15:0,48,1163	0/0:23,0:23:41.69:0,42,1120	0/0:37,0:36:96.33:0,96,2514	0/0:17,0:17:23.93:0,24,651	0/0:28,0:28:60.15:0,60,1468	0/0:25,0:25:63.20:0,63,1595	0/0:12,0:12:36.09:0,36,916
chr10	66021154	.	CAGTTACG	C	14571.73	PASS	AB=1.000;AC=35;AF=0.625;AN=56;BaseQRankSum=14.940;DP=502;FS=6.436;HRun=0;HaplotypeScore=133.4940;InbreedingCoeff=0.9106;MQ=71.32;MQ0=0;MQRankSum=-15.879;QD=48.57;ReadPosRankSum=4.520;VQSLOD=4.1948;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:51.17:0,51,1811	1/1:0,6:6:15.05:370,15,0	0/0:21,0:19:32.34:0,32,1295	0/0:16,0:15:33.11:0,33,1189	0/0:25,0:25:66.23:0,66,2487	1/1:3,23:26:51.18:1256,51,0	1/1:3,7:10:21.07:517,21,0	0/0:33,0:33:96.33:0,96,3404	1/1:0,13:13:39.13:885,39,0	0/0:17,0:17:48.16:0,48,1758	0/0:22,0:22:63.22:0,63,2394	1/1:4,19:23:45.15:1108,45,0	0/0:13,0:13:30.10:0,30,1156	1/1:2,10:12:24.08:591,24,0	1/1:2,14:16:33.11:775,33,0	0/1:16,0:16:25.81:26,0,1568	1/1:2,13:15:33.11:698,33,0	1/1:6,11:17:24.08:590,24,0	1/1:6,9:15:24.07:496,24,0	1/1:2,18:20:48.16:1107,48,0	1/1:1,8:9:18.06:405,18,0	1/1:0,24:24:54.13:1078,54,0	0/0:24,0:24:69.24:0,69,2470	0/0:12,0:12:30.10:0,30,1100	1/1:3,19:22:54.19:1330,54,0	1/1:0,18:18:54.19:1308,54,0	1/1:7,27:34:75.26:1810,75,0	1/1:0,4:4:9.03:222,9,0
chr10	66021783	.	C	CT	6476.98	PASS	AB=0.783;AC=29;AF=0.518;AN=56;BaseQRankSum=-12.816;DP=708;FS=14.028;HRun=11;HaplotypeScore=72.0009;InbreedingCoeff=0.8405;MQ=74.55;MQ0=0;MQRankSum=0.488;QD=18.14;ReadPosRankSum=0.809;VQSLOD=4.7031;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:92.57:0,93,715	1/1:5,5:10:14.78:122,15,0	0/0:26,0:17:0.53:0,1,97	0/0:19,0:16:0.69:0,1,50	0/0:23,0:27:67.89:0,68,488	1/1:5,24:30:36.88:555,37,0	1/1:3,23:26:30.87:495,31,0	0/0:31,0:31:65.68:0,66,509	0/0:20,0:23:54.82:0,55,404	0/0:41,0:42:85.57:0,86,649	0/0:18,0:18:35.83:0,36,278	1/1:3,14:17:33.07:335,33,0	0/0:27,1:28:47.25:0,47,547	1/1:4,25:30:62.96:623,63,0	1/1:5,27:32:19.66:563,20,0	0/0:19,0:21:21.52:0,22,329	1/1:4,31:35:26.61:786,27,0	0/0:25,0:25:46.22:0,46,413	0/1:13,5:17:45.67:128,0,46	1/1:8,25:33:28.53:612,29,0	1/1:6,18:24:39.08:396,39,0	1/1:4,14:18:12.83:301,13,0	0/0:30,0:32:73.67:0,74,559	0/0:22,0:22:56.75:0,57,441	1/1:2,7:9:9.02:91,9,0	1/1:6,17:23:10.64:471,11,0	1/1:5,27:32:60.04:594,60,0	1/1:3,14:19:38.07:404,38,0
chr10	66022438	.	CAA	C	5304.14	PASS	AB=0.835;AC=31;AF=0.554;AN=56;BaseQRankSum=-1.235;DP=527;FS=1.256;HRun=13;HaplotypeScore=73.4969;InbreedingCoeff=0.8114;MQ=51.07;MQ0=35;MQRankSum=1.174;QD=17.11;ReadPosRankSum=6.185;VQSLOD=3.9574;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:51.49:0,51,856	1/1:3,10:12:30:281,30,0	0/1:11,0:4:10.10:10,0,48	0/0:6,0:4:8.92:0,9,67	0/0:26,0:28:68.03:0,68,834	1/1:5,21:24:47.97:515,48,0	1/1:6,9:14:17.95:224,18,0	0/0:27,0:29:62:0,62,827	0/0:8,0:14:21.03:0,21,220	0/0:7,0:16:38.95:0,39,375	0/0:8,0:21:41.83:0,42,405	0/1:7,7:14:1.26:177,0,1	0/1:12,0:13:7.61:8,0,187	1/1:3,13:16:39.05:377,39,0	1/1:2,6:7:18.02:174,18,0	0/0:9,0:10:9.97:0,10,240	1/1:9,23:30:70.54:690,71,0	0/0:12,0:19:34.20:0,34,337	1/1:7,12:18:19.68:342,20,0	1/1:9,12:17:23.87:282,24,0	1/1:5,12:16:35.96:349,36,0	1/1:7,12:19:26.96:261,27,0	0/0:17,0:17:32.42:0,32,389	0/0:19,0:16:36:0,36,447	1/1:3,21:25:59.37:587,59,0	1/1:4,12:17:35.97:344,36,0	1/1:5,17:21:38.54:401,39,0	1/1:2,10:11:23.98:282,24,0
chr10	66023274	.	AG	A	268.33	PASS	AB=1.000;AC=3;AF=0.058;AN=52;BaseQRankSum=3.519;DP=447;FS=11.345;HRun=8;HaplotypeScore=53.3253;InbreedingCoeff=0.7594;MQ=78.44;MQ0=0;MQRankSum=1.168;QD=12.20;ReadPosRankSum=-2.614;VQSLOD=0.9629;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,1:33:72.22:0,72,867	0/0:7,0:7:18.04:0,18,207	0/0:14,0:13:15.73:0,16,200	0/0:19,0:19:33.30:0,33,415	0/0:11,0:11:24.07:0,24,290	0/0:24,0:24:63.19:0,63,761	0/0:27,0:28:81.10:0,81,944	1/1:4,13:17:38.62:361,39,0	0/0:3,0:3:0:0,0,0	0/1:5,0:5:0:0,0,0	./.	0/0:20,0:20:48.15:0,48,580	0/0:13,0:13:33.09:0,33,387	0/0:20,0:20:57.17:0,57,684	0/0:16,0:16:48.15:0,48,580	0/0:5,0:5:0.89:0,1,2	0/0:31,0:31:75.13:0,75,868	./.	0/0:10,0:10:27.97:0,28,328	0/0:9,0:9:18.03:0,18,203	0/0:54,0:54:99:0,135,1567	0/0:14,0:14:33.09:0,33,385	0/0:11,0:11:24.06:0,24,276	0/0:11,0:11:33.10:0,33,396	0/0:22,0:22:45.11:0,45,512	0/0:14,0:14:33.09:0,33,387	0/0:21,0:21:54.17:0,54,652	0/0:12,0:12:24.07:0,24,289
chr10	66023849	.	C	CTT	97.80	PASS	AB=0.812;AC=4;AF=0.071;AN=56;BaseQRankSum=5.199;DP=241;FS=50.050;HRun=0;HaplotypeScore=48.3186;InbreedingCoeff=0.1154;MQ=54.65;MQ0=1;MQRankSum=-2.510;QD=3.26;ReadPosRankSum=-1.908;VQSLOD=-0.0927;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:18,4:22:73.55:74,0,429	0/0:2,0:2:6.02:0,6,98	1/1:1,0:1:2.99:24,3,0	0/0:8,0:8:7.25:0,7,113	0/0:7,0:7:3.49:0,3,70	0/0:9,0:9:20.41:0,20,335	0/0:11,0:11:24.02:0,24,331	0/0:25,0:21:15.43:0,15,501	0/0:10,0:10:11.45:0,11,292	0/0:7,0:7:18.95:0,19,278	0/0:4,0:4:5.63:0,6,93	0/0:8,0:8:9:0,9,236	0/0:5,0:5:8.87:0,9,142	0/0:12,0:12:18.02:0,18,263	0/0:8,0:8:7.77:0,8,111	0/0:7,0:6:17.98:0,18,251	0/0:6,0:6:14.99:0,15,206	0/0:5,0:5:13.05:0,13,125	0/1:5,2:6:99:101,0,142	0/0:10,0:10:8.48:0,8,145	0/0:11,0:10:6.06:0,6,70	0/0:11,0:11:20.93:0,21,231	0/0:8,0:8:15.01:0,15,209	0/0:6,0:5:8.94:0,9,105	0/0:9,0:9:24.07:0,24,367	0/0:13,0:13:2.40:0,2,409	0/0:7,0:7:15.02:0,15,205	0/0:2,0:2:6.02:0,6,97
chr10	66023949	.	C	CCT	638.82	PASS	AB=0.875;AC=21;AF=0.404;AN=52;BaseQRankSum=7.684;DP=349;FS=17.026;HRun=0;HaplotypeScore=181.0663;InbreedingCoeff=-0.6152;MQ=33.82;MQ0=15;MQRankSum=-2.295;QD=2.17;ReadPosRankSum=2.218;VQSLOD=1.5703;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:32,3:35:47.24:47,0,683	0/1:3,1:4:6.29:20,0,6	./.	0/0:13,0:5:2.29:0,2,13	0/0:10,1:11:16.39:0,16,228	0/1:12,4:15:49.99:50,0,204	0/1:23,0:22:13.16:13,0,289	0/1:27,0:19:66.87:67,0,282	0/1:11,3:14:35.92:36,0,130	0/1:12,3:12:99:136,0,232	0/1:11,1:11:6.70:7,0,136	0/0:7,0:6:8.68:0,9,113	0/1:9,2:10:76.30:76,0,158	0/1:8,3:10:2.50:2,0,54	0/1:11,1:11:8.09:8,0,101	0/1:3,2:5:30.21:52,0,30	0/1:3,0:3:33.86:48,0,34	0/0:4,0:4:9.02:0,9,110	0/1:13,0:10:0.03:0,0,207	0/1:11,1:11:31.14:31,0,107	0/1:22,0:20:4.10:4,0,220	0/1:13,2:13:51.95:52,0,85	0/1:12,0:12:12.39:12,0,183	0/0:7,2:8:5.82:0,6,83	0/1:8,2:9:50.68:51,0,74	0/1:14,3:16:46.44:46,0,333	0/1:3,2:5:18.34:18,0,72	./.
chr10	66023954	.	TTC	T	62.61	PASS	AB=0.822;AC=8;AF=0.148;AN=54;BaseQRankSum=8.316;DP=381;FS=0.634;HRun=0;HaplotypeScore=191.3750;InbreedingCoeff=-0.0522;MQ=38.96;MQ0=16;MQRankSum=-3.835;QD=0.92;ReadPosRankSum=2.138;VQSLOD=2.7571;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,1:36:33.61:0,34,1157	1/1:3,1:4:8.66:63,9,0	0/0:15,0:3:3.01:0,3,56	0/0:16,0:6:5.30:0,5,59	0/0:10,1:11:2.04:0,2,333	0/0:15,2:16:10.59:0,11,466	0/0:24,0:23:50.69:0,51,795	0/0:31,0:23:14.84:0,15,569	0/0:11,3:14:0.68:0,1,273	0/1:15,1:13:49.13:49,0,357	0/0:12,1:12:12.65:0,13,278	0/0:6,1:6:16.08:0,16,221	0/1:9,2:10:21.49:21,0,197	0/1:10,3:12:15.77:16,0,133	0/0:13,0:12:8.49:0,8,226	0/1:3,2:5:21.10:21,0,50	0/0:5,0:4:5.71:0,6,111	0/0:4,0:4:4.86:0,5,73	0/0:13,0:10:25.85:0,26,343	0/0:11,2:12:0.60:0,1,371	0/0:22,0:20:11.80:0,12,413	0/0:13,2:13:4.62:0,5,164	0/0:13,0:13:21.55:0,22,297	0/0:11,1:11:10.20:0,10,208	0/1:11,2:12:5.65:6,0,305	0/0:17,1:17:3.57:0,4,506	0/1:4,2:6:12.61:13,0,139	./.
chr10	66023976	.	C	CT	684.69	PASS	AB=0.874;AC=18;AF=0.321;AN=56;BaseQRankSum=11.278;DP=546;FS=25.525;HRun=0;HaplotypeScore=308.0977;InbreedingCoeff=-0.4599;MQ=47.75;MQ0=16;MQRankSum=-5.289;QD=2.18;ReadPosRankSum=2.176;VQSLOD=1.6502;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:33,4:37:3.81:4,0,795	0/0:5,0:5:4.35:0,4,28	0/0:36,0:9:16.13:0,16,205	0/0:55,0:17:5.89:0,6,179	0/0:21,4:25:0.19:0,0,344	0/1:12,1:16:31.90:32,0,184	0/1:24,0:25:42.12:42,0,475	0/0:23,0:21:0.10:0,0,332	0/1:16,2:19:83.93:84,0,109	0/1:23,2:24:80.64:81,0,322	0/0:19,3:22:2.17:0,2,338	0/1:9,1:11:37.61:38,0,89	0/1:14,2:15:32.76:33,0,236	0/1:18,0:18:68.70:69,0,70	0/1:13,2:16:30.88:31,0,68	0/0:12,0:13:2.03:0,2,224	0/0:10,0:10:12.55:0,13,201	0/1:6,0:7:19.62:20,0,91	0/0:6,0:6:9.07:0,9,162	0/0:19,0:19:7.56:0,8,301	0/1:21,0:21:55.50:56,0,279	0/1:13,2:15:37.14:37,0,108	0/1:13,5:19:99:101,0,122	0/0:15,0:16:19.06:0,19,326	0/1:16,4:20:64.52:65,0,153	0/1:23,1:23:55.43:55,0,352	0/1:12,2:14:48.91:49,0,122	1/1:4,1:4:1.11:36,1,0
chr10	66023983	.	CCT	C	1794.58	PASS	AB=0.990;AC=24;AF=0.429;AN=56;BaseQRankSum=14.223;DP=580;FS=9.328;HRun=0;HaplotypeScore=327.4443;InbreedingCoeff=-0.4690;MQ=51.32;MQ0=10;MQRankSum=-8.544;QD=4.32;ReadPosRankSum=5.943;VQSLOD=0.9755;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:39,0:39:87.11:87,0,796	0/1:8,0:7:10.40:40,0,10	0/0:43,0:11:14.13:0,14,270	0/0:64,0:21:4.51:0,5,370	0/1:32,0:33:66.34:66,0,670	0/1:13,0:14:35.12:35,0,162	0/1:27,0:26:6.37:6,0,529	0/0:20,0:20:32.28:0,32,493	0/1:20,1:21:99:173,0,141	0/1:22,0:23:99:173,0,322	0/1:23,0:23:99:109,0,358	0/1:14,0:13:80.19:80,0,128	0/1:14,1:15:99:116,0,145	0/1:18,0:18:98.90:99,0,179	1/1:18,0:17:13.15:172,13,0	0/1:12,0:13:54.30:54,0,212	0/0:14,0:14:26.67:0,27,318	0/1:7,0:7:15.17:15,0,105	0/0:7,0:7:18.05:0,18,295	0/1:19,0:19:86.03:86,0,254	0/1:18,1:19:6.82:7,0,470	0/1:19,0:18:61.11:61,0,180	0/1:21,0:21:90.90:91,0,222	0/0:16,0:17:8.75:0,9,378	0/1:19,1:21:20.99:242,0,21	0/1:21,0:20:59.45:59,0,375	0/1:17,0:17:99:124,0,106	1/1:5,0:5:8.01:61,8,0
chr10	66023987	.	C	CT	1658.71	PASS	AB=0.971;AC=25;AF=0.446;AN=56;BaseQRankSum=13.143;DP=602;FS=24.503;HRun=0;HaplotypeScore=368.9182;InbreedingCoeff=-0.6846;MQ=53.23;MQ0=8;MQRankSum=-7.371;QD=3.53;ReadPosRankSum=6.958;VQSLOD=1.8953;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:32,3:35:99:181,0,644	0/1:8,0:8:16.64:53,0,17	0/0:45,0:16:1.30:0,1,255	0/0:61,0:21:35.74:0,36,416	0/1:34,2:36:99:142,0,566	0/1:13,0:13:48.75:49,0,204	0/1:28,1:28:48.69:49,0,382	0/1:19,0:18:2.83:3,0,333	0/1:20,1:21:95.59:157,0,96	0/1:28,0:28:99:133,0,316	0/1:23,1:24:97.88:98,0,287	0/1:15,0:14:19.59:20,0,142	0/1:16,0:17:90.16:90,0,139	0/1:17,1:18:99:154,0,146	0/1:16,0:15:29.44:29,0,38	0/1:14,1:15:95.44:95,0,163	0/1:12,1:13:24.82:25,0,288	0/1:7,0:7:15.94:16,0,73	0/0:7,0:7:18.06:0,18,250	0/1:22,1:23:44.03:44,0,246	0/0:19,0:19:3.93:0,4,325	0/1:21,0:21:36.17:36,0,175	0/1:21,1:22:92.56:93,0,147	0/1:18,2:20:23.10:23,0,289	0/1:24,0:24:40.69:126,0,41	0/1:20,0:19:66.34:66,0,357	0/1:20,0:20:70.42:70,0,148	1/1:5,0:5:12.96:60,13,0
chr10	66023989	.	CTT	C	3131.44	PASS	AB=0.974;AC=25;AF=0.446;AN=56;BaseQRankSum=11.346;DP=580;FS=2.707;HRun=2;HaplotypeScore=355.6408;InbreedingCoeff=-0.6863;MQ=52.98;MQ0=8;MQRankSum=-7.484;QD=6.93;ReadPosRankSum=3.741;VQSLOD=-0.0082;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:32,4:36:99:263,0,1047	0/1:8,0:8:69.64:83,0,70	0/0:40,1:15:28.78:0,29,400	0/0:62,0:21:42.69:0,43,511	0/1:35,0:35:99:213,0,788	0/1:12,0:12:81:81,0,335	0/1:24,0:24:99:142,0,508	0/0:14,0:13:29.66:0,30,432	0/1:22,0:22:99:270,0,177	0/1:27,0:27:99:190,0,527	0/1:22,0:22:99:214,0,332	0/1:14,1:14:51.80:52,0,193	0/1:15,0:15:99:132,0,132	0/1:18,1:19:99:304,0,258	0/1:15,1:15:63.11:63,0,79	0/1:16,0:16:99:163,0,224	0/1:11,1:12:44.46:44,0,389	0/1:6,1:7:33.78:34,0,112	0/0:7,0:7:13.35:0,13,304	0/1:20,0:20:99:167,0,340	0/1:17,0:17:7.83:8,0,441	0/1:19,2:21:83.47:83,0,268	0/1:21,1:22:99:127,0,234	0/1:21,0:21:48.46:48,0,567	0/1:21,0:21:46.45:246,0,46	0/1:20,0:19:95.97:96,0,526	0/1:19,0:19:99:139,0,336	1/1:4,1:5:2.75:127,3,0
chr10	66023993	.	T	TC	2144.80	PASS	AB=0.817;AC=21;AF=0.375;AN=56;BaseQRankSum=8.363;DP=600;FS=1.790;HRun=1;HaplotypeScore=392.6148;InbreedingCoeff=-0.6059;MQ=53.08;MQ0=7;MQRankSum=-6.457;QD=5.09;ReadPosRankSum=4.172;VQSLOD=0.1906;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:34,1:35:8.89:9,0,773	0/1:6,3:9:43.03:43,0,44	0/0:44,0:15:9.58:0,10,298	0/0:69,0:23:38.35:0,38,369	0/1:25,9:34:99:154,0,487	0/1:11,1:12:62.92:63,0,234	0/1:20,4:24:84.77:85,0,350	0/0:13,0:12:5.82:0,6,287	0/1:16,3:19:99:199,0,151	0/1:22,9:30:99:241,0,364	0/1:16,7:23:99:185,0,246	0/1:13,3:15:9.85:10,0,166	0/1:13,2:15:64.59:142,0,65	0/1:15,6:21:99:208,0,207	0/1:16,2:17:11.73:12,0,105	0/1:14,2:16:89.55:90,0,196	0/0:12,0:12:29.33:0,29,303	0/1:4,1:5:37.36:37,0,67	0/0:6,0:6:15.05:0,15,195	0/1:17,5:22:99:132,0,257	0/0:17,0:17:23.31:0,23,314	0/1:19,7:26:55.16:55,0,213	0/1:19,7:26:99:127,0,206	0/0:16,2:18:3.01:0,3,408	0/1:16,8:24:86.04:220,0,86	0/1:15,5:19:71.36:71,0,350	0/1:14,6:20:99:119,0,257	0/1:2,3:5:8.50:100,0,9
chr10	66024000	.	CTTT	C	6167.87	PASS	AB=0.785;AC=26;AF=0.464;AN=56;BaseQRankSum=13.785;DP=617;FS=5.282;HRun=3;HaplotypeScore=386.5088;InbreedingCoeff=-0.5750;MQ=51.88;MQ0=10;MQRankSum=-10.937;QD=13.07;ReadPosRankSum=6.267;VQSLOD=0.9520;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:32,5:37:99:185,0,1390	0/1:7,3:10:99:149,0,130	0/0:49,0:16:25.92:0,26,479	0/0:71,2:25:1.92:0,2,653	0/1:19,13:32:99:365,0,894	0/1:10,2:12:99:172,0,418	0/1:24,3:27:99:101,0,813	0/1:10,1:10:33.07:33,0,490	0/1:14,5:19:99:444,0,321	0/1:18,14:31:99:619,0,615	0/1:11,13:24:99:365,0,582	0/1:9,6:14:99:176,0,149	0/1:9,5:14:99:279,0,110	0/1:13,8:21:99:327,0,344	0/1:11,7:17:93.46:199,0,93	0/1:12,2:14:99:186,0,366	0/0:12,0:12:35.90:0,36,700	0/1:4,1:5:45.53:46,0,139	0/0:8,0:7:18.06:0,18,430	0/1:14,7:21:99:310,0,365	0/1:18,0:18:0.73:1,0,637	0/1:13,11:24:99:328,0,317	0/1:13,15:28:99:461,0,510	0/1:18,2:20:11.53:12,0,909	1/1:6,17:24:56.41:778,56,0	0/1:14,6:19:99:168,0,565	0/1:13,8:21:99:281,0,446	1/1:1,4:5:14.41:183,14,0
chr10	66024016	.	C	CTCT	5623.58	PASS	AB=0.860;AC=25;AF=0.446;AN=56;BaseQRankSum=10.631;DP=663;FS=37.386;HRun=0;HaplotypeScore=407.3769;InbreedingCoeff=-0.6572;MQ=47.96;MQ0=15;MQRankSum=-8.839;QD=10.22;ReadPosRankSum=2.467;VQSLOD=3.5194;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:36,5:41:99:234,0,1034	0/1:10,2:12:99:171,0,246	0/1:53,0:14:6.81:7,0,222	0/0:73,0:21:21.96:0,22,372	0/1:26,8:34:99:345,0,730	0/1:10,1:11:36.73:37,0,371	0/1:28,3:31:95.25:95,0,725	0/1:11,1:13:94.55:95,0,297	0/1:19,2:20:99:187,0,432	0/1:25,7:33:99:571,0,712	0/1:20,5:25:99:251,0,551	0/1:11,2:12:99:220,0,164	0/1:11,6:16:99:367,0,219	0/1:19,2:22:99:207,0,480	0/1:13,4:17:99:288,0,220	0/1:12,2:14:76.11:76,0,403	0/0:13,0:13:35.08:0,35,507	0/1:5,1:6:54.20:54,0,91	0/0:8,0:8:19.84:0,20,265	0/1:18,4:23:99:470,0,149	0/0:15,0:14:20.89:0,21,391	0/1:21,4:25:99:223,0,396	0/1:22,7:30:99:339,0,602	0/1:23,2:25:96.12:96,0,807	0/1:22,6:29:99:502,0,168	0/1:16,2:16:99:152,0,401	0/1:18,3:22:99:352,0,336	1/1:5,3:8:13.14:286,13,0
chr10	66024020	.	T	TC	3417.11	PASS	AB=0.867;AC=25;AF=0.446;AN=56;BaseQRankSum=12.997;DP=676;FS=93.172;HRun=1;HaplotypeScore=395.5660;InbreedingCoeff=-0.6851;MQ=45.91;MQ0=19;MQRankSum=-9.714;QD=6.16;ReadPosRankSum=3.228;VQSLOD=0.5588;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:35,5:40:99:104,0,748	0/1:11,2:13:99:132,0,162	0/1:55,0:11:1.61:2,0,186	0/0:69,0:19:9.79:0,10,275	0/1:27,8:35:99:252,0,525	0/1:10,1:11:11.48:11,0,275	0/1:31,3:34:61.35:61,0,658	0/1:14,1:13:38.89:39,0,250	0/1:19,3:21:99:146,0,305	0/1:27,8:34:99:304,0,552	0/1:22,5:27:56.93:57,0,460	0/1:10,3:12:99:164,0,124	0/1:11,7:17:99:299,0,186	0/1:20,2:22:65.20:65,0,361	0/1:12,7:18:99:250,0,130	0/1:13,2:15:43.28:43,0,308	0/1:13,0:13:8.45:8,0,350	0/1:6,0:6:29.07:44,0,29	0/0:9,1:8:17.87:0,18,220	0/1:19,6:25:99:305,0,170	0/0:15,0:14:27.01:0,27,350	0/1:22,5:26:99:133,0,284	0/1:25,7:32:99:195,0,422	0/0:24,2:26:5.94:0,6,633	0/1:20,7:27:99:324,0,217	0/1:15,2:16:89.18:89,0,289	0/1:21,4:24:99:257,0,221	1/1:5,3:8:0.77:131,1,0
chr10	66024028	.	CCCT	C	5623.18	PASS	AB=0.917;AC=36;AF=0.643;AN=56;BaseQRankSum=5.392;DP=684;FS=2.106;HRun=0;HaplotypeScore=387.4608;InbreedingCoeff=0.1412;MQ=50.13;MQ0=21;MQRankSum=-4.182;QD=11.81;ReadPosRankSum=4.532;VQSLOD=3.1323;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:42,0:42:14.08:14,0,1230	1/1:7,6:13:18.21:302,18,0	0/0:61,0:15:15.96:0,16,231	0/0:70,0:23:14.03:0,14,315	0/0:33,0:33:17.49:0,17,762	1/1:6,5:11:23.63:276,24,0	1/1:13,23:36:32.41:704,32,0	1/1:10,2:10:8.76:138,9,0	0/1:22,2:23:99:132,0,444	0/1:30,2:31:99:113,0,437	0/1:30,1:30:72.44:72,0,623	1/1:9,4:12:9.66:201,10,0	0/1:19,0:18:68.04:68,0,234	1/1:15,5:20:33.36:369,33,0	0/1:16,2:17:12.48:175,0,12	0/0:15,0:14:3.09:0,3,428	1/1:4,11:15:25.46:576,25,0	1/1:7,1:8:1.72:26,2,0	1/1:1,5:5:15.05:228,15,0	0/1:17,9:26:43.13:296,0,43	1/1:7,8:14:12.69:393,13,0	1/1:23,7:28:11.09:330,11,0	0/1:30,0:30:76.96:77,0,478	0/0:29,0:29:35.20:0,35,1306	0/1:21,5:27:14.38:352,0,14	0/1:14,3:15:99:139,0,101	1/1:12,12:23:16.30:551,16,0	1/1:7,0:7:14.14:89,14,0
chr10	66024029	.	CCT	C	541.68	PASS	AB=0.976;AC=17;AF=0.304;AN=56;BaseQRankSum=0.984;DP=682;FS=36.824;HRun=0;HaplotypeScore=391.0600;InbreedingCoeff=-0.2697;MQ=50.21;MQ0=22;MQRankSum=-2.727;QD=1.53;ReadPosRankSum=4.279;VQSLOD=0.8205;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:96.28:0,96,1510	0/1:13,0:13:38.50:38,0,72	0/1:62,0:16:2.58:3,0,304	0/0:68,0:23:19.73:0,20,362	0/0:33,0:33:26.16:0,26,1009	0/1:11,0:11:19.84:32,0,20	0/1:36,0:36:79.43:79,0,173	0/0:12,0:10:1.58:0,2,130	0/0:24,0:23:12.11:0,12,572	0/0:29,0:28:10.83:0,11,742	0/0:31,0:30:19.36:0,19,608	0/1:12,0:12:16.59:17,0,133	0/0:19,0:18:25.57:0,26,451	0/1:20,0:20:28.86:29,0,109	0/0:17,0:16:14.01:0,14,164	0/0:15,0:14:37.62:0,38,554	0/1:15,0:15:21.20:85,0,21	0/1:6,2:8:13.15:13,0,41	1/1:7,0:5:12.98:48,13,0	0/1:24,0:25:5.80:6,0,253	0/1:15,0:14:48.91:79,0,49	0/1:31,0:29:28.58:29,0,136	0/1:29,1:30:54.28:54,0,540	0/0:29,0:29:71.47:0,71,1259	0/1:26,1:27:99:102,0,142	0/1:17,0:15:15.07:15,0,270	0/1:24,0:23:72.20:72,0,127	0/0:7,0:7:15.02:0,15,99
chr10	66024056	.	TCA	T	394.31	PASS	AB=0.959;AC=15;AF=0.268;AN=56;BaseQRankSum=10.318;DP=574;FS=35.942;HRun=0;HaplotypeScore=257.9747;InbreedingCoeff=-0.1936;MQ=57.72;MQ0=15;MQRankSum=-6.824;QD=1.51;ReadPosRankSum=-0.695;VQSLOD=1.2155;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,1:37:51.39:0,51,744	0/0:9,0:8:15.51:0,16,177	0/0:44,1:21:41.11:0,41,543	0/0:42,1:18:20.76:0,21,223	0/1:15,2:17:24.80:25,0,146	0/0:17,0:16:13.53:0,14,390	0/1:35,0:35:26.03:26,0,692	0/1:8,1:7:29.10:29,0,117	0/0:23,0:21:25.64:0,26,575	0/1:16,1:16:51.88:52,0,224	0/1:17,0:17:22.82:23,0,175	0/0:11,0:10:15.82:0,16,231	0/1:13,1:14:21.23:21,0,270	0/1:11,0:11:5.93:6,0,197	0/0:17,0:16:26.84:0,27,330	0/0:12,0:11:13.42:0,13,231	0/0:19,0:18:46.21:0,46,479	0/1:13,0:13:15.46:15,0,161	0/0:13,0:12:30.05:0,30,305	0/1:25,0:26:8.64:9,0,294	0/0:18,0:18:47.77:0,48,513	0/1:25,0:23:52.17:52,0,239	0/1:18,0:18:63.74:64,0,152	0/0:27,0:27:59.76:0,60,704	0/1:28,2:30:99:155,0,386	0/0:20,0:19:44.21:0,44,416	0/1:23,2:25:30.27:30,0,338	1/1:4,0:4:8.24:46,8,0
chr10	66024521	.	G	GC	145.53	PASS	AB=0.613;AC=1;AF=0.018;AN=56;BaseQRankSum=4.646;DP=706;FS=4.419;HRun=2;HaplotypeScore=71.6722;InbreedingCoeff=-0.0135;MQ=85.91;MQ0=0;MQRankSum=-4.300;QD=7.66;ReadPosRankSum=1.033;VQSLOD=1.0816;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,120,1474	0/0:14,0:14:39.12:0,39,484	0/0:27,0:27:78.22:0,78,936	0/0:21,0:21:46.72:0,47,617	0/0:32,0:32:87.25:0,87,1053	0/0:20,0:20:54.16:0,54,657	0/0:24,0:24:66.21:0,66,818	0/0:36,0:36:99:0,105,1292	0/0:19,0:19:57.18:0,57,707	0/0:27,0:27:81.24:0,81,986	0/0:22,0:22:60.18:0,60,736	0/0:17,0:17:51.16:0,51,632	0/0:24,0:24:69.22:0,69,855	0/0:16,0:16:48.14:0,48,582	0/0:23,0:23:57.18:0,57,706	0/0:34,0:34:99:0,99,1227	0/0:32,0:32:96.25:0,96,1148	0/1:7,12:19:26.31:220,0,26	0/0:24,0:24:69.21:0,69,845	0/0:27,0:27:81.25:0,81,1004	0/0:23,0:23:69.22:0,69,856	0/0:30,0:30:87.26:0,87,1066	0/0:29,0:29:78.23:0,78,954	0/0:30,0:30:84.25:0,84,1028	0/0:27,0:27:78.22:0,78,942	0/0:23,0:23:63.20:0,63,781	0/0:35,0:35:99:0,105,1289	0/0:9,0:9:27.08:0,27,335
chr10	66024524	.	T	TGAAGCCC	935.84	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.583;DP=696;FS=6.171;HRun=0;HaplotypeScore=159.3586;InbreedingCoeff=0.9988;MQ=85.71;MQ0=0;MQRankSum=-5.181;QD=62.39;ReadPosRankSum=0.085;VQSLOD=3.1552;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,126,3026	0/0:14,0:14:42.12:0,42,1008	0/0:26,0:26:78.21:0,78,1776	0/0:21,0:21:58.35:0,58,1087	0/0:31,0:31:90.22:0,90,2042	0/0:18,0:18:54.14:0,54,1289	0/0:23,0:23:69.20:0,69,1662	0/0:37,0:37:99:0,102,2295	0/0:20,0:20:60.18:0,60,1492	0/0:26,0:26:72.19:0,72,1750	0/0:23,0:23:66.15:0,66,1439	0/0:18,0:18:51.16:0,51,1266	0/0:23,0:23:69.21:0,69,1715	0/0:16,0:16:45.12:0,45,1089	0/0:22,0:22:66.14:0,66,1389	0/0:33,0:33:96.27:0,96,2309	0/0:30,0:30:87.26:0,87,2178	1/1:6,9:15:35.99:1031,36,0	0/0:23,0:23:66.21:0,66,1665	0/0:30,0:30:87.25:0,87,2085	0/0:23,0:23:69.19:0,69,1680	0/0:29,0:29:84.27:0,84,2205	0/0:29,0:29:81.23:0,81,2011	0/0:28,0:28:81.26:0,81,2125	0/0:28,0:28:81.20:0,81,1849	0/0:22,0:22:63.22:0,63,1688	0/0:36,0:36:99:0,102,2600	0/0:9,0:9:27.05:0,27,560
chr10	66025492	.	TTAA	T	88.20	PASS	AB=0.762;AC=1;AF=0.018;AN=56;BaseQRankSum=3.439;DP=528;FS=0.000;HRun=0;HaplotypeScore=75.6923;InbreedingCoeff=-0.0216;MQ=84.82;MQ0=0;MQRankSum=1.664;QD=5.51;ReadPosRankSum=-1.793;VQSLOD=1.5472;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:96.28:0,96,2099	0/0:3,0:3:9.03:0,9,212	0/1:11,5:15:99:163,0,526	0/0:20,0:20:55.04:0,55,1041	0/0:15,0:15:39.09:0,39,865	0/0:18,0:18:54.14:0,54,1206	0/0:18,0:18:54.17:0,54,1209	0/0:24,0:24:66.22:0,66,1494	0/0:25,0:25:72.25:0,72,1701	0/0:22,0:22:66.23:0,66,1516	0/0:13,0:12:36.12:0,36,851	0/0:17,0:17:51.18:0,51,1205	0/0:25,0:25:75.26:0,75,1725	0/0:21,0:21:63.17:0,63,1417	0/0:17,0:17:51.18:0,51,1203	0/0:15,0:15:45.12:0,45,951	0/0:39,0:39:99:0,117,2762	0/0:29,0:29:84.29:0,84,1975	0/0:17,0:17:48.16:0,48,1075	0/0:17,0:17:51.16:0,51,1158	0/0:30,0:30:90.31:0,90,2125	0/0:8,0:8:21.07:0,21,495	0/0:10,0:10:27.08:0,27,593	0/0:20,0:20:60.19:0,60,1373	0/0:10,0:10:27.09:0,27,639	0/0:20,0:20:57.20:0,57,1332	0/0:23,0:21:63.22:0,63,1481	0/0:4,0:4:12.04:0,12,282
chr10	66027530	.	TC	T	10941.87	PASS	AB=0.519;AC=29;AF=0.518;AN=56;BaseQRankSum=9.031;DP=587;FS=4.705;HRun=1;HaplotypeScore=65.3681;InbreedingCoeff=0.9248;MQ=83.51;MQ0=0;MQRankSum=-2.244;QD=37.34;ReadPosRankSum=3.774;VQSLOD=5.4860;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,154,2434	1/1:0,3:3:9.03:126,9,0	0/0:23,0:22:64.43:0,64,950	0/0:27,0:26:69.23:0,69,1047	0/0:15,0:15:42.14:0,42,667	1/1:0,19:19:48.16:671,48,0	1/1:0,24:24:63.21:881,63,0	0/0:22,0:22:63.21:0,63,996	0/0:25,0:25:75.20:0,75,1135	0/0:20,0:20:60.19:0,60,915	0/0:9,0:9:27.09:0,27,426	1/1:0,19:19:51.17:713,51,0	0/0:18,0:18:54.18:0,54,859	1/1:0,24:24:69.23:965,69,0	1/1:0,14:14:39.13:545,39,0	0/0:17,0:17:51.17:0,51,808	1/1:0,26:26:72.24:1007,72,0	0/0:22,0:22:66.22:0,66,989	1/1:0,18:18:54.18:755,54,0	1/1:0,11:11:33.11:462,33,0	1/1:0,37:37:99:1427,102,0	1/1:0,16:16:36.12:496,36,0	0/0:13,0:13:39.13:0,39,618	0/0:29,0:29:84.24:0,84,1311	1/1:0,15:15:36.12:503,36,0	0/1:2,26:28:11.69:1007,0,12	1/1:0,18:18:42.14:587,42,0	1/1:0,21:21:57.19:797,57,0
chr10	66027972	.	CT	C	2124.30	PASS	AB=0.806;AC=19;AF=0.339;AN=56;BaseQRankSum=6.238;DP=503;FS=0.565;HRun=1;HaplotypeScore=124.9520;InbreedingCoeff=-0.5198;MQ=44.17;MQ0=89;MQRankSum=-8.294;QD=6.16;ReadPosRankSum=-1.131;VQSLOD=0.0402;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:32:90.31:0,90,1419	0/0:5,0:4:9.03:0,9,119	0/0:27,0:13:20.54:0,21,310	0/0:18,0:8:14.99:0,15,161	0/0:17,0:14:39.08:0,39,565	0/1:17,4:12:51.93:52,0,146	0/1:28,9:23:99:184,0,129	0/1:13,2:13:30.64:31,0,386	0/1:16,10:21:99:306,0,178	0/1:14,6:14:99:196,0,183	0/1:9,7:10:43.76:107,0,44	0/1:17,5:16:99:156,0,115	0/0:10,0:5:15.04:0,15,211	0/1:12,5:13:91.02:150,0,91	0/1:14,5:13:99:137,0,135	0/1:18,6:16:99:151,0,211	0/1:13,3:12:18.89:19,0,201	0/1:11,8:15:99:287,0,109	0/1:14,5:16:99:145,0,266	0/1:7,1:5:19.20:42,0,19	0/0:12,3:10:8.16:0,8,46	0/1:11,3:9:26.67:88,0,27	0/0:10,0:9:27.09:0,27,424	0/0:21,0:16:40.95:0,41,610	0/1:11,3:13:54.12:54,0,113	0/1:15,4:9:89.96:109,0,90	0/1:9,1:9:11.09:11,0,177	0/1:7,2:3:18.89:59,0,19
chr10	66027975	.	CT	C	2362.76	PASS	AB=0.990;AC=21;AF=0.375;AN=56;BaseQRankSum=6.200;DP=499;FS=0.543;HRun=1;HaplotypeScore=131.5845;InbreedingCoeff=-0.4589;MQ=48.22;MQ0=79;MQRankSum=-5.853;QD=6.73;ReadPosRankSum=0.058;VQSLOD=0.4706;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:33:93.32:0,93,1455	0/0:4,0:4:8.83:0,9,55	0/0:31,1:17:5.05:0,5,417	0/0:21,0:11:23.64:0,24,215	0/0:17,0:14:39.13:0,39,606	0/1:19,0:11:51.14:51,0,102	0/1:33,0:21:39.81:201,0,40	0/1:17,0:15:52.57:53,0,352	0/1:25,1:21:99:355,0,133	0/1:20,0:16:99:201,0,122	0/1:16,0:10:37.48:119,0,37	0/1:19,0:16:59.45:168,0,59	0/0:8,0:5:15.05:0,15,229	0/1:18,0:14:20.34:162,0,20	0/1:18,0:13:60.60:155,0,61	0/1:23,1:17:99:176,0,156	0/1:17,0:13:21.21:21,0,135	0/1:17,0:14:99:291,0,112	0/1:20,0:18:99:147,0,178	0/1:7,0:5:11.85:43,0,12	0/1:16,1:13:6.98:7,0,15	0/1:13,1:10:10.77:83,0,11	0/0:10,0:9:27.09:0,27,418	0/0:20,0:16:37.37:0,37,573	0/1:14,0:13:40.22:100,0,40	0/1:18,0:10:62.54:110,0,63	0/1:9,0:9:12.86:13,0,85	1/1:7,0:3:6.02:69,6,0
chr10	66027977	.	CCT	C	2417.65	PASS	AB=0.949;AC=31;AF=0.554;AN=56;BaseQRankSum=9.991;DP=494;FS=22.307;HRun=0;HaplotypeScore=141.8202;InbreedingCoeff=0.0523;MQ=50.61;MQ0=68;MQRankSum=-8.788;QD=6.66;ReadPosRankSum=4.791;VQSLOD=1.2968;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:35:99:0,99,1589	1/1:3,2:5:5.95:66,6,0	0/1:34,0:20:25.76:26,0,396	0/0:21,0:11:23.91:0,24,239	0/0:17,0:14:39.11:0,39,607	0/1:17,1:12:44.06:137,0,44	1/1:28,1:21:33.14:239,33,0	0/0:17,0:15:1.91:0,2,194	0/1:25,1:21:67.44:67,0,101	0/1:18,1:16:55.07:116,0,55	0/1:15,0:10:27.35:42,0,27	1/1:17,2:17:5.20:272,5,0	0/0:8,0:5:15.04:0,15,226	1/1:15,2:14:3.91:176,4,0	1/1:16,1:13:26.62:196,27,0	0/1:23,1:18:10.51:159,0,11	0/1:14,3:13:36.36:166,0,36	0/1:17,0:14:23.33:23,0,114	0/1:17,2:18:49.02:166,0,49	1/1:7,0:5:8.82:78,9,0	1/1:17,0:13:1.06:50,1,0	1/1:12,1:10:8.20:88,8,0	0/0:10,0:9:27.09:0,27,465	0/0:20,0:17:39.60:0,40,640	1/1:14,2:15:1.09:174,1,0	0/1:17,1:11:35.91:91,0,36	0/1:10,1:11:6.66:229,0,7	1/1:4,0:3:5.67:33,6,0
chr10	66027982	.	C	CCT	5522.46	PASS	AB=0.943;AC=37;AF=0.661;AN=56;BaseQRankSum=10.375;DP=471;FS=34.223;HRun=0;HaplotypeScore=146.9638;InbreedingCoeff=0.5559;MQ=57.26;MQ0=39;MQRankSum=-10.462;QD=17.04;ReadPosRankSum=5.561;VQSLOD=3.0637;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:37:99:0,105,1526	0/1:4,0:4:0.39:22,0,0	0/0:37,0:22:8.23:0,8,569	0/0:22,0:12:26.16:0,26,308	0/0:14,0:14:39.13:0,39,594	0/1:13,3:13:10.79:235,0,11	1/1:22,3:22:17.49:441,17,0	0/1:17,0:15:77.55:78,0,82	0/1:20,1:20:9.78:285,0,10	1/1:13,1:14:19.74:326,20,0	1/1:10,1:9:1.68:162,2,0	1/1:13,6:18:17.76:563,18,0	0/0:6,0:5:15.05:0,15,230	1/1:12,2:13:30.03:356,30,0	1/1:14,4:16:26.52:368,27,0	0/1:21,2:19:9.98:388,0,10	1/1:16,3:16:12.49:241,12,0	1/1:17,0:16:5.22:206,5,0	1/1:18,2:19:32.14:366,32,0	1/1:8,3:10:9.91:165,10,0	1/1:11,2:12:8.10:125,8,0	1/1:13,2:13:19.22:227,19,0	0/0:10,0:9:27.09:0,27,413	0/0:20,0:19:48.13:0,48,673	1/1:12,3:15:24.77:293,25,0	1/1:16,1:12:19.17:223,19,0	1/1:6,5:11:27.01:368,27,0	1/1:3,0:2:6.02:82,6,0
chr10	66027983	.	C	CCT	2793.35	PASS	AB=0.986;AC=36;AF=0.643;AN=56;BaseQRankSum=8.996;DP=468;FS=13.016;HRun=0;HaplotypeScore=153.9266;InbreedingCoeff=0.4300;MQ=58.95;MQ0=38;MQRankSum=-8.318;QD=8.78;ReadPosRankSum=1.874;VQSLOD=2.4869;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:38:99:0,105,1499	0/1:4,0:4:1.64:11,0,2	0/0:37,0:22:12.62:0,13,601	0/0:24,0:14:28.17:0,28,324	0/0:14,0:14:39.12:0,39,560	0/1:16,0:13:33.01:119,0,33	1/1:23,1:21:38.71:278,39,0	0/1:17,0:15:31.17:31,0,77	1/1:20,0:20:10.66:155,11,0	1/1:14,0:14:14.48:163,14,0	1/1:11,0:9:1.69:95,2,0	1/1:18,0:17:4.66:217,5,0	0/0:6,0:5:15.05:0,15,227	1/1:13,1:13:14.49:179,14,0	1/1:16,2:16:23.25:240,23,0	1/1:22,0:19:8.81:274,9,0	0/1:19,0:16:20.82:104,0,21	1/1:16,0:15:5.92:93,6,0	1/1:19,1:19:2.49:222,2,0	1/1:12,0:11:21.23:141,21,0	1/1:11,0:10:8.77:52,9,0	1/1:15,0:13:12.41:141,12,0	0/0:10,0:9:27.09:0,27,405	0/0:20,0:19:51.06:0,51,684	1/1:15,0:15:4.10:143,4,0	0/1:16,0:11:6.18:134,0,6	0/1:10,1:11:12.61:132,0,13	1/1:3,0:2:6.01:58,6,0
chr10	66027986	.	TC	T	6143.69	PASS	AB=0.696;AC=35;AF=0.625;AN=56;BaseQRankSum=9.083;DP=453;FS=10.943;HRun=6;HaplotypeScore=130.0837;InbreedingCoeff=0.5145;MQ=62.18;MQ0=23;MQRankSum=-8.545;QD=20.34;ReadPosRankSum=0.955;VQSLOD=3.3707;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,102,1454	0/1:2,1:3:17.81:28,0,18	0/0:38,0:24:28.65:0,29,644	0/0:21,0:14:27.55:0,28,340	0/0:13,0:13:39.13:0,39,556	0/1:9,7:14:2.83:300,0,3	1/1:5,16:21:32.81:399,33,0	0/1:11,5:15:1.86:181,0,2	1/1:7,13:19:28.07:442,28,0	1/1:4,10:14:24.47:353,24,0	1/1:3,7:10:27.06:305,27,0	1/1:8,9:17:31.22:364,31,0	0/0:6,0:5:15.05:0,15,216	1/1:5,9:13:9.08:313,9,0	1/1:10,7:15:12.27:337,12,0	1/1:9,12:19:26.90:460,27,0	0/1:13,8:19:3.85:379,0,4	1/1:3,11:14:39.11:450,39,0	0/1:6,12:17:9.31:369,0,9	1/1:5,6:11:30.02:308,30,0	0/1:5,6:11:17.24:40,0,17	1/1:5,6:12:23.75:216,24,0	0/0:11,0:11:30.10:0,30,431	0/0:25,0:24:54.14:0,54,733	1/1:6,8:14:7.21:292,7,0	0/1:9,7:11:4.75:270,0,5	1/1:9,4:13:8.83:266,9,0	1/1:1,2:2:6.02:72,6,0
chr10	66027987	.	C	CCT	9428.04	PASS	AB=0.917;AC=35;AF=0.625;AN=56;BaseQRankSum=7.246;DP=458;FS=12.158;HRun=0;HaplotypeScore=129.4285;InbreedingCoeff=0.5450;MQ=63.47;MQ0=21;MQRankSum=-10.080;QD=31.01;ReadPosRankSum=0.741;VQSLOD=6.5789;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,102,1557	0/1:3,0:3:17.73:46,0,18	0/0:37,0:25:41.02:0,41,718	0/0:22,0:15:28.93:0,29,374	0/0:14,0:14:39.13:0,39,592	0/1:13,3:14:2.51:488,0,3	1/1:17,3:21:33.39:698,33,0	0/1:15,0:14:0.05:220,0,0	1/1:18,2:19:28.79:624,29,0	1/1:13,1:14:24.52:460,25,0	1/1:8,2:10:27.09:391,27,0	1/1:11,6:17:33.70:647,34,0	0/0:6,0:5:15.05:0,15,230	1/1:12,2:13:22.46:488,22,0	1/1:11,7:16:12.46:545,12,0	1/1:16,4:19:27.59:667,28,0	0/1:19,3:20:3.53:564,0,4	1/1:14,0:14:39.13:606,39,0	0/1:16,2:17:8.97:560,0,9	1/1:8,3:11:30.10:508,30,0	0/1:10,2:12:6.07:105,0,6	1/1:8,4:12:24.08:386,24,0	0/0:11,0:11:30.10:0,30,454	0/0:27,0:26:53.65:0,54,795	1/1:11,3:14:7.36:427,7,0	0/1:15,1:11:3.49:405,0,3	1/1:8,5:13:7.35:490,7,0	1/1:3,0:2:6.02:102,6,0
chr10	66028761	.	G	GCCTGGC	2419.53	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-5.935;DP=555;FS=0.000;HRun=0;HaplotypeScore=117.9356;InbreedingCoeff=0.9405;MQ=74.71;MQ0=0;MQRankSum=-8.138;QD=59.01;ReadPosRankSum=-0.041;VQSLOD=3.8571;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:63.22:0,63,1327	0/0:7,0:7:18.06:0,18,381	0/0:15,0:16:15.51:0,16,317	0/0:19,0:19:24.08:0,24,406	0/0:8,0:8:15.05:0,15,320	0/0:21,0:21:48.16:0,48,983	0/0:27,0:27:60.17:0,60,1197	0/0:31,0:31:57.19:0,57,1187	0/0:17,0:17:39.13:0,39,807	1/1:8,13:21:42.14:1361,42,0	1/1:3,2:5:6.02:199,6,0	0/0:24,0:24:63.22:0,63,1325	0/0:26,0:26:51.17:0,51,1068	0/0:30,0:30:69.20:0,69,1363	0/0:16,0:16:42.13:0,42,825	1/1:4,10:15:30.10:994,30,0	0/0:18,0:18:42.14:0,42,879	0/0:35,0:35:75.26:0,75,1598	0/0:15,0:15:16.59:0,17,534	0/0:9,0:9:24.08:0,24,505	0/0:54,0:54:99:0,107,2254	0/0:13,0:13:39.13:0,39,831	0/0:11,0:11:30.10:0,30,620	0/0:29,0:29:72.19:0,72,1430	0/0:11,0:11:21.07:0,21,427	0/0:19,0:19:42.13:0,42,840	0/0:18,0:18:48.13:0,48,980	0/0:9,0:9:27.09:0,27,575
chr10	66029259	.	GA	G	7250.62	PASS	AB=0.560;AC=41;AF=0.732;AN=56;BaseQRankSum=5.429;DP=582;FS=12.287;HRun=11;HaplotypeScore=68.5017;InbreedingCoeff=0.8432;MQ=81.43;MQ0=1;MQRankSum=-1.202;QD=17.60;ReadPosRankSum=5.313;VQSLOD=4.8844;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:43:99:0,102,993	1/1:0,12:12:32.96:271,33,0	0/0:32,0:30:27.90:0,28,462	0/0:21,0:17:18.97:0,19,220	0/0:24,0:24:60.15:0,60,639	1/1:4,9:13:20.96:172,21,0	1/1:2,13:15:0.98:214,1,0	1/1:6,20:26:59.90:489,60,0	1/1:1,19:20:47.84:394,48,0	1/1:6,18:24:50.75:408,51,0	1/1:1,15:16:41.84:336,42,0	1/1:4,11:17:37.02:283,37,0	0/0:13,0:13:30.05:0,30,305	0/1:3,11:14:4.70:170,0,5	1/1:2,17:19:35.94:296,36,0	1/1:0,13:13:35.74:295,36,0	1/1:4,33:37:54.91:658,55,0	1/1:2,12:14:32.96:271,33,0	1/1:4,10:15:34.90:265,35,0	1/1:4,18:22:47.84:388,48,0	1/1:5,22:27:44.92:369,45,0	1/1:2,16:18:27.29:346,27,0	0/0:27,0:27:66.08:0,66,688	0/0:9,1:10:2.42:0,2,221	1/1:4,20:24:15.95:336,16,0	1/1:5,28:33:60.41:660,60,0	1/1:2,25:27:42.91:556,43,0	1/1:1,5:6:8.99:74,9,0
chr10	66029483	.	TC	T	732.23	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.157;DP=698;FS=0.000;HRun=4;HaplotypeScore=64.9094;InbreedingCoeff=0.9844;MQ=91.57;MQ0=0;MQRankSum=-2.558;QD=30.51;ReadPosRankSum=2.527;VQSLOD=3.8999;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,153,2123	0/0:17,0:17:51.17:0,51,713	0/0:36,0:36:99:0,102,1365	0/0:23,0:23:63.13:0,63,823	0/0:20,0:20:57.10:0,57,772	0/0:18,0:18:51.17:0,51,714	0/0:30,0:30:84.28:0,84,1172	0/0:26,0:26:66.22:0,66,924	0/0:30,0:30:87.29:0,87,1218	0/0:27,0:27:78.25:0,78,1069	0/0:14,0:14:39.12:0,39,529	0/0:19,0:19:57.18:0,57,779	0/0:31,0:31:90.30:0,90,1260	0/0:27,0:27:78.26:0,78,1092	0/0:25,0:25:72.24:0,72,1005	0/0:24,0:23:72.23:0,72,992	0/0:31,0:31:93.31:0,93,1298	1/1:0,24:24:69.21:827,69,0	0/0:28,0:28:78.21:0,78,1038	0/0:20,0:20:54.17:0,54,738	0/0:26,0:26:78.24:0,78,1074	0/0:24,0:24:69.22:0,69,946	0/0:16,0:16:45.14:0,45,613	0/0:30,0:30:90.29:0,90,1241	0/0:25,0:24:72.23:0,72,991	0/0:26,0:26:72.19:0,72,969	0/0:24,0:24:72.24:0,72,1008	0/0:5,0:5:15.05:0,15,210
chr10	66030601	.	AT	A	621.32	PASS	AB=0.933;AC=3;AF=0.054;AN=56;BaseQRankSum=5.242;DP=497;FS=1.741;HRun=1;HaplotypeScore=56.6554;InbreedingCoeff=0.5965;MQ=67.80;MQ0=0;MQRankSum=0.331;QD=17.75;ReadPosRankSum=0.860;VQSLOD=3.9223;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,120,1607	0/0:4,0:4:8.98:0,9,102	0/1:13,1:12:20.49:20,0,251	0/0:14,0:12:9:0,9,277	0/0:21,0:21:57.02:0,57,739	0/0:16,0:16:45.05:0,45,567	0/0:17,0:17:45.08:0,45,552	0/0:22,0:22:39.90:0,40,759	0/0:11,0:11:27.02:0,27,340	0/0:19,0:19:57.19:0,57,788	0/0:18,0:18:54.04:0,54,691	0/0:9,0:9:21.07:0,21,293	0/0:14,0:14:42.10:0,42,543	0/0:12,0:12:36.11:0,36,484	0/0:14,0:14:36.08:0,36,447	0/0:17,0:17:51.07:0,51,652	0/0:24,0:24:64.60:0,65,882	1/1:0,21:21:51.17:706,51,0	0/0:27,0:27:78.05:0,78,972	0/0:23,0:23:59.98:0,60,745	0/0:11,0:11:33.09:0,33,442	0/0:13,0:13:35.88:0,36,407	0/0:14,0:14:38.91:0,39,462	0/0:17,0:17:51.15:0,51,694	0/0:19,0:19:57.17:0,57,772	0/0:27,0:27:81.21:0,81,1090	0/0:25,0:25:66.18:0,66,882	0/0:12,0:12:35.98:0,36,452
chr10	66030931	.	T	TG	13856.07	PASS	AB=0.670;AC=53;AF=0.946;AN=56;BaseQRankSum=1.243;DP=434;FS=27.629;HRun=1;HaplotypeScore=348.1209;InbreedingCoeff=-0.0445;MQ=46.48;MQ0=0;MQRankSum=-0.250;QD=31.93;ReadPosRankSum=8.520;VQSLOD=-0.1446;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,20:22:37.03:568,37,0	1/1:0,6:6:18.06:248,18,0	1/1:5,4:8:15.52:202,16,0	0/1:6,1:6:15.85:113,0,16	1/1:5,20:25:38.79:483,39,0	1/1:0,23:23:60.96:854,61,0	1/1:0,15:15:24.54:408,25,0	1/1:1,18:19:54.14:725,54,0	1/1:1,15:17:47.02:641,47,0	1/1:4,21:25:66.22:896,66,0	1/1:2,14:16:26.44:326,26,0	1/1:1,18:19:54.18:745,54,0	1/1:1,15:16:43.40:617,43,0	1/1:1,11:12:31.36:455,31,0	1/1:0,15:15:40.37:580,40,0	1/1:0,16:16:48.16:662,48,0	1/1:3,6:9:12.83:200,13,0	1/1:0,3:3:9.03:123,9,0	1/1:1,8:8:24.08:330,24,0	1/1:4,10:14:34.73:348,35,0	0/1:4,9:13:1.31:70,0,1	1/1:2,13:15:33.20:454,33,0	1/1:4,18:22:55.26:681,55,0	0/1:1,5:6:2.30:34,0,2	1/1:2,17:19:57.09:729,57,0	1/1:4,21:25:69.19:932,69,0	1/1:1,21:21:61.35:853,61,0	1/1:0,14:14:42.14:578,42,0
chr10	66030933	.	C	CA	14270.06	PASS	AB=0.889;AC=54;AF=0.964;AN=56;BaseQRankSum=-3.312;DP=428;FS=2.230;HRun=1;HaplotypeScore=361.0190;InbreedingCoeff=-0.0353;MQ=46.90;MQ0=0;MQRankSum=-1.951;QD=33.34;ReadPosRankSum=4.296;VQSLOD=3.2780;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:20:42.14:594,42,0	1/1:7,0:7:18.06:254,18,0	1/1:6,3:8:15.05:212,15,0	0/1:5,2:6:19.64:116,0,20	1/1:23,0:23:35.64:465,36,0	1/1:26,0:26:66.19:894,66,0	1/1:15,0:15:30.10:417,30,0	1/1:20,0:20:54.61:738,55,0	1/1:19,0:18:51.12:661,51,0	1/1:27,0:27:72.24:1000,72,0	1/1:15,0:15:32.32:377,32,0	1/1:19,0:19:53.08:758,53,0	1/1:15,0:15:45.15:633,45,0	1/1:14,0:14:36.09:485,36,0	1/1:16,0:16:42.14:586,42,0	1/1:19,0:19:53.02:716,53,0	1/1:7,0:7:15.05:213,15,0	1/1:3,0:3:9.03:128,9,0	1/1:8,0:8:24.08:339,24,0	1/1:11,0:11:26.92:290,27,0	1/1:9,0:9:6.02:85,6,0	1/1:13,0:13:33.11:469,33,0	1/1:20,0:20:54.05:693,54,0	0/1:7,0:7:0.51:37,0,1	1/1:17,0:17:51.13:694,51,0	1/1:24,0:24:72.15:965,72,0	1/1:24,0:23:63.19:854,63,0	1/1:14,0:14:42.14:594,42,0
chr10	66030989	.	AC	A	13844.32	PASS	AC=50;AF=1.000;AN=50;DP=441;FS=0.000;HRun=2;HaplotypeScore=455.9767;InbreedingCoeff=-0.0024;MQ=31.33;MQ0=0;QD=31.54;VQSLOD=1.7630;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,12:12:21.07:272,21,0	1/1:1,8:9:18.06:233,18,0	./.	./.	1/1:3,25:28:54.18:699,54,0	1/1:2,18:20:42.14:544,42,0	1/1:1,15:16:43.02:547,43,0	1/1:2,14:16:42.14:545,42,0	1/1:0,21:20:54.18:700,54,0	1/1:0,25:25:72.23:934,72,0	1/1:0,17:17:30.10:389,30,0	1/1:2,14:16:27.09:350,27,0	1/1:0,18:17:36.12:466,36,0	1/1:0,18:18:48.16:622,48,0	1/1:1,15:16:42.14:544,42,0	1/1:0,18:18:54.18:700,54,0	1/1:0,7:7:18.06:233,18,0	1/1:0,6:6:18.06:233,18,0	1/1:1,8:9:24.08:311,24,0	1/1:0,23:23:60.20:778,60,0	./.	1/1:2,21:23:48.16:622,48,0	1/1:0,24:24:66.21:855,66,0	1/1:1,6:7:12.04:155,12,0	1/1:1,23:24:57.19:739,57,0	1/1:3,23:26:69.22:895,69,0	1/1:0,26:26:75.24:972,75,0	1/1:1,13:14:39.13:506,39,0
chr10	66031013	.	C	CAA	17135.25	PASS	AB=1.000;AC=53;AF=0.946;AN=56;BaseQRankSum=2.619;DP=447;FS=0.000;HRun=6;HaplotypeScore=375.2460;InbreedingCoeff=0.3504;MQ=38.09;MQ0=0;MQRankSum=-3.427;QD=38.51;ReadPosRankSum=2.475;VQSLOD=0.2017;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,10:16:33.11:533,33,0	1/1:1,4:5:12.04:199,12,0	0/0:2,0:2:3.01:0,3,38	0/1:6,0:6:34.78:35,0,54	1/1:3,24:28:75.25:1194,75,0	1/1:5,13:18:45.04:721,45,0	1/1:1,15:16:45.15:757,45,0	1/1:7,11:18:42.03:671,42,0	1/1:5,15:19:42.14:741,42,0	1/1:10,20:30:69.17:1106,69,0	1/1:7,15:22:47.99:758,48,0	1/1:1,11:12:36.08:589,36,0	1/1:2,10:11:27.09:485,27,0	1/1:4,13:17:39.13:653,39,0	1/1:9,9:18:36.08:563,36,0	1/1:9,11:20:39.05:593,39,0	1/1:3,5:8:15.05:257,15,0	1/1:2,7:9:21.07:353,21,0	1/1:6,3:9:9.03:160,9,0	1/1:3,22:26:69.22:1189,69,0	1/1:2,1:3:3.01:41,3,0	1/1:2,14:16:42.14:746,42,0	1/1:7,17:24:57.14:926,57,0	1/1:1,2:3:6.02:95,6,0	1/1:3,20:23:63.11:1093,63,0	1/1:6,19:25:63.21:1063,63,0	1/1:9,21:31:78.24:1243,78,0	1/1:3,7:10:21.07:373,21,0
chr10	66031020	.	CT	C	5864.22	PASS	AB=0.819;AC=54;AF=0.964;AN=56;BaseQRankSum=3.921;DP=400;FS=1.846;HRun=2;HaplotypeScore=346.4235;InbreedingCoeff=0.1438;MQ=45.06;MQ0=0;MQRankSum=-4.516;QD=14.66;ReadPosRankSum=2.448;VQSLOD=3.8869;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,14:14:36.94:194,37,0	1/1:0,4:4:11.44:61,11,0	0/1:2,1:3:1.44:20,0,1	0/1:7,1:8:6.20:6,0,25	1/1:2,25:27:63.11:289,63,0	1/1:0,18:18:45.61:240,46,0	1/1:1,15:16:46.12:269,46,0	1/1:0,17:17:47.40:317,47,0	1/1:0,16:15:42.78:222,43,0	1/1:0,27:27:76.75:519,77,0	1/1:0,20:20:55.10:266,55,0	1/1:0,13:13:36.57:192,37,0	1/1:0,11:10:28.22:136,28,0	1/1:0,15:15:42.82:234,43,0	1/1:0,14:14:39.18:198,39,0	1/1:0,13:13:37.09:202,37,0	1/1:0,8:8:19.72:94,20,0	1/1:0,8:8:23.32:148,23,0	1/1:0,6:6:14.53:85,15,0	1/1:1,22:23:64.20:314,64,0	1/1:0,3:3:8.49:49,8,0	1/1:0,15:15:40.58:195,41,0	1/1:0,20:20:55.50:277,56,0	1/1:0,2:2:5.90:41,6,0	1/1:0,22:22:62.63:326,63,0	1/1:0,22:22:64.80:415,65,0	1/1:1,26:27:75.88:425,76,0	1/1:0,8:8:23.29:132,23,0
chr10	66031984	.	C	CTG	2710.02	PASS	AB=0.586;AC=5;AF=0.089;AN=56;BaseQRankSum=-5.413;DP=989;FS=27.671;HRun=0;HaplotypeScore=220.5322;InbreedingCoeff=0.7146;MQ=58.08;MQ0=7;MQRankSum=-0.428;QD=25.09;ReadPosRankSum=-1.190;VQSLOD=2.4170;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:53:99:0,111,1203	0/0:16,0:16:39.12:0,39,468	0/0:47,0:23:15:0,15,150	0/0:48,0:26:27.91:0,28,258	0/0:24,0:25:47.98:0,48,553	0/0:18,0:20:35.76:0,36,376	0/0:24,0:24:48.11:0,48,550	0/0:34,3:39:3.93:0,4,566	0/0:43,0:45:75:0,75,797	1/1:16,37:52:42.49:1593,42,0	1/1:4,17:21:33.11:528,33,0	0/0:26,0:26:19.20:0,19,436	0/0:38,0:38:83.78:0,84,948	0/0:35,0:36:49.80:0,50,499	0/0:35,0:35:56.19:0,56,652	0/1:10,24:34:38.27:719,0,38	0/0:34,0:43:81.67:0,82,832	0/0:12,0:20:12.21:0,12,136	0/0:32,0:33:44.31:0,44,457	0/0:26,0:28:53.89:0,54,624	0/0:67,0:72:99:0,120,1490	0/0:34,0:36:77.88:0,78,877	0/0:16,0:18:35.77:0,36,387	0/0:35,0:41:75.17:0,75,840	0/0:29,0:32:56.64:0,57,746	0/0:50,1:53:78.84:0,79,1332	0/0:31,0:31:68.19:0,68,754	0/0:21,0:22:50.99:0,51,589
chr10	66032099	.	G	GCA	148.49	PASS	AB=0.997;AC=11;AF=0.196;AN=56;BaseQRankSum=7.804;DP=548;FS=0.000;HRun=0;HaplotypeScore=161.5267;InbreedingCoeff=-0.1313;MQ=38.14;MQ0=1;MQRankSum=4.680;QD=0.74;ReadPosRankSum=-0.993;VQSLOD=2.4117;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:18,0:18:41.54:42,0,125	0/0:12,0:12:8.75:0,9,83	0/0:3,0:2:3.01:0,3,46	0/0:5,0:3:5.12:0,5,20	0/0:19,0:19:7.13:0,7,97	0/1:14,0:12:28.83:29,0,29	0/0:19,1:20:2.49:0,2,106	0/0:29,0:29:40.31:0,40,954	0/1:21,0:21:1.26:1,0,39	0/0:40,0:40:41.60:0,42,1556	0/0:20,0:20:6.02:0,6,92	0/1:28,0:26:5.48:5,0,84	0/0:32,1:33:9.50:0,9,140	0/1:30,1:31:20.18:20,0,41	0/0:33,1:34:1.53:0,2,23	0/0:26,0:26:6.02:0,6,89	0/0:7,0:7:3.01:0,3,47	1/1:1,3:4:9:120,9,0	0/0:14,0:14:36.11:0,36,538	0/1:20,0:20:10.41:10,0,133	0/1:20,0:20:8.73:9,0,104	0/0:25,0:25:8.58:0,9,115	0/1:18,0:18:17.21:17,0,39	0/0:10,0:9:5.98:0,6,67	0/0:20,0:20:5.44:0,5,66	0/0:26,0:26:39.44:0,39,904	0/1:26,0:26:27.89:28,0,208	0/0:4,0:4:2.68:0,3,11
chr10	66032178	.	GTT	G	3517.66	PASS	AB=0.772;AC=10;AF=0.179;AN=56;BaseQRankSum=9.030;DP=1255;FS=25.155;HRun=4;HaplotypeScore=566.5806;InbreedingCoeff=-0.2263;MQ=41.66;MQ0=0;MQRankSum=-10.659;QD=7.96;ReadPosRankSum=5.045;VQSLOD=0.0857;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,5:32:68:0,68,802	0/0:22,16:38:31.68:0,32,928	0/0:35,0:30:72.69:0,73,1190	0/0:32,0:25:48.04:0,48,865	0/0:24,18:42:63.23:0,63,665	0/0:23,2:24:2.63:0,3,898	0/0:29,9:38:83.20:0,83,913	0/1:46,9:55:99:350,0,1545	0/1:28,26:54:20.57:21,0,1132	0/1:44,34:78:99:1326,0,1808	0/0:20,11:31:54.54:0,55,593	0/0:55,16:69:70.69:0,71,1922	0/1:36,23:59:99:115,0,1186	0/0:45,17:62:77.47:0,77,1581	0/0:52,21:73:46.54:0,47,1975	0/0:40,21:61:73.44:0,73,1492	0/1:24,2:26:19.84:20,0,883	0/1:13,4:16:98.45:98,0,278	0/1:26,3:28:75.37:75,0,953	0/0:19,15:34:60.96:0,61,794	0/0:59,7:66:93.13:0,93,1485	0/0:33,21:54:99:0,105,1151	0/0:29,18:47:81.73:0,82,945	0/0:24,7:30:54.28:0,54,487	0/0:25,14:39:68.88:0,69,960	0/1:36,25:61:99:1025,0,1341	0/1:21,21:42:99:458,0,588	0/1:14,7:21:29.04:29,0,654
chr10	66032237	.	A	ATG	6863.66	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=19.288;DP=1591;FS=30.973;HRun=0;HaplotypeScore=555.5545;InbreedingCoeff=-0.4690;MQ=47.26;MQ0=4;MQRankSum=-19.151;QD=6.16;ReadPosRankSum=3.394;VQSLOD=2.2154;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:61,0:61:78.51:0,79,1158	0/1:30,0:30:99:252,0,670	0/0:54,0:36:78.14:0,78,985	0/0:53,0:37:67.39:0,67,773	0/0:39,0:39:1.15:0,1,828	0/1:35,0:34:99:232,0,721	0/0:42,0:42:42.51:0,43,958	0/1:67,0:67:99:177,0,1130	0/1:67,0:67:99:247,0,1312	0/1:99,0:99:99:946,0,1761	0/1:45,0:45:99:153,0,934	0/1:68,0:68:99:482,0,977	0/1:66,0:66:99:444,0,934	0/1:72,0:72:99:463,0,1040	0/1:80,0:80:99:189,0,1448	0/1:79,0:79:99:431,0,1412	0/0:47,0:47:67.28:0,67,1385	1/1:7,27:33:34.76:1069,35,0	0/1:35,0:33:99:106,0,689	0/1:49,0:49:99:217,0,1006	0/0:128,0:128:99:0,249,3259	0/1:54,0:54:99:297,0,1038	0/1:47,0:47:99:124,0,935	0/0:53,0:53:76.96:0,77,999	0/1:45,0:45:99:418,0,880	0/1:65,0:65:99:338,0,1399	0/1:56,0:56:99:161,0,1030	0/1:21,0:21:99:117,0,520
chr10	66032243	.	G	GTGTT	13604.46	PASS	AB=0.841;AC=22;AF=0.393;AN=56;BaseQRankSum=23.309;DP=1554;FS=41.825;HRun=0;HaplotypeScore=558.5483;InbreedingCoeff=-0.6467;MQ=47.95;MQ0=3;MQRankSum=-21.389;QD=11.73;ReadPosRankSum=-4.525;VQSLOD=2.1053;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:62,1:63:29.25:0,29,1684	0/1:20,9:29:99:474,0,1049	0/0:45,0:31:81.25:0,81,1486	0/0:44,3:32:77.56:0,78,1239	0/1:30,5:35:99:147,0,1272	0/1:28,8:35:99:445,0,1032	0/1:44,2:46:99:109,0,1419	0/1:49,11:60:99:880,0,1832	0/1:53,11:64:99:576,0,1953	0/1:67,28:95:99:2195,0,2835	0/1:31,11:42:99:447,0,1430	0/1:51,15:66:99:1043,0,1436	0/1:51,14:65:99:973,0,1443	0/1:58,14:72:99:745,0,1553	0/1:68,9:77:99:427,0,2188	0/1:64,15:79:99:940,0,2149	0/0:50,1:51:33.32:0,33,2090	0/1:36,0:35:23.13:132,0,23	0/1:26,4:29:99:334,0,1047	0/1:37,11:48:99:496,0,1589	0/0:134,0:134:99:0,190,4983	0/1:39,13:52:99:537,0,1683	0/1:31,13:45:99:413,0,1450	0/0:54,0:54:28.26:0,28,1439	0/1:28,14:42:99:734,0,1374	0/1:56,11:67:99:957,0,2221	0/1:46,7:53:99:355,0,1598	0/1:17,4:21:99:245,0,782
chr10	66032612	.	T	TTTGG	2219.58	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-6.577;DP=752;FS=9.898;HRun=0;HaplotypeScore=144.8532;InbreedingCoeff=0.9727;MQ=68.63;MQ0=2;MQRankSum=0.209;QD=37.62;ReadPosRankSum=0.733;VQSLOD=3.4577;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:87.19:0,87,1243	0/0:12,0:12:12.04:0,12,185	0/0:41,0:31:26.07:0,26,357	0/0:34,0:31:29.05:0,29,349	0/0:18,0:18:27.07:0,27,407	0/0:23,0:23:51.16:0,51,783	0/0:36,0:36:51.14:0,51,767	0/0:12,0:24:22.24:0,22,189	1/1:12,23:36:53.82:1280,54,0	0/0:23,0:23:33.11:0,33,506	0/0:25,0:25:48.15:0,48,742	0/0:22,0:22:45.15:0,45,718	0/0:29,0:29:48.05:0,48,912	0/0:20,0:20:36.07:0,36,499	0/0:27,0:27:69.19:0,69,1025	0/0:18,0:18:39.11:0,39,579	0/0:43,0:43:84.25:0,84,1293	1/1:6,17:23:45.15:1061,45,0	0/0:22,0:22:33.10:0,33,504	0/0:29,0:29:42.13:0,42,642	0/0:56,0:56:99:0,102,1473	0/0:19,0:19:51.16:0,51,787	0/0:15,0:15:18.06:0,18,287	0/0:25,0:25:60.11:0,60,823	0/0:16,0:16:30.10:0,30,479	0/0:31,0:31:72.19:0,72,1022	0/0:30,0:29:75.22:0,75,1144	0/0:8,0:8:18.04:0,18,262
chr10	66033788	.	A	AGAG	16366.73	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=-5.769;DP=649;FS=1.319;HRun=0;HaplotypeScore=94.2472;InbreedingCoeff=0.9614;MQ=65.57;MQ0=15;MQRankSum=-1.591;QD=39.63;ReadPosRankSum=5.001;VQSLOD=5.4006;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:66.22:0,66,1004	1/1:2,7:10:14.08:261,14,0	0/0:60,0:32:31.35:0,31,588	0/0:72,0:31:58.08:0,58,808	0/0:16,0:16:27.09:0,27,398	1/1:4,20:24:48.16:1024,48,0	1/1:3,19:22:45.15:960,45,0	1/1:8,19:25:57.19:1074,57,0	1/1:0,15:17:36.12:767,36,0	1/1:3,18:21:54.17:1026,54,0	1/1:3,9:12:21.07:436,21,0	1/1:1,26:27:54.19:1152,54,0	0/0:12,0:12:30.10:0,30,457	1/1:6,22:27:54.19:1142,54,0	1/1:2,13:14:30.10:640,30,0	1/1:4,12:17:27.09:575,27,0	1/1:7,18:27:56.19:1208,56,0	1/1:9,8:17:36.12:677,36,0	1/1:2,10:12:29.11:517,29,0	1/1:4,10:13:24.08:511,24,0	1/1:4,33:36:66.23:1408,66,0	1/1:5,13:18:27.09:575,27,0	0/0:11,0:10:24.08:0,24,367	0/0:34,0:34:84.28:0,84,1261	1/1:4,10:14:18.06:383,18,0	1/1:1,22:23:66.19:1257,66,0	1/1:6,13:17:38.79:711,39,0	1/1:6,5:11:3.01:64,3,0
chr10	66033796	.	A	AG	2982.77	PASS	AB=0.973;AC=30;AF=0.536;AN=56;BaseQRankSum=10.593;DP=615;FS=0.363;HRun=2;HaplotypeScore=115.6411;InbreedingCoeff=0.1235;MQ=62.86;MQ0=15;MQRankSum=-2.096;QD=7.77;ReadPosRankSum=8.995;VQSLOD=0.2645;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:70.44:0,70,880	1/1:9,1:10:14.20:97,14,0	0/0:62,0:32:47.35:0,47,804	0/0:73,0:33:60.05:0,60,940	0/0:12,0:12:30.10:0,30,388	1/1:22,0:22:9.40:169,9,0	1/1:20,1:21:42.13:201,42,0	0/1:22,1:21:99:176,0,115	0/1:20,0:20:36.80:129,0,37	0/1:20,0:20:18.64:208,0,19	1/1:12,0:12:16.79:78,17,0	1/1:26,0:25:50.77:261,51,0	0/0:12,0:12:36.12:0,36,466	0/1:24,2:25:6.92:177,0,7	0/1:17,0:16:78.72:93,0,79	1/1:13,1:14:25.22:118,25,0	1/1:23,0:23:51.97:240,52,0	0/1:16,2:18:70.36:226,0,70	0/1:12,1:13:32.83:147,0,33	1/1:11,0:10:22.37:105,22,0	0/1:37,0:36:87.88:209,0,88	0/1:14,0:14:9.55:89,0,10	0/0:8,0:8:24.08:0,24,312	0/0:33,0:33:93.30:0,93,1202	0/1:12,0:12:53.62:55,0,54	0/1:23,0:23:57.77:291,0,58	0/1:18,0:17:41.46:91,0,41	1/1:3,0:3:2.80:13,3,0
chr10	66033827	.	C	CA	551.41	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-2.629;DP=519;FS=0.898;HRun=4;HaplotypeScore=86.8446;InbreedingCoeff=0.8999;MQ=62.66;MQ0=0;MQRankSum=-2.508;QD=30.63;ReadPosRankSum=0.924;VQSLOD=3.7900;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:29:78.22:0,78,885	0/0:6,0:6:18.05:0,18,204	0/0:32,0:27:51.99:0,52,544	0/0:37,0:25:25.53:0,26,603	0/0:8,0:8:18.05:0,18,204	0/0:22,0:22:57.16:0,57,646	0/0:19,0:19:45.13:0,45,510	0/0:29,0:28:72.17:0,72,795	0/0:17,0:17:39.11:0,39,442	0/0:16,0:16:45.13:0,45,510	0/0:9,0:9:21.06:0,21,238	0/0:23,0:23:48.10:0,48,525	0/0:18,0:18:48.14:0,48,544	0/0:21,0:21:54.15:0,54,611	0/0:16,0:15:39.11:0,39,442	0/0:14,0:14:24.07:0,24,272	0/0:25,0:25:66.16:0,66,735	1/1:3,15:18:48.16:646,48,0	0/0:23,0:22:60.13:0,60,666	0/0:7,0:7:21.06:0,21,238	0/0:38,0:38:99:0,111,1257	0/0:14,0:14:30.08:0,30,340	0/0:8,0:8:15.04:0,15,170	0/0:28,0:28:75.19:0,75,839	0/0:8,0:8:18.05:0,18,204	0/0:13,0:13:36.09:0,36,400	0/0:13,0:13:30.08:0,30,340	0/0:3,0:3:9.03:0,9,102
chr10	66034091	.	CTCT	C	1392.96	PASS	AB=0.858;AC=24;AF=0.462;AN=52;BaseQRankSum=0.881;DP=296;FS=13.853;HRun=0;HaplotypeScore=93.1207;InbreedingCoeff=-0.3700;MQ=29.67;MQ0=20;MQRankSum=0.198;QD=7.65;ReadPosRankSum=2.086;VQSLOD=2.0147;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:9,1:10:10.93:103,0,11	0/1:2,1:3:29.99:30,0,39	0/0:43,0:4:9.03:0,9,154	0/0:46,0:4:10.27:0,10,144	0/0:7,2:9:2.49:0,2,6	0/1:9,0:9:63.80:128,0,64	0/1:8,2:10:50.81:57,0,51	0/0:10,0:10:17.55:0,18,222	./.	0/1:14,1:14:79.52:80,0,214	0/1:9,0:7:38.15:38,0,41	0/1:7,1:8:46.75:47,0,81	0/1:6,1:8:46.06:48,0,46	0/1:4,1:5:28.34:64,0,28	0/1:8,3:9:98.46:122,0,98	1/1:2,1:3:8.68:49,9,0	0/1:3,0:3:0.09:0,0,0	./.	0/1:2,1:3:34.88:40,0,35	0/1:8,0:8:13.20:13,0,51	0/0:4,0:4:0:0,0,0	1/1:16,5:18:0.11:237,0,0	0/1:10,1:11:22.67:70,0,23	0/1:3,2:4:0:0,0,0	0/1:9,6:15:99:160,0,164	0/1:7,3:9:71.01:133,0,71	0/1:9,2:10:3.28:3,0,41	1/1:3,0:4:11.19:112,11,0
chr10	66034101	.	TC	T	1101.87	PASS	AB=0.978;AC=26;AF=0.500;AN=52;BaseQRankSum=1.621;DP=327;FS=0.000;HRun=2;HaplotypeScore=97.8978;InbreedingCoeff=-0.3117;MQ=29.49;MQ0=21;MQRankSum=0.776;QD=5.25;ReadPosRankSum=-1.360;VQSLOD=-0.0170;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:12,0:12:13.87:156,14,0	0/1:6,0:5:28.26:34,0,28	0/0:43,0:4:11.87:0,12,134	0/0:48,0:4:8.19:0,8,103	0/0:9,0:9:14.74:0,15,86	0/1:12,0:12:18.39:95,0,18	0/1:11,0:11:30.97:56,0,31	0/0:9,0:9:14.09:0,14,80	./.	0/1:17,1:17:49.66:103,0,50	0/1:8,1:7:27.49:27,0,32	0/1:5,0:5:17.07:17,0,28	0/1:9,0:9:19.27:19,0,49	0/1:6,0:6:16.74:17,0,27	0/1:12,1:11:66.98:91,0,67	1/1:3,0:3:1.03:10,1,0	1/1:4,0:4:1.53:28,2,0	./.	0/1:5,0:5:14.05:14,0,51	0/1:11,0:10:31.94:32,0,82	1/1:4,0:4:5.93:40,6,0	0/1:23,0:21:2.65:166,0,3	0/1:11,1:12:15:80,0,15	0/0:5,0:4:0:0,0,0	0/1:17,1:18:84.89:118,0,85	0/1:13,0:12:54.55:89,0,55	0/1:12,0:11:0.55:1,0,42	1/1:4,0:4:2.93:58,3,0
chr10	66034102	.	C	CT	1752.04	PASS	AB=0.883;AC=25;AF=0.500;AN=50;BaseQRankSum=0.890;DP=377;FS=1.147;HRun=2;HaplotypeScore=144.3741;InbreedingCoeff=-0.5130;MQ=29.13;MQ0=22;MQRankSum=-1.184;QD=6.59;ReadPosRankSum=-0.958;VQSLOD=0.3665;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:16:18.85:169,19,0	0/1:6,0:5:28.25:42,0,28	0/0:43,0:4:11.87:0,12,134	0/0:49,0:4:8.19:0,8,103	0/0:6,4:9:14.74:0,15,86	0/1:8,6:14:18.70:128,0,19	0/1:9,2:11:30.57:58,0,31	0/1:10,0:10:37.32:37,0,60	./.	0/1:15,5:20:14.39:335,0,14	0/1:8,1:7:27.70:28,0,32	0/1:4,2:6:20.06:49,0,20	0/1:11,1:12:31.13:31,0,41	0/1:5,3:7:23.51:44,0,24	0/1:14,2:14:67.97:94,0,68	0/1:5,0:5:2.88:7,0,3	0/1:5,0:5:3.84:32,0,4	./.	0/1:7,0:7:26.74:27,0,47	0/1:10,2:11:28.85:29,0,87	1/1:9,0:8:1:36,1,0	0/1:23,5:24:13.59:172,0,14	0/1:13,2:14:18.28:78,0,18	./.	0/1:19,1:20:77.34:124,0,77	0/1:14,2:15:41.48:210,0,41	0/1:13,3:14:44.19:55,0,44	1/1:2,2:4:11.81:114,12,0
chr10	66034137	.	CTGGGGCTGGCGGT	C	707.14	PASS	AB=0.948;AC=28;AF=0.560;AN=50;BaseQRankSum=1.994;DP=219;FS=0.000;HRun=0;HaplotypeScore=84.2956;InbreedingCoeff=0.2574;MQ=52.55;MQ0=7;MQRankSum=-0.301;QD=4.59;ReadPosRankSum=1.503;VQSLOD=1.4723;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,0:10:0.84:2,1,0	1/1:4,1:4:2.85:116,3,0	0/0:6,0:6:11.39:0,11,80	0/0:18,0:3:6.02:0,6,181	0/1:9,0:8:0.01:0,0,0	0/1:11,0:11:6.99:7,0,13	1/1:2,0:2:2.68:11,3,0	0/0:7,0:5:8.42:0,8,46	1/1:6,0:4:3.01:52,3,0	0/0:16,0:16:16.20:0,16,200	0/1:8,0:6:0:1,0,0	0/0:5,1:6:1.41:0,1,3	1/1:8,0:8:0.94:2,1,0	1/1:7,0:6:0.47:1,0,0	0/1:9,0:8:0:0,0,0	1/1:6,0:6:2.19:5,2,0	0/1:1,1:2:12.51:120,0,13	./.	./.	0/0:4,0:4:2.50:0,2,9	1/1:6,0:5:2.50:9,2,0	1/1:18,2:17:5.53:251,6,0	0/1:13,0:12:0.01:0,0,0	./.	1/1:7,1:8:3.01:126,3,0	0/1:10,1:10:96.71:123,0,97	0/1:13,0:12:1.67:2,0,30	0/0:3,0:3:4.20:0,4,22
chr10	66034266	.	CG	C	1323.37	PASS	AB=1.000;AC=51;AF=0.944;AN=54;BaseQRankSum=0.841;DP=125;FS=0.000;HRun=1;HaplotypeScore=158.5777;InbreedingCoeff=0.2858;MQ=58.21;MQ0=0;MQRankSum=0.048;QD=10.85;ReadPosRankSum=0.877;VQSLOD=1.7051;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,5:5:13.96:64,14,0	1/1:0,6:6:15.58:76,16,0	1/1:0,0:1:1.25:3,1,0	0/1:4,0:4:4.38:4,0,20	1/1:0,8:8:15.36:68,15,0	1/1:0,4:4:11.35:54,11,0	1/1:0,5:5:4.11:32,4,0	1/1:0,5:5:14.84:100,15,0	1/1:0,9:9:25.45:123,25,0	1/1:0,4:4:11.39:69,11,0	1/1:0,2:2:2.03:5,2,0	1/1:0,5:5:14.24:70,14,0	1/1:0,5:5:11.15:54,11,0	1/1:0,3:3:8.47:40,8,0	1/1:0,3:3:8.55:42,9,0	1/1:0,4:4:11.40:57,11,0	1/1:0,8:8:11.89:60,12,0	1/1:0,3:3:4.24:29,4,0	1/1:0,5:5:14.83:103,15,0	1/1:0,5:5:10.54:47,11,0	1/1:0,4:4:5.58:26,6,0	1/1:0,3:3:2.08:13,2,0	1/1:0,5:5:13.71:60,14,0	0/0:0,3:3:1.56:0,2,3	1/1:0,4:4:11.33:60,11,0	1/1:0,6:6:16.37:102,16,0	1/1:0,6:6:9.81:52,10,0	./.
chr10	66034270	.	T	TC	1264.12	PASS	AB=0.500;AC=47;AF=0.904;AN=52;BaseQRankSum=1.657;DP=122;FS=3.993;HRun=2;HaplotypeScore=163.6837;InbreedingCoeff=0.4119;MQ=43.41;MQ0=0;MQRankSum=0.567;QD=10.80;ReadPosRankSum=1.437;VQSLOD=2.1294;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,5:5:13.89:64,14,0	1/1:0,6:6:16.14:97,16,0	./.	0/0:2,0:2:4.72:0,5,20	1/1:0,8:8:15.21:65,15,0	1/1:0,4:4:11.18:53,11,0	1/1:0,5:5:3.50:30,3,0	1/1:0,5:5:14.78:95,15,0	1/1:1,8:9:25.31:122,25,0	1/1:0,4:4:11.24:65,11,0	0/1:0,2:2:0.02:0,0,0	1/1:0,5:5:14.09:69,14,0	1/1:0,5:5:12.41:56,12,0	1/1:0,3:3:8.29:38,8,0	1/1:0,3:3:8.43:41,8,0	1/1:0,4:4:11.27:56,11,0	1/1:0,8:8:12.06:57,12,0	1/1:0,3:3:4.05:28,4,0	1/1:0,5:5:14.77:97,15,0	1/1:0,5:5:11.84:52,12,0	1/1:0,4:4:5.04:24,5,0	1/1:0,3:3:1.47:11,1,0	1/1:0,5:5:13.37:58,13,0	0/0:0,3:3:1.26:0,1,3	1/1:0,4:4:10.89:50,11,0	1/1:0,6:6:15.19:93,15,0	1/1:0,5:6:6.33:41,6,0	./.
chr10	66034290	.	GA	G	4510.56	PASS	AC=50;AF=0.962;AN=52;BaseQRankSum=0.095;DP=157;FS=0.000;HRun=1;HaplotypeScore=200.8415;InbreedingCoeff=0.2910;MQ=28.94;MQ0=0;MQRankSum=-1.272;QD=29.67;ReadPosRankSum=1.307;VQSLOD=4.4176;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,5:5:15.04:174,15,0	1/1:0,8:8:24.04:268,24,0	./.	./.	1/1:0,11:11:25.78:264,26,0	1/1:0,4:4:12.04:140,12,0	1/1:0,9:9:25.36:259,25,0	1/1:0,3:3:8.39:76,8,0	1/1:0,10:10:30.09:353,30,0	1/1:0,7:7:18.06:221,18,0	1/1:0,3:3:2.96:19,3,0	1/1:0,5:5:15.04:175,15,0	1/1:0,8:8:21.01:238,21,0	1/1:0,7:7:21.06:239,21,0	1/1:0,5:5:15.04:168,15,0	1/1:0,4:4:11.95:123,12,0	1/1:0,10:10:19.58:190,20,0	1/1:0,2:2:2.37:34,2,0	1/1:0,4:4:12.04:147,12,0	1/1:0,9:9:23.68:261,24,0	1/1:0,3:3:9.02:90,9,0	1/1:0,6:6:14.51:142,15,0	1/1:0,5:5:15.04:163,15,0	0/0:0,5:5:1.56:0,2,3	1/1:0,7:7:21.06:238,21,0	1/1:0,9:9:26.95:308,27,0	1/1:1,5:6:16.93:152,17,0	1/1:0,2:2:6.02:70,6,0
chr10	66034294	.	GC	G	4552	PASS	AC=50;AF=0.962;AN=52;BaseQRankSum=0.077;DP=160;FS=0.000;HRun=1;HaplotypeScore=194.8363;InbreedingCoeff=0.3047;MQ=35.08;MQ0=0;MQRankSum=-1.169;QD=29.75;ReadPosRankSum=1.664;VQSLOD=4.4865;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,5:5:15.04:173,15,0	1/1:0,8:8:24.03:268,24,0	./.	./.	1/1:0,11:11:25.78:263,26,0	1/1:0,4:4:12.04:139,12,0	1/1:0,9:9:25.30:258,25,0	1/1:0,3:3:8.39:76,8,0	1/1:0,10:10:30.09:351,30,0	1/1:0,7:7:18.06:220,18,0	1/1:1,3:4:5.58:32,6,0	1/1:0,5:5:15.04:175,15,0	1/1:0,8:8:21.01:239,21,0	1/1:0,7:7:21.06:237,21,0	1/1:0,5:5:15.04:168,15,0	1/1:0,4:4:11.99:125,12,0	1/1:0,10:10:22.65:223,23,0	1/1:0,2:2:2.37:34,2,0	1/1:0,4:4:12.04:147,12,0	1/1:0,9:9:23.68:260,24,0	1/1:0,3:3:9.02:90,9,0	1/1:0,6:6:14.51:141,15,0	1/1:0,5:5:15.04:163,15,0	0/0:0,5:5:1.56:0,2,3	1/1:0,7:7:21.06:237,21,0	1/1:0,9:9:26.95:308,27,0	1/1:1,5:6:17.13:155,17,0	1/1:0,2:2:6.02:69,6,0
chr10	66035035	.	AT	A	653.34	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.098;DP=572;FS=6.129;HRun=8;HaplotypeScore=55.4784;InbreedingCoeff=0.8781;MQ=69.77;MQ0=2;MQRankSum=-2.221;QD=21.78;ReadPosRankSum=-3.398;VQSLOD=2.6301;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:34:74.50:0,74,991	0/0:11,0:11:33.10:0,33,398	0/0:16,0:12:25.88:0,26,278	0/0:16,0:14:4.75:0,5,208	0/0:27,0:27:72.22:0,72,869	0/0:22,0:22:51.16:0,51,616	0/0:15,0:15:42.13:0,42,507	1/1:3,27:29:78.11:748,78,0	0/0:19,0:19:57.17:0,57,688	0/0:32,0:32:90.28:0,90,1087	0/0:23,0:23:63.19:0,63,756	0/0:22,0:22:57.16:0,57,676	0/0:18,0:18:51.16:0,51,615	0/0:25,0:25:63.18:0,63,750	0/0:19,0:19:57.17:0,57,688	0/0:17,0:17:48.15:0,48,580	0/0:13,0:13:36.11:0,36,435	0/0:20,0:20:57.17:0,57,688	0/0:15,0:14:36.08:0,36,419	0/0:21,0:20:48.15:0,48,578	0/0:14,0:14:42.13:0,42,507	0/0:9,0:9:24.07:0,24,290	0/0:12,0:12:36.11:0,36,435	0/0:17,0:17:45.14:0,45,539	0/0:19,1:20:22.22:0,22,541	0/0:28,0:28:84.26:0,84,1014	0/0:35,0:34:90.28:0,90,1085	0/0:22,0:21:63.19:0,63,760
chr10	66035325	.	C	CT	4955.09	PASS	AB=0.672;AC=28;AF=0.500;AN=56;BaseQRankSum=-10.718;DP=581;FS=3.247;HRun=12;HaplotypeScore=59.1398;InbreedingCoeff=0.7287;MQ=69.15;MQ0=0;MQRankSum=-1.585;QD=14.84;ReadPosRankSum=1.787;VQSLOD=5.7339;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:49.42:0,49,498	1/1:1,10:11:24.04:234,24,0	0/1:15,1:14:11.90:12,0,73	0/0:14,0:15:13.39:0,13,95	0/0:21,0:21:42.27:0,42,321	0/1:6,16:22:1.75:308,0,2	1/1:5,15:20:20.16:358,20,0	0/0:29,1:30:68.55:0,69,503	0/0:16,0:18:48.76:0,49,335	0/0:25,1:26:26.62:0,27,349	0/0:16,0:18:39.12:0,39,273	1/1:4,20:24:45.07:438,45,0	0/0:15,0:15:32.74:0,33,236	1/1:3,17:20:20.16:358,20,0	1/1:10,8:18:15.02:146,15,0	0/0:13,0:13:32.74:0,33,239	0/1:6,23:29:2.55:462,0,3	0/0:22,0:21:45.58:0,46,330	1/1:4,19:23:43.59:483,44,0	1/1:5,16:21:1.21:327,1,0	0/1:9,16:25:7.76:256,0,8	1/1:1,12:13:14.19:299,14,0	0/0:11,0:14:36.86:0,37,250	0/0:11,0:11:17.82:0,18,131	1/1:3,20:23:23.16:387,23,0	1/1:9,14:24:41.86:381,42,0	1/1:12,16:28:30.05:292,30,0	1/1:4,13:17:6.88:216,7,0
chr10	66036194	.	GCTA	G	705.02	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.477;DP=639;FS=2.133;HRun=0;HaplotypeScore=90.7277;InbreedingCoeff=0.9986;MQ=90.72;MQ0=0;MQRankSum=-6.160;QD=41.47;ReadPosRankSum=1.688;VQSLOD=5.1394;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,102,2502	0/0:10,0:10:30.10:0,30,722	0/0:15,0:15:45.15:0,45,1023	0/0:35,0:35:99:0,105,2493	0/0:19,0:19:57.20:0,57,1371	0/0:10,0:10:30.10:0,30,724	0/0:30,0:30:90.31:0,90,2160	0/0:38,0:38:99:0,111,2700	0/0:19,0:19:57.20:0,57,1403	0/0:21,0:21:57.20:0,57,1363	0/0:12,0:12:36.12:0,36,863	0/0:31,0:31:90.30:0,90,2163	0/0:25,0:25:75.26:0,75,1811	0/0:24,0:24:72.25:0,72,1745	0/0:25,0:25:75.26:0,75,1798	0/0:30,0:30:90.31:0,90,2193	0/0:34,0:34:99:0,102,2493	1/1:1,16:17:45.10:800,45,0	0/0:19,0:19:57.20:0,57,1374	0/0:20,0:20:60.21:0,60,1475	0/0:41,0:41:99:0,123,2843	0/0:18,0:18:54.19:0,54,1294	0/0:13,0:13:36.12:0,36,880	0/0:26,0:26:78.27:0,78,1919	0/0:14,0:13:42.14:0,42,1028	0/0:30,0:30:90.31:0,90,2186	0/0:13,0:13:39.13:0,39,948	0/0:15,0:15:45.15:0,45,1109
chr10	66036449	.	CGT	C	4543.89	PASS	AB=0.746;AC=30;AF=0.536;AN=56;BaseQRankSum=4.835;DP=546;FS=2.102;HRun=0;HaplotypeScore=97.2505;InbreedingCoeff=0.5973;MQ=60.71;MQ0=3;MQRankSum=0.790;QD=14.47;ReadPosRankSum=3.510;VQSLOD=4.9804;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:38.16:0,38,694	1/1:2,10:14:32.72:335,33,0	0/0:15,0:8:0:0,0,0	0/0:24,0:9:6.49:0,6,84	0/0:11,0:11:21.07:0,21,319	1/1:16,5:25:1.93:235,2,0	1/1:13,9:24:7.79:276,8,0	0/0:34,1:35:2.11:0,2,263	1/1:7,0:21:34.09:168,34,0	0/0:11,0:21:34.20:0,34,350	0/0:10,0:18:13.33:0,13,148	1/1:2,7:10:20.89:219,21,0	0/1:9,1:10:16.14:16,0,191	1/1:5,7:15:29.58:281,30,0	1/1:2,12:16:38.78:404,39,0	0/0:8,0:13:17.98:0,18,153	0/1:16,16:35:35.62:464,0,36	0/0:6,0:18:29.98:0,30,290	0/1:10,4:15:31.39:102,0,31	0/1:10,9:19:19.14:246,0,19	1/1:9,14:23:34.94:409,35,0	1/1:4,8:13:20.85:218,21,0	0/0:20,0:21:29.88:0,30,442	0/0:19,0:19:18.58:0,19,491	1/1:8,22:31:53.94:594,54,0	1/1:13,6:20:20.87:208,21,0	1/1:6,10:17:23.90:253,24,0	1/1:2,3:6:11.87:117,12,0
chr10	66039385	.	AAAG	A	690.06	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.573;DP=537;FS=3.486;HRun=0;HaplotypeScore=74.2894;InbreedingCoeff=0.9709;MQ=64.86;MQ0=2;MQRankSum=-0.101;QD=30.00;ReadPosRankSum=3.302;VQSLOD=3.8071;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:47:99:0,120,2392	0/0:8,0:8:24.08:0,24,484	0/0:11,0:9:24.07:0,24,395	0/0:9,0:7:18.06:0,18,312	0/0:20,0:20:60.18:0,60,1121	0/0:13,0:13:36.11:0,36,704	0/0:20,0:20:57.16:0,57,1038	0/0:28,0:28:65.51:0,66,1035	0/0:10,0:10:27.09:0,27,544	0/0:21,0:21:63.19:0,63,1184	0/0:13,0:13:33.09:0,33,599	0/0:16,0:16:45.13:0,45,830	0/0:13,0:13:36.11:0,36,709	0/0:6,0:6:15.04:0,15,274	0/0:18,0:18:51.17:0,51,1037	0/0:18,0:18:51.15:0,51,944	0/0:46,0:46:99:0,123,2381	1/1:3,20:23:37.27:785,37,0	0/0:22,0:22:57.17:0,57,1059	0/0:25,0:25:72.22:0,72,1368	0/0:16,0:16:48.08:0,48,795	0/0:15,0:15:39.12:0,39,747	0/0:14,0:14:36.12:0,36,725	0/0:27,0:27:69.22:0,69,1381	0/0:11,0:11:33.10:0,33,627	0/0:19,0:19:54.17:0,54,1040	0/0:30,0:30:84.16:0,84,1416	0/0:17,0:17:45.15:0,45,933
chr10	66040500	.	AAGCGCAAGGCTCTGG	A	785.49	PASS	AB=0.650;AC=1;AF=0.018;AN=56;BaseQRankSum=4.351;DP=408;FS=9.340;HRun=0;HaplotypeScore=158.5097;InbreedingCoeff=-0.0262;MQ=59.31;MQ0=6;MQRankSum=-4.316;QD=60.42;ReadPosRankSum=0.800;VQSLOD=2.8135;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:57.20:0,57,3672	0/0:4,0:4:6.02:0,6,302	0/0:10,0:4:9.03:0,9,454	0/0:26,0:12:33.09:0,33,1339	0/0:18,0:18:42.14:0,42,2916	0/0:14,0:14:27.09:0,27,1782	0/0:18,0:18:45.14:0,45,2793	0/0:14,0:14:30.10:0,30,1675	0/1:6,7:13:99:860,0,194	0/0:12,0:12:24.08:0,24,1350	0/0:11,0:11:24.08:0,24,1661	0/0:16,0:16:36.12:0,36,2275	0/0:18,0:18:45.15:0,45,3079	0/0:11,0:11:30.10:0,30,2134	0/0:7,0:7:19.31:0,19,1310	0/0:9,0:9:21.07:0,21,1398	0/0:17,0:17:45.15:0,45,2430	0/0:22,0:22:42.13:0,42,2453	0/0:9,0:9:15.05:0,15,976	0/0:7,0:7:15.05:0,15,1044	0/0:29,0:29:79.51:0,80,5270	0/0:13,0:13:27.09:0,27,1845	0/0:9,0:9:21.06:0,21,1122	0/0:24,0:24:63.22:0,63,4190	0/0:16,0:16:42.14:0,42,2595	0/0:18,0:18:45.15:0,45,2851	0/0:11,0:11:27.09:0,27,1835	0/0:6,0:6:18.06:0,18,1301
chr10	66040550	.	G	GA	471.17	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.620;DP=348;FS=19.247;HRun=0;HaplotypeScore=55.4914;InbreedingCoeff=0.5430;MQ=66.28;MQ0=3;MQRankSum=-0.518;QD=19.63;ReadPosRankSum=6.228;VQSLOD=3.3826;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:57.03:0,57,615	0/0:3,0:3:3.88:0,4,27	0/0:10,0:6:16.80:0,17,106	0/0:12,0:8:13.46:0,13,95	0/0:11,0:11:26.94:0,27,232	0/0:12,0:12:17.99:0,18,156	0/0:17,0:17:18.11:0,18,157	0/0:10,0:9:18:0,18,159	0/0:13,0:13:1.43:0,1,46	0/0:12,0:12:14.74:0,15,101	0/0:10,0:10:18.10:0,18,138	0/0:10,0:10:12.08:0,12,52	0/0:15,0:14:41.91:0,42,434	0/0:8,0:8:14.77:0,15,74	0/0:5,0:5:5.93:0,6,44	0/0:7,0:7:12.35:0,12,83	0/0:18,0:18:24.08:0,24,150	1/1:3,21:24:41.77:565,42,0	0/0:7,0:7:14.89:0,15,110	0/0:8,0:8:16.80:0,17,132	0/0:26,0:26:60.08:0,60,510	0/0:12,0:12:21.66:0,22,158	0/0:8,0:8:14.78:0,15,127	0/0:24,0:24:66.06:0,66,751	0/0:18,0:18:16.68:0,17,133	0/0:12,0:12:24.73:0,25,212	0/0:11,0:11:16.79:0,17,119	0/0:4,0:4:7.74:0,8,49
chr10	66040552	.	G	GT	296.19	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.326;DP=354;FS=0.000;HRun=0;HaplotypeScore=55.6638;InbreedingCoeff=0.5832;MQ=68.78;MQ0=3;MQRankSum=-1.394;QD=24.68;ReadPosRankSum=3.707;VQSLOD=4.6930;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:57.04:0,57,619	0/0:4,0:4:6.87:0,7,49	0/0:11,0:7:17.37:0,17,136	0/0:12,0:9:6.69:0,7,100	0/0:10,0:10:20.92:0,21,181	0/0:13,0:13:20.94:0,21,186	0/0:16,0:16:8.47:0,8,108	0/0:14,0:13:23.83:0,24,211	1/1:2,10:12:8.22:378,8,0	0/0:14,0:14:14.51:0,15,81	0/0:10,0:10:18.87:0,19,154	0/0:10,0:10:12.87:0,13,53	0/0:16,0:15:41.94:0,42,437	0/0:8,0:8:14.51:0,15,71	0/0:6,0:6:0:0,0,0	0/0:6,0:6:12.34:0,12,82	0/0:16,0:16:14.42:0,14,91	0/0:24,0:24:37.23:0,37,168	0/0:7,0:7:14.90:0,15,110	0/0:7,0:7:17.03:0,17,134	0/0:27,0:27:56.97:0,57,478	0/0:11,0:11:23.08:0,23,173	0/0:8,0:8:11.95:0,12,109	0/0:24,0:24:66.07:0,66,756	0/0:19,0:19:13.68:0,14,106	0/0:12,0:12:18.79:0,19,160	0/0:11,0:11:19.32:0,19,143	0/0:4,0:4:7.74:0,8,50
chr10	66040638	.	A	AC	4256.58	PASS	AB=0.628;AC=27;AF=0.482;AN=56;BaseQRankSum=-2.617;DP=444;FS=2.519;HRun=9;HaplotypeScore=57.5624;InbreedingCoeff=0.4709;MQ=76.48;MQ0=0;MQRankSum=0.129;QD=16.50;ReadPosRankSum=-1.541;VQSLOD=4.6554;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,2:23:20.79:0,21,410	0/1:6,6:12:34.02:84,0,34	0/0:13,0:11:20.89:0,21,167	0/0:15,0:11:6.47:0,6,53	0/0:16,0:16:25.14:0,25,337	0/1:5,13:18:36.28:298,0,36	1/1:4,16:20:36.10:398,36,0	0/0:16,0:15:11.98:0,12,104	1/1:4,0:6:8.68:54,9,0	0/0:13,0:15:34.03:0,34,269	0/0:16,0:17:13.25:0,13,266	1/1:1,15:16:30.08:332,30,0	0/0:18,0:18:47.98:0,48,415	0/1:3,10:13:21.99:235,0,22	1/1:2,9:12:21.61:215,22,0	0/0:14,0:16:46.06:0,46,374	1/1:3,20:24:21.91:453,22,0	1/1:9,3:17:32.21:238,32,0	1/1:4,11:15:7.03:306,7,0	0/1:6,6:13:5.18:145,0,5	1/1:3,11:14:21.06:232,21,0	1/1:4,11:15:21.05:227,21,0	0/0:15,0:15:38.99:0,39,338	0/0:21,0:21:44.97:0,45,391	1/1:3,16:19:10.04:336,10,0	0/1:4,10:15:16.01:272,0,16	0/1:3,17:20:13:326,0,13	0/1:7,2:9:33.98:107,0,34
chr10	66040817	.	TTCGAGCC	T	529.61	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.695;DP=645;FS=1.442;HRun=0;HaplotypeScore=146.7498;InbreedingCoeff=0.9965;MQ=88.92;MQ0=0;MQRankSum=-4.732;QD=52.96;ReadPosRankSum=1.590;VQSLOD=3.6890;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:93.32:0,93,3183	0/0:11,0:11:27.09:0,27,1038	0/0:21,0:21:57.11:0,57,1835	0/0:27,0:27:74.62:0,75,2526	0/0:22,0:22:60.12:0,60,2056	0/0:25,0:25:66.23:0,66,2530	0/0:39,0:39:99:0,108,3795	0/0:28,0:28:76.49:0,76,2449	0/0:31,0:31:93.30:0,93,3496	0/0:23,0:23:63.20:0,63,2288	0/0:14,0:14:42.14:0,42,1582	0/0:23,0:23:69.24:0,69,2641	0/0:16,0:16:39.13:0,39,1528	0/0:24,0:24:69.21:0,69,2565	0/0:16,0:16:45.15:0,45,1627	0/0:25,0:25:75.26:0,75,2728	0/0:37,0:37:99:0,105,3963	1/1:1,9:10:24.08:623,24,0	0/0:18,0:17:54.19:0,54,1777	0/0:20,0:20:57.20:0,57,2151	0/0:45,0:45:99:0,132,4996	0/0:15,0:15:33.11:0,33,1248	0/0:15,0:15:39.13:0,39,1468	0/0:22,0:22:66.23:0,66,2368	0/0:17,0:17:48.16:0,48,1879	0/0:28,0:28:81.26:0,81,2883	0/0:29,0:29:84.29:0,84,3210	0/0:13,0:13:39.13:0,39,1385
chr10	66041026	.	AG	A	767.75	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.327;DP=628;FS=0.000;HRun=4;HaplotypeScore=62.1441;InbreedingCoeff=0.9925;MQ=73.62;MQ0=0;MQRankSum=-0.670;QD=30.71;ReadPosRankSum=2.065;VQSLOD=3.8403;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:87.26:0,87,1179	0/0:11,0:11:30.10:0,30,420	0/0:19,0:17:35.85:0,36,420	0/0:13,0:13:18.89:0,19,336	0/0:26,0:26:78.21:0,78,1037	0/0:25,0:25:75.23:0,75,1017	0/0:16,0:16:45.15:0,45,629	0/0:37,0:37:99:0,102,1412	0/0:34,0:34:96.32:0,96,1343	0/0:29,0:29:78.26:0,78,1091	0/0:18,0:18:54.18:0,54,751	0/0:19,0:19:57.15:0,57,747	0/0:17,0:17:51.13:0,51,676	0/0:24,0:24:69.23:0,69,965	0/0:18,0:18:54.17:0,54,739	0/0:15,0:15:42.12:0,42,554	0/0:27,0:27:78.22:0,78,1053	1/1:1,24:25:72.22:863,72,0	0/0:18,0:18:48.15:0,48,654	0/0:23,0:23:69.23:0,69,960	0/0:18,0:18:54.18:0,54,755	0/0:18,0:18:54.18:0,54,749	0/0:16,0:16:48.12:0,48,634	0/0:22,0:22:63.19:0,63,859	0/0:16,0:16:48.14:0,48,641	0/0:42,0:42:99:0,126,1764	0/0:38,0:37:99:0,108,1474	0/0:11,0:11:33.10:0,33,444
chr10	66041466	.	CAG	C	921.10	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.893;DP=657;FS=1.680;HRun=0;HaplotypeScore=128.5228;InbreedingCoeff=0.9979;MQ=88.60;MQ0=0;MQRankSum=-3.300;QD=31.76;ReadPosRankSum=1.936;VQSLOD=5.5666;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,99,1781	0/0:15,0:15:45.15:0,45,828	0/0:28,0:28:78.25:0,78,1314	0/0:19,0:19:45.20:0,45,993	0/0:28,0:28:78.27:0,78,1444	0/0:27,0:27:78.27:0,78,1452	0/0:37,0:37:99:0,99,1800	0/0:24,0:24:72.24:0,72,1314	0/0:18,0:18:54.19:0,54,1005	0/0:29,0:29:78.27:0,78,1456	0/0:16,0:16:48.16:0,48,868	0/0:24,0:24:72.22:0,72,1284	0/0:17,0:17:51.17:0,51,943	0/0:23,0:23:69.22:0,69,1233	0/0:21,0:21:63.22:0,63,1172	0/0:18,0:18:51.17:0,51,955	0/0:26,0:26:72.25:0,72,1299	1/1:0,29:29:69.23:1016,69,0	0/0:24,0:24:72.19:0,72,1289	0/0:31,0:31:90.31:0,90,1682	0/0:36,0:36:99:0,108,2005	0/0:15,0:15:45.15:0,45,829	0/0:20,0:20:60.21:0,60,1117	0/0:20,0:20:57.20:0,57,1058	0/0:18,0:18:51.17:0,51,934	0/0:24,0:24:69.22:0,69,1252	0/0:25,0:25:75.22:0,75,1352	0/0:8,0:8:24.08:0,24,450
chr10	66042916	.	CAG	C	416.89	PASS	AB=0.912;AC=11;AF=0.196;AN=56;BaseQRankSum=11.149;DP=945;FS=13.374;HRun=0;HaplotypeScore=212.1026;InbreedingCoeff=-0.0320;MQ=48.14;MQ0=28;MQRankSum=-10.963;QD=1.63;ReadPosRankSum=-1.503;VQSLOD=0.7095;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:53:99:0,143,2403	0/0:13,4:15:0.36:0,0,41	0/0:67,0:24:31.14:0,31,657	0/0:97,0:33:52.97:0,53,879	0/0:35,0:35:99:0,99,1587	0/0:14,2:16:4.03:0,4,68	0/0:28,0:26:7.64:0,8,150	0/1:35,0:33:59.48:59,0,565	0/0:42,0:39:5:0,5,319	0/0:52,0:49:16.21:0,16,960	0/0:18,0:18:39.07:0,39,390	0/1:21,3:18:6.06:30,0,6	0/0:22,0:22:66.09:0,66,1068	1/1:27,3:26:12.58:52,13,0	0/0:21,11:28:2.71:0,3,7	0/1:31,0:27:5.80:6,0,437	0/1:22,2:23:47.69:48,0,77	0/0:30,0:29:25.09:0,25,460	0/1:13,2:12:10.93:76,0,11	0/0:19,1:19:1.30:0,1,112	0/0:40,1:38:7.36:0,7,121	0/0:25,3:28:10.51:0,11,73	0/0:29,0:29:84.21:0,84,1452	0/0:60,0:59:99:0,159,2565	0/1:13,4:14:0.39:0,0,47	0/1:37,4:37:99:208,0,175	0/1:18,2:19:33.53:52,0,34	0/1:16,2:18:25.85:26,0,63
chr10	66042918	.	G	GAC	6713.79	PASS	AB=0.997;AC=24;AF=0.429;AN=56;BaseQRankSum=-3.205;DP=965;FS=2.053;HRun=0;HaplotypeScore=198.8777;InbreedingCoeff=0.4533;MQ=47.69;MQ0=32;MQRankSum=-3.834;QD=14.05;ReadPosRankSum=-2.217;VQSLOD=4.5902;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:50:99:0,122,1515	0/1:18,0:16:4.48:4,0,18	0/0:66,0:23:36.88:0,37,396	0/0:97,0:33:27.68:0,28,523	0/0:38,0:38:80.58:0,81,950	0/0:17,0:16:4.19:0,4,15	0/1:28,0:26:0.26:0,0,24	1/1:11,30:38:48.67:1179,49,0	1/1:21,23:41:39.10:590,39,0	1/1:27,23:48:99:1910,110,0	1/1:3,16:18:36.12:598,36,0	0/1:27,0:21:6.61:73,0,7	0/0:23,0:23:60.14:0,60,712	0/1:29,0:25:1.36:86,0,1	0/1:35,0:30:5.57:7,0,6	1/1:17,14:27:54.14:794,54,0	1/1:24,0:23:6.28:151,6,0	1/1:17,13:29:63.50:924,64,0	0/1:15,0:11:2.62:54,0,3	0/1:22,0:21:8.81:13,0,9	0/0:42,0:39:5.04:0,5,19	0/0:30,0:29:2.60:0,3,10	0/0:29,0:29:72.12:0,72,886	0/0:60,0:59:99:0,120,1688	0/0:17,0:13:4.91:0,5,20	0/1:42,1:38:16.21:233,0,16	1/1:20,0:19:0.25:97,0,0	0/0:16,0:16:17.84:0,18,78
chr10	66042929	.	ACT	A	3713.57	PASS	AB=0.800;AC=27;AF=0.482;AN=56;BaseQRankSum=10.687;DP=994;FS=3.343;HRun=0;HaplotypeScore=213.6017;InbreedingCoeff=0.5823;MQ=43.06;MQ0=50;MQRankSum=-7.738;QD=8.27;ReadPosRankSum=-2.286;VQSLOD=2.9318;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:47:99:0,131,2372	0/1:16,6:18:10.56:216,0,11	0/0:50,0:17:35.04:0,35,641	0/0:80,0:22:49.97:0,50,854	0/0:30,0:30:84.24:0,84,1532	0/1:15,6:20:18.09:41,0,18	0/1:26,11:32:60.98:202,0,61	0/0:65,0:52:75.50:0,76,969	0/0:49,0:45:40.39:0,40,366	0/0:54,1:51:56.50:0,57,1152	0/0:19,0:18:42.01:0,42,410	1/1:19,9:22:23.58:231,24,0	0/0:24,0:24:69.21:0,69,1242	1/1:14,16:27:20.38:251,20,0	1/1:25,12:32:8.76:104,9,0	0/0:37,0:33:59.90:0,60,651	1/1:13,12:24:29.47:393,29,0	0/1:31,1:30:9.52:10,0,400	1/1:11,7:11:5.97:258,6,0	0/1:13,10:21:29.11:96,0,29	1/1:30,9:34:6.02:91,6,0	1/1:9,20:28:2.95:46,3,0	0/0:27,0:27:80.37:0,80,1424	0/0:59,0:58:99:0,135,2689	1/1:24,4:21:7.83:111,8,0	1/1:24,19:36:43.42:888,43,0	1/1:4,15:18:25.59:331,26,0	1/1:4,14:18:33.07:444,33,0
chr10	66042941	.	ACACACT	A	1422.42	PASS	AB=0.926;AC=14;AF=0.250;AN=56;BaseQRankSum=11.684;DP=980;FS=26.406;HRun=0;HaplotypeScore=255.1172;InbreedingCoeff=-0.0072;MQ=40.50;MQ0=53;MQRankSum=-9.044;QD=4.68;ReadPosRankSum=-0.301;VQSLOD=1.0793;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:51:99:0,129,3275	0/1:20,3:19:89.99:123,0,90	0/0:40,0:12:14.98:0,15,195	0/0:67,0:16:27.61:0,28,407	0/0:33,0:33:69.19:0,69,1577	0/1:19,2:19:5.93:6,0,49	0/0:45,0:39:29.03:0,29,422	0/0:64,0:46:99:0,106,2168	0/0:52,0:49:44.90:0,45,1084	0/0:55,0:52:99:0,132,3408	0/0:17,0:16:36.12:0,36,1038	1/1:25,2:22:8.51:164,9,0	0/0:23,0:23:54.17:0,54,1406	0/1:33,0:30:15.96:127,0,16	0/1:27,8:31:15.98:60,0,16	0/0:36,0:31:72.17:0,72,1755	0/1:20,2:21:6.80:192,0,7	0/0:33,0:30:30.46:0,30,1473	0/1:17,2:12:51.27:134,0,51	0/1:23,1:22:40.85:41,0,97	0/0:44,0:36:2.45:0,2,47	1/1:20,4:22:3.01:51,3,0	0/0:31,0:31:84.03:0,84,2165	0/0:55,0:54:99:0,132,3708	0/0:23,5:21:1.68:0,2,77	0/1:39,1:33:99:352,0,184	0/1:16,1:16:12.66:196,0,13	0/1:17,1:15:42.67:131,0,43
chr10	66042947	.	T	TCACA	2407.87	PASS	AB=0.872;AC=16;AF=0.286;AN=56;BaseQRankSum=12.047;DP=962;FS=19.911;HRun=0;HaplotypeScore=229.3254;InbreedingCoeff=0.0358;MQ=39.99;MQ0=53;MQRankSum=-9.385;QD=6.96;ReadPosRankSum=-1.875;VQSLOD=1.1620;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:48:99:0,132,2162	0/1:17,5:18:99:166,0,121	0/0:34,0:10:17.99:0,18,228	0/0:60,0:16:22.28:0,22,404	0/0:31,0:31:71.96:0,72,1187	0/1:20,3:20:9.50:9,0,49	0/0:42,4:37:22.62:0,23,453	0/0:62,0:44:95.66:0,96,1892	0/0:54,0:50:44.69:0,45,767	0/0:52,0:50:99:0,131,2355	0/0:19,0:18:36.12:0,36,655	1/1:23,4:21:8.66:198,9,0	0/0:21,0:21:56.91:0,57,959	0/1:25,9:29:11.06:246,0,11	0/1:31,6:31:16.09:59,0,16	0/0:30,0:28:75.16:0,75,1223	1/1:17,6:22:2.63:420,3,0	0/0:31,0:28:39.18:0,39,975	0/1:20,2:11:35.26:165,0,35	0/1:24,4:24:43.28:43,0,98	0/0:38,2:30:3.01:0,3,50	1/1:24,3:23:2.41:49,2,0	0/0:32,0:32:84.03:0,84,1389	0/0:52,0:51:99:0,132,2366	0/1:29,2:24:3.35:3,0,72	0/1:31,5:30:99:645,0,163	0/1:13,4:16:24.53:415,0,25	0/1:17,1:15:42.62:146,0,43
chr10	66042951	.	ACT	A	369.01	PASS	AB=0.979;AC=14;AF=0.250;AN=56;BaseQRankSum=9.227;DP=941;FS=0.000;HRun=0;HaplotypeScore=206.2289;InbreedingCoeff=0.1723;MQ=39.97;MQ0=51;MQRankSum=-5.309;QD=1.15;ReadPosRankSum=-2.677;VQSLOD=2.2027;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:49:99:0,135,2268	0/1:24,0:19:7.06:7,0,143	0/0:26,1:9:20.42:0,20,170	0/0:56,1:16:35.14:0,35,454	0/0:29,0:29:75.04:0,75,1205	0/0:22,0:19:4.15:0,4,61	0/0:47,0:38:12.45:0,12,268	0/0:57,0:40:99:0,101,1937	0/0:54,0:51:47.92:0,48,802	0/0:54,0:52:99:0,138,2502	0/0:18,0:17:42.12:0,42,727	0/1:25,0:20:28.33:28,0,62	0/0:22,0:22:62.87:0,63,1090	1/1:29,4:29:13.29:125,13,0	0/1:34,0:29:10.61:11,0,16	0/0:30,0:29:78.22:0,78,1370	0/1:20,2:21:63.26:98,0,63	0/0:31,0:27:28.69:0,29,935	0/1:25,0:11:13.59:14,0,127	0/1:26,1:23:9.26:9,0,106	0/0:38,0:27:3.01:0,3,57	0/1:26,1:23:1.32:20,0,1	0/0:30,0:30:90.01:0,90,1510	0/0:53,0:52:99:0,141,2578	0/1:34,0:26:2.91:49,0,3	0/1:37,0:30:58.61:59,0,227	0/1:15,1:14:0.93:56,0,1	1/1:16,0:13:8.53:52,9,0
chr10	66042959	.	ACACTCACACT	A	344.86	PASS	AB=0.991;AC=13;AF=0.232;AN=56;BaseQRankSum=4.469;DP=922;FS=7.435;HRun=0;HaplotypeScore=271.4764;InbreedingCoeff=0.1503;MQ=39.19;MQ0=50;MQRankSum=-0.922;QD=1.01;ReadPosRankSum=-3.280;VQSLOD=1.0909;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:46:99:0,120,2593	0/1:25,0:20:26.53:27,0,137	0/0:22,0:6:9:0,9,117	0/0:41,0:12:20.51:0,21,277	0/0:25,0:25:57.15:0,57,1458	0/1:23,0:20:11.52:18,0,12	0/1:48,0:39:85.59:86,0,243	0/0:53,0:36:99:0,99,1231	0/0:52,0:49:51.06:0,51,1018	0/0:61,0:56:99:0,145,3294	0/0:19,0:18:39.11:0,39,772	0/1:25,0:20:0.97:1,0,187	0/0:24,0:24:66.65:0,67,1569	0/1:34,0:29:10.04:35,0,10	0/1:35,0:30:4.77:5,0,81	0/0:28,0:27:72.22:0,72,2417	0/1:21,0:20:4.97:5,0,153	0/0:34,0:29:60.79:0,61,1416	0/0:28,0:15:27.70:0,28,362	0/1:28,0:24:1.17:20,0,1	1/1:40,0:29:7.33:49,7,0	1/1:26,1:23:3.01:50,3,0	0/0:27,0:27:78.26:0,78,1790	0/0:58,0:57:99:0,153,3817	0/1:33,3:28:44.65:196,0,45	0/0:35,0:29:21.59:0,22,470	0/0:14,0:13:19.60:0,20,253	0/0:12,0:9:8.96:0,9,109
chr10	66042961	.	ACT	A	642.78	PASS	AB=0.903;AC=14;AF=0.250;AN=56;BaseQRankSum=6.212;DP=936;FS=0.000;HRun=0;HaplotypeScore=198.8684;InbreedingCoeff=-0.0088;MQ=38.88;MQ0=53;MQRankSum=-5.484;QD=1.76;ReadPosRankSum=-0.553;VQSLOD=2.2610;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:45:99:0,120,2182	0/1:23,2:20:37.21:37,0,169	0/0:22,0:5:6.02:0,6,110	0/0:42,0:12:23.75:0,24,299	0/0:23,0:23:56.92:0,57,988	0/0:17,7:21:4.14:0,4,28	0/1:38,12:41:99:163,0,152	0/0:51,0:35:99:0,99,1490	0/0:53,0:50:50.96:0,51,812	0/0:64,0:58:99:0,155,2669	0/0:18,0:17:39.12:0,39,718	0/1:22,3:19:39.65:40,0,131	0/0:25,0:25:69.18:0,69,1149	1/1:32,2:29:14.52:161,15,0	0/1:33,3:31:33.20:33,0,56	0/0:29,0:27:72.25:0,72,1378	0/1:20,1:20:71.70:95,0,72	0/1:32,2:29:24.60:25,0,970	0/0:27,1:15:29.51:0,30,338	0/0:28,3:27:9.57:0,10,75	0/1:34,5:28:8.94:9,0,41	0/0:30,0:26:5.79:0,6,68	0/0:26,0:26:78.27:0,78,1493	0/0:59,0:58:99:0,156,2646	0/1:32,6:28:39.64:40,0,110	0/1:32,4:30:38.06:38,0,421	0/1:13,1:13:41.97:67,0,42	1/1:10,3:10:8.06:97,8,0
chr10	66042969	.	TCA	T	90.22	PASS	AB=0.983;AC=7;AF=0.125;AN=56;BaseQRankSum=3.618;DP=976;FS=0.873;HRun=0;HaplotypeScore=216.6904;InbreedingCoeff=-0.0178;MQ=38.62;MQ0=52;MQRankSum=-4.951;QD=0.48;ReadPosRankSum=-3.872;VQSLOD=2.1177;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,111,1834	0/1:27,1:23:19.44:19,0,179	0/0:22,0:4:12.04:0,12,196	0/0:44,0:8:16.71:0,17,213	0/0:23,0:23:57.08:0,57,982	0/0:24,0:21:5.91:0,6,70	0/0:58,0:49:30.49:0,30,373	0/1:37,1:27:55.37:109,0,55	0/0:49,2:48:50.78:0,51,795	0/0:64,0:57:99:0,147,2291	0/0:18,0:18:27.08:0,27,422	0/1:26,0:20:24.19:24,0,116	0/0:23,0:23:60.17:0,60,977	1/1:34,0:29:0.01:2,0,0	0/0:35,0:31:9.68:0,10,99	0/0:33,0:31:75.43:0,75,1212	0/1:20,0:19:40.93:41,0,65	0/0:32,0:32:68.57:0,69,1024	0/0:33,0:20:36.29:0,36,476	0/1:41,1:36:8.65:9,0,130	0/0:42,0:31:8.01:0,8,119	0/0:37,0:33:5.82:0,6,92	0/0:29,0:29:84.27:0,84,1399	0/0:59,0:58:99:0,150,2471	0/0:45,0:35:27.27:0,27,317	0/0:36,0:30:15.29:0,15,416	0/0:15,0:14:11.83:0,12,91	0/0:13,0:9:6.79:0,7,46
chr10	66042985	.	ACACT	A	227.14	PASS	AB=0.875;AC=2;AF=0.036;AN=56;BaseQRankSum=4.990;DP=1008;FS=3.182;HRun=0;HaplotypeScore=232.6240;InbreedingCoeff=-0.0474;MQ=37.82;MQ0=47;MQRankSum=-5.094;QD=5.68;ReadPosRankSum=-4.422;VQSLOD=2.0002;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,120,2918	0/0:37,0:32:33.72:0,34,627	0/0:30,0:6:18.06:0,18,445	0/0:69,0:16:22.33:0,22,506	0/0:25,0:25:69.01:0,69,1744	0/0:22,0:19:8.85:0,9,117	0/0:60,0:52:34.36:0,34,833	0/1:10,5:10:59.34:301,0,59	0/0:45,0:42:48.12:0,48,1156	0/0:61,0:54:99:0,112,3263	0/0:21,0:21:17.80:0,18,445	0/1:25,0:19:2.84:3,0,250	0/0:23,0:23:66.23:0,66,1795	0/0:22,0:18:3.17:0,3,81	0/0:35,0:32:13.57:0,14,328	0/0:43,0:39:73.45:0,73,1984	0/0:16,0:15:8.23:0,8,226	0/0:41,0:37:20.06:0,20,1870	0/0:34,0:19:39.60:0,40,834	0/0:49,0:42:23.17:0,23,619	0/0:47,0:35:20.80:0,21,500	0/0:39,0:35:15.03:0,15,294	0/0:28,0:28:81.26:0,81,2097	0/0:61,0:59:99:0,159,4196	0/0:52,0:44:30.39:0,30,549	0/0:35,0:29:60.05:0,60,1334	0/0:13,0:12:12.03:0,12,250	0/0:16,0:11:9.03:0,9,254
chr10	66043009	.	T	TCTCA	1672.47	PASS	AB=0.904;AC=14;AF=0.250;AN=56;BaseQRankSum=4.202;DP=915;FS=1.227;HRun=0;HaplotypeScore=214.0844;InbreedingCoeff=0.3232;MQ=39.44;MQ0=37;MQRankSum=-5.168;QD=6.97;ReadPosRankSum=-1.490;VQSLOD=2.4812;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:96.30:0,96,1636	0/1:27,1:26:47.67:231,0,48	0/0:34,0:11:24.97:0,25,350	0/0:83,0:26:20.54:0,21,382	0/0:26,0:26:68.96:0,69,1085	1/1:14,2:14:1.49:4,1,0	0/1:43,0:39:5.10:5,0,185	0/0:27,0:24:60.18:0,60,997	1/1:38,0:36:19.29:264,19,0	0/0:49,0:43:99:0,107,1497	0/0:18,0:18:5.80:0,6,96	0/0:12,3:10:2.96:0,3,53	0/0:30,0:30:69.13:0,69,1137	0/1:9,4:10:0:0,0,0	1/1:19,4:20:1.58:5,2,0	0/0:50,0:47:62.10:0,62,785	0/1:13,0:12:44.94:45,0,50	1/1:12,14:22:24.25:1105,24,0	0/0:27,2:15:30.08:0,30,489	0/0:41,5:39:28.23:0,28,319	0/0:44,1:34:24.06:0,24,369	0/0:31,2:30:15.05:0,15,249	0/0:25,0:25:69.21:0,69,1170	0/0:57,0:55:99:0,117,2006	0/0:49,0:42:1.04:0,1,417	0/1:26,1:23:98.67:99,0,357	0/1:8,2:11:62.54:64,0,63	0/0:16,2:12:9.03:0,9,129
chr10	66043013	.	ACT	A	151.28	PASS	AB=1.000;AC=4;AF=0.071;AN=56;BaseQRankSum=5.941;DP=878;FS=8.641;HRun=0;HaplotypeScore=190.4136;InbreedingCoeff=0.4426;MQ=41.79;MQ0=25;MQRankSum=-3.765;QD=2.65;ReadPosRankSum=-2.696;VQSLOD=1.6028;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,105,1842	0/0:28,0:26:8.08:0,8,285	0/0:34,0:13:29.82:0,30,473	0/0:86,0:28:24.67:0,25,420	0/0:29,0:29:78.18:0,78,1297	0/0:14,0:12:2.92:0,3,19	0/0:39,0:35:13.79:0,14,256	0/0:31,0:29:78.24:0,78,1349	1/1:21,12:31:16.78:233,17,0	0/0:46,0:40:99:0,111,1893	0/0:16,0:16:5.74:0,6,99	0/0:12,0:9:3.01:0,3,54	0/0:31,0:31:81.71:0,82,1390	0/1:13,0:10:0:0,0,0	0/0:19,0:17:0.57:0,1,1	0/0:56,0:53:67.34:0,67,1021	0/1:11,0:11:18.42:18,0,46	0/0:24,0:20:38.15:0,38,331	0/0:23,0:14:33.58:0,34,570	0/0:45,0:38:25.95:0,26,402	0/0:40,2:33:23.65:0,24,429	0/0:33,0:30:14.79:0,15,270	0/0:25,0:25:72.25:0,72,1312	0/0:54,0:52:99:0,123,2203	0/0:48,0:42:19.25:0,19,484	0/0:24,0:21:38.84:0,39,557	0/0:11,0:10:5.40:0,5,94	0/0:13,0:7:9.03:0,9,164
chr10	66043019	.	ACTCACT	A	280.69	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=6.372;DP=824;FS=5.346;HRun=0;HaplotypeScore=213.0777;InbreedingCoeff=0.4098;MQ=47.24;MQ0=15;MQRankSum=-6.125;QD=2.99;ReadPosRankSum=-2.224;VQSLOD=1.4218;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,111,3132	0/0:25,0:23:21.48:0,21,284	0/0:40,0:20:17.74:0,18,745	0/0:89,0:32:25.21:0,25,552	0/0:26,0:26:75.24:0,75,2102	1/1:10,0:8:0.07:0,0,0	0/0:32,0:31:16.80:0,17,367	0/0:30,0:29:81.19:0,81,2073	1/1:18,11:28:24:364,24,0	0/0:47,0:41:76.53:0,77,1091	0/0:17,0:17:2.71:0,3,25	0/0:10,0:8:5.97:0,6,58	0/0:27,0:27:81.25:0,81,2331	0/0:11,0:8:0:0,0,0	0/1:16,0:14:0.01:0,0,0	0/0:55,0:52:20.98:0,21,258	0/0:9,0:9:1.98:0,2,71	0/1:27,0:23:3.19:3,0,551	0/0:19,0:13:24.52:0,25,472	0/0:39,0:33:4.20:0,4,326	0/0:37,0:34:23.46:0,23,618	0/0:27,0:25:14.77:0,15,360	0/0:25,0:25:72.25:0,72,2336	0/0:49,0:48:99:0,126,3810	0/0:39,0:37:32.21:0,32,693	0/0:22,0:18:36:0,36,709	0/1:11,0:10:18:18,0,124	0/0:12,0:7:9.03:0,9,261
chr10	66043023	.	ACT	A	140.91	PASS	AB=0.992;AC=7;AF=0.125;AN=56;BaseQRankSum=5.472;DP=819;FS=8.588;HRun=0;HaplotypeScore=181.8865;InbreedingCoeff=0.3970;MQ=47.40;MQ0=13;MQRankSum=-2.575;QD=1.04;ReadPosRankSum=-2.586;VQSLOD=1.2095;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,2:43:42.76:0,43,1738	0/1:24,0:23:0.64:1,0,88	0/0:44,0:21:32.18:0,32,590	0/0:88,1:29:4.03:0,4,270	0/0:28,0:28:75.20:0,75,1217	0/0:8,0:6:2.97:0,3,38	0/0:31,0:30:14.27:0,14,191	0/0:34,0:33:87.26:0,87,1408	1/1:25,3:26:23.92:228,24,0	0/0:44,0:38:78.44:0,78,874	0/1:17,0:17:0:0,0,0	0/0:10,0:8:2.92:0,3,17	0/0:28,0:28:78.26:0,78,1324	0/1:10,0:7:0:0,0,0	0/1:15,0:13:0:0,0,0	0/0:52,0:49:32.21:0,32,250	0/0:8,0:8:2.30:0,2,17	0/0:27,1:24:52.34:0,52,716	0/0:14,0:9:12.50:0,12,171	0/1:40,0:33:12.41:12,0,93	0/0:38,0:35:13.20:0,13,252	0/0:27,0:25:11.73:0,12,151	0/0:25,0:25:72.22:0,72,1170	0/0:50,0:49:99:0,114,1866	0/0:38,0:35:22.73:0,23,360	0/0:22,0:18:29.77:0,30,362	0/0:10,0:9:7.65:0,8,119	0/0:12,0:7:9.02:0,9,103
chr10	66043025	.	T	TCA	134.94	PASS	AB=0.993;AC=7;AF=0.125;AN=56;BaseQRankSum=7.046;DP=814;FS=0.000;HRun=0;HaplotypeScore=182.7198;InbreedingCoeff=0.3663;MQ=47.59;MQ0=12;MQRankSum=-5.367;QD=0.94;ReadPosRankSum=-0.023;VQSLOD=2.5720;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,120,1692	0/0:22,2:22:6.37:0,6,156	0/0:47,0:22:42.73:0,43,555	0/0:87,0:28:16.30:0,16,336	0/0:29,0:29:84.17:0,84,1172	0/0:9,0:7:1.64:0,2,5	0/0:31,0:30:17.39:0,17,214	0/0:33,0:32:93.20:0,93,1317	1/1:27,0:26:21.85:177,22,0	0/0:42,0:36:1.96:0,2,631	0/1:16,0:16:0:0,0,0	0/0:10,0:8:5.89:0,6,37	0/0:31,0:31:78.26:0,78,1178	0/1:10,0:7:0:0,0,0	0/1:12,0:10:0.01:0,0,0	0/1:50,0:47:21.94:22,0,113	0/0:8,0:8:1.69:0,2,34	0/1:28,1:25:46.23:46,0,293	0/0:14,0:9:15.04:0,15,210	0/0:36,2:31:22.14:0,22,191	0/0:36,0:33:20.30:0,20,290	0/0:25,1:24:11.71:0,12,137	0/0:25,0:25:72.23:0,72,1077	0/0:53,0:52:99:0,129,1803	0/0:36,1:35:23.75:0,24,344	0/0:21,0:17:24.34:0,24,325	0/0:10,0:9:11.81:0,12,125	0/0:12,0:7:9.03:0,9,137
chr10	66043027	.	T	TCA	970.09	PASS	AB=0.869;AC=7;AF=0.125;AN=56;BaseQRankSum=6.511;DP=794;FS=11.079;HRun=0;HaplotypeScore=177.7942;InbreedingCoeff=0.2520;MQ=48.13;MQ0=12;MQRankSum=-5.492;QD=6.42;ReadPosRankSum=-0.097;VQSLOD=2.4116;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,126,1763	0/0:24,0:22:15.19:0,15,175	0/0:49,0:23:40.50:0,40,578	0/0:85,0:28:13.71:0,14,309	0/0:30,0:30:80.79:0,81,1129	0/0:9,0:7:2.80:0,3,22	0/0:28,0:27:11.99:0,12,154	0/0:32,0:31:90.25:0,90,1306	1/1:25,0:25:0.05:27,0,0	0/1:32,10:36:99:633,0,274	0/1:9,7:16:0:0,0,0	0/0:10,0:8:2.90:0,3,16	0/0:35,0:35:99:0,99,1342	0/1:8,0:5:0:0,0,0	0/1:12,0:10:0.01:0,0,0	0/1:39,9:45:13.93:407,0,14	0/0:8,0:8:1.69:0,2,35	0/0:28,0:24:7.90:0,8,572	0/0:9,0:5:8.39:0,8,137	0/0:37,0:30:7.02:0,7,90	0/0:36,0:33:17.23:0,17,242	0/0:24,0:22:11.72:0,12,138	0/0:25,0:25:72.18:0,72,1070	0/0:54,0:53:99:0,135,1856	0/0:36,0:34:23.75:0,24,346	0/0:19,0:15:26.72:0,27,302	0/0:10,0:9:8.86:0,9,109	0/0:12,0:7:9.03:0,9,129
chr10	66043039	.	TCACACTCACACTCA	T	2343.69	PASS	AB=0.907;AC=22;AF=0.393;AN=56;BaseQRankSum=7.354;DP=723;FS=5.340;HRun=0;HaplotypeScore=235.6160;InbreedingCoeff=0.4060;MQ=49.37;MQ0=16;MQRankSum=-6.356;QD=7.49;ReadPosRankSum=-1.291;VQSLOD=1.5762;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:42:99:0,117,4745	1/1:13,0:14:12.31:178,12,0	0/0:43,0:21:38.56:0,39,994	0/0:73,0:22:24.24:0,24,443	0/0:31,0:30:81.26:0,81,3398	1/1:6,0:6:0.50:3,0,0	1/1:18,0:16:2.97:20,3,0	0/0:35,0:33:87.26:0,87,2267	0/0:20,0:20:18.92:0,19,154	1/1:34,2:28:21.96:1120,22,0	1/1:12,1:15:3.48:111,3,0	0/0:8,0:7:3.01:0,3,69	0/0:40,0:40:99:0,111,4906	0/0:5,0:4:0:0,0,0	0/1:8,0:10:0.11:0,0,0	0/1:23,30:50:1.31:531,0,1	0/1:9,0:11:5.77:6,0,42	0/0:27,0:25:28.55:0,29,832	0/0:5,0:2:2.94:0,3,18	1/1:22,0:20:10.79:64,11,0	0/1:42,0:35:8.97:84,0,9	0/1:17,0:16:0:0,0,0	0/0:21,0:21:57.19:0,57,2312	0/0:54,0:55:99:0,135,5311	0/1:27,0:26:10.80:62,0,11	0/1:16,0:13:99:145,0,138	0/1:8,0:7:7.73:39,0,8	1/1:8,0:5:9.03:146,9,0
chr10	66043041	.	ACACT	A	1705.52	PASS	AB=0.907;AC=25;AF=0.463;AN=54;BaseQRankSum=8.736;DP=708;FS=2.548;HRun=0;HaplotypeScore=165.2719;InbreedingCoeff=0.5531;MQ=49.23;MQ0=21;MQRankSum=-6.068;QD=5.76;ReadPosRankSum=-1.461;VQSLOD=2.6341;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:41:99:0,117,3010	1/1:14,0:13:12.34:179,12,0	0/0:44,0:21:39.25:0,39,986	0/0:72,0:22:11.64:0,12,406	0/0:31,0:30:81.26:0,81,2049	0/0:6,0:6:2.88:0,3,20	1/1:17,0:13:2.97:20,3,0	0/0:35,0:30:87.26:0,87,2033	0/0:21,0:21:19.70:0,20,147	1/1:25,11:28:15.93:685,16,0	1/1:14,2:15:2.92:17,3,0	./.	0/0:39,0:39:99:0,111,2878	0/1:4,0:4:0:0,0,0	0/0:9,0:8:0:0,0,0	0/1:43,9:49:4.02:272,0,4	1/1:11,0:11:6.58:69,7,0	0/0:27,0:25:36.20:0,36,787	1/1:5,0:2:3.01:33,3,0	1/1:22,2:20:8.91:44,9,0	1/1:44,0:33:6.22:93,6,0	0/1:12,2:13:0:0,0,0	0/0:21,0:21:57.19:0,57,1429	0/0:57,0:56:99:0,138,3465	0/1:19,6:23:10.97:62,0,11	0/1:17,0:13:28.57:193,0,29	1/1:7,1:7:3.90:58,4,0	1/1:8,1:6:11.25:155,11,0
chr10	66043043	.	ACT	A	686.26	PASS	AB=0.918;AC=23;AF=0.411;AN=56;BaseQRankSum=9.108;DP=708;FS=1.944;HRun=0;HaplotypeScore=153.2036;InbreedingCoeff=0.4540;MQ=49.05;MQ0=23;MQRankSum=-6.125;QD=2.40;ReadPosRankSum=-0.321;VQSLOD=2.4541;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:41:99:0,112,2184	1/1:10,5:14:11.88:125,12,0	0/0:44,0:21:36.42:0,36,722	0/0:71,0:22:16.19:0,16,346	0/0:30,0:29:81.24:0,81,1467	0/0:6,0:6:2.91:0,3,18	1/1:15,2:12:2.97:20,3,0	0/0:37,0:30:87.24:0,87,1546	0/0:22,0:22:16.69:0,17,119	0/1:36,0:28:87.64:162,0,88	0/0:17,0:16:2.04:0,2,6	0/0:7,0:5:2.92:0,3,17	0/0:38,0:38:99:0,111,2078	0/1:4,0:4:0:0,0,0	0/1:9,0:8:0.02:0,0,0	0/1:50,0:47:15.09:72,0,15	1/1:9,2:11:4.01:18,4,0	0/0:28,0:27:45.69:0,46,654	1/1:4,0:2:2.37:8,2,0	0/1:17,7:20:13.35:19,0,13	1/1:44,4:33:7.20:47,7,0	0/1:7,5:11:0:0,0,0	0/0:21,0:21:57.19:0,57,1073	0/0:57,0:56:99:0,138,2512	1/1:14,7:19:5.97:49,6,0	0/1:16,1:13:3.02:162,0,3	1/1:6,2:7:3.90:40,4,0	1/1:6,3:6:10.58:129,11,0
chr10	66043045	.	TCACA	T	1064.35	PASS	AB=0.892;AC=22;AF=0.407;AN=54;BaseQRankSum=10.611;DP=696;FS=15.361;HRun=0;HaplotypeScore=160.5519;InbreedingCoeff=0.5330;MQ=49.29;MQ0=23;MQRankSum=-7.301;QD=4.11;ReadPosRankSum=-1.559;VQSLOD=1.7383;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:43:99:0,126,3048	1/1:13,0:14:14.28:170,14,0	0/0:41,1:21:37.14:0,37,859	0/0:69,0:21:7.39:0,7,338	0/0:29,0:28:78.25:0,78,2002	0/0:5,0:5:2.89:0,3,21	0/1:18,0:14:0.01:0,0,0	0/0:38,0:30:84.27:0,84,1866	0/0:24,0:24:9.13:0,9,86	1/1:35,0:26:26.90:528,27,0	0/0:17,0:16:4.19:0,4,20	0/0:5,1:4:2.94:0,3,18	0/0:38,0:38:99:0,114,2964	0/1:2,2:4:0:0,0,0	0/0:9,0:8:0:0,0,0	1/1:49,1:47:18.82:215,19,0	1/1:11,0:11:4.89:31,5,0	0/0:29,0:27:7.71:0,8,603	1/1:4,0:2:2.80:13,3,0	1/1:22,0:18:6.81:36,7,0	1/1:48,0:33:6.19:47,6,0	./.	0/0:21,0:21:60.19:0,60,1433	0/0:54,1:54:99:0,135,3443	1/1:20,0:18:2.44:21,2,0	0/1:16,2:13:59.04:59,0,90	0/1:4,0:4:13.07:32,0,13	1/1:7,0:6:0.67:79,1,0
chr10	66043049	.	ACT	A	35.73	PASS	AB=0.980;AC=16;AF=0.286;AN=56;BaseQRankSum=7.719;DP=688;FS=8.869;HRun=0;HaplotypeScore=149.3909;InbreedingCoeff=0.4019;MQ=49.57;MQ0=30;MQRankSum=-4.199;QD=0.16;ReadPosRankSum=-0.472;VQSLOD=2.3354;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:47:99:0,138,2242	1/1:14,0:14:4.61:12,5,0	0/0:38,0:19:13.05:0,13,459	0/0:64,1:21:5.60:0,6,203	0/0:29,0:28:78.24:0,78,1424	0/0:5,0:5:2.96:0,3,19	0/1:16,0:11:0:0,0,0	0/0:40,0:29:84.20:0,84,1398	0/0:23,1:24:11.01:0,11,46	0/0:33,0:25:19.37:0,19,305	0/0:18,0:17:9.02:0,9,113	0/0:6,0:4:3.01:0,3,52	0/0:41,0:41:99:0,123,2188	0/1:3,0:3:0:0,0,0	0/1:9,0:8:0.02:0,0,0	0/1:50,0:47:16.30:16,0,48	1/1:10,0:10:5.68:22,6,0	0/1:24,5:27:85.19:85,0,445	1/1:4,0:1:2.60:10,3,0	0/1:19,0:15:0.10:0,0,1	0/1:46,1:29:0.25:1,0,0	0/0:9,0:8:0:0,0,0	0/0:22,0:22:60.15:0,60,1049	0/0:55,0:54:99:0,135,2377	0/1:19,0:16:0.04:0,0,0	0/0:20,0:13:23.84:0,24,206	0/0:3,0:3:1.64:0,2,37	1/1:9,0:6:1.64:8,2,0
chr10	66043051	.	TCA	T	69.22	PASS	AB=0.991;AC=19;AF=0.352;AN=54;BaseQRankSum=7.168;DP=690;FS=21.918;HRun=0;HaplotypeScore=148.8892;InbreedingCoeff=0.1624;MQ=49.76;MQ0=31;MQRankSum=-4.567;QD=0.21;ReadPosRankSum=-1.445;VQSLOD=0.6271;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:48:99:0,123,2015	1/1:14,0:14:7.21:48,7,0	0/0:38,0:19:22.44:0,22,326	0/1:63,2:20:17:17,0,126	0/0:30,0:29:78.24:0,78,1276	0/1:4,0:4:0:0,0,0	0/1:15,1:11:0:0,0,0	0/0:43,0:32:72.67:0,73,1160	0/1:25,0:25:5.01:6,0,5	0/1:32,0:25:4.44:4,0,294	0/0:18,0:17:6.15:0,6,44	0/0:5,0:4:3.01:0,3,52	0/0:41,0:41:99:0,117,1970	0/1:3,0:3:0:0,0,0	0/1:9,0:8:0.02:0,0,0	0/1:50,0:47:21.49:21,0,58	0/0:10,0:10:7.42:0,7,30	0/1:31,0:27:23.55:24,0,330	1/1:5,0:1:3:29,3,0	1/1:18,0:14:1.25:3,1,0	0/0:47,1:30:1.93:0,2,17	./.	0/0:21,0:21:54.18:0,54,896	0/0:53,1:53:99:0,120,1976	0/1:19,0:16:0.15:0,0,0	0/1:21,0:13:33.44:33,0,99	0/1:3,0:3:5.30:5,0,43	0/1:8,0:6:1.32:6,0,1
chr10	66043057	.	ACACT	A	182.10	PASS	AB=0.996;AC=13;AF=0.232;AN=56;BaseQRankSum=7.014;DP=670;FS=1.718;HRun=0;HaplotypeScore=151.9164;InbreedingCoeff=0.3666;MQ=48.40;MQ0=38;MQRankSum=-5.345;QD=1.08;ReadPosRankSum=-0.605;VQSLOD=2.3601;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:50:99:0,144,3041	1/1:13,0:13:1.60:19,2,0	0/0:33,0:14:17.90:0,18,213	0/1:54,0:14:3.14:3,0,65	0/0:30,0:29:78.22:0,78,1813	0/0:3,0:3:2.99:0,3,51	0/1:13,0:8:0:0,0,0	0/0:46,0:30:50.27:0,50,1446	1/1:15,11:26:12.08:172,12,0	0/0:33,0:27:57.19:0,57,744	0/0:21,0:20:23.81:0,24,364	0/0:4,0:3:3.01:0,3,72	0/0:39,0:39:99:0,114,2875	0/1:3,0:3:0:0,0,0	0/0:8,0:7:0:0,0,0	0/0:51,0:48:1.43:0,1,77	1/1:9,0:10:9.19:70,9,0	0/1:27,0:24:15.49:15,0,325	0/1:8,0:3:13.08:26,0,13	1/1:12,0:8:1.61:5,2,0	0/0:51,0:32:2.39:0,2,24	0/0:7,1:7:0:0,0,0	0/0:20,0:20:57.13:0,57,1231	0/0:56,0:55:99:0,135,3051	0/0:16,0:13:0:0,0,0	0/0:16,0:9:1.73:0,2,318	0/0:3,0:3:5.27:0,5,86	0/0:7,0:6:9.19:0,9,61
chr10	66043087	.	TCA	T	137.55	PASS	AB=0.845;AC=12;AF=0.286;AN=42;BaseQRankSum=5.444;DP=618;FS=0.000;HRun=0;HaplotypeScore=90.6551;InbreedingCoeff=0.3042;MQ=43.67;MQ0=48;MQRankSum=-3.649;QD=0.85;ReadPosRankSum=-0.299;VQSLOD=1.5324;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,126,2025	./.	0/0:26,1:6:15.05:0,15,252	0/0:55,0:12:19.45:0,19,308	0/0:36,0:34:93.30:0,93,1457	./.	./.	0/0:40,1:20:31.52:0,32,501	0/1:25,1:26:9.25:9,0,9	0/0:34,0:28:81.27:0,81,1305	0/0:13,0:13:27.09:0,27,455	1/1:5,2:3:3.01:39,3,0	0/0:45,0:45:99:0,126,2039	./.	0/1:9,2:5:0.02:0,0,0	0/0:39,0:39:30.68:0,31,460	0/1:6,4:10:29.42:63,0,29	0/1:16,0:13:9.17:9,0,57	1/1:13,1:4:3.01:33,3,0	./.	0/1:33,19:36:0:0,0,0	./.	0/0:24,0:24:57.16:0,57,887	0/0:54,1:55:99:0,129,2091	./.	0/1:13,4:8:91.44:94,0,91	1/1:2,0:2:2.60:10,3,0	0/0:4,0:4:2.37:0,2,8
chr10	66043137	.	ACTCT	A	279.29	PASS	AB=0.817;AC=15;AF=0.288;AN=52;BaseQRankSum=5.920;DP=612;FS=0.000;HRun=0;HaplotypeScore=118.5721;InbreedingCoeff=0.6069;MQ=50.93;MQ0=28;MQRankSum=-5.276;QD=5.82;ReadPosRankSum=-2.679;VQSLOD=1.2528;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,118,3017	0/0:4,0:4:8.91:0,9,98	0/0:36,0:13:33.06:0,33,680	0/0:66,0:16:39.38:0,39,665	0/0:33,0:31:90.31:0,90,2290	1/1:1,0:1:3:28,3,0	1/1:5,3:8:6.49:89,6,0	0/0:45,0:43:99:0,129,3167	0/0:21,0:21:20.70:0,21,377	0/0:63,0:60:99:0,178,4536	0/0:16,0:16:45.15:0,45,1226	0/1:5,0:1:0:0,0,0	0/0:34,0:33:99:0,99,2525	0/0:4,0:3:5.14:0,5,37	0/0:7,0:4:5.94:0,6,112	0/0:43,0:43:90.15:0,90,2426	1/1:7,1:6:5.89:61,6,0	0/0:15,0:12:20.84:0,21,384	1/1:7,0:2:2.96:19,3,0	0/0:5,1:6:1.81:0,2,6	./.	0/1:1,1:2:0:1,0,0	0/0:27,0:26:78.25:0,78,1957	0/0:67,0:67:99:0,178,4604	1/1:1,2:3:3.48:47,3,0	0/1:8,3:10:99:107,0,274	./.	1/1:2,1:3:6.74:73,7,0
chr10	66043143	.	ACACT	A	114.05	PASS	AB=0.949;AC=10;AF=0.185;AN=54;BaseQRankSum=5.111;DP=632;FS=0.000;HRun=0;HaplotypeScore=131.9364;InbreedingCoeff=0.2396;MQ=53.16;MQ0=24;MQRankSum=-3.618;QD=2.24;ReadPosRankSum=-1.945;VQSLOD=2.2589;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,117,2566	0/0:6,0:6:7.27:0,7,86	0/0:37,0:14:32.01:0,32,505	0/0:64,0:19:38.95:0,39,708	0/0:38,0:37:99:0,105,2481	1/1:2,0:2:0.47:1,0,0	1/1:10,0:10:6.11:50,6,0	0/0:45,0:43:99:0,120,2692	0/0:19,0:19:20.60:0,21,333	0/0:70,0:67:99:0,193,4457	0/0:16,0:16:48.15:0,48,1117	0/1:6,0:1:0:0,0,0	0/0:37,0:36:99:0,102,2492	0/0:5,0:4:2.77:0,3,26	0/0:7,0:4:3.40:0,3,47	0/0:44,0:44:99:0,102,2559	0/1:5,4:7:25.59:59,0,26	0/0:12,1:10:0.31:0,0,395	0/0:11,0:3:2.49:0,2,6	0/0:7,0:7:1.34:0,1,6	0/0:24,3:19:0:0,0,0	0/1:2,0:2:0:1,0,0	0/0:26,0:25:52.24:0,52,1634	0/0:64,0:64:99:0,166,4227	0/1:4,0:4:7.14:26,0,7	0/1:14,0:14:66.51:67,0,155	./.	0/1:4,0:4:25.51:27,0,26
chr10	66043145	.	A	ACACT	1312.43	PASS	AB=0.689;AC=19;AF=0.352;AN=54;BaseQRankSum=6.448;DP=631;FS=4.924;HRun=0;HaplotypeScore=137.7072;InbreedingCoeff=0.6473;MQ=53.15;MQ0=21;MQRankSum=-4.179;QD=17.04;ReadPosRankSum=-1.901;VQSLOD=2.6863;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,117,2073	1/1:2,4:6:9.03:251,9,0	0/0:36,0:14:24.63:0,25,505	0/0:65,0:20:42.36:0,42,637	0/0:37,0:36:99:0,105,1858	1/1:1,1:2:3.01:83,3,0	1/1:9,1:10:6.37:148,6,0	0/0:47,0:43:99:0,120,2304	0/0:18,0:18:2.91:0,3,215	0/0:70,0:67:99:0,196,3519	0/0:17,0:17:51.15:0,51,922	0/1:1,4:1:0:0,0,0	0/0:37,0:36:99:0,102,1890	1/1:1,4:4:6.02:167,6,0	1/1:1,5:4:6.02:167,6,0	0/0:44,0:44:99:0,103,1899	1/1:10,0:8:8.39:101,8,0	0/0:12,1:10:20.94:0,21,337	0/0:10,0:3:3.47:0,3,25	0/1:2,5:7:0.20:1,0,0	0/0:20,4:17:0.47:0,0,1	0/0:2,1:3:0:0,0,1	0/0:26,0:25:55.24:0,55,1321	0/0:64,0:64:99:0,168,3277	1/1:3,1:4:6.01:98,6,0	0/1:14,1:15:95.11:261,0,95	./.	1/1:3,2:5:11.98:204,12,0
chr10	66043161	.	TTA	T	158.79	PASS	AB=0.955;AC=6;AF=0.107;AN=56;BaseQRankSum=6.402;DP=705;FS=1.997;HRun=0;HaplotypeScore=163.4820;InbreedingCoeff=0.1751;MQ=49.30;MQ0=25;MQRankSum=-5.427;QD=1.27;ReadPosRankSum=-1.635;VQSLOD=2.0872;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,105,2072	0/0:7,0:7:9.02:0,9,175	0/0:34,1:11:29.17:0,29,441	0/1:56,2:19:63.75:64,0,327	0/0:36,1:36:99:0,108,2098	0/0:8,0:8:9.02:0,9,140	0/0:16,0:12:7.02:0,7,130	0/0:47,0:42:99:0,118,1951	1/1:15,0:14:11.21:95,11,0	0/0:67,0:63:99:0,189,3570	0/0:15,0:15:45.15:0,45,891	0/0:13,0:8:9.50:0,10,151	0/0:42,0:42:99:0,120,2232	0/0:9,0:8:15.01:0,15,232	0/0:16,0:13:11.83:0,12,199	0/0:47,0:44:99:0,102,1939	0/1:14,0:11:4.22:4,0,332	0/0:18,0:14:23.14:0,23,574	0/1:17,2:5:48.55:107,0,49	0/0:10,0:9:4.30:0,4,86	0/0:28,2:26:18.06:0,18,349	0/0:10,0:9:12:0,12,242	0/0:26,0:25:72.09:0,72,1242	0/0:64,0:64:99:0,175,3268	0/0:8,0:8:2.90:0,3,217	0/1:18,1:18:4.18:4,0,735	0/0:5,0:4:9.03:0,9,155	0/0:11,0:11:24.13:0,24,534
chr10	66043175	.	ACT	A	160.72	PASS	AB=0.938;AC=9;AF=0.161;AN=56;BaseQRankSum=7.048;DP=802;FS=1.506;HRun=0;HaplotypeScore=190.6080;InbreedingCoeff=-0.0871;MQ=46.65;MQ0=39;MQRankSum=-3.069;QD=1.09;ReadPosRankSum=-3.832;VQSLOD=1.3207;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:96.09:0,96,1707	0/0:8,2:9:8.20:0,8,76	0/0:31,0:11:23.81:0,24,350	0/0:52,0:21:26.61:0,27,400	0/0:39,0:38:99:0,107,1714	0/0:10,0:9:5.35:0,5,38	0/0:32,0:25:10.68:0,11,143	0/0:41,0:33:70.66:0,71,894	1/1:15,0:14:0.10:1,0,0	0/0:69,0:67:99:0,157,3223	0/0:20,0:20:60.18:0,60,1083	0/0:17,0:12:10.77:0,11,100	0/0:41,0:41:98.58:0,99,1860	0/0:12,0:10:11.66:0,12,92	0/0:19,0:19:4.96:0,5,160	0/0:51,0:48:94.40:0,94,1621	0/1:13,5:14:71.90:72,0,161	0/0:23,0:19:3.79:0,4,303	0/1:23,1:6:36.49:75,0,36	0/1:14,0:12:9.54:10,0,26	0/0:48,4:40:27:0,27,272	0/1:18,0:17:10.35:10,0,106	0/0:25,0:24:69.17:0,69,1142	0/0:67,1:68:99:0,193,3446	0/1:14,0:13:2.66:3,0,122	0/1:26,2:24:28.84:29,0,414	0/0:5,1:5:9.02:0,9,98	0/1:14,2:15:81.67:82,0,221
chr10	66043177	.	T	TCA	4729.81	PASS	AB=0.700;AC=28;AF=0.500;AN=56;BaseQRankSum=9.326;DP=824;FS=11.260;HRun=0;HaplotypeScore=178.9031;InbreedingCoeff=0.3662;MQ=46.22;MQ0=40;MQRankSum=-7.746;QD=11.91;ReadPosRankSum=-2.173;VQSLOD=3.1452;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:87.15:0,87,1040	1/1:7,3:10:6.23:63,6,0	0/0:28,0:11:14.98:0,15,168	0/0:52,0:22:17.91:0,18,253	0/0:36,0:35:86.83:0,87,1046	1/1:2,8:10:5.65:62,6,0	0/1:18,14:25:4.21:264,0,4	0/1:20,22:35:11.01:701,0,11	1/1:10,0:15:1.19:3,1,0	0/0:67,1:66:93.29:0,93,1934	0/0:20,0:20:57.16:0,57,701	0/1:5,11:13:10.12:173,0,10	0/0:40,0:40:99:0,102,1240	1/1:6,6:12:8.91:150,9,0	1/1:7,11:20:3.49:189,3,0	0/0:51,0:48:78.22:0,78,972	1/1:9,9:15:15.82:341,16,0	1/1:7,16:19:9.64:620,10,0	0/1:26,1:7:17.30:68,0,17	0/1:7,4:14:9.95:44,0,10	0/1:26,27:45:12.08:374,0,12	1/1:5,8:18:2.19:234,2,0	0/0:24,0:23:57.17:0,57,711	0/0:71,0:71:99:0,180,2192	0/1:6,10:15:1.59:217,0,2	0/1:12,16:26:12.44:699,0,12	1/1:1,4:5:9.03:138,9,0	1/1:4,6:15:9.65:389,10,0
chr10	66043305	.	T	TCA	4017.81	PASS	AB=0.996;AC=20;AF=0.357;AN=56;BaseQRankSum=-1.151;DP=881;FS=11.939;HRun=0;HaplotypeScore=191.4262;InbreedingCoeff=0.1147;MQ=38.08;MQ0=92;MQRankSum=-1.790;QD=9.61;ReadPosRankSum=-0.690;VQSLOD=2.4636;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:47:99:0,105,1308	0/0:12,0:12:6.59:0,7,34	0/0:12,0:3:6.02:0,6,72	0/0:37,0:4:1.60:0,2,9	0/0:29,0:26:60.17:0,60,749	0/0:18,0:16:0.25:0,0,1	0/0:33,0:20:0.45:0,0,1	1/1:39,3:19:4.01:385,4,0	0/1:13,0:10:29.30:64,0,29	1/1:32,26:43:94.30:1520,94,0	1/1:5,4:8:15.04:219,15,0	0/1:36,0:31:23.41:48,0,23	0/0:50,0:49:99:0,114,1472	0/1:35,0:34:3.44:17,0,3	0/0:39,0:37:2.67:0,3,39	1/1:18,30:45:83.82:1343,84,0	0/1:23,0:21:49.69:50,0,121	0/1:8,0:7:29.66:30,0,68	0/1:24,0:14:11.46:11,0,148	0/1:21,0:18:58.86:62,0,59	0/0:61,0:44:17.77:0,18,200	1/1:20,0:19:5.62:59,6,0	0/0:19,0:18:42.12:0,42,530	0/0:56,0:56:99:0,132,1661	0/0:45,0:36:11.60:0,12,153	0/1:43,2:36:99:164,0,335	0/1:18,0:17:30.36:30,0,104	0/1:9,0:8:15.75:16,0,177
chr10	66043313	.	ACT	A	385.04	PASS	AB=0.954;AC=16;AF=0.286;AN=56;BaseQRankSum=6.526;DP=888;FS=14.835;HRun=0;HaplotypeScore=194.7456;InbreedingCoeff=-0.0494;MQ=38.71;MQ0=92;MQRankSum=-5.817;QD=0.99;ReadPosRankSum=-2.847;VQSLOD=1.3378;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:48:99:0,126,2128	0/1:11,0:11:0.47:0,0,59	0/0:19,0:4:1.68:0,2,79	0/1:41,0:10:13.34:13,0,85	0/0:27,0:24:63.16:0,63,1069	0/0:12,4:14:0.38:0,0,1	0/1:35,0:21:0.09:0,0,0	0/1:42,0:21:42.03:42,0,379	0/1:10,0:8:24.19:24,0,27	0/0:56,0:44:37.21:0,37,905	0/1:8,0:7:33.47:33,0,75	0/1:30,8:33:16.75:17,0,53	0/0:44,0:43:99:0,123,2080	1/1:30,5:33:4.17:48,4,0	0/0:36,9:41:3.35:0,3,56	0/0:46,0:45:67.83:0,68,820	0/1:20,3:20:82.20:82,0,164	0/0:7,0:7:9:0,9,133	0/1:24,1:12:45.93:46,0,272	0/1:24,0:20:2.75:3,0,80	0/0:63,0:45:18.98:0,19,215	1/1:22,2:22:5.50:40,6,0	0/0:18,0:17:48.10:0,48,791	0/0:60,0:60:99:0,159,2472	0/0:39,1:33:15.54:0,16,125	0/1:46,4:39:99:156,0,568	0/1:17,3:19:26.35:26,0,117	0/0:9,0:8:18.06:0,18,306
chr10	66043319	.	ACACACT	A	1371.76	PASS	AB=0.964;AC=14;AF=0.250;AN=56;BaseQRankSum=9.582;DP=905;FS=6.380;HRun=0;HaplotypeScore=218.8526;InbreedingCoeff=-0.0171;MQ=39.56;MQ0=84;MQRankSum=-6.774;QD=3.61;ReadPosRankSum=-2.112;VQSLOD=1.8794;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:49:99:0,115,2533	0/1:9,1:10:51.86:56,0,52	0/0:28,0:8:16.49:0,16,225	0/0:53,0:14:24.37:0,24,375	0/0:26,0:23:54.17:0,54,1279	1/1:14,0:12:3.92:15,4,0	0/0:35,0:20:0.51:0,1,2	0/0:36,0:20:47.93:0,48,867	0/0:7,0:5:2.51:0,3,19	0/0:52,0:42:99:0,100,1935	0/0:7,0:7:12.04:0,12,294	0/1:37,2:34:20.17:99,0,20	0/0:42,0:41:99:0,102,2410	1/1:37,2:36:3.03:95,3,0	0/0:47,1:45:1.99:0,2,11	0/0:45,0:43:96.13:0,96,2033	0/1:25,0:22:26.54:140,0,27	0/0:8,0:7:8.97:0,9,74	0/1:18,1:10:71.54:102,0,72	0/1:23,0:19:25.67:28,0,26	0/1:68,4:54:17.28:26,0,17	0/1:24,0:22:0.09:0,0,0	0/0:19,0:18:45.13:0,45,935	0/0:59,0:59:99:0,138,3294	0/1:39,3:35:10.10:90,0,10	0/1:48,3:39:99:722,0,205	0/1:21,0:20:31.50:143,0,32	0/0:9,0:8:1.74:0,2,56
chr10	66043323	.	ACT	A	754.83	PASS	AB=0.974;AC=19;AF=0.339;AN=56;BaseQRankSum=9.105;DP=929;FS=1.849;HRun=0;HaplotypeScore=197.2157;InbreedingCoeff=-0.0229;MQ=40.30;MQ0=76;MQRankSum=-7.884;QD=1.55;ReadPosRankSum=-4.743;VQSLOD=1.6071;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:48:99:0,123,2121	0/1:9,0:9:41.39:41,0,42	0/1:33,0:9:10.17:10,0,126	0/0:59,0:17:24.12:0,24,368	0/0:24,0:23:59.86:0,60,1065	0/1:15,0:13:0.01:0,0,0	1/1:38,0:23:1.93:12,2,0	0/0:33,0:20:54.13:0,54,893	0/1:11,0:7:13.54:20,0,14	0/0:50,0:40:96.63:0,97,1778	0/0:7,0:7:12.03:0,12,199	0/1:41,1:37:6.53:93,0,7	0/0:40,0:39:99:0,111,1975	1/1:41,3:40:5.61:65,6,0	0/0:50,2:48:2.72:0,3,9	0/0:46,0:44:99:0,105,1768	0/1:27,0:24:66.94:74,0,67	0/0:7,0:6:8.98:0,9,102	0/1:23,0:12:40.46:40,0,141	0/1:20,2:19:2.26:2,0,47	0/1:71,0:57:27.59:50,0,28	1/1:26,4:28:2.81:25,3,0	0/0:17,0:16:45.14:0,45,808	0/0:59,0:59:99:0,150,2651	0/1:31,6:30:8.96:9,0,41	0/1:49,3:41:99:337,0,293	0/1:21,1:21:13.09:127,0,13	0/1:10,0:9:0.57:1,0,61
chr10	66043325	.	T	TCACA	1850.83	PASS	AB=0.967;AC=20;AF=0.357;AN=56;BaseQRankSum=9.594;DP=947;FS=1.102;HRun=0;HaplotypeScore=218.4939;InbreedingCoeff=0.1146;MQ=39.99;MQ0=76;MQRankSum=-7.562;QD=3.95;ReadPosRankSum=-4.788;VQSLOD=1.7036;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:44:99:0,107,1957	0/1:10,0:10:43.09:82,0,43	0/0:38,0:11:17.34:0,17,239	0/0:60,0:17:31:0,31,430	0/0:24,0:23:56.86:0,57,989	1/1:16,0:14:2.07:13,2,0	1/1:39,1:26:1.99:17,2,0	0/0:33,0:19:52.44:0,52,873	0/1:12,0:8:11.22:27,0,11	0/0:49,0:38:96.28:0,96,1686	0/0:7,0:7:12.04:0,12,213	1/1:42,2:39:0.76:136,1,0	0/0:39,0:38:99:0,108,1835	1/1:39,4:40:4.59:177,5,0	0/0:49,4:49:1.12:0,1,5	0/0:48,0:46:99:0,100,1620	0/1:27,0:24:48.75:153,0,49	0/0:6,0:6:8.85:0,9,58	0/1:28,0:14:51.97:153,0,52	0/1:19,2:19:11.72:12,0,38	0/1:73,0:59:6.18:79,0,6	1/1:29,2:29:5.14:35,5,0	0/0:17,0:16:42.14:0,42,744	0/0:58,0:58:99:0,144,2497	0/1:34,2:30:0.09:83,0,0	0/1:52,1:42:99:815,0,164	0/1:18,4:22:18.79:222,0,19	0/1:10,0:9:8.60:9,0,28
chr10	66043327	.	A	ACT	194.55	PASS	AB=0.981;AC=13;AF=0.232;AN=56;BaseQRankSum=6.590;DP=1017;FS=0.774;HRun=0;HaplotypeScore=226.4522;InbreedingCoeff=-0.0955;MQ=39.47;MQ0=83;MQRankSum=-5.763;QD=0.41;ReadPosRankSum=-4.362;VQSLOD=1.0620;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:46:99:0,114,1697	0/1:11,1:11:9.68:10,0,57	0/0:39,0:11:4.38:0,4,281	0/0:67,0:18:34.01:0,34,423	0/0:25,0:24:60.19:0,60,894	0/0:17,0:15:0.73:0,1,2	0/1:45,0:28:0.67:30,0,1	0/0:32,0:22:60.18:0,60,864	0/1:11,0:7:6.85:7,0,14	0/0:47,0:36:99:0,101,1492	0/0:7,0:7:12.04:0,12,183	0/1:55,0:50:25.11:25,0,108	0/0:37,0:37:99:0,108,1630	0/1:48,2:46:5.65:6,0,26	0/0:58,0:53:5.32:0,5,57	0/0:49,0:47:99:0,105,1578	0/1:28,1:26:27.71:28,0,226	0/0:6,0:6:9.03:0,9,123	0/1:34,1:15:50.22:50,0,313	0/0:22,0:17:7.43:0,7,73	0/1:77,1:63:26.91:27,0,258	1/1:34,3:35:0.41:2,0,0	0/0:16,0:15:42.14:0,42,642	0/0:59,0:59:99:0,150,2239	0/1:40,0:34:2.26:2,0,181	0/1:60,1:50:89.75:90,0,624	0/1:27,0:27:54.16:54,0,129	0/0:9,0:8:17.98:0,18,235
chr10	66043351	.	TCTCA	T	654.42	PASS	AB=0.973;AC=10;AF=0.179;AN=56;BaseQRankSum=8.282;DP=1496;FS=0.000;HRun=0;HaplotypeScore=360.2523;InbreedingCoeff=-0.0974;MQ=37.76;MQ0=78;MQRankSum=-5.153;QD=1.42;ReadPosRankSum=1.751;VQSLOD=1.2570;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,107,2535	0/0:28,0:26:46.31:0,46,933	0/0:54,0:19:30.54:0,31,676	0/0:97,0:32:54.63:0,55,1143	0/0:29,0:29:78.25:0,78,1775	0/0:26,3:25:10.64:0,11,175	0/0:71,4:57:34.79:0,35,854	0/0:38,0:33:87.25:0,87,1903	0/0:36,0:31:30.09:0,30,657	0/1:38,0:33:99:139,0,142	1/1:6,0:6:0.57:2,1,0	0/1:74,3:71:66.84:67,0,726	0/0:34,0:34:93.30:0,93,2188	0/0:82,2:77:9.17:0,9,445	0/0:99,2:95:28.83:0,29,505	0/1:47,0:47:35.64:36,0,326	0/1:50,1:44:99:134,0,1083	0/0:15,0:13:20.98:0,21,377	0/1:78,1:32:96.49:96,0,1222	0/0:39,1:36:14.03:0,14,945	0/0:116,6:102:61.27:0,61,1272	0/0:60,1:54:33.83:0,34,790	0/0:22,0:22:57.20:0,57,1445	0/0:59,0:59:99:0,144,3552	0/0:67,0:57:43.19:0,43,961	0/1:86,3:78:99:242,0,2888	0/1:46,2:48:49.53:50,0,1322	0/1:24,2:25:24.02:24,0,1191
chr10	66043359	.	ACTCT	A	1693.98	PASS	AB=0.996;AC=14;AF=0.250;AN=56;BaseQRankSum=7.632;DP=1586;FS=1.224;HRun=0;HaplotypeScore=380.1379;InbreedingCoeff=0.0070;MQ=38.18;MQ0=87;MQRankSum=-4.265;QD=2.14;ReadPosRankSum=1.643;VQSLOD=1.1276;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,120,2763	0/0:31,0:29:58.91:0,59,1077	0/1:52,0:21:9.55:10,0,633	0/0:92,0:30:58.68:0,59,1233	0/0:27,0:27:78.16:0,78,1804	0/0:33,0:28:0.51:0,1,215	0/1:85,0:64:13.47:13,0,990	0/0:37,0:32:87.23:0,87,1880	0/0:39,1:35:32.60:0,33,764	1/1:36,0:31:32.24:704,32,0	1/1:6,0:6:6:52,6,0	0/1:79,0:72:59:59,0,741	0/0:38,0:38:99:0,110,2409	0/1:87,0:79:9.90:10,0,443	0/1:107,0:100:46.78:47,0,489	0/1:49,0:49:99:463,0,105	0/1:52,2:46:99:161,0,1248	0/0:19,0:17:35.98:0,36,646	0/1:83,0:37:99:122,0,1247	0/0:44,0:39:39.75:0,40,1079	0/0:129,6:116:69.27:0,69,1568	0/0:68,0:57:37:0,37,894	0/0:21,0:21:60.18:0,60,1557	0/0:58,0:58:99:0,156,3807	0/0:74,0:63:27.20:0,27,1126	0/1:97,0:83:99:191,0,3184	0/1:56,0:55:22.35:22,0,1408	0/0:30,0:28:17.76:0,18,1435
chr10	66043361	.	TCTCA	T	3692.30	PASS	AB=0.945;AC=16;AF=0.286;AN=56;BaseQRankSum=4.325;DP=1597;FS=9.413;HRun=0;HaplotypeScore=376.0230;InbreedingCoeff=0.0901;MQ=38.68;MQ0=84;MQRankSum=-2.960;QD=4.39;ReadPosRankSum=-0.270;VQSLOD=0.7667;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,116,2649	0/0:31,0:29:58.94:0,59,1023	0/0:52,0:21:7.84:0,8,587	0/0:97,0:32:58.49:0,58,1154	0/0:25,0:25:66.20:0,66,1539	0/1:33,0:28:21.32:21,0,206	0/1:77,9:65:77.16:77,0,990	0/0:35,0:31:72.24:0,72,1631	0/0:40,0:35:30.10:0,30,729	1/1:11,24:30:87.27:1441,87,0	1/1:0,6:6:6.02:102,6,0	0/1:77,2:72:68.02:68,0,609	0/0:40,0:40:99:0,111,2420	0/1:79,7:78:27.49:27,0,405	0/1:98,10:100:99:162,0,443	1/1:18,31:49:68.70:1079,69,0	0/1:53,1:46:99:124,0,1151	0/0:21,0:19:39.97:0,40,748	0/1:67,16:40:99:229,0,1104	0/0:42,4:40:45.15:0,45,967	0/0:126,11:117:71.38:0,71,1499	0/1:69,1:59:4.02:4,0,800	0/0:21,0:21:57.20:0,57,1444	0/0:59,0:59:99:0,150,3495	0/0:72,3:64:2.73:0,3,930	0/1:90,6:82:99:291,0,2791	0/1:55,1:55:65.35:65,0,1202	0/0:31,0:29:45.50:0,45,1318
chr10	66043371	.	TCTCA	T	686.27	PASS	AB=0.975;AC=11;AF=0.196;AN=56;BaseQRankSum=6.471;DP=1650;FS=13.920;HRun=0;HaplotypeScore=393.6337;InbreedingCoeff=0.0914;MQ=38.20;MQ0=74;MQRankSum=-5.012;QD=1.21;ReadPosRankSum=-0.133;VQSLOD=0.5740;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,120,2826	0/0:33,0:31:59.08:0,59,851	0/0:53,0:23:4.85:0,5,491	0/0:96,0:30:62.45:0,62,959	0/0:24,0:24:60.19:0,60,1457	0/0:34,2:32:14.64:0,15,169	0/0:101,0:77:18.58:0,19,776	0/0:36,0:32:75.23:0,75,1458	0/0:45,0:39:29.42:0,29,730	1/1:35,0:30:14.47:373,14,0	1/1:6,0:6:0.58:2,1,0	0/0:81,0:74:7.61:0,8,422	0/0:42,0:42:99:0,120,2701	0/1:83,3:78:10.94:11,0,282	0/1:105,3:101:66.42:66,0,308	0/1:40,4:44:28.23:147,0,28	0/1:51,0:43:48.61:49,0,1039	0/0:21,0:19:39.60:0,40,796	0/1:82,0:47:44.82:45,0,1518	0/0:51,1:47:39.09:0,39,952	0/0:145,0:123:67.16:0,67,1351	0/0:77,0:67:38.78:0,39,667	0/0:23,0:23:66.20:0,66,1540	0/0:58,0:58:99:0,147,3480	0/0:75,1:65:47.13:0,47,696	0/1:99,1:85:26.08:26,0,2233	0/1:55,1:55:99:112,0,842	0/0:33,1:32:70.56:0,71,985
chr10	66043437	.	ACT	A	791.94	PASS	AB=0.920;AC=10;AF=0.179;AN=56;BaseQRankSum=9.682;DP=1243;FS=2.328;HRun=0;HaplotypeScore=282.5841;InbreedingCoeff=0.0135;MQ=51.88;MQ0=28;MQRankSum=-5.891;QD=1.70;ReadPosRankSum=-3.140;VQSLOD=1.3572;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,126,2251	0/1:19,3:21:99:131,0,571	0/0:30,0:21:46.10:0,46,812	0/0:57,0:31:24.32:0,24,1122	0/0:35,0:35:99:0,99,1698	0/0:35,1:35:23.44:0,23,400	0/0:70,5:69:60.41:0,60,1483	0/0:37,0:34:96.29:0,96,1672	1/1:14,29:40:11.05:371,11,0	0/0:50,0:49:99:0,139,2346	0/0:15,0:15:33.10:0,33,602	0/0:59,2:58:19.61:0,20,583	0/0:57,0:57:99:0,166,3082	0/1:54,2:55:18.36:18,0,405	0/1:74,2:74:7.20:7,0,569	0/0:42,1:43:89.62:0,90,1611	0/0:41,5:41:29.29:0,29,1117	0/1:13,7:20:99:230,0,133	0/0:22,0:17:8.38:0,8,572	0/0:32,4:34:47.19:0,47,704	0/1:88,4:87:15.24:15,0,952	0/1:43,2:42:45.30:45,0,266	0/0:19,0:19:57.18:0,57,1053	0/0:62,0:62:99:0,172,3153	0/1:40,5:40:67.36:67,0,317	0/1:67,1:61:53.18:53,0,1924	0/0:35,1:35:19.54:0,20,1254	0/0:13,0:13:26.44:0,26,424
chr10	66043439	.	TCA	T	297.52	PASS	AB=0.964;AC=6;AF=0.107;AN=56;BaseQRankSum=8.798;DP=1209;FS=2.986;HRun=0;HaplotypeScore=275.4001;InbreedingCoeff=0.1962;MQ=52.47;MQ0=23;MQRankSum=-5.376;QD=1.64;ReadPosRankSum=-2.465;VQSLOD=1.6810;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,129,2246	0/1:20,1:20:54.77:55,0,542	0/0:29,0:21:54.78:0,55,857	0/0:53,1:31:56.98:0,57,1194	0/0:36,0:36:90.29:0,90,1586	0/0:33,0:32:4.66:0,5,360	0/0:70,0:66:74.69:0,75,1441	0/0:36,0:33:93.31:0,93,1648	1/1:42,0:39:30.21:233,30,0	0/0:51,0:50:99:0,135,2206	0/0:15,0:15:33.11:0,33,597	0/0:55,2:55:8.55:0,9,540	0/0:54,0:54:99:0,163,2948	0/1:52,2:54:21.29:21,0,422	0/0:66,4:69:14.58:0,15,572	0/0:44,0:44:95.67:0,96,1683	0/0:44,0:42:60.24:0,60,1190	0/1:20,0:20:84.28:104,0,84	0/0:20,0:17:37.94:0,38,634	0/0:35,3:36:41.78:0,42,654	0/0:86,0:85:45.78:0,46,997	0/1:40,3:40:11.85:12,0,254	0/0:20,0:20:57.15:0,57,972	0/0:63,0:63:99:0,172,3030	0/0:41,2:38:0.73:0,1,310	0/0:59,2:59:41.51:0,42,1811	0/0:32,0:31:54.49:0,54,1257	0/0:10,1:11:30.10:0,30,507
chr10	66043452	.	CACT	C	773.22	PASS	AB=0.737;AC=3;AF=0.054;AN=56;BaseQRankSum=5.292;DP=1095;FS=7.827;HRun=0;HaplotypeScore=252.1442;InbreedingCoeff=0.6627;MQ=65.31;MQ0=2;MQRankSum=-5.629;QD=14.59;ReadPosRankSum=-0.661;VQSLOD=1.7624;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,132,3006	0/0:15,0:15:37.41:0,37,784	0/0:26,0:24:66.22:0,66,1389	0/0:53,0:42:99:0,110,2373	0/0:33,0:33:93.32:0,93,2125	0/0:32,0:32:27.97:0,28,627	0/0:66,0:63:96.35:0,96,2218	0/0:39,0:36:99:0,102,2319	1/1:14,25:35:37.07:613,37,0	0/0:49,0:48:99:0,138,3203	0/0:16,0:16:42.14:0,42,957	0/0:46,0:45:33.60:0,34,774	0/0:57,0:57:99:0,169,3819	0/0:45,0:45:36.58:0,37,806	0/0:63,0:61:44.10:0,44,990	0/0:42,1:43:99:0,102,2367	0/0:39,0:38:81.95:0,82,1819	0/1:9,5:14:14.14:266,0,14	0/0:17,0:16:45.25:0,45,978	0/0:31,0:31:38.97:0,39,909	0/0:81,0:79:80.81:0,81,1874	0/0:38,0:37:29.90:0,30,620	0/0:22,0:22:63.22:0,63,1400	0/0:62,0:62:99:0,175,4054	0/0:32,0:31:23.52:0,24,501	0/0:49,0:48:99:0,117,2455	0/0:29,0:29:81.75:0,82,1844	0/0:13,0:13:36.12:0,36,801
chr10	66043455	.	T	TC	278.38	PASS	AB=0.813;AC=3;AF=0.054;AN=56;BaseQRankSum=4.952;DP=997;FS=0.000;HRun=1;HaplotypeScore=207.8430;InbreedingCoeff=0.7042;MQ=70.72;MQ0=1;MQRankSum=-4.905;QD=5.92;ReadPosRankSum=-1.799;VQSLOD=-0.4156;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,129,1798	0/0:14,0:14:33.11:0,33,461	0/0:28,0:26:66.21:0,66,877	0/0:53,0:46:99:0,130,1649	0/0:32,0:32:96.29:0,96,1322	0/0:28,0:28:26.88:0,27,377	0/0:55,0:54:96.30:0,96,1342	0/0:36,0:36:99:0,102,1426	1/1:27,7:31:23.57:258,24,0	0/0:47,0:47:99:0,138,1929	0/0:18,0:18:45.13:0,45,612	0/0:34,0:33:33.57:0,34,463	0/0:53,0:53:99:0,157,2180	0/0:33,0:33:39.58:0,40,528	0/0:55,0:53:42.14:0,42,588	0/0:45,0:45:99:0,102,1422	0/0:31,0:30:79.15:0,79,1092	0/1:10,3:13:7.98:125,0,8	0/0:15,0:15:42.14:0,42,585	0/0:33,0:33:39.13:0,39,545	0/0:63,0:61:80.19:0,80,1131	0/0:36,0:35:27.09:0,27,366	0/0:21,0:21:63.19:0,63,862	0/0:61,0:61:99:0,175,2408	0/0:25,0:25:22.73:0,23,332	0/0:48,0:48:99:0,112,1508	0/0:27,0:27:78.26:0,78,1090	0/0:13,0:13:36.12:0,36,498
chr10	66043605	.	C	CG	2720.22	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=3.215;DP=864;FS=4.490;HRun=0;HaplotypeScore=116.9403;InbreedingCoeff=0.9992;MQ=82.75;MQ0=0;MQRankSum=-0.760;QD=39.42;ReadPosRankSum=-1.190;VQSLOD=2.7737;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:68,0:68:99:0,199,2695	0/0:12,0:12:33.11:0,33,460	0/0:28,0:28:81.09:0,81,1048	0/0:26,0:26:77.96:0,78,965	0/0:22,0:22:66.22:0,66,921	0/0:23,0:23:69.17:0,69,924	0/0:37,0:37:99:0,111,1510	0/0:28,0:28:78.25:0,78,1059	0/0:36,0:36:99:0,108,1464	1/1:0,31:31:87.16:1326,87,0	1/1:0,12:12:36.12:575,36,0	0/0:22,0:22:63.21:0,63,881	0/0:38,0:38:99:0,111,1544	0/0:30,0:30:90.29:0,90,1237	0/0:35,0:35:99:0,102,1385	1/1:1,25:26:24.43:962,24,0	0/0:55,0:55:99:0,163,2229	0/0:23,0:23:63.17:0,63,858	0/0:20,0:20:57.18:0,57,768	0/0:26,0:25:63.17:0,63,857	0/0:60,0:60:99:0,180,2431	0/0:26,0:25:53.72:0,54,708	0/0:23,0:23:66.22:0,66,922	0/0:55,0:55:99:0,162,2186	0/0:30,0:30:87.14:0,87,1146	0/0:30,0:30:90.29:0,90,1243	0/0:25,0:25:75.23:0,75,1029	0/0:17,0:17:51.14:0,51,690
chr10	66043734	.	TC	T	722.97	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.287;DP=743;FS=0.000;HRun=2;HaplotypeScore=73.4382;InbreedingCoeff=0.9992;MQ=87.96;MQ0=0;MQRankSum=-0.461;QD=36.15;ReadPosRankSum=1.973;VQSLOD=4.2531;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,150,2371	0/0:11,0:11:30.10:0,30,479	0/0:23,0:23:69.12:0,69,1003	0/0:32,0:32:87.75:0,88,1334	0/0:17,0:17:51.17:0,51,809	0/0:18,0:18:54.18:0,54,863	0/0:28,0:28:84.26:0,84,1293	0/0:34,0:34:99:0,102,1590	0/0:28,0:28:84.17:0,84,1236	0/0:21,0:20:60.20:0,60,958	0/0:11,0:11:33.03:0,33,496	0/0:22,0:22:66.23:0,66,1055	0/0:33,0:33:99:0,99,1543	0/0:24,0:24:69.24:0,69,1098	0/0:29,0:29:87.30:0,87,1391	0/0:19,0:19:57.19:0,57,911	0/0:36,0:36:99:0,108,1700	1/1:1,19:20:60.17:818,60,0	0/0:27,0:27:81.28:0,81,1290	0/0:19,0:19:57.11:0,57,854	0/0:42,0:42:99:0,126,2014	0/0:24,0:24:72.16:0,72,1116	0/0:23,0:23:69.19:0,69,1050	0/0:44,0:44:99:0,132,2083	0/0:31,0:31:93.32:0,93,1478	0/0:32,0:32:90.25:0,90,1376	0/0:28,0:28:84.27:0,84,1310	0/0:17,0:17:51.17:0,51,814
chr10	66043884	.	GT	G	1497.64	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.201;DP=772;FS=7.883;HRun=2;HaplotypeScore=79.9193;InbreedingCoeff=0.9708;MQ=78.35;MQ0=0;MQRankSum=-4.592;QD=32.56;ReadPosRankSum=0.684;VQSLOD=3.1673;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,132,1857	0/0:3,0:3:9.03:0,9,134	0/0:41,0:41:99:0,102,1500	0/0:42,0:40:99:0,105,1522	0/0:20,0:20:60.20:0,60,892	0/0:24,0:24:69.21:0,69,993	0/0:33,0:33:96.30:0,96,1400	0/0:35,0:35:99:0,105,1538	1/1:1,30:31:81.26:1051,81,0	0/0:25,0:25:72.23:0,72,1048	0/0:17,0:17:48.11:0,48,650	0/0:15,0:15:45.14:0,45,654	0/0:24,0:24:72.22:0,72,1029	0/0:18,0:18:54.18:0,54,807	0/0:27,0:27:81.26:0,81,1177	0/0:23,0:23:60.19:0,60,879	0/0:32,0:32:96.27:0,96,1412	1/1:2,13:15:45.13:569,45,0	0/0:26,0:26:78.23:0,78,1120	0/0:25,0:25:66.21:0,66,950	0/0:40,0:40:99:0,114,1688	0/0:21,0:21:63.21:0,63,934	0/0:27,0:27:78.26:0,78,1168	0/0:36,0:36:99:0,108,1554	0/0:25,0:25:60.19:0,60,880	0/0:31,0:31:87.29:0,87,1296	0/0:41,0:41:99:0,123,1818	0/0:31,0:31:93.32:0,93,1392
chr10	66044332	.	G	GTC	8141.37	PASS	AB=0.769;AC=27;AF=0.482;AN=56;BaseQRankSum=9.716;DP=824;FS=2.853;HRun=0;HaplotypeScore=211.6061;InbreedingCoeff=0.8253;MQ=49.11;MQ0=17;MQRankSum=-8.199;QD=20.88;ReadPosRankSum=-1.676;VQSLOD=4.3748;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:45:99:0,118,1518	1/1:4,11:15:21.28:369,21,0	0/0:25,0:5:13.59:0,14,169	0/0:38,0:13:24.74:0,25,313	0/0:27,0:27:69.17:0,69,893	1/1:11,13:24:33.11:573,33,0	1/1:14,13:27:24.30:417,24,0	0/0:48,0:46:99:0,119,1530	0/0:21,0:21:57.19:0,57,777	0/0:24,0:24:65.65:0,66,816	0/0:28,0:28:72.22:0,72,961	1/1:12,22:34:63.19:1022,63,0	0/0:31,0:31:78.26:0,78,1068	1/1:13,20:33:51.02:739,51,0	1/1:10,22:31:31.65:563,32,0	0/0:36,0:36:99:0,102,1373	0/1:13,5:18:6.75:265,0,7	0/0:28,0:28:62.09:0,62,941	0/1:20,4:23:80.16:533,0,80	1/1:16,18:34:27.09:438,27,0	1/1:23,3:24:23.55:329,24,0	1/1:12,16:28:33.08:483,33,0	0/0:24,0:24:60.20:0,60,822	0/0:59,0:59:99:0,147,2046	0/1:12,11:24:0.79:236,0,1	1/1:16,20:36:59:1169,59,0	1/1:10,14:24:34.89:680,35,0	1/1:10,1:11:19.77:325,20,0
chr10	66044336	.	CTG	C	295.93	PASS	AB=0.946;AC=12;AF=0.214;AN=56;BaseQRankSum=5.026;DP=827;FS=1.447;HRun=0;HaplotypeScore=234.9565;InbreedingCoeff=-0.0456;MQ=49.83;MQ0=18;MQRankSum=2.207;QD=1.01;ReadPosRankSum=-9.364;VQSLOD=0.1249;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,125,2223	0/0:15,0:15:8.89:0,9,69	0/0:25,0:6:13.60:0,14,235	0/0:38,0:15:24.86:0,25,530	0/0:28,0:28:78.14:0,78,1317	0/0:22,2:24:6.54:0,7,88	0/1:25,2:27:11.85:12,0,110	0/0:50,0:47:99:0,132,2312	0/0:21,0:21:57.20:0,57,1085	0/0:25,0:24:71.50:0,72,1102	0/0:29,0:29:80.96:0,81,1387	0/1:32,1:33:6.26:6,0,176	0/0:29,0:29:84.25:0,84,1515	0/1:31,2:33:38.65:97,0,39	0/0:31,1:31:17.37:0,17,131	0/0:36,0:36:99:0,105,1896	0/1:15,2:17:17.06:59,0,17	0/0:27,0:27:74.86:0,75,1318	0/1:23,1:23:6.91:7,0,260	0/1:34,1:35:25.75:26,0,38	1/1:24,2:24:17.36:110,17,0	0/1:27,1:28:41.58:42,0,73	0/0:25,0:25:69.13:0,69,1266	0/0:60,0:60:99:0,157,2960	0/0:24,0:24:11.74:0,12,76	0/1:35,1:36:40.65:41,0,245	0/1:23,0:23:14.46:14,0,115	0/1:9,2:11:10.75:34,0,11
chr10	66044340	.	CTCTG	C	2411.55	PASS	AB=0.827;AC=18;AF=0.321;AN=56;BaseQRankSum=8.487;DP=820;FS=7.848;HRun=0;HaplotypeScore=249.3654;InbreedingCoeff=-0.0357;MQ=50.41;MQ0=13;MQRankSum=-8.751;QD=6.40;ReadPosRankSum=-2.587;VQSLOD=1.2787;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,118,1895	0/1:13,3:16:59.70:121,0,60	0/0:25,0:7:14.89:0,15,136	0/0:43,0:16:25.50:0,26,301	0/0:24,0:24:54.11:0,54,890	0/1:16,7:23:36.62:104,0,37	1/1:17,9:26:6.39:202,6,0	0/0:48,0:46:87:0,87,1081	0/0:20,0:20:54.12:0,54,1077	0/0:26,0:25:26.59:0,27,948	0/0:31,0:31:74.96:0,75,1230	0/1:25,6:31:76.72:352,0,77	0/0:28,0:28:75.21:0,75,1517	0/1:25,6:31:57.46:57,0,67	0/1:26,7:32:31.34:237,0,31	0/0:35,0:35:93.16:0,93,1722	0/1:16,1:17:25.99:42,0,26	0/0:27,0:27:54.03:0,54,947	0/1:17,3:19:11.74:251,0,12	1/1:23,13:36:15.11:198,15,0	1/1:27,0:24:2.74:13,3,0	0/1:21,5:26:22.44:60,0,22	0/0:26,0:26:60.08:0,60,1047	0/0:63,0:63:99:0,146,2893	0/1:14,9:24:41.85:49,0,42	0/1:22,13:34:96.20:569,0,96	0/1:16,5:21:72.41:282,0,72	0/1:10,1:11:13.48:45,0,13
chr10	66044344	.	G	GTC	5795.19	PASS	AB=0.785;AC=28;AF=0.500;AN=56;BaseQRankSum=16.809;DP=819;FS=11.614;HRun=0;HaplotypeScore=220.4566;InbreedingCoeff=0.8261;MQ=50.89;MQ0=16;MQRankSum=-11.632;QD=15.71;ReadPosRankSum=-0.241;VQSLOD=3.6540;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:47:99:0,127,1736	1/1:11,7:18:24.54:385,25,0	0/0:27,0:8:19.53:0,20,235	0/0:46,0:17:18.07:0,18,396	0/0:24,0:24:69.22:0,69,966	1/1:11,11:22:25.02:413,25,0	1/1:15,9:24:20.89:281,21,0	0/0:45,0:43:99:0,117,1569	0/0:22,0:22:62.90:0,63,792	0/0:29,0:28:80.46:0,80,1050	0/0:31,0:31:78.26:0,78,1107	1/1:10,20:30:54.59:892,55,0	0/0:27,0:27:78.26:0,78,1115	1/1:11,17:28:21.99:316,22,0	1/1:12,20:31:26.27:411,26,0	0/0:34,0:34:99:0,102,1456	0/1:9,5:14:6.21:53,0,6	0/0:25,0:26:57.15:0,57,768	0/1:16,4:19:58.40:395,0,58	1/1:24,12:35:19:270,19,0	1/1:22,5:24:3.72:15,4,0	1/1:14,13:27:16.93:221,17,0	0/0:27,0:27:69.13:0,69,925	0/0:63,0:63:99:0,154,2212	1/1:18,7:25:10.67:202,11,0	1/1:23,14:35:80.38:1124,80,0	1/1:13,11:24:57.18:748,57,0	1/1:4,1:5:6.75:69,7,0
chr10	66044346	.	CTG	C	1071.26	PASS	AB=0.953;AC=20;AF=0.357;AN=56;BaseQRankSum=13.286;DP=817;FS=25.467;HRun=0;HaplotypeScore=228.0239;InbreedingCoeff=0.2850;MQ=51.44;MQ0=16;MQRankSum=-7.214;QD=3.15;ReadPosRankSum=-2.256;VQSLOD=1.1886;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:48:99:0,134,2394	0/1:16,2:18:18.87:88,0,19	0/0:27,0:8:19.62:0,20,328	0/0:50,1:18:16:0,16,501	0/0:23,0:23:69.24:0,69,1266	1/1:22,1:23:1.12:89,1,0	0/1:21,1:22:7.18:38,0,7	0/0:44,0:42:99:0,117,2088	0/0:22,0:22:60.21:0,60,1156	0/0:29,0:28:74.06:0,74,1380	0/0:31,0:31:78.27:0,78,1474	0/1:27,3:30:6.06:109,0,6	0/0:26,0:26:78.27:0,78,1489	0/1:28,0:28:7.34:56,0,7	1/1:32,0:31:3.49:43,3,0	0/0:34,0:34:99:0,102,1933	0/1:14,0:14:0.31:0,0,29	0/0:22,2:25:60:0,60,1100	0/1:19,1:20:99:108,0,135	1/1:32,4:35:3.47:48,3,0	0/0:26,1:24:1.23:0,1,22	1/1:24,2:26:5.44:48,5,0	0/0:27,0:27:69.23:0,69,1284	0/0:62,0:62:99:0,160,2928	1/1:23,4:27:4.84:46,5,0	0/1:34,2:34:51.82:289,0,52	0/1:22,1:23:6.35:247,0,6	1/1:5,0:5:6.46:28,6,0
chr10	66044517	.	AT	A	14299.34	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=14.012;DP=741;FS=5.364;HRun=3;HaplotypeScore=76.2966;InbreedingCoeff=0.9994;MQ=72.91;MQ0=1;MQRankSum=-2.686;QD=38.44;ReadPosRankSum=1.611;VQSLOD=5.2719;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,120,1911	1/1:0,21:21:60.20:839,60,0	0/0:24,0:21:60.17:0,60,851	0/0:24,0:23:57.18:0,57,843	0/0:28,0:28:84.27:0,84,1319	1/1:0,23:23:57.19:796,57,0	1/1:0,34:34:99:1426,102,0	0/0:28,0:28:84.26:0,84,1285	0/0:33,0:33:99:0,99,1579	0/0:31,0:31:93.32:0,93,1470	0/0:30,0:30:87.28:0,87,1362	1/1:0,16:16:39.13:545,39,0	0/0:33,0:33:99:0,99,1569	1/1:0,27:27:75.25:1048,75,0	1/1:0,25:25:66.22:917,66,0	0/0:31,0:31:93.32:0,93,1485	1/1:0,23:23:63.21:881,63,0	0/0:7,0:7:21.07:0,21,322	1/1:1,23:24:52.54:943,53,0	1/1:0,31:31:90.30:1252,90,0	1/1:0,21:21:57.19:797,57,0	1/1:0,30:30:87.25:1187,87,0	0/0:29,0:29:87.30:0,87,1391	0/0:31,0:31:93.32:0,93,1482	1/1:0,21:21:54.18:755,54,0	1/1:0,28:28:84.24:1151,84,0	1/1:0,34:34:90.30:1258,90,0	1/1:0,14:14:36.12:503,36,0
chr10	66044641	.	C	CCCCTACAACGTAT	6958.21	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-3.769;DP=698;FS=1.908;HRun=0;HaplotypeScore=247.2587;InbreedingCoeff=0.9905;MQ=89.39;MQ0=0;MQRankSum=-8.753;QD=144.96;ReadPosRankSum=0.701;VQSLOD=5.0718;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,126,4685	0/0:11,0:11:24.08:0,24,925	0/0:28,0:28:69.05:0,69,1932	0/0:32,0:31:61.67:0,62,1966	0/0:31,0:31:84.29:0,84,3205	0/0:24,0:24:66.21:0,66,2465	0/0:28,0:28:63.20:0,63,2290	0/0:33,0:33:90.29:0,90,2908	1/1:16,20:37:99:5200,102,0	0/0:27,0:27:78.25:0,78,2834	0/0:19,0:19:51.14:0,51,1652	0/0:20,0:20:51.15:0,51,1745	0/0:22,0:22:57.20:0,57,2143	0/0:28,0:28:84.20:0,84,2825	0/0:21,0:21:63.19:0,63,2243	0/0:22,0:22:63.20:0,63,2369	0/0:23,0:23:60.21:0,60,2321	1/1:6,5:11:30.10:1758,30,0	0/0:17,0:17:36.10:0,36,1079	0/0:20,0:20:60.19:0,60,2241	0/0:35,0:35:99:0,102,3887	0/0:33,0:33:84.25:0,84,3124	0/0:25,0:25:69.24:0,69,2587	0/0:29,0:29:78.26:0,78,2770	0/0:27,0:27:75.26:0,75,2732	0/0:21,0:21:54.16:0,54,1838	0/0:23,0:23:69.24:0,69,2574	0/0:5,0:5:15.05:0,15,567
chr10	66044697	.	G	GGA	1713.31	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-4.823;DP=685;FS=5.167;HRun=0;HaplotypeScore=83.4454;InbreedingCoeff=0.9997;MQ=78.77;MQ0=1;MQRankSum=-1.756;QD=38.94;ReadPosRankSum=2.309;VQSLOD=5.9225;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,123,1585	0/0:16,0:16:39.10:0,39,490	0/0:17,0:17:36.12:0,36,465	0/0:15,0:16:39.12:0,39,498	0/0:30,0:30:84.26:0,84,1077	0/0:17,0:17:48.16:0,48,624	0/0:39,0:39:99:0,111,1399	0/0:27,0:27:75.24:0,75,973	1/1:5,23:27:69.24:1173,69,0	0/0:29,0:29:81.26:0,81,1053	0/0:25,0:25:60.17:0,60,764	0/0:14,0:14:42.12:0,42,531	0/0:25,0:25:72.22:0,72,919	0/0:31,0:31:78.24:0,78,1002	0/0:23,0:23:69.22:0,69,897	0/0:23,0:23:63.20:0,63,818	0/0:30,0:30:81.24:0,81,1035	1/1:2,14:16:39.13:662,39,0	0/0:17,0:17:45.14:0,45,572	0/0:23,0:23:63.20:0,63,814	0/0:40,0:40:99:0,102,1297	0/0:28,0:28:69.22:0,69,896	0/0:25,0:25:69.21:0,69,883	0/0:19,0:19:51.10:0,51,616	0/0:24,0:24:51.13:0,51,632	0/0:21,0:21:57.19:0,57,740	0/0:27,0:26:66.21:0,66,856	0/0:12,0:12:36.12:0,36,468
chr10	66046704	.	CT	C	2681.64	PASS	AB=0.682;AC=31;AF=0.554;AN=56;BaseQRankSum=1.886;DP=451;FS=2.704;HRun=14;HaplotypeScore=62.5697;InbreedingCoeff=0.7187;MQ=68.91;MQ0=9;MQRankSum=1.943;QD=9.90;ReadPosRankSum=3.280;VQSLOD=3.3077;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:74.72:0,75,643	1/1:2,9:12:16.87:109,17,0	0/0:20,0:13:8.94:0,9,72	0/0:12,0:9:7.64:0,8,61	0/0:20,0:21:20.69:0,21,190	1/1:3,12:15:29.74:205,30,0	1/1:4,6:10:17.82:123,18,0	0/0:7,0:22:43.89:0,44,212	1/1:2,7:9:14.86:103,15,0	0/0:13,0:14:32.85:0,33,285	0/0:12,0:14:26.73:0,27,221	1/1:2,4:6:8.90:62,9,0	0/0:13,1:14:16.15:0,16,237	1/1:4,2:6:2.95:21,3,0	1/1:4,12:16:17.79:123,18,0	0/0:10,0:11:23.91:0,24,207	1/1:11,23:34:15.68:396,16,0	1/1:9,18:26:8.68:249,9,0	0/1:8,9:16:26.19:127,0,26	1/1:5,17:22:50.37:340,50,0	0/1:7,2:10:16.92:36,0,17	1/1:3,3:6:8.84:58,9,0	0/0:7,0:7:15.02:0,15,139	0/0:6,0:6:9.01:0,9,84	1/1:9,11:20:31.21:210,31,0	0/1:9,14:22:2.79:240,0,3	1/1:3,15:18:17.23:261,17,0	1/1:7,11:16:22.93:229,23,0
chr10	66047051	.	CGT	C	750.86	PASS	AB=0.933;AC=28;AF=0.636;AN=44;BaseQRankSum=5.220;DP=538;FS=7.101;HRun=0;HaplotypeScore=73.3939;InbreedingCoeff=0.0358;MQ=67.36;MQ0=7;MQRankSum=-0.171;QD=2.07;ReadPosRankSum=3.259;VQSLOD=0.5003;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:30,1:29:23.19:23,0,166	./.	./.	./.	0/0:21,0:21:5.87:0,6,39	0/1:19,1:20:32.52:62,0,33	0/1:23,0:23:4.55:7,0,5	./.	0/1:23,2:26:14.10:14,0,181	1/1:14,0:17:5.68:28,6,0	./.	1/1:10,1:12:8.56:76,9,0	0/1:16,1:17:14.17:14,0,137	1/1:17,2:21:11.70:92,12,0	1/1:12,1:14:5.85:46,6,0	0/0:9,0:10:2.98:0,3,24	0/1:30,4:35:23.60:145,0,24	1/1:12,0:24:14.20:70,14,0	1/1:19,1:20:3.89:34,4,0	1/1:8,2:10:6.02:64,6,0	0/1:43,3:46:1.53:88,0,2	1/1:4,0:4:3:28,3,0	./.	0/0:49,0:48:48.02:0,48,561	0/1:13,1:14:20.24:20,0,52	1/1:21,0:21:2.79:14,3,0	0/0:10,0:9:2.99:0,3,24	1/1:3,2:5:6.02:64,6,0
chr10	66047148	.	C	CTGTG	10075.55	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-8.093;DP=606;FS=0.000;HRun=0;HaplotypeScore=119.9184;InbreedingCoeff=0.9473;MQ=65.64;MQ0=2;MQRankSum=-0.419;QD=34.27;ReadPosRankSum=1.140;VQSLOD=4.5512;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:87.27:0,87,1419	1/1:6,0:6:5.99:66,6,0	0/0:24,0:21:13.90:0,14,520	0/0:37,0:27:11.86:0,12,280	0/0:9,0:9:18.04:0,18,275	1/1:3,12:15:30.10:727,30,0	1/1:12,17:33:47.44:979,47,0	0/0:29,0:29:36.11:0,36,567	0/0:21,0:21:48.16:0,48,802	0/0:16,0:18:41.85:0,42,592	0/0:12,0:12:23.75:0,24,401	1/1:4,20:25:51.18:1249,51,0	0/0:17,0:18:42.14:0,42,680	1/1:10,7:22:32.32:622,32,0	1/1:4,14:19:39.13:964,39,0	0/0:24,0:25:66.22:0,66,1078	1/1:10,16:29:50.36:1075,50,0	0/0:21,0:21:16.67:0,17,549	1/1:7,7:14:21.06:450,21,0	1/1:2,3:7:8.76:161,9,0	1/1:29,32:69:69.95:1584,70,0	1/1:4,6:10:6.02:148,6,0	0/0:11,0:11:27.09:0,27,448	0/0:47,0:47:99:0,111,1798	1/1:3,4:7:17.65:381,18,0	1/1:8,10:21:48.09:930,48,0	1/1:2,4:7:14.79:308,15,0	1/1:4,5:10:18.06:430,18,0
chr10	66047322	.	GC	G	9667.11	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=3.955;DP=567;FS=2.906;HRun=8;HaplotypeScore=65.9709;InbreedingCoeff=0.9738;MQ=74.26;MQ0=1;MQRankSum=-1.143;QD=23.64;ReadPosRankSum=3.965;VQSLOD=5.6536;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:84.14:0,84,948	1/1:0,5:5:15.02:145,15,0	0/0:32,0:23:46.24:0,46,458	0/0:19,1:19:9.44:0,9,218	0/0:11,0:11:30.07:0,30,340	1/1:4,23:27:60.07:571,60,0	1/1:0,22:22:57.09:549,57,0	1/1:2,16:18:42.07:406,42,0	1/1:2,24:26:57.09:549,57,0	1/1:1,23:24:69.11:665,69,0	1/1:0,17:17:51.08:492,51,0	1/1:1,21:22:51.03:492,51,0	0/0:20,0:20:54.15:0,54,637	1/1:3,20:23:54.08:521,54,0	1/1:0,22:23:62.13:585,62,0	1/1:0,13:13:30.05:289,30,0	1/1:3,35:38:99:956,99,0	1/1:2,17:19:42.07:406,42,0	1/1:0,12:12:36.06:348,36,0	1/1:1,9:10:27.04:261,27,0	1/1:6,37:43:81.12:782,81,0	1/1:0,9:9:27.04:260,27,0	0/0:16,1:17:16.17:0,16,474	0/0:23,0:23:63.18:0,63,749	1/1:2,15:17:39.06:376,39,0	1/1:4,22:26:66.10:637,66,0	1/1:0,12:12:30.05:290,30,0	1/1:0,3:3:9.01:87,9,0
chr10	66048209	.	A	AGGAG	7321.21	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=11.250;DP=505;FS=4.089;HRun=0;HaplotypeScore=125.2300;InbreedingCoeff=0.9530;MQ=53.09;MQ0=10;MQRankSum=-2.078;QD=28.16;ReadPosRankSum=0.168;VQSLOD=4.6672;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:35:32.52:0,33,996	1/1:2,3:5:12.03:208,12,0	0/0:16,0:11:23.55:0,24,218	0/0:14,0:6:9.01:0,9,106	0/0:28,0:28:51.94:0,52,836	1/1:13,2:15:32.90:455,33,0	1/1:11,3:14:26.08:340,26,0	0/0:24,0:23:44.56:0,45,408	1/1:12,2:14:21.03:362,21,0	0/0:23,0:22:60.12:0,60,883	0/0:15,0:15:36.09:0,36,535	1/1:6,0:5:3:26,3,0	0/0:22,0:22:57.81:0,58,710	1/1:8,0:8:11.84:173,12,0	1/1:14,0:13:24.43:321,24,0	0/0:22,0:22:49.32:0,49,703	1/1:16,4:19:34.91:589,35,0	1/1:23,1:23:39.81:591,40,0	1/1:21,1:17:42.05:654,42,0	1/1:11,0:11:26.24:251,26,0	1/1:17,2:18:36.05:515,36,0	1/1:20,6:26:44.95:719,45,0	0/0:14,0:14:37.26:0,37,535	0/0:30,0:30:75.03:0,75,932	1/1:13,5:19:21.98:662,22,0	1/1:16,6:21:45:841,45,0	1/1:10,0:10:18.01:233,18,0	1/1:4,6:8:16.61:381,17,0
chr10	66048249	.	GGAAA	G	9060.34	PASS	AB=1.000;AC=34;AF=0.607;AN=56;BaseQRankSum=10.539;DP=556;FS=5.456;HRun=0;HaplotypeScore=200.6947;InbreedingCoeff=0.8150;MQ=51.65;MQ0=7;MQRankSum=-3.945;QD=29.51;ReadPosRankSum=1.388;VQSLOD=4.2562;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:32,0:32:3.01:3,0,1480	1/1:2,7:9:18.12:280,18,0	0/0:34,0:14:36.90:0,37,632	0/0:34,0:12:33.11:0,33,761	0/0:22,0:22:7.97:0,8,1045	1/1:2,13:14:36.12:654,36,0	1/1:5,12:17:42.07:685,42,0	0/0:16,0:16:36.08:0,36,730	0/1:21,0:21:28.85:174,0,29	0/0:33,0:33:72.81:0,73,1909	0/0:15,0:15:32.74:0,33,832	1/1:4,12:16:12.91:382,13,0	0/0:22,0:22:32.14:0,32,1238	1/1:2,4:6:3.66:127,4,0	1/1:6,16:21:23.18:616,23,0	0/0:19,0:19:45.24:0,45,830	1/1:2,16:18:42.11:713,42,0	1/1:17,0:17:15.08:346,15,0	1/1:1,13:13:36.12:652,36,0	1/1:6,10:16:31.51:609,32,0	1/1:2,15:17:36.12:635,36,0	1/1:7,18:25:46.60:774,47,0	0/0:20,0:20:10.23:0,10,972	0/0:34,0:34:84.28:0,84,2135	1/1:12,12:24:41.91:721,42,0	1/1:4,20:24:61.89:1120,62,0	1/1:2,9:11:23.92:487,24,0	1/1:3,0:3:6.01:82,6,0
chr10	66048250	.	GAA	G	1217.93	PASS	AB=0.946;AC=22;AF=0.393;AN=56;BaseQRankSum=9.386;DP=558;FS=4.791;HRun=3;HaplotypeScore=208.7280;InbreedingCoeff=0.2176;MQ=51.52;MQ0=7;MQRankSum=-5.356;QD=4.70;ReadPosRankSum=3.146;VQSLOD=0.1261;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,2:32:7.12:0,7,1278	1/1:9,0:9:14.20:58,14,0	0/0:35,0:14:33.45:0,33,549	0/0:33,0:12:32.88:0,33,587	0/1:21,2:23:7.48:7,0,964	1/1:15,0:14:14.22:105,14,0	0/1:15,2:17:10.78:107,0,11	0/0:16,0:16:45.12:0,45,774	0/0:21,0:21:44.49:0,44,385	0/0:33,0:33:77.02:0,77,1587	0/0:13,1:14:33.62:0,34,694	0/1:16,0:16:39.13:39,0,65	0/0:20,2:22:1.41:0,1,1060	0/1:5,1:6:17.90:51,0,18	0/1:21,1:21:56.99:112,0,57	0/0:19,0:19:51.01:0,51,782	1/1:17,0:18:11.22:111,11,0	0/0:18,0:18:30.47:0,30,247	0/1:14,0:13:5.71:88,0,6	0/1:15,1:16:30.87:94,0,31	1/1:16,0:16:7.01:86,7,0	0/1:25,0:25:46.20:99,0,46	0/0:19,1:20:17.27:0,17,836	0/0:33,0:34:87.29:0,87,1642	0/1:21,2:24:37.60:150,0,38	1/1:24,0:24:17.94:158,18,0	0/1:11,0:11:10.66:64,0,11	1/1:2,1:3:8.57:74,9,0
chr10	66048256	.	AAGAG	A	5991.64	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=15.945;DP=573;FS=29.780;HRun=0;HaplotypeScore=210.7998;InbreedingCoeff=0.6422;MQ=51.42;MQ0=8;MQRankSum=-7.480;QD=20.88;ReadPosRankSum=4.756;VQSLOD=2.7776;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:51.45:0,51,1553	1/1:9,0:9:19.94:180,20,0	0/0:35,0:15:39.52:0,40,605	0/0:38,0:15:39.07:0,39,876	0/0:23,0:23:20.75:0,21,1011	1/1:15,0:14:36.11:424,36,0	1/1:18,0:18:2.81:354,3,0	0/0:16,0:16:39.11:0,39,792	1/1:10,15:25:43.42:436,43,0	0/0:31,0:31:52.33:0,52,1793	0/0:14,0:14:34.15:0,34,868	1/1:17,0:17:15.85:246,16,0	0/0:22,0:22:38.06:0,38,1145	0/1:7,0:7:11.02:65,0,11	1/1:22,0:21:46.66:446,47,0	0/0:18,0:18:14.88:0,15,850	1/1:20,0:20:5.94:376,6,0	1/1:3,17:20:36.04:622,36,0	0/1:15,0:14:3.92:320,0,4	1/1:15,0:15:37.36:356,37,0	0/1:19,0:19:4.90:325,0,5	0/1:21,0:21:16.54:443,0,17	0/0:21,0:21:24.63:0,25,995	0/0:33,0:33:84.25:0,84,2113	1/1:22,0:22:25.05:411,25,0	1/1:24,0:24:45.52:633,46,0	1/1:11,0:11:31.79:322,32,0	0/1:7,0:7:32.88:33,0,54
chr10	66048259	.	AGAG	A	2122.22	PASS	AB=0.878;AC=20;AF=0.357;AN=56;BaseQRankSum=12.571;DP=572;FS=93.084;HRun=0;HaplotypeScore=213.1291;InbreedingCoeff=-0.2060;MQ=51.45;MQ0=7;MQRankSum=-9.289;QD=6.35;ReadPosRankSum=3.356;VQSLOD=-0.5760;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,1:33:35.47:0,35,1698	0/1:8,1:9:18.75:36,0,19	0/0:36,0:15:42.11:0,42,768	0/0:38,0:16:38.96:0,39,906	0/1:17,3:20:80.22:80,0,1002	0/0:15,0:14:17.22:0,17,104	0/0:18,0:18:18:0,18,188	0/0:15,0:15:39.13:0,39,935	1/1:16,9:25:30.80:551,31,0	0/1:26,5:31:99:150,0,1704	0/0:12,1:13:4.26:0,4,782	0/1:14,4:18:71.65:172,0,72	0/1:19,1:20:12.83:13,0,1105	0/1:7,1:8:54.93:55,0,68	0/1:18,4:21:1.12:234,0,1	0/1:14,4:18:99:155,0,837	0/1:20,1:21:24.84:25,0,212	1/1:17,1:18:32.26:217,32,0	0/0:16,0:15:35.21:0,35,273	0/1:12,3:15:82.79:119,0,83	0/0:19,1:20:29.84:0,30,264	0/1:20,1:21:9.68:10,0,203	0/1:18,4:22:99:143,0,1049	0/0:34,0:34:84.29:0,84,2053	0/1:19,4:23:99:159,0,148	0/1:23,2:25:45.83:46,0,229	0/1:9,2:11:24.37:85,0,24	0/1:6,1:7:42.65:43,0,212
chr10	66053314	.	CA	C	13548.36	PASS	AB=0.519;AC=29;AF=0.518;AN=56;BaseQRankSum=19.290;DP=668;FS=15.067;HRun=1;HaplotypeScore=99.4048;InbreedingCoeff=0.9429;MQ=79.78;MQ0=0;MQRankSum=-3.932;QD=37.95;ReadPosRankSum=4.246;VQSLOD=3.5113;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,129,2062	1/1:0,11:11:30.10:419,30,0	0/0:15,0:15:42.12:0,42,639	0/0:23,0:23:63.12:0,63,906	0/0:21,0:21:60.20:0,60,951	1/1:1,23:24:72.20:983,72,0	1/1:0,41:41:96.32:1341,96,0	0/0:32,0:32:96.31:0,96,1474	0/0:29,0:29:87.27:0,87,1333	0/0:26,0:26:78.26:0,78,1229	0/0:25,0:25:66.23:0,66,1053	1/1:0,22:22:63.21:880,63,0	0/0:18,0:18:54.15:0,54,812	1/1:0,26:26:69.23:959,69,0	1/1:0,26:26:72.24:1006,72,0	0/0:16,0:16:48.15:0,48,741	1/1:0,36:36:90.30:1258,90,0	0/0:24,0:24:72.18:0,72,1093	1/1:0,26:26:71.98:975,72,0	1/1:0,17:17:51.17:709,51,0	1/1:0,46:46:99:1886,135,0	1/1:0,19:19:51.17:713,51,0	0/0:11,0:11:30.10:0,30,480	0/0:27,0:27:81.28:0,81,1295	1/1:0,21:21:57.04:796,57,0	0/1:1,13:14:5.84:493,0,6	1/1:0,19:19:54.18:752,54,0	1/1:0,9:9:27.09:377,27,0
chr10	66053635	.	C	CT	3562.66	PASS	AB=0.721;AC=28;AF=0.500;AN=56;BaseQRankSum=-7.763;DP=537;FS=0.000;HRun=13;HaplotypeScore=71.4244;InbreedingCoeff=0.5656;MQ=67.82;MQ0=0;MQRankSum=0.052;QD=10.70;ReadPosRankSum=-0.067;VQSLOD=3.0690;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:30:57.28:0,57,372	1/1:3,6:9:12.01:111,12,0	0/1:15,0:12:5.28:5,0,41	0/0:7,0:6:5.39:0,5,30	0/1:22,2:27:4.46:4,0,246	1/1:3,14:18:24.24:346,24,0	1/1:7,11:18:12.45:258,12,0	0/0:3,0:18:30.31:0,30,100	0/0:16,0:16:32.38:0,32,216	0/0:9,0:28:37.87:0,38,122	0/0:8,0:22:24.38:0,24,71	0/1:6,7:13:23.15:93,0,23	0/0:16,0:16:32.59:0,33,221	0/1:4,12:17:4.89:74,0,5	1/1:7,7:14:3.44:175,3,0	0/0:2,0:10:12.21:0,12,35	1/1:7,30:38:56.62:503,57,0	0/0:2,0:23:39.02:0,39,114	1/1:9,16:27:36.05:426,36,0	1/1:4,10:15:26.74:213,27,0	1/1:4,9:13:17.97:159,18,0	0/1:4,12:16:14.15:164,0,14	0/0:14,0:16:30.68:0,31,189	0/0:17,0:18:46.64:0,47,314	0/1:11,20:31:29.19:303,0,29	1/1:7,14:20:11.64:255,12,0	1/1:9,17:25:41.84:374,42,0	1/1:4,9:14:11.85:98,12,0
chr10	66056584	.	C	CAGAGAGAGAG	7661.98	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-2.761;DP=634;FS=0.689;HRun=0;HaplotypeScore=204.9522;InbreedingCoeff=0.7257;MQ=65.33;MQ0=6;MQRankSum=-2.504;QD=17.03;ReadPosRankSum=-3.717;VQSLOD=3.4391;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:29:14.63:137,15,0	1/1:12,0:11:9.03:276,9,0	0/0:34,0:19:3.01:0,3,39	0/0:37,0:22:2.76:0,3,38	0/0:10,0:13:9.02:0,9,182	1/1:28,0:27:11.85:396,12,0	1/1:20,0:20:11.90:522,12,0	1/1:31,0:31:23.39:335,23,0	0/0:12,0:21:24.08:0,24,538	1/1:28,0:28:15.45:84,15,0	1/1:11,0:16:6.02:134,6,0	1/1:15,9:26:18.06:838,18,0	0/0:24,0:25:20.81:0,21,527	1/1:20,2:23:12.04:538,12,0	1/1:27,3:30:9.50:446,10,0	1/1:12,0:24:24.27:122,24,0	1/1:26,2:28:36.12:1252,36,0	0/0:8,0:14:15.05:0,15,344	1/1:25,0:24:8.82:187,9,0	1/1:15,0:14:3.48:88,3,0	1/1:21,0:21:6.02:142,6,0	1/1:25,0:26:1.96:107,2,0	0/0:14,0:14:2.80:0,3,89	0/0:21,0:24:44.91:0,45,1152	1/1:13,0:11:6.02:142,6,0	1/1:24,0:24:43.68:1098,44,0	1/1:14,4:18:12.51:560,13,0	1/1:7,0:11:9.03:259,9,0
chr10	66056834	.	T	TC	14742.90	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-13.200;DP=753;FS=0.289;HRun=2;HaplotypeScore=67.2238;InbreedingCoeff=0.9999;MQ=78.48;MQ0=0;MQRankSum=-4.359;QD=34.45;ReadPosRankSum=5.784;VQSLOD=4.7870;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:90.28:0,90,1114	1/1:0,11:11:30.10:432,30,0	0/0:25,0:25:75.01:0,75,889	0/0:30,0:30:63.77:0,64,746	0/0:24,0:24:72.22:0,72,882	1/1:2,32:34:69.23:991,69,0	1/1:1,23:24:54.18:765,54,0	0/0:41,0:41:99:0,123,1493	1/1:1,27:28:63.21:898,63,0	0/0:35,0:35:99:0,99,1200	0/0:24,0:24:69.20:0,69,842	1/1:1,22:23:54.18:775,54,0	0/0:26,0:26:48.05:0,48,575	1/1:0,18:18:45.15:641,45,0	1/1:1,32:33:66.22:947,66,0	0/0:31,0:31:84.18:0,84,1006	1/1:4,25:29:57.19:821,57,0	1/1:3,33:36:81.27:1156,81,0	1/1:1,17:18:54.07:747,54,0	1/1:2,22:24:63.21:902,63,0	1/1:2,35:37:93.31:1332,93,0	1/1:0,26:26:75.25:1080,75,0	0/0:18,0:18:54.17:0,54,669	0/0:26,0:26:42.11:0,42,506	1/1:1,18:19:48.16:691,48,0	1/1:1,18:19:54.18:773,54,0	1/1:1,34:35:84.27:1190,84,0	1/1:0,14:14:42.14:605,42,0
chr10	66057338	.	AAT	A	14588.61	PASS	AB=0.514;AC=29;AF=0.518;AN=56;BaseQRankSum=14.938;DP=660;FS=1.642;HRun=0;HaplotypeScore=81.1320;InbreedingCoeff=0.9155;MQ=84.35;MQ0=1;MQRankSum=-1.819;QD=42.41;ReadPosRankSum=4.911;VQSLOD=6.8149;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,163,3202	1/1:0,8:8:14.93:244,15,0	0/0:19,0:19:54.18:0,54,1042	0/0:23,0:24:62.47:0,62,1151	0/0:18,0:18:54.19:0,54,1080	1/1:0,26:26:63.22:1028,63,0	1/1:0,23:23:60.20:978,60,0	0/0:22,0:22:63.21:0,63,1246	0/0:27,0:27:81.26:0,81,1579	0/0:23,0:23:69.21:0,69,1307	0/0:20,0:20:54.18:0,54,1062	1/1:0,33:33:90.31:1467,90,0	0/0:19,0:19:57.20:0,57,1119	1/1:0,26:26:72.25:1174,72,0	1/1:0,38:38:99:1614,99,0	0/0:22,0:22:66.23:0,66,1341	1/1:0,34:34:96.28:1537,96,0	0/0:25,0:25:72.25:0,72,1418	1/1:0,19:19:57.19:904,57,0	1/1:1,18:18:51.17:813,51,0	1/1:0,53:53:99:2173,135,0	1/1:0,5:5:9.03:147,9,0	0/0:12,0:12:27.09:0,27,528	0/0:31,0:31:90.31:0,90,1792	1/1:0,14:13:39.05:590,39,0	0/1:1,18:19:3.78:824,0,4	1/1:0,24:24:65.99:1047,66,0	1/1:0,3:3:3.01:49,3,0
chr10	66057527	.	A	AAT	8863.31	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-14.313;DP=420;FS=9.622;HRun=0;HaplotypeScore=46.0168;InbreedingCoeff=0.9315;MQ=71.04;MQ0=0;MQRankSum=0.000;QD=40.66;ReadPosRankSum=4.793;VQSLOD=6.1529;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,99,1353	1/1:1,2:3:3.01:53,3,0	0/0:10,0:6:12.03:0,12,144	0/0:14,0:11:20.82:0,21,220	0/0:15,0:15:36.09:0,36,472	1/1:0,24:25:66.23:1163,66,0	1/1:0,8:8:12.04:211,12,0	0/0:29,0:29:84.22:0,84,1038	0/0:6,0:6:17.85:0,18,230	0/0:18,0:18:54.17:0,54,743	0/0:18,0:18:54.15:0,54,712	1/1:0,7:7:18.06:309,18,0	0/0:2,0:2:6.02:0,6,87	1/1:0,7:7:15.05:264,15,0	1/1:1,6:8:9.02:159,9,0	0/0:12,0:12:36.12:0,36,521	1/1:0,30:31:72.72:1269,73,0	0/0:28,0:28:84.23:0,84,1136	1/1:1,21:22:43.39:898,43,0	1/1:0,17:18:45.06:707,45,0	1/1:1,13:14:30.10:528,30,0	1/1:1,6:7:11.95:175,12,0	0/0:12,0:12:28.24:0,28,307	0/0:4,0:4:12.04:0,12,164	1/1:0,16:16:42.14:740,42,0	1/1:0,22:22:66.09:1028,66,0	1/1:0,16:17:42.14:725,42,0	1/1:0,13:13:36.12:634,36,0
chr10	66058879	.	AACACACACAC	A	3567.36	PASS	AC=28;AF=0.519;AN=54;BaseQRankSum=10.715;DP=600;FS=0.000;HRun=0;HaplotypeScore=244.0108;InbreedingCoeff=0.8180;MQ=60.18;MQ0=11;MQRankSum=-8.239;QD=13.16;ReadPosRankSum=2.404;VQSLOD=2.4742;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:32:36.11:0,36,1413	1/1:11,4:15:8.23:189,8,0	0/0:34,0:19:15.04:0,15,194	0/0:26,0:12:5.95:0,6,43	0/0:22,0:25:63.22:0,63,2205	1/1:17,3:20:2.88:15,3,0	./.	1/1:21,0:21:16.93:98,17,0	0/0:23,0:23:27.07:0,27,473	0/0:22,0:22:42.14:0,42,1026	0/0:8,0:8:12.04:0,12,343	1/1:15,5:20:9.02:174,9,0	0/0:16,0:17:45.15:0,45,1630	1/1:10,7:16:9.03:204,9,0	1/1:8,6:14:12.04:296,12,0	0/0:12,0:12:3.01:0,3,48	1/1:18,2:19:8.83:73,9,0	0/0:17,0:17:25.79:0,26,305	1/1:13,2:15:6.01:127,6,0	1/1:16,5:21:6.02:117,6,0	0/0:22,1:23:3.01:0,3,50	1/1:24,9:33:14.21:263,14,0	0/0:15,0:17:39.09:0,39,1266	0/0:46,0:46:84.29:0,84,3153	1/1:8,3:12:12.04:264,12,0	1/1:16,15:31:69.79:1204,70,0	1/1:15,4:19:8.97:119,9,0	1/1:7,6:13:23.84:425,24,0
chr10	66058906	.	A	ATG	1170.44	PASS	AB=0.965;AC=15;AF=0.268;AN=56;BaseQRankSum=7.900;DP=571;FS=8.469;HRun=0;HaplotypeScore=207.5015;InbreedingCoeff=-0.1459;MQ=39.46;MQ0=23;MQRankSum=-6.110;QD=5.44;ReadPosRankSum=3.079;VQSLOD=2.3214;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:47.96:0,48,683	0/1:13,0:13:27.77:60,0,28	0/0:30,0:8:24.07:0,24,337	0/0:43,0:3:6.02:0,6,95	0/0:27,0:27:78.23:0,78,1171	1/1:9,2:11:3.01:38,3,0	0/0:16,1:15:8.39:0,8,74	0/0:12,0:12:27.53:0,28,301	0/0:20,0:20:19.48:0,19,233	0/0:25,0:25:61.69:0,62,648	0/0:7,0:7:15.02:0,15,183	0/1:14,1:15:40.61:41,0,130	0/0:21,0:20:57.16:0,57,834	0/1:18,1:18:42.80:43,0,45	0/1:15,0:15:3.49:3,0,33	0/0:14,0:14:3.01:0,3,43	0/1:19,1:19:58.76:118,0,59	0/0:16,0:16:27.47:0,27,315	0/1:14,0:13:43.23:43,0,121	1/1:16,1:17:0.31:42,0,0	0/0:17,1:18:3:0,3,25	0/1:27,1:28:26.99:41,0,27	0/0:18,0:18:51.16:0,51,765	0/0:53,0:52:99:0,120,1811	0/1:10,0:10:39.80:41,0,40	0/1:25,4:29:50.17:677,0,50	0/1:12,1:13:54.03:111,0,54	0/1:11,0:11:62.58:63,0,66
chr10	66058910	.	A	ACACACACG	1251.30	PASS	AB=1.000;AC=20;AF=0.385;AN=52;BaseQRankSum=0.486;DP=586;FS=10.288;HRun=0;HaplotypeScore=264.4728;InbreedingCoeff=-0.0156;MQ=38.81;MQ0=23;MQRankSum=-2.423;QD=4.62;ReadPosRankSum=-4.779;VQSLOD=0.0619;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:44.56:0,45,679	0/1:12,0:12:0.98:1,0,72	0/0:30,0:6:14.99:0,15,135	0/0:43,0:4:6.01:0,6,62	0/0:26,0:26:59.05:0,59,958	./.	0/1:18,0:16:8.57:17,0,9	0/0:14,0:14:24.08:0,24,135	1/1:19,0:19:4.30:115,4,0	1/1:6,18:28:53.69:660,54,0	1/1:6,0:6:11.99:207,12,0	0/1:18,0:18:52.23:52,0,94	0/0:21,0:20:49.91:0,50,668	0/1:22,0:21:16.09:16,0,71	0/1:16,0:16:5.07:5,0,57	./.	0/1:19,0:18:16.28:56,0,16	0/1:14,0:14:19.80:143,0,20	0/1:16,0:15:37.04:37,0,48	0/0:18,0:18:3.01:0,3,50	1/1:17,0:17:3:25,3,0	0/0:29,0:29:0.68:0,1,72	0/0:17,0:17:29.94:0,30,573	0/0:52,0:51:22.81:0,23,1318	0/1:11,0:11:0.80:1,0,116	0/1:31,0:31:21.11:21,0,338	0/1:13,0:13:18.83:19,0,19	0/1:11,0:11:32.97:33,0,234
chr10	66058914	.	GCA	G	2447.88	PASS	AB=0.870;AC=25;AF=0.463;AN=54;BaseQRankSum=11.103;DP=585;FS=1.545;HRun=0;HaplotypeScore=209.1449;InbreedingCoeff=0.6766;MQ=39.75;MQ0=21;MQRankSum=-10.425;QD=9.79;ReadPosRankSum=3.480;VQSLOD=3.0368;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:53.84:0,54,875	0/1:9,3:12:2.93:91,0,3	0/0:36,0:9:15.88:0,16,265	0/0:49,1:7:17.86:0,18,235	0/0:23,0:23:62.90:0,63,939	./.	1/1:10,8:16:5.84:61,6,0	0/1:16,0:16:5.36:5,0,66	0/0:19,0:19:7.68:0,8,51	0/0:26,0:26:59.75:0,60,809	0/0:8,0:8:15.05:0,15,231	1/1:9,9:18:14.33:228,14,0	0/0:19,0:19:33.33:0,33,658	1/1:11,10:21:18:200,18,0	1/1:10,6:16:11.10:165,11,0	0/0:14,0:14:2.92:0,3,17	1/1:11,8:18:9.81:171,10,0	0/0:11,0:11:18.98:0,19,165	1/1:11,5:15:38.34:365,38,0	1/1:15,3:18:3.01:38,3,0	0/0:17,0:17:0:0,0,0	1/1:21,9:30:17.78:174,18,0	0/0:17,0:17:47.15:0,47,753	0/0:47,0:46:99:0,102,1642	1/1:8,4:12:12.03:138,12,0	0/1:23,7:30:20.95:614,0,21	1/1:10,3:13:6.37:94,6,0	1/1:8,3:11:24.07:299,24,0
chr10	66058916	.	ACG	A	1757.19	PASS	AB=0.906;AC=27;AF=0.519;AN=52;BaseQRankSum=12.486;DP=604;FS=3.388;HRun=0;HaplotypeScore=218.3330;InbreedingCoeff=0.6729;MQ=39.73;MQ0=20;MQRankSum=-10.542;QD=6.32;ReadPosRankSum=2.951;VQSLOD=3.1352;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:60.62:0,61,1032	1/1:10,3:13:8.88:59,9,0	0/0:39,1:11:27.88:0,28,389	0/0:52,0:9:23.38:0,23,291	0/0:21,0:21:57.03:0,57,1025	./.	1/1:19,0:17:5.76:35,6,0	0/1:16,0:16:58.74:66,0,59	1/1:20,0:20:6.72:98,7,0	0/0:24,0:24:53.85:0,54,890	0/0:9,0:9:21.07:0,21,330	1/1:16,3:19:22.75:147,23,0	0/0:17,0:17:24.92:0,25,694	1/1:19,1:20:16.33:100,16,0	1/1:13,3:16:10.86:93,11,0	0/0:15,0:15:6.02:0,6,73	1/1:17,3:19:7.15:108,7,0	0/0:11,0:11:1.91:0,2,112	1/1:11,6:16:27.82:388,28,0	1/1:13,5:18:2.97:20,3,0	./.	0/1:30,1:31:1.89:99,0,2	0/0:18,0:18:47.53:0,48,804	0/0:49,0:48:99:0,105,1766	1/1:12,1:13:11.88:83,12,0	1/1:29,1:30:57.30:435,57,0	0/1:10,5:15:8.08:61,0,8	1/1:10,1:11:23.73:159,24,0
chr10	66058918	.	GCA	G	601.30	PASS	AB=0.850;AC=23;AF=0.426;AN=54;BaseQRankSum=11.932;DP=582;FS=2.325;HRun=0;HaplotypeScore=214.1764;InbreedingCoeff=0.4065;MQ=40.31;MQ0=19;MQRankSum=-10.530;QD=2.47;ReadPosRankSum=5.264;VQSLOD=2.2726;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:60.20:0,60,1084	1/1:7,5:12:6.75:37,7,0	0/0:39,0:11:27.97:0,28,439	0/0:57,0:13:36.92:0,37,514	0/0:24,0:24:69.18:0,69,1192	./.	1/1:13,4:15:1.65:4,2,0	0/1:16,0:16:15.46:15,0,52	0/0:20,0:20:5.08:0,5,52	0/0:22,0:22:54.07:0,54,878	0/0:11,0:11:27.06:0,27,397	1/1:14,5:19:4.30:43,4,0	0/0:17,0:17:38.46:0,38,749	1/1:12,7:19:9.51:44,10,0	1/1:9,6:15:8.57:62,9,0	0/0:15,0:15:6.02:0,6,92	0/1:18,2:19:8.77:16,0,9	0/0:10,0:10:3.19:0,3,40	0/1:16,2:17:8.17:157,0,8	1/1:10,5:15:2.92:17,3,0	0/0:16,1:17:0:0,0,0	1/1:15,9:25:0.61:53,1,0	0/0:17,0:17:48.16:0,48,866	0/0:43,0:43:99:0,99,1789	1/1:10,4:14:3.35:35,3,0	0/1:13,15:28:14.22:166,0,14	0/1:11,4:15:8.83:9,0,34	1/1:4,6:10:21.23:113,21,0
chr10	66058922	.	GCA	G	405.93	PASS	AB=0.983;AC=20;AF=0.370;AN=54;BaseQRankSum=10.871;DP=583;FS=0.525;HRun=0;HaplotypeScore=214.4398;InbreedingCoeff=0.1836;MQ=40.37;MQ0=18;MQRankSum=-9.742;QD=1.58;ReadPosRankSum=5.349;VQSLOD=2.0610;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:63.21:0,63,1124	1/1:12,0:12:1.40:9,1,0	0/0:41,0:12:30.53:0,31,473	0/0:60,0:14:39.13:0,39,597	0/0:24,0:24:69.24:0,69,1227	./.	0/1:20,0:19:8.67:9,0,16	0/1:13,0:13:9.65:10,0,103	0/1:12,3:15:18.48:25,0,18	0/0:22,0:22:46.25:0,46,692	0/0:11,0:11:27.09:0,27,437	0/1:20,0:20:0.98:7,0,1	0/0:16,0:16:47.32:0,47,759	0/1:19,0:19:3.17:8,0,3	1/1:15,0:15:1.83:17,2,0	0/0:15,0:15:6.02:0,6,97	0/1:20,0:20:11.77:12,0,34	1/1:7,3:10:23.41:237,23,0	0/1:18,0:17:43.95:127,0,44	1/1:15,0:15:2.37:8,2,0	0/0:17,0:17:0:0,0,0	0/1:26,0:26:4.83:5,0,20	0/0:17,0:17:51.14:0,51,856	0/0:41,0:41:96.33:0,96,1735	0/1:15,0:15:6.07:6,0,21	0/1:29,0:29:26.66:47,0,27	0/0:15,0:15:7.37:0,7,69	1/1:10,0:10:12.31:37,12,0
chr10	66058923	.	CACAT	C	2074.01	PASS	AB=1.000;AC=29;AF=0.537;AN=54;BaseQRankSum=12.685;DP=590;FS=0.000;HRun=0;HaplotypeScore=223.4496;InbreedingCoeff=0.6784;MQ=41.85;MQ0=18;MQRankSum=-11.060;QD=7.57;ReadPosRankSum=5.058;VQSLOD=2.3732;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:63.22:0,63,1503	1/1:12,0:12:8.95:80,9,0	0/0:41,0:12:22.05:0,22,677	0/0:64,0:16:44.45:0,44,881	0/0:25,0:25:72.25:0,72,1675	./.	1/1:20,0:19:0.71:25,1,0	1/1:0,13:13:35.54:415,36,0	0/1:14,0:14:1.45:28,0,1	0/0:22,0:22:52.02:0,52,1106	0/0:11,0:11:27.09:0,27,558	1/1:20,0:20:19.33:137,19,0	0/0:16,0:16:47.91:0,48,1009	1/1:20,0:20:17.87:119,18,0	1/1:15,0:15:10.99:138,11,0	0/0:15,0:15:5.99:0,6,72	1/1:20,0:20:11.96:92,12,0	1/1:10,0:10:9.46:139,9,0	1/1:18,0:17:3.54:97,4,0	1/1:15,0:15:3:29,3,0	0/0:17,0:17:0.47:0,0,1	0/1:26,0:26:11.51:97,0,12	0/0:17,0:17:51.14:0,51,1093	0/0:42,0:42:99:0,99,2407	0/1:17,0:17:0.18:92,0,0	1/1:29,0:29:59.89:512,60,0	1/1:15,0:15:4.57:62,5,0	1/1:10,0:10:23.65:204,24,0
chr10	66058925	.	CAT	C	1907.19	PASS	AB=0.845;AC=31;AF=0.574;AN=54;BaseQRankSum=13.392;DP=589;FS=1.405;HRun=0;HaplotypeScore=206.3783;InbreedingCoeff=0.7587;MQ=42.68;MQ0=18;MQRankSum=-10.092;QD=6.74;ReadPosRankSum=2.314;VQSLOD=3.1784;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:78.17:0,78,1385	1/1:4,7:11:8.71:55,9,0	0/0:43,0:14:32.94:0,33,647	0/0:65,0:16:47.74:0,48,849	0/0:26,0:26:75.24:0,75,1466	./.	1/1:15,5:19:13.83:84,14,0	0/1:13,0:13:31.99:93,0,32	0/1:9,2:11:1.47:16,0,1	0/0:20,0:20:22.73:0,23,689	0/0:11,0:11:27.09:0,27,508	1/1:13,5:18:22.30:123,22,0	0/0:16,0:16:44.81:0,45,819	1/1:12,7:19:19.15:129,19,0	1/1:7,7:14:10.69:89,11,0	0/0:15,0:15:9.02:0,9,135	1/1:16,5:21:21.19:154,21,0	1/1:4,6:10:23.97:246,24,0	1/1:18,3:20:15.89:162,16,0	1/1:7,9:16:5.97:45,6,0	1/1:16,2:18:8.85:72,9,0	1/1:16,10:26:10.53:86,11,0	0/0:17,0:17:48.14:0,48,865	0/0:44,0:44:99:0,105,2038	1/1:11,5:16:20.37:131,20,0	1/1:13,16:29:67:441,67,0	0/1:6,5:11:5.71:25,0,6	1/1:3,6:9:23.66:161,24,0
chr10	66058928	.	GCA	G	79.96	PASS	AB=0.688;AC=3;AF=0.056;AN=54;BaseQRankSum=3.593;DP=608;FS=9.435;HRun=0;HaplotypeScore=213.7608;InbreedingCoeff=0.5347;MQ=45.51;MQ0=18;MQRankSum=-2.194;QD=3.63;ReadPosRankSum=0.358;VQSLOD=1.5568;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:81.21:0,81,1388	0/0:11,0:11:6.85:0,7,49	0/0:50,0:18:45.12:0,45,771	0/0:67,0:19:51.84:0,52,922	0/0:27,0:27:75.26:0,75,1336	./.	0/0:19,0:18:14.98:0,15,155	0/0:19,0:19:40.25:0,40,333	0/1:6,5:11:11.19:11,0,24	0/0:22,0:22:57.19:0,57,997	0/0:11,0:11:27.09:0,27,492	0/0:17,0:17:16.76:0,17,187	0/0:16,0:16:48.14:0,48,816	0/0:19,0:19:23.33:0,23,214	0/0:15,0:15:16.13:0,16,106	0/0:16,0:16:12.04:0,12,219	0/0:19,0:21:32.45:0,32,355	1/1:6,5:11:21.80:169,22,0	0/0:21,0:21:43.81:0,44,482	0/0:15,0:15:5.69:0,6,50	0/0:18,0:19:15.05:0,15,196	0/0:27,0:27:22.85:0,23,289	0/0:15,0:15:42.14:0,42,757	0/0:45,0:45:99:0,111,1993	0/0:16,0:16:18.27:0,18,234	0/0:29,0:29:57.45:0,57,570	0/0:11,0:11:17.78:0,18,199	0/0:9,0:9:19.56:0,20,156
chr10	66058933	.	C	CAT	76.45	PASS	AB=1.000;AC=3;AF=0.056;AN=54;BaseQRankSum=3.426;DP=652;FS=4.362;HRun=0;HaplotypeScore=225.5633;InbreedingCoeff=0.4794;MQ=48.47;MQ0=16;MQRankSum=-1.491;QD=2.25;ReadPosRankSum=-0.709;VQSLOD=2.5139;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:82.89:0,83,1263	0/0:11,0:11:9.03:0,9,129	0/0:58,0:25:57.61:0,58,752	0/0:73,0:23:54.82:0,55,850	0/0:27,0:27:78.08:0,78,1230	./.	0/0:20,0:21:21.03:0,21,279	0/0:22,0:22:50.32:0,50,518	1/1:10,11:21:5.81:60,6,0	0/0:22,0:22:60.15:0,60,929	0/0:13,0:13:30.08:0,30,454	0/0:17,0:17:23.53:0,24,333	0/0:17,0:17:48.15:0,48,739	0/0:20,0:20:21:0,21,276	0/0:15,0:15:18:0,18,231	0/0:16,0:16:18.03:0,18,240	0/0:24,0:24:38.72:0,39,490	0/1:13,0:13:14.10:110,0,14	0/0:20,0:20:49.39:0,49,598	0/0:15,0:15:6.02:0,6,88	0/0:19,0:19:14.99:0,15,178	0/0:28,0:28:29.99:0,30,430	0/0:17,0:17:48.06:0,48,711	0/0:47,0:47:99:0,108,1727	0/0:16,0:16:24.07:0,24,346	0/0:32,0:32:76.21:0,76,931	0/0:11,0:11:17.96:0,18,226	0/0:9,0:9:24.08:0,24,364
chr10	66058938	.	GCACA	G	183.59	PASS	AB=0.889;AC=3;AF=0.054;AN=56;BaseQRankSum=4.324;DP=678;FS=0.929;HRun=0;HaplotypeScore=242.1775;InbreedingCoeff=0.5985;MQ=50.44;MQ0=12;MQRankSum=-0.534;QD=4.71;ReadPosRankSum=-2.394;VQSLOD=1.8973;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:90.23:0,90,2209	0/0:10,0:10:12.02:0,12,147	0/0:62,0:31:76.28:0,76,1687	0/0:73,0:26:78.12:0,78,1705	0/0:26,0:26:75.23:0,75,1898	0/0:9,0:9:2.99:0,3,24	0/0:23,0:23:23.66:0,24,499	0/0:25,0:25:49.83:0,50,452	0/1:21,3:24:1.10:72,0,1	0/0:22,0:22:54.13:0,54,1325	0/0:13,0:13:39.08:0,39,945	0/0:19,0:19:30.06:0,30,490	0/0:20,0:20:58.93:0,59,1305	0/0:22,0:22:27.07:0,27,435	0/0:15,0:15:23.08:0,23,281	0/0:16,0:16:21:0,21,455	0/0:24,0:24:42.46:0,42,770	1/1:13,2:15:5.39:206,5,0	0/0:20,0:20:46.36:0,46,824	0/0:11,0:11:6.02:0,6,101	0/0:20,0:20:18.05:0,18,370	0/0:30,0:30:38.95:0,39,688	0/0:18,0:18:54.17:0,54,1328	0/0:46,0:46:99:0,117,3087	0/0:18,0:18:15.71:0,16,454	0/0:34,0:34:83.73:0,84,1342	0/0:12,0:12:23.21:0,23,364	0/0:9,0:9:24.08:0,24,366
chr10	66059952	.	T	TCA	5620.07	PASS	AB=0.686;AC=26;AF=0.464;AN=56;BaseQRankSum=3.634;DP=719;FS=19.684;HRun=0;HaplotypeScore=162.6697;InbreedingCoeff=0.5094;MQ=62.99;MQ0=6;MQRankSum=-7.074;QD=16.48;ReadPosRankSum=0.555;VQSLOD=3.3235;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:52:99:0,120,1457	1/1:4,11:15:33.11:527,33,0	0/0:42,0:32:8.15:0,8,346	0/0:25,0:13:28.43:0,28,268	0/0:22,0:22:54.16:0,54,652	0/1:16,7:21:11.37:311,0,11	1/1:16,15:30:32.47:485,32,0	1/1:29,0:29:20.15:141,20,0	0/0:8,0:12:8.44:0,8,40	0/0:44,1:44:77.43:0,77,1316	0/0:25,0:25:60.16:0,60,722	0/1:8,10:18:12.85:307,0,13	0/0:22,0:22:50.98:0,51,591	1/1:9,7:14:27.01:371,27,0	1/1:8,17:23:21.07:342,21,0	0/0:35,0:35:87.26:0,87,1058	0/1:16,7:23:52.79:219,0,53	0/0:8,0:15:1.71:0,2,68	1/1:14,3:14:17.89:249,18,0	1/1:8,25:33:59.87:968,60,0	0/1:8,6:12:52.78:200,0,53	1/1:8,25:34:14.94:244,15,0	0/0:18,0:20:53.35:0,53,600	0/0:59,0:59:99:0,147,1781	0/1:5,18:23:12.83:317,0,13	0/1:9,8:17:19.39:377,0,19	1/1:6,9:15:27.32:426,27,0	1/1:6,2:8:3.79:135,4,0
chr10	66059966	.	ACT	A	862.81	PASS	AB=0.962;AC=16;AF=0.286;AN=56;BaseQRankSum=6.590;DP=695;FS=5.202;HRun=0;HaplotypeScore=175.2628;InbreedingCoeff=-0.2376;MQ=52.90;MQ0=14;MQRankSum=-4.497;QD=2.78;ReadPosRankSum=-6.238;VQSLOD=0.3634;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,135,2301	0/0:12,0:12:3.74:0,4,168	0/0:36,0:20:27.84:0,28,604	0/1:33,1:12:13.27:13,0,248	0/0:22,0:22:60.16:0,60,1041	0/1:18,0:17:34.13:34,0,45	0/1:28,0:27:47.02:47,0,59	0/1:15,16:26:58.83:605,0,59	0/1:16,0:15:40.01:40,0,63	0/0:48,0:47:99:0,135,2344	0/0:21,0:21:63.19:0,63,1125	0/1:17,0:17:22.89:23,0,109	0/0:25,0:24:60.35:0,60,1076	0/1:12,2:12:44.82:51,0,45	0/1:20,0:18:6.16:6,0,53	0/0:32,0:32:93.29:0,93,1706	0/0:18,0:18:22.16:0,22,199	1/1:12,0:12:3.57:110,4,0	0/0:17,0:13:5.17:0,5,89	0/1:32,0:32:31.31:31,0,173	0/1:14,0:12:5.16:5,0,149	0/1:31,0:31:4.20:4,0,17	0/0:20,0:20:44.33:0,44,960	0/0:69,0:69:99:0,195,3186	0/1:23,1:24:0.69:1,0,162	0/0:12,0:12:18.83:0,19,252	0/1:13,0:13:24.19:24,0,92	0/1:5,0:4:17.78:18,0,27
chr10	66059978	.	ACT	A	762.15	PASS	AB=0.980;AC=19;AF=0.339;AN=56;BaseQRankSum=11.513;DP=742;FS=14.726;HRun=0;HaplotypeScore=193.8203;InbreedingCoeff=-0.2370;MQ=46.52;MQ0=20;MQRankSum=-8.616;QD=1.96;ReadPosRankSum=1.429;VQSLOD=1.8623;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,120,1986	0/1:12,0:12:35.84:102,0,36	0/0:30,1:10:15.24:0,15,267	0/1:39,2:9:1.74:2,0,181	0/0:22,0:22:65.93:0,66,1121	0/1:16,0:15:13.65:14,0,62	0/1:26,2:27:7.76:99,0,8	0/1:30,0:25:3.84:4,0,309	0/1:15,1:14:26.20:122,0,26	0/0:50,0:48:99:0,132,2227	0/0:23,0:23:69.02:0,69,1252	1/1:19,0:19:10.52:85,11,0	0/0:29,0:28:84.26:0,84,1529	0/1:14,0:13:2:2,0,39	0/0:22,0:20:8.40:0,8,75	0/0:36,0:36:99:0,105,1742	0/1:15,1:16:7.39:127,0,7	0/1:9,1:10:30.18:69,0,30	0/1:20,0:17:15.32:15,0,202	0/1:32,0:32:99:111,0,101	0/1:16,0:13:5.85:6,0,42	0/1:35,0:35:1.98:2,0,53	0/0:22,0:22:60.07:0,60,943	0/0:72,0:72:99:0,201,3459	0/1:30,0:30:4.36:4,0,67	0/1:22,0:22:99:105,0,159	0/1:17,0:17:38.38:38,0,74	0/1:11,0:10:6.07:6,0,41
chr10	66059980	.	TCA	T	2128.84	PASS	AB=0.781;AC=25;AF=0.446;AN=56;BaseQRankSum=9.123;DP=747;FS=6.842;HRun=0;HaplotypeScore=193.9753;InbreedingCoeff=0.1207;MQ=45.21;MQ0=22;MQRankSum=-7.482;QD=5.68;ReadPosRankSum=-0.033;VQSLOD=2.2115;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,1:48:93.30:0,93,1536	0/1:6,7:13:23.60:209,0,24	0/0:29,0:8:15.05:0,15,241	0/0:45,0:8:11.72:0,12,167	0/0:23,0:23:60.17:0,60,964	0/1:12,4:15:16.15:82,0,16	0/1:19,8:26:46.11:134,0,46	0/1:27,5:25:73.90:161,0,74	1/1:8,10:16:17.94:220,18,0	0/0:46,0:44:99:0,108,1734	0/0:24,0:24:69.22:0,69,1125	0/1:14,7:21:32.31:169,0,32	0/0:31,0:30:87.28:0,87,1444	1/1:12,0:12:2.93:27,3,0	1/1:11,12:21:5.86:45,6,0	0/0:35,0:35:84.24:0,84,1392	0/1:9,7:16:27.01:181,0,27	1/1:8,3:11:14.34:174,14,0	0/1:17,2:17:42.15:42,0,284	1/1:14,19:33:27.26:326,27,0	1/1:11,4:13:8.96:81,9,0	1/1:12,23:35:2.95:38,3,0	0/0:20,0:20:48.16:0,48,796	0/0:70,0:70:99:0,175,2856	0/1:17,14:31:14.55:76,0,15	0/1:17,6:23:99:206,0,256	0/1:14,4:18:99:115,0,108	0/1:9,2:10:27.95:28,0,37
chr10	66059988	.	ACACT	A	197.90	PASS	AB=0.993;AC=13;AF=0.232;AN=56;BaseQRankSum=7.568;DP=775;FS=18.993;HRun=0;HaplotypeScore=227.1497;InbreedingCoeff=-0.0237;MQ=42.36;MQ0=40;MQRankSum=-5.959;QD=0.71;ReadPosRankSum=-5.835;VQSLOD=-0.3554;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:84.07:0,84,2051	0/1:12,0:12:25.14:25,0,78	0/0:31,0:7:11.91:0,12,205	0/0:57,0:7:11.63:0,12,179	0/0:23,0:23:63.14:0,63,1365	0/1:13,0:13:10.69:28,0,11	0/1:24,1:24:27.87:28,0,70	0/1:46,0:36:27.70:28,0,508	0/0:15,0:13:11.46:0,11,76	0/0:45,0:41:92.91:0,93,2084	0/0:26,0:26:69.21:0,69,1569	0/0:22,0:22:14.38:0,14,90	0/0:34,0:33:96.28:0,96,2145	0/0:15,0:15:2.92:0,3,30	0/0:20,0:18:0:0,0,0	0/0:36,0:36:99:0,99,2071	0/1:20,0:20:19.72:20,0,123	0/1:9,0:9:20.31:20,0,74	0/0:24,0:16:23.49:0,23,493	0/1:31,0:31:0.68:1,0,73	0/0:18,2:17:2.91:0,3,19	0/1:32,0:32:0.09:0,0,0	0/0:20,0:20:54.16:0,54,1170	0/0:64,0:64:99:0,166,4006	0/1:35,0:35:12.02:12,0,14	0/1:24,1:25:50.22:50,0,248	0/1:18,0:18:58.74:59,0,176	1/1:12,0:11:12.04:72,12,0
chr10	66059992	.	T	TCA	1860.41	PASS	AB=0.877;AC=16;AF=0.286;AN=56;BaseQRankSum=7.398;DP=795;FS=29.907;HRun=0;HaplotypeScore=206.5843;InbreedingCoeff=-0.1744;MQ=41.47;MQ0=41;MQRankSum=-6.537;QD=5.24;ReadPosRankSum=-6.109;VQSLOD=0.2672;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:87.25:0,87,1223	0/1:10,2:12:99:149,0,120	0/0:32,0:6:11.91:0,12,149	0/0:65,0:6:0.09:0,0,109	0/0:23,0:23:66.20:0,66,894	0/1:8,4:12:26.54:83,0,27	0/1:27,0:26:31.02:255,0,31	0/1:46,0:35:99:102,0,707	0/0:16,0:15:14.38:0,14,169	0/0:44,0:40:94.76:0,95,1334	0/0:27,0:27:72.23:0,72,1009	0/1:19,5:24:79.80:80,0,96	0/0:35,0:34:99:0,99,1352	0/0:14,2:16:3.01:0,3,34	0/1:18,2:18:0:0,0,0	0/0:37,0:37:99:0,105,1429	0/1:16,7:23:99:240,0,188	0/1:8,1:9:90.31:105,0,90	0/1:23,1:17:29.95:30,0,379	0/1:25,5:30:33.35:33,0,120	0/0:18,2:16:2.88:0,3,39	0/1:33,3:36:0.13:0,0,0	0/0:20,0:20:54.15:0,54,747	0/0:62,0:62:99:0,166,2314	0/1:27,7:34:9.74:96,0,10	0/1:20,7:27:99:368,0,217	0/1:16,2:18:99:290,0,146	1/1:8,4:11:7.43:178,7,0
chr10	66060018	.	ACACT	A	242.21	PASS	AB=0.901;AC=3;AF=0.054;AN=56;BaseQRankSum=5.248;DP=892;FS=0.000;HRun=0;HaplotypeScore=236.0120;InbreedingCoeff=-0.0893;MQ=39.97;MQ0=57;MQRankSum=-5.737;QD=3.78;ReadPosRankSum=-2.314;VQSLOD=2.2137;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:87.10:0,87,2023	0/0:11,0:11:18.49:0,18,387	0/0:31,0:1:3.01:0,3,35	0/0:75,0:4:11.37:0,11,179	0/0:21,0:21:43.18:0,43,1138	0/0:26,0:24:18.07:0,18,288	0/0:36,0:35:35.71:0,36,885	0/0:59,0:43:6.24:0,6,1846	0/1:31,1:28:22.79:23,0,722	0/0:38,0:34:90.21:0,90,1845	0/0:26,0:26:66.19:0,66,1447	0/0:33,0:32:19.42:0,19,278	0/0:37,0:35:87.22:0,87,2416	0/1:21,0:20:15.44:15,0,73	0/0:25,0:23:3.01:0,3,76	0/0:37,0:35:99:0,99,2318	0/0:18,0:18:37.90:0,38,623	0/1:7,4:11:14.65:301,0,15	0/0:27,0:11:30.10:0,30,534	0/0:29,0:28:1.06:0,1,38	0/0:29,0:26:6.40:0,6,131	0/0:38,0:38:3.40:0,3,82	0/0:20,0:20:51.16:0,51,1203	0/0:67,0:67:99:0,186,4298	0/0:34,0:34:9.03:0,9,219	0/0:36,0:36:43.01:0,43,1656	0/0:26,0:26:5.39:0,5,725	0/0:12,0:12:23.88:0,24,587
chr10	66060042	.	T	TCA	1180.09	PASS	AB=0.919;AC=19;AF=0.339;AN=56;BaseQRankSum=10.833;DP=940;FS=1.491;HRun=0;HaplotypeScore=250.0184;InbreedingCoeff=0.1163;MQ=39.38;MQ0=48;MQRankSum=-8.812;QD=2.66;ReadPosRankSum=-0.389;VQSLOD=2.4630;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:69.19:0,69,874	0/1:9,0:9:5.23:5,0,30	0/0:29,0:3:5.04:0,5,49	0/0:55,0:4:2.92:0,3,17	0/0:17,0:17:47.52:0,48,606	0/1:23,6:28:2.02:26,0,2	0/0:41,5:45:5.69:0,6,133	0/0:37,0:29:50.77:0,51,482	0/1:34,0:31:27.62:28,0,279	0/0:28,0:25:54.13:0,54,683	0/0:22,0:22:42.12:0,42,539	0/1:42,1:42:24.13:59,0,24	0/0:42,0:41:96.39:0,96,1275	0/1:28,9:35:14.52:15,0,15	1/1:31,4:33:0.02:1,0,0	0/0:34,0:32:72.17:0,72,919	0/1:20,4:26:38.08:209,0,38	0/0:16,0:18:22.09:0,22,257	0/1:25,0:14:50.90:51,0,147	1/1:26,1:26:4.04:37,4,0	0/0:27,6:29:2.80:0,3,39	1/1:40,9:49:0.22:1,0,0	0/0:21,0:21:45.15:0,45,596	0/0:68,0:66:99:0,165,2116	1/1:34,1:35:2.60:10,3,0	0/1:42,4:45:99:324,0,281	1/1:26,7:33:22.62:400,23,0	0/1:12,2:14:12.65:167,0,13
chr10	66060050	.	T	TCA	3741.35	PASS	AB=0.818;AC=23;AF=0.426;AN=54;BaseQRankSum=9.823;DP=904;FS=2.476;HRun=0;HaplotypeScore=235.6559;InbreedingCoeff=0.4379;MQ=39.29;MQ0=47;MQRankSum=-9.152;QD=8.19;ReadPosRankSum=-0.303;VQSLOD=3.1338;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:58.88:0,59,890	1/1:4,5:9:8.71:113,9,0	0/0:23,0:3:2.99:0,3,38	./.	0/0:19,0:19:51.15:0,51,640	1/1:18,11:27:14.48:189,14,0	1/1:21,19:42:20.23:316,20,0	0/1:29,0:22:21.10:21,0,484	0/0:36,0:33:17.52:0,18,246	0/0:30,0:27:73.95:0,74,879	0/0:20,0:20:30.10:0,30,388	0/1:19,20:38:18.30:220,0,18	0/0:45,0:42:97.54:0,98,1234	0/0:21,13:32:7.07:0,7,25	1/1:19,17:33:5.46:68,5,0	0/0:29,0:27:63.20:0,63,817	0/1:19,6:25:67.47:250,0,67	0/1:20,0:17:0.67:1,0,338	0/1:19,5:17:53.67:287,0,54	1/1:8,20:27:8.76:98,9,0	0/0:30,10:35:0.99:0,1,3	0/1:31,18:47:0.13:0,0,0	0/0:20,0:20:45.15:0,45,584	0/0:69,0:66:99:0,150,1844	1/1:14,22:36:5.61:102,6,0	0/1:27,17:43:26.48:935,0,26	1/1:14,17:31:62.50:768,62,0	1/1:7,7:14:27.51:374,28,0
chr10	66060056	.	ACACT	A	877.28	PASS	AB=0.979;AC=14;AF=0.269;AN=52;BaseQRankSum=9.358;DP=883;FS=0.000;HRun=0;HaplotypeScore=257.4589;InbreedingCoeff=-0.0937;MQ=39.22;MQ0=40;MQRankSum=-10.273;QD=2.33;ReadPosRankSum=0.066;VQSLOD=2.0271;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:74.94:0,75,1764	0/1:9,0:9:5.86:6,0,57	./.	./.	0/0:19,0:19:48.16:0,48,1061	0/1:29,0:27:1.06:51,0,1	0/0:42,0:41:7.73:0,8,68	0/1:27,0:21:17.86:18,0,575	0/1:31,3:35:0.20:0,0,361	0/0:31,0:28:60.44:0,60,1447	0/0:18,0:18:33.11:0,33,671	1/1:40,0:39:2.86:112,3,0	0/0:45,0:42:99:0,102,2338	0/1:34,0:32:10.53:11,0,49	0/0:37,0:34:4.10:0,4,25	0/0:30,0:28:63.20:0,63,1240	0/1:23,0:23:56.05:56,0,193	0/1:18,2:17:66.63:67,0,467	0/1:22,0:15:94.37:94,0,120	0/0:27,0:27:3.36:0,3,69	0/0:41,0:36:0.36:0,0,1	0/1:49,0:47:0.24:0,0,0	0/0:20,0:20:45.15:0,45,1102	0/0:65,0:62:99:0,144,3355	0/0:34,1:35:5.77:0,6,74	0/1:41,0:41:99:314,0,400	0/1:31,0:31:99:223,0,281	0/1:14,0:14:33.07:60,0,33
chr10	66060058	.	ACT	A	943.85	PASS	AB=0.973;AC=15;AF=0.278;AN=54;BaseQRankSum=10.233;DP=873;FS=0.983;HRun=0;HaplotypeScore=239.8259;InbreedingCoeff=-0.1412;MQ=39.19;MQ0=42;MQRankSum=-10.493;QD=2.27;ReadPosRankSum=-0.007;VQSLOD=1.8832;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:78.06:0,78,1402	0/1:9,0:9:13.11:13,0,37	0/0:17,1:3:3:0,3,38	./.	0/0:19,0:19:51.16:0,51,942	1/1:28,1:27:11.24:123,11,0	0/1:40,3:42:34.97:79,0,35	0/0:24,0:18:33.17:0,33,695	0/1:36,0:33:74.62:75,0,348	0/0:32,0:29:69.01:0,69,1383	0/0:17,0:17:33.11:0,33,621	0/1:39,1:39:7.08:137,0,7	0/0:45,0:42:99:0,112,1950	0/1:33,1:32:24.96:25,0,26	0/0:36,1:34:3.57:0,4,11	0/0:30,0:28:66.18:0,66,1217	0/1:22,1:23:88.09:88,0,158	0/1:18,0:16:35.33:35,0,306	0/1:22,2:16:52.17:107,0,52	0/1:26,0:26:5:5,0,37	0/0:40,0:36:0.38:0,0,1	0/1:48,1:47:0.30:0,0,0	0/0:20,0:20:45.15:0,45,855	0/0:64,0:61:99:0,162,2832	0/0:34,1:35:5.72:0,6,53	0/1:38,2:40:99:271,0,210	0/1:30,0:31:99:116,0,204	0/1:13,0:13:17.33:17,0,50
chr10	66060068	.	ACT	A	739.39	PASS	AB=0.968;AC=16;AF=0.308;AN=52;BaseQRankSum=6.806;DP=804;FS=13.310;HRun=0;HaplotypeScore=221.1552;InbreedingCoeff=-0.1569;MQ=39.19;MQ0=41;MQRankSum=-3.425;QD=1.83;ReadPosRankSum=1.795;VQSLOD=1.5869;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:72.03:0,72,1288	0/0:7,0:7:0.35:0,0,45	./.	./.	0/0:17,0:17:41.94:0,42,618	0/1:27,1:26:14.12:22,0,14	0/0:40,1:40:7.88:0,8,73	0/1:20,2:9:26.12:26,0,245	0/0:35,0:31:17.91:0,18,178	1/1:32,0:29:45.80:356,46,0	0/1:19,0:19:9.10:102,0,9	0/1:35,2:36:20.13:35,0,20	0/0:43,0:40:99:0,110,1818	0/1:30,1:29:15.58:22,0,16	0/0:31,2:30:4.19:0,4,26	0/1:35,0:33:46.22:189,0,46	0/1:20,1:21:35.65:36,0,213	0/0:18,0:15:0.69:0,1,190	0/1:20,0:11:15.74:16,0,212	0/0:23,1:24:4.87:0,5,64	1/1:40,1:31:0.87:2,1,0	0/1:44,1:43:0.17:0,0,0	0/0:23,0:23:51.13:0,51,861	0/0:58,0:55:99:0,141,2411	0/0:30,0:30:5.67:0,6,72	0/1:33,1:34:29.38:29,0,466	0/1:29,0:29:29.52:30,0,307	0/1:10,1:11:18.84:19,0,94
chr10	66060070	.	TCA	T	2303	PASS	AB=0.996;AC=20;AF=0.400;AN=50;BaseQRankSum=3.714;DP=799;FS=11.345;HRun=0;HaplotypeScore=223.8685;InbreedingCoeff=0.0209;MQ=39.19;MQ0=39;MQRankSum=-1.872;QD=5.55;ReadPosRankSum=0.289;VQSLOD=2.0684;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:69.14:0,69,1154	0/1:7,0:7:15.87:16,0,19	./.	./.	0/0:16,0:16:27.09:0,27,444	0/1:27,0:25:9.60:10,0,12	0/1:40,0:39:0.14:0,0,0	0/1:23,0:9:9.18:9,0,96	0/0:35,0:32:6.56:0,7,58	1/1:13,20:30:84.26:1083,84,0	1/1:9,9:18:27.09:359,27,0	0/1:36,0:35:15.72:57,0,16	0/0:40,0:38:94.85:0,95,1551	0/1:30,0:28:21.47:21,0,33	1/1:34,0:31:0.83:1,1,0	1/1:14,20:32:54.90:688,55,0	0/1:20,0:20:0.79:1,0,132	0/1:17,1:15:29.96:30,0,98	0/1:21,0:13:2.55:3,0,166	0/0:25,0:25:2.45:0,2,53	./.	0/0:45,0:43:0:0,0,0	0/0:26,0:26:51.12:0,51,775	0/0:58,0:56:99:0,120,2036	0/0:29,0:29:2.59:0,3,25	0/1:35,0:35:69.39:69,0,302	0/1:28,0:28:68.65:69,0,145	0/1:11,0:11:20.38:35,0,20
chr10	66060074	.	ACACACT	A	2002.12	PASS	AB=0.972;AC=23;AF=0.442;AN=52;BaseQRankSum=8.581;DP=763;FS=0.000;HRun=0;HaplotypeScore=260.2131;InbreedingCoeff=0.3408;MQ=38.05;MQ0=37;MQRankSum=-8.981;QD=4.62;ReadPosRankSum=-1.082;VQSLOD=1.8679;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:74.59:0,75,2259	1/1:7,0:7:6.49:101,6,0	./.	./.	0/0:12,0:12:27.06:0,27,688	1/1:26,1:25:7.96:75,8,0	0/1:38,1:38:0.35:1,0,0	0/1:21,0:7:24.72:25,0,64	0/0:35,0:32:4.34:0,4,196	0/0:34,0:32:60.99:0,61,1008	0/0:19,0:18:29.58:0,30,374	1/1:35,0:34:9.53:192,10,0	0/0:38,0:36:90.20:0,90,2702	0/1:29,1:28:18.59:48,0,19	1/1:31,3:31:5.65:42,6,0	0/0:35,0:33:57.02:0,57,671	0/1:20,0:20:58.85:59,0,70	0/0:20,0:17:11.55:0,12,225	0/1:20,0:12:61.31:116,0,61	0/1:22,1:23:34.88:35,0,52	0/1:35,0:27:0.07:0,0,0	1/1:41,3:42:0.94:2,1,0	0/0:24,0:24:47.99:0,48,1181	0/0:53,0:50:99:0,120,3753	0/1:24,4:28:0.01:0,0,0	0/1:31,1:32:99:660,0,173	1/1:26,0:26:45.72:598,46,0	1/1:11,0:11:17.17:214,17,0
chr10	66060075	.	C	CAT	952.86	PASS	AB=0.886;AC=16;AF=0.308;AN=52;BaseQRankSum=9.111;DP=756;FS=4.878;HRun=0;HaplotypeScore=237.0460;InbreedingCoeff=0.0038;MQ=38.06;MQ0=38;MQRankSum=-10.047;QD=2.70;ReadPosRankSum=1.593;VQSLOD=1.9657;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:38:75.21:0,75,1079	0/1:6,1:7:0.83:1,0,20	./.	./.	0/0:11,0:11:27.09:0,27,406	1/1:20,6:24:7.65:53,8,0	0/1:28,10:37:1.07:1,0,1	0/1:19,1:7:85.89:86,0,93	0/0:37,0:34:32.38:0,32,347	0/0:35,0:33:83.32:0,83,506	0/0:19,0:19:29.32:0,29,178	0/1:35,0:34:19.08:19,0,44	0/0:37,0:35:97.49:0,97,1397	0/1:24,6:28:7.33:20,0,7	1/1:30,4:31:2.36:9,2,0	0/0:34,0:32:57.98:0,58,352	0/1:16,4:20:84.59:117,0,85	0/0:21,0:18:19.91:0,20,383	0/1:19,1:12:37.27:114,0,37	0/1:22,1:23:8.59:9,0,42	0/1:20,14:25:0.05:0,0,0	0/0:34,10:42:0:0,0,0	0/0:24,0:24:54.10:0,54,724	0/0:53,0:50:99:0,123,1832	0/0:28,0:28:2:0,2,23	0/1:27,4:31:99:348,0,138	0/1:21,4:26:40.78:269,0,41	0/1:9,0:9:12.97:49,0,13
chr10	66060076	.	ACACT	A	1494.92	PASS	AB=0.888;AC=22;AF=0.423;AN=52;BaseQRankSum=9.218;DP=743;FS=4.874;HRun=0;HaplotypeScore=241.4681;InbreedingCoeff=0.2008;MQ=38.34;MQ0=38;MQRankSum=-9.157;QD=3.34;ReadPosRankSum=-0.884;VQSLOD=2.1021;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:77.92:0,78,1836	1/1:5,2:7:6:65,6,0	./.	./.	0/0:11,0:11:26.99:0,27,574	1/1:22,4:24:9.13:106,9,0	0/1:34,2:35:0.31:1,0,0	0/1:20,0:7:12.08:53,0,12	0/1:37,0:34:13.15:13,0,98	0/0:36,0:34:52.87:0,53,519	0/0:21,0:20:19.90:0,20,185	1/1:24,9:32:16.44:170,16,0	0/0:37,0:35:90.76:0,91,2264	0/1:22,8:28:6.81:60,0,7	1/1:25,9:31:5.60:42,6,0	0/0:35,0:33:43.89:0,44,395	0/1:18,1:19:33.33:33,0,98	0/0:21,0:18:0.63:0,1,120	0/1:18,1:12:84.17:84,0,142	0/1:15,8:23:23.98:24,0,59	0/1:32,0:23:0.05:0,0,0	0/1:39,5:42:0:0,0,0	0/0:25,0:25:50.96:0,51,1084	0/0:52,0:49:99:0,123,3133	0/1:18,7:25:0.24:0,0,1	0/1:22,7:29:99:441,0,252	0/1:19,7:26:54.48:373,0,54	1/1:4,3:7:17.96:188,18,0
chr10	66060078	.	A	ACACT	3115.15	PASS	AB=0.841;AC=23;AF=0.442;AN=52;BaseQRankSum=10.532;DP=724;FS=0.976;HRun=0;HaplotypeScore=236.4000;InbreedingCoeff=0.4708;MQ=38.26;MQ0=37;MQRankSum=-10.750;QD=8.75;ReadPosRankSum=-1.966;VQSLOD=2.6802;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:78.03:0,78,1359	1/1:6,1:7:7.84:130,8,0	./.	./.	0/0:11,0:11:27.06:0,27,480	1/1:17,3:23:11.19:121,11,0	0/1:27,5:35:0.80:2,0,1	0/1:18,0:5:12.72:13,0,54	0/0:36,0:33:18.59:0,19,272	0/0:36,0:34:48.28:0,48,769	0/0:21,0:20:35.23:0,35,322	1/1:25,4:31:14.34:303,14,0	0/0:38,0:36:90.10:0,90,1722	1/1:24,2:28:9.66:123,10,0	1/1:28,1:30:6.95:45,7,0	0/0:35,0:33:57.62:0,58,542	0/1:16,0:18:29.92:104,0,30	0/0:19,0:17:26.40:0,26,322	0/1:15,2:12:7.47:297,0,7	0/1:15,7:22:43.16:43,0,56	1/1:32,0:22:2.22:8,2,0	0/0:35,3:42:0:0,0,0	0/0:23,0:23:50.89:0,51,829	0/0:50,0:47:99:0,123,2345	0/1:18,4:24:0.40:1,0,0	0/1:21,3:28:39.90:941,0,40	1/1:19,3:25:46.93:896,47,0	1/1:5,1:7:17.27:265,17,0
chr10	66060080	.	TCA	T	960.68	PASS	AB=0.924;AC=18;AF=0.346;AN=52;BaseQRankSum=8.637;DP=690;FS=14.768;HRun=0;HaplotypeScore=212.6442;InbreedingCoeff=0.1948;MQ=38.39;MQ0=36;MQRankSum=-8.545;QD=3.15;ReadPosRankSum=1.074;VQSLOD=1.5353;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:37:78.19:0,78,1352	1/1:5,0:5:0.70:19,1,0	./.	./.	0/0:11,0:11:21.07:0,21,355	0/1:21,4:23:3.65:26,0,4	0/1:33,1:33:0.15:0,0,0	0/1:20,0:6:20.28:20,0,30	1/1:12,25:34:22.10:337,22,0	0/0:35,0:33:49.16:0,49,416	0/0:21,0:20:31.04:0,31,241	0/1:24,5:28:11.51:56,0,12	0/0:35,0:33:91.86:0,92,1545	0/1:26,2:26:2.47:31,0,2	0/0:29,4:30:2.67:0,3,13	0/0:35,0:33:41.32:0,41,281	0/1:13,3:18:46.36:83,0,46	1/1:14,4:16:16.58:229,17,0	0/1:16,2:10:25.61:26,0,147	0/0:20,1:21:1.03:0,1,38	0/0:30,0:21:2.79:0,3,13	0/0:36,3:38:0:0,0,0	0/0:24,0:24:48.16:0,48,815	0/0:50,0:47:99:0,120,2083	0/1:18,1:19:0.09:0,0,0	0/1:25,1:25:99:115,0,312	0/1:20,1:21:99:109,0,108	1/1:6,0:6:9.82:61,10,0
chr10	66060082	.	A	ACT	824.66	PASS	AB=0.986;AC=22;AF=0.423;AN=52;BaseQRankSum=11.063;DP=695;FS=17.981;HRun=0;HaplotypeScore=218.1622;InbreedingCoeff=0.2397;MQ=38.03;MQ0=36;MQRankSum=-10.792;QD=2.45;ReadPosRankSum=-1.977;VQSLOD=0.6958;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:78.26:0,78,1186	1/1:5,0:5:1.95:5,2,0	./.	./.	0/0:10,0:10:21.07:0,21,321	1/1:24,1:23:8.94:77,9,0	1/1:35,3:37:2:36,2,0	0/1:21,0:7:19.88:20,0,21	0/1:37,0:34:16.44:16,0,67	0/0:33,0:32:88.80:0,89,1308	0/0:21,0:20:38.72:0,39,549	1/1:27,2:29:4.82:61,5,0	0/0:35,0:33:94.55:0,95,1385	1/1:27,1:26:7.75:73,8,0	0/0:29,3:29:1.74:0,2,11	0/0:35,0:33:60.15:0,60,849	1/1:17,1:18:10.81:218,11,0	0/1:18,0:15:26.65:27,0,81	0/1:21,0:13:49.12:49,0,96	0/1:20,1:21:10.30:10,0,33	0/0:33,0:23:2.44:0,2,10	0/0:38,2:38:0:0,0,0	0/0:23,0:23:48.16:0,48,724	0/0:49,0:46:99:0,120,1835	0/1:18,0:18:0.25:1,0,0	0/1:27,2:28:99:238,0,109	0/1:21,0:21:30.74:90,0,31	1/1:5,1:6:11.06:65,11,0
chr10	66060094	.	ACACT	A	360.28	PASS	AB=0.995;AC=14;AF=0.259;AN=54;BaseQRankSum=7.102;DP=694;FS=8.695;HRun=0;HaplotypeScore=214.9850;InbreedingCoeff=0.0232;MQ=39.75;MQ0=33;MQRankSum=-7.230;QD=1.26;ReadPosRankSum=-0.384;VQSLOD=1.7279;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:92.69:0,93,2148	0/1:4,0:4:0.53:21,0,1	0/0:4,0:3:8.62:0,9,100	./.	0/0:8,0:8:18.06:0,18,452	1/1:23,0:21:2.15:14,2,0	0/0:34,0:34:1.67:0,2,12	0/0:24,0:8:12.59:0,13,98	0/0:35,0:32:25.93:0,26,267	0/0:34,0:34:92.33:0,92,2022	0/0:20,0:19:36.11:0,36,815	0/1:35,0:34:42.03:51,0,42	0/0:33,0:32:84.70:0,85,2003	0/1:29,0:27:18.94:19,0,58	0/1:32,0:28:8.52:9,0,18	0/0:33,0:32:57.03:0,57,1349	0/0:16,1:17:12.54:0,13,99	0/1:15,1:13:12.87:85,0,13	0/1:19,0:13:4.37:4,0,307	0/1:19,0:19:0.52:1,0,1	0/0:33,3:26:2.08:0,2,9	0/1:35,0:33:0:0,0,0	0/0:21,0:21:44.51:0,45,1011	0/0:56,0:53:99:0,111,2911	0/1:17,0:17:0.24:0,0,1	0/1:29,0:28:99:102,0,527	0/1:23,0:22:99:137,0,155	0/1:5,0:5:32.68:50,0,33
chr10	66060106	.	ACTCACT	A	501.77	PASS	AB=0.979;AC=12;AF=0.214;AN=56;BaseQRankSum=7.682;DP=678;FS=0.000;HRun=0;HaplotypeScore=212.0217;InbreedingCoeff=-0.0155;MQ=39.62;MQ0=36;MQRankSum=-8.496;QD=2.50;ReadPosRankSum=-3.378;VQSLOD=1.7184;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,102,2800	0/1:7,0:7:10.90:11,0,132	0/0:11,0:5:12.04:0,12,280	0/0:31,0:4:5.70:0,6,73	0/0:8,0:8:21.03:0,21,524	1/1:16,0:15:1.32:9,1,0	0/1:24,3:26:1.46:1,0,1	0/0:32,0:11:18.78:0,19,292	0/0:37,0:34:9.39:0,9,194	0/0:32,0:32:86.04:0,86,2560	0/0:20,0:19:42.13:0,42,1191	0/1:30,1:30:61.84:62,0,76	0/0:33,0:32:88.61:0,89,2579	0/1:27,0:25:5.76:6,0,32	0/0:28,1:26:2.20:0,2,59	0/0:31,0:31:60.83:0,61,1691	0/1:18,0:17:3.06:3,0,88	0/1:11,0:9:7.89:69,0,8	0/1:15,0:10:19.80:20,0,271	0/0:18,0:17:1.70:0,2,4	0/0:33,0:25:1.75:0,2,8	0/0:28,0:26:0:0,0,0	0/0:21,0:20:45.12:0,45,1338	0/0:54,0:51:99:0,135,3888	0/0:15,0:15:0.24:0,0,0	0/1:25,0:23:99:204,0,442	0/1:19,0:18:99:197,0,191	0/1:4,0:4:48.05:49,0,48
chr10	66060123	.	C	CAT	2011.56	PASS	AB=0.745;AC=17;AF=0.304;AN=56;BaseQRankSum=8.707;DP=661;FS=24.273;HRun=0;HaplotypeScore=193.8183;InbreedingCoeff=0.1805;MQ=40.65;MQ0=41;MQRankSum=-10.355;QD=7.03;ReadPosRankSum=-0.807;VQSLOD=1.4401;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:82.85:0,83,1358	1/1:2,5:7:14.73:240,15,0	0/0:25,0:7:11.78:0,12,222	0/0:45,0:4:6.34:0,6,55	0/0:11,0:11:33.02:0,33,382	0/0:3,7:9:0.95:0,1,3	0/1:17,12:28:0.11:0,0,1	0/1:20,8:16:89.65:406,0,90	0/0:34,0:33:20.67:0,21,185	0/0:30,0:30:87.26:0,87,1268	0/0:25,0:23:57.13:0,57,798	0/1:8,19:27:6.03:102,0,6	0/0:34,0:33:84.16:0,84,1215	0/1:15,7:23:24.27:24,0,32	1/1:14,11:21:6.46:84,6,0	0/0:33,0:33:69.23:0,69,1052	0/1:11,4:14:45.54:119,0,46	0/1:8,0:5:0.19:25,0,0	0/1:10,4:10:79.78:180,0,80	0/1:10,9:18:0.04:1,0,0	0/1:21,4:20:0.24:0,0,0	0/1:12,10:20:0.03:0,0,0	0/0:22,0:21:51.12:0,51,715	0/0:53,0:50:99:0,135,1967	0/0:11,0:11:2.88:0,3,15	0/1:10,11:20:61.92:572,0,62	0/1:5,13:17:25.88:326,0,26	0/1:4,1:4:0.13:80,0,0
chr10	66060126	.	ACT	A	344.68	PASS	AB=1.000;AC=16;AF=0.286;AN=56;BaseQRankSum=8.545;DP=648;FS=5.330;HRun=0;HaplotypeScore=188.2792;InbreedingCoeff=0.2333;MQ=40.66;MQ0=44;MQRankSum=-8.539;QD=1.54;ReadPosRankSum=1.688;VQSLOD=2.3107;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,102,1724	1/1:7,0:7:1.93:57,2,0	0/0:29,0:7:20.73:0,21,252	0/0:50,0:4:8.05:0,8,77	0/0:11,0:11:32.90:0,33,415	0/1:9,0:8:0.01:0,0,1	0/1:28,0:27:0.55:1,0,1	0/0:26,0:17:38.81:0,39,364	1/1:17,16:32:5.30:130,5,0	0/0:31,0:31:90.01:0,90,1240	0/0:23,0:21:55.48:0,55,554	0/0:26,0:26:8.67:0,9,60	0/0:33,0:32:84.04:0,84,1390	0/1:20,0:20:11.39:22,0,11	0/1:25,0:20:7.28:31,0,7	0/0:35,0:35:69:0,69,848	0/1:13,0:12:1.23:1,0,66	0/0:8,0:5:4.44:0,4,34	0/1:14,0:10:26.36:26,0,51	0/0:17,0:17:2.60:0,3,11	0/0:19,0:15:0:0,0,0	0/1:21,0:19:0.03:0,0,0	0/0:21,0:20:52.85:0,53,771	0/0:53,0:50:99:0,135,2304	0/1:10,0:10:0.24:0,0,1	0/1:22,0:20:99:112,0,122	0/1:17,0:16:58.79:67,0,59	1/1:4,0:4:2.70:32,3,0
chr10	66060134	.	ACT	A	1657.33	PASS	AB=0.983;AC=33;AF=0.611;AN=54;BaseQRankSum=11.613;DP=617;FS=0.444;HRun=0;HaplotypeScore=165.2758;InbreedingCoeff=0.5099;MQ=41.49;MQ0=44;MQRankSum=-3.848;QD=4.95;ReadPosRankSum=3.351;VQSLOD=3.1305;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,105,1596	1/1:6,0:6:11.83:77,12,0	0/0:32,0:7:12.49:0,12,150	0/0:55,0:5:4.88:0,5,93	0/0:10,0:10:30.09:0,30,496	0/1:6,0:6:0.02:0,0,0	1/1:26,0:25:3.75:22,4,0	0/1:25,0:16:70.08:70,0,85	0/1:29,3:31:17.51:102,0,18	0/1:30,0:30:58.19:197,0,58	1/1:22,0:21:52.25:306,52,0	1/1:24,0:24:0.96:15,1,0	0/0:32,0:31:81.63:0,82,1189	1/1:16,1:17:5.56:30,6,0	1/1:20,0:15:5.01:28,5,0	1/1:36,0:36:9.62:254,10,0	1/1:10,1:10:7.95:44,8,0	1/1:6,1:4:6.97:36,7,0	1/1:11,0:8:17.81:119,18,0	0/1:14,0:13:0.08:0,0,0	./.	0/0:19,0:18:2.58:0,3,10	0/0:18,0:17:47.96:0,48,749	0/0:55,1:53:99:0,109,1905	1/1:6,0:7:2.90:16,3,0	1/1:18,1:17:44.14:304,44,0	1/1:17,0:15:22.93:156,23,0	1/1:5,0:4:8.89:60,9,0
chr10	66060138	.	TCTCA	T	2355.26	PASS	AB=0.735;AC=29;AF=0.537;AN=54;BaseQRankSum=10.850;DP=596;FS=8.966;HRun=0;HaplotypeScore=163.6336;InbreedingCoeff=0.5245;MQ=42.45;MQ0=41;MQRankSum=-10.039;QD=9.69;ReadPosRankSum=-1.395;VQSLOD=2.0836;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,111,2561	1/1:0,5:5:14.92:204,15,0	0/0:31,0:6:11.07:0,11,215	0/0:53,0:5:11.71:0,12,185	0/0:11,0:11:33.09:0,33,853	0/1:3,2:5:0.08:0,0,0	1/1:9,15:23:8.12:108,8,0	0/1:23,2:17:68.10:68,0,106	0/1:18,13:30:16.96:196,0,17	0/0:32,0:32:59.52:0,60,432	0/0:23,0:22:50.07:0,50,232	1/1:8,13:21:7.54:89,8,0	0/0:31,0:31:87.22:0,87,2005	1/1:6,8:14:3.01:33,3,0	1/1:5,10:12:5.03:49,5,0	0/0:38,0:38:52.80:0,53,346	0/1:8,3:10:26.36:68,0,26	1/1:7,0:4:0.25:40,0,0	1/1:7,4:7:1.50:239,2,0	0/1:2,10:11:0:0,0,0	./.	1/1:9,8:16:4.56:47,5,0	0/0:18,0:18:48.13:0,48,1225	0/0:57,0:54:99:0,118,3219	1/1:3,4:7:2.99:39,3,0	1/1:4,14:17:34.46:776,34,0	1/1:3,13:15:26.04:479,26,0	1/1:2,2:3:4.95:99,5,0
chr10	66060140	.	TCA	T	4191.64	PASS	AB=0.959;AC=33;AF=0.635;AN=52;BaseQRankSum=11.303;DP=605;FS=2.047;HRun=0;HaplotypeScore=148.6228;InbreedingCoeff=0.5167;MQ=43.07;MQ0=43;MQRankSum=-3.049;QD=12.26;ReadPosRankSum=0.860;VQSLOD=3.6945;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:95.99:0,96,1511	1/1:5,0:5:11.91:132,12,0	0/0:29,1:5:11.57:0,12,121	0/0:51,0:5:4.56:0,5,73	0/0:12,0:12:36.07:0,36,560	./.	1/1:24,0:23:9.73:79,10,0	0/1:20,7:17:24.14:235,0,24	0/1:31,0:30:10.43:94,0,10	1/1:6,26:32:69.17:883,69,0	1/1:1,24:24:41.19:702,41,0	1/1:21,0:21:8.63:73,9,0	0/0:33,0:33:72.18:0,72,1167	1/1:14,1:15:2.42:39,2,0	1/1:18,0:14:5.84:63,6,0	1/1:2,37:39:65.57:825,66,0	0/1:12,0:11:9.81:10,0,25	1/1:7,1:4:1.16:45,1,0	1/1:12,0:7:11.92:106,12,0	0/1:12,0:11:0:0,0,0	./.	0/1:16,0:15:1.66:37,0,2	0/0:22,0:22:57.11:0,57,850	0/0:55,0:52:99:0,126,1990	1/1:8,0:8:2.61:24,3,0	1/1:17,1:17:50.77:513,51,0	1/1:15,0:13:26.25:257,26,0	1/1:4,0:3:6:75,6,0
chr10	66060156	.	TCACACA	T	302.40	PASS	AB=1.000;AC=4;AF=0.074;AN=54;BaseQRankSum=5.287;DP=680;FS=2.128;HRun=0;HaplotypeScore=216.0219;InbreedingCoeff=0.2892;MQ=43.18;MQ0=33;MQRankSum=-4.085;QD=5.71;ReadPosRankSum=-1.154;VQSLOD=2.5271;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,108,3029	0/0:8,0:8:17.37:0,17,117	0/0:19,0:3:5.96:0,6,45	0/0:34,0:4:5.17:0,5,107	0/0:15,0:15:42.11:0,42,1250	./.	0/0:29,0:28:10.73:0,11,79	0/0:31,0:21:32.73:0,33,375	1/1:19,11:32:16.60:379,17,0	0/0:36,0:35:96.19:0,96,1880	0/0:29,0:28:69.23:0,69,1473	0/0:24,0:24:6.23:0,6,137	0/0:33,0:33:85.46:0,85,2291	0/0:22,0:23:13.96:0,14,114	0/0:27,0:24:11.83:0,12,104	0/0:39,0:39:68.99:0,69,1452	0/0:18,0:18:9.04:0,9,125	0/1:9,0:7:23.56:24,0,27	0/0:20,0:13:36.10:0,36,297	0/0:15,0:13:9.02:0,9,94	0/0:26,0:19:5.95:0,6,47	0/0:19,0:19:6.46:0,6,87	0/0:25,0:25:69.17:0,69,1813	0/0:53,0:53:99:0,135,3806	0/1:10,0:10:3.43:3,0,51	0/0:28,0:27:59.48:0,59,552	0/0:21,0:19:7.95:0,8,125	0/0:5,0:4:6.01:0,6,75
chr10	66060162	.	A	ACT	809.97	PASS	AB=0.952;AC=29;AF=0.518;AN=56;BaseQRankSum=12.766;DP=707;FS=6.195;HRun=0;HaplotypeScore=187.1009;InbreedingCoeff=0.4967;MQ=45.40;MQ0=30;MQRankSum=-9.715;QD=2.17;ReadPosRankSum=-0.802;VQSLOD=2.0155;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:93.28:0,93,1647	1/1:8,0:8:14.81:56,15,0	0/0:26,0:9:20.35:0,20,157	0/0:35,0:9:14.21:0,14,204	0/0:19,0:19:51.07:0,51,668	0/1:8,0:8:0:0,0,0	1/1:27,0:26:5.88:24,6,0	0/1:29,0:18:37.15:129,0,37	1/1:38,0:36:6.62:118,7,0	0/0:37,0:36:96.11:0,96,1355	0/0:30,0:29:69.23:0,69,1051	1/1:27,0:27:13.41:43,13,0	0/0:31,0:31:88.51:0,89,1301	1/1:24,0:24:2.71:31,3,0	1/1:28,0:25:10.56:50,11,0	0/0:37,0:37:69.23:0,69,1049	1/1:19,0:19:13.85:43,14,0	0/1:5,5:8:8.21:35,0,8	0/1:21,0:12:74.63:75,0,76	1/1:16,0:14:7.25:28,7,0	0/1:27,0:22:9.21:9,0,10	0/1:19,0:19:2.78:27,0,3	0/0:25,0:25:69.20:0,69,1011	0/0:51,0:51:99:0,138,2016	1/1:10,0:10:8.09:37,8,0	0/1:33,0:31:99:156,0,129	1/1:24,0:22:16.87:84,17,0	1/1:5,0:4:11.09:60,11,0
chr10	66060166	.	ACT	A	4169.88	PASS	AB=0.712;AC=30;AF=0.536;AN=56;BaseQRankSum=10.012;DP=720;FS=1.283;HRun=0;HaplotypeScore=173.4418;InbreedingCoeff=0.5467;MQ=47.88;MQ0=25;MQRankSum=-9.672;QD=11.33;ReadPosRankSum=-2.215;VQSLOD=3.3455;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,123,2027	1/1:0,8:8:17.98:272,18,0	0/1:27,0:9:42.77:43,0,63	0/0:32,0:11:9.51:0,10,162	0/0:19,0:19:51:0,51,777	0/0:1,8:9:0.47:0,0,1	1/1:11,16:26:20.52:213,21,0	1/1:23,9:21:15.67:501,16,0	0/0:38,0:37:0.31:0,0,114	0/0:37,0:36:99:0,99,1548	0/0:29,0:28:75.13:0,75,1160	1/1:3,26:29:16.83:270,17,0	0/0:31,0:31:88.46:0,88,1521	1/1:3,19:23:12.93:184,13,0	1/1:2,29:29:14.88:200,15,0	0/0:33,0:33:71.87:0,72,1080	0/1:4,17:21:12.89:257,0,13	1/1:8,0:7:1.30:5,1,0	0/1:13,9:15:68.57:349,0,69	1/1:0,16:14:8.95:136,9,0	1/1:8,23:26:5.95:63,6,0	1/1:5,13:18:0.99:127,1,0	0/0:25,0:25:69.15:0,69,1149	0/0:53,0:53:99:0,144,2500	1/1:0,10:10:8.44:136,8,0	0/1:10,24:32:99:788,0,100	1/1:4,22:25:22.55:444,23,0	1/1:0,4:4:12.04:182,12,0
chr10	66060523	.	CCCCA	C	91.15	PASS	AB=0.667;AC=1;AF=0.018;AN=56;BaseQRankSum=-1.548;DP=209;FS=20.111;HRun=0;HaplotypeScore=61.5013;InbreedingCoeff=-0.0465;MQ=79.55;MQ0=0;MQRankSum=-1.591;QD=11.39;ReadPosRankSum=-1.037;VQSLOD=0.3439;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:30.57:0,31,691	0/0:2,0:2:3.01:0,3,77	0/0:7,0:5:14.92:0,15,281	0/0:11,0:11:30.06:0,30,586	0/0:6,0:6:15.05:0,15,379	0/0:8,0:8:15.05:0,15,329	0/0:5,0:5:6.49:0,6,135	0/1:4,4:8:99:165,0,211	0/0:8,0:8:16.30:0,16,355	0/0:14,0:14:30.09:0,30,724	0/0:3,0:3:9.03:0,9,229	0/0:7,0:7:15.04:0,15,339	0/0:4,0:4:12.04:0,12,283	0/0:5,0:5:12.04:0,12,304	0/0:6,0:6:15.05:0,15,375	0/0:2,0:2:6.02:0,6,134	0/0:12,0:12:36.11:0,36,877	0/0:8,0:8:18.06:0,18,421	0/0:13,0:13:36.12:0,36,919	0/0:6,0:6:9.03:0,9,232	0/0:13,0:12:15.46:0,15,364	0/0:5,0:5:12.04:0,12,303	0/0:8,0:8:18.06:0,18,420	0/0:8,0:8:21.06:0,21,480	0/0:7,0:7:15.05:0,15,378	0/0:9,0:9:21.06:0,21,487	0/0:5,0:5:12.04:0,12,298	0/0:7,0:7:15.05:0,15,388
chr10	66061233	.	G	GAT	661.08	PASS	AB=1.000;AC=19;AF=0.380;AN=50;BaseQRankSum=3.192;DP=155;FS=0.000;HRun=0;HaplotypeScore=51.6789;InbreedingCoeff=0.1929;MQ=47.77;MQ0=19;MQRankSum=-0.749;QD=8.37;ReadPosRankSum=2.404;VQSLOD=3.0142;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:7:3.55:0,4,7	0/0:3,0:3:0.94:0,1,2	0/0:13,0:4:0.09:0,0,16	0/1:14,0:3:0:0,0,0	0/0:2,0:2:1.36:0,1,3	./.	0/1:10,0:10:36.94:38,0,37	./.	0/1:7,0:7:0.16:41,0,0	1/1:1,0:1:3.01:44,3,0	0/0:2,0:1:0.47:0,0,1	0/1:9,0:9:1.50:25,0,2	0/0:7,0:5:1.89:0,2,3	0/0:8,0:7:0.84:0,1,2	0/0:8,0:6:2.83:0,3,6	0/0:3,0:3:1.41:0,1,2	0/1:5,0:5:22.03:57,0,22	0/1:5,0:2:35.83:45,0,36	1/1:2,0:1:3.01:38,3,0	./.	0/0:4,5:8:1.95:0,2,9	0/0:4,0:4:2.50:0,2,6	0/1:1,0:1:0:0,0,0	1/1:8,0:8:2.55:7,3,0	0/0:5,0:5:3.23:0,3,9	1/1:6,0:6:14.56:220,15,0	1/1:4,0:4:5.05:84,5,0	1/1:7,0:4:12.04:177,12,0
chr10	66061235	.	G	GAT	521	PASS	AB=0.659;AC=15;AF=0.300;AN=50;BaseQRankSum=6.866;DP=157;FS=2.268;HRun=0;HaplotypeScore=51.4826;InbreedingCoeff=0.2265;MQ=51.66;MQ0=19;MQRankSum=-0.456;QD=8.27;ReadPosRankSum=0.684;VQSLOD=3.2073;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:4,4:7:15.46:0,15,128	0/0:0,3:3:6.47:0,6,52	0/0:13,0:4:0.13:0,0,27	0/1:15,0:4:0:0,0,0	0/0:0,2:2:5.99:0,6,50	./.	0/1:3,7:10:15.25:15,0,193	./.	0/1:3,4:7:32.47:32,0,109	1/1:0,1:1:3.01:54,3,0	0/0:1,1:1:3:0,3,29	0/0:0,9:9:20.31:0,20,202	0/0:3,4:5:11.52:0,12,100	0/0:4,4:7:11.02:0,11,102	0/0:2,6:6:17.99:0,18,154	0/0:1,2:3:6.46:0,6,50	0/1:1,4:5:7.60:8,0,45	0/1:4,1:2:35.83:42,0,36	1/1:2,0:1:2.90:16,3,0	./.	0/0:6,3:8:4.88:0,5,50	0/0:1,3:4:12:0,12,107	0/1:0,1:1:0:0,0,0	0/0:2,7:9:3.37:0,3,19	0/0:1,4:5:11.99:0,12,104	1/1:1,5:6:16.87:272,17,0	0/1:0,4:4:39.26:95,0,39	1/1:3,4:4:11.80:128,12,0
chr10	66061245	.	G	GAC	2826.06	PASS	AB=0.711;AC=42;AF=0.913;AN=46;BaseQRankSum=0.274;DP=153;FS=20.205;HRun=0;HaplotypeScore=34.6967;InbreedingCoeff=0.0586;MQ=32.38;MQ0=18;MQRankSum=-2.199;QD=22.98;ReadPosRankSum=0.334;VQSLOD=1.5153;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,4:7:14.50:169,15,0	1/1:0,3:3:9.02:90,9,0	./.	0/0:15,0:3:2.37:0,2,8	1/1:0,2:2:6.02:68,6,0	./.	0/1:3,7:10:10.44:255,0,10	./.	1/1:2,4:6:18.05:218,18,0	1/1:0,1:1:3.01:54,3,0	1/1:1,1:1:2.99:24,3,0	1/1:0,9:9:27.07:298,27,0	1/1:3,4:5:11.64:138,12,0	1/1:3,5:7:15.51:167,16,0	1/1:2,6:6:18.05:204,18,0	1/1:1,2:3:6.02:70,6,0	1/1:0,4:4:8.77:102,9,0	0/1:4,1:2:34.98:47,0,35	1/1:2,0:1:3.01:36,3,0	./.	1/1:6,3:8:8.96:99,9,0	1/1:2,3:5:12.01:124,12,0	./.	1/1:2,7:9:2.67:21,3,0	1/1:1,4:5:12.03:133,12,0	1/1:1,5:6:2.97:254,3,0	1/1:0,4:4:12.04:175,12,0	1/1:3,4:4:12.04:182,12,0
chr10	66062096	.	A	AT	858.39	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-7.935;DP=618;FS=2.369;HRun=9;HaplotypeScore=88.4185;InbreedingCoeff=0.8937;MQ=74.81;MQ0=0;MQRankSum=-0.094;QD=25.25;ReadPosRankSum=-4.805;VQSLOD=1.8988;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,117,1007	0/0:12,0:12:29.97:0,30,260	0/0:13,0:13:5.52:0,6,135	0/0:13,0:12:23.47:0,23,179	0/0:25,0:25:59.06:0,59,506	0/0:17,0:17:44.91:0,45,384	0/0:23,0:23:56.91:0,57,492	1/1:5,29:34:87.22:953,87,0	0/0:23,0:23:62.90:0,63,532	0/0:26,0:26:65.98:0,66,573	0/0:18,0:18:44.97:0,45,384	0/0:22,0:22:62.97:0,63,547	0/0:14,0:14:32.97:0,33,286	0/0:16,0:16:38.93:0,39,335	0/0:28,0:27:77.92:0,78,668	0/0:21,0:21:59.97:0,60,517	0/0:22,0:21:59.99:0,60,521	0/0:23,0:23:56.91:0,57,484	0/0:24,0:24:65.90:0,66,568	0/0:26,0:26:74.97:0,75,651	0/0:36,0:36:89.90:0,90,781	0/0:18,0:18:44.92:0,45,383	0/0:19,0:19:44.94:0,45,383	0/0:30,0:30:77.94:0,78,666	0/0:15,0:15:35.95:0,36,312	0/0:20,0:20:53.91:0,54,465	0/0:26,0:25:68.89:0,69,590	0/0:9,0:9:26.99:0,27,234
chr10	66062651	.	AGT	A	5159.27	PASS	AB=0.517;AC=29;AF=0.537;AN=54;BaseQRankSum=17.662;DP=491;FS=4.927;HRun=0;HaplotypeScore=178.9856;InbreedingCoeff=0.9038;MQ=102.96;MQ0=0;MQRankSum=-17.463;QD=33.72;ReadPosRankSum=7.206;VQSLOD=6.0483;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,123,2477	1/1:0,6:6:18.05:203,18,0	0/0:36,0:36:99:0,108,1935	0/0:29,0:29:78.40:0,78,1425	0/0:26,0:26:75.24:0,75,1471	1/1:0,3:3:9.03:105,9,0	1/1:0,9:9:27.08:303,27,0	./.	0/0:26,0:26:78.25:0,78,1534	0/0:31,0:31:90.30:0,90,1794	0/0:20,0:20:60.21:0,60,1219	1/1:0,18:18:53.81:576,54,0	0/0:27,0:27:78.27:0,78,1562	1/1:0,10:10:30.08:331,30,0	1/1:0,16:16:48.13:525,48,0	0/0:25,0:25:75.26:0,75,1508	1/1:0,11:11:33.04:362,33,0	0/0:23,0:23:69.18:0,69,1323	1/1:0,9:9:27.09:358,27,0	1/1:0,20:20:60.16:672,60,0	1/1:0,3:3:9.02:102,9,0	1/1:0,11:11:33.09:359,33,0	0/0:29,0:29:87.30:0,87,1733	0/0:25,0:25:69.24:0,69,1401	1/1:1,3:4:12.04:147,12,0	0/1:1,14:15:15.85:478,0,16	1/1:0,12:12:36.11:430,36,0	1/1:1,5:6:18.03:208,18,0
chr10	66062655	.	C	CATAAATACACA	41609.02	PASS	AB=0.641;AC=31;AF=0.554;AN=56;BaseQRankSum=20.307;DP=633;FS=0.938;HRun=0;HaplotypeScore=266.0164;InbreedingCoeff=0.9263;MQ=92.32;MQ0=0;MQRankSum=-20.705;QD=139.16;ReadPosRankSum=2.106;VQSLOD=5.2325;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,117,4350	1/1:1,6:7:21.07:1080,21,0	0/0:36,0:36:99:0,105,3318	0/0:30,0:30:78.27:0,78,2577	0/0:25,0:25:72.25:0,72,2661	1/1:7,3:10:30.10:1321,30,0	1/1:14,9:23:63.22:3181,63,0	1/1:23,0:23:66.18:2918,66,0	0/0:26,0:26:75.26:0,75,2765	0/0:30,0:30:90.31:0,90,3297	0/0:20,0:20:60.21:0,60,2236	1/1:9,18:27:78.27:3875,78,0	0/0:25,0:25:72.25:0,72,2655	1/1:8,10:18:51.17:2566,51,0	1/1:7,16:23:66.23:3430,66,0	0/0:25,0:25:75.24:0,75,2674	1/1:8,11:19:57.17:2653,57,0	0/0:24,0:24:72.21:0,72,2463	1/1:14,9:23:63.22:3018,63,0	1/1:8,20:28:75.24:3723,75,0	1/1:5,3:8:21.07:1085,21,0	1/1:13,11:24:66.23:3113,66,0	0/0:29,0:29:87.28:0,87,3087	0/0:25,0:25:72.25:0,72,2592	1/1:9,3:12:36.12:1662,36,0	0/1:11,14:25:36.61:3729,0,37	1/1:9,12:21:57.20:2948,57,0	1/1:2,5:8:24.08:1307,24,0
chr10	66064107	.	A	AAC	24206.13	PASS	AB=0.933;AC=37;AF=0.661;AN=56;BaseQRankSum=-16.959;DP=944;FS=5.850;HRun=0;HaplotypeScore=122.9722;InbreedingCoeff=0.9092;MQ=61.71;MQ0=3;MQRankSum=0.071;QD=38.73;ReadPosRankSum=-0.972;VQSLOD=6.2934;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,135,1682	1/1:1,14:15:39.13:683,39,0	0/1:13,0:5:42.43:42,0,47	0/0:22,0:10:8.35:0,8,213	0/0:23,0:23:66.22:0,66,893	1/1:1,37:38:93.32:1581,93,0	1/1:4,27:31:75.24:1265,75,0	1/1:7,48:55:99:2354,141,0	1/1:2,30:35:75.13:1278,75,0	0/0:43,0:43:99:0,120,1609	0/0:28,0:28:72.20:0,72,952	1/1:5,31:36:75.25:1259,75,0	0/0:45,1:46:73.81:0,74,1580	1/1:8,36:44:93.31:1543,93,0	1/1:6,46:53:99:1877,108,0	0/0:42,0:42:99:0,117,1528	1/1:1,24:25:66.22:1124,66,0	1/1:2,16:18:41.35:691,41,0	1/1:3,10:13:33.11:568,33,0	1/1:1,26:27:72.16:1223,72,0	1/1:6,93:101:99:3984,232,0	1/1:0,24:24:63.21:1071,63,0	0/0:24,0:24:72.22:0,72,957	0/0:43,0:43:99:0,108,1461	1/1:1,13:14:33.11:578,33,0	1/1:5,37:41:62.24:1677,62,0	1/1:4,21:24:60.21:1038,60,0	1/1:5,8:13:21.07:368,21,0
chr10	66064224	.	GCACACACA	G	7417.84	PASS	AB=0.734;AC=26;AF=0.464;AN=56;BaseQRankSum=9.428;DP=824;FS=28.670;HRun=0;HaplotypeScore=221.2357;InbreedingCoeff=0.5709;MQ=59.43;MQ0=17;MQRankSum=-10.519;QD=18.32;ReadPosRankSum=-1.224;VQSLOD=2.7898;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:53:72.67:0,73,2371	1/1:5,5:10:15.05:378,15,0	0/0:43,0:16:2.97:0,3,20	0/0:50,0:25:3.01:0,3,39	0/0:20,0:22:45.15:0,45,1750	0/1:10,11:23:18.73:393,0,19	1/1:18,15:34:23.95:525,24,0	0/0:40,0:40:14.11:0,14,117	1/1:16,2:27:23.63:308,24,0	0/0:27,0:29:57.16:0,57,1703	0/0:13,0:14:21.07:0,21,726	1/1:13,11:25:27.06:606,27,0	0/0:38,0:39:75.22:0,75,2722	1/1:8,9:19:11.10:529,11,0	1/1:19,8:28:21.21:579,21,0	0/0:26,0:33:54.10:0,54,1580	0/1:21,4:25:2.96:410,0,3	0/0:17,0:19:36.12:0,36,1251	1/1:14,1:19:3.92:280,4,0	0/1:10,8:18:1.36:340,0,1	0/1:54,4:60:60.51:291,0,61	0/1:11,14:26:7.30:302,0,7	0/0:22,0:23:42.12:0,42,1471	0/0:49,0:52:96.21:0,96,2743	1/1:14,11:26:29.91:736,30,0	1/1:8,18:25:35.94:1027,36,0	0/1:11,8:19:5.88:340,0,6	1/1:2,9:13:17.58:374,18,0
chr10	66064623	.	CAAAA	C	5322.97	PASS	AB=0.663;AC=33;AF=0.589;AN=56;BaseQRankSum=11.904;DP=532;FS=11.818;HRun=17;HaplotypeScore=128.7949;InbreedingCoeff=0.7725;MQ=65.62;MQ0=1;MQRankSum=-12.902;QD=16.23;ReadPosRankSum=6.594;VQSLOD=0.8732;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:34:87.26:0,87,1556	1/1:2,3:6:10.22:117,10,0	0/0:30,0:17:18.72:0,19,162	0/0:10,0:5:8.86:0,9,112	0/0:18,0:22:51.16:0,51,972	1/1:8,11:19:23.66:303,24,0	0/1:7,6:13:8.10:169,0,8	0/0:10,0:27:34.07:0,34,393	1/1:9,0:27:47.41:372,47,0	0/1:12,0:26:4.80:5,0,218	0/0:7,0:15:20.69:0,21,137	1/1:4,14:19:34.06:437,34,0	0/0:17,0:19:42.14:0,42,801	1/1:7,11:19:32.69:401,33,0	1/1:7,11:19:33.98:420,34,0	0/0:5,0:19:21.68:0,22,148	1/1:10,8:19:17.63:213,18,0	1/1:2,0:7:14.90:116,15,0	1/1:8,16:26:50.66:614,51,0	1/1:6,13:22:32.43:404,32,0	1/1:6,7:14:5.49:75,5,0	1/1:7,15:23:41.72:517,42,0	0/0:11,0:13:24.08:0,24,446	0/0:10,0:14:33.01:0,33,489	1/1:6,10:17:24.98:306,25,0	0/1:9,6:19:10.60:175,0,11	1/1:9,15:25:42.85:541,43,0	1/1:1,6:8:13.24:137,13,0
chr10	66064800	.	C	CA	8284.51	PASS	AB=0.968;AC=33;AF=0.589;AN=56;BaseQRankSum=9.683;DP=584;FS=14.168;HRun=8;HaplotypeScore=82.6775;InbreedingCoeff=0.9382;MQ=64.60;MQ0=2;MQRankSum=-1.117;QD=23.60;ReadPosRankSum=0.613;VQSLOD=4.2057;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:53.44:0,53,662	1/1:1,6:7:18.05:208,18,0	0/0:24,0:15:37.92:0,38,301	0/1:29,0:19:6.04:6,0,101	0/0:17,0:17:45.02:0,45,412	1/1:0,21:21:54.03:603,54,0	1/1:2,8:10:17.92:188,18,0	1/1:7,26:33:78.13:841,78,0	0/0:21,0:21:57.02:0,57,521	0/0:24,0:24:69.03:0,69,626	0/0:27,0:27:75.01:0,75,682	1/1:1,10:11:23.94:255,24,0	0/0:21,0:21:57.03:0,57,522	1/1:2,22:24:51.15:587,51,0	1/1:2,15:17:42.12:484,42,0	0/0:17,0:17:48.02:0,48,439	1/1:2,26:28:33.53:631,34,0	0/0:17,0:17:48.02:0,48,439	1/1:7,17:23:48.13:544,48,0	1/1:3,25:28:41.67:678,42,0	1/1:2,12:14:33.10:381,33,0	1/1:1,15:17:51.15:581,51,0	0/0:22,0:22:60.02:0,60,544	0/0:14,0:14:30.01:0,30,275	1/1:1,25:26:60.04:672,60,0	1/1:4,25:29:75.06:831,75,0	1/1:4,18:22:39.12:450,39,0	1/1:0,10:10:30.09:346,30,0
chr10	66065439	.	G	GCCTCT	1180.33	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.504;DP=626;FS=3.470;HRun=0;HaplotypeScore=119.9668;InbreedingCoeff=0.9966;MQ=90.75;MQ0=0;MQRankSum=-5.360;QD=73.77;ReadPosRankSum=-3.734;VQSLOD=4.3594;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:84.25:0,84,1860	0/0:10,0:10:24.08:0,24,559	0/0:36,0:36:99:0,102,2234	0/0:20,0:20:54.16:0,54,1170	0/0:21,0:21:54.19:0,54,1256	0/0:17,0:17:48.16:0,48,1119	0/0:23,0:23:69.24:0,69,1581	1/1:7,7:16:48.16:1275,48,0	0/0:25,0:25:75.24:0,75,1658	0/0:26,0:26:75.26:0,75,1715	0/0:13,0:13:36.12:0,36,805	0/0:20,0:20:60.21:0,60,1377	0/0:23,0:23:63.22:0,63,1448	0/0:27,0:27:78.27:0,78,1815	0/0:26,0:26:72.25:0,72,1657	0/0:23,0:23:66.23:0,66,1538	0/0:32,0:32:96.33:0,96,2231	0/0:17,0:17:51.18:0,51,1167	0/0:18,0:18:50.50:0,51,1186	0/0:21,0:21:60.21:0,60,1368	0/0:41,0:41:99:0,120,2747	0/0:19,0:19:51.16:0,51,1113	0/0:11,0:11:33.11:0,33,711	0/0:23,0:23:69.24:0,69,1608	0/0:18,0:18:48.16:0,48,1093	0/0:29,0:29:81.27:0,81,1833	0/0:33,0:33:93.32:0,93,2142	0/0:9,0:9:27.09:0,27,629
chr10	66065705	.	AAAAAAAAAAAAAAAGACC	A	1374.15	PASS	AB=0.949;AC=10;AF=0.179;AN=56;BaseQRankSum=4.650;DP=404;FS=57.111;HRun=0;HaplotypeScore=150.8538;InbreedingCoeff=-0.0131;MQ=37.38;MQ0=37;MQRankSum=-1.079;QD=11.45;ReadPosRankSum=3.662;VQSLOD=0.9703;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:20:35.30:0,35,934	0/1:4,1:4:20.82:120,0,21	0/0:35,0:8:18.63:0,19,350	0/0:28,0:8:14.66:0,15,165	0/0:18,0:18:24.29:0,24,637	0/1:9,0:8:29.38:29,0,74	0/1:12,0:10:28:251,0,28	0/0:10,0:5:5.23:0,5,47	0/1:9,1:10:28.39:120,0,28	0/0:11,0:10:0:0,0,0	0/0:6,0:4:0:0,0,0	0/0:4,0:3:0:0,0,0	0/0:8,0:8:11.71:0,12,379	0/0:9,0:9:5.93:0,6,56	0/1:12,1:12:41.17:252,0,41	0/0:10,0:8:0:0,0,0	0/1:26,0:21:80.24:226,0,80	0/0:13,0:12:4.58:0,5,107	0/0:12,0:10:9.02:0,9,107	0/1:17,0:16:81.43:254,0,81	0/0:11,0:10:1.55:0,2,4	0/0:11,0:10:9.48:0,9,97	0/0:20,0:20:33.79:0,34,767	0/0:16,0:13:20.26:0,20,608	0/1:11,1:12:42.48:117,0,42	1/1:16,0:12:3:135,3,0	0/0:25,0:20:3.48:0,3,33	0/0:12,0:9:6.36:0,6,54
chr10	66065706	.	AAAAAAAAAAAAAAGACC	A	1335.16	PASS	AB=0.972;AC=18;AF=0.321;AN=56;BaseQRankSum=0.034;DP=406;FS=35.329;HRun=0;HaplotypeScore=144.9528;InbreedingCoeff=-0.0241;MQ=37.36;MQ0=37;MQRankSum=-0.303;QD=8.24;ReadPosRankSum=2.125;VQSLOD=1.2490;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:22:22.45:0,22,806	0/1:5,0:4:17.42:114,0,17	0/0:36,0:8:18.60:0,19,343	0/0:28,0:8:14.01:0,14,141	0/0:18,0:18:11.96:0,12,522	0/1:9,0:8:42.86:56,0,43	0/1:13,1:12:12.15:230,0,12	0/1:10,0:5:6.77:7,0,19	0/1:10,0:10:20.19:114,0,20	1/1:10,0:9:2.97:20,3,0	1/1:6,0:4:0.89:2,1,0	1/1:4,0:3:0.47:1,0,0	0/0:8,0:8:14.52:0,15,407	0/0:7,0:7:5.90:0,6,45	0/1:12,1:12:31.66:231,0,32	0/1:10,0:8:0:0,0,0	0/1:26,1:22:45.55:241,0,46	0/0:13,0:12:2.62:0,3,86	0/0:12,0:10:8.07:0,8,61	0/1:15,2:16:57.95:227,0,58	0/0:11,0:10:1.43:0,1,4	0/0:11,0:10:8.16:0,8,68	0/0:20,0:20:34.69:0,35,658	0/0:16,0:13:15.13:0,15,567	0/1:12,0:12:27.91:112,0,28	1/1:14,1:11:2.77:121,3,0	0/0:25,0:20:2.77:0,3,21	0/0:12,0:9:2.51:0,3,29
chr10	66065719	.	AGACC	A	4913.93	PASS	AB=0.814;AC=45;AF=0.833;AN=54;BaseQRankSum=-2.219;DP=388;FS=20.261;HRun=0;HaplotypeScore=60.7258;InbreedingCoeff=-0.0297;MQ=45.02;MQ0=34;MQRankSum=-4.690;QD=12.70;ReadPosRankSum=-0.520;VQSLOD=2.4483;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:19,9:23:30.38:520,0,30	1/1:2,3:4:9.03:140,9,0	0/1:43,0:10:1.25:1,0,63	0/1:34,0:11:1:1,0,59	0/1:9,7:16:99:215,0,109	1/1:0,12:12:21.07:341,21,0	1/1:4,13:14:15.05:197,15,0	1/1:6,0:2:5.99:61,6,0	1/1:3,5:8:12.04:181,12,0	1/1:2,0:1:2.68:11,3,0	./.	0/1:8,0:7:3.35:89,0,3	0/1:5,2:7:23.21:90,0,23	0/1:1,7:8:0.19:76,0,0	1/1:11,0:10:18.04:228,18,0	1/1:13,0:11:15.03:197,15,0	1/1:9,19:25:15.52:225,16,0	1/1:4,8:11:15.03:212,15,0	1/1:4,5:7:15.04:226,15,0	1/1:11,5:15:37.17:486,37,0	1/1:9,0:9:11.98:146,12,0	1/1:2,9:10:10.58:143,11,0	0/1:9,7:16:85.05:359,0,85	0/1:11,2:11:12.90:113,0,13	1/1:2,15:17:17.09:233,17,0	1/1:7,0:5:2.74:34,3,0	1/1:6,16:17:15.05:241,15,0	1/1:2,7:7:9.03:147,9,0
chr10	66065721	.	ACC	A	3119.44	PASS	AB=0.970;AC=43;AF=0.827;AN=52;BaseQRankSum=-0.225;DP=378;FS=3.462;HRun=2;HaplotypeScore=60.4515;InbreedingCoeff=0.0564;MQ=45.47;MQ0=34;MQRankSum=-2.694;QD=9.37;ReadPosRankSum=-1.038;VQSLOD=0.3088;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:24,3:23:2.62:379,0,3	1/1:5,0:4:8.89:79,9,0	0/0:43,0:10:5.99:0,6,58	0/1:35,0:12:3.67:4,0,58	0/1:15,0:15:36.46:135,0,36	1/1:12,0:12:21.05:224,21,0	1/1:17,0:14:14.76:124,15,0	1/1:5,1:2:5.95:57,6,0	1/1:6,0:6:11.90:113,12,0	./.	./.	0/1:8,0:7:13.04:58,0,13	0/1:7,0:7:16.36:56,0,16	0/1:8,0:8:8.52:47,0,9	1/1:10,0:9:17.67:123,18,0	1/1:12,0:10:16.77:117,17,0	1/1:25,0:22:14.78:135,15,0	1/1:12,0:11:13.45:106,13,0	1/1:7,0:5:14.76:136,15,0	1/1:17,0:16:38.55:322,39,0	1/1:8,0:8:11.93:95,12,0	1/1:10,0:9:9.01:93,9,0	0/1:14,2:16:30.01:252,0,30	1/1:13,1:12:14.72:110,15,0	1/1:17,0:17:14.91:146,15,0	1/1:10,0:8:11.08:85,11,0	1/1:20,0:15:15.04:162,15,0	1/1:9,0:7:9.02:99,9,0
chr10	66065879	.	T	TAAA	1133	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=-0.039;DP=441;FS=6.900;HRun=12;HaplotypeScore=75.3921;InbreedingCoeff=0.8438;MQ=74.06;MQ0=0;MQRankSum=1.062;QD=13.82;ReadPosRankSum=-4.355;VQSLOD=0.5342;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:15:38.96:0,39,409	0/0:14,0:14:29.95:0,30,334	0/0:13,0:13:14.87:0,15,159	0/0:14,0:14:23.18:0,23,251	0/0:27,0:27:17.43:0,17,404	0/0:16,0:16:26.73:0,27,271	0/0:7,0:8:17.87:0,18,185	1/1:24,3:30:46.63:631,47,0	0/0:12,0:12:26.96:0,27,302	1/1:5,7:14:27.05:373,27,0	1/1:6,10:16:15.05:258,15,0	0/0:9,0:9:11.84:0,12,134	0/0:9,0:9:8.56:0,9,100	0/0:9,0:9:14.86:0,15,167	0/0:12,0:13:23.84:0,24,269	0/0:11,0:13:26.90:0,27,287	0/0:24,0:26:62.86:0,63,650	1/1:2,0:10:9.97:23,10,0	0/0:11,0:11:20.97:0,21,236	0/0:21,0:22:54:0,54,604	0/1:11,0:12:3.99:4,0,165	0/0:18,0:18:32.87:0,33,368	0/0:15,0:18:21.16:0,21,261	0/0:15,0:15:27.76:0,28,290	0/0:23,0:23:41.77:0,42,471	0/0:15,0:18:18.97:0,19,373	0/0:24,0:23:44.79:0,45,496	0/0:11,0:11:22.82:0,23,240
chr10	66066204	.	T	TCTTACACAATTA	22397.93	PASS	AB=0.818;AC=55;AF=0.982;AN=56;BaseQRankSum=-2.275;DP=265;FS=20.466;HRun=0;HaplotypeScore=281.6176;InbreedingCoeff=-0.0387;MQ=72.99;MQ0=0;MQRankSum=-0.705;QD=84.52;ReadPosRankSum=-0.178;VQSLOD=3.3076;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,0:7:21.07:837,21,0	1/1:6,0:6:14.69:404,15,0	1/1:6,0:9:1.02:457,1,0	0/1:7,1:9:1.95:1157,0,2	1/1:16,0:16:35.01:1136,35,0	1/1:14,0:14:21:1281,21,0	1/1:9,0:9:21.04:800,21,0	1/1:17,0:17:48.16:1841,48,0	1/1:13,0:13:31.95:1092,32,0	1/1:13,0:13:17.39:1135,17,0	1/1:4,0:4:12.04:402,12,0	1/1:8,0:8:16.84:487,17,0	1/1:11,0:11:13.39:633,13,0	1/1:11,0:11:23.93:867,24,0	1/1:8,0:8:16.99:479,17,0	1/1:11,0:11:24.55:1115,25,0	1/1:8,0:8:12.04:602,12,0	1/1:4,0:4:8.21:405,8,0	1/1:8,0:8:24.05:990,24,0	1/1:8,0:8:17.05:427,17,0	1/1:8,0:8:18.05:664,18,0	1/1:8,0:8:22.83:839,23,0	1/1:12,0:12:32.30:1018,32,0	1/1:10,0:10:4.03:305,4,0	1/1:8,0:8:24.08:1052,24,0	1/1:7,0:7:10.06:581,10,0	1/1:16,0:16:36.34:1054,36,0	1/1:2,0:2:6.02:336,6,0
chr10	66066489	.	T	TA	380.03	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-0.463;DP=482;FS=7.047;HRun=8;HaplotypeScore=58.1646;InbreedingCoeff=0.9065;MQ=83.62;MQ0=0;MQRankSum=-0.865;QD=20.00;ReadPosRankSum=-2.690;VQSLOD=2.4407;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:96.04:0,96,874	0/0:4,0:4:11.99:0,12,105	0/0:18,0:18:44.20:0,44,377	0/0:11,0:11:20.34:0,20,161	0/0:13,0:13:30.01:0,30,274	0/0:15,0:15:45.02:0,45,412	0/0:25,0:25:65.99:0,66,591	1/1:5,14:19:42.11:475,42,0	0/0:18,0:18:51.02:0,51,467	0/0:15,0:15:36.02:0,36,330	0/0:4,0:4:12.01:0,12,110	0/0:20,0:20:57.03:0,57,522	0/0:14,0:14:36.01:0,36,330	0/0:18,0:18:43.62:0,44,433	0/0:30,0:30:78.02:0,78,709	0/0:20,0:20:60.03:0,60,549	0/0:29,0:29:78.03:0,78,714	0/0:17,0:17:42.02:0,42,384	0/0:10,0:10:27.01:0,27,247	0/0:12,0:12:32.99:0,33,293	0/0:24,0:24:66.03:0,66,604	0/0:8,0:8:24.01:0,24,220	0/0:11,0:11:30.02:0,30,275	0/0:26,0:26:60.02:0,60,549	0/0:14,0:14:30.01:0,30,275	0/0:20,0:20:54.03:0,54,494	0/0:26,0:26:78.04:0,78,714	0/0:4,0:4:12.01:0,12,110
chr10	66066965	.	GA	G	6884.91	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=12.090;DP=531;FS=31.334;HRun=9;HaplotypeScore=99.3768;InbreedingCoeff=0.9281;MQ=67.91;MQ0=1;MQRankSum=-10.437;QD=21.65;ReadPosRankSum=-1.106;VQSLOD=3.0161;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,132,1487	1/1:1,9:10:30.02:274,30,0	0/0:30,1:17:1.78:0,2,155	0/0:31,1:13:10.83:0,11,82	0/0:27,0:27:72.21:0,72,828	1/1:1,13:14:39.02:356,39,0	1/1:1,15:15:30.02:274,30,0	1/1:6,20:26:62.43:575,62,0	0/0:14,0:14:36.09:0,36,403	1/1:6,20:26:63.01:573,63,0	1/1:5,13:18:10.40:348,10,0	1/1:4,7:11:21.01:192,21,0	0/0:8,0:8:24.07:0,24,277	1/1:3,6:9:18.01:165,18,0	1/1:4,8:12:24.01:219,24,0	1/1:8,11:19:7.40:322,7,0	1/1:4,18:21:50.99:460,51,0	0/0:24,1:25:35.70:0,36,654	1/1:5,21:26:65.05:582,65,0	1/1:3,15:18:45.02:411,45,0	1/1:1,6:7:18.01:164,18,0	1/1:2,12:14:36.02:328,36,0	0/0:12,0:12:30.09:0,30,346	0/0:14,0:15:41.96:0,42,464	1/1:3,12:15:39.01:352,39,0	1/1:3,23:26:69.02:626,69,0	1/1:4,22:26:65.39:580,65,0	1/1:0,3:3:9:82,9,0
chr10	66066982	.	C	CT	4888.99	PASS	AB=1.000;AC=39;AF=0.696;AN=56;BaseQRankSum=13.020;DP=526;FS=9.594;HRun=9;HaplotypeScore=115.9553;InbreedingCoeff=0.9228;MQ=67.37;MQ0=3;MQRankSum=-13.263;QD=14.30;ReadPosRankSum=0.522;VQSLOD=3.8025;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,143,1231	1/1:8,0:8:17.53:105,18,0	0/0:38,0:19:13.33:0,13,210	0/1:41,0:14:2.10:2,0,83	0/0:27,0:27:65.98:0,66,573	1/1:11,3:14:34.93:238,35,0	1/1:10,0:9:23.33:144,23,0	1/1:22,8:30:41.17:414,41,0	0/0:12,0:12:32.99:0,33,286	1/1:12,16:28:51.14:561,51,0	1/1:6,7:13:24.06:265,24,0	1/1:10,2:12:23.43:158,23,0	0/0:10,0:10:23.96:0,24,205	1/1:7,1:8:17.52:114,18,0	1/1:9,1:10:26.33:172,26,0	1/1:3,10:13:7.03:304,7,0	1/1:13,4:15:29.45:224,29,0	0/0:22,0:22:62.94:0,63,540	1/1:22,6:26:49.19:394,49,0	1/1:17,3:20:40.02:265,40,0	1/1:4,2:6:14.81:119,15,0	1/1:11,3:13:29.52:223,30,0	0/0:10,0:10:23.83:0,24,196	0/0:14,0:14:32.99:0,33,286	1/1:6,6:11:29.66:257,30,0	1/1:20,5:25:58.68:419,59,0	1/1:21,5:26:55.55:367,56,0	1/1:6,1:7:20.60:144,21,0
chr10	66066987	.	T	TTTTTTC	15273.10	PASS	AB=1.000;AC=34;AF=0.607;AN=56;BaseQRankSum=3.291;DP=566;FS=24.191;HRun=0;HaplotypeScore=123.4174;InbreedingCoeff=0.8358;MQ=63.91;MQ0=9;MQRankSum=-12.714;QD=46.85;ReadPosRankSum=-2.711;VQSLOD=2.4431;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,147,2805	1/1:0,6:6:18.06:599,18,0	0/0:36,0:17:30.94:0,31,408	0/0:40,0:13:11.56:0,12,218	0/0:28,0:27:69.22:0,69,1415	1/1:5,9:18:39.12:1086,39,0	1/1:4,7:9:24.08:757,24,0	1/1:14,10:29:68.87:1500,69,0	0/0:16,0:16:42.09:0,42,703	0/1:30,0:30:99:125,0,286	0/0:13,0:12:5.26:0,5,146	1/1:4,8:13:23.88:665,24,0	0/0:10,0:10:24.03:0,24,453	1/1:3,6:10:18.06:553,18,0	1/1:3,8:13:27.08:764,27,0	0/1:14,0:13:6.66:7,0,236	1/1:6,7:16:30.09:748,30,0	0/0:22,0:22:66.14:0,66,1268	1/1:10,12:29:66.76:1491,67,0	1/1:10,10:23:49.54:1099,50,0	1/1:3,3:6:18.04:388,18,0	1/1:6,8:14:30.08:770,30,0	0/0:12,0:12:27.08:0,27,499	0/0:14,0:14:36.09:0,36,653	1/1:8,8:17:30.09:667,30,0	1/1:10,14:27:66.17:1762,66,0	1/1:12,13:30:57.18:1637,57,0	1/1:1,7:10:21.07:653,21,0
chr10	66067383	.	CTTTTTTTT	C	1377	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-2.235;DP=519;FS=0.749;HRun=14;HaplotypeScore=149.0502;InbreedingCoeff=0.8954;MQ=78.48;MQ0=5;MQRankSum=-1.733;QD=44.42;ReadPosRankSum=-2.648;VQSLOD=0.9734;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:29:77.61:0,78,2597	0/0:5,0:5:15:0,15,295	0/0:34,0:19:23.95:0,24,561	0/0:36,0:19:27.38:0,27,435	0/0:17,0:17:42.13:0,42,1231	0/0:32,0:32:77.25:0,77,2348	0/0:14,0:14:32.70:0,33,1038	1/1:4,27:31:75.12:1472,75,0	0/0:16,0:16:36.11:0,36,1106	0/0:16,0:16:39.13:0,39,1406	0/0:12,0:13:39.11:0,39,1084	0/0:22,0:22:42.13:0,42,1289	0/0:12,0:11:27.08:0,27,810	0/0:15,0:15:34.92:0,35,1009	0/0:18,0:18:45.15:0,45,1390	0/0:14,0:15:42.13:0,42,1362	0/0:23,0:24:58.50:0,58,1773	0/0:20,0:22:57.18:0,57,1771	0/0:23,0:24:56.58:0,57,1406	0/0:11,0:11:33.11:0,33,873	0/0:21,0:21:57.19:0,57,1842	0/0:3,0:3:9.02:0,9,244	0/0:7,0:7:12.04:0,12,456	0/0:10,0:11:24.54:0,25,729	0/0:9,0:9:22.89:0,23,636	0/0:18,0:18:49.83:0,50,1321	0/0:29,0:29:66.82:0,67,1745	0/0:12,0:11:24.05:0,24,733
chr10	66067393	.	T	TG	7888.87	PASS	AB=1.000;AC=35;AF=0.625;AN=56;BaseQRankSum=-11.236;DP=509;FS=1.250;HRun=0;HaplotypeScore=65.3338;InbreedingCoeff=0.8927;MQ=74.87;MQ0=6;MQRankSum=0.688;QD=25.12;ReadPosRankSum=6.376;VQSLOD=5.7612;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:63.98:0,64,803	1/1:0,5:5:12.04:148,12,0	0/0:39,0:18:17.19:0,17,224	0/0:40,0:18:16.75:0,17,175	0/0:17,0:17:45.06:0,45,524	1/1:3,29:32:62.76:816,63,0	1/1:0,13:13:33.10:409,33,0	0/1:30,0:30:28.46:28,0,184	1/1:1,12:13:9.03:352,9,0	0/0:16,0:16:45.04:0,45,500	0/0:16,0:16:43.42:0,43,448	1/1:0,15:15:39.12:489,39,0	0/0:11,0:10:30.03:0,30,334	1/1:1,13:14:23.38:333,23,0	1/1:0,19:19:42.13:528,42,0	0/0:15,0:15:39.04:0,39,466	1/1:3,25:28:31.45:637,31,0	1/1:4,19:23:50.53:611,51,0	1/1:1,23:24:70.91:739,71,0	1/1:1,14:15:40.06:406,40,0	1/1:5,13:19:49.78:577,50,0	1/1:0,4:4:8.92:79,9,0	0/0:4,0:4:12.02:0,12,136	0/0:10,0:10:18.73:0,19,245	1/1:0,10:10:24.08:301,24,0	1/1:0,17:17:48.02:544,48,0	1/1:3,23:26:49.05:630,49,0	1/1:0,7:7:21.07:261,21,0
chr10	66067570	.	C	CT	899.29	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-4.672;DP=321;FS=7.530;HRun=5;HaplotypeScore=48.0079;InbreedingCoeff=0.7914;MQ=70.60;MQ0=0;MQRankSum=0.902;QD=29.01;ReadPosRankSum=-3.445;VQSLOD=2.2284;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:69.12:0,69,720	0/0:4,0:4:9.02:0,9,96	0/0:11,0:10:15.01:0,15,152	0/0:12,0:11:21.03:0,21,218	0/0:18,0:18:54.14:0,54,580	0/0:10,0:10:21.04:0,21,216	0/0:3,0:3:9.01:0,9,90	1/1:8,23:30:81.16:994,81,0	0/0:7,0:7:18.01:0,18,182	0/0:14,0:14:36.09:0,36,387	0/0:12,0:12:36.02:0,36,365	0/0:9,0:9:24.04:0,24,245	0/0:14,0:14:33.08:0,33,355	0/0:6,0:6:12.03:0,12,129	0/0:11,0:10:24.05:0,24,251	0/0:6,0:6:18.04:0,18,192	0/0:15,0:15:36.07:0,36,385	0/0:12,0:12:11.98:0,12,108	0/0:11,0:10:24.06:0,24,258	0/0:10,0:10:24.05:0,24,249	0/0:10,0:10:24.04:0,24,238	0/0:9,0:9:24.05:0,24,252	0/0:7,0:7:18.04:0,18,188	0/0:6,0:6:15.04:0,15,161	0/0:13,0:13:36.05:0,36,374	0/0:11,0:11:24.06:0,24,258	0/0:16,0:16:33.08:0,33,354	0/0:8,0:8:24.06:0,24,258
chr10	66067579	.	G	GATTTATTTATTTATTT	7722.79	PASS	AC=38;AF=0.760;AN=50;BaseQRankSum=3.723;DP=303;FS=0.000;HRun=0;HaplotypeScore=117.4420;InbreedingCoeff=0.6079;MQ=63.02;MQ0=2;MQRankSum=-7.069;QD=37.13;ReadPosRankSum=-4.686;VQSLOD=2.3466;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:66.23:0,66,2660	1/1:1,1:2:3.01:227,3,0	./.	0/0:14,0:11:2.81:0,3,53	0/0:18,0:18:33.11:0,33,1414	1/1:6,4:10:12.04:779,12,0	./.	1/1:29,0:28:33.06:835,33,0	1/1:6,0:6:3.01:95,3,0	1/1:16,0:16:15.04:458,15,0	1/1:6,0:11:15.05:571,15,0	1/1:6,0:6:3.01:227,3,0	0/0:11,0:11:21.07:0,21,923	1/1:2,2:5:3.01:227,3,0	1/1:9,1:9:3.01:212,3,0	1/1:6,0:7:6.02:243,6,0	1/1:17,0:17:15.05:472,15,0	1/1:3,1:11:6.02:325,6,0	1/1:11,1:11:6.02:298,6,0	1/1:3,0:7:12.04:515,12,0	1/1:5,0:5:2.97:20,3,0	./.	0/0:5,0:5:9.03:0,9,395	0/0:5,0:5:6.02:0,6,264	1/1:13,3:16:18.06:1139,18,0	1/1:11,0:11:3.01:113,3,0	1/1:13,2:15:6.02:454,6,0	1/1:12,0:12:12.04:512,12,0
chr10	66068849	.	GT	G	18035.89	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=11.209;DP=685;FS=1.027;HRun=2;HaplotypeScore=69.4916;InbreedingCoeff=0.9994;MQ=73.94;MQ0=0;MQRankSum=-5.149;QD=35.36;ReadPosRankSum=2.105;VQSLOD=5.4718;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,135,2000	1/1:0,13:13:33.08:428,33,0	0/0:34,0:34:92.77:0,93,1387	0/0:11,0:11:30.09:0,30,420	0/0:24,0:24:69.22:0,69,1014	1/1:0,27:27:78.25:1012,78,0	1/1:0,21:21:57.18:738,57,0	1/1:0,25:25:75.23:959,75,0	1/1:0,21:21:60.20:778,60,0	1/1:1,25:26:75.23:959,75,0	1/1:1,20:21:54.18:699,54,0	1/1:0,29:29:87.28:1129,87,0	0/0:23,0:23:69.22:0,69,1014	1/1:0,13:13:33.11:428,33,0	1/1:0,37:37:99:1284,99,0	1/1:0,19:19:48.16:623,48,0	1/1:0,32:32:90.29:1168,90,0	1/1:0,31:31:78.25:1012,78,0	1/1:0,25:25:75.22:943,75,0	1/1:0,34:34:99:1284,99,0	1/1:0,37:37:90.29:1168,90,0	1/1:1,17:18:45.15:584,45,0	0/0:22,0:22:66.19:0,66,965	0/0:16,0:16:48.16:0,48,714	1/1:1,16:17:45.15:584,45,0	1/1:1,29:30:45.25:1049,45,0	1/1:1,25:26:68.98:893,69,0	1/1:0,8:8:24.08:311,24,0
chr10	66069395	.	GGT	G	1329.37	PASS	AB=0.951;AC=35;AF=0.625;AN=56;BaseQRankSum=5.281;DP=543;FS=8.150;HRun=0;HaplotypeScore=127.0507;InbreedingCoeff=0.0835;MQ=58.74;MQ0=20;MQRankSum=-1.817;QD=3.51;ReadPosRankSum=0.471;VQSLOD=1.5668;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:26,1:27:12.55:161,13,0	1/1:8,0:8:9.65:53,10,0	0/0:60,0:16:21.78:0,22,167	0/0:51,0:17:8.59:0,9,142	0/1:5,2:7:4.61:52,0,5	1/1:14,1:15:11.53:81,12,0	0/1:19,0:19:1.81:2,0,30	0/1:23,0:22:15.96:16,0,30	1/1:20,0:20:3.15:38,3,0	0/1:12,1:13:7.87:73,0,8	0/1:15,1:16:37.81:73,0,38	1/1:16,0:16:3.53:53,4,0	0/1:15,0:15:10.03:10,0,39	1/1:19,0:19:9.12:66,9,0	0/1:14,0:14:2.03:10,0,2	1/1:10,3:13:14.11:164,14,0	1/1:23,2:25:7.36:98,7,0	0/1:14,4:18:14.57:172,0,15	0/1:12,0:12:4.89:41,0,5	0/0:7,0:7:2.35:0,2,5	0/0:38,0:36:2.72:0,3,7	1/1:16,0:16:1.22:8,1,0	0/0:8,0:8:3.26:0,3,17	1/1:14,12:26:11.39:165,11,0	0/1:15,0:14:0.93:8,0,1	1/1:24,0:24:9.69:80,10,0	0/1:15,0:15:13.14:44,0,13	1/1:3,0:3:2.31:13,2,0
chr10	66069397	.	TGTCA	T	1806.50	PASS	AB=0.930;AC=31;AF=0.554;AN=56;BaseQRankSum=2.712;DP=538;FS=0.662;HRun=0;HaplotypeScore=140.1066;InbreedingCoeff=0.0597;MQ=57.43;MQ0=22;MQRankSum=-2.542;QD=4.96;ReadPosRankSum=2.036;VQSLOD=2.7170;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:27,1:27:1.82:41,0,2	1/1:9,0:9:12.03:134,12,0	0/0:59,0:15:21.78:0,22,167	0/0:50,0:17:8.51:0,9,136	0/0:6,1:7:5.08:0,5,21	1/1:14,0:14:9.49:139,9,0	0/1:16,2:18:37.34:65,0,37	0/1:23,0:22:15.96:16,0,30	1/1:16,0:19:9.42:122,9,0	0/1:13,0:13:34.59:54,0,35	0/1:16,1:17:14.20:14,0,44	0/1:11,5:17:9.23:207,0,9	0/0:16,0:16:9.81:0,10,105	1/1:15,3:19:14.19:224,14,0	0/1:13,1:14:1.07:74,0,1	0/1:14,0:14:29.01:34,0,29	1/1:20,2:23:8.14:153,8,0	0/1:18,0:18:24.55:25,0,67	0/1:11,0:11:4.84:68,0,5	0/0:7,0:7:2.35:0,2,5	1/1:37,1:35:3.54:40,4,0	1/1:11,3:15:2.10:40,2,0	0/0:9,0:9:2.85:0,3,17	0/0:25,0:25:5.98:0,6,20	1/1:14,1:14:1.60:47,2,0	1/1:20,0:21:9.76:226,10,0	0/1:10,4:15:8.16:203,0,8	1/1:2,1:3:2.48:46,2,0
chr10	66069454	.	CCACAT	C	5917.19	PASS	AB=0.833;AC=39;AF=0.722;AN=54;BaseQRankSum=5.619;DP=691;FS=19.850;HRun=0;HaplotypeScore=138.1291;InbreedingCoeff=0.8515;MQ=65.38;MQ0=54;MQRankSum=-5.714;QD=16.76;ReadPosRankSum=0.589;VQSLOD=2.7333;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:75.26:0,75,1959	./.	0/0:113,0:33:37.42:0,37,917	0/0:126,0:60:89.32:0,89,1628	0/0:18,0:18:42.02:0,42,1044	1/1:6,5:7:3.01:54,3,0	1/1:3,15:17:9.03:145,9,0	1/1:6,23:27:72.18:1200,72,0	1/1:4,12:16:33.11:540,33,0	1/1:8,7:14:14.15:235,14,0	0/1:8,2:7:0:0,0,0	1/1:6,7:13:23.66:460,24,0	0/0:15,0:15:39.13:0,39,914	1/1:3,13:16:15.05:263,15,0	1/1:5,20:23:11.83:232,12,0	1/1:7,14:19:15.03:253,15,0	1/1:7,17:23:12.04:207,12,0	1/1:9,11:18:15.05:291,15,0	1/1:4,13:16:23.95:338,24,0	1/1:4,9:11:5.81:92,6,0	1/1:21,24:39:11.58:191,12,0	1/1:10,2:11:12:178,12,0	0/0:11,0:11:24.04:0,24,621	0/0:22,0:22:53.99:0,54,1329	1/1:5,1:3:9.03:150,9,0	1/1:7,12:16:29.20:479,29,0	1/1:2,17:18:29.75:513,30,0	1/1:2,2:4:6.02:95,6,0
chr10	66069483	.	T	TTTAAAATA	1775.65	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.071;DP=560;FS=0.000;HRun=0;HaplotypeScore=163.1471;InbreedingCoeff=0.8642;MQ=81.00;MQ0=22;MQRankSum=-5.685;QD=93.46;ReadPosRankSum=0.035;VQSLOD=4.1063;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:84.27:0,84,2201	0/0:3,0:3:9.03:0,9,245	0/0:29,0:25:57.03:0,57,1289	0/0:47,0:41:69.20:0,69,1577	0/0:18,0:18:48.15:0,48,1212	0/0:11,0:8:12.04:0,12,320	0/0:26,0:25:37.76:0,38,1062	0/0:31,0:31:78.17:0,78,1785	1/1:9,10:19:48.15:1870,48,0	0/0:12,0:12:21.05:0,21,509	0/0:9,0:6:11.97:0,12,265	0/0:17,0:17:36.11:0,36,933	0/0:16,0:16:48.16:0,48,1288	0/0:19,0:19:29.95:0,30,604	0/0:25,0:23:23.65:0,24,627	0/0:25,0:24:41.37:0,41,937	0/0:29,0:28:45.10:0,45,1079	0/0:21,0:19:27.09:0,27,698	0/0:23,0:23:54.15:0,54,1251	0/0:13,0:11:24.08:0,24,648	0/0:33,0:29:41.64:0,42,1038	0/0:10,0:9:23.93:0,24,513	0/0:13,0:13:36.11:0,36,909	0/0:22,0:22:53.90:0,54,1386	0/0:8,0:6:15.01:0,15,349	0/0:18,0:17:42.14:0,42,1149	0/0:24,0:23:47.51:0,48,877	0/0:6,0:6:18.06:0,18,485
chr10	66069880	.	AGCATCTGCT	A	1653.84	PASS	AB=0.974;AC=14;AF=0.250;AN=56;BaseQRankSum=9.307;DP=634;FS=18.863;HRun=0;HaplotypeScore=168.4140;InbreedingCoeff=0.6494;MQ=59.66;MQ0=14;MQRankSum=-2.428;QD=11.81;ReadPosRankSum=-2.529;VQSLOD=0.4709;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:31.37:0,31,505	0/1:7,0:7:0.68:1,0,301	0/1:15,0:7:2.06:2,0,70	0/1:21,0:9:31.51:32,0,59	0/0:4,0:4:12.04:0,12,184	0/0:11,0:10:21.07:0,21,324	0/0:58,0:58:99:0,153,3108	1/1:4,9:11:27.07:401,27,0	0/1:35,0:34:99:104,0,533	1/1:5,8:11:27.29:332,27,0	1/1:3,0:3:6.02:82,6,0	0/0:34,0:34:84.22:0,84,2006	0/0:20,0:20:51.11:0,51,1183	0/0:41,0:41:99:0,111,2639	0/0:29,0:29:87.25:0,87,2098	1/1:16,0:14:27.09:425,27,0	0/0:32,0:32:93.28:0,93,2186	1/1:15,0:15:32.76:452,33,0	0/0:21,0:19:47.13:0,47,643	0/0:10,0:9:18.06:0,18,291	0/0:87,0:82:99:0,202,3902	0/0:7,0:5:12.04:0,12,214	0/0:10,0:10:27.08:0,27,423	0/0:61,0:61:99:0,163,3781	0/0:9,0:9:24.07:0,24,406	0/0:28,0:24:59.35:0,59,929	0/0:8,0:8:24.06:0,24,434	0/0:11,0:11:21.07:0,21,378
chr10	66071049	.	T	TACACAC	3795.03	PASS	AB=0.844;AC=29;AF=0.558;AN=52;BaseQRankSum=0.060;DP=745;FS=0.000;HRun=0;HaplotypeScore=182.2121;InbreedingCoeff=0.5596;MQ=63.70;MQ0=13;MQRankSum=-5.829;QD=8.97;ReadPosRankSum=-2.651;VQSLOD=2.0403;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:43:53.10:0,53,676	1/1:2,6:11:8.81:232,9,0	./.	./.	0/0:27,0:29:30.95:0,31,642	1/1:6,12:23:9.03:225,9,0	1/1:18,11:32:8.02:133,8,0	0/1:21,0:21:29.90:88,0,30	1/1:7,0:21:3.84:80,4,0	0/0:18,0:20:28.84:0,29,397	0/1:19,0:20:19.59:20,0,330	1/1:12,11:30:6.87:109,7,0	0/0:23,0:27:23.12:0,23,641	0/1:12,9:25:30.40:30,0,57	1/1:12,13:32:21.07:562,21,0	0/0:19,0:21:27.92:0,28,457	1/1:15,5:25:14.88:310,15,0	0/0:6,0:16:14.99:0,15,165	1/1:14,0:18:19.42:345,19,0	0/1:11,0:23:0.04:0,0,0	1/1:32,12:54:4.61:56,5,0	1/1:10,11:23:12.04:286,12,0	0/0:21,0:20:31.35:0,31,604	0/0:34,0:36:63.11:0,63,1017	0/0:11,10:23:3.01:0,3,42	0/1:25,1:28:3.56:677,0,4	1/1:12,4:20:15.05:368,15,0	1/1:3,6:11:12.51:274,13,0
chr10	66071438	.	G	GAA	2531.47	PASS	AB=0.981;AC=13;AF=0.232;AN=56;BaseQRankSum=-2.487;DP=645;FS=0.378;HRun=11;HaplotypeScore=94.3074;InbreedingCoeff=0.7805;MQ=72.73;MQ0=1;MQRankSum=2.519;QD=13.68;ReadPosRankSum=-3.453;VQSLOD=1.7302;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:23:62.55:0,63,576	0/0:10,0:12:18.11:0,18,182	0/1:14,0:14:55.76:56,0,65	0/1:20,0:14:0.64:1,0,62	0/0:29,0:32:80.51:0,81,800	0/0:22,0:22:54.07:0,54,524	0/0:12,0:13:20.96:0,21,253	1/1:8,0:31:32.08:188,32,0	0/0:32,0:32:72.02:0,72,698	1/1:8,24:33:65.68:898,66,0	1/1:5,20:29:62.95:749,63,0	0/0:16,0:16:48.07:0,48,460	0/0:17,0:19:41.76:0,42,390	0/0:10,0:10:27.02:0,27,262	0/0:26,0:26:66.07:0,66,640	1/1:1,15:19:47.13:611,47,0	0/0:24,0:26:56.70:0,57,578	1/1:1,0:26:59.89:206,60,0	0/0:22,0:26:60.17:0,60,532	0/0:20,0:21:56.79:0,57,535	0/1:6,0:10:0.25:0,0,111	0/0:21,0:21:53.93:0,54,518	0/0:15,0:16:38.79:0,39,361	0/0:11,0:11:27:0,27,256	0/0:21,0:21:54.06:0,54,524	0/0:39,1:43:52.27:0,52,935	0/0:33,0:33:87.08:0,87,837	0/0:36,0:37:99:0,105,984
chr10	66071895	.	G	GA	772.51	PASS	AB=0.706;AC=5;AF=0.089;AN=56;BaseQRankSum=6.628;DP=674;FS=0.000;HRun=11;HaplotypeScore=87.9966;InbreedingCoeff=0.6053;MQ=59.09;MQ0=4;MQRankSum=-2.462;QD=11.88;ReadPosRankSum=-0.792;VQSLOD=3.2235;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:40:79.61:0,80,606	0/0:12,0:12:28.92:0,29,212	0/0:2,0:1:0:0,0,0	0/0:10,0:9:14.87:0,15,100	0/0:35,0:39:27.53:0,28,480	0/0:23,0:23:53.76:0,54,418	0/0:21,0:23:45.44:0,45,351	0/0:28,0:26:52.66:0,53,309	0/0:21,1:22:17.37:0,17,318	0/1:14,10:22:13.22:253,0,13	1/1:10,7:17:0.39:212,0,0	0/0:22,0:23:52.82:0,53,400	0/0:16,0:17:46.83:0,47,349	0/0:23,0:24:43.83:0,44,330	0/0:25,1:27:16.41:0,16,364	1/1:10,12:22:35.44:423,35,0	0/0:25,0:24:48.24:0,48,368	0/0:26,0:26:49.34:0,49,267	0/0:27,2:27:22.08:0,22,332	0/0:31,0:31:70.72:0,71,538	0/0:14,0:16:25.93:0,26,191	0/0:37,0:38:74.75:0,75,564	0/0:22,0:23:43.81:0,44,330	0/0:28,0:28:70.75:0,71,540	0/0:13,0:12:32.87:0,33,255	0/0:33,0:34:49.35:0,49,533	0/0:27,0:28:55.73:0,56,421	0/0:19,0:18:5.57:0,6,225
chr10	66071907	.	G	GA	3528.76	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=9.946;DP=716;FS=0.826;HRun=11;HaplotypeScore=84.1804;InbreedingCoeff=0.9980;MQ=69.18;MQ0=2;MQRankSum=0.152;QD=25.76;ReadPosRankSum=-1.826;VQSLOD=2.2575;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:96.14:0,96,922	0/0:13,0:12:33.05:0,33,318	0/0:10,0:8:18.01:0,18,167	0/0:20,0:17:43.23:0,43,398	0/0:35,0:35:93.05:0,93,869	0/0:24,0:24:60.09:0,60,579	0/0:24,0:24:54.04:0,54,514	1/1:7,28:33:78.09:914,78,0	0/0:21,0:21:63.05:0,63,598	1/1:8,25:33:63.17:736,63,0	1/1:7,15:21:45.12:514,45,0	0/0:23,0:23:60.09:0,60,579	0/0:19,0:19:48.03:0,48,450	0/0:22,0:22:57.09:0,57,550	0/0:28,0:26:63.05:0,63,599	1/1:0,21:21:51.63:614,52,0	0/0:23,0:22:45.54:0,46,434	1/1:3,23:26:63.19:752,63,0	0/0:30,0:28:64.34:0,64,610	0/0:36,0:35:96.07:0,96,912	0/0:18,0:18:45.07:0,45,432	0/0:33,0:33:86.92:0,87,838	0/0:22,0:22:57.09:0,57,549	0/0:32,0:31:81.12:0,81,779	0/0:21,0:21:51.07:0,51,492	0/0:36,0:36:90.11:0,90,864	0/0:30,0:30:50.22:0,50,721	0/0:19,0:19:51.07:0,51,491
chr10	66073780	.	GTGCTCACCTGGTGTCTGTAA	G	3706.76	PASS	AB=0.948;AC=12;AF=0.214;AN=56;BaseQRankSum=7.945;DP=767;FS=18.561;HRun=0;HaplotypeScore=387.5899;InbreedingCoeff=0.6080;MQ=80.10;MQ0=3;MQRankSum=-2.477;QD=13.29;ReadPosRankSum=-1.132;VQSLOD=0.7368;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:66.23:0,66,1560	0/0:13,0:13:36.12:0,36,856	0/1:31,0:29:1.59:2,0,353	0/1:40,0:36:44.68:45,0,507	0/0:21,0:21:48.15:0,48,834	0/0:14,0:14:27.09:0,27,530	0/0:26,0:26:57.18:0,57,1079	0/1:25,9:31:18.82:236,0,19	0/1:100,0:93:99:553,0,698	1/1:7,26:33:75.19:1352,75,0	1/1:13,0:11:24.08:396,24,0	0/0:33,0:33:75.24:0,75,1612	0/0:14,0:14:33.11:0,33,771	0/0:25,0:25:66.04:0,66,1448	0/0:19,0:19:48.15:0,48,998	1/1:13,0:13:24.07:361,24,0	0/0:27,0:27:66.21:0,66,1599	1/1:15,0:12:33.10:762,33,0	0/0:16,0:16:36.12:0,36,848	0/0:18,0:18:54.18:0,54,979	0/0:87,0:87:99:0,213,4494	0/0:21,0:21:45.15:0,45,1033	0/0:14,0:14:27.09:0,27,545	0/0:32,0:32:84.29:0,84,1914	0/0:20,0:20:50.54:0,51,1045	0/0:26,0:26:18.26:0,18,1573	0/0:16,0:16:36.12:0,36,725	0/0:14,0:14:24.05:0,24,641
chr10	66075400	.	TAACA	T	5938.55	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=13.262;DP=720;FS=22.083;HRun=0;HaplotypeScore=118.3501;InbreedingCoeff=0.9998;MQ=81.69;MQ0=0;MQRankSum=-5.648;QD=48.68;ReadPosRankSum=-0.973;VQSLOD=3.6842;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,105,2718	0/0:12,0:12:36.12:0,36,928	0/0:22,0:22:60.19:0,60,1364	0/0:17,0:17:51.11:0,51,1121	0/0:27,0:27:66.21:0,66,1700	0/0:17,0:17:45.15:0,45,1147	0/0:30,0:30:78.27:0,78,2078	1/1:1,26:27:78.25:1422,78,0	0/0:27,0:27:81.26:0,81,2018	1/1:1,29:30:90.28:1613,90,0	1/1:2,15:17:39.13:728,39,0	0/0:32,0:32:93.32:0,93,2443	0/0:16,0:16:45.15:0,45,1197	0/0:34,0:34:96.33:0,96,2535	0/0:23,0:23:66.23:0,66,1761	1/1:1,13:14:36.12:672,36,0	0/0:38,0:38:99:0,108,2827	1/1:3,31:34:81.28:1504,81,0	0/0:22,0:22:63.21:0,63,1586	0/0:23,0:23:63.21:0,63,1571	0/0:60,0:60:99:0,169,4183	0/0:22,0:22:60.20:0,60,1545	0/0:23,0:23:69.24:0,69,1816	0/0:34,0:34:96.31:0,96,2430	0/0:23,0:23:69.23:0,69,1789	0/0:31,0:31:93.32:0,93,2450	0/0:19,0:19:57.20:0,57,1478	0/0:10,0:10:30.10:0,30,769
chr10	66075987	.	GT	G	6809.34	PASS	AB=0.969;AC=51;AF=0.911;AN=56;BaseQRankSum=9.488;DP=602;FS=1.152;HRun=1;HaplotypeScore=169.2719;InbreedingCoeff=-0.1209;MQ=82.91;MQ0=0;MQRankSum=-4.802;QD=11.31;ReadPosRankSum=8.976;VQSLOD=2.6792;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:50,0:50:12.26:495,12,0	1/1:12,2:14:37.49:239,37,0	0/1:21,2:23:36.80:37,0,113	0/1:22,2:24:78.26:112,0,78	1/1:19,0:19:22.82:245,23,0	1/1:18,0:18:2.23:185,2,0	1/1:22,0:22:34.28:239,34,0	0/1:13,0:13:50.16:71,0,50	1/1:31,0:31:65.66:476,66,0	1/1:23,0:23:28.53:177,29,0	1/1:16,1:17:45.18:256,45,0	1/1:18,0:18:26.80:246,27,0	1/1:23,0:22:63.15:355,63,0	1/1:25,0:25:70.75:375,71,0	0/1:18,0:18:22.78:168,0,23	1/1:12,2:14:39.83:251,40,0	1/1:26,0:26:10.92:254,11,0	0/1:6,0:6:32.66:38,0,33	1/1:23,0:23:31.72:238,32,0	1/1:17,0:17:47.97:252,48,0	1/1:22,0:22:1.59:172,2,0	1/1:29,0:29:25.59:314,26,0	1/1:15,0:15:17.85:196,18,0	1/1:23,0:23:35.60:275,36,0	1/1:20,0:20:9.84:220,10,0	1/1:27,0:27:18.82:279,19,0	1/1:32,0:30:90.92:481,91,0	1/1:10,0:10:29.03:165,29,0
chr10	66079589	.	AAGAGAGAGAGAGAGAGAG	A	3476.60	PASS	AB=0.898;AC=26;AF=0.520;AN=50;BaseQRankSum=7.285;DP=602;FS=19.300;HRun=0;HaplotypeScore=252.3327;InbreedingCoeff=0.5645;MQ=60.96;MQ0=16;MQRankSum=-4.296;QD=9.79;ReadPosRankSum=1.062;VQSLOD=0.4821;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:36:6.02:133,6,0	1/1:9,3:12:3.01:128,3,0	./.	0/1:34,0:20:0:0,0,0	1/1:13,0:23:6.02:190,6,0	1/1:15,1:20:12.04:388,12,0	0/0:17,0:16:3.01:0,3,68	0/0:21,0:19:10.06:0,10,120	0/0:16,0:19:15.05:0,15,799	0/0:15,0:15:18.53:0,19,852	0/0:16,0:16:21.05:0,21,980	1/1:13,7:20:6.02:289,6,0	0/0:16,0:16:21.07:0,21,841	1/1:16,0:16:5.89:75,6,0	1/1:9,2:16:20.56:496,21,0	0/0:15,0:20:20.97:0,21,1166	1/1:31,10:40:0.12:262,0,0	0/0:23,0:23:37.34:0,37,1383	0/1:16,0:14:0.01:49,0,0	1/1:18,4:22:8.97:292,9,0	./.	1/1:16,6:23:6.02:264,6,0	0/0:19,0:19:39.12:0,39,1884	0/0:33,0:36:48.16:0,48,2174	0/1:18,5:19:21.27:165,0,21	0/1:21,9:29:99:330,0,120	1/1:13,7:21:9.02:415,9,0	./.
chr10	66080027	.	TTC	T	3968.22	PASS	AB=0.900;AC=33;AF=0.589;AN=56;BaseQRankSum=2.873;DP=586;FS=1.621;HRun=0;HaplotypeScore=85.7610;InbreedingCoeff=0.7218;MQ=65.33;MQ0=14;MQRankSum=3.027;QD=11.71;ReadPosRankSum=3.987;VQSLOD=3.5717;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:22:39.11:0,39,538	1/1:5,4:10:11.60:116,12,0	0/1:43,1:13:1.48:1,0,40	0/0:60,1:23:15.03:0,15,167	0/0:25,0:25:53.85:0,54,788	1/1:10,9:19:21.06:238,21,0	1/1:8,14:22:36.10:409,36,0	0/0:30,0:30:31.59:0,32,350	0/0:15,0:14:14.94:0,15,127	0/0:26,0:25:40.27:0,40,448	0/0:28,0:28:6.46:0,6,49	1/1:5,5:10:4.10:126,4,0	0/0:12,2:13:18.02:0,18,247	1/1:2,13:15:34.44:357,34,0	1/1:2,8:11:23.90:252,24,0	0/0:2,0:8:6:0,6,52	1/1:10,12:23:21.30:338,21,0	0/0:10,0:17:6.79:0,7,45	1/1:18,3:19:9.02:100,9,0	1/1:8,12:20:18.98:265,19,0	1/1:8,7:15:12.03:136,12,0	1/1:3,11:15:29.92:320,30,0	0/1:16,3:19:69.04:69,0,323	0/1:18,3:22:48.18:48,0,562	1/1:3,11:14:32.93:354,33,0	1/1:10,9:20:26.84:276,27,0	1/1:3,12:15:27.07:306,27,0	1/1:11,9:22:18.78:256,19,0
chr10	66082031	.	TG	T	2689.94	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=9.915;DP=424;FS=0.967;HRun=7;HaplotypeScore=42.0056;InbreedingCoeff=0.9580;MQ=75.69;MQ0=0;MQRankSum=0.533;QD=24.02;ReadPosRankSum=-1.200;VQSLOD=3.0221;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:54.17:0,54,679	0/0:12,0:12:33.11:0,33,415	0/0:11,0:11:3.19:0,3,142	0/0:9,0:9:13.15:0,13,106	0/0:15,0:15:42.13:0,42,528	0/0:13,0:13:36.10:0,36,440	0/0:11,0:11:33.07:0,33,387	1/1:2,27:29:75.17:765,75,0	1/1:1,14:15:39.09:398,39,0	1/1:0,26:26:75.17:765,75,0	1/1:3,13:16:36.08:367,36,0	0/0:12,0:12:27.09:0,27,340	0/0:7,0:7:21.07:0,21,264	0/0:11,0:11:30.10:0,30,377	0/0:14,0:14:39.11:0,39,479	1/1:1,9:10:21.05:214,21,0	0/0:16,0:15:45.14:0,45,560	1/1:2,14:16:36.08:367,36,0	0/0:18,0:18:48.10:0,48,573	0/0:21,0:21:51.15:0,51,626	0/0:17,0:17:42.10:0,42,501	0/0:10,0:10:27.09:0,27,339	0/0:16,0:16:42.12:0,42,515	0/0:11,0:11:24.08:0,24,302	0/0:14,0:14:42.13:0,42,528	0/0:22,0:22:48.07:0,48,570	0/0:21,0:21:63.19:0,63,780	0/0:7,0:7:21.07:0,21,264
chr10	66084945	.	TG	T	564.69	PASS	AB=0.662;AC=3;AF=0.058;AN=52;BaseQRankSum=7.882;DP=819;FS=7.119;HRun=4;HaplotypeScore=71.4204;InbreedingCoeff=-0.0535;MQ=43.86;MQ0=55;MQRankSum=-4.828;QD=10.65;ReadPosRankSum=-2.393;VQSLOD=0.2865;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:36.12:0,36,504	0/0:9,0:9:12.04:0,12,168	./.	./.	0/0:28,0:28:57.05:0,57,774	0/0:17,0:17:27.09:0,27,378	0/0:17,0:15:9.03:0,9,126	0/0:25,0:20:59.99:0,60,811	0/0:36,0:35:63.21:0,63,882	0/1:6,8:12:53.47:255,0,53	0/1:5,10:14:14.93:211,0,15	0/0:51,0:50:99:0,114,1577	0/0:37,0:34:84.15:0,84,1174	0/0:43,0:43:87.29:0,87,1215	0/0:29,0:27:63.21:0,63,881	0/1:16,8:13:18.02:197,0,18	0/0:30,0:29:33.11:0,33,461	0/0:18,0:18:12.02:0,12,149	0/0:23,0:12:36.11:0,36,488	0/0:25,0:22:48.16:0,48,672	0/0:87,0:80:5.68:0,6,84	0/0:37,0:36:63.11:0,63,839	0/0:24,0:24:51.16:0,51,697	0/0:34,0:33:3.01:0,3,42	0/0:23,0:23:48.16:0,48,672	0/0:28,0:28:81.27:0,81,1132	0/0:21,0:19:45.12:0,45,609	0/0:11,0:11:18.06:0,18,252
chr10	66085678	.	T	TG	866.83	PASS	AB=0.746;AC=8;AF=0.148;AN=54;BaseQRankSum=8.769;DP=783;FS=18.942;HRun=4;HaplotypeScore=77.5608;InbreedingCoeff=0.5931;MQ=38.55;MQ0=160;MQRankSum=-7.766;QD=13.34;ReadPosRankSum=1.720;VQSLOD=1.5961;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:45:62.89:0,63,636	0/0:18,0:18:21.06:0,21,238	./.	0/0:38,0:1:1.55:0,2,4	0/0:25,0:22:6.02:0,6,68	0/0:25,0:24:33.01:0,33,349	0/0:22,0:15:23.96:0,24,242	0/1:12,2:3:31.94:32,0,59	0/1:8,13:14:28.83:388,0,29	0/0:8,0:2:6.02:0,6,68	1/1:4,3:2:5.93:58,6,0	0/0:40,0:37:54.88:0,55,642	0/0:36,0:32:50.79:0,51,578	0/0:37,0:35:66.07:0,66,728	0/0:34,0:32:63.09:0,63,704	1/1:6,8:6:18.06:246,18,0	0/0:28,0:24:45.07:0,45,495	1/1:2,7:7:21.07:287,21,0	0/0:33,0:15:33.09:0,33,374	0/0:23,0:19:26.12:0,26,283	0/0:84,1:61:85.81:0,86,1241	0/0:25,0:22:21.01:0,21,215	0/0:28,0:27:24.07:0,24,272	0/0:33,0:29:48.07:0,48,544	0/0:34,0:26:24.07:0,24,272	0/0:36,0:24:57.09:0,57,630	0/0:18,0:16:25.31:0,25,275	0/0:9,0:6:12.03:0,12,136
chr10	66086571	.	T	TG	91.59	PASS	AB=0.588;AC=1;AF=0.018;AN=56;BaseQRankSum=-0.500;DP=865;FS=7.564;HRun=4;HaplotypeScore=84.6269;InbreedingCoeff=0.0079;MQ=47.65;MQ0=74;MQRankSum=-0.539;QD=9.16;ReadPosRankSum=-3.080;VQSLOD=-0.2118;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,138,1565	0/0:12,0:12:33.09:0,33,373	0/0:36,0:1:3.01:0,3,34	0/0:49,0:5:15.04:0,15,163	0/0:22,0:22:45.11:0,45,501	0/0:26,0:26:69.16:0,69,768	0/0:20,0:19:42.12:0,42,476	0/0:28,0:14:42.10:0,42,459	0/0:37,0:35:84.20:0,84,937	0/0:39,0:35:90.25:0,90,1021	0/0:19,0:19:45.06:0,45,494	0/0:47,0:44:93.06:0,93,1053	0/0:39,0:38:92.46:0,92,1041	0/0:31,0:31:66.17:0,66,738	0/0:29,0:29:75.16:0,75,835	0/0:34,0:27:69.20:0,69,782	0/0:27,0:27:75.21:0,75,850	0/1:3,7:6:15.77:166,0,16	0/0:23,0:13:33.09:0,33,374	0/0:28,0:26:53.98:0,54,592	0/0:81,0:76:99:0,202,2259	0/0:41,0:41:75.15:0,75,835	0/0:17,0:16:30.08:0,30,340	0/0:35,0:35:98.31:0,98,1095	0/0:29,0:28:54.11:0,54,598	0/0:26,0:25:69.20:0,69,783	0/0:5,0:5:8.94:0,9,101	0/0:19,0:19:45.13:0,45,510
chr10	66086802	.	T	TG	971.44	PASS	AC=10;AF=0.185;AN=54;BaseQRankSum=3.150;DP=826;FS=11.549;HRun=3;HaplotypeScore=77.9328;InbreedingCoeff=0.9285;MQ=51.28;MQ0=46;MQRankSum=-8.481;QD=11.17;ReadPosRankSum=-3.596;VQSLOD=0.0206;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:72.22:0,72,862	0/0:16,0:14:36.11:0,36,432	0/0:56,3:11:27.08:0,27,314	0/0:48,1:11:30.09:0,30,352	0/0:31,0:31:78.23:0,78,935	0/0:18,0:18:42.13:0,42,504	0/0:30,0:29:84.16:0,84,973	1/1:3,0:2:3.01:42,3,0	1/1:5,23:20:30.10:418,30,0	1/1:1,16:9:24.08:335,24,0	1/1:1,10:7:6.02:84,6,0	0/0:41,0:39:99:0,102,1221	0/0:29,0:29:81.25:0,81,971	0/0:46,0:46:99:0,129,1517	0/0:35,0:35:87.27:0,87,1043	1/1:3,25:13:17.93:251,18,0	0/0:29,0:29:75.23:0,75,899	./.	0/0:23,0:21:57.16:0,57,671	0/0:28,0:28:72.21:0,72,850	0/0:83,2:81:99:0,176,2535	0/0:26,0:27:68.42:0,68,799	0/0:31,0:30:81.25:0,81,971	0/0:24,0:23:57.17:0,57,684	0/0:29,0:25:69.21:0,69,828	0/0:24,0:23:66.20:0,66,791	0/0:28,0:28:81.22:0,81,942	0/0:19,0:18:39.12:0,39,468
chr10	66088274	.	T	TC	190.52	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-2.075;DP=250;FS=26.310;HRun=5;HaplotypeScore=27.2036;InbreedingCoeff=0.5225;MQ=82.48;MQ0=0;MQRankSum=1.264;QD=15.88;ReadPosRankSum=-4.587;VQSLOD=0.6424;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:39.10:0,39,418	0/0:2,0:2:6.02:0,6,64	0/0:15,0:13:0.39:0,0,152	0/0:19,0:17:7.40:0,7,214	0/0:4,0:4:9.02:0,9,97	0/0:10,0:10:21.05:0,21,226	0/0:15,0:15:39.06:0,39,402	1/1:3,9:12:23.99:283,24,0	0/0:10,0:10:18.02:0,18,185	0/0:8,0:8:24.06:0,24,258	0/0:8,0:8:21.05:0,21,226	0/0:8,0:8:21.05:0,21,225	0/0:7,0:7:18.05:0,18,193	0/0:8,0:8:18.05:0,18,193	0/0:11,0:11:30.07:0,30,320	0/0:4,0:4:9.02:0,9,97	0/0:19,0:19:51.13:0,51,548	0/0:5,0:5:12.03:0,12,129	0/0:6,0:6:12.01:0,12,120	0/0:4,0:4:12.03:0,12,129	0/0:11,0:11:24.06:0,24,257	0/0:4,0:4:12.03:0,12,129	0/0:10,0:10:27.07:0,27,290	0/0:5,0:5:11.99:0,12,116	0/0:4,0:4:12.03:0,12,129	0/0:8,0:8:24.06:0,24,258	0/0:15,0:15:42.09:0,42,443	0/0:3,0:3:9.02:0,9,97
chr10	66089029	.	G	GT	5840.24	PASS	AB=0.809;AC=53;AF=0.946;AN=56;BaseQRankSum=-4.815;DP=332;FS=7.343;HRun=0;HaplotypeScore=31.2590;InbreedingCoeff=-0.1185;MQ=60.08;MQ0=18;MQRankSum=-1.427;QD=17.59;ReadPosRankSum=0.084;VQSLOD=6.1798;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,15:16:18.06:286,18,0	1/1:0,4:4:3.01:47,3,0	0/1:33,4:11:74.06:187,0,74	0/1:28,2:11:99:114,0,123	1/1:2,16:17:24.08:374,24,0	1/1:1,6:6:3.01:47,3,0	1/1:0,7:7:9.03:142,9,0	1/1:4,0:11:25.28:365,25,0	1/1:0,0:7:6.02:91,6,0	1/1:2,0:11:27.09:372,27,0	1/1:1,0:13:9.03:136,9,0	1/1:0,7:7:15.05:237,15,0	1/1:1,5:6:3.01:48,3,0	0/1:3,7:8:23.63:220,0,24	1/1:0,9:9:9.03:144,9,0	1/1:3,0:6:9.03:132,9,0	1/1:1,11:12:9.03:138,9,0	1/1:3,0:5:12.04:159,12,0	1/1:1,11:11:30.10:479,30,0	1/1:1,6:8:9.03:142,9,0	1/1:0,10:10:6:96,6,0	1/1:0,16:16:21.07:334,21,0	1/1:1,10:11:18.06:286,18,0	1/1:2,8:8:3.01:48,3,0	1/1:1,5:6:3.01:48,3,0	1/1:0,14:14:42.14:667,42,0	1/1:2,10:12:20.61:333,21,0	1/1:2,8:11:12.02:168,12,0
chr10	66089330	.	TCACACACACA	T	363.54	PASS	AC=12;AF=0.400;AN=30;BaseQRankSum=0.101;DP=285;FS=8.116;HRun=0;HaplotypeScore=74.0941;InbreedingCoeff=0.5224;MQ=62.20;MQ0=33;MQRankSum=-2.700;QD=6.61;ReadPosRankSum=-0.264;VQSLOD=0.0537;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:18:15.05:0,15,509	./.	./.	./.	0/0:8,0:8:6.02:0,6,215	1/1:12,3:14:2.96:20,3,0	./.	0/0:14,0:10:6.02:0,6,109	0/0:9,0:9:6.02:0,6,88	0/0:6,0:4:3.01:0,3,135	./.	./.	./.	./.	./.	0/0:6,0:6:6.02:0,6,218	./.	0/0:7,0:7:6.02:0,6,97	1/1:3,1:4:3.01:88,3,0	./.	1/1:15,0:14:3.01:51,3,0	./.	0/0:1,0:1:3.01:0,3,113	0/0:17,0:15:24.97:0,25,977	1/1:8,1:8:6.01:114,6,0	./.	1/1:3,5:9:6.02:158,6,0	1/1:3,0:2:3.01:47,3,0
chr10	66089380	.	AC	A	118.20	PASS	AB=0.900;AC=6;AF=0.136;AN=44;BaseQRankSum=4.149;DP=235;FS=3.826;HRun=1;HaplotypeScore=37.6070;InbreedingCoeff=0.3049;MQ=37.10;MQ0=51;MQRankSum=-1.048;QD=3.11;ReadPosRankSum=-0.779;VQSLOD=-0.4569;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:17:10.45:0,10,321	0/0:1,0:1:3.01:0,3,37	./.	0/0:2,0:1:3.01:0,3,36	0/0:11,0:10:11.95:0,12,127	0/0:15,0:12:11.89:0,12,146	0/0:5,0:3:3.01:0,3,37	0/1:21,0:17:7.90:8,0,198	1/1:1,3:4:7.88:58,8,0	0/0:6,0:2:2.85:0,3,36	./.	./.	0/0:8,0:3:6.02:0,6,74	./.	0/0:4,0:2:6.02:0,6,73	0/1:3,1:3:29.02:29,0,31	0/0:23,0:17:30.05:0,30,349	1/1:3,5:9:20.21:141,20,0	0/0:13,0:11:22.28:0,22,321	./.	0/0:10,0:7:11.86:0,12,146	0/0:4,0:1:3.01:0,3,37	./.	0/0:18,0:15:24.96:0,25,351	0/0:12,0:10:10.21:0,10,139	0/0:12,0:11:33.10:0,33,390	0/0:12,0:9:6.32:0,6,92	0/0:6,0:3:9.01:0,9,97
chr10	66089923	.	A	AC	3032.46	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=0.767;DP=496;FS=21.899;HRun=1;HaplotypeScore=62.6307;InbreedingCoeff=0.9879;MQ=86.87;MQ0=1;MQRankSum=-4.964;QD=36.98;ReadPosRankSum=-2.399;VQSLOD=1.3827;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,117,1500	0/0:7,0:7:21.07:0,21,273	0/0:29,0:29:71.49:0,71,829	0/0:23,0:23:59.89:0,60,749	0/0:21,0:21:63.20:0,63,816	0/0:20,0:20:57.16:0,57,711	0/0:23,0:23:66.15:0,66,821	1/1:1,29:30:87.25:1273,87,0	1/1:1,7:8:18.06:269,18,0	1/1:1,14:15:45.13:645,45,0	1/1:1,9:10:21.07:314,21,0	0/0:16,0:16:48.14:0,48,609	0/0:13,0:13:39.13:0,39,506	0/0:7,0:7:21.07:0,21,272	0/0:16,0:16:45.15:0,45,584	1/1:1,11:12:30.10:448,30,0	0/0:26,0:26:78.24:0,78,995	1/1:1,6:7:18.06:269,18,0	0/0:17,0:17:51.13:0,51,643	0/0:16,0:16:48.16:0,48,621	0/0:26,0:26:75.24:0,75,972	0/0:14,0:14:42.14:0,42,544	0/0:13,0:13:39.13:0,39,506	0/0:30,0:29:87.27:0,87,1111	0/0:15,0:15:45.15:0,45,584	0/0:12,0:12:36.11:0,36,456	0/0:22,0:22:66.21:0,66,856	0/0:5,0:5:12.04:0,12,156
chr10	66089962	.	TAC	T	1040.87	PASS	AB=0.872;AC=18;AF=0.346;AN=52;BaseQRankSum=4.638;DP=561;FS=8.097;HRun=0;HaplotypeScore=88.9630;InbreedingCoeff=-0.2700;MQ=62.62;MQ0=8;MQRankSum=4.711;QD=3.06;ReadPosRankSum=1.463;VQSLOD=1.0929;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:20,23:44:42.11:467,42,0	0/1:6,1:7:27.35:27,0,39	./.	./.	0/1:11,15:29:0.47:370,0,0	0/1:19,1:21:70.23:70,0,214	0/1:21,1:22:6.29:6,0,334	0/0:17,0:17:5.99:0,6,58	0/0:17,0:24:41.19:0,41,357	0/0:21,0:21:42.11:0,42,497	0/1:9,0:9:0:0,0,0	0/1:16,6:22:6.29:6,0,315	0/1:10,2:12:15.63:16,0,183	0/1:12,0:12:17.97:18,0,103	0/1:12,4:16:9.31:9,0,252	0/0:15,0:14:2.99:0,3,24	0/0:27,3:30:2.46:0,2,440	0/0:11,0:11:12.03:0,12,137	0/1:18,2:20:35.06:35,0,242	0/1:16,3:18:30.65:31,0,396	0/1:24,5:27:33.67:34,0,330	0/1:13,0:13:6.40:6,0,279	0/1:11,4:15:12.44:12,0,246	0/1:29,1:30:15.55:16,0,610	0/0:17,0:18:21:0,21,251	0/1:12,6:18:62.50:62,0,141	0/0:26,0:26:7.86:0,8,567	0/0:5,0:5:9.03:0,9,136
chr10	66090554	.	G	GGGGGA	3004.35	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=10.876;DP=542;FS=7.782;HRun=0;HaplotypeScore=105.8559;InbreedingCoeff=0.9450;MQ=66.48;MQ0=18;MQRankSum=-9.340;QD=50.07;ReadPosRankSum=-3.253;VQSLOD=2.5030;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,105,2301	0/0:10,0:10:30.10:0,30,646	0/0:20,0:8:21.07:0,21,417	0/0:38,0:21:33.79:0,34,687	0/0:36,0:36:99:0,102,2253	0/0:22,0:22:66.23:0,66,1440	0/0:18,0:18:54.15:0,54,1169	1/1:2,7:13:36.09:749,36,0	1/1:1,0:11:33.11:682,33,0	1/1:1,4:12:18.04:349,18,0	1/1:1,4:12:21.07:596,21,0	0/0:15,0:15:45.11:0,45,837	0/0:12,0:11:33.11:0,33,735	0/0:18,0:17:51.16:0,51,1108	0/0:30,0:30:84.29:0,84,1910	1/1:1,1:4:12.04:368,12,0	0/0:22,0:22:66.23:0,66,1423	1/1:3,0:6:15.05:444,15,0	0/0:18,0:18:51.17:0,51,1049	0/0:26,0:26:78.25:0,78,1694	0/0:14,0:14:39.13:0,39,877	0/0:20,0:20:60.21:0,60,1350	0/0:19,0:19:57.20:0,57,1277	0/0:24,0:24:72.25:0,72,1617	0/0:19,0:19:57.20:0,57,1290	0/0:25,0:26:1.66:0,2,1529	0/0:24,0:24:72.25:0,72,1581	0/0:13,0:13:39.13:0,39,871
chr10	66090771	.	ATTAG	A	5604.55	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=14.581;DP=631;FS=13.602;HRun=0;HaplotypeScore=115.1806;InbreedingCoeff=0.9957;MQ=83.07;MQ0=0;MQRankSum=-14.756;QD=55.49;ReadPosRankSum=-0.390;VQSLOD=5.5456;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,129,3461	0/0:9,0:9:27.09:0,27,755	0/0:22,0:23:58.36:0,58,1375	0/0:19,0:19:47.71:0,48,1193	0/0:40,0:40:99:0,117,3272	0/0:22,0:22:66.23:0,66,1847	0/0:19,0:19:57.14:0,57,1349	1/1:2,24:26:72.25:1427,72,0	1/1:0,18:18:54.19:1077,54,0	1/1:0,27:26:75.26:1493,75,0	1/1:0,10:10:30.10:597,30,0	0/0:17,0:17:51.18:0,51,1393	0/0:14,0:14:39.13:0,39,1059	0/0:10,0:10:27.08:0,27,678	0/0:23,0:23:66.23:0,66,1825	1/1:0,12:12:36.12:711,36,0	0/0:40,0:40:99:0,117,3179	1/1:1,7:8:15.05:299,15,0	0/0:19,0:19:57.18:0,57,1451	0/0:28,0:28:81.28:0,81,2268	0/0:44,0:44:99:0,132,3695	0/0:22,0:22:66.23:0,66,1847	0/0:26,0:26:75.26:0,75,2098	0/0:22,0:22:66.23:0,66,1812	0/0:32,0:32:96.33:0,96,2676	0/0:29,1:30:30.43:0,30,2370	0/0:19,0:19:57.20:0,57,1575	0/0:8,0:8:24.08:0,24,648
chr10	66090988	.	C	CA	4814.77	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=0.255;DP=730;FS=2.142;HRun=1;HaplotypeScore=76.8779;InbreedingCoeff=0.9784;MQ=88.95;MQ0=0;MQRankSum=-0.774;QD=35.93;ReadPosRankSum=-1.668;VQSLOD=4.5327;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,150,1932	0/0:8,0:8:24.04:0,24,269	0/0:37,0:36:96.20:0,96,1169	0/0:35,0:35:77.01:0,77,1030	0/0:34,0:33:96.27:0,96,1199	0/0:31,0:31:87.25:0,87,1094	0/0:37,0:37:99:0,111,1424	1/1:1,24:25:72.20:989,72,0	1/1:1,18:19:42.14:621,42,0	1/1:1,31:32:87.23:1190,87,0	1/1:1,12:13:27.02:373,27,0	0/0:25,0:25:75.22:0,75,946	0/0:30,0:30:87.27:0,87,1115	0/0:20,0:20:57.10:0,57,717	0/0:30,0:30:87.22:0,87,1107	1/1:0,23:23:57.19:842,57,0	0/0:38,0:38:99:0,111,1385	1/1:0,22:21:54.18:799,54,0	0/0:24,0:24:60.19:0,60,768	0/0:22,0:22:57.17:0,57,726	0/0:36,0:36:99:0,105,1334	0/0:14,0:14:42.09:0,42,491	0/0:23,0:23:66.20:0,66,841	0/0:25,0:25:75.22:0,75,943	0/0:19,0:19:45.15:0,45,583	0/0:31,1:32:46.06:0,46,1036	0/0:23,0:23:63.16:0,63,797	0/0:2,0:2:6.02:0,6,78
chr10	66091375	.	T	TA	1762.91	PASS	AB=0.938;AC=11;AF=0.204;AN=54;BaseQRankSum=-5.137;DP=334;FS=11.122;HRun=8;HaplotypeScore=40.1581;InbreedingCoeff=0.7995;MQ=69.98;MQ0=1;MQRankSum=-2.875;QD=19.37;ReadPosRankSum=-0.264;VQSLOD=2.0483;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:45.01:0,45,406	0/0:4,0:4:9:0,9,82	0/1:14,1:13:23.62:24,0,82	0/0:8,0:6:14.84:0,15,133	0/0:14,0:14:23.99:0,24,214	0/0:9,0:9:18:0,18,163	0/0:18,0:18:47.99:0,48,430	1/1:2,19:20:51.14:578,51,0	0/0:6,0:6:9:0,9,82	1/1:7,8:14:30.08:335,30,0	1/1:6,10:16:24.07:277,24,0	0/0:10,0:10:14.98:0,15,133	0/0:11,0:11:29.99:0,30,266	0/0:6,0:6:15.01:0,15,137	0/0:10,0:10:21.01:0,21,192	1/1:2,4:6:15.04:169,15,0	0/0:25,0:25:69.01:0,69,624	1/1:2,16:18:48.14:554,48,0	0/0:16,0:16:27.01:0,27,247	0/0:16,0:16:39.01:0,39,357	0/0:3,0:3:9:0,9,82	./.	0/0:10,0:10:27.01:0,27,247	0/0:17,0:17:48.02:0,48,439	0/0:14,0:14:36:0,36,323	0/0:14,1:15:7.43:0,7,322	0/0:12,0:12:36.02:0,36,329	0/0:2,0:2:6:0,6,55
chr10	66091451	.	T	TC	1668.18	PASS	AB=0.909;AC=13;AF=0.232;AN=56;BaseQRankSum=9.979;DP=363;FS=6.033;HRun=3;HaplotypeScore=45.3579;InbreedingCoeff=0.7839;MQ=53.66;MQ0=7;MQRankSum=-7.648;QD=20.59;ReadPosRankSum=-1.746;VQSLOD=2.4269;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:45.14:0,45,539	0/0:9,0:9:21.06:0,21,252	0/0:18,0:5:15:0,15,162	0/0:14,0:3:4.91:0,5,21	0/0:17,0:17:45.13:0,45,528	0/0:11,0:11:33.10:0,33,396	0/0:14,0:14:39.10:0,39,456	1/1:6,14:19:39.13:540,39,0	1/1:0,10:10:27.09:378,27,0	1/1:1,14:14:39.13:540,39,0	1/1:5,12:17:14.51:209,15,0	0/0:6,0:6:12.04:0,12,144	0/0:7,0:7:21.06:0,21,252	0/0:15,0:15:42.13:0,42,504	0/0:9,0:9:24.07:0,24,288	1/1:0,2:2:3.01:42,3,0	0/0:27,1:27:72.22:0,72,863	1/1:3,4:7:9.03:125,9,0	0/0:15,0:14:39.12:0,39,467	0/0:18,0:17:45.10:0,45,524	0/0:3,0:3:9.03:0,9,108	0/0:2,0:2:6.02:0,6,72	0/0:17,0:17:51.13:0,51,588	0/0:17,1:18:48.15:0,48,575	0/0:16,0:16:39.12:0,39,468	0/1:9,1:10:11.11:11,0,294	0/0:21,0:21:57.17:0,57,684	0/0:6,0:5:9.03:0,9,108
chr10	66091476	.	G	GA	1401.86	PASS	AB=0.849;AC=12;AF=0.214;AN=56;BaseQRankSum=1.195;DP=381;FS=10.908;HRun=10;HaplotypeScore=45.8944;InbreedingCoeff=0.5366;MQ=61.68;MQ0=3;MQRankSum=-4.326;QD=11.78;ReadPosRankSum=-4.882;VQSLOD=0.3881;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,3:20:15.82:0,16,333	0/0:7,0:7:14.96:0,15,122	0/1:16,1:9:10.70:11,0,71	0/0:11,0:4:5.86:0,6,49	0/0:19,0:19:40.33:0,40,339	0/1:10,1:11:17.38:17,0,134	0/0:13,0:13:15.76:0,16,251	1/1:7,14:20:21.03:350,21,0	0/0:9,0:9:26.97:0,27,222	1/1:3,14:16:36.07:375,36,0	1/1:4,14:18:43.33:438,43,0	0/0:8,0:8:17.98:0,18,148	0/0:6,0:6:17.98:0,18,148	0/0:15,0:15:32.94:0,33,268	0/0:8,0:8:17.96:0,18,146	1/1:0,5:5:12.03:128,12,0	0/0:26,0:27:54.35:0,54,546	0/1:7,6:13:15.82:236,0,16	0/0:19,1:20:18.95:0,19,362	0/0:20,0:20:47.91:0,48,394	0/0:4,0:4:11.99:0,12,99	0/0:3,0:3:8.99:0,9,74	0/0:16,0:16:41.92:0,42,341	0/0:16,0:16:44.90:0,45,362	0/0:14,0:14:38.94:0,39,318	0/1:14,3:17:19:19,0,275	0/0:17,0:17:47.46:0,47,367	0/0:8,0:8:17.96:0,18,148
chr10	66091584	.	C	CGT	1072.69	PASS	AB=0.947;AC=30;AF=0.600;AN=50;BaseQRankSum=0.340;DP=510;FS=1.855;HRun=0;HaplotypeScore=80.4398;InbreedingCoeff=0.2422;MQ=56.38;MQ0=13;MQRankSum=-1.144;QD=3.22;ReadPosRankSum=-0.367;VQSLOD=2.1044;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:33:27.05:0,27,243	0/0:4,3:7:3:0,3,32	./.	./.	0/0:17,0:17:9.02:0,9,97	1/1:15,0:14:6.02:87,6,0	0/0:14,1:15:8.27:0,8,40	0/1:25,0:24:1.10:24,0,1	0/1:16,0:16:6.68:117,0,7	1/1:32,0:30:6.27:93,6,0	1/1:20,0:20:5.99:51,6,0	./.	0/0:10,0:10:1.55:0,2,4	1/1:8,3:10:2.84:44,3,0	0/1:12,0:12:15.18:77,0,15	1/1:13,0:13:3:25,3,0	1/1:27,0:26:7.31:159,7,0	1/1:16,0:17:10.70:72,11,0	1/1:20,0:19:9.79:177,10,0	0/1:16,1:17:26.16:38,0,26	1/1:17,0:17:3.01:37,3,0	0/0:13,0:13:3:0,3,32	0/0:14,0:14:6:0,6,56	0/1:22,0:22:6.76:7,0,89	0/1:11,0:17:20.16:20,0,26	1/1:17,1:17:11.92:116,12,0	1/1:25,0:25:6.31:38,6,0	1/1:7,2:9:3.01:44,3,0
chr10	66091586	.	T	TGTGTGTGTGTAC	1954.39	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=-3.083;DP=515;FS=10.740;HRun=0;HaplotypeScore=160.9720;InbreedingCoeff=0.7793;MQ=53.82;MQ0=15;MQRankSum=-0.941;QD=15.89;ReadPosRankSum=-2.164;VQSLOD=1.1906;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:30:43.16:0,43,1030	0/0:7,0:7:9.03:0,9,199	0/0:20,0:15:12.09:0,12,312	0/0:30,0:12:24.04:0,24,352	0/0:17,0:17:39.13:0,39,701	0/0:15,0:14:19.12:0,19,225	0/1:16,0:15:1.88:2,0,202	1/1:26,0:25:16.69:541,17,0	0/0:17,0:16:26.64:0,27,424	1/1:32,0:30:27.57:798,28,0	1/1:19,0:19:6.02:147,6,0	0/0:15,0:14:27.09:0,27,407	0/0:10,0:10:21.96:0,22,317	0/0:13,0:12:11.96:0,12,189	0/0:13,0:13:22.24:0,22,331	1/1:4,9:13:3.01:180,3,0	0/0:26,0:25:53.95:0,54,672	1/1:17,0:17:9.78:443,10,0	0/0:20,0:19:4.30:0,4,250	0/0:16,0:16:30.10:0,30,474	0/0:20,0:20:27.09:0,27,400	0/0:13,0:13:24.08:0,24,388	0/0:14,0:14:30.10:0,30,500	0/0:23,0:23:10:0,10,636	0/0:17,0:17:26.83:0,27,381	0/0:19,0:18:37.48:0,37,511	0/0:26,0:26:54.74:0,55,693	0/0:9,0:9:24.06:0,24,345
chr10	66091594	.	T	TAC	447.49	PASS	AB=1.000;AC=6;AF=0.107;AN=56;BaseQRankSum=2.191;DP=509;FS=3.201;HRun=0;HaplotypeScore=78.8499;InbreedingCoeff=0.4704;MQ=51.78;MQ0=21;MQRankSum=-0.499;QD=5.81;ReadPosRankSum=1.784;VQSLOD=2.6773;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:31:66.19:0,66,960	0/0:6,0:6:9.03:0,9,140	0/0:22,0:12:33.08:0,33,461	0/0:38,0:11:30.10:0,30,464	0/0:18,0:17:42.14:0,42,649	0/0:16,0:15:31.13:0,31,423	0/0:14,0:13:17.82:0,18,233	0/1:27,0:26:49.88:50,0,453	1/1:2,14:16:26.94:489,27,0	0/0:28,0:26:5:0,5,357	0/1:19,0:19:14.50:22,0,14	0/0:14,0:13:27.08:0,27,393	0/0:10,0:10:27.04:0,27,361	0/0:11,0:10:13.86:0,14,189	0/0:13,0:13:22.08:0,22,291	1/1:14,0:14:2.22:7,2,0	0/0:27,0:26:67.09:0,67,863	0/0:15,0:15:8.90:0,9,166	0/0:18,0:17:42.89:0,43,488	0/0:13,0:13:32.14:0,32,467	0/0:21,0:21:38.90:0,39,539	0/0:12,0:12:24.08:0,24,369	0/0:13,0:13:33.11:0,33,509	0/0:25,0:25:51.16:0,51,762	0/0:16,0:16:30.08:0,30,441	0/0:16,0:15:44.63:0,45,587	0/0:24,0:24:63.12:0,63,844	0/0:9,0:9:22.62:0,23,310
chr10	66091596	.	T	TAC	1288.85	PASS	AB=0.685;AC=6;AF=0.107;AN=56;BaseQRankSum=-4.581;DP=509;FS=8.100;HRun=0;HaplotypeScore=76.6451;InbreedingCoeff=0.1447;MQ=50.09;MQ0=23;MQRankSum=0.915;QD=12.39;ReadPosRankSum=0.179;VQSLOD=2.7214;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:33:69.16:0,69,981	0/0:6,0:6:9.03:0,9,141	0/0:20,0:9:15.10:0,15,349	0/0:39,0:11:27.09:0,27,419	0/0:17,0:16:39.13:0,39,604	0/0:16,0:15:31.13:0,31,424	0/0:15,0:14:17.82:0,18,233	0/1:16,10:26:99:430,0,393	0/0:17,0:16:15.54:0,16,150	0/1:8,19:26:99:640,0,117	0/1:5,14:19:14.49:37,0,14	0/0:15,0:14:30.09:0,30,432	0/0:9,0:9:24.08:0,24,362	0/0:11,0:10:13.86:0,14,189	0/0:14,0:14:24.91:0,25,333	1/1:14,0:14:3.01:31,3,0	0/0:27,0:26:70.14:0,70,913	0/1:13,2:15:99:271,0,114	0/0:16,0:16:39.71:0,40,463	0/0:13,0:13:29.13:0,29,421	0/0:21,0:21:38.92:0,39,564	0/0:12,0:12:24.08:0,24,368	0/0:13,0:13:33.11:0,33,507	0/0:25,0:25:51.16:0,51,765	0/0:15,0:15:27.07:0,27,397	0/0:16,0:15:44.63:0,45,588	0/0:24,0:24:63.02:0,63,833	0/0:9,0:9:22.60:0,23,298
chr10	66092158	.	C	CG	4096.66	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-4.138;DP=581;FS=22.431;HRun=3;HaplotypeScore=58.1561;InbreedingCoeff=0.9920;MQ=86.45;MQ0=1;MQRankSum=-1.467;QD=35.62;ReadPosRankSum=-1.007;VQSLOD=1.4384;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:39:99:0,111,1329	0/0:4,0:4:12.04:0,12,144	0/0:15,0:15:39.09:0,39,440	0/0:28,0:28:54.27:0,54,691	0/0:33,0:33:96.29:0,96,1148	0/0:18,0:18:54.15:0,54,627	0/0:25,0:25:72.15:0,72,813	1/1:3,29:32:84.23:1104,84,0	1/1:0,14:14:36.12:502,36,0	1/1:1,23:24:69.22:947,69,0	1/1:1,14:15:39.13:538,39,0	0/0:22,0:22:63.16:0,63,740	0/0:24,0:24:66.14:0,66,760	0/0:14,0:14:42.13:0,42,503	0/0:20,0:20:57.14:0,57,668	1/1:1,15:16:39.13:545,39,0	0/0:18,0:18:54.15:0,54,634	1/1:1,13:14:33.11:461,33,0	0/0:19,0:19:51.60:0,52,581	0/0:23,0:23:63.14:0,63,728	0/0:39,0:39:99:0,108,1276	0/0:18,0:18:48.15:0,48,575	0/0:19,0:19:57.17:0,57,682	0/0:16,0:16:45.14:0,45,539	0/0:23,0:23:63.19:0,63,752	0/0:23,0:23:66.20:0,66,790	0/0:19,0:19:54.01:0,54,599	0/0:6,0:6:18.06:0,18,216
chr10	66092490	.	T	TG	3477.66	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=8.017;DP=571;FS=0.000;HRun=6;HaplotypeScore=63.5144;InbreedingCoeff=0.9469;MQ=89.32;MQ0=0;MQRankSum=-3.603;QD=29.22;ReadPosRankSum=0.353;VQSLOD=4.1297;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,108,1094	0/0:10,0:10:24.05:0,24,245	0/0:24,0:24:28.79:0,29,432	0/0:21,0:21:45.47:0,45,443	0/0:26,0:26:72.16:0,72,732	0/0:24,0:24:63.10:0,63,626	0/0:24,0:24:60.13:0,60,611	1/1:7,10:17:2.49:340,2,0	1/1:0,19:19:45.14:564,45,0	1/1:1,25:26:75.24:939,75,0	1/1:1,20:21:18.18:466,18,0	0/0:12,0:12:36.08:0,36,365	0/0:22,0:22:60.11:0,60,603	0/0:16,0:16:42.08:0,42,425	0/0:24,0:24:63.14:0,63,642	1/1:0,22:22:57.18:716,57,0	0/0:17,0:17:47.82:0,48,489	1/1:1,13:14:36.12:453,36,0	0/0:15,0:15:42.08:0,42,422	0/0:22,0:22:63.14:0,63,641	0/0:20,0:20:48.10:0,48,489	0/0:20,0:20:54.12:0,54,550	0/0:22,0:22:53.95:0,54,546	0/0:21,0:21:60.10:0,60,602	0/0:18,0:18:51.11:0,51,520	0/0:22,0:22:60.13:0,60,611	0/0:28,0:28:78.17:0,78,794	0/0:5,0:5:9.02:0,9,92
chr10	66092778	.	A	AT	5860.80	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=3.686;DP=611;FS=7.243;HRun=0;HaplotypeScore=64.4237;InbreedingCoeff=0.9992;MQ=89.05;MQ0=0;MQRankSum=-4.103;QD=45.08;ReadPosRankSum=0.475;VQSLOD=4.8876;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,123,1682	0/0:10,0:10:27.06:0,27,343	0/0:25,0:25:75.13:0,75,932	0/0:22,0:22:66.08:0,66,842	0/0:29,0:29:84.28:0,84,1173	0/0:21,0:21:60.20:0,60,839	0/0:10,0:10:30.09:0,30,405	1/1:2,28:30:84.29:1326,84,0	1/1:0,18:18:54.18:861,54,0	1/1:0,32:32:96.33:1526,96,0	1/1:0,19:19:48.16:767,48,0	0/0:20,0:20:60.20:0,60,837	0/0:16,0:16:48.15:0,48,655	0/0:21,0:21:63.20:0,63,864	0/0:27,0:27:81.27:0,81,1133	1/1:0,19:19:54.18:863,54,0	0/0:23,0:23:66.19:0,66,901	1/1:1,11:12:33.11:518,33,0	0/0:26,0:26:72.22:0,72,988	0/0:21,0:20:60.20:0,60,838	0/0:25,0:25:75.24:0,75,1029	0/0:24,0:24:72.22:0,72,973	0/0:20,0:20:60.19:0,60,822	0/0:19,0:19:57.18:0,57,780	0/0:22,0:22:66.22:0,66,923	0/0:28,0:28:81.26:0,81,1117	0/0:21,0:21:63.17:0,63,851	0/0:8,0:8:24.08:0,24,336
chr10	66092895	.	A	AGTTGGACCTCT	15107.61	PASS	AB=0.941;AC=13;AF=0.232;AN=56;BaseQRankSum=-7.595;DP=666;FS=17.975;HRun=0;HaplotypeScore=199.4464;InbreedingCoeff=0.8936;MQ=70.06;MQ0=0;MQRankSum=-14.042;QD=98.74;ReadPosRankSum=-1.205;VQSLOD=3.4953;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:57:99:0,172,5719	0/0:5,0:5:12.01:0,12,342	0/0:29,0:29:77.27:0,77,2161	0/0:16,0:14:39.13:0,39,1238	0/0:32,0:32:81.23:0,81,2425	0/0:28,0:28:81.26:0,81,2744	0/0:18,0:18:48.16:0,48,1708	1/1:13,8:23:66.19:2734,66,0	1/1:3,13:19:48.16:2725,48,0	1/1:8,13:23:57.18:2850,57,0	1/1:12,17:34:75.21:3680,75,0	0/0:20,0:20:54.19:0,54,1891	0/0:15,0:15:45.15:0,45,1605	0/0:21,0:21:63.20:0,63,2146	0/0:22,0:22:66.23:0,66,2356	1/1:3,6:11:27.09:1550,27,0	0/0:26,0:26:75.19:0,75,2505	1/1:1,7:9:24.08:1317,24,0	0/0:19,0:19:51.18:0,51,1678	0/0:33,0:33:81.25:0,81,2714	0/0:39,0:39:99:0,114,3762	0/0:26,0:26:72.25:0,72,2502	0/0:21,0:21:48.15:0,48,1629	0/0:21,0:21:63.18:0,63,1928	0/0:14,0:14:36.12:0,36,1282	0/1:30,2:32:99:252,0,2769	0/0:32,0:32:96.33:0,96,3402	0/0:19,0:19:57.20:0,57,1912
chr10	66093414	.	A	ACTTAGGAGCCAGGAAGACCCCGGCAG	36820.31	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=7.615;DP=770;FS=2.302;HRun=0;HaplotypeScore=476.0864;InbreedingCoeff=0.9935;MQ=78.01;MQ0=0;MQRankSum=-17.506;QD=211.61;ReadPosRankSum=-0.785;VQSLOD=4.3437;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:65,0:65:99:0,193,11732	0/0:9,0:9:27.07:0,27,1533	0/0:23,0:23:60.09:0,60,2540	0/0:28,0:28:35.64:0,36,3353	0/0:27,0:27:81.26:0,81,4773	0/0:23,0:23:66.21:0,66,4164	0/0:32,0:32:96.29:0,96,5105	1/1:33,0:33:90.30:4780,90,0	1/1:27,7:34:99:9098,99,0	1/1:34,1:38:99:8758,114,0	1/1:13,4:22:54.14:4031,54,0	0/0:27,0:27:75.26:0,75,4796	0/0:20,0:20:57.20:0,57,3371	0/0:25,0:25:66.21:0,66,4032	0/0:27,0:27:81.28:0,81,4885	1/1:17,5:25:63.22:5495,63,0	0/0:27,0:27:81.28:0,81,5244	1/1:13,4:22:48.16:4659,48,0	0/0:22,0:22:66.08:0,66,3425	0/0:28,0:28:81.28:0,81,5051	0/0:55,0:55:99:0,160,9713	0/0:21,0:21:60.19:0,60,3280	0/0:23,0:23:69.24:0,69,4543	0/0:35,0:35:99:0,102,5572	0/0:20,0:20:60.19:0,60,3735	0/0:34,0:34:96.33:0,96,5655	0/0:21,0:21:63.22:0,63,3933	0/0:4,0:4:12.04:0,12,782
chr10	66093901	.	CA	C	2647.92	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=9.201;DP=527;FS=1.479;HRun=1;HaplotypeScore=52.3305;InbreedingCoeff=0.9980;MQ=80.45;MQ0=0;MQRankSum=-2.712;QD=29.75;ReadPosRankSum=-1.325;VQSLOD=3.0341;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:66.13:0,66,898	0/0:12,0:12:36.10:0,36,494	0/0:20,1:21:40.27:0,40,673	0/0:18,0:18:50.51:0,51,586	0/0:21,0:21:63.19:0,63,879	0/0:23,0:23:69.20:0,69,937	0/0:26,0:26:78.22:0,78,1057	1/1:18,0:18:33.88:241,34,0	1/1:0,10:10:27.09:373,27,0	1/1:1,19:20:60.14:796,60,0	1/1:0,14:14:39.08:506,39,0	0/0:16,0:16:48.12:0,48,647	0/0:12,0:12:36.12:0,36,512	0/0:17,0:17:51.07:0,51,681	0/0:28,0:28:84.24:0,84,1158	1/1:0,9:9:21.07:293,21,0	0/0:14,0:14:42.14:0,42,599	1/1:0,18:18:45.15:626,45,0	0/0:21,0:21:63.21:0,63,886	0/0:41,0:41:99:0,123,1617	0/0:16,0:16:48.15:0,48,666	0/0:25,0:25:75.22:0,75,1030	0/0:14,0:14:42.10:0,42,546	0/0:14,0:14:39.06:0,39,497	0/0:15,0:15:45.11:0,45,587	0/0:22,0:22:63.14:0,63,836	0/0:32,0:32:96.23:0,96,1306	0/0:7,0:7:21.07:0,21,300
chr10	66095538	.	C	CT	5310.65	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=13.226;DP=719;FS=9.007;HRun=5;HaplotypeScore=83.3259;InbreedingCoeff=0.9987;MQ=86.67;MQ0=0;MQRankSum=-4.640;QD=33.19;ReadPosRankSum=-1.764;VQSLOD=4.2009;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,123,1285	0/0:8,0:8:21.05:0,21,226	0/0:26,0:26:66.15:0,66,697	0/0:24,0:24:48.75:0,49,511	0/0:21,0:21:51.13:0,51,548	0/0:18,0:18:48.05:0,48,501	0/0:22,0:22:51.12:0,51,548	1/1:4,28:32:87.22:1063,87,0	1/1:1,28:29:75.24:987,75,0	1/1:4,20:24:63.18:796,63,0	1/1:1,21:22:53.92:691,54,0	0/0:28,0:28:78.19:0,78,838	0/0:24,0:24:63.13:0,63,661	0/0:28,0:28:75.17:0,75,796	0/0:28,0:28:78.18:0,78,832	1/1:3,20:23:57.19:749,57,0	0/0:29,0:29:81.19:0,81,862	1/1:4,26:30:78.25:1026,78,0	0/0:17,0:17:39.09:0,39,419	0/0:22,0:22:66.10:0,66,695	0/0:37,0:37:96.24:0,96,1032	0/0:22,0:22:66.15:0,66,701	0/0:16,0:16:45.11:0,45,484	0/0:42,0:42:99:0,120,1272	0/0:25,0:25:75.19:0,75,804	0/0:34,1:35:47.73:0,48,857	0/0:36,0:36:99:0,102,1096	0/0:8,0:8:24.06:0,24,258
chr10	66095928	.	T	TC	826.93	PASS	AB=0.806;AC=11;AF=0.196;AN=56;BaseQRankSum=5.899;DP=456;FS=1.328;HRun=5;HaplotypeScore=66.9985;InbreedingCoeff=0.7227;MQ=88.33;MQ0=0;MQRankSum=0.968;QD=8.44;ReadPosRankSum=-4.025;VQSLOD=-0.6734;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:81.20:0,81,863	0/0:7,0:7:21.03:0,21,214	0/0:32,0:31:72.15:0,72,760	0/1:22,0:22:2.30:2,0,353	0/0:13,0:13:39.10:0,39,419	0/0:13,0:13:36.06:0,36,370	0/0:20,0:20:51.11:0,51,537	1/1:2,15:17:43.41:479,43,0	0/1:5,5:10:0.40:193,0,0	1/1:13,0:13:10.33:78,10,0	0/1:6,0:9:17.41:46,0,17	0/0:20,0:20:51.12:0,51,543	0/0:15,0:15:45.10:0,45,473	0/0:19,0:19:57.14:0,57,605	0/0:12,0:12:30.08:0,30,322	1/1:3,1:14:17.44:120,17,0	0/0:25,0:25:63.15:0,63,675	1/1:2,0:13:14.20:72,14,0	0/0:16,0:16:39.49:0,39,394	0/0:16,0:16:42.10:0,42,451	0/0:17,0:17:45.09:0,45,474	0/0:12,0:12:36.09:0,36,385	0/0:15,0:15:42.11:0,42,450	0/0:24,0:24:57.09:0,57,592	0/0:17,0:17:45.02:0,45,457	0/0:20,0:20:57.14:0,57,606	0/0:14,0:14:39.10:0,39,417	0/0:3,0:3:6.01:0,6,64
chr10	66096355	.	AT	A	470.17	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=1.125;DP=348;FS=2.039;HRun=1;HaplotypeScore=51.6309;InbreedingCoeff=0.4946;MQ=60.41;MQ0=0;MQRankSum=-1.305;QD=17.41;ReadPosRankSum=-2.432;VQSLOD=3.1335;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:36.12:0,36,515	0/0:4,0:4:12.04:0,12,174	0/0:9,0:8:18.05:0,18,239	0/0:10,0:10:24.07:0,24,328	0/0:24,0:24:54.94:0,55,879	0/0:10,0:10:30.10:0,30,409	0/0:12,0:12:33.09:0,33,453	0/0:21,0:21:1.65:0,2,89	1/1:0,13:13:39.13:540,39,0	0/1:14,0:14:35.36:35,0,70	0/0:24,0:24:56.98:0,57,254	0/0:7,0:7:21.07:0,21,290	0/0:7,0:7:21.07:0,21,279	0/0:7,0:7:21.06:0,21,278	0/0:9,0:9:27.09:0,27,393	0/0:5,0:5:13.65:0,14,63	0/0:15,0:15:45.15:0,45,624	0/0:5,0:5:9.02:0,9,131	0/0:11,0:11:33.07:0,33,427	0/0:25,0:25:68.80:0,69,936	0/0:4,0:4:12.04:0,12,167	0/0:12,0:12:36.04:0,36,472	0/0:17,0:17:48.06:0,48,629	0/0:4,0:4:12.04:0,12,167	0/0:19,0:19:54.05:0,54,710	0/0:15,0:15:44.31:0,44,555	0/0:16,0:16:48.16:0,48,674	0/0:15,0:15:42:0,42,556
chr10	66096723	.	T	TA	1623.68	PASS	AB=0.735;AC=21;AF=0.404;AN=52;BaseQRankSum=-2.696;DP=449;FS=18.767;HRun=1;HaplotypeScore=140.7234;InbreedingCoeff=0.3977;MQ=38.93;MQ0=18;MQRankSum=-1.382;QD=10.75;ReadPosRankSum=-4.360;VQSLOD=-0.3577;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:35:68.47:0,68,827	1/1:1,2:2:5.98:65,6,0	./.	./.	0/0:22,0:20:17.84:0,18,235	1/1:8,12:17:29.26:352,29,0	1/1:3,5:6:1.25:165,1,0	0/0:44,0:41:99:0,113,1266	0/0:31,0:28:45.42:0,45,573	0/0:27,0:24:62.37:0,62,683	0/0:3,0:3:2.24:0,2,38	1/1:7,7:13:5.94:41,6,0	0/0:18,0:18:48.16:0,48,622	0/1:11,7:18:18.03:148,0,18	0/0:23,0:21:38.78:0,39,460	0/0:20,0:17:36.99:0,37,448	0/0:18,0:17:20.24:0,20,202	0/0:15,0:13:27.31:0,27,289	0/1:7,2:7:71.25:71,0,133	1/1:0,1:1:2.97:20,3,0	1/1:6,7:11:8.94:85,9,0	1/1:6,1:7:3.01:44,3,0	0/0:20,0:19:33.09:0,33,413	0/0:15,0:15:33.09:0,33,413	0/1:6,3:9:62.95:94,0,63	0/1:9,10:18:99:399,0,177	0/1:17,10:24:99:267,0,191	1/1:2,1:2:3.01:45,3,0
chr10	66096728	.	AGAT	A	242.85	PASS	AB=0.933;AC=5;AF=0.104;AN=48;BaseQRankSum=0.219;DP=455;FS=8.725;HRun=0;HaplotypeScore=160.5705;InbreedingCoeff=0.1606;MQ=38.12;MQ0=16;MQRankSum=0.901;QD=2.31;ReadPosRankSum=-4.408;VQSLOD=0.1661;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:38,2:36:99:118,0,1189	0/0:3,0:2:3:0,3,46	./.	./.	0/1:18,4:20:42.89:43,0,372	0/0:22,0:19:16.58:0,17,191	0/0:9,0:7:11.08:0,11,99	0/0:44,0:41:99:0,99,1549	0/0:32,0:29:47.99:0,48,579	0/0:26,0:23:65.46:0,65,937	0/0:4,0:4:3.90:0,4,60	0/0:16,0:15:2.98:0,3,33	0/0:18,0:18:48.16:0,48,798	0/0:19,0:19:5.55:0,6,78	1/1:24,0:22:21.92:155,22,0	0/0:20,0:17:41.57:0,42,686	0/1:19,0:18:43.74:44,0,62	0/0:13,0:11:29.96:0,30,381	0/0:10,0:8:21.92:0,22,259	./.	0/0:13,0:11:2.82:0,3,46	./.	0/0:19,0:18:30.10:0,30,591	0/0:13,0:13:27.09:0,27,596	0/0:8,0:8:11.62:0,12,167	0/0:22,0:21:46.20:0,46,513	0/0:25,0:22:27.94:0,28,353	0/0:2,0:1:3.01:0,3,47
chr10	66096735	.	TA	T	3133.51	PASS	AB=0.733;AC=27;AF=0.614;AN=44;BaseQRankSum=5.633;DP=418;FS=11.861;HRun=2;HaplotypeScore=134.8426;InbreedingCoeff=0.1004;MQ=37.84;MQ0=16;MQRankSum=-3.189;QD=9.08;ReadPosRankSum=-1.393;VQSLOD=-0.0076;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:34,5:36:99:208,0,566	./.	./.	./.	0/1:17,4:19:38.68:230,0,39	1/1:3,16:16:8.86:117,9,0	0/0:1,5:4:1.81:0,2,7	1/1:23,0:20:14.56:131,15,0	1/1:6,25:28:43.02:580,43,0	0/1:14,10:21:20.15:320,0,20	0/1:2,2:4:6.19:35,0,6	1/1:3,13:15:2.85:39,3,0	0/0:18,0:18:49.98:0,50,706	1/1:3,16:19:5.74:64,6,0	0/1:6,16:20:0:0,0,0	0/1:15,4:16:27.63:82,0,28	0/1:10,5:15:2.71:3,0,17	1/1:5,8:11:30.04:329,30,0	0/1:6,4:8:90.22:157,0,90	./.	1/1:7,5:10:3:25,3,0	./.	0/0:19,0:18:29.97:0,30,362	0/0:14,0:14:21.60:0,22,273	0/1:4,4:8:28.70:29,0,34	1/1:3,20:22:1.94:642,2,0	1/1:5,20:23:25.94:289,26,0	./.
chr10	66096736	.	AAGATAGAT	A	2659.27	PASS	AB=1.000;AC=26;AF=0.542;AN=48;BaseQRankSum=-1.979;DP=414;FS=8.169;HRun=0;HaplotypeScore=169.9544;InbreedingCoeff=0.6390;MQ=38.14;MQ0=16;MQRankSum=-4.920;QD=14.00;ReadPosRankSum=-5.183;VQSLOD=0.1794;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:36:16.62:0,17,91	./.	./.	./.	0/0:21,0:19:2.77:0,3,15	1/1:20,0:17:11.50:134,11,0	1/1:7,0:5:6.02:90,6,0	0/0:16,0:14:27.83:0,28,288	0/0:31,0:28:0.77:0,1,16	0/0:26,0:23:19.46:0,19,200	0/1:4,0:4:0.03:0,0,0	1/1:15,0:14:8.73:114,9,0	0/0:18,0:18:33.11:0,33,949	1/1:18,0:18:26.63:308,27,0	1/1:20,0:18:11.56:80,12,0	0/0:19,0:16:2.83:0,3,18	0/1:18,0:17:34.43:45,0,34	0/0:13,0:11:0.35:0,0,1	1/1:11,0:9:12.04:267,12,0	1/1:0,7:7:2.97:20,3,0	1/1:11,0:10:17.85:168,18,0	./.	0/0:20,0:19:23.43:0,23,570	0/0:14,0:14:17.99:0,18,202	1/1:9,0:9:5.48:89,5,0	1/1:23,0:22:33.11:785,33,0	1/1:25,0:22:38.58:681,39,0	1/1:2,0:1:3.01:45,3,0
chr10	66096737	.	AG	A	1299.88	PASS	AB=0.957;AC=22;AF=0.478;AN=46;BaseQRankSum=6.026;DP=415;FS=4.169;HRun=1;HaplotypeScore=142.1067;InbreedingCoeff=0.0858;MQ=38.12;MQ0=17;MQRankSum=-4.813;QD=4.15;ReadPosRankSum=1.121;VQSLOD=0.4473;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:41,1:38:39.79:40,0,596	./.	./.	./.	0/1:21,0:19:25.03:105,0,25	1/1:20,0:17:8.91:62,9,0	0/0:7,0:5:2.83:0,3,24	0/1:11,5:13:99:162,0,102	1/1:29,2:28:46.19:274,46,0	0/1:23,2:22:99:153,0,170	0/1:5,0:5:6.65:7,0,44	1/1:15,0:14:2.97:21,3,0	0/0:18,0:18:51.07:0,51,777	1/1:18,0:18:2.67:22,3,0	0/1:20,0:18:0:0,0,0	0/1:17,2:16:38.81:39,0,177	0/0:19,0:18:8.68:0,9,74	1/1:13,0:11:22.37:120,22,0	0/1:11,0:8:50.38:50,0,140	./.	0/1:11,0:10:0.01:0,0,0	./.	0/0:20,0:19:35.85:0,36,483	0/0:14,0:14:26.91:0,27,282	0/0:9,0:9:2.17:0,2,94	0/1:22,0:21:43.45:278,0,43	1/1:24,0:22:15.12:115,15,0	0/0:2,0:1:3:0,3,25
chr10	66096813	.	A	AT	2313.67	PASS	AB=1.000;AC=12;AF=0.214;AN=56;BaseQRankSum=-6.436;DP=457;FS=0.465;HRun=9;HaplotypeScore=75.5092;InbreedingCoeff=0.7181;MQ=64.07;MQ0=0;MQRankSum=0.716;QD=19.44;ReadPosRankSum=-4.686;VQSLOD=2.1960;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:25:56.01:0,56,475	0/0:1,0:1:3:0,3,26	0/0:11,0:10:9.88:0,10,61	0/1:6,0:5:9.86:10,0,37	0/0:17,0:17:38.99:0,39,337	0/0:19,0:19:50.97:0,51,442	0/0:13,0:12:23.98:0,24,208	1/1:10,25:35:75.19:820,75,0	1/1:7,0:13:17.17:91,17,0	1/1:7,20:28:49.13:755,49,0	1/1:0,16:16:45.12:494,45,0	0/0:17,0:17:14.60:0,15,287	0/0:11,0:11:9.80:0,10,145	0/0:18,0:18:38.98:0,39,338	0/0:15,1:16:2.80:0,3,253	1/1:1,9:10:30.03:310,30,0	0/0:23,0:23:56.96:0,57,491	0/0:17,0:16:35.97:0,36,311	0/0:9,0:9:23.99:0,24,208	0/0:17,0:17:29.98:0,30,260	0/0:16,0:15:29.98:0,30,260	0/0:9,0:9:20.98:0,21,178	0/0:9,0:9:23.98:0,24,208	0/1:10,0:10:10.73:11,0,135	0/0:13,0:13:23.96:0,24,208	0/0:30,0:30:68.48:0,68,569	0/0:26,0:26:65.98:0,66,573	0/0:21,0:21:56.98:0,57,495
chr10	66097072	.	A	AT	906.20	PASS	AB=0.727;AC=9;AF=0.173;AN=52;BaseQRankSum=4.128;DP=280;FS=3.623;HRun=0;HaplotypeScore=43.7721;InbreedingCoeff=0.5094;MQ=44.70;MQ0=40;MQRankSum=-6.212;QD=17.43;ReadPosRankSum=-1.315;VQSLOD=5.1510;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:12:22.70:0,23,290	0/0:1,0:1:3.01:0,3,42	0/0:15,0:1:2.22:0,2,7	0/0:18,0:6:1.98:0,2,30	0/0:10,0:7:9.03:0,9,123	0/0:16,0:13:29.96:0,30,390	0/0:7,0:7:20.98:0,21,244	1/1:8,20:24:68.92:748,69,0	1/1:2,4:5:8.24:77,8,0	0/1:5,3:7:20.50:146,0,21	1/1:5,1:3:2.97:35,3,0	0/0:5,0:5:12.04:0,12,164	0/0:3,0:3:9:0,9,91	./.	0/0:7,0:4:8.96:0,9,84	1/1:3,1:3:2.95:36,3,0	0/0:36,0:31:53.51:0,54,855	0/0:20,0:13:23.87:0,24,246	0/0:12,0:12:35.91:0,36,468	0/0:6,0:6:17.94:0,18,183	0/0:6,0:4:11.95:0,12,108	./.	0/0:3,0:2:3.01:0,3,41	0/0:9,0:4:1.82:0,2,5	0/0:1,0:1:3.01:0,3,42	0/0:10,0:9:27.05:0,27,336	0/0:9,0:7:18.06:0,18,250	0/0:16,0:13:30.05:0,30,393
chr10	66097083	.	AAAT	A	1620.17	PASS	AB=0.563;AC=11;AF=0.204;AN=54;BaseQRankSum=4.171;DP=268;FS=4.458;HRun=0;HaplotypeScore=47.9887;InbreedingCoeff=0.5285;MQ=47.91;MQ0=27;MQRankSum=-3.007;QD=23.48;ReadPosRankSum=-2.890;VQSLOD=2.5936;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:11:27.08:0,27,569	0/0:2,0:2:6.02:0,6,121	1/1:16,0:1:2.80:13,3,0	0/0:22,0:8:2.83:0,3,156	0/0:10,0:7:18.06:0,18,286	0/0:14,0:12:21.03:0,21,405	0/0:5,0:5:12.04:0,12,211	1/1:6,27:29:74.12:1137,74,0	1/1:2,2:3:9.03:127,9,0	0/1:2,7:8:20.51:261,0,21	1/1:2,3:4:9.03:132,9,0	0/0:6,0:6:12.04:0,12,198	0/0:1,0:1:3.01:0,3,69	0/0:1,0:1:3.01:0,3,36	0/0:3,0:1:3.01:0,3,69	1/1:0,2:2:6.02:99,6,0	0/0:32,0:27:63.69:0,64,1395	0/0:23,0:18:19.90:0,20,264	0/0:15,0:15:39.13:0,39,823	0/0:3,0:3:9.03:0,9,193	0/0:7,0:5:8.99:0,9,159	./.	0/0:2,0:1:3.01:0,3,33	0/0:6,0:2:3.01:0,3,58	0/0:1,0:1:3.01:0,3,69	0/0:8,0:8:24.08:0,24,467	0/0:7,0:7:18.06:0,18,411	0/0:17,0:15:36.12:0,36,800
chr10	66097090	.	TAAAATA	T	113.20	PASS	AB=0.696;AC=3;AF=0.056;AN=54;BaseQRankSum=1.637;DP=242;FS=0.000;HRun=0;HaplotypeScore=59.8280;InbreedingCoeff=0.0862;MQ=51.86;MQ0=18;MQRankSum=-2.377;QD=3.43;ReadPosRankSum=-0.115;VQSLOD=1.1432;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:11:30.10:0,30,877	0/0:2,0:2:6.02:0,6,201	1/1:17,0:1:1.82:5,2,0	0/0:22,0:8:12.12:0,12,276	0/0:8,0:6:18.06:0,18,424	0/0:11,0:10:12.03:0,12,428	0/0:2,0:2:3:0,3,107	0/0:30,0:27:78.22:0,78,1457	0/0:3,0:2:5.21:0,5,31	0/0:11,0:11:23.16:0,23,378	0/0:6,0:6:15.05:0,15,321	0/0:2,0:2:6.02:0,6,210	0/0:1,0:1:3.01:0,3,107	0/0:1,0:1:3.01:0,3,81	0/0:3,0:1:3.01:0,3,107	0/0:3,0:3:9.03:0,9,200	0/0:28,0:26:58.01:0,58,1893	0/1:9,7:12:37.56:186,0,38	0/0:16,0:16:45.15:0,45,1335	0/0:3,0:3:9.01:0,9,162	0/0:4,0:3:5.14:0,5,212	./.	0/0:3,0:2:6.02:0,6,160	0/0:3,0:2:3.01:0,3,102	0/0:3,0:3:9.03:0,9,269	0/0:7,0:7:18:0,18,488	0/0:8,0:8:21.07:0,21,527	0/0:14,0:14:36.12:0,36,1270
chr10	66098107	.	GGA	G	1715.73	PASS	AB=0.963;AC=11;AF=0.196;AN=56;BaseQRankSum=2.196;DP=391;FS=2.717;HRun=0;HaplotypeScore=51.2042;InbreedingCoeff=0.8255;MQ=58.85;MQ0=25;MQRankSum=-7.812;QD=19.95;ReadPosRankSum=-0.678;VQSLOD=3.3738;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:39.06:0,39,593	0/0:3,0:3:9.03:0,9,159	0/0:26,0:4:0.69:0,1,26	0/1:25,1:5:6.62:7,0,8	0/0:22,0:22:63.15:0,63,1079	0/0:16,0:15:36.11:0,36,685	0/0:12,0:9:21:0,21,338	1/1:5,13:18:51.03:701,51,0	1/1:5,3:8:17.68:215,18,0	1/1:2,6:8:24.07:345,24,0	1/1:7,9:16:32.75:343,33,0	0/0:10,0:10:18.05:0,18,327	0/0:8,0:8:18.04:0,18,285	0/0:14,0:14:42.12:0,42,767	0/0:14,0:13:36.05:0,36,479	1/1:5,5:9:20.79:279,21,0	0/0:31,0:30:72.61:0,73,1228	0/0:9,0:9:24.01:0,24,363	0/0:7,0:7:21:0,21,305	0/0:17,0:17:45.15:0,45,858	0/0:8,0:6:6.02:0,6,120	0/0:12,0:12:30.03:0,30,403	0/0:12,0:12:30.02:0,30,514	0/0:9,0:8:18.03:0,18,293	0/0:7,0:7:18.06:0,18,363	0/0:17,0:17:48.11:0,48,921	0/0:17,0:17:42.10:0,42,739	0/0:18,0:14:24.03:0,24,351
chr10	66098150	.	AT	A	1918.35	PASS	AB=0.970;AC=13;AF=0.232;AN=56;BaseQRankSum=4.025;DP=453;FS=5.983;HRun=9;HaplotypeScore=74.6777;InbreedingCoeff=0.8530;MQ=73.52;MQ0=3;MQRankSum=-3.950;QD=13.51;ReadPosRankSum=-1.157;VQSLOD=3.3180;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:36.19:0,36,633	0/0:2,0:2:6.02:0,6,69	0/1:30,1:17:2.68:3,0,70	0/0:29,1:15:3.66:0,4,85	0/0:28,0:28:69.19:0,69,785	0/0:17,0:17:48.12:0,48,542	0/0:10,0:10:16.67:0,17,225	1/1:8,22:30:62.96:577,63,0	1/1:2,8:10:14.97:137,15,0	1/1:5,12:17:36:329,36,0	1/1:8,18:26:56.90:510,57,0	0/0:8,0:8:21.06:0,21,242	0/0:5,0:5:15.04:0,15,172	0/0:12,0:12:27.08:0,27,312	0/0:13,0:13:36.11:0,36,415	1/1:3,9:12:27.01:247,27,0	0/0:36,0:36:86.89:0,87,955	1/1:3,12:15:33:300,33,0	0/0:11,0:11:30.09:0,30,346	0/0:20,0:20:51.12:0,51,566	0/0:4,0:4:6.02:0,6,69	0/0:6,0:6:14.63:0,15,147	0/0:19,0:19:54.16:0,54,622	0/0:11,0:11:21.02:0,21,228	0/0:15,0:15:35.29:0,35,374	0/0:13,0:13:30.09:0,30,345	0/0:17,0:17:48.13:0,48,543	0/0:9,0:9:19.27:0,19,189
chr10	66098290	.	A	AAAC	3167.95	PASS	AB=0.821;AC=6;AF=0.107;AN=56;BaseQRankSum=9.172;DP=561;FS=5.109;HRun=0;HaplotypeScore=91.1008;InbreedingCoeff=0.1543;MQ=68.77;MQ0=0;MQRankSum=-5.374;QD=27.31;ReadPosRankSum=3.180;VQSLOD=3.7565;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,156,2375	0/0:6,0:6:18.05:0,18,266	0/0:16,0:13:30.48:0,30,372	0/0:23,0:20:54.13:0,54,685	0/0:18,0:18:48.13:0,48,696	0/0:14,0:14:36.08:0,36,582	0/0:21,0:21:60.16:0,60,851	0/1:23,11:34:90.88:919,0,91	0/1:20,4:24:34.21:689,0,34	0/1:17,3:20:35.86:607,0,36	1/1:18,0:17:5.03:710,5,0	0/0:15,0:15:39.13:0,39,619	0/0:11,0:11:30.09:0,30,471	0/0:24,0:24:69.17:0,69,1086	0/0:19,0:18:57.15:0,57,797	0/1:15,5:19:66.40:364,0,66	0/0:22,0:22:57.15:0,57,803	0/0:29,0:28:75.20:0,75,1163	0/0:30,0:30:81.26:0,81,1251	0/0:17,0:17:47.89:0,48,697	0/0:23,0:23:66.19:0,66,989	0/0:20,0:20:57.19:0,57,918	0/0:10,0:10:30.09:0,30,457	0/0:25,0:25:75.22:0,75,1126	0/0:10,0:10:30.08:0,30,446	0/0:17,0:17:3.29:0,3,740	0/0:18,0:18:45.15:0,45,751	0/0:4,0:4:12.04:0,12,205
chr10	66098292	.	A	AC	978.33	PASS	AB=0.650;AC=5;AF=0.089;AN=56;BaseQRankSum=11.977;DP=549;FS=8.139;HRun=0;HaplotypeScore=74.2548;InbreedingCoeff=-0.0996;MQ=69.00;MQ0=0;MQRankSum=-4.975;QD=8.98;ReadPosRankSum=2.952;VQSLOD=3.3244;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,150,2041	0/0:6,0:6:18.05:0,18,236	0/0:16,0:13:28.42:0,28,349	0/0:23,0:20:53.16:0,53,580	0/0:17,0:17:48.13:0,48,623	0/0:14,0:14:42.08:0,42,534	0/0:20,0:20:60.16:0,60,788	0/1:21,10:31:99:232,0,319	0/1:7,14:21:99:255,0,111	0/1:10,11:21:99:225,0,188	0/1:3,15:17:34.31:262,0,34	0/0:14,0:14:39.13:0,39,545	0/0:10,0:10:30.09:0,30,404	0/0:24,0:24:69.17:0,69,925	0/0:21,0:20:57.15:0,57,734	0/1:10,8:17:99:122,0,203	0/0:21,0:21:60.08:0,60,760	0/0:27,0:26:75.22:0,75,1025	0/0:30,0:30:87.21:0,87,1161	0/0:16,0:16:40:0,40,619	0/0:23,0:23:66.19:0,66,873	0/0:20,0:20:57.18:0,57,782	0/0:10,0:10:30.09:0,30,404	0/0:25,0:25:75.22:0,75,998	0/0:11,0:11:30.09:0,30,389	0/0:16,1:17:33.02:0,33,653	0/0:17,0:17:45.15:0,45,629	0/0:4,0:4:12.04:0,12,168
chr10	66098297	.	A	AAAC	3082.44	PASS	AB=0.690;AC=7;AF=0.125;AN=56;BaseQRankSum=10.963;DP=549;FS=4.970;HRun=0;HaplotypeScore=87.6328;InbreedingCoeff=0.4058;MQ=75.15;MQ0=0;MQRankSum=-4.936;QD=29.08;ReadPosRankSum=0.434;VQSLOD=3.7377;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,149,2359	0/0:5,0:5:15.05:0,15,247	0/0:19,0:16:26.74:0,27,387	0/0:25,0:22:47.06:0,47,606	0/0:16,0:16:48.05:0,48,703	0/0:13,0:13:39.10:0,39,595	0/0:18,0:18:54.15:0,54,842	0/1:19,10:29:46.27:717,0,46	1/1:7,14:21:0.80:735,1,0	0/1:9,11:20:9.81:638,0,10	1/1:4,15:18:17.43:734,17,0	0/0:17,0:17:45.12:0,45,694	0/0:10,0:10:30.09:0,30,471	0/0:25,0:25:72.18:0,72,1089	0/0:18,0:17:54.11:0,54,816	0/1:9,8:16:35.05:389,0,35	0/0:21,0:21:57.16:0,57,886	0/0:26,0:25:75.21:0,75,1180	0/0:31,0:31:90.28:0,90,1415	0/0:17,0:17:50.50:0,51,744	0/0:23,0:23:66.18:0,66,1021	0/0:19,0:19:54.18:0,54,894	0/0:9,0:9:27.09:0,27,447	0/0:24,0:24:72.21:0,72,1139	0/0:12,0:12:33.08:0,33,475	0/0:20,1:21:10.88:0,11,821	0/0:18,0:18:48.15:0,48,770	0/0:4,0:4:12.04:0,12,199
chr10	66098544	.	CAT	C	5564.70	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=14.501;DP=665;FS=4.485;HRun=0;HaplotypeScore=82.9166;InbreedingCoeff=0.9997;MQ=85.02;MQ0=0;MQRankSum=-2.109;QD=45.61;ReadPosRankSum=-0.723;VQSLOD=6.0159;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,126,2557	0/0:13,0:13:39.13:0,39,792	0/0:26,0:26:78.26:0,78,1530	0/0:23,0:23:63.20:0,63,1213	0/0:29,0:29:84.29:0,84,1705	0/0:28,0:28:84.29:0,84,1706	0/0:24,0:24:72.23:0,72,1415	1/1:0,30:30:87.30:1414,87,0	1/1:0,25:25:66.23:1073,66,0	1/1:0,28:28:81.28:1317,81,0	1/1:0,22:22:60.20:978,60,0	0/0:19,0:19:57.15:0,57,1105	0/0:20,0:20:60.21:0,60,1218	0/0:20,0:20:60.21:0,60,1207	0/0:23,0:23:69.24:0,69,1400	1/1:0,17:17:48.16:783,48,0	0/0:22,0:22:66.23:0,66,1341	0/0:17,0:17:51.18:0,51,1036	0/0:19,0:19:57.20:0,57,1151	0/0:25,0:25:75.26:0,75,1521	0/0:41,0:41:99:0,120,2402	0/0:26,0:26:78.27:0,78,1584	0/0:23,0:23:69.24:0,69,1399	0/0:27,0:27:81.28:0,81,1642	0/0:18,0:18:54.19:0,54,1093	0/0:24,1:25:26.53:0,27,1407	0/0:21,0:21:63.22:0,63,1279	0/0:12,0:12:36.12:0,36,731
chr10	66099813	.	A	AAG	2313	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=3.306;DP=503;FS=0.965;HRun=0;HaplotypeScore=77.6990;InbreedingCoeff=0.9841;MQ=70.78;MQ0=8;MQRankSum=0.425;QD=22.68;ReadPosRankSum=3.947;VQSLOD=3.6687;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:31:80.16:0,80,833	0/0:6,0:5:14.77:0,15,103	0/0:14,0:13:20:0,20,277	0/0:18,0:15:12.93:0,13,198	0/0:16,0:14:38.82:0,39,361	0/0:16,0:16:45.02:0,45,484	0/0:12,0:11:31.60:0,32,349	1/1:4,23:29:51.78:774,52,0	1/1:0,1:21:41.43:216,41,0	1/1:3,12:16:36.65:453,37,0	1/1:1,15:17:35.75:494,36,0	0/0:19,0:19:52.72:0,53,477	0/0:7,0:7:16.84:0,17,163	0/0:17,0:17:50.03:0,50,474	0/0:18,0:16:41.93:0,42,429	1/1:1,15:18:36.37:552,36,0	0/0:36,0:35:93.09:0,93,978	0/0:16,0:16:40.22:0,40,378	0/0:11,0:11:32.86:0,33,294	0/0:18,0:17:47.77:0,48,456	0/0:18,0:18:51.10:0,51,580	0/0:13,0:12:35.21:0,35,304	0/0:12,0:11:26.93:0,27,292	0/0:36,0:36:85.20:0,85,747	0/0:14,0:14:38.76:0,39,347	0/0:20,0:20:56.88:0,57,507	0/0:24,0:24:71.58:0,72,648	0/0:8,0:7:17.87:0,18,190
chr10	66100117	.	A	ACAC	1681.05	PASS	AB=0.890;AC=29;AF=0.537;AN=54;BaseQRankSum=2.205;DP=425;FS=16.134;HRun=0;HaplotypeScore=277.8073;InbreedingCoeff=0.1716;MQ=39.22;MQ0=1;MQRankSum=0.663;QD=5.62;ReadPosRankSum=0.731;VQSLOD=0.9751;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:25:4.48:0,4,67	1/1:5,1:7:7.78:61,8,0	0/1:4,0:2:2.26:2,0,18	0/0:13,0:8:1.40:0,1,35	0/0:22,0:22:3.38:0,3,12	1/1:11,5:19:19.81:196,20,0	0/1:19,3:24:45.96:86,0,46	0/0:6,0:6:11.65:0,12,70	1/1:5,3:8:8.95:98,9,0	0/1:13,0:12:26.93:27,0,42	0/1:5,0:5:0.03:0,0,0	1/1:20,5:27:17.59:241,18,0	0/1:16,0:16:31.65:32,0,264	1/1:11,10:23:20.76:296,21,0	1/1:20,6:29:17.14:167,17,0	0/1:7,0:7:0:0,0,0	0/1:10,2:11:13.05:35,0,13	0/0:12,0:11:19.13:0,19,118	0/1:9,2:11:29.05:109,0,29	0/1:13,3:15:0.28:0,0,0	0/0:17,1:20:2.71:0,3,21	1/1:16,5:18:2.83:39,3,0	1/1:16,0:16:2.18:12,2,0	0/0:26,0:26:6.24:0,6,66	1/1:5,2:7:2.84:14,3,0	0/1:10,2:13:4.57:166,0,5	0/1:11,6:18:6.67:253,0,7	./.
chr10	66100244	.	CCA	C	205.85	PASS	AB=0.996;AC=6;AF=0.107;AN=56;BaseQRankSum=2.232;DP=949;FS=7.812;HRun=0;HaplotypeScore=194.3861;InbreedingCoeff=0.2250;MQ=55.96;MQ0=14;MQRankSum=-1.719;QD=1.56;ReadPosRankSum=-1.025;VQSLOD=1.7528;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:51:94.69:0,95,1800	0/0:6,0:6:12.04:0,12,187	0/1:55,1:27:1.67:2,0,441	0/0:64,0:31:38.49:0,38,577	0/0:29,0:29:72.23:0,72,1159	0/0:22,0:22:51.17:0,51,802	0/0:43,0:44:99:0,102,1574	0/1:20,0:20:99:147,0,152	0/1:9,0:9:15.89:16,0,19	0/1:35,0:33:72.13:72,0,149	0/0:11,0:11:5.80:0,6,37	0/0:32,0:32:81.17:0,81,1263	0/0:21,1:22:19.71:0,20,843	0/0:29,0:29:45.35:0,45,945	0/0:36,0:36:78.22:0,78,1213	1/1:11,0:11:8.99:86,9,0	0/0:35,0:34:78.24:0,78,1260	0/0:11,0:11:8.20:0,8,53	0/0:25,0:26:54.01:0,54,816	0/0:28,0:30:66.22:0,66,1066	0/0:106,6:115:99:0,100,3604	0/0:32,0:32:84.20:0,84,1374	0/0:23,0:23:54.18:0,54,855	0/0:72,0:71:99:0,135,2147	0/0:25,1:26:35.76:0,36,1091	0/0:54,1:56:99:0,113,2235	0/0:24,0:24:66.21:0,66,1022	0/0:18,0:18:33.30:0,33,658
chr10	66100250	.	A	ACACACAC	3699	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-0.133;DP=954;FS=16.263;HRun=0;HaplotypeScore=267.7888;InbreedingCoeff=0.8884;MQ=55.84;MQ0=15;MQRankSum=-5.160;QD=34.90;ReadPosRankSum=-5.049;VQSLOD=1.5487;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:54:99:0,125,2732	0/0:6,0:6:12.04:0,12,263	0/0:54,0:26:7.68:0,8,611	0/0:64,0:31:9.12:0,9,817	0/0:28,0:28:72.23:0,72,1706	0/0:20,0:20:51.17:0,51,1179	0/0:46,0:46:95.07:0,95,2344	1/1:8,17:32:77.22:1965,77,0	1/1:5,5:11:6.02:217,6,0	1/1:14,17:32:11.24:951,11,0	1/1:0,10:10:6.02:218,6,0	0/0:34,0:34:81.27:0,81,1864	0/0:25,0:24:63.14:0,63,1377	0/0:30,0:30:45.35:0,45,1345	0/0:32,0:32:81.27:0,81,1849	1/1:10,0:10:9:107,9,0	0/0:36,0:35:75.03:0,75,1916	1/1:3,6:9:8.24:241,8,0	0/0:28,0:26:45.14:0,45,1207	0/0:29,0:29:68.88:0,69,1618	0/0:114,0:114:99:0,255,5759	0/0:34,0:34:93.08:0,93,2168	0/0:24,0:24:57.19:0,57,1274	0/0:68,0:67:99:0,144,3091	0/0:27,0:27:72.25:0,72,1720	0/0:56,0:56:99:0,150,3352	0/0:23,0:23:66.21:0,66,1453	0/0:15,0:15:37.24:0,37,966
chr10	66100395	.	A	ACG	2128.52	PASS	AB=0.867;AC=7;AF=0.125;AN=56;BaseQRankSum=9.235;DP=868;FS=30.457;HRun=0;HaplotypeScore=186.8088;InbreedingCoeff=0.4299;MQ=46.18;MQ0=68;MQRankSum=-10.012;QD=13.47;ReadPosRankSum=-3.473;VQSLOD=1.1711;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:49:99:0,112,1619	0/0:7,0:6:11.96:0,12,154	0/0:47,0:3:3:0,3,28	0/0:71,0:5:6.02:0,6,78	0/0:16,0:16:26.90:0,27,351	0/0:24,0:22:63.15:0,63,872	0/0:35,0:33:78.18:0,78,1077	0/1:47,13:54:99:904,0,218	1/1:18,6:23:6.35:296,6,0	0/1:33,6:30:61.69:804,0,62	1/1:10,1:11:4.89:113,5,0	0/0:32,0:30:81.12:0,81,1088	0/0:17,0:17:45.10:0,45,639	0/0:25,0:24:59.62:0,60,833	0/0:26,0:25:62.92:0,63,810	0/1:15,0:14:0.71:138,0,1	0/0:35,0:35:99:0,102,1408	0/0:13,0:11:26.65:0,27,194	0/0:25,0:18:50.80:0,51,518	0/0:19,0:17:24.91:0,25,324	0/0:105,0:95:99:0,222,3172	0/0:14,0:13:11.95:0,12,133	0/0:16,0:15:14.86:0,15,199	0/0:57,0:57:99:0,127,2152	0/0:11,0:10:15.04:0,15,228	0/0:40,0:34:8.59:0,9,1077	0/0:18,0:17:36.12:0,36,543	0/0:4,0:4:11.50:0,12,123
chr10	66100398	.	CCA	C	123.97	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=10.010;DP=871;FS=12.543;HRun=0;HaplotypeScore=188.0858;InbreedingCoeff=0.3470;MQ=45.53;MQ0=67;MQRankSum=-8.348;QD=0.62;ReadPosRankSum=-1.676;VQSLOD=1.5002;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:48:93.14:0,93,1403	0/0:9,0:7:9.03:0,9,122	0/0:46,0:4:8.82:0,9,56	0/0:69,1:4:5.95:0,6,56	0/0:15,0:15:17.92:0,18,290	0/0:24,1:23:60.13:0,60,906	0/0:31,1:30:28.42:0,28,933	0/1:65,0:54:61.35:61,0,308	0/1:24,0:26:2.60:3,0,61	0/1:42,0:30:99:112,0,157	0/1:11,0:11:0.12:0,0,0	0/0:33,0:31:65.06:0,65,1084	0/0:17,0:17:48.15:0,48,738	0/0:25,1:25:3.39:0,3,606	0/0:26,0:25:55.06:0,55,830	1/1:13,0:14:10.37:39,10,0	0/0:36,2:38:60.85:0,61,1468	1/1:13,0:11:8.02:33,8,0	0/1:24,0:17:1.26:1,0,394	0/0:18,0:17:24.05:0,24,322	0/0:105,0:96:99:0,201,2975	0/0:12,0:11:12:0,12,177	0/0:16,0:15:11.88:0,12,164	0/0:57,1:58:84.52:0,85,1896	0/0:11,0:10:15.05:0,15,233	0/0:39,0:34:29.79:0,30,973	0/0:21,0:19:41.86:0,42,587	0/0:3,0:3:3.29:0,3,95
chr10	66100408	.	ACACAC	A	1661.62	PASS	AB=0.960;AC=10;AF=0.179;AN=56;BaseQRankSum=12.490;DP=888;FS=13.163;HRun=0;HaplotypeScore=226.4207;InbreedingCoeff=0.4087;MQ=45.96;MQ0=71;MQRankSum=-11.608;QD=7.76;ReadPosRankSum=-1.905;VQSLOD=1.3060;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:49:99:0,102,2488	0/0:9,0:7:9.03:0,9,222	0/0:46,0:6:15.03:0,15,219	0/0:78,0:6:12.51:0,13,230	0/0:18,0:18:18.98:0,19,538	0/0:25,0:23:60.20:0,60,1754	0/0:38,0:36:84.23:0,84,2045	0/1:60,7:55:99:806,0,357	0/1:30,0:28:25.83:42,0,26	0/1:40,3:31:50.95:672,0,51	1/1:9,0:9:2.09:5,2,0	0/0:31,0:29:72.25:0,72,1950	0/0:16,0:16:48.16:0,48,1339	0/0:25,0:24:60.18:0,60,1418	0/0:28,0:25:60.20:0,60,1609	1/1:12,0:11:15.18:153,15,0	0/0:38,0:38:70.60:0,71,2671	1/1:10,0:8:16.28:89,16,0	0/0:22,0:19:34.97:0,35,1043	0/0:19,0:18:22.38:0,22,612	0/0:107,0:99:99:0,222,5513	0/0:12,0:11:11.93:0,12,365	0/0:16,0:15:15.01:0,15,283	0/0:54,0:53:99:0,118,3417	0/0:10,0:9:17.97:0,18,409	0/1:43,0:37:42.60:43,0,1924	0/0:24,0:22:55.67:0,56,1347	0/0:6,0:6:14.21:0,14,353
chr10	66100410	.	ACAC	A	1845.26	PASS	AB=0.970;AC=12;AF=0.214;AN=56;BaseQRankSum=12.731;DP=884;FS=11.703;HRun=0;HaplotypeScore=200.5178;InbreedingCoeff=0.2744;MQ=45.85;MQ0=72;MQRankSum=-11.953;QD=6.19;ReadPosRankSum=-0.759;VQSLOD=1.9155;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:47:99:0,102,1937	0/0:8,0:6:9.03:0,9,175	0/0:47,0:6:15.03:0,15,198	0/1:80,0:6:4.90:5,0,180	0/0:19,0:19:20.06:0,20,418	0/0:24,0:22:60.20:0,60,1321	0/0:35,0:34:83.45:0,83,1580	0/1:64,1:53:99:616,0,348	0/1:26,5:29:21.42:215,0,21	0/1:42,0:31:93.11:680,0,93	1/1:8,0:8:1.10:3,1,0	0/0:30,0:28:75.25:0,75,1492	0/0:17,0:17:51.17:0,51,1063	0/0:25,0:24:59.39:0,59,1071	0/0:29,0:26:63.21:0,63,1246	1/1:12,0:11:20.85:227,21,0	0/0:38,0:38:69.67:0,70,2026	1/1:8,2:8:8.90:135,9,0	0/0:22,0:19:49.89:0,50,820	0/0:18,0:17:22.70:0,23,465	0/0:110,0:102:99:0,237,4449	0/0:10,0:9:11.93:0,12,270	0/0:16,0:15:15.01:0,15,236	0/0:53,1:53:99:0,120,2651	0/0:10,0:9:17.97:0,18,312	0/1:42,0:36:97.18:97,0,1468	0/0:24,0:22:55.67:0,56,1038	0/1:6,0:6:19.18:19,0,247
chr10	66100411	.	C	CG	104.40	PASS	AB=0.869;AC=4;AF=0.071;AN=56;BaseQRankSum=7.132;DP=885;FS=6.419;HRun=0;HaplotypeScore=190.0801;InbreedingCoeff=0.3237;MQ=45.83;MQ0=72;MQRankSum=-6.079;QD=2.05;ReadPosRankSum=1.130;VQSLOD=2.5347;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:48:99:0,108,1493	0/0:8,0:6:12.04:0,12,161	0/0:47,0:6:15.03:0,15,164	0/0:79,0:6:14.08:0,14,168	0/0:21,0:21:21.37:0,21,294	0/0:24,0:22:66.22:0,66,911	0/0:35,0:33:84.11:0,84,1137	0/0:61,2:52:46.55:0,47,816	0/1:24,7:29:65.90:112,0,66	0/0:42,0:31:33.42:0,33,414	1/1:8,0:8:0.28:2,0,0	0/0:30,0:28:75.23:0,75,1027	0/0:17,0:17:51.15:0,51,690	0/0:26,0:25:60.03:0,60,805	0/0:29,0:26:66.20:0,66,898	0/1:11,1:11:2.86:81,0,3	0/0:38,0:38:99:0,108,1452	0/0:10,0:8:16.19:0,16,98	0/0:22,0:19:51:0,51,669	0/0:19,0:17:24.44:0,24,329	0/0:110,0:101:99:0,246,3287	0/0:10,0:9:12.04:0,12,167	0/0:16,0:15:15.05:0,15,203	0/0:54,0:53:99:0,140,1898	0/0:11,0:10:15.05:0,15,204	0/0:42,0:36:65.29:0,65,1128	0/0:24,0:22:54.07:0,54,722	0/0:6,0:6:7.06:0,7,193
chr10	66100413	.	C	CGAG	218.92	PASS	AB=0.875;AC=4;AF=0.071;AN=56;BaseQRankSum=7.334;DP=889;FS=3.217;HRun=0;HaplotypeScore=210.9909;InbreedingCoeff=0.1060;MQ=45.87;MQ0=68;MQRankSum=-5.858;QD=4.47;ReadPosRankSum=0.822;VQSLOD=2.6016;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:47:99:0,105,1870	0/0:9,0:6:9.03:0,9,167	0/0:48,0:7:15.02:0,15,195	0/0:85,0:6:0.84:0,1,161	0/0:22,0:22:22.13:0,22,394	0/0:26,0:24:66.20:0,66,1164	0/0:37,0:36:87.24:0,87,1518	0/0:60,0:50:19.50:0,19,827	0/1:31,0:29:82.52:155,0,83	0/0:35,3:27:0.87:0,1,410	1/1:4,2:6:0.11:1,0,0	0/0:31,0:29:75.26:0,75,1382	0/0:17,0:17:51.15:0,51,901	0/0:26,0:25:63.18:0,63,1067	0/0:28,0:25:63.22:0,63,1163	0/1:8,1:11:15.04:152,0,15	0/0:39,0:39:99:0,111,1953	0/0:9,0:8:9.98:0,10,101	0/0:24,0:21:52.99:0,53,885	0/0:19,0:17:24.51:0,25,410	0/0:108,0:100:99:0,240,4201	0/0:10,0:9:12.04:0,12,221	0/0:15,0:14:15.01:0,15,243	0/0:55,0:55:99:0,143,2513	0/0:12,0:11:23.16:0,23,291	0/0:40,1:35:28.46:0,28,1449	0/0:23,0:21:57.04:0,57,978	0/0:6,0:6:14.37:0,14,274
chr10	66100424	.	C	CG	44.99	PASS	AB=0.908;AC=4;AF=0.071;AN=56;BaseQRankSum=5.720;DP=884;FS=2.357;HRun=0;HaplotypeScore=188.0895;InbreedingCoeff=0.1863;MQ=46.24;MQ0=60;MQRankSum=-4.858;QD=0.92;ReadPosRankSum=0.110;VQSLOD=2.7539;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:45:99:0,106,1466	0/0:8,0:6:9.03:0,9,126	0/0:66,0:12:35.98:0,36,445	0/0:85,0:7:15.04:0,15,184	0/0:22,0:22:24.38:0,24,337	0/0:26,0:25:72.24:0,72,1006	0/0:41,0:40:99:0,108,1466	0/0:63,0:53:73.21:0,73,1172	0/1:24,7:29:70.30:70,0,176	0/0:31,0:25:50.55:0,51,443	1/1:6,0:6:0.61:2,1,0	0/0:26,0:24:63.21:0,63,879	0/0:15,0:15:45.12:0,45,609	0/0:24,0:24:63.20:0,63,857	0/0:24,0:21:57.19:0,57,796	0/1:12,0:11:34.40:63,0,34	0/0:39,0:39:99:0,108,1452	0/0:8,0:8:10.68:0,11,69	0/0:26,0:24:69.17:0,69,909	0/0:17,0:15:21.43:0,21,295	0/0:102,0:96:99:0,247,3418	0/0:12,0:12:18.06:0,18,251	0/0:15,0:14:18.06:0,18,252	0/0:51,0:50:99:0,133,1754	0/0:12,0:12:21.07:0,21,291	0/0:41,0:36:99:0,102,1303	0/0:22,0:20:57.01:0,57,724	0/0:9,0:9:26.58:0,27,344
chr10	66100425	.	AT	A	835.90	PASS	AB=0.833;AC=9;AF=0.161;AN=56;BaseQRankSum=11.242;DP=879;FS=4.983;HRun=1;HaplotypeScore=181.0787;InbreedingCoeff=0.1868;MQ=46.53;MQ0=58;MQRankSum=-10.995;QD=5.36;ReadPosRankSum=-0.332;VQSLOD=0.1789;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,1:45:99:0,105,1622	0/0:7,0:5:9.03:0,9,142	0/0:65,2:12:36.07:0,36,426	0/0:79,6:7:15.04:0,15,179	0/0:22,0:22:23.62:0,24,382	0/0:25,0:25:72.25:0,72,1146	0/0:40,1:40:99:0,105,1635	0/1:49,13:52:99:449,0,266	0/1:17,13:29:99:119,0,137	0/1:24,5:22:99:187,0,153	1/1:3,3:6:1.09:3,1,0	0/0:25,1:24:63.21:0,63,999	0/0:15,0:15:42.14:0,42,659	0/0:23,0:24:62.31:0,62,928	0/0:26,0:23:57.05:0,57,872	1/1:5,7:11:5.78:143,6,0	0/0:39,1:40:73.83:0,74,1627	0/1:6,1:8:12.19:46,0,12	0/0:24,1:24:21.20:0,21,869	0/0:17,0:15:19.69:0,20,316	0/0:103,1:98:99:0,246,3792	0/0:12,0:12:17.95:0,18,285	0/0:15,0:14:21.07:0,21,331	0/0:50,1:50:99:0,130,1927	0/0:12,0:12:21:0,21,331	0/0:37,2:34:10.19:0,10,1238	0/0:22,0:20:50.16:0,50,751	0/1:8,1:9:18.85:19,0,355
chr10	66100426	.	TCACA	T	1425.51	PASS	AB=0.801;AC=9;AF=0.161;AN=56;BaseQRankSum=11.263;DP=879;FS=13.770;HRun=0;HaplotypeScore=212.9448;InbreedingCoeff=0.4127;MQ=46.49;MQ0=58;MQRankSum=-10.851;QD=9.76;ReadPosRankSum=-2.561;VQSLOD=1.4691;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:45:99:0,99,2326	0/0:7,0:5:9.03:0,9,214	0/0:68,0:12:27.05:0,27,515	0/0:87,0:7:18.06:0,18,341	0/0:22,0:22:22.99:0,23,605	0/0:25,0:25:72.22:0,72,1678	0/0:39,0:39:93.22:0,93,2051	0/1:43,16:53:57.65:921,0,58	0/1:27,2:29:31.28:149,0,31	1/1:17,7:22:8.07:353,8,0	1/1:5,1:6:0.47:1,0,0	0/0:27,0:25:54.18:0,54,1311	0/0:15,0:15:39.13:0,39,931	0/0:23,0:24:41.91:0,42,945	0/0:26,0:23:48:0,48,1068	1/1:11,1:11:3.59:100,4,0	0/0:40,0:40:93.08:0,93,2164	0/1:4,0:8:28.39:28,0,36	0/0:25,0:24:52.55:0,53,1033	0/0:17,0:15:20.98:0,21,454	0/0:100,0:98:99:0,201,4446	0/0:13,0:13:18.01:0,18,403	0/0:16,0:15:23.76:0,24,528	0/0:48,0:48:99:0,117,2700	0/0:12,0:12:18.04:0,18,450	0/0:37,1:34:25.39:0,25,1467	0/0:20,0:18:45.05:0,45,1069	0/0:10,0:10:26.30:0,26,578
chr10	66100430	.	A	AT	251.03	PASS	AB=0.929;AC=5;AF=0.089;AN=56;BaseQRankSum=8.251;DP=904;FS=8.305;HRun=0;HaplotypeScore=194.2820;InbreedingCoeff=0.1205;MQ=46.54;MQ0=54;MQRankSum=-7.969;QD=2.24;ReadPosRankSum=-2.468;VQSLOD=1.7467;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:49:99:0,121,1627	0/0:6,0:5:9.03:0,9,126	0/0:66,0:12:36.08:0,36,454	0/0:92,0:8:20.98:0,21,256	0/0:23,0:23:27.39:0,27,379	0/0:26,0:26:72.24:0,72,1005	0/0:43,0:42:99:0,111,1522	0/1:68,4:63:99:245,0,528	0/0:32,0:31:34.47:0,34,273	0/1:26,0:22:93.04:93,0,274	1/1:6,0:6:0.61:2,1,0	0/0:30,0:28:69.22:0,69,941	0/0:15,0:15:42.12:0,42,569	0/0:23,0:23:60.01:0,60,790	0/0:22,0:20:57.18:0,57,775	0/0:13,0:12:7.33:0,7,54	0/0:40,0:40:99:0,110,1484	0/1:6,0:7:7.41:7,0,55	0/0:27,0:24:68.16:0,68,882	0/0:16,0:14:20.96:0,21,294	0/0:102,0:97:99:0,231,3134	0/0:14,0:14:24.08:0,24,333	0/0:16,0:14:24.08:0,24,336	0/0:50,0:49:99:0,126,1729	0/0:13,0:13:24.08:0,24,333	0/0:39,0:35:98.02:0,98,1251	0/0:23,0:21:54.11:0,54,726	0/0:9,0:9:27.09:0,27,375
chr10	66100439	.	CACAAA	C	377.58	PASS	AB=0.943;AC=6;AF=0.107;AN=56;BaseQRankSum=8.178;DP=883;FS=3.667;HRun=0;HaplotypeScore=232.1667;InbreedingCoeff=0.2498;MQ=47.41;MQ0=47;MQRankSum=-6.689;QD=2.68;ReadPosRankSum=-1.619;VQSLOD=2.5374;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:50:99:0,137,3796	0/0:4,0:3:9.03:0,9,294	0/0:77,0:16:42.51:0,43,914	0/0:93,0:11:24.04:0,24,622	0/0:24,0:24:45.56:0,46,1119	0/0:26,0:26:75.26:0,75,2231	0/0:42,0:42:99:0,120,3261	0/1:68,0:60:57.62:58,0,694	0/1:22,6:27:52.91:264,0,53	0/1:25,0:22:79.15:79,0,146	0/0:6,0:6:0.19:0,0,0	0/0:26,0:25:69.24:0,69,2009	0/0:14,0:14:42.14:0,42,1314	0/0:17,0:17:47.87:0,48,1291	0/0:21,0:19:53.92:0,54,1661	1/1:10,0:11:7.30:89,7,0	0/0:38,0:38:99:0,105,3182	0/1:7,0:7:8.68:9,0,97	0/0:28,0:22:63.14:0,63,1729	0/0:18,0:16:33.07:0,33,737	0/0:97,0:94:99:0,240,6726	0/0:12,0:12:27.56:0,28,764	0/0:15,0:13:35.07:0,35,846	0/0:53,0:53:99:0,147,4083	0/0:15,0:15:41.93:0,42,865	0/0:35,0:33:95.98:0,96,2550	0/0:20,0:20:57.20:0,57,1651	0/0:9,0:9:27.08:0,27,818
chr10	66100447	.	C	CGAG	998.70	PASS	AB=0.888;AC=5;AF=0.089;AN=56;BaseQRankSum=9.195;DP=846;FS=1.366;HRun=0;HaplotypeScore=197.0753;InbreedingCoeff=0.2120;MQ=47.64;MQ0=42;MQRankSum=-8.761;QD=8.54;ReadPosRankSum=-1.311;VQSLOD=3.2737;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,126,2289	0/0:3,0:3:9.03:0,9,167	0/0:81,0:19:50.54:0,51,682	0/0:93,0:15:25.32:0,25,441	0/0:24,0:24:49.35:0,49,854	0/0:22,0:22:66.18:0,66,1183	0/0:44,0:44:99:0,117,2147	0/1:53,3:52:99:503,0,655	1/1:22,4:28:0.84:356,1,0	0/1:18,0:18:99:168,0,141	0/0:4,1:6:1.36:0,1,2	0/0:23,0:24:66.19:0,66,1184	0/0:13,0:13:39.13:0,39,722	0/0:16,0:16:45.03:0,45,763	0/0:18,0:16:48.14:0,48,827	0/1:8,2:10:38.18:82,0,38	0/0:39,0:39:99:0,114,2075	0/0:7,0:8:16.56:0,17,196	0/0:29,0:24:66.14:0,66,1166	0/0:15,0:15:27.02:0,27,466	0/0:86,0:85:99:0,220,3952	0/0:11,0:11:27.56:0,28,501	0/0:14,0:12:27.09:0,27,492	0/0:46,0:48:99:0,135,2487	0/0:15,0:15:36.53:0,37,633	0/0:37,0:36:99:0,99,1741	0/0:21,0:21:57.09:0,57,953	0/0:9,0:9:26.27:0,26,419
chr10	66100642	.	T	TATA	3091.43	PASS	AB=0.857;AC=13;AF=0.241;AN=54;BaseQRankSum=-4.434;DP=269;FS=21.001;HRun=0;HaplotypeScore=39.2937;InbreedingCoeff=0.6412;MQ=72.71;MQ0=0;MQRankSum=-0.813;QD=32.89;ReadPosRankSum=-2.126;VQSLOD=1.2865;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:51.17:0,51,755	0/0:4,0:4:9.03:0,9,131	0/0:2,0:2:5.97:0,6,45	0/0:11,0:8:3.17:0,3,28	0/0:8,0:8:15.05:0,15,223	0/0:9,0:8:18.06:0,18,266	0/0:5,0:5:12.04:0,12,176	1/1:9,24:37:84.23:1497,84,0	1/1:1,1:2:3.01:62,3,0	1/1:2,6:8:18.06:375,18,0	1/1:3,5:8:6.02:98,6,0	0/0:3,0:3:6.02:0,6,89	0/0:1,0:1:3.01:0,3,44	0/0:3,0:3:6.02:0,6,89	0/0:7,0:7:15.05:0,15,221	1/1:0,2:2:6.02:125,6,0	0/0:19,0:19:42.14:0,42,623	1/1:6,18:25:48.16:1000,48,0	0/0:15,0:15:36.12:0,36,533	0/0:16,0:16:42.14:0,42,622	0/0:6,0:6:12.04:0,12,178	0/0:1,0:1:3.01:0,3,45	0/0:4,0:4:9.03:0,9,134	./.	0/0:17,0:17:42.14:0,42,606	0/1:10,2:12:99:101,0,243	0/0:13,0:13:30.09:0,30,425	0/0:8,0:8:21.07:0,21,302
chr10	66100997	.	G	GTAATAA	1231.83	PASS	AB=1.000;AC=9;AF=0.167;AN=54;BaseQRankSum=3.256;DP=315;FS=0.683;HRun=0;HaplotypeScore=73.5909;InbreedingCoeff=0.7738;MQ=62.58;MQ0=0;MQRankSum=-2.039;QD=17.35;ReadPosRankSum=-4.280;VQSLOD=1.3050;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:45.13:0,45,910	./.	0/0:6,0:6:9.50:0,10,189	0/1:4,0:4:0.82:1,0,40	0/0:9,0:9:27.07:0,27,500	0/0:17,0:17:36.12:0,36,752	0/0:4,0:4:9.03:0,9,194	1/1:25,16:42:51.05:1090,51,0	0/0:8,0:8:21.05:0,21,410	1/1:1,0:7:14.32:84,14,0	1/1:3,0:10:17.77:116,18,0	0/0:7,0:7:12.02:0,12,209	0/0:7,0:7:18.06:0,18,375	0/0:9,0:9:24.07:0,24,474	0/0:6,0:6:12.01:0,12,214	1/1:0,0:7:14.78:94,15,0	0/0:25,0:25:57.15:0,57,1110	0/0:22,0:22:54.16:0,54,1116	0/0:21,0:21:57.15:0,57,1067	0/0:7,0:7:21.04:0,21,360	0/0:5,0:5:9.03:0,9,194	0/0:1,0:1:3.01:0,3,65	0/0:4,0:4:9:0,9,100	0/0:2,0:2:5.98:0,6,85	0/0:6,0:6:15.05:0,15,321	0/0:17,0:17:45.15:0,45,964	0/0:26,0:26:72.17:0,72,1355	0/0:16,0:16:28.66:0,29,846
chr10	66101316	.	TC	T	942.94	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.833;DP=649;FS=0.732;HRun=2;HaplotypeScore=77.5929;InbreedingCoeff=0.9861;MQ=90.12;MQ0=0;MQRankSum=-1.006;QD=34.92;ReadPosRankSum=-3.477;VQSLOD=2.6057;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,138,2039	0/0:6,0:6:18.06:0,18,270	0/0:36,0:36:99:0,102,1486	0/0:15,0:15:42.14:0,42,629	0/0:30,0:30:84.27:0,84,1240	0/0:18,0:18:54.18:0,54,808	0/0:22,0:22:66.22:0,66,989	1/1:0,27:27:81.25:1038,81,0	0/0:22,0:22:66.22:0,66,988	0/0:19,0:19:57.19:0,57,854	0/0:17,0:17:51.17:0,51,764	0/0:17,0:17:51.16:0,51,747	0/0:27,0:27:78.25:0,78,1146	0/0:17,0:17:51.17:0,51,762	0/0:34,0:34:99:0,99,1483	0/0:23,0:23:60.20:0,60,899	0/0:36,0:36:99:0,105,1574	0/0:30,0:30:84.27:0,84,1225	0/0:23,0:23:69.21:0,69,996	0/0:9,0:9:24.08:0,24,351	0/0:35,0:35:99:0,105,1574	0/0:7,0:7:21.07:0,21,315	0/0:19,0:19:57.19:0,57,853	0/0:23,0:23:69.23:0,69,1034	0/0:28,0:28:84.28:0,84,1258	0/0:26,0:26:75.24:0,75,1102	0/0:22,0:22:66.22:0,66,984	0/0:14,0:14:42.11:0,42,588
chr10	66101911	.	C	CCGGTCTTT	15014.83	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=0.907;DP=716;FS=14.611;HRun=0;HaplotypeScore=179.9435;InbreedingCoeff=0.9965;MQ=87.72;MQ0=1;MQRankSum=-14.908;QD=97.50;ReadPosRankSum=-4.734;VQSLOD=3.4263;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:57:99:0,169,4303	0/0:9,0:9:27.09:0,27,705	0/0:28,0:28:66.13:0,66,1541	0/0:29,0:29:72.19:0,72,1745	0/0:17,0:17:42.14:0,42,1107	0/0:22,0:22:57.18:0,57,1475	0/0:28,0:28:75.24:0,75,1938	1/1:18,13:35:96.27:3290,96,0	1/1:13,12:27:75.21:2983,75,0	1/1:16,16:37:99:3773,103,0	1/1:7,9:17:47.94:1165,48,0	0/0:18,0:18:48.16:0,48,1220	0/0:31,0:31:84.27:0,84,2239	0/0:26,0:26:69.24:0,69,1895	0/0:17,0:17:36.12:0,36,972	1/1:4,13:18:48.14:1937,48,0	0/0:33,0:33:93.32:0,93,2544	1/1:9,10:19:45.15:1867,45,0	0/0:22,0:22:57.18:0,57,1425	0/0:16,0:16:48.16:0,48,1259	0/0:55,0:55:99:0,159,4087	0/0:19,0:19:51.15:0,51,1294	0/0:18,0:18:48.15:0,48,1198	0/0:40,0:40:99:0,114,2958	0/0:19,0:19:51.13:0,51,1167	0/0:23,0:23:60.19:0,60,1563	0/0:27,0:27:75.15:0,75,1921	0/0:8,0:8:15.05:0,15,411
chr10	66102585	.	C	CCACACAT	1135.26	PASS	AB=0.973;AC=14;AF=0.250;AN=56;BaseQRankSum=9.637;DP=728;FS=58.697;HRun=0;HaplotypeScore=453.0719;InbreedingCoeff=-0.1584;MQ=34.69;MQ0=22;MQRankSum=-2.014;QD=4.43;ReadPosRankSum=1.474;VQSLOD=-0.5031;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:42:70.47:0,70,1384	0/1:13,0:13:34.61:150,0,35	0/0:50,0:6:12.04:0,12,302	0/0:41,0:6:9.02:0,9,227	0/0:40,2:40:5.03:0,5,775	0/1:8,2:9:0.96:1,0,49	0/1:15,0:14:2.87:3,0,191	0/0:56,0:48:92.04:0,92,3001	0/0:39,0:39:44.38:0,44,1268	0/1:51,1:46:99:251,0,1749	0/0:12,0:12:9.90:0,10,201	0/1:13,1:14:65.74:111,0,66	0/0:41,0:40:35.05:0,35,1451	0/1:20,1:16:5.95:6,0,63	0/0:19,0:15:25.89:0,26,143	0/0:27,1:28:20.04:0,20,910	0/1:5,0:5:7.24:7,0,250	0/0:7,0:7:15.05:0,15,412	0/0:21,0:19:48.16:0,48,1085	0/1:25,0:28:99:168,0,128	0/0:26,0:23:3.94:0,4,196	0/1:22,0:22:39.38:39,0,41	0/1:33,1:34:99:148,0,436	0/0:30,0:30:36.36:0,36,814	1/1:13,0:14:8.05:217,8,0	0/1:21,0:18:99:130,0,427	0/0:12,0:10:6.15:0,6,72	0/1:7,0:7:29.70:50,0,30
chr10	66102597	.	AT	A	2580.61	PASS	AB=0.834;AC=25;AF=0.446;AN=56;BaseQRankSum=9.910;DP=819;FS=149.079;HRun=1;HaplotypeScore=432.6172;InbreedingCoeff=-0.7805;MQ=36.20;MQ0=36;MQRankSum=-5.042;QD=3.62;ReadPosRankSum=2.852;VQSLOD=0.1820;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:47,6:49:16.79:17,0,984	0/1:13,1:14:17.51:18,0,41	0/0:62,1:5:12.04:0,12,185	0/1:51,1:8:26.80:27,0,173	0/1:34,9:42:35.17:35,0,643	0/1:8,5:12:29.15:138,0,29	0/1:4,7:12:59.60:240,0,60	0/1:41,11:44:99:255,0,1319	0/1:41,2:43:7.79:8,0,953	0/1:45,8:46:99:253,0,1140	0/1:12,0:12:3.84:4,0,318	0/1:12,5:17:97.23:129,0,97	0/1:37,7:42:99:124,0,1014	0/1:12,9:16:96.70:103,0,97	0/1:6,14:16:25.18:229,0,25	0/1:27,5:32:99:130,0,622	0/1:4,1:5:23.18:23,0,84	0/0:8,0:8:21:0,21,281	0/1:16,3:14:28.40:28,0,484	0/1:32,4:36:99:162,0,207	0/1:22,3:21:70.90:71,0,81	0/1:24,4:28:44.75:143,0,45	0/1:32,9:40:99:197,0,410	0/0:33,3:36:41.03:0,41,689	0/1:28,0:28:21.37:21,0,63	0/1:20,8:25:99:198,0,265	0/1:6,7:10:19.29:127,0,19	0/1:6,2:8:24.92:54,0,25
chr10	66102598	.	T	TC	2447.85	PASS	AB=0.977;AC=23;AF=0.411;AN=56;BaseQRankSum=10.889;DP=831;FS=134.214;HRun=0;HaplotypeScore=448.1076;InbreedingCoeff=-0.5278;MQ=36.08;MQ0=39;MQRankSum=-4.837;QD=3.99;ReadPosRankSum=2.968;VQSLOD=0.5329;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:53,0:49:19.02:19,0,846	0/1:11,3:14:23.30:54,0,23	0/0:63,0:5:12:0,12,146	0/1:52,0:9:4.80:5,0,151	0/1:43,0:42:58.29:58,0,544	0/1:14,0:13:16.81:143,0,17	0/1:11,0:12:52.44:217,0,52	0/0:52,0:44:16.71:0,17,1145	0/0:43,0:43:7.34:0,7,829	0/1:50,1:45:99:209,0,924	0/0:14,0:14:6.24:0,6,270	0/1:17,0:17:67.44:123,0,67	0/1:44,0:42:24.35:24,0,911	0/1:21,0:16:53.02:94,0,53	0/1:20,0:17:0.55:260,0,1	0/1:33,0:33:99:141,0,553	0/1:5,0:5:29.28:29,0,78	0/0:8,0:8:18.06:0,18,243	0/1:19,0:14:17.28:17,0,402	0/1:34,1:39:99:213,0,162	0/1:25,0:21:46.02:46,0,70	0/1:27,1:28:21.43:150,0,21	0/1:41,0:40:99:245,0,365	0/0:36,0:36:44.51:0,45,613	0/1:23,2:29:51.69:75,0,52	0/1:28,1:27:99:227,0,226	1/1:13,0:10:4.59:182,5,0	0/1:8,0:8:10.41:74,0,10
chr10	66102603	.	A	AC	95.68	PASS	AB=0.859;AC=9;AF=0.161;AN=56;BaseQRankSum=6.720;DP=831;FS=92.658;HRun=1;HaplotypeScore=471.7285;InbreedingCoeff=-0.1721;MQ=36.29;MQ0=38;MQRankSum=-4.742;QD=0.50;ReadPosRankSum=2.373;VQSLOD=0.1500;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,1:47:34.55:0,35,823	0/0:11,1:13:6.98:0,7,75	0/0:64,0:5:12.03:0,12,152	0/0:54,0:10:15.51:0,16,196	0/0:37,3:44:22.17:0,22,543	0/1:12,2:13:34.07:34,0,39	0/1:15,1:17:58.71:59,0,105	0/0:46,0:36:93.61:0,94,1115	0/0:40,0:43:45.02:0,45,905	0/0:47,2:45:86.04:0,86,1187	0/0:12,0:13:20.91:0,21,306	0/0:10,4:17:11.90:0,12,129	0/0:40,1:44:18.22:0,18,908	0/1:7,6:16:13.06:13,0,26	0/1:10,7:17:43.29:47,0,43	0/1:30,1:32:16.59:17,0,556	0/0:5,0:5:2.86:0,3,82	0/0:8,0:8:16.61:0,17,216	0/0:12,1:10:14.51:0,15,301	0/0:33,4:39:23.20:0,23,307	0/1:21,0:20:15.79:16,0,22	0/0:26,4:31:17.62:0,18,158	0/1:33,5:39:10.39:10,0,470	0/0:32,2:35:44.65:0,45,631	0/0:29,0:30:10.60:0,11,139	0/0:21,5:26:4.54:0,5,316	0/1:5,6:10:6.77:27,0,7	0/1:9,2:11:8.21:8,0,36
chr10	66102605	.	AC	A	229.39	PASS	AB=0.939;AC=15;AF=0.268;AN=56;BaseQRankSum=8.876;DP=842;FS=112.817;HRun=2;HaplotypeScore=472.8812;InbreedingCoeff=-0.2549;MQ=36.38;MQ0=37;MQRankSum=-5.229;QD=0.66;ReadPosRankSum=3.983;VQSLOD=0.4583;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:47:3.38:0,3,810	0/0:9,4:13:1.97:0,2,28	0/0:67,1:5:9.03:0,9,115	0/0:51,1:10:15.52:0,16,215	0/0:45,2:46:10.66:0,11,554	0/0:12,2:13:5.23:0,5,49	0/1:17,0:17:23.23:23,0,31	0/0:42,3:36:7.16:0,7,927	0/1:40,5:45:67.16:67,0,1027	0/1:46,5:46:6.98:7,0,1153	0/1:13,0:13:7.79:8,0,287	0/1:16,1:17:13.48:13,0,28	0/1:47,0:45:19.19:19,0,1157	0/1:19,2:16:7.75:60,0,8	0/1:20,0:17:2.71:3,0,38	0/0:32,2:34:26.64:0,27,718	0/0:4,1:5:3.95:0,4,40	0/1:6,1:7:20.28:20,0,182	0/0:14,0:10:7.86:0,8,243	0/0:33,6:40:0.26:0,0,103	1/1:21,2:19:1.12:30,1,0	0/1:27,5:32:23.93:28,0,24	0/0:38,3:40:14.77:0,15,451	0/0:39,0:39:43.94:0,44,694	0/0:27,0:30:5.72:0,6,54	0/1:29,0:26:36.86:37,0,129	0/1:13,0:10:4.16:22,0,4	0/1:9,2:11:17.83:34,0,18
chr10	66102617	.	G	GCACA	4984.30	PASS	AB=0.936;AC=26;AF=0.464;AN=56;BaseQRankSum=4.436;DP=842;FS=28.400;HRun=0;HaplotypeScore=497.3306;InbreedingCoeff=0.0829;MQ=35.32;MQ0=37;MQRankSum=-5.219;QD=10.72;ReadPosRankSum=0.430;VQSLOD=2.3151;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:48:63.46:0,63,1223	0/0:13,0:13:1.30:0,1,30	0/0:65,0:10:27.04:0,27,389	0/0:59,0:11:9.03:0,9,152	0/0:42,0:42:16.34:0,16,729	0/1:15,0:14:1.82:11,0,2	0/1:18,0:18:5.90:18,0,6	1/1:10,3:7:3.01:75,3,0	0/1:10,0:44:31.27:287,0,31	1/1:39,20:56:62.65:1783,63,0	1/1:15,8:23:23.95:557,24,0	0/1:23,0:23:11.37:68,0,11	0/0:44,0:42:72.65:0,73,1452	1/1:30,0:24:14.76:80,15,0	0/1:15,0:14:13.09:22,0,13	1/1:11,20:34:63.01:1364,63,0	0/1:5,0:5:24.35:26,0,24	0/1:3,0:8:13.88:37,0,14	1/1:7,0:4:0.93:29,1,0	0/1:41,0:41:41.55:42,0,99	0/0:15,0:13:2.78:0,3,24	0/1:34,0:33:40.92:56,0,41	0/0:45,0:44:33.02:0,33,678	0/0:44,0:44:61.19:0,61,1023	0/1:32,0:32:24.13:33,0,24	0/1:35,0:31:75.83:271,0,76	1/1:14,0:12:14.56:148,15,0	0/1:13,0:13:8.38:79,0,8
chr10	66102620	.	C	CA	500	PASS	AB=0.911;AC=16;AF=0.286;AN=56;BaseQRankSum=10.153;DP=921;FS=79.873;HRun=1;HaplotypeScore=532.2637;InbreedingCoeff=-0.3956;MQ=35.19;MQ0=40;MQRankSum=-6.528;QD=1.14;ReadPosRankSum=2.237;VQSLOD=-0.2128;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:50:48.21:0,48,1004	0/0:13,1:14:4.64:0,5,43	0/0:71,0:15:36.68:0,37,425	0/0:67,0:13:21.30:0,21,280	0/0:41,2:44:48.68:0,49,627	0/1:14,1:15:4.37:4,0,27	0/1:19,0:19:34.56:65,0,35	0/1:21,0:14:24.81:25,0,199	0/0:47,0:46:11.56:0,12,130	0/1:61,1:58:90.80:91,0,640	0/1:25,0:25:26.33:31,0,26	0/1:20,1:24:37.34:37,0,42	0/0:47,0:45:99:0,103,1283	0/0:24,5:24:24.52:0,25,102	0/1:15,3:17:15.75:16,0,37	0/0:36,0:36:3.56:0,4,26	0/1:6,0:6:19.94:20,0,24	0/0:9,0:9:11.51:0,12,91	0/1:8,1:5:22.56:23,0,42	0/1:36,4:40:30.51:50,0,31	0/0:18,0:13:2.02:0,2,7	0/1:34,4:37:9.48:23,0,9	0/1:45,5:50:8.69:9,0,510	0/0:44,2:46:64.34:0,64,809	0/1:37,0:37:22.68:23,0,65	0/1:35,4:35:99:161,0,275	0/1:9,5:12:31.40:31,0,67	0/1:11,2:13:44.29:44,0,98
chr10	66102623	.	AC	A	2517.79	PASS	AB=0.974;AC=30;AF=0.536;AN=56;BaseQRankSum=11.864;DP=973;FS=100.472;HRun=1;HaplotypeScore=528.0812;InbreedingCoeff=-0.0044;MQ=35.96;MQ0=38;MQRankSum=-11.055;QD=3.38;ReadPosRankSum=-2.116;VQSLOD=0.2686;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:56,1:52:54.21:54,0,1142	0/0:14,0:14:11.03:0,11,62	0/1:72,3:18:72.17:72,0,553	0/0:68,3:12:25.04:0,25,360	0/1:46,0:45:95.89:96,0,658	0/1:15,1:15:2.75:25,0,3	0/1:21,0:21:3.77:124,0,4	0/1:22,5:19:99:159,0,308	0/0:49,1:49:3.68:0,4,832	0/1:67,1:62:91.12:91,0,1056	0/1:24,1:25:16.21:16,0,208	1/1:23,2:25:22.02:203,22,0	0/1:51,0:49:44.19:44,0,1472	1/1:29,2:24:9.68:200,10,0	0/1:21,1:18:2.31:133,0,2	0/0:37,1:38:2.76:0,3,570	1/1:5,1:6:7.93:73,8,0	0/0:10,0:10:20.23:0,20,258	1/1:8,0:5:9.87:49,10,0	0/1:40,0:40:7.51:79,0,8	1/1:23,0:18:14.45:99,14,0	1/1:39,0:38:23.99:114,24,0	0/1:51,0:50:59.06:59,0,584	0/0:46,0:46:58.99:0,59,992	0/1:37,0:37:26.98:78,0,27	1/1:41,2:38:15.11:535,15,0	1/1:17,1:14:31.41:245,31,0	0/1:13,0:13:8.84:143,0,9
chr10	66102624	.	C	CA	4778.43	PASS	AB=0.923;AC=39;AF=0.696;AN=56;BaseQRankSum=11.703;DP=998;FS=137.553;HRun=1;HaplotypeScore=534.1667;InbreedingCoeff=0.0341;MQ=36.01;MQ0=35;MQRankSum=-11.259;QD=5.49;ReadPosRankSum=-1.196;VQSLOD=1.0785;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:54,5:54:69.84:70,0,920	1/1:9,1:14:5.93:48,6,0	0/1:77,0:19:72.17:72,0,451	0/0:69,0:12:24.98:0,25,303	0/1:40,7:46:99:125,0,518	1/1:9,8:16:14.97:116,15,0	1/1:14,7:22:26.79:221,27,0	0/1:27,1:20:99:188,0,259	0/1:50,0:49:89.48:89,0,110	0/1:62,8:63:99:372,0,396	0/1:21,5:26:37.53:73,0,38	1/1:18,8:26:43.29:345,43,0	0/1:49,5:52:50.88:51,0,1186	1/1:18,14:25:20.01:255,20,0	1/1:19,5:20:21.24:199,21,0	0/1:39,1:40:56.95:57,0,80	1/1:4,2:6:4.79:90,5,0	0/0:10,0:10:14.27:0,14,160	1/1:8,0:6:14.97:154,15,0	1/1:28,6:40:18.21:194,18,0	1/1:16,10:21:9.96:92,10,0	1/1:25,4:38:33.59:188,34,0	0/1:38,7:51:99:113,0,444	0/0:45,1:46:62.32:0,62,818	0/1:26,5:38:11.06:116,0,11	1/1:34,8:39:82.44:939,82,0	1/1:12,5:14:34.36:345,34,0	1/1:6,3:13:14:267,14,0
chr10	66102712	.	GCACA	G	5004.55	PASS	AB=0.899;AC=37;AF=0.661;AN=56;BaseQRankSum=4.388;DP=979;FS=3.587;HRun=0;HaplotypeScore=295.3314;InbreedingCoeff=0.5512;MQ=43.24;MQ0=48;MQRankSum=-2.378;QD=7.94;ReadPosRankSum=0.686;VQSLOD=3.5286;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:59:73.30:0,73,1093	1/1:3,6:9:11.95:190,12,0	0/0:56,0:4:9.03:0,9,133	0/0:72,0:13:5.98:0,6,58	0/0:30,0:30:23.08:0,23,343	0/1:18,6:22:1.12:305,0,1	1/1:24,4:25:25.18:427,25,0	1/1:46,1:41:11.59:110,12,0	0/1:32,0:37:4.82:5,0,620	1/1:57,0:52:31.15:222,31,0	1/1:19,0:18:5.69:30,6,0	0/0:30,0:30:45.05:0,45,888	0/0:37,0:38:47.62:0,48,861	1/1:20,5:20:18.05:255,18,0	1/1:21,7:24:17.99:268,18,0	1/1:38,0:38:28.95:207,29,0	1/1:16,3:19:18.05:300,18,0	0/1:23,0:23:38.39:38,0,40	1/1:8,3:11:0.77:190,1,0	1/1:17,3:20:11.23:176,11,0	1/1:66,12:71:65.81:967,66,0	1/1:25,5:29:15.18:248,15,0	0/1:39,0:41:23.78:24,0,352	0/0:55,0:56:89.72:0,90,1692	0/1:21,3:25:36.13:105,0,36	1/1:31,3:32:10.48:344,10,0	1/1:12,4:14:12.03:167,12,0	1/1:7,11:18:27.09:427,27,0
chr10	66102736	.	ACACACACACACACATAC	A	2630.23	PASS	AB=1.000;AC=8;AF=0.143;AN=56;BaseQRankSum=5.296;DP=998;FS=32.421;HRun=0;HaplotypeScore=430.8101;InbreedingCoeff=0.6815;MQ=42.56;MQ0=53;MQRankSum=-3.006;QD=17.65;ReadPosRankSum=2.732;VQSLOD=0.6975;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:53:99:0,136,5113	0/0:9,0:9:21.07:0,21,788	0/0:63,0:6:18.01:0,18,357	0/0:73,0:6:15.05:0,15,287	0/0:32,0:30:31.46:0,31,1291	0/0:19,0:19:50.85:0,51,1051	0/0:35,0:34:74.58:0,75,1446	0/1:40,0:31:79.60:80,0,380	0/0:39,0:37:97.45:0,97,3745	1/1:33,3:27:41.67:1170,42,0	1/1:13,1:12:8.89:168,9,0	0/0:37,0:36:78.18:0,78,3354	0/0:35,0:33:93.32:0,93,4434	0/0:32,0:27:43.67:0,44,1068	0/0:26,0:25:42.56:0,43,774	1/1:25,9:29:38.70:1199,39,0	0/0:23,0:23:47.20:0,47,1097	0/1:25,0:24:99:163,0,185	0/0:14,0:13:30.01:0,30,471	0/0:26,0:26:35.21:0,35,722	0/0:90,0:84:99:0,159,5285	0/0:28,0:29:38.39:0,38,905	0/0:41,0:40:60.94:0,61,1829	0/0:60,0:59:99:0,139,6512	0/0:31,0:32:39.54:0,40,1091	0/0:43,0:39:52.73:0,53,2082	0/0:16,0:14:38.90:0,39,1184	0/0:19,0:17:38.42:0,38,1198
chr10	66102750	.	ATAC	A	1170.82	PASS	AB=0.904;AC=6;AF=0.107;AN=56;BaseQRankSum=3.550;DP=905;FS=22.758;HRun=0;HaplotypeScore=210.7273;InbreedingCoeff=-0.1086;MQ=43.72;MQ0=54;MQRankSum=-1.138;QD=7.32;ReadPosRankSum=0.028;VQSLOD=1.5582;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:49:99:0,110,2099	0/0:12,0:12:28.44:0,28,295	0/0:60,0:11:33.06:0,33,647	0/0:61,0:14:42.14:0,42,872	0/0:28,0:26:23.93:0,24,467	0/0:14,0:14:5.78:0,6,168	0/0:36,0:36:71.56:0,72,1071	0/1:27,0:19:14.31:160,0,14	0/0:41,0:39:99:0,107,1862	0/1:31,0:17:95.86:392,0,96	0/1:8,1:6:21.79:48,0,22	0/0:38,0:37:75.01:0,75,1391	0/0:35,0:33:93.30:0,93,1852	0/0:32,0:27:51.39:0,51,766	0/0:21,0:20:35.79:0,36,357	0/1:35,6:30:99:530,0,154	0/0:22,0:22:42.06:0,42,865	0/1:13,15:25:99:152,0,110	0/0:18,0:17:30.88:0,31,405	0/1:24,0:24:10.47:10,0,459	0/0:78,0:73:99:0,140,2399	0/0:20,0:19:25.10:0,25,346	0/0:37,0:36:51.25:0,51,901	0/0:52,0:52:99:0,115,2624	0/0:24,0:23:45.60:0,46,375	0/0:33,0:27:53.96:0,54,1088	0/0:17,0:15:43.35:0,43,645	0/0:15,0:13:31.94:0,32,267
chr10	66102752	.	AC	A	572.92	PASS	AB=0.774;AC=5;AF=0.089;AN=56;BaseQRankSum=4.571;DP=899;FS=6.296;HRun=2;HaplotypeScore=191.1631;InbreedingCoeff=-0.0982;MQ=43.96;MQ0=52;MQRankSum=-1.679;QD=4.12;ReadPosRankSum=0.679;VQSLOD=0.2680;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:45:99:0,118,1589	0/0:12,0:12:29.97:0,30,317	0/0:58,1:12:36.12:0,36,516	0/0:61,1:16:48.16:0,48,666	0/0:26,0:24:23.90:0,24,357	0/0:15,0:15:22.76:0,23,288	0/0:37,0:37:89.86:0,90,1029	0/1:21,6:20:88.67:89,0,205	0/0:40,0:38:99:0,106,1450	0/1:18,16:20:99:190,0,189	0/1:5,4:6:24.07:24,0,38	0/0:34,0:33:78.13:0,78,1082	0/0:34,0:32:96.31:0,96,1385	0/0:34,0:29:59.33:0,59,675	0/0:20,0:19:38.14:0,38,374	0/1:31,10:30:99:259,0,148	0/0:22,0:22:61.49:0,61,781	0/1:24,4:25:99:128,0,180	0/0:17,0:16:44.98:0,45,544	0/0:24,0:24:34.57:0,35,410	0/0:76,0:71:99:0,162,2101	0/0:21,0:20:32.87:0,33,338	0/0:36,0:35:56.14:0,56,712	0/0:53,0:53:99:0,138,1955	0/0:25,0:24:50.68:0,51,445	0/0:34,0:28:75.14:0,75,980	0/0:17,0:15:45.03:0,45,569	0/0:15,0:13:33.05:0,33,356
chr10	66103396	.	GGAGTAA	G	1843.04	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.126;DP=714;FS=7.618;HRun=0;HaplotypeScore=156.6133;InbreedingCoeff=0.9996;MQ=73.98;MQ0=0;MQRankSum=-7.896;QD=65.82;ReadPosRankSum=1.739;VQSLOD=4.2077;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,102,3466	0/0:14,0:14:42.14:0,42,1504	0/0:13,0:13:33.11:0,33,1125	0/0:12,0:12:36.12:0,36,1139	0/0:33,0:33:96.31:0,96,3283	0/0:21,0:21:63.22:0,63,2136	0/0:27,0:27:81.28:0,81,2920	0/0:34,0:34:87.30:0,87,2905	1/1:3,25:28:81.28:1938,81,0	0/0:34,0:34:99:0,99,3502	0/0:18,0:18:51.18:0,51,1824	0/0:19,0:19:51.17:0,51,1730	0/0:22,0:22:60.21:0,60,2162	0/0:24,0:24:69.24:0,69,2472	0/0:28,0:28:81.28:0,81,2901	0/0:19,0:19:54.19:0,54,1936	0/0:25,0:25:69.24:0,69,2394	0/0:29,0:28:75.23:0,75,2018	0/0:21,0:21:63.16:0,63,2080	0/0:35,0:35:99:0,102,3451	0/0:30,0:30:87.28:0,87,2905	0/0:28,0:28:81.26:0,81,2735	0/0:29,0:29:81.28:0,81,2864	0/0:29,0:29:87.30:0,87,2959	0/0:32,0:32:96.33:0,96,3288	0/0:27,0:27:81.28:0,81,2831	0/0:33,0:33:99:0,99,3370	0/0:15,0:15:45.15:0,45,1516
chr10	66103422	.	G	GA	5503.72	PASS	AB=0.929;AC=13;AF=0.232;AN=56;BaseQRankSum=-4.036;DP=717;FS=8.482;HRun=7;HaplotypeScore=77.9964;InbreedingCoeff=0.9127;MQ=72.39;MQ0=0;MQRankSum=-1.248;QD=27.52;ReadPosRankSum=-2.456;VQSLOD=4.2950;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:87.13:0,87,840	0/0:21,0:21:60.10:0,60,579	0/0:14,0:14:12.52:0,13,243	0/0:10,0:10:27.04:0,27,261	0/0:38,0:38:99:0,105,1014	0/0:22,0:22:63.10:0,63,608	0/0:27,0:27:72.09:0,72,689	1/1:2,29:31:61.64:996,62,0	1/1:4,28:32:81.25:978,81,0	1/1:4,29:33:87.24:1027,87,0	1/1:3,21:24:60.18:725,60,0	0/0:19,0:19:57.08:0,57,545	0/0:27,0:27:75.11:0,75,719	0/0:24,0:24:66.09:0,66,631	0/0:23,0:23:54.08:0,54,522	1/1:2,21:23:63.19:757,63,0	0/0:23,0:23:54.08:0,54,522	1/1:3,28:31:84.26:1015,84,0	0/0:23,0:23:57.09:0,57,551	0/0:27,0:27:75.12:0,75,724	0/0:28,0:28:81.08:0,81,773	0/0:27,0:27:72.11:0,72,695	0/0:29,0:29:81.13:0,81,782	0/0:29,0:29:78.12:0,78,753	0/0:34,0:34:93.14:0,93,893	0/1:24,2:26:6.24:6,0,513	0/0:31,0:31:87.12:0,87,834	0/0:9,0:9:27.04:0,27,261
chr10	66104456	.	A	AC	4146.86	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-10.157;DP=800;FS=2.167;HRun=6;HaplotypeScore=89.2169;InbreedingCoeff=0.9959;MQ=94.79;MQ0=0;MQRankSum=-5.640;QD=29.41;ReadPosRankSum=-0.077;VQSLOD=3.8975;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:61,0:61:99:0,126,1266	0/0:20,0:20:54.09:0,54,541	0/0:45,0:44:89.65:0,90,929	0/0:38,0:37:86.36:0,86,847	0/0:15,0:15:36.08:0,36,367	0/0:22,0:22:54.11:0,54,550	0/0:32,0:32:84.15:0,84,837	1/1:2,18:20:51.10:598,51,0	1/1:4,20:24:66.18:803,66,0	1/1:5,27:32:78.23:956,78,0	1/1:4,17:21:35.95:431,36,0	0/0:37,0:37:96.20:0,96,972	0/0:32,0:32:93.19:0,93,940	0/0:23,0:23:66.13:0,66,666	0/0:29,0:29:87.20:0,87,887	1/1:1,19:20:48.15:604,48,0	0/0:45,0:45:99:0,123,1254	1/1:4,20:24:60.19:755,60,0	0/0:16,0:16:48.07:0,48,473	0/0:20,0:20:51.06:0,51,501	0/0:59,0:59:99:0,159,1584	0/0:22,0:22:57.12:0,57,580	0/0:8,0:8:24.05:0,24,245	0/0:48,0:48:99:0,128,1302	0/0:24,0:24:60.13:0,60,612	0/0:34,2:36:23.72:0,24,862	0/0:22,0:21:63.14:0,63,642	0/0:5,0:5:15.03:0,15,153
chr10	66104512	.	CA	C	1071.68	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.491;DP=724;FS=4.583;HRun=2;HaplotypeScore=75.7872;InbreedingCoeff=0.9964;MQ=91.34;MQ0=0;MQRankSum=-1.136;QD=34.57;ReadPosRankSum=1.388;VQSLOD=4.0791;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:56:99:0,169,2494	0/0:16,0:16:48.16:0,48,719	0/0:29,0:29:87.23:0,87,1235	0/0:30,0:30:87.07:0,87,1119	0/0:16,0:16:45.14:0,45,654	0/0:22,0:22:66.21:0,66,968	0/0:27,0:27:81.26:0,81,1195	0/0:27,0:27:81.26:0,81,1180	1/1:0,31:31:90.29:1167,90,0	0/0:25,0:25:75.25:0,75,1124	0/0:23,0:23:66.19:0,66,942	0/0:32,0:32:96.33:0,96,1437	0/0:20,0:20:60.19:0,60,878	0/0:18,0:18:51.16:0,51,739	0/0:32,0:32:93.30:0,93,1372	0/0:20,0:20:57.19:0,57,853	0/0:42,0:42:99:0,126,1829	0/0:21,0:21:60.20:0,60,897	0/0:16,0:16:48.14:0,48,697	0/0:22,0:22:63.68:0,64,925	0/0:65,0:65:99:0,190,2801	0/0:11,0:11:30.10:0,30,447	0/0:9,0:9:27.08:0,27,384	0/0:35,0:35:99:0,105,1574	0/0:21,0:21:63.17:0,63,918	0/0:30,0:30:84.28:0,84,1241	0/0:19,0:19:54.18:0,54,808	0/0:9,0:9:24.08:0,24,350
chr10	66104713	.	T	TTAATTAAC	285.40	PASS	AC=4;AF=0.074;AN=54;BaseQRankSum=-0.178;DP=484;FS=2.464;HRun=0;HaplotypeScore=112.6757;InbreedingCoeff=0.6035;MQ=65.39;MQ0=0;MQRankSum=-3.417;QD=12.97;ReadPosRankSum=-2.036;VQSLOD=2.1192;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:96.31:0,96,2279	0/0:8,0:8:21.07:0,21,524	1/1:5,0:4:1.72:4,2,0	./.	0/0:27,0:27:27.09:0,27,648	0/0:16,0:16:42.13:0,42,909	0/0:8,0:8:12.02:0,12,201	0/0:27,0:27:9.02:0,9,114	0/0:17,0:17:18.04:0,18,394	0/0:21,0:21:27.08:0,27,552	0/0:10,0:10:21.05:0,21,418	0/0:11,0:11:12.03:0,12,219	0/0:11,0:11:15.05:0,15,365	0/0:15,0:15:27.08:0,27,619	0/0:16,0:16:21.06:0,21,462	0/0:13,0:13:15.05:0,15,362	0/0:32,0:32:33.10:0,33,769	1/1:6,6:17:9.03:368,9,0	0/0:20,0:20:9.03:0,9,222	0/0:22,0:22:30.09:0,30,690	0/0:13,0:13:5.99:0,6,69	0/0:15,0:15:9.02:0,9,175	0/0:11,0:11:12.04:0,12,300	0/0:9,0:9:6.02:0,6,147	0/0:27,0:27:48.16:0,48,1183	0/0:30,0:30:45.15:0,45,1087	0/0:17,0:16:21.06:0,21,457	0/0:9,0:9:9.03:0,9,222
chr10	66105211	.	T	TA	313.38	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-1.163;DP=653;FS=1.015;HRun=9;HaplotypeScore=67.4350;InbreedingCoeff=0.9917;MQ=69.35;MQ0=0;MQRankSum=2.928;QD=17.41;ReadPosRankSum=-4.739;VQSLOD=2.6030;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,117,1011	0/0:11,0:11:26.99:0,27,234	0/0:22,1:22:19.21:0,19,356	0/0:11,0:12:30.84:0,31,245	0/0:42,0:42:98.95:0,99,859	0/0:19,0:19:44.94:0,45,383	0/0:15,0:15:38.36:0,38,321	1/1:2,16:17:41.97:408,42,0	0/0:20,0:20:53.98:0,54,468	0/0:34,0:34:92.95:0,93,801	0/0:28,0:27:59.96:0,60,521	0/0:20,0:20:50.94:0,51,436	0/0:18,0:18:44.97:0,45,390	0/0:21,0:21:47.94:0,48,410	0/0:19,0:19:53.98:0,54,469	0/0:29,0:29:68.96:0,69,597	0/0:21,0:21:56.93:0,57,483	0/0:28,0:28:71.96:0,72,619	0/0:22,0:22:50.98:0,51,443	0/0:27,0:27:71.93:0,72,617	0/0:15,0:14:38.98:0,39,336	0/0:24,0:24:56.99:0,57,494	0/0:29,0:29:83.98:0,84,729	0/0:17,0:17:47.89:0,48,406	0/0:36,0:36:92.97:0,93,807	0/0:29,0:29:62.96:0,63,544	0/0:21,0:21:59.99:0,60,521	0/0:12,0:12:29.99:0,30,260
chr10	66106104	.	T	TA	659.94	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.915;DP=448;FS=16.924;HRun=9;HaplotypeScore=52.2310;InbreedingCoeff=0.9305;MQ=68.28;MQ0=1;MQRankSum=-2.913;QD=23.57;ReadPosRankSum=-4.315;VQSLOD=1.3676;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:77.98:0,78,676	0/0:6,0:6:18:0,18,156	0/0:13,0:13:15.75:0,16,150	0/0:17,0:18:12.80:0,13,201	0/0:8,0:8:17.99:0,18,155	0/0:10,0:10:23.24:0,23,206	0/0:17,0:17:35.98:0,36,313	1/1:5,23:28:69.18:755,69,0	0/0:8,0:8:23.99:0,24,207	0/0:7,0:7:21:0,21,182	0/0:10,0:10:29.98:0,30,257	0/0:19,0:19:33.44:0,33,287	0/0:10,0:10:26.99:0,27,234	0/0:12,0:12:26.98:0,27,233	0/0:12,0:12:29.99:0,30,260	0/0:7,0:7:20.98:0,21,178	0/0:22,0:21:50.97:0,51,441	0/0:31,0:32:85.04:0,85,710	0/0:14,0:14:32.98:0,33,287	0/0:32,0:32:80.96:0,81,700	0/0:17,0:17:44.99:0,45,390	0/0:14,0:14:29.99:0,30,260	0/0:13,0:13:35.99:0,36,312	0/0:20,0:20:53.99:0,54,468	0/0:15,0:16:26.49:0,26,276	0/0:18,0:18:47.98:0,48,417	0/0:23,0:23:65.96:0,66,569	0/0:13,0:12:29.99:0,30,260
chr10	66106221	.	AAAATAAATAAATAAATAAAT	A	517.97	PASS	AC=6;AF=0.125;AN=48;BaseQRankSum=-2.892;DP=362;FS=3.703;HRun=0;HaplotypeScore=270.6778;InbreedingCoeff=0.5690;MQ=38.79;MQ0=13;MQRankSum=1.313;QD=21.58;ReadPosRankSum=2.074;VQSLOD=2.3488;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:21.07:0,21,977	0/0:13,0:12:9.03:0,9,462	./.	./.	0/0:9,0:10:6.02:0,6,352	0/0:14,0:14:6.02:0,6,195	0/0:14,0:14:12.04:0,12,305	0/0:20,0:17:24.07:0,24,897	0/0:9,0:9:3.01:0,3,172	1/1:8,4:12:8.83:202,9,0	1/1:5,2:7:6.02:318,6,0	0/0:22,0:22:30.10:0,30,1657	0/0:6,0:6:3.01:0,3,279	0/0:16,0:16:21.07:0,21,1189	0/0:9,0:9:12.04:0,12,688	1/1:5,0:5:3.01:111,3,0	0/0:25,0:24:15.05:0,15,644	0/0:23,0:21:21.54:0,22,925	0/0:18,0:18:41.47:0,41,1758	0/0:20,0:18:30.10:0,30,1686	./.	./.	0/0:8,0:8:3.01:0,3,274	0/0:3,0:4:3.01:0,3,262	0/0:17,0:17:21.05:0,21,815	0/0:22,0:22:39.13:0,39,2062	0/0:18,0:18:24.08:0,24,1276	0/0:12,0:12:17.99:0,18,828
chr10	66106238	.	A	AG	307.20	PASS	AB=0.833;AC=14;AF=0.269;AN=52;BaseQRankSum=9.521;DP=321;FS=0.000;HRun=0;HaplotypeScore=175.3444;InbreedingCoeff=-0.0560;MQ=34.58;MQ0=16;MQRankSum=-4.546;QD=1.69;ReadPosRankSum=4.047;VQSLOD=2.3452;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:16:39.10:0,39,509	1/1:6,3:8:5.17:36,5,0	./.	./.	0/0:4,0:4:11.87:0,12,99	0/1:12,1:13:3.69:4,0,37	0/0:13,0:13:18.10:0,18,118	0/0:25,0:20:57.17:0,57,766	0/1:10,1:11:24.31:24,0,35	0/0:9,0:9:20.65:0,21,246	0/0:5,0:5:8.20:0,8,62	1/1:10,9:19:8.13:117,8,0	0/0:1,0:1:3.01:0,3,42	0/1:12,2:14:28.40:28,0,81	0/1:4,3:7:9.17:33,0,9	0/0:2,0:2:5.96:0,6,44	0/1:19,4:22:16.06:16,0,116	0/0:18,0:16:43.23:0,43,489	0/1:13,4:16:23.11:23,0,170	0/0:21,3:22:9.42:0,9,197	0/0:5,0:5:2.24:0,2,5	0/0:6,0:6:0:0,0,0	0/0:2,0:2:6.02:0,6,84	0/0:2,0:2:6.01:0,6,69	0/1:16,2:18:19.97:20,0,40	0/1:15,6:21:58.32:58,0,219	0/1:13,4:17:28.40:28,0,133	0/1:9,4:13:36.71:64,0,37
chr10	66106239	.	A	ATAGATAGATAG	9065.67	PASS	AB=0.888;AC=29;AF=0.558;AN=52;BaseQRankSum=8.973;DP=327;FS=4.292;HRun=0;HaplotypeScore=194.3506;InbreedingCoeff=0.4479;MQ=34.52;MQ0=15;MQRankSum=-6.715;QD=35.69;ReadPosRankSum=5.489;VQSLOD=4.0511;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:16:36.11:0,36,997	0/1:5,0:7:15.22:422,0,15	./.	./.	0/0:4,0:4:6.02:0,6,193	0/1:13,0:14:31.15:157,0,31	1/1:14,0:14:17.79:202,18,0	0/0:26,0:21:60.18:0,60,1471	1/1:9,0:10:2.37:168,2,0	0/0:9,0:9:21.07:0,21,583	0/0:5,0:5:9.03:0,9,253	1/1:10,9:19:30.09:1326,30,0	0/0:1,0:1:3.01:0,3,112	1/1:12,2:14:4.69:380,5,0	1/1:5,3:8:12.03:457,12,0	0/0:2,0:2:3.01:0,3,83	1/1:21,4:24:14.72:1010,15,0	0/1:19,0:17:33.02:154,0,33	1/1:13,4:16:41.51:947,42,0	1/1:22,3:23:37.43:552,37,0	1/1:5,0:5:1.57:4,2,0	0/1:7,0:7:0:0,0,0	0/0:2,0:2:6.02:0,6,178	0/0:2,0:2:6.02:0,6,147	1/1:16,2:18:20.92:579,21,0	0/1:15,6:21:28.84:1316,0,29	1/1:13,4:17:12.74:818,13,0	1/1:9,3:13:3.86:573,4,0
chr10	66106242	.	A	AG	296.04	PASS	AB=0.995;AC=14;AF=0.269;AN=52;BaseQRankSum=9.579;DP=324;FS=0.604;HRun=0;HaplotypeScore=178.0571;InbreedingCoeff=-0.0337;MQ=34.24;MQ0=13;MQRankSum=-4.727;QD=1.65;ReadPosRankSum=8.004;VQSLOD=1.8187;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:14:33.11:0,33,460	1/1:7,0:6:8.40:42,8,0	./.	./.	0/0:2,0:2:5.93:0,6,59	0/1:12,0:12:9.36:9,0,15	0/0:15,0:15:21.05:0,21,137	0/0:32,0:26:72.23:0,72,990	0/1:10,0:10:10.12:26,0,10	0/0:8,0:8:22.09:0,22,247	0/0:7,0:7:8:0,8,61	1/1:19,0:19:8.13:117,8,0	0/0:1,0:1:3.01:0,3,42	0/1:13,0:13:3.99:4,0,87	0/1:8,0:8:9.14:34,0,9	0/0:2,0:2:5.67:0,6,34	0/1:23,0:22:17.12:17,0,107	0/0:16,3:17:23.97:0,24,199	0/1:17,0:16:41.92:42,0,160	0/0:25,0:23:9.29:0,9,193	0/0:5,0:5:2.24:0,2,5	0/0:7,0:7:0:0,0,0	0/0:2,0:2:6.01:0,6,67	0/0:2,0:2:6.01:0,6,69	0/1:18,1:19:31.62:32,0,40	0/1:22,0:22:56.76:57,0,194	0/1:17,0:17:31.14:31,0,120	0/1:12,0:12:30.69:31,0,42
chr10	66106613	.	C	CTT	6191.45	PASS	AB=0.619;AC=35;AF=0.625;AN=56;BaseQRankSum=-2.605;DP=587;FS=0.000;HRun=12;HaplotypeScore=79.8112;InbreedingCoeff=0.4488;MQ=69.02;MQ0=2;MQRankSum=-0.383;QD=15.29;ReadPosRankSum=-2.084;VQSLOD=3.3573;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:36:84.50:0,85,743	1/1:0,4:6:11.52:129,12,0	0/0:30,0:17:28.70:0,29,203	0/0:23,0:17:11.21:0,11,101	0/0:18,0:19:38.90:0,39,407	1/1:4,10:15:1.81:317,2,0	1/1:4,20:26:38.51:611,39,0	1/1:3,2:25:21.65:210,22,0	1/1:8,3:27:27.53:297,28,0	0/1:17,1:35:99:113,0,132	0/1:4,0:11:6.96:50,0,7	1/1:1,13:15:30.10:418,30,0	0/0:22,0:24:50.66:0,51,456	1/1:4,10:17:21.86:232,22,0	0/1:6,15:24:40.34:408,0,40	0/1:9,0:19:40.44:40,0,54	0/1:5,16:23:2.39:553,0,2	1/1:4,8:15:22.54:236,23,0	1/1:2,10:17:43.54:472,44,0	1/1:9,10:19:26.90:308,27,0	1/1:8,10:20:4.82:360,5,0	1/1:6,11:19:10.77:382,11,0	0/0:12,0:10:27.01:0,27,250	0/0:33,0:36:86.26:0,86,752	0/1:7,0:17:28.10:28,0,28	1/1:5,13:18:38.54:473,39,0	1/1:6,10:17:2.50:265,3,0	0/1:5,9:15:0.69:289,0,1
chr10	66108213	.	C	CT	9847.37	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=6.547;DP=435;FS=17.612;HRun=3;HaplotypeScore=65.1662;InbreedingCoeff=0.9894;MQ=65.66;MQ0=4;MQRankSum=0.206;QD=33.72;ReadPosRankSum=1.893;VQSLOD=3.2659;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:96.27:0,96,1137	1/1:1,5:6:15.05:210,15,0	0/0:8,0:6:15.04:0,15,173	0/0:17,0:12:33.02:0,33,342	0/0:10,0:10:18.05:0,18,216	1/1:0,15:15:36.12:504,36,0	1/1:0,20:20:55.43:759,55,0	0/0:29,0:28:78.24:0,78,936	1/1:0,19:19:51.17:714,51,0	1/1:13,0:14:33.98:185,34,0	1/1:5,0:11:23.28:161,23,0	1/1:1,15:16:36.12:504,36,0	0/0:14,0:14:36.11:0,36,431	1/1:0,14:14:42.14:583,42,0	1/1:0,11:11:30.10:420,30,0	1/1:0,8:8:24.08:336,24,0	1/1:0,33:33:78.26:1092,78,0	1/1:3,18:20:48.13:652,48,0	1/1:3,12:14:36.10:473,36,0	1/1:0,7:7:21.07:294,21,0	1/1:2,17:19:39.13:546,39,0	1/1:0,7:7:21.07:294,21,0	0/0:6,0:6:18.04:0,18,197	0/0:20,0:20:57.13:0,57,668	1/1:0,12:12:33.08:461,33,0	1/1:1,17:18:51.17:714,51,0	1/1:2,14:16:42.10:566,42,0	1/1:0,9:9:27.09:378,27,0
chr10	66108216	.	T	TTTG	874.56	PASS	AB=0.658;AC=2;AF=0.036;AN=56;BaseQRankSum=5.485;DP=440;FS=3.547;HRun=0;HaplotypeScore=113.6795;InbreedingCoeff=-0.0427;MQ=65.25;MQ0=6;MQRankSum=-5.350;QD=34.98;ReadPosRankSum=-1.434;VQSLOD=3.6206;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:38:96.33:0,96,1745	0/0:7,0:6:13.15:0,13,49	0/0:8,0:6:15.05:0,15,246	0/0:17,0:12:33.09:0,33,532	0/0:8,0:8:18.06:0,18,329	0/0:16,0:16:27.41:0,27,90	0/0:21,0:20:35.82:0,36,103	0/0:29,0:28:84.21:0,84,1468	0/0:20,0:20:34.63:0,35,100	0/1:4,10:13:28.57:697,0,29	0/1:7,4:11:76.98:266,0,77	0/0:16,0:16:24.44:0,24,70	0/0:13,0:13:39.12:0,39,683	0/0:14,0:14:9.48:0,9,56	0/0:11,0:11:20.37:0,20,59	0/0:8,0:8:16.30:0,16,47	0/0:33,0:33:52.74:0,53,152	0/0:20,0:19:33.55:0,34,113	0/0:14,0:12:19.42:0,19,56	0/0:7,0:7:14.26:0,14,41	0/0:20,0:20:39.64:0,40,166	0/0:7,0:7:14.26:0,14,41	0/0:6,0:6:18.06:0,18,302	0/0:21,0:21:60.18:0,60,1056	0/0:12,0:12:22.19:0,22,64	0/0:20,0:20:43.60:0,44,170	0/0:17,0:17:18.48:0,18,125	0/0:10,0:10:18.33:0,18,53
chr10	66108240	.	TTA	T	215.74	PASS	AB=0.591;AC=1;AF=0.018;AN=56;BaseQRankSum=4.784;DP=403;FS=16.197;HRun=0;HaplotypeScore=87.5932;InbreedingCoeff=-0.0300;MQ=53.24;MQ0=14;MQRankSum=-4.584;QD=16.60;ReadPosRankSum=2.726;VQSLOD=2.6213;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:37:81.27:0,81,1584	0/0:5,0:4:9.03:0,9,183	0/0:5,0:2:6.02:0,6,121	0/0:12,0:4:9.03:0,9,183	0/0:10,0:10:18.06:0,18,365	0/0:18,0:18:39.12:0,39,756	0/0:14,0:13:31.53:0,32,551	0/0:23,0:17:51.18:0,51,1033	0/0:12,0:12:30.10:0,30,600	0/1:4,9:12:99:290,0,167	0/0:7,4:11:15.94:0,16,307	0/0:11,0:11:24.08:0,24,460	0/0:13,0:13:33.10:0,33,670	0/0:14,0:14:36.12:0,36,693	0/0:7,0:7:15.05:0,15,305	0/0:5,0:5:15.05:0,15,296	0/0:32,0:32:60.21:0,60,1190	0/0:24,0:21:41.90:0,42,853	0/0:17,0:12:30.10:0,30,593	0/0:7,0:6:18.06:0,18,360	0/0:22,0:21:48.16:0,48,934	0/0:12,0:12:24.07:0,24,436	0/0:5,0:5:11.94:0,12,244	0/0:21,0:21:51.17:0,51,1014	0/0:13,0:12:23.67:0,24,487	0/0:16,0:15:45.15:0,45,907	0/0:14,0:14:30.09:0,30,553	0/0:8,0:8:18.06:0,18,366
chr10	66108396	.	T	TAA	7463.56	PASS	AB=1.000;AC=41;AF=0.732;AN=56;BaseQRankSum=0.685;DP=298;FS=0.000;HRun=7;HaplotypeScore=39.4968;InbreedingCoeff=0.7777;MQ=69.41;MQ0=4;MQRankSum=-2.335;QD=33.93;ReadPosRankSum=3.482;VQSLOD=4.0395;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:30.08:0,30,350	1/1:1,4:5:12.04:184,12,0	0/1:8,0:5:22.31:22,0,32	0/0:9,0:7:14.84:0,15,120	0/0:14,0:12:36.09:0,36,409	1/1:2,23:26:54.18:881,54,0	1/1:0,3:3:9.03:147,9,0	0/0:31,0:28:72.18:0,72,817	1/1:1,9:10:30.10:479,30,0	1/1:0,0:12:33.05:367,33,0	1/1:0,0:9:27.08:329,27,0	1/1:0,8:8:21.07:342,21,0	0/0:6,0:6:15.04:0,15,172	1/1:1,2:3:6.02:98,6,0	1/1:0,2:2:3.01:49,3,0	1/1:0,4:4:6.02:98,6,0	1/1:1,22:24:51.17:835,51,0	1/1:8,0:20:50.50:547,50,0	1/1:2,9:10:27.09:441,27,0	1/1:1,4:5:12.04:187,12,0	1/1:0,5:6:12.04:197,12,0	1/1:0,5:5:9.03:148,9,0	0/0:3,0:3:9.03:0,9,105	0/0:3,0:3:6.02:0,6,70	1/1:1,15:16:33.11:541,33,0	1/1:1,8:9:24.08:394,24,0	1/1:1,18:20:45.15:735,45,0	1/1:0,9:10:27.09:443,27,0
chr10	66108862	.	AGAG	A	2727.91	PASS	AB=0.990;AC=20;AF=0.357;AN=56;BaseQRankSum=16.210;DP=603;FS=18.926;HRun=0;HaplotypeScore=204.5329;InbreedingCoeff=-0.4101;MQ=42.32;MQ0=14;MQRankSum=-14.146;QD=7.47;ReadPosRankSum=3.309;VQSLOD=1.4505;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:84.62:0,85,1964	0/1:10,0:10:99:100,0,101	0/0:37,0:5:12.03:0,12,234	0/0:32,0:8:21.07:0,21,418	0/0:23,0:23:66.18:0,66,1316	0/1:20,0:20:36.09:36,0,106	0/1:17,0:17:38.82:39,0,139	0/0:27,0:25:69.66:0,70,1386	0/1:12,0:13:63.70:86,0,64	0/1:21,6:26:17.14:428,0,17	1/1:12,8:20:42.03:423,42,0	0/1:19,0:19:90.92:91,0,279	0/0:14,0:14:42.14:0,42,936	0/1:15,0:15:37.54:38,0,202	0/1:18,0:18:99:208,0,139	0/1:18,0:18:99:245,0,144	0/1:24,0:25:60.22:60,0,227	0/0:9,0:9:5.93:0,6,172	0/1:15,0:14:20.24:20,0,188	0/1:25,0:25:99:256,0,138	0/1:17,0:18:29.17:29,0,143	0/1:18,0:17:92.52:162,0,93	0/0:22,0:22:66.19:0,66,1344	0/0:40,0:40:99:0,114,2469	0/1:15,0:15:85.68:86,0,167	0/1:29,0:29:99:298,0,112	0/1:28,0:29:99:197,0,219	0/1:12,0:12:91.66:92,0,133
chr10	66108865	.	GGAA	G	5024.27	PASS	AB=0.750;AC=24;AF=0.429;AN=56;BaseQRankSum=15.624;DP=605;FS=14.013;HRun=0;HaplotypeScore=200.1806;InbreedingCoeff=-0.1596;MQ=43.00;MQ0=14;MQRankSum=-12.418;QD=13.47;ReadPosRankSum=2.387;VQSLOD=3.7225;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:76.47:0,76,1936	0/1:4,6:10:24.98:176,0,25	0/0:36,0:5:9.03:0,9,204	0/0:33,0:9:17.70:0,18,369	0/0:24,0:24:66.11:0,66,1340	0/1:17,2:19:43.37:109,0,43	0/1:14,4:18:99:117,0,117	0/0:28,0:26:75.62:0,76,1395	1/1:11,1:12:21.66:239,22,0	1/1:28,0:27:22.72:280,23,0	1/1:20,0:20:40.35:228,40,0	0/1:13,6:19:89.16:223,0,89	0/0:15,0:15:45.09:0,45,953	0/1:12,3:15:28:116,0,28	0/1:11,8:19:35.34:340,0,35	0/1:8,11:19:38.85:459,0,39	0/1:12,12:24:99:151,0,120	0/1:7,1:8:34.76:35,0,76	0/1:13,1:13:67.44:129,0,67	0/1:10,15:25:7.20:512,0,7	0/1:20,2:19:36.09:125,0,36	1/1:8,10:17:8.90:289,9,0	0/0:23,0:23:66.19:0,66,1323	0/0:39,0:39:99:0,111,2448	0/1:8,8:16:15.71:216,0,16	0/1:15,11:26:9.10:605,0,9	0/1:16,13:29:27.61:467,0,28	0/1:5,7:12:64.17:211,0,64
chr10	66108874	.	GGAA	G	5093.08	PASS	AB=0.847;AC=24;AF=0.429;AN=56;BaseQRankSum=16.154;DP=594;FS=18.502;HRun=0;HaplotypeScore=201.2610;InbreedingCoeff=-0.1739;MQ=41.65;MQ0=12;MQRankSum=-12.263;QD=13.95;ReadPosRankSum=6.196;VQSLOD=3.1748;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:60.59:0,61,1837	0/1:5,4:9:25.23:176,0,25	0/0:32,0:4:12:0,12,156	0/0:37,0:8:17.70:0,18,336	0/0:23,0:23:66.17:0,66,1437	0/1:15,2:17:12.88:88,0,13	0/1:20,2:22:99:155,0,136	0/0:27,0:25:72.69:0,73,1545	1/1:14,0:14:6.66:240,7,0	1/1:23,3:26:37.32:346,37,0	1/1:12,8:20:45.51:399,46,0	0/1:16,3:19:99:214,0,104	0/0:16,0:16:45.15:0,45,958	0/1:12,2:14:23.95:116,0,24	0/1:18,4:22:34.15:348,0,34	0/1:14,4:18:43.50:433,0,43	0/1:21,2:24:99:182,0,115	0/1:7,1:8:12.81:13,0,82	0/1:7,1:8:62.16:62,0,77	0/1:18,6:24:10.73:482,0,11	0/1:22,0:19:42.67:88,0,43	1/1:13,5:18:11.25:307,11,0	0/0:22,0:22:66.23:0,66,1465	0/0:37,0:37:99:0,102,2298	0/1:11,4:15:17.17:216,0,17	0/1:20,4:24:15.49:557,0,15	0/1:17,9:26:32.97:442,0,33	0/1:10,5:15:99:225,0,102
chr10	66108877	.	A	AGAGGAGGTGGAG	17838.98	PASS	AB=1.000;AC=37;AF=0.661;AN=56;BaseQRankSum=14.421;DP=595;FS=14.861;HRun=0;HaplotypeScore=258.8567;InbreedingCoeff=0.7011;MQ=41.48;MQ0=11;MQRankSum=-12.842;QD=48.34;ReadPosRankSum=1.930;VQSLOD=2.9185;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:77.89:0,78,2330	1/1:8,0:8:24.08:655,24,0	0/0:26,0:3:6.01:0,6,85	0/0:36,0:6:15.90:0,16,245	0/0:22,0:22:66.21:0,66,1848	1/1:4,12:22:9.03:257,9,0	1/1:24,0:24:24.35:697,24,0	0/0:30,0:28:67.79:0,68,1659	1/1:14,0:14:16.10:642,16,0	1/1:21,0:26:55.52:1388,56,0	1/1:16,0:20:44.63:1100,45,0	1/1:17,0:17:42.14:997,42,0	0/0:15,0:15:39.13:0,39,1193	1/1:13,0:13:36.08:763,36,0	1/1:22,0:22:51.89:1050,52,0	1/1:17,0:18:42.14:1314,42,0	1/1:22,0:23:44.76:684,45,0	0/1:10,0:10:34.30:63,0,34	0/1:8,0:8:53.79:274,0,54	1/1:22,0:23:60.17:1533,60,0	1/1:17,0:17:1.52:174,2,0	1/1:16,0:16:36.06:998,36,0	0/0:22,0:22:63.22:0,63,1803	0/0:38,0:38:99:0,102,3292	1/1:16,0:16:27.08:740,27,0	1/1:28,0:28:63.16:1928,63,0	1/1:26,0:26:72.01:1698,72,0	0/1:16,0:16:59.15:884,0,59
chr10	66108880	.	GGAA	G	3644.80	PASS	AB=0.990;AC=21;AF=0.375;AN=56;BaseQRankSum=14.564;DP=588;FS=8.499;HRun=0;HaplotypeScore=203.6774;InbreedingCoeff=-0.4089;MQ=41.02;MQ0=11;MQRankSum=-11.381;QD=10.24;ReadPosRankSum=7.061;VQSLOD=1.4010;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:91.63:0,92,1810	0/1:9,0:9:19.79:130,0,20	0/0:28,0:3:6.02:0,6,95	0/0:40,0:6:14.61:0,15,202	0/0:23,0:23:69.21:0,69,1423	0/1:19,0:19:29.97:102,0,30	0/1:23,0:23:30.22:30,0,316	0/0:32,0:30:72.17:0,72,1599	0/1:14,0:14:99:101,0,121	0/1:25,0:25:99:237,0,140	0/1:20,0:20:14.86:312,0,15	0/1:15,1:16:61.13:190,0,61	0/0:15,0:15:39.11:0,39,811	1/1:12,0:12:32.49:274,32,0	0/1:22,0:21:93.74:295,0,94	0/1:17,0:17:32.60:202,0,33	0/1:20,0:20:52.34:128,0,52	0/1:9,0:9:46.11:46,0,86	0/1:8,0:8:62.53:124,0,63	0/1:22,0:22:4.96:204,0,5	0/1:20,0:18:17.78:18,0,100	0/1:14,1:15:6.09:142,0,6	0/0:23,0:23:66.22:0,66,1402	0/0:37,0:37:99:0,102,2209	0/1:15,0:15:96.98:110,0,97	0/1:27,1:28:99:388,0,112	0/1:25,1:26:22:417,0,22	0/1:16,0:16:99:194,0,170
chr10	66108882	.	A	AGGT	5575.06	PASS	AB=0.946;AC=26;AF=0.464;AN=56;BaseQRankSum=13.943;DP=571;FS=11.833;HRun=0;HaplotypeScore=194.2442;InbreedingCoeff=-0.0723;MQ=40.96;MQ0=13;MQRankSum=-10.987;QD=16.30;ReadPosRankSum=6.602;VQSLOD=3.1068;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:92.90:0,93,1534	1/1:8,1:9:0.73:259,1,0	0/0:27,0:2:6.02:0,6,104	0/0:40,0:7:15.02:0,15,218	0/0:23,0:23:69.21:0,69,1221	0/1:19,0:19:12.98:117,0,13	0/1:22,1:23:99:113,0,239	0/0:33,0:31:85.08:0,85,1419	0/1:11,2:13:99:170,0,132	0/1:23,0:22:98.21:269,0,98	0/1:17,0:17:36.80:234,0,37	0/1:14,2:16:20:402,0,20	0/0:15,0:15:42.13:0,42,750	1/1:9,1:11:32.58:404,33,0	0/1:21,1:22:24.11:429,0,24	1/1:15,0:15:6.61:337,7,0	0/1:19,0:19:42.10:172,0,42	0/1:9,0:9:17.68:18,0,55	0/1:5,1:6:30.96:109,0,31	1/1:21,1:22:51.58:422,52,0	0/1:19,1:18:53.70:151,0,54	1/1:15,0:15:9.49:222,9,0	0/0:22,0:22:66.21:0,66,1197	0/0:36,0:36:99:0,102,1862	0/1:15,0:15:34.22:245,0,34	0/1:22,4:26:36.72:606,0,37	1/1:25,1:26:22.16:635,22,0	0/1:14,1:15:72.82:263,0,73
chr10	66109096	.	G	GA	14602.15	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-11.625;DP=684;FS=0.927;HRun=4;HaplotypeScore=62.7274;InbreedingCoeff=0.9999;MQ=84.75;MQ0=0;MQRankSum=-4.101;QD=36.23;ReadPosRankSum=3.116;VQSLOD=5.1134;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,144,1633	1/1:0,12:12:33.11:451,33,0	0/0:30,0:30:87.18:0,87,951	0/0:17,0:17:51.15:0,51,577	0/0:29,0:29:84.24:0,84,952	1/1:4,21:25:57.19:773,57,0	1/1:1,29:30:78.26:1067,78,0	0/0:43,0:43:99:0,117,1319	1/1:1,16:17:39.13:527,39,0	0/0:32,0:32:87.25:0,87,987	0/0:17,0:17:48.13:0,48,540	1/1:1,17:18:51.17:697,51,0	0/0:14,0:14:39.10:0,39,433	1/1:1,19:20:54.18:739,54,0	1/1:1,28:29:81.27:1106,81,0	1/1:1,17:18:45.15:615,45,0	1/1:0,29:29:81.27:1108,81,0	1/1:1,16:17:48.16:656,48,0	1/1:2,37:39:99:1501,111,0	1/1:2,22:24:63.21:861,63,0	1/1:2,15:17:48.16:650,48,0	1/1:1,15:16:42.14:574,42,0	0/0:26,0:26:72.19:0,72,806	0/0:24,0:24:63.12:0,63,691	1/1:1,13:14:36.12:492,36,0	1/1:1,24:25:69.17:902,69,0	1/1:1,36:37:99:1349,99,0	1/1:0,16:16:39.13:533,39,0
chr10	66109254	.	A	AGAG	26538.97	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-13.842;DP=677;FS=11.343;HRun=0;HaplotypeScore=84.7654;InbreedingCoeff=0.9967;MQ=87.45;MQ0=0;MQRankSum=-6.215;QD=58.20;ReadPosRankSum=3.195;VQSLOD=6.1357;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:59,0:59:99:0,178,2860	1/1:1,5:7:15.05:340,15,0	0/0:28,0:28:74.59:0,75,1038	0/0:24,0:24:63.19:0,63,989	0/0:22,0:22:66.23:0,66,1099	1/1:2,18:20:54.19:1218,54,0	1/1:5,20:25:57.20:1279,57,0	0/0:31,0:31:81.26:0,81,1300	1/1:2,21:23:60.21:1333,60,0	1/1:2,21:24:72.23:1566,72,0	1/1:0,17:17:51.18:1150,51,0	1/1:0,19:19:51.18:1152,51,0	0/0:15,0:15:42.14:0,42,699	1/1:3,18:21:51.18:1129,51,0	1/1:2,22:24:63.22:1426,63,0	1/1:2,15:18:45.15:1017,45,0	1/1:2,40:42:99:2513,111,0	1/1:0,18:18:48.16:1052,48,0	1/1:6,23:30:84.27:1817,84,0	1/1:3,23:27:63.17:1327,63,0	1/1:1,33:34:93.32:2058,93,0	1/1:2,23:25:66.23:1467,66,0	0/0:24,0:23:69.24:0,69,1149	0/0:18,0:18:54.18:0,54,899	1/1:1,15:16:45.15:982,45,0	1/1:3,21:24:69.22:1516,69,0	1/1:2,29:32:78.27:1750,78,0	1/1:3,6:9:21.07:446,21,0
chr10	66109428	.	G	GC	21445.02	PASS	AB=0.655;AC=54;AF=0.964;AN=56;BaseQRankSum=-3.299;DP=605;FS=1.184;HRun=0;HaplotypeScore=118.0131;InbreedingCoeff=-0.0371;MQ=78.74;MQ0=0;MQRankSum=-5.123;QD=35.45;ReadPosRankSum=3.062;VQSLOD=4.4978;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,1:44:99:1027,117,0	1/1:0,12:12:36.12:573,36,0	0/1:8,0:15:74.05:104,0,74	0/1:9,0:22:94:143,0,94	1/1:0,0:16:47.93:415,48,0	1/1:0,13:13:39.13:622,39,0	1/1:2,15:17:45.15:718,45,0	1/1:1,0:34:94.93:653,95,0	1/1:2,26:28:78.27:1238,78,0	1/1:1,25:26:75.22:1148,75,0	1/1:2,7:9:27.07:385,27,0	1/1:1,15:16:45.14:692,45,0	1/1:1,0:22:65.99:604,66,0	1/1:2,21:23:63.17:976,63,0	1/1:4,24:28:84.26:1289,84,0	1/1:2,16:18:48.16:765,48,0	1/1:3,26:29:78.27:1240,78,0	1/1:4,18:23:60.16:909,60,0	1/1:4,27:31:90.31:1425,90,0	1/1:1,16:17:45.15:716,45,0	1/1:5,30:35:84.09:1278,84,0	1/1:0,16:16:42.14:670,42,0	1/1:3,0:17:38.97:351,39,0	1/1:1,0:28:65.35:590,65,0	1/1:0,14:14:42.14:671,42,0	1/1:1,12:13:36.12:573,36,0	1/1:2,24:26:72.25:1144,72,0	1/1:1,11:12:33.11:526,33,0
chr10	66109884	.	T	TA	23948.44	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-12.906;DP=804;FS=0.282;HRun=0;HaplotypeScore=80.9071;InbreedingCoeff=0.9813;MQ=88.21;MQ0=0;MQRankSum=-5.478;QD=42.24;ReadPosRankSum=4.043;VQSLOD=5.3419;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,147,2030	1/1:0,7:7:18.06:288,18,0	0/0:34,0:34:96.41:0,96,1284	0/0:34,0:34:91.78:0,92,1238	0/0:18,0:18:54.18:0,54,749	1/1:0,14:14:36.12:573,36,0	1/1:0,31:31:78.27:1247,78,0	0/0:22,0:22:66.06:0,66,849	1/1:0,41:41:99:1773,120,0	1/1:1,24:25:63.39:1093,63,0	1/1:0,19:19:42.04:671,42,0	1/1:0,31:31:75.26:1193,75,0	0/0:31,0:31:93.29:0,93,1281	1/1:0,36:36:87.30:1390,87,0	1/1:1,38:39:99:1626,100,0	1/1:0,37:37:99:1630,102,0	1/1:0,41:41:99:1821,114,0	1/1:0,21:21:63.21:1007,63,0	1/1:0,19:19:57.14:833,57,0	1/1:0,24:24:69.18:1073,69,0	1/1:1,64:65:99:2720,172,0	1/1:0,26:26:66.23:1055,66,0	0/0:20,0:20:60.19:0,60,821	0/0:29,0:29:87.25:0,87,1164	1/1:1,20:21:54.18:863,54,0	1/1:1,28:29:84.28:1320,84,0	1/1:1,37:38:99:1678,105,0	1/1:0,3:3:6.02:96,6,0
chr10	66110446	.	GA	G	9301.38	PASS	AB=1.000;AC=37;AF=0.661;AN=56;BaseQRankSum=13.411;DP=673;FS=4.592;HRun=9;HaplotypeScore=69.2983;InbreedingCoeff=0.9491;MQ=75.18;MQ0=0;MQRankSum=-2.377;QD=22.36;ReadPosRankSum=2.925;VQSLOD=5.8828;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,141,1600	1/1:2,6:8:18.01:165,18,0	0/0:23,1:23:13.86:0,14,370	0/1:15,0:14:0.55:1,0,220	0/0:29,0:29:75.22:0,75,866	1/1:2,18:20:51.03:467,51,0	1/1:2,15:17:36.02:330,36,0	0/0:30,1:31:53.76:0,54,862	1/1:1,17:18:48.02:439,48,0	0/0:29,0:29:81.22:0,81,916	0/0:25,0:25:60.17:0,60,683	1/1:1,28:30:77.08:692,77,0	0/0:26,0:26:72.21:0,72,829	1/1:1,18:19:45:407,45,0	1/1:2,33:35:99:906,99,0	1/1:3,18:21:50.89:466,51,0	1/1:2,20:22:57.03:522,57,0	1/1:1,19:20:57.03:521,57,0	1/1:1,16:17:48.01:435,48,0	1/1:5,19:24:60.03:548,60,0	1/1:4,26:30:66.03:604,66,0	1/1:3,28:31:78.03:713,78,0	0/0:18,0:18:45.13:0,45,518	0/0:22,0:22:60.14:0,60,677	1/1:1,17:19:47.06:418,47,0	1/1:3,31:35:95.03:844,95,0	1/1:1,29:30:78.04:714,78,0	1/1:1,4:5:12.01:110,12,0
chr10	66111492	.	C	CCCAAT	3072.06	PASS	AB=0.561;AC=3;AF=0.054;AN=56;BaseQRankSum=-6.732;DP=698;FS=6.392;HRun=0;HaplotypeScore=126.3476;InbreedingCoeff=0.8172;MQ=91.26;MQ0=0;MQRankSum=-4.027;QD=71.44;ReadPosRankSum=0.557;VQSLOD=5.3020;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,141,2996	0/0:12,0:12:30.10:0,30,640	0/0:31,0:31:93.08:0,93,1746	0/0:28,0:28:76.63:0,77,1373	0/0:25,0:25:72.23:0,72,1496	0/0:18,0:18:54.19:0,54,1151	0/0:25,0:25:72.25:0,72,1535	0/0:23,0:23:51.17:0,51,1069	0/1:5,18:23:0.74:1755,0,1	0/0:24,0:24:72.25:0,72,1535	0/0:18,0:18:51.16:0,51,1027	0/0:22,0:22:60.21:0,60,1259	0/0:18,0:18:51.13:0,51,1043	0/0:20,0:20:54.16:0,54,999	0/0:29,0:29:84.29:0,84,1776	0/0:23,0:23:69.22:0,69,1432	0/0:28,0:28:78.26:0,78,1585	1/1:2,17:20:48.16:1423,48,0	0/0:16,0:16:45.15:0,45,949	0/0:27,0:27:75.24:0,75,1485	0/0:60,0:60:99:0,172,3600	0/0:32,0:32:96.33:0,96,2013	0/0:20,0:20:57.20:0,57,1214	0/0:26,0:26:78.27:0,78,1662	0/0:25,0:25:72.23:0,72,1476	0/0:34,0:34:99:0,99,2014	0/0:17,0:17:48.13:0,48,904	0/0:5,0:5:12.04:0,12,256
chr10	66111634	.	A	AC	831.48	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=-1.421;DP=514;FS=0.660;HRun=5;HaplotypeScore=95.7678;InbreedingCoeff=0.6307;MQ=74.23;MQ0=0;MQRankSum=1.233;QD=19.80;ReadPosRankSum=-2.998;VQSLOD=2.3838;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:43.14:0,43,512	0/0:7,0:7:11.19:0,11,62	0/0:12,0:12:21.03:0,21,216	0/0:8,0:8:7.87:0,8,174	0/0:12,0:12:17.52:0,18,162	0/0:18,0:18:13.79:0,14,193	0/0:27,0:27:65.36:0,65,342	0/0:17,0:17:40.03:0,40,219	0/0:32,0:32:81.50:0,81,449	0/1:15,0:15:1.36:1,0,102	0/0:9,0:9:20.12:0,20,104	0/0:22,0:22:60.28:0,60,313	0/0:16,0:16:31.25:0,31,351	0/0:17,0:17:15.89:0,16,170	0/0:22,0:22:35.98:0,36,251	0/0:14,0:14:31.39:0,31,165	0/0:26,0:26:69.76:0,70,381	1/1:1,26:27:75.07:926,75,0	0/0:14,0:14:23.49:0,23,127	0/0:6,0:6:8.36:0,8,47	0/0:47,0:46:99:0,109,622	0/0:16,0:16:46.28:0,46,252	0/0:11,0:11:20.20:0,20,204	0/0:25,0:25:72.08:0,72,757	0/0:15,0:15:24.31:0,24,137	0/0:25,0:25:35.15:0,35,261	0/0:15,0:15:40.57:0,41,224	0/0:8,0:8:14.25:0,14,78
chr10	66112774	.	AG	A	6142.17	PASS	AB=0.684;AC=43;AF=0.768;AN=56;BaseQRankSum=-0.837;DP=476;FS=3.095;HRun=11;HaplotypeScore=78.3872;InbreedingCoeff=0.8641;MQ=57.14;MQ0=9;MQRankSum=0.891;QD=15.87;ReadPosRankSum=5.736;VQSLOD=5.5622;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:9,9:19:42.37:316,42,0	0/0:5,0:5:8.96:0,9,82	0/0:21,0:7:11.26:0,11,77	0/0:8,0:4:5.81:0,6,45	1/1:7,10:17:32.56:260,33,0	1/1:3,19:23:40.97:325,41,0	1/1:13,16:29:61.44:495,61,0	0/0:29,0:25:46.68:0,47,291	1/1:3,0:21:31.86:92,32,0	0/0:18,0:17:21.03:0,21,212	0/0:8,0:8:14.46:0,14,141	1/1:7,7:14:29.94:244,30,0	1/1:10,12:24:48.80:372,49,0	1/1:7,11:18:26.65:202,27,0	1/1:3,13:16:44.93:366,45,0	1/1:1,9:10:26.97:222,27,0	1/1:8,18:30:69.60:518,70,0	1/1:4,13:16:38.95:319,39,0	1/1:5,8:13:31.51:249,32,0	1/1:3,7:10:23.96:196,24,0	1/1:18,15:33:27.99:411,28,0	1/1:8,11:19:41.93:342,42,0	1/1:4,6:10:17.97:147,18,0	1/1:6,11:17:38.89:313,39,0	1/1:5,9:14:38.94:319,39,0	0/1:7,6:13:2.71:147,0,3	1/1:4,9:13:29.87:237,30,0	1/1:3,1:4:5.96:49,6,0
chr10	66112898	.	GC	G	5080.90	PASS	AB=0.692;AC=52;AF=0.963;AN=54;BaseQRankSum=1.922;DP=463;FS=4.719;HRun=3;HaplotypeScore=285.8095;InbreedingCoeff=0.0305;MQ=37.63;MQ0=0;MQRankSum=-0.038;QD=10.97;ReadPosRankSum=1.231;VQSLOD=2.9324;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,26:30:56.73:243,57,0	1/1:1,13:14:26.44:136,26,0	./.	0/1:3,1:4:12.64:13,0,15	1/1:0,11:11:17.44:63,17,0	1/1:1,18:18:44.67:226,45,0	1/1:0,28:28:70.91:321,71,0	1/1:1,6:6:17.65:109,18,0	1/1:0,12:12:32.80:159,33,0	1/1:0,18:18:20.03:249,20,0	1/1:2,11:13:15.50:65,16,0	1/1:3,22:25:60.58:310,61,0	1/1:1,20:21:39.53:212,40,0	1/1:1,22:22:57.10:282,57,0	1/1:2,18:20:43.01:220,43,0	1/1:0,19:19:53.27:288,53,0	1/1:4,13:17:39.19:239,39,0	1/1:1,6:7:17.15:88,17,0	1/1:2,11:13:37.50:298,38,0	0/1:4,10:14:0.31:89,0,0	1/1:1,25:25:32.46:154,32,0	1/1:1,19:20:25.51:173,26,0	1/1:1,13:14:31.82:149,32,0	1/1:4,15:19:23.04:87,23,0	1/1:2,19:21:41.31:222,41,0	1/1:0,11:11:25.71:188,26,0	1/1:3,28:31:79.18:405,79,0	1/1:1,5:6:17.34:92,17,0
chr10	66113023	.	G	GAACGAGGAAGCAGAATCCA	13098.09	PASS	AB=0.962;AC=11;AF=0.196;AN=56;BaseQRankSum=3.309;DP=605;FS=26.706;HRun=0;HaplotypeScore=300.9681;InbreedingCoeff=0.8195;MQ=79.94;MQ0=0;MQRankSum=-10.832;QD=123.57;ReadPosRankSum=-1.704;VQSLOD=3.4055;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,99,4770	0/0:7,0:7:18.06:0,18,934	0/0:20,0:20:51.17:0,51,1857	0/0:20,0:20:50.84:0,51,2069	0/0:20,0:20:57.20:0,57,3057	0/0:33,0:33:93.32:0,93,4598	0/0:30,0:30:90.28:0,90,4217	1/1:26,0:26:72.24:3622,72,0	1/1:13,5:18:51.18:3491,51,0	1/1:16,3:18:48.11:2881,48,0	1/1:7,2:9:18.06:1242,18,0	0/0:26,0:26:69.18:0,69,3376	0/0:20,0:20:45.14:0,45,2295	0/0:24,0:24:54.17:0,54,2624	0/0:21,0:21:57.19:0,57,2897	0/1:24,1:25:99:408,0,2649	0/0:30,0:30:87.27:0,87,4279	1/1:5,0:8:0.07:1454,0,0	0/0:18,0:18:51.12:0,51,2385	0/0:19,0:19:57.20:0,57,2745	0/0:25,0:25:57.20:0,57,2830	0/0:23,0:23:60.21:0,60,3026	0/0:23,0:23:60.18:0,60,2653	0/0:29,0:29:72.18:0,72,3207	0/0:15,0:15:36.11:0,36,1671	0/0:19,0:19:57.20:0,57,2681	0/0:31,0:31:87.30:0,87,3890	0/0:6,0:6:18.04:0,18,839
chr10	66113813	.	TCAAGTTGA	T	3031.29	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=7.451;DP=423;FS=32.593;HRun=0;HaplotypeScore=132.0574;InbreedingCoeff=0.9450;MQ=73.77;MQ0=2;MQRankSum=-8.625;QD=56.14;ReadPosRankSum=-0.036;VQSLOD=1.8210;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,114,4905	0/0:5,0:5:15.05:0,15,581	0/0:17,0:15:45.11:0,45,1516	0/0:22,0:20:9.34:0,9,949	0/0:13,0:13:39.13:0,39,1692	0/0:14,0:14:42.13:0,42,1661	0/0:25,0:25:72.23:0,72,3020	1/1:1,12:13:33:692,33,0	1/1:3,9:13:24.08:685,24,0	1/1:0,13:13:33.09:882,33,0	1/1:1,5:6:12.04:343,12,0	0/0:12,0:12:33.11:0,33,1410	0/0:11,0:11:33.10:0,33,1329	0/0:11,0:11:33.11:0,33,1435	0/0:18,0:18:51.18:0,51,2057	1/1:1,8:9:21.07:601,21,0	0/0:29,0:29:87.29:0,87,3781	0/0:22,0:22:63.22:0,63,2719	0/0:13,0:12:33.11:0,33,1244	0/0:13,0:13:39.13:0,39,1710	0/0:28,0:28:81.28:0,81,3566	0/0:7,0:7:21.07:0,21,683	0/0:6,0:6:15.05:0,15,543	0/0:28,0:28:72.25:0,72,3197	0/0:6,0:6:18.05:0,18,680	0/0:10,0:10:30.10:0,30,1278	0/0:16,0:15:45.15:0,45,1770	0/0:2,0:2:6.02:0,6,268
chr10	66114697	.	G	GAAAGA	11155.58	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-10.647;DP=736;FS=15.932;HRun=0;HaplotypeScore=134.0136;InbreedingCoeff=1.0000;MQ=71.96;MQ0=0;MQRankSum=-5.915;QD=78.56;ReadPosRankSum=-2.194;VQSLOD=5.3770;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,147,3017	0/0:19,0:19:54.17:0,54,1111	0/0:18,0:18:41.92:0,42,754	0/0:24,0:24:54.17:0,54,1023	0/0:19,0:19:54.06:0,54,1048	0/0:24,0:24:54.12:0,54,1066	0/0:21,0:21:60.14:0,60,1152	1/1:10,30:39:99:3355,114,0	1/1:9,19:28:75.25:2176,75,0	1/1:14,25:39:99:2841,108,0	1/1:3,15:18:51.18:1553,51,0	0/0:21,0:21:51.15:0,51,1038	0/0:17,0:17:45.14:0,45,957	0/0:19,0:19:48.11:0,48,976	0/0:27,0:27:75.22:0,75,1553	1/1:9,8:17:51.12:1231,51,0	0/0:20,0:20:51.16:0,51,1046	0/0:23,0:23:60.19:0,60,1238	0/0:23,0:23:63.14:0,63,1090	0/0:31,0:31:84.23:0,84,1705	0/0:22,0:22:66.23:0,66,1401	0/0:37,0:37:99:0,99,1935	0/0:33,0:33:87.21:0,87,1760	0/0:36,0:36:99:0,102,1956	0/0:28,0:28:69.17:0,69,1370	0/0:43,0:43:99:0,117,2347	0/0:20,0:20:54.17:0,54,1108	0/0:18,0:18:48.16:0,48,1011
chr10	66114838	.	AC	A	562.21	PASS	AB=0.985;AC=16;AF=0.286;AN=56;BaseQRankSum=10.894;DP=779;FS=154.246;HRun=1;HaplotypeScore=230.5451;InbreedingCoeff=-0.2760;MQ=36.39;MQ0=6;MQRankSum=-11.681;QD=1.32;ReadPosRankSum=4.839;VQSLOD=-0.0862;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:34.20:0,34,583	0/0:12,0:12:1.28:0,1,169	0/0:18,0:11:33.10:0,33,407	0/0:24,0:13:39.02:0,39,474	0/0:35,0:35:12.40:0,12,207	0/0:24,1:24:5.70:0,6,90	0/0:38,0:37:41.80:0,42,552	0/0:37,0:33:4.30:0,4,742	0/1:28,0:28:16.89:17,0,217	0/1:50,0:49:15.73:16,0,920	0/0:30,0:30:19.26:0,19,232	0/1:24,0:24:27.64:28,0,42	0/0:22,0:22:6.85:0,7,227	0/1:25,0:25:31.14:31,0,63	0/1:24,0:24:7.73:8,0,81	1/1:14,0:14:7.09:34,7,0	0/0:20,0:20:9.97:0,10,351	0/1:13,0:12:16.55:17,0,265	0/1:12,2:14:41.55:42,0,282	0/1:38,0:38:6.24:6,0,220	0/0:21,0:19:30.56:0,31,360	0/1:34,0:34:28.68:29,0,32	0/1:39,0:39:14.60:69,0,15	0/0:31,1:32:29.98:0,30,401	0/1:51,1:52:30.80:259,0,31	0/1:42,1:43:99:107,0,710	0/1:18,1:18:19.97:20,0,298	0/1:8,0:8:35.77:36,0,110
chr10	66114840	.	AC	A	1239.22	PASS	AB=0.968;AC=21;AF=0.375;AN=56;BaseQRankSum=11.331;DP=770;FS=191.669;HRun=1;HaplotypeScore=231.8500;InbreedingCoeff=-0.3317;MQ=35.50;MQ0=6;MQRankSum=-12.453;QD=2.41;ReadPosRankSum=5.727;VQSLOD=-0.7243;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,1:39:31.03:0,31,545	0/1:11,1:12:59.71:60,0,143	0/0:16,0:9:27.08:0,27,336	0/0:23,0:12:36.08:0,36,440	0/0:33,1:34:8.48:0,8,181	0/1:26,0:25:58.66:59,0,84	0/0:39,0:38:16.22:0,16,520	0/1:32,4:32:93.39:93,0,684	0/1:28,1:29:41.45:41,0,214	0/1:46,1:46:99:140,0,829	0/0:28,2:30:19.26:0,19,228	0/1:23,1:25:30.02:42,0,30	0/1:20,2:22:20.60:21,0,200	0/1:24,1:25:59.28:73,0,59	0/1:24,0:24:16.27:16,0,68	1/1:13,1:14:4.30:40,4,0	0/0:21,0:21:9.03:0,9,357	0/1:11,1:11:46.11:46,0,228	0/1:12,0:12:40.98:41,0,227	0/1:37,2:39:13.55:14,0,210	0/0:21,0:19:30.56:0,31,361	0/1:32,1:33:16.39:16,0,37	0/1:39,0:39:19.38:44,0,19	0/0:32,0:32:16.18:0,16,383	1/1:50,2:52:35.99:368,36,0	0/1:43,0:43:99:196,0,687	0/1:19,0:18:35.10:35,0,297	0/1:6,0:6:61.40:61,0,68
chr10	66114841	.	CA	C	1674.98	PASS	AB=0.900;AC=20;AF=0.357;AN=56;BaseQRankSum=7.999;DP=772;FS=157.387;HRun=1;HaplotypeScore=235.1500;InbreedingCoeff=-0.3251;MQ=34.84;MQ0=6;MQRankSum=-11.941;QD=3.18;ReadPosRankSum=5.866;VQSLOD=0.2670;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,2:39:33.96:0,34,536	0/1:9,3:12:99:130,0,147	0/0:14,0:7:21.07:0,21,267	0/0:22,0:11:33.09:0,33,397	0/0:30,2:34:20.79:0,21,215	0/1:20,6:25:75.73:182,0,76	0/1:37,2:38:16.38:16,0,494	0/1:31,5:32:99:135,0,672	0/1:27,2:29:55.23:55,0,217	0/1:43,3:46:99:266,0,818	0/0:26,4:30:19.43:0,19,217	0/1:20,4:24:39.89:109,0,40	0/1:21,1:22:37.28:37,0,239	0/1:18,7:25:67.19:100,0,67	0/0:22,2:24:12.39:0,12,93	0/1:14,0:14:3.18:7,0,3	0/0:19,2:21:5.14:0,5,359	0/1:10,2:11:88.03:88,0,227	0/1:10,3:13:79:79,0,228	0/0:35,4:40:8.37:0,8,249	0/0:21,0:19:30.09:0,30,360	0/1:29,5:34:2.60:3,0,35	0/1:35,3:39:5.30:5,0,40	0/1:31,1:32:2.69:3,0,354	1/1:46,5:54:34.19:246,34,0	0/1:38,5:43:99:324,0,665	0/1:19,1:19:3.66:4,0,305	0/1:6,0:6:44.20:44,0,72
chr10	66114844	.	AC	A	1235.42	PASS	AB=0.984;AC=17;AF=0.304;AN=56;BaseQRankSum=11.954;DP=766;FS=167.274;HRun=1;HaplotypeScore=228.3197;InbreedingCoeff=-0.1653;MQ=34.08;MQ0=6;MQRankSum=-9.779;QD=2.88;ReadPosRankSum=5.793;VQSLOD=0.1516;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:18.68:0,19,397	0/1:11,1:12:85.41:85,0,108	0/0:14,0:7:21.06:0,21,259	0/0:20,0:9:27.03:0,27,308	0/0:32,1:35:21.50:0,22,238	0/1:26,0:25:88.44:88,0,95	0/0:37,0:36:0.52:0,1,401	0/1:34,0:31:25.07:25,0,556	0/1:27,2:29:55.99:56,0,202	0/1:46,0:47:99:119,0,860	0/0:27,0:28:16.25:0,16,193	0/1:25,0:25:35.51:36,0,67	0/1:22,0:23:16.61:17,0,285	0/1:24,0:25:56.19:62,0,56	0/0:24,1:26:6.23:0,6,80	1/1:13,0:14:4.98:43,5,0	0/0:21,0:21:23.88:0,24,390	0/0:12,0:11:6.31:0,6,242	0/1:12,0:13:22.77:23,0,222	0/0:38,0:38:8.68:0,9,224	0/0:20,0:18:27.55:0,28,322	0/1:35,0:36:7.79:80,0,8	0/1:39,1:40:47.01:89,0,47	0/0:28,1:30:7.17:0,7,305	1/1:43,9:54:45.57:442,46,0	0/1:37,2:43:99:210,0,564	0/0:20,0:19:22.89:0,23,330	0/1:6,0:6:23.66:24,0,69
chr10	66114845	.	CA	C	1965.12	PASS	AB=0.995;AC=22;AF=0.393;AN=56;BaseQRankSum=7.120;DP=763;FS=151.776;HRun=1;HaplotypeScore=230.5462;InbreedingCoeff=-0.3793;MQ=33.81;MQ0=6;MQRankSum=-11.119;QD=3.50;ReadPosRankSum=5.382;VQSLOD=0.5363;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:36,0:36:1.51:2,0,377	0/1:13,0:13:99:132,0,111	0/0:12,0:6:18.06:0,18,229	0/0:18,0:8:24.05:0,24,281	0/0:36,0:36:20.50:0,20,199	0/1:27,0:26:88.82:178,0,89	0/1:35,1:35:23.12:23,0,405	0/1:35,0:31:87.50:87,0,534	0/1:29,0:29:37.12:37,0,205	0/1:46,1:46:99:150,0,835	0/0:27,1:28:16.43:0,16,170	0/1:25,0:25:79.74:89,0,80	0/1:22,0:22:41.03:41,0,303	0/1:25,0:25:64.99:103,0,65	0/0:27,0:27:8.71:0,9,87	1/1:14,0:14:4.56:55,5,0	0/0:21,0:21:7.09:0,7,398	0/1:12,0:11:51.24:51,0,228	0/1:13,0:13:38.99:39,0,232	0/0:38,0:38:1.34:0,1,174	0/0:20,0:18:27.08:0,27,322	0/1:36,0:36:21.43:111,0,21	0/1:38,1:41:23.90:191,0,24	0/1:30,0:30:21.17:21,0,333	1/1:54,0:54:41.47:408,41,0	0/1:40,1:41:99:357,0,498	0/1:20,0:19:6.41:6,0,299	0/1:6,0:6:44.05:44,0,80
chr10	66114847	.	CA	C	1558.27	PASS	AB=0.992;AC=20;AF=0.357;AN=56;BaseQRankSum=9.996;DP=747;FS=159.734;HRun=1;HaplotypeScore=212.4629;InbreedingCoeff=-0.3253;MQ=33.39;MQ0=6;MQRankSum=-9.967;QD=3.19;ReadPosRankSum=6.176;VQSLOD=0.2944;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:11.92:0,12,389	0/1:12,1:13:89.11:89,0,112	0/0:11,0:5:15.02:0,15,174	0/0:17,0:8:24.01:0,24,278	0/0:34,0:34:9.47:0,9,150	0/1:27,0:26:88.76:117,0,89	0/0:36,0:35:0.61:0,1,375	0/1:32,0:28:58.77:59,0,474	0/1:28,0:28:26.93:27,0,186	0/1:45,0:44:80.36:80,0,768	0/0:27,0:27:10.44:0,10,120	0/1:23,1:24:74.40:74,0,75	0/1:21,0:21:38.23:38,0,310	0/1:24,0:24:61.14:61,0,67	0/0:27,0:27:7.88:0,8,84	1/1:14,0:14:4.71:43,5,0	0/0:21,0:21:18.52:0,19,422	0/1:12,0:11:52.84:53,0,228	0/1:13,0:13:53.65:54,0,240	0/1:37,0:37:11.69:12,0,131	0/0:20,0:18:27.03:0,27,303	0/1:37,0:37:21.84:111,0,22	0/1:39,1:41:15.12:195,0,15	0/0:30,0:30:3.19:0,3,301	1/1:53,1:54:52.10:395,52,0	0/1:40,0:40:99:222,0,513	0/1:20,0:19:50.12:50,0,275	0/1:6,0:6:42.22:42,0,80
chr10	66114849	.	CA	C	1383.84	PASS	AB=0.993;AC=21;AF=0.375;AN=56;BaseQRankSum=10.855;DP=735;FS=160.841;HRun=1;HaplotypeScore=208.9707;InbreedingCoeff=-0.3443;MQ=33.04;MQ0=6;MQRankSum=-10.087;QD=2.67;ReadPosRankSum=6.741;VQSLOD=0.2868;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:11.48:0,11,369	0/1:13,0:13:54.09:54,0,112	0/0:10,0:4:12.04:0,12,150	0/0:16,0:7:20.85:0,21,234	0/1:35,0:35:11.19:11,0,137	0/1:25,1:25:57.63:58,0,78	0/0:35,0:34:10.51:0,11,340	0/1:30,0:26:52.30:52,0,412	0/1:27,1:28:28.14:28,0,177	0/1:45,0:44:99:102,0,721	0/0:26,0:26:9.03:0,9,118	0/1:24,0:24:46.92:47,0,96	0/1:22,0:22:44.62:45,0,297	0/1:25,0:25:22.99:23,0,72	0/0:27,0:27:4.90:0,5,77	1/1:12,1:13:4.44:39,4,0	0/0:20,0:20:25.68:0,26,415	0/1:11,0:11:44.97:45,0,209	0/1:13,0:13:32.29:32,0,234	0/1:36,0:36:30.88:31,0,94	0/0:19,0:17:24.07:0,24,283	0/1:36,0:36:25.27:111,0,25	0/1:41,1:42:13.24:205,0,13	0/0:27,1:29:14.76:0,15,297	1/1:52,1:53:41.56:333,42,0	0/1:39,1:40:99:228,0,461	0/1:19,0:19:56.36:56,0,295	0/1:6,0:6:49.98:50,0,79
chr10	66114851	.	CA	C	1375.13	PASS	AB=0.986;AC=22;AF=0.393;AN=56;BaseQRankSum=10.686;DP=706;FS=114.661;HRun=1;HaplotypeScore=198.7380;InbreedingCoeff=-0.2507;MQ=32.85;MQ0=6;MQRankSum=-7.326;QD=2.77;ReadPosRankSum=5.300;VQSLOD=0.2258;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,1:34:8.41:0,8,287	0/1:13,0:13:6.81:7,0,125	0/0:9,0:3:5.99:0,6,59	0/0:14,0:6:14.84:0,15,165	0/1:33,0:33:34.72:35,0,117	0/1:24,0:23:15.24:15,0,69	0/0:35,0:34:28.45:0,28,315	0/1:30,0:26:62.27:62,0,412	0/1:27,0:27:19.12:19,0,146	0/1:42,1:42:99:170,0,707	0/0:25,0:25:9.03:0,9,117	0/1:24,0:24:19.34:19,0,108	0/1:21,1:22:21.38:21,0,253	0/1:25,0:25:4.57:5,0,97	0/0:27,0:27:5.22:0,5,77	1/1:13,0:13:4.97:48,5,0	0/0:20,0:20:29.94:0,30,421	0/1:10,1:11:47.79:48,0,176	0/1:13,0:13:1.12:1,0,231	0/1:31,0:31:51.40:51,0,79	0/0:19,0:17:24.02:0,24,264	0/1:33,1:34:44.48:111,0,44	1/1:41,0:41:1.33:219,1,0	0/0:26,0:27:20.61:0,21,286	1/1:46,0:48:45.38:366,45,0	0/1:38,0:38:99:239,0,473	0/1:19,1:19:53.94:54,0,297	0/1:6,0:6:46.86:47,0,69
chr10	66114852	.	AC	A	1090.13	PASS	AB=0.957;AC=17;AF=0.304;AN=56;BaseQRankSum=9.906;DP=692;FS=103.066;HRun=1;HaplotypeScore=196.0525;InbreedingCoeff=-0.1476;MQ=32.53;MQ0=6;MQRankSum=-6.878;QD=2.69;ReadPosRankSum=-0.283;VQSLOD=-0.2118;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:13.26:0,13,216	0/0:13,0:13:5.21:0,5,138	0/0:8,0:2:3.01:0,3,38	0/0:14,0:6:11.70:0,12,152	0/1:30,2:32:25.27:25,0,85	0/0:24,0:23:12.96:0,13,112	0/0:34,0:33:23.37:0,23,295	0/1:29,1:26:21.55:22,0,384	0/1:27,0:27:21.63:22,0,159	0/1:40,2:41:99:131,0,694	0/0:24,1:25:8.82:0,9,114	0/0:24,0:24:7.60:0,8,117	0/0:20,1:21:2.20:0,2,229	0/1:23,2:25:23.46:23,0,99	0/0:26,1:27:1.08:0,1,59	0/1:11,1:13:3.51:47,0,4	0/0:20,0:20:30.57:0,31,421	0/1:10,0:10:12.21:12,0,157	0/1:12,1:13:19.81:20,0,234	0/1:31,0:31:43.48:43,0,69	0/0:18,0:16:21.49:0,21,226	0/1:32,1:33:24.45:72,0,24	1/1:40,0:40:20.88:120,21,0	0/0:25,2:27:23.29:0,23,292	1/1:37,11:48:59.21:405,59,0	0/1:32,5:37:99:261,0,466	0/1:17,1:17:28.51:29,0,268	0/1:6,0:6:21.08:21,0,75
chr10	66114853	.	CA	C	1317.17	PASS	AB=0.873;AC=21;AF=0.389;AN=54;BaseQRankSum=9.839;DP=612;FS=95.929;HRun=1;HaplotypeScore=169.5468;InbreedingCoeff=-0.2952;MQ=32.86;MQ0=6;MQRankSum=-6.528;QD=2.97;ReadPosRankSum=3.508;VQSLOD=-0.5526;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:30:25.07:25,0,197	0/1:9,1:10:7.89:8,0,112	./.	0/0:13,0:5:12.03:0,12,152	0/1:25,4:29:64.39:64,0,66	0/1:18,0:17:13.59:14,0,71	0/0:30,2:31:23.56:0,24,235	0/1:23,1:20:52.44:52,0,331	0/1:21,4:25:27.67:28,0,129	0/1:28,10:37:99:300,0,649	0/0:14,7:21:9.03:0,9,117	0/1:18,2:20:2.38:2,0,103	0/1:18,2:20:28.19:28,0,220	0/1:16,2:18:3.72:4,0,94	0/0:24,1:25:4.75:0,5,58	0/1:11,2:13:8.30:18,0,8	0/0:17,0:17:30.10:0,30,420	0/1:7,1:8:63.30:63,0,117	0/0:10,0:10:12.80:0,13,250	0/1:19,8:27:49.42:49,0,79	0/0:18,0:16:18.05:0,18,207	0/1:19,10:29:42.32:53,0,42	1/1:22,14:36:14.41:104,14,0	0/0:26,0:26:21.05:0,21,272	1/1:33,10:43:43.94:277,44,0	0/1:26,6:32:99:298,0,475	0/1:16,1:16:32.88:33,0,256	0/1:3,3:6:57.09:57,0,67
chr10	66114860	.	A	ATG	556.60	PASS	AB=0.992;AC=10;AF=0.185;AN=54;BaseQRankSum=0.484;DP=530;FS=19.132;HRun=0;HaplotypeScore=193.7083;InbreedingCoeff=-0.0896;MQ=30.99;MQ0=4;MQRankSum=-1.993;QD=3.44;ReadPosRankSum=3.780;VQSLOD=1.5360;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:13.54:0,14,176	0/0:9,0:9:6.96:0,7,86	./.	0/0:7,0:2:6.02:0,6,84	0/0:24,0:24:5.77:0,6,32	0/0:17,0:16:1.12:0,1,3	0/0:26,0:25:7.05:0,7,45	0/1:12,1:11:99:106,0,129	1/1:11,8:22:6.33:89,6,0	0/1:29,0:30:99:307,0,176	0/0:17,0:17:1.10:0,1,37	0/0:18,0:18:5.32:0,5,13	0/1:19,0:19:11.35:11,0,47	0/0:17,0:17:5.60:0,6,31	0/0:22,0:22:1.33:0,1,4	0/0:12,0:12:2.11:0,2,5	0/1:16,0:16:13.16:13,0,176	0/0:7,0:7:12.74:0,13,65	0/1:8,0:8:37.37:72,0,37	0/0:25,0:25:6.90:0,7,58	0/0:14,0:12:6.57:0,7,30	0/0:27,0:27:7.50:0,7,21	0/0:35,0:35:13.02:0,13,42	0/0:21,0:21:5.31:0,5,85	0/0:42,0:42:22.25:0,22,72	0/1:30,0:30:27.66:28,0,295	0/1:16,0:15:31.56:32,0,82	0/1:6,0:6:12.34:31,0,12
chr10	66114866	.	A	AT	81.90	PASS	AC=12;AF=0.600;AN=20;DP=156;FS=0.000;HRun=0;HaplotypeScore=31.6321;InbreedingCoeff=0.3583;MQ=32.02;MQ0=1;QD=2.27;VQSLOD=1.4218;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	./.	./.	0/0:3,6:11:0:0,0,0	./.	./.	0/0:2,0:2:0:0,0,0	./.	./.	1/1:2,8:10:1.55:4,2,0	./.	./.	./.	1/1:1,4:5:0.47:1,0,0	./.	1/1:0,4:5:6.73:39,7,0	./.	0/0:3,7:11:0.47:0,0,1	0/0:0,3:4:0:0,0,0	./.	./.	./.	1/1:2,6:9:12.19:71,12,0	1/1:1,4:4:3.84:21,4,0	1/1:0,2:2:3.27:14,3,0
chr10	66126975	.	C	CCA	1048.76	PASS	AB=0.916;AC=18;AF=0.321;AN=56;BaseQRankSum=3.662;DP=393;FS=16.272;HRun=0;HaplotypeScore=198.6981;InbreedingCoeff=-0.3799;MQ=54.68;MQ0=14;MQRankSum=-4.333;QD=4.64;ReadPosRankSum=4.268;VQSLOD=1.1824;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:16,2:18:87.05:87,0,93	0/1:7,0:7:0.43:0,0,82	0/0:21,0:10:24.14:0,24,283	0/0:22,0:15:6.32:0,6,149	0/0:13,1:12:2.98:0,3,21	0/1:18,2:19:34.25:34,0,289	0/0:20,1:22:0.35:0,0,136	0/0:12,2:10:20.26:0,20,208	1/1:11,2:14:10.01:89,10,0	0/1:20,1:20:93.26:93,0,270	0/1:10,1:11:36.50:36,0,50	0/1:13,5:18:90.78:297,0,91	0/1:8,0:7:30.85:31,0,73	0/0:9,0:8:8.51:0,9,78	0/1:16,0:16:20.85:21,0,56	0/1:7,1:8:63.58:74,0,64	0/0:6,0:6:4.13:0,4,68	0/1:11,1:12:38.98:39,0,216	0/1:14,2:15:99:127,0,153	0/1:10,0:9:7.80:8,0,108	0/0:27,0:25:20.97:0,21,230	0/0:14,3:17:0.34:0,0,69	0/1:6,3:9:0.98:1,0,21	0/1:7,0:7:17.86:18,0,87	0/0:11,0:10:5.76:0,6,30	0/1:18,4:22:99:199,0,305	0/0:4,0:4:3.01:0,3,36	0/1:8,1:9:39.96:40,0,93
chr10	66127321	.	AAGGAGG	A	965.97	PASS	AB=0.588;AC=3;AF=0.054;AN=56;BaseQRankSum=3.142;DP=687;FS=10.469;HRun=0;HaplotypeScore=154.7351;InbreedingCoeff=0.3609;MQ=66.53;MQ0=0;MQRankSum=-5.431;QD=33.31;ReadPosRankSum=-2.223;VQSLOD=2.4208;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,117,3535	0/0:7,0:7:18.06:0,18,504	0/0:24,0:20:39.01:0,39,1093	0/0:21,0:12:23.83:0,24,537	0/0:21,0:21:57.18:0,57,1768	0/0:28,0:28:48.16:0,48,1380	0/0:25,0:25:36.11:0,36,996	1/1:4,15:19:0.11:753,0,0	0/0:30,0:30:89.12:0,89,2555	0/0:41,0:41:99:0,111,3491	0/0:19,0:19:57.17:0,57,1886	0/0:26,0:26:36.07:0,36,968	0/0:26,0:26:75.24:0,75,2426	0/0:23,0:23:27.09:0,27,850	0/0:42,0:42:45.12:0,45,1309	0/0:31,0:31:66.22:0,66,1930	0/0:30,0:30:89.35:0,89,2545	0/1:3,7:10:99:302,0,187	0/0:16,0:15:36.04:0,36,1009	0/0:21,0:21:60.20:0,60,1819	0/0:25,0:25:45.14:0,45,1305	0/0:24,0:24:38.99:0,39,1288	0/0:10,0:10:30.09:0,30,873	0/0:33,0:33:93.29:0,93,2963	0/0:22,0:22:24.08:0,24,797	0/0:35,0:35:99:0,101,2733	0/0:31,0:31:45.15:0,45,1302	0/0:7,0:7:12.04:0,12,421
chr10	66127344	.	A	AGAGGAAGAGGAG	12200.80	PASS	AB=0.799;AC=38;AF=0.679;AN=56;BaseQRankSum=1.323;DP=758;FS=0.000;HRun=0;HaplotypeScore=196.0362;InbreedingCoeff=0.6032;MQ=55.38;MQ0=7;MQRankSum=-5.742;QD=21.15;ReadPosRankSum=-1.612;VQSLOD=3.6772;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:77.82:0,78,2107	1/1:4,0:4:3.01:94,3,0	0/0:26,0:14:9.03:0,9,196	0/0:20,0:10:9.03:0,9,241	0/0:24,0:24:54.17:0,54,1426	1/1:12,12:29:12.04:482,12,0	1/1:27,0:27:30.08:517,30,0	1/1:32,0:31:56.94:586,57,0	1/1:25,2:27:60.10:1599,60,0	0/1:40,0:40:0.82:693,0,1	1/1:22,0:22:12.97:386,13,0	1/1:8,18:31:9.03:530,9,0	0/0:30,0:29:60.19:0,60,1353	1/1:7,16:27:12.04:622,12,0	1/1:8,31:44:5.79:292,6,0	1/1:12,15:37:12.04:703,12,0	1/1:29,0:29:12.91:929,13,0	0/1:12,0:12:56.74:57,0,313	1/1:24,0:21:29.97:603,30,0	1/1:18,0:18:21:409,21,0	0/1:14,16:40:68.28:214,0,68	1/1:6,15:27:27.03:442,27,0	0/0:11,0:11:24.08:0,24,680	0/0:33,0:33:75.23:0,75,2209	0/1:9,15:28:4.87:105,0,5	1/1:11,26:39:78.24:2387,78,0	1/1:6,16:24:9.03:375,9,0	1/1:4,7:13:3.01:177,3,0
chr10	66127365	.	GGAA	G	2162.50	PASS	AB=0.913;AC=15;AF=0.268;AN=56;BaseQRankSum=7.182;DP=680;FS=20.000;HRun=0;HaplotypeScore=124.2110;InbreedingCoeff=-0.3621;MQ=51.26;MQ0=10;MQRankSum=-2.672;QD=5.38;ReadPosRankSum=-1.724;VQSLOD=1.2456;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:88.80:0,89,2008	0/0:1,1:2:3.01:0,3,69	0/0:18,0:6:15.05:0,15,211	0/0:16,0:7:18.03:0,18,283	0/0:25,0:25:69.18:0,69,1348	0/0:25,0:24:9.96:0,10,508	0/1:17,17:34:99:123,0,1024	0/1:35,2:36:75.64:302,0,76	0/1:26,7:33:99:428,0,539	0/1:35,0:35:86.33:86,0,432	0/1:19,0:18:45.49:45,0,138	0/0:21,0:21:17.99:0,18,332	0/0:27,0:26:78.21:0,78,1544	0/1:22,0:22:3.44:3,0,405	0/1:33,0:33:39.25:39,0,381	0/1:29,0:29:9.80:10,0,332	0/1:26,2:28:99:168,0,905	0/0:9,0:9:21.24:0,21,328	0/1:16,7:21:99:174,0,538	0/1:3,11:14:78.16:223,0,78	0/0:37,0:36:21.43:0,21,582	0/1:23,0:23:99:108,0,314	0/0:12,0:12:36.11:0,36,726	0/0:32,0:32:79.30:0,79,1973	0/1:23,0:22:5.44:5,0,230	0/1:30,0:30:99:550,0,711	0/1:19,0:19:48.70:49,0,203	0/0:15,0:14:18.04:0,18,270
chr10	66127383	.	A	AGAG	1445.66	PASS	AB=1.000;AC=6;AF=0.107;AN=56;BaseQRankSum=4.877;DP=652;FS=5.228;HRun=0;HaplotypeScore=136.8841;InbreedingCoeff=0.1949;MQ=58.47;MQ0=11;MQRankSum=-3.782;QD=11.75;ReadPosRankSum=-2.159;VQSLOD=2.9810;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:73.06:0,73,1009	0/0:5,0:5:5.98:0,6,81	0/0:19,0:11:21.84:0,22,296	0/0:12,0:8:14.47:0,14,213	0/0:22,0:22:57.19:0,57,818	0/0:25,0:23:28.91:0,29,427	0/0:36,0:36:72.16:0,72,988	0/0:34,0:33:45.82:0,46,580	1/1:18,15:33:81.20:1479,81,0	0/1:35,0:35:30.20:30,0,200	0/1:20,0:19:9.77:10,0,111	0/0:18,0:18:26.94:0,27,336	0/0:24,0:23:54.18:0,54,776	0/0:20,0:20:5.48:0,5,326	0/1:25,0:25:2.93:3,0,338	0/0:30,0:30:18.71:0,19,458	0/0:30,0:30:44.96:0,45,836	0/1:10,0:10:31.42:46,0,31	0/0:19,0:17:23.99:0,24,316	0/0:13,0:13:18.03:0,18,240	0/0:37,0:36:50.97:0,51,700	0/0:19,0:19:21.07:0,21,281	0/0:14,0:14:33.09:0,33,454	0/0:30,0:30:75.25:0,75,1070	0/0:22,0:21:0.04:0,0,272	0/0:28,0:28:22.45:0,22,688	0/0:16,0:16:4.78:0,5,214	0/0:20,0:19:30.08:0,30,413
chr10	66127449	.	C	CT	443.51	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.147;DP=620;FS=4.838;HRun=1;HaplotypeScore=75.4470;InbreedingCoeff=0.9617;MQ=86.98;MQ0=0;MQRankSum=-1.769;QD=21.12;ReadPosRankSum=-0.300;VQSLOD=3.5604;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:93.30:0,93,1204	0/0:10,0:10:24.05:0,24,292	0/0:21,0:21:59.96:0,60,669	0/0:24,0:24:64.11:0,64,711	0/0:12,0:12:33.09:0,33,402	0/0:20,0:20:57.18:0,57,735	0/0:35,0:35:93.30:0,93,1203	0/0:24,0:24:72.23:0,72,931	0/0:38,0:38:99:0,108,1355	1/1:6,8:14:17.99:314,18,0	1/1:0,7:7:21.02:248,21,0	0/0:26,0:26:78.21:0,78,990	0/0:25,0:25:69.22:0,69,881	0/0:29,0:29:87.23:0,87,1106	0/0:30,0:29:90.28:0,90,1152	0/0:32,0:32:93.23:0,93,1170	0/0:33,0:33:87.25:0,87,1103	0/0:11,0:11:30.07:0,30,372	0/0:19,0:19:54.08:0,54,614	0/0:21,0:21:63.17:0,63,778	0/0:57,0:57:99:0,147,1841	0/0:13,0:13:33.10:0,33,415	0/0:3,0:3:9.03:0,9,117	0/0:24,0:24:69.22:0,69,893	0/0:10,0:10:24.08:0,24,307	0/0:11,0:11:30.09:0,30,374	0/0:22,0:22:66.21:0,66,853	0/0:18,0:18:51.14:0,51,638
chr10	66128276	.	C	CAGAG	1456.73	PASS	AB=1.000;AC=20;AF=0.357;AN=56;BaseQRankSum=8.015;DP=565;FS=20.579;HRun=0;HaplotypeScore=124.9309;InbreedingCoeff=-0.2783;MQ=52.34;MQ0=8;MQRankSum=-2.476;QD=4.16;ReadPosRankSum=-0.645;VQSLOD=1.0675;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:75.20:0,75,945	0/1:16,0:16:81.36:81,0,145	0/0:12,0:7:15.47:0,15,169	0/0:16,0:9:23.98:0,24,293	0/0:16,0:16:5.92:0,6,50	0/1:19,0:19:79.58:153,0,80	0/0:25,7:32:40.53:0,41,685	0/1:23,0:23:35.22:35,0,481	0/1:11,0:11:16:65,0,16	0/1:17,0:17:99:151,0,316	0/1:7,0:6:11.65:12,0,110	0/1:22,0:22:99:138,0,248	0/0:14,0:13:32.23:0,32,432	0/1:27,0:26:99:223,0,320	0/1:18,0:18:15.95:56,0,16	1/1:16,0:16:5.96:75,6,0	1/1:20,0:20:9.39:103,9,0	0/1:13,0:13:22.15:22,0,29	0/1:22,0:22:99:191,0,389	0/1:21,0:21:80.24:80,0,308	0/0:31,0:31:18.05:0,18,257	0/1:27,0:24:68.32:68,0,346	0/0:18,0:16:36.01:0,36,528	0/0:21,0:21:44.40:0,44,728	0/0:21,0:18:21.05:0,21,282	0/1:25,0:23:99:129,0,505	0/1:30,0:30:27.61:28,0,374	0/1:16,0:13:12.82:13,0,294
chr10	66128278	.	C	CACAGAGAG	6579.22	PASS	AB=0.811;AC=34;AF=0.607;AN=56;BaseQRankSum=-2.460;DP=600;FS=0.000;HRun=0;HaplotypeScore=151.0931;InbreedingCoeff=0.2050;MQ=50.94;MQ0=7;MQRankSum=-2.153;QD=14.15;ReadPosRankSum=-0.876;VQSLOD=3.7718;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:33:20:0,20,512	0/1:8,0:16:22.18:216,0,22	0/1:12,0:7:4.73:5,0,13	0/0:15,0:8:12.94:0,13,161	0/1:7,0:17:3.97:4,0,47	0/1:4,13:21:21:516,0,21	1/1:31,0:30:7.34:374,7,0	1/1:30,0:30:47.68:667,48,0	1/1:13,0:13:9.02:129,9,0	0/1:17,0:17:99:270,0,139	0/1:10,0:9:33.62:34,0,80	1/1:12,0:22:7.97:317,8,0	0/0:10,0:13:32.24:0,32,384	1/1:24,1:27:26.15:735,26,0	1/1:2,10:18:6.49:205,6,0	1/1:1,11:18:6.02:196,6,0	1/1:7,0:22:9.01:168,9,0	1/1:13,0:13:5.01:138,5,0	1/1:17,0:27:4.86:705,5,0	0/1:20,0:21:29.39:299,0,29	0/0:10,16:34:17.59:0,18,159	0/1:27,0:24:47.12:345,0,47	0/0:17,0:16:38.99:0,39,585	0/0:17,0:21:45:0,45,772	1/1:16,0:22:19.97:161,20,0	0/1:10,0:26:82.11:524,0,82	0/1:18,0:31:17.43:244,0,17	1/1:16,0:14:31.87:328,32,0
chr10	66128314	.	G	GAGAGAT	4673.29	PASS	AB=1.000;AC=22;AF=0.393;AN=56;BaseQRankSum=5.181;DP=643;FS=11.532;HRun=0;HaplotypeScore=155.4889;InbreedingCoeff=-0.0643;MQ=68.12;MQ0=6;MQRankSum=-3.968;QD=11.54;ReadPosRankSum=-0.770;VQSLOD=3.4837;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:61.90:0,62,665	0/1:14,0:14:86.01:94,0,86	0/0:26,0:19:44.32:0,44,445	0/0:37,0:28:52.82:0,53,576	0/0:24,0:24:34.09:0,34,231	0/1:20,0:20:99:242,0,112	0/0:23,0:22:4.57:0,5,151	1/1:40,0:40:99:1062,106,0	0/1:18,0:18:21.63:22,0,106	1/1:2,17:20:59.97:753,60,0	1/1:15,0:14:20.36:219,20,0	0/1:25,0:25:99:142,0,170	0/0:12,0:11:30.04:0,30,437	0/1:22,0:21:78.84:385,0,79	0/1:19,0:19:99:117,0,169	0/1:20,0:19:99:120,0,140	0/1:19,0:19:76.87:77,0,121	1/1:16,0:16:38.83:389,39,0	0/1:30,0:29:99:291,0,398	0/1:24,0:23:76.56:77,0,229	0/0:24,0:24:26.93:0,27,279	0/1:34,0:31:65.29:65,0,400	0/0:21,0:21:52.26:0,52,756	0/0:21,0:21:51.01:0,51,801	0/0:19,0:16:20.96:0,21,172	0/1:27,0:26:99:360,0,219	0/1:28,0:26:99:200,0,123	0/1:14,0:12:57.96:58,0,117
chr10	66128503	.	GGT	G	902.22	PASS	AB=0.941;AC=29;AF=0.630;AN=46;BaseQRankSum=2.044;DP=546;FS=3.078;HRun=0;HaplotypeScore=76.2226;InbreedingCoeff=-0.1332;MQ=60.27;MQ0=15;MQRankSum=-0.225;QD=2.23;ReadPosRankSum=0.291;VQSLOD=1.1686;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:36,1:35:2.36:2,0,40	0/1:8,1:9:11.89:26,0,12	./.	./.	0/0:18,0:18:2.68:0,3,11	1/1:9,1:10:2.94:30,3,0	1/1:20,0:18:2.98:21,3,0	./.	0/1:12,1:13:66.58:67,0,77	0/1:15,0:14:0:0,0,0	./.	0/0:30,0:28:17.99:0,18,203	0/1:12,2:13:22.91:23,0,36	1/1:12,2:12:9.02:95,9,0	1/1:20,4:21:12.03:127,12,0	0/1:20,7:24:46.06:189,0,46	1/1:26,2:26:15.03:156,15,0	0/1:21,0:19:28.92:29,0,82	0/1:28,0:26:15.73:25,0,16	1/1:6,0:6:1.82:5,2,0	0/1:54,0:45:17.31:17,0,29	1/1:11,3:14:7.47:75,7,0	0/1:13,0:13:0.65:1,0,19	0/1:26,0:26:0.04:0,0,156	1/1:9,0:8:1.55:4,2,0	./.	0/1:12,2:13:22.88:70,0,23	0/1:7,1:8:10.46:74,0,10
chr10	66128622	.	CTG	C	489.54	PASS	AB=0.957;AC=3;AF=0.056;AN=54;BaseQRankSum=3.071;DP=897;FS=13.633;HRun=0;HaplotypeScore=134.6616;InbreedingCoeff=0.5166;MQ=44.51;MQ0=85;MQRankSum=-3.738;QD=8.74;ReadPosRankSum=-3.698;VQSLOD=1.5462;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,2:32:40.13:0,40,963	0/0:11,0:11:24.08:0,24,393	0/0:65,0:3:9.03:0,9,127	0/0:80,0:6:18.01:0,18,226	0/0:22,0:20:30.10:0,30,498	0/0:23,0:21:33.10:0,33,513	0/0:45,0:35:25.16:0,25,923	1/1:15,19:28:17.21:578,17,0	0/0:5,0:5:3:0,3,25	0/0:3,0:2:1.55:0,2,4	./.	0/0:49,0:46:8.81:0,9,963	0/0:30,0:29:75.23:0,75,1191	0/0:39,0:39:63.17:0,63,994	0/0:49,0:44:82.94:0,83,1318	0/0:30,0:28:60.20:0,60,988	0/0:35,0:28:44.26:0,44,948	0/0:29,0:26:27.08:0,27,403	0/0:23,0:16:17.28:0,17,430	0/0:22,0:19:36.10:0,36,523	0/0:76,1:65:23.93:0,24,1420	0/0:26,1:23:31.41:0,31,664	0/0:21,0:20:54.17:0,54,871	0/0:48,0:47:99:0,102,1622	0/0:16,1:14:24.07:0,24,377	0/0:35,1:28:67.06:0,67,1027	0/1:21,1:21:7.80:8,0,515	0/0:15,0:14:14.63:0,15,377
chr10	66128636	.	GCA	G	467.76	PASS	AB=0.926;AC=10;AF=0.185;AN=54;BaseQRankSum=4.892;DP=832;FS=51.318;HRun=0;HaplotypeScore=123.6828;InbreedingCoeff=0.0024;MQ=44.00;MQ0=70;MQRankSum=-3.569;QD=2.27;ReadPosRankSum=0.066;VQSLOD=0.6251;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,2:33:35.88:0,36,1051	0/0:8,0:8:20.56:0,21,210	0/0:71,1:4:11.65:0,12,100	0/0:83,1:8:23.92:0,24,274	0/1:25,0:23:4.90:5,0,653	0/0:14,0:14:23.71:0,24,267	0/0:40,0:35:48.46:0,48,635	0/1:30,3:29:76.83:77,0,146	0/0:2,0:2:0:0,0,0	1/1:0,2:2:6.02:79,6,0	./.	0/1:38,4:39:99:190,0,706	0/0:29,1:29:76.96:0,77,1199	0/0:32,3:35:59.28:0,59,749	0/0:39,1:38:20.48:0,20,780	0/0:25,1:25:54.60:0,55,649	0/0:28,0:24:49.47:0,49,516	0/1:22,2:21:13.86:14,0,263	0/1:13,4:14:99:135,0,347	0/0:17,0:16:10.61:0,11,305	0/0:71,3:63:45.09:0,45,916	0/0:19,3:20:3.85:0,4,372	0/0:25,1:25:17.74:0,18,946	0/0:54,0:51:99:0,123,2115	0/0:14,0:12:23.12:0,23,227	0/1:30,1:25:39.22:39,0,603	0/1:18,1:19:39.19:39,0,347	0/1:12,1:12:27.25:27,0,247
chr10	66128637	.	CAT	C	881.23	PASS	AB=0.990;AC=18;AF=0.333;AN=54;BaseQRankSum=11.476;DP=831;FS=23.030;HRun=0;HaplotypeScore=119.3033;InbreedingCoeff=-0.3538;MQ=44.01;MQ0=70;MQRankSum=-0.854;QD=1.99;ReadPosRankSum=9.125;VQSLOD=0.0389;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:33:42.49:0,42,878	0/1:6,0:6:13.27:13,0,56	0/0:71,0:4:11.98:0,12,102	0/0:85,0:8:23.93:0,24,213	0/0:26,0:24:22:0,22,688	0/1:14,0:14:32.19:32,0,92	0/1:40,0:35:14.65:15,0,248	0/0:31,0:27:22.15:0,22,329	0/0:2,0:2:0:0,0,0	1/1:2,0:2:5.82:32,6,0	./.	0/1:39,3:39:99:215,0,284	0/0:30,0:29:70.28:0,70,907	0/1:35,0:35:5.91:6,0,282	0/1:39,0:37:87.45:87,0,264	0/1:26,0:25:30.26:30,0,220	0/1:28,0:24:80.24:80,0,155	0/0:24,0:21:4:0,4,122	0/1:17,0:14:92.09:92,0,132	0/1:18,0:17:23.64:24,0,136	0/1:76,0:64:91.01:91,0,407	0/1:21,1:20:60.07:60,0,119	0/0:27,0:26:32.78:0,33,795	0/0:53,0:51:99:0,123,1834	0/1:15,0:13:25.79:26,0,55	0/1:30,0:25:99:121,0,259	0/1:18,1:19:79.55:80,0,133	0/1:13,0:12:31.59:32,0,115
chr10	66128638	.	ATG	A	3811.73	PASS	AB=0.730;AC=31;AF=0.574;AN=54;BaseQRankSum=6.340;DP=831;FS=6.466;HRun=0;HaplotypeScore=111.5616;InbreedingCoeff=0.4579;MQ=44.00;MQ0=68;MQRankSum=0.168;QD=7.75;ReadPosRankSum=5.162;VQSLOD=2.4154;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,3:35:11.71:0,12,557	1/1:3,3:6:9.03:105,9,0	0/0:73,0:5:3.90:0,4,40	0/0:85,0:8:6.02:0,6,67	0/0:24,2:24:36.54:0,37,513	1/1:10,4:14:12.03:140,12,0	1/1:24,14:35:17.89:189,18,0	0/1:26,0:27:3.45:39,0,3	0/0:2,0:2:0:0,0,0	0/0:2,0:2:3.78:0,4,12	./.	1/1:28,13:38:34.37:359,34,0	0/0:29,0:29:27.98:0,28,514	1/1:21,13:34:2.51:209,3,0	1/1:26,12:36:38.55:415,39,0	1/1:18,8:25:23.98:280,24,0	1/1:17,10:24:37.17:383,37,0	0/1:15,0:22:8.19:8,0,11	1/1:15,2:14:9.53:128,10,0	0/1:10,6:17:29.09:138,0,29	0/1:42,32:64:66.01:395,0,66	1/1:17,5:20:23.55:245,24,0	0/0:26,1:26:2.47:0,2,498	0/0:53,0:51:75.24:0,75,1149	1/1:9,6:13:15.03:172,15,0	0/1:16,12:25:28.89:319,0,29	1/1:12,5:19:5.33:182,5,0	1/1:10,2:12:11.83:106,12,0
chr10	66129019	.	AAACAACAAC	A	2752.90	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=10.231;DP=706;FS=2.850;HRun=0;HaplotypeScore=186.9676;InbreedingCoeff=0.9958;MQ=61.27;MQ0=0;MQRankSum=-5.917;QD=64.02;ReadPosRankSum=-1.022;VQSLOD=3.5567;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,111,4501	0/0:16,0:16:48.15:0,48,1904	0/0:32,0:25:75.21:0,75,2499	0/0:28,0:21:60.01:0,60,1992	0/0:33,0:33:93.21:0,93,3788	0/0:17,0:17:48.16:0,48,2104	0/0:24,0:24:63.19:0,63,2205	0/0:35,0:35:96.29:0,96,3682	0/0:23,0:23:69.21:0,69,2989	1/1:0,27:26:78.18:2023,78,0	1/1:1,15:16:42.01:852,42,0	0/0:26,0:26:78.25:0,78,3347	0/0:25,0:25:63.15:0,63,2655	0/0:27,0:27:72.18:0,72,2601	0/0:34,0:34:99:0,99,4403	0/0:18,0:18:51.17:0,51,2161	0/0:24,0:24:69.16:0,69,2625	0/0:24,0:24:72.09:0,72,2468	0/0:20,0:20:57.18:0,57,2200	0/0:32,0:32:90.26:0,90,3937	0/0:22,0:22:63.20:0,63,2557	0/0:24,0:24:69.08:0,69,2491	0/0:17,0:17:51.09:0,51,1648	0/0:27,0:27:78.23:0,78,2986	0/0:27,0:27:75.16:0,75,2865	0/0:36,0:36:47.37:0,47,3947	0/0:28,0:27:84.15:0,84,3569	0/0:6,0:6:18.06:0,18,866
chr10	66129514	.	T	TAAC	9670.99	PASS	AB=1.000;AC=40;AF=0.714;AN=56;BaseQRankSum=-10.827;DP=471;FS=2.089;HRun=0;HaplotypeScore=58.1771;InbreedingCoeff=0.8066;MQ=60.31;MQ0=1;MQRankSum=0.102;QD=28.96;ReadPosRankSum=2.616;VQSLOD=4.9548;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:39.13:0,39,780	1/1:2,11:13:30.02:569,30,0	0/0:12,0:9:17.96:0,18,179	0/1:3,0:3:0.83:1,0,21	0/0:22,0:22:48.08:0,48,598	1/1:4,11:15:21.07:430,21,0	1/1:1,7:9:12.04:246,12,0	0/0:31,0:31:60.07:0,60,619	1/1:3,10:13:15.05:307,15,0	1/1:15,0:15:14.98:161,15,0	1/1:10,0:10:5.93:69,6,0	1/1:4,20:24:36.12:736,36,0	0/0:12,0:13:27.03:0,27,348	1/1:4,6:10:9.03:184,9,0	1/1:4,17:22:27.09:553,27,0	1/1:4,14:18:33.11:675,33,0	1/1:5,18:23:30.10:614,30,0	0/1:15,0:15:30.96:31,0,121	1/1:7,7:12:20.94:346,21,0	1/1:9,21:30:62.89:1073,63,0	1/1:3,3:6:6.02:123,6,0	1/1:2,5:7:14.86:217,15,0	0/0:20,0:20:48.10:0,48,603	0/0:11,0:11:20.93:0,21,238	1/1:4,19:23:39.13:798,39,0	1/1:4,24:28:75.21:1374,75,0	1/1:7,11:18:24.08:491,24,0	1/1:3,15:18:13.77:675,14,0
chr10	66129529	.	C	CAACAACAACAATAATAAT	1759.08	PASS	AB=0.625;AC=5;AF=0.089;AN=56;BaseQRankSum=-3.507;DP=483;FS=2.990;HRun=0;HaplotypeScore=214.4265;InbreedingCoeff=0.6679;MQ=60.48;MQ0=3;MQRankSum=-0.757;QD=36.65;ReadPosRankSum=-3.303;VQSLOD=2.4760;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:72.24:0,72,3150	0/0:12,0:12:13.11:0,13,643	0/0:12,0:10:22.88:0,23,478	0/0:4,0:4:8.53:0,9,135	0/0:23,0:23:63.20:0,63,2337	0/0:15,0:15:33.11:0,33,804	0/0:11,0:11:21.06:0,21,439	0/0:35,0:35:93.90:0,94,2459	0/0:12,0:12:21.05:0,21,462	1/1:2,8:17:33.08:1280,33,0	1/1:0,5:11:5.93:261,6,0	0/0:24,0:24:48.15:0,48,1101	0/0:10,0:10:30.08:0,30,1293	0/0:9,0:9:12.04:0,12,292	0/0:21,0:21:22.40:0,22,767	0/0:17,0:17:39.13:0,39,956	0/0:25,0:25:47.72:0,48,914	0/1:8,0:20:99:339,0,415	0/0:19,0:15:39.10:0,39,834	0/0:26,0:26:71.99:0,72,1471	0/0:5,0:5:12.04:0,12,255	0/0:5,0:5:14.91:0,15,222	0/0:19,0:19:57.16:0,57,2156	0/0:11,0:11:30.06:0,30,962	0/0:22,0:22:48.15:0,48,1102	0/0:30,0:30:74.67:0,75,1706	0/0:19,0:18:41.92:0,42,912	0/0:22,0:22:54.18:0,54,1274
chr10	66129761	.	CT	C	549.66	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.227;DP=623;FS=1.819;HRun=6;HaplotypeScore=96.5449;InbreedingCoeff=0.9916;MQ=84.35;MQ0=0;MQRankSum=-0.854;QD=24.98;ReadPosRankSum=2.395;VQSLOD=3.5428;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,144,1890	0/0:9,0:9:27.09:0,27,355	0/0:20,1:21:50.94:0,51,585	0/0:18,0:18:18.95:0,19,497	0/0:21,0:21:54.18:0,54,711	0/0:16,0:16:48.15:0,48,618	0/0:26,0:26:78.25:0,78,1025	0/0:29,0:29:81.26:0,81,1065	0/0:19,0:19:48.16:0,48,629	0/0:26,0:26:75.23:0,75,970	0/0:13,0:13:39.13:0,39,513	0/0:12,0:12:36.11:0,36,459	0/0:14,0:14:39.12:0,39,501	0/0:20,0:20:60.17:0,60,760	0/0:26,0:26:78.25:0,78,1025	0/0:24,0:24:69.21:0,69,882	0/0:27,0:27:75.24:0,75,985	1/1:1,21:22:60.15:645,60,0	0/0:27,0:27:72.21:0,72,917	0/0:24,0:24:69.21:0,69,892	0/0:26,0:26:75.19:0,75,940	0/0:12,0:12:36.12:0,36,474	0/0:23,0:23:60.18:0,60,775	0/0:24,0:24:69.20:0,69,891	0/0:28,0:28:81.26:0,81,1064	0/0:27,0:27:81.26:0,81,1066	0/0:25,0:25:72.22:0,72,930	0/0:12,0:12:30.10:0,30,389
chr10	66130232	.	T	TTCG	9591.26	PASS	AB=0.613;AC=41;AF=0.732;AN=56;BaseQRankSum=7.069;DP=392;FS=15.561;HRun=0;HaplotypeScore=76.5151;InbreedingCoeff=0.8059;MQ=55.86;MQ0=6;MQRankSum=-10.628;QD=40.30;ReadPosRankSum=-2.255;VQSLOD=4.2674;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:33:96.33:0,96,1789	1/1:1,2:3:6.02:147,6,0	0/0:12,0:9:24.07:0,24,397	0/0:15,0:13:33.99:0,34,581	0/0:14,0:13:36.11:0,36,630	1/1:1,9:13:21.07:515,21,0	1/1:5,9:13:17.85:441,18,0	1/1:0,10:11:33.11:758,33,0	1/1:1,13:13:33.11:793,33,0	1/1:1,9:10:27.56:632,28,0	1/1:0,6:7:9.03:221,9,0	1/1:4,5:9:15.05:358,15,0	0/0:16,0:11:33.11:0,33,615	1/1:4,4:4:9.03:221,9,0	1/1:1,9:11:24.08:588,24,0	0/1:7,9:13:11.21:490,0,11	1/1:15,11:19:1.07:669,1,0	1/1:0,7:6:12.04:295,12,0	1/1:4,8:9:24.08:544,24,0	1/1:1,8:9:21.07:496,21,0	1/1:4,10:12:18.06:413,18,0	1/1:0,6:7:12.04:294,12,0	0/0:15,0:15:42.14:0,42,783	0/0:36,0:32:90.31:0,90,1666	1/1:1,8:8:15.05:368,15,0	1/1:0,8:9:30.08:663,30,0	1/1:5,8:10:24.08:536,24,0	1/1:0,2:2:6.02:148,6,0
chr10	66130256	.	TTA	T	388.07	PASS	AB=0.727;AC=8;AF=0.222;AN=36;BaseQRankSum=6.183;DP=395;FS=4.470;HRun=0;HaplotypeScore=73.1001;InbreedingCoeff=0.2278;MQ=39.63;MQ0=29;MQRankSum=-5.845;QD=4.36;ReadPosRankSum=3.104;VQSLOD=1.7731;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:33:78.27:0,78,1534	0/0:4,1:3:3.01:0,3,61	0/0:18,0:4:12.04:0,12,216	0/0:36,0:9:22.71:0,23,359	0/0:19,0:17:30.10:0,30,573	0/0:8,4:11:9.03:0,9,182	./.	./.	0/0:6,9:13:3.01:0,3,61	0/1:3,3:4:48.88:117,0,49	./.	./.	0/0:22,2:19:42.14:0,42,853	0/0:10,4:8:3:0,3,61	0/1:7,6:11:0:0,0,0	0/0:11,6:10:3.01:0,3,61	0/1:23,9:23:51.76:67,0,52	./.	0/1:10,4:5:45.80:148,0,46	./.	1/1:8,2:6:2.59:10,3,0	./.	0/0:11,0:10:27.09:0,27,531	0/0:40,0:36:99:0,99,1985	./.	./.	1/1:9,5:9:14.81:159,15,0	./.
chr10	66130425	.	ACTTGTTT	A	288.06	PASS	AC=6;AF=0.250;AN=24;BaseQRankSum=-0.750;DP=177;FS=16.042;HRun=0;HaplotypeScore=58.1728;InbreedingCoeff=0.5872;MQ=66.17;MQ0=15;MQRankSum=-2.416;QD=36.01;ReadPosRankSum=-1.770;VQSLOD=1.0372;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:12:33.11:0,33,1009	./.	0/0:56,0:15:33.70:0,34,532	0/0:62,0:15:31.59:0,32,503	0/0:13,0:13:39.13:0,39,1150	0/0:1,0:1:3.01:0,3,38	./.	./.	./.	1/1:0,2:2:3.01:64,3,0	1/1:2,3:5:12.04:293,12,0	./.	0/0:5,0:5:15.05:0,15,527	./.	./.	./.	./.	./.	0/0:3,0:1:3.01:0,3,48	./.	./.	1/1:1,0:1:3.01:30,3,0	0/0:1,0:1:3.01:0,3,89	0/0:4,0:3:6.02:0,6,194	./.	./.	./.	./.
chr10	66130560	.	CA	C	1122.90	PASS	AB=0.847;AC=28;AF=0.519;AN=54;BaseQRankSum=0.125;DP=416;FS=0.000;HRun=18;HaplotypeScore=74.0462;InbreedingCoeff=0.1614;MQ=45.44;MQ0=6;MQRankSum=3.522;QD=3.20;ReadPosRankSum=0.942;VQSLOD=-0.6750;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:26,4:32:15.13:15,0,198	0/0:5,0:5:5.98:0,6,45	./.	0/0:4,1:3:1.24:0,1,3	0/0:11,0:11:8.92:0,9,63	1/1:10,5:20:26.88:122,27,0	1/1:11,9:21:10.86:135,11,0	1/1:13,10:24:15.02:124,15,0	0/1:14,2:15:22.97:36,0,23	0/0:5,0:17:20.29:0,20,105	0/0:8,0:8:6.34:0,6,37	1/1:6,0:5:2.77:15,3,0	0/0:7,0:8:9.74:0,10,94	1/1:13,0:13:9.03:38,9,0	0/1:11,0:10:6.54:47,0,7	1/1:13,1:19:32.15:148,32,0	1/1:24,3:31:15.77:133,16,0	0/0:4,0:3:5.64:0,6,28	1/1:12,2:13:1.01:67,1,0	0/1:15,5:19:18.99:48,0,19	0/1:5,5:10:4.67:38,0,5	1/1:12,8:21:10.30:52,10,0	0/0:3,0:3:5.83:0,6,37	0/1:17,1:18:23.52:24,0,73	0/1:15,5:23:10.02:92,0,10	0/1:18,2:21:55.50:67,0,56	0/1:19,2:21:0.07:83,0,0	0/1:5,2:7:6.66:7,0,30
chr10	66132429	.	GAA	G	6889.87	PASS	AB=0.933;AC=41;AF=0.732;AN=56;BaseQRankSum=10.727;DP=578;FS=1.214;HRun=13;HaplotypeScore=119.3237;InbreedingCoeff=0.9178;MQ=62.46;MQ0=6;MQRankSum=-0.280;QD=18.42;ReadPosRankSum=5.701;VQSLOD=3.8562;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:45:99:0,112,1349	1/1:0,6:7:11.57:98,12,0	0/0:30,0:16:12.80:0,13,170	0/1:25,1:12:2.28:2,0,41	0/0:23,0:24:57.16:0,57,775	1/1:4,20:27:59.49:597,59,0	1/1:3,13:19:30.22:307,30,0	0/0:17,0:29:52:0,52,298	1/1:4,12:16:36.04:349,36,0	1/1:0,22:22:50.95:484,51,0	1/1:1,11:13:35.38:301,35,0	1/1:1,5:6:11.99:116,12,0	0/0:15,0:15:36.09:0,36,466	1/1:1,9:10:27.03:262,27,0	1/1:2,16:18:39.02:378,39,0	1/1:3,17:20:48.45:454,48,0	1/1:4,18:27:43.43:480,43,0	1/1:3,23:29:62.42:615,62,0	1/1:6,14:19:43.96:386,44,0	1/1:7,12:19:39.30:332,39,0	1/1:2,10:13:12.29:253,12,0	1/1:2,14:19:17.52:256,18,0	0/0:17,1:22:21.19:0,21,533	0/0:35,0:37:96.24:0,96,1249	1/1:2,11:13:26.93:250,27,0	1/1:1,12:14:29.96:341,30,0	1/1:5,14:21:44.21:451,44,0	1/1:1,9:12:14.69:178,15,0
chr10	66133032	.	AACCC	A	634.63	PASS	AB=0.884;AC=6;AF=0.107;AN=56;BaseQRankSum=-1.751;DP=498;FS=31.617;HRun=0;HaplotypeScore=310.6823;InbreedingCoeff=-0.1300;MQ=52.84;MQ0=0;MQRankSum=-1.188;QD=5.82;ReadPosRankSum=-5.003;VQSLOD=0.8736;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:24,2:26:80.29:80,0,326	0/0:6,0:6:15.01:0,15,135	0/0:11,0:11:7.01:0,7,120	0/1:12,0:12:44.03:44,0,65	0/0:14,0:14:22.19:0,22,199	0/0:22,0:22:53.65:0,54,485	0/0:15,0:14:33.05:0,33,314	0/0:21,0:20:59.48:0,59,422	0/0:36,0:36:83.89:0,84,753	0/0:15,0:15:44.50:0,44,341	0/0:7,0:7:12.02:0,12,120	0/0:27,0:27:61.06:0,61,719	0/0:21,0:21:49.18:0,49,439	0/0:20,0:20:48.02:0,48,464	0/0:42,0:42:99:0,106,950	0/0:25,0:25:53.73:0,54,475	0/1:17,4:21:99:146,0,247	0/1:5,1:6:47.80:48,0,75	0/0:10,0:10:29.70:0,30,210	0/0:11,0:10:26.97:0,27,243	0/1:15,7:22:99:400,0,105	0/0:11,0:11:27.04:0,27,262	0/0:7,0:7:9.02:0,9,91	0/1:20,2:22:40.39:40,0,166	0/0:10,0:10:23.97:0,24,221	0/0:28,0:28:83.64:0,84,646	0/0:26,0:26:74.99:0,75,691	0/0:4,0:4:11.98:0,12,98
chr10	66133337	.	T	TTTC	1237.04	PASS	AB=0.995;AC=12;AF=0.214;AN=56;BaseQRankSum=-0.309;DP=448;FS=47.634;HRun=0;HaplotypeScore=66.9933;InbreedingCoeff=0.2355;MQ=57.52;MQ0=8;MQRankSum=6.263;QD=7.45;ReadPosRankSum=7.413;VQSLOD=0.0673;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,107,1036	0/0:9,0:9:23.81:0,24,183	0/0:15,0:9:23.99:0,24,237	0/0:10,0:6:12.84:0,13,101	0/0:17,0:17:40.34:0,40,378	0/1:18,0:18:6.25:6,0,226	0/1:14,0:13:34.42:34,0,130	0/0:32,0:29:62.29:0,62,405	0/1:15,0:15:5.25:5,0,114	1/1:20,0:19:40.44:395,40,0	0/1:22,1:20:0.62:317,0,1	0/0:7,0:6:5.81:0,6,32	0/0:12,0:12:32.24:0,32,279	0/1:15,0:15:1.54:2,0,120	0/0:12,0:12:7.21:0,7,147	0/0:18,0:18:23.66:0,24,187	0/0:18,0:18:33.69:0,34,257	1/1:3,19:23:36.10:601,36,0	0/0:17,0:16:14.48:0,14,229	0/1:18,0:18:11.73:12,0,152	0/0:7,0:6:4.06:0,4,66	0/1:12,0:12:10.62:11,0,107	0/0:15,0:15:41.77:0,42,410	0/0:9,0:9:10.02:0,10,150	0/1:8,0:7:1.50:2,0,88	0/0:19,0:19:24.06:0,24,195	0/0:18,0:17:30.46:0,30,256	0/0:2,0:2:2.98:0,3,22
chr10	66133338	.	T	TTC	1095.89	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=-0.567;DP=450;FS=31.545;HRun=0;HaplotypeScore=59.7490;InbreedingCoeff=0.6882;MQ=57.55;MQ0=8;MQRankSum=5.869;QD=12.89;ReadPosRankSum=7.220;VQSLOD=0.9861;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,110,1055	0/0:9,0:9:23.85:0,24,185	0/0:15,0:9:23.98:0,24,228	0/0:10,0:6:13.99:0,14,106	0/0:17,0:17:44.08:0,44,386	0/0:18,0:18:29.06:0,29,264	0/0:14,0:13:26.51:0,27,185	0/0:31,0:28:66.43:0,66,446	0/0:15,0:15:24.11:0,24,166	1/1:3,17:19:44.77:473,45,0	1/1:10,13:21:18.98:393,19,0	0/0:7,0:6:8.84:0,9,55	0/0:12,0:12:35.15:0,35,297	0/0:15,0:15:18.58:0,19,162	0/0:12,0:12:24.79:0,25,173	0/0:18,0:18:27.12:0,27,219	0/0:18,0:18:36.01:0,36,276	1/1:22,1:23:36.07:367,36,0	0/0:17,0:16:31.54:0,32,272	0/1:18,0:18:6.34:6,0,144	0/0:7,0:6:4.28:0,4,67	0/0:12,0:12:27.50:0,27,154	0/0:15,0:15:41.82:0,42,401	0/0:9,0:9:10.24:0,10,153	0/0:9,0:8:0.66:0,1,91	0/0:19,0:19:27.86:0,28,220	0/0:18,0:17:30.73:0,31,251	0/0:3,0:3:2.98:0,3,22
chr10	66135878	.	T	TCACA	2501.36	PASS	AB=1.000;AC=39;AF=0.780;AN=50;BaseQRankSum=0.059;DP=544;FS=6.415;HRun=0;HaplotypeScore=126.7222;InbreedingCoeff=0.4286;MQ=66.00;MQ0=7;MQRankSum=-0.102;QD=6.41;ReadPosRankSum=-0.636;VQSLOD=2.2123;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:26:2.99:23,3,0	1/1:7,0:6:3.48:39,3,0	./.	./.	0/1:19,0:19:31.53:65,0,32	1/1:19,0:19:9.03:139,9,0	0/1:19,0:19:10.71:75,0,11	1/1:20,0:19:3.06:8,3,0	1/1:20,0:19:6.02:91,6,0	0/1:15,0:15:0.51:1,0,22	0/0:15,0:17:6:0,6,53	1/1:19,0:19:21.03:289,21,0	0/0:7,0:7:3:0,3,46	1/1:16,0:16:15.03:231,15,0	1/1:19,0:19:12.02:150,12,0	1/1:21,0:21:14.56:203,15,0	1/1:24,0:29:11.93:155,12,0	0/0:13,0:15:8.96:0,9,110	1/1:17,0:17:15.52:233,16,0	1/1:12,0:12:6:57,6,0	1/1:43,0:40:27.02:336,27,0	1/1:14,0:14:9.03:128,9,0	./.	0/0:38,0:38:14.79:0,15,175	1/1:12,0:12:5.88:53,6,0	1/1:19,0:18:13.74:164,14,0	1/1:11,5:18:8.99:145,9,0	1/1:4,0:4:3.01:65,3,0
chr10	66136638	.	G	GA	3483.74	PASS	AB=0.735;AC=33;AF=0.589;AN=56;BaseQRankSum=-5.839;DP=517;FS=0.996;HRun=13;HaplotypeScore=78.1618;InbreedingCoeff=0.1981;MQ=70.90;MQ0=2;MQRankSum=-0.524;QD=9.14;ReadPosRankSum=-2.864;VQSLOD=2.3709;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:35,1:38:6.81:7,0,263	1/1:7,1:8:11.83:92,12,0	0/0:27,1:14:7.22:0,7,42	0/0:28,0:20:5.77:0,6,33	0/0:18,0:18:22.85:0,23,162	0/1:7,4:10:11.51:47,0,12	1/1:1,11:12:18.02:167,18,0	1/1:9,16:25:1.27:271,1,0	0/1:7,11:18:2.56:121,0,3	1/1:21,9:29:21.35:310,21,0	0/1:11,5:16:20.10:112,0,20	1/1:12,5:17:21.53:277,22,0	0/1:11,0:11:6.44:6,0,102	1/1:3,10:13:2.45:142,2,0	0/1:6,8:15:49.48:148,0,49	1/1:1,11:13:21.43:220,21,0	0/1:15,9:24:17.98:272,0,18	0/0:7,0:23:29.40:0,29,97	1/1:4,9:13:26.96:234,27,0	0/1:5,8:15:14.55:142,0,15	0/1:7,8:14:2.09:121,0,2	0/1:5,8:13:8.46:65,0,8	0/0:13,0:15:27.61:0,28,174	0/0:21,0:23:21.94:0,22,255	1/1:5,6:12:14.85:126,15,0	1/1:17,12:29:43.59:387,44,0	1/1:3,9:12:12.01:111,12,0	0/1:11,5:18:6.57:106,0,7
chr10	66137233	.	GGGT	G	270.54	PASS	AC=4;AF=0.091;AN=44;BaseQRankSum=1.730;DP=119;FS=4.395;HRun=0;HaplotypeScore=27.0453;InbreedingCoeff=0.3928;MQ=82.97;MQ0=1;MQRankSum=-2.193;QD=18.04;ReadPosRankSum=1.800;VQSLOD=2.5782;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:14.74:0,15,130	./.	0/0:16,0:9:24.04:0,24,263	0/0:20,0:12:11.48:0,11,158	0/0:7,0:7:15.02:0,15,174	./.	0/0:5,0:5:5.10:0,5,25	0/0:2,0:2:5.97:0,6,47	0/0:4,0:4:4.30:0,4,21	1/1:2,0:2:2.97:20,3,0	0/0:1,0:1:0:0,0,0	0/0:1,0:1:0.89:0,1,2	0/0:4,0:4:9.01:0,9,132	0/0:2,0:2:5.96:0,6,52	0/0:2,0:2:2.84:0,3,14	0/0:4,0:3:9.03:0,9,128	0/0:3,0:3:5.94:0,6,41	1/1:9,4:12:32.23:351,32,0	0/0:6,0:5:9.84:0,10,83	./.	./.	./.	0/0:1,0:1:3.01:0,3,46	0/0:6,0:6:11.34:0,11,104	./.	0/0:1,0:1:2.97:0,3,20	0/0:1,0:1:2.99:0,3,24	0/0:1,0:1:3.01:0,3,32
chr10	66137235	.	GTGT	G	127.10	PASS	AB=0.968;AC=8;AF=0.167;AN=48;BaseQRankSum=2.930;DP=117;FS=18.292;HRun=0;HaplotypeScore=25.4647;InbreedingCoeff=0.1695;MQ=84.17;MQ0=1;MQRankSum=-3.100;QD=2.89;ReadPosRankSum=0.894;VQSLOD=-0.4673;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:17.69:0,18,268	./.	0/0:13,0:8:21.03:0,21,281	0/1:18,1:11:10.34:10,0,189	0/0:8,0:8:17.79:0,18,257	./.	0/0:5,0:5:4.38:0,4,72	0/0:3,0:3:9.03:0,9,145	0/1:2,0:2:19.42:19,0,30	0/1:2,0:2:0:0,0,0	0/0:1,0:1:2.80:0,3,13	0/0:1,0:1:2.37:0,2,8	0/0:5,0:5:12.02:0,12,186	0/0:2,0:2:6.02:0,6,82	0/0:3,0:3:6.02:0,6,85	0/0:4,0:3:9.03:0,9,163	0/0:2,0:2:3.01:0,3,45	1/1:10,3:12:23.36:188,23,0	0/1:5,1:5:17.83:18,0,122	0/1:1,0:1:0:0,0,0	./.	0/1:1,0:1:0:0,0,0	0/0:1,0:1:3.01:0,3,60	0/0:6,0:6:11.84:0,12,177	./.	0/0:1,0:1:3.01:0,3,40	0/0:1,0:1:3.01:0,3,48	0/0:1,0:1:3.01:0,3,55
chr10	66137324	.	GA	G	2803.42	PASS	AB=0.721;AC=37;AF=0.661;AN=56;BaseQRankSum=3.082;DP=341;FS=11.235;HRun=11;HaplotypeScore=35.4537;InbreedingCoeff=0.7088;MQ=50.49;MQ0=15;MQRankSum=-0.585;QD=14.09;ReadPosRankSum=2.868;VQSLOD=2.2712;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,1:27:38.50:0,38,604	1/1:4,1:5:11.91:90,12,0	0/1:29,0:6:8.22:8,0,70	0/0:36,0:6:4.56:0,5,38	0/0:17,0:17:45.10:0,45,472	1/1:0,9:8:23.97:197,24,0	1/1:4,10:12:29.96:246,30,0	1/1:6,0:4:2.04:6,2,0	0/0:4,0:4:9.02:0,9,96	1/1:2,6:8:14.98:123,15,0	0/1:4,10:12:1.70:191,0,2	1/1:2,3:4:8.99:74,9,0	0/0:7,0:7:18.04:0,18,188	1/1:1,6:7:11.98:98,12,0	1/1:2,4:6:11.99:98,12,0	1/1:0,10:10:29.97:246,30,0	1/1:1,22:23:56.93:468,57,0	0/0:24,0:22:57.05:0,57,583	0/1:3,8:10:4.67:170,0,5	1/1:0,8:8:23.97:197,24,0	1/1:2,9:11:23.97:197,24,0	1/1:0,6:6:17.98:147,18,0	0/0:15,0:14:14.23:0,14,327	0/0:12,0:12:27.07:0,27,288	1/1:2,6:7:8.98:74,9,0	1/1:2,4:5:11.98:98,12,0	1/1:1,9:10:26.97:221,27,0	1/1:1,2:2:5.99:49,6,0
chr10	66137546	.	CG	C	1102.94	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=3.923;DP=551;FS=5.679;HRun=3;HaplotypeScore=88.3466;InbreedingCoeff=0.9804;MQ=61.46;MQ0=0;MQRankSum=-2.748;QD=26.90;ReadPosRankSum=0.118;VQSLOD=2.6000;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:72.23:0,72,1010	0/0:8,0:8:24.08:0,24,342	0/0:9,0:9:24.08:0,24,334	0/0:13,0:12:39.11:0,39,515	0/0:11,0:11:24.07:0,24,327	0/0:24,0:23:69.19:0,69,968	0/0:22,0:22:62.91:0,63,742	0/0:22,0:22:57.19:0,57,815	0/0:22,0:22:54.10:0,54,729	1/1:2,19:21:57.18:704,57,0	1/1:3,17:20:42.60:520,43,0	0/0:28,0:28:75.07:0,75,954	0/0:27,0:27:66.18:0,66,914	0/0:23,0:23:60.20:0,60,858	0/0:22,0:22:65.92:0,66,785	0/0:25,0:25:69.19:0,69,964	0/0:29,0:29:84.15:0,84,1100	0/0:11,0:11:33.11:0,33,469	0/0:17,0:17:51.13:0,51,708	0/0:15,0:15:42.14:0,42,601	0/0:26,0:26:66.19:0,66,911	0/0:29,0:29:66.18:0,66,924	0/0:11,0:11:27.05:0,27,365	0/0:26,0:26:60.02:0,60,770	0/0:14,0:14:36.12:0,36,512	0/0:25,1:26:32.25:0,32,885	0/0:17,0:17:51.17:0,51,716	0/0:4,0:4:12.04:0,12,172
chr10	66138687	.	TCA	T	728.50	PASS	AB=0.971;AC=17;AF=0.304;AN=56;BaseQRankSum=6.062;DP=416;FS=3.761;HRun=0;HaplotypeScore=91.5137;InbreedingCoeff=-0.1452;MQ=71.87;MQ0=7;MQRankSum=-5.213;QD=4.19;ReadPosRankSum=7.407;VQSLOD=1.5562;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:9.53:0,10,219	0/1:5,1:6:12.27:66,0,12	0/0:47,0:14:35.57:0,36,364	0/0:47,0:19:9.08:0,9,167	0/0:17,0:17:40.77:0,41,350	1/1:13,0:13:5.35:121,5,0	0/1:8,0:8:14.72:45,0,15	0/0:18,0:18:36.20:0,36,240	0/1:8,1:9:30.43:30,0,84	0/0:27,0:26:74.06:0,74,992	0/0:16,0:16:45.88:0,46,505	0/1:5,0:5:12.87:13,0,61	0/0:8,0:8:20.53:0,21,213	0/1:10,1:11:45.56:51,0,46	0/1:10,0:10:24.59:50,0,25	0/1:7,0:6:15.36:30,0,15	1/1:10,0:10:19.40:72,19,0	0/1:11,0:11:26.90:27,0,80	0/0:15,0:15:4.02:0,4,140	0/1:17,1:18:58.13:113,0,58	0/0:5,0:5:6:0,6,53	0/0:7,0:7:6.79:0,7,80	0/0:9,0:9:26.93:0,27,407	0/0:5,0:5:12.01:0,12,168	0/1:15,0:15:50.20:88,0,50	0/1:12,0:12:40.37:40,0,70	0/1:21,0:21:34.25:104,0,34	0/1:18,0:17:10.76:42,0,11
chr10	66138688	.	CAA	C	2742.90	PASS	AB=0.705;AC=34;AF=0.607;AN=56;BaseQRankSum=-1.083;DP=427;FS=4.402;HRun=16;HaplotypeScore=87.0065;InbreedingCoeff=0.6863;MQ=71.10;MQ0=8;MQRankSum=-2.057;QD=11.82;ReadPosRankSum=5.177;VQSLOD=3.0142;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:5,3:21:41.09:41,0,125	1/1:3,3:6:14.94:120,15,0	0/0:51,0:16:29.83:0,30,259	0/0:48,0:19:12.44:0,12,117	0/0:6,1:17:24.12:0,24,160	1/1:4,9:13:33.52:250,34,0	1/1:1,5:8:20.46:149,20,0	1/1:7,0:18:24.98:106,25,0	0/1:3,5:8:21.30:107,0,21	0/0:29,0:30:60.67:0,61,676	0/0:13,0:15:33.07:0,33,375	0/1:4,0:4:1.32:20,0,1	0/0:7,0:8:20.89:0,21,230	1/1:7,3:11:16.34:97,16,0	1/1:4,4:10:20.29:130,20,0	1/1:1,5:6:12.07:140,12,0	1/1:2,8:10:23.93:194,24,0	1/1:8,3:11:11.85:92,12,0	0/1:6,6:14:1.09:99,0,1	1/1:6,11:18:5.31:286,5,0	0/0:3,0:6:4.19:0,4,12	1/1:3,3:7:5.64:37,6,0	0/0:10,0:11:29.42:0,29,324	0/0:4,0:6:14.39:0,14,150	1/1:6,7:15:28.62:193,29,0	1/1:6,6:12:23.62:187,24,0	1/1:5,16:21:37.21:320,37,0	1/1:3,14:17:47.62:379,48,0
chr10	66138702	.	AAAG	A	406.06	PASS	AB=0.974;AC=15;AF=0.268;AN=56;BaseQRankSum=6.147;DP=533;FS=12.893;HRun=0;HaplotypeScore=116.0308;InbreedingCoeff=-0.1450;MQ=71.03;MQ0=13;MQRankSum=-6.023;QD=2.11;ReadPosRankSum=1.351;VQSLOD=1.4000;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:59.19:0,59,561	0/1:8,0:8:8.87:9,0,88	0/0:74,0:19:37.57:0,38,508	0/0:67,0:21:3.24:0,3,171	0/0:18,0:18:38.66:0,39,425	0/1:20,0:20:19.36:19,0,172	0/1:10,0:10:1.29:1,0,101	1/1:19,0:19:8.08:100,8,0	0/0:11,0:11:10.89:0,11,147	0/0:30,0:30:61.91:0,62,936	0/0:20,0:19:40:0,40,545	0/0:6,0:6:4.07:0,4,75	0/0:9,0:9:26.86:0,27,388	0/1:10,0:10:54.91:55,0,93	0/1:10,1:11:15.78:149,0,16	0/1:8,1:9:12.63:13,0,93	0/1:12,1:13:13.29:13,0,134	0/1:11,1:12:1.68:70,0,2	0/1:14,0:14:35.66:36,0,140	0/1:22,0:22:8.82:9,0,255	0/0:10,0:10:19.42:0,19,165	0/1:6,0:6:14.47:14,0,45	0/0:15,0:15:43.87:0,44,620	0/0:7,0:7:18.04:0,18,279	0/1:19,0:19:52.44:52,0,130	0/0:18,0:18:10.93:0,11,280	0/0:27,0:27:10.16:0,10,236	0/1:19,0:19:17.33:17,0,143
chr10	66138705	.	GT	G	525.82	PASS	AB=0.952;AC=11;AF=0.196;AN=56;BaseQRankSum=1.957;DP=542;FS=0.000;HRun=11;HaplotypeScore=101.1621;InbreedingCoeff=0.4075;MQ=68.34;MQ0=13;MQRankSum=0.979;QD=3.09;ReadPosRankSum=-2.479;VQSLOD=-0.0562;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:32.33:0,32,501	0/0:9,0:9:25.61:0,26,250	0/0:74,0:17:15.11:0,15,187	0/1:64,0:19:10.34:10,0,18	0/0:19,0:19:26.32:0,26,231	0/0:20,0:21:28.71:0,29,413	0/0:10,0:10:29.42:0,29,281	1/1:12,7:19:41.77:329,42,0	0/0:12,0:12:26.53:0,27,246	0/1:30,0:30:8.83:120,0,9	1/1:20,0:19:18.04:147,18,0	0/1:6,0:6:32.18:32,0,68	0/0:9,0:9:18:0,18,177	0/0:9,1:10:18.01:0,18,174	0/1:10,1:11:8.02:8,0,98	0/0:9,0:8:17.71:0,18,162	0/0:14,0:14:33.49:0,33,326	1/1:13,0:13:3.45:27,3,0	0/0:18,0:18:31.54:0,32,308	0/0:22,0:22:45.08:0,45,458	0/0:11,0:11:18.51:0,19,187	0/1:5,1:6:6.35:6,0,127	0/0:14,1:15:11.46:0,11,301	0/0:7,0:7:14.96:0,15,132	0/0:19,0:19:7.67:0,8,263	0/0:18,0:18:36.34:0,36,421	0/0:26,0:26:46.74:0,47,484	0/0:19,1:20:19.92:0,20,422
chr10	66138715	.	TTC	T	449.53	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=5.151;DP=555;FS=2.600;HRun=0;HaplotypeScore=102.6402;InbreedingCoeff=0.9133;MQ=67.74;MQ0=12;MQRankSum=2.237;QD=6.61;ReadPosRankSum=-0.194;VQSLOD=3.0851;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:62.86:0,63,975	0/0:10,0:10:28.64:0,29,459	0/0:62,0:17:25.16:0,25,393	0/0:62,0:22:15.99:0,16,243	0/0:18,0:18:45.08:0,45,610	0/0:22,0:22:59.50:0,60,845	0/0:12,0:12:35.96:0,36,551	0/0:21,0:21:50.78:0,51,369	0/0:12,0:12:33.10:0,33,550	1/1:30,0:30:3.08:235,3,0	1/1:21,1:21:39.38:174,39,0	0/0:8,0:8:22.54:0,23,212	0/0:8,0:8:21.01:0,21,315	0/0:10,0:10:27:0,27,370	0/0:12,0:12:18.25:0,18,294	0/0:10,0:9:26.73:0,27,372	0/0:15,0:15:39.55:0,40,614	1/1:4,11:16:14.84:171,15,0	0/0:13,0:13:38.61:0,39,608	0/0:24,0:24:57.10:0,57,879	0/0:11,0:11:22.62:0,23,373	0/0:12,0:12:35.92:0,36,436	0/0:18,0:18:50.83:0,51,712	0/0:7,0:7:18.03:0,18,265	0/0:22,0:22:40.46:0,40,614	0/0:21,0:21:51.88:0,52,826	0/0:25,0:25:62.50:0,62,930	0/0:23,0:23:60.84:0,61,929
chr10	66138716	.	TC	T	1186.87	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=4.785;DP=525;FS=1.057;HRun=2;HaplotypeScore=76.3638;InbreedingCoeff=0.8784;MQ=68.13;MQ0=12;MQRankSum=-0.144;QD=19.46;ReadPosRankSum=-0.465;VQSLOD=3.4570;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:54.80:0,55,658	0/0:9,0:9:27.06:0,27,318	0/0:59,0:16:8.70:0,9,237	0/0:61,0:21:18.79:0,19,184	0/0:16,0:16:44.96:0,45,452	0/0:18,0:18:50.87:0,51,567	0/0:12,0:12:24.10:0,24,380	0/0:21,0:21:12.04:0,12,189	0/0:12,0:12:33.09:0,33,403	1/1:2,24:26:65.97:702,66,0	1/1:1,21:21:50.83:544,51,0	0/0:7,0:7:14.41:0,14,154	0/0:7,0:7:18.04:0,18,217	0/0:11,0:11:29.78:0,30,277	0/0:10,0:10:9.10:0,9,152	0/0:10,0:10:10.12:0,10,285	0/0:15,0:15:41.43:0,41,474	1/1:13,0:13:14.31:81,14,0	0/0:13,0:13:34.31:0,34,409	0/0:22,0:22:59.58:0,60,627	0/0:11,0:11:6.13:0,6,266	0/0:12,0:12:28.37:0,28,294	0/0:17,0:17:34.79:0,35,508	0/0:8,0:8:18.04:0,18,210	0/0:18,0:18:33.79:0,34,481	0/0:19,1:20:18.17:0,18,518	0/0:25,0:25:40.27:0,40,672	0/0:24,0:24:46.69:0,47,626
chr10	66139188	.	GA	G	795.40	PASS	AB=0.929;AC=7;AF=0.125;AN=56;BaseQRankSum=9.651;DP=596;FS=4.653;HRun=12;HaplotypeScore=71.2273;InbreedingCoeff=0.7129;MQ=79.48;MQ0=1;MQRankSum=0.960;QD=7.95;ReadPosRankSum=1.066;VQSLOD=2.6360;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,3:45:47.15:0,47,972	0/0:10,0:10:24.05:0,24,244	0/0:31,1:21:11.17:0,11,86	0/1:24,2:20:23.65:24,0,106	0/0:17,1:19:21.70:0,22,377	0/0:19,2:21:21.82:0,22,385	0/0:18,0:20:46.99:0,47,496	0/0:30,1:31:45.82:0,46,607	0/0:19,0:19:45.08:0,45,452	1/1:3,19:24:57.85:430,58,0	1/1:6,15:22:46.83:354,47,0	0/0:12,1:13:9.84:0,10,281	0/0:15,1:18:20.85:0,21,410	0/0:7,0:7:20.98:0,21,200	0/0:15,0:15:27.04:0,27,268	0/0:18,1:20:18:0,18,393	0/0:40,1:42:79.47:0,79,975	1/1:4,0:28:46.85:135,47,0	0/0:22,0:24:25.58:0,26,438	0/0:20,2:22:1.64:0,2,378	0/0:15,1:18:11.81:0,12,315	0/0:14,1:16:11.89:0,12,330	0/0:17,2:22:10.28:0,10,422	0/0:14,1:15:9.83:0,10,281	0/0:10,0:10:21.03:0,21,204	0/0:28,2:30:16.64:0,17,528	0/0:20,0:20:45.08:0,45,450	0/0:7,0:7:21:0,21,203
chr10	66143630	.	C	CT	460.31	PASS	AB=0.772;AC=4;AF=0.071;AN=56;BaseQRankSum=-4.554;DP=554;FS=3.116;HRun=13;HaplotypeScore=60.0399;InbreedingCoeff=-0.0607;MQ=71.12;MQ0=2;MQRankSum=0.334;QD=5.98;ReadPosRankSum=-1.509;VQSLOD=1.8433;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:35:80.35:0,80,529	0/0:10,0:10:26.74:0,27,182	0/0:24,0:15:13.79:0,14,87	0/1:16,0:16:23.82:24,0,34	0/0:22,0:23:46.97:0,47,314	0/0:17,0:19:20.25:0,20,238	0/0:15,1:17:6.84:0,7,183	0/0:27,1:28:28.64:0,29,340	0/0:16,0:16:26.55:0,27,185	0/1:11,20:31:10.70:339,0,11	0/1:6,9:15:27.46:183,0,27	0/0:21,0:22:49.55:0,50,335	0/0:14,0:15:31.69:0,32,211	0/0:18,1:19:5.95:0,6,192	0/0:24,0:27:30.09:0,30,315	0/0:17,0:17:35.56:0,36,245	0/0:22,0:22:47.45:0,47,329	0/0:18,0:18:36.88:0,37,246	0/0:30,0:32:60.50:0,61,401	0/0:25,0:28:42.88:0,43,329	0/1:10,2:12:22.95:23,0,152	0/0:8,0:8:14.80:0,15,103	0/0:11,0:11:23.72:0,24,163	0/0:20,1:21:25.67:0,26,321	0/0:12,1:14:3.86:0,4,161	0/0:15,0:15:26.70:0,27,185	0/0:18,2:21:9.84:0,10,204	0/0:15,0:15:38.64:0,39,267
chr10	66144543	.	CTGAAGAGGAAGGTGG	C	844.41	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.405;DP=700;FS=3.250;HRun=0;HaplotypeScore=289.3277;InbreedingCoeff=0.9937;MQ=80.03;MQ0=0;MQRankSum=-4.516;QD=84.44;ReadPosRankSum=1.345;VQSLOD=3.2414;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:78.27:0,78,4983	0/0:19,0:19:57.20:0,57,4160	0/0:24,0:25:66.22:0,66,3459	0/0:13,0:12:36.09:0,36,2177	0/0:39,0:39:99:0,114,8074	0/0:18,0:18:54.19:0,54,3779	0/0:27,0:27:81.28:0,81,5382	0/0:24,0:24:69.23:0,69,4675	0/0:27,0:27:78.27:0,78,5700	0/0:41,0:41:99:0,111,7984	0/0:33,0:33:96.33:0,96,6484	0/0:21,0:21:63.20:0,63,4133	0/0:25,0:25:69.21:0,69,4284	0/0:12,0:12:36.12:0,36,2407	0/0:19,0:19:54.19:0,54,3810	0/0:23,0:23:66.22:0,66,4054	0/0:44,0:44:99:0,129,8700	1/1:2,8:10:21.07:937,21,0	0/0:20,0:20:60.21:0,60,3720	0/0:35,0:35:99:0,99,7071	0/0:24,0:24:63.20:0,63,3357	0/0:37,0:37:99:0,105,6935	0/0:28,0:28:84.29:0,84,6080	0/0:23,0:23:66.18:0,66,4609	0/0:19,0:19:51.16:0,51,2975	0/0:34,0:34:96.33:0,96,6301	0/0:22,0:22:66.22:0,66,4656	0/0:10,0:10:24.08:0,24,1663
chr10	66145449	.	TG	T	1241.91	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.013;DP=700;FS=0.000;HRun=2;HaplotypeScore=65.5928;InbreedingCoeff=0.9844;MQ=89.76;MQ0=0;MQRankSum=-5.148;QD=33.57;ReadPosRankSum=0.507;VQSLOD=3.6530;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:56:99:0,169,2517	0/0:4,0:4:12.04:0,12,180	0/0:26,0:26:75.25:0,75,1111	0/0:28,0:28:78.23:0,78,1121	0/0:24,0:24:69.23:0,69,1031	0/0:24,0:23:72.24:0,72,1076	0/0:29,0:29:84.28:0,84,1253	0/0:29,0:29:81.25:0,81,1159	0/0:20,0:20:60.20:0,60,899	1/1:0,19:19:54.18:701,54,0	1/1:0,18:18:51.17:662,51,0	0/0:21,0:21:63.21:0,63,936	0/0:23,0:23:69.23:0,69,1033	0/0:20,0:20:60.19:0,60,879	0/0:30,0:30:84.28:0,84,1252	0/0:16,0:16:48.16:0,48,719	0/0:40,0:40:99:0,120,1779	0/0:28,0:28:78.26:0,78,1169	0/0:26,0:26:72.16:0,72,1050	0/0:26,0:26:72.23:0,72,1055	0/0:40,0:40:99:0,117,1747	0/0:18,0:18:54.18:0,54,809	0/0:16,0:16:48.16:0,48,718	0/0:33,0:33:99:0,99,1484	0/0:22,0:22:66.22:0,66,988	0/0:26,0:26:78.25:0,78,1150	0/0:21,0:21:63.21:0,63,944	0/0:17,0:17:51.17:0,51,762
chr10	66146012	.	CG	C	285.69	PASS	AC=4;AF=0.077;AN=52;BaseQRankSum=4.598;DP=361;FS=3.783;HRun=1;HaplotypeScore=50.4477;InbreedingCoeff=0.8773;MQ=45.39;MQ0=12;MQRankSum=-2.094;QD=16.81;ReadPosRankSum=-1.898;VQSLOD=3.2164;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:23.88:0,24,296	0/0:8,0:8:18.06:0,18,276	./.	./.	0/0:16,0:16:36.08:0,36,535	0/0:12,0:12:30.04:0,30,413	0/0:10,0:9:6.02:0,6,90	0/0:17,0:17:51.02:0,51,702	0/0:9,0:9:21.07:0,21,328	1/1:5,6:10:21.60:302,22,0	1/1:2,4:5:8.99:96,9,0	0/0:6,0:6:18.05:0,18,260	0/0:10,0:10:30.06:0,30,404	0/0:15,0:15:45.05:0,45,581	0/0:10,0:10:17.99:0,18,209	0/0:17,0:17:47.95:0,48,667	0/0:13,0:12:21.53:0,22,305	0/0:11,0:8:12.04:0,12,171	0/0:9,0:8:24.04:0,24,327	0/0:13,0:11:33.06:0,33,467	0/0:15,0:13:23.78:0,24,261	0/0:12,0:11:20.98:0,21,237	0/0:15,0:15:26.58:0,27,332	0/0:20,0:20:38.77:0,39,552	0/0:15,0:15:21.04:0,21,290	0/0:20,0:19:22.24:0,22,617	0/0:23,0:22:56.98:0,57,746	0/0:23,0:22:56.68:0,57,619
chr10	66146987	.	GC	G	274.18	PASS	AB=0.860;AC=5;AF=0.147;AN=34;BaseQRankSum=2.755;DP=208;FS=2.369;HRun=2;HaplotypeScore=34.4472;InbreedingCoeff=0.0463;MQ=32.01;MQ0=53;MQRankSum=-2.691;QD=3.15;ReadPosRankSum=1.375;VQSLOD=-0.0048;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:2:0.47:0,0,1	./.	./.	./.	./.	./.	0/1:36,8:33:99:288,0,340	./.	0/0:7,0:3:7.27:0,7,86	0/0:3,0:1:3.01:0,3,45	./.	0/0:8,0:4:7.27:0,7,93	./.	0/1:8,1:7:17.78:18,0,174	0/0:6,0:5:10.26:0,10,114	0/1:8,2:8:50.62:51,0,162	0/0:21,0:15:24.06:0,24,331	0/0:11,0:9:27.06:0,27,328	0/0:4,0:3:6:0,6,53	./.	1/1:22,2:12:1.57:13,2,0	0/0:1,0:1:1.25:0,1,3	./.	0/0:37,0:30:59.08:0,59,744	./.	0/0:4,0:2:5.99:0,6,48	0/0:3,0:1:3.01:0,3,42	0/0:1,0:1:3.01:0,3,45
chr10	66147002	.	GC	G	325.07	PASS	AB=0.936;AC=9;AF=0.321;AN=28;BaseQRankSum=2.248;DP=159;FS=0.000;HRun=2;HaplotypeScore=38.9409;InbreedingCoeff=-0.0162;MQ=30.91;MQ0=33;MQRankSum=-1.264;QD=3.69;ReadPosRankSum=-1.291;VQSLOD=-0.2540;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:3,0:1:3.01:0,3,45	./.	./.	./.	./.	./.	0/1:32,5:30:99:214,0,391	0/1:3,0:2:0:0,0,0	0/0:3,0:2:6.02:0,6,88	./.	./.	1/1:7,1:3:2.41:35,2,0	./.	0/1:7,1:6:26.53:27,0,45	0/0:4,0:3:4.56:0,5,47	0/1:7,0:4:29.76:30,0,38	0/0:18,0:14:12.04:0,12,175	0/1:9,1:9:80.95:81,0,224	0/0:1,0:1:0.47:0,0,1	./.	1/1:14,1:9:2.11:38,2,0	./.	./.	0/0:29,1:25:12.37:0,12,663	./.	./.	0/0:1,0:1:3.01:0,3,45	./.
chr10	66147022	.	G	GC	1046.59	PASS	AB=0.676;AC=16;AF=0.533;AN=30;BaseQRankSum=0.671;DP=127;FS=1.537;HRun=1;HaplotypeScore=25.2327;InbreedingCoeff=0.3183;MQ=36.74;MQ0=22;MQRankSum=1.697;QD=13.08;ReadPosRankSum=-2.922;VQSLOD=1.3551;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:2,0:2:6.02:0,6,78	./.	./.	./.	./.	0/0:3,0:2:3.89:0,4,33	0/1:11,5:13:94.99:124,0,95	0/0:2,0:1:2.96:0,3,19	0/0:3,0:2:3.01:0,3,39	./.	./.	1/1:3,4:4:9.03:126,9,0	./.	1/1:5,1:6:3.05:97,3,0	1/1:0,3:3:4.56:46,5,0	1/1:3,2:2:6.02:86,6,0	1/1:9,10:15:21.07:290,21,0	0/1:4,9:13:47.30:308,0,47	0/0:2,0:1:0.89:0,1,2	./.	1/1:10,0:6:3.01:44,3,0	./.	./.	0/0:21,1:19:21.98:0,22,398	./.	./.	1/1:0,1:1:3.01:42,3,0	./.
chr10	66148867	.	AG	A	989.25	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.655;DP=548;FS=28.648;HRun=2;HaplotypeScore=63.2633;InbreedingCoeff=0.9880;MQ=74.57;MQ0=2;MQRankSum=0.409;QD=29.98;ReadPosRankSum=0.273;VQSLOD=1.7046;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,128,1869	0/0:8,0:8:24.08:0,24,349	0/0:36,0:29:69.47:0,69,919	0/0:35,3:31:61.02:0,61,865	0/0:13,0:13:39.13:0,39,581	0/0:16,0:16:45.14:0,45,654	0/0:24,0:24:69.12:0,69,944	0/0:15,0:15:42.14:0,42,629	0/0:14,0:14:42.13:0,42,599	1/1:1,23:24:66.19:820,66,0	1/1:0,9:9:24.01:290,24,0	0/0:20,0:20:57.18:0,57,835	0/0:26,0:26:72.24:0,72,1068	0/0:23,0:23:69.19:0,69,971	0/0:24,0:24:72.22:0,72,1038	0/0:15,0:15:42.13:0,42,607	0/0:21,0:21:60.20:0,60,899	0/0:32,0:32:86.38:0,86,1297	0/0:15,0:15:45.12:0,45,630	0/0:20,0:20:57.18:0,57,834	0/0:20,0:20:60.20:0,60,899	0/0:17,0:17:48.16:0,48,718	0/0:11,0:11:33.10:0,33,470	0/0:20,0:20:57.64:0,58,832	0/0:9,0:9:24.08:0,24,359	0/0:17,0:17:48:0,48,631	0/0:9,0:9:27.08:0,27,384	0/0:5,0:5:15.05:0,15,225
chr10	66150217	.	AACACACACACACACAC	A	5498.20	PASS	AB=0.745;AC=34;AF=0.630;AN=54;BaseQRankSum=8.415;DP=479;FS=0.632;HRun=0;HaplotypeScore=173.5906;InbreedingCoeff=0.5489;MQ=66.50;MQ0=15;MQRankSum=-4.072;QD=19.43;ReadPosRankSum=1.888;VQSLOD=3.5131;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:21.07:0,21,942	1/1:2,5:7:8.99:282,9,0	./.	0/0:29,0:17:3.01:0,3,56	0/0:22,0:23:42.02:0,42,2492	1/1:8,12:18:12.04:524,12,0	1/1:11,7:18:3.01:131,3,0	0/0:15,0:14:12.03:0,12,130	0/1:7,0:13:54.62:120,0,55	0/1:12,0:11:2.08:2,0,25	1/1:4,0:11:8.24:150,8,0	1/1:6,4:10:6.02:263,6,0	0/0:13,0:13:13.60:0,14,788	1/1:7,4:10:9.03:393,9,0	1/1:9,13:22:8.97:902,9,0	1/1:9,1:11:11.95:283,12,0	1/1:13,6:16:2.58:130,3,0	0/0:16,0:16:23.05:0,23,853	1/1:6,0:6:6.02:79,6,0	1/1:5,13:20:19.25:723,19,0	1/1:24,0:23:20.96:281,21,0	0/1:9,7:15:8.10:141,0,8	0/0:21,0:22:41.07:0,41,2001	0/0:16,0:13:21.05:0,21,876	1/1:4,11:15:9.03:393,9,0	0/1:5,10:15:4.39:146,0,4	1/1:11,11:22:12.91:425,13,0	1/1:3,7:8:3.01:131,3,0
chr10	66150484	.	T	TAAAG	26579.57	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=-14.149;DP=606;FS=6.653;HRun=0;HaplotypeScore=82.9630;InbreedingCoeff=0.9831;MQ=87.82;MQ0=0;MQRankSum=-7.455;QD=61.67;ReadPosRankSum=1.473;VQSLOD=6.8395;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,114,2058	1/1:1,5:6:12.04:317,12,0	0/0:28,0:28:75.22:0,75,1289	0/0:22,0:22:54.05:0,54,857	0/0:14,0:14:39.13:0,39,710	1/1:3,27:31:66.23:1742,66,0	1/1:3,15:18:36.12:949,36,0	1/1:9,18:29:75.23:1836,75,0	1/1:0,16:16:42.14:1109,42,0	1/1:1,13:15:45.14:1107,45,0	1/1:3,16:19:44.96:903,45,0	1/1:1,15:17:39.13:1029,39,0	0/0:24,0:24:72.23:0,72,1295	1/1:1,16:17:45.15:1187,45,0	1/1:2,19:22:48.16:1266,48,0	1/1:4,18:23:54.19:1388,54,0	1/1:3,25:28:72.25:1877,72,0	1/1:0,22:23:54.19:1425,54,0	1/1:6,19:25:63.20:1557,63,0	1/1:4,22:26:69.20:1742,69,0	1/1:5,28:35:81.19:1978,81,0	1/1:1,10:11:21.07:554,21,0	0/0:16,0:16:48.15:0,48,852	0/0:30,0:29:87.25:0,87,1546	1/1:1,16:17:42.06:969,42,0	1/1:1,20:21:57.20:1495,57,0	1/1:4,25:29:75.21:1914,75,0	1/1:0,3:3:9.03:238,9,0
chr10	66151270	.	A	ATG	1054.68	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.705;DP=658;FS=14.853;HRun=0;HaplotypeScore=88.4514;InbreedingCoeff=0.9938;MQ=87.51;MQ0=0;MQRankSum=-6.521;QD=34.02;ReadPosRankSum=-0.456;VQSLOD=4.8695;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,108,1702	0/0:9,0:9:27.09:0,27,441	0/0:22,0:21:63.11:0,63,947	0/0:25,0:25:69.18:0,69,1057	0/0:20,0:20:57.19:0,57,928	0/0:21,0:21:60.19:0,60,953	0/0:25,0:25:75.18:0,75,1144	0/0:27,0:27:81.26:0,81,1281	0/0:25,0:25:75.24:0,75,1199	1/1:6,15:21:61.44:925,61,0	1/1:5,5:10:18.53:250,19,0	0/0:28,0:28:84.29:0,84,1366	0/0:35,0:35:99:0,105,1690	0/0:31,0:31:90.30:0,90,1444	0/0:31,0:31:93.30:0,93,1491	0/0:25,0:25:75.25:0,75,1199	0/0:25,0:25:69.21:0,69,1074	0/0:14,0:14:39.10:0,39,608	0/0:24,0:24:72.25:0,72,1160	0/0:17,0:17:51.16:0,51,801	0/0:44,0:44:99:0,132,2121	0/0:8,0:8:24.07:0,24,369	0/0:14,0:14:42.14:0,42,679	0/0:25,0:25:75.24:0,75,1191	0/0:22,0:22:66.23:0,66,1069	0/0:24,1:25:25.16:0,25,1055	0/0:32,0:32:96.33:0,96,1556	0/0:17,0:17:51.16:0,51,803
chr10	66151272	.	G	GA	695.41	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.511;DP=659;FS=11.552;HRun=2;HaplotypeScore=77.2466;InbreedingCoeff=0.9090;MQ=87.50;MQ0=0;MQRankSum=-6.933;QD=22.43;ReadPosRankSum=0.825;VQSLOD=2.3598;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,111,1483	0/0:10,0:10:27.09:0,27,378	0/0:22,0:22:63.16:0,63,833	0/0:24,0:24:69.07:0,69,870	0/0:21,0:21:60.19:0,60,817	0/0:20,0:20:60.20:0,60,834	0/0:24,0:24:72.22:0,72,969	0/0:25,0:25:75.25:0,75,1049	0/0:27,0:27:75.25:0,75,1045	1/1:17,3:20:56.63:620,57,0	1/1:7,4:11:3.51:185,4,0	0/0:28,0:28:84.27:0,84,1159	0/0:34,0:34:99:0,102,1421	0/0:31,0:31:90.29:0,90,1235	0/0:31,0:31:93.30:0,93,1283	0/0:24,0:24:72.23:0,72,992	0/0:25,0:25:72.22:0,72,967	0/0:16,0:16:39.11:0,39,523	0/0:24,0:24:72.21:0,72,969	0/0:16,0:16:48.13:0,48,637	0/0:44,0:44:99:0,132,1811	0/0:8,0:8:24.08:0,24,335	0/0:14,0:14:42.13:0,42,563	0/0:24,0:24:72.21:0,72,985	0/0:22,0:22:66.22:0,66,923	0/0:26,0:26:41.20:0,41,939	0/0:33,0:33:99:0,99,1357	0/0:17,0:17:51.17:0,51,712
chr10	66151273	.	G	GCCT	671.48	PASS	AB=0.688;AC=3;AF=0.054;AN=56;BaseQRankSum=8.576;DP=655;FS=11.549;HRun=0;HaplotypeScore=103.8633;InbreedingCoeff=0.8226;MQ=88.16;MQ0=0;MQRankSum=-7.060;QD=22.38;ReadPosRankSum=0.907;VQSLOD=3.0213;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,111,1977	0/0:10,0:10:30.09:0,30,528	0/0:23,0:23:63.66:0,64,1087	0/0:24,0:24:62.42:0,62,1052	0/0:21,0:21:60.19:0,60,1085	0/0:20,0:20:60.17:0,60,1055	0/0:24,0:24:72.23:0,72,1264	0/0:25,0:25:75.26:0,75,1372	0/0:27,0:27:81.25:0,81,1448	1/1:4,15:19:55.85:623,56,0	0/1:6,5:11:1.17:154,0,1	0/0:28,0:28:84.27:0,84,1522	0/0:34,0:34:99:0,102,1898	0/0:31,0:31:90.29:0,90,1595	0/0:31,0:31:90.30:0,90,1649	0/0:24,0:24:72.23:0,72,1311	0/0:24,0:24:69.21:0,69,1252	0/0:15,0:15:42.11:0,42,726	0/0:24,0:24:72.19:0,72,1233	0/0:15,0:15:42.14:0,42,781	0/0:43,0:43:99:0,129,2374	0/0:8,0:8:24.07:0,24,416	0/0:14,0:14:42.13:0,42,724	0/0:24,0:24:69.24:0,69,1273	0/0:22,0:22:66.23:0,66,1217	0/0:26,1:27:36.19:0,36,1269	0/0:33,0:33:99:0,99,1835	0/0:17,0:17:51.17:0,51,951
chr10	66151274	.	G	GATGA	1258.99	PASS	AB=0.737;AC=3;AF=0.054;AN=56;BaseQRankSum=8.394;DP=653;FS=13.009;HRun=0;HaplotypeScore=118.2382;InbreedingCoeff=0.6557;MQ=88.66;MQ0=0;MQRankSum=-7.408;QD=35.97;ReadPosRankSum=0.926;VQSLOD=3.3294;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,108,2192	0/0:10,0:10:30.09:0,30,590	0/0:24,0:24:69.22:0,69,1314	0/0:24,0:24:65.03:0,65,1232	0/0:21,0:21:60.19:0,60,1205	0/0:20,0:20:60.18:0,60,1169	0/0:23,0:23:69.22:0,69,1377	0/0:25,0:25:75.26:0,75,1546	0/0:27,0:27:81.25:0,81,1622	1/1:6,15:21:24.04:1050,24,0	0/1:9,5:14:15.37:315,0,15	0/0:28,0:28:81.28:0,81,1696	0/0:34,0:34:99:0,102,2132	0/0:30,0:30:87.30:0,87,1808	0/0:30,0:30:90.30:0,90,1850	0/0:23,0:23:69.24:0,69,1447	0/0:25,0:25:72.21:0,72,1404	0/0:15,0:15:42.11:0,42,817	0/0:24,0:24:69.18:0,69,1365	0/0:14,0:14:42.14:0,42,879	0/0:42,0:42:99:0,126,2641	0/0:8,0:8:24.07:0,24,466	0/0:14,0:14:39.13:0,39,779	0/0:23,0:23:69.24:0,69,1432	0/0:22,0:22:66.23:0,66,1381	0/0:25,1:26:20.72:0,21,1397	0/0:33,0:33:99:0,99,2029	0/0:17,0:17:51.18:0,51,1069
chr10	66151504	.	T	TTTAA	702.18	PASS	AC=2;AF=0.037;AN=54;BaseQRankSum=-3.027;DP=346;FS=1.186;HRun=0;HaplotypeScore=54.2119;InbreedingCoeff=0.4953;MQ=61.02;MQ0=1;MQRankSum=-0.073;QD=36.96;ReadPosRankSum=0.406;VQSLOD=3.5953;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:36.11:0,36,556	0/0:6,0:6:12.04:0,12,193	./.	0/0:3,0:3:4.25:0,4,31	0/0:18,0:18:33.11:0,33,528	0/0:22,0:22:51.16:0,51,795	0/0:8,0:8:9.03:0,9,145	0/0:45,0:45:51.13:0,51,793	0/0:11,0:11:18.06:0,18,290	0/0:12,0:12:27.08:0,27,412	0/0:11,0:11:24.04:0,24,358	0/0:5,0:5:9.03:0,9,145	0/0:8,0:8:9.03:0,9,145	0/0:4,0:4:9.03:0,9,145	0/0:9,0:9:15.05:0,15,242	0/0:6,0:6:12.04:0,12,193	0/0:25,0:25:60.19:0,60,940	1/1:3,16:19:33.11:796,33,0	0/0:21,0:21:31.38:0,31,506	0/0:7,0:7:12:0,12,163	0/0:5,0:5:9.03:0,9,145	0/0:3,0:3:3.01:0,3,48	0/0:11,0:11:15.05:0,15,242	0/0:2,0:2:3.01:0,3,48	0/0:17,0:17:24.08:0,24,384	0/0:12,0:12:27.09:0,27,435	0/0:16,0:16:21.07:0,21,338	0/0:21,0:21:48.16:0,48,773
chr10	66151832	.	T	TTTC	1662.07	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-6.329;DP=611;FS=2.431;HRun=0;HaplotypeScore=84.6104;InbreedingCoeff=0.9983;MQ=74.49;MQ0=0;MQRankSum=-0.714;QD=48.88;ReadPosRankSum=0.129;VQSLOD=5.4745;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,105,1679	0/0:11,0:11:30.09:0,30,461	0/0:19,0:19:50.63:0,51,737	0/0:11,0:11:24.05:0,24,398	0/0:23,0:23:60.20:0,60,969	0/0:21,0:21:60.20:0,60,970	0/0:22,0:22:60.19:0,60,941	0/0:28,0:28:66.05:0,66,945	0/0:20,0:20:54.18:0,54,850	1/1:2,20:22:57.19:1232,57,0	1/1:1,11:12:29.93:551,30,0	0/0:18,0:18:51.15:0,51,779	0/0:25,0:25:69.21:0,69,1064	0/0:22,0:22:66.21:0,66,1043	0/0:28,0:28:75.24:0,75,1185	0/0:21,0:21:63.20:0,63,992	0/0:31,0:31:93.28:0,93,1429	0/0:26,0:26:72.14:0,72,1058	0/0:30,0:29:81.28:0,81,1297	0/0:12,0:12:36.11:0,36,550	0/0:23,0:23:60.18:0,60,922	0/0:22,0:22:63.19:0,63,973	0/0:15,0:15:39.13:0,39,628	0/0:24,0:24:66.21:0,66,1040	0/0:20,0:20:57.19:0,57,921	0/0:24,0:24:69.23:0,69,1094	0/0:29,0:29:78.24:0,78,1216	0/0:17,0:17:51.08:0,51,733
chr10	66153472	.	G	GATATATATAT	2290.28	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-8.950;DP=426;FS=48.189;HRun=0;HaplotypeScore=268.1011;InbreedingCoeff=0.8039;MQ=51.37;MQ0=0;MQRankSum=-1.656;QD=47.71;ReadPosRankSum=-4.552;VQSLOD=1.2568;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:57.05:0,57,1411	0/0:16,0:16:30.10:0,30,672	0/0:7,0:6:3.01:0,3,40	0/0:8,0:5:5.74:0,6,64	0/0:23,0:23:63.13:0,63,1654	0/0:19,0:19:35.90:0,36,673	0/0:8,0:8:15.05:0,15,345	1/1:25,0:25:66.22:1474,66,0	0/0:13,0:13:36.12:0,36,827	1/1:3,4:9:12.49:305,12,0	1/1:1,3:4:6.02:307,6,0	0/0:10,0:10:27.09:0,27,618	0/0:10,0:10:30.10:0,30,803	0/0:13,0:13:24.08:0,24,552	0/0:18,0:18:45.09:0,45,983	0/0:19,0:19:45.15:0,45,1024	0/0:19,0:19:18.06:0,18,414	1/1:5,0:10:15.05:352,15,0	0/0:16,0:16:31.63:0,32,626	0/0:33,0:33:53.69:0,54,1130	0/0:5,0:4:3.01:0,3,69	0/0:18,0:18:27.09:0,27,621	0/0:10,0:10:21.07:0,21,627	0/0:5,0:5:8.99:0,9,154	0/0:27,0:27:57.20:0,57,1307	0/0:25,0:25:11.23:0,11,886	0/0:24,0:24:60.12:0,60,1327	0/0:9,0:9:11.93:0,12,223
chr10	66153476	.	TATATATA	T	14101.15	PASS	AB=1.000;AC=35;AF=0.625;AN=56;BaseQRankSum=5.229;DP=413;FS=5.768;HRun=0;HaplotypeScore=190.1263;InbreedingCoeff=0.8306;MQ=52.34;MQ0=0;MQRankSum=-8.731;QD=49.30;ReadPosRankSum=5.564;VQSLOD=4.3062;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:57.07:0,57,1880	1/1:1,14:15:30.10:748,30,0	0/0:4,0:3:3.01:0,3,68	0/0:11,0:7:9.03:0,9,171	0/0:24,0:24:69.24:0,69,2524	1/1:1,17:18:36.12:897,36,0	1/1:2,6:8:15.05:374,15,0	0/0:26,0:26:72.25:0,72,1714	1/1:1,12:13:36.12:898,36,0	0/1:6,0:6:27.43:27,0,126	0/0:4,0:4:9.03:0,9,294	1/1:0,10:10:27.09:673,27,0	0/0:11,0:11:33.11:0,33,1249	1/1:1,12:13:24.08:598,24,0	1/1:2,16:18:45.15:1122,45,0	1/1:2,17:19:45.15:1122,45,0	1/1:10,8:18:18.06:449,18,0	0/0:10,0:10:9.94:0,10,205	1/1:2,11:13:33.11:750,33,0	1/1:9,23:32:54.19:1346,54,0	1/1:0,4:3:3.01:75,3,0	1/1:4,12:16:27.09:673,27,0	0/0:10,0:10:24.08:0,24,883	0/0:5,0:5:8.99:0,9,254	1/1:5,22:27:57.20:1397,57,0	1/1:8,16:24:48.16:1156,48,0	1/1:2,21:23:60.21:1496,60,0	1/1:4,5:9:12.04:299,12,0
chr10	66155777	.	TAAAAA	T	672.80	PASS	AB=0.615;AC=3;AF=0.056;AN=54;BaseQRankSum=3.167;DP=451;FS=0.792;HRun=18;HaplotypeScore=91.8576;InbreedingCoeff=0.5775;MQ=67.76;MQ0=3;MQRankSum=-0.897;QD=17.71;ReadPosRankSum=1.809;VQSLOD=-0.0142;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:19:51.15:0,51,918	0/0:9,0:9:24.08:0,24,521	0/0:31,0:14:18.09:0,18,186	0/0:24,0:8:8.89:0,9,97	0/0:12,0:14:26.24:0,26,473	0/0:14,0:15:36.12:0,36,798	0/0:14,0:14:33.09:0,33,678	0/0:22,0:29:48.59:0,49,377	0/0:14,0:14:33.11:0,33,772	1/1:4,9:14:29.72:354,30,0	0/1:9,14:24:25.32:424,0,25	0/0:12,0:13:33.11:0,33,726	0/0:11,0:11:27.09:0,27,544	0/0:9,0:9:24.08:0,24,471	0/0:13,0:17:45.12:0,45,821	0/0:5,0:6:15.05:0,15,281	0/0:25,0:27:66.21:0,66,1394	0/0:5,0:10:26.70:0,27,246	0/0:24,0:26:60.16:0,60,1129	0/0:14,0:15:36.10:0,36,739	0/0:3,0:4:9.03:0,9,170	./.	0/0:6,0:6:15.02:0,15,196	0/0:14,0:14:36.08:0,36,753	0/0:23,0:26:57.19:0,57,1166	0/0:20,0:22:63.16:0,63,1050	0/0:17,0:18:47.80:0,48,889	0/0:16,0:17:39.11:0,39,806
chr10	66156116	.	C	CCA	866.92	PASS	AB=0.929;AC=5;AF=0.093;AN=54;BaseQRankSum=-4.873;DP=407;FS=0.000;HRun=0;HaplotypeScore=51.9084;InbreedingCoeff=0.7635;MQ=68.54;MQ0=0;MQRankSum=-0.423;QD=18.45;ReadPosRankSum=-1.194;VQSLOD=3.2399;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:28:75.06:0,75,907	0/0:5,0:5:15.04:0,15,178	0/0:15,0:14:33.05:0,33,386	0/0:22,0:20:52:0,52,586	0/0:11,0:11:30.10:0,30,379	0/0:16,0:16:39.12:0,39,490	0/0:15,0:15:39.08:0,39,452	0/0:18,0:18:45.13:0,45,553	0/0:10,0:10:27.07:0,27,328	1/1:2,15:17:42.09:608,42,0	1/1:5,12:17:24.08:373,24,0	0/0:10,0:10:21.07:0,21,263	0/0:15,0:16:47.98:0,48,582	0/0:10,0:10:21.07:0,21,265	0/0:11,0:11:24.06:0,24,290	0/0:9,0:9:27.06:0,27,314	0/0:23,0:23:60.19:0,60,753	0/0:14,0:14:33.10:0,33,414	0/0:18,0:18:39.12:0,39,490	0/0:9,0:9:21.07:0,21,264	0/0:33,0:33:81.23:0,81,993	./.	0/0:4,0:4:12.03:0,12,139	0/0:17,0:17:42.13:0,42,525	0/0:12,0:12:30.10:0,30,378	0/1:12,1:13:13.78:14,0,380	0/0:20,0:19:60.16:0,60,727	0/0:11,0:11:30.06:0,30,350
chr10	66156787	.	GA	G	615.29	PASS	AB=0.903;AC=4;AF=0.071;AN=56;BaseQRankSum=8.914;DP=662;FS=0.000;HRun=7;HaplotypeScore=71.1690;InbreedingCoeff=0.6119;MQ=70.56;MQ0=10;MQRankSum=-2.631;QD=10.25;ReadPosRankSum=-0.220;VQSLOD=1.5203;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,153,2103	0/0:9,0:9:24.08:0,24,335	0/0:28,0:13:29.37:0,29,314	0/0:22,0:17:28.21:0,28,362	0/0:31,0:31:87.28:0,87,1198	0/0:22,0:22:63.21:0,63,881	0/0:37,0:37:90.25:0,90,1220	0/0:39,0:39:99:0,114,1552	0/0:19,0:19:54.17:0,54,737	0/1:20,2:22:18.83:327,0,19	0/1:14,2:16:1.41:167,0,1	0/0:21,0:21:63.18:0,63,847	0/0:20,0:20:60.20:0,60,831	0/0:20,0:20:57.18:0,57,779	0/0:22,0:22:63.16:0,63,829	0/0:22,0:22:63.20:0,63,863	0/0:33,0:33:87.29:0,87,1213	1/1:19,3:22:20.42:235,20,0	0/0:22,0:21:60.17:0,60,818	0/0:19,0:19:54.18:0,54,755	0/0:15,0:15:45.12:0,45,608	0/0:13,0:13:36.11:0,36,485	0/0:16,0:16:48.15:0,48,654	0/0:26,0:26:75.22:0,75,1014	0/0:19,0:19:54.11:0,54,717	0/0:35,0:35:99:0,105,1457	0/0:20,0:19:57.19:0,57,797	0/0:21,0:21:63.21:0,63,876
chr10	66156788	.	A	AAAAAG	2210.91	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.530;DP=674;FS=0.565;HRun=0;HaplotypeScore=127.5757;InbreedingCoeff=0.9963;MQ=69.96;MQ0=9;MQRankSum=-1.477;QD=33.50;ReadPosRankSum=-2.254;VQSLOD=2.7917;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,150,2942	0/0:10,0:10:24.08:0,24,461	0/0:25,0:12:29.36:0,29,361	0/0:23,0:18:19.04:0,19,490	0/0:31,0:31:84.29:0,84,1697	0/0:22,0:22:63.22:0,63,1298	0/0:37,0:37:87.36:0,87,1725	0/0:39,0:39:99:0,114,2125	0/0:18,0:18:51.16:0,51,946	1/1:8,16:28:56.44:934,56,0	1/1:2,14:16:26.92:579,27,0	0/0:21,0:21:60.18:0,60,1182	0/0:20,0:20:60.21:0,60,1176	0/0:22,0:22:57.18:0,57,1093	0/0:22,0:22:63.17:0,63,1171	0/0:22,0:22:60.19:0,60,1136	0/0:31,0:31:87.30:0,87,1692	1/1:7,0:22:47.01:841,47,0	0/0:24,0:23:57.19:0,57,1140	0/0:19,0:19:54.19:0,54,1109	0/0:17,0:17:42.14:0,42,879	0/0:13,0:13:36.11:0,36,695	0/0:16,0:16:48.15:0,48,969	0/0:27,0:27:75.20:0,75,1435	0/0:19,0:19:54.18:0,54,1071	0/0:36,0:36:99:0,105,2165	0/0:20,0:19:57.15:0,57,1150	0/0:22,0:22:63.21:0,63,1191
chr10	66157605	.	GA	G	2009.32	PASS	AB=0.890;AC=13;AF=0.232;AN=56;BaseQRankSum=8.932;DP=570;FS=0.403;HRun=11;HaplotypeScore=57.5001;InbreedingCoeff=0.4866;MQ=71.60;MQ0=0;MQRankSum=-1.042;QD=12.48;ReadPosRankSum=-1.569;VQSLOD=2.9146;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,2:26:41.53:0,42,646	0/0:10,0:10:27.05:0,27,280	0/1:12,1:11:24.06:24,0,67	0/1:11,0:9:16.55:17,0,60	0/0:29,0:32:72.50:0,72,787	0/0:21,1:22:38.48:0,38,603	0/1:8,2:10:19.21:19,0,226	1/1:10,23:33:39.87:531,40,0	0/0:15,0:15:45.07:0,45,463	1/1:3,33:36:95.84:783,96,0	1/1:2,17:20:52.97:424,53,0	0/0:17,0:18:47.95:0,48,493	0/0:24,0:25:72:0,72,741	0/0:13,1:15:17.28:0,17,360	0/0:17,0:17:48.12:0,48,511	0/0:25,0:26:71.99:0,72,737	0/0:20,0:20:45.11:0,45,480	1/1:1,15:16:41.95:345,42,0	0/0:18,0:18:39.08:0,39,406	0/0:26,0:28:68.87:0,69,694	0/1:8,2:10:22.22:22,0,197	0/0:20,0:20:51.11:0,51,529	0/0:27,0:26:66.14:0,66,688	0/1:9,2:12:22.37:22,0,175	0/0:23,1:24:42.77:0,43,650	0/0:26,0:26:66.14:0,66,684	0/0:30,0:34:77.69:0,78,756	0/0:6,0:6:6.02:0,6,64
chr10	66158465	.	TGGCTGTGCAAA	T	578.56	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.774;DP=714;FS=0.000;HRun=0;HaplotypeScore=223.9454;InbreedingCoeff=0.9868;MQ=83.58;MQ0=1;MQRankSum=-4.134;QD=41.33;ReadPosRankSum=2.026;VQSLOD=2.8521;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:56:99:0,166,9095	0/0:7,0:7:21.06:0,21,1091	0/0:26,0:25:72.23:0,72,2769	0/0:22,0:22:58.85:0,59,1923	0/0:30,0:30:90.29:0,90,5046	0/0:24,0:24:72.22:0,72,3763	0/0:38,0:38:99:0,114,6442	0/0:27,0:27:81.26:0,81,3918	0/0:14,0:14:42.14:0,42,2401	0/0:25,0:25:75.25:0,75,3959	0/0:32,0:32:86.81:0,87,4726	0/0:32,0:32:90.30:0,90,5029	0/0:15,0:15:45.10:0,45,2482	0/0:20,0:20:57.20:0,57,3193	0/0:27,0:27:81.28:0,81,4742	0/0:26,0:26:75.26:0,75,4285	0/0:35,0:35:99:0,105,6219	1/1:0,14:14:18.06:669,18,0	0/0:21,0:21:60.21:0,60,3245	0/0:13,0:13:39.12:0,39,2159	0/0:41,0:41:99:0,123,6243	0/0:14,0:14:42.13:0,42,2293	0/0:21,0:21:63.20:0,63,3343	0/0:33,0:33:99:0,99,5489	0/0:25,0:25:75.26:0,75,4388	0/0:37,0:37:99:0,111,6248	0/0:30,0:30:90.31:0,90,5219	0/0:9,0:9:27.09:0,27,1531
chr10	66159174	.	G	GA	1594.16	PASS	AC=4;AF=0.074;AN=54;BaseQRankSum=-5.978;DP=523;FS=13.748;HRun=6;HaplotypeScore=52.3246;InbreedingCoeff=0.9433;MQ=77.29;MQ0=0;MQRankSum=0.603;QD=31.88;ReadPosRankSum=0.705;VQSLOD=2.8162;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,117,1193	0/0:13,0:13:36.08:0,36,367	0/0:11,0:12:23.26:0,23,220	0/0:9,0:10:6.21:0,6,69	0/0:41,0:41:99:0,108,1102	0/0:26,0:26:75.13:0,75,750	0/0:8,0:8:21.05:0,21,214	0/0:16,0:16:39.07:0,39,392	0/0:17,0:17:51.10:0,51,512	1/1:2,30:32:90.29:1132,90,0	1/1:0,18:18:48.07:583,48,0	0/0:18,0:18:48.11:0,48,490	0/0:19,0:19:51.11:0,51,520	0/0:15,0:15:45.09:0,45,452	0/0:13,0:13:36.07:0,36,360	0/0:13,0:13:36.08:0,36,367	0/0:24,0:24:72.05:0,72,713	./.	0/0:24,0:24:63.14:0,63,642	0/0:28,0:28:72.16:0,72,732	0/0:12,0:12:36.08:0,36,367	0/0:19,0:19:57.13:0,57,581	0/0:13,0:13:36.08:0,36,367	0/0:7,0:7:21.05:0,21,214	0/0:22,0:22:54.12:0,54,551	0/0:21,1:22:22.39:0,22,544	0/0:22,0:22:60.12:0,60,604	0/0:17,0:17:51.12:0,51,520
chr10	66161217	.	C	CAG	8308.52	PASS	AB=0.757;AC=26;AF=0.464;AN=56;BaseQRankSum=0.268;DP=630;FS=2.487;HRun=0;HaplotypeScore=128.1226;InbreedingCoeff=0.0056;MQ=60.79;MQ0=12;MQRankSum=1.363;QD=19.74;ReadPosRankSum=8.517;VQSLOD=4.8246;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:75.06:0,75,854	0/1:4,3:7:8.36:132,0,8	0/0:31,0:16:41.95:0,42,433	0/0:29,0:18:33.98:0,34,334	0/0:19,0:19:44.93:0,45,562	0/1:24,6:30:99:678,0,110	0/1:7,18:25:65.54:101,0,66	0/0:21,0:19:12.91:0,13,309	0/1:17,1:18:92.30:345,0,92	1/1:22,3:25:65.18:579,65,0	1/1:8,3:11:20.99:222,21,0	1/1:17,4:21:54.02:602,54,0	0/0:19,0:19:50.77:0,51,563	0/1:16,5:22:9.37:496,0,9	1/1:2,18:21:21.95:331,22,0	1/1:18,11:29:55.06:995,55,0	0/1:8,14:22:2.25:300,0,2	1/1:8,0:8:1.52:58,2,0	0/1:12,3:14:48.45:246,0,48	0/1:15,4:19:99:233,0,126	0/1:35,3:38:54.40:581,0,54	0/1:6,3:9:28.58:151,0,29	0/0:15,0:15:43.65:0,44,487	0/0:43,1:43:99:0,110,1225	0/1:12,6:18:22.64:425,0,23	0/1:14,18:32:99:619,0,143	0/1:26,11:37:99:953,0,127	0/1:6,8:13:59.85:262,0,60
chr10	66161245	.	C	CAA	7604.92	PASS	AB=0.857;AC=37;AF=0.661;AN=56;BaseQRankSum=1.931;DP=619;FS=0.368;HRun=6;HaplotypeScore=143.3030;InbreedingCoeff=0.8445;MQ=55.79;MQ0=26;MQRankSum=0.201;QD=19.40;ReadPosRankSum=-5.647;VQSLOD=0.7252;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:63.01:0,63,639	1/1:9,2:11:23.20:254,23,0	0/0:36,0:13:31.83:0,32,292	0/0:22,0:9:8.03:0,8,84	0/0:29,0:29:74.20:0,74,704	1/1:26,3:29:34.39:652,34,0	1/1:10,1:11:9.45:157,9,0	1/1:22,0:21:61.24:544,61,0	1/1:18,1:18:15.02:237,15,0	0/0:20,0:27:1.82:0,2,188	1/1:14,0:15:8.77:54,9,0	1/1:10,2:12:23.95:259,24,0	0/0:20,0:20:53.39:0,53,498	1/1:12,6:18:27.04:383,27,0	1/1:16,6:22:34.49:369,34,0	1/1:14,11:24:59.91:684,60,0	1/1:14,5:19:41.28:470,41,0	0/0:10,0:10:8.83:0,9,60	1/1:21,2:21:29.64:427,30,0	1/1:22,2:24:14.71:326,15,0	1/1:26,2:28:41.26:405,41,0	1/1:15,1:16:23.98:317,24,0	0/0:14,0:14:35.82:0,36,359	0/0:37,0:36:92.65:0,93,935	1/1:13,6:19:52.30:556,52,0	0/1:25,5:29:17.22:407,0,17	1/1:25,9:34:27.37:759,27,0	1/1:9,6:14:28.36:345,28,0
chr10	66161259	.	ATC	A	1151.02	PASS	AB=0.888;AC=22;AF=0.393;AN=56;BaseQRankSum=5.122;DP=552;FS=8.854;HRun=0;HaplotypeScore=148.0973;InbreedingCoeff=-0.0532;MQ=63.39;MQ0=10;MQRankSum=-2.732;QD=3.22;ReadPosRankSum=-0.585;VQSLOD=2.1692;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,1:28:13.60:0,14,612	0/1:12,1:13:40.17:40,0,278	0/0:26,0:12:8.83:0,9,70	0/0:31,0:17:28.38:0,28,271	0/1:23,3:26:46.29:46,0,638	0/1:21,3:24:61.29:61,0,445	0/0:11,0:11:18.06:0,18,279	1/1:16,13:29:42.25:430,42,0	0/0:14,0:14:30.56:0,31,443	1/1:10,0:26:31.25:153,31,0	1/1:3,0:17:25.57:126,26,0	0/1:4,2:6:35.52:60,0,36	0/1:15,4:19:87.60:88,0,298	0/0:14,0:15:9.98:0,10,302	0/1:13,0:12:6.85:7,0,128	0/1:19,1:21:15.30:15,0,380	0/1:17,1:18:7.40:7,0,344	1/1:2,0:8:8.52:42,9,0	0/1:15,1:16:10.41:10,0,275	0/1:17,2:20:49.96:50,0,313	0/1:20,5:25:64.34:64,0,412	0/0:16,0:16:30.10:0,30,460	0/1:9,3:13:35.98:36,0,313	0/1:33,3:35:30.04:30,0,517	0/0:14,0:15:12.94:0,13,358	0/0:23,0:23:36.12:0,36,541	0/1:24,3:27:64.26:64,0,386	0/0:15,0:15:21.06:0,21,325
chr10	66486649	.	CGAATGAT	C	1099.65	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.666;DP=486;FS=0.000;HRun=0;HaplotypeScore=199.5660;InbreedingCoeff=0.9537;MQ=66.70;MQ0=0;MQRankSum=-5.870;QD=61.09;ReadPosRankSum=-1.764;VQSLOD=2.9747;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,117,4229	0/0:8,0:8:24.08:0,24,839	0/0:6,0:6:12.04:0,12,363	0/0:10,0:10:21.07:0,21,583	1/1:4,14:18:48.64:1195,49,0	0/0:13,0:13:39.13:0,39,1505	0/0:18,0:18:42.14:0,42,1461	0/0:19,0:19:54.17:0,54,1637	0/0:22,0:22:57.18:0,57,1863	0/0:15,0:15:45.15:0,45,1523	0/0:22,0:21:45.15:0,45,1540	0/0:15,0:15:42.14:0,42,1504	0/0:22,0:22:66.21:0,66,2143	0/0:17,0:17:42.14:0,42,1456	0/0:18,0:18:42.14:0,42,1459	0/0:21,0:21:54.17:0,54,1864	0/0:19,0:19:57.20:0,57,2064	0/0:8,0:8:18.06:0,18,672	0/0:24,0:24:69.22:0,69,2161	0/0:21,0:21:57.19:0,57,2053	0/0:9,0:9:24.07:0,24,750	0/0:14,0:14:33.11:0,33,1272	0/0:11,0:11:27.09:0,27,904	0/0:19,0:19:54.18:0,54,1829	0/0:20,0:20:57.19:0,57,2006	0/0:20,0:20:60.21:0,60,2141	0/0:23,0:23:45.15:0,45,1565	0/0:11,0:11:33.11:0,33,1199
chr10	66486673	.	G	GA	7400.61	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-2.191;DP=465;FS=2.056;HRun=1;HaplotypeScore=159.6640;InbreedingCoeff=0.9208;MQ=56.08;MQ0=0;MQRankSum=-4.956;QD=21.90;ReadPosRankSum=-1.940;VQSLOD=4.3364;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:97.73:0,98,472	0/0:6,0:6:15.55:0,16,75	0/0:7,0:7:9.77:0,10,64	0/0:7,0:7:5.80:0,6,74	1/1:5,2:22:45.63:273,46,0	1/1:7,8:15:13.96:281,14,0	1/1:1,13:13:30.08:359,30,0	1/1:9,9:18:40.42:447,40,0	1/1:1,18:19:26.83:399,27,0	1/1:3,12:15:36:441,36,0	1/1:3,15:18:27.85:432,28,0	1/1:3,10:14:6.30:351,6,0	0/0:17,0:17:32.89:0,33,156	1/1:3,13:16:26.93:439,27,0	1/1:1,17:18:33.10:396,33,0	1/1:4,13:18:31.38:383,31,0	1/1:7,13:20:39.66:437,40,0	1/1:3,10:13:12.78:248,13,0	1/1:12,7:19:25.40:307,25,0	1/1:6,13:20:29.25:526,29,0	1/1:5,6:11:20.65:234,21,0	0/0:17,0:17:12.73:0,13,129	0/0:9,0:9:16.09:0,16,70	0/0:18,0:18:7.21:0,7,121	1/1:5,9:15:36.31:405,36,0	1/1:10,10:20:28.95:412,29,0	1/1:4,20:24:36.58:445,37,0	1/1:4,5:9:15.05:186,15,0
chr10	66486674	.	AC	A	3006.73	PASS	AB=0.930;AC=47;AF=0.839;AN=56;BaseQRankSum=6.358;DP=459;FS=4.719;HRun=1;HaplotypeScore=170.5051;InbreedingCoeff=0.1584;MQ=56.27;MQ0=0;MQRankSum=-3.142;QD=7.28;ReadPosRankSum=-3.007;VQSLOD=-0.2781;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,1:46:23.23:0,23,343	0/1:5,1:6:21.90:22,0,46	0/1:6,1:7:56.90:57,0,59	0/1:6,0:7:49.70:50,0,84	1/1:21,0:21:35.90:137,36,0	1/1:15,0:15:20.40:149,20,0	1/1:14,0:13:27.83:137,28,0	1/1:18,0:18:32.16:157,32,0	1/1:19,0:19:15.71:118,16,0	1/1:15,0:15:35.28:172,35,0	1/1:18,0:18:27.10:139,27,0	1/1:14,0:14:2.69:73,3,0	0/1:17,0:17:10.93:11,0,100	1/1:16,0:16:25.69:134,26,0	1/1:18,0:18:25.93:119,26,0	1/1:18,0:18:27.23:113,27,0	1/1:20,0:20:40.81:225,41,0	1/1:12,0:12:12.37:73,12,0	1/1:16,0:16:33.92:172,34,0	1/1:19,0:19:32.13:221,32,0	1/1:11,0:11:20.82:110,21,0	0/1:16,0:16:0.51:1,0,88	0/1:8,1:9:36.19:41,0,36	0/1:18,0:18:50.22:50,0,93	1/1:16,0:16:36.93:185,37,0	1/1:20,1:21:36.13:274,36,0	1/1:23,0:23:30.42:114,30,0	1/1:9,0:9:21.10:106,21,0
chr10	66486917	.	GCATGCCTTTAATTC	G	707.46	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=0.599;DP=462;FS=4.009;HRun=0;HaplotypeScore=265.0439;InbreedingCoeff=0.6962;MQ=59.66;MQ0=1;MQRankSum=-0.491;QD=24.40;ReadPosRankSum=-4.999;VQSLOD=1.8754;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:80.71:0,81,4493	0/0:5,0:5:12.04:0,12,743	0/0:16,0:12:25.97:0,26,1253	0/0:12,0:11:30.10:0,30,1394	0/0:21,0:21:48.15:0,48,2347	0/0:19,0:19:23.37:0,23,2741	0/0:13,0:13:33.11:0,33,1882	1/1:14,6:20:24.42:800,24,0	0/0:25,0:25:69.24:0,69,4113	0/0:16,0:16:48.11:0,48,2584	0/0:16,0:16:12.13:0,12,1760	0/0:19,0:19:46.04:0,46,2611	0/0:13,0:13:14.22:0,14,2213	0/0:17,0:17:45.15:0,45,2607	0/0:12,0:12:36.12:0,36,2106	0/0:11,0:11:33.11:0,33,2046	0/0:25,0:25:66.58:0,67,3848	0/0:25,0:25:62.18:0,62,3170	0/0:14,0:13:26.54:0,27,1401	0/0:23,0:23:63.22:0,63,3370	0/0:21,0:21:53.65:0,54,2990	0/0:9,0:9:27.09:0,27,1532	0/1:9,0:9:1.30:1,0,1004	0/0:23,0:23:65.67:0,66,3742	0/0:12,0:12:24.08:0,24,1317	0/0:19,0:19:46.96:0,47,2894	0/0:12,0:12:30.10:0,30,1809	0/0:4,0:4:12.04:0,12,743
chr10	66487128	.	T	TC	12754.22	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=10.572;DP=471;FS=8.174;HRun=0;HaplotypeScore=110.3937;InbreedingCoeff=0.9430;MQ=46.63;MQ0=6;MQRankSum=-6.565;QD=37.29;ReadPosRankSum=0.057;VQSLOD=3.8668;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,24:25:57.19:885,57,0	1/1:0,9:9:24.08:369,24,0	0/0:12,0:2:2.64:0,3,42	0/0:20,0:5:15.04:0,15,195	1/1:2,26:28:60.05:873,60,0	1/1:2,10:12:30.03:445,30,0	1/1:0,15:15:33.11:519,33,0	0/0:29,0:29:87.22:0,87,1159	1/1:1,18:19:48.15:725,48,0	1/1:5,14:19:42.06:617,42,0	1/1:2,12:13:33.11:524,33,0	1/1:0,19:19:48.16:758,48,0	0/0:12,0:12:36.12:0,36,501	1/1:2,12:14:42.12:614,42,0	1/1:0,15:15:45.15:686,45,0	1/1:0,11:11:33.11:523,33,0	1/1:5,22:26:69.17:1062,69,0	1/1:1,9:10:30.10:459,30,0	1/1:1,14:15:35.96:569,36,0	1/1:2,13:15:33.11:515,33,0	1/1:1,12:13:29.77:436,30,0	0/0:16,0:16:48.13:0,48,637	0/0:21,0:21:63.19:0,63,857	0/0:18,1:19:54.16:0,54,735	1/1:2,18:19:36.12:571,36,0	1/1:2,22:24:69.17:1042,69,0	1/1:0,13:13:29.69:469,30,0	1/1:0,4:4:6.02:96,6,0
chr10	66487150	.	AAGAAAGAAAG	A	6901.25	PASS	AB=1.000;AC=43;AF=0.768;AN=56;BaseQRankSum=11.758;DP=370;FS=3.627;HRun=0;HaplotypeScore=161.4015;InbreedingCoeff=0.7800;MQ=41.38;MQ0=6;MQRankSum=-7.507;QD=25.10;ReadPosRankSum=0.576;VQSLOD=3.9822;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:22:90.11:355,0,90	1/1:6,0:6:12.51:208,13,0	1/1:9,0:1:0.89:2,1,0	0/0:9,0:3:6.02:0,6,66	1/1:21,0:21:11.88:272,12,0	1/1:16,1:17:35.28:621,35,0	1/1:9,1:10:19.01:240,19,0	0/0:28,0:28:49.32:0,49,484	1/1:17,0:17:24:422,24,0	1/1:18,0:18:47.90:701,48,0	1/1:14,1:14:24.93:220,25,0	1/1:8,0:8:23.04:371,23,0	0/0:10,0:9:27.09:0,27,974	1/1:9,0:9:22.48:281,22,0	1/1:9,0:9:26.56:436,27,0	1/1:8,0:8:19.01:208,19,0	1/1:15,1:15:33.89:524,34,0	1/1:8,0:8:13.75:92,14,0	1/1:14,0:14:14.19:173,14,0	1/1:17,0:17:36.91:439,37,0	1/1:6,0:6:6.85:87,7,0	0/0:12,0:12:36.11:0,36,1054	0/0:23,0:22:60.18:0,60,2099	0/0:13,0:13:39.12:0,39,1216	1/1:14,0:13:22.02:281,22,0	1/1:17,0:17:22.25:540,22,0	1/1:11,0:11:10.32:418,10,0	1/1:1,0:1:2.60:10,3,0
chr10	66487151	.	AGAAAGAAAG	A	11933.70	PASS	AB=0.759;AC=41;AF=0.732;AN=56;BaseQRankSum=10.239;DP=372;FS=4.384;HRun=0;HaplotypeScore=138.7495;InbreedingCoeff=0.7871;MQ=41.64;MQ0=6;MQRankSum=-9.164;QD=44.53;ReadPosRankSum=-0.316;VQSLOD=4.4769;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:15,0:21:20.67:494,0,21	1/1:2,0:6:12.51:264,13,0	0/0:9,0:1:2.84:0,3,14	0/0:8,0:3:6.02:0,6,72	1/1:5,0:21:26.85:452,27,0	1/1:1,12:17:36.12:940,36,0	1/1:5,0:10:27.09:470,27,0	0/0:29,0:29:3.61:0,4,222	1/1:1,12:17:27.06:686,27,0	1/1:0,13:18:51.01:1025,51,0	1/1:1,9:14:27.05:398,27,0	1/1:1,5:8:24.07:594,24,0	0/0:10,0:9:27.09:0,27,920	1/1:1,5:9:24.03:472,24,0	1/1:4,5:10:30.09:694,30,0	1/1:1,2:7:21.07:399,21,0	1/1:6,6:16:42.14:932,42,0	1/1:4,1:8:21.05:317,21,0	1/1:2,7:13:27.11:494,27,0	1/1:4,7:17:39.05:748,39,0	1/1:2,2:7:14.49:219,14,0	0/0:12,0:12:36.12:0,36,1009	0/0:21,0:21:60.20:0,60,1962	0/0:13,0:13:39.13:0,39,1146	1/1:5,3:14:27.09:556,27,0	1/1:9,6:18:46.55:1022,47,0	1/1:2,6:11:21.64:715,22,0	1/1:0,0:1:3.01:41,3,0
chr10	66487153	.	AAAGAAAG	A	5219.82	PASS	AB=0.925;AC=39;AF=0.696;AN=56;BaseQRankSum=6.962;DP=378;FS=0.000;HRun=0;HaplotypeScore=152.1438;InbreedingCoeff=0.5423;MQ=41.62;MQ0=6;MQRankSum=-5.099;QD=18.51;ReadPosRankSum=0.574;VQSLOD=4.0993;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:17,7:23:99:385,0,104	1/1:2,4:6:12.04:221,12,0	1/1:8,0:1:3:27,3,0	0/0:7,0:2:3.01:0,3,36	0/1:21,0:21:9.25:105,0,9	1/1:16,1:17:27.61:487,28,0	1/1:10,0:10:9.80:164,10,0	0/0:29,0:29:19.18:0,19,431	1/1:17,0:17:19.74:342,20,0	1/1:18,0:18:26.15:446,26,0	1/1:15,0:14:6.73:106,7,0	1/1:10,0:10:21.42:334,21,0	0/0:10,0:9:27.07:0,27,771	1/1:9,0:9:8.28:175,8,0	1/1:10,0:10:22.75:359,23,0	1/1:7,0:7:4.33:120,4,0	1/1:17,0:16:26.96:416,27,0	1/1:8,0:8:2.58:41,3,0	0/1:13,0:13:40.30:60,0,40	1/1:17,0:17:16.61:310,17,0	1/1:8,0:8:5.84:114,6,0	0/0:14,0:14:42.14:0,42,1001	0/0:22,0:21:60.18:0,60,1733	0/0:13,0:13:39.13:0,39,977	1/1:16,0:15:12.82:267,13,0	1/1:19,1:19:11.32:435,11,0	1/1:11,0:11:6.98:307,7,0	0/0:1,0:1:0.89:0,1,2
chr10	66487155	.	AG	A	1293.42	PASS	AB=1.000;AC=37;AF=0.661;AN=56;BaseQRankSum=11.732;DP=368;FS=3.628;HRun=1;HaplotypeScore=124.3417;InbreedingCoeff=0.3763;MQ=41.83;MQ0=6;MQRankSum=-8.110;QD=4.37;ReadPosRankSum=1.510;VQSLOD=0.5821;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:24:79.92:80,0,122	1/1:5,0:5:9.08:38,9,0	0/1:8,0:1:0:0,0,0	0/0:5,0:1:3.01:0,3,42	1/1:15,3:19:20.47:306,20,0	1/1:17,0:17:27.04:106,27,0	1/1:9,1:10:13.74:53,14,0	0/1:29,0:29:62.79:63,0,384	1/1:16,0:16:15.51:49,16,0	1/1:18,0:18:23.88:111,24,0	1/1:15,0:14:13.91:62,14,0	1/1:10,0:10:24.44:117,24,0	0/0:10,0:9:27.07:0,27,387	1/1:8,0:8:14.12:53,14,0	1/1:9,0:9:20.52:80,21,0	1/1:7,0:7:11.61:46,12,0	1/1:17,0:16:0.93:41,1,0	0/0:7,0:7:4.70:0,5,28	0/1:13,0:13:20.38:20,0,38	0/1:16,0:17:6.53:62,0,7	1/1:8,0:8:4.99:19,5,0	0/0:14,0:14:42.09:0,42,548	0/0:23,0:22:61.03:0,61,844	0/0:13,0:13:39.13:0,39,573	1/1:15,1:15:18.28:74,18,0	0/1:18,0:17:30.37:46,0,30	0/1:10,0:10:11.64:45,0,12	1/1:1,0:1:0.47:1,0,0
chr10	66487306	.	C	CA	12147.42	PASS	AB=1.000;AC=44;AF=0.786;AN=56;BaseQRankSum=4.648;DP=539;FS=12.346;HRun=7;HaplotypeScore=71.9720;InbreedingCoeff=0.8428;MQ=78.42;MQ0=0;MQRankSum=-1.820;QD=28.05;ReadPosRankSum=4.976;VQSLOD=4.5440;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,18:18:45.14:543,45,0	1/1:2,10:12:24.07:290,24,0	0/1:15,0:15:1.04:1,0,86	0/1:15,0:15:13.51:14,0,170	1/1:5,30:34:78.19:919,78,0	1/1:2,19:21:54.17:652,54,0	1/1:1,13:14:36.11:435,36,0	0/0:35,0:35:84.12:0,84,807	1/1:2,18:20:51.16:616,51,0	1/1:1,23:24:69.18:809,69,0	1/1:1,15:16:42.13:507,42,0	1/1:0,14:14:42.13:507,42,0	0/0:16,0:16:45.03:0,45,426	1/1:1,13:14:39.12:471,39,0	1/1:1,13:14:33.10:399,33,0	1/1:2,11:13:30.09:362,30,0	1/1:1,17:18:48.15:580,48,0	1/1:2,18:20:51.16:616,51,0	1/1:4,8:12:27.04:293,27,0	1/1:2,27:29:78.20:926,78,0	1/1:0,12:12:33.10:399,33,0	0/0:18,0:18:48.06:0,48,459	0/0:18,0:18:51.08:0,51,492	0/0:19,0:19:51.08:0,51,492	1/1:3,23:26:57.17:689,57,0	1/1:1,27:28:81.25:976,81,0	1/1:4,22:27:60.18:724,60,0	1/1:1,14:15:36.08:420,36,0
chr10	66487371	.	TC	T	1099.90	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=1.950;DP=541;FS=0.716;HRun=1;HaplotypeScore=67.9430;InbreedingCoeff=0.9863;MQ=92.35;MQ0=0;MQRankSum=0.973;QD=37.93;ReadPosRankSum=-4.524;VQSLOD=2.2826;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:51.17:0,51,814	0/0:7,0:7:18.06:0,18,287	0/0:28,0:28:80.82:0,81,1197	0/0:18,0:18:51.17:0,51,798	0/0:32,0:32:81.26:0,81,1254	0/0:34,0:34:99:0,99,1562	0/0:20,0:20:60.17:0,60,911	1/1:0,29:29:87.28:1195,87,0	0/0:13,0:13:39.13:0,39,620	0/0:26,0:26:78.26:0,78,1224	0/0:19,0:19:54.18:0,54,845	0/0:20,0:20:60.16:0,60,911	0/0:22,0:22:66.21:0,66,1022	0/0:11,0:11:30.10:0,30,479	0/0:21,0:21:60.20:0,60,940	0/0:18,0:18:54.18:0,54,853	0/0:17,0:17:51.17:0,51,814	0/0:13,0:13:39.11:0,39,597	0/0:12,0:12:36.12:0,36,575	0/0:19,0:19:57.19:0,57,909	0/0:17,0:17:51.17:0,51,815	0/0:14,0:14:42.14:0,42,671	0/0:15,0:15:45.15:0,45,719	0/0:23,0:23:69.19:0,69,1069	0/0:9,0:9:21.07:0,21,336	0/0:27,0:27:81.27:0,81,1268	0/0:28,0:27:78.20:0,78,1141	0/0:9,0:9:27.09:0,27,431
chr10	66487650	.	C	CT	4264.15	PASS	AB=0.675;AC=36;AF=0.643;AN=56;BaseQRankSum=2.507;DP=692;FS=8.403;HRun=15;HaplotypeScore=115.8281;InbreedingCoeff=0.5127;MQ=78.79;MQ0=7;MQRankSum=-2.578;QD=9.39;ReadPosRankSum=0.465;VQSLOD=3.1979;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,20:32:34.08:345,34,0	1/1:2,4:7:8.83:65,9,0	0/0:60,0:28:24.67:0,25,139	0/0:62,0:29:11.58:0,12,97	1/1:37,1:45:54.49:289,54,0	1/1:11,9:22:26.64:260,27,0	1/1:4,11:15:20.98:176,21,0	0/0:23,1:27:15.57:0,16,189	1/1:6,10:18:11.67:183,12,0	1/1:10,14:25:24.26:299,24,0	1/1:5,12:18:15.60:211,16,0	1/1:4,16:22:8.61:155,9,0	0/0:16,0:17:5.11:0,5,114	1/1:16,4:21:19.76:229,20,0	0/1:15,12:28:32.31:155,0,32	1/1:9,18:29:17.80:356,18,0	0/1:7,11:19:5.93:158,0,6	1/1:2,12:14:18.09:259,18,0	0/1:15,3:19:9.58:148,0,10	1/1:16,5:22:20.48:238,20,0	1/1:3,7:10:11.99:101,12,0	0/0:21,3:25:7.47:0,7,260	0/0:17,0:19:15.97:0,16,179	0/0:22,0:24:31.62:0,32,289	0/1:6,10:18:9.37:128,0,9	0/1:11,16:28:0.39:288,0,0	0/1:15,14:30:71.96:121,0,72	1/1:3,8:11:11.99:101,12,0
chr10	66488140	.	C	CAT	3173.07	PASS	AB=1.000;AC=53;AF=0.981;AN=54;DP=168;FS=0.000;HRun=0;HaplotypeScore=211.3107;InbreedingCoeff=0.1389;MQ=36.52;MQ0=0;QD=18.89;VQSLOD=3.4089;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,0:8:15.01:155,15,0	1/1:5,0:5:5.60:26,6,0	./.	0/1:1,0:1:0:0,0,0	1/1:10,0:10:23.98:219,24,0	1/1:3,0:3:8.99:84,9,0	1/1:5,0:5:14.97:130,15,0	1/1:7,0:7:12:120,12,0	1/1:8,0:8:8.97:70,9,0	1/1:7,0:7:15.01:145,15,0	1/1:9,0:9:15.45:141,15,0	1/1:4,0:4:8.98:72,9,0	1/1:6,1:7:20.97:199,21,0	1/1:4,0:4:12.01:120,12,0	1/1:3,0:3:6:59,6,0	1/1:10,1:11:17.92:146,18,0	1/1:7,0:7:11.98:116,12,0	1/1:3,0:3:2.99:24,3,0	1/1:1,0:1:3:25,3,0	1/1:10,1:11:20.99:196,21,0	1/1:2,0:2:6.02:75,6,0	1/1:6,0:6:11.98:108,12,0	1/1:3,0:3:9.03:107,9,0	1/1:3,1:4:8.99:80,9,0	1/1:7,0:7:20.88:244,21,0	1/1:17,0:17:44.95:384,45,0	1/1:9,0:9:14.76:166,15,0	1/1:6,0:6:6.76:39,7,0
chr10	66492209	.	GCA	G	40.64	PASS	AB=0.667;AC=9;AF=0.90;AN=10;DP=115;FS=0.000;HRun=0;HaplotypeScore=11.1121;MQ=6.81;MQ0=108;QD=2.14;VQSLOD=0.4987;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	1/1:3,2:2:6:53,6,0	./.	./.	./.	./.	./.	1/1:1,1:1:2.98:22,3,0	./.	./.	./.	./.	./.	./.	./.	./.	1/1:1,1:1:2.98:21,3,0	./.	0/1:1,1:1:0:0,0,0	./.	./.	./.	1/1:7,1:1:2.60:10,3,0	./.	./.
chr10	66492327	.	CA	C	386.54	PASS	AC=16;AF=0.800;AN=20;BaseQRankSum=1.826;DP=51;FS=20.792;HRun=2;HaplotypeScore=43.4328;InbreedingCoeff=0.3271;MQ=53.18;MQ0=25;MQRankSum=-0.079;QD=25.77;ReadPosRankSum=1.350;VQSLOD=1.9757;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:13,0:2:3.01:0,3,35	0/0:14,0:2:3.01:0,3,42	./.	./.	./.	./.	./.	1/1:0,1:1:2.96:19,3,0	1/1:0,2:2:6.01:67,6,0	./.	1/1:0,1:1:3.01:39,3,0	1/1:0,1:1:3.01:39,3,0	./.	./.	1/1:0,1:1:3.01:39,3,0	./.	./.	1/1:0,2:2:6:63,6,0	./.	1/1:0,3:3:9.02:106,9,0	1/1:1,3:4:9.02:103,9,0	./.	./.	./.	./.	./.
chr10	66492348	.	A	AGCC	515.35	PASS	AC=18;AF=0.900;AN=20;BaseQRankSum=1.531;DP=32;FS=0.000;HRun=0;HaplotypeScore=49.4889;InbreedingCoeff=0.1254;MQ=80.67;MQ0=6;MQRankSum=1.531;QD=25.77;ReadPosRankSum=0.919;VQSLOD=3.0459;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	./.	1/1:5,0:2:2.92:17,3,0	0/0:10,0:4:1.06:0,1,53	./.	./.	./.	./.	./.	1/1:0,1:1:3.01:31,3,0	1/1:0,2:2:6.02:82,6,0	./.	1/1:0,1:1:3.01:48,3,0	1/1:0,1:1:3.01:48,3,0	./.	./.	1/1:0,1:1:3.01:49,3,0	./.	./.	1/1:0,2:2:6.02:81,6,0	./.	1/1:0,3:3:9.03:131,9,0	1/1:0,4:4:8.67:108,9,0	./.	./.	./.	./.	./.
chr10	66492349	.	A	AG	187.40	PASS	AB=0.700;AC=18;AF=0.750;AN=24;BaseQRankSum=-1.108;DP=47;FS=0.000;HRun=0;HaplotypeScore=92.1775;InbreedingCoeff=0.1662;MQ=68.59;MQ0=6;MQRankSum=-0.448;QD=5.06;ReadPosRankSum=3.465;VQSLOD=3.4101;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:4,0:2:1.55:0,2,4	0/1:8,0:4:1.90:2,0,35	./.	./.	./.	./.	./.	1/1:1,1:2:0.89:3,1,0	1/1:0,2:2:5.73:33,6,0	./.	1/1:0,1:1:2.98:22,3,0	1/1:0,1:1:2.98:22,3,0	./.	./.	1/1:0,1:1:2.99:23,3,0	./.	./.	1/1:6,2:8:0.57:43,1,0	./.	1/1:5,2:8:7.74:66,8,0	0/1:0,4:4:0.16:35,0,0	1/1:1,0:1:2.98:21,3,0	./.	./.	0/0:1,0:1:1.55:0,2,4	./.
chr10	66492370	.	G	GT	317.41	PASS	AC=22;AF=0.917;AN=24;BaseQRankSum=1.809;DP=39;FS=11.903;HRun=2;HaplotypeScore=55.1021;InbreedingCoeff=0.2585;MQ=48.70;MQ0=1;MQRankSum=2.292;QD=10.24;ReadPosRankSum=0.683;VQSLOD=0.1438;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	0/0:4,0:3:5.60:0,6,43	./.	./.	./.	./.	./.	1/1:0,2:2:2.78:18,3,0	1/1:0,3:3:7.97:40,8,0	./.	1/1:0,1:1:2.74:12,3,0	1/1:0,1:1:2.74:12,3,0	./.	./.	1/1:0,1:1:2.88:15,3,0	./.	1/1:0,1:1:2.96:19,3,0	1/1:0,9:9:25.03:117,25,0	./.	1/1:0,8:8:22.13:123,22,0	1/1:0,1:1:2.50:9,2,0	./.	1/1:0,2:2:2.74:12,3,0	./.	1/1:0,2:2:5.52:27,6,0	./.
chr10	66492372	.	TC	T	266.71	PASS	AC=22;AF=0.917;AN=24;BaseQRankSum=1.472;DP=39;FS=11.461;HRun=1;HaplotypeScore=55.4414;InbreedingCoeff=0.3180;MQ=48.70;MQ0=1;MQRankSum=2.275;QD=8.60;ReadPosRankSum=0.758;VQSLOD=-0.2978;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	0/0:4,0:3:6.02:0,6,80	./.	./.	./.	./.	./.	1/1:0,2:2:2.52:13,3,0	1/1:0,3:3:4.68:24,5,0	./.	1/1:0,1:1:2.04:6,2,0	1/1:0,1:1:2.04:6,2,0	./.	./.	1/1:0,1:1:2.50:9,2,0	./.	1/1:0,1:1:2.80:13,3,0	1/1:0,9:9:22.37:139,22,0	./.	1/1:0,8:8:17.29:87,17,0	1/1:0,1:1:1.25:3,1,0	./.	1/1:0,2:2:2.97:20,3,0	./.	1/1:0,2:2:5.65:32,6,0	./.
chr10	66492396	.	C	CT	479.28	PASS	AC=26;AF=0.867;AN=30;BaseQRankSum=-0.580;DP=33;FS=0.000;HRun=1;HaplotypeScore=41.0946;InbreedingCoeff=0.2471;MQ=52.10;MQ0=0;MQRankSum=-0.134;QD=16.53;ReadPosRankSum=1.650;VQSLOD=3.6877;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:1,0:1:1.25:0,1,3	./.	./.	./.	./.	./.	./.	1/1:0,1:1:3.01:45,3,0	1/1:0,3:3:8.90:60,9,0	./.	1/1:1,1:2:3.44:21,3,0	1/1:0,1:1:2.98:21,3,0	1/1:0,1:1:2.97:20,3,0	./.	0/0:1,0:1:2.37:0,2,8	./.	1/1:0,2:1:3.01:45,3,0	1/1:1,6:7:20.77:140,21,0	./.	1/1:1,4:5:14.09:87,14,0	1/1:0,2:2:5.93:40,6,0	1/1:0,1:1:0.47:1,0,0	1/1:0,1:1:2.97:20,3,0	./.	1/1:0,2:2:5.94:41,6,0	1/1:0,1:1:2.98:21,3,0
chr10	66492542	.	TTTG	T	2672.38	PASS	AB=1.000;AC=44;AF=0.786;AN=56;BaseQRankSum=2.954;DP=275;FS=9.947;HRun=0;HaplotypeScore=57.6222;InbreedingCoeff=0.5509;MQ=77.74;MQ0=7;MQRankSum=-4.324;QD=12.97;ReadPosRankSum=-1.839;VQSLOD=1.7489;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,1:7:17.92:160,18,0	1/1:1,0:1:3:25,3,0	0/1:40,0:18:21.82:22,0,113	0/1:41,0:17:10.53:11,0,26	1/1:3,0:3:2.94:18,3,0	1/1:4,4:8:21.01:287,21,0	1/1:7,0:7:14.87:108,15,0	0/0:24,0:23:30.34:0,30,440	1/1:4,0:4:8.99:113,9,0	1/1:6,0:5:11.68:111,12,0	1/1:6,1:7:15.58:148,16,0	1/1:6,0:6:17.96:207,18,0	0/0:12,0:12:32.95:0,33,530	1/1:8,0:8:14.91:139,15,0	1/1:9,3:11:29.92:329,30,0	1/1:4,0:4:3.01:33,3,0	1/1:10,0:9:14.86:126,15,0	1/1:5,0:4:4.84:66,5,0	1/1:7,2:8:15.01:185,15,0	1/1:3,3:6:18.02:227,18,0	1/1:4,0:4:5.95:61,6,0	0/0:7,0:7:1:0,1,266	0/0:12,0:12:34.55:0,35,503	0/0:14,0:14:38.55:0,39,619	1/1:2,1:3:8.98:96,9,0	1/1:1,3:4:12:165,12,0	1/1:3,2:5:14.96:162,15,0	1/1:2,1:3:3.01:48,3,0
chr10	66492543	.	TTG	T	2384.50	PASS	AB=1.000;AC=44;AF=0.786;AN=56;BaseQRankSum=3.740;DP=273;FS=5.686;HRun=0;HaplotypeScore=53.9334;InbreedingCoeff=0.5326;MQ=77.94;MQ0=7;MQRankSum=-4.499;QD=11.69;ReadPosRankSum=-2.671;VQSLOD=1.7776;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,3:7:17.98:202,18,0	1/1:1,0:1:3:25,3,0	0/1:40,0:18:23.08:23,0,83	0/1:41,0:17:18.29:18,0,33	1/1:2,0:2:2.94:18,3,0	1/1:8,0:8:21:210,21,0	1/1:6,1:7:14.66:115,15,0	0/0:24,0:23:8.87:0,9,265	1/1:4,0:4:11.66:94,12,0	1/1:6,0:5:11.04:90,11,0	1/1:7,0:7:17.66:135,18,0	1/1:6,0:6:18.01:201,18,0	0/0:12,0:12:30.84:0,31,400	1/1:8,0:8:14.92:124,15,0	1/1:11,1:11:29.97:318,30,0	1/1:3,0:3:3.01:34,3,0	1/1:10,0:9:14.93:131,15,0	1/1:5,0:4:4.83:50,5,0	1/1:9,0:8:15:147,15,0	1/1:6,0:6:18.01:176,18,0	1/1:3,0:3:5.95:46,6,0	0/0:7,0:7:0.99:0,1,193	0/0:12,0:12:33.41:0,33,394	0/0:14,0:14:31.99:0,32,478	1/1:3,0:3:8.98:80,9,0	1/1:4,0:4:11.99:119,12,0	1/1:5,0:5:15:163,15,0	1/1:3,0:3:3.01:33,3,0
chr10	66492544	.	TG	T	2080.02	PASS	AB=0.941;AC=45;AF=0.804;AN=56;BaseQRankSum=4.081;DP=272;FS=4.260;HRun=1;HaplotypeScore=51.1994;InbreedingCoeff=0.4067;MQ=78.08;MQ0=7;MQRankSum=-4.011;QD=9.16;ReadPosRankSum=-3.195;VQSLOD=-0.0087;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,0:7:17.96:154,18,0	1/1:1,0:1:3:25,3,0	0/1:35,5:18:25.79:26,0,68	0/1:40,3:17:17.64:18,0,47	1/1:1,0:1:2.94:18,3,0	1/1:10,0:9:20.97:190,21,0	1/1:6,0:6:14.28:97,14,0	0/1:24,0:23:38.73:39,0,176	1/1:3,1:4:11.95:99,12,0	1/1:6,0:5:11.75:97,12,0	1/1:6,1:7:17.65:126,18,0	1/1:4,2:6:17.77:141,18,0	0/0:12,0:12:14.80:0,15,284	1/1:5,3:8:14.87:108,15,0	1/1:11,2:12:31.75:266,32,0	1/1:3,0:3:2.99:23,3,0	1/1:7,1:7:14.91:116,15,0	1/1:5,0:4:3.24:45,3,0	1/1:9,0:8:14.97:128,15,0	1/1:6,0:6:17.98:153,18,0	1/1:3,0:3:5.78:31,6,0	0/0:7,0:7:0.35:0,0,117	0/0:12,0:12:19.32:0,19,287	0/0:14,0:14:31.63:0,32,353	1/1:3,0:3:8.97:75,9,0	1/1:4,0:4:11.97:102,12,0	1/1:4,1:5:14.99:131,15,0	1/1:3,0:3:3.01:34,3,0
chr10	66492550	.	T	TG	42.50	PASS	AB=0.900;AC=12;AF=0.214;AN=56;BaseQRankSum=3.522;DP=273;FS=20.531;HRun=0;HaplotypeScore=61.1329;InbreedingCoeff=-0.2602;MQ=73.29;MQ0=7;MQRankSum=-2.113;QD=0.57;ReadPosRankSum=1.874;VQSLOD=-0.3088;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:7:9.54:0,10,96	0/0:1,0:1:3:0,3,25	0/0:41,0:19:17.13:0,17,139	0/0:42,0:16:14.35:0,14,97	0/0:2,0:2:2.97:0,3,20	0/1:10,0:9:9.84:18,0,10	0/0:5,0:5:5.86:0,6,38	0/0:22,0:21:41.95:0,42,289	0/1:3,1:4:14.46:27,0,14	0/1:3,1:3:18.63:19,0,27	0/0:9,1:10:0.16:0,0,53	0/0:5,0:5:5.09:0,5,35	0/0:13,0:13:39:0,39,438	0/0:7,0:7:2.31:0,2,31	0/1:10,0:10:1.10:1,0,74	0/1:4,0:4:7.38:7,0,9	0/1:8,2:9:8.80:9,0,85	0/1:3,1:4:15.34:22,0,15	0/1:8,1:8:21.74:22,0,22	0/1:7,0:7:13.55:14,0,36	0/1:2,1:3:14.33:17,0,14	0/0:8,0:8:23.97:0,24,271	0/0:13,0:13:38.99:0,39,447	0/0:13,0:13:39.08:0,39,503	0/1:3,0:3:3.10:3,0,15	0/1:5,0:5:16.28:16,0,31	0/0:4,0:4:2.86:0,3,41	0/0:4,0:4:2.37:0,2,8
chr10	66492556	.	TTG	T	529.23	PASS	AB=0.986;AC=22;AF=0.407;AN=54;BaseQRankSum=3.279;DP=261;FS=49.764;HRun=0;HaplotypeScore=60.7499;InbreedingCoeff=-0.2476;MQ=71.44;MQ0=7;MQRankSum=-1.352;QD=3.23;ReadPosRankSum=1.050;VQSLOD=0.1792;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:9,0:7:15.54:33,0,16	./.	0/0:40,0:18:13.68:0,14,145	0/1:33,1:14:16.34:49,0,16	0/1:2,0:2:0:0,0,0	0/1:7,0:7:18.86:27,0,19	0/1:4,0:4:8.87:9,0,11	0/1:22,0:21:82.75:83,0,174	1/1:2,1:3:7.87:40,8,0	0/1:4,0:3:1.86:2,0,11	0/1:10,0:10:21.79:22,0,57	1/1:4,1:5:14.87:116,15,0	0/0:12,0:12:35.38:0,35,365	0/1:5,1:6:5.15:32,0,5	0/1:10,1:10:14.31:122,0,14	0/1:5,0:5:18.95:19,0,32	0/1:10,0:9:28.71:29,0,129	0/1:5,0:5:4.77:5,0,32	0/1:9,0:7:20.47:20,0,35	0/0:8,0:8:4.09:0,4,76	0/1:3,0:3:5.90:6,0,12	0/0:9,0:9:8.02:0,8,274	0/0:13,0:13:30.74:0,31,406	0/0:13,0:13:38.58:0,39,466	0/0:2,0:2:5.38:0,5,42	0/1:4,0:4:1.20:1,0,42	0/1:5,0:5:26.74:58,0,27	0/1:4,0:4:8.30:8,0,15
chr10	66492562	.	G	GT	1514.07	PASS	AB=0.732;AC=34;AF=0.654;AN=52;BaseQRankSum=4.485;DP=241;FS=6.085;HRun=9;HaplotypeScore=48.7283;InbreedingCoeff=0.6395;MQ=64.18;MQ0=8;MQRankSum=-4.410;QD=13.05;ReadPosRankSum=-0.090;VQSLOD=2.8047;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,0:7:5.56:30,6,0	./.	0/0:30,0:11:17.96:0,18,147	0/0:24,0:10:5.50:0,6,33	./.	1/1:4,4:7:12.03:132,12,0	1/1:3,1:3:3.01:33,3,0	0/0:20,0:19:37.15:0,37,300	1/1:2,1:3:2.98:23,3,0	1/1:3,3:4:6.49:67,6,0	1/1:3,6:9:17.84:199,18,0	0/1:4,2:5:0:0,0,0	0/0:12,0:12:17.95:0,18,156	1/1:3,2:5:6.02:65,6,0	1/1:5,6:10:23.04:216,23,0	1/1:2,3:5:8.89:81,9,0	1/1:5,5:9:14.76:165,15,0	0/1:3,2:5:20.03:27,0,20	1/1:4,6:8:18.05:198,18,0	1/1:2,6:8:21.05:227,21,0	1/1:3,2:5:3.01:33,3,0	0/0:9,0:9:23.84:0,24,197	0/0:10,0:10:23.98:0,24,208	0/0:15,0:14:17.92:0,18,149	1/1:1,1:2:3.01:33,3,0	1/1:2,2:4:6.02:66,6,0	1/1:1,4:5:9.02:97,9,0	0/0:3,1:4:3:0,3,26
chr10	66492848	.	GGAA	G	1837.35	PASS	AB=0.953;AC=33;AF=0.589;AN=56;BaseQRankSum=3.288;DP=354;FS=59.468;HRun=0;HaplotypeScore=84.9634;InbreedingCoeff=0.3650;MQ=38.64;MQ0=49;MQRankSum=-4.305;QD=8.20;ReadPosRankSum=-1.286;VQSLOD=0.2966;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:21,1:20:37.52:275,38,0	0/0:4,0:3:0:0,0,0	0/0:32,0:5:11.73:0,12,77	0/0:33,0:10:21.91:0,22,233	1/1:3,7:10:9.02:118,9,0	0/0:5,0:2:0.94:0,1,3	0/1:12,0:4:6.25:54,0,6	0/1:33,0:29:99:125,0,221	0/1:5,0:5:7.84:63,0,8	1/1:2,0:2:3.48:30,3,0	0/1:10,0:9:6.63:23,0,7	0/1:6,1:6:25.14:83,0,25	0/0:16,0:14:39.09:0,39,667	1/1:8,1:9:13.97:113,14,0	1/1:11,1:8:9.69:90,10,0	1/1:4,0:3:5.30:30,5,0	1/1:11,0:10:18.37:143,18,0	1/1:9,0:9:12.29:96,12,0	0/1:17,1:12:23.44:178,0,23	1/1:9,3:10:7.37:110,7,0	1/1:12,0:9:9.85:74,10,0	0/0:10,0:10:27.05:0,27,398	0/0:14,0:12:36.10:0,36,707	0/0:16,0:12:27:0,27,453	1/1:7,1:6:10.24:97,10,0	0/1:9,2:8:10.38:89,0,10	1/1:8,1:8:17.89:133,18,0	1/1:6,2:7:9.19:98,9,0
chr10	66492860	.	GGAGGAA	G	2743.09	PASS	AB=1.000;AC=42;AF=0.750;AN=56;BaseQRankSum=5.060;DP=371;FS=28.238;HRun=0;HaplotypeScore=104.9732;InbreedingCoeff=0.6920;MQ=51.90;MQ0=34;MQRankSum=-4.798;QD=10.97;ReadPosRankSum=-1.899;VQSLOD=0.7751;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:21,1:21:29.92:307,30,0	1/1:4,0:4:2.94:25,3,0	0/0:27,0:7:14.17:0,14,175	0/0:36,0:15:12.41:0,12,348	1/1:10,0:10:9.84:58,10,0	1/1:7,0:5:5.71:31,6,0	1/1:13,0:7:11.58:109,12,0	0/1:30,0:27:58.51:144,0,59	1/1:8,0:8:16.37:170,16,0	1/1:4,0:4:8.09:78,8,0	1/1:9,0:8:11.38:74,11,0	1/1:6,1:7:14.44:145,14,0	0/0:15,0:13:33.10:0,33,1014	1/1:6,1:7:15.08:140,15,0	1/1:11,0:10:19.02:158,19,0	1/1:5,0:4:7.72:49,8,0	1/1:11,0:10:6.08:141,6,0	1/1:10,0:10:15.96:95,16,0	1/1:17,1:12:19.97:220,20,0	1/1:18,0:16:16.29:211,16,0	0/1:14,0:12:4.74:57,0,5	0/0:11,0:11:30.08:0,30,830	0/0:12,0:11:33.11:0,33,1013	0/0:20,0:16:36.08:0,36,976	1/1:8,0:7:14.64:146,15,0	1/1:14,0:11:12.73:175,13,0	1/1:10,1:11:11.34:194,11,0	1/1:7,2:9:19.29:205,19,0
chr10	66492863	.	GGAA	G	3208.07	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=2.908;DP=393;FS=9.761;HRun=0;HaplotypeScore=95.2832;InbreedingCoeff=0.8522;MQ=54.75;MQ0=25;MQRankSum=-4.065;QD=11.93;ReadPosRankSum=-3.527;VQSLOD=1.8356;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:22:39.72:310,40,0	1/1:4,0:4:3.97:42,4,0	0/0:28,0:11:25.95:0,26,266	0/0:35,0:18:1.38:0,1,296	1/1:12,0:12:12.01:143,12,0	1/1:8,0:8:10.81:104,11,0	1/1:13,0:7:17.25:145,17,0	1/1:33,0:31:48.76:361,49,0	1/1:8,0:8:17.14:150,17,0	1/1:4,0:4:9.48:82,9,0	1/1:12,0:11:10.60:103,11,0	1/1:9,0:9:19.43:166,19,0	0/0:15,0:13:33.10:0,33,712	1/1:9,0:9:22.83:179,23,0	1/1:10,1:10:17.89:138,18,0	1/1:5,0:4:8.30:57,8,0	1/1:12,0:11:22.04:170,22,0	1/1:10,0:10:14.46:99,14,0	1/1:17,0:13:30.28:245,30,0	1/1:4,14:16:13.27:147,13,0	1/1:16,0:14:12.28:84,12,0	0/0:12,0:12:33.08:0,33,652	0/0:13,0:12:36.08:0,36,694	0/0:19,0:16:36.04:0,36,679	1/1:8,1:9:13.20:116,13,0	1/1:13,2:12:18.86:171,19,0	1/1:11,0:11:21.76:188,22,0	1/1:10,0:10:21.11:190,21,0
chr10	66493066	.	AATCTATCTATCTATCTATCT	A	9523.57	PASS	AB=0.711;AC=33;AF=0.589;AN=56;BaseQRankSum=8.438;DP=506;FS=6.561;HRun=0;HaplotypeScore=229.1840;InbreedingCoeff=0.7093;MQ=65.28;MQ0=3;MQRankSum=-4.557;QD=29.12;ReadPosRankSum=-1.148;VQSLOD=2.9790;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:29.87:0,30,1348	0/0:1,0:2:3.01:0,3,101	0/0:18,0:16:1.25:0,1,3	0/0:15,0:11:3.01:0,3,42	0/0:20,0:20:24.08:0,24,1500	1/1:8,12:20:27.08:1223,27,0	0/0:12,0:12:5.05:0,5,48	0/0:24,0:23:18.53:0,19,427	1/1:7,9:16:6.02:318,6,0	1/1:5,9:13:21.02:660,21,0	1/1:5,8:13:3.01:159,3,0	1/1:7,12:19:9.03:477,9,0	0/0:16,0:21:18.06:0,18,768	1/1:5,11:16:15.05:718,15,0	1/1:10,25:35:33.11:1625,33,0	1/1:7,11:18:12.04:636,12,0	0/1:16,11:27:54:153,0,54	1/1:3,2:5:3.01:159,3,0	1/1:15,7:21:23.95:548,24,0	1/1:6,13:19:18.06:768,18,0	1/1:32,0:32:24.06:428,24,0	0/0:8,0:15:23.74:0,24,1068	0/0:12,0:19:27.09:0,27,1176	0/0:7,0:9:9.03:0,9,458	1/1:13,0:13:9.02:144,9,0	1/1:7,14:20:33:713,33,0	1/1:6,13:19:8.68:477,9,0	1/1:8,10:18:6.02:318,6,0
chr10	66493102	.	T	TC	768.24	PASS	AB=0.919;AC=9;AF=0.161;AN=56;BaseQRankSum=2.970;DP=472;FS=7.988;HRun=1;HaplotypeScore=115.1582;InbreedingCoeff=-0.2059;MQ=53.26;MQ0=17;MQRankSum=-0.148;QD=5.23;ReadPosRankSum=0.884;VQSLOD=0.1466;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:57.16:0,57,747	0/0:3,0:3:5.82:0,6,36	0/0:29,0:16:39.09:0,39,481	0/0:25,0:12:33.98:0,34,432	0/0:21,0:21:42.14:0,42,587	0/1:21,1:22:10.40:10,0,207	0/0:9,0:9:24.04:0,24,298	0/0:34,0:28:84.28:0,84,1172	0/0:10,0:10:7.75:0,8,58	0/1:12,0:12:63.18:63,0,209	0/0:10,0:10:14.41:0,14,175	0/0:14,0:14:13.13:0,13,108	0/0:11,0:11:20.90:0,21,244	0/1:12,0:12:32.28:32,0,59	0/0:30,0:30:31.46:0,31,241	0/0:20,0:20:36.58:0,37,409	0/1:16,0:16:27.42:27,0,80	0/0:6,0:6:14.41:0,14,176	0/1:12,0:11:87.64:88,0,244	0/1:16,0:16:65.05:65,0,195	0/1:17,10:27:99:283,0,480	0/0:16,0:16:35.76:0,36,387	0/0:20,0:20:44.83:0,45,555	0/0:10,0:10:26.94:0,27,312	0/1:3,7:10:67.65:128,0,68	0/1:20,0:20:99:211,0,415	0/0:19,0:19:16.14:0,16,150	0/0:13,0:13:7.75:0,8,58
chr10	66493336	.	C	CGTGTGTGTGT	9993.43	PASS	AC=40;AF=0.741;AN=54;BaseQRankSum=1.297;DP=546;FS=0.707;HRun=0;HaplotypeScore=213.6555;InbreedingCoeff=0.7278;MQ=53.03;MQ0=6;MQRankSum=-6.955;QD=24.37;ReadPosRankSum=-2.129;VQSLOD=3.8696;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:28:9.03:219,9,0	0/0:7,0:7:0.47:0,0,1	./.	0/0:31,0:19:9.03:0,9,207	1/1:21,0:24:4.96:256,5,0	1/1:14,0:14:3.01:90,3,0	1/1:20,0:20:6:173,6,0	1/1:29,0:29:57.07:1377,57,0	1/1:13,1:19:8.99:219,9,0	1/1:17,3:21:26.92:967,27,0	0/0:14,0:14:1.36:0,1,3	1/1:12,0:15:9.03:151,9,0	0/0:16,0:17:18.06:0,18,517	1/1:15,0:15:6.02:239,6,0	1/1:22,3:27:14.78:685,15,0	1/1:18,1:23:11.66:418,12,0	1/1:17,4:24:22.32:881,22,0	1/1:12,0:14:12.04:423,12,0	1/1:22,0:21:12.14:302,12,0	1/1:23,2:27:8.34:445,8,0	1/1:20,0:18:5.96:193,6,0	0/0:11,0:11:24.08:0,24,693	0/0:19,0:20:36.04:0,36,898	0/0:20,0:21:25.72:0,26,732	1/1:14,0:15:9.03:388,9,0	1/1:21,2:24:35.43:1249,35,0	1/1:16,0:17:10.44:325,10,0	1/1:4,3:10:24.08:994,24,0
chr10	66494170	.	G	GC	619.38	PASS	AB=1.000;AC=52;AF=0.963;AN=54;BaseQRankSum=0.472;DP=139;FS=8.587;HRun=1;HaplotypeScore=153.1937;InbreedingCoeff=0.2289;MQ=61.84;MQ0=0;MQRankSum=-1.732;QD=4.46;ReadPosRankSum=1.260;VQSLOD=-0.0340;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:4:2.50:9,2,0	1/1:1,0:1:2.92:17,3,0	0/1:2,0:2:0:0,0,0	0/1:5,0:4:0.95:1,0,28	1/1:4,1:5:2.96:19,3,0	1/1:2,0:2:2.50:9,2,0	1/1:7,1:8:12.37:50,12,0	1/1:2,0:2:2.37:8,2,0	1/1:8,0:8:7.86:42,8,0	1/1:11,1:12:14.78:46,15,0	1/1:1,0:1:0.47:1,0,0	1/1:7,0:7:5.93:40,6,0	1/1:1,1:2:5.34:28,5,0	./.	1/1:1,0:1:2.37:8,2,0	1/1:3,0:3:4.74:16,5,0	1/1:5,1:6:7.36:25,7,0	1/1:8,1:9:15.85:67,16,0	1/1:4,0:4:2.80:13,3,0	1/1:6,0:6:6.81:22,7,0	1/1:12,1:13:7.70:35,8,0	1/1:10,0:10:10.08:36,10,0	1/1:3,0:3:0.47:1,0,0	1/1:5,1:6:10.45:46,10,0	1/1:4,1:5:5.46:29,5,0	1/1:6,0:6:6.29:19,6,0	1/1:6,0:6:13.72:77,14,0	1/1:1,1:2:5.95:43,6,0
chr10	66495680	.	ACCCCC	A	11133.20	PASS	AB=0.556;AC=39;AF=0.722;AN=54;BaseQRankSum=-0.365;DP=410;FS=2.862;HRun=13;HaplotypeScore=92.3437;InbreedingCoeff=0.7894;MQ=67.03;MQ0=0;MQRankSum=0.094;QD=31.63;ReadPosRankSum=6.483;VQSLOD=3.7284;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,0:27:35.76:132,36,0	0/1:2,0:10:12.34:24,0,12	0/0:10,0:8:12.03:0,12,198	0/0:8,0:6:3.01:0,3,34	0/0:5,0:5:6.01:0,6,72	1/1:3,11:14:21.06:360,21,0	1/1:0,22:22:42.12:717,42,0	0/0:10,0:16:14.71:0,15,174	1/1:2,21:23:45.12:769,45,0	1/1:1,12:13:36.08:547,36,0	1/1:1,10:12:21.49:319,21,0	1/1:4,12:16:30.09:498,30,0	0/0:7,0:8:11.99:0,12,207	1/1:3,22:25:63.21:1073,63,0	1/1:4,20:24:57.18:969,57,0	1/1:1,21:23:58.27:936,58,0	1/1:0,24:24:51.14:873,51,0	1/1:0,8:8:21.07:360,21,0	1/1:4,15:19:29.55:687,30,0	1/1:1,8:10:23.99:340,24,0	1/1:4,22:26:47.99:785,48,0	0/0:2,0:3:6.02:0,6,109	0/0:7,0:7:9.82:0,10,68	./.	1/1:2,8:10:24.08:407,24,0	1/1:4,23:27:63.09:1031,63,0	1/1:1,9:10:12.38:206,12,0	1/1:2,7:9:5.98:101,6,0
chr10	66495957	.	G	GTC	15825.71	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=-12.837;DP=561;FS=6.252;HRun=0;HaplotypeScore=62.1593;InbreedingCoeff=0.9828;MQ=84.69;MQ0=1;MQRankSum=-4.466;QD=35.89;ReadPosRankSum=2.881;VQSLOD=7.1124;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,23:26:57.19:941,57,0	1/1:1,10:12:30.10:478,30,0	0/0:22,0:21:13.21:0,13,338	0/0:37,1:36:32.05:0,32,763	0/0:13,0:13:39.08:0,39,470	1/1:1,28:29:78.27:1288,78,0	1/1:6,14:20:36.12:594,36,0	1/1:10,21:31:63.22:1032,63,0	1/1:1,20:21:51.17:842,51,0	1/1:1,18:19:54.16:859,54,0	1/1:2,11:13:33.11:540,33,0	1/1:3,14:17:36.12:594,36,0	0/0:17,0:17:45.14:0,45,563	1/1:2,8:10:24.08:396,24,0	1/1:5,22:29:54.18:892,54,0	1/1:2,17:19:39.13:644,39,0	1/1:3,23:25:60.21:990,60,0	1/1:2,15:17:39.13:633,39,0	1/1:5,8:13:24.08:388,24,0	1/1:3,20:23:57.19:941,57,0	1/1:7,20:27:51.17:842,51,0	0/0:3,0:3:9.03:0,9,112	0/0:11,0:11:33.09:0,33,400	0/0:16,0:16:42.11:0,42,510	1/1:0,21:21:57.19:941,57,0	1/1:8,18:26:19.66:802,20,0	1/1:3,17:21:39.60:644,40,0	1/1:1,20:21:33.11:545,33,0
chr10	66496405	.	AAC	A	777.67	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.894;DP=480;FS=1.986;HRun=0;HaplotypeScore=55.0928;InbreedingCoeff=0.9658;MQ=74.13;MQ0=0;MQRankSum=-0.225;QD=37.03;ReadPosRankSum=0.511;VQSLOD=5.5069;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:48.16:0,48,927	0/0:5,0:5:15.05:0,15,290	0/0:6,0:6:15.04:0,15,272	0/0:10,0:10:29.46:0,29,452	1/1:1,20:21:57.19:873,57,0	0/0:13,0:13:39.13:0,39,753	0/0:14,0:14:42.14:0,42,811	0/0:36,0:36:99:0,108,2076	0/0:15,0:15:42.14:0,42,810	0/0:27,0:27:75.26:0,75,1442	0/0:18,0:18:54.19:0,54,1042	0/0:15,0:15:36.12:0,36,695	0/0:18,0:18:54.19:0,54,1043	0/0:19,0:19:45.15:0,45,869	0/0:21,0:21:51.17:0,51,985	0/0:12,0:12:32.99:0,33,635	0/0:10,0:10:30.09:0,30,548	0/0:15,0:15:39.13:0,39,750	0/0:16,0:16:45.15:0,45,868	0/0:21,0:21:63.22:0,63,1191	0/0:15,0:15:45.15:0,45,842	0/0:13,0:13:39.13:0,39,741	0/0:19,0:19:54.19:0,54,1030	0/0:14,0:14:42.14:0,42,796	0/0:10,0:10:24.06:0,24,427	0/0:19,0:19:54.19:0,54,1043	0/0:34,0:34:93.32:0,93,1788	0/0:26,0:26:72.25:0,72,1375
chr10	66496481	.	G	GTTT	8588.16	PASS	AB=1.000;AC=43;AF=0.768;AN=56;BaseQRankSum=1.058;DP=450;FS=3.280;HRun=12;HaplotypeScore=79.1879;InbreedingCoeff=0.8454;MQ=70.61;MQ0=0;MQRankSum=-2.946;QD=23.86;ReadPosRankSum=1.157;VQSLOD=4.0067;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:19:17.93:54,18,0	1/1:1,0:2:1.25:3,1,0	0/0:15,0:12:19.05:0,19,149	0/1:18,0:14:1.08:1,0,145	1/1:13,1:26:43.04:311,43,0	1/1:1,14:17:37.35:631,37,0	1/1:5,7:15:18.04:284,18,0	0/0:24,0:28:55.35:0,55,586	1/1:4,9:13:24.04:390,24,0	1/1:5,18:24:49.86:756,50,0	1/1:3,12:16:42.02:601,42,0	1/1:3,10:13:24.08:420,24,0	0/0:12,0:12:17.92:0,18,202	1/1:4,5:14:18.04:263,18,0	1/1:5,19:24:36.12:656,36,0	1/1:4,5:9:5.86:110,6,0	1/1:3,2:5:6.02:110,6,0	1/1:3,9:13:12.04:220,12,0	1/1:6,9:15:33.08:507,33,0	1/1:5,18:25:50.99:655,51,0	1/1:3,0:3:6.02:89,6,0	0/0:15,0:15:39.08:0,39,425	0/0:12,0:13:24.03:0,24,222	0/0:7,0:7:14.96:0,15,168	1/1:3,15:20:51.17:802,51,0	1/1:7,14:23:48.07:682,48,0	1/1:7,20:29:43.53:712,44,0	1/1:2,12:16:18.06:330,18,0
chr10	66497308	.	CTCTCTCTCTCTCTCTCTCTT	C	1127.03	PASS	AB=1.000;AC=6;AF=0.107;AN=56;BaseQRankSum=1.449;DP=569;FS=14.842;HRun=0;HaplotypeScore=276.1590;InbreedingCoeff=0.4924;MQ=56.07;MQ0=5;MQRankSum=-3.109;QD=14.09;ReadPosRankSum=-0.033;VQSLOD=1.0374;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:6,29:35:1.21:350,1,0	1/1:0,9:9:24.03:858,24,0	0/0:15,0:11:12.01:0,12,154	0/0:14,0:7:9.50:0,9,134	0/0:23,0:23:48.47:0,48,888	0/0:22,0:21:34.88:0,35,1121	0/0:18,0:18:29.85:0,30,1130	0/1:23,0:15:29.13:29,0,114	0/0:11,0:11:21.07:0,21,1125	0/0:19,0:19:45.14:0,45,2270	0/0:18,0:18:29.74:0,30,1186	0/0:18,0:17:36.09:0,36,1451	0/0:8,0:8:18.06:0,18,972	0/0:13,0:13:27.04:0,27,657	0/0:18,0:17:23.93:0,24,798	0/0:19,0:19:49.82:0,50,1871	0/0:30,0:29:72.11:0,72,1782	0/1:13,0:13:13.29:13,0,1264	0/0:24,0:24:57.15:0,57,1939	0/0:34,0:34:78.48:0,78,2560	0/0:10,0:8:15.04:0,15,772	0/0:26,0:25:62.73:0,63,3620	0/0:28,0:28:73.18:0,73,3456	0/0:24,0:24:54.67:0,55,3055	0/0:19,0:19:41.81:0,42,1489	0/0:33,0:33:96.32:0,96,5376	0/0:24,0:23:20.95:0,21,581	0/0:21,0:20:55.32:0,55,2544
chr10	66499239	.	T	TAAG	473.26	PASS	AB=1.000;AC=24;AF=0.632;AN=38;BaseQRankSum=-3.232;DP=147;FS=13.808;HRun=0;HaplotypeScore=18.0848;InbreedingCoeff=0.3489;MQ=61.10;MQ0=50;MQRankSum=0.412;QD=5.09;ReadPosRankSum=-1.616;VQSLOD=-0.6287;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/1:26,0:5:4.54:5,0,138	0/1:19,0:10:0.47:0,0,135	1/1:2,0:4:5.95:42,6,0	./.	1/1:4,0:2:3.01:49,3,0	1/1:4,0:2:3.01:54,3,0	./.	1/1:3,0:3:2.99:40,3,0	1/1:3,2:3:2.97:20,3,0	./.	0/0:6,0:4:1.77:0,2,4	1/1:3,0:2:6.02:77,6,0	1/1:3,0:2:6.01:76,6,0	0/0:1,0:1:0:0,0,0	0/1:3,0:2:0:0,0,0	./.	0/0:19,0:1:0:0,0,0	1/1:2,0:2:6.02:103,6,0	1/1:4,0:2:3.01:51,3,0	0/0:3,0:3:6.02:0,6,104	0/0:8,0:8:15.51:0,16,225	0/1:5,0:2:0:0,0,0	./.	1/1:6,0:3:6.01:65,6,0	./.	./.
chr10	66500348	.	TCTGC	T	1837.66	PASS	AC=40;AF=1.000;AN=40;DP=78;FS=0.000;HRun=0;HaplotypeScore=90.1220;InbreedingCoeff=-0.0655;MQ=39.94;MQ0=0;QD=24.18;VQSLOD=3.1444;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,2:2:4.25:31,4,0	1/1:0,2:2:6.01:58,6,0	./.	./.	1/1:0,7:5:14.50:114,14,0	1/1:0,8:7:18.03:175,18,0	./.	./.	1/1:0,5:5:12.02:114,12,0	1/1:0,1:1:3.01:33,3,0	1/1:0,2:2:6.01:56,6,0	1/1:0,4:4:12.02:116,12,0	1/1:0,1:1:3:28,3,0	1/1:0,3:3:9.01:86,9,0	1/1:0,5:5:15.02:144,15,0	1/1:0,4:3:9.02:92,9,0	1/1:0,6:6:16.63:127,17,0	./.	./.	1/1:0,5:5:14.98:133,15,0	./.	1/1:0,4:5:15:133,15,0	1/1:0,3:3:9:81,9,0	./.	1/1:0,4:4:12.02:116,12,0	1/1:0,3:3:9.03:106,9,0	1/1:0,5:4:12.03:138,12,0	1/1:0,1:1:3.01:35,3,0
chr10	66500358	.	C	CATCT	2711.97	PASS	AC=40;AF=1.000;AN=40;DP=78;FS=0.000;HRun=0;HaplotypeScore=86.1478;InbreedingCoeff=-0.0648;MQ=39.94;MQ0=0;QD=35.68;VQSLOD=3.6804;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,2:2:5.91:55,6,0	1/1:0,2:2:6.02:84,6,0	./.	./.	1/1:0,7:5:15.01:176,15,0	1/1:0,8:7:18.06:252,18,0	./.	./.	1/1:0,5:5:12.04:166,12,0	1/1:0,1:1:3.01:48,3,0	1/1:0,2:2:6.02:83,6,0	1/1:0,4:4:12.04:164,12,0	1/1:0,1:1:3.01:40,3,0	1/1:0,3:3:9.03:121,9,0	1/1:0,5:5:15.05:206,15,0	1/1:0,4:3:9.03:134,9,0	1/1:0,6:6:17.97:204,18,0	./.	./.	1/1:0,5:5:15.05:201,15,0	./.	1/1:0,4:5:15.05:195,15,0	1/1:0,2:3:9:107,9,0	./.	1/1:0,4:4:12.04:168,12,0	1/1:0,3:3:9.03:146,9,0	1/1:0,5:4:12.04:190,12,0	1/1:0,1:1:3.01:48,3,0
chr10	66501905	.	TA	T	508.59	PASS	AB=0.897;AC=8;AF=0.143;AN=56;BaseQRankSum=3.415;DP=465;FS=0.000;HRun=11;HaplotypeScore=57.8256;InbreedingCoeff=0.4119;MQ=70.84;MQ0=1;MQRankSum=1.619;QD=5.78;ReadPosRankSum=0.797;VQSLOD=1.1173;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,24:24:62.93:517,63,0	1/1:1,3:4:8.99:74,9,0	0/0:12,0:9:8.92:0,9,65	0/1:10,1:11:34.91:35,0,87	0/0:31,0:31:62.83:0,63,709	0/0:28,0:28:71.92:0,72,711	0/0:12,0:12:33.06:0,33,343	0/0:23,1:25:19.31:0,19,391	0/1:15,3:18:4.21:4,0,357	0/0:17,0:17:48.08:0,48,495	0/1:11,2:13:4.02:4,0,284	0/0:14,0:14:39.10:0,39,413	0/0:8,0:8:18.05:0,18,192	0/0:12,2:14:8.45:0,8,295	0/0:15,2:17:11.21:0,11,270	0/1:17,1:18:6.09:6,0,311	0/0:15,0:15:8.48:0,8,273	0/0:12,0:13:32.90:0,33,325	0/0:27,0:27:43.22:0,43,610	0/0:22,1:23:35.47:0,35,566	0/0:10,0:10:30.08:0,30,320	0/0:13,0:13:20.07:0,20,250	0/0:18,1:19:32.46:0,32,539	0/0:5,0:5:12.01:0,12,119	0/0:18,0:18:54.12:0,54,568	0/0:23,0:23:54.14:0,54,576	0/0:23,1:24:44.52:0,45,673	0/0:9,0:9:24.06:0,24,256
chr10	66502098	.	C	CTTTTTT	8736.03	PASS	AB=1.000;AC=45;AF=0.804;AN=56;BaseQRankSum=0.747;DP=470;FS=24.144;HRun=16;HaplotypeScore=135.6007;InbreedingCoeff=0.7641;MQ=63.42;MQ0=5;MQRankSum=-6.351;QD=23.93;ReadPosRankSum=-4.197;VQSLOD=-0.4207;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:20,1:21:44.54:482,45,0	1/1:5,0:5:11.98:195,12,0	0/0:39,0:19:5.56:0,6,121	0/0:24,0:12:13.09:0,13,103	1/1:20,0:20:30.03:506,30,0	1/1:25,0:25:54.41:806,54,0	1/1:7,0:7:14.96:190,15,0	1/1:30,0:32:54.45:759,54,0	1/1:13,0:12:24.72:213,25,0	1/1:5,9:16:29.60:387,30,0	1/1:8,3:15:12.04:200,12,0	1/1:7,0:8:15.02:270,15,0	0/0:13,0:13:8.56:0,9,284	1/1:8,0:8:18.06:326,18,0	1/1:17,0:17:41.77:710,42,0	1/1:15,0:14:30.06:496,30,0	1/1:19,0:20:40.50:477,40,0	1/1:9,0:10:12:113,12,0	1/1:26,0:25:56.84:688,57,0	1/1:19,0:18:32.09:572,32,0	1/1:6,0:5:7.84:127,8,0	0/1:8,0:8:20.46:20,0,131	0/0:17,0:16:11.16:0,11,184	0/0:10,0:10:23.83:0,24,300	1/1:14,0:14:34.71:443,35,0	1/1:16,0:16:29.24:400,29,0	1/1:9,0:26:12.18:243,12,0	1/1:8,0:7:6.02:112,6,0
chr10	66502400	.	TTTTTTTTTTTTA	T	3743.69	PASS	AB=0.979;AC=17;AF=0.304;AN=56;BaseQRankSum=8.164;DP=411;FS=1.957;HRun=0;HaplotypeScore=102.4529;InbreedingCoeff=-0.2641;MQ=45.43;MQ0=39;MQRankSum=-5.406;QD=17.58;ReadPosRankSum=9.698;VQSLOD=0.5723;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:16:27.09:0,27,680	0/0:1,0:1:3.01:0,3,47	0/0:48,0:5:12.37:0,12,102	0/0:32,0:7:0.54:0,1,107	0/0:16,0:13:27.09:0,27,450	1/1:16,0:15:1.07:656,1,0	0/1:8,0:8:93.24:174,0,93	0/0:36,0:31:83.93:0,84,2152	0/1:10,0:9:72.13:137,0,72	0/1:14,0:8:64.07:65,0,64	0/1:12,0:9:44.70:109,0,45	0/1:5,4:9:52.23:165,0,52	0/0:10,0:8:21.07:0,21,566	0/1:13,0:12:6.49:110,0,6	0/1:20,0:18:0.95:480,0,1	0/1:13,0:12:30.77:339,0,31	0/1:13,0:12:31.83:71,0,32	0/1:13,0:11:99:133,0,158	0/1:17,0:14:55.50:293,0,55	0/1:20,0:17:72.26:239,0,72	0/0:5,0:5:1.72:0,2,5	0/0:2,0:1:3.01:0,3,114	0/0:5,0:3:6.02:0,6,252	0/0:10,0:10:12.72:0,13,273	0/1:9,0:6:19.83:131,0,20	0/1:15,0:13:77.37:357,0,77	0/1:11,0:8:1.26:284,0,1	0/0:13,0:11:22.70:0,23,287
chr10	66502546	.	CG	C	704.53	PASS	AB=0.952;AC=5;AF=0.089;AN=56;BaseQRankSum=5.374;DP=487;FS=0.807;HRun=3;HaplotypeScore=69.3497;InbreedingCoeff=0.7437;MQ=43.35;MQ0=45;MQRankSum=0.400;QD=14.38;ReadPosRankSum=0.431;VQSLOD=2.7035;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,22:22:57.18:706,57,0	1/1:0,3:3:9.03:112,9,0	0/0:5,0:4:9.03:0,9,120	0/0:3,0:2:6.02:0,6,82	0/0:24,0:24:54.15:0,54,739	0/0:19,0:18:54.09:0,54,718	0/0:22,0:18:45.11:0,45,623	0/0:28,0:16:42.10:0,42,576	0/0:17,0:14:36.11:0,36,499	0/0:21,0:20:54.18:0,54,775	0/0:17,0:16:45.14:0,45,629	0/0:17,0:17:48.12:0,48,665	0/0:13,0:13:36.12:0,36,512	0/0:14,0:13:36.12:0,36,517	0/0:27,0:27:72.16:0,72,986	0/0:20,0:20:50.90:0,51,686	0/0:34,0:26:66.22:0,66,947	0/1:19,1:14:4.03:4,0,398	0/0:25,0:18:48.14:0,48,667	0/0:16,0:15:39.13:0,39,559	0/0:13,0:9:27.09:0,27,387	0/0:9,0:9:27.09:0,27,386	0/0:9,0:9:24.08:0,24,344	0/0:21,0:20:48.12:0,48,666	0/0:17,0:17:45.15:0,45,647	0/0:26,0:23:66.22:0,66,948	0/0:12,0:10:33.11:0,33,469	0/0:9,0:9:24.08:0,24,345
chr10	66503801	.	TA	T	178.43	PASS	AB=0.750;AC=1;AF=0.018;AN=56;BaseQRankSum=2.265;DP=475;FS=19.777;HRun=1;HaplotypeScore=57.5663;InbreedingCoeff=-0.0231;MQ=85.04;MQ0=1;MQRankSum=-3.096;QD=9.91;ReadPosRankSum=-2.097;VQSLOD=-0.4226;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:54.12:0,54,784	0/0:2,0:2:6.02:0,6,96	0/0:17,0:16:48.14:0,48,722	0/0:13,0:14:38.46:0,38,539	0/0:26,0:26:78.22:0,78,1175	0/0:20,0:20:54.18:0,54,863	0/0:13,0:13:36.11:0,36,552	0/1:12,6:18:99:253,0,379	0/0:19,0:19:57.19:0,57,908	0/0:21,0:21:63.17:0,63,959	0/0:22,0:22:63.20:0,63,980	0/0:13,0:13:36.12:0,36,572	0/0:8,0:8:24.08:0,24,383	0/0:17,0:17:45.14:0,45,696	0/0:15,0:15:45.15:0,45,719	0/0:15,0:15:42.14:0,42,671	0/0:26,0:26:66.19:0,66,1023	0/0:16,0:16:48.14:0,48,740	0/0:18,0:18:54.14:0,54,791	0/0:31,0:31:93.32:0,93,1473	0/0:14,0:14:39.13:0,39,623	0/0:13,0:13:39.13:0,39,623	0/0:9,0:9:27.09:0,27,431	0/0:13,0:13:39.12:0,39,596	0/0:16,0:16:48.16:0,48,762	0/0:30,0:30:90.30:0,90,1418	0/0:26,0:26:75.06:0,75,1165	0/0:4,0:4:12.04:0,12,191
chr10	66503846	.	GT	G	7083.54	PASS	AB=0.744;AC=44;AF=0.786;AN=56;BaseQRankSum=1.294;DP=467;FS=1.868;HRun=12;HaplotypeScore=51.4664;InbreedingCoeff=0.7973;MQ=73.34;MQ0=1;MQRankSum=-2.294;QD=17.32;ReadPosRankSum=2.051;VQSLOD=6.0373;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,18:21:47.79:371,48,0	1/1:1,3:5:11:75,11,0	0/1:13,1:10:11.22:11,0,72	0/0:12,0:11:15.32:0,15,116	1/1:4,20:25:25.29:366,25,0	1/1:4,12:16:29.87:232,30,0	1/1:2,17:19:41.83:325,42,0	1/1:3,9:13:25.93:192,26,0	1/1:3,10:13:26.89:209,27,0	1/1:3,17:20:50.79:395,51,0	1/1:1,23:26:69.65:508,70,0	1/1:4,16:20:47.79:371,48,0	0/0:13,1:14:18.85:0,19,366	1/1:2,15:17:41.83:325,42,0	1/1:0,14:14:41.84:325,42,0	1/1:2,13:15:14.97:255,15,0	1/1:2,16:18:44.83:348,45,0	1/1:3,11:14:29.88:232,30,0	1/1:2,15:17:44.82:348,45,0	1/1:5,23:30:46.15:518,46,0	1/1:2,9:11:23.90:186,24,0	0/0:8,0:10:17.71:0,18,150	0/0:13,0:14:38.91:0,39,380	0/0:8,0:8:21.03:0,21,207	1/1:2,17:19:50.80:395,51,0	1/1:6,23:29:65.70:509,66,0	1/1:3,24:28:43.32:509,43,0	0/1:1,4:5:5.65:78,0,6
chr10	66504678	.	G	GA	1600.95	PASS	AB=0.829;AC=10;AF=0.179;AN=56;BaseQRankSum=-6.633;DP=513;FS=2.458;HRun=10;HaplotypeScore=59.7058;InbreedingCoeff=0.5379;MQ=67.43;MQ0=14;MQRankSum=0.126;QD=13.68;ReadPosRankSum=-1.049;VQSLOD=3.4511;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,30:34:69.17:734,69,0	0/1:3,4:6:12.63:84,0,13	0/0:27,0:15:9.69:0,10,85	0/0:22,0:14:12.28:0,12,145	1/1:5,15:20:20.42:402,20,0	0/0:13,1:14:10.07:0,10,288	0/0:16,0:16:20.95:0,21,172	1/1:5,18:22:48.09:494,48,0	0/0:12,0:12:32.55:0,33,255	0/0:22,1:23:18.97:0,19,362	0/0:12,0:12:26.96:0,27,222	0/0:14,0:14:32.95:0,33,271	0/0:15,0:16:43.85:0,44,350	0/0:14,0:15:33.81:0,34,257	0/0:15,0:16:21.27:0,21,282	0/0:11,0:11:23.77:0,24,197	0/0:38,0:39:91.60:0,92,736	0/0:21,0:19:35.93:0,36,295	0/0:21,1:21:15.95:0,16,337	0/0:23,0:23:49.93:0,50,396	0/0:11,0:11:29.96:0,30,246	0/0:11,0:10:26.97:0,27,222	0/1:8,1:8:8.17:8,0,138	0/0:27,0:27:59.75:0,60,486	0/1:11,1:11:2.02:2,0,191	0/0:22,0:21:59.93:0,60,493	0/0:22,0:21:53.90:0,54,440	0/1:10,2:12:34.01:34,0,167
chr10	66504875	.	TTC	T	121.50	PASS	AB=0.949;AC=14;AF=0.259;AN=54;BaseQRankSum=3.568;DP=248;FS=56.206;HRun=0;HaplotypeScore=42.3998;InbreedingCoeff=-0.2001;MQ=67.15;MQ0=3;MQRankSum=0.809;QD=0.99;ReadPosRankSum=4.722;VQSLOD=-0.3133;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:5.82:0,6,52	0/0:2,0:2:5.03:0,5,30	0/0:17,0:8:14.82:0,15,157	0/0:5,0:2:5.99:0,6,59	0/1:15,0:15:6.52:7,0,115	0/0:12,0:12:15.74:0,16,127	0/0:5,0:5:11.65:0,12,95	0/0:15,0:14:27.30:0,27,195	0/0:6,0:6:10.89:0,11,80	0/0:15,0:15:23.62:0,24,187	0/1:9,1:10:35.63:36,0,103	0/1:4,1:5:13.58:40,0,14	0/1:3,0:3:12.19:12,0,43	0/1:2,1:3:18.36:24,0,18	0/1:4,0:4:8.62:9,0,17	0/1:10,0:10:25.05:25,0,26	0/1:20,1:19:64.12:64,0,70	0/1:13,0:13:14.81:15,0,25	0/0:9,0:8:20.05:0,20,125	0/0:7,0:7:18.38:0,18,141	1/1:3,0:3:3.84:13,4,0	./.	0/0:3,0:3:6.45:0,6,65	0/0:5,0:5:14.91:0,15,176	0/1:7,0:7:10.90:11,0,30	0/1:14,1:15:4.93:5,0,201	0/1:14,0:14:5.28:5,0,36	0/0:9,0:9:12.28:0,12,99
chr10	66504877	.	CTT	C	1870.72	PASS	AB=0.719;AC=41;AF=0.759;AN=54;BaseQRankSum=0.478;DP=252;FS=0.000;HRun=17;HaplotypeScore=35.7559;InbreedingCoeff=0.2866;MQ=62.20;MQ0=5;MQRankSum=0.640;QD=8.46;ReadPosRankSum=3.494;VQSLOD=-0.3448;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,0:15:16.17:69,16,0	1/1:1,0:2:2.74:12,3,0	0/0:16,0:6:9.03:0,9,112	0/0:5,0:2:3:0,3,26	1/1:7,8:15:3.55:135,4,0	0/1:4,5:11:3.37:58,0,3	1/1:4,1:5:2.91:24,3,0	0/1:10,0:14:25.96:29,0,26	0/1:5,1:6:13.81:18,0,14	1/1:7,7:14:20.67:166,21,0	1/1:7,4:11:7.59:63,8,0	1/1:3,3:5:8.96:71,9,0	0/0:5,0:5:11.02:0,11,91	1/1:3,0:3:5.89:41,6,0	1/1:2,3:5:8.95:71,9,0	1/1:3,8:10:17.89:142,18,0	1/1:9,11:19:38.56:296,39,0	1/1:1,10:13:16.80:188,17,0	1/1:4,1:8:10.20:52,10,0	1/1:4,3:7:2.72:23,3,0	1/1:0,3:3:5.99:48,6,0	./.	0/1:2,1:3:14.74:15,0,65	0/0:4,0:5:14.39:0,14,145	1/1:2,4:7:5.80:86,6,0	1/1:11,4:15:14.65:118,15,0	1/1:1,9:13:26.29:228,26,0	0/1:4,4:9:20.60:77,0,21
chr10	66505196	.	CATGT	C	1258.60	PASS	AB=1.000;AC=5;AF=0.093;AN=54;BaseQRankSum=6.628;DP=699;FS=7.347;HRun=0;HaplotypeScore=120.6664;InbreedingCoeff=0.7660;MQ=56.72;MQ0=12;MQRankSum=0.882;QD=14.81;ReadPosRankSum=-0.519;VQSLOD=2.8415;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:18,30:46:66.22:1045,66,0	1/1:1,8:9:21.07:332,21,0	0/0:31,0:21:6.02:0,6,110	./.	0/0:4,0:18:29.13:0,29,469	0/0:29,1:29:9.59:0,10,1148	0/0:16,0:16:27.09:0,27,642	0/0:49,0:46:57.06:0,57,765	0/0:21,0:21:39.13:0,39,902	0/0:44,0:43:81.23:0,81,1729	0/1:28,0:28:2.35:2,0,925	0/0:21,0:22:51.16:0,51,1142	0/0:30,0:30:69.24:0,69,1596	0/0:17,0:17:27.09:0,27,644	0/0:27,0:26:60.21:0,60,1353	0/0:23,0:23:54.19:0,54,1283	0/0:28,0:28:60.16:0,60,1332	0/0:20,0:20:42.14:0,42,956	0/0:20,0:20:9.03:0,9,195	0/0:23,0:23:36.12:0,36,856	0/0:23,0:23:41.21:0,41,1067	0/0:21,0:21:36.58:0,37,789	0/0:13,0:13:21.07:0,21,499	0/0:18,0:17:30.10:0,30,675	0/0:18,0:18:36.12:0,36,853	0/0:31,0:30:45.15:0,45,1043	0/0:41,0:41:72.18:0,72,1612	0/0:8,0:8:21.03:0,21,403
chr10	66505699	.	CTATTT	C	2664.79	PASS	AC=36;AF=0.692;AN=52;BaseQRankSum=2.650;DP=193;FS=1.504;HRun=0;HaplotypeScore=140.1293;InbreedingCoeff=0.6592;MQ=40.53;MQ0=0;MQRankSum=-1.856;QD=25.87;ReadPosRankSum=4.716;VQSLOD=3.0836;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,13:13:24.04:460,24,0	1/1:1,5:6:6.02:126,6,0	0/0:2,0:2:6.02:0,6,114	0/0:1,0:1:3.01:0,3,77	0/0:26,0:25:66.61:0,67,1555	1/1:0,1:1:3.01:63,3,0	1/1:0,2:2:3.01:63,3,0	0/0:14,0:14:33.11:0,33,984	1/1:0,5:5:6.02:126,6,0	1/1:2,7:9:12.43:206,12,0	1/1:2,9:11:15.05:314,15,0	1/1:1,4:5:9.03:189,9,0	0/0:6,0:6:17.98:0,18,397	1/1:0,2:2:6.02:126,6,0	1/1:1,5:6:3.01:63,3,0	1/1:2,4:6:3.01:63,3,0	./.	1/1:0,2:2:3.01:62,3,0	1/1:2,3:5:9.03:189,9,0	1/1:2,6:8:9.03:189,9,0	./.	0/0:16,0:16:39.13:0,39,976	0/0:20,0:20:45.11:0,45,1208	0/0:3,0:3:6.02:0,6,185	1/1:0,4:4:6.02:126,6,0	1/1:1,6:6:8.67:188,9,0	1/1:4,3:7:9.03:189,9,0	1/1:0,2:2:6.02:101,6,0
chr10	66505895	.	G	GTA	1164.63	PASS	AB=0.824;AC=10;AF=0.417;AN=24;BaseQRankSum=-2.096;DP=164;FS=5.356;HRun=0;HaplotypeScore=43.1355;InbreedingCoeff=0.4622;MQ=87.22;MQ0=2;MQRankSum=0.172;QD=14.93;ReadPosRankSum=-0.724;VQSLOD=2.1331;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:12,0:16:11.99:102,12,0	./.	0/0:11,0:8:2.80:0,3,20	0/0:11,0:9:5.65:0,6,46	1/1:10,5:19:27.04:325,27,0	./.	./.	0/1:16,19:35:76.41:796,0,76	0/1:2,0:2:0:0,0,0	./.	./.	./.	0/0:9,0:9:24.75:0,25,269	./.	1/1:3,0:3:3:25,3,0	./.	./.	1/1:2,0:2:1.88:23,2,0	./.	./.	./.	0/0:5,0:5:3.01:0,3,36	0/0:6,0:7:14.88:0,15,157	0/0:9,0:9:9.03:0,9,109	./.	./.	./.	./.
chr10	66505961	.	C	CA	6047.82	PASS	AB=0.537;AC=37;AF=0.661;AN=56;BaseQRankSum=-10.025;DP=328;FS=93.275;HRun=7;HaplotypeScore=45.6304;InbreedingCoeff=0.7882;MQ=83.74;MQ0=0;MQRankSum=-1.922;QD=32.17;ReadPosRankSum=5.471;VQSLOD=-0.5864;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,21:21:57.14:671,57,0	1/1:0,3:3:9.03:109,9,0	0/0:15,0:15:39.81:0,40,317	0/0:15,0:16:38.05:0,38,332	0/0:22,0:22:41.09:0,41,382	0/1:1,9:10:1.89:263,0,2	1/1:0,6:6:18.06:217,18,0	0/0:35,0:35:99:0,99,929	1/1:0,9:9:27.08:326,27,0	0/1:1,6:7:7.92:196,0,8	1/1:1,5:6:18.05:213,18,0	1/1:0,7:7:21.06:254,21,0	0/0:19,0:19:57.08:0,57,544	1/1:0,7:7:18.06:217,18,0	1/1:0,10:10:30.09:362,30,0	0/1:1,5:6:10.92:163,0,11	1/1:0,18:18:48.15:580,48,0	1/1:1,7:8:18.06:217,18,0	1/1:1,10:11:30.09:362,30,0	1/1:0,6:6:18.06:217,18,0	1/1:0,13:13:36.11:435,36,0	0/0:6,0:6:18.03:0,18,174	0/0:15,0:15:39.05:0,39,376	0/0:11,0:11:33.05:0,33,319	1/1:0,14:15:32.97:375,33,0	1/1:0,8:8:24.07:290,24,0	1/1:0,10:10:30.09:362,30,0	1/1:0,7:7:18.06:217,18,0
chr10	66506583	.	A	AT	8627.55	PASS	AB=1.000;AC=45;AF=0.804;AN=56;BaseQRankSum=-9.525;DP=494;FS=3.192;HRun=11;HaplotypeScore=51.8624;InbreedingCoeff=0.8270;MQ=71.13;MQ0=3;MQRankSum=-0.514;QD=20.89;ReadPosRankSum=2.732;VQSLOD=5.8830;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,17:26:22.27:413,22,0	1/1:0,5:5:12.02:122,12,0	0/1:16,0:13:5.02:5,0,78	0/0:21,0:14:9.44:0,9,73	1/1:3,20:23:33.80:503,34,0	1/1:4,24:29:62.96:623,63,0	1/1:6,10:16:27.05:274,27,0	1/1:8,25:34:72.06:696,72,0	1/1:1,15:17:42.08:426,42,0	1/1:3,15:19:47.88:460,48,0	1/1:3,16:19:42.08:426,42,0	1/1:2,15:17:41.23:451,41,0	0/0:17,0:17:44.82:0,45,348	1/1:1,10:11:33.07:334,33,0	1/1:3,14:18:35.94:350,36,0	1/1:0,19:19:51.10:518,51,0	1/1:3,11:14:32.74:316,33,0	1/1:2,13:15:33.07:335,33,0	1/1:7,18:25:51.09:512,51,0	1/1:3,9:12:0.70:159,1,0	1/1:1,15:16:45.09:457,45,0	0/0:11,0:11:32.85:0,33,251	0/0:16,0:16:32.84:0,33,255	0/0:15,1:16:8.42:0,8,248	1/1:3,5:8:12.02:122,12,0	1/1:7,14:22:44.89:427,45,0	1/1:4,19:23:51.10:516,51,0	1/1:0,9:9:18.04:183,18,0
chr10	66507443	.	GT	G	9215.34	PASS	AB=0.875;AC=45;AF=0.804;AN=56;BaseQRankSum=4.565;DP=498;FS=0.552;HRun=10;HaplotypeScore=49.8104;InbreedingCoeff=0.8742;MQ=75.23;MQ0=0;MQRankSum=-1.533;QD=20.94;ReadPosRankSum=1.831;VQSLOD=5.6635;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,27:31:71.97:625,72,0	1/1:1,7:8:20.99:182,21,0	0/0:13,0:13:11.99:0,12,121	0/1:6,1:7:27.96:28,0,140	1/1:2,33:35:89.97:781,90,0	1/1:2,22:24:53.99:469,54,0	1/1:3,18:21:50.99:443,51,0	1/1:8,31:39:89.91:773,90,0	1/1:3,11:14:15.34:266,15,0	1/1:4,17:21:50.96:438,51,0	1/1:2,13:15:38.99:339,39,0	1/1:1,16:17:38.99:339,39,0	0/0:9,0:9:24.06:0,24,265	1/1:2,12:14:35.98:313,36,0	1/1:1,12:13:32.99:287,33,0	1/1:2,14:16:35.98:313,36,0	1/1:3,16:19:44.99:391,45,0	1/1:0,14:14:38.99:339,39,0	1/1:1,11:12:32.99:286,33,0	1/1:3,21:24:60.87:523,61,0	1/1:4,13:17:38.97:339,39,0	0/0:7,0:7:21.06:0,21,232	0/0:16,0:16:42.08:0,42,450	0/0:13,0:13:36.10:0,36,398	1/1:2,20:22:56.98:495,57,0	1/1:6,22:28:65.97:573,66,0	1/1:0,11:11:29.99:260,30,0	1/1:2,16:18:47.98:417,48,0
chr10	66508012	.	C	CTT	24217.75	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-12.988;DP=626;FS=1.790;HRun=0;HaplotypeScore=61.8135;InbreedingCoeff=0.9498;MQ=67.19;MQ0=3;MQRankSum=-0.351;QD=46.57;ReadPosRankSum=2.090;VQSLOD=6.3688;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,45:46:93.28:1844,93,0	1/1:0,7:7:15.05:305,15,0	0/0:9,0:8:20.28:0,20,293	0/0:17,0:17:1.52:0,2,534	1/1:0,25:25:63.18:1234,63,0	1/1:0,26:27:63.22:1280,63,0	1/1:1,22:25:51.13:993,51,0	1/1:2,37:43:99:2364,129,0	1/1:1,23:24:36.08:902,36,0	1/1:0,24:24:72.20:1282,72,0	1/1:0,23:23:57.15:1108,57,0	1/1:0,13:13:27.09:548,27,0	0/0:18,0:18:54.17:0,54,851	1/1:0,11:12:27.09:548,27,0	1/1:0,24:24:45.15:914,45,0	1/1:1,14:15:39.13:792,39,0	1/1:0,28:28:69.24:1401,69,0	1/1:1,21:22:37.82:1020,38,0	1/1:3,29:32:96.31:1846,96,0	1/1:1,19:21:57.16:1093,57,0	1/1:0,22:22:45.15:914,45,0	0/0:16,0:16:48.14:0,48,756	0/0:18,0:18:54.17:0,54,856	0/0:28,0:28:84.27:0,84,1342	1/1:1,11:12:24.04:447,24,0	1/1:0,25:26:78.22:1435,78,0	1/1:2,25:28:63.22:1279,63,0	1/1:1,15:18:33.11:669,33,0
chr10	66508402	.	G	GA	1128.06	PASS	AB=0.982;AC=42;AF=0.750;AN=56;BaseQRankSum=0.650;DP=346;FS=4.879;HRun=10;HaplotypeScore=61.8542;InbreedingCoeff=0.2334;MQ=57.78;MQ0=7;MQRankSum=-2.011;QD=3.64;ReadPosRankSum=1.197;VQSLOD=-0.3426;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:20:7.68:29,8,0	1/1:11,0:11:9.12:45,9,0	0/1:12,0:6:11.25:11,0,29	0/1:16,0:7:10.56:11,0,58	1/1:19,0:18:19.92:99,20,0	1/1:4,7:11:15.87:100,16,0	0/1:17,0:17:21.99:49,0,22	1/1:13,0:10:1.11:20,1,0	0/1:12,0:10:0.63:28,0,1	1/1:9,1:9:14.04:91,14,0	1/1:10,0:8:14.37:60,14,0	1/1:12,0:12:3.33:44,3,0	0/0:7,0:6:8.63:0,9,40	0/1:6,0:5:2.39:8,0,2	1/1:11,0:11:7.42:38,7,0	1/1:11,2:11:20.41:132,20,0	0/1:16,0:15:17.94:18,0,20	1/1:9,0:9:9.74:47,10,0	1/1:11,0:10:17.51:99,18,0	1/1:10,0:10:7.03:45,7,0	1/1:6,2:8:12.31:81,12,0	0/0:9,0:9:11.07:0,11,45	0/1:10,1:11:6.44:6,0,34	0/0:20,0:18:19.75:0,20,90	1/1:11,0:11:5.54:32,6,0	1/1:17,0:17:14.32:82,14,0	0/1:14,1:15:0.41:29,0,0	1/1:9,0:9:13.39:81,13,0
chr10	66508406	.	C	CAA	2452.40	PASS	AB=0.826;AC=38;AF=0.679;AN=56;BaseQRankSum=-2.606;DP=361;FS=1.667;HRun=14;HaplotypeScore=67.0457;InbreedingCoeff=0.3041;MQ=59.93;MQ0=6;MQRankSum=-3.448;QD=8.29;ReadPosRankSum=0.111;VQSLOD=1.0526;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,0:20:6.48:58,6,0	1/1:9,1:11:18.86:183,19,0	0/1:15,0:8:16.93:17,0,46	0/0:18,0:9:15.60:0,16,93	1/1:12,1:19:5.96:47,6,0	1/1:9,2:12:13.89:124,14,0	0/1:12,4:17:27.24:47,0,27	0/0:10,0:9:2.56:0,3,12	0/1:10,2:10:12.83:125,0,13	1/1:7,4:11:12.01:98,12,0	1/1:5,7:10:18.94:234,19,0	0/1:12,2:14:8.26:133,0,8	0/0:7,0:6:11.72:0,12,88	1/1:8,0:7:16.53:165,17,0	1/1:9,4:13:21.44:244,21,0	1/1:13,1:11:25.59:223,26,0	0/1:12,1:14:8.55:54,0,9	1/1:5,1:6:9.37:72,9,0	1/1:4,5:8:15:161,15,0	0/1:3,7:10:0.97:68,0,1	1/1:8,3:11:11.65:97,12,0	0/0:10,0:10:14.29:0,14,110	0/1:9,0:9:4.07:4,0,85	0/0:18,0:17:23.47:0,23,186	1/1:4,8:12:3.01:40,3,0	0/1:7,10:17:8.10:239,0,8	1/1:8,10:17:8.91:77,9,0	1/1:4,4:9:12.80:119,13,0
chr10	66508850	.	TTTC	T	2491.10	PASS	AB=1.000;AC=44;AF=0.815;AN=54;BaseQRankSum=0.519;DP=279;FS=0.000;HRun=0;HaplotypeScore=46.5101;InbreedingCoeff=0.5929;MQ=58.94;MQ0=10;MQRankSum=-1.663;QD=10.25;ReadPosRankSum=0.079;VQSLOD=2.6980;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:15,1:16:9.59:78,10,0	1/1:5,1:6:14.79:127,15,0	0/0:22,0:10:10.48:0,10,194	0/1:31,0:13:0.22:0,0,159	1/1:0,14:12:30.45:413,30,0	1/1:2,9:11:6.01:78,6,0	1/1:8,0:7:14.94:120,15,0	1/1:22,0:22:48.25:337,48,0	1/1:5,0:5:7.20:46,7,0	1/1:6,0:6:14.04:93,14,0	1/1:6,0:6:5.93:40,6,0	1/1:6,0:6:5.92:39,6,0	0/0:2,0:2:6.02:0,6,91	0/1:4,0:4:28.57:29,0,36	1/1:4,0:4:5.93:40,6,0	1/1:5,0:5:12.46:107,12,0	1/1:25,0:23:42.97:303,43,0	1/1:14,2:16:18.81:189,19,0	1/1:5,3:7:14.45:121,14,0	1/1:9,0:7:9.79:63,10,0	1/1:4,0:4:2.97:20,3,0	./.	0/0:5,0:5:15.03:0,15,241	0/0:5,0:5:15.02:0,15,208	1/1:12,0:11:14.81:98,15,0	1/1:9,0:9:20.17:153,20,0	1/1:8,0:8:5.79:39,6,0	1/1:8,0:7:16.12:117,16,0
chr10	66508851	.	TTC	T	4161.01	PASS	AB=0.786;AC=44;AF=0.815;AN=54;BaseQRankSum=-0.630;DP=276;FS=0.825;HRun=0;HaplotypeScore=37.4829;InbreedingCoeff=0.5530;MQ=59.00;MQ0=10;MQRankSum=-1.646;QD=17.34;ReadPosRankSum=-0.083;VQSLOD=2.8843;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,14:16:7.37:171,7,0	1/1:1,5:6:14.99:180,15,0	0/0:22,0:10:10.34:0,10,165	0/1:30,0:13:8.18:8,0,115	1/1:14,0:12:30.44:294,30,0	1/1:9,1:10:6.02:76,6,0	1/1:6,2:7:14.99:162,15,0	1/1:0,22:22:54:635,54,0	1/1:4,1:5:8.94:104,9,0	1/1:1,5:6:16.20:184,16,0	1/1:5,1:6:5.98:65,6,0	1/1:0,6:6:6.02:89,6,0	0/0:2,0:2:5.89:0,6,60	0/1:1,3:4:33.18:54,0,33	1/1:0,4:4:6.02:91,6,0	1/1:4,1:5:14.97:140,15,0	1/1:15,9:22:49.19:538,49,0	1/1:12,4:16:20.96:261,21,0	1/1:7,1:7:17.90:179,18,0	1/1:1,8:7:11.95:131,12,0	1/1:0,4:4:3.01:45,3,0	./.	0/0:5,0:5:14.78:0,15,178	0/0:5,0:5:15.02:0,15,171	1/1:3,9:11:15.04:205,15,0	1/1:0,8:8:21.01:218,21,0	1/1:0,8:8:5.91:89,6,0	1/1:3,5:7:17.98:240,18,0
chr10	66508852	.	TC	T	3081.43	PASS	AB=0.984;AC=44;AF=0.815;AN=54;BaseQRankSum=0.738;DP=273;FS=1.798;HRun=1;HaplotypeScore=36.8639;InbreedingCoeff=0.5786;MQ=58.83;MQ0=12;MQRankSum=-2.053;QD=12.95;ReadPosRankSum=0.457;VQSLOD=2.2893;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:16:15.03:119,15,0	1/1:6,0:6:14.97:141,15,0	0/0:21,0:9:10.33:0,10,149	0/1:30,1:13:1.26:1,0,84	1/1:14,0:12:30.80:249,31,0	1/1:10,0:10:6.01:56,6,0	1/1:8,0:6:14.98:128,15,0	1/1:22,0:22:53.36:453,53,0	1/1:1,3:4:9.01:95,9,0	1/1:5,1:6:16.58:160,17,0	1/1:1,5:6:5.97:49,6,0	1/1:6,0:6:6.01:56,6,0	0/0:2,0:2:5.88:0,6,48	0/1:4,0:4:22.34:37,0,22	1/1:4,0:4:6.01:57,6,0	1/1:5,0:5:14.97:128,15,0	1/1:23,2:22:48.02:410,48,0	1/1:6,10:16:21.03:208,21,0	1/1:6,2:7:18.01:187,18,0	1/1:9,0:7:11.99:114,12,0	1/1:4,0:4:3:29,3,0	./.	0/0:5,0:5:5.63:0,6,107	0/0:5,0:5:15:0,15,137	1/1:9,1:9:14.97:133,15,0	1/1:8,0:8:21:188,21,0	1/1:8,0:8:5.64:56,6,0	1/1:6,2:7:18.03:181,18,0
chr10	66509543	.	G	GA	468.20	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-4.632;DP=404;FS=9.827;HRun=9;HaplotypeScore=40.5274;InbreedingCoeff=0.7345;MQ=68.30;MQ0=6;MQRankSum=-0.234;QD=21.28;ReadPosRankSum=-3.902;VQSLOD=1.8653;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:59.99:0,60,521	0/0:6,0:6:14.99:0,15,130	0/0:18,0:11:7.54:0,8,104	0/0:23,0:9:2:0,2,77	0/0:21,0:21:47.96:0,48,412	0/0:12,0:12:35.99:0,36,312	0/0:12,0:12:32.98:0,33,286	1/1:3,19:22:53.78:563,54,0	0/0:12,0:12:32.99:0,33,286	0/0:19,0:19:47.97:0,48,413	0/0:15,0:15:41.99:0,42,364	0/0:11,0:11:32.99:0,33,286	0/0:12,0:12:32.98:0,33,286	0/0:12,0:12:29.97:0,30,260	0/0:16,0:16:32.98:0,33,286	0/0:11,0:11:26.98:0,27,234	0/0:17,0:17:47.99:0,48,416	0/0:25,0:24:62.97:0,63,547	0/0:15,0:13:35.98:0,36,310	0/0:18,0:18:38.98:0,39,338	0/0:6,0:6:18:0,18,156	0/0:6,0:6:18:0,18,156	0/0:8,0:8:11.98:0,12,104	0/0:13,0:13:26.93:0,27,227	0/0:10,0:10:20.98:0,21,182	0/0:12,0:12:35.99:0,36,313	0/0:23,0:23:62.98:0,63,547	0/0:9,0:9:26.99:0,27,234
chr10	66509664	.	A	AT	137.55	PASS	AB=0.814;AC=2;AF=0.037;AN=54;BaseQRankSum=-2.158;DP=430;FS=11.527;HRun=9;HaplotypeScore=36.4491;InbreedingCoeff=0.1205;MQ=60.34;MQ0=4;MQRankSum=1.079;QD=4.05;ReadPosRankSum=-2.243;VQSLOD=-0.7100;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:92.95:0,93,802	0/0:2,0:2:3:0,3,26	0/0:3,0:1:1.25:0,1,3	./.	0/0:22,0:22:59.97:0,60,516	0/0:23,0:23:62.98:0,63,547	0/0:14,0:16:29.99:0,30,260	0/0:29,0:27:68.97:0,69,597	0/1:12,1:13:0.19:0,0,227	0/0:14,0:14:35.98:0,36,313	0/0:20,0:20:56.99:0,57,495	0/0:10,0:10:29.98:0,30,257	0/0:11,0:11:32.99:0,33,286	0/0:11,0:11:26.98:0,27,234	0/0:21,0:21:35.62:0,36,470	0/0:13,0:13:8.63:0,9,236	0/0:18,0:18:47.98:0,48,417	0/0:18,0:18:47.99:0,48,416	0/0:19,0:19:47.98:0,48,417	0/0:13,0:14:38.03:0,38,319	0/0:12,0:12:32.99:0,33,287	0/0:10,0:10:23.99:0,24,208	0/0:18,0:18:53.97:0,54,464	0/0:9,0:9:21:0,21,182	0/1:12,9:21:99:211,0,206	0/0:14,0:14:32.99:0,33,287	0/0:18,0:18:47.98:0,48,417	0/0:14,0:14:35.97:0,36,312
chr10	66510797	.	G	GA	9822.72	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-11.932;DP=524;FS=8.300;HRun=8;HaplotypeScore=44.5643;InbreedingCoeff=0.9753;MQ=58.93;MQ0=7;MQRankSum=-0.172;QD=25.32;ReadPosRankSum=0.327;VQSLOD=5.1266;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:93.04:0,93,850	0/0:11,0:11:23.99:0,24,215	0/0:8,0:4:12:0,12,108	0/0:5,0:3:9:0,9,80	1/1:9,18:26:48.14:552,48,0	1/1:4,19:23:45.09:504,45,0	1/1:1,16:17:45.05:490,45,0	1/1:8,26:34:81.07:856,81,0	1/1:4,13:16:27.04:297,27,0	1/1:3,25:27:75.20:854,75,0	1/1:3,17:20:45.09:502,45,0	1/1:6,7:13:15:158,15,0	0/0:19,0:17:48.01:0,48,435	1/1:0,10:10:24.07:277,24,0	1/1:0,9:9:27.08:312,27,0	1/1:2,17:18:23.68:527,24,0	1/1:8,19:25:48.14:553,48,0	1/1:2,18:20:51.15:589,51,0	1/1:3,25:27:72.21:830,72,0	1/1:6,15:21:39.96:433,40,0	1/1:0,9:10:23.90:257,24,0	0/0:15,0:15:42.02:0,42,384	0/0:27,0:27:63.01:0,63,572	0/0:16,0:16:44.98:0,45,403	1/1:1,21:22:54.16:623,54,0	1/1:3,16:19:45.13:519,45,0	1/1:3,17:19:48.14:554,48,0	1/1:0,4:4:12.04:138,12,0
chr10	66511474	.	AT	A	8966.78	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=7.644;DP=551;FS=2.745;HRun=11;HaplotypeScore=56.2351;InbreedingCoeff=0.9762;MQ=71.47;MQ0=1;MQRankSum=0.129;QD=20.20;ReadPosRankSum=1.129;VQSLOD=5.9656;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,24:26:68.92:567,69,0	1/1:1,7:8:14.98:123,15,0	0/0:18,0:16:17.62:0,18,158	0/0:11,1:9:8.68:0,9,53	1/1:2,28:31:76.91:621,77,0	1/1:1,21:22:62.93:517,63,0	1/1:2,5:7:14.97:123,15,0	1/1:3,21:24:59.88:486,60,0	1/1:0,17:17:41.95:345,42,0	1/1:2,21:23:59.87:487,60,0	1/1:2,22:24:59.91:493,60,0	1/1:0,13:13:35.96:296,36,0	0/0:21,0:21:44.20:0,44,563	1/1:4,9:13:23.96:197,24,0	1/1:1,11:12:32.95:271,33,0	1/1:3,16:19:41.95:345,42,0	1/1:2,17:19:50.94:419,51,0	1/1:1,19:20:47.94:394,48,0	1/1:2,17:20:55.25:418,55,0	1/1:2,36:38:99:846,105,0	1/1:0,10:10:26.97:222,27,0	0/0:15,0:15:20.51:0,21,423	0/0:28,1:29:59.50:0,60,825	0/0:10,0:10:27.07:0,27,288	1/1:2,19:21:47.94:394,48,0	1/1:3,26:29:77.89:641,78,0	1/1:1,28:29:71.92:591,72,0	1/1:6,13:19:20.92:172,21,0
chr10	66513214	.	A	AT	789.14	PASS	AB=0.950;AC=6;AF=0.107;AN=56;BaseQRankSum=3.080;DP=453;FS=18.291;HRun=10;HaplotypeScore=51.9284;InbreedingCoeff=0.6229;MQ=72.55;MQ0=0;MQRankSum=-1.522;QD=11.11;ReadPosRankSum=-3.110;VQSLOD=0.4043;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,108,879	0/0:8,0:8:23.97:0,24,197	0/0:12,0:12:8.84:0,9,103	0/1:11,0:11:7.44:7,0,43	1/1:1,19:20:51.13:544,51,0	0/0:7,0:7:17.98:0,18,148	0/0:14,0:13:29.96:0,30,246	1/1:8,0:31:65.98:361,66,0	0/0:11,0:12:35:0,35,277	0/0:20,0:20:53.93:0,54,443	0/0:26,0:26:58.93:0,59,474	0/0:14,0:14:32.96:0,33,271	0/0:13,0:13:29.96:0,30,246	0/0:9,0:9:6.91:0,7,155	0/0:22,0:22:44.92:0,45,369	0/0:14,0:15:37.98:0,38,300	0/0:24,0:25:55.95:0,56,449	0/1:8,1:9:8.01:8,0,148	0/0:14,0:14:29.95:0,30,246	0/0:18,1:19:38.93:0,39,320	0/0:11,0:11:26.94:0,27,219	0/0:14,0:14:26.96:0,27,222	0/0:12,0:12:32.96:0,33,271	0/0:11,0:11:26.96:0,27,222	0/0:14,0:14:35.92:0,36,291	0/0:24,0:24:68.92:0,69,566	0/0:13,0:14:31.99:0,32,252	0/0:11,0:11:26.97:0,27,222
chr10	66513294	.	C	CTTTT	6832.46	PASS	AB=0.945;AC=44;AF=0.786;AN=56;BaseQRankSum=-2.217;DP=450;FS=4.947;HRun=17;HaplotypeScore=109.8684;InbreedingCoeff=0.4542;MQ=70.18;MQ0=1;MQRankSum=1.684;QD=17.79;ReadPosRankSum=-4.852;VQSLOD=1.1188;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:30,3:33:60.88:735,61,0	1/1:8,0:8:18.06:264,18,0	0/1:22,0:16:7.53:8,0,16	0/0:10,0:7:1.13:0,1,18	0/1:23,0:28:50.22:93,0,50	1/1:4,0:16:4.83:40,5,0	1/1:6,4:9:8.99:142,9,0	0/0:9,0:30:45.88:0,46,356	1/1:15,0:15:34.35:519,34,0	1/1:10,13:26:39.24:617,39,0	1/1:4,12:19:32.95:430,33,0	1/1:3,0:6:3.01:35,3,0	0/0:10,0:10:5.01:0,5,67	1/1:9,3:13:3.01:62,3,0	1/1:13,0:13:24.04:298,24,0	1/1:7,0:15:8.10:57,8,0	1/1:13,0:13:28.86:371,29,0	1/1:8,0:8:18.03:245,18,0	1/1:10,3:15:18.35:235,18,0	1/1:11,0:11:18.05:264,18,0	1/1:12,0:12:27.09:437,27,0	0/0:15,0:15:25.02:0,25,277	0/1:11,0:14:17.05:17,0,62	0/1:8,0:8:3.97:4,0,12	1/1:17,0:17:39.09:591,39,0	1/1:9,12:24:48.76:645,49,0	1/1:17,0:16:33.11:493,33,0	1/1:4,9:17:14.91:232,15,0
chr10	66513619	.	GTC	G	1083.09	PASS	AB=1.000;AC=37;AF=0.740;AN=50;BaseQRankSum=2.472;DP=429;FS=0.893;HRun=0;HaplotypeScore=132.6506;InbreedingCoeff=0.6452;MQ=77.92;MQ0=3;MQRankSum=-5.819;QD=3.79;ReadPosRankSum=1.080;VQSLOD=2.7012;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,0:12:2.99:24,3,0	1/1:1,0:2:2.84:14,3,0	0/0:37,0:21:14.82:0,15,112	0/0:44,0:24:10.99:0,11,65	1/1:29,0:29:8.89:45,9,0	1/1:13,0:13:8.52:42,9,0	./.	1/1:17,11:28:35.69:277,36,0	1/1:10,0:10:11.36:56,11,0	1/1:20,0:20:42.68:225,43,0	1/1:17,0:17:5.68:28,6,0	1/1:14,0:14:2.84:14,3,0	0/0:4,0:4:12.01:0,12,145	./.	1/1:15,0:15:11.36:57,11,0	1/1:10,0:11:5.68:28,6,0	./.	1/1:6,0:6:2.84:14,3,0	1/1:11,0:12:11.62:68,12,0	1/1:15,0:15:2.84:14,3,0	0/1:12,0:12:0:0,0,0	0/0:7,0:7:3.33:0,3,125	0/0:8,0:8:12:0,12,123	0/0:10,0:10:8.98:0,9,73	1/1:16,0:16:8.52:42,9,0	1/1:24,0:23:27.60:143,28,0	1/1:20,0:19:17.04:84,17,0	1/1:9,0:10:8.97:69,9,0
chr10	66513633	.	CTCTCTCTATA	C	6438.88	PASS	AB=0.759;AC=36;AF=0.667;AN=54;BaseQRankSum=2.318;DP=421;FS=1.305;HRun=0;HaplotypeScore=145.0386;InbreedingCoeff=0.6514;MQ=80.58;MQ0=4;MQRankSum=-5.152;QD=25.96;ReadPosRankSum=4.584;VQSLOD=4.3227;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,6:12:9.02:135,9,0	1/1:1,1:2:3.01:101,3,0	0/0:41,0:20:28.26:0,28,407	0/0:61,0:30:15.76:0,16,254	0/1:28,0:28:9.68:122,0,10	1/1:1,11:12:9.03:304,9,0	0/0:4,11:15:0.47:0,0,1	0/0:24,0:24:65.64:0,66,1166	1/1:1,10:11:15.05:440,15,0	1/1:0,20:20:54.17:1459,54,0	1/1:1,16:17:6.02:203,6,0	1/1:3,9:12:3.01:101,3,0	0/0:6,0:6:18.06:0,18,669	./.	1/1:15,0:15:12.04:334,12,0	1/1:1,12:13:6.02:203,6,0	1/1:8,0:8:6.02:132,6,0	1/1:5,1:6:6.02:117,6,0	1/1:5,2:7:15.05:349,15,0	0/1:1,12:14:0.99:111,0,1	1/1:6,3:9:3:25,3,0	0/0:6,0:6:18.06:0,18,567	0/0:6,0:6:15.05:0,15,484	0/0:8,0:8:18.06:0,18,469	1/1:1,14:16:9.03:281,9,0	1/1:0,20:20:57.15:1207,57,0	1/1:1,16:18:18.06:585,18,0	1/1:5,2:7:9.03:228,9,0
chr10	66513635	.	CTCTCTATA	C	4568.20	PASS	AB=1.000;AC=37;AF=0.685;AN=54;BaseQRankSum=3.669;DP=406;FS=0.000;HRun=0;HaplotypeScore=139.2358;InbreedingCoeff=0.7178;MQ=81.67;MQ0=4;MQRankSum=-5.552;QD=19.03;ReadPosRankSum=5.231;VQSLOD=3.9171;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:11:6.01:86,6,0	1/1:2,0:2:3.01:64,3,0	0/0:41,0:20:5.93:0,6,218	0/0:59,0:28:15.79:0,16,218	1/1:1,26:27:11.56:332,12,0	1/1:12,0:12:9.03:194,9,0	0/0:12,0:12:0.47:0,0,1	0/0:21,0:22:14.83:0,15,622	1/1:11,0:11:15.05:293,15,0	1/1:20,0:20:54.15:930,54,0	1/1:17,0:17:6.02:129,6,0	1/1:9,0:9:3.01:64,3,0	0/0:6,0:6:18.06:0,18,480	./.	1/1:1,0:15:12.04:256,12,0	1/1:13,0:13:6.02:129,6,0	1/1:7,0:7:6.02:95,6,0	1/1:6,0:6:6.02:82,6,0	1/1:6,0:6:18.06:286,18,0	1/1:14,0:14:5.95:83,6,0	0/1:9,0:9:0:0,0,0	0/0:6,0:6:18.05:0,18,409	0/0:6,0:6:15.05:0,15,377	0/0:8,0:8:18:0,18,323	1/1:16,0:16:9.03:186,9,0	1/1:21,0:20:54.10:836,54,0	1/1:17,0:16:18.06:379,18,0	1/1:7,0:7:8.98:144,9,0
chr10	66516050	.	A	AT	652.99	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=0.948;DP=583;FS=0.593;HRun=0;HaplotypeScore=67.7361;InbreedingCoeff=0.3805;MQ=59.39;MQ0=29;MQRankSum=-0.035;QD=4.08;ReadPosRankSum=-1.159;VQSLOD=3.0150;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:61.53:0,62,665	0/0:8,0:8:20.90:0,21,158	0/1:55,0:16:26.98:27,0,157	0/1:49,0:10:9.50:13,0,9	1/1:0,26:26:59.65:628,60,0	0/0:19,0:19:44.91:0,45,599	0/0:14,0:14:38.97:0,39,415	0/1:30,0:30:16.64:107,0,17	0/0:10,0:9:26.97:0,27,284	0/0:20,0:18:53.12:0,53,629	0/0:27,0:26:67.94:0,68,737	0/0:16,0:16:40.21:0,40,423	0/0:9,0:9:24.02:0,24,279	0/0:12,0:11:33.09:0,33,424	0/0:11,0:10:26.98:0,27,289	0/0:10,0:10:30.02:0,30,348	0/0:35,0:34:84.31:0,84,968	0/0:17,0:15:37.15:0,37,356	0/0:16,0:16:45.01:0,45,473	0/0:16,0:16:42.78:0,43,540	0/0:11,0:11:24.03:0,24,277	0/0:10,0:10:26.88:0,27,243	0/0:13,0:13:37.55:0,38,420	0/0:9,0:8:17.95:0,18,185	0/0:17,0:15:42.02:0,42,474	0/0:19,0:19:54.08:0,54,615	0/0:35,0:34:93.37:0,93,973	0/0:33,0:31:90.14:0,90,1116
chr10	66516781	.	GTGCTGCTGC	G	2644.50	PASS	AC=18;AF=0.750;AN=24;BaseQRankSum=3.496;DP=338;FS=0.000;HRun=0;HaplotypeScore=87.6787;InbreedingCoeff=0.6874;MQ=57.36;MQ0=8;MQRankSum=-4.630;QD=16.43;ReadPosRankSum=-0.161;VQSLOD=1.8911;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:7,0:5:3.01:0,3,75	./.	./.	./.	./.	1/1:30,0:27:33.11:716,33,0	./.	1/1:9,2:11:3.01:81,3,0	./.	./.	1/1:8,6:14:6.02:139,6,0	0/0:19,0:21:17.93:0,18,635	1/1:14,4:17:9.03:242,9,0	1/1:5,10:15:21.07:536,21,0	1/1:12,7:18:12.04:302,12,0	1/1:17,10:27:8.76:218,9,0	1/1:11,3:14:3.01:81,3,0	./.	./.	./.	./.	./.	0/0:18,0:18:36.11:0,36,1319	./.	./.	1/1:6,6:13:18.06:442,18,0	./.
chr10	66517023	.	G	GGTTT	15981.49	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-7.852;DP=448;FS=0.000;HRun=0;HaplotypeScore=65.8369;InbreedingCoeff=0.9083;MQ=66.46;MQ0=1;MQRankSum=-2.786;QD=41.62;ReadPosRankSum=0.790;VQSLOD=4.8927;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,22:30:51.17:1256,51,0	1/1:2,6:7:9.03:221,9,0	0/0:17,0:14:23.92:0,24,302	0/0:9,0:8:15.05:0,15,249	1/1:6,11:17:36.12:817,36,0	1/1:2,14:17:36.12:856,36,0	1/1:5,13:18:33.11:760,33,0	1/1:10,21:31:60.07:1420,60,0	1/1:1,11:13:24.08:593,24,0	1/1:9,16:25:51.16:1144,51,0	1/1:3,9:13:30.10:703,30,0	1/1:8,7:16:21.07:513,21,0	0/0:15,0:15:45.15:0,45,749	1/1:3,6:9:15.05:363,15,0	1/1:2,9:11:17.95:445,18,0	1/1:2,11:14:30.10:741,30,0	1/1:5,29:35:60.21:1484,60,0	1/1:3,9:13:7.08:573,7,0	1/1:12,13:25:51.17:1136,51,0	1/1:5,8:13:21.07:447,21,0	1/1:5,13:20:24.08:585,24,0	0/0:11,0:11:21.07:0,21,354	0/0:5,0:5:6.02:0,6,101	0/0:7,0:7:14.64:0,15,212	1/1:5,5:10:12.04:297,12,0	1/1:4,11:16:36.05:711,36,0	1/1:13,10:23:33.10:770,33,0	1/1:3,3:6:6.02:147,6,0
chr10	66519231	.	C	CT	1137.79	PASS	AB=0.878;AC=32;AF=0.615;AN=52;BaseQRankSum=-3.190;DP=224;FS=2.953;HRun=2;HaplotypeScore=82.9837;InbreedingCoeff=0.0982;MQ=37.42;MQ0=1;MQRankSum=0.622;QD=5.83;ReadPosRankSum=-2.753;VQSLOD=-0.1871;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,8:12:3.95:64,4,0	0/1:1,1:2:12.29:26,0,12	0/1:2,0:2:0.52:1,0,1	./.	0/1:11,4:16:12.93:39,0,13	0/0:6,0:6:3.87:0,4,15	1/1:4,1:5:3.44:21,3,0	0/1:23,0:23:21.53:22,0,27	1/1:2,5:7:9.02:97,9,0	0/1:9,0:9:2.42:48,0,2	1/1:11,1:12:13.73:110,14,0	1/1:4,4:8:9.02:98,9,0	0/0:6,0:6:9.02:0,9,24	0/0:3,0:3:2.94:0,3,18	0/1:6,2:8:16.33:54,0,16	1/1:8,1:9:11.13:88,11,0	1/1:8,8:15:7.20:87,7,0	0/1:10,0:10:18.51:52,0,19	0/1:9,3:11:10.59:113,0,11	1/1:6,2:8:8.96:75,9,0	./.	0/0:3,0:3:3.63:0,4,10	0/0:8,0:8:10.63:0,11,29	0/1:6,0:6:0.24:20,0,0	0/1:6,3:9:6.28:85,0,6	1/1:10,1:11:9.39:62,9,0	1/1:4,2:6:8.46:83,8,0	1/1:2,1:4:3.75:42,4,0
chr10	66519269	.	TA	T	602.50	PASS	AB=0.594;AC=32;AF=0.727;AN=44;BaseQRankSum=3.127;DP=79;FS=0.000;HRun=1;HaplotypeScore=40.4763;InbreedingCoeff=0.1951;MQ=26.85;MQ0=0;MQRankSum=-0.756;QD=9.41;ReadPosRankSum=5.103;VQSLOD=1.0316;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:0,3:3:10.99:35,0,11	./.	./.	./.	1/1:1,4:4:4.24:27,4,0	0/0:1,4:5:8.94:0,9,66	1/1:0,3:1:2.98:22,3,0	1/1:1,6:7:14.83:104,15,0	1/1:0,3:3:8.97:70,9,0	1/1:0,3:2:5.91:38,6,0	0/1:1,3:4:10.99:36,0,11	1/1:0,4:3:5.97:44,6,0	1/1:0,4:4:11.93:88,12,0	./.	./.	0/0:1,0:1:0.89:0,1,2	1/1:1,4:5:2.98:22,3,0	1/1:0,4:4:8.93:63,9,0	0/1:2,1:3:13.52:14,0,14	1/1:0,2:2:5.98:46,6,0	./.	1/1:0,1:1:0.89:2,1,0	1/1:0,2:2:2.99:24,3,0	1/1:0,2:2:5.98:47,6,0	0/1:1,4:5:13:13,0,31	1/1:2,2:4:5.87:40,6,0	0/0:0,3:2:2.97:0,3,20	0/0:2,0:2:5.93:0,6,40
chr10	66519296	.	CA	C	430.26	PASS	AB=0.500;AC=23;AF=0.958;AN=24;BaseQRankSum=-0.867;DP=53;FS=0.000;HRun=1;HaplotypeScore=35.7712;InbreedingCoeff=-0.1599;MQ=25.14;MQ0=1;MQRankSum=0.289;QD=12.29;ReadPosRankSum=1.589;VQSLOD=1.9062;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,2:2:2.99:24,3,0	./.	./.	./.	./.	./.	./.	1/1:0,9:8:20.81:145,21,0	1/1:0,2:2:5.98:46,6,0	./.	1/1:0,3:3:5.99:50,6,0	1/1:0,2:1:2.99:24,3,0	1/1:1,3:4:8.98:72,9,0	./.	./.	./.	./.	0/1:0,2:2:13.99:16,0,14	1/1:1,3:2:5.89:37,6,0	1/1:0,2:2:2.99:24,3,0	./.	./.	./.	1/1:0,2:2:3:25,3,0	1/1:0,1:1:2.99:24,3,0	./.	1/1:0,2:1:2.99:24,3,0	./.
chr10	66519357	.	TG	T	566.65	PASS	AB=0.667;AC=30;AF=0.938;AN=32;BaseQRankSum=2.780;DP=67;FS=0.000;HRun=3;HaplotypeScore=31.1697;InbreedingCoeff=-0.1727;MQ=25.60;MQ0=0;MQRankSum=1.616;QD=9.14;ReadPosRankSum=1.940;VQSLOD=0.9276;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	1/1:0,3:3:3:25,3,0	1/1:0,3:2:5.97:44,6,0	1/1:0,5:4:2.99:24,3,0	0/1:2,5:7:25.01:50,0,25	1/1:0,2:1:2.99:23,3,0	1/1:1,4:4:8.93:67,9,0	1/1:3,5:8:8.98:72,9,0	./.	1/1:0,3:1:2.99:24,3,0	1/1:0,1:1:2.99:24,3,0	1/1:0,4:3:2.99:24,3,0	1/1:0,3:2:2.99:24,3,0	./.	./.	0/1:2,1:3:11.99:12,0,17	1/1:1,5:6:8.98:71,9,0	./.	1/1:0,2:2:2.99:24,3,0	./.	./.	1/1:0,4:3:8.96:67,9,0	./.	1/1:0,3:3:9:83,9,0	./.
chr10	66519543	.	GATTT	G	1152.56	PASS	AC=28;AF=0.636;AN=44;BaseQRankSum=4.780;DP=148;FS=0.000;HRun=0;HaplotypeScore=35.9751;InbreedingCoeff=0.5782;MQ=42.04;MQ0=5;MQRankSum=-5.197;QD=21.75;ReadPosRankSum=0.343;VQSLOD=2.5952;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,2:3:6.02:104,6,0	1/1:0,1:1:3.01:52,3,0	0/0:3,0:1:1.55:0,2,4	0/0:7,0:2:0.47:0,0,1	0/0:17,0:17:30.06:0,30,684	1/1:2,4:6:9:156,9,0	./.	0/0:18,0:14:21.07:0,21,470	1/1:1,2:3:6.02:104,6,0	./.	./.	./.	0/0:7,0:7:15.05:0,15,377	1/1:2,2:4:3.01:52,3,0	1/1:2,1:3:3.01:52,3,0	./.	1/1:4,3:7:9.03:156,9,0	./.	1/1:2,3:4:9.03:156,9,0	1/1:1,3:4:9.03:156,9,0	1/1:2,2:4:3.01:52,3,0	0/0:1,0:1:3.01:0,3,41	0/0:7,0:7:18.06:0,18,456	0/0:17,0:17:45.15:0,45,1143	1/1:3,2:5:6.02:104,6,0	1/1:2,1:2:3.01:52,3,0	1/1:1,2:2:3.01:52,3,0	1/1:1,1:1:3.01:52,3,0
chr10	66520257	.	G	GTC	5006.59	PASS	AB=0.616;AC=35;AF=0.625;AN=56;BaseQRankSum=-6.598;DP=569;FS=5.718;HRun=0;HaplotypeScore=78.9161;InbreedingCoeff=0.3329;MQ=63.12;MQ0=14;MQRankSum=0.516;QD=12.09;ReadPosRankSum=4.227;VQSLOD=3.6849;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,0:28:2.59:29,3,0	1/1:8,0:8:12.40:90,12,0	0/0:22,0:17:40.32:0,40,374	0/0:29,0:17:45.74:0,46,465	0/0:21,0:20:12.57:0,13,223	0/1:5,19:26:23.03:270,0,23	1/1:1,14:15:9:173,9,0	0/1:30,0:28:72.80:272,0,73	1/1:2,9:11:4.34:222,4,0	1/1:4,11:15:7.56:305,8,0	0/1:3,11:15:3.75:51,0,4	1/1:4,9:12:3.38:58,3,0	0/0:16,0:16:35.95:0,36,332	1/1:3,22:25:12.04:232,12,0	1/1:13,5:18:24.44:545,24,0	0/1:3,12:15:11.86:320,0,12	1/1:5,18:23:1.85:117,2,0	0/1:1,9:10:0.78:107,0,1	1/1:17,2:17:1:380,1,0	1/1:4,13:17:1.17:265,1,0	0/1:14,39:54:34.14:291,0,34	0/0:15,0:14:26.95:0,27,265	0/0:24,0:24:41.96:0,42,480	0/0:28,0:28:71.91:0,72,683	0/1:3,15:18:36.78:156,0,37	1/1:0,16:16:31.23:255,31,0	1/1:3,11:15:5.85:329,6,0	1/1:4,16:20:30.09:538,30,0
chr10	66521620	.	TGACCCAACTTGGGTGCTG	T	23982.18	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=15.750;DP=468;FS=44.156;HRun=0;HaplotypeScore=236.9284;InbreedingCoeff=0.9694;MQ=74.82;MQ0=0;MQRankSum=-15.000;QD=93.32;ReadPosRankSum=6.223;VQSLOD=2.8474;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,126,10431	0/0:7,0:7:21.07:0,21,1849	0/0:18,0:18:48.16:0,48,3010	0/0:18,0:19:17.68:0,18,2981	0/0:16,0:16:45.15:0,45,3561	1/1:1,18:19:51.18:2651,51,0	1/1:6,8:14:21.07:985,21,0	0/0:28,0:28:84.29:0,84,5577	1/1:6,11:17:24.08:1248,24,0	1/1:5,7:12:24.08:1247,24,0	1/1:2,11:13:24.08:1247,24,0	1/1:6,11:17:18.06:936,18,0	0/0:25,0:25:72.23:0,72,5819	1/1:2,14:16:36.12:1871,36,0	1/1:5,14:19:42.14:2183,42,0	1/1:3,15:18:39.13:2027,39,0	1/1:3,5:8:12.04:458,12,0	1/1:2,5:7:9.03:468,9,0	1/1:6,7:13:21.07:749,21,0	1/1:3,9:12:27.09:1403,27,0	1/1:5,10:15:15.05:410,15,0	0/0:16,0:16:48.16:0,48,3875	0/0:17,0:17:48.16:0,48,3327	0/0:21,0:21:60.21:0,60,4713	1/1:1,6:7:18.06:936,18,0	1/1:1,14:15:45.15:2165,45,0	1/1:4,23:27:51.17:2532,51,0	1/1:2,6:8:9.03:468,9,0
chr10	66522104	.	T	TA	5273.83	PASS	AB=0.718;AC=41;AF=0.732;AN=56;BaseQRankSum=-5.846;DP=445;FS=1.810;HRun=13;HaplotypeScore=48.5083;InbreedingCoeff=0.6503;MQ=69.99;MQ0=1;MQRankSum=-2.229;QD=14.25;ReadPosRankSum=1.581;VQSLOD=5.5122;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,18:27:19.76:396,20,0	1/1:0,5:5:15.02:139,15,0	0/1:12,0:9:4.59:5,0,33	0/0:6,0:5:4.67:0,5,18	1/1:8,4:24:40.74:263,41,0	1/1:1,15:16:9.40:221,9,0	1/1:4,6:11:14.18:161,14,0	0/0:29,1:32:44.59:0,45,436	1/1:5,20:27:51.78:462,52,0	1/1:5,14:20:42.36:378,42,0	1/1:3,11:15:32.90:281,33,0	1/1:6,7:13:12.01:112,12,0	0/0:6,0:8:12.97:0,13,73	1/1:8,13:22:24.41:356,24,0	1/1:2,12:14:24.03:223,24,0	0/1:2,10:12:5.57:96,0,6	1/1:5,19:24:27.53:398,28,0	1/1:3,14:17:24.03:223,24,0	1/1:12,5:16:26.91:233,27,0	0/1:6,11:17:13.87:168,0,14	1/1:2,7:10:5.13:67,5,0	0/0:7,0:7:14.85:0,15,103	0/0:9,1:14:3.87:0,4,131	0/0:8,0:8:20.83:0,21,144	1/1:2,13:15:36.04:334,36,0	1/1:7,9:17:12.30:241,12,0	1/1:3,9:12:21.01:189,21,0	1/1:9,12:21:6.44:328,6,0
chr10	66522204	.	CTGTT	C	612.63	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.306;DP=557;FS=0.000;HRun=0;HaplotypeScore=90.3816;InbreedingCoeff=0.9685;MQ=73.35;MQ0=0;MQRankSum=-0.782;QD=29.17;ReadPosRankSum=1.735;VQSLOD=3.1176;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,150,3769	0/0:6,0:6:15.05:0,15,392	0/0:18,0:18:36.12:0,36,876	0/0:23,0:23:60.09:0,60,1393	1/1:2,19:21:38.49:707,38,0	0/0:16,0:16:45.15:0,45,1150	0/0:27,0:27:72.25:0,72,1882	0/0:28,0:28:69.23:0,69,1682	0/0:18,0:18:51.18:0,51,1324	0/0:18,0:18:51.18:0,51,1299	0/0:14,0:14:39.13:0,39,981	0/0:20,0:20:60.21:0,60,1571	0/0:18,0:18:51.18:0,51,1308	0/0:22,0:22:63.22:0,63,1649	0/0:20,0:20:60.21:0,60,1555	0/0:17,0:17:48.16:0,48,1254	0/0:19,0:19:54.17:0,54,1359	0/0:18,0:18:51.18:0,51,1286	0/0:17,0:17:48.16:0,48,1158	0/0:19,0:19:54.19:0,54,1414	0/0:39,0:39:99:0,111,2889	0/0:14,0:14:39.10:0,39,912	0/0:11,0:11:33.11:0,33,823	0/0:27,0:27:81.28:0,81,2122	0/0:11,0:11:33.11:0,33,827	0/0:23,0:23:51.18:0,51,1336	0/0:15,0:15:36.11:0,36,859	0/0:5,0:5:15.05:0,15,385
chr10	66522316	.	T	TTCC	591.88	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-4.276;DP=666;FS=1.026;HRun=0;HaplotypeScore=128.6231;InbreedingCoeff=0.9833;MQ=76.38;MQ0=0;MQRankSum=1.498;QD=21.14;ReadPosRankSum=-3.234;VQSLOD=2.9735;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:90.25:0,90,1281	0/0:5,0:5:15.05:0,15,221	0/0:28,0:24:42.98:0,43,544	0/0:29,0:28:51.12:0,51,668	0/0:31,0:31:66.12:0,66,903	0/0:26,0:26:66.20:0,66,933	0/0:28,0:28:72.22:0,72,1022	1/1:14,11:27:42.07:687,42,0	0/0:21,0:21:51.15:0,51,717	0/0:31,0:31:83.94:0,84,1134	0/0:14,0:14:36.11:0,36,511	0/0:23,0:23:60.19:0,60,864	0/0:16,0:16:42.14:0,42,618	0/0:25,0:25:54.14:0,54,729	0/0:30,0:30:90.27:0,90,1268	0/0:22,0:22:57.16:0,57,816	0/0:30,0:30:74.46:0,74,1067	0/0:16,0:16:28.71:0,29,413	0/0:22,0:22:33.09:0,33,440	0/0:20,0:20:51.17:0,51,744	0/0:18,0:18:51.17:0,51,751	0/0:16,0:16:45.13:0,45,626	0/0:20,0:20:51.13:0,51,683	0/0:40,0:40:99:0,102,1474	0/0:22,0:22:63.21:0,63,927	0/0:19,0:19:42.06:0,42,591	0/0:26,0:26:66.22:0,66,958	0/0:21,0:21:45.15:0,45,663
chr10	66522366	.	TTG	T	747.96	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.820;DP=676;FS=0.732;HRun=0;HaplotypeScore=157.1009;InbreedingCoeff=0.9853;MQ=86.91;MQ0=0;MQRankSum=-6.190;QD=24.93;ReadPosRankSum=-3.427;VQSLOD=3.0754;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:37:99:0,111,1184	0/0:6,0:6:18.04:0,18,188	0/0:31,0:31:93.28:0,93,1710	0/0:28,0:27:72.24:0,72,1373	1/1:0,30:30:66.19:843,66,0	0/0:21,0:21:39.17:0,39,609	0/0:30,0:30:90.18:0,90,922	0/0:20,0:20:60.20:0,60,1180	0/0:19,0:19:57.13:0,57,602	0/0:30,0:30:87.10:0,87,845	0/0:16,0:16:48.11:0,48,505	0/0:25,0:25:72.15:0,72,744	0/0:20,0:20:60.21:0,60,1214	0/0:19,0:19:57.13:0,57,596	0/0:33,0:33:45.23:0,45,873	0/0:31,0:31:86.11:0,86,889	0/0:26,0:26:78.19:0,78,830	0/0:12,0:12:36.09:0,36,394	0/0:14,0:14:19.07:0,19,350	0/0:20,0:20:32.15:0,32,547	0/0:28,0:28:80.65:0,81,847	0/0:22,0:22:66.23:0,66,1329	0/0:24,0:24:72.25:0,72,1459	0/0:33,0:33:99:0,99,1963	0/0:23,0:23:69.15:0,69,724	0/0:27,0:27:81.11:0,81,786	0/0:28,0:28:84.20:0,84,898	0/0:22,0:22:66.16:0,66,696
chr10	66522369	.	AGTT	A	488.21	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.599;DP=675;FS=0.000;HRun=0;HaplotypeScore=172.9884;InbreedingCoeff=0.9843;MQ=85.92;MQ0=0;MQRankSum=-7.541;QD=16.83;ReadPosRankSum=-1.204;VQSLOD=2.6548;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:38:99:0,114,2502	0/0:6,0:6:15.05:0,15,340	0/0:31,0:31:81.28:0,81,1771	0/0:28,0:27:72.25:0,72,1496	1/1:4,25:29:62.04:583,62,0	0/0:21,0:21:63.18:0,63,1340	0/0:30,0:30:84.27:0,84,1857	0/0:19,0:19:51.17:0,51,1100	0/0:19,0:19:57.20:0,57,1292	0/0:30,0:30:84.25:0,84,1853	0/0:18,0:18:54.14:0,54,1148	0/0:24,0:24:72.21:0,72,1475	0/0:20,0:20:60.19:0,60,1308	0/0:19,0:19:57.20:0,57,1290	0/0:31,0:31:84.26:0,84,1775	0/0:29,0:29:84.27:0,84,1859	0/0:26,0:26:75.22:0,75,1610	0/0:13,0:13:39.13:0,39,855	0/0:14,0:14:36.12:0,36,814	0/0:18,0:18:51.18:0,51,1134	0/0:28,0:28:84.29:0,84,1902	0/0:22,0:22:66.23:0,66,1469	0/0:24,0:24:72.25:0,72,1625	0/0:32,0:32:93.30:0,93,2034	0/0:23,0:23:69.24:0,69,1564	0/0:29,0:29:87.29:0,87,1883	0/0:29,0:29:81.26:0,81,1791	0/0:24,0:24:72.25:0,72,1600
chr10	66522763	.	G	GTT	7747.67	PASS	AB=0.967;AC=42;AF=0.750;AN=56;BaseQRankSum=4.437;DP=378;FS=0.000;HRun=8;HaplotypeScore=95.0901;InbreedingCoeff=0.7197;MQ=80.77;MQ0=2;MQRankSum=-8.033;QD=27.18;ReadPosRankSum=1.477;VQSLOD=4.5870;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:12,0:22:51.10:270,51,0	1/1:1,0:3:5.50:36,5,0	0/1:27,0:14:8.24:8,0,65	0/0:30,0:20:19.79:0,20,132	0/1:13,0:13:24.86:25,0,58	1/1:4,12:16:42.14:645,42,0	1/1:2,6:10:27.03:358,27,0	0/0:29,0:29:71.89:0,72,688	1/1:2,8:11:29.59:422,30,0	1/1:2,8:10:27.06:399,27,0	1/1:6,15:21:61.99:896,62,0	1/1:7,4:11:21.05:300,21,0	0/0:10,0:10:20.96:0,21,223	1/1:1,4:5:6.02:94,6,0	1/1:2,5:8:15.05:235,15,0	1/1:5,4:9:21.07:325,21,0	1/1:4,10:13:30.10:470,30,0	1/1:5,5:10:17.83:283,18,0	1/1:5,8:15:2.67:474,3,0	1/1:4,11:15:39.13:603,39,0	1/1:3,2:5:6.02:95,6,0	0/0:6,0:6:14.99:0,15,150	0/0:13,0:13:39.09:0,39,424	0/0:5,0:5:9.02:0,9,100	1/1:5,12:17:36.12:561,36,0	1/1:7,9:16:38.45:549,38,0	1/1:12,3:15:36.07:471,36,0	1/1:4,3:8:18.04:228,18,0
chr10	66522771	.	TG	T	1108.37	PASS	AB=0.970;AC=22;AF=0.393;AN=56;BaseQRankSum=2.073;DP=401;FS=0.437;HRun=1;HaplotypeScore=105.0645;InbreedingCoeff=-0.2714;MQ=67.61;MQ0=3;MQRankSum=-2.544;QD=3.77;ReadPosRankSum=-1.214;VQSLOD=-0.3963;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:21:34.88:35,0,102	0/0:4,0:4:3.87:0,4,17	0/0:27,1:12:10.66:0,11,92	0/1:20,2:12:10.24:10,0,62	0/0:11,1:11:16.12:0,16,169	0/1:16,0:16:22.61:35,0,23	0/1:11,0:11:23.22:41,0,23	0/0:30,0:30:61.51:0,62,841	0/1:14,1:15:9.78:70,0,10	0/1:11,0:11:28.30:28,0,36	0/1:25,2:27:30.65:146,0,31	1/1:11,0:11:4.30:76,4,0	0/0:10,0:10:22.54:0,23,262	0/1:5,0:5:3.28:20,0,3	0/1:7,0:7:13.96:14,0,18	0/1:12,0:12:2.72:81,0,3	0/1:16,0:15:18.25:31,0,18	0/1:7,4:11:25.77:26,0,28	0/1:19,0:19:68.96:69,0,85	0/1:23,0:23:25.15:154,0,25	0/1:6,0:6:5.36:16,0,5	0/0:6,0:6:18.02:0,18,186	0/0:14,0:14:42.11:0,42,505	0/0:3,0:3:9.03:0,9,108	0/1:16,0:16:10.26:75,0,10	0/1:16,1:17:70.57:71,0,74	0/1:18,0:18:5.97:165,0,6	1/1:7,1:8:21.39:108,21,0
chr10	66522772	.	G	GT	2570.09	PASS	AB=0.739;AC=20;AF=0.357;AN=56;BaseQRankSum=1.654;DP=406;FS=0.000;HRun=8;HaplotypeScore=102.8108;InbreedingCoeff=-0.3708;MQ=67.50;MQ0=3;MQRankSum=-5.032;QD=9.45;ReadPosRankSum=1.587;VQSLOD=1.9828;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:21:17.05:0,17,71	0/0:4,0:4:6.15:0,6,29	0/0:28,0:12:7.01:0,7,80	0/1:22,0:12:22.90:23,0,63	0/0:14,0:13:16.92:0,17,126	0/1:7,2:16:34.57:196,0,35	0/1:6,2:11:58.40:94,0,58	0/0:31,0:31:43.29:0,43,472	0/1:5,5:15:25.71:222,0,26	0/1:9,0:11:83.13:91,0,83	0/1:16,7:29:77.25:252,0,77	0/1:3,6:11:3:138,0,3	0/0:10,0:10:19.07:0,19,199	0/1:3,0:4:7.13:56,0,7	0/1:4,1:7:29.10:73,0,29	0/1:7,4:12:19.69:79,0,20	0/1:12,0:15:53.49:166,0,53	0/1:10,0:11:49.81:50,0,55	0/1:9,6:19:99:248,0,130	0/1:10,11:23:66.04:308,0,66	0/1:3,3:6:22.75:23,0,23	0/0:7,0:7:12.02:0,12,122	0/0:14,0:14:42.09:0,42,428	0/0:3,0:3:9.02:0,9,91	0/1:9,0:16:49.30:250,0,49	0/1:12,4:17:99:103,0,145	0/1:16,0:18:14.82:160,0,15	1/1:2,3:8:21.88:203,22,0
chr10	66522779	.	G	GTTTT	4072.68	PASS	AB=0.985;AC=26;AF=0.464;AN=56;BaseQRankSum=6.829;DP=402;FS=9.240;HRun=11;HaplotypeScore=114.5347;InbreedingCoeff=-0.3687;MQ=66.61;MQ0=3;MQRankSum=-5.608;QD=12.49;ReadPosRankSum=3.720;VQSLOD=0.0441;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:19:2.16:104,2,0	0/0:4,0:4:2.29:0,2,5	0/0:27,0:11:1.16:0,1,45	0/0:19,0:12:7.25:0,7,72	1/1:3,0:15:19.66:225,20,0	0/1:15,0:16:25.62:394,0,26	0/1:8,0:8:16.92:142,0,17	1/1:11,17:30:56.91:794,57,0	0/1:13,0:13:82.16:280,0,82	0/1:14,0:14:84.11:87,0,84	0/1:27,0:28:99:395,0,207	0/1:10,0:11:68.86:139,0,69	0/1:10,0:10:10.22:10,0,107	0/1:4,0:4:25.41:46,0,25	1/1:7,0:7:6.02:103,6,0	0/1:9,0:9:19.55:98,0,20	0/1:19,0:18:99:279,0,100	0/1:12,0:12:4.08:46,0,4	0/1:18,0:19:77.86:179,0,78	0/1:25,0:26:99:111,0,298	0/1:8,0:8:16.21:43,0,16	0/0:6,0:6:18.04:0,18,225	0/0:15,0:15:36.04:0,36,457	0/0:4,0:4:12.04:0,12,157	0/1:17,0:17:22.35:363,0,22	0/1:13,0:13:36.61:37,0,89	0/1:17,0:17:28.30:28,0,211	0/1:8,0:8:59.17:171,0,59
chr10	66522882	.	AT	A	5599.34	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=4.734;DP=380;FS=8.966;HRun=9;HaplotypeScore=36.0210;InbreedingCoeff=0.8336;MQ=65.49;MQ0=14;MQRankSum=2.094;QD=20.66;ReadPosRankSum=3.065;VQSLOD=4.7417;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,11:17:30:274,30,0	1/1:1,4:5:12:110,12,0	0/0:37,0:9:4.51:0,5,34	0/0:28,0:6:4.97:0,5,42	1/1:0,18:18:54:484,54,0	1/1:1,17:18:42.02:384,42,0	1/1:2,10:12:30.02:274,30,0	0/0:24,0:24:51.12:0,51,568	1/1:0,1:1:3:27,3,0	1/1:1,14:15:42.02:384,42,0	1/1:3,10:13:29.91:274,30,0	1/1:1,2:2:6:55,6,0	0/0:8,0:8:21.05:0,21,233	1/1:0,8:8:15.01:137,15,0	1/1:0,5:5:12.01:110,12,0	1/1:0,5:5:9:82,9,0	1/1:2,24:26:60.03:549,60,0	1/1:2,8:10:15.92:161,16,0	1/1:3,14:17:39:352,39,0	1/1:8,10:18:36.01:329,36,0	1/1:0,8:8:24.01:220,24,0	0/0:1,0:1:3.01:0,3,35	0/0:4,0:4:12.02:0,12,127	0/0:7,0:7:21.06:0,21,242	1/1:2,14:16:26.93:247,27,0	1/1:2,14:16:39.01:357,39,0	1/1:3,18:21:44.97:403,45,0	1/1:0,18:18:42.02:384,42,0
chr10	66523460	.	G	GAGAC	567.99	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-0.066;DP=706;FS=6.225;HRun=0;HaplotypeScore=128.3599;InbreedingCoeff=0.9796;MQ=81.22;MQ0=3;MQRankSum=0.662;QD=33.41;ReadPosRankSum=-2.050;VQSLOD=2.8359;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:60.18:0,60,967	0/0:9,0:9:21.07:0,21,328	0/0:58,0:46:27.49:0,27,1061	0/0:82,0:57:71.71:0,72,925	1/1:4,13:17:27.09:662,27,0	0/0:23,0:23:51.17:0,51,851	0/0:27,0:27:60.17:0,60,943	0/0:28,0:28:39.13:0,39,650	0/0:13,0:13:27.09:0,27,453	0/0:25,0:25:60.19:0,60,956	0/0:17,0:17:45.15:0,45,753	0/0:23,0:23:60.15:0,60,971	0/0:26,0:24:66.19:0,66,1052	0/0:21,0:21:48.15:0,48,779	0/0:27,0:27:63.20:0,63,1021	0/0:10,0:10:24.08:0,24,403	0/0:38,0:38:87.27:0,87,1399	0/0:11,0:11:18.06:0,18,297	0/0:21,0:21:51.16:0,51,818	0/0:15,0:15:36.11:0,36,575	0/0:24,0:24:57.13:0,57,891	0/0:11,0:11:30.10:0,30,502	0/0:13,0:13:27.09:0,27,453	0/0:35,0:35:87.25:0,87,1421	0/0:25,0:25:63.20:0,63,1029	0/0:26,0:26:57.10:0,57,870	0/0:42,0:42:93.30:0,93,1527	0/0:13,0:13:24.08:0,24,403
chr10	66523702	.	T	TTTG	3422.29	PASS	AB=0.877;AC=30;AF=0.536;AN=56;BaseQRankSum=-4.996;DP=545;FS=66.404;HRun=0;HaplotypeScore=89.5700;InbreedingCoeff=0.1253;MQ=43.80;MQ0=52;MQRankSum=-0.234;QD=7.62;ReadPosRankSum=-2.735;VQSLOD=-0.5375;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:25:13.16:178,13,0	1/1:10,0:9:14.57:110,15,0	0/0:17,0:3:3:0,3,28	0/1:27,0:3:0.49:0,0,21	0/0:9,0:18:4.15:0,4,14	0/1:24,0:23:7.73:240,0,8	0/1:11,0:22:8.35:8,0,33	0/0:12,0:10:29.82:0,30,228	0/1:17,0:15:39.18:128,0,39	1/1:18,0:17:41.29:300,41,0	0/1:6,13:19:17.88:98,0,18	0/1:12,0:11:38.06:121,0,38	0/0:11,0:9:26.89:0,27,226	1/1:12,0:12:23.68:238,24,0	0/1:12,0:22:18.84:65,0,19	0/1:20,0:17:20.61:105,0,21	0/1:36,0:33:61.92:285,0,62	1/1:20,0:16:22.84:176,23,0	1/1:26,0:22:38.32:288,38,0	1/1:20,0:27:43.47:283,43,0	1/1:8,0:6:14.75:104,15,0	0/0:5,0:4:5.94:0,6,46	0/0:8,0:8:11.95:0,12,102	0/0:23,0:20:38.69:0,39,329	0/1:7,10:18:33.45:44,0,33	1/1:28,0:26:39.02:309,39,0	0/1:27,0:26:17.67:247,0,18	0/1:24,0:15:13.88:96,0,14
chr10	66524780	.	C	CTT	11298.93	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-4.565;DP=450;FS=0.646;HRun=9;HaplotypeScore=53.5515;InbreedingCoeff=0.8971;MQ=75.18;MQ0=0;MQRankSum=-2.101;QD=28.60;ReadPosRankSum=2.147;VQSLOD=4.6834;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,10:13:22.89:317,23,0	1/1:2,10:12:24.08:370,24,0	0/0:11,0:12:10:0,10,92	0/0:5,0:7:0.93:0,1,71	1/1:6,0:24:43.37:158,43,0	1/1:2,14:18:32.59:453,33,0	1/1:2,0:2:3.01:46,3,0	1/1:3,0:26:55.05:205,55,0	1/1:3,11:14:24.08:369,24,0	1/1:7,20:28:71.72:1033,72,0	1/1:1,19:21:59.95:765,60,0	1/1:4,7:12:18.06:277,18,0	0/0:10,0:10:21.05:0,21,223	1/1:1,14:15:30.10:462,30,0	1/1:2,16:18:39.13:600,39,0	1/1:3,8:12:23.56:316,24,0	1/1:0,10:10:27.09:416,27,0	1/1:1,9:10:21.07:323,21,0	1/1:4,19:23:60.16:870,60,0	1/1:0,24:24:72.13:1005,72,0	1/1:2,10:15:26.06:323,26,0	0/0:5,0:5:15.04:0,15,160	0/0:11,0:11:27.04:0,27,279	0/0:10,0:9:30.08:0,30,319	1/1:0,14:15:39.13:601,39,0	1/1:5,18:24:62.48:801,62,0	1/1:6,23:31:56.66:804,57,0	1/1:4,22:27:53.67:786,54,0
chr10	66524908	.	AT	A	227.46	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=4.494;DP=441;FS=9.415;HRun=9;HaplotypeScore=45.9157;InbreedingCoeff=0.6322;MQ=73.50;MQ0=4;MQRankSum=0.722;QD=6.15;ReadPosRankSum=-0.596;VQSLOD=-0.0305;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:60.16:0,60,678	0/0:3,0:3:9.03:0,9,104	0/0:29,0:12:18.06:0,18,248	0/1:25,0:13:8.13:8,0,143	1/1:0,12:12:35.97:320,36,0	0/0:8,0:8:21.05:0,21,232	0/0:10,0:10:24.07:0,24,277	0/0:30,0:30:81.15:0,81,889	0/0:14,0:14:33.10:0,33,381	0/0:26,0:26:75.22:0,75,865	0/0:21,0:21:60.18:0,60,692	0/0:14,0:14:36.11:0,36,415	0/0:9,0:9:18.05:0,18,208	0/0:11,0:11:30.07:0,30,328	0/0:11,0:11:33.10:0,33,381	0/0:7,0:7:21.06:0,21,242	0/0:22,0:22:66.20:0,66,760	0/0:12,0:12:33.09:0,33,371	0/0:15,0:15:42.11:0,42,475	0/0:21,0:22:53.98:0,54,595	0/0:19,0:19:57.13:0,57,635	0/0:5,0:5:15.03:0,15,163	0/0:20,0:20:60.18:0,60,692	0/0:18,0:18:51.11:0,51,558	0/0:15,0:15:42.10:0,42,464	0/0:19,0:18:54.10:0,54,593	0/0:13,0:13:39.04:0,39,422	0/0:8,0:8:24.07:0,24,277
chr10	66525228	.	A	AT	5927.54	PASS	AB=0.661;AC=34;AF=0.607;AN=56;BaseQRankSum=-8.478;DP=483;FS=1.419;HRun=12;HaplotypeScore=60.6561;InbreedingCoeff=0.4855;MQ=77.11;MQ0=0;MQRankSum=-1.993;QD=16.51;ReadPosRankSum=0.209;VQSLOD=5.9028;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:14:20.94:0,21,140	0/0:5,0:5:11.92:0,12,88	0/0:22,0:19:0.35:0,0,103	0/0:13,0:10:11.77:0,12,81	0/1:6,15:21:4.33:273,0,4	1/1:3,23:28:11.60:499,12,0	0/1:5,13:18:36.55:329,0,37	0/0:3,0:20:3.79:0,4,48	1/1:3,14:17:14.22:299,14,0	1/1:4,19:24:37.94:492,38,0	1/1:5,12:17:19.18:207,19,0	1/1:4,12:16:20.15:353,20,0	0/0:15,0:17:34.79:0,35,246	1/1:3,13:16:33.05:321,33,0	1/1:2,19:22:47.24:490,47,0	1/1:3,13:17:32.86:306,33,0	1/1:2,11:13:33.05:321,33,0	1/1:5,7:12:6.31:215,6,0	1/1:8,12:21:25.92:374,26,0	1/1:11,19:30:31.99:436,32,0	1/1:11,6:17:18.03:175,18,0	0/1:11,0:11:8.32:8,0,110	0/0:19,0:20:46.54:0,47,322	0/0:11,0:11:14.88:0,15,109	0/1:1,3:4:12.86:49,0,13	1/1:6,14:21:13.92:260,14,0	0/1:5,14:21:21.61:315,0,22	0/1:6,6:13:10.49:205,0,10
chr10	66531873	.	C	CG	7473.20	PASS	AB=0.973;AC=43;AF=0.768;AN=56;BaseQRankSum=-0.414;DP=390;FS=1.989;HRun=3;HaplotypeScore=51.8904;InbreedingCoeff=0.8471;MQ=69.81;MQ0=6;MQRankSum=0.505;QD=25.95;ReadPosRankSum=5.534;VQSLOD=3.8850;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,30:33:41.20:967,41,0	1/1:0,5:5:12.04:168,12,0	0/0:43,0:23:30.58:0,31,355	0/1:35,0:14:11.34:11,0,222	1/1:0,14:14:35.85:406,36,0	1/1:0,11:11:30.10:419,30,0	1/1:1,7:8:18.06:251,18,0	0/0:13,0:13:33.09:0,33,378	1/1:2,7:9:15.05:210,15,0	1/1:2,15:17:45.06:569,45,0	1/1:1,8:9:27.09:372,27,0	1/1:2,9:11:15.05:210,15,0	0/0:9,0:9:27.08:0,27,314	1/1:0,11:11:27.09:378,27,0	1/1:0,5:5:6.02:84,6,0	1/1:0,5:5:6.02:83,6,0	1/1:2,18:20:33.96:536,34,0	1/1:3,7:10:24.08:335,24,0	1/1:3,11:13:25.78:352,26,0	1/1:0,22:22:56.85:671,57,0	1/1:0,10:10:12.04:168,12,0	0/0:11,0:11:24.07:0,24,285	0/0:17,0:16:42.09:0,42,466	0/0:8,0:8:24.03:0,24,252	1/1:0,12:12:30.10:420,30,0	1/1:0,7:7:18.05:235,18,0	1/1:0,12:12:27.09:377,27,0	1/1:0,7:7:18.06:251,18,0
chr10	66532730	.	CTG	C	11634.80	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=5.804;DP=369;FS=5.112;HRun=0;HaplotypeScore=88.0693;InbreedingCoeff=0.9835;MQ=59.23;MQ0=0;MQRankSum=-6.597;QD=41.85;ReadPosRankSum=3.517;VQSLOD=6.9117;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,15:15:45.15:688,45,0	1/1:0,5:5:15.05:229,15,0	0/0:9,0:9:24.08:0,24,452	0/0:5,0:5:15.05:0,15,271	1/1:1,13:14:36.12:550,36,0	1/1:1,15:16:45.15:688,45,0	1/1:0,13:13:39.13:596,39,0	0/0:30,0:30:90.29:0,90,1672	1/1:0,12:12:36.12:550,36,0	1/1:2,16:18:51.15:739,51,0	1/1:2,20:22:54.18:825,54,0	1/1:2,10:12:27.09:413,27,0	0/0:11,0:11:30.10:0,30,578	1/1:0,13:13:39.13:595,39,0	1/1:0,12:12:36.12:550,36,0	1/1:0,9:9:27.09:413,27,0	1/1:1,7:8:21.07:320,21,0	1/1:2,10:12:27.09:413,27,0	1/1:1,5:6:15.04:210,15,0	1/1:0,17:17:51.17:780,51,0	1/1:0,12:12:33.11:505,33,0	0/0:20,0:20:54.19:0,54,1041	0/0:11,0:11:33.11:0,33,636	0/0:5,0:5:12.04:0,12,231	1/1:1,10:11:27.09:413,27,0	1/1:0,16:16:42.14:642,42,0	1/1:1,24:25:69.23:1055,69,0	1/1:0,10:10:30.10:459,30,0
chr10	66533164	.	C	CT	1161.23	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-5.719;DP=525;FS=5.796;HRun=3;HaplotypeScore=52.4318;InbreedingCoeff=0.9873;MQ=87.75;MQ0=0;MQRankSum=-4.920;QD=36.29;ReadPosRankSum=0.561;VQSLOD=4.0642;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,27:27:78.26:1092,78,0	1/1:0,5:5:15.01:188,15,0	0/0:22,0:22:63.11:0,63,713	0/0:24,0:24:68.06:0,68,734	0/0:18,0:18:45.14:0,45,539	0/0:26,0:26:66.20:0,66,791	0/0:15,0:15:42.13:0,42,504	0/0:23,0:23:57.16:0,57,674	0/0:16,0:16:45.12:0,45,529	0/0:28,0:28:78.23:0,78,925	0/0:16,0:16:45.14:0,45,539	0/0:20,0:20:57.16:0,57,672	0/0:17,0:17:51.13:0,51,597	0/0:16,0:16:45.12:0,45,524	0/0:23,0:23:66.20:0,66,791	0/0:16,0:16:45.14:0,45,540	0/0:15,0:15:45.14:0,45,540	0/0:23,0:23:63.18:0,63,744	0/0:25,0:25:69.21:0,69,827	0/0:23,0:23:63.19:0,63,750	0/0:19,0:19:57.15:0,57,660	0/0:7,0:7:21.06:0,21,252	0/0:17,0:17:48.15:0,48,576	0/0:13,0:13:39.12:0,39,467	0/0:14,0:14:33.09:0,33,384	0/0:26,0:26:78.22:0,78,917	0/0:24,0:24:66.18:0,66,769	0/0:7,0:7:21.06:0,21,252
chr10	66533500	.	TGCGCGCGCGCGCGC	T	3839.55	PASS	AB=0.864;AC=30;AF=0.789;AN=38;BaseQRankSum=0.581;DP=345;FS=1.650;HRun=0;HaplotypeScore=129.7546;InbreedingCoeff=0.3187;MQ=32.47;MQ0=36;MQRankSum=-1.590;QD=17.53;ReadPosRankSum=0.581;VQSLOD=2.6445;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:10,0:12:0:0,0,0	./.	./.	./.	./.	1/1:13,4:15:0.45:2,0,0	1/1:9,10:18:15.05:581,15,0	1/1:3,0:7:12.03:305,12,0	1/1:12,7:16:3.01:116,3,0	1/1:10,3:14:0.77:517,1,0	./.	1/1:15,2:18:9.50:351,10,0	1/1:8,0:13:9.03:203,9,0	./.	1/1:5,4:9:3.01:118,3,0	1/1:2,3:6:3.01:119,3,0	1/1:9,3:10:15.05:553,15,0	0/1:13,0:10:13.78:112,0,14	1/1:13,0:12:9.01:271,9,0	1/1:10,2:11:6.02:235,6,0	./.	0/0:9,0:8:9.03:0,9,524	0/0:12,0:11:0:0,0,0	0/0:16,0:18:3.44:0,3,21	./.	1/1:14,2:11:6.85:239,7,0	1/1:7,3:10:3.01:117,3,0	./.
chr10	66534071	.	T	TGA	1021.81	PASS	AB=0.984;AC=39;AF=0.696;AN=56;BaseQRankSum=-0.778;DP=390;FS=2.843;HRun=0;HaplotypeScore=150.0948;InbreedingCoeff=0.2727;MQ=68.41;MQ0=5;MQRankSum=2.602;QD=3.45;ReadPosRankSum=3.779;VQSLOD=2.0864;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:2.97:0,3,10	0/0:8,0:8:3.78:0,4,16	0/0:19,0:17:9.04:0,9,179	0/1:30,0:16:48.39:53,0,48	1/1:31,0:31:13.94:80,14,0	1/1:12,0:11:2.59:10,3,0	0/0:14,0:14:0.94:0,1,2	0/0:26,0:26:40.61:0,41,231	1/1:13,0:13:5.71:46,6,0	0/1:10,0:10:5.37:89,0,5	1/1:18,0:18:8.75:70,9,0	0/1:10,0:10:11.45:68,0,11	0/1:12,0:12:12.58:25,0,13	0/0:7,0:7:0.89:0,1,2	0/1:11,0:11:0:0,0,0	1/1:12,0:12:8.90:63,9,0	1/1:9,0:9:1.86:18,2,0	1/1:4,0:4:3.95:38,4,0	1/1:16,0:16:13.48:138,13,0	1/1:15,4:19:0.35:49,0,0	1/1:4,0:4:1.25:3,1,0	1/1:13,0:13:4.49:14,4,0	1/1:14,0:14:8.90:43,9,0	1/1:12,0:12:10.41:48,10,0	1/1:9,4:13:5.75:50,6,0	1/1:18,3:21:12.65:242,13,0	1/1:6,0:6:2.70:7,3,0	1/1:2,0:2:2.77:13,3,0
chr10	66534072	.	GATAT	G	4709.23	PASS	AB=0.985;AC=47;AF=0.839;AN=56;BaseQRankSum=-3.521;DP=388;FS=1.892;HRun=0;HaplotypeScore=140.1377;InbreedingCoeff=-0.2681;MQ=68.25;MQ0=7;MQRankSum=-2.941;QD=12.14;ReadPosRankSum=2.550;VQSLOD=4.1483;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:19,0:19:16.91:32,0,17	1/1:8,0:8:2.35:82,2,0	0/1:20,0:17:99:134,0,267	0/1:34,0:16:36.45:56,0,36	1/1:31,0:31:7.46:26,7,0	1/1:12,0:11:3.01:37,3,0	1/1:12,0:12:5.76:60,6,0	1/1:0,25:25:69.24:1438,69,0	1/1:13,0:13:13.62:166,14,0	1/1:11,0:11:5.05:257,5,0	1/1:18,0:18:18.05:216,18,0	0/1:10,0:10:25.22:136,0,25	0/1:11,0:11:5.37:142,0,5	1/1:7,0:7:6.49:72,6,0	1/1:11,0:11:3.01:35,3,0	1/1:12,0:12:11.79:141,12,0	1/1:9,0:9:9.03:107,9,0	1/1:4,0:4:9.03:110,9,0	1/1:14,0:14:35.46:403,35,0	1/1:19,0:19:1.46:165,1,0	1/1:4,0:4:3:27,3,0	0/1:13,0:13:4.59:135,0,5	0/1:14,0:14:4.86:109,0,5	0/1:12,0:12:61.94:74,0,62	1/1:13,0:13:4.56:38,5,0	0/1:20,0:20:63.72:396,0,64	1/1:6,0:6:6.02:73,6,0	1/1:2,0:2:4.83:42,5,0
chr10	66534073	.	ATATT	A	7526.02	PASS	AB=0.913;AC=54;AF=0.964;AN=56;BaseQRankSum=-5.274;DP=379;FS=5.533;HRun=0;HaplotypeScore=127.0228;InbreedingCoeff=-0.1019;MQ=68.74;MQ0=9;MQRankSum=-2.241;QD=19.86;ReadPosRankSum=3.506;VQSLOD=3.8851;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,17:18:3.01:63,3,0	1/1:3,5:8:8.99:146,9,0	0/1:19,4:17:99:252,0,322	0/1:37,1:16:32.42:138,0,32	1/1:26,3:29:15:144,15,0	1/1:5,7:11:3.01:62,3,0	1/1:0,12:12:5.39:96,5,0	1/1:25,0:25:69.23:982,69,0	1/1:5,7:12:18.04:302,18,0	1/1:0,10:10:26.83:454,27,0	1/1:9,9:18:21.53:390,22,0	1/1:7,3:10:4.59:311,5,0	1/1:10,1:11:21.59:345,22,0	1/1:3,4:7:8.98:133,9,0	1/1:0,11:11:3.01:52,3,0	1/1:5,6:11:16.04:258,16,0	1/1:8,1:9:12:188,12,0	1/1:0,4:4:9.03:171,9,0	1/1:0,13:13:39.12:686,39,0	1/1:11,8:19:20.69:338,21,0	1/1:4,0:4:3.01:52,3,0	1/1:8,3:11:19.29:294,19,0	1/1:12,0:12:30.04:373,30,0	1/1:13,0:13:4.52:233,5,0	1/1:6,7:13:6.02:82,6,0	1/1:11,8:19:29.76:783,30,0	1/1:0,4:4:6.02:111,6,0	1/1:1,1:2:6.02:86,6,0
chr10	66534075	.	ATT	A	4757.59	PASS	AB=0.988;AC=54;AF=0.964;AN=56;BaseQRankSum=-3.159;DP=375;FS=4.519;HRun=2;HaplotypeScore=127.4768;InbreedingCoeff=-0.0892;MQ=66.01;MQ0=12;MQRankSum=-3.287;QD=12.69;ReadPosRankSum=2.633;VQSLOD=2.2672;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:18:2.92:17,3,0	1/1:8,0:8:8.84:54,9,0	0/1:22,0:15:99:124,0,228	0/1:40,1:15:42.16:101,0,42	1/1:3,24:27:9.03:147,9,0	1/1:12,0:11:3.01:38,3,0	1/1:12,0:12:5.34:48,5,0	1/1:25,0:25:68.64:515,69,0	1/1:12,0:12:18.04:218,18,0	1/1:10,0:10:24.96:311,25,0	1/1:17,0:17:18.06:220,18,0	1/1:9,0:9:20.33:221,20,0	1/1:8,2:10:21.25:193,21,0	1/1:7,0:7:9.03:106,9,0	1/1:11,0:11:3.01:34,3,0	1/1:11,0:11:14.80:154,15,0	1/1:9,0:9:9.03:108,9,0	1/1:4,0:4:9.03:111,9,0	1/1:13,0:13:36.11:449,36,0	1/1:19,0:19:18.37:211,18,0	1/1:4,0:4:3:27,3,0	1/1:10,1:11:18.90:195,19,0	1/1:10,2:12:22.15:190,22,0	1/1:12,1:13:16.13:210,16,0	1/1:11,2:13:6.02:83,6,0	1/1:19,0:19:42.69:513,43,0	1/1:4,0:4:6.02:75,6,0	1/1:2,0:2:6.02:83,6,0
chr10	66534677	.	G	GT	1195.88	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-9.502;DP=645;FS=1.359;HRun=6;HaplotypeScore=61.8076;InbreedingCoeff=0.9650;MQ=79.33;MQ0=0;MQRankSum=-1.423;QD=29.90;ReadPosRankSum=-4.563;VQSLOD=2.2291;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,102,1024	0/0:4,0:4:12.03:0,12,122	0/0:25,0:24:53.64:0,54,507	0/0:27,0:27:68.43:0,68,659	0/0:24,0:24:60.13:0,60,612	0/0:21,0:21:63.12:0,63,634	0/0:23,0:23:63.12:0,63,636	1/1:5,35:40:99:1291,105,0	0/0:28,0:28:75.16:0,75,764	0/0:27,0:27:71.18:0,71,706	0/0:16,0:16:45.10:0,45,459	0/0:21,0:21:60.13:0,60,612	0/0:17,0:17:42.09:0,42,428	0/0:22,0:22:60.13:0,60,611	0/0:24,0:24:69.16:0,69,704	0/0:13,0:13:30.06:0,30,306	0/0:33,0:33:90.20:0,90,917	0/0:13,0:13:27.41:0,27,301	0/0:23,0:23:60.10:0,60,594	0/0:21,0:21:54.06:0,54,528	0/0:25,0:25:66.13:0,66,665	0/0:21,0:21:57.04:0,57,555	0/0:27,0:27:75.16:0,75,765	0/0:15,0:15:45.10:0,45,458	0/0:29,0:29:83.51:0,84,824	0/0:25,0:25:66.14:0,66,673	0/0:35,0:35:99:0,99,1001	0/0:7,0:7:21.05:0,21,214
chr10	66535124	.	C	CT	2754.32	PASS	AB=0.795;AC=41;AF=0.732;AN=56;BaseQRankSum=0.215;DP=417;FS=0.550;HRun=13;HaplotypeScore=75.9683;InbreedingCoeff=0.4624;MQ=73.55;MQ0=0;MQRankSum=-2.254;QD=8.12;ReadPosRankSum=-0.584;VQSLOD=2.6162;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:13,4:18:23.03:205,23,0	1/1:3,2:4:6.01:56,6,0	0/0:23,0:15:1.85:0,2,37	0/0:14,0:11:20.11:0,20,111	0/1:22,1:22:42.11:54,0,42	1/1:4,9:13:14.87:113,15,0	1/1:4,3:13:20.54:143,21,0	1/1:14,19:34:46.84:427,47,0	1/1:8,3:11:5.69:100,6,0	1/1:8,6:15:20.72:161,21,0	1/1:2,3:5:2.92:18,3,0	0/1:5,10:15:2.61:72,0,3	0/0:13,0:13:29.65:0,30,198	1/1:13,4:17:20.92:177,21,0	1/1:5,6:12:9.47:82,9,0	1/1:2,10:12:17.96:157,18,0	1/1:12,14:26:10.73:198,11,0	1/1:8,3:12:14.74:104,15,0	1/1:7,9:16:29.74:226,30,0	0/1:13,5:18:10.30:123,0,10	1/1:2,2:8:5.84:42,6,0	0/0:10,0:10:17.82:0,18,123	0/1:12,1:13:1.15:1,0,131	0/0:18,0:17:29.41:0,29,199	0/1:7,5:12:17.10:17,0,18	1/1:7,17:24:25.88:268,26,0	1/1:7,4:11:1.95:75,2,0	1/1:1,5:6:12.01:111,12,0
chr10	66535137	.	TA	T	2003.02	PASS	AB=0.833;AC=41;AF=0.732;AN=56;BaseQRankSum=2.026;DP=393;FS=2.249;HRun=4;HaplotypeScore=59.7436;InbreedingCoeff=0.7596;MQ=64.74;MQ0=1;MQRankSum=-0.758;QD=7.10;ReadPosRankSum=-0.389;VQSLOD=-0.2253;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:17:21.54:137,22,0	1/1:3,0:3:8.22:43,8,0	0/0:16,0:8:9.44:0,9,90	0/0:12,0:8:19.96:0,20,153	0/1:16,4:19:2.03:169,0,2	1/1:14,0:14:9.82:63,10,0	1/1:12,0:11:10.88:52,11,0	0/0:32,0:32:82.32:0,82,637	1/1:12,0:12:20.22:121,20,0	1/1:10,0:10:22.73:129,23,0	1/1:6,0:6:5.63:52,6,0	1/1:13,0:13:1.88:27,2,0	0/0:13,0:13:33.04:0,33,383	1/1:15,0:15:10.63:77,11,0	1/1:8,0:8:4.63:23,5,0	1/1:12,0:12:15.05:83,15,0	1/1:31,0:31:30.76:219,31,0	1/1:16,0:16:26.95:181,27,0	1/1:16,0:16:16.84:112,17,0	1/1:14,0:14:7.39:85,7,0	1/1:8,0:8:11.48:72,11,0	0/0:6,0:6:18.06:0,18,224	0/0:15,0:15:39:0,39,404	0/0:17,0:16:47.82:0,48,511	1/1:11,0:11:8.04:68,8,0	1/1:26,0:26:41.59:300,42,0	1/1:9,0:9:2.37:68,2,0	1/1:9,0:9:17.22:113,17,0
chr10	66535550	.	TC	T	117.70	PASS	AB=0.889;AC=15;AF=0.577;AN=26;BaseQRankSum=0.000;DP=132;FS=6.410;HRun=1;HaplotypeScore=12.4210;InbreedingCoeff=0.3478;MQ=31.02;MQ0=40;MQRankSum=-3.592;QD=3.57;ReadPosRankSum=-1.333;VQSLOD=-0.4709;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:7,1:4:14.01:14,0,23	./.	./.	./.	./.	./.	1/1:7,0:2:2.94:18,3,0	0/0:2,0:1:3.01:0,3,33	1/1:2,0:1:2.97:20,3,0	1/1:2,1:2:4.26:40,4,0	./.	./.	0/0:5,0:2:3.01:0,3,33	1/1:0,1:1:2.92:17,3,0	./.	./.	1/1:2,1:1:2.98:21,3,0	1/1:3,2:2:6.02:73,6,0	./.	./.	./.	0/0:12,0:4:4.15:0,4,19	0/0:18,0:9:8.82:0,9,87	0/0:15,0:11:11.61:0,12,89	./.	./.	1/1:3,1:3:2.98:22,3,0	./.
chr10	66535666	.	TTC	T	114.42	PASS	AB=0.917;AC=18;AF=0.500;AN=36;BaseQRankSum=-1.692;DP=128;FS=3.132;HRun=0;HaplotypeScore=13.3680;InbreedingCoeff=0.4184;MQ=31.87;MQ0=38;MQRankSum=-2.769;QD=3.95;ReadPosRankSum=-1.538;VQSLOD=1.0672;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	0/0:21,0:3:5.59:0,6,26	1/1:2,0:1:1.25:3,1,0	./.	./.	0/0:4,0:2:5.94:0,6,42	0/0:4,0:3:4.63:0,5,20	0/1:4,1:2:0:0,0,0	./.	1/1:2,0:2:3.07:11,3,0	0/0:11,0:5:3.01:0,3,33	0/1:1,0:1:0:0,0,0	1/1:2,2:3:2.92:18,3,0	1/1:3,0:2:5.93:51,6,0	1/1:2,2:3:2.04:6,2,0	0/0:2,0:2:2.21:0,2,40	1/1:2,0:1:2.90:16,3,0	./.	0/0:2,0:1:0:0,0,0	./.	0/0:12,0:10:5.86:0,6,84	0/0:13,0:11:4.69:0,5,122	./.	1/1:2,0:1:3.01:41,3,0	1/1:2,2:2:6.02:81,6,0	./.
chr10	66536291	.	C	CA	2054.75	PASS	AB=0.684;AC=27;AF=0.482;AN=56;BaseQRankSum=-1.713;DP=407;FS=3.989;HRun=15;HaplotypeScore=61.2932;InbreedingCoeff=-0.0132;MQ=56.40;MQ0=29;MQRankSum=0.617;QD=7.36;ReadPosRankSum=-0.857;VQSLOD=2.4745;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:24:40.65:0,41,221	0/0:6,0:8:15.77:0,16,83	0/0:28,1:8:2.87:0,3,31	0/0:22,0:7:2.89:0,3,26	0/1:7,3:10:14.64:93,0,15	1/1:6,10:14:11.15:120,11,0	0/0:5,0:6:7.85:0,8,42	0/1:24,2:24:15.17:15,0,144	1/1:7,4:11:2.96:130,3,0	0/1:5,9:15:7.05:167,0,7	0/1:7,9:19:16.41:110,0,16	1/1:4,3:7:5.99:50,6,0	0/1:8,1:10:5.85:6,0,74	1/1:4,2:8:14.90:114,15,0	0/1:7,8:15:21.26:60,0,21	0/1:5,5:10:2.98:86,0,3	0/1:11,9:20:27.08:113,0,27	0/1:6,6:12:14.16:106,0,14	1/1:12,6:19:0.05:194,0,0	1/1:1,10:13:32.70:247,33,0	1/1:3,3:5:3:25,3,0	0/0:11,0:11:20.46:0,20,125	0/0:18,0:17:12.22:0,12,159	0/0:9,0:9:7.65:0,8,41	0/1:5,9:15:24.16:137,0,24	0/1:7,16:22:3.10:302,0,3	0/1:4,9:13:6.86:84,0,7	0/1:2,5:7:21:61,0,21
chr10	66539251	.	T	TG	1007.88	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-6.288;DP=683;FS=1.669;HRun=0;HaplotypeScore=61.9924;InbreedingCoeff=0.9980;MQ=85.21;MQ0=0;MQRankSum=-2.677;QD=41.99;ReadPosRankSum=2.443;VQSLOD=4.3920;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:93.28:0,93,1265	0/0:10,0:10:30.10:0,30,420	0/0:21,0:21:54.74:0,55,810	0/0:24,0:24:69.15:0,69,917	0/0:37,0:37:99:0,108,1477	0/0:40,0:40:99:0,114,1577	0/0:13,0:13:36.12:0,36,504	0/0:37,0:37:99:0,111,1537	0/0:24,0:24:72.22:0,72,988	0/0:30,0:31:93.26:0,93,1254	0/0:32,0:32:96.32:0,96,1342	0/0:18,0:18:54.17:0,54,739	0/0:17,0:17:51.15:0,51,680	1/1:0,24:24:69.24:1103,69,0	0/0:36,0:36:99:0,108,1494	0/0:11,0:11:33.11:0,33,461	0/0:23,0:23:69.20:0,69,945	0/0:14,0:14:42.14:0,42,587	0/0:19,0:19:57.19:0,57,797	0/0:29,0:29:87.28:0,87,1200	0/0:23,0:23:66.21:0,66,907	0/0:21,0:21:63.21:0,63,881	0/0:33,0:33:99:0,99,1349	0/0:9,0:9:27.09:0,27,378	0/0:29,0:29:84.28:0,84,1175	0/0:26,0:26:72.24:0,72,1007	0/0:36,0:36:99:0,105,1450	0/0:15,0:15:45.15:0,45,629
chr10	66539853	.	ATAT	A	1238.67	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.457;DP=562;FS=25.254;HRun=0;HaplotypeScore=118.3922;InbreedingCoeff=0.9954;MQ=71.03;MQ0=1;MQRankSum=-6.591;QD=49.55;ReadPosRankSum=-3.583;VQSLOD=2.2792;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:78.21:0,78,1738	0/0:7,0:7:21.06:0,21,462	0/0:23,0:23:66.18:0,66,1448	0/0:14,0:14:39.13:0,39,908	0/0:30,0:30:90.31:0,90,2166	0/0:20,0:20:60.19:0,60,1404	0/0:13,0:13:39.13:0,39,924	1/1:0,25:25:75.22:1334,75,0	0/0:21,0:21:63.22:0,63,1488	0/0:32,0:32:93.31:0,93,2188	0/0:19,0:19:57.18:0,57,1294	0/0:14,0:14:42.14:0,42,994	0/0:13,0:13:39.13:0,39,924	0/0:19,0:19:57.16:0,57,1232	0/0:23,0:23:69.22:0,69,1604	0/0:14,0:14:42.14:0,42,997	0/0:16,0:16:48.16:0,48,1142	0/0:15,0:15:45.15:0,45,1094	0/0:23,0:23:69.22:0,69,1558	0/0:29,0:29:84.27:0,84,1973	0/0:21,0:21:63.20:0,63,1425	0/0:13,0:13:39.11:0,39,852	0/0:16,0:16:48.16:0,48,1143	0/0:17,0:17:48.12:0,48,1048	0/0:21,0:21:63.22:0,63,1456	0/0:23,0:23:69.24:0,69,1665	0/0:43,0:42:99:0,117,2588	0/0:11,0:11:33.11:0,33,801
chr10	66540031	.	C	CA	10580.86	PASS	AB=0.875;AC=52;AF=0.963;AN=54;BaseQRankSum=3.779;DP=426;FS=4.751;HRun=1;HaplotypeScore=217.8264;InbreedingCoeff=0.1120;MQ=41.86;MQ0=0;MQRankSum=-5.227;QD=24.90;ReadPosRankSum=4.338;VQSLOD=4.6482;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,7:9:21.04:222,21,0	1/1:0,4:4:12.01:109,12,0	0/1:6,3:9:58.38:116,0,58	0/1:8,0:8:6.89:7,0,46	1/1:2,19:21:38.81:368,39,0	1/1:3,23:26:75.09:717,75,0	1/1:1,9:10:27.03:246,27,0	1/1:3,24:27:78.21:887,78,0	1/1:1,10:11:30.04:295,30,0	1/1:1,14:15:42:444,42,0	1/1:1,25:25:62.13:527,62,0	1/1:0,13:13:36.01:325,36,0	1/1:1,26:27:78.09:740,78,0	1/1:1,13:15:32.06:297,32,0	1/1:1,11:12:32.96:312,33,0	1/1:3,12:15:39.07:426,39,0	1/1:0,10:10:27.04:266,27,0	./.	1/1:0,11:12:35.99:397,36,0	1/1:4,26:30:81.03:791,81,0	1/1:4,9:13:18.03:171,18,0	1/1:0,8:8:24.01:212,24,0	1/1:2,8:10:20.98:174,21,0	1/1:1,13:14:26.82:229,27,0	1/1:2,13:15:39.05:396,39,0	1/1:2,21:23:63.16:703,63,0	1/1:2,28:30:87.06:873,87,0	1/1:1,11:12:29.95:329,30,0
chr10	66540034	.	AG	A	8246.90	PASS	AB=0.798;AC=52;AF=0.963;AN=54;BaseQRankSum=2.784;DP=450;FS=3.020;HRun=2;HaplotypeScore=230.5874;InbreedingCoeff=-0.0394;MQ=41.81;MQ0=0;MQRankSum=-4.649;QD=18.37;ReadPosRankSum=2.304;VQSLOD=4.7150;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,7:9:20.80:158,21,0	1/1:2,4:6:17.82:150,18,0	0/1:6,3:9:58.84:91,0,59	0/1:9,2:11:47.07:93,0,47	1/1:2,19:21:37.78:250,38,0	1/1:2,24:26:74.10:517,74,0	1/1:2,9:11:29.57:204,30,0	1/1:1,26:27:74.98:678,75,0	1/1:6,9:15:41.63:358,42,0	1/1:1,15:16:47.04:395,47,0	1/1:2,24:25:56.85:337,57,0	1/1:1,13:14:38.25:256,38,0	1/1:3,25:28:79.82:532,80,0	1/1:4,12:16:34.32:245,34,0	1/1:2,10:12:31.95:214,32,0	1/1:3,12:15:38.63:309,39,0	1/1:0,10:10:26.67:185,27,0	./.	1/1:2,12:14:41.75:371,42,0	1/1:6,24:30:79.32:546,79,0	1/1:6,8:14:20.75:137,21,0	1/1:0,8:8:23.50:141,23,0	1/1:1,9:10:23.32:150,23,0	1/1:3,12:15:26.20:149,26,0	1/1:4,12:16:41.44:301,41,0	1/1:2,21:23:62.81:515,63,0	1/1:4,27:31:85.51:598,86,0	1/1:7,9:16:37.91:366,38,0
chr10	66541069	.	A	AT	5829.24	PASS	AB=0.637;AC=42;AF=0.750;AN=56;BaseQRankSum=-4.494;DP=429;FS=9.032;HRun=12;HaplotypeScore=50.8387;InbreedingCoeff=0.7683;MQ=69.09;MQ0=0;MQRankSum=-2.935;QD=15.42;ReadPosRankSum=-0.195;VQSLOD=5.0741;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,9:11:12.02:117,12,0	1/1:0,5:5:12.02:117,12,0	0/0:16,1:18:12.33:0,12,124	0/0:5,0:5:11.67:0,12,73	1/1:4,24:29:41.04:531,41,0	1/1:3,16:20:31.13:280,31,0	1/1:2,4:7:17.70:145,18,0	1/1:18,0:30:32.45:180,32,0	1/1:2,17:19:14.15:300,14,0	1/1:5,20:25:25.96:381,26,0	1/1:3,12:16:35.85:325,36,0	1/1:1,13:14:27.04:259,27,0	0/0:12,0:12:23.78:0,24,173	1/1:0,9:10:17.82:150,18,0	1/1:2,11:13:23.96:221,24,0	1/1:1,11:12:27.04:263,27,0	0/1:6,3:10:6.88:101,0,7	1/1:5,5:10:12.02:117,12,0	1/1:7,11:19:35.84:317,36,0	1/1:5,15:23:30.37:392,30,0	0/1:4,15:19:29.67:227,0,30	0/0:3,0:3:8.95:0,9,66	0/0:7,0:7:11.87:0,12,87	0/0:6,0:6:17.90:0,18,131	1/1:2,14:18:26.72:233,27,0	1/1:8,23:32:43.99:562,44,0	1/1:3,19:23:38.90:365,39,0	1/1:2,10:13:26.88:248,27,0
chr10	66541948	.	T	TA	678.86	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=0.937;DP=482;FS=1.300;HRun=11;HaplotypeScore=55.7702;InbreedingCoeff=0.7600;MQ=58.81;MQ0=3;MQRankSum=-1.762;QD=11.51;ReadPosRankSum=-2.428;VQSLOD=2.4881;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:65.71:0,66,507	0/0:4,0:5:13.98:0,14,96	0/0:10,0:7:8.11:0,8,83	0/0:3,0:2:2.99:0,3,23	1/1:6,22:29:62.86:599,63,0	0/0:16,0:16:38.80:0,39,294	0/0:6,0:6:8.96:0,9,70	1/1:16,0:30:33.73:201,34,0	0/0:21,0:20:56.77:0,57,439	0/0:28,1:29:38.25:0,38,480	0/0:22,0:24:55.75:0,56,424	0/0:14,0:14:41.84:0,42,325	0/0:11,0:11:29.88:0,30,232	0/0:17,0:17:38.83:0,39,302	0/0:11,0:11:23.90:0,24,186	0/0:13,0:13:32.83:0,33,251	0/0:27,0:28:53.89:0,54,414	0/0:29,0:29:32.23:0,32,298	0/0:21,1:22:14.35:0,14,294	0/0:22,0:23:58.79:0,59,443	0/0:1,0:1:2.99:0,3,23	0/0:3,0:3:8.96:0,9,68	0/0:7,0:8:19.96:0,20,144	0/0:9,0:11:30.95:0,31,217	0/0:17,0:17:43.63:0,44,330	0/0:21,0:22:40.83:0,41,308	0/0:32,0:32:85.65:0,86,647	0/0:20,0:19:35.78:0,36,279
chr10	66543516	.	C	CCATGGCCTCC	8124.03	PASS	AB=0.929;AC=42;AF=0.808;AN=52;BaseQRankSum=-5.472;DP=146;FS=0.000;HRun=0;HaplotypeScore=187.1746;InbreedingCoeff=-0.1214;MQ=70.29;MQ0=0;MQRankSum=-1.007;QD=56.81;ReadPosRankSum=-1.329;VQSLOD=4.0787;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,0:8:12.03:414,12,0	1/1:4,0:4:6.02:232,6,0	0/1:3,0:5:22.26:535,0,22	0/1:3,1:5:9.43:488,0,9	1/1:7,0:7:6.02:256,6,0	0/1:7,0:7:0.38:393,0,0	1/1:3,0:3:8.62:281,9,0	1/1:8,0:8:19.25:327,19,0	0/1:7,0:7:28.11:240,0,28	1/1:6,0:6:3.69:277,4,0	1/1:4,0:4:3.01:129,3,0	1/1:6,0:6:1.52:340,2,0	1/1:5,0:5:2.76:207,3,0	1/1:10,0:10:13.13:896,13,0	0/1:9,0:9:5.54:184,0,6	1/1:10,0:10:13.93:770,14,0	1/1:3,0:3:9.03:351,9,0	1/1:2,0:2:4.26:130,4,0	1/1:1,0:1:3.01:120,3,0	0/1:8,0:8:2.20:208,0,2	./.	./.	1/1:1,0:1:2.96:19,3,0	0/0:2,0:2:2.37:0,2,8	0/1:6,0:6:1.09:367,0,1	1/1:8,0:8:18.53:698,19,0	0/1:7,0:7:1.37:150,0,1	1/1:3,0:3:8.87:112,9,0
chr10	66543661	.	GT	G	9433.81	PASS	AB=0.935;AC=52;AF=0.963;AN=54;BaseQRankSum=-0.098;DP=602;FS=0.000;HRun=3;HaplotypeScore=126.3549;InbreedingCoeff=-0.0445;MQ=77.14;MQ0=1;MQRankSum=-2.436;QD=15.67;ReadPosRankSum=5.796;VQSLOD=4.2899;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:48,0:48:99:690,103,0	1/1:7,0:7:17.67:114,18,0	0/1:17,3:20:27.08:177,0,27	0/1:23,0:23:40.97:155,0,41	1/1:38,1:39:85.77:597,86,0	1/1:18,0:18:50.60:376,51,0	1/1:25,0:25:67.62:427,68,0	1/1:39,0:38:89.04:541,89,0	1/1:22,0:22:62.25:441,62,0	1/1:11,0:11:31.49:166,31,0	1/1:14,0:14:29.92:236,30,0	1/1:19,0:19:50.20:337,50,0	1/1:25,0:25:62.13:425,62,0	1/1:26,0:26:59.24:411,59,0	1/1:17,0:17:50.45:360,50,0	1/1:24,0:24:62.08:424,62,0	1/1:19,0:18:50.26:338,50,0	1/1:8,0:8:23.52:145,24,0	1/1:32,0:32:86.97:513,87,0	1/1:11,0:11:23.91:183,24,0	1/1:44,0:43:99:669,110,0	1/1:19,0:19:50.04:318,50,0	1/1:18,0:18:35.47:238,35,0	1/1:24,0:24:41.85:354,42,0	1/1:9,0:9:23.90:181,24,0	1/1:21,0:21:4.31:212,4,0	1/1:20,0:20:56.46:406,56,0	./.
chr10	66544335	.	T	TA	1605.50	PASS	AB=0.736;AC=19;AF=0.339;AN=56;BaseQRankSum=-6.547;DP=533;FS=3.044;HRun=16;HaplotypeScore=71.5557;InbreedingCoeff=-0.3365;MQ=75.02;MQ0=3;MQRankSum=-0.240;QD=4.30;ReadPosRankSum=-1.588;VQSLOD=1.0043;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:17.27:0,17,99	0/0:9,0:11:23.11:0,23,115	0/0:24,0:12:0.91:0,1,16	0/0:20,0:15:0.28:0,0,17	0/1:33,3:38:7.22:7,0,151	0/1:10,10:20:27.70:75,0,28	0/1:7,8:15:32.44:44,0,32	0/0:25,1:29:7.75:0,8,122	0/0:13,0:13:11.47:0,11,67	0/1:13,10:25:22.33:196,0,22	0/1:10,3:19:73.20:73,0,83	0/1:5,9:15:8.47:58,0,8	0/1:17,2:21:21.24:21,0,70	0/1:7,12:19:12.54:99,0,13	1/1:7,13:21:7.67:172,8,0	0/1:8,12:20:15.29:78,0,15	0/1:8,2:12:23.07:69,0,23	0/1:15,8:25:23.30:164,0,23	0/1:11,7:20:17.79:112,0,18	0/1:14,12:29:1.70:165,0,2	0/0:5,0:5:1.88:0,2,5	0/0:12,0:15:20.37:0,20,100	0/0:16,0:18:17.80:0,18,94	0/0:10,0:12:18.50:0,19,94	0/1:9,2:12:15.72:91,0,16	0/1:16,7:23:50.07:111,0,50	0/1:14,6:21:25.91:81,0,26	0/1:9,6:18:7.18:140,0,7
chr10	66544762	.	A	AT	4798.90	PASS	AB=0.634;AC=36;AF=0.643;AN=56;BaseQRankSum=-9.420;DP=522;FS=4.637;HRun=13;HaplotypeScore=54.7082;InbreedingCoeff=0.5139;MQ=73.19;MQ0=1;MQRankSum=-1.231;QD=13.40;ReadPosRankSum=1.500;VQSLOD=5.3190;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,10:10:21.02:195,21,0	1/1:0,3:3:6.01:56,6,0	0/0:13,0:8:3.39:0,3,21	0/0:21,0:16:6.46:0,6,84	0/0:26,3:30:7.84:0,8,324	1/1:1,17:18:27.03:251,27,0	0/1:7,10:17:33.68:140,0,34	0/0:17,0:45:54.82:0,55,172	1/1:7,16:23:18.46:314,18,0	1/1:7,13:21:32.14:312,32,0	1/1:5,10:16:28.07:231,28,0	1/1:7,6:14:17.47:170,17,0	0/0:16,0:16:20.37:0,20,143	1/1:3,11:14:18.02:167,18,0	1/1:8,15:23:21.46:342,21,0	1/1:3,9:12:24.03:223,24,0	1/1:3,13:17:0.72:280,1,0	1/1:3,3:12:23.38:169,23,0	0/1:10,14:26:31.46:278,0,31	0/1:12,9:24:6.17:320,0,6	1/1:4,12:16:9.45:230,9,0	0/0:14,0:15:28.78:0,29,191	0/0:11,1:13:0.98:0,1,142	0/0:9,0:10:25.81:0,26,170	0/1:8,13:23:8.36:195,0,8	1/1:10,22:31:63.05:578,63,0	1/1:6,19:24:0.88:292,1,0	1/1:8,4:12:6.01:56,6,0
chr10	66545385	.	T	TA	1218.58	PASS	AB=0.843;AC=41;AF=0.854;AN=48;BaseQRankSum=-3.681;DP=120;FS=14.906;HRun=8;HaplotypeScore=31.6919;InbreedingCoeff=0.1177;MQ=107.78;MQ0=1;MQRankSum=-3.123;QD=12.19;ReadPosRankSum=0.330;VQSLOD=0.8869;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,0:2:3.87:24,4,0	1/1:0,1:1:3.01:35,3,0	0/0:15,0:13:3.27:0,3,109	0/1:12,0:10:21.09:21,0,21	1/1:2,0:2:5.88:48,6,0	1/1:0,3:3:5.96:50,6,0	1/1:1,2:3:5.91:51,6,0	1/1:7,0:7:9.92:81,10,0	1/1:0,2:2:5.93:52,6,0	1/1:3,0:3:3.01:33,3,0	1/1:2,1:3:3.01:31,3,0	1/1:3,0:3:3.48:35,3,0	1/1:2,0:2:3.01:33,3,0	0/0:2,0:2:2.10:0,2,7	1/1:2,1:3:4.96:24,5,0	./.	1/1:5,4:9:15.58:116,16,0	1/1:1,2:3:5.97:46,6,0	1/1:3,7:10:18.50:162,19,0	1/1:1,2:3:6.02:66,6,0	./.	./.	1/1:2,1:3:2.96:19,3,0	./.	0/1:2,4:6:18.38:53,0,18	1/1:3,11:14:30.93:315,31,0	0/1:2,0:2:0:0,0,0	1/1:3,0:3:3.01:34,3,0
chr10	66545395	.	GA	G	875.38	PASS	AB=0.889;AC=41;AF=0.891;AN=46;BaseQRankSum=-3.272;DP=85;FS=1.152;HRun=2;HaplotypeScore=22.7124;InbreedingCoeff=0.0015;MQ=111.01;MQ0=1;MQRankSum=-2.140;QD=10.81;ReadPosRankSum=-1.140;VQSLOD=1.1772;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,0:2:5.02:28,5,0	./.	0/1:14,0:12:8.14:8,0,129	0/1:9,0:6:11.35:11,0,33	1/1:2,0:2:2.90:17,3,0	1/1:2,1:3:5.90:38,6,0	1/1:1,1:2:5.94:42,6,0	1/1:2,2:4:2.89:53,3,0	1/1:1,1:2:0.37:20,0,0	1/1:1,0:1:2.96:19,3,0	1/1:0,1:1:2.90:16,3,0	./.	1/1:2,0:2:2.90:16,3,0	0/0:1,1:2:2.04:0,2,6	1/1:0,2:2:5.96:55,6,0	0/1:1,1:2:5.90:6,0,7	1/1:3,4:7:11.26:83,11,0	1/1:0,2:2:5.99:51,6,0	1/1:1,7:8:17.06:178,17,0	1/1:1,1:2:2.92:17,3,0	./.	./.	1/1:0,1:1:2.96:19,3,0	./.	1/1:3,1:4:5.70:31,6,0	1/1:6,3:9:25.50:238,26,0	1/1:1,0:1:2.74:12,3,0	1/1:1,0:1:2.98:22,3,0
chr10	66547335	.	GTC	G	639.17	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.679;DP=669;FS=0.938;HRun=0;HaplotypeScore=75.1319;InbreedingCoeff=0.9775;MQ=59.76;MQ0=1;MQRankSum=-3.284;QD=35.51;ReadPosRankSum=0.136;VQSLOD=5.3797;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,123,2375	0/0:8,0:8:24.07:0,24,422	0/0:14,0:8:15.05:0,15,264	0/0:18,0:8:21.04:0,21,368	1/1:0,18:18:48.16:734,48,0	0/0:24,0:24:72.25:0,72,1378	0/0:23,0:22:60.21:0,60,1146	0/0:41,0:41:99:0,120,2296	0/0:34,0:34:93.32:0,93,1775	0/0:25,0:25:75.24:0,75,1390	0/0:21,0:21:60.21:0,60,1143	0/0:18,0:18:54.19:0,54,1043	0/0:22,0:22:66.23:0,66,1253	0/0:22,0:22:63.22:0,63,1217	0/0:46,0:46:99:0,138,2591	0/0:23,0:23:69.22:0,69,1280	0/0:36,0:36:99:0,102,1922	0/0:18,0:18:54.19:0,54,1040	0/0:19,0:16:48.16:0,48,885	0/0:15,0:15:45.15:0,45,868	0/0:22,0:22:66.23:0,66,1275	0/0:16,0:16:45.15:0,45,868	0/0:15,0:15:39.13:0,39,753	0/0:35,0:35:99:0,105,2012	0/0:23,0:23:66.23:0,66,1268	0/0:25,0:25:75.26:0,75,1449	0/0:37,0:37:99:0,111,2109	0/0:9,0:9:26.76:0,27,474
chr10	66547901	.	C	CT	9232.75	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=0.025;DP=582;FS=0.403;HRun=8;HaplotypeScore=89.3519;InbreedingCoeff=0.9928;MQ=60.16;MQ0=7;MQRankSum=1.995;QD=23.98;ReadPosRankSum=4.391;VQSLOD=5.1610;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:47.97:0,48,433	0/0:9,0:9:24.01:0,24,220	0/0:25,0:13:31.29:0,31,274	0/0:33,0:18:14.64:0,15,141	1/1:13,14:24:42.08:468,42,0	1/1:2,12:15:32.93:361,33,0	1/1:1,16:17:39.12:450,39,0	0/0:30,0:29:66.01:0,66,599	1/1:4,17:21:33.10:381,33,0	1/1:2,18:19:51.15:588,51,0	1/1:4,26:29:66.20:762,66,0	1/1:7,15:22:45.11:517,45,0	0/0:25,0:25:60.01:0,60,549	1/1:5,9:14:24.07:277,24,0	1/1:2,24:26:54.16:623,54,0	1/1:3,12:15:24.07:277,24,0	1/1:2,19:21:39.12:450,39,0	1/1:1,16:18:41.96:464,42,0	1/1:4,13:17:39.11:449,39,0	1/1:4,18:22:48.14:554,48,0	1/1:1,11:12:24.07:277,24,0	0/0:9,0:9:24.01:0,24,219	0/0:19,0:19:50.49:0,50,466	0/0:12,0:12:26.97:0,27,236	1/1:2,22:24:66.15:747,66,0	1/1:6,22:26:63.17:715,63,0	1/1:4,26:30:38.73:700,39,0	1/1:0,6:6:15.04:173,15,0
chr10	66547926	.	C	CT	694.44	PASS	AB=0.923;AC=9;AF=0.161;AN=56;BaseQRankSum=0.636;DP=581;FS=0.629;HRun=11;HaplotypeScore=95.1758;InbreedingCoeff=0.7060;MQ=58.07;MQ0=21;MQRankSum=-3.042;QD=6.94;ReadPosRankSum=-0.800;VQSLOD=2.2176;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,26:32:18.68:356,19,0	1/1:3,4:7:11.96:109,12,0	0/0:40,0:11:13.49:0,13,91	0/0:35,1:17:22.97:0,23,144	1/1:14,17:26:18.58:323,19,0	0/0:13,0:14:25.91:0,26,188	0/0:16,0:14:20.91:0,21,162	0/0:28,0:26:46.82:0,47,351	0/0:15,1:16:15.31:0,15,156	0/0:19,2:18:5.82:0,6,210	0/0:30,1:31:25.75:0,26,351	0/0:23,0:23:36:0,36,258	0/0:20,0:20:29.82:0,30,232	0/0:14,0:14:14.93:0,15,116	0/0:26,0:26:47.58:0,48,365	0/0:13,0:13:23.90:0,24,184	0/0:21,1:20:10.44:0,10,254	0/0:20,0:19:47.78:0,48,367	0/0:17,1:9:11.89:0,12,89	0/0:18,0:18:44.81:0,45,346	0/0:17,0:16:21.45:0,21,149	0/0:8,0:8:20.92:0,21,163	0/0:11,0:11:17.90:0,18,139	0/0:13,0:13:29.84:0,30,230	0/1:22,2:24:32.80:33,0,233	0/0:24,0:24:26.64:0,27,327	0/0:20,2:23:2.10:0,2,185	1/1:2,0:2:2.99:24,3,0
chr10	66548999	.	AAAAATAAAATAAAAT	A	9069.42	PASS	AB=0.694;AC=32;AF=0.667;AN=48;BaseQRankSum=5.637;DP=369;FS=0.677;HRun=0;HaplotypeScore=125.6425;InbreedingCoeff=0.6244;MQ=47.02;MQ0=17;MQRankSum=-4.172;QD=37.48;ReadPosRankSum=2.928;VQSLOD=4.0366;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:17:23.76:0,24,794	0/0:5,0:10:21.07:0,21,613	0/0:8,0:1:3.01:0,3,43	0/0:17,0:3:5.11:0,5,34	0/0:11,0:10:15.05:0,15,991	1/1:6,7:13:18.06:750,18,0	1/1:5,3:8:6.02:250,6,0	0/0:42,0:35:79.50:0,80,4018	1/1:4,7:11:15.05:610,15,0	1/1:13,5:18:12.01:300,12,0	0/1:11,8:19:70.95:951,0,71	1/1:5,5:10:9.03:375,9,0	./.	1/1:5,11:16:15.05:612,15,0	1/1:5,4:9:12.04:485,12,0	1/1:2,1:3:6.02:250,6,0	1/1:13,13:24:15.05:570,15,0	1/1:10,5:12:9.03:346,9,0	1/1:15,12:26:35.96:821,36,0	1/1:8,7:13:12.04:484,12,0	./.	./.	./.	0/0:3,0:3:6.02:0,6,430	0/1:7,6:13:99:333,0,200	1/1:11,12:22:30.02:946,30,0	1/1:3,9:12:21.07:862,21,0	1/1:3,1:3:3.01:125,3,0
chr10	66549598	.	A	AT	279.92	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.592;DP=411;FS=0.900;HRun=0;HaplotypeScore=45.5256;InbreedingCoeff=0.7993;MQ=79.93;MQ0=1;MQRankSum=1.507;QD=14.73;ReadPosRankSum=-0.499;VQSLOD=4.0138;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:51.15:0,51,677	0/0:3,0:3:6.02:0,6,83	0/0:25,0:17:19.16:0,19,279	0/0:19,0:11:13.65:0,14,142	1/1:7,12:19:15.91:369,16,0	0/0:20,0:20:57.19:0,57,792	0/0:10,0:10:30.10:0,30,409	0/0:30,0:30:83.86:0,84,1105	0/0:11,0:11:33.08:0,33,427	0/0:20,0:20:60.20:0,60,837	0/0:18,0:18:54.17:0,54,724	0/0:11,0:11:33.09:0,33,429	0/0:16,0:16:48.14:0,48,635	0/0:9,0:9:27.08:0,27,361	0/0:9,0:9:27.09:0,27,376	0/0:16,0:16:48.13:0,48,608	0/0:14,0:14:32.44:0,32,378	0/0:4,0:4:12.04:0,12,166	0/0:17,0:17:51.15:0,51,678	0/0:19,0:19:57.17:0,57,763	0/0:7,0:7:21.07:0,21,292	0/0:3,0:3:9.02:0,9,98	0/0:15,0:15:45.13:0,45,592	0/0:11,0:11:33.11:0,33,458	0/0:16,0:16:48.15:0,48,640	0/0:16,0:16:48.15:0,48,640	0/0:21,0:20:60.19:0,60,818	0/0:15,0:15:45.13:0,45,609
chr10	66551027	.	T	TTTTC	515.53	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-5.635;DP=453;FS=0.000;HRun=0;HaplotypeScore=85.2914;InbreedingCoeff=0.5776;MQ=71.59;MQ0=8;MQRankSum=-0.344;QD=12.57;ReadPosRankSum=-3.431;VQSLOD=2.3024;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:27:50.98:0,51,586	0/0:8,0:8:6.01:0,6,71	0/0:26,0:15:4.10:0,4,14	0/0:19,0:7:5.83:0,6,33	0/0:15,0:15:23.87:0,24,238	0/0:16,0:16:21.05:0,21,275	0/0:13,0:13:27.04:0,27,350	1/1:21,19:41:61.10:610,61,0	0/0:16,0:16:20.96:0,21,232	0/0:20,0:19:39.03:0,39,455	0/0:17,0:17:27.03:0,27,275	0/0:13,0:13:21:0,21,217	0/0:14,0:14:29.83:0,30,287	0/0:5,0:5:9.02:0,9,111	0/0:16,0:15:24.02:0,24,321	0/0:9,0:9:15.04:0,15,202	0/0:19,0:19:32.41:0,32,354	0/0:11,0:11:27.03:0,27,314	0/0:23,0:23:48.01:0,48,525	0/0:23,0:23:37.31:0,37,416	0/0:3,0:3:4.57:0,5,48	0/0:10,0:10:12.03:0,12,176	0/0:17,0:17:30.01:0,30,356	0/0:7,0:7:11.96:0,12,121	0/0:14,0:14:24.05:0,24,270	0/0:16,0:16:30.08:0,30,391	0/0:21,0:21:36.04:0,36,398	0/0:11,0:11:8.99:0,9,89
chr10	66551043	.	CT	C	1534.45	PASS	AB=0.698;AC=37;AF=0.661;AN=56;BaseQRankSum=-1.426;DP=457;FS=0.000;HRun=16;HaplotypeScore=51.4818;InbreedingCoeff=0.1912;MQ=58.01;MQ0=20;MQRankSum=0.749;QD=4.17;ReadPosRankSum=5.177;VQSLOD=-0.0140;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:13,10:25:27.06:147,27,0	1/1:5,1:8:3.23:8,3,0	0/0:25,0:7:4.77:0,5,25	0/0:24,1:6:0:0,0,0	0/1:7,8:16:15.38:30,0,15	0/1:4,11:16:0.03:91,0,0	1/1:1,8:12:23.75:125,24,0	0/1:37,4:41:34.98:35,0,125	1/1:6,7:14:9.64:47,10,0	1/1:8,8:17:21.31:118,21,0	1/1:13,3:18:7.88:54,8,0	0/1:8,5:13:27.08:51,0,27	0/1:13,3:16:0.79:1,0,121	1/1:2,4:7:8.75:54,9,0	0/1:6,9:15:1.09:91,0,1	1/1:2,5:7:11.76:72,12,0	0/1:8,8:19:7.18:78,0,7	1/1:9,4:13:2.15:58,2,0	1/1:16,11:25:33.01:192,33,0	0/1:13,8:21:1.44:99,0,1	1/1:3,2:4:2.86:18,3,0	0/0:12,1:12:2.89:0,3,113	0/0:15,1:16:9.89:0,10,100	0/0:9,1:9:5.95:0,6,45	0/1:6,10:16:10.47:57,0,10	1/1:3,9:14:25.67:148,26,0	1/1:10,6:16:13.34:77,13,0	1/1:1,4:5:5.87:36,6,0
chr10	66556080	.	T	TTTC	23843.19	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-2.884;DP=474;FS=1.411;HRun=0;HaplotypeScore=72.1308;InbreedingCoeff=0.9983;MQ=78.26;MQ0=0;MQRankSum=-6.550;QD=65.32;ReadPosRankSum=1.844;VQSLOD=6.0789;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,22:25:66.23:1620,66,0	1/1:0,8:10:24.08:590,24,0	0/0:9,0:9:24.06:0,24,358	0/0:20,0:20:60.19:0,60,1017	1/1:0,12:12:36.12:849,36,0	1/1:0,20:22:57.20:1399,57,0	1/1:0,17:18:42.14:1030,42,0	1/1:0,14:15:45.12:1004,45,0	1/1:0,13:13:29.79:737,30,0	1/1:0,23:23:69.19:1615,69,0	1/1:0,14:16:42.08:947,42,0	1/1:0,11:11:33.11:811,33,0	0/0:16,0:15:45.15:0,45,823	1/1:0,11:13:30.10:737,30,0	1/1:0,23:24:69.24:1696,69,0	1/1:0,16:17:48.16:1180,48,0	1/1:0,12:13:24.08:591,24,0	1/1:1,12:13:33.11:811,33,0	1/1:0,21:23:69.22:1629,69,0	1/1:1,13:14:39.13:944,39,0	1/1:0,16:16:48.16:1146,48,0	0/0:13,0:13:39.13:0,39,713	0/0:27,0:27:78.22:0,78,1391	0/0:24,0:24:72.25:0,72,1317	1/1:0,13:14:36.12:885,36,0	1/1:0,15:17:45.15:1043,45,0	1/1:0,25:25:72.25:1766,72,0	1/1:0,11:11:33.11:813,33,0
chr10	66556200	.	G	GT	926.19	PASS	AB=1.000;AC=41;AF=0.976;AN=42;BaseQRankSum=-0.037;DP=177;FS=0.000;HRun=0;HaplotypeScore=69.3109;InbreedingCoeff=-0.0607;MQ=35.62;MQ0=2;MQRankSum=1.585;QD=6.86;ReadPosRankSum=1.511;VQSLOD=3.3582;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:12:2.74:12,3,0	1/1:4,0:4:8.23:36,8,0	./.	0/1:2,0:2:5.65:19,0,6	1/1:8,0:8:3.88:21,4,0	1/1:0,9:9:3.01:47,3,0	./.	1/1:0,4:3:8.87:58,9,0	1/1:5,0:5:2.88:15,3,0	1/1:4,0:4:8.94:68,9,0	1/1:6,0:6:2.50:9,2,0	1/1:6,0:6:5.89:38,6,0	1/1:6,0:6:14.78:102,15,0	./.	1/1:10,0:10:2.74:12,3,0	./.	1/1:0,5:5:3.01:46,3,0	1/1:2,1:2:5.96:42,6,0	1/1:4,0:4:11.93:107,12,0	1/1:8,0:8:8.85:61,9,0	1/1:7,0:7:5.99:52,6,0	./.	1/1:8,0:8:2.98:22,3,0	1/1:8,0:8:2.98:22,3,0	./.	1/1:0,9:9:23.75:204,24,0	1/1:6,0:6:2.80:13,3,0	./.
chr10	66556430	.	T	TA	1222.76	PASS	AC=24;AF=1.000;AN=24;DP=214;FS=0.000;HRun=0;HaplotypeScore=15.0622;InbreedingCoeff=-0.1036;MQ=11.46;MQ0=179;QD=15.68;VQSLOD=4.4818;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	1/1:0,4:2:6.02:89,6,0	./.	./.	1/1:3,4:4:8.39:65,8,0	1/1:6,1:1:3.01:44,3,0	./.	./.	./.	1/1:5,3:3:9.03:143,9,0	1/1:2,2:2:6.01:71,6,0	./.	1/1:6,1:1:3.01:44,3,0	./.	./.	./.	./.	./.	./.	1/1:1,5:5:15.05:222,15,0	./.	./.	1/1:5,4:4:12.04:174,12,0	./.	1/1:5,7:7:21.06:275,21,0	1/1:3,2:2:6.02:95,6,0	1/1:4,1:1:3.01:43,3,0	1/1:3,1:1:3:29,3,0
chr10	66558318	.	C	CTA	22808.18	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=-12.760;DP=566;FS=1.766;HRun=0;HaplotypeScore=53.5666;InbreedingCoeff=0.9914;MQ=75.76;MQ0=4;MQRankSum=-3.022;QD=50.91;ReadPosRankSum=4.732;VQSLOD=5.7270;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,12:12:30.10:579,30,0	1/1:0,7:7:18.06:348,18,0	0/0:14,0:14:15.64:0,16,513	0/0:7,0:7:15.03:0,15,205	1/1:1,36:38:96.33:1854,96,0	1/1:1,16:18:39.13:753,39,0	1/1:0,16:16:48.16:927,48,0	0/0:22,0:22:66.21:0,66,973	1/1:1,16:17:48.16:927,48,0	1/1:2,22:24:72.23:1308,72,0	1/1:0,23:23:66.23:1275,66,0	1/1:3,11:15:33.11:629,33,0	0/0:16,0:16:45.15:0,45,687	1/1:1,19:20:51.17:985,51,0	1/1:0,20:19:51.17:985,51,0	1/1:1,23:24:69.24:1329,69,0	1/1:1,24:26:66.23:1273,66,0	1/1:0,15:15:45.15:868,45,0	1/1:1,14:14:42.13:776,42,0	1/1:0,34:33:84.29:1623,84,0	1/1:0,17:18:45.15:869,45,0	0/0:23,0:23:69.22:0,69,1036	0/0:26,0:26:66.16:0,66,954	0/0:10,0:10:30.10:0,30,459	1/1:0,25:25:72.25:1391,72,0	1/1:0,31:30:90.31:1693,90,0	1/1:3,37:40:99:2067,108,0	1/1:2,8:10:18.06:348,18,0
chr10	66559766	.	CT	C	170.20	PASS	AB=1.000;AC=8;AF=0.148;AN=54;BaseQRankSum=1.697;DP=359;FS=0.925;HRun=1;HaplotypeScore=58.1571;InbreedingCoeff=0.5521;MQ=70.23;MQ0=12;MQRankSum=-1.151;QD=4.15;ReadPosRankSum=-2.214;VQSLOD=-0.4326;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:40.80:0,41,358	0/0:9,0:9:24.44:0,24,244	0/0:20,0:17:25.33:0,25,548	0/0:32,0:19:42.46:0,42,563	0/0:9,0:9:15.01:0,15,156	1/1:6,1:7:6.07:37,6,0	1/1:17,1:17:17.46:154,17,0	0/0:23,0:22:62.86:0,63,789	0/1:5,0:5:6.97:30,0,7	0/0:9,0:9:9.88:0,10,80	0/0:11,0:11:10.25:0,10,88	0/1:5,0:5:15.14:20,0,15	0/0:16,0:16:45.13:0,45,666	1/1:6,0:6:5.69:66,6,0	0/0:9,1:10:23.87:0,24,208	0/0:19,0:18:19.88:0,20,143	0/0:17,0:15:4.43:0,4,199	0/0:6,1:6:14.25:0,14,150	0/0:12,0:11:23.94:0,24,244	0/0:7,0:6:3:0,3,26	0/0:11,0:10:18.01:0,18,198	0/0:17,0:15:39.12:0,39,567	0/0:20,0:20:51.15:0,51,731	0/0:15,0:15:42.13:0,42,626	./.	0/0:11,0:11:20.98:0,21,192	0/0:17,0:16:38.90:0,39,374	0/0:6,0:6:5.99:0,6,48
chr10	66559789	.	CCT	C	428.31	PASS	AB=1.000;AC=16;AF=0.286;AN=56;BaseQRankSum=3.534;DP=380;FS=0.754;HRun=0;HaplotypeScore=76.5062;InbreedingCoeff=0.2164;MQ=61.53;MQ0=14;MQRankSum=0.240;QD=2.87;ReadPosRankSum=-0.437;VQSLOD=1.8201;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:15.53:0,16,106	0/0:7,0:7:1.43:0,1,59	0/1:19,0:11:4.05:4,0,171	0/0:35,0:18:9.20:0,9,153	0/0:13,0:12:15.77:0,16,123	1/1:10,0:10:5.57:36,6,0	0/1:14,0:13:6.48:6,0,12	1/1:13,12:24:35.99:425,36,0	0/0:7,0:7:1.25:0,1,5	0/1:7,0:7:11.61:12,0,31	0/1:12,0:12:0:0,0,1	1/1:9,0:8:2.92:17,3,0	0/0:15,0:15:39.11:0,39,596	0/1:12,0:12:22.71:23,0,30	0/1:12,0:12:30.76:31,0,63	0/1:11,0:11:3.51:12,0,4	0/0:16,0:17:6.10:0,6,21	0/0:4,0:12:2.30:0,2,35	0/0:9,0:8:12.97:0,13,77	1/1:7,0:6:0.89:3,1,0	0/0:13,0:10:8.25:0,8,22	0/0:21,0:18:39.13:0,39,615	0/0:21,2:23:57.17:0,57,850	0/0:17,0:17:29.70:0,30,433	0/1:9,0:8:0.27:0,0,25	0/0:3,0:3:5.23:0,5,47	0/0:11,0:10:6.21:0,6,42	0/0:1,0:1:1.55:0,2,4
chr10	66559800	.	C	CTC	4005.80	PASS	AB=1.000;AC=40;AF=0.714;AN=56;BaseQRankSum=0.013;DP=411;FS=18.779;HRun=0;HaplotypeScore=69.0881;InbreedingCoeff=0.5601;MQ=72.24;MQ0=8;MQRankSum=-2.460;QD=14.26;ReadPosRankSum=-0.637;VQSLOD=1.7952;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:27:41.78:511,42,0	1/1:7,0:7:17.67:162,18,0	0/1:25,0:17:5.45:5,0,74	0/0:31,0:16:20.65:0,21,162	0/1:16,0:15:52.06:151,0,52	1/1:14,0:14:5.78:55,6,0	1/1:15,0:15:26.93:322,27,0	0/0:20,0:19:18.57:0,19,108	1/1:8,0:8:12.04:156,12,0	1/1:10,0:10:18.06:273,18,0	1/1:14,0:14:6.02:72,6,0	1/1:10,0:9:3.01:34,3,0	0/0:16,0:16:35.78:0,36,432	1/1:12,0:12:21.54:309,22,0	1/1:12,0:12:26.24:327,26,0	1/1:11,0:11:15.05:204,15,0	1/1:23,0:23:35.88:448,36,0	0/1:13,0:12:7.14:37,0,7	1/1:8,0:8:15.05:233,15,0	1/1:11,0:11:6.02:76,6,0	1/1:15,0:12:15.05:230,15,0	0/0:19,0:18:39.11:0,39,454	0/0:27,0:27:54.11:0,54,612	0/0:17,0:17:27.08:0,27,325	1/1:13,0:12:17.95:238,18,0	0/1:6,0:6:28.93:41,0,29	1/1:3,6:10:5.88:76,6,0	1/1:1,0:1:3.01:46,3,0
chr10	66561654	.	TG	T	4210.30	PASS	AB=0.699;AC=46;AF=0.958;AN=48;BaseQRankSum=-0.126;DP=209;FS=0.000;HRun=5;HaplotypeScore=37.4588;InbreedingCoeff=-0.0786;MQ=36.13;MQ0=14;MQRankSum=-2.914;QD=21.59;ReadPosRankSum=0.346;VQSLOD=3.4419;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,5:5:9.03:102,9,0	1/1:2,2:4:6.02:68,6,0	./.	./.	1/1:1,19:20:36.09:397,36,0	1/1:1,10:11:24.07:272,24,0	1/1:0,9:9:21.06:238,21,0	1/1:4,7:9:21.06:238,21,0	1/1:0,7:6:15.04:170,15,0	1/1:2,8:9:21.06:238,21,0	1/1:1,15:15:33.09:374,33,0	1/1:0,6:6:15.04:167,15,0	1/1:1,5:5:9.03:102,9,0	1/1:0,4:4:12.03:136,12,0	1/1:1,3:3:9.03:102,9,0	1/1:0,5:5:12.03:134,12,0	0/1:5,6:7:66.97:87,0,67	./.	1/1:4,6:6:18.05:204,18,0	1/1:1,8:9:21.06:237,21,0	./.	1/1:0,1:1:3.01:34,3,0	1/1:1,7:6:15.04:170,15,0	0/1:2,1:3:27.95:28,0,35	1/1:0,3:3:6.02:68,6,0	1/1:3,11:14:33.09:373,33,0	1/1:0,9:7:18.05:204,18,0	1/1:4,2:5:6.02:68,6,0
chr10	66562176	.	T	TATC	19795.38	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=-11.611;DP=457;FS=9.830;HRun=0;HaplotypeScore=53.5220;InbreedingCoeff=0.9940;MQ=80.70;MQ0=0;MQRankSum=-4.515;QD=56.40;ReadPosRankSum=5.107;VQSLOD=6.0838;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,21:24:63.22:1436,63,0	1/1:0,5:5:15.05:346,15,0	0/0:8,0:8:24.08:0,24,393	0/0:18,0:18:25.52:0,26,666	1/1:0,27:27:51.18:1174,51,0	1/1:1,8:9:24.08:553,24,0	1/1:3,12:15:33.11:739,33,0	0/0:32,0:32:96.33:0,96,1637	1/1:1,20:21:54.19:1244,54,0	1/1:1,19:19:54.18:1211,54,0	1/1:1,14:15:30.10:691,30,0	1/1:0,14:14:36.12:829,36,0	0/0:12,0:12:36.12:0,36,613	1/1:0,19:20:48.16:1106,48,0	1/1:0,24:24:60.21:1382,60,0	1/1:0,15:15:42.14:953,42,0	1/1:0,15:15:42.14:949,42,0	1/1:0,9:9:24.08:553,24,0	1/1:1,13:15:42.11:870,42,0	1/1:0,10:10:27.09:621,27,0	1/1:3,18:21:39.12:899,39,0	0/0:12,0:12:32.98:0,33,563	0/0:9,0:9:24.08:0,24,408	0/0:15,0:15:45.15:0,45,760	1/1:0,12:12:27.09:622,27,0	1/1:0,22:23:69.24:1543,69,0	1/1:1,28:29:69.24:1590,69,0	1/1:0,7:8:21.07:484,21,0
chr10	66563028	.	GT	G	107.76	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=-2.679;DP=461;FS=1.697;HRun=1;HaplotypeScore=114.4372;InbreedingCoeff=0.8101;MQ=76.43;MQ0=0;MQRankSum=-1.158;QD=4.31;ReadPosRankSum=-0.506;VQSLOD=0.0488;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:15:27.95:138,28,0	1/1:8,0:8:21.56:89,22,0	0/0:19,0:17:44.74:0,45,602	0/0:10,0:9:15.95:0,16,174	0/0:29,0:29:63.50:0,63,324	0/0:17,0:17:41.66:0,42,192	0/0:9,0:9:13.62:0,14,60	0/0:36,0:36:80.15:0,80,785	0/0:18,1:19:17.34:0,17,188	0/0:25,0:24:61.60:0,62,331	0/0:12,0:12:30.14:0,30,149	0/0:19,0:19:42.02:0,42,190	0/0:15,0:15:45.14:0,45,665	0/0:5,0:5:6.47:0,6,30	0/0:15,0:14:32.91:0,33,140	0/0:19,0:18:38.76:0,39,179	0/0:14,0:14:24.16:0,24,126	0/0:20,0:20:36.05:0,36,172	0/0:19,0:19:42.01:0,42,221	0/0:25,1:26:49.52:0,50,262	0/1:2,0:2:0.01:0,0,0	0/0:12,0:12:36.11:0,36,538	0/0:21,0:21:59.79:0,60,876	0/0:10,0:10:30.08:0,30,444	0/0:17,0:16:41.96:0,42,212	0/0:25,1:26:65.97:0,66,361	0/0:16,1:17:6.24:0,6,90	0/0:5,0:5:8.29:0,8,37
chr10	66563029	.	TG	T	4075.46	PASS	AB=0.971;AC=43;AF=0.768;AN=56;BaseQRankSum=10.423;DP=463;FS=2.513;HRun=4;HaplotypeScore=101.0332;InbreedingCoeff=0.8459;MQ=77.41;MQ0=0;MQRankSum=-2.767;QD=10.93;ReadPosRankSum=5.169;VQSLOD=1.0907;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,15:16:30.09:357,30,0	1/1:0,8:8:24.07:287,24,0	0/0:20,0:18:36.97:0,37,462	0/0:10,0:9:18.37:0,18,190	1/1:29,0:29:57.60:266,58,0	1/1:17,0:17:43.23:197,43,0	1/1:9,0:9:16.85:87,17,0	0/1:33,1:34:22.27:168,0,22	1/1:19,0:19:33.38:205,33,0	1/1:26,0:25:47.49:313,47,0	1/1:12,0:12:20.45:94,20,0	1/1:18,0:18:44.90:224,45,0	0/0:16,0:16:42.59:0,43,551	1/1:5,0:5:11.48:68,11,0	1/1:16,0:15:36.63:177,37,0	1/1:20,0:19:32.63:197,33,0	1/1:13,0:13:22.27:111,22,0	1/1:18,0:18:35.96:164,36,0	1/1:19,0:19:42.11:241,42,0	1/1:27,0:27:35.77:183,36,0	1/1:2,0:2:3:25,3,0	0/0:13,0:13:39.10:0,39,494	0/0:21,0:21:52.19:0,52,658	0/0:10,0:10:27.08:0,27,360	1/1:18,0:17:39.35:184,39,0	1/1:25,0:25:52.53:296,53,0	1/1:17,0:17:36.48:196,36,0	1/1:5,0:5:8.23:36,8,0
chr10	66563032	.	G	GT	6135.41	PASS	AB=0.972;AC=39;AF=0.696;AN=56;BaseQRankSum=8.348;DP=483;FS=1.255;HRun=0;HaplotypeScore=99.6810;InbreedingCoeff=0.8976;MQ=76.13;MQ0=0;MQRankSum=-3.644;QD=16.63;ReadPosRankSum=6.043;VQSLOD=7.1350;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:26.79:0,27,101	0/0:8,0:8:18.97:0,19,65	0/0:17,0:16:29:0,29,494	0/0:14,0:13:19.37:0,19,241	1/1:4,1:31:62.52:304,63,0	1/1:1,16:17:43.27:444,43,0	1/1:1,8:9:13.21:147,13,0	0/1:34,1:35:0.69:1,0,230	1/1:7,9:17:14.85:259,15,0	1/1:5,20:24:32.97:525,33,0	1/1:3,10:14:23.91:246,24,0	1/1:2,18:20:38.42:415,38,0	0/0:16,0:16:48.15:0,48,652	1/1:1,4:5:8.66:93,9,0	1/1:1,15:15:39:381,39,0	1/1:1,17:19:44.47:433,44,0	1/1:2,10:12:24.44:230,24,0	1/1:3,17:21:34.81:331,35,0	1/1:3,19:22:35.92:418,36,0	1/1:6,24:30:25.87:528,26,0	1/1:2,1:3:2.28:16,2,0	0/0:13,0:13:39.12:0,39,528	0/0:21,0:21:60.18:0,60,800	0/0:9,0:9:27.09:0,27,377	1/1:3,14:17:36.92:361,37,0	1/1:6,19:26:54.58:608,55,0	1/1:5,17:22:32.19:306,32,0	1/1:0,6:6:9.02:89,9,0
chr10	66563464	.	C	CA	12273.22	PASS	AC=48;AF=1.000;AN=48;BaseQRankSum=-2.424;DP=334;FS=4.117;HRun=2;HaplotypeScore=227.8189;InbreedingCoeff=-0.0116;MQ=32.04;MQ0=0;MQRankSum=-0.664;QD=37.08;ReadPosRankSum=2.433;VQSLOD=4.0427;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,7:10:18.92:262,19,0	1/1:0,6:6:18.06:259,18,0	./.	./.	1/1:3,24:27:63.21:905,63,0	1/1:0,15:15:45.15:647,45,0	1/1:0,6:6:18.06:259,18,0	1/1:6,26:32:78.18:1075,78,0	1/1:1,12:13:36.12:517,36,0	1/1:3,12:15:36.12:518,36,0	1/1:2,12:14:33.11:474,33,0	1/1:1,8:9:21.07:302,21,0	1/1:2,16:18:42.66:682,43,0	1/1:2,8:10:21.07:302,21,0	1/1:1,14:15:36.12:517,36,0	1/1:2,11:13:33.11:474,33,0	1/1:0,4:4:12.04:172,12,0	./.	1/1:1,12:13:39.13:561,39,0	1/1:3,23:26:66.22:949,66,0	./.	1/1:0,6:6:15.05:215,15,0	1/1:0,10:10:30.01:385,30,0	1/1:0,2:2:6.02:86,6,0	1/1:2,17:19:51.17:732,51,0	1/1:1,20:21:60.20:860,60,0	1/1:1,24:25:72.24:1035,72,0	1/1:0,2:2:6.02:86,6,0
chr10	66563471	.	T	TA	11218.69	PASS	AC=48;AF=0.960;AN=50;BaseQRankSum=-1.277;DP=325;FS=7.569;HRun=2;HaplotypeScore=219.8565;InbreedingCoeff=0.5244;MQ=32.10;MQ0=0;MQRankSum=-0.911;QD=34.73;ReadPosRankSum=2.385;VQSLOD=3.5572;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,8:9:21.07:302,21,0	1/1:0,6:6:15.05:216,15,0	./.	0/0:1,0:1:2.98:0,3,22	1/1:5,19:24:51.17:733,51,0	1/1:2,14:16:44.72:614,45,0	1/1:0,5:5:15.05:216,15,0	1/1:9,22:31:72.24:1024,72,0	1/1:2,11:13:35.91:487,36,0	1/1:1,11:12:33.11:475,33,0	1/1:2,11:13:30.10:431,30,0	1/1:3,7:10:23.79:314,24,0	1/1:2,16:18:45.13:646,45,0	1/1:1,10:11:27.09:388,27,0	1/1:3,11:14:32.85:443,33,0	1/1:2,11:13:27.23:404,27,0	1/1:2,3:5:10.27:132,10,0	./.	1/1:3,12:15:36.12:518,36,0	1/1:2,23:25:66.22:949,66,0	./.	1/1:1,4:5:11.97:149,12,0	1/1:0,10:10:24.08:345,24,0	1/1:1,2:3:3.01:43,3,0	1/1:2,16:18:48.12:666,48,0	1/1:2,18:20:54.18:776,54,0	1/1:4,21:25:60.20:862,60,0	1/1:0,2:2:6.02:86,6,0
chr10	66563488	.	A	AAT	14477.10	PASS	AB=0.571;AC=49;AF=0.942;AN=52;BaseQRankSum=-1.777;DP=271;FS=3.022;HRun=0;HaplotypeScore=127.1906;InbreedingCoeff=0.3750;MQ=39.25;MQ0=0;MQRankSum=-1.909;QD=54.02;ReadPosRankSum=1.616;VQSLOD=5.0615;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,7:7:21.07:423,21,0	1/1:0,4:4:12.04:242,12,0	./.	0/0:2,0:2:3.01:0,3,42	1/1:3,13:16:45.03:822,45,0	1/1:0,17:17:51.18:1029,51,0	1/1:1,4:5:12.04:238,12,0	1/1:7,24:31:86.97:1471,87,0	1/1:0,9:9:27.09:538,27,0	1/1:0,10:10:30.10:606,30,0	1/1:1,10:11:33.02:587,33,0	1/1:0,8:8:24.08:480,24,0	1/1:0,14:14:42.14:847,42,0	1/1:2,9:11:33.06:623,33,0	1/1:1,11:12:33.04:598,33,0	1/1:0,11:11:33.11:666,33,0	1/1:1,2:3:9:137,9,0	./.	1/1:3,10:13:36.03:643,36,0	1/1:3,17:20:60.03:1092,60,0	1/1:0,4:4:8.86:94,9,0	1/1:0,2:2:6.02:121,6,0	1/1:0,8:8:24.08:484,24,0	0/1:1,3:4:5.76:55,0,6	1/1:1,12:14:42.10:794,42,0	1/1:1,14:15:45.10:841,45,0	1/1:2,15:17:48.12:923,48,0	1/1:0,2:2:6.02:121,6,0
chr10	66566439	.	T	TA	3637.24	PASS	AB=0.718;AC=34;AF=0.607;AN=56;BaseQRankSum=-2.395;DP=410;FS=15.895;HRun=14;HaplotypeScore=72.6746;InbreedingCoeff=0.3741;MQ=62.46;MQ0=3;MQRankSum=-1.528;QD=10.60;ReadPosRankSum=0.861;VQSLOD=1.5521;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:16.58:0,17,192	0/0:5,0:5:14.71:0,15,91	0/1:19,0:11:7.59:8,0,26	0/0:9,0:6:4.63:0,5,19	1/1:12,0:24:41.47:223,41,0	1/1:19,6:25:13.65:228,14,0	0/1:3,3:7:0.08:90,0,0	1/1:16,16:32:20.73:269,21,0	0/1:6,8:13:19.27:88,0,19	1/1:7,8:15:13.60:225,14,0	1/1:5,8:12:3.78:133,4,0	0/1:5,7:12:0.18:158,0,0	0/0:15,0:16:25.26:0,25,147	1/1:10,7:18:25.78:297,26,0	1/1:7,11:18:5.20:166,5,0	1/1:3,3:6:12:106,12,0	1/1:5,16:21:35.99:315,36,0	0/1:3,4:7:4.26:91,0,4	0/1:13,15:27:6.67:259,0,7	0/1:10,2:12:16.26:89,0,16	1/1:3,3:6:11.95:98,12,0	0/0:2,0:2:2.94:0,3,19	0/0:10,0:10:14.57:0,15,90	0/0:5,0:5:11.77:0,12,75	1/1:4,13:17:31.55:268,32,0	0/1:12,8:20:28.93:185,0,29	1/1:11,5:16:16.91:233,17,0	1/1:3,7:10:3.04:109,3,0
chr10	66566475	.	TA	T	953.64	PASS	AB=0.798;AC=43;AF=0.796;AN=54;BaseQRankSum=2.946;DP=345;FS=8.243;HRun=17;HaplotypeScore=67.0659;InbreedingCoeff=0.0784;MQ=61.77;MQ0=6;MQRankSum=0.258;QD=2.93;ReadPosRankSum=1.278;VQSLOD=-0.7419;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:12,4:17:28.59:29,0,33	1/1:1,3:4:5.77:33,6,0	1/1:22,0:7:3.28:11,3,0	0/1:11,1:7:2.74:3,0,46	0/1:19,3:22:34.40:34,0,70	1/1:8,11:19:16.36:89,16,0	1/1:5,3:6:11.64:66,12,0	1/1:21,2:28:11.46:50,11,0	1/1:9,2:10:8.56:49,9,0	1/1:10,3:13:8.50:50,8,0	0/1:5,2:8:7.75:8,0,36	0/1:6,3:10:10.31:42,0,10	0/0:12,1:13:0.92:0,1,84	0/1:10,2:15:9.39:32,0,9	1/1:10,2:12:7.82:40,8,0	1/1:4,3:7:5.61:33,6,0	1/1:9,3:12:8.42:50,8,0	1/1:5,4:9:8.68:50,9,0	1/1:13,3:19:18.64:87,19,0	1/1:5,6:12:16.84:99,17,0	1/1:6,2:9:10.62:55,11,0	./.	0/1:7,2:9:24.34:24,0,55	0/0:6,0:6:11.96:0,12,94	1/1:7,0:9:2.73:16,3,0	1/1:9,5:14:14.46:83,14,0	1/1:13,2:14:8.32:49,8,0	1/1:5,3:7:2.44:16,2,0
chr10	66567876	.	ATTTC	A	1481.98	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=8.424;DP=558;FS=14.341;HRun=0;HaplotypeScore=86.1640;InbreedingCoeff=0.9891;MQ=71.17;MQ0=0;MQRankSum=-0.377;QD=43.59;ReadPosRankSum=2.346;VQSLOD=3.4231;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:75.23:0,75,1907	0/0:11,0:11:33.11:0,33,891	0/0:9,0:9:24.08:0,24,547	0/0:7,0:7:19.62:0,20,467	1/1:4,30:34:87.21:1577,87,0	0/0:34,0:34:99:0,99,2661	0/0:15,0:15:45.15:0,45,1214	0/0:32,0:32:93.32:0,93,2482	0/0:17,0:17:51.18:0,51,1377	0/0:34,0:34:99:0,102,2701	0/0:21,0:21:60.21:0,60,1607	0/0:14,0:14:39.13:0,39,1053	0/0:13,0:13:39.13:0,39,1053	0/0:9,0:9:27.09:0,27,698	0/0:20,0:20:57.20:0,57,1533	0/0:9,0:9:27.09:0,27,698	0/0:23,0:23:66.23:0,66,1781	0/0:15,0:15:42.14:0,42,1113	0/0:12,0:12:36.12:0,36,972	0/0:45,0:45:99:0,132,3556	0/0:15,0:15:42.14:0,42,1134	0/0:32,0:32:93.32:0,93,2512	0/0:15,0:15:45.15:0,45,1208	0/0:11,0:11:30.10:0,30,809	0/0:18,0:18:54.19:0,54,1427	0/0:16,0:16:48.16:0,48,1285	0/0:40,0:39:99:0,117,3158	0/0:11,0:11:33.11:0,33,891
chr10	66568542	.	TAA	T	5427.74	PASS	AB=1.000;AC=41;AF=0.732;AN=56;BaseQRankSum=-3.082;DP=405;FS=5.686;HRun=13;HaplotypeScore=60.6242;InbreedingCoeff=0.8126;MQ=77.10;MQ0=3;MQRankSum=0.027;QD=17.80;ReadPosRankSum=5.090;VQSLOD=3.8496;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,16:24:33.01:320,33,0	1/1:2,4:6:9.01:87,9,0	0/1:24,0:19:9.96:10,0,122	0/0:16,0:13:15.49:0,15,129	0/0:4,1:16:0.93:0,1,78	1/1:8,11:18:41.76:383,42,0	1/1:0,8:9:23.78:216,24,0	0/0:18,0:23:36.30:0,36,142	1/1:1,11:12:23.98:223,24,0	1/1:1,9:11:20.97:253,21,0	1/1:1,7:8:21.02:204,21,0	1/1:2,11:13:23.98:223,24,0	0/0:9,0:9:24.03:0,24,290	1/1:1,7:8:20.98:194,21,0	1/1:2,9:11:20.76:186,21,0	1/1:3,11:15:29.77:274,30,0	1/1:4,17:20:48.04:465,48,0	1/1:3,5:9:11.66:140,12,0	1/1:8,18:26:54.05:524,54,0	1/1:4,9:14:26.76:244,27,0	1/1:0,2:2:3:29,3,0	0/0:8,0:10:20.56:0,21,268	0/0:17,0:17:33.09:0,33,641	0/0:7,0:7:12.04:0,12,173	1/1:1,13:14:36.06:349,36,0	1/1:4,18:22:54.07:524,54,0	1/1:3,19:25:47.36:463,47,0	1/1:6,5:11:11.97:116,12,0
chr10	66570981	.	AG	A	1156.35	PASS	AC=2;AF=0.037;AN=54;BaseQRankSum=1.756;DP=527;FS=0.000;HRun=1;HaplotypeScore=56.6037;InbreedingCoeff=0.9809;MQ=75.65;MQ0=0;MQRankSum=4.794;QD=37.30;ReadPosRankSum=-4.144;VQSLOD=2.2985;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:81.28:0,81,1279	0/0:5,0:5:15.05:0,15,229	0/0:17,0:17:51.13:0,51,774	0/0:10,0:10:24.08:0,24,375	0/0:21,0:21:57.07:0,57,866	0/0:30,0:30:84.28:0,84,1305	0/0:14,0:14:42.13:0,42,633	1/1:0,31:31:93.28:1251,93,0	0/0:15,0:15:45.14:0,45,682	0/0:18,0:18:54.18:0,54,843	0/0:23,0:23:66.22:0,66,1033	0/0:13,0:13:39.12:0,39,599	0/0:17,0:17:51.17:0,51,799	0/0:20,0:20:57.18:0,57,877	0/0:18,0:17:48.16:0,48,766	0/0:25,0:25:72.23:0,72,1103	0/0:24,0:24:72.25:0,72,1145	0/0:17,0:17:51.17:0,51,807	0/0:21,0:21:63.20:0,63,974	0/0:22,0:22:66.22:0,66,1044	0/0:20,0:20:60.20:0,60,956	0/0:9,0:9:27.09:0,27,389	0/0:17,0:17:51.17:0,51,792	0/0:10,0:10:30.10:0,30,479	0/0:26,0:26:78.26:0,78,1206	0/0:33,0:33:99:0,99,1581	0/0:23,0:23:69.23:0,69,1060	./.
chr10	66571741	.	T	TGA	15997.79	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=-11.571;DP=466;FS=0.445;HRun=0;HaplotypeScore=45.9779;InbreedingCoeff=0.9940;MQ=83.42;MQ0=2;MQRankSum=-4.586;QD=43.71;ReadPosRankSum=5.315;VQSLOD=6.1200;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,18:20:45.15:798,45,0	1/1:0,10:10:21.07:373,21,0	0/0:16,0:16:44.74:0,45,597	0/0:12,0:12:33.08:0,33,434	1/1:4,21:25:54.19:958,54,0	1/1:0,23:21:63.22:1118,63,0	1/1:1,6:7:18.06:320,18,0	0/0:23,0:23:57.18:0,57,768	1/1:0,8:8:18.06:319,18,0	1/1:1,24:24:69.23:1174,69,0	1/1:0,25:26:57.67:1013,58,0	1/1:1,12:13:33.11:586,33,0	0/0:8,0:8:21.07:0,21,286	1/1:2,10:12:24.08:426,24,0	1/1:1,17:18:48.16:852,48,0	1/1:1,14:15:45.14:770,45,0	1/1:3,17:19:45.15:798,45,0	1/1:1,10:11:27.09:479,27,0	1/1:2,16:18:48.16:839,48,0	1/1:0,20:21:54.19:958,54,0	1/1:1,16:17:48.16:852,48,0	0/0:10,0:10:30.10:0,30,412	0/0:15,0:15:30.10:0,30,411	0/0:16,0:16:38.46:0,38,570	1/1:2,20:22:57.20:1012,57,0	1/1:4,22:26:66.21:1142,66,0	1/1:2,17:19:48.16:839,48,0	1/1:1,9:10:21.07:373,21,0
chr10	66573023	.	G	GT	739.28	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-7.354;DP=614;FS=10.973;HRun=8;HaplotypeScore=58.7511;InbreedingCoeff=0.9663;MQ=68.48;MQ0=0;MQRankSum=-1.922;QD=26.40;ReadPosRankSum=-4.024;VQSLOD=2.1372;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,111,1016	0/0:5,0:5:11.97:0,12,99	0/0:22,0:18:47.54:0,48,399	0/0:20,0:17:41.92:0,42,371	0/0:22,0:22:57.01:0,57,517	0/0:31,0:31:84.04:0,84,769	0/0:9,0:9:27.01:0,27,247	1/1:3,24:28:75.04:834,75,0	0/0:22,0:22:60.03:0,60,549	0/0:26,0:26:71.86:0,72,655	0/0:30,0:30:44.45:0,44,578	0/0:20,0:20:54.02:0,54,494	0/0:13,0:13:27.01:0,27,247	0/0:19,0:19:51.03:0,51,467	0/0:23,0:24:56.05:0,56,500	0/0:25,0:25:63.02:0,63,577	0/0:33,0:32:84.04:0,84,769	0/0:20,0:20:32.38:0,32,420	0/0:11,0:11:27.01:0,27,247	0/0:31,1:32:49.42:0,49,706	0/0:12,0:12:33:0,33,298	0/0:15,0:15:45.02:0,45,412	0/0:30,0:30:72.01:0,72,654	0/0:21,0:21:57.03:0,57,522	0/0:16,0:16:48.03:0,48,439	0/0:29,0:29:69:0,69,626	0/0:24,0:24:44.61:0,45,579	0/0:14,0:14:38.92:0,39,326
chr10	66573634	.	T	TTG	1093.51	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-5.148;DP=616;FS=0.763;HRun=0;HaplotypeScore=69.2257;InbreedingCoeff=0.9955;MQ=68.31;MQ0=1;MQRankSum=-0.254;QD=40.50;ReadPosRankSum=2.027;VQSLOD=5.4940;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,20:20:48.16:844,48,0	1/1:0,7:7:21.07:370,21,0	0/0:16,0:13:24.98:0,25,262	0/0:21,0:18:32.23:0,32,468	0/0:32,0:32:93.28:0,93,1263	0/0:25,0:25:72.23:0,72,1016	0/0:13,0:13:39.12:0,39,529	0/0:33,0:33:87.25:0,87,1124	0/0:22,0:22:60.20:0,60,841	0/0:31,0:31:90.29:0,90,1246	0/0:25,0:25:69.16:0,69,912	0/0:19,0:19:57.18:0,57,801	0/0:31,0:31:93.28:0,93,1299	0/0:16,0:16:48.13:0,48,616	0/0:24,0:24:69.21:0,69,937	0/0:24,0:24:66.20:0,66,880	0/0:16,0:16:48.13:0,48,658	0/0:11,0:11:29.96:0,30,346	0/0:24,0:23:66.19:0,66,873	0/0:33,0:33:95.76:0,96,1246	0/0:8,0:8:24.08:0,24,329	0/0:19,0:19:57.15:0,57,731	0/0:21,0:21:63.20:0,63,876	0/0:12,0:12:36.10:0,36,467	0/0:23,0:23:69.20:0,69,935	0/0:24,0:24:69.19:0,69,911	0/0:42,0:42:99:0,126,1696	0/0:24,0:24:72.19:0,72,983
chr10	66574946	.	A	ATT	221.81	PASS	AB=0.970;AC=13;AF=0.361;AN=36;BaseQRankSum=-2.135;DP=289;FS=19.589;HRun=0;HaplotypeScore=29.8361;InbreedingCoeff=0.1245;MQ=37.03;MQ0=157;MQRankSum=-0.510;QD=2.46;ReadPosRankSum=-0.132;VQSLOD=-0.6391;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:2:0.47:0,0,1	0/0:4,0:1:0.47:0,0,1	0/0:39,0:2:6.01:0,6,70	0/0:35,0:5:9.02:0,9,105	0/0:8,0:4:5.25:0,5,23	./.	./.	0/1:12,0:5:8.25:66,0,8	./.	./.	./.	0/0:5,0:1:2.97:0,3,20	0/0:11,0:6:5.61:0,6,46	1/1:1,1:1:3.01:43,3,0	0/1:3,0:2:0:0,0,0	./.	./.	0/1:9,0:4:11.14:11,0,50	0/1:9,1:4:38.32:38,0,42	./.	1/1:5,1:4:2.82:36,3,0	0/0:3,0:1:2.97:0,3,20	0/0:18,0:14:8.88:0,9,75	0/1:15,1:13:56.66:57,0,65	./.	1/1:11,0:1:3.01:36,3,0	./.	1/1:13,1:2:3.01:46,3,0
chr10	66575022	.	GA	G	775.12	PASS	AB=0.824;AC=27;AF=0.614;AN=44;BaseQRankSum=-1.015;DP=173;FS=13.957;HRun=8;HaplotypeScore=44.4301;InbreedingCoeff=0.4110;MQ=24.41;MQ0=52;MQRankSum=0.322;QD=6.92;ReadPosRankSum=2.116;VQSLOD=0.0388;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,1:5:2.53:22,3,0	./.	./.	./.	./.	1/1:1,3:4:9.01:82,9,0	0/1:11,3:5:10.11:74,0,10	1/1:6,8:11:26.25:234,26,0	1/1:3,0:3:2.73:12,3,0	0/0:6,1:5:0.47:0,0,2	0/0:2,0:1:0:0,0,0	1/1:4,2:4:5.21:52,5,0	0/0:6,0:5:14.99:0,15,163	1/1:3,2:5:5.66:55,6,0	1/1:5,5:9:14.52:141,15,0	1/1:3,1:2:0.47:1,0,0	1/1:16,3:15:3.11:40,3,0	1/1:4,1:2:5.96:48,6,0	./.	0/0:2,1:2:0:0,0,0	1/1:7,0:1:3:27,3,0	0/0:1,0:1:3.01:0,3,36	0/0:12,0:11:18.94:0,19,220	0/0:4,0:3:1.55:0,2,4	1/1:6,2:6:3.58:53,4,0	1/1:3,2:3:5.56:56,6,0	0/0:5,0:4:0.86:0,1,2	./.
chr10	66575034	.	CCAAA	C	1626.03	PASS	AB=0.891;AC=33;AF=0.611;AN=54;BaseQRankSum=5.442;DP=194;FS=37.751;HRun=0;HaplotypeScore=48.9865;InbreedingCoeff=-0.0027;MQ=30.36;MQ0=16;MQRankSum=-0.874;QD=10.16;ReadPosRankSum=3.124;VQSLOD=0.8172;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,0:6:8.81:87,9,0	./.	0/0:4,0:1:0:0,0,0	0/0:19,0:2:3.01:0,3,32	0/1:8,0:8:8.03:23,0,8	0/1:8,0:8:7.10:109,0,7	1/1:7,0:6:12.30:132,12,0	1/1:12,0:10:4.91:71,5,0	1/1:4,1:5:8.97:92,9,0	1/1:1,6:7:14.96:172,15,0	1/1:1,1:2:6.02:76,6,0	1/1:7,0:6:7.17:85,7,0	0/0:5,0:5:12.27:0,12,104	0/1:6,0:6:14.72:92,0,15	0/1:10,1:11:9.22:68,0,9	1/1:4,0:4:11.38:72,11,0	0/1:16,2:19:19.85:217,0,20	1/1:3,0:2:5.33:27,5,0	0/1:4,1:4:20.61:36,0,21	0/1:4,2:8:33.09:47,0,33	1/1:4,0:2:2.29:12,2,0	0/0:2,0:2:5.91:0,6,37	0/1:9,0:9:0.76:1,0,113	0/0:4,0:4:3.40:0,3,18	0/1:8,0:8:3.73:174,0,4	0/1:4,2:6:17.29:49,0,17	0/1:7,0:8:27.63:81,0,28	1/1:2,1:3:5.85:58,6,0
chr10	66575138	.	G	GT	830.60	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-6.708;DP=439;FS=8.269;HRun=7;HaplotypeScore=47.9783;InbreedingCoeff=0.9045;MQ=76.55;MQ0=1;MQRankSum=0.532;QD=23.73;ReadPosRankSum=0.921;VQSLOD=3.4576;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,30:33:72.22:870,72,0	1/1:0,2:2:6.02:72,6,0	0/0:15,0:14:36.05:0,36,345	0/0:16,0:16:16.23:0,16,141	0/0:12,0:12:27.02:0,27,254	0/0:15,0:15:42.06:0,42,405	0/0:18,0:18:53.94:0,54,492	0/0:32,1:32:81.10:0,81,772	0/0:7,0:7:21.02:0,21,197	0/0:21,0:21:57.04:0,57,537	0/0:16,0:16:48.08:0,48,463	0/0:11,0:11:33.05:0,33,318	0/0:13,0:13:36.06:0,36,347	0/0:11,0:11:27.04:0,27,260	0/0:15,0:15:42.07:0,42,405	0/0:7,0:7:21.03:0,21,203	0/0:31,0:31:81.58:0,82,775	0/0:7,0:7:18.03:0,18,174	0/0:23,0:23:61.60:0,62,561	0/0:22,0:22:63.10:0,63,608	0/0:22,0:22:60.05:0,60,565	0/0:5,0:5:12.02:0,12,116	0/0:10,0:10:30.05:0,30,290	0/0:7,0:7:18.02:0,18,174	0/0:14,0:14:39.06:0,39,377	0/0:21,0:20:56.12:0,56,527	0/0:25,0:25:72.10:0,72,689	0/0:7,0:7:18.03:0,18,174
chr10	66575236	.	A	ATCTGCC	546.69	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-1.522;DP=388;FS=0.000;HRun=0;HaplotypeScore=79.7965;InbreedingCoeff=0.8070;MQ=67.61;MQ0=1;MQRankSum=-2.159;QD=42.05;ReadPosRankSum=0.311;VQSLOD=3.3604;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:60.16:0,60,1253	0/0:5,0:5:12.04:0,12,260	0/0:18,0:16:24.08:0,24,512	0/0:17,0:17:36.12:0,36,710	1/1:2,8:13:23.95:640,24,0	0/0:22,0:22:54.18:0,54,1141	0/0:18,0:18:48.16:0,48,1019	0/0:18,0:18:36.11:0,36,711	0/0:14,0:14:33.11:0,33,660	0/0:17,0:17:30.10:0,30,632	0/0:15,0:15:42.14:0,42,908	0/0:17,0:17:51.17:0,51,1077	0/0:13,0:13:30.10:0,30,628	0/0:9,0:9:21.07:0,21,394	0/0:12,0:12:33.07:0,33,669	0/0:15,0:15:42.14:0,42,889	0/0:11,0:11:30.10:0,30,649	0/0:4,0:4:9.03:0,9,195	0/0:13,0:13:27.09:0,27,547	0/0:18,0:18:51.16:0,51,1063	0/0:12,0:12:24.08:0,24,504	0/0:2,0:2:6.01:0,6,91	0/0:10,0:10:21.07:0,21,426	0/0:7,0:7:18.06:0,18,389	0/0:12,0:12:30.10:0,30,649	0/0:22,0:22:60.18:0,60,1200	0/0:23,0:23:60.20:0,60,1245	0/0:5,0:5:15.05:0,15,324
chr10	66575311	.	C	CT	1142.93	PASS	AB=0.778;AC=33;AF=0.589;AN=56;BaseQRankSum=-2.758;DP=392;FS=2.243;HRun=15;HaplotypeScore=50.5209;InbreedingCoeff=0.1942;MQ=70.08;MQ0=3;MQRankSum=-1.235;QD=4.13;ReadPosRankSum=-1.758;VQSLOD=0.2444;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:17,0:19:0.84:1,0,82	0/0:3,0:4:1.94:0,2,6	0/0:21,0:12:13.08:0,13,68	0/0:15,0:8:2.47:0,2,15	1/1:14,0:15:17.59:113,18,0	1/1:8,3:11:5.84:140,6,0	1/1:5,5:10:5.99:51,6,0	0/0:38,0:42:26.08:0,26,143	1/1:2,3:5:3:25,3,0	1/1:5,12:17:4.19:130,4,0	1/1:2,4:6:6.88:52,7,0	1/1:4,9:13:5.94:42,6,0	0/1:12,0:13:4.87:5,0,46	1/1:13,1:14:13.99:156,14,0	0/1:4,5:9:12.01:19,0,12	0/0:15,0:14:8.34:0,8,53	1/1:5,6:11:3.88:27,4,0	1/1:6,8:15:5.45:53,5,0	1/1:18,4:24:10.42:173,10,0	1/1:4,6:10:8.92:64,9,0	0/1:4,2:6:11.96:19,0,12	0/0:4,0:4:2.84:0,3,18	0/0:12,0:13:14.41:0,14,89	0/1:9,0:9:6.14:6,0,59	0/1:4,15:19:21.04:61,0,21	0/1:9,6:16:3.94:102,0,4	0/1:11,19:30:26.90:37,0,27	0/1:3,2:5:24.05:35,0,24
chr10	66575581	.	T	TA	657.43	PASS	AB=0.938;AC=5;AF=0.089;AN=56;BaseQRankSum=-6.390;DP=549;FS=9.339;HRun=10;HaplotypeScore=55.2660;InbreedingCoeff=0.7823;MQ=74.71;MQ0=0;MQRankSum=-0.305;QD=12.17;ReadPosRankSum=0.329;VQSLOD=2.2645;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,23:30:35.51:583,36,0	1/1:1,8:9:18.05:192,18,0	0/0:11,0:11:14.95:0,15,122	0/1:14,0:13:5.54:6,0,96	0/0:15,0:15:35.93:0,36,295	0/0:26,0:26:77.89:0,78,637	0/0:19,0:19:50.94:0,51,419	0/0:24,0:24:62.91:0,63,513	0/0:14,0:14:35.95:0,36,295	0/0:29,0:29:77.89:0,78,640	0/0:11,0:12:31.99:0,32,250	0/0:15,0:15:38.94:0,39,317	0/0:24,0:24:65.86:0,66,531	0/0:22,0:22:62.91:0,63,515	0/0:24,0:24:62.91:0,63,517	0/0:25,0:25:62.88:0,63,510	0/0:19,0:21:52.01:0,52,406	0/0:13,0:13:32.61:0,33,265	0/0:22,0:22:57.78:0,58,463	0/0:18,0:18:53.92:0,54,440	0/0:17,0:17:41.95:0,42,345	0/0:6,0:6:14.98:0,15,123	0/0:22,0:22:62.91:0,63,513	0/0:16,1:17:12.96:0,13,313	0/0:25,0:25:71.91:0,72,589	0/0:27,0:28:73.94:0,74,595	0/0:41,0:41:99:0,102,821	0/0:4,0:5:11.03:0,11,80
chr10	66576084	.	TG	T	15448.93	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=7.722;DP=485;FS=7.141;HRun=1;HaplotypeScore=47.4648;InbreedingCoeff=0.9970;MQ=76.63;MQ0=0;MQRankSum=-3.614;QD=39.21;ReadPosRankSum=5.324;VQSLOD=4.8371;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,23:23:63.21:881,63,0	1/1:0,12:12:30.10:420,30,0	0/0:13,0:13:36.10:0,36,504	0/0:8,0:8:23.99:0,24,318	1/1:0,26:26:78.26:1091,78,0	1/1:0,15:15:45.15:629,45,0	1/1:0,9:9:21.07:294,21,0	0/0:26,0:26:78.25:0,78,1206	1/1:0,13:13:39.13:545,39,0	1/1:0,26:26:78.26:1091,78,0	1/1:0,29:29:84.28:1174,84,0	1/1:0,11:11:30.10:420,30,0	0/0:8,0:8:24.08:0,24,384	1/1:0,15:15:39.13:545,39,0	1/1:0,11:11:30.10:420,30,0	1/1:0,18:18:51.17:713,51,0	1/1:0,20:20:57.19:797,57,0	1/1:0,8:8:24.08:335,24,0	1/1:0,24:24:72.21:973,72,0	1/1:0,30:30:87.29:1216,87,0	1/1:0,10:10:21.07:294,21,0	0/0:13,0:13:39.13:0,39,623	0/0:12,0:12:36.12:0,36,573	0/0:11,0:11:33.10:0,33,494	1/1:0,21:21:60.16:817,60,0	1/1:0,23:23:69.18:914,69,0	1/1:0,34:34:90.30:1253,90,0	1/1:0,16:16:45.15:629,45,0
chr10	66576504	.	G	GGTGTGTGT	7153	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=0.489;DP=585;FS=9.321;HRun=0;HaplotypeScore=194.1474;InbreedingCoeff=0.7648;MQ=60.75;MQ0=4;MQRankSum=-5.321;QD=16.00;ReadPosRankSum=-3.473;VQSLOD=2.7195;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:45.47:0,45,642	0/0:7,0:7:18.04:0,18,331	1/1:21,0:12:1.55:4,2,0	0/0:16,0:11:0.56:0,1,2	1/1:24,0:24:2.97:48,3,0	1/1:19,6:26:12.04:401,12,0	1/1:24,1:25:15.54:255,16,0	1/1:34,0:34:25.40:514,25,0	1/1:17,0:22:24.06:504,24,0	1/1:22,0:22:18.05:357,18,0	1/1:15,3:19:5.77:205,6,0	1/1:12,2:19:9.92:335,10,0	0/0:15,0:15:21.05:0,21,443	1/1:8,1:17:9.01:211,9,0	1/1:19,0:19:24.04:565,24,0	1/1:10,2:15:9.03:316,9,0	1/1:28,2:30:27.04:577,27,0	1/1:11,1:14:9.03:350,9,0	1/1:17,1:17:17.25:322,17,0	1/1:13,5:22:12.01:369,12,0	1/1:21,0:21:9.47:140,9,0	0/0:15,0:16:9.03:0,9,192	0/0:27,0:29:7.73:0,8,558	0/0:19,0:23:30.09:0,30,636	1/1:17,6:25:3.01:120,3,0	1/1:17,2:19:16.59:300,17,0	1/1:19,3:22:29.59:792,30,0	1/1:6,3:10:15.05:468,15,0
chr10	66576542	.	T	TGTGTAC	1077.72	PASS	AB=1.000;AC=22;AF=0.393;AN=56;BaseQRankSum=10.391;DP=461;FS=2.816;HRun=0;HaplotypeScore=127.8113;InbreedingCoeff=-0.5106;MQ=58.26;MQ0=7;MQRankSum=-5.062;QD=3.23;ReadPosRankSum=-0.982;VQSLOD=2.4201;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,99,1511	0/0:8,0:8:24.05:0,24,484	0/0:16,0:7:2.80:0,3,13	0/1:21,0:6:21.16:21,0,30	1/1:1,14:19:2.98:112,3,0	0/1:16,0:16:37.50:38,0,288	0/1:17,0:17:7.20:7,0,234	0/1:26,0:24:7.87:8,0,811	0/1:11,0:11:92.37:105,0,92	0/1:13,0:13:37.81:38,0,289	0/1:16,0:16:15.22:15,0,231	0/1:13,0:13:69.92:93,0,70	0/0:14,0:14:39.06:0,39,668	0/1:14,0:14:99:110,0,165	0/1:19,0:18:34.38:34,0,283	0/1:14,0:14:19.23:19,0,270	0/1:21,0:21:99:140,0,318	0/1:16,0:16:63.17:63,0,395	0/1:22,0:22:3.67:4,0,593	0/1:18,0:18:20.67:21,0,301	0/1:12,0:12:44.56:45,0,163	0/0:15,0:15:36.12:0,36,588	0/0:23,0:23:63.12:0,63,1120	0/0:16,0:16:45.15:0,45,905	0/1:12,0:12:17.03:17,0,231	0/1:10,0:10:14.38:14,0,298	0/1:17,0:17:99:187,0,335	0/1:7,0:7:96.25:143,0,96
chr10	66578773	.	CT	C	642.72	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=0.318;DP=454;FS=13.512;HRun=8;HaplotypeScore=51.2837;InbreedingCoeff=0.7882;MQ=63.99;MQ0=0;MQRankSum=4.527;QD=22.16;ReadPosRankSum=-3.654;VQSLOD=1.6192;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:60.16:0,60,699	0/0:10,0:10:27.08:0,27,323	0/0:16,0:13:29.79:0,30,305	0/0:11,0:9:26.64:0,27,257	0/0:33,0:33:93.20:0,93,1085	0/0:18,0:18:48.14:0,48,570	0/0:10,0:10:27.08:0,27,326	1/1:1,28:29:78.08:737,78,0	0/0:10,0:10:27.08:0,27,326	0/0:22,0:22:57.16:0,57,669	0/0:20,0:20:45.07:0,45,525	0/0:9,0:9:18.06:0,18,217	0/0:15,0:15:42.13:0,42,507	0/0:17,0:17:48.13:0,48,568	0/0:14,0:14:39.06:0,39,435	0/0:17,0:17:45.14:0,45,543	0/0:25,0:25:60.12:0,60,707	0/0:22,0:22:51.12:0,51,600	0/0:6,0:6:9.03:0,9,109	0/0:27,0:27:54.39:0,54,866	0/0:4,0:4:9.03:0,9,109	0/0:3,0:3:6.02:0,6,72	0/0:14,0:14:36.11:0,36,433	0/0:6,0:6:12.04:0,12,145	0/0:20,0:20:57.09:0,57,648	0/0:24,0:24:60.14:0,60,690	0/0:12,0:12:33.07:0,33,373	0/0:13,0:13:33.10:0,33,399
chr10	66580084	.	T	TA	1059.86	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-7.058;DP=277;FS=18.779;HRun=11;HaplotypeScore=33.2152;InbreedingCoeff=0.7093;MQ=73.12;MQ0=8;MQRankSum=-3.036;QD=22.08;ReadPosRankSum=-1.423;VQSLOD=2.2325;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,12:14:38.75:377,39,0	1/1:0,3:3:9.02:91,9,0	0/0:15,0:12:6.19:0,6,117	0/0:10,0:4:5.36:0,5,33	0/0:10,0:10:26.89:0,27,209	0/0:10,0:10:26.89:0,27,209	0/0:6,0:6:11.94:0,12,93	1/1:5,26:30:58.75:727,59,0	0/0:4,0:4:5.97:0,6,46	0/0:9,0:9:23.91:0,24,186	0/0:12,0:11:26.87:0,27,205	0/0:5,0:5:14.93:0,15,114	0/0:7,0:7:20.91:0,21,160	0/0:5,0:6:13.99:0,14,99	0/0:8,0:8:23.91:0,24,186	0/0:9,0:9:26.90:0,27,209	0/0:22,0:22:52.28:0,52,427	0/0:16,0:16:41.81:0,42,322	0/0:15,1:15:5.37:0,5,220	0/0:7,0:8:20.58:0,21,149	0/0:4,0:3:5.98:0,6,46	0/0:3,0:3:8.96:0,9,68	0/0:4,0:4:2.97:0,3,23	0/0:5,0:5:14.94:0,15,116	0/0:7,0:8:16.95:0,17,120	0/0:16,0:16:44.78:0,45,343	0/0:12,0:11:26.88:0,27,209	0/0:3,0:3:8.97:0,9,70
chr10	66581601	.	ATTTTAGAC	A	504.19	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.661;DP=591;FS=14.209;HRun=0;HaplotypeScore=144.8329;InbreedingCoeff=0.9946;MQ=89.78;MQ0=1;MQRankSum=-1.868;QD=33.61;ReadPosRankSum=-2.583;VQSLOD=2.2453;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:93.32:0,93,4116	0/0:18,0:18:48.16:0,48,2128	0/0:22,0:22:23.41:0,23,1820	0/0:23,0:23:60.16:0,60,2304	0/0:33,0:33:99:0,99,4243	0/0:22,0:22:66.23:0,66,2863	0/0:12,0:12:36.12:0,36,1587	1/1:7,8:15:24.06:598,24,0	0/0:21,0:21:63.22:0,63,2786	0/0:25,0:25:69.23:0,69,2733	0/0:24,0:24:72.25:0,72,3126	0/0:22,0:22:63.22:0,63,2788	0/0:17,0:17:48.16:0,48,2002	0/0:15,0:15:39.13:0,39,1719	0/0:19,0:19:51.18:0,51,2261	0/0:12,0:12:33.11:0,33,1439	0/0:11,0:11:30.08:0,30,1218	0/0:15,0:15:45.15:0,45,1952	0/0:20,0:20:60.18:0,60,2550	0/0:38,0:38:99:0,111,4627	0/0:19,0:19:57.20:0,57,2527	0/0:18,0:18:54.19:0,54,2371	0/0:20,0:20:57.20:0,57,2377	0/0:16,0:15:39.09:0,39,1605	0/0:17,0:17:51.18:0,51,2186	0/0:27,0:27:81.28:0,81,3396	0/0:32,0:32:93.32:0,93,3950	0/0:27,0:27:78.27:0,78,3458
chr10	66582271	.	TCAG	T	830.48	PASS	AB=0.809;AC=15;AF=0.268;AN=56;BaseQRankSum=3.175;DP=488;FS=6.266;HRun=0;HaplotypeScore=72.7966;InbreedingCoeff=-0.3691;MQ=62.81;MQ0=11;MQRankSum=-7.801;QD=3.45;ReadPosRankSum=-5.091;VQSLOD=-0.6589;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,4:26:69.20:0,69,1215	0/0:3,1:3:5.94:0,6,115	0/0:31,0:12:32.14:0,32,452	0/0:25,0:11:21.96:0,22,248	0/0:28,0:27:56.82:0,57,1141	0/1:9,4:12:74.38:74,0,400	0/1:9,0:10:16.45:16,0,476	0/1:38,3:40:66.25:66,0,1383	0/1:7,3:10:26.71:27,0,332	0/1:14,8:18:99:206,0,569	0/1:10,4:13:20.73:21,0,495	0/1:11,1:11:20.46:20,0,540	0/0:16,0:16:39.04:0,39,636	0/1:8,1:9:26.07:26,0,428	0/0:9,0:8:21.07:0,21,415	0/1:10,3:11:21.63:22,0,511	0/0:13,2:15:29.13:0,29,526	0/1:5,2:7:84.66:85,0,102	0/1:14,8:20:99:165,0,504	0/0:20,4:22:32.26:0,32,980	0/0:5,1:6:15.05:0,15,289	0/0:20,0:19:51.17:0,51,909	0/0:19,0:19:44.33:0,44,760	0/0:18,0:18:50.27:0,50,750	0/1:18,3:18:79.81:80,0,713	0/1:13,6:15:16.10:16,0,610	0/1:13,5:17:10.73:11,0,702	0/1:5,4:8:99:153,0,196
chr10	66582493	.	T	TTGTGTGTGTG	5810.53	PASS	AC=42;AF=0.778;AN=54;BaseQRankSum=-0.812;DP=587;FS=1.434;HRun=0;HaplotypeScore=185.3341;InbreedingCoeff=0.7450;MQ=49.96;MQ0=27;MQRankSum=-4.686;QD=14.56;ReadPosRankSum=-4.063;VQSLOD=3.2413;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:33,0:32:2.60:23,3,0	1/1:8,0:8:5.95:62,6,0	./.	0/0:47,0:16:2.96:0,3,81	0/0:9,0:20:24.08:0,24,456	1/1:19,0:20:18.38:295,18,0	1/1:26,0:24:16.61:354,17,0	1/1:38,0:38:42.05:754,42,0	1/1:13,0:12:9:126,9,0	1/1:17,0:16:9.03:172,9,0	1/1:10,0:10:6.96:142,7,0	1/1:13,0:13:5.15:90,5,0	0/0:9,0:10:9.03:0,9,220	1/1:9,0:9:9.03:274,9,0	1/1:4,4:10:6.02:227,6,0	1/1:12,1:13:12.04:409,12,0	1/1:25,2:27:28.49:514,28,0	1/1:15,0:15:21.05:403,21,0	1/1:25,0:21:15.01:224,15,0	1/1:6,6:12:3.01:99,3,0	1/1:31,0:31:14.59:275,15,0	0/0:11,0:12:21.01:0,21,398	0/0:18,0:19:24.07:0,24,608	0/0:39,0:42:60.17:0,60,1554	1/1:13,3:19:12.04:347,12,0	1/1:16,1:28:21.49:488,21,0	1/1:16,0:15:13.58:325,14,0	1/1:11,0:12:13.62:209,14,0
chr10	66582834	.	TG	T	17752.19	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=7.441;DP=634;FS=0.000;HRun=1;HaplotypeScore=64.5163;InbreedingCoeff=0.9979;MQ=65.99;MQ0=0;MQRankSum=-1.211;QD=38.76;ReadPosRankSum=3.947;VQSLOD=5.3592;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,35:35:99:1468,105,0	1/1:0,7:7:21.07:293,21,0	0/0:20,0:20:60.16:0,60,862	0/0:21,0:21:57.15:0,57,839	0/0:22,0:22:63.20:0,63,976	1/1:0,29:29:81.27:1133,81,0	1/1:0,22:22:57.19:797,57,0	0/0:18,0:18:54.18:0,54,856	1/1:0,20:20:57.19:797,57,0	1/1:0,26:26:78.23:1055,78,0	1/1:0,18:18:51.08:688,51,0	1/1:0,20:20:54.18:755,54,0	0/0:23,0:23:66.21:0,66,1032	1/1:0,16:16:45.15:629,45,0	1/1:0,35:35:93.31:1299,93,0	1/1:0,25:25:63.21:880,63,0	1/1:0,31:31:93.31:1300,93,0	1/1:3,21:24:38.46:850,38,0	1/1:0,17:17:51.17:713,51,0	1/1:0,22:22:60.17:818,60,0	1/1:0,29:29:81.27:1132,81,0	0/0:25,0:25:75.23:0,75,1140	0/0:21,0:21:63.12:0,63,952	0/0:26,0:26:72.25:0,72,1151	1/1:0,13:13:39.13:545,39,0	1/1:0,26:26:78.24:1070,78,0	1/1:0,34:34:93.27:1278,93,0	1/1:0,9:9:18.06:251,18,0
chr10	66583150	.	CAG	C	20000.74	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=12.326;DP=685;FS=0.000;HRun=0;HaplotypeScore=87.9110;InbreedingCoeff=0.9941;MQ=85.25;MQ0=0;MQRankSum=-5.856;QD=40.24;ReadPosRankSum=5.296;VQSLOD=6.8240;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,45:45:99:1837,120,0	1/1:0,8:8:21.07:321,21,0	0/0:12,0:12:36.10:0,36,637	0/0:31,0:31:84.16:0,84,1471	0/0:28,0:28:84.27:0,84,1588	1/1:0,27:27:69.23:1056,69,0	1/1:0,19:19:54.18:826,54,0	0/0:28,0:28:78.26:0,78,1476	1/1:1,30:31:72.24:1102,72,0	1/1:0,15:15:42.11:597,42,0	1/1:0,18:18:51.17:781,51,0	1/1:0,29:29:84.29:1286,84,0	0/0:18,0:18:54.17:0,54,1009	1/1:0,32:32:90.31:1377,90,0	1/1:1,25:26:75.25:1148,75,0	1/1:0,27:27:69.06:1057,69,0	1/1:1,36:37:38.38:1364,38,0	1/1:0,33:33:87.30:1332,87,0	1/1:2,14:16:39.09:552,39,0	1/1:0,19:19:51.17:772,51,0	1/1:0,32:32:90.31:1378,90,0	0/0:23,0:23:66.23:0,66,1274	0/0:18,0:18:54.19:0,54,1034	0/0:30,0:30:90.31:0,90,1727	1/1:0,17:17:45.15:689,45,0	1/1:1,23:24:69.21:1012,69,0	1/1:1,35:36:87.13:1331,87,0	1/1:1,5:6:12.04:184,12,0
chr10	66585754	.	G	GA	730.90	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-7.094;DP=579;FS=4.368;HRun=4;HaplotypeScore=53.1660;InbreedingCoeff=0.9766;MQ=82.11;MQ0=0;MQRankSum=0.060;QD=30.45;ReadPosRankSum=-3.959;VQSLOD=1.9545;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:75.19:0,75,833	0/0:5,0:5:15.04:0,15,170	0/0:20,0:20:44.91:0,45,488	0/0:15,0:14:42.05:0,42,450	0/0:30,0:30:81.21:0,81,909	0/0:33,0:33:96.25:0,96,1077	0/0:19,0:19:57.16:0,57,646	1/1:3,21:24:63.17:826,63,0	0/0:16,0:16:45.13:0,45,510	0/0:20,0:20:57.16:0,57,646	0/0:28,0:28:81.23:0,81,919	0/0:17,0:17:48.14:0,48,545	0/0:16,0:16:48.12:0,48,535	0/0:15,0:15:45.13:0,45,510	0/0:18,0:18:39.11:0,39,442	0/0:17,0:16:48.14:0,48,544	0/0:25,0:25:69.20:0,69,782	0/0:7,0:7:18.05:0,18,204	0/0:18,0:18:45.12:0,45,503	0/0:28,0:28:78.21:0,78,875	0/0:18,0:18:51.13:0,51,567	0/0:19,0:19:54.15:0,54,613	0/0:20,0:20:57.16:0,57,646	0/0:18,0:18:51.15:0,51,579	0/0:25,0:25:75.14:0,75,816	0/0:38,0:38:99:0,105,1183	0/0:29,0:29:78.21:0,78,874	0/0:16,0:16:42.07:0,42,451
chr10	66587412	.	CA	C	1279.64	PASS	AB=0.775;AC=32;AF=0.571;AN=56;BaseQRankSum=0.389;DP=468;FS=0.546;HRun=17;HaplotypeScore=64.4696;InbreedingCoeff=-0.0394;MQ=52.57;MQ0=18;MQRankSum=2.029;QD=3.34;ReadPosRankSum=4.243;VQSLOD=-0.4921;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:16:26.73:0,27,139	0/0:6,0:9:9.51:0,10,49	0/1:8,2:5:13.58:19,0,14	0/0:10,0:3:5.92:0,6,41	0/0:19,1:33:25.18:0,25,296	0/1:6,7:16:17.54:72,0,18	1/1:4,12:19:29.33:151,29,0	0/1:20,3:25:27.21:27,0,55	1/1:2,7:10:4.75:23,5,0	1/1:13,8:21:28.56:147,29,0	1/1:11,4:16:8.26:44,8,0	1/1:9,6:16:5.52:33,6,0	0/1:7,1:9:4.84:5,0,54	1/1:8,1:10:11.16:66,11,0	0/1:8,8:16:20.70:86,0,21	1/1:5,5:10:14.51:81,15,0	0/1:14,11:26:2.20:66,0,2	0/1:9,2:9:11.51:38,0,12	0/1:9,4:13:16.47:63,0,16	0/1:8,2:9:26.40:43,0,26	0/1:11,8:17:16.14:90,0,16	0/0:10,0:12:11.20:0,11,114	0/1:19,1:23:24.23:24,0,143	0/1:13,1:11:1.80:2,0,71	1/1:7,7:18:2.59:93,3,0	0/1:13,6:21:40.42:54,0,40	0/1:13,9:26:58.02:94,0,58	1/1:7,10:16:7.32:132,7,0
chr10	66589750	.	GCGCGTGCA	G	65.10	PASS	AB=0.857;AC=2;AF=0.036;AN=56;BaseQRankSum=1.253;DP=581;FS=16.246;HRun=0;HaplotypeScore=183.1976;InbreedingCoeff=-0.0317;MQ=67.90;MQ0=2;MQRankSum=0.182;QD=2.96;ReadPosRankSum=-2.803;VQSLOD=1.0538;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:95.29:0,95,1334	0/0:10,0:10:15.05:0,15,253	0/1:7,0:4:3:3,0,58	0/0:19,0:13:17.78:0,18,188	0/0:14,0:14:27.07:0,27,442	0/0:19,0:19:48.14:0,48,779	0/0:24,0:24:54.08:0,54,846	0/1:9,6:15:99:139,0,338	0/0:15,0:15:36.08:0,36,558	0/0:19,0:19:57.15:0,57,926	0/0:20,0:20:48.09:0,48,751	0/0:18,0:18:36.11:0,36,588	0/0:16,0:16:48.16:0,48,1322	0/0:21,0:21:60.20:0,60,991	0/0:20,0:20:45.12:0,45,722	0/0:17,0:17:45.09:0,45,749	0/0:36,0:36:93.08:0,93,1325	0/0:21,0:21:54.03:0,54,893	0/0:18,0:18:51.59:0,52,844	0/0:11,0:11:30.08:0,30,471	0/0:56,0:56:99:0,144,2087	0/0:10,0:10:30.08:0,30,944	0/0:10,0:10:30.06:0,30,783	0/0:36,0:36:99:0,102,3096	0/0:27,0:27:63.22:0,63,1064	0/0:21,0:21:63.14:0,63,920	0/0:16,0:16:42.14:0,42,667	0/0:21,0:21:57.19:0,57,970
chr10	66589758	.	ATGCG	A	11254.53	PASS	AB=1.000;AC=43;AF=0.796;AN=54;BaseQRankSum=7.892;DP=570;FS=2.626;HRun=0;HaplotypeScore=101.9061;InbreedingCoeff=0.8691;MQ=66.34;MQ0=3;MQRankSum=0.327;QD=24.10;ReadPosRankSum=3.212;VQSLOD=4.8881;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,35:41:57.19:951,57,0	1/1:4,7:11:6.02:100,6,0	./.	0/0:25,0:15:8.52:0,9,133	1/1:4,9:13:12.04:200,12,0	1/1:3,15:18:33.11:551,33,0	1/1:7,18:25:26.92:415,27,0	0/1:14,0:14:3.71:4,0,82	1/1:2,13:15:27.09:451,27,0	1/1:4,14:18:42.12:649,42,0	1/1:3,19:22:36.12:601,36,0	1/1:4,13:18:24.01:401,24,0	0/0:17,0:17:36.07:0,36,747	1/1:4,17:21:48.16:802,48,0	1/1:6,14:20:24.08:401,24,0	1/1:7,9:16:24.08:401,24,0	1/1:8,22:30:45.15:752,45,0	1/1:4,17:21:36.12:601,36,0	1/1:9,10:18:32.68:315,33,0	1/1:4,8:12:12.04:201,12,0	1/1:19,28:47:57.19:948,57,0	0/0:9,0:9:21.06:0,21,430	0/0:10,0:10:18.02:0,18,357	0/0:34,0:34:63.22:0,63,1480	1/1:7,20:27:41.97:702,42,0	1/1:6,14:20:39.02:554,39,0	1/1:3,13:16:33.03:551,33,0	1/1:5,18:23:42.14:702,42,0
chr10	66589987	.	TC	T	1500.83	PASS	AB=0.948;AC=51;AF=0.911;AN=56;BaseQRankSum=-1.294;DP=377;FS=0.000;HRun=13;HaplotypeScore=49.5776;InbreedingCoeff=-0.0730;MQ=77.83;MQ0=0;MQRankSum=-1.412;QD=3.98;ReadPosRankSum=2.655;VQSLOD=-0.2425;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,1:11:10.89:67,11,0	1/1:3,0:3:5.69:30,6,0	0/1:15,0:12:17.58:18,0,46	0/1:13,0:10:17.37:17,0,23	1/1:10,6:16:8.70:53,9,0	1/1:5,7:12:8.93:66,9,0	1/1:8,7:15:8.80:60,9,0	1/1:13,1:21:17.04:53,17,0	1/1:7,5:12:8.92:66,9,0	1/1:9,0:9:2.96:22,3,0	1/1:16,0:20:5.57:62,6,0	1/1:10,5:15:2.86:16,3,0	0/1:9,0:9:7.42:7,0,48	1/1:14,2:16:25.75:161,26,0	1/1:17,2:20:20.53:208,21,0	1/1:11,12:25:7.94:147,8,0	1/1:4,7:11:2.96:22,3,0	1/1:4,6:11:10.91:68,11,0	1/1:6,0:6:1.20:3,1,0	1/1:10,4:15:11.82:82,12,0	1/1:9,0:10:7.94:45,8,0	1/1:6,1:7:2.75:13,3,0	1/1:5,2:13:8.20:44,8,0	0/1:14,1:15:20.34:35,0,20	1/1:10,5:23:10.82:66,11,0	1/1:8,2:10:5.93:44,6,0	1/1:9,6:16:14.87:109,15,0	0/1:6,0:8:7.78:38,0,8
chr10	66590334	.	TGTC	T	19471.59	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=12.295;DP=647;FS=7.025;HRun=0;HaplotypeScore=105.4378;InbreedingCoeff=0.9968;MQ=86.79;MQ0=0;MQRankSum=-7.118;QD=40.15;ReadPosRankSum=5.780;VQSLOD=5.9309;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,13:15:27.09:450,27,0	1/1:0,7:7:18.06:296,18,0	0/0:25,0:25:63.21:0,63,1241	0/0:25,0:24:60.15:0,60,1219	1/1:1,32:33:63.22:1049,63,0	1/1:3,24:27:63.22:1049,63,0	1/1:0,19:19:48.16:799,48,0	0/0:35,0:35:93.31:0,93,2035	1/1:1,23:24:57.19:949,57,0	1/1:2,22:24:66.21:1067,66,0	1/1:2,32:34:81.28:1349,81,0	1/1:1,18:19:51.17:849,51,0	0/0:24,0:24:72.25:0,72,1630	1/1:2,22:24:63.22:1049,63,0	1/1:1,35:36:81.28:1349,81,0	1/1:0,13:13:36.12:600,36,0	1/1:1,23:24:51.17:845,51,0	1/1:1,7:8:18.06:300,18,0	1/1:2,19:21:57.17:894,57,0	1/1:4,22:26:57.19:945,57,0	1/1:0,14:14:36.12:600,36,0	0/0:24,0:24:72.25:0,72,1590	0/0:17,0:17:48.15:0,48,1043	0/0:12,0:12:36.12:0,36,815	1/1:0,26:27:63.22:1049,63,0	1/1:0,25:25:75.26:1240,75,0	1/1:2,31:33:90.31:1495,90,0	1/1:4,28:32:75.26:1249,75,0
chr10	66591308	.	CT	C	7354.81	PASS	AB=0.821;AC=43;AF=0.768;AN=56;BaseQRankSum=6.768;DP=598;FS=11.329;HRun=12;HaplotypeScore=90.2438;InbreedingCoeff=0.5933;MQ=75.13;MQ0=0;MQRankSum=-0.470;QD=14.34;ReadPosRankSum=5.689;VQSLOD=4.1913;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,13:21:34.85:261,35,0	0/1:3,7:10:23.11:136,0,23	0/1:30,0:21:3.28:3,0,178	0/1:18,0:12:15.92:16,0,76	1/1:4,26:30:71.70:557,72,0	1/1:5,21:27:58.80:447,59,0	1/1:3,18:21:44.82:348,45,0	0/0:33,3:38:55.25:0,55,871	1/1:4,16:21:40.88:308,41,0	1/1:3,26:32:83.79:619,84,0	1/1:2,21:24:58.78:445,59,0	1/1:8,12:20:29.81:232,30,0	0/0:26,1:28:48.59:0,49,638	1/1:6,14:20:32.84:255,33,0	1/1:5,14:19:29.86:232,30,0	1/1:5,25:31:64.61:493,65,0	0/1:2,9:11:3.54:159,0,4	1/1:0,11:11:23.66:185,24,0	1/1:4,24:29:70.70:531,71,0	1/1:4,20:24:56.75:440,57,0	1/1:4,7:11:23.71:175,24,0	0/0:9,0:9:21.04:0,21,212	0/0:9,0:10:17.87:0,18,166	0/1:11,0:11:4.44:4,0,134	1/1:7,13:21:37.87:284,38,0	1/1:1,25:26:74.71:580,75,0	1/1:11,15:26:38.80:302,39,0	1/1:2,16:18:20.36:340,20,0
chr10	66592105	.	ATT	A	191.03	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=3.409;DP=464;FS=6.684;HRun=12;HaplotypeScore=55.7012;InbreedingCoeff=0.9341;MQ=62.37;MQ0=3;MQRankSum=-1.413;QD=11.24;ReadPosRankSum=1.886;VQSLOD=1.4670;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,9:12:17.97:183,18,0	1/1:1,4:5:12.02:122,12,0	0/0:31,1:12:8.96:0,9,90	0/0:20,0:13:19.10:0,19,244	0/0:26,0:28:68.71:0,69,973	0/0:14,0:14:42.14:0,42,625	0/0:8,0:10:29.58:0,30,394	0/0:29,0:30:65.70:0,66,921	0/0:15,0:15:38.55:0,39,455	0/0:25,0:25:63.19:0,63,879	0/0:15,0:17:47.12:0,47,624	0/0:11,0:12:32.60:0,33,456	0/0:12,0:12:27.08:0,27,383	0/0:11,0:11:33.11:0,33,493	0/0:11,0:12:35.61:0,36,500	0/0:11,0:12:29.59:0,30,412	0/0:19,0:19:51.10:0,51,708	0/0:19,0:21:41.04:0,41,506	0/0:22,0:21:42.10:0,42,554	0/0:19,0:18:45.15:0,45,669	0/0:12,0:12:30.10:0,30,447	0/0:10,0:10:27.08:0,27,383	0/0:17,0:18:51.17:0,51,738	0/0:7,0:7:21.07:0,21,313	0/0:19,0:19:48.16:0,48,716	0/0:19,0:19:51.14:0,51,720	0/0:21,0:23:56.63:0,57,777	0/0:5,0:6:14.54:0,15,188
chr10	66592279	.	C	CGAGA	619.63	PASS	AB=0.980;AC=21;AF=0.375;AN=56;BaseQRankSum=8.690;DP=361;FS=29.439;HRun=0;HaplotypeScore=83.0949;InbreedingCoeff=-0.2838;MQ=64.21;MQ0=4;MQRankSum=0.002;QD=2.72;ReadPosRankSum=-0.995;VQSLOD=0.0740;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:10,1:11:3.68:182,4,0	0/1:3,0:3:0.19:20,0,0	0/0:16,0:9:9.13:0,9,199	0/0:21,0:8:2.55:0,3,88	0/0:14,0:14:22.43:0,22,248	0/1:10,0:10:14.05:14,0,44	0/1:7,0:7:5.76:6,0,183	0/1:21,0:20:7.73:8,0,742	0/1:12,0:11:13.87:14,0,276	0/1:17,0:17:43.20:43,0,477	0/0:17,0:17:24.52:0,25,372	0/1:10,0:10:37.30:37,0,175	0/0:5,0:5:15.05:0,15,289	1/1:7,0:7:3.01:35,3,0	0/1:9,0:9:56.24:56,0,126	0/1:9,0:10:55.02:55,0,61	0/1:12,0:12:12.98:13,0,269	0/1:12,0:11:18.87:19,0,144	0/1:17,0:17:99:129,0,420	0/1:16,0:16:33.78:34,0,250	0/1:8,0:8:32.61:33,0,124	0/0:5,0:5:15.04:0,15,238	0/0:12,0:12:36.07:0,36,520	0/0:17,0:17:30.05:0,30,408	0/1:18,0:18:8.62:9,0,183	0/1:14,1:21:67.56:68,0,547	0/0:26,0:26:22.72:0,23,677	0/1:7,0:7:0.97:1,0,157
chr10	66592280	.	T	TAGAGAG	5150.16	PASS	AB=0.846;AC=41;AF=0.820;AN=50;BaseQRankSum=-2.632;DP=419;FS=0.000;HRun=0;HaplotypeScore=112.7983;InbreedingCoeff=0.5801;MQ=61.20;MQ0=4;MQRankSum=-2.798;QD=15.24;ReadPosRankSum=-2.040;VQSLOD=3.7492;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:13:12:185,12,0	./.	./.	./.	1/1:13,0:13:6.02:129,6,0	1/1:10,0:13:3.01:78,3,0	1/1:8,0:9:5.97:128,6,0	1/1:26,0:25:33.02:550,33,0	1/1:13,1:13:9.03:239,9,0	1/1:19,0:19:17.98:326,18,0	0/1:18,4:22:0:0,0,0	1/1:12,0:12:15.01:214,15,0	0/0:5,0:5:9.03:0,9,182	1/1:10,0:10:6:61,6,0	1/1:4,3:12:11.18:326,11,0	1/1:6,0:10:9.03:166,9,0	1/1:12,4:18:12.04:322,12,0	1/1:7,6:16:6.02:135,6,0	1/1:16,1:18:24.08:607,24,0	1/1:10,7:18:9.03:254,9,0	1/1:10,0:10:3.01:70,3,0	0/0:5,0:5:3.01:0,3,61	0/0:9,0:12:7.79:0,8,106	0/0:9,0:18:6.55:0,7,68	1/1:23,0:23:9.03:181,9,0	1/1:22,1:23:36.10:763,36,0	1/1:24,1:28:11.85:265,12,0	1/1:6,2:8:6.02:153,6,0
chr10	66596486	.	C	CTGTGTG	5031.32	PASS	AB=0.895;AC=38;AF=0.760;AN=50;BaseQRankSum=-2.603;DP=743;FS=0.671;HRun=0;HaplotypeScore=188.4422;InbreedingCoeff=-0.0104;MQ=58.08;MQ0=3;MQRankSum=-1.043;QD=7.80;ReadPosRankSum=-0.221;VQSLOD=3.6827;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:34:1.82:0,2,134	0/0:7,0:7:3.01:0,3,43	./.	./.	1/1:22,0:32:4.68:135,5,0	1/1:29,0:29:26.16:407,26,0	1/1:21,0:33:7.06:149,7,0	0/1:39,0:39:2.23:29,0,2	1/1:28,0:28:18.38:255,18,0	1/1:45,0:45:63.52:762,64,0	./.	1/1:20,0:32:11.85:152,12,0	0/1:24,0:26:25:25,0,83	1/1:16,1:23:11.97:213,12,0	0/1:15,11:32:9.17:126,0,9	1/1:21,9:36:9.50:231,10,0	0/1:20,0:26:10.31:189,0,10	1/1:12,0:13:11.98:126,12,0	1/1:18,0:18:17.29:150,17,0	0/1:10,8:18:2.82:274,0,3	1/1:38,0:38:0.98:347,1,0	0/1:20,0:21:12.98:13,0,251	0/1:24,0:24:17.84:18,0,116	0/1:45,0:46:83.53:84,0,461	1/1:9,0:24:8.57:158,9,0	1/1:9,13:24:38.79:577,39,0	1/1:23,0:22:20:287,20,0	1/1:12,0:12:15.03:326,15,0
chr10	66597255	.	GGGT	G	2226.94	PASS	AB=1.000;AC=41;AF=0.732;AN=56;BaseQRankSum=4.506;DP=414;FS=3.809;HRun=0;HaplotypeScore=82.8940;InbreedingCoeff=0.6479;MQ=70.74;MQ0=9;MQRankSum=-4.402;QD=8.01;ReadPosRankSum=3.565;VQSLOD=1.8624;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,15:17:30.10:510,30,0	1/1:0,6:6:12.04:183,12,0	0/0:47,0:17:47.93:0,48,757	0/0:33,0:14:20.19:0,20,330	1/1:15,0:15:27.93:152,28,0	0/1:9,0:9:6.77:72,0,7	1/1:8,1:9:13.72:92,14,0	1/1:23,0:23:7.92:128,8,0	1/1:5,0:5:8.15:35,8,0	1/1:12,0:12:11.36:95,11,0	1/1:16,0:16:17.15:91,17,0	1/1:15,0:15:26.51:110,27,0	0/0:15,0:15:33.11:0,33,630	1/1:6,0:6:5.56:30,6,0	1/1:9,0:9:21.95:111,22,0	1/1:17,1:17:12.78:116,13,0	1/1:30,0:30:0.38:128,0,0	1/1:10,0:8:16.40:85,16,0	1/1:8,0:7:4.21:40,4,0	0/1:8,0:8:1.58:57,0,2	1/1:5,0:5:8.03:33,8,0	0/0:12,0:12:33.11:0,33,644	0/0:18,0:18:45.14:0,45,880	0/0:11,0:11:30.10:0,30,604	1/1:17,0:17:20.25:88,20,0	1/1:16,0:15:28.73:131,29,0	1/1:19,0:18:23.61:115,24,0	0/1:5,0:5:13.52:14,0,21
chr10	66597256	.	GGT	G	6478.30	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=1.555;DP=409;FS=7.740;HRun=0;HaplotypeScore=62.8259;InbreedingCoeff=0.8861;MQ=71.18;MQ0=8;MQRankSum=-3.938;QD=23.39;ReadPosRankSum=3.304;VQSLOD=5.1271;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:17:29.93:237,30,0	1/1:6,0:6:11.02:80,11,0	0/0:44,0:17:46.58:0,47,557	0/0:31,0:14:25.68:0,26,276	1/1:5,10:15:30.04:411,30,0	1/1:6,5:11:17.78:319,18,0	1/1:3,5:8:15.04:210,15,0	1/1:23,0:23:31.25:199,31,0	1/1:2,3:5:9.03:137,9,0	1/1:8,4:12:26.96:320,27,0	1/1:13,3:16:29.99:338,30,0	1/1:5,10:15:30.03:429,30,0	0/0:15,0:15:36.08:0,36,526	1/1:3,3:6:6.02:87,6,0	1/1:6,4:10:27.02:341,27,0	1/1:7,9:15:41.16:491,41,0	1/1:5,25:30:27.05:578,27,0	1/1:2,8:8:18.06:274,18,0	1/1:3,5:8:18.03:231,18,0	1/1:7,1:8:11.74:105,12,0	1/1:1,4:5:9.03:137,9,0	0/0:12,0:12:33.03:0,33,492	0/0:18,0:18:45.13:0,45,715	0/0:11,0:11:30.10:0,30,513	1/1:3,14:17:30.56:429,31,0	1/1:3,13:15:33.10:476,33,0	1/1:3,15:18:39.11:532,39,0	1/1:5,0:5:0.13:118,0,0
chr10	66597257	.	GT	G	4071.12	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=5.126;DP=399;FS=12.842;HRun=1;HaplotypeScore=65.8489;InbreedingCoeff=0.9307;MQ=74.96;MQ0=8;MQRankSum=-5.405;QD=15.36;ReadPosRankSum=3.187;VQSLOD=2.1835;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,1:16:29.42:178,29,0	1/1:6,0:6:11.82:76,12,0	0/0:44,0:18:45.11:0,45,459	0/0:33,1:16:18.71:0,19,215	1/1:11,3:14:29.72:210,30,0	1/1:10,1:11:27.37:240,27,0	1/1:6,1:7:14.86:109,15,0	1/1:5,17:22:41.80:366,42,0	1/1:4,0:4:8.92:61,9,0	1/1:9,2:11:26.75:199,27,0	1/1:15,1:16:29.24:262,29,0	1/1:12,3:15:29.76:218,30,0	0/0:16,0:16:35.86:0,36,423	1/1:4,2:6:5.99:50,6,0	1/1:8,2:10:26.83:209,27,0	1/1:14,2:15:41.14:331,41,0	1/1:26,2:28:40.01:276,40,0	1/1:8,1:7:17.87:129,18,0	1/1:5,2:6:17.84:126,18,0	1/1:2,5:7:14.88:111,15,0	1/1:4,1:5:8.92:63,9,0	0/0:12,0:12:32.90:0,33,380	0/0:18,0:18:45.11:0,45,565	0/0:10,0:10:30.10:0,30,413	1/1:14,3:17:30.20:216,30,0	1/1:15,0:14:32.70:242,33,0	1/1:16,2:17:38.60:317,39,0	1/1:3,2:5:11.58:83,12,0
chr10	66597407	.	TATC	T	1712.85	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.021;DP=600;FS=0.605;HRun=0;HaplotypeScore=84.3747;InbreedingCoeff=0.9832;MQ=85.07;MQ0=0;MQRankSum=-2.295;QD=36.44;ReadPosRankSum=-0.078;VQSLOD=4.1870;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,41:42:99:1625,105,0	1/1:0,5:5:12.04:204,12,0	0/0:24,0:24:50.54:0,51,1314	0/0:17,0:16:26.27:0,26,557	0/0:19,0:19:57.17:0,57,1223	0/0:16,0:16:48.15:0,48,1039	0/0:21,0:21:57.20:0,57,1290	0/0:27,0:27:81.24:0,81,1750	0/0:22,0:22:66.18:0,66,1382	0/0:25,0:25:69.23:0,69,1547	0/0:19,0:19:57.17:0,57,1176	0/0:30,0:30:90.30:0,90,2005	0/0:23,0:23:69.24:0,69,1590	0/0:19,0:19:54.16:0,54,1153	0/0:24,0:24:69.24:0,69,1564	0/0:26,0:26:75.24:0,75,1681	0/0:26,0:26:72.23:0,72,1615	0/0:19,0:19:57.20:0,57,1313	0/0:18,0:18:54.17:0,54,1177	0/0:17,0:17:51.15:0,51,1087	0/0:34,0:34:99:0,99,2281	0/0:16,0:16:48.14:0,48,983	0/0:14,0:14:39.12:0,39,854	0/0:24,0:24:66.21:0,66,1475	0/0:18,0:18:51.17:0,51,1153	0/0:26,0:26:78.25:0,78,1688	0/0:16,0:15:45.15:0,45,1005	0/0:13,0:13:39.12:0,39,853
chr10	66598595	.	AGTGTGTGTGTGTGT	A	15653.57	PASS	AB=0.971;AC=41;AF=0.732;AN=56;BaseQRankSum=11.670;DP=723;FS=5.009;HRun=0;HaplotypeScore=250.2012;InbreedingCoeff=0.8154;MQ=56.61;MQ0=23;MQRankSum=-6.516;QD=30.40;ReadPosRankSum=5.437;VQSLOD=3.0784;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:13,17:29:6.02:191,6,0	1/1:4,5:9:9.03:352,9,0	0/0:34,0:17:11.57:0,12,163	0/0:40,0:21:8.99:0,9,76	1/1:7,0:23:22.32:450,22,0	1/1:6,16:22:16.10:711,16,0	1/1:11,18:29:0.52:451,1,0	0/0:33,0:33:73.46:0,73,2855	1/1:10,16:27:26.83:1048,27,0	1/1:12,14:26:32.60:795,33,0	1/1:4,7:11:15.05:535,15,0	1/1:12,25:36:36.12:1428,36,0	0/0:31,0:31:60.15:0,60,2356	1/1:5,19:23:27.02:970,27,0	1/1:12,30:42:51.11:1942,51,0	1/1:14,23:37:33.57:1289,34,0	1/1:19,7:27:31.96:815,32,0	1/1:5,11:16:15.52:556,16,0	1/1:11,13:21:36.16:655,36,0	1/1:3,14:17:26.98:850,27,0	0/1:33,0:32:1.96:238,0,2	0/0:16,0:17:15.52:0,16,932	0/0:13,0:13:24.08:0,24,1271	0/0:38,0:39:94.83:0,95,4898	1/1:6,9:15:14.48:594,14,0	1/1:9,15:27:53.93:1009,54,0	1/1:9,25:34:16.98:708,17,0	1/1:2,0:1:3.01:67,3,0
chr10	66600401	.	A	ACATTGTGAC	60984.82	PASS	AB=0.935;AC=43;AF=0.768;AN=56;BaseQRankSum=-11.066;DP=764;FS=5.326;HRun=0;HaplotypeScore=172.8569;InbreedingCoeff=0.8978;MQ=79.77;MQ0=0;MQRankSum=-19.529;QD=104.61;ReadPosRankSum=6.066;VQSLOD=5.0627;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,20:33:60.21:2841,60,0	1/1:3,5:9:24.08:1159,24,0	0/0:38,0:38:99:0,105,2965	0/0:35,0:35:93.25:0,93,2612	1/1:11,16:27:66.14:2811,66,0	1/1:7,16:24:60.21:2704,60,0	1/1:10,13:29:54.19:2528,54,0	0/0:50,0:50:99:0,141,4084	1/1:7,19:30:75.26:3454,75,0	1/1:10,22:32:93.32:4265,93,0	1/1:2,14:17:42.10:1858,42,0	1/1:10,28:41:99:5135,111,0	0/1:27,1:29:73.22:73,0,1902	1/1:5,20:29:72.25:3427,72,0	1/1:9,29:42:99:5003,108,0	1/1:9,28:40:99:4779,102,0	1/1:5,8:16:30.10:1355,30,0	1/1:5,7:14:33.11:1392,33,0	1/1:13,10:24:62.87:2610,63,0	1/1:5,17:25:63.13:2706,63,0	1/1:14,8:24:36.10:1567,36,0	0/0:17,0:17:51.16:0,51,1450	0/0:21,0:21:51.17:0,51,1421	0/0:20,0:20:57.18:0,57,1608	1/1:9,21:33:81.28:3870,81,0	1/1:8,14:24:66.21:2798,66,0	1/1:12,18:32:81.28:3879,81,0	1/1:4,3:7:18.06:769,18,0
chr10	66600810	.	CCAGAATCAGTCTAT	C	1577.38	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.104;DP=431;FS=1.513;HRun=0;HaplotypeScore=163.5874;InbreedingCoeff=0.9560;MQ=93.79;MQ0=0;MQRankSum=-6.180;QD=58.42;ReadPosRankSum=-0.043;VQSLOD=3.4497;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,11:19:27.09:1066,27,0	1/1:2,6:8:15.05:629,15,0	0/0:21,0:22:52.99:0,53,3114	0/0:17,0:17:41.97:0,42,2128	0/0:16,0:16:48.16:0,48,3045	0/0:10,0:10:30.10:0,30,1724	0/0:23,0:23:63.20:0,63,3641	0/0:8,0:8:21.07:0,21,1357	0/0:14,0:14:39.13:0,39,2644	0/0:13,0:13:39.13:0,39,2377	0/0:8,0:8:21.07:0,21,1360	0/0:17,0:17:51.18:0,51,3045	0/0:21,0:21:63.21:0,63,3633	0/0:10,0:10:27.07:0,27,1559	0/0:15,0:15:42.13:0,42,2589	0/0:20,0:20:54.19:0,54,3469	0/0:19,0:19:51.18:0,51,3322	0/0:23,0:23:66.21:0,66,4188	0/0:16,0:16:42.13:0,42,2322	0/0:15,0:15:33.11:0,33,2307	0/0:30,0:30:84.29:0,84,5476	0/0:12,0:12:33.11:0,33,2085	0/0:15,0:15:42.14:0,42,2799	0/0:17,0:17:45.14:0,45,2293	0/0:11,0:11:24.08:0,24,1658	0/0:15,0:15:45.15:0,45,2686	0/0:14,0:14:42.13:0,42,2587	0/0:3,0:3:9.03:0,9,533
chr10	66600878	.	T	TG	218.96	PASS	AB=0.889;AC=5;AF=0.096;AN=52;BaseQRankSum=1.551;DP=158;FS=4.660;HRun=7;HaplotypeScore=28.9382;InbreedingCoeff=0.1061;MQ=76.90;MQ0=0;MQRankSum=-3.590;QD=7.55;ReadPosRankSum=-0.919;VQSLOD=-0.6109;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,8:10:21.06:254,21,0	./.	0/0:6,0:6:14.06:0,14,121	0/0:10,0:8:5.93:0,6,58	0/1:3,3:6:19.67:63,0,20	0/0:5,0:5:12.02:0,12,116	0/0:6,0:6:12.01:0,12,116	0/0:4,0:4:6:0,6,58	0/1:5,0:5:5.09:5,0,49	0/0:4,0:4:6:0,6,58	0/0:2,0:2:6.01:0,6,58	0/0:9,0:9:1.23:0,1,98	0/0:6,0:6:9.01:0,9,87	0/0:3,0:3:3.48:0,3,30	0/0:5,0:5:0.21:0,0,29	0/0:7,0:7:3.18:0,3,54	0/0:3,0:3:3.89:0,4,31	0/1:8,0:8:3.81:4,0,127	0/0:6,0:6:12.02:0,12,116	0/0:4,0:4:6:0,6,58	0/0:10,0:10:15.02:0,15,145	0/0:8,0:8:18.03:0,18,174	0/0:5,0:5:15.02:0,15,144	0/0:6,0:6:14.97:0,15,135	0/0:2,0:2:6.01:0,6,58	./.	0/0:12,0:12:29.93:0,30,289	0/0:2,0:2:6.01:0,6,58
chr10	66604074	.	ATTT	A	8865.68	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-5.622;DP=498;FS=1.103;HRun=14;HaplotypeScore=99.6523;InbreedingCoeff=0.9871;MQ=66.57;MQ0=0;MQRankSum=-1.310;QD=21.26;ReadPosRankSum=5.141;VQSLOD=4.1064;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,20:28:47.78:543,48,0	1/1:2,7:9:18.02:210,18,0	0/0:12,0:14:35.63:0,36,410	0/0:9,0:7:11.87:0,12,168	1/1:7,11:19:25.56:313,26,0	1/1:1,15:17:37.66:452,38,0	1/1:5,15:20:32.99:386,33,0	1/1:9,0:36:75.12:468,75,0	1/1:2,10:13:23.97:263,24,0	1/1:5,13:19:37.95:442,38,0	1/1:4,8:12:20.95:245,21,0	1/1:8,12:20:38.99:448,39,0	0/0:14,0:22:60:0,60,795	1/1:1,10:11:24.07:280,24,0	1/1:10,16:26:48.06:559,48,0	1/1:5,18:23:54.09:631,54,0	1/1:2,10:12:30.06:337,30,0	1/1:3,15:18:39.02:441,39,0	1/1:7,15:22:41.95:450,42,0	1/1:1,10:12:22.52:277,23,0	1/1:4,15:19:29.96:348,30,0	0/0:3,0:10:23.96:0,24,293	0/0:7,0:15:27.03:0,27,344	0/0:3,0:10:21.06:0,21,299	1/1:9,15:24:41.88:480,42,0	1/1:12,18:30:53.91:620,54,0	1/1:2,13:17:29.88:363,30,0	1/1:2,8:10:27.06:310,27,0
chr10	66604086	.	TTTA	T	2469.55	PASS	AB=0.982;AC=27;AF=0.482;AN=56;BaseQRankSum=1.296;DP=471;FS=4.673;HRun=0;HaplotypeScore=115.5593;InbreedingCoeff=-0.1049;MQ=68.25;MQ0=0;MQRankSum=-0.725;QD=7.04;ReadPosRankSum=12.504;VQSLOD=0.1272;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:24:1.76:185,2,0	0/1:9,0:9:8.67:82,0,9	0/0:17,0:16:48.02:0,48,589	0/0:14,0:12:33.02:0,33,346	0/1:14,0:14:11.48:95,0,11	1/1:18,0:18:0.55:150,1,0	1/1:16,1:17:29.68:133,30,0	0/0:36,0:36:15.33:0,15,161	0/1:14,0:14:41.92:101,0,42	0/1:18,1:19:86.94:133,0,87	0/1:10,1:11:37.34:90,0,37	0/1:15,1:16:6.54:155,0,7	0/0:21,0:21:50.09:0,50,622	1/1:11,0:11:7.26:109,7,0	0/1:22,2:24:55.32:165,0,55	1/1:19,0:19:26.66:195,27,0	0/1:15,0:15:54:88,0,54	0/1:18,0:18:22.45:104,0,22	0/1:20,0:20:60.08:145,0,60	0/1:15,0:15:44.06:85,0,44	0/1:20,0:20:71.14:116,0,71	0/0:10,0:10:20.65:0,21,289	0/0:11,0:11:21.95:0,22,300	0/0:11,0:10:24:0,24,362	0/1:18,0:18:12.58:135,0,13	0/1:23,0:23:40.76:116,0,41	0/1:16,0:16:1.09:113,0,1	1/1:9,1:10:5.53:147,6,0
chr10	66604119	.	GGT	G	2902.04	PASS	AB=0.752;AC=33;AF=0.635;AN=52;BaseQRankSum=2.230;DP=457;FS=3.133;HRun=0;HaplotypeScore=89.0378;InbreedingCoeff=0.6489;MQ=60.73;MQ0=4;MQRankSum=1.438;QD=9.64;ReadPosRankSum=2.755;VQSLOD=3.3521;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:28:33.03:0,33,338	0/0:5,0:7:12:0,12,120	./.	./.	0/0:9,0:10:5.99:0,6,50	1/1:13,1:14:6.01:66,6,0	1/1:11,5:16:18.03:189,18,0	0/0:36,0:36:21.97:0,22,157	1/1:11,6:16:18.05:198,18,0	1/1:17,2:18:11.52:112,12,0	1/1:5,5:10:15.04:165,15,0	1/1:15,7:22:27.07:296,27,0	0/0:16,0:16:20.58:0,21,315	1/1:12,3:14:15.02:156,15,0	1/1:15,9:23:35.93:375,36,0	1/1:10,5:15:18.03:188,18,0	0/1:7,5:12:27.01:147,0,27	1/1:11,5:20:31.95:280,32,0	1/1:12,2:15:11.70:94,12,0	1/1:4,2:6:6.02:66,6,0	1/1:28,4:32:13.82:171,14,0	0/0:8,0:8:9.03:0,9,135	0/0:10,0:10:10.57:0,11,176	0/0:15,0:14:24.04:0,24,335	0/1:9,3:12:33.03:87,0,33	1/1:20,5:24:24.05:257,24,0	0/1:10,5:15:24.01:169,0,24	1/1:8,2:10:8.86:80,9,0
chr10	66604476	.	GC	G	2319.50	PASS	AB=0.538;AC=39;AF=0.696;AN=56;BaseQRankSum=-3.354;DP=251;FS=32.776;HRun=9;HaplotypeScore=27.4691;InbreedingCoeff=0.6847;MQ=81.77;MQ0=1;MQRankSum=-0.111;QD=12.02;ReadPosRankSum=2.842;VQSLOD=0.5793;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,8:13:21.40:183,21,0	0/0:3,0:3:2.84:0,3,14	0/0:13,0:8:19.99:0,20,175	0/0:18,0:10:7.80:0,8,61	0/0:1,0:4:8.68:0,9,53	1/1:0,8:8:8.90:82,9,0	1/1:4,7:11:16.05:141,16,0	1/1:7,6:14:19.99:160,20,0	1/1:3,6:9:6.91:102,7,0	1/1:0,2:2:3:27,3,0	1/1:0,4:4:6:54,6,0	1/1:2,14:16:12:110,12,0	0/0:4,0:4:6.02:0,6,69	1/1:1,6:7:18.01:165,18,0	1/1:3,7:10:15:137,15,0	0/1:1,6:7:13.47:46,0,13	1/1:3,21:24:26.13:293,26,0	1/1:2,8:10:15:137,15,0	1/1:3,9:12:26.04:225,26,0	1/1:0,1:1:3:27,3,0	1/1:2,16:18:30.01:275,30,0	0/0:5,0:5:15.04:0,15,173	0/0:6,0:6:10.27:0,10,107	0/0:5,0:4:9.03:0,9,104	1/1:2,5:7:5.99:55,6,0	1/1:6,1:7:11.80:95,12,0	1/1:1,7:8:15.01:137,15,0	1/1:3,1:4:6:55,6,0
chr10	66606099	.	G	GT	799.18	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=-7.470;DP=606;FS=9.521;HRun=7;HaplotypeScore=57.0028;InbreedingCoeff=0.7883;MQ=67.72;MQ0=1;MQRankSum=0.111;QD=17.76;ReadPosRankSum=-3.852;VQSLOD=1.8963;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:84.13:0,84,810	0/0:9,0:9:24.03:0,24,232	0/0:26,0:23:45.18:0,45,480	0/1:16,0:11:0:0,0,181	0/0:37,0:37:93.14:0,93,898	0/0:15,0:15:39.05:0,39,371	0/0:14,0:14:30.04:0,30,289	1/1:4,25:29:75.22:894,75,0	0/0:17,0:17:48.08:0,48,463	0/0:26,0:26:75.12:0,75,723	0/0:19,0:19:51.08:0,51,492	0/0:28,0:28:78.12:0,78,753	0/0:14,0:14:36.05:0,36,347	0/0:15,0:15:45.07:0,45,434	0/0:23,0:23:69.11:0,69,666	0/0:27,0:27:75.12:0,75,724	0/0:27,0:27:69.06:0,69,657	0/0:22,0:22:57.08:0,57,550	0/0:19,0:19:48.07:0,48,463	0/0:28,0:28:77.92:0,78,736	0/0:11,0:11:30.05:0,30,290	0/0:16,0:16:39.06:0,39,376	0/0:17,0:17:42.06:0,42,405	0/0:12,0:12:33.04:0,33,313	0/0:27,0:27:75.12:0,75,724	0/0:32,0:32:84.13:0,84,811	0/0:34,0:33:93.15:0,93,897	0/0:18,0:18:53.98:0,54,508
chr10	66606416	.	TC	T	984.53	PASS	AB=0.982;AC=22;AF=0.393;AN=56;BaseQRankSum=-1.895;DP=412;FS=4.784;HRun=11;HaplotypeScore=75.1491;InbreedingCoeff=-0.0440;MQ=67.81;MQ0=4;MQRankSum=4.475;QD=3.85;ReadPosRankSum=-4.074;VQSLOD=-0.0950;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:5,13:18:29.95:245,30,0	1/1:1,11:12:17.77:136,18,0	0/0:38,0:13:13.74:0,14,79	0/0:29,0:17:24.04:0,24,111	1/1:18,0:18:11.35:80,11,0	0/1:22,0:22:22.88:23,0,110	0/0:13,0:12:4.46:0,4,32	1/1:12,10:22:26.88:213,27,0	0/0:6,0:6:9.12:0,9,47	0/1:13,0:13:4.26:21,0,4	0/1:17,0:16:3.70:61,0,4	0/1:21,0:21:51.98:76,0,52	0/0:14,0:14:26.83:0,27,242	0/0:7,0:7:11.92:0,12,73	0/1:17,0:17:35.99:36,0,69	0/0:20,0:20:5.84:0,6,102	0/1:9,0:9:6.42:6,0,37	0/1:8,0:8:5.34:5,0,39	0/1:7,1:8:16.59:56,0,17	0/1:16,1:17:37.98:80,0,38	0/0:4,0:4:1.82:0,2,5	0/1:6,0:6:8.75:17,0,9	0/0:8,0:8:14.29:0,14,110	0/1:9,1:10:9.60:10,0,113	0/1:9,0:9:45.85:48,0,46	0/0:14,0:14:1.29:0,1,86	0/1:13,0:13:19.57:20,0,61	0/1:15,0:15:20.34:20,0,90
chr10	66606426	.	CCT	C	196.26	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=-2.872;DP=387;FS=5.165;HRun=0;HaplotypeScore=73.3455;InbreedingCoeff=-0.1678;MQ=67.20;MQ0=5;MQRankSum=2.935;QD=1.09;ReadPosRankSum=-5.715;VQSLOD=-0.4557;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:30.50:0,30,159	0/0:11,0:11:3.27:0,3,39	0/0:50,0:14:32.40:0,32,226	0/0:41,0:17:21.94:0,22,139	1/1:3,13:16:8.72:121,9,0	0/1:19,0:19:4.16:4,0,343	0/0:7,0:6:17.88:0,18,140	0/1:22,0:21:19.03:19,0,215	0/0:6,0:6:15.01:0,15,150	0/1:7,0:7:4.03:4,0,89	0/1:12,0:11:11.97:12,0,166	0/1:21,0:21:33.31:33,0,270	0/0:12,0:12:33.02:0,33,426	0/0:7,0:7:20.95:0,21,188	0/1:12,0:12:26.44:26,0,202	0/0:15,0:15:16.50:0,17,291	0/0:9,0:9:6.06:0,6,171	0/1:6,0:6:4.51:5,0,95	0/1:6,0:6:31.15:31,0,54	0/1:17,0:17:46.44:46,0,162	0/0:3,0:3:4.78:0,5,24	0/1:5,0:5:10.41:10,0,75	0/0:9,0:9:24.02:0,24,276	0/0:7,0:7:17.78:0,18,254	0/1:8,0:9:24.19:24,0,133	0/0:14,0:14:15.88:0,16,267	0/1:13,0:13:4.35:4,0,217	0/1:14,0:15:0.75:1,0,222
chr10	66607358	.	GGAAAAA	G	197.05	PASS	AB=0.876;AC=4;AF=0.071;AN=56;BaseQRankSum=3.310;DP=563;FS=0.875;HRun=0;HaplotypeScore=94.0457;InbreedingCoeff=0.3629;MQ=44.45;MQ0=42;MQRankSum=1.288;QD=3.40;ReadPosRankSum=1.286;VQSLOD=1.8285;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:29:99:139,0,152	0/1:5,0:5:58.81:72,0,59	0/0:20,0:1:3.01:0,3,45	0/0:22,0:4:6.01:0,6,58	1/1:3,15:16:14.38:97,14,0	0/0:20,0:20:42.11:0,42,799	0/0:19,0:16:32.97:0,33,560	0/0:27,0:24:68.96:0,69,932	0/0:4,0:4:11.97:0,12,205	0/0:32,0:30:84.51:0,85,1047	0/0:18,0:18:44.44:0,44,643	0/0:21,0:17:47.91:0,48,684	0/0:14,0:13:30.54:0,31,514	0/0:14,0:14:30.02:0,30,379	0/0:22,0:21:53.45:0,53,853	0/0:22,0:22:57.11:0,57,932	0/0:29,0:27:64.59:0,65,987	0/0:25,0:24:42.12:0,42,1115	0/0:19,0:18:51.92:0,52,843	0/0:15,0:15:38.97:0,39,447	0/0:14,0:14:10.57:0,11,402	0/0:21,0:19:39:0,39,574	0/0:15,0:15:41.93:0,42,526	0/0:26,0:24:42.20:0,42,570	0/0:18,0:18:47.91:0,48,529	0/0:16,0:16:42.10:0,42,757	0/0:20,0:19:53.39:0,53,870	0/0:32,0:28:57.32:0,57,893
chr10	66607489	.	TA	T	1827.73	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.817;DP=680;FS=21.189;HRun=2;HaplotypeScore=68.6169;InbreedingCoeff=0.9999;MQ=81.90;MQ0=0;MQRankSum=-1.517;QD=34.49;ReadPosRankSum=-1.348;VQSLOD=1.5479;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,105,1526	0/0:18,0:18:54.16:0,54,783	0/0:22,0:22:66.20:0,66,937	0/0:17,0:17:42.10:0,42,553	1/1:1,16:17:45.06:562,45,0	0/0:24,0:24:60.20:0,60,899	0/0:27,0:27:78.25:0,78,1127	1/1:0,36:36:99:1387,108,0	0/0:14,0:14:42.14:0,42,628	0/0:24,0:24:69.22:0,69,1002	0/0:19,0:19:57.14:0,57,810	0/0:35,0:35:99:0,102,1526	0/0:16,0:16:48.15:0,48,693	0/0:23,0:23:66.22:0,66,971	0/0:26,0:26:78.21:0,78,1117	0/0:35,0:35:99:0,102,1471	0/0:38,0:38:99:0,111,1582	0/0:27,0:27:75.22:0,75,1080	0/0:15,0:15:45.14:0,45,654	0/0:24,0:24:66.18:0,66,964	0/0:30,0:30:87.28:0,87,1283	0/0:19,0:19:54.15:0,54,785	0/0:19,0:19:54.18:0,54,809	0/0:24,0:24:63.19:0,63,906	0/0:27,0:27:81.27:0,81,1214	0/0:21,0:21:63.20:0,63,926	0/0:25,0:25:75.24:0,75,1101	0/0:21,0:21:63.21:0,63,944
chr10	66608050	.	T	TA	7947.43	PASS	AB=0.752;AC=39;AF=0.696;AN=56;BaseQRankSum=-9.139;DP=568;FS=1.839;HRun=11;HaplotypeScore=65.1189;InbreedingCoeff=0.5625;MQ=68.30;MQ0=4;MQRankSum=-1.433;QD=18.27;ReadPosRankSum=3.065;VQSLOD=6.0160;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,38:42:95.86:942,96,0	1/1:4,9:13:30.06:302,30,0	0/0:33,0:17:19.17:0,19,120	0/1:29,0:14:24.99:25,0,78	0/0:28,0:28:59.69:0,60,462	1/1:1,19:20:30.87:494,31,0	1/1:2,18:20:39.04:386,39,0	0/0:23,0:24:40.81:0,41,308	1/1:3,9:12:27.01:258,27,0	1/1:3,10:13:30.05:299,30,0	1/1:4,9:13:6.79:241,7,0	0/1:8,17:25:32.22:413,0,32	0/0:14,0:14:37.66:0,38,280	1/1:2,15:17:9.84:281,10,0	1/1:5,12:17:18.95:373,19,0	1/1:5,15:21:18.68:357,19,0	1/1:5,14:18:48.06:477,48,0	1/1:2,17:19:45.09:457,45,0	0/1:9,10:18:19.42:348,0,19	1/1:5,15:22:24.50:381,25,0	1/1:0,13:13:27.05:274,27,0	0/0:11,0:11:23.88:0,24,186	0/0:21,0:21:49.88:0,50,393	0/1:15,2:17:19.06:19,0,237	0/1:6,10:16:10.40:268,0,10	1/1:3,23:27:68.97:684,69,0	1/1:4,21:26:45.09:457,45,0	1/1:3,10:13:21.04:213,21,0
chr10	66608141	.	GAAAAA	G	5494.04	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=5.978;DP=411;FS=2.975;HRun=18;HaplotypeScore=78.7061;InbreedingCoeff=0.8631;MQ=55.56;MQ0=13;MQRankSum=-3.364;QD=22.89;ReadPosRankSum=8.494;VQSLOD=2.3589;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:20:47.17:0,47,924	0/0:7,0:9:18.06:0,18,348	0/0:15,0:2:3.01:0,3,43	0/0:19,0:5:3:0,3,28	0/0:9,0:14:24.08:0,24,573	1/1:2,7:11:26.48:343,26,0	1/1:4,8:14:22.90:283,23,0	0/0:15,0:20:42.14:0,42,977	1/1:5,5:11:17.14:226,17,0	1/1:2,4:6:11.95:174,12,0	1/1:9,5:14:14.78:201,15,0	1/1:6,2:6:2.88:43,3,0	0/0:11,0:13:27.09:0,27,673	1/1:7,5:14:23.24:295,23,0	1/1:3,12:15:32.90:479,33,0	1/1:7,5:12:27:370,27,0	1/1:8,23:32:61.71:899,62,0	1/1:6,14:20:45.01:630,45,0	1/1:8,6:14:20.25:255,20,0	1/1:5,4:10:11.23:125,11,0	1/1:7,5:12:9.09:170,9,0	0/0:9,0:14:24.55:0,25,503	0/0:14,0:14:24.08:0,24,531	0/0:18,0:26:63.69:0,64,1458	1/1:4,11:16:18.62:371,19,0	1/1:5,5:11:20.86:290,21,0	1/1:4,7:11:23.31:313,23,0	1/1:3,0:4:1.78:27,2,0
chr10	66608321	.	C	CA	13518.07	PASS	AB=0.937;AC=54;AF=0.964;AN=56;BaseQRankSum=-4.973;DP=550;FS=6.392;HRun=5;HaplotypeScore=123.0238;InbreedingCoeff=-0.0407;MQ=70.87;MQ0=8;MQRankSum=0.305;QD=24.58;ReadPosRankSum=4.536;VQSLOD=3.3094;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:9,19:28:67.83:846,68,0	1/1:3,5:7:18.05:218,18,0	0/1:66,3:31:99:125,0,367	0/1:49,5:28:99:182,0,157	1/1:3,9:12:29.42:313,29,0	1/1:2,12:14:29.93:375,30,0	1/1:0,30:30:81.23:1113,81,0	1/1:4,10:14:27.06:357,27,0	1/1:0,12:12:27.09:373,27,0	1/1:4,9:13:30.03:385,30,0	1/1:3,9:13:20.52:218,21,0	1/1:2,15:17:42.12:546,42,0	1/1:0,13:13:30.10:430,30,0	1/1:1,13:14:36.12:507,36,0	1/1:1,24:25:66.22:941,66,0	1/1:0,19:19:42.14:595,42,0	1/1:2,23:25:63.21:882,63,0	1/1:1,18:19:48.16:679,48,0	1/1:4,8:12:32.98:392,33,0	1/1:1,5:6:9.03:116,9,0	1/1:5,19:23:49.46:616,49,0	1/1:1,9:10:18.06:238,18,0	1/1:2,9:11:15.05:215,15,0	1/1:2,19:21:48.16:690,48,0	1/1:2,15:17:39.12:508,39,0	1/1:1,14:15:39.10:511,39,0	1/1:1,14:15:33.11:451,33,0	1/1:3,15:18:51.13:694,51,0
chr10	66608324	.	C	CA	6462.63	PASS	AB=1.000;AC=48;AF=0.857;AN=56;BaseQRankSum=0.549;DP=536;FS=18.556;HRun=2;HaplotypeScore=146.0678;InbreedingCoeff=0.3584;MQ=69.77;MQ0=8;MQRankSum=-2.422;QD=13.72;ReadPosRankSum=4.541;VQSLOD=2.9937;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:9,0:25:54.18:254,54,0	1/1:2,0:6:17.09:89,17,0	0/1:73,0:31:16.14:16,0,400	0/0:53,0:27:37.32:0,37,245	1/1:8,5:13:29.57:322,30,0	1/1:12,1:13:35.11:254,35,0	1/1:29,2:31:77.65:555,78,0	1/1:10,1:11:21.89:164,22,0	1/1:10,2:12:25.59:175,26,0	1/1:9,1:10:29.68:256,30,0	1/1:9,2:11:23.26:192,23,0	1/1:13,4:17:39.42:351,39,0	0/1:14,0:14:26.03:31,0,26	1/1:12,1:13:30.88:209,31,0	1/1:24,1:25:63.64:463,64,0	1/1:21,0:21:39.48:325,39,0	1/1:23,1:24:60.42:495,60,0	1/1:19,0:19:47.07:386,47,0	1/1:10,0:10:26.49:200,26,0	1/1:7,0:7:11.74:72,12,0	1/1:23,0:23:56.19:416,56,0	0/0:10,0:11:4.03:0,4,38	0/1:9,0:9:19.24:22,0,19	0/1:20,0:20:15.51:26,0,16	1/1:11,3:14:38.17:284,38,0	1/1:14,1:15:38.40:288,38,0	1/1:14,1:15:34.12:256,34,0	1/1:18,0:18:50.07:359,50,0
chr10	66608326	.	A	AAC	3726.53	PASS	AB=1.000;AC=43;AF=0.768;AN=56;BaseQRankSum=1.416;DP=551;FS=1.459;HRun=0;HaplotypeScore=170.1707;InbreedingCoeff=0.6846;MQ=70.43;MQ0=8;MQRankSum=1.148;QD=10.02;ReadPosRankSum=5.282;VQSLOD=3.4132;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:25:51.79:542,52,0	1/1:7,0:6:17.91:146,18,0	0/0:79,0:32:29.54:0,30,572	0/0:56,0:29:36.05:0,36,238	1/1:11,1:13:30.81:331,31,0	1/1:12,1:13:16.65:110,17,0	1/1:30,0:30:11.86:227,12,0	1/1:14,0:16:30.82:256,31,0	1/1:13,0:13:5.08:71,5,0	1/1:10,0:10:22.15:152,22,0	1/1:7,3:11:23.40:212,23,0	1/1:17,0:17:26.68:188,27,0	0/0:12,0:12:19.32:0,19,145	1/1:13,0:13:6.84:86,7,0	1/1:27,0:27:4.69:160,5,0	1/1:21,0:21:3.82:110,4,0	1/1:23,0:23:47.64:252,48,0	1/1:19,0:19:20.53:145,21,0	1/1:10,0:10:10.21:121,10,0	0/1:8,0:8:2.82:16,0,3	1/1:24,0:23:20.87:177,21,0	0/1:9,0:9:0.32:0,0,148	0/0:11,0:11:7.82:0,8,111	0/0:20,0:20:38.17:0,38,318	0/1:15,0:15:0.85:134,0,1	1/1:15,0:15:14.03:86,14,0	1/1:15,0:15:5.30:100,5,0	1/1:17,0:18:23.82:104,24,0
chr10	66608335	.	CA	C	2377.57	PASS	AB=0.992;AC=38;AF=0.679;AN=56;BaseQRankSum=3.395;DP=573;FS=20.972;HRun=10;HaplotypeScore=163.1047;InbreedingCoeff=0.7690;MQ=76.98;MQ0=8;MQRankSum=-1.423;QD=6.29;ReadPosRankSum=3.399;VQSLOD=0.2104;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,1:29:51.61:0,52,592	0/0:9,0:8:17.95:0,18,164	0/0:86,0:35:24.10:0,24,255	0/1:61,0:34:9.85:10,0,149	0/1:16,0:16:1.84:57,0,2	1/1:12,0:12:17.60:73,18,0	1/1:22,2:24:40.44:191,40,0	0/0:13,0:15:23.88:0,24,152	1/1:11,0:11:10.64:76,11,0	1/1:11,0:11:19.85:102,20,0	1/1:9,0:9:4.69:27,5,0	1/1:18,0:18:18.76:108,19,0	0/0:13,0:13:24.01:0,24,235	1/1:11,1:12:12.37:73,12,0	1/1:23,1:24:36.88:218,37,0	1/1:19,0:19:33.18:211,33,0	1/1:23,0:23:46.37:234,46,0	1/1:17,3:20:43.54:238,44,0	1/1:8,0:8:5.75:59,6,0	1/1:9,1:10:9.05:70,9,0	1/1:25,0:24:44.67:261,45,0	0/0:11,0:11:24.03:0,24,236	0/0:15,0:15:13.06:0,13,255	0/0:17,0:17:4.06:0,4,266	1/1:15,0:15:15.89:102,16,0	1/1:22,1:23:38.12:240,38,0	1/1:14,1:15:7.77:97,8,0	1/1:20,0:20:12.12:131,12,0
chr10	66610319	.	T	TC	981.71	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-1.439;DP=703;FS=8.353;HRun=0;HaplotypeScore=66.9508;InbreedingCoeff=0.9991;MQ=75.25;MQ0=0;MQRankSum=0.850;QD=35.06;ReadPosRankSum=1.479;VQSLOD=2.8775;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,114,1524	0/0:16,0:16:45.14:0,45,612	0/0:16,0:16:45.14:0,45,612	0/0:22,0:20:51.15:0,51,692	1/1:2,26:28:71.86:1077,72,0	0/0:21,0:21:63.21:0,63,880	0/0:39,0:39:99:0,117,1635	0/0:32,0:32:93.30:0,93,1285	0/0:20,0:20:60.17:0,60,800	0/0:27,0:27:81.26:0,81,1116	0/0:11,0:11:33.11:0,33,461	0/0:33,0:33:99:0,99,1327	0/0:14,0:14:42.05:0,42,542	0/0:27,0:27:78.25:0,78,1072	0/0:30,0:30:84.27:0,84,1156	0/0:25,0:25:75.24:0,75,1031	0/0:29,0:29:84.18:0,84,1129	0/0:32,0:32:93.25:0,93,1240	0/0:30,0:30:90.29:0,90,1228	0/0:22,0:22:66.17:0,66,868	0/0:33,0:33:96.28:0,96,1290	0/0:15,0:15:45.12:0,45,593	0/0:16,0:16:48.16:0,48,665	0/0:37,0:37:99:0,108,1445	0/0:19,0:19:57.16:0,57,754	0/0:39,0:39:99:0,114,1512	0/0:21,0:21:63.21:0,63,880	0/0:10,0:10:30.10:0,30,419
chr10	66612066	.	AG	A	8679.29	PASS	AB=0.875;AC=37;AF=0.661;AN=56;BaseQRankSum=5.141;DP=626;FS=2.368;HRun=10;HaplotypeScore=100.5830;InbreedingCoeff=0.8870;MQ=75.96;MQ0=1;MQRankSum=-2.019;QD=18.67;ReadPosRankSum=5.583;VQSLOD=4.9013;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:25:14.98:0,15,131	0/0:2,0:10:14.20:0,14,71	0/0:17,0:17:32.97:0,33,315	0/0:15,0:14:26.23:0,26,221	0/0:6,0:16:28.97:0,29,174	1/1:1,21:23:59.03:501,59,0	1/1:5,39:44:99:912,105,0	0/0:14,0:16:9.28:0,9,61	1/1:4,18:22:47.99:417,48,0	1/1:4,17:21:47.21:398,47,0	1/1:5,16:21:35.99:313,36,0	1/1:7,34:41:98.95:859,99,0	0/0:19,1:21:21.89:0,22,437	1/1:7,19:26:56.87:494,57,0	1/1:4,20:26:52.06:429,52,0	1/1:7,24:31:77.98:675,78,0	1/1:6,21:27:59.98:521,60,0	1/1:3,25:28:68.98:599,69,0	1/1:5,13:18:38.98:336,39,0	1/1:3,13:16:38.99:338,39,0	1/1:8,33:42:83:709,83,0	0/1:18,3:21:27.04:27,0,404	0/0:12,1:13:7.02:0,7,297	0/0:27,0:27:72.19:0,72,795	1/1:1,12:15:37.07:298,37,0	1/1:3,17:20:50.98:439,51,0	1/1:2,15:17:35.99:312,36,0	1/1:1,5:6:12:104,12,0
chr10	66616025	.	TG	T	22580.72	PASS	AB=0.771;AC=54;AF=0.964;AN=56;BaseQRankSum=-3.901;DP=741;FS=1.188;HRun=2;HaplotypeScore=240.3908;InbreedingCoeff=-0.0393;MQ=61.16;MQ0=3;MQRankSum=-3.449;QD=30.47;ReadPosRankSum=4.062;VQSLOD=4.1514;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,35:35:73.92:967,74,0	1/1:0,10:10:27.09:348,27,0	0/1:7,4:10:94.26:130,0,94	0/1:13,4:14:99:145,0,122	1/1:0,18:18:26.48:345,26,0	1/1:0,23:23:54.17:697,54,0	1/1:2,43:45:91.31:1199,91,0	1/1:4,15:19:47.82:593,48,0	1/1:0,25:24:54.18:705,54,0	1/1:0,29:29:87.27:1117,87,0	1/1:0,14:14:30.17:387,30,0	1/1:1,45:46:99:1611,126,0	1/1:1,39:40:99:1440,111,0	1/1:3,43:46:99:1347,109,0	1/1:1,31:32:84.74:1087,85,0	1/1:0,52:52:99:1749,136,0	1/1:1,19:18:51.17:663,51,0	1/1:0,14:14:36.12:473,36,0	1/1:3,13:16:42.13:542,42,0	1/1:3,26:29:54.96:695,55,0	1/1:6,41:46:85.42:1124,85,0	1/1:1,19:19:51.17:661,51,0	1/1:0,15:15:42.14:545,42,0	1/1:0,33:33:84.27:1090,84,0	1/1:2,24:26:57.18:737,57,0	1/1:0,26:26:75.24:981,75,0	1/1:0,29:29:84.27:1087,84,0	1/1:0,3:3:9.03:116,9,0
chr10	66616044	.	A	ACGCG	11916.14	PASS	AB=0.717;AC=41;AF=0.732;AN=56;BaseQRankSum=10.000;DP=753;FS=3.888;HRun=0;HaplotypeScore=333.9737;InbreedingCoeff=0.7662;MQ=49.18;MQ0=3;MQRankSum=-9.644;QD=19.73;ReadPosRankSum=-1.538;VQSLOD=3.8908;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:13,0:34:1.94:122,0,2	0/1:4,0:13:3.06:17,0,3	0/0:24,0:13:11.15:0,11,320	0/0:18,0:5:5.98:0,6,74	0/1:15,1:16:0:0,0,1	1/1:21,4:26:29.78:430,30,0	1/1:38,5:43:44.59:736,45,0	1/1:16,1:17:41.92:683,42,0	1/1:19,7:26:51.08:737,51,0	1/1:22,6:28:66.22:1295,66,0	1/1:13,0:13:3.01:43,3,0	1/1:39,10:49:80.36:1187,80,0	0/0:39,0:39:99:0,99,1733	1/1:36,9:45:38.78:551,39,0	1/1:25,6:31:38.90:609,39,0	1/1:37,12:49:64.97:1296,65,0	1/1:16,4:19:37.50:547,38,0	1/1:8,6:14:30.04:494,30,0	1/1:15,2:17:21.06:312,21,0	1/1:21,6:28:20.82:272,21,0	1/1:42,5:47:5.69:82,6,0	0/0:22,0:22:63.17:0,63,1026	0/0:16,0:16:30.10:0,30,516	0/0:30,0:30:69.13:0,69,1070	1/1:21,6:27:42.08:591,42,0	1/1:23,7:30:68.70:1149,69,0	1/1:18,8:24:38.60:590,39,0	1/1:3,2:5:11.40:176,11,0
chr10	66616072	.	ACACT	A	3212.73	PASS	AB=0.996;AC=32;AF=0.571;AN=56;BaseQRankSum=1.864;DP=735;FS=2.106;HRun=0;HaplotypeScore=302.9615;InbreedingCoeff=0.1399;MQ=48.11;MQ0=12;MQRankSum=-0.353;QD=5.57;ReadPosRankSum=-9.764;VQSLOD=0.0811;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:38,2:40:8.67:318,9,0	1/1:9,2:11:9.25:150,9,0	0/1:37,0:12:16.12:16,0,215	0/0:30,0:8:7.98:0,8,146	0/0:13,0:13:3.17:0,3,24	0/1:29,0:29:15.49:157,0,15	1/1:39,1:40:1.76:196,2,0	1/1:24,0:24:44.19:439,44,0	0/1:27,0:27:45.83:102,0,46	1/1:26,0:26:31.77:292,32,0	1/1:17,0:17:20.76:148,21,0	0/1:41,0:41:93.14:170,0,93	0/0:40,0:40:99:0,111,2141	0/1:34,0:34:51.31:58,0,51	0/1:27,0:27:9.83:164,0,10	0/1:48,0:48:52.39:283,0,52	1/1:21,1:21:0.56:154,1,0	1/1:17,0:17:15.94:161,16,0	1/1:7,0:7:17.81:134,18,0	0/1:22,1:23:7.58:23,0,8	1/1:38,0:38:9.54:66,10,0	0/0:25,0:25:44.46:0,44,1273	0/0:15,0:15:39.07:0,39,680	0/0:30,0:30:61.52:0,62,1323	0/1:17,0:17:30.07:30,0,46	1/1:32,0:32:3.91:312,4,0	0/1:20,0:19:22.91:23,0,29	0/0:5,0:3:6.59:0,7,30
chr10	66616074	.	ACT	A	8730.44	PASS	AB=0.774;AC=42;AF=0.750;AN=56;BaseQRankSum=9.375;DP=721;FS=1.262;HRun=0;HaplotypeScore=257.6630;InbreedingCoeff=0.6650;MQ=49.41;MQ0=12;MQRankSum=-7.082;QD=14.98;ReadPosRankSum=-2.805;VQSLOD=4.0063;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:29,9:38:55.92:538,56,0	1/1:5,6:11:23.17:251,23,0	0/1:38,0:13:4.15:4,0,186	0/0:30,0:8:8.25:0,8,123	1/1:14,0:14:5.56:45,6,0	1/1:17,12:29:33.19:425,33,0	1/1:28,10:38:38.92:436,39,0	1/1:24,0:24:66.12:514,66,0	1/1:14,13:27:20.30:459,20,0	1/1:12,12:24:53.29:641,53,0	1/1:13,4:17:22.37:243,22,0	1/1:18,22:40:57.01:799,57,0	0/0:40,0:40:55.90:0,56,1532	0/1:18,14:32:2.17:231,0,2	0/1:14,12:26:6.93:309,0,7	1/1:19,28:47:94.92:1092,95,0	1/1:15,6:20:23.17:373,23,0	1/1:10,8:18:51.36:522,51,0	1/1:7,0:7:20.91:184,21,0	1/1:14,9:23:15.91:184,16,0	1/1:26,12:38:20.11:212,20,0	0/0:25,0:25:44.28:0,44,947	0/0:15,0:15:38.97:0,39,482	0/0:28,0:28:49.88:0,50,1024	1/1:7,10:17:26.40:238,26,0	1/1:19,12:31:80.53:745,81,0	1/1:10,8:17:20.78:230,21,0	0/1:3,2:3:8.54:55,0,9
chr10	66616234	.	AG	A	15239.19	PASS	AB=1.000;AC=39;AF=0.696;AN=56;BaseQRankSum=15.901;DP=763;FS=0.297;HRun=5;HaplotypeScore=179.5181;InbreedingCoeff=0.9376;MQ=72.62;MQ0=0;MQRankSum=-4.282;QD=28.70;ReadPosRankSum=1.049;VQSLOD=2.4043;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:57:99:0,138,1241	0/0:9,0:9:23.97:0,24,202	0/0:15,0:15:42.11:0,42,532	0/1:17,0:17:4.19:4,0,264	0/0:26,0:26:66.22:0,66,888	1/1:1,26:27:78.22:884,78,0	1/1:4,29:33:81.23:917,81,0	1/1:2,33:35:99:1059,99,0	1/1:1,24:25:66.19:748,66,0	1/1:3,21:24:63.14:700,63,0	1/1:1,13:14:36.10:408,36,0	1/1:1,35:36:96.16:1088,96,0	0/0:41,0:41:99:0,111,1515	1/1:2,22:24:66.19:748,66,0	1/1:1,26:27:72.21:816,72,0	1/1:1,36:37:99:1155,102,0	1/1:3,35:38:90.25:1021,90,0	1/1:2,21:23:57.16:647,57,0	1/1:0,9:9:27.03:283,27,0	1/1:0,14:14:36.10:408,36,0	1/1:2,57:59:99:1735,153,0	0/0:23,0:23:63.21:0,63,861	0/0:20,0:20:57.19:0,57,778	0/0:41,0:41:99:0,120,1623	1/1:0,27:27:72.21:816,72,0	1/1:1,25:26:75.21:850,75,0	1/1:4,25:29:66.18:748,66,0	1/1:1,6:7:18.05:204,18,0
chr10	66621300	.	T	TAA	4893.91	PASS	AB=0.966;AC=44;AF=0.786;AN=56;BaseQRankSum=1.000;DP=613;FS=18.389;HRun=21;HaplotypeScore=111.4846;InbreedingCoeff=0.7096;MQ=56.58;MQ0=9;MQRankSum=-1.436;QD=9.71;ReadPosRankSum=-0.430;VQSLOD=0.7606;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:37,0:37:58.30:389,58,0	1/1:11,0:11:15.36:117,15,0	0/0:38,0:12:0.02:0,0,11	0/0:17,0:11:5.48:0,5,24	1/1:26,0:26:26.31:164,26,0	1/1:22,0:22:44.36:345,44,0	1/1:9,12:21:5.95:50,6,0	0/1:38,0:41:11.65:107,0,12	1/1:11,0:10:14.97:125,15,0	1/1:19,0:21:33.01:248,33,0	1/1:10,11:21:28.85:184,29,0	1/1:20,0:20:28.58:217,29,0	0/0:15,0:15:9.87:0,10,54	1/1:22,0:21:36.52:254,37,0	1/1:27,0:27:51.88:397,52,0	1/1:33,0:33:56.49:434,56,0	1/1:12,0:12:27.24:224,27,0	1/1:14,0:15:30.01:277,30,0	1/1:22,0:22:27.72:189,28,0	1/1:20,0:20:11.92:89,12,0	1/1:11,0:11:12.75:86,13,0	0/1:11,0:11:0:0,0,0	0/0:20,0:21:7.87:0,8,49	0/0:17,0:16:17.21:0,17,112	1/1:25,0:25:38.98:254,39,0	1/1:12,0:20:27.60:184,28,0	1/1:25,0:24:33.86:226,34,0	1/1:30,0:29:45.81:333,46,0
chr10	66622159	.	CT	C	16710.27	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=12.721;DP=669;FS=3.620;HRun=2;HaplotypeScore=69.8619;InbreedingCoeff=0.9992;MQ=74.04;MQ0=0;MQRankSum=-2.650;QD=35.63;ReadPosRankSum=2.704;VQSLOD=5.5841;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,114,1708	0/0:9,0:9:27.09:0,27,405	0/0:10,0:10:21.34:0,21,282	0/0:18,0:18:47.81:0,48,621	1/1:1,25:26:63.10:817,63,0	1/1:0,25:25:72.23:934,72,0	1/1:1,24:25:66.21:857,66,0	0/0:38,0:39:99:0,111,1601	1/1:0,29:29:87.28:1129,87,0	1/1:0,16:16:42.14:546,42,0	1/1:1,16:17:45.14:576,45,0	1/1:0,37:37:99:1441,111,0	0/0:31,0:31:93.32:0,93,1394	1/1:1,29:30:78.25:1013,78,0	1/1:0,37:37:99:1441,111,0	1/1:2,29:31:75.24:974,75,0	1/1:0,31:31:87.28:1129,87,0	1/1:1,13:14:33.11:426,33,0	1/1:0,20:20:60.17:753,60,0	1/1:0,18:18:51.17:662,51,0	1/1:0,28:28:75.24:974,75,0	0/0:14,0:14:42.14:0,42,630	0/0:14,0:14:42.14:0,42,630	0/0:27,0:27:81.21:0,81,1162	1/1:1,17:18:51.17:662,51,0	1/1:0,24:24:72.23:935,72,0	1/1:1,16:17:36.12:467,36,0	1/1:0,26:26:75.24:973,75,0
chr10	66623151	.	C	CACCT	29111.86	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-14.486;DP=785;FS=4.943;HRun=0;HaplotypeScore=120.1970;InbreedingCoeff=0.9993;MQ=86.16;MQ0=1;MQRankSum=-7.270;QD=55.88;ReadPosRankSum=4.763;VQSLOD=5.9690;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,108,1929	0/0:18,0:18:51.17:0,51,927	0/0:28,0:28:73.67:0,74,1318	0/0:31,0:30:78.22:0,78,1371	1/1:4,16:20:42.14:1047,42,0	1/1:2,11:14:30.10:792,30,0	1/1:10,26:36:84.29:2068,84,0	0/0:36,0:36:93.29:0,93,1588	1/1:10,26:39:84.29:2076,84,0	1/1:2,21:24:66.20:1645,66,0	1/1:3,7:11:24.08:579,24,0	1/1:6,32:39:99:2555,105,0	0/0:22,0:22:66.23:0,66,1210	1/1:6,21:28:57.20:1480,57,0	1/1:2,32:36:93.32:2360,93,0	1/1:2,34:40:93.15:2315,93,0	1/1:2,17:21:48.16:1267,48,0	1/1:4,29:35:87.27:2196,87,0	1/1:5,18:23:57.20:1435,57,0	1/1:2,13:17:36.12:876,36,0	1/1:13,31:44:59.48:1561,59,0	0/0:31,0:31:84.29:0,84,1528	0/0:22,0:22:66.22:0,66,1184	0/0:37,0:37:99:0,108,1974	1/1:2,21:25:51.17:1255,51,0	1/1:8,23:31:72.25:1878,72,0	1/1:3,17:24:45.15:1159,45,0	1/1:0,12:13:24.08:569,24,0
chr10	66625239	.	AG	A	10792.89	PASS	AB=0.794;AC=45;AF=0.804;AN=56;BaseQRankSum=6.762;DP=659;FS=2.242;HRun=10;HaplotypeScore=110.5162;InbreedingCoeff=0.6106;MQ=68.94;MQ0=0;MQRankSum=-1.808;QD=17.96;ReadPosRankSum=3.745;VQSLOD=4.7240;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:10,0:59:91.65:269,92,0	1/1:0,0:11:20.37:60,20,0	0/0:11,0:11:1.79:0,2,160	0/0:13,0:12:23.57:0,24,201	1/1:7,14:21:38.97:338,39,0	1/1:1,22:23:65.99:572,66,0	1/1:12,30:42:74.89:651,75,0	0/1:10,8:18:2.70:157,0,3	1/1:1,22:23:62.99:547,63,0	1/1:4,16:20:50.93:441,51,0	1/1:3,9:12:32.98:286,33,0	1/1:4,32:36:83.91:729,84,0	0/1:18,4:22:47.09:47,0,415	1/1:7,25:32:71.93:625,72,0	1/1:6,31:37:92.94:807,93,0	1/1:4,25:29:80.94:696,81,0	1/1:0,47:47:99:1120,129,0	1/1:4,24:28:68.96:599,69,0	1/1:6,19:25:53.95:468,54,0	1/1:6,11:17:38.94:338,39,0	1/1:3,35:38:99:910,105,0	0/1:13,3:16:42.07:42,0,262	0/0:9,0:9:24.06:0,24,265	0/0:23,2:25:8.04:0,8,537	1/1:1,17:18:53.99:469,54,0	1/1:0,10:10:29.99:260,30,0	1/1:4,8:12:26.99:234,27,0	1/1:0,5:5:15:130,15,0
chr10	66625410	.	T	TTG	5447.32	PASS	AB=0.594;AC=29;AF=0.518;AN=56;BaseQRankSum=10.739;DP=684;FS=22.236;HRun=0;HaplotypeScore=118.4762;InbreedingCoeff=0.2521;MQ=71.41;MQ0=2;MQRankSum=-2.209;QD=11.89;ReadPosRankSum=3.171;VQSLOD=3.0630;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,150,2336	0/0:4,0:4:12.02:0,12,149	0/0:21,0:21:60.13:0,60,830	0/0:23,0:21:41.09:0,41,622	1/1:4,0:25:7.55:231,8,0	1/1:3,0:17:21.56:295,22,0	1/1:6,0:33:1.01:451,1,0	0/0:18,0:18:36.08:0,36,508	1/1:0,1:17:28.20:223,28,0	0/1:4,0:10:41.61:73,0,42	1/1:3,1:12:0.15:147,0,0	0/1:9,0:36:44.67:322,0,45	0/0:37,0:37:99:0,108,1657	0/1:4,0:21:19.21:311,0,19	0/1:9,0:38:12.08:401,0,12	1/1:4,0:32:32.52:373,33,0	0/1:8,0:44:84.88:505,0,85	1/1:1,1:22:19.88:301,20,0	0/1:11,0:17:45.56:208,0,46	1/1:5,0:13:32.20:244,32,0	1/1:21,0:53:2.07:593,2,0	0/0:23,0:23:69.23:0,69,1103	0/0:6,0:6:15.05:0,15,243	0/0:41,0:42:99:0,105,1910	0/1:6,0:14:74.67:114,0,75	0/1:7,0:24:99:271,0,101	1/1:1,0:17:20.77:307,21,0	0/1:1,0:8:13.37:77,0,13
chr10	66627631	.	T	TC	830.58	PASS	AB=0.833;AC=5;AF=0.093;AN=54;BaseQRankSum=-2.100;DP=356;FS=13.229;HRun=4;HaplotypeScore=39.4457;InbreedingCoeff=0.6009;MQ=69.31;MQ0=1;MQRankSum=0.777;QD=24.43;ReadPosRankSum=-1.031;VQSLOD=1.5180;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,23:24:57.19:776,57,0	1/1:0,5:5:12.04:164,12,0	0/1:4,1:5:14:14,0,85	0/0:7,0:6:12.02:0,12,122	0/0:4,0:4:6.02:0,6,68	0/0:7,0:7:12.01:0,12,124	0/0:30,0:30:84.20:0,84,938	0/0:10,0:10:24.07:0,24,270	0/0:8,0:8:21.06:0,21,238	0/0:7,0:7:18.05:0,18,199	./.	0/0:18,0:18:47.61:0,48,507	0/0:9,0:9:24.05:0,24,262	0/0:21,0:21:51.14:0,51,577	0/0:18,0:18:48.13:0,48,542	0/0:11,0:11:30.09:0,30,340	0/0:27,0:27:72.20:0,72,816	0/0:32,0:32:84.19:0,84,936	0/0:14,0:14:32.68:0,33,349	0/0:5,0:5:15.04:0,15,170	0/0:45,0:44:99:0,111,1244	0/0:3,0:3:3.01:0,3,34	0/0:5,0:5:14.53:0,15,143	0/0:17,0:17:48.13:0,48,537	0/0:7,0:7:21.04:0,21,225	0/0:7,0:7:21.06:0,21,238	0/0:7,0:7:18.05:0,18,204	0/0:2,0:2:3.01:0,3,34
chr10	66627952	.	CA	C	213.63	PASS	AC=12;AF=0.750;AN=16;BaseQRankSum=-1.666;DP=13;FS=6.021;HRun=1;HaplotypeScore=8.8407;MQ=102.93;MQ0=0;MQRankSum=-1.666;QD=26.70;ReadPosRankSum=-0.067;VQSLOD=2.8822;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:1,0:1:3.01:0,3,41	0/0:1,0:1:0.89:0,1,2	./.	./.	1/1:0,3:3:6.02:83,6,0	./.	./.	1/1:0,1:1:3.01:42,3,0	./.	1/1:0,1:1:3.01:42,3,0	./.	./.	./.	./.	./.	./.	1/1:0,1:1:3.01:42,3,0	./.	./.	./.	./.	./.	1/1:0,1:1:3.01:42,3,0	1/1:0,1:1:3.01:42,3,0	./.	./.
chr10	66627971	.	GA	G	39.02	PASS	AC=8;AF=0.80;AN=10;DP=9;FS=0.000;HRun=1;HaplotypeScore=11.9644;MQ=122.19;MQ0=0;QD=7.80;VQSLOD=0.4770;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	1/1:1,0:1:2.94:18,3,0	0/0:1,0:1:0:0,0,0	./.	./.	1/1:0,2:2:3.01:35,3,0	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	1/1:0,1:1:2.96:19,3,0	./.	./.	./.	./.	1/1:0,1:1:3.01:33,3,0	./.	./.	./.	./.
chr10	66627985	.	GA	G	236.86	PASS	AC=8;AF=0.80;AN=10;BaseQRankSum=-0.751;DP=15;FS=3.522;HRun=1;HaplotypeScore=17.6554;MQ=101.84;MQ0=0;MQRankSum=0.751;QD=21.53;ReadPosRankSum=0.751;VQSLOD=3.6131;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	0/0:3,0:3:2.04:0,2,6	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	1/1:0,2:2:3.01:38,3,0	1/1:0,1:1:3.01:42,3,0	1/1:0,6:6:12:145,12,0	./.	./.	1/1:0,2:2:6.02:83,6,0	./.	./.	./.	./.
chr10	66630432	.	C	CTCAGGGGACAGACCTGGGTGAGTCAC	2454.74	PASS	AB=0.731;AC=24;AF=0.923;AN=26;BaseQRankSum=-1.373;DP=51;FS=9.874;HRun=0;HaplotypeScore=42.4859;InbreedingCoeff=-0.2481;MQ=158.12;MQ0=0;MQRankSum=-1.617;QD=64.60;ReadPosRankSum=-0.397;VQSLOD=0.8094;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	1/1:1,0:1:3.01:240,3,0	0/1:5,0:9:51.72:780,0,52	0/1:7,1:10:32.61:790,0,33	./.	./.	./.	./.	./.	1/1:2,0:2:6.02:160,6,0	./.	./.	1/1:1,0:1:3:25,3,0	./.	1/1:1,0:1:3.01:49,3,0	1/1:1,0:2:3.01:121,3,0	1/1:2,0:3:2.98:22,3,0	./.	1/1:1,0:1:2.99:23,3,0	./.	1/1:1,0:1:2.98:21,3,0	1/1:1,0:2:3:26,3,0	1/1:1,0:2:6.02:209,6,0	./.	./.	./.	1/1:3,0:3:6:75,6,0	./.
chr10	66630712	.	G	GA	147.25	PASS	AB=0.500;AC=7;AF=0.70;AN=10;BaseQRankSum=2.037;DP=245;FS=0.000;HRun=0;HaplotypeScore=27.0141;MQ=9.45;MQ0=219;MQRankSum=1.034;QD=5.89;ReadPosRankSum=0.000;VQSLOD=2.4658;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/1:0,3:3:7.85:22,0,8	./.	./.	./.	./.	./.	./.	./.	./.	1/1:2,2:2:3.01:30,3,0	./.	./.	./.	./.	./.	./.	./.	./.	1/1:0,8:8:2.11:75,2,0	./.	0/0:1,1:1:0.47:0,0,1	./.	./.	1/1:0,10:10:6.68:91,7,0	./.	./.	./.
chr10	66631120	.	T	TA	8462.86	PASS	AC=52;AF=1.000;AN=52;DP=312;FS=0.000;HRun=0;HaplotypeScore=104.2084;InbreedingCoeff=-0.0193;MQ=30.51;MQ0=3;QD=27.57;VQSLOD=4.9715;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,19:19:21:268,21,0	1/1:0,4:4:12.04:166,12,0	./.	./.	1/1:0,15:15:11.97:142,12,0	1/1:0,6:6:18.06:251,18,0	1/1:0,17:17:42.10:560,42,0	1/1:0,18:18:51.17:712,51,0	1/1:0,6:6:12.04:167,12,0	1/1:0,16:16:45.15:626,45,0	1/1:0,11:11:11.79:123,12,0	1/1:0,14:14:39.10:521,39,0	1/1:0,7:7:18.05:235,18,0	1/1:0,12:12:36.12:503,36,0	1/1:0,13:13:33.11:459,33,0	1/1:0,20:20:54.15:731,54,0	1/1:0,18:18:27.05:352,27,0	1/1:0,12:12:33.11:459,33,0	1/1:1,3:3:9.03:127,9,0	1/1:0,12:12:11.96:125,12,0	1/1:0,13:13:18.01:229,18,0	1/1:0,16:16:11.92:124,12,0	1/1:0,10:10:24.04:309,24,0	1/1:0,13:13:8.98:103,9,0	1/1:0,9:9:27.05:354,27,0	1/1:0,12:12:36.11:486,36,0	1/1:0,9:9:21.07:287,21,0	1/1:0,1:1:3.01:43,3,0
chr10	66632284	.	G	GT	18333.93	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-13.736;DP=601;FS=3.368;HRun=1;HaplotypeScore=64.0009;InbreedingCoeff=0.9984;MQ=84.72;MQ0=0;MQRankSum=-3.969;QD=43.04;ReadPosRankSum=4.694;VQSLOD=4.8202;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,105,1451	0/0:6,0:6:18.02:0,18,230	0/0:20,0:20:60.19:0,60,789	0/0:22,0:22:66.08:0,66,798	1/1:0,24:24:57.19:910,57,0	1/1:0,17:17:48.16:767,48,0	1/1:0,28:28:78.27:1247,78,0	0/0:25,0:25:69.20:0,69,918	1/1:0,23:23:60.20:958,60,0	1/1:0,18:18:54.18:863,54,0	1/1:0,13:13:33.11:527,33,0	1/1:1,24:25:63.21:1006,63,0	0/0:21,0:21:63.21:0,63,874	1/1:0,20:20:54.18:863,54,0	1/1:1,14:15:39.13:623,39,0	1/1:0,16:16:45.15:719,45,0	1/1:0,31:31:90.31:1439,90,0	1/1:0,25:25:66.23:1055,66,0	1/1:0,12:12:36.12:576,36,0	1/1:1,28:29:60.20:959,60,0	1/1:0,57:57:99:2638,166,0	0/0:15,0:15:42.14:0,42,587	0/0:11,0:11:30.10:0,30,419	0/0:18,0:18:54.18:0,54,755	1/1:1,19:20:51.17:815,51,0	1/1:0,29:29:81.28:1294,81,0	1/1:0,14:14:42.11:644,42,0	1/1:0,10:10:27.09:431,27,0
chr10	66632476	.	A	AG	15290.35	PASS	AB=0.723;AC=54;AF=0.964;AN=56;BaseQRankSum=2.095;DP=414;FS=7.914;HRun=1;HaplotypeScore=194.5033;InbreedingCoeff=-0.0411;MQ=50.78;MQ0=0;MQRankSum=-3.344;QD=36.93;ReadPosRankSum=3.125;VQSLOD=3.5931;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,20:21:54.18:860,54,0	1/1:0,8:8:24.08:381,24,0	0/1:1,3:4:26.53:123,0,27	0/1:6,1:7:86.79:171,0,87	1/1:1,12:13:9.03:143,9,0	1/1:1,15:16:42.14:669,42,0	1/1:1,17:18:45.15:715,45,0	1/1:0,22:22:60.20:951,60,0	1/1:1,13:14:39.13:619,39,0	1/1:1,17:18:51.17:813,51,0	1/1:1,13:14:24.08:381,24,0	1/1:0,21:21:57.19:908,57,0	1/1:0,15:15:42.14:666,42,0	1/1:2,17:19:54.18:849,54,0	1/1:0,11:11:30.10:478,30,0	1/1:2,16:18:45.15:715,45,0	1/1:1,9:10:24.08:382,24,0	1/1:1,12:13:36.12:574,36,0	1/1:3,14:17:48.12:740,48,0	1/1:3,6:9:12.04:190,12,0	1/1:2,16:18:23.71:380,24,0	1/1:0,16:16:36.12:572,36,0	1/1:0,16:16:27.09:430,27,0	1/1:1,15:16:17.67:286,18,0	1/1:2,13:15:30.10:478,30,0	1/1:1,16:17:51.17:813,51,0	1/1:2,17:19:42.14:669,42,0	1/1:1,8:9:21.07:335,21,0
chr10	66632702	.	A	AAAACAAAC	7002.62	PASS	AB=0.625;AC=39;AF=0.696;AN=56;BaseQRankSum=9.986;DP=612;FS=1.634;HRun=0;HaplotypeScore=160.2064;InbreedingCoeff=0.8578;MQ=55.29;MQ0=11;MQRankSum=-2.267;QD=15.77;ReadPosRankSum=1.574;VQSLOD=4.3047;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,10:21:27.09:931,27,0	1/1:3,2:5:9.03:320,9,0	0/0:20,0:10:4.70:0,5,89	0/0:26,0:13:9.03:0,9,138	0/0:22,0:22:36.08:0,36,750	1/1:4,11:17:18.06:739,18,0	1/1:10,0:26:32.96:270,33,0	0/0:24,0:24:36.10:0,36,756	1/1:7,0:12:17.97:147,18,0	1/1:15,0:22:24.03:278,24,0	1/1:9,0:18:26.92:214,27,0	1/1:11,0:33:50.86:409,51,0	0/0:16,0:16:18.06:0,18,453	1/1:8,0:18:29.57:233,30,0	1/1:7,0:22:32.52:269,33,0	1/1:12,0:37:50.93:422,51,0	1/1:10,0:29:50.36:419,50,0	1/1:9,0:23:30.43:246,30,0	1/1:10,0:19:29.95:247,30,0	1/1:10,0:23:38.82:336,39,0	1/1:5,0:17:20.97:171,21,0	0/0:6,0:6:8.96:0,9,169	0/0:12,0:12:27.09:0,27,663	0/0:42,0:42:35.40:0,35,1806	0/1:8,0:20:44.55:169,0,45	1/1:10,0:31:65.40:544,65,0	1/1:14,0:30:50.93:469,51,0	1/1:5,0:12:20.97:171,21,0
chr10	66632917	.	AAAAAAAAAAAAAAAAACAAG	A	1083.31	PASS	AB=0.979;AC=21;AF=0.375;AN=56;BaseQRankSum=2.172;DP=574;FS=49.642;HRun=0;HaplotypeScore=168.7407;InbreedingCoeff=-0.5151;MQ=38.46;MQ0=108;MQRankSum=0.311;QD=3.20;ReadPosRankSum=-2.070;VQSLOD=0.8599;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:18:21.62:0,22,1451	0/1:5,0:5:8.84:9,0,374	0/0:77,0:12:9.01:0,9,359	0/0:108,0:18:39.34:0,39,741	0/1:16,0:15:59.93:60,0,110	0/1:18,0:16:37.74:135,0,38	0/1:17,0:15:99:112,0,105	0/1:38,0:24:41.81:42,0,228	0/1:12,0:8:58.42:82,0,58	0/1:14,0:12:33.47:91,0,33	0/1:7,3:10:22.06:22,0,54	0/1:10,0:10:43.74:44,0,62	0/0:7,0:6:15.05:0,15,635	0/1:4,1:4:29.48:130,0,29	0/1:17,0:13:15.35:15,0,109	0/1:15,0:14:47.16:151,0,47	0/1:23,0:18:37.84:38,0,141	0/1:9,0:10:13.28:13,0,94	0/1:40,0:18:99:138,0,153	0/1:13,0:9:2.33:2,0,214	0/0:5,0:2:3.78:0,4,10	0/0:3,0:1:3.01:0,3,31	0/0:6,0:2:6.02:0,6,268	0/0:6,0:5:10.85:0,11,578	0/1:12,0:10:19.47:19,0,51	1/1:17,0:10:0.41:50,0,0	0/1:18,0:16:61.33:61,0,111	0/1:29,0:10:20.67:21,0,74
chr10	66633040	.	TCA	T	11764.65	PASS	AC=38;AF=0.704;AN=54;BaseQRankSum=11.215;DP=456;FS=3.755;HRun=0;HaplotypeScore=88.4678;InbreedingCoeff=0.9736;MQ=51.98;MQ0=20;MQRankSum=0.833;QD=37.83;ReadPosRankSum=5.071;VQSLOD=7.0014;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,99,1793	0/0:5,0:5:12.04:0,12,224	0/0:12,0:3:8.24:0,8,119	0/0:15,0:7:18.06:0,18,337	1/1:0,14:13:33.11:486,33,0	1/1:1,21:22:48.16:706,48,0	1/1:1,24:23:69.23:1015,69,0	0/0:41,0:37:99:0,102,1863	1/1:0,7:7:21.03:285,21,0	1/1:0,6:6:18.06:265,18,0	1/1:1,13:13:36.12:530,36,0	1/1:0,16:16:42.14:618,42,0	0/0:10,0:10:30.10:0,30,559	1/1:0,5:5:15.05:221,15,0	1/1:0,15:14:33.11:486,33,0	1/1:0,10:10:24.08:353,24,0	1/1:2,19:20:54.18:794,54,0	1/1:0,21:21:57.19:839,57,0	1/1:0,18:16:48.16:691,48,0	1/1:1,18:18:45.11:638,45,0	1/1:1,22:23:54.14:771,54,0	./.	0/0:5,0:5:15.05:0,15,276	0/0:22,0:21:57.20:0,57,1054	1/1:0,19:19:51.13:726,51,0	1/1:0,19:19:57.19:839,57,0	1/1:0,21:21:63.21:927,63,0	1/1:2,14:16:39.13:574,39,0
chr10	66633221	.	CGT	C	5083.57	PASS	AB=0.697;AC=37;AF=0.661;AN=56;BaseQRankSum=1.366;DP=459;FS=1.179;HRun=0;HaplotypeScore=75.8758;InbreedingCoeff=0.5973;MQ=58.78;MQ0=10;MQRankSum=-0.190;QD=14.16;ReadPosRankSum=1.051;VQSLOD=4.5684;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:14,4:43:99:106,0,343	0/0:1,0:4:3:0,3,26	0/0:19,0:6:3.01:0,3,47	0/0:18,0:7:3.01:0,3,38	0/0:4,0:20:26.99:0,27,237	1/1:6,17:25:50.81:545,51,0	1/1:4,5:10:14.71:131,15,0	1/1:16,0:20:11.67:77,12,0	1/1:3,5:9:20.89:221,21,0	1/1:7,5:13:14.88:152,15,0	1/1:8,12:20:21.06:241,21,0	1/1:2,12:15:35.93:390,36,0	0/0:8,0:9:6.93:0,7,265	1/1:2,6:9:20.89:221,21,0	1/1:2,8:8:15.04:172,15,0	1/1:4,4:9:11.87:117,12,0	1/1:6,17:23:18.12:393,18,0	1/1:2,23:26:56.83:614,57,0	1/1:9,6:14:15.04:172,15,0	1/1:7,4:10:12.03:138,12,0	0/1:14,21:36:29.31:226,0,29	0/0:7,0:6:12.04:0,12,178	0/0:7,0:7:18.06:0,18,276	0/0:14,2:16:4.64:0,5,521	1/1:6,9:15:10.53:228,11,0	0/1:3,11:14:15.73:276,0,16	1/1:4,11:17:29.75:304,30,0	1/1:3,10:14:32.76:358,33,0
chr10	66633320	.	CGTG	C	661.20	PASS	AB=0.961;AC=17;AF=0.304;AN=56;BaseQRankSum=6.498;DP=425;FS=0.000;HRun=0;HaplotypeScore=88.1036;InbreedingCoeff=-0.2806;MQ=76.51;MQ0=5;MQRankSum=-5.720;QD=3.02;ReadPosRankSum=3.827;VQSLOD=1.4271;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:27:60.54:0,61,921	0/0:1,0:1:3.01:0,3,68	0/0:40,0:22:33.89:0,34,648	0/0:45,0:21:23.35:0,23,487	0/0:13,0:13:5.46:0,5,126	0/1:12,0:12:0.66:56,0,1	0/1:18,0:18:49.47:49,0,147	0/0:19,0:19:44.85:0,45,686	0/1:14,1:15:49.10:49,0,77	0/0:7,0:7:4.89:0,5,52	0/1:12,0:11:31.63:32,0,41	0/1:8,0:8:15.18:32,0,15	0/0:15,0:15:36.12:0,36,599	1/1:4,0:4:2.04:6,2,0	0/1:17,3:20:8.66:209,0,9	0/1:6,0:6:19.75:31,0,20	0/1:24,0:24:66.95:67,0,81	0/1:13,2:15:29.75:89,0,30	0/1:25,0:26:15.08:15,0,296	0/1:8,0:8:26.37:26,0,44	0/0:13,0:12:19.51:0,20,146	0/0:2,0:2:6.01:0,6,75	0/0:10,0:10:30.10:0,30,534	0/0:8,0:8:21.06:0,21,391	0/1:17,1:17:61.08:68,0,61	0/1:8,0:8:17.84:36,0,18	0/1:13,0:13:18.12:18,0,68	0/1:10,1:11:17.98:32,0,18
chr10	66633323	.	GTTT	G	2881.65	PASS	AB=0.703;AC=35;AF=0.625;AN=56;BaseQRankSum=0.517;DP=449;FS=0.543;HRun=17;HaplotypeScore=80.4716;InbreedingCoeff=0.5927;MQ=70.90;MQ0=19;MQRankSum=-1.644;QD=11.00;ReadPosRankSum=3.895;VQSLOD=0.2962;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:30:64.37:0,64,544	0/0:2,0:2:5.97:0,6,47	0/0:41,0:20:3.58:0,4,99	0/0:49,0:20:18.79:0,19,171	0/1:4,1:15:35.40:35,0,58	1/1:3,10:12:24.05:246,24,0	1/1:9,5:16:11.78:220,12,0	0/0:18,0:19:23.13:0,23,225	1/1:12,3:14:32.43:277,32,0	1/1:6,1:7:10.12:82,10,0	1/1:5,6:10:14.44:153,14,0	1/1:7,2:8:14.85:147,15,0	0/0:19,0:19:26.68:0,27,338	1/1:1,4:4:3.01:31,3,0	1/1:10,8:20:37.59:372,38,0	1/1:4,3:7:10.47:120,10,0	1/1:7,16:23:22.91:231,23,0	1/1:11,5:15:26.38:231,26,0	0/1:21,3:23:23.72:203,0,24	0/1:5,4:10:26.54:103,0,27	1/1:8,4:10:1.54:28,2,0	0/0:0,0:1:2.99:0,3,23	0/0:11,0:10:19.68:0,20,263	0/0:10,0:10:15.03:0,15,225	1/1:8,9:18:21.10:187,21,0	1/1:9,3:9:1.92:164,2,0	1/1:7,3:11:16.59:149,17,0	1/1:12,1:11:14.71:97,15,0
chr10	66633338	.	TTTC	T	1460.44	PASS	AB=0.986;AC=25;AF=0.446;AN=56;BaseQRankSum=7.857;DP=516;FS=13.878;HRun=0;HaplotypeScore=81.8411;InbreedingCoeff=-0.4578;MQ=51.45;MQ0=44;MQRankSum=-1.412;QD=3.13;ReadPosRankSum=6.151;VQSLOD=0.1521;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:36,0:29:9.77:10,0,341	0/0:4,0:4:8.87:0,9,76	0/1:38,0:13:8.10:8,0,36	0/1:45,0:13:2.15:2,0,80	0/1:18,1:17:49.94:50,0,72	0/1:17,0:14:10.10:97,0,10	0/1:16,0:15:16.88:131,0,17	0/0:22,1:17:2.67:0,3,186	0/1:16,0:15:45.91:148,0,46	0/1:9,0:6:12.72:53,0,13	0/1:18,0:14:49.47:49,0,63	0/1:12,0:10:13.55:92,0,14	0/1:16,0:15:1.91:2,0,293	0/0:9,0:8:1.26:0,1,27	0/1:17,5:21:24.55:163,0,25	1/1:6,0:6:7.75:47,8,0	0/1:30,0:29:58.40:83,0,58	0/1:17,0:13:6.23:110,0,6	0/1:38,0:26:45.90:116,0,46	0/1:14,0:10:10.91:50,0,11	0/1:14,0:9:1.66:2,0,43	0/0:3,0:2:5.99:0,6,50	0/1:11,0:9:7.47:7,0,236	0/0:10,0:9:18.02:0,18,213	1/1:20,1:20:26.99:184,27,0	0/1:16,0:12:13.41:94,0,13	0/1:16,1:14:32.27:96,0,32	0/1:19,0:16:16.76:17,0,107
chr10	66635530	.	A	AC	1369.66	PASS	AB=1.000;AC=48;AF=0.889;AN=54;BaseQRankSum=-2.979;DP=240;FS=1.382;HRun=1;HaplotypeScore=135.8588;InbreedingCoeff=0.2422;MQ=34.57;MQ0=0;MQRankSum=0.612;QD=5.98;ReadPosRankSum=1.953;VQSLOD=0.7678;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:17:1.07:9,1,0	1/1:9,0:9:2.60:10,3,0	1/1:1,0:1:3:29,3,0	./.	1/1:15,0:15:16.03:161,16,0	0/0:9,0:9:0.90:0,1,4	1/1:3,0:3:2.74:12,3,0	1/1:10,0:9:24.03:228,24,0	1/1:3,0:3:9.01:87,9,0	1/1:15,0:15:11.22:146,11,0	1/1:18,0:18:3.93:33,4,0	1/1:3,0:3:2.97:29,3,0	1/1:10,0:10:17.14:189,17,0	0/1:2,0:2:0.94:1,0,2	1/1:2,0:2:2.74:12,3,0	1/1:5,0:5:0.89:2,1,0	0/0:2,0:2:4.04:0,4,12	1/1:3,0:3:8.22:58,8,0	1/1:5,0:5:12.43:106,12,0	1/1:22,0:22:1.31:4,1,0	1/1:8,0:8:8.34:47,8,0	1/1:8,0:8:0.52:52,1,0	1/1:12,0:12:5.12:21,5,0	1/1:2,6:8:1.25:3,1,0	0/1:31,0:31:6.49:19,0,6	1/1:6,0:6:9.30:83,9,0	1/1:8,0:8:5.75:43,6,0	1/1:5,0:5:10.97:78,11,0
chr10	66635531	.	C	CG	2120.64	PASS	AC=52;AF=0.963;AN=54;BaseQRankSum=-2.872;DP=235;FS=1.624;HRun=1;HaplotypeScore=124.4373;InbreedingCoeff=0.2267;MQ=34.68;MQ0=0;MQRankSum=-0.209;QD=9.10;ReadPosRankSum=0.987;VQSLOD=1.2899;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,17:17:1.07:9,1,0	1/1:1,8:9:2.60:10,3,0	1/1:1,0:1:2.99:24,3,0	./.	1/1:2,13:15:16.32:275,16,0	1/1:1,8:9:0.89:2,1,0	1/1:0,3:3:2.74:12,3,0	1/1:1,9:9:24.08:331,24,0	1/1:0,3:3:9.03:125,9,0	1/1:3,12:15:10.50:213,10,0	1/1:0,18:18:3.94:52,4,0	1/1:0,3:3:2.98:42,3,0	1/1:0,10:10:17.62:277,18,0	1/1:1,1:2:2.96:19,3,0	1/1:0,2:2:2.74:12,3,0	1/1:0,5:5:0.89:2,1,0	0/0:0,2:2:3.78:0,4,11	1/1:1,2:3:8.24:87,8,0	1/1:0,5:5:14.91:173,15,0	1/1:0,22:22:1.31:4,1,0	1/1:0,8:8:8.35:60,8,0	1/1:2,4:6:9.02:115,9,0	1/1:1,10:11:2.71:12,3,0	1/1:7,1:8:2.80:13,3,0	1/1:0,29:29:7.31:30,7,0	1/1:0,6:6:10.37:128,10,0	1/1:0,8:8:5.75:55,6,0	1/1:2,3:5:11.06:120,11,0
chr10	66635535	.	T	TA	1149.78	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-0.423;DP=226;FS=0.000;HRun=2;HaplotypeScore=108.1498;InbreedingCoeff=0.2645;MQ=34.88;MQ0=0;MQRankSum=-1.435;QD=5.20;ReadPosRankSum=1.882;VQSLOD=0.6033;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:17:1.15:9,1,0	1/1:8,0:8:2.60:10,3,0	1/1:4,0:3:0.71:24,1,0	0/0:3,0:2:1.77:0,2,4	1/1:2,11:13:17.25:136,17,0	1/1:8,0:8:0.89:2,1,0	1/1:3,0:3:2.74:12,3,0	1/1:9,0:8:22.55:187,23,0	1/1:0,3:3:8.94:65,9,0	1/1:1,11:12:15.08:131,15,0	1/1:18,0:18:5.91:20,6,0	1/1:2,1:3:2.98:21,3,0	1/1:0,10:10:16.94:149,17,0	1/1:0,1:1:2.98:21,3,0	1/1:2,0:2:2.74:12,3,0	1/1:5,0:5:0.89:2,1,0	0/0:0,2:2:4.04:0,4,11	1/1:0,2:2:5.99:48,6,0	1/1:5,0:5:11.09:77,11,0	1/1:22,0:22:2.49:7,2,0	1/1:8,0:8:5.29:22,5,0	1/1:0,4:4:8.95:67,9,0	1/1:10,0:10:2.74:12,3,0	1/1:6,1:7:2.04:6,2,0	1/1:29,0:29:7.31:29,7,0	1/1:1,5:6:8.53:75,9,0	1/1:8,0:8:4.96:19,5,0	1/1:0,3:3:8.98:74,9,0
chr10	66635663	.	G	GGGGGTT	17785.42	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-0.181;DP=472;FS=178.116;HRun=0;HaplotypeScore=130.3311;InbreedingCoeff=0.9926;MQ=82.20;MQ0=0;MQRankSum=-11.844;QD=66.61;ReadPosRankSum=-2.228;VQSLOD=1.0176;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:96.19:0,96,2001	0/0:10,0:10:27.09:0,27,619	0/0:27,0:27:65.20:0,65,1302	0/0:15,0:14:25.54:0,26,552	1/1:8,8:16:35.79:788,36,0	1/1:4,6:10:30.10:926,30,0	1/1:11,7:18:38.97:921,39,0	0/0:22,0:22:54.16:0,54,1120	1/1:4,4:8:18.06:592,18,0	1/1:11,7:18:41.97:999,42,0	1/1:2,6:8:15.03:518,15,0	1/1:9,10:19:50.79:1313,51,0	0/0:20,0:20:57.20:0,57,1301	1/1:6,8:14:39.04:1138,39,0	1/1:7,12:19:48.14:1511,48,0	1/1:6,10:16:48.05:1357,48,0	1/1:4,7:11:24.04:745,24,0	1/1:9,6:15:30.03:871,30,0	1/1:11,4:15:36.05:843,36,0	1/1:4,10:14:42.11:1220,42,0	1/1:5,5:10:17.99:382,18,0	0/0:23,0:23:60.03:0,60,1106	0/0:30,0:30:81.10:0,81,1694	0/0:22,0:22:60.21:0,60,1359	1/1:10,11:21:59.95:1410,60,0	1/1:9,7:16:38.10:999,38,0	1/1:5,6:11:27.04:712,27,0	1/1:3,5:8:18.04:542,18,0
chr10	66635711	.	A	ATC	12737.48	PASS	AB=0.625;AC=37;AF=0.661;AN=56;BaseQRankSum=7.469;DP=570;FS=8.019;HRun=0;HaplotypeScore=106.9722;InbreedingCoeff=0.9106;MQ=74.84;MQ0=0;MQRankSum=-8.209;QD=36.81;ReadPosRankSum=2.867;VQSLOD=7.1712;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:75.15:0,75,904	0/0:11,0:11:24.08:0,24,300	0/0:22,0:22:41.85:0,42,484	0/0:24,0:23:33.57:0,34,413	1/1:2,18:20:48.16:791,48,0	1/1:3,17:20:45.15:742,45,0	1/1:6,14:20:36.12:573,36,0	0/0:47,0:47:99:0,105,1291	1/1:1,13:14:39.13:643,39,0	1/1:3,13:16:42.07:635,42,0	1/1:1,6:7:21.07:341,21,0	1/1:3,15:19:36:662,36,0	0/0:23,0:23:60.19:0,60,748	1/1:1,13:14:36.12:592,36,0	1/1:3,26:31:72.25:1186,72,0	1/1:3,19:23:16.64:803,17,0	1/1:2,11:13:30.10:495,30,0	1/1:2,26:28:78.22:1258,78,0	1/1:6,18:25:54.14:828,54,0	0/1:4,6:10:19.48:229,0,19	1/1:2,13:15:39.13:644,39,0	0/0:19,0:19:42.12:0,42,511	0/0:23,0:23:57.15:0,57,686	0/0:23,0:23:60.08:0,60,729	1/1:4,18:22:51.17:841,51,0	1/1:5,11:16:36.07:563,36,0	1/1:5,17:21:13.65:745,14,0	1/1:5,6:11:11.99:167,12,0
chr10	66638058	.	G	GA	141.56	PASS	AB=0.962;AC=3;AF=0.058;AN=52;BaseQRankSum=3.165;DP=424;FS=0.000;HRun=8;HaplotypeScore=94.1688;InbreedingCoeff=0.4748;MQ=41.77;MQ0=17;MQRankSum=-1.534;QD=3.08;ReadPosRankSum=-0.838;VQSLOD=-0.6399;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:20:20.90:0,21,192	0/0:7,0:6:5.94:0,6,54	./.	./.	1/1:11,10:21:21.05:232,21,0	0/0:16,0:14:33:0,33,302	0/0:13,0:13:26.99:0,27,247	0/1:24,1:25:0.51:1,0,279	0/0:10,0:10:11.93:0,12,110	0/0:12,0:12:14.99:0,15,134	0/0:15,0:14:14.81:0,15,136	0/0:17,0:16:17.90:0,18,158	0/0:13,0:13:14.83:0,15,137	0/0:18,0:18:14.70:0,15,136	0/0:28,0:28:35.68:0,36,413	0/0:20,0:20:34.39:0,34,326	0/0:20,0:19:11.28:0,11,108	0/0:16,0:14:17.94:0,18,163	0/0:14,0:13:20.98:0,21,192	0/0:12,0:11:24:0,24,218	0/0:6,0:3:3:0,3,27	0/0:16,0:15:17.92:0,18,155	0/0:14,0:11:21:0,21,192	0/0:17,0:17:8.67:0,9,82	0/0:13,0:12:2.89:0,3,27	0/0:14,0:14:26.86:0,27,232	0/0:14,0:14:23.92:0,24,217	0/0:25,0:18:20.93:0,21,192
chr10	66638094	.	AAG	A	4372.98	PASS	AB=1.000;AC=45;AF=0.804;AN=56;BaseQRankSum=-1.139;DP=567;FS=5.686;HRun=0;HaplotypeScore=62.4020;InbreedingCoeff=0.7585;MQ=48.23;MQ0=37;MQRankSum=1.406;QD=9.70;ReadPosRankSum=0.475;VQSLOD=3.8757;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:23,2:23:56.67:468,57,0	1/1:5,0:5:8.94:65,9,0	0/1:58,0:4:0.57:1,0,25	0/0:67,0:14:1.99:0,2,95	1/1:4,11:15:17.91:155,18,0	1/1:14,0:13:2.84:14,3,0	1/1:13,0:13:20.98:181,21,0	1/1:30,0:29:24.16:249,24,0	1/1:14,1:15:32.95:282,33,0	1/1:20,1:19:38.80:324,39,0	1/1:9,9:18:29.64:213,30,0	1/1:16,0:16:2.99:24,3,0	0/0:7,0:7:15.02:0,15,172	1/1:19,0:19:26.97:229,27,0	1/1:29,1:29:5.99:53,6,0	1/1:21,1:22:32.98:283,33,0	1/1:26,0:25:29.86:244,30,0	1/1:5,6:10:5.99:52,6,0	1/1:11,1:11:24.08:187,24,0	1/1:15,0:15:35.70:250,36,0	1/1:7,0:5:11.97:99,12,0	0/0:14,0:13:20.89:0,21,182	0/0:12,0:12:16.77:0,17,134	0/0:16,0:16:14.83:0,15,118	1/1:8,9:16:14.97:142,15,0	1/1:9,23:31:50.85:419,51,0	1/1:18,0:18:26.84:220,27,0	1/1:12,0:12:26.90:220,27,0
chr10	66638095	.	AG	A	4264.05	PASS	AB=1.000;AC=45;AF=0.804;AN=56;BaseQRankSum=-1.642;DP=519;FS=1.571;HRun=1;HaplotypeScore=52.3556;InbreedingCoeff=0.7371;MQ=49.96;MQ0=35;MQRankSum=2.622;QD=10.40;ReadPosRankSum=0.518;VQSLOD=2.5691;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:21:56.35:414,56,0	1/1:5,0:5:8.80:52,9,0	0/1:58,0:4:0.57:1,0,25	0/0:68,0:14:0.16:0,0,96	1/1:14,0:14:18.29:123,18,0	1/1:1,9:9:3.01:32,3,0	1/1:9,2:11:20.86:162,21,0	1/1:25,0:24:40.81:365,41,0	1/1:14,0:14:33.40:283,33,0	1/1:19,1:19:33.90:316,34,0	1/1:16,0:16:29.16:170,29,0	1/1:16,0:16:2.92:18,3,0	0/0:6,0:6:17.50:0,18,152	1/1:15,0:15:27.46:239,27,0	1/1:7,19:25:5.97:57,6,0	1/1:18,0:18:32.64:267,33,0	1/1:23,0:22:28.39:229,28,0	1/1:9,0:8:5.88:36,6,0	1/1:12,0:11:28.74:197,29,0	1/1:13,0:13:35.57:237,36,0	1/1:6,0:6:14.96:122,15,0	0/0:11,0:10:20.67:0,21,164	0/0:10,0:10:16.92:0,17,115	0/0:14,0:14:14.67:0,15,110	1/1:15,0:14:6.79:78,7,0	1/1:29,1:30:42.92:397,43,0	1/1:17,0:17:30.40:246,30,0	1/1:13,0:13:26.88:224,27,0
chr10	66642924	.	C	CT	17629.04	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=10.259;DP=686;FS=7.559;HRun=1;HaplotypeScore=368.9649;InbreedingCoeff=0.9997;MQ=71.94;MQ0=0;MQRankSum=-2.609;QD=39.88;ReadPosRankSum=4.901;VQSLOD=2.2431;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,138,1888	0/0:10,0:10:27.09:0,27,378	0/0:14,0:14:39.13:0,39,543	0/0:20,0:17:54.09:0,54,724	1/1:0,20:20:60.20:904,60,0	1/1:0,19:19:48.16:721,48,0	1/1:0,25:25:66.22:990,66,0	0/0:36,0:36:99:0,105,1449	1/1:0,22:22:63.21:941,63,0	1/1:0,24:24:72.24:1094,72,0	1/1:0,16:16:39.13:586,39,0	1/1:2,23:25:63.21:949,63,0	0/0:28,0:28:78.26:0,78,1090	1/1:0,31:31:81.27:1219,81,0	1/1:0,29:29:78.26:1177,78,0	1/1:1,34:35:96.33:1447,96,0	1/1:0,25:25:53.97:813,54,0	1/1:0,15:15:32.96:539,33,0	1/1:0,20:20:60.14:838,60,0	1/1:0,28:28:78.26:1175,78,0	1/1:0,20:20:42.14:633,42,0	0/0:42,0:42:99:0,120,1673	0/0:28,0:28:75.23:0,75,1014	0/0:18,0:18:44.76:0,45,627	1/1:0,23:23:60.20:904,60,0	1/1:0,20:20:60.19:889,60,0	1/1:0,31:31:87.29:1311,87,0	1/1:3,11:14:33.11:498,33,0
chr10	66643194	.	T	TTTGA	792	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-2.802;DP=810;FS=5.492;HRun=0;HaplotypeScore=127.6292;InbreedingCoeff=0.9574;MQ=71.43;MQ0=0;MQRankSum=-3.006;QD=18.00;ReadPosRankSum=-5.546;VQSLOD=2.0752;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:96.29:0,96,1493	0/0:12,0:12:21.07:0,21,336	0/0:29,0:29:27:0,27,320	0/0:17,0:17:18.05:0,18,253	0/0:27,0:27:57.16:0,57,868	0/0:25,0:25:66.19:0,66,1015	0/0:20,0:20:30.10:0,30,483	1/1:34,6:44:42.58:887,43,0	0/0:23,0:23:39.13:0,39,622	0/0:43,0:43:89.28:0,89,1419	0/0:29,0:29:42.14:0,42,674	0/0:35,0:35:69.24:0,69,1109	0/0:33,0:33:69.22:0,69,1083	0/0:26,0:26:57.19:0,57,910	0/0:34,0:34:60.20:0,60,945	0/0:29,0:29:63.21:0,63,1008	0/0:18,0:18:36.12:0,36,580	0/0:27,0:27:60.20:0,60,958	0/0:24,0:24:42.12:0,42,627	0/0:30,0:30:54.18:0,54,861	0/0:38,0:38:87.30:0,87,1398	0/0:38,0:38:78.18:0,78,1191	0/0:33,0:33:78.27:0,78,1256	0/0:27,0:27:66.21:0,66,1039	0/0:20,0:20:45.12:0,45,674	0/0:36,0:36:81.24:0,81,1237	0/0:39,0:39:87.30:0,87,1398	0/0:8,0:8:12.04:0,12,193
chr10	66644745	.	AG	A	9518.05	PASS	AB=0.786;AC=54;AF=0.964;AN=56;BaseQRankSum=4.545;DP=679;FS=4.622;HRun=1;HaplotypeScore=123.9398;InbreedingCoeff=-0.0418;MQ=78.38;MQ0=0;MQRankSum=0.199;QD=14.02;ReadPosRankSum=6.733;VQSLOD=4.3835;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,32:32:81.61:464,82,0	1/1:0,12:12:6.44:122,6,0	1/1:16,0:16:41.87:203,42,0	0/1:13,0:13:8.44:163,0,8	1/1:1,10:11:4.49:151,4,0	1/1:0,19:19:52.47:305,52,0	1/1:1,36:37:77.32:444,77,0	1/1:1,27:28:76.70:405,77,0	1/1:2,35:37:53.21:493,53,0	1/1:0,26:26:74.27:408,74,0	1/1:0,8:8:20.38:117,20,0	1/1:2,29:31:75.77:416,76,0	1/1:1,18:19:42.56:251,43,0	1/1:0,37:37:99:587,105,0	1/1:0,18:18:40.44:218,40,0	1/1:0,26:26:64.06:377,64,0	1/1:3,21:24:38.42:317,38,0	1/1:1,32:33:89.74:493,90,0	0/1:4,12:16:9.89:142,0,10	1/1:1,9:10:19.88:127,20,0	1/1:0,74:74:99:1095,192,0	1/1:0,16:16:37.97:224,38,0	1/1:0,11:11:32.11:188,32,0	1/1:2,31:33:78.64:440,79,0	1/1:0,25:25:66.69:368,67,0	1/1:1,26:27:52.86:370,53,0	1/1:1,20:21:37.48:331,37,0	1/1:0,19:19:52.50:301,53,0
chr10	66647007	.	CTGTGTATGTGTG	C	9842.89	PASS	AB=0.780;AC=40;AF=0.714;AN=56;BaseQRankSum=8.908;DP=546;FS=1.960;HRun=0;HaplotypeScore=176.8546;InbreedingCoeff=0.6986;MQ=72.07;MQ0=10;MQRankSum=-6.432;QD=25.97;ReadPosRankSum=4.094;VQSLOD=3.9467;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:31,0:33:99:104,0,1110	1/1:9,0:10:6.61:88,7,0	0/0:32,0:17:47.96:0,48,553	0/0:29,0:23:59.54:0,60,674	1/1:3,0:15:5.19:20,5,0	1/1:1,10:11:11.53:322,12,0	1/1:6,19:25:12.04:408,12,0	0/0:29,0:29:78.13:0,78,996	1/1:1,14:20:33.11:1028,33,0	1/1:12,2:16:33.07:601,33,0	1/1:3,15:20:6.02:178,6,0	1/1:2,10:13:18.06:595,18,0	0/0:23,0:23:65.99:0,66,1592	1/1:1,11:13:15.05:492,15,0	1/1:1,15:18:21.04:604,21,0	1/1:4,25:31:1.64:959,2,0	0/1:5,17:23:15.67:582,0,16	1/1:13,3:17:47.88:811,48,0	1/1:3,16:19:46.74:475,47,0	1/1:6,8:14:9.03:270,9,0	1/1:21,0:21:32.03:357,32,0	0/0:16,0:16:21.04:0,21,1000	0/0:18,0:18:38.69:0,39,1202	0/0:20,0:20:44.60:0,45,1762	1/1:3,10:13:3.01:111,3,0	1/1:6,13:19:25.33:437,25,0	1/1:4,13:19:20.77:658,21,0	1/1:2,6:9:20.68:742,21,0
chr10	66647013	.	ATG	A	619.36	PASS	AB=0.959;AC=33;AF=0.589;AN=56;BaseQRankSum=9.154;DP=495;FS=9.222;HRun=0;HaplotypeScore=120.9122;InbreedingCoeff=0.4421;MQ=66.81;MQ0=13;MQRankSum=-7.565;QD=2.04;ReadPosRankSum=5.003;VQSLOD=1.4448;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:31:16.02:0,16,240	0/0:10,0:10:2.48:0,2,23	0/0:29,0:14:3.01:0,3,42	0/0:25,0:19:10.22:0,10,88	1/1:12,0:12:5.68:28,6,0	1/1:12,0:12:5.68:28,6,0	1/1:20,0:19:2.42:22,2,0	0/0:34,0:34:25.11:0,25,168	1/1:19,0:19:23.08:112,23,0	1/1:12,0:12:12.15:56,12,0	1/1:17,0:17:2.65:13,3,0	0/1:12,0:12:2.31:39,0,2	0/0:23,0:23:27.07:0,27,381	1/1:13,0:13:11.36:56,11,0	1/1:18,0:18:14.47:69,14,0	1/1:30,0:29:1.25:67,1,0	1/1:22,0:22:7.16:36,7,0	1/1:16,0:16:7.83:35,8,0	0/1:17,0:17:8.14:8,0,18	0/1:9,0:9:7.31:8,0,7	0/0:17,0:17:7.35:0,7,53	0/0:7,0:7:18.06:0,18,271	0/1:14,1:16:13.03:13,0,211	0/1:19,4:23:58.42:58,0,420	1/1:10,0:10:2.84:14,3,0	0/0:14,0:14:10.68:0,11,66	1/1:16,0:16:12.01:52,12,0	1/1:10,0:10:18.60:88,19,0
chr10	66648247	.	C	CG	345.63	PASS	AB=0.944;AC=6;AF=0.107;AN=56;BaseQRankSum=7.347;DP=689;FS=5.440;HRun=9;HaplotypeScore=88.2886;InbreedingCoeff=0.7060;MQ=79.13;MQ0=0;MQRankSum=-1.193;QD=4.61;ReadPosRankSum=0.466;VQSLOD=0.7748;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:28:68.97:359,69,0	1/1:13,0:13:20.13:105,20,0	0/1:14,1:16:4.31:4,0,168	0/0:19,0:18:32.55:0,33,250	0/0:26,0:26:53.93:0,54,462	0/0:14,0:14:23.97:0,24,208	0/0:22,0:22:54.43:0,54,466	0/0:24,0:24:32.93:0,33,286	0/0:33,0:33:68.94:0,69,598	0/0:24,0:24:51.85:0,52,444	0/0:12,0:12:20.97:0,21,182	0/0:20,0:21:49.99:0,50,416	0/0:30,0:30:62.94:0,63,546	0/0:24,0:24:47.94:0,48,412	0/0:44,1:45:71.77:0,72,851	0/0:26,1:27:26.78:0,27,462	0/0:27,0:27:56.94:0,57,489	0/0:26,0:27:67.97:0,68,570	0/0:27,0:27:68.98:0,69,599	0/1:17,1:18:3.21:3,0,204	0/0:50,0:50:99:0,120,1036	0/0:20,0:20:38.96:0,39,335	0/0:15,0:15:32.98:0,33,286	0/0:45,0:45:99:0,114,982	0/0:19,0:19:38.91:0,39,335	0/0:30,0:30:59.96:0,60,520	0/0:25,0:25:62.94:0,63,546	0/0:8,0:8:20.99:0,21,182
chr10	66648256	.	G	GGA	1634.61	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-7.615;DP=665;FS=9.689;HRun=0;HaplotypeScore=83.9832;InbreedingCoeff=0.9972;MQ=78.05;MQ0=0;MQRankSum=-1.454;QD=33.36;ReadPosRankSum=1.888;VQSLOD=5.7933;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,34:35:75.25:1344,75,0	1/1:0,14:14:24.05:412,24,0	0/0:14,0:14:35.08:0,35,389	0/0:18,0:17:39.06:0,39,471	0/0:27,0:27:72.34:0,72,873	0/0:9,0:9:27.08:0,27,367	0/0:19,0:19:57.15:0,57,774	0/0:30,0:30:86.96:0,87,922	0/0:33,0:33:93.10:0,93,1160	0/0:27,0:27:75.17:0,75,938	0/0:11,0:11:27.08:0,27,363	0/0:19,0:19:57.07:0,57,730	0/0:26,0:26:75.17:0,75,977	0/0:24,0:24:69.11:0,69,838	0/0:37,0:37:99:0,107,1485	0/0:25,0:25:70.91:0,71,911	0/0:23,0:23:69.12:0,69,873	0/0:24,0:24:72.16:0,72,967	0/0:28,0:28:81.23:0,81,1090	0/0:13,0:13:38.12:0,38,464	0/0:50,0:49:99:0,147,1906	0/0:16,0:16:48.12:0,48,624	0/0:15,0:15:42.11:0,42,547	0/0:40,0:40:99:0,120,1646	0/0:20,0:20:53.95:0,54,671	0/0:30,0:30:80.79:0,81,1024	0/0:29,0:29:83.95:0,84,1043	0/0:9,0:9:27.06:0,27,347
chr10	66649392	.	T	TG	1908.73	PASS	AB=1.000;AC=41;AF=0.759;AN=54;BaseQRankSum=4.381;DP=391;FS=4.938;HRun=10;HaplotypeScore=71.6378;InbreedingCoeff=0.6629;MQ=69.30;MQ0=2;MQRankSum=0.942;QD=6.34;ReadPosRankSum=-0.366;VQSLOD=1.4960;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:24:14.30:73,14,0	1/1:2,0:2:2.88:15,3,0	0/1:15,0:10:4.76:5,0,100	0/0:21,0:13:21.20:0,21,149	1/1:12,0:12:20.33:114,20,0	1/1:9,1:10:8.66:50,9,0	1/1:27,0:27:27.62:194,28,0	0/0:14,0:14:17.69:0,18,134	1/1:15,0:15:17.35:103,17,0	1/1:7,0:7:14.26:72,14,0	1/1:3,0:3:2.88:15,3,0	1/1:15,1:16:11.72:81,12,0	0/0:12,0:12:22.79:0,23,179	1/1:18,0:19:18.57:96,19,0	1/1:11,0:11:20.31:122,20,0	1/1:10,1:11:17.38:99,17,0	1/1:22,1:23:31.61:193,32,0	1/1:24,0:24:40.64:254,41,0	1/1:5,0:5:3:29,3,0	1/1:8,0:8:5.68:28,6,0	1/1:35,1:37:49:282,49,0	0/0:7,0:7:5.98:0,6,49	0/0:5,0:5:2.99:0,3,25	0/0:24,1:28:3.03:0,3,349	1/1:10,0:10:5.98:49,6,0	1/1:5,0:4:7.13:49,7,0	1/1:14,1:15:26.14:155,26,0	./.
chr10	66649402	.	G	GGA	5449.88	PASS	AC=40;AF=0.741;AN=54;BaseQRankSum=-2.343;DP=367;FS=7.248;HRun=0;HaplotypeScore=51.5084;InbreedingCoeff=0.8459;MQ=70.32;MQ0=2;MQRankSum=-0.596;QD=20.34;ReadPosRankSum=0.051;VQSLOD=4.2641;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,3:20:14.84:192,15,0	1/1:3,0:3:6.01:65,6,0	0/0:18,0:11:14.62:0,15,263	0/0:20,0:12:16.43:0,16,280	1/1:0,7:12:23.72:269,24,0	1/1:2,0:10:8.84:111,9,0	1/1:2,21:29:21.98:509,22,0	0/0:16,0:15:33.05:0,33,381	1/1:0,8:11:17.78:284,18,0	1/1:0,8:9:26.83:295,27,0	1/1:0,2:2:3.01:55,3,0	1/1:2,10:13:11.35:146,11,0	0/0:15,0:15:34.62:0,35,401	1/1:3,14:18:25.46:358,25,0	1/1:0,7:10:20.86:298,21,0	1/1:1,12:16:17.85:250,18,0	1/1:2,20:24:32.49:504,32,0	1/1:0,15:19:41.82:621,42,0	1/1:6,0:6:14.96:120,15,0	1/1:0,0:4:11.86:98,12,0	1/1:3,21:32:45.41:612,45,0	0/0:4,0:4:8.76:0,9,95	0/0:1,0:1:3.01:0,3,42	0/0:25,0:25:67.09:0,67,803	1/1:0,1:11:5.91:65,6,0	1/1:4,1:5:14.77:153,15,0	1/1:1,11:13:26.98:446,27,0	./.
chr10	66649403	.	A	AG	869.12	PASS	AB=0.982;AC=31;AF=0.574;AN=54;BaseQRankSum=3.090;DP=365;FS=1.219;HRun=10;HaplotypeScore=62.0771;InbreedingCoeff=0.5814;MQ=69.13;MQ0=2;MQRankSum=-0.458;QD=3.44;ReadPosRankSum=0.770;VQSLOD=-0.6558;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:20:2.75:28,3,0	1/1:3,0:3:5.86:38,6,0	0/0:17,0:10:23.76:0,24,224	0/0:20,0:12:30.36:0,30,269	0/1:12,0:12:4.88:54,0,5	1/1:9,1:10:5.91:45,6,0	1/1:28,0:28:25.94:133,26,0	0/0:16,0:15:33.05:0,33,351	1/1:11,0:11:11.31:57,11,0	0/1:9,0:9:0.07:41,0,0	0/0:2,0:2:1.25:0,1,3	1/1:13,0:13:4.51:18,5,0	0/0:16,0:16:33.03:0,33,341	0/1:17,1:18:8.29:56,0,8	1/1:10,0:10:14.83:72,15,0	1/1:15,1:16:12.32:88,12,0	1/1:24,0:24:10.25:68,10,0	1/1:19,0:19:9.73:69,10,0	0/0:5,0:5:3.18:0,3,8	1/1:4,0:4:7.23:43,7,0	1/1:31,1:32:20.39:101,20,0	0/0:4,0:4:8.61:0,9,74	0/0:1,0:1:3.01:0,3,32	0/0:25,0:25:68.91:0,69,691	1/1:11,0:11:2.64:13,3,0	0/0:6,0:5:1.81:0,2,6	1/1:12,1:13:19.56:121,20,0	./.
chr10	66650394	.	AG	A	7591.70	PASS	AB=1.000;AC=43;AF=0.768;AN=56;BaseQRankSum=5.469;DP=510;FS=6.515;HRun=10;HaplotypeScore=56.2486;InbreedingCoeff=0.8046;MQ=72.24;MQ0=1;MQRankSum=-0.352;QD=18.16;ReadPosRankSum=4.078;VQSLOD=5.5245;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,26:29:68.98:599,69,0	1/1:2,5:7:11.97:104,12,0	0/0:4,0:5:2.70:0,3,33	0/1:16,0:15:1.22:1,0,74	1/1:1,6:7:18:156,18,0	1/1:5,9:14:20.99:182,21,0	1/1:4,27:31:35.80:540,36,0	0/0:19,1:20:4.01:0,4,262	1/1:2,10:12:32.99:285,33,0	1/1:6,6:12:15.45:131,15,0	1/1:2,2:4:9:78,9,0	1/1:5,18:23:50.98:443,51,0	0/0:21,1:22:28.08:0,28,528	1/1:2,25:28:77.02:657,77,0	1/1:1,27:28:68.99:599,69,0	1/1:4,23:27:65.98:573,66,0	1/1:1,23:24:68.99:599,69,0	1/1:5,28:33:65.98:573,66,0	1/1:2,17:18:44.97:390,45,0	1/1:1,9:10:23.58:208,24,0	1/1:9,21:29:29.69:418,30,0	0/0:14,1:15:4.01:0,4,261	0/0:7,0:8:17.87:0,18,173	0/0:22,0:22:48.13:0,48,531	1/1:5,12:17:26.98:234,27,0	1/1:2,7:12:22.06:168,22,0	1/1:2,28:30:69.44:600,69,0	1/1:2,3:5:6:52,6,0
chr10	66651554	.	CTGTGTGTGTGTGTGTGCCTGTG	C	7972.72	PASS	AB=0.988;AC=38;AF=0.704;AN=54;BaseQRankSum=5.964;DP=751;FS=0.000;HRun=0;HaplotypeScore=284.0155;InbreedingCoeff=0.5225;MQ=46.83;MQ0=43;MQRankSum=-4.725;QD=13.99;ReadPosRankSum=0.283;VQSLOD=3.0719;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:24:37.16:37,0,42	0/0:6,0:5:2.33:0,2,25	./.	0/1:18,0:9:0:0,0,0	1/1:4,0:16:9.50:130,10,0	1/1:10,15:24:6.49:221,6,0	1/1:24,0:22:11.41:185,11,0	0/0:36,0:31:9.46:0,9,1010	1/1:6,21:25:15.52:740,16,0	0/1:25,0:20:99:569,0,166	1/1:2,8:10:9.47:145,9,0	1/1:9,31:39:11.01:474,11,0	0/0:25,0:24:39.13:0,39,2222	1/1:7,24:32:9.30:412,9,0	1/1:8,24:32:8.54:528,9,0	1/1:30,5:34:38.62:1184,39,0	1/1:14,20:34:23.93:544,24,0	1/1:11,25:35:6.02:266,6,0	1/1:8,7:10:21.03:573,21,0	1/1:5,1:6:3.01:176,3,0	0/1:79,0:73:99:540,0,290	0/0:27,0:26:48.06:0,48,2853	0/0:17,0:16:33.10:0,33,2202	0/0:51,0:49:99:0,116,6734	1/1:7,19:25:7.27:142,7,0	1/1:23,0:19:12.16:459,12,0	1/1:22,0:23:30.10:561,30,0	1/1:7,0:7:4.25:87,4,0
chr10	66651570	.	GCC	G	4294.40	PASS	AB=0.897;AC=38;AF=0.731;AN=52;BaseQRankSum=6.506;DP=676;FS=12.891;HRun=2;HaplotypeScore=149.5625;InbreedingCoeff=0.2437;MQ=45.50;MQ0=42;MQRankSum=-2.688;QD=7.42;ReadPosRankSum=-1.591;VQSLOD=0.1747;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:29,1:25:6.54:95,0,7	0/1:4,2:5:0.18:0,0,0	./.	./.	1/1:18,0:16:7.83:73,8,0	1/1:18,5:22:5.72:38,6,0	1/1:15,7:20:14.26:202,14,0	0/1:28,3:26:51.75:52,0,770	1/1:25,1:24:17.69:128,18,0	0/1:10,16:21:33.49:555,0,33	1/1:9,1:10:8.48:64,8,0	1/1:34,2:35:11.37:76,11,0	0/0:20,0:19:46.89:0,47,731	1/1:25,2:27:8.07:37,8,0	1/1:26,0:26:14.79:122,15,0	1/1:21,11:30:28.31:301,28,0	1/1:26,1:26:20.81:232,21,0	0/1:27,1:27:29.87:56,0,30	0/1:18,0:14:99:126,0,148	1/1:8,4:12:9.80:93,10,0	1/1:61,15:68:1.68:763,2,0	0/1:24,1:24:1.82:2,0,761	0/0:15,0:14:33.07:0,33,560	0/0:51,1:49:90.28:0,90,1709	1/1:25,0:22:4.37:51,4,0	1/1:18,9:23:37.34:702,37,0	1/1:10,8:18:31.56:396,32,0	0/1:9,0:9:26.13:131,0,26
chr10	66651572	.	CTGTG	C	2435.67	PASS	AB=0.934;AC=34;AF=0.654;AN=52;BaseQRankSum=4.865;DP=686;FS=4.034;HRun=0;HaplotypeScore=170.9065;InbreedingCoeff=0.3423;MQ=45.31;MQ0=44;MQRankSum=-2.624;QD=4.67;ReadPosRankSum=-2.668;VQSLOD=1.9634;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:24,1:24:14.33:23,0,14	0/0:6,0:6:5.58:0,6,38	./.	./.	0/0:18,0:16:1.31:0,1,4	1/1:23,0:22:5.96:74,6,0	1/1:16,5:19:3.29:14,3,0	0/0:31,0:28:21.79:0,22,152	1/1:26,0:24:15.03:152,15,0	1/1:26,0:21:1.28:156,1,0	1/1:10,0:10:3.01:35,3,0	1/1:36,0:35:10.68:96,11,0	0/1:17,1:19:11.89:12,0,591	1/1:27,0:27:9.01:106,9,0	1/1:27,0:27:16.37:129,16,0	1/1:27,5:30:32.51:350,33,0	0/1:28,0:26:5.23:49,0,5	0/1:29,0:27:0.48:26,0,0	0/1:18,0:15:15.83:96,0,16	1/1:13,1:14:24:325,24,0	1/1:70,4:66:5.28:203,5,0	0/0:24,0:24:16.76:0,17,507	0/0:14,0:14:24.07:0,24,503	0/0:50,0:49:34.04:0,34,1518	1/1:24,1:22:5.30:51,5,0	0/1:26,2:24:66.94:323,0,67	1/1:17,1:18:12.02:164,12,0	1/1:9,0:9:15.04:217,15,0
chr10	66652638	.	TTC	T	211.81	PASS	AB=0.989;AC=14;AF=0.318;AN=44;BaseQRankSum=1.919;DP=644;FS=0.000;HRun=0;HaplotypeScore=134.4960;InbreedingCoeff=-0.0553;MQ=73.84;MQ0=12;MQRankSum=2.832;QD=0.83;ReadPosRankSum=1.557;VQSLOD=2.4827;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:25:0.14:0,0,0	./.	./.	0/0:53,0:30:0:0,0,0	1/1:14,0:18:3.01:31,3,0	0/1:25,0:25:15.29:15,0,60	0/1:23,0:23:6.72:7,0,82	./.	0/0:18,0:18:2.27:0,2,40	0/0:26,0:26:0.77:0,1,48	./.	0/1:33,0:33:8.38:8,0,49	0/0:27,0:27:2.43:0,2,23	0/0:18,0:18:11.97:0,12,97	0/1:22,0:22:0.32:0,0,16	1/1:22,8:30:21.01:206,21,0	0/0:20,0:21:3.01:0,3,40	0/1:12,0:12:13.87:14,0,20	0/0:22,0:22:9:0,9,92	0/0:10,0:10:0.47:0,0,1	0/0:31,0:28:5.09:0,5,19	./.	./.	0/1:25,0:24:10.43:10,0,82	0/1:22,1:23:14.56:15,0,29	0/0:27,0:27:4.22:0,4,24	0/1:18,1:19:19.85:23,0,20	0/0:13,0:14:5.75:0,6,41
chr10	66655379	.	C	CGT	1885.65	PASS	AB=1.000;AC=37;AF=0.712;AN=52;BaseQRankSum=4.990;DP=591;FS=1.486;HRun=0;HaplotypeScore=92.0461;InbreedingCoeff=0.4456;MQ=63.23;MQ0=26;MQRankSum=1.705;QD=4.42;ReadPosRankSum=0.263;VQSLOD=2.1515;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:22:7.92:0,8,193	0/0:14,0:13:8.94:0,9,65	./.	./.	0/1:17,0:17:2.94:121,0,3	1/1:20,0:19:20.91:166,21,0	1/1:35,0:33:23.94:193,24,0	0/1:24,0:23:11.63:12,0,56	1/1:16,0:16:19.03:138,19,0	1/1:30,0:28:2.33:110,2,0	1/1:13,1:15:5.91:38,6,0	1/1:23,0:22:23.50:173,24,0	0/1:13,0:13:2.42:2,0,58	1/1:13,0:13:8.97:71,9,0	1/1:22,0:21:12.87:120,13,0	0/1:25,0:24:18.77:168,0,19	1/1:25,0:23:17.97:121,18,0	1/1:11,0:10:11.91:88,12,0	1/1:15,0:14:12.63:123,13,0	1/1:21,0:21:8.99:74,9,0	1/1:32,0:28:5.96:45,6,0	0/0:17,0:15:14.94:0,15,116	0/0:20,0:20:14.91:0,15,113	0/0:25,0:25:6.90:0,7,185	1/1:18,0:18:11.99:101,12,0	0/1:20,0:20:9.21:34,0,9	1/1:17,0:16:9.40:75,9,0	1/1:9,6:14:6.49:83,6,0
chr10	66655415	.	TGAGAGA	T	225.78	PASS	AB=0.971;AC=16;AF=0.333;AN=48;BaseQRankSum=0.071;DP=458;FS=21.378;HRun=0;HaplotypeScore=116.8668;InbreedingCoeff=0.1202;MQ=39.85;MQ0=23;MQRankSum=-1.463;QD=1.08;ReadPosRankSum=0.050;VQSLOD=0.5753;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:20:12.01:0,12,221	0/0:10,0:8:7.21:0,7,84	./.	./.	0/0:17,0:18:0.47:0,0,2	0/1:22,0:22:1.69:2,0,26	0/0:26,0:23:2.74:0,3,36	./.	1/1:16,0:16:4.04:18,4,0	0/1:20,1:21:25.16:42,0,25	0/0:8,1:9:5.89:0,6,37	0/1:23,0:22:5.14:5,0,28	0/0:13,0:12:8.99:0,9,99	0/0:16,0:16:0.47:0,0,2	0/0:21,0:20:0.47:0,0,1	0/0:22,0:20:5.73:0,6,34	1/1:17,1:17:2.72:55,3,0	1/1:8,1:7:3.01:49,3,0	0/0:15,0:13:5.93:0,6,45	0/0:11,0:13:2.90:0,3,16	1/1:25,0:20:2.53:16,3,0	./.	1/1:13,0:13:2.99:23,3,0	0/1:26,0:22:32.52:33,0,148	0/0:14,0:14:3.01:0,3,63	0/1:19,1:19:52.14:52,0,89	0/1:13,0:12:7.34:59,0,7	0/0:9,0:8:6.29:0,6,34
chr10	66655476	.	A	AG	3566.14	PASS	AB=0.705;AC=29;AF=0.518;AN=56;BaseQRankSum=11.202;DP=648;FS=4.401;HRun=1;HaplotypeScore=128.9635;InbreedingCoeff=0.3860;MQ=48.55;MQ0=25;MQRankSum=-2.758;QD=10.49;ReadPosRankSum=4.303;VQSLOD=2.0261;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:49.11:0,49,258	0/0:12,0:12:28.41:0,28,140	0/0:54,0:14:30.76:0,31,360	0/0:105,0:30:31.94:0,32,524	1/1:10,11:20:12.71:175,13,0	1/1:7,9:16:13.24:253,13,0	1/1:5,15:20:18.33:266,18,0	0/0:30,0:30:75.03:0,75,334	0/1:11,9:20:2.27:220,0,2	0/1:13,10:21:72.87:241,0,73	1/1:7,6:13:10.78:76,11,0	1/1:7,12:19:16.79:243,17,0	0/0:21,0:21:60.07:0,60,760	0/1:12,6:18:20.05:95,0,20	1/1:8,10:17:16.82:189,17,0	1/1:6,10:16:13.21:224,13,0	1/1:6,10:19:27.33:261,27,0	0/1:7,8:14:70.03:125,0,70	0/1:11,5:16:34.13:154,0,34	0/1:6,7:12:3.16:83,0,3	1/1:7,18:25:26.02:297,26,0	0/0:22,0:21:54.17:0,54,736	0/0:13,0:13:36.12:0,36,489	0/0:27,1:28:64.96:0,65,1052	1/1:6,9:15:29.64:242,30,0	0/1:11,11:21:99:209,0,141	0/1:9,6:14:34.67:106,0,35	0/1:11,5:15:29.96:107,0,30
chr10	66655477	.	A	AG	3620.76	PASS	AB=0.704;AC=29;AF=0.518;AN=56;BaseQRankSum=10.698;DP=655;FS=2.631;HRun=0;HaplotypeScore=131.2445;InbreedingCoeff=0.3638;MQ=48.60;MQ0=23;MQRankSum=-0.592;QD=10.56;ReadPosRankSum=4.792;VQSLOD=4.1982;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:49.21:0,49,258	0/0:13,0:13:28.41:0,28,140	0/0:52,1:14:32.02:0,32,368	0/0:105,0:30:13.81:0,14,492	1/1:9,11:20:13.33:176,13,0	1/1:7,9:16:13.05:238,13,0	1/1:5,15:20:18.22:265,18,0	0/0:30,0:30:51.39:0,51,312	0/1:11,9:20:35.77:184,0,36	0/1:13,10:21:51.06:295,0,51	1/1:7,6:13:10.77:76,11,0	1/1:10,12:22:27.11:256,27,0	0/0:21,0:21:46.16:0,46,733	0/1:12,6:18:19.86:95,0,20	1/1:8,10:17:16.81:189,17,0	1/1:6,10:16:35.97:304,36,0	1/1:9,10:19:40.12:278,40,0	0/1:7,8:14:54.14:128,0,54	0/1:10,5:15:84.70:85,0,94	0/1:6,7:12:2.86:83,0,3	1/1:9,18:27:26.05:297,26,0	0/0:23,0:22:57.17:0,57,763	0/0:13,0:13:36.12:0,36,489	0/0:27,1:28:64.90:0,65,1049	1/1:6,9:15:29.64:242,30,0	0/1:11,11:21:99:209,0,135	0/1:9,6:14:19.95:130,0,20	0/1:11,5:15:44.69:90,0,45
chr10	66656295	.	CTTTTTTTTTT	C	20030.47	PASS	AB=0.548;AC=37;AF=0.661;AN=56;BaseQRankSum=5.467;DP=692;FS=1.666;HRun=16;HaplotypeScore=205.7078;InbreedingCoeff=0.8955;MQ=55.45;MQ0=7;MQRankSum=-11.251;QD=42.35;ReadPosRankSum=8.751;VQSLOD=0.7737;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:39:87.26:0,87,2277	0/0:1,0:2:6.01:0,6,108	0/0:31,0:12:27.31:0,27,455	0/0:24,0:11:20.76:0,21,387	1/1:7,14:21:17.65:297,18,0	1/1:3,26:29:72.16:1974,72,0	1/1:1,19:20:48.13:1285,48,0	0/0:14,0:33:66.72:0,67,1830	1/1:3,14:17:36.03:1004,36,0	1/1:9,24:33:65.97:1569,66,0	1/1:5,15:20:33:885,33,0	1/1:6,23:29:45.04:1221,45,0	0/0:18,0:22:54.19:0,54,2038	1/1:3,23:26:51.10:1423,51,0	1/1:5,35:40:72.06:2009,72,0	1/1:7,18:25:35.75:1004,36,0	0/1:6,28:34:47.60:577,0,48	1/1:9,15:24:17.66:502,18,0	1/1:6,13:19:38.86:603,39,0	1/1:7,21:28:42.59:1106,43,0	1/1:3,7:11:14.98:337,15,0	0/0:16,0:24:51.08:0,51,1763	0/0:19,0:20:57.20:0,57,2367	0/0:24,0:24:66.23:0,66,2782	1/1:5,19:24:35.96:1004,36,0	1/1:9,19:27:56.91:1425,57,0	1/1:6,28:34:51.11:1386,51,0	1/1:1,10:11:14.99:419,15,0
chr10	66657567	.	GT	G	3702.27	PASS	AB=0.987;AC=47;AF=0.839;AN=56;BaseQRankSum=6.917;DP=595;FS=0.544;HRun=1;HaplotypeScore=100.0344;InbreedingCoeff=-0.1902;MQ=74.56;MQ0=0;MQRankSum=-2.803;QD=6.22;ReadPosRankSum=10.499;VQSLOD=-0.6283;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:41,1:42:28.48:266,28,0	0/1:7,0:7:9:27,0,9	0/1:15,0:15:56.23:56,0,89	0/1:16,0:16:19.61:20,0,142	1/1:14,0:14:9.59:55,10,0	1/1:26,0:26:59.97:231,60,0	0/1:39,0:39:31.73:161,0,32	0/1:31,0:31:9.62:99,0,10	1/1:16,0:16:14.23:118,14,0	0/1:18,0:18:40.02:40,0,72	1/1:14,0:14:30.34:110,30,0	1/1:28,0:28:40.44:241,40,0	1/1:20,1:21:42.98:203,43,0	0/1:19,2:21:2.99:170,0,3	1/1:24,1:25:29.59:190,30,0	1/1:17,1:18:38.79:168,39,0	1/1:29,0:29:21.34:176,21,0	1/1:13,0:13:3.74:67,4,0	0/1:18,0:18:18.83:67,0,19	1/1:16,0:16:9.31:94,9,0	0/1:37,1:38:82.74:145,0,83	1/1:17,1:18:41.53:179,42,0	1/1:14,0:14:32.85:144,33,0	1/1:29,0:29:36.87:189,37,0	1/1:19,0:19:13.73:104,14,0	1/1:21,0:21:16.13:120,16,0	1/1:18,0:17:20.52:144,21,0	1/1:10,1:11:27.49:117,27,0
chr10	66659080	.	C	CTG	28806.29	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-15.110;DP=800;FS=0.708;HRun=0;HaplotypeScore=75.5449;InbreedingCoeff=0.9995;MQ=84.48;MQ0=3;MQRankSum=-6.900;QD=45.01;ReadPosRankSum=3.351;VQSLOD=6.5177;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,39:40:96.33:1727,96,0	1/1:0,12:12:33.11:594,33,0	0/0:29,0:29:69.20:0,69,911	0/0:27,0:27:68.73:0,69,874	1/1:4,25:29:72.25:1292,72,0	1/1:1,23:24:63.22:1133,63,0	1/1:1,22:23:63.22:1134,63,0	1/1:1,42:43:99:2173,126,0	1/1:2,33:36:87.30:1565,87,0	1/1:0,22:22:63.22:1123,63,0	1/1:1,25:26:63.22:1132,63,0	1/1:3,28:30:69.24:1241,69,0	0/0:26,0:26:75.24:0,75,1033	1/1:2,31:34:84.29:1493,84,0	1/1:2,32:34:84.29:1501,84,0	1/1:2,27:29:75.26:1350,75,0	1/1:1,31:31:72.25:1296,72,0	1/1:3,11:14:24.08:432,24,0	1/1:6,17:24:57.13:934,57,0	1/1:3,23:26:69.24:1232,69,0	1/1:5,33:37:87.30:1545,87,0	0/0:29,0:29:84.27:0,84,1153	0/0:21,0:21:60.18:0,60,818	0/0:28,0:28:78.26:0,78,1092	1/1:1,22:23:63.22:1133,63,0	1/1:4,37:42:99:1976,114,0	1/1:4,34:38:99:1775,99,0	1/1:0,19:19:57.20:1025,57,0
chr10	66659257	.	CA	C	19270.81	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=7.224;DP=692;FS=1.608;HRun=2;HaplotypeScore=71.6508;InbreedingCoeff=0.9990;MQ=86.80;MQ0=0;MQRankSum=-7.775;QD=34.91;ReadPosRankSum=2.540;VQSLOD=5.4144;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,26:26:72.23:935,72,0	1/1:1,9:10:27.09:350,27,0	0/0:24,0:25:72.20:0,72,992	0/0:25,0:25:57.57:0,58,857	1/1:0,16:16:45.15:584,45,0	1/1:0,16:16:42.14:545,42,0	1/1:0,28:28:69.22:896,69,0	1/1:4,42:46:99:1568,123,0	1/1:0,27:27:75.03:973,75,0	1/1:0,19:19:51.08:643,51,0	1/1:0,11:11:24.08:312,24,0	1/1:1,29:30:87.28:1129,87,0	0/0:26,0:26:78.26:0,78,1165	1/1:2,29:31:84.27:1091,84,0	1/1:1,35:36:93.30:1207,93,0	1/1:0,37:37:99:1363,105,0	1/1:2,31:33:75.24:974,75,0	1/1:0,23:23:63.20:818,63,0	1/1:0,24:24:72.23:935,72,0	1/1:1,21:22:60.20:779,60,0	1/1:1,42:43:99:1519,117,0	0/0:20,0:20:60.20:0,60,898	0/0:18,0:18:48.14:0,48,679	0/0:25,0:25:72.24:0,72,1079	1/1:0,17:17:48.16:623,48,0	1/1:1,20:21:60.20:779,60,0	1/1:1,27:28:72.23:935,72,0	1/1:0,8:8:24.08:312,24,0
chr10	66661156	.	C	CCT	22483.21	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-15.431;DP=639;FS=2.804;HRun=0;HaplotypeScore=64.1471;InbreedingCoeff=0.9990;MQ=78.20;MQ0=0;MQRankSum=-2.410;QD=50.07;ReadPosRankSum=1.003;VQSLOD=5.6978;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,126,1854	0/0:11,0:11:33.11:0,33,485	0/0:14,0:14:25.78:0,26,421	0/0:14,0:14:32.99:0,33,395	1/1:0,13:13:39.13:727,39,0	1/1:0,23:23:66.23:1236,66,0	1/1:2,23:25:72.20:1294,72,0	0/0:25,0:25:72.23:0,72,1043	1/1:0,25:25:69.24:1292,69,0	1/1:1,17:18:51.17:943,51,0	1/1:1,26:27:72.25:1349,72,0	1/1:0,29:30:87.30:1629,87,0	0/0:20,0:20:57.19:0,57,839	1/1:2,23:25:69.24:1292,69,0	1/1:0,23:24:63.22:1180,63,0	1/1:0,23:24:57.20:1068,57,0	1/1:2,26:28:75.26:1405,75,0	1/1:2,23:25:66.23:1236,66,0	1/1:3,22:26:72.20:1271,72,0	1/1:3,14:17:42.14:787,42,0	1/1:3,41:44:99:2189,117,0	0/0:20,0:20:60.20:0,60,883	0/0:18,0:18:54.16:0,54,757	0/0:25,0:25:75.24:0,75,1086	1/1:3,23:27:66.21:1204,66,0	1/1:1,15:16:45.15:831,45,0	1/1:2,20:22:63.22:1156,63,0	1/1:2,7:9:21.07:393,21,0
chr10	66664725	.	TA	T	6475.60	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=11.353;DP=391;FS=6.590;HRun=8;HaplotypeScore=36.1971;InbreedingCoeff=0.9601;MQ=62.93;MQ0=0;MQRankSum=2.529;QD=23.46;ReadPosRankSum=2.605;VQSLOD=5.0168;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:57.17:0,57,689	0/0:5,0:5:15.05:0,15,181	0/0:5,0:4:6.02:0,6,72	0/0:8,0:6:9:0,9,94	1/1:4,28:32:78.12:753,78,0	1/1:1,14:15:36.06:348,36,0	1/1:3,12:15:30.05:290,30,0	0/0:30,0:30:81.22:0,81,956	1/1:0,7:7:21.03:203,21,0	1/1:1,8:9:23.99:222,24,0	1/1:2,10:12:27.04:261,27,0	1/1:2,14:16:39.06:377,39,0	0/0:9,0:9:24.05:0,24,267	1/1:0,14:14:42.07:406,42,0	1/1:2,15:17:39.06:377,39,0	1/1:3,10:13:18.02:173,18,0	1/1:2,7:9:21.03:203,21,0	1/1:1,14:15:42.07:406,42,0	1/1:2,15:17:45.07:435,45,0	1/1:2,14:16:41.84:369,42,0	1/1:1,12:13:36.06:348,36,0	0/0:8,0:8:24.07:0,24,280	0/0:14,0:14:33.10:0,33,399	0/0:11,0:11:24.07:0,24,290	1/1:0,12:12:27.04:261,27,0	1/1:1,18:19:54.07:516,54,0	1/1:4,11:15:30.04:290,30,0	1/1:1,9:10:10.18:241,10,0
chr10	66665328	.	C	CAAAAAACAAAA	16555.32	PASS	AB=0.747;AC=40;AF=0.714;AN=56;BaseQRankSum=3.151;DP=589;FS=28.867;HRun=0;HaplotypeScore=223.2312;InbreedingCoeff=0.5651;MQ=70.57;MQ0=0;MQRankSum=-9.836;QD=37.63;ReadPosRankSum=-3.704;VQSLOD=2.7332;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:12,0:29:64.24:64,0,136	0/1:5,0:16:47.37:47,0,285	0/0:29,0:17:20.86:0,21,219	0/0:24,0:17:7.68:0,8,78	0/1:24,0:23:67.35:716,0,67	1/1:17,0:17:15.05:610,15,0	1/1:10,0:9:5.99:270,6,0	0/1:16,0:23:83.69:84,0,201	1/1:18,0:17:44.58:1019,45,0	1/1:12,1:18:41.74:908,42,0	1/1:16,0:16:14.89:377,15,0	1/1:17,0:17:34.80:1127,35,0	0/0:20,0:23:11.65:0,12,475	1/1:18,0:16:15.68:533,16,0	1/1:28,0:28:74.25:1189,74,0	1/1:30,0:27:68.94:1524,69,0	1/1:16,0:16:26.74:395,27,0	1/1:12,0:12:26.82:425,27,0	1/1:26,0:23:57.03:1257,57,0	1/1:25,0:24:50.48:850,50,0	1/1:10,0:10:17.87:290,18,0	0/0:24,0:28:70.04:0,70,1070	0/0:18,0:25:2.76:0,3,816	0/0:16,0:19:47.50:0,47,1057	1/1:25,0:25:65.85:1490,66,0	1/1:23,0:22:44.80:957,45,0	1/1:24,0:23:68.91:1959,69,0	1/1:13,0:13:11.93:463,12,0
chr10	66665333	.	A	AAAAAAAAAAC	13257.02	PASS	AB=0.979;AC=28;AF=0.500;AN=56;BaseQRankSum=8.356;DP=619;FS=24.649;HRun=0;HaplotypeScore=217.4247;InbreedingCoeff=-0.0781;MQ=65.24;MQ0=2;MQRankSum=-10.224;QD=28.27;ReadPosRankSum=1.745;VQSLOD=2.9732;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:29:6.36:6,0,167	0/1:18,0:18:7.56:8,0,265	0/0:36,0:18:34.38:0,34,258	0/0:20,0:12:18.73:0,19,155	0/1:24,0:23:69.55:577,0,70	1/1:3,0:28:15.70:503,16,0	1/1:2,0:12:6.02:248,6,0	0/1:23,0:23:3.25:3,0,310	0/1:19,0:18:22.90:555,0,23	1/1:17,0:16:39.07:1065,39,0	1/1:3,1:24:14.46:318,14,0	0/1:18,0:19:22.30:1106,0,22	0/0:16,0:16:33.08:0,33,457	0/1:19,0:17:51.89:404,0,52	0/1:28,0:28:99:714,0,126	0/1:28,0:25:20.67:1212,0,21	1/1:13,0:13:9.56:425,10,0	0/1:13,0:13:52.45:157,0,52	0/1:29,0:26:4.33:1307,0,4	0/1:18,0:29:47.66:464,0,48	0/1:8,0:8:21.22:300,0,21	0/0:33,0:33:78.58:0,79,1069	0/0:26,0:26:57.73:0,58,975	0/0:19,0:19:54.10:0,54,1013	0/1:24,0:24:23.82:1138,0,24	0/1:21,0:20:6.11:859,0,6	0/1:24,0:23:6.22:1437,0,6	1/1:6,0:17:11.66:452,12,0
chr10	66665334	.	A	AC	1460.59	PASS	AB=0.968;AC=18;AF=0.321;AN=56;BaseQRankSum=0.263;DP=607;FS=32.750;HRun=0;HaplotypeScore=92.0754;InbreedingCoeff=-0.3058;MQ=65.57;MQ0=2;MQRankSum=-1.285;QD=4.19;ReadPosRankSum=1.918;VQSLOD=1.2235;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:35.49:0,35,253	0/0:18,0:18:36.71:0,37,209	0/0:36,0:18:35.62:0,36,275	0/0:20,0:12:5.92:0,6,106	0/0:22,0:21:52.94:0,53,357	0/1:22,0:22:25.55:45,0,26	0/1:10,0:9:2.30:2,0,15	0/0:24,0:24:49.51:0,50,370	0/1:19,0:18:63.28:63,0,88	0/0:18,0:16:2.10:0,2,57	0/1:23,0:23:6.58:31,0,7	0/1:15,0:20:54.44:54,0,86	0/0:16,0:16:47.28:0,47,397	0/1:18,0:16:58.65:59,0,100	0/1:28,0:28:74.97:229,0,75	0/1:25,2:24:44.25:192,0,44	0/1:12,0:12:9.60:50,0,10	0/1:13,0:13:7.08:133,0,7	0/1:20,9:26:99:121,0,149	1/1:30,0:29:0.93:219,1,0	0/1:8,0:8:14.18:53,0,14	0/0:32,0:32:93.77:0,94,858	0/0:25,0:25:73.78:0,74,677	0/0:19,0:19:57.08:0,57,598	0/1:26,0:26:71.45:122,0,71	0/1:23,0:22:99:107,0,115	0/1:24,0:23:99:129,0,136	0/1:17,0:17:7.18:7,0,86
chr10	66665727	.	AGCAATC	A	2783.94	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=10.061;DP=934;FS=9.607;HRun=0;HaplotypeScore=184.6759;InbreedingCoeff=1.0000;MQ=85.30;MQ0=0;MQRankSum=-10.653;QD=49.71;ReadPosRankSum=-0.299;VQSLOD=2.6535;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,36:42:84.25:1946,84,0	1/1:1,13:14:39.13:959,39,0	0/0:35,0:34:99:0,102,3383	0/0:30,0:30:83.77:0,84,2492	0/0:36,0:36:99:0,99,3405	0/0:26,0:26:78.27:0,78,2823	0/0:30,0:30:84.21:0,84,2900	0/0:42,0:42:99:0,120,4096	0/0:47,0:47:99:0,138,4709	0/0:46,0:46:99:0,132,4729	0/0:19,0:19:51.16:0,51,1764	0/0:32,0:32:96.33:0,96,3293	0/0:38,0:38:99:0,111,3775	0/0:26,0:26:78.27:0,78,2798	0/0:45,0:45:99:0,132,4511	0/0:35,0:35:99:0,105,3619	0/0:35,0:35:99:0,105,3519	0/0:28,0:28:81.28:0,81,2824	0/0:24,0:24:72.25:0,72,2490	0/0:33,0:33:96.26:0,96,3318	0/0:35,0:35:99:0,102,3638	0/0:30,0:30:90.28:0,90,3057	0/0:26,0:26:78.27:0,78,2676	0/0:30,0:30:90.31:0,90,3123	0/0:27,0:27:81.28:0,81,2954	0/0:54,0:54:99:0,160,5574	0/0:41,0:41:99:0,123,4030	0/0:28,0:28:78.10:0,78,2632
chr10	66668266	.	G	GA	3227.04	PASS	AB=0.697;AC=31;AF=0.554;AN=56;BaseQRankSum=0.085;DP=640;FS=15.861;HRun=14;HaplotypeScore=89.0771;InbreedingCoeff=0.1557;MQ=53.37;MQ0=12;MQRankSum=1.573;QD=6.68;ReadPosRankSum=-2.901;VQSLOD=0.3066;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:40:84.47:0,84,488	0/1:8,0:8:5.12:5,0,62	1/1:6,0:1:2.04:6,2,0	0/0:4,0:2:1.23:0,1,3	1/1:16,4:42:51.78:294,52,0	1/1:7,13:20:26.99:236,27,0	0/1:7,10:18:7.68:41,0,8	0/0:23,0:20:15.56:0,16,176	1/1:6,11:17:21:185,21,0	1/1:14,7:22:5.35:176,5,0	0/1:11,13:26:47.08:131,0,47	0/1:5,11:17:1.43:102,0,1	0/0:19,0:19:4.37:0,4,125	0/1:17,17:33:1.39:97,0,1	1/1:9,13:21:4.73:165,5,0	0/1:11,11:25:22.30:118,0,22	0/1:8,23:29:15.89:339,0,16	0/1:19,5:28:37.14:185,0,37	1/1:10,2:11:1.63:110,2,0	0/1:17,16:34:16.86:217,0,17	0/1:5,6:11:13.26:20,0,13	0/0:15,0:15:23.36:0,23,152	0/0:25,0:27:14.52:0,15,161	0/0:23,1:26:55.14:0,55,351	1/1:6,15:24:8:87,8,0	1/1:18,22:42:65.41:518,65,0	1/1:23,5:31:44.21:348,44,0	0/1:8,3:9:13.27:21,0,13
chr10	66668886	.	TAC	T	137.04	PASS	AB=0.990;AC=15;AF=0.326;AN=46;BaseQRankSum=3.890;DP=577;FS=0.000;HRun=0;HaplotypeScore=132.6126;InbreedingCoeff=0.0936;MQ=66.60;MQ0=15;MQRankSum=-1.130;QD=0.64;ReadPosRankSum=-2.098;VQSLOD=2.1354;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:38,2:39:4.06:103,4,0	1/1:7,0:7:7.16:43,7,0	./.	./.	0/0:22,0:22:8.96:0,9,68	./.	1/1:20,0:16:2.68:11,3,0	./.	0/0:22,0:22:0.24:0,0,16	0/1:25,0:25:1.41:1,0,61	0/0:12,0:12:2.97:0,3,20	0/0:27,0:27:2.83:0,3,19	0/1:20,0:20:13.01:13,0,125	0/1:13,0:13:6.05:15,0,6	0/0:23,0:22:9:0,9,51	0/0:18,0:18:7.28:0,7,46	0/0:17,0:15:9.54:0,10,50	0/0:14,0:13:2.98:0,3,22	0/1:12,0:12:6.32:6,0,16	0/0:21,0:21:11.88:0,12,91	0/0:19,0:16:2.04:0,2,6	0/0:21,0:21:3:0,3,195	0/0:16,0:16:7.16:0,7,130	0/1:24,2:26:15.10:15,0,233	./.	0/1:22,0:21:9.88:10,0,86	0/1:21,0:19:3.27:34,0,3	1/1:9,0:8:2.77:14,3,0
chr10	66668923	.	ACACACACACACT	A	5981.10	PASS	AB=0.978;AC=35;AF=0.625;AN=56;BaseQRankSum=0.913;DP=610;FS=4.813;HRun=0;HaplotypeScore=172.4596;InbreedingCoeff=0.5701;MQ=37.43;MQ0=71;MQRankSum=-4.115;QD=14.21;ReadPosRankSum=-2.431;VQSLOD=3.2135;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:30:30.55:0,31,544	0/0:10,0:8:11.53:0,12,156	0/0:2,0:1:3.01:0,3,44	0/0:6,0:2:5.99:0,6,81	0/0:18,0:17:7.38:0,7,96	1/1:9,2:8:3.48:36,3,0	1/1:26,0:19:17.87:275,18,0	0/1:22,0:11:19.60:20,0,75	1/1:20,3:20:16.01:455,16,0	0/1:25,2:24:20.54:819,0,21	1/1:8,2:9:5.95:79,6,0	1/1:21,5:26:17.58:235,18,0	0/0:23,0:23:45.51:0,46,990	1/1:20,4:22:14.81:399,15,0	1/1:19,8:27:21.04:423,21,0	1/1:20,5:20:26.32:458,26,0	0/1:19,0:15:75.46:284,0,75	1/1:15,0:8:3.64:79,4,0	1/1:12,1:12:9.11:306,9,0	1/1:20,1:20:3.99:323,4,0	1/1:55,0:38:13.65:184,14,0	0/0:27,0:26:47.85:0,48,1191	0/0:20,0:17:36.03:0,36,966	0/0:42,0:39:54.39:0,54,1368	1/1:13,4:15:3:25,3,0	1/1:26,4:26:67.34:888,67,0	1/1:7,13:16:21.48:579,21,0	1/1:1,6:6:2.85:114,3,0
chr10	66668933	.	ACTCTCT	A	2553.43	PASS	AB=0.987;AC=32;AF=0.615;AN=52;BaseQRankSum=4.408;DP=598;FS=76.964;HRun=0;HaplotypeScore=157.5895;InbreedingCoeff=-0.2216;MQ=35.56;MQ0=76;MQRankSum=0.006;QD=5.11;ReadPosRankSum=-1.874;VQSLOD=-0.5048;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:39,0:29:99:113,0,123	0/1:10,1:9:14.29:67,0,14	./.	./.	1/1:17,1:18:6.02:90,6,0	1/1:13,0:10:0.36:0,0,0	0/1:22,0:15:11.44:67,0,11	1/1:21,0:7:19.25:223,19,0	1/1:23,1:20:4.41:253,4,0	0/1:27,0:22:99:198,0,252	0/1:11,0:10:10.70:19,0,11	0/1:23,1:24:38.55:39,0,56	0/0:22,0:22:25.58:0,26,862	1/1:21,0:19:8.33:128,8,0	1/1:25,0:23:5.35:132,5,0	1/1:24,0:19:12.85:185,13,0	0/1:17,0:13:72.25:150,0,72	0/1:12,0:5:27.12:33,0,27	0/1:14,0:12:67.34:67,0,105	0/1:19,0:18:67.14:206,0,67	1/1:54,0:35:2.89:41,3,0	0/1:24,0:23:8.32:8,0,821	0/1:20,0:17:40.61:41,0,831	0/0:46,0:42:37.92:0,38,1446	0/0:20,0:18:3:0,3,26	0/1:30,0:27:99:468,0,144	0/1:22,0:18:0.87:161,0,1	1/1:6,0:6:2.80:18,3,0
chr10	66668935	.	TCTCTCA	T	1415.48	PASS	AB=0.996;AC=29;AF=0.558;AN=52;BaseQRankSum=5.322;DP=599;FS=73.777;HRun=0;HaplotypeScore=162.7502;InbreedingCoeff=-0.1766;MQ=35.31;MQ0=79;MQRankSum=0.558;QD=3.06;ReadPosRankSum=-2.418;VQSLOD=-0.4251;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:39,0:29:88.49:88,0,169	0/1:11,0:9:33.13:81,0,33	./.	./.	1/1:17,0:17:5.97:46,6,0	1/1:15,0:12:0.36:0,0,0	0/1:22,0:15:31.06:40,0,31	1/1:14,7:7:19.25:275,19,0	1/1:22,0:18:3.04:160,3,0	0/1:26,0:21:56.92:57,0,429	0/0:11,0:10:2.97:0,3,38	0/1:25,0:25:12.61:13,0,107	0/0:23,0:23:13.25:0,13,916	1/1:21,0:19:8.24:72,8,0	1/1:25,0:23:7.10:69,7,0	0/1:24,0:19:4.42:77,0,4	0/1:17,1:14:99:106,0,129	0/1:11,0:4:23.80:24,0,46	0/1:16,0:14:31.97:32,0,196	0/1:18,0:17:86.76:87,0,108	1/1:51,1:32:2.75:20,3,0	0/0:25,0:24:4.70:0,5,981	0/1:20,0:17:5.12:5,0,902	0/0:46,0:42:23.88:0,24,1556	0/0:19,0:17:3.01:0,3,47	0/1:32,0:27:99:228,0,282	0/1:22,0:18:32.69:79,0,33	1/1:6,0:6:2.35:8,2,0
chr10	66668969	.	TCACTCACACA	T	2000.42	PASS	AB=0.850;AC=26;AF=0.542;AN=48;BaseQRankSum=4.460;DP=544;FS=0.000;HRun=0;HaplotypeScore=131.7141;InbreedingCoeff=0.3738;MQ=32.51;MQ0=66;MQRankSum=-6.513;QD=6.74;ReadPosRankSum=0.850;VQSLOD=2.4472;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:21:5.13:0,5,69	0/0:4,0:3:3.01:0,3,86	./.	./.	0/0:14,6:16:0.47:0,0,1	0/1:5,7:10:0.01:0,0,0	./.	0/0:25,0:13:33.52:0,34,470	1/1:18,4:15:3.07:93,3,0	1/1:11,4:14:23.98:486,24,0	1/1:6,2:8:3.01:50,3,0	1/1:15,7:22:13.69:245,14,0	0/0:25,0:22:35.17:0,35,821	1/1:13,2:14:2.63:92,3,0	./.	1/1:19,2:14:2.74:21,3,0	0/1:12,5:13:23.31:151,0,23	0/1:13,0:7:4.73:94,0,5	1/1:11,2:10:1.09:286,1,0	1/1:14,3:14:1.69:11,2,0	0/1:61,2:42:0.82:1,0,69	0/0:21,0:20:33.11:0,33,881	0/0:16,0:14:21.06:0,21,463	0/0:53,0:46:66.70:0,67,1600	1/1:12,6:17:3.01:50,3,0	0/1:13,2:16:99:324,0,177	1/1:15,3:17:11.98:243,12,0	0/1:4,1:5:0:0,0,0
chr10	66668973	.	T	TCACA	1459.05	PASS	AB=0.979;AC=25;AF=0.543;AN=46;BaseQRankSum=5.926;DP=549;FS=0.000;HRun=0;HaplotypeScore=110.2657;InbreedingCoeff=0.4564;MQ=32.32;MQ0=72;MQRankSum=-6.196;QD=5.91;ReadPosRankSum=0.615;VQSLOD=1.7829;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:25:6.47:0,6,71	0/0:4,0:3:3.01:0,3,51	./.	./.	0/1:20,1:16:0:0,0,0	0/1:15,0:13:0.10:1,0,0	./.	0/0:28,0:16:36.45:0,36,354	1/1:20,1:14:2.93:56,3,0	1/1:13,1:14:14.75:336,15,0	1/1:8,0:8:3.01:50,3,0	1/1:20,1:21:14.60:215,15,0	0/0:23,0:20:36.55:0,37,522	1/1:13,2:12:2.95:59,3,0	./.	1/1:19,2:15:4.22:24,4,0	0/1:18,0:14:21.96:80,0,22	1/1:10,4:8:8.84:107,9,0	0/1:12,0:8:1.49:167,0,1	1/1:14,2:13:2.59:13,3,0	0/0:61,4:45:5.03:0,5,37	0/0:21,0:20:36.06:0,36,574	0/0:17,0:15:24.03:0,24,324	0/0:54,0:46:69.19:0,69,944	1/1:14,2:15:2.72:49,3,0	0/1:15,1:15:83.47:261,0,83	1/1:17,1:17:12:195,12,0	./.
chr10	66668999	.	A	ACT	190.23	PASS	AB=0.982;AC=15;AF=0.300;AN=50;BaseQRankSum=5.481;DP=641;FS=1.948;HRun=0;HaplotypeScore=128.6585;InbreedingCoeff=-0.0116;MQ=34.66;MQ0=92;MQRankSum=-4.508;QD=0.73;ReadPosRankSum=-1.221;VQSLOD=2.3395;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:31:11.89:0,12,156	0/0:7,0:6:9:0,9,114	./.	./.	0/1:18,0:12:0.01:1,0,0	1/1:18,0:18:0.27:1,0,0	0/0:40,0:25:3.31:0,3,15	0/0:48,0:36:99:0,99,1448	1/1:23,0:16:0.15:2,0,0	0/1:21,0:19:37.10:37,0,227	./.	0/1:15,0:15:3.57:54,0,4	0/0:17,0:15:36.11:0,36,521	0/1:14,0:12:2.28:2,0,14	0/1:22,2:20:16.53:35,0,17	0/1:20,2:17:29.43:30,0,29	0/0:24,0:21:14.64:0,15,101	0/0:23,0:16:2.41:0,2,142	0/1:22,0:14:12.39:12,0,200	0/1:18,0:15:6.13:6,0,15	0/0:71,0:41:6.07:0,6,54	0/0:24,0:22:43.40:0,43,655	0/0:20,0:16:30.09:0,30,434	0/0:54,0:46:78.66:0,79,1103	0/1:23,0:21:0:0,0,0	0/1:28,1:26:88.53:89,0,238	0/1:15,0:12:3.60:42,0,4	0/0:6,0:5:2.49:0,2,37
chr10	66669009	.	ACT	A	269.47	PASS	AB=0.998;AC=23;AF=0.460;AN=50;BaseQRankSum=7.598;DP=638;FS=9.340;HRun=0;HaplotypeScore=123.5647;InbreedingCoeff=0.2335;MQ=35.78;MQ0=90;MQRankSum=-1.791;QD=0.72;ReadPosRankSum=-1.314;VQSLOD=1.7669;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:35:23.84:0,24,317	0/0:7,0:6:8.86:0,9,140	./.	./.	1/1:22,0:15:2.45:12,2,0	1/1:16,2:17:5.20:24,5,0	1/1:33,0:19:5.52:26,6,0	0/0:48,0:36:99:0,107,1546	1/1:23,0:16:3.13:9,3,0	0/0:24,0:20:12.08:0,12,350	./.	1/1:14,0:14:2.89:20,3,0	0/0:15,0:14:38.92:0,39,557	0/1:15,0:13:15.78:16,0,23	1/1:24,1:21:7.61:56,8,0	0/1:22,0:17:6.35:6,0,8	0/1:29,0:26:11.53:12,0,64	0/1:21,0:16:22.90:58,0,23	0/0:24,0:12:20.77:0,21,204	1/1:15,0:12:1.98:11,2,0	0/1:72,1:41:27.92:28,0,45	0/0:23,0:21:34.97:0,35,697	0/0:19,0:16:27.04:0,27,430	0/0:52,0:44:80.78:0,81,1181	1/1:22,0:20:1.15:19,1,0	0/1:30,0:26:96.04:96,0,123	0/1:12,0:9:7.35:34,0,7	0/0:4,0:3:4.10:0,4,54
chr10	66669011	.	TCA	T	744.75	PASS	AB=0.932;AC=21;AF=0.420;AN=50;BaseQRankSum=6.844;DP=655;FS=1.546;HRun=0;HaplotypeScore=126.4164;InbreedingCoeff=0.0759;MQ=36.53;MQ0=92;MQRankSum=-0.667;QD=1.86;ReadPosRankSum=-1.792;VQSLOD=2.1223;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:37:29.91:0,30,451	0/0:7,0:6:9.03:0,9,146	./.	./.	0/1:22,1:16:0.06:27,0,0	1/1:18,0:17:6.31:75,6,0	1/1:32,0:18:6.01:65,6,0	0/0:52,0:37:87.23:0,87,1137	0/1:23,0:16:8.66:15,0,9	0/0:25,0:21:19.67:0,20,339	./.	0/1:11,3:14:5.80:75,0,6	0/0:16,0:15:32.57:0,33,501	0/1:14,2:14:17.59:18,0,33	0/1:21,5:22:6.71:137,0,7	1/1:22,0:17:3.72:22,4,0	0/1:28,1:26:28.90:29,0,71	0/1:20,0:16:6.13:36,0,6	0/1:24,0:12:3.65:4,0,71	1/1:15,0:12:3.34:38,3,0	0/1:73,1:42:29.64:68,0,30	0/0:24,0:22:41.85:0,42,584	0/0:20,0:17:25.88:0,26,369	0/0:54,1:47:71.70:0,72,1055	1/1:20,2:20:2.08:67,2,0	0/1:29,2:27:35.56:167,0,36	0/1:9,2:9:24.52:58,0,25	0/0:3,1:3:4.41:0,4,40
chr10	66669025	.	ACT	A	439.37	PASS	AB=0.993;AC=25;AF=0.481;AN=52;BaseQRankSum=6.444;DP=734;FS=13.448;HRun=0;HaplotypeScore=145.8186;InbreedingCoeff=0.0475;MQ=40.82;MQ0=89;MQRankSum=0.734;QD=0.95;ReadPosRankSum=0.543;VQSLOD=2.1767;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:32:9.02:0,9,515	0/1:8,0:8:4.12:4,0,145	./.	0/1:27,0:7:8.37:46,0,8	1/1:26,0:20:2.51:44,3,0	1/1:22,1:22:2.95:55,3,0	1/1:28,0:16:8.49:46,8,0	0/0:53,0:36:99:0,106,987	0/0:28,0:23:3.57:0,4,41	0/1:23,1:19:20.11:20,0,185	./.	1/1:18,0:18:0.48:19,0,0	0/0:17,0:16:23.96:0,24,600	0/1:18,0:16:9.59:10,0,18	1/1:29,2:27:8.49:92,8,0	1/1:29,0:24:3.10:12,3,0	0/1:36,0:33:0.29:0,0,61	0/0:23,0:19:5.99:0,6,77	0/1:26,0:14:11.15:11,0,64	0/1:17,0:15:6.59:7,0,21	0/1:76,3:51:29.57:30,0,39	0/0:19,0:18:38.71:0,39,634	0/0:19,0:18:13.06:0,13,427	0/0:51,0:44:72.19:0,72,1144	1/1:24,0:22:7.26:71,7,0	0/1:31,0:27:69.29:97,0,69	0/1:12,0:10:9.15:9,0,66	0/1:6,0:5:22.42:22,0,28
chr10	66669031	.	ACACACACACACT	A	5450.41	PASS	AB=0.829;AC=34;AF=0.630;AN=54;BaseQRankSum=3.874;DP=781;FS=1.596;HRun=0;HaplotypeScore=183.7147;InbreedingCoeff=0.6906;MQ=42.40;MQ0=90;MQRankSum=-1.509;QD=10.92;ReadPosRankSum=-0.943;VQSLOD=3.9404;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:32:11.47:0,11,1028	0/0:8,0:8:11.90:0,12,250	0/0:32,0:4:9.03:0,9,137	0/0:35,0:9:20.17:0,20,203	1/1:26,0:20:11.21:301,11,0	1/1:21,0:20:3.18:280,3,0	1/1:28,1:17:15.05:312,15,0	0/0:49,0:33:38.81:0,39,626	1/1:13,18:26:7.14:166,7,0	0/1:22,0:17:36.52:142,0,37	./.	1/1:20,0:20:5.06:132,5,0	0/0:16,0:15:37.84:0,38,973	1/1:9,12:19:5.55:117,6,0	1/1:32,2:30:10.84:777,11,0	1/1:10,20:26:5.21:124,5,0	1/1:15,23:35:15.15:158,15,0	0/1:11,12:19:25.72:107,0,26	1/1:18,10:16:16.70:366,17,0	1/1:8,11:17:5.03:31,5,0	1/1:78,0:51:33.78:653,34,0	0/0:21,0:20:36.12:0,36,982	0/0:20,0:19:30.10:0,30,903	0/0:51,0:45:54.68:0,55,2000	1/1:23,3:24:12.74:381,13,0	1/1:11,23:30:47.39:857,47,0	1/1:12,0:10:14.45:353,14,0	1/1:6,0:5:14.75:192,15,0
chr10	66669039	.	A	ACT	1407.21	PASS	AB=0.979;AC=23;AF=0.426;AN=54;BaseQRankSum=7.824;DP=757;FS=8.049;HRun=0;HaplotypeScore=141.8861;InbreedingCoeff=0.2039;MQ=44.58;MQ0=85;MQRankSum=-0.764;QD=3.34;ReadPosRankSum=0.565;VQSLOD=2.3542;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:35:47.33:0,47,624	0/0:8,0:8:13.84:0,14,167	0/0:54,0:12:23.57:0,24,209	0/0:45,0:14:6.65:0,7,211	1/1:20,0:15:2.17:73,2,0	0/1:21,0:21:4.91:83,0,5	1/1:24,0:14:3.28:104,3,0	0/0:38,0:23:62.84:0,63,778	0/1:28,0:23:16.30:32,0,16	0/0:20,0:15:4.72:0,5,201	./.	0/1:19,0:19:2.39:32,0,2	0/0:15,0:14:42.09:0,42,590	1/1:18,1:18:5.97:74,6,0	1/1:32,0:29:23.57:252,24,0	1/1:27,0:24:6.36:58,6,0	0/1:36,1:34:24.65:25,0,38	0/1:20,1:18:21.69:22,0,42	0/1:22,1:16:80.57:81,0,124	0/0:18,0:16:5.60:0,6,38	1/1:77,0:54:23.10:197,23,0	0/0:19,0:18:42.05:0,42,549	0/0:18,0:17:33.08:0,33,460	0/0:50,1:45:91.90:0,92,1127	1/1:25,0:23:1.69:164,2,0	0/1:31,0:28:34.30:213,0,34	0/1:11,1:11:14.26:156,0,14	0/1:5,0:5:17.17:17,0,34
chr10	66669041	.	ACT	A	1256.77	PASS	AB=0.990;AC=22;AF=0.407;AN=54;BaseQRankSum=4.265;DP=755;FS=9.041;HRun=0;HaplotypeScore=139.0138;InbreedingCoeff=-0.0376;MQ=45.00;MQ0=83;MQRankSum=-3.564;QD=2.51;ReadPosRankSum=-5.945;VQSLOD=-0.5636;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:39,0:35:4.95:5,0,603	0/1:8,0:8:9.07:9,0,180	0/1:56,0:13:35.97:36,0,137	0/0:49,0:16:5.94:0,6,130	0/1:20,0:15:7.53:56,0,8	0/1:19,1:20:3.61:90,0,4	0/1:23,0:14:5.79:67,0,6	0/0:34,0:21:38.94:0,39,645	0/1:28,0:23:20.71:22,0,21	0/1:22,0:17:3.71:200,0,4	./.	0/0:20,0:20:6.09:0,6,34	0/0:16,0:15:20.71:0,21,591	0/1:18,0:18:4.51:5,0,7	0/1:29,2:29:37.24:41,0,37	1/1:27,0:24:5.54:29,6,0	0/1:37,0:34:3.79:61,0,4	0/0:20,0:17:5.66:0,6,67	0/1:22,0:16:32.06:142,0,32	0/0:17,0:15:5.96:0,6,52	0/1:75,2:55:22.56:148,0,23	0/0:18,0:18:35.49:0,35,499	0/0:18,0:17:32.91:0,33,498	0/0:52,0:46:27.75:0,28,1179	1/1:26,0:24:0.07:141,0,0	1/1:30,0:27:13.03:224,13,0	0/1:11,0:10:43.83:70,0,44	1/1:5,0:5:11.64:71,12,0
chr10	66669043	.	T	TCACA	5072.80	PASS	AB=1.000;AC=37;AF=0.685;AN=54;BaseQRankSum=4.714;DP=757;FS=0.000;HRun=0;HaplotypeScore=142.6553;InbreedingCoeff=0.7837;MQ=45.30;MQ0=81;MQRankSum=-1.256;QD=9.95;ReadPosRankSum=-0.856;VQSLOD=3.9123;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:36:13.25:0,13,593	0/0:8,0:8:12.36:0,12,147	0/1:60,0:13:7.03:7,0,269	0/0:52,0:18:22.85:0,23,293	1/1:16,3:15:16.84:295,17,0	1/1:18,2:20:20.37:298,20,0	1/1:25,0:16:14.79:240,15,0	0/0:33,0:20:30.10:0,30,489	1/1:25,1:22:7.27:144,7,0	1/1:22,0:18:14.51:138,15,0	./.	1/1:6,16:22:4.92:85,5,0	0/0:16,0:15:27.52:0,28,415	1/1:15,2:17:6.02:107,6,0	1/1:23,7:28:31.99:655,32,0	1/1:23,2:22:5.87:121,6,0	1/1:35,1:33:11.25:102,11,0	1/1:20,0:17:0.99:65,1,0	1/1:21,0:15:25.92:360,26,0	1/1:16,0:15:5.49:25,5,0	1/1:76,1:55:50.68:768,51,0	0/0:16,0:16:21.07:0,21,335	0/0:18,0:18:30.09:0,30,458	0/0:52,0:47:67.09:0,67,1058	1/1:20,5:23:25.60:408,26,0	1/1:29,0:27:44.10:693,44,0	1/1:10,2:11:21.50:385,21,0	1/1:4,1:5:13.04:176,13,0
chr10	66669624	.	T	TTG	1882.75	PASS	AB=0.916;AC=39;AF=0.696;AN=56;BaseQRankSum=-1.502;DP=432;FS=35.553;HRun=0;HaplotypeScore=69.9209;InbreedingCoeff=0.3044;MQ=65.69;MQ0=36;MQRankSum=-0.304;QD=7.72;ReadPosRankSum=1.298;VQSLOD=1.6040;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:12,0:14:10.04:102,10,0	0/0:2,0:2:0.87:0,1,13	0/0:86,0:15:18.83:0,19,159	0/0:74,0:21:10.34:0,10,114	0/1:9,0:9:7.96:44,0,8	1/1:9,0:8:21.20:145,21,0	1/1:10,0:10:21.19:152,21,0	1/1:5,0:12:9.42:99,9,0	1/1:11,0:12:14.10:125,14,0	1/1:12,0:13:16.11:151,16,0	1/1:8,0:9:7.78:49,8,0	0/1:6,0:7:14.73:66,0,15	0/0:10,0:10:10.93:0,11,64	1/1:13,0:12:14.40:119,14,0	1/1:12,0:11:16.40:167,16,0	1/1:13,0:13:25.54:162,26,0	0/1:12,5:20:6.33:12,0,6	0/1:9,0:9:7.66:73,0,8	1/1:7,0:7:0.49:43,0,0	1/1:4,1:6:12.61:72,13,0	1/1:8,0:8:8.50:76,8,0	0/1:9,0:9:13.30:13,0,16	0/0:16,0:16:11.18:0,11,155	0/1:10,0:11:22.14:22,0,31	1/1:7,0:7:11.78:87,12,0	0/1:12,0:12:13.53:60,0,14	1/1:11,0:12:16.77:123,17,0	1/1:7,0:8:17.51:95,18,0
chr10	66669833	.	G	GA	6154.42	PASS	AB=0.645;AC=34;AF=0.607;AN=56;BaseQRankSum=3.749;DP=428;FS=7.493;HRun=10;HaplotypeScore=54.6445;InbreedingCoeff=0.5587;MQ=61.75;MQ0=11;MQRankSum=0.641;QD=20.58;ReadPosRankSum=0.656;VQSLOD=5.6828;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:25:63.99:0,64,504	0/0:2,0:2:5.99:0,6,49	0/0:12,0:4:9.61:0,10,41	0/1:11,0:9:27.12:27,0,101	1/1:3,22:25:51.08:527,51,0	0/1:3,17:20:4.17:371,0,4	1/1:5,12:16:6.81:266,7,0	0/0:28,0:27:59.90:0,60,490	1/1:1,10:11:27.07:288,27,0	1/1:2,14:16:42.08:438,42,0	0/1:3,9:12:0.58:200,0,1	1/1:3,6:9:15.04:160,15,0	0/0:16,0:16:41.95:0,42,345	1/1:2,7:9:21.05:223,21,0	0/1:4,6:9:13.79:186,0,14	1/1:3,19:22:19.04:394,19,0	1/1:4,25:29:63.16:672,63,0	1/1:0,9:9:27.06:283,27,0	1/1:7,20:25:38.50:607,39,0	1/1:3,8:11:21.05:223,21,0	1/1:0,11:11:33.08:352,33,0	0/0:10,0:10:23.95:0,24,196	0/0:18,0:18:35.90:0,36,292	0/0:18,0:17:44.93:0,45,366	0/1:4,11:15:18.74:226,0,19	1/1:1,11:12:33.07:343,33,0	1/1:6,12:16:8.41:285,8,0	0/1:1,4:5:12.61:83,0,13
chr10	66671335	.	A	AGT	787.53	PASS	AB=1.000;AC=11;AF=0.204;AN=54;BaseQRankSum=-4.534;DP=458;FS=2.512;HRun=0;HaplotypeScore=117.9764;InbreedingCoeff=0.0808;MQ=64.94;MQ0=6;MQRankSum=2.828;QD=4.55;ReadPosRankSum=-1.229;VQSLOD=2.8268;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:27:33.16:39,0,33	0/1:5,0:5:9.43:10,0,9	0/0:35,0:27:4.33:0,4,89	0/0:20,0:13:5.09:0,5,67	0/0:20,0:20:11.36:0,11,56	0/0:21,0:21:13.11:0,13,56	0/0:8,0:8:2.84:0,3,14	1/1:29,16:45:50.87:648,51,0	0/0:11,0:10:3.79:0,4,18	0/1:18,0:18:20.90:60,0,21	0/0:10,0:10:1.55:0,2,4	0/0:9,0:9:8.82:0,9,60	0/0:12,0:12:9.01:0,9,94	0/0:10,0:10:5.68:0,6,28	1/1:11,0:11:3:27,3,0	0/0:13,0:13:2.58:0,3,44	0/1:12,0:11:14.13:40,0,14	0/0:20,0:20:9.90:0,10,40	0/1:19,0:18:12.48:12,0,42	0/0:12,0:12:7.90:0,8,35	./.	0/0:6,0:6:12.02:0,12,128	0/0:14,0:14:18.04:0,18,198	0/0:7,0:7:9.01:0,9,93	0/0:23,0:23:17.04:0,17,84	0/1:15,0:15:3.29:47,0,3	0/0:28,0:27:7.43:0,7,94	0/1:21,0:21:34.51:46,0,35
chr10	66671354	.	GTGTGTGTA	G	6324.31	PASS	AB=0.938;AC=36;AF=0.643;AN=56;BaseQRankSum=6.037;DP=378;FS=7.472;HRun=0;HaplotypeScore=124.2617;InbreedingCoeff=0.6795;MQ=49.71;MQ0=6;MQRankSum=-5.903;QD=25.60;ReadPosRankSum=3.958;VQSLOD=4.0273;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:34.67:0,35,718	0/0:5,0:5:6.02:0,6,200	0/0:21,0:15:39.07:0,39,907	0/0:13,0:6:1.57:0,2,336	1/1:2,13:15:15.05:423,15,0	0/1:20,0:20:8.23:149,0,8	1/1:6,0:6:2.97:20,3,0	0/0:42,0:42:99:0,113,2179	0/1:6,1:6:9.18:16,0,9	1/1:9,11:20:51.09:1133,51,0	1/1:3,6:9:6.01:88,6,0	1/1:6,0:6:9.71:59,10,0	0/0:8,0:8:21.05:0,21,572	1/1:9,1:10:5.17:99,5,0	1/1:2,5:7:3.01:87,3,0	1/1:6,7:13:18.05:437,18,0	1/1:10,4:13:15.05:355,15,0	1/1:11,6:18:24.99:481,25,0	1/1:11,1:10:24.01:352,24,0	1/1:5,5:10:9.03:246,9,0	1/1:2,2:4:2.99:24,3,0	0/0:5,0:5:15.05:0,15,504	0/0:9,0:9:21.05:0,21,749	0/0:4,0:4:12.04:0,12,386	1/1:23,0:23:23.89:185,24,0	1/1:4,8:12:21.04:415,21,0	1/1:10,13:22:45.04:949,45,0	1/1:9,9:18:33.07:808,33,0
chr10	66671356	.	GTGTGTA	G	4661.63	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=9.132;DP=343;FS=9.042;HRun=0;HaplotypeScore=113.9509;InbreedingCoeff=0.8061;MQ=50.16;MQ0=5;MQRankSum=-7.095;QD=20.81;ReadPosRankSum=4.669;VQSLOD=3.8640;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:34.63:0,35,592	0/0:5,0:5:6.02:0,6,153	0/0:16,0:12:30.03:0,30,621	0/0:12,0:5:9.54:0,10,228	1/1:14,0:14:15.05:246,15,0	1/1:5,14:19:10.93:380,11,0	1/1:0,6:6:3.01:67,3,0	0/0:41,0:41:99:0,114,2034	1/1:6,1:6:5.97:64,6,0	1/1:18,0:18:48.41:658,48,0	1/1:7,0:7:3.01:38,3,0	1/1:5,1:6:12.03:225,12,0	0/0:6,0:6:18.03:0,18,417	1/1:3,6:9:8.21:138,8,0	1/1:7,0:7:3.01:51,3,0	1/1:10,0:11:15.05:242,15,0	1/1:13,0:13:14.98:195,15,0	1/1:17,0:17:25.83:303,26,0	1/1:10,0:8:20.68:201,21,0	1/1:7,0:7:9.03:145,9,0	1/1:3,0:3:2.99:24,3,0	0/0:5,0:5:15.03:0,15,389	0/0:8,0:8:17.81:0,18,568	0/0:4,0:4:12.02:0,12,295	1/1:2,21:23:24.05:470,24,0	1/1:8,0:8:15.04:204,15,0	1/1:21,0:21:44.98:567,45,0	1/1:18,0:18:27.56:442,28,0
chr10	66671358	.	GTGTA	G	2865.98	PASS	AB=1.000;AC=39;AF=0.696;AN=56;BaseQRankSum=9.716;DP=322;FS=10.905;HRun=0;HaplotypeScore=106.2036;InbreedingCoeff=0.7181;MQ=49.44;MQ0=7;MQRankSum=-6.652;QD=13.03;ReadPosRankSum=5.313;VQSLOD=1.8856;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:27.89:0,28,291	0/0:5,0:5:5.90:0,6,100	0/0:12,0:9:25.16:0,25,406	0/0:13,0:5:8.08:0,8,120	1/1:14,0:14:15.04:175,15,0	1/1:17,0:17:10.93:212,11,0	1/1:6,0:6:3.01:34,3,0	0/0:39,0:39:99:0,107,1420	1/1:7,0:6:4.80:27,5,0	1/1:17,0:17:44.73:467,45,0	1/1:7,0:7:2.92:17,3,0	1/1:5,0:5:9.02:97,9,0	0/0:4,0:4:12.02:0,12,243	1/1:9,0:9:5.21:63,5,0	1/1:7,0:7:3.01:48,3,0	1/1:10,0:10:15.04:165,15,0	1/1:12,0:12:14.91:136,15,0	1/1:15,1:16:26.19:241,26,0	1/1:9,1:7:9.75:148,10,0	1/1:7,0:7:9.02:97,9,0	1/1:3,0:3:2.99:24,3,0	0/0:5,0:5:11.99:0,12,265	0/1:8,0:8:3.53:4,0,398	0/0:4,0:4:12.01:0,12,202	1/1:23,0:23:24.05:264,24,0	1/1:8,0:8:14.80:128,15,0	1/1:17,2:19:38.64:374,39,0	1/1:15,0:15:27.07:338,27,0
chr10	66671370	.	G	GTATA	173.50	PASS	AB=1.000;AC=5;AF=0.093;AN=54;BaseQRankSum=-1.194;DP=295;FS=1.374;HRun=0;HaplotypeScore=113.0116;InbreedingCoeff=0.3665;MQ=49.81;MQ0=3;MQRankSum=1.040;QD=7.54;ReadPosRankSum=-1.177;VQSLOD=2.3359;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:14:12.02:197,12,0	1/1:1,4:5:3.01:76,3,0	./.	0/0:6,0:3:0.89:0,1,2	0/0:14,0:15:21.90:0,22,230	0/0:18,0:18:26.29:0,26,156	0/0:4,0:4:2.94:0,3,18	0/0:41,0:41:78.81:0,79,1235	0/0:4,0:4:2.97:0,3,20	0/0:17,0:17:26.76:0,27,221	0/0:7,0:7:2.98:0,3,21	0/0:7,0:7:5.33:0,5,27	0/1:4,0:4:0.94:1,0,94	0/0:9,0:9:7.36:0,7,58	0/0:9,0:9:2.98:0,3,21	0/0:9,0:9:11.70:0,12,68	0/0:17,0:17:11.39:0,11,71	0/0:19,0:19:29.32:0,29,198	0/0:10,0:8:20.72:0,21,195	0/0:7,0:7:8.79:0,9,52	0/0:4,0:4:2.97:0,3,20	0/0:2,0:2:6.02:0,6,99	0/0:6,0:6:9:0,9,99	0/0:3,0:3:6.02:0,6,98	0/0:18,0:18:23.38:0,23,141	0/0:6,0:6:2.90:0,3,16	0/0:18,0:18:30.20:0,30,167	0/0:12,0:12:17.73:0,18,140
chr10	66671384	.	G	GTA	4225.96	PASS	AB=0.800;AC=36;AF=0.643;AN=56;BaseQRankSum=3.484;DP=283;FS=2.912;HRun=0;HaplotypeScore=72.5053;InbreedingCoeff=0.5580;MQ=52.76;MQ0=2;MQRankSum=-3.051;QD=20.82;ReadPosRankSum=2.370;VQSLOD=5.1699;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:20.47:0,20,193	0/0:4,0:4:2.05:0,2,7	0/0:1,0:1:3:0,3,28	0/0:5,0:1:2.68:0,3,11	0/1:13,0:13:4.47:43,0,4	1/1:15,4:19:39.12:588,39,0	1/1:4,1:5:12.04:184,12,0	0/0:43,0:43:32.40:0,32,1122	1/1:0,4:4:3.01:50,3,0	1/1:6,9:16:30.09:459,30,0	1/1:4,3:7:3.01:50,3,0	1/1:1,6:7:6.02:83,6,0	0/0:6,0:6:16.29:0,16,178	1/1:7,2:9:20.81:290,21,0	1/1:2,7:9:3.01:50,3,0	1/1:1,9:10:12.04:181,12,0	1/1:3,17:20:9.03:142,9,0	1/1:4,13:17:30.02:445,30,0	0/1:3,6:8:16.44:274,0,16	1/1:0,6:6:9.50:132,10,0	1/1:2,0:2:3.01:49,3,0	0/0:2,0:2:3.01:0,3,38	0/0:2,0:2:3.01:0,3,38	0/0:4,0:4:9.03:0,9,112	1/1:9,6:15:24.08:348,24,0	1/1:4,1:5:6.02:95,6,0	1/1:8,9:17:36.12:566,36,0	1/1:6,7:13:14.96:199,15,0
chr10	66672230	.	C	CTT	7139.90	PASS	AB=0.879;AC=41;AF=0.732;AN=56;BaseQRankSum=-2.089;DP=600;FS=7.885;HRun=13;HaplotypeScore=72.9095;InbreedingCoeff=0.6820;MQ=59.25;MQ0=2;MQRankSum=-0.370;QD=14.91;ReadPosRankSum=-3.127;VQSLOD=2.7752;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:32:52.54:0,53,489	0/1:10,0:10:14.79:15,0,161	0/0:7,0:3:5.04:0,5,33	0/1:11,0:8:11.79:12,0,47	1/1:9,29:41:56.10:871,56,0	1/1:2,20:25:41.62:525,42,0	1/1:4,11:15:15.05:197,15,0	0/1:15,1:35:1.34:146,0,1	1/1:5,13:20:15.04:192,15,0	1/1:7,19:26:45.06:571,45,0	1/1:2,12:15:29.46:311,29,0	1/1:6,11:19:14.53:165,15,0	0/0:26,0:25:41.49:0,41,367	1/1:2,0:20:24.81:86,25,0	1/1:6,16:22:24.03:305,24,0	1/1:2,12:14:0.66:299,1,0	1/1:5,13:18:26.88:350,27,0	1/1:5,10:16:17.55:213,18,0	1/1:10,8:20:36.68:366,37,0	1/1:3,22:27:24.11:532,24,0	1/1:2,4:6:6.01:69,6,0	0/0:17,0:17:24.32:0,24,233	0/0:20,0:23:22.55:0,23,328	0/0:14,0:16:31.73:0,32,267	1/1:9,11:23:26.57:322,27,0	1/1:11,27:35:71.66:877,72,0	1/1:13,25:37:29.68:369,30,0	1/1:3,8:14:32.06:347,32,0
chr10	66674208	.	GA	G	800.81	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.693;DP=575;FS=2.891;HRun=2;HaplotypeScore=72.0427;InbreedingCoeff=0.9827;MQ=77.04;MQ0=0;MQRankSum=-0.491;QD=32.03;ReadPosRankSum=-0.019;VQSLOD=3.3457;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:54.18:0,54,808	0/0:9,0:9:27.09:0,27,402	0/0:15,0:15:45.12:0,45,640	0/0:15,0:15:39.12:0,39,542	1/1:0,25:25:69.22:896,69,0	0/0:26,0:26:69.19:0,69,1009	0/0:18,0:18:54.14:0,54,782	0/0:29,0:29:84.26:0,84,1207	0/0:17,0:17:36.08:0,36,514	0/0:18,0:18:54.18:0,54,808	0/0:28,0:28:78.26:0,78,1169	0/0:17,0:17:45.14:0,45,655	0/0:17,0:17:51.13:0,51,739	0/0:22,0:22:54.18:0,54,808	0/0:26,0:26:51.13:0,51,739	0/0:26,0:26:66.22:0,66,989	0/0:23,0:23:60.18:0,60,876	0/0:14,0:14:39.13:0,39,584	0/0:19,0:19:54.18:0,54,787	0/0:28,0:28:81.27:0,81,1203	0/0:11,0:11:33.09:0,33,473	0/0:17,0:17:51.17:0,51,764	0/0:15,0:15:45.15:0,45,674	0/0:16,0:16:45.14:0,45,653	0/0:34,0:34:81.27:0,81,1214	0/0:35,0:35:99:0,102,1468	0/0:26,0:26:66.22:0,66,970	0/0:10,0:10:14.97:0,15,176
chr10	66674281	.	TAAAAAAAACAAAACAAAACAAAA	T	25016.82	PASS	AB=0.969;AC=39;AF=0.696;AN=56;BaseQRankSum=13.261;DP=503;FS=19.788;HRun=0;HaplotypeScore=279.3502;InbreedingCoeff=0.8691;MQ=68.31;MQ0=4;MQRankSum=-9.531;QD=73.58;ReadPosRankSum=7.447;VQSLOD=2.7952;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:69.22:0,69,4925	0/0:5,0:5:15.05:0,15,855	0/0:27,0:14:35.81:0,36,844	0/1:30,0:15:15.54:16,0,459	1/1:15,11:27:57.13:1870,57,0	1/1:1,17:18:21.07:1274,21,0	1/1:2,15:17:15.05:910,15,0	0/0:31,0:31:78.25:0,78,4705	1/1:3,10:13:15.05:910,15,0	1/1:4,19:23:54.15:2299,54,0	1/1:5,8:13:21.07:1022,21,0	1/1:1,15:16:33.11:2002,33,0	0/0:19,0:19:45.15:0,45,3920	1/1:1,16:17:30.10:1820,30,0	1/1:2,20:22:27.09:1638,27,0	1/1:3,13:16:21.07:1274,21,0	1/1:2,6:8:12.04:582,12,0	1/1:5,0:5:8.95:125,9,0	1/1:2,11:13:30.06:935,30,0	1/1:3,19:23:42.10:1872,42,0	1/1:5,0:5:5.96:97,6,0	0/0:16,0:16:42.14:0,42,3709	0/0:22,0:22:54.16:0,54,4640	0/0:16,0:16:36.12:0,36,3025	1/1:3,19:22:33.11:2002,33,0	1/1:2,16:18:45.14:1999,45,0	1/1:3,21:24:30.10:1820,30,0	1/1:0,9:9:9.03:546,9,0
chr10	66674300	.	CA	C	1963.35	PASS	AB=1.000;AC=41;AF=0.759;AN=54;BaseQRankSum=8.804;DP=498;FS=3.928;HRun=12;HaplotypeScore=183.6949;InbreedingCoeff=0.7493;MQ=64.93;MQ0=17;MQRankSum=-6.685;QD=5.05;ReadPosRankSum=4.191;VQSLOD=0.3603;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,30:39:44.06:527,44,0	1/1:2,2:5:8.01:52,8,0	0/1:44,0:15:16.45:16,0,65	0/0:35,2:16:10.58:0,11,67	1/1:14,0:14:15.50:49,15,0	1/1:17,0:17:15.54:49,16,0	1/1:15,0:15:11.10:35,11,0	1/1:13,32:46:62.78:669,63,0	1/1:10,0:10:11.10:35,11,0	1/1:22,0:20:24.33:77,24,0	1/1:8,0:8:11.09:35,11,0	1/1:15,0:15:24.42:77,24,0	0/0:15,0:16:21.07:0,21,377	1/1:16,0:16:22.20:70,22,0	1/1:20,0:20:19.98:63,20,0	1/1:13,0:13:15.54:49,16,0	1/1:7,0:7:6.66:21,7,0	./.	1/1:13,0:12:6.65:21,7,0	1/1:20,0:20:19.98:63,20,0	0/0:4,0:4:0:0,0,0	0/0:14,0:16:47.80:0,48,455	0/0:19,1:20:34.94:0,35,516	0/0:13,1:15:12.57:0,13,274	1/1:19,0:19:24.42:77,24,0	1/1:16,0:16:20.87:64,21,0	1/1:21,0:21:22.20:70,22,0	1/1:9,0:9:6.66:21,7,0
chr10	66679273	.	AT	A	4692.01	PASS	AB=0.698;AC=36;AF=0.643;AN=56;BaseQRankSum=8.279;DP=570;FS=9.406;HRun=13;HaplotypeScore=63.5929;InbreedingCoeff=0.5392;MQ=69.68;MQ0=0;MQRankSum=-2.319;QD=10.74;ReadPosRankSum=4.986;VQSLOD=3.7386;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:25:62.35:0,62,570	0/1:7,1:8:0.88:1,0,154	0/0:13,0:11:7:0,7,166	0/0:11,0:8:10.25:0,10,84	1/1:3,0:25:28.74:88,29,0	1/1:7,21:28:4.26:357,4,0	1/1:8,8:16:5.92:44,6,0	0/1:33,4:38:7.98:8,0,522	0/1:6,9:15:0.57:152,0,1	1/1:6,20:26:50.32:360,50,0	1/1:4,14:19:37.78:268,38,0	0/1:5,14:19:19.42:202,0,19	0/0:22,1:24:35:0,35,478	1/1:6,6:12:8.14:65,8,0	1/1:2,18:20:50.70:372,51,0	1/1:5,11:16:3.13:189,3,0	1/1:1,19:20:41.74:306,42,0	1/1:3,13:16:33.58:259,34,0	1/1:5,12:19:13.64:245,14,0	0/1:6,15:22:7.72:206,0,8	1/1:2,14:16:35.76:263,36,0	0/0:22,0:22:48.06:0,48,460	0/0:18,0:18:44.08:0,44,404	0/0:19,0:20:50.88:0,51,465	1/1:9,22:30:50.17:484,50,0	0/1:14,24:38:8.84:401,0,9	1/1:4,14:19:34.82:247,35,0	1/1:2,12:14:9.48:177,9,0
chr10	66680580	.	TAA	T	9766.68	PASS	AB=0.967;AC=44;AF=0.786;AN=56;BaseQRankSum=0.444;DP=637;FS=0.000;HRun=13;HaplotypeScore=86.8669;InbreedingCoeff=0.8176;MQ=72.32;MQ0=3;MQRankSum=-1.732;QD=19.11;ReadPosRankSum=5.330;VQSLOD=4.2500;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,23:25:53.78:506,54,0	1/1:3,8:13:11.86:216,12,0	0/1:13,0:12:10.07:10,0,68	0/1:12,1:12:5.03:5,0,35	1/1:6,25:32:68.68:643,69,0	1/1:2,23:26:57.01:602,57,0	1/1:7,12:20:32.72:303,33,0	0/0:12,1:33:25.97:0,26,165	1/1:5,24:28:60.04:582,60,0	1/1:4,22:27:68.53:627,69,0	1/1:7,27:35:77.74:738,78,0	1/1:3,19:22:48.01:465,48,0	0/0:20,1:24:31.09:0,31,765	1/1:4,18:23:35.83:399,36,0	1/1:6,19:26:56.75:536,57,0	1/1:5,19:24:56.79:535,57,0	1/1:2,13:16:38.78:361,39,0	1/1:2,6:8:18.02:175,18,0	1/1:6,9:16:26.65:286,27,0	1/1:8,14:23:41.72:387,42,0	1/1:3,13:16:26.35:261,26,0	0/0:22,0:25:71.71:0,72,955	0/0:20,0:23:56.68:0,57,783	0/0:19,0:21:59.12:0,59,722	1/1:2,14:17:32.74:303,33,0	1/1:5,19:24:54:524,54,0	1/1:5,38:44:99:1039,102,0	1/1:4,9:15:23.68:265,24,0
chr10	66681211	.	C	CAAA	6791.72	PASS	AB=1.000;AC=39;AF=0.696;AN=56;BaseQRankSum=5.165;DP=471;FS=9.901;HRun=13;HaplotypeScore=129.7769;InbreedingCoeff=0.7881;MQ=64.39;MQ0=5;MQRankSum=-4.475;QD=20.46;ReadPosRankSum=-5.676;VQSLOD=1.0879;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:20:1.38:0,1,126	0/0:1,0:5:8.79:0,9,53	0/1:14,0:10:3.85:4,0,116	0/0:22,0:11:2.45:0,2,24	1/1:17,0:26:35.97:207,36,0	1/1:13,3:16:39.07:574,39,0	1/1:8,0:9:12.46:115,12,0	0/0:15,0:35:24.76:0,25,266	1/1:9,2:11:23.92:270,24,0	1/1:20,2:24:51.52:610,52,0	1/1:17,2:21:43.53:477,44,0	1/1:7,1:8:8.99:121,9,0	0/0:15,0:15:3.14:0,3,183	1/1:14,2:17:41.90:477,42,0	1/1:11,1:14:27.71:256,28,0	1/1:16,0:16:26.82:243,27,0	1/1:20,1:20:44.82:414,45,0	1/1:10,0:11:22.81:226,23,0	1/1:17,0:17:32.74:375,33,0	1/1:19,3:25:62.93:673,63,0	1/1:3,0:3:2.96:19,3,0	0/0:13,0:13:29.09:0,29,316	0/0:15,0:16:20.34:0,20,301	0/0:13,0:13:20.62:0,21,223	1/1:15,3:18:30.04:365,30,0	1/1:20,2:24:52.43:549,52,0	1/1:17,1:19:44.92:469,45,0	1/1:6,3:10:27.01:347,27,0
chr10	66681229	.	C	CA	6717.68	PASS	AB=0.870;AC=39;AF=0.696;AN=56;BaseQRankSum=2.957;DP=593;FS=8.805;HRun=9;HaplotypeScore=94.0366;InbreedingCoeff=0.7831;MQ=53.41;MQ0=19;MQRankSum=-5.509;QD=14.32;ReadPosRankSum=-0.259;VQSLOD=4.2484;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:41.90:0,42,364	0/0:7,0:7:21:0,21,182	0/1:48,1:11:0.33:0,0,8	0/1:56,0:13:27:27,0,29	1/1:5,21:25:54.96:571,55,0	1/1:7,11:19:42.08:446,42,0	1/1:2,5:7:12.03:132,12,0	0/0:37,0:38:92.75:0,93,805	1/1:4,5:9:15.04:166,15,0	1/1:9,18:29:33.90:552,34,0	1/1:8,16:24:20.04:435,20,0	1/1:12,4:13:20.95:220,21,0	0/0:13,0:13:14.26:0,14,217	1/1:6,14:19:37.58:372,38,0	1/1:8,6:14:24.05:257,24,0	1/1:4,13:17:24.05:265,24,0	1/1:4,15:17:46.85:476,47,0	1/1:6,8:14:31.83:332,32,0	1/1:19,7:23:14.98:300,15,0	1/1:8,15:23:27.49:462,27,0	1/1:3,4:5:3.48:34,3,0	0/0:15,0:15:41.97:0,42,358	0/0:19,0:19:47.82:0,48,395	0/0:11,0:11:23.99:0,24,208	1/1:5,16:21:43.66:445,44,0	1/1:10,17:25:51.13:557,51,0	1/1:18,12:27:48.30:474,48,0	0/1:5,6:11:2.06:192,0,2
chr10	66681830	.	GT	G	8980.13	PASS	AB=0.543;AC=37;AF=0.661;AN=56;BaseQRankSum=12.526;DP=603;FS=4.026;HRun=7;HaplotypeScore=59.6324;InbreedingCoeff=0.9394;MQ=68.54;MQ0=1;MQRankSum=-3.461;QD=22.85;ReadPosRankSum=5.750;VQSLOD=4.5107;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:69.22:0,69,867	0/0:8,0:8:24.08:0,24,301	0/0:32,0:27:46.60:0,47,617	0/0:11,0:11:13.96:0,14,253	1/1:2,21:23:51.11:517,51,0	1/1:2,19:21:51.11:520,51,0	1/1:1,14:15:30.07:306,30,0	0/0:33,0:33:90.28:0,90,1120	1/1:4,22:26:54.12:551,54,0	1/1:1,28:29:78.18:795,78,0	1/1:1,16:17:39.08:398,39,0	0/1:3,16:19:1.59:301,0,2	0/0:23,0:23:66.21:0,66,829	1/1:1,19:20:39.09:398,39,0	1/1:3,16:19:39.09:398,39,0	1/1:2,23:25:54.12:551,54,0	1/1:1,21:22:63.14:643,63,0	1/1:1,19:20:36.08:367,36,0	1/1:4,7:11:21.03:208,21,0	1/1:1,20:21:57.13:580,57,0	1/1:3,20:23:42.09:429,42,0	0/0:24,0:24:72.20:0,72,870	0/0:20,0:20:57.18:0,57,715	0/0:33,0:33:65.52:0,66,931	1/1:2,20:22:54.12:550,54,0	1/1:4,26:30:78.18:796,78,0	1/1:0,27:27:56.73:581,57,0	1/1:0,3:3:9.02:92,9,0
chr10	66682157	.	TA	T	2099.71	PASS	AB=0.895;AC=41;AF=0.732;AN=56;BaseQRankSum=4.044;DP=295;FS=30.941;HRun=11;HaplotypeScore=36.5421;InbreedingCoeff=0.7281;MQ=66.59;MQ0=1;MQRankSum=-9.518;QD=11.11;ReadPosRankSum=4.839;VQSLOD=0.5665;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:12:16.29:47,16,0	1/1:1,0:4:4.07:12,4,0	0/0:11,1:9:6.02:0,6,64	0/0:15,0:15:26.23:0,26,228	0/0:8,0:9:11.86:0,12,110	1/1:2,4:6:5.98:49,6,0	1/1:2,9:11:23.96:197,24,0	0/0:38,1:37:53.55:0,54,775	1/1:3,7:10:17.97:148,18,0	1/1:4,12:16:32.94:271,33,0	1/1:4,6:10:5.93:49,6,0	1/1:2,1:3:2.99:25,3,0	0/1:14,2:17:4.27:4,0,347	1/1:0,9:9:26.96:221,27,0	1/1:2,4:6:11.98:98,12,0	1/1:2,7:9:17.98:148,18,0	1/1:2,6:8:5.98:49,6,0	1/1:3,3:6:5.99:49,6,0	1/1:3,6:10:20.01:154,20,0	1/1:2,9:11:17.96:148,18,0	1/1:0,2:2:5.99:49,6,0	0/0:3,0:3:6.02:0,6,64	0/0:10,0:10:24.06:0,24,256	0/0:18,0:18:39.10:0,39,416	1/1:0,9:9:17.97:148,18,0	1/1:3,3:6:8.98:74,9,0	1/1:2,13:16:34.99:277,35,0	1/1:5,3:8:8.25:73,8,0
chr10	66683127	.	A	AT	4026.22	PASS	AB=0.688;AC=38;AF=0.679;AN=56;BaseQRankSum=-3.549;DP=460;FS=3.308;HRun=14;HaplotypeScore=54.4192;InbreedingCoeff=0.1966;MQ=80.28;MQ0=4;MQRankSum=-0.854;QD=10.27;ReadPosRankSum=1.615;VQSLOD=3.2356;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,22:30:22.72:321,23,0	1/1:2,5:9:1.59:117,2,0	0/0:24,0:12:1.21:0,1,25	0/1:25,0:18:0.71:1,0,47	1/1:21,1:24:29.46:168,29,0	1/1:3,16:20:38.98:339,39,0	0/1:4,6:9:7.37:57,0,7	1/1:9,12:21:36.77:293,37,0	1/1:3,6:9:5.99:50,6,0	1/1:7,7:14:4.74:161,5,0	0/1:9,10:20:41.26:150,0,41	0/1:3,10:14:2.10:135,0,2	0/1:13,1:15:3.22:3,0,93	1/1:4,14:18:20.90:167,21,0	0/1:3,6:9:4.26:91,0,4	0/1:4,8:12:24.81:178,0,25	1/1:4,23:27:41.99:369,42,0	0/1:7,9:17:26.70:144,0,27	1/1:7,3:10:14.29:104,14,0	1/1:8,12:21:3.60:301,4,0	0/1:2,3:5:10.22:44,0,10	0/0:14,0:14:23.47:0,23,151	0/0:14,0:16:37.39:0,37,234	0/0:13,0:13:23.42:0,23,154	1/1:5,15:20:19.73:297,20,0	1/1:5,11:17:19.56:282,20,0	0/1:7,10:16:36.80:85,0,37	1/1:0,7:8:20.82:168,21,0
chr10	66683254	.	A	AAG	2046.14	PASS	AB=0.792;AC=26;AF=0.464;AN=56;BaseQRankSum=-3.096;DP=506;FS=9.250;HRun=0;HaplotypeScore=60.9003;InbreedingCoeff=0.2632;MQ=52.84;MQ0=23;MQRankSum=3.274;QD=6.66;ReadPosRankSum=2.957;VQSLOD=1.7394;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:26:54.33:0,54,417	0/0:6,0:6:13.57:0,14,90	0/0:31,0:9:0.09:0,0,64	0/1:33,0:7:7.44:7,0,37	0/0:27,0:28:32.83:0,33,375	1/1:5,1:17:0.33:85,0,0	1/1:15,0:14:9.23:118,9,0	0/0:37,0:35:52.62:0,53,574	0/1:8,0:8:7.87:62,0,8	1/1:4,11:15:28:261,28,0	1/1:6,0:14:16.46:124,16,0	0/1:4,9:16:20.61:51,0,21	0/0:15,0:15:34.39:0,34,275	0/1:18,0:18:24.43:82,0,24	0/1:2,9:14:16.35:31,0,16	1/1:16,0:15:2.87:129,3,0	1/1:6,2:33:2.68:159,3,0	0/0:3,9:13:2.92:0,3,17	0/1:13,9:20:1.82:196,0,2	1/1:17,0:15:13.88:232,14,0	0/1:8,0:6:11.09:56,0,11	0/0:11,0:11:25.89:0,26,213	0/0:17,0:17:36.05:0,36,268	0/0:14,0:13:30.36:0,30,239	1/1:13,0:13:16.88:222,17,0	0/1:9,10:20:0.36:244,0,0	0/1:5,3:16:3.47:102,0,3	0/1:6,1:4:2.82:61,0,3
chr10	66686105	.	TA	T	15021.67	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=14.501;DP=748;FS=9.736;HRun=5;HaplotypeScore=76.4269;InbreedingCoeff=0.9999;MQ=87.63;MQ0=0;MQRankSum=-6.047;QD=30.22;ReadPosRankSum=3.691;VQSLOD=5.1744;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:75.23:0,75,1005	0/0:14,0:14:42.14:0,42,574	0/0:31,0:31:81.25:0,81,1062	0/0:21,0:21:57.10:0,57,736	0/0:21,0:21:54.18:0,54,737	1/1:1,26:27:75.21:851,75,0	1/1:0,27:27:66.19:746,66,0	0/0:40,0:40:99:0,108,1449	1/1:0,20:20:51.15:579,51,0	1/1:2,32:34:96.27:1088,96,0	1/1:1,23:24:60.17:681,60,0	1/1:0,22:22:60.17:681,60,0	0/0:36,0:36:99:0,108,1462	1/1:1,32:33:87.25:987,87,0	1/1:3,35:38:90.26:1021,90,0	1/1:0,38:38:99:1191,105,0	1/1:1,12:13:36.10:408,36,0	1/1:0,16:16:48.14:544,48,0	1/1:0,30:30:90.24:1011,90,0	1/1:4,25:29:72.20:814,72,0	1/1:0,17:17:39.11:442,39,0	0/0:25,0:25:75.25:0,75,1026	0/0:25,0:25:72.24:0,72,983	0/0:13,0:13:36.12:0,36,484	1/1:1,31:32:90.26:1021,90,0	1/1:3,35:38:99:1188,105,0	1/1:3,33:36:90.26:1021,90,0	1/1:0,23:23:66.19:748,66,0
chr10	66686683	.	GAAA	G	8710.25	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=0.564;DP=581;FS=26.914;HRun=13;HaplotypeScore=81.8850;InbreedingCoeff=0.9695;MQ=57.14;MQ0=20;MQRankSum=-0.405;QD=24.06;ReadPosRankSum=5.242;VQSLOD=1.7298;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:36:65.89:0,66,536	0/0:0,0:11:29.38:0,29,214	0/0:19,0:4:8.93:0,9,76	0/0:22,0:6:10.71:0,11,96	0/0:9,0:18:42.14:0,42,642	1/1:3,19:22:45.10:547,45,0	1/1:3,28:30:54.06:655,54,0	0/0:40,0:42:80.90:0,81,1510	1/1:2,16:18:45.10:547,45,0	1/1:5,13:18:45.12:544,45,0	1/1:1,18:19:45.07:542,45,0	1/1:2,19:20:45.09:547,45,0	0/0:14,0:15:33:0,33,552	1/1:3,11:14:21.01:255,21,0	1/1:3,17:20:39.05:455,39,0	1/1:0,16:17:45.07:528,45,0	1/1:4,19:23:45.03:527,45,0	1/1:5,14:19:35.98:414,36,0	1/1:6,9:13:6.58:270,7,0	1/1:4,19:23:44.26:606,44,0	1/1:2,19:21:32.70:400,33,0	0/0:19,0:20:51.16:0,51,872	0/0:9,0:10:30.08:0,30,529	0/0:19,0:21:51.58:0,52,835	1/1:6,20:26:35.76:437,36,0	1/1:2,19:21:57.15:678,57,0	1/1:3,16:19:22.34:436,22,0	1/1:2,10:10:27.06:323,27,0
chr10	66686878	.	GA	G	9370.88	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=12.491;DP=562;FS=13.179;HRun=8;HaplotypeScore=54.7886;InbreedingCoeff=0.9979;MQ=70.24;MQ0=0;MQRankSum=-0.647;QD=24.40;ReadPosRankSum=2.925;VQSLOD=4.6152;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:51.11:0,51,600	0/0:10,0:10:27.06:0,27,312	0/0:10,0:9:21.06:0,21,253	0/0:10,0:10:24.30:0,24,210	0/0:26,0:26:72.22:0,72,870	1/1:0,11:11:24.04:232,24,0	1/1:1,22:23:57.09:550,57,0	0/0:43,0:43:99:0,99,1173	1/1:2,24:26:72.12:695,72,0	1/1:2,19:21:54:521,54,0	1/1:2,26:28:75.12:724,75,0	1/1:3,15:18:45.07:435,45,0	0/0:17,0:17:51.16:0,51,613	1/1:1,18:19:39.06:376,39,0	1/1:4,22:26:63.09:608,63,0	1/1:3,24:27:66.10:637,66,0	1/1:3,19:22:54.08:520,54,0	1/1:2,26:28:65.99:637,66,0	1/1:0,26:26:78.07:741,78,0	1/1:2,26:28:75.12:724,75,0	1/1:2,14:16:38.85:376,39,0	0/0:13,0:13:33.10:0,33,399	0/0:17,0:17:45.12:0,45,522	0/0:15,0:15:39.10:0,39,459	1/1:1,14:15:36.06:348,36,0	1/1:2,19:21:57.09:551,57,0	1/1:2,20:22:51.08:492,51,0	1/1:0,7:7:21.03:203,21,0
chr10	66686970	.	GAGGA	G	14867.07	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=11.996;DP=516;FS=1.973;HRun=0;HaplotypeScore=94.2460;InbreedingCoeff=0.9902;MQ=75.36;MQ0=0;MQRankSum=-5.303;QD=48.11;ReadPosRankSum=4.263;VQSLOD=5.5115;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:72.20:0,72,1787	0/0:9,0:9:27.09:0,27,688	0/0:14,0:14:23.51:0,24,776	0/0:13,0:13:33.11:0,33,795	0/0:23,0:23:63.22:0,63,1614	1/1:1,12:13:36.12:654,36,0	1/1:1,20:20:57.20:1036,57,0	0/0:36,0:36:84.29:0,84,2157	1/1:2,16:17:45.15:818,45,0	1/1:2,26:28:78.27:1395,78,0	1/1:0,25:25:75.26:1364,75,0	1/1:0,19:19:57.20:1036,57,0	0/0:20,0:20:54.19:0,54,1409	1/1:2,15:17:42.14:764,42,0	1/1:3,18:21:51.17:927,51,0	1/1:2,15:17:45.15:818,45,0	1/1:0,19:19:48.05:873,48,0	1/1:4,11:15:27.09:491,27,0	1/1:0,9:9:27.05:446,27,0	1/1:3,16:19:48.16:873,48,0	1/1:0,3:3:9.03:164,9,0	0/0:25,0:25:72.25:0,72,1827	0/0:23,0:23:66.23:0,66,1686	0/0:16,0:16:48.16:0,48,1237	1/1:1,15:16:42.14:764,42,0	1/1:2,20:22:60.21:1091,60,0	1/1:3,15:18:51.17:920,51,0	1/1:2,7:9:24.08:434,24,0
chr10	66687036	.	AT	A	1176.48	PASS	AB=0.794;AC=34;AF=0.607;AN=56;BaseQRankSum=2.078;DP=471;FS=1.955;HRun=18;HaplotypeScore=75.9526;InbreedingCoeff=0.0317;MQ=58.63;MQ0=26;MQRankSum=-0.562;QD=3.20;ReadPosRankSum=3.521;VQSLOD=-0.4759;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,0:25:24.13:68,24,0	1/1:4,0:7:6.03:17,6,0	0/0:17,0:3:0:0,0,0	0/1:14,0:12:4.19:4,0,28	0/0:19,1:25:23.61:0,24,140	0/1:8,4:14:6.76:42,0,7	1/1:10,5:19:29.51:128,30,0	0/0:35,3:39:14.03:0,14,265	1/1:8,5:14:18.83:93,19,0	1/1:11,5:17:9.99:51,10,0	1/1:13,8:22:7.17:112,7,0	1/1:12,2:12:4.87:75,5,0	0/1:11,2:15:21.94:22,0,68	0/1:11,3:14:12.03:44,0,12	0/1:8,4:14:9.59:52,0,10	1/1:9,3:13:15.21:78,15,0	0/1:17,3:19:33.73:34,0,49	1/1:8,8:14:2.42:87,2,0	0/1:7,4:13:2.31:57,0,2	0/1:7,5:11:29.60:32,0,30	0/0:4,0:3:2.99:0,3,23	0/0:15,1:17:11.21:0,11,157	0/1:12,1:14:14.05:14,0,68	0/1:14,1:16:13.80:14,0,133	0/1:6,3:10:12.12:26,0,12	0/1:16,4:20:43.90:54,0,44	1/1:9,9:16:31.15:160,31,0	1/1:2,5:7:16.36:83,16,0
chr10	66689914	.	G	GA	12752.08	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-16.329;DP=602;FS=4.488;HRun=6;HaplotypeScore=55.0069;InbreedingCoeff=0.9883;MQ=78.06;MQ0=0;MQRankSum=-1.573;QD=32.12;ReadPosRankSum=3.334;VQSLOD=5.2337;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:69.11:0,69,688	0/0:13,0:13:33.01:0,33,324	0/0:17,0:17:45.91:0,46,429	0/0:13,0:13:20.96:0,21,201	0/0:29,0:30:83.20:0,83,825	1/1:2,29:31:75.24:944,75,0	1/1:2,17:19:45.14:566,45,0	0/0:17,0:17:45.09:0,45,453	1/1:0,15:15:42.13:528,42,0	1/1:0,26:26:75.24:942,75,0	1/1:3,22:25:60.19:755,60,0	1/1:0,20:20:57.18:717,57,0	0/0:28,0:28:79.42:0,79,798	1/1:2,20:22:48.15:604,48,0	1/1:4,28:32:78.25:981,78,0	1/1:2,22:25:69.05:845,69,0	1/1:1,30:31:84.27:1057,84,0	1/1:1,18:19:48.15:603,48,0	1/1:4,16:20:48.15:603,48,0	1/1:4,27:31:78.25:979,78,0	1/1:0,5:5:15.05:189,15,0	0/0:27,0:27:72.13:0,72,720	0/0:25,0:25:63.12:0,63,635	0/0:10,0:10:30.07:0,30,306	1/1:0,21:21:60.19:755,60,0	1/1:2,21:23:57.17:703,57,0	1/1:2,26:28:69.22:868,69,0	1/1:1,3:4:9.03:113,9,0
chr10	66692905	.	TTTCA	T	4254.75	PASS	AB=1.000;AC=41;AF=0.732;AN=56;BaseQRankSum=5.162;DP=460;FS=0.000;HRun=0;HaplotypeScore=79.3162;InbreedingCoeff=0.6767;MQ=66.16;MQ0=3;MQRankSum=-3.456;QD=12.66;ReadPosRankSum=-0.196;VQSLOD=4.1908;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:25:5.03:217,5,0	0/1:5,0:5:23.85:39,0,24	0/1:26,0:11:3.92:4,0,278	0/0:31,0:14:36.53:0,37,398	0/1:14,0:13:19.46:155,0,19	1/1:8,1:9:26.85:298,27,0	1/1:7,17:24:26.46:340,26,0	0/0:28,0:28:81.03:0,81,1502	1/1:13,0:12:11.78:92,12,0	1/1:20,0:20:43.69:382,44,0	1/1:15,1:16:34.27:395,34,0	1/1:13,0:13:11.64:75,12,0	0/0:7,0:7:17.96:0,18,370	1/1:7,0:7:18.02:202,18,0	1/1:5,0:5:11.90:92,12,0	1/1:11,0:11:5.75:70,6,0	1/1:33,1:34:29.09:270,29,0	1/1:19,0:19:20.67:173,21,0	1/1:11,0:11:8.30:174,8,0	1/1:13,2:14:31.87:390,32,0	1/1:15,0:15:8.86:82,9,0	0/0:16,0:16:16.96:0,17,737	0/0:19,0:19:41.09:0,41,776	0/0:23,0:23:57.15:0,57,1220	1/1:14,0:14:21.17:156,21,0	1/1:13,1:13:29.67:378,30,0	1/1:18,0:18:13.38:113,13,0	1/1:5,1:6:14.77:157,15,0
chr10	66692906	.	TTCA	T	6166.53	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=4.268;DP=465;FS=0.000;HRun=0;HaplotypeScore=67.8318;InbreedingCoeff=0.8669;MQ=66.71;MQ0=5;MQRankSum=-6.027;QD=19.58;ReadPosRankSum=-1.000;VQSLOD=3.8593;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:26:41.41:416,41,0	1/1:7,0:7:7.99:98,8,0	0/0:26,0:11:1.32:0,1,279	0/0:32,0:15:35.61:0,36,337	1/1:13,0:12:11.04:223,11,0	1/1:8,2:10:30.10:446,30,0	1/1:21,3:24:30.02:372,30,0	0/0:28,0:28:80.53:0,81,1282	1/1:3,10:12:12.04:181,12,0	1/1:6,13:19:45.09:586,45,0	1/1:1,14:15:34.89:446,35,0	1/1:2,11:13:12.04:169,12,0	0/0:7,0:7:15.97:0,16,314	1/1:6,1:7:16.87:230,17,0	1/1:4,1:5:11.40:141,11,0	1/1:12,0:12:6.01:67,6,0	1/1:8,27:34:30.03:378,30,0	1/1:4,15:19:21.06:326,21,0	1/1:2,9:11:6.99:269,7,0	1/1:14,4:16:39.08:534,39,0	1/1:2,12:14:9.03:125,9,0	0/0:16,0:16:35.95:0,36,665	0/0:19,0:19:40.32:0,40,671	0/0:22,0:22:57.14:0,57,1039	1/1:5,9:14:22.86:301,23,0	1/1:13,1:13:30.89:405,31,0	1/1:4,14:18:13.72:227,14,0	1/1:2,4:6:15.04:226,15,0
chr10	66692907	.	TCA	T	6047.82	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=5.533;DP=465;FS=2.681;HRun=0;HaplotypeScore=62.1124;InbreedingCoeff=0.8965;MQ=66.63;MQ0=6;MQRankSum=-4.780;QD=19.20;ReadPosRankSum=-0.903;VQSLOD=4.5201;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:23,1:24:55.22:562,55,0	1/1:7,1:8:20.04:214,20,0	0/0:27,0:11:5.07:0,5,269	0/0:31,0:15:31.68:0,32,321	1/1:14,0:13:16.02:273,16,0	1/1:8,2:10:30.07:363,30,0	1/1:22,2:24:29.94:324,30,0	0/0:28,0:28:79.78:0,80,1175	1/1:10,3:12:12.04:159,12,0	1/1:13,6:19:45.03:605,45,0	1/1:15,0:15:35.14:430,35,0	1/1:11,2:13:11.99:119,12,0	0/0:7,0:7:18.95:0,19,273	1/1:4,3:7:14.87:206,15,0	1/1:4,2:6:11.25:121,11,0	1/1:0,12:12:6.02:85,6,0	1/1:29,5:33:30.06:381,30,0	1/1:16,3:19:21.07:272,21,0	1/1:11,0:11:5.54:250,6,0	1/1:17,1:16:39.11:491,39,0	1/1:12,2:14:9.03:109,9,0	0/0:16,0:16:37.59:0,38,578	0/0:18,0:18:38.55:0,39,588	0/0:22,0:22:57.11:0,57,872	1/1:10,4:14:22.88:285,23,0	1/1:2,12:13:31.61:428,32,0	1/1:14,4:18:14.34:176,14,0	1/1:5,1:6:15.05:197,15,0
chr10	66693506	.	CT	C	8136.16	PASS	AB=0.918;AC=40;AF=0.714;AN=56;BaseQRankSum=12.514;DP=588;FS=9.328;HRun=10;HaplotypeScore=89.7357;InbreedingCoeff=0.8583;MQ=77.34;MQ0=1;MQRankSum=0.705;QD=17.76;ReadPosRankSum=2.983;VQSLOD=5.0636;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:90.24:0,90,995	0/0:7,0:7:21.06:0,21,232	0/1:19,1:18:4.36:4,0,121	0/1:20,1:20:4.46:4,0,160	1/1:3,19:22:53.96:466,54,0	1/1:4,23:28:53.97:469,54,0	1/1:6,20:26:53.97:469,54,0	0/0:30,1:31:40.12:0,40,671	1/1:5,19:24:50.98:443,51,0	1/1:4,14:18:41.45:363,41,0	1/1:2,23:25:62.96:545,63,0	1/1:2,14:16:38.99:339,39,0	0/0:14,0:14:30.07:0,30,325	1/1:4,20:24:53.97:469,54,0	1/1:4,24:28:65.97:573,66,0	1/1:5,14:19:7.69:281,8,0	1/1:1,21:22:56.98:495,57,0	1/1:3,12:15:29.98:260,30,0	1/1:6,12:18:21.99:296,22,0	1/1:2,29:31:59.50:679,59,0	1/1:3,15:19:38.02:319,38,0	0/0:16,0:16:19.29:0,19,378	0/0:20,0:21:62.91:0,63,676	0/0:11,0:11:27.07:0,27,299	1/1:4,17:21:47.98:417,48,0	1/1:3,21:24:62.97:542,63,0	1/1:7,22:29:62.96:547,63,0	1/1:0,6:6:18:156,18,0
chr10	66693983	.	C	CTTTGTTTG	24676.34	PASS	AB=0.677;AC=37;AF=0.661;AN=56;BaseQRankSum=-10.692;DP=642;FS=2.960;HRun=0;HaplotypeScore=135.9804;InbreedingCoeff=0.8957;MQ=54.80;MQ0=6;MQRankSum=-11.568;QD=55.58;ReadPosRankSum=2.043;VQSLOD=4.6400;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:78.20:0,78,1806	0/0:10,0:10:24.08:0,24,613	0/0:24,0:17:15.05:0,15,350	0/0:21,0:15:18.01:0,18,385	1/1:7,0:29:56.83:464,57,0	1/1:11,12:25:33.11:1368,33,0	1/1:8,8:18:21.07:870,21,0	0/0:24,0:24:45.13:0,45,919	1/1:3,13:21:27.09:1122,27,0	1/1:9,11:22:36.10:1421,36,0	1/1:6,9:20:30.10:1044,30,0	1/1:3,16:20:45.15:1869,45,0	0/0:24,0:24:63.19:0,63,1405	1/1:12,11:26:36.12:1481,36,0	1/1:12,19:33:51.17:2118,51,0	1/1:5,13:22:39.13:1620,39,0	0/1:11,4:21:5.28:748,0,5	1/1:11,5:17:12.04:467,12,0	1/1:12,12:25:48.16:1827,48,0	1/1:9,20:32:60.20:2327,60,0	1/1:6,4:12:12.04:491,12,0	0/0:21,0:21:51.12:0,51,1213	0/0:16,0:16:36.11:0,36,864	0/0:23,0:23:48.14:0,48,1129	1/1:13,11:30:30.10:1210,30,0	1/1:7,20:30:66.19:2114,66,0	1/1:9,17:29:45.62:1870,46,0	1/1:3,3:7:2.41:244,2,0
chr10	66694385	.	G	GT	4825.53	PASS	AB=0.725;AC=38;AF=0.679;AN=56;BaseQRankSum=-5.165;DP=521;FS=4.172;HRun=13;HaplotypeScore=64.8192;InbreedingCoeff=0.5327;MQ=76.76;MQ0=0;MQRankSum=-0.293;QD=11.77;ReadPosRankSum=0.634;VQSLOD=4.7791;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:44.06:0,44,295	0/0:6,0:6:11.85:0,12,82	0/0:15,0:16:13.78:0,14,75	0/0:11,0:9:3.71:0,4,41	1/1:4,21:27:32.27:370,32,0	1/1:4,12:16:17.86:154,18,0	1/1:5,18:23:50.92:456,51,0	0/0:18,2:21:0.66:0,1,135	1/1:4,8:13:23.86:209,24,0	1/1:4,12:19:38.76:339,39,0	1/1:3,13:17:27.61:213,28,0	0/1:5,11:16:23.19:91,0,23	0/0:18,1:19:10.63:0,11,214	1/1:4,11:15:7.34:204,7,0	1/1:8,17:25:38.87:345,39,0	0/1:7,16:24:5.25:229,0,5	1/1:3,9:12:21.01:191,21,0	1/1:5,15:21:30.50:276,30,0	1/1:5,8:13:6.40:187,6,0	1/1:11,20:33:20.05:384,20,0	1/1:5,13:18:3.44:174,3,0	0/1:15,4:21:43.29:43,0,132	0/0:12,3:16:7.69:0,8,192	0/1:18,2:21:12.12:12,0,204	1/1:2,18:21:12.36:235,12,0	1/1:2,17:19:35.89:292,36,0	1/1:4,20:24:12.47:258,12,0	1/1:2,8:11:14.18:161,14,0
chr10	66695219	.	AGT	A	4184.43	PASS	AB=0.824;AC=37;AF=0.712;AN=52;BaseQRankSum=2.035;DP=593;FS=5.768;HRun=0;HaplotypeScore=94.9982;InbreedingCoeff=0.0730;MQ=66.62;MQ0=13;MQRankSum=-0.719;QD=8.24;ReadPosRankSum=-1.932;VQSLOD=2.2322;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:18:6.07:0,6,51	0/1:6,1:8:18.28:18,0,86	./.	./.	0/1:7,0:25:6.87:52,0,7	1/1:19,4:23:24.27:244,24,0	1/1:12,9:21:24.05:253,24,0	0/1:33,0:33:7.69:8,0,69	0/1:5,5:10:0.90:58,0,1	1/1:11,15:26:39.83:360,40,0	1/1:12,9:23:14.66:127,15,0	1/1:16,6:24:25.45:245,25,0	0/1:14,1:15:5.10:5,0,300	1/1:8,7:15:13.59:135,14,0	1/1:7,17:24:25.69:297,26,0	1/1:10,17:27:41.95:447,42,0	0/1:20,12:33:16.62:222,0,17	1/1:15,3:16:10.85:106,11,0	1/1:9,8:17:18.03:191,18,0	1/1:8,14:21:18.05:200,18,0	0/1:26,4:28:6.09:291,0,6	0/1:15,0:14:3.17:3,0,349	0/1:12,0:12:21.54:22,0,44	0/0:30,2:31:17.83:0,18,609	0/1:7,10:17:21.56:138,0,22	1/1:31,4:35:27.62:318,28,0	1/1:14,4:18:24.41:220,24,0	0/1:11,5:14:54.59:226,0,55
chr10	66695277	.	GTGTT	G	856.08	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=4.974;DP=739;FS=7.004;HRun=0;HaplotypeScore=151.5765;InbreedingCoeff=0.9977;MQ=71.06;MQ0=8;MQRankSum=-1.471;QD=27.62;ReadPosRankSum=-0.410;VQSLOD=3.1795;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,17:21:35.08:599,35,0	1/1:2,8:10:21.07:377,21,0	0/0:61,0:41:43.04:0,43,2475	0/0:47,0:30:71.94:0,72,1769	0/0:28,0:28:80.86:0,81,1897	0/0:22,0:22:57.20:0,57,1474	0/0:25,0:25:63.10:0,63,1494	0/0:36,0:36:96.33:0,96,2438	0/0:27,0:27:81.28:0,81,2103	0/0:20,0:20:51.17:0,51,1268	0/0:15,0:15:39.13:0,39,994	0/0:23,0:23:63.22:0,63,1545	0/0:19,0:19:51.18:0,51,1296	0/0:21,0:21:60.21:0,60,1477	0/0:29,0:29:75.25:0,75,1869	0/0:37,0:37:99:0,99,2376	0/0:22,0:22:63.17:0,63,1574	0/0:21,0:21:57.03:0,57,1329	0/0:18,0:18:51.03:0,51,1251	0/0:28,0:28:81.24:0,81,2020	0/0:32,0:31:84.27:0,84,2047	0/0:23,0:23:41.24:0,41,1450	0/0:18,0:18:51.18:0,51,1325	0/0:38,0:38:99:0,102,2543	0/0:19,0:19:45.15:0,45,1168	0/0:28,0:28:81.28:0,81,2105	0/0:29,0:28:87.24:0,87,2163	0/0:20,0:20:47.92:0,48,1093
chr10	66696184	.	TTC	T	2757.80	PASS	AB=0.815;AC=36;AF=0.667;AN=54;BaseQRankSum=2.586;DP=615;FS=12.092;HRun=0;HaplotypeScore=91.2810;InbreedingCoeff=0.5144;MQ=59.44;MQ0=19;MQRankSum=1.242;QD=6.47;ReadPosRankSum=1.715;VQSLOD=2.2075;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:18:21.06:0,21,295	0/0:7,0:7:3.95:0,4,48	1/1:35,0:10:1.73:6,2,0	0/0:37,0:9:3.01:0,3,48	0/0:28,0:25:2.41:0,2,38	1/1:6,22:28:12:142,12,0	1/1:13,10:22:12.51:144,13,0	0/1:28,1:29:12.02:12,0,368	1/1:7,16:23:12:127,12,0	1/1:11,3:14:13.89:187,14,0	0/1:5,15:20:8.20:77,0,8	1/1:4,13:18:14.88:153,15,0	0/1:24,0:24:1.03:1,0,304	1/1:12,11:22:2.83:29,3,0	1/1:6,18:24:20.85:194,21,0	1/1:16,3:19:13.36:301,13,0	1/1:6,14:19:12.05:96,12,0	0/1:8,5:12:22.88:126,0,23	1/1:7,10:17:35.89:371,36,0	1/1:12,4:16:23.86:239,24,0	./.	0/0:22,0:21:35.83:0,36,511	0/0:24,0:23:7.54:0,8,464	0/0:21,0:21:33.92:0,34,444	1/1:5,14:19:2.97:35,3,0	1/1:12,10:22:16.02:206,16,0	1/1:9,16:24:29.66:345,30,0	1/1:5,7:12:12.04:142,12,0
chr10	66696208	.	TAC	T	254.35	PASS	AB=0.961;AC=17;AF=0.327;AN=52;BaseQRankSum=3.721;DP=540;FS=28.434;HRun=0;HaplotypeScore=104.8946;InbreedingCoeff=-0.1824;MQ=51.12;MQ0=18;MQRankSum=-0.447;QD=0.79;ReadPosRankSum=0.851;VQSLOD=0.0731;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:15,7:19:0:0,0,0	1/1:6,0:7:11.76:96,12,0	./.	./.	0/1:26,0:26:0.02:1,0,0	0/1:27,0:26:6.45:6,0,74	0/1:20,0:19:18.70:19,0,164	0/0:16,0:16:0:0,0,0	0/1:20,2:22:49.80:50,0,61	0/0:16,0:18:38.83:0,39,315	0/0:22,0:22:12:0,12,120	0/0:24,0:22:10.17:0,10,233	0/1:17,1:18:17.87:18,0,198	0/0:21,1:21:7.88:0,8,138	0/0:27,0:26:14.38:0,14,176	0/1:13,0:13:26.29:26,0,38	0/1:23,0:22:38.14:38,0,78	0/0:10,0:9:6.03:0,6,54	0/1:16,0:15:4.98:5,0,76	0/1:20,0:20:31.84:32,0,125	0/0:27,0:25:9.02:0,9,116	0/0:20,0:19:19.60:0,20,243	0/1:22,0:22:24.32:24,0,163	0/1:21,0:21:2.73:3,0,217	0/1:21,0:21:21.14:21,0,121	0/1:14,0:13:1.32:1,0,187	0/1:22,0:19:51.07:51,0,86	0/0:9,0:8:2.99:0,3,24
chr10	66696475	.	TA	T	5283.17	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=5.649;DP=459;FS=6.399;HRun=10;HaplotypeScore=51.9263;InbreedingCoeff=0.9542;MQ=57.92;MQ0=12;MQRankSum=2.655;QD=19.57;ReadPosRankSum=3.364;VQSLOD=5.6734;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:59.96:0,60,626	0/0:9,0:8:18.05:0,18,198	0/0:17,0:8:10.14:0,10,112	0/0:9,0:5:14.76:0,15,132	0/0:24,0:23:62.92:0,63,628	1/1:2,14:16:38.95:332,39,0	1/1:1,12:13:29.99:260,30,0	0/0:31,1:32:49.09:0,49,742	1/1:1,7:7:15:130,15,0	1/1:2,17:19:44.99:391,45,0	1/1:3,15:18:38.99:338,39,0	1/1:4,7:11:20.99:182,21,0	0/0:18,0:18:45.11:0,45,490	1/1:3,15:17:32.99:286,33,0	1/1:3,13:15:29.99:260,30,0	1/1:0,11:11:32.99:286,33,0	1/1:1,13:14:32.99:286,33,0	1/1:0,18:18:44.99:391,45,0	1/1:3,23:26:59.73:513,60,0	1/1:2,14:16:38.98:339,39,0	1/1:1,8:8:24:208,24,0	0/0:18,0:17:45.02:0,45,467	0/0:21,1:21:25.09:0,25,505	0/0:13,0:13:39.09:0,39,423	1/1:5,13:18:2.77:253,3,0	1/1:5,18:23:53.99:469,54,0	1/1:0,11:11:29.99:260,30,0	1/1:1,4:5:11.95:97,12,0
chr10	66697703	.	G	GCTCC	18018.25	PASS	AB=0.616;AC=38;AF=0.704;AN=54;BaseQRankSum=3.577;DP=574;FS=18.486;HRun=0;HaplotypeScore=105.3208;InbreedingCoeff=0.8583;MQ=51.31;MQ0=23;MQRankSum=-12.918;QD=43.95;ReadPosRankSum=2.424;VQSLOD=4.1258;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,13:18:39.05:1034,39,0	1/1:2,10:7:15.05:399,15,0	0/0:21,0:9:21.07:0,21,387	0/0:21,0:15:23.54:0,24,547	1/1:6,13:12:27.09:700,27,0	1/1:9,14:15:39.13:996,39,0	1/1:9,17:22:57.20:1501,57,0	0/0:21,0:20:45.15:0,45,801	1/1:10,5:9:27.09:662,27,0	1/1:9,13:13:27.09:643,27,0	1/1:1,16:15:30.10:798,30,0	0/1:9,20:19:3.05:1089,0,3	0/0:26,0:24:66.21:0,66,1177	0/1:11,14:19:4.92:1177,0,5	1/1:6,16:17:48.08:1107,48,0	1/1:8,24:26:19.61:1794,20,0	1/1:2,12:11:12.04:293,12,0	1/1:1,7:8:24.08:639,24,0	1/1:5,7:11:24.08:557,24,0	1/1:7,13:15:30.10:769,30,0	1/1:3,7:10:18.06:453,18,0	0/0:25,0:25:69.24:0,69,1285	0/0:21,0:19:54.14:0,54,957	0/0:28,0:28:75.19:0,75,1256	1/1:9,15:17:36.12:942,36,0	1/1:10,20:21:57.20:1410,57,0	1/1:10,16:16:42.14:1055,42,0	./.
chr10	66697723	.	G	GC	668.65	PASS	AB=1.000;AC=27;AF=0.500;AN=54;BaseQRankSum=13.605;DP=567;FS=6.892;HRun=0;HaplotypeScore=108.5221;InbreedingCoeff=0.0492;MQ=40.01;MQ0=47;MQRankSum=-12.819;QD=1.75;ReadPosRankSum=5.110;VQSLOD=0.8428;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:12:18.57:53,19,0	1/1:15,0:8:7.60:22,8,0	0/0:24,0:6:18.06:0,18,251	0/0:25,0:8:21.06:0,21,270	0/1:19,0:8:12.48:12,0,25	0/1:19,0:8:18.22:18,0,27	0/1:15,0:9:5.09:5,0,108	1/1:1,26:15:32.89:378,33,0	1/1:14,0:6:6.48:17,6,0	0/1:17,0:7:2.28:2,0,33	0/1:15,0:10:18.56:19,0,43	0/1:26,0:11:40.03:40,0,55	0/0:30,0:28:78.14:0,78,1045	0/1:24,0:17:29.17:29,0,88	0/1:23,0:17:11.89:38,0,12	0/1:38,0:26:45:45,0,92	1/1:10,0:6:7.15:20,7,0	1/1:6,0:6:3.08:9,3,0	0/0:11,0:7:3.98:0,4,91	0/1:16,0:10:19.74:20,0,26	0/1:4,0:4:3.55:4,0,30	0/0:36,0:35:99:0,102,1373	0/0:27,0:23:69.23:0,69,963	0/0:31,0:31:87.25:0,87,1193	1/1:23,0:12:20.43:58,20,0	0/1:30,0:16:16.15:16,0,49	0/1:25,0:11:5.36:36,0,5	./.
chr10	66697724	.	G	GA	6759.69	PASS	AB=0.569;AC=38;AF=0.704;AN=54;BaseQRankSum=12.357;DP=575;FS=10.044;HRun=2;HaplotypeScore=88.3643;InbreedingCoeff=0.6342;MQ=39.76;MQ0=48;MQRankSum=-13.702;QD=16.82;ReadPosRankSum=2.268;VQSLOD=4.0838;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,14:13:33.11:473,33,0	1/1:2,13:8:15.05:215,15,0	0/0:23,0:6:18.05:0,18,208	0/0:25,0:8:18.05:0,18,214	1/1:4,16:9:12.04:172,12,0	0/1:4,15:8:12.92:277,0,13	1/1:5,11:10:15.05:215,15,0	1/1:29,0:16:32.96:383,33,0	1/1:7,8:7:12.04:172,12,0	1/1:2,15:7:15.05:215,15,0	1/1:5,10:10:20.65:250,21,0	0/1:6,19:11:6.90:352,0,7	0/0:30,0:28:75.16:0,75,885	0/1:8,16:17:3.87:396,0,4	1/1:3,20:17:33.11:472,33,0	0/1:7,31:26:56.84:787,0,57	1/1:3,8:6:12.04:172,12,0	1/1:1,6:7:21.07:298,21,0	1/1:4,7:7:9:108,9,0	1/1:1,15:10:21.07:301,21,0	1/1:1,3:4:6.02:86,6,0	0/0:35,0:34:93.24:0,93,1111	0/0:27,0:23:69.22:0,69,854	0/0:32,0:31:90.13:0,90,1052	1/1:1,23:13:33.11:472,33,0	1/1:4,26:16:39.13:559,39,0	1/1:0,25:11:27.09:386,27,0	./.
chr10	66698474	.	TTAA	T	643.10	PASS	AC=4;AF=0.074;AN=54;BaseQRankSum=5.522;DP=511;FS=0.958;HRun=0;HaplotypeScore=46.4644;InbreedingCoeff=0.5995;MQ=46.00;MQ0=10;MQRankSum=3.032;QD=20.75;ReadPosRankSum=1.492;VQSLOD=2.9016;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:17:33.07:0,33,712	0/0:7,0:7:18.06:0,18,415	1/1:11,0:1:2.04:6,2,0	./.	1/1:0,20:19:45.11:736,45,0	0/0:17,0:13:18.06:0,18,415	0/0:8,0:6:6.02:0,6,138	0/0:38,0:36:99:0,102,2329	0/0:16,0:14:15.05:0,15,339	0/0:25,0:22:66.23:0,66,1505	0/0:28,0:27:66.23:0,66,1509	0/0:16,0:14:12.04:0,12,246	0/0:24,0:23:21.07:0,21,480	0/0:24,0:14:6.02:0,6,138	0/0:12,0:10:3.01:0,3,69	0/0:15,0:12:9.03:0,9,204	0/0:19,0:17:18.02:0,18,356	0/0:11,0:8:12.04:0,12,263	0/0:23,0:16:48.16:0,48,1079	0/0:23,0:22:60.16:0,60,1320	0/0:14,0:13:3.01:0,3,66	0/0:22,0:21:42.14:0,42,969	0/0:26,0:26:63.22:0,63,1451	0/0:16,0:16:36.12:0,36,809	0/0:21,0:20:45.15:0,45,1038	0/0:20,0:11:33.09:0,33,714	0/0:20,0:19:17.72:0,18,415	0/0:10,0:9:15.05:0,15,346
chr10	66698592	.	G	GAATGAGTGTA	17383.38	PASS	AC=36;AF=0.667;AN=54;BaseQRankSum=-6.499;DP=437;FS=121.944;HRun=0;HaplotypeScore=85.0772;InbreedingCoeff=0.9104;MQ=67.22;MQ0=0;MQRankSum=-11.619;QD=60.15;ReadPosRankSum=2.992;VQSLOD=1.7152;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:21:54.17:0,54,1568	0/0:10,0:10:30.10:0,30,907	0/0:17,0:14:14.53:0,15,586	0/0:8,0:5:5.38:0,5,88	1/1:4,21:18:33.11:1577,33,0	1/1:2,10:13:21.07:1083,21,0	1/1:6,1:6:15.04:341,15,0	0/0:34,0:34:90.30:0,90,2456	1/1:6,6:15:27.09:1261,27,0	1/1:4,6:15:36.09:1186,36,0	1/1:10,16:24:54.19:2526,54,0	1/1:2,6:8:15.05:772,15,0	0/0:14,0:14:42.14:0,42,1216	1/1:2,9:9:15.05:680,15,0	1/1:2,7:11:18.06:916,18,0	1/1:2,6:10:9.03:458,9,0	1/1:1,2:9:3.01:156,3,0	1/1:2,4:11:12.04:624,12,0	1/1:4,10:13:36.12:1498,36,0	1/1:5,11:17:30.10:1228,30,0	1/1:5,0:5:8.99:173,9,0	0/0:10,0:10:27.08:0,27,797	0/0:21,0:21:54.18:0,54,1515	0/0:5,0:5:12.04:0,12,386	1/1:3,7:13:18.06:934,18,0	1/1:2,10:8:17.67:569,18,0	1/1:3,11:23:27.09:1403,27,0	./.
chr10	66698957	.	T	TG	18294.36	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-6.637;DP=530;FS=14.879;HRun=0;HaplotypeScore=58.9717;InbreedingCoeff=0.9818;MQ=84.42;MQ0=0;MQRankSum=-7.271;QD=44.30;ReadPosRankSum=2.299;VQSLOD=3.7264;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,24:27:75.25:1181,75,0	1/1:0,4:4:12.04:192,12,0	0/0:22,0:22:66.16:0,66,844	0/0:17,0:17:51.10:0,51,634	1/1:0,18:18:45.15:720,45,0	1/1:0,20:21:57.19:898,57,0	1/1:0,24:24:66.23:1055,66,0	1/1:1,16:17:45.14:696,45,0	1/1:0,17:17:51.17:811,51,0	1/1:1,18:19:57.19:904,57,0	1/1:0,17:17:45.15:705,45,0	1/1:0,16:16:42.14:659,42,0	0/0:24,0:24:72.22:0,72,987	1/1:0,18:18:51.17:815,51,0	1/1:1,28:29:81.28:1276,81,0	1/1:0,18:18:51.17:815,51,0	1/1:0,34:34:99:1578,102,0	1/1:0,21:21:60.20:946,60,0	1/1:0,9:9:27.09:431,27,0	1/1:2,12:14:39.13:621,39,0	1/1:0,33:33:87.30:1386,87,0	0/0:11,0:11:33.11:0,33,461	0/0:13,0:13:36.12:0,36,491	0/0:30,0:30:87.27:0,87,1187	1/1:1,15:16:48.16:767,48,0	1/1:1,11:12:36.11:553,36,0	1/1:2,23:26:72.25:1141,72,0	1/1:0,3:3:9.03:144,9,0
chr10	66699020	.	C	CT	9642.65	PASS	AB=0.583;AC=41;AF=0.732;AN=56;BaseQRankSum=4.427;DP=662;FS=2.650;HRun=10;HaplotypeScore=125.6301;InbreedingCoeff=0.9122;MQ=64.00;MQ0=3;MQRankSum=-7.812;QD=20.87;ReadPosRankSum=1.419;VQSLOD=3.9566;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,28:34:58.50:806,58,0	1/1:4,9:13:23.54:242,24,0	0/0:35,0:22:38.67:0,39,299	0/0:25,0:15:21.74:0,22,151	1/1:12,18:30:41.51:639,42,0	1/1:6,16:23:59.96:607,60,0	1/1:7,16:24:44.06:472,44,0	0/0:42,0:43:79:0,79,727	1/1:5,12:17:42.07:435,42,0	1/1:14,9:23:33.08:347,33,0	1/1:10,11:22:47.93:477,48,0	1/1:4,10:15:35.88:353,36,0	0/0:20,0:20:47.92:0,48,394	1/1:5,11:15:32.82:331,33,0	1/1:5,17:22:32.44:529,32,0	1/1:5,14:19:42.11:447,42,0	1/1:12,19:29:38.48:593,38,0	1/1:13,5:18:18.50:184,18,0	1/1:14,5:19:39.02:384,39,0	1/1:8,18:26:35.51:583,36,0	1/1:13,10:23:39.10:414,39,0	0/0:22,0:22:59.93:0,60,493	0/0:24,0:25:52.27:0,52,423	0/0:25,0:28:71.17:0,71,560	1/1:10,12:21:17.46:391,17,0	0/1:8,18:28:7.81:528,0,8	1/1:11,20:31:56.79:753,57,0	1/1:1,4:5:12.03:127,12,0
chr10	66699039	.	C	CT	7528.52	PASS	AB=0.636;AC=35;AF=0.625;AN=56;BaseQRankSum=11.234;DP=609;FS=1.649;HRun=7;HaplotypeScore=114.7243;InbreedingCoeff=0.8958;MQ=49.22;MQ0=5;MQRankSum=-10.739;QD=20.68;ReadPosRankSum=-0.964;VQSLOD=3.3409;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:38:87.13:0,87,840	0/0:14,0:14:24.50:0,25,233	0/0:16,0:5:2.90:0,3,21	0/0:17,0:6:9.01:0,9,84	0/0:27,0:27:69.10:0,69,664	1/1:7,16:23:54.07:602,54,0	1/1:9,14:21:30.05:344,30,0	0/0:30,0:30:68.99:0,69,639	1/1:9,11:20:42.06:472,42,0	1/1:10,6:16:24.07:287,24,0	1/1:12,6:18:27.07:306,27,0	1/1:5,11:16:10.30:332,10,0	0/0:21,0:21:57.09:0,57,550	1/1:6,9:14:30.04:332,30,0	1/1:10,12:22:33.10:396,33,0	1/1:7,11:18:33.53:370,34,0	1/1:15,15:28:54.16:635,54,0	0/1:6,8:14:1.56:261,0,2	1/1:6,6:12:18.06:216,18,0	1/1:7,22:29:50.95:529,51,0	1/1:6,10:16:35.97:368,36,0	0/0:20,0:20:54.09:0,54,521	0/0:23,0:23:63.09:0,63,606	0/0:37,0:37:74.56:0,75,707	1/1:4,17:20:39.12:468,39,0	1/1:12,19:31:63.14:725,63,0	1/1:15,20:36:67.36:830,67,0	1/1:3,1:4:5.98:56,6,0
chr10	66699762	.	TCCCCC	T	785.10	PASS	AB=0.938;AC=3;AF=0.054;AN=56;BaseQRankSum=5.264;DP=323;FS=31.728;HRun=14;HaplotypeScore=65.7156;InbreedingCoeff=0.3591;MQ=84.68;MQ0=1;MQRankSum=-1.276;QD=17.84;ReadPosRankSum=3.292;VQSLOD=-0.4744;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:14:14.53:0,15,202	0/0:5,0:6:11.47:0,11,218	0/0:19,0:18:8.28:0,8,511	0/1:14,0:14:18.06:18,0,405	1/1:4,25:29:54.07:870,54,0	0/0:14,0:14:17.43:0,17,279	0/0:13,0:13:24.07:0,24,494	0/0:11,0:12:6:0,6,95	0/0:14,0:14:24:0,24,524	0/0:9,0:9:0:0,0,0	0/0:4,0:4:9.03:0,9,190	0/0:15,0:15:21.07:0,21,453	0/0:10,0:11:14.97:0,15,283	0/0:12,0:12:11.28:0,11,211	0/0:5,0:5:15.05:0,15,281	0/0:15,0:15:35.94:0,36,715	0/0:16,0:16:30.10:0,30,582	0/0:3,0:3:3.01:0,3,72	0/0:9,0:9:15:0,15,237	0/0:15,0:15:11.87:0,12,247	0/0:10,0:10:11.28:0,11,233	0/0:11,0:12:12.04:0,12,245	0/0:4,0:4:3:0,3,25	0/0:6,0:6:10.57:0,11,160	0/0:15,0:15:24.07:0,24,448	0/0:7,0:7:6.01:0,6,132	0/0:15,0:17:29.61:0,30,581	0/0:1,0:1:3.01:0,3,59
chr10	66700301	.	ATTCT	A	1218.65	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.040;DP=493;FS=1.655;HRun=0;HaplotypeScore=78.5857;InbreedingCoeff=0.8174;MQ=65.30;MQ0=0;MQRankSum=-1.187;QD=38.08;ReadPosRankSum=0.540;VQSLOD=3.4600;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:78.27:0,78,1893	0/0:7,0:7:18.06:0,18,445	0/0:12,0:12:24.08:0,24,461	0/0:6,0:6:15.03:0,15,362	1/1:2,30:32:77.92:1313,78,0	0/0:18,0:18:39.13:0,39,955	0/0:7,0:7:12.04:0,12,301	0/0:29,0:29:60.20:0,60,1371	0/0:25,0:25:63.22:0,63,1526	0/0:21,0:21:51.18:0,51,1279	0/0:21,0:21:54.16:0,54,1229	0/0:9,0:9:18.06:0,18,445	0/0:21,0:21:54.19:0,54,1254	0/0:21,0:21:57.17:0,57,1281	0/0:15,0:15:36.12:0,36,903	0/0:23,0:23:66.23:0,66,1587	0/0:22,0:22:60.21:0,60,1396	0/0:5,0:5:12.04:0,12,290	0/0:22,0:22:42.12:0,42,941	0/0:27,0:27:66.23:0,66,1645	0/0:2,0:2:6.02:0,6,150	0/0:7,0:7:21.06:0,21,476	0/0:18,0:18:45.15:0,45,1085	0/0:12,0:12:27.09:0,27,677	0/0:25,0:25:63.22:0,63,1538	0/0:24,0:24:63.22:0,63,1563	0/0:27,0:27:60.21:0,60,1503	0/0:5,0:5:15.05:0,15,376
chr10	66700678	.	G	GCA	988.15	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-4.936;DP=556;FS=0.825;HRun=0;HaplotypeScore=65.8236;InbreedingCoeff=0.9981;MQ=79.03;MQ0=0;MQRankSum=-2.043;QD=42.96;ReadPosRankSum=1.634;VQSLOD=5.0306;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:81.22:0,81,1148	0/0:9,0:9:27.09:0,27,398	0/0:21,0:22:43.14:0,43,804	0/0:17,0:17:51.16:0,51,713	1/1:1,22:23:60.20:1083,60,0	0/0:22,0:22:63.20:0,63,907	0/0:22,0:22:66.22:0,66,972	0/0:23,0:23:66.19:0,66,890	0/0:21,0:21:63.21:0,63,928	0/0:26,0:26:75.25:0,75,1105	0/0:19,0:19:54.18:0,54,794	0/0:10,0:10:30.10:0,30,442	0/0:20,0:20:60.13:0,60,836	0/0:19,0:19:57.19:0,57,839	0/0:21,0:21:60.18:0,60,847	0/0:16,0:16:45.14:0,45,645	0/0:28,0:28:78.25:0,78,1128	0/0:14,0:14:42.13:0,42,599	0/0:17,0:17:48.15:0,48,683	0/0:32,0:32:93.29:0,93,1333	0/0:16,0:16:42.14:0,42,619	0/0:13,0:13:39.13:0,39,574	0/0:17,0:17:48.15:0,48,684	0/0:15,0:15:45.15:0,45,661	0/0:18,0:18:54.18:0,54,795	0/0:22,0:22:60.16:0,60,859	0/0:34,0:34:99:0,102,1483	0/0:12,0:12:36.12:0,36,530
chr10	66700787	.	GC	G	6943.97	PASS	AB=0.556;AC=35;AF=0.625;AN=56;BaseQRankSum=1.962;DP=476;FS=9.031;HRun=9;HaplotypeScore=53.7083;InbreedingCoeff=0.9150;MQ=81.63;MQ0=1;MQRankSum=-4.556;QD=21.70;ReadPosRankSum=4.444;VQSLOD=5.1735;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:21:44.92:0,45,483	0/0:5,0:5:15.04:0,15,173	0/0:24,0:23:45.67:0,46,438	0/0:23,0:22:30.54:0,31,343	0/0:2,0:7:14.33:0,14,77	1/1:1,20:21:54.03:494,54,0	1/1:2,16:18:33.01:302,33,0	0/0:24,0:24:54.08:0,54,580	1/1:0,14:14:42.02:384,42,0	1/1:2,22:24:42.74:574,43,0	1/1:1,14:15:42.02:384,42,0	1/1:2,14:16:36.02:329,36,0	0/0:7,0:7:18.05:0,18,208	1/1:2,15:17:39.01:357,39,0	1/1:2,15:17:42.02:383,42,0	1/1:2,23:25:57.03:521,57,0	1/1:1,18:19:39.02:357,39,0	0/1:2,8:10:35.40:116,0,35	1/1:3,21:24:57.02:521,57,0	1/1:1,14:15:33.01:302,33,0	1/1:3,22:25:54.03:494,54,0	0/0:11,0:12:35.94:0,36,395	0/0:18,0:18:45.11:0,45,499	0/0:14,0:15:44.95:0,45,490	1/1:1,14:15:33.02:302,33,0	1/1:0,15:15:45.02:409,45,0	1/1:1,23:24:63.03:577,63,0	1/1:0,6:6:15.01:137,15,0
chr10	66702479	.	ACCAGGC	A	387.01	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.481;DP=425;FS=18.179;HRun=0;HaplotypeScore=107.8496;InbreedingCoeff=0.8181;MQ=90.86;MQ0=2;MQRankSum=-4.140;QD=38.70;ReadPosRankSum=-2.091;VQSLOD=1.8811;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:10:27.09:0,27,916	0/0:3,0:3:3.01:0,3,105	0/0:32,0:32:66.06:0,66,1809	0/0:29,0:28:78.27:0,78,2418	1/1:3,7:10:21.07:479,21,0	0/0:12,0:12:36.12:0,36,1191	0/0:21,0:21:63.22:0,63,2156	0/0:14,0:14:39.12:0,39,1068	0/0:14,0:14:36.12:0,36,1105	0/0:12,0:12:30.10:0,30,1027	0/0:9,0:9:24.08:0,24,815	0/0:12,0:12:33.10:0,33,1048	0/0:11,0:11:30.10:0,30,996	0/0:18,0:18:51.18:0,51,1748	0/0:11,0:11:30.10:0,30,1009	0/0:11,0:11:30.10:0,30,1019	0/0:11,0:11:27.09:0,27,920	0/0:21,0:21:51.12:0,51,1555	0/0:19,0:19:42.14:0,42,1389	0/0:13,0:13:36.12:0,36,1254	0/0:33,0:32:84.29:0,84,2862	0/0:16,0:16:45.15:0,45,1549	0/0:9,0:9:27.09:0,27,916	0/0:35,0:35:93.26:0,93,3110	0/0:10,0:10:30.10:0,30,1046	0/0:12,0:12:27.09:0,27,941	0/0:11,0:11:33.11:0,33,1102	0/0:5,0:5:12.04:0,12,418
chr10	66702938	.	GCC	G	6941.94	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-1.183;DP=397;FS=25.028;HRun=11;HaplotypeScore=56.3930;InbreedingCoeff=0.8985;MQ=79.84;MQ0=2;MQRankSum=-1.729;QD=22.11;ReadPosRankSum=4.088;VQSLOD=2.2343;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:14:17.53:0,18,215	0/0:3,0:3:6.02:0,6,92	0/0:21,0:16:21.01:0,21,245	0/0:12,0:12:17.24:0,17,202	1/1:3,0:21:41.08:178,41,0	1/1:1,18:19:45.11:479,45,0	1/1:1,14:15:33.08:351,33,0	0/0:11,0:11:12.01:0,12,137	1/1:1,14:15:36.09:383,36,0	1/1:3,15:19:47.84:484,48,0	1/1:2,8:10:18.04:192,18,0	1/1:1,11:12:21.03:223,21,0	0/0:6,0:6:18.06:0,18,277	1/1:0,8:8:24.06:255,24,0	1/1:2,21:22:51.12:543,51,0	1/1:0,15:15:39.10:415,39,0	1/1:4,18:22:42.08:447,42,0	1/1:2,9:11:27.06:287,27,0	1/1:3,10:13:26.89:251,27,0	1/1:3,7:10:2.06:173,2,0	1/1:4,22:26:54.12:575,54,0	0/0:3,0:3:3.01:0,3,46	0/0:6,0:9:22.54:0,23,257	0/0:2,0:3:8.50:0,9,81	1/1:2,14:16:39.09:415,39,0	1/1:6,21:27:63.09:652,63,0	1/1:3,17:20:45.04:479,45,0	1/1:5,7:11:15.01:160,15,0
chr10	66703574	.	T	TTGTG	811.54	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-0.892;DP=642;FS=5.121;HRun=0;HaplotypeScore=107.3562;InbreedingCoeff=0.9322;MQ=70.51;MQ0=1;MQRankSum=-0.845;QD=31.21;ReadPosRankSum=-0.671;VQSLOD=2.9645;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:87.26:0,87,1359	0/0:7,0:7:18.06:0,18,297	0/0:40,0:30:27.04:0,27,319	0/0:31,0:21:11.78:0,12,157	1/1:9,14:26:41.61:906,42,0	0/0:20,0:21:54.16:0,54,840	0/0:15,0:15:30.10:0,30,495	0/0:33,0:33:51.16:0,51,816	0/0:29,0:29:63.21:0,63,1017	0/0:30,0:30:72.23:0,72,1125	0/0:15,0:15:30.08:0,30,448	0/0:23,0:23:45.15:0,45,743	0/0:23,0:23:48.14:0,48,743	0/0:17,0:17:36.11:0,36,570	0/0:26,0:26:51.17:0,51,842	0/0:17,0:17:36.10:0,36,547	0/0:30,0:30:60.15:0,60,960	0/0:11,0:11:16.11:0,16,339	0/0:18,0:18:30.09:0,30,473	0/0:21,0:21:51.17:0,51,818	0/0:25,0:25:45.12:0,45,694	0/0:29,0:29:71.34:0,71,1116	0/0:22,0:22:42.14:0,42,693	0/0:21,0:21:28.13:0,28,671	0/0:21,0:21:48.16:0,48,771	0/0:19,0:19:33.10:0,33,522	0/0:25,0:25:69.23:0,69,1115	0/0:8,0:8:15.05:0,15,248
chr10	66704173	.	C	CTG	1048.94	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-3.563;DP=859;FS=1.624;HRun=0;HaplotypeScore=100.2691;InbreedingCoeff=0.9999;MQ=64.69;MQ0=4;MQRankSum=-0.820;QD=26.90;ReadPosRankSum=2.059;VQSLOD=5.0393;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:27:75.07:0,75,920	0/0:17,0:17:48.14:0,48,588	0/0:35,0:25:56.63:0,57,657	0/0:29,0:25:41.80:0,42,632	1/1:7,32:38:69.24:1144,69,0	0/0:23,0:23:42.11:0,42,503	0/0:39,0:38:47.34:0,47,1078	0/0:46,0:47:99:0,99,1224	0/0:36,0:36:99:0,105,1286	0/0:30,0:30:75.22:0,75,921	0/0:21,0:21:51.16:0,51,639	0/0:31,0:31:81.25:0,81,1008	0/0:31,0:31:84.23:0,84,1041	0/0:32,0:32:81.26:0,81,1021	0/0:27,0:27:78.22:0,78,956	0/0:35,0:35:96.31:0,96,1211	0/0:41,0:41:99:0,108,1362	0/0:18,0:19:43.94:0,44,522	0/0:23,0:23:45.14:0,45,568	0/0:35,0:35:81.19:0,81,976	0/0:48,0:47:99:0,126,1555	0/0:29,0:29:78.24:0,78,970	0/0:20,0:20:51.13:0,51,614	0/0:21,0:22:54:0,54,656	0/0:25,0:25:66.21:0,66,833	0/0:35,0:36:99:0,99,1214	0/0:35,0:36:93.13:0,93,1146	0/0:26,0:26:72.23:0,72,908
chr10	66704794	.	TAATAAATA	T	2044.89	PASS	AB=1.000;AC=27;AF=0.711;AN=38;BaseQRankSum=-0.606;DP=250;FS=2.829;HRun=0;HaplotypeScore=61.5565;InbreedingCoeff=0.4744;MQ=48.35;MQ0=11;MQRankSum=-2.722;QD=14.82;ReadPosRankSum=0.567;VQSLOD=1.4660;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,6:14:6.02:149,6,0	1/1:3,0:3:3:26,3,0	./.	./.	0/0:8,0:12:11.97:0,12,98	1/1:1,2:3:6.02:150,6,0	./.	0/0:35,0:24:11.99:0,12,123	1/1:4,1:5:3.01:75,3,0	1/1:7,1:8:3.01:75,3,0	1/1:11,4:15:8.06:132,8,0	0/0:2,0:4:6:0,6,74	./.	0/0:6,0:6:3.01:0,3,30	1/1:4,4:8:12.04:268,12,0	./.	1/1:8,9:17:11.16:287,11,0	0/1:14,0:14:32.71:65,0,33	1/1:9,7:13:18.06:404,18,0	./.	./.	./.	0/0:7,0:7:6.02:0,6,246	./.	1/1:6,5:11:9.03:188,9,0	1/1:4,1:5:3.01:75,3,0	1/1:8,5:12:7.82:223,8,0	1/1:5,1:6:3.01:64,3,0
chr10	66705004	.	C	CTCTCT	1077.34	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=0.592;DP=538;FS=8.021;HRun=0;HaplotypeScore=103.3310;InbreedingCoeff=0.9704;MQ=67.87;MQ0=0;MQRankSum=-4.650;QD=59.85;ReadPosRankSum=-1.413;VQSLOD=3.7180;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,111,2283	0/0:6,0:6:18.06:0,18,391	0/0:18,0:18:51.14:0,51,927	0/0:21,0:20:47.98:0,48,790	1/1:3,15:18:42.61:1172,43,0	0/0:16,0:16:39.12:0,39,781	0/0:23,0:23:66.23:0,66,1385	0/0:31,0:31:87.28:0,87,1822	0/0:16,0:16:45.15:0,45,977	0/0:14,0:14:42.14:0,42,856	0/0:9,0:9:27.09:0,27,561	0/0:24,0:24:66.22:0,66,1374	0/0:19,0:19:54.19:0,54,1173	0/0:29,0:29:84.29:0,84,1798	0/0:36,0:36:99:0,105,2189	0/0:13,0:13:39.12:0,39,776	0/0:33,0:33:93.25:0,93,1922	0/0:24,0:24:69.19:0,69,1412	0/0:14,0:14:42.14:0,42,879	0/0:16,0:16:48.15:0,48,974	0/0:41,0:41:99:0,108,2301	0/0:14,0:14:42.14:0,42,912	0/0:11,0:11:33.11:0,33,717	0/0:17,0:17:51.18:0,51,1103	0/0:8,0:8:21.07:0,21,456	0/0:11,0:11:27.09:0,27,586	0/0:13,0:13:36.12:0,36,756	0/0:5,0:5:15.05:0,15,326
chr10	66705665	.	C	CT	493.89	PASS	AB=1.000;AC=4;AF=0.071;AN=56;BaseQRankSum=-0.281;DP=547;FS=0.787;HRun=9;HaplotypeScore=55.9944;InbreedingCoeff=0.4283;MQ=70.49;MQ0=1;MQRankSum=0.083;QD=10.74;ReadPosRankSum=-0.637;VQSLOD=2.1756;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:26.99:0,27,234	0/0:13,0:13:35.97:0,36,309	0/0:19,0:15:3.57:0,4,166	0/1:15,0:11:26.73:27,0,73	1/1:5,19:24:54.06:570,54,0	0/0:20,0:20:50.99:0,51,443	0/0:12,0:12:26.99:0,27,234	0/0:32,0:32:74.97:0,75,649	0/0:16,0:16:38.97:0,39,339	0/0:24,0:24:62.98:0,63,545	0/0:39,0:39:86.89:0,87,745	0/0:17,0:17:47.98:0,48,417	0/0:19,1:20:17.81:0,18,383	0/0:20,0:20:53.97:0,54,465	0/0:25,0:25:65.98:0,66,573	0/0:17,0:17:47.99:0,48,417	0/0:17,0:17:38.97:0,39,335	0/1:7,0:7:8.73:9,0,66	0/0:21,0:21:35.97:0,36,313	0/0:29,0:29:74.98:0,75,651	0/0:11,0:11:29.99:0,30,260	0/0:14,0:14:32.98:0,33,286	0/0:26,0:27:68.01:0,68,579	0/0:14,0:14:35.99:0,36,313	0/0:21,0:22:53.02:0,53,449	0/0:23,0:23:65.97:0,66,570	0/0:31,0:31:80.96:0,81,702	0/0:8,0:8:14.67:0,15,115
chr10	66705933	.	T	TGGGAGG	1215.20	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-0.832;DP=526;FS=0.943;HRun=0;HaplotypeScore=117.9691;InbreedingCoeff=0.8294;MQ=74.83;MQ0=0;MQRankSum=-4.277;QD=43.40;ReadPosRankSum=-1.737;VQSLOD=3.1189;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:27.09:0,27,576	0/0:3,0:3:9.03:0,9,192	0/0:26,0:23:29.71:0,30,594	0/0:19,0:17:18.40:0,18,297	1/1:10,13:28:42.10:1310,42,0	0/0:22,0:22:51.16:0,51,1049	0/0:17,0:17:42.09:0,42,759	0/0:29,0:29:53.95:0,54,1015	0/0:5,0:5:12.04:0,12,256	0/0:25,0:25:57.19:0,57,1179	0/0:20,0:20:54.17:0,54,1104	0/0:11,0:11:33.10:0,33,664	0/0:18,0:18:42.14:0,42,881	0/0:18,0:18:42.13:0,42,839	0/0:18,0:18:42.13:0,42,857	0/0:23,0:22:63.20:0,63,1290	0/0:17,0:16:45.15:0,45,959	0/0:12,0:12:27.09:0,27,576	0/0:19,0:19:39.13:0,39,802	0/0:21,0:21:42.14:0,42,896	0/0:25,0:25:66.20:0,66,1339	0/0:22,0:22:54.16:0,54,1081	0/0:17,0:17:51.13:0,51,940	0/0:16,0:16:36.09:0,36,726	0/0:29,0:29:60.83:0,61,1283	0/0:24,0:24:60.19:0,60,1230	0/0:25,0:25:72.23:0,72,1477	0/0:4,0:4:6.02:0,6,128
chr10	66706032	.	T	TTGTG	19518.34	PASS	AB=0.848;AC=44;AF=0.786;AN=56;BaseQRankSum=-5.984;DP=560;FS=6.345;HRun=0;HaplotypeScore=92.8130;InbreedingCoeff=0.7641;MQ=66.10;MQ0=2;MQRankSum=-2.273;QD=40.49;ReadPosRankSum=1.777;VQSLOD=5.0741;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,14:25:41.17:923,41,0	1/1:5,1:6:5.83:126,6,0	0/1:13,0:7:5.95:6,0,91	0/0:16,0:11:8.51:0,9,86	0/1:9,0:16:68.37:68,0,119	1/1:12,21:33:60.21:1478,60,0	1/1:4,8:12:24.08:582,24,0	1/1:18,0:31:36.30:183,36,0	1/1:3,12:16:35.86:826,36,0	1/1:8,15:25:60.17:1296,60,0	1/1:5,19:25:47.90:1041,48,0	1/1:2,15:17:45.15:1109,45,0	0/0:28,0:28:63.21:0,63,1023	1/1:4,12:18:44.89:1040,45,0	1/1:7,20:28:62.95:1469,63,0	1/1:7,2:21:30.10:546,30,0	1/1:7,16:22:53.30:1149,53,0	1/1:8,14:23:41.97:975,42,0	1/1:12,8:21:35.76:700,36,0	1/1:2,12:14:36.12:881,36,0	1/1:8,13:23:32.85:751,33,0	0/0:5,0:5:9.02:0,9,128	0/0:12,0:12:27.04:0,27,418	0/0:17,0:17:33.11:0,33,549	1/1:2,16:19:48.15:1134,48,0	1/1:6,12:20:48.14:1088,48,0	1/1:6,20:26:54.17:1322,54,0	1/1:8,12:27:35.45:825,35,0
chr10	66707595	.	C	CT	2853.45	PASS	AB=0.742;AC=35;AF=0.625;AN=56;BaseQRankSum=-2.300;DP=511;FS=1.009;HRun=14;HaplotypeScore=74.2341;InbreedingCoeff=0.2234;MQ=79.65;MQ0=3;MQRankSum=-2.150;QD=7.10;ReadPosRankSum=1.118;VQSLOD=2.8123;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:33,3:37:27.25:27,0,311	0/0:5,0:5:8.82:0,9,57	0/0:28,1:21:1.99:0,2,28	0/1:23,0:18:4.79:5,0,47	1/1:3,0:27:27.51:131,28,0	1/1:4,6:11:1.57:127,2,0	1/1:2,5:8:11.19:126,11,0	0/0:33,0:37:62.46:0,62,355	1/1:3,10:13:12:105,12,0	1/1:5,14:21:8.48:158,8,0	1/1:4,9:13:7.73:192,8,0	1/1:8,13:21:10.62:74,11,0	0/0:7,0:8:9.41:0,9,48	1/1:18,2:20:37.29:275,37,0	1/1:6,9:16:14.84:120,15,0	0/1:7,6:12:20.68:76,0,21	0/1:17,22:45:21.21:308,0,21	1/1:7,11:18:43.15:364,43,0	0/1:5,10:14:17.91:82,0,18	1/1:2,3:6:17.83:142,18,0	1/1:9,1:11:8.14:80,8,0	0/0:13,0:13:23.56:0,24,151	0/1:12,2:14:55.78:56,0,84	0/0:17,0:17:26.50:0,26,172	0/1:4,3:7:11.68:65,0,12	1/1:22,7:29:32.98:285,33,0	0/1:9,13:22:16.46:133,0,16	0/1:5,7:12:17.56:106,0,18
chr10	66708124	.	CTTATG	C	1445.91	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.224;DP=603;FS=1.700;HRun=0;HaplotypeScore=110.6522;InbreedingCoeff=0.9907;MQ=75.14;MQ0=0;MQRankSum=-0.963;QD=51.64;ReadPosRankSum=0.557;VQSLOD=3.7050;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:69.24:0,69,2247	0/0:9,0:9:27.09:0,27,899	0/0:21,0:18:51.17:0,51,1497	0/0:8,0:8:20.94:0,21,514	1/1:0,28:28:72.24:1541,72,0	0/0:36,0:36:99:0,108,3477	0/0:8,0:8:24.08:0,24,799	0/0:31,0:31:87.29:0,87,2544	0/0:24,0:24:72.25:0,72,2202	0/0:27,0:27:81.28:0,81,2647	0/0:23,0:23:66.23:0,66,2126	0/0:23,0:23:69.24:0,69,2240	0/0:21,0:21:63.22:0,63,2091	0/0:16,0:16:48.16:0,48,1574	0/0:26,0:26:78.25:0,78,2453	0/0:19,0:19:57.20:0,57,1801	0/0:19,0:19:57.20:0,57,1897	0/0:15,0:15:45.07:0,45,1416	0/0:14,0:14:42.12:0,42,1101	0/0:25,0:25:75.26:0,75,2495	0/0:16,0:16:48.16:0,48,1540	0/0:18,0:18:51.18:0,51,1535	0/0:29,0:29:87.30:0,87,2711	0/0:12,0:12:36.12:0,36,1183	0/0:33,0:33:99:0,99,3200	0/0:34,0:33:99:0,102,3184	0/0:37,0:37:99:0,111,3691	0/0:8,0:8:24.08:0,24,799
chr10	66708711	.	CA	C	1150.93	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.493;DP=773;FS=17.594;HRun=2;HaplotypeScore=73.3688;InbreedingCoeff=0.9995;MQ=81.66;MQ0=0;MQRankSum=-2.141;QD=34.88;ReadPosRankSum=-0.294;VQSLOD=1.8121;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,105,1563	0/0:10,0:10:30.09:0,30,430	0/0:22,0:22:60.20:0,60,891	0/0:23,0:23:66.22:0,66,950	1/1:0,33:33:96.31:1246,96,0	0/0:20,0:20:60.20:0,60,899	0/0:22,0:22:66.22:0,66,989	0/0:32,0:32:93.31:0,93,1374	0/0:35,0:35:99:0,105,1574	0/0:36,0:36:99:0,108,1597	0/0:17,0:17:51.17:0,51,765	0/0:29,0:29:87.29:0,87,1282	0/0:33,0:33:99:0,99,1477	0/0:39,0:39:99:0,114,1678	0/0:40,0:40:99:0,120,1762	0/0:28,0:28:81.26:0,81,1193	0/0:16,0:16:48.12:0,48,673	0/0:18,0:18:54.15:0,54,763	0/0:18,0:18:54.14:0,54,785	0/0:29,0:29:84.25:0,84,1198	0/0:52,0:51:99:0,154,2265	0/0:27,0:27:81.27:0,81,1203	0/0:27,0:27:78.26:0,78,1165	0/0:29,0:29:81.27:0,81,1206	0/0:20,0:20:57.19:0,57,850	0/0:39,0:39:99:0,117,1744	0/0:26,0:26:78.26:0,78,1169	0/0:16,0:16:48.15:0,48,698
chr10	66708806	.	TAA	T	5090.46	PASS	AB=0.645;AC=35;AF=0.625;AN=56;BaseQRankSum=5.747;DP=641;FS=22.448;HRun=16;HaplotypeScore=85.0076;InbreedingCoeff=0.8951;MQ=72.59;MQ0=1;MQRankSum=0.889;QD=11.84;ReadPosRankSum=8.345;VQSLOD=1.5084;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:31:71.46:0,71,693	0/0:7,0:8:18.03:0,18,197	0/0:28,0:15:23.77:0,24,191	0/0:22,0:21:17.30:0,17,144	0/0:11,0:14:35.72:0,36,297	1/1:8,13:22:11.54:239,12,0	1/1:8,9:19:23.51:187,24,0	0/0:35,0:36:70.86:0,71,748	1/1:7,19:26:44.81:376,45,0	1/1:15,10:25:26.53:220,27,0	1/1:8,8:17:11.70:142,12,0	1/1:7,13:21:3.31:164,3,0	0/0:17,0:19:44.31:0,44,408	1/1:10,16:26:47.74:400,48,0	1/1:10,19:30:32.40:262,32,0	1/1:7,24:31:50.70:426,51,0	1/1:8,15:25:47.12:375,47,0	1/1:8,17:25:41.73:351,42,0	0/1:9,10:20:0.86:200,0,1	1/1:8,16:25:32.09:262,32,0	1/1:8,16:27:38.46:313,38,0	0/0:14,0:16:26.39:0,26,263	0/0:19,0:19:36.04:0,36,406	0/0:15,0:18:27.01:0,27,306	1/1:6,19:26:47.67:401,48,0	1/1:13,15:28:32.48:315,32,0	1/1:6,23:31:36.33:433,36,0	1/1:3,3:6:2.96:25,3,0
chr10	66709265	.	CTT	C	5262.39	PASS	AB=0.585;AC=36;AF=0.643;AN=56;BaseQRankSum=0.898;DP=455;FS=12.868;HRun=14;HaplotypeScore=68.9225;InbreedingCoeff=0.7399;MQ=68.41;MQ0=5;MQRankSum=-0.387;QD=16.19;ReadPosRankSum=6.842;VQSLOD=2.1719;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:23:56.95:0,57,648	0/0:2,0:3:5.51:0,6,51	0/0:25,0:13:1.69:0,2,121	0/0:24,0:12:10.39:0,10,122	1/1:5,10:17:30.13:270,30,0	1/1:4,11:15:26.68:233,27,0	1/1:3,13:16:39.02:359,39,0	0/0:27,0:26:51.06:0,51,605	1/1:4,9:13:23.97:222,24,0	1/1:8,10:19:5.10:232,5,0	0/1:4,13:18:6.85:260,0,7	1/1:3,7:10:20.99:194,21,0	0/0:6,0:9:17.53:0,18,201	1/1:2,9:11:26.76:234,27,0	1/1:2,9:11:24:222,24,0	1/1:4,13:17:12.52:306,13,0	1/1:6,19:26:53.43:468,53,0	1/1:3,15:17:32.76:289,33,0	1/1:10,13:24:32.65:339,33,0	1/1:3,12:19:10.84:280,11,0	1/1:4,4:9:5.81:102,6,0	0/0:3,0:3:9.02:0,9,108	0/0:7,0:8:23.05:0,23,268	0/0:4,0:5:11.49:0,11,98	1/1:5,14:20:41.66:354,42,0	1/1:1,11:15:43.95:351,44,0	1/1:8,13:25:43.62:336,44,0	0/1:6,9:17:15.68:210,0,16
chr10	66709287	.	CTAGTTT	C	315.84	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.283;DP=458;FS=2.915;HRun=0;HaplotypeScore=118.1700;InbreedingCoeff=0.8118;MQ=72.64;MQ0=4;MQRankSum=-3.603;QD=21.06;ReadPosRankSum=-1.051;VQSLOD=2.8063;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:24:66.20:0,66,2066	0/0:5,0:5:15.05:0,15,522	0/0:29,0:18:7.36:0,7,448	0/0:29,0:17:18.27:0,18,413	1/1:5,10:14:18.06:406,18,0	0/0:13,0:13:30.10:0,30,942	0/0:14,0:14:42.11:0,42,967	0/0:38,0:38:99:0,105,3430	0/0:10,0:10:27.09:0,27,800	0/0:19,0:17:45.15:0,45,1341	0/0:17,0:17:48.16:0,48,1413	0/0:10,0:10:30.10:0,30,1019	0/0:10,0:10:23.87:0,24,699	0/0:17,0:16:48.15:0,48,1415	0/0:14,0:14:42.14:0,42,1378	0/0:17,0:17:45.15:0,45,1363	0/0:28,0:27:66.21:0,66,2090	0/0:16,0:15:33.11:0,33,977	0/0:23,0:23:66.23:0,66,1942	0/0:20,0:20:54.18:0,54,1712	0/0:8,0:8:21.07:0,21,518	0/0:3,0:3:9.03:0,9,259	0/0:5,0:5:15.04:0,15,447	0/0:4,0:4:12.04:0,12,364	0/0:15,0:15:36.12:0,36,1082	0/0:20,0:20:60.21:0,60,1924	0/0:19,0:19:51.18:0,51,1638	0/0:15,0:15:42.14:0,42,1417
chr10	66709740	.	G	GGA	1532.18	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-6.813;DP=648;FS=1.556;HRun=0;HaplotypeScore=72.0140;InbreedingCoeff=0.8284;MQ=71.09;MQ0=0;MQRankSum=-1.609;QD=47.88;ReadPosRankSum=0.139;VQSLOD=4.6411;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,99,1436	0/0:4,0:4:12.02:0,12,156	0/0:24,0:24:66.14:0,66,899	0/0:24,0:24:60.11:0,60,841	1/1:1,31:32:87.30:1627,87,0	0/0:27,0:27:75.25:0,75,1101	0/0:19,0:19:57.18:0,57,819	0/0:36,0:36:99:0,102,1423	0/0:25,0:25:72.24:0,72,1060	0/0:26,0:26:75.25:0,75,1105	0/0:19,0:19:54.17:0,54,773	0/0:23,0:23:66.21:0,66,952	0/0:20,0:20:54.18:0,54,794	0/0:25,0:25:75.24:0,75,1082	0/0:26,0:26:78.26:0,78,1148	0/0:22,0:22:60.16:0,60,859	0/0:23,0:23:66.21:0,66,952	0/0:13,0:14:39.13:0,39,569	0/0:25,0:25:69.23:0,69,1016	0/0:23,0:23:69.23:0,69,1000	0/0:42,0:42:99:0,126,1817	0/0:16,0:16:45.13:0,45,640	0/0:11,0:11:33.11:0,33,482	0/0:32,0:32:93.22:0,93,1324	0/0:18,0:18:51.12:0,51,726	0/0:22,0:22:63.21:0,63,912	0/0:34,0:34:99:0,102,1477	0/0:1,0:1:3.01:0,3,44
chr10	66711532	.	TA	T	10115.41	PASS	AB=0.545;AC=37;AF=0.661;AN=56;BaseQRankSum=11.229;DP=627;FS=2.448;HRun=9;HaplotypeScore=63.3717;InbreedingCoeff=0.8998;MQ=75.19;MQ0=0;MQRankSum=-0.988;QD=22.94;ReadPosRankSum=3.873;VQSLOD=5.7412;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:81.23:0,81,924	0/0:12,0:12:27.08:0,27,312	0/0:13,0:13:27.07:0,27,298	0/0:13,0:13:0.24:0,0,152	1/1:0,36:36:98.96:896,99,0	1/1:5,24:29:72.03:659,72,0	1/1:2,12:14:33.02:302,33,0	0/0:32,0:33:78.06:0,78,873	1/1:2,19:21:50.95:457,51,0	1/1:5,17:22:51.02:467,51,0	1/1:2,25:27:69.04:631,69,0	1/1:5,20:25:51.02:467,51,0	0/0:20,0:20:36.63:0,37,571	1/1:0,22:22:62.99:568,63,0	1/1:3,19:22:45.02:412,45,0	1/1:1,22:23:66.04:604,66,0	0/1:2,10:12:4.56:217,0,5	1/1:0,13:13:33.02:302,33,0	1/1:2,15:17:44.97:395,45,0	1/1:5,32:37:90.02:824,90,0	1/1:2,21:23:59.83:535,60,0	0/0:22,0:22:60.18:0,60,692	0/0:28,0:28:72.19:0,72,811	0/0:18,0:18:51.14:0,51,580	1/1:3,22:25:60.03:549,60,0	1/1:3,23:26:69.02:623,69,0	1/1:2,28:30:84.04:768,84,0	1/1:0,17:17:48.02:439,48,0
chr10	66711805	.	C	CT	3830	PASS	AB=0.770;AC=36;AF=0.643;AN=56;BaseQRankSum=-2.867;DP=585;FS=2.663;HRun=14;HaplotypeScore=85.3643;InbreedingCoeff=0.1709;MQ=67.30;MQ0=1;MQRankSum=0.231;QD=7.69;ReadPosRankSum=-2.175;VQSLOD=2.5316;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:34,2:39:43.32:43,0,284	0/0:8,0:9:11.64:0,12,71	0/0:19,0:13:14.30:0,14,91	0/1:8,0:6:14.24:14,0,33	0/0:9,0:22:24.58:0,25,94	1/1:3,19:23:35.70:286,36,0	0/1:14,6:21:9.27:180,0,9	1/1:21,14:36:30.28:324,30,0	1/1:6,14:20:24:211,24,0	1/1:10,14:24:3.02:240,3,0	1/1:5,10:17:7.21:147,7,0	1/1:0,14:16:17.33:129,17,0	0/0:17,2:19:0.13:0,0,127	0/1:9,7:16:6.24:64,0,6	0/1:9,14:23:7.39:172,0,7	0/1:11,12:23:7.34:176,0,7	0/1:8,18:27:2.70:216,0,3	1/1:2,5:7:3:26,3,0	1/1:12,15:28:31.62:348,32,0	1/1:10,9:20:17.84:146,18,0	0/1:19,2:25:4.08:242,0,4	0/0:12,1:17:22.69:0,23,203	0/1:16,4:21:18.56:19,0,137	0/1:19,5:24:49.29:49,0,227	1/1:1,17:18:18:158,18,0	1/1:7,7:16:3.32:125,3,0	1/1:6,15:22:27.27:219,27,0	1/1:4,15:23:25.90:294,26,0
chr10	66713013	.	TA	T	368.74	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.168;DP=479;FS=2.061;HRun=8;HaplotypeScore=47.1885;InbreedingCoeff=0.8887;MQ=75.06;MQ0=2;MQRankSum=-1.085;QD=18.44;ReadPosRankSum=1.138;VQSLOD=3.2948;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:39.12:0,39,471	0/0:8,0:8:21.06:0,21,254	0/0:15,0:13:27.04:0,27,290	0/0:12,0:11:18.05:0,18,207	1/1:3,17:20:48.07:464,48,0	0/0:29,0:29:87.27:0,87,1048	0/0:8,0:8:21.05:0,21,243	0/0:33,0:33:75.21:0,75,886	0/0:16,0:16:36.11:0,36,435	0/0:18,0:18:48.15:0,48,576	0/0:22,1:23:37.22:0,37,727	0/0:18,0:18:45.14:0,45,540	0/0:14,0:14:36.11:0,36,435	0/0:15,0:15:42.13:0,42,507	0/0:15,0:15:42.13:0,42,507	0/0:14,0:14:30.09:0,30,362	0/0:26,0:26:75.23:0,75,902	0/0:5,0:5:15.05:0,15,181	0/0:25,0:25:72.22:0,72,866	0/0:24,0:24:63.19:0,63,758	0/0:3,0:3:9.03:0,9,109	0/0:6,0:6:12.04:0,12,145	0/0:19,0:19:51.11:0,51,600	0/0:9,0:9:27.08:0,27,326	0/0:23,0:23:60.18:0,60,725	0/0:31,0:31:87.27:0,87,1051	0/0:27,0:27:78.21:0,78,918	0/0:9,0:9:27.08:0,27,326
chr10	66714530	.	AAG	A	1256.11	PASS	AB=1.000;AC=29;AF=0.604;AN=48;BaseQRankSum=2.391;DP=402;FS=9.377;HRun=0;HaplotypeScore=48.6892;InbreedingCoeff=0.4493;MQ=28.27;MQ0=61;MQRankSum=-3.830;QD=8.16;ReadPosRankSum=1.345;VQSLOD=1.8497;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:11,0:9:18.61:54,0,19	0/0:3,0:3:2.94:0,3,18	0/0:93,0:8:7.83:0,8,58	0/0:95,1:8:13:0,13,121	0/1:5,0:3:0:0,0,0	./.	1/1:2,0:1:2.84:14,3,0	0/0:21,0:14:17.75:0,18,118	1/1:8,0:4:2.61:57,3,0	0/1:6,0:6:3.43:88,0,3	1/1:5,1:6:11.17:77,11,0	1/1:17,1:14:15.90:167,16,0	0/1:8,0:8:12.71:13,0,57	1/1:13,0:8:12.81:112,13,0	1/1:4,0:4:7.92:52,8,0	0/1:5,0:5:4.20:15,0,4	1/1:20,0:17:27.01:152,27,0	1/1:17,1:12:13.84:178,14,0	1/1:4,0:3:2.98:21,3,0	./.	./.	0/0:8,0:7:5.80:0,6,93	0/0:3,0:2:5.69:0,6,53	0/0:11,0:8:6.02:0,6,77	1/1:8,2:9:12.76:154,13,0	1/1:3,2:5:12.02:130,12,0	1/1:11,0:11:18.78:131,19,0	./.
chr10	66714531	.	AG	A	1264.76	PASS	AB=0.984;AC=33;AF=0.688;AN=48;BaseQRankSum=3.507;DP=398;FS=10.590;HRun=1;HaplotypeScore=46.3106;InbreedingCoeff=0.3254;MQ=28.27;MQ0=60;MQRankSum=-2.174;QD=4.62;ReadPosRankSum=3.177;VQSLOD=-0.2417;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:9,1:9:18.32:60,0,18	0/0:3,0:3:2.94:0,3,18	0/0:94,1:8:7.41:0,7,39	0/1:95,2:8:3.73:4,0,72	0/1:4,0:2:0:0,0,0	./.	1/1:0,1:1:2.84:14,3,0	0/1:21,0:14:2.28:2,0,57	1/1:8,0:4:10.99:72,11,0	0/1:6,0:6:3.46:72,0,3	1/1:5,0:5:13.94:82,14,0	1/1:16,1:13:24.19:173,24,0	0/1:8,0:8:31.79:49,0,32	1/1:13,0:8:17.21:108,17,0	1/1:4,0:4:7.98:49,8,0	1/1:5,0:5:3.44:21,3,0	1/1:18,1:16:27.52:154,28,0	1/1:18,0:12:21.20:165,21,0	1/1:4,0:3:2.98:21,3,0	./.	./.	0/1:8,0:7:1.69:2,0,50	0/0:3,0:2:4.82:0,5,36	0/0:12,0:8:6:0,6,53	1/1:10,0:9:13.41:116,13,0	1/1:5,0:5:11.98:100,12,0	1/1:11,0:11:20.78:145,21,0	./.
chr10	66714559	.	AGG	A	746.26	PASS	AB=0.828;AC=16;AF=0.333;AN=48;BaseQRankSum=1.672;DP=358;FS=1.694;HRun=2;HaplotypeScore=50.0493;InbreedingCoeff=-0.0781;MQ=26.20;MQ0=42;MQRankSum=-3.616;QD=8.48;ReadPosRankSum=1.310;VQSLOD=0.7006;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:5,4:8:2.88:138,0,3	1/1:0,2:2:6:57,6,0	0/0:85,1:11:20.91:0,21,179	0/0:124,4:7:4.59:0,5,77	./.	./.	0/1:2,0:2:3.22:14,0,3	0/0:17,0:12:36.05:0,36,488	0/1:4,3:5:40.04:48,0,40	0/0:3,0:3:5.95:0,6,60	0/1:3,2:4:34.41:43,0,34	0/1:6,2:8:21.76:46,0,22	0/0:8,0:8:7.89:0,8,248	0/1:7,1:7:3.77:73,0,4	0/1:5,1:6:0.91:66,0,1	1/1:5,0:5:2.88:16,3,0	0/1:8,2:9:24.99:152,0,25	0/1:10,1:9:45.17:95,0,45	0/0:4,0:1:3.01:0,3,39	./.	0/1:2,0:2:0:0,0,0	0/0:1,0:1:3.01:0,3,45	0/0:5,0:4:12.04:0,12,186	0/0:7,0:6:6.02:0,6,78	0/1:5,2:7:35.10:52,0,35	0/0:2,0:2:3:0,3,28	0/1:4,2:6:39.51:80,0,40	./.
chr10	66714618	.	TA	T	4140.45	PASS	AB=0.856;AC=44;AF=0.786;AN=56;BaseQRankSum=-1.555;DP=323;FS=2.509;HRun=10;HaplotypeScore=44.9216;InbreedingCoeff=0.6378;MQ=80.97;MQ0=3;MQRankSum=-3.132;QD=15.17;ReadPosRankSum=3.575;VQSLOD=3.7470;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,18:20:32.97:286,33,0	1/1:0,2:2:6:52,6,0	0/1:24,1:16:9.15:9,0,105	0/0:24,0:14:16.68:0,17,166	1/1:1,9:10:23.99:208,24,0	1/1:0,7:7:18:156,18,0	1/1:2,10:12:19.69:202,20,0	1/1:4,17:21:47.96:414,48,0	1/1:1,4:5:5.99:52,6,0	1/1:3,8:11:23.98:208,24,0	1/1:0,10:10:26.99:234,27,0	0/1:6,3:8:21.15:66,0,21	0/0:11,0:11:30.06:0,30,316	1/1:3,7:10:17.98:156,18,0	1/1:2,6:8:8.98:78,9,0	1/1:3,5:8:8.97:78,9,0	1/1:3,13:17:16.28:271,16,0	1/1:1,13:14:32.99:286,33,0	1/1:4,17:21:17.76:377,18,0	1/1:2,9:11:11.94:104,12,0	1/1:0,7:7:18:156,18,0	0/0:3,0:3:6:0,6,58	0/0:2,0:2:5.98:0,6,54	0/0:6,2:7:15.03:0,15,157	1/1:2,12:14:23.94:201,24,0	1/1:5,8:13:1.76:183,2,0	1/1:1,5:6:11.99:101,12,0	1/1:0,12:12:29.99:260,30,0
chr10	66714875	.	C	CT	196.93	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=1.811;DP=459;FS=0.000;HRun=1;HaplotypeScore=47.2712;InbreedingCoeff=0.6596;MQ=73.38;MQ0=0;MQRankSum=-0.925;QD=32.82;ReadPosRankSum=-0.801;VQSLOD=2.9187;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:66.20:0,66,900	0/0:2,0:2:6.02:0,6,84	0/0:16,0:16:13.20:0,13,458	0/0:9,0:9:20.56:0,21,220	1/1:0,6:6:18.06:287,18,0	0/0:14,0:14:42.13:0,42,570	0/0:19,0:19:57.18:0,57,781	0/0:40,0:40:99:0,117,1602	0/0:18,0:17:48.16:0,48,670	0/0:23,0:23:66.22:0,66,912	0/0:21,0:21:63.19:0,63,856	0/0:17,0:17:45.15:0,45,627	0/0:11,0:11:33.11:0,33,462	0/0:10,0:10:30.10:0,30,419	0/0:17,0:16:48.16:0,48,669	0/0:20,0:20:57.19:0,57,796	0/0:27,0:27:81.27:0,81,1131	0/0:20,0:20:60.17:0,60,804	0/0:21,0:21:57.19:0,57,797	0/0:15,0:15:42.14:0,42,587	0/0:16,0:16:48.16:0,48,671	0/0:1,0:1:3.01:0,3,40	0/0:1,0:1:3.01:0,3,42	0/0:14,0:14:42.14:0,42,583	0/0:27,0:27:75.21:0,75,1048	0/0:16,0:16:45.15:0,45,629	0/0:19,0:19:57.19:0,57,794	0/0:15,0:15:45.15:0,45,629
chr10	66714894	.	CA	C	73.66	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.435;DP=480;FS=3.026;HRun=9;HaplotypeScore=53.3733;InbreedingCoeff=0.7607;MQ=67.07;MQ0=0;MQRankSum=-0.282;QD=6.70;ReadPosRankSum=-2.192;VQSLOD=0.5184;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:78.05:0,78,848	0/0:4,0:4:11.99:0,12,124	0/0:12,0:11:12.44:0,12,188	0/0:8,0:8:18.29:0,18,167	1/1:4,7:11:17.99:164,18,0	0/0:16,0:16:45.11:0,45,501	0/0:22,0:22:66.17:0,66,741	0/0:36,0:36:78.19:0,78,870	0/0:18,1:18:17.68:0,18,455	0/0:29,0:29:72.21:0,72,830	0/0:17,0:17:42.09:0,42,468	0/0:17,0:17:42.12:0,42,484	0/0:9,0:9:24.06:0,24,268	0/0:12,0:12:36.11:0,36,413	0/0:16,0:15:39.11:0,39,447	0/0:22,0:22:63.19:0,63,725	0/0:25,0:25:66.19:0,66,758	0/0:20,0:20:48.13:0,48,539	0/0:24,0:24:54.16:0,54,623	0/0:16,0:16:17.73:0,18,457	0/0:19,0:19:45.07:0,45,491	0/0:2,0:2:6.02:0,6,69	0/0:2,0:2:6.02:0,6,69	0/0:17,0:17:51.15:0,51,589	0/0:22,0:22:60.17:0,60,685	0/0:14,0:14:30.08:0,30,336	0/0:26,0:26:60.15:0,60,672	0/0:15,0:15:42.08:0,42,460
chr10	66715429	.	G	GCA	14926.29	PASS	AB=0.674;AC=36;AF=0.643;AN=56;BaseQRankSum=-13.121;DP=650;FS=7.154;HRun=0;HaplotypeScore=76.7105;InbreedingCoeff=0.6728;MQ=62.66;MQ0=1;MQRankSum=-0.310;QD=30.52;ReadPosRankSum=5.232;VQSLOD=6.5332;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:56:99:0,135,1633	0/0:5,0:5:15.02:0,15,173	0/1:14,0:13:2.53:3,0,79	0/0:6,0:6:5.95:0,6,44	1/1:2,16:18:39.13:651,39,0	1/1:11,12:23:48.12:725,48,0	0/1:4,18:22:7.96:421,0,8	0/0:19,0:19:41.96:0,42,441	1/1:1,19:20:36.12:601,36,0	1/1:2,36:38:99:1619,105,0	1/1:1,20:22:42.14:701,42,0	1/1:5,25:32:31.54:1060,32,0	0/0:16,0:16:42.02:0,42,469	1/1:4,21:25:7.09:663,7,0	1/1:2,19:22:36.12:601,36,0	1/1:1,20:22:48.16:801,48,0	1/1:7,27:34:6.19:1114,6,0	0/1:4,19:23:15.84:592,0,16	0/1:6,11:18:48.96:510,0,49	1/1:5,9:14:18.06:301,18,0	1/1:9,34:43:75.26:1253,75,0	0/0:11,0:12:35.84:0,36,395	0/0:6,0:6:12.04:0,12,151	0/0:40,0:40:99:0,108,1338	1/1:0,27:27:63.22:1053,63,0	1/1:3,28:31:78.24:1242,78,0	1/1:4,20:25:10.58:713,11,0	1/1:4,11:14:18.06:301,18,0
chr10	66716985	.	G	GAATAAATAAATAAATA	739.84	PASS	AC=2;AF=0.037;AN=54;BaseQRankSum=3.375;DP=426;FS=5.848;HRun=0;HaplotypeScore=148.7299;InbreedingCoeff=0.7025;MQ=53.06;MQ0=20;MQRankSum=-3.316;QD=49.32;ReadPosRankSum=-3.810;VQSLOD=2.3725;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:24.55:0,25,990	0/0:7,0:7:21.07:0,21,761	./.	0/0:7,0:1:3.01:0,3,32	1/1:9,5:15:21.03:832,21,0	0/0:19,0:19:48.13:0,48,1731	0/0:12,0:11:24.05:0,24,675	0/0:31,0:26:60.13:0,60,1644	0/0:16,0:15:39:0,39,1092	0/0:16,0:14:33.10:0,33,1104	0/0:16,0:16:34.35:0,34,1215	0/0:16,0:16:33.06:0,33,1179	0/0:17,0:17:39.12:0,39,1247	0/0:7,0:7:17.99:0,18,735	0/0:8,0:8:15.05:0,15,671	0/0:12,0:12:24.07:0,24,907	0/0:20,0:18:41.98:0,42,1190	0/0:20,0:17:42.05:0,42,1388	0/0:22,0:19:42.11:0,42,1346	0/0:18,0:18:45.11:0,45,1645	0/0:7,0:4:12.01:0,12,280	0/0:4,0:4:6.02:0,6,268	0/0:11,0:11:29.10:0,29,933	0/0:12,0:12:33.08:0,33,1115	0/0:23,0:23:60.21:0,60,2520	0/0:22,0:22:48.11:0,48,1785	0/0:33,0:32:72.20:0,72,2434	0/0:5,0:3:9.01:0,9,292
chr10	66717270	.	T	TA	22631.67	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-16.448;DP=745;FS=18.012;HRun=1;HaplotypeScore=64.9280;InbreedingCoeff=0.9974;MQ=90.05;MQ0=0;MQRankSum=-5.283;QD=44.55;ReadPosRankSum=5.795;VQSLOD=2.6737;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,162,2221	0/0:5,0:5:15.05:0,15,210	0/0:30,0:30:84.27:0,84,1142	0/0:27,0:27:64.06:0,64,941	1/1:0,26:26:75.26:1196,75,0	1/1:1,29:30:72.25:1151,72,0	1/1:0,14:14:39.13:624,39,0	0/0:34,0:34:99:0,102,1409	1/1:1,27:28:78.27:1247,78,0	1/1:0,28:28:84.29:1343,84,0	1/1:1,20:21:54.18:863,54,0	1/1:0,39:39:99:1725,108,0	0/0:25,0:25:75.24:0,75,1032	1/1:3,28:31:84.29:1333,84,0	1/1:1,38:39:99:1727,108,0	1/1:2,27:29:78.26:1234,78,0	1/1:0,18:18:54.18:863,54,0	1/1:0,22:22:66.23:1055,66,0	1/1:1,23:24:72.23:1127,72,0	1/1:0,20:20:60.20:959,60,0	1/1:0,39:39:99:1727,108,0	0/0:18,0:18:54.18:0,54,754	0/0:20,0:20:60.19:0,60,822	0/0:23,0:23:69.23:0,69,963	1/1:0,25:25:66.23:1055,66,0	1/1:0,29:29:87.30:1391,87,0	1/1:0,32:32:96.33:1533,96,0	1/1:2,12:14:30.10:480,30,0
chr10	66720579	.	A	AC	3227.04	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=9.649;DP=270;FS=5.640;HRun=4;HaplotypeScore=49.1037;InbreedingCoeff=0.8848;MQ=91.55;MQ0=1;MQRankSum=-4.898;QD=25.21;ReadPosRankSum=3.416;VQSLOD=2.2884;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:58.55:0,59,885	0/0:5,0:5:15.05:0,15,210	0/0:18,0:15:42.01:0,42,507	0/0:26,0:24:30.59:0,31,485	1/1:1,10:11:33.05:391,33,0	1/1:0,4:4:9.03:106,9,0	1/1:0,10:10:27.04:304,27,0	0/0:18,0:18:51.17:0,51,708	1/1:0,4:4:12.02:127,12,0	1/1:0,3:3:9.03:115,9,0	1/1:3,6:9:17.97:180,18,0	1/1:0,10:10:17.82:214,18,0	0/0:9,0:9:21.07:0,21,292	1/1:0,6:6:15.04:180,15,0	1/1:0,5:5:12.04:144,12,0	1/1:0,8:8:21.06:245,21,0	1/1:0,3:3:6.01:63,6,0	1/1:0,1:1:3.01:36,3,0	1/1:0,4:4:12.04:156,12,0	1/1:3,15:18:34.20:361,34,0	1/1:1,7:8:7.99:118,8,0	0/0:11,0:11:33.09:0,33,442	0/0:21,0:21:60.20:0,60,826	0/0:11,0:11:30.08:0,30,400	1/1:1,3:4:6.02:81,6,0	1/1:0,7:8:23.52:241,24,0	1/1:0,7:7:18.53:225,19,0	1/1:0,5:5:12.04:154,12,0
chr10	66720780	.	TG	T	7134.07	PASS	AB=0.952;AC=39;AF=0.696;AN=56;BaseQRankSum=7.058;DP=522;FS=19.600;HRun=10;HaplotypeScore=54.7821;InbreedingCoeff=0.9014;MQ=81.34;MQ0=0;MQRankSum=-2.374;QD=19.82;ReadPosRankSum=3.421;VQSLOD=3.7686;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:54.15:0,54,597	0/0:8,0:8:21.06:0,21,232	0/0:18,0:18:7.60:0,8,265	0/1:19,1:18:3.99:4,0,167	1/1:3,17:20:47.98:417,48,0	1/1:2,27:29:71.98:625,72,0	1/1:1,13:14:32.99:286,33,0	0/0:32,1:35:48.98:0,49,635	1/1:1,17:19:47.02:397,47,0	1/1:4,18:22:56.98:492,57,0	1/1:2,12:14:35.95:305,36,0	1/1:3,13:16:35.98:312,36,0	0/0:24,0:24:57.12:0,57,608	1/1:1,24:25:68.99:599,69,0	1/1:1,19:20:53.99:469,54,0	1/1:3,21:24:59.98:521,60,0	1/1:2,11:13:32.99:286,33,0	1/1:2,8:10:17.99:156,18,0	1/1:2,14:17:40.96:333,41,0	1/1:3,12:15:29.90:248,30,0	1/1:3,21:24:59.98:521,60,0	0/0:17,1:18:16.06:0,16,405	0/0:24,0:24:51.10:0,51,545	0/0:12,0:12:30.04:0,30,318	1/1:2,12:14:5.80:279,6,0	1/1:3,10:13:29.98:259,30,0	1/1:5,21:26:59.97:521,60,0	1/1:1,4:5:12:104,12,0
chr10	66721335	.	A	AG	19460.07	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=17.860;DP=751;FS=2.349;HRun=1;HaplotypeScore=103.7728;InbreedingCoeff=0.9998;MQ=79.35;MQ0=0;MQRankSum=-4.558;QD=39.71;ReadPosRankSum=3.412;VQSLOD=5.0792;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:90.29:0,90,1168	0/0:17,0:17:51.15:0,51,647	0/0:21,0:21:44.64:0,45,691	0/0:18,0:18:48.13:0,48,586	0/0:25,0:25:75.17:0,75,926	1/1:0,26:26:66.22:957,66,0	1/1:0,21:21:57.19:823,57,0	0/0:37,0:37:99:0,102,1265	1/1:0,27:27:72.24:1043,72,0	1/1:1,49:50:99:2077,147,0	1/1:0,25:25:69.23:998,69,0	1/1:0,29:29:81.27:1169,81,0	0/0:28,0:28:84.23:0,84,1038	1/1:1,22:23:66.22:956,66,0	1/1:2,30:32:81.27:1171,81,0	1/1:0,20:20:57.19:824,57,0	1/1:1,14:15:45.15:646,45,0	1/1:1,10:11:30.10:434,30,0	1/1:4,22:26:58.14:898,58,0	1/1:1,33:34:93.23:1297,93,0	1/1:0,38:38:99:1566,108,0	0/0:29,0:29:87.26:0,87,1103	0/0:30,1:31:46.48:0,46,1032	0/0:25,0:25:72.23:0,72,934	1/1:3,26:29:81.26:1151,81,0	1/1:0,27:27:81.25:1148,81,0	1/1:1,47:47:99:1912,135,0	1/1:0,9:9:27.09:391,27,0
chr10	66722002	.	CACAAACAAACAA	C	10085.68	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=4.582;DP=432;FS=4.507;HRun=0;HaplotypeScore=138.5934;InbreedingCoeff=0.8481;MQ=62.87;MQ0=3;MQRankSum=-6.561;QD=37.49;ReadPosRankSum=4.128;VQSLOD=4.4157;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:27:42.14:0,42,1052	0/0:1,0:5:12.04:0,12,308	0/0:27,0:19:27.09:0,27,927	0/0:21,0:16:15.05:0,15,474	1/1:10,11:21:24:579,24,0	1/1:7,12:19:21.07:733,21,0	1/1:5,6:11:5.23:208,5,0	0/0:20,0:28:39.10:0,39,837	1/1:3,6:9:9.03:314,9,0	1/1:4,10:14:30.09:933,30,0	1/1:3,16:19:39.09:1127,39,0	1/1:1,6:7:12.04:419,12,0	0/0:12,0:12:30.10:0,30,1701	1/1:6,0:6:3.01:66,3,0	1/1:3,10:13:15.05:523,15,0	1/1:5,9:14:12.04:351,12,0	1/1:6,7:12:2.97:20,3,0	1/1:2,8:10:9.03:314,9,0	1/1:10,7:17:21.07:570,21,0	1/1:5,13:18:39.13:1261,39,0	1/1:5,0:5:2.17:127,2,0	0/0:12,0:12:21.07:0,21,1003	0/0:14,0:14:24.07:0,24,1255	0/0:16,0:16:36.10:0,36,1865	1/1:4,11:15:9.03:314,9,0	1/1:6,11:17:33.08:867,33,0	1/1:10,12:22:12.04:419,12,0	1/1:7,12:19:27.09:942,27,0
chr10	66722123	.	TC	T	613.43	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.892;DP=371;FS=3.405;HRun=1;HaplotypeScore=40.9627;InbreedingCoeff=0.6015;MQ=67.51;MQ0=3;MQRankSum=1.473;QD=34.08;ReadPosRankSum=1.935;VQSLOD=3.2838;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:51.17:0,51,709	0/0:5,0:5:14.98:0,15,185	0/0:18,0:11:24.49:0,24,249	0/0:11,0:5:8.81:0,9,65	1/1:0,18:18:51.17:708,51,0	0/0:26,0:26:78.11:0,78,1034	0/0:2,0:2:3.01:0,3,41	0/0:33,0:29:84.20:0,84,1078	0/0:5,0:5:15.05:0,15,209	0/0:18,0:18:51.01:0,51,644	0/0:14,0:14:36.11:0,36,485	0/0:6,0:6:18.05:0,18,234	0/0:9,0:8:24.08:0,24,334	0/0:7,0:7:21.06:0,21,273	0/0:13,0:12:36.08:0,36,451	0/0:11,0:11:33.11:0,33,460	0/0:30,0:29:75.19:0,75,1002	0/0:24,0:24:66:0,66,827	0/0:15,0:15:45.12:0,45,568	0/0:7,0:7:21.06:0,21,273	0/0:5,0:5:12.04:0,12,167	0/0:1,0:1:3.01:0,3,42	0/0:11,0:11:33.11:0,33,461	0/0:2,0:2:6.01:0,6,66	0/0:9,0:9:11.97:0,12,242	0/0:20,0:20:60.19:0,60,824	0/0:13,0:13:36.12:0,36,490	0/0:19,0:17:50.98:0,51,561
chr10	66722820	.	CTCAT	C	15844.84	PASS	AC=34;AF=0.630;AN=54;BaseQRankSum=11.133;DP=545;FS=15.618;HRun=0;HaplotypeScore=105.1520;InbreedingCoeff=0.9990;MQ=81.51;MQ0=3;MQRankSum=-6.909;QD=46.19;ReadPosRankSum=6.751;VQSLOD=4.1539;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:54.19:0,54,1451	0/0:9,0:9:27.09:0,27,717	0/0:25,0:25:72.18:0,72,1776	0/0:19,0:19:44.45:0,44,1231	0/0:28,0:28:63.22:0,63,1723	1/1:2,25:27:63.22:1192,63,0	1/1:1,10:11:27.09:523,27,0	0/0:40,0:40:99:0,111,2929	1/1:0,20:20:45.15:872,45,0	1/1:1,30:31:90.30:1652,90,0	1/1:2,17:17:36.12:698,36,0	1/1:2,23:25:63.22:1209,63,0	0/0:25,0:25:75.22:0,75,1938	1/1:0,15:14:36.12:692,36,0	1/1:1,25:26:48.16:905,48,0	1/1:0,16:16:42.14:796,42,0	1/1:0,13:13:27.09:517,27,0	1/1:0,16:16:39.13:751,39,0	1/1:1,11:12:33.09:595,33,0	1/1:1,22:22:63.22:1209,63,0	1/1:1,14:14:30.02:576,30,0	0/0:16,0:16:39.13:0,39,1068	0/0:11,0:11:24.08:0,24,617	0/0:10,0:10:30.10:0,30,822	1/1:0,17:17:39.13:750,39,0	1/1:0,19:19:57.20:1105,57,0	1/1:0,38:38:96.29:1803,96,0	./.
chr10	66724983	.	G	GT	2105	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-12.035;DP=658;FS=2.481;HRun=3;HaplotypeScore=59.7119;InbreedingCoeff=0.9996;MQ=85.31;MQ0=0;MQRankSum=-5.972;QD=36.93;ReadPosRankSum=0.131;VQSLOD=4.0462;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,45:45:99:1764,126,0	1/1:0,12:12:33.11:462,33,0	0/0:21,0:21:52.86:0,53,588	0/0:20,0:20:37.34:0,37,424	0/0:34,0:34:93.26:0,93,1103	0/0:34,0:34:99:0,99,1175	0/0:23,0:23:66.20:0,66,792	0/0:22,0:22:57.17:0,57,684	0/0:22,0:22:60.17:0,60,708	0/0:24,0:24:69.21:0,69,828	0/0:14,0:14:33.10:0,33,396	0/0:25,0:25:69.21:0,69,828	0/0:20,0:20:57.15:0,57,669	0/0:21,0:21:60.18:0,60,720	0/0:29,0:29:87.27:0,87,1044	0/0:25,0:25:69.21:0,69,828	0/0:21,0:21:54.16:0,54,647	0/0:13,0:13:39.09:0,39,454	0/0:23,0:23:57.17:0,57,683	0/0:25,0:25:72.22:0,72,864	0/0:33,0:33:93.27:0,93,1104	0/0:20,0:20:60.18:0,60,720	0/0:22,0:22:60.18:0,60,718	0/0:19,0:19:45.14:0,45,540	0/0:24,0:23:69.20:0,69,815	0/0:28,0:28:81.25:0,81,972	0/0:24,0:24:69.19:0,69,816	0/0:15,0:15:45.07:0,45,498
chr10	66726439	.	A	ATGCATGCG	19454.32	PASS	AB=0.968;AC=37;AF=0.661;AN=56;BaseQRankSum=-11.929;DP=763;FS=2.297;HRun=0;HaplotypeScore=180.0867;InbreedingCoeff=0.7711;MQ=54.66;MQ0=0;MQRankSum=-11.216;QD=34.19;ReadPosRankSum=4.726;VQSLOD=4.6152;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,114,2452	0/0:14,0:14:39.13:0,39,999	0/0:8,0:6:3.46:0,3,25	0/0:9,0:5:4.02:0,4,26	0/1:29,0:30:99:103,0,103	1/1:5,16:24:12.04:418,12,0	1/1:1,33:40:9.03:387,9,0	0/0:33,0:33:81.16:0,81,1310	1/1:4,23:29:36.12:1539,36,0	1/1:0,28:29:77.89:2574,78,0	1/1:2,26:28:5.75:257,6,0	1/1:2,39:44:48.16:2053,48,0	0/0:25,0:25:69.18:0,69,1575	1/1:4,32:39:39.09:1553,39,0	1/1:4,33:42:39.04:1665,39,0	1/1:7,30:37:45.15:1858,45,0	1/1:4,15:19:15.05:645,15,0	1/1:2,12:14:3.01:129,3,0	1/1:8,17:27:57.98:854,58,0	1/1:3,30:37:6.01:258,6,0	1/1:5,17:26:2.80:13,3,0	0/0:13,0:13:36.07:0,36,737	0/0:28,0:28:72.20:0,72,1670	0/0:20,0:20:60.18:0,60,1400	1/1:3,37:42:39.13:1677,39,0	1/1:3,21:26:68.03:1465,68,0	1/1:2,28:30:39.13:1568,39,0	1/1:0,5:5:12.04:438,12,0
chr10	66726443	.	A	ATGCG	8587.60	PASS	AB=0.995;AC=30;AF=0.536;AN=56;BaseQRankSum=13.274;DP=765;FS=5.536;HRun=0;HaplotypeScore=183.8969;InbreedingCoeff=0.3471;MQ=55.29;MQ0=0;MQRankSum=-13.705;QD=15.15;ReadPosRankSum=4.170;VQSLOD=4.1805;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,117,1854	0/0:13,0:13:39.13:0,39,723	0/0:9,0:6:5.03:0,5,30	0/0:11,0:7:3.70:0,4,40	0/1:30,0:30:99:390,0,123	0/1:23,1:23:49.88:229,0,50	1/1:40,0:40:11.07:171,11,0	0/0:35,0:35:96.14:0,96,1223	1/1:30,0:30:1.30:614,1,0	1/1:31,0:31:30.74:1051,31,0	0/1:28,0:28:7.15:117,0,7	1/1:42,0:42:60.39:895,60,0	0/0:26,0:26:69.18:0,69,1153	1/1:37,2:39:23.26:724,23,0	1/1:39,0:39:49.28:735,49,0	1/1:35,0:35:2.11:734,2,0	1/1:18,0:18:14.08:226,14,0	0/1:13,0:13:40.96:46,0,41	1/1:25,0:25:22.91:411,23,0	0/1:40,0:40:66.73:115,0,67	0/1:26,0:26:4.27:4,0,41	0/0:14,0:14:36.07:0,36,546	0/0:27,0:27:72.20:0,72,1252	0/0:20,0:20:60.18:0,60,1008	0/1:44,0:44:37.59:689,0,38	0/1:29,0:29:71.49:550,0,71	1/1:28,1:29:20.18:714,20,0	1/1:5,0:5:10.85:171,11,0
chr10	66727265	.	AAGCTCCAC	A	834.93	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.971;DP=731;FS=4.066;HRun=0;HaplotypeScore=182.1987;InbreedingCoeff=0.9913;MQ=92.28;MQ0=0;MQRankSum=-5.223;QD=41.75;ReadPosRankSum=-0.564;VQSLOD=3.0619;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,102,4281	0/0:6,0:6:18.06:0,18,761	0/0:32,0:32:96.22:0,96,3600	0/0:29,0:29:76.90:0,77,2869	1/1:2,17:20:36.12:930,36,0	0/0:23,0:23:63.22:0,63,2718	0/0:19,0:19:54.16:0,54,2087	0/0:41,0:41:99:0,117,4625	0/0:23,0:23:66.21:0,66,2817	0/0:31,0:31:90.25:0,90,3669	0/0:19,0:19:54.17:0,54,2283	0/0:25,0:25:75.26:0,75,3094	0/0:36,0:36:99:0,108,4582	0/0:14,0:14:42.14:0,42,1781	0/0:33,0:33:99:0,99,4190	0/0:35,0:35:99:0,105,4365	0/0:32,0:32:90.28:0,90,3582	0/0:13,0:13:36.12:0,36,1428	0/0:21,0:21:63.21:0,63,2608	0/0:29,0:29:87.30:0,87,3675	0/0:47,0:47:99:0,138,6125	0/0:21,0:21:63.20:0,63,2577	0/0:27,0:27:72.23:0,72,2754	0/0:20,0:20:60.21:0,60,2588	0/0:24,0:24:72.25:0,72,3051	0/0:28,0:28:84.29:0,84,3637	0/0:37,0:37:99:0,108,4439	0/0:10,0:10:30.10:0,30,998
chr10	66729328	.	G	GA	3465.02	PASS	AB=0.661;AC=28;AF=0.500;AN=56;BaseQRankSum=-7.808;DP=560;FS=4.714;HRun=13;HaplotypeScore=70.1825;InbreedingCoeff=0.3198;MQ=58.23;MQ0=17;MQRankSum=0.138;QD=10.28;ReadPosRankSum=0.033;VQSLOD=3.1085;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:35:63.32:0,63,419	0/0:5,0:5:2.91:0,3,20	0/0:18,0:3:2.90:0,3,20	0/0:22,0:3:1.99:0,2,6	0/0:30,0:30:49.22:0,49,334	0/1:9,10:19:28.70:190,0,29	1/1:9,11:21:1.68:282,2,0	0/0:32,2:36:14.75:0,15,352	0/1:6,6:12:8.57:72,0,9	0/1:15,8:24:20.26:160,0,20	0/1:8,15:23:14.13:168,0,14	1/1:2,10:14:23.14:236,23,0	0/0:17,0:17:25.71:0,26,167	1/1:3,8:11:14.98:132,15,0	1/1:6,12:18:30.03:279,30,0	0/1:5,8:13:2.72:108,0,3	1/1:10,18:29:37.10:390,37,0	0/1:7,12:19:8.98:202,0,9	1/1:11,11:25:18.52:252,19,0	1/1:10,16:26:30.21:241,30,0	0/1:6,8:14:26.83:91,0,27	0/0:16,0:15:26.73:0,27,183	0/0:16,0:19:18.83:0,19,114	0/0:18,0:21:47.73:0,48,305	1/1:5,13:18:6.45:202,6,0	1/1:7,6:12:0.41:136,0,0	1/1:9,16:28:11.28:250,11,0	0/1:3,1:6:9.69:73,0,10
chr10	66729516	.	AT	A	447.69	PASS	AB=0.840;AC=4;AF=0.071;AN=56;BaseQRankSum=6.777;DP=598;FS=0.000;HRun=11;HaplotypeScore=60.8166;InbreedingCoeff=0.3853;MQ=65.89;MQ0=0;MQRankSum=-0.247;QD=8.29;ReadPosRankSum=1.904;VQSLOD=1.9786;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,3:29:0.99:0,1,610	0/0:12,0:12:33.08:0,33,352	0/0:10,0:9:11.74:0,12,93	0/0:8,1:8:10.53:0,11,86	1/1:6,20:28:68.18:527,68,0	0/0:20,0:20:51.13:0,51,544	0/1:11,3:15:10.36:10,0,295	0/0:37,0:37:63.16:0,63,672	0/0:27,0:27:78.19:0,78,825	0/0:25,1:26:29.48:0,29,513	0/0:21,0:21:45.10:0,45,472	0/0:22,0:22:60.15:0,60,640	0/0:24,0:24:45.09:0,45,466	0/0:20,1:21:32.48:0,32,543	0/0:25,0:28:72.01:0,72,750	0/0:22,0:22:51.13:0,51,544	0/0:19,0:19:35.95:0,36,377	0/0:15,0:15:33.08:0,33,351	0/0:20,1:21:11.13:0,11,281	0/0:28,0:28:75.19:0,75,800	0/0:20,0:20:48.47:0,48,480	0/0:22,0:22:57.12:0,57,593	0/0:24,0:25:60.46:0,60,623	0/0:15,1:16:17.46:0,17,390	0/0:11,1:14:33.79:0,34,324	0/0:13,0:12:36.09:0,36,383	0/0:40,1:41:80.37:0,80,1024	0/1:8,2:11:22.39:22,0,162
chr10	66730390	.	T	TA	3977.09	PASS	AB=0.875;AC=34;AF=0.607;AN=56;BaseQRankSum=4.387;DP=329;FS=0.000;HRun=11;HaplotypeScore=46.2789;InbreedingCoeff=0.7778;MQ=77.19;MQ0=1;MQRankSum=-0.932;QD=18.94;ReadPosRankSum=1.581;VQSLOD=4.4236;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:35.67:0,36,268	0/0:5,0:5:14.94:0,15,116	0/0:31,0:16:13.92:0,14,53	0/1:15,0:12:1.70:2,0,20	0/0:3,0:12:18.33:0,18,53	1/1:0,12:12:30.06:305,30,0	1/1:2,5:7:17.87:166,18,0	0/0:32,0:32:63.56:0,64,474	1/1:0,5:5:15.03:152,15,0	1/1:1,12:13:33.04:321,33,0	1/1:2,6:8:18.04:182,18,0	1/1:4,3:7:9.02:91,9,0	0/0:10,0:10:23.90:0,24,186	1/1:2,4:6:9.02:91,9,0	0/1:4,2:6:17.22:24,0,17	1/1:2,3:5:6.01:61,6,0	1/1:5,14:21:30.53:455,31,0	1/1:4,3:7:9.02:91,9,0	1/1:0,12:11:36.04:346,36,0	1/1:0,12:13:36.07:365,36,0	0/0:2,0:2:5.98:0,6,46	0/0:1,0:1:2.99:0,3,23	0/0:6,0:6:8.96:0,9,70	0/0:5,0:5:11.95:0,12,93	1/1:3,17:23:21.36:355,21,0	1/1:5,12:17:36.04:345,36,0	1/1:0,16:16:36.07:365,36,0	1/1:8,8:17:26.89:258,27,0
chr10	66733476	.	AC	A	1369.19	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.471;DP=688;FS=1.248;HRun=3;HaplotypeScore=66.5976;InbreedingCoeff=0.9996;MQ=67.01;MQ0=0;MQRankSum=-1.324;QD=31.84;ReadPosRankSum=-5.539;VQSLOD=1.2701;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,154,2194	0/0:13,0:13:39.12:0,39,539	0/0:29,0:29:75.72:0,76,1071	0/0:33,0:30:75.25:0,75,1063	0/0:24,0:24:69.23:0,69,992	0/0:21,0:21:63.19:0,63,885	0/0:20,0:20:57.18:0,57,804	1/1:2,41:43:99:1464,123,0	0/0:23,0:23:66.22:0,66,950	0/0:21,0:21:60.18:0,60,827	0/0:21,0:21:63.21:0,63,906	0/0:25,0:25:75.25:0,75,1072	0/0:14,0:14:41.99:0,42,555	0/0:21,0:21:63.20:0,63,882	0/0:27,0:27:81.24:0,81,1127	0/0:20,0:20:60.20:0,60,864	0/0:40,0:40:99:0,114,1619	0/0:24,0:24:68.16:0,68,907	0/0:26,0:26:67.20:0,67,1009	0/0:31,0:31:90.28:0,90,1247	0/0:38,0:37:99:0,114,1599	0/0:19,0:19:57.18:0,57,795	0/0:21,0:21:63.21:0,63,906	0/0:16,0:16:48.15:0,48,672	0/0:22,0:22:66.21:0,66,933	0/0:17,0:17:51.17:0,51,733	0/0:17,0:16:51.17:0,51,733	0/0:11,0:11:33.11:0,33,475
chr10	66736158	.	T	TGCACGCAC	22485.25	PASS	AB=0.762;AC=43;AF=0.768;AN=56;BaseQRankSum=-8.471;DP=730;FS=1.406;HRun=0;HaplotypeScore=163.1973;InbreedingCoeff=0.8767;MQ=65.08;MQ0=0;MQRankSum=-11.681;QD=40.44;ReadPosRankSum=1.956;VQSLOD=4.7975;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:26,19:49:21.07:823,21,0	1/1:3,8:11:18.06:693,18,0	0/0:33,0:31:33.09:0,33,654	0/0:25,0:24:28.59:0,29,548	1/1:2,0:21:41.95:347,42,0	1/1:12,5:19:17.82:746,18,0	1/1:19,13:34:19.11:857,19,0	1/1:27,0:27:21.07:368,21,0	1/1:11,15:26:36.12:1425,36,0	1/1:13,14:27:45.14:1356,45,0	1/1:7,4:11:12.04:442,12,0	1/1:16,16:32:45.15:1636,45,0	0/0:28,0:28:57.18:0,57,1388	1/1:12,15:28:33.11:1316,33,0	1/1:16,24:40:39.13:1622,39,0	1/1:14,12:27:30.10:1174,30,0	1/1:11,12:24:24.08:950,24,0	0/1:11,5:16:56.59:731,0,57	1/1:15,10:24:39.09:1026,39,0	1/1:6,13:19:30.10:1248,30,0	1/1:28,0:28:21.05:370,21,0	0/0:29,0:29:81.25:0,81,1929	0/0:24,0:24:42.12:0,42,927	0/0:35,0:35:75.21:0,75,1865	1/1:9,20:30:51.17:2123,51,0	1/1:14,13:27:39.13:1472,39,0	1/1:7,17:24:36.12:1384,36,0	1/1:5,5:10:9.03:376,9,0
chr10	66736619	.	C	CACATGGCA	1273.40	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.549;DP=600;FS=1.239;HRun=0;HaplotypeScore=153.6904;InbreedingCoeff=0.9945;MQ=96.26;MQ0=0;MQRankSum=-4.600;QD=79.59;ReadPosRankSum=0.153;VQSLOD=3.9882;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:35:99:0,105,3007	0/0:11,0:11:33.11:0,33,979	0/0:31,0:31:93.30:0,93,2567	0/0:28,0:28:74.28:0,74,1881	1/1:0,16:16:29.78:1368,30,0	0/0:31,0:31:93.31:0,93,2734	0/0:11,0:11:33.09:0,33,869	0/0:39,0:39:99:0,111,3205	0/0:14,0:14:42.11:0,42,1130	0/0:25,0:25:72.24:0,72,2094	0/0:28,0:28:81.28:0,81,2371	0/0:21,0:21:63.22:0,63,1860	0/0:12,0:12:33.11:0,33,1000	0/0:14,0:14:42.14:0,42,1259	0/0:21,0:21:63.22:0,63,1881	0/0:28,0:28:84.27:0,84,2435	0/0:18,0:18:54.19:0,54,1551	0/0:7,0:7:21.06:0,21,569	0/0:17,0:17:48.15:0,48,1240	0/0:23,0:23:66.22:0,66,1925	0/0:23,0:23:69.24:0,69,2037	0/0:19,0:19:57.15:0,57,1519	0/0:24,0:24:69.24:0,69,1995	0/0:20,0:20:60.16:0,60,1687	0/0:20,0:20:60.18:0,60,1686	0/0:30,0:30:90.30:0,90,2617	0/0:20,0:20:60.20:0,60,1698	0/0:13,0:13:39.07:0,39,875
chr10	66736623	.	G	GA	262.92	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.400;DP=600;FS=0.000;HRun=1;HaplotypeScore=68.1039;InbreedingCoeff=0.7776;MQ=96.28;MQ0=0;MQRankSum=-5.304;QD=15.47;ReadPosRankSum=0.639;VQSLOD=3.3316;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:33:93.30:0,93,1206	0/0:11,0:11:33.11:0,33,428	0/0:32,0:32:84.26:0,84,1069	0/0:27,0:27:78.05:0,78,916	1/1:1,16:17:2.80:340,3,0	0/0:32,0:32:96.31:0,96,1246	0/0:12,0:12:36.12:0,36,467	0/0:43,0:43:99:0,117,1507	0/0:13,0:13:39.11:0,39,492	0/0:26,0:26:75.24:0,75,974	0/0:27,0:27:78.25:0,78,1012	0/0:21,0:21:60.19:0,60,775	0/0:13,0:13:39.13:0,39,506	0/0:14,0:14:42.14:0,42,545	0/0:20,0:20:60.20:0,60,779	0/0:27,0:27:81.25:0,81,1038	0/0:16,0:16:48.16:0,48,623	0/0:6,0:6:18.06:0,18,234	0/0:15,0:15:42.13:0,42,533	0/0:21,0:21:60.19:0,60,779	0/0:26,0:26:75.23:0,75,958	0/0:20,0:20:54.18:0,54,701	0/0:25,0:25:75.23:0,75,960	0/0:20,0:20:54.16:0,54,686	0/0:19,0:19:57.17:0,57,727	0/0:28,0:28:84.27:0,84,1091	0/0:22,0:22:63.20:0,63,818	0/0:13,0:13:39.13:0,39,506
chr10	66738024	.	GTGTGTGTGTGTA	G	3744.17	PASS	AB=1.000;AC=28;AF=0.519;AN=54;BaseQRankSum=11.196;DP=384;FS=10.228;HRun=0;HaplotypeScore=185.5191;InbreedingCoeff=0.4115;MQ=51.06;MQ0=8;MQRankSum=-10.043;QD=19.30;ReadPosRankSum=8.496;VQSLOD=0.4693;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,111,3490	0/0:6,0:6:15.05:0,15,586	0/0:11,0:8:21.52:0,22,328	0/0:15,0:11:29.19:0,29,475	1/1:24,5:29:5.97:48,6,0	1/1:10,0:10:6.02:134,6,0	1/1:14,0:14:6.02:134,6,0	0/0:30,0:28:71:0,71,1249	1/1:11,0:11:12.04:276,12,0	1/1:19,0:19:27.09:587,27,0	0/1:9,0:9:18.98:61,0,19	0/1:9,0:9:22.90:450,0,23	0/0:20,0:18:42.60:0,43,1767	1/1:12,0:11:9.03:202,9,0	0/1:3,0:3:15.97:127,0,16	1/1:7,0:7:15.05:335,15,0	1/1:15,0:15:0.08:305,0,0	1/1:1,0:1:3.01:64,3,0	0/1:14,0:13:85.15:116,0,85	1/1:6,0:6:6.02:141,6,0	0/0:8,0:5:9:0,9,97	0/0:17,0:17:42.06:0,42,1566	0/0:10,0:10:21.07:0,21,704	0/0:25,0:25:63.22:0,63,3177	1/1:18,0:18:15.05:335,15,0	0/1:13,0:13:57.91:306,0,58	0/1:4,0:4:13.97:124,0,14	./.
chr10	66738907	.	T	TTATA	14398.41	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-14.237;DP=484;FS=3.244;HRun=0;HaplotypeScore=65.4987;InbreedingCoeff=0.9774;MQ=74.42;MQ0=0;MQRankSum=-4.544;QD=54.13;ReadPosRankSum=2.634;VQSLOD=5.8144;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:81.28:0,81,1433	0/0:13,0:13:39.12:0,39,663	0/0:11,0:11:24.06:0,24,387	0/0:9,0:9:11.72:0,12,115	0/0:38,0:38:99:0,102,1792	1/1:4,10:15:27.09:674,27,0	1/1:2,5:7:12.04:310,12,0	0/0:36,0:36:99:0,102,1728	1/1:5,10:15:27.09:695,27,0	1/1:3,10:13:30.10:769,30,0	1/1:5,23:28:66.23:1673,66,0	1/1:5,6:12:18.06:459,18,0	0/0:26,0:26:75.25:0,75,1309	1/1:2,5:7:15.05:387,15,0	1/1:5,11:16:27.09:697,27,0	1/1:2,9:11:27.09:696,27,0	1/1:0,15:16:41.93:1020,42,0	1/1:3,5:8:12.04:310,12,0	1/1:1,14:16:45.15:1162,45,0	1/1:3,15:18:45.15:1146,45,0	1/1:1,8:9:16.59:457,17,0	0/0:22,0:22:51.17:0,51,892	0/0:22,0:22:60.20:0,60,1055	0/0:13,0:13:36.12:0,36,630	1/1:4,9:15:18.06:464,18,0	1/1:2,21:23:66.23:1700,66,0	1/1:5,17:23:51.18:1315,51,0	1/1:4,6:13:18.06:465,18,0
chr10	66740164	.	T	TA	5019.06	PASS	AB=0.620;AC=37;AF=0.661;AN=56;BaseQRankSum=-8.973;DP=402;FS=15.543;HRun=12;HaplotypeScore=50.9038;InbreedingCoeff=0.5481;MQ=84.78;MQ0=0;MQRankSum=-1.815;QD=16.96;ReadPosRankSum=0.604;VQSLOD=4.4480;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,11:15:14.15:298,14,0	0/1:2,6:9:3.88:128,0,4	0/0:19,0:18:14.62:0,15,67	0/0:10,0:11:6.31:0,6,30	0/0:12,0:30:41.07:0,41,132	1/1:4,6:11:29.87:271,30,0	1/1:3,9:14:26.72:233,27,0	1/1:4,4:15:29.20:205,29,0	1/1:2,11:13:11.14:270,11,0	1/1:3,13:17:32.20:344,32,0	1/1:4,13:17:23.28:257,23,0	1/1:3,7:11:20.87:189,21,0	0/0:8,0:8:23.85:0,24,173	1/1:2,5:7:13.24:113,13,0	1/1:5,7:12:27.01:248,27,0	1/1:6,6:12:2.94:183,3,0	0/1:5,10:17:2.07:279,0,2	1/1:7,15:22:26.17:416,26,0	0/1:11,6:19:23.06:245,0,23	0/1:8,8:16:7.77:251,0,8	1/1:2,3:5:9.01:88,9,0	0/0:18,1:19:3.58:0,4,188	0/0:12,0:14:27.90:0,28,187	0/0:5,0:5:8.94:0,9,66	1/1:7,8:15:24.04:234,24,0	1/1:6,6:12:8.13:236,8,0	0/1:7,17:25:11.82:362,0,12	1/1:5,6:12:14.17:169,14,0
chr10	66740250	.	T	TA	6012.68	PASS	AB=1.000;AC=38;AF=0.679;AN=56;BaseQRankSum=-9.582;DP=459;FS=7.079;HRun=11;HaplotypeScore=63.6043;InbreedingCoeff=0.7821;MQ=84.34;MQ0=3;MQRankSum=0.604;QD=19.40;ReadPosRankSum=2.225;VQSLOD=6.0267;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:59.77:0,60,464	0/0:6,0:6:14.94:0,15,116	0/1:40,0:20:14.73:15,0,128	0/0:38,0:26:1.05:0,1,120	0/0:4,0:30:43.12:0,43,127	1/1:0,8:8:21.04:213,21,0	1/1:3,11:14:30.06:304,30,0	0/0:18,0:18:32.85:0,33,255	1/1:2,6:8:21.03:207,21,0	1/1:7,10:19:44.75:419,45,0	1/1:2,16:19:50.94:501,51,0	1/1:1,13:14:20.80:213,21,0	0/0:24,0:24:59.67:0,60,457	1/1:0,17:17:39.08:396,39,0	1/1:1,10:11:24.05:244,24,0	1/1:1,12:13:27.05:274,27,0	1/1:2,15:17:45.09:457,45,0	1/1:2,21:24:56.95:562,57,0	1/1:5,9:15:29.83:270,30,0	1/1:3,20:23:54.07:538,54,0	1/1:1,2:3:8.94:78,9,0	0/1:6,0:6:6.61:7,0,98	0/0:10,0:10:29.89:0,30,232	0/0:2,0:1:5.98:0,6,46	1/1:1,13:15:35.91:349,36,0	1/1:4,11:15:33.07:335,33,0	1/1:7,13:20:48.08:479,48,0	1/1:2,5:7:15.03:152,15,0
chr10	66740690	.	TTGTATGTATGAATGTATGTATGTATGTA	T	178.91	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=1.514;DP=551;FS=2.054;HRun=0;HaplotypeScore=367.8581;InbreedingCoeff=0.8692;MQ=57.36;MQ0=2;MQRankSum=0.056;QD=10.52;ReadPosRankSum=-1.977;VQSLOD=1.0007;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:84.03:0,84,6215	0/0:11,0:11:21.07:0,21,2577	0/0:20,0:14:23.35:0,23,617	0/0:8,0:6:15.04:0,15,544	1/1:4,13:17:8.96:262,9,0	0/0:24,0:24:47.95:0,48,908	0/0:19,0:19:26.85:0,27,330	0/0:36,0:36:90.18:0,90,3589	0/0:19,0:19:36:0,36,1055	0/0:25,0:25:53.69:0,54,1834	0/0:23,0:23:53.78:0,54,1038	0/0:12,0:12:15.05:0,15,498	0/0:16,0:16:48.16:0,48,4568	0/0:25,0:25:50.89:0,51,1331	0/0:15,0:15:29.85:0,30,508	0/0:10,0:10:27.01:0,27,757	0/0:22,0:22:27.05:0,27,717	0/0:23,0:23:33.41:0,33,598	0/0:23,0:23:63.13:0,63,1980	0/0:20,0:20:41.97:0,42,1010	0/0:4,0:4:11.90:0,12,224	0/0:21,0:21:57.20:0,57,4767	0/0:15,0:15:39.07:0,39,3100	0/0:17,0:17:45.13:0,45,3726	0/0:27,0:27:59.98:0,60,1505	0/0:34,0:33:93.28:0,93,2908	0/0:19,0:19:33:0,33,959	0/0:15,0:15:29.96:0,30,529
chr10	66740701	.	AATGTATGTATGT	A	9575.77	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=11.882;DP=552;FS=3.861;HRun=0;HaplotypeScore=173.6489;InbreedingCoeff=0.7727;MQ=54.81;MQ0=3;MQRankSum=-8.028;QD=26.45;ReadPosRankSum=3.127;VQSLOD=3.9714;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:63.64:0,64,2887	0/0:8,0:8:24.08:0,24,1340	0/0:16,0:10:3.87:0,4,25	0/0:8,0:5:2.92:0,3,17	1/1:13,0:13:3.01:84,3,0	1/1:10,14:24:6.02:209,6,0	0/0:6,12:18:2.98:0,3,21	0/0:36,0:36:57.14:0,57,1427	1/1:2,17:19:24.08:837,24,0	1/1:5,20:25:45.42:1111,45,0	1/1:8,15:23:15.01:394,15,0	1/1:1,11:12:12.04:418,12,0	0/0:20,0:20:51.16:0,51,2387	1/1:4,21:25:27.09:941,27,0	1/1:3,13:16:6.02:209,6,0	1/1:4,9:13:12.04:419,12,0	1/1:9,14:23:6.02:209,6,0	1/1:7,16:23:5.58:143,6,0	1/1:13,11:22:29.98:756,30,0	1/1:5,13:18:21.07:708,21,0	1/1:4,0:4:2.94:18,3,0	0/0:22,0:22:51.15:0,51,2168	0/0:15,0:15:33.10:0,33,1589	0/0:17,0:17:39.10:0,39,1748	1/1:6,25:31:30.10:1046,30,0	1/1:13,20:32:54.09:1447,54,0	1/1:5,19:24:13.35:520,13,0	1/1:7,5:12:3.01:105,3,0
chr10	66742468	.	GA	G	645	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.803;DP=590;FS=2.949;HRun=10;HaplotypeScore=79.7470;InbreedingCoeff=0.9520;MQ=84.24;MQ0=0;MQRankSum=-2.319;QD=20.16;ReadPosRankSum=1.652;VQSLOD=4.6449;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:63.16:0,63,688	0/0:9,0:9:27.07:0,27,299	0/0:19,0:19:32.91:0,33,336	0/0:19,0:18:21.05:0,21,182	1/1:4,28:32:86.89:740,87,0	0/0:22,1:23:34.10:0,34,597	0/0:25,0:26:59.98:0,60,637	0/0:32,0:33:54.98:0,55,797	0/0:21,0:21:60.13:0,60,646	0/0:26,0:26:49.34:0,49,756	0/0:23,0:23:54.14:0,54,593	0/0:18,0:18:48.11:0,48,522	0/0:24,0:24:57.13:0,57,620	0/0:17,0:17:48.13:0,48,531	0/0:16,1:17:19.06:0,19,431	0/0:20,0:20:54.15:0,54,597	0/0:11,0:11:30.07:0,30,323	0/0:8,0:8:21.03:0,21,221	0/0:23,0:23:33.67:0,34,558	0/0:29,3:34:23.77:0,24,890	0/0:25,0:25:72.19:0,72,796	0/0:20,0:20:54.12:0,54,580	0/0:24,0:24:57.13:0,57,614	0/0:19,0:20:44.83:0,45,517	0/0:16,1:18:27.93:0,28,519	0/0:29,0:29:72.19:0,72,789	0/0:23,0:23:60.09:0,60,632	0/0:5,0:5:12.03:0,12,133
chr10	66743169	.	C	CTT	752.20	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-1.750;DP=487;FS=3.958;HRun=9;HaplotypeScore=67.0990;InbreedingCoeff=0.8478;MQ=63.48;MQ0=2;MQRankSum=-0.604;QD=31.34;ReadPosRankSum=1.511;VQSLOD=4.0103;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:21:42.90:0,43,521	0/0:7,0:7:21.05:0,21,224	0/0:9,0:8:10.58:0,11,137	0/0:7,0:4:7.46:0,7,27	1/1:2,22:24:60.10:847,60,0	0/0:18,0:18:54.14:0,54,575	0/0:7,0:7:15.03:0,15,160	0/0:51,0:52:99:0,117,1231	0/0:12,0:12:30.07:0,30,319	0/0:18,0:18:51.11:0,51,543	0/0:19,0:19:54.14:0,54,574	0/0:19,0:19:48.08:0,48,500	0/0:10,0:10:27.06:0,27,286	0/0:7,0:7:21.05:0,21,224	0/0:16,0:16:42.10:0,42,447	0/0:12,0:12:33.08:0,33,350	0/0:22,0:22:60.10:0,60,617	0/0:20,0:20:57.02:0,57,568	0/0:21,0:21:57.14:0,57,605	0/0:30,0:30:78.16:0,78,822	0/0:15,0:15:45.09:0,45,470	0/0:13,0:13:36.08:0,36,382	0/0:19,0:19:48.09:0,48,501	0/0:10,0:10:30.04:0,30,307	0/0:23,0:23:63.16:0,63,670	0/0:29,0:29:81.17:0,81,846	0/0:22,0:21:51.11:0,51,543	0/0:4,0:4:12.03:0,12,127
chr10	66744621	.	C	CA	755.84	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-5.888;DP=594;FS=2.517;HRun=8;HaplotypeScore=57.2120;InbreedingCoeff=0.9947;MQ=81.36;MQ0=0;MQRankSum=-1.461;QD=26.06;ReadPosRankSum=-0.285;VQSLOD=4.2744;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:93.02:0,93,842	0/0:13,0:13:35.99:0,36,321	0/0:22,0:22:38.97:0,39,399	0/0:15,0:15:23.36:0,23,197	1/1:1,28:29:75.18:851,75,0	0/0:22,0:22:60.01:0,60,544	0/0:16,0:16:42.02:0,42,384	0/0:36,0:36:86.75:0,87,761	0/0:16,0:16:45.02:0,45,412	0/0:24,0:24:56.92:0,57,505	0/0:25,1:26:34.42:0,34,569	0/0:13,0:13:33.01:0,33,302	0/0:25,0:25:63:0,63,571	0/0:12,0:12:33.02:0,33,302	0/0:25,0:25:60.02:0,60,548	0/0:20,0:20:57.03:0,57,522	0/0:16,0:16:41.75:0,42,352	0/0:12,0:12:27.01:0,27,247	0/0:16,0:16:32.97:0,33,296	0/0:40,0:40:99:0,105,943	0/0:15,0:15:42:0,42,379	0/0:20,0:20:54.01:0,54,489	0/0:26,0:26:69:0,69,621	0/0:17,0:17:45:0,45,406	0/0:25,1:26:43.41:0,43,647	0/0:27,0:27:75.04:0,75,687	0/0:15,0:14:42.02:0,42,384	0/0:15,0:15:30:0,30,275
chr10	66745331	.	CCCCA	C	500.55	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.306;DP=527;FS=0.000;HRun=0;HaplotypeScore=94.1201;InbreedingCoeff=0.9506;MQ=67.63;MQ0=0;MQRankSum=0.107;QD=25.03;ReadPosRankSum=-1.910;VQSLOD=3.1203;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:25:75.26:0,75,1956	0/0:10,0:10:30.10:0,30,771	0/0:9,0:9:20.77:0,21,377	0/0:6,0:6:15.02:0,15,274	1/1:0,20:20:39.01:595,39,0	0/0:24,0:24:66.23:0,66,1714	0/0:23,0:23:69.24:0,69,1794	0/0:21,0:21:48.12:0,48,1258	0/0:18,0:18:51.18:0,51,1335	0/0:19,0:18:51.18:0,51,1318	0/0:12,0:12:36.11:0,36,864	0/0:14,0:14:39.13:0,39,1030	0/0:16,0:16:42.14:0,42,1078	0/0:24,0:24:63.22:0,63,1583	0/0:24,0:24:66.23:0,66,1712	0/0:25,0:25:69.24:0,69,1756	0/0:43,0:43:99:0,123,3136	0/0:14,0:14:39.13:0,39,1030	0/0:15,0:15:39.13:0,39,1030	0/0:14,0:14:36.12:0,36,950	0/0:25,0:25:69.24:0,69,1793	0/0:17,0:17:51.18:0,51,1343	0/0:14,0:14:42.14:0,42,1104	0/0:27,0:27:78.27:0,78,2059	0/0:18,0:18:51.18:0,51,1327	0/0:23,0:23:66.20:0,66,1665	0/0:22,0:22:54.19:0,54,1422	0/0:4,0:4:12.04:0,12,317
chr10	66746044	.	C	CA	1019.65	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-5.394;DP=644;FS=1.485;HRun=6;HaplotypeScore=60.6438;InbreedingCoeff=0.8360;MQ=81.22;MQ0=0;MQRankSum=-3.135;QD=30.90;ReadPosRankSum=1.988;VQSLOD=4.3588;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:45.54:0,46,451	0/0:12,0:12:30.05:0,30,299	0/0:18,0:18:45.09:0,45,454	0/0:15,0:15:2.38:0,2,275	1/1:2,31:33:90.25:1114,90,0	0/0:23,0:23:63.14:0,63,643	0/0:12,0:12:27.04:0,27,269	0/0:30,0:30:84.13:0,84,836	0/0:20,0:20:54.12:0,54,551	0/0:31,0:31:90.20:0,90,918	0/0:31,0:31:84.17:0,84,848	0/0:14,0:14:36.03:0,36,346	0/0:27,0:27:78.17:0,78,795	0/0:23,0:23:63.13:0,63,641	0/0:21,0:21:60.13:0,60,612	0/0:22,0:21:57.13:0,57,581	0/0:25,0:25:72.16:0,72,734	0/0:9,0:9:27.06:0,27,273	0/0:30,0:30:81.16:0,81,814	0/0:37,0:37:99:0,99,1010	0/0:20,0:20:54.10:0,54,543	0/0:30,0:30:72.16:0,72,735	0/0:31,0:31:81.18:0,81,826	0/0:11,0:11:30.07:0,30,306	0/0:25,0:25:63.14:0,63,643	0/0:26,0:26:69.14:0,69,698	0/0:33,0:32:99:0,99,1010	0/0:17,0:17:48.11:0,48,490
chr10	66747391	.	T	TTGG	4459.23	PASS	AB=0.829;AC=39;AF=0.696;AN=56;BaseQRankSum=-0.199;DP=516;FS=1.999;HRun=0;HaplotypeScore=89.4803;InbreedingCoeff=0.6291;MQ=82.12;MQ0=2;MQRankSum=0.122;QD=12.70;ReadPosRankSum=-4.859;VQSLOD=3.2937;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:19,0:19:9.69:16,0,10	1/1:9,0:9:3.09:31,3,0	0/0:42,0:27:23.54:0,24,275	0/0:26,0:18:13.12:0,13,207	0/0:3,0:25:65.74:0,66,659	1/1:1,1:23:17.57:207,18,0	1/1:1,0:16:12.36:113,12,0	0/1:22,0:23:97.47:171,0,97	1/1:1,0:19:11.99:149,12,0	1/1:0,0:24:50.15:523,50,0	1/1:2,0:27:45.19:446,45,0	1/1:7,0:8:3.48:48,3,0	0/0:17,0:17:42.12:0,42,697	1/1:0,0:21:11.81:155,12,0	1/1:1,4:11:8.96:120,9,0	1/1:0,0:6:6.02:94,6,0	0/1:2,9:19:31.85:241,0,32	1/1:1,0:11:9.47:114,9,0	1/1:8,1:10:20.89:239,21,0	1/1:4,13:26:56.76:621,57,0	1/1:1,6:9:12.03:234,12,0	0/0:18,0:18:54.15:0,54,800	0/0:24,0:26:73.65:0,74,1038	0/0:8,0:8:24.06:0,24,367	1/1:0,0:26:22.08:199,22,0	1/1:0,6:13:33.40:295,33,0	1/1:1,18:28:21.19:401,21,0	1/1:3,0:3:3.01:44,3,0
chr10	66747463	.	A	AAAAG	1635.06	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-4.252;DP=503;FS=2.759;HRun=0;HaplotypeScore=81.8365;InbreedingCoeff=0.9448;MQ=68.57;MQ0=6;MQRankSum=-0.076;QD=58.39;ReadPosRankSum=2.299;VQSLOD=5.3905;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:54.11:0,54,867	0/0:10,0:10:30.08:0,30,500	0/0:30,0:17:36.03:0,36,431	0/0:25,0:11:26.97:0,27,364	1/1:2,25:28:69.23:1730,69,0	0/0:18,0:18:48.14:0,48,806	0/0:14,0:14:42.13:0,42,726	0/0:25,0:25:69.12:0,69,1123	0/0:10,0:10:27.09:0,27,442	0/0:25,0:25:69.23:0,69,1204	0/0:19,0:19:51.17:0,51,937	0/0:10,0:10:21.07:0,21,391	0/0:15,0:15:42.14:0,42,754	0/0:11,0:11:19.06:0,19,441	0/0:11,0:11:30.10:0,30,517	0/0:8,0:8:21.06:0,21,361	0/0:22,0:22:48.10:0,48,841	0/0:13,0:12:10.97:0,11,523	0/0:17,0:16:48.12:0,48,757	0/0:24,0:24:66.21:0,66,1083	0/0:14,0:14:42.12:0,42,665	0/0:19,0:19:51.15:0,51,878	0/0:19,0:19:48.14:0,48,805	0/0:10,0:10:24.08:0,24,429	0/0:20,0:20:42.14:0,42,770	0/0:24,0:24:69.24:0,69,1261	0/0:25,0:25:68.80:0,69,1179	0/0:16,0:16:45.15:0,45,825
chr10	66770815	.	AC	A	278.10	PASS	AB=0.944;AC=15;AF=0.833;AN=18;BaseQRankSum=-0.716;DP=51;FS=2.066;HRun=1;HaplotypeScore=23.2520;MQ=161.10;MQ0=8;MQRankSum=-2.027;QD=8.18;ReadPosRankSum=-0.239;VQSLOD=0.7416;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/1:9,1:8:39.53:40,0,52	0/1:11,0:12:28.92:52,0,29	1/1:1,0:1:3:25,3,0	./.	./.	./.	./.	0/1:2,0:2:0:0,0,0	./.	./.	1/1:0,1:1:3.01:34,3,0	./.	1/1:0,2:2:3.01:33,3,0	./.	./.	./.	./.	./.	1/1:0,2:2:3.01:38,3,0	1/1:1,0:1:3:26,3,0	./.	./.	./.	1/1:0,3:3:9.03:112,9,0	./.	./.
chr10	66771304	.	TATAC	T	3583.82	PASS	AB=0.955;AC=12;AF=0.214;AN=56;BaseQRankSum=-2.142;DP=842;FS=10.489;HRun=0;HaplotypeScore=163.2917;InbreedingCoeff=0.7855;MQ=62.14;MQ0=17;MQRankSum=-1.442;QD=19.80;ReadPosRankSum=-1.341;VQSLOD=2.5521;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,24:32:27.95:676,28,0	1/1:5,14:19:30.57:496,31,0	0/0:43,0:12:12.93:0,13,255	0/0:41,0:20:1.14:0,1,3	1/1:6,19:25:39.07:644,39,0	0/0:21,0:21:48.15:0,48,1117	0/1:23,1:24:1.30:1,0,1031	1/1:17,23:40:72.23:1110,72,0	0/0:38,0:38:90.31:0,90,2108	0/0:37,0:37:90.31:0,90,2187	0/0:27,0:27:69.24:0,69,1691	0/0:29,0:29:69.03:0,69,1667	0/1:18,1:19:13.41:13,0,770	0/0:27,0:27:69.24:0,69,1585	0/0:32,0:32:84.29:0,84,2059	0/0:36,0:36:87.28:0,87,2039	1/1:5,17:22:39.13:644,39,0	0/0:22,0:22:60.21:0,60,1400	0/0:25,0:25:39.13:0,39,924	0/0:38,0:39:87.30:0,87,2068	0/0:51,0:51:99:0,120,2844	0/0:25,1:26:19.70:0,20,1499	0/0:40,0:40:99:0,111,2683	0/0:21,2:23:7.67:0,8,1266	0/0:25,0:25:66.22:0,66,1507	0/0:28,1:29:24.93:0,25,1647	0/0:33,0:33:84.29:0,84,1971	0/0:17,0:17:27.09:0,27,642
chr10	66773539	.	AACACAC	A	1267.70	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-2.606;DP=623;FS=2.672;HRun=0;HaplotypeScore=171.1780;InbreedingCoeff=0.8953;MQ=61.08;MQ0=4;MQRankSum=-5.230;QD=14.09;ReadPosRankSum=-2.205;VQSLOD=2.7861;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:24,12:38:32.01:640,32,0	1/1:3,4:7:9.03:186,9,0	0/0:32,0:17:3.01:0,3,98	0/0:24,0:16:5.99:0,6,119	0/0:10,0:20:21.41:0,21,436	0/0:31,0:31:45.15:0,45,1104	0/0:22,0:22:21.07:0,21,519	1/1:17,8:26:22.34:366,22,0	0/0:18,0:18:27.09:0,27,666	0/0:34,0:33:69.23:0,69,1682	0/0:15,0:16:26.12:0,26,603	0/0:21,0:22:44.18:0,44,1049	0/0:18,0:23:45.15:0,45,1206	0/0:24,0:24:30.10:0,30,743	0/0:28,0:28:57.20:0,57,1409	0/0:26,0:26:45.15:0,45,1108	1/1:10,8:19:12.92:227,13,0	0/0:14,0:13:21.07:0,21,532	0/0:19,0:19:27.05:0,27,549	0/0:19,0:21:39.13:0,39,974	0/0:29,0:29:36.59:0,37,904	0/0:20,0:23:54.18:0,54,1566	0/0:14,0:18:30.10:0,30,752	0/0:23,0:25:51.17:0,51,1578	0/0:17,0:17:30.10:0,30,739	0/0:18,0:18:48.14:0,48,1098	0/0:17,0:18:36.12:0,36,893	0/0:11,0:11:18.06:0,18,479
chr10	66773547	.	C	CACAT	15173.42	PASS	AB=0.711;AC=33;AF=0.589;AN=56;BaseQRankSum=-12.946;DP=679;FS=1.161;HRun=0;HaplotypeScore=115.1695;InbreedingCoeff=0.7339;MQ=58.10;MQ0=8;MQRankSum=3.696;QD=35.12;ReadPosRankSum=7.813;VQSLOD=4.1639;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:72.08:0,72,652	0/0:8,0:8:18:0,18,170	0/0:28,0:11:29.85:0,30,259	0/0:23,0:13:32.94:0,33,310	0/1:20,0:19:51.50:135,0,51	1/1:5,21:29:47.93:988,48,0	1/1:5,19:29:0.10:539,0,0	0/0:27,0:27:65.82:0,66,562	1/1:4,16:21:27.07:665,27,0	1/1:7,26:34:72.95:1733,73,0	1/1:1,16:17:21.07:565,21,0	1/1:4,24:28:45.14:1144,45,0	0/0:25,0:25:66.08:0,66,900	1/1:1,24:26:29.88:803,30,0	1/1:1,28:30:57.09:1535,57,0	1/1:3,23:26:44.97:1095,45,0	0/0:23,0:23:32.73:0,33,279	0/1:4,9:13:35.62:319,0,36	1/1:4,16:22:14.02:729,14,0	1/1:2,19:23:37.01:936,37,0	1/1:9,22:33:17.96:823,18,0	0/0:25,0:25:65.92:0,66,916	0/0:21,0:21:53.93:0,54,611	0/0:26,0:26:66.12:0,66,1029	1/1:5,16:23:11.09:728,11,0	1/1:0,20:21:62.87:1323,63,0	1/1:7,14:22:34.63:809,35,0	0/1:2,7:11:17.89:304,0,18
chr10	66773549	.	C	CAT	6770.71	PASS	AB=0.969;AC=27;AF=0.482;AN=56;BaseQRankSum=5.669;DP=666;FS=2.491;HRun=0;HaplotypeScore=124.2634;InbreedingCoeff=0.3923;MQ=57.74;MQ0=8;MQRankSum=3.593;QD=16.28;ReadPosRankSum=10.398;VQSLOD=3.9694;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:72.42:0,72,503	0/0:8,0:8:20.84:0,21,155	0/0:29,0:11:29.85:0,30,259	0/0:23,0:13:32.95:0,33,302	0/1:20,0:19:9.76:10,0,74	1/1:24,2:26:47.13:529,47,0	0/1:26,0:26:16.81:209,0,17	0/0:27,0:27:59.95:0,60,548	0/1:19,1:20:13.81:293,0,14	0/1:31,3:33:27.89:809,0,28	1/1:17,0:17:24.06:263,24,0	1/1:26,0:26:24.16:465,24,0	0/0:24,0:24:68.97:0,69,760	1/1:24,0:24:30.08:336,30,0	1/1:29,1:30:57.16:645,57,0	1/1:24,1:25:45.13:557,45,0	0/0:23,0:23:38.45:0,38,256	0/1:13,0:12:6.28:135,0,6	0/1:23,0:22:39.69:363,0,40	1/1:22,0:22:37.35:406,37,0	0/1:30,1:30:3.99:334,0,4	0/0:27,0:27:71.89:0,72,826	0/0:21,0:21:35.44:0,35,505	0/0:27,0:27:69.08:0,69,873	1/1:20,1:21:10.53:347,11,0	1/1:23,0:23:3.89:565,4,0	0/1:20,3:23:4.79:389,0,5	0/1:12,0:12:23.91:117,0,24
chr10	66774341	.	G	GA	12913.39	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=17.183;DP=589;FS=32.704;HRun=0;HaplotypeScore=170.7452;InbreedingCoeff=0.9907;MQ=75.06;MQ0=0;MQRankSum=-13.356;QD=41.13;ReadPosRankSum=0.321;VQSLOD=1.4449;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,135,1840	0/0:9,0:9:27.09:0,27,377	0/0:24,0:24:72.17:0,72,916	0/0:22,0:22:60.19:0,60,797	0/0:15,0:15:39.13:0,39,545	1/1:0,23:22:60.20:956,60,0	1/1:1,22:23:45.15:707,45,0	0/0:29,0:29:81.27:0,81,1121	1/1:2,22:24:66.22:1045,66,0	1/1:3,17:20:57.18:886,57,0	1/1:0,7:7:21.07:324,21,0	1/1:1,14:15:42.14:666,42,0	0/0:33,0:33:99:0,99,1357	1/1:0,14:14:42.14:669,42,0	1/1:5,20:25:63.21:982,63,0	1/1:2,18:20:54.18:850,54,0	0/0:32,0:32:96.28:0,96,1304	1/1:0,12:12:36.12:575,36,0	1/1:3,9:12:33.11:506,33,0	1/1:1,20:21:51.17:813,51,0	1/1:3,21:24:60.20:945,60,0	0/0:10,0:10:27.08:0,27,360	0/0:22,0:22:66.22:0,66,913	0/0:33,0:33:96.32:0,96,1342	1/1:1,21:22:51.17:815,51,0	1/1:3,14:16:42.14:650,42,0	1/1:2,30:32:87.30:1381,87,0	1/1:0,3:3:9.03:144,9,0
chr10	66774370	.	G	GA	3706.76	PASS	AC=30;AF=0.577;AN=52;BaseQRankSum=15.372;DP=376;FS=19.961;HRun=1;HaplotypeScore=140.4471;InbreedingCoeff=0.9709;MQ=95.58;MQ0=0;MQRankSum=-14.513;QD=27.26;ReadPosRankSum=3.958;VQSLOD=2.1495;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,120,1674	0/0:10,0:10:30.10:0,30,419	0/0:20,0:20:49.05:0,49,729	0/0:21,0:21:63.17:0,63,840	0/0:8,0:8:24.08:0,24,331	1/1:0,8:8:24.05:261,24,0	1/1:0,7:7:17.91:167,18,0	0/0:32,0:32:87.28:0,87,1200	1/1:0,10:10:30.06:323,30,0	1/1:2,8:10:30.06:328,30,0	1/1:0,4:4:12.02:137,12,0	1/1:1,4:5:11.97:112,12,0	0/0:31,0:31:93.27:0,93,1269	1/1:0,5:5:14.99:147,15,0	1/1:3,12:14:33.03:324,33,0	1/1:0,17:17:45.47:473,45,0	0/0:29,0:29:84.23:0,84,1132	1/1:0,5:5:12.03:129,12,0	./.	1/1:2,5:7:21:205,21,0	1/1:0,6:6:9.02:104,9,0	0/0:7,0:7:21.07:0,21,294	0/0:14,0:14:42.14:0,42,583	0/0:27,0:27:81.25:0,81,1111	1/1:1,13:14:36.07:387,36,0	1/1:0,7:7:21.05:229,21,0	1/1:4,12:16:38.90:384,39,0	./.
chr10	66774372	.	G	GAGACGAAGCCAAGCCAA	34521.07	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=15.007;DP=543;FS=23.713;HRun=0;HaplotypeScore=483.0914;InbreedingCoeff=0.9687;MQ=82.36;MQ0=0;MQRankSum=-17.617;QD=116.23;ReadPosRankSum=0.631;VQSLOD=4.1826;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,120,5562	0/0:10,0:10:30.10:0,30,1419	0/0:21,0:21:57.17:0,57,2123	0/0:23,0:23:63.21:0,63,2373	0/0:8,0:8:24.08:0,24,1123	1/1:14,3:17:48.16:2021,48,0	1/1:16,4:20:53.48:2951,53,0	0/0:31,0:31:87.29:0,87,3348	1/1:21,4:25:22.83:2653,23,0	1/1:13,3:16:19.37:1803,19,0	1/1:8,1:9:24.36:1211,24,0	1/1:18,3:21:39.10:1639,39,0	0/0:32,0:32:90.27:0,90,3813	1/1:17,3:20:11.77:1547,12,0	1/1:28,8:35:64.21:3840,64,0	1/1:19,13:32:59.29:4159,59,0	0/0:29,0:29:87.30:0,87,3928	1/1:3,3:6:15.05:944,15,0	1/1:11,0:11:27.09:970,27,0	1/1:6,3:9:27.09:1297,27,0	1/1:6,1:7:12.51:385,13,0	0/0:7,0:7:21.07:0,21,1077	0/0:14,0:14:42.13:0,42,1913	0/0:28,0:28:84.26:0,84,3823	1/1:24,4:28:84.26:3504,84,0	1/1:16,3:19:47:2351,47,0	1/1:13,8:21:23.62:3246,24,0	0/0:2,0:2:4.90:0,5,18
chr10	66774376	.	C	CGA	2467.77	PASS	AB=0.836;AC=16;AF=0.286;AN=56;BaseQRankSum=7.793;DP=562;FS=19.730;HRun=0;HaplotypeScore=195.8622;InbreedingCoeff=-0.2165;MQ=82.57;MQ0=0;MQRankSum=-10.070;QD=8.28;ReadPosRankSum=-2.177;VQSLOD=1.7317;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,120,1933	0/0:13,0:13:30.33:0,30,504	0/0:24,0:24:63.21:0,63,990	0/0:24,0:24:57.06:0,57,995	0/0:7,0:7:21.07:0,21,343	0/1:12,5:17:7.17:274,0,7	0/1:19,3:22:30.01:128,0,30	0/0:28,0:28:81.28:0,81,1314	0/1:21,6:27:66.62:317,0,67	0/1:11,5:16:99:242,0,282	0/1:9,3:12:12.09:153,0,12	0/1:19,1:20:36.49:36,0,141	0/0:30,0:30:84.27:0,84,1317	0/1:19,2:21:70.45:90,0,70	0/1:31,4:34:83.13:138,0,83	0/1:29,4:33:99:170,0,265	0/0:29,0:29:87.27:0,87,1393	0/1:4,2:6:43.26:43,0,97	0/0:11,1:12:30:0,30,395	0/1:7,2:9:16.98:145,0,17	1/1:3,5:8:9.23:161,9,0	0/0:8,0:8:24.06:0,24,367	0/0:14,0:14:39.13:0,39,635	0/0:30,0:30:87.27:0,87,1392	0/1:20,9:29:52.73:392,0,53	0/1:18,4:22:99:166,0,355	0/1:17,4:21:99:175,0,245	0/0:2,0:2:5.99:0,6,61
chr10	66774398	.	TC	T	3416.48	PASS	AB=0.715;AC=17;AF=0.304;AN=56;BaseQRankSum=-0.785;DP=741;FS=29.221;HRun=2;HaplotypeScore=135.6109;InbreedingCoeff=-0.4214;MQ=69.75;MQ0=0;MQRankSum=-11.081;QD=7.49;ReadPosRankSum=0.402;VQSLOD=-0.6493;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,138,2021	0/0:15,0:15:42.10:0,42,571	0/0:29,0:29:77.41:0,77,1066	0/0:20,0:20:57.15:0,57,783	0/0:21,0:21:63.19:0,63,920	0/1:17,5:22:99:198,0,375	0/1:17,4:21:99:99,0,339	0/0:39,0:39:99:0,114,1664	0/1:24,10:34:99:235,0,710	0/1:15,15:30:99:456,0,423	0/1:13,14:27:99:151,0,273	0/1:21,9:30:99:153,0,558	0/0:29,0:29:87.28:0,87,1273	0/1:22,8:30:99:121,0,535	0/1:31,11:41:51.82:52,0,906	0/1:28,11:39:99:231,0,842	0/0:27,0:27:78.25:0,78,1148	0/1:4,4:8:54.80:65,0,55	0/1:7,9:15:99:231,0,139	0/1:14,10:24:99:104,0,321	0/1:3,12:15:9.07:290,0,9	0/0:16,0:16:48.15:0,48,700	0/0:12,0:12:33.11:0,33,493	0/0:31,0:31:93.31:0,93,1386	0/1:22,16:38:99:299,0,647	0/1:22,14:35:99:286,0,509	0/1:21,16:37:99:276,0,581	0/1:2,5:7:47.37:169,0,47
chr10	66774563	.	C	CATTT	13727.53	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=13.981;DP=592;FS=1.944;HRun=0;HaplotypeScore=101.6261;InbreedingCoeff=0.9860;MQ=75.46;MQ0=0;MQRankSum=-9.152;QD=46.69;ReadPosRankSum=2.155;VQSLOD=5.7132;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,105,1729	0/0:6,0:6:15.04:0,15,246	0/0:17,0:17:40.55:0,41,559	0/0:16,0:16:29.14:0,29,364	0/0:42,0:42:99:0,120,1920	1/1:5,14:20:39.60:911,40,0	1/1:3,6:10:15.05:326,15,0	0/0:31,0:31:90.22:0,90,1389	1/1:2,13:16:33.11:831,33,0	1/1:3,14:17:42.10:969,42,0	1/1:4,11:15:33.11:684,33,0	1/1:2,14:16:42.14:988,42,0	0/0:24,0:24:69.17:0,69,1126	1/1:2,15:19:39.13:982,39,0	1/1:1,15:16:39.13:983,39,0	1/1:2,15:18:27.09:648,27,0	0/0:31,0:31:87.25:0,87,1536	1/1:3,13:18:24.08:602,24,0	1/1:5,12:17:45:806,45,0	1/1:1,18:20:48.16:1157,48,0	1/1:3,4:7:12.04:265,12,0	0/0:32,0:32:96.31:0,96,1711	0/0:32,0:32:84.21:0,84,1335	0/0:30,0:30:81.26:0,81,1452	1/1:9,27:36:57.52:1181,58,0	1/1:4,18:23:61.72:1270,62,0	1/1:4,13:17:41.13:822,41,0	1/1:3,4:8:12.04:303,12,0
chr10	66775880	.	TGGCTCC	T	6833.01	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=14.726;DP=720;FS=3.041;HRun=0;HaplotypeScore=155.8604;InbreedingCoeff=0.9980;MQ=85.24;MQ0=0;MQRankSum=-14.787;QD=63.86;ReadPosRankSum=0.825;VQSLOD=5.3308;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,32:33:84.29:2137,84,0	1/1:0,7:7:18.06:460,18,0	0/0:27,0:27:81.28:0,81,2817	0/0:25,0:25:72.25:0,72,2448	1/1:0,14:14:33.11:808,33,0	0/0:28,0:28:81.28:0,81,2875	0/0:25,0:25:75.24:0,75,2640	1/1:0,27:27:78.27:1968,78,0	0/0:31,0:32:93.32:0,93,3312	0/0:26,0:26:78.27:0,78,2825	0/0:21,0:20:51.15:0,51,1800	0/0:29,0:29:87.30:0,87,3184	0/0:19,0:19:57.20:0,57,2119	0/0:29,0:29:87.30:0,87,3152	0/0:31,0:31:93.32:0,93,3436	0/0:41,0:41:99:0,123,4469	1/1:0,25:25:57.20:1459,57,0	0/0:21,0:21:63.18:0,63,2259	0/0:17,0:17:51.16:0,51,1658	0/0:23,0:22:60.21:0,60,2187	0/0:56,0:56:99:0,166,6008	0/0:30,0:30:90.31:0,90,3251	0/0:15,0:15:42.14:0,42,1529	0/0:24,0:24:72.25:0,72,2577	0/0:14,0:14:42.13:0,42,1316	0/0:34,0:34:99:0,102,3799	0/0:29,0:29:87.30:0,87,3254	0/0:17,0:16:51.18:0,51,1856
chr10	66776148	.	GCA	G	227.96	PASS	AB=0.906;AC=17;AF=0.304;AN=56;BaseQRankSum=4.314;DP=578;FS=9.270;HRun=0;HaplotypeScore=107.2196;InbreedingCoeff=-0.0936;MQ=61.84;MQ0=8;MQRankSum=0.294;QD=0.76;ReadPosRankSum=1.231;VQSLOD=1.5773;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:36:0.11:0,0,0	1/1:8,0:12:5.68:28,6,0	0/0:32,0:18:3.01:0,3,42	0/0:38,0:20:6.02:0,6,77	0/0:11,0:19:16.60:0,17,88	0/1:21,2:21:5.68:6,0,287	0/1:22,3:28:99:102,0,171	0/0:28,0:25:8.72:0,9,49	0/0:15,0:15:12:0,12,158	0/1:15,1:16:0.65:1,0,229	0/0:15,0:17:15:0,15,133	0/0:20,0:20:24.55:0,25,349	0/0:13,0:13:8.24:0,8,256	0/0:12,0:12:24.06:0,24,337	0/1:17,1:19:28.83:29,0,141	0/1:14,2:16:49.99:50,0,120	1/1:15,0:18:6.58:39,7,0	0/0:18,0:18:29.81:0,30,330	0/1:19,0:20:11.62:12,0,132	0/1:17,1:18:29.03:29,0,152	0/0:32,0:32:15.05:0,15,220	0/0:16,0:17:17.89:0,18,226	0/1:18,1:17:17.70:18,0,144	0/1:23,0:25:13.33:13,0,327	0/1:19,1:20:11.95:12,0,172	0/1:23,1:24:15.44:15,0,185	0/0:16,0:16:18.95:0,19,270	0/1:2,1:3:26.69:27,0,39
chr10	66776191	.	CTCACTCATGCAA	C	1371.64	PASS	AB=0.925;AC=11;AF=0.196;AN=56;BaseQRankSum=4.374;DP=641;FS=8.228;HRun=0;HaplotypeScore=224.0451;InbreedingCoeff=-0.2515;MQ=45.65;MQ0=25;MQRankSum=-3.568;QD=6.50;ReadPosRankSum=-1.610;VQSLOD=1.2773;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:31:34.61:0,35,436	0/1:9,0:8:89.59:90,0,225	0/0:36,0:8:21.54:0,22,676	0/0:55,0:14:40.93:0,41,1364	0/0:29,0:27:17.69:0,18,208	0/0:19,0:16:24.36:0,24,636	0/1:28,0:26:42.16:42,0,984	0/0:43,0:42:43.86:0,44,2576	0/1:16,0:16:99:162,0,420	0/1:11,8:19:99:166,0,649	0/0:15,7:21:17.26:0,17,542	0/1:22,0:22:99:278,0,673	0/0:13,0:13:19.75:0,20,1053	0/0:16,0:15:23.48:0,23,822	0/0:16,0:15:23.92:0,24,733	0/1:17,0:16:66.39:66,0,724	0/1:21,0:21:99:162,0,382	0/1:13,0:13:22.74:23,0,668	0/1:9,8:17:99:309,0,724	0/0:14,0:13:23.75:0,24,633	0/0:38,0:35:53.75:0,54,1512	0/0:22,0:22:51.67:0,52,1653	0/0:20,0:19:45.14:0,45,1861	0/0:32,0:31:85.51:0,86,3278	0/0:18,0:17:8.32:0,8,430	0/1:26,9:32:75.29:75,0,1736	0/1:14,0:14:99:147,0,731	0/0:4,0:4:11.91:0,12,264
chr10	66776195	.	CTCATGCAA	C	898.87	PASS	AB=0.892;AC=13;AF=0.232;AN=56;BaseQRankSum=5.967;DP=632;FS=0.652;HRun=0;HaplotypeScore=194.6349;InbreedingCoeff=-0.3030;MQ=46.98;MQ0=24;MQRankSum=-2.303;QD=3.81;ReadPosRankSum=-0.395;VQSLOD=2.6951;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,1:31:35.06:0,35,435	0/1:8,1:8:55.32:55,0,244	0/0:40,0:10:23.91:0,24,787	0/0:57,0:16:46.31:0,46,1518	0/0:25,3:26:17.83:0,18,195	0/1:17,0:15:37.75:38,0,480	0/1:22,6:26:29.21:29,0,941	0/0:42,0:41:99:0,121,3112	0/1:5,13:18:99:125,0,335	0/1:18,0:18:99:110,0,582	0/0:21,0:20:17.24:0,17,481	0/1:13,13:26:99:229,0,425	0/1:13,0:13:9.27:9,0,826	0/0:12,4:14:23.63:0,24,719	0/0:13,2:14:23.77:0,24,673	0/1:14,3:16:47.22:47,0,705	0/1:17,1:18:76.66:77,0,413	0/1:9,0:9:36.14:36,0,502	0/1:16,0:16:99:174,0,780	0/0:10,5:14:23.11:0,23,534	0/0:32,0:29:51.72:0,52,1498	0/0:22,0:22:51.70:0,52,1634	0/0:19,0:19:32.95:0,33,1821	0/0:32,0:31:86.91:0,87,3020	0/0:12,8:19:15.84:0,16,406	0/1:33,0:30:22:22,0,1646	0/1:11,3:14:99:101,0,688	0/0:4,0:4:12.01:0,12,267
chr10	66776254	.	C	CA	3943.40	PASS	AB=0.909;AC=11;AF=0.196;AN=56;BaseQRankSum=-0.490;DP=560;FS=15.979;HRun=1;HaplotypeScore=90.7797;InbreedingCoeff=0.8666;MQ=65.72;MQ0=3;MQRankSum=-3.604;QD=36.85;ReadPosRankSum=0.909;VQSLOD=2.1099;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,24:24:69.22:1031,69,0	1/1:1,10:11:33.08:469,33,0	0/0:39,0:31:80.20:0,80,1030	0/0:30,0:22:64.98:0,65,761	1/1:2,18:20:51.13:738,51,0	0/0:11,0:11:33.11:0,33,429	0/0:24,0:23:51.17:0,51,662	1/1:2,19:20:57.19:854,57,0	0/0:25,0:25:45.15:0,45,584	0/0:23,0:23:66.14:0,66,857	0/0:12,0:12:21.07:0,21,272	0/0:26,0:26:63.20:0,63,817	0/0:20,0:20:57.12:0,57,704	0/0:12,0:12:29.44:0,29,388	0/0:16,0:16:42.14:0,42,543	0/0:15,0:15:42.14:0,42,545	1/1:2,19:20:57.18:833,57,0	0/1:9,1:9:17.86:18,0,268	0/0:23,0:23:63.19:0,63,804	0/0:16,0:16:36.12:0,36,467	0/0:34,0:32:66.18:0,66,856	0/0:19,0:19:57.19:0,57,740	0/0:23,0:23:69.22:0,69,896	0/0:26,0:26:78.23:0,78,995	0/0:26,0:26:54.16:0,54,687	0/0:15,0:15:45.15:0,45,584	0/0:15,0:15:39.13:0,39,506	0/0:2,0:2:6.02:0,6,78
chr10	66776333	.	ACT	A	4808.32	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=15.933;DP=720;FS=1.661;HRun=0;HaplotypeScore=100.6165;InbreedingCoeff=0.9995;MQ=92.63;MQ0=0;MQRankSum=-4.021;QD=35.88;ReadPosRankSum=1.841;VQSLOD=6.8182;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,34:40:99:1379,102,0	1/1:1,7:8:24.08:329,24,0	0/0:37,0:37:99:0,99,1629	0/0:28,0:28:74.63:0,75,1155	1/1:0,28:28:78.26:1064,78,0	0/0:27,0:26:72.25:0,72,1273	0/0:31,0:31:87.30:0,87,1517	1/1:6,20:26:60.20:823,60,0	0/0:20,0:20:57.20:0,57,1005	0/0:22,0:22:54.19:0,54,957	0/0:19,0:19:54.19:0,54,958	0/0:28,0:28:81.26:0,81,1403	0/0:20,0:20:51.17:0,51,905	0/0:28,0:27:75.26:0,75,1328	0/0:36,0:36:99:0,102,1747	0/0:26,0:26:63.22:0,63,1107	1/1:2,30:32:90.26:1214,90,0	0/0:20,0:19:51.17:0,51,904	0/0:19,0:19:51.17:0,51,877	0/0:27,0:27:75.26:0,75,1329	0/0:40,0:39:99:0,117,2034	0/0:22,0:22:63.22:0,63,1109	0/0:21,0:21:63.20:0,63,1078	0/0:23,0:23:63.19:0,63,1087	0/0:21,0:21:57.20:0,57,1011	0/0:35,1:36:55.09:0,55,1580	0/0:23,0:23:69.24:0,69,1223	0/0:12,0:12:36.12:0,36,639
chr10	66777089	.	TAATG	T	818.53	PASS	AB=0.950;AC=5;AF=0.089;AN=56;BaseQRankSum=9.616;DP=572;FS=25.201;HRun=0;HaplotypeScore=104.7372;InbreedingCoeff=-0.0985;MQ=71.81;MQ0=0;MQRankSum=-7.891;QD=8.71;ReadPosRankSum=-2.422;VQSLOD=0.4991;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:22:99:156,0,924	0/1:9,0:9:99:135,0,299	0/0:17,0:15:28:0,28,1030	0/0:16,0:14:27.04:0,27,708	0/1:16,7:24:99:303,0,1101	0/0:22,0:22:66.23:0,66,1763	0/0:11,0:11:33.09:0,33,837	0/1:14,0:14:99:136,0,421	0/0:21,0:21:63.22:0,63,1630	0/0:38,0:38:99:0,114,2973	0/0:26,0:26:75.26:0,75,1983	0/0:21,0:21:63.20:0,63,1658	0/0:20,0:20:60.21:0,60,1575	0/0:22,0:22:66.23:0,66,1802	0/0:23,0:23:69.24:0,69,1859	0/0:17,0:17:51.18:0,51,1262	0/1:25,0:25:99:206,0,895	0/0:21,0:21:63.22:0,63,1699	0/0:18,0:17:54.19:0,54,1413	0/0:36,0:36:99:0,108,2867	0/0:6,0:6:18.06:0,18,491	0/0:11,0:11:30.10:0,30,819	0/0:19,0:19:57.20:0,57,1487	0/0:10,0:10:30.10:0,30,799	0/0:31,0:31:93.32:0,93,2511	0/0:27,0:27:78.26:0,78,2096	0/0:35,0:35:99:0,105,2650	0/0:10,0:10:30.10:0,30,710
chr10	66777097	.	TAC	T	906.61	PASS	AB=0.737;AC=5;AF=0.089;AN=56;BaseQRankSum=9.792;DP=580;FS=36.284;HRun=0;HaplotypeScore=81.5633;InbreedingCoeff=-0.0991;MQ=70.14;MQ0=0;MQRankSum=-8.281;QD=8.89;ReadPosRankSum=-2.920;VQSLOD=1.2489;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:14,9:23:99:198,0,569	0/1:5,4:9:99:158,0,252	0/0:14,0:12:15.44:0,15,450	0/0:19,0:16:18.54:0,19,483	0/1:16,0:23:99:119,0,720	0/0:25,0:25:75.26:0,75,1375	0/0:11,0:11:33.10:0,33,567	0/1:11,6:17:99:241,0,553	0/0:20,0:20:60.19:0,60,1074	0/0:41,0:41:99:0,123,2233	0/0:26,0:26:75.25:0,75,1350	0/0:19,0:19:57.20:0,57,1054	0/0:20,0:20:60.21:0,60,1099	0/0:22,0:22:66.23:0,66,1221	0/0:24,0:24:72.25:0,72,1335	0/0:15,0:15:45.15:0,45,831	0/1:21,9:30:99:308,0,736	0/0:24,0:24:72.21:0,72,1286	0/0:18,0:17:54.18:0,54,984	0/0:38,0:38:99:0,114,2066	0/0:8,0:8:24.07:0,24,415	0/0:11,0:11:33.10:0,33,577	0/0:16,0:16:48.16:0,48,895	0/0:11,0:11:33.11:0,33,599	0/0:29,0:29:87.30:0,87,1584	0/0:27,0:27:81.28:0,81,1494	0/0:30,0:30:90.31:0,90,1670	0/0:10,0:10:30.10:0,30,552
chr10	66777258	.	TTA	T	3146.89	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=12.385;DP=624;FS=9.812;HRun=0;HaplotypeScore=87.8540;InbreedingCoeff=0.9889;MQ=70.00;MQ0=0;MQRankSum=-6.362;QD=33.84;ReadPosRankSum=-2.020;VQSLOD=5.1980;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,16:20:42.53:591,43,0	1/1:0,4:4:12.04:184,12,0	0/0:12,0:10:30.09:0,30,512	0/0:14,0:14:35.95:0,36,637	1/1:1,17:18:36.08:525,36,0	0/0:15,0:15:45.15:0,45,867	0/0:29,0:29:87.28:0,87,1633	1/1:1,32:33:96.28:1405,96,0	0/0:22,0:22:66.23:0,66,1241	0/0:27,0:27:81.28:0,81,1542	0/0:19,0:19:57.18:0,57,1057	0/0:19,0:19:57.20:0,57,1083	0/0:17,0:17:51.17:0,51,954	0/0:24,0:24:69.20:0,69,1255	0/0:29,0:29:87.30:0,87,1669	0/0:29,0:29:87.30:0,87,1649	1/1:1,17:18:42.61:615,43,0	0/0:20,0:20:60.21:0,60,1156	0/0:21,0:21:63.22:0,63,1197	0/0:28,0:28:81.25:0,81,1489	0/0:32,0:32:96.32:0,96,1784	0/0:18,0:18:54.16:0,54,981	0/0:19,0:19:57.20:0,57,1044	0/0:40,0:40:99:0,120,2246	0/0:29,0:29:87.28:0,87,1638	0/0:28,0:28:81.26:0,81,1509	0/0:33,0:33:96.33:0,96,1811	0/0:7,0:7:15.05:0,15,289
chr10	66777292	.	GCA	G	612.83	PASS	AB=0.871;AC=7;AF=0.130;AN=54;BaseQRankSum=9.321;DP=677;FS=0.000;HRun=0;HaplotypeScore=106.0449;InbreedingCoeff=0.8690;MQ=61.60;MQ0=3;MQRankSum=-6.501;QD=8.06;ReadPosRankSum=-2.733;VQSLOD=2.6953;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:23,4:27:1.11:99,0,1	1/1:8,0:8:5.30:45,5,0	0/0:28,0:19:53.20:0,53,922	0/0:29,0:24:62.80:0,63,1142	./.	0/0:19,0:19:57.18:0,57,1059	0/0:31,0:31:90.31:0,90,1672	1/1:13,10:19:38.98:424,39,0	0/0:24,0:24:72.02:0,72,1353	0/0:23,0:23:69.19:0,69,1316	0/0:30,0:30:90.10:0,90,1650	0/0:24,0:24:72.25:0,72,1377	0/0:18,0:18:53.96:0,54,1001	0/0:21,0:21:63.22:0,63,1234	0/0:23,0:23:69.24:0,69,1345	0/0:27,0:27:78.25:0,78,1446	1/1:14,4:18:19.25:183,19,0	0/0:31,0:31:62.48:0,62,1469	0/0:21,0:20:60.21:0,60,1141	0/0:20,0:20:60.21:0,60,1155	0/0:35,0:35:99:0,102,1928	0/0:18,0:18:54.18:0,54,1036	0/0:18,0:18:53.97:0,54,999	0/0:51,0:51:99:0,139,2580	0/0:35,0:35:99:0,105,2074	0/0:26,0:26:78.11:0,78,1357	0/0:32,0:32:96.33:0,96,1779	0/0:6,0:6:18.06:0,18,277
chr10	66777458	.	CT	C	449.69	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.592;DP=631;FS=2.093;HRun=5;HaplotypeScore=69.4611;InbreedingCoeff=0.9979;MQ=84.54;MQ0=0;MQRankSum=-2.108;QD=26.45;ReadPosRankSum=1.502;VQSLOD=3.3861;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:96.32:0,96,1310	0/0:10,0:10:30.10:0,30,410	0/0:20,0:20:57.08:0,57,703	0/0:27,0:26:68.40:0,68,882	0/0:31,0:31:90.30:0,90,1231	0/0:15,0:15:45.15:0,45,615	0/0:21,0:21:60.20:0,60,821	0/0:37,0:37:96.28:0,96,1278	0/0:22,0:22:63.20:0,63,846	0/0:25,0:25:72.23:0,72,974	0/0:21,0:21:60.20:0,60,821	0/0:21,0:21:57.19:0,57,779	0/0:16,0:16:48.16:0,48,656	0/0:20,0:20:57.19:0,57,779	0/0:19,0:19:57.19:0,57,780	1/1:0,17:17:48.14:545,48,0	0/0:25,0:25:69.23:0,69,943	0/0:10,0:10:27.09:0,27,369	0/0:22,0:22:60.20:0,60,819	0/0:37,0:37:99:0,108,1476	0/0:23,0:23:66.22:0,66,901	0/0:14,0:14:39.13:0,39,534	0/0:31,0:31:90.30:0,90,1231	0/0:18,0:18:45.14:0,45,599	0/0:19,0:19:57.19:0,57,780	0/0:35,0:35:99:0,105,1435	0/0:31,0:31:90.29:0,90,1216	0/0:10,0:10:30.10:0,30,410
chr10	66778028	.	T	TAAA	4218.39	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=13.878;DP=640;FS=11.907;HRun=6;HaplotypeScore=100.0401;InbreedingCoeff=0.9973;MQ=72.11;MQ0=0;MQRankSum=-4.862;QD=29.71;ReadPosRankSum=-2.046;VQSLOD=1.6087;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,37:45:78.53:1487,79,0	1/1:2,10:14:24.01:430,24,0	0/0:19,0:19:30.32:0,30,628	0/0:10,0:10:17.82:0,18,234	1/1:6,24:32:46.87:636,47,0	0/0:22,0:22:66.21:0,66,913	0/0:32,0:32:81.25:0,81,1141	1/1:6,22:31:74.97:1101,75,0	0/0:23,0:23:62.76:0,63,833	0/0:28,0:28:72.13:0,72,969	0/0:16,0:16:45.12:0,45,600	0/0:23,0:23:60.14:0,60,811	0/0:24,0:24:72.19:0,72,994	0/0:17,0:17:42.11:0,42,573	0/0:23,0:23:69.20:0,69,944	0/0:21,0:21:60.13:0,60,756	1/1:5,14:20:32.97:564,33,0	0/0:23,0:23:66.19:0,66,904	0/0:14,0:14:42.12:0,42,558	0/0:19,0:19:51.17:0,51,724	0/0:35,0:34:93.26:0,93,1255	0/0:23,0:23:57.16:0,57,771	0/0:20,0:20:48.15:0,48,678	0/0:25,0:25:69.20:0,69,940	0/0:17,0:17:42.08:0,42,541	0/0:20,0:20:51.16:0,51,703	0/0:32,0:32:84.24:0,84,1148	0/0:12,0:12:32.47:0,32,434
chr10	66778649	.	T	TTC	2029.93	PASS	AB=1.000;AC=12;AF=0.214;AN=56;BaseQRankSum=-2.957;DP=534;FS=44.073;HRun=0;HaplotypeScore=87.7101;InbreedingCoeff=0.7585;MQ=71.46;MQ0=3;MQRankSum=1.675;QD=12.77;ReadPosRankSum=-2.316;VQSLOD=1.4515;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,21:28:18.87:240,19,0	1/1:0,9:9:18.06:297,18,0	0/0:25,0:11:0.42:0,0,150	0/1:23,0:16:1.26:1,0,134	1/1:3,19:28:41.77:594,42,0	0/0:20,0:20:59.88:0,60,496	0/0:17,0:17:32.90:0,33,272	1/1:8,5:28:62.69:667,63,0	0/1:13,0:15:15.88:16,0,178	0/0:23,0:24:53.82:0,54,460	0/0:14,0:14:37.13:0,37,289	0/0:15,0:15:41.90:0,42,339	0/0:17,0:17:12.75:0,13,279	0/0:17,0:18:38.82:0,39,319	0/0:13,0:14:38.88:0,39,314	0/0:12,0:14:35.62:0,36,273	1/1:2,21:28:26.52:389,27,0	0/0:11,0:11:26.88:0,27,231	0/0:18,0:18:44.06:0,44,387	0/0:21,0:22:59.69:0,60,480	0/0:17,0:17:28.31:0,28,365	0/0:17,0:17:45.55:0,46,412	0/0:22,0:22:56.69:0,57,567	0/0:23,0:23:27.67:0,28,438	0/0:17,0:18:44.93:0,45,395	0/0:20,0:20:56.93:0,57,499	0/0:27,0:27:71.44:0,71,582	0/0:2,0:2:5.99:0,6,48
chr10	66780277	.	TA	T	2400.43	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-8.882;DP=445;FS=8.809;HRun=11;HaplotypeScore=66.5239;InbreedingCoeff=0.9349;MQ=73.23;MQ0=1;MQRankSum=1.297;QD=18.32;ReadPosRankSum=1.093;VQSLOD=4.5688;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,27:32:68.89:566,69,0	1/1:0,14:14:38.95:320,39,0	0/0:15,0:12:17.33:0,17,108	0/0:18,0:14:15.04:0,15,178	1/1:1,23:24:65.90:541,66,0	0/0:20,0:20:45.11:0,45,480	0/0:13,0:13:33.97:0,34,354	1/1:8,33:41:74.65:753,75,0	0/0:16,0:16:42.08:0,42,437	0/0:22,0:22:60.10:0,60,621	0/0:13,1:14:14.46:0,14,359	0/0:11,0:11:27.07:0,27,288	0/0:10,1:11:2.38:0,2,212	0/0:11,0:11:27.07:0,27,288	0/0:15,0:15:39.09:0,39,410	0/0:7,0:7:21.04:0,21,218	1/1:1,19:20:47.94:394,48,0	0/0:10,0:10:30.03:0,30,300	0/0:22,0:23:53.99:0,54,551	0/0:22,0:22:57.14:0,57,607	0/0:7,0:7:15.02:0,15,152	0/0:5,0:5:14.97:0,15,146	0/0:16,0:16:30.08:0,30,320	0/0:12,0:12:36.09:0,36,384	0/0:11,0:11:30.05:0,30,310	0/0:15,0:15:39.08:0,39,403	0/0:15,0:15:42.08:0,42,432	0/0:5,0:5:15.02:0,15,151
chr10	66780649	.	AGACTGTCTGAGGTTTCTTTTCAAACT	A	6169.68	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=8.111;DP=526;FS=2.271;HRun=0;HaplotypeScore=388.0538;InbreedingCoeff=0.9701;MQ=87.25;MQ0=0;MQRankSum=-7.198;QD=74.33;ReadPosRankSum=1.404;VQSLOD=3.0574;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:7,7:14:18.06:1213,18,0	1/1:3,9:12:21.07:1482,21,0	0/0:20,0:21:57.18:0,57,2888	0/0:18,0:18:51.17:0,51,2935	1/1:12,15:27:41.15:2178,41,0	0/0:29,0:29:84.29:0,84,8547	0/0:20,0:20:57.20:0,57,5473	1/1:18,0:18:6.02:109,6,0	0/0:17,0:17:51.16:0,51,4932	0/0:27,0:27:75.26:0,75,7136	0/0:14,0:14:33.11:0,33,3404	0/0:17,0:17:48.16:0,48,5165	0/0:23,0:23:69.24:0,69,7134	0/0:16,0:16:48.15:0,48,4454	0/0:23,0:23:69.24:0,69,7193	0/0:13,0:13:36.12:0,36,3248	1/1:3,9:12:18.06:1188,18,0	0/0:22,0:22:66.19:0,66,6635	0/0:25,0:25:63.22:0,63,4846	0/0:25,0:25:72.25:0,72,8060	0/0:24,0:24:72.25:0,72,7142	0/0:18,0:18:42.14:0,42,4518	0/0:12,0:12:33.11:0,33,3571	0/0:21,0:21:63.21:0,63,7012	0/0:13,0:13:39.13:0,39,3864	0/0:15,0:15:42.14:0,42,4025	0/0:20,0:20:60.21:0,60,6422	0/0:10,0:10:30.10:0,30,2323
chr10	66781078	.	G	GT	5472.10	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=5.967;DP=608;FS=43.346;HRun=1;HaplotypeScore=68.0205;InbreedingCoeff=0.9958;MQ=71.39;MQ0=5;MQRankSum=-1.936;QD=39.94;ReadPosRankSum=-0.361;VQSLOD=1.7004;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,41:43:99:1660,111,0	1/1:1,15:16:29.19:611,29,0	0/0:23,0:18:43.64:0,44,487	0/0:23,0:13:32.83:0,33,350	1/1:0,28:28:78.26:1166,78,0	0/0:26,0:26:75.21:0,75,931	0/0:30,0:30:78.25:0,78,1011	1/1:5,18:22:65.99:823,66,0	0/0:11,0:11:27.06:0,27,322	0/0:27,0:27:78.24:0,78,991	0/0:21,0:21:60.19:0,60,776	0/0:23,0:23:60.10:0,60,730	0/0:12,0:12:36.12:0,36,466	0/0:18,0:18:54.18:0,54,699	0/0:17,0:16:51.07:0,51,626	0/0:11,0:11:33.11:0,33,428	1/1:0,27:27:81.27:1211,81,0	0/0:20,0:20:60.08:0,60,724	0/0:21,0:20:54.16:0,54,675	0/0:22,0:22:66.20:0,66,841	0/0:24,0:24:72.23:0,72,933	0/0:19,0:19:51.10:0,51,626	0/0:24,0:24:69.22:0,69,893	0/0:30,0:30:87.26:0,87,1107	0/0:18,0:18:51.13:0,51,632	0/0:26,0:26:78.25:0,78,1012	0/0:19,0:19:51.08:0,51,634	0/0:6,0:6:15.05:0,15,194
chr10	66781160	.	CA	C	4809.12	PASS	AB=0.591;AC=33;AF=0.589;AN=56;BaseQRankSum=-6.616;DP=544;FS=21.224;HRun=12;HaplotypeScore=73.7158;InbreedingCoeff=0.9016;MQ=60.82;MQ0=9;MQRankSum=1.089;QD=16.08;ReadPosRankSum=3.235;VQSLOD=4.1688;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:42:87.39:0,87,446	0/0:4,0:12:28.57:0,29,158	0/0:12,1:8:1.71:0,2,158	0/0:9,0:5:8.62:0,9,81	0/0:18,0:28:40.92:0,41,231	1/1:2,18:20:23.36:364,23,0	1/1:2,21:23:50.80:395,51,0	0/0:6,0:31:68.02:0,68,341	1/1:4,17:21:44.81:348,45,0	1/1:0,19:19:56.78:441,57,0	1/1:4,15:20:43.84:331,44,0	1/1:4,19:23:17.44:298,17,0	0/0:12,0:12:30.05:0,30,297	1/1:3,14:17:14.45:282,14,0	1/1:2,12:16:33.94:244,34,0	1/1:2,12:15:37.89:285,38,0	0/0:8,0:29:62.76:0,63,334	1/1:2,18:20:52.84:401,53,0	1/1:6,14:18:19.21:281,19,0	1/1:6,6:13:19.91:145,20,0	1/1:4,12:17:28.92:215,29,0	0/0:20,1:21:16.25:0,16,327	0/0:18,0:18:38.90:0,39,374	0/0:26,0:27:62.96:0,63,623	0/1:4,9:13:2.09:139,0,2	1/1:6,7:12:20.88:162,21,0	1/1:3,19:22:26.32:387,26,0	1/1:1,5:6:11.95:93,12,0
chr10	66782397	.	AATAAG	A	4524.45	PASS	AB=0.950;AC=11;AF=0.196;AN=56;BaseQRankSum=12.298;DP=538;FS=15.843;HRun=0;HaplotypeScore=100.6196;InbreedingCoeff=0.8902;MQ=72.41;MQ0=0;MQRankSum=-11.414;QD=34.80;ReadPosRankSum=-1.746;VQSLOD=3.4485;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,28:28:45.06:907,45,0	1/1:0,8:8:18.06:372,18,0	0/0:19,0:19:44.69:0,45,1296	0/0:11,0:11:28.63:0,29,689	1/1:0,20:20:51.09:937,51,0	0/0:19,0:19:54.17:0,54,1619	0/0:19,0:19:57.18:0,57,1746	1/1:7,19:23:63.19:1258,63,0	0/0:15,0:15:45.15:0,45,1404	0/0:18,0:18:54.18:0,54,1614	0/0:22,0:22:66.21:0,66,2049	0/0:13,0:13:39.13:0,39,1260	0/0:22,0:22:63.22:0,63,1989	0/0:24,0:24:72.25:0,72,2184	0/0:19,0:19:57.20:0,57,1814	0/0:22,0:22:63.19:0,63,1864	1/1:3,26:29:48.16:1037,48,0	0/1:18,1:19:12.64:13,0,1489	0/0:24,0:24:72.23:0,72,2124	0/0:19,0:19:54.15:0,54,1479	0/0:14,0:14:42.11:0,42,1250	0/0:17,0:17:51.16:0,51,1569	0/0:13,0:13:39.12:0,39,1139	0/0:12,0:12:33.11:0,33,991	0/0:21,0:21:60.18:0,60,1788	0/0:24,0:24:72.24:0,72,2073	0/0:30,0:30:84.29:0,84,2602	0/0:11,0:11:33.11:0,33,1015
chr10	66783062	.	GA	G	1287.66	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=7.102;DP=456;FS=3.355;HRun=8;HaplotypeScore=61.3300;InbreedingCoeff=0.9343;MQ=73.33;MQ0=0;MQRankSum=-7.862;QD=19.22;ReadPosRankSum=-3.097;VQSLOD=2.7691;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,9:10:0.82:152,1,0	1/1:0,9:9:24.04:232,24,0	0/0:14,0:14:30.06:0,30,326	0/0:12,0:12:15.17:0,15,269	1/1:2,15:17:29.05:288,29,0	0/0:26,0:26:65.41:0,65,768	0/0:16,0:16:48.15:0,48,580	1/1:2,22:24:63.09:608,63,0	0/0:19,0:19:48.15:0,48,580	0/0:30,0:30:78.19:0,78,899	0/0:20,0:20:45.14:0,45,540	0/0:14,0:14:28.15:0,28,318	0/0:17,0:17:45.14:0,45,543	0/0:14,0:14:33.06:0,33,382	0/0:12,0:12:30.08:0,30,348	0/0:17,0:17:36.11:0,36,432	1/1:1,6:7:18.03:173,18,0	0/0:12,0:12:24.07:0,24,287	0/0:22,0:22:63.19:0,63,769	0/0:15,0:15:39.12:0,39,471	0/0:20,0:20:48.15:0,48,576	0/0:21,0:21:60.18:0,60,722	0/0:9,0:9:24.07:0,24,289	0/0:10,0:10:27.07:0,27,315	0/0:11,0:11:24.07:0,24,290	0/0:16,0:16:38.90:0,39,452	0/0:27,0:27:72.18:0,72,853	0/0:15,0:15:42.13:0,42,506
chr10	66783115	.	A	ATCTCTCTC	15711.91	PASS	AB=1.000;AC=41;AF=0.759;AN=54;BaseQRankSum=-3.984;DP=573;FS=0.000;HRun=0;HaplotypeScore=162.8260;InbreedingCoeff=0.7822;MQ=66.40;MQ0=0;MQRankSum=-9.449;QD=36.54;ReadPosRankSum=-2.547;VQSLOD=3.6360;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:19:3.01:68,3,0	./.	0/0:24,0:16:17.11:0,17,248	0/0:41,0:30:1.16:0,1,300	1/1:17,0:17:2.85:91,3,0	1/1:13,10:25:21.02:705,21,0	1/1:12,15:27:17.96:1039,18,0	1/1:47,0:44:27.40:518,27,0	1/1:8,4:13:18.06:636,18,0	1/1:16,15:32:66.22:2333,66,0	1/1:5,3:12:3.01:125,3,0	1/1:7,9:18:18.63:596,19,0	0/0:20,0:21:54.18:0,54,1361	1/1:9,6:15:12.04:497,12,0	1/1:8,9:20:33:1310,33,0	1/1:4,14:19:20.41:1307,20,0	1/1:9,0:9:6.02:229,6,0	1/1:8,2:15:9.03:314,9,0	1/1:11,7:20:41.63:1292,42,0	1/1:10,9:20:24.08:933,24,0	0/1:21,0:21:0:0,0,0	0/0:16,0:16:30.09:0,30,706	0/0:14,0:14:27.09:0,27,665	0/0:16,0:19:51.15:0,51,1163	1/1:7,11:21:20.24:771,20,0	1/1:10,9:18:39.13:1375,39,0	1/1:14,9:25:21.54:814,22,0	1/1:8,5:14:23.44:759,23,0
chr10	66784345	.	AT	A	2920.58	PASS	AB=0.923;AC=11;AF=0.196;AN=56;BaseQRankSum=11.888;DP=528;FS=8.938;HRun=9;HaplotypeScore=54.0654;InbreedingCoeff=0.8604;MQ=68.48;MQ0=0;MQRankSum=1.367;QD=20.71;ReadPosRankSum=-0.235;VQSLOD=3.8735;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,30:31:87.04:796,87,0	1/1:2,10:12:27.01:247,27,0	0/1:11,1:12:0.48:0,0,224	0/0:6,0:6:4.88:0,5,31	1/1:1,36:37:96.04:878,96,0	0/0:6,0:6:18.05:0,18,208	0/0:17,0:17:45.13:0,45,519	1/1:6,26:32:78:704,78,0	0/0:15,0:15:42.12:0,42,485	0/0:21,0:21:51.15:0,51,588	0/0:28,0:28:66.20:0,66,762	0/0:10,0:10:27.08:0,27,312	0/0:20,0:20:57.17:0,57,658	0/0:12,1:13:8.64:0,9,353	0/0:26,0:26:78.22:0,78,891	0/0:21,0:21:54.16:0,54,623	1/1:0,17:17:51.03:467,51,0	0/0:10,0:10:30.09:0,30,346	0/0:21,0:21:37.21:0,37,551	0/0:24,0:24:69.21:0,69,796	0/0:7,0:7:21.06:0,21,242	0/0:21,0:21:54.16:0,54,623	0/0:15,0:15:36.09:0,36,405	0/0:1,0:1:3.01:0,3,35	0/0:28,0:28:78.23:0,78,900	0/0:25,0:25:69.20:0,69,794	0/0:35,0:34:99:0,99,1143	0/0:17,0:17:51.13:0,51,577
chr10	66784633	.	A	AACACACACACACACACAC	9224.88	PASS	AB=1.000;AC=40;AF=0.714;AN=56;BaseQRankSum=-3.079;DP=715;FS=11.784;HRun=0;HaplotypeScore=304.4954;InbreedingCoeff=0.6854;MQ=54.69;MQ0=6;MQRankSum=-2.717;QD=17.91;ReadPosRankSum=-1.245;VQSLOD=2.0009;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:18.05:0,18,573	0/0:14,0:14:12.04:0,12,304	1/1:34,0:20:4.07:12,4,0	0/0:36,0:18:9.01:0,9,136	1/1:14,0:14:9.31:157,9,0	1/1:14,0:27:22:832,22,0	1/1:24,0:36:24.05:603,24,0	0/1:22,0:21:28.79:50,0,29	1/1:12,16:42:9.03:345,9,0	1/1:23,0:26:45.12:696,45,0	1/1:13,0:21:9.40:154,9,0	1/1:8,5:21:3.90:254,4,0	0/0:10,0:16:17.15:0,17,942	1/1:18,0:25:18.49:535,18,0	1/1:20,0:29:20.98:719,21,0	1/1:16,0:21:12.02:284,12,0	0/1:23,0:21:11.86:12,0,695	1/1:5,0:17:5.81:208,6,0	1/1:12,0:16:25.78:547,26,0	1/1:8,0:16:0.47:1,0,0	1/1:21,0:28:19.31:417,19,0	0/0:24,0:26:39.99:0,40,1043	0/0:20,0:24:39.04:0,39,1422	0/0:40,0:44:53.85:0,54,2757	1/1:12,0:16:9.02:328,9,0	1/1:13,0:23:45.96:1359,46,0	1/1:19,0:30:40.37:1370,40,0	1/1:5,0:8:9.03:342,9,0
chr10	66784659	.	CACATACACACAG	C	1966.38	PASS	AB=0.989;AC=10;AF=0.179;AN=56;BaseQRankSum=4.313;DP=748;FS=13.353;HRun=0;HaplotypeScore=229.9671;InbreedingCoeff=0.5666;MQ=51.83;MQ0=10;MQRankSum=-2.705;QD=10.99;ReadPosRankSum=-0.714;VQSLOD=1.1976;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:40,2:42:15.05:392,15,0	1/1:11,1:11:15.05:317,15,0	0/0:27,0:14:39.04:0,39,808	0/0:51,0:26:63.42:0,63,1758	0/1:22,0:22:99:151,0,479	0/0:29,0:27:25.49:0,25,598	0/0:41,0:38:35.58:0,36,979	0/1:21,1:21:1.67:620,0,2	0/0:25,0:25:24.08:0,24,863	0/0:33,0:31:81.75:0,82,2120	0/0:19,0:18:12.51:0,13,355	0/0:19,0:18:18.48:0,18,409	0/0:23,0:23:54.18:0,54,2200	0/1:23,0:23:1.42:1,0,364	0/1:34,0:32:8.83:9,0,648	0/0:23,0:23:19.18:0,19,1048	1/1:23,1:22:7.84:625,8,0	0/0:18,0:18:17.93:0,18,425	0/0:27,0:27:48.04:0,48,1387	0/0:16,0:15:12.51:0,13,196	0/0:41,0:39:55.40:0,55,1352	0/0:25,0:24:63.22:0,63,2866	0/0:26,0:26:51.13:0,51,2368	0/0:51,0:51:99:0,135,5901	0/0:17,0:14:8.96:0,9,154	0/0:26,0:23:62.79:0,63,2572	0/0:25,0:25:41.77:0,42,1319	0/0:7,0:6:17.89:0,18,541
chr10	66784661	.	CATACACACAG	C	2671.29	PASS	AB=0.983;AC=13;AF=0.232;AN=56;BaseQRankSum=2.566;DP=741;FS=19.302;HRun=0;HaplotypeScore=208.0828;InbreedingCoeff=0.4979;MQ=53.17;MQ0=10;MQRankSum=-3.532;QD=11.61;ReadPosRankSum=-1.939;VQSLOD=1.0611;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:4,37:41:15.05:462,15,0	1/1:2,8:9:15.04:421,15,0	0/0:27,0:14:28.30:0,28,695	0/0:52,0:27:69.50:0,69,1756	0/1:19,0:21:99:191,0,241	0/0:30,0:28:27.49:0,27,563	0/1:42,0:39:6.82:7,0,799	1/1:5,16:21:34.90:749,35,0	0/0:24,0:24:24.08:0,24,755	0/0:32,0:30:84.25:0,84,1781	0/0:19,0:18:12:0,12,274	0/0:20,0:19:21.04:0,21,399	0/0:23,0:23:57.20:0,57,1952	0/1:21,0:21:22.38:22,0,319	0/1:34,0:32:8.84:9,0,561	0/0:23,0:23:19.18:0,19,884	1/1:14,9:21:25.71:969,26,0	0/0:11,0:12:9.44:0,9,353	0/0:26,0:26:52.79:0,53,1264	0/0:17,0:16:15.52:0,16,245	0/0:41,0:39:54.63:0,55,1178	0/0:25,0:24:63.20:0,63,2413	0/0:26,0:26:54.14:0,54,2120	0/0:51,0:51:99:0,138,5097	0/1:17,0:14:15.93:16,0,111	0/0:29,0:26:71.42:0,71,2264	0/0:26,0:26:44.84:0,45,1114	0/0:8,0:7:20.86:0,21,520
chr10	66784991	.	T	TACACACAC	3631.95	PASS	AB=0.618;AC=39;AF=0.780;AN=50;BaseQRankSum=1.326;DP=655;FS=6.474;HRun=0;HaplotypeScore=169.2185;InbreedingCoeff=0.4974;MQ=55.68;MQ0=14;MQRankSum=-3.111;QD=7.46;ReadPosRankSum=-3.154;VQSLOD=1.6636;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:39,0:38:2.50:9,2,0	./.	./.	./.	0/0:10,0:10:0.44:0,0,1	1/1:20,0:22:20.89:207,21,0	1/1:28,0:28:11.88:143,12,0	1/1:23,0:22:9.58:49,10,0	1/1:7,9:16:3.48:122,3,0	1/1:32,0:32:36.97:437,37,0	1/1:12,0:12:11.99:119,12,0	0/1:8,11:21:0:0,0,0	0/0:27,0:26:0.44:0,0,634	1/1:16,0:28:5.96:46,6,0	1/1:8,13:26:3.01:121,3,0	1/1:11,14:26:2.39:122,2,0	1/1:24,0:23:5.78:32,6,0	1/1:29,0:29:32.27:649,32,0	1/1:25,0:25:31.78:313,32,0	1/1:10,0:9:5.99:48,6,0	1/1:52,0:51:41.23:583,41,0	0/0:19,0:19:19.95:0,20,285	0/0:17,0:17:1.82:0,2,144	0/0:36,0:38:51.94:0,52,1029	1/1:20,0:20:1.10:77,1,0	1/1:18,0:18:29.45:224,29,0	1/1:8,7:20:3.31:143,3,0	1/1:5,0:11:6.02:187,6,0
chr10	66785027	.	CAT	C	1296.75	PASS	AB=0.944;AC=16;AF=0.286;AN=56;BaseQRankSum=7.161;DP=651;FS=25.211;HRun=0;HaplotypeScore=113.7327;InbreedingCoeff=0.3024;MQ=53.11;MQ0=18;MQRankSum=-3.112;QD=4.68;ReadPosRankSum=-4.475;VQSLOD=-0.5925;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:24:29.43:224,29,0	1/1:7,0:7:14.88:110,15,0	0/0:26,0:20:41.40:0,41,435	0/0:30,0:23:65.50:0,65,574	0/0:3,9:12:0.91:0,1,2	0/1:20,0:20:49.87:50,0,211	0/1:19,11:29:7.21:7,0,279	1/1:14,0:11:32.46:229,32,0	0/0:20,0:20:24.82:0,25,194	0/1:20,2:22:99:223,0,116	0/1:14,0:13:23.19:23,0,123	0/0:21,0:20:16.63:0,17,113	0/0:24,0:23:35.32:0,35,812	0/0:27,3:30:10.92:0,11,281	0/0:25,0:25:27.67:0,28,218	0/0:21,0:20:13.52:0,14,106	1/1:20,0:19:47.60:346,48,0	0/1:31,1:32:99:175,0,316	0/0:28,1:27:11.11:0,11,388	0/1:13,1:13:0.11:0,0,132	0/1:63,0:61:63.75:64,0,790	0/0:21,0:21:44.63:0,45,533	0/0:20,0:19:28.70:0,29,301	0/0:35,0:35:97.51:0,98,1261	0/0:25,1:25:4.94:0,5,204	0/1:16,0:16:20.75:21,0,185	0/0:18,0:18:26.27:0,26,195	0/0:16,0:15:29.80:0,30,252
chr10	66786834	.	T	TAAAGA	6774.14	PASS	AB=0.655;AC=22;AF=0.407;AN=54;BaseQRankSum=7.896;DP=169;FS=94.460;HRun=0;HaplotypeScore=118.2730;InbreedingCoeff=0.0773;MQ=53.57;MQ0=2;MQRankSum=-4.658;QD=56.93;ReadPosRankSum=4.246;VQSLOD=1.7475;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:2,0:2:4.76:5,0,61	0/1:1,4:5:36.64:357,0,37	0/0:9,0:5:18.06:0,18,339	0/0:5,0:3:9.03:0,9,187	0/1:10,7:17:99:489,0,154	1/1:0,6:6:18.06:532,18,0	1/1:0,4:4:12.04:324,12,0	0/0:2,0:2:3.01:0,3,52	1/1:0,3:3:9.03:254,9,0	0/1:6,6:12:99:533,0,231	0/1:1,6:7:48.24:461,0,48	1/1:0,3:3:9.03:280,9,0	0/0:5,0:5:15.05:0,15,349	0/1:1,5:7:27:464,0,27	./.	1/1:1,1:1:3.01:93,3,0	0/1:3,2:4:56.02:56,0,104	0/0:2,0:2:3.01:0,3,67	0/0:3,0:2:3.01:0,3,67	0/1:6,7:13:84.20:678,0,84	0/0:2,0:2:3.01:0,3,44	0/0:5,0:5:12.04:0,12,277	0/0:8,0:8:18.06:0,18,419	0/0:4,0:3:6.02:0,6,140	0/1:4,11:15:99:901,0,112	0/1:2,4:5:99:258,0,124	1/1:1,11:12:36.12:1091,36,0	0/0:5,0:5:15.02:0,15,284
chr10	66786841	.	TAA	T	2372.79	PASS	AB=0.628;AC=19;AF=0.339;AN=56;BaseQRankSum=11.418;DP=208;FS=102.153;HRun=3;HaplotypeScore=107.7432;InbreedingCoeff=0.1299;MQ=54.35;MQ0=2;MQRankSum=-5.304;QD=19.14;ReadPosRankSum=6.134;VQSLOD=-0.3753;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:4:9.03:0,9,119	0/1:1,4:5:27.74:154,0,28	0/0:11,0:9:27.64:0,28,338	0/0:5,0:3:12.04:0,12,182	0/1:10,7:17:63.68:64,0,354	1/1:0,6:6:18.05:227,18,0	1/1:0,4:4:12.04:144,12,0	0/0:4,0:4:12.04:0,12,156	0/1:1,3:4:5.82:90,0,6	0/1:7,6:13:99:202,0,157	0/1:2,6:8:38.56:172,0,39	1/1:1,3:4:9.03:128,9,0	0/0:8,0:8:21.04:0,21,259	0/1:3,6:9:58.33:156,0,58	0/0:2,0:2:5.87:0,6,34	1/1:1,1:1:3.01:42,3,0	0/0:6,2:7:3.69:0,4,158	0/0:4,0:4:9.03:0,9,120	0/0:5,0:4:8.94:0,9,85	0/1:7,7:14:91.68:260,0,92	0/0:4,0:4:3.01:0,3,39	0/0:7,0:7:21.06:0,21,261	0/0:10,0:10:29.99:0,30,358	0/0:5,0:4:9.03:0,9,103	0/1:4,11:15:43.29:361,0,43	0/1:6,4:9:94.82:95,0,122	1/1:2,11:13:2.34:449,2,0	0/0:5,0:5:15.05:0,15,195
chr10	66786844	.	AG	A	955.78	PASS	AB=0.938;AC=22;AF=0.393;AN=56;BaseQRankSum=11.352;DP=218;FS=114.944;HRun=2;HaplotypeScore=112.6269;InbreedingCoeff=0.1274;MQ=53.48;MQ0=3;MQRankSum=-5.725;QD=7.08;ReadPosRankSum=4.261;VQSLOD=0.0551;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:3,1:4:9.07:9,0,67	0/1:5,0:5:23.09:57,0,23	0/0:14,0:9:24.51:0,25,223	0/0:5,0:3:12.02:0,12,125	0/1:18,1:19:71.51:72,0,288	1/1:6,0:6:16.31:88,16,0	1/1:4,0:4:11.34:58,11,0	0/0:5,0:5:14.89:0,15,129	1/1:5,0:5:8.83:46,9,0	0/1:11,2:13:98.23:98,0,150	0/1:8,0:8:25.64:68,0,26	0/1:4,0:4:7.12:44,0,7	0/0:8,0:8:21.49:0,21,236	0/1:9,0:9:44.93:72,0,45	1/1:2,0:2:2.13:5,2,0	1/1:1,1:1:2.97:20,3,0	0/0:9,0:8:12.55:0,13,140	0/0:5,0:5:8.65:0,9,104	0/0:5,0:4:5.59:0,6,79	0/1:11,3:14:79.29:146,0,79	0/0:5,0:5:5.95:0,6,58	0/0:7,0:7:21.07:0,21,273	0/0:10,0:10:26.38:0,26,353	0/0:5,0:4:9.03:0,9,115	0/1:14,1:15:44.15:145,0,44	0/1:11,0:10:29.82:30,0,110	1/1:14,0:14:7.57:172,8,0	0/0:5,0:5:15.05:0,15,200
chr10	66787905	.	GAAAAAAGAAAAAA	G	5103.08	PASS	AB=0.983;AC=18;AF=0.333;AN=54;BaseQRankSum=10.798;DP=421;FS=21.813;HRun=0;HaplotypeScore=139.4066;InbreedingCoeff=-0.2728;MQ=46.20;MQ0=20;MQRankSum=-6.797;QD=19.78;ReadPosRankSum=6.440;VQSLOD=2.1342;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:39:58.03:0,58,1236	0/1:3,0:3:0:0,0,0	0/0:13,0:1:3.01:0,3,74	./.	0/0:15,0:15:23.14:0,23,414	0/1:18,0:18:8.67:625,0,9	0/1:17,0:17:48.51:140,0,49	0/0:20,0:18:32.63:0,33,552	0/1:19,1:20:85.94:245,0,86	0/1:15,0:14:49.39:263,0,49	0/1:23,0:23:94.54:366,0,95	0/1:13,0:12:40.40:401,0,40	0/0:9,0:8:17.97:0,18,413	1/1:8,1:9:12.04:330,12,0	0/1:14,0:14:61.14:294,0,61	0/1:6,0:6:9.29:307,0,9	0/0:16,0:15:35.96:0,36,727	0/1:17,0:17:99:149,0,126	0/1:13,1:13:97.51:181,0,98	0/1:20,0:18:54.43:613,0,54	0/1:19,0:18:9.53:10,0,66	0/0:8,0:8:24.05:0,24,734	0/0:10,0:9:20.90:0,21,647	0/0:13,0:13:27.75:0,28,976	0/1:15,2:17:98.84:479,0,99	0/1:13,0:13:63.59:263,0,64	0/1:19,1:19:47.88:438,0,48	0/0:7,0:5:14.87:0,15,112
chr10	66787907	.	AAAAAG	A	965.79	PASS	AB=0.986;AC=18;AF=0.333;AN=54;BaseQRankSum=10.691;DP=427;FS=21.810;HRun=0;HaplotypeScore=101.2953;InbreedingCoeff=-0.3609;MQ=46.14;MQ0=23;MQRankSum=-8.164;QD=3.28;ReadPosRankSum=7.861;VQSLOD=-0.2669;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:30,12:41:30.75:31,0,435	0/0:4,0:4:2.70:0,3,12	0/0:17,0:1:2.96:0,3,19	./.	0/1:15,0:14:22.48:22,0,87	0/1:18,0:18:11.95:134,0,12	0/1:17,0:17:19.93:20,0,49	0/0:17,0:15:12.86:0,13,217	0/1:18,0:18:64.69:65,0,69	0/1:16,0:15:40.72:41,0,72	0/1:22,0:22:72.21:72,0,98	0/1:13,0:12:40.32:102,0,40	0/0:7,0:6:17.98:0,18,173	1/1:9,0:9:11.36:89,11,0	0/1:13,0:13:53.18:53,0,61	0/1:6,0:6:9.31:66,0,9	0/0:17,0:15:20.78:0,21,230	0/1:16,0:16:11.89:12,0,94	0/1:18,0:17:28.90:29,0,144	0/1:21,0:19:69.23:128,0,69	0/0:17,0:16:16.86:0,17,115	0/0:11,0:11:30.33:0,30,266	0/0:11,0:10:6.77:0,7,186	0/0:14,0:13:30.15:0,30,394	0/1:16,0:16:83.63:118,0,84	0/1:14,0:14:42.83:43,0,55	0/1:20,0:19:51.23:99,0,51	0/0:7,0:5:14.93:0,15,115
chr10	66790312	.	AT	A	11370.61	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=20.049;DP=716;FS=6.581;HRun=7;HaplotypeScore=122.2325;InbreedingCoeff=0.9996;MQ=77.60;MQ0=0;MQRankSum=-2.438;QD=25.90;ReadPosRankSum=5.057;VQSLOD=3.7680;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:93.24:0,93,1151	0/0:12,0:12:33.11:0,33,415	0/0:23,0:23:49.04:0,49,603	0/0:18,0:16:33.03:0,33,371	0/0:35,0:35:90.29:0,90,1132	1/1:1,24:25:63.14:643,63,0	1/1:1,28:29:69.16:704,69,0	0/0:24,0:24:60.15:0,60,718	1/1:3,24:27:66.01:667,66,0	1/1:3,28:31:84.19:857,84,0	1/1:2,20:22:57.12:581,57,0	1/1:3,34:37:90.20:918,90,0	0/0:18,0:18:48.12:0,48,567	1/1:1,34:35:96.22:979,96,0	1/1:1,27:28:69.16:704,69,0	1/1:3,17:20:51.11:520,51,0	0/0:32,0:32:93.25:0,93,1138	1/1:2,19:21:38.19:504,38,0	1/1:4,19:23:54.08:537,54,0	1/1:1,31:32:87.19:886,87,0	1/1:2,19:21:48.11:490,48,0	0/0:31,0:31:93.30:0,93,1170	0/0:25,0:25:66.14:0,66,773	0/0:27,0:27:81.26:0,81,1017	1/1:1,27:28:66.15:673,66,0	1/1:1,31:32:90.08:881,90,0	1/1:1,19:20:57.13:582,57,0	1/1:0,8:8:24.05:245,24,0
chr10	66792881	.	A	AT	800.55	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=0.700;DP=544;FS=0.771;HRun=4;HaplotypeScore=49.4941;InbreedingCoeff=0.8331;MQ=68.58;MQ0=0;MQRankSum=-1.876;QD=34.81;ReadPosRankSum=1.648;VQSLOD=4.0119;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:33.09:0,33,374	0/0:5,0:5:15.04:0,15,170	0/0:10,0:10:3.99:0,4,194	0/0:4,0:4:11.95:0,12,109	1/1:0,23:23:69.09:895,69,0	0/0:15,0:15:45.11:0,45,500	0/0:12,0:12:33.09:0,33,374	0/0:36,0:36:99:0,99,1123	0/0:20,0:20:57.16:0,57,647	0/0:41,0:41:99:0,111,1259	0/0:25,0:25:69.10:0,69,743	0/0:17,0:17:48.12:0,48,533	0/0:17,0:17:51.13:0,51,568	0/0:18,0:18:51.14:0,51,579	0/0:19,0:19:48.14:0,48,544	0/0:17,0:17:51.13:0,51,569	0/0:21,0:21:60.17:0,60,680	0/0:19,0:19:57.16:0,57,646	0/0:19,0:19:54.15:0,54,613	0/0:26,0:26:75.17:0,75,836	0/0:13,0:13:36.07:0,36,388	0/0:13,0:13:33.08:0,33,365	0/0:26,0:26:69.10:0,69,736	0/0:10,0:10:30.04:0,30,326	0/0:26,0:26:72.13:0,72,774	0/0:28,0:28:84.21:0,84,934	0/0:38,0:38:99:0,105,1180	0/0:13,0:12:27.08:0,27,306
chr10	66793973	.	GT	G	640.38	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=0.793;DP=625;FS=11.971;HRun=2;HaplotypeScore=168.3777;InbreedingCoeff=0.9879;MQ=80.93;MQ0=0;MQRankSum=-1.317;QD=20.01;ReadPosRankSum=-0.958;VQSLOD=1.9233;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:66.09:0,66,892	0/0:8,0:8:21.04:0,21,290	0/0:26,0:26:72.23:0,72,1083	0/0:18,0:18:51.16:0,51,739	1/1:2,30:31:57.18:735,57,0	0/0:16,0:16:45.10:0,45,628	0/0:20,0:20:60.17:0,60,868	0/0:31,0:31:93.31:0,93,1372	0/0:21,0:21:51.10:0,51,713	0/0:27,0:27:81.23:0,81,1186	0/0:25,0:25:63.17:0,63,912	0/0:16,0:16:35.91:0,36,434	0/0:18,0:18:54.18:0,54,795	0/0:20,0:20:54.09:0,54,735	0/0:20,0:20:57.06:0,57,771	0/0:16,0:16:45.04:0,45,611	0/0:26,0:26:75.09:0,75,1036	0/0:18,0:18:51.17:0,51,763	0/0:17,0:17:48.11:0,48,674	0/0:25,0:25:57.06:0,57,765	0/0:50,0:50:99:0,129,1851	0/0:18,0:18:51.09:0,51,705	0/0:19,0:19:51.09:0,51,713	0/0:25,0:25:63.08:0,63,855	0/0:19,0:19:53.87:0,54,664	0/0:33,0:33:96.22:0,96,1357	0/0:28,0:28:75.25:0,75,1083	0/0:6,0:6:18.06:0,18,269
chr10	66794083	.	TC	T	10301.81	PASS	AB=1.000;AC=53;AF=0.981;AN=54;BaseQRankSum=0.883;DP=386;FS=14.649;HRun=1;HaplotypeScore=265.7928;InbreedingCoeff=0.2907;MQ=38.72;MQ0=0;MQRankSum=-2.852;QD=26.76;ReadPosRankSum=1.640;VQSLOD=1.0155;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:22,1:23:30.60:306,31,0	1/1:4,0:4:10.98:48,11,0	./.	0/1:5,0:5:5.51:6,0,18	1/1:23,1:23:47:243,47,0	1/1:1,14:15:44.81:493,45,0	1/1:1,7:8:24.08:300,24,0	1/1:4,19:18:47.74:539,48,0	1/1:1,12:13:36.12:459,36,0	1/1:1,19:20:57.03:649,57,0	1/1:3,16:19:54:610,54,0	1/1:1,15:16:45.10:553,45,0	1/1:16,0:16:38.22:227,38,0	1/1:1,12:13:38.86:469,39,0	1/1:0,15:15:45.10:553,45,0	1/1:0,14:14:41.97:447,42,0	1/1:3,10:12:34.74:340,35,0	1/1:0,11:11:30.07:363,30,0	1/1:2,7:9:23.95:250,24,0	1/1:1,13:14:42.05:497,42,0	1/1:0,5:5:15.04:178,15,0	1/1:14,1:15:38.33:197,38,0	1/1:6,0:6:16:71,16,0	1/1:9,0:9:12.95:50,13,0	1/1:4,8:12:21.63:366,22,0	1/1:6,20:26:74.82:874,75,0	1/1:2,27:28:83.95:925,84,0	1/1:1,7:8:24.05:288,24,0
chr10	66794286	.	A	ATT	1048.17	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-6.975;DP=464;FS=3.439;HRun=9;HaplotypeScore=91.7020;InbreedingCoeff=0.7992;MQ=66.42;MQ0=0;MQRankSum=-1.015;QD=30.83;ReadPosRankSum=-2.781;VQSLOD=3.3931;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:48.10:0,48,501	0/0:4,0:4:12.03:0,12,128	0/0:10,0:9:9:0,9,94	0/0:10,0:10:14.70:0,15,139	1/1:5,29:33:81.12:1143,81,0	0/0:18,0:17:34.11:0,34,123	0/0:8,0:8:16.09:0,16,72	0/0:31,0:31:74.94:0,75,772	0/0:10,0:10:17.51:0,18,66	0/0:25,0:25:32.65:0,33,159	0/0:15,0:15:27.83:0,28,100	0/0:9,0:9:11.31:0,11,36	0/0:10,0:10:24.05:0,24,255	0/0:11,0:11:20.13:0,20,69	0/0:17,0:17:30.17:0,30,108	0/0:15,0:15:33.98:0,34,121	0/0:21,0:21:42.62:0,43,163	0/0:20,0:20:39.73:0,40,135	0/0:23,0:23:36.43:0,36,186	0/0:23,0:23:28.54:0,29,139	0/0:9,0:9:17.35:0,17,62	0/0:9,0:10:23.78:0,24,235	0/0:22,0:22:57.14:0,57,607	0/0:21,0:21:51.02:0,51,514	0/0:19,0:19:22.74:0,23,78	0/0:22,0:22:39.71:0,40,142	0/0:24,0:24:37.16:0,37,126	0/0:5,0:5:8.88:0,9,30
chr10	66794295	.	T	TA	10350.41	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-12.703;DP=474;FS=1.226;HRun=1;HaplotypeScore=49.5919;InbreedingCoeff=0.9870;MQ=71.86;MQ0=0;MQRankSum=-0.563;QD=33.82;ReadPosRankSum=4.488;VQSLOD=4.4538;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:51.13:0,51,627	0/0:5,0:5:12.04:0,12,154	0/0:12,0:12:17.12:0,17,200	0/0:10,0:9:18.64:0,19,188	0/0:32,0:32:66.43:0,66,302	1/1:1,19:20:45.15:624,45,0	1/1:1,8:9:18.06:250,18,0	0/0:35,0:35:90.19:0,90,1063	1/1:1,9:10:21.07:291,21,0	1/1:2,27:29:75.19:987,75,0	1/1:1,15:16:41.97:534,42,0	1/1:1,8:9:21.07:291,21,0	0/0:9,0:9:24.08:0,24,307	1/1:1,13:14:30.10:416,30,0	1/1:1,16:17:42.14:583,42,0	1/1:0,15:15:45.15:625,45,0	1/1:2,21:22:51.17:708,51,0	1/1:0,19:19:51.17:709,51,0	1/1:1,19:20:51.21:682,51,0	1/1:0,21:21:63.20:857,63,0	1/1:0,8:8:21.07:292,21,0	0/0:9,0:9:26.97:0,27,311	0/0:21,0:21:63.18:0,63,782	0/0:18,0:18:54.01:0,54,623	1/1:0,19:19:48.16:662,48,0	1/1:2,23:25:69.12:885,69,0	1/1:1,24:25:54.18:749,54,0	1/1:0,7:7:15.05:208,15,0
chr10	66795174	.	CT	C	7171.16	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=5.218;DP=496;FS=6.629;HRun=8;HaplotypeScore=52.1727;InbreedingCoeff=0.9826;MQ=72.36;MQ0=1;MQRankSum=-2.143;QD=22.55;ReadPosRankSum=2.810;VQSLOD=5.4240;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:72.22:0,72,870	0/0:8,0:8:24.07:0,24,287	0/0:14,0:12:26.91:0,27,304	0/0:15,0:14:34.25:0,34,358	0/0:2,0:30:77.45:0,77,399	1/1:0,12:12:24.04:232,24,0	1/1:2,17:19:39.06:377,39,0	0/0:25,0:25:66.20:0,66,797	1/1:5,16:21:36.05:348,36,0	1/1:2,23:25:66.07:625,66,0	1/1:1,12:13:33.05:319,33,0	1/1:1,11:12:27.04:261,27,0	0/0:17,0:17:47.88:0,48,555	1/1:1,14:15:36.06:348,36,0	1/1:2,12:14:36.05:348,36,0	1/1:0,16:16:36.06:348,36,0	1/1:4,23:27:57.08:550,57,0	1/1:1,11:12:27.04:261,27,0	1/1:5,17:22:51.08:492,51,0	1/1:2,15:17:39.06:377,39,0	1/1:3,22:25:57.09:551,57,0	0/0:9,0:9:21.06:0,21,253	0/0:16,0:16:39.12:0,39,470	0/0:16,0:16:42.11:0,42,495	1/1:1,21:22:63.10:608,63,0	1/1:1,19:20:57.09:550,57,0	1/1:3,21:24:54.03:521,54,0	1/1:0,2:2:6.01:58,6,0
chr10	66795460	.	G	GA	2091.60	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-10.708;DP=447;FS=12.661;HRun=6;HaplotypeScore=40.4776;InbreedingCoeff=0.9158;MQ=80.22;MQ0=0;MQRankSum=-1.626;QD=30.76;ReadPosRankSum=-3.217;VQSLOD=1.7509;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,26:29:72.23:906,72,0	1/1:1,2:3:6.02:75,6,0	0/0:14,0:14:35.98:0,36,347	0/0:9,0:9:17.05:0,17,153	0/0:23,0:23:57.13:0,57,582	0/0:22,0:22:60.13:0,60,612	0/0:8,0:8:24.05:0,24,245	1/1:3,33:36:99:1245,99,0	0/0:12,0:12:33.07:0,33,337	0/0:28,0:28:75.17:0,75,765	0/0:11,0:11:30.07:0,30,306	0/0:16,0:16:39.09:0,39,397	0/0:16,0:16:39.08:0,39,398	0/0:19,0:19:54.11:0,54,544	0/0:13,0:13:33.06:0,33,330	0/0:9,0:9:27.06:0,27,275	0/0:22,0:22:57.10:0,57,573	0/0:18,0:17:48.09:0,48,482	0/0:18,0:18:36.06:0,36,356	0/0:11,0:11:30.06:0,30,306	0/0:8,0:8:21.05:0,21,214	0/0:5,0:5:6.01:0,6,61	0/0:8,0:8:21.05:0,21,214	0/0:10,0:10:27.06:0,27,275	0/0:18,0:18:42.09:0,42,428	0/0:26,0:26:69.15:0,69,704	0/0:28,0:28:81.17:0,81,820	0/0:7,0:7:21.05:0,21,214
chr10	66795757	.	TAC	T	998.79	PASS	AB=1.000;AC=7;AF=0.140;AN=50;BaseQRankSum=7.924;DP=227;FS=2.361;HRun=0;HaplotypeScore=30.5687;InbreedingCoeff=0.5654;MQ=64.40;MQ0=1;MQRankSum=1.854;QD=27.74;ReadPosRankSum=-2.515;VQSLOD=3.5314;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,2:4:8.98:91,9,0	1/1:1,0:1:2.74:12,3,0	./.	0/0:8,0:4:3:0,3,25	./.	0/0:13,0:13:36.08:0,36,594	0/0:4,0:4:9.03:0,9,173	1/1:3,25:28:81.10:1013,81,0	0/0:9,0:9:13.68:0,14,429	0/0:5,0:5:15.05:0,15,261	0/0:10,0:10:15.48:0,15,302	0/0:4,0:4:12.01:0,12,164	0/0:8,0:8:18.05:0,18,305	0/0:6,0:6:18.02:0,18,236	0/0:5,0:5:1.64:0,2,218	0/0:5,0:5:15.05:0,15,270	0/0:18,0:18:54.15:0,54,950	0/0:12,0:12:9.71:0,10,509	0/0:10,0:9:27.06:0,27,398	0/0:12,0:12:29.57:0,30,486	./.	0/0:3,0:3:9.03:0,9,172	0/1:3,0:3:5.33:5,0,106	0/0:1,0:1:3.01:0,3,58	0/0:8,0:8:11.60:0,12,353	0/0:19,0:19:46.48:0,46,928	0/0:11,0:11:26.87:0,27,484	0/0:12,0:12:33.11:0,33,635
chr10	66795759	.	CAT	C	316.81	PASS	AB=0.881;AC=12;AF=0.231;AN=52;BaseQRankSum=7.352;DP=225;FS=0.834;HRun=0;HaplotypeScore=32.1910;InbreedingCoeff=0.1568;MQ=62.11;MQ0=1;MQRankSum=0.875;QD=3.91;ReadPosRankSum=-2.772;VQSLOD=1.2400;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:4:1.43:19,1,0	1/1:1,0:1:1.25:3,1,0	0/0:3,0:1:2.97:0,3,20	0/0:7,0:3:0:0,0,0	./.	0/0:13,0:13:27.09:0,27,440	0/0:4,0:4:12.04:0,12,194	1/1:27,0:27:49.15:329,49,0	0/1:8,1:9:10.09:10,0,366	0/0:6,0:6:15.05:0,15,245	0/1:10,1:11:19.12:19,0,216	0/0:4,0:4:6.02:0,6,94	0/0:7,0:7:15.05:0,15,243	0/0:5,0:5:9.01:0,9,121	0/1:4,1:5:22.13:22,0,182	0/0:5,0:5:15.05:0,15,246	0/0:18,0:18:48.16:0,48,780	0/1:13,0:13:6.90:7,0,406	0/0:10,0:9:15.05:0,15,243	0/0:11,0:12:12.96:0,13,380	./.	0/0:3,0:3:9.03:0,9,148	0/1:2,1:3:28.14:28,0,89	0/0:1,0:1:3.01:0,3,49	0/1:7,1:8:16.12:16,0,274	0/0:18,1:19:10.96:0,11,695	0/0:10,0:10:24.08:0,24,372	0/0:12,0:12:33.11:0,33,541
chr10	66796221	.	T	TCA	6483.61	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-9.911;DP=672;FS=2.752;HRun=0;HaplotypeScore=77.6357;InbreedingCoeff=0.9955;MQ=95.11;MQ0=0;MQRankSum=-5.744;QD=55.42;ReadPosRankSum=0.564;VQSLOD=5.2719;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,43:44:99:2253,111,0	1/1:0,11:11:33.11:670,33,0	0/0:35,0:36:94.40:0,94,1510	0/0:31,0:32:83.41:0,83,1179	1/1:0,22:22:66.18:1299,66,0	0/0:21,0:21:60.19:0,60,954	0/0:19,0:19:54.17:0,54,854	1/1:0,38:40:99:2261,117,0	0/0:29,0:29:84.25:0,84,1294	0/0:30,0:30:87.28:0,87,1355	0/0:17,0:17:48.16:0,48,774	0/0:24,0:24:72.21:0,72,1101	0/0:21,0:21:63.20:0,63,1001	0/0:16,0:16:48.15:0,48,759	0/0:13,0:13:39.13:0,39,634	0/0:26,0:26:78.21:0,78,1174	0/0:19,0:19:57.19:0,57,927	0/0:20,0:20:60.20:0,60,970	0/0:23,0:23:69.18:0,69,1032	0/0:25,0:25:75.26:0,75,1208	0/0:31,0:31:93.29:0,93,1465	0/0:31,0:31:90.25:0,90,1393	0/0:21,0:21:63.20:0,63,997	0/0:25,0:25:75.26:0,75,1218	0/0:18,0:18:54.18:0,54,878	0/0:27,0:27:78.27:0,78,1270	0/0:26,0:26:78.21:0,78,1190	0/0:5,0:5:15.05:0,15,244
chr10	66797022	.	ATG	A	154.40	PASS	AB=0.932;AC=10;AF=0.200;AN=50;BaseQRankSum=3.136;DP=392;FS=0.000;HRun=0;HaplotypeScore=51.2908;InbreedingCoeff=-0.0977;MQ=66.85;MQ0=2;MQRankSum=-0.383;QD=1.19;ReadPosRankSum=0.163;VQSLOD=0.8275;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:12.04:0,12,168	0/1:6,0:6:5.08:5,0,80	./.	./.	0/0:15,0:18:5.90:0,6,41	0/0:17,0:17:11.93:0,12,149	0/0:11,0:11:15.05:0,15,218	./.	0/0:8,0:8:6.02:0,6,88	0/0:16,0:16:9.03:0,9,130	0/0:15,0:15:2.99:0,3,23	0/0:8,0:8:9.03:0,9,134	0/0:12,0:12:12.04:0,12,171	1/1:3,8:12:8.85:79,9,0	0/1:13,1:14:17.56:18,0,159	0/0:11,0:11:9.03:0,9,127	0/0:26,0:26:33.06:0,33,458	0/1:13,2:15:42.36:42,0,205	0/0:16,0:16:6.02:0,6,89	0/0:11,0:11:9.03:0,9,129	0/1:13,0:13:23.51:24,0,53	0/0:6,0:6:15.05:0,15,223	0/1:17,1:17:17.39:17,0,159	0/0:8,0:8:12.04:0,12,179	0/1:13,3:17:35.17:35,0,309	0/1:22,1:24:22.21:22,0,229	0/1:10,1:11:47.10:47,0,160	0/0:4,0:5:6.01:0,6,71
chr10	66797409	.	TG	T	1980.17	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=10.824;DP=617;FS=0.517;HRun=1;HaplotypeScore=76.3895;InbreedingCoeff=0.9783;MQ=92.12;MQ0=0;MQRankSum=-6.577;QD=30.94;ReadPosRankSum=-0.119;VQSLOD=3.2190;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,29:32:75.24:972,75,0	1/1:0,13:13:36.12:466,36,0	0/0:27,0:27:78.21:0,78,1154	0/0:25,0:25:69.16:0,69,1011	0/0:22,0:22:57.18:0,57,872	0/0:23,0:23:69.20:0,69,1049	0/0:29,0:29:87.28:0,87,1368	1/1:4,15:19:54.17:685,54,0	0/0:26,0:26:78.27:0,78,1240	0/0:29,0:29:84.28:0,84,1318	0/0:16,0:16:45.14:0,45,692	0/0:22,0:22:66.23:0,66,1055	0/0:31,0:31:90.31:0,90,1439	0/0:20,0:20:60.18:0,60,930	0/0:33,0:33:99:0,99,1526	0/0:25,0:25:75.26:0,75,1199	0/0:19,0:19:57.19:0,57,907	0/0:17,0:17:48.16:0,48,756	0/0:14,0:14:42.08:0,42,585	0/0:5,0:5:12.02:0,12,167	0/0:24,0:24:68.69:0,69,1014	0/0:18,0:18:51.14:0,51,744	0/0:22,0:22:63.16:0,63,911	0/0:24,0:24:72.20:0,72,1123	0/0:29,0:29:84.24:0,84,1268	0/0:19,0:19:57.19:0,57,904	0/0:30,0:30:87.27:0,87,1335	0/0:4,0:4:12.04:0,12,186
chr10	66797453	.	CT	C	2565.50	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.313;DP=570;FS=0.000;HRun=3;HaplotypeScore=67.1852;InbreedingCoeff=0.9405;MQ=89.77;MQ0=0;MQRankSum=-6.315;QD=31.29;ReadPosRankSum=-2.620;VQSLOD=2.4511;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,27:31:78.19:935,78,0	1/1:0,13:13:39.12:483,39,0	0/0:16,0:16:45.14:0,45,620	0/0:33,0:32:86.06:0,86,1082	0/0:20,0:20:57.06:0,57,771	0/0:12,0:12:36.12:0,36,517	0/0:21,0:21:63.17:0,63,851	1/1:3,35:38:99:1291,105,0	0/0:21,0:21:57.17:0,57,787	0/0:25,0:25:69.23:0,69,993	0/0:13,0:13:39.08:0,39,521	0/0:19,0:19:54.17:0,54,761	0/0:27,0:27:72.23:0,72,1018	0/0:22,0:22:66.19:0,66,898	0/0:28,0:28:78.24:0,78,1087	0/0:17,0:17:45.14:0,45,630	0/0:16,0:16:48.15:0,48,672	0/0:13,0:13:39.13:0,39,562	0/0:14,0:14:39.07:0,39,518	0/0:16,0:16:48.15:0,48,673	0/0:22,0:22:63.21:0,63,906	0/0:16,0:16:45.14:0,45,631	0/0:17,0:17:48.15:0,48,672	0/0:23,0:23:60.20:0,60,864	0/0:19,0:19:54.17:0,54,755	0/0:26,0:26:78.25:0,78,1086	0/0:31,0:31:84.27:0,84,1189	0/0:1,0:1:3.01:0,3,43
chr10	66797712	.	TTTTC	T	4176.74	PASS	AB=1.000;AC=37;AF=0.661;AN=56;BaseQRankSum=-0.960;DP=363;FS=43.947;HRun=0;HaplotypeScore=68.8468;InbreedingCoeff=0.8007;MQ=76.69;MQ0=10;MQRankSum=-5.862;QD=21.87;ReadPosRankSum=1.189;VQSLOD=1.0517;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:54.16:0,54,851	0/0:7,0:7:18.05:0,18,277	0/0:45,0:16:27.24:0,27,254	0/1:52,0:22:2.56:3,0,357	0/0:23,0:23:69.07:0,69,1168	1/1:3,7:10:18.02:292,18,0	1/1:0,4:4:9.03:163,9,0	0/0:28,0:28:55.02:0,55,1131	1/1:1,8:9:21.07:376,21,0	1/1:2,8:10:18.06:324,18,0	1/1:0,8:8:9.03:161,9,0	1/1:0,7:7:12.01:184,12,0	0/0:12,0:12:36.12:0,36,873	1/1:1,10:11:24.04:400,24,0	1/1:1,3:4:6.02:109,6,0	1/1:2,4:6:6.02:109,6,0	1/1:1,9:10:9.03:163,9,0	1/1:0,7:7:6.02:109,6,0	1/1:3,9:12:27.09:414,27,0	1/1:3,6:9:18.06:320,18,0	1/1:4,0:4:8.99:92,9,0	0/0:7,0:7:18.06:0,18,438	0/0:22,0:22:54.17:0,54,1266	0/0:3,0:3:3.01:0,3,77	1/1:1,11:12:24.08:435,24,0	1/1:0,2:2:6.02:91,6,0	1/1:1,7:8:18.06:322,18,0	1/1:1,3:4:6.02:109,6,0
chr10	66797734	.	TTTA	T	2306.19	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-3.433;DP=329;FS=19.468;HRun=0;HaplotypeScore=65.4278;InbreedingCoeff=0.7606;MQ=74.83;MQ0=13;MQRankSum=4.227;QD=34.42;ReadPosRankSum=1.623;VQSLOD=2.4477;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,16:16:33.11:546,33,0	1/1:0,3:3:9.03:148,9,0	0/0:63,0:16:10.85:0,11,230	0/0:60,0:25:15.67:0,16,380	1/1:0,21:21:50.77:755,51,0	0/0:9,0:9:23.97:0,24,364	0/0:4,0:4:12.04:0,12,209	1/1:1,26:27:61.91:1011,62,0	0/0:9,0:9:22.90:0,23,299	0/0:9,0:9:22.83:0,23,329	0/0:3,0:3:5.97:0,6,53	0/0:5,0:5:15.05:0,15,226	0/0:11,0:11:33.10:0,33,673	0/0:8,0:8:24.08:0,24,380	0/0:3,0:3:9.03:0,9,165	0/0:2,0:2:6.02:0,6,79	0/0:7,0:7:12:0,12,164	0/0:4,0:4:6.01:0,6,78	0/0:8,0:8:16.91:0,17,214	0/0:5,0:5:12.13:0,12,128	0/0:3,0:3:8.99:0,9,147	0/0:6,0:6:15.05:0,15,325	0/0:21,0:21:57.18:0,57,1213	0/0:3,0:3:9.02:0,9,161	0/0:9,0:9:24.01:0,24,332	0/0:1,0:1:3.01:0,3,47	0/0:5,0:5:13.59:0,14,172	0/0:3,0:3:8.89:0,9,100
chr10	66798286	.	AGG	A	767.49	PASS	AC=2;AF=0.037;AN=54;BaseQRankSum=6.955;DP=750;FS=0.000;HRun=2;HaplotypeScore=81.4838;InbreedingCoeff=0.8500;MQ=53.27;MQ0=10;MQRankSum=2.056;QD=23.26;ReadPosRankSum=1.335;VQSLOD=1.9692;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:43:99:0,114,2224	0/0:12,0:12:30.10:0,30,608	./.	0/0:5,0:1:3.01:0,3,58	1/1:8,25:29:57.19:862,57,0	0/0:40,0:40:99:0,102,2043	0/0:27,0:26:63.22:0,63,1279	0/0:28,0:25:72.24:0,72,1366	0/0:34,0:34:78.23:0,78,1507	0/0:37,0:36:84.29:0,84,1644	0/0:16,0:16:39.13:0,39,779	0/0:26,0:26:60.20:0,60,1143	0/0:36,0:36:90.31:0,90,1829	0/0:29,0:28:84.25:0,84,1657	0/0:25,0:25:69.24:0,69,1383	0/0:27,0:27:69.24:0,69,1402	0/0:27,0:27:81.28:0,81,1626	0/0:20,0:20:51.08:0,51,939	0/0:19,0:13:36.12:0,36,729	0/0:35,0:35:81.28:0,81,1625	0/0:26,0:26:72.25:0,72,1432	0/0:40,0:36:93.32:0,93,1825	0/0:23,0:21:54.17:0,54,1048	0/0:29,0:29:78.27:0,78,1585	0/0:21,0:21:57.20:0,57,1144	0/0:33,0:29:75.26:0,75,1518	0/0:41,0:41:93.32:0,93,1876	0/0:11,0:11:33.11:0,33,669
chr10	66799791	.	C	CTGT	183.30	PASS	AB=0.895;AC=3;AF=0.056;AN=54;BaseQRankSum=4.032;DP=792;FS=18.425;HRun=0;HaplotypeScore=132.7258;InbreedingCoeff=0.7596;MQ=58.90;MQ0=11;MQRankSum=-3.917;QD=7.33;ReadPosRankSum=-1.137;VQSLOD=1.6843;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:2,0:2:0:0,0,0	./.	0/0:26,0:13:34.67:0,35,543	0/0:35,0:21:58.78:0,59,795	0/1:15,1:17:0.10:1,0,0	0/0:22,0:22:63.20:0,63,1009	0/0:42,0:42:99:0,117,1891	1/1:1,7:5:6.72:264,7,0	0/0:42,0:42:99:0,123,2022	0/0:40,0:39:93.30:0,93,1522	0/0:17,0:17:43.39:0,43,684	0/0:39,0:39:99:0,114,1888	0/0:34,0:34:93.32:0,93,1547	0/0:39,0:38:99:0,111,1835	0/0:33,0:33:90.31:0,90,1486	0/0:26,0:26:78.27:0,78,1292	0/0:39,0:39:99:0,111,1840	0/0:20,0:20:60.20:0,60,988	0/0:16,0:13:36.12:0,36,579	0/0:34,0:34:87.27:0,87,1397	0/0:70,1:69:99:0,161,2761	0/0:32,0:32:93.32:0,93,1545	0/0:18,0:18:51.17:0,51,850	0/0:46,0:46:99:0,126,2073	0/0:24,0:23:66.23:0,66,1096	0/0:29,0:29:69.23:0,69,1125	0/0:24,0:24:63.18:0,63,997	0/0:16,0:16:48.16:0,48,795
chr10	66799835	.	T	TGTC	96.04	PASS	AC=4;AF=0.074;AN=54;BaseQRankSum=4.676;DP=845;FS=25.530;HRun=0;HaplotypeScore=187.8368;InbreedingCoeff=0.8340;MQ=61.67;MQ0=1;MQRankSum=-1.972;QD=24.01;ReadPosRankSum=-3.722;VQSLOD=1.3779;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,0:2:3.01:54,3,0	./.	0/0:26,0:18:47.33:0,47,823	0/0:50,0:42:66.67:0,67,1461	0/0:19,0:18:22.17:0,22,279	0/0:19,0:19:57.14:0,57,966	0/0:39,0:39:99:0,114,2032	1/1:0,2:2:6.02:140,6,0	0/0:42,0:42:99:0,123,2178	0/0:52,0:51:99:0,153,2752	0/0:16,0:16:45.15:0,45,831	0/0:41,0:41:99:0,120,2078	0/0:38,0:38:99:0,111,1987	0/0:45,0:45:99:0,129,2257	0/0:37,1:38:81.18:0,81,1774	0/0:32,0:32:90.29:0,90,1614	0/0:32,0:32:84.23:0,84,1478	0/0:16,0:16:48.16:0,48,865	0/0:27,0:25:69.17:0,69,1243	0/0:38,0:38:99:0,104,1884	0/0:86,1:85:99:0,156,3676	0/0:23,0:23:66.20:0,66,1143	0/0:25,0:25:63.21:0,63,1137	0/0:39,0:39:99:0,117,2094	0/0:23,0:23:69.23:0,69,1248	0/0:36,0:36:99:0,108,1850	0/0:22,0:22:60.11:0,60,998	0/0:16,0:16:45.15:0,45,829
chr10	66799947	.	CTGT	C	120.56	PASS	AB=0.962;AC=5;AF=0.089;AN=56;BaseQRankSum=5.802;DP=831;FS=2.294;HRun=0;HaplotypeScore=193.5529;InbreedingCoeff=0.6378;MQ=58.82;MQ0=19;MQRankSum=-2.912;QD=1.91;ReadPosRankSum=-2.304;VQSLOD=2.4737;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,5:9:15.31:130,15,0	1/1:2,1:3:7.06:50,7,0	0/0:42,0:12:6.80:0,7,408	0/1:48,1:20:58.69:59,0,659	0/0:15,0:13:7.27:0,7,140	0/0:18,0:18:45.09:0,45,927	0/0:31,0:30:75.12:0,75,1510	0/0:2,0:2:6.02:0,6,134	0/0:46,0:46:89.73:0,90,1851	0/0:28,0:27:75.26:0,75,1699	0/0:10,0:10:14.98:0,15,249	0/0:50,0:50:90.10:0,90,2006	0/0:40,0:40:99:0,114,2555	0/0:40,0:40:78.24:0,78,1664	0/0:48,0:48:93.30:0,93,2025	0/0:36,0:36:77.88:0,78,1668	0/0:20,0:20:33.11:0,33,745	0/0:9,0:9:24.08:0,24,544	0/0:23,0:14:39.13:0,39,857	0/0:19,0:18:48.11:0,48,995	0/0:93,1:93:97.23:0,97,2946	0/0:28,0:27:72.23:0,72,1571	0/0:20,0:20:48.16:0,48,1068	0/0:48,0:48:99:0,141,3137	0/0:23,0:23:39.13:0,39,882	0/0:38,0:35:99:0,99,2117	0/0:27,0:27:57.16:0,57,1177	0/0:13,0:13:39.12:0,39,834
chr10	66799955	.	CACCACTG	C	103.05	PASS	AB=0.917;AC=4;AF=0.071;AN=56;BaseQRankSum=5.169;DP=849;FS=28.547;HRun=0;HaplotypeScore=249.7312;InbreedingCoeff=0.3923;MQ=58.23;MQ0=16;MQRankSum=-3.915;QD=3.82;ReadPosRankSum=-2.534;VQSLOD=1.0042;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:12,3:14:26.88:137,0,27	1/1:2,1:3:7.54:61,8,0	0/0:47,0:17:44.92:0,45,761	0/0:48,0:18:36.22:0,36,1020	0/0:13,0:12:5.88:0,6,229	0/0:22,0:22:46.04:0,46,1429	0/0:29,0:28:69.23:0,69,2601	0/1:9,0:6:5.81:6,0,73	0/0:49,0:49:96.26:0,96,2776	0/0:29,0:28:81.28:0,81,2904	0/0:9,0:9:11.60:0,12,463	0/0:49,0:49:94.57:0,95,3244	0/0:40,0:40:99:0,120,4437	0/0:37,0:37:71.48:0,71,2518	0/0:47,0:47:93.32:0,93,3285	0/0:34,0:34:75.19:0,75,2536	0/0:22,0:22:36.10:0,36,1156	0/0:8,0:8:24.08:0,24,900	0/0:22,0:15:42.14:0,42,1418	0/0:19,0:18:45.12:0,45,1452	0/0:99,0:99:99:0,138,4325	0/0:28,0:27:75.26:0,75,2955	0/0:18,0:18:48.16:0,48,1554	0/0:48,0:48:99:0,144,5494	0/0:23,0:23:42.14:0,42,1454	0/0:39,0:36:99:0,102,3671	0/0:31,0:31:65.44:0,65,2018	0/0:11,0:11:33.11:0,33,1289
chr10	66799962	.	G	GTCC	366.16	PASS	AB=0.625;AC=5;AF=0.089;AN=56;BaseQRankSum=4.923;DP=818;FS=15.684;HRun=0;HaplotypeScore=195.9370;InbreedingCoeff=0.6486;MQ=60.62;MQ0=14;MQRankSum=-4.380;QD=12.21;ReadPosRankSum=-0.256;VQSLOD=2.3354;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,3:16:9.40:308,9,0	1/1:2,1:3:6.02:113,6,0	0/0:49,0:22:53.41:0,53,695	0/0:50,0:20:33.36:0,33,701	0/0:12,0:11:5.36:0,5,104	0/0:20,0:20:34:0,34,567	0/0:29,0:28:69.09:0,69,1180	0/1:4,6:6:52.53:59,0,53	0/0:44,0:44:81.20:0,81,1190	0/0:26,0:26:75.20:0,75,1240	0/0:7,0:7:12.04:0,12,212	0/0:47,0:47:82.39:0,82,1322	0/0:38,0:38:99:0,105,1777	0/0:39,0:39:63.33:0,63,1040	0/0:43,0:43:75.24:0,75,1289	0/0:32,0:32:66.20:0,66,1132	0/0:20,0:20:30.10:0,30,509	0/0:7,0:7:21.07:0,21,370	0/0:20,0:14:39.13:0,39,680	0/0:20,0:19:39.07:0,39,575	0/0:92,0:92:98.85:0,99,1629	0/0:29,0:28:72.25:0,72,1260	0/0:15,0:15:36.10:0,36,575	0/0:43,0:43:99:0,129,2207	0/0:24,0:24:39.07:0,39,609	0/0:40,0:37:99:0,99,1641	0/0:29,0:29:55.75:0,56,918	0/0:11,0:11:33.11:0,33,582
chr10	66799983	.	TCCAGCAC	T	504.60	PASS	AB=0.959;AC=11;AF=0.196;AN=56;BaseQRankSum=10.474;DP=791;FS=4.416;HRun=0;HaplotypeScore=211.5008;InbreedingCoeff=-0.2716;MQ=65.81;MQ0=11;MQRankSum=-7.002;QD=1.41;ReadPosRankSum=6.320;VQSLOD=2.2591;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:12,8:19:87.16:187,0,87	0/1:4,1:5:42.02:65,0,42	0/0:51,0:29:70.09:0,70,1064	0/0:47,0:24:7.77:0,8,725	0/0:10,0:10:5.60:0,6,124	0/1:12,0:12:51.16:51,0,163	0/0:25,0:25:29.25:0,29,774	0/0:18,0:13:22.95:0,23,383	0/1:37,0:37:99:134,0,320	0/0:26,0:26:60.86:0,61,1138	0/0:7,0:7:9.03:0,9,159	0/1:44,0:44:30.98:31,0,852	0/0:31,0:31:93.32:0,93,3479	0/1:36,0:36:35.32:35,0,691	0/0:41,0:41:13.18:0,13,720	0/1:39,0:39:36.79:37,0,658	0/1:22,0:22:23.69:24,0,455	0/0:9,0:9:3.22:0,3,281	0/0:21,0:20:2.80:0,3,618	0/0:18,0:18:30.83:0,31,432	0/1:94,0:94:10.78:11,0,1135	0/0:21,0:21:60.21:0,60,1841	0/0:10,0:10:15.05:0,15,444	0/0:45,0:45:99:0,135,4270	0/1:22,0:21:6.25:6,0,280	0/0:44,0:40:70.36:0,70,1353	0/1:27,0:27:66.71:67,0,437	0/0:8,0:8:18.01:0,18,277
chr10	66799987	.	GCACTGTCCAC	G	7680.50	PASS	AB=0.868;AC=35;AF=0.625;AN=56;BaseQRankSum=2.835;DP=786;FS=2.146;HRun=0;HaplotypeScore=213.8404;InbreedingCoeff=0.6170;MQ=66.84;MQ0=12;MQRankSum=-1.032;QD=13.00;ReadPosRankSum=1.307;VQSLOD=3.8186;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:20,0:19:6.98:7,0,64	0/0:5,0:5:9.60:0,10,115	0/1:50,0:30:7.07:7,0,256	0/0:45,0:26:0.87:0,1,136	0/0:11,0:11:5.84:0,6,97	1/1:2,10:12:12.04:307,12,0	1/1:27,0:27:44.24:820,44,0	0/0:18,0:13:9.02:0,9,63	1/1:8,30:38:30.10:833,30,0	1/1:11,16:26:27.06:651,27,0	0/0:1,6:7:0:0,0,1	1/1:13,30:43:23.29:525,23,0	0/0:32,0:32:87.30:0,87,2678	1/1:10,26:36:18.04:457,18,0	1/1:8,26:34:6.02:161,6,0	1/1:9,29:38:15.05:408,15,0	0/1:8,15:23:49.76:83,0,50	1/1:8,0:8:15.05:335,15,0	1/1:5,14:18:42.06:657,42,0	1/1:3,16:19:24.01:362,24,0	1/1:31,63:94:2.92:74,3,0	0/0:23,0:23:45.11:0,45,929	0/0:9,0:9:11.99:0,12,198	0/0:43,0:43:81.28:0,81,2480	1/1:5,17:21:3.01:92,3,0	1/1:16,27:40:65.95:1022,66,0	1/1:7,22:29:23.67:566,24,0	1/1:8,0:8:21.02:315,21,0
chr10	66800000	.	C	CTGT	669.81	PASS	AB=0.873;AC=6;AF=0.107;AN=56;BaseQRankSum=4.997;DP=721;FS=12.272;HRun=0;HaplotypeScore=162.5013;InbreedingCoeff=-0.0034;MQ=65.85;MQ0=12;MQRankSum=-5.201;QD=4.47;ReadPosRankSum=-1.144;VQSLOD=1.2565;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:17,6:22:61.83:229,0,62	0/1:3,3:6:99:123,0,119	0/0:44,0:24:54.70:0,55,761	0/0:50,0:29:21.19:0,21,622	0/0:24,0:22:5.66:0,6,99	0/0:12,0:12:11.98:0,12,120	0/0:27,0:27:67.11:0,67,1071	0/1:10,4:11:14.77:307,0,15	0/0:37,0:37:32.94:0,33,338	0/0:20,0:19:54.13:0,54,774	0/1:7,0:7:0:0,0,0	0/0:37,0:37:29.53:0,30,365	0/0:34,0:34:93.30:0,93,1514	0/0:29,0:29:20.69:0,21,222	0/0:33,0:33:11.98:0,12,115	0/0:33,0:33:20.63:0,21,199	0/1:21,0:21:79.35:119,0,79	0/0:7,0:7:18.06:0,18,280	0/0:15,0:14:42.04:0,42,572	0/0:18,0:18:27.06:0,27,412	0/1:79,0:79:1.45:1,0,96	0/0:18,0:18:51.17:0,51,847	0/0:10,0:10:18.06:0,18,300	0/0:34,0:34:99:0,99,1593	0/0:19,0:18:2.98:0,3,22	0/0:34,0:32:75.18:0,75,1149	0/0:25,0:25:26.71:0,27,294	0/0:10,0:10:27.09:0,27,426
chr10	66800332	.	CCT	C	217.84	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.293;DP=770;FS=3.772;HRun=0;HaplotypeScore=99.4910;InbreedingCoeff=0.9687;MQ=56.51;MQ0=10;MQRankSum=-4.047;QD=9.90;ReadPosRankSum=-2.812;VQSLOD=2.9657;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,99,1970	0/0:13,0:13:36.11:0,36,669	0/0:33,0:11:30.09:0,30,537	0/0:23,0:14:27.02:0,27,493	1/1:2,20:19:41.65:313,42,0	0/0:23,0:23:69.24:0,69,1401	0/0:22,0:22:66.23:0,66,1310	0/0:24,0:20:57.20:0,57,1120	0/0:18,0:18:54.18:0,54,1047	0/0:36,0:36:99:0,105,2117	0/0:18,0:18:54.18:0,54,1049	0/0:19,0:19:57.20:0,57,1140	0/0:26,0:26:78.26:0,78,1522	0/0:32,0:32:96.33:0,96,1950	0/0:25,0:25:66.23:0,66,1339	0/0:30,0:30:87.30:0,87,1722	0/0:41,0:40:99:0,120,2421	0/0:32,0:32:91.19:0,91,1812	0/0:30,0:15:42.14:0,42,851	0/0:20,0:20:57.18:0,57,1099	0/0:67,0:66:99:0,192,3861	0/0:29,0:29:87.30:0,87,1767	0/0:22,0:22:66.18:0,66,1282	0/0:38,0:38:99:0,111,2199	0/0:29,0:29:87.28:0,87,1666	0/0:29,0:29:87.30:0,87,1739	0/0:30,0:30:90.31:0,90,1806	0/0:4,0:4:12.04:0,12,244
chr10	66800336	.	G	GT	181.42	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.510;DP=761;FS=6.905;HRun=2;HaplotypeScore=85.8968;InbreedingCoeff=0.9676;MQ=56.65;MQ0=10;MQRankSum=-4.190;QD=8.25;ReadPosRankSum=-3.590;VQSLOD=-0.4216;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,99,1326	0/0:13,0:13:36.12:0,36,500	0/0:32,0:10:30.04:0,30,344	0/0:19,0:10:23.90:0,24,285	1/1:2,20:19:38.88:276,39,0	0/0:22,0:22:66.21:0,66,904	0/0:24,0:24:72.22:0,72,969	0/0:23,0:17:48.11:0,48,629	0/0:18,0:18:51.17:0,51,713	0/0:34,0:34:99:0,102,1410	0/0:19,0:19:52.40:0,52,693	0/0:18,0:18:54.16:0,54,721	0/0:26,0:26:75.24:0,75,1031	0/0:32,0:32:96.30:0,96,1308	0/0:23,0:23:60.18:0,60,807	0/0:28,0:28:81.26:0,81,1132	0/0:43,0:42:99:0,114,1628	0/0:33,0:33:96.17:0,96,1260	0/0:29,0:14:39.13:0,39,543	0/0:21,0:21:54.18:0,54,748	0/0:70,0:69:99:0,196,2707	0/0:29,0:29:87.27:0,87,1183	0/0:23,0:23:69.19:0,69,901	0/0:37,0:37:99:0,108,1471	0/0:26,0:26:75.24:0,75,1032	0/0:27,0:27:81.19:0,81,1061	0/0:29,0:29:84.27:0,84,1158	0/0:4,0:4:12.04:0,12,168
chr10	66800383	.	T	TCAGTTC	116.46	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.409;DP=705;FS=2.258;HRun=0;HaplotypeScore=149.6496;InbreedingCoeff=0.9355;MQ=58.20;MQ0=6;MQRankSum=-2.879;QD=6.47;ReadPosRankSum=-2.138;VQSLOD=2.5257;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:30:78.27:0,78,1893	0/0:12,0:11:27.09:0,27,651	0/0:25,0:11:30.10:0,30,657	0/0:21,0:10:27.09:0,27,628	1/1:6,11:13:9.03:200,9,0	0/0:16,0:16:48.16:0,48,1132	0/0:28,0:28:78.24:0,78,1714	0/0:27,0:19:54.19:0,54,1327	0/0:16,0:16:48.13:0,48,1083	0/0:29,0:29:87.29:0,87,2038	0/0:19,0:19:57.18:0,57,1353	0/0:27,0:27:81.24:0,81,1865	0/0:30,0:30:87.28:0,87,2067	0/0:25,0:25:75.26:0,75,1847	0/0:26,0:26:72.25:0,72,1773	0/0:24,0:24:69.71:0,70,1698	0/0:35,0:35:99:0,102,2452	0/0:23,0:23:60.21:0,60,1428	0/0:24,0:20:60.20:0,60,1421	0/0:15,0:15:42.12:0,42,937	0/0:80,0:80:99:0,223,5231	0/0:18,0:18:54.16:0,54,1229	0/0:20,0:20:60.18:0,60,1323	0/0:26,0:26:78.27:0,78,1856	0/0:21,0:21:60.21:0,60,1447	0/0:31,0:31:90.31:0,90,2189	0/0:29,0:28:84.29:0,84,1971	0/0:9,0:9:27.09:0,27,665
chr10	66800474	.	ACTGTACCT	A	1935.52	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.412;DP=706;FS=12.902;HRun=0;HaplotypeScore=159.3815;InbreedingCoeff=0.9744;MQ=55.56;MQ0=10;MQRankSum=-8.368;QD=40.32;ReadPosRankSum=0.145;VQSLOD=2.5935;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,23:22:36.12:1003,36,0	1/1:1,11:11:21.07:566,21,0	0/0:38,0:13:32.20:0,32,1085	0/0:35,0:6:18.06:0,18,798	0/0:29,0:27:51.04:0,51,1438	0/0:21,0:21:63.11:0,63,2343	0/0:34,0:34:99:0,99,3190	1/1:0,13:8:24.02:508,24,0	0/0:25,0:25:72.25:0,72,2959	0/0:29,0:28:81.25:0,81,3469	0/0:23,0:23:60.16:0,60,2364	0/0:18,0:18:48.12:0,48,1768	0/0:32,0:32:87.11:0,87,3581	0/0:25,0:25:75.26:0,75,3144	0/0:18,0:18:51.18:0,51,2157	0/0:23,0:23:69.24:0,69,2807	0/0:36,0:36:93.30:0,93,3841	0/0:28,0:28:81.26:0,81,3248	0/0:20,0:15:39.13:0,39,1656	0/0:31,0:31:87.30:0,87,3843	0/0:51,0:50:99:0,135,5075	0/0:22,0:22:57.20:0,57,2526	0/0:20,0:20:48.14:0,48,1945	0/0:21,0:21:60.15:0,60,2358	0/0:23,0:23:60.19:0,60,2457	0/0:27,0:27:72.25:0,72,3104	0/0:24,0:24:69.22:0,69,2896	0/0:5,0:5:9.03:0,9,399
chr10	66800697	.	G	GA	1851.44	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-8.471;DP=583;FS=7.558;HRun=8;HaplotypeScore=57.2260;InbreedingCoeff=0.9154;MQ=69.11;MQ0=0;MQRankSum=1.374;QD=26.45;ReadPosRankSum=-1.756;VQSLOD=3.6811;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,27:28:75.22:866,75,0	1/1:0,10:9:27.05:298,27,0	0/0:11,0:11:9.53:0,10,158	0/0:4,0:4:2.56:0,3,15	0/0:24,0:24:48.01:0,48,439	0/0:26,0:26:72.03:0,72,659	0/0:14,0:15:38.05:0,38,335	1/1:8,24:32:72.21:830,72,0	0/0:30,0:30:90.05:0,90,824	0/0:20,0:20:51.02:0,51,467	0/0:19,0:19:54.02:0,54,490	0/0:15,0:15:45.02:0,45,412	0/0:25,1:26:34.49:0,34,570	0/0:19,0:19:54.03:0,54,494	0/0:23,0:23:66.04:0,66,604	0/0:28,0:28:72.02:0,72,655	0/0:28,0:28:69.01:0,69,626	0/0:8,0:8:15:0,15,137	0/0:21,0:20:57.02:0,57,522	0/0:27,0:27:72.04:0,72,659	0/0:17,0:17:42.01:0,42,384	0/0:22,0:22:60.03:0,60,549	0/0:18,0:18:41.93:0,42,384	0/0:24,0:24:63.02:0,63,576	0/0:21,0:21:54.02:0,54,494	0/0:24,0:25:68.06:0,68,610	0/0:32,2:34:46.36:0,46,666	0/0:8,0:8:24.01:0,24,220
chr10	66800791	.	GA	G	565.89	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.299;DP=607;FS=0.000;HRun=6;HaplotypeScore=58.0262;InbreedingCoeff=0.9855;MQ=78.61;MQ0=0;MQRankSum=-2.654;QD=21.76;ReadPosRankSum=-1.435;VQSLOD=2.4272;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:75.22:0,75,945	0/0:9,0:9:27.09:0,27,345	0/0:22,0:22:52.60:0,53,585	0/0:13,0:13:17.94:0,18,251	1/1:1,25:26:63.12:661,63,0	0/0:27,0:27:78.24:0,78,999	0/0:23,0:23:60.16:0,60,737	0/0:29,0:29:72.20:0,72,881	0/0:21,0:21:54.17:0,54,688	0/0:28,0:28:78.20:0,78,961	0/0:26,0:26:78.23:0,78,987	0/0:11,0:11:33.10:0,33,413	0/0:29,0:29:84.26:0,84,1077	0/0:16,0:16:45.15:0,45,584	0/0:22,0:22:66.17:0,66,806	0/0:32,0:32:77.61:0,78,1028	0/0:26,0:26:69.17:0,69,849	0/0:9,0:9:27.09:0,27,348	0/0:21,0:21:57.15:0,57,701	0/0:24,0:24:62.94:0,63,814	0/0:19,0:19:57.14:0,57,708	0/0:16,0:16:39.13:0,39,506	0/0:21,0:21:57.16:0,57,712	0/0:19,0:19:54.15:0,54,674	0/0:15,0:15:42.14:0,42,546	0/0:28,0:27:75.21:0,75,936	0/0:41,0:41:99:0,108,1389	0/0:7,0:7:21.01:0,21,253
chr10	66801090	.	T	TC	4419.06	PASS	AB=0.733;AC=11;AF=0.196;AN=56;BaseQRankSum=10.223;DP=659;FS=1.226;HRun=1;HaplotypeScore=74.3832;InbreedingCoeff=0.4171;MQ=81.31;MQ0=0;MQRankSum=-0.814;QD=18.49;ReadPosRankSum=0.043;VQSLOD=4.9590;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,40:41:99:1509,105,0	1/1:0,4:4:12.04:173,12,0	0/0:17,0:18:50.97:0,51,590	0/0:22,0:21:54.13:0,54,643	0/0:12,0:12:32.43:0,32,366	0/0:13,0:13:38.94:0,39,461	0/0:26,0:26:78.23:0,78,975	1/1:0,29:29:87.03:1121,87,0	0/0:22,0:22:66.19:0,66,828	0/0:21,0:21:57.17:0,57,717	0/0:30,0:30:87.24:0,87,1070	0/1:28,10:38:99:218,0,894	0/1:16,12:28:99:311,0,515	0/1:12,16:28:99:449,0,308	0/0:27,0:27:78.25:0,78,1009	0/0:15,0:15:39.12:0,39,492	0/0:26,0:26:78.14:0,78,957	0/0:13,0:13:36.05:0,36,432	0/0:19,0:19:51.10:0,51,615	0/0:25,0:25:72.20:0,72,892	0/0:38,0:38:99:0,114,1382	0/0:18,0:18:54.16:0,54,665	0/1:20,4:24:99:103,0,656	0/1:25,22:47:99:536,0,742	0/0:26,0:26:78.21:0,78,971	0/0:25,0:25:72.07:0,72,880	0/0:21,0:21:54.17:0,54,697	0/0:3,0:3:9.03:0,9,116
chr10	66801199	.	GAT	G	612.27	PASS	AB=0.929;AC=8;AF=0.148;AN=54;BaseQRankSum=4.988;DP=550;FS=18.303;HRun=0;HaplotypeScore=150.3475;InbreedingCoeff=0.3912;MQ=65.50;MQ0=11;MQRankSum=0.731;QD=3.71;ReadPosRankSum=0.617;VQSLOD=1.9102;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:26:23.85:188,24,0	./.	0/0:29,0:15:41.92:0,42,414	0/0:28,0:19:50.78:0,51,429	0/0:9,0:8:11.97:0,12,96	0/0:21,0:21:26.78:0,27,219	0/0:20,0:19:41.58:0,42,342	1/1:12,9:21:47.69:378,48,0	0/0:16,0:16:9.87:0,10,76	0/0:16,0:16:41.09:0,41,315	0/0:14,0:14:23.96:0,24,196	0/1:22,0:22:51.99:52,0,131	0/1:24,0:24:76.75:77,0,379	0/1:26,1:27:53.79:54,0,181	0/0:19,0:18:11.93:0,12,93	0/0:8,0:8:17.98:0,18,149	0/0:26,0:25:41.56:0,42,301	0/0:13,0:13:30.61:0,31,211	0/0:14,0:14:37.98:0,38,310	0/0:22,0:22:44.84:0,45,361	0/0:30,0:29:44.77:0,45,346	0/0:32,0:31:68.97:0,69,713	0/0:15,0:15:32.97:0,33,346	0/1:30,15:43:8.87:9,0,648	0/0:11,0:11:8.90:0,9,73	0/0:17,0:17:42.03:0,42,304	0/0:15,0:15:33.86:0,34,217	0/0:10,0:10:18.94:0,19,126
chr10	66801202	.	ATATG	A	570.78	PASS	AB=1.000;AC=10;AF=0.185;AN=54;BaseQRankSum=8.976;DP=557;FS=16.293;HRun=0;HaplotypeScore=162.8407;InbreedingCoeff=0.2656;MQ=64.16;MQ0=11;MQRankSum=-4.657;QD=3.34;ReadPosRankSum=1.526;VQSLOD=1.4814;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:19,3:22:26.90:247,27,0	./.	0/0:29,0:15:41.92:0,42,414	0/0:26,0:18:50.78:0,51,429	0/0:9,0:8:11.71:0,12,96	0/0:18,0:18:26.78:0,27,219	0/0:20,0:19:41.51:0,42,342	1/1:21,0:21:30.66:358,31,0	0/1:18,0:18:0.66:1,0,62	0/0:15,0:15:10.14:0,10,259	0/0:14,0:14:23.85:0,24,196	0/1:23,0:23:8.21:8,0,161	0/1:27,0:27:73.72:74,0,601	0/1:30,0:30:13.75:14,0,182	0/0:20,0:19:11.77:0,12,93	0/0:8,0:8:17.98:0,18,149	0/0:26,0:25:23.36:0,23,275	0/0:14,0:14:2.33:0,2,233	0/0:16,0:16:32.26:0,32,297	0/0:22,0:22:44.64:0,45,360	0/0:28,0:27:44.54:0,45,345	0/0:30,0:29:50.67:0,51,950	0/0:23,0:23:47.96:0,48,661	0/0:47,1:46:83.13:0,83,1035	0/0:9,0:9:8.95:0,9,73	0/1:17,0:17:1:1,0,236	0/1:13,0:13:6.52:7,0,154	0/0:10,0:10:0.04:0,0,98
chr10	66801204	.	ATGTGTGTGTGTG	A	3134.86	PASS	AB=0.744;AC=32;AF=0.640;AN=50;BaseQRankSum=5.294;DP=557;FS=4.954;HRun=0;HaplotypeScore=214.5363;InbreedingCoeff=0.4053;MQ=61.92;MQ0=11;MQRankSum=-5.600;QD=10.24;ReadPosRankSum=1.608;VQSLOD=1.9806;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:4.98:0,5,181	./.	./.	./.	1/1:15,0:14:0.47:1,0,0	1/1:10,4:15:3.01:45,3,0	1/1:16,3:18:9.03:182,9,0	0/0:22,0:22:23.98:0,24,608	1/1:4,12:17:3.01:103,3,0	1/1:11,4:15:12.04:414,12,0	1/1:9,5:14:5.65:92,6,0	0/1:13,8:22:99:393,0,414	0/0:26,0:26:27.56:0,28,1313	0/1:20,9:29:68.70:69,0,125	0/0:6,13:19:2.45:0,2,24	1/1:6,2:8:3:25,3,0	1/1:21,4:24:6.02:207,6,0	0/1:13,1:14:99:191,0,275	1/1:14,1:15:0.02:195,0,0	1/1:16,4:22:3.48:54,3,0	1/1:26,1:27:3.17:47,3,0	0/0:31,0:30:45.14:0,45,2104	0/0:28,0:28:42.60:0,43,2093	0/0:46,0:44:48.16:0,48,2356	0/1:2,6:8:0:0,0,0	1/1:13,5:18:13.63:515,14,0	1/1:8,5:13:18.06:557,18,0	1/1:8,2:10:6.01:207,6,0
chr10	66801253	.	T	TGATA	7440.31	PASS	AB=0.722;AC=38;AF=0.760;AN=50;BaseQRankSum=-5.749;DP=570;FS=4.695;HRun=0;HaplotypeScore=156.0863;InbreedingCoeff=0.5937;MQ=44.34;MQ0=55;MQRankSum=-0.335;QD=19.03;ReadPosRankSum=-1.467;VQSLOD=4.2378;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:14:2.94:18,3,0	./.	./.	./.	1/1:7,0:13:2.98:23,3,0	1/1:11,9:21:18.06:421,18,0	1/1:15,5:19:9.50:212,10,0	1/1:11,0:8:6.01:67,6,0	0/0:20,0:20:15.05:0,15,231	1/1:15,4:18:12.04:281,12,0	1/1:9,8:17:21.07:491,21,0	1/1:13,9:24:20.54:489,21,0	0/1:15,0:21:33.79:34,0,287	1/1:22,3:28:7.17:209,7,0	1/1:18,4:24:12.04:280,12,0	0/1:7,7:14:16.03:561,0,16	1/1:13,11:24:24.55:518,25,0	1/1:6,6:13:15.05:350,15,0	1/1:11,8:19:30.10:587,30,0	1/1:12,13:26:30.10:702,30,0	0/0:15,0:20:0.47:0,0,1	0/0:16,0:16:21.07:0,21,323	0/0:30,0:28:39.12:0,39,577	0/0:32,0:31:15.03:0,15,208	1/1:9,11:21:27.09:631,27,0	1/1:17,10:26:30.10:677,30,0	1/1:10,12:20:30.10:678,30,0	1/1:5,2:10:9.50:212,10,0
chr10	66801493	.	C	CAAACAAACAAAT	4321.91	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-0.563;DP=754;FS=27.363;HRun=0;HaplotypeScore=256.7034;InbreedingCoeff=0.9421;MQ=68.58;MQ0=0;MQRankSum=-6.911;QD=37.58;ReadPosRankSum=-3.526;VQSLOD=2.8559;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:17,21:40:42.13:2170,42,0	1/1:3,5:8:3.01:178,3,0	0/0:32,0:30:50.88:0,51,1304	0/0:33,0:31:51.30:0,51,1236	1/1:12,7:25:17.93:746,18,0	0/0:31,0:31:75.24:0,75,2277	0/0:19,0:19:45.14:0,45,1454	1/1:41,0:41:54.14:1228,54,0	0/0:29,0:29:63.22:0,63,1952	0/0:32,0:32:84.28:0,84,2647	0/0:28,0:28:57.20:0,57,1913	0/0:18,0:18:45.13:0,45,1430	0/0:22,0:22:57.15:0,57,1675	0/0:25,0:25:63.20:0,63,1946	0/0:20,0:20:48.13:0,48,1326	0/0:19,0:19:45.14:0,45,1315	0/0:37,0:37:81.28:0,81,2688	0/0:20,0:20:14.55:0,15,1304	0/0:24,0:24:45.14:0,45,1388	0/0:27,0:27:66.21:0,66,2118	0/0:30,0:30:69.20:0,69,2167	0/0:29,0:29:57.16:0,57,1778	0/0:24,0:24:54.17:0,54,1666	0/0:32,0:32:78.27:0,78,2614	0/0:24,0:24:60.14:0,60,1542	0/0:35,0:35:84.27:0,84,2659	0/0:33,0:33:84.25:0,84,2723	0/0:16,0:16:33.11:0,33,1111
chr10	66803978	.	C	CA	3783.99	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-9.811;DP=627;FS=14.296;HRun=1;HaplotypeScore=55.8912;InbreedingCoeff=0.9996;MQ=80.69;MQ0=0;MQRankSum=-3.710;QD=41.13;ReadPosRankSum=0.262;VQSLOD=2.5104;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,35:37:99:1456,99,0	1/1:0,9:9:27.09:405,27,0	0/0:16,0:16:48.12:0,48,589	0/0:17,0:17:42.10:0,42,527	1/1:2,20:22:63.17:912,63,0	0/0:24,0:24:66.20:0,66,841	0/0:14,0:14:42.14:0,42,545	1/1:1,23:24:69.22:1011,69,0	0/0:24,0:24:72.22:0,72,921	0/0:28,0:28:81.20:0,81,991	0/0:20,0:20:60.18:0,60,762	0/0:24,0:24:69.21:0,69,881	0/0:19,0:19:54.16:0,54,685	0/0:24,0:24:72.22:0,72,921	0/0:32,0:32:93.29:0,93,1192	0/0:23,0:23:66.20:0,66,842	0/0:19,0:19:57.19:0,57,740	0/0:12,0:12:36.11:0,36,452	0/0:20,0:20:60.02:0,60,741	0/0:24,0:24:72.22:0,72,915	0/0:39,0:39:99:0,117,1504	0/0:19,0:19:54.16:0,54,685	0/0:22,0:22:66.19:0,66,838	0/0:34,0:34:96.28:0,96,1228	0/0:14,0:14:42.14:0,42,545	0/0:21,0:21:60.19:0,60,767	0/0:25,0:25:75.24:0,75,967	0/0:21,0:21:63.20:0,63,816
chr10	66805660	.	C	CA	794.63	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-5.335;DP=665;FS=1.638;HRun=6;HaplotypeScore=60.9738;InbreedingCoeff=0.9832;MQ=82.24;MQ0=0;MQRankSum=-2.160;QD=26.49;ReadPosRankSum=-1.220;VQSLOD=3.5286;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,105,1071	0/0:6,0:6:15.03:0,15,153	0/0:25,0:25:72.16:0,72,732	0/0:12,0:12:26.84:0,27,253	1/1:3,27:30:75.11:890,75,0	0/0:26,0:26:75.17:0,75,765	0/0:16,0:16:42.09:0,42,429	0/0:34,0:34:96.16:0,96,959	0/0:20,0:20:54.10:0,54,543	0/0:25,0:25:63.14:0,63,643	0/0:21,0:21:63.14:0,63,643	0/0:19,0:19:42.09:0,42,429	0/0:30,0:30:87.20:0,87,887	0/0:20,0:20:57.13:0,57,581	0/0:17,0:17:48.11:0,48,489	0/0:31,0:31:81.18:0,81,825	0/0:21,0:21:54.10:0,54,543	0/0:16,0:16:36.08:0,36,367	0/0:30,0:30:72.15:0,72,734	0/0:32,0:32:72.16:0,72,735	0/0:29,0:29:75.14:0,75,758	0/0:33,0:33:87.18:0,87,880	0/0:20,0:20:57.12:0,57,581	0/0:19,0:19:57.13:0,57,582	0/0:24,0:24:66.15:0,66,673	0/0:24,0:24:69.15:0,69,703	0/0:32,0:31:84.19:0,84,857	0/0:15,0:15:45.10:0,45,459
chr10	66806444	.	ATT	A	9628.27	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=3.370;DP=550;FS=13.917;HRun=12;HaplotypeScore=73.2328;InbreedingCoeff=0.8536;MQ=62.64;MQ0=2;MQRankSum=0.050;QD=21.35;ReadPosRankSum=6.439;VQSLOD=2.3807;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,20:25:51.27:544,51,0	1/1:1,4:5:12.03:122,12,0	0/0:12,0:10:10.29:0,10,128	0/0:6,0:5:6.02:0,6,90	0/0:11,0:11:0:0,0,1	1/1:5,19:25:42.48:506,42,0	1/1:6,16:22:42.03:422,42,0	1/1:8,20:28:53.07:567,53,0	1/1:8,9:17:38.99:373,39,0	1/1:13,18:31:15.34:524,15,0	1/1:4,25:29:66.07:671,66,0	1/1:8,10:19:3.09:352,3,0	0/0:18,0:18:36.06:0,36,423	1/1:6,4:10:20.94:184,21,0	1/1:10,13:23:51.04:495,51,0	1/1:6,15:21:34.03:463,34,0	1/1:5,25:30:74.87:807,75,0	1/1:9,21:30:51:700,51,0	1/1:5,13:19:38.75:372,39,0	1/1:3,25:28:69.09:702,69,0	1/1:2,8:10:1.16:218,1,0	0/0:12,0:12:33.04:0,33,413	0/0:24,0:25:75.07:0,75,983	0/0:15,0:15:36.08:0,36,440	1/1:3,11:15:26.78:327,27,0	1/1:9,15:24:44.95:442,45,0	1/1:11,17:28:63.03:623,63,0	1/1:2,8:10:21.04:214,21,0
chr10	66806455	.	TTG	T	2592.06	PASS	AB=0.953;AC=28;AF=0.519;AN=54;BaseQRankSum=12.069;DP=524;FS=5.333;HRun=0;HaplotypeScore=96.4049;InbreedingCoeff=-0.1174;MQ=64.39;MQ0=2;MQRankSum=2.191;QD=6.04;ReadPosRankSum=10.141;VQSLOD=1.3617;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:24:17.16:85,0,17	0/1:5,0:5:11.38:13,0,11	0/0:19,0:17:9.82:0,10,302	0/0:8,0:7:1.36:0,1,103	./.	0/1:22,1:22:14.77:70,0,15	0/1:20,1:21:31.38:104,0,31	0/1:33,0:33:16.94:17,0,250	1/1:10,5:15:14.18:248,14,0	0/1:23,1:24:80.67:83,0,81	0/1:30,0:30:40.04:132,0,40	1/1:13,4:17:3.71:160,4,0	0/0:13,0:13:20.43:0,20,304	0/1:7,4:11:45.24:155,0,45	1/1:15,5:20:23.02:279,23,0	0/1:18,1:19:3.94:137,0,4	0/1:33,3:35:77.01:306,0,77	1/1:25,5:30:2.28:326,2,0	0/1:18,0:18:25.94:26,0,80	0/1:29,0:29:41.01:114,0,41	0/1:11,0:11:25.55:27,0,26	0/0:12,0:12:24.06:0,24,336	0/0:27,0:27:63.15:0,63,944	0/0:15,0:15:26.87:0,27,307	1/1:12,0:12:10.71:73,11,0	1/1:16,1:17:3.49:86,3,0	0/1:20,4:24:9.29:269,0,9	1/1:9,0:9:16.15:51,16,0
chr10	66806671	.	A	AAAAAC	1948.81	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-0.095;DP=672;FS=10.662;HRun=0;HaplotypeScore=126.8755;InbreedingCoeff=0.8877;MQ=77.88;MQ0=0;MQRankSum=-3.110;QD=62.86;ReadPosRankSum=-1.870;VQSLOD=3.8662;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,102,1848	0/0:3,0:3:9.03:0,9,174	0/0:24,0:24:45.46:0,45,845	0/0:28,0:27:50.25:0,50,865	1/1:1,30:31:81.27:2044,81,0	0/0:18,0:18:48.12:0,48,869	0/0:31,0:31:81.28:0,81,1542	0/0:28,0:28:47.43:0,47,868	0/0:23,0:23:54.19:0,54,1041	0/0:34,0:34:81.27:0,81,1532	0/0:27,0:27:63.21:0,63,1169	0/0:18,0:18:54.12:0,54,930	0/0:23,0:23:54.19:0,54,1041	0/0:25,0:25:66.23:0,66,1272	0/0:25,0:25:60.18:0,60,1083	0/0:23,0:23:66.23:0,66,1254	0/0:22,0:21:57.17:0,57,1054	0/0:15,0:15:33.10:0,33,590	0/0:22,0:22:57.18:0,57,1043	0/0:25,0:25:63.22:0,63,1176	0/0:22,0:21:57.16:0,57,976	0/0:18,0:18:48.16:0,48,915	0/0:27,0:27:69.22:0,69,1254	0/0:27,0:27:69.19:0,69,1292	0/0:23,0:23:54.18:0,54,1028	0/0:29,0:29:72.25:0,72,1387	0/0:29,0:29:72.24:0,72,1346	0/0:12,0:12:8.25:0,8,554
chr10	66808608	.	G	GA	3717.76	PASS	AB=0.674;AC=35;AF=0.625;AN=56;BaseQRankSum=-5.067;DP=541;FS=1.539;HRun=13;HaplotypeScore=60.3284;InbreedingCoeff=0.3965;MQ=50.99;MQ0=23;MQRankSum=-2.001;QD=9.25;ReadPosRankSum=-0.411;VQSLOD=2.6326;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:15,23:38:18.51:303,19,0	1/1:4,3:7:8.16:82,8,0	0/0:8,0:1:2.97:0,3,20	0/0:10,0:2:2.94:0,3,18	0/0:28,0:25:65.30:0,65,446	1/1:5,10:15:21.02:195,21,0	0/1:12,7:16:5.64:85,0,6	1/1:11,5:17:9.82:101,10,0	0/1:13,8:21:15.32:94,0,15	1/1:11,7:18:23.82:208,24,0	1/1:9,12:21:36.59:299,37,0	0/1:8,11:19:17.13:142,0,17	0/0:23,1:26:24.05:0,24,188	1/1:8,9:15:15.01:138,15,0	1/1:5,14:19:27.03:250,27,0	0/1:4,8:13:7.20:142,0,7	0/1:17,16:33:36.13:249,0,36	0/1:6,12:17:16.01:166,0,16	1/1:7,8:15:3.72:185,4,0	1/1:8,13:21:30:271,30,0	0/1:8,6:14:4.15:72,0,4	0/0:21,0:20:38.60:0,39,265	0/0:24,0:24:36.18:0,36,263	0/0:20,0:20:19.88:0,20,244	1/1:5,18:22:12.56:258,13,0	1/1:13,6:20:17.82:143,18,0	1/1:5,11:16:16.57:280,17,0	1/1:7,3:7:6.01:56,6,0
chr10	66808734	.	TGC	T	16032.32	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=13.838;DP=646;FS=1.711;HRun=0;HaplotypeScore=77.3664;InbreedingCoeff=0.9996;MQ=81.67;MQ0=2;MQRankSum=-3.543;QD=41.00;ReadPosRankSum=8.082;VQSLOD=6.2304;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,102,2055	0/0:8,0:8:24.08:0,24,487	0/0:26,0:25:75.04:0,75,1412	0/0:26,0:26:66.17:0,66,1374	0/0:30,0:30:90.27:0,90,1724	1/1:0,19:19:51.17:830,51,0	1/1:0,18:18:45.15:733,45,0	0/0:30,0:30:90.29:0,90,1746	1/1:0,18:18:45.15:732,45,0	1/1:0,22:22:66.21:1047,66,0	1/1:0,21:20:45.15:734,45,0	1/1:0,25:25:66.23:1074,66,0	0/0:20,0:20:57.18:0,57,1107	1/1:0,18:18:42.14:683,42,0	1/1:0,18:18:42.14:684,42,0	1/1:0,14:14:33.11:537,33,0	1/1:0,31:31:75.26:1221,75,0	1/1:0,30:29:81.28:1320,81,0	1/1:0,12:13:39.11:580,39,0	1/1:0,25:25:63.22:1026,63,0	1/1:0,35:35:90.31:1466,90,0	0/0:28,0:28:84.25:0,84,1585	0/0:20,0:20:57.15:0,57,1026	0/0:32,0:32:96.29:0,96,1863	1/1:0,23:23:57.19:929,57,0	1/1:0,24:24:72.20:1115,72,0	1/1:0,24:24:51.17:830,51,0	1/1:0,13:13:30.10:489,30,0
chr10	66811319	.	TA	T	1329.96	PASS	AB=1.000;AC=38;AF=0.704;AN=54;BaseQRankSum=5.488;DP=342;FS=0.000;HRun=11;HaplotypeScore=73.9403;InbreedingCoeff=0.5521;MQ=59.99;MQ0=9;MQRankSum=0.236;QD=4.48;ReadPosRankSum=3.294;VQSLOD=0.8213;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,16:17:44.94:368,45,0	1/1:1,4:5:11.99:98,12,0	0/0:15,0:8:14.87:0,15,128	0/0:9,0:3:2.63:0,3,30	./.	1/1:12,0:12:12.01:31,12,0	1/1:16,0:16:15.88:43,16,0	1/1:4,19:22:56.91:466,57,0	1/1:7,0:6:3.74:10,4,0	0/1:18,0:18:1.09:24,0,1	1/1:15,0:15:13.98:38,14,0	1/1:9,0:9:7.78:21,8,0	0/0:10,0:10:27.07:0,27,288	1/1:8,0:8:4.98:14,5,0	1/1:9,0:8:7.77:22,8,0	1/1:7,0:7:4.98:14,5,0	1/1:13,0:14:7.77:22,8,0	1/1:18,0:16:14.01:38,14,0	1/1:20,0:18:22.34:61,22,0	0/1:17,0:17:1.81:33,0,2	1/1:12,0:12:11.15:31,11,0	0/0:3,0:3:9.02:0,9,96	0/0:4,0:4:9.01:0,9,88	0/0:3,0:3:9:0,9,87	1/1:14,0:14:13.89:38,14,0	0/1:21,0:20:12.25:30,0,12	0/1:24,0:24:2.55:55,0,3	1/1:9,0:9:14.26:40,14,0
chr10	66811326	.	AAAAAT	A	2257.14	PASS	AB=1.000;AC=35;AF=0.648;AN=54;BaseQRankSum=1.112;DP=360;FS=0.566;HRun=0;HaplotypeScore=97.4685;InbreedingCoeff=0.7926;MQ=64.95;MQ0=7;MQRankSum=-2.859;QD=8.62;ReadPosRankSum=2.455;VQSLOD=2.2190;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:21:57.10:0,57,825	0/0:5,0:5:12.04:0,12,191	0/0:18,0:10:21.07:0,21,442	0/0:10,0:4:5.77:0,6,35	./.	0/1:15,0:15:3.09:3,0,17	1/1:15,0:15:12.71:40,13,0	0/0:21,0:21:57.19:0,57,858	1/1:7,0:6:2.66:6,3,0	1/1:22,0:22:18.84:172,19,0	1/1:15,0:15:11.74:40,12,0	1/1:11,0:11:5.32:11,5,0	0/0:10,0:10:30.10:0,30,827	1/1:8,0:8:3.54:7,4,0	1/1:9,0:8:14.84:101,15,0	1/1:7,0:7:3.54:8,4,0	1/1:12,1:13:14.84:101,15,0	1/1:15,0:14:9.74:21,10,0	1/1:18,1:18:45.43:385,45,0	1/1:17,0:17:41.62:307,42,0	1/1:11,1:12:20.81:178,21,0	0/0:3,0:3:9.03:0,9,256	0/0:5,0:5:12.04:0,12,305	0/0:3,0:3:9.03:0,9,239	1/1:15,0:15:10.20:36,10,0	1/1:22,1:22:37.99:374,38,0	1/1:30,0:30:62.38:445,62,0	1/1:9,0:9:26.75:218,27,0
chr10	66811327	.	AAAAT	A	6176.10	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-3.103;DP=362;FS=1.079;HRun=0;HaplotypeScore=75.6667;InbreedingCoeff=0.8883;MQ=66.44;MQ0=7;MQRankSum=-1.963;QD=23.57;ReadPosRankSum=2.476;VQSLOD=4.6167;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:21:57.04:0,57,610	0/0:5,0:5:12.04:0,12,140	0/0:18,0:10:21.07:0,21,400	0/0:11,0:5:1.95:0,2,28	0/0:1,0:1:3:0,3,25	1/1:15,0:15:25.12:144,25,0	1/1:13,1:14:35:230,35,0	0/0:21,0:21:60.11:0,60,650	1/1:7,0:6:8.71:49,9,0	1/1:22,1:23:54.13:378,54,0	1/1:14,1:15:35.04:225,35,0	1/1:11,0:11:17.44:98,17,0	0/0:10,0:10:30.10:0,30,702	1/1:9,0:9:11.65:66,12,0	1/1:1,8:8:15.05:253,15,0	1/1:7,0:7:11.61:65,12,0	1/1:4,9:13:15.05:253,15,0	1/1:13,1:13:31.93:178,32,0	1/1:6,13:18:50.96:726,51,0	1/1:2,15:17:42.11:678,42,0	1/1:2,10:12:21.07:337,21,0	0/0:3,0:3:9.03:0,9,218	0/0:5,0:5:12.04:0,12,267	0/0:3,0:3:9.03:0,9,212	1/1:14,1:15:31.79:210,32,0	1/1:5,18:22:54.61:803,55,0	1/1:2,28:30:63.21:1045,63,0	1/1:1,8:9:27.09:438,27,0
chr10	66811328	.	AAAT	A	6679.09	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-3.040;DP=362;FS=0.506;HRun=0;HaplotypeScore=68.3443;InbreedingCoeff=0.9035;MQ=66.46;MQ0=7;MQRankSum=-2.407;QD=25.69;ReadPosRankSum=2.776;VQSLOD=4.8326;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:21:56.42:0,56,417	0/0:6,0:6:14.95:0,15,117	0/0:18,0:10:21.06:0,21,325	0/0:10,0:5:2.04:0,2,31	0/0:2,0:2:5.97:0,6,46	1/1:2,13:15:32.69:434,33,0	1/1:1,13:14:36.12:526,36,0	0/0:21,0:21:58.68:0,59,424	1/1:1,6:6:9.03:136,9,0	1/1:4,19:23:57.06:699,57,0	1/1:2,13:15:36.08:518,36,0	1/1:0,11:11:18.06:272,18,0	0/0:10,0:10:30.10:0,30,575	1/1:0,9:9:12.04:181,12,0	1/1:9,0:8:15.02:143,15,0	1/1:1,6:7:12.04:182,12,0	1/1:12,0:12:15.02:144,15,0	1/1:2,12:13:33.11:499,33,0	1/1:17,2:18:50.99:483,51,0	1/1:16,0:16:42.04:394,42,0	1/1:12,0:12:21.03:200,21,0	0/0:3,0:3:9.03:0,9,179	0/0:5,0:5:12.04:0,12,218	0/0:3,0:3:9.03:0,9,179	1/1:4,11:15:33.03:487,33,0	1/1:23,0:22:57.03:521,57,0	1/1:30,0:30:63.10:602,63,0	1/1:9,0:9:27.04:257,27,0
chr10	66812245	.	TATTGATGCTCATCACCTTCTTATGGAGGA	T	1805.50	PASS	AB=1.000;AC=29;AF=0.690;AN=42;BaseQRankSum=-1.367;DP=659;FS=8.864;HRun=0;HaplotypeScore=246.2263;InbreedingCoeff=0.6768;MQ=40.88;MQ0=191;MQRankSum=0.150;QD=5.64;ReadPosRankSum=5.236;VQSLOD=0.8798;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:20:3.01:0,3,51	0/0:20,0:9:7.79:0,8,77	./.	./.	0/1:10,0:7:20.98:21,0,71	1/1:19,0:17:9:100,9,0	./.	./.	1/1:36,0:26:14.99:194,15,0	1/1:30,0:17:21.05:296,21,0	1/1:6,0:6:3:25,3,0	1/1:26,0:18:23.82:248,24,0	0/0:43,0:40:75.15:0,75,1094	1/1:30,0:23:23.78:223,24,0	1/1:18,0:14:8.75:81,9,0	1/1:27,0:23:12.01:150,12,0	1/1:15,0:9:3.01:47,3,0	./.	./.	1/1:21,0:17:20.88:210,21,0	1/1:29,0:19:4.51:23,5,0	0/0:35,0:31:66.09:0,66,1148	0/0:33,0:33:60.16:0,60,865	0/0:23,0:22:23.45:0,23,554	1/1:16,0:14:12.03:169,12,0	1/1:18,6:17:9.01:102,9,0	1/1:13,0:10:8.96:79,9,0	./.
chr10	66812665	.	GCCTTCTTATGGAGGTATTGATGCTCATCA	G	712.84	PASS	AB=0.942;AC=12;AF=0.214;AN=56;BaseQRankSum=4.063;DP=1239;FS=20.243;HRun=0;HaplotypeScore=554.2741;InbreedingCoeff=-0.0018;MQ=49.02;MQ0=160;MQRankSum=-4.511;QD=1.50;ReadPosRankSum=-0.127;VQSLOD=-0.1961;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,0:5:3.43:20,3,0	0/1:2,0:2:0:0,0,0	0/0:54,0:25:32.95:0,33,314	0/0:38,0:22:25.30:0,25,250	0/1:8,0:8:0:0,0,0	0/0:56,0:39:47.98:0,48,702	0/0:35,0:29:4.78:0,5,273	0/0:19,0:2:6:0,6,69	0/1:52,0:38:29.87:30,0,467	0/1:76,0:56:99:145,0,1331	0/1:31,12:36:22.69:23,0,394	0/1:75,0:51:26.06:26,0,237	0/0:84,0:76:99:0,168,3280	0/0:55,0:44:10.80:0,11,903	0/0:49,0:31:27.94:0,28,730	0/0:47,0:38:36.41:0,36,474	0/0:32,0:22:32.98:0,33,422	0/0:12,0:9:14.92:0,15,115	0/1:41,13:41:99:399,0,259	0/1:52,0:41:40.31:40,0,312	0/0:57,0:41:38.60:0,39,606	0/0:69,0:57:99:0,108,1661	0/0:46,0:38:80.86:0,81,1349	0/0:40,0:38:98.58:0,99,1643	0/0:44,0:34:36.40:0,36,629	0/1:41,10:39:99:109,0,926	0/1:55,0:43:60.10:60,0,432	0/0:28,0:19:9.03:0,9,198
chr10	66812975	.	ATGCTCATCACCTTCTTATGGAGGTATTGG	A	5001.74	PASS	AB=0.966;AC=23;AF=0.442;AN=52;BaseQRankSum=3.107;DP=967;FS=19.256;HRun=0;HaplotypeScore=346.4045;InbreedingCoeff=-0.3630;MQ=36.70;MQ0=126;MQRankSum=-5.289;QD=6.58;ReadPosRankSum=-1.510;VQSLOD=2.1972;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:56,0:34:99:130,0,204	0/1:19,0:12:2.01:122,0,2	./.	./.	0/0:13,0:8:14.97:0,15,137	0/1:51,0:38:99:579,0,206	0/1:16,0:12:10.90:11,0,57	0/1:45,12:10:28.34:96,0,28	0/1:60,0:41:99:417,0,488	0/1:22,46:52:99:996,0,467	0/1:23,0:20:87.54:139,0,88	0/1:57,0:35:99:178,0,399	0/0:45,0:45:99:0,135,3356	0/1:63,0:42:99:270,0,292	0/1:37,0:19:72.50:72,0,93	0/1:39,0:26:99:290,0,383	0/1:13,0:9:96.75:97,0,183	1/1:10,0:6:3.01:74,3,0	1/1:8,5:5:7.82:57,8,0	0/1:40,0:32:99:309,0,302	1/1:29,0:15:5.99:100,6,0	0/0:34,0:29:77.93:0,78,1626	0/0:37,0:30:66.70:0,67,1401	0/0:27,0:26:75.17:0,75,1996	0/1:35,0:21:40.54:41,0,194	0/1:26,0:20:99:502,0,190	0/1:48,0:36:99:523,0,407	0/0:16,0:15:5.48:0,5,193
chr10	66814386	.	T	TA	1200.39	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=8.684;DP=668;FS=5.802;HRun=2;HaplotypeScore=70.6723;InbreedingCoeff=0.9969;MQ=93.49;MQ0=0;MQRankSum=-2.028;QD=33.34;ReadPosRankSum=2.597;VQSLOD=3.9546;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,153,1895	0/0:8,0:8:24.08:0,24,298	0/0:27,0:27:73.86:0,74,850	0/0:32,0:32:82.54:0,83,909	1/1:2,34:36:90.30:1295,90,0	0/0:20,0:20:57.14:0,57,669	0/0:27,0:27:78.24:0,78,967	0/0:30,0:30:78.24:0,78,967	0/0:24,0:24:72.23:0,72,893	0/0:21,0:21:60.18:0,60,734	0/0:21,0:21:63.20:0,63,781	0/0:27,0:27:78.22:0,78,942	0/0:22,0:22:60.17:0,60,730	0/0:20,0:20:57.18:0,57,706	0/0:25,0:25:75.24:0,75,930	0/0:10,0:10:27.08:0,27,335	0/0:23,0:23:63.18:0,63,767	0/0:19,0:19:51.14:0,51,618	0/0:24,0:24:69.21:0,69,843	0/0:25,0:25:69.20:0,69,842	0/0:36,0:36:99:0,105,1301	0/0:20,0:20:60.18:0,60,731	0/0:13,0:13:39.12:0,39,484	0/0:26,0:26:78.23:0,78,947	0/0:15,0:15:42.13:0,42,518	0/0:27,0:27:81.24:0,81,990	0/0:22,0:22:66.21:0,66,818	0/0:16,0:16:48.12:0,48,579
chr10	66815433	.	TAAAATTGGA	T	352.05	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.511;DP=411;FS=1.300;HRun=0;HaplotypeScore=121.7235;InbreedingCoeff=0.9197;MQ=76.54;MQ0=0;MQRankSum=-0.674;QD=19.56;ReadPosRankSum=-1.589;VQSLOD=2.9072;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:36.10:0,36,1457	0/0:8,0:8:24.08:0,24,1086	0/0:18,0:17:24.03:0,24,672	0/0:13,0:13:9.44:0,9,428	1/1:14,4:18:24.03:445,24,0	0/0:14,0:14:39.13:0,39,1781	0/0:14,0:14:36.12:0,36,1585	0/0:27,0:27:54.18:0,54,2089	0/0:13,0:13:36.12:0,36,1606	0/0:17,0:17:48.15:0,48,2058	0/0:19,0:19:39.13:0,39,1589	0/0:10,0:10:30.10:0,30,1355	0/0:13,0:13:30.09:0,30,1134	0/0:13,0:13:30.10:0,30,1395	0/0:19,0:19:51.16:0,51,2127	0/0:12,0:12:33.11:0,33,1527	0/0:14,0:14:39.13:0,39,1807	0/0:11,0:11:24.08:0,24,1030	0/0:21,0:21:47.53:0,48,1967	0/0:9,0:9:24.08:0,24,1116	0/0:8,0:8:24.08:0,24,1108	0/0:8,0:8:24.07:0,24,1002	0/0:11,0:11:27.06:0,27,1139	0/0:5,0:5:15.05:0,15,698	0/0:16,0:16:42.14:0,42,1923	0/0:18,0:18:45.15:0,45,2061	0/0:26,0:26:69.23:0,69,3026	0/0:17,0:17:42.14:0,42,1954
chr10	66815460	.	G	GTTGT	308.29	PASS	AB=0.964;AC=3;AF=0.054;AN=56;BaseQRankSum=3.457;DP=426;FS=0.000;HRun=0;HaplotypeScore=96.7335;InbreedingCoeff=0.6202;MQ=72.90;MQ0=4;MQRankSum=-2.001;QD=8.33;ReadPosRankSum=-0.811;VQSLOD=1.8149;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:33.11:0,33,590	0/0:8,0:8:21.07:0,21,388	0/0:42,0:16:29.75:0,30,419	0/1:25,0:13:30.60:31,0,210	1/1:3,6:10:17.89:381,18,0	0/0:19,0:19:57.20:0,57,1080	0/0:17,0:17:45.13:0,45,792	0/0:28,0:25:57.19:0,57,1062	0/0:6,0:6:15.04:0,15,240	0/0:25,0:25:72.25:0,72,1362	0/0:15,0:15:42.14:0,42,795	0/0:8,0:8:21.07:0,21,397	0/0:7,0:7:21.07:0,21,398	0/0:11,0:11:30.04:0,30,439	0/0:15,0:15:42.14:0,42,795	0/0:9,0:9:24.08:0,24,455	0/0:16,0:16:45.15:0,45,842	0/0:11,0:11:30.10:0,30,568	0/0:24,0:23:66.19:0,66,1137	0/0:13,0:13:36.12:0,36,681	0/0:10,0:10:24.08:0,24,455	0/0:9,0:9:27.09:0,27,512	0/0:9,0:9:24.08:0,24,449	0/0:6,0:6:18.02:0,18,304	0/0:20,0:20:57.20:0,57,1063	0/0:15,0:15:42.14:0,42,790	0/0:20,0:20:48.16:0,48,890	0/0:12,0:12:36.12:0,36,682
chr10	66815466	.	CT	C	1353.16	PASS	AB=0.768;AC=30;AF=0.536;AN=56;BaseQRankSum=-1.107;DP=473;FS=2.354;HRun=17;HaplotypeScore=81.2945;InbreedingCoeff=0.2298;MQ=72.53;MQ0=5;MQRankSum=-0.134;QD=4.92;ReadPosRankSum=5.374;VQSLOD=1.9102;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:22:20.92:0,21,110	0/0:2,0:6:11.36:0,11,56	0/0:42,2:19:6.81:0,7,41	0/0:35,2:16:12.31:0,12,84	0/0:19,0:19:18.59:0,19,86	1/1:9,10:20:15.99:180,16,0	0/1:10,5:16:40.76:77,0,41	0/0:25,0:34:61.26:0,61,348	1/1:3,1:3:2.91:17,3,0	1/1:16,7:26:17.39:176,17,0	0/1:7,5:15:18.19:88,0,18	1/1:4,1:7:9.46:40,9,0	0/0:8,0:9:1.05:0,1,91	0/1:7,1:8:15.23:24,0,15	0/1:10,5:15:3.78:75,0,4	0/1:6,2:8:15.27:25,0,15	1/1:12,4:17:0.68:70,1,0	0/1:8,3:11:19.34:35,0,19	1/1:16,6:21:23.07:133,23,0	1/1:9,5:14:2.40:109,2,0	1/1:7,2:10:7.73:39,8,0	0/0:10,0:11:14.20:0,14,137	0/1:12,3:15:14.77:15,0,162	0/0:5,0:6:5.15:0,5,60	1/1:10,9:21:4.18:115,4,0	1/1:10,6:17:1.32:98,1,0	1/1:8,6:17:28.54:140,29,0	0/1:7,4:12:32.84:76,0,33
chr10	66815494	.	AT	A	2834.06	PASS	AB=0.904;AC=38;AF=0.679;AN=56;BaseQRankSum=-0.429;DP=426;FS=23.072;HRun=13;HaplotypeScore=68.1832;InbreedingCoeff=0.7513;MQ=74.49;MQ0=5;MQRankSum=-1.803;QD=10.31;ReadPosRankSum=3.779;VQSLOD=1.1704;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:19:32.07:0,32,302	0/1:5,1:6:19.36:19,0,60	0/0:45,0:26:19.01:0,19,169	0/1:36,1:14:6.18:6,0,81	0/0:8,0:22:39.59:0,40,221	1/1:6,13:19:47.53:335,48,0	1/1:4,9:13:29.78:218,30,0	0/0:27,0:25:54.02:0,54,508	1/1:2,4:5:8.91:66,9,0	1/1:9,7:16:15.77:143,16,0	1/1:5,9:14:32.05:219,32,0	1/1:3,5:8:8.89:66,9,0	0/0:8,0:8:20.99:0,21,191	1/1:1,5:6:14.89:109,15,0	1/1:4,7:11:8.90:66,9,0	1/1:2,2:4:2.92:22,3,0	1/1:7,11:18:6.39:202,6,0	1/1:4,9:13:29.75:216,30,0	1/1:7,9:17:5.57:191,6,0	1/1:7,10:17:34.56:249,35,0	1/1:1,5:6:11.78:80,12,0	0/0:8,0:8:20.96:0,21,182	0/0:16,0:16:41.92:0,42,385	0/0:6,0:6:12:0,12,106	1/1:10,12:22:36.12:298,36,0	1/1:4,12:16:38.66:278,39,0	1/1:8,9:17:23.68:168,24,0	1/1:3,4:7:11.93:88,12,0
chr10	66815655	.	T	TTCTCTCTCTC	4608.25	PASS	AB=1.000;AC=45;AF=0.804;AN=56;BaseQRankSum=-1.527;DP=499;FS=5.911;HRun=0;HaplotypeScore=160.0655;InbreedingCoeff=0.3510;MQ=57.13;MQ0=6;MQRankSum=-1.680;QD=10.17;ReadPosRankSum=-0.352;VQSLOD=3.4639;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:21:8.98:0,9,204	0/1:5,0:6:35.81:36,0,117	1/1:18,0:10:0.47:1,0,0	0/1:27,0:14:0:0,0,0	1/1:18,0:21:11.89:89,12,0	1/1:19,0:19:12.37:94,12,0	1/1:29,0:29:35.29:310,35,0	1/1:26,0:26:19.56:241,20,0	1/1:9,0:16:5.69:101,6,0	1/1:9,0:9:9.03:322,9,0	1/1:20,0:20:5.92:79,6,0	1/1:7,0:10:2.30:210,2,0	0/0:11,0:11:20.74:0,21,467	1/1:12,0:14:14.97:263,15,0	1/1:6,11:16:3.48:149,3,0	1/1:9,5:16:9.03:358,9,0	1/1:9,5:17:12.02:330,12,0	1/1:6,0:6:12.03:175,12,0	1/1:25,0:23:23.55:353,24,0	0/1:15,0:15:20.23:70,0,20	1/1:23,0:22:6.02:125,6,0	0/0:14,0:14:20.61:0,21,465	0/1:16,0:16:63.68:64,0,321	0/1:24,0:25:32.08:67,0,32	1/1:23,0:27:23.97:323,24,0	1/1:19,0:19:35.98:445,36,0	1/1:16,0:14:18.01:309,18,0	1/1:13,0:13:9.01:93,9,0
chr10	66816432	.	GCA	G	94.21	PASS	AB=0.852;AC=4;AF=0.071;AN=56;BaseQRankSum=-0.907;DP=517;FS=0.000;HRun=0;HaplotypeScore=139.3085;InbreedingCoeff=-0.0219;MQ=35.64;MQ0=77;MQRankSum=-3.076;QD=1.96;ReadPosRankSum=-0.430;VQSLOD=2.4602;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,9:17:12.02:0,12,198	0/1:6,2:8:32.90:33,0,43	0/0:18,0:4:9:0,9,117	0/0:15,0:7:9.07:0,9,146	0/0:22,0:19:2.88:0,3,42	0/0:18,0:14:9.03:0,9,150	0/0:21,0:18:14.99:0,15,203	0/1:10,8:14:99:118,0,155	0/0:12,0:9:3.01:0,3,50	0/0:18,0:17:48.12:0,48,769	0/0:10,0:8:3.01:0,3,51	0/0:20,0:18:5.95:0,6,42	0/0:19,0:19:36.12:0,36,611	0/0:14,0:13:6.02:0,6,100	0/0:13,0:10:3.01:0,3,49	0/1:11,0:9:0:0,0,0	0/0:24,0:16:12.04:0,12,199	0/0:14,0:11:18.04:0,18,274	0/0:16,0:14:35.77:0,36,476	0/0:19,0:18:6.02:0,6,99	0/0:42,0:37:26.99:0,27,389	0/0:11,0:10:21.07:0,21,355	0/0:15,0:13:30.09:0,30,485	0/0:36,0:35:57.20:0,57,968	0/0:19,0:16:8.95:0,9,93	0/0:28,0:25:57.01:0,57,803	0/1:10,1:9:41.31:41,0,236	0/0:14,0:13:15.05:0,15,251
chr10	66816769	.	A	AT	551.55	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=2.821;DP=522;FS=0.794;HRun=9;HaplotypeScore=53.0374;InbreedingCoeff=0.6402;MQ=77.07;MQ0=0;MQRankSum=-0.760;QD=15.32;ReadPosRankSum=-0.403;VQSLOD=3.3912;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:59.96:0,60,520	0/0:4,0:4:9:0,9,78	0/1:11,0:11:10.26:10,0,105	0/0:13,0:13:23.98:0,24,206	1/1:2,23:25:40.04:644,40,0	0/0:16,0:16:44.99:0,45,391	0/0:12,0:12:35.98:0,36,309	0/0:25,0:25:61.97:0,62,521	0/0:16,0:16:41.98:0,42,365	0/0:21,0:21:38.97:0,39,337	0/0:13,0:14:41.02:0,41,341	0/0:17,0:17:41.99:0,42,364	0/0:21,0:21:62.99:0,63,547	0/0:20,0:20:53.97:0,54,465	0/0:26,0:26:68.95:0,69,592	0/0:21,0:21:47.35:0,47,412	0/0:22,0:22:62.96:0,63,541	0/0:25,0:25:65.98:0,66,573	0/0:19,0:19:44.95:0,45,386	0/0:17,0:17:44.93:0,45,380	0/0:20,0:20:41.98:0,42,364	0/0:13,0:13:29.99:0,30,260	0/0:15,0:15:38.99:0,39,339	0/0:24,0:24:65.97:0,66,573	0/0:20,0:20:47.97:0,48,417	0/0:19,0:19:50.99:0,51,442	0/0:22,0:22:59.98:0,60,521	0/0:16,0:18:43.06:0,43,351
chr10	66817402	.	TTA	T	2011.06	PASS	AB=0.944;AC=21;AF=0.375;AN=56;BaseQRankSum=2.564;DP=580;FS=45.826;HRun=0;HaplotypeScore=93.6400;InbreedingCoeff=-0.4159;MQ=81.53;MQ0=3;MQRankSum=-3.232;QD=5.02;ReadPosRankSum=4.669;VQSLOD=0.6166;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:24:66.91:105,0,67	0/0:7,0:7:8.61:0,9,34	0/0:39,0:16:12.88:0,13,251	0/0:29,0:21:24.09:0,24,225	0/0:31,0:31:39.45:0,39,391	0/1:10,10:20:95.94:96,0,103	0/1:20,2:22:45.95:183,0,46	0/1:30,0:30:54.86:55,0,231	1/1:14,1:15:15.89:76,16,0	0/1:24,3:27:99:162,0,209	0/1:17,0:17:29.92:74,0,30	0/1:21,2:23:99:138,0,134	0/0:21,0:21:57.32:0,57,827	0/1:16,0:16:51.80:52,0,73	0/1:17,1:18:28.49:28,0,102	0/1:16,1:17:21.82:64,0,22	0/1:22,0:22:37.55:149,0,38	0/1:16,0:16:4.03:39,0,4	0/1:18,2:20:99:182,0,109	0/1:27,1:28:64.06:237,0,64	0/1:7,0:7:39.62:41,0,40	0/0:16,0:16:36.54:0,37,561	0/0:15,0:15:44.85:0,45,457	0/0:21,0:21:63.04:0,63,816	0/1:13,2:15:99:104,0,114	0/1:21,1:22:99:195,0,113	0/1:28,0:28:82.58:154,0,83	0/1:13,1:14:8.27:42,0,8
chr10	66817403	.	TA	T	5853.29	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=-3.524;DP=581;FS=6.313;HRun=6;HaplotypeScore=74.1829;InbreedingCoeff=0.9411;MQ=81.60;MQ0=3;MQRankSum=-2.292;QD=14.31;ReadPosRankSum=0.510;VQSLOD=4.1761;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:26,1:27:37.15:263,37,0	1/1:7,0:7:9.51:45,10,0	0/0:39,0:17:10.11:0,10,192	0/0:28,0:20:4.74:0,5,62	0/0:32,0:32:67.38:0,67,302	1/1:17,3:20:20.83:175,21,0	1/1:12,10:22:47.65:436,48,0	1/1:28,0:28:15.28:192,15,0	1/1:1,14:15:26.99:266,27,0	1/1:15,11:26:35.77:307,36,0	1/1:3,13:16:27.76:237,28,0	1/1:17,6:23:35.70:339,36,0	0/0:21,0:21:54:0,54,541	1/1:12,5:17:29.60:268,30,0	1/1:8,10:18:15.64:147,16,0	1/1:3,14:17:26.93:272,27,0	1/1:13,9:22:47.49:431,47,0	1/1:3,13:16:24.29:255,24,0	1/1:18,3:21:36.06:298,36,0	1/1:19,9:28:65.87:582,66,0	1/1:6,2:8:15.88:137,16,0	0/0:16,0:16:34.36:0,34,332	0/0:15,0:15:23.91:0,24,233	0/0:21,0:21:56.39:0,56,536	1/1:13,1:14:19.61:180,20,0	1/1:19,2:21:38.92:336,39,0	1/1:17,12:29:61.19:574,61,0	1/1:2,12:14:11.96:113,12,0
chr10	66818343	.	TAA	T	7562.06	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=6.972;DP=482;FS=8.459;HRun=13;HaplotypeScore=67.9057;InbreedingCoeff=0.9381;MQ=71.90;MQ0=0;MQRankSum=-0.896;QD=19.69;ReadPosRankSum=3.372;VQSLOD=3.8826;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,15:20:44.14:435,44,0	1/1:1,6:7:11.97:116,12,0	0/0:16,0:11:2.91:0,3,112	0/0:14,0:12:15.41:0,15,115	1/1:4,16:22:32.88:369,33,0	1/1:4,7:12:20.73:186,21,0	1/1:4,15:19:42.04:407,42,0	1/1:11,11:22:26.77:249,27,0	1/1:1,14:15:35.94:349,36,0	1/1:4,19:25:50.38:445,50,0	1/1:1,9:12:26.48:227,26,0	1/1:0,11:13:32.53:286,33,0	0/0:8,0:9:24.05:0,24,319	1/1:6,8:15:23.74:216,24,0	1/1:4,22:26:54.06:524,54,0	1/1:5,11:16:32.99:320,33,0	1/1:3,16:20:50.79:477,51,0	1/1:2,18:20:42.05:407,42,0	1/1:5,11:18:9.86:285,10,0	1/1:2,11:13:23.98:233,24,0	1/1:2,5:7:15:145,15,0	0/0:13,0:13:36.11:0,36,501	0/0:22,0:24:66.15:0,66,880	0/0:19,0:20:53.67:0,54,747	1/1:3,14:17:42.02:407,42,0	1/1:4,18:24:56.49:518,56,0	1/1:3,21:24:63.04:611,63,0	1/1:3,14:17:36.02:349,36,0
chr10	66818835	.	GGT	G	9296.43	PASS	AB=0.991;AC=39;AF=0.696;AN=56;BaseQRankSum=8.061;DP=729;FS=1.614;HRun=0;HaplotypeScore=91.5275;InbreedingCoeff=0.6538;MQ=69.80;MQ0=4;MQRankSum=0.481;QD=17.71;ReadPosRankSum=5.870;VQSLOD=4.6005;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,3:42:18.76:0,19,1238	0/0:12,2:14:0.33:0,0,463	0/1:34,1:20:8.45:8,0,286	0/0:37,0:29:41.60:0,42,551	0/1:20,0:20:15.24:15,0,631	1/1:7,13:22:29.75:314,30,0	1/1:10,14:24:11.30:369,11,0	0/0:15,0:29:14.83:0,15,399	1/1:7,21:29:45.02:536,45,0	1/1:6,23:30:74.98:852,75,0	1/1:7,16:24:47.67:495,48,0	1/1:6,23:29:56.77:637,57,0	0/0:27,0:27:63.18:0,63,949	1/1:7,18:26:33.10:394,33,0	1/1:5,17:22:27.08:322,27,0	1/1:7,29:35:68.69:822,69,0	1/1:9,16:27:35.77:386,36,0	1/1:10,11:21:24.07:286,24,0	1/1:3,15:18:42:458,42,0	1/1:5,21:27:60.02:693,60,0	1/1:9,36:44:69.21:823,69,0	0/0:15,2:17:3.36:0,3,527	0/1:12,0:12:14.69:15,0,266	0/0:37,1:38:54.54:0,55,1312	1/1:6,21:28:54:622,54,0	1/1:5,14:19:45.14:535,45,0	1/1:4,22:26:57.17:680,57,0	1/1:4,0:4:3.01:36,3,0
chr10	66820353	.	CTTTA	C	927.93	PASS	AC=2;AF=0.037;AN=54;BaseQRankSum=6.261;DP=366;FS=10.195;HRun=0;HaplotypeScore=61.7651;InbreedingCoeff=0.8091;MQ=78.16;MQ0=0;MQRankSum=-1.575;QD=42.18;ReadPosRankSum=-0.142;VQSLOD=3.1772;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:48.16:0,48,1260	0/0:8,0:8:24.08:0,24,640	0/0:8,0:8:21.07:0,21,530	0/0:10,0:10:21.07:0,21,466	1/1:0,22:22:57.15:1022,57,0	0/0:14,0:14:39.12:0,39,951	0/0:4,0:4:9.03:0,9,240	0/0:37,0:37:99:0,111,2853	0/0:8,0:8:24.08:0,24,640	0/0:15,0:15:42.14:0,42,1120	0/0:22,0:22:66.21:0,66,1677	0/0:9,0:9:24.07:0,24,582	0/0:15,0:15:39.13:0,39,1040	0/0:13,0:13:39.13:0,39,1030	0/0:7,0:7:21.07:0,21,550	0/0:5,0:5:12.04:0,12,313	0/0:22,0:22:63.22:0,63,1614	0/0:12,0:12:36.12:0,36,960	0/0:9,0:9:27.09:0,27,696	0/0:15,0:15:45.14:0,45,1144	0/0:10,0:10:24.08:0,24,637	./.	0/0:5,0:5:15.05:0,15,400	0/0:2,0:2:6.02:0,6,160	0/0:9,0:9:24.08:0,24,640	0/0:16,0:15:42.14:0,42,1068	0/0:31,0:31:90.31:0,90,2380	0/0:19,0:19:54.15:0,54,1281
chr10	66821246	.	TTCTCTCTCTCTCTCTCTCTCTCTCTC	T	5302.61	PASS	AB=0.853;AC=32;AF=0.640;AN=50;BaseQRankSum=5.429;DP=425;FS=0.000;HRun=0;HaplotypeScore=216.0829;InbreedingCoeff=0.5737;MQ=48.75;MQ0=36;MQRankSum=-1.659;QD=24.10;ReadPosRankSum=-0.733;VQSLOD=3.2722;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:25:21.07:0,21,1522	0/0:4,0:5:12.04:0,12,759	0/1:10,0:5:0:0,0,0	./.	0/0:27,0:27:15.05:0,15,851	1/1:11,0:9:9.03:241,9,0	1/1:14,0:14:3.01:65,3,0	0/0:27,0:22:1.25:0,1,4	1/1:9,0:9:3.01:92,3,0	1/1:12,8:20:18.03:649,18,0	1/1:8,6:14:11.95:436,12,0	1/1:18,0:18:9.02:408,9,0	0/0:21,0:19:24.08:0,24,1493	1/1:6,0:6:6.02:103,6,0	1/1:11,8:19:9.03:585,9,0	1/1:7,4:10:3.01:202,3,0	0/0:17,0:17:3.01:0,3,80	0/1:7,0:12:33.11:135,0,33	1/1:9,5:11:15.04:584,15,0	1/1:12,7:19:15.01:821,15,0	1/1:13,0:11:5.76:154,6,0	./.	0/0:13,0:10:2.35:0,2,307	0/0:23,0:22:24.08:0,24,1738	1/1:4,8:10:6.02:404,6,0	./.	1/1:5,7:11:3.01:195,3,0	1/1:5,0:4:8.99:229,9,0
chr10	66821269	.	TC	T	662.80	PASS	AB=0.866;AC=16;AF=0.296;AN=54;BaseQRankSum=8.550;DP=361;FS=10.139;HRun=1;HaplotypeScore=69.5988;InbreedingCoeff=-0.1984;MQ=37.87;MQ0=74;MQRankSum=-6.990;QD=4.22;ReadPosRankSum=3.131;VQSLOD=-0.1866;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:21:27.55:0,28,335	0/0:9,0:9:24.96:0,25,305	./.	0/0:15,0:1:3.01:0,3,36	0/0:27,0:26:27.05:0,27,314	0/1:12,3:9:35.65:53,0,36	0/1:4,3:7:28.02:28,0,56	0/0:14,0:6:9.03:0,9,114	0/1:5,6:10:33.78:164,0,34	0/1:16,0:15:45.72:46,0,320	0/1:11,1:10:15.78:36,0,16	0/1:9,1:10:72.27:72,0,95	0/0:19,0:17:36.12:0,36,472	0/0:8,1:8:2.66:0,3,51	1/1:14,0:14:9.03:112,9,0	0/1:9,0:7:1.18:1,0,19	0/0:14,0:12:1.13:0,1,104	0/0:9,0:8:2.05:0,2,67	0/1:9,2:6:57.23:99,0,57	0/1:12,0:12:40.64:41,0,61	0/1:8,3:8:18.08:98,0,18	0/0:14,0:10:12.04:0,12,152	0/0:13,0:9:7.25:0,7,108	0/0:21,0:20:33.11:0,33,439	1/1:11,0:9:4.07:12,4,0	0/1:4,2:2:17.72:18,0,32	0/1:12,0:9:31.40:31,0,32	0/0:6,1:3:1.66:0,2,69
chr10	66821274	.	C	CTTTTC	1191.77	PASS	AB=0.942;AC=23;AF=0.442;AN=52;BaseQRankSum=3.770;DP=312;FS=0.000;HRun=0;HaplotypeScore=74.6691;InbreedingCoeff=0.2301;MQ=38.20;MQ0=75;MQRankSum=-3.642;QD=8.39;ReadPosRankSum=-0.550;VQSLOD=1.9087;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:19:20.21:0,20,393	0/0:9,0:9:27.09:0,27,449	./.	./.	0/0:21,0:20:17.91:0,18,309	1/1:13,0:7:0.87:56,1,0	1/1:5,0:5:0.53:53,1,0	0/0:11,0:3:6.01:0,6,78	1/1:8,0:7:13.06:282,13,0	0/1:9,0:8:57.95:105,0,58	0/1:10,0:7:22.05:72,0,22	1/1:5,0:5:11.99:147,12,0	0/0:18,0:16:33.04:0,33,544	0/1:9,0:8:0.71:18,0,1	1/1:11,0:11:9.03:131,9,0	0/0:6,0:4:3.01:0,3,34	0/1:4,7:11:35.26:35,0,45	0/1:8,0:7:2.79:3,0,37	0/1:10,0:6:22.09:143,0,22	0/1:7,0:7:41.84:42,0,56	1/1:13,0:10:6.41:173,6,0	0/0:9,0:5:3.01:0,3,52	0/0:11,0:7:4.40:0,4,98	0/0:21,0:20:27.09:0,27,488	0/0:11,0:9:6.02:0,6,68	1/1:9,0:6:3.48:50,3,0	1/1:12,0:9:3.01:43,3,0	0/0:6,0:2:2.59:0,3,35
chr10	66821489	.	GA	G	1704.13	PASS	AB=0.787;AC=31;AF=0.554;AN=56;BaseQRankSum=2.812;DP=432;FS=7.151;HRun=15;HaplotypeScore=63.5735;InbreedingCoeff=0.5817;MQ=68.78;MQ0=10;MQRankSum=0.024;QD=6.31;ReadPosRankSum=6.177;VQSLOD=2.2184;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:33:56.55:0,57,320	0/0:2,0:7:9.41:0,9,44	0/0:19,0:12:17.32:0,17,109	0/0:16,1:10:8.11:0,8,55	0/0:18,2:20:10.67:0,11,205	1/1:12,13:25:4.95:138,5,0	1/1:5,8:11:4.64:115,5,0	0/0:12,0:22:25.09:0,25,136	1/1:6,6:12:20.62:134,21,0	1/1:9,7:18:3.60:120,4,0	0/1:10,3:15:1.20:67,0,1	1/1:5,10:16:28.59:177,29,0	0/0:11,0:11:26.95:0,27,221	1/1:7,4:10:11.69:77,12,0	1/1:6,7:13:20.53:134,21,0	1/1:7,7:12:14.68:95,15,0	1/1:14,16:31:29.12:289,29,0	0/1:11,1:12:26.47:26,0,41	0/1:9,0:9:0.86:1,0,18	1/1:10,3:13:13.59:81,14,0	1/1:3,10:13:17.24:114,17,0	0/0:5,0:5:5.99:0,6,47	0/0:11,0:11:20.46:0,20,153	0/0:15,0:16:35.11:0,35,327	1/1:4,5:10:13.77:83,14,0	0/1:6,9:15:3.23:102,0,3	1/1:10,12:20:0.17:126,0,0	0/1:3,0:4:17.05:17,0,18
chr10	66823607	.	ATG	A	6955.02	PASS	AB=0.883;AC=39;AF=0.750;AN=52;BaseQRankSum=3.815;DP=785;FS=4.175;HRun=0;HaplotypeScore=118.8680;InbreedingCoeff=0.5137;MQ=54.49;MQ0=27;MQRankSum=1.523;QD=12.53;ReadPosRankSum=3.522;VQSLOD=4.2291;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:39:3.17:0,3,83	0/0:7,0:17:8.54:0,9,64	./.	./.	0/0:24,0:24:3.77:0,4,526	1/1:8,14:23:35.77:388,36,0	1/1:19,11:31:31.84:509,32,0	0/0:35,0:30:17.14:0,17,145	1/1:2,12:15:21.06:238,21,0	1/1:9,16:25:53.33:484,53,0	1/1:9,10:18:21.06:237,21,0	1/1:7,21:28:39.11:443,39,0	0/0:25,0:25:4.61:0,5,534	1/1:12,21:34:1.73:424,2,0	1/1:9,12:21:32.88:341,33,0	1/1:4,10:18:47.45:455,47,0	1/1:13,19:33:44.96:491,45,0	1/1:3,11:13:18.05:204,18,0	1/1:12,11:23:41.33:339,41,0	1/1:4,18:23:30.56:341,31,0	1/1:19,24:48:55.12:510,55,0	0/1:24,2:26:12.40:12,0,356	0/1:23,7:31:37.15:37,0,439	0/1:35,3:37:99:112,0,831	1/1:10,17:28:36.10:409,36,0	1/1:22,5:35:70.40:556,70,0	1/1:7,10:22:25.98:206,26,0	1/1:5,7:12:4.16:218,4,0
chr10	66823638	.	TGC	T	1798.69	PASS	AB=0.990;AC=25;AF=0.446;AN=56;BaseQRankSum=7.645;DP=705;FS=11.995;HRun=0;HaplotypeScore=138.8141;InbreedingCoeff=-0.4680;MQ=60.34;MQ0=17;MQRankSum=2.871;QD=3.17;ReadPosRankSum=7.355;VQSLOD=0.8500;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:29:12.09:231,12,0	0/1:13,0:13:14.10:14,0,45	0/1:16,0:3:1.80:2,0,2	0/0:28,0:12:10.87:0,11,83	0/1:20,3:23:99:192,0,180	0/1:27,0:26:81.75:82,0,162	0/1:35,1:36:99:106,0,170	1/1:22,0:18:4.70:238,5,0	0/1:16,0:16:10.47:54,0,10	0/1:30,0:30:54.31:54,0,155	0/1:15,0:13:19.59:65,0,20	0/1:26,0:26:58.85:98,0,59	0/0:19,0:19:44.95:0,45,681	0/1:31,0:29:75.15:111,0,75	0/1:23,1:24:76.89:77,0,177	0/1:21,0:21:50.36:73,0,50	0/1:32,0:32:96.73:98,0,97	0/1:19,0:18:15.79:16,0,136	0/1:29,1:29:41.13:41,0,198	0/1:21,0:21:5.95:95,0,6	0/1:42,0:42:99:102,0,179	0/0:19,0:19:23.68:0,24,442	0/0:23,0:23:20.91:0,21,515	0/0:48,0:47:70.38:0,70,1339	0/1:24,0:24:58.86:90,0,59	0/1:32,0:32:57.39:57,0,185	0/1:24,0:24:6.36:6,0,233	0/1:14,0:14:56.24:56,0,81
chr10	66824275	.	AGT	A	5441.23	PASS	AB=0.907;AC=41;AF=0.732;AN=56;BaseQRankSum=-0.382;DP=529;FS=13.895;HRun=0;HaplotypeScore=104.1150;InbreedingCoeff=0.6214;MQ=67.05;MQ0=12;MQRankSum=0.034;QD=15.82;ReadPosRankSum=5.198;VQSLOD=4.0183;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:16,0:18:12.29:99,0,12	1/1:5,0:5:2.92:17,3,0	0/0:53,1:25:31.38:0,31,370	0/0:62,0:32:48.11:0,48,673	0/0:17,0:17:6.02:0,6,96	1/1:10,5:15:2.78:228,3,0	1/1:13,2:15:24.07:286,24,0	1/1:15,0:28:29.29:142,29,0	1/1:19,5:27:41.72:417,42,0	1/1:11,2:13:29.30:329,29,0	1/1:11,3:14:9.01:107,9,0	1/1:10,5:15:27.08:324,27,0	0/1:13,2:15:5.90:6,0,377	1/1:7,2:9:17.95:198,18,0	1/1:9,7:16:42.11:486,42,0	1/1:7,5:12:24.06:275,24,0	1/1:15,5:20:38.72:460,39,0	1/1:10,5:15:8.12:295,8,0	1/1:11,3:13:8.83:137,9,0	1/1:16,4:20:39.08:448,39,0	1/1:13,4:16:6.02:72,6,0	0/0:9,0:9:12.02:0,12,166	0/0:13,0:13:20.69:0,21,319	0/0:30,0:29:72.20:0,72,1066	1/1:13,4:17:23.90:367,24,0	0/1:14,1:15:4.94:328,0,5	1/1:11,7:18:35.57:387,36,0	1/1:4,1:5:3.01:36,3,0
chr10	66824333	.	A	AGAGAGTGTGT	10904.06	PASS	AB=0.864;AC=35;AF=0.648;AN=54;BaseQRankSum=3.183;DP=544;FS=16.575;HRun=0;HaplotypeScore=140.9117;InbreedingCoeff=0.6001;MQ=60.68;MQ0=7;MQRankSum=-7.650;QD=27.26;ReadPosRankSum=-0.731;VQSLOD=3.4532;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:19,0:19:10.98:11,0,259	0/0:6,0:6:5.32:0,5,188	0/0:13,0:8:21.07:0,21,422	0/0:32,0:20:51.15:0,51,1071	0/0:12,0:12:12.38:0,12,255	1/1:11,20:35:9.03:255,9,0	1/1:5,21:31:5.61:302,6,0	0/1:35,0:35:99:179,0,1456	1/1:7,12:22:14.97:405,15,0	1/1:3,1:21:63.17:1957,63,0	1/1:4,0:9:2.96:138,3,0	1/1:6,2:18:18.06:681,18,0	0/0:11,0:11:27.09:0,27,821	1/1:2,10:14:5.66:173,6,0	1/1:4,1:20:8.72:452,9,0	1/1:7,1:24:20.64:749,21,0	1/1:8,1:22:27.05:919,27,0	1/1:6,0:14:13.57:690,14,0	1/1:11,0:24:60.95:1505,61,0	1/1:4,1:21:8.95:134,9,0	1/1:6,0:22:3.01:100,3,0	0/0:12,0:12:21.06:0,21,516	0/0:14,0:14:32.89:0,33,862	0/0:28,0:28:72.22:0,72,1781	./.	0/1:5,7:15:26.34:1069,0,26	1/1:4,0:22:24.08:1043,24,0	1/1:1,0:7:3.01:142,3,0
chr10	66824544	.	CA	C	1242.81	PASS	AB=0.676;AC=37;AF=0.661;AN=56;BaseQRankSum=1.547;DP=261;FS=5.992;HRun=15;HaplotypeScore=61.8816;InbreedingCoeff=0.3728;MQ=63.70;MQ0=16;MQRankSum=-0.587;QD=7.23;ReadPosRankSum=1.498;VQSLOD=2.6992;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:15:32.63:0,33,256	0/0:4,0:4:6:0,6,52	0/0:17,0:9:0:0,0,0	0/0:18,0:7:8.74:0,9,53	1/1:2,0:7:8.51:23,9,0	1/1:4,5:9:14.71:93,15,0	0/1:3,7:10:5.18:90,0,5	0/0:21,1:18:17.37:0,17,251	1/1:1,7:8:20.62:129,21,0	1/1:3,9:12:24.24:139,24,0	1/1:2,8:10:5.79:38,6,0	1/1:0,2:2:5.90:37,6,0	0/0:3,0:2:2.99:0,3,24	1/1:2,5:7:11.77:73,12,0	1/1:2,4:6:8.69:50,9,0	1/1:2,6:8:17.68:111,18,0	1/1:11,4:15:8.47:44,8,0	0/1:4,5:8:14.19:44,0,14	0/1:3,4:7:11.62:58,0,12	1/1:5,9:14:23.28:140,23,0	1/1:0,2:2:5.90:38,6,0	0/1:3,2:4:10.91:28,0,11	0/1:6,2:8:9.78:10,0,103	0/0:7,1:8:2.82:0,3,47	1/1:4,9:13:3.41:140,3,0	1/1:4,2:6:5.86:37,6,0	1/1:2,3:5:8.85:55,9,0	1/1:5,2:7:5.80:36,6,0
chr10	66824877	.	G	GA	33.77	PASS	AB=0.875;AC=9;AF=0.750;AN=12;BaseQRankSum=-0.956;DP=130;FS=3.332;HRun=0;HaplotypeScore=26.9819;MQ=45.74;MQ0=108;MQRankSum=-0.956;QD=0.80;ReadPosRankSum=0.322;VQSLOD=1.0653;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:13,2:3:3.01:38,3,0	./.	0/0:6,0:2:6.02:0,6,84	0/1:6,0:3:14.46:14,0,19	1/1:5,2:3:0.47:1,0,0	./.	./.	1/1:9,1:1:3.01:37,3,0	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	1/1:2,1:2:2.67:20,3,0	./.	./.	./.	./.	./.
chr10	66826135	.	G	GT	1527.51	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=-7.870;DP=424;FS=5.462;HRun=7;HaplotypeScore=41.8297;InbreedingCoeff=0.8886;MQ=79.47;MQ0=0;MQRankSum=-0.758;QD=22.46;ReadPosRankSum=-3.208;VQSLOD=1.8550;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,18:19:48.08:561,48,0	1/1:0,5:5:15.05:181,15,0	0/0:18,0:17:21.23:0,21,214	0/1:12,0:11:0.93:1,0,124	0/0:17,0:17:45.06:0,45,429	0/0:13,0:13:36.04:0,36,341	0/0:13,0:13:39.06:0,39,377	1/1:4,27:31:82.01:924,82,0	0/0:10,0:10:30.05:0,30,290	0/0:23,0:23:54.07:0,54,516	0/0:22,0:22:63.08:0,63,599	0/0:13,0:13:39.05:0,39,370	0/0:10,0:10:30.03:0,30,283	0/0:10,0:10:30.03:0,30,284	0/0:10,0:10:30.05:0,30,290	0/0:12,0:12:33.04:0,33,312	0/0:25,0:25:72.08:0,72,682	0/0:17,0:17:48.04:0,48,454	0/0:21,0:21:48.05:0,48,456	0/0:28,0:28:75.11:0,75,724	0/0:5,0:5:15:0,15,138	0/0:7,0:7:18.03:0,18,174	0/0:11,0:11:33.05:0,33,319	0/0:8,0:7:24.02:0,24,226	0/0:16,0:16:42.06:0,42,406	0/0:14,0:14:39.06:0,39,377	0/0:22,0:22:60.05:0,60,567	0/0:11,0:11:33.05:0,33,319
chr10	66826581	.	GA	G	4125.39	PASS	AB=0.783;AC=42;AF=0.750;AN=56;BaseQRankSum=5.211;DP=555;FS=31.563;HRun=13;HaplotypeScore=74.0899;InbreedingCoeff=0.2882;MQ=77.49;MQ0=4;MQRankSum=0.393;QD=8.20;ReadPosRankSum=4.374;VQSLOD=0.3798;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,20:29:35.51:268,36,0	1/1:0,5:5:8.85:66,9,0	0/1:30,0:15:13.80:28,0,14	0/1:30,0:18:0.16:0,0,39	0/0:20,1:21:33.22:0,33,442	1/1:6,14:23:42.80:315,43,0	1/1:2,10:12:32.81:241,33,0	1/1:10,0:26:19.64:70,20,0	1/1:10,12:21:0.55:166,1,0	1/1:7,13:20:5.37:162,5,0	1/1:6,7:14:29.55:190,30,0	1/1:5,3:8:17.83:130,18,0	0/0:18,0:18:36.02:0,36,335	0/1:4,12:16:0.88:129,0,1	1/1:3,16:19:28.26:255,28,0	1/1:3,12:17:33.87:231,34,0	1/1:10,22:33:25.27:326,25,0	1/1:3,11:15:31.86:225,32,0	0/1:10,11:21:84.90:172,0,85	1/1:7,11:18:32.65:233,33,0	0/1:5,12:17:5.55:91,0,6	0/0:13,0:13:11.66:0,12,204	0/1:17,2:20:28.11:28,0,194	0/1:20,2:25:22.34:22,0,362	1/1:4,16:21:25.59:180,26,0	1/1:12,13:28:19.63:252,20,0	0/1:8,13:21:12.10:164,0,12	1/1:2,9:12:25.87:181,26,0
chr10	66827939	.	GAGGAAGAAGAA	G	838.20	PASS	AB=1.000;AC=14;AF=0.259;AN=54;BaseQRankSum=9.251;DP=504;FS=12.048;HRun=0;HaplotypeScore=166.3948;InbreedingCoeff=0.0186;MQ=59.31;MQ0=12;MQRankSum=-5.465;QD=4.23;ReadPosRankSum=0.981;VQSLOD=1.9176;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,11:10:6.02:187,6,0	./.	0/0:17,0:10:23.87:0,24,732	0/1:17,0:10:6.05:6,0,610	0/0:14,0:14:42.14:0,42,1138	0/1:18,0:18:7.06:7,0,531	0/0:17,0:15:45.15:0,45,1419	1/1:2,6:6:18.06:475,18,0	0/0:31,0:30:2.80:0,3,1474	0/0:19,0:19:19.53:0,20,979	0/0:16,0:16:18.81:0,19,756	0/0:34,0:34:52.30:0,52,1969	0/0:20,0:18:54.16:0,54,2064	0/1:16,0:14:8.15:8,0,579	0/1:17,0:17:64.14:64,0,577	0/1:24,0:23:66.23:66,0,766	0/0:20,0:20:27.09:0,27,845	0/1:9,0:8:5.74:6,0,601	0/0:23,0:22:38.38:0,38,1792	0/1:22,0:21:19.56:20,0,1188	0/0:25,0:24:12.99:0,13,1753	0/0:14,0:14:39.13:0,39,1783	0/0:12,0:12:36.12:0,36,1234	0/0:39,0:38:99:0,111,5402	0/1:18,0:18:22.39:22,0,407	0/1:21,0:20:26.25:26,0,1182	0/1:17,0:17:99:106,0,715	0/0:5,0:5:15.05:0,15,520
chr10	66827947	.	AGAAGAGGAGGAGGAGGAG	A	7678.76	PASS	AB=0.615;AC=37;AF=0.740;AN=50;BaseQRankSum=6.185;DP=490;FS=2.089;HRun=0;HaplotypeScore=185.0578;InbreedingCoeff=0.5154;MQ=57.35;MQ0=23;MQRankSum=-1.934;QD=20.53;ReadPosRankSum=-0.490;VQSLOD=3.9880;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	0/0:14,0:7:1.82:0,2,5	1/1:11,0:11:9:77,9,0	1/1:5,14:18:3.01:147,3,0	1/1:19,0:17:26.80:525,27,0	1/1:8,0:6:3.06:8,3,0	0/1:14,18:31:22.31:275,0,22	1/1:4,15:17:38.87:757,39,0	1/1:4,12:15:12.04:357,12,0	0/1:14,19:33:9.38:79,0,9	0/0:17,0:15:26.34:0,26,1225	1/1:6,10:14:3.48:149,3,0	0/1:4,12:16:4.91:430,0,5	1/1:8,15:21:15.05:689,15,0	1/1:8,16:23:3.01:91,3,0	1/1:8,0:7:12.03:262,12,0	1/1:12,9:19:23.98:394,24,0	1/1:5,12:16:26.82:613,27,0	1/1:26,0:24:41.58:440,42,0	0/0:12,0:12:30.08:0,30,1188	0/0:10,0:9:12.50:0,12,486	0/0:39,0:38:84.12:0,84,3252	1/1:3,17:20:12.04:446,12,0	1/1:7,17:23:45.09:1161,45,0	1/1:5,12:17:15.05:737,15,0	1/1:5,0:5:5.96:43,6,0
chr10	66828269	.	GCACA	G	143.57	PASS	AB=0.924;AC=7;AF=0.152;AN=46;BaseQRankSum=1.899;DP=461;FS=8.142;HRun=0;HaplotypeScore=122.8473;InbreedingCoeff=0.2403;MQ=46.31;MQ0=10;MQRankSum=-0.877;QD=1.45;ReadPosRankSum=1.146;VQSLOD=1.7428;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:26:3:28,3,0	1/1:11,0:11:9:97,9,0	./.	./.	./.	0/0:10,0:9:6.01:0,6,98	0/0:23,0:24:29.81:0,30,497	./.	0/0:17,0:17:13.99:0,14,117	0/0:16,0:16:8.98:0,9,108	0/0:11,0:11:2.60:0,3,43	0/0:12,0:12:9.02:0,9,148	0/1:19,1:20:25.06:25,0,335	0/0:9,0:9:12.51:0,13,252	0/0:23,0:24:20.81:0,21,379	0/0:18,0:18:26.56:0,27,492	0/0:24,0:23:24.44:0,24,437	0/0:9,0:10:15.26:0,15,284	0/0:13,0:13:5.89:0,6,86	0/0:12,0:11:3.01:0,3,70	0/0:27,0:27:7.98:0,8,84	0/0:23,0:24:23.82:0,24,453	./.	0/1:14,3:18:74.46:74,0,159	0/0:17,0:17:15.05:0,15,312	0/1:23,0:22:39.65:40,0,291	0/0:14,0:11:18.04:0,18,344	0/0:5,0:5:11.78:0,12,195
chr10	66829777	.	G	GA	14600.86	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-11.164;DP=563;FS=0.458;HRun=6;HaplotypeScore=49.5625;InbreedingCoeff=0.9969;MQ=82.10;MQ0=0;MQRankSum=-2.184;QD=31.20;ReadPosRankSum=0.229;VQSLOD=5.0981;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,24:28:38.89:747,39,0	1/1:2,9:11:24.08:302,24,0	0/0:14,0:14:17.24:0,17,207	0/0:17,0:17:29.75:0,30,274	1/1:2,22:24:66.02:756,66,0	1/1:3,14:17:36.12:453,36,0	1/1:1,10:11:30.10:377,30,0	1/1:3,24:27:72.21:890,72,0	1/1:4,23:27:60.19:755,60,0	1/1:2,23:26:72.20:887,72,0	1/1:4,22:26:63.16:775,63,0	1/1:1,16:17:42.13:528,42,0	0/0:14,0:14:39.09:0,39,397	1/1:1,20:21:54.17:679,54,0	1/1:2,18:20:48.15:604,48,0	1/1:0,21:21:57.18:717,57,0	1/1:1,26:27:75.24:943,75,0	1/1:2,16:18:50.19:609,50,0	1/1:3,19:22:57.16:684,57,0	1/1:1,20:21:60.14:736,60,0	1/1:3,22:25:57.18:717,57,0	0/0:16,0:16:45.09:0,45,454	0/0:13,0:13:24.05:0,24,245	0/0:21,0:21:60.14:0,60,612	1/1:1,22:23:60.19:755,60,0	1/1:2,14:16:42.13:516,42,0	1/1:4,24:27:60.19:755,60,0	1/1:0,12:12:33.11:415,33,0
chr10	66830023	.	C	CT	4344.70	PASS	AB=0.621;AC=40;AF=0.714;AN=56;BaseQRankSum=-4.474;DP=526;FS=4.627;HRun=13;HaplotypeScore=70.2382;InbreedingCoeff=0.4931;MQ=75.46;MQ0=1;MQRankSum=-1.916;QD=10.57;ReadPosRankSum=0.502;VQSLOD=4.4458;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,1:26:29.76:160,30,0	1/1:1,0:4:8.64:48,9,0	0/0:32,0:18:9.73:0,10,115	0/0:18,0:11:10.17:0,10,54	1/1:11,18:32:10.29:343,10,0	1/1:7,16:23:11.03:289,11,0	1/1:10,6:17:15.05:247,15,0	1/1:21,0:29:37.90:177,38,0	1/1:12,7:20:35.94:311,36,0	1/1:6,11:17:6.44:199,6,0	1/1:6,14:22:15.39:259,15,0	0/1:5,11:16:11.57:47,0,12	0/0:16,0:16:30.88:0,31,207	1/1:2,10:12:26.83:236,27,0	1/1:7,11:18:3.98:175,4,0	0/1:7,9:17:34.31:174,0,34	1/1:5,11:17:0.27:128,0,0	0/1:6,9:15:17.13:143,0,17	1/1:13,18:31:31.54:389,32,0	0/1:9,10:21:21.49:218,0,21	1/1:4,3:7:11.67:89,12,0	0/0:9,0:9:17.76:0,18,118	0/0:15,0:18:30.71:0,31,197	0/0:21,0:21:36.25:0,36,231	1/1:3,12:15:15.02:140,15,0	1/1:2,14:18:20.85:277,21,0	1/1:3,14:17:7.90:178,8,0	1/1:2,8:12:0.12:119,0,0
chr10	66833205	.	AATTATT	A	793.89	PASS	AB=0.917;AC=21;AF=0.750;AN=28;BaseQRankSum=3.179;DP=237;FS=0.000;HRun=0;HaplotypeScore=65.7237;InbreedingCoeff=0.3265;MQ=79.89;MQ0=5;MQRankSum=-1.445;QD=7.42;ReadPosRankSum=0.809;VQSLOD=1.0910;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:7,0:10:6.02:84,6,0	./.	./.	./.	./.	0/0:4,0:4:2.99:0,3,24	./.	0/0:31,0:30:4.81:0,5,30	1/1:2,0:4:6.02:84,6,0	./.	./.	1/1:4,1:5:6.01:85,6,0	0/0:9,0:8:9.03:0,9,288	1/1:8,0:10:6.02:84,6,0	./.	./.	1/1:12,2:13:3.01:60,3,0	1/1:15,0:15:6.02:103,6,0	1/1:6,0:6:6:52,6,0	./.	./.	./.	./.	./.	1/1:8,1:9:3.01:60,3,0	1/1:11,1:12:6.01:120,6,0	1/1:10,1:11:3.01:60,3,0	0/1:10,1:9:10.97:111,0,11
chr10	66833272	.	G	GA	5210.71	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=4.067;DP=226;FS=25.870;HRun=1;HaplotypeScore=47.7210;InbreedingCoeff=0.8046;MQ=73.70;MQ0=4;MQRankSum=-0.841;QD=29.61;ReadPosRankSum=4.489;VQSLOD=3.0948;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,13:13:30.05:371,30,0	1/1:0,3:3:9.03:112,9,0	0/0:24,0:14:19.60:0,20,158	0/0:8,0:5:8.97:0,9,90	1/1:0,6:6:9.03:118,9,0	1/1:0,4:4:12.04:157,12,0	1/1:1,0:1:3.01:39,3,0	1/1:1,8:9:24.07:296,24,0	1/1:0,9:9:21.06:271,21,0	1/1:0,8:8:24.07:304,24,0	1/1:0,7:7:15.05:192,15,0	1/1:1,7:8:15.05:194,15,0	0/0:7,0:7:18.06:0,18,250	1/1:1,9:10:24.01:292,24,0	1/1:0,4:4:9.03:118,9,0	1/1:1,4:5:12.04:156,12,0	1/1:0,14:14:30.10:382,30,0	1/1:1,11:12:29.83:358,30,0	1/1:0,12:12:36.12:472,36,0	1/1:0,5:5:6.01:74,6,0	1/1:1,8:9:15.05:196,15,0	0/0:1,0:1:3.01:0,3,42	0/0:6,0:6:5.84:0,6,120	0/0:4,0:4:12.04:0,12,166	1/1:1,7:8:18.06:234,18,0	1/1:0,11:11:33.10:420,33,0	1/1:2,8:10:22.56:258,23,0	1/1:2,6:7:15.05:197,15,0
chr10	66833581	.	CA	C	7025.44	PASS	AB=1.000;AC=39;AF=0.696;AN=56;BaseQRankSum=-4.864;DP=503;FS=11.295;HRun=10;HaplotypeScore=58.4958;InbreedingCoeff=0.8802;MQ=85.41;MQ0=0;MQRankSum=-2.035;QD=19.79;ReadPosRankSum=5.499;VQSLOD=4.8037;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:21:45.65:0,46,246	0/0:1,0:6:11.52:0,12,69	0/0:29,2:27:24.27:0,24,468	0/0:19,0:15:12.87:0,13,125	1/1:1,22:23:56.97:495,57,0	1/1:1,14:15:32.99:287,33,0	1/1:4,10:14:23.99:208,24,0	0/0:11,0:35:80.68:0,81,462	1/1:2,16:18:5.81:279,6,0	1/1:0,18:18:50.99:443,51,0	1/1:2,26:28:74.98:651,75,0	1/1:4,15:19:44.98:388,45,0	0/0:11,1:12:10.03:0,10,330	1/1:0,16:16:38.99:339,39,0	1/1:1,24:25:62.98:547,63,0	1/1:2,11:13:32.98:286,33,0	1/1:6,21:27:56.98:495,57,0	1/1:1,16:17:35.99:312,36,0	1/1:3,13:16:38.99:339,39,0	1/1:0,20:21:49.98:423,50,0	1/1:4,10:14:29.99:260,30,0	0/0:10,0:10:30.07:0,30,325	0/0:14,0:14:39.09:0,39,417	0/1:12,0:12:17.39:17,0,227	1/1:1,11:12:23.99:208,24,0	1/1:1,17:18:50.99:443,51,0	1/1:1,21:22:50.99:443,51,0	1/1:0,6:7:20.03:162,20,0
chr10	66834180	.	TTGTGTGTGTGTGTG	T	7464.54	PASS	AB=0.727;AC=33;AF=0.589;AN=56;BaseQRankSum=9.219;DP=434;FS=7.394;HRun=0;HaplotypeScore=156.2756;InbreedingCoeff=0.5602;MQ=58.60;MQ0=7;MQRankSum=-7.808;QD=29.39;ReadPosRankSum=2.871;VQSLOD=2.9866;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:33:48.14:0,48,2561	0/0:3,0:5:6.02:0,6,287	0/0:19,0:10:4.23:0,4,25	0/0:21,0:14:3.01:0,3,91	0/0:9,0:19:29.13:0,29,1302	1/1:4,7:10:3.01:118,3,0	1/1:6,5:11:3.01:118,3,0	0/0:21,0:20:21.01:0,21,438	0/1:5,7:12:33.80:342,0,34	0/1:15,11:27:76.85:824,0,77	1/1:4,0:5:3.01:98,3,0	1/1:6,8:13:21.07:816,21,0	0/0:17,0:17:30.10:0,30,1814	1/1:0,7:7:15:491,15,0	1/1:7,10:17:21.07:816,21,0	1/1:9,0:17:18.06:346,18,0	1/1:9,4:13:3.01:118,3,0	0/1:10,2:12:27.06:109,0,27	1/1:19,5:23:7.12:324,7,0	1/1:11,12:24:21.07:805,21,0	1/1:10,4:14:3.01:118,3,0	0/0:15,0:15:36.11:0,36,2208	0/0:11,0:11:18.06:0,18,1154	0/0:18,0:18:30.10:0,30,1811	1/1:4,5:9:6.02:228,6,0	1/1:9,8:18:21.92:622,22,0	1/1:2,10:12:21.07:826,21,0	1/1:5,2:6:9.03:347,9,0
chr10	66835558	.	G	GA	1867.90	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-9.521;DP=524;FS=1.693;HRun=8;HaplotypeScore=55.4712;InbreedingCoeff=0.9945;MQ=65.94;MQ0=1;MQRankSum=1.779;QD=26.31;ReadPosRankSum=-2.071;VQSLOD=3.6401;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,30:31:69.21:796,69,0	1/1:0,10:10:27.08:312,27,0	0/0:15,0:13:26.18:0,26,216	0/0:13,0:11:29.57:0,30,259	0/0:24,0:24:45.49:0,45,249	0/0:21,0:21:57.02:0,57,522	0/0:15,0:15:45.01:0,45,407	1/1:1,29:30:81.20:903,81,0	0/0:12,0:12:30:0,30,270	0/0:31,0:31:78.03:0,78,711	0/0:25,0:25:59.92:0,60,532	0/0:10,0:10:27.01:0,27,247	0/0:17,0:17:45.02:0,45,411	0/0:17,0:17:42.01:0,42,380	0/0:16,0:16:44.98:0,45,403	0/0:16,0:16:48.03:0,48,439	0/0:24,0:24:37.46:0,37,592	0/0:10,0:10:18.01:0,18,165	0/0:17,0:17:45.01:0,45,404	0/0:25,0:25:66.03:0,66,603	0/0:16,0:16:38.99:0,39,351	0/0:14,0:14:30:0,30,274	0/0:14,0:15:38.05:0,38,335	0/0:19,0:19:48.02:0,48,439	0/0:12,0:12:23.94:0,24,210	0/0:27,0:27:66.03:0,66,603	0/0:20,0:20:56.98:0,57,513	0/0:22,0:22:60.03:0,60,549
chr10	66843281	.	A	AG	2122.87	PASS	AC=40;AF=0.870;AN=46;BaseQRankSum=2.845;DP=143;FS=0.000;HRun=5;HaplotypeScore=21.8603;InbreedingCoeff=0.4349;MQ=23.38;MQ0=50;MQRankSum=1.206;QD=19.12;ReadPosRankSum=-3.243;VQSLOD=1.3030;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,3:3:9.03:118,9,0	1/1:3,2:2:6.02:79,6,0	./.	./.	1/1:3,1:1:3.01:39,3,0	1/1:4,4:4:12.04:157,12,0	1/1:1,2:2:6.02:79,6,0	1/1:4,5:7:18.06:234,18,0	1/1:2,2:2:3.01:39,3,0	1/1:1,5:6:12.04:158,12,0	1/1:3,3:2:6.02:79,6,0	1/1:3,1:1:3.01:39,3,0	0/0:7,0:6:5.94:0,6,64	1/1:1,4:3:9.03:117,9,0	1/1:2,2:2:6.02:79,6,0	1/1:1,3:3:9.03:118,9,0	./.	./.	1/1:3,3:3:6.02:79,6,0	1/1:2,3:3:9.03:118,9,0	1/1:2,2:2:6.02:79,6,0	./.	0/0:9,0:6:9.02:0,9,97	0/0:11,0:2:3.01:0,3,32	1/1:1,7:7:18.06:237,18,0	1/1:1,7:8:21.07:276,21,0	1/1:1,2:1:3.01:39,3,0	1/1:5,2:6:6.02:79,6,0
chr10	66843358	.	T	TAA	3730.24	PASS	AB=0.857;AC=41;AF=0.732;AN=56;BaseQRankSum=5.686;DP=288;FS=11.797;HRun=9;HaplotypeScore=72.8076;InbreedingCoeff=0.6745;MQ=40.25;MQ0=10;MQRankSum=-2.864;QD=15.74;ReadPosRankSum=-0.497;VQSLOD=0.5646;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,0:8:5.80:41,6,0	0/1:1,1:4:8.91:65,0,9	0/0:9,0:6:11.99:0,12,116	0/0:7,0:3:6.01:0,6,64	1/1:10,6:15:8.55:103,9,0	1/1:4,9:13:20.81:287,21,0	1/1:4,3:6:6.02:91,6,0	0/1:18,0:16:4.05:4,0,39	1/1:5,3:7:18.02:246,18,0	1/1:20,4:25:33.24:353,33,0	1/1:7,1:11:14.56:125,15,0	1/1:2,3:4:9:112,9,0	0/0:10,0:10:20.92:0,21,223	1/1:4,2:5:6.02:92,6,0	1/1:4,4:7:12.04:182,12,0	1/1:5,6:11:14.62:221,15,0	1/1:2,3:5:8.39:93,8,0	0/1:1,0:1:0:0,0,0	1/1:9,7:17:29.11:386,29,0	1/1:5,5:13:26.97:323,27,0	1/1:6,1:6:8.94:85,9,0	0/0:7,0:7:14.86:0,15,158	0/0:7,0:7:12.01:0,12,128	0/0:11,0:6:15.04:0,15,160	1/1:10,4:14:23.85:285,24,0	1/1:7,4:11:12.28:206,12,0	1/1:3,7:9:9.03:137,9,0	1/1:6,6:13:21:292,21,0
chr10	66843367	.	AG	A	2217.82	PASS	AB=0.950;AC=42;AF=0.750;AN=56;BaseQRankSum=5.651;DP=281;FS=16.682;HRun=1;HaplotypeScore=58.7853;InbreedingCoeff=0.7909;MQ=44.48;MQ0=6;MQRankSum=-2.688;QD=10.13;ReadPosRankSum=1.035;VQSLOD=-0.0788;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:8,1:8:1.18:22,0,1	0/1:4,0:4:0.70:14,0,1	0/0:13,0:9:21.64:0,22,218	0/0:12,0:5:14.70:0,15,144	1/1:13,2:14:25:160,25,0	1/1:11,1:12:23.17:120,23,0	1/1:4,1:4:5.83:22,6,0	1/1:20,1:19:15.38:252,15,0	1/1:8,0:8:14.96:82,15,0	1/1:20,1:21:42.27:287,42,0	1/1:8,3:10:20.41:140,20,0	1/1:5,1:5:8.62:63,9,0	0/0:11,0:11:30.13:0,30,335	1/1:5,0:4:9.33:57,9,0	1/1:7,1:7:12.53:74,13,0	1/1:8,3:11:17.71:107,18,0	1/1:6,1:7:11.94:105,12,0	1/1:1,0:1:0.47:1,0,0	1/1:11,2:13:29.30:155,29,0	1/1:12,0:12:29.81:157,30,0	1/1:6,0:6:12.34:82,12,0	0/0:9,0:9:23.77:0,24,267	0/0:7,0:7:15.04:0,15,184	0/0:10,0:5:15.05:0,15,199	1/1:9,1:10:26.33:179,26,0	1/1:8,1:8:20.54:109,21,0	1/1:12,1:12:17.42:108,17,0	1/1:12,0:12:20.53:107,21,0
chr10	66843865	.	GATATAT	G	93.39	PASS	AB=0.700;AC=5;AF=0.313;AN=16;BaseQRankSum=0.000;DP=110;FS=3.332;HRun=0;HaplotypeScore=25.3269;MQ=75.64;MQ0=0;MQRankSum=-0.467;QD=3.89;ReadPosRankSum=0.869;VQSLOD=0.8950;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	./.	./.	0/0:2,0:2:3.01:0,3,39	0/0:10,0:10:2.60:0,3,10	./.	./.	0/0:2,0:2:3.01:0,3,95	./.	1/1:1,2:3:3.01:61,3,0	./.	./.	./.	0/1:8,3:14:78.34:106,0,78	1/1:4,0:7:1.25:3,1,0	./.	./.	./.	./.	./.	./.	./.	./.	0/0:1,0:2:3.01:0,3,38	0/0:10,0:10:3.01:0,3,69
chr10	66843907	.	TACAC	T	340.36	PASS	AB=1.000;AC=4;AF=0.111;AN=36;BaseQRankSum=-1.111;DP=76;FS=3.510;HRun=0;HaplotypeScore=21.8505;InbreedingCoeff=0.2012;MQ=71.16;MQ0=1;MQRankSum=3.415;QD=20.02;ReadPosRankSum=-1.545;VQSLOD=2.7089;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/1:4,0:1:0:0,0,0	0/0:10,0:6:10.03:0,10,85	0/0:5,0:5:9.03:0,9,167	0/0:1,0:1:3.01:0,3,48	0/0:2,0:2:6.02:0,6,84	1/1:2,9:10:27.09:422,27,0	0/0:3,0:2:3.01:0,3,48	./.	0/0:2,0:2:6.02:0,6,132	0/0:1,0:1:3.01:0,3,49	0/0:4,0:4:5.05:0,5,54	./.	0/0:1,0:1:3.01:0,3,48	0/0:1,0:1:3.01:0,3,50	0/0:13,0:13:11.25:0,11,135	0/0:6,0:6:10.59:0,11,151	0/0:3,0:3:6.02:0,6,90	./.	./.	./.	./.	./.	0/0:2,0:2:6.02:0,6,81	./.	0/0:2,0:2:3.01:0,3,42	0/1:2,0:2:12.16:12,0,40
chr10	66843985	.	C	CATAT	3573.22	PASS	AC=32;AF=0.762;AN=42;BaseQRankSum=-2.425;DP=152;FS=2.975;HRun=0;HaplotypeScore=33.3110;InbreedingCoeff=0.5992;MQ=74.52;MQ0=2;MQRankSum=-1.678;QD=33.39;ReadPosRankSum=0.196;VQSLOD=2.7804;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,0:10:11.19:51,11,0	./.	0/0:6,0:3:3.01:0,3,33	0/0:16,0:7:4.07:0,4,65	1/1:1,4:5:3.01:76,3,0	1/1:1,3:4:3.01:76,3,0	./.	1/1:6,0:21:42.55:226,43,0	./.	1/1:0,3:3:9.03:229,9,0	./.	1/1:1,0:1:3.01:75,3,0	0/0:5,0:5:15.03:0,15,231	./.	1/1:1,0:1:3.01:40,3,0	1/1:0,5:5:12.04:304,12,0	1/1:1,14:16:24.08:609,24,0	1/1:1,8:9:24.03:552,24,0	1/1:4,6:9:18.06:440,18,0	1/1:2,0:2:3.01:49,3,0	1/1:0,2:3:6.02:152,6,0	./.	0/0:4,0:4:12.03:0,12,181	0/0:2,0:2:6.02:0,6,97	./.	1/1:0,4:5:11.83:238,12,0	1/1:0,6:7:12.04:305,12,0	1/1:0,5:5:6.02:152,6,0
chr10	66844271	.	G	GGTACATTGTTCTTTAGATCTTGGAGAGACCTT	72383.79	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=3.976;DP=497;FS=1.075;HRun=0;HaplotypeScore=298.3503;InbreedingCoeff=0.9336;MQ=61.21;MQ0=1;MQRankSum=-11.508;QD=170.72;ReadPosRankSum=0.455;VQSLOD=3.8615;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:25:48.16:4213,48,0	1/1:10,0:10:30.09:2052,30,0	0/0:13,0:13:35.89:0,36,1069	0/0:7,0:7:8.21:0,8,532	1/1:14,2:30:45.02:3234,45,0	1/1:17,1:35:51.13:5150,51,0	1/1:19,0:19:57.18:3838,57,0	1/1:42,0:41:99:6128,111,0	1/1:23,0:23:69.17:7157,69,0	1/1:23,0:23:69.21:5917,69,0	1/1:8,1:17:26.96:1979,27,0	1/1:12,0:12:36.11:3057,36,0	0/0:13,0:13:33.11:0,33,2160	1/1:4,2:18:15.05:1486,15,0	1/1:19,0:19:51.14:3852,51,0	1/1:8,3:24:33.11:3410,33,0	1/1:6,1:12:15.01:1424,15,0	1/1:2,0:2:3.01:53,3,0	1/1:11,0:11:33.11:2624,33,0	1/1:6,1:15:21.03:1383,21,0	1/1:7,0:7:15.03:486,15,0	0/0:5,0:5:15.04:0,15,853	0/0:20,0:20:51.15:0,51,2999	0/0:15,0:15:42.14:0,42,2987	1/1:4,3:14:21.07:2430,21,0	1/1:7,1:17:48.64:4576,49,0	1/1:23,3:41:75.69:7216,76,0	1/1:5,0:5:15.02:719,15,0
chr10	66844274	.	A	AC	150.70	PASS	AB=0.980;AC=12;AF=0.214;AN=56;BaseQRankSum=5.136;DP=395;FS=15.680;HRun=0;HaplotypeScore=74.8428;InbreedingCoeff=-0.0983;MQ=63.04;MQ0=1;MQRankSum=-4.155;QD=0.82;ReadPosRankSum=-0.280;VQSLOD=0.2205;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:22,5:27:15.35:15,0,137	0/0:11,0:11:16.25:0,16,131	0/0:12,0:12:36.09:0,36,453	0/0:5,0:5:14.91:0,15,159	0/1:15,0:15:0.26:0,0,52	0/0:20,0:20:28.27:0,28,262	0/1:20,0:20:42.57:43,0,74	0/1:40,0:39:69.33:69,0,670	0/0:23,0:23:16.32:0,16,92	0/1:23,1:24:82.48:82,0,365	0/0:12,0:12:2.83:0,3,52	0/0:12,0:12:10.45:0,10,93	0/0:11,0:11:33.11:0,33,461	1/1:7,0:7:5.19:20,5,0	0/1:19,0:19:11.27:11,0,22	0/1:12,0:12:12.65:13,0,45	0/1:6,0:5:1.40:1,0,32	0/0:3,0:3:3.90:0,4,43	0/0:13,0:13:23.53:0,24,279	0/0:9,0:8:1.57:0,2,78	0/1:6,0:6:14.63:15,0,39	0/0:5,0:5:15.04:0,15,196	0/0:19,0:19:51.16:0,51,697	0/0:15,0:15:45.14:0,45,612	0/1:8,0:8:9.36:18,0,9	0/0:9,0:9:16.62:0,17,261	0/0:27,0:27:23.16:0,23,375	0/0:5,0:5:5.22:0,5,26
chr10	66845538	.	CAAA	C	5492.33	PASS	AB=0.604;AC=38;AF=0.679;AN=56;BaseQRankSum=5.540;DP=436;FS=4.321;HRun=14;HaplotypeScore=79.4359;InbreedingCoeff=0.8147;MQ=51.38;MQ0=11;MQRankSum=-3.079;QD=16.54;ReadPosRankSum=2.157;VQSLOD=4.0083;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:31:84.16:0,84,1326	0/0:14,0:14:36.12:0,36,630	0/0:11,0:4:9.02:0,9,108	0/0:8,0:1:3.01:0,3,45	0/1:3,1:11:11.12:11,0,138	1/1:2,9:11:11.56:199,12,0	1/1:0,12:13:25.37:311,25,0	0/1:9,1:21:0.93:1,0,213	1/1:3,11:15:33.84:370,34,0	1/1:3,17:19:42.90:476,43,0	1/1:6,6:13:19.03:206,19,0	1/1:4,5:9:17.99:188,18,0	0/0:9,0:11:28.11:0,28,396	1/1:5,12:16:23.71:278,24,0	1/1:4,22:25:41.91:535,42,0	1/1:5,9:14:32.35:349,32,0	1/1:7,20:26:33.71:473,34,0	1/1:3,16:20:26.97:298,27,0	1/1:8,13:22:30.70:392,31,0	1/1:3,11:14:23.98:280,24,0	1/1:3,12:17:15.10:202,15,0	0/0:7,0:7:18.04:0,18,305	0/0:7,0:6:15.01:0,15,245	0/0:14,0:13:36.07:0,36,614	1/1:1,10:12:13.59:171,14,0	1/1:2,15:17:40.32:438,40,0	1/1:5,14:18:17.81:210,18,0	1/1:5,3:7:8.93:105,9,0
chr10	66845550	.	AAAG	A	1956.66	PASS	AB=0.981;AC=23;AF=0.411;AN=56;BaseQRankSum=12.799;DP=467;FS=0.000;HRun=0;HaplotypeScore=91.8202;InbreedingCoeff=-0.1316;MQ=59.15;MQ0=11;MQRankSum=-3.309;QD=5.79;ReadPosRankSum=6.275;VQSLOD=1.6518;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:76.93:0,77,1239	0/0:15,0:15:41.29:0,41,600	0/0:20,0:9:9.24:0,9,123	0/1:17,0:7:25.64:26,0,48	0/1:15,0:14:1.10:1,0,238	0/1:11,0:11:0.37:66,0,0	1/1:13,0:13:23.83:160,24,0	0/0:25,0:25:52.96:0,53,485	0/1:18,0:18:49.07:154,0,49	0/1:25,0:24:85.41:140,0,85	0/1:8,2:10:5.69:101,0,6	0/1:8,1:9:10.10:112,0,10	0/0:10,0:10:23.34:0,23,311	0/1:15,0:14:14.90:92,0,15	0/1:29,0:28:31.06:223,0,31	0/1:15,1:16:30.71:165,0,31	1/1:23,1:23:21.54:232,22,0	0/1:20,0:20:14.69:103,0,15	0/1:25,0:24:88.03:88,0,152	0/1:13,0:13:40.94:123,0,41	0/1:16,0:16:36.36:36,0,37	0/0:7,0:7:18.52:0,19,297	0/0:7,0:6:17.71:0,18,227	0/0:13,0:12:32.76:0,33,547	0/1:14,0:14:50.69:51,0,51	0/1:27,0:24:99:126,0,155	0/1:17,0:16:0.26:74,0,0	1/1:4,0:3:8.58:53,9,0
chr10	66848964	.	GT	G	9059.76	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=5.162;DP=421;FS=10.087;HRun=8;HaplotypeScore=63.6685;InbreedingCoeff=0.9525;MQ=74.00;MQ0=0;MQRankSum=-5.558;QD=25.10;ReadPosRankSum=1.335;VQSLOD=5.3032;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,11:13:30.05:290,30,0	1/1:1,5:6:15.02:145,15,0	0/0:9,0:9:24.07:0,24,280	0/0:11,0:11:3.44:0,3,245	1/1:1,29:30:84.13:811,84,0	1/1:3,14:17:39.05:376,39,0	1/1:1,5:6:15.02:145,15,0	1/1:3,29:32:87.12:834,87,0	1/1:3,12:15:39.04:370,39,0	1/1:3,14:17:45.07:434,45,0	1/1:2,16:18:45.06:434,45,0	1/1:4,7:11:21.03:203,21,0	0/0:13,0:13:36.08:0,36,420	1/1:0,10:10:30.05:290,30,0	1/1:0,12:12:36.06:348,36,0	1/1:1,17:18:48.06:457,48,0	1/1:1,8:9:24.04:232,24,0	1/1:1,8:9:27.01:253,27,0	1/1:0,23:23:69.10:660,69,0	1/1:3,23:26:63.09:608,63,0	1/1:1,6:7:15.02:145,15,0	0/0:9,0:9:27.08:0,27,326	0/0:11,0:11:33.10:0,33,399	0/0:7,0:7:21.05:0,21,241	1/1:2,15:17:36.05:348,36,0	1/1:0,19:19:51.08:492,51,0	1/1:3,33:36:99:985,102,0	1/1:0,10:10:21.03:203,21,0
chr10	66849026	.	CAT	C	14411.25	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=9.602;DP=399;FS=16.007;HRun=0;HaplotypeScore=93.9199;InbreedingCoeff=0.9857;MQ=61.89;MQ0=0;MQRankSum=-11.049;QD=44.62;ReadPosRankSum=1.786;VQSLOD=4.6057;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,12:15:45.11:672,45,0	1/1:0,5:5:15.05:241,15,0	0/0:12,0:11:33.10:0,33,636	0/0:5,0:5:15.05:0,15,292	0/0:25,0:25:75.19:0,75,1373	1/1:1,20:21:57.19:912,57,0	1/1:3,8:11:27.01:379,27,0	1/1:3,30:33:92.93:1350,93,0	1/1:1,13:14:42.13:653,42,0	1/1:3,19:22:66.22:1037,66,0	1/1:1,17:18:54.15:839,54,0	1/1:0,9:9:27.09:434,27,0	0/0:8,0:8:24.08:0,24,487	1/1:0,8:8:24.08:385,24,0	1/1:2,16:18:54.12:815,54,0	1/1:1,14:15:45.15:712,45,0	1/1:1,6:7:18.06:290,18,0	1/1:1,7:8:24.04:360,24,0	1/1:2,19:21:57.15:886,57,0	1/1:0,12:12:36.12:563,36,0	1/1:1,6:7:15.03:216,15,0	0/0:8,0:8:24.08:0,24,487	0/0:11,0:11:33.11:0,33,658	0/0:7,0:7:21.03:0,21,367	1/1:1,10:11:33.08:503,33,0	1/1:0,28:27:81.28:1299,81,0	1/1:2,32:34:99:1574,102,0	1/1:0,6:6:18.06:290,18,0
chr10	66849053	.	ATTT	A	7306.94	PASS	AB=0.621;AC=37;AF=0.661;AN=56;BaseQRankSum=4.668;DP=408;FS=7.989;HRun=14;HaplotypeScore=119.5762;InbreedingCoeff=0.8660;MQ=60.81;MQ0=1;MQRankSum=-8.598;QD=24.44;ReadPosRankSum=3.124;VQSLOD=3.4594;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:7,1:18:15.72:16,0,34	0/0:1,0:4:3.74:0,4,8	0/0:15,0:11:10.63:0,11,205	0/0:6,0:6:12.01:0,12,190	0/0:3,0:20:26.03:0,26,107	1/1:3,18:22:60.07:678,60,0	1/1:3,11:14:33.06:386,33,0	0/0:16,0:27:23:0,23,106	1/1:7,6:13:23.96:269,24,0	1/1:9,17:26:60.03:681,60,0	1/1:6,8:16:29.45:307,29,0	1/1:2,9:11:21.03:245,21,0	0/0:8,0:9:27.05:0,27,421	1/1:2,6:8:18.03:210,18,0	1/1:2,19:21:54.12:631,54,0	1/1:6,8:14:26.99:315,27,0	1/1:4,6:10:18.02:210,18,0	1/1:3,4:7:14.99:174,15,0	1/1:6,14:21:44.98:509,45,0	1/1:3,7:12:29.91:316,30,0	1/1:1,6:8:11.91:123,12,0	0/0:5,0:5:12.04:0,12,225	0/0:12,0:16:48.10:0,48,752	0/0:6,0:6:18.06:0,18,325	1/1:0,12:12:36.11:421,36,0	1/1:3,29:33:85.70:997,86,0	1/1:8,19:28:56.87:681,57,0	1/1:0,4:4:12.04:140,12,0
chr10	66850073	.	GA	G	529.02	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.196;DP=583;FS=7.327;HRun=10;HaplotypeScore=58.9441;InbreedingCoeff=0.9251;MQ=66.29;MQ0=4;MQRankSum=-0.046;QD=18.89;ReadPosRankSum=1.637;VQSLOD=4.4539;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,1:37:73.17:0,73,1008	0/0:8,0:8:21.06:0,21,232	0/0:27,0:14:35.91:0,36,342	0/0:20,0:9:14.48:0,14,120	1/1:2,26:28:71.97:624,72,0	0/0:23,0:23:63.17:0,63,694	0/0:11,0:11:24.06:0,24,265	0/0:28,0:27:63.17:0,63,697	0/0:17,1:18:51.14:0,51,564	0/0:29,0:29:84.03:0,84,898	0/0:19,1:20:31.10:0,31,554	0/0:20,0:20:51.13:0,51,560	0/0:12,0:12:30.08:0,30,332	0/0:8,0:8:18.03:0,18,190	0/0:21,0:21:54.13:0,54,589	0/0:18,0:18:44.95:0,45,478	0/0:28,0:29:66:0,66,703	0/0:17,0:16:36.10:0,36,398	0/0:18,0:18:42.24:0,42,493	0/0:35,0:35:99:0,99,1080	0/0:10,0:10:24.03:0,24,253	0/0:14,1:15:13.05:0,13,364	0/0:23,0:23:61.05:0,61,665	0/0:21,0:21:51.14:0,51,564	0/0:22,2:24:20.08:0,20,672	0/0:26,0:27:60:0,60,645	0/0:28,0:27:74.40:0,74,793	0/0:8,0:6:15.04:0,15,166
chr10	66850794	.	CA	C	995.78	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.997;DP=628;FS=3.432;HRun=2;HaplotypeScore=60.4462;InbreedingCoeff=0.9904;MQ=83.06;MQ0=0;MQRankSum=-3.066;QD=30.18;ReadPosRankSum=1.029;VQSLOD=3.2157;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,120,1771	0/0:10,0:10:30.10:0,30,450	0/0:31,0:30:49.63:0,50,1045	0/0:14,0:13:27.63:0,28,390	1/1:0,33:33:84.27:1091,84,0	0/0:24,0:24:72.23:0,72,1043	0/0:20,0:20:57.19:0,57,851	0/0:34,0:34:96.30:0,96,1379	0/0:25,0:25:69.22:0,69,1011	0/0:22,0:22:60.20:0,60,884	0/0:25,0:25:72.22:0,72,1022	0/0:12,0:12:36.12:0,36,538	0/0:19,0:19:57.19:0,57,853	0/0:18,0:18:54.17:0,54,784	0/0:20,0:20:60.18:0,60,876	0/0:22,0:22:66.21:0,66,969	0/0:33,0:33:99:0,99,1422	0/0:20,0:20:57.19:0,57,854	0/0:25,0:25:72.21:0,72,1019	0/0:24,0:24:72.20:0,72,1017	0/0:25,0:25:72.23:0,72,1058	0/0:17,0:17:51.16:0,51,746	0/0:18,0:18:54.16:0,54,768	0/0:12,0:12:36.11:0,36,514	0/0:18,0:18:51.17:0,51,762	0/0:27,0:27:81.25:0,81,1157	0/0:31,0:31:90.30:0,90,1347	0/0:7,0:7:18.06:0,18,270
chr10	66851403	.	AT	A	716.63	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.859;DP=507;FS=2.453;HRun=8;HaplotypeScore=76.6003;InbreedingCoeff=0.7248;MQ=73.28;MQ0=1;MQRankSum=0.346;QD=23.89;ReadPosRankSum=0.407;VQSLOD=4.3224;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:36.11:0,36,433	0/0:15,0:15:42.12:0,42,496	0/0:19,0:18:19.08:0,19,302	0/0:13,0:11:12.23:0,12,98	1/1:1,29:30:84.13:811,84,0	0/0:32,0:32:90.25:0,90,1066	0/0:8,0:8:21.06:0,21,254	0/0:30,0:30:81.24:0,81,967	0/0:12,0:12:27.08:0,27,325	0/0:20,0:20:45.14:0,45,544	0/0:16,0:16:45.14:0,45,543	0/0:11,0:11:33.09:0,33,387	0/0:22,0:23:69.08:0,69,811	0/0:19,0:19:51.16:0,51,615	0/0:11,0:11:33.10:0,33,399	0/0:15,0:15:39.12:0,39,470	0/0:20,0:20:54.12:0,54,635	0/0:21,0:21:54.17:0,54,651	0/0:23,0:23:57.17:0,57,688	0/0:21,0:21:60.18:0,60,724	0/0:1,0:1:3.01:0,3,36	0/0:9,0:9:27.07:0,27,315	0/0:24,0:24:66.20:0,66,796	0/0:4,0:4:9.03:0,9,109	0/0:29,0:29:84.24:0,84,1001	0/0:27,0:26:69.21:0,69,833	0/0:33,0:33:99:0,99,1174	0/0:8,0:8:6.49:0,6,73
chr10	66852083	.	AT	A	1157.68	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=8.498;DP=449;FS=3.585;HRun=9;HaplotypeScore=41.5208;InbreedingCoeff=0.8162;MQ=72.50;MQ0=2;MQRankSum=0.568;QD=16.31;ReadPosRankSum=-1.203;VQSLOD=3.0812;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,20:22:51.02:467,51,0	1/1:0,5:5:12.01:110,12,0	0/0:15,0:10:24.88:0,25,239	0/1:15,0:8:12.47:12,0,40	0/0:31,0:31:84.23:0,84,959	0/0:18,0:18:54.13:0,54,602	0/0:5,0:5:12.04:0,12,139	1/1:2,26:28:78.04:713,78,0	0/0:15,0:15:39.12:0,39,450	0/0:26,0:26:69.20:0,69,789	0/0:28,0:28:75.21:0,75,856	0/0:11,0:11:30.07:0,30,336	0/0:15,0:15:39.12:0,39,450	0/0:9,0:9:27.08:0,27,310	0/0:18,0:18:48.14:0,48,553	0/0:16,0:16:45.13:0,45,518	0/0:15,0:15:45.12:0,45,509	0/0:19,0:19:45.13:0,45,511	0/0:12,0:12:30.09:0,30,346	0/0:18,0:18:51.14:0,51,579	0/0:7,0:7:18.04:0,18,198	0/0:8,0:8:15.04:0,15,173	0/0:10,0:10:30.09:0,30,346	0/0:11,0:11:33.09:0,33,372	0/0:17,0:17:51.14:0,51,581	0/0:20,0:20:60.18:0,60,692	0/0:25,0:25:75.22:0,75,865	0/0:9,0:9:21.06:0,21,242
chr10	66852205	.	TA	T	9496.70	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=4.683;DP=498;FS=8.773;HRun=9;HaplotypeScore=54.6684;InbreedingCoeff=0.9612;MQ=74.64;MQ0=1;MQRankSum=-1.551;QD=22.99;ReadPosRankSum=1.620;VQSLOD=5.5901;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,23:25:66.03:604,66,0	1/1:2,11:13:30.02:275,30,0	0/0:15,0:14:22.40:0,22,225	0/0:6,0:5:8.76:0,9,81	1/1:0,27:27:68.99:631,69,0	1/1:1,15:16:42.02:384,42,0	1/1:1,10:11:18.01:165,18,0	1/1:3,30:33:93:837,93,0	1/1:3,18:21:48.02:438,48,0	1/1:4,20:24:60.03:549,60,0	1/1:0,18:18:48.02:439,48,0	1/1:2,21:23:57.02:522,57,0	0/0:18,0:18:54.15:0,54,612	1/1:1,13:14:33.02:302,33,0	1/1:0,17:17:39.02:357,39,0	1/1:1,18:19:48.03:439,48,0	1/1:1,15:16:45.02:412,45,0	1/1:2,8:10:21:192,21,0	1/1:3,10:13:29.99:269,30,0	1/1:1,36:37:98.99:898,99,0	1/1:3,9:12:27.01:247,27,0	0/0:18,0:18:48.14:0,48,554	0/0:22,0:22:57.16:0,57,650	0/0:6,0:6:18.05:0,18,208	1/1:3,16:19:48.02:438,48,0	1/1:1,14:15:42.02:384,42,0	1/1:1,27:28:72.04:659,72,0	1/1:0,2:2:6:55,6,0
chr10	66852483	.	AG	A	17094.18	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=15.573;DP=707;FS=11.139;HRun=4;HaplotypeScore=123.2919;InbreedingCoeff=0.9992;MQ=73.35;MQ0=0;MQRankSum=-4.201;QD=32.68;ReadPosRankSum=2.484;VQSLOD=3.3557;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,22:23:63.19:756,63,0	1/1:0,10:10:30.09:360,30,0	0/0:19,0:20:56.68:0,57,681	0/0:23,1:21:56.73:0,57,726	0/0:35,0:34:99:0,99,1385	1/1:2,30:32:81.25:971,81,0	1/1:0,26:26:66.20:791,66,0	1/1:5,34:39:78.40:1154,78,0	1/1:0,25:25:69.21:827,69,0	1/1:1,31:32:93.27:1102,93,0	1/1:2,28:30:81.21:955,81,0	1/1:1,23:24:69.21:828,69,0	0/0:36,0:36:99:0,102,1384	1/1:3,15:18:42.13:504,42,0	1/1:1,29:30:84.26:1008,84,0	1/1:0,25:25:72.22:864,72,0	1/1:2,16:18:45.14:539,45,0	1/1:1,23:24:66.20:790,66,0	1/1:2,23:25:69.21:828,69,0	1/1:1,24:25:72.17:844,72,0	1/1:1,21:22:60.18:711,60,0	0/0:22,0:22:63.20:0,63,866	0/0:21,0:21:63.21:0,63,880	0/0:26,0:26:78.19:0,78,1017	1/1:1,28:29:78.24:936,78,0	1/1:0,21:21:63.18:744,63,0	1/1:0,38:38:99:1330,111,0	1/1:0,7:7:21.06:252,21,0
chr10	66852556	.	AAC	A	1217.77	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.648;DP=694;FS=3.164;HRun=0;HaplotypeScore=108.2692;InbreedingCoeff=0.9987;MQ=82.96;MQ0=0;MQRankSum=1.047;QD=35.82;ReadPosRankSum=-6.096;VQSLOD=3.2149;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:90.31:0,90,1707	0/0:9,0:9:27.09:0,27,512	0/0:21,0:21:41.58:0,42,1049	0/0:21,0:21:54.38:0,54,978	0/0:35,0:35:99:0,105,2012	0/0:29,0:29:81.28:0,81,1540	0/0:30,0:30:81.28:0,81,1564	1/1:0,34:34:96.20:1313,96,0	0/0:19,0:19:57.18:0,57,1068	0/0:24,0:24:72.25:0,72,1380	0/0:25,0:25:72.23:0,72,1344	0/0:23,0:23:69.24:0,69,1322	0/0:29,0:29:84.29:0,84,1602	0/0:24,0:24:69.18:0,69,1261	0/0:31,0:31:93.32:0,93,1796	0/0:22,0:22:63.20:0,63,1184	0/0:21,0:21:63.22:0,63,1208	0/0:18,0:18:51.17:0,51,985	0/0:29,0:29:84.28:0,84,1591	0/0:35,0:35:99:0,105,2015	0/0:17,0:17:51.17:0,51,984	0/0:18,0:18:54.17:0,54,1007	0/0:18,0:18:51.17:0,51,984	0/0:33,0:33:99:0,99,1851	0/0:18,0:18:51.17:0,51,973	0/0:37,0:37:99:0,108,2043	0/0:32,0:32:93.30:0,93,1740	0/0:11,0:11:33.08:0,33,599
chr10	66853367	.	T	TTATATATATA	10452.37	PASS	AB=0.803;AC=44;AF=0.786;AN=56;BaseQRankSum=-1.200;DP=306;FS=0.000;HRun=0;HaplotypeScore=89.1782;InbreedingCoeff=0.5344;MQ=80.48;MQ0=2;MQRankSum=-5.409;QD=41.98;ReadPosRankSum=-0.961;VQSLOD=3.9903;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:19:8.48:115,8,0	1/1:0,0:3:5.36:22,5,0	0/1:10,0:10:25.22:25,0,145	0/0:16,0:15:14.45:0,14,211	1/1:8,2:12:6.02:288,6,0	1/1:5,8:14:18.06:832,18,0	1/1:4,1:6:9.03:335,9,0	0/1:13,0:37:5.98:576,0,6	1/1:3,3:7:6.02:306,6,0	1/1:3,6:9:24.08:932,24,0	1/1:3,4:8:3.01:153,3,0	1/1:3,3:8:12.04:524,12,0	0/0:15,0:15:30.10:0,30,933	1/1:0,4:5:6.02:244,6,0	1/1:1,5:8:15.05:743,15,0	1/1:3,5:8:0.06:594,0,0	1/1:5,3:13:18.06:755,18,0	1/1:6,0:11:3.01:92,3,0	1/1:7,1:13:30.09:934,30,0	1/1:8,0:8:3.01:70,3,0	1/1:3,0:3:3.01:139,3,0	0/0:5,0:5:12.04:0,12,373	0/0:13,0:13:21.05:0,21,539	0/0:8,0:8:18.06:0,18,557	1/1:6,8:14:21.07:1070,21,0	1/1:9,4:13:15.04:563,15,0	1/1:4,7:11:12.04:599,12,0	1/1:1,4:6:12.04:540,12,0
chr10	66854028	.	CA	C	3523.62	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-9.865;DP=641;FS=1.987;HRun=1;HaplotypeScore=130.4080;InbreedingCoeff=0.9970;MQ=75.41;MQ0=0;MQRankSum=-1.625;QD=40.50;ReadPosRankSum=1.123;VQSLOD=3.2875;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,51:51:99:2055,147,0	1/1:0,12:12:36.12:503,36,0	0/0:20,0:20:60.20:0,60,930	0/0:13,0:13:36.01:0,36,486	0/0:28,0:28:81.28:0,81,1294	0/0:16,0:16:48.16:0,48,767	0/0:25,0:25:75.22:0,75,1144	1/1:1,23:24:69.23:965,69,0	0/0:25,0:25:75.26:0,75,1197	0/0:29,0:29:87.29:0,87,1359	0/0:22,0:22:66.22:0,66,1048	0/0:21,0:21:63.17:0,63,937	0/0:25,0:25:75.26:0,75,1192	0/0:25,0:25:75.24:0,75,1161	0/0:20,0:20:57.18:0,57,887	0/0:21,0:21:60.17:0,60,911	0/0:31,0:31:93.32:0,93,1484	0/0:25,0:25:69.24:0,69,1101	0/0:17,0:17:49.97:0,50,741	0/0:14,0:14:42.14:0,42,668	0/0:23,0:23:69.21:0,69,1069	0/0:28,0:28:84.29:0,84,1329	0/0:25,0:25:75.24:0,75,1175	0/0:20,0:20:60.20:0,60,947	0/0:18,0:18:54.17:0,54,839	0/0:23,0:23:69.19:0,69,1034	0/0:34,0:33:99:0,99,1549	0/0:6,0:6:18.06:0,18,287
chr10	66854133	.	T	TA	12468.07	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-13.377;DP=601;FS=5.335;HRun=8;HaplotypeScore=53.0519;InbreedingCoeff=0.9959;MQ=64.78;MQ0=0;MQRankSum=-1.928;QD=29.27;ReadPosRankSum=2.125;VQSLOD=5.2099;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,126,1142	0/0:19,0:19:51.02:0,51,467	0/0:14,0:14:36.02:0,36,329	0/0:5,0:5:14.98:0,15,131	1/1:2,28:30:85.44:949,85,0	1/1:2,18:20:51.15:588,51,0	1/1:2,19:21:57.17:657,57,0	0/0:35,0:35:92.98:0,93,839	1/1:4,15:19:42.12:484,42,0	1/1:4,22:26:71.58:802,72,0	1/1:1,14:15:36.11:414,36,0	1/1:3,28:31:84.25:969,84,0	0/0:15,0:16:44.05:0,44,386	1/1:2,21:23:63.19:727,63,0	1/1:0,22:21:63.19:727,63,0	1/1:4,24:28:69.15:780,69,0	1/1:1,24:25:69.20:796,69,0	1/1:3,17:21:39.12:450,39,0	1/1:6,23:29:69.19:782,69,0	1/1:1,26:27:75.14:835,75,0	1/1:2,11:13:33.09:374,33,0	0/0:15,0:15:42.02:0,42,384	0/0:13,0:13:39.02:0,39,357	0/0:10,0:10:26.96:0,27,239	1/1:6,16:22:42.12:484,42,0	1/1:0,24:24:72.20:819,72,0	1/1:5,18:23:54.16:621,54,0	1/1:1,6:7:18.05:208,18,0
chr10	66854547	.	T	TTGTGTG	12911.51	PASS	AB=1.000;AC=39;AF=0.696;AN=56;BaseQRankSum=-8.153;DP=671;FS=3.740;HRun=0;HaplotypeScore=126.6164;InbreedingCoeff=0.8408;MQ=56.58;MQ0=13;MQRankSum=-7.650;QD=26.68;ReadPosRankSum=-0.179;VQSLOD=4.6690;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:31:49.89:0,50,628	0/0:3,0:7:14.96:0,15,182	0/0:41,0:21:8.10:0,8,76	0/0:30,0:16:11.06:0,11,126	1/1:10,13:25:18.06:345,18,0	1/1:3,17:19:12.02:334,12,0	1/1:8,10:19:10.58:236,11,0	0/1:12,0:24:4.21:4,0,191	1/1:4,16:21:24.08:727,24,0	1/1:9,10:22:32.20:791,32,0	1/1:6,6:13:12.04:327,12,0	1/1:3,21:27:30.10:925,30,0	0/0:20,0:19:42.14:0,42,843	1/1:12,20:36:48.63:1450,49,0	1/1:11,21:31:36.12:1180,36,0	1/1:9,24:37:38.26:1153,38,0	1/1:10,17:30:21.07:547,21,0	1/1:13,18:34:22.32:574,22,0	1/1:20,0:21:19.82:294,20,0	1/1:3,10:16:20.99:607,21,0	1/1:13,14:28:6.02:137,6,0	0/0:11,0:11:1.04:0,1,300	0/0:13,0:14:30.87:0,31,530	0/0:31,0:31:35.40:0,35,998	1/1:4,14:20:27.09:885,27,0	1/1:3,17:23:34.37:1082,34,0	1/1:8,15:24:27.09:881,27,0	1/1:3,6:10:15.05:432,15,0
chr10	66855430	.	A	ATT	6043.24	PASS	AB=0.575;AC=44;AF=0.786;AN=56;BaseQRankSum=-0.618;DP=382;FS=4.356;HRun=13;HaplotypeScore=61.6866;InbreedingCoeff=0.5709;MQ=65.21;MQ0=10;MQRankSum=0.808;QD=18.42;ReadPosRankSum=0.302;VQSLOD=4.0039;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:7,0:25:11.50:86,0,11	1/1:1,1:7:15.49:84,15,0	1/1:16,0:7:8.35:39,8,0	0/0:21,0:12:7.18:0,7,61	1/1:6,14:21:36.02:430,36,0	1/1:2,14:17:47.64:601,48,0	1/1:3,4:6:15.05:203,15,0	1/1:13,1:31:0.51:176,1,0	1/1:1,5:9:20.47:230,20,0	1/1:6,4:12:19.91:209,20,0	1/1:5,6:14:21.80:204,22,0	1/1:3,6:9:20.54:238,21,0	0/0:13,0:13:23.91:0,24,201	1/1:3,5:8:6.02:77,6,0	1/1:1,9:10:21.07:284,21,0	1/1:0,7:8:17.55:212,18,0	1/1:6,18:23:45.15:611,45,0	1/1:10,12:23:47.54:554,48,0	1/1:8,8:17:39.46:446,39,0	1/1:6,12:18:33.11:438,33,0	1/1:3,1:2:3.01:41,3,0	0/0:1,0:1:3:0,3,26	0/0:8,0:8:8.85:0,9,72	0/0:4,0:6:2.29:0,2,41	1/1:9,2:14:23.44:221,23,0	1/1:5,7:12:26.55:316,27,0	1/1:4,4:8:8.65:122,9,0	0/1:2,6:8:5.37:221,0,5
chr10	66856631	.	CT	C	2883.98	PASS	AB=0.787;AC=35;AF=0.625;AN=56;BaseQRankSum=-3.242;DP=565;FS=2.522;HRun=15;HaplotypeScore=69.6152;InbreedingCoeff=0.5803;MQ=71.96;MQ0=7;MQRankSum=3.007;QD=7.55;ReadPosRankSum=4.671;VQSLOD=3.0213;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,1:37:58.71:0,59,542	0/1:7,1:8:4.72:5,0,80	0/0:22,0:15:4.44:0,4,65	0/0:14,0:11:8.92:0,9,63	0/0:22,2:24:0.93:0,1,281	1/1:3,16:19:26.67:203,27,0	1/1:4,6:10:13.60:82,14,0	0/0:16,0:37:61.88:0,62,339	1/1:2,11:13:20.68:134,21,0	1/1:16,14:29:14.01:176,14,0	1/1:5,15:22:45.36:278,45,0	1/1:2,7:8:11.82:77,12,0	0/0:23,1:23:42.41:0,42,358	1/1:13,5:19:21.05:140,21,0	1/1:6,13:20:13.75:164,14,0	1/1:9,10:21:9.25:163,9,0	1/1:9,13:22:46.93:286,47,0	1/1:8,10:18:23.57:154,24,0	0/1:9,14:24:85.95:161,0,86	1/1:7,9:17:29.63:183,30,0	0/1:8,1:9:6.35:62,0,6	0/0:2,0:4:1.55:0,2,4	0/1:9,1:11:0.18:0,0,103	0/0:17,1:15:19.58:0,20,277	0/1:8,14:23:2.79:95,0,3	1/1:15,9:23:41.57:247,42,0	1/1:6,20:29:5.75:206,6,0	1/1:9,19:28:30.73:256,31,0
chr10	66857470	.	TCTCCTTTTTGTC	T	16912.59	PASS	AB=0.641;AC=37;AF=0.661;AN=56;BaseQRankSum=12.587;DP=634;FS=16.543;HRun=0;HaplotypeScore=201.0042;InbreedingCoeff=0.8670;MQ=65.26;MQ0=0;MQRankSum=-9.509;QD=40.66;ReadPosRankSum=6.105;VQSLOD=2.5759;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:77.48:0,77,3454	0/0:10,0:10:24.07:0,24,1072	0/0:32,0:32:45.03:0,45,990	0/0:27,0:25:35.03:0,35,829	1/1:4,20:24:27.02:681,27,0	1/1:4,17:21:33.11:1122,33,0	1/1:2,17:19:21.07:697,21,0	0/0:32,0:31:57.18:0,57,1857	1/1:3,21:24:21.07:695,21,0	1/1:5,15:20:42.11:1044,42,0	1/1:2,11:13:27.02:704,27,0	1/1:5,26:31:51.18:1742,51,0	0/0:28,0:28:75.26:0,75,3715	1/1:2,24:26:42.14:1480,42,0	1/1:2,33:35:33.11:1076,33,0	1/1:4,38:42:60.13:2106,60,0	1/1:8,12:20:3.12:329,3,0	1/1:6,0:7:9.03:175,9,0	1/1:9,10:19:29.85:768,30,0	1/1:3,10:13:23.91:536,24,0	0/1:11,14:25:19.37:372,0,19	0/0:19,0:19:48.16:0,48,2248	0/0:14,0:14:33.11:0,33,1585	0/0:25,0:25:63.19:0,63,2811	1/1:3,11:14:15.05:499,15,0	1/1:9,23:32:63.12:1648,63,0	1/1:4,17:20:30.10:1057,30,0	1/1:5,5:10:5.79:183,6,0
chr10	66860745	.	GA	G	8387.92	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=9.700;DP=554;FS=1.203;HRun=10;HaplotypeScore=57.3739;InbreedingCoeff=0.9787;MQ=69.88;MQ0=0;MQRankSum=1.483;QD=21.45;ReadPosRankSum=4.345;VQSLOD=5.5942;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:33:84.01:0,84,895	0/0:9,0:9:21.05:0,21,226	0/0:10,0:10:9.69:0,10,111	0/0:8,0:9:10.83:0,11,98	1/1:3,28:31:74.97:651,75,0	1/1:4,14:19:35.02:292,35,0	1/1:1,13:14:32.99:286,33,0	0/0:43,0:43:99:0,106,1133	1/1:0,16:16:41.99:365,42,0	1/1:4,17:21:50.99:443,51,0	1/1:2,19:21:50.97:442,51,0	1/1:3,18:21:47.99:417,48,0	0/0:21,0:22:57.11:0,57,617	1/1:1,8:9:20.99:182,21,0	1/1:3,15:18:44.99:391,45,0	1/1:0,18:18:53.99:469,54,0	1/1:2,16:19:50.02:423,50,0	1/1:3,8:11:14.95:130,15,0	1/1:5,21:26:62.98:547,63,0	1/1:1,27:28:80.98:703,81,0	1/1:2,13:15:38.88:334,39,0	0/0:6,0:6:15.04:0,15,166	0/0:17,0:17:51.13:0,51,557	0/0:14,0:14:42.11:0,42,464	1/1:2,23:25:62.99:547,63,0	1/1:4,27:31:80.96:699,81,0	1/1:3,38:41:99:885,102,0	1/1:0,7:7:21:182,21,0
chr10	66862091	.	G	GA	2010.89	PASS	AB=0.710;AC=22;AF=0.393;AN=56;BaseQRankSum=-5.875;DP=616;FS=9.159;HRun=16;HaplotypeScore=85.3834;InbreedingCoeff=-0.1543;MQ=68.85;MQ0=1;MQRankSum=0.780;QD=4.88;ReadPosRankSum=-3.101;VQSLOD=0.6846;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:44:37.91:0,38,107	0/0:3,0:9:8.07:0,8,23	0/1:31,0:17:19.19:19,0,32	0/0:29,0:18:7.71:0,8,42	0/0:5,0:23:19.78:0,20,56	0/1:4,10:14:12.54:99,0,13	0/1:4,10:15:2.49:100,0,2	0/0:10,0:18:12.58:0,13,35	0/1:11,9:20:16.75:157,0,17	0/1:13,8:23:13.31:116,0,13	0/1:9,12:21:16.68:118,0,17	1/1:7,17:24:6.32:132,6,0	0/0:24,0:26:24.85:0,25,138	0/1:7,5:12:18.55:57,0,19	1/1:13,14:27:3.67:201,4,0	0/1:12,13:26:25.40:179,0,25	0/1:12,14:26:41.37:174,0,41	0/1:5,3:8:7.93:29,0,8	0/1:9,3:13:5.63:69,0,6	0/1:16,2:27:12.31:87,0,12	0/1:8,6:14:4.79:60,0,5	0/1:16,1:21:1.71:2,0,76	0/0:11,0:17:12.72:0,13,120	0/0:21,0:27:16.47:0,16,178	0/1:8,22:32:24.03:208,0,24	1/1:15,13:31:18.03:234,18,0	0/1:11,6:25:16.47:134,0,16	0/0:11,0:11:2.44:0,2,16
chr10	66862729	.	C	CATAG	5410.98	PASS	AB=0.802;AC=28;AF=0.538;AN=52;BaseQRankSum=-4.062;DP=690;FS=1.738;HRun=0;HaplotypeScore=105.2232;InbreedingCoeff=0.6187;MQ=68.58;MQ0=3;MQRankSum=0.812;QD=13.49;ReadPosRankSum=-1.252;VQSLOD=4.4902;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:20.95:0,21,170	0/0:5,0:5:5.99:0,6,48	./.	./.	0/0:25,0:21:17.86:0,18,135	1/1:25,5:30:54.05:833,54,0	1/1:25,0:25:20.88:162,21,0	0/0:40,0:34:5.99:0,6,48	0/1:15,16:31:40.09:64,0,40	0/0:36,0:36:23.87:0,24,494	0/0:17,0:17:33.02:0,33,388	1/1:16,20:37:9.03:210,9,0	0/0:19,0:19:33.03:0,33,393	1/1:11,15:26:6.02:140,6,0	0/1:9,2:28:0:0,0,0	1/1:28,2:30:2.21:862,2,0	1/1:14,0:14:21:343,21,0	0/1:20,1:21:52.84:332,0,53	1/1:16,0:16:15.03:188,15,0	1/1:4,13:17:11.63:220,12,0	1/1:17,14:31:3.01:70,3,0	0/0:16,0:16:20.90:0,21,202	0/0:22,0:22:33.03:0,33,375	0/0:20,0:20:15.01:0,15,163	0/1:24,0:24:38.54:528,0,39	1/1:31,1:32:51.06:685,51,0	1/1:28,0:28:51:605,51,0	1/1:11,0:11:20.95:169,21,0
chr10	66862769	.	G	GATACATAC	833.13	PASS	AB=1.000;AC=5;AF=0.096;AN=52;BaseQRankSum=-0.166;DP=660;FS=0.000;HRun=0;HaplotypeScore=183.1646;InbreedingCoeff=0.6889;MQ=56.79;MQ0=10;MQRankSum=-5.656;QD=9.58;ReadPosRankSum=-5.977;VQSLOD=0.5236;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:13,14:31:0.47:0,0,1	1/1:8,0:8:5.44:57,5,0	./.	./.	1/1:21,0:17:21.32:258,21,0	0/0:29,0:29:71.09:0,71,804	0/0:24,0:23:56.65:0,57,737	0/1:58,0:50:99:636,0,223	0/0:26,0:26:26.55:0,27,393	0/0:34,0:34:90.86:0,91,1702	0/0:21,0:21:54.18:0,54,1127	0/0:36,0:36:40.56:0,41,499	0/0:22,0:22:60.17:0,60,1148	0/0:26,0:26:28.94:0,29,392	0/0:33,0:33:42.13:0,42,672	0/0:32,0:32:86.71:0,87,1087	0/0:18,0:18:49.42:0,49,619	0/0:18,0:18:42.61:0,43,567	0/0:16,0:15:38.58:0,39,475	0/0:25,0:25:44.55:0,45,602	0/0:21,0:21:23.53:0,24,305	0/0:22,0:22:60.17:0,60,975	0/0:22,0:22:60.18:0,60,1121	0/0:13,0:13:30.10:0,30,575	0/0:28,0:28:73.32:0,73,1018	0/0:28,0:28:82.38:0,82,1157	0/0:29,0:29:83.37:0,83,1059	0/0:14,0:14:39.12:0,39,598
chr10	66862836	.	CA	C	9013.19	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=10.827;DP=620;FS=2.329;HRun=9;HaplotypeScore=67.2382;InbreedingCoeff=0.9950;MQ=73.16;MQ0=1;MQRankSum=3.420;QD=23.17;ReadPosRankSum=4.930;VQSLOD=5.5349;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,1:25:35.72:0,36,665	0/0:9,0:11:29.87:0,30,303	0/0:23,0:20:43.17:0,43,455	0/0:11,0:10:12.01:0,12,120	0/0:24,1:25:35.73:0,36,665	1/1:3,16:19:31.18:419,31,0	1/1:2,24:26:31.40:542,31,0	0/0:49,0:49:99:0,132,1494	1/1:1,15:16:42.02:384,42,0	1/1:2,22:24:66.03:604,66,0	1/1:1,14:15:42.02:384,42,0	1/1:2,21:23:51.03:467,51,0	0/0:21,1:22:29.68:0,30,577	1/1:2,22:24:60.03:549,60,0	1/1:5,16:21:42.02:384,42,0	1/1:1,23:24:63.03:577,63,0	1/1:4,25:29:75.04:686,75,0	1/1:1,18:19:51.03:467,51,0	1/1:1,13:14:39.01:353,39,0	1/1:4,30:34:89.94:807,90,0	1/1:1,14:15:42.02:384,42,0	0/0:27,0:27:69.21:0,69,796	0/0:19,0:19:51.15:0,51,588	0/0:19,0:19:48.61:0,49,555	1/1:3,30:33:84.04:769,84,0	1/1:4,15:19:42.01:384,42,0	1/1:2,21:23:60.03:549,60,0	1/1:0,11:11:33.02:302,33,0
chr10	66864908	.	TA	T	4411.52	PASS	AB=0.667;AC=39;AF=0.696;AN=56;BaseQRankSum=-2.054;DP=634;FS=50.251;HRun=13;HaplotypeScore=115.3298;InbreedingCoeff=0.4933;MQ=72.60;MQ0=1;MQRankSum=3.213;QD=8.62;ReadPosRankSum=7.189;VQSLOD=-0.4034;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:18,20:39:8.72:290,9,0	1/1:8,6:15:19.77:137,20,0	0/0:20,0:17:15.76:0,16,126	0/0:14,0:13:10.82:0,11,88	0/1:18,15:34:81.03:212,0,81	1/1:9,11:20:29.66:219,30,0	0/1:16,12:28:27.25:239,0,27	1/1:4,16:22:48.78:340,49,0	1/1:12,15:27:40.56:290,41,0	1/1:11,9:21:3.38:133,3,0	1/1:4,5:10:10.42:71,10,0	0/1:17,18:36:12.30:278,0,12	0/0:24,0:24:47.91:0,48,421	1/1:9,9:19:13.83:93,14,0	1/1:14,11:25:11.39:216,11,0	1/1:14,13:28:24.07:271,24,0	1/1:17,25:42:56.42:416,56,0	1/1:8,9:18:28.75:203,29,0	1/1:7,6:12:23.80:172,24,0	0/1:14,15:30:5.82:260,0,6	1/1:9,6:15:2.23:113,2,0	0/0:22,1:23:44.80:0,45,379	0/0:18,0:18:35.98:0,36,330	0/0:23,0:23:41.52:0,42,365	0/1:10,12:22:34.18:180,0,34	1/1:13,5:18:8.67:65,9,0	1/1:14,10:24:23.62:175,24,0	1/1:6,0:6:5.91:41,6,0
chr10	66868496	.	CAG	C	2391.40	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=10.046;DP=564;FS=3.190;HRun=0;HaplotypeScore=65.8404;InbreedingCoeff=0.9883;MQ=78.89;MQ0=0;MQRankSum=-1.362;QD=39.20;ReadPosRankSum=-2.573;VQSLOD=4.8808;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,26:26:66.22:1010,66,0	1/1:0,4:4:12.04:184,12,0	0/0:12,0:12:28.61:0,29,575	0/0:15,0:15:42.12:0,42,734	0/0:24,0:24:72.25:0,72,1390	0/0:22,0:22:63.22:0,63,1216	0/0:17,0:17:51.17:0,51,985	1/1:0,31:31:93.25:1337,93,0	0/0:15,0:15:45.15:0,45,869	0/0:26,0:26:78.26:0,78,1478	0/0:27,0:27:81.20:0,81,1428	0/0:21,0:21:63.20:0,63,1184	0/0:21,0:21:63.19:0,63,1151	0/0:24,0:24:69.21:0,69,1258	0/0:25,0:25:72.24:0,72,1359	0/0:22,0:22:63.21:0,63,1182	0/0:26,0:26:72.22:0,72,1313	0/0:26,0:26:78.27:0,78,1476	0/0:11,0:11:33.11:0,33,632	0/0:24,0:24:72.22:0,72,1324	0/0:12,0:12:36.05:0,36,529	0/0:12,0:12:33.10:0,33,604	0/0:13,0:13:36.11:0,36,662	0/0:14,0:14:39.13:0,39,742	0/0:22,0:22:63.20:0,63,1173	0/0:21,0:21:63.21:0,63,1186	0/0:38,0:37:99:0,111,2108	0/0:13,0:13:39.13:0,39,731
chr10	66869015	.	G	GT	9841.30	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=3.794;DP=516;FS=2.800;HRun=9;HaplotypeScore=67.0790;InbreedingCoeff=0.9710;MQ=53.96;MQ0=2;MQRankSum=3.704;QD=23.49;ReadPosRankSum=1.640;VQSLOD=5.8715;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,29:31:75.17:816,75,0	1/1:0,5:5:15.04:166,15,0	0/0:17,0:14:32.69:0,33,266	0/0:12,0:8:23.98:0,24,204	1/1:4,0:19:25.74:133,26,0	1/1:2,17:19:48.13:531,48,0	1/1:1,7:8:16.29:169,16,0	1/1:7,30:37:87.20:939,87,0	1/1:1,15:16:39.11:431,39,0	1/1:4,19:21:57.10:602,57,0	1/1:2,16:18:45.04:481,45,0	1/1:3,18:21:51.14:564,51,0	0/0:31,0:31:74.78:0,75,634	1/1:2,19:21:45.10:486,45,0	1/1:1,18:19:48.13:531,48,0	1/1:4,20:24:48.13:531,48,0	1/1:3,12:15:30.08:332,30,0	1/1:1,7:8:12.03:133,12,0	1/1:5,11:14:13.04:365,13,0	1/1:2,12:13:30.08:332,30,0	1/1:4,12:16:29.11:305,29,0	0/0:6,0:6:17.91:0,18,144	0/0:6,0:6:15:0,15,130	0/0:24,0:24:59.94:0,60,514	1/1:4,11:16:34.96:352,35,0	1/1:4,20:24:54.13:589,54,0	1/1:4,25:29:23.16:708,23,0	1/1:2,13:15:12.41:347,12,0
chr10	66870216	.	T	TA	398.89	PASS	AB=0.779;AC=6;AF=0.107;AN=56;BaseQRankSum=8.667;DP=705;FS=5.981;HRun=10;HaplotypeScore=93.2580;InbreedingCoeff=0.6304;MQ=68.02;MQ0=3;MQRankSum=-5.102;QD=4.43;ReadPosRankSum=-4.202;VQSLOD=0.4278;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:16,5:21:11.26:169,0,11	0/1:2,1:3:13.34:15,0,13	0/0:35,0:18:34.51:0,35,246	0/0:44,0:17:21.56:0,22,135	1/1:21,15:38:21.74:207,22,0	0/0:23,0:23:53.91:0,54,440	0/0:13,0:13:23.92:0,24,194	1/1:21,6:26:9.50:138,9,0	0/0:20,0:20:44.92:0,45,369	0/0:26,0:26:59.90:0,60,493	0/0:22,0:22:56.92:0,57,468	0/0:28,0:29:85.89:0,86,688	0/0:24,0:24:53.89:0,54,440	0/0:24,0:25:58.96:0,59,474	0/0:43,0:43:99:0,117,960	0/0:30,1:31:48.95:0,49,606	0/0:23,0:24:40.95:0,41,326	0/0:16,0:15:35.92:0,36,296	0/0:23,0:23:59.91:0,60,490	0/0:29,0:29:65.91:0,66,542	0/0:22,0:22:44.90:0,45,366	0/0:22,0:23:59.93:0,60,492	0/0:19,0:19:44.92:0,45,366	0/0:12,0:12:32.71:0,33,258	0/0:13,0:14:37.99:0,38,301	0/0:36,0:36:80.87:0,81,665	0/0:39,0:39:99:0,108,884	0/0:18,0:18:47.91:0,48,393
chr10	66870866	.	C	CAAA	7727.01	PASS	AB=1.000;AC=39;AF=0.696;AN=56;BaseQRankSum=-0.224;DP=455;FS=15.612;HRun=13;HaplotypeScore=101.9134;InbreedingCoeff=0.6808;MQ=40.79;MQ0=29;MQRankSum=-7.139;QD=22.40;ReadPosRankSum=-2.458;VQSLOD=1.5982;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:12:22.05:0,22,98	0/0:12,0:12:2.80:0,3,48	0/1:6,0:3:5.18:5,0,12	0/1:12,0:6:16.30:16,0,24	0/1:27,0:28:31.55:185,0,32	1/1:5,5:6:18.06:306,18,0	1/1:13,3:17:37.30:528,37,0	0/0:19,0:16:3.04:0,3,57	1/1:8,3:11:30.06:472,30,0	1/1:14,3:19:36.90:452,37,0	1/1:22,4:27:56.06:791,56,0	1/1:6,3:9:18.02:220,18,0	0/0:16,0:17:32.56:0,33,329	1/1:14,1:13:24.04:303,24,0	1/1:13,6:19:42.01:578,42,0	1/1:5,0:12:26.14:204,26,0	1/1:8,4:14:28.76:417,29,0	1/1:10,5:12:23.79:345,24,0	1/1:7,1:6:9:113,9,0	1/1:14,5:22:48.96:608,49,0	1/1:5,1:5:7.27:66,7,0	0/0:12,0:11:20.90:0,21,210	0/0:18,0:23:33.54:0,34,381	0/0:13,0:12:29.72:0,30,288	1/1:9,5:15:32.85:409,33,0	1/1:24,1:25:12.67:443,13,0	1/1:17,7:20:49.37:759,49,0	1/1:9,8:15:33.07:505,33,0
chr10	66870877	.	AAAG	A	1178.85	PASS	AB=1.000;AC=16;AF=0.286;AN=56;BaseQRankSum=-1.897;DP=483;FS=3.992;HRun=0;HaplotypeScore=120.5251;InbreedingCoeff=0.3155;MQ=48.61;MQ0=15;MQRankSum=-3.949;QD=5.26;ReadPosRankSum=-4.183;VQSLOD=0.7136;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:16,2:18:39.76:285,40,0	1/1:13,2:15:27.10:197,27,0	0/0:15,0:9:22.35:0,22,200	0/0:18,0:7:7.77:0,8,117	1/1:22,4:26:51.28:466,51,0	0/1:12,0:8:8.40:8,0,181	0/1:15,0:15:11.80:12,0,354	1/1:20,1:20:33.11:281,33,0	0/0:15,0:15:14.42:0,14,347	0/1:21,0:20:24.28:24,0,430	0/1:28,0:28:4.93:5,0,672	0/0:8,0:8:21.06:0,21,290	0/0:14,0:14:35.89:0,36,583	0/0:13,0:12:33.09:0,33,451	0/1:26,0:24:47.34:47,0,483	0/0:17,0:17:44.86:0,45,502	0/1:15,0:15:0.62:1,0,286	0/0:14,0:12:9.63:0,10,289	0/1:10,0:10:10.40:10,0,162	0/0:21,0:21:34.06:0,34,659	0/0:5,1:5:1.01:0,1,56	0/0:12,0:12:32.95:0,33,456	0/0:27,0:26:65.99:0,66,915	0/0:13,0:13:25.97:0,26,475	0/1:17,0:17:16.46:16,0,311	0/0:22,0:22:20.12:0,20,500	0/0:25,0:23:24.18:0,24,611	0/0:19,0:18:44.53:0,45,546
chr10	66870878	.	AAG	A	1941.70	PASS	AB=0.929;AC=19;AF=0.339;AN=56;BaseQRankSum=-3.698;DP=487;FS=2.473;HRun=0;HaplotypeScore=111.0976;InbreedingCoeff=0.0964;MQ=48.95;MQ0=13;MQRankSum=-3.548;QD=6.81;ReadPosRankSum=-4.638;VQSLOD=2.3746;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:11,7:18:44.26:445,44,0	1/1:4,11:15:29.77:302,30,0	0/0:15,0:9:15.63:0,16,162	0/0:18,0:7:10.35:0,10,100	1/1:19,8:27:66.87:578,67,0	0/1:8,2:8:36.06:36,0,126	0/1:13,2:15:39.31:39,0,240	1/1:8,13:20:46.69:434,47,0	0/1:14,1:15:4.09:4,0,242	0/1:21,1:21:59.47:59,0,356	0/1:26,3:29:25.37:25,0,500	0/0:9,0:9:23.75:0,24,215	0/0:14,0:14:35.76:0,36,459	0/0:13,1:13:32.81:0,33,326	0/1:24,2:24:57.90:58,0,343	0/0:17,0:17:44.85:0,45,394	0/1:14,1:15:32.66:33,0,183	0/0:14,0:12:3.04:0,3,197	0/1:10,0:10:35.41:35,0,136	0/0:22,0:22:42.63:0,43,488	0/0:7,0:6:2.85:0,3,62	0/0:12,0:12:32.97:0,33,386	0/0:28,0:27:65.01:0,65,704	0/0:13,0:13:28.88:0,29,372	0/1:17,0:17:15.89:16,0,221	0/1:19,2:21:24.11:24,0,385	0/1:22,2:23:32.44:32,0,394	0/0:19,0:18:44.24:0,44,386
chr10	66870915	.	AT	A	5422.99	PASS	AB=0.889;AC=37;AF=0.661;AN=56;BaseQRankSum=6.683;DP=472;FS=7.233;HRun=10;HaplotypeScore=80.2718;InbreedingCoeff=0.9033;MQ=59.44;MQ0=1;MQRankSum=0.069;QD=17.84;ReadPosRankSum=2.231;VQSLOD=5.5848;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:29.12:0,29,334	0/0:12,0:12:20.92:0,21,232	0/1:6,1:7:20.77:21,0,27	0/0:7,0:5:9:0,9,88	1/1:7,0:26:34.61:101,35,0	1/1:0,14:14:35.99:312,36,0	1/1:1,9:10:26.99:234,27,0	0/0:28,0:28:60.16:0,60,664	1/1:3,11:14:29.97:260,30,0	1/1:2,18:20:53.96:463,54,0	0/0:35,1:36:73.21:0,73,1036	1/1:2,9:11:17.98:156,18,0	0/0:15,0:15:42.09:0,42,442	1/1:2,13:15:26.99:234,27,0	1/1:2,18:20:50.97:443,51,0	1/1:2,13:15:29.98:260,30,0	1/1:4,11:15:29.93:254,30,0	1/1:4,9:13:17.98:156,18,0	1/1:6,9:15:26.99:234,27,0	1/1:6,12:18:38.96:338,39,0	1/1:1,5:6:11.98:103,12,0	0/0:12,0:12:36.10:0,36,398	0/0:28,0:28:75.14:0,75,802	0/0:11,0:11:26.97:0,27,256	1/1:1,16:17:47.98:417,48,0	1/1:2,15:17:44.99:390,45,0	1/1:3,27:30:51.59:601,52,0	1/1:1,19:20:50.98:443,51,0
chr10	66872044	.	C	CT	1183.10	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-4.720;DP=673;FS=3.328;HRun=3;HaplotypeScore=63.3038;InbreedingCoeff=0.9997;MQ=94.53;MQ0=0;MQRankSum=-2.412;QD=35.85;ReadPosRankSum=0.844;VQSLOD=4.3109;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:87.25:0,87,1030	0/0:17,0:17:51.14:0,51,600	0/0:34,0:34:93.01:0,93,1077	0/0:26,0:26:63.16:0,63,733	1/1:2,31:33:93.24:1278,93,0	0/0:34,0:34:96.27:0,96,1130	0/0:15,0:15:45.13:0,45,529	0/0:27,0:27:75.21:0,75,883	0/0:19,0:19:54.16:0,54,648	0/0:27,0:27:78.22:0,78,909	0/0:23,0:23:69.21:0,69,827	0/0:23,0:23:66.19:0,66,780	0/0:20,0:20:60.18:0,60,720	0/0:25,0:25:75.22:0,75,888	0/0:37,0:37:99:0,108,1285	0/0:27,0:27:72.22:0,72,864	0/0:29,0:29:87.24:0,87,1020	0/0:20,0:20:54.16:0,54,646	0/0:16,0:16:36.11:0,36,432	0/0:17,0:17:48.15:0,48,576	0/0:19,0:19:54.17:0,54,648	0/0:25,0:25:75.21:0,75,886	0/0:22,0:22:66.20:0,66,791	0/0:16,0:16:45.14:0,45,540	0/0:15,0:15:42.13:0,42,504	0/0:24,0:24:69.20:0,69,817	0/0:40,0:40:99:0,114,1367	0/0:12,0:12:36.11:0,36,432
chr10	66874122	.	A	AT	7685.86	PASS	AB=0.569;AC=34;AF=0.607;AN=56;BaseQRankSum=-12.278;DP=592;FS=6.068;HRun=10;HaplotypeScore=60.4784;InbreedingCoeff=0.8312;MQ=74.38;MQ0=0;MQRankSum=-1.933;QD=20.44;ReadPosRankSum=0.938;VQSLOD=5.8099;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:36:87.92:0,88,695	0/0:9,0:9:20.78:0,21,160	0/0:14,0:16:22.06:0,22,189	0/0:11,0:10:21.59:0,22,145	0/0:27,0:27:68.66:0,69,559	0/1:5,15:20:4.17:371,0,4	1/1:4,15:20:32.24:378,32,0	0/0:31,1:32:39.89:0,40,535	0/1:4,12:17:6.85:333,0,7	1/1:2,17:19:29.49:519,29,0	1/1:3,17:20:23.40:430,23,0	1/1:5,12:19:9.16:279,9,0	0/0:19,1:20:21.37:0,21,367	1/1:7,14:21:2.45:215,2,0	1/1:6,26:32:35.51:583,36,0	1/1:5,18:23:45.11:479,45,0	1/1:2,20:22:51.13:544,51,0	1/1:1,16:17:20.47:423,20,0	1/1:4,13:17:30.06:311,30,0	1/1:2,20:22:26.40:462,26,0	1/1:4,21:25:57.12:599,57,0	0/0:24,0:24:65.82:0,66,533	0/0:20,0:21:52.39:0,52,410	0/0:18,1:19:12.93:0,13,310	1/1:6,21:27:8.02:495,8,0	1/1:5,18:24:53.89:529,54,0	1/1:2,21:23:44.70:479,45,0	1/1:0,8:8:24.06:256,24,0
chr10	66875239	.	G	GAAAA	187.47	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=1.075;DP=337;FS=9.925;HRun=0;HaplotypeScore=88.0224;InbreedingCoeff=0.6620;MQ=48.36;MQ0=16;MQRankSum=-2.140;QD=4.26;ReadPosRankSum=0.307;VQSLOD=1.0656;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:3,2:13:5.85:80,6,0	1/1:0,0:5:5.96:44,6,0	0/0:5,0:3:2.74:0,3,12	0/0:7,0:4:6:0,6,79	1/1:14,0:15:17.84:155,18,0	0/0:16,0:15:39.07:0,39,597	0/0:10,0:10:27.02:0,27,368	0/1:11,0:10:11.21:39,0,11	0/0:10,0:9:24.07:0,24,400	0/0:11,0:11:33.05:0,33,482	0/0:18,0:18:42.08:0,42,707	0/0:13,0:13:36.09:0,36,562	0/0:12,0:12:26.09:0,26,385	0/0:10,0:7:20.39:0,20,250	0/0:22,0:22:50.69:0,51,724	0/0:8,0:8:24.07:0,24,403	0/0:20,0:19:51.13:0,51,837	0/0:8,0:6:18.03:0,18,251	0/0:20,0:19:57.14:0,57,919	0/0:12,0:11:18.05:0,18,291	0/0:9,0:7:14.99:0,15,156	0/0:8,0:7:18.05:0,18,291	0/0:18,0:17:27.09:0,27,451	0/0:11,0:11:18.05:0,18,292	0/0:9,0:7:18.06:0,18,353	0/0:16,0:16:42.11:0,42,681	0/0:16,0:15:38.84:0,39,589	0/0:3,0:2:6.02:0,6,121
chr10	66875262	.	C	CAA	10593.65	PASS	AB=1.000;AC=41;AF=0.732;AN=56;BaseQRankSum=-2.598;DP=540;FS=3.752;HRun=9;HaplotypeScore=88.7681;InbreedingCoeff=0.9318;MQ=63.07;MQ0=15;MQRankSum=-2.978;QD=25.16;ReadPosRankSum=-0.172;VQSLOD=4.6930;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:35.85:0,36,371	0/0:12,0:12:22.83:0,23,245	0/0:30,0:11:15.11:0,15,142	0/1:28,0:13:3.33:3,0,104	1/1:7,2:30:49.60:396,50,0	1/1:8,15:23:41.61:613,42,0	1/1:3,14:17:33.11:508,33,0	1/1:15,0:27:28.75:95,29,0	1/1:2,14:16:39.10:575,39,0	1/1:5,11:16:36.12:543,36,0	1/1:8,10:20:35.48:485,35,0	1/1:7,12:19:30.99:463,31,0	0/0:13,0:13:22.28:0,22,253	1/1:5,13:17:30.31:423,30,0	1/1:3,18:21:51.17:776,51,0	1/1:5,13:18:42.14:635,42,0	1/1:4,20:23:54.18:829,54,0	1/1:3,11:14:29.59:416,30,0	1/1:7,12:21:38.59:498,39,0	1/1:7,16:25:53.12:730,53,0	1/1:1,11:10:27.05:388,27,0	0/0:9,0:8:21.04:0,21,215	0/0:25,0:25:56.95:0,57,588	0/0:10,0:10:18.05:0,18,192	1/1:1,12:15:35.56:489,36,0	1/1:6,14:20:42.59:610,43,0	1/1:6,16:23:48.06:703,48,0	1/1:0,9:9:27.09:416,27,0
chr10	66876647	.	T	TGGA	1592.52	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-3.225;DP=768;FS=6.439;HRun=0;HaplotypeScore=105.0988;InbreedingCoeff=0.9988;MQ=84.03;MQ0=0;MQRankSum=-3.196;QD=56.88;ReadPosRankSum=-0.659;VQSLOD=4.9609;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:51.17:0,51,845	0/0:12,0:12:36.12:0,36,600	0/0:28,0:28:77.42:0,77,1230	0/0:21,0:21:45.92:0,46,717	1/1:3,25:28:75.22:1687,75,0	0/0:32,0:32:93.32:0,93,1544	0/0:14,0:14:42.14:0,42,700	0/0:32,0:32:90.28:0,90,1429	0/0:29,0:29:87.30:0,87,1444	0/0:41,0:41:99:0,117,1921	0/0:19,0:19:54.16:0,54,849	0/0:37,0:37:99:0,105,1740	0/0:46,0:46:99:0,123,2042	0/0:29,0:29:81.27:0,81,1327	0/0:39,0:39:99:0,111,1847	0/0:33,0:33:96.33:0,96,1599	0/0:19,0:19:54.18:0,54,895	0/0:9,0:9:27.09:0,27,450	0/0:26,0:26:72.23:0,72,1166	0/0:35,0:35:99:0,99,1649	0/0:32,0:32:96.31:0,96,1574	0/0:34,0:34:99:0,102,1696	0/0:25,0:25:75.24:0,75,1195	0/0:17,0:17:48.16:0,48,792	0/0:35,0:35:99:0,99,1621	0/0:28,0:28:81.28:0,81,1344	0/0:34,0:34:96.31:0,96,1572	0/0:14,0:14:42.13:0,42,675
chr10	66878376	.	T	TA	6211.02	PASS	AB=0.712;AC=42;AF=0.750;AN=56;BaseQRankSum=-6.551;DP=503;FS=11.349;HRun=12;HaplotypeScore=60.1875;InbreedingCoeff=0.5607;MQ=75.54;MQ0=0;MQRankSum=1.240;QD=15.04;ReadPosRankSum=1.492;VQSLOD=5.0062;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,1:20:22.63:112,23,0	1/1:1,0:6:14.20:72,14,0	0/0:16,0:13:2.89:0,3,65	0/0:16,0:15:0.20:0,0,32	1/1:3,16:20:39.20:385,39,0	1/1:2,23:26:51.04:487,51,0	1/1:4,12:17:29.15:304,29,0	1/1:6,19:28:60.11:520,60,0	0/1:6,18:24:4.71:273,0,5	1/1:7,17:25:31.98:447,32,0	1/1:2,10:13:26.78:228,27,0	1/1:5,18:23:20.16:358,20,0	0/0:30,0:30:71.98:0,72,523	1/1:1,13:14:24.04:234,24,0	1/1:5,11:16:7.91:216,8,0	1/1:5,12:17:7.34:214,7,0	1/1:0,12:12:33.05:321,33,0	1/1:1,14:15:29.98:279,30,0	1/1:3,15:18:20.50:336,20,0	0/1:6,12:19:1.81:159,0,2	0/1:7,4:11:31.80:46,0,32	0/0:15,0:15:34.32:0,34,221	0/1:11,1:13:1.26:1,0,151	0/0:11,0:11:26.65:0,27,194	1/1:2,15:17:27.93:264,28,0	1/1:8,18:26:1.21:327,1,0	1/1:6,16:23:44.91:422,45,0	1/1:2,8:10:21.03:204,21,0
chr10	66879873	.	TTA	T	2202.32	PASS	AB=1.000;AC=36;AF=0.643;AN=56;BaseQRankSum=13.045;DP=548;FS=12.640;HRun=0;HaplotypeScore=104.7599;InbreedingCoeff=0.3203;MQ=69.71;MQ0=0;MQRankSum=-1.424;QD=4.76;ReadPosRankSum=5.685;VQSLOD=1.5012;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:21:7.08:64,7,0	1/1:9,0:9:13.85:48,14,0	0/0:11,0:11:18.49:0,18,248	0/0:6,0:5:11.99:0,12,135	1/1:0,28:28:75.05:1016,75,0	0/1:19,0:19:11.26:29,0,11	0/1:10,0:10:17.01:17,0,19	0/1:36,0:36:89.10:156,0,89	1/1:21,0:21:0.06:35,0,0	1/1:25,0:25:15.23:105,15,0	1/1:29,0:29:18.93:80,19,0	0/1:20,0:20:5.81:39,0,6	0/0:24,0:24:72.22:0,72,1301	0/1:18,0:18:8.46:34,0,8	1/1:26,0:26:3.92:45,4,0	1/1:20,0:20:23.32:61,23,0	0/1:16,0:16:13.23:26,0,13	1/1:10,0:10:10.88:28,11,0	1/1:19,0:19:34.71:151,35,0	0/1:25,0:25:11.28:91,0,11	1/1:9,0:9:9.33:24,9,0	0/0:10,0:10:30.09:0,30,536	0/0:28,0:28:80.95:0,81,1284	0/0:6,0:6:17.97:0,18,237	0/1:23,0:23:1.85:44,0,2	1/1:30,0:30:28.27:177,28,0	1/1:33,0:32:14.23:84,14,0	1/1:16,0:16:0.27:32,0,0
chr10	66879874	.	TA	T	14215.21	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=9.103;DP=542;FS=7.931;HRun=2;HaplotypeScore=52.8050;InbreedingCoeff=0.9825;MQ=69.81;MQ0=0;MQRankSum=-1.002;QD=30.97;ReadPosRankSum=2.331;VQSLOD=3.8518;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,20:21:57.10:713,57,0	1/1:0,9:9:24.04:290,24,0	0/0:11,0:11:19.26:0,19,197	0/0:6,0:5:11.96:0,12,108	1/1:28,0:28:72.68:414,73,0	1/1:1,18:19:39.13:502,39,0	1/1:1,9:10:24.08:310,24,0	1/1:4,32:36:93.22:1115,93,0	1/1:1,20:21:45.15:579,45,0	1/1:0,24:24:72.09:895,72,0	1/1:0,28:28:78.25:1004,78,0	1/1:1,19:20:48.16:618,48,0	0/0:24,0:24:72.22:0,72,968	1/1:1,17:18:45.15:579,45,0	1/1:1,24:25:54.18:696,54,0	1/1:0,20:20:45.15:580,45,0	1/1:1,15:16:36.12:462,36,0	1/1:1,9:10:21.07:271,21,0	1/1:0,19:19:56.96:644,57,0	1/1:1,24:25:69.03:812,69,0	1/1:0,9:9:18.06:232,18,0	0/0:9,0:9:27.09:0,27,375	0/0:28,0:28:75.19:0,75,950	0/0:5,0:5:12.03:0,12,152	1/1:1,22:23:57.19:735,57,0	1/1:0,29:29:87.22:1066,87,0	1/1:1,32:33:90.29:1157,90,0	1/1:0,16:16:42.14:541,42,0
chr10	66881711	.	G	GGGAGAAA	41472.19	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-5.808;DP=585;FS=2.432;HRun=0;HaplotypeScore=114.2791;InbreedingCoeff=0.9794;MQ=60.94;MQ0=0;MQRankSum=-14.452;QD=86.22;ReadPosRankSum=-0.243;VQSLOD=5.5161;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,12:18:42:1305,42,0	1/1:3,4:7:12:376,12,0	0/0:10,0:10:27.09:0,27,676	0/0:9,0:9:21.04:0,21,416	1/1:10,22:33:81.12:2312,81,0	1/1:6,18:26:69.06:2254,69,0	1/1:3,6:9:24.08:867,24,0	1/1:21,18:42:99:3862,111,0	1/1:8,11:21:57.15:1910,57,0	1/1:7,13:24:60.19:1976,60,0	1/1:6,21:29:75.17:2414,75,0	1/1:7,11:19:54.19:1921,54,0	0/0:30,0:30:84.27:0,84,2102	1/1:11,21:36:87.13:2839,87,0	1/1:4,20:26:72.25:2620,72,0	1/1:10,14:28:63.17:2192,63,0	1/1:3,7:13:27.09:1048,27,0	1/1:5,5:13:26.96:763,27,0	1/1:8,8:19:54.18:1937,54,0	1/1:4,20:26:75.09:2192,75,0	1/1:2,3:7:9.03:356,9,0	0/0:16,0:16:45.15:0,45,1096	0/0:21,0:21:60.19:0,60,1486	0/0:18,0:18:54.15:0,54,1278	1/1:6,20:26:75.21:2778,75,0	1/1:10,14:24:69.24:2498,69,0	1/1:4,20:26:66.18:2341,66,0	1/1:2,5:9:21.07:709,21,0
chr10	66882005	.	C	CA	5534.73	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=6.156;DP=405;FS=0.000;HRun=0;HaplotypeScore=86.6610;InbreedingCoeff=0.9258;MQ=68.03;MQ0=0;MQRankSum=-1.521;QD=21.37;ReadPosRankSum=5.605;VQSLOD=6.6456;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:72.20:0,72,933	0/0:7,0:7:21.07:0,21,292	0/0:16,0:13:25.61:0,26,304	0/0:11,0:8:9.85:0,10,158	0/0:24,0:24:54.58:0,55,354	1/1:3,15:18:41.53:469,42,0	1/1:1,8:10:20.73:210,21,0	0/0:21,0:21:55.34:0,55,268	1/1:4,12:17:33.03:338,33,0	1/1:1,13:14:35.18:338,35,0	1/1:6,13:20:14.45:333,14,0	1/1:2,5:7:0.64:150,1,0	0/0:22,1:23:35.21:0,35,843	1/1:1,8:9:16.73:200,17,0	1/1:2,10:12:19.28:233,19,0	1/1:2,13:15:34.63:382,35,0	1/1:1,12:13:28.58:325,29,0	1/1:0,15:15:30.08:333,30,0	1/1:5,19:24:52.32:525,52,0	1/1:6,14:20:33.01:389,33,0	1/1:0,7:7:14.12:164,14,0	0/0:4,0:4:12.04:0,12,167	0/0:8,0:7:24.08:0,24,331	0/0:8,0:8:21.07:0,21,276	1/1:1,7:8:7.03:182,7,0	1/1:4,8:12:18.87:260,19,0	1/1:4,16:20:32.29:394,32,0	1/1:4,14:18:14.60:310,15,0
chr10	66882967	.	C	CTA	27519.25	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-14.658;DP=686;FS=1.186;HRun=0;HaplotypeScore=67.6897;InbreedingCoeff=0.9993;MQ=78.05;MQ0=1;MQRankSum=-5.450;QD=49.76;ReadPosRankSum=2.122;VQSLOD=5.5867;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,23:25:63.22:1194,63,0	1/1:1,11:12:30.10:580,30,0	0/0:18,0:18:51.16:0,51,734	0/0:20,0:20:46.97:0,47,679	1/1:0,34:34:96.33:1855,96,0	1/1:0,16:16:39.13:753,39,0	1/1:1,21:22:54.19:1042,54,0	1/1:4,46:51:99:2637,141,0	1/1:1,21:22:57.20:1101,57,0	1/1:0,28:28:84.27:1566,84,0	1/1:1,28:28:75.26:1449,75,0	1/1:2,33:35:90.31:1699,90,0	0/0:32,0:32:93.29:0,93,1378	1/1:0,25:25:57.20:1101,57,0	1/1:1,19:20:42.14:811,42,0	1/1:0,27:27:69.24:1333,69,0	1/1:0,20:20:54.19:1043,54,0	1/1:1,11:12:30.10:579,30,0	1/1:4,16:20:60.19:1121,60,0	1/1:0,32:32:87.30:1639,87,0	1/1:1,13:14:39.13:754,39,0	0/0:19,0:19:54.17:0,54,806	0/0:25,0:25:69.22:0,69,1030	0/0:19,0:19:54.13:0,54,777	1/1:1,35:36:84.29:1623,84,0	1/1:0,30:31:87.30:1669,87,0	1/1:2,32:33:78.27:1507,78,0	1/1:0,8:8:24.08:464,24,0
chr10	66883608	.	ATAGT	A	14067.49	PASS	AB=0.529;AC=37;AF=0.661;AN=56;BaseQRankSum=12.041;DP=647;FS=6.672;HRun=0;HaplotypeScore=139.2640;InbreedingCoeff=0.9182;MQ=67.84;MQ0=0;MQRankSum=-3.226;QD=30.78;ReadPosRankSum=1.201;VQSLOD=4.7216;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:72.25:0,72,1728	0/0:14,0:14:39.13:0,39,964	0/0:16,0:16:24.02:0,24,382	0/0:18,0:18:29.77:0,30,503	0/0:39,0:39:96.28:0,96,2158	1/1:6,24:30:48.16:800,48,0	1/1:2,12:14:27.09:449,27,0	1/1:11,10:21:30.08:438,30,0	1/1:5,17:22:45.15:753,45,0	1/1:7,15:22:45.15:722,45,0	1/1:5,18:24:22.05:741,22,0	1/1:8,18:26:45.15:737,45,0	0/0:30,0:30:69.24:0,69,1666	1/1:6,20:26:33.11:552,33,0	1/1:2,30:32:87.30:1439,87,0	1/1:9,30:39:66.23:1102,66,0	1/1:4,12:16:30.10:501,30,0	0/1:2,16:18:25.60:421,0,26	1/1:4,13:17:39.07:541,39,0	1/1:3,30:33:75.08:1159,75,0	1/1:4,15:19:33.11:536,33,0	0/0:11,0:11:27.08:0,27,618	0/0:16,0:16:36.11:0,36,762	0/0:15,0:15:39.13:0,39,920	1/1:5,13:18:24.08:401,24,0	1/1:7,33:40:96.31:1570,96,0	1/1:6,21:27:51.17:853,51,0	1/1:2,11:13:21.07:351,21,0
chr10	66883793	.	TA	T	5811.94	PASS	AB=0.667;AC=41;AF=0.759;AN=54;BaseQRankSum=2.072;DP=202;FS=1.023;HRun=1;HaplotypeScore=42.9699;InbreedingCoeff=0.6367;MQ=52.76;MQ0=3;MQRankSum=-4.164;QD=33.02;ReadPosRankSum=1.782;VQSLOD=4.4577;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,8:8:21.07:292,21,0	1/1:0,2:2:6.02:84,6,0	0/0:8,0:6:15.04:0,15,200	0/0:9,0:3:8.80:0,9,81	1/1:0,16:16:41.91:456,42,0	1/1:1,11:12:30.10:418,30,0	./.	1/1:0,10:10:30.03:378,30,0	1/1:0,4:4:6.02:83,6,0	1/1:0,14:14:42.13:568,42,0	1/1:0,3:3:5.98:62,6,0	1/1:1,8:8:15.01:187,15,0	0/0:2,0:1:3.01:0,3,46	1/1:0,8:8:21.07:292,21,0	1/1:0,11:11:18.06:251,18,0	1/1:0,12:12:33.06:437,33,0	1/1:0,7:7:18.06:251,18,0	0/1:3,3:6:23.04:107,0,23	1/1:0,12:12:36.11:487,36,0	1/1:0,9:9:27.09:376,27,0	1/1:0,1:1:3.01:42,3,0	0/0:1,0:1:3:0,3,25	0/0:2,0:2:6:0,6,68	0/0:2,0:2:6:0,6,69	1/1:0,14:14:33.11:459,33,0	1/1:1,4:4:12.04:167,12,0	1/1:0,10:10:27.09:376,27,0	1/1:2,1:3:3.01:42,3,0
chr10	66884883	.	A	AT	2748.69	PASS	AB=0.714;AC=18;AF=0.321;AN=56;BaseQRankSum=14.473;DP=500;FS=2.028;HRun=2;HaplotypeScore=127.2675;InbreedingCoeff=-0.3942;MQ=66.52;MQ0=0;MQRankSum=-3.328;QD=8.48;ReadPosRankSum=6.930;VQSLOD=1.1771;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:62.72:0,63,328	0/0:8,0:8:24.06:0,24,285	0/0:12,0:12:17.96:0,18,190	0/0:8,0:8:24.06:0,24,277	0/0:30,0:30:59.44:0,59,360	0/1:10,16:26:36.53:312,0,37	0/1:6,3:9:30.23:64,0,30	0/0:40,0:40:57.10:0,57,379	0/1:8,5:13:31.09:122,0,31	0/1:16,10:26:76.45:259,0,76	0/1:10,5:15:67.74:108,0,68	0/1:9,6:15:32.25:125,0,32	0/0:21,0:21:60.12:0,60,724	0/1:8,12:20:78.13:183,0,78	0/1:8,6:14:39.31:97,0,39	0/1:13,10:23:58.19:205,0,58	0/1:8,10:18:37.34:194,0,37	0/1:11,4:15:61.10:61,0,62	0/1:9,3:12:37.78:38,0,72	0/1:13,4:17:49.05:125,0,49	0/1:2,2:4:2.80:44,0,3	0/0:11,0:11:33.10:0,33,409	0/0:14,0:14:42.10:0,42,495	0/0:9,0:9:27.06:0,27,319	0/1:12,11:23:22.70:263,0,23	0/1:14,15:29:99:296,0,99	0/1:16,18:34:44.35:341,0,44	0/1:9,2:11:3.42:71,0,3
chr10	66884886	.	A	ATTT	8536.42	PASS	AB=0.721;AC=20;AF=0.357;AN=56;BaseQRankSum=1.944;DP=485;FS=12.066;HRun=2;HaplotypeScore=122.6785;InbreedingCoeff=-0.4077;MQ=65.25;MQ0=0;MQRankSum=-4.768;QD=24.46;ReadPosRankSum=6.799;VQSLOD=0.9033;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:23:67.46:0,67,513	0/0:8,0:8:24.08:0,24,420	0/0:10,0:10:24:0,24,288	0/0:9,0:9:23.66:0,24,304	0/0:30,0:30:60.24:0,60,602	0/1:10,16:26:13.26:961,0,13	0/1:5,3:8:55.10:146,0,55	0/1:41,0:41:44.08:44,0,541	0/1:8,4:13:44.50:355,0,45	0/1:14,10:24:91.45:618,0,91	0/1:10,5:15:97.92:279,0,98	0/1:8,6:14:39.71:382,0,40	0/0:22,0:22:66.19:0,66,1061	0/1:7,12:19:51.94:601,0,52	0/1:8,6:14:30.75:410,0,31	0/1:11,10:21:99:492,0,103	0/1:9,10:19:53.14:564,0,53	0/1:11,4:15:83.20:255,0,83	0/1:8,3:11:44.80:243,0,45	0/1:12,4:16:45.41:333,0,45	1/1:2,2:4:9.02:141,9,0	0/0:12,0:12:36.11:0,36,616	0/0:13,0:13:39.12:0,39,632	0/0:9,0:9:27.08:0,27,451	0/1:10,11:21:58.30:637,0,58	0/1:14,15:29:99:867,0,109	0/1:14,18:32:30.83:1115,0,31	0/1:5,2:7:52.84:92,0,53
chr10	66886289	.	G	GTTTT	11376.26	PASS	AB=0.558;AC=43;AF=0.768;AN=56;BaseQRankSum=2.599;DP=555;FS=18.226;HRun=9;HaplotypeScore=102.6992;InbreedingCoeff=0.8930;MQ=84.17;MQ0=1;MQRankSum=-3.218;QD=25.68;ReadPosRankSum=1.364;VQSLOD=1.5920;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,0:17:20.55:129,21,0	1/1:0,0:8:17.55:102,18,0	0/0:19,0:20:39.04:0,39,517	0/0:18,0:18:25.53:0,26,330	1/1:1,17:22:60.12:1075,60,0	1/1:3,0:27:36.07:430,36,0	1/1:1,0:10:24.08:300,24,0	0/1:6,0:29:28.69:32,0,29	1/1:4,0:20:42.13:544,42,0	1/1:8,1:21:43.65:559,44,0	1/1:4,1:20:39.32:448,39,0	1/1:3,0:18:33.10:410,33,0	0/0:22,0:22:54.14:0,54,790	1/1:3,0:17:45.10:533,45,0	1/1:4,1:21:45.14:598,45,0	1/1:3,2:29:72.14:947,72,0	1/1:1,0:16:36.03:427,36,0	1/1:4,0:18:42.13:517,42,0	1/1:1,1:14:36.12:564,36,0	1/1:1,1:24:72.12:898,72,0	1/1:4,2:28:45.14:632,45,0	0/0:7,0:7:21.07:0,21,306	0/0:25,0:25:57.08:0,57,813	0/0:19,0:20:51.07:0,51,685	1/1:4,2:18:30.10:433,30,0	1/1:2,0:19:51.11:692,51,0	1/1:6,1:34:69.14:919,69,0	1/1:1,0:12:15.05:187,15,0
chr10	66886390	.	CTCACT	C	1334.96	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.021;DP=631;FS=0.000;HRun=0;HaplotypeScore=114.2430;InbreedingCoeff=0.9979;MQ=79.79;MQ0=0;MQRankSum=-4.335;QD=47.68;ReadPosRankSum=-3.379;VQSLOD=2.6118;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:72.25:0,72,2162	0/0:8,0:8:24.08:0,24,761	0/0:26,0:26:75.05:0,75,1936	0/0:19,0:17:48.16:0,48,1236	0/0:30,0:30:90.23:0,90,2680	0/0:28,0:28:81.24:0,81,2365	0/0:16,0:16:45.13:0,45,1227	1/1:4,24:28:72.23:1430,72,0	0/0:21,0:21:63.19:0,63,1801	0/0:23,0:23:66.17:0,66,1901	0/0:27,0:27:75.24:0,75,2307	0/0:17,0:17:51.18:0,51,1590	0/0:27,0:27:81.28:0,81,2518	0/0:24,0:24:72.25:0,72,2156	0/0:32,0:32:90.29:0,90,2727	0/0:26,0:26:78.27:0,78,2360	0/0:18,0:18:54.16:0,54,1563	0/0:18,0:18:54.19:0,54,1654	0/0:16,0:16:45.15:0,45,1341	0/0:28,0:28:84.26:0,84,2458	0/0:16,0:16:48.16:0,48,1506	0/0:22,0:22:63.22:0,63,1859	0/0:22,0:22:66.21:0,66,2023	0/0:25,0:25:66.23:0,66,1989	0/0:18,0:18:51.17:0,51,1529	0/0:26,0:26:75.25:0,75,2239	0/0:28,0:28:75.24:0,75,2306	0/0:17,0:17:51.18:0,51,1569
chr10	66886987	.	A	AAC	908.43	PASS	AB=0.968;AC=5;AF=0.089;AN=56;BaseQRankSum=-4.702;DP=506;FS=9.607;HRun=0;HaplotypeScore=97.5764;InbreedingCoeff=0.2659;MQ=70.29;MQ0=1;MQRankSum=1.767;QD=10.32;ReadPosRankSum=-5.577;VQSLOD=0.8398;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:60.17:0,60,717	0/0:8,0:8:24.07:0,24,291	0/0:19,0:13:16.81:0,17,156	0/1:23,0:19:0.85:1,0,155	0/1:15,1:17:3.44:3,0,442	0/0:24,0:25:60.02:0,60,706	0/1:13,0:13:16.81:17,0,251	1/1:11,21:34:2.41:980,2,0	0/0:12,0:13:32.93:0,33,378	0/0:19,0:19:51.16:0,51,619	0/0:17,0:17:41.16:0,41,479	0/0:20,0:21:50.96:0,51,574	0/0:16,0:16:39.12:0,39,473	0/0:14,0:14:39.12:0,39,473	0/0:20,0:21:44.97:0,45,524	0/0:16,0:16:39.12:0,39,473	0/0:30,0:30:75.22:0,75,898	0/0:17,0:17:12.65:0,13,374	0/0:17,0:17:39.10:0,39,450	0/0:18,0:18:54.17:0,54,655	0/0:15,0:15:33.10:0,33,400	0/0:10,0:10:15.05:0,15,182	0/0:15,0:15:35.84:0,36,423	0/0:16,0:16:30.09:0,30,363	0/0:22,0:23:59.84:0,60,674	0/0:19,0:20:47.98:0,48,560	0/0:12,0:13:32.93:0,33,378	0/0:6,0:6:15.01:0,15,165
chr10	66890389	.	GGTTT	G	4602.91	PASS	AB=0.977;AC=35;AF=0.625;AN=56;BaseQRankSum=-1.329;DP=591;FS=30.844;HRun=0;HaplotypeScore=119.5548;InbreedingCoeff=0.2903;MQ=69.20;MQ0=9;MQRankSum=-2.113;QD=10.44;ReadPosRankSum=-3.094;VQSLOD=2.0852;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:30:91.70:217,0,92	0/1:7,1:8:48.13:58,0,48	0/0:32,0:10:9.69:0,10,183	0/0:40,0:25:14.42:0,14,436	0/1:25,0:25:98.30:98,0,238	1/1:21,0:20:12.39:286,12,0	0/1:18,1:19:20.94:257,0,21	0/1:34,0:33:99:250,0,206	0/1:14,0:14:7.17:120,0,7	1/1:19,0:19:29.60:196,30,0	0/1:22,1:23:3.89:183,0,4	0/1:17,0:17:4.79:83,0,5	0/0:21,0:21:56.12:0,56,909	1/1:14,0:14:11.47:57,11,0	1/1:25,0:25:18.74:389,19,0	1/1:15,0:15:1.79:122,2,0	1/1:30,0:29:34.26:383,34,0	1/1:8,1:8:5.38:61,5,0	0/1:21,0:21:2.69:261,0,3	1/1:26,1:27:32.31:471,32,0	1/1:9,0:9:1.06:108,1,0	0/0:12,0:12:19.72:0,20,356	0/0:20,0:20:54.08:0,54,928	0/0:24,0:24:51.36:0,51,863	1/1:23,1:24:24.91:216,25,0	1/1:24,0:24:27.90:330,28,0	1/1:26,0:25:20.95:373,21,0	1/1:7,0:7:15.95:82,16,0
chr10	66890391	.	TTTG	T	7992.77	PASS	AB=1.000;AC=41;AF=0.732;AN=56;BaseQRankSum=-4.082;DP=615;FS=4.513;HRun=0;HaplotypeScore=103.2146;InbreedingCoeff=0.6963;MQ=68.49;MQ0=10;MQRankSum=-2.407;QD=17.34;ReadPosRankSum=-1.379;VQSLOD=4.0002;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:31,2:33:31.21:354,31,0	0/1:8,0:8:9.54:96,0,10	0/0:35,0:9:11.56:0,12,177	0/0:43,0:27:32.89:0,33,408	0/1:24,0:24:99:146,0,101	1/1:15,7:21:54.04:571,54,0	1/1:18,2:20:26.48:374,26,0	0/1:35,0:34:95.51:269,0,96	1/1:14,0:14:21.99:310,22,0	1/1:19,1:20:54.66:447,55,0	1/1:23,0:23:50.63:411,51,0	1/1:16,2:18:10.55:203,11,0	0/0:21,0:21:45.45:0,45,700	1/1:13,1:14:14.96:144,15,0	1/1:21,4:25:61.49:642,61,0	1/1:15,2:17:41.10:315,41,0	1/1:30,2:31:69.39:620,69,0	1/1:11,0:10:5.99:59,6,0	1/1:20,1:21:35.88:419,36,0	1/1:21,7:28:74.01:796,74,0	1/1:11,0:11:17.98:149,18,0	0/0:12,0:12:14.45:0,14,266	0/0:19,0:19:54.10:0,54,751	0/0:24,0:24:36.41:0,36,655	1/1:19,5:24:26.89:289,27,0	1/1:22,3:25:58.34:568,58,0	1/1:27,2:28:59.54:627,60,0	1/1:6,1:7:17.97:183,18,0
chr10	66890392	.	TTG	T	10090.59	PASS	AB=0.960;AC=45;AF=0.804;AN=56;BaseQRankSum=-4.501;DP=621;FS=7.422;HRun=0;HaplotypeScore=87.5605;InbreedingCoeff=0.8091;MQ=69.08;MQ0=10;MQRankSum=-2.931;QD=20.72;ReadPosRankSum=-1.448;VQSLOD=4.5949;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:30,3:33:74.57:588,75,0	1/1:6,2:8:13.57:167,14,0	0/0:36,0:9:10.83:0,11,143	0/0:43,0:28:27.34:0,27,362	1/1:23,1:24:12.95:251,13,0	1/1:17,6:22:63.08:677,63,0	1/1:19,0:19:45.98:398,46,0	1/1:35,0:34:31.53:421,32,0	1/1:8,6:14:35.43:426,35,0	1/1:2,18:20:56.85:559,57,0	1/1:18,5:23:62.22:584,62,0	1/1:4,14:18:19.61:248,20,0	0/0:21,0:21:35.54:0,36,520	1/1:2,11:13:15.01:189,15,0	1/1:24,2:26:74.20:666,74,0	1/1:15,2:17:47.97:487,48,0	1/1:22,10:31:80.11:823,80,0	1/1:2,9:10:6.02:75,6,0	1/1:19,2:21:57.04:531,57,0	1/1:26,2:28:77.96:738,78,0	1/1:12,0:12:25.67:224,26,0	0/0:13,0:13:3.49:0,3,198	0/0:20,0:20:45.91:0,46,543	0/1:23,1:24:12.68:13,0,428	1/1:6,17:23:26.97:330,27,0	1/1:22,4:26:71.25:672,71,0	1/1:26,4:29:81.86:768,82,0	1/1:1,6:7:18.06:254,18,0
chr10	66890393	.	TG	T	9888.02	PASS	AB=0.944;AC=46;AF=0.821;AN=56;BaseQRankSum=-0.639;DP=622;FS=16.059;HRun=1;HaplotypeScore=79.5550;InbreedingCoeff=0.7063;MQ=69.40;MQ0=10;MQRankSum=-2.860;QD=19.78;ReadPosRankSum=-2.551;VQSLOD=3.3364;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:27,5:33:79.03:678,79,0	1/1:7,1:8:20.32:177,20,0	0/0:37,0:9:8.41:0,8,119	0/0:44,0:28:11.35:0,11,292	1/1:24,1:25:65:452,65,0	1/1:22,0:21:63.02:576,63,0	1/1:18,1:19:50.85:429,51,0	1/1:33,1:33:81.43:623,81,0	1/1:14,0:14:41.34:359,41,0	1/1:19,1:20:56.83:484,57,0	1/1:23,1:24:61.97:539,62,0	1/1:17,0:17:20.95:194,21,0	0/0:21,0:21:16.72:0,17,360	1/1:12,1:13:14.99:141,15,0	1/1:26,1:27:77.69:685,78,0	1/1:16,1:17:48.01:449,48,0	1/1:31,2:32:83.99:718,84,0	1/1:10,1:10:6:54,6,0	1/1:21,0:21:62.44:548,62,0	1/1:25,3:28:78.01:727,78,0	1/1:8,2:10:25.98:209,26,0	0/1:12,1:13:28.03:28,0,148	0/0:20,0:20:39.26:0,39,386	0/1:23,1:24:12.78:13,0,277	1/1:23,0:23:26.94:248,27,0	1/1:24,1:25:71.88:647,72,0	1/1:31,1:31:83.65:732,84,0	1/1:7,0:7:18.03:178,18,0
chr10	66891479	.	GAAAAGGA	G	3500.94	PASS	AB=1.000;AC=37;AF=0.685;AN=54;BaseQRankSum=-2.548;DP=358;FS=0.000;HRun=0;HaplotypeScore=62.1513;InbreedingCoeff=0.5221;MQ=50.14;MQ0=34;MQRankSum=-2.948;QD=14.12;ReadPosRankSum=-2.759;VQSLOD=1.2554;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:18:8.12:0,8,586	0/0:3,0:3:8.99:0,9,88	0/0:27,0:6:0.05:0,0,104	0/0:32,0:10:19.55:0,20,323	0/1:25,0:22:91.09:91,0,222	1/1:11,0:11:8.31:129,8,0	1/1:8,0:5:3.01:62,3,0	0/1:29,0:28:6.17:6,0,391	1/1:5,0:3:3.01:71,3,0	1/1:10,0:8:21.07:445,21,0	1/1:2,8:9:15.05:300,15,0	1/1:6,0:4:8.39:92,8,0	0/0:8,0:6:15.05:0,15,439	1/1:3,0:3:3.01:63,3,0	1/1:4,0:4:6.02:107,6,0	./.	1/1:29,0:26:24.54:365,25,0	1/1:14,0:8:5.91:81,6,0	1/1:5,0:5:12.51:241,13,0	1/1:6,8:12:13.39:226,13,0	1/1:8,0:6:2.04:6,2,0	0/0:4,0:3:9.03:0,9,280	0/0:13,0:12:20.37:0,20,371	0/1:14,0:13:4.59:5,0,348	1/1:21,0:21:23.80:343,24,0	1/1:10,0:10:21.33:417,21,0	1/1:17,0:16:27.55:379,28,0	1/1:5,0:4:3.01:71,3,0
chr10	66891483	.	AGG	A	1817.12	PASS	AB=0.940;AC=38;AF=0.704;AN=54;BaseQRankSum=3.107;DP=339;FS=1.237;HRun=2;HaplotypeScore=48.8543;InbreedingCoeff=0.3508;MQ=58.13;MQ0=30;MQRankSum=-3.739;QD=7.21;ReadPosRankSum=-1.582;VQSLOD=-0.2529;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:19,1:18:28.80:29,0,266	0/0:3,0:3:3.69:0,4,64	0/1:28,0:7:0.67:1,0,77	0/0:33,1:12:7.13:0,7,249	0/1:20,5:22:99:106,0,220	1/1:9,0:9:5.99:49,6,0	1/1:8,0:5:3:25,3,0	0/0:31,2:34:17.29:0,17,697	1/1:3,0:1:3.01:34,3,0	1/1:11,0:10:23.11:200,23,0	1/1:8,0:8:14.93:120,15,0	1/1:4,1:3:6.01:67,6,0	0/0:9,0:8:17.55:0,18,299	1/1:4,0:4:3:26,3,0	1/1:4,0:4:6.01:62,6,0	./.	1/1:15,6:18:24.04:248,24,0	1/1:9,0:5:3:25,3,0	1/1:7,0:7:20.88:166,21,0	1/1:11,0:9:12:109,12,0	0/1:6,0:4:0:0,0,0	0/0:4,0:3:9.03:0,9,153	0/1:10,2:11:16.75:17,0,170	0/1:12,0:12:32.65:33,0,219	1/1:20,2:22:21.02:201,21,0	1/1:7,0:7:20.73:146,21,0	1/1:12,5:16:27.06:299,27,0	1/1:3,0:2:2.99:23,3,0
chr10	66891484	.	GGA	G	2288.55	PASS	AB=1.000;AC=33;AF=0.635;AN=52;BaseQRankSum=1.424;DP=339;FS=0.000;HRun=0;HaplotypeScore=47.7221;InbreedingCoeff=0.6203;MQ=58.31;MQ0=30;MQRankSum=-1.691;QD=13.38;ReadPosRankSum=-2.861;VQSLOD=2.2923;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:18:16.97:0,17,212	0/0:3,0:3:6.38:0,6,38	0/0:29,0:8:7.37:0,7,119	0/0:34,0:12:1.23:0,1,287	0/1:24,0:21:41.61:42,0,107	1/1:0,8:8:6.02:84,6,0	1/1:3,5:5:3.01:42,3,0	0/0:36,0:35:17.49:0,17,343	1/1:3,0:1:3.01:46,3,0	1/1:1,10:10:27.06:375,27,0	1/1:8,0:8:15.05:202,15,0	1/1:3,2:3:5.98:63,6,0	0/0:10,0:9:23.44:0,23,390	1/1:1,3:4:3.01:43,3,0	1/1:0,4:4:6.02:74,6,0	./.	1/1:8,13:18:23.54:211,24,0	1/1:4,5:5:3.01:44,3,0	1/1:0,7:7:21.07:291,21,0	1/1:10,0:8:12.04:164,12,0	./.	0/0:4,0:3:9.03:0,9,182	0/0:12,0:11:15.29:0,15,244	0/0:12,0:12:2.92:0,3,285	1/1:2,20:22:20.60:210,21,0	1/1:6,1:7:21.07:300,21,0	1/1:5,12:16:26.53:231,27,0	1/1:3,0:2:3.01:46,3,0
chr10	66891485	.	GA	G	2199.91	PASS	AB=0.613;AC=39;AF=0.750;AN=52;BaseQRankSum=2.184;DP=335;FS=2.628;HRun=10;HaplotypeScore=45.2680;InbreedingCoeff=0.6053;MQ=58.65;MQ0=26;MQRankSum=0.051;QD=9.69;ReadPosRankSum=-0.888;VQSLOD=1.7455;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:7,12:18:29.56:198,0,30	1/1:1,2:3:6:52,6,0	0/0:28,1:8:8.78:0,9,86	0/0:34,0:12:10.82:0,11,183	1/1:10,14:21:30.52:295,31,0	1/1:8,0:8:5.99:48,6,0	1/1:6,1:5:2.99:24,3,0	1/1:9,27:35:66.07:670,66,0	1/1:3,0:1:2.98:22,3,0	1/1:11,0:10:26.81:195,27,0	1/1:8,0:8:14.87:112,15,0	1/1:5,0:3:2.99:23,3,0	0/0:9,0:9:20.93:0,21,223	1/1:4,0:4:2.99:23,3,0	1/1:4,0:4:5.93:41,6,0	./.	1/1:21,0:18:8.81:68,9,0	1/1:9,0:5:2.99:23,3,0	1/1:7,0:7:20.69:141,21,0	1/1:10,0:8:11.93:91,12,0	./.	0/0:4,0:3:9.02:0,9,100	0/0:12,0:11:14.97:0,15,142	0/0:12,0:12:18.01:0,18,174	1/1:22,0:22:11.63:94,12,0	1/1:1,6:7:20.75:145,21,0	1/1:17,0:16:11.84:83,12,0	1/1:0,2:2:2.98:22,3,0
chr10	66892199	.	G	GA	12929.67	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-10.455;DP=556;FS=6.898;HRun=8;HaplotypeScore=52.3566;InbreedingCoeff=0.9794;MQ=78.02;MQ0=0;MQRankSum=-4.097;QD=27.69;ReadPosRankSum=2.305;VQSLOD=5.4280;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,39:47:99:1177,102,0	1/1:0,10:10:27.08:312,27,0	0/0:20,0:19:44.77:0,45,384	0/0:8,0:8:10.84:0,11,89	1/1:2,17:19:45.13:519,45,0	1/1:4,13:17:30.09:346,30,0	1/1:3,18:21:48.14:554,48,0	1/1:4,23:27:63.19:727,63,0	1/1:1,14:15:39.12:450,39,0	1/1:3,18:21:54.12:601,54,0	1/1:2,18:20:54.16:623,54,0	1/1:1,17:18:48.14:554,48,0	0/0:19,0:19:48.01:0,48,439	1/1:1,15:16:45.13:519,45,0	1/1:3,20:23:54.16:623,54,0	1/1:4,14:18:42.12:485,42,0	1/1:5,23:28:63.19:727,63,0	1/1:0,13:14:38.95:430,39,0	1/1:2,9:11:27.08:311,27,0	1/1:7,19:26:54.03:577,54,0	1/1:1,26:27:66.20:762,66,0	0/0:10,0:10:27.01:0,27,246	0/0:19,0:19:48.02:0,48,439	0/0:13,0:13:38.98:0,39,344	1/1:1,15:16:42.12:485,42,0	1/1:6,29:35:87.25:998,87,0	1/1:2,33:35:68.82:1046,69,0	1/1:0,3:3:9.03:104,9,0
chr10	66894048	.	G	GA	12130.44	PASS	AB=0.675;AC=35;AF=0.625;AN=56;BaseQRankSum=-7.425;DP=694;FS=15.845;HRun=9;HaplotypeScore=88.0722;InbreedingCoeff=0.8382;MQ=75.07;MQ0=0;MQRankSum=-2.365;QD=24.81;ReadPosRankSum=1.513;VQSLOD=3.9058;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:68.97:0,69,599	0/0:14,0:14:32.99:0,33,286	0/1:17,0:19:15.56:16,0,163	0/0:18,1:19:23.39:0,23,180	0/0:29,0:29:77.98:0,78,677	1/1:3,23:26:60.16:664,60,0	1/1:4,15:19:42.11:465,42,0	0/0:33,0:33:86.96:0,87,753	1/1:3,28:31:55.17:837,55,0	1/1:5,23:28:23.17:704,23,0	1/1:2,22:24:63.06:668,63,0	1/1:7,27:34:35.13:842,35,0	0/0:26,0:26:65.93:0,66,564	0/1:6,15:21:0.97:445,0,1	1/1:3,26:30:75.04:811,75,0	1/1:3,16:19:39.11:431,39,0	1/1:1,12:14:38.92:404,39,0	1/1:1,10:12:23.10:293,23,0	1/1:5,20:25:37.14:614,37,0	1/1:5,35:40:99:1121,105,0	0/1:3,19:22:0.71:447,0,1	0/0:12,0:12:32.99:0,33,286	0/0:31,0:31:80.90:0,81,694	0/0:11,0:11:29.99:0,30,260	1/1:1,27:30:83.89:891,84,0	1/1:4,27:32:57.99:831,58,0	1/1:2,37:39:85.08:1148,85,0	1/1:4,19:23:45.59:499,46,0
chr10	66894077	.	CTG	C	2651.27	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-0.943;DP=675;FS=1.029;HRun=0;HaplotypeScore=135.1328;InbreedingCoeff=0.9990;MQ=80.70;MQ0=0;MQRankSum=-5.551;QD=38.42;ReadPosRankSum=1.187;VQSLOD=5.4132;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,33:33:90.31:1378,90,0	1/1:1,11:12:24.08:368,24,0	0/0:18,0:18:51.17:0,51,963	0/0:17,0:17:48.11:0,48,839	1/1:0,24:24:69.23:1049,69,0	0/0:26,0:26:78.22:0,78,1405	0/0:18,0:18:51.16:0,51,952	0/0:36,0:36:96.23:0,96,1816	0/0:27,0:27:78.24:0,78,1439	0/0:26,0:26:75.22:0,75,1405	0/0:25,0:25:75.26:0,75,1439	0/0:29,0:29:84.27:0,84,1588	0/0:24,0:24:72.25:0,72,1390	0/0:26,0:26:75.26:0,75,1448	0/0:31,0:31:90.17:0,90,1728	0/0:24,0:24:66.21:0,66,1242	0/0:16,0:16:48.16:0,48,926	0/0:12,0:12:33.11:0,33,637	0/0:32,0:32:96.31:0,96,1781	0/0:30,0:30:90.29:0,90,1686	0/0:28,0:28:75.26:0,75,1448	0/0:13,0:13:33.11:0,33,637	0/0:27,0:27:81.26:0,81,1519	0/0:11,0:11:33.11:0,33,637	0/0:29,0:29:75.21:0,75,1349	0/0:25,0:25:75.24:0,75,1399	0/0:42,0:41:99:0,120,2265	0/0:14,0:14:42.14:0,42,811
chr10	66895422	.	T	TA	662.28	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=-4.916;DP=462;FS=0.000;HRun=9;HaplotypeScore=43.6770;InbreedingCoeff=0.5831;MQ=68.99;MQ0=2;MQRankSum=0.226;QD=15.77;ReadPosRankSum=-1.636;VQSLOD=2.8555;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:59.98:0,60,521	0/0:6,0:6:18:0,18,156	0/0:12,0:10:8.70:0,9,78	0/1:12,0:12:3.89:4,0,43	1/1:5,25:30:72.07:756,72,0	0/0:22,1:24:19.83:0,20,390	0/0:8,0:8:24:0,24,208	0/0:32,0:32:83.92:0,84,717	0/0:8,0:8:20.99:0,21,182	0/0:20,0:19:41.95:0,42,363	0/0:19,0:19:53.99:0,54,469	0/0:16,0:17:44.01:0,44,367	0/0:15,1:16:8.81:0,9,305	0/0:7,0:7:21:0,21,182	0/0:10,0:11:23.03:0,23,188	0/0:16,0:16:32.98:0,33,287	0/0:17,0:17:44.98:0,45,391	0/0:22,0:22:53.98:0,54,469	0/0:21,0:20:53.99:0,54,469	0/0:17,1:18:11.80:0,12,331	0/0:5,0:5:12:0,12,104	0/0:14,0:15:26:0,26,211	0/0:19,0:19:47.96:0,48,409	0/0:7,0:7:9:0,9,78	0/0:20,0:20:59.96:0,60,515	0/0:20,0:20:47.98:0,48,417	0/0:29,0:29:62.95:0,63,547	0/0:5,0:5:11.99:0,12,104
chr10	66896238	.	C	CT	460.06	PASS	AC=2;AF=0.037;AN=54;BaseQRankSum=-5.341;DP=362;FS=20.928;HRun=8;HaplotypeScore=34.9390;InbreedingCoeff=0.5746;MQ=65.12;MQ0=1;MQRankSum=0.946;QD=27.06;ReadPosRankSum=1.113;VQSLOD=1.9166;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:30.01:0,30,275	0/0:6,0:6:18.01:0,18,165	0/0:3,0:2:3:0,3,27	0/0:4,0:4:2:0,2,26	1/1:0,17:17:48.14:554,48,0	0/0:13,0:13:38.96:0,39,344	0/0:9,0:9:24.01:0,24,220	0/0:32,0:32:78.01:0,78,710	0/0:8,0:8:15.01:0,15,137	0/0:27,0:27:75.03:0,75,687	0/0:18,0:18:45:0,45,411	0/0:8,0:8:24.01:0,24,220	0/0:13,0:13:30.01:0,30,275	0/0:9,0:9:24.01:0,24,218	0/0:7,0:7:18.01:0,18,165	0/0:11,0:11:27.01:0,27,247	0/0:22,0:21:56.98:0,57,508	0/0:12,0:11:30.02:0,30,275	0/0:22,0:22:48.01:0,48,436	0/0:18,0:18:47.95:0,48,428	0/0:2,0:2:6:0,6,55	0/0:2,0:2:3:0,3,27	0/0:13,0:13:33.02:0,33,302	./.	0/0:16,0:16:42:0,42,380	0/0:26,0:26:75.04:0,75,686	0/0:19,0:19:50.99:0,51,457	0/0:11,0:11:33.02:0,33,302
chr10	66896383	.	T	TC	14397.45	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-10.336;DP=428;FS=6.892;HRun=1;HaplotypeScore=38.8695;InbreedingCoeff=0.9511;MQ=81.27;MQ0=1;MQRankSum=-4.920;QD=40.44;ReadPosRankSum=2.414;VQSLOD=4.9358;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,29:30:81.27:1213,81,0	1/1:0,6:6:18.06:270,18,0	0/0:17,0:16:27.53:0,28,491	0/0:23,0:20:51.63:0,52,650	1/1:1,20:21:57.19:853,57,0	1/1:1,16:17:48.12:694,48,0	1/1:0,18:18:45.15:675,45,0	1/1:1,31:32:87.28:1284,87,0	1/1:1,12:13:33.11:495,33,0	1/1:0,12:12:36.12:540,36,0	1/1:0,17:17:51.17:764,51,0	1/1:1,7:8:18.06:270,18,0	0/0:9,0:9:27.09:0,27,351	1/1:0,8:8:24.08:358,24,0	1/1:0,15:15:33.11:495,33,0	1/1:0,9:9:27.09:403,27,0	1/1:0,27:27:72.24:1079,72,0	1/1:2,10:12:30.10:443,30,0	1/1:1,19:20:57.18:830,57,0	1/1:0,8:8:24.08:360,24,0	1/1:0,30:30:84.28:1259,84,0	0/0:2,0:2:6.02:0,6,78	0/0:7,0:7:18.06:0,18,234	0/0:14,0:14:39.13:0,39,506	1/1:0,16:16:48.16:719,48,0	1/1:1,15:16:48.11:674,48,0	1/1:1,17:18:42.14:630,42,0	1/1:0,3:3:6.02:90,6,0
chr10	66897503	.	AT	A	1206.23	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.733;DP=550;FS=0.000;HRun=1;HaplotypeScore=49.1013;InbreedingCoeff=0.9016;MQ=77.43;MQ0=0;MQRankSum=-2.880;QD=36.55;ReadPosRankSum=-3.121;VQSLOD=2.5339;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:66.20:0,66,1009	0/0:2,0:2:6.02:0,6,96	0/0:15,0:15:41.64:0,42,591	0/0:9,0:8:21.07:0,21,320	0/0:39,0:39:99:0,114,1822	0/0:18,0:18:54.18:0,54,863	0/0:15,0:15:45.15:0,45,720	1/1:0,33:33:93.31:1301,93,0	0/0:14,0:14:42.14:0,42,671	0/0:19,0:19:57.19:0,57,872	0/0:23,0:23:69.23:0,69,1091	0/0:19,0:19:57.19:0,57,906	0/0:14,0:14:42.14:0,42,669	0/0:18,0:18:54.18:0,54,859	0/0:24,0:24:72.25:0,72,1151	0/0:21,0:21:63.21:0,63,1007	0/0:15,0:15:42.14:0,42,669	0/0:16,0:16:45.15:0,45,715	0/0:24,0:24:72.24:0,72,1131	0/0:24,0:24:72.25:0,72,1151	0/0:19,0:19:57.19:0,57,911	0/0:14,0:14:42.14:0,42,669	0/0:16,0:16:48.16:0,48,757	0/0:14,0:14:42.12:0,42,646	0/0:30,0:30:90.29:0,90,1416	0/0:26,0:26:78.27:0,78,1236	0/0:35,0:35:99:0,105,1651	0/0:11,0:11:33.03:0,33,437
chr10	66899675	.	TA	T	432.87	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=6.378;DP=438;FS=16.769;HRun=8;HaplotypeScore=53.0557;InbreedingCoeff=0.4274;MQ=68.22;MQ0=1;MQRankSum=-1.291;QD=6.37;ReadPosRankSum=-3.123;VQSLOD=-0.5181;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:32:38.57:0,39,277	0/1:6,0:6:7.11:7,0,38	0/1:19,0:15:7.62:8,0,195	0/0:11,0:8:8.56:0,9,147	0/0:18,0:18:22.45:0,22,169	0/0:17,0:17:42.09:0,42,491	0/0:14,0:14:33.01:0,33,365	0/1:21,0:21:5.17:35,0,5	0/0:20,0:20:57.17:0,57,678	0/0:22,0:22:60.16:0,60,703	0/0:18,0:18:42.11:0,42,487	0/0:20,0:20:57.17:0,57,678	0/0:10,0:10:24.07:0,24,290	0/0:11,0:11:33.10:0,33,398	0/0:12,0:12:33.09:0,33,388	0/0:12,0:12:33.10:0,33,398	0/0:20,0:20:54.13:0,54,618	0/0:14,0:14:39.12:0,39,468	1/1:4,18:21:54.03:499,54,0	0/0:21,0:21:60.18:0,60,720	0/0:14,0:14:39.11:0,39,459	0/0:8,0:8:18.06:0,18,217	0/0:11,0:11:24.07:0,24,287	0/0:11,0:11:30.08:0,30,352	0/0:19,1:20:28.18:0,28,610	0/0:12,0:12:33.10:0,33,398	0/0:15,0:15:42.12:0,42,496	0/0:5,0:6:12.04:0,12,145
chr10	66899683	.	AG	A	489.37	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=8.538;DP=449;FS=10.529;HRun=7;HaplotypeScore=55.4199;InbreedingCoeff=0.6345;MQ=71.27;MQ0=1;MQRankSum=-0.289;QD=10.20;ReadPosRankSum=-3.137;VQSLOD=0.1284;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:35:99:0,102,1147	0/0:7,0:7:18.03:0,18,205	0/0:20,0:16:22.90:0,23,254	0/0:13,0:10:14.85:0,15,155	0/0:17,0:17:48.13:0,48,567	0/0:15,0:15:45.12:0,45,532	0/0:11,0:11:27.08:0,27,334	1/1:1,24:25:67.79:581,68,0	0/0:18,0:18:54.13:0,54,641	0/0:22,0:22:63.18:0,63,752	0/0:17,0:17:45.10:0,45,517	0/0:20,0:20:57.17:0,57,692	0/0:10,0:10:30.07:0,30,346	0/0:12,0:12:36.10:0,36,433	0/0:12,0:12:33.04:0,33,389	0/0:11,0:11:33.10:0,33,408	0/0:19,0:19:51.11:0,51,603	0/0:16,0:16:47.97:0,48,526	0/1:23,0:22:11.73:12,0,68	0/0:22,0:22:66.17:0,66,775	0/0:15,0:15:42.11:0,42,495	0/0:9,0:9:27.05:0,27,297	0/0:11,0:11:29.80:0,30,321	0/0:17,0:17:48.07:0,48,509	0/0:19,0:19:51.73:0,52,652	0/0:12,0:12:36.11:0,36,435	0/0:16,0:16:45.03:0,45,506	0/0:4,0:4:12.04:0,12,148
chr10	66899873	.	AAC	A	12095.96	PASS	AB=1.000;AC=41;AF=0.732;AN=56;BaseQRankSum=6.335;DP=568;FS=8.375;HRun=0;HaplotypeScore=147.5041;InbreedingCoeff=0.7835;MQ=71.39;MQ0=1;MQRankSum=-3.407;QD=26.24;ReadPosRankSum=1.836;VQSLOD=5.7410;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:26:1.58:139,0,2	0/1:4,0:4:3.52:15,0,4	0/0:27,0:23:46.71:0,47,621	0/0:17,0:14:24.03:0,24,292	1/1:4,25:29:69.94:790,70,0	1/1:2,16:18:45.45:537,45,0	1/1:4,17:20:59.93:713,60,0	0/1:29,0:29:54.27:144,0,54	1/1:3,15:18:41.89:571,42,0	1/1:3,12:15:31.33:404,31,0	1/1:3,14:17:42.87:483,43,0	1/1:1,24:25:58.08:808,58,0	0/0:22,0:22:66.12:0,66,955	1/1:2,17:19:42.05:548,42,0	1/1:1,27:28:60.03:758,60,0	1/1:0,19:19:43.57:530,44,0	1/1:3,18:21:46.62:561,47,0	1/1:0,9:9:21.07:297,21,0	1/1:8,12:20:45.22:478,45,0	1/1:5,20:25:67.72:726,68,0	1/1:5,20:25:46.52:631,47,0	0/0:14,0:14:42.11:0,42,646	0/0:14,0:14:42.02:0,42,649	0/0:13,0:13:39.12:0,39,629	1/1:4,24:28:74.99:914,75,0	1/1:3,23:26:77.37:868,77,0	1/1:6,27:33:82.77:1026,83,0	1/1:3,3:6:14.96:153,15,0
chr10	66899874	.	AC	A	7107.74	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=9.730;DP=557;FS=5.189;HRun=1;HaplotypeScore=153.4262;InbreedingCoeff=0.9807;MQ=70.97;MQ0=1;MQRankSum=-4.532;QD=15.79;ReadPosRankSum=2.065;VQSLOD=5.1374;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:22,4:26:69.43:432,69,0	1/1:4,0:4:10.44:58,10,0	0/0:26,0:22:44.10:0,44,468	0/0:16,0:14:12.08:0,12,182	1/1:27,1:28:68.56:455,69,0	1/1:17,0:18:44.92:284,45,0	1/1:19,1:20:59.16:389,59,0	1/1:29,0:29:60.12:406,60,0	1/1:17,0:17:34:259,34,0	1/1:15,0:15:35.26:243,35,0	1/1:16,0:16:38.87:269,39,0	1/1:24,0:24:56.16:367,56,0	0/0:22,0:22:66.11:0,66,779	1/1:18,0:18:41.41:271,41,0	1/1:28,0:28:59.16:388,59,0	1/1:19,0:19:36.89:265,37,0	1/1:20,0:21:39.30:264,39,0	1/1:9,0:9:20.69:135,21,0	1/1:17,0:17:38.41:283,38,0	1/1:23,0:24:58.04:389,58,0	1/1:22,0:24:45.41:307,45,0	0/0:15,0:15:42.08:0,42,510	0/0:14,0:14:42.01:0,42,517	0/0:13,0:13:39.11:0,39,499	1/1:26,0:27:73.61:476,74,0	1/1:25,1:26:74.56:513,75,0	1/1:31,1:33:73.54:493,74,0	1/1:3,3:6:14.94:162,15,0
chr10	66899875	.	CAAA	C	11477.82	PASS	AB=0.977;AC=41;AF=0.732;AN=56;BaseQRankSum=7.035;DP=562;FS=5.979;HRun=9;HaplotypeScore=158.6110;InbreedingCoeff=0.7278;MQ=71.67;MQ0=1;MQRankSum=-5.716;QD=25.23;ReadPosRankSum=3.283;VQSLOD=1.9853;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:25,1:26:99:206,0,102	0/1:4,0:4:12.37:23,0,12	0/0:25,0:21:39.66:0,40,900	0/0:17,0:15:27.06:0,27,431	1/1:27,2:29:71.95:754,72,0	1/1:19,0:19:47.95:515,48,0	1/1:21,0:20:60.05:625,60,0	0/1:28,1:29:99:306,0,168	1/1:15,2:17:48.14:586,48,0	1/1:15,1:16:21.15:408,21,0	1/1:14,2:16:45.12:527,45,0	1/1:24,0:24:57.14:637,57,0	0/0:22,0:22:66.22:0,66,1498	1/1:17,1:18:42.10:466,42,0	1/1:27,1:28:60.16:679,60,0	1/1:19,0:19:40.70:471,41,0	1/1:19,2:21:45.24:537,45,0	1/1:10,0:10:24.04:248,24,0	1/1:14,3:17:36.41:450,36,0	1/1:22,2:24:67.73:771,68,0	1/1:22,2:24:56.72:582,57,0	0/0:15,0:15:45.13:0,45,962	0/0:14,0:14:42.14:0,42,992	0/0:13,0:13:39.08:0,39,857	1/1:25,2:27:75.17:856,75,0	1/1:26,1:27:75.66:816,76,0	1/1:29,4:33:82.07:904,82,0	1/1:6,0:6:14.63:113,15,0
chr10	66899878	.	A	AC	7023.83	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=10.783;DP=560;FS=11.065;HRun=0;HaplotypeScore=157.0180;InbreedingCoeff=0.9801;MQ=70.69;MQ0=1;MQRankSum=-3.257;QD=15.34;ReadPosRankSum=1.403;VQSLOD=6.1728;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:26:50.83:280,51,0	1/1:4,0:4:9.56:45,10,0	0/0:22,1:20:20.35:0,20,528	0/0:16,0:13:14.19:0,14,245	1/1:28,0:28:73.33:468,73,0	1/1:19,0:19:43.62:276,44,0	1/1:21,0:20:57.78:360,58,0	1/1:24,3:27:40.60:401,41,0	1/1:18,0:18:39.80:282,40,0	1/1:17,0:17:41.48:318,41,0	1/1:16,0:16:40:245,40,0	1/1:24,0:24:55.86:371,56,0	0/0:22,0:22:66.22:0,66,919	1/1:16,0:16:40.99:257,41,0	1/1:28,0:28:57.83:374,58,0	1/1:18,0:18:28.52:244,29,0	1/1:21,0:21:43.30:291,43,0	1/1:11,0:11:23.47:150,23,0	1/1:15,0:15:25.61:263,26,0	1/1:24,0:24:56.89:346,57,0	1/1:26,0:26:62.10:418,62,0	0/0:14,0:14:42.12:0,42,567	0/0:15,0:15:42.14:0,42,587	0/0:11,0:11:33.11:0,33,461	1/1:31,0:31:83.86:563,84,0	1/1:28,0:28:75.57:495,76,0	1/1:34,0:34:77.82:482,78,0	1/1:6,0:6:14.67:95,15,0
chr10	66900486	.	GAGGAAGGAAGGA	G	11431.54	PASS	AB=0.733;AC=33;AF=0.660;AN=50;BaseQRankSum=9.176;DP=621;FS=9.926;HRun=0;HaplotypeScore=284.9588;InbreedingCoeff=0.7827;MQ=62.08;MQ0=3;MQRankSum=-9.408;QD=28.87;ReadPosRankSum=-0.751;VQSLOD=2.4568;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:28:33.58:0,34,888	0/0:4,0:7:12.04:0,12,366	./.	./.	0/0:29,0:29:36.12:0,36,1722	1/1:18,6:24:15.05:512,15,0	1/1:13,0:13:2.99:24,3,0	0/0:21,0:21:3.48:0,3,88	1/1:12,10:22:24.08:813,24,0	1/1:15,9:24:30.09:948,30,0	1/1:16,8:24:15.05:512,15,0	1/1:14,14:28:29.77:1024,30,0	0/0:32,0:31:48.15:0,48,2462	1/1:15,9:24:33.11:1116,33,0	1/1:31,10:41:24.08:820,24,0	1/1:18,13:31:36.12:1229,36,0	./.	0/1:7,4:11:99:295,0,141	1/1:17,6:23:15.05:471,15,0	1/1:16,8:24:21.07:717,21,0	1/1:12,7:19:3.01:102,3,0	0/0:18,0:18:30.55:0,31,1289	0/0:18,0:18:27.08:0,27,1303	0/0:26,0:26:48.16:0,48,2699	1/1:17,9:26:24.08:798,24,0	1/1:17,11:28:27.09:922,27,0	1/1:18,11:30:30.10:1024,30,0	1/1:3,1:4:3.01:102,3,0
chr10	66904027	.	C	CTTTTT	8366.09	PASS	AB=0.550;AC=43;AF=0.768;AN=56;BaseQRankSum=-0.864;DP=436;FS=8.685;HRun=10;HaplotypeScore=86.5344;InbreedingCoeff=0.6966;MQ=65.40;MQ0=4;MQRankSum=-2.741;QD=24.61;ReadPosRankSum=-0.911;VQSLOD=2.0051;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:26:40.31:304,40,0	1/1:1,0:9:16.07:67,16,0	0/0:22,0:8:7.33:0,7,73	0/0:30,0:19:4.23:0,4,85	1/1:7,0:30:50.67:458,51,0	1/1:1,9:12:15.05:406,15,0	1/1:2,1:5:6.02:141,6,0	1/1:8,0:34:71.04:362,71,0	1/1:0,8:8:5.69:95,6,0	1/1:0,9:12:30.10:703,30,0	1/1:0,10:14:23.98:417,24,0	1/1:9,0:9:5.93:72,6,0	0/0:12,0:12:36.08:0,36,533	1/1:4,4:9:5.01:89,5,0	1/1:2,8:11:12.04:334,12,0	1/1:4,6:11:6.02:135,6,0	0/1:4,15:22:25.61:589,0,26	1/1:10,0:10:23.91:533,24,0	1/1:5,12:21:54.50:890,55,0	1/1:1,11:18:29.93:494,30,0	1/1:2,6:8:5.97:98,6,0	0/0:3,0:3:4.81:0,5,53	0/0:13,0:13:30.02:0,30,458	0/0:11,0:11:24.03:0,24,380	1/1:4,7:13:15.05:333,15,0	1/1:3,18:25:56.80:1179,57,0	1/1:3,10:17:15.04:250,15,0	1/1:2,8:11:15.05:418,15,0
chr10	66904242	.	C	CA	790.36	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-7.361;DP=394;FS=20.262;HRun=8;HaplotypeScore=36.6152;InbreedingCoeff=0.7977;MQ=74.90;MQ0=0;MQRankSum=-0.100;QD=24.70;ReadPosRankSum=-3.838;VQSLOD=1.1855;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:75.01:0,75,681	0/0:3,0:3:9:0,9,82	0/0:10,0:10:23.01:0,23,207	0/0:7,0:7:14.90:0,15,123	0/0:21,0:21:54:0,54,485	0/0:13,0:13:39.02:0,39,357	0/0:5,0:5:15.01:0,15,137	1/1:6,26:32:78.19:885,78,0	0/0:17,0:17:45.02:0,45,412	0/0:15,0:15:42.02:0,42,384	0/0:17,0:17:45.02:0,45,412	0/0:8,0:8:24.01:0,24,220	0/0:10,0:10:27.01:0,27,247	0/0:16,0:16:44.06:0,44,390	0/0:9,0:9:21.01:0,21,192	0/0:12,0:12:27.01:0,27,247	0/0:20,0:20:54.03:0,54,494	0/0:2,0:2:6:0,6,55	0/0:20,0:20:48:0,48,435	0/0:15,0:15:42.02:0,42,384	0/0:16,0:16:39.01:0,39,357	0/0:7,0:7:21:0,21,188	0/0:8,0:8:18:0,18,165	0/0:11,0:11:29.97:0,30,266	0/0:22,0:22:63.02:0,63,571	0/0:21,0:21:60.01:0,60,545	0/0:24,0:23:66.03:0,66,604	0/0:6,0:6:12.01:0,12,110
chr10	66904743	.	T	TAAAA	16937.44	PASS	AB=0.971;AC=45;AF=0.804;AN=56;BaseQRankSum=7.989;DP=575;FS=21.890;HRun=11;HaplotypeScore=165.5663;InbreedingCoeff=0.7864;MQ=60.96;MQ0=1;MQRankSum=-9.912;QD=35.58;ReadPosRankSum=-4.020;VQSLOD=0.6980;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:12,0:20:46.06:420,46,0	1/1:3,0:6:12:113,12,0	0/1:33,0:26:17.38:17,0,388	0/0:22,0:18:16.95:0,17,261	1/1:9,1:30:72.22:997,72,0	1/1:11,7:21:57.18:1060,57,0	1/1:8,3:10:1.21:312,1,0	1/1:26,0:34:53.85:659,54,0	1/1:9,2:11:21.07:394,21,0	1/1:22,9:33:77.50:1407,77,0	1/1:11,9:21:45.11:883,45,0	1/1:15,7:26:57.19:1093,57,0	0/0:22,0:23:57.11:0,57,726	1/1:6,1:7:13.55:194,14,0	1/1:11,8:20:51.16:942,51,0	1/1:13,13:29:66.22:1325,66,0	1/1:11,9:21:48.08:925,48,0	1/1:8,1:9:8.02:161,8,0	1/1:14,3:21:39.13:707,39,0	1/1:22,6:28:60.16:1117,60,0	1/1:0,0:2:3.01:41,3,0	0/0:20,0:22:50.99:0,51,657	0/0:14,0:14:29.97:0,30,408	0/0:17,0:17:51.12:0,51,660	1/1:19,8:30:66.69:1169,67,0	1/1:12,5:20:55.73:1010,56,0	1/1:18,11:29:69.22:1432,69,0	1/1:3,6:10:27.09:558,27,0
chr10	66904784	.	T	TA	13327.03	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=0.169;DP=508;FS=0.000;HRun=5;HaplotypeScore=90.9003;InbreedingCoeff=0.9887;MQ=74.85;MQ0=0;MQRankSum=-6.981;QD=32.66;ReadPosRankSum=0.485;VQSLOD=4.8589;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,16:16:39.08:493,39,0	1/1:0,8:8:24.08:316,24,0	0/0:16,0:17:34.62:0,35,347	0/0:14,0:13:23.72:0,24,258	1/1:7,27:34:75.24:987,75,0	1/1:5,17:22:51.16:661,51,0	1/1:2,7:9:18.06:230,18,0	1/1:9,35:44:99:1418,108,0	1/1:1,12:13:36.12:474,36,0	1/1:7,24:31:75.21:949,75,0	1/1:2,19:21:57.14:724,57,0	1/1:2,16:18:51.10:645,51,0	0/0:24,0:24:66.17:0,66,709	1/1:0,7:7:18.06:236,18,0	1/1:0,12:12:33.10:423,33,0	1/1:4,14:18:42.14:552,42,0	1/1:0,15:15:39.13:506,39,0	1/1:1,6:7:15.05:197,15,0	1/1:2,18:20:57.17:736,57,0	1/1:4,20:24:60.19:780,60,0	1/1:0,5:5:15.05:197,15,0	0/0:16,0:16:42.08:0,42,435	0/0:20,0:20:57.12:0,57,603	0/0:9,0:9:24.06:0,24,257	1/1:3,28:31:81.26:1050,81,0	1/1:3,18:21:54.15:693,54,0	1/1:3,20:23:54.17:705,54,0	1/1:0,9:8:27.09:355,27,0
chr10	66905884	.	ATG	A	8255.81	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=3.821;DP=241;FS=0.000;HRun=0;HaplotypeScore=28.4587;InbreedingCoeff=0.8707;MQ=71.22;MQ0=0;MQRankSum=-2.133;QD=39.69;ReadPosRankSum=3.159;VQSLOD=6.3233;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,10:10:21.07:321,21,0	1/1:0,6:6:18.06:276,18,0	0/0:6,0:6:15.03:0,15,256	0/0:3,0:3:6.02:0,6,98	1/1:1,7:8:18.06:276,18,0	1/1:0,11:11:27.09:413,27,0	1/1:0,3:3:6.02:92,6,0	1/1:1,37:38:99:1609,108,0	1/1:0,4:4:12.04:184,12,0	1/1:0,8:8:24.08:368,24,0	1/1:0,4:4:9.03:138,9,0	1/1:0,6:6:18.06:276,18,0	0/0:9,0:9:27.09:0,27,520	1/1:0,8:8:18.06:276,18,0	1/1:1,10:11:27.09:413,27,0	1/1:2,8:10:21.07:322,21,0	1/1:0,22:22:57.19:873,57,0	1/1:0,4:4:12.04:184,12,0	1/1:0,11:11:33.11:502,33,0	1/1:0,3:3:9.03:130,9,0	1/1:0,7:7:18.06:276,18,0	0/0:5,0:5:15.04:0,15,257	0/0:7,0:7:21.07:0,21,405	0/0:3,0:3:9.03:0,9,174	1/1:0,3:3:6.02:92,6,0	1/1:0,5:5:15.05:230,15,0	1/1:0,14:14:39.13:594,39,0	1/1:1,11:12:27.09:413,27,0
chr10	66907161	.	AAC	A	2757.72	PASS	AB=0.948;AC=27;AF=0.482;AN=56;BaseQRankSum=8.216;DP=526;FS=21.325;HRun=0;HaplotypeScore=95.5647;InbreedingCoeff=0.3592;MQ=84.31;MQ0=4;MQRankSum=-2.643;QD=7.83;ReadPosRankSum=10.696;VQSLOD=0.8004;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:92.90:0,93,1080	0/0:16,0:16:46.70:0,47,592	0/0:18,0:17:38.82:0,39,482	0/0:25,0:24:25.79:0,26,459	0/0:13,0:13:20.39:0,20,182	1/1:17,1:18:11.29:122,11,0	0/1:23,4:27:99:247,0,120	0/0:15,0:15:33.04:0,33,348	1/1:20,1:20:27.38:222,27,0	0/1:16,0:16:52.38:75,0,52	1/1:18,1:19:13.89:168,14,0	1/1:22,3:25:8.16:236,8,0	0/0:18,0:18:42.04:0,42,512	1/1:24,3:27:46.75:264,47,0	1/1:24,0:24:35.56:221,36,0	0/1:15,2:17:17.89:125,0,18	0/1:24,3:26:0.63:235,0,1	1/1:2,1:3:7.94:51,8,0	0/1:15,1:16:75.83:102,0,76	0/1:22,2:24:20.94:155,0,21	0/1:8,0:8:11.39:11,0,52	0/0:13,0:13:35.99:0,36,420	0/0:10,0:10:22.54:0,23,208	0/0:14,0:14:29.59:0,30,385	0/1:23,0:22:13.50:130,0,13	0/1:12,0:12:39.58:40,0,67	1/1:35,7:41:71.40:522,71,0	1/1:3,0:3:7.32:29,7,0
chr10	66907164	.	ACC	A	8515.94	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-5.499;DP=509;FS=16.528;HRun=11;HaplotypeScore=75.0925;InbreedingCoeff=0.9525;MQ=84.40;MQ0=4;MQRankSum=-2.886;QD=24.68;ReadPosRankSum=6.376;VQSLOD=2.6835;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:58.85:0,59,518	0/0:15,0:15:40.88:0,41,378	0/0:18,0:17:26.96:0,27,330	0/0:23,0:23:26.53:0,27,263	0/0:9,0:9:12:0,12,126	1/1:2,16:18:42.07:436,42,0	1/1:11,15:26:54.11:572,54,0	0/0:8,0:12:8.91:0,9,65	1/1:2,19:20:54.13:575,54,0	1/1:3,12:15:36.08:383,36,0	1/1:3,12:15:42.11:445,42,0	1/1:5,20:25:60.12:632,60,0	0/0:15,0:16:30:0,30,314	1/1:4,23:27:69.17:734,69,0	1/1:1,23:24:63.15:671,63,0	1/1:5,12:17:42.10:447,42,0	1/1:6,21:26:63.15:670,63,0	1/1:1,2:3:9.02:96,9,0	1/1:4,12:17:14.85:360,15,0	1/1:3,19:22:51.10:542,51,0	1/1:3,4:7:9.01:96,9,0	0/0:14,0:14:21.04:0,21,279	0/0:11,0:11:12.77:0,13,150	0/0:13,0:13:26.78:0,27,284	1/1:4,18:23:44.58:438,45,0	1/1:5,8:13:20.96:210,21,0	1/1:8,33:40:99:1115,105,0	1/1:0,3:3:9.02:96,9,0
chr10	66908953	.	GA	G	11633	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=7.310;DP=598;FS=0.000;HRun=9;HaplotypeScore=62.1087;InbreedingCoeff=0.9780;MQ=71.32;MQ0=0;MQRankSum=-2.110;QD=23.69;ReadPosRankSum=1.582;VQSLOD=5.6456;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,20:21:54.03:494,54,0	1/1:0,9:9:24.01:220,24,0	0/0:11,0:11:20.38:0,20,196	0/0:10,0:10:14.86:0,15,143	1/1:2,30:32:87.03:796,87,0	1/1:2,23:25:28.41:515,28,0	1/1:0,7:7:15.01:137,15,0	1/1:6,31:37:78.28:857,78,0	1/1:1,14:15:42.02:384,42,0	1/1:2,29:31:87.05:796,87,0	1/1:1,30:31:78.03:713,78,0	1/1:2,19:21:51.03:467,51,0	0/0:29,0:29:72.19:0,72,807	1/1:2,12:14:36.02:330,36,0	1/1:3,21:24:56.87:522,57,0	1/1:3,23:26:55.26:626,55,0	1/1:1,14:15:39.02:357,39,0	1/1:0,8:8:21.01:192,21,0	1/1:4,21:25:63.03:577,63,0	1/1:4,33:37:99:905,99,0	1/1:1,14:15:36.02:330,36,0	0/0:14,0:14:42.12:0,42,485	0/0:30,0:30:87.14:0,87,975	0/0:12,1:13:8.62:0,9,343	1/1:0,20:20:60.03:549,60,0	1/1:3,24:27:72.04:659,72,0	1/1:3,26:29:75.04:686,75,0	1/1:1,21:22:57.03:522,57,0
chr10	66909929	.	TTCGGTCCCCAGC	T	15986.98	PASS	AB=0.677;AC=40;AF=0.741;AN=54;BaseQRankSum=7.764;DP=289;FS=12.177;HRun=0;HaplotypeScore=138.6247;InbreedingCoeff=0.4958;MQ=37.93;MQ0=22;MQRankSum=-5.864;QD=66.06;ReadPosRankSum=1.931;VQSLOD=4.2989;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,7:13:12.04:334,12,0	1/1:0,2:2:3.01:114,3,0	./.	0/0:2,0:1:2.92:0,3,17	1/1:8,12:20:26.21:797,26,0	1/1:2,6:8:21.03:703,21,0	1/1:3,5:7:15.05:570,15,0	1/1:6,4:7:6.02:228,6,0	0/1:3,5:6:87.22:218,0,87	1/1:5,12:14:32.27:1251,32,0	1/1:8,10:17:39.08:1232,39,0	1/1:1,5:6:15.05:569,15,0	0/0:17,0:16:39.13:0,39,2390	1/1:3,5:8:18.06:681,18,0	1/1:2,10:11:30.10:1133,30,0	1/1:1,14:15:42.14:1586,42,0	0/1:4,5:7:99:543,0,271	0/1:4,2:6:99:216,0,210	1/1:6,4:6:12.04:408,12,0	1/1:7,8:14:30.10:1057,30,0	1/1:4,2:3:6.02:228,6,0	0/0:6,0:4:12.04:0,12,705	0/0:8,0:6:18.05:0,18,949	0/0:14,0:14:36.12:0,36,2001	1/1:3,12:15:36.12:1360,36,0	1/1:4,9:12:30.06:1045,30,0	1/1:3,12:14:39.08:1383,39,0	0/1:4,3:6:99:330,0,149
chr10	66909958	.	CAA	C	3694.24	PASS	AB=0.750;AC=36;AF=0.643;AN=56;BaseQRankSum=6.147;DP=359;FS=5.055;HRun=14;HaplotypeScore=134.3457;InbreedingCoeff=0.5823;MQ=48.04;MQ0=18;MQRankSum=-4.406;QD=14.26;ReadPosRankSum=3.126;VQSLOD=2.2188;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,1:26:23.10:0,23,539	0/0:3,0:3:3.01:0,3,42	0/0:13,0:5:4.20:0,4,22	0/1:10,0:7:13.75:14,0,28	0/0:18,0:20:38.57:0,39,480	1/1:2,11:14:23.56:253,24,0	0/1:4,2:7:30.02:71,0,30	0/1:10,2:20:13.16:13,0,178	1/1:2,4:4:6.01:55,6,0	1/1:3,11:14:26.44:281,26,0	1/1:3,11:15:29.63:309,30,0	1/1:2,3:7:17.34:121,17,0	0/0:9,0:8:17.95:0,18,207	1/1:2,7:10:20.76:178,21,0	1/1:2,11:13:26.85:297,27,0	1/1:3,10:14:32.72:289,33,0	0/1:6,5:10:43.62:127,0,44	1/1:3,4:6:10.77:88,11,0	1/1:3,9:11:14.39:183,14,0	1/1:4,13:17:29.63:309,30,0	1/1:4,4:4:9:83,9,0	0/0:6,0:4:12.04:0,12,168	0/0:8,0:7:11.52:0,12,135	0/0:14,0:14:26.98:0,27,331	1/1:3,14:20:15.63:371,16,0	1/1:3,9:12:20.90:241,21,0	1/1:6,9:15:29.75:262,30,0	1/1:1,8:10:5.76:149,6,0
chr10	66910559	.	T	TA	10858.25	PASS	AB=1.000;AC=45;AF=0.804;AN=56;BaseQRankSum=-9.894;DP=494;FS=14.947;HRun=7;HaplotypeScore=39.9635;InbreedingCoeff=0.8404;MQ=65.35;MQ0=0;MQRankSum=0.565;QD=25.98;ReadPosRankSum=-0.529;VQSLOD=3.4118;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,20:25:57.09:660,57,0	1/1:2,7:9:21.01:234,21,0	0/1:10,0:7:8.97:9,0,15	0/0:8,0:4:6.46:0,6,51	1/1:5,16:21:36.07:413,36,0	1/1:0,26:26:66.20:790,66,0	1/1:4,19:23:33.10:395,33,0	1/1:2,30:32:90.21:1020,90,0	1/1:1,9:10:15.05:179,15,0	1/1:4,17:21:51.13:589,51,0	1/1:2,16:18:48.06:541,48,0	1/1:1,18:19:51.16:610,51,0	0/0:15,0:15:42.04:0,42,392	1/1:1,11:12:30.09:359,30,0	1/1:0,30:29:63.19:754,63,0	1/1:1,17:18:42.13:503,42,0	1/1:2,17:19:42.13:503,42,0	1/1:4,18:22:45.10:522,45,0	1/1:7,11:18:33.02:345,33,0	1/1:1,13:14:39.08:450,39,0	1/1:0,8:8:18.06:216,18,0	0/0:20,0:20:51.04:0,51,478	0/0:24,0:24:72.10:0,72,688	0/0:9,0:9:27.04:0,27,260	1/1:2,11:13:30.01:340,30,0	1/1:3,22:25:63.18:744,63,0	1/1:2,22:24:54.17:646,54,0	1/1:0,1:1:3.01:36,3,0
chr10	66910825	.	A	AT	594.81	PASS	AB=1.000;AC=6;AF=0.107;AN=56;BaseQRankSum=1.588;DP=309;FS=1.759;HRun=7;HaplotypeScore=51.9060;InbreedingCoeff=0.6053;MQ=79.61;MQ0=0;MQRankSum=-0.669;QD=11.90;ReadPosRankSum=-2.420;VQSLOD=1.7544;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,18:20:51.11:598,51,0	1/1:0,3:3:9.03:108,9,0	0/1:13,0:13:1.83:2,0,124	0/1:14,0:14:5.65:6,0,153	0/0:20,0:20:38.74:0,39,370	0/0:13,0:13:39.06:0,39,376	0/0:10,0:10:20.96:0,21,191	0/0:13,0:12:36.06:0,36,348	0/0:3,0:3:9.01:0,9,87	0/0:14,0:14:33.05:0,33,318	0/0:8,0:8:18.03:0,18,174	0/0:8,0:8:21.03:0,21,203	0/0:20,0:20:60.10:0,60,579	0/0:9,0:9:24.03:0,24,231	0/0:4,0:4:9.01:0,9,87	0/0:5,0:5:12.01:0,12,115	0/0:7,0:7:15.02:0,15,145	0/0:5,0:5:12.02:0,12,116	0/0:11,0:11:33.05:0,33,319	0/0:10,0:10:27.03:0,27,256	0/0:9,0:9:24.04:0,24,232	0/0:23,0:23:63.09:0,63,602	0/0:21,0:21:63.10:0,63,608	0/0:17,0:17:48.08:0,48,464	0/0:14,0:14:36.05:0,36,347	0/0:5,0:5:15.02:0,15,140	0/0:7,0:7:21.01:0,21,193	0/0:3,0:3:9.01:0,9,87
chr10	66911646	.	CT	C	6430.37	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=0.692;DP=349;FS=5.587;HRun=8;HaplotypeScore=38.5189;InbreedingCoeff=0.8913;MQ=77.90;MQ0=2;MQRankSum=-2.355;QD=22.33;ReadPosRankSum=3.450;VQSLOD=4.8105;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,11:12:30.05:290,30,0	1/1:3,3:6:9.01:87,9,0	0/0:14,0:8:11.85:0,12,109	0/0:19,0:17:21.85:0,22,277	1/1:3,15:18:42.02:397,42,0	1/1:3,21:23:51.08:493,51,0	1/1:0,3:3:6.01:58,6,0	1/1:3,25:28:75.54:706,76,0	1/1:1,6:7:5.90:57,6,0	1/1:3,9:12:27.03:256,27,0	1/1:2,10:12:26.99:251,27,0	1/1:0,5:5:14.98:135,15,0	0/0:9,0:9:21.06:0,21,254	1/1:0,6:6:18.03:174,18,0	1/1:0,10:10:27.04:261,27,0	1/1:3,4:7:12.02:116,12,0	1/1:1,28:29:72.11:695,72,0	1/1:1,6:7:18.03:174,18,0	1/1:5,14:18:42.04:397,42,0	1/1:2,12:14:29.97:272,30,0	1/1:1,4:5:9.01:87,9,0	0/0:4,0:4:5.99:0,6,49	0/0:8,0:8:24.06:0,24,278	0/0:6,0:6:18.04:0,18,205	1/1:3,15:18:42.07:406,42,0	1/1:1,13:14:39.03:366,39,0	1/1:2,14:16:39.06:377,39,0	1/1:3,13:16:39.06:377,39,0
chr10	66912195	.	T	TGCATGCATGCATGCATG	33676.12	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=15.222;DP=728;FS=3.482;HRun=0;HaplotypeScore=398.5792;InbreedingCoeff=0.9816;MQ=51.40;MQ0=4;MQRankSum=-13.324;QD=59.08;ReadPosRankSum=4.588;VQSLOD=3.4553;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:32:47.44:901,47,0	1/1:7,0:9:24.07:555,24,0	0/0:24,0:20:59:0,59,2210	0/0:30,0:21:59.55:0,60,1786	1/1:35,2:37:47.56:888,48,0	1/1:19,6:25:56.64:1953,57,0	1/1:35,0:35:49.38:1397,49,0	1/1:30,0:26:46.43:1185,46,0	1/1:23,3:26:51.17:2274,51,0	1/1:26,1:28:57.93:2499,58,0	1/1:29,2:31:23.08:835,23,0	1/1:30,1:31:56.90:1492,57,0	0/0:32,0:32:94.13:0,94,3483	1/1:17,1:18:38.14:818,38,0	1/1:34,4:38:74.37:2783,74,0	1/1:22,4:26:62.49:2498,62,0	1/1:18,3:21:45.04:1419,45,0	1/1:7,1:8:7.08:367,7,0	1/1:23,0:23:33.24:1561,33,0	1/1:30,1:31:31.06:935,31,0	1/1:27,0:27:37.76:469,38,0	0/0:19,0:19:57.18:0,57,2302	0/0:22,0:22:66.20:0,66,2868	0/0:31,0:31:93.28:0,93,4037	1/1:17,1:18:41.81:1583,42,0	1/1:29,1:28:82.89:2884,83,0	1/1:27,6:33:88.10:2896,88,0	1/1:11,2:13:29.65:1486,30,0
chr10	66912950	.	A	AT	19909.83	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-14.317;DP=619;FS=1.677;HRun=1;HaplotypeScore=54.0866;InbreedingCoeff=0.9927;MQ=80.43;MQ0=0;MQRankSum=-5.910;QD=40.72;ReadPosRankSum=2.190;VQSLOD=5.3936;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,29:31:81.27:1213,81,0	1/1:0,11:11:27.09:405,27,0	0/0:24,0:24:69.16:0,69,841	0/0:19,0:19:48.07:0,48,559	1/1:0,24:24:72.24:1063,72,0	1/1:0,35:35:99:1484,99,0	1/1:1,10:11:24.08:360,24,0	1/1:2,36:38:99:1558,108,0	1/1:0,16:16:48.16:719,48,0	1/1:2,14:16:42.14:630,42,0	1/1:0,31:31:87.25:1267,87,0	1/1:1,15:16:45.15:674,45,0	0/0:17,0:17:48.16:0,48,623	1/1:1,17:18:45.15:674,45,0	1/1:1,23:24:63.21:933,63,0	1/1:0,24:24:63.21:945,63,0	1/1:1,13:14:42.06:592,42,0	1/1:0,4:4:12.04:180,12,0	1/1:1,23:24:69.23:1017,69,0	1/1:1,23:24:69.19:1002,69,0	1/1:1,38:39:99:1483,99,0	0/0:20,0:20:60.20:0,60,779	0/0:26,0:26:72.19:0,72,909	0/0:24,0:24:72.17:0,72,900	1/1:0,18:18:48.16:719,48,0	1/1:1,28:29:84.27:1239,84,0	1/1:0,34:33:93.32:1394,93,0	1/1:0,8:8:24.08:359,24,0
chr10	66913479	.	AT	A	1258.46	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=10.381;DP=578;FS=13.795;HRun=9;HaplotypeScore=59.9221;InbreedingCoeff=0.9381;MQ=61.70;MQ0=0;MQRankSum=1.331;QD=19.66;ReadPosRankSum=3.401;VQSLOD=3.1125;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,25:28:66.03:604,66,0	1/1:1,7:8:21.01:192,21,0	0/0:6,0:4:5.85:0,6,49	0/0:11,0:9:11.76:0,12,127	1/1:4,24:28:66.03:604,66,0	0/0:24,0:24:66.15:0,66,747	0/0:13,1:15:11.42:0,11,342	0/0:39,0:39:99:0,99,1108	0/0:16,0:16:39.10:0,39,441	0/0:22,0:22:48.14:0,48,545	0/0:20,0:20:51.15:0,51,588	0/0:19,1:20:26.64:0,27,536	0/0:20,0:20:51.15:0,51,586	0/0:20,1:21:30.86:0,31,568	0/0:21,0:21:51.15:0,51,589	0/0:15,0:15:39.06:0,39,426	0/0:27,0:27:69.20:0,69,796	0/0:15,0:14:39.07:0,39,425	0/0:27,0:27:75.22:0,75,866	0/0:25,0:25:63.19:0,63,727	0/0:21,0:21:51.15:0,51,589	0/0:20,0:20:48.14:0,48,554	0/0:15,1:17:41.96:0,42,465	0/0:19,0:19:45.13:0,45,519	0/0:20,0:21:56.98:0,57,626	0/0:24,0:25:60.01:0,60,672	0/0:24,0:24:60.16:0,60,681	0/0:22,0:22:57.16:0,57,649
chr10	66913997	.	TA	T	1094.09	PASS	AB=0.959;AC=36;AF=0.857;AN=42;BaseQRankSum=-2.152;DP=108;FS=9.224;HRun=1;HaplotypeScore=23.9627;InbreedingCoeff=0.1787;MQ=96.96;MQ0=2;MQRankSum=-3.475;QD=10.83;ReadPosRankSum=1.398;VQSLOD=0.8169;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	1/1:0,2:2:5.93:40,6,0	0/1:17,1:8:17.43:17,0,81	0/1:32,1:18:16.48:16,0,75	1/1:0,2:2:5.92:39,6,0	1/1:0,3:3:8.90:60,9,0	1/1:0,2:2:2.97:20,3,0	1/1:0,10:10:30.07:370,30,0	1/1:0,2:2:5.93:40,6,0	1/1:0,1:1:2.97:20,3,0	./.	1/1:0,1:1:3.01:42,3,0	0/0:2,0:2:3.01:0,3,46	./.	1/1:0,1:1:2.97:20,3,0	1/1:0,1:1:2.97:20,3,0	1/1:1,7:7:11.87:80,12,0	1/1:0,2:2:3.01:42,3,0	1/1:2,3:3:9.02:108,9,0	./.	./.	./.	./.	0/0:5,0:5:14.54:0,15,192	1/1:0,2:2:5.93:40,6,0	1/1:0,3:3:9.03:125,9,0	1/1:0,1:1:3.01:42,3,0	1/1:0,3:3:8.94:72,9,0
chr10	66914969	.	G	GT	15698.78	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=3.362;DP=652;FS=7.698;HRun=6;HaplotypeScore=86.1642;InbreedingCoeff=0.9989;MQ=81.94;MQ0=0;MQRankSum=-4.662;QD=29.96;ReadPosRankSum=1.559;VQSLOD=5.2714;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,37:42:97.19:1210,97,0	1/1:0,12:12:29.92:377,30,0	0/0:18,0:18:30.06:0,30,369	0/0:19,0:19:41.20:0,41,419	1/1:1,28:29:78.25:981,78,0	1/1:1,21:22:54.17:675,54,0	1/1:2,13:15:27.09:340,27,0	1/1:7,26:33:75.20:909,75,0	1/1:0,16:16:39.12:491,39,0	1/1:2,32:34:96.27:1169,96,0	1/1:3,26:29:75.15:918,75,0	1/1:1,16:17:36.12:453,36,0	0/0:27,0:27:81.18:0,81,824	1/1:4,21:26:57.18:714,57,0	1/1:3,19:22:48.15:604,48,0	1/1:2,19:21:48.15:604,48,0	1/1:3,23:26:57.18:717,57,0	1/1:2,12:14:27.08:340,27,0	1/1:4,14:18:39.01:457,39,0	1/1:1,32:33:96.26:1183,96,0	1/1:2,16:18:45.14:566,45,0	0/0:13,0:13:36.08:0,36,367	0/0:26,0:26:75.16:0,75,757	0/0:25,0:25:66.15:0,66,673	1/1:1,26:27:63.20:784,63,0	1/1:4,24:28:72.19:888,72,0	1/1:4,30:33:81.26:1017,81,0	1/1:0,8:8:24.08:302,24,0
chr10	66916518	.	AGAAATTCACCAG	A	17047.85	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=10.264;DP=288;FS=3.974;HRun=0;HaplotypeScore=118.4714;InbreedingCoeff=0.8875;MQ=80.71;MQ0=0;MQRankSum=-11.816;QD=83.57;ReadPosRankSum=5.542;VQSLOD=4.1811;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,9:9:21.07:798,21,0	1/1:0,7:7:21.07:798,21,0	0/0:19,0:19:51.18:0,51,2693	0/0:16,0:15:41.81:0,42,1902	1/1:2,14:16:30.10:1140,30,0	1/1:4,10:14:30.10:1140,30,0	1/1:0,3:3:9.03:342,9,0	1/1:3,16:19:45.14:1496,45,0	1/1:2,8:9:18.06:684,18,0	1/1:2,13:14:36.08:1188,36,0	1/1:0,6:6:18.06:684,18,0	1/1:2,9:11:21.07:798,21,0	0/0:18,0:18:51.18:0,51,3055	1/1:1,7:8:18.06:684,18,0	1/1:1,5:6:12.04:456,12,0	1/1:1,10:9:21.07:798,21,0	1/1:0,5:5:15.05:570,15,0	1/1:0,2:1:3.01:114,3,0	1/1:1,9:9:24.08:912,24,0	1/1:0,4:4:12.04:456,12,0	1/1:2,1:3:3.01:114,3,0	0/0:11,0:11:33.11:0,33,1782	0/0:9,0:9:24.08:0,24,1430	0/0:11,0:11:30.10:0,30,1776	1/1:0,12:12:30.10:1140,30,0	1/1:0,8:8:24.08:912,24,0	1/1:3,14:16:39.13:1482,39,0	1/1:1,7:8:9.03:342,9,0
chr10	66917680	.	ACAGTGCTG	A	79.29	PASS	AB=0.750;AC=5;AF=0.278;AN=18;BaseQRankSum=2.936;DP=254;FS=6.736;HRun=0;HaplotypeScore=50.8266;MQ=44.69;MQ0=58;MQRankSum=-2.954;QD=6.10;ReadPosRankSum=-1.787;VQSLOD=-0.4404;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:16,0:2:6.02:0,6,163	0/0:25,0:1:3.01:0,3,121	./.	./.	./.	./.	./.	0/1:4,2:3:70.80:75,0,71	./.	1/1:2,0:1:2.22:7,2,0	0/0:61,1:54:99:0,141,5428	./.	./.	./.	./.	./.	./.	./.	./.	0/0:17,0:16:33.11:0,33,1230	0/0:18,0:18:42.14:0,42,1772	0/0:41,0:41:90.25:0,90,3424	./.	1/1:3,2:1:3.01:81,3,0	./.	./.
chr10	66917755	.	GTGCTGCAA	G	67.40	PASS	AC=6;AF=0.300;AN=20;BaseQRankSum=2.352;DP=260;FS=11.831;HRun=0;HaplotypeScore=57.3480;InbreedingCoeff=0.5830;MQ=29.71;MQ0=78;MQRankSum=-2.387;QD=6.74;ReadPosRankSum=-1.545;VQSLOD=-0.1775;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:6:0:0,0,0	0/0:8,0:7:6.02:0,6,234	./.	./.	0/0:6,1:5:0:0,0,0	1/1:0,2:2:3.01:57,3,0	./.	1/1:0,1:1:3.01:83,3,0	./.	./.	./.	./.	0/0:54,0:43:62.68:0,63,1982	./.	./.	./.	./.	./.	./.	./.	1/1:4,3:4:3.28:16,3,0	0/0:33,0:30:33.10:0,33,1225	0/0:19,0:18:12.04:0,12,467	0/0:46,0:35:49.39:0,49,1307	./.	./.	./.	./.
chr10	66917803	.	TGTAGGC	T	87.72	PASS	AB=0.500;AC=7;AF=0.318;AN=22;BaseQRankSum=3.114;DP=285;FS=5.842;HRun=0;HaplotypeScore=59.7523;InbreedingCoeff=0.4667;MQ=20.65;MQ0=100;MQRankSum=2.500;QD=2.83;ReadPosRankSum=-0.745;VQSLOD=0.8643;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	./.	./.	0/1:0,2:2:0:0,0,0	0/0:3,0:3:6.02:0,6,165	1/1:4,5:3:5.96:52,6,0	./.	./.	1/1:3,6:6:3.01:32,3,0	0/0:49,0:36:13.59:0,14,541	1/1:2,9:9:5.99:95,6,0	0/0:1,7:6:3.01:0,3,36	0/0:2,2:2:3.01:0,3,42	./.	./.	./.	./.	0/0:6,0:4:4.26:0,4,69	0/0:35,0:21:0.47:0,0,1	./.	0/0:51,0:29:6:0,6,133	./.	./.	./.	./.
chr10	66917823	.	CACAGTGCT	C	774.84	PASS	AB=1.000;AC=17;AF=0.654;AN=26;BaseQRankSum=4.043;DP=323;FS=11.067;HRun=0;HaplotypeScore=57.1229;InbreedingCoeff=0.5362;MQ=22.22;MQ0=96;MQRankSum=-2.129;QD=7.60;ReadPosRankSum=2.657;VQSLOD=0.0947;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	./.	1/1:0,5:2:3.01:36,3,0	1/1:0,3:2:6.02:73,6,0	./.	1/1:4,8:6:9.03:156,9,0	./.	./.	1/1:2,15:12:15.05:309,15,0	0/0:57,0:44:27.10:0,27,748	1/1:2,10:10:6:138,6,0	1/1:0,11:9:5.80:72,6,0	1/1:2,8:5:3.01:62,3,0	1/1:1,1:2:3.01:36,3,0	./.	./.	./.	0/0:6,1:3:1.25:0,1,3	0/1:30,0:16:0.01:0,0,0	0/0:16,0:11:3.01:0,3,114	0/0:56,0:35:13.06:0,13,541	./.	./.	./.	./.
chr10	66918543	.	T	TCTTTC	22877.13	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=-12.994;DP=586;FS=3.795;HRun=0;HaplotypeScore=86.3701;InbreedingCoeff=0.9745;MQ=86.19;MQ0=0;MQRankSum=-5.276;QD=52.71;ReadPosRankSum=3.373;VQSLOD=4.6857;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,16:24:30.10:818,30,0	1/1:4,6:11:12.04:353,12,0	0/0:30,0:30:16.70:0,17,608	0/0:17,0:17:30.09:0,30,413	1/1:3,24:29:7.89:1419,8,0	1/1:6,15:21:42.14:1234,42,0	1/1:7,12:19:21.07:616,21,0	0/0:34,0:34:60.18:0,60,1062	1/1:2,16:18:36.12:1030,36,0	1/1:10,16:26:45.14:1208,45,0	1/1:4,19:24:48.16:1378,48,0	1/1:4,10:14:27.09:793,27,0	0/0:14,0:14:33.10:0,33,587	1/1:1,16:17:45.15:1322,45,0	1/1:7,16:23:42.14:1234,42,0	1/1:5,7:13:15.05:412,15,0	1/1:4,9:13:24.08:686,24,0	1/1:1,22:24:54.19:1587,54,0	1/1:8,10:19:36.10:944,36,0	1/1:4,21:27:63.96:1536,64,0	1/1:9,13:22:30.10:822,30,0	0/0:28,0:28:72.23:0,72,1302	0/0:13,0:13:33.11:0,33,640	0/0:15,0:15:36.12:0,36,689	1/1:3,13:16:33.11:969,33,0	1/1:3,22:26:69.22:1885,69,0	1/1:8,22:32:63.21:1836,63,0	1/1:7,9:16:27.09:793,27,0
chr10	66921367	.	CATT	C	23842.42	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=8.746;DP=658;FS=3.717;HRun=0;HaplotypeScore=103.4384;InbreedingCoeff=0.9997;MQ=84.55;MQ0=0;MQRankSum=-6.199;QD=45.16;ReadPosRankSum=4.123;VQSLOD=6.9204;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,22:22:48.16:791,48,0	1/1:0,12:12:33.11:562,33,0	0/0:23,0:23:66.07:0,66,1380	0/0:20,0:20:60.12:0,60,1128	1/1:0,28:28:84.28:1353,84,0	1/1:2,34:36:96.33:1623,96,0	1/1:0,16:16:45.15:767,45,0	1/1:0,33:33:99:1655,99,0	1/1:1,28:29:78.27:1330,78,0	1/1:0,30:30:90.30:1503,90,0	1/1:0,25:25:69.23:1145,69,0	1/1:0,19:19:57.20:972,57,0	0/0:33,1:34:48.17:0,48,2141	1/1:0,24:24:69.24:1162,69,0	1/1:1,22:23:54.18:907,54,0	1/1:1,26:27:69.24:1163,69,0	1/1:1,19:20:42.14:716,42,0	1/1:1,11:12:27.09:447,27,0	1/1:0,23:23:69.24:1164,69,0	1/1:0,34:34:96.32:1563,96,0	1/1:1,23:24:54.18:907,54,0	0/0:23,0:23:69.23:0,69,1528	0/0:18,0:18:54.19:0,54,1213	0/0:12,0:12:36.11:0,36,767	1/1:0,12:12:36.12:614,36,0	1/1:3,28:31:84.29:1406,84,0	1/1:0,32:32:84.29:1428,84,0	1/1:0,16:16:39.13:665,39,0
chr10	66921597	.	TCA	T	6239.04	PASS	AB=0.650;AC=25;AF=0.446;AN=56;BaseQRankSum=17.556;DP=584;FS=13.931;HRun=0;HaplotypeScore=140.0303;InbreedingCoeff=-0.3697;MQ=69.20;MQ0=4;MQRankSum=-2.347;QD=14.05;ReadPosRankSum=9.570;VQSLOD=3.0145;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:8,11:19:74.35:252,0,74	0/1:2,3:5:32.86:60,0,33	0/0:23,0:19:54.07:0,54,814	0/0:21,0:18:48.12:0,48,740	0/1:22,9:31:99:253,0,340	1/1:3,11:14:16.99:288,17,0	0/1:3,8:11:9.30:144,0,9	0/1:20,11:30:99:274,0,177	0/1:6,8:14:31.22:211,0,31	0/1:14,15:29:99:443,0,134	1/1:2,15:17:29.71:347,30,0	0/1:14,15:29:99:333,0,152	0/0:33,0:33:99:0,99,1852	0/1:4,8:12:51.89:162,0,52	0/1:4,12:16:21.87:281,0,22	0/1:5,21:26:19.65:489,0,20	0/1:9,13:22:74.49:290,0,74	0/1:6,8:14:9.88:228,0,10	0/1:13,8:19:99:199,0,145	0/1:11,19:30:11.65:557,0,12	0/1:5,4:9:60.82:61,0,92	0/0:20,0:20:60.21:0,60,1185	0/0:22,0:22:66.23:0,66,1288	0/0:20,1:21:39.16:0,39,1072	1/1:10,21:31:5.45:572,5,0	0/1:5,14:19:31.84:297,0,32	0/1:13,15:28:88.44:373,0,88	0/1:12,4:16:99:126,0,122
chr10	66921600	.	TTC	T	5834.65	PASS	AB=0.647;AC=24;AF=0.429;AN=56;BaseQRankSum=18.482;DP=578;FS=16.870;HRun=0;HaplotypeScore=140.0457;InbreedingCoeff=-0.4417;MQ=69.92;MQ0=4;MQRankSum=-1.293;QD=13.11;ReadPosRankSum=9.774;VQSLOD=2.4974;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:10,11:21:69.62:255,0,70	0/1:2,3:5:31.91:60,0,32	0/0:19,0:16:45.15:0,45,730	0/0:20,0:17:45.14:0,45,731	0/1:22,9:31:99:225,0,355	0/1:4,11:15:3.97:267,0,4	0/1:3,8:11:8.35:142,0,8	0/1:15,11:25:99:181,0,184	0/1:6,8:14:34.06:187,0,34	0/1:15,15:30:99:439,0,147	1/1:3,15:18:9.74:323,10,0	0/1:13,15:29:99:333,0,147	0/0:32,0:32:96.33:0,96,1816	0/1:4,8:12:49.98:162,0,50	0/1:5,12:17:42.25:253,0,42	0/1:5,21:26:38.31:462,0,38	0/1:7,13:20:76.37:264,0,76	0/1:6,8:14:32.14:224,0,32	0/1:13,8:19:99:199,0,140	0/1:11,19:30:14.58:531,0,15	0/1:7,4:11:58.04:58,0,106	0/0:20,0:20:60.21:0,60,1189	0/0:21,0:21:63.22:0,63,1222	0/0:20,1:21:39.21:0,39,1088	1/1:10,21:31:7.05:570,7,0	0/1:5,14:19:29.88:297,0,30	0/1:12,15:27:91.80:359,0,92	0/1:13,4:17:44.41:44,0,213
chr10	66922463	.	A	AC	15277.01	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=8.040;DP=553;FS=0.872;HRun=4;HaplotypeScore=87.0353;InbreedingCoeff=0.9978;MQ=81.92;MQ0=0;MQRankSum=-6.027;QD=34.72;ReadPosRankSum=3.321;VQSLOD=5.1849;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,37:40:96.32:1308,96,0	1/1:0,6:6:18.06:246,18,0	0/0:23,0:22:56.50:0,56,664	0/0:28,0:25:26.13:0,26,522	1/1:1,20:21:51.17:697,51,0	1/1:2,17:19:48.16:656,48,0	1/1:1,18:19:51.17:698,51,0	1/1:1,20:21:51.17:696,51,0	1/1:0,18:18:48.16:656,48,0	1/1:2,10:12:30.10:410,30,0	1/1:1,18:19:45.15:609,45,0	1/1:0,25:25:63.15:861,63,0	0/0:12,0:12:33.08:0,33,364	1/1:1,14:15:36.11:478,36,0	1/1:2,23:25:60.20:821,60,0	1/1:1,13:14:35.80:492,36,0	1/1:2,29:31:81.27:1108,81,0	1/1:2,16:18:51.17:697,51,0	1/1:0,15:15:39.13:534,39,0	1/1:3,17:20:51.15:677,51,0	1/1:0,37:37:99:1394,102,0	0/0:16,0:16:42.12:0,42,476	0/0:14,0:14:39.10:0,39,432	0/0:20,0:20:57.16:0,57,646	1/1:3,18:20:45.15:615,45,0	1/1:1,11:12:33.09:434,33,0	1/1:0,17:17:42.14:574,42,0	1/1:0,15:15:45.15:615,45,0
chr10	66922751	.	AT	A	15556.57	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=8.817;DP=673;FS=0.000;HRun=6;HaplotypeScore=70.1842;InbreedingCoeff=0.9928;MQ=60.21;MQ0=0;MQRankSum=-0.050;QD=27.83;ReadPosRankSum=0.978;VQSLOD=5.2674;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,25:25:69.09:741,69,0	1/1:3,13:16:39.09:419,39,0	0/0:14,0:10:21.05:0,21,250	0/0:8,0:5:12.04:0,12,149	1/1:4,32:36:90.22:967,90,0	1/1:0,27:27:75.19:806,75,0	1/1:2,18:20:51.13:548,51,0	1/1:4,19:23:54.11:571,54,0	1/1:7,26:33:78.19:838,78,0	1/1:1,30:31:87.22:934,87,0	1/1:1,23:24:60.15:645,60,0	1/1:3,27:30:78.20:838,78,0	0/0:27,0:27:75.23:0,75,970	1/1:3,17:20:51.13:548,51,0	1/1:2,26:28:72.18:774,72,0	1/1:0,28:28:78.20:838,78,0	1/1:4,15:19:45.11:483,45,0	1/1:2,19:21:55.38:584,55,0	1/1:3,14:17:42.11:452,42,0	1/1:1,36:37:99:1129,105,0	1/1:3,27:30:66.16:709,66,0	0/0:28,0:28:81.25:0,81,1051	0/0:16,0:16:45.15:0,45,592	0/0:21,0:21:51.17:0,51,671	1/1:1,21:22:63.16:677,63,0	1/1:0,24:24:72.16:764,72,0	1/1:2,35:37:90.23:967,90,0	1/1:1,10:11:30.07:322,30,0
chr10	66924650	.	TAC	T	269.67	PASS	AB=0.956;AC=8;AF=0.143;AN=56;BaseQRankSum=-2.238;DP=618;FS=0.000;HRun=0;HaplotypeScore=130.9398;InbreedingCoeff=0.3894;MQ=61.05;MQ0=10;MQRankSum=2.556;QD=2.07;ReadPosRankSum=2.348;VQSLOD=1.9514;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:15,14:29:14.58:166,15,0	1/1:3,5:8:15:150,15,0	0/0:24,0:16:0.47:0,0,1	0/1:29,0:17:0:0,0,0	0/0:19,0:19:1.44:0,1,244	0/0:4,0:22:6:0,6,52	0/0:12,0:28:9.31:0,9,54	0/0:32,0:32:30.85:0,31,203	0/0:20,0:22:8.35:0,8,72	0/0:8,0:17:12:0,12,136	0/0:20,0:20:8.79:0,9,92	0/0:10,0:30:20.59:0,21,165	0/1:17,1:18:0.19:0,0,375	0/0:11,0:26:2.71:0,3,12	0/0:11,0:24:14.81:0,15,142	0/0:10,0:24:12.17:0,12,91	0/1:15,0:17:18.49:18,0,57	0/0:11,0:11:9.82:0,10,67	0/0:9,0:13:17.56:0,18,161	0/0:10,0:27:15.54:0,16,87	0/0:26,0:25:15.99:0,16,226	0/1:23,4:28:61.18:61,0,343	0/0:19,0:19:24.05:0,24,315	0/0:18,0:18:21.04:0,21,291	0/0:6,0:21:13.04:0,13,80	0/0:10,0:30:35.51:0,36,272	0/0:26,0:27:30.73:0,31,275	0/0:7,0:5:2.60:0,3,10
chr10	66925100	.	AGTGTGT	A	1976.96	PASS	AB=0.846;AC=31;AF=0.646;AN=48;BaseQRankSum=3.551;DP=522;FS=26.995;HRun=0;HaplotypeScore=117.3954;InbreedingCoeff=0.3882;MQ=65.91;MQ0=19;MQRankSum=-5.306;QD=5.99;ReadPosRankSum=-1.089;VQSLOD=0.6487;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:20,0:27:37.39:54,0,37	0/0:2,0:2:3:0,3,25	./.	./.	1/1:14,0:22:9.03:124,9,0	1/1:14,5:19:12.04:241,12,0	1/1:11,4:15:5.55:120,6,0	0/0:20,0:20:3.01:0,3,61	1/1:10,5:14:6.02:121,6,0	./.	1/1:14,3:16:6.02:97,6,0	1/1:11,3:14:6.02:121,6,0	0/1:15,1:19:37.17:37,0,257	1/1:20,1:20:3.01:60,3,0	1/1:12,3:17:12.04:204,12,0	1/1:16,4:21:12.04:223,12,0	0/1:27,2:28:60.94:110,0,61	0/0:14,0:14:3.48:0,3,36	./.	1/1:21,3:23:6.02:98,6,0	1/1:31,0:28:3.01:52,3,0	0/0:14,0:15:18.02:0,18,305	0/0:12,0:16:11.81:0,12,166	0/0:8,0:12:18.04:0,18,276	1/1:6,5:11:6.49:122,6,0	0/0:23,0:23:0.89:0,1,2	1/1:11,2:14:14.08:228,14,0	1/1:7,5:10:6.02:121,6,0
chr10	66925405	.	AT	A	544.14	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.086;DP=463;FS=32.176;HRun=8;HaplotypeScore=49.6457;InbreedingCoeff=0.9738;MQ=79.62;MQ0=1;MQRankSum=0.108;QD=16.49;ReadPosRankSum=1.385;VQSLOD=1.8364;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,23:23:51.08:492,51,0	1/1:2,8:10:18.02:171,18,0	0/0:19,0:16:12.62:0,13,227	0/0:24,0:16:38.44:0,38,414	0/0:13,0:13:36.11:0,36,430	0/0:21,0:21:57.16:0,57,676	0/0:8,0:8:24.07:0,24,290	0/0:33,0:33:84.22:0,84,982	0/0:12,0:12:33.10:0,33,399	0/0:12,0:12:36.11:0,36,435	0/0:14,0:14:42.13:0,42,507	0/0:17,0:17:51.16:0,51,616	0/0:18,0:18:54.16:0,54,649	0/0:15,0:15:42.11:0,42,495	0/0:18,0:18:48.15:0,48,580	0/0:16,0:16:45.14:0,45,543	0/0:21,0:21:57.17:0,57,687	0/0:19,0:19:46.38:0,46,545	0/0:15,0:15:33.10:0,33,398	0/0:16,0:16:45.14:0,45,543	0/0:10,0:10:30.09:0,30,362	0/0:11,0:11:30.09:0,30,362	0/0:7,0:7:18.06:0,18,217	0/0:7,0:7:21.05:0,21,243	0/0:19,0:19:45.10:0,45,527	0/0:28,0:28:75.22:0,75,896	0/0:24,0:24:66.20:0,66,797	0/0:13,0:13:32.61:0,33,386
chr10	66926167	.	T	TATG	27587.04	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-15.086;DP=685;FS=2.346;HRun=0;HaplotypeScore=85.7004;InbreedingCoeff=0.9769;MQ=90.90;MQ0=0;MQRankSum=-10.107;QD=54.63;ReadPosRankSum=2.348;VQSLOD=7.2049;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,29:31:60.17:1328,60,0	1/1:0,7:7:18.06:408,18,0	0/0:29,0:29:78.27:0,78,1299	0/0:35,0:35:93.25:0,93,1426	1/1:1,23:25:57.19:1227,57,0	1/1:1,11:12:24.08:543,24,0	1/1:2,24:26:48.16:1085,48,0	1/1:3,34:38:99:2243,108,0	1/1:2,16:19:45.15:1015,45,0	1/1:0,26:28:81.22:1607,81,0	1/1:1,12:13:30.10:647,30,0	1/1:5,26:31:75.21:1618,75,0	0/0:41,0:41:99:0,123,1998	1/1:3,28:31:81.28:1831,81,0	1/1:0,25:25:69.24:1560,69,0	1/1:3,17:21:54.19:1222,54,0	1/1:3,26:30:66.23:1480,66,0	1/1:1,20:21:57.20:1282,57,0	1/1:3,9:13:39.08:717,39,0	1/1:0,30:30:75.26:1623,75,0	1/1:3,27:30:66.23:1421,66,0	0/0:25,0:25:72.25:0,72,1199	0/0:23,0:23:66.23:0,66,1093	0/0:27,0:26:72.25:0,72,1199	1/1:2,15:17:48.16:1045,48,0	1/1:0,28:28:84.29:1853,84,0	1/1:1,26:27:75.26:1697,75,0	1/1:0,2:2:6.02:136,6,0
chr10	66928272	.	CT	C	9896.57	PASS	AB=0.942;AC=46;AF=0.821;AN=56;BaseQRankSum=7.398;DP=642;FS=13.722;HRun=11;HaplotypeScore=68.9807;InbreedingCoeff=0.7542;MQ=77.59;MQ0=0;MQRankSum=-0.510;QD=17.90;ReadPosRankSum=1.520;VQSLOD=4.9179;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,20:25:46.56:412,47,0	1/1:2,7:9:17.97:148,18,0	0/1:12,1:12:21.28:21,0,104	0/1:20,1:19:10.64:11,0,201	1/1:2,30:32:80.86:665,81,0	1/1:5,25:30:74.90:616,75,0	1/1:3,17:21:49.98:400,50,0	1/1:3,31:34:92.74:750,93,0	1/1:2,20:22:50.93:417,51,0	1/1:4,30:34:89.41:717,89,0	1/1:6,15:21:41.78:330,42,0	1/1:5,21:26:27.94:436,28,0	0/0:22,1:23:38.48:0,38,594	1/1:2,13:15:35.95:295,36,0	1/1:1,21:22:44.93:366,45,0	1/1:3,25:28:68.92:567,69,0	1/1:3,16:20:49.98:400,50,0	1/1:1,9:10:20.97:172,21,0	1/1:9,20:29:28.07:436,28,0	1/1:5,31:37:94.48:750,94,0	1/1:3,16:19:41.84:336,42,0	0/0:27,0:28:81.01:0,81,826	0/0:25,0:25:72.16:0,72,754	0/0:12,0:13:27.02:0,27,316	1/1:4,22:26:56.92:468,57,0	1/1:3,28:31:80.85:661,81,0	1/1:5,19:25:55.97:449,56,0	1/1:0,3:3:8.99:74,9,0
chr10	66928533	.	TAATTTCATG	T	1749.90	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=8.165;DP=634;FS=2.514;HRun=0;HaplotypeScore=173.8907;InbreedingCoeff=0.5932;MQ=85.03;MQ0=0;MQRankSum=-4.557;QD=35.71;ReadPosRankSum=-3.786;VQSLOD=2.7636;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:66.23:0,66,3185	0/0:11,0:11:30.10:0,30,1489	0/0:18,0:18:54.13:0,54,1620	0/1:23,0:23:17.64:18,0,1367	0/0:33,0:33:99:0,99,4782	0/0:29,0:29:81.26:0,81,3691	0/0:22,0:22:66.23:0,66,2832	1/1:0,26:26:78.11:1837,78,0	0/0:19,0:19:57.20:0,57,2707	0/0:35,0:35:99:0,105,4516	0/0:18,0:18:51.16:0,51,2278	0/0:22,0:22:66.23:0,66,3149	0/0:31,0:31:93.31:0,93,4329	0/0:24,0:24:72.25:0,72,3364	0/0:22,0:22:66.23:0,66,3120	0/0:26,0:26:78.27:0,78,3841	0/0:18,0:18:54.19:0,54,2546	0/0:4,0:4:12.04:0,12,595	0/0:15,0:15:45.15:0,45,2044	0/0:31,0:31:90.30:0,90,4023	0/0:22,0:22:66.23:0,66,3037	0/0:24,0:24:72.25:0,72,3284	0/0:27,0:27:81.27:0,81,3574	0/0:26,0:26:78.22:0,78,3655	0/0:27,0:27:81.26:0,81,3555	0/0:27,0:27:81.28:0,81,3820	0/0:29,0:28:84.29:0,84,3934	0/0:2,0:2:6.02:0,6,298
chr10	66929395	.	A	AG	20453.48	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-10.821;DP=613;FS=0.000;HRun=1;HaplotypeScore=59.5523;InbreedingCoeff=0.9955;MQ=93.32;MQ0=0;MQRankSum=-6.680;QD=43.15;ReadPosRankSum=2.444;VQSLOD=5.0221;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,24:25:72.25:1150,72,0	1/1:0,8:8:24.08:383,24,0	0/0:31,0:31:85.71:0,86,1207	0/0:25,0:25:61.17:0,61,902	1/1:1,21:22:48.16:741,48,0	1/1:0,37:37:99:1617,102,0	1/1:2,22:24:57.19:911,57,0	1/1:2,31:34:96.28:1443,96,0	1/1:0,20:20:51.17:815,51,0	1/1:2,19:21:57.19:909,57,0	1/1:1,25:26:66.23:1055,66,0	1/1:0,19:19:54.18:863,54,0	0/0:23,0:23:66.22:0,66,922	1/1:0,15:15:45.15:719,45,0	1/1:0,27:27:72.25:1151,72,0	1/1:1,21:22:57.19:911,57,0	1/1:0,13:13:39.13:623,39,0	1/1:1,6:7:15.05:239,15,0	1/1:4,24:28:81.23:1248,81,0	1/1:1,21:22:63.21:1006,63,0	1/1:1,22:23:63.21:1007,63,0	0/0:18,0:18:54.18:0,54,754	0/0:18,0:18:48.16:0,48,668	0/0:24,0:24:72.24:0,72,1001	1/1:0,15:15:39.13:623,39,0	1/1:1,27:28:81.26:1263,81,0	1/1:0,31:30:90.31:1438,90,0	1/1:0,7:7:21.07:335,21,0
chr10	66929784	.	A	ATTTGTTTG	29748.36	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-7.635;DP=608;FS=0.512;HRun=0;HaplotypeScore=128.0110;InbreedingCoeff=0.9642;MQ=60.74;MQ0=0;MQRankSum=-11.080;QD=58.79;ReadPosRankSum=-0.124;VQSLOD=4.8336;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,7:18:18.06:686,18,0	1/1:3,6:10:9.03:377,9,0	0/0:11,0:10:14.84:0,15,314	0/0:26,0:23:20.90:0,21,435	1/1:9,2:30:42.14:1210,42,0	1/1:6,21:28:51.17:2047,51,0	1/1:4,9:13:21.07:879,21,0	1/1:18,17:36:60.17:1912,60,0	1/1:4,17:24:45.15:1884,45,0	1/1:9,20:30:54.18:1981,54,0	1/1:8,17:27:39.13:1473,39,0	1/1:13,12:27:36.12:1496,36,0	0/0:13,0:13:27.09:0,27,666	1/1:12,12:24:39.13:1457,39,0	1/1:12,20:35:48.16:2008,48,0	1/1:6,9:15:24.08:1004,24,0	1/1:3,9:12:18.06:752,18,0	1/1:9,5:14:16.51:524,17,0	1/1:14,7:22:27.07:871,27,0	1/1:7,16:23:45.15:1639,45,0	1/1:15,0:15:23.77:481,24,0	0/0:22,0:22:51.18:0,51,1282	0/0:21,0:21:51.16:0,51,1267	0/0:9,0:9:21.07:0,21,545	1/1:8,15:23:48.16:1834,48,0	1/1:9,20:30:60.13:2271,60,0	1/1:13,25:39:66.20:2672,66,0	1/1:9,2:11:9.03:290,9,0
chr10	66930997	.	C	CTT	12443.18	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-7.363;DP=506;FS=5.767;HRun=8;HaplotypeScore=66.0539;InbreedingCoeff=0.9482;MQ=74.74;MQ0=1;MQRankSum=-2.576;QD=30.57;ReadPosRankSum=0.379;VQSLOD=4.7581;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,0:25:57.39:197,57,0	1/1:0,0:4:7.49:26,7,0	0/0:17,0:16:31.33:0,31,297	0/0:13,0:13:17.44:0,17,219	1/1:6,1:32:62.84:493,63,0	1/1:1,17:18:42.14:667,42,0	1/1:3,9:12:28.34:431,28,0	1/1:6,18:25:57.14:813,57,0	1/1:2,18:23:57.19:885,57,0	1/1:1,19:20:57.19:901,57,0	1/1:2,19:21:54.14:827,54,0	1/1:6,10:16:33.10:503,33,0	0/0:23,0:23:66.16:0,66,725	1/1:1,13:15:29.59:437,30,0	1/1:2,21:24:57.15:877,57,0	1/1:2,13:15:33.11:524,33,0	1/1:1,19:20:39.13:618,39,0	1/1:2,4:7:8.52:104,9,0	1/1:4,14:19:44.63:648,45,0	1/1:1,18:21:53.90:665,54,0	1/1:5,9:14:24.08:375,24,0	0/0:15,0:15:42.10:0,42,468	0/0:20,0:20:54.13:0,54,592	0/0:11,0:11:29.28:0,29,333	1/1:2,20:23:42.14:667,42,0	1/1:0,14:13:42.13:642,42,0	1/1:2,26:31:68.72:1045,69,0	1/1:3,4:7:6.02:95,6,0
chr10	66932155	.	CTGTGTG	C	12157.82	PASS	AB=0.652;AC=40;AF=0.714;AN=56;BaseQRankSum=9.781;DP=544;FS=10.405;HRun=0;HaplotypeScore=170.2066;InbreedingCoeff=0.8140;MQ=55.02;MQ0=12;MQRankSum=-9.780;QD=32.95;ReadPosRankSum=2.520;VQSLOD=3.9202;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:13,0:22:1.01:1,0,51	1/1:1,0:7:5.32:10,5,0	0/0:46,0:18:30.10:0,30,883	0/0:46,0:19:20.62:0,21,553	0/1:7,1:22:7.99:8,0,27	1/1:9,12:21:45.14:909,45,0	1/1:6,6:12:24.06:455,24,0	1/1:19,16:35:24.54:956,25,0	1/1:5,14:19:48.15:969,48,0	1/1:7,10:17:33.11:711,33,0	1/1:11,7:18:30.57:588,31,0	1/1:12,3:15:18.06:353,18,0	0/0:22,0:23:57.20:0,57,1757	1/1:7,10:17:42.14:818,42,0	1/1:6,9:15:33.11:661,33,0	1/1:4,8:12:33.11:605,33,0	1/1:4,3:7:8.99:149,9,0	0/0:5,0:5:2.99:0,3,24	1/1:10,10:21:39.13:794,39,0	1/1:6,10:16:33.11:692,33,0	1/1:10,6:16:18.06:336,18,0	0/0:15,0:15:33.10:0,33,1031	0/0:24,0:24:57.20:0,57,1877	0/0:14,0:16:45.15:0,45,1337	1/1:6,11:17:42.14:878,42,0	1/1:7,10:17:36.11:702,36,0	1/1:12,19:31:63.20:1304,63,0	1/1:8,4:12:12.04:258,12,0
chr10	66932159	.	G	GTGTGTGTGTGTGAAAAC	34661.46	PASS	AB=1.000;AC=41;AF=0.732;AN=56;BaseQRankSum=9.354;DP=697;FS=5.014;HRun=0;HaplotypeScore=353.7676;InbreedingCoeff=0.7252;MQ=49.79;MQ0=17;MQRankSum=-11.984;QD=70.02;ReadPosRankSum=1.097;VQSLOD=3.8165;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:23:41.67:305,0,42	1/1:7,0:7:15.94:615,16,0	0/0:60,0:19:31.57:0,32,935	0/0:59,0:19:30.24:0,30,517	0/1:23,0:23:12.92:259,0,13	1/1:26,0:26:66.21:1776,66,0	1/1:17,0:17:48.13:1009,48,0	1/1:31,0:32:48.16:1152,48,0	1/1:27,1:28:75.24:2355,75,0	1/1:24,0:24:63.22:2605,63,0	1/1:26,3:29:65.80:2340,66,0	1/1:25,0:25:54.18:1622,54,0	0/0:22,0:22:66.23:0,66,2407	1/1:20,3:23:65.71:2044,66,0	1/1:22,2:24:54.16:1716,54,0	1/1:21,3:24:69.24:2575,69,0	1/1:14,0:14:23.58:809,24,0	0/1:8,0:8:80.97:516,0,81	1/1:26,0:26:51.16:1907,51,0	1/1:22,1:23:57.20:2009,57,0	1/1:18,1:19:14.38:474,14,0	0/0:17,0:17:42.13:0,42,1319	0/0:23,0:23:60.21:0,60,1997	0/0:21,0:21:57.20:0,57,1966	1/1:24,2:26:72.25:2548,72,0	1/1:22,0:22:54.17:1846,54,0	1/1:38,1:39:99:2975,102,0	1/1:13,0:13:27.09:1204,27,0
chr10	66932182	.	CTGTG	C	10089.36	PASS	AB=0.676;AC=27;AF=0.482;AN=56;BaseQRankSum=-2.943;DP=851;FS=14.683;HRun=0;HaplotypeScore=264.5749;InbreedingCoeff=-0.2515;MQ=35.70;MQ0=33;MQRankSum=-5.491;QD=18.58;ReadPosRankSum=-3.543;VQSLOD=2.7309;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:12,11:24:62.96:229,0,63	0/1:6,7:13:30.87:364,0,31	0/0:112,0:21:32.04:0,32,532	0/0:115,0:33:58.97:0,59,812	0/1:17,15:32:58.28:398,0,58	0/1:14,9:23:85.40:343,0,85	1/1:6,11:17:3.41:460,3,0	0/1:44,7:51:99:494,0,236	0/1:15,21:36:63.44:780,0,63	0/1:13,15:28:99:721,0,347	1/1:7,18:27:22.02:553,22,0	1/1:5,17:22:27.57:689,28,0	0/0:23,0:23:63.20:0,63,1488	0/1:11,16:27:20.59:582,0,21	0/1:10,17:27:31.88:569,0,32	1/1:8,17:25:20.31:822,20,0	1/1:5,9:14:7.06:304,7,0	0/1:3,6:9:34.89:250,0,35	0/1:16,10:24:99:458,0,275	0/1:11,12:24:59.80:381,0,60	0/1:13,9:22:18.69:93,0,19	0/0:16,0:16:43.01:0,43,957	0/0:17,0:21:52.85:0,53,974	0/0:21,0:21:57.18:0,57,1314	0/1:14,12:27:99:409,0,116	0/1:12,12:24:99:521,0,249	0/1:21,15:36:99:488,0,246	0/1:4,5:9:99:179,0,132
chr10	66932186	.	G	GTGTGTGTGTGTGTAAAC	20991.02	PASS	AB=1.000;AC=43;AF=0.768;AN=56;BaseQRankSum=2.445;DP=868;FS=15.499;HRun=0;HaplotypeScore=404.3294;InbreedingCoeff=0.8497;MQ=36.69;MQ0=32;MQRankSum=-10.800;QD=37.55;ReadPosRankSum=-1.170;VQSLOD=2.3030;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:24,1:25:32.10:831,32,0	1/1:9,4:13:33.11:1228,33,0	0/0:113,0:21:35.36:0,35,647	0/0:115,0:33:45.42:0,45,876	1/1:32,0:33:56.30:977,56,0	1/1:22,0:22:29.24:510,29,0	1/1:15,0:15:33.38:596,33,0	1/1:51,0:51:99:2959,110,0	1/1:37,0:37:56.24:1132,56,0	1/1:30,0:30:29.51:1219,30,0	1/1:29,0:29:40.99:1058,41,0	1/1:24,0:24:50.84:853,51,0	0/0:23,0:23:66.22:0,66,2471	1/1:27,0:27:38.26:1166,38,0	1/1:29,0:29:30.11:1004,30,0	1/1:25,0:25:56.72:1420,57,0	1/1:14,0:14:14.77:654,15,0	0/1:9,0:9:95.53:263,0,96	1/1:26,0:23:57.16:1192,57,0	1/1:26,0:26:37.98:605,38,0	1/1:21,0:21:0.36:136,0,0	0/0:16,0:16:45.15:0,45,1676	0/0:19,0:19:51.18:0,51,1977	0/0:20,0:20:57.20:0,57,2289	1/1:27,0:27:45.73:959,46,0	1/1:25,0:25:39.82:842,40,0	1/1:39,0:39:15.94:940,16,0	1/1:12,0:12:30.10:448,30,0
chr10	66932201	.	T	TAAA	3708.64	PASS	AB=0.861;AC=18;AF=0.321;AN=56;BaseQRankSum=7.759;DP=820;FS=38.556;HRun=0;HaplotypeScore=251.1786;InbreedingCoeff=-0.4777;MQ=45.37;MQ0=22;MQRankSum=-7.133;QD=8.35;ReadPosRankSum=-3.164;VQSLOD=1.6148;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:36.45:0,36,452	0/0:12,0:12:25.20:0,25,296	0/0:103,0:34:93.31:0,93,1554	0/0:117,0:40:92.83:0,93,1438	0/1:28,0:28:32.69:33,0,324	0/1:13,7:21:99:340,0,341	0/1:16,2:18:68.46:68,0,529	0/1:40,0:40:92.81:93,0,1277	0/1:25,7:33:99:287,0,635	0/1:22,7:30:99:465,0,786	0/1:26,2:29:75.64:76,0,505	0/0:26,2:28:4.34:0,4,702	0/0:22,0:22:63.20:0,63,1133	0/1:19,2:22:99:165,0,352	0/1:24,5:29:99:198,0,579	0/1:19,2:22:99:141,0,511	0/1:14,1:15:6.87:7,0,322	0/0:10,0:10:27.04:0,27,324	0/1:18,4:21:99:375,0,383	0/1:18,6:24:99:261,0,466	0/1:16,1:17:33.54:34,0,206	0/0:15,0:15:45.11:0,45,774	0/0:22,0:22:63.21:0,63,1063	0/0:24,0:24:66.23:0,66,1221	0/1:21,5:27:99:318,0,468	0/1:16,4:21:99:282,0,522	0/1:26,5:31:99:322,0,775	0/1:10,4:14:99:246,0,369
chr10	66932680	.	CT	C	7726.82	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=6.584;DP=435;FS=4.006;HRun=10;HaplotypeScore=45.9190;InbreedingCoeff=0.9742;MQ=68.14;MQ0=0;MQRankSum=-2.486;QD=21.46;ReadPosRankSum=1.399;VQSLOD=5.7904;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,19:19:56.99:495,57,0	1/1:1,4:5:12:104,12,0	0/0:6,0:4:9.02:0,9,97	0/0:9,0:7:15.04:0,15,160	1/1:1,15:16:38.94:332,39,0	1/1:2,15:17:38.99:339,39,0	1/1:2,9:11:26.99:234,27,0	1/1:5,31:36:92.94:804,93,0	1/1:4,12:16:23.99:208,24,0	1/1:3,18:21:53.98:466,54,0	1/1:0,16:16:41.82:352,42,0	1/1:3,14:17:35.99:313,36,0	0/0:13,0:13:36.10:0,36,398	1/1:2,11:13:26.99:234,27,0	1/1:1,11:12:32.98:287,33,0	1/1:1,9:10:23.99:208,24,0	1/1:1,17:18:50.99:443,51,0	1/1:1,7:8:20.99:182,21,0	1/1:5,14:19:41.97:362,42,0	1/1:0,21:21:59.95:514,60,0	1/1:2,9:11:20.99:182,21,0	0/0:9,0:10:23.90:0,24,246	0/0:24,0:24:60.15:0,60,656	0/0:13,0:13:36.09:0,36,390	1/1:1,24:25:62.98:547,63,0	1/1:2,16:18:47.99:417,48,0	1/1:0,24:24:59.99:521,60,0	1/1:0,7:7:21:182,21,0
chr10	66934762	.	CTT	C	6824.77	PASS	AC=44;AF=0.815;AN=54;BaseQRankSum=4.993;DP=371;FS=3.017;HRun=11;HaplotypeScore=93.2990;InbreedingCoeff=0.8473;MQ=62.12;MQ0=0;MQRankSum=-3.002;QD=20.01;ReadPosRankSum=1.902;VQSLOD=4.4476;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,0:18:42.52:186,43,0	1/1:1,0:9:21.76:91,22,0	0/0:4,0:4:12.03:0,12,158	0/0:6,0:6:2.92:0,3,17	1/1:2,0:24:58.08:227,58,0	1/1:2,21:23:60.14:638,60,0	1/1:1,6:7:18.04:192,18,0	1/1:5,1:38:73.05:323,73,0	1/1:1,6:7:15.04:160,15,0	1/1:3,13:16:39.08:415,39,0	1/1:5,24:29:69.09:721,69,0	1/1:2,1:3:3:32,3,0	0/0:8,0:8:21.07:0,21,323	1/1:1,3:4:9.02:96,9,0	1/1:2,8:10:18.04:191,18,0	1/1:0,10:10:30.08:319,30,0	1/1:1,17:18:36.08:383,36,0	1/1:4,10:13:9.56:239,10,0	1/1:2,12:13:33.05:341,33,0	1/1:5,10:15:30.06:319,30,0	1/1:0,8:8:20.97:209,21,0	./.	0/0:8,0:8:18.06:0,18,277	0/0:3,0:3:6.02:0,6,92	1/1:7,21:27:57.97:595,58,0	1/1:4,12:16:36.07:382,36,0	1/1:2,18:20:49:512,49,0	1/1:0,10:10:24.06:255,24,0
chr10	66936389	.	TCTCACA	T	2644.87	PASS	AB=1.000;AC=26;AF=0.481;AN=54;BaseQRankSum=-3.631;DP=303;FS=10.732;HRun=0;HaplotypeScore=80.8473;InbreedingCoeff=-0.0988;MQ=44.79;MQ0=27;MQRankSum=4.205;QD=11.45;ReadPosRankSum=-1.044;VQSLOD=1.1534;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:13:20.82:186,21,0	1/1:3,0:3:5.99:52,6,0	./.	0/0:1,0:1:0.89:0,1,2	0/1:18,0:18:17.18:17,0,20	0/1:20,0:20:87.54:260,0,88	0/1:13,0:12:12.55:162,0,13	1/1:14,0:13:5.92:59,6,0	1/1:3,7:10:2.48:71,2,0	0/1:11,0:10:84.22:84,0,200	1/1:9,0:8:2.59:35,3,0	0/0:5,0:4:3:0,3,26	0/0:10,0:9:12.99:0,13,349	0/1:10,0:10:52.82:131,0,53	0/1:13,0:13:46.65:165,0,47	0/1:12,0:12:63.14:161,0,63	0/1:14,0:11:15.52:273,0,16	0/1:9,0:8:49.51:50,0,106	0/1:7,0:7:29.04:156,0,29	1/1:13,0:13:17.69:265,18,0	0/0:7,0:4:2.94:0,3,35	0/0:13,0:11:2.90:0,3,157	0/0:18,0:15:14.50:0,15,281	0/0:14,0:12:14.96:0,15,255	1/1:16,0:14:24.06:348,24,0	0/1:20,0:17:63.52:267,0,64	0/1:5,0:4:65.30:66,0,65	0/0:4,0:2:3.01:0,3,37
chr10	66936391	.	TCACACACACA	T	453.60	PASS	AB=0.854;AC=8;AF=0.160;AN=50;BaseQRankSum=0.331;DP=303;FS=8.434;HRun=0;HaplotypeScore=101.3990;InbreedingCoeff=0.3428;MQ=44.64;MQ0=30;MQRankSum=2.245;QD=7.82;ReadPosRankSum=-0.347;VQSLOD=1.3621;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:13:18.06:331,18,0	1/1:2,0:2:3.01:52,3,0	./.	./.	1/1:7,9:18:0.47:0,0,0	0/0:20,0:20:28.22:0,28,351	0/0:14,0:13:18.52:0,19,200	0/1:12,1:13:7.70:166,0,8	0/0:9,0:9:3.43:0,3,20	0/0:11,0:10:20.97:0,21,365	0/0:4,0:7:3.43:0,3,20	./.	0/0:10,0:9:27.08:0,27,892	0/1:8,0:10:22.16:22,0,61	0/0:13,0:13:15.03:0,15,235	0/0:13,0:13:18.25:0,18,215	0/0:13,0:10:27.01:0,27,333	0/0:8,0:7:14.96:0,15,301	0/0:7,0:7:15.05:0,15,227	0/0:12,0:12:20.89:0,21,204	0/0:7,0:4:2.87:0,3,97	0/0:13,0:11:12.04:0,12,486	0/0:18,0:15:14.69:0,15,630	0/0:14,0:12:9.03:0,9,414	0/0:16,0:14:2.76:0,3,224	0/0:18,0:16:36.04:0,36,424	0/0:5,0:4:0.34:0,0,137	0/0:4,0:2:3.01:0,3,99
chr10	66938020	.	CT	C	7061.96	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=7.927;DP=568;FS=10.585;HRun=10;HaplotypeScore=54.4445;InbreedingCoeff=0.9654;MQ=61.12;MQ0=7;MQRankSum=-0.574;QD=17.88;ReadPosRankSum=4.180;VQSLOD=4.8592;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,99,1094	0/0:8,0:8:24.04:0,24,254	0/0:17,0:12:19.46:0,19,156	0/0:15,0:6:8.97:0,9,83	1/1:9,30:38:36.51:606,37,0	1/1:5,18:22:43.32:388,43,0	1/1:4,11:15:26.98:233,27,0	0/0:27,0:25:52.44:0,52,543	1/1:3,12:15:35.99:313,36,0	1/1:2,23:25:68.98:599,69,0	1/1:5,24:26:47.97:417,48,0	1/1:3,13:16:23.98:208,24,0	0/0:14,0:14:27.35:0,27,312	1/1:2,11:13:26.99:233,27,0	1/1:3,17:20:38.99:339,39,0	1/1:0,21:22:52.81:448,53,0	1/1:2,24:26:50.98:443,51,0	1/1:4,2:6:12:104,12,0	1/1:0,15:15:44.97:386,45,0	1/1:6,27:33:71.94:623,72,0	1/1:3,17:20:5.80:279,6,0	0/0:19,1:20:19.02:0,19,424	0/0:17,0:17:44.95:0,45,479	0/0:19,0:19:51.12:0,51,548	1/1:4,14:18:26.98:234,27,0	1/1:5,20:26:59:501,59,0	1/1:4,20:25:58.83:501,59,0	1/1:0,8:8:24:208,24,0
chr10	66938680	.	GTT	G	9498.10	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=9.852;DP=538;FS=4.863;HRun=10;HaplotypeScore=71.9602;InbreedingCoeff=0.9672;MQ=58.26;MQ0=5;MQRankSum=4.463;QD=25.74;ReadPosRankSum=3.308;VQSLOD=4.9382;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:19:41.46:0,41,740	0/0:7,0:7:18.06:0,18,285	0/0:7,0:4:9.47:0,9,110	0/0:10,0:4:10.79:0,11,99	0/0:28,0:28:62.72:0,63,999	1/1:4,25:29:69.16:768,69,0	1/1:1,14:15:39.06:419,39,0	0/0:35,0:34:93.29:0,93,1423	1/1:1,7:8:18.05:201,18,0	1/1:4,23:27:69.16:759,69,0	1/1:4,22:24:54.06:600,54,0	1/1:1,21:22:51.13:568,51,0	0/0:11,0:11:26.83:0,27,393	1/1:2,20:22:54.14:602,54,0	1/1:2,20:22:51.13:569,51,0	1/1:1,15:16:42.11:468,42,0	1/1:5,18:21:47.42:534,47,0	1/1:1,11:12:30.08:334,30,0	1/1:2,16:17:48.13:535,48,0	1/1:2,30:30:75.18:834,75,0	1/1:3,24:27:54.12:602,54,0	0/0:22,0:21:26.87:0,27,531	0/0:14,0:13:24.08:0,24,366	0/0:12,0:13:27.09:0,27,429	1/1:1,14:15:30.08:334,30,0	1/1:3,18:21:54.14:602,54,0	1/1:7,25:32:63.17:703,63,0	1/1:0,2:2:6.02:67,6,0
chr10	66940997	.	ATATATATATATATATATATATATATATATATG	A	6945.96	PASS	AB=0.824;AC=32;AF=0.800;AN=40;BaseQRankSum=4.405;DP=231;FS=1.245;HRun=0;HaplotypeScore=154.8388;InbreedingCoeff=0.3812;MQ=45.67;MQ0=2;MQRankSum=0.737;QD=36.18;ReadPosRankSum=3.842;VQSLOD=3.7122;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:10,12:22:11.82:648,0,12	./.	0/1:2,0:1:0:0,0,0	0/0:10,0:5:7.84:0,8,423	0/0:1,0:1:3.01:0,3,48	1/1:4,7:11:3.01:249,3,0	1/1:8,0:8:3.01:52,3,0	0/0:14,0:14:20.85:0,21,126	1/1:6,8:14:6.02:498,6,0	1/1:6,0:6:6.01:73,6,0	1/1:1,7:8:3.01:249,3,0	1/1:5,11:16:9.03:747,9,0	./.	1/1:6,10:16:3.01:249,3,0	1/1:5,11:16:6.02:498,6,0	1/1:3,8:11:12.04:996,12,0	./.	./.	1/1:4,0:4:3:27,3,0	1/1:1,4:5:3.01:249,3,0	./.	./.	./.	./.	1/1:3,4:7:6.02:498,6,0	1/1:6,11:17:26.49:441,26,0	1/1:6,17:23:15.05:1245,15,0	1/1:6,0:6:15.05:228,15,0
chr10	66941027	.	ATG	A	1363.95	PASS	AC=38;AF=0.792;AN=48;BaseQRankSum=3.112;DP=184;FS=8.390;HRun=0;HaplotypeScore=66.2123;InbreedingCoeff=0.4600;MQ=50.18;MQ0=1;MQRankSum=-0.236;QD=8.27;ReadPosRankSum=2.576;VQSLOD=2.1392;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,0:12:2.96:19,3,0	./.	./.	0/0:11,0:3:8.72:0,9,58	0/0:1,0:1:3:0,3,25	1/1:7,0:7:2.94:18,3,0	1/1:7,0:7:14.98:125,15,0	1/1:0,23:23:65.57:488,66,0	1/1:8,0:8:5.88:37,6,0	1/1:0,6:6:2.92:18,3,0	1/1:7,0:7:2.96:19,3,0	1/1:11,0:11:8.85:56,9,0	0/0:1,0:1:2.97:0,3,20	1/1:10,0:10:2.96:19,3,0	1/1:11,0:11:5.88:37,6,0	1/1:8,0:8:11.77:74,12,0	1/1:5,0:5:2.65:22,3,0	1/1:1,0:1:2.94:18,3,0	1/1:0,8:8:23.92:189,24,0	1/1:4,0:4:2.94:18,3,0	1/1:5,0:5:8.95:68,9,0	./.	0/0:3,0:3:5.99:0,6,50	0/0:1,0:1:2.99:0,3,24	1/1:4,0:4:5.88:37,6,0	1/1:11,0:11:20.79:146,21,0	1/1:17,0:17:14.78:93,15,0	./.
chr10	66941279	.	CTG	C	467.37	PASS	AB=0.957;AC=23;AF=0.442;AN=52;BaseQRankSum=4.741;DP=359;FS=4.014;HRun=0;HaplotypeScore=105.3038;InbreedingCoeff=0.3317;MQ=42.56;MQ0=50;MQRankSum=-5.798;QD=2.77;ReadPosRankSum=0.240;VQSLOD=2.2420;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:15:3.45:0,3,23	0/0:9,0:6:8.97:0,9,70	0/0:17,0:6:6.02:0,6,79	0/0:31,0:7:17.32:0,17,177	0/0:6,0:5:15.05:0,15,269	0/1:10,1:11:27.94:28,0,31	0/1:16,0:16:12.05:12,0,50	0/0:15,0:13:16.34:0,16,235	1/1:5,1:3:5.97:45,6,0	0/1:11,1:8:3.04:80,0,3	./.	1/1:8,0:7:5.90:37,6,0	0/0:18,0:17:38.33:0,38,615	1/1:13,1:14:5.88:36,6,0	1/1:12,1:17:8.83:59,9,0	1/1:8,3:11:8.15:48,8,0	0/1:10,1:8:15.89:71,0,16	./.	1/1:6,0:4:5.94:41,6,0	0/0:13,1:13:1.82:0,2,5	0/1:15,0:5:0:0,0,0	0/0:12,0:12:24.08:0,24,431	0/0:10,0:8:21.07:0,21,388	0/0:28,0:25:60.17:0,60,1032	1/1:13,0:9:5.49:41,5,0	0/1:11,0:11:37.43:73,0,37	0/1:13,0:12:26:45,0,26	1/1:4,0:3:2.96:19,3,0
chr10	66941283	.	CTGTCTGTCTG	C	2682.65	PASS	AB=1.000;AC=32;AF=0.615;AN=52;BaseQRankSum=6.070;DP=360;FS=2.626;HRun=0;HaplotypeScore=119.2026;InbreedingCoeff=0.5595;MQ=38.60;MQ0=55;MQRankSum=-5.362;QD=13.22;ReadPosRankSum=-1.989;VQSLOD=2.3517;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:13:1.55:0,2,5	0/0:8,0:5:8.89:0,9,82	0/0:11,0:2:2.80:0,3,13	0/0:29,0:6:8.28:0,8,91	0/0:6,0:5:15.05:0,15,417	1/1:9,1:10:8.89:90,9,0	0/1:19,0:18:67.07:68,0,67	1/1:3,12:13:35.96:524,36,0	1/1:5,1:2:3.01:86,3,0	1/1:11,1:8:17.94:307,18,0	./.	1/1:6,0:5:3.01:55,3,0	0/0:19,0:17:40.48:0,40,948	1/1:13,1:13:5.56:68,6,0	1/1:16,1:16:2.91:53,3,0	1/1:8,3:11:15.03:265,15,0	0/1:14,0:8:61.85:157,0,62	./.	1/1:7,0:4:6.91:125,7,0	1/1:14,1:13:3:27,3,0	1/1:15,0:4:0.47:1,0,0	0/0:14,0:14:24.08:0,24,650	0/0:10,0:8:21.07:0,21,749	0/0:31,0:23:51.12:0,51,1350	1/1:13,0:9:12.03:161,12,0	1/1:13,0:12:30.02:479,30,0	1/1:12,0:11:17.89:336,18,0	1/1:4,0:3:3.01:57,3,0
chr10	66941287	.	CTG	C	499.92	PASS	AB=1.000;AC=28;AF=0.519;AN=54;BaseQRankSum=7.159;DP=375;FS=5.638;HRun=0;HaplotypeScore=96.1160;InbreedingCoeff=0.2955;MQ=32.76;MQ0=67;MQRankSum=-6.125;QD=2.34;ReadPosRankSum=-0.787;VQSLOD=1.5381;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:11:0.47:0,0,1	0/0:8,0:5:5.07:0,5,33	0/0:10,1:2:2.80:0,3,13	0/0:26,1:3:5.81:0,6,48	0/0:6,0:5:15.05:0,15,267	0/1:12,0:10:11.97:12,0,34	0/1:19,0:17:12.85:13,0,45	1/1:17,0:15:6.07:101,6,0	1/1:8,0:2:2.88:15,3,0	1/1:13,0:8:1.66:72,2,0	./.	1/1:5,0:4:2.96:19,3,0	0/0:21,0:18:39.08:0,39,584	0/1:13,0:12:10.62:12,0,11	1/1:16,2:17:2.95:19,3,0	1/1:12,0:11:5.74:31,6,0	0/1:15,0:8:31.03:31,0,37	0/0:5,0:1:2.88:0,3,15	0/1:8,0:5:36.77:42,0,37	1/1:15,0:13:0.89:2,1,0	0/1:16,0:4:0:0,0,0	0/0:14,0:14:24.08:0,24,427	0/0:12,0:10:21.07:0,21,380	0/0:33,0:24:48.12:0,48,861	1/1:13,0:9:5.94:43,6,0	1/1:14,1:12:6.28:130,6,0	1/1:9,2:10:13.62:98,14,0	1/1:4,0:3:2.96:19,3,0
chr10	66941291	.	CTG	C	766.80	PASS	AB=0.994;AC=31;AF=0.620;AN=50;BaseQRankSum=5.662;DP=439;FS=17.529;HRun=0;HaplotypeScore=100.2830;InbreedingCoeff=0.4585;MQ=30.95;MQ0=82;MQRankSum=-7.477;QD=2.55;ReadPosRankSum=-3.594;VQSLOD=-0.0339;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:14,3:12:0.47:0,0,1	1/1:7,1:5:8.91:74,9,0	./.	0/1:26,0:2:0:0,0,0	0/0:7,0:6:11.90:0,12,113	0/1:16,0:14:11.55:12,0,13	0/1:22,1:21:12.59:13,0,14	1/1:19,0:17:23.36:130,23,0	1/1:9,0:3:2.98:22,3,0	1/1:17,0:12:24.03:144,24,0	./.	1/1:11,0:7:2.96:19,3,0	0/0:21,0:18:29.98:0,30,243	1/1:16,0:14:2.90:18,3,0	1/1:26,0:25:5.10:26,5,0	1/1:14,0:13:5.93:41,6,0	0/1:17,0:10:21.58:40,0,22	0/1:6,0:1:0:0,0,0	1/1:9,0:5:9.45:58,9,0	0/1:20,0:17:0.01:0,0,0	0/1:20,0:6:0:0,0,0	0/0:14,0:14:17.79:0,18,153	0/0:12,0:10:15.90:0,16,169	0/0:34,0:25:40.25:0,40,350	./.	1/1:18,0:13:29.70:186,30,0	1/1:16,0:14:16.82:114,17,0	1/1:10,0:6:5.45:24,5,0
chr10	66941371	.	GTGTGTGTGTGTGTGTA	G	2466.88	PASS	AB=0.986;AC=30;AF=0.536;AN=56;BaseQRankSum=7.888;DP=440;FS=4.426;HRun=0;HaplotypeScore=143.2712;InbreedingCoeff=0.6228;MQ=40.74;MQ0=67;MQRankSum=-1.487;QD=9.56;ReadPosRankSum=-0.048;VQSLOD=2.2867;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:10:11.97:0,12,96	0/0:7,0:2:2.99:0,3,23	0/0:16,0:7:21.04:0,21,218	0/0:21,0:13:32.21:0,32,354	0/0:18,0:16:24.48:0,24,596	1/1:18,0:16:11.77:265,12,0	1/1:21,0:19:10.69:97,11,0	0/0:15,0:14:35.38:0,35,274	0/1:14,0:10:0.34:89,0,0	1/1:20,0:17:32.93:384,33,0	1/1:10,1:11:11.99:104,12,0	0/1:22,0:18:0.84:178,0,1	0/0:17,0:15:26.64:0,27,816	0/1:16,1:14:35.76:36,0,61	1/1:14,0:12:11.87:99,12,0	1/1:10,1:9:1.51:47,2,0	1/1:16,0:12:9.71:120,10,0	1/1:4,0:1:2.98:21,3,0	0/1:16,0:9:99:151,0,164	1/1:8,1:7:8.99:74,9,0	1/1:18,0:8:14.73:145,15,0	0/0:17,0:17:24.03:0,24,686	0/0:17,0:12:9.03:0,9,508	0/0:33,0:24:47.73:0,48,1700	1/1:18,0:15:16.17:127,16,0	1/1:13,0:10:20.33:264,20,0	1/1:16,0:14:36.80:462,37,0	0/0:8,0:3:0:0,0,0
chr10	66941373	.	GTGTGTGTGTGTGTA	G	3159.82	PASS	AB=0.900;AC=32;AF=0.593;AN=54;BaseQRankSum=7.569;DP=429;FS=4.255;HRun=0;HaplotypeScore=132.7752;InbreedingCoeff=0.7355;MQ=42.00;MQ0=63;MQRankSum=-1.763;QD=12.90;ReadPosRankSum=0.235;VQSLOD=2.5285;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:11:11.97:0,12,96	0/0:7,0:2:2.99:0,3,23	0/0:17,0:8:24.05:0,24,253	0/0:22,0:14:35.22:0,35,383	0/0:17,0:15:24.48:0,24,495	1/1:17,0:15:14.87:355,15,0	1/1:20,0:18:11.32:99,11,0	0/0:15,0:14:34.13:0,34,270	1/1:11,1:10:16.46:113,16,0	1/1:17,1:16:44.71:490,45,0	1/1:10,0:11:11.99:121,12,0	1/1:19,1:18:17.09:229,17,0	0/0:18,0:17:32.89:0,33,766	0/1:12,3:14:18.15:18,0,46	1/1:12,1:12:11.71:121,12,0	1/1:8,1:8:7.08:55,7,0	1/1:16,0:12:9.74:169,10,0	1/1:4,0:1:2.98:21,3,0	0/1:15,0:9:99:227,0,134	1/1:8,1:7:11.98:98,12,0	1/1:18,0:8:14.52:169,15,0	0/0:17,0:17:24.03:0,24,593	0/0:16,0:12:9.03:0,9,437	0/0:33,0:24:47.73:0,48,1501	1/1:12,3:13:17.74:174,18,0	1/1:12,1:10:29.83:361,30,0	1/1:13,2:14:38.87:546,39,0	./.
chr10	66941375	.	GTGTGTGTGTGTA	G	2932.11	PASS	AB=0.967;AC=32;AF=0.593;AN=54;BaseQRankSum=7.776;DP=423;FS=5.095;HRun=0;HaplotypeScore=125.5097;InbreedingCoeff=0.7446;MQ=43.25;MQ0=59;MQRankSum=-1.366;QD=12.07;ReadPosRankSum=0.424;VQSLOD=2.2959;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:13:17.96:0,18,144	0/0:4,0:2:2.99:0,3,23	0/0:17,0:8:24.05:0,24,253	0/0:23,0:15:38.23:0,38,421	0/0:16,0:15:24.45:0,24,402	1/1:12,5:15:14.97:432,15,0	1/1:19,0:17:11.47:99,11,0	0/0:14,0:13:33.82:0,34,270	1/1:12,0:10:16.88:113,17,0	1/1:19,0:17:43.55:437,44,0	1/1:11,0:11:11.98:97,12,0	1/1:19,0:17:17.21:214,17,0	0/0:18,0:17:32.74:0,33,669	0/1:16,0:14:22.63:23,0,27	1/1:13,0:12:11.56:98,12,0	1/1:11,0:9:10.41:80,10,0	1/1:16,0:12:9.72:122,10,0	1/1:4,0:1:2.98:21,3,0	0/1:13,1:9:99:203,0,113	1/1:9,0:7:11.98:98,12,0	1/1:18,0:8:14.78:145,15,0	0/0:17,0:17:24.03:0,24,511	0/0:16,0:12:9.03:0,9,366	0/0:32,0:24:47.73:0,48,1298	1/1:15,0:13:17.74:150,18,0	1/1:14,0:11:31.99:315,32,0	1/1:15,0:14:38.86:491,39,0	./.
chr10	66941423	.	TG	T	13249.75	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=9.349;DP=481;FS=0.000;HRun=2;HaplotypeScore=87.4430;InbreedingCoeff=0.9457;MQ=66.82;MQ0=1;MQRankSum=-2.017;QD=35.43;ReadPosRankSum=2.580;VQSLOD=5.1836;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,36:38:99:1359,105,0	1/1:0,8:8:21.07:273,21,0	0/0:9,0:8:21.07:0,21,313	0/0:18,0:15:14.87:0,15,474	0/0:14,0:14:39.13:0,39,584	1/1:0,13:13:33.11:428,33,0	1/1:0,29:29:78.24:1012,78,0	1/1:0,32:32:96.31:1246,96,0	1/1:0,15:14:42.14:545,42,0	1/1:0,19:19:57.16:712,57,0	1/1:0,13:13:36.12:463,36,0	1/1:0,18:18:48.16:623,48,0	0/0:16,0:16:45.15:0,45,674	1/1:1,16:17:36.12:463,36,0	1/1:0,26:26:69.22:896,69,0	1/1:0,18:18:54.18:701,54,0	1/1:1,15:16:27.17:527,27,0	1/1:0,1:1:3.01:39,3,0	1/1:1,12:12:36.12:467,36,0	1/1:2,19:21:51.16:657,51,0	1/1:0,18:18:51.17:662,51,0	0/0:17,0:17:51.15:0,51,726	0/0:15,0:15:45.15:0,45,671	0/0:18,0:18:48.16:0,48,718	1/1:0,18:18:48.16:623,48,0	1/1:1,16:17:48.16:623,48,0	1/1:1,21:22:66.21:851,66,0	1/1:0,2:2:6.02:78,6,0
chr10	66942223	.	C	CA	17955.86	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=7.969;DP=565;FS=1.106;HRun=1;HaplotypeScore=73.6184;InbreedingCoeff=0.9951;MQ=86.60;MQ0=0;MQRankSum=-3.741;QD=44.67;ReadPosRankSum=0.513;VQSLOD=4.6969;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,25:27:75.26:1199,75,0	1/1:0,7:7:21.07:336,21,0	0/0:15,0:15:44.82:0,45,595	0/0:22,0:22:51.64:0,52,703	0/0:41,0:41:99:0,123,1719	1/1:1,8:9:24.08:384,24,0	1/1:1,12:13:30.10:480,30,0	1/1:3,39:42:99:1896,120,0	1/1:0,17:17:51.17:815,51,0	1/1:0,28:28:84.29:1342,84,0	1/1:0,26:26:75.21:1171,75,0	1/1:0,22:22:66.23:1055,66,0	0/0:19,0:19:57.19:0,57,795	1/1:0,8:8:21.07:333,21,0	1/1:0,24:24:69.24:1103,69,0	1/1:0,12:12:36.12:574,36,0	1/1:0,17:17:48.16:767,48,0	1/1:0,7:7:18.06:287,18,0	1/1:2,11:13:36.12:576,36,0	1/1:0,26:26:66.23:1055,66,0	1/1:0,15:15:42.14:671,42,0	0/0:23,0:23:63.21:0,63,878	0/0:24,0:24:72.24:0,72,1006	0/0:19,0:19:57.19:0,57,797	1/1:0,18:18:48.16:768,48,0	1/1:1,25:26:75.24:1177,75,0	1/1:0,35:35:99:1679,105,0	1/1:0,10:10:18.06:288,18,0
chr10	66943743	.	G	GCTCTAGTCA	48487.95	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=-9.159;DP=612;FS=6.151;HRun=0;HaplotypeScore=145.5481;InbreedingCoeff=0.9928;MQ=86.68;MQ0=0;MQRankSum=-17.041;QD=109.21;ReadPosRankSum=2.007;VQSLOD=5.8523;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:9,17:28:52.44:2392,52,0	1/1:2,6:8:21.07:991,21,0	0/0:32,0:32:81.28:0,81,2207	0/0:25,0:25:63.19:0,63,1717	0/0:29,0:29:84.27:0,84,2494	1/1:11,15:27:66.23:3043,66,0	1/1:5,14:19:48.16:2308,48,0	1/1:14,18:34:99:4351,102,0	1/1:8,8:18:45.15:2011,45,0	1/1:6,19:27:78.25:3560,78,0	1/1:8,8:19:36.12:1515,36,0	1/1:2,12:14:39.13:1901,39,0	0/0:22,0:22:63.20:0,63,1784	1/1:6,10:18:42.14:2042,42,0	1/1:13,16:32:72.25:3448,72,0	1/1:8,18:30:72:3314,72,0	1/1:7,5:16:30.10:1253,30,0	1/1:3,4:7:21.07:1000,21,0	1/1:7,11:20:57.18:2261,57,0	1/1:7,14:25:54.19:2553,54,0	1/1:13,11:29:42.14:1895,42,0	0/0:30,0:30:87.30:0,87,2593	0/0:11,0:11:33.11:0,33,1001	0/0:19,0:19:54.19:0,54,1630	1/1:6,12:18:45.15:2116,45,0	1/1:4,11:19:57.20:2341,57,0	1/1:14,16:32:78.27:3609,78,0	1/1:0,4:4:12.04:587,12,0
chr10	66944164	.	AATGTGTGC	A	7103.72	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=6.844;DP=441;FS=7.685;HRun=0;HaplotypeScore=131.8748;InbreedingCoeff=0.8878;MQ=87.29;MQ0=2;MQRankSum=-4.361;QD=31.71;ReadPosRankSum=4.186;VQSLOD=3.9146;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:8:5.99:0,6,49	1/1:5,0:5:2.38:64,2,0	0/0:35,0:23:66.15:0,66,1171	0/0:46,0:32:69.43:0,69,1089	0/0:17,0:17:12.46:0,12,669	1/1:17,1:19:42.11:662,42,0	1/1:8,0:8:18.03:218,18,0	0/0:21,0:20:30.06:0,30,260	1/1:9,3:12:35.97:614,36,0	1/1:0,14:15:37.29:465,37,0	1/1:0,14:14:2.96:19,3,0	1/1:14,3:17:51.03:842,51,0	0/0:10,0:10:30.08:0,30,759	1/1:10,1:11:24.06:396,24,0	1/1:7,1:8:15.04:254,15,0	1/1:12,0:12:36.08:503,36,0	1/1:16,0:16:38.61:460,39,0	1/1:10,0:10:29.93:379,30,0	1/1:0,10:10:30.03:389,30,0	1/1:8,2:11:30.05:452,30,0	1/1:22,0:22:48.08:672,48,0	0/0:23,0:23:69.22:0,69,1995	0/0:22,0:22:66.17:0,66,2029	0/0:35,0:35:93.31:0,93,2785	1/1:6,1:7:15.03:208,15,0	1/1:7,0:7:18:206,18,0	1/1:0,1:14:3.01:79,3,0	1/1:6,0:6:18.03:225,18,0
chr10	66944170	.	TGC	T	3645.15	PASS	AB=1.000;AC=41;AF=0.759;AN=54;BaseQRankSum=9.973;DP=432;FS=4.058;HRun=0;HaplotypeScore=98.6961;InbreedingCoeff=0.8137;MQ=78.12;MQ0=7;MQRankSum=-1.030;QD=15.06;ReadPosRankSum=2.483;VQSLOD=3.1400;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	1/1:3,1:4:11.99:102,12,0	0/0:31,0:19:43.09:0,43,446	0/0:39,0:25:30.26:0,30,337	0/0:24,0:24:34.45:0,34,422	1/1:18,0:18:35.90:290,36,0	1/1:10,0:8:14.95:120,15,0	1/1:19,0:18:39.92:344,40,0	1/1:12,0:12:35.82:277,36,0	1/1:16,0:15:27.77:234,28,0	1/1:14,0:14:2.94:18,3,0	1/1:16,0:16:40.04:334,40,0	0/1:13,0:12:13.88:14,0,300	1/1:10,0:10:20.95:170,21,0	1/1:7,0:7:11.98:98,12,0	1/1:10,0:10:29.89:238,30,0	1/1:15,0:15:32.47:233,32,0	1/1:9,0:8:23.89:185,24,0	1/1:10,0:10:25.46:190,25,0	1/1:7,1:8:20.68:146,21,0	1/1:19,0:19:38.92:319,39,0	0/0:26,0:26:35.81:0,36,960	0/0:24,0:24:46.08:0,46,922	0/0:38,0:38:65.14:0,65,1315	1/1:7,0:7:14.89:110,15,0	1/1:6,0:6:10.48:68,10,0	1/1:13,0:13:2.98:21,3,0	1/1:6,0:6:17.89:134,18,0
chr10	66944180	.	TGTGTGTGTGA	T	4091.76	PASS	AB=1.000;AC=44;AF=0.786;AN=56;BaseQRankSum=10.266;DP=450;FS=1.076;HRun=0;HaplotypeScore=156.2956;InbreedingCoeff=0.6409;MQ=57.77;MQ0=11;MQRankSum=-1.511;QD=12.55;ReadPosRankSum=-1.295;VQSLOD=2.6957;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:15:0.47:1,0,0	1/1:6,0:6:11.98:227,12,0	0/0:21,0:9:8.88:0,9,68	0/1:30,0:16:22.30:22,0,50	0/1:26,0:26:70.96:159,0,71	1/1:20,1:21:41.97:409,42,0	1/1:12,0:10:2.36:24,2,0	1/1:19,0:18:19.69:137,20,0	1/1:13,2:15:29.60:420,30,0	1/1:15,0:14:8.97:71,9,0	1/1:15,0:14:5.93:50,6,0	1/1:15,2:17:41.70:502,42,0	0/0:12,0:11:13.17:0,13,872	1/1:6,1:7:17.98:206,18,0	1/1:10,1:11:17.99:209,18,0	1/1:9,0:9:23.92:193,24,0	1/1:18,0:17:19.01:144,19,0	1/1:12,0:11:4.64:163,5,0	1/1:11,0:11:17.89:138,18,0	1/1:9,2:11:23.93:305,24,0	1/1:17,0:17:23.92:192,24,0	0/0:26,0:26:57.13:0,57,1569	0/0:27,0:27:57.09:0,57,1515	0/0:38,0:36:68.97:0,69,1925	1/1:7,1:8:15:136,15,0	1/1:9,0:9:20.92:166,21,0	1/1:14,0:14:9:131,9,0	1/1:8,0:7:11.91:87,12,0
chr10	66944188	.	TGA	T	4711.30	PASS	AB=0.985;AC=45;AF=0.804;AN=56;BaseQRankSum=6.771;DP=485;FS=10.677;HRun=0;HaplotypeScore=109.8415;InbreedingCoeff=0.6128;MQ=54.99;MQ0=13;MQRankSum=0.154;QD=12.24;ReadPosRankSum=-5.781;VQSLOD=2.5172;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:14:5.99:49,6,0	1/1:6,0:6:17.98:151,18,0	0/0:15,0:4:8.88:0,9,68	0/1:20,0:10:21.35:21,0,51	0/1:26,0:26:0.51:1,0,82	1/1:28,0:28:50.95:428,51,0	1/1:13,0:11:3.38:26,3,0	1/1:17,0:15:40.73:286,41,0	1/1:18,0:18:38.66:327,39,0	1/1:17,0:16:17.76:164,18,0	1/1:19,0:18:17.91:150,18,0	1/1:20,0:20:53.78:434,54,0	0/1:12,0:11:32.22:32,0,208	1/1:11,0:11:17.71:151,18,0	1/1:15,0:15:23.94:203,24,0	1/1:11,0:11:26.91:218,27,0	1/1:18,0:17:27.38:215,27,0	1/1:14,0:13:18.17:213,18,0	1/1:15,0:15:10.09:169,10,0	1/1:19,0:19:41.88:341,42,0	1/1:29,0:29:53.88:439,54,0	0/0:28,0:28:5.83:0,6,552	0/0:24,0:23:31.80:0,32,531	0/0:33,0:31:21.20:0,21,697	1/1:13,0:13:29.92:244,30,0	1/1:1,11:12:29.91:239,30,0	1/1:10,0:10:14.98:125,15,0	1/1:7,0:6:11.91:87,12,0
chr10	66944190	.	AGTGTGTGTGTGTGTGTGT	A	2031.56	PASS	AB=1.000;AC=14;AF=0.259;AN=54;BaseQRankSum=8.449;DP=486;FS=46.232;HRun=0;HaplotypeScore=227.8824;InbreedingCoeff=0.0946;MQ=54.77;MQ0=13;MQRankSum=-1.855;QD=10.92;ReadPosRankSum=4.431;VQSLOD=1.0144;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:6.01:0,6,98	0/0:6,0:6:18.06:0,18,510	./.	0/0:19,0:9:2.60:0,3,10	1/1:6,18:25:18.02:615,18,0	0/1:28,0:28:99:180,0,149	1/1:13,0:11:2.71:24,3,0	0/0:15,0:13:29.93:0,30,334	0/1:20,0:20:99:408,0,146	0/0:15,0:14:17.55:0,18,137	0/0:19,0:18:17.79:0,18,133	0/1:18,0:18:79.26:330,0,79	0/0:11,0:11:29.89:0,30,1872	1/1:11,0:11:5.84:142,6,0	0/1:16,0:16:99:102,0,100	0/1:12,0:12:30.90:31,0,69	0/0:18,0:17:26.03:0,26,218	0/0:14,0:13:14.93:0,15,214	0/0:16,0:16:19.48:0,19,158	0/1:20,0:20:99:210,0,184	0/0:31,0:31:29.72:0,30,307	0/0:27,0:27:54.15:0,54,2992	0/0:27,0:26:54.16:0,54,2917	0/0:28,0:31:54.12:0,54,3170	0/1:13,0:13:50.89:51,0,177	0/0:13,0:13:23.88:0,24,236	0/1:10,0:10:94.67:95,0,100	0/0:7,0:6:0.13:0,0,16
chr10	66945118	.	A	AT	7813.36	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-10.663;DP=417;FS=0.912;HRun=9;HaplotypeScore=37.7610;InbreedingCoeff=0.9340;MQ=72.55;MQ0=0;MQRankSum=-1.149;QD=27.42;ReadPosRankSum=3.251;VQSLOD=4.5986;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:83.95:0,84,722	0/0:5,0:5:8.99:0,9,78	0/0:12,0:11:17.74:0,18,131	0/0:6,0:6:2.15:0,2,45	0/0:11,0:11:29.98:0,30,258	1/1:5,11:16:36.06:385,36,0	1/1:4,24:29:42.97:685,43,0	0/0:30,0:30:74.94:0,75,645	1/1:4,14:18:42.11:464,42,0	1/1:0,9:9:27.06:291,27,0	1/1:1,11:12:30.08:332,30,0	1/1:1,10:11:27.07:299,27,0	0/0:16,0:16:38.98:0,39,338	1/1:1,11:12:33.09:365,33,0	1/1:0,13:13:39.11:431,39,0	1/1:2,11:14:35.93:379,36,0	1/1:3,19:22:57.13:620,57,0	1/1:0,17:17:45.12:497,45,0	1/1:3,24:27:63.19:745,63,0	1/1:0,15:15:39.11:431,39,0	1/1:1,7:8:23.98:249,24,0	0/0:3,0:3:6:0,6,52	0/0:10,0:10:26.99:0,27,234	0/0:9,0:9:23.99:0,24,208	1/1:0,16:16:45.12:498,45,0	1/1:2,13:15:39.11:431,39,0	1/1:5,20:26:56.99:612,57,0	1/1:2,3:5:9.02:100,9,0
chr10	66945307	.	A	AAAATAAAT	3017.41	PASS	AC=30;AF=0.833;AN=36;BaseQRankSum=-3.103;DP=224;FS=10.387;HRun=0;HaplotypeScore=65.6195;InbreedingCoeff=0.5130;MQ=66.23;MQ0=1;MQRankSum=0.170;QD=21.55;ReadPosRankSum=-0.125;VQSLOD=1.0291;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:14.87:0,15,196	0/0:3,0:3:8.81:0,9,87	./.	./.	./.	1/1:9,2:10:15.05:538,15,0	./.	./.	./.	1/1:7,0:7:9.03:208,9,0	1/1:5,0:5:6.02:77,6,0	1/1:1,0:1:3.01:64,3,0	0/0:5,0:5:6.02:0,6,121	1/1:6,0:6:6.02:101,6,0	1/1:5,0:5:6.02:121,6,0	1/1:7,0:7:3.01:66,3,0	1/1:31,0:33:30.08:653,30,0	1/1:15,2:17:18.06:556,18,0	1/1:9,0:9:3.01:55,3,0	1/1:9,0:9:6.02:97,6,0	./.	./.	./.	./.	1/1:12,0:12:9.03:190,9,0	1/1:2,1:3:3.01:121,3,0	1/1:5,0:5:6.02:183,6,0	1/1:10,0:9:6.02:109,6,0
chr10	66945346	.	ATAAATAAAT	A	983.93	PASS	AB=1.000;AC=6;AF=0.111;AN=54;BaseQRankSum=1.344;DP=207;FS=5.906;HRun=0;HaplotypeScore=77.8017;InbreedingCoeff=0.3841;MQ=68.69;MQ0=4;MQRankSum=0.248;QD=17.26;ReadPosRankSum=-1.403;VQSLOD=1.4447;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,18:19:18.06:521,18,0	1/1:0,4:4:12.04:332,12,0	0/0:5,0:4:8.97:0,9,85	0/1:11,0:10:34.08:34,0,89	0/0:2,0:2:3.01:0,3,88	0/0:8,0:8:24.07:0,24,827	0/0:3,0:3:9.03:0,9,146	0/1:23,0:20:99:225,0,480	0/0:3,0:3:9.03:0,9,116	0/0:6,0:6:18.06:0,18,496	0/0:6,0:6:18.06:0,18,338	0/0:2,0:2:6.02:0,6,154	0/0:4,0:4:12.04:0,12,351	0/0:3,0:3:9.03:0,9,246	0/0:7,0:7:21.07:0,21,403	0/0:4,0:4:12.04:0,12,252	0/0:36,0:36:99:0,102,2405	0/0:15,0:15:45.04:0,45,1062	0/0:10,0:7:20.95:0,21,354	0/0:4,0:4:9.03:0,9,281	0/0:1,0:1:3.01:0,3,39	0/0:1,0:1:3.01:0,3,39	./.	0/0:3,0:3:9.03:0,9,116	0/0:7,0:7:18.06:0,18,577	0/0:4,0:4:9.92:0,10,208	0/0:6,0:6:18.06:0,18,403	0/0:10,0:10:30.05:0,30,714
chr10	66945354	.	AT	A	581.80	PASS	AB=0.769;AC=6;AF=0.107;AN=56;BaseQRankSum=2.424;DP=239;FS=0.760;HRun=1;HaplotypeScore=56.0620;InbreedingCoeff=0.4582;MQ=73.62;MQ0=2;MQRankSum=-0.290;QD=8.95;ReadPosRankSum=-0.979;VQSLOD=0.5072;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:20:20.98:192,21,0	1/1:4,0:4:12:115,12,0	0/0:8,0:7:11.77:0,12,124	0/1:16,2:15:55.61:56,0,88	0/0:1,0:1:3.01:0,3,39	0/0:8,0:8:23.83:0,24,235	0/0:3,0:3:8.94:0,9,94	0/1:10,13:20:41.21:350,0,41	0/0:5,0:5:12.03:0,12,141	0/0:6,0:6:18.02:0,18,212	0/0:8,0:8:24.06:0,24,282	0/0:4,0:4:12.04:0,12,159	0/0:7,0:7:21.04:0,21,247	0/0:4,0:4:11.99:0,12,144	0/0:8,0:8:24.08:0,24,313	0/0:5,0:5:14.94:0,15,143	0/0:36,0:36:93.69:0,94,1050	0/0:16,0:16:47.90:0,48,487	0/0:11,0:10:29.96:0,30,338	0/0:5,0:5:12.03:0,12,146	0/0:3,0:3:9.02:0,9,102	0/0:3,0:3:9.03:0,9,116	0/0:2,0:2:6.01:0,6,64	0/0:4,0:4:12:0,12,136	0/0:7,0:7:18.06:0,18,246	0/0:5,0:5:12.50:0,12,143	0/0:7,0:7:21.05:0,21,253	0/0:8,0:8:24.06:0,24,314
chr10	66945386	.	GA	G	4416.54	PASS	AB=0.909;AC=37;AF=0.661;AN=56;BaseQRankSum=3.150;DP=344;FS=0.000;HRun=9;HaplotypeScore=54.6875;InbreedingCoeff=0.8835;MQ=81.17;MQ0=1;MQRankSum=-2.656;QD=20.93;ReadPosRankSum=5.543;VQSLOD=4.9255;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:33.10:0,33,381	0/0:8,0:8:21.03:0,21,228	0/0:19,1:16:6.40:0,6,253	0/0:25,1:19:1.70:0,2,118	0/0:5,0:5:15.04:0,15,173	1/1:0,4:4:9:82,9,0	1/1:0,4:4:12.01:110,12,0	0/0:25,0:25:72.20:0,72,818	1/1:0,12:12:30.02:275,30,0	1/1:1,7:8:21.01:192,21,0	1/1:2,9:11:27.01:247,27,0	1/1:1,7:8:21:192,21,0	0/1:9,1:10:0.39:0,0,250	1/1:0,7:7:18.01:165,18,0	1/1:0,14:14:33.02:302,33,0	1/1:0,7:7:21.01:192,21,0	1/1:3,27:30:69.03:631,69,0	1/1:2,14:16:36.02:330,36,0	1/1:6,12:18:35.99:325,36,0	1/1:0,8:8:18.01:165,18,0	1/1:0,9:9:24.01:220,24,0	0/0:8,0:8:24.07:0,24,277	0/0:4,0:4:12.04:0,12,138	0/0:13,0:13:39.05:0,39,416	1/1:4,12:16:33.01:302,33,0	1/1:0,7:7:21.01:192,21,0	1/1:1,12:13:33.01:302,33,0	1/1:2,7:9:21:192,21,0
chr10	66945670	.	TA	T	2508.42	PASS	AB=0.769;AC=37;AF=0.661;AN=56;BaseQRankSum=6.729;DP=469;FS=1.593;HRun=16;HaplotypeScore=76.5552;InbreedingCoeff=0.3410;MQ=73.95;MQ0=2;MQRankSum=-1.267;QD=6.29;ReadPosRankSum=6.101;VQSLOD=2.8468;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:16:14.52:0,15,93	0/0:3,0:8:14.63:0,15,87	0/0:27,0:18:8.69:0,9,112	0/1:12,0:8:1.15:1,0,8	0/1:7,8:18:17.92:80,0,18	1/1:5,12:18:18.26:182,18,0	1/1:3,6:9:17.58:108,18,0	0/1:31,7:38:27.44:27,0,415	1/1:4,12:17:20.63:202,21,0	1/1:7,9:16:7.51:125,8,0	0/1:10,7:18:11.15:73,0,11	1/1:7,6:14:5.98:97,6,0	0/1:13,2:16:6.27:6,0,147	1/1:6,9:16:17.10:168,17,0	1/1:10,7:17:20.44:124,20,0	1/1:4,8:14:26.17:141,26,0	1/1:7,16:27:43.26:239,43,0	1/1:5,8:14:28.32:166,28,0	0/1:14,7:22:16.16:156,0,16	0/1:7,6:14:1.76:46,0,2	1/1:11,7:19:5.96:109,6,0	0/0:9,0:10:14.16:0,14,143	0/0:9,0:9:20.93:0,21,166	0/1:8,3:11:18.06:18,0,80	0/1:6,5:11:1.97:71,0,2	1/1:5,14:19:21.64:196,22,0	1/1:13,9:24:36.20:207,36,0	1/1:3,11:14:24.78:147,25,0
chr10	66946973	.	AT	A	2770.26	PASS	AB=0.619;AC=35;AF=0.625;AN=56;BaseQRankSum=0.552;DP=460;FS=9.728;HRun=15;HaplotypeScore=59.4244;InbreedingCoeff=0.3716;MQ=72.76;MQ0=6;MQRankSum=0.624;QD=8.08;ReadPosRankSum=2.756;VQSLOD=2.2518;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,0:28:40.99:118,41,0	1/1:2,0:4:4.06:12,4,0	0/0:24,1:19:3.66:0,4,107	0/0:11,0:8:9.82:0,10,41	0/0:14,2:18:10.57:0,11,194	1/1:5,12:16:8.31:178,8,0	0/1:5,8:13:52.29:89,0,52	1/1:9,11:19:2.69:146,3,0	0/1:3,6:10:3.13:50,0,3	1/1:7,15:23:22.97:268,23,0	1/1:2,12:15:31.54:198,32,0	1/1:4,8:13:12.77:69,13,0	0/0:8,2:10:1.67:0,2,129	1/1:3,4:9:16.61:98,17,0	1/1:5,11:15:29.50:192,30,0	1/1:5,13:17:29.46:192,29,0	1/1:2,17:20:36.59:223,37,0	0/1:8,11:19:20.29:136,0,20	0/1:8,9:18:11.70:171,0,12	1/1:4,12:16:23.56:154,24,0	1/1:3,9:13:19.75:121,20,0	0/0:14,0:14:15.51:0,16,222	0/0:16,1:18:29.94:0,30,253	0/0:21,0:21:38.99:0,39,343	1/1:6,12:19:9.37:120,9,0	0/1:6,12:20:10.21:181,0,10	0/1:11,15:25:6.17:210,0,6	0/1:2,3:4:17.43:30,0,17
chr10	66947224	.	A	AAC	1354.04	PASS	AB=0.905;AC=38;AF=0.760;AN=50;BaseQRankSum=2.165;DP=485;FS=6.401;HRun=0;HaplotypeScore=122.6309;InbreedingCoeff=0.3054;MQ=56.79;MQ0=9;MQRankSum=-1.383;QD=3.69;ReadPosRankSum=-2.628;VQSLOD=1.8323;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:23,11:34:38.54:285,0,39	0/1:12,2:14:10.69:80,0,11	./.	./.	0/1:16,0:15:0:0,0,0	1/1:13,0:12:6:52,6,0	1/1:23,0:23:12.48:130,12,0	1/1:26,0:24:8.88:80,9,0	1/1:17,0:17:6.01:69,6,0	1/1:13,0:13:16.75:99,17,0	./.	1/1:10,0:10:7.79:40,8,0	0/0:3,0:3:3.01:0,3,33	1/1:17,0:16:3.47:28,3,0	1/1:19,0:19:2.96:19,3,0	1/1:17,0:17:12.30:128,12,0	1/1:25,0:25:4.03:110,4,0	1/1:12,0:12:4.04:61,4,0	1/1:12,0:11:5.37:34,5,0	1/1:9,0:9:3:29,3,0	1/1:37,0:36:2.98:21,3,0	0/0:8,0:8:3:0,3,33	0/0:12,0:12:6.01:0,6,65	0/0:26,0:28:36.66:0,37,349	1/1:12,0:12:8.85:72,9,0	1/1:17,0:17:14.22:77,14,0	0/1:21,0:20:0.37:64,0,0	1/1:1,0:1:2.74:12,3,0
chr10	66948882	.	CTG	C	1189.86	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=0.537;DP=475;FS=36.120;HRun=0;HaplotypeScore=73.8681;InbreedingCoeff=0.9760;MQ=85.16;MQ0=0;MQRankSum=-3.992;QD=41.03;ReadPosRankSum=-3.840;VQSLOD=1.3378;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:51.17:0,51,972	0/0:7,0:7:21.07:0,21,405	0/0:19,0:19:47.99:0,48,860	0/0:16,0:16:47.95:0,48,819	0/0:19,0:19:54.19:0,54,1043	0/0:25,0:25:75.26:0,75,1435	0/0:15,0:15:42.14:0,42,798	1/1:1,28:29:84.29:1285,84,0	0/0:18,0:18:54.19:0,54,1034	0/0:21,0:21:60.21:0,60,1159	0/0:16,0:16:48.16:0,48,927	0/0:14,0:14:42.14:0,42,803	0/0:13,0:13:36.12:0,36,686	0/0:16,0:16:48.16:0,48,927	0/0:21,0:21:63.19:0,63,1173	0/0:11,0:11:33.11:0,33,629	0/0:28,0:28:81.28:0,81,1564	0/0:5,0:5:15.05:0,15,289	0/0:26,0:26:72.22:0,72,1295	0/0:20,0:20:57.14:0,57,1016	0/0:13,0:13:39.13:0,39,741	0/0:14,0:14:42.14:0,42,811	0/0:18,0:18:54.18:0,54,1009	0/0:13,0:13:39.13:0,39,753	0/0:16,0:16:48.13:0,48,846	0/0:12,0:12:36.12:0,36,680	0/0:25,0:25:75.26:0,75,1435	0/0:7,0:7:21.07:0,21,405
chr10	66949028	.	CCT	C	109.04	PASS	AB=0.879;AC=6;AF=0.107;AN=56;BaseQRankSum=2.765;DP=368;FS=31.489;HRun=0;HaplotypeScore=45.4852;InbreedingCoeff=-0.1316;MQ=54.99;MQ0=20;MQRankSum=-3.696;QD=1.38;ReadPosRankSum=-0.352;VQSLOD=0.1549;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:18:51.17:0,51,1004	0/0:3,0:2:5.91:0,6,76	0/0:31,0:9:23.34:0,23,324	0/0:29,0:5:12.04:0,12,195	0/1:15,1:14:11.74:12,0,572	0/0:6,0:6:15.05:0,15,305	0/1:10,1:10:20.78:21,0,413	0/0:22,1:21:11.44:0,11,851	0/0:7,0:7:20.52:0,21,284	0/1:15,2:14:50.67:51,0,680	0/1:17,2:18:53.31:53,0,686	0/0:9,0:8:21.07:0,21,426	0/0:13,0:11:21.07:0,21,424	0/0:17,0:15:24.08:0,24,486	0/0:23,0:19:33.11:0,33,669	0/0:21,0:20:39.13:0,39,789	0/0:5,0:5:15.05:0,15,304	0/0:6,0:6:17.85:0,18,317	0/0:4,0:4:12.04:0,12,244	0/0:16,0:15:38.79:0,39,685	0/0:8,0:8:18.06:0,18,365	0/0:6,0:5:14.84:0,15,216	0/1:11,2:13:56.37:56,0,630	0/0:8,0:8:24.08:0,24,486	0/0:12,0:9:23.91:0,24,438	0/0:6,0:5:15.05:0,15,305	0/0:12,0:12:36.12:0,36,729	0/1:2,1:3:38.89:39,0,113
chr10	66949956	.	AGAACC	A	59.45	PASS	AB=0.917;AC=5;AF=0.096;AN=52;BaseQRankSum=2.060;DP=250;FS=9.954;HRun=0;HaplotypeScore=26.9563;InbreedingCoeff=-0.0654;MQ=40.61;MQ0=33;MQRankSum=-3.047;QD=1.38;ReadPosRankSum=-1.011;VQSLOD=-0.3034;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:6:4.53:0,5,16	0/0:6,0:3:3.01:0,3,57	0/0:6,0:1:2.80:0,3,13	0/0:8,0:2:6.02:0,6,76	0/0:21,0:17:11.04:0,11,374	0/0:4,0:2:2.91:0,3,37	0/0:5,0:1:0.89:0,1,2	0/0:11,0:3:2.98:0,3,59	0/1:8,4:7:11.70:53,0,12	0/1:8,0:4:5.13:5,0,93	./.	0/0:8,0:3:2.94:0,3,56	0/0:8,0:6:15.05:0,15,383	0/0:4,1:3:6.02:0,6,103	0/0:7,0:5:2.96:0,3,118	0/0:7,0:2:3.01:0,3,47	0/1:10,0:7:34.62:35,0,83	./.	0/0:13,3:3:6.02:0,6,122	0/0:5,1:2:2.96:0,3,19	0/1:4,1:4:64.05:64,0,75	0/0:16,0:15:26.95:0,27,686	0/0:16,0:14:30.08:0,30,553	0/0:18,0:16:36.10:0,36,897	0/1:8,0:2:0:0,0,0	0/0:9,1:5:12.04:0,12,238	0/0:10,0:2:6.02:0,6,91	0/0:5,0:1:3.01:0,3,80
chr10	66951345	.	TA	T	568.97	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=3.903;DP=393;FS=19.356;HRun=4;HaplotypeScore=41.1721;InbreedingCoeff=0.8210;MQ=70.19;MQ0=0;MQRankSum=0.653;QD=25.86;ReadPosRankSum=0.544;VQSLOD=1.7282;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,16:16:48.15:576,48,0	1/1:1,5:6:9.03:107,9,0	0/0:12,0:12:32.64:0,33,402	0/0:7,0:7:12.91:0,13,202	0/0:22,0:22:57.17:0,57,761	0/0:20,0:20:57.15:0,57,747	0/0:6,0:6:15.03:0,15,189	0/0:39,0:39:99:0,102,1385	0/0:11,0:11:24.08:0,24,336	0/0:23,0:23:69.23:0,69,965	0/0:12,0:12:36.12:0,36,498	0/0:8,0:8:24.05:0,24,302	0/0:15,0:15:42.13:0,42,572	0/0:12,0:12:33.11:0,33,462	0/0:7,0:7:21.07:0,21,294	0/0:11,0:11:30.09:0,30,404	0/0:22,0:22:63.20:0,63,862	0/0:4,0:4:6.73:0,7,122	0/0:19,0:19:54.18:0,54,756	0/0:19,0:19:48.16:0,48,666	0/0:8,0:8:24.08:0,24,336	0/0:3,0:3:3.01:0,3,41	0/0:11,0:11:18.05:0,18,237	0/0:7,0:7:21.03:0,21,272	0/0:17,0:17:48.15:0,48,651	0/0:19,0:19:54.17:0,54,740	0/0:25,0:25:69.23:0,69,964	0/0:12,0:12:36.08:0,36,481
chr10	66953927	.	CT	C	5975.43	PASS	AB=0.579;AC=35;AF=0.625;AN=56;BaseQRankSum=8.337;DP=451;FS=0.861;HRun=10;HaplotypeScore=45.6329;InbreedingCoeff=0.9255;MQ=68.19;MQ0=3;MQRankSum=1.080;QD=19.98;ReadPosRankSum=2.818;VQSLOD=5.5699;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:93.72:0,94,1029	0/0:10,0:10:24.06:0,24,265	0/0:15,0:11:24.01:0,24,241	0/0:9,0:8:6.49:0,6,68	0/0:20,0:20:48.12:0,48,521	1/1:5,25:31:37.84:546,38,0	0/1:3,8:11:2.44:135,0,2	0/0:35,0:35:90.22:0,90,979	1/1:2,13:15:35.99:312,36,0	1/1:4,7:11:20.99:182,21,0	1/1:6,9:15:26.98:234,27,0	1/1:2,10:12:29.99:260,30,0	0/0:7,0:7:15.04:0,15,160	1/1:3,13:16:32.99:286,33,0	1/1:2,14:16:32.99:286,33,0	1/1:1,11:12:32.87:276,33,0	1/1:2,23:25:65.98:573,66,0	1/1:2,16:17:50.03:422,50,0	1/1:4,10:13:26.95:227,27,0	1/1:3,16:19:44.96:391,45,0	1/1:1,11:12:29.99:260,30,0	0/0:7,0:7:12.03:0,12,133	0/0:7,0:7:21.06:0,21,232	0/0:7,0:7:18.05:0,18,199	1/1:1,11:12:29.99:260,30,0	1/1:2,24:26:68.94:593,69,0	1/1:3,23:26:62.98:547,63,0	1/1:1,7:7:21:182,21,0
chr10	66954620	.	GTT	G	4538.12	PASS	AB=0.552;AC=35;AF=0.625;AN=56;BaseQRankSum=-0.776;DP=431;FS=19.123;HRun=14;HaplotypeScore=61.5831;InbreedingCoeff=0.8583;MQ=73.25;MQ0=1;MQRankSum=-1.700;QD=16.50;ReadPosRankSum=3.209;VQSLOD=2.1457;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:17:35.56:0,36,445	0/0:7,0:7:15.05:0,15,210	0/0:23,0:17:20.38:0,20,208	0/0:16,0:9:11.94:0,12,111	0/1:3,1:16:25.08:25,0,97	1/1:3,13:19:17.45:244,17,0	1/1:4,11:16:26.89:296,27,0	0/0:11,0:22:45.14:0,45,251	1/1:1,12:12:33.04:305,33,0	1/1:6,13:20:26.71:292,27,0	1/1:3,12:18:23.37:341,23,0	1/1:5,9:15:23.78:205,24,0	0/0:16,0:16:41.86:0,42,506	1/1:4,3:7:8.95:83,9,0	1/1:1,11:13:26.80:287,27,0	1/1:3,12:15:26.98:250,27,0	1/1:2,9:11:24:222,24,0	1/1:3,5:8:8.96:83,9,0	1/1:3,5:9:8.81:127,9,0	1/1:0,22:25:62.33:532,62,0	1/1:6,16:22:35.92:333,36,0	0/0:19,0:22:49.31:0,49,602	0/0:19,0:19:42.05:0,42,531	0/0:6,0:9:23.01:0,23,243	1/1:3,7:10:17.93:166,18,0	1/1:5,14:20:44.71:394,45,0	1/1:2,15:18:32.90:352,33,0	0/0:3,0:3:0:0,0,0
chr10	66954677	.	G	GTGCAGCATTTATGACATCTG	2540.80	PASS	AB=0.714;AC=21;AF=0.955;AN=22;BaseQRankSum=-0.630;DP=30;FS=3.882;HRun=0;HaplotypeScore=36.2067;InbreedingCoeff=-0.2116;MQ=188.53;MQ0=0;MQRankSum=-1.103;QD=90.74;ReadPosRankSum=0.473;VQSLOD=2.3134;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	1/1:7,1:11:23.67:1169,24,0	0/1:3,1:5:24.53:624,0,25	./.	./.	./.	1/1:2,0:2:6.02:191,6,0	./.	1/1:1,0:1:3.01:98,3,0	./.	./.	1/1:1,0:1:3.01:47,3,0	./.	./.	./.	1/1:1,0:1:2.99:23,3,0	./.	1/1:2,0:2:3.01:111,3,0	1/1:2,0:2:3.01:93,3,0	./.	1/1:1,0:1:3.01:94,3,0	1/1:1,0:1:3.01:73,3,0	./.	./.	1/1:1,0:1:3.01:97,3,0	./.	./.
chr10	66956897	.	A	AT	14324.94	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-8.325;DP=545;FS=3.457;HRun=0;HaplotypeScore=83.1086;InbreedingCoeff=0.9963;MQ=87.04;MQ0=0;MQRankSum=-8.135;QD=42.63;ReadPosRankSum=2.484;VQSLOD=5.4998;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:60.20:0,60,832	0/0:5,0:5:15.05:0,15,205	0/0:30,0:29:87.28:0,87,1171	0/0:33,0:33:55.39:0,55,907	0/0:23,0:23:60.20:0,60,838	1/1:0,27:27:72.25:1149,72,0	1/1:1,21:22:51.16:790,51,0	1/1:0,26:26:78.25:1217,78,0	1/1:0,13:13:33.11:527,33,0	1/1:2,22:24:66.19:1028,66,0	1/1:1,9:10:27.56:428,28,0	1/1:0,11:11:30.10:479,30,0	0/0:25,0:25:75.23:0,75,1030	1/1:0,8:9:27.09:431,27,0	1/1:2,20:22:57.19:906,57,0	1/1:2,13:15:39.09:594,39,0	1/1:0,16:16:45.15:718,45,0	1/1:1,7:8:23.11:331,23,0	1/1:1,19:20:60.20:950,60,0	1/1:0,21:21:63.21:1006,63,0	1/1:0,39:39:93.32:1485,93,0	0/0:17,0:17:51.16:0,51,693	0/0:20,0:20:57.19:0,57,797	0/0:34,0:34:93.27:0,93,1274	1/1:0,13:13:33.11:527,33,0	1/1:1,16:17:48.16:753,48,0	1/1:1,14:15:39.13:622,39,0	1/1:0,8:8:24.08:384,24,0
chr10	66956931	.	C	CCACACACACACACA	14240.42	PASS	AB=0.941;AC=43;AF=0.768;AN=56;BaseQRankSum=1.574;DP=666;FS=1.800;HRun=0;HaplotypeScore=288.3929;InbreedingCoeff=0.7168;MQ=58.53;MQ0=21;MQRankSum=-6.665;QD=30.49;ReadPosRankSum=-3.909;VQSLOD=3.3672;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:31:20.07:431,20,0	1/1:4,0:5:9.03:210,9,0	0/0:40,0:18:5.23:0,5,47	0/0:47,0:19:6.01:0,6,89	1/1:15,7:26:1.95:199,2,0	1/1:21,0:22:8.92:325,9,0	1/1:34,0:33:24.36:909,24,0	1/1:16,0:16:15.05:406,15,0	1/1:23,0:23:25.48:1067,25,0	0/1:30,0:32:13.86:1304,0,14	1/1:17,2:18:12.33:166,12,0	1/1:18,0:19:15.99:490,16,0	0/0:27,0:29:69.23:0,69,2361	1/1:9,4:14:18.49:837,18,0	1/1:24,1:30:24.07:1091,24,0	1/1:23,1:25:31.92:1363,32,0	1/1:19,0:19:18.03:515,18,0	1/1:11,0:10:10.41:405,10,0	1/1:15,0:15:21.07:616,21,0	1/1:23,0:23:2.82:155,3,0	1/1:36,0:36:17.14:362,17,0	0/0:19,0:19:27.07:0,27,838	0/0:23,0:25:45.11:0,45,1166	0/0:30,0:36:46.08:0,46,1722	1/1:12,0:13:14.45:442,14,0	1/1:24,0:25:51.17:1530,51,0	1/1:15,2:18:29.85:1371,30,0	1/1:5,0:5:3.01:48,3,0
chr10	66957756	.	TTTTCTTTC	T	7192.93	PASS	AB=1.000;AC=37;AF=0.661;AN=56;BaseQRankSum=3.153;DP=398;FS=5.223;HRun=0;HaplotypeScore=133.1195;InbreedingCoeff=0.7868;MQ=57.06;MQ0=6;MQRankSum=-6.618;QD=25.06;ReadPosRankSum=-0.943;VQSLOD=4.2124;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:24.02:0,24,358	0/0:5,0:5:12.04:0,12,305	0/0:9,0:6:10.59:0,11,219	0/0:12,0:7:11.52:0,12,86	0/0:33,0:35:84.23:0,84,1913	1/1:27,0:27:51.28:699,51,0	1/1:5,0:5:5.05:45,5,0	0/1:27,0:22:55.88:299,0,56	1/1:3,1:4:8.86:131,9,0	1/1:23,0:23:56.18:741,56,0	1/1:25,1:26:56.25:807,56,0	1/1:8,0:8:17.23:218,17,0	0/0:10,0:10:27.06:0,27,711	1/1:6,0:6:6.02:74,6,0	1/1:18,0:18:35.70:429,36,0	1/1:12,0:12:6.02:94,6,0	1/1:8,0:8:12.03:216,12,0	1/1:8,1:6:11.15:126,11,0	1/1:16,0:16:35.78:482,36,0	1/1:20,2:22:50.74:752,51,0	1/1:2,0:2:6:56,6,0	0/0:8,0:8:18.02:0,18,362	0/0:20,0:20:45.04:0,45,1337	0/0:2,0:2:6.02:0,6,167	1/1:19,1:19:53:627,53,0	1/1:21,1:22:55.29:713,55,0	1/1:22,1:23:52.77:611,53,0	1/1:9,0:9:5.91:72,6,0
chr10	66957765	.	TTTCTTTC	T	9160.21	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=2.607;DP=398;FS=7.496;HRun=0;HaplotypeScore=129.4984;InbreedingCoeff=0.8633;MQ=54.91;MQ0=6;MQRankSum=-7.053;QD=31.92;ReadPosRankSum=-1.657;VQSLOD=3.9856;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:27.93:0,28,298	0/0:5,0:5:12.04:0,12,271	0/0:11,0:5:13.46:0,13,207	0/0:13,0:7:14.33:0,14,100	0/0:33,0:33:84.22:0,84,1713	1/1:27,1:28:68.94:963,69,0	1/1:4,0:4:5.99:74,6,0	1/1:25,0:20:3.94:363,4,0	1/1:4,0:4:9.03:150,9,0	1/1:23,1:24:65.09:938,65,0	1/1:19,3:22:56.58:909,57,0	1/1:7,0:7:21.02:315,21,0	0/0:10,0:10:27.05:0,27,636	1/1:5,0:5:6.02:102,6,0	1/1:15,2:17:41.82:588,42,0	1/1:10,1:11:6.02:131,6,0	1/1:3,6:9:15.01:284,15,0	1/1:10,0:7:12.02:154,12,0	1/1:16,1:17:38.90:584,39,0	1/1:22,3:25:45.22:901,45,0	1/1:2,0:2:6:77,6,0	0/0:7,0:7:18.01:0,18,310	0/0:18,0:18:45.54:0,46,1219	0/0:4,0:4:11.07:0,11,229	1/1:23,0:22:65.48:828,65,0	1/1:24,1:25:54.70:846,55,0	1/1:24,1:25:61.17:848,61,0	1/1:3,1:4:6.01:104,6,0
chr10	66957766	.	TTCTTTC	T	10257.77	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=1.872;DP=386;FS=4.240;HRun=0;HaplotypeScore=115.9167;InbreedingCoeff=0.8780;MQ=54.86;MQ0=6;MQRankSum=-7.006;QD=37.17;ReadPosRankSum=-1.603;VQSLOD=4.0965;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:15.04:0,15,198	0/0:5,0:5:12.04:0,12,231	0/0:11,0:5:13.18:0,13,195	0/0:12,0:7:12.48:0,12,92	0/0:32,0:32:84.23:0,84,1553	1/1:26,1:27:80.28:1148,80,0	1/1:0,4:4:6.02:112,6,0	1/1:24,0:19:33.98:442,34,0	1/1:3,1:4:9.03:173,9,0	1/1:16,7:23:65.84:1158,66,0	1/1:20,1:21:56.40:908,56,0	1/1:6,1:7:21.03:348,21,0	0/0:10,0:10:27.04:0,27,570	1/1:1,4:5:6.02:145,6,0	1/1:15,1:16:42.12:725,42,0	1/1:1,10:11:6.02:138,6,0	1/1:9,0:9:15:246,15,0	1/1:8,0:5:12.04:210,12,0	1/1:15,1:16:35.49:586,35,0	1/1:22,2:24:41.35:890,41,0	1/1:2,0:2:6:77,6,0	0/0:7,0:7:17.96:0,18,267	0/0:18,0:18:48.92:0,49,1083	0/0:4,0:4:9.03:0,9,207	1/1:22,1:22:65.29:940,65,0	1/1:5,20:25:59.80:961,60,0	1/1:21,3:24:63.05:940,63,0	1/1:3,0:3:6.02:111,6,0
chr10	66957767	.	TCTTTC	T	9581.65	PASS	AB=1.000;AC=39;AF=0.696;AN=56;BaseQRankSum=3.085;DP=390;FS=6.837;HRun=0;HaplotypeScore=112.5406;InbreedingCoeff=0.8077;MQ=55.90;MQ0=6;MQRankSum=-7.601;QD=34.10;ReadPosRankSum=-0.687;VQSLOD=4.2619;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:6.72:0,7,177	0/0:5,0:5:12.04:0,12,211	0/0:13,0:6:12.37:0,12,176	0/0:11,0:6:6.46:0,6,85	0/0:32,0:32:84.07:0,84,1383	1/1:24,3:27:81.01:1189,81,0	1/1:4,0:4:6.02:99,6,0	1/1:24,0:20:49.02:553,49,0	1/1:4,0:4:9.03:143,9,0	1/1:22,1:23:65.93:1045,66,0	1/1:18,1:21:56.67:857,57,0	1/1:7,0:7:21.02:323,21,0	0/0:9,0:9:27.07:0,27,509	1/1:4,1:5:6.02:117,6,0	1/1:13,2:15:41.92:623,42,0	1/1:11,0:11:6.02:117,6,0	1/1:9,0:9:15.01:228,15,0	1/1:8,0:5:13.60:187,14,0	1/1:16,0:16:34.50:549,35,0	1/1:24,0:24:49.60:794,50,0	1/1:2,0:2:6:77,6,0	0/0:7,0:7:17.96:0,18,238	0/0:18,0:18:48.51:0,49,983	0/1:5,0:5:3.02:3,0,196	1/1:23,0:22:64.70:827,65,0	1/1:25,0:25:68.92:914,69,0	1/1:23,0:24:62.96:845,63,0	1/1:3,0:3:6.02:90,6,0
chr10	66957770	.	TTC	T	4537.99	PASS	AB=0.976;AC=41;AF=0.732;AN=56;BaseQRankSum=5.868;DP=392;FS=0.000;HRun=0;HaplotypeScore=111.1594;InbreedingCoeff=0.6830;MQ=56.69;MQ0=6;MQRankSum=-6.113;QD=14.73;ReadPosRankSum=-0.596;VQSLOD=4.3375;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:12,1:13:46.40:116,0,46	0/1:5,0:5:1.66:2,0,31	0/0:14,1:7:8.24:0,8,93	0/1:13,0:7:1.09:1,0,31	0/0:32,0:32:76.71:0,77,607	1/1:28,0:28:66.50:538,66,0	1/1:4,0:4:5.96:43,6,0	1/1:24,1:20:46.46:349,46,0	1/1:5,0:5:10.82:56,11,0	1/1:21,1:22:61.32:481,61,0	1/1:21,0:21:46.92:366,47,0	1/1:7,0:7:18.99:146,19,0	0/0:9,0:9:23.01:0,23,232	1/1:5,0:5:6:58,6,0	1/1:13,2:15:39.96:331,40,0	1/1:11,0:11:5.96:44,6,0	1/1:9,0:9:12.99:77,13,0	1/1:8,1:6:13.86:101,14,0	1/1:17,0:16:27.33:229,27,0	1/1:23,2:25:27.53:400,28,0	1/1:1,0:1:3:27,3,0	0/0:6,0:6:11.39:0,11,65	0/0:17,0:17:40.22:0,40,383	0/0:5,0:5:11.98:0,12,128	1/1:22,1:22:32.99:367,33,0	1/1:25,0:25:48.34:418,48,0	1/1:21,1:22:49.79:352,50,0	1/1:3,0:3:5.91:38,6,0
chr10	66957771	.	TC	T	4086	PASS	AB=0.978;AC=41;AF=0.732;AN=56;BaseQRankSum=6.468;DP=393;FS=6.506;HRun=1;HaplotypeScore=108.9971;InbreedingCoeff=0.5940;MQ=56.62;MQ0=6;MQRankSum=-6.878;QD=13.10;ReadPosRankSum=-0.229;VQSLOD=2.2842;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:15,0:15:68.91:69,0,82	0/0:5,0:5:10.66:0,11,57	0/0:15,0:7:9.26:0,9,80	0/1:13,1:7:17.31:17,0,23	0/0:30,0:30:67.46:0,67,454	1/1:26,1:27:72.02:514,72,0	1/1:4,0:4:5.89:37,6,0	1/1:26,0:21:53.93:396,54,0	1/1:4,1:5:8.99:35,9,0	1/1:23,0:23:58.40:392,58,0	1/1:21,2:23:58.67:368,59,0	1/1:7,0:7:20.71:153,21,0	0/0:8,0:8:22.88:0,23,189	1/1:5,0:5:5.85:36,6,0	1/1:15,0:15:39.55:237,40,0	1/1:11,0:11:5.67:28,6,0	1/1:9,0:9:13.90:74,14,0	1/1:9,0:6:15.69:100,16,0	1/1:17,0:16:29.27:244,29,0	1/1:25,0:25:39.11:326,39,0	1/1:1,0:1:3:27,3,0	0/0:5,0:5:1.03:0,1,22	0/0:18,0:18:30.50:0,31,257	0/1:5,0:5:3.05:3,0,97	1/1:22,0:21:36.64:322,37,0	1/1:24,1:25:58.65:400,59,0	1/1:20,1:21:43.11:286,43,0	1/1:3,0:3:5.02:20,5,0
chr10	66957773	.	T	TTTC	815	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=-4.274;DP=405;FS=3.987;HRun=0;HaplotypeScore=140.0821;InbreedingCoeff=0.3738;MQ=57.49;MQ0=6;MQRankSum=3.255;QD=16.30;ReadPosRankSum=-0.757;VQSLOD=3.1701;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:11.58:0,12,186	0/0:5,0:5:11.85:0,12,99	0/0:18,0:7:16.79:0,17,125	0/1:16,0:8:19.44:19,0,28	1/1:10,23:34:55.23:900,55,0	0/0:26,0:26:50.16:0,50,472	0/0:4,0:4:5.96:0,6,43	0/0:26,0:21:39.54:0,40,310	0/0:5,0:5:11.35:0,11,69	0/0:22,0:22:55.97:0,56,401	0/0:23,0:23:41.62:0,42,389	0/0:7,0:7:12.01:0,12,106	0/0:8,0:8:24:0,24,252	0/0:5,0:5:5.59:0,6,34	0/0:16,0:16:31.30:0,31,234	0/0:12,0:12:8.73:0,9,59	0/0:10,0:10:9.92:0,10,75	0/0:9,0:6:8.75:0,9,66	0/0:18,0:17:24.40:0,24,255	0/0:26,0:26:57.34:0,57,402	0/0:1,0:1:3:0,3,27	0/0:6,0:6:12.02:0,12,121	0/0:18,0:18:50.95:0,51,549	0/0:5,0:5:11.22:0,11,105	0/0:22,0:21:47.37:0,47,354	0/0:25,0:25:32.18:0,32,314	0/0:19,0:19:18.22:0,18,213	0/0:3,0:3:5.91:0,6,40
chr10	66957818	.	G	GTT	2721.18	PASS	AB=0.894;AC=35;AF=0.625;AN=56;BaseQRankSum=0.666;DP=410;FS=9.090;HRun=17;HaplotypeScore=116.4853;InbreedingCoeff=0.4481;MQ=69.03;MQ0=4;MQRankSum=-2.883;QD=8.58;ReadPosRankSum=-1.248;VQSLOD=0.5115;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:13,0:14:8.43:8,0,28	0/0:2,0:4:5.19:0,5,22	0/0:37,0:15:18.43:0,18,113	0/1:22,0:12:3.06:10,0,3	0/0:13,0:20:20.80:0,21,89	1/1:11,8:23:32.38:330,32,0	1/1:1,1:2:2.98:21,3,0	1/1:18,5:26:33.56:290,34,0	1/1:6,1:7:5.98:57,6,0	0/1:13,1:18:1.54:107,0,2	1/1:13,8:26:17.15:314,17,0	1/1:5,3:10:14.40:142,14,0	0/0:5,0:5:5.66:0,6,42	1/1:5,1:6:4.56:40,5,0	1/1:7,13:23:28.19:280,28,0	0/1:9,0:9:10.55:47,0,11	1/1:9,1:12:25.10:208,25,0	0/1:2,0:1:0:0,0,0	1/1:10,1:20:13.33:211,13,0	0/1:16,2:19:15.93:159,0,16	1/1:0,1:1:3.01:35,3,0	0/0:5,0:6:11.60:0,12,76	0/0:12,0:14:10.93:0,11,106	0/0:6,0:6:8.60:0,9,63	1/1:14,7:22:24.72:236,25,0	1/1:26,2:29:16.45:263,16,0	0/1:5,8:14:3.02:100,0,3	1/1:3,7:10:5.05:41,5,0
chr10	66961763	.	CAA	C	22945.15	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=14.381;DP=771;FS=0.606;HRun=3;HaplotypeScore=106.8241;InbreedingCoeff=0.9996;MQ=71.36;MQ0=1;MQRankSum=-1.801;QD=41.87;ReadPosRankSum=1.029;VQSLOD=4.3008;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,117,2261	0/0:11,0:11:33.11:0,33,632	0/0:24,0:24:69.23:0,69,1276	0/0:13,0:11:24.96:0,25,456	0/0:40,0:40:99:0,114,2190	1/1:0,18:18:51.17:781,51,0	1/1:0,24:24:69.23:1057,69,0	1/1:1,36:37:99:1472,99,0	1/1:1,25:26:63.21:965,63,0	1/1:0,26:26:78.26:1193,78,0	1/1:0,24:24:69.19:1030,69,0	1/1:1,26:27:72.24:1103,72,0	0/0:20,0:20:60.21:0,60,1159	1/1:0,30:30:81.28:1241,81,0	1/1:1,40:41:99:1700,111,0	1/1:1,30:31:78.26:1195,78,0	1/1:0,39:39:99:1700,111,0	1/1:0,27:28:84.29:1284,84,0	1/1:2,26:28:75.23:1103,75,0	1/1:1,31:32:90.31:1378,90,0	1/1:2,44:46:99:1838,120,0	0/0:19,0:19:54.19:0,54,1043	0/0:24,0:24:72.25:0,72,1382	0/0:32,0:32:96.29:0,96,1810	1/1:0,20:20:54.18:827,54,0	1/1:2,33:35:99:1516,99,0	1/1:1,25:26:72.24:1103,72,0	1/1:0,10:10:30.10:459,30,0
chr10	66962016	.	AACACACACACACAC	A	10402.80	PASS	AB=0.856;AC=35;AF=0.625;AN=56;BaseQRankSum=8.270;DP=504;FS=16.969;HRun=0;HaplotypeScore=191.5367;InbreedingCoeff=0.6773;MQ=63.00;MQ0=5;MQRankSum=-6.597;QD=30.51;ReadPosRankSum=1.381;VQSLOD=2.8858;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:41:12.59:13,0,657	0/0:7,0:10:11.46:0,11,77	0/0:27,0:17:3.01:0,3,70	0/0:28,0:23:3.01:0,3,96	0/0:16,0:16:33.11:0,33,1679	1/1:10,5:17:18.53:640,19,0	1/1:7,10:17:4.09:802,4,0	0/0:25,0:25:21.07:0,21,1001	1/1:5,10:15:22.25:938,22,0	1/1:6,11:18:33.11:1221,33,0	1/1:11,7:19:12.04:416,12,0	1/1:3,3:8:13.24:476,13,0	0/0:8,0:8:12.04:0,12,791	1/1:7,10:17:24.05:764,24,0	1/1:16,4:21:12.04:425,12,0	1/1:10,10:20:21.07:771,21,0	0/1:11,0:11:0:0,0,0	0/1:14,2:17:99:313,0,244	1/1:8,4:13:7.75:445,8,0	1/1:10,1:14:15.05:416,15,0	1/1:15,5:19:3.01:89,3,0	0/0:12,0:12:15.05:0,15,840	0/0:12,0:12:15.05:0,15,839	0/0:18,0:24:36.58:0,37,1869	1/1:12,9:23:24.08:805,24,0	1/1:17,8:25:29.58:635,30,0	1/1:7,10:18:23.82:882,24,0	1/1:4,3:7:9.03:353,9,0
chr10	66962849	.	GC	G	954.88	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=1.151;DP=627;FS=7.775;HRun=2;HaplotypeScore=120.7088;InbreedingCoeff=0.9995;MQ=66.21;MQ0=0;MQRankSum=-3.695;QD=31.83;ReadPosRankSum=-2.787;VQSLOD=1.8759;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,108,1617	0/0:18,0:18:54.14:0,54,784	0/0:15,0:15:45.15:0,45,665	0/0:15,0:15:39.13:0,39,571	0/0:28,0:28:81.27:0,81,1197	0/0:22,0:22:66.22:0,66,988	0/0:28,0:28:81.27:0,81,1212	1/1:3,27:30:81.26:1050,81,0	0/0:22,0:22:66.21:0,66,968	0/0:19,0:19:51.16:0,51,743	0/0:22,0:22:66.22:0,66,987	0/0:17,0:17:51.17:0,51,764	0/0:26,0:26:75.24:0,75,1099	0/0:21,0:21:57.18:0,57,832	0/0:21,0:21:63.21:0,63,943	0/0:14,0:14:42.14:0,42,630	0/0:31,0:31:93.30:0,93,1373	0/0:24,0:24:69.23:0,69,1032	0/0:14,0:14:39.12:0,39,565	0/0:21,0:21:63.21:0,63,943	0/0:42,0:42:99:0,126,1889	0/0:16,0:16:48.15:0,48,699	0/0:28,0:28:81.26:0,81,1194	0/0:16,0:16:48.15:0,48,698	0/0:21,0:21:63.19:0,63,920	0/0:11,0:11:33.11:0,33,478	0/0:26,0:26:78.25:0,78,1146	0/0:22,0:22:66.22:0,66,988
chr10	66962967	.	A	AT	8157.60	PASS	AB=0.909;AC=39;AF=0.696;AN=56;BaseQRankSum=-11.124;DP=551;FS=0.375;HRun=10;HaplotypeScore=60.1354;InbreedingCoeff=0.8757;MQ=67.72;MQ0=2;MQRankSum=-0.918;QD=21.08;ReadPosRankSum=2.359;VQSLOD=5.7784;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,104,843	0/0:12,0:12:32.95:0,33,268	0/0:20,0:13:26.35:0,26,182	0/0:20,1:12:14.80:0,15,97	1/1:5,1:32:74.81:435,75,0	1/1:2,16:18:42.11:448,42,0	1/1:5,11:16:23.73:256,24,0	0/0:11,0:36:51.97:0,52,150	1/1:4,9:13:21.05:224,21,0	1/1:5,15:20:47.97:486,48,0	1/1:1,18:19:54.10:563,54,0	1/1:3,13:16:22.39:367,22,0	0/0:12,0:12:26.93:0,27,219	1/1:0,14:14:36.09:382,36,0	1/1:1,14:15:39.10:416,39,0	1/1:1,3:5:8.89:79,9,0	1/1:3,18:21:57.13:602,57,0	1/1:5,14:19:8.44:295,8,0	1/1:6,18:25:23.56:511,24,0	1/1:5,28:33:53.55:774,54,0	1/1:1,10:11:27.07:288,27,0	0/0:10,0:10:17.94:0,18,145	0/1:17,2:20:4.75:5,0,362	0/0:16,0:16:41.94:0,42,345	1/1:4,23:27:1.44:630,1,0	1/1:4,19:23:54.12:567,54,0	1/1:7,21:28:63.16:670,63,0	1/1:6,6:12:15.04:160,15,0
chr10	66966853	.	T	TA	7158.90	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-8.950;DP=425;FS=0.000;HRun=10;HaplotypeScore=40.7245;InbreedingCoeff=0.9396;MQ=63.87;MQ0=3;MQRankSum=-1.026;QD=24.27;ReadPosRankSum=1.537;VQSLOD=5.1219;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:62.91:0,63,517	0/0:9,0:9:20.98:0,21,172	0/0:13,0:6:8.04:0,8,75	0/0:17,0:7:8.50:0,9,51	1/1:8,20:28:75.14:767,75,0	1/1:2,19:21:45.99:471,46,0	1/1:3,7:10:18.05:191,18,0	0/0:30,0:30:74.87:0,75,611	1/1:0,11:11:27.07:286,27,0	1/1:1,16:17:48.06:482,48,0	1/1:2,19:21:54.10:561,54,0	1/1:1,9:10:21.05:222,21,0	0/0:9,0:9:23.97:0,24,197	1/1:3,7:10:21.05:222,21,0	1/1:0,12:12:36.09:380,36,0	1/1:2,13:15:27.13:341,27,0	1/1:5,16:20:5.05:444,5,0	1/1:1,10:11:28.89:290,29,0	1/1:6,18:24:54.13:565,54,0	1/1:1,12:13:36.09:381,36,0	1/1:1,6:7:15.04:159,15,0	0/0:5,0:5:14.97:0,15,121	0/0:11,0:11:32.96:0,33,270	0/0:10,0:10:23.57:0,24,191	1/1:1,14:15:8.45:293,8,0	1/1:3,16:19:48.10:499,48,0	1/1:6,13:19:30.07:317,30,0	1/1:1,10:11:27.07:286,27,0
chr10	66966949	.	CAA	C	775.31	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.381;DP=569;FS=3.111;HRun=3;HaplotypeScore=67.9712;InbreedingCoeff=0.9986;MQ=91.93;MQ0=0;MQRankSum=-2.444;QD=27.69;ReadPosRankSum=0.763;VQSLOD=2.7322;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:81.24:0,81,1502	0/0:12,0:12:36.12:0,36,687	0/0:30,0:30:90.24:0,90,1557	0/0:19,0:19:51.07:0,51,836	1/1:2,26:28:63.14:870,63,0	0/0:20,0:20:57.20:0,57,1095	0/0:15,0:15:45.15:0,45,869	0/0:30,0:30:81.26:0,81,1472	0/0:11,0:11:33.11:0,33,637	0/0:23,0:23:66.22:0,66,1226	0/0:24,0:24:66.09:0,66,1275	0/0:15,0:15:45.15:0,45,870	0/0:11,0:11:33.11:0,33,638	0/0:18,0:18:51.17:0,51,974	0/0:15,0:15:45.15:0,45,869	0/0:12,0:12:36.12:0,36,680	0/0:33,0:33:99:0,99,1900	0/0:15,0:15:45.15:0,45,869	0/0:17,0:17:51.17:0,51,971	0/0:11,0:11:33.11:0,33,637	0/0:32,0:32:95.31:0,95,1764	0/0:14,0:14:39.13:0,39,753	0/0:21,0:21:63.22:0,63,1217	0/0:29,0:29:81.26:0,81,1492	0/0:24,0:24:69.24:0,69,1329	0/0:27,0:27:81.28:0,81,1551	0/0:25,0:25:75.25:0,75,1393	0/0:11,0:11:33.11:0,33,638
chr10	66970149	.	TTGTG	T	1111.26	PASS	AB=1.000;AC=9;AF=0.167;AN=54;BaseQRankSum=1.663;DP=786;FS=2.352;HRun=0;HaplotypeScore=180.3869;InbreedingCoeff=0.5312;MQ=60.56;MQ0=18;MQRankSum=1.517;QD=5.85;ReadPosRankSum=0.298;VQSLOD=2.5810;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:17,22:40:35.70:447,36,0	1/1:10,6:17:17.08:229,17,0	0/0:41,0:21:1.25:0,1,3	0/0:50,0:25:6.02:0,6,112	1/1:22,9:34:20.19:564,20,0	0/1:21,0:20:9.59:10,0,97	0/0:19,0:18:14.80:0,15,178	0/1:49,0:46:3.06:3,0,121	0/0:32,0:33:11.37:0,11,207	0/0:23,0:22:47.86:0,48,520	0/0:22,0:22:6.01:0,6,88	0/1:29,0:28:2.19:2,0,132	0/0:20,0:22:32.83:0,33,595	0/0:21,0:20:9.09:0,9,181	0/0:19,0:33:14.66:0,15,153	0/0:29,0:28:3.94:0,4,61	0/0:32,0:31:21.90:0,22,249	0/0:12,0:11:11.85:0,12,107	0/0:31,0:28:30.67:0,31,448	0/0:36,0:36:23.93:0,24,193	0/0:34,0:32:18:0,18,195	0/0:17,0:17:40.72:0,41,727	0/0:24,0:24:36.12:0,36,733	0/0:29,0:28:60.16:0,60,1319	0/0:29,0:28:3:0,3,65	0/0:29,0:29:44.09:0,44,553	0/0:21,0:20:17.11:0,17,325	./.
chr10	66970243	.	C	CTGTGTCTG	892.98	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.051;DP=829;FS=9.982;HRun=0;HaplotypeScore=228.8607;InbreedingCoeff=0.9761;MQ=57.16;MQ0=18;MQRankSum=-0.443;QD=37.21;ReadPosRankSum=-1.864;VQSLOD=1.8703;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:90.19:0,90,1967	0/0:11,0:11:18.06:0,18,459	0/0:39,0:20:36.08:0,36,653	0/0:62,0:30:42.54:0,43,608	1/1:19,5:24:38.84:988,39,0	0/0:21,0:21:48.15:0,48,1182	0/0:21,0:20:48.05:0,48,1007	0/0:40,0:38:81.23:0,81,1476	0/0:32,0:32:90.26:0,90,2044	0/0:32,0:30:72.24:0,72,1498	0/0:8,0:8:15.05:0,15,361	0/0:28,0:28:72.22:0,72,1771	0/0:25,0:25:66.19:0,66,1597	0/0:26,0:26:63.21:0,63,1555	0/0:31,0:30:69.16:0,69,1634	0/0:33,0:33:84.13:0,84,2035	0/0:34,0:33:75.98:0,76,1735	0/0:28,0:28:65.86:0,66,1615	0/0:26,0:24:44.60:0,45,823	0/0:18,0:18:48.14:0,48,973	0/0:67,0:66:99:0,138,3373	0/0:21,0:21:54.18:0,54,1251	0/0:24,0:24:65.85:0,66,1314	0/0:53,0:53:99:0,126,2920	0/0:13,0:13:33.11:0,33,875	0/0:39,0:38:96.28:0,96,2084	0/0:18,0:18:39.05:0,39,853	0/0:12,0:12:36.12:0,36,961
chr10	66970319	.	CTCTGTGTG	C	1166.28	PASS	AB=1.000;AC=6;AF=0.107;AN=56;BaseQRankSum=-0.724;DP=770;FS=2.683;HRun=0;HaplotypeScore=207.2874;InbreedingCoeff=0.6901;MQ=55.15;MQ0=18;MQRankSum=1.880;QD=11.00;ReadPosRankSum=0.599;VQSLOD=2.8007;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:37,3:40:79.30:875,79,0	1/1:0,11:13:5.74:94,6,0	0/0:28,0:9:21.79:0,22,171	0/0:35,0:15:29.11:0,29,213	0/1:27,0:27:0:0,0,0	0/0:22,0:22:42.48:0,42,1029	0/0:27,0:26:54.49:0,54,851	0/1:25,0:23:99:318,0,191	0/0:27,0:27:44.83:0,45,729	0/0:20,0:19:51.01:0,51,948	0/0:17,0:16:27.04:0,27,515	0/0:21,0:21:38.96:0,39,612	0/0:27,0:26:63.37:0,63,1078	0/0:19,0:18:32.62:0,33,490	0/0:32,0:32:50.97:0,51,1011	0/0:26,0:26:30.02:0,30,529	0/0:37,0:36:93.01:0,93,1448	0/0:24,0:23:40.53:0,41,625	0/0:21,0:19:53.88:0,54,979	0/0:26,0:25:48.56:0,49,1039	0/0:77,0:74:99:0,119,2358	0/0:21,0:21:36.07:0,36,808	0/0:26,0:26:68.86:0,69,1454	0/0:54,0:54:99:0,118,3339	0/0:12,0:12:20.98:0,21,314	0/0:36,0:36:99:0,102,1644	0/0:19,0:17:33.48:0,33,523	0/0:8,0:8:11.96:0,12,118
chr10	66970321	.	C	CTG	1555.53	PASS	AB=0.849;AC=30;AF=0.556;AN=54;BaseQRankSum=-0.902;DP=832;FS=1.497;HRun=0;HaplotypeScore=174.8761;InbreedingCoeff=-0.1525;MQ=54.50;MQ0=20;MQRankSum=-0.276;QD=2.43;ReadPosRankSum=-0.141;VQSLOD=2.3055;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:42:2.44:0,2,26	0/0:13,0:13:2.74:0,3,15	./.	0/1:33,0:15:0:0,0,0	1/1:28,0:28:0.47:1,0,0	1/1:24,1:25:14.95:140,15,0	0/1:23,6:29:10.36:125,0,10	1/1:25,0:23:3.41:19,3,0	0/1:20,10:30:12.65:61,0,13	0/1:25,0:24:8.25:108,0,8	0/1:16,3:20:17.38:38,0,17	0/1:14,8:23:34.76:35,0,56	0/0:28,0:27:11.73:0,12,103	1/1:11,6:16:6.02:88,6,0	0/1:29,4:34:29.37:29,0,97	0/1:16,13:30:33.20:57,0,33	0/1:31,8:40:35.15:182,0,35	0/1:19,6:25:33.40:77,0,33	0/1:19,4:21:54.78:125,0,55	0/1:28,0:28:46.82:83,0,47	0/1:60,18:75:95.91:96,0,154	0/0:23,0:24:14.95:0,15,124	0/1:28,1:29:20.14:20,0,171	0/0:50,0:53:68.57:0,69,616	1/1:11,5:18:3.01:44,3,0	1/1:28,12:42:26.08:251,26,0	1/1:19,4:21:9.45:108,9,0	1/1:8,0:8:2.99:24,3,0
chr10	66971158	.	C	CTT	846.82	PASS	AB=0.875;AC=4;AF=0.071;AN=56;BaseQRankSum=-2.556;DP=515;FS=0.689;HRun=10;HaplotypeScore=63.7416;InbreedingCoeff=0.4851;MQ=67.53;MQ0=8;MQRankSum=1.891;QD=12.64;ReadPosRankSum=-0.357;VQSLOD=1.1232;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:20:38.81:0,39,448	0/0:4,0:4:9.02:0,9,91	0/0:32,0:13:23.23:0,23,173	0/1:33,0:15:6.24:6,0,98	1/1:3,28:30:77.89:940,78,0	0/0:17,0:17:42.06:0,42,420	0/0:11,0:11:30.06:0,30,305	0/0:31,0:31:75.10:0,75,756	0/0:9,0:9:18.03:0,18,183	0/0:25,0:24:66.13:0,66,667	0/0:26,0:26:57.05:0,57,578	0/0:23,0:24:56.78:0,57,547	0/0:16,0:16:39.07:0,39,396	0/0:15,0:16:35.77:0,36,347	0/0:18,0:19:53.82:0,54,516	0/0:8,0:8:18.01:0,18,181	0/0:16,0:16:42.07:0,42,427	0/0:28,0:28:63.08:0,63,638	0/0:17,0:15:35.77:0,36,340	0/0:24,0:25:59.83:0,60,651	0/1:2,0:3:3.27:3,0,25	0/0:16,0:16:38.73:0,39,377	0/0:10,0:11:20.76:0,21,259	0/0:12,0:12:27.02:0,27,274	0/0:13,0:14:35.79:0,36,347	0/0:24,0:26:65.58:0,66,633	0/0:20,0:22:59.42:0,59,563	0/0:2,0:2:6.01:0,6,61
chr10	66971749	.	T	TG	1139.97	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-4.060;DP=698;FS=6.252;HRun=0;HaplotypeScore=63.0288;InbreedingCoeff=0.9954;MQ=83.92;MQ0=0;MQRankSum=-2.400;QD=39.31;ReadPosRankSum=-0.390;VQSLOD=3.7626;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,108,1486	0/0:10,0:10:30.08:0,30,398	0/0:23,0:23:69.14:0,69,876	0/0:19,0:19:53.02:0,53,660	1/1:0,29:29:81.21:1235,81,0	0/0:25,0:25:72.17:0,72,966	0/0:27,0:27:81.26:0,81,1116	0/0:29,0:29:87.28:0,87,1189	0/0:23,0:23:69.23:0,69,964	0/0:20,0:20:60.19:0,60,825	0/0:29,0:29:84.28:0,84,1163	0/0:14,0:14:42.14:0,42,586	0/0:30,0:30:90.29:0,90,1241	0/0:27,0:27:81.25:0,81,1100	0/0:43,0:43:99:0,129,1772	0/0:27,0:27:81.27:0,81,1131	0/0:24,0:24:72.22:0,72,988	0/0:7,0:7:21.02:0,21,270	0/0:29,0:29:84.27:0,84,1147	0/0:28,0:28:84.27:0,84,1157	0/0:35,0:35:99:0,105,1415	0/0:19,0:19:57.15:0,57,747	0/0:24,0:24:72.24:0,72,1006	0/0:27,0:27:78.26:0,78,1089	0/0:15,0:15:45.15:0,45,628	0/0:21,0:21:63.19:0,63,838	0/0:33,0:33:96.31:0,96,1325	0/0:23,0:23:69.23:0,69,964
chr10	66971853	.	T	TTC	1720.18	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-7.050;DP=687;FS=19.742;HRun=0;HaplotypeScore=75.2645;InbreedingCoeff=0.9978;MQ=87.08;MQ0=0;MQRankSum=-2.336;QD=49.15;ReadPosRankSum=2.094;VQSLOD=2.8663;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,99,1399	0/0:9,0:9:24.08:0,24,344	0/0:16,0:16:44.98:0,45,583	0/0:31,0:31:72.16:0,72,957	1/1:2,33:35:99:1815,99,0	0/0:26,0:26:72.24:0,72,1032	0/0:26,0:26:72.23:0,72,1016	0/0:31,0:31:90.29:0,90,1258	0/0:26,0:26:72.22:0,72,1013	0/0:34,0:34:93.31:0,93,1331	0/0:21,0:21:60.20:0,60,858	0/0:17,0:17:51.16:0,51,714	0/0:16,0:16:48.16:0,48,687	0/0:24,0:24:66.21:0,66,930	0/0:22,0:22:63.20:0,63,885	0/0:20,0:19:57.18:0,57,797	0/0:26,0:26:78.22:0,78,1076	0/0:13,0:13:39.13:0,39,558	0/0:23,0:23:60.20:0,60,857	0/0:30,0:30:87.28:0,87,1226	0/0:27,0:27:72.24:0,72,1032	0/0:30,0:30:87.28:0,87,1229	0/0:28,0:28:75.25:0,75,1074	0/0:13,0:13:39.13:0,39,559	0/0:24,0:24:69.23:0,69,989	0/0:33,0:33:90.30:0,90,1289	0/0:31,0:31:93.29:0,93,1293	0/0:21,0:21:60.20:0,60,858
chr10	66972640	.	TACACAC	T	4613.01	PASS	AB=0.771;AC=34;AF=0.607;AN=56;BaseQRankSum=7.774;DP=502;FS=16.816;HRun=0;HaplotypeScore=115.6820;InbreedingCoeff=0.4300;MQ=62.40;MQ0=6;MQRankSum=-5.853;QD=14.69;ReadPosRankSum=0.485;VQSLOD=3.0782;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:27:17.26:0,17,470	0/0:9,0:9:12.04:0,12,334	0/0:31,0:19:6:0,6,68	0/0:28,0:21:6.02:0,6,92	1/1:10,0:12:6.02:84,6,0	1/1:11,12:24:25.90:475,26,0	1/1:18,6:24:0.69:230,1,0	0/0:19,0:19:18.02:0,18,256	1/1:11,12:23:21.07:420,21,0	1/1:12,1:13:6.02:122,6,0	1/1:11,6:17:2.84:61,3,0	0/1:9,10:19:12.55:520,0,13	0/1:15,0:15:26.47:26,0,319	1/1:12,6:18:6.02:117,6,0	1/1:5,7:14:18.06:324,18,0	0/1:3,4:8:81.81:149,0,82	0/1:11,5:17:99:194,0,138	1/1:9,2:11:6.02:122,6,0	0/1:9,0:11:2.42:44,0,2	1/1:6,4:10:3.01:61,3,0	0/1:12,5:17:0:0,0,0	0/0:19,0:18:27.09:0,27,782	0/0:15,0:14:15.05:0,15,459	0/0:36,0:38:56.29:0,56,1388	1/1:10,7:17:18.06:366,18,0	1/1:10,9:21:34.26:580,34,0	1/1:6,11:18:33.11:653,33,0	1/1:3,2:5:3.01:61,3,0
chr10	66972877	.	AAG	A	327.93	PASS	AB=1.000;AC=30;AF=0.652;AN=46;BaseQRankSum=4.192;DP=456;FS=40.888;HRun=0;HaplotypeScore=67.0741;InbreedingCoeff=0.2608;MQ=56.35;MQ0=24;MQRankSum=-0.339;QD=1.39;ReadPosRankSum=4.065;VQSLOD=-0.5723;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:26:0.52:22,1,0	1/1:6,0:5:0.89:2,1,0	./.	./.	0/1:16,0:15:24.04:24,0,55	0/1:11,0:11:0:0,0,0	./.	0/0:23,0:23:6.75:0,7,37	1/1:10,0:10:4.61:18,5,0	0/0:14,0:13:1.25:0,1,3	./.	1/1:11,0:11:6.02:64,6,0	0/0:16,1:17:15.01:0,15,172	1/1:18,0:18:3.61:10,4,0	1/1:17,0:16:18.28:96,18,0	1/1:13,0:13:0.87:2,1,0	1/1:20,0:19:5.03:36,5,0	1/1:10,0:10:2.70:12,3,0	0/0:16,0:15:3:0,3,27	1/1:11,0:11:3.01:32,3,0	1/1:13,0:13:3:32,3,0	0/0:7,0:7:6.88:0,7,55	1/1:9,0:8:2.22:7,2,0	1/1:13,4:16:11.44:72,11,0	0/0:14,0:14:0.78:0,1,9	0/1:18,0:18:11.80:12,0,19	0/1:10,0:10:16.38:16,0,33	./.
chr10	66972917	.	GAGAGAGAGAAAGGA	G	2836.32	PASS	AB=1.000;AC=22;AF=0.407;AN=54;BaseQRankSum=8.453;DP=416;FS=51.977;HRun=0;HaplotypeScore=161.9497;InbreedingCoeff=-0.1061;MQ=42.37;MQ0=25;MQRankSum=-4.103;QD=10.47;ReadPosRankSum=2.907;VQSLOD=1.1343;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:25:11.52:0,12,206	1/1:10,0:9:6.02:108,6,0	./.	0/0:7,0:3:2.36:0,2,69	0/0:12,0:10:24.08:0,24,495	0/1:9,0:8:9.83:10,0,12	0/1:7,0:7:1.42:61,0,1	0/1:21,0:19:81.75:215,0,82	0/1:17,0:17:23.85:145,0,24	0/1:11,0:9:38.11:157,0,38	0/0:7,9:15:3.01:0,3,41	1/1:17,0:17:10.20:85,10,0	0/0:26,0:26:68.75:0,69,1808	0/1:19,0:19:99:103,0,106	1/1:19,1:19:27.93:455,28,0	0/1:18,0:17:99:193,0,125	0/1:15,0:13:37.39:203,0,37	0/1:9,0:9:7.52:8,0,146	0/1:13,0:11:99:106,0,132	0/1:15,0:13:31.53:144,0,32	0/0:9,0:9:5.81:0,6,54	0/0:13,0:12:32.19:0,32,918	0/0:14,0:13:29.89:0,30,765	0/0:18,0:16:26.63:0,27,454	0/1:27,0:25:55.58:122,0,56	0/1:20,0:20:99:441,0,226	0/1:17,0:17:99:179,0,132	1/1:6,0:5:15.05:269,15,0
chr10	66972921	.	GAGAGAAAGGA	G	3875.29	PASS	AB=0.915;AC=34;AF=0.607;AN=56;BaseQRankSum=5.627;DP=393;FS=5.740;HRun=0;HaplotypeScore=127.6003;InbreedingCoeff=0.3740;MQ=41.56;MQ0=24;MQRankSum=-3.212;QD=13.94;ReadPosRankSum=1.990;VQSLOD=1.7138;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:22:3.41:17,0,3	1/1:10,0:9:6.02:121,6,0	0/0:6,0:1:3.01:0,3,77	0/0:9,0:3:2.36:0,2,69	0/0:14,0:12:19.74:0,20,205	1/1:8,0:7:3.41:33,3,0	1/1:4,0:4:0.15:62,0,0	0/1:20,0:18:2.81:223,0,3	1/1:15,0:17:14.36:185,14,0	1/1:7,0:7:12.35:243,12,0	0/0:14,0:13:0:0,0,0	1/1:18,0:18:11.54:172,12,0	0/0:28,0:28:74.77:0,75,1727	0/1:14,0:16:24.75:136,0,25	1/1:15,0:18:29.11:438,29,0	1/1:14,0:13:11.93:270,12,0	0/1:11,0:10:6.85:208,0,7	1/1:6,0:7:1.26:33,1,0	0/1:12,0:9:22.22:185,0,22	1/1:8,7:13:15.05:228,15,0	1/1:9,0:9:3.01:57,3,0	0/0:13,0:12:32.16:0,32,786	0/0:13,0:12:29.72:0,30,657	0/0:18,0:16:19.81:0,20,387	1/1:22,0:22:15.03:170,15,0	1/1:19,0:19:19.61:576,20,0	0/1:9,8:17:83.17:249,0,83	1/1:6,0:5:15.05:267,15,0
chr10	66972923	.	GAGA	G	122.75	PASS	AB=0.904;AC=13;AF=0.241;AN=54;BaseQRankSum=2.475;DP=372;FS=12.981;HRun=0;HaplotypeScore=107.2289;InbreedingCoeff=0.1470;MQ=40.90;MQ0=23;MQRankSum=-0.134;QD=0.89;ReadPosRankSum=1.372;VQSLOD=1.4396;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:5.24:0,5,40	1/1:10,0:9:3.37:10,3,0	0/0:6,0:1:3.01:0,3,39	0/0:9,0:3:9.02:0,9,107	0/0:12,0:10:13.27:0,13,76	0/0:6,0:5:2.60:0,3,10	0/0:4,0:4:2.04:0,2,6	0/0:19,0:17:41.16:0,41,234	0/1:15,2:17:26.72:27,0,35	0/0:6,0:6:9.22:0,9,32	./.	0/1:15,0:17:7.14:7,0,14	0/0:29,0:29:77.52:0,78,1011	0/1:11,2:13:13.30:13,0,49	1/1:13,4:17:9.07:123,9,0	0/0:14,0:13:7.31:0,7,23	0/1:10,1:9:23.58:45,0,24	0/1:4,1:5:17.69:18,0,22	0/0:11,0:8:19.64:0,20,118	0/0:14,0:13:2.61:0,3,18	1/1:6,0:7:2.80:13,3,0	0/0:13,0:12:32.15:0,32,429	0/0:13,0:12:29.89:0,30,365	0/0:17,0:15:17.20:0,17,273	0/1:21,2:21:0.26:0,0,27	0/0:19,0:19:25.77:0,26,152	0/1:17,0:17:0.25:0,0,106	0/0:5,0:5:11.11:0,11,39
chr10	66972925	.	GAAAGGAAGGAAGGA	G	1166.49	PASS	AB=0.964;AC=10;AF=0.179;AN=56;BaseQRankSum=-1.062;DP=362;FS=0.000;HRun=0;HaplotypeScore=148.1004;InbreedingCoeff=0.3744;MQ=40.60;MQ0=24;MQRankSum=1.117;QD=11.44;ReadPosRankSum=1.552;VQSLOD=2.2983;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:18:6.52:48,7,0	1/1:1,9:9:6.02:237,6,0	0/0:6,0:1:3.01:0,3,171	0/0:9,0:3:2.38:0,2,147	0/1:10,0:9:47.90:48,0,210	0/0:6,0:5:9.03:0,9,163	0/0:4,0:4:5.97:0,6,45	1/1:5,15:18:38.89:941,39,0	0/0:17,0:17:32.57:0,33,688	0/0:6,0:6:12.83:0,13,123	0/0:13,0:12:12.04:0,12,247	0/0:8,0:17:6.12:0,6,386	0/0:29,0:29:74.93:0,75,3574	0/0:13,0:13:24.76:0,25,369	0/1:18,0:17:28.23:28,0,315	0/0:13,0:12:32.95:0,33,537	0/1:11,0:9:1.71:2,0,195	0/0:4,0:4:8.50:0,8,69	0/1:11,0:8:3.89:4,0,108	0/0:15,0:13:26.53:0,27,345	0/0:5,0:6:9:0,9,136	0/0:13,0:12:32.40:0,32,1500	0/0:13,0:12:29.82:0,30,1367	0/0:16,0:14:29.24:0,29,1076	0/0:23,0:21:43.43:0,43,747	0/0:15,0:15:23.72:0,24,378	0/0:17,0:17:26.68:0,27,531	0/0:5,0:5:8.40:0,8,71
chr10	66972929	.	GGA	G	1408.16	PASS	AB=0.797;AC=24;AF=0.429;AN=56;BaseQRankSum=5.019;DP=357;FS=0.912;HRun=0;HaplotypeScore=97.2240;InbreedingCoeff=-0.0126;MQ=40.39;MQ0=22;MQRankSum=-2.015;QD=6.40;ReadPosRankSum=4.188;VQSLOD=2.6910;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:17:3.69:0,4,14	1/1:10,0:9:6.01:60,6,0	0/0:8,0:2:6.02:0,6,120	0/0:12,0:4:9.86:0,10,118	0/0:10,0:8:16.67:0,17,156	1/1:3,2:4:1.18:3,1,0	1/1:3,1:4:0.15:38,0,0	0/1:18,0:16:7.46:22,0,7	0/1:2,15:17:26.09:39,0,26	0/1:7,0:6:0.05:158,0,0	0/0:11,3:13:0:0,0,0	0/1:10,7:17:18.47:18,0,62	0/0:28,0:28:77.88:0,78,1392	0/1:7,6:13:50.27:50,0,87	0/1:13,5:17:33.68:34,0,169	1/1:4,8:12:11.91:136,12,0	0/1:9,2:9:88.86:89,0,116	0/1:4,0:4:26.64:54,0,27	0/1:9,1:6:15.40:70,0,15	0/1:10,5:13:17.49:109,0,17	0/0:5,0:5:3.01:0,3,34	0/0:13,0:12:32.34:0,32,554	0/0:12,0:11:29.93:0,30,521	0/0:16,0:15:36.11:0,36,611	0/1:12,11:21:48.64:65,0,49	1/1:7,7:14:3.16:346,3,0	0/1:9,8:17:16.42:105,0,16	1/1:0,5:5:15.03:173,15,0
chr10	66972970	.	A	AAAAG	10923.34	PASS	AB=0.600;AC=37;AF=0.661;AN=56;BaseQRankSum=0.730;DP=430;FS=0.492;HRun=0;HaplotypeScore=85.2960;InbreedingCoeff=0.8559;MQ=54.16;MQ0=7;MQRankSum=-5.516;QD=40.76;ReadPosRankSum=3.085;VQSLOD=4.6712;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:51.08:0,51,786	0/0:9,0:9:8.99:0,9,122	0/0:18,0:9:12:0,12,135	0/0:29,0:9:18.17:0,18,219	1/1:6,0:6:13.29:82,13,0	1/1:2,4:6:3.01:75,3,0	1/1:1,5:6:12.04:301,12,0	0/0:33,0:33:60.12:0,60,847	1/1:6,10:16:42.01:841,42,0	1/1:3,8:11:24.07:489,24,0	1/1:13,6:19:42.07:866,42,0	1/1:6,10:16:36.12:873,36,0	0/0:23,0:23:66.18:0,66,1039	1/1:4,7:11:21:448,21,0	1/1:3,12:16:24.07:551,24,0	1/1:5,12:19:35.95:731,36,0	1/1:4,10:16:15.01:316,15,0	0/1:2,4:6:9.27:129,0,9	1/1:2,12:16:45.12:862,45,0	1/1:7,5:12:24.08:570,24,0	1/1:1,3:4:6.02:150,6,0	0/0:8,0:7:15.02:0,15,221	0/0:10,0:10:21.05:0,21,294	0/0:9,0:9:24.01:0,24,366	1/1:8,22:31:44.95:931,45,0	1/1:2,20:22:60.20:1278,60,0	1/1:10,10:20:51.16:1142,51,0	1/1:10,2:11:18.03:289,18,0
chr10	66973062	.	G	GTGT	708.63	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.467;DP=366;FS=8.481;HRun=0;HaplotypeScore=52.8023;InbreedingCoeff=0.7534;MQ=69.43;MQ0=0;MQRankSum=-0.284;QD=54.51;ReadPosRankSum=3.031;VQSLOD=5.6510;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:93.28:0,93,1448	0/0:9,0:9:27.09:0,27,441	0/0:10,0:10:29.35:0,29,373	0/0:18,0:16:47.34:0,47,658	1/1:1,12:13:36.12:803,36,0	0/0:16,0:16:45.14:0,45,710	0/0:12,0:12:36.11:0,36,564	0/0:24,0:24:69.22:0,69,1081	0/0:6,0:6:15.05:0,15,245	0/0:8,0:8:21.06:0,21,321	0/0:13,0:13:33.10:0,33,508	0/0:5,0:5:15.05:0,15,233	0/0:10,0:10:30.10:0,30,490	0/0:9,0:9:20.92:0,21,268	0/0:5,0:5:9.03:0,9,147	0/0:12,0:12:24.08:0,24,392	0/0:28,0:28:75.26:0,75,1219	0/0:14,0:14:42.14:0,42,686	0/0:20,0:20:57.19:0,57,904	0/0:16,0:16:48.16:0,48,783	0/0:20,0:20:60.17:0,60,908	0/0:2,0:2:6.02:0,6,98	0/0:9,0:9:18.06:0,18,294	0/0:2,0:2:6.02:0,6,98	0/0:17,0:17:39.13:0,39,636	0/0:14,0:14:42.14:0,42,686	0/0:9,0:9:27.07:0,27,404	0/0:11,0:11:33.08:0,33,478
chr10	66973796	.	ATTCTTTCTTTCT	A	10536.51	PASS	AB=0.543;AC=38;AF=0.704;AN=54;BaseQRankSum=6.636;DP=650;FS=14.892;HRun=0;HaplotypeScore=176.9381;InbreedingCoeff=0.5787;MQ=60.91;MQ0=5;MQRankSum=-2.914;QD=20.18;ReadPosRankSum=0.350;VQSLOD=2.9781;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:3,29:33:22.91:208,0,23	1/1:0,8:8:9.03:255,9,0	0/0:18,0:15:39.60:0,40,1082	0/0:9,0:7:15.05:0,15,413	1/1:21,0:21:7.58:161,8,0	1/1:1,0:22:21.01:192,21,0	./.	1/1:6,0:27:3.54:383,4,0	1/1:5,0:27:20.90:173,21,0	1/1:7,0:31:76.41:1266,76,0	0/1:4,0:23:23.91:111,0,24	1/1:3,0:16:15:135,15,0	0/0:19,0:19:39.13:0,39,1520	1/1:5,0:32:11.93:92,12,0	1/1:3,29:32:27.09:937,27,0	1/1:1,21:22:12.04:435,12,0	1/1:2,25:27:15.05:546,15,0	0/1:4,0:17:3.94:131,0,4	1/1:2,13:15:39.11:773,39,0	1/1:2,30:32:24.34:525,24,0	1/1:14,0:14:12.04:365,12,0	0/0:14,0:14:30.10:0,30,1333	0/0:23,0:23:66.21:0,66,2586	0/0:21,0:21:5.36:0,5,2438	0/1:4,0:30:49.07:49,0,207	1/1:2,25:27:75.20:1823,75,0	1/1:6,42:48:26.61:983,27,0	1/1:16,0:16:34.16:992,34,0
chr10	66973797	.	TTCTTTCTTTCTTTCTTTCTA	T	1903.08	PASS	AB=1.000;AC=8;AF=0.143;AN=56;BaseQRankSum=0.178;DP=645;FS=4.312;HRun=0;HaplotypeScore=267.8610;InbreedingCoeff=0.0968;MQ=60.92;MQ0=5;MQRankSum=2.487;QD=12.36;ReadPosRankSum=4.888;VQSLOD=1.9571;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:34,0:34:12.81:13,0,249	0/0:8,0:8:14.92:0,15,152	0/0:18,0:15:42.61:0,43,1499	0/0:9,0:7:18.06:0,18,555	1/1:0,20:20:12.04:455,12,0	0/0:22,0:22:21.07:0,21,606	0/0:24,0:24:8.94:0,9,67	0/0:29,0:27:37.85:0,38,393	0/0:27,0:27:22.80:0,23,499	0/1:30,0:30:99:423,0,852	0/0:22,0:22:52.33:0,52,798	0/0:16,0:16:14.16:0,14,289	0/0:19,0:19:42.13:0,42,2363	0/0:32,0:32:23.07:0,23,386	0/0:32,0:32:29.94:0,30,278	0/0:22,0:22:11.96:0,12,93	0/0:27,0:27:14.94:0,15,114	0/0:17,0:17:19.30:0,19,391	0/1:15,0:15:99:299,0,127	0/0:32,0:32:33.70:0,34,592	0/1:13,0:13:68.06:68,0,120	0/0:14,0:14:33.11:0,33,2099	0/0:23,0:23:69.23:0,69,4035	0/0:21,0:21:43.03:0,43,3817	0/0:30,0:30:36.07:0,36,1349	0/1:26,0:26:99:399,0,299	0/0:47,0:46:38.84:0,39,308	0/1:16,0:16:92.40:385,0,92
chr10	66973813	.	T	TTCTA	751.92	PASS	AB=1.000;AC=13;AF=0.271;AN=48;BaseQRankSum=-5.126;DP=649;FS=5.593;HRun=0;HaplotypeScore=156.1493;InbreedingCoeff=0.1553;MQ=57.62;MQ0=9;MQRankSum=1.809;QD=3.17;ReadPosRankSum=-4.745;VQSLOD=0.6497;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:38:14:0,14,106	0/0:9,0:9:11.94:0,12,95	./.	./.	0/0:20,0:20:1.78:0,2,4	0/1:25,0:25:41.24:57,0,41	1/1:23,0:23:2.94:18,3,0	./.	0/1:26,0:25:11.05:75,0,11	0/1:28,0:28:15.36:117,0,15	1/1:24,0:24:6.97:153,7,0	0/1:15,0:15:19.51:36,0,20	1/1:5,12:17:15.05:349,15,0	0/1:30,0:30:14.59:69,0,15	0/0:30,0:30:27.01:0,27,264	0/0:23,0:23:13.83:0,14,119	0/0:28,0:28:3.06:0,3,166	0/1:16,0:16:5.36:5,0,28	0/0:15,0:15:6:0,6,56	0/0:30,0:30:14.93:0,15,123	0/0:15,0:15:9:0,9,80	0/0:10,0:10:12.04:0,12,183	0/0:26,0:25:36.07:0,36,453	0/0:26,0:26:19.67:0,20,496	0/1:33,0:32:17.33:17,0,64	0/0:32,0:32:40.91:0,41,344	0/0:44,0:43:29.98:0,30,305	./.
chr10	66977174	.	A	ACTCAGAGAC	38427.48	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=-10.478;DP=576;FS=3.365;HRun=0;HaplotypeScore=135.9491;InbreedingCoeff=0.9862;MQ=69.66;MQ0=0;MQRankSum=-16.303;QD=93.95;ReadPosRankSum=4.153;VQSLOD=5.0974;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,16:35:60.16:2698,60,0	1/1:2,8:14:30.10:1459,30,0	0/0:28,0:25:59.39:0,59,1779	0/0:24,0:24:69.22:0,69,1951	1/1:6,5:17:12.04:542,12,0	1/1:3,8:12:21.07:969,21,0	1/1:6,18:30:63.22:2967,63,0	0/0:35,0:35:96.31:0,96,2702	1/1:1,11:13:30.10:1465,30,0	1/1:2,10:23:51.01:2132,51,0	1/1:6,6:14:24.08:1076,24,0	1/1:4,21:33:81.28:3739,81,0	0/0:22,0:22:66.21:0,66,1970	1/1:2,16:23:57.20:2717,57,0	1/1:4,18:25:63.21:2904,63,0	1/1:3,15:23:54.19:2580,54,0	1/1:5,7:15:30.10:1294,30,0	1/1:6,8:15:36.12:1734,36,0	1/1:5,4:15:36.07:1269,36,0	1/1:4,9:17:27.09:1254,27,0	1/1:9,12:26:45.63:2059,46,0	0/0:12,0:12:30.10:0,30,808	0/0:10,0:10:27.09:0,27,821	0/0:36,0:36:99:0,105,3145	1/1:2,5:10:12.04:585,12,0	1/1:10,9:23:57.17:2383,57,0	1/1:3,10:17:33.10:1575,33,0	1/1:2,6:8:21.07:1027,21,0
chr10	66977176	.	T	TC	1893.36	PASS	AB=0.972;AC=31;AF=0.554;AN=56;BaseQRankSum=15.187;DP=549;FS=5.874;HRun=1;HaplotypeScore=192.8774;InbreedingCoeff=0.2192;MQ=74.03;MQ0=0;MQRankSum=-16.227;QD=5.02;ReadPosRankSum=9.087;VQSLOD=0.0295;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:32,0:32:10.19:98,0,10	1/1:12,0:12:4.28:76,4,0	0/0:29,0:27:54.58:0,55,945	0/0:25,0:25:69.18:0,69,904	0/1:19,0:19:8.33:8,0,68	0/1:11,0:11:21.43:47,0,21	1/1:25,1:26:48.28:200,48,0	0/0:36,0:36:96.31:0,96,1327	1/1:12,1:13:4.95:87,5,0	0/1:20,1:21:30.64:79,0,31	0/1:12,1:13:1.66:39,0,2	1/1:31,0:31:59.02:243,59,0	0/0:22,0:22:66.21:0,66,902	1/1:25,1:26:48.50:204,49,0	1/1:22,0:22:45.89:208,46,0	1/1:21,0:21:40.34:170,40,0	1/1:11,0:11:18.11:72,18,0	1/1:12,0:12:26.78:111,27,0	0/1:12,0:12:20.71:21,0,181	0/1:15,0:15:52.64:53,0,62	1/1:19,0:20:21.76:116,22,0	0/0:12,0:12:33.11:0,33,455	0/0:12,0:12:30.01:0,30,397	0/0:36,0:36:99:0,108,1508	0/1:11,0:11:12.17:30,0,12	0/1:18,1:19:59.93:72,0,60	0/1:19,1:19:23.70:93,0,24	0/1:9,1:10:15.47:60,0,15
chr10	66977177	.	A	AGAGACCTC	18472.06	PASS	AB=0.992;AC=36;AF=0.643;AN=56;BaseQRankSum=14.671;DP=572;FS=2.173;HRun=0;HaplotypeScore=191.4754;InbreedingCoeff=0.5287;MQ=74.15;MQ0=0;MQRankSum=-16.533;QD=46.53;ReadPosRankSum=6.889;VQSLOD=4.1616;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:36,0:36:48.15:1199,48,0	1/1:12,0:12:28.34:724,28,0	0/0:28,0:27:72.14:0,72,1857	0/0:26,0:26:69.23:0,69,1963	0/1:20,0:20:28.94:283,0,29	0/1:11,0:11:2.93:462,0,3	1/1:29,1:30:54.19:1484,54,0	0/0:35,0:35:93.31:0,93,2651	1/1:12,1:13:8.11:801,8,0	1/1:21,1:22:14.18:1078,14,0	1/1:12,1:13:21.06:517,21,0	1/1:31,0:31:71.05:1879,71,0	0/0:22,0:22:63.22:0,63,1886	1/1:26,1:27:57.15:1509,57,0	1/1:23,0:23:58.08:1508,58,0	1/1:21,0:21:44.92:1208,45,0	1/1:12,0:12:18.06:487,18,0	1/1:13,0:13:30.10:790,30,0	0/1:13,0:13:21.85:517,0,22	0/1:18,0:18:5.89:591,0,6	1/1:20,0:20:24.78:699,25,0	0/0:13,0:13:33.03:0,33,759	0/0:13,0:13:8.16:0,8,783	0/0:38,0:38:99:0,108,3116	0/1:12,0:12:9.95:307,0,10	1/1:19,1:20:20.75:945,21,0	0/1:19,1:19:28.84:926,0,29	1/1:9,1:10:3.08:557,3,0
chr10	66979490	.	T	TTCACACACACACAC	3047.58	PASS	AB=0.980;AC=19;AF=0.339;AN=56;BaseQRankSum=1.731;DP=558;FS=6.789;HRun=0;HaplotypeScore=184.5768;InbreedingCoeff=-0.3690;MQ=72.97;MQ0=10;MQRankSum=-4.390;QD=9.96;ReadPosRankSum=-2.947;VQSLOD=1.6398;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:32:0.85:1,0,226	0/1:10,0:10:34.98:50,0,35	0/0:50,0:27:35.92:0,36,381	0/0:30,0:21:35.27:0,35,430	0/0:18,0:18:8.61:0,9,71	0/1:7,4:14:39.89:173,0,40	0/1:25,0:25:55.78:89,0,56	0/0:22,0:22:33.91:0,34,324	0/1:17,0:17:75.81:525,0,76	0/1:19,0:19:99:364,0,154	0/1:13,0:13:62.80:63,0,124	0/1:17,0:17:40.90:173,0,41	0/0:21,0:21:48.04:0,48,1188	0/0:11,0:11:11.98:0,12,99	0/1:23,0:23:99:228,0,148	0/1:20,0:20:60.04:289,0,60	0/1:15,0:15:14.07:14,0,18	0/1:6,0:5:13.95:354,0,14	0/1:20,0:20:95.82:308,0,96	0/0:16,0:16:17.97:0,18,148	0/1:23,0:22:24.13:24,0,161	0/0:27,0:27:72.06:0,72,1637	0/0:19,0:19:39.12:0,39,1424	0/0:38,0:38:92.80:0,93,2485	0/1:13,0:13:8.99:9,0,86	0/1:15,0:15:52.85:375,0,53	0/1:18,0:18:95.60:96,0,161	1/1:5,0:5:3.01:71,3,0
chr10	66979491	.	T	TCACACACACACACA	8667.61	PASS	AB=0.878;AC=41;AF=0.759;AN=54;BaseQRankSum=-2.738;DP=693;FS=3.975;HRun=0;HaplotypeScore=246.4027;InbreedingCoeff=0.5271;MQ=65.47;MQ0=10;MQRankSum=-4.949;QD=17.00;ReadPosRankSum=-3.926;VQSLOD=2.9630;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:19,0:44:5.52:122,0,6	1/1:10,0:10:12.03:163,12,0	0/0:49,0:25:2.88:0,3,15	./.	0/1:24,0:24:0.09:0,0,1	1/1:23,0:23:7.36:520,7,0	1/1:32,0:32:21.41:331,21,0	1/1:22,0:22:18:214,18,0	1/1:11,10:22:9.03:601,9,0	1/1:26,0:25:36.06:1126,36,0	1/1:14,0:14:9.01:159,9,0	1/1:14,11:26:3.48:201,3,0	0/0:20,0:20:27.09:0,27,935	1/1:16,0:23:2.75:99,3,0	1/1:24,7:36:11.69:555,12,0	1/1:18,9:29:17.99:890,18,0	1/1:21,0:21:6.49:156,6,0	1/1:5,2:7:9.03:602,9,0	1/1:16,6:22:25.81:691,26,0	1/1:16,10:27:0.84:139,1,0	0/1:28,0:27:53.61:65,0,54	0/0:28,0:28:33.11:0,33,1263	0/0:17,0:18:36.12:0,36,1326	0/0:34,0:38:57.08:0,57,2119	1/1:22,0:20:6.02:249,6,0	1/1:12,0:25:38.75:1354,39,0	1/1:12,8:20:6.02:341,6,0	1/1:5,0:5:3.01:90,3,0
chr10	66979727	.	G	GAGCTTGCTGGAA	3569.25	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-4.983;DP=742;FS=5.675;HRun=0;HaplotypeScore=243.6222;InbreedingCoeff=0.9984;MQ=75.93;MQ0=0;MQRankSum=-6.860;QD=108.16;ReadPosRankSum=0.148;VQSLOD=3.1639;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,99,3280	0/0:11,0:11:33.11:0,33,1153	0/0:17,0:17:39.06:0,39,1007	0/0:14,0:14:27.03:0,27,703	1/1:4,18:33:63.15:3569,63,0	0/0:23,0:23:63.19:0,63,2169	0/0:30,0:30:87.30:0,87,3116	0/0:40,0:40:99:0,117,3657	0/0:34,0:34:96.33:0,96,3363	0/0:25,0:25:69.23:0,69,2370	0/0:24,0:24:69.24:0,69,2424	0/0:35,0:35:96.26:0,96,3231	0/0:18,0:18:54.19:0,54,1974	0/0:35,0:35:96.31:0,96,3267	0/0:26,0:26:75.18:0,75,2403	0/0:30,0:30:84.27:0,84,2707	0/0:20,0:20:57.20:0,57,1901	0/0:18,0:18:54.18:0,54,1783	0/0:27,0:27:75.23:0,75,2188	0/0:39,0:39:99:0,111,3738	0/0:30,0:30:87.30:0,87,3029	0/0:33,0:33:93.29:0,93,2984	0/0:25,0:25:75.24:0,75,2612	0/0:19,0:19:54.19:0,54,1908	0/0:20,0:20:60.19:0,60,1999	0/0:32,0:32:96.30:0,96,3111	0/0:36,0:36:99:0,108,3658	0/0:12,0:12:33.11:0,33,1242
chr10	66979849	.	GA	G	732.86	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=8.128;DP=813;FS=6.677;HRun=4;HaplotypeScore=83.3270;InbreedingCoeff=0.9980;MQ=89.08;MQ0=0;MQRankSum=-2.982;QD=28.19;ReadPosRankSum=-0.310;VQSLOD=3.0326;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,141,1954	0/0:8,0:8:24.08:0,24,336	0/0:31,0:31:71.79:0,72,1073	0/0:30,0:30:81.08:0,81,1059	1/1:0,26:26:69.21:828,69,0	0/0:27,0:27:78.26:0,78,1092	0/0:24,0:24:69.21:0,69,946	0/0:33,0:33:99:0,99,1369	0/0:38,0:38:99:0,111,1554	0/0:40,0:40:99:0,111,1545	0/0:19,0:19:51.17:0,51,714	0/0:27,0:27:75.25:0,75,1050	0/0:35,0:35:99:0,102,1427	0/0:28,0:28:81.27:0,81,1126	0/0:35,0:35:99:0,102,1429	0/0:28,0:28:78.26:0,78,1092	0/0:23,0:23:69.20:0,69,945	0/0:19,0:19:48.14:0,48,651	0/0:20,0:20:60.20:0,60,839	0/0:35,0:35:96.19:0,96,1278	0/0:48,0:48:99:0,141,1904	0/0:34,0:34:96.30:0,96,1306	0/0:24,0:24:72.24:0,72,996	0/0:27,0:27:75.22:0,75,1016	0/0:24,0:24:72.24:0,72,1008	0/0:33,0:33:90.28:0,90,1229	0/0:32,0:32:96.31:0,96,1327	0/0:16,0:16:45.06:0,45,523
chr10	66981902	.	CCACATGACAGGCTATACTTCCTAGGCCTGTGACCA	C	1502.17	PASS	AB=1.000;AC=31;AF=0.596;AN=52;BaseQRankSum=-2.065;DP=548;FS=18.106;HRun=0;HaplotypeScore=443.5877;InbreedingCoeff=0.6269;MQ=77.25;MQ0=0;MQRankSum=-1.695;QD=6.13;ReadPosRankSum=2.618;VQSLOD=0.5509;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:96.33:0,96,10434	0/0:10,0:10:12.04:0,12,1548	0/0:25,0:25:9.03:0,9,352	0/0:32,0:32:27.09:0,27,1181	0/0:33,0:33:66.23:0,66,7666	1/1:18,0:18:3.01:128,3,0	1/1:9,0:9:3.01:44,3,0	0/0:24,0:24:21.07:0,21,892	1/1:17,0:17:5.99:101,6,0	1/1:15,0:15:6.02:177,6,0	1/1:19,0:19:9.03:139,9,0	1/1:10,0:10:6.02:183,6,0	0/0:21,0:21:33.11:0,33,3735	./.	1/1:19,0:19:3.01:43,3,0	1/1:9,0:9:2.97:20,3,0	1/1:14,0:13:3.01:48,3,0	1/1:12,0:12:2.99:23,3,0	1/1:18,0:18:3.01:72,3,0	1/1:17,0:17:3.01:79,3,0	0/1:25,0:25:0:1,0,0	0/0:23,0:23:42.14:0,42,4672	0/0:19,0:19:39.13:0,39,3932	0/0:36,0:35:87.30:0,87,9308	1/1:11,8:19:3.01:252,3,0	./.	1/1:21,0:20:4.26:102,4,0	1/1:2,1:3:3.01:264,3,0
chr10	66981937	.	A	AGC	5801.05	PASS	AB=0.930;AC=28;AF=0.500;AN=56;BaseQRankSum=11.379;DP=547;FS=3.294;HRun=0;HaplotypeScore=172.9033;InbreedingCoeff=0.3998;MQ=66.32;MQ0=1;MQRankSum=-12.963;QD=23.02;ReadPosRankSum=-4.834;VQSLOD=4.2964;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,156,2486	0/0:7,0:7:21.07:0,21,343	0/0:35,0:35:99:0,102,1603	0/0:29,0:29:76.39:0,76,1157	0/0:32,0:32:93.32:0,93,1514	1/1:8,2:11:17.16:311,17,0	0/1:11,2:14:10.09:282,0,10	0/0:31,0:31:90.30:0,90,1429	0/1:11,1:12:11.37:261,0,11	0/1:10,5:15:70.78:376,0,71	0/1:16,1:16:22.63:164,0,23	1/1:11,1:13:5.38:292,5,0	0/0:18,0:18:54.18:0,54,879	1/1:9,1:10:8.23:184,8,0	1/1:12,0:12:4.07:348,4,0	0/1:6,0:6:4.44:249,0,4	1/1:9,1:9:0.50:272,1,0	0/1:9,0:9:12.89:151,0,13	1/1:9,0:9:9.81:286,10,0	1/1:13,2:15:18.23:358,18,0	1/1:20,3:23:13.15:581,13,0	0/0:23,0:23:69.24:0,69,1126	0/0:22,0:22:66.23:0,66,1070	0/0:45,0:44:99:0,132,2152	1/1:26,0:26:14.45:647,14,0	0/1:14,0:14:7.33:251,0,7	1/1:29,0:28:19.46:689,19,0	0/1:4,0:4:3.62:99,0,4
chr10	66981938	.	C	CGT	757.03	PASS	AB=0.944;AC=18;AF=0.321;AN=56;BaseQRankSum=10.749;DP=471;FS=9.838;HRun=0;HaplotypeScore=120.5928;InbreedingCoeff=0.2098;MQ=70.75;MQ0=1;MQRankSum=-9.956;QD=5.57;ReadPosRankSum=-3.793;VQSLOD=1.4949;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,151,2440	0/0:7,0:7:21.07:0,21,343	0/0:34,0:34:99:0,99,1584	0/0:31,0:31:76.80:0,77,1175	0/0:32,0:32:93.32:0,93,1514	0/1:7,1:8:4.53:55,0,5	0/1:9,0:9:7.67:46,0,8	0/0:32,0:32:90.30:0,90,1442	0/1:6,1:7:4.59:69,0,5	0/1:9,1:10:66.51:67,0,91	1/1:11,0:10:15.76:137,16,0	0/1:9,1:9:5.79:104,0,6	0/0:18,0:18:54.18:0,54,881	0/0:5,0:5:1.34:0,1,54	0/1:7,0:7:32.33:39,0,32	0/1:6,0:6:19.25:19,0,28	1/1:6,0:5:6.84:58,7,0	1/1:5,0:6:5.17:29,5,0	0/1:5,1:6:3.45:47,0,3	0/1:12,0:11:3.84:67,0,4	0/0:21,1:21:0.36:0,0,50	0/0:23,0:23:69.24:0,69,1126	0/0:22,0:22:66.23:0,66,1069	0/0:45,0:44:99:0,135,2174	1/1:20,0:20:22.87:108,23,0	0/0:8,0:8:10.71:0,11,77	0/1:18,0:18:78:82,0,78	0/0:3,0:3:3.59:0,4,18
chr10	66982089	.	AT	A	7995.93	PASS	AB=0.969;AC=38;AF=0.679;AN=56;BaseQRankSum=9.650;DP=613;FS=0.343;HRun=11;HaplotypeScore=65.3292;InbreedingCoeff=0.8628;MQ=69.08;MQ0=0;MQRankSum=-0.381;QD=18.77;ReadPosRankSum=2.509;VQSLOD=5.9148;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,99,1018	0/0:8,0:8:24.04:0,24,242	0/1:14,1:15:19.62:20,0,197	0/1:9,0:9:2.36:19,0,2	0/0:26,0:26:47.82:0,48,706	1/1:0,18:18:50.94:419,51,0	1/1:2,20:22:24.99:411,25,0	0/0:28,3:32:19.72:0,20,599	1/1:3,13:16:32.96:271,33,0	1/1:4,20:24:59.92:493,60,0	1/1:3,26:29:68.87:567,69,0	1/1:2,20:22:53.93:443,54,0	0/0:22,0:22:51.10:0,51,528	1/1:3,17:20:50.94:419,51,0	1/1:1,18:19:47.94:394,48,0	1/1:1,20:22:52.98:425,53,0	1/1:4,28:32:77.89:640,78,0	1/1:3,13:16:32.96:271,33,0	1/1:3,14:17:41.93:342,42,0	1/1:3,26:30:73.93:597,74,0	1/1:5,16:21:38.94:320,39,0	0/0:16,0:16:17.50:0,18,391	0/0:26,0:26:69.17:0,69,733	0/0:17,0:17:42.10:0,42,442	1/1:1,22:23:62.93:517,63,0	1/1:6,17:23:50.92:419,51,0	1/1:2,36:38:98.87:813,99,0	1/1:2,8:10:23.96:197,24,0
chr10	66982951	.	AAGAGAG	A	414.74	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=4.997;DP=536;FS=3.923;HRun=0;HaplotypeScore=157.5479;InbreedingCoeff=0.5876;MQ=76.89;MQ0=8;MQRankSum=-3.945;QD=9.22;ReadPosRankSum=-0.911;VQSLOD=2.6311;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:17.82:0,18,782	0/0:9,0:10:24.08:0,24,670	0/0:32,0:21:22.55:0,23,825	0/0:31,0:17:26.74:0,27,659	1/1:3,13:21:24.08:507,24,0	0/0:24,0:24:28.96:0,29,168	0/0:7,0:7:11.10:0,11,54	0/0:23,0:23:60.21:0,60,1776	0/0:17,0:17:20.45:0,20,178	0/0:23,0:23:62.35:0,62,583	0/0:23,0:23:39.15:0,39,221	0/0:12,0:12:20.42:0,20,182	0/0:19,0:21:63.18:0,63,1698	0/0:14,0:14:14.46:0,14,78	0/1:24,0:24:2.69:3,0,134	0/0:17,0:17:26.29:0,26,165	0/0:19,0:19:42.75:0,43,225	0/0:8,0:8:22.06:0,22,192	0/0:23,0:22:5.12:0,5,462	0/0:23,0:23:33.96:0,34,180	0/0:8,0:8:5.78:0,6,31	0/0:12,0:13:30.07:0,30,819	0/0:24,0:24:63.22:0,63,1877	0/0:22,0:22:54.14:0,54,1621	0/0:13,0:13:30.78:0,31,164	0/0:26,0:26:69.37:0,69,589	0/0:19,0:19:31.61:0,32,160	0/0:18,0:18:25.11:0,25,123
chr10	66982964	.	AGAGT	A	10182.21	PASS	AB=1.000;AC=38;AF=0.679;AN=56;BaseQRankSum=1.184;DP=533;FS=12.490;HRun=0;HaplotypeScore=105.0312;InbreedingCoeff=0.7960;MQ=71.98;MQ0=10;MQRankSum=1.251;QD=27.23;ReadPosRankSum=4.639;VQSLOD=3.8876;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:18.18:0,18,515	0/0:13,0:13:20.85:0,21,396	0/1:29,0:16:7.39:7,0,285	0/0:26,0:12:20.58:0,21,241	0/1:25,0:25:55.43:55,0,101	1/1:1,21:22:27.02:493,27,0	1/1:0,7:7:12.04:237,12,0	0/0:26,0:26:5.11:0,5,611	1/1:1,14:15:18.05:322,18,0	1/1:1,22:23:65.78:838,66,0	1/1:1,25:25:42.08:783,42,0	1/1:1,12:13:14.99:297,15,0	0/0:21,0:21:56.69:0,57,1078	1/1:0,14:14:15.05:297,15,0	1/1:0,23:24:36.12:691,36,0	1/1:1,16:17:24.08:465,24,0	1/1:0,19:19:45.15:890,45,0	1/1:8,2:10:12.64:277,13,0	1/1:4,18:21:47:704,47,0	1/1:0,20:20:36.59:708,37,0	1/1:1,9:9:6.02:119,6,0	0/0:10,0:10:26.65:0,27,556	0/0:23,0:23:52.91:0,53,1326	0/0:21,0:21:60.10:0,60,1229	1/1:0,14:14:33.11:652,33,0	1/1:0,30:30:89.85:1159,90,0	1/1:0,18:18:32.78:653,33,0	1/1:0,16:16:27.09:533,27,0
chr10	66982966	.	A	AGT	418.92	PASS	AB=0.667;AC=5;AF=0.089;AN=56;BaseQRankSum=-1.133;DP=529;FS=12.440;HRun=0;HaplotypeScore=123.9069;InbreedingCoeff=0.5876;MQ=69.60;MQ0=10;MQRankSum=-2.570;QD=7.35;ReadPosRankSum=-1.598;VQSLOD=2.5747;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:10,10:20:22.28:215,0,22	1/1:4,8:12:12.03:168,12,0	0/0:27,0:14:5.92:0,6,39	0/0:24,0:10:2.50:0,2,9	1/1:25,0:25:26.07:160,26,0	0/0:22,0:22:22.73:0,23,113	0/0:7,0:7:11.36:0,11,56	0/0:26,0:26:26.64:0,27,240	0/0:14,0:15:17.04:0,17,84	0/0:23,0:23:34.04:0,34,184	0/0:26,0:25:37.95:0,38,190	0/0:13,0:13:14.20:0,14,70	0/0:20,0:20:16.39:0,16,374	0/0:14,0:14:14.20:0,14,70	0/0:24,0:24:34.05:0,34,168	0/0:17,0:17:22.73:0,23,113	0/0:19,0:19:42.61:0,43,211	0/0:10,0:10:17.29:0,17,104	0/0:22,0:21:34.53:0,35,192	0/0:20,0:20:33.96:0,34,168	0/0:10,0:9:5.68:0,6,28	0/0:11,0:11:21.02:0,21,222	0/0:21,0:23:56.77:0,57,577	0/0:21,0:21:3.60:0,4,405	0/0:14,0:14:31.28:0,31,155	0/0:30,0:30:52.13:0,52,311	0/0:18,0:18:31.08:0,31,155	0/0:16,0:16:25.57:0,26,127
chr10	66983257	.	GC	G	617.53	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.392;DP=565;FS=3.368;HRun=1;HaplotypeScore=55.4979;InbreedingCoeff=0.9874;MQ=69.40;MQ0=1;MQRankSum=-2.405;QD=30.88;ReadPosRankSum=-0.195;VQSLOD=3.1919;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:60.20:0,60,955	0/0:6,0:6:18.06:0,18,286	0/0:16,0:12:33.11:0,33,525	0/0:25,0:25:66.18:0,66,1002	1/1:0,20:20:51.17:712,51,0	0/0:27,0:27:81.28:0,81,1284	0/0:22,0:22:63.20:0,63,974	0/0:28,0:28:81.28:0,81,1296	0/0:23,0:23:69.24:0,69,1102	0/0:18,0:18:54.18:0,54,864	0/0:23,0:22:66.23:0,66,1055	0/0:19,0:19:57.19:0,57,909	0/0:11,0:11:33.11:0,33,520	0/0:19,0:19:57.19:0,57,908	0/0:26,0:26:78.27:0,78,1245	0/0:17,0:17:51.17:0,51,815	0/0:20,0:20:60.20:0,60,945	0/0:8,0:8:21.07:0,21,335	0/0:12,0:12:33.09:0,33,501	0/0:23,0:23:69.22:0,69,1077	0/0:37,0:37:99:0,111,1770	0/0:15,0:15:45.15:0,45,716	0/0:18,0:18:54.17:0,54,837	0/0:20,0:20:60.20:0,60,956	0/0:24,0:24:72.25:0,72,1149	0/0:20,0:20:60.20:0,60,958	0/0:32,0:32:96.33:0,96,1527	0/0:16,0:16:48.16:0,48,767
chr10	66983695	.	C	CG	812.21	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-0.930;DP=622;FS=0.754;HRun=5;HaplotypeScore=58.9377;InbreedingCoeff=0.9915;MQ=87.43;MQ0=0;MQRankSum=-1.700;QD=29.01;ReadPosRankSum=-0.501;VQSLOD=3.7093;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:39.10:0,39,419	0/0:14,0:14:42.11:0,42,451	0/0:31,0:30:52.39:0,52,591	0/0:14,0:14:32.92:0,33,291	1/1:2,26:28:69.22:907,69,0	0/0:23,0:23:69.16:0,69,733	0/0:20,0:20:54.07:0,54,558	0/0:36,0:36:99:0,102,1073	0/0:28,0:28:69.15:0,69,732	0/0:31,0:31:93.23:0,93,999	0/0:22,0:22:57.14:0,57,612	0/0:17,0:17:51.11:0,51,539	0/0:21,0:21:57.14:0,57,612	0/0:20,0:20:51.13:0,51,548	0/0:27,0:27:75.19:0,75,806	0/0:20,0:20:51.13:0,51,548	0/0:15,0:15:42.10:0,42,451	0/0:8,0:8:18.04:0,18,193	0/0:22,0:22:66.17:0,66,709	0/0:33,0:33:90.20:0,90,953	0/0:22,0:22:60.15:0,60,644	0/0:35,0:35:93.19:0,93,987	0/0:26,0:26:69.17:0,69,741	0/0:21,0:21:63.14:0,63,668	0/0:13,0:13:36.08:0,36,380	0/0:21,0:21:60.12:0,60,624	0/0:27,0:27:72.11:0,72,750	0/0:14,0:14:39.10:0,39,419
chr10	66985689	.	T	TTCTCTCTC	6122.47	PASS	AB=0.849;AC=39;AF=0.780;AN=50;BaseQRankSum=-1.758;DP=547;FS=30.275;HRun=0;HaplotypeScore=151.7000;InbreedingCoeff=0.5713;MQ=58.60;MQ0=10;MQRankSum=-2.563;QD=14.34;ReadPosRankSum=-2.234;VQSLOD=2.3967;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:12,0:20:20.85:49,0,21	0/1:7,0:6:0:0,0,0	./.	./.	0/0:22,0:21:17.17:0,17,193	1/1:26,0:24:15.02:185,15,0	1/1:16,0:23:6.02:123,6,0	1/1:33,0:31:11.90:84,12,0	1/1:13,3:20:14.68:327,15,0	1/1:19,0:19:21.06:453,21,0	1/1:16,0:15:6.02:133,6,0	1/1:11,5:17:8.99:228,9,0	0/1:16,0:20:73.06:73,0,112	1/1:14,0:14:14.97:250,15,0	1/1:24,0:23:30.09:585,30,0	1/1:18,0:22:11.99:293,12,0	1/1:14,4:20:18.53:594,19,0	1/1:12,0:11:3.01:83,3,0	1/1:16,0:16:15.04:351,15,0	1/1:21,0:20:21.04:473,21,0	./.	0/0:11,0:9:9.03:0,9,200	0/0:18,0:18:8.85:0,9,175	0/0:16,0:15:24.51:0,25,447	1/1:18,0:16:9.03:245,9,0	1/1:22,5:27:31.66:747,32,0	1/1:27,0:28:33.66:640,34,0	1/1:20,0:20:9.03:205,9,0
chr10	66985883	.	TTCTTTTTTTTTTTTC	T	1439.08	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=6.503;DP=566;FS=0.879;HRun=0;HaplotypeScore=229.8996;InbreedingCoeff=0.6294;MQ=72.00;MQ0=4;MQRankSum=-2.947;QD=39.97;ReadPosRankSum=0.271;VQSLOD=2.7730;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:28:72.14:0,72,3627	0/0:6,0:6:12.03:0,12,650	0/0:41,0:24:56.07:0,56,1015	0/0:29,0:13:8.89:0,9,401	1/1:1,24:25:46.84:1533,47,0	0/0:14,0:11:12.04:0,12,604	0/0:18,0:16:45.12:0,45,2046	0/0:30,0:30:87.26:0,87,3342	0/0:13,0:13:36.10:0,36,1809	0/0:24,0:22:66.22:0,66,3002	0/0:19,0:19:18.43:0,18,2719	0/0:17,0:15:27.09:0,27,1466	0/0:10,0:10:30.07:0,30,1577	0/0:21,0:21:42.13:0,42,2081	0/0:14,0:14:33:0,33,1385	0/0:21,0:20:42.07:0,42,1990	0/0:17,0:17:51.13:0,51,2470	0/0:19,0:19:51.06:0,51,2495	0/0:18,0:17:54.18:0,54,2517	0/0:29,0:29:87.28:0,87,4031	0/0:10,0:10:24.05:0,24,1063	0/1:11,0:11:6.70:7,0,1463	0/0:20,0:20:56.39:0,56,2851	0/0:23,0:23:60.19:0,60,3495	0/0:18,0:18:54.18:0,54,2710	0/0:22,0:21:63.19:0,63,2805	0/0:26,0:25:63.08:0,63,3119	0/0:21,0:21:48.16:0,48,2889
chr10	66985885	.	CT	C	5961	PASS	AB=0.818;AC=45;AF=0.804;AN=56;BaseQRankSum=-1.130;DP=563;FS=11.969;HRun=12;HaplotypeScore=77.1426;InbreedingCoeff=0.4775;MQ=71.94;MQ0=4;MQRankSum=-1.489;QD=11.99;ReadPosRankSum=3.279;VQSLOD=3.5128;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:12,17:27:1.92:378,2,0	1/1:0,5:5:11.95:93,12,0	0/1:40,0:24:23.50:23,0,74	0/1:27,1:12:18.91:34,0,19	1/1:25,0:25:3.56:41,4,0	1/1:3,11:11:8.96:70,9,0	1/1:8,8:15:27.76:225,28,0	1/1:10,18:28:26.25:385,26,0	1/1:8,5:13:2.46:201,2,0	1/1:12,12:22:16.39:371,16,0	1/1:6,13:19:19.56:322,20,0	1/1:3,14:15:23.78:178,24,0	0/0:10,0:10:24.05:0,24,243	1/1:5,15:20:5.78:203,6,0	1/1:7,6:13:17.88:139,18,0	1/1:4,15:19:31.81:238,32,0	1/1:6,11:17:44.83:348,45,0	1/1:8,10:18:7.39:238,7,0	1/1:1,17:18:44.79:347,45,0	1/1:3,28:31:76.10:573,76,0	0/1:2,7:9:6.63:98,0,7	0/0:10,0:11:2.61:0,3,192	0/0:20,0:21:24.97:0,25,379	0/0:23,0:24:56.95:0,57,560	1/1:10,8:18:50.77:390,51,0	1/1:14,11:24:6.07:311,6,0	1/1:6,18:25:52.32:385,52,0	1/1:0,21:21:47.82:372,48,0
chr10	66986011	.	CTCCTCT	C	5082.66	PASS	AB=0.784;AC=30;AF=0.577;AN=52;BaseQRankSum=1.507;DP=600;FS=2.265;HRun=0;HaplotypeScore=108.0080;InbreedingCoeff=0.5583;MQ=27.72;MQ0=109;MQRankSum=-7.623;QD=12.19;ReadPosRankSum=-3.486;VQSLOD=3.1229;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:23:26.24:0,26,184	0/0:5,0:4:5.84:0,6,34	./.	./.	0/0:20,0:17:19.28:0,19,91	1/1:21,8:20:20.93:205,21,0	1/1:14,4:8:15.03:235,15,0	0/1:31,3:25:99:210,0,133	0/1:9,10:14:51.29:287,0,51	0/1:37,8:24:99:468,0,264	0/1:12,8:14:99:264,0,122	1/1:11,7:10:15.48:264,15,0	0/0:20,0:18:45.15:0,45,1378	1/1:20,14:18:4.31:309,4,0	1/1:8,7:10:20.98:311,21,0	1/1:6,12:12:5.93:86,6,0	1/1:18,4:5:12.01:166,12,0	0/0:16,1:4:2.92:0,3,32	1/1:17,5:12:29.73:485,30,0	1/1:11,12:17:26.87:358,27,0	0/0:7,0:2:6.02:0,6,95	0/0:28,0:22:60.09:0,60,1664	0/0:15,0:15:23.34:0,23,602	0/0:36,0:29:25.75:0,26,1118	1/1:16,7:16:14.93:147,15,0	1/1:16,12:21:48.06:765,48,0	1/1:12,16:20:22.80:414,23,0	1/1:17,4:9:6.02:107,6,0
chr10	66986118	.	GT	G	6251.07	PASS	AB=0.766;AC=43;AF=0.768;AN=56;BaseQRankSum=5.123;DP=513;FS=22.733;HRun=11;HaplotypeScore=61.8303;InbreedingCoeff=0.5795;MQ=52.92;MQ0=29;MQRankSum=-1.278;QD=14.85;ReadPosRankSum=1.889;VQSLOD=3.5325;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,26:29:67.89:540,68,0	1/1:2,3:5:11.01:80,11,0	0/1:21,1:6:9.28:9,0,106	0/0:9,2:3:8.92:0,9,69	1/1:8,20:26:56.93:468,57,0	1/1:3,11:13:25.03:265,25,0	1/1:1,12:12:29.89:239,30,0	1/1:4,15:15:44.93:367,45,0	1/1:3,11:13:29.79:224,30,0	1/1:8,23:29:74.88:615,75,0	1/1:1,16:17:35.89:289,36,0	1/1:0,20:18:44.95:369,45,0	0/0:12,0:12:23.81:0,24,208	1/1:3,14:13:26.91:215,27,0	1/1:5,21:24:38.89:314,39,0	1/1:1,18:17:38.96:320,39,0	1/1:4,14:15:32.96:271,33,0	0/1:5,7:8:1.41:105,0,1	0/1:5,4:8:39.02:80,0,39	0/1:7,9:15:2.18:181,0,2	1/1:1,2:2:3:25,3,0	0/1:9,1:9:0.61:1,0,186	0/0:26,2:27:25.92:0,26,678	0/0:40,0:38:69.13:0,69,713	1/1:5,14:17:37.94:294,38,0	1/1:6,27:32:73.59:589,74,0	1/1:3,13:16:34.80:293,35,0	1/1:1,4:4:11.99:98,12,0
chr10	66988530	.	A	AT	12122.15	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-13.598;DP=582;FS=0.701;HRun=6;HaplotypeScore=50.2134;InbreedingCoeff=0.9980;MQ=80.17;MQ0=0;MQRankSum=-3.859;QD=31.65;ReadPosRankSum=2.380;VQSLOD=5.1975;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,114,1146	0/0:10,0:10:30.07:0,30,306	0/0:12,0:12:24.02:0,24,235	0/0:19,0:19:54.12:0,54,544	0/0:29,0:29:69.14:0,69,697	1/1:0,15:15:45.14:566,45,0	1/1:1,15:16:39.12:491,39,0	0/0:26,0:26:63.13:0,63,637	1/1:0,15:15:36.12:453,36,0	1/1:2,35:37:99:1306,105,0	1/1:4,19:23:54.09:644,54,0	1/1:1,12:13:24.08:302,24,0	0/0:12,0:12:33.07:0,33,336	1/1:1,17:18:45.14:566,45,0	1/1:1,16:17:42.13:528,42,0	1/1:4,17:21:51.16:642,51,0	1/1:2,16:18:42.13:528,42,0	1/1:3,25:28:75.24:941,75,0	1/1:2,20:22:60.18:741,60,0	1/1:2,38:40:99:1324,108,0	1/1:1,11:12:33.11:415,33,0	0/0:22,0:22:60.13:0,60,612	0/0:15,0:15:42.10:0,42,429	0/0:13,0:13:33.03:0,33,326	1/1:3,18:21:48.15:604,48,0	1/1:5,23:28:72.70:902,73,0	1/1:2,29:31:75.24:943,75,0	1/1:0,8:8:18.06:226,18,0
chr10	66990821	.	GAGGCTTAGGAGTGATA	G	766.36	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.572;DP=467;FS=0.000;HRun=0;HaplotypeScore=197.4908;InbreedingCoeff=0.9175;MQ=96.07;MQ0=0;MQRankSum=-2.572;QD=63.86;ReadPosRankSum=-1.733;VQSLOD=2.7255;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:48.16:0,48,3369	0/0:9,0:9:24.08:0,24,1769	0/0:21,0:21:36.14:0,36,2111	0/0:23,0:23:66.23:0,66,3910	1/1:5,7:12:21.03:858,21,0	0/0:12,0:12:33.11:0,33,2587	0/0:19,0:19:57.20:0,57,3846	0/0:26,0:26:75.26:0,75,3761	0/0:16,0:16:39.13:0,39,3061	0/0:13,0:13:39.13:0,39,2982	0/0:7,0:7:21.07:0,21,1375	0/0:19,0:19:57.20:0,57,4321	0/0:14,0:14:39.13:0,39,2624	0/0:18,0:18:48.15:0,48,3254	0/0:19,0:18:54.17:0,54,3797	0/0:27,0:27:75.23:0,75,5055	0/0:23,0:23:60.19:0,60,4317	0/0:18,0:18:51.16:0,51,3665	0/0:24,0:24:72.23:0,72,4587	0/0:13,0:13:39.13:0,39,2884	0/0:23,0:23:69.24:0,69,4651	0/0:5,0:5:15.05:0,15,1180	0/0:6,0:6:12.04:0,12,932	0/0:11,0:11:27.09:0,27,2108	0/0:18,0:18:51.17:0,51,4001	0/0:12,0:12:36.12:0,36,2652	0/0:35,0:35:94.55:0,95,5967	0/0:4,0:4:12.04:0,12,907
chr10	66990899	.	GT	G	7034.40	PASS	AB=0.904;AC=44;AF=0.786;AN=56;BaseQRankSum=-0.643;DP=535;FS=8.463;HRun=11;HaplotypeScore=64.1871;InbreedingCoeff=0.7679;MQ=69.10;MQ0=4;MQRankSum=0.793;QD=16.13;ReadPosRankSum=2.272;VQSLOD=5.6060;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,23:28:61.96:498,62,0	1/1:3,4:8:14:104,14,0	0/0:28,0:15:31.36:0,31,264	0/1:26,2:15:16.56:17,0,133	0/0:17,0:17:26.90:0,27,331	1/1:3,15:18:35.94:296,36,0	1/1:0,9:10:23.01:178,23,0	1/1:8,19:27:39.25:444,39,0	1/1:2,17:19:41.95:345,42,0	1/1:2,15:17:41.93:342,42,0	1/1:1,16:17:15.96:337,16,0	1/1:2,12:14:32.96:271,33,0	0/1:12,2:14:16.21:16,0,247	1/1:2,16:18:44.93:369,45,0	1/1:5,13:18:38.92:319,39,0	1/1:4,25:29:58.99:553,59,0	1/1:5,20:26:49.94:396,50,0	1/1:2,12:14:29.96:246,30,0	1/1:7,10:18:31.99:252,32,0	1/1:2,15:19:51.94:397,52,0	1/1:2,15:17:38.45:304,38,0	0/0:10,0:10:21.05:0,21,224	0/0:21,1:22:8.16:0,8,492	0/0:20,1:22:32.53:0,33,525	1/1:5,9:15:29:228,29,0	1/1:0,18:17:50.71:402,51,0	1/1:4,29:34:70.95:572,71,0	1/1:2,8:10:17.98:148,18,0
chr10	66991053	.	CTTG	C	11500.31	PASS	AC=34;AF=0.630;AN=54;BaseQRankSum=10.075;DP=489;FS=28.676;HRun=0;HaplotypeScore=73.6752;InbreedingCoeff=0.9913;MQ=65.45;MQ0=1;MQRankSum=-1.130;QD=35.49;ReadPosRankSum=4.372;VQSLOD=3.3270;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:63.19:0,63,1276	0/0:4,0:4:12.04:0,12,246	0/0:19,0:13:39.10:0,39,745	0/0:14,0:11:17.29:0,17,335	0/0:16,0:16:44.10:0,44,867	1/1:2,19:21:51.17:818,51,0	1/1:3,14:17:41.98:663,42,0	0/0:26,0:26:69.24:0,69,1401	1/1:0,13:13:24.08:385,24,0	1/1:1,24:25:72.20:1080,72,0	1/1:0,17:17:42.14:673,42,0	1/1:1,17:18:39.13:624,39,0	0/0:14,0:14:36.11:0,36,715	1/1:1,15:16:24.08:384,24,0	1/1:2,16:18:36.12:577,36,0	1/1:0,12:12:30.10:482,30,0	1/1:2,25:27:57.19:915,57,0	1/1:2,12:14:33.07:501,33,0	1/1:4,11:14:33.07:453,33,0	1/1:1,10:11:27.06:407,27,0	1/1:1,11:12:24.07:349,24,0	0/0:6,0:6:18.06:0,18,394	0/0:13,0:13:36.11:0,36,742	0/0:28,0:28:81.70:0,82,1654	1/1:2,30:32:69.23:1095,69,0	1/1:0,25:25:75.23:1141,75,0	1/1:3,28:31:63.11:952,63,0	./.
chr10	66991543	.	G	GTGTA	356.03	PASS	AC=2;AF=0.037;AN=54;BaseQRankSum=-2.510;DP=582;FS=1.633;HRun=0;HaplotypeScore=143.1547;InbreedingCoeff=0.8597;MQ=59.88;MQ0=4;MQRankSum=-0.253;QD=16.18;ReadPosRankSum=0.102;VQSLOD=3.6049;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:51.14:0,51,796	0/0:9,0:9:14.82:0,15,251	./.	0/0:22,0:9:5.04:0,5,38	1/1:6,16:22:17.89:446,18,0	0/0:25,0:25:57.19:0,57,957	0/0:15,0:15:42.13:0,42,668	0/0:42,0:42:81.23:0,81,1229	0/0:32,0:32:75.23:0,75,1185	0/0:26,0:26:60.16:0,60,995	0/0:16,0:16:36.10:0,36,564	0/0:27,0:27:66.23:0,66,1085	0/0:17,0:17:45.15:0,45,734	0/0:23,0:23:51.17:0,51,832	0/0:10,0:10:24.06:0,24,376	0/0:18,0:18:33:0,33,437	0/0:19,0:19:54.12:0,54,874	0/0:16,0:16:39.05:0,39,599	0/0:14,0:14:27.09:0,27,448	0/0:23,0:23:39.57:0,40,608	0/0:32,0:32:63.06:0,63,1030	0/0:9,0:9:24.07:0,24,374	0/0:15,0:15:33.09:0,33,500	0/0:9,0:9:21.05:0,21,326	0/0:23,0:23:57.16:0,57,911	0/0:24,0:24:63.19:0,63,1031	0/0:28,0:28:53.17:0,53,859	0/0:17,0:17:42.13:0,42,663
chr10	66991583	.	GCA	G	11933.38	PASS	AB=1.000;AC=43;AF=0.796;AN=54;BaseQRankSum=5.719;DP=662;FS=0.000;HRun=0;HaplotypeScore=150.5863;InbreedingCoeff=0.8458;MQ=54.06;MQ0=12;MQRankSum=-0.133;QD=21.86;ReadPosRankSum=2.947;VQSLOD=5.4263;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,36:40:40.17:461,40,0	1/1:4,11:15:17.91:206,18,0	./.	0/0:32,0:4:2.92:0,3,17	0/1:27,0:27:12.95:25,0,13	1/1:32,2:34:63.64:757,64,0	1/1:23,0:23:36.01:387,36,0	1/1:9,19:28:50.65:614,51,0	1/1:23,1:24:57.09:675,57,0	1/1:28,0:28:68.99:801,69,0	1/1:25,1:26:38.93:459,39,0	1/1:24,2:26:54.11:627,54,0	0/0:19,0:19:32.82:0,33,437	1/1:26,1:27:57.18:693,57,0	1/1:20,1:21:48.11:572,48,0	1/1:11,4:15:33.06:382,33,0	1/1:22,1:23:54.17:659,54,0	1/1:17,0:16:25.17:475,25,0	1/1:13,1:13:32.99:375,33,0	1/1:13,10:23:20.77:210,21,0	1/1:37,1:38:75:885,75,0	0/0:10,0:9:23.85:0,24,356	0/0:19,0:19:50.66:0,51,790	0/0:17,0:17:48.12:0,48,728	1/1:24,1:25:45.11:535,45,0	1/1:30,0:30:84.08:975,84,0	1/1:23,2:25:56.96:678,57,0	1/1:14,1:15:41.49:483,41,0
chr10	66991592	.	CACACACAA	C	379.65	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=-7.928;DP=684;FS=5.210;HRun=0;HaplotypeScore=254.4043;InbreedingCoeff=-0.0876;MQ=54.68;MQ0=12;MQRankSum=0.578;QD=1.11;ReadPosRankSum=-7.195;VQSLOD=0.2521;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:41:26.78:0,27,1051	0/0:14,0:14:21.53:0,22,434	1/1:18,0:2:1.25:3,1,0	0/0:27,0:2:3:0,3,29	1/1:24,4:28:21.04:193,21,0	0/1:34,0:34:8.24:8,0,105	0/1:26,0:26:40.34:49,0,40	0/1:30,0:30:94.74:95,0,722	0/0:28,0:28:22.03:0,22,167	0/1:26,0:26:59.07:59,0,122	0/0:27,0:27:5.17:0,5,62	0/1:27,0:27:10.24:10,0,102	0/0:19,0:19:32.07:0,32,1128	0/0:29,0:29:19.61:0,20,138	0/0:22,0:22:11.24:0,11,109	0/0:16,0:16:19.03:0,19,80	0/1:22,0:22:27.62:28,0,67	0/0:20,0:19:17.43:0,17,172	0/1:15,0:14:11.52:12,0,50	0/0:22,0:22:11.87:0,12,41	0/1:43,0:42:3.53:4,0,176	0/0:10,0:9:24.55:0,25,855	0/0:22,0:22:60.46:0,60,2054	0/0:19,0:19:54.16:0,54,1890	0/0:23,0:23:1.96:0,2,87	0/1:34,0:34:31.02:31,0,188	0/1:25,0:25:32.01:32,0,111	0/1:15,0:15:7.68:8,0,69
chr10	66991594	.	CACACAA	C	4310.47	PASS	AB=1.000;AC=40;AF=0.714;AN=56;BaseQRankSum=8.651;DP=690;FS=1.813;HRun=0;HaplotypeScore=223.7753;InbreedingCoeff=0.7697;MQ=54.89;MQ0=12;MQRankSum=0.221;QD=8.04;ReadPosRankSum=4.993;VQSLOD=3.4792;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:42:29.77:0,30,708	0/0:14,0:14:19.44:0,19,255	1/1:17,0:2:1.25:3,1,0	0/0:26,0:2:2.84:0,3,14	1/1:24,4:28:24.53:310,25,0	1/1:34,0:34:41.91:220,42,0	1/1:26,0:26:17.22:139,17,0	0/1:30,0:30:95.98:96,0,498	1/1:28,0:28:30.57:235,31,0	1/1:26,0:26:59.42:369,59,0	1/1:27,0:27:30.72:178,31,0	1/1:28,0:28:46.58:248,47,0	0/0:18,0:18:35.07:0,35,927	1/1:30,0:30:31.41:216,31,0	1/1:23,0:23:38.87:212,39,0	1/1:17,0:17:32.72:153,33,0	1/1:21,0:21:46.03:213,46,0	0/1:20,0:19:5.32:131,0,5	1/1:15,0:14:13.09:103,13,0	1/1:22,0:22:7.96:52,8,0	1/1:45,0:44:61.61:304,62,0	0/0:10,0:9:24.54:0,25,681	0/0:23,0:23:63.45:0,63,1672	0/0:19,0:19:54.16:0,54,1540	1/1:23,0:23:36.16:168,36,0	1/1:34,0:34:57.29:389,57,0	1/1:25,1:26:52.52:365,53,0	1/1:15,0:15:27.54:207,28,0
chr10	66991597	.	AC	A	3676.73	PASS	AB=0.740;AC=31;AF=0.554;AN=56;BaseQRankSum=12.007;DP=696;FS=0.857;HRun=1;HaplotypeScore=176.3724;InbreedingCoeff=0.4847;MQ=54.23;MQ0=14;MQRankSum=-1.065;QD=7.68;ReadPosRankSum=7.426;VQSLOD=0.6154;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:45:8.43:0,8,198	0/1:13,1:14:2.20:2,0,30	0/0:18,0:1:1.25:0,1,3	0/0:27,0:2:6:0,6,68	0/0:27,0:27:11.41:0,11,181	1/1:18,16:34:50.42:285,50,0	1/1:18,9:27:19.26:104,19,0	0/0:28,0:28:22.70:0,23,309	1/1:11,15:27:30.37:257,30,0	1/1:17,9:26:13.07:226,13,0	1/1:11,16:27:31.32:195,31,0	1/1:14,15:29:30.74:212,31,0	0/0:16,0:16:42.07:0,42,581	1/1:13,15:30:21.81:248,22,0	0/1:13,12:25:9.60:191,0,10	0/1:8,11:19:11.85:162,0,12	1/1:14,7:21:30.67:176,31,0	0/1:13,7:19:12.35:177,0,12	0/1:11,3:13:31.63:88,0,32	1/1:11,11:22:21.68:141,22,0	1/1:29,16:44:48.49:288,48,0	0/0:10,0:9:23.89:0,24,360	0/0:23,0:23:62.58:0,63,967	0/0:20,0:19:57.17:0,57,847	1/1:16,9:25:33.31:194,33,0	0/1:19,16:35:65.47:294,0,65	0/1:13,10:24:4.59:258,0,5	1/1:4,11:15:9.57:179,10,0
chr10	66991599	.	AAAC	A	6016.96	PASS	AB=0.826;AC=33;AF=0.589;AN=56;BaseQRankSum=15.049;DP=710;FS=1.921;HRun=0;HaplotypeScore=186.1006;InbreedingCoeff=0.4198;MQ=54.40;MQ0=15;MQRankSum=-1.676;QD=11.46;ReadPosRankSum=8.340;VQSLOD=3.6071;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:45:59.56:0,60,879	0/0:13,0:14:8.02:0,8,213	0/1:19,0:2:13.55:14,0,41	0/0:27,0:2:6.02:0,6,103	0/1:28,0:28:25.25:25,0,90	1/1:19,16:35:34.59:467,35,0	1/1:18,8:27:2.26:124,2,0	0/0:28,0:28:66.81:0,67,783	1/1:14,14:29:40.58:461,41,0	0/1:17,9:26:14.99:343,0,15	1/1:11,15:27:34.88:368,35,0	1/1:15,12:30:20.51:368,21,0	0/0:16,0:16:41.50:0,42,795	1/1:15,15:30:42.48:491,42,0	1/1:14,11:26:37.48:405,37,0	1/1:8,10:19:10.49:268,10,0	0/1:15,7:22:1.54:219,0,2	0/1:14,7:20:47.25:265,0,47	0/1:13,3:13:47.21:119,0,47	1/1:12,10:23:19.98:193,20,0	1/1:31,15:46:5.79:383,6,0	0/0:10,0:9:23.44:0,23,452	0/0:23,0:23:63.13:0,63,1291	0/0:19,0:18:54.18:0,54,1193	1/1:17,9:26:22.33:300,22,0	0/1:19,15:35:6.93:491,0,7	1/1:14,9:24:0.52:411,1,0	1/1:4,10:15:12.69:302,13,0
chr10	66991600	.	AAC	A	8590.75	PASS	AB=0.922;AC=41;AF=0.732;AN=56;BaseQRankSum=10.833;DP=705;FS=2.001;HRun=0;HaplotypeScore=167.7974;InbreedingCoeff=0.6330;MQ=54.25;MQ0=17;MQRankSum=-0.807;QD=15.79;ReadPosRankSum=1.205;VQSLOD=5.1190;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:45:36.23:0,36,431	0/1:13,1:14:15.45:15,0,61	0/1:21,0:3:7.72:8,0,49	0/0:27,0:2:3.01:0,3,46	1/1:28,0:28:7.50:35,8,0	1/1:26,8:34:60.36:583,60,0	1/1:17,10:27:32.63:250,33,0	0/0:28,0:28:6.73:0,7,380	1/1:20,8:29:56.81:594,57,0	1/1:22,4:26:51.04:544,51,0	1/1:20,6:26:47.64:446,48,0	1/1:22,7:29:48:498,48,0	0/0:15,1:16:0.97:0,1,467	1/1:24,6:30:59.66:606,60,0	1/1:19,7:26:50.54:515,51,0	1/1:19,0:19:42.11:472,42,0	1/1:18,4:22:27.03:305,27,0	1/1:14,6:19:17.14:355,17,0	1/1:14,3:13:18.05:208,18,0	1/1:22,0:22:32.53:293,33,0	1/1:32,15:46:47.98:568,48,0	0/1:7,2:9:14.22:14,0,241	0/0:23,0:23:49.48:0,49,729	0/0:19,0:18:48.16:0,48,750	1/1:17,8:25:38.73:395,39,0	1/1:25,9:34:80.80:876,81,0	1/1:23,0:23:57.14:632,57,0	1/1:15,0:15:35.86:378,36,0
chr10	66992764	.	G	GT	659.94	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-5.588;DP=575;FS=0.839;HRun=6;HaplotypeScore=55.0052;InbreedingCoeff=0.9872;MQ=61.87;MQ0=2;MQRankSum=1.512;QD=27.50;ReadPosRankSum=0.221;VQSLOD=3.8671;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:66.12:0,66,664	0/0:7,0:7:21.05:0,21,214	0/0:22,0:16:38.46:0,38,353	0/0:14,0:12:24.02:0,24,236	1/1:2,22:24:60.19:755,60,0	0/0:19,0:19:57.12:0,57,575	0/0:11,0:11:30.03:0,30,292	0/0:41,0:41:99:0,114,1157	0/0:15,0:15:39.09:0,39,398	0/0:21,0:21:57.11:0,57,576	0/0:16,0:16:48.11:0,48,490	0/0:19,0:19:54.12:0,54,551	0/0:26,0:26:72.14:0,72,727	0/0:19,0:19:54.10:0,54,543	0/0:28,0:28:81.17:0,81,820	0/0:13,0:13:39.09:0,39,397	0/0:27,0:27:72.16:0,72,734	0/0:29,0:29:78.17:0,78,796	0/0:15,0:15:42.07:0,42,416	0/0:34,0:34:87.18:0,87,881	0/0:19,0:19:57.13:0,57,582	0/0:15,0:15:39.07:0,39,391	0/0:23,0:23:66.15:0,66,673	0/0:10,0:10:21.05:0,21,214	0/0:21,0:21:63.10:0,63,633	0/0:26,0:26:72.15:0,72,724	0/0:26,0:26:72.16:0,72,735	0/0:8,0:8:24.05:0,24,245
chr10	66994198	.	T	TC	2714.67	PASS	AB=0.709;AC=37;AF=0.661;AN=56;BaseQRankSum=0.327;DP=467;FS=6.288;HRun=10;HaplotypeScore=77.1606;InbreedingCoeff=0.4483;MQ=81.30;MQ0=0;MQRankSum=-0.582;QD=8.28;ReadPosRankSum=0.219;VQSLOD=2.1428;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:70.94:0,71,585	0/0:9,0:9:9.93:0,10,132	0/0:34,0:26:9.60:0,10,176	0/1:34,0:21:4.21:4,0,104	1/1:6,0:18:7.88:51,8,0	1/1:6,11:17:18.05:192,18,0	1/1:5,8:13:9.02:96,9,0	0/1:12,7:22:12.57:67,0,13	1/1:3,8:11:15.04:160,15,0	1/1:7,9:17:27.06:282,27,0	1/1:3,8:11:19.93:168,20,0	1/1:5,10:18:7.55:185,8,0	0/1:10,2:12:2.03:2,0,189	1/1:1,8:9:12.03:127,12,0	0/1:5,7:12:6.16:142,0,6	1/1:3,0:12:5.68:28,6,0	1/1:3,21:24:45.11:480,45,0	0/1:2,6:8:9.58:113,0,10	0/1:3,3:6:34.34:58,0,34	1/1:10,6:17:11.95:112,12,0	1/1:6,8:14:15.02:160,15,0	0/0:22,0:22:47.85:0,48,382	0/0:26,0:26:36.87:0,37,448	0/0:14,0:14:38.95:0,39,319	1/1:9,12:21:12.03:127,12,0	1/1:3,6:9:19.74:169,20,0	0/1:3,13:17:6.74:117,0,7	1/1:0,6:6:6.02:64,6,0
chr10	66995022	.	G	GTTGTTGT	2510.74	PASS	AB=0.583;AC=4;AF=0.071;AN=56;BaseQRankSum=2.926;DP=691;FS=0.578;HRun=0;HaplotypeScore=160.5004;InbreedingCoeff=0.4619;MQ=65.09;MQ0=4;MQRankSum=-2.462;QD=35.87;ReadPosRankSum=0.740;VQSLOD=3.1726;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:5,0:25:29.26:424,0,29	0/1:4,0:11:99:126,0,117	0/0:43,0:30:71.85:0,72,955	0/0:27,0:26:62.58:0,63,955	1/1:0,32:34:72.67:2076,73,0	0/0:21,0:21:54.16:0,54,1061	0/0:19,0:19:54.18:0,54,1018	0/0:19,0:19:45.10:0,45,668	0/0:21,0:21:63.21:0,63,1259	0/0:29,0:29:78.26:0,78,1426	0/0:21,0:21:63.21:0,63,1371	0/0:20,0:20:60.19:0,60,1291	0/0:28,0:28:81.26:0,81,1690	0/0:22,0:22:60.18:0,60,1353	0/0:24,0:24:72.24:0,72,1453	0/0:27,0:27:75.25:0,75,1676	0/0:33,0:33:89.04:0,89,2070	0/0:26,0:25:72.22:0,72,1436	0/0:18,0:18:54.18:0,54,922	0/0:38,0:38:99:0,111,2222	0/0:13,0:13:36.11:0,36,716	0/0:15,0:15:45.14:0,45,1015	0/0:24,0:24:49.40:0,49,1205	0/0:24,0:24:66.22:0,66,1450	0/0:23,0:23:63.68:0,64,1402	0/0:33,0:33:93.30:0,93,1910	0/0:41,0:41:99:0,119,2402	0/0:11,0:11:33.01:0,33,741
chr10	66995420	.	A	AGG	1642.14	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-6.943;DP=668;FS=8.157;HRun=1;HaplotypeScore=105.1143;InbreedingCoeff=0.9898;MQ=78.29;MQ0=0;MQRankSum=-1.366;QD=45.62;ReadPosRankSum=0.145;VQSLOD=3.0039;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,120,1832	0/0:11,0:11:33.11:0,33,505	0/0:17,0:17:19.78:0,20,486	0/0:12,0:12:29.58:0,30,390	1/1:1,35:36:96.16:1737,96,0	0/0:23,0:23:60.19:0,60,898	0/0:32,0:32:93.30:0,93,1399	0/0:36,0:36:93.27:0,93,1362	0/0:18,0:18:54.17:0,54,806	0/0:18,0:18:54.18:0,54,827	0/0:16,0:16:48.16:0,48,735	0/0:25,0:25:66.21:0,66,990	0/0:25,0:25:72.23:0,72,1080	0/0:17,0:17:48.16:0,48,735	0/0:34,0:34:99:0,102,1518	0/0:28,0:28:84.26:0,84,1242	0/0:35,0:35:99:0,105,1606	0/0:14,0:14:42.14:0,42,638	0/0:25,0:25:75.25:0,75,1145	0/0:26,0:26:78.26:0,78,1193	0/0:39,0:39:99:0,114,1725	0/0:23,0:23:69.22:0,69,1032	0/0:17,0:17:51.17:0,51,781	0/0:19,0:19:54.17:0,54,805	0/0:21,0:21:60.20:0,60,917	0/0:24,0:24:63.21:0,63,965	0/0:29,0:29:87.26:0,87,1261	0/0:7,0:7:21.06:0,21,300
chr10	66995726	.	TA	T	730.39	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.652;DP=473;FS=18.061;HRun=7;HaplotypeScore=45.0384;InbreedingCoeff=0.8239;MQ=68.04;MQ0=0;MQRankSum=1.718;QD=26.09;ReadPosRankSum=1.025;VQSLOD=2.0352;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:54.17:0,54,679	0/0:6,0:6:15.05:0,15,189	0/0:2,0:2:3.01:0,3,38	0/0:8,0:8:15.04:0,15,171	1/1:0,28:28:81.18:825,81,0	0/0:18,0:18:51.16:0,51,642	0/0:11,0:11:33.11:0,33,415	0/0:28,0:28:78.22:0,78,938	0/0:16,0:16:48.15:0,48,604	0/0:31,0:31:87.27:0,87,1076	0/0:21,0:21:51.16:0,51,631	0/0:20,0:20:54.16:0,54,661	0/0:12,0:12:33.11:0,33,414	0/0:13,0:13:33.09:0,33,402	0/0:11,0:11:30.08:0,30,355	0/0:10,0:10:30.10:0,30,377	0/0:21,0:21:54.17:0,54,679	0/0:18,0:18:45.10:0,45,548	0/0:17,0:17:48.15:0,48,604	0/0:30,0:30:90.22:0,90,1081	0/0:20,0:20:51.16:0,51,642	0/0:8,0:8:24.08:0,24,302	0/0:14,0:14:39.12:0,39,491	0/0:9,0:9:27.09:0,27,340	0/0:22,0:22:51.16:0,51,642	0/0:20,0:20:51.15:0,51,629	0/0:32,0:31:90.29:0,90,1132	0/0:9,0:9:27.09:0,27,339
chr10	66996084	.	C	CT	2301.78	PASS	AB=0.817;AC=33;AF=0.611;AN=54;BaseQRankSum=-4.445;DP=352;FS=6.116;HRun=11;HaplotypeScore=59.9424;InbreedingCoeff=0.4842;MQ=76.26;MQ0=1;MQRankSum=-0.615;QD=9.36;ReadPosRankSum=0.472;VQSLOD=2.3612;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:16,1:17:10.48:10,0,117	0/1:9,0:9:0.71:1,0,139	0/0:7,0:5:1.48:0,1,4	0/0:29,0:23:9.77:0,10,91	./.	1/1:5,6:12:13.26:120,13,0	1/1:3,9:12:19.24:175,19,0	0/0:31,0:32:53.66:0,54,417	1/1:2,7:8:11.98:111,12,0	1/1:4,10:14:6.80:236,7,0	0/1:7,8:15:6.85:108,0,7	1/1:6,4:10:15.80:122,16,0	0/0:9,0:9:11.93:0,12,93	1/1:2,8:10:21.93:215,22,0	0/1:12,0:11:0:0,0,0	1/1:2,8:10:15.03:152,15,0	1/1:1,9:10:18.04:182,18,0	1/1:2,5:6:3.01:31,3,0	1/1:5,7:11:12:114,12,0	1/1:12,7:19:33.03:315,33,0	0/1:2,7:9:14.73:28,0,15	0/0:4,0:4:2.95:0,3,23	0/0:6,0:6:8.94:0,9,70	0/0:8,0:8:17.91:0,18,139	1/1:3,13:16:18.04:183,18,0	1/1:6,11:17:3.81:220,4,0	0/1:17,0:17:0:0,0,0	0/1:2,7:9:2.28:148,0,2
chr10	66996095	.	TAGTATAGTATAGTA	T	2729.60	PASS	AB=0.880;AC=35;AF=0.648;AN=54;BaseQRankSum=-6.068;DP=318;FS=10.813;HRun=0;HaplotypeScore=103.8807;InbreedingCoeff=0.5092;MQ=80.33;MQ0=10;MQRankSum=-0.899;QD=14.14;ReadPosRankSum=-0.727;VQSLOD=1.1064;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:12,0:12:4.39:4,0,508	0/0:8,0:8:23.95:0,24,350	1/1:12,0:4:2.68:12,3,0	0/0:55,0:30:0.72:0,1,126	./.	1/1:8,0:8:16.27:184,16,0	1/1:8,0:8:19.25:200,19,0	0/0:31,0:31:59.70:0,60,513	1/1:6,0:5:11.98:111,12,0	1/1:13,0:13:6.79:236,7,0	0/1:12,0:12:3.84:146,0,4	1/1:10,0:10:15.80:122,16,0	0/0:5,0:5:11.95:0,12,93	1/1:8,0:8:21.05:237,21,0	0/1:0,0:10:0:0,0,0	1/1:7,0:7:15.03:177,15,0	1/1:8,0:8:18.04:182,18,0	1/1:5,0:5:3.01:31,3,0	1/1:5,0:5:9.02:91,9,0	1/1:13,0:13:36.04:356,36,0	0/1:7,0:7:14.73:28,0,15	0/0:3,0:3:2.96:0,3,23	0/0:5,0:5:8.94:0,9,70	0/0:8,0:8:17.91:0,18,139	1/1:12,0:12:18.04:183,18,0	1/1:12,0:12:3.82:220,4,0	1/1:0,15:15:3.48:118,3,0	0/1:8,0:9:2.19:263,0,2
chr10	66996154	.	ATG	A	139.05	PASS	AB=0.923;AC=11;AF=0.212;AN=52;BaseQRankSum=1.751;DP=424;FS=2.293;HRun=0;HaplotypeScore=71.7818;InbreedingCoeff=-0.3131;MQ=51.43;MQ0=25;MQRankSum=0.436;QD=1.13;ReadPosRankSum=1.220;VQSLOD=1.6329;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:8:8.87:0,9,66	0/0:1,0:1:2.98:0,3,22	0/0:64,0:24:11.93:0,12,136	0/0:102,0:30:28.35:0,28,404	./.	0/0:12,0:11:9.44:0,9,72	0/1:8,0:8:19.77:20,0,172	0/1:29,1:26:19.37:19,0,117	0/0:7,1:7:5.95:0,6,84	0/1:8,0:8:19.78:20,0,164	0/1:6,2:7:55.22:55,0,87	0/1:6,1:6:22.78:23,0,126	0/1:11,0:11:4.75:5,0,359	0/0:4,0:4:2.74:0,3,12	0/0:7,0:5:3.01:0,3,47	0/0:9,0:9:12.47:0,12,162	0/0:13,1:14:6.58:0,7,130	0/0:5,0:5:9.03:0,9,128	0/0:11,0:8:17.03:0,17,196	0/1:16,1:16:17.58:18,0,165	./.	0/1:2,1:3:28.78:29,0,41	0/0:10,0:10:21.07:0,21,317	0/1:13,0:13:9.85:10,0,304	0/0:10,0:10:9.03:0,9,140	0/1:7,2:9:61.45:61,0,70	0/0:13,2:15:11.98:0,12,158	0/1:9,0:8:15.05:15,0,209
chr10	66997704	.	GACAC	G	1970.81	PASS	AB=0.818;AC=29;AF=0.558;AN=52;BaseQRankSum=1.175;DP=497;FS=1.422;HRun=0;HaplotypeScore=93.4308;InbreedingCoeff=0.4943;MQ=54.69;MQ0=15;MQRankSum=1.992;QD=6.89;ReadPosRankSum=2.898;VQSLOD=2.0607;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:44:51.09:0,51,825	0/0:5,0:5:5.78:0,6,78	./.	./.	0/0:14,0:16:26.68:0,27,502	1/1:10,7:18:20.97:270,21,0	0/1:13,0:13:3.93:41,0,4	0/0:32,0:30:17.92:0,18,168	0/1:4,0:5:16.93:19,0,17	1/1:14,3:17:6.02:93,6,0	1/1:11,8:19:12.03:159,12,0	1/1:11,3:15:18.04:238,18,0	0/0:12,0:14:23.46:0,23,350	0/0:6,3:9:2.37:0,2,8	0/1:9,6:15:15.28:41,0,15	1/1:5,4:10:8.54:121,9,0	1/1:19,3:23:14.73:203,15,0	1/1:18,2:21:7.58:152,8,0	0/1:12,1:15:6.47:139,0,6	1/1:13,10:25:2.56:174,3,0	1/1:23,0:23:2.99:25,3,0	0/0:11,0:11:11.96:0,12,227	0/0:6,0:6:11.76:0,12,177	0/0:23,0:22:26.93:0,27,465	1/1:10,7:18:12.24:187,12,0	0/1:15,4:18:9.36:44,0,9	1/1:10,2:16:14.85:172,15,0	1/1:11,0:12:11.58:79,12,0
chr10	66998107	.	G	GA	876.68	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-5.181;DP=434;FS=1.606;HRun=7;HaplotypeScore=42.4515;InbreedingCoeff=0.8118;MQ=70.79;MQ0=0;MQRankSum=-0.795;QD=29.22;ReadPosRankSum=1.098;VQSLOD=4.0182;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:42.06:0,42,405	0/0:11,0:11:30.04:0,30,290	0/0:6,0:6:14.88:0,15,141	0/0:9,0:9:16.84:0,17,150	1/1:3,27:30:81.25:971,81,0	0/0:21,0:21:60.10:0,60,579	0/0:4,0:4:12.02:0,12,116	0/0:39,0:39:99:0,99,943	0/0:16,0:16:45.07:0,45,434	0/0:23,0:23:57.07:0,57,546	0/0:18,0:18:51.08:0,51,492	0/0:10,0:10:24.03:0,24,232	0/0:14,0:14:42.05:0,42,399	0/0:8,0:8:23.96:0,24,219	0/0:16,0:16:42.07:0,42,406	0/0:10,0:10:30.05:0,30,290	0/0:19,0:19:54.09:0,54,521	0/0:15,0:15:45.07:0,45,435	0/0:17,0:17:44.99:0,45,434	0/0:22,0:22:60.10:0,60,579	0/0:13,0:13:39.06:0,39,376	0/0:2,0:2:6.01:0,6,58	0/0:12,0:12:30.05:0,30,290	0/0:3,0:3:8.97:0,9,77	0/0:18,0:17:54.09:0,54,521	0/0:21,0:21:57.08:0,57,547	0/0:30,0:30:87.14:0,87,840	0/0:10,0:10:24.03:0,24,232
chr10	66998482	.	A	AC	984.07	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.649;DP=656;FS=15.597;HRun=1;HaplotypeScore=64.4648;InbreedingCoeff=0.9992;MQ=72.72;MQ0=1;MQRankSum=-1.718;QD=41.00;ReadPosRankSum=1.173;VQSLOD=2.4583;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:84.27:0,84,1091	0/0:13,0:13:39.10:0,39,489	0/0:23,0:21:60.19:0,60,759	0/0:21,0:21:29.18:0,29,525	1/1:0,24:24:72.24:1079,72,0	0/0:29,0:29:84.26:0,84,1076	0/0:17,0:17:51.14:0,51,633	0/0:36,0:36:90.28:0,90,1145	0/0:24,0:24:69.21:0,69,881	0/0:30,0:30:87.28:0,87,1120	0/0:18,0:18:48.16:0,48,623	0/0:23,0:23:69.20:0,69,867	0/0:17,0:17:51.17:0,51,662	0/0:29,0:29:87.28:0,87,1129	0/0:34,0:34:99:0,99,1284	0/0:21,0:21:60.19:0,60,779	0/0:28,0:28:84.26:0,84,1076	0/0:13,0:13:39.13:0,39,506	0/0:19,0:19:57.18:0,57,727	0/0:30,0:30:90.29:0,90,1168	0/0:35,0:34:99:0,102,1309	0/0:18,0:18:54.18:0,54,701	0/0:17,0:17:51.17:0,51,662	0/0:22,0:22:63.20:0,63,817	0/0:14,0:14:42.12:0,42,529	0/0:27,0:27:81.26:0,81,1052	0/0:30,0:30:90.29:0,90,1169	0/0:14,0:14:42.14:0,42,545
chr10	66999649	.	GT	G	1256.81	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=9.458;DP=636;FS=0.642;HRun=2;HaplotypeScore=62.0274;InbreedingCoeff=0.9967;MQ=81.67;MQ0=0;MQRankSum=-3.118;QD=33.97;ReadPosRankSum=1.838;VQSLOD=3.7771;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:66.22:0,66,975	0/0:8,0:8:24.08:0,24,360	0/0:19,0:19:54.08:0,54,741	0/0:23,0:23:57.16:0,57,770	1/1:0,37:37:99:1352,105,0	0/0:24,0:24:72.23:0,72,1055	0/0:25,0:25:75.25:0,75,1123	0/0:26,0:26:75.25:0,75,1121	0/0:29,0:29:87.28:0,87,1277	0/0:27,0:27:81.27:0,81,1214	0/0:16,0:16:48.15:0,48,697	0/0:23,0:23:69.23:0,69,1032	0/0:29,0:29:84.28:0,84,1243	0/0:23,0:23:66.22:0,66,987	0/0:29,0:29:87.29:0,87,1302	0/0:28,0:28:81.27:0,81,1213	0/0:27,0:27:81.26:0,81,1189	0/0:11,0:11:30.10:0,30,449	0/0:17,0:17:45.13:0,45,638	0/0:25,0:25:75.25:0,75,1118	0/0:28,0:28:78.25:0,78,1149	0/0:22,0:22:66.22:0,66,989	0/0:22,0:22:63.21:0,63,936	0/0:11,0:11:30.10:0,30,450	0/0:19,0:19:57.19:0,57,830	0/0:25,0:25:75.25:0,75,1124	0/0:30,0:29:90.30:0,90,1343	0/0:11,0:11:33.01:0,33,417
chr10	67000184	.	CT	C	8260.29	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=6.300;DP=627;FS=2.189;HRun=9;HaplotypeScore=98.4016;InbreedingCoeff=0.9185;MQ=65.80;MQ0=7;MQRankSum=-3.802;QD=19.17;ReadPosRankSum=2.020;VQSLOD=4.8702;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:32,4:36:99:723,99,0	1/1:6,0:6:14.94:120,15,0	0/0:44,0:26:45.53:0,46,510	0/0:26,1:11:5.91:0,6,193	1/1:8,30:38:80.85:718,81,0	1/1:9,8:17:41.75:338,42,0	1/1:17,9:26:54.90:437,55,0	0/0:34,0:33:80.80:0,81,857	1/1:1,4:5:8.97:71,9,0	1/1:5,10:15:44.90:390,45,0	1/1:13,10:23:41.41:435,41,0	1/1:17,11:28:51.27:455,51,0	0/0:20,0:20:41.88:0,42,442	1/1:13,15:28:68.25:520,68,0	1/1:12,11:23:58.62:445,59,0	1/1:7,4:11:13.03:216,13,0	1/1:12,9:21:22.49:396,22,0	1/1:7,12:19:47.97:414,48,0	1/1:17,8:25:68.61:607,69,0	1/1:11,15:24:62.79:512,63,0	1/1:7,9:16:41.91:353,42,0	0/0:20,0:20:51.14:0,51,578	0/0:24,0:25:63.02:0,63,705	0/0:26,0:26:66.20:0,66,761	1/1:1,10:10:2.46:26,2,0	1/1:13,12:25:65.96:578,66,0	1/1:14,10:24:50.16:424,50,0	1/1:5,3:8:9:81,9,0
chr10	67000194	.	C	CT	2220.79	PASS	AB=0.987;AC=21;AF=0.375;AN=56;BaseQRankSum=10.956;DP=633;FS=13.653;HRun=9;HaplotypeScore=116.5386;InbreedingCoeff=-0.3237;MQ=64.41;MQ0=9;MQRankSum=-5.904;QD=5.78;ReadPosRankSum=6.479;VQSLOD=0.0582;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:75.41:0,75,581	0/0:4,0:4:11.75:0,12,82	0/0:50,0:23:40.94:0,41,679	0/1:31,0:12:23.60:24,0,147	0/0:34,0:34:92.73:0,93,914	0/1:14,0:14:92.08:150,0,92	0/1:25,0:25:99:137,0,104	0/0:33,0:32:86.28:0,86,810	1/1:4,0:4:8.93:71,9,0	0/1:21,0:20:75.09:75,0,165	0/1:25,0:24:97.38:97,0,190	0/1:20,6:26:99:135,0,137	0/0:15,0:15:42.14:0,42,570	0/1:26,0:26:51.86:249,0,52	0/1:26,0:26:66.29:259,0,66	0/1:12,0:12:53.39:53,0,81	0/1:21,0:20:99:116,0,176	0/1:18,0:18:34.36:210,0,34	0/1:25,0:25:6.83:7,0,317	0/1:27,0:25:49.74:252,0,50	0/1:16,0:16:46.13:134,0,46	0/0:22,0:22:66.20:0,66,881	0/0:25,0:25:68.73:0,69,886	0/0:26,0:26:75.25:0,75,1044	0/1:12,0:11:17.20:17,0,31	0/1:28,0:28:99:177,0,138	0/1:22,0:22:81.30:174,0,81	1/1:4,0:4:5.23:52,5,0
chr10	67000195	.	C	CTT	7999.03	PASS	AB=0.906;AC=40;AF=0.714;AN=56;BaseQRankSum=2.374;DP=645;FS=0.000;HRun=11;HaplotypeScore=114.4417;InbreedingCoeff=0.4513;MQ=64.01;MQ0=9;MQRankSum=-5.324;QD=15.27;ReadPosRankSum=-1.565;VQSLOD=3.2043;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:36,1:38:59.01:102,0,59	1/1:4,0:4:2.80:7,3,0	0/1:49,0:23:7.65:8,0,185	0/1:30,0:12:2.76:3,0,61	0/0:27,0:34:62.44:0,62,615	1/1:7,7:15:0.19:328,0,0	1/1:17,9:25:10.88:456,11,0	1/1:15,0:32:15.96:167,16,0	1/1:1,3:4:9.03:120,9,0	1/1:14,9:22:20.83:494,21,0	0/1:18,8:25:43.21:377,0,43	1/1:18,8:26:29.50:347,30,0	0/0:13,0:14:26.74:0,27,244	1/1:12,15:27:57.04:726,57,0	1/1:9,17:26:62.72:773,63,0	1/1:5,6:12:21.83:226,22,0	1/1:17,6:23:6.71:379,7,0	1/1:6,12:18:42.12:567,42,0	0/1:21,4:26:11.08:341,0,11	1/1:7,19:25:40.25:639,40,0	1/1:5,12:17:37.43:487,37,0	0/0:22,0:22:60.08:0,60,582	0/0:24,0:25:38.75:0,39,420	0/0:26,0:26:63.04:0,63,611	0/1:10,2:11:23.02:35,0,23	1/1:10,18:30:60.61:777,61,0	1/1:7,14:23:36.09:472,36,0	1/1:1,3:4:12.04:172,12,0
chr10	67000354	.	TACAC	T	8854.08	PASS	AB=0.658;AC=34;AF=0.607;AN=56;BaseQRankSum=5.609;DP=522;FS=2.058;HRun=0;HaplotypeScore=92.5718;InbreedingCoeff=0.7765;MQ=65.91;MQ0=5;MQRankSum=-0.228;QD=28.65;ReadPosRankSum=4.603;VQSLOD=4.8971;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:42:72.19:0,72,1232	0/0:3,0:4:6.02:0,6,126	0/0:21,0:10:6.02:0,6,119	0/0:23,0:14:8.45:0,8,158	0/0:27,0:26:7.97:0,8,144	1/1:3,11:14:24.08:395,24,0	1/1:5,15:20:30.10:493,30,0	0/0:17,0:18:38.87:0,39,805	1/1:2,9:11:20.73:345,21,0	1/1:5,6:11:21.06:322,21,0	1/1:6,15:21:39.13:628,39,0	1/1:6,14:20:24.08:394,24,0	0/0:18,1:20:1.58:0,2,998	1/1:6,13:21:39.09:591,39,0	1/1:5,15:20:42.14:690,42,0	1/1:1,15:16:42.07:633,42,0	1/1:4,16:20:39.13:641,39,0	1/1:6,11:16:21.07:345,21,0	0/1:7,4:11:6.89:174,0,7	1/1:3,7:10:21.07:345,21,0	1/1:10,14:23:33.11:543,33,0	0/0:15,0:15:30.10:0,30,683	0/0:18,0:20:35.86:0,36,790	0/0:22,0:23:47.90:0,48,1105	1/1:6,16:22:39.13:641,39,0	1/1:5,15:20:44.23:705,44,0	1/1:4,19:23:45.15:739,45,0	0/1:2,5:7:15.94:229,0,16
chr10	67000715	.	CT	C	503.95	PASS	AB=0.967;AC=6;AF=0.107;AN=56;BaseQRankSum=2.795;DP=467;FS=4.186;HRun=10;HaplotypeScore=64.2480;InbreedingCoeff=0.5748;MQ=76.61;MQ0=7;MQRankSum=1.538;QD=6.30;ReadPosRankSum=2.996;VQSLOD=1.2939;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,31:38:46.08:506,46,0	1/1:1,4:5:12:104,12,0	0/1:23,0:14:15.21:15,0,77	0/0:32,0:18:12.66:0,13,133	0/0:25,0:28:56.86:0,57,312	0/0:12,0:12:29.80:0,30,299	0/0:10,0:10:29.88:0,30,300	0/0:23,0:23:45.04:0,45,456	0/0:7,0:7:17.78:0,18,152	0/0:17,0:16:16.23:0,16,242	0/0:23,1:24:27.35:0,27,473	0/0:16,1:16:43.23:0,43,428	0/0:7,0:7:21.02:0,21,218	0/0:8,0:8:5.36:0,5,132	0/0:15,0:15:41.86:0,42,418	0/0:7,0:7:17.99:0,18,177	0/0:25,0:25:59.70:0,60,593	0/0:14,0:14:38.97:0,39,375	0/0:21,1:22:28.06:0,28,515	0/0:19,0:19:41.97:0,42,406	0/0:11,1:12:10.05:0,10,337	0/0:12,0:12:27.04:0,27,275	0/1:13,1:14:7.23:7,0,187	0/0:24,0:24:15.46:0,15,481	0/0:10,0:10:24.03:0,24,242	0/0:21,1:22:34.07:0,34,581	0/0:14,0:14:32.04:0,32,368	0/0:6,0:6:18.03:0,18,188
chr10	67000725	.	T	TTC	571.13	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.071;DP=469;FS=1.787;HRun=0;HaplotypeScore=68.1408;InbreedingCoeff=0.7855;MQ=70.22;MQ0=8;MQRankSum=1.002;QD=23.80;ReadPosRankSum=0.766;VQSLOD=4.1347;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:40:76.96:0,77,553	0/0:4,0:4:11.94:0,12,90	0/0:21,0:11:24.67:0,25,207	0/0:28,0:17:4.81:0,5,110	1/1:3,17:24:53.27:666,53,0	0/0:16,0:16:38.33:0,38,416	0/0:13,0:13:35.96:0,36,412	0/0:16,0:16:47.94:0,48,543	0/0:10,0:10:29.91:0,30,279	0/0:16,0:15:40.32:0,40,339	0/0:20,0:20:59.60:0,60,641	0/0:16,0:15:39.44:0,39,475	0/0:9,0:9:23.84:0,24,225	0/0:8,0:8:23.22:0,23,186	0/0:16,0:16:47.84:0,48,559	0/0:5,0:6:6.98:0,7,177	0/0:29,0:29:86.71:0,87,904	0/0:15,0:15:44.89:0,45,474	0/0:20,0:20:56.99:0,57,670	0/0:17,0:17:38.90:0,39,457	0/0:16,0:16:47.75:0,48,546	0/0:11,0:11:32.89:0,33,347	0/0:11,0:11:24.86:0,25,265	0/0:23,0:23:54.25:0,54,676	0/0:12,0:12:32.92:0,33,340	0/0:26,0:26:65.97:0,66,774	0/0:15,0:15:22.24:0,22,429	0/0:6,0:6:17.97:0,18,204
chr10	67001027	.	T	TC	1070.97	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-3.987;DP=500;FS=5.218;HRun=0;HaplotypeScore=50.2972;InbreedingCoeff=0.9617;MQ=86.14;MQ0=0;MQRankSum=-2.078;QD=39.67;ReadPosRankSum=-1.776;VQSLOD=3.0498;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:81.27:0,81,1132	0/0:8,0:8:24.08:0,24,336	0/0:17,0:17:48.14:0,48,617	0/0:19,0:19:47.93:0,48,541	1/1:0,27:27:75.25:1166,75,0	0/0:23,0:23:69.22:0,69,948	0/0:13,0:13:39.13:0,39,545	0/0:40,0:40:99:0,117,1636	0/0:19,0:19:57.19:0,57,797	0/0:9,0:9:27.09:0,27,377	0/0:25,0:25:75.24:0,75,1031	0/0:18,0:18:54.18:0,54,755	0/0:14,0:14:39.13:0,39,542	0/0:11,0:11:30.10:0,30,419	0/0:13,0:13:39.13:0,39,545	0/0:14,0:14:42.14:0,42,587	0/0:18,0:18:54.18:0,54,754	0/0:19,0:19:57.17:0,57,778	0/0:17,0:17:48.16:0,48,671	0/0:29,0:29:87.29:0,87,1216	0/0:22,0:22:63.21:0,63,880	0/0:7,0:7:21.07:0,21,294	0/0:14,0:14:42.14:0,42,587	0/0:5,0:5:15.01:0,15,188	0/0:11,0:11:33.11:0,33,460	0/0:30,0:30:90.29:0,90,1245	0/0:25,0:25:75.25:0,75,1047	0/0:5,0:5:15.05:0,15,209
chr10	67001970	.	A	AGT	3976.14	PASS	AB=0.799;AC=30;AF=0.577;AN=52;BaseQRankSum=-4.438;DP=636;FS=22.711;HRun=0;HaplotypeScore=109.4600;InbreedingCoeff=-0.0640;MQ=63.99;MQ0=9;MQRankSum=1.939;QD=7.83;ReadPosRankSum=-0.223;VQSLOD=1.7106;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:27:5.95:50,6,0	1/1:5,0:5:2.37:8,2,0	1/1:29,0:19:0.47:1,0,0	./.	1/1:14,0:18:3:26,3,0	0/1:23,5:28:76.74:156,0,77	1/1:11,8:19:1.32:248,1,0	0/1:28,0:27:13.98:14,0,19	0/1:11,7:18:11.55:246,0,12	1/1:14,6:20:15.04:220,15,0	0/1:10,5:14:8.53:121,0,9	0/1:16,1:18:5.11:79,0,5	0/0:22,0:24:44.76:0,45,441	0/0:7,0:7:3.01:0,3,33	0/1:19,10:29:99:431,0,194	0/1:21,15:36:12.49:500,0,12	0/1:25,9:33:34.58:327,0,35	0/1:11,4:15:77.52:119,0,78	1/1:19,5:24:12.04:176,12,0	1/1:10,7:21:9.03:134,9,0	0/1:22,7:30:23.28:80,0,23	0/0:15,0:17:8.24:0,8,72	0/0:16,0:16:24.06:0,24,261	0/0:13,0:14:35.67:0,36,352	1/1:9,8:20:6.96:254,7,0	0/1:28,8:37:5.55:328,0,6	0/1:18,14:34:84.34:457,0,84	./.
chr10	67002291	.	GA	G	10227.64	PASS	AC=52;AF=1.000;AN=52;DP=346;FS=0.000;HRun=2;HaplotypeScore=347.2807;InbreedingCoeff=-0.0130;MQ=32.04;MQ0=0;QD=29.65;VQSLOD=3.0447;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,15:16:35.98:422,36,0	1/1:1,8:9:24.03:288,24,0	./.	./.	1/1:3,18:22:33.10:416,33,0	1/1:0,16:16:45.08:558,45,0	1/1:1,11:12:33.02:388,33,0	1/1:6,16:22:51.05:602,51,0	1/1:3,3:6:11.97:133,12,0	1/1:0,17:17:51.16:653,51,0	1/1:1,14:15:30.08:386,30,0	1/1:1,10:11:32.93:365,33,0	1/1:1,11:12:36.05:443,36,0	1/1:0,17:17:51.11:636,51,0	1/1:1,7:8:23.92:251,24,0	1/1:1,10:11:30.04:367,30,0	1/1:0,7:7:18.06:232,18,0	1/1:2,2:4:9:99,9,0	1/1:0,7:7:21.07:272,21,0	1/1:6,21:27:54.03:655,54,0	1/1:0,3:3:6.02:77,6,0	1/1:3,20:23:60.15:754,60,0	1/1:1,19:20:45.01:538,45,0	1/1:1,8:9:6.02:78,6,0	1/1:3,11:14:33.11:426,33,0	1/1:2,13:15:42.14:538,42,0	1/1:0,15:15:39.13:501,39,0	1/1:3,4:7:12.04:152,12,0
chr10	67002310	.	TCC	T	5315.24	PASS	AC=50;AF=1.000;AN=50;BaseQRankSum=-1.821;DP=346;FS=3.802;HRun=4;HaplotypeScore=420.1917;InbreedingCoeff=-0.0191;MQ=31.97;MQ0=0;MQRankSum=0.602;QD=15.50;ReadPosRankSum=3.196;VQSLOD=1.3826;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,13:14:35.70:256,36,0	1/1:1,8:9:23.52:146,24,0	./.	./.	1/1:4,20:24:35.10:210,35,0	1/1:0,19:19:50.43:348,50,0	1/1:2,10:12:2.43:119,2,0	1/1:6,12:18:35.93:295,36,0	1/1:0,5:5:14.76:98,15,0	1/1:2,15:17:38.70:294,39,0	1/1:1,15:16:38.10:231,38,0	1/1:0,10:10:29.77:213,30,0	1/1:2,10:12:32.74:233,33,0	1/1:2,19:21:36.07:281,36,0	1/1:1,8:9:26.63:178,27,0	1/1:1,11:12:13.71:194,14,0	1/1:1,4:5:11.89:84,12,0	1/1:0,3:3:8.97:75,9,0	1/1:2,8:10:23.95:209,24,0	1/1:4,20:24:49.74:299,50,0	./.	1/1:5,16:21:47.26:309,47,0	1/1:4,18:22:46.63:273,47,0	1/1:1,7:8:5.62:37,6,0	1/1:2,14:16:41.34:272,41,0	1/1:1,14:15:44.57:322,45,0	1/1:3,15:18:41.30:275,41,0	1/1:0,3:3:8.91:63,9,0
chr10	67002315	.	G	GT	7064.22	PASS	AC=50;AF=1.000;AN=50;DP=338;FS=0.000;HRun=0;HaplotypeScore=439.4921;InbreedingCoeff=-0.0089;MQ=31.88;MQ0=0;QD=20.96;VQSLOD=1.7317;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,13:13:35.95:302,36,0	1/1:1,8:9:23.86:177,24,0	./.	./.	1/1:0,20:20:35.71:256,36,0	1/1:0,19:19:50.88:413,51,0	1/1:0,10:10:26.96:240,27,0	1/1:7,13:20:51.07:548,51,0	1/1:3,5:8:17.94:149,18,0	1/1:1,15:16:44.71:391,45,0	1/1:4,15:19:38.70:281,39,0	1/1:0,10:10:29.97:251,30,0	1/1:1,11:12:35.94:298,36,0	1/1:2,19:21:55.72:455,56,0	1/1:1,9:10:26.91:213,27,0	1/1:1,12:13:36:327,36,0	1/1:0,4:4:11.98:99,12,0	1/1:0,3:3:9.01:94,9,0	1/1:2,8:10:24.05:261,24,0	1/1:4,20:24:50.60:365,51,0	./.	1/1:1,16:17:47.80:370,48,0	1/1:0,19:19:47.52:335,48,0	1/1:0,7:7:6.44:46,6,0	1/1:0,15:15:41.83:329,42,0	1/1:3,15:18:44.97:431,45,0	1/1:0,16:16:41.81:329,42,0	1/1:1,3:4:11.99:105,12,0
chr10	67002333	.	GA	G	9172.50	PASS	AC=50;AF=0.962;AN=52;BaseQRankSum=4.771;DP=358;FS=51.329;HRun=2;HaplotypeScore=474.7317;InbreedingCoeff=0.4475;MQ=31.84;MQ0=0;MQRankSum=-0.993;QD=25.77;ReadPosRankSum=5.202;VQSLOD=0.1331;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,10:11:32.97:344,33,0	1/1:0,9:9:27.08:304,27,0	./.	0/0:2,0:2:0.47:0,0,1	1/1:3,18:21:30.71:393,31,0	1/1:0,17:17:48.14:553,48,0	1/1:1,7:8:15.93:178,16,0	1/1:4,15:19:39.12:453,39,0	1/1:1,8:9:24.96:278,25,0	1/1:2,18:20:51.15:602,51,0	1/1:0,22:22:40.44:499,40,0	1/1:0,9:9:27.08:323,27,0	1/1:3,11:14:33.57:385,34,0	1/1:5,15:20:47.53:496,48,0	1/1:1,10:11:30.92:333,31,0	1/1:0,13:13:39.12:463,39,0	1/1:0,3:3:9.03:106,9,0	1/1:1,2:3:6.02:70,6,0	1/1:5,7:12:15.99:176,16,0	1/1:2,24:26:40.45:499,40,0	./.	1/1:0,19:19:40.56:465,41,0	1/1:2,24:26:56.04:639,56,0	1/1:0,5:5:8.81:79,9,0	1/1:1,17:18:38.79:417,39,0	1/1:3,14:17:41.60:485,42,0	1/1:1,18:19:41.20:462,41,0	1/1:0,5:5:15.04:171,15,0
chr10	67002360	.	TA	T	10826.18	PASS	AC=50;AF=0.926;AN=54;BaseQRankSum=3.381;DP=366;FS=4.478;HRun=2;HaplotypeScore=467.1658;InbreedingCoeff=0.7102;MQ=39.15;MQ0=0;MQRankSum=-3.438;QD=30.07;ReadPosRankSum=1.859;VQSLOD=1.5743;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,8:8:17.88:174,18,0	1/1:0,13:13:36.12:452,36,0	0/0:3,0:2:6.01:0,6,69	0/0:3,0:3:6:0,6,62	1/1:1,19:20:51.02:591,51,0	1/1:1,20:21:54.12:660,54,0	1/1:1,8:9:21:241,21,0	1/1:6,12:18:36.05:435,36,0	1/1:0,13:13:39.12:488,39,0	1/1:1,17:17:48.12:591,48,0	1/1:2,27:29:65.95:752,66,0	1/1:1,10:11:21.07:262,21,0	1/1:1,7:8:18.06:225,18,0	1/1:4,10:14:33.02:389,33,0	1/1:0,13:13:33.10:413,33,0	1/1:0,16:16:42.07:506,42,0	1/1:0,1:1:3.01:37,3,0	1/1:0,3:3:9.03:115,9,0	1/1:1,4:5:12.04:148,12,0	1/1:0,25:25:63.20:790,63,0	./.	1/1:3,12:15:36.05:428,36,0	1/1:0,25:25:57.18:696,57,0	1/1:0,5:5:6.01:67,6,0	1/1:2,18:20:54.09:658,54,0	1/1:1,21:22:60.19:760,60,0	1/1:2,19:21:57.06:681,57,0	1/1:0,7:7:21.07:265,21,0
chr10	67002369	.	TC	T	11733.35	PASS	AC=50;AF=0.926;AN=54;BaseQRankSum=2.912;DP=390;FS=0.000;HRun=3;HaplotypeScore=481.0101;InbreedingCoeff=0.6838;MQ=42.62;MQ0=0;MQRankSum=-2.986;QD=30.72;ReadPosRankSum=0.828;VQSLOD=1.0343;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,6:8:11.98:117,12,0	1/1:1,13:14:39.12:462,39,0	0/0:3,0:2:2.99:0,3,24	0/0:5,0:5:6.01:0,6,68	1/1:1,20:21:56.97:579,57,0	1/1:2,19:21:60.01:641,60,0	1/1:0,7:7:21.06:245,21,0	1/1:1,11:12:30.09:359,30,0	1/1:0,16:16:48.09:544,48,0	1/1:4,17:20:51.11:598,51,0	1/1:2,28:30:81.10:873,81,0	1/1:0,14:14:42.09:468,42,0	1/1:0,10:10:30.09:344,30,0	1/1:0,13:13:39.11:451,39,0	1/1:0,14:14:42.08:473,42,0	1/1:1,16:17:47.97:496,48,0	1/1:0,2:2:6.02:70,6,0	1/1:0,4:4:12.04:141,12,0	1/1:1,7:8:24.05:270,24,0	1/1:2,27:29:81.12:902,81,0	./.	1/1:0,17:17:51.05:536,51,0	1/1:1,25:26:75.09:818,75,0	1/1:2,3:5:3.01:34,3,0	1/1:4,20:24:66.10:729,66,0	1/1:2,20:22:66.12:758,66,0	1/1:2,18:20:51.09:574,51,0	1/1:0,7:7:21.06:251,21,0
chr10	67002392	.	AG	A	12152.88	PASS	AB=0.778;AC=53;AF=0.981;AN=54;BaseQRankSum=1.631;DP=387;FS=4.050;HRun=4;HaplotypeScore=434.0936;InbreedingCoeff=-0.0366;MQ=48.11;MQ0=0;MQRankSum=-1.722;QD=31.40;ReadPosRankSum=1.722;VQSLOD=0.7993;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,2:2:3.01:36,3,0	1/1:1,14:15:42.08:478,42,0	1/1:0,2:2:6.02:72,6,0	0/1:5,2:7:7.93:63,0,8	1/1:3,17:20:51.15:604,51,0	1/1:1,14:15:42.13:500,42,0	1/1:1,4:5:12.04:142,12,0	1/1:1,7:8:21.06:251,21,0	1/1:1,16:17:48.15:572,48,0	1/1:1,22:23:66.20:787,66,0	1/1:2,29:31:84.25:998,84,0	1/1:1,12:13:36.11:431,36,0	1/1:1,11:12:33.10:392,33,0	1/1:2,14:16:42.13:498,42,0	1/1:3,11:14:33.10:392,33,0	1/1:1,12:13:36.11:429,36,0	1/1:0,2:2:6.02:72,6,0	1/1:0,3:3:9.03:108,9,0	1/1:3,10:13:30.09:359,30,0	1/1:1,33:34:96.18:1107,96,0	./.	1/1:1,17:18:51.10:592,51,0	1/1:1,21:22:60.18:714,60,0	1/1:1,5:6:9.03:108,9,0	1/1:2,25:27:75.23:891,75,0	1/1:3,18:21:54.17:647,54,0	1/1:1,21:22:63.19:748,63,0	1/1:2,4:6:15:163,15,0
chr10	67002463	.	AG	A	8244.67	PASS	AB=0.923;AC=53;AF=0.946;AN=56;BaseQRankSum=5.575;DP=438;FS=0.000;HRun=4;HaplotypeScore=268.9585;InbreedingCoeff=0.4920;MQ=67.98;MQ0=0;MQRankSum=-7.904;QD=19.68;ReadPosRankSum=4.712;VQSLOD=2.6951;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,10:11:29.86:230,30,0	1/1:1,8:9:23.90:186,24,0	0/1:11,1:12:10.06:10,0,205	0/0:18,1:19:5.13:0,5,365	1/1:4,23:27:59.55:471,60,0	1/1:1,10:11:29.89:232,30,0	1/1:2,6:8:17.91:135,18,0	1/1:4,16:20:51.08:509,51,0	1/1:5,20:25:56.74:449,57,0	1/1:6,21:26:62.96:617,63,0	1/1:2,21:23:53.60:392,54,0	1/1:3,7:10:20.14:145,20,0	1/1:0,9:9:26.77:195,27,0	1/1:2,9:11:26.89:206,27,0	1/1:1,15:16:44.78:337,45,0	1/1:0,7:7:20.95:170,21,0	1/1:2,9:11:26.92:213,27,0	1/1:2,4:6:14.97:126,15,0	1/1:1,8:9:24.06:252,24,0	1/1:6,31:37:89.67:731,90,0	1/1:1,7:8:18.42:150,18,0	1/1:1,22:23:62.70:500,63,0	1/1:1,15:16:41.45:302,41,0	1/1:3,5:8:5.62:48,6,0	1/1:7,20:27:62.74:486,63,0	1/1:2,17:19:51.07:491,51,0	1/1:3,23:26:68.81:583,69,0	1/1:0,3:3:9:78,9,0
chr10	67002470	.	A	AT	15639.36	PASS	AB=0.871;AC=54;AF=0.964;AN=56;BaseQRankSum=2.393;DP=458;FS=6.757;HRun=0;HaplotypeScore=220.7781;InbreedingCoeff=-0.0297;MQ=64.85;MQ0=0;MQRankSum=-7.799;QD=34.15;ReadPosRankSum=1.578;VQSLOD=3.7106;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,11:13:33.11:468,33,0	1/1:1,8:9:24.08:331,24,0	0/1:10,1:11:18.28:18,0,198	0/1:15,4:19:99:131,0,239	1/1:2,25:27:63.09:752,63,0	1/1:0,14:14:36.12:508,36,0	1/1:0,11:11:21.07:304,21,0	1/1:0,27:27:75.15:1058,75,0	1/1:1,24:25:65.03:883,65,0	1/1:3,21:23:63.21:926,63,0	1/1:0,23:23:60.18:760,60,0	1/1:0,9:9:24.07:329,24,0	1/1:0,10:10:30.10:418,30,0	1/1:0,11:11:33.11:454,33,0	1/1:0,17:17:48.16:661,48,0	1/1:0,8:8:24.08:326,24,0	1/1:0,13:13:36.12:515,36,0	1/1:1,4:5:15.05:220,15,0	1/1:1,10:11:33.11:497,33,0	1/1:0,38:38:99:1334,99,0	1/1:1,8:9:21.07:292,21,0	1/1:0,25:25:66.21:900,66,0	1/1:1,17:18:47.60:557,48,0	1/1:0,10:10:8.68:124,9,0	1/1:1,20:21:63.20:864,63,0	1/1:1,18:19:54.18:779,54,0	1/1:0,28:28:78.26:1103,78,0	1/1:0,3:3:9.03:127,9,0
chr10	67003201	.	T	TA	9089.35	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-11.373;DP=479;FS=1.401;HRun=8;HaplotypeScore=46.1436;InbreedingCoeff=0.9831;MQ=76.66;MQ0=0;MQRankSum=-1.471;QD=27.13;ReadPosRankSum=4.713;VQSLOD=5.0593;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:69.03:0,69,631	0/0:7,0:7:21.01:0,21,192	0/0:17,0:15:29.47:0,29,221	0/0:29,0:22:31.98:0,32,287	1/1:0,21:21:60.14:677,60,0	1/1:3,16:19:45.13:519,45,0	1/1:1,9:10:21.06:242,21,0	0/0:28,0:28:54:0,54,491	1/1:1,9:10:15.04:173,15,0	1/1:2,21:23:60.17:683,60,0	1/1:4,16:20:48.04:513,48,0	1/1:2,7:9:21.06:242,21,0	0/0:11,0:11:33:0,33,294	1/1:2,14:16:36.11:415,36,0	1/1:4,17:21:42.12:485,42,0	1/1:0,16:16:39.12:450,39,0	1/1:0,21:21:48.14:554,48,0	1/1:2,19:21:39.12:449,39,0	1/1:3,20:23:60.18:692,60,0	1/1:1,23:24:66.20:762,66,0	1/1:0,6:6:15.04:173,15,0	0/0:4,0:4:9:0,9,82	0/0:11,0:12:29.23:0,29,254	0/0:9,0:9:26.97:0,27,232	1/1:3,22:25:57.17:658,57,0	1/1:5,20:25:60.16:675,60,0	1/1:3,14:17:39.12:450,39,0	1/1:0,8:8:24.07:277,24,0
chr10	67004666	.	GTAAT	G	1006.51	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.480;DP=497;FS=0.000;HRun=0;HaplotypeScore=78.1691;InbreedingCoeff=0.9880;MQ=80.37;MQ0=0;MQRankSum=-0.004;QD=40.26;ReadPosRankSum=2.396;VQSLOD=3.8789;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:45.15:0,45,1201	0/0:6,0:6:18.06:0,18,485	0/0:9,0:9:27.07:0,27,667	0/0:15,0:15:35.98:0,36,923	1/1:0,25:25:59.82:1101,60,0	0/0:21,0:21:63.20:0,63,1643	0/0:17,0:17:48.16:0,48,1257	0/0:26,0:26:69.24:0,69,1827	0/0:15,0:15:45.15:0,45,1192	0/0:28,0:28:84.28:0,84,2185	0/0:24,0:24:72.23:0,72,1887	0/0:14,0:14:42.14:0,42,1123	0/0:16,0:16:48.16:0,48,1284	0/0:18,0:18:54.17:0,54,1378	0/0:14,0:14:36.12:0,36,948	0/0:13,0:13:39.13:0,39,1022	0/0:25,0:25:72.20:0,72,1826	0/0:14,0:14:39.13:0,39,1051	0/0:19,0:19:54.17:0,54,1349	0/0:25,0:25:72.25:0,72,1943	0/0:8,0:8:24.08:0,24,648	0/0:16,0:16:48.16:0,48,1237	0/0:20,0:20:57.20:0,57,1469	0/0:12,0:12:36.12:0,36,961	0/0:26,0:26:75.26:0,75,2022	0/0:24,0:24:66.23:0,66,1771	0/0:22,0:22:60.21:0,60,1618	0/0:10,0:10:30.07:0,30,675
chr10	67005090	.	C	CT	4825.24	PASS	AB=0.669;AC=39;AF=0.696;AN=56;BaseQRankSum=-3.411;DP=439;FS=1.268;HRun=13;HaplotypeScore=52.7722;InbreedingCoeff=0.6362;MQ=60.55;MQ0=4;MQRankSum=-0.993;QD=13.04;ReadPosRankSum=0.929;VQSLOD=4.9998;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,2:26:23.97:137,24,0	1/1:1,1:9:17.04:86,17,0	0/0:5,0:3:2.93:0,3,21	0/0:10,0:8:2.63:0,3,16	0/0:23,0:24:49.48:0,49,325	1/1:5,15:21:41.88:376,42,0	1/1:0,2:2:6.01:56,6,0	1/1:10,22:30:34.23:430,34,0	1/1:1,8:9:20.86:195,21,0	1/1:8,13:22:32.78:272,33,0	1/1:5,11:16:28.59:255,29,0	1/1:0,5:5:9.01:84,9,0	0/0:8,0:8:17.70:0,18,119	0/1:3,0:5:8.68:9,0,15	1/1:4,8:12:15.49:140,15,0	1/1:5,8:13:21.50:196,21,0	1/1:10,26:33:56.87:508,57,0	1/1:3,15:19:21.30:328,21,0	0/1:12,18:28:10.70:335,0,11	1/1:2,14:16:23.99:215,24,0	1/1:4,5:9:12.01:111,12,0	0/0:5,0:5:5.89:0,6,41	0/0:8,0:8:8.89:0,9,60	0/0:9,0:9:23.77:0,24,164	1/1:4,22:28:39.11:472,39,0	0/1:10,10:20:12.81:187,0,13	1/1:4,19:24:24.03:247,24,0	1/1:4,10:13:20.98:186,21,0
chr10	67006001	.	GT	G	4473.90	PASS	AB=0.709;AC=37;AF=0.661;AN=56;BaseQRankSum=2.499;DP=517;FS=0.906;HRun=14;HaplotypeScore=59.4093;InbreedingCoeff=0.5657;MQ=76.07;MQ0=2;MQRankSum=-0.789;QD=11.21;ReadPosRankSum=4.166;VQSLOD=4.6137;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:3,0:17:34.56:0,35,208	0/1:3,2:13:15.14:15,0,81	0/0:24,0:15:9.76:0,10,57	0/0:23,0:18:16.90:0,17,94	1/1:5,21:27:37.62:372,38,0	0/1:7,13:20:25.97:135,0,26	1/1:2,12:14:35.70:247,36,0	0/1:33,3:36:10.24:10,0,378	0/1:3,9:14:7.59:156,0,8	1/1:10,16:27:5.21:302,5,0	0/1:5,14:21:19.03:160,0,19	1/1:3,5:8:14.82:103,15,0	0/0:8,0:9:23.85:0,24,205	1/1:0,11:11:23.81:164,24,0	1/1:2,23:26:64.48:437,64,0	1/1:2,9:11:23.77:164,24,0	1/1:10,15:26:12.77:225,13,0	1/1:3,13:16:34.77:232,35,0	1/1:4,11:16:34.70:229,35,0	1/1:1,14:20:51.81:315,52,0	1/1:2,12:14:32.69:226,33,0	0/0:17,0:19:32.85:0,33,287	0/0:12,1:14:21.17:0,21,307	0/0:11,0:11:24.02:0,24,219	1/1:5,18:23:25.68:322,26,0	1/1:7,15:22:22.66:298,23,0	1/1:10,20:30:28.46:342,28,0	1/1:0,3:3:2.98:21,3,0
chr10	67006315	.	T	TA	5491.23	PASS	AB=0.901;AC=39;AF=0.696;AN=56;BaseQRankSum=-3.878;DP=571;FS=0.416;HRun=13;HaplotypeScore=70.4248;InbreedingCoeff=0.7457;MQ=79.51;MQ0=2;MQRankSum=-1.054;QD=13.14;ReadPosRankSum=-0.374;VQSLOD=4.9199;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:34:64.02:0,64,433	0/0:10,0:10:20.82:0,21,144	0/0:21,0:17:11.54:0,12,43	0/1:20,0:15:31.67:35,0,32	1/1:11,0:32:52.31:279,52,0	0/1:9,4:13:2.66:110,0,3	1/1:5,14:20:18.30:300,18,0	0/0:22,1:24:30.65:0,31,348	1/1:5,11:16:24.03:223,24,0	1/1:7,15:22:15.44:280,15,0	1/1:7,16:23:44.85:379,45,0	1/1:2,13:15:27.02:246,27,0	0/0:20,0:20:10.33:0,10,200	1/1:6,17:23:32.93:292,33,0	1/1:6,17:23:9.45:230,9,0	1/1:6,18:25:17.48:327,17,0	1/1:5,20:25:48.05:446,48,0	1/1:5,13:18:21.39:330,21,0	1/1:4,12:16:36.89:328,37,0	1/1:10,19:29:4.17:289,4,0	1/1:4,19:23:41.99:377,42,0	0/0:22,0:22:38.58:0,39,267	0/1:12,1:15:3.07:3,0,110	0/0:19,0:21:24.96:0,25,276	1/1:0,12:13:26.87:237,27,0	1/1:5,15:20:33.03:303,33,0	1/1:11,12:23:29.88:394,30,0	1/1:0,4:4:9.01:84,9,0
chr10	67008496	.	T	TA	7198.42	PASS	AB=0.676;AC=37;AF=0.661;AN=56;BaseQRankSum=-10.498;DP=579;FS=0.770;HRun=11;HaplotypeScore=59.9215;InbreedingCoeff=0.7485;MQ=78.73;MQ0=1;MQRankSum=-2.879;QD=18.36;ReadPosRankSum=0.963;VQSLOD=5.8782;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:89.56:0,90,690	0/1:6,1:7:12.51:13,0,98	0/0:21,1:20:13.17:0,13,174	0/0:23,0:18:23.60:0,24,163	0/0:35,0:35:72.71:0,73,575	1/1:3,15:18:21.54:375,22,0	0/1:5,9:15:13.56:225,0,14	1/1:11,20:30:60.03:583,60,0	1/1:3,20:23:57.11:574,57,0	1/1:9,23:32:48.90:677,49,0	1/1:6,19:25:51.10:517,51,0	1/1:2,16:18:12.87:312,13,0	0/0:18,0:18:44.82:0,45,348	1/1:6,8:14:9.02:91,9,0	1/1:5,15:20:18.88:358,19,0	1/1:1,13:15:38.91:380,39,0	0/1:3,13:16:7.40:296,0,7	1/1:1,16:17:21.85:403,22,0	1/1:2,11:13:30.02:289,30,0	1/1:10,12:22:7.26:242,7,0	1/1:4,13:17:30.06:305,30,0	0/0:17,0:17:44.81:0,45,344	0/0:15,0:15:44.83:0,45,348	0/0:18,0:20:48.90:0,49,360	1/1:1,14:16:26.89:258,27,0	1/1:7,15:22:36.17:418,36,0	1/1:10,20:30:16.67:532,17,0	1/1:9,11:21:36.37:351,36,0
chr10	67010667	.	A	AAACAAC	1827.42	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=0.351;DP=472;FS=9.065;HRun=0;HaplotypeScore=97.7404;InbreedingCoeff=0.6383;MQ=65.84;MQ0=0;MQRankSum=-4.963;QD=57.11;ReadPosRankSum=-1.540;VQSLOD=3.0785;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:60.21:0,60,1336	0/0:6,0:6:18.06:0,18,401	0/0:9,0:9:21.06:0,21,374	0/1:5,0:4:5.07:5,0,31	1/1:3,23:27:63.04:1921,63,0	0/0:19,0:19:51.17:0,51,1119	0/0:12,0:12:36.11:0,36,762	0/0:28,0:28:69.21:0,69,1385	0/0:17,0:17:42.14:0,42,936	0/0:24,0:24:60.09:0,60,1238	0/0:29,0:29:78.22:0,78,1650	0/0:17,0:17:45.15:0,45,963	0/0:9,0:9:24.08:0,24,535	0/0:8,0:8:21.07:0,21,454	0/0:16,0:16:45.14:0,45,923	0/0:15,0:15:45.15:0,45,1003	0/0:29,0:29:72.18:0,72,1474	0/0:16,0:16:42.14:0,42,912	0/0:18,0:18:54.17:0,54,1129	0/0:21,0:21:51.14:0,51,955	0/0:11,0:10:30.09:0,30,625	0/0:16,0:16:39.12:0,39,827	0/0:21,0:20:54.17:0,54,1102	0/0:4,0:4:12.04:0,12,267	0/0:20,0:20:48.16:0,48,1030	0/0:23,0:23:54.18:0,54,1150	0/0:26,0:26:72.25:0,72,1604	0/0:3,0:3:6.49:0,6,133
chr10	67010953	.	A	ATTTTT	28276.32	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-8.004;DP=422;FS=3.463;HRun=2;HaplotypeScore=60.5716;InbreedingCoeff=0.9153;MQ=60.96;MQ0=0;MQRankSum=-6.980;QD=77.90;ReadPosRankSum=0.612;VQSLOD=4.7012;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,25:28:75.26:2305,75,0	1/1:1,2:3:9.03:265,9,0	0/0:7,0:7:5.52:0,6,302	0/0:12,0:11:27.09:0,27,517	1/1:5,15:22:51.13:1491,51,0	1/1:3,18:21:57.20:1753,57,0	1/1:2,10:14:24.08:735,24,0	1/1:9,25:36:99:2871,99,0	1/1:2,11:14:36.12:1123,36,0	1/1:1,13:15:45.15:1305,45,0	1/1:2,17:22:60.21:1761,60,0	1/1:3,7:11:21.07:649,21,0	0/0:11,0:11:33.11:0,33,683	1/1:2,6:8:21.07:632,21,0	1/1:1,11:13:36.12:1142,36,0	1/1:3,9:12:27.09:856,27,0	1/1:6,11:18:42.14:1214,42,0	1/1:0,8:8:24.08:761,24,0	1/1:6,14:21:57.18:1639,57,0	1/1:5,19:25:72.20:2090,72,0	1/1:2,11:13:30.10:951,30,0	0/0:4,0:4:9.03:0,9,186	0/0:12,0:12:33.09:0,33,645	0/0:12,0:12:33.10:0,33,635	1/1:2,14:16:42.14:1326,42,0	1/1:0,17:19:57.18:1711,57,0	1/1:1,19:21:51.18:1602,51,0	1/1:0,1:1:3.01:95,3,0
chr10	67011160	.	A	AC	553.19	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-5.342;DP=614;FS=6.638;HRun=2;HaplotypeScore=89.5968;InbreedingCoeff=0.9930;MQ=59.79;MQ0=1;MQRankSum=2.557;QD=29.12;ReadPosRankSum=0.338;VQSLOD=2.7841;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,114,1412	0/0:8,0:8:21.07:0,21,260	0/0:21,0:17:51.12:0,51,611	0/0:28,0:25:56.02:0,56,814	1/1:2,17:19:45.15:648,45,0	0/0:13,0:13:36.11:0,36,446	0/0:24,0:24:69.20:0,69,843	0/0:37,0:37:99:0,111,1376	0/0:21,0:21:57.16:0,57,693	0/0:17,0:17:51.16:0,51,631	0/0:20,0:20:60.18:0,60,731	0/0:21,0:21:63.20:0,63,781	0/0:16,0:16:45.14:0,45,558	0/0:17,0:17:48.15:0,48,595	0/0:25,0:25:69.22:0,69,855	0/0:21,0:21:57.17:0,57,694	0/0:33,0:33:96.30:0,96,1190	0/0:28,0:28:78.23:0,78,953	0/0:29,0:29:75.20:0,75,913	0/0:17,0:17:51.13:0,51,617	0/0:42,0:42:99:0,120,1487	0/0:11,0:11:30.09:0,30,372	0/0:17,0:17:51.16:0,51,631	0/0:28,0:28:78.24:0,78,967	0/0:11,0:11:33.10:0,33,409	0/0:19,0:19:45.14:0,45,558	0/0:22,0:22:66.21:0,66,818	0/0:8,0:8:24.08:0,24,298
chr10	67012693	.	C	CTT	4952.21	PASS	AB=0.701;AC=41;AF=0.732;AN=56;BaseQRankSum=-1.943;DP=589;FS=0.646;HRun=15;HaplotypeScore=89.7542;InbreedingCoeff=0.2467;MQ=74.15;MQ0=2;MQRankSum=-1.430;QD=9.20;ReadPosRankSum=-4.651;VQSLOD=1.8377;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,0:24:14.22:48,14,0	0/1:0,0:7:6.88:7,0,13	0/1:15,0:13:5.94:7,0,6	0/0:17,0:15:9.15:0,9,46	1/1:32,0:32:51:445,51,0	1/1:5,17:28:28.38:271,28,0	1/1:4,6:11:9.02:104,9,0	1/1:17,0:32:11.42:154,11,0	0/1:2,7:15:7.53:85,0,8	1/1:6,13:21:39.91:423,40,0	1/1:8,11:22:16.33:335,16,0	1/1:4,8:13:6.89:64,7,0	0/1:15,0:16:6.06:6,0,89	1/1:5,10:19:17.37:180,17,0	0/1:5,15:23:10.95:177,0,11	0/1:5,13:18:14.98:67,0,15	1/1:6,20:27:15.05:190,15,0	1/1:1,3:15:21.71:168,22,0	1/1:9,4:23:18.58:338,19,0	1/1:6,18:30:62.06:559,62,0	0/1:4,19:27:1.26:348,0,1	0/0:13,0:16:19.66:0,20,129	0/0:16,0:18:14.37:0,14,125	0/1:8,1:14:26.97:27,0,63	0/1:9,13:23:8.72:137,0,9	1/1:18,2:23:34.36:297,34,0	1/1:7,16:31:16.05:239,16,0	1/1:9,9:26:9.79:276,10,0
chr10	67012810	.	A	AT	633.34	PASS	AB=0.941;AC=5;AF=0.089;AN=56;BaseQRankSum=-4.022;DP=512;FS=4.441;HRun=10;HaplotypeScore=54.6864;InbreedingCoeff=0.3480;MQ=71.59;MQ0=0;MQRankSum=-0.181;QD=10.73;ReadPosRankSum=-0.302;VQSLOD=2.4845;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:38.92:0,39,320	0/1:7,0:7:7.74:8,0,127	0/1:10,1:12:4.88:5,0,132	0/0:9,0:10:25.78:0,26,188	1/1:4,27:31:52.03:723,52,0	0/0:35,0:35:99:0,102,837	0/0:14,0:14:29.91:0,30,243	0/0:33,0:33:68.87:0,69,563	0/0:14,0:14:35.96:0,36,296	0/0:22,0:22:44.91:0,45,369	0/0:22,1:23:18.94:0,19,362	0/0:27,0:27:74.89:0,75,616	0/0:21,0:22:61.95:0,62,496	0/1:8,1:9:8.04:8,0,145	0/0:12,0:12:26.97:0,27,222	0/0:14,0:14:41.94:0,42,342	0/0:23,0:23:47.92:0,48,394	0/0:12,0:12:11.91:0,12,203	0/0:28,0:28:68.90:0,69,567	0/0:22,0:22:44.90:0,45,369	0/0:7,0:7:17.98:0,18,148	0/0:19,0:20:52.97:0,53,425	0/0:17,0:17:41.93:0,42,342	0/0:9,0:9:26.97:0,27,222	0/0:15,0:15:41.95:0,42,345	0/0:16,0:17:40.97:0,41,326	0/0:22,0:23:2.48:0,2,303	0/0:17,0:17:50.93:0,51,417
chr10	67017813	.	T	TA	1145.51	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-4.505;DP=591;FS=6.016;HRun=1;HaplotypeScore=91.0012;InbreedingCoeff=0.9071;MQ=69.87;MQ0=0;MQRankSum=-0.529;QD=28.64;ReadPosRankSum=0.068;VQSLOD=3.1013;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:63.13:0,63,754	0/0:8,0:8:24.08:0,24,311	0/0:8,0:8:13.24:0,13,145	0/0:9,0:9:8.93:0,9,94	1/1:3,37:40:99:1240,100,0	0/0:22,0:22:57.16:0,57,678	0/0:11,0:11:16.05:0,16,280	0/0:28,0:28:72.19:0,72,874	0/0:23,0:23:54.10:0,54,594	0/0:31,0:31:85.67:0,86,999	0/0:28,0:28:68.81:0,69,772	0/0:19,0:19:51.04:0,51,591	0/0:21,0:21:63.17:0,63,778	0/0:13,0:13:25.46:0,25,343	0/0:15,0:15:36.99:0,37,430	0/0:20,0:20:39.79:0,40,578	0/0:25,0:25:63.31:0,63,792	0/0:15,0:15:42.04:0,42,484	0/0:19,0:19:48.12:0,48,570	0/0:36,0:36:99:0,99,1114	0/0:11,0:11:24.06:0,24,283	0/0:18,0:18:41.93:0,42,548	0/0:27,0:27:72.11:0,72,863	0/0:16,0:16:48.02:0,48,564	0/0:30,0:30:81.20:0,81,939	0/0:30,0:30:74.55:0,75,840	0/0:34,0:34:95.60:0,96,1091	0/0:9,0:9:27.08:0,27,325
chr10	67017899	.	A	AT	8364.69	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-12.162;DP=495;FS=10.610;HRun=9;HaplotypeScore=49.2385;InbreedingCoeff=0.9731;MQ=60.04;MQ0=0;MQRankSum=-0.201;QD=24.75;ReadPosRankSum=3.560;VQSLOD=5.0708;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:68.95:0,69,599	0/0:6,0:6:18:0,18,156	0/0:11,0:8:23.95:0,24,200	0/0:5,0:4:12:0,12,104	1/1:9,15:24:28.02:512,28,0	1/1:4,18:22:42.08:452,42,0	1/1:2,11:13:30.08:332,30,0	0/0:42,0:42:89.94:0,90,779	1/1:0,14:14:36.10:398,36,0	1/1:6,17:23:54.11:575,54,0	1/1:2,17:19:48.13:531,48,0	1/1:1,8:9:24.06:266,24,0	0/0:14,1:15:5.81:0,6,279	1/1:0,14:15:27.07:293,27,0	1/1:2,16:18:45.12:498,45,0	1/1:0,12:12:33.09:365,33,0	1/1:3,21:24:17.35:632,17,0	1/1:0,10:10:27.07:299,27,0	1/1:5,12:17:34.39:423,34,0	1/1:1,26:27:66.11:704,66,0	1/1:2,11:13:24.50:253,24,0	0/0:14,0:15:32.02:0,32,266	0/0:13,0:13:32.98:0,33,286	0/0:18,0:19:44.02:0,44,371	1/1:4,13:17:33.09:365,33,0	1/1:4,19:23:51.10:538,51,0	1/1:6,21:27:60.16:663,60,0	1/1:2,8:10:24.06:265,24,0
chr10	67018974	.	A	AGTGTGT	4944.28	PASS	AC=36;AF=0.692;AN=52;BaseQRankSum=5.653;DP=474;FS=23.113;HRun=0;HaplotypeScore=161.4766;InbreedingCoeff=0.7387;MQ=52.28;MQ0=8;MQRankSum=-7.491;QD=16.21;ReadPosRankSum=1.413;VQSLOD=3.0160;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:14,8:23:13.16:446,13,0	1/1:6,0:10:9.30:236,9,0	0/0:22,0:8:9.03:0,9,147	0/0:8,0:4:3.01:0,3,35	0/0:30,0:29:45.06:0,45,737	1/1:14,0:13:7.58:160,8,0	1/1:11,0:11:9.03:162,9,0	0/0:26,0:31:4:0,4,8	./.	1/1:22,0:20:12.04:256,12,0	1/1:23,0:21:6.02:156,6,0	1/1:13,0:13:3.01:79,3,0	0/0:12,0:12:27.09:0,27,529	1/1:9,0:9:6.47:104,6,0	1/1:14,0:12:6:102,6,0	1/1:13,0:10:6.91:159,7,0	1/1:22,0:20:9.01:182,9,0	1/1:10,0:10:6.02:118,6,0	1/1:14,0:13:20.28:438,20,0	1/1:27,0:25:3.01:78,3,0	./.	0/0:13,0:13:21.06:0,21,397	0/0:19,0:19:36.11:0,36,707	0/0:15,0:15:24.08:0,24,496	1/1:21,0:21:15.04:338,15,0	1/1:23,0:22:42.13:1031,42,0	1/1:28,0:26:26.11:641,26,0	1/1:7,0:7:11.53:258,12,0
chr10	67019554	.	GA	G	10843.58	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=11.378;DP=650;FS=5.228;HRun=9;HaplotypeScore=63.8610;InbreedingCoeff=0.9977;MQ=71.54;MQ0=0;MQRankSum=-1.733;QD=23.42;ReadPosRankSum=3.774;VQSLOD=5.8042;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:84.25:0,84,969	0/0:10,0:10:30.07:0,30,335	0/0:12,0:11:24.06:0,24,262	0/0:9,0:9:16.78:0,17,205	1/1:4,32:36:93.04:851,93,0	1/1:2,27:29:81.04:741,81,0	1/1:2,12:14:33.02:302,33,0	0/0:36,0:36:96.29:0,96,1107	1/1:2,19:21:51.02:467,51,0	1/1:2,30:32:90.05:824,90,0	1/1:2,23:25:63.02:577,63,0	1/1:2,16:18:45.02:412,45,0	0/0:14,0:14:36.11:0,36,415	1/1:2,19:21:48.02:439,48,0	1/1:1,18:19:45.02:412,45,0	1/1:4,16:20:42.02:384,42,0	1/1:1,26:28:74.07:665,74,0	1/1:0,12:12:36.02:330,36,0	1/1:2,25:27:75.02:679,75,0	1/1:3,24:27:63.01:577,63,0	1/1:3,10:13:30.01:275,30,0	0/0:18,0:18:48.13:0,48,545	0/0:35,0:35:99:0,99,1134	0/0:16,0:16:39.12:0,39,450	1/1:3,21:24:60.02:549,60,0	1/1:2,34:36:99:933,102,0	1/1:5,38:43:99:988,108,0	1/1:2,16:18:48.02:439,48,0
chr10	67019835	.	CTTGTTGTTG	C	16363.14	PASS	AB=0.778;AC=41;AF=0.732;AN=56;BaseQRankSum=9.629;DP=750;FS=0.846;HRun=0;HaplotypeScore=216.2642;InbreedingCoeff=0.8272;MQ=57.47;MQ0=4;MQRankSum=-10.935;QD=31.05;ReadPosRankSum=2.514;VQSLOD=4.5670;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:15,0:21:10.59:173,0,11	1/1:4,0:9:15.05:314,15,0	0/0:35,0:27:26.12:0,26,898	0/0:22,0:19:21.07:0,21,779	0/0:20,0:39:81.23:0,81,2679	1/1:7,15:22:39.13:1068,39,0	1/1:17,7:25:17.09:476,17,0	1/1:37,3:40:9.02:180,9,0	1/1:7,19:27:48.12:1243,48,0	1/1:19,14:34:45.11:1037,45,0	1/1:11,12:23:24.08:632,24,0	1/1:10,24:34:57.19:1570,57,0	0/0:35,0:36:78.20:0,78,3113	1/1:10,18:28:39.13:1078,39,0	1/1:9,25:34:66.23:1825,66,0	1/1:15,26:41:66.23:1824,66,0	1/1:13,7:20:9.03:249,9,0	1/1:6,3:9:6.02:166,6,0	1/1:16,5:20:14.99:293,15,0	1/1:15,13:28:30.10:829,30,0	1/1:20,6:26:6.02:109,6,0	0/0:31,0:31:60.21:0,60,2604	0/0:26,0:28:54.19:0,54,2180	0/0:32,0:32:72.22:0,72,2909	1/1:5,13:18:33.11:912,33,0	1/1:11,16:27:45.13:1150,45,0	1/1:12,18:30:42.14:1152,42,0	1/1:7,3:10:3.01:83,3,0
chr10	67020865	.	T	TTG	1661.53	PASS	AB=0.962;AC=37;AF=0.712;AN=52;BaseQRankSum=-2.002;DP=481;FS=18.461;HRun=0;HaplotypeScore=83.7188;InbreedingCoeff=0.2036;MQ=62.82;MQ0=14;MQRankSum=1.621;QD=4.71;ReadPosRankSum=-1.929;VQSLOD=0.9796;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:17,0:20:9.38:9,0,59	1/1:2,1:3:3.01:44,3,0	./.	./.	0/0:14,0:17:8.48:0,8,41	1/1:18,0:19:9.02:103,9,0	1/1:17,0:16:2.92:18,3,0	1/1:21,0:21:1.25:3,1,0	0/1:29,1:30:45.69:149,0,46	1/1:17,0:16:11.94:115,12,0	1/1:10,2:11:13.82:132,14,0	1/1:12,2:14:9:109,9,0	0/0:10,0:12:11.86:0,12,110	0/1:9,0:10:6.88:38,0,7	1/1:14,1:15:9:93,9,0	0/0:11,0:13:8.99:0,9,43	0/1:17,0:17:22.98:30,0,23	0/1:14,3:16:19.87:98,0,20	1/1:15,0:14:3.01:41,3,0	1/1:10,1:11:18.03:213,18,0	1/1:21,0:21:5.99:50,6,0	0/1:18,0:18:22.46:22,0,165	0/0:16,0:17:14.27:0,14,137	0/1:12,0:12:8.49:14,0,8	1/1:9,3:12:18.04:228,18,0	1/1:23,0:23:12.47:135,12,0	1/1:14,0:14:8.95:85,9,0	1/1:12,1:14:9:93,9,0
chr10	67020932	.	ATT	A	3766.70	PASS	AB=0.588;AC=37;AF=0.661;AN=56;BaseQRankSum=-2.352;DP=430;FS=1.459;HRun=15;HaplotypeScore=72.4482;InbreedingCoeff=0.8577;MQ=69.37;MQ0=1;MQRankSum=-0.029;QD=14.05;ReadPosRankSum=3.298;VQSLOD=3.0015;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:6,2:20:21.39:21,0,87	0/0:1,0:4:7.49:0,7,26	0/0:31,1:17:9.23:0,9,299	0/0:21,0:11:14.88:0,15,137	0/0:6,0:25:70.38:0,70,746	1/1:0,10:11:23.74:197,24,0	1/1:4,15:20:29.68:304,30,0	0/0:16,0:19:50.57:0,51,594	1/1:6,10:18:29.61:247,30,0	1/1:3,13:16:35.87:311,36,0	1/1:5,7:12:19.21:176,19,0	1/1:4,8:14:11.52:135,12,0	0/0:15,0:15:42.06:0,42,490	1/1:2,9:11:20.97:185,21,0	1/1:7,11:18:25.68:258,26,0	1/1:4,10:14:17.85:158,18,0	1/1:4,8:14:17.57:182,18,0	1/1:1,4:5:8.98:79,9,0	1/1:5,11:17:18.53:243,19,0	1/1:5,11:16:31.66:288,32,0	1/1:2,8:12:20.58:214,21,0	0/0:13,0:13:6.82:0,7,343	0/0:14,0:15:38.60:0,39,474	0/0:13,0:16:25.93:0,26,285	1/1:6,11:17:24.32:225,24,0	1/1:4,10:14:28.24:256,28,0	1/1:1,9:10:16.29:156,16,0	1/1:3,6:9:14.96:132,15,0
chr10	67021162	.	G	GGGA	737.49	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=0.580;DP=540;FS=0.000;HRun=0;HaplotypeScore=83.8360;InbreedingCoeff=0.9874;MQ=78.62;MQ0=0;MQRankSum=-2.393;QD=35.12;ReadPosRankSum=1.144;VQSLOD=4.1641;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:60.18:0,60,958	0/0:8,0:8:24.02:0,24,324	0/0:14,0:14:41.89:0,42,550	0/0:20,0:20:46.64:0,47,678	1/1:2,17:21:42.08:832,42,0	0/0:22,0:22:57.14:0,57,895	0/0:26,0:26:75.24:0,75,1236	0/0:26,0:26:70.33:0,70,970	0/0:21,0:21:63.22:0,63,1057	0/0:22,0:22:57.18:0,57,908	0/0:22,0:22:51.08:0,51,793	0/0:26,0:26:75.26:0,75,1261	0/0:11,0:11:33.11:0,33,548	0/0:16,0:16:48.15:0,48,777	0/0:22,0:22:57.18:0,57,910	0/0:20,0:20:48.16:0,48,807	0/0:35,0:35:99:0,102,1590	0/0:9,0:9:18.06:0,18,303	0/0:9,0:9:27.07:0,27,426	0/0:20,0:20:54.15:0,54,877	0/0:33,0:33:93.25:0,93,1477	0/0:16,0:16:42.14:0,42,705	0/0:16,0:16:36.05:0,36,540	0/0:17,0:17:51.16:0,51,833	0/0:14,0:14:36.12:0,36,605	0/0:27,0:27:75.20:0,75,1116	0/0:17,0:17:48.08:0,48,712	0/0:9,0:9:27.05:0,27,399
chr10	67021285	.	T	TA	10451.79	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-10.171;DP=458;FS=4.147;HRun=1;HaplotypeScore=41.1388;InbreedingCoeff=0.9953;MQ=74.97;MQ0=0;MQRankSum=-3.477;QD=36.29;ReadPosRankSum=3.685;VQSLOD=4.6374;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:60.09:0,60,721	0/0:7,0:7:18.05:0,18,218	0/0:15,0:15:36.11:0,36,447	0/0:5,0:5:14.99:0,15,172	0/0:23,0:23:57.03:0,57,661	1/1:0,27:27:60.13:823,60,0	1/1:0,11:11:27.09:382,27,0	0/0:29,0:29:81.19:0,81,969	1/1:0,17:17:45.05:589,45,0	1/1:1,17:18:51.15:686,51,0	1/1:0,9:9:24.03:315,24,0	1/1:1,12:13:33.11:467,33,0	0/0:14,0:14:42.08:0,42,496	1/1:1,10:11:29.88:371,30,0	1/1:0,14:14:36.12:509,36,0	1/1:1,11:12:33.07:442,33,0	1/1:0,23:23:60.20:845,60,0	1/1:0,13:13:39.09:526,39,0	1/1:1,10:11:27.08:366,27,0	1/1:0,20:20:54.02:693,54,0	1/1:0,9:9:23.99:314,24,0	0/0:16,0:16:45.08:0,45,533	0/0:21,0:21:57.15:0,57,717	0/0:16,0:16:45.15:0,45,581	1/1:1,19:20:54.15:742,54,0	1/1:0,24:24:72.22:986,72,0	1/1:1,22:24:63.21:886,63,0	1/1:0,12:12:36.12:509,36,0
chr10	67021615	.	AACAC	A	2559.13	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=4.120;DP=470;FS=1.349;HRun=0;HaplotypeScore=139.9882;InbreedingCoeff=0.8855;MQ=53.99;MQ0=18;MQRankSum=-3.205;QD=10.57;ReadPosRankSum=2.649;VQSLOD=3.3298;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:13.37:0,13,91	0/0:3,0:3:5.97:0,6,48	0/0:59,0:23:14.16:0,14,220	0/0:63,0:18:24.02:0,24,389	0/0:6,0:8:2.99:0,3,24	1/1:7,0:7:8.40:47,8,0	1/1:17,0:17:14.77:111,15,0	0/0:20,0:16:27.04:0,27,425	1/1:11,0:11:8.81:54,9,0	1/1:7,0:6:18.02:220,18,0	1/1:13,1:14:17.86:191,18,0	1/1:16,0:16:20.75:173,21,0	0/0:12,0:12:15.05:0,15,333	1/1:17,1:18:14.33:91,14,0	1/1:13,0:12:14.65:91,15,0	1/1:17,0:16:20.04:171,20,0	1/1:10,0:10:14.54:123,15,0	1/1:11,0:10:8.97:138,9,0	1/1:14,0:11:17.73:121,18,0	1/1:12,0:12:15.42:130,15,0	1/1:25,0:23:23.79:260,24,0	0/0:9,0:9:18.03:0,18,239	0/0:9,0:8:15.03:0,15,312	0/0:25,0:25:47.59:0,48,890	1/1:9,0:9:17.68:177,18,0	1/1:16,0:16:38.71:379,39,0	1/1:9,2:11:16.69:192,17,0	1/1:11,0:10:7.53:101,8,0
chr10	67021640	.	ACT	A	1411.23	PASS	AB=0.989;AC=32;AF=0.571;AN=56;BaseQRankSum=4.114;DP=445;FS=1.920;HRun=0;HaplotypeScore=124.6111;InbreedingCoeff=0.3484;MQ=42.64;MQ0=24;MQRankSum=-4.519;QD=5.62;ReadPosRankSum=5.087;VQSLOD=2.8135;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:23,6:27:32.61:376,33,0	1/1:2,2:3:9.02:106,9,0	0/0:40,0:10:17.39:0,17,94	0/0:67,0:19:11.32:0,11,240	1/1:10,0:10:2.61:24,3,0	1/1:10,0:9:10.44:53,10,0	1/1:12,0:12:11.55:72,12,0	0/0:22,0:16:29.47:0,29,537	1/1:7,0:7:5.71:69,6,0	0/1:8,0:8:22.03:22,0,24	1/1:11,0:10:7.93:56,8,0	0/1:11,0:11:4.46:62,0,4	0/0:12,0:12:26.71:0,27,320	0/1:12,0:12:3.15:57,0,3	1/1:12,0:11:10.88:103,11,0	0/1:12,0:11:13.37:63,0,13	1/1:14,0:12:10.29:92,10,0	0/0:5,0:4:3.33:0,3,8	0/1:18,0:11:45.11:45,0,77	1/1:8,0:8:2.77:19,3,0	1/1:22,0:18:6.22:81,6,0	0/0:7,0:6:18.03:0,18,238	0/0:9,0:9:18:0,18,274	0/0:29,0:29:35.49:0,35,762	0/1:13,0:13:8.14:48,0,8	0/1:19,0:17:2.37:135,0,2	0/1:9,1:9:11.51:44,0,12	1/1:9,0:8:11.05:69,11,0
chr10	67021642	.	TCA	T	3786	PASS	AB=0.882;AC=41;AF=0.732;AN=56;BaseQRankSum=6.579;DP=439;FS=1.946;HRun=0;HaplotypeScore=114.8289;InbreedingCoeff=0.6851;MQ=41.39;MQ0=25;MQRankSum=-3.610;QD=11.83;ReadPosRankSum=1.907;VQSLOD=3.1732;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:26:19.77:131,20,0	1/1:4,0:3:5.93:45,6,0	0/0:37,0:9:0.19:0,0,92	0/1:64,0:18:4.63:5,0,186	0/1:8,2:10:0:0,0,0	1/1:5,5:9:11.99:125,12,0	1/1:5,7:12:14.94:168,15,0	0/0:25,0:19:50.22:0,50,700	1/1:4,3:7:14.41:159,14,0	1/1:6,2:8:23.58:207,24,0	1/1:7,4:10:17.95:171,18,0	1/1:6,4:10:17.33:186,17,0	0/0:12,0:12:23.58:0,24,344	1/1:5,7:12:23.56:227,24,0	1/1:4,8:11:20.89:252,21,0	1/1:7,5:11:20.31:209,20,0	1/1:8,6:12:20.68:235,21,0	1/1:5,0:4:8.88:65,9,0	0/1:13,3:10:48.09:144,0,48	1/1:5,2:7:14.95:130,15,0	1/1:17,5:18:23.72:268,24,0	0/0:7,0:6:12.02:0,12,180	0/0:9,0:9:18.06:0,18,316	0/0:29,0:29:51.49:0,51,887	1/1:6,7:13:27.41:273,27,0	1/1:9,10:17:47.84:511,48,0	1/1:6,4:9:3.71:125,4,0	1/1:8,2:8:14.91:150,15,0
chr10	67021644	.	A	ACT	1517.91	PASS	AB=1.000;AC=34;AF=0.630;AN=54;BaseQRankSum=5.797;DP=432;FS=2.204;HRun=0;HaplotypeScore=119.6781;InbreedingCoeff=0.5679;MQ=41.35;MQ0=26;MQRankSum=-4.249;QD=5.46;ReadPosRankSum=0.883;VQSLOD=3.3733;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:26:9.92:0,10,169	0/0:4,0:3:4.52:0,5,34	0/0:35,0:8:2.89:0,3,16	0/1:63,0:15:5.07:5,0,35	0/1:9,0:9:0:0,0,0	1/1:9,1:9:10.10:72,10,0	1/1:12,0:12:8.31:38,8,0	0/0:25,0:19:36.03:0,36,405	1/1:6,1:7:12.56:84,13,0	1/1:9,0:8:11.17:115,11,0	1/1:10,0:9:5.85:17,6,0	1/1:9,1:10:3.85:89,4,0	0/0:12,0:12:26.82:0,27,269	1/1:11,0:11:7.62:178,8,0	1/1:12,0:11:20.02:191,20,0	1/1:11,1:11:9.92:51,10,0	1/1:13,1:12:14.48:126,14,0	./.	0/1:16,0:11:37:39,0,37	1/1:7,0:7:3.61:12,4,0	1/1:23,0:19:11.58:70,12,0	0/0:5,0:4:8.92:0,9,61	0/0:9,0:9:18.01:0,18,197	0/0:31,0:31:47.62:0,48,534	1/1:12,1:13:20.82:222,21,0	1/1:19,0:18:32.51:279,33,0	0/1:10,0:9:47.22:47,0,57	1/1:10,0:8:7.73:64,8,0
chr10	67021706	.	ACTCTCTCT	A	762.97	PASS	AB=0.929;AC=23;AF=0.442;AN=52;BaseQRankSum=4.795;DP=409;FS=3.543;HRun=0;HaplotypeScore=114.3096;InbreedingCoeff=0.3094;MQ=32.70;MQ0=56;MQRankSum=-2.851;QD=3.91;ReadPosRankSum=1.346;VQSLOD=1.9218;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:15:4.40:0,4,25	0/0:3,0:3:3:0,3,25	./.	./.	0/0:19,0:18:1.89:0,2,2	1/1:19,0:13:2.60:6,3,0	0/0:12,1:16:3.72:0,4,53	0/0:38,0:31:43.77:0,44,257	1/1:7,0:6:0.89:2,1,0	0/1:12,1:11:64.45:293,0,64	1/1:13,1:11:3.01:61,3,0	1/1:11,1:9:4.57:25,5,0	0/0:12,0:12:11.97:0,12,242	1/1:21,1:17:2.48:5,2,0	0/1:12,1:12:1.40:1,0,9	1/1:15,2:14:2.69:13,3,0	0/0:15,1:13:1.76:0,2,4	1/1:5,1:4:6.01:104,6,0	0/1:16,0:9:33.91:74,0,34	1/1:6,3:6:5.56:33,6,0	0/0:30,0:15:0.47:0,0,1	0/0:6,0:5:4.55:0,5,215	0/0:11,0:9:11.42:0,11,392	0/0:29,0:26:45.06:0,45,1172	0/1:13,0:11:1.14:1,0,15	1/1:18,0:11:5.85:173,6,0	0/1:9,0:9:3.98:113,0,4	0/0:15,0:7:2.88:0,3,15
chr10	67021712	.	TCTCTCTCTCTCTCTCTCTCTCTCTTTCTCTCTCTCTCACACACACACACACACA	T	529.01	PASS	AB=1.000;AC=22;AF=0.440;AN=50;BaseQRankSum=0.370;DP=401;FS=11.643;HRun=0;HaplotypeScore=299.2567;InbreedingCoeff=0.2457;MQ=32.65;MQ0=56;MQRankSum=0.030;QD=2.14;ReadPosRankSum=-3.266;VQSLOD=0.8685;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:13:3.93:24,4,0	0/0:3,0:3:3.01:0,3,74	./.	./.	0/0:19,0:18:0.47:0,0,1	0/1:20,0:13:3.13:18,0,3	0/1:18,0:17:0.86:1,0,325	1/1:29,9:33:27.59:406,28,0	1/1:8,0:6:0.91:4,1,0	0/1:13,0:11:26.33:26,0,759	0/0:14,0:11:2.82:0,3,177	1/1:15,0:11:2.80:93,3,0	0/0:9,0:9:9.03:0,9,630	1/1:20,0:15:4.81:29,5,0	0/1:14,0:12:0:1,0,0	1/1:16,0:14:3.21:10,3,0	0/1:15,0:12:7.15:7,0,88	0/0:7,0:5:3.79:0,4,193	0/0:14,0:8:5.99:0,6,226	1/1:10,0:6:0.94:1,1,0	1/1:27,0:11:0.47:1,0,0	0/0:8,0:7:2.36:0,2,545	0/0:12,0:9:11.74:0,12,1321	0/0:31,0:28:45.12:0,45,3943	./.	0/1:17,0:11:39.78:40,0,542	0/0:10,0:9:6.02:0,6,164	0/0:14,0:7:2.32:0,2,108
chr10	67021766	.	A	ACACACTCTCT	5434.89	PASS	AB=0.802;AC=38;AF=0.679;AN=56;BaseQRankSum=0.236;DP=431;FS=0.000;HRun=0;HaplotypeScore=105.8287;InbreedingCoeff=0.3922;MQ=43.76;MQ0=42;MQRankSum=-2.902;QD=18.30;ReadPosRankSum=0.443;VQSLOD=3.4174;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:10,0:13:9.15:161,9,0	0/0:1,0:1:2.98:0,3,21	0/0:35,0:9:5.70:0,6,97	0/0:35,0:8:5.06:0,5,186	1/1:6,0:7:6.02:119,6,0	1/1:10,4:12:4.83:165,5,0	1/1:3,8:15:3.01:151,3,0	1/1:28,0:21:36:512,36,0	1/1:2,6:8:0.61:156,1,0	0/1:11,1:11:73.91:413,0,74	1/1:10,0:10:2.97:42,3,0	1/1:10,0:11:15.52:590,16,0	0/0:8,0:8:18.06:0,18,320	1/1:16,0:16:18.03:443,18,0	0/1:9,0:13:22.81:32,0,23	1/1:14,0:15:13.17:381,13,0	0/1:9,0:9:14.65:46,0,15	1/1:5,5:11:3.01:161,3,0	1/1:10,0:7:20.94:381,21,0	1/1:7,3:9:2.81:160,3,0	1/1:14,0:8:5.58:167,6,0	0/0:15,0:14:15.50:0,16,315	0/0:14,0:11:27.01:0,27,586	0/0:24,0:23:57.19:0,57,1276	1/1:5,7:14:6.02:321,6,0	0/1:9,0:15:51.16:583,0,51	1/1:10,0:17:11.61:290,12,0	1/1:8,0:5:9.03:163,9,0
chr10	67022739	.	C	CTA	17176.98	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-14.697;DP=509;FS=0.000;HRun=0;HaplotypeScore=48.6910;InbreedingCoeff=0.9980;MQ=81.80;MQ0=3;MQRankSum=-3.818;QD=48.39;ReadPosRankSum=5.683;VQSLOD=5.7566;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:57.18:0,57,813	0/0:7,0:7:21.07:0,21,309	0/0:19,0:19:40.69:0,41,565	0/0:9,0:9:27.09:0,27,388	1/1:0,24:24:66.22:1215,66,0	1/1:0,15:16:42.14:787,42,0	1/1:0,10:10:24.08:450,24,0	0/0:46,0:46:99:0,132,1928	1/1:1,17:18:51.17:955,51,0	1/1:1,21:22:63.19:1094,63,0	1/1:2,22:24:60.20:1100,60,0	1/1:0,17:17:48.16:899,48,0	0/0:14,0:14:42.14:0,42,618	1/1:1,12:14:39.13:711,39,0	1/1:2,22:24:60.21:1124,60,0	1/1:0,27:27:66.23:1236,66,0	1/1:1,11:12:33.11:618,33,0	1/1:2,12:13:32.85:574,33,0	1/1:1,14:16:45.14:795,45,0	1/1:1,25:25:66.23:1236,66,0	1/1:1,12:13:36.12:674,36,0	0/0:14,0:14:39.12:0,39,549	0/0:15,0:15:45.15:0,45,662	0/0:10,0:10:30.10:0,30,442	1/1:0,17:17:45.15:843,45,0	1/1:0,21:21:63.22:1181,63,0	1/1:0,26:27:69.24:1292,69,0	1/1:0,13:12:21.07:393,21,0
chr10	67023503	.	CT	C	7189.79	PASS	AB=0.905;AC=44;AF=0.786;AN=56;BaseQRankSum=5.761;DP=456;FS=0.000;HRun=11;HaplotypeScore=48.4314;InbreedingCoeff=0.7228;MQ=69.21;MQ0=4;MQRankSum=1.946;QD=18.44;ReadPosRankSum=5.521;VQSLOD=5.1986;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,15:16:38.95:320,39,0	1/1:4,6:10:0.36:127,0,0	0/1:8,1:6:1.46:1,0,62	0/0:12,0:9:6.48:0,6,62	1/1:2,32:33:83.19:689,83,0	1/1:1,9:10:1.81:194,2,0	1/1:5,11:16:29.96:246,30,0	0/0:28,0:27:69.10:0,69,703	1/1:2,13:15:32.96:271,33,0	1/1:3,16:19:47.94:394,48,0	1/1:2,23:26:64.94:523,65,0	1/1:3,7:10:17.97:148,18,0	0/0:13,1:14:11.37:0,11,298	1/1:3,15:18:38.95:320,39,0	1/1:1,20:21:50.94:419,51,0	1/1:1,13:14:35.95:296,36,0	1/1:5,19:24:56.92:467,57,0	1/1:1,11:12:29.96:246,30,0	1/1:1,14:15:41.95:345,42,0	1/1:3,24:27:63.78:519,64,0	1/1:3,6:9:20.97:172,21,0	0/0:4,0:4:9.02:0,9,96	0/1:9,1:10:9.60:10,0,113	0/0:8,0:8:18.05:0,18,192	1/1:1,16:17:44.94:369,45,0	1/1:2,18:20:48.80:394,49,0	1/1:2,25:28:67.93:548,68,0	1/1:3,7:10:20.97:172,21,0
chr10	67023769	.	AT	A	4494.97	PASS	AB=0.646;AC=38;AF=0.679;AN=56;BaseQRankSum=6.768;DP=415;FS=3.353;HRun=13;HaplotypeScore=42.1110;InbreedingCoeff=0.6707;MQ=71.38;MQ0=1;MQRankSum=0.382;QD=13.54;ReadPosRankSum=3.203;VQSLOD=5.1166;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,16:20:38.74:284,39,0	1/1:4,11:16:28.86:203,29,0	0/0:8,0:9:5.50:0,6,38	0/0:8,0:7:2.84:0,3,14	0/0:15,0:15:30.04:0,30,287	1/1:1,21:22:47.79:404,48,0	1/1:4,12:16:0.65:168,1,0	0/0:22,0:22:36.50:0,37,338	0/1:2,10:12:5.32:129,0,5	1/1:4,11:15:26.74:194,27,0	0/1:3,10:13:2.33:148,0,2	1/1:5,8:13:20.83:151,21,0	0/1:6,1:7:6.89:7,0,102	1/1:0,10:10:23.86:175,24,0	1/1:4,15:19:26.84:197,27,0	1/1:3,6:9:17.88:131,18,0	1/1:3,15:18:15.55:277,16,0	1/1:0,5:5:11.93:88,12,0	1/1:5,12:18:34.74:242,35,0	1/1:8,11:19:29.76:218,30,0	0/1:5,9:15:0.30:152,0,0	0/0:7,0:7:21.03:0,21,200	0/0:13,0:13:27.03:0,27,258	0/0:9,0:9:24.02:0,24,227	1/1:8,9:17:34.99:248,35,0	1/1:8,17:24:50.12:366,50,0	1/1:4,25:31:69.58:493,70,0	1/1:2,10:12:29.80:219,30,0
chr10	67023918	.	GA	G	3046.04	PASS	AB=0.774;AC=38;AF=0.679;AN=56;BaseQRankSum=6.183;DP=380;FS=1.119;HRun=13;HaplotypeScore=62.7343;InbreedingCoeff=0.5315;MQ=60.72;MQ0=11;MQRankSum=0.764;QD=10.15;ReadPosRankSum=2.358;VQSLOD=3.1565;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,1:19:16.46:0,16,295	0/0:4,0:4:9.01:0,9,88	0/1:16,0:6:7.89:8,0,67	0/1:20,1:4:0.72:1,0,20	1/1:3,0:16:22.37:65,22,0	1/1:6,12:20:15.44:250,15,0	0/1:7,7:15:3.29:133,0,3	0/0:29,1:29:26.04:0,26,387	1/1:4,12:15:11.65:239,12,0	1/1:0,7:7:20.86:151,21,0	1/1:2,10:12:26.84:197,27,0	1/1:4,5:8:11.91:88,12,0	0/1:6,1:7:6.41:6,0,102	1/1:5,9:14:27.91:186,28,0	1/1:5,14:20:23.21:313,23,0	1/1:2,7:11:24.95:165,25,0	1/1:6,20:26:62.55:454,63,0	1/1:4,10:14:23.85:175,24,0	1/1:5,9:15:7.96:194,8,0	1/1:4,6:11:7.90:121,8,0	0/1:3,7:10:8.33:110,0,8	0/0:3,0:3:6.01:0,6,58	0/0:8,0:7:18.03:0,18,175	0/0:15,1:16:19.62:0,20,325	0/1:2,6:8:40.42:70,0,40	1/1:4,5:10:13.91:93,14,0	1/1:4,7:14:27.36:172,27,0	1/1:2,2:4:5.95:44,6,0
chr10	67024097	.	GTCTC	G	386.28	PASS	AB=0.881;AC=23;AF=0.639;AN=36;BaseQRankSum=3.049;DP=359;FS=0.000;HRun=0;HaplotypeScore=69.5030;InbreedingCoeff=0.3066;MQ=47.32;MQ0=47;MQRankSum=-0.889;QD=3.17;ReadPosRankSum=2.413;VQSLOD=1.3649;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:11:0:0,0,0	1/1:7,1:8:2.66:46,3,0	./.	0/0:66,0:10:0:0,0,0	0/0:11,0:9:0:0,0,0	1/1:8,1:8:0.13:0,0,0	1/1:5,6:11:11.50:93,11,0	0/0:37,0:35:13.08:0,13,94	1/1:6,1:7:3.01:36,3,0	./.	1/1:3,2:5:1.28:3,1,0	./.	./.	0/1:5,3:8:0:0,0,0	1/1:7,1:10:5.88:62,6,0	./.	1/1:13,1:15:6.85:95,7,0	1/1:3,1:3:3.01:47,3,0	1/1:12,0:11:3:28,3,0	./.	./.	0/1:9,0:6:0:0,0,0	0/1:10,1:9:28.90:29,0,40	0/0:9,0:9:3.22:0,3,13	./.	1/1:9,1:7:3.01:46,3,0	./.	./.
chr10	67027359	.	AAAAAAAAAAAAGAG	A	1454.42	PASS	AB=1.000;AC=18;AF=0.321;AN=56;BaseQRankSum=11.748;DP=426;FS=18.925;HRun=0;HaplotypeScore=160.2788;InbreedingCoeff=-0.3131;MQ=51.29;MQ0=27;MQRankSum=-7.894;QD=6.41;ReadPosRankSum=2.541;VQSLOD=1.5269;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:21:57.20:0,57,2047	0/0:8,0:7:15.05:0,15,542	0/0:41,0:13:29.09:0,29,558	0/0:33,0:3:5.38:0,5,91	1/1:8,5:13:29.82:727,30,0	0/1:11,0:10:64.44:64,0,477	0/1:11,0:9:99:119,0,235	0/0:23,0:18:48.15:0,48,1027	0/1:13,0:13:59.12:59,0,459	0/0:13,0:13:27.02:0,27,567	0/1:11,0:10:47.52:48,0,307	0/1:12,0:12:97.49:97,0,140	0/0:12,0:11:24.08:0,24,1285	0/1:9,0:9:26.18:26,0,322	0/1:13,0:11:68.19:68,0,368	0/1:13,0:13:51.49:51,0,381	0/1:16,0:14:61.08:61,0,318	0/1:12,0:8:4.30:4,0,206	0/1:18,0:17:22.34:22,0,595	0/1:10,0:10:99:109,0,224	0/0:8,0:6:15.03:0,15,243	0/0:7,0:6:12.04:0,12,517	0/0:18,0:18:51.16:0,51,2014	0/0:13,0:12:27.09:0,27,1056	0/1:9,0:9:33.54:34,0,437	0/1:18,0:18:24.14:24,0,649	0/1:16,0:16:66.54:67,0,498	0/1:22,0:15:37.45:37,0,598
chr10	67027364	.	AAAAAAAGAGAGAGAGAGAG	A	6367.96	PASS	AB=0.984;AC=22;AF=0.393;AN=56;BaseQRankSum=9.559;DP=404;FS=12.591;HRun=0;HaplotypeScore=166.0321;InbreedingCoeff=-0.1061;MQ=47.42;MQ0=33;MQRankSum=-6.129;QD=28.68;ReadPosRankSum=6.818;VQSLOD=2.5107;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:22:57.63:0,58,1761	0/0:9,0:8:9.03:0,9,643	0/0:33,0:9:16.81:0,17,280	0/0:31,0:3:3.01:0,3,38	0/1:15,0:15:46.91:47,0,343	0/1:11,0:10:45.92:322,0,46	1/1:9,0:7:11.30:455,11,0	0/0:29,0:22:22.86:0,23,361	0/1:13,0:13:38.63:531,0,39	0/0:8,0:8:0:0,0,1	0/1:8,1:8:7.77:259,0,8	1/1:10,0:10:23.85:840,24,0	0/0:13,0:11:24.07:0,24,1492	0/1:9,0:9:43.10:320,0,43	0/1:12,1:11:32.50:448,0,32	0/1:13,0:13:19.66:430,0,20	0/1:15,0:13:9.21:416,0,9	0/1:12,0:8:9.27:252,0,9	0/1:16,1:16:41.45:360,0,41	1/1:7,1:7:11.55:491,12,0	1/1:8,0:6:1.75:6,2,0	0/0:5,0:4:9.03:0,9,669	0/0:17,0:17:45.12:0,45,1603	0/0:13,0:12:27.03:0,27,912	0/1:9,0:9:13.30:222,0,13	0/1:12,0:12:47.01:219,0,47	0/1:16,0:15:45.42:426,0,45	0/1:23,0:14:46.79:324,0,47
chr10	67027365	.	AAAAAAGAGAGAGAGAGAG	A	7612.54	PASS	AB=0.917;AC=32;AF=0.571;AN=56;BaseQRankSum=7.107;DP=379;FS=2.727;HRun=0;HaplotypeScore=145.3233;InbreedingCoeff=0.4551;MQ=46.87;MQ0=33;MQRankSum=-5.272;QD=32.81;ReadPosRankSum=6.115;VQSLOD=3.2357;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:23:56.99:0,57,1753	0/0:8,0:7:9.03:0,9,612	0/0:32,0:9:11.91:0,12,223	0/0:31,0:3:2.80:0,3,13	0/1:14,0:14:24.96:25,0,295	0/1:7,0:9:7.38:349,0,7	1/1:8,1:7:11.51:489,12,0	0/1:27,0:21:13.67:14,0,250	1/1:11,2:13:14.79:642,15,0	0/0:4,0:4:0:0,0,0	1/1:5,1:5:8.84:303,9,0	1/1:7,1:8:24.08:929,24,0	0/0:13,0:11:24.05:0,24,1397	0/1:8,1:9:6.38:370,0,6	1/1:11,1:10:11.15:493,11,0	1/1:10,2:12:20.35:597,20,0	1/1:12,2:12:8.83:499,9,0	1/1:11,1:8:6.82:245,7,0	0/1:14,0:13:18.13:369,0,18	1/1:5,3:7:11.72:548,12,0	1/1:7,0:5:2.78:31,3,0	0/0:5,0:4:9.03:0,9,637	0/0:16,0:16:42:0,42,1372	0/0:13,0:12:26.87:0,27,808	1/1:6,2:8:14.60:357,15,0	1/1:10,0:10:8.10:245,8,0	0/1:12,3:14:2.36:591,0,2	1/1:20,3:14:20.09:517,20,0
chr10	67027370	.	AGAGAGAGAGAGAG	A	5823.53	PASS	AB=0.871;AC=30;AF=0.556;AN=54;BaseQRankSum=8.048;DP=287;FS=3.218;HRun=0;HaplotypeScore=97.2696;InbreedingCoeff=0.5415;MQ=40.65;MQ0=33;MQRankSum=-5.610;QD=41.60;ReadPosRankSum=4.179;VQSLOD=4.2374;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:18:32.67:0,33,1565	0/0:6,0:5:9.03:0,9,501	0/0:21,0:6:11.83:0,12,266	0/0:23,0:2:2.84:0,3,14	0/0:13,0:14:1.86:0,2,329	1/1:6,0:5:9.03:274,9,0	1/1:7,1:6:12:408,12,0	0/0:22,0:15:21.96:0,22,371	1/1:6,3:9:18.38:554,18,0	./.	1/1:5,0:4:1.42:190,1,0	1/1:2,6:8:24.08:847,24,0	0/0:12,0:10:18.06:0,18,985	1/1:6,1:8:3.36:306,3,0	1/1:7,2:7:12.03:422,12,0	0/1:8,2:10:5.29:404,0,5	1/1:9,2:9:12.37:422,12,0	0/1:9,1:7:99:215,0,161	1/1:11,2:12:3.81:316,4,0	1/1:7,0:6:12.04:394,12,0	0/0:3,0:2:2.37:0,2,8	0/0:6,0:5:9.03:0,9,501	0/0:9,0:9:3.72:0,4,799	0/0:8,0:7:8.86:0,9,489	1/1:3,0:3:2.46:187,2,0	1/1:5,1:6:5.96:212,6,0	1/1:11,1:11:2.62:395,3,0	1/1:15,0:6:4.29:277,4,0
chr10	67027419	.	CAA	C	6376.34	PASS	AB=0.731;AC=37;AF=0.661;AN=56;BaseQRankSum=3.414;DP=444;FS=3.072;HRun=10;HaplotypeScore=110.2122;InbreedingCoeff=0.7728;MQ=64.34;MQ0=5;MQRankSum=-1.806;QD=20.77;ReadPosRankSum=6.058;VQSLOD=3.8715;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:22:62.70:0,63,961	0/0:9,0:9:22.44:0,22,274	0/1:30,0:18:5.81:6,0,335	0/0:23,0:11:17.71:0,18,206	1/1:5,11:16:9.49:274,9,0	1/1:3,11:14:26.08:328,26,0	1/1:2,13:15:21.29:383,21,0	0/0:26,0:28:67.61:0,68,851	1/1:2,10:12:27.07:297,27,0	1/1:0,14:14:39.09:426,39,0	1/1:2,13:14:39.09:422,39,0	1/1:3,14:17:36.09:399,36,0	0/0:14,0:16:31.91:0,32,442	1/1:3,7:10:15.02:165,15,0	1/1:1,15:16:42.11:466,42,0	1/1:2,9:11:24.06:267,24,0	1/1:5,10:15:17.30:292,17,0	1/1:2,12:13:30.07:329,30,0	1/1:4,15:20:42:506,42,0	0/1:4,11:15:7.40:207,0,7	1/1:1,10:10:21.05:232,21,0	0/0:13,0:13:36.12:0,36,559	0/0:15,0:15:36.11:0,36,550	0/0:10,0:10:24.01:0,24,299	1/1:2,7:9:15.41:151,15,0	1/1:1,15:16:45.11:501,45,0	1/1:2,19:21:48.02:521,48,0	0/1:6,10:15:39.09:204,0,39
chr10	67028063	.	AAAAC	A	14698.15	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=9.607;DP=499;FS=4.907;HRun=0;HaplotypeScore=92.5924;InbreedingCoeff=0.9950;MQ=70.23;MQ0=1;MQRankSum=-1.792;QD=43.74;ReadPosRankSum=4.996;VQSLOD=4.7325;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:81.26:0,81,1978	0/0:5,0:5:15.05:0,15,380	0/0:16,0:15:42.13:0,42,868	0/0:12,0:11:24.81:0,25,432	0/0:28,0:28:84.29:0,84,2054	1/1:0,17:17:42.14:742,42,0	1/1:0,13:13:27.09:477,27,0	0/0:21,0:21:54.15:0,54,1232	1/1:0,10:10:24.07:424,24,0	1/1:1,13:14:36.11:605,36,0	1/1:0,18:18:51.13:866,51,0	1/1:0,14:14:36.12:635,36,0	0/0:14,0:14:36.12:0,36,867	1/1:0,16:16:48.16:848,48,0	1/1:0,19:19:51.14:869,51,0	1/1:1,19:20:51.13:901,51,0	1/1:2,22:24:57.20:1007,57,0	1/1:1,18:19:39.09:656,39,0	1/1:2,24:26:72.20:1199,72,0	1/1:0,20:20:60.13:992,60,0	1/1:2,10:12:18.06:317,18,0	0/0:7,0:7:21.07:0,21,533	0/0:18,0:18:54.19:0,54,1359	0/0:13,0:13:39.11:0,39,926	1/1:1,24:25:60.21:1059,60,0	1/1:1,21:22:66.14:1099,66,0	1/1:1,27:27:69.24:1206,69,0	1/1:0,19:19:45.15:795,45,0
chr10	67028224	.	C	CA	1166.85	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-6.440;DP=548;FS=0.597;HRun=8;HaplotypeScore=61.7690;InbreedingCoeff=0.8978;MQ=64.31;MQ0=1;MQRankSum=0.176;QD=27.14;ReadPosRankSum=1.790;VQSLOD=4.2627;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,37:39:99:1177,102,0	1/1:0,4:4:9.03:104,9,0	0/0:25,0:22:40.19:0,40,352	0/0:21,0:19:38.73:0,39,330	0/0:20,0:20:45.01:0,45,412	0/0:20,0:20:57.03:0,57,522	0/0:20,0:19:51.02:0,51,466	0/0:26,0:25:52.58:0,53,637	0/0:15,0:15:45.02:0,45,412	0/0:20,1:21:19.39:0,19,428	0/0:10,0:10:27.01:0,27,247	0/0:15,0:15:45.01:0,45,407	0/0:17,0:17:48.02:0,48,438	0/0:18,0:18:45.02:0,45,412	0/0:27,0:27:69.02:0,69,632	0/0:18,0:18:54.03:0,54,494	0/0:28,0:28:63.13:0,63,585	0/0:14,0:14:27.01:0,27,247	0/0:27,0:27:74.97:0,75,673	0/0:17,1:18:19.40:0,19,428	0/0:18,1:19:13.19:0,13,377	0/0:2,0:2:6:0,6,55	0/0:12,0:12:27.01:0,27,247	0/0:23,0:23:44.76:0,45,411	0/0:18,0:18:51.03:0,51,467	0/0:37,0:37:90.03:0,90,824	0/0:25,0:25:62.98:0,63,565	0/0:9,0:9:21:0,21,192
chr10	67028323	.	GTA	G	545.91	PASS	AB=0.960;AC=13;AF=0.232;AN=56;BaseQRankSum=10.816;DP=584;FS=46.450;HRun=0;HaplotypeScore=87.1756;InbreedingCoeff=-0.0816;MQ=59.62;MQ0=17;MQRankSum=-1.742;QD=2.29;ReadPosRankSum=-0.081;VQSLOD=-0.0358;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:38.23:0,38,437	0/0:8,0:8:17.90:0,18,139	0/0:45,0:14:32.54:0,33,418	0/0:56,0:27:56.14:0,56,613	1/1:18,1:19:50.89:410,51,0	0/1:12,3:15:24.50:25,0,120	0/0:16,0:15:11.80:0,12,173	0/0:29,0:28:26.82:0,27,533	0/0:20,0:20:44.52:0,45,374	0/0:17,0:17:44.31:0,44,358	0/1:23,1:24:22.78:23,0,237	0/1:14,0:14:15.83:16,0,142	0/0:10,2:12:26.92:0,27,247	0/1:13,2:15:29.31:29,0,195	0/1:24,0:24:2.03:2,0,268	0/0:14,0:14:15.70:0,16,173	0/1:22,0:22:7.23:7,0,220	0/1:17,0:17:28.73:29,0,144	0/0:14,0:13:32.94:0,33,286	0/0:19,0:19:11.64:0,12,303	0/1:35,1:36:9.32:9,0,465	0/1:11,0:11:6.93:7,0,149	0/0:18,0:18:27.37:0,27,378	0/0:17,0:17:7.02:0,7,322	0/0:23,0:23:17.70:0,18,367	0/0:11,0:11:32.98:0,33,289	0/1:20,1:21:45.34:45,0,183	0/1:19,1:19:96.24:96,0,129
chr10	67028325	.	ATG	A	1739.99	PASS	AB=0.859;AC=32;AF=0.615;AN=52;BaseQRankSum=2.335;DP=600;FS=6.175;HRun=0;HaplotypeScore=87.3600;InbreedingCoeff=0.3884;MQ=57.67;MQ0=18;MQRankSum=1.666;QD=4.64;ReadPosRankSum=4.623;VQSLOD=1.6551;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:29:4.23:4,0,44	1/1:6,0:8:1.25:3,1,0	./.	./.	0/0:22,0:22:8.93:0,9,67	1/1:12,2:16:14.62:104,15,0	1/1:12,4:15:6.02:65,6,0	0/0:31,0:30:7.67:0,8,61	0/0:19,0:20:11.99:0,12,114	0/0:17,0:17:2.90:0,3,16	1/1:15,8:26:10.75:166,11,0	1/1:9,6:14:12.03:130,12,0	0/0:12,0:12:3.01:0,3,44	1/1:12,2:15:14.70:125,15,0	1/1:15,8:23:12.03:130,12,0	1/1:8,4:13:5.85:46,6,0	0/1:11,10:22:3.48:156,0,3	1/1:12,3:16:13.27:132,13,0	0/1:14,1:14:26.50:27,0,31	0/1:14,5:19:8.49:84,0,8	1/1:36,2:38:4.82:177,5,0	0/0:13,0:13:18.84:0,19,151	0/1:20,0:21:2.13:2,0,268	0/1:15,2:17:24.17:24,0,178	1/1:19,4:23:12.03:130,12,0	0/0:12,0:12:2.94:0,3,18	1/1:16,4:21:20.88:207,21,0	1/1:12,9:21:14.94:195,15,0
chr10	67029424	.	GTGTGTGTA	G	3869.94	PASS	AB=1.000;AC=30;AF=0.536;AN=56;BaseQRankSum=7.791;DP=540;FS=1.114;HRun=0;HaplotypeScore=143.3334;InbreedingCoeff=0.6485;MQ=47.75;MQ0=25;MQRankSum=0.187;QD=13.82;ReadPosRankSum=1.884;VQSLOD=2.7893;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:32:8.61:0,9,369	0/0:9,0:9:9:0,9,81	0/0:33,0:11:32.90:0,33,303	0/0:36,0:14:38.65:0,39,346	0/0:19,0:18:14.22:0,14,129	1/1:21,0:23:14.60:251,15,0	0/0:20,0:18:0.21:0,0,1	0/0:29,0:25:39.43:0,39,415	1/1:9,0:9:18.19:257,18,0	0/1:25,0:25:19.34:471,0,19	1/1:11,0:8:9.02:142,9,0	1/1:16,0:15:6.02:147,6,0	0/0:18,0:17:38.43:0,38,906	1/1:20,0:20:15.76:250,16,0	1/1:17,0:16:14.83:256,15,0	1/1:16,1:18:11.73:242,12,0	0/1:13,0:12:4.89:155,0,5	1/1:6,0:5:10.37:97,10,0	0/1:17,0:14:69.25:143,0,69	0/1:21,0:21:0.17:205,0,0	1/1:28,0:26:10.89:177,11,0	0/0:17,0:17:42.37:0,42,896	0/0:19,0:19:21.05:0,21,504	0/0:25,0:24:18.78:0,19,844	1/1:12,0:12:8.89:111,9,0	1/1:16,0:16:41.41:671,41,0	1/1:4,11:14:6.09:140,6,0	1/1:9,1:12:16.18:154,16,0
chr10	67029432	.	ATG	A	3106.87	PASS	AB=0.667;AC=33;AF=0.589;AN=56;BaseQRankSum=7.203;DP=519;FS=12.738;HRun=0;HaplotypeScore=110.6649;InbreedingCoeff=0.7872;MQ=54.50;MQ0=16;MQRankSum=-0.439;QD=12.18;ReadPosRankSum=2.944;VQSLOD=2.4632;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:31:71.92:0,72,790	0/0:10,0:10:12.04:0,12,189	0/0:39,0:17:51:0,51,766	0/0:39,0:17:33.21:0,33,644	0/0:20,0:19:17.88:0,18,247	1/1:7,14:21:8.68:112,9,0	0/0:4,15:17:1.25:0,1,3	0/0:28,0:25:63.11:0,63,914	1/1:4,5:9:19.30:227,19,0	1/1:3,20:23:13.38:666,13,0	1/1:3,9:10:9.01:101,9,0	1/1:5,7:12:6.01:78,6,0	0/0:17,0:16:38.92:0,39,567	1/1:6,13:19:12.04:152,12,0	1/1:2,14:15:15.04:186,15,0	1/1:11,4:15:18.06:234,18,0	1/1:3,9:12:9.03:113,9,0	1/1:7,0:6:12.04:154,12,0	0/1:8,8:14:99:271,0,104	1/1:3,19:22:9.03:109,9,0	1/1:5,17:22:8.47:110,8,0	0/0:18,0:18:42.13:0,42,648	0/0:19,0:19:18.95:0,19,294	0/0:22,0:21:14.01:0,14,392	1/1:5,6:11:5.88:55,6,0	1/1:1,16:17:45.11:537,45,0	1/1:11,1:11:5.91:55,6,0	1/1:9,0:9:14.94:156,15,0
chr10	67029760	.	G	GT	926.53	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-6.208;DP=486;FS=0.000;HRun=1;HaplotypeScore=156.2823;InbreedingCoeff=0.9283;MQ=70.56;MQ0=0;MQRankSum=2.518;QD=34.32;ReadPosRankSum=0.693;VQSLOD=3.2136;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:60.17:0,60,761	0/0:6,0:6:18.06:0,18,233	0/0:13,0:13:33.07:0,33,388	0/0:10,0:10:20.02:0,20,212	1/1:1,26:27:72.16:1021,72,0	0/0:21,0:21:60.18:0,60,762	0/0:14,0:14:36.12:0,36,465	0/0:29,0:28:84.26:0,84,1078	0/0:13,0:13:33.11:0,33,427	0/0:28,0:28:81.22:0,81,1025	0/0:22,0:22:63.20:0,63,813	0/0:19,0:19:51.17:0,51,657	0/0:16,0:16:48.14:0,48,608	0/0:14,0:14:39.13:0,39,504	0/0:18,0:18:51.15:0,51,640	0/0:17,0:17:51.16:0,51,652	0/0:13,0:13:29.80:0,30,322	0/0:3,0:3:9:0,9,103	0/0:15,0:15:42.14:0,42,541	0/0:21,0:21:54.17:0,54,691	0/0:10,0:9:24.08:0,24,310	0/0:13,0:13:39.11:0,39,492	0/0:22,0:22:63.13:0,63,766	0/0:19,0:19:51.17:0,51,662	0/0:12,0:12:33.10:0,33,415	0/0:34,0:34:99:0,102,1307	0/0:26,0:25:75.23:0,75,953	0/0:10,0:10:24.03:0,24,276
chr10	67029770	.	C	CCT	9998.22	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=16.111;DP=457;FS=12.074;HRun=0;HaplotypeScore=131.3078;InbreedingCoeff=0.9616;MQ=73.51;MQ0=0;MQRankSum=-15.360;QD=35.33;ReadPosRankSum=2.920;VQSLOD=6.6579;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:54.18:0,54,881	0/0:6,0:6:17.99:0,18,260	0/0:15,0:15:45.15:0,45,709	0/0:10,0:10:27.09:0,27,440	0/0:23,0:23:66.19:0,66,1013	1/1:1,17:20:60.14:808,60,0	1/1:0,8:13:36.09:470,36,0	0/0:34,0:33:99:0,102,1598	1/1:0,8:10:30.08:399,30,0	1/1:4,17:26:73.95:935,74,0	1/1:6,13:21:57.77:694,58,0	1/1:1,15:19:52.03:686,52,0	0/0:17,0:17:51.16:0,51,806	1/1:3,8:14:32.51:401,33,0	1/1:3,12:18:49.95:657,50,0	1/1:1,10:17:51.06:604,51,0	1/1:3,4:11:25.06:221,25,0	1/1:1,0:1:3.01:44,3,0	1/1:2,8:13:38.59:476,39,0	1/1:3,15:19:51.13:683,51,0	1/1:2,3:7:9.03:136,9,0	0/0:13,0:13:39.13:0,39,631	0/0:16,0:16:48.15:0,48,754	0/0:22,0:22:66.23:0,66,1071	1/1:1,6:12:32.95:399,33,0	1/1:1,24:33:96.16:1256,96,0	1/1:0,17:22:69.13:907,69,0	1/1:0,5:5:15.05:223,15,0
chr10	67029771	.	A	AG	1866.49	PASS	AB=0.691;AC=32;AF=0.571;AN=56;BaseQRankSum=16.876;DP=458;FS=20.342;HRun=0;HaplotypeScore=151.3156;InbreedingCoeff=0.7508;MQ=73.52;MQ0=0;MQRankSum=-15.460;QD=6.62;ReadPosRankSum=7.234;VQSLOD=1.9097;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:54.18:0,54,754	0/0:6,0:6:18:0,18,212	0/0:15,0:15:45.14:0,45,602	0/0:11,0:11:27.05:0,27,377	0/0:22,0:22:63.14:0,63,838	1/1:3,17:20:15.47:157,15,0	1/1:5,8:13:20.71:93,21,0	0/0:36,0:35:99:0,102,1412	1/1:2,8:10:24.25:97,24,0	0/1:10,16:26:1.07:214,0,1	0/1:9,12:21:31.40:85,0,31	1/1:4,15:19:35.41:150,35,0	0/0:17,0:17:51.15:0,51,694	1/1:6,8:14:20.83:103,21,0	1/1:6,12:18:34.94:151,35,0	1/1:7,10:17:20.14:115,20,0	0/1:5,4:9:1.77:18,0,2	1/1:1,0:1:2.22:7,2,0	1/1:4,8:12:17.47:127,17,0	1/1:4,15:19:11.60:127,12,0	0/1:7,2:8:3.74:15,0,4	0/0:13,0:13:39.13:0,39,545	0/0:16,0:16:45.13:0,45,611	0/0:22,0:22:66.19:0,66,900	1/1:6,6:12:15.38:70,15,0	1/1:9,24:33:44.91:286,45,0	1/1:7,17:23:36.59:197,37,0	1/1:0,5:5:14.01:65,14,0
chr10	67029773	.	T	TTTC	12406.83	PASS	AB=0.631;AC=26;AF=0.464;AN=56;BaseQRankSum=11.016;DP=488;FS=21.518;HRun=0;HaplotypeScore=145.2578;InbreedingCoeff=0.4820;MQ=72.30;MQ0=0;MQRankSum=-14.815;QD=39.89;ReadPosRankSum=5.780;VQSLOD=4.1503;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:57.17:0,57,949	0/0:5,0:5:12.04:0,12,212	0/0:16,0:16:45.14:0,45,765	0/0:10,0:11:27.09:0,27,474	0/0:23,0:23:60.20:0,60,1014	1/1:5,17:22:27.11:1070,27,0	0/1:7,8:15:2.47:484,0,2	0/0:36,0:35:99:0,105,1803	1/1:7,8:15:28.59:666,29,0	0/1:12,16:29:28.07:1214,0,28	0/1:7,12:21:2.70:886,0,3	1/1:4,15:19:36.95:880,37,0	0/0:17,0:17:51.16:0,51,871	1/1:7,8:15:15.73:631,16,0	1/1:6,12:20:0.62:765,1,0	0/1:7,10:18:30.89:608,0,31	0/1:7,4:11:0.78:248,0,1	0/0:1,0:1:2.80:0,3,13	0/1:4,8:13:16.13:479,0,16	1/1:6,15:21:41.29:1001,41,0	1/1:7,2:8:9.03:148,9,0	0/0:13,0:13:39.13:0,39,688	0/0:15,0:15:45.15:0,45,767	0/0:21,0:21:63.16:0,63,1050	1/1:8,6:14:13.34:447,13,0	0/1:13,23:37:7.19:1515,0,7	0/1:10,17:26:0.52:1080,0,1	1/1:0,5:5:15.05:282,15,0
chr10	67031626	.	AATAC	A	738.55	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.904;DP=532;FS=2.187;HRun=0;HaplotypeScore=95.8819;InbreedingCoeff=0.9818;MQ=75.70;MQ0=0;MQRankSum=-2.174;QD=38.87;ReadPosRankSum=1.507;VQSLOD=4.0189;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:87.30:0,87,2328	0/0:12,0:12:30.10:0,30,795	0/0:17,0:17:51.18:0,51,1334	0/0:14,0:14:35.15:0,35,859	1/1:2,17:19:45.11:833,45,0	0/0:23,0:23:63.22:0,63,1723	0/0:12,0:12:33.11:0,33,903	0/0:29,0:29:87.30:0,87,2359	0/0:19,0:19:39.06:0,39,1066	0/0:29,0:29:78.26:0,78,2054	0/0:7,0:7:15.05:0,15,377	0/0:21,0:21:54.19:0,54,1450	0/0:16,0:16:42.14:0,42,1149	0/0:25,0:25:66.23:0,66,1761	0/0:11,0:11:33.10:0,33,846	0/0:13,0:13:33.11:0,33,862	0/0:30,0:30:90.31:0,90,2396	0/0:13,0:13:36.12:0,36,931	0/0:14,0:14:42.14:0,42,1150	0/0:16,0:16:45.15:0,45,1205	0/0:16,0:16:45.15:0,45,1232	0/0:22,0:22:51.18:0,51,1394	0/0:23,0:23:60.21:0,60,1641	0/0:14,0:14:30.09:0,30,764	0/0:16,0:16:30.08:0,30,761	0/0:21,0:21:63.22:0,63,1712	0/0:24,0:24:72.25:0,72,1911	0/0:20,0:20:57.20:0,57,1548
chr10	67031647	.	T	TA	951.64	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-6.640;DP=495;FS=2.376;HRun=8;HaplotypeScore=71.4311;InbreedingCoeff=0.9677;MQ=70.03;MQ0=0;MQRankSum=1.219;QD=21.15;ReadPosRankSum=0.085;VQSLOD=3.8060;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,26:32:63.19:727,63,0	1/1:0,12:13:30.09:346,30,0	0/0:12,0:12:23.99:0,24,212	0/0:21,0:22:27.10:0,27,363	0/0:22,0:22:51.02:0,51,466	0/0:18,0:18:45.02:0,45,412	0/0:10,0:10:21.01:0,21,192	0/0:30,0:29:72.01:0,72,653	0/0:20,0:20:41.66:0,42,378	0/0:23,0:23:63.03:0,63,577	0/0:6,0:6:12.01:0,12,110	0/0:20,0:20:48.01:0,48,439	0/0:16,0:16:42.02:0,42,384	0/0:23,1:24:31.27:0,31,516	0/0:9,0:9:20.99:0,21,188	0/0:7,0:7:15:0,15,137	0/0:28,0:28:69.03:0,69,631	0/0:16,0:16:39.02:0,39,356	0/0:18,0:18:45.01:0,45,408	0/0:15,0:15:33.01:0,33,302	0/0:17,0:17:35.99:0,36,324	0/0:18,0:18:30.01:0,30,274	0/0:22,0:22:50.61:0,51,466	0/0:9,0:9:23.99:0,24,214	0/0:17,0:17:24.01:0,24,219	0/0:18,0:18:51.03:0,51,467	0/0:19,0:19:51.02:0,51,466	0/0:14,0:14:39.02:0,39,357
chr10	67038583	.	GACACACACACACAC	G	7954.94	PASS	AB=0.916;AC=32;AF=0.571;AN=56;BaseQRankSum=4.453;DP=574;FS=12.630;HRun=0;HaplotypeScore=221.2898;InbreedingCoeff=0.6156;MQ=57.77;MQ0=17;MQRankSum=-4.502;QD=24.55;ReadPosRankSum=2.484;VQSLOD=2.5428;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:26:33:0,33,811	0/0:11,0:11:14.88:0,15,788	0/0:37,0:7:2.98:0,3,22	0/0:43,0:13:2.67:0,3,21	1/1:12,4:15:17.89:433,18,0	1/1:9,3:13:29.85:559,30,0	1/1:31,0:30:5.98:151,6,0	0/0:22,0:22:44.73:0,45,479	1/1:10,7:17:29.76:893,30,0	1/1:11,2:13:8.26:263,8,0	1/1:9,4:13:18.03:497,18,0	1/1:14,5:20:29.94:743,30,0	0/0:11,0:13:20.99:0,21,862	1/1:24,8:32:36.89:1009,37,0	1/1:20,5:25:15.33:658,15,0	1/1:16,6:23:15.96:892,16,0	0/0:29,0:29:59.84:0,60,1717	0/1:7,0:7:9.52:64,0,10	1/1:11,1:12:11.98:189,12,0	1/1:13,0:13:5.99:50,6,0	0/1:29,0:28:55.10:77,0,55	0/0:20,0:23:36.02:0,36,1579	0/0:18,0:16:29.94:0,30,1139	0/0:21,0:26:48.09:0,48,2118	1/1:15,3:19:26.92:527,27,0	0/1:11,3:14:16.51:391,0,17	0/1:13,2:15:7.71:374,0,8	1/1:9,1:9:8.61:184,9,0
chr10	67038627	.	CAT	C	4684.62	PASS	AB=0.854;AC=39;AF=0.722;AN=54;BaseQRankSum=11.771;DP=547;FS=0.436;HRun=0;HaplotypeScore=141.4644;InbreedingCoeff=0.6490;MQ=52.34;MQ0=25;MQRankSum=-2.797;QD=12.14;ReadPosRankSum=1.312;VQSLOD=4.6629;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:8,29:35:32.97:98,0,33	1/1:9,0:9:6.14:60,6,0	0/0:20,0:10:29.99:0,30,279	0/0:28,0:20:17.80:0,18,340	1/1:19,0:18:3.27:42,3,0	1/1:21,0:21:50.23:365,50,0	1/1:17,0:16:35.85:276,36,0	0/1:36,0:32:20.98:318,0,21	1/1:17,0:17:41.80:272,42,0	1/1:17,0:15:41.63:301,42,0	1/1:15,0:15:11.70:68,12,0	1/1:17,0:17:35.46:236,35,0	0/0:19,0:19:41.02:0,41,461	1/1:13,0:13:24.80:161,25,0	1/1:20,0:20:36.98:270,37,0	1/1:16,0:15:35.31:223,35,0	1/1:28,3:31:70:626,70,0	1/1:1,9:10:2.97:20,3,0	0/1:16,0:13:38.87:116,0,39	./.	1/1:25,0:24:44.82:346,45,0	0/0:27,0:27:30.72:0,31,421	0/0:21,0:19:35.72:0,36,417	0/0:34,0:34:29.14:0,29,594	1/1:12,0:12:26.65:183,27,0	1/1:12,0:12:29.64:212,30,0	1/1:17,0:16:47.57:340,48,0	1/1:9,0:7:20.80:150,21,0
chr10	67038629	.	TACAC	T	10275.03	PASS	AB=0.900;AC=39;AF=0.750;AN=52;BaseQRankSum=3.441;DP=545;FS=0.928;HRun=0;HaplotypeScore=137.0624;InbreedingCoeff=0.8741;MQ=52.96;MQ0=24;MQRankSum=-3.472;QD=27.55;ReadPosRankSum=0.526;VQSLOD=4.3947;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:35,1:34:9.38:89,9,0	0/1:8,1:9:40.54:87,0,41	0/0:24,0:12:36.11:0,36,668	0/0:28,0:21:40.49:0,40,867	1/1:1,19:19:11.70:144,12,0	1/1:16,4:20:54.17:820,54,0	1/1:17,0:16:36.12:572,36,0	1/1:11,20:27:60.14:852,60,0	1/1:10,7:17:41.96:653,42,0	1/1:3,15:16:48.11:684,48,0	1/1:0,15:15:12.04:187,12,0	1/1:12,6:18:39.13:615,39,0	0/0:20,0:20:51.16:0,51,922	1/1:5,8:13:33.08:468,33,0	1/1:19,4:23:51.14:749,51,0	1/1:8,7:15:36.12:548,36,0	1/1:27,2:29:32.59:767,33,0	./.	1/1:8,8:13:24.03:347,24,0	./.	1/1:26,0:25:45.62:693,46,0	0/0:25,0:25:42.13:0,42,798	0/0:19,0:17:29.84:0,30,599	0/0:33,0:33:69.18:0,69,1261	1/1:6,5:11:27.09:430,27,0	1/1:0,12:12:33.10:489,33,0	1/1:15,3:17:51.16:764,51,0	1/1:8,1:7:21.07:320,21,0
chr10	67038971	.	CTGTGTGTGTGTG	C	3453.45	PASS	AB=0.809;AC=27;AF=0.540;AN=50;BaseQRankSum=5.459;DP=407;FS=12.161;HRun=0;HaplotypeScore=136.1522;InbreedingCoeff=0.6044;MQ=33.17;MQ0=48;MQRankSum=-4.775;QD=16.06;ReadPosRankSum=2.224;VQSLOD=1.3108;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:18:15.05:0,15,655	0/0:6,0:6:5.61:0,6,108	./.	0/0:3,0:2:6.02:0,6,146	0/0:23,0:21:39.60:0,40,1158	1/1:22,5:24:14.83:388,15,0	1/1:18,3:18:1.72:98,2,0	0/0:16,0:15:27.09:0,27,915	1/1:13,2:13:6.02:196,6,0	0/1:6,1:6:70.88:97,0,71	./.	./.	0/0:19,0:18:27.75:0,28,1018	0/1:10,1:9:0.21:0,0,0	1/1:6,3:9:3.01:100,3,0	1/1:14,4:18:14.34:469,14,0	0/0:18,0:12:9.50:0,10,311	1/1:9,1:4:2.95:104,3,0	1/1:15,0:12:5.95:195,6,0	1/1:7,2:9:3.01:102,3,0	1/1:9,0:5:3.01:76,3,0	0/0:19,0:18:11.84:0,12,509	0/0:14,0:12:5.81:0,6,293	0/0:28,0:24:27.09:0,27,1275	0/1:9,0:14:0:0,0,0	1/1:18,10:25:29.92:941,30,0	1/1:7,3:11:14.96:497,15,0	1/1:3,0:3:6.02:190,6,0
chr10	67038996	.	TGTGTGTGTGTGA	T	2861.13	PASS	AB=0.954;AC=15;AF=0.268;AN=56;BaseQRankSum=8.116;DP=373;FS=4.359;HRun=0;HaplotypeScore=138.6338;InbreedingCoeff=-0.0713;MQ=54.08;MQ0=31;MQRankSum=-6.567;QD=23.45;ReadPosRankSum=5.514;VQSLOD=2.1825;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:24:32.99:0,33,991	0/0:10,0:10:20.59:0,21,215	0/0:23,0:12:29.24:0,29,355	0/0:15,0:8:18.01:0,18,239	0/0:27,0:25:51.11:0,51,1474	0/1:15,1:15:92.49:284,0,92	0/1:11,0:10:15.97:129,0,16	0/0:19,0:18:53.81:0,54,1181	0/1:7,3:9:58.53:182,0,59	0/1:5,0:5:92.80:140,0,93	0/0:5,0:5:2.94:0,3,18	0/0:12,1:12:2.92:0,3,75	0/0:15,0:15:29.92:0,30,1333	0/0:6,0:5:2.59:0,3,10	0/1:12,0:11:60.94:150,0,61	1/1:8,0:8:15.05:411,15,0	0/0:18,0:12:17.98:0,18,402	0/1:11,0:7:46.10:80,0,46	0/1:8,1:9:99:172,0,122	0/1:5,0:5:18.98:78,0,19	0/1:8,0:5:15.97:88,0,16	0/0:17,0:17:17.71:0,18,792	0/0:19,0:17:23.60:0,24,600	0/0:23,0:21:35.99:0,36,1457	0/0:15,0:14:8.43:0,8,56	0/1:15,0:15:61.81:708,0,62	0/1:7,1:8:15.91:445,0,16	1/1:4,0:2:6.02:154,6,0
chr10	67040525	.	TGATA	T	517.59	PASS	AB=0.959;AC=13;AF=0.250;AN=52;BaseQRankSum=-3.335;DP=742;FS=1.603;HRun=0;HaplotypeScore=194.3783;InbreedingCoeff=0.1812;MQ=55.24;MQ0=3;MQRankSum=1.115;QD=1.74;ReadPosRankSum=5.048;VQSLOD=2.6702;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:25,7:32:21.02:280,21,0	1/1:13,5:18:7.55:131,8,0	./.	./.	0/0:24,0:24:30.24:0,30,338	0/0:26,0:26:21.45:0,21,219	0/1:19,0:22:33.93:34,0,76	1/1:23,0:27:2.87:22,3,0	0/0:24,0:24:15.48:0,15,164	0/1:48,0:48:17.83:18,0,508	0/0:21,0:21:18.67:0,19,155	0/0:23,0:23:7.38:0,7,74	0/0:20,0:33:27.09:0,27,462	0/0:26,0:26:18.91:0,19,194	0/0:30,0:30:12.04:0,12,141	0/0:22,0:22:12.94:0,13,121	0/1:16,11:27:15.98:41,0,16	0/0:15,0:15:9.02:0,9,100	0/1:23,0:23:6.90:7,0,188	0/1:37,0:37:19.66:20,0,261	0/1:25,0:25:12.94:13,0,95	0/0:40,0:40:78.27:0,78,1747	0/0:24,0:24:39.09:0,39,761	0/0:23,0:26:45.12:0,45,943	0/0:32,0:32:22.28:0,22,226	0/1:35,0:35:99:106,0,357	0/0:34,0:33:26.45:0,26,250	0/0:4,0:4:3.01:0,3,49
chr10	67040560	.	T	TAGAC	5264.44	PASS	AB=0.937;AC=29;AF=0.518;AN=56;BaseQRankSum=10.848;DP=729;FS=5.120;HRun=0;HaplotypeScore=192.1348;InbreedingCoeff=0.0243;MQ=54.80;MQ0=6;MQRankSum=-3.412;QD=9.11;ReadPosRankSum=0.666;VQSLOD=4.0890;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:34:8.29:8,0,282	0/0:11,0:11:2.84:0,3,152	0/0:7,0:6:15.02:0,15,181	0/0:12,0:9:27.04:0,27,279	0/1:31,0:31:71.02:108,0,71	0/1:29,1:30:20.87:295,0,21	0/1:24,0:24:99:115,0,202	0/1:31,0:27:22.14:22,0,339	1/1:22,0:22:18.06:253,18,0	0/1:41,0:41:99:620,0,465	0/1:30,0:30:30.12:120,0,30	0/1:23,0:23:9.11:167,0,9	0/1:32,0:31:99:245,0,318	1/1:22,0:22:19.12:198,19,0	1/1:2,19:21:12.04:290,12,0	1/1:23,0:23:20.08:250,20,0	0/0:29,0:29:24.61:0,25,300	0/1:15,0:15:15.61:128,0,16	0/1:10,13:21:14.40:479,0,14	1/1:11,25:35:22.85:520,23,0	1/1:6,23:30:5.47:146,5,0	0/0:40,0:40:72.03:0,72,1626	0/0:25,0:25:63.07:0,63,882	0/0:27,0:26:39.19:0,39,884	1/1:30,0:30:0.14:215,0,0	0/1:9,24:35:6.19:571,0,6	1/1:3,32:38:23.79:477,24,0	0/1:6,0:6:13.93:37,0,14
chr10	67040564	.	T	TAGACAGAC	10272.47	PASS	AB=0.990;AC=37;AF=0.661;AN=56;BaseQRankSum=1.957;DP=737;FS=3.839;HRun=0;HaplotypeScore=210.8422;InbreedingCoeff=0.6686;MQ=56.98;MQ0=6;MQRankSum=-4.989;QD=18.54;ReadPosRankSum=-1.626;VQSLOD=3.4019;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:32,0:32:69.26:69,0,133	0/0:11,0:11:5.47:0,5,90	0/0:8,0:7:21.03:0,21,370	0/0:14,0:11:30.07:0,30,538	0/1:30,0:31:74.36:211,0,74	1/1:6,24:34:21.07:802,21,0	1/1:23,0:23:27.79:358,28,0	1/1:32,0:29:22.98:86,23,0	1/1:2,16:22:18.06:758,18,0	1/1:9,31:44:94:2047,94,0	1/1:5,27:33:4.32:250,4,0	1/1:3,17:26:11.67:503,12,0	0/0:31,0:30:55.47:0,55,685	1/1:2,16:19:15.05:628,15,0	1/1:23,0:23:21.02:254,21,0	1/1:1,22:28:18.06:669,18,0	0/0:28,0:28:0.26:0,0,56	1/1:5,11:18:13.29:477,13,0	1/1:23,0:21:41.67:608,42,0	1/1:36,0:35:41.86:479,42,0	1/1:29,0:29:9.02:116,9,0	0/0:40,0:40:99:0,108,2538	0/0:23,0:23:63.17:0,63,1282	0/0:28,0:27:66.65:0,67,1432	1/1:5,21:29:18.06:758,18,0	1/1:32,0:32:33.56:776,34,0	1/1:34,0:33:24.82:339,25,0	0/1:6,0:6:6.59:85,0,7
chr10	67040568	.	T	TAGACAGAC	13038.07	PASS	AB=1.000;AC=41;AF=0.732;AN=56;BaseQRankSum=-3.120;DP=725;FS=5.109;HRun=0;HaplotypeScore=209.8254;InbreedingCoeff=0.7312;MQ=58.47;MQ0=4;MQRankSum=-4.749;QD=22.48;ReadPosRankSum=-3.962;VQSLOD=3.4353;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:31,0:31:6.20:465,0,6	0/1:11,0:11:11.58:275,0,12	0/0:9,0:8:21.07:0,21,394	0/0:16,0:13:33.04:0,33,604	1/1:7,25:35:14.57:391,15,0	1/1:35,0:35:27.05:849,27,0	1/1:23,0:23:24.06:329,24,0	1/1:34,0:33:71.52:1024,72,0	1/1:20,0:20:24.05:807,24,0	1/1:44,0:44:99:2221,99,0	1/1:31,0:31:8.79:302,9,0	1/1:22,0:22:11.67:503,12,0	0/0:30,0:29:52.06:0,52,659	1/1:20,0:20:21.03:678,21,0	1/1:23,0:23:24.07:351,24,0	1/1:30,0:30:24.05:714,24,0	1/1:27,0:27:19.26:518,19,0	1/1:16,0:16:14.60:422,15,0	1/1:23,0:21:47.11:674,47,0	1/1:37,0:36:36.11:514,36,0	1/1:27,0:27:9.01:115,9,0	0/0:38,0:38:99:0,104,2341	0/0:24,0:24:60.17:0,60,1218	0/0:28,0:27:57.67:0,58,1273	1/1:24,0:24:18.06:758,18,0	1/1:29,0:29:34.76:671,35,0	1/1:32,0:31:27.33:353,27,0	0/1:6,0:6:5.47:104,0,5
chr10	67042151	.	G	GAC	15070.56	PASS	AC=44;AF=0.815;AN=54;BaseQRankSum=2.052;DP=366;FS=0.000;HRun=0;HaplotypeScore=81.9238;InbreedingCoeff=0.8656;MQ=62.76;MQ0=0;MQRankSum=-2.497;QD=43.43;ReadPosRankSum=3.001;VQSLOD=6.2825;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,15:18:42.14:766,42,0	1/1:0,13:13:27.09:492,27,0	0/0:4,0:3:3:0,3,28	0/0:5,0:5:11.76:0,12,112	1/1:1,19:21:54.19:972,54,0	1/1:0,15:15:36.12:659,36,0	1/1:1,7:8:21.07:378,21,0	1/1:1,29:30:90.03:1226,90,0	1/1:1,5:6:9.03:165,9,0	1/1:1,23:24:72.23:1246,72,0	1/1:2,18:20:54.19:975,54,0	1/1:1,11:13:21.07:383,21,0	0/0:3,0:3:9.01:0,9,116	1/1:2,11:14:33.11:597,33,0	1/1:1,8:9:24.08:437,24,0	1/1:1,10:11:30.10:548,30,0	1/1:1,19:20:45.15:823,45,0	1/1:2,14:16:38.16:657,38,0	1/1:1,15:16:48.02:714,48,0	1/1:0,18:18:39.13:709,39,0	1/1:0,6:6:18.06:328,18,0	./.	0/0:6,0:6:15.01:0,15,167	0/0:1,0:1:2.99:0,3,24	1/1:1,8:9:21.07:386,21,0	1/1:5,22:28:75.17:1190,75,0	1/1:3,20:23:54.09:981,54,0	1/1:0,9:9:24.08:437,24,0
chr10	67043155	.	TA	T	871.49	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.062;DP=639;FS=1.608;HRun=3;HaplotypeScore=82.2125;InbreedingCoeff=0.9995;MQ=74.54;MQ0=0;MQRankSum=-2.214;QD=31.12;ReadPosRankSum=1.873;VQSLOD=3.6646;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:90.30:0,90,1294	0/0:12,0:12:36.12:0,36,518	0/0:18,0:18:54.15:0,54,716	0/0:17,0:17:48.15:0,48,633	1/1:0,28:28:78.25:966,78,0	0/0:31,0:31:93.28:0,93,1315	0/0:13,0:13:39.13:0,39,562	0/0:37,0:36:99:0,105,1512	0/0:34,0:34:99:0,99,1406	0/0:35,0:35:96.32:0,96,1375	0/0:24,0:24:72.24:0,72,1036	0/0:22,0:22:63.21:0,63,906	0/0:15,0:15:39.11:0,39,542	0/0:20,0:20:60.19:0,60,846	0/0:26,0:26:78.26:0,78,1122	0/0:13,0:13:39.13:0,39,562	0/0:19,0:19:57.18:0,57,803	0/0:22,0:22:57.17:0,57,801	0/0:12,0:12:36.11:0,36,502	0/0:28,0:28:84.27:0,84,1191	0/0:18,0:18:54.18:0,54,777	0/0:23,0:23:66.22:0,66,950	0/0:24,0:24:72.24:0,72,1036	0/0:15,0:15:45.15:0,45,648	0/0:27,0:27:81.27:0,81,1148	0/0:32,0:32:96.31:0,96,1366	0/0:23,0:23:66.19:0,66,914	0/0:20,0:20:45.15:0,45,648
chr10	67043431	.	CT	C	17836.10	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=10.128;DP=670;FS=2.791;HRun=4;HaplotypeScore=95.7842;InbreedingCoeff=0.9993;MQ=70.83;MQ0=0;MQRankSum=-5.149;QD=32.25;ReadPosRankSum=2.791;VQSLOD=5.2313;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,33:35:99:1211,102,0	1/1:0,15:15:45.14:540,45,0	0/0:15,0:15:29.55:0,30,494	0/0:14,0:14:38.92:0,39,457	1/1:2,23:25:63.19:752,63,0	1/1:2,26:28:72.22:864,72,0	1/1:1,21:22:54.17:648,54,0	1/1:0,23:23:66.20:792,66,0	1/1:0,25:25:75.23:900,75,0	1/1:3,28:30:81.22:947,81,0	1/1:0,22:22:66.20:792,66,0	1/1:1,24:25:69.21:828,69,0	0/0:23,0:23:66.19:0,66,890	1/1:0,19:19:45.14:540,45,0	1/1:1,29:30:81.25:972,81,0	1/1:1,21:22:63.19:756,63,0	1/1:6,33:39:90.27:1080,90,0	1/1:0,21:21:54.17:648,54,0	1/1:2,10:12:30.07:342,30,0	1/1:0,32:32:90.21:1061,90,0	1/1:0,39:39:99:1260,105,0	0/0:22,0:22:57.19:0,57,798	0/0:15,0:15:42.14:0,42,588	0/0:28,0:28:84.28:0,84,1176	1/1:2,20:22:57.17:684,57,0	1/1:0,31:31:93.27:1104,93,0	1/1:0,26:26:69.21:828,69,0	1/1:1,8:9:24.07:288,24,0
chr10	67044828	.	AC	A	4869.08	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=10.722;DP=658;FS=1.188;HRun=1;HaplotypeScore=66.3867;InbreedingCoeff=0.9988;MQ=87.64;MQ0=0;MQRankSum=-4.403;QD=39.91;ReadPosRankSum=0.268;VQSLOD=5.3345;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,57:57:99:2307,166,0	1/1:0,9:9:24.04:313,24,0	0/0:21,0:21:60.38:0,60,891	0/0:27,0:27:70.88:0,71,1075	0/0:14,0:14:42.13:0,42,641	0/0:8,0:8:24.08:0,24,378	0/0:32,0:32:93.28:0,93,1430	1/1:0,21:21:63.19:844,63,0	0/0:16,0:16:48.12:0,48,715	0/0:26,0:26:78.25:0,78,1204	0/0:14,0:14:39.13:0,39,620	0/0:25,0:25:75.26:0,75,1195	0/0:18,0:18:54.18:0,54,858	0/0:23,0:23:69.24:0,69,1102	0/0:21,0:21:63.21:0,63,1004	0/0:23,0:23:69.22:0,69,1072	1/1:0,35:35:99:1405,102,0	0/0:25,0:24:75.21:0,75,1140	0/0:31,0:31:90.30:0,90,1413	0/0:12,0:12:36.11:0,36,550	0/0:42,0:42:99:0,123,1922	0/0:16,0:16:39.12:0,39,600	0/0:18,0:18:54.16:0,54,834	0/0:28,0:28:84.26:0,84,1317	0/0:19,0:19:57.18:0,57,884	0/0:23,0:23:66.21:0,66,1018	0/0:27,0:27:81.23:0,81,1240	0/0:27,0:27:81.28:0,81,1290
chr10	67045663	.	G	GA	1350.59	PASS	AB=0.767;AC=31;AF=0.574;AN=54;BaseQRankSum=0.815;DP=461;FS=0.568;HRun=15;HaplotypeScore=62.6758;InbreedingCoeff=0.2876;MQ=49.75;MQ0=16;MQRankSum=-0.141;QD=4.56;ReadPosRankSum=-2.164;VQSLOD=0.9076;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:36:24.35:0,24,225	0/1:8,1:8:2.67:3,0,60	./.	0/0:6,0:5:10.10:0,10,51	1/1:14,0:16:14.64:66,15,0	1/1:5,10:15:2.13:39,2,0	0/1:6,4:10:12.01:19,0,12	0/0:32,0:30:27.84:0,28,169	1/1:8,0:7:5.95:45,6,0	1/1:19,1:19:9.59:98,10,0	0/1:9,7:16:2.99:55,0,3	1/1:9,3:11:20.32:149,20,0	0/1:11,1:11:14.03:14,0,31	1/1:12,2:15:16.26:122,16,0	0/1:12,1:12:37.41:99,0,37	1/1:8,0:8:5.23:37,5,0	0/0:37,0:35:39.51:0,40,333	1/1:7,10:17:14.46:91,14,0	0/1:16,11:25:14.05:224,0,14	0/1:11,7:18:13.31:100,0,13	1/1:4,6:9:5.99:50,6,0	0/0:11,0:11:23.96:0,24,143	0/0:16,0:16:19.34:0,19,113	0/0:18,0:18:9.64:0,10,48	1/1:3,11:15:8.68:54,9,0	1/1:11,14:25:13.61:213,14,0	0/1:10,10:20:7.66:37,0,8	0/1:4,5:8:12.02:19,0,12
chr10	67046059	.	TCAAAA	T	8415.90	PASS	AB=0.615;AC=33;AF=0.589;AN=56;BaseQRankSum=10.005;DP=507;FS=4.682;HRun=0;HaplotypeScore=100.9804;InbreedingCoeff=0.8934;MQ=68.14;MQ0=1;MQRankSum=-8.106;QD=32.24;ReadPosRankSum=3.507;VQSLOD=4.4065;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:72.25:0,72,1945	0/0:10,0:10:24.08:0,24,671	0/0:23,0:19:26.53:0,27,500	0/0:34,0:25:28.31:0,28,750	0/0:25,0:25:51.17:0,51,1295	1/1:3,19:22:36.12:683,36,0	1/1:8,9:17:24.06:422,24,0	0/0:28,0:28:55.74:0,56,1389	1/1:7,8:15:18.06:341,18,0	1/1:6,6:12:18.06:340,18,0	1/1:3,13:16:36.12:683,36,0	1/1:2,8:10:21.07:398,21,0	0/0:9,0:9:9.03:0,9,261	1/1:2,7:9:12.04:228,12,0	1/1:7,15:22:42.14:796,42,0	1/1:4,9:13:18.06:341,18,0	0/0:20,0:20:39.09:0,39,940	1/1:6,15:21:39.13:739,39,0	1/1:6,7:13:21.06:346,21,0	1/1:6,21:27:60.20:1137,60,0	1/1:7,5:12:6.02:114,6,0	0/0:13,0:13:33.11:0,33,955	0/0:26,0:26:66.23:0,66,1812	0/0:22,0:22:48.12:0,48,1269	1/1:1,8:9:24.08:455,24,0	1/1:4,14:18:42.14:774,42,0	1/1:4,13:17:30.10:569,30,0	0/1:3,5:8:47.88:48,0,92
chr10	67049049	.	GT	G	13368.45	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=5.955;DP=654;FS=10.647;HRun=7;HaplotypeScore=85.8710;InbreedingCoeff=0.9997;MQ=70.23;MQ0=0;MQRankSum=-5.987;QD=25.51;ReadPosRankSum=3.318;VQSLOD=4.8804;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,25:31:62.39:667,62,0	1/1:1,10:11:30.06:306,30,0	0/0:28,0:24:46.36:0,46,561	0/0:20,0:17:34.09:0,34,413	1/1:1,31:32:93.13:933,93,0	1/1:3,22:25:66.15:673,66,0	1/1:5,16:21:49.90:487,50,0	1/1:5,33:38:96.12:958,96,0	1/1:4,13:17:36.08:367,36,0	1/1:3,26:29:75.15:758,75,0	1/1:4,13:17:42.08:421,42,0	1/1:2,12:14:33.07:337,33,0	0/0:24,0:24:66.17:0,66,781	1/1:5,20:25:66.13:667,66,0	1/1:1,21:22:57.13:581,57,0	1/1:4,10:14:39.06:381,39,0	1/1:7,13:19:33.07:337,33,0	1/1:0,21:21:60.14:611,60,0	1/1:0,19:19:54.11:544,54,0	1/1:7,28:35:90.20:918,90,0	1/1:7,15:20:42.08:423,42,0	0/0:14,0:14:39.12:0,39,489	0/0:23,0:23:66.21:0,66,829	0/0:21,0:21:57.18:0,57,715	1/1:4,35:39:96.20:971,96,0	1/1:2,24:26:72.14:726,72,0	1/1:8,21:29:81.16:813,81,0	1/1:0,17:17:48.11:490,48,0
chr10	67049101	.	GTTT	G	7988.66	PASS	AB=0.594;AC=37;AF=0.661;AN=56;BaseQRankSum=0.190;DP=577;FS=7.946;HRun=14;HaplotypeScore=120.8419;InbreedingCoeff=0.6321;MQ=67.00;MQ0=0;MQRankSum=-5.490;QD=17.87;ReadPosRankSum=3.475;VQSLOD=3.3895;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:6,2:21:26.99:27,0,46	0/0:2,0:12:14.20:0,14,47	0/0:14,0:9:17.28:0,17,176	0/0:14,0:13:14.40:0,14,199	0/1:8,3:23:10.41:10,0,35	1/1:4,23:30:70.57:804,71,0	1/1:13,9:23:25.39:503,25,0	0/1:7,3:31:65.29:65,0,75	1/1:5,8:14:35.96:391,36,0	1/1:10,13:23:41.96:490,42,0	1/1:2,21:23:51.05:594,51,0	1/1:9,13:22:38.92:454,39,0	0/0:19,0:21:58.41:0,58,963	1/1:4,15:20:13.44:395,13,0	1/1:5,8:13:28.63:337,29,0	1/1:1,7:11:24.10:293,24,0	0/1:6,1:27:2.63:3,0,162	1/1:6,10:15:27.02:315,27,0	0/1:8,8:17:11.51:317,0,12	1/1:2,23:28:70.53:803,71,0	1/1:6,11:17:25.44:313,25,0	0/0:14,0:14:39.10:0,39,662	0/0:20,0:24:60.12:0,60,924	0/0:23,0:29:75.21:0,75,1270	1/1:10,16:26:28.21:495,28,0	1/1:5,14:22:42.13:520,42,0	1/1:7,21:31:58.64:672,59,0	1/1:1,4:6:17.98:186,18,0
chr10	67050349	.	A	AT	2172.59	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-9.351;DP=625;FS=0.000;HRun=8;HaplotypeScore=59.3060;InbreedingCoeff=0.9858;MQ=76.64;MQ0=0;MQRankSum=0.613;QD=24.14;ReadPosRankSum=1.193;VQSLOD=4.2388;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,50:58:99:1518,132,0	1/1:0,7:7:18.05:208,18,0	0/0:10,0:9:12.01:0,12,110	0/0:20,0:20:38.72:0,39,325	0/0:28,0:28:84.03:0,84,763	0/0:22,0:22:66.02:0,66,598	0/0:17,0:17:41.99:0,42,376	0/0:26,0:26:69.01:0,69,623	0/0:24,0:24:66.03:0,66,604	0/0:33,0:33:87.04:0,87,793	0/0:15,0:15:42.01:0,42,381	0/0:25,0:25:66.01:0,66,601	0/0:18,0:18:42:0,42,380	0/0:19,0:19:51.01:0,51,462	0/0:27,0:27:72.02:0,72,654	0/0:13,0:13:36.01:0,36,326	1/1:5,20:25:51.15:589,51,0	0/0:17,0:16:45:0,45,405	0/0:15,0:15:42.02:0,42,384	0/0:32,0:32:68.14:0,68,745	0/0:22,0:22:57.02:0,57,518	0/0:15,0:16:38.04:0,38,331	0/0:23,0:23:59.99:0,60,542	0/0:27,0:27:75.02:0,75,681	0/0:22,0:22:66.04:0,66,604	0/0:31,0:31:81.04:0,81,741	0/0:23,0:23:69.04:0,69,631	0/0:10,0:10:30.02:0,30,275
chr10	67051350	.	C	CGCGT	14390.97	PASS	AC=34;AF=0.630;AN=54;BaseQRankSum=-13.995;DP=577;FS=7.150;HRun=0;HaplotypeScore=91.5882;InbreedingCoeff=0.9689;MQ=64.70;MQ0=3;MQRankSum=-0.467;QD=39.21;ReadPosRankSum=2.842;VQSLOD=4.7440;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:78.18:0,78,1302	0/0:8,0:7:15.02:0,15,225	0/0:28,0:22:34.08:0,34,320	0/0:24,0:19:5.67:0,6,70	0/0:22,0:22:60.15:0,60,943	1/1:1,13:16:18.06:460,18,0	1/1:5,17:23:18.06:461,18,0	./.	1/1:0,14:15:18.02:461,18,0	1/1:3,22:26:72.22:1419,72,0	1/1:4,12:16:18.06:446,18,0	1/1:5,15:20:23.70:615,24,0	0/0:14,0:14:30.10:0,30,527	1/1:2,19:23:51.15:1251,51,0	1/1:2,18:23:33.11:846,33,0	1/1:1,13:15:18.06:462,18,0	0/0:22,0:22:48.14:0,48,803	1/1:2,30:33:57.15:1404,57,0	1/1:5,14:19:47.70:696,48,0	1/1:3,13:16:24.08:615,24,0	1/1:4,35:40:54.19:1384,54,0	0/0:13,0:13:30.09:0,30,486	0/0:16,0:16:42.12:0,42,683	0/0:28,0:28:72.22:0,72,1205	1/1:3,28:32:60.21:1535,60,0	1/1:5,20:26:54.14:1028,54,0	1/1:0,7:8:12.04:308,12,0	1/1:1,14:15:39.13:1000,39,0
chr10	67052988	.	TTCTTTCTTTCTTTC	T	1524.87	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-0.362;DP=517;FS=12.185;HRun=0;HaplotypeScore=210.2915;InbreedingCoeff=0.8878;MQ=42.28;MQ0=13;MQRankSum=-4.273;QD=33.89;ReadPosRankSum=2.973;VQSLOD=1.4986;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,22:24:24.08:826,24,0	1/1:2,8:9:15.05:572,15,0	0/0:17,0:3:8.39:0,8,190	0/0:18,0:3:9:0,9,129	0/0:39,0:36:99:0,99,3504	0/0:20,0:12:33.09:0,33,1310	0/0:17,0:17:42.14:0,42,1224	0/0:26,0:25:75.24:0,75,2261	0/0:16,0:14:33.11:0,33,1377	0/0:13,0:13:36.08:0,36,1257	0/0:20,0:13:30.09:0,30,912	0/0:13,0:11:27.07:0,27,917	0/0:11,0:10:30.09:0,30,1056	0/0:19,0:15:39.12:0,39,1497	0/0:20,0:13:30.10:0,30,1536	0/0:17,0:16:45.14:0,45,1655	1/1:2,9:10:6.02:259,6,0	0/0:9,0:6:18.03:0,18,577	0/0:26,0:23:68.88:0,69,1432	0/0:23,0:16:42.14:0,42,2124	0/0:5,0:5:9.03:0,9,349	0/0:24,0:24:72.23:0,72,3499	0/0:13,0:13:39.13:0,39,1736	0/0:30,0:29:83.65:0,84,3191	0/0:24,0:23:42.13:0,42,1809	0/0:25,0:21:60.20:0,60,2222	0/0:18,0:16:42.13:0,42,1643	0/0:8,0:7:21:0,21,696
chr10	67053005	.	T	TC	2577.67	PASS	AB=0.819;AC=26;AF=0.464;AN=56;BaseQRankSum=8.409;DP=497;FS=15.976;HRun=0;HaplotypeScore=97.8789;InbreedingCoeff=0.2264;MQ=42.03;MQ0=17;MQRankSum=-3.243;QD=8.21;ReadPosRankSum=0.883;VQSLOD=2.4208;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:24:24.48:0,24,113	0/0:12,0:11:19.62:0,20,110	0/0:20,0:7:14.86:0,15,155	0/0:14,0:3:5.29:0,5,65	0/1:20,14:30:99:225,0,330	0/1:17,5:12:48.95:116,0,49	0/1:11,4:15:96.61:172,0,97	0/0:26,0:25:65.53:0,66,870	1/1:9,6:13:26.37:200,26,0	0/1:10,5:15:99:158,0,113	0/1:16,2:11:68.47:68,0,71	1/1:10,3:11:6.17:155,6,0	0/0:9,0:8:24.08:0,24,334	1/1:13,5:13:11.43:168,11,0	1/1:13,8:13:12:169,12,0	1/1:13,4:14:13.98:240,14,0	0/0:11,0:9:5.97:0,6,44	0/1:9,1:7:6.45:53,0,6	0/1:17,4:18:82.16:82,0,166	1/1:12,11:16:18:271,18,0	0/1:4,0:4:13.87:19,0,14	0/0:21,0:21:60.09:0,60,738	0/0:13,0:12:33.10:0,33,445	0/0:32,0:30:82.94:0,83,969	1/1:7,13:19:12.43:230,12,0	0/1:15,9:19:82.04:205,0,82	0/1:12,6:15:22.47:167,0,22	1/1:5,1:4:8.98:72,9,0
chr10	67055783	.	G	GT	13359.66	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=2.783;DP=510;FS=0.000;HRun=1;HaplotypeScore=211.5582;InbreedingCoeff=0.9963;MQ=85.95;MQ0=0;MQRankSum=-7.099;QD=42.55;ReadPosRankSum=3.519;VQSLOD=4.1935;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,21:21:60.20:955,60,0	1/1:0,9:9:27.09:430,27,0	0/0:36,0:35:96.91:0,97,1210	0/0:32,0:32:74.69:0,75,1209	0/0:10,0:10:24.08:0,24,335	1/1:0,17:17:51.17:813,51,0	1/1:1,19:20:57.19:899,57,0	0/0:25,0:25:63.20:0,63,861	1/1:0,14:14:42.14:668,42,0	1/1:0,12:12:36.12:574,36,0	1/1:1,12:13:24.08:382,24,0	1/1:0,16:16:48.16:759,48,0	0/0:29,0:29:81.23:0,81,1108	1/1:1,13:14:39.13:622,39,0	1/1:0,23:23:69.24:1097,69,0	1/1:1,14:15:42.14:669,42,0	1/1:1,19:20:57.19:903,57,0	1/1:1,9:9:18.04:263,18,0	1/1:0,15:15:45.15:715,45,0	1/1:1,17:18:42.14:670,42,0	1/1:2,28:30:57.19:910,57,0	0/0:16,0:16:45.14:0,45,610	0/0:18,0:18:39.13:0,39,544	0/0:30,0:30:63.21:0,63,878	1/1:0,10:10:30.10:478,30,0	1/1:2,16:18:51.11:740,51,0	1/1:0,13:13:33.11:526,33,0	1/1:0,6:6:18.06:288,18,0
chr10	67055807	.	C	CCACA	1697.97	PASS	AB=0.954;AC=20;AF=0.400;AN=50;BaseQRankSum=-1.804;DP=529;FS=11.940;HRun=0;HaplotypeScore=233.8975;InbreedingCoeff=0.4828;MQ=61.68;MQ0=16;MQRankSum=0.652;QD=8.24;ReadPosRankSum=-2.943;VQSLOD=1.0716;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:26:0:0,0,0	0/0:12,0:12:6.01:0,6,55	./.	./.	0/0:6,0:12:11.84:0,12,93	1/1:18,1:17:8.99:117,9,0	1/1:20,1:21:23.67:220,24,0	./.	1/1:10,4:15:15.05:331,15,0	0/1:21,0:20:14.13:175,0,14	0/1:10,1:12:5.95:196,0,6	1/1:14,3:17:0.85:309,1,0	0/0:21,0:20:12.04:0,12,186	0/1:21,0:23:50.22:50,0,280	0/0:16,0:19:11.99:0,12,149	1/1:12,2:14:9.02:166,9,0	0/0:25,0:24:5.88:0,6,43	1/1:14,0:12:16.74:249,17,0	1/1:8,0:7:3:26,3,0	0/0:14,0:14:3:0,3,29	0/0:37,0:36:2.99:0,3,46	0/0:19,0:19:8.37:0,8,78	0/0:17,0:17:9.02:0,9,121	0/0:31,0:33:17.46:0,17,278	1/1:13,0:13:3:25,3,0	0/0:18,0:20:9.78:0,10,161	0/0:8,0:8:9.02:0,9,121	0/0:6,0:6:12.04:0,12,186
chr10	67055847	.	ACACG	A	944.63	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=2.512;DP=656;FS=1.984;HRun=0;HaplotypeScore=160.7100;InbreedingCoeff=0.9007;MQ=56.37;MQ0=34;MQRankSum=-1.399;QD=10.98;ReadPosRankSum=-0.401;VQSLOD=3.0969;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:29,2:30:35.91:290,36,0	1/1:5,1:6:14.98:167,15,0	0/0:51,0:14:35:0,35,387	0/0:52,0:20:52.04:0,52,473	0/1:20,0:20:0.09:0,0,362	0/0:18,0:17:27.38:0,27,352	0/0:24,0:23:50.89:0,51,613	0/0:23,0:20:59.47:0,59,427	0/0:16,0:16:32.89:0,33,499	0/0:26,0:26:75:0,75,1162	0/0:11,0:11:22.19:0,22,402	0/0:20,0:20:47.38:0,47,633	0/0:22,0:21:48.12:0,48,665	0/0:32,0:32:68.14:0,68,1198	0/0:15,0:15:35.93:0,36,463	0/0:11,0:11:17.98:0,18,240	1/1:26,3:28:71.39:627,71,0	0/0:18,0:16:43.10:0,43,464	0/0:18,0:16:39.78:0,40,366	0/0:13,0:13:35.04:0,35,349	0/0:57,0:57:97.83:0,98,936	0/0:28,0:27:62.99:0,63,857	0/0:13,0:13:35.96:0,36,565	0/0:35,0:35:50.69:0,51,775	0/0:16,0:16:29.92:0,30,402	0/0:29,0:29:81.25:0,81,1015	0/0:15,0:14:29.94:0,30,325	0/0:7,0:7:20.99:0,21,403
chr10	67061731	.	AGTAG	A	396.46	PASS	AB=0.750;AC=20;AF=0.909;AN=22;BaseQRankSum=-1.531;DP=27;FS=4.309;HRun=0;HaplotypeScore=31.4741;InbreedingCoeff=0.1569;MQ=111.86;MQ0=2;MQRankSum=-2.200;QD=15.25;ReadPosRankSum=1.148;VQSLOD=2.6545;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	1/1:1,1:2:6.02:76,6,0	1/1:2,0:1:2.98:21,3,0	0/1:6,0:4:2.18:2,0,47	1/1:3,1:4:11.89:108,12,0	./.	./.	./.	./.	1/1:1,1:2:5.97:57,6,0	1/1:3,0:3:8.17:39,8,0	./.	./.	./.	./.	./.	./.	./.	./.	1/1:0,1:1:3.01:39,3,0	./.	1/1:1,0:1:2.94:18,3,0	1/1:1,1:2:5.88:53,6,0	./.	./.	0/1:0,0:1:0:0,0,0	./.	1/1:0,2:2:6.01:61,6,0
chr10	67061740	.	GT	G	137.64	PASS	AB=1.000;AC=15;AF=0.682;AN=22;BaseQRankSum=-0.791;DP=21;FS=0.000;HRun=1;HaplotypeScore=25.5678;InbreedingCoeff=0.3638;MQ=82.88;MQ0=0;MQRankSum=-0.474;QD=10.59;ReadPosRankSum=0.685;VQSLOD=1.2004;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	1/1:0,2:2:5.52:27,6,0	1/1:1,0:1:2.50:9,2,0	0/1:1,0:1:0:0,0,0	0/0:4,0:4:3.87:0,4,10	./.	./.	./.	./.	1/1:0,2:2:6.02:74,6,0	1/1:1,2:3:7.22:32,7,0	./.	./.	./.	./.	./.	./.	./.	./.	1/1:0,1:1:2.50:9,2,0	./.	1/1:1,0:1:2.88:15,3,0	0/0:2,0:2:2.03:0,2,5	./.	./.	0/0:0,0:1:0:0,0,0	./.	1/1:0,2:2:6:53,6,0
chr10	67063405	.	TTC	T	273.78	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=2.982;DP=495;FS=1.031;HRun=0;HaplotypeScore=99.4142;InbreedingCoeff=0.8684;MQ=71.21;MQ0=6;MQRankSum=-1.947;QD=8.56;ReadPosRankSum=-0.274;VQSLOD=3.2712;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:14,4:18:20.43:195,20,0	1/1:3,1:4:6.02:72,6,0	0/0:33,0:27:49.55:0,50,778	0/0:27,0:11:17.88:0,18,237	0/0:28,0:28:63.67:0,64,942	0/0:22,0:21:48.13:0,48,677	0/0:10,0:10:8.77:0,9,118	0/0:37,0:36:75.23:0,75,1171	0/0:13,0:13:24.08:0,24,360	0/0:20,0:20:50:0,50,821	0/0:19,0:19:38.97:0,39,503	0/0:14,0:13:17.92:0,18,197	0/0:19,0:19:57.18:0,57,924	0/0:9,0:9:14.77:0,15,212	0/0:12,0:11:14.42:0,14,228	0/0:18,0:18:8.85:0,9,124	1/1:9,1:10:14.94:138,15,0	0/0:6,0:6:12.04:0,12,173	0/0:23,0:22:54.15:0,54,815	0/0:18,0:17:32.50:0,33,430	0/0:8,0:8:14.78:0,15,164	0/0:14,0:14:42.13:0,42,671	0/0:21,0:21:56.40:0,56,897	0/0:16,0:16:45.15:0,45,740	0/0:11,0:11:11.89:0,12,143	0/0:24,0:24:66.21:0,66,1004	0/0:21,0:21:33.52:0,34,507	0/0:19,0:19:27.07:0,27,375
chr10	67063417	.	T	TTCTCTCTCTCTCTCTC	6096.39	PASS	AB=1.000;AC=33;AF=0.660;AN=50;BaseQRankSum=2.862;DP=511;FS=5.672;HRun=0;HaplotypeScore=221.0330;InbreedingCoeff=0.5217;MQ=60.12;MQ0=12;MQRankSum=-2.208;QD=18.42;ReadPosRankSum=-3.366;VQSLOD=3.0367;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:21,0:20:85.60:106,0,86	0/0:4,0:4:0.96:0,1,29	./.	0/1:27,0:10:6.37:6,0,59	0/0:26,0:26:32.39:0,32,1219	1/1:14,5:21:3.01:219,3,0	1/1:10,0:9:10.26:151,10,0	0/0:37,0:34:43.90:0,44,798	1/1:14,0:13:9.02:146,9,0	1/1:14,0:19:18.05:669,18,0	1/1:11,0:24:2.99:227,3,0	./.	0/0:22,0:22:54.16:0,54,2052	1/1:8,0:8:5.58:111,6,0	1/1:14,0:12:18.04:792,18,0	1/1:16,0:16:18.05:879,18,0	0/0:14,0:14:2.91:0,3,214	1/1:7,0:7:5.53:298,6,0	1/1:21,0:20:15:512,15,0	1/1:19,0:18:9.01:264,9,0	./.	0/0:13,0:13:33.11:0,33,1431	0/1:26,0:26:13.60:14,0,1147	0/0:16,0:16:42.13:0,42,1692	1/1:10,0:10:5.46:100,5,0	1/1:24,0:24:33.09:839,33,0	1/1:11,6:31:4.26:230,4,0	1/1:17,0:17:15.02:533,15,0
chr10	67063437	.	CTGTG	C	3198.13	PASS	AB=1.000;AC=35;AF=0.648;AN=54;BaseQRankSum=5.269;DP=453;FS=21.349;HRun=0;HaplotypeScore=113.9681;InbreedingCoeff=0.3519;MQ=44.67;MQ0=19;MQRankSum=0.597;QD=9.60;ReadPosRankSum=-4.738;VQSLOD=-0.0788;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:11,3:18:9.03:136,9,0	1/1:1,2:6:6.02:93,6,0	0/0:18,0:4:12.03:0,12,167	0/0:25,0:8:8.65:0,9,143	1/1:4,18:24:38.91:583,39,0	0/1:13,0:12:7.63:84,0,8	0/1:10,0:9:19:19,0,42	1/1:22,0:33:31.64:349,32,0	1/1:11,0:10:6.02:82,6,0	1/1:13,0:12:4.48:187,4,0	0/1:23,0:23:0.50:200,0,1	1/1:14,0:12:12.03:160,12,0	0/0:18,0:18:38.92:0,39,837	1/1:9,0:9:9.02:117,9,0	1/1:13,0:11:14.34:183,14,0	1/1:16,0:16:6.30:94,6,0	1/1:6,5:12:12.04:196,12,0	0/1:7,0:7:13.13:95,0,13	0/1:16,0:12:13.85:35,0,14	1/1:16,0:15:6.48:72,6,0	./.	0/0:15,0:15:26.81:0,27,614	0/0:20,0:20:33.11:0,33,694	0/0:15,0:15:27.09:0,27,658	1/1:11,0:11:11.73:154,12,0	0/1:23,0:23:26.57:204,0,27	1/1:27,0:27:6.43:213,6,0	0/1:14,0:14:26.59:123,0,27
chr10	67063798	.	GCA	G	1239.94	PASS	AB=0.895;AC=8;AF=0.143;AN=56;BaseQRankSum=5.762;DP=561;FS=0.000;HRun=0;HaplotypeScore=112.0035;InbreedingCoeff=0.4084;MQ=52.75;MQ0=4;MQRankSum=2.378;QD=9.39;ReadPosRankSum=3.583;VQSLOD=3.2559;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:12,23:36:53.19:569,53,0	1/1:3,6:10:19.39:218,19,0	0/1:36,2:14:43.97:44,0,286	0/0:36,0:22:34.04:0,34,496	0/1:17,4:21:88.03:88,0,585	0/0:18,0:22:3.22:0,3,12	0/0:18,0:21:2.95:0,3,20	0/0:12,0:21:33.90:0,34,302	0/0:18,0:21:8.72:0,9,58	0/0:22,0:22:46.15:0,46,467	0/0:11,0:12:4.30:0,4,16	0/0:13,0:14:5.49:0,5,24	0/0:19,0:19:6.59:0,7,557	0/0:10,0:14:5.92:0,6,44	0/0:22,0:23:5.74:0,6,36	0/0:20,0:24:5.06:0,5,37	1/1:8,15:26:44.63:469,45,0	0/0:9,0:9:5.94:0,6,41	0/0:19,0:17:38.74:0,39,345	0/0:12,0:14:2.74:0,3,12	0/0:12,0:11:2.99:0,3,23	0/0:21,0:21:48.16:0,48,757	0/0:17,1:20:9.56:0,10,558	0/0:22,0:23:45.14:0,45,692	0/0:16,0:16:3.01:0,3,44	0/0:17,0:17:29.95:0,30,323	0/0:16,0:16:14.97:0,15,146	0/0:9,0:9:14.90:0,15,122
chr10	67064830	.	T	TA	1989.21	PASS	AB=0.889;AC=7;AF=0.125;AN=56;BaseQRankSum=-7.395;DP=543;FS=3.983;HRun=6;HaplotypeScore=52.0007;InbreedingCoeff=0.8546;MQ=64.99;MQ0=0;MQRankSum=1.011;QD=24.26;ReadPosRankSum=1.144;VQSLOD=3.3353;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,26:34:81.17:995,81,0	1/1:2,12:14:27.09:340,27,0	0/0:11,0:7:15.02:0,15,144	0/1:7,0:7:7.06:7,0,110	0/0:36,0:36:99:0,105,1023	0/0:14,0:14:36.05:0,36,353	0/0:15,0:15:42.07:0,42,420	0/0:36,0:36:99:0,99,982	0/0:11,0:11:27.06:0,27,275	0/0:22,0:22:63.14:0,63,637	0/0:17,0:17:41.90:0,42,398	0/0:11,0:11:30.04:0,30,294	0/0:19,0:19:48.11:0,48,489	0/0:22,0:22:63.14:0,63,642	0/0:15,0:15:33.06:0,33,330	0/0:16,0:16:42.09:0,42,428	1/1:0,26:26:63.20:793,63,0	0/0:21,0:21:51.07:0,51,509	0/0:22,0:22:51.08:0,51,502	0/0:26,0:26:72.14:0,72,726	0/0:17,0:17:42.06:0,42,415	0/0:12,0:12:30.07:0,30,306	0/0:18,0:18:54.10:0,54,542	0/0:22,0:22:63.11:0,63,627	0/0:22,0:21:57.06:0,57,557	0/0:20,0:20:48.08:0,48,475	0/0:28,0:28:84.17:0,84,844	0/0:8,0:8:24.05:0,24,244
chr10	67066065	.	C	CT	10595.74	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-10.164;DP=517;FS=3.649;HRun=6;HaplotypeScore=49.8603;InbreedingCoeff=0.9629;MQ=70.38;MQ0=0;MQRankSum=-1.740;QD=31.91;ReadPosRankSum=0.818;VQSLOD=5.2352;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:66.14:0,66,673	0/0:9,0:9:21.02:0,21,205	0/0:6,0:6:5.98:0,6,61	0/0:8,0:8:11.11:0,11,139	0/0:21,0:21:60.12:0,60,605	1/1:3,25:28:75.24:944,75,0	1/1:1,15:16:39.12:491,39,0	0/0:21,0:21:60.13:0,60,608	1/1:2,18:20:48.15:604,48,0	1/1:1,25:26:72.20:879,72,0	1/1:2,20:22:51.16:641,51,0	1/1:2,11:13:27.09:340,27,0	0/0:11,0:11:30.07:0,30,306	1/1:2,16:18:42.13:527,42,0	1/1:2,16:18:39.12:491,39,0	1/1:1,16:17:48.15:604,48,0	0/0:25,0:25:68.90:0,69,703	1/1:1,12:13:5.84:385,6,0	1/1:4,18:22:54.15:665,54,0	1/1:2,29:31:93.21:1121,93,0	1/1:0,8:8:24.08:302,24,0	0/0:20,0:20:57.13:0,57,581	0/0:21,0:21:57.12:0,57,579	0/0:15,0:15:42.08:0,42,422	1/1:1,16:17:42.13:528,42,0	1/1:1,19:20:57.18:717,57,0	1/1:3,24:28:72.23:905,72,0	1/1:2,13:15:36.12:453,36,0
chr10	67067849	.	T	TACACACACACAC	14684.84	PASS	AC=42;AF=0.778;AN=54;BaseQRankSum=-0.253;DP=616;FS=0.526;HRun=0;HaplotypeScore=217.9932;InbreedingCoeff=0.7897;MQ=62.15;MQ0=4;MQRankSum=-10.541;QD=34.55;ReadPosRankSum=-2.474;VQSLOD=3.9133;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:13:6.02:143,6,0	./.	0/0:53,0:33:43.67:0,44,1132	0/0:48,0:39:30.57:0,31,866	1/1:9,0:17:3.01:152,3,0	1/1:12,5:17:18.06:1012,18,0	1/1:24,2:27:6.02:338,6,0	1/1:31,0:29:36.12:1083,36,0	1/1:18,8:29:21.07:1175,21,0	1/1:23,3:28:47.99:1916,48,0	1/1:7,2:11:5.57:351,6,0	1/1:8,6:15:21:977,21,0	0/0:16,0:17:24.07:0,24,738	1/1:13,4:17:11.97:705,12,0	1/1:16,8:26:18.06:1057,18,0	1/1:12,6:19:22.30:1011,22,0	1/1:20,0:19:21.05:764,21,0	1/1:12,4:17:12.04:524,12,0	1/1:17,0:15:15.01:587,15,0	1/1:18,2:22:2.87:176,3,0	1/1:31,6:40:2.37:176,2,0	0/0:16,0:16:33.06:0,33,898	0/0:23,0:23:56.93:0,57,1759	0/0:27,0:28:72.21:0,72,2222	1/1:11,2:15:9.03:370,9,0	1/1:17,3:21:33.11:1204,33,0	1/1:12,0:13:18.02:611,18,0	1/1:0,6:6:6.02:353,6,0
chr10	67068022	.	TTTGTTG	T	7184.02	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=7.869;DP=512;FS=0.000;HRun=0;HaplotypeScore=107.4558;InbreedingCoeff=0.9335;MQ=55.62;MQ0=11;MQRankSum=-9.909;QD=27.85;ReadPosRankSum=1.893;VQSLOD=4.3996;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:30:29.59:0,30,314	0/0:1,0:5:11.82:0,12,74	0/0:23,0:14:13.34:0,13,649	0/0:22,0:16:21.07:0,21,542	0/0:19,0:19:39.13:0,39,1211	1/1:6,10:16:15.05:316,15,0	1/1:7,12:19:24.08:459,24,0	0/0:26,0:26:48.16:0,48,1254	1/1:3,10:12:12.04:252,12,0	1/1:6,19:24:51.10:862,51,0	1/1:4,12:16:36.08:645,36,0	1/1:5,5:10:9.03:191,9,0	0/0:17,0:17:39.13:0,39,1093	1/1:4,9:13:15.05:318,15,0	1/1:3,10:13:18.06:373,18,0	1/1:3,9:12:18.06:380,18,0	0/0:6,0:24:53.30:0,53,373	1/1:5,8:13:15.05:318,15,0	1/1:5,11:14:33.08:544,33,0	1/1:4,10:14:21.07:400,21,0	1/1:4,9:12:7.82:177,8,0	0/0:26,0:26:57.20:0,57,1702	0/0:29,0:29:57.19:0,57,1646	0/0:32,0:33:90.25:0,90,2626	1/1:8,15:23:30.10:603,30,0	1/1:4,10:14:27.09:523,27,0	1/1:7,20:27:35.91:762,36,0	1/1:0,1:1:3.01:64,3,0
chr10	67068664	.	C	CA	1700.71	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-10.379;DP=651;FS=3.204;HRun=8;HaplotypeScore=60.6321;InbreedingCoeff=0.9163;MQ=77.45;MQ0=0;MQRankSum=-1.658;QD=24.30;ReadPosRankSum=2.477;VQSLOD=4.6114;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,31:36:56.79:907,57,0	1/1:0,7:7:18.05:207,18,0	0/0:10,0:11:4.54:0,5,140	0/0:19,0:19:33:0,33,302	0/0:21,0:21:60:0,60,539	0/0:24,0:24:69.02:0,69,627	0/0:21,0:21:57.03:0,57,522	0/0:34,0:34:84.01:0,84,769	0/0:26,0:26:69.03:0,69,627	0/0:33,0:33:90.04:0,90,824	0/0:20,0:20:56.70:0,57,505	0/0:24,0:24:60.02:0,60,549	0/0:18,0:19:56.05:0,56,496	0/0:30,0:30:81.04:0,81,741	0/0:28,0:27:75.03:0,75,686	0/0:26,0:26:72.02:0,72,650	1/1:2,25:27:63.19:727,63,0	0/0:19,0:19:54.01:0,54,488	0/0:27,0:27:69.03:0,69,628	0/0:19,0:19:57.03:0,57,522	0/0:31,0:31:87.04:0,87,796	0/0:16,0:16:33:0,33,297	0/0:19,0:19:48:0,48,436	0/0:37,1:38:67.44:0,67,871	0/0:26,0:26:72.04:0,72,659	0/0:27,0:27:75.02:0,75,683	0/0:19,0:19:54.03:0,54,494	0/0:4,0:4:6:0,6,55
chr10	67068943	.	C	CA	2600.73	PASS	AB=0.917;AC=7;AF=0.125;AN=56;BaseQRankSum=7.106;DP=550;FS=11.532;HRun=8;HaplotypeScore=56.7436;InbreedingCoeff=0.7613;MQ=61.60;MQ0=3;MQRankSum=-0.311;QD=24.08;ReadPosRankSum=1.911;VQSLOD=3.8774;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,41:47:90.15:1288,90,0	1/1:2,4:7:14.88:153,15,0	0/0:11,0:7:0.03:0,0,63	0/0:21,0:11:26.50:0,26,208	0/0:15,0:15:42.02:0,42,384	0/0:23,0:23:66.02:0,66,599	0/0:22,0:22:54.01:0,54,488	0/0:25,0:25:54.02:0,54,494	0/0:18,0:18:42:0,42,384	0/0:21,0:21:60.03:0,60,549	0/0:12,0:12:30.01:0,30,275	0/0:20,0:20:42:0,42,380	0/0:14,0:14:33.01:0,33,302	0/0:14,0:14:33.01:0,33,302	0/0:22,0:22:57.02:0,57,517	0/0:10,0:10:24:0,24,220	1/1:3,39:43:99:1295,114,0	0/0:20,0:20:48.02:0,48,439	0/0:33,0:32:78.03:0,78,714	0/0:24,0:24:66.03:0,66,604	0/0:12,0:12:30.01:0,30,274	0/0:11,0:11:33.01:0,33,300	0/0:11,0:11:33.02:0,33,302	0/0:14,1:15:7.36:0,7,314	0/0:22,0:22:54.01:0,54,489	0/0:22,0:22:60.03:0,60,549	0/0:23,0:23:57.02:0,57,521	0/1:10,1:10:7.61:8,0,193
chr10	67071241	.	AGTGT	A	2625.91	PASS	AB=0.751;AC=30;AF=0.577;AN=52;BaseQRankSum=0.369;DP=534;FS=2.370;HRun=0;HaplotypeScore=102.7974;InbreedingCoeff=0.2877;MQ=69.20;MQ0=12;MQRankSum=0.186;QD=7.48;ReadPosRankSum=-1.225;VQSLOD=2.5989;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:22.34:0,22,211	0/1:3,0:8:0:0,0,0	./.	./.	1/1:9,11:20:12.76:189,13,0	1/1:11,11:22:15.05:234,15,0	0/1:23,2:25:19.77:207,0,20	0/0:22,0:21:2.98:0,3,22	1/1:8,1:11:12.03:145,12,0	1/1:18,1:18:17.63:197,18,0	0/1:10,2:12:12.07:42,0,12	1/1:22,3:24:4.93:214,5,0	0/0:13,0:13:12.13:0,12,217	1/1:9,7:16:9.03:140,9,0	0/1:15,9:25:62.39:213,0,62	1/1:7,10:17:20.97:327,21,0	0/0:17,0:17:5.30:0,5,52	0/1:18,5:23:2.92:171,0,3	0/1:9,2:12:3.48:85,0,3	1/1:7,2:9:3.01:47,3,0	1/1:31,4:34:0.74:189,1,0	0/0:16,0:16:18.02:0,18,277	0/0:9,0:10:8.77:0,9,153	0/0:25,0:25:40.96:0,41,837	1/1:8,3:11:3.01:47,3,0	0/1:20,9:27:48.60:99,0,49	1/1:12,8:20:6.02:93,6,0	0/1:1,8:10:6.93:153,0,7
chr10	67071287	.	CGT	C	496.69	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=0.283;DP=589;FS=0.772;HRun=0;HaplotypeScore=99.8966;InbreedingCoeff=0.2724;MQ=51.27;MQ0=33;MQRankSum=2.212;QD=5.78;ReadPosRankSum=-3.545;VQSLOD=2.3580;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:25:4.52:5,0,414	0/0:10,0:9:8.73:0,9,132	0/0:43,0:1:3.01:0,3,37	0/0:37,0:8:11.26:0,11,195	0/0:26,0:24:38.21:0,38,430	0/1:25,0:25:55.49:55,0,506	0/0:21,0:21:47.71:0,48,650	1/1:3,16:18:48.04:543,48,0	0/0:11,0:11:26.93:0,27,293	0/0:29,0:28:30.30:0,30,838	0/0:17,0:17:36.06:0,36,479	0/0:19,0:17:26.92:0,27,276	0/0:9,0:8:12.04:0,12,189	0/0:14,0:13:23.93:0,24,273	0/0:19,0:19:32.77:0,33,358	0/0:18,0:18:1.28:0,1,295	0/0:23,0:23:19.37:0,19,226	0/0:22,0:20:20.79:0,21,336	0/0:16,0:16:14.68:0,15,297	0/0:12,0:12:27:0,27,318	0/0:34,0:32:57.01:0,57,728	0/1:17,0:17:7.42:7,0,337	0/0:12,0:12:9.58:0,10,421	0/0:31,0:30:66.15:0,66,942	0/0:13,0:13:33.07:0,33,454	0/0:36,0:31:36.40:0,36,860	0/0:16,0:16:29.78:0,30,365	0/0:15,0:15:26.40:0,26,228
chr10	67071520	.	CT	C	883.62	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.079;DP=527;FS=3.121;HRun=8;HaplotypeScore=49.7926;InbreedingCoeff=0.6809;MQ=78.37;MQ0=0;MQRankSum=-1.022;QD=23.25;ReadPosRankSum=-4.755;VQSLOD=1.9807;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:27.08:0,27,326	0/0:9,0:9:24.05:0,24,276	0/0:12,0:12:2.09:0,2,224	0/0:12,0:12:0.42:0,0,227	0/0:21,0:21:57.12:0,57,661	0/0:19,0:19:54.17:0,54,652	0/0:13,0:13:36.11:0,36,435	1/1:4,34:38:99:978,102,0	0/0:18,0:18:51.14:0,51,605	0/0:23,0:23:69.21:0,69,834	0/0:22,0:22:66.20:0,66,797	0/0:18,0:18:48.15:0,48,580	0/0:21,0:21:60.18:0,60,724	0/0:16,0:16:42.13:0,42,507	0/0:11,0:11:33.10:0,33,399	0/0:23,0:23:66.20:0,66,797	0/0:26,0:26:69.21:0,69,833	0/0:13,0:13:39.12:0,39,471	0/0:16,0:16:39.12:0,39,471	0/0:28,0:28:78.24:0,78,942	0/0:18,0:18:48.12:0,48,558	0/0:19,0:19:51.16:0,51,616	0/0:19,0:19:51.16:0,51,616	0/0:10,0:9:24.06:0,24,277	0/0:18,0:18:51.16:0,51,616	0/0:32,0:32:96.29:0,96,1160	0/0:25,0:24:72.22:0,72,870	0/0:17,0:17:51.16:0,51,616
chr10	67072115	.	CA	C	1448.34	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=10.186;DP=629;FS=3.290;HRun=7;HaplotypeScore=63.4114;InbreedingCoeff=0.9924;MQ=71.99;MQ0=0;MQRankSum=-1.982;QD=22.28;ReadPosRankSum=3.915;VQSLOD=3.5040;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,31:34:87.19:887,87,0	1/1:2,8:10:21.04:214,21,0	0/0:14,0:14:27.06:0,27,298	0/0:8,0:9:15.03:0,15,168	0/0:31,0:31:87.23:0,87,1053	0/0:19,0:19:51.16:0,51,637	0/0:14,0:14:39.11:0,39,478	0/0:34,0:34:87.27:0,87,1084	0/0:22,0:22:54.17:0,54,672	0/0:23,0:23:66.17:0,66,811	0/0:23,0:23:66.21:0,66,829	0/0:13,0:13:39.09:0,39,464	0/0:27,0:27:81.24:0,81,1004	0/0:19,0:19:48.15:0,48,601	0/0:32,0:32:87.27:0,87,1081	0/0:25,0:25:63.20:0,63,791	1/1:2,19:21:48.11:490,48,0	0/0:15,0:15:42.13:0,42,526	0/0:22,0:22:54.17:0,54,677	0/0:40,0:40:99:0,120,1495	0/0:12,0:12:36.12:0,36,452	0/0:23,0:23:57.18:0,57,712	0/0:26,0:26:66.18:0,66,813	0/0:22,0:22:66.19:0,66,805	0/0:17,0:17:51.16:0,51,641	0/0:38,0:38:99:0,111,1386	0/0:29,0:29:84.25:0,84,1042	0/0:15,0:15:42.13:0,42,525
chr10	67072236	.	AGG	A	8168.26	PASS	AB=0.567;AC=43;AF=0.768;AN=56;BaseQRankSum=-2.283;DP=493;FS=0.474;HRun=10;HaplotypeScore=75.8534;InbreedingCoeff=0.9217;MQ=74.03;MQ0=1;MQRankSum=-3.740;QD=21.33;ReadPosRankSum=7.556;VQSLOD=3.5453;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,0:22:41.50:180,42,0	1/1:0,0:8:21.96:96,22,0	0/0:24,0:22:42.14:0,42,629	0/0:17,0:16:33.38:0,33,422	0/1:4,1:17:4.89:5,0,60	1/1:3,20:23:42.11:469,42,0	1/1:4,10:14:27.06:301,27,0	1/1:10,6:16:23.80:246,24,0	1/1:2,11:13:33.08:368,33,0	1/1:1,20:21:57.12:618,57,0	1/1:4,10:14:30.07:326,30,0	1/1:3,14:17:39.10:434,39,0	0/0:14,0:14:27.05:0,27,338	1/1:4,20:24:60.15:668,60,0	1/1:2,16:18:30.08:334,30,0	1/1:2,21:23:48.13:534,48,0	1/1:2,0:22:46.65:204,47,0	1/1:2,11:13:30.07:334,30,0	1/1:2,13:14:36.07:392,36,0	1/1:3,21:23:48.07:521,48,0	1/1:0,12:12:30.08:334,30,0	0/0:17,0:19:32.38:0,32,410	0/0:15,0:15:21.06:0,21,289	0/0:21,0:21:38.80:0,39,525	1/1:2,14:16:33.09:368,33,0	1/1:1,20:21:57.13:634,57,0	1/1:1,17:18:51.14:568,51,0	1/1:3,9:12:21.04:234,21,0
chr10	67072245	.	GGT	G	1851.06	PASS	AB=0.986;AC=24;AF=0.429;AN=56;BaseQRankSum=6.017;DP=493;FS=12.121;HRun=0;HaplotypeScore=94.2038;InbreedingCoeff=0.0138;MQ=74.17;MQ0=1;MQRankSum=-1.277;QD=5.21;ReadPosRankSum=9.534;VQSLOD=0.1703;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:22:0.15:0,0,78	0/0:8,0:8:12.09:0,12,37	0/0:23,0:21:63.12:0,63,815	0/0:17,0:16:26.78:0,27,421	0/0:16,0:16:15.31:0,15,131	0/1:24,0:24:27.73:108,0,28	0/1:16,0:16:58.90:59,0,96	0/1:25,0:25:14.86:15,0,278	0/1:15,0:15:33.10:70,0,33	0/1:23,0:23:33.16:144,0,33	0/1:13,1:14:17.86:125,0,18	1/1:15,1:16:33.47:167,33,0	0/0:10,0:10:23.62:0,24,297	1/1:22,1:23:47.73:261,48,0	1/1:16,0:16:25.05:119,25,0	0/1:24,0:24:14.86:138,0,15	0/0:20,0:20:12.38:0,12,51	1/1:12,0:12:4.29:85,4,0	0/1:16,0:15:31.60:59,0,32	0/1:23,1:23:14.37:123,0,14	0/1:16,0:16:22.92:78,0,23	0/0:14,0:14:35.82:0,36,401	0/0:10,0:10:26.97:0,27,296	0/0:20,0:20:19.69:0,20,459	1/1:15,0:15:4.34:85,4,0	0/1:22,1:23:4.94:167,0,5	0/1:20,1:21:16:173,0,16	0/1:10,0:10:3.08:51,0,3
chr10	67072324	.	A	ATGGGTTAACACAATAAT	9281.67	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-1.320;DP=549;FS=0.000;HRun=0;HaplotypeScore=231.7173;InbreedingCoeff=0.9783;MQ=77.04;MQ0=1;MQRankSum=-10.376;QD=175.13;ReadPosRankSum=-0.948;VQSLOD=4.3419;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:21,14:35:90.27:5721,90,0	1/1:1,2:4:9.03:756,9,0	0/0:17,0:17:42.12:0,42,1311	0/0:23,0:23:59.86:0,60,2020	0/0:27,0:27:78.27:0,78,3667	0/0:27,0:27:65.72:0,66,3083	0/0:11,0:11:33.11:0,33,1439	0/0:24,0:24:72.25:0,72,2920	0/0:11,0:11:33.11:0,33,1624	0/0:23,0:23:69.23:0,69,3208	0/0:21,0:21:60.21:0,60,2806	0/0:14,0:14:36.12:0,36,1370	0/0:23,0:23:69.22:0,69,3215	0/0:14,0:14:39.13:0,39,1632	0/0:20,0:20:48.16:0,48,2311	0/0:24,0:24:66.23:0,66,3313	1/1:6,7:14:42.14:2805,42,0	0/0:10,0:10:30.10:0,30,1430	0/0:23,0:23:66.20:0,66,2628	0/0:30,0:29:87.22:0,87,3331	0/0:34,0:34:99:0,99,4841	0/0:12,0:12:36.12:0,36,1682	0/0:18,0:18:54.17:0,54,2453	0/0:16,0:16:45.15:0,45,2064	0/0:15,0:15:33.09:0,33,1326	0/0:19,0:19:57.20:0,57,2525	0/0:27,0:27:75.26:0,75,3304	0/0:13,0:13:36.12:0,36,1210
chr10	67072920	.	AG	A	13365.79	PASS	AC=40;AF=0.769;AN=52;BaseQRankSum=10.629;DP=902;FS=17.961;HRun=2;HaplotypeScore=62.5092;InbreedingCoeff=0.9624;MQ=44.22;MQ0=106;MQRankSum=3.010;QD=20.72;ReadPosRankSum=1.846;VQSLOD=3.5417;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,39:30:18.06:233,18,0	1/1:2,17:17:27.09:350,27,0	./.	./.	0/0:31,0:28:63.20:0,63,922	1/1:2,16:18:33.11:429,33,0	1/1:11,21:23:27.09:348,27,0	0/0:40,0:19:51.17:0,51,764	1/1:3,28:29:60.19:777,60,0	1/1:3,36:35:99:1272,99,0	1/1:1,16:16:39.13:506,39,0	1/1:6,42:45:96.31:1245,96,0	0/0:35,0:33:75.25:0,75,1116	1/1:3,29:31:69.22:896,69,0	1/1:9,34:37:66.21:857,66,0	1/1:4,37:37:96.31:1246,96,0	1/1:8,16:14:3.01:39,3,0	1/1:3,27:27:45.15:584,45,0	1/1:6,16:15:36.12:467,36,0	1/1:8,18:22:51.16:649,51,0	1/1:9,43:42:42.14:545,42,0	0/0:31,0:23:42.14:0,42,628	0/0:31,0:23:54.18:0,54,809	0/0:44,0:38:66.22:0,66,989	1/1:4,16:17:33.11:429,33,0	1/1:9,27:29:75.24:974,75,0	1/1:6,28:28:72.23:935,72,0	1/1:17,20:30:45.15:584,45,0
chr10	67075175	.	T	TTGG	228.70	PASS	AC=4;AF=0.074;AN=54;BaseQRankSum=0.634;DP=638;FS=5.445;HRun=0;HaplotypeScore=89.3762;InbreedingCoeff=0.9252;MQ=57.91;MQ0=2;MQRankSum=-0.835;QD=14.29;ReadPosRankSum=-2.289;VQSLOD=2.2741;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,8:6:12.04:203,12,0	./.	0/0:21,0:18:51.17:0,51,752	0/0:18,0:15:32.50:0,33,477	0/0:29,0:29:51.17:0,51,785	0/0:30,0:30:78.23:0,78,1206	0/0:21,0:21:51.17:0,51,807	0/0:35,0:35:93.28:0,93,1424	0/0:14,0:14:39.13:0,39,619	0/0:25,0:25:60.20:0,60,939	0/0:13,0:13:29.92:0,30,444	0/0:25,0:25:60.20:0,60,951	0/0:28,0:29:71.03:0,71,1179	0/0:23,1:23:63.21:0,63,995	0/0:26,0:26:75.26:0,75,1187	0/0:28,0:28:81.26:0,81,1260	1/1:4,4:7:6.02:131,6,0	0/0:26,0:26:72.20:0,72,1114	0/0:22,0:22:51.13:0,51,779	0/0:28,0:28:78.26:0,78,1215	0/0:32,0:32:93.30:0,93,1441	0/0:26,0:26:66.21:0,66,1014	0/0:16,0:16:39.13:0,39,616	0/0:20,0:20:51.17:0,51,804	0/0:18,0:18:51.17:0,51,805	0/0:25,0:25:72.21:0,72,1064	0/0:39,0:39:99:0,108,1689	0/0:21,0:19:54.17:0,54,834
chr10	67076553	.	GA	G	765.03	PASS	AB=0.883;AC=18;AF=0.321;AN=56;BaseQRankSum=6.133;DP=517;FS=1.561;HRun=14;HaplotypeScore=65.0705;InbreedingCoeff=0.2116;MQ=56.32;MQ0=10;MQRankSum=3.745;QD=2.79;ReadPosRankSum=3.769;VQSLOD=-0.7137;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,23:35:20.79:272,21,0	1/1:2,9:11:20.78:143,21,0	0/0:6,0:1:2.68:0,3,11	0/1:19,0:4:1.06:1,0,30	1/1:6,9:17:25.72:165,26,0	0/1:21,4:25:32.13:32,0,325	0/1:11,3:14:34.88:35,0,121	0/0:16,0:26:38.57:0,39,233	0/0:21,0:21:30.39:0,30,256	0/0:17,0:17:32.97:0,33,291	0/1:28,1:28:12.53:13,0,199	0/0:18,0:18:32.80:0,33,275	0/1:11,2:13:5.47:5,0,220	0/1:16,1:19:0.61:1,0,142	0/0:18,0:20:43.80:0,44,357	0/0:19,1:20:15.45:0,15,284	1/1:2,12:14:31.76:211,32,0	0/0:15,0:14:30.01:0,30,270	0/0:11,0:11:20.86:0,21,181	0/1:21,2:23:5.05:5,0,238	0/1:11,2:13:7.80:8,0,192	0/0:14,0:14:18.48:0,18,164	0/0:19,0:20:29.10:0,29,282	0/0:10,0:11:21.10:0,21,214	0/1:19,1:23:7.75:8,0,297	0/0:19,2:21:0.52:0,1,260	0/0:19,1:21:3.26:0,3,326	0/1:10,2:12:35.57:36,0,150
chr10	67077029	.	T	TG	9295.55	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-13.394;DP=555;FS=2.022;HRun=8;HaplotypeScore=49.4464;InbreedingCoeff=0.9890;MQ=83.69;MQ0=1;MQRankSum=-2.247;QD=27.42;ReadPosRankSum=2.329;VQSLOD=5.4904;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,1:23:22.40:0,22,456	0/0:7,0:7:18:0,18,165	0/0:25,0:24:23.86:0,24,239	0/0:13,1:14:14.88:0,15,171	0/0:29,0:29:78.03:0,78,713	1/1:1,18:18:48.14:554,48,0	1/1:2,14:18:38.95:429,39,0	0/0:24,0:24:69:0,69,621	1/1:3,14:17:11.65:388,12,0	1/1:2,14:16:17.64:445,18,0	1/1:1,13:14:31.77:439,32,0	1/1:3,23:26:69.16:774,69,0	0/0:10,0:10:24.01:0,24,220	1/1:1,10:11:27.08:312,27,0	1/1:2,18:20:45.13:519,45,0	1/1:0,17:17:42.12:485,42,0	0/0:27,0:27:72.01:0,72,654	1/1:0,17:17:42.12:485,42,0	1/1:7,17:24:26.70:561,27,0	1/1:2,19:21:51.15:588,51,0	1/1:2,16:18:39.12:450,39,0	0/0:13,0:13:36.02:0,36,329	0/0:18,0:18:42.01:0,42,384	0/0:25,0:25:59.68:0,60,543	1/1:3,22:25:45.13:519,45,0	1/1:3,25:28:75.22:863,75,0	1/1:4,22:26:63.19:724,63,0	1/1:0,22:22:66.20:761,66,0
chr10	67077544	.	CAAAAAA	C	9545.78	PASS	AB=0.667;AC=33;AF=0.589;AN=56;BaseQRankSum=4.382;DP=529;FS=12.928;HRun=17;HaplotypeScore=129.4651;InbreedingCoeff=0.8996;MQ=59.69;MQ0=0;MQRankSum=-12.273;QD=31.09;ReadPosRankSum=8.872;VQSLOD=1.4977;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:28:13.71:0,14,179	0/0:3,0:13:9.62:0,10,94	0/0:20,0:16:30.51:0,31,673	0/0:16,0:13:18.03:0,18,294	0/0:26,0:30:75.17:0,75,1780	1/1:7,21:29:53.65:905,54,0	1/1:1,7:8:11.96:210,12,0	0/0:23,0:20:43.38:0,43,1126	1/1:6,22:29:57.29:939,57,0	1/1:4,12:18:38.99:646,39,0	1/1:5,11:16:23.74:419,24,0	1/1:4,11:15:33.02:575,33,0	0/0:19,0:20:57.20:0,57,1484	1/1:6,10:17:26.90:452,27,0	1/1:4,13:19:35.96:594,36,0	1/1:4,14:18:32.68:576,33,0	0/0:13,0:20:15.78:0,16,102	0/1:5,4:10:3.19:227,0,3	1/1:5,10:15:26.80:428,27,0	1/1:3,21:25:53.75:925,54,0	1/1:2,10:12:1.86:99,2,0	0/0:10,0:12:30.10:0,30,780	0/0:18,0:22:54.17:0,54,1332	0/0:17,0:17:21.07:0,21,589	1/1:3,19:22:54.04:943,54,0	1/1:10,16:27:18.52:737,19,0	1/1:7,13:20:32.48:575,32,0	1/1:2,4:7:17.98:297,18,0
chr10	67079102	.	C	CA	2611.17	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-8.843;DP=622;FS=4.199;HRun=6;HaplotypeScore=63.8491;InbreedingCoeff=0.9377;MQ=78.14;MQ0=0;MQRankSum=-6.291;QD=31.09;ReadPosRankSum=2.126;VQSLOD=4.4659;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,41:44:99:1396,111,0	1/1:1,6:7:18.06:226,18,0	0/0:15,0:15:45.09:0,45,453	0/0:17,0:17:36.01:0,36,350	0/0:19,0:19:51.10:0,51,514	0/0:14,0:14:42.10:0,42,429	0/0:24,0:24:69.16:0,69,704	0/0:29,0:29:74.38:0,74,742	0/0:21,0:21:63.13:0,63,636	0/0:25,0:25:69.15:0,69,702	0/0:18,0:18:54.12:0,54,551	0/0:23,0:23:63.14:0,63,643	0/0:30,0:30:87.17:0,87,879	0/0:34,0:34:87.19:0,87,887	0/0:23,0:23:69.16:0,69,704	0/0:15,0:14:42.10:0,42,429	1/1:1,32:33:90.29:1130,90,0	0/0:18,0:18:45.10:0,45,459	0/0:19,0:19:45.09:0,45,459	0/0:25,0:25:72.16:0,72,735	0/0:29,0:29:84.19:0,84,857	0/0:34,0:34:93.19:0,93,938	0/0:24,0:24:63.13:0,63,636	0/0:23,0:23:66.15:0,66,673	0/0:17,0:17:45.10:0,45,459	0/0:17,0:17:45.10:0,45,459	0/0:24,0:24:66.15:0,66,673	0/0:1,0:1:3.01:0,3,31
chr10	67079500	.	TAAC	T	1039.90	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.827;DP=580;FS=1.625;HRun=0;HaplotypeScore=78.1747;InbreedingCoeff=0.9993;MQ=77.43;MQ0=0;MQRankSum=-3.120;QD=34.66;ReadPosRankSum=-3.791;VQSLOD=3.0642;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:61.45:0,61,1267	0/0:12,0:12:36.12:0,36,787	0/0:13,0:13:36.12:0,36,728	0/0:13,0:13:33.08:0,33,644	0/0:28,0:28:78.27:0,78,1705	0/0:21,0:21:63.20:0,63,1335	0/0:19,0:19:48.16:0,48,1024	1/1:5,24:30:75.23:1135,75,0	0/0:15,0:15:42.14:0,42,888	0/0:31,0:31:81.28:0,81,1735	0/0:28,0:27:81.28:0,81,1725	0/0:16,0:16:45.15:0,45,925	0/0:23,0:23:66.23:0,66,1436	0/0:24,0:24:66.23:0,66,1426	0/0:23,0:23:63.22:0,63,1340	0/0:20,0:20:54.19:0,54,1176	0/0:17,0:17:45.14:0,45,941	0/0:14,0:14:39.06:0,39,743	0/0:16,0:16:45.15:0,45,947	0/0:27,0:27:75.26:0,75,1638	0/0:18,0:18:54.19:0,54,1143	0/0:22,0:22:60.21:0,60,1294	0/0:23,0:23:63.15:0,63,1313	0/0:16,0:16:45.15:0,45,930	0/0:16,0:16:45.15:0,45,938	0/0:25,0:25:72.23:0,72,1485	0/0:25,0:25:75.26:0,75,1612	0/0:22,0:22:60.21:0,60,1231
chr10	67079669	.	C	CA	6758.68	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-3.165;DP=560;FS=5.839;HRun=11;HaplotypeScore=73.1175;InbreedingCoeff=0.9234;MQ=76.97;MQ0=0;MQRankSum=-1.352;QD=19.37;ReadPosRankSum=0.413;VQSLOD=5.8957;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:53.75:0,54,418	0/0:9,0:9:23.91:0,24,186	0/0:16,0:16:5.83:0,6,169	0/0:12,0:12:5.07:0,5,28	0/0:21,0:22:40.81:0,41,305	1/1:4,12:16:27.05:274,27,0	1/1:7,16:23:20.20:398,20,0	0/0:36,1:37:62.19:0,62,664	1/1:5,19:24:36.07:366,36,0	1/1:4,16:21:49.14:484,49,0	1/1:9,20:29:47.36:632,47,0	1/1:5,14:19:1.71:188,2,0	0/0:22,0:22:53.75:0,54,415	1/1:2,24:26:33.88:525,34,0	1/1:5,14:19:36.07:365,36,0	1/1:3,14:17:12.88:312,13,0	0/0:16,0:16:41.79:0,42,325	1/1:3,10:13:30.02:294,30,0	1/1:3,16:19:45.06:444,45,0	1/1:5,20:25:54.10:542,54,0	1/1:0,8:8:21.04:213,21,0	0/0:19,0:19:47.39:0,47,356	0/0:25,0:25:23.19:0,23,342	0/0:12,0:12:32.87:0,33,255	1/1:4,16:21:9.68:265,10,0	1/1:7,18:25:54.51:514,55,0	1/1:4,25:29:66.13:670,66,0	1/1:4,11:15:27.05:274,27,0
chr10	67080075	.	AAAGGCCTGTATTTC	A	1879.20	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.904;DP=600;FS=2.091;HRun=0;HaplotypeScore=243.3693;InbreedingCoeff=0.9556;MQ=69.71;MQ0=0;MQRankSum=-6.436;QD=89.49;ReadPosRankSum=-0.875;VQSLOD=3.1707;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,105,6860	0/0:5,0:5:15.05:0,15,1060	0/0:20,0:18:54.19:0,54,2864	0/0:26,0:25:69.23:0,69,3729	0/0:22,0:22:66.23:0,66,4271	0/0:18,0:18:48.16:0,48,3041	0/0:22,0:22:63.22:0,63,4077	1/1:6,15:21:48.16:1974,48,0	0/0:19,0:19:57.18:0,57,3534	0/0:19,0:19:54.17:0,54,3476	0/0:20,0:20:60.21:0,60,3465	0/0:21,0:21:57.18:0,57,3815	0/0:22,0:22:66.23:0,66,4289	0/0:17,0:17:51.18:0,51,3378	0/0:25,0:25:72.25:0,72,4484	0/0:21,0:21:57.20:0,57,3633	0/0:24,0:24:63.22:0,63,4174	0/0:26,0:26:75.23:0,75,4150	0/0:16,0:16:45.15:0,45,2442	0/0:33,0:33:96.33:0,96,6316	0/0:15,0:15:45.15:0,45,2768	0/0:27,0:26:78.27:0,78,5183	0/0:21,0:21:60.21:0,60,3727	0/0:21,0:21:57.20:0,57,3613	0/0:23,0:23:66.21:0,66,4360	0/0:27,0:27:78.27:0,78,5445	0/0:26,0:26:78.27:0,78,4908	0/0:4,0:4:12.04:0,12,848
chr10	67080112	.	GT	G	9580.45	PASS	AB=0.550;AC=41;AF=0.732;AN=56;BaseQRankSum=7.859;DP=590;FS=0.786;HRun=10;HaplotypeScore=80.3846;InbreedingCoeff=0.9288;MQ=77.01;MQ0=0;MQRankSum=-1.182;QD=21.20;ReadPosRankSum=1.611;VQSLOD=5.6787;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,29:32:83.02:709,83,0	0/1:2,9:11:3.19:204,0,3	0/0:16,0:15:27.95:0,28,253	0/0:17,0:17:21.46:0,21,315	0/0:22,0:23:69.02:0,69,744	1/1:2,13:15:38.99:339,39,0	1/1:7,17:24:25.32:368,25,0	1/1:11,21:32:62.93:547,63,0	1/1:1,18:19:53.99:469,54,0	1/1:3,16:19:47.98:416,48,0	1/1:2,19:21:50.97:443,51,0	1/1:3,20:23:56.98:495,57,0	0/0:23,0:23:63.16:0,63,689	1/1:2,13:15:41.99:364,42,0	1/1:1,19:20:56.98:495,57,0	1/1:3,13:16:38.99:339,39,0	1/1:2,19:21:50.03:422,50,0	1/1:1,19:20:56.99:495,57,0	1/1:7,14:22:13.94:337,14,0	1/1:3,32:35:89.97:781,90,0	1/1:5,16:21:17.83:384,18,0	0/0:27,0:26:66.17:0,66,723	0/0:18,0:18:51.14:0,51,563	0/0:14,0:14:39.11:0,39,431	1/1:1,21:22:53.99:469,54,0	1/1:2,20:22:56.95:489,57,0	1/1:2,35:37:99:886,102,0	1/1:0,5:5:15:130,15,0
chr10	67081722	.	TTATA	T	12668.41	PASS	AC=36;AF=0.667;AN=54;BaseQRankSum=-1.265;DP=441;FS=3.989;HRun=0;HaplotypeScore=89.4952;InbreedingCoeff=0.8792;MQ=66.10;MQ0=0;MQRankSum=-1.590;QD=36.83;ReadPosRankSum=4.035;VQSLOD=4.7352;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:6:3.01:0,3,48	./.	1/1:4,0:5:5.69:45,6,0	0/0:4,0:4:4.88:0,5,20	0/0:1,0:11:24.08:0,24,425	1/1:3,15:18:42.14:721,42,0	1/1:6,15:21:45.15:772,45,0	0/0:5,0:26:61.92:0,62,298	1/1:2,15:18:36.12:618,36,0	1/1:4,23:27:69.18:1102,69,0	1/1:6,8:14:24.04:380,24,0	1/1:1,11:12:30.10:515,30,0	0/0:21,0:21:54.19:0,54,1351	1/1:1,16:17:39.09:638,39,0	1/1:2,13:15:36.12:618,36,0	1/1:5,20:25:60.17:999,60,0	0/0:12,0:12:2.98:0,3,22	1/1:4,18:22:48.16:824,48,0	1/1:7,15:22:42.13:683,42,0	1/1:3,22:25:60.16:998,60,0	1/1:4,19:23:45.15:756,45,0	0/0:2,0:2:6.02:0,6,122	0/0:7,0:7:12.04:0,12,302	0/0:8,0:8:18.05:0,18,395	1/1:4,15:20:45.15:749,45,0	1/1:3,14:17:39.11:634,39,0	1/1:7,20:27:57.15:947,57,0	1/1:2,14:16:39.13:669,39,0
chr10	67082368	.	G	GTGTT	3654.57	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-11.239;DP=737;FS=0.000;HRun=0;HaplotypeScore=141.0201;InbreedingCoeff=0.9945;MQ=69.66;MQ0=1;MQRankSum=-2.218;QD=32.92;ReadPosRankSum=-1.043;VQSLOD=3.2864;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:14,24:40:69.24:1689,69,0	1/1:1,5:6:15.05:367,15,0	0/0:34,0:30:41.86:0,42,558	0/0:20,0:21:24.07:0,24,363	0/0:36,0:36:96.27:0,96,1497	0/0:20,0:20:42.13:0,42,666	0/0:23,0:23:42.13:0,42,670	1/1:21,8:29:27.02:422,27,0	0/0:26,0:26:69.22:0,69,1111	0/0:14,0:14:30.10:0,30,495	0/0:28,0:28:72.23:0,72,1161	0/0:29,0:29:66.21:0,66,1059	0/0:41,0:41:87.25:0,87,1393	0/0:35,0:35:79.48:0,79,1330	0/0:28,0:28:72.23:0,72,1164	0/0:22,0:22:60.21:0,60,987	1/1:12,21:34:48.16:1177,48,0	0/0:22,0:22:45.12:0,45,714	0/0:31,0:30:57.19:0,57,911	0/0:25,0:25:66.23:0,66,1081	0/0:23,0:23:54.16:0,54,865	0/0:23,0:23:57.16:0,57,865	0/0:18,0:18:48.16:0,48,792	0/0:24,0:24:43.54:0,44,840	0/0:33,0:33:78.27:0,78,1287	0/0:26,0:26:60.20:0,60,986	0/0:29,0:29:72.22:0,72,1154	0/0:15,0:15:42.09:0,42,616
chr10	67083139	.	GGCCCTGGGTTCGGTCCCCA	G	828.93	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=1.591;DP=487;FS=13.113;HRun=0;HaplotypeScore=248.5838;InbreedingCoeff=0.7201;MQ=54.16;MQ0=19;MQRankSum=-5.112;QD=34.54;ReadPosRankSum=-2.048;VQSLOD=1.0817;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:31:83.87:0,84,6399	0/0:4,0:4:12.04:0,12,482	0/0:11,0:1:3.01:0,3,185	0/0:11,0:2:5.93:0,6,216	0/0:25,0:25:72.25:0,72,6326	0/0:15,0:12:36.12:0,36,3231	0/0:25,0:22:60.21:0,60,4227	1/1:19,5:23:29.94:923,30,0	0/0:16,0:16:45.15:0,45,3632	0/0:13,0:13:39.12:0,39,2705	0/0:13,0:13:33.11:0,33,3007	0/0:11,0:10:21.07:0,21,1887	0/0:11,0:11:30.10:0,30,2706	0/0:15,0:15:45.13:0,45,2903	0/0:15,0:15:42.14:0,42,3043	0/0:15,0:15:45.13:0,45,3104	0/0:33,0:33:81.28:0,81,6435	0/0:28,0:28:78.27:0,78,6437	0/0:20,0:20:54.19:0,54,3090	0/0:24,0:24:61.09:0,61,4863	0/0:19,0:16:39.11:0,39,2388	0/0:21,0:20:54.19:0,54,4757	0/0:14,0:14:41.17:0,41,3075	0/0:26,0:26:69.24:0,69,5724	0/0:9,0:9:21.07:0,21,1713	0/0:15,0:15:42.14:0,42,3729	0/0:17,0:17:45.14:0,45,3834	0/0:3,0:3:9.03:0,9,773
chr10	67083166	.	AG	A	4233.13	PASS	AB=1.000;AC=42;AF=0.750;AN=56;BaseQRankSum=10.139;DP=498;FS=0.914;HRun=3;HaplotypeScore=98.5764;InbreedingCoeff=0.7746;MQ=59.09;MQ0=16;MQRankSum=-3.371;QD=11.29;ReadPosRankSum=-0.423;VQSLOD=2.7402;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:33,0:30:62.11:504,62,0	1/1:3,0:3:3:26,3,0	0/1:25,0:8:0.99:1,0,59	0/0:25,0:8:3.79:0,4,92	0/0:32,0:32:82.71:0,83,986	1/1:19,0:16:10.04:86,10,0	1/1:18,1:17:36.62:229,37,0	1/1:18,1:20:41.81:328,42,0	1/1:12,1:13:17.04:151,17,0	1/1:17,0:15:33.37:211,33,0	1/1:15,0:15:31.06:210,31,0	1/1:14,0:13:19.20:122,19,0	0/0:9,0:9:22.32:0,22,299	1/1:12,0:12:18.64:103,19,0	1/1:12,0:12:26.16:158,26,0	0/1:12,0:11:14.71:125,0,15	1/1:35,0:35:80.94:684,81,0	1/1:24,1:25:55.89:314,56,0	1/1:19,0:19:29.06:211,29,0	1/1:18,0:18:33.80:213,34,0	1/1:12,1:12:19.74:134,20,0	0/0:20,0:19:46.69:0,47,448	0/0:12,0:12:36.09:0,36,460	0/0:25,0:25:56.64:0,57,728	1/1:10,0:10:15.25:98,15,0	1/1:16,0:16:22.97:152,23,0	1/1:21,0:21:16.95:119,17,0	1/1:4,0:4:10.36:55,10,0
chr10	67083168	.	G	GA	2133.19	PASS	AB=0.707;AC=28;AF=0.500;AN=56;BaseQRankSum=1.677;DP=517;FS=0.000;HRun=0;HaplotypeScore=115.1385;InbreedingCoeff=0.4297;MQ=60.31;MQ0=16;MQRankSum=-0.210;QD=7.87;ReadPosRankSum=-1.377;VQSLOD=3.3268;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:30:32.28:0,32,87	0/0:0,0:3:1.55:0,2,4	0/0:26,0:8:14.13:0,14,138	0/0:26,0:9:12.98:0,13,125	0/0:34,0:34:87.17:0,87,1133	0/1:11,5:16:35.83:125,0,36	1/1:12,5:17:9.65:156,10,0	0/0:2,0:21:12.34:0,12,71	1/1:10,3:13:1.01:94,1,0	1/1:5,12:17:27.66:215,28,0	1/1:6,8:16:14.84:122,15,0	1/1:4,11:14:11.59:104,12,0	0/0:9,0:9:24.08:0,24,333	1/1:5,5:10:2.25:120,2,0	1/1:7,6:13:7.76:168,8,0	0/1:9,5:13:27.86:112,0,28	0/0:1,0:36:46.70:0,47,127	1/1:12,12:25:15.32:333,15,0	0/1:17,5:22:17.29:146,0,17	1/1:7,12:19:3.70:148,4,0	1/1:9,5:13:5.33:82,5,0	0/0:19,0:18:51.15:0,51,678	0/0:14,0:14:35.01:0,35,497	0/0:25,0:25:66.11:0,66,839	0/1:3,7:10:2.66:88,0,3	0/1:13,5:18:14.17:76,0,14	0/1:8,12:21:29.88:161,0,30	1/1:0,3:4:6.14:75,6,0
chr10	67083169	.	GA	G	338.02	PASS	AB=0.915;AC=10;AF=0.179;AN=56;BaseQRankSum=2.385;DP=538;FS=3.545;HRun=13;HaplotypeScore=126.7460;InbreedingCoeff=0.6134;MQ=60.85;MQ0=16;MQRankSum=1.119;QD=2.40;ReadPosRankSum=3.781;VQSLOD=0.2648;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:33,0:30:32.78:114,33,0	1/1:3,0:3:2.22:7,2,0	0/1:27,1:9:0.17:0,0,73	0/0:25,1:10:4.36:0,4,113	0/0:30,1:34:55.75:0,56,639	0/0:20,0:17:43.59:0,44,283	0/0:19,0:17:12.31:0,12,118	1/1:22,0:22:13.55:147,14,0	0/0:13,0:13:12.16:0,12,112	0/0:23,0:21:38.23:0,38,233	0/0:17,0:17:25.99:0,26,147	0/0:15,0:14:17.25:0,17,93	0/0:9,1:10:2.13:0,2,182	0/0:12,0:12:28.89:0,29,174	0/0:13,0:13:23.86:0,24,133	0/0:16,0:15:31.95:0,32,204	1/1:36,0:36:59.58:180,60,0	0/0:26,0:26:46.43:0,46,303	0/0:22,0:22:44.10:0,44,274	0/0:22,0:22:35.36:0,35,216	0/0:15,0:14:14.50:0,14,116	0/1:15,2:18:38.23:38,0,157	0/0:14,0:14:21.17:0,21,268	0/0:22,2:24:13.31:0,13,452	0/0:10,0:10:17.31:0,17,104	0/0:22,0:22:42.36:0,42,292	0/0:20,0:20:40.37:0,40,270	0/0:4,0:4:0.65:0,1,32
chr10	67084486	.	C	CCTTCCTTT	4182.69	PASS	AB=1.000;AC=22;AF=0.407;AN=54;BaseQRankSum=-7.384;DP=683;FS=0.331;HRun=0;HaplotypeScore=252.5923;InbreedingCoeff=-0.0582;MQ=55.32;MQ0=5;MQRankSum=-4.327;QD=8.52;ReadPosRankSum=-7.715;VQSLOD=0.1376;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:26,8:33:72.64:1127,73,0	1/1:8,2:10:26.91:435,27,0	./.	0/0:7,0:3:2.99:0,3,23	0/0:24,0:24:39.84:0,40,695	0/1:32,0:32:59.30:59,0,1016	0/1:32,0:32:28.13:28,0,785	1/1:45,0:45:99:1017,101,0	0/1:31,0:31:61.35:61,0,830	0/1:20,0:20:71.83:72,0,521	0/1:18,0:18:89.86:90,0,412	0/1:29,0:29:92.72:93,0,777	0/0:19,0:19:57.12:0,57,1187	0/1:23,0:23:45:45,0,721	0/1:34,0:34:4.32:4,0,1163	0/0:33,0:33:32.01:0,32,1089	1/1:24,2:24:42.89:709,43,0	0/1:14,0:14:11.01:11,0,383	0/1:27,0:24:99:158,0,490	0/1:24,0:24:99:112,0,672	0/1:45,0:45:4.82:5,0,1455	0/0:12,0:12:29.99:0,30,607	0/0:18,0:18:48.06:0,48,840	0/0:35,0:34:96.18:0,96,1806	0/1:20,0:20:99:106,0,511	0/0:18,0:18:51.12:0,51,679	0/1:27,0:27:50.82:51,0,846	0/0:16,0:16:43.97:0,44,770
chr10	67084513	.	CCCATCCATCCATCCATCCAT	C	1213.25	PASS	AB=0.686;AC=5;AF=0.089;AN=56;BaseQRankSum=5.343;DP=717;FS=1.154;HRun=0;HaplotypeScore=391.6408;InbreedingCoeff=0.6340;MQ=55.60;MQ0=8;MQRankSum=-5.510;QD=20.56;ReadPosRankSum=0.709;VQSLOD=0.8803;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:19,16:35:85.64:774,0,86	1/1:4,4:8:6.02:289,6,0	0/0:32,0:5:6.02:0,6,228	0/0:30,0:10:8.48:0,8,350	0/0:15,0:26:51.18:0,51,2527	0/0:32,0:32:72.25:0,72,5509	0/0:34,0:34:54.14:0,54,3466	0/0:32,0:32:48.16:0,48,2176	0/0:36,0:36:87.28:0,87,6187	0/0:18,0:18:37.65:0,38,2074	0/0:15,0:14:36.12:0,36,2339	0/0:27,0:27:57.20:0,57,4367	0/0:19,0:19:33.11:0,33,2065	0/0:31,0:31:78.25:0,78,4809	0/0:43,0:43:99:0,99,7124	0/0:31,0:31:72.22:0,72,5604	1/1:9,7:15:8.11:263,8,0	0/0:15,0:16:33.11:0,33,2147	0/0:20,0:20:30.09:0,30,2273	0/0:23,0:23:54.19:0,54,3423	0/0:42,0:42:87.28:0,87,6760	0/0:11,0:11:24.08:0,24,1279	0/0:21,0:20:48.16:0,48,3404	0/0:34,0:34:93.32:0,93,6527	0/0:18,0:18:36.12:0,36,2660	0/0:26,0:26:60.21:0,60,4709	0/0:24,0:24:39.13:0,39,2589	0/0:17,0:17:30.10:0,30,2066
chr10	67084755	.	A	ACTC	13272.56	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-13.426;DP=695;FS=7.867;HRun=0;HaplotypeScore=129.9976;InbreedingCoeff=0.9986;MQ=71.68;MQ0=0;MQRankSum=-6.686;QD=55.53;ReadPosRankSum=1.496;VQSLOD=6.7738;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,41:48:99:2377,106,0	1/1:0,11:11:33.11:747,33,0	0/0:15,0:15:36.12:0,36,567	0/0:13,0:13:32.77:0,33,464	1/1:1,21:22:54.19:1206,54,0	0/0:32,0:32:93.30:0,93,1523	0/0:18,0:18:54.18:0,54,899	1/1:12,33:45:99:2714,129,0	0/0:20,0:20:57.19:0,57,949	0/0:31,0:31:90.31:0,90,1498	0/0:24,0:24:66.21:0,66,1071	0/0:26,0:26:72.25:0,72,1199	1/1:1,17:22:47.72:1064,48,0	0/0:26,0:26:75.24:0,75,1220	0/0:28,0:28:75.26:0,75,1249	0/0:23,0:23:69.22:0,69,1123	1/1:2,18:21:48.16:1087,48,0	0/0:6,0:6:18.02:0,18,270	0/0:26,0:26:78.27:0,78,1291	0/0:25,0:25:72.25:0,72,1192	0/0:28,0:28:81.26:0,81,1324	1/1:2,21:24:60.21:1359,60,0	1/1:2,16:19:51.18:1139,51,0	1/1:0,26:27:72.11:1579,72,0	0/0:23,0:23:57.18:0,57,918	0/0:29,0:29:78.26:0,78,1274	0/0:34,0:34:90.25:0,90,1404	0/0:29,0:29:81.28:0,81,1349
chr10	67085107	.	GTT	G	757.87	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-1.244;DP=459;FS=1.694;HRun=8;HaplotypeScore=125.2367;InbreedingCoeff=0.8289;MQ=72.05;MQ0=6;MQRankSum=0.212;QD=25.26;ReadPosRankSum=-2.232;VQSLOD=2.3818;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:12.96:0,13,90	0/0:6,0:6:11.62:0,12,125	0/0:23,0:17:10.93:0,11,455	0/0:18,0:15:28.29:0,28,352	0/0:27,0:26:75.26:0,75,1243	0/0:13,0:13:31.61:0,32,222	0/0:3,0:3:8.81:0,9,86	1/1:5,25:29:55.29:853,55,0	0/0:17,0:17:32.31:0,32,303	0/0:17,0:17:33.77:0,34,416	0/0:10,0:10:23.58:0,24,232	0/0:7,0:7:18.32:0,18,208	0/0:15,0:15:45.15:0,45,749	0/0:15,0:15:38.66:0,39,496	0/0:13,0:13:16.65:0,17,168	0/0:20,0:20:52.94:0,53,622	0/0:17,0:17:14.63:0,15,173	0/0:22,0:22:47.68:0,48,674	0/0:17,0:17:37.77:0,38,513	0/0:13,0:13:36.85:0,37,317	0/0:10,0:10:23.84:0,24,298	0/0:16,0:16:48.15:0,48,778	0/0:16,0:15:39.13:0,39,638	0/0:23,0:23:66.21:0,66,1041	0/0:16,0:16:43.42:0,43,385	0/0:18,0:17:43.83:0,44,435	0/0:15,0:15:21.83:0,22,140	0/0:17,0:17:38.53:0,39,470
chr10	67085120	.	TTGTTTTTG	T	9939.07	PASS	AB=1.000;AC=43;AF=0.768;AN=56;BaseQRankSum=14.198;DP=471;FS=1.423;HRun=0;HaplotypeScore=151.1499;InbreedingCoeff=0.8926;MQ=60.25;MQ0=10;MQRankSum=-7.443;QD=28.40;ReadPosRankSum=-1.364;VQSLOD=4.4545;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,26:27:15.05:406,15,0	1/1:1,5:6:8.52:183,9,0	0/0:21,0:12:26.43:0,26,376	0/1:19,0:14:3.38:3,0,290	0/0:29,0:28:81.14:0,81,2552	1/1:14,0:14:36.09:749,36,0	1/1:5,0:5:14.61:200,15,0	1/1:32,0:31:28.90:390,29,0	1/1:14,0:14:39.31:569,39,0	1/1:21,0:21:55.55:683,56,0	1/1:10,0:10:30.04:396,30,0	1/1:7,0:7:18:289,18,0	0/0:16,0:16:45.15:0,45,1480	1/1:15,0:15:36.95:523,37,0	1/1:17,0:17:26.86:408,27,0	1/1:17,0:17:40.14:632,40,0	1/1:2,13:14:6.02:174,6,0	1/1:21,0:21:51.45:535,51,0	1/1:15,0:14:29.20:315,29,0	1/1:15,0:14:41.97:696,42,0	1/1:8,0:8:19.29:279,19,0	0/0:17,0:17:48.16:0,48,1480	0/0:17,0:16:43.38:0,43,1502	0/0:21,0:21:60.19:0,60,1880	1/1:19,0:19:54.02:860,54,0	1/1:19,0:18:50.93:716,51,0	1/1:17,0:17:23.59:496,24,0	1/1:17,0:17:32.78:434,33,0
chr10	67085121	.	TG	T	5172.17	PASS	AB=1.000;AC=41;AF=0.732;AN=56;BaseQRankSum=13.051;DP=467;FS=0.000;HRun=1;HaplotypeScore=112.1227;InbreedingCoeff=0.8453;MQ=60.34;MQ0=10;MQRankSum=-6.887;QD=15.72;ReadPosRankSum=-0.931;VQSLOD=4.4412;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:27:14.29:76,14,0	1/1:5,1:6:8.86:76,9,0	0/0:20,0:11:26.44:0,26,260	0/0:20,1:16:4.16:0,4,296	0/0:29,0:28:81.08:0,81,1020	1/1:1,13:14:35.86:303,36,0	1/1:2,3:5:14.34:107,14,0	0/1:32,0:31:35.81:36,0,133	1/1:6,8:14:34.18:309,34,0	1/1:13,8:21:53.57:456,54,0	1/1:3,7:10:29.53:237,30,0	1/1:4,3:7:16.97:132,17,0	0/0:15,0:15:45.14:0,45,611	1/1:9,6:15:37.37:296,37,0	1/1:2,15:17:26.65:233,27,0	1/1:8,7:15:41.48:339,41,0	1/1:14,0:13:5.85:34,6,0	1/1:19,3:22:54.11:396,54,0	1/1:10,5:14:29.62:266,30,0	1/1:7,8:14:38.92:325,39,0	1/1:6,2:8:20.94:170,21,0	0/0:16,0:16:48.16:0,48,666	0/0:16,0:15:42.14:0,42,583	0/0:21,0:21:60.17:0,60,801	1/1:5,14:19:55.99:493,56,0	1/1:2,17:18:47.62:401,48,0	1/1:1,16:17:23.75:221,24,0	1/1:10,7:17:33.69:265,34,0
chr10	67085125	.	TTTGTTTTTG	T	9386.14	PASS	AB=1.000;AC=39;AF=0.696;AN=56;BaseQRankSum=11.650;DP=466;FS=0.858;HRun=0;HaplotypeScore=160.5756;InbreedingCoeff=0.8762;MQ=58.10;MQ0=10;MQRankSum=-7.568;QD=31.71;ReadPosRankSum=-0.588;VQSLOD=4.5849;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:27:13.17:93,13,0	0/1:6,0:6:26.93:38,0,27	0/0:20,0:10:18.06:0,18,399	0/0:20,0:15:7.80:0,8,463	0/0:27,0:26:69.23:0,69,2676	1/1:5,6:13:33.11:761,33,0	1/1:3,1:5:14.70:207,15,0	0/0:33,0:32:73.96:0,74,974	1/1:7,5:13:37.12:549,37,0	1/1:17,0:20:52.93:715,53,0	1/1:4,3:11:33.06:438,33,0	1/1:6,1:7:18.06:334,18,0	0/0:15,0:15:45.15:0,45,1637	1/1:12,1:15:36.08:539,36,0	1/1:14,1:17:29.94:451,30,0	1/1:8,6:15:39.07:660,39,0	1/1:14,0:13:5.98:46,6,0	1/1:24,0:24:58.68:658,59,0	1/1:11,1:14:28.84:322,29,0	1/1:10,5:15:44.06:726,44,0	1/1:6,1:8:18.04:283,18,0	0/0:17,0:17:51.07:0,51,1622	0/0:16,0:15:45.02:0,45,1668	0/0:22,0:22:63.18:0,63,2075	1/1:7,8:19:54.07:882,54,0	1/1:11,5:16:41.94:686,42,0	1/1:12,5:17:27.02:539,27,0	1/1:11,3:17:34.97:458,35,0
chr10	67085127	.	TG	T	4186.05	PASS	AB=0.985;AC=39;AF=0.696;AN=56;BaseQRankSum=12.314;DP=457;FS=7.333;HRun=1;HaplotypeScore=114.5532;InbreedingCoeff=0.7639;MQ=58.52;MQ0=10;MQRankSum=-8.288;QD=13.64;ReadPosRankSum=-0.361;VQSLOD=2.2994;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:27:14.14:74,14,0	0/1:6,0:6:1.09:16,0,1	0/0:18,0:10:17.46:0,17,227	0/1:20,1:16:9.88:10,0,339	0/0:28,0:27:78.19:0,78,1006	1/1:13,0:13:31.31:178,31,0	1/1:4,1:5:4.43:80,4,0	0/0:32,0:31:20.55:0,21,585	1/1:13,0:13:27.81:232,28,0	1/1:19,1:20:43.93:383,44,0	1/1:10,1:11:32.42:239,32,0	1/1:5,1:7:17.54:116,18,0	0/0:16,0:16:48.14:0,48,651	1/1:11,2:13:34.03:256,34,0	1/1:14,3:18:31.96:256,32,0	1/1:13,0:13:35.89:233,36,0	1/1:13,1:13:5.49:24,5,0	1/1:21,2:23:56.82:404,57,0	0/1:13,0:12:4.54:220,0,5	1/1:15,2:16:43.52:268,44,0	1/1:6,0:6:17.61:120,18,0	0/0:17,0:17:51.04:0,51,664	0/0:16,0:15:42.08:0,42,565	0/0:23,0:23:66.10:0,66,825	1/1:19,0:19:51.02:399,51,0	1/1:14,2:15:34.73:264,35,0	1/1:16,0:16:25.78:165,26,0	1/1:15,1:16:36.59:248,37,0
chr10	67085131	.	TTTG	T	3607.05	PASS	AB=0.929;AC=32;AF=0.571;AN=56;BaseQRankSum=10.456;DP=450;FS=3.694;HRun=0;HaplotypeScore=125.7479;InbreedingCoeff=0.7593;MQ=58.70;MQ0=10;MQRankSum=-5.378;QD=15.55;ReadPosRankSum=1.180;VQSLOD=3.0645;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:7.34:0,7,26	0/0:7,0:7:7.79:0,8,86	0/0:16,0:9:18.02:0,18,293	0/0:18,0:15:34.86:0,35,405	0/0:30,0:29:84.27:0,84,1522	1/1:12,0:12:28.16:259,28,0	0/1:5,1:6:14.76:66,0,15	0/0:30,0:29:80.22:0,80,890	1/1:13,0:13:21.80:218,22,0	1/1:18,1:19:5.92:228,6,0	1/1:11,1:12:30.34:227,30,0	1/1:7,0:7:17.58:136,18,0	0/0:17,0:17:51.17:0,51,962	1/1:10,1:11:18.89:180,19,0	1/1:14,2:16:19.72:213,20,0	1/1:13,0:13:28.63:259,29,0	0/0:14,0:13:1.77:0,2,4	1/1:21,1:22:46.27:301,46,0	0/1:13,0:12:3.96:138,0,4	1/1:18,2:19:29.64:297,30,0	1/1:6,0:6:4.98:74,5,0	0/0:16,0:16:42.14:0,42,837	0/0:19,0:18:50.95:0,51,919	0/0:23,0:23:63.21:0,63,1146	1/1:20,0:20:10.17:320,10,0	1/1:14,0:13:35.42:313,35,0	1/1:14,0:14:26.16:236,26,0	1/1:13,1:14:1.95:141,2,0
chr10	67085132	.	TTG	T	3496.22	PASS	AB=1.000;AC=31;AF=0.554;AN=56;BaseQRankSum=9.867;DP=450;FS=2.995;HRun=0;HaplotypeScore=118.6037;InbreedingCoeff=0.6684;MQ=58.78;MQ0=9;MQRankSum=-5.649;QD=13.34;ReadPosRankSum=0.864;VQSLOD=3.6783;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:27:0.18:0,0,50	0/0:6,0:6:10.44:0,10,86	0/0:14,0:9:17.52:0,18,292	0/0:20,0:15:34.05:0,34,484	0/0:30,0:29:84.22:0,84,1332	1/1:12,0:12:20.20:215,20,0	0/1:7,0:7:18.18:80,0,18	0/0:30,0:29:80.63:0,81,960	1/1:13,0:13:18.53:195,19,0	0/1:20,0:20:7.56:203,0,8	1/1:12,0:12:29.90:207,30,0	1/1:6,1:7:17:126,17,0	0/0:17,0:17:51.17:0,51,867	1/1:11,0:11:19.49:156,19,0	1/1:15,1:16:27.25:221,27,0	1/1:14,0:14:36.42:290,36,0	0/0:14,0:13:4.44:0,4,15	1/1:20,1:22:45.58:318,46,0	0/1:13,0:12:10.87:138,0,11	1/1:20,0:19:26.09:288,26,0	1/1:6,0:6:2.91:84,3,0	0/0:16,0:16:42.13:0,42,722	0/0:18,0:17:50.68:0,51,757	0/0:23,0:23:63.19:0,63,1053	1/1:20,0:20:18.15:325,18,0	1/1:13,1:13:35.35:278,35,0	1/1:14,0:14:26.21:220,26,0	0/1:14,0:14:0.62:151,0,1
chr10	67085333	.	TGCGCGC	T	1356.11	PASS	AB=0.961;AC=22;AF=0.393;AN=56;BaseQRankSum=5.764;DP=461;FS=11.283;HRun=0;HaplotypeScore=158.6596;InbreedingCoeff=0.0270;MQ=47.15;MQ0=5;MQRankSum=-3.864;QD=5.18;ReadPosRankSum=-2.683;VQSLOD=1.4586;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:42.14:0,42,802	0/0:9,0:9:9.49:0,9,149	0/0:20,0:12:1.18:0,1,542	0/0:26,0:20:39.74:0,40,1050	0/0:16,0:16:48.15:0,48,1393	1/1:8,2:8:8.97:73,9,0	0/1:25,1:25:39.25:39,0,48	0/1:14,1:13:22.83:197,0,23	0/1:12,0:12:5.49:5,0,85	0/1:9,3:12:97.67:252,0,98	0/1:8,0:8:0:0,0,0	0/1:19,0:18:51.53:52,0,157	0/0:20,0:20:60.20:0,60,1806	1/1:14,2:15:8.34:142,8,0	0/0:6,0:5:0.44:0,0,1	1/1:5,0:5:0.89:2,1,0	0/0:22,0:22:57.07:0,57,1010	0/1:23,0:21:84.82:85,0,369	0/1:9,0:9:65.32:65,0,77	1/1:7,1:8:6.02:88,6,0	0/1:36,0:32:16.05:16,0,47	0/0:12,0:12:33.11:0,33,1050	0/0:13,0:13:39.12:0,39,1193	0/0:34,0:34:99:0,102,3379	1/1:25,0:24:6.08:94,6,0	0/1:20,1:20:99:194,0,239	0/1:8,0:8:65.52:173,0,66	0/1:7,0:7:40.99:41,0,97
chr10	67085351	.	CGTGT	C	2745.11	PASS	AB=0.619;AC=21;AF=0.389;AN=54;BaseQRankSum=6.772;DP=516;FS=5.222;HRun=0;HaplotypeScore=148.1049;InbreedingCoeff=0.2940;MQ=54.26;MQ0=6;MQRankSum=-5.260;QD=10.28;ReadPosRankSum=-1.170;VQSLOD=2.9322;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:10,10:20:12.26:116,12,0	1/1:2,5:7:5.97:72,6,0	0/0:22,0:13:36.12:0,36,818	0/0:22,0:17:37.94:0,38,736	0/0:16,0:16:42.14:0,42,998	0/0:6,4:8:5.88:0,6,95	0/1:9,27:35:44.90:62,0,45	1/1:13,1:12:20.29:162,20,0	0/1:3,11:14:35.46:98,0,35	1/1:5,11:16:29.11:470,29,0	0/0:6,4:9:0:0,0,0	0/1:6,21:27:75.66:147,0,76	0/0:21,0:21:38.20:0,38,1340	0/0:8,14:21:0.89:0,1,2	0/0:3,9:11:0.47:0,0,2	0/0:3,7:10:2.37:0,2,8	0/1:17,9:26:12.51:493,0,13	0/1:13,11:23:99:336,0,289	0/1:2,4:6:4:116,0,4	./.	1/1:12,31:41:3.95:56,4,0	0/0:10,0:10:27.09:0,27,701	0/0:16,0:16:48.16:0,48,1104	0/0:40,0:40:99:0,117,2816	0/0:12,14:25:2.80:0,3,46	0/1:8,14:21:84.67:516,0,85	1/1:1,6:7:9.03:161,9,0	1/1:1,4:5:6.02:108,6,0
chr10	67085355	.	T	TGC	1232.98	PASS	AB=0.969;AC=26;AF=0.481;AN=54;BaseQRankSum=6.776;DP=514;FS=6.527;HRun=0;HaplotypeScore=147.3220;InbreedingCoeff=0.1966;MQ=55.21;MQ0=6;MQRankSum=-5.278;QD=3.82;ReadPosRankSum=-1.291;VQSLOD=2.3651;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:18,1:19:4.17:4,0,44	0/0:7,0:7:2.16:0,2,9	0/0:22,0:13:36.12:0,36,551	0/0:22,0:17:43.75:0,44,585	0/0:16,0:16:42.12:0,42,599	1/1:10,0:8:3.85:22,4,0	0/1:36,0:35:9.19:29,0,9	0/1:11,3:12:34.97:232,0,35	0/1:14,0:14:5.13:24,0,5	1/1:16,0:16:23.38:289,23,0	0/1:10,0:9:0.01:0,0,0	0/1:27,0:27:2.21:69,0,2	0/0:20,0:20:38.18:0,38,784	1/1:22,0:21:0.79:1,1,0	1/1:12,0:11:0.47:2,0,0	1/1:10,0:10:2.60:10,3,0	0/1:24,0:24:56.69:57,0,159	0/1:24,0:23:71.95:72,0,104	0/1:6,0:6:4.04:116,0,4	./.	1/1:44,0:42:2.62:19,3,0	0/0:10,0:10:30.09:0,30,438	0/0:17,0:17:48.16:0,48,719	0/0:39,0:39:99:0,117,1736	0/0:26,0:25:2.15:0,2,10	0/1:20,2:21:38.52:346,0,39	1/1:8,0:8:8.46:62,8,0	1/1:5,0:5:5.88:36,6,0
chr10	67085358	.	G	GCC	534.23	PASS	AB=0.846;AC=9;AF=0.167;AN=54;BaseQRankSum=5.674;DP=483;FS=9.888;HRun=0;HaplotypeScore=141.0794;InbreedingCoeff=0.4236;MQ=56.71;MQ0=4;MQRankSum=-6.246;QD=7.74;ReadPosRankSum=-0.608;VQSLOD=2.7961;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:18,2:20:11.89:172,12,0	1/1:5,1:6:5.38:65,5,0	0/0:23,0:14:39.13:0,39,618	0/0:18,0:14:42.13:0,42,634	0/0:14,0:14:42.14:0,42,679	0/0:8,0:6:2.08:0,2,15	0/0:38,0:37:11.73:0,12,108	0/1:6,3:9:6.23:164,0,6	0/0:14,0:14:10.69:0,11,106	0/0:13,0:13:23.36:0,23,159	0/1:8,0:7:0:0,0,0	0/0:25,0:25:12.73:0,13,81	0/0:20,0:20:57.19:0,57,912	0/0:21,0:20:2.31:0,2,44	1/1:11,0:11:0.94:2,1,0	0/0:10,0:10:2.22:0,2,7	0/1:11,4:15:16.76:252,0,17	0/0:21,0:20:39.22:0,39,290	0/0:6,0:6:15.34:0,15,146	./.	0/0:42,0:40:5.28:0,5,56	0/0:9,0:9:27.09:0,27,441	0/0:18,0:18:51.17:0,51,827	0/0:40,0:40:99:0,120,1944	0/0:26,0:25:2.37:0,2,28	0/0:22,0:21:37.60:0,38,329	0/0:9,0:9:17.62:0,18,166	0/0:5,0:5:5.75:0,6,29
chr10	67085364	.	CCGAGTG	C	1420.04	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=6.429;DP=473;FS=9.210;HRun=0;HaplotypeScore=145.8869;InbreedingCoeff=0.8631;MQ=65.16;MQ0=2;MQRankSum=-8.538;QD=30.87;ReadPosRankSum=-1.446;VQSLOD=2.6353;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,15:18:26.63:253,27,0	1/1:1,5:6:14.99:193,15,0	0/0:24,0:18:48.15:0,48,1215	0/0:18,0:15:42:0,42,1048	0/0:14,0:14:39.12:0,39,1213	0/0:7,0:7:0.15:0,0,94	0/0:32,0:32:26.92:0,27,742	1/1:3,5:8:23.96:366,24,0	0/0:14,0:14:17.68:0,18,582	0/0:12,0:12:36.12:0,36,892	0/0:6,0:6:6.02:0,6,193	0/0:24,0:24:22.88:0,23,657	0/0:21,0:21:63.20:0,63,1976	0/0:19,0:19:17.18:0,17,591	0/0:16,0:16:15.05:0,15,484	0/0:10,0:11:10.05:0,10,259	1/1:6,8:14:39.13:765,39,0	0/0:15,0:16:33.08:0,33,720	0/0:6,0:6:15.05:0,15,444	0/0:8,0:8:15.05:0,15,453	0/0:42,0:41:17.61:0,18,616	0/0:9,0:9:27.09:0,27,864	0/0:18,0:18:51.18:0,51,1745	0/0:39,0:39:99:0,117,3713	0/0:26,0:25:12.82:0,13,486	0/0:22,0:21:53.97:0,54,1632	0/0:13,0:13:33.11:0,33,1052	0/0:9,0:9:21.07:0,21,649
chr10	67087695	.	C	CT	1038.42	PASS	AB=0.867;AC=30;AF=0.536;AN=56;BaseQRankSum=-2.534;DP=419;FS=2.134;HRun=16;HaplotypeScore=83.7683;InbreedingCoeff=0.2211;MQ=63.75;MQ0=11;MQRankSum=-3.592;QD=3.51;ReadPosRankSum=-4.585;VQSLOD=-0.5665;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:23:26.85:0,27,75	0/0:4,0:7:6.09:0,6,17	0/0:23,0:13:10.37:0,10,54	0/0:13,0:9:2.77:0,3,15	0/1:17,0:17:2.15:2,0,64	0/1:7,7:14:4.99:45,0,5	0/1:6,6:13:18.71:47,0,19	1/1:16,7:19:18.81:140,19,0	1/1:11,3:13:10.34:75,10,0	1/1:6,0:14:17.96:106,18,0	1/1:8,10:20:3:76,3,0	0/1:13,0:13:2.85:62,0,3	0/1:19,0:16:6.19:6,0,42	0/0:8,0:8:4.37:0,4,31	1/1:7,5:11:2.94:19,3,0	0/1:9,0:9:7.82:34,0,8	0/0:6,0:14:15.60:0,16,45	0/1:8,4:11:9.86:15,0,10	0/1:11,4:14:13.76:74,0,14	1/1:15,3:19:12.12:153,12,0	1/1:3,0:3:0.47:1,0,0	0/0:8,0:8:8.36:0,8,43	0/1:9,0:10:8.32:8,0,47	0/0:22,0:23:24.66:0,25,138	0/1:12,3:15:10.30:20,0,10	1/1:14,9:22:5:118,5,0	1/1:13,4:18:21.94:147,22,0	1/1:9,0:9:8.86:63,9,0
chr10	67088359	.	GTAGC	G	2735.47	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=1.884;DP=624;FS=15.818;HRun=0;HaplotypeScore=188.7290;InbreedingCoeff=0.9832;MQ=84.64;MQ0=3;MQRankSum=-6.852;QD=39.08;ReadPosRankSum=2.546;VQSLOD=2.9435;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,32:33:78.27:1414,78,0	1/1:0,5:5:9.03:163,9,0	0/0:22,0:22:51.16:0,51,1127	0/0:28,0:29:65.73:0,66,1348	0/0:30,0:30:68.75:0,69,1730	0/0:16,0:16:36.12:0,36,895	0/0:28,0:28:78.27:0,78,1985	1/1:5,13:18:42.10:736,42,0	0/0:20,0:19:48.13:0,48,1153	0/0:14,0:14:36.12:0,36,901	0/0:14,0:14:39.13:0,39,979	0/0:25,0:25:66.23:0,66,1723	0/0:35,0:35:93.30:0,93,2317	0/0:30,0:30:84.29:0,84,2201	0/0:32,0:32:75.26:0,75,1936	0/0:25,0:24:66.23:0,66,1692	1/1:3,11:14:33.11:579,33,0	0/0:15,0:15:42.14:0,42,1093	0/0:19,0:19:51.17:0,51,1264	0/0:32,0:32:87.27:0,87,2140	0/0:24,0:24:60.16:0,60,1449	0/0:17,0:17:36.06:0,36,867	0/0:10,0:10:30.09:0,30,670	0/0:23,0:22:60.21:0,60,1583	0/0:18,0:18:51.18:0,51,1256	0/0:29,0:29:78.27:0,78,1997	0/0:19,0:19:57.20:0,57,1438	0/0:28,0:27:69.24:0,69,1802
chr10	67088398	.	G	GGA	21752.96	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=-0.798;DP=534;FS=1.263;HRun=0;HaplotypeScore=216.7956;InbreedingCoeff=0.9969;MQ=74.40;MQ0=3;MQRankSum=-7.474;QD=54.93;ReadPosRankSum=2.238;VQSLOD=4.4598;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,13:18:51.09:792,51,0	1/1:0,6:7:21.07:423,21,0	0/0:22,0:22:57.50:0,57,866	0/0:23,0:23:66.17:0,66,929	0/0:24,0:24:69.22:0,69,1097	1/1:1,14:15:45.15:887,45,0	1/1:3,14:17:45.15:899,45,0	1/1:4,27:31:93.32:1816,93,0	1/1:1,17:17:51.18:1031,51,0	1/1:3,16:19:51.17:1020,51,0	1/1:1,12:13:33.11:669,33,0	1/1:3,21:24:66.18:1291,66,0	0/0:25,0:25:72.25:0,72,1168	1/1:0,23:24:69.24:1398,69,0	1/1:0,22:22:66.23:1335,66,0	1/1:3,23:25:75.26:1472,75,0	1/1:0,12:12:36.12:726,36,0	1/1:0,8:8:21.07:426,21,0	1/1:3,18:21:60.21:1170,60,0	1/1:2,24:26:69.24:1392,69,0	1/1:2,15:17:36.08:688,36,0	0/0:19,0:19:54.16:0,54,874	0/0:9,0:9:18.06:0,18,288	0/0:16,0:15:33.11:0,33,530	1/1:1,14:16:42.14:850,42,0	1/1:2,22:24:69.24:1377,69,0	1/1:2,21:23:66.22:1298,66,0	1/1:3,12:14:39.13:790,39,0
chr10	67089122	.	CTG	C	6387.79	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=9.096;DP=484;FS=0.496;HRun=0;HaplotypeScore=131.9541;InbreedingCoeff=0.9387;MQ=58.57;MQ0=8;MQRankSum=-7.741;QD=18.57;ReadPosRankSum=2.946;VQSLOD=5.2431;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,24:34:9.02:95,9,0	1/1:3,2:5:12.03:137,12,0	0/0:25,0:17:23.14:0,23,390	0/0:22,0:11:24.05:0,24,347	0/0:19,0:18:30.07:0,30,436	1/1:5,11:16:27.08:328,27,0	1/1:4,6:10:12.04:148,12,0	1/1:15,5:15:23.51:206,24,0	1/1:6,7:13:32.99:359,33,0	1/1:12,15:27:75:851,75,0	1/1:7,3:10:12.04:145,12,0	1/1:7,7:14:27.07:320,27,0	0/0:9,0:9:21.05:0,21,322	1/1:7,7:14:18.06:218,18,0	1/1:5,9:14:29.85:329,30,0	1/1:3,5:8:15.03:172,15,0	1/1:11,17:28:53.88:588,54,0	1/1:11,10:21:27.01:506,27,0	1/1:8,16:23:14.23:488,14,0	1/1:3,6:9:8.86:88,9,0	1/1:14,7:20:8.82:105,9,0	0/0:19,0:19:48.15:0,48,746	0/0:18,0:18:36.12:0,36,598	0/0:28,0:28:63.17:0,63,961	1/1:4,8:12:21.07:260,21,0	1/1:12,13:25:46.76:630,47,0	1/1:3,8:11:21.04:241,21,0	1/1:4,3:7:17.99:173,18,0
chr10	67089133	.	TGTGC	T	4118.74	PASS	AB=1.000;AC=41;AF=0.732;AN=56;BaseQRankSum=12.965;DP=481;FS=0.000;HRun=0;HaplotypeScore=163.1800;InbreedingCoeff=0.8201;MQ=52.27;MQ0=10;MQRankSum=-8.887;QD=12.04;ReadPosRankSum=2.123;VQSLOD=3.2243;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:26:9.02:89,9,0	1/1:6,0:6:14.73:114,15,0	0/0:23,0:13:26.64:0,27,379	0/0:23,0:11:19.92:0,20,402	0/0:18,0:17:32.91:0,33,545	1/1:16,0:16:29.45:225,29,0	1/1:11,1:12:14.42:87,14,0	1/1:24,0:16:23.22:140,23,0	1/1:14,1:15:18.07:237,18,0	1/1:27,0:27:71.68:581,72,0	1/1:10,2:12:22.98:165,23,0	1/1:15,0:15:6.98:164,7,0	0/0:9,0:9:26.99:0,27,586	1/1:10,0:10:6.23:153,6,0	1/1:14,0:14:28.81:180,29,0	1/1:8,0:8:4.85:89,5,0	1/1:31,0:31:50.21:368,50,0	1/1:21,1:22:25.34:312,25,0	0/1:20,0:18:34.72:154,0,35	1/1:7,1:8:11.91:105,12,0	1/1:16,1:16:11.74:75,12,0	0/0:19,0:19:51.14:0,51,1173	0/0:16,0:16:42.10:0,42,982	0/0:31,0:31:81.18:0,81,1651	1/1:11,2:13:15.03:211,15,0	1/1:26,0:25:38.16:396,38,0	1/1:11,0:11:20.88:190,21,0	1/1:8,0:8:11.46:86,11,0
chr10	67089137	.	CGTGTGTGCGT	C	7005.57	PASS	AB=1.000;AC=41;AF=0.732;AN=56;BaseQRankSum=10.997;DP=481;FS=2.450;HRun=0;HaplotypeScore=194.8391;InbreedingCoeff=0.7913;MQ=49.57;MQ0=15;MQRankSum=-7.418;QD=20.31;ReadPosRankSum=0.293;VQSLOD=3.7596;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,8:26:9.03:268,9,0	1/1:7,2:9:12.04:313,12,0	0/0:20,0:10:8.17:0,8,101	0/0:20,0:9:3.79:0,4,311	0/0:18,0:17:26.68:0,27,596	1/1:12,4:16:29.91:385,30,0	1/1:10,1:11:15.02:174,15,0	1/1:23,0:15:25.58:184,26,0	1/1:14,1:15:32.44:401,32,0	1/1:22,5:27:76.48:1096,76,0	1/1:14,0:14:17.53:191,18,0	1/1:12,1:13:14.15:178,14,0	0/0:9,0:9:27.09:0,27,1129	1/1:9,1:10:15.04:172,15,0	1/1:15,0:15:30.05:440,30,0	1/1:7,1:7:12.03:132,12,0	1/1:23,7:32:46.77:831,47,0	0/1:22,0:22:20.84:457,0,21	1/1:23,0:18:3.21:292,3,0	1/1:9,0:9:12.03:129,12,0	1/1:16,1:15:12.04:158,12,0	0/0:21,0:21:51.17:0,51,2192	0/0:17,0:17:45.12:0,45,1647	0/0:29,0:29:72.13:0,72,2821	1/1:13,1:14:26.11:287,26,0	1/1:22,1:22:51.45:589,51,0	1/1:12,0:12:22.26:239,22,0	1/1:5,0:5:8.86:89,9,0
chr10	67089139	.	TGTGTGC	T	8688.77	PASS	AB=0.923;AC=42;AF=0.750;AN=56;BaseQRankSum=11.699;DP=481;FS=2.392;HRun=0;HaplotypeScore=164.5806;InbreedingCoeff=0.8294;MQ=48.64;MQ0=14;MQRankSum=-7.352;QD=23.48;ReadPosRankSum=-1.296;VQSLOD=4.6279;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:22:9.03:129,9,0	1/1:9,0:9:11.87:148,12,0	0/0:18,0:8:7.91:0,8,101	0/1:21,0:8:3.07:3,0,180	0/0:19,0:18:25.87:0,26,299	1/1:13,4:17:33.06:506,33,0	1/1:12,0:12:15:158,15,0	1/1:9,14:15:34.86:425,35,0	1/1:11,5:16:35.39:549,35,0	1/1:16,10:26:78.04:1184,78,0	1/1:12,2:14:21.01:326,21,0	1/1:10,6:16:26.41:417,26,0	0/0:10,0:10:30.10:0,30,823	1/1:6,5:11:18.06:369,18,0	1/1:10,6:16:33.05:499,33,0	1/1:5,4:8:14.98:254,15,0	1/1:30,0:30:44.86:477,45,0	0/1:18,4:22:0.78:517,0,1	1/1:20,2:18:12.99:408,13,0	1/1:6,3:9:12.04:260,12,0	1/1:17,2:17:17.93:207,18,0	0/0:19,0:19:51.17:0,51,1523	0/0:17,0:17:45.12:0,45,1131	0/0:28,0:28:72.13:0,72,1995	1/1:10,5:15:27.08:514,27,0	1/1:16,7:22:53.52:746,54,0	1/1:6,6:12:24.02:409,24,0	1/1:4,1:5:11.99:182,12,0
chr10	67089143	.	TGC	T	3740.66	PASS	AB=1.000;AC=43;AF=0.768;AN=56;BaseQRankSum=11.006;DP=478;FS=2.323;HRun=0;HaplotypeScore=155.4385;InbreedingCoeff=0.5772;MQ=48.84;MQ0=14;MQRankSum=-6.734;QD=9.69;ReadPosRankSum=1.067;VQSLOD=3.2756;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:22:14.20:73,14,0	1/1:9,0:9:11.48:68,11,0	0/0:15,0:6:8.17:0,8,101	0/1:23,0:10:6.93:7,0,92	0/1:19,0:18:14.26:57,0,14	1/1:16,1:17:18.60:211,19,0	1/1:12,1:13:14.67:112,15,0	1/1:22,1:15:31.59:231,32,0	1/1:13,1:14:13.40:166,13,0	1/1:26,0:26:60.30:556,60,0	1/1:15,0:15:9.28:116,9,0	0/1:14,0:14:4.60:129,0,5	0/0:10,0:10:30.09:0,30,527	1/1:12,0:12:3.50:98,4,0	1/1:17,0:17:17.57:215,18,0	1/1:8,0:7:0.45:69,0,0	1/1:30,0:30:43.67:297,44,0	1/1:21,0:21:11:215,11,0	1/1:21,0:17:4.04:193,4,0	1/1:8,0:8:11.59:74,12,0	1/1:18,0:16:5.68:64,6,0	0/0:21,0:21:57.11:0,57,969	0/0:19,0:19:39.20:0,39,704	0/0:26,0:26:60.39:0,60,1182	1/1:9,6:15:25.63:164,26,0	1/1:20,0:19:50.68:390,51,0	1/1:15,0:15:23.76:175,24,0	1/1:4,1:5:7.22:60,7,0
chr10	67089145	.	CGT	C	1573.40	PASS	AB=0.990;AC=39;AF=0.696;AN=56;BaseQRankSum=10.280;DP=472;FS=17.919;HRun=0;HaplotypeScore=161.2717;InbreedingCoeff=0.5214;MQ=48.99;MQ0=13;MQRankSum=-7.772;QD=4.42;ReadPosRankSum=2.600;VQSLOD=1.6905;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:22:5.91:149,0,6	1/1:4,5:9:9.02:99,9,0	0/0:16,0:6:2.96:0,3,19	0/0:24,0:11:8.99:0,9,96	1/1:3,15:18:20.90:232,21,0	1/1:16,0:16:13.48:56,13,0	0/1:14,0:14:1.93:2,0,17	0/1:22,0:14:9.42:9,0,25	1/1:13,0:13:10.44:66,10,0	1/1:24,1:25:46.84:283,47,0	1/1:15,0:15:11.22:42,11,0	1/1:15,0:15:13.94:61,14,0	0/0:10,0:10:27.09:0,27,433	1/1:13,0:13:15.81:67,16,0	1/1:16,0:16:12.47:51,12,0	1/1:7,1:7:13.29:64,13,0	1/1:20,10:30:5.60:137,6,0	0/1:18,1:19:22.67:114,0,23	1/1:19,1:16:7.35:48,7,0	1/1:6,0:6:10.36:42,10,0	0/1:20,0:18:1.42:1,0,22	0/0:21,0:21:54.18:0,54,855	0/0:18,1:19:5.72:0,6,541	0/0:24,2:26:26.80:0,27,897	1/1:15,0:15:20.36:83,20,0	1/1:19,0:19:16.99:82,17,0	1/1:15,0:15:12.35:55,12,0	1/1:5,0:5:1.75:11,2,0
chr10	67089161	.	T	TGC	4480.34	PASS	AB=1.000;AC=36;AF=0.643;AN=56;BaseQRankSum=8.801;DP=474;FS=4.736;HRun=0;HaplotypeScore=141.0301;InbreedingCoeff=0.7995;MQ=50.50;MQ0=10;MQRankSum=-6.098;QD=14.98;ReadPosRankSum=-0.709;VQSLOD=4.2778;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:32.58:0,33,227	0/0:8,0:8:8.81:0,9,55	0/1:12,0:4:0.38:0,0,16	0/0:15,0:5:4.33:0,4,115	0/0:21,0:20:35.17:0,35,230	1/1:9,9:18:18.04:224,18,0	1/1:5,9:17:6.01:82,6,0	0/1:15,0:10:26.90:78,0,27	1/1:9,4:14:10.03:237,10,0	1/1:17,7:24:52.31:515,52,0	1/1:5,12:18:21.04:334,21,0	1/1:8,7:15:20.86:261,21,0	0/0:11,0:11:30.09:0,30,435	1/1:6,5:11:17.96:186,18,0	1/1:8,2:10:14.71:209,15,0	1/1:7,4:10:14.99:163,15,0	0/0:27,0:27:17.41:0,17,142	1/1:20,2:22:13.44:376,13,0	1/1:18,2:17:12.99:312,13,0	1/1:6,1:7:15.02:186,15,0	1/1:11,18:28:12.39:182,12,0	0/0:22,0:22:57.18:0,57,836	0/0:20,0:20:47.98:0,48,633	0/0:27,0:27:72.01:0,72,968	1/1:15,2:17:36.03:414,36,0	1/1:9,4:13:33.75:354,34,0	1/1:9,9:18:19.58:225,20,0	1/1:4,3:7:9.03:139,9,0
chr10	67090572	.	G	GT	659.11	PASS	AB=0.938;AC=10;AF=0.179;AN=56;BaseQRankSum=7.730;DP=458;FS=18.480;HRun=8;HaplotypeScore=56.3361;InbreedingCoeff=0.5547;MQ=68.59;MQ0=10;MQRankSum=0.740;QD=3.81;ReadPosRankSum=-0.258;VQSLOD=-0.4122;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,15:20:15.68:286,16,0	1/1:1,4:5:10.58:106,11,0	0/1:53,0:23:46.14:46,0,158	0/1:47,0:20:0.43:0,0,77	0/0:21,0:21:54:0,54,486	0/1:10,2:12:4.58:5,0,213	0/0:6,0:6:14.99:0,15,131	0/0:29,0:29:14.36:0,14,168	0/0:11,0:11:32.99:0,33,293	0/0:19,0:19:42.01:0,42,384	0/0:17,0:17:41.99:0,42,378	0/0:9,0:9:24.01:0,24,219	0/0:3,0:3:9:0,9,82	0/0:6,0:6:12:0,12,110	0/0:9,0:9:20.99:0,21,185	0/0:10,0:10:26.99:0,27,243	1/1:11,11:20:16.36:358,16,0	0/0:25,0:25:62.68:0,63,567	0/1:10,1:11:1.61:2,0,239	0/0:16,0:16:45.02:0,45,412	0/0:11,0:11:16.23:0,16,136	0/0:6,0:6:15.01:0,15,137	0/0:10,0:10:23.94:0,24,206	0/0:5,0:5:9:0,9,82	0/0:22,0:22:63.03:0,63,576	0/0:18,0:18:32.96:0,33,287	0/0:14,0:14:41.99:0,42,374	0/0:18,0:18:51:0,51,461
chr10	67091580	.	T	TTTTG	203.25	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-3.136;DP=528;FS=12.691;HRun=0;HaplotypeScore=106.3824;InbreedingCoeff=0.7121;MQ=69.17;MQ0=7;MQRankSum=1.440;QD=9.24;ReadPosRankSum=-3.692;VQSLOD=0.5717;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:31:28.97:0,29,668	0/0:14,0:14:30.07:0,30,451	0/0:32,0:21:18.06:0,18,270	0/0:28,0:18:21.06:0,21,309	0/0:28,0:28:60.46:0,60,777	0/0:22,0:22:42.11:0,42,635	0/0:11,0:10:18.04:0,18,244	1/1:14,5:21:3.24:281,3,0	0/0:13,0:13:29.98:0,30,397	0/0:13,0:13:24.07:0,24,361	0/0:20,0:20:45.06:0,45,620	0/0:14,0:14:33.04:0,33,473	0/0:8,0:8:18.05:0,18,266	0/0:18,0:17:42.09:0,42,623	0/0:24,0:24:50.94:0,51,731	0/0:20,0:20:23.97:0,24,331	0/0:28,0:28:51.16:0,51,789	0/0:17,0:16:30.05:0,30,429	0/0:23,0:20:9.99:0,10,300	0/0:19,0:18:35.87:0,36,412	0/0:14,0:14:27.03:0,27,408	0/0:14,0:14:27.04:0,27,383	0/0:18,0:18:33.07:0,33,439	0/0:25,0:25:47.77:0,48,696	0/0:10,0:10:21.03:0,21,308	0/0:21,0:21:44.90:0,45,637	0/0:15,0:15:36.10:0,36,531	0/0:5,0:5:14.99:0,15,186
chr10	67091611	.	GGTGTGTGTGT	G	3547.16	PASS	AB=0.829;AC=36;AF=0.750;AN=48;BaseQRankSum=3.539;DP=545;FS=23.191;HRun=0;HaplotypeScore=143.9976;InbreedingCoeff=0.4632;MQ=49.45;MQ0=18;MQRankSum=-4.135;QD=10.46;ReadPosRankSum=0.465;VQSLOD=0.8595;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:22,4:26:3:86,3,0	1/1:8,2:10:6.02:176,6,0	./.	./.	1/1:23,0:26:12.04:213,12,0	1/1:16,4:20:6.02:176,6,0	1/1:10,0:9:3:25,3,0	./.	1/1:18,0:20:8.55:112,9,0	1/1:10,1:9:3.01:88,3,0	1/1:20,4:25:12:266,12,0	1/1:10,2:12:6.02:155,6,0	0/0:11,0:10:9.50:0,10,194	./.	0/1:19,3:22:23.82:251,0,24	1/1:13,3:15:14.11:400,14,0	1/1:25,3:25:6.02:173,6,0	0/0:16,0:15:5.12:0,5,28	1/1:13,2:14:2.84:88,3,0	1/1:15,7:21:10.06:350,10,0	1/1:15,0:14:5.92:44,6,0	0/0:16,0:17:21.06:0,21,387	0/0:16,0:17:20.64:0,21,401	0/0:21,0:25:35.67:0,36,645	1/1:9,4:13:6.02:160,6,0	1/1:20,5:24:15.04:441,15,0	1/1:13,2:15:6.02:176,6,0	0/1:5,2:6:55.07:167,0,55
chr10	67093617	.	TATAG	T	1002.06	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.168;DP=541;FS=4.389;HRun=0;HaplotypeScore=93.1471;InbreedingCoeff=0.9952;MQ=85.87;MQ0=0;MQRankSum=-5.928;QD=43.57;ReadPosRankSum=-3.063;VQSLOD=3.3445;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:33.11:0,33,889	0/0:11,0:10:24.08:0,24,574	0/0:23,0:23:66.23:0,66,1617	0/0:14,0:14:33.10:0,33,706	0/0:25,0:25:69.24:0,69,1760	0/0:22,0:22:57.20:0,57,1537	0/0:17,0:17:42.14:0,42,1124	1/1:3,20:23:60.19:1097,60,0	0/0:23,0:23:63.22:0,63,1691	0/0:32,0:32:93.32:0,93,2495	0/0:16,0:16:42.14:0,42,1089	0/0:11,0:11:24.08:0,24,648	0/0:21,0:21:54.18:0,54,1423	0/0:13,0:13:39.13:0,39,1017	0/0:17,0:17:51.18:0,51,1377	0/0:16,0:16:48.16:0,48,1264	0/0:22,0:22:66.23:0,66,1739	0/0:16,0:15:45.15:0,45,1177	0/0:15,0:15:42.14:0,42,1105	0/0:32,0:32:87.28:0,87,2180	0/0:21,0:21:63.22:0,63,1660	0/0:14,0:14:42.14:0,42,1066	0/0:22,0:22:60.21:0,60,1581	0/0:19,0:19:48.16:0,48,1261	0/0:23,0:23:69.24:0,69,1797	0/0:20,0:20:54.19:0,54,1458	0/0:22,0:22:57.20:0,57,1496	0/0:18,0:18:54.19:0,54,1428
chr10	67095104	.	C	CTCT	1763.91	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-7.548;DP=568;FS=3.710;HRun=0;HaplotypeScore=78.5197;InbreedingCoeff=0.9968;MQ=85.70;MQ0=0;MQRankSum=-5.152;QD=67.84;ReadPosRankSum=-3.428;VQSLOD=3.9672;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,132,2411	0/0:8,0:8:24.08:0,24,447	0/0:25,0:25:69.20:0,69,1138	0/0:23,0:23:65.81:0,66,1059	0/0:34,0:34:99:0,102,1901	0/0:22,0:22:66.21:0,66,1199	0/0:11,0:11:33.11:0,33,608	1/1:1,25:26:78.27:1859,78,0	0/0:23,0:23:69.24:0,69,1286	0/0:22,0:22:66.23:0,66,1229	0/0:21,0:21:63.22:0,63,1155	0/0:17,0:17:51.17:0,51,950	0/0:17,0:17:51.17:0,51,951	0/0:19,0:19:54.19:0,54,1006	0/0:20,0:20:60.21:0,60,1118	0/0:22,0:22:63.19:0,63,1112	0/0:19,0:19:54.19:0,54,1006	0/0:10,0:10:30.10:0,30,559	0/0:12,0:12:36.11:0,36,626	0/0:22,0:22:66.21:0,66,1171	0/0:31,0:30:90.29:0,90,1602	0/0:12,0:12:36.12:0,36,636	0/0:13,0:13:39.13:0,39,727	0/0:23,0:22:69.24:0,69,1286	0/0:20,0:20:60.21:0,60,1102	0/0:21,0:21:63.22:0,63,1175	0/0:18,0:18:54.16:0,54,947	0/0:13,0:13:39.13:0,39,727
chr10	67097156	.	G	GT	518.01	PASS	AB=0.944;AC=4;AF=0.071;AN=56;BaseQRankSum=-5.897;DP=498;FS=5.480;HRun=9;HaplotypeScore=50.1789;InbreedingCoeff=0.5132;MQ=74.13;MQ0=0;MQRankSum=1.824;QD=9.77;ReadPosRankSum=-2.399;VQSLOD=1.2742;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:56.99:0,57,495	0/1:7,1:8:12.18:12,0,135	0/1:14,0:12:2.21:2,0,43	0/0:9,0:9:14.67:0,15,113	0/0:22,0:22:56.96:0,57,490	0/0:17,0:17:50.99:0,51,443	0/0:7,0:7:17.95:0,18,156	1/1:10,21:31:57.11:609,57,0	0/0:26,0:26:68.96:0,69,595	0/0:25,0:25:71.98:0,72,625	0/0:26,0:26:68.96:0,69,595	0/0:14,0:14:41.99:0,42,365	0/0:17,0:17:44.99:0,45,391	0/0:12,0:12:35.99:0,36,313	0/0:14,0:13:35.99:0,36,313	0/0:19,1:21:22.83:0,23,414	0/0:21,0:21:50.99:0,51,442	0/0:11,0:11:32.37:0,32,268	0/0:23,0:23:56.97:0,57,493	0/0:37,0:38:99:0,104,891	0/0:5,0:5:15:0,15,130	0/0:14,0:14:38.98:0,39,336	0/0:19,0:19:44.98:0,45,391	0/0:8,0:8:17.99:0,18,156	0/0:26,0:26:62.96:0,63,543	0/0:17,0:17:47.99:0,48,416	0/0:17,0:17:50.97:0,51,439	0/0:15,0:15:44.73:0,45,375
chr10	67098681	.	T	TC	300.22	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-2.709;DP=538;FS=4.102;HRun=1;HaplotypeScore=84.4997;InbreedingCoeff=0.7205;MQ=59.58;MQ0=17;MQRankSum=1.892;QD=10.72;ReadPosRankSum=0.637;VQSLOD=1.7355;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:27:54.02:0,54,427	0/0:6,0:6:6.01:0,6,65	0/0:52,0:13:12.97:0,13,139	0/0:43,0:12:2.33:0,2,98	0/0:32,0:31:49.09:0,49,280	0/0:15,0:15:40.97:0,41,318	0/0:13,0:12:28.45:0,28,210	1/1:9,19:26:50.12:395,50,0	0/0:11,0:11:18.22:0,18,122	0/0:22,0:21:51.01:0,51,372	0/0:20,0:20:38.34:0,38,253	0/0:16,0:16:36.23:0,36,281	0/0:16,0:14:31.48:0,31,241	0/0:7,0:7:17.25:0,17,118	0/0:14,0:14:27.67:0,28,224	0/0:10,0:10:26.26:0,26,186	0/0:18,0:18:28.66:0,29,222	0/0:9,0:9:20.42:0,20,125	0/0:25,0:25:58.41:0,58,412	0/0:19,0:19:42.51:0,43,272	0/0:10,0:9:20.18:0,20,159	0/0:10,0:10:20.60:0,21,157	0/0:11,0:11:23.93:0,24,182	0/0:9,0:9:14.50:0,15,115	0/0:24,0:21:48.84:0,49,310	0/0:26,0:25:45.69:0,46,327	0/0:23,0:23:50.73:0,51,311	0/0:21,0:21:42.02:0,42,264
chr10	67099462	.	AAG	A	263.46	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.273;DP=499;FS=19.153;HRun=0;HaplotypeScore=61.7777;InbreedingCoeff=0.8584;MQ=72.32;MQ0=7;MQRankSum=-5.708;QD=10.54;ReadPosRankSum=-4.046;VQSLOD=0.8250;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,5:29:25.91:0,26,435	0/0:8,0:8:20.81:0,21,232	0/0:31,0:11:9.48:0,9,147	0/0:37,0:21:32.59:0,33,328	0/0:23,0:23:51.33:0,51,528	0/0:14,0:14:21.10:0,21,224	0/0:21,0:21:42.66:0,43,351	1/1:25,0:25:38.89:358,39,0	0/0:15,0:14:28.79:0,29,276	0/0:12,0:12:15.39:0,15,215	0/0:21,0:21:46.62:0,47,380	0/0:15,0:15:15.72:0,16,258	0/0:20,0:20:30.82:0,31,219	0/0:10,0:10:14.77:0,15,137	0/0:11,0:11:18.52:0,19,212	0/0:21,0:21:24.89:0,25,370	0/0:24,0:23:50.27:0,50,479	0/0:13,0:13:26.91:0,27,273	0/0:15,0:15:29.48:0,29,285	0/0:21,0:21:55.89:0,56,515	0/0:8,0:8:17.61:0,18,180	0/0:12,0:12:35.92:0,36,322	0/0:22,0:21:41.34:0,41,399	0/0:12,0:12:25.82:0,26,309	0/0:15,1:16:28.30:0,28,226	0/0:20,0:20:26.21:0,26,328	0/0:19,0:18:43.93:0,44,398	0/0:4,0:4:11.89:0,12,82
chr10	67100424	.	G	GT	2042.57	PASS	AB=0.792;AC=34;AF=0.607;AN=56;BaseQRankSum=-7.910;DP=410;FS=0.000;HRun=15;HaplotypeScore=55.9112;InbreedingCoeff=0.3746;MQ=75.02;MQ0=9;MQRankSum=2.265;QD=6.83;ReadPosRankSum=-1.719;VQSLOD=1.8470;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:14:19.19:0,19,64	0/0:5,0:10:13.10:0,13,47	0/0:43,0:21:5.91:0,6,77	0/1:37,0:18:6.19:6,0,54	0/0:9,0:18:6.18:0,6,63	1/1:7,4:12:17.10:126,17,0	0/1:2,4:4:0:0,0,0	0/1:21,4:25:71.46:71,0,78	1/1:2,10:11:17.98:151,18,0	1/1:5,17:24:41.63:300,42,0	1/1:10,12:20:12.21:182,12,0	0/1:5,4:10:15.11:82,0,15	0/1:8,0:8:16.44:16,0,27	1/1:5,2:5:5.99:48,6,0	0/1:2,8:9:2.67:86,0,3	1/1:0,8:7:11.98:101,12,0	0/0:5,0:21:29.20:0,29,94	0/1:8,4:12:48.35:61,0,48	1/1:6,6:12:17.94:142,18,0	1/1:6,3:13:19.71:148,20,0	1/1:4,7:12:10.73:177,11,0	0/0:2,0:2:2.93:0,3,18	0/1:8,1:9:5.05:5,0,87	0/0:1,1:2:2.73:0,3,12	1/1:5,8:14:8.83:65,9,0	1/1:12,3:16:14.75:137,15,0	1/1:6,14:21:26.97:225,27,0	1/1:2,5:8:13.08:93,13,0
chr10	67100689	.	G	GC	611.22	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-6.473;DP=555;FS=3.331;HRun=5;HaplotypeScore=58.1005;InbreedingCoeff=0.9829;MQ=92.24;MQ0=0;MQRankSum=-2.622;QD=32.17;ReadPosRankSum=-2.720;VQSLOD=3.2327;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:72.15:0,72,764	0/0:5,0:5:15.04:0,15,161	0/0:19,0:19:48.09:0,48,500	0/0:33,0:33:74.85:0,75,780	0/0:21,0:21:57.14:0,57,612	0/0:15,0:15:33.08:0,33,354	0/0:18,0:18:45.11:0,45,484	1/1:1,18:19:54.18:706,54,0	0/0:18,0:18:51.13:0,51,548	0/0:22,0:22:63.15:0,63,671	0/0:21,0:21:60.12:0,60,628	0/0:25,0:25:66.13:0,66,698	0/0:17,0:17:48.12:0,48,516	0/0:21,0:21:54.12:0,54,571	0/0:28,0:28:72.18:0,72,774	0/0:17,0:17:45.11:0,45,484	0/0:27,0:27:69.17:0,69,741	0/0:10,0:10:30.08:0,30,322	0/0:16,0:16:36.09:0,36,387	0/0:23,0:23:63.16:0,63,676	0/0:25,0:25:72.18:0,72,774	0/0:15,0:15:42.10:0,42,451	0/0:15,0:15:45.11:0,45,483	0/0:15,0:15:42.08:0,42,442	0/0:15,0:15:39.10:0,39,419	0/0:19,0:19:57.14:0,57,613	0/0:34,0:34:96.24:0,96,1031	0/0:11,0:11:30.08:0,30,322
chr10	67100905	.	CTTTCT	C	1730.53	PASS	AB=0.948;AC=19;AF=0.352;AN=54;BaseQRankSum=-1.561;DP=464;FS=0.000;HRun=0;HaplotypeScore=92.9616;InbreedingCoeff=0.0652;MQ=54.03;MQ0=7;MQRankSum=3.177;QD=6.92;ReadPosRankSum=-1.815;VQSLOD=1.8446;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:72.43:0,72,1040	0/0:9,0:9:0.48:0,0,64	0/0:13,0:8:17.52:0,18,227	0/0:10,0:7:13.78:0,14,160	0/0:25,0:25:41.45:0,41,867	0/1:9,1:11:21.83:147,0,22	0/1:6,8:14:56.70:59,0,57	0/0:26,0:25:57.56:0,58,650	0/0:8,0:8:3.05:0,3,31	1/1:18,0:18:27.65:268,28,0	1/1:21,0:21:12.64:194,13,0	0/1:12,0:12:14.99:15,0,55	0/0:15,0:15:24.43:0,24,420	0/1:11,0:11:33.99:65,0,34	0/1:19,0:19:29.88:92,0,30	0/1:15,0:16:26.99:197,0,27	0/0:21,0:20:7.48:0,7,420	0/1:14,0:13:30.78:31,0,41	0/1:21,0:20:64.17:128,0,64	1/1:26,0:23:9.37:242,9,0	0/1:4,0:4:0.76:1,0,8	0/0:16,0:16:25.66:0,26,339	0/0:15,0:15:41.32:0,41,716	0/0:24,0:23:41.71:0,42,666	0/1:15,0:14:37.38:116,0,37	1/1:21,0:21:18.15:284,18,0	0/1:27,0:27:62.65:63,0,96	./.
chr10	67100906	.	TTTC	T	4056.85	PASS	AB=0.967;AC=30;AF=0.556;AN=54;BaseQRankSum=-3.317;DP=462;FS=1.492;HRun=0;HaplotypeScore=68.9794;InbreedingCoeff=0.8712;MQ=52.45;MQ0=8;MQRankSum=0.409;QD=15.72;ReadPosRankSum=-2.276;VQSLOD=2.4728;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:66.21:0,66,640	0/0:7,0:7:13.87:0,14,76	0/0:13,0:8:17.51:0,18,181	0/0:9,0:6:14.94:0,15,152	0/0:26,0:26:48.68:0,49,592	1/1:11,1:12:24.71:214,25,0	0/1:13,1:14:3.08:78,0,3	0/0:26,0:25:59.26:0,59,572	1/1:7,0:7:16.42:122,16,0	1/1:18,0:18:43.13:343,43,0	1/1:22,0:21:50.82:430,51,0	1/1:12,0:12:20.48:116,20,0	0/0:15,0:15:20.55:0,21,281	1/1:11,0:11:19.58:166,20,0	1/1:18,0:18:24.96:222,25,0	1/1:16,0:16:30.09:341,30,0	0/0:21,0:20:36.57:0,37,309	1/1:12,1:12:26.70:224,27,0	1/1:21,0:20:6.47:231,6,0	1/1:24,2:23:57.53:494,58,0	0/1:4,0:4:4.03:16,0,4	0/0:16,0:16:31.24:0,31,268	0/0:16,0:16:40.77:0,41,460	0/0:23,0:22:41.82:0,42,458	1/1:16,0:15:24.22:290,24,0	1/1:20,1:21:40.75:374,41,0	1/1:27,0:27:52.81:398,53,0	./.
chr10	67100908	.	TC	T	4285.64	PASS	AB=0.980;AC=33;AF=0.589;AN=56;BaseQRankSum=-4.535;DP=456;FS=4.582;HRun=1;HaplotypeScore=52.3100;InbreedingCoeff=0.7757;MQ=50.21;MQ0=9;MQRankSum=-1.703;QD=15.76;ReadPosRankSum=-4.998;VQSLOD=2.9099;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:38.25:0,38,462	0/0:9,0:9:10.70:0,11,66	0/0:12,0:7:17.52:0,18,140	0/0:8,0:5:13.27:0,13,134	0/0:25,0:25:26.68:0,27,399	1/1:12,0:12:30.86:239,31,0	1/1:13,0:13:10.05:66,10,0	0/0:23,0:22:57.71:0,58,461	1/1:8,0:8:19.56:163,20,0	1/1:1,17:18:46.79:368,47,0	1/1:21,0:20:52.44:437,52,0	1/1:11,0:11:23.22:159,23,0	0/0:14,0:14:15.50:0,16,179	1/1:11,0:11:27.05:213,27,0	1/1:18,0:18:36.15:251,36,0	1/1:17,0:17:26.98:349,27,0	0/0:20,0:19:23.80:0,24,222	1/1:13,0:12:28.08:206,28,0	0/1:18,0:17:1.66:238,0,2	1/1:26,1:24:61.16:464,61,0	0/1:5,0:5:9.58:18,0,10	0/1:15,1:16:10.15:10,0,194	0/0:16,0:16:40.20:0,40,323	0/0:23,0:22:42.04:0,42,331	1/1:15,0:14:16.46:289,16,0	1/1:18,1:18:44.74:375,45,0	1/1:27,0:27:55.13:424,55,0	1/1:3,0:3:2.92:17,3,0
chr10	67103735	.	CCAAA	C	154.36	PASS	AB=0.957;AC=13;AF=0.241;AN=54;BaseQRankSum=9.013;DP=315;FS=61.280;HRun=0;HaplotypeScore=56.7569;InbreedingCoeff=-0.1731;MQ=40.37;MQ0=28;MQRankSum=-3.416;QD=1.08;ReadPosRankSum=1.272;VQSLOD=-0.5903;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:28:16.27:16,0,157	1/1:1,0:1:2.50:9,2,0	0/0:11,0:1:2.04:0,2,6	./.	0/0:6,0:6:14.89:0,15,126	0/1:16,0:16:56.43:56,0,169	0/1:10,4:14:11.65:12,0,140	0/0:17,0:14:28.57:0,29,208	0/1:6,0:7:1.72:2,0,57	0/1:10,1:8:36.79:37,0,115	0/0:7,0:7:6.25:0,6,77	0/0:12,0:12:3.39:0,3,230	0/0:8,0:7:21.03:0,21,317	0/1:8,0:8:23.30:23,0,76	0/0:7,1:8:4.12:0,4,113	0/1:5,0:4:1.36:1,0,62	0/0:26,0:22:9.64:0,10,131	0/1:24,1:22:48.99:49,0,300	0/0:12,0:11:29.76:0,30,226	0/0:7,0:7:12.52:0,13,125	0/1:10,0:6:8.52:9,0,68	0/1:3,0:3:12.52:13,0,17	0/0:5,0:5:14.98:0,15,175	0/0:12,0:12:30.47:0,30,414	0/0:6,0:5:14.62:0,15,101	0/1:14,0:12:63.30:63,0,91	0/0:17,0:15:20:0,20,214	0/0:6,0:5:8.99:0,9,93
chr10	67106379	.	G	GT	1010.51	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=5.659;DP=563;FS=3.827;HRun=1;HaplotypeScore=77.3849;InbreedingCoeff=0.9541;MQ=65.56;MQ0=1;MQRankSum=-0.155;QD=16.30;ReadPosRankSum=2.265;VQSLOD=4.0544;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,17:19:39.07:395,39,0	1/1:1,7:8:6.01:59,6,0	0/0:12,0:8:23.91:0,24,291	0/0:16,0:13:29.65:0,30,471	0/0:26,0:26:75.10:0,75,974	0/0:22,0:22:66.21:0,66,907	0/0:7,0:7:21.07:0,21,292	0/0:34,0:34:89.37:0,89,771	0/0:19,0:19:57.19:0,57,789	0/0:23,0:23:69.23:0,69,964	0/0:31,0:31:72.20:0,72,969	0/0:18,0:18:48.16:0,48,667	0/0:18,0:18:54.15:0,54,734	0/0:14,0:14:39.13:0,39,545	0/0:19,0:19:56:0,56,758	0/0:15,0:15:42.11:0,42,551	1/1:5,29:34:57.06:691,57,0	0/0:11,0:11:17.37:0,17,322	0/0:28,0:28:81.25:0,81,1099	0/0:41,0:41:99:0,120,1607	0/0:13,0:13:33.05:0,33,461	0/0:14,0:14:39.13:0,39,543	0/0:18,0:18:37.67:0,38,505	0/0:14,0:14:42.14:0,42,587	0/0:23,0:23:63.21:0,63,877	0/0:31,0:31:93.29:0,93,1263	0/0:27,0:27:78.26:0,78,1084	0/0:7,0:7:21.07:0,21,292
chr10	67106380	.	G	GT	1780.10	PASS	AB=0.958;AC=10;AF=0.179;AN=56;BaseQRankSum=4.960;DP=565;FS=5.999;HRun=10;HaplotypeScore=73.5270;InbreedingCoeff=0.7195;MQ=65.38;MQ0=1;MQRankSum=-1.443;QD=14.24;ReadPosRankSum=-2.309;VQSLOD=3.3088;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:20:42.07:432,42,0	1/1:8,0:8:6.02:64,6,0	0/0:11,0:8:15.45:0,15,82	0/1:16,0:13:23.67:24,0,52	0/0:24,1:26:29.98:0,30,442	0/0:22,0:22:37.39:0,37,467	0/0:7,0:7:8.97:0,9,74	1/1:16,20:36:28.17:685,28,0	0/0:18,0:19:43.98:0,44,351	0/0:24,0:24:53.90:0,54,442	0/0:29,1:31:29.96:0,30,438	0/0:18,0:18:38.92:0,39,320	0/0:18,0:18:41.94:0,42,345	0/0:14,0:14:35.95:0,36,295	0/0:19,0:19:13.01:0,13,310	0/0:15,0:15:41.90:0,42,335	1/1:34,0:33:61.29:730,61,0	0/1:9,1:11:6.23:6,0,136	0/0:29,0:29:68.85:0,69,559	0/0:40,0:40:75.31:0,75,743	0/0:13,0:13:12.62:0,13,242	0/0:14,0:14:26.91:0,27,217	0/0:15,0:17:29.64:0,30,242	0/0:14,0:14:38.94:0,39,320	0/0:23,0:23:50.93:0,51,419	0/0:29,0:30:76.91:0,77,618	0/0:27,0:27:68.85:0,69,558	0/0:7,0:7:14.97:0,15,123
chr10	67106402	.	TTTTTTGTTTTG	T	1131.04	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.548;DP=565;FS=9.797;HRun=0;HaplotypeScore=186.2061;InbreedingCoeff=0.7797;MQ=62.70;MQ0=4;MQRankSum=-1.271;QD=36.49;ReadPosRankSum=-3.686;VQSLOD=1.9836;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:39.13:0,39,1769	0/0:8,0:8:12.92:0,13,345	0/0:15,0:10:18.05:0,18,515	0/0:14,0:9:1.65:0,2,128	0/0:34,0:34:94.50:0,94,3740	0/0:22,0:22:54.19:0,54,2729	0/0:12,0:12:33.11:0,33,1130	1/1:15,16:31:72.19:1226,72,0	0/0:20,0:20:51.17:0,51,2315	0/0:24,0:24:69.24:0,69,3070	0/0:32,0:32:66.22:0,66,2873	0/0:17,0:17:48.16:0,48,2241	0/0:17,0:17:48.13:0,48,2073	0/0:15,0:15:39.13:0,39,1454	0/0:17,0:17:48.08:0,48,2086	0/0:15,0:15:39.13:0,39,1563	0/0:33,0:32:84.19:0,84,3640	0/0:13,0:13:33.11:0,33,1375	0/0:32,0:30:69.24:0,69,3017	0/0:29,0:29:84.25:0,84,3862	0/0:10,0:10:27.09:0,27,1345	0/0:13,0:13:36.12:0,36,1734	0/0:14,0:14:36.12:0,36,1800	0/0:20,0:20:51.17:0,51,2161	0/0:21,0:21:54.19:0,54,2495	0/0:31,0:31:72.24:0,72,3496	0/0:33,0:33:90.31:0,90,3910	0/0:4,0:4:12.04:0,12,500
chr10	67106751	.	AGAGAGGAG	A	45.46	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.809;DP=705;FS=1.937;HRun=0;HaplotypeScore=162.5566;InbreedingCoeff=0.8888;MQ=68.49;MQ0=15;MQRankSum=-2.748;QD=5.05;ReadPosRankSum=-3.372;VQSLOD=1.8135;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:90.19:0,90,3320	0/0:3,0:2:6.02:0,6,264	0/0:57,0:31:74.17:0,74,1723	0/0:58,0:29:65.51:0,66,1389	0/0:19,0:19:57.16:0,57,2131	0/0:27,0:27:60.05:0,60,2060	0/0:25,0:25:66.17:0,66,2608	1/1:3,6:7:14.98:134,15,0	0/0:33,0:32:68.53:0,69,2386	0/0:22,0:22:66.17:0,66,2073	0/0:17,0:17:33.10:0,33,1223	0/0:22,0:22:48.16:0,48,1781	0/0:22,0:22:50.75:0,51,1874	0/0:17,0:17:36.11:0,36,1396	0/0:30,0:29:72.24:0,72,3011	0/0:18,0:18:45.15:0,45,1876	0/0:35,0:34:84.23:0,84,3239	0/0:25,0:21:48.05:0,48,1343	0/0:15,0:14:39.13:0,39,1558	0/0:20,0:20:60.19:0,60,2411	0/0:31,0:29:66.17:0,66,2553	0/0:18,0:18:51.13:0,51,1819	0/0:18,0:18:54.12:0,54,1907	0/0:38,0:37:63.18:0,63,2428	0/0:15,0:15:42.13:0,42,1543	0/0:25,0:25:69.21:0,69,2794	0/0:25,0:24:63.20:0,63,2293	0/0:14,0:14:39.12:0,39,1607
chr10	67107091	.	A	AT	1323.33	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-8.291;DP=465;FS=7.055;HRun=8;HaplotypeScore=51.8234;InbreedingCoeff=0.9047;MQ=69.40;MQ0=0;MQRankSum=1.597;QD=26.47;ReadPosRankSum=2.033;VQSLOD=4.3679;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,23:24:60.18:692,60,0	1/1:0,3:3:9.03:104,9,0	0/0:17,0:17:36.32:0,36,315	0/0:7,0:8:4.16:0,4,73	0/0:23,2:25:28.41:0,28,514	0/0:16,0:16:36.02:0,36,329	0/0:11,0:11:30.01:0,30,275	0/0:30,0:30:69.01:0,69,627	0/0:14,0:14:39.02:0,39,357	0/0:18,0:18:54.03:0,54,494	0/0:15,0:15:30.01:0,30,275	0/0:16,0:16:26.97:0,27,239	0/0:15,0:15:42.02:0,42,384	0/0:8,0:8:15.01:0,15,137	0/0:10,0:10:20.97:0,21,185	0/0:9,0:9:27:0,27,243	1/1:2,20:23:36.07:664,36,0	0/0:18,0:18:48.01:0,48,435	0/0:12,0:12:36.01:0,36,326	0/0:34,0:34:96.03:0,96,873	0/0:5,0:5:15.01:0,15,137	0/0:8,0:8:21.01:0,21,192	0/0:23,0:23:62.93:0,63,571	0/0:5,0:5:12:0,12,106	0/0:32,0:32:71.97:0,72,650	0/0:20,0:20:48.02:0,48,439	0/0:26,0:26:66.04:0,66,604	0/0:20,0:20:54.03:0,54,494
chr10	67112160	.	AG	A	842.04	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.727;DP=559;FS=1.532;HRun=3;HaplotypeScore=59.1928;InbreedingCoeff=0.9448;MQ=88.31;MQ0=0;MQRankSum=1.392;QD=30.07;ReadPosRankSum=-3.416;VQSLOD=1.9677;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:63.19:0,63,886	0/0:3,0:3:9.03:0,9,130	0/0:26,0:26:72.96:0,73,997	0/0:26,1:27:71.43:0,71,838	0/0:26,0:26:69.23:0,69,990	0/0:24,0:24:72.16:0,72,1008	0/0:20,0:20:60.16:0,60,809	1/1:0,28:28:84.10:937,84,0	0/0:15,0:15:45.15:0,45,646	0/0:24,0:24:66.18:0,66,896	0/0:21,0:21:60.20:0,60,862	0/0:12,0:12:36.11:0,36,501	0/0:15,0:15:45.11:0,45,593	0/0:18,0:18:54.18:0,54,777	0/0:22,0:22:66.21:0,66,934	0/0:16,0:16:48.15:0,48,675	0/0:22,0:22:63.13:0,63,808	0/0:13,0:13:39.13:0,39,561	0/0:30,0:30:87.23:0,87,1141	0/0:27,0:27:81.25:0,81,1127	0/0:18,0:18:54.18:0,54,777	0/0:18,0:18:54.16:0,54,758	0/0:13,0:13:36.12:0,36,518	0/0:17,0:17:48.16:0,48,688	0/0:24,0:24:72.22:0,72,988	0/0:27,0:27:81.25:0,81,1132	0/0:19,0:18:57.17:0,57,795	0/0:12,0:12:36.09:0,36,481
chr10	67112583	.	CT	C	1534.04	PASS	AB=0.721;AC=38;AF=0.679;AN=56;BaseQRankSum=-0.027;DP=447;FS=12.020;HRun=17;HaplotypeScore=55.3734;InbreedingCoeff=0.1483;MQ=76.82;MQ0=10;MQRankSum=-0.041;QD=3.87;ReadPosRankSum=1.203;VQSLOD=-0.4114;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:15,22:34:19.91:184,0,20	1/1:1,5:6:2.85:17,3,0	0/1:32,0:15:11:11,0,32	0/0:24,0:19:17.52:0,18,109	0/1:14,1:14:2.06:2,0,62	0/1:5,5:10:4.29:70,0,4	0/1:7,6:16:9.15:36,0,9	1/1:13,0:25:19.62:66,20,0	1/1:3,9:14:0.29:87,0,0	1/1:11,14:26:30.24:165,30,0	0/1:5,9:14:17.48:47,0,17	1/1:6,4:13:5.92:55,6,0	0/1:9,1:10:3.81:4,0,35	1/1:4,2:6:7.83:39,8,0	1/1:4,1:5:2.86:17,3,0	1/1:4,5:10:13.69:72,14,0	1/1:10,23:34:33.20:162,33,0	0/1:7,9:17:25.72:51,0,26	1/1:10,7:20:24.81:115,25,0	1/1:5,7:13:13.21:72,13,0	1/1:6,6:12:5.74:33,6,0	0/0:6,0:5:2.98:0,3,22	0/0:10,0:10:8.20:0,8,53	0/0:8,2:10:8.97:0,9,71	0/1:7,3:12:1.16:46,0,1	1/1:3,10:13:7.69:119,8,0	1/1:4,12:17:31.19:173,31,0	0/1:2,6:9:4.83:56,0,5
chr10	67113299	.	A	AT	13058.71	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-9.600;DP=524;FS=1.483;HRun=1;HaplotypeScore=50.2583;InbreedingCoeff=0.9966;MQ=82.21;MQ0=0;MQRankSum=-2.980;QD=39.93;ReadPosRankSum=2.204;VQSLOD=5.3547;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:57.16:0,57,724	0/0:9,0:9:27.07:0,27,334	0/0:20,0:20:42.65:0,43,683	0/0:10,0:10:25.36:0,25,269	0/0:29,0:29:87.27:0,87,1117	1/1:1,18:19:54.18:809,54,0	1/1:1,10:11:18.06:270,18,0	0/0:21,0:21:60.17:0,60,744	1/1:0,18:18:51.17:764,51,0	1/1:1,26:27:78.26:1169,78,0	1/1:0,20:20:57.06:779,57,0	1/1:2,14:16:36.12:539,36,0	0/0:23,0:23:66.21:0,66,856	1/1:0,15:15:39.13:585,39,0	1/1:1,19:20:54.18:809,54,0	1/1:0,12:12:30.10:450,30,0	0/0:14,0:14:42.12:0,42,530	1/1:0,17:17:51.17:763,51,0	1/1:2,20:22:60.16:838,60,0	1/1:0,34:34:96.33:1439,96,0	1/1:0,14:14:36.12:539,36,0	0/0:16,0:16:48.16:0,48,623	0/0:29,0:29:84.25:0,84,1064	0/0:7,0:7:21.07:0,21,273	1/1:0,23:23:66.22:989,66,0	1/1:0,18:18:54.17:787,54,0	1/1:1,33:34:83.89:1258,84,0	1/1:0,7:7:18.06:270,18,0
chr10	67114196	.	G	GA	1877.12	PASS	AB=0.854;AC=32;AF=0.571;AN=56;BaseQRankSum=-1.648;DP=602;FS=16.720;HRun=17;HaplotypeScore=89.0470;InbreedingCoeff=-0.0196;MQ=61.15;MQ0=23;MQRankSum=-1.425;QD=3.95;ReadPosRankSum=-0.601;VQSLOD=-0.6322;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:37,4:43:33.84:208,34,0	1/1:4,1:10:13.16:76,13,0	0/0:52,0:15:9.45:0,9,52	0/1:47,0:16:5.82:8,0,6	0/0:10,0:15:16.62:0,17,69	0/1:12,8:20:6.45:6,0,50	0/1:9,3:14:45.20:54,0,45	1/1:18,3:24:17.94:152,18,0	0/1:10,6:17:4.35:117,0,4	1/1:7,12:24:15.21:198,15,0	1/1:16,3:20:1.35:150,1,0	1/1:8,7:14:11.95:91,12,0	0/1:17,0:19:0.58:1,0,41	0/1:8,3:11:7.26:102,0,7	0/1:3,1:8:10.40:24,0,10	1/1:8,5:13:5.83:37,6,0	1/1:16,15:33:21.36:143,21,0	1/1:18,1:17:16.07:103,16,0	0/1:18,3:22:14.68:164,0,15	0/1:25,2:27:53.51:108,0,54	0/1:8,1:9:3.28:37,0,3	0/0:19,0:20:2.22:0,2,59	0/0:15,0:16:1.14:0,1,57	0/0:22,0:24:32.25:0,32,162	0/1:12,3:15:54.26:75,0,54	0/1:21,2:23:39.48:83,0,39	0/1:24,2:27:51.20:73,0,51	0/1:9,1:8:16.27:35,0,16
chr10	67114719	.	TAA	T	7461.75	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-4.954;DP=518;FS=2.490;HRun=13;HaplotypeScore=73.8088;InbreedingCoeff=0.9723;MQ=80.46;MQ0=5;MQRankSum=-0.633;QD=22.48;ReadPosRankSum=2.196;VQSLOD=4.8394;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:1,0:26:52.40:0,52,183	0/0:3,0:12:19.96:0,20,70	0/0:41,1:17:14.70:0,15,118	0/0:30,0:21:11.86:0,12,167	1/1:4,22:26:57:551,57,0	1/1:2,21:23:54.07:524,54,0	1/1:1,11:12:27.04:262,27,0	1/1:6,16:23:47.75:443,48,0	1/1:1,15:16:39.06:378,39,0	1/1:1,13:15:41.80:390,42,0	1/1:4,15:18:38.99:369,39,0	1/1:2,13:15:30.01:291,30,0	0/0:3,0:3:9.03:0,9,129	1/1:2,9:11:27.03:262,27,0	1/1:1,10:11:30.03:291,30,0	1/1:0,15:15:42.07:407,42,0	0/0:2,0:21:37.03:0,37,128	1/1:5,18:22:42.01:407,42,0	1/1:4,14:18:42.04:406,42,0	1/1:3,26:29:78.11:754,78,0	1/1:1,9:10:24:233,24,0	0/0:15,0:15:39.13:0,39,547	0/0:19,0:21:56.66:0,57,768	0/0:12,0:13:35.61:0,36,485	1/1:1,21:22:45.07:436,45,0	1/1:2,19:22:50.88:543,51,0	1/1:0,18:19:38.87:426,39,0	1/1:0,3:3:9.01:87,9,0
chr10	67115905	.	T	TCACACACACACA	8026.50	PASS	AB=0.956;AC=35;AF=0.625;AN=56;BaseQRankSum=3.718;DP=503;FS=0.653;HRun=0;HaplotypeScore=193.4405;InbreedingCoeff=0.5528;MQ=63.34;MQ0=11;MQRankSum=-8.225;QD=24.62;ReadPosRankSum=-2.462;VQSLOD=3.8471;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:24:0.94:0,1,1	1/1:9,0:9:6.02:210,6,0	0/0:26,0:16:12.04:0,12,270	0/0:28,0:23:19.28:0,19,466	0/0:14,0:14:3.01:0,3,36	1/1:22,0:21:15.05:451,15,0	0/0:10,10:23:0.47:0,0,1	1/1:32,0:31:47.83:990,48,0	1/1:19,0:18:3:26,3,0	1/1:15,0:13:24.02:640,24,0	1/1:11,0:11:3.01:50,3,0	1/1:13,0:13:11.66:374,12,0	0/0:11,0:11:21.05:0,21,562	1/1:21,0:20:21.06:642,21,0	1/1:17,0:17:5.84:123,6,0	1/1:14,0:14:11.97:334,12,0	1/1:13,0:12:9.03:264,9,0	0/1:11,1:12:24.93:403,0,25	1/1:18,0:16:33.08:990,33,0	0/1:26,0:25:89.63:238,0,90	0/1:13,0:11:35.70:132,0,36	0/0:14,0:13:27.09:0,27,922	0/0:18,0:18:21.07:0,21,649	0/0:18,0:18:33.11:0,33,1040	1/1:19,0:18:3:110,3,0	1/1:20,0:20:34.41:725,34,0	1/1:22,0:22:29.62:956,30,0	1/1:9,0:9:12.04:369,12,0
chr10	67115924	.	CACAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG	C	189.85	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=0.266;DP=476;FS=3.008;HRun=0;HaplotypeScore=346.3888;InbreedingCoeff=0.4462;MQ=45.15;MQ0=18;MQRankSum=-0.982;QD=11.87;ReadPosRankSum=-1.875;VQSLOD=1.0949;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:22:5.33:0,5,46	0/0:5,0:5:6.02:0,6,278	0/0:16,0:7:15.01:0,15,159	0/0:16,0:11:22.03:0,22,197	1/1:1,15:15:5.95:270,6,0	0/0:27,0:26:18.03:0,18,858	0/0:18,0:17:7.39:0,7,43	0/0:24,0:23:68.32:0,68,1274	0/0:17,0:16:0.47:0,0,1	0/0:15,0:13:35.99:0,36,2049	0/0:15,0:14:6.01:0,6,172	0/0:14,0:14:17.86:0,18,538	0/0:10,0:9:27.05:0,27,2522	0/0:19,0:18:21.41:0,21,943	0/0:16,0:16:2.91:0,3,301	0/0:16,0:16:15.11:0,15,670	0/0:12,0:11:13.59:0,14,282	0/0:14,0:13:30.07:0,30,1815	0/0:18,0:16:37.78:0,38,1712	0/0:23,0:21:17.85:0,18,750	0/0:18,0:16:9:0,9,576	0/0:17,0:15:39.04:0,39,2520	0/0:18,0:18:24:0,24,1068	0/0:23,0:22:43.92:0,44,2983	0/0:19,0:18:3.01:0,3,56	0/0:20,0:20:56.92:0,57,2958	0/0:17,0:17:30.02:0,30,1942	0/0:10,0:9:26.22:0,26,1252
chr10	67115926	.	CAGAGAGAGAGAGAGAG	C	1023.56	PASS	AB=0.869;AC=16;AF=0.348;AN=46;BaseQRankSum=3.427;DP=470;FS=50.403;HRun=0;HaplotypeScore=203.8811;InbreedingCoeff=0.0706;MQ=44.82;MQ0=17;MQRankSum=-3.569;QD=5.59;ReadPosRankSum=-2.634;VQSLOD=0.9129;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:21:0.47:1,0,0	0/0:5,0:5:3:0,3,27	./.	./.	1/1:16,0:15:3.01:67,3,0	0/1:20,5:26:9:9,0,68	./.	0/0:25,0:24:3.01:0,3,106	./.	1/1:13,0:13:4.04:242,4,0	1/1:11,4:14:3.01:123,3,0	1/1:13,0:14:2.50:9,2,0	0/0:10,0:9:18.06:0,18,701	0/0:16,2:18:9.46:0,9,110	0/0:10,6:17:2.83:0,3,27	0/1:12,2:16:59.40:104,0,59	0/0:10,0:11:1.25:0,1,3	0/1:14,0:13:49.17:69,0,49	0/0:18,0:16:10.78:0,11,108	0/0:20,1:21:2.98:0,3,123	0/0:18,0:16:3.01:0,3,193	0/0:16,0:14:15.05:0,15,791	0/0:16,0:19:6.02:0,6,268	0/0:22,0:22:16.94:0,17,574	./.	0/1:15,0:20:84.18:404,0,84	0/1:16,0:17:6.24:6,0,127	0/1:6,1:6:99:119,0,103
chr10	67116827	.	A	AT	8447.32	PASS	AB=0.811;AC=43;AF=0.768;AN=56;BaseQRankSum=-8.455;DP=614;FS=1.248;HRun=12;HaplotypeScore=70.7140;InbreedingCoeff=0.6709;MQ=81.52;MQ0=1;MQRankSum=-0.081;QD=17.17;ReadPosRankSum=2.880;VQSLOD=6.0430;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,26:31:72.06:685,72,0	1/1:2,1:3:3:29,3,0	0/1:31,1:25:10.95:11,0,116	0/1:19,1:18:7.83:8,0,90	0/0:31,0:34:81.50:0,81,572	1/1:2,17:20:29:428,29,0	1/1:3,17:20:42.07:409,42,0	1/1:10,13:23:35.98:331,36,0	1/1:2,17:20:29.01:430,29,0	1/1:7,18:25:54.02:500,54,0	1/1:5,20:25:5.04:347,5,0	1/1:4,9:13:11.17:244,11,0	0/0:23,0:23:56.63:0,57,416	0/1:3,14:17:10.76:230,0,11	1/1:4,12:16:30.05:292,30,0	1/1:5,9:15:17.19:199,17,0	1/1:2,20:23:41.03:546,41,0	1/1:4,24:28:60.10:584,60,0	1/1:3,18:21:57.08:551,57,0	1/1:7,25:32:52.77:605,53,0	1/1:6,16:22:36.05:348,36,0	0/0:21,0:21:56.62:0,57,410	0/0:24,0:25:31.37:0,31,351	0/0:19,0:19:47.68:0,48,347	1/1:5,12:17:32.99:310,33,0	1/1:5,24:28:66.08:630,66,0	1/1:5,24:31:49.97:615,50,0	1/1:2,5:7:12.02:117,12,0
chr10	67120518	.	TC	T	876.42	PASS	AC=6;AF=0.120;AN=50;BaseQRankSum=1.364;DP=307;FS=14.237;HRun=1;HaplotypeScore=79.8187;InbreedingCoeff=0.6293;MQ=36.91;MQ0=34;MQRankSum=3.285;QD=14.61;ReadPosRankSum=3.857;VQSLOD=1.9378;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,24:27:48.14:545,48,0	1/1:0,2:2:3.01:31,3,0	./.	./.	0/0:8,0:7:10.82:0,11,44	0/0:7,0:7:14.31:0,14,54	0/0:11,0:10:18.52:0,19,95	0/0:21,0:18:42.30:0,42,248	0/0:11,0:9:9.27:0,9,40	0/0:11,0:11:11.76:0,12,42	0/0:10,0:10:3.80:0,4,29	0/0:12,0:12:20.77:0,21,107	0/0:7,0:6:8.63:0,9,58	0/0:11,0:9:9.48:0,9,45	0/0:8,0:7:11.93:0,12,50	0/0:3,0:2:2.96:0,3,19	1/1:5,22:23:28.19:428,28,0	0/0:16,0:14:19.24:0,19,90	0/0:5,0:2:5.67:0,6,33	0/0:7,0:6:7.61:0,8,25	0/0:10,0:9:10.83:0,11,59	0/0:11,0:11:14.33:0,14,91	0/0:11,0:9:19.42:0,19,117	0/0:24,0:23:33.04:0,33,222	0/0:12,0:10:6.29:0,6,30	0/0:15,0:14:22.71:0,23,104	0/0:10,0:8:5.88:0,6,22	./.
chr10	67120651	.	GA	G	218.01	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=1.409;DP=430;FS=5.433;HRun=2;HaplotypeScore=67.2668;InbreedingCoeff=0.9433;MQ=58.46;MQ0=1;MQRankSum=1.891;QD=27.25;ReadPosRankSum=1.970;VQSLOD=3.2338;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:81.24:0,81,1170	0/0:6,0:6:18.06:0,18,264	0/0:21,0:15:32.06:0,32,477	0/0:19,0:19:54.11:0,54,704	1/1:0,8:8:24.08:311,24,0	0/0:5,0:5:15.01:0,15,199	0/0:21,0:21:60.19:0,60,867	0/0:15,0:14:36.03:0,36,460	0/0:16,0:16:36.08:0,36,512	0/0:17,0:17:51.09:0,51,705	0/0:19,0:19:54.14:0,54,776	0/0:16,0:16:45.15:0,45,671	0/0:10,0:10:27.09:0,27,403	0/0:12,0:12:36.12:0,36,537	0/0:10,0:10:30.10:0,30,428	0/0:10,0:10:30.10:0,30,447	0/0:26,0:26:78.26:0,78,1154	0/0:16,0:16:39.10:0,39,560	0/0:13,0:13:36.12:0,36,533	0/0:12,0:12:33.07:0,33,465	0/0:16,0:16:42.13:0,42,588	0/0:16,0:16:45.07:0,45,623	0/0:17,0:17:51.13:0,51,726	0/0:24,0:24:69.19:0,69,984	0/0:14,0:14:42.10:0,42,582	0/0:17,0:17:51.12:0,51,711	0/0:17,0:17:51.11:0,51,715	0/0:4,0:4:12.04:0,12,179
chr10	67120735	.	TCG	T	6510.25	PASS	AC=52;AF=0.963;AN=54;BaseQRankSum=1.587;DP=195;FS=0.000;HRun=0;HaplotypeScore=191.6465;InbreedingCoeff=0.4111;MQ=34.47;MQ0=0;MQRankSum=-1.732;QD=33.91;ReadPosRankSum=1.569;VQSLOD=5.2354;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,1:9:27.05:296,27,0	1/1:4,0:4:12.04:148,12,0	./.	0/0:3,0:3:2.90:0,3,16	1/1:15,0:15:44.68:462,45,0	1/1:6,1:7:21.06:248,21,0	1/1:8,0:8:24.06:273,24,0	1/1:3,1:4:12.04:150,12,0	1/1:8,0:8:24.07:284,24,0	1/1:10,0:10:30.09:398,30,0	1/1:18,0:18:54.09:565,54,0	1/1:4,0:4:12.03:140,12,0	1/1:8,0:8:21.03:225,21,0	1/1:3,0:3:8.99:86,9,0	1/1:7,0:7:21.06:247,21,0	1/1:6,0:6:18.05:219,18,0	1/1:4,0:4:12.03:137,12,0	1/1:2,0:2:3.01:48,3,0	1/1:3,0:3:9.03:112,9,0	1/1:8,1:10:30.09:349,30,0	1/1:2,0:2:6.02:72,6,0	1/1:11,1:12:36.11:418,36,0	1/1:11,0:11:32.76:348,33,0	1/1:2,0:2:5.38:51,5,0	1/1:11,0:11:33.10:379,33,0	1/1:10,0:10:30.10:381,30,0	1/1:9,0:9:26.93:287,27,0	1/1:4,1:5:15.05:190,15,0
chr10	67120738	.	T	TTC	7225.56	PASS	AC=52;AF=0.963;AN=54;BaseQRankSum=-1.028;DP=264;FS=1.932;HRun=0;HaplotypeScore=282.8508;InbreedingCoeff=0.5072;MQ=32.72;MQ0=0;MQRankSum=-0.441;QD=27.68;ReadPosRankSum=3.847;VQSLOD=5.0784;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,8:11:31.78:299,32,0	1/1:2,4:6:15.04:159,15,0	./.	0/0:2,0:3:3.01:0,3,35	1/1:5,15:20:50.27:469,50,0	1/1:3,6:9:24.06:253,24,0	1/1:3,7:10:29.84:316,30,0	1/1:6,3:9:21.37:244,21,0	1/1:6,7:13:38.93:419,39,0	1/1:7,10:17:45.39:475,45,0	1/1:2,18:20:59.90:563,60,0	1/1:3,4:7:17.70:160,18,0	1/1:3,7:10:26.24:231,26,0	1/1:3,2:5:10.13:103,10,0	1/1:4,7:11:27.81:271,28,0	1/1:1,6:7:21.05:235,21,0	1/1:0,4:4:12.02:119,12,0	1/1:2,1:3:8.70:56,9,0	1/1:3,3:6:13.07:146,13,0	1/1:10,8:18:45.52:466,46,0	1/1:2,2:4:6.85:92,7,0	1/1:1,11:12:36.08:385,36,0	1/1:2,11:13:35.63:327,36,0	1/1:0,2:2:4.26:52,4,0	1/1:3,11:14:36.98:391,37,0	1/1:5,10:15:41.53:513,42,0	1/1:1,7:9:26.72:277,27,0	1/1:2,4:6:18.05:204,18,0
chr10	67120742	.	C	CCT	9598.39	PASS	AC=52;AF=0.963;AN=54;BaseQRankSum=1.554;DP=263;FS=0.000;HRun=0;HaplotypeScore=243.3259;InbreedingCoeff=0.5451;MQ=32.75;MQ0=0;MQRankSum=-1.732;QD=36.78;ReadPosRankSum=0.647;VQSLOD=4.3107;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,0:11:30.02:408,30,0	1/1:6,0:6:14.94:215,15,0	./.	0/0:2,0:2:3.01:0,3,48	1/1:20,0:20:44.99:629,45,0	1/1:8,1:9:23.98:347,24,0	1/1:10,0:10:23.97:334,24,0	1/1:8,1:9:27.08:352,27,0	1/1:13,0:13:32.91:432,33,0	1/1:17,0:17:51:701,51,0	1/1:20,0:20:57.10:786,57,0	1/1:7,0:7:18.03:244,18,0	1/1:10,0:10:21.02:306,21,0	1/1:5,0:5:11.98:145,12,0	1/1:11,0:11:26.97:394,27,0	1/1:7,0:7:21.07:320,21,0	1/1:4,0:4:12.04:184,12,0	1/1:3,0:3:5.88:55,6,0	1/1:6,0:6:18.02:226,18,0	1/1:17,1:18:40.67:502,41,0	1/1:4,0:4:11.93:111,12,0	1/1:11,1:12:36.12:546,36,0	1/1:13,0:13:36.04:491,36,0	1/1:2,0:2:6.02:111,6,0	1/1:14,0:14:32.98:479,33,0	1/1:15,0:15:45:604,45,0	1/1:9,0:9:27.08:391,27,0	1/1:5,1:6:18.06:285,18,0
chr10	67120744	.	T	TA	3756.50	PASS	AB=0.500;AC=50;AF=0.926;AN=54;BaseQRankSum=4.807;DP=285;FS=10.760;HRun=0;HaplotypeScore=285.7301;InbreedingCoeff=0.2656;MQ=32.41;MQ0=0;MQRankSum=1.898;QD=13.27;ReadPosRankSum=5.491;VQSLOD=2.6850;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,10:13:19.76:97,20,0	1/1:1,6:7:15.26:86,15,0	./.	0/0:2,0:2:3.01:0,3,42	1/1:3,20:23:9.05:127,9,0	1/1:1,8:9:21.79:106,22,0	1/1:0,10:10:18.19:139,18,0	1/1:3,8:10:27:331,27,0	1/1:1,12:14:32.17:191,32,0	1/1:3,17:20:55.28:463,55,0	1/1:0,20:20:35.58:130,36,0	1/1:0,7:7:16.77:101,17,0	1/1:1,10:11:10.80:73,11,0	1/1:2,5:7:11.38:97,11,0	1/1:0,11:11:22.27:136,22,0	1/1:1,7:8:18.79:131,19,0	1/1:0,4:4:10.37:41,10,0	0/1:0,3:3:13.15:34,0,13	1/1:0,6:6:17.92:192,18,0	1/1:2,16:18:27.44:188,27,0	1/1:0,4:4:0.19:31,0,0	1/1:2,11:13:30.11:123,30,0	1/1:1,13:14:26.76:131,27,0	0/1:0,2:2:0:27,0,0	1/1:0,14:14:13.12:127,13,0	1/1:1,15:16:44.83:392,45,0	1/1:3,9:12:18.87:145,19,0	1/1:1,5:6:17.59:117,18,0
chr10	67120752	.	CGTT	C	7738.07	PASS	AC=52;AF=0.963;AN=54;BaseQRankSum=2.244;DP=273;FS=0.000;HRun=0;HaplotypeScore=259.5052;InbreedingCoeff=0.4681;MQ=32.55;MQ0=0;MQRankSum=-1.061;QD=28.55;ReadPosRankSum=2.313;VQSLOD=4.5457;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,12:13:32.79:313,33,0	1/1:0,8:8:24.02:279,24,0	./.	0/0:1,1:1:3.01:0,3,70	1/1:0,22:22:47.33:405,47,0	1/1:0,8:8:23.98:219,24,0	1/1:0,9:9:20.94:199,21,0	1/1:0,8:7:21.07:332,21,0	1/1:0,15:15:41.78:452,42,0	1/1:0,20:20:60.17:821,60,0	1/1:0,20:20:56.29:430,56,0	1/1:0,7:7:17.99:177,18,0	1/1:0,11:11:29.94:287,30,0	1/1:0,8:8:24.04:321,24,0	1/1:0,10:10:29.99:293,30,0	1/1:0,8:8:20.75:221,21,0	1/1:0,4:4:11.96:95,12,0	1/1:0,2:2:6.02:87,6,0	1/1:0,5:5:15.05:205,15,0	1/1:0,15:15:44.98:444,45,0	1/1:0,3:3:2.16:33,2,0	1/1:0,12:12:32.86:282,33,0	1/1:0,14:14:41.24:363,41,0	1/1:0,1:1:2.80:13,3,0	1/1:0,14:14:38.93:341,39,0	1/1:0,16:16:45.13:553,45,0	1/1:0,13:13:35.42:415,35,0	1/1:0,5:5:15.03:157,15,0
chr10	67121151	.	T	TG	400.60	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-4.924;DP=643;FS=8.175;HRun=0;HaplotypeScore=67.6930;InbreedingCoeff=0.9980;MQ=70.63;MQ0=0;MQRankSum=-2.160;QD=36.42;ReadPosRankSum=-3.951;VQSLOD=1.4991;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:62,0:62:99:0,184,2541	0/0:11,0:11:33.11:0,33,461	0/0:11,0:11:33.10:0,33,435	0/0:20,0:17:42.11:0,42,544	0/0:23,0:23:66.22:0,66,921	0/0:19,0:19:51.16:0,51,695	0/0:19,0:19:57.17:0,57,763	1/1:0,11:11:33.09:495,33,0	0/0:17,0:17:51.17:0,51,713	0/0:24,0:24:72.20:0,72,977	0/0:19,0:19:51.09:0,51,655	0/0:22,0:22:66.22:0,66,923	0/0:27,0:27:81.24:0,81,1098	0/0:19,0:19:57.17:0,57,778	0/0:15,0:15:45.15:0,45,629	0/0:16,0:16:48.15:0,48,656	0/0:39,0:39:99:0,117,1637	0/0:26,0:26:78.23:0,78,1070	0/0:30,0:30:87.27:0,87,1183	0/0:23,0:23:60.18:0,60,821	0/0:53,0:54:99:0,132,2133	0/0:17,0:17:51.17:0,51,712	0/0:20,0:20:57.19:0,57,794	0/0:26,0:26:78.25:0,78,1075	0/0:11,0:11:27.09:0,27,378	0/0:27,0:27:81.26:0,81,1118	0/0:23,0:23:69.23:0,69,965	0/0:12,0:12:36.12:0,36,503
chr10	67123237	.	AT	A	11068.20	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=5.426;DP=604;FS=6.097;HRun=9;HaplotypeScore=63.1555;InbreedingCoeff=0.9860;MQ=66.64;MQ0=3;MQRankSum=-0.345;QD=22.23;ReadPosRankSum=2.178;VQSLOD=5.8736;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,48:51:99:1126,123,0	1/1:0,6:6:18.01:165,18,0	0/0:18,0:14:31.82:0,32,318	0/0:12,0:11:29.98:0,30,319	1/1:3,27:30:66.01:604,66,0	1/1:2,15:17:42.02:384,42,0	1/1:1,23:24:62.53:576,63,0	1/1:7,23:30:69.01:627,69,0	1/1:0,26:26:75.04:686,75,0	1/1:0,20:20:60.01:541,60,0	1/1:4,20:24:53.94:494,54,0	1/1:2,18:20:54.03:493,54,0	0/0:19,0:19:51.15:0,51,589	1/1:1,21:22:54.03:494,54,0	1/1:2,27:29:75.04:686,75,0	1/1:2,19:21:54.02:494,54,0	1/1:2,19:21:51.03:467,51,0	1/1:4,10:14:24.01:220,24,0	1/1:8,12:20:39:356,39,0	1/1:1,21:22:60.03:549,60,0	1/1:3,19:23:56.06:500,56,0	0/0:16,1:17:20.68:0,21,492	0/0:22,0:22:63.19:0,63,727	0/0:16,0:18:47.81:0,48,514	1/1:2,9:11:24.01:220,24,0	1/1:4,27:31:81.04:741,81,0	1/1:4,21:25:51.02:467,51,0	1/1:2,9:11:9.61:178,10,0
chr10	67124794	.	C	CTAATA	2468.87	PASS	AB=0.606;AC=4;AF=0.077;AN=52;BaseQRankSum=-4.217;DP=801;FS=0.000;HRun=0;HaplotypeScore=88.5354;InbreedingCoeff=0.4585;MQ=34.79;MQ0=127;MQRankSum=-4.238;QD=34.77;ReadPosRankSum=-0.714;VQSLOD=2.8099;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:13,24:30:6.66:1421,0,7	1/1:5,6:6:9.03:274,9,0	./.	./.	0/0:37,0:24:35.65:0,36,714	0/0:37,0:21:30.08:0,30,566	0/0:36,0:18:33.11:0,33,676	0/0:27,0:14:39.13:0,39,793	0/0:33,0:25:42.14:0,42,810	0/0:61,0:33:87.27:0,87,1679	0/0:34,0:23:36.12:0,36,738	0/0:18,0:14:27.09:0,27,542	0/0:26,0:17:21.07:0,21,422	0/0:32,0:21:30.10:0,30,615	0/0:30,0:19:33.10:0,33,629	0/0:29,0:17:18.05:0,18,334	0/1:8,14:20:27.97:881,0,28	0/0:22,0:17:14.91:0,15,308	0/0:18,0:13:39.13:0,39,800	0/0:39,0:26:48.16:0,48,951	0/0:38,0:36:68.92:0,69,1391	0/0:38,0:27:36.12:0,36,737	0/0:25,0:18:33.11:0,33,676	0/0:25,0:24:36.11:0,36,698	0/0:27,0:14:21.04:0,21,386	0/0:37,0:21:60.20:0,60,1193	0/0:49,0:24:57.18:0,57,1095	0/0:12,0:9:9.03:0,9,185
chr10	67125492	.	G	GGATT	262.50	PASS	AB=0.867;AC=5;AF=0.093;AN=54;BaseQRankSum=4.444;DP=562;FS=1.402;HRun=0;HaplotypeScore=81.1486;InbreedingCoeff=0.4294;MQ=51.90;MQ0=22;MQRankSum=-3.402;QD=4.77;ReadPosRankSum=-1.200;VQSLOD=1.8829;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:3,4:5:11.93:239,12,0	./.	0/0:20,0:9:8.97:0,9,391	0/0:27,0:9:15.17:0,15,246	0/0:34,0:32:96.29:0,96,1862	0/0:17,0:17:35.96:0,36,702	0/0:7,0:7:18.06:0,18,359	0/0:44,0:32:96.31:0,96,1867	0/0:20,0:20:55.73:0,56,1048	0/0:27,0:25:75.25:0,75,1464	0/0:30,0:29:78.27:0,78,1522	0/0:16,0:14:42.14:0,42,806	0/0:14,0:13:30.10:0,30,598	0/0:21,0:21:57.20:0,57,1138	0/0:27,0:27:72.21:0,72,1399	0/0:25,0:25:63.22:0,63,1254	0/1:1,2:2:5.22:78,0,5	0/1:12,0:11:54.90:55,0,452	0/0:23,0:21:60.20:0,60,1164	0/0:29,0:26:78.27:0,78,1554	0/0:26,0:26:69.05:0,69,1342	0/1:33,0:33:0.51:1,0,1389	0/0:20,0:19:51.18:0,51,1006	0/0:19,0:19:48.16:0,48,959	0/0:8,0:8:24.08:0,24,476	0/0:18,0:16:48.16:0,48,959	0/0:25,0:25:57.14:0,57,1064	0/0:9,0:9:21.07:0,21,419
chr10	67125499	.	GATC	G	115.93	PASS	AB=0.749;AC=3;AF=0.056;AN=54;BaseQRankSum=3.899;DP=566;FS=6.667;HRun=0;HaplotypeScore=67.4014;InbreedingCoeff=-0.0614;MQ=51.70;MQ0=19;MQRankSum=-1.257;QD=3.13;ReadPosRankSum=-1.070;VQSLOD=0.7836;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:5,4:6:61.52:137,0,62	./.	0/0:16,0:6:10.74:0,11,226	0/1:21,2:9:28.40:28,0,289	0/0:37,0:36:87.28:0,87,2088	0/0:16,0:16:30.07:0,30,739	0/0:9,0:6:15.05:0,15,369	0/0:38,0:28:84.29:0,84,2065	0/0:19,0:19:51.17:0,51,1219	0/0:28,0:26:78.26:0,78,1848	0/0:31,0:30:75.26:0,75,1810	0/0:16,0:15:42.14:0,42,1035	0/0:15,0:14:27.09:0,27,641	0/0:21,0:21:60.19:0,60,1429	0/0:28,0:28:69.24:0,69,1668	0/0:26,0:26:63.22:0,63,1550	0/1:2,2:2:49.75:50,0,64	0/0:11,0:11:24.08:0,24,579	0/0:26,0:23:66.22:0,66,1509	0/0:27,0:26:78.27:0,78,1916	0/0:29,0:25:66.23:0,66,1615	0/0:29,0:29:72.25:0,72,1766	0/0:21,0:19:39.13:0,39,954	0/0:18,0:18:48.15:0,48,1123	0/0:11,0:10:24.08:0,24,591	0/0:18,0:18:54.16:0,54,1234	0/0:27,0:27:54.19:0,54,1330	0/0:11,0:11:21.07:0,21,517
chr10	67131343	.	G	GA	470.98	PASS	AB=0.711;AC=2;AF=0.036;AN=56;BaseQRankSum=6.158;DP=487;FS=1.062;HRun=0;HaplotypeScore=65.8265;InbreedingCoeff=-0.0309;MQ=61.37;MQ0=89;MQRankSum=6.229;QD=18.84;ReadPosRankSum=-2.792;VQSLOD=4.5628;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:10:18.02:0,18,229	0/0:7,0:4:2.99:0,3,42	0/1:6,8:13:41.98:388,0,42	0/1:8,3:5:14:171,0,14	0/0:12,0:9:15.05:0,15,209	0/0:17,0:16:33.11:0,33,461	0/0:21,0:15:42.10:0,42,565	0/0:23,0:14:42.11:0,42,565	0/0:14,0:10:27.09:0,27,377	0/0:18,0:15:42.13:0,42,567	0/0:7,0:5:12.04:0,12,168	0/0:17,0:14:39.09:0,39,522	0/0:17,0:9:24.08:0,24,335	0/0:21,0:14:39.13:0,39,545	0/0:17,0:13:30.10:0,30,414	0/0:12,0:9:27.09:0,27,377	0/0:21,0:14:6:0,6,84	0/0:18,0:12:33.11:0,33,461	0/0:14,0:7:21.04:0,21,270	0/0:11,0:9:21.07:0,21,293	0/0:75,0:49:99:0,114,1531	0/0:6,0:6:9.03:0,9,126	0/0:5,0:2:6.02:0,6,84	0/0:19,0:15:36.12:0,36,503	0/0:15,0:14:36.12:0,36,503	0/0:22,0:18:54.15:0,54,735	0/0:20,0:16:45.15:0,45,629	0/0:11,0:6:15.05:0,15,209
chr10	67132942	.	GTC	G	577.42	PASS	AB=1.000;AC=18;AF=0.346;AN=52;BaseQRankSum=0.193;DP=735;FS=17.659;HRun=0;HaplotypeScore=254.9239;InbreedingCoeff=-0.0917;MQ=29.61;MQ0=72;MQRankSum=-1.789;QD=1.33;ReadPosRankSum=0.220;VQSLOD=0.9956;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:29:2.66:0,3,11	0/1:13,0:12:0.90:7,0,1	1/1:1,0:1:2.98:22,3,0	./.	0/1:26,0:25:0:0,0,0	0/0:19,0:14:0.18:0,0,9	0/1:24,0:17:0:0,0,0	0/1:27,0:21:89.50:89,0,138	0/1:34,0:31:22.69:51,0,23	0/1:57,0:53:99:151,0,328	0/0:21,0:19:2.04:0,2,10	0/0:32,0:29:7.50:0,8,69	0/0:14,7:15:3.97:0,4,151	0/0:24,0:22:11.67:0,12,55	0/1:34,0:28:9.26:9,0,13	0/1:31,0:29:2.76:3,0,39	1/1:28,0:23:25.04:126,25,0	0/1:21,0:19:10.09:10,0,134	0/1:15,0:8:0.02:0,0,81	0/1:38,0:33:33.01:33,0,39	./.	0/0:16,0:15:23.76:0,24,176	0/0:9,2:8:11.67:0,12,88	0/0:33,0:26:16.22:0,16,366	0/0:38,0:33:16.19:0,16,75	0/1:47,0:40:99:114,0,207	0/1:24,0:23:14.33:14,0,68	0/1:15,0:11:22.91:84,0,23
chr10	67132944	.	CTG	C	869.42	PASS	AB=0.922;AC=17;AF=0.327;AN=52;BaseQRankSum=2.204;DP=742;FS=38.714;HRun=0;HaplotypeScore=257.6373;InbreedingCoeff=-0.1701;MQ=29.80;MQ0=71;MQRankSum=-3.595;QD=1.95;ReadPosRankSum=1.130;VQSLOD=1.0139;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,8:25:2.66:0,3,11	0/1:10,3:12:5.45:25,0,5	0/0:2,0:1:0:0,0,0	./.	0/1:24,3:26:0:0,0,0	0/0:16,3:14:0.14:0,0,9	1/1:21,4:18:2.74:15,3,0	0/1:26,3:24:99:116,0,247	0/1:30,5:32:33.43:92,0,33	0/1:55,3:55:99:276,0,512	1/1:20,0:19:0.30:1,0,0	0/0:32,0:31:8.66:0,9,97	0/0:21,0:15:20.26:0,20,329	0/0:23,2:23:14.80:0,15,121	0/1:32,2:29:10.42:10,0,35	0/1:31,0:29:42.50:42,0,50	0/1:19,3:17:9.52:88,0,10	0/1:18,2:18:9.32:9,0,198	0/0:13,2:8:6.01:0,6,77	0/1:37,2:34:4:4,0,53	./.	0/0:16,0:15:24.08:0,24,363	0/0:12,0:9:14.62:0,15,158	0/0:33,0:26:53.46:0,53,779	0/0:37,1:33:16.25:0,16,93	0/1:46,5:44:99:187,0,401	0/1:24,0:23:21.29:56,0,21	0/1:14,1:11:44.97:83,0,45
chr10	67132950	.	GTC	G	999.47	PASS	AB=0.931;AC=21;AF=0.375;AN=56;BaseQRankSum=0.716;DP=781;FS=8.849;HRun=0;HaplotypeScore=267.8905;InbreedingCoeff=-0.2747;MQ=30.22;MQ0=68;MQRankSum=-2.189;QD=1.83;ReadPosRankSum=0.921;VQSLOD=0.9888;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,1:19:2.59:0,3,11	0/1:11,1:11:6.41:6,0,7	0/1:5,0:2:16.96:17,0,18	0/0:3,0:1:3:0,3,26	0/1:18,2:19:0:0,0,0	0/1:14,5:14:1.20:1,0,8	1/1:24,1:18:1.82:5,2,0	0/1:38,1:34:47.56:48,0,303	0/1:35,2:34:61.98:97,0,62	0/1:60,6:63:99:314,0,623	1/1:25,2:25:0.25:1,0,0	0/1:34,0:31:2.21:2,0,152	0/0:19,0:14:10.43:0,10,404	0/0:25,2:26:16.49:0,16,152	0/1:34,2:30:1.53:2,0,101	0/1:28,5:31:81.22:81,0,92	0/1:14,1:9:4.53:69,0,5	0/1:18,1:18:22.20:22,0,167	0/1:21,0:14:27.35:27,0,145	0/1:36,7:37:47.97:57,0,48	0/0:50,0:39:2.94:0,3,47	0/0:19,0:18:33.07:0,33,534	0/0:13,0:10:17.26:0,17,247	0/0:34,0:28:22.11:0,22,928	0/0:40,4:39:16:0,16,91	0/1:53,4:50:99:257,0,518	0/1:21,4:24:71:71,0,85	0/1:14,0:10:60.51:61,0,95
chr10	67132962	.	CTGTG	C	414.76	PASS	AB=0.974;AC=15;AF=0.268;AN=56;BaseQRankSum=5.915;DP=845;FS=18.852;HRun=0;HaplotypeScore=310.2068;InbreedingCoeff=-0.2471;MQ=30.90;MQ0=68;MQRankSum=-3.664;QD=0.86;ReadPosRankSum=0.992;VQSLOD=1.2007;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:22:2.50:0,2,11	0/0:14,0:13:5.34:0,5,22	0/0:13,0:2:6.02:0,6,110	0/0:16,0:1:3.01:0,3,79	0/1:24,0:22:0:0,0,0	0/1:22,0:17:17.61:26,0,18	0/0:25,0:20:0.89:0,1,2	0/1:42,0:37:6.14:6,0,557	0/1:34,2:33:32.37:32,0,89	0/1:63,3:63:99:117,0,1029	1/1:23,3:24:0.40:1,0,0	0/0:34,1:32:0.88:0,1,115	0/0:18,0:14:32.70:0,33,757	0/0:31,0:30:13.99:0,14,160	0/0:36,2:33:2.93:0,3,85	0/1:34,1:33:15.75:16,0,93	0/1:18,0:12:10.94:11,0,106	0/0:20,0:19:40.96:0,41,322	0/1:27,0:19:60.15:60,0,184	0/1:39,0:35:9.87:21,0,10	0/0:50,0:42:2.87:0,3,43	0/0:23,0:22:51.14:0,51,1170	0/0:13,0:10:23.55:0,24,499	0/0:39,0:33:75.17:0,75,1674	0/1:43,2:40:12.37:12,0,24	0/1:59,1:52:99:120,0,634	0/1:27,1:27:31.74:32,0,88	0/1:12,2:10:95.53:96,0,112
chr10	67132966	.	G	GTC	999.40	PASS	AB=0.994;AC=21;AF=0.375;AN=56;BaseQRankSum=3.412;DP=889;FS=2.832;HRun=0;HaplotypeScore=371.3213;InbreedingCoeff=-0.2584;MQ=30.75;MQ0=70;MQRankSum=-3.205;QD=1.58;ReadPosRankSum=-2.497;VQSLOD=0.6775;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:23:0.57:1,0,3	0/0:15,0:14:5.28:0,5,22	0/0:17,0:2:6.02:0,6,86	0/0:21,0:2:3.01:0,3,46	1/1:30,0:28:2.98:11,3,0	0/1:22,0:17:15.71:22,0,16	1/1:24,1:20:2.77:16,3,0	0/1:40,0:34:10.86:11,0,373	0/1:40,2:39:62.44:62,0,92	0/1:70,0:67:99:221,0,633	0/0:32,0:30:5.52:0,6,32	0/1:37,1:35:33.49:39,0,33	0/0:16,0:12:32.96:0,33,477	0/1:31,0:30:17.22:17,0,126	0/1:38,0:33:5.63:14,0,6	0/1:35,0:33:63.48:63,0,131	0/1:21,0:15:5.68:6,0,119	0/1:20,0:19:15.96:16,0,234	0/1:29,0:23:99:159,0,105	0/0:39,0:35:5.56:0,6,75	1/1:51,0:43:1.50:6,2,0	0/0:22,0:21:51.14:0,51,750	0/0:12,0:9:23.55:0,24,306	0/0:37,0:31:75.17:0,75,1068	0/0:46,0:41:0.64:0,1,67	0/1:63,1:57:99:269,0,286	0/1:31,0:30:58.36:85,0,58	0/1:17,0:13:55.60:131,0,56
chr10	67132970	.	GTC	G	1049.35	PASS	AB=0.946;AC=17;AF=0.304;AN=56;BaseQRankSum=2.130;DP=887;FS=2.976;HRun=0;HaplotypeScore=310.5801;InbreedingCoeff=-0.2134;MQ=30.83;MQ0=71;MQRankSum=-1.340;QD=1.87;ReadPosRankSum=-4.827;VQSLOD=1.4393;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:21:1.72:0,2,9	0/0:15,0:14:7.99:0,8,36	0/0:22,0:2:6.02:0,6,107	0/0:24,0:2:6:0,6,81	0/0:28,1:27:0.81:0,1,3	0/1:20,2:17:13.66:14,0,40	1/1:23,1:19:2.90:16,3,0	0/1:29,8:31:99:294,0,353	0/1:41,1:39:37.31:37,0,136	0/1:64,5:66:99:315,0,580	0/0:33,0:32:1.76:0,2,5	0/1:38,0:35:16.36:16,0,52	0/0:16,0:12:23.68:0,24,551	0/1:30,2:31:2.13:2,0,128	0/1:36,2:33:7.45:23,0,7	0/1:34,0:32:10.43:10,0,131	0/1:20,0:16:30.83:31,0,67	0/1:19,1:19:64.62:93,0,65	0/1:28,2:24:85.36:85,0,233	0/1:36,3:36:0.46:0,0,41	1/1:50,0:42:1.82:6,2,0	0/0:20,0:19:51.17:0,51,962	0/0:12,0:9:24.08:0,24,433	0/0:36,0:30:75.24:0,75,1370	0/0:45,1:41:3.63:0,4,92	0/1:61,4:59:99:246,0,273	0/0:31,0:30:2.18:0,2,133	0/0:17,0:13:4.25:0,4,84
chr10	67132974	.	G	GTA	2700.55	PASS	AB=0.820;AC=20;AF=0.357;AN=56;BaseQRankSum=2.275;DP=913;FS=16.591;HRun=0;HaplotypeScore=318.4575;InbreedingCoeff=-0.2757;MQ=31.52;MQ0=68;MQRankSum=-2.143;QD=4.09;ReadPosRankSum=-2.321;VQSLOD=1.2594;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:22:3.50:12,0,4	0/0:15,0:14:5.49:0,5,25	0/0:25,0:3:8.99:0,9,112	0/0:27,0:4:9.03:0,9,135	0/1:27,1:27:0.12:0,0,0	0/1:18,4:17:13.65:14,0,47	1/1:15,10:19:2.87:51,3,0	0/1:41,0:37:99:107,0,497	0/1:28,14:40:77.42:77,0,167	0/1:60,9:66:99:626,0,994	0/0:32,3:34:2.89:0,3,11	0/1:29,9:35:51.11:156,0,51	0/0:17,0:13:33.85:0,34,485	0/1:16,16:32:92.58:93,0,100	0/1:25,14:34:11.56:110,0,12	0/1:25,10:33:89.94:90,0,223	0/0:21,0:17:20.16:0,20,216	0/1:16,3:19:99:194,0,190	0/1:23,6:25:99:187,0,406	0/0:38,1:36:3.44:0,3,49	1/1:14,35:42:2.94:58,3,0	0/0:23,0:22:57.18:0,57,849	0/0:13,0:10:25.90:0,26,372	0/0:38,0:32:78.26:0,78,1187	0/1:30,16:43:34.78:35,0,83	0/1:41,22:59:99:726,0,592	0/1:21,11:31:99:168,0,213	0/1:13,3:13:99:152,0,123
chr10	67132976	.	GTC	G	1452.96	PASS	AB=0.966;AC=23;AF=0.411;AN=56;BaseQRankSum=2.447;DP=909;FS=9.683;HRun=0;HaplotypeScore=316.4156;InbreedingCoeff=-0.3131;MQ=31.94;MQ0=71;MQRankSum=-4.307;QD=2.03;ReadPosRankSum=-2.858;VQSLOD=0.7596;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:27,1:23:0.01:0,0,0	0/0:12,0:11:4.97:0,5,18	0/0:26,0:3:9.03:0,9,158	0/0:28,0:4:12.02:0,12,191	1/1:23,4:26:1.26:21,1,0	0/1:20,2:17:30.12:30,0,60	1/1:24,1:20:11.94:101,12,0	0/1:40,1:37:99:134,0,471	0/1:40,3:40:29.41:29,0,58	0/1:61,6:64:99:420,0,963	0/0:31,4:34:1.29:0,1,5	0/1:37,1:35:42.42:72,0,42	0/0:17,0:13:29.72:0,30,612	0/1:33,0:32:46.27:46,0,67	0/1:36,2:33:11.13:11,0,12	0/1:35,0:33:21.86:22,0,149	0/1:20,1:17:50.76:51,0,123	0/1:17,2:18:54.33:171,0,54	0/1:29,0:25:99:110,0,441	0/1:38,1:36:29.83:32,0,30	1/1:51,0:43:2:7,2,0	0/0:23,0:21:60.19:0,60,1112	0/0:14,0:11:33.08:0,33,538	0/0:40,0:34:64.29:0,64,1526	0/1:47,1:43:44.22:44,0,68	0/1:61,2:58:99:238,0,559	0/1:32,0:31:46.77:47,0,171	0/1:15,0:12:21.52:22,0,116
chr10	67132980	.	GTGTC	G	125.55	PASS	AB=0.994;AC=13;AF=0.232;AN=56;BaseQRankSum=8.210;DP=908;FS=25.767;HRun=0;HaplotypeScore=332.8442;InbreedingCoeff=-0.1038;MQ=32.43;MQ0=68;MQRankSum=-4.692;QD=0.35;ReadPosRankSum=1.227;VQSLOD=1.1874;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:25:0.12:0,0,1	1/1:11,0:10:0.96:2,1,0	0/0:27,0:4:9.03:0,9,183	0/0:31,0:4:12.04:0,12,260	0/0:25,0:24:3.60:0,4,41	0/0:21,1:17:1.81:0,2,108	0/0:27,0:22:17.99:0,18,197	0/0:38,0:34:59.13:0,59,668	0/1:41,0:39:22.38:22,0,76	0/1:64,2:63:59.92:60,0,938	1/1:35,0:34:1.17:3,1,0	0/0:38,0:35:8.06:0,8,165	0/0:18,0:14:22.15:0,22,871	0/1:32,0:31:34.97:35,0,104	0/0:36,0:32:4.11:0,4,127	0/1:35,0:33:11.59:12,0,141	0/1:20,0:16:23.06:57,0,23	0/1:17,0:16:5.22:5,0,283	0/0:29,0:25:17.08:0,17,440	0/1:38,0:35:30.46:30,0,41	0/0:56,0:48:14.89:0,15,191	0/0:22,0:20:60.20:0,60,1468	0/0:15,0:12:36.12:0,36,754	0/0:41,0:36:64.35:0,64,2115	0/1:47,1:43:9.85:10,0,46	0/0:62,1:59:0.05:0,0,1011	0/0:32,0:31:23.40:0,23,204	0/1:15,0:12:20.19:20,0,109
chr10	67132984	.	C	CTG	53.45	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=7.130;DP=903;FS=11.016;HRun=0;HaplotypeScore=317.6778;InbreedingCoeff=0.1387;MQ=33.41;MQ0=64;MQRankSum=-3.536;QD=0.24;ReadPosRankSum=-0.680;VQSLOD=0.7395;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:28,1:25:0.08:0,0,0	0/0:9,1:9:2.69:0,3,11	0/0:28,0:4:9:0,9,101	0/0:38,0:6:14.73:0,15,195	0/0:25,0:25:0.30:0,0,35	0/0:23,0:19:3.24:0,3,76	0/0:27,1:23:18.52:0,19,218	0/0:39,0:35:79.99:0,80,775	0/1:41,0:39:5.94:6,0,38	0/0:62,0:59:71.22:0,71,830	0/0:31,0:30:2.19:0,2,8	0/0:35,0:32:12.96:0,13,167	0/0:18,0:15:35.99:0,36,478	0/1:31,0:30:19.34:19,0,53	0/0:36,1:33:3.70:0,4,46	0/1:36,0:34:13.87:14,0,91	1/1:20,1:17:14.28:122,14,0	0/0:15,0:15:9.10:0,9,163	0/0:26,0:23:21.63:0,22,304	0/1:31,0:29:1.92:2,0,76	0/0:62,0:54:23.94:0,24,234	0/0:25,0:23:69.20:0,69,879	0/0:16,0:13:39.13:0,39,517	0/0:42,0:39:67.31:0,67,1112	0/0:45,0:41:17.01:0,17,93	0/0:57,1:55:7.43:0,7,596	0/1:33,0:32:7.01:7,0,110	0/0:15,0:12:7.27:0,7,57
chr10	67133291	.	TC	T	2596.20	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=11.510;DP=647;FS=0.929;HRun=5;HaplotypeScore=110.8619;InbreedingCoeff=0.9772;MQ=77.10;MQ0=0;MQRankSum=-0.634;QD=29.50;ReadPosRankSum=4.707;VQSLOD=3.1179;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,34:36:81.25:972,81,0	1/1:0,3:3:9.03:108,9,0	0/0:24,0:23:48.50:0,49,825	0/0:11,0:11:33.06:0,33,410	0/0:16,0:16:36.10:0,36,485	0/0:18,0:18:54.18:0,54,756	0/0:29,0:29:87.29:0,87,1218	0/0:30,0:30:87.28:0,87,1202	0/0:31,0:31:87.29:0,87,1216	0/0:26,0:26:72.21:0,72,965	0/0:17,0:17:38.88:0,39,544	0/0:28,0:28:84.25:0,84,1140	0/0:19,1:20:24.20:0,24,737	0/0:24,0:24:66.20:0,66,893	0/0:17,0:17:51.17:0,51,713	0/0:16,0:16:42.14:0,42,588	1/1:1,48:49:99:1654,138,0	0/0:30,0:29:84.28:0,84,1175	0/0:28,0:27:75.21:0,75,991	0/0:18,0:17:33.06:0,33,423	0/0:42,0:42:99:0,111,1513	0/0:18,0:18:54.18:0,54,742	0/0:16,0:16:45.14:0,45,611	0/0:28,0:28:78.25:0,78,1076	0/0:19,0:19:42.13:0,42,560	0/0:26,0:26:69.20:0,69,919	0/0:18,0:18:45.14:0,45,613	0/0:9,0:9:24.08:0,24,336
chr10	67134385	.	T	TGAGC	3658.50	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-6.994;DP=571;FS=5.617;HRun=0;HaplotypeScore=92.9724;InbreedingCoeff=0.9695;MQ=55.93;MQ0=11;MQRankSum=0.137;QD=44.08;ReadPosRankSum=3.360;VQSLOD=3.9305;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,32:46:66.23:1757,66,0	1/1:2,10:11:9.04:467,9,0	0/0:11,0:5:15.05:0,15,271	0/0:9,0:8:18.47:0,18,252	0/0:24,0:24:54.14:0,54,971	0/0:12,0:12:36.12:0,36,663	0/0:30,0:28:72.22:0,72,1212	0/0:26,0:23:54.18:0,54,985	0/0:28,0:28:78.27:0,78,1456	0/0:19,0:19:54.14:0,54,972	0/0:22,0:22:54.14:0,54,971	0/0:21,0:21:60.18:0,60,1058	0/0:15,0:15:42.14:0,42,784	0/0:18,0:18:54.19:0,54,989	0/0:9,0:9:27.09:0,27,504	0/0:11,0:11:27.08:0,27,473	1/1:4,21:24:54.19:1434,54,0	0/0:26,0:26:75.26:0,75,1389	0/0:25,0:23:66.16:0,66,1137	0/0:27,0:27:69.24:0,69,1270	0/0:26,0:26:78.24:0,78,1381	0/0:14,0:14:33.11:0,33,608	0/0:22,0:22:41.72:0,42,782	0/0:25,0:25:72.25:0,72,1333	0/0:13,0:13:39.13:0,39,717	0/0:27,0:26:75.17:0,75,1315	0/0:19,0:18:57.11:0,57,984	0/0:9,0:9:27.09:0,27,504
chr10	67137394	.	T	TC	1193.92	PASS	AB=1.000;AC=10;AF=0.179;AN=56;BaseQRankSum=5.129;DP=528;FS=4.397;HRun=9;HaplotypeScore=70.0428;InbreedingCoeff=0.7474;MQ=89.77;MQ0=4;MQRankSum=0.032;QD=8.53;ReadPosRankSum=-2.712;VQSLOD=1.5144;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:6,27:33:36.70:425,37,0	1/1:1,4:5:6.01:62,6,0	0/0:55,0:36:37.96:0,38,406	0/1:40,0:33:12.19:12,0,209	0/1:20,0:20:8.94:118,0,9	0/0:14,0:14:23.14:0,23,248	0/0:18,0:18:43.67:0,44,405	1/1:8,17:25:50.67:478,51,0	0/0:13,0:13:26.82:0,27,222	0/0:15,0:15:32.98:0,33,286	0/0:15,0:15:44.97:0,45,384	0/0:12,0:12:35.97:0,36,307	0/0:12,0:12:35.98:0,36,309	0/0:21,0:21:50.20:0,50,485	0/0:17,0:17:50.95:0,51,434	0/0:14,0:14:41.99:0,42,364	1/1:3,14:17:24.06:263,24,0	0/0:11,0:11:29.99:0,30,260	0/0:18,0:18:44.87:0,45,376	0/0:23,0:23:50.34:0,50,474	0/0:14,0:14:32.94:0,33,279	0/0:9,0:9:23.97:0,24,203	0/0:20,0:21:27.15:0,27,318	0/0:26,0:26:50.11:0,50,470	0/0:19,0:19:53.94:0,54,455	0/0:18,0:18:36.11:0,36,417	0/0:8,0:8:24:0,24,208	0/0:15,0:15:41.99:0,42,364
chr10	67137403	.	C	CA	591.51	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=3.932;DP=548;FS=0.000;HRun=8;HaplotypeScore=73.4540;InbreedingCoeff=0.5408;MQ=89.48;MQ0=4;MQRankSum=-0.708;QD=5.86;ReadPosRankSum=0.198;VQSLOD=0.3007;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:36,0:36:35.82:36,0,61	0/1:6,0:6:3.60:4,0,5	0/0:55,0:36:51.64:0,52,383	0/0:39,1:32:9.79:0,10,275	1/1:3,19:23:56.87:587,57,0	0/0:12,0:12:12.21:0,12,228	0/0:18,1:19:19.69:0,20,427	0/1:19,0:19:12.82:54,0,13	0/0:12,0:13:38:0,38,316	0/0:17,0:17:38.33:0,38,375	0/0:18,0:18:50.89:0,51,436	0/0:14,0:14:38.99:0,39,348	0/0:13,0:13:35.94:0,36,317	0/0:19,1:20:25.77:0,26,486	0/0:18,0:18:45:0,45,403	0/0:14,0:14:42.02:0,42,383	1/1:17,0:17:8.90:44,9,0	0/0:16,0:16:41.85:0,42,354	0/0:20,0:20:44.96:0,45,396	0/0:21,1:22:25.94:0,26,478	0/0:17,0:17:41.96:0,42,363	0/0:9,0:9:20.96:0,21,183	0/0:21,0:21:49.36:0,49,393	0/0:24,1:25:28.66:0,29,489	0/0:18,0:18:45.02:0,45,409	0/0:19,0:19:48.01:0,48,433	0/0:9,0:9:26.97:0,27,233	0/0:17,0:17:47.98:0,48,426
chr10	67140668	.	TA	T	616.67	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.077;DP=452;FS=2.863;HRun=12;HaplotypeScore=53.2623;InbreedingCoeff=0.7995;MQ=78.56;MQ0=0;MQRankSum=-0.023;QD=13.70;ReadPosRankSum=-1.328;VQSLOD=3.4611;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:3,0:17:31.25:0,31,158	0/0:2,0:7:14.20:0,14,72	0/0:22,3:18:8.22:0,8,155	0/0:20,0:15:6.43:0,6,142	1/1:5,16:21:41.72:320,42,0	0/0:15,0:15:39.08:0,39,396	0/0:9,0:9:24.05:0,24,242	1/1:6,18:24:53.75:418,54,0	0/0:17,0:17:39.08:0,39,396	0/0:24,1:25:39.92:0,40,585	0/0:17,0:17:39.08:0,39,396	0/0:10,1:11:4.37:0,4,221	0/0:12,0:12:35.86:0,36,348	0/0:15,0:15:39.08:0,39,396	0/0:17,2:20:7.48:0,7,425	0/0:16,0:16:39.06:0,39,385	0/0:0,0:18:42.61:0,43,216	0/0:15,1:16:12.84:0,13,312	0/0:21,2:24:26:0,26,445	0/0:16,0:17:47.92:0,48,465	0/0:7,0:8:20.88:0,21,197	0/0:16,0:17:38.91:0,39,379	0/0:13,0:13:30.06:0,30,304	0/0:15,1:16:18.89:0,19,372	0/0:16,0:16:19.16:0,19,373	0/0:15,0:15:30.06:0,30,305	0/0:14,0:14:36.06:0,36,356	0/0:7,0:7:15.01:0,15,145
chr10	67141224	.	CGTGTGTGT	C	5987.81	PASS	AB=0.625;AC=37;AF=0.740;AN=50;BaseQRankSum=8.916;DP=656;FS=23.262;HRun=0;HaplotypeScore=166.1603;InbreedingCoeff=0.7614;MQ=55.26;MQ0=9;MQRankSum=-8.942;QD=13.93;ReadPosRankSum=-0.040;VQSLOD=2.6021;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:41:18.06:289,18,0	1/1:11,0:17:18.06:335,18,0	./.	./.	0/0:21,0:19:20.58:0,21,697	1/1:14,3:18:8.98:145,9,0	1/1:26,8:34:24.08:583,24,0	0/0:16,0:17:9.01:0,9,237	1/1:21,11:32:27.09:679,27,0	1/1:16,4:20:8.98:120,9,0	0/1:6,8:15:8.05:89,0,8	1/1:16,5:22:12.04:253,12,0	0/0:25,0:25:57.18:0,57,1713	1/1:10,13:23:18.06:428,18,0	1/1:11,9:21:23.97:524,24,0	1/1:11,12:25:33:750,33,0	1/1:15,0:22:6.02:112,6,0	1/1:11,4:15:12.04:302,12,0	1/1:10,4:14:6.02:122,6,0	1/1:14,8:22:6.02:126,6,0	1/1:30,0:30:6.02:91,6,0	0/0:13,0:24:8.94:0,9,341	0/0:17,0:17:27.09:0,27,948	0/0:47,0:48:90.29:0,90,2855	1/1:15,6:20:12.04:250,12,0	1/1:11,5:16:15.02:305,15,0	1/1:13,7:20:20.47:485,20,0	./.
chr10	67142097	.	GA	G	435.09	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.491;DP=672;FS=4.181;HRun=7;HaplotypeScore=76.7335;InbreedingCoeff=0.9909;MQ=81.15;MQ0=1;MQRankSum=1.826;QD=19.78;ReadPosRankSum=-4.034;VQSLOD=2.4195;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,102,1253	0/0:13,0:13:36.07:0,36,419	0/0:40,0:36:57.13:0,57,740	0/0:36,0:33:28.75:0,29,431	0/0:20,0:20:48.14:0,48,586	0/0:25,0:25:75.22:0,75,920	0/0:25,0:25:72.14:0,72,820	1/1:3,19:22:54.07:530,54,0	0/0:20,0:20:48.14:0,48,584	0/0:25,0:25:57.16:0,57,687	0/0:21,0:21:60.14:0,60,696	0/0:25,0:25:69.19:0,69,823	0/0:19,0:19:51.13:0,51,599	0/0:22,0:22:51.06:0,51,601	0/0:26,0:26:72.21:0,72,882	0/0:11,0:11:33.10:0,33,411	0/0:36,0:36:99:0,102,1256	0/0:18,0:18:54.15:0,54,658	0/0:16,0:16:48.14:0,48,577	0/0:29,0:29:78.22:0,78,946	0/0:22,0:22:60.18:0,60,733	0/0:23,0:23:63.19:0,63,772	0/0:18,0:18:42.12:0,42,510	0/0:36,0:36:99:0,99,1187	0/0:22,0:22:57.16:0,57,685	0/0:25,0:25:62.66:0,63,724	0/0:32,0:32:90.27:0,90,1106	0/0:6,0:6:18.06:0,18,224
chr10	67144530	.	TAC	T	258.44	PASS	AB=0.899;AC=17;AF=0.315;AN=54;BaseQRankSum=5.500;DP=460;FS=7.738;HRun=0;HaplotypeScore=59.6106;InbreedingCoeff=-0.1339;MQ=66.44;MQ0=8;MQRankSum=-1.745;QD=1.19;ReadPosRankSum=0.861;VQSLOD=0.4561;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:29:8.17:37,8,0	1/1:3,0:4:2.84:14,3,0	./.	0/0:38,0:18:3.01:0,3,45	0/0:12,0:15:14.63:0,15,99	0/1:11,2:13:14.94:57,0,15	0/1:18,0:18:11.76:12,0,248	0/0:21,0:20:15.38:0,15,120	0/1:13,1:14:20.73:21,0,120	0/0:8,0:8:9.03:0,9,134	0/1:15,2:17:20.79:21,0,121	0/0:14,0:14:10.28:0,10,137	0/1:10,1:11:17.79:18,0,161	0/1:9,1:10:17.79:18,0,164	0/1:6,1:7:26.82:27,0,39	0/1:11,1:12:14.80:15,0,184	1/1:19,0:24:10.42:44,10,0	0/0:23,1:30:0.16:0,0,293	0/0:10,0:10:9.03:0,9,133	0/1:4,2:6:26.83:27,0,38	0/0:24,0:23:3.01:0,3,45	0/0:16,0:17:9.94:0,10,277	0/0:8,0:8:5.61:0,6,55	0/1:27,2:29:61.15:61,0,532	0/1:20,2:22:41.46:41,0,183	0/0:15,0:14:15.05:0,15,208	0/0:10,0:10:3.01:0,3,45	0/0:1,0:1:3.01:0,3,42
chr10	67144599	.	TC	T	2137.79	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.451;DP=616;FS=22.148;HRun=5;HaplotypeScore=71.7590;InbreedingCoeff=0.9938;MQ=88.30;MQ0=0;MQRankSum=-3.133;QD=27.06;ReadPosRankSum=2.221;VQSLOD=1.9941;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,38:41:93.26:1054,93,0	1/1:0,5:5:15.04:170,15,0	0/0:39,0:39:93.31:0,93,1256	0/0:33,0:31:75.20:0,75,996	0/0:21,0:21:54.18:0,54,738	0/0:9,0:9:27.08:0,27,347	0/0:33,0:33:96.32:0,96,1311	0/0:19,0:19:48.15:0,48,636	0/0:15,0:15:42.14:0,42,574	0/0:24,0:24:63.21:0,63,859	0/0:16,0:16:39.10:0,39,494	0/0:22,0:22:63.21:0,63,862	0/0:14,0:14:39.13:0,39,533	0/0:26,0:26:75.25:0,75,1024	0/0:22,0:22:60.18:0,60,789	0/0:17,0:17:48.16:0,48,654	1/1:1,32:33:93.27:1054,93,0	0/0:25,0:25:60.18:0,60,803	0/0:20,0:20:51.15:0,51,677	0/0:17,0:17:45.15:0,45,615	0/0:33,0:33:90.28:0,90,1213	0/0:16,0:16:45.14:0,45,593	0/0:14,0:14:42.12:0,42,552	0/0:31,0:31:84.28:0,84,1145	0/0:15,0:15:36.10:0,36,460	0/0:18,0:18:48.15:0,48,635	0/0:23,0:23:69.21:0,69,919	0/0:15,0:15:42.14:0,42,575
chr10	67146029	.	C	CT	11141.29	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=19.165;DP=681;FS=2.818;HRun=0;HaplotypeScore=136.2355;InbreedingCoeff=0.9995;MQ=93.58;MQ0=2;MQRankSum=-4.709;QD=28.57;ReadPosRankSum=2.867;VQSLOD=4.8592;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,138,1893	0/0:12,0:12:36.12:0,36,503	0/0:30,0:30:90.29:0,90,1230	0/0:33,0:33:77.04:0,77,1112	0/0:24,0:24:63.19:0,63,863	1/1:1,16:17:48.09:513,48,0	1/1:4,25:29:80.97:837,81,0	0/0:22,0:22:57.19:0,57,798	1/1:4,22:26:77.60:720,78,0	1/1:2,18:19:57.08:651,57,0	1/1:2,8:9:24.06:273,24,0	1/1:6,18:24:67.94:685,68,0	0/0:32,0:32:96.32:0,96,1340	1/1:1,23:24:71.72:680,72,0	1/1:4,34:37:99:1114,111,0	1/1:1,19:20:59.81:635,60,0	0/0:28,0:28:81.24:0,81,1098	1/1:3,25:28:72.14:779,72,0	1/1:3,12:15:42.03:448,42,0	1/1:1,16:20:50.03:491,50,0	1/1:7,44:48:99:1294,122,0	0/0:17,0:17:51.17:0,51,713	0/0:14,0:14:42.14:0,42,587	0/0:31,0:31:93.27:0,93,1275	1/1:2,13:15:42.03:449,42,0	1/1:2,16:18:53.97:552,54,0	1/1:1,24:25:75.01:753,75,0	1/1:5,4:9:27:266,27,0
chr10	67146030	.	AGC	A	10689.68	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=20.689;DP=674;FS=3.763;HRun=0;HaplotypeScore=147.7168;InbreedingCoeff=0.9984;MQ=93.40;MQ0=2;MQRankSum=-7.060;QD=27.98;ReadPosRankSum=4.963;VQSLOD=6.3889;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,138,2703	0/0:12,0:12:36.12:0,36,726	0/0:29,0:29:87.30:0,87,1721	0/0:33,0:33:86.93:0,87,1595	0/0:25,0:25:69.22:0,69,1328	1/1:1,16:17:48.10:528,48,0	1/1:3,25:28:75.02:790,75,0	0/0:23,0:23:66.21:0,66,1253	1/1:3,22:25:73.39:697,73,0	1/1:1,18:18:51.09:590,51,0	1/1:2,8:9:21.05:233,21,0	1/1:6,19:25:68.47:652,68,0	0/0:32,0:32:96.31:0,96,1892	1/1:1,23:24:70.23:674,70,0	1/1:2,34:36:99:1123,108,0	1/1:1,19:20:59.99:656,60,0	0/0:27,0:27:81.28:0,81,1615	1/1:2,25:27:70.40:777,70,0	1/1:2,12:14:36.04:385,36,0	1/1:4,16:20:46.37:447,46,0	1/1:5,45:48:99:1287,117,0	0/0:17,0:17:51.18:0,51,1035	0/0:15,0:15:45.14:0,45,858	0/0:32,0:32:96.27:0,96,1831	1/1:1,13:14:39.05:436,39,0	1/1:2,16:18:46.98:495,47,0	1/1:0,24:24:72.06:751,72,0	1/1:5,4:9:19.08:167,19,0
chr10	67148886	.	AACAC	A	1617.47	PASS	AB=1.000;AC=10;AF=0.185;AN=54;BaseQRankSum=6.677;DP=500;FS=4.357;HRun=0;HaplotypeScore=97.6620;InbreedingCoeff=0.6998;MQ=55.15;MQ0=13;MQRankSum=3.292;QD=15.26;ReadPosRankSum=2.624;VQSLOD=2.8567;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,21:34:48.12:750,48,0	1/1:2,3:5:9.03:146,9,0	0/0:30,0:15:3.01:0,3,70	0/0:30,0:15:21.54:0,22,419	./.	0/1:13,0:13:0:0,0,0	0/0:28,0:26:21.97:0,22,336	1/1:12,0:20:15.02:139,15,0	0/0:11,0:11:9.03:0,9,175	0/0:23,0:23:34.91:0,35,558	0/1:11,0:11:0.19:0,0,0	0/0:19,0:18:9.50:0,10,187	0/0:12,0:12:21.04:0,21,389	0/0:11,0:11:5.99:0,6,49	0/0:18,0:16:5.99:0,6,67	0/0:11,0:11:14.85:0,15,218	1/1:7,15:22:45.15:730,45,0	0/0:11,0:11:12.04:0,12,220	0/0:21,0:20:36.10:0,36,573	0/0:7,0:7:6.02:0,6,96	0/0:23,0:26:11.79:0,12,204	0/0:10,0:10:27.06:0,27,515	0/0:9,0:10:15.05:0,15,355	0/0:30,1:34:14.31:0,14,1311	0/0:18,0:18:1.86:0,2,49	0/0:21,0:21:42.06:0,42,632	0/0:11,0:9:9:0,9,111	0/0:11,0:11:15.05:0,15,253
chr10	67149753	.	TG	T	464.70	PASS	AB=0.651;AC=5;AF=0.089;AN=56;BaseQRankSum=11.415;DP=669;FS=11.727;HRun=1;HaplotypeScore=115.3106;InbreedingCoeff=0.3403;MQ=87.60;MQ0=0;MQRankSum=-10.980;QD=6.04;ReadPosRankSum=-0.766;VQSLOD=-0.7120;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:10,20:30:46.40:209,0,46	1/1:1,9:10:26.51:134,27,0	0/0:30,0:30:90.24:0,90,1348	0/0:27,0:26:71.72:0,72,1085	0/0:22,0:22:66.22:0,66,1050	0/0:23,0:22:66.23:0,66,1055	0/0:10,0:10:30.10:0,30,480	0/1:13,13:26:99:195,0,138	0/0:19,0:19:57.19:0,57,907	0/0:33,0:33:99:0,99,1540	0/0:18,0:18:51.17:0,51,805	0/0:27,0:27:81.26:0,81,1266	0/0:28,0:28:84.27:0,84,1320	0/0:26,0:26:78.27:0,78,1243	0/0:33,0:33:96.31:0,96,1506	0/0:26,0:26:78.24:0,78,1203	0/1:6,5:11:41.51:50,0,42	0/0:30,0:30:90.29:0,90,1405	0/0:27,0:27:81.26:0,81,1252	0/0:21,0:21:62.88:0,63,970	0/0:34,0:34:99:0,102,1625	0/0:21,0:21:63.21:0,63,1004	0/0:26,0:26:78.25:0,78,1220	0/0:16,0:16:48.16:0,48,767	0/0:26,0:26:78.26:0,78,1223	0/0:23,0:23:69.24:0,69,1104	0/0:33,0:33:99:0,99,1580	0/0:13,0:13:39.13:0,39,620
chr10	67149755	.	ACCTCTG	A	1958.82	PASS	AB=0.657;AC=5;AF=0.089;AN=56;BaseQRankSum=11.358;DP=668;FS=5.208;HRun=0;HaplotypeScore=179.9930;InbreedingCoeff=0.3557;MQ=87.58;MQ0=0;MQRankSum=-10.743;QD=25.44;ReadPosRankSum=-0.547;VQSLOD=3.1713;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:10,20:30:37.90:785,0,38	1/1:1,9:10:12.21:428,12,0	0/0:30,0:30:90.29:0,90,2892	0/0:27,0:26:72.58:0,73,2373	0/0:22,0:22:66.21:0,66,2253	0/0:23,0:22:66.21:0,66,2395	0/0:10,0:10:30.09:0,30,1042	0/1:11,13:24:99:597,0,125	0/0:19,0:19:57.18:0,57,2024	0/0:32,0:32:93.21:0,93,3355	0/0:18,0:18:51.15:0,51,1830	0/0:29,0:29:87.28:0,87,3034	0/0:29,0:29:87.30:0,87,2987	0/0:26,0:26:78.27:0,78,2849	0/0:31,0:31:93.32:0,93,3258	0/0:27,0:27:81.26:0,81,2769	0/1:8,5:13:9.53:268,0,10	0/0:29,0:29:87.30:0,87,3273	0/0:25,0:25:75.26:0,75,2526	0/0:21,0:21:63.20:0,63,2132	0/0:34,0:34:99:0,102,3651	0/0:21,0:21:63.21:0,63,2242	0/0:26,0:26:78.23:0,78,2766	0/0:16,0:16:48.16:0,48,1732	0/0:27,0:27:81.28:0,81,2849	0/0:23,0:23:69.24:0,69,2596	0/0:33,0:33:99:0,99,3587	0/0:13,0:13:39.12:0,39,1379
chr10	67150213	.	AG	A	2633.87	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=13.079;DP=591;FS=13.281;HRun=1;HaplotypeScore=63.7068;InbreedingCoeff=0.9995;MQ=85.15;MQ0=0;MQRankSum=-4.981;QD=31.36;ReadPosRankSum=4.644;VQSLOD=2.0252;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,39:42:99:1475,120,0	1/1:0,11:11:33.10:409,33,0	0/0:24,0:24:72.20:0,72,1080	0/0:17,0:17:48.09:0,48,698	0/0:17,0:17:51.17:0,51,808	0/0:15,0:15:45.14:0,45,693	0/0:26,0:26:78.27:0,78,1247	0/0:26,0:26:78.27:0,78,1246	0/0:20,0:20:60.20:0,60,952	0/0:27,0:27:78.27:0,78,1248	0/0:13,0:13:39.13:0,39,623	0/0:32,0:32:96.31:0,96,1506	0/0:19,0:19:57.19:0,57,908	0/0:17,0:17:48.16:0,48,767	0/0:20,0:20:60.19:0,60,936	0/0:9,0:9:27.09:0,27,432	1/1:2,29:31:72.23:893,72,0	0/0:18,0:18:54.18:0,54,854	0/0:23,0:23:69.21:0,69,1036	0/0:22,0:22:66.22:0,66,1047	0/0:25,0:25:72.25:0,72,1148	0/0:19,0:19:57.19:0,57,911	0/0:14,0:14:42.14:0,42,666	0/0:24,0:24:72.23:0,72,1127	0/0:14,0:14:42.14:0,42,671	0/0:24,0:24:72.22:0,72,1107	0/0:28,0:28:84.26:0,84,1296	0/0:14,0:14:42.14:0,42,670
chr10	67150443	.	AAC	A	438.84	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.128;DP=720;FS=5.277;HRun=0;HaplotypeScore=83.1511;InbreedingCoeff=0.9947;MQ=85.28;MQ0=0;MQRankSum=-1.445;QD=27.43;ReadPosRankSum=-1.895;VQSLOD=3.8889;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,123,2170	0/0:7,0:7:21.07:0,21,375	0/0:28,0:28:81.26:0,81,1394	0/0:19,0:18:27.47:0,27,676	1/1:1,15:16:42.05:534,42,0	0/0:13,0:13:36.11:0,36,618	0/0:34,0:34:96.29:0,96,1652	0/0:24,0:24:63.20:0,63,1073	0/0:30,0:30:90.31:0,90,1603	0/0:26,0:26:78.25:0,78,1359	0/0:13,0:13:39.13:0,39,694	0/0:39,0:39:99:0,108,1893	0/0:30,0:30:84.29:0,84,1501	0/0:28,0:28:81.25:0,81,1399	0/0:25,0:25:75.26:0,75,1336	0/0:19,0:19:54.19:0,54,972	0/0:41,0:41:99:0,120,2103	0/0:36,0:36:99:0,105,1856	0/0:28,0:28:72.21:0,72,1206	0/0:15,0:15:42.13:0,42,726	0/0:52,0:52:99:0,148,2621	0/0:18,0:18:51.17:0,51,896	0/0:13,0:13:39.13:0,39,666	0/0:31,0:31:87.30:0,87,1557	0/0:19,0:19:57.20:0,57,1026	0/0:26,0:26:69.24:0,69,1228	0/0:31,0:31:90.21:0,90,1486	0/0:15,0:15:45.15:0,45,793
chr10	67151462	.	G	GT	915.17	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-7.701;DP=708;FS=1.634;HRun=4;HaplotypeScore=64.9218;InbreedingCoeff=0.9991;MQ=88.70;MQ0=0;MQRankSum=0.277;QD=31.56;ReadPosRankSum=-4.040;VQSLOD=2.1665;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:60,0:60:99:0,174,1949	0/0:10,0:10:30.09:0,30,340	0/0:22,0:22:57.13:0,57,630	0/0:30,0:30:78.21:0,78,872	0/0:16,0:16:42.12:0,42,476	0/0:24,0:24:72.21:0,72,817	0/0:33,0:33:93.25:0,93,1044	1/1:3,26:29:75.24:1010,75,0	0/0:25,0:25:75.21:0,75,851	0/0:30,0:30:90.23:0,90,1002	0/0:13,0:13:36.10:0,36,408	0/0:33,0:33:96.27:0,96,1089	0/0:32,0:32:90.26:0,90,1021	0/0:24,0:24:66.19:0,66,749	0/0:27,0:27:72.20:0,72,817	0/0:21,0:21:63.15:0,63,701	0/0:40,0:40:99:0,117,1315	0/0:30,0:30:81.23:0,81,919	0/0:28,0:28:81.17:0,81,886	0/0:18,0:18:48.12:0,48,535	0/0:31,0:31:93.25:0,93,1045	0/0:16,0:16:48.14:0,48,545	0/0:14,0:14:42.12:0,42,476	0/0:29,0:29:81.19:0,81,905	0/0:13,0:13:39.11:0,39,442	0/0:22,0:22:60.16:0,60,673	0/0:26,0:26:72.15:0,72,783	0/0:12,0:12:36.10:0,36,408
chr10	67152617	.	TGA	T	3442.22	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.161;DP=705;FS=10.029;HRun=0;HaplotypeScore=86.9011;InbreedingCoeff=0.9981;MQ=89.94;MQ0=0;MQRankSum=-4.892;QD=35.12;ReadPosRankSum=2.681;VQSLOD=5.5784;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,43:45:99:1552,111,0	1/1:0,22:22:63.21:882,63,0	0/0:28,0:29:72.16:0,72,1258	0/0:25,0:25:68.73:0,69,1103	0/0:18,0:18:45.15:0,45,805	0/0:28,0:28:84.27:0,84,1481	0/0:25,0:25:72.24:0,72,1258	0/0:26,0:26:75.25:0,75,1324	0/0:36,0:36:99:0,102,1796	0/0:22,0:22:63.22:0,63,1130	0/0:17,0:17:51.17:0,51,911	0/0:31,0:31:87.26:0,87,1474	0/0:22,0:22:63.22:0,63,1121	0/0:21,0:21:60.21:0,60,1070	0/0:32,0:32:96.32:0,96,1692	0/0:21,0:21:60.19:0,60,1049	1/1:1,30:31:72.24:1008,72,0	0/0:23,0:23:66.23:0,66,1187	0/0:27,0:27:75.22:0,75,1315	0/0:9,0:9:27.09:0,27,478	0/0:34,0:34:99:0,102,1807	0/0:26,0:26:65.99:0,66,1146	0/0:12,0:12:36.12:0,36,648	0/0:38,0:37:99:0,108,1884	0/0:24,0:24:66.23:0,66,1174	0/0:29,0:29:81.28:0,81,1451	0/0:25,0:25:75.26:0,75,1342	0/0:7,0:7:21.07:0,21,378
chr10	67153791	.	C	CA	597.70	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-3.986;DP=698;FS=7.104;HRun=8;HaplotypeScore=106.2778;InbreedingCoeff=0.9814;MQ=81.65;MQ0=0;MQRankSum=-2.410;QD=22.99;ReadPosRankSum=-3.841;VQSLOD=1.7111;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:46:99:0,126,1153	0/0:7,0:7:15:0,15,137	0/0:24,0:24:56.10:0,56,473	0/0:23,0:22:49.43:0,49,414	0/0:30,0:30:78.03:0,78,709	0/0:23,0:23:63.01:0,63,572	0/0:23,0:23:63.01:0,63,571	1/1:5,21:26:60.18:693,60,0	0/0:28,0:28:51.45:0,51,635	0/0:18,0:18:48.03:0,48,439	0/0:17,0:17:39:0,39,355	0/0:34,0:34:81.02:0,81,741	0/0:24,0:24:62.98:0,63,568	0/0:21,0:21:57.03:0,57,522	0/0:29,0:29:81.03:0,81,741	0/0:31,0:31:81:0,81,732	0/0:41,0:41:99:0,120,1098	0/0:29,0:29:87.01:0,87,789	0/0:19,0:19:45:0,45,412	0/0:23,0:23:57.01:0,57,521	0/0:30,0:30:81.03:0,81,737	0/0:24,1:25:28.22:0,28,503	0/0:14,0:14:36.02:0,36,329	0/0:24,0:24:65.96:0,66,589	0/0:27,0:27:75:0,75,679	0/0:33,0:33:90.05:0,90,824	0/0:20,0:20:54.02:0,54,494	0/0:8,0:8:24.01:0,24,220
chr10	67156874	.	CCCCCA	C	2713.99	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-1.828;DP=544;FS=0.555;HRun=0;HaplotypeScore=138.9682;InbreedingCoeff=0.9796;MQ=70.71;MQ0=0;MQRankSum=-6.844;QD=34.79;ReadPosRankSum=0.327;VQSLOD=3.6742;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,37:46:84.25:1613,84,0	1/1:1,5:6:12.04:236,12,0	0/0:13,0:13:30.10:0,30,786	0/0:15,0:15:33.04:0,33,675	0/0:14,0:14:36.12:0,36,999	0/0:20,0:20:57.20:0,57,1680	0/0:29,0:29:84.29:0,84,2429	0/0:20,0:20:36.12:0,36,978	0/0:21,0:21:60.21:0,60,1769	0/0:15,0:15:36.11:0,36,942	0/0:13,0:13:33.11:0,33,950	0/0:27,0:27:72.25:0,72,2095	0/0:19,0:19:48.16:0,48,1398	0/0:22,0:22:51.18:0,51,1471	0/0:13,0:13:36.12:0,36,1029	0/0:28,0:28:78.25:0,78,2226	1/1:5,21:26:51.65:1004,52,0	0/0:21,0:21:51.15:0,51,1385	0/0:19,0:19:45.15:0,45,1306	0/0:11,0:11:30.10:0,30,841	0/0:39,0:39:99:0,99,2917	0/0:18,0:18:51.17:0,51,1496	0/0:9,0:9:18.06:0,18,531	0/0:25,0:25:60.16:0,60,1614	0/0:11,0:11:33.11:0,33,918	0/0:21,0:21:51.17:0,51,1433	0/0:15,0:15:42.10:0,42,1140	0/0:8,0:8:15.05:0,15,443
chr10	67157595	.	GA	G	437.19	PASS	AB=0.855;AC=6;AF=0.107;AN=56;BaseQRankSum=6.998;DP=674;FS=8.235;HRun=11;HaplotypeScore=70.3663;InbreedingCoeff=0.2393;MQ=68.82;MQ0=1;MQRankSum=0.087;QD=4.09;ReadPosRankSum=2.803;VQSLOD=0.4521;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,2:30:50.51:0,51,723	0/0:13,0:13:36.08:0,36,376	0/0:30,2:27:12.14:0,12,282	0/0:21,1:19:11.48:0,11,278	1/1:5,25:30:62.78:509,63,0	0/1:18,4:22:22.82:23,0,384	0/0:16,1:17:14.44:0,14,352	0/0:40,0:40:65.46:0,65,855	0/0:19,0:19:51.12:0,51,538	0/0:28,1:31:65.39:0,65,868	0/0:30,2:33:46.76:0,47,877	0/1:19,3:22:7.78:8,0,536	0/0:19,1:20:29.48:0,29,513	0/0:28,1:29:38.51:0,39,615	0/0:20,2:23:13.66:0,14,515	0/0:21,1:21:32.49:0,32,545	0/1:6,1:8:13.45:13,0,111	0/0:14,1:15:36.05:0,36,366	0/1:22,3:25:7.79:8,0,516	0/0:26,2:28:19.87:0,20,610	0/0:16,0:17:47.95:0,48,494	0/0:25,0:26:63.01:0,63,641	0/0:26,1:31:33.46:0,33,645	0/0:20,2:22:32.48:0,32,543	0/0:33,0:33:84.19:0,84,878	0/0:25,2:27:10.80:0,11,503	0/0:23,0:23:57.11:0,57,586	0/0:12,1:14:5.26:0,5,245
chr10	67157691	.	AT	A	1002.48	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.830;DP=566;FS=8.178;HRun=9;HaplotypeScore=61.4917;InbreedingCoeff=0.9765;MQ=73.80;MQ0=0;MQRankSum=-0.844;QD=22.28;ReadPosRankSum=0.577;VQSLOD=4.3565;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:81.24:0,81,934	0/0:11,0:11:30.09:0,30,346	0/0:23,0:16:12.90:0,13,334	0/0:18,1:15:17.96:0,18,197	1/1:3,26:29:81.04:740,81,0	0/0:24,0:24:66.18:0,66,752	0/0:16,0:16:42.12:0,42,484	0/0:39,0:39:99:0,102,1168	0/0:20,0:20:60.15:0,60,672	0/0:20,0:20:51.15:0,51,589	0/0:18,0:18:45.12:0,45,511	0/0:20,0:20:51.15:0,51,588	0/0:17,0:17:45.11:0,45,500	0/0:13,0:13:36.09:0,36,406	0/0:19,0:19:48.13:0,48,546	0/0:17,0:17:45.13:0,45,519	1/1:1,15:16:42.02:384,42,0	0/0:23,1:24:32.71:0,33,630	0/0:22,0:22:42.12:0,42,484	0/0:26,0:26:63.16:0,63,707	0/0:10,0:10:27.08:0,27,312	0/0:11,0:11:24.06:0,24,268	0/0:19,0:19:48.11:0,48,525	0/0:7,0:7:18.05:0,18,208	0/0:27,0:27:78.22:0,78,891	0/0:25,0:25:66.20:0,66,760	0/0:32,0:32:84.24:0,84,957	0/0:10,0:10:30.09:0,30,346
chr10	67158201	.	TAC	T	2290.38	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=10.381;DP=761;FS=4.276;HRun=0;HaplotypeScore=87.9662;InbreedingCoeff=0.8448;MQ=80.08;MQ0=1;MQRankSum=-4.501;QD=28.99;ReadPosRankSum=1.444;VQSLOD=5.3925;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,41:46:99:1351,105,0	1/1:1,9:10:21.07:269,21,0	0/0:28,0:28:66.06:0,66,1073	0/0:30,0:29:69.07:0,69,1119	0/0:20,0:20:51.14:0,51,802	0/0:13,1:14:3.53:0,4,615	0/0:18,1:19:3.49:0,3,588	0/0:41,0:41:79.15:0,79,1293	0/0:41,0:41:99:0,117,1916	0/0:34,0:34:84.29:0,84,1418	0/0:19,0:19:48.16:0,48,810	0/0:38,0:38:99:0,99,1591	0/0:28,0:28:78.27:0,78,1313	0/0:24,0:24:60.19:0,60,977	0/0:34,0:34:84.26:0,84,1347	0/0:27,0:27:72.18:0,72,1109	1/1:1,22:23:63.20:811,63,0	0/0:16,1:17:3.49:0,3,589	0/0:33,0:33:90.30:0,90,1494	0/0:28,1:29:39.66:0,40,1225	0/0:48,0:48:99:0,132,2216	0/0:33,0:33:90.29:0,90,1486	0/0:22,0:22:63.22:0,63,1057	0/0:14,1:14:42.14:0,42,708	0/0:23,0:23:63.22:0,63,1063	0/0:31,1:32:45.72:0,46,1310	0/0:24,1:25:36.60:0,37,1132	0/0:8,0:8:21.07:0,21,354
chr10	67161557	.	GAAT	G	20329.34	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=14.709;DP=694;FS=1.064;HRun=0;HaplotypeScore=127.3074;InbreedingCoeff=1.0000;MQ=92.80;MQ0=0;MQRankSum=-7.505;QD=39.47;ReadPosRankSum=5.015;VQSLOD=5.6000;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,40:45:99:1569,99,0	1/1:1,15:16:45.15:713,45,0	0/0:39,0:39:93.31:0,93,1961	0/0:23,0:23:60.19:0,60,1204	1/1:2,26:28:69.24:1093,69,0	1/1:0,25:25:69.24:1093,69,0	1/1:3,29:32:72.25:1141,72,0	0/0:26,0:26:78.25:0,78,1614	1/1:3,18:21:48.16:760,48,0	1/1:0,19:19:57.18:882,57,0	1/1:0,16:16:48.16:760,48,0	1/1:2,22:24:60.20:951,60,0	0/0:24,0:24:69.24:0,69,1505	1/1:1,28:29:78.27:1236,78,0	1/1:2,25:27:69.24:1094,69,0	1/1:0,23:23:48:761,48,0	1/1:1,16:17:42.14:665,42,0	1/1:2,17:19:35.90:570,36,0	1/1:3,22:25:66.21:1011,66,0	1/1:2,30:32:84.29:1331,84,0	1/1:1,21:22:52.73:853,53,0	0/0:22,0:22:60.21:0,60,1307	0/0:19,0:19:57.20:0,57,1236	0/0:26,0:26:72.25:0,72,1552	1/1:1,20:21:54.18:856,54,0	1/1:1,26:27:75.26:1183,75,0	1/1:4,27:31:72.25:1140,72,0	1/1:0,16:16:42.14:666,42,0
chr10	67162045	.	T	TC	946.89	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-2.763;DP=762;FS=1.651;HRun=2;HaplotypeScore=80.0149;InbreedingCoeff=0.9999;MQ=89.60;MQ0=0;MQRankSum=-1.118;QD=33.82;ReadPosRankSum=-3.268;VQSLOD=2.6167;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,123,1524	0/0:14,0:14:39.12:0,39,483	0/0:32,0:32:87.26:0,87,1061	0/0:26,0:26:63.15:0,63,742	0/0:27,0:27:81.16:0,81,949	0/0:27,0:27:81.24:0,81,991	0/0:33,0:33:84.23:0,84,1005	1/1:1,27:28:75.23:1042,75,0	0/0:25,0:25:75.22:0,75,917	0/0:26,0:26:72.18:0,72,865	0/0:18,0:18:48.15:0,48,595	0/0:18,0:18:51.13:0,51,596	0/0:26,0:26:78.22:0,78,943	0/0:23,0:23:69.19:0,69,821	0/0:41,0:41:99:0,120,1474	0/0:29,0:29:87.23:0,87,1040	0/0:42,0:42:99:0,123,1524	0/0:18,0:18:51.16:0,51,632	0/0:26,0:26:69.18:0,69,827	0/0:28,0:28:84.18:0,84,1020	0/0:35,0:35:99:0,99,1200	0/0:34,0:34:99:0,102,1232	0/0:23,0:23:66.21:0,66,817	0/0:34,0:34:99:0,99,1213	0/0:17,0:17:51.15:0,51,620	0/0:27,0:27:78.23:0,78,947	0/0:25,0:25:72.18:0,72,853	0/0:16,0:16:48.10:0,48,564
chr10	67163608	.	TTCC	T	727.50	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.841;DP=806;FS=11.073;HRun=0;HaplotypeScore=118.5568;InbreedingCoeff=0.9987;MQ=75.50;MQ0=3;MQRankSum=-2.184;QD=29.10;ReadPosRankSum=-4.823;VQSLOD=1.8856;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,144,2897	0/0:12,0:12:33.11:0,33,691	0/0:47,0:39:70.77:0,71,1392	0/0:51,0:47:83.34:0,83,1545	0/0:24,0:24:66.23:0,66,1359	0/0:25,0:25:72.25:0,72,1546	0/0:24,0:24:54.19:0,54,1133	1/1:5,20:25:60.13:822,60,0	0/0:28,0:28:81.28:0,81,1739	0/0:26,0:26:72.25:0,72,1527	0/0:13,0:13:33.11:0,33,695	0/0:29,0:29:78.27:0,78,1634	0/0:31,0:31:84.27:0,84,1726	0/0:25,0:25:66.23:0,66,1413	0/0:47,0:47:99:0,126,2626	0/0:34,0:34:90.30:0,90,1863	0/0:31,0:31:80.25:0,80,1534	0/0:21,0:21:57.18:0,57,1166	0/0:18,0:18:48.14:0,48,964	0/0:11,0:11:30.09:0,30,577	0/0:42,0:42:99:0,114,2422	0/0:21,0:21:60.21:0,60,1253	0/0:28,0:28:75.26:0,75,1581	0/0:44,0:44:99:0,120,2448	0/0:29,0:29:84.27:0,84,1691	0/0:26,0:26:69.23:0,69,1434	0/0:30,0:30:81.16:0,81,1542	0/0:11,0:11:33.08:0,33,620
chr10	67164429	.	AG	A	4173.54	PASS	AB=1.000;AC=43;AF=0.768;AN=56;BaseQRankSum=2.988;DP=491;FS=1.119;HRun=1;HaplotypeScore=67.7629;InbreedingCoeff=0.5913;MQ=45.21;MQ0=51;MQRankSum=-4.162;QD=10.36;ReadPosRankSum=-0.504;VQSLOD=1.2395;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:31,1:25:54.68:310,55,0	1/1:9,0:6:13.34:65,13,0	0/0:20,0:6:0.22:0,0,27	0/1:23,0:9:22.97:23,0,27	1/1:17,1:17:30.75:290,31,0	1/1:21,1:21:46.63:278,47,0	1/1:12,0:11:22.65:146,23,0	0/0:20,0:15:41.10:0,41,342	1/1:8,0:7:15.51:100,16,0	1/1:25,0:21:55.24:340,55,0	1/1:7,0:7:11.78:55,12,0	1/1:9,0:8:22.78:143,23,0	0/0:14,1:14:19.48:0,19,140	1/1:12,0:12:14.05:59,14,0	1/1:22,0:21:43.90:241,44,0	1/1:12,0:9:22.04:153,22,0	1/1:31,0:23:19.38:110,19,0	1/1:29,0:27:57.20:364,57,0	1/1:22,1:20:50.05:320,50,0	1/1:13,0:13:18.43:202,18,0	0/0:5,0:1:2.92:0,3,17	0/1:15,0:13:15.35:15,0,133	0/1:11,0:9:12.16:12,0,87	0/0:28,0:25:37.04:0,37,308	1/1:13,3:14:31.10:220,31,0	1/1:14,0:14:38.97:264,39,0	1/1:22,0:20:41.03:267,41,0	1/1:16,2:13:28.72:195,29,0
chr10	67164442	.	A	AAAG	331.09	PASS	AB=0.913;AC=4;AF=0.074;AN=54;BaseQRankSum=1.362;DP=521;FS=12.338;HRun=0;HaplotypeScore=104.8262;InbreedingCoeff=-0.0333;MQ=51.78;MQ0=31;MQRankSum=2.405;QD=3.60;ReadPosRankSum=1.736;VQSLOD=1.5116;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:31,0:26:31.85:192,0,32	0/1:11,0:8:11.64:63,0,12	0/0:27,0:7:9.82:0,10,72	0/0:26,0:11:20:0,20,166	0/1:20,0:19:64.62:137,0,65	0/0:19,0:19:42.73:0,43,291	0/0:13,0:12:35.38:0,35,256	0/0:20,0:19:45.26:0,45,511	0/0:12,0:11:23.43:0,23,171	0/0:26,0:24:59.24:0,59,438	0/0:14,0:14:29.68:0,30,245	0/0:10,0:9:21.73:0,22,167	0/0:13,0:13:26.87:0,27,291	0/0:13,0:13:18.21:0,18,137	0/0:19,0:19:44.18:0,44,321	0/0:13,0:12:26.52:0,27,187	0/1:14,13:24:14.19:48,0,14	0/0:30,0:29:41.35:0,41,230	0/0:28,0:26:57.01:0,57,430	0/0:17,0:17:32.52:0,33,196	./.	0/0:15,0:14:35.37:0,35,343	0/0:13,0:12:29.82:0,30,280	0/0:22,0:20:42.59:0,43,545	0/0:20,0:19:36.49:0,36,262	0/0:15,0:15:34.95:0,35,227	0/0:22,0:20:34.97:0,35,242	0/0:19,0:14:33.34:0,33,304
chr10	67164505	.	G	GA	1381.95	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-8.852;DP=547;FS=0.000;HRun=4;HaplotypeScore=63.2567;InbreedingCoeff=0.9956;MQ=83.04;MQ0=0;MQRankSum=-3.143;QD=41.88;ReadPosRankSum=-5.255;VQSLOD=0.6618;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:84.28:0,84,1174	0/0:7,0:7:21.07:0,21,293	0/0:22,0:22:57.17:0,57,754	0/0:21,0:21:61.95:0,62,812	0/0:26,0:26:78.26:0,78,1088	0/0:14,0:14:36.12:0,36,502	0/0:24,0:24:69.21:0,69,934	1/1:2,31:33:93.32:1477,93,0	0/0:20,0:20:60.20:0,60,839	0/0:30,0:30:90.26:0,90,1236	0/0:19,0:19:57.19:0,57,796	0/0:17,0:17:51.17:0,51,713	0/0:16,0:16:48.16:0,48,671	0/0:16,0:16:45.15:0,45,626	0/0:19,0:19:54.18:0,54,749	0/0:12,0:12:36.12:0,36,503	0/0:29,0:29:63.19:0,63,856	0/0:29,0:28:78.13:0,78,1086	0/0:17,0:17:48.16:0,48,665	0/0:17,0:17:48.16:0,48,671	0/0:16,0:16:48.14:0,48,647	0/0:13,0:13:39.13:0,39,545	0/0:15,0:15:45.15:0,45,629	0/0:20,0:20:54.18:0,54,747	0/0:20,0:20:60.20:0,60,838	0/0:16,0:16:48.14:0,48,652	0/0:15,0:15:45.15:0,45,620	0/0:16,0:16:48.16:0,48,670
chr10	67164829	.	AT	A	8520.69	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=4.379;DP=519;FS=10.250;HRun=10;HaplotypeScore=59.8768;InbreedingCoeff=0.9930;MQ=72.62;MQ0=0;MQRankSum=-0.209;QD=21.74;ReadPosRankSum=3.418;VQSLOD=5.4570;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,23:27:62.96:547,63,0	1/1:2,8:10:17.99:156,18,0	0/0:18,0:16:15.06:0,15,268	0/0:20,0:17:21.16:0,21,212	1/1:1,24:25:65.97:573,66,0	1/1:4,17:21:47.97:417,48,0	1/1:1,15:16:35.99:312,36,0	0/0:36,0:36:75.16:0,75,793	1/1:2,12:14:35.98:313,36,0	1/1:2,20:22:62.98:545,63,0	1/1:1,14:15:35.99:312,36,0	1/1:0,18:17:38.99:339,39,0	0/0:15,0:15:42.11:0,42,463	1/1:1,9:10:23.99:208,24,0	1/1:0,19:19:47.99:417,48,0	1/1:4,17:21:50.98:443,51,0	1/1:2,17:19:50.97:443,51,0	1/1:2,22:24:62.95:541,63,0	1/1:4,16:20:50.94:436,51,0	1/1:2,21:23:65.95:567,66,0	1/1:2,12:14:29.99:260,30,0	0/0:9,0:9:24.06:0,24,265	0/0:11,0:11:27.07:0,27,297	0/0:17,0:17:45.12:0,45,496	1/1:3,27:30:74.98:651,75,0	1/1:0,14:14:41.99:365,42,0	1/1:0,21:21:56.99:495,57,0	1/1:1,8:9:21:182,21,0
chr10	67164975	.	AAC	A	450.98	PASS	AB=0.970;AC=7;AF=0.135;AN=52;BaseQRankSum=0.969;DP=454;FS=2.084;HRun=0;HaplotypeScore=71.5758;InbreedingCoeff=0.2407;MQ=51.99;MQ0=32;MQRankSum=2.917;QD=4.75;ReadPosRankSum=2.743;VQSLOD=1.8955;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:26,6:32:14.87:164,15,0	./.	0/0:13,0:4:0.47:0,0,1	./.	0/1:12,0:12:8.12:8,0,39	0/0:15,0:11:6.01:0,6,66	0/0:21,0:21:8.99:0,9,85	0/0:32,0:31:20.51:0,21,207	0/0:10,0:13:5.93:0,6,51	0/0:22,0:19:25.12:0,25,263	0/0:8,0:7:5.99:0,6,50	0/0:20,0:20:6.01:0,6,63	0/1:9,1:10:20.78:21,0,121	0/0:11,0:9:6:0,6,62	0/0:10,0:18:3:0,3,26	0/0:15,0:15:6.47:0,6,65	1/1:15,12:27:33.09:361,33,0	0/0:10,0:10:11.05:0,11,102	0/0:17,0:17:15.01:0,15,179	0/0:8,0:7:3.01:0,3,41	0/0:20,0:28:5.71:0,6,52	0/1:14,0:14:26.18:26,0,39	0/0:6,0:6:6.02:0,6,85	0/0:14,0:16:1.81:0,2,321	0/0:12,0:12:6:0,6,52	0/0:10,0:10:9.90:0,10,104	0/0:8,0:14:5.97:0,6,46	0/0:7,0:5:9:0,9,78
chr10	67165238	.	G	GT	482.60	PASS	AB=1.000;AC=3;AF=0.056;AN=54;BaseQRankSum=-0.610;DP=375;FS=0.811;HRun=0;HaplotypeScore=180.5689;InbreedingCoeff=0.4651;MQ=81.45;MQ0=0;MQRankSum=-1.169;QD=12.70;ReadPosRankSum=-1.700;VQSLOD=4.0468;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	0/0:6,0:6:10.63:0,11,34	0/0:19,0:19:22.31:0,22,168	0/0:13,0:13:3.98:0,4,123	1/1:2,27:29:47.69:574,48,0	0/0:7,0:7:17.83:0,18,127	0/0:15,0:15:19.95:0,20,122	0/0:18,0:18:37.30:0,37,245	0/0:13,0:13:32.87:0,33,265	0/0:18,0:17:44.03:0,44,269	0/0:19,0:19:37.27:0,37,264	0/0:14,0:14:35.80:0,36,269	0/0:20,0:20:50.03:0,50,353	0/0:10,0:10:26.71:0,27,187	0/0:12,0:12:32.52:0,33,219	0/0:16,0:16:41.65:0,42,299	0/0:1,0:1:2.22:0,2,7	0/0:6,0:6:14.74:0,15,95	0/1:9,0:9:9.11:9,0,76	0/0:16,0:17:38.63:0,39,277	0/0:10,0:10:1.03:0,1,74	0/0:17,0:17:39.30:0,39,266	0/0:17,0:17:36.50:0,36,282	0/0:11,0:10:20.92:0,21,163	0/0:16,0:16:20.53:0,21,171	0/0:16,0:16:44.55:0,45,318	0/0:21,0:21:50.85:0,51,351	0/0:5,0:5:14.84:0,15,101
chr10	67165271	.	G	GT	1531.21	PASS	AB=0.895;AC=53;AF=0.946;AN=56;BaseQRankSum=-0.081;DP=349;FS=2.629;HRun=0;HaplotypeScore=220.8477;InbreedingCoeff=-0.0008;MQ=52.81;MQ0=0;MQRankSum=-0.513;QD=4.39;ReadPosRankSum=-2.562;VQSLOD=3.0812;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:4:1.55:4,2,0	1/1:11,1:12:11.60:63,12,0	1/1:2,3:5:10.19:73,10,0	0/1:5,1:6:17.58:42,0,18	1/1:26,0:26:4.49:69,4,0	1/1:10,0:10:5.89:15,6,0	1/1:11,1:12:10.51:70,11,0	1/1:11,1:12:17.75:64,18,0	0/1:11,1:12:17.40:33,0,17	1/1:17,5:22:41:306,41,0	1/1:15,2:17:4.27:49,4,0	1/1:11,2:13:6.87:85,7,0	1/1:18,2:20:4.04:68,4,0	1/1:11,0:11:3.84:10,4,0	1/1:9,0:9:6.17:22,6,0	1/1:18,0:18:10.71:34,11,0	1/1:3,0:3:4.15:14,4,0	1/1:7,0:7:11.77:47,12,0	1/1:6,1:7:9.21:33,9,0	1/1:14,3:17:20.75:111,21,0	1/1:7,0:7:4.27:13,4,0	0/1:17,2:19:1.42:104,0,1	1/1:13,0:13:3.41:24,3,0	1/1:8,0:8:1.40:4,1,0	1/1:16,0:16:10.77:36,11,0	1/1:17,1:18:25.37:109,25,0	1/1:19,2:21:4.07:77,4,0	1/1:3,1:4:7.94:51,8,0
chr10	67165291	.	GA	G	594.99	PASS	AB=0.914;AC=24;AF=0.480;AN=50;BaseQRankSum=-7.421;DP=333;FS=196.860;HRun=2;HaplotypeScore=270.1374;InbreedingCoeff=-0.0989;MQ=28.94;MQ0=0;MQRankSum=-0.377;QD=2.40;ReadPosRankSum=-4.857;VQSLOD=-0.5554;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:7:13.11:0,13,36	0/1:4,1:5:8.79:9,0,12	./.	./.	0/1:20,3:22:25.71:110,0,26	0/0:9,0:9:5.30:0,5,26	0/1:7,1:8:3.85:14,0,4	1/1:9,4:13:10.39:145,10,0	0/1:13,1:14:20.55:22,0,21	1/1:20,1:21:8.96:38,9,0	0/1:15,1:16:13.68:58,0,14	0/0:10,0:10:9.20:0,9,38	0/0:19,2:21:1.48:0,1,42	0/1:8,2:10:13.52:73,0,14	0/0:12,0:12:10.07:0,10,30	0/1:15,1:16:14.94:15,0,39	0/0:2,0:2:4.26:0,4,13	1/1:8,1:9:2.45:20,2,0	./.	0/1:19,0:19:26.65:27,0,42	1/1:6,2:8:0.62:1,1,0	0/0:20,1:21:14.37:0,14,72	0/1:13,2:15:26.56:72,0,27	1/1:5,1:6:6.23:51,6,0	0/1:15,0:15:18.02:18,0,28	0/1:17,2:19:7.01:12,0,7	0/1:24,2:26:8.73:9,0,64	1/1:5,0:5:2.28:51,2,0
chr10	67165326	.	TGG	T	3417.29	PASS	AC=52;AF=1.000;AN=52;BaseQRankSum=1.895;DP=364;FS=0.000;HRun=3;HaplotypeScore=309.0806;InbreedingCoeff=-0.0117;MQ=31.49;MQ0=0;MQRankSum=0.752;QD=9.41;ReadPosRankSum=1.349;VQSLOD=-0.1420;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:14:28.91:112,29,0	1/1:7,0:7:18.88:76,19,0	./.	./.	1/1:17,1:17:23.84:112,24,0	1/1:8,0:8:21.72:91,22,0	1/1:12,0:12:19.28:78,19,0	1/1:23,0:23:58.85:279,59,0	1/1:16,0:16:40.59:168,41,0	1/1:21,1:22:43.55:222,44,0	1/1:15,0:15:29.32:116,29,0	1/1:18,0:18:45.99:197,46,0	1/1:17,1:18:42.68:174,43,0	1/1:7,0:7:10.37:39,10,0	1/1:15,0:15:37.99:155,38,0	1/1:18,0:18:36.64:157,37,0	1/1:6,0:6:15.97:64,16,0	1/1:6,0:6:4.36:53,4,0	1/1:9,0:9:19.35:87,19,0	1/1:18,0:18:42.93:173,43,0	1/1:8,0:8:10.68:44,11,0	1/1:24,0:24:54.78:211,55,0	1/1:13,1:14:34.66:147,35,0	1/1:7,0:7:16.08:66,16,0	1/1:14,0:14:27.30:110,27,0	1/1:20,0:20:45.86:220,46,0	1/1:22,1:23:55.20:231,55,0	1/1:3,0:3:8.29:36,8,0
chr10	67165329	.	GT	G	9963.73	PASS	AC=52;AF=1.000;AN=52;DP=353;FS=0.000;HRun=5;HaplotypeScore=270.5205;InbreedingCoeff=-0.0059;MQ=31.56;MQ0=0;QD=28.31;VQSLOD=1.3672;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,13:14:33.09:371,33,0	1/1:0,7:7:21.06:237,21,0	./.	./.	1/1:3,15:17:27.07:301,27,0	1/1:0,8:8:24.07:271,24,0	1/1:1,10:11:21.06:233,21,0	1/1:1,21:22:63.18:711,63,0	1/1:0,16:16:45.13:508,45,0	1/1:4,15:19:45.04:491,45,0	1/1:1,14:15:33.09:372,33,0	1/1:1,17:18:48.09:526,48,0	1/1:4,14:18:45.13:507,45,0	1/1:2,5:7:12.03:135,12,0	1/1:1,14:15:42.08:460,42,0	1/1:1,15:16:42.12:473,42,0	1/1:0,6:6:18.05:203,18,0	1/1:0,6:6:18.05:203,18,0	1/1:0,9:9:21.01:236,21,0	1/1:1,16:17:48.14:542,48,0	1/1:0,8:8:12.03:134,12,0	1/1:0,22:22:63.12:689,63,0	1/1:1,13:14:39.11:437,39,0	1/1:0,7:7:18.05:203,18,0	1/1:3,11:14:30.08:338,30,0	1/1:3,17:20:51.14:574,51,0	1/1:2,20:22:63.18:707,63,0	1/1:0,3:3:9.03:102,9,0
chr10	67165359	.	TG	T	3694.98	PASS	AB=1.000;AC=55;AF=0.982;AN=56;BaseQRankSum=0.857;DP=359;FS=12.804;HRun=2;HaplotypeScore=272.8606;InbreedingCoeff=0.3244;MQ=34.28;MQ0=0;MQRankSum=0.337;QD=10.29;ReadPosRankSum=-0.193;VQSLOD=-0.3349;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,16:16:35.55:171,36,0	1/1:0,9:9:24.21:109,24,0	1/1:0,1:1:3.01:35,3,0	0/1:1,0:1:0:0,0,0	1/1:1,16:16:30.73:164,31,0	1/1:0,5:5:12.20:43,12,0	1/1:0,15:15:25.90:103,26,0	1/1:3,19:22:58.75:401,59,0	1/1:2,15:17:37.58:149,38,0	1/1:5,14:19:36.92:194,37,0	1/1:1,14:15:29.96:128,30,0	1/1:1,20:20:43.08:179,43,0	1/1:1,18:19:25.62:184,26,0	1/1:0,4:4:7.12:25,7,0	1/1:2,17:19:43.72:160,44,0	1/1:0,16:16:33.45:131,33,0	1/1:1,8:9:21.66:101,22,0	1/1:1,5:6:17.39:101,17,0	1/1:0,9:9:23.29:131,23,0	1/1:4,15:19:39.94:173,40,0	1/1:1,7:8:10.76:46,11,0	1/1:4,18:22:20.92:143,21,0	1/1:0,16:16:33.50:142,34,0	1/1:0,8:8:15.79:97,16,0	1/1:2,7:9:13.81:59,14,0	1/1:0,16:15:43.40:276,43,0	1/1:2,16:18:43.07:204,43,0	1/1:0,3:3:8.58:46,9,0
chr10	67165965	.	TGCTGGG	T	1633.30	PASS	AB=0.558;AC=3;AF=0.054;AN=56;BaseQRankSum=5.278;DP=664;FS=0.000;HRun=0;HaplotypeScore=164.6456;InbreedingCoeff=0.6334;MQ=75.89;MQ0=1;MQRankSum=-8.068;QD=54.44;ReadPosRankSum=0.791;VQSLOD=3.3529;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,108,3668	0/0:10,0:10:30.09:0,30,987	0/0:17,0:17:48.14:0,48,1398	0/0:17,0:16:47.75:0,48,1425	0/0:23,0:23:66.21:0,66,2156	0/0:26,0:26:78.25:0,78,2693	0/0:36,0:36:90.30:0,90,2973	0/0:29,0:29:78.25:0,78,2484	0/0:14,0:14:42.13:0,42,1330	0/0:21,0:21:60.12:0,60,1978	0/0:16,0:16:48.16:0,48,1616	0/0:32,0:32:84.26:0,84,2786	0/0:25,0:25:72.25:0,72,2554	0/0:30,0:30:84.27:0,84,2877	0/0:18,0:18:45.13:0,45,1444	0/0:14,0:14:36.10:0,36,1168	0/0:35,0:35:99:0,102,3534	0/0:23,0:22:60.21:0,60,2072	0/0:15,0:15:42.14:0,42,1472	0/0:21,0:21:63.22:0,63,2178	0/0:60,0:60:99:0,172,5753	0/0:15,0:15:42.14:0,42,1496	0/0:26,0:26:78.23:0,78,2476	0/0:26,0:26:75.25:0,75,2506	0/0:18,0:18:51.17:0,51,1740	0/1:5,19:24:37.82:1381,0,38	0/0:26,0:26:75.26:0,75,2579	1/1:0,6:6:15.05:354,15,0
chr10	67166030	.	A	AAG	23220.28	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-15.843;DP=666;FS=1.394;HRun=0;HaplotypeScore=76.5367;InbreedingCoeff=0.9948;MQ=91.90;MQ0=2;MQRankSum=-5.651;QD=50.70;ReadPosRankSum=4.067;VQSLOD=5.7863;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,117,1694	0/0:9,0:9:24.07:0,24,334	0/0:30,0:30:67.72:0,68,931	0/0:30,0:30:77.50:0,78,1052	1/1:1,28:28:78.27:1456,78,0	1/1:0,27:27:81.28:1517,81,0	1/1:3,27:31:75.26:1400,75,0	1/1:0,26:27:81.25:1445,81,0	1/1:1,19:20:54.19:1012,54,0	1/1:1,20:21:60.21:1107,60,0	1/1:0,19:19:54.19:1012,54,0	1/1:1,25:26:75.26:1388,75,0	0/0:24,0:24:66.22:0,66,972	1/1:2,30:32:93.32:1733,93,0	1/1:0,25:25:63.22:1180,63,0	1/1:1,18:19:49.98:898,50,0	0/0:23,0:23:66.22:0,66,967	1/1:1,25:26:60.21:1124,60,0	1/1:1,19:21:60.17:1092,60,0	1/1:2,14:16:45.15:821,45,0	1/1:1,41:42:99:2078,111,0	0/0:13,0:13:39.13:0,39,573	0/0:12,0:12:33.11:0,33,481	0/0:27,0:27:72.24:0,72,1059	1/1:1,12:13:33.11:618,33,0	1/1:1,35:36:99:1910,102,0	1/1:0,23:23:66.23:1236,66,0	1/1:2,2:4:12.04:196,12,0
chr10	67185177	.	A	AT	9623.73	PASS	AB=0.947;AC=37;AF=0.661;AN=56;BaseQRankSum=-13.493;DP=525;FS=0.801;HRun=8;HaplotypeScore=69.8817;InbreedingCoeff=0.9070;MQ=78.12;MQ0=0;MQRankSum=-1.347;QD=26.15;ReadPosRankSum=1.456;VQSLOD=5.6283;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:69:0,69,625	0/0:11,0:11:30.01:0,30,274	0/0:18,0:17:27:0,27,245	0/1:17,0:14:9.79:10,0,57	0/0:1,0:11:22.41:0,22,66	1/1:2,18:20:51.15:588,51,0	1/1:2,21:23:57.17:658,57,0	1/1:5,19:24:5.24:568,5,0	1/1:1,25:26:60.18:693,60,0	1/1:4,18:22:26.68:551,27,0	1/1:1,8:9:24.07:277,24,0	1/1:1,18:19:48.14:554,48,0	0/0:19,0:19:41.99:0,42,379	1/1:1,20:21:57.17:658,57,0	1/1:1,12:13:29.93:346,30,0	1/1:6,10:16:21.06:242,21,0	0/0:18,0:19:41:0,41,355	1/1:3,24:27:74.59:838,75,0	1/1:1,13:14:39.10:441,39,0	1/1:3,7:10:21.53:239,22,0	1/1:6,22:28:57.17:658,57,0	0/0:16,0:16:45.02:0,45,411	0/0:8,0:8:21.01:0,21,192	0/0:24,0:24:66.01:0,66,599	1/1:1,16:17:45.13:519,45,0	1/1:4,22:26:72.17:816,72,0	1/1:1,22:23:60.18:692,60,0	1/1:4,8:12:24.07:275,24,0
chr10	67185205	.	C	CTTTT	2515.14	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-1.535;DP=496;FS=2.700;HRun=11;HaplotypeScore=115.7701;InbreedingCoeff=0.9242;MQ=74.53;MQ0=0;MQRankSum=-4.114;QD=35.93;ReadPosRankSum=-0.700;VQSLOD=2.5339;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:9,18:33:66.18:1340,66,0	1/1:3,5:8:18.02:351,18,0	0/0:16,0:13:7.22:0,7,85	0/0:17,0:14:14.04:0,14,172	1/1:2,0:12:23.62:181,24,0	0/0:18,0:19:51.08:0,51,662	0/0:21,0:21:48.04:0,48,635	0/0:27,0:27:63.05:0,63,843	0/0:20,0:21:51.03:0,51,659	0/0:19,0:19:35.93:0,36,490	0/0:5,0:5:12.01:0,12,164	0/0:16,0:17:35.99:0,36,472	0/0:16,0:17:51.15:0,51,674	0/0:23,0:23:54.02:0,54,716	0/0:11,0:11:24:0,24,327	0/0:12,0:13:28.28:0,28,354	1/1:5,11:17:36.12:801,36,0	0/0:25,0:26:66.11:0,66,881	0/0:20,0:20:32.91:0,33,449	0/0:8,0:9:14.91:0,15,184	0/0:20,0:22:57.06:0,57,721	0/0:14,0:15:6.03:0,6,325	0/0:7,0:7:18.06:0,18,245	0/0:22,0:22:51:0,51,655	0/0:13,0:13:29.76:0,30,366	0/0:26,0:27:66.09:0,66,867	0/0:24,0:24:60.15:0,60,813	0/0:13,0:13:17.95:0,18,245
chr10	67186725	.	A	ATCTG	20565.95	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=9.021;DP=645;FS=0.000;HRun=0;HaplotypeScore=121.4870;InbreedingCoeff=0.9724;MQ=84.06;MQ0=2;MQRankSum=-6.757;QD=51.93;ReadPosRankSum=1.781;VQSLOD=5.9557;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:93.28:0,93,1542	0/0:8,0:8:24.08:0,24,415	0/0:19,0:19:35.25:0,35,570	0/0:27,0:27:61.53:0,62,860	0/0:17,0:17:48.12:0,48,785	1/1:3,17:19:48.16:1199,48,0	1/1:6,25:32:57.20:1433,57,0	0/0:32,0:32:78.25:0,78,1297	1/1:3,24:27:66.23:1648,66,0	1/1:5,23:30:69.24:1680,69,0	1/1:4,3:7:9.03:227,9,0	1/1:7,33:41:93.32:2337,93,0	0/0:20,0:20:48.16:0,48,829	1/1:3,18:22:51.18:1288,51,0	1/1:3,34:37:81.28:2047,81,0	1/1:2,16:19:36.12:909,36,0	0/0:30,0:30:81.22:0,81,1317	1/1:6,27:34:78.27:1947,78,0	1/1:7,10:20:44.98:794,45,0	1/1:3,5:8:18.06:447,18,0	1/1:12,32:46:66.23:1668,66,0	0/0:13,0:13:39.12:0,39,643	0/0:4,0:4:9.03:0,9,155	0/0:47,0:47:99:0,138,2330	1/1:2,4:6:9.03:227,9,0	1/1:2,17:19:48.12:1139,48,0	1/1:3,16:20:44.97:1136,45,0	1/1:1,6:7:18.06:440,18,0
chr10	67187372	.	T	TCGCTTTAG	2138.58	PASS	AB=0.977;AC=19;AF=0.339;AN=56;BaseQRankSum=12.090;DP=552;FS=6.378;HRun=0;HaplotypeScore=397.6968;InbreedingCoeff=-0.3331;MQ=83.48;MQ0=0;MQRankSum=-13.766;QD=6.48;ReadPosRankSum=6.688;VQSLOD=0.2035;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:21,4:26:13.93:690,0,14	1/1:5,1:6:5.20:135,5,0	0/0:23,0:23:59.14:0,59,1162	0/0:21,0:21:39.09:0,39,835	0/1:25,3:30:0.26:381,0,0	0/1:25,0:25:60.88:61,0,213	0/1:13,0:13:19.30:19,0,86	0/0:39,0:39:84.19:0,84,2102	0/1:12,0:12:39.63:40,0,185	0/1:23,0:23:47.48:47,0,591	0/1:18,0:18:6.05:6,0,679	0/1:17,0:17:34.08:34,0,283	0/0:20,0:20:54.17:0,54,1289	0/1:21,0:21:33.27:33,0,494	0/1:15,0:14:23.87:24,0,251	0/1:12,0:12:5.79:6,0,329	0/1:19,2:21:28.14:684,0,28	0/1:13,0:13:29.25:29,0,185	0/0:17,0:17:20.06:0,20,771	0/0:16,0:16:2.33:0,2,487	0/1:13,0:13:18.03:18,0,224	0/0:23,0:23:60.19:0,60,1524	0/0:19,0:19:57.20:0,57,1417	0/0:35,0:35:96.31:0,96,2511	0/1:32,0:32:51:51,0,687	0/1:16,0:16:28.40:28,0,342	0/1:17,0:16:6.71:7,0,564	0/0:9,0:9:0.07:0,0,227
chr10	67187534	.	GA	G	12250.33	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=10.213;DP=566;FS=6.695;HRun=2;HaplotypeScore=59.1827;InbreedingCoeff=0.9985;MQ=74.71;MQ0=3;MQRankSum=-3.535;QD=36.79;ReadPosRankSum=4.560;VQSLOD=5.2639;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:99:0,99,1444	0/0:6,0:6:18.06:0,18,275	0/0:21,0:19:55.67:0,56,750	0/0:18,0:18:54.18:0,54,807	0/0:14,0:14:39.13:0,39,578	1/1:0,24:24:66.22:920,66,0	1/1:0,25:25:57.19:796,57,0	0/0:25,0:25:75.17:0,75,1030	1/1:0,25:25:69.23:953,69,0	1/1:0,18:18:51.13:675,51,0	1/1:0,17:17:36.11:473,36,0	1/1:0,16:16:42.14:587,42,0	0/0:21,0:21:60.17:0,60,872	1/1:0,17:17:48.16:669,48,0	1/1:0,23:22:60.20:837,60,0	1/1:0,17:17:45.15:628,45,0	0/0:29,0:28:84.29:0,84,1283	1/1:0,22:22:60.20:838,60,0	1/1:1,19:19:57.19:795,57,0	1/1:0,14:14:33.11:453,33,0	1/1:0,33:33:90.30:1257,90,0	0/0:19,0:19:57.17:0,57,817	0/0:17,0:17:48.15:0,48,714	0/0:30,0:30:90.25:0,90,1315	1/1:0,21:21:57.19:782,57,0	1/1:0,19:19:57.17:775,57,0	1/1:0,13:13:36.03:477,36,0	1/1:0,9:9:24.08:334,24,0
chr10	67187689	.	T	TG	1011.07	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=-1.429;DP=533;FS=3.557;HRun=4;HaplotypeScore=112.0989;InbreedingCoeff=0.3359;MQ=83.04;MQ0=3;MQRankSum=-0.575;QD=10.87;ReadPosRankSum=-2.743;VQSLOD=0.7072;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:2.78:0,3,30	1/1:1,0:1:0.47:1,0,0	0/0:39,0:32:25.26:0,25,468	0/0:24,0:18:10.87:0,11,270	0/0:8,0:8:1.57:0,2,30	0/1:15,0:15:2.01:2,0,205	0/0:23,0:23:56.77:0,57,521	1/1:4,30:35:95.26:1054,95,0	0/0:17,0:17:31.02:0,31,412	0/0:17,0:17:13.72:0,14,260	0/0:7,0:7:9.76:0,10,113	0/0:18,1:19:30.63:0,31,342	0/1:9,0:9:1.29:1,0,154	0/0:11,0:11:1.64:0,2,142	0/0:19,0:19:17.84:0,18,341	0/0:12,0:12:29.25:0,29,290	0/1:33,0:33:16.52:60,0,17	0/0:27,0:27:66.36:0,66,619	0/0:22,0:22:37.49:0,37,497	0/0:17,0:16:33.76:0,34,350	0/0:28,0:28:21.59:0,22,415	0/0:17,0:17:40.74:0,41,487	0/0:13,0:13:33.06:0,33,348	0/0:22,0:22:56.65:0,57,553	0/0:9,0:9:17:0,17,162	0/0:22,0:22:36.76:0,37,478	0/0:18,0:18:41.15:0,41,359	0/0:14,0:14:32.25:0,32,328
chr10	67187693	.	G	GT	606.98	PASS	AB=0.940;AC=16;AF=0.286;AN=56;BaseQRankSum=-2.659;DP=543;FS=4.784;HRun=10;HaplotypeScore=118.7861;InbreedingCoeff=-0.2487;MQ=79.63;MQ0=3;MQRankSum=-0.616;QD=2.09;ReadPosRankSum=-2.744;VQSLOD=-0.3997;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:37:99:0,106,818	0/0:1,0:1:2.99:0,3,24	0/1:38,0:32:45.45:45,0,135	0/0:23,0:19:14.85:0,15,129	0/0:8,0:8:20.96:0,21,169	0/1:14,2:16:34.85:35,0,58	0/0:22,1:23:31.74:0,32,181	1/1:34,0:35:30.98:297,31,0	0/0:15,1:16:23.50:0,23,170	0/1:15,3:18:64.79:75,0,65	0/1:5,1:6:23.37:23,0,25	0/1:20,0:20:7.29:7,0,81	0/1:10,0:10:4.73:5,0,83	0/1:12,0:12:31.45:31,0,76	0/1:15,0:16:11.03:11,0,107	0/0:12,1:13:0.37:0,0,122	0/0:34,0:34:87.23:0,87,677	0/0:27,0:27:53.25:0,53,295	0/1:20,3:23:44.49:44,0,147	0/1:17,0:16:28.05:28,0,95	0/1:25,3:28:82.67:83,0,90	0/0:17,1:18:16.34:0,16,331	0/0:12,0:12:29.96:0,30,246	0/0:22,0:22:47.71:0,48,393	0/1:9,1:10:16.24:44,0,16	0/1:19,2:21:23.43:23,0,156	0/0:17,0:17:2.97:0,3,102	0/1:19,0:19:11.25:11,0,140
chr10	67187732	.	TGG	T	7167.69	PASS	AB=0.736;AC=38;AF=0.679;AN=56;BaseQRankSum=3.886;DP=464;FS=3.651;HRun=10;HaplotypeScore=89.5679;InbreedingCoeff=0.8260;MQ=73.34;MQ0=0;MQRankSum=-3.743;QD=21.79;ReadPosRankSum=3.751;VQSLOD=4.3958;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:33:68.46:0,68,903	0/0:1,0:1:3.01:0,3,48	0/1:18,0:19:5.12:5,0,302	0/0:16,0:17:24.31:0,24,358	0/1:1,1:13:5.72:6,0,58	1/1:2,22:24:48.12:534,48,0	1/1:1,16:17:32.83:346,33,0	1/1:9,13:23:56.73:569,57,0	1/1:1,10:11:24.05:267,24,0	1/1:4,12:16:36.07:392,36,0	1/1:1,10:11:24.04:267,24,0	1/1:3,11:14:30.08:334,30,0	0/0:5,0:6:11.99:0,12,141	1/1:2,7:9:21.05:232,21,0	1/1:3,9:12:24.04:261,24,0	1/1:3,9:12:24.06:267,24,0	0/0:20,0:23:58.11:0,58,730	1/1:0,24:24:60.16:668,60,0	1/1:3,18:21:54.09:575,54,0	1/1:5,10:15:7.11:307,7,0	1/1:2,20:22:45.11:502,45,0	0/0:19,0:20:41.61:0,42,605	0/0:12,0:12:36.08:0,36,478	0/0:22,0:22:53.79:0,54,786	1/1:3,10:13:33.08:366,33,0	1/1:4,14:18:45.12:501,45,0	1/1:0,16:16:36.10:401,36,0	1/1:6,12:18:33.08:367,33,0
chr10	67187741	.	GGT	G	2094.92	PASS	AB=0.959;AC=27;AF=0.482;AN=56;BaseQRankSum=11.229;DP=480;FS=4.340;HRun=0;HaplotypeScore=105.6860;InbreedingCoeff=0.1391;MQ=77.87;MQ0=0;MQRankSum=-2.363;QD=6.53;ReadPosRankSum=9.268;VQSLOD=1.9110;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:74.79:0,75,970	0/0:3,0:3:3.01:0,3,44	0/1:21,0:20:30.41:30,0,316	0/0:18,0:19:43.20:0,43,519	0/0:15,0:15:28.35:0,28,191	1/1:24,1:25:21.32:181,21,0	0/1:20,0:20:37.52:89,0,38	0/1:28,0:28:94.37:94,0,163	0/1:11,0:11:21.50:82,0,22	1/1:13,0:13:23.47:106,23,0	0/1:14,0:14:48.05:92,0,48	0/1:13,1:14:10.58:110,0,11	0/0:11,0:11:24.02:0,24,286	1/1:8,1:9:12.61:129,13,0	0/1:10,3:13:47.96:117,0,48	1/1:10,1:11:0.37:80,0,0	0/0:23,0:23:68.22:0,68,923	1/1:24,0:24:52.74:261,53,0	0/1:21,0:21:13.60:110,0,14	0/1:12,2:14:39.89:99,0,40	0/1:22,0:22:21.24:90,0,21	0/0:19,0:19:47.12:0,47,686	0/0:13,0:13:36.09:0,36,494	0/0:25,0:25:57.14:0,57,872	0/1:13,1:14:34.51:139,0,35	1/1:16,1:17:4.13:156,4,0	1/1:17,0:17:26.84:152,27,0	1/1:12,1:13:30.65:164,31,0
chr10	67187946	.	A	ACTCTGGACC	54216.67	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-5.597;DP=662;FS=0.364;HRun=0;HaplotypeScore=176.9142;InbreedingCoeff=0.9926;MQ=73.00;MQ0=0;MQRankSum=-16.177;QD=104.67;ReadPosRankSum=1.260;VQSLOD=5.3448;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:16,13:36:69.23:2864,69,0	1/1:1,3:6:12.04:544,12,0	0/0:30,0:30:75.24:0,75,1969	0/0:28,0:28:69.23:0,69,1814	1/1:5,8:14:21.07:986,21,0	1/1:6,14:20:57.20:2669,57,0	1/1:10,7:19:42.14:1706,42,0	1/1:17,9:32:90.28:3523,90,0	1/1:6,15:24:60.21:2633,60,0	1/1:5,9:17:48.11:1863,48,0	1/1:6,8:16:30.10:1434,30,0	1/1:8,18:31:81.28:3570,81,0	0/0:24,0:24:72.21:0,72,1926	1/1:12,23:39:99:4235,99,0	1/1:11,23:36:99:4509,99,0	1/1:9,22:35:93.32:4053,93,0	1/1:8,6:17:33.11:1509,33,0	1/1:4,8:14:30.10:1453,30,0	1/1:7,8:18:51.15:1887,51,0	1/1:5,7:16:39.09:1662,39,0	1/1:9,7:24:30.10:1405,30,0	0/0:23,0:23:66.23:0,66,1947	0/0:19,0:19:57.18:0,57,1629	0/0:20,0:20:51.17:0,51,1542	1/1:8,13:23:51.17:2298,51,0	1/1:11,18:34:96.32:4220,96,0	1/1:12,15:32:75.26:3451,75,0	1/1:5,8:14:39.13:1742,39,0
chr10	67188530	.	T	TGG	866.60	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-7.170;DP=552;FS=5.593;HRun=7;HaplotypeScore=89.1157;InbreedingCoeff=0.9915;MQ=92.02;MQ0=1;MQRankSum=-1.628;QD=27.95;ReadPosRankSum=-3.437;VQSLOD=2.8494;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:69.20:0,69,804	0/0:10,0:10:27.06:0,27,301	0/0:34,0:33:81.96:0,82,911	0/0:14,0:14:33.09:0,33,379	0/0:25,0:25:65.21:0,65,740	0/0:13,0:13:39.12:0,39,454	0/0:21,0:21:57.15:0,57,653	1/1:10,20:31:63.18:961,63,0	0/0:14,0:14:42.11:0,42,479	0/0:15,0:15:42.12:0,42,487	0/0:8,0:8:21.05:0,21,232	0/0:15,0:15:42.12:0,42,489	0/0:20,0:20:60.16:0,60,688	0/0:23,0:23:57.14:0,57,653	0/0:31,0:31:87.22:0,87,993	0/0:24,0:24:63.17:0,63,734	0/0:31,0:31:87.24:0,87,1000	0/0:27,0:27:72.16:0,72,821	0/0:14,0:14:33.08:0,33,382	0/0:9,0:9:24.02:0,24,255	0/0:18,0:18:45.10:0,45,503	0/0:17,0:17:42.12:0,42,489	0/0:15,0:15:36.10:0,36,419	0/0:23,0:23:48.12:0,48,559	0/0:14,0:14:39.11:0,39,454	0/0:24,0:24:60.16:0,60,691	0/0:23,0:23:63.17:0,63,723	0/0:11,0:11:30.09:0,30,350
chr10	67188880	.	T	TAC	8997.97	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=9.925;DP=415;FS=2.670;HRun=0;HaplotypeScore=84.9290;InbreedingCoeff=0.9109;MQ=60.05;MQ0=1;MQRankSum=-1.624;QD=29.99;ReadPosRankSum=7.737;VQSLOD=5.8050;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:14,10:24:32.79:568,33,0	1/1:1,4:5:6.02:99,6,0	0/0:18,0:17:39.03:0,39,441	0/0:13,0:11:26.57:0,27,258	0/0:15,0:15:45.13:0,45,559	1/1:5,15:20:33.11:544,33,0	1/1:1,7:9:12.04:197,12,0	0/0:36,0:36:69.19:0,69,823	1/1:2,7:9:15.05:247,15,0	1/1:1,10:11:30.08:440,30,0	1/1:3,8:11:9.03:148,9,0	1/1:3,14:17:36.12:594,36,0	0/0:10,0:10:24.04:0,24,265	1/1:5,6:11:0.14:230,0,0	1/1:2,12:14:27.09:444,27,0	1/1:0,10:10:24.08:381,24,0	1/1:1,15:16:39.13:643,39,0	1/1:3,17:20:45.15:743,45,0	1/1:6,10:16:30.03:450,30,0	1/1:3,9:12:11.24:427,11,0	1/1:1,12:15:21.07:347,21,0	0/0:9,0:9:27.09:0,27,344	0/0:9,0:9:27.09:0,27,343	0/0:4,0:4:12.04:0,12,153	1/1:2,14:17:39.13:637,39,0	1/1:3,17:20:25.16:602,25,0	1/1:6,14:20:30.10:495,30,0	1/1:2,21:23:48.12:763,48,0
chr10	67189332	.	A	AT	13089.72	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=-12.050;DP=521;FS=1.390;HRun=6;HaplotypeScore=44.1107;InbreedingCoeff=0.9898;MQ=77.28;MQ0=0;MQRankSum=-1.735;QD=32.00;ReadPosRankSum=5.163;VQSLOD=4.5268;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,27:29:72.23:906,72,0	1/1:1,6:7:15.05:189,15,0	0/0:13,0:13:23.96:0,24,228	0/0:9,0:9:17.25:0,17,159	1/1:1,23:24:66.17:812,66,0	1/1:1,21:22:54.17:679,54,0	1/1:0,9:9:18.06:226,18,0	0/0:36,0:36:93.19:0,93,936	1/1:1,16:17:45.14:566,45,0	1/1:1,21:22:63.18:769,63,0	1/1:1,12:13:36.12:453,36,0	1/1:1,13:14:39.12:491,39,0	0/0:17,0:17:42.08:0,42,421	1/1:2,9:11:27.09:340,27,0	1/1:0,18:18:45.14:566,45,0	1/1:2,20:22:51.16:642,51,0	1/1:0,21:21:63.20:793,63,0	1/1:2,15:16:36.12:453,36,0	1/1:5,14:19:45.07:500,45,0	1/1:2,20:22:57.18:717,57,0	1/1:6,21:27:57.18:717,57,0	0/0:8,0:9:23.06:0,23,212	0/0:22,0:22:63.14:0,63,643	0/0:6,0:6:15.03:0,15,153	1/1:2,30:32:84.27:1057,84,0	1/1:2,31:33:93.30:1170,93,0	1/1:0,17:17:48.15:604,48,0	1/1:2,11:13:36.11:442,36,0
chr10	67191075	.	A	ACGG	33957.34	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-13.894;DP=778;FS=3.389;HRun=0;HaplotypeScore=101.1248;InbreedingCoeff=0.9975;MQ=79.75;MQ0=0;MQRankSum=-8.282;QD=55.22;ReadPosRankSum=2.903;VQSLOD=6.9814;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,47:49:99:2766,123,0	1/1:1,11:12:33.03:677,33,0	0/0:23,0:23:66.09:0,66,1104	0/0:28,0:29:66.29:0,66,1185	1/1:2,11:15:18.06:406,18,0	1/1:2,23:27:60.16:1366,60,0	1/1:2,26:28:69.10:1629,69,0	1/1:9,23:33:87.28:1966,87,0	1/1:0,26:26:75.17:1669,75,0	1/1:2,29:32:87.30:1979,87,0	1/1:4,13:19:36.12:847,36,0	1/1:3,35:39:99:2193,99,0	0/0:32,0:32:90.28:0,90,1532	1/1:3,28:32:81.15:1760,81,0	1/1:1,31:33:81.19:1809,81,0	1/1:0,22:24:60.21:1416,60,0	1/1:2,25:29:63.22:1486,63,0	1/1:3,21:25:39.58:1276,40,0	1/1:1,20:22:63.20:1420,63,0	1/1:1,29:30:77.97:1734,78,0	1/1:3,51:57:99:2836,120,0	0/0:28,0:28:81.25:0,81,1362	0/0:17,0:17:51.16:0,51,872	0/0:34,0:34:96.33:0,96,1686	1/1:0,20:26:48.16:1135,48,0	1/1:3,22:25:75.26:1730,75,0	1/1:3,19:23:60.17:1363,60,0	1/1:1,8:9:21.07:496,21,0
chr10	67192619	.	CT	C	636.81	PASS	AB=0.835;AC=9;AF=0.161;AN=56;BaseQRankSum=0.865;DP=527;FS=17.197;HRun=13;HaplotypeScore=70.5311;InbreedingCoeff=0.4787;MQ=48.67;MQ0=27;MQRankSum=0.697;QD=5.26;ReadPosRankSum=2.917;VQSLOD=0.7108;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,16:19:9.69:235,10,0	1/1:1,6:7:11.92:87,12,0	0/0:17,0:6:5.83:0,6,44	0/0:16,0:2:5.59:0,6,33	0/1:22,3:23:20.66:21,0,300	0/0:21,0:20:48.03:0,48,449	0/0:12,0:12:29.82:0,30,265	0/1:13,8:20:26.52:136,0,27	0/0:17,0:17:30.04:0,30,288	0/0:26,0:26:42.05:0,42,402	0/0:12,0:13:21.76:0,22,191	0/0:21,0:20:36.45:0,36,325	0/0:21,0:21:38.98:0,39,350	0/0:16,0:13:20.96:0,21,183	0/0:18,0:15:6.44:0,6,187	0/0:11,0:10:20.97:0,21,189	1/1:15,23:34:18.48:299,18,0	0/0:13,0:12:32.84:0,33,290	0/0:18,0:19:32.59:0,33,275	0/0:27,0:27:38.99:0,39,360	0/1:7,1:8:6.99:7,0,81	0/0:15,2:17:11:0,11,241	0/0:18,1:19:13.84:0,14,269	0/0:12,1:15:0.08:0,0,180	0/0:25,0:22:36.04:0,36,340	0/0:23,0:22:41.80:0,42,369	0/0:20,0:20:44.68:0,45,385	0/0:11,0:8:17.94:0,18,156
chr10	67194653	.	AC	A	14726.31	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=13.513;DP=738;FS=5.058;HRun=4;HaplotypeScore=75.3290;InbreedingCoeff=0.9982;MQ=88.23;MQ0=0;MQRankSum=-4.073;QD=33.09;ReadPosRankSum=3.632;VQSLOD=5.5843;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:60,0:60:99:0,175,2381	0/0:15,0:15:42.14:0,42,588	0/0:24,0:24:63.19:0,63,854	0/0:33,0:32:88.45:0,88,1169	1/1:1,21:22:60.18:720,60,0	1/1:1,15:16:42.13:504,42,0	1/1:0,31:31:84.26:1008,84,0	0/0:30,0:29:84.25:0,84,1141	1/1:0,27:27:75.23:900,75,0	1/1:0,34:34:99:1162,99,0	1/1:0,17:17:48.11:560,48,0	1/1:0,24:24:69.21:828,69,0	0/0:15,0:15:45.12:0,45,596	1/1:2,24:26:66.20:789,66,0	1/1:0,24:24:72.22:864,72,0	1/1:1,21:22:57.17:684,57,0	0/0:29,0:29:87.22:0,87,1175	1/1:1,20:21:21.19:678,21,0	1/1:3,24:27:69.20:816,69,0	1/1:1,26:27:78.21:921,78,0	1/1:2,42:44:99:1536,129,0	0/0:19,0:19:57.19:0,57,798	0/0:16,0:16:45.15:0,45,630	0/0:52,0:52:99:0,144,2012	1/1:1,27:28:81.25:972,81,0	1/1:0,24:24:72.21:851,72,0	1/1:1,22:23:60.18:718,60,0	1/1:1,7:8:18.06:216,18,0
chr10	67197001	.	C	CT	19272.19	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-17.162;DP=726;FS=12.710;HRun=1;HaplotypeScore=62.8177;InbreedingCoeff=1.0000;MQ=90.81;MQ0=0;MQRankSum=-6.415;QD=41.99;ReadPosRankSum=3.603;VQSLOD=4.2846;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,102,1295	0/0:17,0:17:51.17:0,51,662	0/0:28,0:28:75.20:0,75,927	0/0:28,0:28:75.23:0,75,943	1/1:0,20:20:60.20:899,60,0	1/1:0,19:19:54.18:809,54,0	1/1:0,30:30:87.29:1304,87,0	0/0:41,0:41:99:0,105,1351	1/1:0,32:32:90.30:1349,90,0	1/1:0,23:23:69.21:1011,69,0	1/1:1,11:12:36.12:523,36,0	1/1:1,27:28:81.23:1189,81,0	0/0:32,0:32:90.28:0,90,1154	1/1:0,30:30:90.30:1349,90,0	1/1:1,44:45:99:1799,120,0	1/1:0,28:27:81.27:1214,81,0	0/0:22,0:22:63.20:0,63,815	1/1:0,26:26:69.23:1034,69,0	1/1:0,29:29:87.27:1262,87,0	1/1:1,17:18:48.16:719,48,0	1/1:1,40:41:99:1709,114,0	0/0:22,0:22:63.20:0,63,818	0/0:18,0:18:51.17:0,51,660	0/0:22,0:22:66.21:0,66,857	1/1:0,20:20:48.16:719,48,0	1/1:0,20:20:60.20:899,60,0	1/1:2,17:16:51.17:764,51,0	1/1:2,17:19:48.16:719,48,0
chr10	67198171	.	C	CTAGTTTTCTAGTTCCAGTCCCCA	3556.67	PASS	AB=0.759;AC=36;AF=0.947;AN=38;BaseQRankSum=-2.378;DP=46;FS=5.427;HRun=0;HaplotypeScore=39.8759;InbreedingCoeff=-0.1899;MQ=151.93;MQ0=0;MQRankSum=-1.877;QD=77.32;ReadPosRankSum=0.025;VQSLOD=2.1206;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,0:2:2.99:23,3,0	./.	0/1:4,1:9:47.34:1087,0,47	0/1:6,1:7:4.07:409,0,4	1/1:3,0:3:9.03:352,9,0	1/1:2,0:2:6.01:143,6,0	1/1:1,0:1:3:25,3,0	1/1:2,0:2:6.02:138,6,0	1/1:2,0:2:3.01:131,3,0	1/1:2,0:2:3.01:133,3,0	1/1:2,0:2:6.01:76,6,0	1/1:1,0:1:3.01:60,3,0	1/1:3,0:3:9.02:164,9,0	./.	1/1:1,0:1:3.01:50,3,0	./.	./.	1/1:1,0:1:2.99:24,3,0	1/1:1,0:1:3.01:200,3,0	./.	./.	1/1:3,0:3:9.01:125,9,0	./.	1/1:1,0:1:2.97:20,3,0	1/1:2,0:2:6.02:265,6,0	./.	1/1:1,0:1:3.01:133,3,0	./.
chr10	67199814	.	A	AT	11551.17	PASS	AB=1.000;AC=37;AF=0.661;AN=56;BaseQRankSum=-14.187;DP=578;FS=2.634;HRun=8;HaplotypeScore=48.3026;InbreedingCoeff=0.9096;MQ=72.55;MQ0=0;MQRankSum=-1.846;QD=27.77;ReadPosRankSum=4.191;VQSLOD=5.1225;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:63.01:0,63,573	0/0:11,0:11:33.02:0,33,302	0/1:14,0:14:10.64:11,0,107	0/0:7,0:7:10.54:0,11,82	1/1:1,26:27:75.22:866,75,0	1/1:1,17:18:42.12:485,42,0	1/1:3,16:19:45.13:519,45,0	0/0:39,0:39:99:0,102,924	1/1:3,23:26:63.19:727,63,0	1/1:6,28:34:84.25:970,84,0	1/1:1,26:27:78.15:882,78,0	1/1:2,15:17:36.11:415,36,0	0/0:13,0:13:30.01:0,30,275	1/1:2,13:15:39.12:449,39,0	1/1:2,24:26:72.21:831,72,0	1/1:1,22:23:57.17:658,57,0	0/0:28,0:28:74.99:0,75,672	1/1:2,20:22:54.16:623,54,0	1/1:3,21:24:63.15:705,63,0	1/1:2,21:23:66.19:757,66,0	1/1:2,12:14:30.09:346,30,0	0/0:14,0:14:11.45:0,11,277	0/0:15,0:15:42:0,42,379	0/0:10,0:10:24.01:0,24,219	1/1:7,24:32:67.44:765,67,0	1/1:4,12:16:39.12:449,39,0	1/1:4,30:34:84.25:969,84,0	1/1:2,3:5:11.99:124,12,0
chr10	67203838	.	T	TAC	1732.55	PASS	AB=0.852;AC=26;AF=0.500;AN=52;BaseQRankSum=-5.543;DP=638;FS=5.242;HRun=0;HaplotypeScore=91.7609;InbreedingCoeff=0.0760;MQ=65.00;MQ0=13;MQRankSum=0.890;QD=4.40;ReadPosRankSum=0.057;VQSLOD=2.2538;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:46:17.87:0,18,172	0/0:9,0:10:9.02:0,9,97	./.	./.	0/0:14,0:14:15.30:0,15,132	0/1:24,0:24:9.71:68,0,10	1/1:24,5:33:6.02:89,6,0	1/1:25,0:22:0.94:2,1,0	0/1:10,4:14:20.28:121,0,20	0/1:20,0:20:22.78:23,0,25	1/1:2,1:3:3.01:44,3,0	0/1:15,5:23:31.02:183,0,31	0/0:17,0:17:17.87:0,18,175	0/1:18,4:22:20.52:121,0,21	0/1:18,2:20:32.39:32,0,85	1/1:17,7:28:18.06:266,18,0	0/0:30,0:32:41.60:0,42,398	0/1:21,10:33:68.04:216,0,68	1/1:11,1:12:3.01:44,3,0	0/1:17,3:21:32.99:33,0,64	1/1:25,9:36:9.03:133,9,0	0/1:17,0:17:34.38:34,0,43	0/0:13,0:13:11.70:0,12,93	0/0:41,0:44:53.80:0,54,546	1/1:21,0:21:9.03:118,9,0	0/1:14,9:22:22:239,0,22	1/1:9,7:16:9.03:133,9,0	0/0:9,0:9:3.01:0,3,32
chr10	67204180	.	TAC	T	18037.78	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=16.072;DP=765;FS=0.559;HRun=0;HaplotypeScore=95.1294;InbreedingCoeff=0.9997;MQ=89.63;MQ0=2;MQRankSum=-7.248;QD=40.44;ReadPosRankSum=4.298;VQSLOD=6.8965;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,154,2915	0/0:18,0:18:54.16:0,54,1007	0/0:33,0:33:92.13:0,92,1632	0/0:31,0:31:84.29:0,84,1568	1/1:1,23:24:66.22:1011,66,0	1/1:1,19:19:51.17:781,51,0	1/1:0,22:22:51.17:781,51,0	0/0:35,0:35:99:0,105,1978	1/1:2,27:29:72.16:1071,72,0	1/1:0,27:27:81.28:1240,81,0	1/1:0,12:12:24.08:368,24,0	1/1:0,28:28:75.25:1149,75,0	0/0:26,0:26:78.27:0,78,1497	1/1:1,30:31:84.27:1265,84,0	1/1:2,44:46:99:1817,120,0	1/1:1,22:23:60.20:919,60,0	0/0:40,0:40:99:0,120,2318	1/1:0,20:20:54.18:820,54,0	1/1:0,21:21:63.20:939,63,0	1/1:0,16:16:42.14:643,42,0	1/1:2,22:24:63.21:965,63,0	0/0:29,0:29:84.29:0,84,1622	0/0:20,0:20:51.17:0,51,985	0/0:33,0:33:99:0,99,1912	1/1:0,30:30:72.24:1103,72,0	1/1:1,39:39:99:1696,114,0	1/1:1,21:22:63.21:965,63,0	1/1:0,11:11:33.11:505,33,0
chr10	67205942	.	G	GAA	5106.18	PASS	AB=0.967;AC=38;AF=0.679;AN=56;BaseQRankSum=-0.694;DP=516;FS=1.697;HRun=12;HaplotypeScore=106.7913;InbreedingCoeff=0.7901;MQ=48.85;MQ0=17;MQRankSum=-4.537;QD=14.76;ReadPosRankSum=2.187;VQSLOD=3.9641;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:34.83:0,35,253	0/0:5,0:5:5.92:0,6,55	0/1:84,0:25:6.58:7,0,102	0/0:81,0:21:23.70:0,24,157	1/1:14,7:22:30.14:564,30,0	1/1:9,2:11:32.66:276,33,0	1/1:10,2:12:26.82:251,27,0	0/0:13,0:20:16.90:0,17,72	1/1:7,0:7:6:61,6,0	1/1:14,5:20:36:402,36,0	1/1:19,6:25:57.13:598,57,0	1/1:5,1:8:3.97:103,4,0	0/0:6,0:6:14.97:0,15,134	1/1:6,1:7:14.31:114,14,0	1/1:7,4:12:29.52:331,30,0	1/1:5,5:10:14.78:158,15,0	0/0:19,0:19:41.10:0,41,325	1/1:6,4:10:17.52:192,18,0	1/1:16,2:20:49.48:469,49,0	1/1:8,3:14:34.96:330,35,0	1/1:3,1:5:8.93:81,9,0	0/0:5,0:5:10.06:0,10,54	0/1:13,0:13:4.06:4,0,153	0/0:9,0:8:14.93:0,15,137	1/1:11,0:14:34.29:250,34,0	1/1:7,7:14:27.53:358,28,0	1/1:14,5:19:35.54:380,36,0	1/1:11,0:11:20.59:179,21,0
chr10	67205965	.	AG	A	1601.29	PASS	AB=0.971;AC=37;AF=0.661;AN=56;BaseQRankSum=6.164;DP=514;FS=0.976;HRun=1;HaplotypeScore=101.1301;InbreedingCoeff=0.0981;MQ=51.16;MQ0=18;MQRankSum=-5.016;QD=3.48;ReadPosRankSum=5.842;VQSLOD=0.2082;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:15,2:16:6.71:93,0,7	0/1:6,0:6:4.53:5,0,34	0/1:98,7:28:5.25:5,0,236	0/1:101,5:22:22.36:22,0,92	1/1:19,1:20:27.61:141,28,0	1/1:10,3:13:1.50:146,2,0	0/1:7,1:8:15.78:20,0,16	0/0:21,0:20:53.94:0,54,631	1/1:4,0:4:7.97:26,8,0	0/1:13,0:13:32.58:33,0,104	1/1:16,3:19:9.97:155,10,0	0/1:8,0:8:17.43:17,0,20	0/0:7,0:7:20.84:0,21,226	1/1:4,0:4:10.94:53,11,0	0/1:9,0:9:19.78:44,0,20	0/1:9,0:8:6.57:39,0,7	1/1:15,2:17:11.04:119,11,0	1/1:7,1:8:4.78:85,5,0	1/1:16,4:19:31.45:223,31,0	1/1:14,1:15:37.40:198,37,0	1/1:3,0:3:2.50:9,2,0	1/1:7,0:7:11.63:52,12,0	0/0:17,0:16:44.90:0,45,452	0/0:9,0:9:23.07:0,23,261	0/1:14,0:14:9.65:85,0,10	0/1:9,0:9:41.60:42,0,47	1/1:20,1:20:2.40:93,2,0	1/1:5,0:5:13.65:71,14,0
chr10	67205966	.	GA	G	4498.97	PASS	AB=0.854;AC=43;AF=0.768;AN=56;BaseQRankSum=2.534;DP=526;FS=4.087;HRun=10;HaplotypeScore=96.3951;InbreedingCoeff=0.6465;MQ=51.31;MQ0=19;MQRankSum=-3.198;QD=12.39;ReadPosRankSum=3.742;VQSLOD=4.8217;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,11:16:17.08:304,17,0	1/1:2,4:6:8.98:78,9,0	0/0:103,0:28:24.15:0,24,189	0/1:102,2:23:21.23:21,0,80	1/1:7,14:21:33.26:328,33,0	1/1:11,3:14:32.98:258,33,0	0/1:6,2:8:15.09:44,0,15	0/0:25,0:23:54.08:0,54,563	1/1:1,3:4:12:104,12,0	1/1:9,5:14:17.75:143,18,0	1/1:9,10:19:47.65:398,48,0	1/1:1,6:7:11.99:104,12,0	0/0:7,0:7:18.05:0,18,198	1/1:0,4:4:12:103,12,0	1/1:2,7:9:20.99:182,21,0	1/1:4,5:8:17.99:156,18,0	1/1:4,15:19:37.08:347,37,0	1/1:5,4:9:13.07:147,13,0	1/1:11,10:20:45.69:391,46,0	1/1:7,9:16:41.95:362,42,0	1/1:1,2:3:2.99:26,3,0	1/1:1,6:7:14.99:130,15,0	0/0:17,0:16:33.09:0,33,365	0/0:9,0:9:24.06:0,24,265	0/1:11,4:15:7.43:186,0,7	1/1:3,6:9:17.97:153,18,0	1/1:6,15:20:47.81:404,48,0	1/1:0,5:5:15:129,15,0
chr10	67205988	.	GA	G	2005.84	PASS	AB=0.796;AC=34;AF=0.607;AN=56;BaseQRankSum=2.512;DP=464;FS=4.986;HRun=13;HaplotypeScore=91.7694;InbreedingCoeff=0.5015;MQ=57.70;MQ0=11;MQRankSum=-3.440;QD=6.75;ReadPosRankSum=1.416;VQSLOD=2.8589;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:15,1:15:30.03:0,30,283	0/1:7,1:8:0.84:1,0,154	0/1:67,1:19:7.26:7,0,82	0/0:59,1:16:9.01:0,9,60	1/1:8,9:19:36.31:237,36,0	0/1:6,7:13:7.94:112,0,8	1/1:4,3:7:2.93:22,3,0	0/0:27,1:28:31.01:0,31,399	1/1:2,6:8:11.87:87,12,0	1/1:1,10:11:3.64:189,4,0	1/1:7,14:21:35.65:262,36,0	1/1:2,2:4:2.94:22,3,0	0/0:7,0:7:15.01:0,15,140	1/1:2,3:5:5.91:44,6,0	1/1:3,5:8:11.90:87,12,0	1/1:3,3:6:4.98:28,5,0	0/0:17,0:18:29.86:0,30,267	1/1:4,5:9:14.86:109,15,0	1/1:11,13:25:34.49:277,34,0	1/1:6,15:21:6.49:210,6,0	1/1:3,2:5:8.22:64,8,0	0/0:7,0:8:18.67:0,19,151	0/0:14,1:14:8.61:0,9,241	0/0:12,0:12:22.73:0,23,185	0/1:9,6:15:2.71:135,0,3	0/1:6,2:8:4.83:38,0,5	0/1:12,6:18:1.07:166,0,1	1/1:4,10:14:1.61:93,2,0
chr10	67206812	.	CCAT	C	9659.14	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=6.466;DP=461;FS=26.458;HRun=0;HaplotypeScore=81.5983;InbreedingCoeff=0.9728;MQ=67.43;MQ0=0;MQRankSum=-5.002;QD=37.29;ReadPosRankSum=2.641;VQSLOD=3.5020;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:54.16:0,54,1159	0/0:11,0:11:30.10:0,30,680	0/0:17,0:17:48.14:0,48,944	0/0:29,0:28:74.12:0,74,1584	1/1:4,11:15:15.05:250,15,0	1/1:0,8:8:24.08:399,24,0	1/1:0,29:29:81.28:1348,81,0	0/0:11,0:11:30.10:0,30,680	1/1:2,12:14:33.08:520,33,0	1/1:3,11:14:33.11:549,33,0	1/1:0,3:3:6.02:100,6,0	1/1:2,18:20:51.17:849,51,0	0/0:16,0:16:48.16:0,48,1070	1/1:2,11:13:24.08:399,24,0	1/1:0,13:13:36.12:599,36,0	1/1:1,9:10:21.07:350,21,0	0/0:42,0:42:99:0,123,2768	1/1:2,24:26:63.17:1019,63,0	1/1:2,8:10:24.08:399,24,0	1/1:2,11:13:27.09:448,27,0	1/1:2,19:21:32.97:537,33,0	0/0:10,0:10:30.10:0,30,679	0/0:5,0:5:12.04:0,12,272	0/0:43,0:43:99:0,129,2849	1/1:3,11:14:24.08:400,24,0	1/1:0,9:9:27.09:446,27,0	1/1:0,20:20:48.16:799,48,0	1/1:2,5:7:15.05:249,15,0
chr10	67207615	.	TTTCTTTCTTTCTTTCTTTCCTTCC	T	7543.75	PASS	AB=1.000;AC=40;AF=0.769;AN=52;BaseQRankSum=4.648;DP=253;FS=9.353;HRun=0;HaplotypeScore=149.7151;InbreedingCoeff=0.6324;MQ=47.69;MQ0=11;MQRankSum=-2.127;QD=36.62;ReadPosRankSum=-4.642;VQSLOD=1.5385;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:10,0:9:23.76:172,0,24	1/1:2,0:2:6.01:69,6,0	./.	./.	1/1:15,0:15:39.02:583,39,0	1/1:9,0:9:24.08:674,24,0	0/0:5,0:3:2.88:0,3,15	0/1:21,0:16:61.75:175,0,62	1/1:15,0:15:33.11:735,33,0	1/1:9,0:8:24.08:571,24,0	1/1:1,15:16:20.98:230,21,0	1/1:10,0:10:27.02:496,27,0	0/0:5,0:5:15.05:0,15,806	1/1:2,0:2:6.02:133,6,0	1/1:5,0:5:9.02:149,9,0	1/1:8,0:8:10.24:198,10,0	1/1:10,0:10:17.20:154,17,0	1/1:14,0:14:33.10:587,33,0	1/1:3,0:2:6.02:126,6,0	1/1:1,14:14:24.01:306,24,0	1/1:11,0:11:24.04:393,24,0	0/0:5,0:5:15.05:0,15,566	0/0:7,0:7:16.30:0,16,675	0/0:25,0:25:66.20:0,66,4667	1/1:4,0:4:12.04:255,12,0	1/1:3,0:3:6.02:146,6,0	1/1:10,0:10:27.05:582,27,0	1/1:14,0:12:33.09:813,33,0
chr10	67207718	.	C	CAT	211.21	PASS	AB=0.889;AC=14;AF=0.500;AN=28;BaseQRankSum=-0.952;DP=166;FS=7.277;HRun=0;HaplotypeScore=45.4915;InbreedingCoeff=0.1757;MQ=76.02;MQ0=4;MQRankSum=1.129;QD=2.54;ReadPosRankSum=-0.686;VQSLOD=0.3963;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:6:2.99:0,3,23	1/1:1,0:1:3.01:38,3,0	./.	0/1:21,0:10:0:0,0,0	0/0:6,0:7:5.97:0,6,44	1/1:2,0:2:2.99:24,3,0	./.	0/0:20,0:18:6.42:0,6,42	./.	./.	1/1:4,0:4:3.01:44,3,0	./.	0/0:7,0:7:5.97:0,6,45	./.	./.	./.	0/1:20,0:19:43.23:43,0,164	0/1:17,0:16:7.89:51,0,8	./.	./.	./.	./.	./.	0/0:5,0:5:3.01:0,3,33	1/1:4,0:3:2.50:9,2,0	1/1:4,0:4:2.99:24,3,0	./.	0/1:2,7:9:2.69:81,0,3
chr10	67209617	.	TGATTTACAGACTTAACTG	T	4410.95	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.906;DP=584;FS=0.000;HRun=0;HaplotypeScore=282.9519;InbreedingCoeff=0.9968;MQ=83.39;MQ0=0;MQRankSum=-8.973;QD=88.22;ReadPosRankSum=3.402;VQSLOD=4.0651;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,18:26:39.13:1935,39,0	1/1:1,10:11:30.10:1548,30,0	0/0:19,0:19:48.63:0,49,2667	0/0:17,0:17:48.16:0,48,3364	0/0:37,0:37:99:0,111,8736	0/0:21,0:21:63.22:0,63,4702	0/0:19,0:19:54.19:0,54,4407	0/0:26,0:26:78.27:0,78,5339	0/0:15,0:15:42.14:0,42,3582	0/0:25,0:25:68.85:0,69,5196	0/0:18,0:18:54.19:0,54,4496	0/0:21,0:21:63.20:0,63,4646	0/0:22,0:22:63.22:0,63,5143	0/0:17,0:17:51.18:0,51,4168	0/0:25,0:25:72.25:0,72,5515	0/0:20,0:20:57.20:0,57,4438	1/1:6,7:13:18.06:929,18,0	0/0:25,0:25:72.23:0,72,5684	0/0:24,0:24:66.23:0,66,4890	0/0:21,0:21:60.21:0,60,4463	0/0:23,0:23:63.19:0,63,4554	0/0:12,0:12:33.11:0,33,2728	0/0:18,0:18:51.18:0,51,4157	0/0:16,0:16:45.15:0,45,3224	0/0:22,0:21:60.21:0,60,4481	0/0:40,0:40:99:0,120,9702	0/0:19,0:19:57.20:0,57,4708	0/0:12,0:12:36.12:0,36,2627
chr10	67210156	.	T	TAA	7182.99	PASS	AB=1.000;AC=45;AF=0.804;AN=56;BaseQRankSum=1.996;DP=441;FS=3.075;HRun=12;HaplotypeScore=90.3333;InbreedingCoeff=0.8353;MQ=45.16;MQ0=2;MQRankSum=-1.830;QD=19.05;ReadPosRankSum=-2.068;VQSLOD=3.9611;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,1:23:27.88:253,28,0	1/1:0,1:6:6.48:59,6,0	0/0:13,0:2:6:0,6,54	0/1:6,0:3:1.12:1,0,31	1/1:11,19:31:46.35:606,46,0	1/1:2,13:16:29.59:387,30,0	1/1:0,2:3:6.02:84,6,0	1/1:16,1:18:12.63:115,13,0	1/1:8,9:18:11.88:168,12,0	1/1:5,8:14:30.02:349,30,0	1/1:4,15:22:48.68:552,49,0	1/1:4,5:9:18.01:228,18,0	0/0:11,0:11:23.94:0,24,216	1/1:12,5:15:28.34:283,28,0	1/1:6,8:13:20.55:248,21,0	1/1:4,10:17:26.58:345,27,0	1/1:7,0:11:22.63:175,23,0	1/1:10,8:18:33.05:420,33,0	1/1:4,6:10:18.04:234,18,0	1/1:7,11:18:36.55:483,37,0	1/1:3,0:4:5.48:32,5,0	0/0:11,0:11:23.98:0,24,222	0/0:16,0:16:35.83:0,36,315	0/0:13,0:13:26.98:0,27,244	1/1:9,17:27:62.59:792,63,0	1/1:9,22:33:64.90:693,65,0	1/1:9,7:13:30.06:381,30,0	1/1:3,10:14:21.07:294,21,0
chr10	67210321	.	A	AG	2375.18	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=2.511;DP=612;FS=0.000;HRun=2;HaplotypeScore=70.2012;InbreedingCoeff=0.9965;MQ=80.92;MQ0=0;MQRankSum=-3.355;QD=36.54;ReadPosRankSum=3.011;VQSLOD=4.2343;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,31:31:78.26:1169,78,0	1/1:0,6:6:18.06:269,18,0	0/0:20,0:20:57.18:0,57,719	0/0:20,0:20:54.14:0,54,671	0/0:26,0:24:66.17:0,66,842	0/0:14,0:14:42.14:0,42,543	0/0:18,0:18:51.15:0,51,647	0/0:43,0:43:32.92:0,33,376	0/0:27,0:27:78.22:0,78,992	0/0:21,0:20:57.18:0,57,726	0/0:13,0:13:33.11:0,33,427	0/0:26,0:25:75.24:0,75,974	0/0:18,0:18:51.17:0,51,662	0/0:21,0:21:60.13:0,60,756	0/0:32,0:31:93.27:0,93,1185	0/0:27,0:27:78.25:0,78,1013	1/1:0,28:28:72.24:1079,72,0	0/0:22,0:22:60.17:0,60,762	0/0:23,0:23:60.18:0,60,763	0/0:18,0:18:48.16:0,48,621	0/0:33,0:33:96.31:0,96,1245	0/0:14,0:14:42.12:0,42,531	0/0:17,0:17:48.16:0,48,623	0/0:23,0:23:69.22:0,69,895	0/0:17,0:17:48.15:0,48,612	0/0:23,0:23:60.19:0,60,777	0/0:21,0:15:48.13:0,48,594	0/0:10,0:9:27.09:0,27,351
chr10	67210425	.	ACT	A	20399.99	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=15.925;DP=743;FS=0.291;HRun=0;HaplotypeScore=113.8668;InbreedingCoeff=0.9837;MQ=80.96;MQ0=3;MQRankSum=-4.545;QD=40.80;ReadPosRankSum=2.740;VQSLOD=6.6543;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,99,1903	0/0:3,0:2:6.02:0,6,116	0/0:25,0:25:75.24:0,75,1357	0/0:18,0:18:42.12:0,42,729	1/1:0,32:30:60.07:918,60,0	1/1:1,20:21:57.19:873,57,0	1/1:0,35:35:96.33:1470,96,0	0/0:31,0:31:90.29:0,90,1672	1/1:1,30:31:84.29:1287,84,0	1/1:0,24:24:72.22:1077,72,0	1/1:0,12:12:21.03:295,21,0	1/1:0,24:24:66.22:1011,66,0	0/0:34,0:34:96.29:0,96,1807	1/1:0,20:20:57.19:872,57,0	1/1:0,35:35:99:1516,99,0	1/1:0,19:19:51.17:781,51,0	0/0:31,0:31:84.29:0,84,1622	1/1:0,27:27:81.27:1234,81,0	1/1:1,21:21:63.21:961,63,0	1/1:1,20:18:45.15:689,45,0	1/1:2,62:64:99:2648,161,0	0/0:22,0:22:57.20:0,57,1092	0/0:18,0:18:54.19:0,54,1033	0/0:26,0:26:78.27:0,78,1498	1/1:0,25:22:63.21:956,63,0	1/1:0,35:35:99:1517,102,0	1/1:1,41:42:99:1790,117,0	1/1:0,11:11:33.11:505,33,0
chr10	67210514	.	C	CA	4417.33	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=1.323;DP=758;FS=1.304;HRun=2;HaplotypeScore=110.4238;InbreedingCoeff=0.9996;MQ=83.58;MQ0=0;MQRankSum=-1.747;QD=39.44;ReadPosRankSum=0.072;VQSLOD=4.4507;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,41:44:99:1804,114,0	1/1:2,10:12:27.09:417,27,0	0/0:25,0:25:56.02:0,56,756	0/0:25,0:25:61.50:0,62,754	0/0:5,0:27:72.03:0,72,414	0/0:20,0:20:59.74:0,60,781	0/0:27,0:27:78.21:0,78,1049	1/1:2,27:29:81.25:1238,81,0	0/0:21,0:21:57.18:0,57,777	0/0:22,0:22:54.06:0,54,699	0/0:25,0:25:72.03:0,72,942	0/0:29,0:29:84.24:0,84,1126	0/0:22,0:22:66.22:0,66,914	0/0:27,0:27:72.17:0,72,947	0/0:38,0:38:99:0,105,1427	0/0:23,0:23:66.21:0,66,902	1/1:1,26:27:60.20:958,60,0	0/0:28,0:28:81.15:0,81,1073	0/0:30,0:30:84.26:0,84,1127	0/0:22,0:22:57.14:0,57,767	0/0:49,0:49:99:0,144,1953	0/0:27,0:27:75.16:0,75,984	0/0:20,0:20:57.16:0,57,757	0/0:30,0:30:84.28:0,84,1168	0/0:32,0:31:90.17:0,90,1171	0/0:31,0:31:87.28:0,87,1194	0/0:35,0:34:99:0,99,1315	0/0:11,0:11:30.06:0,30,396
chr10	67210813	.	AGCCACT	A	746.21	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.195;DP=623;FS=8.238;HRun=0;HaplotypeScore=130.9079;InbreedingCoeff=0.9444;MQ=81.87;MQ0=0;MQRankSum=-5.150;QD=41.46;ReadPosRankSum=-2.117;VQSLOD=2.7625;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,108,3756	0/0:3,0:3:9.03:0,9,324	0/0:14,0:14:39.13:0,39,1291	0/0:21,0:21:57.11:0,57,1731	1/1:1,17:18:36.12:841,36,0	0/0:17,0:17:51.18:0,51,1823	0/0:33,0:33:93.32:0,93,3280	0/0:26,0:26:75.26:0,75,2600	0/0:25,0:25:72.23:0,72,2465	0/0:19,0:19:54.19:0,54,1837	0/0:23,0:23:69.24:0,69,2411	0/0:26,0:26:78.27:0,78,2692	0/0:26,0:26:78.25:0,78,2604	0/0:24,0:24:72.23:0,72,2399	0/0:21,0:21:63.22:0,63,2183	0/0:17,0:17:51.16:0,51,1755	0/0:34,0:34:99:0,99,3367	0/0:15,0:15:45.15:0,45,1622	0/0:18,0:18:54.17:0,54,1835	0/0:22,0:22:66.23:0,66,2267	0/0:52,0:52:99:0,150,5034	0/0:11,0:11:30.09:0,30,941	0/0:21,0:21:60.19:0,60,1946	0/0:23,0:23:69.22:0,69,2306	0/0:21,0:21:60.19:0,60,1972	0/0:25,0:25:75.26:0,75,2537	0/0:19,0:19:54.19:0,54,1934	0/0:11,0:11:33.11:0,33,1147
chr10	67211072	.	AT	A	15693.45	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=4.920;DP=467;FS=10.042;HRun=1;HaplotypeScore=49.1399;InbreedingCoeff=0.9908;MQ=75.40;MQ0=0;MQRankSum=-3.889;QD=38.94;ReadPosRankSum=1.558;VQSLOD=4.7984;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,25:25:72.17:983,72,0	1/1:0,5:5:12.04:168,12,0	0/0:9,0:9:27.09:0,27,416	0/0:9,0:9:24.08:0,24,368	1/1:0,30:30:87.29:1215,87,0	1/1:0,29:29:84.28:1175,84,0	1/1:0,10:10:24.08:336,24,0	1/1:0,29:29:87.28:1200,87,0	1/1:0,8:7:21.07:293,21,0	1/1:0,18:18:51.17:713,51,0	1/1:0,29:29:84.13:1126,84,0	1/1:0,17:16:42.14:587,42,0	0/0:11,0:11:33.11:0,33,527	1/1:0,10:10:24.08:335,24,0	1/1:0,21:21:57.06:797,57,0	1/1:0,11:11:30.10:419,30,0	1/1:0,18:18:45.15:629,45,0	1/1:0,22:22:63.21:878,63,0	1/1:0,14:14:42.14:585,42,0	1/1:0,16:16:48.09:647,48,0	1/1:0,15:15:45.15:629,45,0	0/0:8,0:8:24.08:0,24,379	0/0:17,0:17:51.17:0,51,799	0/0:10,0:10:30.10:0,30,479	1/1:0,19:19:48.16:671,48,0	1/1:0,25:25:75.25:1049,75,0	1/1:0,15:15:39.13:545,39,0	1/1:0,17:17:51.17:713,51,0
chr10	67211219	.	G	GT	5303.15	PASS	AB=0.739;AC=40;AF=0.714;AN=56;BaseQRankSum=-0.250;DP=527;FS=4.796;HRun=10;HaplotypeScore=70.8658;InbreedingCoeff=0.7373;MQ=64.22;MQ0=13;MQRankSum=0.212;QD=14.53;ReadPosRankSum=-0.864;VQSLOD=4.9404;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,25:35:6.76:267,7,0	1/1:5,4:9:17.98:183,18,0	0/0:44,0:10:11.86:0,12,65	0/0:29,0:11:10.36:0,10,62	1/1:9,14:22:36:346,36,0	1/1:7,8:15:33.08:345,33,0	1/1:0,5:5:9.02:96,9,0	0/0:37,0:38:25.93:0,26,364	1/1:10,0:8:10.84:101,11,0	1/1:4,21:25:56.17:537,56,0	1/1:10,3:13:20.87:190,21,0	0/1:8,2:9:3.32:102,0,3	0/0:9,0:9:22.99:0,23,175	1/1:2,8:10:1.19:29,1,0	0/1:9,11:19:13.19:111,0,13	1/1:2,5:7:9.02:96,9,0	1/1:7,23:29:21.84:348,22,0	1/1:8,18:25:26.10:251,26,0	1/1:7,12:19:23.39:420,23,0	1/1:6,16:22:48.10:492,48,0	1/1:2,6:8:3.48:33,3,0	0/0:10,1:11:16.37:0,16,183	0/0:17,0:17:41.95:0,42,344	0/0:13,0:13:26.71:0,27,221	1/1:9,14:24:26.95:249,27,0	1/1:4,16:20:22.66:411,23,0	1/1:14,7:22:35.02:495,35,0	1/1:1,11:12:20.84:204,21,0
chr10	67212915	.	A	AG	982.07	PASS	AB=0.751;AC=7;AF=0.125;AN=56;BaseQRankSum=-0.897;DP=517;FS=7.487;HRun=0;HaplotypeScore=62.0724;InbreedingCoeff=0.5400;MQ=63.67;MQ0=16;MQRankSum=3.291;QD=6.68;ReadPosRankSum=3.303;VQSLOD=2.3067;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,4:30:1.80:254,2,0	0/1:6,1:14:8.97:88,0,9	0/0:49,0:9:6.44:0,6,49	0/1:31,0:9:2.73:3,0,14	0/0:12,0:12:17.89:0,18,150	0/0:12,0:12:27.67:0,28,241	0/0:19,0:18:42.78:0,43,421	1/1:8,19:30:41.55:491,42,0	0/0:10,0:10:20.40:0,20,166	0/0:17,0:17:35.58:0,36,317	0/0:16,0:16:36.87:0,37,344	0/0:9,0:9:9.02:0,9,106	0/0:10,0:10:20.91:0,21,222	0/0:17,0:17:33.86:0,34,331	0/0:14,0:14:32.98:0,33,348	0/0:11,0:11:25.65:0,26,237	0/1:15,21:39:0.20:272,0,0	0/0:26,0:25:48.25:0,48,442	0/0:19,0:19:46.31:0,46,428	0/0:18,0:18:22.56:0,23,285	0/0:7,0:6:7.83:0,8,84	0/0:8,0:8:17.96:0,18,178	0/0:7,0:7:17.97:0,18,190	0/0:20,0:19:32.96:0,33,355	0/0:18,0:18:40.04:0,40,339	0/0:21,0:21:52.33:0,52,518	0/0:22,0:22:44.72:0,45,377	0/0:8,0:8:20.02:0,20,170
chr10	67214351	.	C	CA	1062.17	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-6.991;DP=669;FS=5.853;HRun=7;HaplotypeScore=61.0470;InbreedingCoeff=0.8592;MQ=81.94;MQ0=0;MQRankSum=-1.989;QD=27.24;ReadPosRankSum=-0.332;VQSLOD=4.2215;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:93.14:0,93,898	0/0:6,0:6:15.02:0,15,145	0/0:17,0:17:10.57:0,11,318	0/0:20,0:20:42.04:0,42,395	1/1:7,32:39:96.29:1157,96,0	0/0:33,0:32:90.14:0,90,869	0/0:15,0:15:42.05:0,42,399	0/0:29,0:29:63.07:0,63,604	0/0:18,0:18:48.07:0,48,464	0/0:31,0:31:90.13:0,90,866	0/0:28,0:28:84.14:0,84,811	0/0:23,0:23:60.08:0,60,574	0/0:23,0:23:60.08:0,60,573	0/0:24,0:24:66.09:0,66,631	0/0:26,0:26:72.09:0,72,689	0/0:23,0:23:60.09:0,60,579	0/0:18,0:18:51.05:0,51,485	0/0:22,0:22:57.09:0,57,550	0/0:23,0:23:60.08:0,60,575	0/0:32,0:32:90.12:0,90,863	0/0:13,0:13:33.05:0,33,319	0/0:24,0:24:72.10:0,72,690	0/0:18,0:18:51.03:0,51,478	0/0:24,0:24:66.10:0,66,637	0/0:34,0:34:96.14:0,96,921	0/0:35,0:35:99:0,99,956	0/0:32,0:33:89.17:0,89,846	0/0:2,0:2:6.01:0,6,58
chr10	67214833	.	A	ATT	29669.52	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-14.653;DP=706;FS=0.000;HRun=1;HaplotypeScore=71.1476;InbreedingCoeff=0.9989;MQ=84.17;MQ0=0;MQRankSum=-3.933;QD=52.89;ReadPosRankSum=1.390;VQSLOD=4.6568;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,36:39:99:1875,99,0	1/1:0,8:8:21.07:406,21,0	0/0:24,0:25:63.20:0,63,939	0/0:19,0:19:34.01:0,34,791	1/1:1,31:32:96.24:1738,96,0	1/1:1,30:31:87.26:1643,87,0	1/1:1,21:23:60.21:1156,60,0	1/1:3,32:36:99:1964,108,0	1/1:3,21:24:69.20:1292,69,0	1/1:2,31:34:99:1877,99,0	1/1:1,15:16:48.04:796,48,0	1/1:0,23:23:63.22:1216,63,0	0/0:31,0:31:90.30:0,90,1368	1/1:0,18:18:54.19:1043,54,0	1/1:3,25:29:75.22:1412,75,0	1/1:1,28:29:81.28:1563,81,0	1/1:2,19:23:60.21:1157,60,0	1/1:0,9:9:27.09:522,27,0	1/1:3,23:26:78.23:1466,78,0	1/1:1,22:23:69.19:1277,69,0	1/1:0,31:31:84.29:1623,84,0	0/0:30,0:30:87.30:0,87,1329	0/0:25,0:25:69.23:0,69,1056	0/0:15,0:15:45.15:0,45,687	1/1:0,21:21:57.20:1101,57,0	1/1:3,31:34:93.30:1760,93,0	1/1:1,32:33:90.31:1739,90,0	1/1:0,19:19:54.19:1044,54,0
chr10	67215803	.	T	TAA	4676.09	PASS	AB=0.577;AC=43;AF=0.796;AN=54;BaseQRankSum=-0.732;DP=348;FS=0.786;HRun=13;HaplotypeScore=50.6827;InbreedingCoeff=0.6549;MQ=65.08;MQ0=2;MQRankSum=1.326;QD=16.18;ReadPosRankSum=-2.247;VQSLOD=2.8295;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,1:36:31.98:196,32,0	1/1:2,1:3:7.82:70,8,0	0/0:21,0:10:0.92:0,1,23	0/0:13,0:7:5.80:0,6,53	1/1:4,4:11:13.33:116,13,0	1/1:2,8:11:27.08:349,27,0	1/1:0,4:4:12.04:163,12,0	1/1:10,0:29:19.50:137,19,0	1/1:1,4:6:17.54:209,18,0	1/1:1,5:7:15:156,15,0	1/1:6,1:7:6.13:92,6,0	1/1:2,9:12:21.07:279,21,0	0/0:13,0:13:26.95:0,27,238	1/1:1,10:11:18.06:244,18,0	1/1:3,9:12:17.84:223,18,0	1/1:4,5:10:18.05:232,18,0	0/1:8,2:30:24.29:165,0,24	1/1:4,5:9:4.61:116,5,0	1/1:6,16:23:47.07:551,47,0	1/1:4,6:12:17.89:159,18,0	1/1:1,4:5:9.03:122,9,0	./.	0/0:2,0:2:2.98:0,3,26	0/0:8,0:8:14.99:0,15,132	1/1:1,7:12:20.03:209,20,0	1/1:5,13:23:46.54:471,47,0	1/1:3,6:9:15.05:204,15,0	1/1:0,5:6:17.55:212,18,0
chr10	67216256	.	G	GT	1426.34	PASS	AB=1.000;AC=8;AF=0.143;AN=56;BaseQRankSum=-8.218;DP=530;FS=0.577;HRun=6;HaplotypeScore=51.6855;InbreedingCoeff=0.7239;MQ=76.80;MQ0=0;MQRankSum=-0.010;QD=18.29;ReadPosRankSum=0.914;VQSLOD=3.0307;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,11:12:30.10:377,30,0	1/1:1,11:12:33.11:415,33,0	0/1:20,0:20:23.31:23,0,199	0/1:8,0:8:9.04:9,0,15	0/0:23,0:23:63.12:0,63,635	0/0:20,0:20:54.12:0,54,551	0/0:18,0:18:51.11:0,51,520	0/0:35,0:35:99:0,99,1010	0/0:17,0:17:51.10:0,51,512	0/0:31,0:31:87.19:0,87,887	0/0:17,0:17:48.10:0,48,483	0/0:19,0:19:54.12:0,54,551	0/0:16,0:16:42.09:0,42,429	0/0:18,0:18:51.11:0,51,520	0/0:20,0:20:51.10:0,51,513	0/0:21,0:21:57.13:0,57,582	1/1:0,26:26:60.19:754,60,0	0/0:13,0:13:33.07:0,33,337	0/0:22,0:22:54.11:0,54,551	0/0:21,0:21:57.13:0,57,582	0/0:13,0:13:33.07:0,33,336	0/0:9,0:9:18.03:0,18,184	0/0:21,0:21:60.13:0,60,610	0/0:10,0:10:24.05:0,24,245	0/0:22,0:22:66.15:0,66,673	0/0:24,0:24:60.13:0,60,612	0/0:28,0:28:78.17:0,78,796	0/0:14,0:14:33.07:0,33,337
chr10	67218795	.	G	GC	2554.77	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-0.860;DP=593;FS=33.654;HRun=0;HaplotypeScore=84.3538;InbreedingCoeff=0.9990;MQ=78.70;MQ0=0;MQRankSum=-6.705;QD=39.30;ReadPosRankSum=-0.294;VQSLOD=1.3167;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,29:32:93.27:1337,93,0	1/1:0,8:8:24.08:383,24,0	0/0:23,0:23:55.58:0,56,819	0/0:11,0:12:35.79:0,36,432	0/0:25,0:25:75.23:0,75,1015	0/0:26,0:26:75.25:0,75,1047	0/0:13,0:13:39.12:0,39,530	0/0:34,0:34:99:0,99,1313	0/0:18,0:18:54.18:0,54,754	0/0:22,0:22:66.22:0,66,923	0/0:27,0:27:81.27:0,81,1129	0/0:22,0:22:66.21:0,66,906	0/0:20,0:20:60.20:0,60,838	0/0:16,0:16:48.16:0,48,670	0/0:21,0:21:63.21:0,63,876	0/0:28,0:28:81.25:0,81,1100	1/1:2,23:25:63.21:978,63,0	0/0:21,0:21:57.13:0,57,755	0/0:14,0:14:42.14:0,42,587	0/0:23,0:23:69.22:0,69,946	0/0:23,0:23:60.19:0,60,820	0/0:14,0:14:42.14:0,42,587	0/0:13,0:13:39.11:0,39,514	0/0:11,0:11:33.09:0,33,442	0/0:23,0:23:63.18:0,63,832	0/0:28,0:28:84.27:0,84,1160	0/0:38,0:38:99:0,114,1553	0/0:13,0:13:39.13:0,39,545
chr10	67218846	.	G	GA	18586.84	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-11.698;DP=601;FS=0.764;HRun=2;HaplotypeScore=62.1029;InbreedingCoeff=0.9986;MQ=75.67;MQ0=0;MQRankSum=-3.432;QD=39.38;ReadPosRankSum=1.894;VQSLOD=5.3686;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,44:48:99:1827,132,0	1/1:0,9:9:24.01:320,24,0	0/0:18,0:18:46.25:0,46,565	0/0:22,0:22:63.18:0,63,767	1/1:2,21:24:58.03:791,58,0	1/1:2,19:21:51.17:735,51,0	1/1:0,9:9:21.07:302,21,0	1/1:0,27:27:78.21:1051,78,0	1/1:0,12:12:33.11:475,33,0	1/1:0,19:19:57.19:821,57,0	1/1:2,19:21:57.15:797,57,0	1/1:0,11:11:33.11:475,33,0	0/0:25,0:25:75.24:0,75,930	1/1:0,18:18:48.16:691,48,0	1/1:2,13:15:39.13:562,39,0	1/1:0,24:24:72.24:1037,72,0	1/1:2,33:35:96.32:1381,96,0	1/1:1,22:23:63.21:907,63,0	1/1:0,15:15:45.13:627,45,0	1/1:0,18:18:51.13:711,51,0	1/1:0,42:42:99:1685,117,0	0/0:20,0:20:57.16:0,57,692	0/0:18,0:18:51.16:0,51,632	0/0:26,0:26:78.25:0,78,966	1/1:0,23:23:69.23:993,69,0	1/1:0,27:27:81.25:1145,81,0	1/1:1,17:18:48.16:691,48,0	1/1:0,13:13:39.13:562,39,0
chr10	67219983	.	T	TAC	2432.51	PASS	AB=0.993;AC=33;AF=0.635;AN=52;BaseQRankSum=1.491;DP=725;FS=1.838;HRun=0;HaplotypeScore=142.4728;InbreedingCoeff=0.4990;MQ=52.66;MQ0=12;MQRankSum=-2.067;QD=5.38;ReadPosRankSum=-0.260;VQSLOD=2.8852;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:26:8.90:66,9,0	1/1:12,0:12:14.81:116,15,0	./.	./.	0/0:32,0:32:11.30:0,11,77	1/1:16,1:17:17.90:136,18,0	1/1:26,0:26:11.97:97,12,0	0/0:36,0:34:13.94:0,14,104	1/1:28,0:28:8.02:54,8,0	1/1:30,0:30:21.46:289,21,0	1/1:16,0:16:5.84:35,6,0	1/1:28,0:27:25.26:239,25,0	0/0:34,0:34:43.74:0,44,385	1/1:18,0:18:8.66:73,9,0	0/1:28,1:28:14.13:14,0,26	1/1:33,1:34:29.66:253,30,0	1/1:17,0:16:3.58:77,4,0	0/1:10,0:10:5.77:93,0,6	0/0:15,0:9:3.81:0,4,70	0/1:19,0:18:13.63:62,0,14	1/1:42,2:43:29.80:282,30,0	0/0:29,0:29:23.87:0,24,296	0/0:20,0:20:21.02:0,21,210	0/0:46,0:46:32:0,32,442	0/1:27,0:27:6.35:190,0,6	1/1:28,1:29:8.68:205,9,0	1/1:27,0:27:10.12:223,10,0	0/1:14,0:14:11.99:114,0,12
chr10	67220020	.	A	ACACT	5251.20	PASS	AB=0.958;AC=29;AF=0.518;AN=56;BaseQRankSum=4.963;DP=711;FS=0.758;HRun=0;HaplotypeScore=175.2192;InbreedingCoeff=0.1368;MQ=47.62;MQ0=17;MQRankSum=-1.452;QD=10.24;ReadPosRankSum=-0.012;VQSLOD=4.4213;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:16:8.90:66,9,0	1/1:15,0:12:17.79:136,18,0	0/0:20,0:8:11.71:0,12,88	0/0:18,0:7:2.59:0,3,40	0/1:25,0:27:37.63:40,0,38	1/1:15,0:15:26.89:245,27,0	0/1:24,0:24:6.45:157,0,6	0/0:31,0:28:12.25:0,12,266	0/1:28,2:30:6.82:194,0,7	0/1:35,1:35:0.66:644,0,1	0/1:12,2:14:18.05:63,0,18	1/1:33,0:33:21.93:468,22,0	0/0:38,0:37:70.93:0,71,892	1/1:24,1:24:27.32:357,27,0	0/1:29,0:28:14.58:93,0,15	0/1:36,1:37:17.50:540,0,18	1/1:17,0:17:20.68:165,21,0	0/1:9,1:11:20.49:243,0,20	0/1:14,0:12:41.45:41,0,82	0/1:23,0:22:1.95:283,0,2	1/1:50,0:47:28.50:541,29,0	0/0:26,0:26:45.13:0,45,584	0/0:16,0:16:41.74:0,42,459	0/0:47,0:49:77.65:0,78,1060	0/1:21,0:23:18.30:274,0,18	1/1:25,0:25:12.12:299,12,0	0/1:29,0:29:1.09:266,0,1	0/1:15,0:14:28.79:135,0,29
chr10	67220064	.	A	ACT	16531.65	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-7.838;DP=852;FS=4.611;HRun=0;HaplotypeScore=121.7699;InbreedingCoeff=0.9687;MQ=55.26;MQ0=18;MQRankSum=2.853;QD=28.40;ReadPosRankSum=3.731;VQSLOD=6.0945;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,26:30:12.02:213,12,0	1/1:4,10:11:12.04:212,12,0	0/0:61,0:19:53.42:0,53,530	0/0:58,0:18:31.64:0,32,368	1/1:12,12:24:48.01:668,48,0	1/1:4,14:18:30.02:502,30,0	1/1:1,21:22:13.11:411,13,0	1/1:6,37:43:94.62:1383,95,0	1/1:1,32:33:65.66:1085,66,0	1/1:5,25:31:64.84:1039,65,0	1/1:3,8:11:18.06:319,18,0	1/1:3,40:43:68.79:1215,69,0	0/0:44,0:44:99:0,126,1489	1/1:3,28:31:63.20:1085,63,0	1/1:2,17:19:27.08:478,27,0	1/1:3,40:43:97.21:1687,97,0	1/1:6,13:19:45:723,45,0	1/1:2,11:13:14.41:220,14,0	1/1:2,9:10:27.07:383,27,0	1/1:1,23:25:57.08:994,57,0	1/1:20,41:58:69.18:1187,69,0	0/0:35,0:35:93.17:0,93,1148	0/0:23,0:23:57.08:0,57,668	0/0:47,0:48:99:0,126,1495	1/1:3,11:16:11.10:387,11,0	1/1:13,14:27:60.66:1031,61,0	1/1:3,28:31:53.87:938,54,0	1/1:1,14:14:21.07:371,21,0
chr10	67220164	.	TCA	T	497.35	PASS	AB=0.974;AC=11;AF=0.196;AN=56;BaseQRankSum=5.833;DP=858;FS=4.434;HRun=0;HaplotypeScore=159.1997;InbreedingCoeff=0.3279;MQ=47.48;MQ0=14;MQRankSum=3.886;QD=2.20;ReadPosRankSum=2.709;VQSLOD=2.6367;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:38,0:38:38.74:213,39,0	1/1:13,0:14:2.85:16,3,0	0/0:53,1:23:27.39:0,27,340	0/0:60,0:28:14.19:0,14,198	0/0:22,0:22:11.01:0,11,76	0/0:18,0:17:3.48:0,3,41	0/1:32,0:31:4.69:5,0,79	0/0:27,0:26:42.89:0,43,266	0/0:40,0:41:11.05:0,11,93	0/0:32,0:32:46.83:0,47,337	0/0:12,0:12:5.98:0,6,65	0/1:31,0:31:1.15:1,0,84	0/1:33,3:36:21.80:22,0,876	0/0:32,0:32:11.35:0,11,109	0/0:31,0:30:8.91:0,9,57	0/0:34,0:35:26.20:0,26,215	1/1:45,0:43:68.38:373,68,0	0/1:12,0:11:3.43:3,0,88	0/0:17,0:16:17.75:0,18,121	0/0:16,0:16:2.91:0,3,24	0/0:68,0:68:5.75:0,6,65	0/0:26,2:28:19.77:0,20,693	0/1:16,1:17:4.23:4,0,362	0/0:46,3:49:18.60:0,19,1104	0/0:25,0:25:16.88:0,17,131	0/0:28,0:27:28.29:0,28,177	0/0:23,0:23:5.35:0,5,110	0/0:9,0:9:3:0,3,25
chr10	67220191	.	CACAT	C	2505.07	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=2.106;DP=844;FS=2.259;HRun=0;HaplotypeScore=178.6371;InbreedingCoeff=0.9488;MQ=58.96;MQ0=6;MQRankSum=3.024;QD=24.32;ReadPosRankSum=2.466;VQSLOD=3.3794;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:32,13:45:69.28:1147,69,0	1/1:5,11:16:5.31:68,5,0	0/0:38,0:20:37.10:0,37,743	0/0:41,0:24:39.54:0,40,727	0/0:23,0:23:32.98:0,33,355	0/0:22,0:21:27.46:0,27,274	0/0:30,0:29:36.46:0,36,413	0/0:38,0:37:99:0,103,1045	0/0:38,0:37:46.27:0,46,484	0/0:33,0:33:84.81:0,85,1025	0/0:15,0:15:29.82:0,30,351	0/0:35,0:34:56.02:0,56,544	0/0:42,0:42:99:0,117,2154	0/0:32,0:31:59.60:0,60,623	0/0:26,0:24:32.75:0,33,357	0/0:38,0:38:86.21:0,86,867	1/1:5,37:40:71.22:1425,71,0	0/0:11,0:10:24.01:0,24,295	0/0:19,0:15:45.07:0,45,550	0/0:13,0:13:14.96:0,15,145	0/0:58,0:58:74.72:0,75,774	0/0:29,0:29:77.50:0,77,1548	0/0:20,0:20:57.01:0,57,941	0/0:45,0:45:99:0,114,2377	0/0:27,0:27:44.94:0,45,499	0/0:26,0:26:74.62:0,75,889	0/0:27,0:27:40.71:0,41,577	0/0:15,0:15:41.89:0,42,422
chr10	67221150	.	TACAC	T	4643.19	PASS	AB=0.946;AC=36;AF=0.692;AN=52;BaseQRankSum=5.066;DP=601;FS=11.685;HRun=0;HaplotypeScore=134.5858;InbreedingCoeff=0.6922;MQ=62.99;MQ0=14;MQRankSum=0.496;QD=12.06;ReadPosRankSum=1.155;VQSLOD=4.0523;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:38:11.92:0,12,233	0/0:7,0:8:5.03:0,5,120	./.	./.	1/1:6,8:17:21.06:291,21,0	1/1:11,8:18:12.51:189,13,0	1/1:21,4:30:1.70:244,2,0	0/0:24,0:24:21.07:0,21,411	1/1:8,3:13:3.34:147,3,0	1/1:16,11:29:29.74:374,30,0	1/1:13,8:21:21.04:329,21,0	1/1:11,1:14:12.03:150,12,0	0/0:4,0:7:11.51:0,12,164	1/1:17,8:28:27.07:349,27,0	1/1:18,9:28:20.73:309,21,0	1/1:7,10:19:17.35:392,17,0	0/0:28,0:28:36.01:0,36,554	1/1:8,6:15:7.01:287,7,0	0/1:17,1:18:7.25:41,0,7	1/1:14,10:24:24.55:348,25,0	1/1:27,8:34:21.05:307,21,0	0/0:22,0:23:41.88:0,42,881	0/1:16,1:17:23.05:23,0,381	0/0:27,0:32:46.85:0,47,899	1/1:11,7:17:12.04:175,12,0	1/1:16,3:19:9.02:130,9,0	1/1:7,7:15:26.95:372,27,0	1/1:1,4:5:12.04:188,12,0
chr10	67222564	.	TCA	T	297.79	PASS	AB=0.917;AC=12;AF=0.231;AN=52;BaseQRankSum=3.775;DP=653;FS=6.106;HRun=0;HaplotypeScore=82.0196;InbreedingCoeff=-0.2417;MQ=70.31;MQ0=22;MQRankSum=1.594;QD=1.24;ReadPosRankSum=1.327;VQSLOD=0.4061;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:30:7.24:0,7,55	0/0:3,0:8:3:0,3,26	./.	./.	0/1:15,10:26:13.78:223,0,14	0/1:16,2:18:3.01:3,0,290	0/1:19,0:19:5.92:6,0,312	0/0:24,0:24:12.20:0,12,71	0/0:12,0:12:15.05:0,15,225	0/1:21,2:23:48.07:48,0,160	0/1:19,2:21:13.73:14,0,375	0/0:16,0:16:30.10:0,30,433	0/0:20,1:21:12:0,12,521	0/0:14,0:14:16.92:0,17,214	0/0:24,0:24:9.10:0,9,483	0/1:15,1:16:32.76:33,0,157	0/0:14,0:16:17.95:0,18,148	0/1:16,1:18:39.95:40,0,323	0/1:15,0:15:1.38:1,0,210	0/1:27,4:31:19.87:20,0,231	0/1:22,2:24:9.10:9,0,222	0/0:14,0:14:8.99:0,9,110	0/0:24,2:25:37.77:0,38,424	0/0:31,1:32:0.53:0,1,673	0/0:20,0:20:33.03:0,33,385	0/0:14,0:14:16.20:0,16,147	0/1:22,4:26:28.80:29,0,364	0/1:3,0:3:1.96:2,0,2
chr10	67225393	.	T	TA	7153.75	PASS	AB=0.589;AC=38;AF=0.679;AN=56;BaseQRankSum=-5.870;DP=554;FS=2.620;HRun=12;HaplotypeScore=58.4843;InbreedingCoeff=0.6832;MQ=63.02;MQ0=0;MQRankSum=0.503;QD=16.37;ReadPosRankSum=2.381;VQSLOD=6.1133;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:10,33:42:62.31:728,62,0	0/1:3,5:8:3.87:128,0,4	0/0:10,0:10:10.98:0,11,79	0/0:9,0:8:10.08:0,10,64	1/1:8,28:37:12.19:560,12,0	1/1:1,18:19:39.06:379,39,0	1/1:2,9:13:24.60:205,25,0	0/0:33,1:35:47.31:0,47,496	1/1:10,7:17:29.68:249,30,0	1/1:9,14:22:33.04:315,33,0	1/1:1,16:17:44.97:418,45,0	0/1:6,20:26:17.76:316,0,18	0/0:18,0:20:39.76:0,40,269	1/1:3,9:11:26.94:250,27,0	1/1:6,11:16:5.24:212,5,0	1/1:6,14:21:44.81:409,45,0	1/1:2,18:20:36.05:346,36,0	0/1:5,16:21:1.87:308,0,2	0/1:7,13:22:7.19:246,0,7	1/1:5,20:26:7.11:379,7,0	1/1:1,9:9:21.03:204,21,0	0/0:9,0:10:21.73:0,22,140	0/0:12,0:12:26.82:0,27,195	0/0:20,0:20:44.72:0,45,328	1/1:3,20:23:45.07:438,45,0	1/1:5,19:25:53.87:495,54,0	1/1:3,19:22:45.07:436,45,0	1/1:7,7:14:14.89:132,15,0
chr10	67227271	.	A	AT	1138.54	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-6.879;DP=633;FS=1.302;HRun=8;HaplotypeScore=57.2557;InbreedingCoeff=0.9807;MQ=78.10;MQ0=0;MQRankSum=-0.859;QD=25.88;ReadPosRankSum=1.393;VQSLOD=4.4545;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,13:14:33.10:381,33,0	1/1:0,11:11:24.07:277,24,0	0/0:19,0:20:11.44:0,11,252	0/0:9,0:9:14.99:0,15,137	0/0:36,0:36:93.04:0,93,851	0/0:27,0:27:75.02:0,75,681	0/0:16,0:16:45.02:0,45,412	0/0:35,0:35:90.01:0,90,812	0/0:17,0:17:51.03:0,51,467	0/0:41,0:41:99:0,117,1065	0/0:30,0:30:84.03:0,84,765	0/0:21,0:21:60.03:0,60,549	0/0:24,0:24:68.98:0,69,616	0/0:24,0:24:66.01:0,66,595	0/0:32,0:33:95.07:0,95,853	0/0:26,0:26:75.04:0,75,686	1/1:1,18:19:54.16:623,54,0	0/0:21,0:21:62.79:0,63,548	0/0:17,0:17:35.99:0,36,325	0/0:30,0:30:81.04:0,81,741	0/0:13,0:13:32.98:0,33,294	0/0:17,0:17:51.01:0,51,462	0/0:25,0:25:69.04:0,69,631	0/0:15,0:15:39.02:0,39,357	0/0:19,0:19:48:0,48,435	0/0:41,0:41:99:0,105,957	0/0:23,0:23:57.02:0,57,522	0/0:9,0:9:26.95:0,27,233
chr10	67227762	.	T	TC	761.24	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=2.049;DP=431;FS=4.254;HRun=0;HaplotypeScore=54.1203;InbreedingCoeff=0.7648;MQ=57.45;MQ0=17;MQRankSum=2.513;QD=8.10;ReadPosRankSum=3.866;VQSLOD=2.7601;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,32:42:41.76:482,42,0	1/1:5,4:9:26.14:211,26,0	0/0:21,0:6:1.29:0,1,29	0/1:23,0:7:6.08:6,0,17	0/0:22,0:22:52.47:0,52,475	0/0:16,0:16:41.88:0,42,402	0/0:16,0:15:41.89:0,42,432	0/0:26,0:24:50.19:0,50,527	0/0:7,0:7:9.92:0,10,119	0/0:17,0:17:50.03:0,50,499	0/0:17,0:16:46.34:0,46,416	0/0:9,0:9:22.75:0,23,230	0/0:5,0:4:12.01:0,12,118	0/0:7,0:7:16.58:0,17,169	0/0:13,0:13:35.86:0,36,319	0/0:10,0:10:28.52:0,29,250	1/1:3,16:20:18.70:206,19,0	0/0:16,0:15:37.88:0,38,323	0/0:16,0:15:22.41:0,22,320	0/0:15,0:15:35.61:0,36,310	0/0:7,1:8:18.02:0,18,195	0/0:4,0:4:10.25:0,10,83	0/0:18,0:18:43.88:0,44,446	0/0:9,1:10:22.27:0,22,227	0/0:19,0:18:44.96:0,45,403	0/0:13,0:13:36.79:0,37,374	0/0:19,0:18:38.56:0,39,345	0/0:12,0:11:21.92:0,22,255
chr10	67232399	.	GA	G	8950.78	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=7.032;DP=576;FS=2.177;HRun=10;HaplotypeScore=57.8075;InbreedingCoeff=0.9040;MQ=62.27;MQ0=12;MQRankSum=-0.718;QD=19.37;ReadPosRankSum=0.976;VQSLOD=5.6682;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,32:38:76.97:650,77,0	1/1:1,12:13:29.99:260,30,0	0/0:18,0:3:6.01:0,6,62	0/0:17,0:8:0.66:0,1,70	1/1:2,22:24:59.98:519,60,0	1/1:0,17:17:47.99:417,48,0	1/1:2,12:14:29.99:260,30,0	1/1:3,23:26:68.77:598,69,0	1/1:6,12:17:27.87:236,28,0	1/1:2,16:18:47.95:409,48,0	1/1:4,20:24:53.98:468,54,0	1/1:0,13:13:32.99:287,33,0	0/0:17,0:17:42.11:0,42,465	1/1:1,10:11:20.99:181,21,0	1/1:5,17:22:38.97:339,39,0	1/1:1,21:22:47.80:417,48,0	1/1:3,23:26:42.01:431,42,0	1/1:0,12:12:32.99:287,33,0	1/1:7,27:30:44.82:604,45,0	1/1:0,26:26:68.98:598,69,0	1/1:2,4:6:14.99:128,15,0	0/0:13,0:13:33.09:0,33,364	0/0:21,0:20:54.14:0,54,592	0/0:28,0:27:66.18:0,66,727	1/1:3,26:29:68.98:599,69,0	1/1:4,26:30:77.98:677,78,0	1/1:4,25:29:53.97:469,54,0	1/1:3,7:9:6.77:118,7,0
chr10	67234663	.	A	AAGAGAGAG	7916.01	PASS	AB=0.923;AC=43;AF=0.827;AN=52;BaseQRankSum=-1.583;DP=699;FS=1.365;HRun=0;HaplotypeScore=194.6170;InbreedingCoeff=0.7133;MQ=58.52;MQ0=5;MQRankSum=-4.756;QD=14.14;ReadPosRankSum=-2.647;VQSLOD=3.8041;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:22:5.97:130,6,0	0/1:11,0:12:5.07:189,0,5	./.	./.	1/1:32,0:34:24.45:265,24,0	1/1:19,1:24:21.50:462,21,0	1/1:12,0:29:3.01:113,3,0	1/1:26,0:26:23.30:159,23,0	1/1:17,17:37:3.01:120,3,0	1/1:25,0:25:27.82:553,28,0	1/1:20,0:22:24.03:338,24,0	1/1:26,0:27:16.58:387,17,0	0/0:25,0:25:35.36:0,35,586	1/1:14,10:29:15.05:579,15,0	1/1:9,11:23:9.03:310,9,0	1/1:32,3:39:50.25:819,50,0	1/1:13,0:13:9.03:254,9,0	1/1:14,0:14:9.45:77,9,0	1/1:15,0:19:24.26:608,24,0	1/1:30,0:31:17.90:241,18,0	1/1:17,0:16:14.75:189,15,0	0/0:13,0:24:14.04:0,14,148	0/0:24,0:24:22.67:0,23,363	0/0:21,0:24:45.14:0,45,854	1/1:20,0:20:23.80:370,24,0	1/1:45,2:51:82.10:1550,82,0	1/1:20,0:36:8.66:103,9,0	1/1:6,0:5:8.80:99,9,0
chr10	67234696	.	A	AGAGAGAGG	4598.41	PASS	AB=0.975;AC=24;AF=0.429;AN=56;BaseQRankSum=4.243;DP=745;FS=1.243;HRun=0;HaplotypeScore=193.7709;InbreedingCoeff=-0.2945;MQ=55.36;MQ0=17;MQRankSum=-4.001;QD=8.36;ReadPosRankSum=0.570;VQSLOD=3.9821;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:6,12:25:11.12:190,11,0	1/1:13,0:12:8.57:188,9,0	0/0:36,0:19:26.40:0,26,307	0/1:46,0:9:10.28:10,0,40	0/1:36,0:36:99:114,0,155	0/1:23,0:21:92.54:235,0,93	0/0:27,0:27:20.95:0,21,172	1/1:37,0:37:33.18:494,33,0	0/1:29,0:29:77.92:78,0,169	0/1:26,0:25:99:126,0,273	0/1:22,0:21:70.09:214,0,70	0/0:27,0:27:13.10:0,13,250	0/0:27,0:27:62.11:0,62,973	0/1:24,0:24:99:454,0,135	0/1:19,0:19:79.76:241,0,80	0/1:32,0:32:45.95:517,0,46	0/1:3,11:18:5.94:293,0,6	0/1:11,0:11:34.81:35,0,81	0/1:20,0:19:99:284,0,185	0/1:29,0:29:91.28:91,0,195	0/1:23,0:22:99:103,0,157	0/0:30,0:29:37.50:0,37,412	0/0:20,0:20:47.82:0,48,678	0/0:27,0:27:66.12:0,66,1262	0/1:27,0:25:99:175,0,194	0/1:45,0:45:99:703,0,336	0/1:31,0:31:49.02:49,0,169	0/1:14,0:12:4.48:4,0,171
chr10	67234845	.	G	GA	15610.79	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-7.766;DP=737;FS=18.513;HRun=9;HaplotypeScore=73.6278;InbreedingCoeff=0.9808;MQ=73.40;MQ0=0;MQRankSum=-2.218;QD=25.85;ReadPosRankSum=0.769;VQSLOD=3.6260;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,30:33:84.23:929,84,0	1/1:1,14:15:42.11:465,42,0	0/0:14,0:14:29.97:0,30,260	0/0:12,0:12:21.85:0,22,180	1/1:2,20:23:60:645,60,0	1/1:7,30:37:69.19:763,69,0	1/1:2,19:21:28.09:538,28,0	1/1:7,30:37:61.15:885,61,0	1/1:4,26:29:69.19:763,69,0	1/1:7,33:40:88.18:964,88,0	1/1:4,25:29:75.16:816,75,0	1/1:1,26:27:69.19:763,69,0	0/0:31,0:31:68.93:0,69,590	1/1:5,21:26:60.16:664,60,0	1/1:3,28:32:81.05:877,81,0	1/1:4,23:27:66.18:730,66,0	1/1:1,18:19:57.15:626,57,0	1/1:1,11:12:30.08:332,30,0	1/1:6,15:22:24.91:486,25,0	1/1:5,24:29:69.12:738,69,0	1/1:11,28:39:9.07:785,9,0	0/0:26,0:26:62.97:0,63,544	0/0:28,1:29:38.79:0,39,566	0/0:21,0:21:50.98:0,51,443	1/1:0,18:18:45.12:498,45,0	1/1:7,37:48:99:1254,123,0	1/1:3,29:33:89.91:957,90,0	1/1:1,5:6:12.03:133,12,0
chr10	67237129	.	GT	G	385.34	PASS	AB=0.943;AC=4;AF=0.071;AN=56;BaseQRankSum=2.408;DP=642;FS=2.410;HRun=14;HaplotypeScore=80.3976;InbreedingCoeff=0.2663;MQ=72.17;MQ0=0;MQRankSum=0.073;QD=4.19;ReadPosRankSum=0.639;VQSLOD=1.6119;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:3,0:20:25.57:0,26,129	0/0:0,0:1:2.84:0,3,14	0/1:21,0:14:20.06:20,0,111	0/0:20,0:13:11.07:0,11,68	1/1:11,27:40:35.98:456,36,0	0/0:17,3:20:6.26:0,6,329	0/0:18,0:18:39.03:0,39,358	0/0:33,2:39:27.95:0,28,514	0/0:9,0:17:16.33:0,16,120	0/0:23,0:27:46.20:0,46,504	0/0:19,0:21:47.70:0,48,409	0/0:15,0:15:21:0,21,186	0/0:19,0:19:48.04:0,48,441	0/0:11,0:11:17.91:0,18,150	0/0:23,0:23:17.48:0,17,408	0/0:17,2:20:12.71:0,13,385	0/0:4,0:23:40.37:0,40,207	0/0:16,2:18:0.54:0,1,270	0/1:27,3:31:22.73:23,0,428	0/0:29,0:32:77.76:0,78,671	0/0:16,0:16:21.02:0,21,195	0/0:13,1:19:21.03:0,21,253	0/0:23,2:25:37.56:0,38,467	0/0:28,0:29:71.27:0,71,621	0/0:16,2:19:4.92:0,5,299	0/0:37,1:41:62.97:0,63,670	0/0:31,1:37:39.26:0,39,619	0/0:14,3:17:0.52:0,1,252
chr10	67239109	.	TTC	T	1992.74	PASS	AB=0.913;AC=41;AF=0.820;AN=50;BaseQRankSum=6.085;DP=406;FS=0.736;HRun=0;HaplotypeScore=99.5148;InbreedingCoeff=0.4346;MQ=63.96;MQ0=6;MQRankSum=-1.431;QD=7.12;ReadPosRankSum=-0.198;VQSLOD=3.2018;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,5:15:8.86:79,9,0	1/1:3,6:10:14.87:145,15,0	./.	./.	0/0:16,0:16:20.90:0,21,159	1/1:21,0:21:45.45:224,45,0	1/1:16,0:16:22.89:131,23,0	0/0:31,0:31:3.01:0,3,42	1/1:12,0:12:25.57:126,26,0	1/1:12,0:12:8.52:42,9,0	1/1:5,0:5:2.84:14,3,0	1/1:9,0:9:14.11:68,14,0	0/0:15,0:27:32.67:0,33,339	1/1:4,0:4:8.52:42,9,0	1/1:14,0:14:34.09:167,34,0	1/1:10,0:10:22.73:112,23,0	1/1:2,6:8:15.04:164,15,0	1/1:16,0:16:11.36:56,11,0	./.	1/1:13,0:13:19.89:98,20,0	1/1:8,0:8:5.68:28,6,0	1/1:4,7:11:15.04:164,15,0	0/1:14,0:15:22.79:23,0,225	0/1:12,0:16:28.80:31,0,29	0/1:14,0:14:41.40:41,0,171	1/1:21,0:21:34.52:168,35,0	1/1:13,0:13:22.73:112,23,0	1/1:16,0:15:22.73:112,23,0
chr10	67239111	.	C	CTT	2883.05	PASS	AB=1.000;AC=34;AF=0.607;AN=56;BaseQRankSum=4.777;DP=408;FS=5.183;HRun=2;HaplotypeScore=103.7793;InbreedingCoeff=0.6666;MQ=62.49;MQ0=7;MQRankSum=0.107;QD=11.17;ReadPosRankSum=-0.232;VQSLOD=0.4836;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:20.75:0,21,167	0/0:10,0:10:20.78:0,21,165	0/0:21,0:14:24.91:0,25,297	0/0:17,0:10:13.86:0,14,170	1/1:2,15:16:47.83:566,48,0	1/1:21,0:21:54.28:258,54,0	1/1:16,0:16:33.93:168,34,0	0/0:33,0:33:88.84:0,89,753	1/1:12,0:12:11.04:110,11,0	1/1:11,0:11:27.53:191,28,0	1/1:4,0:4:5.84:42,6,0	1/1:9,0:9:21.18:113,21,0	0/1:26,0:26:83.61:84,0,257	1/1:4,0:4:6.68:26,7,0	1/1:14,0:14:17.73:158,18,0	1/1:10,0:10:14.71:87,15,0	0/0:8,0:8:17.94:0,18,139	1/1:16,0:16:31.48:220,31,0	1/1:13,0:13:8.04:210,8,0	1/1:13,0:13:30.72:209,31,0	0/1:8,0:7:20.86:67,0,21	0/0:12,0:12:29.85:0,30,232	0/0:17,0:17:33.39:0,33,410	0/0:16,0:16:32.83:0,33,253	0/1:15,0:15:32.41:90,0,32	1/1:21,0:21:35.23:278,35,0	1/1:12,0:12:24.31:133,24,0	0/1:16,0:15:4.81:84,0,5
chr10	67239112	.	TC	T	959.57	PASS	AB=0.697;AC=19;AF=0.339;AN=56;BaseQRankSum=11.283;DP=403;FS=8.336;HRun=1;HaplotypeScore=92.7335;InbreedingCoeff=-0.0672;MQ=61.27;MQ0=8;MQRankSum=-2.998;QD=4.57;ReadPosRankSum=2.283;VQSLOD=0.2572;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:20.17:0,20,202	0/0:10,0:10:15.05:0,15,104	0/0:20,0:13:39.12:0,39,490	0/0:18,0:9:23.95:0,24,266	0/1:17,0:16:69.10:69,0,73	0/1:5,16:21:22.40:182,0,22	0/1:7,9:16:31.56:75,0,32	0/0:32,0:32:90.98:0,91,1118	0/1:4,7:12:17.78:68,0,18	0/1:6,4:10:35.33:35,0,69	0/1:2,2:4:5.70:13,0,6	0/1:3,6:9:32.11:62,0,32	0/0:25,0:25:57.62:0,58,704	1/1:1,3:4:8.20:42,8,0	1/1:2,11:14:11.89:155,12,0	1/1:2,8:10:1.85:60,2,0	0/0:8,0:8:13.19:0,13,69	0/1:12,4:16:42.75:43,0,73	0/0:13,0:13:27.89:0,28,178	0/1:7,7:13:40.15:53,0,40	0/0:6,1:6:3.73:0,4,69	0/0:12,0:12:28.23:0,28,246	0/0:17,0:17:42.05:0,42,563	0/0:16,0:16:26.33:0,26,320	0/1:13,2:15:2.31:2,0,179	0/1:9,12:21:79.36:95,0,79	0/1:5,8:13:12.05:124,0,12	0/1:7,7:13:46.03:46,0,47
chr10	67239114	.	TCTC	T	2023.61	PASS	AB=0.672;AC=17;AF=0.304;AN=56;BaseQRankSum=12.300;DP=408;FS=2.545;HRun=0;HaplotypeScore=103.6358;InbreedingCoeff=-0.0705;MQ=60.04;MQ0=9;MQRankSum=-2.539;QD=10.76;ReadPosRankSum=5.803;VQSLOD=2.8226;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:15.08:0,15,242	0/0:10,0:10:11.80:0,12,149	0/0:19,0:12:36.10:0,36,436	0/0:19,0:9:23.87:0,24,249	0/0:15,0:14:20.88:0,21,445	0/1:7,14:23:39.12:373,0,39	0/1:7,7:16:43.49:138,0,43	0/0:32,0:32:90.87:0,91,1167	0/1:6,6:13:28.89:167,0,29	0/1:6,4:10:72.82:73,0,87	0/1:3,2:5:24.06:25,0,24	0/1:4,6:10:40.15:141,0,40	0/0:25,0:25:57.66:0,58,996	1/1:1,3:4:9:84,9,0	1/1:3,11:14:13.24:312,13,0	0/1:2,0:10:0.30:87,0,0	0/0:8,0:8:17.39:0,17,114	0/1:10,4:14:72.75:73,0,99	0/0:14,0:13:29.01:0,29,200	0/1:7,7:13:52.13:146,0,52	0/1:6,1:6:16.13:16,0,69	0/0:14,0:14:38.45:0,38,412	0/0:18,0:18:39.42:0,39,782	0/0:16,0:16:6.85:0,7,293	0/0:14,0:16:38.68:0,39,622	0/1:9,11:21:85.03:242,0,85	0/1:5,7:13:18.70:185,0,19	0/1:7,6:13:51.08:130,0,51
chr10	67239285	.	TC	T	1540.08	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.983;DP=573;FS=3.764;HRun=2;HaplotypeScore=54.7140;InbreedingCoeff=0.9761;MQ=92.25;MQ0=0;MQRankSum=-3.294;QD=35.00;ReadPosRankSum=-3.897;VQSLOD=2.3170;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:54.16:0,54,787	0/0:5,0:5:15.04:0,15,206	0/0:23,0:23:69.23:0,69,995	0/0:26,0:26:73.40:0,73,1055	0/0:20,0:20:60.20:0,60,898	0/0:19,0:18:54.18:0,54,807	0/0:23,0:23:69.23:0,69,1034	1/1:0,44:44:99:1635,126,0	0/0:15,0:15:39.12:0,39,564	0/0:28,0:28:81.27:0,81,1211	0/0:17,0:17:48.16:0,48,719	0/0:19,0:19:54.14:0,54,782	0/0:25,0:25:72.23:0,72,1058	0/0:11,0:11:33.10:0,33,473	0/0:21,0:21:63.21:0,63,942	0/0:24,0:24:69.18:0,69,984	0/0:25,0:25:75.25:0,75,1121	0/0:8,0:8:21.06:0,21,295	0/0:13,0:13:39.11:0,39,563	0/0:27,0:27:81.27:0,81,1213	0/0:23,0:23:66.21:0,66,969	0/0:30,0:30:87.24:0,87,1253	0/0:22,0:22:57.19:0,57,853	0/0:13,0:13:33.11:0,33,494	0/0:19,0:19:54.18:0,54,809	0/0:20,0:20:60.19:0,60,879	0/0:28,0:27:78.26:0,78,1167	0/0:7,0:7:21.07:0,21,315
chr10	67239517	.	TAC	T	1227.95	PASS	AB=0.919;AC=40;AF=0.741;AN=54;BaseQRankSum=5.781;DP=464;FS=3.332;HRun=0;HaplotypeScore=66.6301;InbreedingCoeff=0.2069;MQ=75.05;MQ0=6;MQRankSum=0.594;QD=3.64;ReadPosRankSum=3.257;VQSLOD=1.7556;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:17:5.68:28,6,0	1/1:3,0:4:2.84:14,3,0	0/0:33,0:26:0:0,0,0	./.	1/1:13,0:19:8.44:42,8,0	1/1:11,2:13:6.01:65,6,0	1/1:13,3:17:11.86:111,12,0	0/0:23,0:22:1.25:0,1,3	1/1:7,3:10:5.80:65,6,0	1/1:18,3:21:6.01:65,6,0	1/1:9,5:14:9.02:97,9,0	1/1:5,3:7:6.02:65,6,0	0/1:11,1:12:17.41:17,0,119	1/1:4,1:8:8.69:60,9,0	1/1:10,1:11:3.01:32,3,0	1/1:16,4:21:11.86:111,12,0	1/1:19,0:25:13.50:69,13,0	1/1:12,2:14:6.01:65,6,0	0/0:12,0:12:0:0,0,0	1/1:11,2:13:3.01:32,3,0	0/1:14,0:14:23.40:23,0,54	0/0:16,0:17:9.92:0,10,272	0/0:19,0:19:15.03:0,15,197	0/1:35,4:39:98.73:99,0,295	1/1:9,3:12:6.01:65,6,0	0/1:16,2:19:32.88:66,0,33	1/1:9,1:10:3.01:32,3,0	1/1:10,4:15:14.87:144,15,0
chr10	67239984	.	G	GAGAAC	41895.54	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-11.490;DP=642;FS=3.755;HRun=0;HaplotypeScore=98.1661;InbreedingCoeff=0.9992;MQ=67.43;MQ0=0;MQRankSum=-7.009;QD=82.63;ReadPosRankSum=1.818;VQSLOD=6.9366;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,36:41:99:3286,102,0	1/1:0,15:16:45.15:1434,45,0	0/0:10,0:11:24.07:0,24,477	0/0:12,0:13:25.63:0,26,455	1/1:2,20:24:60.20:1697,60,0	1/1:3,20:24:57.19:1834,57,0	1/1:3,13:19:45.12:1328,45,0	1/1:9,14:30:87.24:2368,87,0	1/1:0,20:22:57.20:1896,57,0	1/1:0,23:25:75.24:2355,75,0	1/1:4,21:25:69.23:1929,69,0	1/1:5,25:32:87.30:2613,87,0	0/0:30,0:30:87.28:0,87,1981	1/1:5,17:28:66.22:1824,66,0	1/1:1,21:23:66.23:2133,66,0	1/1:3,17:22:60.20:1849,60,0	1/1:0,19:20:60.21:1905,60,0	1/1:1,9:11:30.10:964,30,0	1/1:0,11:13:36.12:1096,36,0	1/1:3,23:27:78.26:2319,78,0	1/1:3,20:24:60.21:1996,60,0	0/0:32,0:32:96.31:0,96,2169	0/0:22,0:22:63.22:0,63,1447	0/0:27,0:27:81.26:0,81,1766	1/1:3,14:17:51.17:1382,51,0	1/1:3,20:26:72.20:2206,72,0	1/1:4,20:24:66.23:2089,66,0	1/1:1,13:14:42.14:1390,42,0
chr10	67240086	.	TGA	T	12240.40	PASS	AB=0.951;AC=45;AF=0.804;AN=56;BaseQRankSum=11.460;DP=791;FS=3.887;HRun=0;HaplotypeScore=113.6899;InbreedingCoeff=0.8566;MQ=68.86;MQ0=1;MQRankSum=-1.596;QD=20.10;ReadPosRankSum=5.028;VQSLOD=5.0483;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,23:37:47.81:537,48,0	1/1:5,8:13:33.08:384,33,0	0/0:43,0:28:26.23:0,26,343	0/0:41,0:28:3.22:0,3,370	1/1:12,15:28:66.01:754,66,0	1/1:2,19:20:36.11:437,36,0	1/1:14,20:34:13.14:411,13,0	1/1:15,21:36:59.98:587,60,0	1/1:7,27:34:57.17:691,57,0	1/1:9,23:32:72.13:810,72,0	1/1:2,10:13:17.89:196,18,0	1/1:3,15:18:36.11:437,36,0	0/0:31,3:34:8.51:0,9,1086	1/1:4,19:23:42.13:509,42,0	1/1:2,27:30:60.01:705,60,0	1/1:6,22:28:39.12:473,39,0	1/1:2,19:21:48.15:582,48,0	1/1:3,16:19:20.14:451,20,0	1/1:8,10:18:30.05:325,30,0	1/1:4,26:32:62.81:703,63,0	1/1:7,22:30:41.96:487,42,0	0/1:37,2:39:4.23:4,0,1090	0/0:26,0:26:63.19:0,63,957	0/0:35,3:38:20.51:0,21,1251	1/1:5,23:28:48.15:582,48,0	1/1:7,24:31:78.15:918,78,0	1/1:12,19:31:75.11:857,75,0	1/1:1,12:13:33.10:400,33,0
chr10	67241301	.	T	TA	1553.63	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-7.788;DP=566;FS=3.430;HRun=8;HaplotypeScore=51.5060;InbreedingCoeff=0.9921;MQ=66.88;MQ0=0;MQRankSum=-3.383;QD=27.74;ReadPosRankSum=2.258;VQSLOD=4.2490;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,27:29:75.22:866,75,0	1/1:0,11:11:33.10:381,33,0	0/0:12,0:12:25.91:0,26,210	0/0:14,0:14:20.99:0,21,187	0/0:29,0:29:81.04:0,81,741	0/0:19,0:19:51.01:0,51,462	0/0:19,0:19:48.01:0,48,439	0/0:35,0:35:81.02:0,81,741	0/0:19,0:19:45.01:0,45,412	0/0:28,0:28:78.04:0,78,714	0/0:22,0:22:60.03:0,60,549	0/0:21,0:21:60.03:0,60,549	0/0:19,0:19:48.02:0,48,439	0/0:20,0:20:54.03:0,54,494	0/0:18,0:18:51.01:0,51,461	0/0:18,0:18:42.02:0,42,384	1/1:2,14:16:39.12:450,39,0	0/0:27,0:27:72.03:0,72,659	0/0:14,0:14:33.01:0,33,302	0/0:24,0:24:54.02:0,54,494	0/0:14,0:14:36.02:0,36,330	0/0:25,0:25:66.51:0,67,605	0/0:18,0:18:48.01:0,48,434	0/0:13,0:13:39.02:0,39,357	0/0:25,0:25:51.02:0,51,467	0/0:26,0:26:75.02:0,75,681	0/0:26,0:25:60.01:0,60,549	0/0:5,0:5:15.01:0,15,137
chr10	67241440	.	TCCTTCCTGCCTTCCTG	T	3818.77	PASS	AB=1.000;AC=37;AF=0.740;AN=50;BaseQRankSum=8.021;DP=660;FS=3.542;HRun=0;HaplotypeScore=290.9710;InbreedingCoeff=0.4962;MQ=63.84;MQ0=2;MQRankSum=-7.921;QD=8.16;ReadPosRankSum=1.001;VQSLOD=2.3209;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:24,18:42:3.01:115,3,0	1/1:10,0:10:9.03:260,9,0	./.	./.	0/0:24,0:24:45.06:0,45,1161	1/1:23,0:23:18.01:235,18,0	0/1:23,0:23:18.18:323,0,18	1/1:17,0:15:1.25:3,1,0	1/1:23,0:23:12.02:186,12,0	0/1:34,0:33:30.54:382,0,31	1/1:26,0:26:17.69:378,18,0	1/1:23,0:23:5.99:50,6,0	0/0:24,0:24:51.18:0,51,3092	1/1:17,0:17:12.03:207,12,0	1/1:33,0:31:20.51:245,21,0	1/1:26,0:26:11.83:164,12,0	1/1:13,1:14:9.03:190,9,0	1/1:26,0:26:9.01:119,9,0	./.	1/1:22,0:22:1.58:168,2,0	1/1:20,0:19:3.01:49,3,0	0/0:22,0:22:36.12:0,36,1819	0/0:15,0:15:19.88:0,20,935	0/0:48,0:48:75.26:0,75,4654	1/1:20,0:20:11.99:140,12,0	0/1:23,0:23:20.59:286,0,21	1/1:26,0:25:5.98:46,6,0	1/1:20,0:20:15.04:273,15,0
chr10	67241487	.	TGCCTTCCTGCC	T	13883.81	PASS	AB=0.799;AC=36;AF=0.643;AN=56;BaseQRankSum=11.130;DP=678;FS=4.955;HRun=0;HaplotypeScore=168.5025;InbreedingCoeff=0.4728;MQ=57.64;MQ0=11;MQRankSum=-1.134;QD=27.49;ReadPosRankSum=1.339;VQSLOD=4.1753;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:37,0:36:22.88:23,0,1002	0/1:10,0:11:99:227,0,420	0/0:12,0:6:12.89:0,13,90	0/0:15,0:8:8.60:0,9,195	0/1:32,0:32:99:645,0,511	0/1:2,19:21:3.43:643,0,3	1/1:29,0:31:22.58:1172,23,0	0/0:24,0:18:49.62:0,50,375	1/1:0,23:23:12.04:447,12,0	1/1:0,38:38:99:2264,110,0	1/1:1,27:28:50.88:1224,51,0	1/1:0,25:25:6.02:222,6,0	0/0:25,0:25:75.26:0,75,3225	1/1:0,20:20:12.04:446,12,0	1/1:2,33:33:21.07:764,21,0	1/1:0,28:28:11.86:446,12,0	0/1:14,0:15:99:120,0,657	0/1:2,22:24:12.57:320,0,13	1/1:11,0:9:2.39:294,2,0	1/1:0,20:20:39.10:954,39,0	1/1:18,0:18:32.68:608,33,0	0/0:28,0:28:81.28:0,81,2605	0/0:18,0:18:52.99:0,53,1620	0/0:48,0:48:99:0,141,5589	1/1:0,20:20:12.04:442,12,0	1/1:3,27:30:58.54:1847,59,0	1/1:0,20:20:5.83:217,6,0	1/1:0,16:16:15.05:558,15,0
chr10	67241495	.	TGCC	T	9587.29	PASS	AB=0.868;AC=34;AF=0.607;AN=56;BaseQRankSum=13.571;DP=693;FS=4.292;HRun=0;HaplotypeScore=115.1392;InbreedingCoeff=0.6689;MQ=57.74;MQ0=9;MQRankSum=-1.030;QD=21.31;ReadPosRankSum=3.300;VQSLOD=4.5899;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:38:54.13:0,54,1163	0/1:9,2:10:64.49:64,0,465	0/0:20,0:10:18.56:0,19,199	0/0:20,0:9:11.18:0,11,262	1/1:0,31:31:84.22:1497,84,0	0/1:21,0:21:0.56:227,0,1	1/1:3,29:32:36.13:1011,36,0	0/0:23,0:20:53.15:0,53,425	1/1:23,0:23:12.04:152,12,0	1/1:38,0:38:99:1651,100,0	1/1:28,0:28:44.91:923,45,0	1/1:25,0:25:6.02:89,6,0	0/0:29,0:29:87.30:0,87,2028	1/1:20,0:20:12.04:154,12,0	1/1:35,0:33:21.07:287,21,0	1/1:28,0:28:11.63:153,12,0	0/0:18,1:19:3.85:0,4,923	0/1:24,0:24:9.69:110,0,10	0/1:4,6:9:9.76:276,0,10	1/1:20,0:20:36.12:600,36,0	1/1:1,17:18:30.41:559,30,0	0/0:25,0:25:75.24:0,75,1623	0/0:19,0:19:55.42:0,55,1203	0/0:48,0:48:99:0,144,3364	1/1:20,0:20:12.04:180,12,0	1/1:29,1:30:59.28:1359,59,0	1/1:20,0:20:6.02:105,6,0	1/1:16,0:16:15.05:191,15,0
chr10	67241498	.	CTTCCT	C	521.98	PASS	AB=1.000;AC=6;AF=0.107;AN=56;BaseQRankSum=-1.513;DP=707;FS=0.965;HRun=0;HaplotypeScore=168.4580;InbreedingCoeff=0.5928;MQ=57.68;MQ0=8;MQRankSum=-2.532;QD=4.75;ReadPosRankSum=-2.468;VQSLOD=2.3982;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:41:67.02:0,67,1125	0/0:11,0:10:26.76:0,27,427	0/0:22,0:10:17.97:0,18,249	0/0:21,0:10:24.08:0,24,382	0/0:31,0:31:78.08:0,78,1130	0/0:21,0:21:1.05:0,1,2	0/0:32,0:32:57.13:0,57,827	1/1:18,5:21:44.15:614,44,0	0/1:23,0:23:0:0,0,0	0/0:38,0:38:80.96:0,81,1244	0/0:29,0:29:55.51:0,56,659	0/0:25,0:25:0.81:0,1,1	0/0:29,0:29:69.23:0,69,1345	0/1:20,0:20:0:1,0,0	0/0:36,0:34:5.48:0,5,68	0/1:28,0:28:0.01:0,0,0	0/0:20,0:20:51.65:0,52,888	0/0:24,0:24:3.46:0,3,24	0/0:11,0:10:24.07:0,24,356	0/0:21,0:21:29.63:0,30,397	0/0:19,0:19:32.78:0,33,467	0/0:24,0:24:60.19:0,60,1019	0/0:19,0:19:45.14:0,45,763	0/0:51,0:51:99:0,132,2657	0/0:21,0:21:4.64:0,5,56	0/0:30,0:30:68.22:0,68,982	0/0:20,0:20:2.25:0,2,5	0/1:16,0:16:0.05:0,0,0
chr10	67243753	.	CA	C	1642.54	PASS	AB=0.758;AC=35;AF=0.625;AN=56;BaseQRankSum=1.847;DP=452;FS=9.600;HRun=17;HaplotypeScore=52.0045;InbreedingCoeff=0.0530;MQ=56.79;MQ0=28;MQRankSum=-0.182;QD=4.12;ReadPosRankSum=2.243;VQSLOD=0.1305;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:5,18:25:6.91:139,0,7	1/1:1,5:7:13.26:84,13,0	0/0:16,0:6:5.01:0,5,28	0/0:16,0:8:8:0,8,61	0/1:9,7:18:14.30:67,0,14	0/1:13,4:21:9.43:104,0,9	1/1:7,11:19:9.91:136,10,0	0/1:15,2:17:2.11:2,0,140	0/1:6,12:18:8.91:44,0,9	1/1:11,8:20:27.20:142,27,0	0/1:6,3:5:12.78:38,0,13	0/1:7,8:15:9.31:52,0,9	0/1:10,0:10:0.31:0,0,76	1/1:4,6:11:10.60:56,11,0	0/0:8,0:9:10.02:0,10,93	1/1:7,5:14:23.59:117,24,0	0/1:15,10:25:39.04:39,0,108	0/1:13,5:13:9.62:56,0,10	0/1:12,8:22:32.56:92,0,33	1/1:5,2:8:15.47:71,15,0	1/1:3,8:10:14.48:81,14,0	0/1:12,0:12:4.36:4,0,88	0/1:17,3:20:22.96:23,0,169	0/0:11,0:8:8.46:0,8,64	1/1:6,4:10:13.69:72,14,0	1/1:7,13:19:18.79:193,19,0	1/1:5,5:14:3.41:94,3,0	1/1:6,8:13:7.65:105,8,0
chr10	67245623	.	C	CGTGTGTGTGTGT	11370.75	PASS	AB=1.000;AC=37;AF=0.661;AN=56;BaseQRankSum=-7.009;DP=781;FS=16.096;HRun=0;HaplotypeScore=240.6374;InbreedingCoeff=0.5380;MQ=46.53;MQ0=21;MQRankSum=-6.106;QD=21.02;ReadPosRankSum=-1.798;VQSLOD=2.0711;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:17,0:21:99:112,0,125	0/0:1,0:9:15.52:0,16,334	0/1:59,0:8:12.02:12,0,81	0/0:50,0:10:8.61:0,9,89	1/1:18,5:26:2.57:175,3,0	1/1:14,7:29:14.60:761,15,0	0/0:22,1:38:3.65:0,4,9	1/1:35,0:33:35.59:862,36,0	1/1:14,1:24:4.70:290,5,0	1/1:20,4:38:35.98:1349,36,0	1/1:8,2:18:5.95:193,6,0	1/1:17,5:26:17.01:816,17,0	0/0:42,0:44:83.83:0,84,2610	1/1:20,5:30:4.31:459,4,0	1/1:21,11:41:17.29:1105,17,0	1/1:16,10:37:32.93:1775,33,0	0/0:8,0:14:15.05:0,15,367	1/1:4,4:9:9.03:528,9,0	1/1:13,2:19:18:477,18,0	1/1:16,3:27:2.62:176,3,0	0/0:18,9:32:1.36:0,1,3	0/0:21,0:22:39.06:0,39,1142	0/0:29,0:31:57.16:0,57,1760	0/1:14,0:14:24.11:24,0,520	1/1:7,2:13:3.01:176,3,0	1/1:18,6:31:32.83:1068,33,0	1/1:21,5:33:14.16:848,14,0	1/1:10,0:10:6.02:166,6,0
chr10	67245756	.	A	ATTCTTCCCC	5171.86	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-5.405;DP=698;FS=3.021;HRun=0;HaplotypeScore=181.7147;InbreedingCoeff=0.9995;MQ=87.50;MQ0=0;MQRankSum=-8.825;QD=84.78;ReadPosRankSum=1.887;VQSLOD=5.2414;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,17:27:39.13:1867,39,0	1/1:0,14:14:36.12:1760,36,0	0/0:34,0:34:99:0,99,2561	0/0:31,0:31:84.22:0,84,2139	0/0:33,0:33:96.26:0,96,2739	0/0:15,0:15:39.12:0,39,1055	0/0:34,0:34:96.31:0,96,2680	0/0:19,0:19:57.15:0,57,1573	0/0:22,0:22:66.21:0,66,1874	0/0:29,0:29:87.28:0,87,2466	0/0:12,0:12:30.10:0,30,885	0/0:35,0:35:87.24:0,87,2352	0/0:41,0:41:99:0,117,3147	0/0:30,0:30:87.30:0,87,2647	0/0:28,0:28:84.29:0,84,2370	0/0:24,0:24:69.23:0,69,1848	1/1:4,9:19:36.12:1545,36,0	0/0:21,0:21:54.16:0,54,1601	0/0:37,0:37:99:0,105,2844	0/0:20,0:20:60.21:0,60,1779	0/0:24,0:24:60.19:0,60,1789	0/0:20,0:20:51.17:0,51,1444	0/0:27,0:27:81.28:0,81,2409	0/0:20,0:20:57.16:0,57,1609	0/0:28,0:28:81.24:0,81,2375	0/0:27,0:27:75.26:0,75,2124	0/0:14,0:13:39.09:0,39,975	0/0:12,0:12:30.10:0,30,906
chr10	67245913	.	ATGTGTGTG	A	332.60	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=2.820;DP=611;FS=0.000;HRun=0;HaplotypeScore=187.8866;InbreedingCoeff=0.5627;MQ=44.99;MQ0=19;MQRankSum=-2.230;QD=6.16;ReadPosRankSum=-2.305;VQSLOD=2.2672;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:22:2.70:0,3,24	1/1:9,0:9:3.95:54,4,0	0/0:15,0:4:12.04:0,12,184	0/0:21,0:7:17.97:0,18,291	0/0:22,0:24:18.07:0,18,230	0/0:24,0:22:30.56:0,31,539	0/0:28,0:25:35.10:0,35,588	1/1:11,13:23:17.94:376,18,0	0/0:12,0:12:15.05:0,15,287	0/0:22,0:20:46.90:0,47,806	0/0:18,0:18:19.54:0,20,258	0/0:20,0:20:17.38:0,17,178	0/0:24,0:23:42.11:0,42,901	0/0:22,0:20:20.51:0,21,328	0/1:21,0:19:18.41:18,0,206	0/0:12,0:12:20.22:0,20,382	0/0:23,0:22:3.64:0,4,61	0/0:12,0:11:24.08:0,24,421	0/0:20,0:19:24.41:0,24,426	0/0:22,0:22:33.03:0,33,561	0/0:41,0:38:37.02:0,37,690	0/0:21,0:21:42.11:0,42,865	0/0:25,0:25:51.17:0,51,1454	0/0:50,0:51:78.06:0,78,2125	0/0:28,0:25:16.40:0,16,239	0/0:24,0:22:55.68:0,56,1142	0/0:13,0:12:18.51:0,19,259	0/0:9,0:8:12.50:0,13,214
chr10	67246028	.	AT	A	2162.42	PASS	AB=0.679;AC=32;AF=0.571;AN=56;BaseQRankSum=0.290;DP=454;FS=0.585;HRun=15;HaplotypeScore=61.8729;InbreedingCoeff=0.3659;MQ=64.88;MQ0=15;MQRankSum=0.980;QD=6.86;ReadPosRankSum=3.507;VQSLOD=2.6450;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:12:0:0,0,0	0/0:7,0:6:0:0,0,0	0/0:11,0:10:5.03:0,5,30	0/1:13,0:9:3.12:3,0,41	1/1:8,6:17:31.94:189,32,0	1/1:11,8:19:14.43:88,14,0	1/1:7,13:20:31.47:198,31,0	0/1:7,6:14:21.79:104,0,22	1/1:3,14:17:29.42:192,29,0	1/1:8,9:19:28.05:177,28,0	1/1:9,7:17:31.95:181,32,0	0/1:4,7:11:1.51:78,0,2	0/0:17,2:18:32.77:0,33,257	1/1:5,3:7:11.75:76,12,0	0/1:6,10:16:7.85:70,0,8	1/1:1,11:13:5.25:153,5,0	0/0:13,0:12:0:0,0,0	0/1:12,9:22:20.94:79,0,21	0/1:7,5:13:9.54:66,0,10	1/1:6,10:20:29.94:174,30,0	1/1:4,9:15:21.74:127,22,0	0/0:17,1:18:19.63:0,20,281	0/0:19,0:21:23.22:0,23,295	0/0:31,4:35:38.67:0,39,302	0/1:4,11:17:0.70:115,0,1	1/1:8,12:20:8.11:172,8,0	0/1:4,6:10:6.06:46,0,6	1/1:0,4:5:7.95:44,8,0
chr10	67247059	.	C	CCTTTT	3853.39	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=5.237;DP=677;FS=1.705;HRun=0;HaplotypeScore=128.5544;InbreedingCoeff=0.9977;MQ=62.63;MQ0=2;MQRankSum=-10.023;QD=55.05;ReadPosRankSum=-0.572;VQSLOD=3.6868;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,28:39:96.07:2400,96,0	1/1:8,6:14:38.89:807,39,0	0/0:30,0:20:44.81:0,45,795	0/0:24,0:8:20.70:0,21,280	0/0:26,0:26:72.22:0,72,1368	0/0:28,0:28:78.27:0,78,1601	0/0:21,0:21:51.17:0,51,1019	0/0:26,0:26:63.08:0,63,1151	0/0:11,0:11:30.09:0,30,585	0/0:25,0:25:62:0,62,1099	0/0:20,0:20:51.17:0,51,991	0/0:24,0:24:57.15:0,57,1002	0/0:12,0:12:27.09:0,27,547	0/0:17,0:17:42.14:0,42,819	0/0:33,0:33:90.27:0,90,1702	0/0:20,0:20:51.15:0,51,982	1/1:12,5:17:35.93:646,36,0	0/0:27,0:27:75.24:0,75,1507	0/0:21,0:21:60.17:0,60,1059	0/0:42,0:42:99:0,111,2125	0/0:25,0:24:57.12:0,57,904	0/0:29,0:29:78.23:0,78,1471	0/0:34,0:34:96.30:0,96,1909	0/0:24,0:24:60.21:0,60,1241	0/0:24,0:24:69.20:0,69,1296	0/0:22,0:22:57.19:0,57,1137	0/0:23,0:23:69.19:0,69,1295	0/0:19,0:19:33.07:0,33,570
chr10	67247100	.	A	AC	2010.11	PASS	AB=0.923;AC=7;AF=0.125;AN=56;BaseQRankSum=3.507;DP=679;FS=1.158;HRun=2;HaplotypeScore=72.3257;InbreedingCoeff=0.9071;MQ=71.05;MQ0=5;MQRankSum=-6.362;QD=29.56;ReadPosRankSum=-0.876;VQSLOD=3.0373;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,34:34:81.28:1291,81,0	1/1:2,8:10:27.09:430,27,0	0/0:46,0:28:54.05:0,54,892	0/0:49,0:21:32.28:0,32,620	0/0:27,0:27:81.27:0,81,1133	0/0:23,0:23:69.23:0,69,963	0/0:26,0:26:78.25:0,78,1071	0/0:30,0:30:84.28:0,84,1175	0/0:7,0:7:21.07:0,21,293	0/0:22,0:22:60.20:0,60,839	0/0:24,0:23:69.23:0,69,965	0/0:19,0:19:57.19:0,57,796	0/0:18,0:18:54.18:0,54,750	0/0:14,0:14:42.14:0,42,587	0/0:32,0:32:93.31:0,93,1299	0/0:21,0:21:63.21:0,63,881	1/1:0,12:12:27.09:430,27,0	0/0:24,0:24:72.24:0,72,1007	0/0:21,0:21:54.18:0,54,755	0/0:30,0:30:90.30:0,90,1259	0/0:23,0:23:69.21:0,69,941	0/0:24,0:24:69.23:0,69,965	0/0:22,0:22:66.22:0,66,915	0/0:24,0:24:72.24:0,72,1007	0/0:23,0:23:69.22:0,69,949	0/0:28,0:28:84.26:0,84,1145	0/0:26,0:25:78.26:0,78,1091	0/1:11,1:12:0.41:0,0,422
chr10	67247261	.	GTTATGAATGCACA	G	2518.13	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=6.612;DP=636;FS=15.569;HRun=0;HaplotypeScore=228.8397;InbreedingCoeff=0.8636;MQ=86.46;MQ0=0;MQRankSum=-7.475;QD=28.94;ReadPosRankSum=0.199;VQSLOD=1.7005;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:10,21:31:30.10:1106,30,0	1/1:3,3:6:9.03:344,9,0	0/0:22,0:22:60.19:0,60,2719	0/0:36,0:36:84.23:0,84,4265	0/0:23,0:23:48.16:0,48,3044	0/0:23,0:23:42.13:0,42,2374	0/0:28,0:28:66.23:0,66,3774	0/1:26,0:26:2.86:3,0,2069	0/0:22,0:22:60.21:0,60,3724	0/0:35,0:35:87.77:0,88,5384	0/0:14,0:13:30.10:0,30,1796	0/0:24,0:24:66.23:0,66,4067	0/0:20,0:20:51.16:0,51,2969	0/0:29,0:29:66.23:0,66,4060	0/0:39,0:39:99:0,105,6457	0/0:28,0:28:72.25:0,72,4405	1/1:6,18:24:33.11:1204,33,0	0/0:14,0:14:33.11:0,33,2100	0/0:25,0:24:60.20:0,60,3451	0/0:16,0:16:48.16:0,48,2760	0/0:22,0:22:57.20:0,57,3616	0/0:18,0:18:39.13:0,39,2437	0/0:18,0:18:42.14:0,42,2459	0/0:21,0:21:57.20:0,57,3273	0/0:12,0:12:26.98:0,27,1221	0/0:20,0:20:48.16:0,48,2846	0/0:31,0:31:90.29:0,90,5482	0/0:9,0:9:18.06:0,18,1156
chr10	67247638	.	T	TAATA	3680.34	PASS	AB=0.780;AC=27;AF=0.614;AN=44;BaseQRankSum=-3.594;DP=254;FS=3.082;HRun=0;HaplotypeScore=40.9650;InbreedingCoeff=0.4705;MQ=30.48;MQ0=43;MQRankSum=-4.666;QD=21.91;ReadPosRankSum=-0.546;VQSLOD=2.5734;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:13:18.06:0,18,303	0/0:3,0:3:6.02:0,6,104	./.	./.	1/1:10,3:12:5.98:92,6,0	1/1:2,7:7:12.04:300,12,0	./.	0/1:16,3:10:33.95:318,0,34	1/1:6,4:10:6.02:149,6,0	1/1:13,7:16:27.09:628,27,0	1/1:4,2:6:3.01:72,3,0	1/1:1,3:3:9.03:183,9,0	0/0:3,0:3:9.03:0,9,156	./.	1/1:4,2:6:6.02:148,6,0	./.	0/0:25,0:15:30.10:0,30,508	0/1:8,5:12:40.12:216,0,40	1/1:7,5:7:15.05:339,15,0	./.	0/1:5,1:4:46.07:70,0,46	0/0:4,0:4:3.01:0,3,49	0/0:3,0:3:3.01:0,3,52	0/0:6,0:4:9.02:0,9,116	1/1:6,6:9:12.04:227,12,0	1/1:10,7:14:24.08:554,24,0	1/1:3,4:7:12.04:301,12,0	1/1:6,0:3:6.01:84,6,0
chr10	67247766	.	TA	T	4162.18	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-2.495;DP=307;FS=1.055;HRun=9;HaplotypeScore=36.0351;InbreedingCoeff=0.9189;MQ=66.66;MQ0=2;MQRankSum=1.695;QD=20.81;ReadPosRankSum=3.285;VQSLOD=3.7181;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:1,0:18:39.30:0,39,202	0/0:1,0:7:20.05:0,20,121	0/0:9,0:5:9.02:0,9,98	0/0:8,0:5:5.10:0,5,65	1/1:1,15:16:35.95:319,36,0	1/1:1,13:14:30.01:274,30,0	1/1:1,6:7:15.01:137,15,0	0/0:21,0:20:51.14:0,51,581	1/1:1,5:6:9:82,9,0	1/1:0,7:7:21.01:192,21,0	1/1:0,12:12:33.01:302,33,0	1/1:2,12:13:33.01:302,33,0	0/0:8,0:8:24.07:0,24,277	1/1:3,4:7:15.01:136,15,0	1/1:3,8:11:18:165,18,0	1/1:1,7:8:18.01:165,18,0	0/0:0,0:22:62.57:0,63,318	1/1:0,17:16:45.02:412,45,0	1/1:1,15:15:39:350,39,0	1/1:3,6:9:17.93:154,18,0	1/1:3,5:8:12:110,12,0	0/0:4,0:3:9.03:0,9,104	0/0:2,0:2:6.02:0,6,69	0/0:7,0:7:14.78:0,15,150	1/1:2,7:9:15.01:137,15,0	1/1:3,16:19:47.94:429,48,0	1/1:1,8:9:21.01:192,21,0	1/1:0,11:11:33.02:302,33,0
chr10	67249879	.	GCACA	G	245.09	PASS	AB=0.920;AC=6;AF=0.120;AN=50;BaseQRankSum=0.237;DP=523;FS=14.870;HRun=0;HaplotypeScore=108.4776;InbreedingCoeff=0.1679;MQ=72.56;MQ0=16;MQRankSum=2.681;QD=2.36;ReadPosRankSum=-0.217;VQSLOD=0.8373;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:28:11.89:0,12,185	./.	./.	0/0:55,0:32:0:0,0,1	0/0:12,0:12:6.02:0,6,107	0/0:19,0:17:5.70:0,6,95	0/0:29,0:29:24.02:0,24,321	0/0:11,0:10:6.02:0,6,113	0/0:17,0:16:12.49:0,12,172	0/0:12,0:12:6.02:0,6,110	0/0:4,0:4:6.02:0,6,137	0/0:21,0:21:24.03:0,24,379	0/0:22,0:21:27.08:0,27,538	0/0:13,0:13:11.96:0,12,160	0/1:26,0:26:11.10:11,0,460	0/1:20,0:21:15.96:16,0,281	0/0:19,0:20:12:0,12,148	0/0:25,0:24:36:0,36,574	0/0:10,0:10:9.01:0,9,133	0/0:9,0:9:9:0,9,139	0/0:37,0:36:23.95:0,24,301	0/0:6,0:7:9.03:0,9,151	1/1:5,4:9:6.02:93,6,0	0/1:20,18:38:5.19:215,0,5	0/0:10,0:10:12.51:0,13,235	0/0:13,0:13:15.02:0,15,182	0/1:10,0:10:24.88:25,0,82	./.
chr10	67249924	.	CAG	C	5104.72	PASS	AB=0.946;AC=36;AF=0.643;AN=56;BaseQRankSum=-2.667;DP=645;FS=0.000;HRun=0;HaplotypeScore=101.2898;InbreedingCoeff=0.4897;MQ=68.39;MQ0=21;MQRankSum=-1.324;QD=12.60;ReadPosRankSum=-0.293;VQSLOD=4.0687;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:33,0:32:24.79:266,25,0	1/1:7,0:7:17.83:124,18,0	0/0:55,0:27:57.05:0,57,660	0/0:54,0:30:70.99:0,71,786	1/1:17,0:17:17.95:142,18,0	1/1:15,1:16:20.89:162,21,0	1/1:28,3:31:50.55:590,51,0	0/0:26,0:25:68.97:0,69,634	0/1:16,0:16:1.71:98,0,2	1/1:16,0:16:35.97:312,36,0	1/1:15,0:15:0.69:138,1,0	0/1:16,2:18:6.83:232,0,7	0/0:18,0:18:35.89:0,36,402	1/1:12,1:13:3.61:162,4,0	0/1:26,1:27:75.96:238,0,76	1/1:31,0:31:40.19:418,40,0	1/1:21,0:21:31.12:298,31,0	0/1:25,3:27:58.49:419,0,58	1/1:11,0:10:8.40:146,8,0	0/1:9,1:10:33.40:91,0,33	1/1:44,0:43:49.43:615,49,0	0/0:19,0:19:29.74:0,30,229	0/0:20,0:20:31.78:0,32,190	0/0:48,0:47:81.84:0,82,607	0/1:17,0:17:8.47:148,0,8	1/1:20,0:19:38.84:305,39,0	1/1:12,0:12:10.49:177,10,0	1/1:2,0:1:2.99:24,3,0
chr10	67250071	.	GCA	G	12231.03	PASS	AB=0.933;AC=45;AF=0.804;AN=56;BaseQRankSum=6.270;DP=620;FS=3.196;HRun=0;HaplotypeScore=86.8042;InbreedingCoeff=0.8999;MQ=67.22;MQ0=6;MQRankSum=1.552;QD=25.43;ReadPosRankSum=3.270;VQSLOD=5.9718;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:19,17:36:7.58:588,8,0	1/1:1,7:8:21.07:260,21,0	0/0:35,0:24:30.71:0,31,444	0/0:35,0:28:27.04:0,27,584	1/1:4,19:23:54.17:669,54,0	1/1:5,21:26:60.19:744,60,0	1/1:6,17:25:44.80:512,45,0	1/1:16,20:36:57.74:726,58,0	1/1:3,11:14:36.11:446,36,0	1/1:3,16:19:42.13:519,42,0	1/1:7,7:14:33.07:382,33,0	1/1:3,15:18:42.13:521,42,0	0/0:17,0:17:45.15:0,45,737	1/1:4,12:16:45.14:558,45,0	1/1:4,14:18:36.11:446,36,0	1/1:2,21:24:63.03:758,63,0	1/1:4,23:27:60.19:744,60,0	1/1:3,27:30:55.74:769,56,0	1/1:5,9:13:27.05:311,27,0	1/1:6,19:24:54.17:669,54,0	1/1:4,15:19:42.13:521,42,0	0/1:13,1:14:4.09:4,0,454	0/0:21,0:21:42.14:0,42,688	0/0:30,1:31:32:0,32,985	1/1:0,14:15:41.96:497,42,0	1/1:1,21:22:63.20:780,63,0	1/1:6,16:22:51.14:619,51,0	1/1:9,5:14:15.05:186,15,0
chr10	67250166	.	GA	G	8201.43	PASS	AB=0.764;AC=44;AF=0.786;AN=56;BaseQRankSum=6.645;DP=503;FS=5.315;HRun=10;HaplotypeScore=64.1371;InbreedingCoeff=0.7522;MQ=74.90;MQ0=0;MQRankSum=-1.166;QD=18.85;ReadPosRankSum=0.503;VQSLOD=5.6734;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,28:33:71.98:625,72,0	1/1:0,5:5:12:104,12,0	0/1:21,1:21:5.59:6,0,227	0/0:6,0:6:4.74:0,5,62	1/1:7,17:25:54.25:451,54,0	1/1:1,13:14:38.98:339,39,0	1/1:2,6:8:17.99:156,18,0	1/1:10,23:33:68.53:563,69,0	1/1:0,11:11:26.99:234,27,0	1/1:3,9:12:5.50:205,6,0	1/1:2,19:21:50.97:442,51,0	1/1:0,12:12:29.99:260,30,0	0/0:25,1:26:46.13:0,46,730	1/1:4,13:17:35.99:313,36,0	1/1:3,22:24:23.79:436,24,0	1/1:2,14:18:49.02:399,49,0	1/1:4,16:20:14.81:357,15,0	1/1:11,13:24:50.97:442,51,0	1/1:3,17:20:50.99:442,51,0	1/1:1,21:22:62.86:536,63,0	0/1:4,12:16:66.55:175,0,67	0/0:8,0:8:21.04:0,21,224	0/0:13,0:13:39.10:0,39,426	0/0:15,0:15:35.93:0,36,379	1/1:1,18:19:44.85:390,45,0	1/1:6,10:16:38.98:335,39,0	1/1:1,22:23:65.99:573,66,0	1/1:1,18:19:47.99:417,48,0
chr10	67250295	.	TA	T	5573.93	PASS	AB=0.576;AC=40;AF=0.714;AN=56;BaseQRankSum=7.301;DP=552;FS=1.427;HRun=13;HaplotypeScore=65.2836;InbreedingCoeff=0.8031;MQ=75.18;MQ0=4;MQRankSum=-0.903;QD=13.50;ReadPosRankSum=3.500;VQSLOD=5.4163;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:32:50.91:149,51,0	1/1:2,0:11:18.33:54,18,0	0/0:24,0:19:17.79:0,18,154	0/0:15,0:9:0.43:0,0,34	1/1:3,28:31:71.41:518,71,0	1/1:3,11:15:28.87:203,29,0	1/1:1,12:15:33.90:231,34,0	0/0:31,0:31:62.93:0,63,575	1/1:1,7:8:17.90:131,18,0	1/1:5,15:20:38.10:269,38,0	1/1:2,30:32:86.47:635,86,0	1/1:3,18:22:40.78:291,41,0	0/0:15,1:16:23.22:0,23,377	1/1:1,13:15:35.77:263,36,0	1/1:5,20:25:50.67:372,51,0	1/1:5,20:25:30.36:380,30,0	1/1:0,0:18:34.63:102,35,0	1/1:2,9:11:26.83:197,27,0	1/1:5,11:16:34.78:244,35,0	0/1:7,11:20:15.53:210,0,16	1/1:5,7:12:17.86:131,18,0	0/0:11,0:11:30.04:0,30,288	0/0:21,0:21:47.95:0,48,434	0/0:20,0:20:44.99:0,45,424	1/1:4,11:15:20.85:153,21,0	1/1:5,18:24:26.64:343,27,0	0/1:4,19:24:2.62:300,0,3	1/1:2,19:22:55.73:400,56,0
chr10	67251312	.	C	CA	4133.91	PASS	AB=0.655;AC=29;AF=0.518;AN=56;BaseQRankSum=-5.596;DP=702;FS=7.559;HRun=14;HaplotypeScore=87.6047;InbreedingCoeff=0.2480;MQ=72.85;MQ0=0;MQRankSum=-0.036;QD=8.97;ReadPosRankSum=-3.813;VQSLOD=1.6752;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:54:54.84:0,55,462	0/0:10,0:10:14.67:0,15,96	0/0:21,0:21:31.75:0,32,194	0/0:14,0:13:8.76:0,9,57	0/1:16,14:30:14.91:242,0,15	0/1:5,16:22:41.22:163,0,41	0/1:9,6:16:37.63:104,0,38	1/1:11,2:26:43.26:244,43,0	0/1:10,20:30:38.33:175,0,38	1/1:9,20:29:9.81:322,10,0	0/1:9,10:21:20.92:182,0,21	1/1:5,11:18:3.72:169,4,0	0/0:32,0:34:40.06:0,40,255	1/1:4,9:14:11.82:88,12,0	0/1:13,14:27:7.33:176,0,7	1/1:3,25:30:21.73:332,22,0	0/0:46,1:49:40.17:0,40,466	0/1:8,5:13:1.38:98,0,1	1/1:14,15:31:11.37:348,11,0	0/1:7,14:22:29.50:241,0,29	1/1:6,24:33:43.15:424,43,0	0/0:25,1:27:16.43:0,16,228	0/1:15,2:18:22.80:23,0,121	0/0:29,0:31:56.99:0,57,356	0/1:3,16:20:2.54:225,0,3	0/1:8,16:28:4.45:277,0,4	1/1:6,17:23:20.99:159,21,0	1/1:2,5:8:17.83:143,18,0
chr10	67251456	.	TAA	T	4158.36	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=13.087;DP=688;FS=16.906;HRun=2;HaplotypeScore=84.9437;InbreedingCoeff=0.9982;MQ=88.58;MQ0=0;MQRankSum=-2.023;QD=44.71;ReadPosRankSum=3.296;VQSLOD=2.3942;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,54:54:99:2496,154,0	1/1:0,8:8:21.07:342,21,0	0/0:24,0:24:72.21:0,72,1402	0/0:30,0:29:52.79:0,53,1576	0/0:30,0:30:87.30:0,87,1767	0/0:16,0:16:48.15:0,48,917	0/0:25,0:25:75.26:0,75,1483	0/0:34,0:34:99:0,102,2026	0/0:22,0:22:66.23:0,66,1327	0/0:20,0:20:60.20:0,60,1175	0/0:22,0:22:66.23:0,66,1340	0/0:25,0:25:75.26:0,75,1524	0/0:25,0:25:75.26:0,75,1483	0/0:18,0:18:54.19:0,54,1076	0/0:28,0:28:84.27:0,84,1644	0/0:25,0:25:75.26:0,75,1525	1/1:0,31:31:81.28:1321,81,0	0/0:15,0:15:45.15:0,45,915	0/0:28,0:28:84.28:0,84,1662	0/0:27,0:27:81.28:0,81,1646	0/0:28,0:28:84.29:0,84,1693	0/0:17,0:17:51.18:0,51,1028	0/0:21,0:21:63.22:0,63,1272	0/0:32,0:32:93.30:0,93,1821	0/0:25,0:25:75.26:0,75,1499	0/0:24,0:24:72.25:0,72,1463	0/0:25,0:25:75.26:0,75,1519	0/0:9,0:9:27.09:0,27,548
chr10	67252947	.	CACAG	C	21655.70	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=12.755;DP=640;FS=2.028;HRun=0;HaplotypeScore=118.7009;InbreedingCoeff=0.9864;MQ=86.12;MQ0=1;MQRankSum=-7.114;QD=45.59;ReadPosRankSum=7.101;VQSLOD=5.3187;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,37:38:96.29:1755,96,0	1/1:0,6:6:15.05:280,15,0	0/0:25,0:25:51.74:0,52,1649	0/0:22,0:23:63:0,63,1559	1/1:4,22:26:57.20:1064,57,0	1/1:4,25:29:72.25:1343,72,0	1/1:4,17:21:48.16:895,48,0	0/0:27,0:27:63.22:0,63,1655	1/1:4,21:25:54.19:1008,54,0	1/1:2,27:29:84.29:1567,84,0	1/1:0,11:11:27.09:504,27,0	1/1:3,23:26:63.22:1176,63,0	0/0:14,0:14:36.12:0,36,959	1/1:1,17:18:45.15:840,45,0	1/1:1,25:26:63.22:1176,63,0	1/1:1,29:30:78.27:1455,78,0	1/1:1,37:38:81.21:1512,81,0	1/1:3,19:22:51.17:937,51,0	1/1:3,14:17:42.14:778,42,0	1/1:3,11:14:33.11:615,33,0	1/1:1,27:28:69.24:1288,69,0	0/0:25,0:25:66.23:0,66,1735	0/0:26,0:26:66.21:0,66,1667	0/0:25,0:25:75.26:0,75,1977	1/1:0,18:18:48.16:896,48,0	1/1:1,28:27:78.27:1456,78,0	1/1:1,17:18:51.17:945,51,0	1/1:0,6:6:9.03:168,9,0
chr10	67253311	.	G	GAGAGGGGGGAAGGGGAAA	841.98	PASS	AB=0.667;AC=13;AF=0.929;AN=14;BaseQRankSum=-1.739;DP=17;FS=3.424;HRun=0;HaplotypeScore=20.8560;MQ=129.64;MQ0=2;MQRankSum=-1.423;QD=60.14;ReadPosRankSum=0.474;VQSLOD=2.3304;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,0:1:3.01:95,3,0	./.	1/1:0,1:3:9.03:345,9,0	0/1:1,0:2:17.31:79,0,17	./.	./.	1/1:1,0:1:3.01:51,3,0	./.	./.	./.	./.	./.	./.	1/1:0,0:1:3.01:114,3,0	./.	./.	./.	./.	./.	./.	./.	./.	./.	1/1:3,0:3:6.01:121,6,0	./.	./.	1/1:1,0:2:3.01:113,3,0	./.
chr10	67253382	.	AACG	A	74.84	PASS	AB=0.708;AC=6;AF=0.231;AN=26;BaseQRankSum=3.621;DP=33;FS=9.098;HRun=0;HaplotypeScore=51.6860;InbreedingCoeff=0.1901;MQ=68.72;MQ0=0;MQRankSum=-0.396;QD=7.48;ReadPosRankSum=2.100;VQSLOD=0.7929;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:2,0:2:3.01:0,3,56	./.	./.	0/0:4,0:3:2.19:0,2,7	0/0:1,0:1:3.01:0,3,31	./.	0/0:5,0:5:15.05:0,15,280	./.	0/0:1,0:1:3.01:0,3,55	./.	./.	./.	./.	0/1:2,1:3:6.70:7,0,104	0/1:1,1:2:23.20:23,0,48	0/0:2,0:2:6.02:0,6,110	./.	./.	./.	./.	0/0:1,0:1:3.01:0,3,52	0/0:3,0:3:9.02:0,9,116	1/1:0,3:3:6.02:71,6,0	0/0:3,0:3:6.02:0,6,113	./.	./.	1/1:0,2:2:6.02:71,6,0	./.
chr10	67253393	.	AACAG	A	142.92	PASS	AB=0.694;AC=5;AF=0.156;AN=32;BaseQRankSum=3.706;DP=46;FS=8.104;HRun=0;HaplotypeScore=48.4882;InbreedingCoeff=-0.0168;MQ=87.91;MQ0=1;MQRankSum=-0.662;QD=10.99;ReadPosRankSum=1.701;VQSLOD=0.7857;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:2,0:2:6.02:0,6,107	./.	0/0:5,0:3:3.33:0,3,64	0/0:5,0:3:1.63:0,2,7	0/0:1,0:1:3.01:0,3,64	./.	0/0:5,0:5:15.05:0,15,325	./.	0/0:1,0:1:3.01:0,3,61	0/0:1,0:1:3.01:0,3,54	./.	0/0:1,0:1:3.01:0,3,39	./.	0/1:2,1:3:17.19:17,0,128	0/1:1,1:2:41.55:42,0,62	0/0:2,0:2:6.02:0,6,137	./.	./.	./.	./.	./.	0/0:4,0:4:12.04:0,12,264	1/1:1,3:3:6.02:96,6,0	0/0:3,0:3:9.03:0,9,173	0/0:2,0:2:6.02:0,6,106	./.	0/1:2,2:4:86.58:87,0,123	./.
chr10	67253404	.	GGGA	G	198.42	PASS	AB=0.813;AC=6;AF=0.143;AN=42;BaseQRankSum=3.443;DP=91;FS=15.258;HRun=0;HaplotypeScore=69.8980;InbreedingCoeff=-0.1868;MQ=85.77;MQ0=3;MQRankSum=-2.688;QD=8.27;ReadPosRankSum=1.637;VQSLOD=1.2502;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:8:10.66:0,11,201	./.	0/0:11,0:5:5.26:0,5,138	0/0:10,0:7:8.39:0,8,73	0/0:2,0:2:6.02:0,6,145	./.	0/0:8,0:8:16.92:0,17,327	0/1:4,0:4:8.66:9,0,35	0/1:2,0:2:5.98:6,0,14	0/0:3,0:3:8.77:0,9,146	./.	0/0:1,0:1:3.01:0,3,74	./.	0/1:3,1:4:42.52:43,0,135	0/1:1,1:2:41.09:41,0,68	0/0:3,0:3:8.98:0,9,167	0/0:2,0:2:5.99:0,6,88	0/0:1,0:1:3.01:0,3,43	./.	0/0:1,0:1:0.89:0,1,2	0/0:5,0:5:6.02:0,6,125	0/0:5,0:5:15.05:0,15,366	0/1:4,3:6:55.11:117,0,55	0/0:3,0:3:9.03:0,9,220	0/0:3,0:3:6.02:0,6,147	./.	0/1:3,2:5:90.07:90,0,135	./.
chr10	67253420	.	AGAGG	A	1455.93	PASS	AB=0.836;AC=22;AF=0.407;AN=54;BaseQRankSum=3.089;DP=228;FS=31.223;HRun=0;HaplotypeScore=99.9617;InbreedingCoeff=-0.4593;MQ=76.57;MQ0=5;MQRankSum=-5.276;QD=10.18;ReadPosRankSum=2.188;VQSLOD=0.9315;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:13,2:15:99:124,0,408	1/1:0,1:2:5.95:78,6,0	0/0:31,0:15:18.19:0,18,445	0/0:32,0:20:17.14:0,17,359	0/1:3,4:7:46.57:47,0,124	0/0:1,0:1:2.96:0,3,19	0/1:9,1:10:62.77:63,0,174	0/1:6,5:13:99:262,0,175	0/1:4,0:4:3.69:48,0,4	0/1:4,0:4:6.73:7,0,110	0/0:4,0:4:4.83:0,5,64	0/1:2,1:3:29.75:30,0,52	0/1:2,0:2:50.30:50,0,55	0/1:4,2:6:82.82:83,0,114	0/1:4,1:6:54.85:55,0,81	0/1:10,2:12:99:146,0,153	0/1:3,1:4:47.56:48,0,129	0/1:6,1:7:59.72:60,0,202	1/1:0,1:1:3.01:60,3,0	0/0:2,1:3:6.01:0,6,73	0/1:13,0:13:34.92:35,0,250	0/0:7,1:9:21.54:0,22,577	0/1:9,4:12:99:172,0,299	0/1:6,2:8:40.04:40,0,151	0/1:3,1:4:47.65:48,0,121	./.	0/1:7,2:9:99:155,0,207	0/0:2,0:2:3.01:0,3,59
chr10	67253422	.	A	AG	1676.55	PASS	AB=1.000;AC=38;AF=0.704;AN=54;BaseQRankSum=-1.117;DP=246;FS=0.000;HRun=6;HaplotypeScore=100.3672;InbreedingCoeff=0.4189;MQ=74.50;MQ0=6;MQRankSum=1.036;QD=11.56;ReadPosRankSum=1.316;VQSLOD=1.9467;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:4.48:0,4,84	0/0:3,0:3:3.59:0,4,9	0/0:34,0:15:31.21:0,31,225	0/0:34,0:21:2.71:0,3,176	1/1:4,3:7:6.57:109,7,0	1/1:1,1:2:3.01:38,3,0	1/1:7,3:10:6.89:118,7,0	1/1:11,3:14:1.75:173,2,0	1/1:3,0:4:3.72:43,4,0	1/1:2,2:4:11.24:108,11,0	1/1:1,3:4:6.02:74,6,0	1/1:2,1:3:5.28:56,5,0	0/1:2,0:2:0.28:0,0,26	1/1:4,2:6:9.95:109,10,0	1/1:5,2:7:6.77:62,7,0	1/1:6,7:14:19.53:190,20,0	0/1:4,0:4:8.19:8,0,8	1/1:2,6:8:14.34:162,14,0	0/0:2,0:2:1.55:0,2,4	1/1:3,1:4:8.68:73,9,0	1/1:4,7:13:14.97:222,15,0	0/0:9,0:9:21.04:0,21,209	0/1:14,0:13:5.54:6,0,108	0/1:9,0:9:4.17:4,0,54	1/1:2,3:5:6.96:90,7,0	./.	1/1:4,5:9:7.71:150,8,0	1/1:0,2:2:3.01:38,3,0
chr10	67253424	.	G	GA	564.40	PASS	AB=0.944;AC=33;AF=0.589;AN=56;BaseQRankSum=1.070;DP=265;FS=0.657;HRun=0;HaplotypeScore=108.6667;InbreedingCoeff=0.3391;MQ=72.77;MQ0=6;MQRankSum=-1.466;QD=4.38;ReadPosRankSum=3.339;VQSLOD=3.4572;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:1.55:0,2,228	0/0:3,0:3:2.70:0,3,7	0/0:36,0:15:32.28:0,32,338	0/0:35,0:21:17.87:0,18,230	1/1:9,0:9:7.52:39,8,0	1/1:2,0:2:2.68:11,3,0	0/1:9,2:11:23.84:57,0,24	0/1:14,0:14:3.30:42,0,3	1/1:4,0:5:6.34:22,6,0	1/1:5,0:5:11.07:58,11,0	1/1:4,0:4:5.42:26,5,0	1/1:4,0:4:8.24:43,8,0	0/1:2,0:2:4.39:4,0,36	1/1:7,0:7:8.74:52,9,0	0/1:6,1:7:18.51:25,0,19	1/1:14,0:14:15.84:97,16,0	0/0:6,0:5:0.79:0,1,52	1/1:8,0:8:14.54:60,15,0	0/0:3,0:3:3.89:0,4,29	1/1:4,0:4:4.01:21,4,0	0/1:14,0:14:3.13:55,0,3	0/0:9,0:9:21.07:0,21,291	0/0:14,1:14:4.81:0,5,162	0/0:11,0:11:1.39:0,1,135	1/1:6,0:6:4.47:33,4,0	1/1:1,0:2:0.47:1,0,0	1/1:8,1:9:3.17:71,3,0	1/1:2,0:2:2.74:12,3,0
chr10	67253426	.	G	GA	320.04	PASS	AB=0.974;AC=20;AF=0.357;AN=56;BaseQRankSum=-1.376;DP=279;FS=15.480;HRun=0;HaplotypeScore=106.8973;InbreedingCoeff=-0.1548;MQ=73.00;MQ0=7;MQRankSum=1.424;QD=2.39;ReadPosRankSum=2.878;VQSLOD=1.7532;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:15.81:0,16,308	0/0:3,0:3:7.99:0,8,48	0/0:38,0:17:34.14:0,34,345	0/0:42,0:23:5.36:0,5,228	0/1:10,0:10:31.83:32,0,48	1/1:2,0:2:2.74:12,3,0	0/1:9,2:11:30.58:50,0,31	0/1:14,0:14:26.92:27,0,64	0/1:5,0:5:3.82:4,0,12	0/1:4,0:5:10.10:46,0,10	0/1:4,0:4:11.52:14,0,12	0/1:4,0:4:12.01:13,0,12	0/0:3,0:3:6:0,6,66	0/1:7,0:7:22.17:22,0,35	0/1:7,0:7:2.62:3,0,45	0/1:14,0:14:28.52:40,0,29	0/1:7,0:6:2.25:2,0,70	0/1:8,0:8:7.93:30,0,8	0/0:4,0:4:8.99:0,9,76	0/1:4,0:4:1.97:6,0,2	0/1:15,0:15:4.53:70,0,5	0/0:9,0:9:21.04:0,21,290	0/0:14,1:14:23.81:0,24,208	0/0:11,0:11:21.47:0,21,194	0/1:6,0:6:23.19:23,0,29	0/0:2,0:2:5.86:0,6,35	0/1:8,1:9:1.23:65,0,1	1/1:2,0:2:2.74:12,3,0
chr10	67257184	.	A	AAAC	6157.64	PASS	AB=0.941;AC=33;AF=0.589;AN=56;BaseQRankSum=4.273;DP=527;FS=18.324;HRun=0;HaplotypeScore=86.8695;InbreedingCoeff=0.8719;MQ=49.45;MQ0=50;MQRankSum=1.877;QD=20.32;ReadPosRankSum=4.850;VQSLOD=2.7958;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:30:85.84:0,86,673	0/0:8,0:7:14.83:0,15,106	0/0:30,0:3:5.99:0,6,52	0/0:29,0:9:14.51:0,15,72	0/0:22,0:21:42.36:0,42,363	1/1:11,0:14:18.72:255,19,0	1/1:15,0:15:7.97:179,8,0	0/0:15,0:14:33.34:0,33,218	1/1:7,11:17:18.06:287,18,0	1/1:21,0:21:50.57:535,51,0	1/1:6,7:11:17.35:183,17,0	0/1:15,1:15:10.37:275,0,10	0/0:19,0:14:38.20:0,38,333	1/1:12,0:12:32.82:367,33,0	1/1:12,0:15:19.20:469,19,0	1/1:19,0:19:22.19:509,22,0	0/0:27,0:22:52.20:0,52,374	1/1:23,0:21:22.23:461,22,0	1/1:20,0:18:19.14:467,19,0	1/1:19,0:17:15.63:401,16,0	1/1:8,0:7:11.42:120,11,0	0/0:15,0:13:38.10:0,38,326	0/0:11,0:11:28.39:0,28,256	0/0:16,0:14:21.08:0,21,172	1/1:19,0:17:6.92:447,7,0	1/1:17,1:26:42.46:671,42,0	1/1:25,0:22:14.84:378,15,0	1/1:16,0:6:14.93:154,15,0
chr10	67257185	.	A	AC	375.62	PASS	AB=0.967;AC=20;AF=0.357;AN=56;BaseQRankSum=8.950;DP=529;FS=4.380;HRun=0;HaplotypeScore=91.6208;InbreedingCoeff=-0.1186;MQ=50.77;MQ0=49;MQRankSum=5.913;QD=1.24;ReadPosRankSum=4.447;VQSLOD=1.5218;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:30:85.42:0,85,626	0/0:8,0:7:17.13:0,17,109	0/0:31,0:3:8.65:0,9,57	0/0:31,0:11:7.21:0,7,54	0/0:21,0:20:50.48:0,50,345	0/1:14,1:14:7.48:31,0,7	0/1:14,1:15:7.09:7,0,12	0/0:16,0:15:36.20:0,36,242	1/1:19,0:17:3.18:9,3,0	0/1:20,1:21:26.56:56,0,27	0/1:13,0:11:0.85:1,0,9	0/1:16,0:15:7.24:7,0,80	0/0:19,0:14:38.32:0,38,298	0/1:12,0:12:3.16:21,0,3	0/1:16,0:15:24.27:35,0,24	0/1:19,0:19:21.81:22,0,64	0/0:26,0:22:50.89:0,51,345	0/1:22,1:21:24.18:66,0,24	0/1:19,1:18:37.37:37,0,73	1/1:17,2:17:0.05:69,0,0	0/1:7,1:7:12.82:32,0,13	0/0:15,0:13:38.35:0,38,300	0/0:11,0:11:29.45:0,29,253	0/0:16,0:14:23.94:0,24,169	0/1:18,1:17:10:34,0,10	0/1:27,0:26:43.56:60,0,44	0/1:24,1:22:21.50:22,0,58	1/1:16,0:6:1.61:22,2,0
chr10	67257186	.	A	AC	1727.70	PASS	AB=0.777;AC=23;AF=0.411;AN=56;BaseQRankSum=8.650;DP=530;FS=2.464;HRun=0;HaplotypeScore=88.0683;InbreedingCoeff=0.0826;MQ=53.16;MQ0=48;MQRankSum=0.807;QD=5.19;ReadPosRankSum=7.887;VQSLOD=2.9887;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:30:85.44:0,85,629	0/0:8,0:7:17.03:0,17,112	0/0:32,0:4:8.73:0,9,61	0/1:32,0:12:2.05:2,0,62	0/0:21,0:20:50.33:0,50,341	0/1:10,5:14:27.97:59,0,28	1/1:11,4:15:7.75:71,8,0	0/0:17,0:16:39.59:0,40,273	1/1:14,5:17:17.36:113,17,0	0/1:14,6:20:14.93:202,0,15	0/1:10,3:11:27.51:46,0,28	0/1:13,3:15:25.65:59,0,26	0/0:19,0:14:38.31:0,38,296	0/1:6,6:12:2.55:72,0,3	1/1:8,8:15:17.24:176,17,0	1/1:11,8:19:2.14:182,2,0	0/0:26,0:22:51.14:0,51,344	0/1:16,7:21:6.68:143,0,7	0/1:13,7:18:23.74:131,0,24	0/1:12,7:17:12.41:127,0,12	0/1:6,2:7:17.04:30,0,17	0/0:16,0:14:38.84:0,39,314	0/0:11,0:11:28.67:0,29,247	0/0:15,0:14:22.09:0,22,168	0/1:9,9:16:17.06:150,0,17	0/1:18,10:27:9.91:187,0,10	0/1:19,4:20:3.93:93,0,4	1/1:15,1:6:6.72:60,7,0
chr10	67257192	.	A	AAC	5168.93	PASS	AB=0.531;AC=33;AF=0.589;AN=56;BaseQRankSum=4.673;DP=532;FS=12.843;HRun=0;HaplotypeScore=83.8419;InbreedingCoeff=0.9305;MQ=56.74;MQ0=42;MQRankSum=2.486;QD=17.95;ReadPosRankSum=8.207;VQSLOD=2.9351;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:32:88.52:0,89,642	0/0:9,0:8:20.65:0,21,145	0/0:34,0:5:14.86:0,15,113	0/0:36,0:14:20:0,20,131	0/0:22,0:21:49.87:0,50,348	1/1:7,5:14:23.92:259,24,0	0/1:2,3:17:0.73:123,0,1	0/0:21,0:20:49.77:0,50,368	1/1:13,5:16:20.96:219,21,0	1/1:12,6:19:41.11:453,41,0	1/1:5,4:8:10.72:137,11,0	1/1:12,3:14:15.17:246,15,0	0/0:18,0:13:37.48:0,37,293	1/1:6,6:12:32.87:290,33,0	1/1:9,8:16:18.96:341,19,0	1/1:8,8:17:24.98:376,25,0	0/0:28,0:25:55.55:0,56,389	1/1:14,7:21:27.83:433,28,0	1/1:4,7:19:18.03:422,18,0	1/1:0,7:17:38.91:403,39,0	1/1:7,2:9:17.99:179,18,0	0/0:16,0:14:38.69:0,39,301	0/0:12,0:12:32.77:0,33,265	0/0:14,0:14:29.24:0,29,205	1/1:6,9:14:36.05:391,36,0	1/1:15,10:24:32.47:476,32,0	1/1:15,4:19:8.09:293,8,0	1/1:14,1:6:13.55:127,14,0
chr10	67257436	.	CTG	C	16954.01	PASS	AB=1.000;AC=37;AF=0.661;AN=56;BaseQRankSum=8.595;DP=597;FS=1.918;HRun=0;HaplotypeScore=111.9029;InbreedingCoeff=0.9314;MQ=76.40;MQ0=4;MQRankSum=-2.459;QD=40.37;ReadPosRankSum=1.173;VQSLOD=6.3181;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,120,2308	0/0:8,0:8:21.05:0,21,372	0/0:16,0:15:42.14:0,42,752	0/1:11,0:11:7.72:8,0,454	0/0:19,0:19:54.17:0,54,1008	1/1:0,26:25:72.24:1102,72,0	1/1:0,13:13:39.13:597,39,0	1/1:0,22:22:66.14:868,66,0	1/1:0,20:20:54.18:825,54,0	1/1:0,35:35:99:1584,105,0	1/1:0,23:23:69.19:1030,69,0	1/1:0,18:18:51.17:781,51,0	0/0:15,0:15:45.15:0,45,847	1/1:0,27:27:75.25:1148,75,0	1/1:0,25:25:63.21:965,63,0	1/1:1,19:20:51.17:781,51,0	0/0:29,0:29:81.23:0,81,1513	1/1:0,21:21:60.20:918,60,0	1/1:2,14:15:39.08:528,39,0	1/1:0,22:20:51.17:780,51,0	1/1:0,18:18:42.14:643,42,0	0/0:17,0:17:51.17:0,51,976	0/0:18,0:18:54.19:0,54,1022	0/0:15,0:15:45.13:0,45,830	1/1:0,19:19:54.18:827,54,0	1/1:0,34:34:99:1520,102,0	1/1:1,35:35:93.31:1405,93,0	1/1:0,14:14:42.14:643,42,0
chr10	67257795	.	A	ATCTA	2847.75	PASS	AB=1.000;AC=34;AF=0.773;AN=44;BaseQRankSum=2.437;DP=656;FS=1.756;HRun=0;HaplotypeScore=153.9213;InbreedingCoeff=0.6552;MQ=56.44;MQ0=8;MQRankSum=-3.334;QD=6.55;ReadPosRankSum=-1.299;VQSLOD=2.2038;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:21.76:0,22,323	0/0:14,0:14:24.02:0,24,365	./.	./.	0/1:20,0:19:0:0,0,0	1/1:26,0:21:6.02:121,6,0	1/1:15,0:14:3.01:64,3,0	1/1:39,0:39:21:290,21,0	1/1:22,0:21:9.91:125,10,0	1/1:23,0:22:12.03:170,12,0	./.	1/1:26,0:25:5.86:94,6,0	1/1:9,8:18:6.02:138,6,0	0/1:23,0:22:0:1,0,0	./.	1/1:22,0:18:6.91:115,7,0	0/0:24,0:24:32.35:0,32,500	1/1:13,0:12:3.01:52,3,0	1/1:22,0:21:14.22:179,14,0	1/1:35,0:32:6.02:96,6,0	./.	1/1:29,0:29:36.12:839,36,0	0/0:22,0:22:39.13:0,39,604	1/1:19,0:15:3.01:63,3,0	1/1:22,0:20:9.01:174,9,0	1/1:41,0:38:23.93:296,24,0	1/1:20,0:19:12:177,12,0	./.
chr10	67257849	.	T	TC	111.63	PASS	AB=0.907;AC=9;AF=0.161;AN=56;BaseQRankSum=7.857;DP=560;FS=0.796;HRun=0;HaplotypeScore=124.5663;InbreedingCoeff=-0.2098;MQ=37.48;MQ0=37;MQRankSum=-4.900;QD=0.56;ReadPosRankSum=-2.946;VQSLOD=1.8389;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:26:19.97:0,20,253	0/0:12,0:12:17.51:0,18,203	0/1:13,0:2:12.09:12,0,35	0/0:19,0:2:5.98:0,6,61	0/0:25,0:24:2.99:0,3,24	0/1:24,5:22:1.78:2,0,70	0/0:28,0:28:25.70:0,26,295	0/0:16,0:15:42.14:0,42,579	0/1:20,0:19:46.89:52,0,47	0/1:17,2:14:25.55:26,0,393	0/0:8,1:8:6.02:0,6,84	0/0:22,1:22:30.04:0,30,346	0/0:21,0:21:35.29:0,35,482	0/0:17,0:17:11.67:0,12,126	0/1:29,1:27:0.22:0,0,104	0/1:16,2:14:30.67:37,0,31	0/0:27,0:28:48.77:0,49,460	0/0:9,0:8:14.98:0,15,185	0/1:19,2:18:39.68:40,0,512	0/0:20,3:18:7.67:0,8,143	0/0:16,0:13:3.01:0,3,42	0/0:27,0:26:45.15:0,45,625	0/0:19,0:19:36.10:0,36,479	0/0:27,0:23:29.01:0,29,350	0/0:13,0:10:13.55:0,14,106	0/1:29,3:27:19.46:19,0,835	0/1:10,7:16:50.46:50,0,198	0/0:2,0:1:3:0,3,25
chr10	67258540	.	C	CTT	17919.09	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-12.060;DP=579;FS=0.000;HRun=8;HaplotypeScore=59.4197;InbreedingCoeff=0.9950;MQ=70.26;MQ0=2;MQRankSum=-2.834;QD=37.72;ReadPosRankSum=-0.699;VQSLOD=4.2699;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,25:29:69.24:1089,69,0	1/1:1,13:14:39.13:607,39,0	0/0:14,0:14:32.93:0,33,360	0/0:16,0:16:23.67:0,24,253	1/1:6,28:33:81.23:1233,81,0	1/1:3,23:26:69.24:1095,69,0	1/1:1,9:10:27.09:429,27,0	1/1:9,30:42:98.28:1429,98,0	1/1:3,11:14:27.09:429,27,0	1/1:3,15:18:45.13:669,45,0	1/1:2,17:19:54.18:853,54,0	1/1:3,16:19:45.15:714,45,0	0/0:15,0:15:42.11:0,42,468	1/1:1,13:14:36.12:572,36,0	1/1:3,25:28:60.20:953,60,0	1/1:2,21:23:54.18:857,54,0	1/1:3,23:25:69.23:1084,69,0	1/1:1,14:15:42.14:667,42,0	1/1:3,19:22:57.19:901,57,0	1/1:2,17:20:42.10:630,42,0	1/1:0,9:9:21.07:333,21,0	0/0:19,0:19:57.15:0,57,635	0/0:23,0:23:69.17:0,69,759	0/0:17,0:17:48.13:0,48,535	1/1:6,15:21:38.62:580,39,0	1/1:4,26:31:81.25:1235,81,0	1/1:6,28:34:84.29:1322,84,0	1/1:1,5:6:15.05:238,15,0
chr10	67259012	.	GGATCT	G	12030.18	PASS	AC=36;AF=0.667;AN=54;BaseQRankSum=14.188;DP=417;FS=19.978;HRun=0;HaplotypeScore=93.7696;InbreedingCoeff=0.9504;MQ=44.45;MQ0=14;MQRankSum=-12.714;QD=47.55;ReadPosRankSum=-1.067;VQSLOD=3.2749;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,111,3439	0/0:3,0:3:9.03:0,9,282	./.	0/0:11,0:2:5.99:0,6,105	0/0:23,0:23:66.23:0,66,1994	1/1:4,13:16:33.11:703,33,0	1/1:1,10:10:27.09:568,27,0	1/1:3,23:17:48.14:881,48,0	1/1:2,11:13:24.08:505,24,0	1/1:0,11:11:33.11:693,33,0	1/1:1,19:20:57.20:1199,57,0	1/1:1,13:14:36.12:767,36,0	0/0:15,0:15:45.15:0,45,1394	1/1:1,12:13:36.12:762,36,0	1/1:0,13:13:33.11:694,33,0	1/1:1,14:15:39.13:831,39,0	0/0:33,0:33:93.30:0,93,2839	1/1:3,6:9:12.04:256,12,0	1/1:5,10:15:30.10:600,30,0	1/1:0,10:10:24:423,24,0	1/1:1,14:14:33.11:690,33,0	0/0:7,0:7:21.07:0,21,658	0/0:11,0:11:33.11:0,33,1025	0/0:13,0:13:36.12:0,36,1119	1/1:4,15:19:39.13:797,39,0	1/1:1,11:12:33.11:703,33,0	1/1:2,16:18:39.13:831,39,0	1/1:0,2:2:6.02:128,6,0
chr10	67259193	.	GCACACACACACA	G	3089.03	PASS	AB=0.636;AC=7;AF=0.125;AN=56;BaseQRankSum=2.747;DP=435;FS=14.809;HRun=0;HaplotypeScore=168.7448;InbreedingCoeff=0.6099;MQ=52.26;MQ0=14;MQRankSum=-3.806;QD=31.20;ReadPosRankSum=5.399;VQSLOD=1.8699;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:12,16:27:41.30:829,0,41	1/1:4,2:6:3.01:107,3,0	0/0:28,0:12:20.86:0,21,574	0/0:26,0:15:20.64:0,21,522	1/1:11,26:37:36.12:1281,36,0	0/0:10,0:10:12.04:0,12,532	0/0:27,0:27:33.10:0,33,1214	0/0:26,0:24:54.16:0,54,2073	0/0:12,0:12:9.03:0,9,283	0/0:23,0:23:51.16:0,51,1667	0/0:15,0:14:18.06:0,18,600	0/0:10,0:10:9.03:0,9,479	0/0:8,0:9:21.07:0,21,1071	0/0:8,0:8:12.04:0,12,579	0/0:6,0:6:6.02:0,6,248	0/0:7,0:7:6.02:0,6,238	1/1:12,13:28:32.70:1010,33,0	0/0:10,1:11:21.07:0,21,878	0/0:15,0:13:33.10:0,33,1243	0/0:12,0:12:15.05:0,15,737	0/0:10,0:10:2.71:0,3,161	0/0:8,0:8:21.07:0,21,938	0/0:16,0:19:45.14:0,45,2434	0/0:18,0:20:57.20:0,57,2629	0/0:10,0:9:18.05:0,18,692	0/0:11,0:11:19.62:0,20,693	0/0:7,0:7:9.03:0,9,403	0/0:6,0:6:15.05:0,15,658
chr10	67259205	.	A	ACACACACACACACGCACG	16270.04	PASS	AB=0.989;AC=37;AF=0.661;AN=56;BaseQRankSum=-6.461;DP=520;FS=0.000;HRun=0;HaplotypeScore=217.8144;InbreedingCoeff=0.6336;MQ=51.00;MQ0=15;MQRankSum=-3.399;QD=45.19;ReadPosRankSum=-0.096;VQSLOD=3.6402;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:23:30.10:0,30,1253	0/0:5,0:5:6.49:0,6,170	0/0:35,0:11:1.73:0,2,67	0/1:29,0:13:22.38:23,0,22	0/0:33,0:33:39.08:0,39,1273	1/1:7,8:17:21.07:1661,21,0	1/1:26,0:26:32.69:879,33,0	0/1:36,0:34:99:562,0,207	1/1:11,1:12:15.05:863,15,0	1/1:22,0:22:51.10:1555,51,0	1/1:9,9:24:5.75:451,6,0	1/1:6,3:12:11.77:1011,12,0	0/0:10,0:10:27.08:0,27,841	1/1:3,8:13:9.02:767,9,0	1/1:5,4:11:6.02:451,6,0	1/1:9,0:9:11.94:288,12,0	0/1:19,0:19:52.93:53,0,1108	1/1:8,9:18:17.71:1020,18,0	1/1:18,0:16:36.03:1090,36,0	1/1:6,8:19:13.81:964,14,0	1/1:13,0:13:7.47:71,7,0	0/0:9,0:9:15.04:0,15,423	0/0:21,0:21:48.15:0,48,1692	0/0:23,0:23:45.13:0,45,1455	1/1:5,5:19:15.05:995,15,0	1/1:7,8:20:36.12:1785,36,0	1/1:3,5:13:12.04:1011,12,0	1/1:3,3:7:12.04:768,12,0
chr10	67261914	.	AT	A	394.90	PASS	AB=0.938;AC=4;AF=0.071;AN=56;BaseQRankSum=5.624;DP=531;FS=0.757;HRun=10;HaplotypeScore=57.0967;InbreedingCoeff=0.4708;MQ=69.45;MQ0=3;MQRankSum=-0.385;QD=4.94;ReadPosRankSum=-3.506;VQSLOD=-0.0019;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:29,3:32:9.30:9,0,594	0/0:9,0:9:21.06:0,21,232	0/1:24,1:20:1.58:2,0,208	0/0:24,0:23:57.05:0,57,584	0/0:13,0:13:39.11:0,39,431	0/0:22,0:22:57.13:0,57,615	0/0:16,0:16:45.11:0,45,488	1/1:4,19:23:56.95:487,57,0	0/0:23,2:25:37.11:0,37,637	0/0:18,0:18:51.14:0,51,564	0/0:11,0:11:1.72:0,2,240	0/0:23,0:23:60.11:0,60,622	0/0:12,0:12:30.07:0,30,325	0/0:15,0:15:39.11:0,39,431	0/0:20,1:21:31.09:0,31,564	0/0:20,1:21:31.10:0,31,571	0/0:28,0:28:60.16:0,60,664	0/0:35,0:35:84.23:0,84,928	0/0:19,0:17:36.06:0,36,374	0/0:22,0:22:53.95:0,54,559	0/0:10,0:10:24.06:0,24,266	0/0:6,0:6:15.03:0,15,158	0/0:13,0:13:33.09:0,33,365	0/0:25,0:25:63.16:0,63,688	0/0:19,0:19:39.10:0,39,425	0/0:20,0:20:54.15:0,54,597	0/0:15,0:15:39.11:0,39,432	0/0:9,0:9:23.91:0,24,265
chr10	67262161	.	CGTGTGTGTGTGTGT	C	984.09	PASS	AC=14;AF=0.438;AN=32;BaseQRankSum=3.830;DP=483;FS=7.496;HRun=0;HaplotypeScore=159.7388;InbreedingCoeff=0.5454;MQ=71.94;MQ0=21;MQRankSum=-3.541;QD=9.46;ReadPosRankSum=0.129;VQSLOD=1.9451;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:36:9.03:0,9,232	./.	./.	./.	0/0:11,0:11:3.01:0,3,83	0/0:16,0:16:0.47:0,0,1	./.	0/0:31,0:30:1.72:0,2,4	1/1:12,1:14:6.02:214,6,0	./.	1/1:8,0:8:0.47:1,0,0	1/1:11,3:13:9.03:347,9,0	0/0:14,0:14:9.03:0,9,443	./.	./.	1/1:12,1:15:9.03:311,9,0	0/0:26,0:26:18.53:0,19,617	1/1:16,0:16:3.01:88,3,0	1/1:21,0:16:2.97:20,3,0	./.	0/0:34,0:31:0.47:0,0,1	./.	./.	0/0:23,0:22:30.10:0,30,1205	./.	0/0:17,0:17:0.47:0,0,1	1/1:15,1:14:3.01:116,3,0	./.
chr10	67262410	.	C	CTT	2563.36	PASS	AB=1.000;AC=35;AF=0.648;AN=54;BaseQRankSum=4.179;DP=204;FS=0.672;HRun=0;HaplotypeScore=45.6524;InbreedingCoeff=0.7754;MQ=45.57;MQ0=7;MQRankSum=-2.834;QD=19.13;ReadPosRankSum=-2.038;VQSLOD=3.1367;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:13:30.09:0,30,464	./.	0/0:10,0:1:2.96:0,3,19	0/0:16,0:8:17.73:0,18,238	0/0:8,0:8:21.04:0,21,291	1/1:9,0:9:17.71:145,18,0	1/1:4,0:4:11.82:76,12,0	1/1:1,9:11:22.10:239,22,0	1/1:7,0:7:15.81:140,16,0	1/1:2,11:12:28.69:288,29,0	1/1:0,4:4:2.94:18,3,0	1/1:5,0:5:14.88:117,15,0	0/0:2,0:2:6.02:0,6,98	1/1:8,0:8:17.46:106,17,0	1/1:5,0:5:14.85:103,15,0	1/1:6,0:6:11.81:77,12,0	0/0:4,0:4:12.01:0,12,168	1/1:8,0:7:14.01:201,14,0	1/1:2,0:2:5.99:79,6,0	1/1:1,6:6:3.43:20,3,0	0/1:8,0:8:0.89:67,0,1	0/0:9,0:9:24.08:0,24,391	0/0:2,0:2:6.02:0,6,98	0/0:4,0:4:6.02:0,6,98	1/1:12,0:12:35.62:277,36,0	1/1:0,10:10:27.04:351,27,0	1/1:10,0:10:26.90:313,27,0	1/1:5,0:5:14.66:138,15,0
chr10	67262524	.	CTA	C	1864.79	PASS	AB=0.992;AC=47;AF=0.870;AN=54;BaseQRankSum=-6.763;DP=263;FS=0.000;HRun=0;HaplotypeScore=44.2341;InbreedingCoeff=0.2100;MQ=47.73;MQ0=15;MQRankSum=2.642;QD=8.88;ReadPosRankSum=0.913;VQSLOD=2.9636;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,0:9:11.97:97,12,0	./.	0/1:38,0:9:2.43:2,0,16	0/0:52,0:9:12.57:0,13,91	1/1:7,1:8:8.75:67,9,0	1/1:7,0:5:3.94:27,4,0	1/1:11,0:11:6.22:63,6,0	1/1:21,0:21:41.29:276,41,0	1/1:5,0:5:7.84:68,8,0	1/1:13,0:13:28.30:245,28,0	1/1:5,0:5:8.49:59,8,0	1/1:6,0:5:2.49:24,2,0	1/1:3,0:2:5.92:42,6,0	1/1:9,0:8:11.08:112,11,0	0/1:7,0:7:12.02:59,0,12	1/1:7,0:7:3.66:39,4,0	1/1:3,0:3:5.83:33,6,0	0/1:6,0:5:6.94:56,0,7	1/1:6,0:5:12.85:99,13,0	1/1:7,0:6:6.80:66,7,0	1/1:6,0:6:11.99:100,12,0	1/1:3,0:3:8.92:67,9,0	1/1:0,5:5:3.01:46,3,0	0/0:1,0:1:0:0,0,0	1/1:9,1:10:13.87:135,14,0	1/1:4,0:4:6.47:55,6,0	1/1:8,0:8:16.98:123,17,0	1/1:2,0:2:2.94:25,3,0
chr10	67263885	.	A	ACCC	5529.75	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-7.097;DP=524;FS=26.308;HRun=7;HaplotypeScore=75.6664;InbreedingCoeff=0.8657;MQ=83.83;MQ0=0;MQRankSum=-0.880;QD=18.49;ReadPosRankSum=-3.595;VQSLOD=0.3094;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:87.18:0,87,1118	0/0:11,0:11:27.04:0,27,330	0/0:21,0:21:18.29:0,18,420	0/0:23,0:23:33.78:0,34,465	0/0:28,0:28:72.19:0,72,960	1/1:2,11:15:12:171,12,0	1/1:5,28:37:50.97:951,51,0	1/1:9,8:18:17.99:197,18,0	1/1:7,10:20:6.02:125,6,0	1/1:8,11:22:31.62:523,32,0	1/1:3,6:12:11.27:200,11,0	1/1:4,15:20:3.01:62,3,0	0/0:23,0:23:66.20:0,66,883	1/1:4,11:17:15.05:309,15,0	1/1:5,9:14:21.07:435,21,0	1/1:2,11:13:20.86:435,21,0	0/0:32,0:32:87.28:0,87,1184	1/1:2,12:14:9.03:187,9,0	1/1:5,6:13:24.02:376,24,0	1/1:5,6:12:6.02:102,6,0	1/1:5,14:21:9.03:187,9,0	0/0:21,0:21:60.18:0,60,785	0/0:13,0:13:6.47:0,6,349	0/0:22,0:22:60.19:0,60,813	1/1:5,12:20:15.05:308,15,0	1/1:6,3:9:12.04:244,12,0	1/1:16,4:20:39.07:656,39,0	1/1:0,2:2:3.01:62,3,0
chr10	67265749	.	G	GT	8302.91	PASS	AB=0.808;AC=36;AF=0.643;AN=56;BaseQRankSum=-4.224;DP=456;FS=0.000;HRun=8;HaplotypeScore=55.7719;InbreedingCoeff=0.8249;MQ=72.27;MQ0=0;MQRankSum=-6.039;QD=28.05;ReadPosRankSum=1.468;VQSLOD=5.1779;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,2:32:58.46:0,58,789	0/0:7,0:7:20.99:0,21,186	0/1:14,0:13:6.91:7,0,52	0/0:8,0:8:11.99:0,12,106	0/0:19,0:19:50.96:0,51,448	1/1:1,16:17:48.08:537,48,0	1/1:6,21:27:38.76:689,39,0	1/1:3,13:16:14.68:421,15,0	1/1:2,11:13:33.10:381,33,0	1/1:1,22:23:66.18:750,66,0	1/1:0,15:15:45.09:505,45,0	1/1:1,10:11:33.10:381,33,0	0/0:19,0:19:54.02:0,54,494	1/1:2,7:8:24:260,24,0	1/1:1,15:16:45.13:519,45,0	1/1:1,10:11:30.09:346,30,0	0/0:31,0:31:90.05:0,90,823	1/1:3,18:21:57.16:649,57,0	1/1:1,18:19:51.15:586,51,0	1/1:5,13:18:45.08:494,45,0	0/1:3,4:8:31.02:164,0,31	0/0:8,0:8:24:0,24,216	0/0:17,0:17:42.01:0,42,380	0/0:19,0:19:56.95:0,57,506	1/1:2,15:17:42.11:474,42,0	1/1:5,15:20:45.09:494,45,0	1/1:2,16:18:54.14:612,54,0	1/1:2,1:3:3.01:35,3,0
chr10	67265806	.	G	GTT	12522.84	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=9.746;DP=493;FS=3.433;HRun=2;HaplotypeScore=123.9747;InbreedingCoeff=0.9817;MQ=86.10;MQ0=0;MQRankSum=-14.151;QD=49.30;ReadPosRankSum=-0.963;VQSLOD=4.2831;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:90.30:0,90,1323	0/0:7,0:7:21.07:0,21,309	0/0:24,0:24:40.21:0,40,836	0/0:21,0:19:42.01:0,42,577	0/0:28,0:28:78.23:0,78,1104	1/1:0,14:14:42.06:713,42,0	1/1:4,13:17:45.11:794,45,0	0/0:36,0:36:99:0,105,1527	1/1:3,9:12:36.04:598,36,0	1/1:3,13:16:42.14:776,42,0	1/1:3,15:18:51.08:847,51,0	1/1:0,13:13:39.13:723,39,0	0/0:20,0:20:54.17:0,54,775	1/1:3,11:13:39.05:643,39,0	1/1:6,12:18:45.11:763,45,0	1/1:1,15:16:45.15:837,45,0	0/0:33,0:33:96.32:0,96,1411	1/1:2,8:10:30.07:503,30,0	1/1:3,10:12:36.12:673,36,0	1/1:3,12:15:42.14:786,42,0	1/1:0,10:10:30.10:553,30,0	0/0:8,0:8:24.08:0,24,352	0/0:23,0:23:69.23:0,69,1015	0/0:6,0:6:15.05:0,15,220	1/1:2,21:23:63.10:1068,63,0	1/1:1,15:16:48.12:848,48,0	1/1:5,22:27:75.15:1287,75,0	1/1:0,2:2:6.02:112,6,0
chr10	67265846	.	TGGGG	T	10843.39	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=14.466;DP=620;FS=11.249;HRun=4;HaplotypeScore=195.3822;InbreedingCoeff=0.9873;MQ=74.18;MQ0=30;MQRankSum=-15.234;QD=38.05;ReadPosRankSum=4.556;VQSLOD=1.3826;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:32:78.37:0,78,2327	0/0:11,0:10:30.10:0,30,720	0/0:88,0:39:95.14:0,95,1694	0/0:69,0:27:54.39:0,54,986	0/0:39,0:37:99:0,102,2478	1/1:11,0:10:30.08:394,30,0	1/1:11,0:11:30.10:439,30,0	1/1:29,0:25:75.13:961,75,0	1/1:14,0:14:42.14:595,42,0	1/1:23,0:20:57.14:784,57,0	1/1:16,1:17:48.16:670,48,0	1/1:14,0:14:42.14:592,42,0	0/0:16,0:16:48.16:0,48,1224	1/1:12,0:13:36.12:499,36,0	1/1:22,0:21:60.20:871,60,0	1/1:15,1:16:48.16:694,48,0	0/0:34,0:34:98.98:0,99,2435	1/1:7,1:7:21:254,21,0	1/1:15,0:10:27.09:405,27,0	1/1:13,1:15:45.15:637,45,0	1/1:6,0:5:15.04:195,15,0	0/0:12,0:11:29.40:0,29,743	0/0:22,0:22:66.21:0,66,1566	0/0:8,0:8:21.06:0,21,487	1/1:20,0:20:59.93:790,60,0	1/1:19,0:19:54.17:754,54,0	1/1:27,0:27:81.27:1173,81,0	1/1:4,0:4:9.03:135,9,0
chr10	67265847	.	GGGGT	G	9191.61	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=15.496;DP=625;FS=10.423;HRun=0;HaplotypeScore=201.8819;InbreedingCoeff=0.9827;MQ=73.09;MQ0=30;MQRankSum=-15.786;QD=32.03;ReadPosRankSum=5.298;VQSLOD=3.9112;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:33:90.21:0,90,2552	0/0:11,0:10:30.08:0,30,748	0/0:91,0:38:94.68:0,95,1673	0/0:72,0:27:53.22:0,53,936	0/0:40,0:38:99:0,102,2607	1/1:11,0:10:27.53:313,28,0	1/1:10,1:11:30.09:376,30,0	1/1:27,2:25:68.79:702,69,0	1/1:13,1:14:42.08:511,42,0	1/1:20,3:20:56.92:699,57,0	1/1:14,3:17:48.11:620,48,0	1/1:13,1:14:42.13:519,42,0	0/0:16,0:16:48.16:0,48,1291	1/1:13,1:13:36.11:433,36,0	1/1:23,0:22:60.18:724,60,0	1/1:15,1:16:48.12:605,48,0	0/0:33,0:33:96.11:0,96,2671	1/1:8,0:7:16.60:203,17,0	1/1:18,0:12:13.16:325,13,0	1/1:15,0:15:45.11:544,45,0	1/1:6,0:5:14.83:150,15,0	0/0:12,0:11:29.83:0,30,812	0/0:21,0:21:63.22:0,63,1654	0/0:8,0:8:21.07:0,21,572	1/1:20,0:20:55.72:700,56,0	1/1:17,0:17:51.14:602,51,0	1/1:25,2:27:81.25:1048,81,0	1/1:4,0:4:9.03:117,9,0
chr10	67265849	.	GGT	G	10561.31	PASS	AB=0.581;AC=35;AF=0.625;AN=56;BaseQRankSum=15.634;DP=630;FS=9.609;HRun=0;HaplotypeScore=177.0111;InbreedingCoeff=0.9005;MQ=70.71;MQ0=31;MQRankSum=-16.027;QD=37.85;ReadPosRankSum=5.400;VQSLOD=5.3041;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:38:97.03:0,97,1697	0/0:10,0:9:27.06:0,27,440	0/0:94,0:38:52.41:0,52,712	0/0:71,0:26:9.71:0,10,340	0/0:42,0:40:99:0,99,1360	1/1:3,8:10:29.83:425,30,0	1/1:4,8:12:15.36:421,15,0	1/1:11,11:18:50.05:578,50,0	1/1:1,12:13:39.09:587,39,0	1/1:6,16:19:54.02:723,54,0	1/1:5,12:17:47.98:630,48,0	1/1:1,13:14:41.97:625,42,0	0/0:16,0:16:48.07:0,48,798	1/1:3,11:13:36.12:557,36,0	1/1:2,21:22:60.18:923,60,0	1/1:2,14:16:48.03:670,48,0	0/0:35,0:35:99:0,102,1779	1/1:5,3:7:13.76:190,14,0	0/1:5,13:12:22.04:386,0,22	1/1:2,13:15:45.14:649,45,0	1/1:3,3:5:14.98:197,15,0	0/0:13,0:12:32.86:0,33,517	0/0:22,0:22:63.57:0,64,991	0/0:9,0:9:23.93:0,24,402	1/1:0,20:20:60.11:864,60,0	1/1:0,17:17:51.17:779,51,0	1/1:2,25:27:81.21:1215,81,0	1/1:0,4:4:9.03:143,9,0
chr10	67265852	.	T	TG	1103.13	PASS	AB=0.979;AC=25;AF=0.446;AN=56;BaseQRankSum=14.540;DP=679;FS=23.238;HRun=0;HaplotypeScore=213.3907;InbreedingCoeff=0.1359;MQ=70.07;MQ0=33;MQRankSum=-14.291;QD=3.56;ReadPosRankSum=5.708;VQSLOD=1.2279;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:39:99:0,113,1376	0/0:10,0:9:27.05:0,27,341	0/0:106,1:41:52.47:0,52,605	0/0:74,0:26:34.61:0,35,361	0/0:43,0:41:99:0,107,1322	1/1:13,1:13:9.41:91,9,0	0/1:13,1:14:11.26:62,0,11	0/1:25,2:22:10.58:165,0,11	1/1:14,0:14:3.40:43,3,0	0/1:25,0:22:12.09:120,0,12	0/1:18,0:18:42.32:101,0,42	1/1:16,0:16:6.95:51,7,0	0/0:14,0:14:42.13:0,42,566	0/1:15,0:14:17.71:18,0,30	0/1:24,0:23:16.41:16,0,24	1/1:16,0:16:2.22:94,2,0	0/0:35,0:35:99:0,99,1316	0/1:9,1:9:24.42:34,0,24	0/1:20,0:14:16.87:17,0,69	0/1:19,0:19:41.54:51,0,42	1/1:5,2:5:14.82:103,15,0	0/0:14,0:13:33.57:0,34,428	0/0:22,0:22:62.91:0,63,790	0/0:10,0:10:21.07:0,21,293	0/1:20,0:20:8.51:79,0,9	1/1:17,0:17:20.90:137,21,0	0/1:30,0:30:36.47:91,0,36	1/1:4,0:4:4.84:13,5,0
chr10	67265855	.	T	TG	4316.95	PASS	AB=1.000;AC=36;AF=0.643;AN=56;BaseQRankSum=15.647;DP=697;FS=10.408;HRun=0;HaplotypeScore=205.1328;InbreedingCoeff=0.8301;MQ=66.55;MQ0=35;MQRankSum=-14.733;QD=10.71;ReadPosRankSum=3.339;VQSLOD=4.2010;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:39:99:0,110,1343	0/0:8,0:7:21.07:0,21,293	0/0:107,0:37:28.93:0,29,442	0/1:75,0:26:13.94:14,0,200	0/0:43,0:41:99:0,111,1371	1/1:13,1:13:37.99:224,38,0	1/1:13,1:14:16.83:161,17,0	1/1:28,2:25:53.50:367,53,0	1/1:14,0:14:40.31:217,40,0	1/1:25,0:22:56.31:355,56,0	1/1:18,0:18:45.59:216,46,0	1/1:16,0:16:45.81:253,46,0	0/0:14,0:14:42.13:0,42,567	1/1:18,0:17:39.41:210,39,0	1/1:24,0:23:48.85:315,49,0	1/1:16,0:16:45.80:252,46,0	0/0:37,0:37:99:0,102,1352	1/1:11,1:11:23.66:145,24,0	0/1:23,0:17:27.05:168,0,27	1/1:18,0:19:42.87:255,43,0	1/1:6,2:6:10.78:72,11,0	0/0:15,0:14:36.24:0,36,442	0/0:19,0:19:57.17:0,57,751	0/0:11,0:11:21.07:0,21,293	1/1:21,0:21:37.83:248,38,0	1/1:18,0:18:48.29:276,48,0	1/1:34,0:34:88.87:518,89,0	1/1:4,0:4:8.77:51,9,0
chr10	67265861	.	T	TTG	1553.19	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=6.103;DP=705;FS=0.372;HRun=0;HaplotypeScore=216.4983;InbreedingCoeff=-0.2084;MQ=57.56;MQ0=38;MQRankSum=-6.199;QD=4.87;ReadPosRankSum=-5.735;VQSLOD=1.5607;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:35:99:0,102,1251	0/0:9,0:8:23.40:0,23,266	0/0:104,0:24:8.46:0,8,217	0/0:72,0:22:7.14:0,7,156	0/0:44,0:42:81.68:0,82,775	0/1:14,0:13:35.85:47,0,36	0/1:16,0:16:9.21:97,0,9	1/1:16,14:25:58.92:659,59,0	0/1:15,0:15:43.12:43,0,51	0/1:28,0:25:31.11:159,0,31	0/1:18,0:18:13.36:79,0,13	0/1:18,0:18:41.24:41,0,52	0/0:13,0:13:39.05:0,39,460	0/1:19,0:18:37.06:37,0,83	0/0:26,0:25:2.24:0,2,82	0/1:16,0:16:12.57:94,0,13	0/0:36,0:36:99:0,105,1239	0/1:13,0:12:27.38:47,0,27	0/1:24,0:18:50.59:51,0,53	0/1:21,0:21:42.26:90,0,42	1/1:8,0:6:3.46:52,3,0	0/0:16,0:15:33.28:0,33,472	0/0:19,0:19:52.93:0,53,626	0/0:11,0:11:21.07:0,21,310	0/1:20,0:20:47.35:83,0,47	0/1:19,0:19:43.64:61,0,44	0/1:36,0:36:69.79:70,0,97	0/1:4,0:4:4.43:7,0,4
chr10	67265862	.	T	TG	1062.87	PASS	AB=0.947;AC=24;AF=0.429;AN=56;BaseQRankSum=5.260;DP=690;FS=17.161;HRun=0;HaplotypeScore=196.6096;InbreedingCoeff=-0.0678;MQ=56.44;MQ0=38;MQRankSum=-3.873;QD=2.62;ReadPosRankSum=-6.885;VQSLOD=-0.0563;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:34:98.49:0,98,1126	0/0:9,0:8:24.01:0,24,263	0/0:103,0:23:12.12:0,12,267	0/1:71,0:21:6.07:6,0,147	0/0:43,0:41:94.49:0,94,832	0/1:11,3:13:14.21:92,0,14	1/1:14,2:16:1.66:71,2,0	1/1:27,2:24:44.46:281,44,0	0/1:14,0:14:18.69:19,0,19	1/1:28,0:25:0.29:136,0,0	0/1:14,1:15:15.53:59,0,16	0/1:15,1:16:15.16:15,0,19	0/0:13,0:13:38.72:0,39,415	0/1:17,1:17:29.83:30,0,55	0/1:25,1:25:22.25:22,0,25	1/1:14,1:15:2.99:87,3,0	0/0:36,0:36:99:0,105,1159	0/1:12,1:12:9.80:71,0,10	0/1:23,0:17:32.89:42,0,33	0/1:20,1:21:22.95:49,0,23	1/1:8,0:6:6.96:43,7,0	0/0:16,0:15:40.76:0,41,461	0/0:19,0:19:55.91:0,56,608	0/0:10,0:10:21.07:0,21,288	0/1:19,0:19:16.70:61,0,17	0/1:18,0:18:23.07:31,0,23	0/1:36,1:37:37.05:87,0,37	0/1:3,1:4:0.07:29,0,0
chr10	67266531	.	GGTT	G	2764.48	PASS	AB=1.000;AC=33;AF=0.589;AN=56;BaseQRankSum=9.877;DP=477;FS=0.000;HRun=0;HaplotypeScore=92.6805;InbreedingCoeff=0.8644;MQ=79.91;MQ0=1;MQRankSum=-3.341;QD=10.76;ReadPosRankSum=2.179;VQSLOD=2.8420;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:93.24:0,93,1660	0/0:11,0:11:30.06:0,30,474	0/0:17,0:14:20.16:0,20,299	0/0:18,0:16:0.05:0,0,177	0/0:24,0:24:63.08:0,63,888	1/1:14,0:14:19.72:129,20,0	1/1:11,0:11:15.61:88,16,0	0/0:22,0:22:51.35:0,51,424	1/1:9,0:9:8.81:53,9,0	1/1:13,1:14:32.41:243,32,0	1/1:16,0:16:27.11:226,27,0	1/1:17,0:17:29.27:171,29,0	0/0:16,0:16:42.07:0,42,662	1/1:11,0:11:6.49:105,6,0	0/1:14,0:14:10.24:12,0,10	1/1:12,0:12:17.65:106,18,0	0/0:32,0:32:87.15:0,87,1383	1/1:16,3:19:35.46:305,35,0	1/1:30,0:30:19.13:389,19,0	1/1:20,0:20:44.22:279,44,0	1/1:11,0:11:13.14:94,13,0	0/0:11,0:11:32.64:0,33,497	0/0:15,0:15:42.08:0,42,658	0/0:18,0:18:48.06:0,48,730	1/1:17,1:18:27.02:196,27,0	1/1:6,2:8:15.04:112,15,0	1/1:23,2:25:41.19:306,41,0	1/1:6,2:8:17.75:168,18,0
chr10	67266533	.	TTG	T	6157.51	PASS	AB=1.000;AC=35;AF=0.625;AN=56;BaseQRankSum=4.957;DP=471;FS=1.707;HRun=0;HaplotypeScore=70.8751;InbreedingCoeff=0.8923;MQ=80.23;MQ0=1;MQRankSum=-2.332;QD=22.98;ReadPosRankSum=2.590;VQSLOD=5.2704;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:92.30:0,92,1292	0/0:11,0:11:29.94:0,30,367	0/0:20,0:15:26.10:0,26,286	0/1:17,0:16:24.39:24,0,113	0/0:25,0:25:67.83:0,68,680	1/1:1,12:13:23.87:328,24,0	1/1:3,8:11:23.77:276,24,0	0/0:19,0:19:39.56:0,40,291	1/1:4,3:7:11.91:151,12,0	1/1:4,9:13:38.79:414,39,0	1/1:3,12:15:29.81:311,30,0	1/1:2,14:16:32.98:464,33,0	0/0:16,0:16:41.41:0,41,503	1/1:1,10:11:21.54:315,22,0	1/1:2,10:12:3.44:46,3,0	1/1:1,11:12:20.94:288,21,0	0/0:32,0:32:93.04:0,93,1176	1/1:4,15:19:35.25:492,35,0	1/1:7,22:29:65.35:783,65,0	1/1:3,17:20:51.69:528,52,0	1/1:8,3:11:28.66:249,29,0	0/0:11,0:11:20.99:0,21,343	0/0:15,0:15:41.34:0,41,505	0/0:18,0:18:47.84:0,48,575	1/1:2,17:19:29.96:407,30,0	1/1:2,6:8:20.96:217,21,0	1/1:3,23:26:45.01:613,45,0	1/1:3,5:8:20.92:253,21,0
chr10	67266534	.	TG	T	4747.74	PASS	AB=0.950;AC=35;AF=0.625;AN=56;BaseQRankSum=8.555;DP=482;FS=5.399;HRun=1;HaplotypeScore=72.7620;InbreedingCoeff=0.8758;MQ=79.77;MQ0=1;MQRankSum=-2.661;QD=17.26;ReadPosRankSum=1.940;VQSLOD=5.1831;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,1:37:89.75:0,90,968	0/0:11,0:11:27.60:0,28,267	0/0:18,1:14:23.50:0,24,233	0/1:18,1:17:15.18:15,0,124	0/0:26,0:26:48.53:0,49,415	1/1:13,1:14:24.01:223,24,0	1/1:9,2:11:23.98:232,24,0	0/0:19,1:20:2.38:0,2,145	1/1:3,3:6:12.01:120,12,0	1/1:10,3:13:38.58:346,39,0	1/1:14,1:15:29.86:249,30,0	1/1:15,1:16:32.99:298,33,0	0/0:17,0:17:31.48:0,31,365	1/1:10,1:11:23.96:203,24,0	1/1:11,0:11:6.46:51,6,0	1/1:11,1:12:21.01:199,21,0	0/0:31,1:32:90.76:0,91,890	1/1:20,0:20:38.91:322,39,0	1/1:26,3:29:85.03:696,85,0	1/1:17,3:20:46.80:449,47,0	1/1:10,3:13:28.75:285,29,0	0/0:11,0:11:31.08:0,31,289	0/0:16,0:16:38.45:0,38,381	0/0:18,0:18:39.22:0,39,424	1/1:19,1:20:29.99:275,30,0	1/1:9,0:9:20.96:198,21,0	1/1:26,1:27:44.97:397,45,0	1/1:8,1:9:20.98:191,21,0
chr10	67266654	.	G	GCCTCCC	2129.13	PASS	AB=1.000;AC=33;AF=0.611;AN=54;BaseQRankSum=-1.099;DP=326;FS=0.000;HRun=0;HaplotypeScore=91.3167;InbreedingCoeff=0.7344;MQ=78.63;MQ0=23;MQRankSum=-4.868;QD=18.35;ReadPosRankSum=-3.287;VQSLOD=2.2545;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:30.03:0,30,409	0/1:3,0:3:4.22:4,0,83	0/0:57,0:16:36:0,36,466	0/0:48,0:23:46.82:0,47,562	0/0:9,0:9:9:0,9,90	1/1:3,0:5:9.03:238,9,0	1/1:6,0:7:15.01:182,15,0	0/0:17,0:18:43.76:0,44,550	1/1:4,0:3:6:60,6,0	1/1:8,0:8:15.86:181,16,0	1/1:4,0:4:6.01:83,6,0	1/1:6,0:4:5.93:40,6,0	0/0:19,0:18:48.13:0,48,1000	1/1:0,0:3:3.01:52,3,0	1/1:1,2:4:3.01:102,3,0	1/1:2,2:5:3.01:100,3,0	0/0:14,0:14:35.83:0,36,506	1/1:2,0:6:3.01:71,3,0	1/1:11,0:10:17.98:157,18,0	1/1:7,0:7:11.98:144,12,0	1/1:9,1:14:14.59:301,15,0	0/0:13,0:12:35.75:0,36,566	0/0:10,0:10:27.09:0,27,547	0/0:8,0:8:24.01:0,24,381	1/1:5,1:11:15.03:358,15,0	1/1:7,1:7:3.01:72,3,0	1/1:3,5:10:8.92:181,9,0	./.
chr10	67266669	.	AAAAAAAAAAAG	A	825.86	PASS	AB=0.706;AC=15;AF=0.278;AN=54;BaseQRankSum=1.388;DP=364;FS=27.092;HRun=0;HaplotypeScore=93.1210;InbreedingCoeff=0.3612;MQ=71.32;MQ0=31;MQRankSum=1.007;QD=8.69;ReadPosRankSum=-0.457;VQSLOD=-0.1716;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:21.07:0,21,441	0/0:4,0:4:8.94:0,9,100	0/0:82,0:16:36.07:0,36,698	0/0:64,0:24:38.91:0,39,893	0/0:14,0:14:29.93:0,30,709	0/1:4,7:11:17.91:101,0,18	1/1:3,1:4:2.66:90,3,0	0/0:14,0:13:20.91:0,21,219	1/1:10,0:9:3.01:67,3,0	1/1:1,1:2:1.20:17,1,0	1/1:0,8:8:17.80:119,18,0	0/1:3,9:10:52.24:172,0,52	0/0:19,0:18:42.14:0,42,1828	0/0:1,0:1:0:0,0,0	0/0:1,0:1:0.47:0,0,1	0/0:3,0:3:2.49:0,2,6	0/0:18,0:18:38.91:0,39,708	0/0:2,0:1:0:0,0,0	0/1:4,6:8:99:181,0,114	1/1:3,6:9:9.90:93,10,0	0/1:11,7:18:2.84:14,0,3	0/0:10,0:9:24.07:0,24,890	0/0:10,0:10:30.05:0,30,1027	0/0:7,0:6:18.06:0,18,719	0/0:6,0:6:8.14:0,8,46	0/1:11,0:10:99:123,0,124	0/0:3,0:3:1.55:0,2,4	./.
chr10	67266670	.	AAAAAAAAAAG	A	790.26	PASS	AB=0.921;AC=15;AF=0.288;AN=52;BaseQRankSum=2.401;DP=367;FS=23.058;HRun=0;HaplotypeScore=92.9264;InbreedingCoeff=0.3840;MQ=69.91;MQ0=31;MQRankSum=0.486;QD=8.41;ReadPosRankSum=-0.649;VQSLOD=0.0177;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:21.07:0,21,370	0/0:3,0:3:8.92:0,9,74	0/0:81,0:16:35.29:0,35,550	0/0:63,0:23:23.43:0,23,792	0/0:17,0:17:38.77:0,39,739	0/1:10,1:11:24.88:88,0,25	1/1:4,0:4:2.83:74,3,0	0/0:17,0:16:30.14:0,30,411	1/1:2,8:9:3.01:83,3,0	1/1:2,0:2:2.03:18,2,0	1/1:8,0:8:17.80:119,18,0	0/1:12,0:10:32.33:141,0,32	0/0:20,0:19:45.13:0,45,1715	./.	0/0:1,0:1:0:0,0,0	0/0:3,0:3:1.77:0,2,4	0/0:17,0:17:35.99:0,36,588	0/0:2,0:1:0:0,0,0	0/1:10,0:8:97.60:166,0,98	1/1:9,0:9:12.11:97,12,0	0/1:17,0:17:0.03:15,0,0	0/0:10,0:9:22.30:0,22,763	0/0:11,0:11:30.10:0,30,972	0/0:7,0:6:18.06:0,18,649	0/0:6,0:6:6.36:0,6,29	0/1:6,5:10:99:141,0,107	0/0:3,0:3:0.89:0,1,2	./.
chr10	67266775	.	TTC	T	1964.81	PASS	AB=0.958;AC=10;AF=0.185;AN=54;BaseQRankSum=0.354;DP=603;FS=2.533;HRun=0;HaplotypeScore=105.9656;InbreedingCoeff=0.5628;MQ=69.56;MQ0=6;MQRankSum=2.012;QD=12.28;ReadPosRankSum=3.058;VQSLOD=3.3552;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,28:34:66.21:812,66,0	1/1:2,7:9:15.05:185,15,0	0/1:51,0:31:11.23:11,0,540	0/0:63,1:34:18.72:0,19,491	1/1:4,15:19:44.98:487,45,0	0/0:25,0:25:9.11:0,9,120	0/0:11,0:11:3.01:0,3,46	0/0:22,1:23:8.20:0,8,602	./.	0/0:17,0:17:33.89:0,34,368	0/0:13,0:13:8.98:0,9,89	0/0:14,0:13:6.01:0,6,72	0/0:27,0:27:63.21:0,63,1004	0/0:16,0:16:3:0,3,25	0/0:25,0:24:10.57:0,11,160	0/0:19,0:19:0:0,0,0	1/1:4,21:25:51.13:612,51,0	0/0:15,0:15:17.45:0,17,170	0/0:20,0:20:31.28:0,31,362	0/0:17,0:16:17.96:0,18,191	0/0:15,0:14:3.01:0,3,37	0/0:16,0:16:33.11:0,33,538	0/0:17,0:17:39.11:0,39,594	0/1:20,2:21:16.69:17,0,742	0/0:10,0:10:2.98:0,3,22	0/0:20,0:19:45.10:0,45,570	0/0:29,0:28:38.97:0,39,437	0/0:12,0:12:25.25:0,25,251
chr10	67267093	.	CTTGT	C	14747.74	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=14.497;DP=666;FS=4.965;HRun=0;HaplotypeScore=111.4286;InbreedingCoeff=0.9824;MQ=73.94;MQ0=0;MQRankSum=-3.375;QD=35.37;ReadPosRankSum=3.750;VQSLOD=4.9652;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,105,2538	0/0:10,0:10:30.10:0,30,752	0/0:28,0:27:34.73:0,35,1069	0/0:26,0:27:66.09:0,66,1534	0/0:27,0:27:69.24:0,69,1707	1/1:3,15:18:36.12:614,36,0	1/1:7,26:33:63.22:1073,63,0	1/1:18,17:35:51.13:804,51,0	1/1:5,17:22:42.14:716,42,0	1/1:5,19:24:57.19:965,57,0	1/1:1,8:9:21.07:358,21,0	1/1:5,26:31:75.26:1279,75,0	0/0:20,0:20:54.17:0,54,1293	1/1:3,23:25:48.16:818,48,0	1/1:2,22:24:48.16:818,48,0	1/1:1,24:25:60.21:1023,60,0	0/0:29,0:29:87.28:0,87,2036	1/1:8,19:27:5.62:821,6,0	1/1:7,18:25:54.14:865,54,0	1/1:2,15:17:42.14:701,42,0	1/1:2,16:18:27.09:445,27,0	0/0:23,0:23:63.22:0,63,1569	0/0:25,0:25:57.18:0,57,1272	0/0:20,0:20:48.16:0,48,1197	1/1:0,11:11:30.10:512,30,0	1/1:4,20:24:60.18:991,60,0	1/1:4,31:34:75.26:1279,75,0	1/1:0,13:13:39.13:665,39,0
chr10	67267953	.	A	AACACAC	7980.94	PASS	AB=0.756;AC=35;AF=0.625;AN=56;BaseQRankSum=0.129;DP=348;FS=0.000;HRun=0;HaplotypeScore=86.9923;InbreedingCoeff=0.7692;MQ=55.06;MQ0=2;MQRankSum=-10.052;QD=38.56;ReadPosRankSum=-1.463;VQSLOD=4.3179;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:42.13:0,42,849	0/0:5,0:5:15.05:0,15,317	0/0:24,0:15:18.02:0,18,279	0/0:10,0:6:3.48:0,3,50	0/0:7,0:17:12.94:0,13,90	1/1:2,0:4:3.01:38,3,0	1/1:8,3:11:6.02:198,6,0	0/1:23,0:34:42.59:44,0,43	1/1:5,4:9:18.06:549,18,0	1/1:3,7:11:21.07:691,21,0	1/1:5,5:12:18.06:526,18,0	1/1:2,2:4:6.02:198,6,0	0/0:14,0:14:42.11:0,42,789	1/1:6,2:11:15.05:353,15,0	1/1:4,7:11:18.06:595,18,0	1/1:4,2:6:6.02:198,6,0	0/0:20,0:19:45.11:0,45,902	1/1:10,5:17:27.09:796,27,0	1/1:6,3:10:27.09:677,27,0	1/1:6,4:10:12.04:371,12,0	1/1:9,0:9:3.01:99,3,0	0/0:6,0:6:15.04:0,15,252	0/0:11,0:11:21:0,21,361	0/0:10,0:10:18.02:0,18,307	1/1:5,8:14:18.06:595,18,0	1/1:7,6:13:24.08:761,24,0	1/1:6,1:7:6.02:198,6,0	1/1:2,12:14:33.11:1092,33,0
chr10	67268020	.	A	AAT	2677.10	PASS	AB=1.000;AC=11;AF=0.275;AN=40;BaseQRankSum=-2.253;DP=210;FS=1.396;HRun=0;HaplotypeScore=49.0695;InbreedingCoeff=0.5956;MQ=81.21;MQ0=3;MQRankSum=3.748;QD=28.48;ReadPosRankSum=-1.992;VQSLOD=3.8335;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,9:9:18.06:315,18,0	1/1:0,2:2:3.01:53,3,0	0/1:18,0:6:12.91:13,0,42	0/0:40,0:20:3.16:0,3,81	1/1:1,2:3:6.02:105,6,0	0/0:1,0:1:3.01:0,3,41	./.	1/1:5,36:42:99:1704,108,0	./.	0/0:5,0:5:12.04:0,12,162	0/0:2,0:2:6.02:0,6,80	./.	0/0:3,0:3:6.02:0,6,81	./.	0/0:1,0:1:3.01:0,3,41	0/0:3,0:3:9.03:0,9,122	1/1:3,16:19:36.12:630,36,0	0/0:15,0:15:33.11:0,33,446	0/0:4,0:4:12:0,12,129	0/0:3,0:3:9.03:0,9,121	./.	./.	./.	./.	0/0:12,0:12:23.99:0,24,301	0/0:3,0:3:6.02:0,6,81	0/0:6,0:6:18.06:0,18,241	0/0:17,0:17:47.97:0,48,576
chr10	67271364	.	AAATAAATG	A	13428.87	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=10.412;DP=441;FS=7.887;HRun=0;HaplotypeScore=139.6542;InbreedingCoeff=0.8979;MQ=47.35;MQ0=6;MQRankSum=-9.501;QD=41.19;ReadPosRankSum=1.858;VQSLOD=3.8168;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,17:22:35.92:812,36,0	1/1:3,6:9:15.02:332,15,0	0/0:15,0:7:15.04:0,15,439	0/0:11,0:4:10.28:0,10,339	1/1:4,18:22:36.01:658,36,0	1/1:3,10:13:24.08:623,24,0	1/1:3,9:11:9.03:233,9,0	0/0:33,0:30:60.14:0,60,1633	1/1:2,10:10:15.05:389,15,0	1/1:4,10:14:24.07:547,24,0	1/1:3,22:25:60.09:1361,60,0	1/1:5,12:17:23.95:449,24,0	0/0:24,0:24:51.17:0,51,2057	1/1:1,10:11:24.08:623,24,0	1/1:0,16:16:33.11:856,33,0	1/1:2,7:9:21.07:545,21,0	1/1:6,11:17:30.10:778,30,0	1/1:8,6:12:6.02:156,6,0	1/1:6,13:17:39.09:850,39,0	1/1:3,18:21:50.93:993,51,0	1/1:4,6:9:2.97:20,3,0	0/0:7,0:7:12.03:0,12,282	0/0:12,0:12:27.08:0,27,926	0/0:13,0:13:30.10:0,30,1260	1/1:3,12:15:30.06:720,30,0	1/1:3,24:27:63.11:1377,63,0	1/1:0,18:18:42.10:1032,42,0	1/1:2,0:2:6:74,6,0
chr10	67271661	.	GT	G	9093.58	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=11.357;DP=648;FS=1.032;HRun=9;HaplotypeScore=62.5312;InbreedingCoeff=0.9683;MQ=70.17;MQ0=1;MQRankSum=-0.259;QD=22.45;ReadPosRankSum=4.467;VQSLOD=5.5371;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,129,1411	0/0:9,0:9:24.07:0,24,277	0/0:20,0:19:30.53:0,31,335	0/0:11,0:8:13.31:0,13,110	0/0:25,1:26:44.76:0,45,760	1/1:0,23:23:57.03:522,57,0	1/1:3,21:24:51.02:467,51,0	0/0:39,0:41:92.85:0,93,993	1/1:2,29:31:78.03:713,78,0	1/1:1,17:18:51.02:463,51,0	1/1:1,26:27:69.02:631,69,0	1/1:0,26:26:66.04:604,66,0	0/0:17,0:17:39.10:0,39,439	1/1:3,18:22:50.05:445,50,0	1/1:2,27:30:74.07:665,74,0	1/1:3,29:32:84.04:769,84,0	0/0:23,0:23:60.12:0,60,658	1/1:2,24:26:66.03:604,66,0	1/1:3,16:18:45.01:407,45,0	1/1:5,18:23:54.01:494,54,0	1/1:1,10:12:26.05:226,26,0	0/0:9,1:10:2.63:0,3,284	0/0:14,0:14:39.12:0,39,450	0/0:26,0:26:72.01:0,72,788	1/1:2,18:20:51.03:466,51,0	1/1:2,23:25:69.04:631,69,0	1/1:2,36:38:90.05:823,90,0	1/1:3,6:9:18.01:165,18,0
chr10	67272423	.	TCC	T	10134.79	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=1.287;DP=579;FS=3.838;HRun=7;HaplotypeScore=80.5025;InbreedingCoeff=0.9981;MQ=80.17;MQ0=4;MQRankSum=-1.385;QD=29.81;ReadPosRankSum=5.389;VQSLOD=4.7041;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:53.52:0,54,392	0/0:7,0:7:20.96:0,21,168	0/0:20,0:20:54.09:0,54,791	0/0:19,0:20:21.44:0,21,568	0/0:4,0:31:78.01:0,78,744	1/1:0,20:18:39.12:497,39,0	1/1:2,13:15:30.10:382,30,0	0/0:33,0:33:99:0,99,1521	1/1:0,17:17:42.13:535,42,0	1/1:0,22:22:60.17:739,60,0	1/1:1,26:26:63.16:782,63,0	1/1:0,20:20:51.16:650,51,0	0/0:18,0:18:54.17:0,54,893	1/1:0,12:12:33.11:421,33,0	1/1:4,30:33:72.22:918,72,0	1/1:2,23:25:54.17:688,54,0	0/0:21,0:21:62.83:0,63,490	1/1:1,18:19:42.13:535,42,0	1/1:2,18:20:54.12:646,54,0	1/1:1,27:28:72.22:917,72,0	1/1:0,13:13:21.07:268,21,0	0/0:26,0:26:75.21:0,75,1201	0/0:24,0:24:72.19:0,72,1175	0/0:17,0:17:45.14:0,45,761	1/1:1,16:17:39.12:497,39,0	1/1:0,21:21:63.12:742,63,0	1/1:0,17:17:42.13:535,42,0	1/1:1,12:13:30.09:382,30,0
chr10	67272430	.	CA	C	1773.64	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-4.122;DP=599;FS=0.542;HRun=1;HaplotypeScore=100.2443;InbreedingCoeff=0.9973;MQ=78.96;MQ0=4;MQRankSum=-4.582;QD=34.78;ReadPosRankSum=1.902;VQSLOD=3.5367;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,21:21:54.18:750,54,0	1/1:0,7:7:21.07:286,21,0	0/0:18,0:18:48.89:0,49,615	0/0:21,0:21:32.20:0,32,527	0/0:29,0:29:36.45:0,36,403	0/0:21,0:19:40.67:0,41,227	0/0:17,0:17:41.01:0,41,257	0/0:37,0:37:99:0,108,1406	0/0:18,0:18:43.60:0,44,244	0/0:23,0:23:61.83:0,62,398	0/0:27,0:26:55.13:0,55,305	0/0:20,0:20:48.93:0,49,260	0/0:20,0:20:60.16:0,60,809	0/0:13,0:13:31.90:0,32,172	0/0:32,0:31:74.94:0,75,417	0/0:23,0:23:52.27:0,52,284	1/1:0,23:23:63.21:879,63,0	0/0:21,0:21:49.13:0,49,268	0/0:19,0:19:55.98:0,56,353	0/0:27,0:27:68.20:0,68,350	0/0:15,0:15:23.28:0,23,133	0/0:27,0:27:75.21:0,75,1026	0/0:24,0:24:72.17:0,72,993	0/0:17,0:17:51.12:0,51,686	0/0:18,0:18:42.57:0,43,236	0/0:22,0:22:61.50:0,61,390	0/0:23,0:23:58.06:0,58,354	0/0:15,0:15:37.45:0,37,213
chr10	67272767	.	T	TGTAAA	26586.80	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-16.764;DP=632;FS=3.323;HRun=0;HaplotypeScore=98.2536;InbreedingCoeff=0.9845;MQ=78.76;MQ0=0;MQRankSum=-4.187;QD=72.84;ReadPosRankSum=1.009;VQSLOD=6.3850;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:93.32:0,93,1888	0/0:9,0:9:24.08:0,24,487	0/0:21,0:21:48.09:0,48,844	0/0:15,0:15:36.98:0,37,689	0/0:34,0:34:93.32:0,93,1889	1/1:5,21:26:63.22:1909,63,0	1/1:8,12:20:33.11:997,33,0	0/0:34,0:34:72.25:0,72,1449	1/1:2,22:24:63.22:1908,63,0	1/1:5,19:25:60.21:1753,60,0	1/1:2,18:20:51.18:1545,51,0	1/1:1,12:13:33.11:999,33,0	0/0:29,0:29:81.26:0,81,1596	1/1:3,9:13:27.09:817,27,0	1/1:1,19:20:54.19:1634,54,0	1/1:4,15:20:45.15:1362,45,0	0/0:32,0:32:84.27:0,84,1646	1/1:3,16:19:45.15:1364,45,0	1/1:12,19:34:81.24:2266,81,0	1/1:3,22:25:66.23:1948,66,0	1/1:4,19:25:60.16:1582,60,0	0/0:23,0:23:60.21:0,60,1218	0/0:18,0:18:48.16:0,48,975	0/0:18,0:18:54.19:0,54,1066	1/1:1,19:20:57.20:1725,57,0	1/1:5,19:25:66.23:1885,66,0	1/1:3,30:34:90.31:2710,90,0	1/1:1,1:2:6.02:181,6,0
chr10	67272856	.	C	CT	3076.73	PASS	AB=1.000;AC=12;AF=0.214;AN=56;BaseQRankSum=-13.377;DP=451;FS=5.444;HRun=7;HaplotypeScore=78.9901;InbreedingCoeff=0.7814;MQ=67.57;MQ0=0;MQRankSum=2.779;QD=25.85;ReadPosRankSum=-3.055;VQSLOD=3.0082;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,14:15:39.12:471,39,0	1/1:0,3:3:6.02:72,6,0	0/0:14,0:13:22.84:0,23,171	0/1:4,0:4:5.58:6,0,39	1/1:1,30:31:90.28:1087,90,0	0/0:15,0:15:43.02:0,43,225	0/0:8,0:8:20.36:0,20,117	1/1:7,30:37:90.23:1051,90,0	0/0:11,0:11:31.16:0,31,152	0/1:11,0:11:1.48:1,0,62	0/0:25,0:25:61.57:0,62,286	0/0:13,0:13:30.47:0,30,140	0/0:18,0:18:45.05:0,45,429	0/0:12,0:12:31:0,31,150	0/0:21,0:21:27.86:0,28,204	0/0:18,0:18:44.51:0,45,208	1/1:0,17:18:48.01:558,48,0	0/0:16,0:16:40.13:0,40,209	0/0:22,0:22:43.63:0,44,215	0/0:17,0:17:45.81:0,46,242	0/0:2,0:2:5.80:0,6,32	0/0:14,0:14:42.05:0,42,400	0/0:22,0:22:60.09:0,60,579	0/0:8,0:8:21.03:0,21,203	0/0:18,0:18:41.79:0,42,199	0/0:19,0:19:50.51:0,51,256	0/0:34,0:34:87.19:0,87,418	0/0:5,0:5:5.75:0,6,33
chr10	67272921	.	GAA	G	6960.67	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=15.487;DP=438;FS=3.174;HRun=10;HaplotypeScore=115.7576;InbreedingCoeff=0.9824;MQ=66.63;MQ0=0;MQRankSum=-13.987;QD=30.13;ReadPosRankSum=1.284;VQSLOD=4.7020;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:54.18:0,54,857	0/0:11,0:11:30.10:0,30,476	0/0:16,0:16:30.05:0,30,421	0/0:11,0:11:21.81:0,22,265	0/0:33,0:33:96.32:0,96,1502	1/1:4,16:20:48.12:535,48,0	1/1:1,11:12:33.09:368,33,0	0/0:3,0:26:57.39:0,57,197	1/1:2,12:14:36.10:401,36,0	1/1:1,16:17:48.12:535,48,0	1/1:2,22:24:66.17:734,66,0	1/1:0,7:7:21.06:234,21,0	0/0:17,0:17:51.17:0,51,808	1/1:0,9:9:27.07:301,27,0	1/1:3,12:15:39.08:425,39,0	1/1:2,15:17:45.11:501,45,0	0/0:21,0:21:57.19:0,57,899	1/1:5,6:11:21.03:233,21,0	1/1:3,11:14:39.06:421,39,0	1/1:0,15:15:45.12:501,45,0	1/1:0,3:3:6.01:67,6,0	0/0:18,0:18:54.17:0,54,833	0/0:22,0:22:60.18:0,60,910	0/0:10,0:11:30.10:0,30,457	1/1:0,13:13:39.11:435,39,0	1/1:3,17:20:54.09:602,54,0	1/1:0,13:13:39.11:435,39,0	1/1:0,7:7:21.06:234,21,0
chr10	67272940	.	A	AG	8241.98	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=16.760;DP=449;FS=0.358;HRun=4;HaplotypeScore=107.7340;InbreedingCoeff=0.9665;MQ=70.05;MQ0=0;MQRankSum=-14.914;QD=34.63;ReadPosRankSum=1.432;VQSLOD=4.2809;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:63.18:0,63,714	0/0:11,0:11:33.01:0,33,346	0/0:15,0:15:42.01:0,42,437	0/0:13,0:12:6.18:0,6,270	0/0:32,0:32:90.24:0,90,1011	1/1:3,18:21:57.12:750,57,0	1/1:3,11:14:36.04:449,36,0	0/0:31,0:31:84.22:0,84,938	1/1:2,14:16:42.14:573,42,0	1/1:1,16:17:51.16:677,51,0	1/1:7,15:21:51.08:635,51,0	1/1:1,9:10:24.01:304,24,0	0/0:17,0:17:48.08:0,48,507	1/1:1,10:11:30.10:405,30,0	1/1:4,13:17:42.13:557,42,0	1/1:1,14:15:42.14:573,42,0	0/0:21,0:21:51.15:0,51,578	1/1:2,6:8:18.06:246,18,0	1/1:3,10:13:30.10:410,30,0	1/1:1,13:14:42:523,42,0	1/1:2,1:3:6.02:82,6,0	0/0:17,0:17:51.15:0,51,578	0/0:21,0:21:60.14:0,60,662	0/0:11,0:11:30.04:0,30,326	1/1:1,14:15:45.07:568,45,0	1/1:1,18:19:54.18:737,54,0	1/1:2,14:16:42.08:548,42,0	1/1:2,5:7:15.05:205,15,0
chr10	67273231	.	CACTG	C	4530.83	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=10.175;DP=492;FS=28.014;HRun=0;HaplotypeScore=82.7730;InbreedingCoeff=0.9307;MQ=76.27;MQ0=0;MQRankSum=-2.033;QD=49.25;ReadPosRankSum=2.295;VQSLOD=3.3057;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,59:60:99:2913,148,0	1/1:0,4:4:12.04:240,12,0	0/0:31,0:30:90.31:0,90,2259	0/0:28,0:27:74.93:0,75,1956	0/0:23,0:23:69.22:0,69,1856	0/0:5,0:5:12.04:0,12,335	0/0:11,0:11:33.11:0,33,887	0/0:48,0:48:99:0,138,3624	0/0:14,0:14:42.14:0,42,1170	0/0:7,0:7:18.06:0,18,504	0/0:17,0:17:51.18:0,51,1423	0/0:7,0:7:18.06:0,18,503	0/0:22,0:22:66.23:0,66,1813	0/0:8,0:8:24.08:0,24,671	0/0:12,0:12:36.12:0,36,1006	0/0:13,0:13:33.11:0,33,900	1/1:0,28:28:69.24:1378,69,0	0/0:10,0:10:30.10:0,30,839	0/0:7,0:7:21.07:0,21,573	0/0:8,0:8:21.07:0,21,586	0/0:18,0:18:51.18:0,51,1427	0/0:22,0:22:63.22:0,63,1739	0/0:25,0:25:75.26:0,75,2096	0/0:30,0:29:90.31:0,90,2430	0/0:6,0:6:18.06:0,18,502	0/0:12,0:12:33.11:0,33,924	0/0:14,0:14:42.14:0,42,1167	0/0:2,0:2:6.02:0,6,168
chr10	67273574	.	GCTACTACTACTA	G	8071.71	PASS	AB=1.000;AC=30;AF=0.556;AN=54;BaseQRankSum=8.032;DP=580;FS=1.135;HRun=0;HaplotypeScore=213.9371;InbreedingCoeff=0.7884;MQ=47.07;MQ0=16;MQRankSum=-7.910;QD=24.02;ReadPosRankSum=3.613;VQSLOD=3.8923;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:30.10:0,30,1217	0/0:9,0:11:21.07:0,21,1014	0/0:18,0:4:3.90:0,4,72	0/0:24,0:5:0.47:0,0,1	0/0:7,0:21:22.42:0,22,384	1/1:11,12:22:9.03:283,9,0	1/1:14,8:22:9.03:310,9,0	0/0:36,0:36:57.09:0,57,1491	1/1:8,19:27:27.09:905,27,0	1/1:8,1:22:9.21:111,9,0	0/0:3,0:7:0.47:0,0,1	1/1:11,12:23:27.09:862,27,0	0/0:26,0:26:48.16:0,48,2193	1/1:7,9:16:15.05:477,15,0	1/1:5,23:29:39.13:1237,39,0	1/1:14,23:38:44.82:1467,45,0	0/0:13,0:21:12.04:0,12,603	1/1:7,9:15:14.83:509,15,0	1/1:10,0:17:6.43:44,6,0	1/1:1,5:6:12.04:360,12,0	0/1:19,0:19:0.03:0,0,0	0/1:9,0:23:0.49:0,0,514	0/0:20,0:20:24.08:0,24,728	0/0:25,0:25:57.20:0,57,2694	./.	1/1:8,0:21:5.96:63,6,0	1/1:10,15:25:33.11:1049,33,0	1/1:3,4:7:12.04:395,12,0
chr10	67274378	.	C	CT	1978.11	PASS	AB=0.788;AC=28;AF=0.500;AN=56;BaseQRankSum=-2.322;DP=607;FS=2.281;HRun=14;HaplotypeScore=70.3593;InbreedingCoeff=0.1940;MQ=58.97;MQ0=27;MQRankSum=-3.961;QD=5.00;ReadPosRankSum=-2.701;VQSLOD=1.6261;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:38:54.17:0,54,353	0/0:9,0:12:27.71:0,28,165	0/1:31,0:9:7.26:33,0,7	0/0:38,0:13:7.98:0,8,43	0/0:30,2:32:16.15:0,16,218	0/1:8,8:17:47.22:116,0,47	0/1:8,10:17:14.10:122,0,14	1/1:29,5:32:3.33:108,3,0	1/1:3,9:11:11.98:101,12,0	1/1:11,14:25:31.22:260,31,0	1/1:10,5:15:17.94:146,18,0	0/1:5,12:18:8.10:89,0,8	0/0:11,0:10:11.72:0,12,77	0/1:7,9:15:14.58:127,0,15	1/1:6,10:16:13.66:134,14,0	1/1:8,13:21:23.84:199,24,0	0/0:32,1:35:26.84:0,27,273	0/1:15,13:26:2.20:91,0,2	1/1:10,7:16:11.14:120,11,0	0/1:9,7:15:4.96:99,0,5	0/1:9,0:8:13.17:17,0,13	0/1:17,0:14:2.42:2,0,107	0/0:13,0:15:18.55:0,19,101	0/0:23,0:24:37.24:0,37,233	0/1:20,3:22:4.71:101,0,5	0/1:21,3:21:12.25:120,0,12	1/1:11,11:21:1.75:121,2,0	0/1:8,3:12:7.43:55,0,7
chr10	67274383	.	T	TC	147.02	PASS	AB=0.859;AC=4;AF=0.071;AN=56;BaseQRankSum=1.839;DP=582;FS=0.629;HRun=0;HaplotypeScore=63.6934;InbreedingCoeff=0.2793;MQ=57.71;MQ0=28;MQRankSum=-3.923;QD=2.58;ReadPosRankSum=2.350;VQSLOD=2.2371;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:39:99:0,103,1127	0/0:12,0:12:33.02:0,33,398	0/0:30,0:9:4.53:0,5,60	0/0:36,0:11:20.21:0,20,172	0/0:30,0:28:78.42:0,78,841	0/0:16,0:16:13.75:0,14,227	0/0:16,0:15:11:0,11,115	0/1:20,12:30:99:219,0,130	1/1:10,0:9:4.58:13,5,0	0/0:23,0:23:22.62:0,23,282	0/0:16,0:15:23.90:0,24,191	0/0:18,0:18:20.95:0,21,171	0/0:11,0:10:29.97:0,30,312	0/1:14,0:13:6.21:6,0,88	0/0:16,0:15:7.44:0,7,121	0/0:22,0:21:25.08:0,25,216	0/0:36,0:35:75.53:0,76,862	0/0:27,0:25:30.92:0,31,250	0/0:17,0:15:21.79:0,22,173	0/0:18,0:16:32.10:0,32,248	0/0:7,0:6:13.53:0,14,115	0/0:18,0:15:35.97:0,36,400	0/0:14,0:14:33.01:0,33,351	0/0:26,0:26:69.05:0,69,772	0/0:22,0:21:45.52:0,46,393	0/0:21,0:18:37.38:0,37,337	0/0:20,0:19:6.73:0,7,133	0/0:11,0:11:22.02:0,22,197
chr10	67274952	.	C	CA	12311.30	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=15.731;DP=755;FS=10.916;HRun=7;HaplotypeScore=104.7337;InbreedingCoeff=0.9773;MQ=65.16;MQ0=6;MQRankSum=1.082;QD=29.52;ReadPosRankSum=1.883;VQSLOD=3.9591;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,108,1032	0/0:5,0:5:12.02:0,12,116	0/0:51,0:22:17.37:0,17,284	0/0:36,0:23:6.23:0,6,305	0/0:36,0:36:99:0,99,955	1/1:3,25:28:63.19:761,63,0	1/1:3,21:24:60.18:724,60,0	0/0:32,0:32:78.08:0,78,738	1/1:0,18:18:45.14:544,45,0	1/1:2,42:44:99:1486,123,0	1/1:2,23:25:66.20:793,66,0	1/1:1,19:20:54.17:652,54,0	0/0:25,0:25:66.09:0,66,631	1/1:1,20:21:54.17:652,54,0	1/1:3,28:31:81.25:977,81,0	1/1:3,20:23:28.21:623,28,0	0/0:41,0:41:99:0,111,1060	1/1:7,21:28:72.22:867,72,0	1/1:4,18:19:51.16:613,51,0	1/1:6,20:25:57.17:677,57,0	1/1:3,16:19:33.10:399,33,0	0/0:20,0:20:54.08:0,54,521	0/0:20,0:20:54.08:0,54,520	0/0:34,0:34:87.08:0,87,830	1/1:3,30:33:69.21:833,69,0	1/1:3,20:23:63.13:732,63,0	1/1:1,25:26:66.20:797,66,0	1/1:0,6:6:15.05:181,15,0
chr10	67275224	.	TG	T	1132.32	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=1.128;DP=706;FS=0.000;HRun=3;HaplotypeScore=89.5141;InbreedingCoeff=0.9943;MQ=90.32;MQ0=0;MQRankSum=-1.550;QD=31.45;ReadPosRankSum=-4.021;VQSLOD=1.8377;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,102,1467	0/0:10,0:10:27.09:0,27,387	0/0:27,0:27:78.21:0,78,1043	0/0:28,0:28:22.78:0,23,772	0/0:34,0:34:99:0,99,1378	0/0:28,0:28:84.28:0,84,1208	0/0:31,0:31:93.30:0,93,1317	1/1:1,35:36:99:1227,102,0	0/0:24,0:24:72.24:0,72,1035	0/0:28,0:28:84.26:0,84,1176	0/0:16,0:16:48.16:0,48,686	0/0:20,0:20:60.19:0,60,845	0/0:27,0:27:81.27:0,81,1161	0/0:23,0:23:63.20:0,63,888	0/0:27,0:27:81.21:0,81,1091	0/0:29,0:29:87.28:0,87,1233	0/0:19,0:19:57.17:0,57,799	0/0:24,0:24:72.23:0,72,1017	0/0:20,0:20:57.17:0,57,784	0/0:30,0:30:90.29:0,90,1277	0/0:33,0:33:87.24:0,87,1196	0/0:22,0:22:63.21:0,63,902	0/0:19,0:19:57.16:0,57,768	0/0:27,0:27:81.24:0,81,1126	0/0:26,0:26:78.26:0,78,1123	0/0:37,0:37:99:0,111,1580	0/0:18,0:18:51.16:0,51,716	0/0:8,0:8:24.08:0,24,345
chr10	67275924	.	G	GTGCAGCATACACACTCT	51143.42	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-5.819;DP=592;FS=6.730;HRun=0;HaplotypeScore=186.9571;InbreedingCoeff=0.9764;MQ=57.25;MQ0=2;MQRankSum=-13.234;QD=109.51;ReadPosRankSum=0.130;VQSLOD=3.9183;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,8:43:59.95:3605,60,0	1/1:2,5:9:18.06:1397,18,0	0/0:17,0:14:36.08:0,36,996	0/0:22,0:20:44.80:0,45,1104	1/1:3,8:15:32.72:1025,33,0	1/1:5,10:25:45.04:3044,45,0	1/1:11,4:25:39.13:2438,39,0	1/1:31,0:30:84.25:4514,84,0	1/1:2,8:15:33.11:2729,33,0	1/1:5,4:18:45.11:2425,45,0	1/1:5,5:13:24:1518,24,0	1/1:6,10:30:45.12:3243,45,0	0/0:21,0:21:45.15:0,45,2109	1/1:7,6:22:33.03:2041,33,0	1/1:12,17:40:72.05:4703,72,0	1/1:7,9:28:42.11:2766,42,0	1/1:4,5:16:18.06:1385,18,0	1/1:8,5:17:36.12:2730,36,0	1/1:8,2:16:48.16:2671,48,0	1/1:4,7:18:35.69:1612,36,0	1/1:9,3:26:12:609,12,0	0/0:12,0:12:36.12:0,36,1641	0/0:21,0:21:60.21:0,60,2559	0/0:32,0:32:81.23:0,81,3675	1/1:3,5:14:18.02:1265,18,0	1/1:5,5:20:53.95:3233,54,0	1/1:5,4:20:26.76:1443,27,0	1/1:2,1:4:9.03:748,9,0
chr10	67275927	.	CG	C	467.23	PASS	AB=0.878;AC=3;AF=0.054;AN=56;BaseQRankSum=0.065;DP=422;FS=2.303;HRun=1;HaplotypeScore=175.8040;InbreedingCoeff=-0.0606;MQ=63.44;MQ0=2;MQRankSum=-4.452;QD=8.65;ReadPosRankSum=-2.279;VQSLOD=0.4053;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:36.06:0,36,362	0/0:6,0:6:14.74:0,15,92	0/0:17,0:14:39.13:0,39,595	0/0:23,0:21:54.89:0,55,704	0/1:13,0:13:7.30:7,0,136	0/0:17,0:17:32.40:0,32,203	0/0:14,0:14:35.54:0,36,446	0/1:13,18:30:99:538,0,401	0/0:13,0:13:35.37:0,35,252	0/0:11,0:11:29.78:0,30,290	0/0:10,1:10:20.75:0,21,161	0/0:15,0:15:29.91:0,30,184	0/0:22,0:22:48.15:0,48,738	0/0:12,0:12:17.65:0,18,110	0/0:24,0:24:51.33:0,51,344	0/0:17,0:17:26.48:0,26,166	0/0:10,0:10:17.75:0,18,135	0/0:10,0:10:20.80:0,21,187	0/0:8,0:8:23.91:0,24,276	0/0:12,0:12:22.75:0,23,164	0/1:10,0:10:14.12:14,0,181	0/0:12,0:12:36.12:0,36,575	0/0:22,0:22:60.20:0,60,958	0/0:31,0:31:87.25:0,87,1350	0/0:7,1:7:14.72:0,15,92	0/0:12,0:12:32.76:0,33,344	0/0:11,0:11:11.81:0,12,74	0/0:3,0:3:5.97:0,6,66
chr10	67276115	.	AAAAAAAAAAAAGAAAAAG	A	1508	PASS	AC=26;AF=0.565;AN=46;BaseQRankSum=0.994;DP=167;FS=3.019;HRun=0;HaplotypeScore=64.9020;InbreedingCoeff=0.6922;MQ=28.43;MQ0=28;MQRankSum=-0.347;QD=19.09;ReadPosRankSum=1.534;VQSLOD=1.5941;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:6:10.15:0,10,287	0/0:4,0:4:6.02:0,6,196	./.	0/0:12,0:1:3.01:0,3,59	0/0:9,0:9:14.01:0,14,237	./.	1/1:6,0:4:8.97:176,9,0	0/0:8,0:7:13.29:0,13,432	1/1:2,0:1:3.01:49,3,0	1/1:4,10:13:23.82:290,24,0	1/1:3,8:10:2.92:60,3,0	./.	0/0:8,0:7:18.06:0,18,1060	1/1:3,0:2:2.95:32,3,0	1/1:4,0:2:6.01:59,6,0	./.	0/0:5,0:4:5.99:0,6,86	1/1:7,0:3:2.85:16,3,0	1/1:2,4:5:11.95:293,12,0	1/1:3,0:3:5.72:29,6,0	1/1:3,0:3:9.03:152,9,0	0/0:6,0:5:15.05:0,15,605	0/0:9,0:9:27.05:0,27,1387	0/0:11,0:7:12:0,12,493	1/1:10,0:7:15.88:276,16,0	1/1:6,0:4:9:225,9,0	./.	1/1:4,0:3:2.98:22,3,0
chr10	67276120	.	AAAAAAAG	A	499.46	PASS	AB=1.000;AC=15;AF=0.300;AN=50;BaseQRankSum=-1.252;DP=167;FS=0.000;HRun=0;HaplotypeScore=42.7913;InbreedingCoeff=0.4310;MQ=34.27;MQ0=28;MQRankSum=-0.881;QD=9.79;ReadPosRankSum=-1.168;VQSLOD=1.4381;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:4,4:5:9.03:186,9,0	1/1:0,4:4:6.02:124,6,0	0/1:8,0:2:2.75:3,0,12	0/0:12,0:1:3.01:0,3,30	1/1:8,1:9:17.95:209,18,0	./.	0/0:7,0:5:5.45:0,5,48	0/0:8,0:7:8.18:0,8,122	0/0:2,0:1:2.60:0,3,10	0/0:14,0:13:19.50:0,20,101	0/0:11,0:10:2.22:0,2,7	./.	0/0:8,0:7:18.06:0,18,532	0/0:1,0:1:2.88:0,3,15	0/0:5,0:3:2.86:0,3,17	./.	1/1:6,0:5:8.90:98,9,0	0/0:7,0:3:2.88:0,3,15	0/0:6,0:5:8.16:0,8,38	0/1:3,0:3:3.70:7,0,4	0/0:3,0:3:2.08:0,2,9	0/0:6,0:5:15.05:0,15,309	0/0:9,0:9:25.33:0,25,612	0/0:10,0:7:7.52:0,8,184	0/1:9,0:6:4.19:4,0,84	0/0:4,0:3:8.94:0,9,70	1/1:1,0:1:1.55:4,2,0	1/1:3,0:2:0.47:1,0,0
chr10	67277682	.	T	TC	742.60	PASS	AB=0.782;AC=26;AF=0.464;AN=56;BaseQRankSum=-1.443;DP=288;FS=0.808;HRun=0;HaplotypeScore=51.0750;InbreedingCoeff=0.2728;MQ=58.41;MQ0=5;MQRankSum=2.933;QD=4.47;ReadPosRankSum=2.329;VQSLOD=2.6921;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,1:26:22.15:0,22,217	0/0:7,0:7:3.90:0,4,19	0/0:19,0:12:35.60:0,36,433	0/0:10,0:5:8.70:0,9,125	0/0:7,0:12:13.94:0,14,45	0/1:9,2:11:3.18:80,0,3	1/1:2,9:11:14.84:111,15,0	0/1:10,9:19:4.18:153,0,4	1/1:5,0:5:8.65:56,9,0	1/1:8,1:9:4.60:35,5,0	0/0:4,1:5:0.80:0,1,2	0/1:2,2:4:11.04:19,0,11	0/0:3,0:3:6.02:0,6,78	1/1:5,2:6:2.41:17,2,0	0/1:9,2:12:14.44:68,0,14	1/1:6,0:6:3.48:24,3,0	0/0:14,0:15:31.12:0,31,179	0/1:6,8:15:42.11:83,0,42	1/1:5,0:5:2.28:23,2,0	0/1:13,1:13:14.27:14,0,44	0/1:4,0:5:0.67:20,0,1	0/0:6,0:6:18.05:0,18,218	0/0:9,0:9:24.07:0,24,294	0/0:10,0:10:21.95:0,22,282	1/1:8,2:10:2.76:43,3,0	0/1:7,11:18:8.28:108,0,8	1/1:5,5:10:0.79:22,1,0	1/1:4,1:5:5.24:36,5,0
chr10	67281930	.	GCGCGCC	G	596.18	PASS	AB=0.842;AC=17;AF=0.315;AN=54;BaseQRankSum=2.692;DP=261;FS=14.502;HRun=0;HaplotypeScore=126.3012;InbreedingCoeff=0.0089;MQ=37.16;MQ0=9;MQRankSum=-4.434;QD=6.62;ReadPosRankSum=2.265;VQSLOD=1.4326;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:25:23.88:0,24,265	0/1:11,0:10:6.46:6,0,18	0/0:10,0:2:2.68:0,3,11	0/0:5,0:2:3:0,3,27	0/0:11,0:11:3.01:0,3,41	0/0:4,0:4:6.02:0,6,71	0/1:5,1:6:4.85:5,0,29	0/0:11,0:6:12.04:0,12,232	0/1:4,2:6:5.56:6,0,29	0/1:10,3:13:26.31:209,0,26	./.	1/1:2,2:4:8.99:150,9,0	0/0:14,0:14:36.12:0,36,1012	1/1:5,2:7:1.82:5,2,0	0/0:3,2:5:2.68:0,3,36	0/1:6,3:9:0.86:1,0,50	0/0:19,0:19:18.92:0,19,160	0/1:2,3:5:27.27:164,0,27	1/1:2,2:3:5.75:83,6,0	0/1:10,1:11:21.92:22,0,65	0/0:10,0:10:2.96:0,3,26	0/0:10,0:10:14.22:0,14,217	0/0:11,0:10:18.05:0,18,368	0/0:26,0:26:42.14:0,42,899	0/1:5,0:5:21.47:21,0,64	0/1:2,1:3:0.10:55,0,0	0/1:3,1:4:7.04:7,0,33	0/1:2,0:2:4.57:5,0,14
chr10	67281958	.	G	GTA	3935.50	PASS	AB=0.775;AC=30;AF=0.577;AN=52;BaseQRankSum=-2.005;DP=479;FS=1.883;HRun=0;HaplotypeScore=133.4776;InbreedingCoeff=0.7273;MQ=48.65;MQ0=11;MQRankSum=-2.987;QD=18.14;ReadPosRankSum=-1.712;VQSLOD=3.1549;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:35.46:0,35,221	0/1:13,0:12:13.52:14,0,43	0/0:29,0:11:22.66:0,23,339	0/0:26,0:14:13.48:0,13,320	0/0:15,0:15:8.59:0,9,46	./.	1/1:2,13:15:3.01:57,3,0	0/0:27,0:25:31.92:0,32,242	1/1:1,13:15:17.79:294,18,0	1/1:3,23:26:59.34:1031,59,0	./.	1/1:2,9:11:2.96:161,3,0	0/0:18,0:18:32.98:0,33,423	1/1:4,6:10:13.27:200,13,0	1/1:4,9:12:9.03:159,9,0	1/1:4,8:12:18.04:277,18,0	0/0:23,0:23:13.13:0,13,136	0/1:2,9:11:4.24:168,0,4	1/1:6,11:16:22.59:434,23,0	1/1:6,6:12:11.94:111,12,0	1/1:4,20:23:9.03:160,9,0	0/0:19,0:19:30.10:0,30,458	0/0:14,0:14:18.03:0,18,232	0/0:31,0:31:66.06:0,66,945	1/1:2,9:11:3.01:56,3,0	1/1:1,12:13:34.89:505,35,0	1/1:3,5:8:17.93:195,18,0	1/1:0,2:2:6.02:115,6,0
chr10	67282042	.	GGTGTGTGTGTGTGTGT	G	557.69	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=0.689;DP=499;FS=0.000;HRun=0;HaplotypeScore=193.8291;InbreedingCoeff=0.5104;MQ=60.30;MQ0=9;MQRankSum=-2.775;QD=8.71;ReadPosRankSum=-0.029;VQSLOD=2.5654;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:28,8:36:6.02:229,6,0	1/1:7,3:9:3.48:132,3,0	0/0:24,0:19:3.01:0,3,62	0/0:28,0:21:3.01:0,3,46	0/0:11,0:15:15.05:0,15,519	0/0:25,0:25:30.10:0,30,941	0/0:20,0:21:6.02:0,6,181	0/0:14,0:12:7.84:0,8,205	0/0:15,0:15:12.04:0,12,310	0/0:25,0:24:15.05:0,15,395	0/0:5,0:6:3.01:0,3,129	0/0:26,0:25:36.12:0,36,990	0/0:21,0:22:42.14:0,42,1691	0/0:8,0:9:15.05:0,15,435	0/0:22,0:22:21.07:0,21,561	0/0:15,0:17:30.10:0,30,724	1/1:18,0:17:11.99:314,12,0	0/0:12,0:12:8.52:0,9,204	0/0:19,0:19:6.02:0,6,164	0/0:8,0:8:5.98:0,6,137	0/0:41,0:40:12.04:0,12,273	0/0:14,0:13:21.07:0,21,889	0/0:7,0:6:3.01:0,3,192	0/0:30,0:30:45.15:0,45,2191	0/0:8,0:7:9.03:0,9,177	0/0:17,0:17:24.07:0,24,648	0/0:6,0:7:15.05:0,15,429	0/0:2,0:2:3.01:0,3,110
chr10	67282091	.	GTTCCA	G	854.87	PASS	AB=0.977;AC=18;AF=0.321;AN=56;BaseQRankSum=8.937;DP=579;FS=0.000;HRun=0;HaplotypeScore=149.3098;InbreedingCoeff=-0.2810;MQ=62.80;MQ0=28;MQRankSum=-6.696;QD=4.23;ReadPosRankSum=-4.130;VQSLOD=0.3544;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:48:80.37:0,80,2857	0/1:8,0:7:0.23:0,0,262	0/0:94,0:25:60.05:0,60,1432	0/0:93,0:33:61.70:0,62,1658	0/1:17,0:17:1.28:1,0,738	0/1:6,3:9:6.61:198,0,7	0/1:18,0:18:99:125,0,358	0/0:21,0:19:51.65:0,52,1529	0/1:13,0:13:49.39:106,0,49	0/1:14,0:13:16.79:17,0,210	0/1:7,0:7:88.15:111,0,88	0/1:16,0:16:99:103,0,139	0/0:14,0:14:36.12:0,36,908	0/1:15,0:15:74.23:129,0,74	0/1:11,0:11:48.79:49,0,51	0/1:14,0:14:39.68:40,0,215	0/0:31,0:30:57.32:0,57,2028	0/1:11,0:11:0.83:1,0,129	0/0:6,0:6:5.44:0,5,168	0/1:7,1:8:10.25:10,0,142	0/1:30,0:29:7.22:7,0,296	0/0:13,0:13:36.12:0,36,935	0/0:15,0:13:36.12:0,36,900	0/0:28,0:28:66.23:0,66,1990	0/1:3,0:3:20.55:21,0,69	0/0:13,0:12:4.05:0,4,236	0/1:6,0:6:50.60:51,0,67	1/1:2,0:2:3.01:36,3,0
chr10	67282096	.	A	AGTGTG	11137.40	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-5.229;DP=638;FS=18.399;HRun=0;HaplotypeScore=133.0910;InbreedingCoeff=0.9476;MQ=65.69;MQ0=24;MQRankSum=-6.148;QD=46.60;ReadPosRankSum=-1.115;VQSLOD=3.7082;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:50:99:0,106,1954	0/0:8,0:7:12.03:0,12,195	0/0:105,0:34:66.12:0,66,1005	0/0:99,0:37:3.77:0,4,830	0/0:14,0:14:30.09:0,30,566	1/1:7,3:10:24.08:624,24,0	1/1:12,11:25:38.96:1124,39,0	0/0:21,0:20:30.10:0,30,563	1/1:3,10:14:26.40:778,26,0	1/1:2,13:16:36:935,36,0	1/1:4,5:9:12.04:345,12,0	1/1:7,9:18:33.11:943,33,0	0/0:16,0:16:33.09:0,33,580	1/1:5,11:17:30.10:858,30,0	1/1:3,9:15:21.02:557,21,0	1/1:8,7:17:20.74:574,21,0	0/0:29,0:28:59.83:0,60,1090	1/1:4,9:13:36.12:979,36,0	1/1:6,3:8:15.05:406,15,0	1/1:3,5:8:18.06:519,18,0	1/1:21,13:34:19.63:599,20,0	0/0:15,0:15:30.09:0,30,536	0/0:14,0:13:30.10:0,30,549	0/0:26,0:26:54.18:0,54,1007	1/1:2,4:6:9.03:260,9,0	1/1:5,9:14:33.11:924,33,0	1/1:3,5:9:15.01:366,15,0	1/1:2,2:4:12.04:346,12,0
chr10	67282957	.	TTTTG	T	12932.01	PASS	AB=0.524;AC=33;AF=0.589;AN=56;BaseQRankSum=13.950;DP=665;FS=1.926;HRun=0;HaplotypeScore=123.6006;InbreedingCoeff=0.9256;MQ=63.72;MQ0=3;MQRankSum=-2.391;QD=34.76;ReadPosRankSum=4.030;VQSLOD=5.2355;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:87.27:0,87,2045	0/0:12,0:12:33.11:0,33,798	0/0:37,0:26:21.92:0,22,799	0/0:34,0:27:45.15:0,45,982	0/0:35,0:35:87.30:0,87,2147	1/1:5,16:21:42.14:712,42,0	1/1:4,12:16:27.09:458,27,0	0/0:26,0:26:57.18:0,57,997	1/1:5,14:19:36.12:610,36,0	1/1:5,29:34:84.29:1423,84,0	1/1:4,17:21:45.11:732,45,0	1/1:4,18:22:45.15:763,45,0	0/0:26,0:26:69.24:0,69,1712	1/1:1,24:25:54.18:916,54,0	1/1:4,17:21:36.12:611,36,0	1/1:4,26:30:69.24:1170,69,0	0/0:23,0:23:54.19:0,54,1336	0/1:2,20:22:11.90:716,0,12	1/1:8,20:26:60.16:927,60,0	1/1:6,12:18:33.11:559,33,0	1/1:4,13:17:36.12:611,36,0	0/0:21,0:21:54.17:0,54,1273	0/0:26,0:26:66.23:0,66,1612	0/0:18,0:18:39.13:0,39,974	1/1:5,15:20:45.15:754,45,0	1/1:9,25:34:71.25:1154,71,0	1/1:3,14:17:35.95:611,36,0	1/1:0,7:7:12.04:204,12,0
chr10	67283466	.	T	TG	2775.32	PASS	AB=0.824;AC=36;AF=0.643;AN=56;BaseQRankSum=0.025;DP=335;FS=11.660;HRun=8;HaplotypeScore=59.2938;InbreedingCoeff=0.7859;MQ=74.05;MQ0=0;MQRankSum=-1.266;QD=14.09;ReadPosRankSum=-3.754;VQSLOD=1.3508;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:47.51:0,48,650	0/0:9,0:9:23.97:0,24,210	0/1:12,0:12:0.86:1,0,22	0/0:4,0:2:2.68:0,3,11	0/0:18,0:18:40.91:0,41,181	1/1:1,6:7:18.05:208,18,0	1/1:2,7:9:15:158,15,0	1/1:6,0:7:5.68:29,6,0	1/1:4,10:14:12.04:138,12,0	1/1:1,8:9:21.02:219,21,0	1/1:4,6:10:12.03:137,12,0	1/1:3,10:13:19.57:197,20,0	0/0:12,0:12:26.97:0,27,239	1/1:0,9:9:9.03:104,9,0	1/1:5,12:18:12.49:134,12,0	1/1:3,7:10:17.83:192,18,0	0/0:17,0:17:32.95:0,33,290	1/1:5,0:5:5.99:56,6,0	1/1:3,8:11:25.32:278,25,0	1/1:1,8:10:20.89:215,21,0	0/1:5,6:11:12.41:123,0,12	0/0:20,0:20:51.02:0,51,466	0/0:12,0:12:33.02:0,33,302	0/0:10,0:10:15.07:0,15,159	1/1:0,5:5:12.04:138,12,0	1/1:5,11:16:33.07:368,33,0	1/1:3,9:13:14.54:147,15,0	1/1:0,8:8:12.04:138,12,0
chr10	67283811	.	GCCC	G	8738.85	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=18.314;DP=530;FS=9.907;HRun=4;HaplotypeScore=182.1261;InbreedingCoeff=0.9658;MQ=77.42;MQ0=0;MQRankSum=-16.449;QD=32.73;ReadPosRankSum=2.588;VQSLOD=2.0744;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,138,3259	0/0:1,0:1:3.01:0,3,71	0/0:17,0:17:34.48:0,34,986	0/0:17,0:17:40.65:0,41,883	0/0:19,0:19:48.16:0,48,1129	1/1:2,11:13:36.09:438,36,0	1/1:6,15:21:48.10:560,48,0	0/0:29,0:29:87.29:0,87,2016	1/1:1,19:20:60.18:740,60,0	1/1:5,11:16:39.09:518,39,0	1/1:0,13:13:36.10:436,36,0	1/1:3,14:17:48.04:582,48,0	0/0:27,0:27:78.27:0,78,1845	1/1:3,23:26:72.59:899,73,0	1/1:2,15:17:48.15:626,48,0	1/1:3,20:23:66.12:824,66,0	0/0:38,0:38:99:0,114,2677	1/1:3,13:16:39.13:512,39,0	1/1:8,13:21:45.13:609,45,0	1/1:4,9:13:32.49:372,32,0	1/1:3,6:9:15.03:167,15,0	0/0:21,0:21:57.18:0,57,1301	0/0:21,0:21:57.15:0,57,1294	0/0:27,0:27:81.28:0,81,1917	1/1:1,5:6:12.04:155,12,0	1/1:0,11:11:33.11:430,33,0	1/1:2,17:19:54.15:674,54,0	1/1:1,5:6:15.05:197,15,0
chr10	67283816	.	ATGGG	A	10037.43	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=18.772;DP=500;FS=15.407;HRun=0;HaplotypeScore=181.0832;InbreedingCoeff=0.9561;MQ=80.94;MQ0=0;MQRankSum=-17.018;QD=43.64;ReadPosRankSum=3.648;VQSLOD=4.5054;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,141,3888	0/0:1,0:1:3.01:0,3,84	0/0:19,0:19:43.39:0,43,1410	0/0:17,0:17:8.37:0,8,945	0/0:20,0:20:48.16:0,48,1343	1/1:0,11:11:33.11:493,33,0	1/1:1,15:16:45.08:617,45,0	0/0:32,0:32:93.31:0,93,2493	1/1:0,19:19:57.19:848,57,0	1/1:1,11:12:36.12:576,36,0	1/1:0,13:13:36.12:521,36,0	1/1:1,14:15:45.13:661,45,0	0/0:26,0:26:75.26:0,75,2087	1/1:2,23:25:73.78:1063,74,0	1/1:1,15:16:48.16:733,48,0	1/1:1,20:21:63.20:922,63,0	0/0:39,0:39:99:0,114,3184	1/1:0,13:13:39.13:603,39,0	1/1:1,13:14:42.14:676,42,0	1/1:1,9:10:30.07:432,30,0	1/1:0,6:6:15.05:202,15,0	0/0:20,0:20:57.20:0,57,1574	0/0:19,0:19:54.17:0,54,1444	0/0:29,0:29:87.30:0,87,2421	1/1:1,5:6:12.04:183,12,0	1/1:0,11:11:33.11:507,33,0	1/1:0,17:17:51.17:768,51,0	1/1:0,5:5:15.05:232,15,0
chr10	67283853	.	G	GA	11870.18	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=18.362;DP=550;FS=0.000;HRun=1;HaplotypeScore=168.2148;InbreedingCoeff=0.9901;MQ=81.93;MQ0=0;MQRankSum=-13.287;QD=39.44;ReadPosRankSum=2.088;VQSLOD=4.3734;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,117,1501	0/0:3,0:3:9.02:0,9,103	0/0:24,0:24:69.17:0,69,831	0/0:24,0:24:65:0,65,796	0/0:19,0:19:48.14:0,48,602	1/1:2,14:16:39.13:582,39,0	1/1:2,23:25:33.29:993,33,0	0/0:28,0:28:78.22:0,78,972	1/1:4,15:19:45.15:673,45,0	1/1:0,17:18:51.17:754,51,0	1/1:3,14:17:36.12:520,36,0	1/1:1,20:21:54.18:806,54,0	0/0:19,0:19:57.17:0,57,724	1/1:1,23:24:69.23:1026,69,0	1/1:2,18:20:51.17:757,51,0	1/1:1,22:23:63.21:918,63,0	0/0:35,0:35:99:0,102,1294	1/1:0,22:22:66.15:952,66,0	1/1:4,16:20:54.06:719,54,0	1/1:1,9:10:27.01:355,27,0	1/1:1,15:16:42.14:629,42,0	0/0:17,0:17:48.14:0,48,602	0/0:13,0:13:36.08:0,36,435	0/0:26,0:26:78.25:0,78,1011	1/1:0,9:9:27.09:404,27,0	1/1:1,18:19:57.15:822,57,0	1/1:1,15:15:48.16:691,48,0	1/1:0,6:6:18.06:269,18,0
chr10	67284024	.	GGTGAGGGAGTCC	G	1021.03	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.032;DP=578;FS=16.788;HRun=0;HaplotypeScore=195.2484;InbreedingCoeff=0.9928;MQ=84.05;MQ0=0;MQRankSum=-3.601;QD=92.82;ReadPosRankSum=-1.473;VQSLOD=1.9889;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,111,5814	0/0:7,0:7:21.07:0,21,1312	0/0:21,0:21:63.20:0,63,2951	0/0:23,0:23:62.55:0,63,3046	0/0:25,0:25:71.73:0,72,4024	0/0:14,0:14:42.14:0,42,2522	0/0:22,0:22:66.23:0,66,3856	1/1:0,11:11:30.10:1115,30,0	0/0:17,0:17:51.18:0,51,3133	0/0:16,0:16:48.12:0,48,2643	0/0:13,0:13:36.12:0,36,2232	0/0:23,0:23:63.22:0,63,3759	0/0:23,0:23:69.24:0,69,4094	0/0:17,0:17:51.18:0,51,3184	0/0:24,0:24:72.25:0,72,4550	0/0:20,0:20:60.17:0,60,3548	0/0:39,0:39:99:0,117,6137	0/0:19,0:19:51.18:0,51,2944	0/0:20,0:20:60.21:0,60,3577	0/0:18,0:18:51.18:0,51,2866	0/0:55,0:55:99:0,163,9862	0/0:10,0:10:30.09:0,30,1698	0/0:18,0:18:51.18:0,51,3143	0/0:27,0:27:81.26:0,81,4585	0/0:15,0:15:45.15:0,45,2705	0/0:15,0:15:45.15:0,45,2727	0/0:21,0:21:60.21:0,60,3483	0/0:8,0:8:24.08:0,24,1527
chr10	67284170	.	A	AG	13980.41	PASS	AB=1.000;AC=54;AF=0.964;AN=56;BaseQRankSum=-1.168;DP=573;FS=8.183;HRun=3;HaplotypeScore=210.3927;InbreedingCoeff=0.2152;MQ=71.33;MQ0=2;MQRankSum=-1.561;QD=24.40;ReadPosRankSum=0.797;VQSLOD=3.1144;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,0:29:79.93:765,80,0	1/1:3,0:8:18.01:190,18,0	0/1:26,0:19:3.93:4,0,138	0/1:26,0:20:40.08:75,0,40	1/1:7,13:20:53.43:626,53,0	1/1:15,11:26:62.99:677,63,0	1/1:6,11:18:41.68:487,42,0	1/1:12,0:12:20.99:204,21,0	1/1:3,15:18:48.13:630,48,0	1/1:5,14:19:54.83:670,55,0	1/1:9,9:18:36:516,36,0	1/1:10,9:19:50.61:549,51,0	1/1:30,1:31:28.11:243,28,0	1/1:4,18:22:57.03:687,57,0	1/1:5,18:23:62.85:807,63,0	1/1:7,15:22:56.97:691,57,0	1/1:6,0:18:53.98:579,54,0	1/1:4,6:10:21.96:291,22,0	1/1:8,9:17:31.59:442,32,0	1/1:6,16:22:61.62:757,62,0	1/1:7,13:20:45.08:552,45,0	1/1:17,1:18:32.95:241,33,0	1/1:17,0:17:34.04:186,34,0	1/1:15,1:16:24.26:175,24,0	1/1:4,15:19:45.07:566,45,0	1/1:16,13:29:66.03:746,66,0	1/1:10,28:38:99:1305,105,0	1/1:6,5:11:32.45:317,32,0
chr10	67284173	.	G	GGA	10232.48	PASS	AB=1.000;AC=53;AF=0.946;AN=56;BaseQRankSum=1.155;DP=578;FS=5.261;HRun=0;HaplotypeScore=231.2918;InbreedingCoeff=0.4453;MQ=71.04;MQ0=2;MQRankSum=-1.521;QD=18.60;ReadPosRankSum=4.944;VQSLOD=4.6220;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:32,0:32:69.39:614,69,0	1/1:7,0:7:14.97:137,15,0	0/0:25,0:19:5.81:0,6,206	0/1:26,0:20:53.97:54,0,102	1/1:20,1:21:41.13:492,41,0	1/1:25,0:25:49.94:497,50,0	1/1:17,0:17:21.28:338,21,0	1/1:14,0:17:42.29:409,42,0	1/1:19,0:19:37.79:412,38,0	1/1:20,0:21:56.64:499,57,0	1/1:16,2:18:35.76:485,36,0	1/1:18,0:19:33.40:379,33,0	1/1:31,0:31:0.99:156,1,0	1/1:23,1:24:31.09:453,31,0	1/1:23,0:23:40.91:500,41,0	1/1:20,0:20:56.71:483,57,0	1/1:18,0:18:51.54:387,52,0	1/1:9,1:10:20.82:172,21,0	1/1:16,0:16:30.50:313,31,0	1/1:22,0:22:61.07:501,61,0	1/1:20,1:21:44.91:411,45,0	1/1:18,0:18:21.92:189,22,0	1/1:16,0:16:27.01:138,27,0	1/1:15,0:15:16.94:119,17,0	1/1:19,1:20:36.78:405,37,0	1/1:24,1:25:54.69:577,55,0	1/1:38,0:38:88.66:876,89,0	1/1:11,0:11:31.85:231,32,0
chr10	67284184	.	AC	A	4367.37	PASS	AB=0.876;AC=53;AF=0.946;AN=56;BaseQRankSum=-1.039;DP=551;FS=31.684;HRun=2;HaplotypeScore=212.3169;InbreedingCoeff=-0.0680;MQ=70.61;MQ0=2;MQRankSum=1.327;QD=7.93;ReadPosRankSum=1.641;VQSLOD=0.0225;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:16,17:33:78.93:633,79,0	1/1:1,4:5:14.96:135,15,0	0/1:21,4:17:68.87:69,0,143	0/1:17,5:18:73.68:74,0,129	1/1:22,0:23:40.99:203,41,0	1/1:22,0:22:29.31:176,29,0	1/1:18,1:19:30.26:150,30,0	1/1:21,0:21:29.24:222,29,0	1/1:19,0:19:28.82:128,29,0	1/1:22,0:22:40.13:174,40,0	1/1:13,2:15:25.48:184,25,0	1/1:18,0:18:15.37:99,15,0	0/1:29,1:30:4.88:114,0,5	1/1:26,0:26:18.71:175,19,0	1/1:22,0:22:35.83:123,36,0	1/1:16,0:16:20.72:69,21,0	1/1:4,12:16:41.58:304,42,0	1/1:10,0:10:1.60:33,2,0	1/1:17,0:17:21.11:117,21,0	1/1:18,0:18:19.88:85,20,0	1/1:20,0:20:38.52:226,39,0	1/1:17,0:17:14.61:153,15,0	1/1:18,0:18:30.24:173,30,0	1/1:13,1:14:6.52:77,7,0	1/1:19,0:19:20.65:77,21,0	1/1:23,0:23:40.37:229,40,0	1/1:33,0:33:29.96:130,30,0	1/1:6,0:6:10.70:38,11,0
chr10	67284612	.	A	AG	13388.46	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-3.521;DP=662;FS=1.666;HRun=3;HaplotypeScore=105.2227;InbreedingCoeff=0.9948;MQ=75.69;MQ0=1;MQRankSum=-4.164;QD=36.78;ReadPosRankSum=3.855;VQSLOD=4.5997;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,120,1411	0/0:15,0:15:42.13:0,42,502	0/0:24,0:23:62.79:0,63,651	0/0:35,0:34:11.34:0,11,747	0/0:20,0:20:57.01:0,57,632	1/1:2,12:14:36.10:484,36,0	1/1:1,19:20:57.12:773,57,0	0/0:36,0:36:96.25:0,96,1102	1/1:2,23:25:69.16:932,69,0	1/1:3,19:22:60.20:839,60,0	1/1:0,20:20:57.19:797,57,0	1/1:5,25:29:75.25:1046,75,0	0/0:29,0:29:87.26:0,87,1033	1/1:4,21:25:69.12:898,69,0	1/1:3,24:26:75.25:1047,75,0	1/1:7,21:28:72.08:936,72,0	0/0:32,0:32:90.26:0,90,1067	1/1:1,29:30:84.18:1129,84,0	1/1:4,19:23:63.15:843,63,0	1/1:4,18:22:57.10:763,57,0	1/1:4,14:18:42.09:564,42,0	0/0:23,0:23:66.19:0,66,780	0/0:23,0:23:69.17:0,69,811	0/0:18,0:18:45.13:0,45,529	1/1:2,15:17:45.14:608,45,0	1/1:0,19:19:57.19:796,57,0	1/1:3,11:14:39.04:514,39,0	1/1:0,10:10:30.10:419,30,0
chr10	67284671	.	A	ACTGGT	31885.14	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=8.335;DP=688;FS=2.115;HRun=0;HaplotypeScore=161.8441;InbreedingCoeff=0.9912;MQ=77.34;MQ0=0;MQRankSum=-19.685;QD=74.50;ReadPosRankSum=-0.209;VQSLOD=5.7322;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,117,2316	0/0:16,0:16:45.15:0,45,959	0/0:33,0:33:90.27:0,90,1751	0/0:22,0:22:57.17:0,57,1096	1/1:4,16:21:42.14:1294,42,0	1/1:6,10:16:48.12:1353,48,0	1/1:5,32:40:99:2988,99,0	0/0:32,0:32:81.27:0,81,1681	1/1:6,26:32:93.26:2683,93,0	1/1:7,15:22:60.17:1693,60,0	1/1:6,9:15:30.10:857,30,0	1/1:6,30:37:99:3105,105,0	0/0:29,0:29:87.30:0,87,1849	1/1:1,17:19:54.17:1617,54,0	1/1:7,23:31:75.21:2171,75,0	1/1:4,29:33:90.27:2717,90,0	0/0:28,0:28:84.29:0,84,1790	1/1:9,10:19:42.11:1191,42,0	1/1:9,17:27:69.24:2093,69,0	1/1:8,16:26:57.15:1580,57,0	1/1:9,10:19:42.14:1311,42,0	0/0:15,0:15:42.14:0,42,882	0/0:23,0:23:63.22:0,63,1332	0/0:21,0:21:57.20:0,57,1210	1/1:6,21:27:69.24:2059,69,0	1/1:10,13:26:69.20:1862,69,0	1/1:0,12:12:33.11:1030,33,0	1/1:1,3:4:9.03:281,9,0
chr10	67286067	.	GA	G	410.13	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.240;DP=616;FS=0.000;HRun=10;HaplotypeScore=73.3047;InbreedingCoeff=0.9414;MQ=69.12;MQ0=0;MQRankSum=-0.787;QD=14.65;ReadPosRankSum=-2.599;VQSLOD=3.2607;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:31:93.04:0,93,996	0/0:8,0:8:24.06:0,24,265	0/0:15,0:14:31.59:0,32,295	0/0:6,0:6:9.02:0,9,93	0/0:23,0:23:54.14:0,54,590	0/0:25,1:26:37.10:0,37,623	0/0:17,0:17:38:0,38,416	1/1:7,21:28:32.76:505,33,0	0/0:24,0:24:69.19:0,69,763	0/0:31,0:31:69.15:0,69,734	0/0:19,1:20:28.08:0,28,524	0/0:18,0:18:48.13:0,48,531	0/0:20,0:20:57.11:0,57,617	0/0:14,0:14:36.10:0,36,398	0/0:32,0:32:84.21:0,84,914	0/0:25,0:25:66.18:0,66,730	0/0:18,0:18:51.14:0,51,564	0/0:24,0:24:60.15:0,60,655	0/0:16,0:17:31.64:0,32,336	0/0:26,0:28:81.02:0,81,864	0/0:19,0:19:54.15:0,54,597	0/0:32,0:32:90.08:0,90,961	0/0:25,0:25:72.11:0,72,753	0/0:22,0:22:57.14:0,57,623	0/0:19,0:19:57.13:0,57,615	0/0:25,0:25:57.15:0,57,631	0/0:33,0:33:79.44:0,79,856	0/0:16,0:16:47.98:0,48,503
chr10	67286163	.	A	AC	4970.98	PASS	AB=1.000;AC=12;AF=0.214;AN=56;BaseQRankSum=13.789;DP=679;FS=7.330;HRun=3;HaplotypeScore=94.4017;InbreedingCoeff=0.8536;MQ=78.84;MQ0=0;MQRankSum=-1.748;QD=25.49;ReadPosRankSum=0.687;VQSLOD=3.5068;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,44:46:99:1447,105,0	1/1:0,15:15:36.12:504,36,0	0/0:17,0:17:48.13:0,48,562	0/0:17,0:17:38.09:0,38,416	1/1:4,20:24:54.14:733,54,0	0/1:24,0:24:2.72:3,0,550	0/0:21,0:21:60.17:0,60,706	1/1:7,31:37:96.31:1315,96,0	0/0:16,0:16:39.11:0,39,462	0/0:35,0:35:62.30:0,62,998	0/1:22,0:22:2.93:3,0,432	0/0:19,0:19:41.18:0,41,615	0/0:23,0:23:37.22:0,37,649	0/0:18,0:18:42.13:0,42,504	0/0:18,0:18:48.11:0,48,560	0/0:20,0:20:57.14:0,57,667	1/1:1,25:26:69.23:966,69,0	0/0:12,0:12:30.06:0,30,345	0/0:29,0:29:62.72:0,63,708	0/0:20,0:20:26.03:0,26,526	0/0:28,0:28:77.71:0,78,892	0/0:27,0:27:28.81:0,29,536	0/0:22,0:22:33.55:0,34,385	0/0:29,0:29:87.22:0,87,1027	0/0:29,0:29:78.19:0,78,903	0/0:27,1:28:27.20:0,27,747	0/0:39,0:39:99:0,102,1181	0/0:17,0:17:42.10:0,42,479
chr10	67286550	.	T	TC	5895.20	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=15.820;DP=740;FS=6.030;HRun=0;HaplotypeScore=89.7083;InbreedingCoeff=0.9981;MQ=86.64;MQ0=0;MQRankSum=-5.196;QD=38.78;ReadPosRankSum=-0.494;VQSLOD=4.7648;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,37:37:81.27:1218,81,0	1/1:0,14:14:42.14:633,42,0	0/0:28,0:28:81.24:0,81,1077	0/0:29,0:29:81.15:0,81,1055	1/1:0,30:30:87.29:1308,87,0	0/0:25,0:25:75.23:0,75,1016	0/0:29,0:29:87.27:0,87,1197	1/1:2,46:48:99:1922,135,0	0/0:23,0:23:66.21:0,66,907	0/0:35,0:35:99:0,99,1345	0/0:21,0:21:60.20:0,60,837	0/0:23,0:23:66.20:0,66,890	0/0:23,0:23:69.21:0,69,932	0/0:15,0:15:45.15:0,45,629	0/0:19,0:19:57.19:0,57,797	0/0:31,0:31:90.28:0,90,1213	1/1:1,22:23:18.25:815,18,0	0/0:23,0:23:69.20:0,69,928	0/0:21,0:21:63.21:0,63,867	0/0:21,0:21:60.20:0,60,838	0/0:32,0:32:93.28:0,93,1252	0/0:25,0:25:75.25:0,75,1048	0/0:24,0:24:69.23:0,69,962	0/0:20,0:20:57.19:0,57,795	0/0:35,0:35:99:0,102,1377	0/0:36,0:36:99:0,102,1397	0/0:39,0:39:99:0,117,1598	0/0:11,0:11:33.11:0,33,461
chr10	67286639	.	ACGAGGG	A	5473.92	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=14.088;DP=671;FS=7.417;HRun=0;HaplotypeScore=164.4483;InbreedingCoeff=0.9957;MQ=87.84;MQ0=0;MQRankSum=-13.142;QD=48.02;ReadPosRankSum=-2.283;VQSLOD=4.1014;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,28:34:72.25:1730,72,0	1/1:1,5:6:15.05:360,15,0	0/0:35,0:35:99:0,101,3211	0/0:16,0:16:45.15:0,45,1594	1/1:1,28:29:50.72:1223,51,0	0/0:22,0:22:66.23:0,66,2418	0/0:30,0:30:90.31:0,90,3223	1/1:6,24:30:72.19:1584,72,0	0/0:20,0:20:60.21:0,60,2196	0/0:32,0:32:96.33:0,96,3455	0/0:16,0:16:48.12:0,48,1615	0/0:24,0:24:72.25:0,72,2576	0/0:23,0:23:69.24:0,69,2434	0/0:20,0:20:57.16:0,57,1916	0/0:34,0:34:99:0,99,3554	0/0:28,0:28:84.29:0,84,3010	1/1:4,11:15:24.52:577,25,0	0/0:20,0:20:60.18:0,60,2108	0/0:19,0:19:51.17:0,51,1825	0/0:26,0:26:78.22:0,78,2758	0/0:24,0:24:65.78:0,66,2338	0/0:23,0:23:69.24:0,69,2497	0/0:26,0:26:78.25:0,78,2695	0/0:30,0:30:90.31:0,90,3251	0/0:16,0:16:45.15:0,45,1629	0/0:35,0:35:99:0,99,3532	0/0:28,0:28:84.29:0,84,2980	0/0:10,0:10:30.10:0,30,1098
chr10	67287430	.	CG	C	1147.62	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.133;DP=699;FS=5.425;HRun=2;HaplotypeScore=85.3164;InbreedingCoeff=0.9807;MQ=93.67;MQ0=0;MQRankSum=-1.788;QD=34.78;ReadPosRankSum=-4.369;VQSLOD=1.9828;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,108,1593	0/0:5,0:5:15.01:0,15,200	0/0:36,0:36:93.30:0,93,1323	0/0:32,0:31:81.71:0,82,1179	0/0:22,0:22:47.92:0,48,675	0/0:20,0:20:60.16:0,60,874	0/0:24,0:24:72.23:0,72,1056	1/1:1,32:33:96.31:1242,96,0	0/0:26,0:26:75.25:0,75,1102	0/0:21,0:21:63.21:0,63,942	0/0:20,0:20:54.17:0,54,788	0/0:25,0:25:75.21:0,75,1098	0/0:30,0:30:87.28:0,87,1265	0/0:20,1:21:21.42:0,21,794	0/0:39,0:39:99:0,114,1703	0/0:23,0:23:66.20:0,66,949	0/0:28,0:28:84.24:0,84,1232	0/0:22,0:22:60.20:0,60,899	0/0:17,0:17:51.17:0,51,764	0/0:23,0:23:66.22:0,66,986	0/0:42,0:42:99:0,123,1838	0/0:21,0:21:63.21:0,63,929	0/0:16,0:16:48.15:0,48,699	0/0:23,0:23:69.15:0,69,982	0/0:24,0:24:72.23:0,72,1043	0/0:30,0:30:84.28:0,84,1257	0/0:27,0:27:81.26:0,81,1185	0/0:13,0:13:39.13:0,39,584
chr10	67287645	.	A	AC	5090.66	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=4.080;DP=603;FS=2.268;HRun=1;HaplotypeScore=63.6753;InbreedingCoeff=0.9924;MQ=84.51;MQ0=0;MQRankSum=-0.900;QD=43.14;ReadPosRankSum=2.052;VQSLOD=5.1935;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,31:31:72.25:1151,72,0	1/1:0,9:9:24.08:383,24,0	0/0:19,0:19:51.13:0,51,667	0/0:20,0:20:57.19:0,57,793	1/1:0,22:22:66.23:1055,66,0	0/0:32,0:32:87.27:0,87,1196	0/0:27,0:27:78.26:0,78,1084	1/1:1,26:27:81.26:1255,81,0	0/0:26,0:26:75.25:0,75,1046	0/0:19,0:19:57.18:0,57,778	0/0:19,0:19:57.19:0,57,795	0/0:16,0:16:42.14:0,42,587	0/0:24,0:24:72.24:0,72,1004	0/0:22,0:22:66.21:0,66,903	0/0:27,0:27:72.21:0,72,970	0/0:21,0:21:60.17:0,60,801	1/1:1,28:29:78.27:1246,78,0	0/0:17,0:17:51.17:0,51,712	0/0:25,0:25:72.24:0,72,1004	0/0:27,0:27:81.27:0,81,1132	0/0:20,0:20:54.18:0,54,755	0/0:24,0:24:69.22:0,69,948	0/0:17,0:17:51.15:0,51,693	0/0:17,0:17:48.16:0,48,669	0/0:15,0:15:39.11:0,39,526	0/0:23,0:22:69.22:0,69,946	0/0:24,0:24:69.23:0,69,961	0/0:4,0:4:12.04:0,12,168
chr10	67287820	.	CT	C	1362	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=8.044;DP=459;FS=5.658;HRun=1;HaplotypeScore=78.1892;InbreedingCoeff=0.8903;MQ=73.99;MQ0=1;MQRankSum=-5.371;QD=13.22;ReadPosRankSum=-0.457;VQSLOD=2.2715;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:23,6:29:65.02:442,65,0	1/1:5,8:13:35.46:241,35,0	0/0:29,0:25:65.34:0,65,915	0/0:31,0:29:80.61:0,81,954	1/1:8,0:8:12.35:83,12,0	0/0:9,0:9:14.79:0,15,175	0/0:16,0:16:22.82:0,23,161	1/1:34,1:35:92.75:496,93,0	0/0:12,0:12:20.20:0,20,182	0/0:15,0:15:35.03:0,35,350	0/0:9,0:9:11.51:0,12,115	0/0:11,0:11:14.37:0,14,94	0/0:16,0:16:45:0,45,620	0/0:15,0:15:31.19:0,31,304	0/0:17,0:17:4.26:0,4,281	0/0:14,0:14:8.12:0,8,71	1/1:13,5:17:42.95:272,43,0	0/0:12,0:12:29.60:0,30,273	0/0:11,1:12:7.18:0,7,189	0/0:10,0:10:26.03:0,26,222	0/0:17,0:17:12:0,12,118	0/0:21,0:21:52.36:0,52,691	0/0:20,0:20:54.17:0,54,746	0/0:25,1:26:74.41:0,74,972	0/0:13,0:13:17.72:0,18,142	0/0:12,0:12:24.89:0,25,226	0/0:15,0:14:30.78:0,31,317	0/0:4,0:4:9.34:0,9,56
chr10	67287821	.	T	TCCCC	4144.43	PASS	AB=1.000;AC=39;AF=0.696;AN=56;BaseQRankSum=-0.307;DP=469;FS=4.387;HRun=8;HaplotypeScore=107.7393;InbreedingCoeff=0.6021;MQ=70.11;MQ0=1;MQRankSum=-5.888;QD=14.10;ReadPosRankSum=-2.624;VQSLOD=-0.3196;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:29:59.61:254,0,60	0/1:12,0:12:5.17:251,0,5	0/0:26,0:22:51.04:0,51,733	0/0:31,0:29:71.82:0,72,961	1/1:8,0:8:9.02:127,9,0	1/1:9,0:9:6.89:76,7,0	1/1:12,0:19:15.01:278,15,0	0/0:35,0:35:26.80:0,27,732	1/1:14,0:13:12.04:191,12,0	1/1:9,0:15:8.66:109,9,0	1/1:8,0:8:8.91:116,9,0	1/1:5,8:13:6.02:74,6,0	0/0:16,0:16:42.13:0,42,634	1/1:15,0:15:32.62:534,33,0	1/1:17,0:18:36.09:598,36,0	1/1:2,11:14:8.84:149,9,0	0/1:18,0:17:48.20:140,0,48	1/1:12,0:12:21:278,21,0	1/1:10,0:12:8.99:77,9,0	1/1:12,0:12:6.01:64,6,0	1/1:10,0:18:2.98:37,3,0	0/0:20,0:21:51.09:0,51,726	0/0:20,0:20:53.85:0,54,795	0/0:26,0:26:60.14:0,60,901	1/1:6,6:13:6.02:130,6,0	1/1:12,0:13:3:27,3,0	1/1:17,0:16:27.08:484,27,0	1/1:4,0:5:8.95:150,9,0
chr10	67287826	.	C	CACACA	1213.37	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=3.984;DP=450;FS=0.748;HRun=0;HaplotypeScore=135.4607;InbreedingCoeff=0.8119;MQ=69.03;MQ0=1;MQRankSum=-5.561;QD=21.67;ReadPosRankSum=2.602;VQSLOD=3.3511;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:22,6:28:27.60:459,28,0	1/1:2,8:10:26.12:553,26,0	0/0:28,0:24:64.56:0,65,1364	0/0:30,0:28:79.82:0,80,1681	0/0:5,0:5:8.92:0,9,87	0/0:6,0:6:9.50:0,9,131	0/0:21,0:21:24.39:0,24,291	0/0:34,0:34:93.71:0,94,1739	0/0:12,0:11:12.81:0,13,113	0/0:16,0:16:26.64:0,27,347	0/0:10,0:10:12.33:0,12,137	0/0:11,0:11:14.89:0,15,113	0/0:16,0:16:45.01:0,45,1005	0/0:17,0:17:34.39:0,34,387	0/0:16,0:16:35.43:0,35,384	0/0:15,0:15:11.92:0,12,106	1/1:13,5:18:6.53:335,7,0	0/0:10,0:10:27.03:0,27,301	0/0:10,0:10:15.02:0,15,179	0/0:9,0:9:12.01:0,12,127	0/0:16,0:16:6.47:0,6,75	0/0:21,0:21:63.19:0,63,1333	0/0:20,0:20:57.20:0,57,1318	0/0:26,0:26:75.20:0,75,1537	0/0:11,0:11:11.93:0,12,146	0/0:12,0:12:12.02:0,12,87	0/0:18,0:18:41.43:0,41,388	0/0:4,0:4:8.81:0,9,64
chr10	67287955	.	A	AT	5693.65	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=0.912;DP=664;FS=2.536;HRun=1;HaplotypeScore=69.7412;InbreedingCoeff=0.9757;MQ=77.68;MQ0=0;MQRankSum=-2.869;QD=39.54;ReadPosRankSum=-1.521;VQSLOD=4.8954;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,38:43:99:1582,114,0	1/1:0,9:9:27.09:403,27,0	0/0:25,0:25:72.18:0,72,884	0/0:25,0:25:67.60:0,68,857	1/1:0,23:23:63.21:942,63,0	0/0:21,0:21:57.16:0,57,712	0/0:28,0:28:84.25:0,84,1072	1/1:2,33:35:99:1403,99,0	0/0:19,0:19:57.19:0,57,739	0/0:36,0:36:99:0,108,1368	0/0:21,0:21:63.18:0,63,780	0/0:23,0:23:69.22:0,69,883	0/0:13,0:13:33.11:0,33,428	0/0:28,0:28:84.26:0,84,1065	0/0:24,0:24:69.22:0,69,895	0/0:17,0:17:51.15:0,51,647	1/1:4,30:34:93.29:1365,93,0	0/0:19,0:19:57.15:0,57,710	0/0:17,0:17:51.14:0,51,634	0/0:25,0:25:75.22:0,75,947	0/0:27,0:27:78.23:0,78,995	0/0:27,0:27:75.24:0,75,971	0/0:25,0:25:72.22:0,72,918	0/0:22,0:22:66.21:0,66,844	0/0:19,0:19:54.18:0,54,701	0/0:27,0:27:78.24:0,78,999	0/0:30,0:30:89.87:0,90,1126	0/0:2,0:2:6.01:0,6,65
chr10	67288026	.	CT	C	3736.13	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=9.580;DP=673;FS=2.729;HRun=5;HaplotypeScore=83.2607;InbreedingCoeff=0.9985;MQ=80.68;MQ0=1;MQRankSum=-1.174;QD=27.88;ReadPosRankSum=2.554;VQSLOD=3.9983;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,41:42:99:1173,105,0	1/1:1,7:8:24.06:264,24,0	0/0:52,0:46:99:0,110,1222	0/0:44,0:37:86.90:0,87,977	1/1:4,15:19:51.06:538,51,0	0/0:23,0:23:63.19:0,63,826	0/0:29,0:29:81.22:0,81,1039	1/1:4,22:25:63.12:677,63,0	0/0:19,0:18:48.07:0,48,628	0/0:26,0:26:72.22:0,72,939	0/0:13,0:13:36.09:0,36,456	0/0:28,0:28:81.21:0,81,1078	0/0:11,0:11:33.08:0,33,418	0/0:27,0:27:78.23:0,78,1012	0/0:24,0:24:66.21:0,66,882	0/0:24,0:24:66.19:0,66,865	1/1:5,34:39:96.27:1085,96,0	0/0:20,0:20:54.14:0,54,699	0/0:16,0:16:45.13:0,45,570	0/0:21,0:21:57.06:0,57,672	0/0:24,0:24:69.23:0,69,935	0/0:15,0:15:45.15:0,45,605	0/0:21,0:21:57.16:0,57,738	0/0:22,0:22:60.17:0,60,780	0/0:20,0:20:60.17:0,60,768	0/0:25,0:25:56.26:0,56,857	0/0:28,0:28:81.18:0,81,1033	0/0:7,0:7:21.07:0,21,285
chr10	67288479	.	CA	C	9377.62	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-5.159;DP=614;FS=18.270;HRun=9;HaplotypeScore=71.6733;InbreedingCoeff=0.9670;MQ=74.20;MQ0=0;MQRankSum=-0.898;QD=23.80;ReadPosRankSum=2.821;VQSLOD=3.8190;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:43.53:0,44,257	0/0:12,0:12:32.33:0,32,207	0/0:14,0:14:1.40:0,1,199	0/0:13,0:13:30.07:0,30,327	0/0:26,0:26:33.22:0,33,360	1/1:1,27:28:75.04:686,75,0	1/1:1,19:20:57.03:522,57,0	0/0:41,0:41:57.95:0,58,388	1/1:1,19:20:51.03:467,51,0	1/1:4,20:24:60.03:549,60,0	1/1:3,21:24:63.03:577,63,0	1/1:2,23:25:69.04:632,69,0	0/0:18,0:18:45.13:0,45,518	1/1:4,26:30:66.03:604,66,0	1/1:5,22:27:31.42:542,31,0	1/1:0,17:18:50.06:445,50,0	0/0:21,0:21:24.75:0,25,263	1/1:1,20:21:57.03:522,57,0	1/1:3,29:32:87.05:796,87,0	1/1:2,21:23:54.01:494,54,0	1/1:1,17:18:51.03:467,51,0	0/0:23,0:23:63.19:0,63,727	0/0:19,0:19:54.16:0,54,622	0/0:12,0:12:24.07:0,24,277	1/1:1,23:24:66.04:604,66,0	1/1:3,24:27:72:648,72,0	1/1:1,23:24:69.04:631,69,0	1/1:0,9:9:21.01:192,21,0
chr10	67288716	.	T	TG	6931.90	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=13.374;DP=807;FS=6.071;HRun=1;HaplotypeScore=93.1593;InbreedingCoeff=0.9232;MQ=74.30;MQ0=0;MQRankSum=-3.609;QD=37.67;ReadPosRankSum=-0.021;VQSLOD=4.8639;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,60:60:99:2491,169,0	1/1:0,8:8:21.07:314,21,0	0/0:31,0:30:90.27:0,90,1147	0/0:23,0:22:38.73:0,39,634	1/1:1,15:16:36.12:539,36,0	0/0:30,0:30:90.29:0,90,1169	0/0:27,0:27:78.25:0,78,1013	1/1:3,32:35:99:1517,105,0	0/0:32,0:32:93.28:0,93,1179	0/0:19,0:19:54.18:0,54,701	0/0:21,0:21:63.20:0,63,818	0/0:22,0:22:66.20:0,66,843	0/0:36,0:36:99:0,108,1386	0/0:40,0:40:99:0,117,1474	0/0:39,0:39:99:0,117,1519	0/0:34,0:34:99:0,99,1285	1/1:1,50:51:99:2068,138,0	0/0:24,0:24:72.23:0,72,934	0/0:22,0:22:66.16:0,66,825	0/0:17,0:17:51.14:0,51,632	0/0:56,0:56:99:0,166,2128	0/0:18,0:18:54.18:0,54,701	0/0:18,0:18:51.17:0,51,662	0/0:46,0:46:99:0,135,1752	0/1:14,0:14:2.19:2,0,428	0/0:31,0:31:87.23:0,87,1097	0/0:32,0:32:96.31:0,96,1244	0/0:5,0:5:15.05:0,15,195
chr10	67289464	.	TC	T	14633.48	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=5.049;DP=764;FS=20.504;HRun=5;HaplotypeScore=88.5291;InbreedingCoeff=0.9999;MQ=82.61;MQ0=0;MQRankSum=-2.536;QD=29.86;ReadPosRankSum=6.358;VQSLOD=3.0240;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,126,1663	0/0:11,0:11:33.10:0,33,431	0/0:20,0:20:60.14:0,60,772	0/0:26,0:26:68.86:0,69,840	0/0:32,0:32:78.24:0,78,1032	1/1:0,22:22:57.16:647,57,0	1/1:0,33:33:87.25:987,87,0	0/0:31,0:31:84.27:0,84,1134	1/1:0,26:26:66.19:749,66,0	1/1:1,30:31:84.24:953,84,0	1/1:2,18:20:54.15:612,54,0	1/1:1,30:31:87.04:966,87,0	0/0:31,0:31:90.20:0,90,1173	1/1:0,33:33:84.24:952,84,0	1/1:2,41:43:99:1259,111,0	1/1:1,37:38:96.27:1089,96,0	0/0:20,0:20:57.19:0,57,778	1/1:1,21:22:60.17:681,60,0	1/1:2,19:21:57.14:635,57,0	1/1:0,21:21:63.13:699,63,0	1/1:2,47:49:99:1429,126,0	0/0:20,0:20:57.19:0,57,780	0/0:16,0:16:42.14:0,42,574	0/0:23,0:23:66.22:0,66,901	1/1:0,18:18:39.11:442,39,0	1/1:0,48:48:99:1548,138,0	1/1:1,20:21:48.14:544,48,0	1/1:0,13:13:39.11:442,39,0
chr10	67289823	.	AAGAGT	A	5378.36	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=12.758;DP=668;FS=0.417;HRun=0;HaplotypeScore=122.7171;InbreedingCoeff=0.9976;MQ=87.64;MQ0=0;MQRankSum=-5.236;QD=45.20;ReadPosRankSum=0.622;VQSLOD=5.0572;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,37:37:75.26:1574,75,0	1/1:3,9:12:24.08:504,24,0	0/0:30,0:29:72.17:0,72,2029	0/0:20,0:20:54.16:0,54,1332	1/1:1,22:23:48.16:1006,48,0	0/0:24,0:24:66.23:0,66,1989	0/0:29,0:29:81.25:0,81,2292	1/1:1,23:24:69.19:1287,69,0	0/0:35,0:35:99:0,102,3097	0/0:25,0:25:69.23:0,69,2071	0/0:18,0:18:48.14:0,48,1305	0/0:39,0:39:99:0,108,3197	0/0:26,0:26:75.26:0,75,2303	0/0:17,0:17:45.15:0,45,1367	0/0:29,0:29:84.29:0,84,2604	0/0:22,0:22:63.22:0,63,1837	1/1:5,18:23:48.16:1007,48,0	0/0:27,0:27:66.23:0,66,2046	0/0:19,0:19:57.18:0,57,1657	0/0:21,0:21:60.21:0,60,1860	0/0:33,0:33:96.33:0,96,2937	0/0:15,0:15:42.14:0,42,1295	0/0:19,0:19:54.19:0,54,1673	0/0:27,0:27:75.26:0,75,2256	0/0:20,0:20:57.20:0,57,1764	0/0:23,0:23:66.21:0,66,1945	0/0:25,0:25:72.23:0,72,2147	0/0:6,0:6:18.06:0,18,558
chr10	67290105	.	G	GA	10094.08	PASS	AC=34;AF=0.654;AN=52;BaseQRankSum=2.067;DP=563;FS=12.535;HRun=9;HaplotypeScore=86.9911;InbreedingCoeff=0.9049;MQ=74.30;MQ0=2;MQRankSum=-1.877;QD=24.56;ReadPosRankSum=-0.228;VQSLOD=4.3102;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	0/0:1,0:1:0.47:0,0,1	0/0:37,0:25:44.07:0,44,388	0/0:19,0:13:21.97:0,22,156	0/0:1,0:1:1.25:0,1,3	1/1:3,21:24:48.13:531,48,0	1/1:4,20:24:60.03:643,60,0	./.	1/1:8,20:28:57.15:631,57,0	1/1:0,24:25:69.19:761,69,0	1/1:5,24:29:68.97:718,69,0	1/1:1,16:17:42.11:465,42,0	0/0:24,0:24:68.97:0,69,595	1/1:3,21:24:48.13:530,48,0	1/1:2,27:29:66.18:730,66,0	1/1:3,19:22:35.83:392,36,0	0/0:5,0:5:2.22:0,2,7	1/1:4,22:26:63.17:696,63,0	1/1:7,14:19:39.02:398,39,0	1/1:6,32:38:93.21:1007,93,0	1/1:2,27:29:60.16:664,60,0	0/0:17,0:17:41.97:0,42,360	0/0:20,0:20:50.97:0,51,439	0/0:28,0:28:77.89:0,78,663	1/1:4,15:19:36.10:398,36,0	1/1:1,25:26:75.20:826,75,0	1/1:5,20:25:28.10:538,28,0	1/1:0,5:5:15.04:166,15,0
chr10	67290858	.	CACCCAT	C	416.87	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.003;DP=522;FS=0.000;HRun=0;HaplotypeScore=122.9891;InbreedingCoeff=0.9369;MQ=55.29;MQ0=3;MQRankSum=-4.628;QD=27.79;ReadPosRankSum=-0.787;VQSLOD=3.0974;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:65.02:0,65,2164	0/0:9,0:9:27.08:0,27,848	0/0:23,0:12:33.07:0,33,728	0/0:16,0:11:29.96:0,30,666	1/1:0,15:14:24.08:510,24,0	0/0:21,0:21:48.16:0,48,1630	0/0:22,0:22:51.17:0,51,1693	0/0:23,0:23:63.11:0,63,1801	0/0:20,0:19:54.12:0,54,1636	0/0:15,0:14:39.13:0,39,1266	0/0:24,0:23:63.16:0,63,2026	0/0:16,0:16:39.13:0,39,1218	0/0:15,0:15:45.14:0,45,1437	0/0:14,0:14:36.10:0,36,1102	0/0:9,0:9:21.06:0,21,655	0/0:21,0:20:57.07:0,57,1698	0/0:33,0:33:87.20:0,87,2803	0/0:13,0:13:33.04:0,33,846	0/0:19,0:18:51.13:0,51,1603	0/0:17,0:17:45.03:0,45,1301	0/0:8,0:8:9.03:0,9,318	0/0:23,0:23:69.22:0,69,2059	0/0:17,0:17:48.15:0,48,1621	0/0:29,0:29:84.21:0,84,2630	0/0:15,0:14:33.10:0,33,1055	0/0:21,0:21:60.20:0,60,1897	0/0:26,0:24:75.16:0,75,2232	0/0:10,0:10:30.08:0,30,979
chr10	67290872	.	C	CTT	7751.20	PASS	AB=0.730;AC=41;AF=0.732;AN=56;BaseQRankSum=1.172;DP=557;FS=4.928;HRun=13;HaplotypeScore=103.6009;InbreedingCoeff=0.7006;MQ=48.47;MQ0=12;MQRankSum=-4.673;QD=17.66;ReadPosRankSum=-1.624;VQSLOD=3.7954;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:13,17:35:50.94:704,51,0	1/1:3,6:9:17.55:212,18,0	0/0:13,0:5:5.94:0,6,50	0/0:10,0:5:5.66:0,6,36	0/1:9,0:16:2.51:68,0,3	1/1:12,15:25:44.91:494,45,0	1/1:14,13:26:42.60:427,43,0	1/1:15,0:23:50.68:467,51,0	1/1:14,7:21:38.81:384,39,0	1/1:8,5:11:14.97:163,15,0	1/1:6,12:19:41.54:482,42,0	1/1:10,7:20:42.72:419,43,0	0/0:18,0:16:29.91:0,30,259	1/1:12,6:19:30.93:264,31,0	1/1:5,5:12:20.35:164,20,0	1/1:16,8:23:53.48:599,53,0	1/1:10,19:35:64.24:715,64,0	1/1:6,5:13:26:261,26,0	0/1:15,5:18:8.93:135,0,9	0/1:12,5:19:26.30:219,0,26	1/1:1,7:9:11.52:127,12,0	0/0:21,0:23:35.55:0,36,302	0/0:19,0:18:20.79:0,21,185	0/0:35,0:35:68.36:0,68,592	1/1:6,7:14:22.37:254,22,0	1/1:6,12:19:42:514,42,0	1/1:16,9:26:54.28:557,54,0	1/1:2,3:4:9.03:122,9,0
chr10	67291179	.	T	TA	8939.93	PASS	AB=0.591;AC=33;AF=0.589;AN=56;BaseQRankSum=-4.669;DP=598;FS=3.512;HRun=9;HaplotypeScore=65.8442;InbreedingCoeff=0.7512;MQ=66.43;MQ0=2;MQRankSum=-5.370;QD=22.86;ReadPosRankSum=-0.603;VQSLOD=5.5225;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:41:99:0,110,943	0/0:10,0:10:26.99:0,27,234	0/0:20,0:17:32.97:0,33,281	0/0:17,0:16:18.26:0,18,289	0/0:20,0:18:35.95:0,36,308	1/1:4,21:25:25.02:489,25,0	1/1:2,9:11:27.07:298,27,0	1/1:7,23:30:66.14:716,66,0	1/1:2,26:28:20.14:678,20,0	1/1:10,17:26:6.06:442,6,0	0/1:4,13:17:32.96:353,0,33	1/1:4,14:18:33.06:353,33,0	0/0:18,0:18:47.94:0,48,412	1/1:1,11:12:30.08:332,30,0	1/1:2,25:27:69.09:735,69,0	1/1:3,24:27:40.09:656,40,0	0/0:29,0:29:71.97:0,72,625	0/1:4,6:9:6.22:104,0,6	1/1:1,13:15:41.95:446,42,0	1/1:2,21:23:57.01:600,57,0	1/1:2,27:29:63.17:697,63,0	0/0:16,1:17:11.81:0,12,331	0/0:13,0:13:26.97:0,27,234	0/0:22,0:22:53.96:0,54,469	0/1:7,18:24:23.95:385,0,24	1/1:6,28:34:55.01:793,55,0	1/1:0,21:20:54.14:590,54,0	1/1:1,11:12:4.03:273,4,0
chr10	67291343	.	TAGTA	T	711.98	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=1.904;DP=638;FS=31.923;HRun=0;HaplotypeScore=145.0508;InbreedingCoeff=0.2999;MQ=48.67;MQ0=8;MQRankSum=2.311;QD=7.91;ReadPosRankSum=0.292;VQSLOD=1.3398;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:22:36.03:0,36,779	0/0:12,0:12:33.11:0,33,811	0/1:27,0:22:10.08:10,0,693	0/0:21,0:14:21.05:0,21,369	1/1:8,18:25:51.10:800,51,0	0/0:25,0:23:57.11:0,57,806	0/0:21,0:15:21.07:0,21,299	0/0:40,0:39:27.48:0,27,948	0/0:25,0:24:48.08:0,48,589	0/0:40,0:38:36.26:0,36,1121	0/0:16,0:14:5.95:0,6,70	0/0:14,0:13:6.02:0,6,104	0/0:29,0:28:60.18:0,60,1362	0/0:21,0:19:27.14:0,27,540	0/0:22,0:22:45.07:0,45,564	0/0:20,0:20:42.13:0,42,611	0/0:37,0:37:78.30:0,78,2156	0/0:12,0:10:12.04:0,12,193	0/1:16,0:15:2.02:2,0,187	0/0:25,0:25:19.95:0,20,522	0/0:11,0:8:6.47:0,6,80	0/0:20,0:19:30.15:0,30,1018	0/0:26,0:26:35.19:0,35,1207	0/0:26,0:26:45.09:0,45,1033	0/0:26,0:25:35.89:0,36,528	0/0:26,0:26:51.16:0,51,673	0/1:21,0:21:9.99:10,0,66	0/0:9,0:9:2.99:0,3,24
chr10	67291357	.	G	GTAAA	3457.45	PASS	AB=1.000;AC=30;AF=0.536;AN=56;BaseQRankSum=10.306;DP=577;FS=8.629;HRun=0;HaplotypeScore=138.4389;InbreedingCoeff=0.4755;MQ=53.47;MQ0=7;MQRankSum=-10.846;QD=9.91;ReadPosRankSum=-0.442;VQSLOD=2.5654;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:21:47.87:0,48,689	0/0:13,0:13:36.10:0,36,601	0/0:23,0:21:1:0,1,658	0/0:15,0:11:20.20:0,20,353	0/0:23,0:23:35.21:0,35,449	0/1:28,0:26:30.30:164,0,30	1/1:14,0:13:20.78:152,21,0	1/1:37,0:37:36.37:489,36,0	0/1:19,0:19:20.04:137,0,20	1/1:34,0:33:1.69:304,2,0	0/1:11,0:9:11.98:34,0,12	1/1:11,0:10:6.02:81,6,0	0/0:27,0:26:69.15:0,69,1096	1/1:17,0:15:17.66:121,18,0	0/1:22,0:22:19.24:140,0,19	1/1:16,0:16:20.80:148,21,0	0/0:37,0:37:99:0,102,1751	1/1:10,0:8:14.92:119,15,0	1/1:9,8:20:13.24:252,13,0	1/1:25,0:25:41.38:337,41,0	0/1:10,0:9:9.72:78,0,10	0/0:22,0:21:45.11:0,45,884	0/0:24,0:24:38.19:0,38,953	0/0:21,0:21:57:0,57,893	1/1:27,0:26:49.89:385,50,0	1/1:21,0:21:14.35:420,14,0	0/1:18,0:18:14.02:50,0,14	1/1:9,0:9:3.01:46,3,0
chr10	67291361	.	G	GTAAGTAAGTAAGTAAGTAAGTAAATAAA	50248.63	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=3.095;DP=631;FS=5.855;HRun=0;HaplotypeScore=365.5931;InbreedingCoeff=0.9295;MQ=51.96;MQ0=7;MQRankSum=-10.248;QD=122.86;ReadPosRankSum=-0.139;VQSLOD=3.3226;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:18:45.15:0,45,2095	0/0:14,0:14:42.11:0,42,1878	0/0:21,0:19:42.01:0,42,1279	0/0:11,0:8:16.27:0,16,550	0/0:23,0:23:57.10:0,57,2893	1/1:25,0:23:62.96:3995,63,0	1/1:16,0:15:39.10:2140,39,0	1/1:35,0:35:47.86:1847,48,0	1/1:19,0:19:57.06:2881,57,0	1/1:37,1:37:99:7948,99,0	1/1:3,1:20:26.98:682,27,0	1/1:1,2:17:6.02:782,6,0	0/0:26,0:25:63.22:0,63,3604	1/1:17,0:15:41.98:2678,42,0	1/1:24,0:24:57.15:3314,57,0	1/1:16,0:16:48.16:3415,48,0	0/0:38,0:38:99:0,109,5699	1/1:12,0:10:18.04:1177,18,0	1/1:18,0:18:45.10:2378,45,0	1/1:25,0:26:75.17:5306,75,0	1/1:9,0:8:18.04:766,18,0	0/0:25,0:24:60.18:0,60,2533	0/0:24,0:24:57.18:0,57,2720	0/0:21,0:21:57.15:0,57,2735	1/1:27,0:26:69.23:4489,69,0	1/1:2,1:37:64.95:5668,65,0	1/1:2,1:29:3.01:391,3,0	1/1:5,1:20:3.01:391,3,0
chr10	67291595	.	A	AAAAC	4831.80	PASS	AB=0.556;AC=33;AF=0.589;AN=56;BaseQRankSum=1.442;DP=478;FS=0.000;HRun=0;HaplotypeScore=96.8255;InbreedingCoeff=0.8545;MQ=71.44;MQ0=9;MQRankSum=-4.271;QD=17.07;ReadPosRankSum=-5.542;VQSLOD=3.2214;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:28:71.76:0,72,582	0/0:4,0:7:17.99:0,18,176	0/0:32,0:20:48.26:0,48,404	0/0:26,0:19:43.87:0,44,437	0/0:10,0:10:20.83:0,21,190	0/1:4,15:20:13.71:148,0,14	1/1:20,0:20:11.53:198,12,0	0/0:16,0:15:37.53:0,38,317	1/1:3,12:19:9.03:202,9,0	1/1:15,0:15:32.91:290,33,0	1/1:2,1:10:14.97:241,15,0	1/1:14,0:14:32.84:299,33,0	0/0:11,0:11:4.17:0,4,334	1/1:12,2:16:32.42:284,32,0	1/1:13,2:19:35.62:397,36,0	1/1:4,15:21:18.85:400,19,0	0/0:14,0:19:43:0,43,409	1/1:13,0:12:28.67:256,29,0	1/1:15,0:15:35.93:333,36,0	1/1:12,0:14:38.91:370,39,0	1/1:4,15:24:4.37:87,4,0	0/0:13,0:13:33.23:0,33,350	0/0:9,0:9:17.61:0,18,131	0/0:21,0:22:53.94:0,54,536	1/1:16,0:17:41.89:485,42,0	1/1:19,0:19:25.98:491,26,0	1/1:15,0:12:6.02:145,6,0	1/1:7,0:9:21.01:206,21,0
chr10	67292055	.	G	GGGT	2576.75	PASS	AB=0.925;AC=40;AF=0.714;AN=56;BaseQRankSum=-2.074;DP=251;FS=13.058;HRun=0;HaplotypeScore=76.9488;InbreedingCoeff=0.5097;MQ=80.01;MQ0=0;MQRankSum=-4.634;QD=14.16;ReadPosRankSum=4.401;VQSLOD=2.1632;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:9,0:9:17.50:42,0,18	1/1:1,0:1:1.82:5,2,0	0/0:17,0:13:18.76:0,19,252	0/0:17,0:13:10.97:0,11,150	0/1:6,0:6:0:0,0,0	1/1:2,3:6:5.99:111,6,0	1/1:3,10:13:8.97:118,9,0	0/1:15,0:15:7.39:52,0,7	1/1:6,2:8:10.02:158,10,0	1/1:3,0:3:6:54,6,0	1/1:3,1:4:1.60:27,2,0	1/1:16,2:18:24.66:351,25,0	0/0:8,0:8:17.97:0,18,154	1/1:10,1:11:12.69:239,13,0	1/1:2,6:9:12.91:259,13,0	1/1:2,2:4:8.49:133,8,0	1/1:11,0:11:4.58:105,5,0	1/1:1,4:9:12.04:239,12,0	0/1:4,3:7:12.89:120,0,13	1/1:3,0:3:2.96:20,3,0	1/1:15,1:16:5.50:30,5,0	0/0:8,0:8:12.48:0,12,129	0/0:7,0:7:14.68:0,15,159	0/0:12,0:12:14.64:0,15,155	1/1:9,1:10:7.85:133,8,0	1/1:3,3:7:11.94:138,12,0	1/1:7,2:9:26.04:331,26,0	1/1:3,0:3:8.69:92,9,0
chr10	67292056	.	G	GGT	919.36	PASS	AB=0.926;AC=25;AF=0.463;AN=54;BaseQRankSum=0.627;DP=250;FS=72.843;HRun=0;HaplotypeScore=58.4327;InbreedingCoeff=0.0595;MQ=80.23;MQ0=0;MQRankSum=-2.806;QD=5.57;ReadPosRankSum=5.557;VQSLOD=-0.4301;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:9,0:9:1.92:2,0,32	1/1:1,0:1:2.88:15,3,0	0/0:17,0:13:21.91:0,22,238	0/0:17,0:13:10.55:0,11,156	./.	1/1:7,0:7:5.95:61,6,0	0/1:12,1:13:15.26:66,0,15	1/1:14,0:14:11.34:97,11,0	0/1:8,0:8:27.74:60,0,28	1/1:2,0:2:6:54,6,0	0/0:4,0:4:0.03:0,0,1	0/1:18,0:18:69:101,0,69	0/0:8,0:8:17.94:0,18,144	0/1:11,0:11:35.02:66,0,35	0/1:10,0:10:6.12:90,0,6	0/1:5,0:5:20.44:39,0,20	0/1:5,0:12:13.20:77,0,13	1/1:9,0:9:12:106,12,0	0/1:6,0:6:21.13:21,0,60	0/0:3,0:3:2.94:0,3,18	0/1:6,6:15:37.79:38,0,38	0/0:8,0:8:15.89:0,16,149	0/0:7,0:7:16.77:0,17,172	0/0:12,0:12:14.63:0,15,150	1/1:9,0:9:7.77:67,8,0	1/1:7,0:7:8.69:62,9,0	0/1:9,0:9:47.35:65,0,47	0/0:3,0:3:2.66:0,3,13
chr10	67292057	.	G	GT	560.12	PASS	AB=1.000;AC=19;AF=0.352;AN=54;BaseQRankSum=0.378;DP=251;FS=52.699;HRun=0;HaplotypeScore=52.0012;InbreedingCoeff=0.1541;MQ=81.71;MQ0=0;MQRankSum=-1.321;QD=4.09;ReadPosRankSum=4.386;VQSLOD=1.1860;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:11.46:0,11,60	0/0:1,0:1:2.92:0,3,17	0/0:18,0:14:20.32:0,20,228	0/0:17,0:13:18.32:0,18,170	./.	1/1:6,0:6:4.99:19,5,0	0/1:13,0:13:14.33:17,0,14	1/1:2,14:16:32.84:342,33,0	0/1:7,0:7:30.23:30,0,31	1/1:3,0:3:5.99:54,6,0	0/0:4,0:4:4.96:0,5,31	0/1:18,0:18:58.27:58,0,96	0/0:9,0:9:17.99:0,18,154	0/1:11,0:11:31.02:31,0,47	0/1:10,0:10:7.16:33,0,7	0/1:5,0:5:10.75:11,0,30	0/0:12,0:12:25.19:0,25,138	1/1:9,0:9:10.98:48,11,0	0/0:6,0:6:4.23:0,4,67	0/0:3,0:3:2.96:0,3,19	0/1:14,0:14:3.55:4,0,43	0/0:7,0:7:15.90:0,16,149	0/0:7,0:7:18.46:0,18,166	0/0:12,0:12:14.70:0,15,147	1/1:9,0:9:6.33:38,6,0	0/1:7,0:7:16.86:25,0,17	0/1:9,0:9:15.51:16,0,62	0/0:3,0:3:7.50:0,7,46
chr10	67292274	.	C	CATTTGCATGCAG	37091.77	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-2.268;DP=409;FS=25.758;HRun=0;HaplotypeScore=125.9303;InbreedingCoeff=0.9825;MQ=80.04;MQ0=0;MQRankSum=-13.700;QD=119.65;ReadPosRankSum=0.457;VQSLOD=2.9729;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:16,5:27:48.16:2641,48,0	1/1:2,4:7:21.07:1149,21,0	0/0:19,0:18:54.17:0,54,1683	0/0:23,0:23:69.23:0,69,2153	1/1:7,14:22:51.13:2387,51,0	1/1:4,9:13:36.12:2005,36,0	1/1:8,7:15:39.13:1862,39,0	1/1:16,2:20:54.19:2864,54,0	1/1:8,4:13:30.10:1723,30,0	1/1:5,3:10:24.08:1200,24,0	1/1:4,3:8:12.04:567,12,0	1/1:5,8:13:36.12:2208,36,0	0/0:10,0:10:27.09:0,27,931	1/1:5,8:18:39.13:2384,39,0	1/1:8,7:17:33.11:1760,33,0	1/1:3,6:10:27.09:1619,27,0	1/1:14,5:23:39.13:2425,39,0	1/1:5,3:9:18.06:1010,18,0	1/1:11,1:15:39.13:1657,39,0	1/1:5,7:12:30.10:1503,30,0	1/1:14,2:17:24.08:1404,24,0	0/0:13,0:13:39.13:0,39,1428	0/0:13,0:13:39.13:0,39,1448	0/0:21,0:21:60.21:0,60,2181	1/1:1,7:9:21.07:1311,21,0	1/1:4,4:10:30.10:1451,30,0	1/1:5,4:14:27.09:1211,27,0	1/1:2,4:6:12.04:750,12,0
chr10	67292928	.	AT	A	9247.12	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=15.850;DP=633;FS=1.741;HRun=8;HaplotypeScore=101.2135;InbreedingCoeff=0.9995;MQ=74.87;MQ0=0;MQRankSum=-1.414;QD=25.33;ReadPosRankSum=2.064;VQSLOD=5.0216;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:48,1:49:99:0,112,1627	0/0:10,0:10:27.08:0,27,326	0/0:19,0:19:50.70:0,51,567	0/0:13,0:13:27.35:0,27,315	0/0:29,1:30:58.29:0,58,986	1/1:1,19:20:54.08:522,54,0	1/1:2,15:17:42.07:406,42,0	0/0:23,0:23:60.18:0,60,715	1/1:1,24:25:69.11:666,69,0	1/1:5,24:29:69.11:666,69,0	1/1:1,19:20:57.09:550,57,0	1/1:0,20:20:60.10:579,60,0	0/0:20,0:20:48.15:0,48,580	1/1:1,17:19:50.11:470,50,0	1/1:4,25:29:72.11:695,72,0	1/1:3,13:16:33.05:319,33,0	0/0:37,0:37:99:0,102,1216	1/1:2,24:26:69.11:666,69,0	1/1:3,24:27:72.57:690,73,0	1/1:2,23:26:71.15:672,71,0	1/1:3,10:13:27.04:261,27,0	0/0:16,0:16:48.15:0,48,579	0/0:20,0:20:60.16:0,60,712	0/0:31,0:31:72.22:0,72,870	1/1:0,20:20:54.08:521,54,0	1/1:1,19:20:57.09:550,57,0	1/1:1,22:23:63.10:608,63,0	1/1:0,15:15:42.07:406,42,0
chr10	67296850	.	G	GTT	4625.80	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=9.433;DP=609;FS=1.352;HRun=9;HaplotypeScore=97.8725;InbreedingCoeff=0.9877;MQ=74.18;MQ0=1;MQRankSum=-2.644;QD=9.27;ReadPosRankSum=1.380;VQSLOD=2.1626;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:43:72.34:249,72,0	1/1:0,0:9:22.46:77,22,0	0/0:13,0:13:26.97:0,27,261	0/0:13,0:12:14.14:0,14,212	1/1:2,0:39:76.40:302,76,0	1/1:1,1:18:35.45:157,35,0	1/1:3,1:28:26.49:194,26,0	1/1:5,32:38:99:1377,100,0	1/1:2,0:15:26.38:90,26,0	1/1:4,0:26:57.27:197,57,0	1/1:4,0:25:39.94:147,40,0	1/1:1,0:18:39.93:137,40,0	0/0:14,0:14:36.07:0,36,383	1/1:2,0:9:14.97:51,15,0	1/1:4,1:23:40.44:175,40,0	1/1:2,0:11:14.97:51,15,0	1/1:0,0:21:42.42:145,42,0	1/1:1,0:16:29.94:103,30,0	1/1:8,0:23:40.92:187,41,0	1/1:1,1:25:29.39:223,29,0	1/1:2,0:14:27.92:95,28,0	0/0:18,0:19:45:0,45,534	0/0:33,0:33:87.19:0,87,924	0/0:18,0:18:54.12:0,54,566	1/1:4,0:24:44.92:154,45,0	1/1:1,0:24:57.39:197,57,0	1/1:3,0:27:47.36:163,47,0	1/1:2,0:22:44.92:154,45,0
chr10	67298071	.	CA	C	8418.35	PASS	AB=0.967;AC=38;AF=0.679;AN=56;BaseQRankSum=9.716;DP=593;FS=1.528;HRun=10;HaplotypeScore=62.4798;InbreedingCoeff=0.8682;MQ=73.24;MQ0=0;MQRankSum=-1.432;QD=20.09;ReadPosRankSum=1.736;VQSLOD=5.9139;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:75.09:0,75,783	0/0:15,0:15:45.07:0,45,469	0/1:13,1:14:10.61:11,0,115	0/1:8,0:8:3.04:3,0,171	0/0:25,1:26:46.13:0,46,729	1/1:3,21:24:53.98:469,54,0	1/1:1,15:16:41.99:365,42,0	1/1:3,16:20:40.93:411,41,0	1/1:2,14:16:38.99:339,39,0	1/1:3,24:27:41.80:592,42,0	1/1:2,25:28:67.99:578,68,0	1/1:1,15:16:44.99:391,45,0	0/0:21,1:22:37.10:0,37,630	1/1:2,22:25:65.02:553,65,0	1/1:5,27:33:77.01:657,77,0	1/1:4,25:29:41.80:592,42,0	0/0:21,0:21:54.13:0,54,589	1/1:3,14:17:41.99:365,42,0	1/1:4,19:23:56.96:493,57,0	1/1:6,19:25:65:548,65,0	1/1:3,15:18:41.98:365,42,0	0/0:22,0:22:60.13:0,60,641	0/0:18,0:18:51.12:0,51,550	0/0:16,2:18:16.06:0,16,405	1/1:3,23:26:62.98:547,63,0	1/1:1,23:24:68.97:596,69,0	1/1:2,17:19:44.98:391,45,0	1/1:5,6:11:17.99:156,18,0
chr10	67298288	.	A	ACT	27411.57	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-14.317;DP=738;FS=1.722;HRun=0;HaplotypeScore=77.6109;InbreedingCoeff=0.9991;MQ=82.28;MQ0=4;MQRankSum=-5.203;QD=44.72;ReadPosRankSum=2.860;VQSLOD=6.6265;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,47:49:99:2198,120,0	1/1:0,10:10:27.09:495,27,0	0/0:13,0:13:33.10:0,33,467	0/0:27,0:27:63.13:0,63,822	1/1:1,20:21:48.16:878,48,0	1/1:1,24:25:69.24:1264,69,0	1/1:2,23:26:60.21:1099,60,0	1/1:4,19:23:57.18:990,57,0	1/1:0,27:26:69.24:1260,69,0	1/1:3,20:23:63.22:1142,63,0	1/1:0,16:16:48.16:879,48,0	1/1:2,29:30:57.20:1042,57,0	0/0:24,0:24:60.20:0,60,859	1/1:1,26:28:60:1099,60,0	1/1:1,28:30:68.85:1263,69,0	1/1:1,25:26:63.22:1154,63,0	1/1:2,35:37:96.33:1759,96,0	1/1:1,26:27:75.26:1375,75,0	1/1:2,22:24:66.20:1135,66,0	1/1:1,17:19:48.16:863,48,0	1/1:4,75:83:99:3733,205,0	0/0:21,0:21:54.17:0,54,752	0/0:8,0:8:24.05:0,24,305	0/0:32,0:32:93.29:0,93,1294	1/1:1,15:16:39.13:715,39,0	1/1:2,30:33:90.27:1530,90,0	1/1:3,21:24:57.20:1043,57,0	1/1:0,13:13:27.09:494,27,0
chr10	67298730	.	A	ATT	11685.01	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-1.467;DP=445;FS=4.906;HRun=8;HaplotypeScore=92.5671;InbreedingCoeff=0.9214;MQ=72.68;MQ0=1;MQRankSum=-3.084;QD=30.91;ReadPosRankSum=0.881;VQSLOD=4.9219;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,0:33:29.45:172,29,0	1/1:0,0:2:2.50:9,2,0	0/0:13,0:13:22.73:0,23,251	0/0:13,0:12:21.05:0,21,234	1/1:2,0:12:24.83:86,25,0	1/1:1,20:21:63.21:992,63,0	1/1:3,13:17:41.63:624,42,0	1/1:3,21:25:62.69:934,63,0	1/1:2,15:18:35.61:532,36,0	1/1:4,15:19:48.16:759,48,0	1/1:3,4:7:12.04:191,12,0	1/1:4,14:18:36.12:571,36,0	0/0:10,0:10:24.06:0,24,268	1/1:0,13:13:24.08:381,24,0	1/1:4,15:18:45.15:701,45,0	1/1:0,13:13:39.13:619,39,0	1/1:3,0:29:59.89:206,60,0	1/1:3,21:24:54.18:857,54,0	1/1:2,20:22:57.13:829,57,0	1/1:4,15:19:11.70:625,12,0	1/1:2,3:5:9.03:143,9,0	0/0:4,0:4:9.02:0,9,100	0/0:6,0:6:12.01:0,12,125	0/0:21,0:21:42.04:0,42,455	1/1:0,13:13:33.11:524,33,0	1/1:2,15:18:47.61:695,48,0	1/1:1,19:20:54.18:857,54,0	1/1:3,8:11:24.08:381,24,0
chr10	67299793	.	A	AAAAT	255.40	PASS	AC=8;AF=0.190;AN=42;BaseQRankSum=-1.998;DP=69;FS=4.253;HRun=0;HaplotypeScore=17.7677;InbreedingCoeff=0.3993;MQ=56.20;MQ0=0;MQRankSum=0.215;QD=36.49;ReadPosRankSum=-0.809;VQSLOD=2.7676;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,2:3:6.02:147,6,0	1/1:0,1:1:3.01:73,3,0	0/0:7,0:4:3.01:0,3,49	./.	1/1:0,1:1:3.01:74,3,0	0/0:4,0:4:8.99:0,9,119	./.	0/0:8,0:8:21.07:0,21,347	0/0:1,0:1:3.01:0,3,49	./.	0/0:2,0:2:6.02:0,6,99	0/0:3,0:3:3.01:0,3,49	0/0:2,0:2:6.02:0,6,99	0/0:3,0:3:6.02:0,6,99	./.	0/0:1,0:1:3.01:0,3,50	1/1:1,1:2:3.01:73,3,0	0/0:8,0:8:21.05:0,21,310	0/0:2,0:2:6.02:0,6,99	0/0:1,0:1:3.01:0,3,50	0/0:2,0:2:5.98:0,6,69	./.	./.	./.	0/0:4,0:4:9.03:0,9,149	0/0:1,0:1:3.01:0,3,48	0/0:2,0:2:5.99:0,6,70	0/0:8,0:7:18.06:0,18,297
chr10	67299969	.	CG	C	401.24	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.596;DP=332;FS=23.948;HRun=3;HaplotypeScore=55.5688;InbreedingCoeff=0.3101;MQ=34.72;MQ0=93;MQRankSum=-3.944;QD=15.43;ReadPosRankSum=-1.783;VQSLOD=1.6297;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:21:57.11:0,57,772	0/0:5,0:4:9.03:0,9,129	0/0:1,1:1:2.04:0,2,6	0/0:5,2:3:3:0,3,28	0/0:6,0:6:12.04:0,12,172	0/0:16,0:8:21.07:0,21,300	0/0:8,0:3:6.02:0,6,86	1/1:11,15:15:2.01:477,2,0	0/0:5,0:3:6.02:0,6,86	0/0:9,0:8:18.02:0,18,235	0/0:10,0:10:9.03:0,9,128	0/0:6,0:5:12.04:0,12,172	0/0:10,0:9:27.09:0,27,387	0/0:10,0:10:18.02:0,18,234	0/0:13,0:11:15.05:0,15,214	0/0:8,0:7:21.07:0,21,300	0/0:23,0:11:24.08:0,24,345	0/0:16,0:4:9.03:0,9,129	0/0:15,0:14:39.13:0,39,543	0/0:8,0:7:18.06:0,18,258	0/0:18,0:7:18.06:0,18,257	0/0:7,0:7:18.06:0,18,258	0/0:8,0:6:15.05:0,15,215	0/0:21,0:13:5.08:0,5,422	0/0:9,0:9:18.06:0,18,257	0/0:8,0:7:18.06:0,18,258	0/0:14,0:13:33.11:0,33,469	0/0:10,0:1:3.01:0,3,43
chr10	67300007	.	GATATTTTT	G	6152.02	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=6.951;DP=269;FS=61.511;HRun=0;HaplotypeScore=74.7245;InbreedingCoeff=0.8355;MQ=50.51;MQ0=10;MQRankSum=-9.271;QD=42.43;ReadPosRankSum=-1.913;VQSLOD=2.2318;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:16:39.13:0,39,1560	0/0:6,0:6:8.58:0,9,312	0/0:11,0:4:4.57:0,5,131	0/0:18,0:11:30.10:0,30,921	0/0:7,0:7:18.06:0,18,658	1/1:6,4:7:9.03:241,9,0	1/1:3,5:6:6.02:161,6,0	1/1:3,8:10:21.07:558,21,0	1/1:1,4:4:9.03:241,9,0	1/1:0,9:9:24.06:586,24,0	1/1:0,7:7:18.06:473,18,0	1/1:0,4:4:12.04:322,12,0	0/0:9,0:9:27.09:0,27,1080	1/1:2,4:6:6.02:161,6,0	1/1:1,12:13:18.06:482,18,0	1/1:3,10:13:27.09:725,27,0	0/0:16,0:15:27.05:0,27,1032	1/1:3,2:3:6.02:161,6,0	1/1:7,5:12:12.04:291,12,0	1/1:3,4:7:12.04:277,12,0	0/0:6,1:7:0.88:0,1,2	0/0:8,0:8:18.06:0,18,760	0/0:9,0:9:24.08:0,24,1011	0/0:14,0:14:36.12:0,36,1324	1/1:2,8:10:12.04:320,12,0	1/1:3,7:9:18.05:429,18,0	1/1:2,10:12:24.08:644,24,0	1/1:2,1:1:3.01:81,3,0
chr10	67300031	.	A	AGT	1144.81	PASS	AB=0.929;AC=26;AF=0.520;AN=50;BaseQRankSum=1.475;DP=340;FS=1.004;HRun=0;HaplotypeScore=102.2495;InbreedingCoeff=0.0088;MQ=45.17;MQ0=12;MQRankSum=-0.730;QD=5.04;ReadPosRankSum=-1.384;VQSLOD=2.1549;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:17,0:17:24.74:38,0,25	1/1:2,4:6:3.01:31,3,0	./.	./.	0/0:4,0:9:3.01:0,3,32	0/1:11,0:10:0:0,0,0	0/1:8,1:9:25.82:38,0,26	0/0:15,0:13:2.80:0,3,32	1/1:6,3:9:3.01:44,3,0	0/1:15,1:15:8.57:139,0,9	./.	0/1:12,1:11:36.21:67,0,36	0/0:10,0:10:6.02:0,6,65	1/1:9,1:9:3:44,3,0	1/1:16,2:18:9.03:132,9,0	0/1:11,3:14:17.38:161,0,17	1/1:15,0:21:16.24:134,16,0	0/1:6,0:6:26.39:38,0,26	1/1:13,1:13:6.02:89,6,0	0/0:6,0:5:3.01:0,3,32	0/1:12,0:12:0.94:1,0,27	0/0:10,0:9:2.84:0,3,14	0/0:11,0:10:3:0,3,33	0/0:13,0:12:14.99:0,15,162	1/1:8,1:9:6.02:87,6,0	0/1:17,0:17:16.93:126,0,17	1/1:14,1:15:6.02:85,6,0	0/1:4,3:6:35.43:35,0,45
chr10	67300307	.	T	TTTTG	3823.23	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-10.205;DP=583;FS=8.473;HRun=0;HaplotypeScore=89.2095;InbreedingCoeff=0.9585;MQ=63.58;MQ0=5;MQRankSum=0.637;QD=41.56;ReadPosRankSum=2.260;VQSLOD=3.8679;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,29:35:72.25:1734,72,0	1/1:3,4:8:6.02:145,6,0	0/0:17,0:13:15.05:0,15,233	0/0:16,0:12:20.93:0,21,288	1/1:6,22:27:57.11:1290,57,0	0/0:20,0:20:45.12:0,45,664	0/0:19,0:18:36.11:0,36,553	0/0:30,0:30:48.14:0,48,732	0/0:21,0:21:51.17:0,51,804	0/0:25,0:23:60.19:0,60,912	0/0:31,0:31:72.19:0,72,1106	0/0:28,0:28:51.16:0,51,784	0/0:13,0:13:33.11:0,33,537	0/0:18,0:18:45.10:0,45,635	0/0:19,0:19:45.14:0,45,707	0/0:18,0:18:36.12:0,36,586	1/1:2,17:21:27.09:654,27,0	0/0:32,0:32:64.74:0,65,972	0/0:31,0:30:45.07:0,45,592	0/0:24,0:24:57.19:0,57,916	0/0:11,0:11:21.07:0,21,340	0/0:15,0:15:39.13:0,39,614	0/0:18,0:18:45.12:0,45,701	0/0:23,0:23:57.15:0,57,899	0/0:16,0:16:39.13:0,39,622	0/0:18,0:18:30.10:0,30,483	0/0:23,0:23:60.19:0,60,953	0/0:5,0:5:15.05:0,15,244
chr10	67304236	.	GC	G	2945.21	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=10.135;DP=676;FS=1.409;HRun=3;HaplotypeScore=64.1249;InbreedingCoeff=0.9976;MQ=75.86;MQ0=0;MQRankSum=-1.997;QD=29.75;ReadPosRankSum=1.451;VQSLOD=3.2079;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,36:37:93.29:1146,93,0	1/1:0,6:6:18.06:223,18,0	0/0:13,0:13:36.12:0,36,510	0/0:19,0:19:42.18:0,42,683	1/1:0,24:24:57.18:695,57,0	0/0:25,0:25:75.21:0,75,1056	0/0:29,0:29:87.29:0,87,1251	0/0:33,0:33:96.32:0,96,1361	0/0:18,0:18:51.17:0,51,733	0/0:18,0:18:54.17:0,54,762	0/0:18,0:18:51.17:0,51,733	0/0:16,0:16:45.15:0,45,643	0/0:24,0:24:66.22:0,66,950	0/0:19,0:19:51.17:0,51,723	0/0:24,0:24:69.22:0,69,974	0/0:29,0:29:87.28:0,87,1233	1/1:1,31:32:84.26:1041,84,0	0/0:17,0:17:45.15:0,45,648	0/0:32,0:32:93.27:0,93,1279	0/0:30,0:30:90.29:0,90,1276	0/0:46,0:46:99:0,135,1911	0/0:21,0:21:57.19:0,57,820	0/0:16,0:16:45.15:0,45,647	0/0:33,0:32:93.31:0,93,1336	0/0:20,0:20:57.18:0,57,802	0/0:37,0:37:99:0,108,1500	0/0:28,0:28:84.28:0,84,1209	0/0:12,0:12:33.11:0,33,475
chr10	67305242	.	G	GC	24737.18	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-9.852;DP=746;FS=1.913;HRun=0;HaplotypeScore=69.4903;InbreedingCoeff=0.9960;MQ=82.65;MQ0=0;MQRankSum=-7.773;QD=41.86;ReadPosRankSum=2.241;VQSLOD=5.6424;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,68:68:99:2922,184,0	1/1:2,8:10:21.07:335,21,0	0/0:28,0:28:81.18:0,81,1045	0/0:27,0:27:78.24:0,78,1059	1/1:0,22:22:63.21:1001,63,0	1/1:0,22:22:63.21:1005,63,0	1/1:1,19:20:54.18:862,54,0	1/1:0,34:34:93.30:1455,93,0	1/1:2,29:31:72.24:1148,72,0	1/1:1,26:27:81.28:1291,81,0	1/1:1,22:23:57.19:910,57,0	1/1:1,26:27:60.20:957,60,0	0/0:26,0:26:78.26:0,78,1090	1/1:0,20:20:54.18:861,54,0	1/1:0,18:18:45.15:718,45,0	1/1:0,25:25:66.23:1053,66,0	1/1:1,34:35:87.30:1389,87,0	1/1:1,19:20:48.16:766,48,0	1/1:2,19:21:54.08:827,54,0	1/1:0,26:26:66.22:1040,66,0	1/1:2,59:61:99:2538,160,0	0/0:24,0:24:72.24:0,72,995	0/0:26,0:26:78.23:0,78,1043	0/0:24,0:24:63.21:0,63,880	1/1:0,18:18:51.17:814,51,0	1/1:0,31:31:90.30:1412,90,0	1/1:0,27:27:75.26:1195,75,0	1/1:0,5:5:15.05:239,15,0
chr10	67305420	.	CACTGGCA	C	21390.61	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=15.987;DP=654;FS=0.301;HRun=0;HaplotypeScore=186.1233;InbreedingCoeff=0.9758;MQ=87.78;MQ0=0;MQRankSum=-18.711;QD=60.09;ReadPosRankSum=0.479;VQSLOD=4.4061;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,154,5859	0/0:16,0:16:48.16:0,48,1900	0/0:37,0:37:99:0,102,3143	0/0:24,0:24:45.83:0,46,2188	0/0:22,0:22:63.22:0,63,2438	1/1:1,18:19:48.16:1264,48,0	1/1:1,16:18:36.12:948,36,0	1/1:3,22:25:66.20:1542,66,0	1/1:0,23:23:63.22:1659,63,0	1/1:2,25:27:78.25:1985,78,0	1/1:0,21:21:60.21:1580,60,0	1/1:3,20:23:48.16:1264,48,0	0/0:28,0:28:81.28:0,81,3195	1/1:2,18:20:45.15:1185,45,0	1/1:2,13:15:33.11:869,33,0	1/1:4,14:18:39.13:1027,39,0	0/0:31,0:31:90.31:0,90,3543	1/1:2,4:6:9.03:229,9,0	1/1:2,16:18:45.13:1078,45,0	1/1:2,27:30:75.21:1915,75,0	1/1:6,17:23:32.91:750,33,0	0/0:27,0:27:81.28:0,81,3266	0/0:23,0:23:69.21:0,69,2510	0/0:37,0:37:99:0,108,4112	1/1:4,14:18:30.06:731,30,0	1/1:1,27:28:81.24:2023,81,0	1/1:1,21:22:45.15:1185,45,0	1/1:0,2:2:6.02:158,6,0
chr10	67306614	.	A	ACC	622.30	PASS	AB=0.606;AC=7;AF=0.140;AN=50;BaseQRankSum=1.718;DP=232;FS=24.944;HRun=0;HaplotypeScore=66.3977;InbreedingCoeff=0.4765;MQ=55.23;MQ0=14;MQRankSum=-0.764;QD=16.82;ReadPosRankSum=0.855;VQSLOD=1.6048;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:7,12:18:6.17:371,0,6	1/1:0,2:2:6.02:78,6,0	0/0:26,0:11:15.05:0,15,217	0/0:20,0:8:11.04:0,11,90	1/1:0,1:1:2.92:17,3,0	0/0:14,0:14:31.09:0,31,271	0/0:2,0:2:3.01:0,3,38	0/0:31,0:26:68.55:0,69,809	0/0:4,0:4:8.21:0,8,67	0/0:8,0:8:20.72:0,21,211	0/0:7,0:6:14.26:0,14,167	0/0:8,0:8:11.22:0,11,104	0/0:1,0:1:3.01:0,3,32	0/0:5,0:4:6:0,6,65	0/0:2,0:2:3.01:0,3,39	0/0:5,0:5:9.95:0,10,72	1/1:5,9:13:29.98:280,30,0	0/0:5,0:4:8.85:0,9,67	0/0:14,0:14:41.79:0,42,508	0/0:2,0:2:2.92:0,3,17	./.	./.	0/0:2,0:2:6.02:0,6,81	./.	0/0:3,0:3:8.24:0,8,77	0/0:18,0:17:51.02:0,51,571	0/0:7,0:7:12.03:0,12,149	0/0:5,0:3:8.10:0,8,61
chr10	67306623	.	A	ACCC	956.44	PASS	AC=8;AF=0.160;AN=50;BaseQRankSum=2.140;DP=223;FS=3.156;HRun=2;HaplotypeScore=75.9140;InbreedingCoeff=0.6490;MQ=56.28;MQ0=12;MQRankSum=-1.698;QD=26.57;ReadPosRankSum=1.794;VQSLOD=1.4699;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:11,6:16:29.92:529,30,0	1/1:1,1:2:2.83:65,3,0	0/0:27,0:12:26.37:0,26,326	0/0:20,0:8:13.66:0,14,144	1/1:1,1:2:3.01:58,3,0	0/0:11,0:11:27.04:0,27,296	0/0:2,0:2:3.01:0,3,49	0/0:31,0:27:71.89:0,72,850	0/0:5,0:5:11.38:0,11,90	0/0:5,0:5:12.92:0,13,140	0/0:5,0:4:9.01:0,9,100	0/0:9,0:9:13.28:0,13,117	0/0:1,0:1:3.01:0,3,48	0/0:5,0:4:6.02:0,6,78	0/0:4,0:4:7.60:0,8,43	0/0:5,0:5:11.24:0,11,92	1/1:8,4:13:27.08:439,27,0	0/0:5,0:4:12.02:0,12,121	0/0:10,0:10:28.47:0,28,290	0/0:1,0:2:0.89:0,1,2	./.	./.	0/0:2,0:2:6.02:0,6,100	./.	0/0:4,0:4:11.84:0,12,98	0/0:16,0:15:45.11:0,45,527	0/0:9,0:9:20.23:0,20,173	0/0:3,0:4:12.02:0,12,118
chr10	67306625	.	C	CA	1581.39	PASS	AB=0.667;AC=31;AF=0.674;AN=46;BaseQRankSum=0.346;DP=226;FS=5.768;HRun=9;HaplotypeScore=75.2262;InbreedingCoeff=0.6359;MQ=56.07;MQ0=12;MQRankSum=-2.079;QD=11.14;ReadPosRankSum=0.260;VQSLOD=2.7701;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:12:14.67:0,15,71	0/0:1,0:1:1.55:0,2,4	0/0:27,0:12:7.05:0,7,193	0/0:20,0:8:9.58:0,10,69	0/0:2,0:2:0:0,0,0	1/1:5,6:11:15.04:166,15,0	0/1:1,1:2:0:0,0,0	1/1:25,1:30:28.73:174,29,0	1/1:2,3:5:11.98:118,12,0	1/1:3,3:6:9.50:101,9,0	1/1:4,1:4:3.01:33,3,0	1/1:5,4:9:6.48:65,6,0	./.	1/1:2,3:4:3.01:33,3,0	1/1:2,3:5:11.96:113,12,0	1/1:3,2:5:2.97:20,3,0	0/0:11,0:11:18.87:0,19,92	1/1:3,3:5:9.02:98,9,0	1/1:4,6:10:18.52:200,19,0	./.	./.	./.	0/0:2,0:2:6:0,6,52	./.	1/1:3,2:5:6.02:67,6,0	1/1:9,9:17:4.21:259,4,0	1/1:5,4:9:19.78:184,20,0	1/1:4,2:6:9.02:99,9,0
chr10	67306674	.	G	GAGAT	2254.61	PASS	AB=0.793;AC=34;AF=0.850;AN=40;BaseQRankSum=0.287;DP=215;FS=2.064;HRun=0;HaplotypeScore=81.2772;InbreedingCoeff=0.2249;MQ=50.74;MQ0=3;MQRankSum=-0.977;QD=13.11;ReadPosRankSum=-1.149;VQSLOD=2.6494;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:5,10:17:0.13:162,0,0	1/1:1,0:1:2.99:24,3,0	./.	./.	./.	1/1:12,0:12:9.42:81,9,0	1/1:2,0:2:3.01:38,3,0	1/1:26,0:25:12:131,12,0	./.	1/1:6,0:5:9.03:191,9,0	1/1:5,0:5:9.03:179,9,0	1/1:6,0:6:3.01:55,3,0	./.	./.	1/1:6,0:6:3.01:38,3,0	1/1:5,0:5:2.92:17,3,0	1/1:6,15:21:24.08:553,24,0	1/1:10,0:10:6.02:100,6,0	1/1:10,2:12:17.93:239,18,0	1/1:2,6:8:9.03:167,9,0	1/1:5,0:5:4.81:29,5,0	./.	0/0:2,0:2:6.02:0,6,93	0/0:2,0:2:2.97:0,3,20	1/1:5,0:5:3.01:70,3,0	1/1:11,2:14:12:208,12,0	./.	0/1:11,0:10:6.66:80,0,7
chr10	67306710	.	T	TAGATAGATAGAA	5077.24	PASS	AB=0.875;AC=34;AF=0.630;AN=54;BaseQRankSum=1.356;DP=262;FS=4.129;HRun=0;HaplotypeScore=79.4342;InbreedingCoeff=0.4749;MQ=43.74;MQ0=6;MQRankSum=-3.143;QD=21.88;ReadPosRankSum=-1.768;VQSLOD=2.7296;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:16,0:16:22.70:23,0,91	0/0:2,0:2:3.47:0,3,26	0/0:7,0:1:2.99:0,3,24	0/0:4,0:3:8.98:0,9,81	0/0:7,0:7:2.94:0,3,18	1/1:15,0:15:33.28:305,33,0	1/1:4,0:4:9.01:92,9,0	0/1:31,0:30:40.23:40,0,408	1/1:4,0:4:5.95:42,6,0	1/1:0,6:8:23.95:512,24,0	1/1:2,6:10:20.90:602,21,0	1/1:0,8:10:3.01:181,3,0	0/0:1,0:1:3:0,3,25	./.	1/1:6,0:6:8.88:74,9,0	1/1:9,0:9:17.89:165,18,0	0/1:27,0:26:99:117,0,155	1/1:8,1:9:17.91:414,18,0	1/1:15,0:15:42.02:775,42,0	1/1:11,0:11:24:354,24,0	1/1:5,0:5:11.87:80,12,0	0/0:1,0:1:2.94:0,3,18	0/0:3,0:3:6.02:0,6,181	0/0:3,0:3:5.96:0,6,44	1/1:5,1:6:11.95:230,12,0	1/1:13,0:13:38.86:546,39,0	0/1:0,12:13:0:0,0,0	1/1:19,0:17:30.58:525,31,0
chr10	67308348	.	G	GGA	4618.09	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-11.783;DP=621;FS=1.956;HRun=0;HaplotypeScore=67.5463;InbreedingCoeff=0.9908;MQ=75.70;MQ0=3;MQRankSum=-1.063;QD=47.61;ReadPosRankSum=1.384;VQSLOD=6.1451;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,18:19:51.17:935,51,0	1/1:1,16:17:48.16:880,48,0	0/0:14,0:14:39.13:0,39,548	0/0:11,0:11:27.09:0,27,366	1/1:2,34:34:96.33:1759,96,0	0/0:24,0:24:69.23:0,69,987	0/0:13,0:13:39.13:0,39,559	0/0:25,0:25:69.22:0,69,957	0/0:16,0:16:48.16:0,48,688	0/0:39,0:39:99:0,117,1644	0/0:21,0:21:60.19:0,60,841	0/0:17,0:17:48.16:0,48,686	0/0:27,0:27:66.21:0,66,926	0/0:24,0:24:69.23:0,69,989	0/0:24,0:24:72.24:0,72,1031	0/0:22,0:22:60.18:0,60,841	1/1:2,22:24:57.20:1044,57,0	0/0:11,0:11:27.09:0,27,386	0/0:18,0:18:48.16:0,48,685	0/0:42,0:42:99:0,117,1656	0/0:12,0:12:36.12:0,36,515	0/0:23,0:23:69.21:0,69,954	0/0:21,0:21:60.20:0,60,856	0/0:5,0:5:12.04:0,12,172	0/0:27,0:27:75.24:0,75,1058	0/0:34,0:34:93.30:0,93,1315	0/0:33,0:33:96.32:0,96,1375	0/0:21,0:21:57.19:0,57,816
chr10	67309093	.	CTG	C	1524.77	PASS	AB=0.861;AC=25;AF=0.481;AN=52;BaseQRankSum=-1.830;DP=705;FS=9.112;HRun=0;HaplotypeScore=108.9522;InbreedingCoeff=0.2424;MQ=66.69;MQ0=7;MQRankSum=0.882;QD=3.67;ReadPosRankSum=-0.645;VQSLOD=1.5409;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:65.93:0,66,590	0/0:7,0:7:17.82:0,18,131	./.	./.	0/0:22,0:21:10.61:0,11,57	0/1:14,7:21:27.82:28,0,38	1/1:15,8:23:5.60:65,6,0	0/0:23,0:23:2.70:0,3,12	0/1:22,2:23:8.10:95,0,8	0/1:23,0:23:51.86:52,0,72	1/1:9,5:15:2.49:70,2,0	1/1:18,9:27:11.58:130,12,0	0/0:22,0:21:21.03:0,21,271	1/1:28,0:29:13.26:199,13,0	0/1:16,10:26:20.51:186,0,21	0/1:14,3:17:6.87:27,0,7	0/0:36,0:35:26.96:0,27,238	1/1:18,2:20:12.95:122,13,0	1/1:20,4:24:11.46:80,11,0	0/1:15,2:20:12.47:147,0,12	1/1:35,3:39:27.07:239,27,0	0/0:25,0:25:14.98:0,15,159	0/0:18,0:18:24.01:0,24,274	0/1:51,2:52:71.82:72,0,502	0/1:12,1:11:3.92:60,0,4	0/0:29,1:29:6.41:0,6,71	0/1:20,6:26:10.61:26,0,11	1/1:13,3:16:8.66:101,9,0
chr10	67309102	.	T	TGC	1460.25	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=9.061;DP=718;FS=0.000;HRun=0;HaplotypeScore=114.9959;InbreedingCoeff=0.9860;MQ=54.71;MQ0=11;MQRankSum=-2.091;QD=11.59;ReadPosRankSum=3.795;VQSLOD=3.3382;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,44:55:21.65:654,22,0	1/1:0,8:8:17.61:318,18,0	0/0:14,0:7:21.03:0,21,205	0/0:28,0:16:44.63:0,45,422	1/1:22,2:23:15.66:237,16,0	0/0:20,0:20:25.52:0,26,220	0/0:27,0:26:42.49:0,42,361	0/0:27,0:27:74.50:0,75,610	0/0:22,0:21:50.83:0,51,407	0/0:26,0:26:74.66:0,75,668	0/0:17,0:17:26.95:0,27,219	0/0:28,0:28:49.92:0,50,417	0/0:25,0:24:62.88:0,63,625	0/0:28,0:28:70.95:0,71,558	0/0:22,0:22:47.86:0,48,407	0/0:15,0:15:26.26:0,26,221	1/1:6,33:38:15.26:407,15,0	0/0:22,0:22:57.64:0,58,454	0/0:21,0:21:59.31:0,59,440	0/0:22,0:22:53.26:0,53,411	0/0:44,0:44:82.63:0,83,655	0/0:26,0:26:41.24:0,41,379	0/0:18,0:18:38.93:0,39,396	0/0:53,0:52:99:0,132,1289	0/0:18,0:16:47.88:0,48,390	0/0:33,0:32:76.65:0,77,731	0/0:24,0:24:53.32:0,53,425	0/0:12,0:12:29.60:0,30,224
chr10	67309414	.	TCA	T	1164.58	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.668;DP=835;FS=7.275;HRun=0;HaplotypeScore=97.7978;InbreedingCoeff=0.9989;MQ=70.78;MQ0=0;MQRankSum=-0.895;QD=36.39;ReadPosRankSum=-3.805;VQSLOD=4.6719;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:77,0:77:99:0,226,4106	0/0:9,0:9:27.09:0,27,506	0/0:23,0:23:63.19:0,63,1113	0/0:24,0:24:60.20:0,60,1030	0/0:42,0:42:99:0,120,2205	0/0:27,0:27:81.28:0,81,1492	0/0:21,0:21:60.19:0,60,1092	1/1:3,29:32:87.28:1259,87,0	0/0:26,0:26:75.26:0,75,1388	0/0:29,0:28:81.28:0,81,1504	0/0:22,0:22:63.22:0,63,1141	0/0:42,0:42:99:0,114,2028	0/0:26,0:26:75.26:0,75,1397	0/0:29,0:29:84.29:0,84,1563	0/0:40,0:40:99:0,117,2176	0/0:33,0:33:93.32:0,93,1742	0/0:44,0:44:99:0,132,2426	0/0:25,0:25:75.21:0,75,1368	0/0:20,0:20:60.21:0,60,1110	0/0:22,0:22:66.23:0,66,1236	0/0:41,0:41:99:0,117,2185	0/0:32,0:32:96.33:0,96,1790	0/0:16,0:16:45.15:0,45,842	0/0:47,0:47:99:0,138,2492	0/0:18,0:18:51.17:0,51,955	0/0:28,0:28:81.28:0,81,1509	0/0:24,0:23:69.24:0,69,1286	0/0:16,0:16:42.14:0,42,771
chr10	67311630	.	TGGCTC	T	946.72	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.698;DP=553;FS=23.283;HRun=0;HaplotypeScore=103.9491;InbreedingCoeff=0.9977;MQ=85.78;MQ0=0;MQRankSum=-6.009;QD=45.08;ReadPosRankSum=-1.114;VQSLOD=1.6819;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:84.29:0,84,2560	0/0:10,0:10:27.09:0,27,855	0/0:25,0:25:72.23:0,72,2030	0/0:21,0:21:60.20:0,60,1725	0/0:28,0:28:78.25:0,78,2305	0/0:24,0:24:72.25:0,72,2283	0/0:10,0:10:30.09:0,30,881	1/1:6,15:21:48.16:1042,48,0	0/0:24,0:24:72.21:0,72,2035	0/0:31,0:31:87.30:0,87,2727	0/0:12,0:12:33.11:0,33,981	0/0:13,0:13:39.13:0,39,1170	0/0:12,0:12:36.12:0,36,1142	0/0:20,0:20:60.21:0,60,1885	0/0:14,0:14:42.14:0,42,1310	0/0:17,0:17:48.16:0,48,1478	0/0:38,0:37:99:0,111,3501	0/0:19,0:19:57.20:0,57,1807	0/0:18,0:18:51.18:0,51,1557	0/0:18,0:18:51.18:0,51,1616	0/0:18,0:18:54.19:0,54,1689	0/0:11,0:11:33.10:0,33,976	0/0:18,0:18:54.17:0,54,1585	0/0:18,0:18:54.19:0,54,1713	0/0:18,0:18:54.19:0,54,1691	0/0:17,0:17:48.16:0,48,1481	0/0:32,0:32:96.33:0,96,2958	0/0:18,0:18:54.19:0,54,1709
chr10	67311644	.	AGT	A	840.96	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.489;DP=565;FS=1.782;HRun=0;HaplotypeScore=71.7344;InbreedingCoeff=0.9971;MQ=80.99;MQ0=0;MQRankSum=-4.129;QD=40.05;ReadPosRankSum=-3.067;VQSLOD=4.4811;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:81.28:0,81,1548	0/0:11,0:11:33.11:0,33,632	0/0:25,0:24:66.22:0,66,1228	0/0:23,0:23:69.15:0,69,1194	0/0:24,0:24:69.24:0,69,1306	0/0:28,0:28:81.28:0,81,1544	0/0:9,0:9:27.09:0,27,521	1/1:0,21:21:63.20:936,63,0	0/0:23,0:23:69.24:0,69,1323	0/0:28,0:28:81.28:0,81,1544	0/0:9,0:9:27.09:0,27,521	0/0:14,0:14:42.13:0,42,767	0/0:14,0:14:42.14:0,42,800	0/0:19,0:19:57.20:0,57,1100	0/0:17,0:17:51.17:0,51,975	0/0:16,0:16:48.16:0,48,912	0/0:43,0:42:99:0,123,2338	0/0:23,0:23:66.18:0,66,1214	0/0:21,0:21:63.21:0,63,1154	0/0:20,0:20:60.21:0,60,1159	0/0:17,0:17:51.17:0,51,985	0/0:10,0:10:30.10:0,30,580	0/0:15,0:15:42.14:0,42,811	0/0:21,0:21:60.21:0,60,1159	0/0:14,0:14:42.14:0,42,787	0/0:19,0:19:57.20:0,57,1091	0/0:34,0:34:99:0,99,1867	0/0:19,0:19:48.16:0,48,907
chr10	67311835	.	CTGGTT	C	506.02	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.730;DP=561;FS=1.191;HRun=0;HaplotypeScore=103.6205;InbreedingCoeff=0.7783;MQ=91.42;MQ0=0;MQRankSum=-3.618;QD=29.77;ReadPosRankSum=1.146;VQSLOD=3.3825;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:78.25:0,78,2293	0/0:6,0:6:15.05:0,15,455	0/0:24,0:24:63.22:0,63,1856	0/0:24,0:24:43.70:0,44,1247	1/1:2,15:17:30.10:600,30,0	0/0:30,0:30:84.29:0,84,2519	0/0:22,0:22:60.18:0,60,1700	0/0:35,0:35:93.32:0,93,2684	0/0:18,0:18:48.16:0,48,1454	0/0:14,0:14:42.14:0,42,1274	0/0:14,0:14:39.13:0,39,1182	0/0:19,0:19:51.18:0,51,1545	0/0:24,0:24:60.19:0,60,1752	0/0:15,0:15:33.11:0,33,968	0/0:28,0:28:84.29:0,84,2422	0/0:30,0:30:81.26:0,81,2355	0/0:19,0:19:51.18:0,51,1546	0/0:21,0:21:63.22:0,63,1818	0/0:16,0:16:36.12:0,36,1071	0/0:9,0:9:2.07:0,2,631	0/0:45,0:45:99:0,120,3419	0/0:3,0:3:9.03:0,9,238	0/0:12,0:12:30.10:0,30,874	0/0:26,0:26:72.25:0,72,2132	0/0:12,0:12:30.10:0,30,861	0/0:16,0:16:42.14:0,42,1206	0/0:20,0:20:57.20:0,57,1689	0/0:9,0:9:20.77:0,21,636
chr10	67312196	.	G	GAA	1838.53	PASS	AB=0.775;AC=34;AF=0.739;AN=46;BaseQRankSum=0.093;DP=313;FS=6.956;HRun=17;HaplotypeScore=55.3177;InbreedingCoeff=0.0969;MQ=72.04;MQ0=10;MQRankSum=0.274;QD=7.13;ReadPosRankSum=1.004;VQSLOD=-0.2556;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	1/1:50,0:17:8.93:95,9,0	0/0:47,0:15:11.06:0,11,80	./.	1/1:5,1:6:13.78:108,14,0	1/1:2,3:14:1.10:138,1,0	./.	0/1:9,0:9:25.92:82,0,26	1/1:17,0:17:10.47:80,10,0	1/1:2,8:11:20.81:187,21,0	1/1:2,6:8:5.91:52,6,0	0/1:13,0:13:11.49:11,0,51	1/1:3,4:7:4.25:39,4,0	0/1:3,5:9:30.16:51,0,30	0/1:7,0:11:30.27:54,0,30	./.	0/1:5,1:11:10.71:41,0,11	1/1:8,7:18:0.36:221,0,0	1/1:4,6:10:8.92:74,9,0	1/1:2,1:3:3.01:36,3,0	0/0:2,0:2:4.79:0,5,26	0/0:5,0:5:4.91:0,5,29	0/1:1,1:2:15.11:29,0,15	1/1:5,14:21:22.61:184,23,0	1/1:9,0:9:14.91:114,15,0	1/1:12,1:13:28.22:226,28,0	1/1:10,1:14:6.83:158,7,0
chr10	67312936	.	C	CT	11825.15	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-16.243;DP=626;FS=1.788;HRun=6;HaplotypeScore=58.2357;InbreedingCoeff=0.9991;MQ=71.44;MQ0=1;MQRankSum=-1.456;QD=33.31;ReadPosRankSum=2.226;VQSLOD=4.9631;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:93.03:0,93,931	0/0:9,0:9:27.06:0,27,275	0/0:12,0:11:24.04:0,24,244	0/0:19,0:17:23.67:0,24,231	0/0:21,0:21:63.14:0,63,642	1/1:2,15:17:45.14:564,45,0	1/1:4,14:18:39.12:491,39,0	0/0:42,0:41:99:0,105,1057	1/1:0,13:13:36.12:453,36,0	1/1:0,14:15:45.11:549,45,0	1/1:2,16:18:51.16:637,51,0	1/1:2,11:13:33.11:415,33,0	0/0:27,0:27:72.15:0,72,727	1/1:1,15:16:45.14:566,45,0	1/1:1,15:16:36.12:453,36,0	1/1:3,23:26:69.22:868,69,0	0/0:43,0:43:91.04:0,91,1028	1/1:2,21:23:60.19:755,60,0	1/1:2,22:24:66.20:816,66,0	1/1:4,26:30:78.25:974,78,0	1/1:3,18:21:51.16:642,51,0	0/0:17,0:17:48.11:0,48,489	0/0:25,0:25:72.16:0,72,734	0/0:19,0:19:48.10:0,48,489	1/1:2,25:27:75.24:936,75,0	1/1:2,36:38:99:1309,105,0	1/1:2,25:27:72.23:906,72,0	1/1:0,13:13:39.12:491,39,0
chr10	67317125	.	C	CA	11768.92	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-15.642;DP=670;FS=18.262;HRun=8;HaplotypeScore=65.1960;InbreedingCoeff=0.9978;MQ=64.91;MQ0=2;MQRankSum=1.355;QD=27.56;ReadPosRankSum=2.047;VQSLOD=3.5204;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:92.99:0,93,843	0/0:10,0:10:30.02:0,30,274	0/0:19,0:14:29.96:0,30,258	0/0:28,0:20:20.12:0,20,318	0/0:43,0:43:82.26:0,82,930	1/1:1,17:17:51.15:589,51,0	1/1:1,15:16:42.12:485,42,0	1/1:7,19:26:60.16:675,60,0	1/1:6,22:28:60.04:672,60,0	1/1:7,39:46:99:1338,117,0	1/1:3,19:23:60.01:672,60,0	1/1:3,10:14:36.09:406,36,0	0/0:20,0:20:51.02:0,51,466	1/1:3,21:24:57.17:655,57,0	1/1:1,23:24:63.19:727,63,0	1/1:2,12:14:32.58:356,33,0	0/0:26,0:26:65.99:0,66,597	1/1:6,24:32:71.88:791,72,0	1/1:7,17:24:47.88:553,48,0	1/1:4,29:33:87.22:989,87,0	1/1:1,10:11:18.05:208,18,0	0/0:18,0:18:45.01:0,45,412	0/0:25,0:25:66.02:0,66,600	0/0:19,0:19:45.02:0,45,411	1/1:2,27:29:57.17:658,57,0	1/1:1,30:31:66.34:991,66,0	1/1:4,17:21:48.14:554,48,0	1/1:0,13:13:39.12:450,39,0
chr10	67319073	.	AAAAAAG	A	1394.03	PASS	AB=0.990;AC=20;AF=0.357;AN=56;BaseQRankSum=7.571;DP=511;FS=1.481;HRun=0;HaplotypeScore=117.5086;InbreedingCoeff=-0.2525;MQ=48.37;MQ0=34;MQRankSum=-6.750;QD=4.29;ReadPosRankSum=6.936;VQSLOD=1.6080;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:38.13:0,38,369	0/0:9,0:8:20.63:0,21,156	0/0:17,0:3:8.92:0,9,77	0/0:23,0:11:22.58:0,23,159	0/0:24,0:23:39.42:0,39,490	0/1:14,1:13:36.60:138,0,37	0/1:23,0:23:99:134,0,99	0/1:29,0:26:96.26:96,0,149	1/1:10,0:8:5.20:71,5,0	0/1:16,0:15:18.45:217,0,18	0/1:17,0:15:53.56:54,0,119	1/1:13,1:14:14.76:152,15,0	0/0:14,0:14:20.50:0,20,429	0/1:11,0:11:29.67:30,0,47	0/1:25,0:24:59.49:187,0,59	0/1:14,0:13:41.52:51,0,42	0/0:27,0:24:44.14:0,44,324	0/1:18,1:17:83.39:83,0,111	0/1:17,0:16:34.46:34,0,119	0/1:20,0:19:18.88:19,0,197	0/1:9,0:6:1.76:2,0,52	0/0:14,0:12:30.06:0,30,563	0/0:11,0:10:17.84:0,18,237	0/0:22,0:20:28.72:0,29,429	0/1:21,1:21:74.99:75,0,155	0/1:19,0:19:22.84:70,0,23	0/1:24,0:22:24.12:138,0,24	0/1:21,0:18:9.47:9,0,92
chr10	67319088	.	TATTCATAG	T	408.57	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.113;DP=450;FS=1.636;HRun=0;HaplotypeScore=127.7834;InbreedingCoeff=0.9670;MQ=57.29;MQ0=8;MQRankSum=-3.286;QD=45.40;ReadPosRankSum=1.061;VQSLOD=3.7144;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:57.20:0,57,2573	0/0:7,0:6:18.06:0,18,713	0/0:25,0:8:24.08:0,24,943	0/0:31,0:18:50.19:0,50,1815	0/0:19,0:19:54.18:0,54,2337	0/0:13,0:12:36.12:0,36,1526	0/0:16,0:16:36.12:0,36,1453	0/0:31,0:29:84.29:0,84,3639	0/0:8,0:8:18.06:0,18,649	0/0:14,0:14:42.12:0,42,1681	0/0:15,0:15:36.12:0,36,1431	0/0:10,0:10:30.10:0,30,1119	0/0:10,0:10:27.09:0,27,1244	1/1:0,9:9:18.06:499,18,0	0/0:18,0:18:48.16:0,48,1988	0/0:11,0:11:27.09:0,27,1212	0/0:20,0:20:51.18:0,51,2327	0/0:11,0:11:30.10:0,30,1265	0/0:19,0:18:51.17:0,51,2251	0/0:17,0:17:51.17:0,51,2090	0/0:9,0:8:24.08:0,24,995	0/0:15,0:14:39.13:0,39,1759	0/0:13,0:13:36.12:0,36,1622	0/0:14,0:14:29.21:0,29,1234	0/0:24,0:24:66.23:0,66,2839	0/0:15,0:15:33.11:0,33,1398	0/0:22,0:22:60.10:0,60,2549	0/0:14,0:14:27.09:0,27,1203
chr10	67321079	.	A	AAC	8714.09	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=0.513;DP=600;FS=10.700;HRun=0;HaplotypeScore=83.4654;InbreedingCoeff=0.8879;MQ=68.06;MQ0=19;MQRankSum=-0.129;QD=20.65;ReadPosRankSum=0.245;VQSLOD=4.3442;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:29,1:29:72.24:1090,72,0	1/1:8,0:8:16.77:191,17,0	0/0:42,0:19:28.27:0,28,432	0/0:42,0:26:54.18:0,54,728	0/0:14,0:14:33.07:0,33,439	1/1:15,0:15:3.01:35,3,0	1/1:31,0:30:81.26:1266,81,0	0/0:16,0:14:33.10:0,33,415	1/1:13,3:16:36.87:505,37,0	1/1:6,16:22:42.09:639,42,0	1/1:3,7:10:6.02:87,6,0	1/1:16,0:16:30.99:487,31,0	0/0:12,0:12:36.11:0,36,474	1/1:6,21:27:9.03:157,9,0	1/1:16,0:16:6.02:85,6,0	1/1:21,2:23:42.11:620,42,0	1/1:40,1:41:98.02:1180,98,0	1/1:18,0:17:6.02:91,6,0	1/1:13,0:13:21.07:301,21,0	1/1:5,15:19:30.09:372,30,0	1/1:48,0:47:8.99:98,9,0	0/0:14,0:14:36.10:0,36,462	0/0:11,0:11:26.89:0,27,289	0/0:27,0:27:66.17:0,66,849	1/1:13,1:14:9.03:137,9,0	1/1:5,20:25:60.18:900,60,0	1/1:2,19:21:14.91:193,15,0	1/1:8,0:8:21.04:280,21,0
chr10	67321084	.	AC	A	1244.56	PASS	AB=0.986;AC=21;AF=0.375;AN=56;BaseQRankSum=6.746;DP=604;FS=9.576;HRun=2;HaplotypeScore=91.9318;InbreedingCoeff=0.3852;MQ=64.89;MQ0=21;MQRankSum=2.351;QD=4.41;ReadPosRankSum=1.376;VQSLOD=-0.1002;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:29,1:29:36.58:189,37,0	1/1:6,0:6:6.24:45,6,0	0/0:38,0:15:42.07:0,42,527	0/0:38,0:22:54.18:0,54,722	0/0:15,0:15:41.34:0,41,523	0/0:16,0:16:5.49:0,5,35	1/1:30,1:30:35.14:182,35,0	0/0:18,0:15:35.19:0,35,450	0/1:16,2:18:3.07:133,0,3	0/1:23,0:23:36.58:37,0,150	0/1:8,0:8:9.43:28,0,9	1/1:16,0:16:1.78:55,2,0	0/0:16,0:16:35.69:0,36,470	0/0:31,0:31:11.54:0,12,89	0/0:15,0:15:3.94:0,4,11	0/1:25,0:25:36.11:60,0,36	1/1:39,3:40:21.81:246,22,0	0/0:19,0:18:4.26:0,4,13	0/1:9,0:9:59.81:70,0,60	1/1:19,0:18:14.04:204,14,0	0/0:47,0:46:11.06:0,11,130	0/0:14,0:14:37.67:0,38,481	0/0:9,0:9:25.84:0,26,255	0/0:29,0:29:71.83:0,72,971	0/0:16,1:17:9.96:0,10,72	0/1:26,0:26:43.13:43,0,125	0/1:21,0:21:20.43:20,0,46	1/1:8,0:8:16.84:121,17,0
chr10	67321085	.	C	CACCA	8930.10	PASS	AB=0.679;AC=36;AF=0.643;AN=56;BaseQRankSum=-1.637;DP=618;FS=2.515;HRun=0;HaplotypeScore=99.6460;InbreedingCoeff=0.6259;MQ=63.56;MQ0=21;MQRankSum=0.465;QD=20.44;ReadPosRankSum=1.728;VQSLOD=4.6970;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:31,0:30:64.41:1080,64,0	1/1:6,0:6:6.65:163,7,0	0/0:37,0:14:28.27:0,28,432	0/0:37,0:21:54.18:0,54,728	0/0:16,0:16:38.93:0,39,502	0/1:2,12:17:18.88:73,0,19	1/1:30,0:29:81.28:1299,81,0	0/0:18,0:15:30.04:0,30,410	1/1:17,0:18:42.13:602,42,0	1/1:24,0:24:9.88:609,10,0	1/1:8,0:9:6.02:87,6,0	1/1:16,0:16:33.11:529,33,0	0/0:15,0:20:35.61:0,36,575	0/1:30,0:31:19.80:169,0,20	1/1:1,15:17:6.02:173,6,0	1/1:21,3:29:48.10:747,48,0	1/1:41,0:39:65.85:1013,66,0	1/1:1,13:18:6.02:171,6,0	1/1:9,0:9:18.06:276,18,0	1/1:18,0:17:26.57:334,27,0	0/1:16,28:49:39.06:75,0,39	0/0:15,0:15:39.10:0,39,528	0/0:6,0:9:24.95:0,25,319	0/0:23,0:29:72.20:0,72,1078	0/1:7,9:18:19.77:181,0,20	1/1:26,0:26:57.63:852,58,0	1/1:21,0:21:15.05:218,15,0	1/1:7,0:7:21.04:280,21,0
chr10	67321312	.	CA	C	12136	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=17.292;DP=615;FS=0.965;HRun=2;HaplotypeScore=92.4902;InbreedingCoeff=0.9990;MQ=74.71;MQ0=0;MQRankSum=-2.354;QD=33.07;ReadPosRankSum=2.377;VQSLOD=4.8329;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,141,2078	0/0:7,0:7:21.04:0,21,292	0/0:18,0:18:54.16:0,54,761	0/0:20,0:20:60.17:0,60,803	0/0:21,0:21:54.15:0,54,807	1/1:1,22:23:60.18:720,60,0	1/1:1,19:20:42.13:504,42,0	1/1:0,22:22:66.18:778,66,0	1/1:1,13:14:39.12:467,39,0	1/1:3,24:27:72.22:864,72,0	1/1:0,12:12:30.09:360,30,0	1/1:0,17:17:51.16:612,51,0	0/0:26,0:26:72.17:0,72,976	1/1:0,17:17:45.14:539,45,0	1/1:0,14:14:39.12:468,39,0	1/1:1,25:26:75.23:899,75,0	0/0:38,0:38:99:0,114,1667	1/1:1,35:36:96.29:1152,96,0	1/1:1,24:25:72.22:864,72,0	1/1:0,13:13:36.11:432,36,0	1/1:0,22:22:63.19:756,63,0	0/0:24,0:24:72.23:0,72,1058	0/0:20,0:20:57.18:0,57,835	0/0:27,0:27:81.27:0,81,1214	1/1:0,16:16:48.15:576,48,0	1/1:2,27:29:81.23:958,81,0	1/1:1,25:26:75.23:899,75,0	1/1:0,8:8:24.07:288,24,0
chr10	67321660	.	CAGA	C	277.34	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.395;DP=677;FS=11.511;HRun=0;HaplotypeScore=88.3620;InbreedingCoeff=0.9896;MQ=63.61;MQ0=4;MQRankSum=1.238;QD=21.33;ReadPosRankSum=1.475;VQSLOD=2.5173;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,108,2319	0/0:8,0:8:24.08:0,24,485	0/0:22,0:12:24.08:0,24,439	0/0:20,0:11:21.06:0,21,360	1/1:0,13:12:24.08:371,24,0	0/0:13,0:13:39.13:0,39,837	0/0:43,0:43:99:0,111,2269	0/0:22,0:22:57.15:0,57,1131	0/0:27,0:27:78.26:0,78,1603	0/0:19,0:19:51.18:0,51,1095	0/0:16,0:16:42.14:0,42,889	0/0:29,0:29:78.26:0,78,1608	0/0:19,0:19:51.16:0,51,1050	0/0:31,0:31:84.29:0,84,1760	0/0:30,0:30:72.24:0,72,1509	0/0:30,0:30:78.22:0,78,1601	0/0:42,0:42:99:0,117,2383	0/0:23,0:23:66.23:0,66,1384	0/0:18,0:17:42.14:0,42,895	0/0:18,0:18:45.15:0,45,919	0/0:41,0:40:99:0,102,2095	0/0:23,0:23:63.21:0,63,1315	0/0:18,0:18:45.15:0,45,964	0/0:23,0:22:63.20:0,63,1277	0/0:19,0:19:54.17:0,54,1101	0/0:34,0:34:90.30:0,90,1877	0/0:29,0:29:78.25:0,78,1619	0/0:11,0:11:33.11:0,33,709
chr10	67322524	.	T	TGG	254.69	PASS	AC=16;AF=0.571;AN=28;BaseQRankSum=4.274;DP=132;FS=22.857;HRun=0;HaplotypeScore=33.5118;InbreedingCoeff=0.6181;MQ=139.91;MQ0=0;MQRankSum=-3.902;QD=31.84;ReadPosRankSum=-3.090;VQSLOD=1.6691;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:18,0:18:38.62:0,39,761	0/0:26,0:26:75.22:0,75,1149	./.	1/1:0,1:1:3.01:60,3,0	./.	./.	./.	1/1:1,0:1:2.99:24,3,0	./.	./.	0/0:23,0:23:66.21:0,66,1044	./.	1/1:1,0:1:3.01:37,3,0	./.	./.	1/1:0,1:1:3.01:38,3,0	1/1:0,1:1:3.01:56,3,0	1/1:1,0:1:3.01:40,3,0	./.	0/0:16,0:16:48.16:0,48,783	0/0:14,0:14:42.13:0,42,660	0/0:23,0:23:69.22:0,69,1103	./.	1/1:0,1:1:3.01:60,3,0	1/1:0,1:1:3.01:60,3,0	./.
chr10	67323126	.	C	CCT	70.74	PASS	AB=1.000;AC=14;AF=0.467;AN=30;BaseQRankSum=3.435;DP=153;FS=23.320;HRun=0;HaplotypeScore=34.0751;InbreedingCoeff=0.6039;MQ=144.11;MQ0=0;MQRankSum=-4.446;QD=4.42;ReadPosRankSum=-4.229;VQSLOD=-0.5628;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:19,0:19:48.16:0,48,767	0/0:25,0:25:71.38:0,71,955	./.	0/1:1,0:1:0:0,0,0	./.	./.	1/1:0,4:4:5.93:39,6,0	./.	./.	./.	0/0:23,1:24:52.51:0,53,1104	./.	./.	1/1:2,0:2:3.01:38,3,0	./.	./.	0/1:1,0:1:0:0,0,0	1/1:1,0:1:3.01:42,3,0	0/1:2,0:2:0:0,0,0	0/0:23,0:23:66.23:0,66,1077	0/0:25,0:25:72.22:0,72,1142	0/0:14,0:14:42.14:0,42,681	0/1:2,0:2:0:0,0,0	1/1:1,0:1:3.01:39,3,0	1/1:0,2:2:2.97:20,3,0	./.
chr10	67323327	.	C	CA	10518.52	PASS	AB=0.943;AC=36;AF=0.643;AN=56;BaseQRankSum=4.310;DP=614;FS=0.341;HRun=0;HaplotypeScore=99.0851;InbreedingCoeff=0.8350;MQ=69.74;MQ0=0;MQRankSum=-4.530;QD=24.29;ReadPosRankSum=5.257;VQSLOD=5.5921;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:21,0:22:12.82:13,0,64	0/0:9,0:9:2.81:0,3,19	0/0:24,0:19:11.90:0,12,318	0/1:12,0:11:1.62:2,0,130	0/0:8,0:8:9.41:0,9,31	1/1:1,20:21:47.86:574,48,0	1/1:0,22:22:45.12:525,45,0	0/0:27,0:27:62.79:0,63,392	1/1:2,13:15:23.81:288,24,0	1/1:0,26:26:75.20:889,75,0	1/1:2,21:23:48.90:589,49,0	1/1:2,12:14:33.56:425,34,0	0/0:22,0:22:66.05:0,66,890	1/1:2,31:33:65.47:788,65,0	1/1:6,28:34:69.13:790,69,0	1/1:1,20:21:29.96:336,30,0	0/0:22,0:22:31.72:0,32,126	1/1:1,19:20:48.11:564,48,0	1/1:1,19:20:14.42:603,14,0	1/1:3,21:24:47.33:677,47,0	1/1:2,13:15:32.09:423,32,0	0/0:22,0:22:66.04:0,66,829	0/0:23,0:23:68.22:0,68,874	0/0:24,0:24:69.13:0,69,892	1/1:3,31:34:62.43:857,62,0	1/1:6,21:27:14.72:679,15,0	1/1:4,35:38:93.69:1139,94,0	1/1:0,10:10:30.09:359,30,0
chr10	67323328	.	C	CCCAAA	4427.11	PASS	AB=1.000;AC=35;AF=0.625;AN=56;BaseQRankSum=11.304;DP=619;FS=24.183;HRun=0;HaplotypeScore=163.7160;InbreedingCoeff=0.4942;MQ=69.69;MQ0=0;MQRankSum=-5.025;QD=9.44;ReadPosRankSum=6.737;VQSLOD=2.0171;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:2,0:24:37.42:796,37,0	1/1:0,0:9:17.66:342,18,0	0/0:23,0:19:48.94:0,49,574	0/0:13,0:11:20.80:0,21,203	1/1:0,0:11:21.07:399,21,0	1/1:21,0:21:16.53:103,17,0	1/1:21,0:21:34.29:132,34,0	0/0:6,0:25:38.57:0,39,231	1/1:14,0:14:1.14:49,1,0	1/1:26,0:26:50.10:219,50,0	0/1:22,0:22:5.57:61,0,6	0/1:14,0:14:8.76:36,0,9	0/0:22,0:22:66.22:0,66,1318	1/1:33,0:33:11.56:92,12,0	0/1:35,0:35:3.84:94,0,4	1/1:21,0:21:22.01:83,22,0	1/1:1,18:30:39.13:1220,39,0	1/1:19,0:20:33.67:127,34,0	1/1:20,0:20:16.12:136,16,0	0/1:25,0:25:13.71:50,0,14	0/1:15,0:15:3.27:53,0,3	0/0:21,0:21:63.21:0,63,1207	0/0:23,0:23:69.24:0,69,1363	0/0:23,0:23:66.20:0,66,1298	0/1:34,0:34:15.26:54,0,15	0/1:27,0:27:53.85:164,0,54	1/1:36,0:36:22.77:151,23,0	1/1:10,0:10:21.32:67,21,0
chr10	67323811	.	CGGA	C	1302.67	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.283;DP=746;FS=0.000;HRun=0;HaplotypeScore=104.4375;InbreedingCoeff=0.9995;MQ=87.05;MQ0=0;MQRankSum=-2.851;QD=32.57;ReadPosRankSum=2.795;VQSLOD=4.1780;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,111,2406	0/0:10,0:10:30.10:0,30,679	0/0:21,0:21:53.93:0,54,1145	0/0:30,0:30:72.22:0,72,1422	1/1:0,40:40:84.27:1398,84,0	0/0:18,0:18:54.19:0,54,1222	0/0:19,0:19:54.16:0,54,1138	0/0:35,0:35:96.32:0,96,2106	0/0:24,0:24:66.23:0,66,1478	0/0:31,0:31:93.32:0,93,2080	0/0:16,0:16:48.16:0,48,1088	0/0:38,0:38:99:0,114,2563	0/0:35,0:35:99:0,102,2269	0/0:25,0:25:72.22:0,72,1531	0/0:30,0:30:81.28:0,81,1816	0/0:24,0:24:69.24:0,69,1548	0/0:30,0:30:84.27:0,84,1859	0/0:20,0:20:57.57:0,58,1195	0/0:17,0:17:48.16:0,48,1082	0/0:19,0:19:54.19:0,54,1213	0/0:42,0:42:99:0,126,2659	0/0:27,0:27:78.25:0,78,1627	0/0:22,0:22:66.21:0,66,1452	0/0:29,0:29:81.23:0,81,1782	0/0:30,0:30:90.30:0,90,1996	0/0:23,0:23:69.21:0,69,1427	0/0:32,0:32:93.32:0,93,2069	0/0:20,0:20:60.21:0,60,1359
chr10	67324119	.	AT	A	1430.03	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=6.428;DP=621;FS=0.445;HRun=11;HaplotypeScore=100.6489;InbreedingCoeff=0.9673;MQ=73.24;MQ0=0;MQRankSum=-3.544;QD=15.89;ReadPosRankSum=1.224;VQSLOD=3.9294;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,19:21:50.93:419,51,0	1/1:2,8:10:20.97:172,21,0	0/0:10,0:9:13.07:0,13,114	0/0:13,2:15:20.85:0,21,230	1/1:7,34:43:96.78:765,97,0	0/0:19,0:19:42.11:0,42,448	0/0:12,0:12:31.32:0,31,323	0/0:42,2:44:43.58:0,44,824	0/0:18,0:18:51.11:0,51,535	0/0:33,0:33:87.15:0,87,908	0/0:20,0:20:32.50:0,33,551	0/0:20,1:22:35.32:0,35,550	0/0:24,0:24:66.16:0,66,698	0/0:17,0:17:33.08:0,33,352	0/0:28,0:28:78.18:0,78,823	0/0:28,0:28:75.16:0,75,783	1/1:2,12:16:31.03:233,31,0	0/0:22,0:23:59.91:0,60,601	0/0:17,0:17:36.07:0,36,372	0/0:26,0:26:54.10:0,54,555	0/0:9,0:9:24.04:0,24,247	0/0:32,1:33:53.45:0,53,739	0/0:17,2:19:7.86:0,8,494	0/0:15,0:15:36.04:0,36,364	0/0:32,1:33:65.56:0,66,888	0/0:18,1:19:17.45:0,17,386	0/0:27,0:27:75.17:0,75,791	0/0:19,0:19:41.67:0,42,415
chr10	67325788	.	T	TCC	29319.09	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-4.823;DP=753;FS=4.895;HRun=1;HaplotypeScore=98.7051;InbreedingCoeff=0.9966;MQ=86.02;MQ0=0;MQRankSum=-6.478;QD=51.98;ReadPosRankSum=3.669;VQSLOD=4.8699;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,40:41:99:1970,102,0	1/1:0,5:6:15.05:289,15,0	0/0:39,0:39:95.27:0,95,1305	0/0:39,0:39:78.67:0,79,1205	1/1:2,33:35:87.30:1656,87,0	1/1:0,22:22:60.21:1159,60,0	1/1:0,20:20:54.19:1044,54,0	1/1:4,37:41:99:2053,111,0	1/1:0,22:24:63.22:1217,63,0	1/1:0,19:19:57.20:1099,57,0	1/1:0,25:25:69.24:1330,69,0	1/1:1,29:30:87.30:1681,87,0	0/0:18,0:18:54.18:0,54,819	1/1:1,25:26:63.22:1217,63,0	1/1:2,31:34:87.26:1638,87,0	1/1:0,25:25:75.26:1449,75,0	1/1:0,21:21:60.21:1159,60,0	1/1:0,19:19:51.17:971,51,0	1/1:2,24:26:78.27:1491,78,0	1/1:0,23:25:72.16:1278,72,0	1/1:0,22:22:60.21:1159,60,0	0/0:30,0:30:90.23:0,90,1308	0/0:28,0:28:75.24:0,75,1126	0/0:34,0:33:99:0,99,1516	1/1:0,22:22:60.14:1159,60,0	1/1:2,33:35:96.33:1845,96,0	1/1:1,36:37:99:1933,102,0	1/1:0,9:9:27.09:522,27,0
chr10	67326298	.	T	TA	6871.66	PASS	AB=0.787;AC=44;AF=0.786;AN=56;BaseQRankSum=-0.085;DP=368;FS=0.000;HRun=9;HaplotypeScore=58.4213;InbreedingCoeff=0.4779;MQ=78.44;MQ0=1;MQRankSum=-2.470;QD=20.51;ReadPosRankSum=3.899;VQSLOD=5.3215;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,4:23:43.32:289,43,0	1/1:2,0:7:14.20:71,14,0	0/0:19,0:17:0.20:0,0,126	0/1:10,0:6:18.71:19,0,47	1/1:3,0:14:25.68:133,26,0	1/1:2,17:19:5.04:512,5,0	1/1:1,5:6:12.03:133,12,0	1/1:6,1:32:66.16:354,66,0	1/1:1,6:7:18.05:199,18,0	1/1:3,16:19:48.11:521,48,0	1/1:5,9:14:27.07:299,27,0	1/1:2,4:6:9.02:100,9,0	0/0:6,0:6:14.99:0,15,130	1/1:1,4:5:9.02:99,9,0	0/1:2,8:10:1.97:208,0,2	1/1:1,9:10:21.06:232,21,0	1/1:3,0:19:39.77:199,40,0	1/1:2,12:14:33.09:365,33,0	0/1:6,12:18:4.14:384,0,4	1/1:2,19:21:51.14:564,51,0	1/1:0,2:2:6.02:66,6,0	0/0:3,0:3:9:0,9,78	0/0:5,0:5:15:0,15,130	0/1:2,0:2:20.03:27,0,20	1/1:3,16:19:42.11:465,42,0	1/1:2,17:19:51.14:564,51,0	1/1:3,14:17:22.11:432,22,0	1/1:1,20:21:37.12:637,37,0
chr10	67326790	.	CG	C	11128.77	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=1.122;DP=537;FS=0.451;HRun=7;HaplotypeScore=56.7838;InbreedingCoeff=0.9971;MQ=81.07;MQ0=0;MQRankSum=-5.448;QD=25.29;ReadPosRankSum=3.174;VQSLOD=5.2690;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,36:38:99:1040,102,0	1/1:1,7:8:18.04:184,18,0	0/0:21,0:21:47.97:0,48,521	0/0:16,0:17:38.80:0,39,475	1/1:3,13:16:42.07:420,42,0	1/1:2,12:13:36.08:367,36,0	1/1:1,9:10:27.06:274,27,0	1/1:6,16:22:57.09:565,57,0	1/1:3,13:16:42.09:428,42,0	1/1:5,22:28:69.14:695,69,0	1/1:10,9:19:36.05:357,36,0	1/1:8,12:20:51.05:500,51,0	0/0:16,0:16:42.13:0,42,527	1/1:2,12:14:33.07:336,33,0	1/1:4,19:23:57.13:581,57,0	1/1:0,15:15:42.10:428,42,0	1/1:4,31:35:93.21:948,93,0	1/1:1,18:19:54.12:551,54,0	1/1:4,17:21:48.10:489,48,0	1/1:5,20:25:51.11:520,51,0	1/1:3,23:26:66.15:672,66,0	0/0:14,0:14:42.13:0,42,528	0/0:13,0:13:33.10:0,33,403	0/0:16,0:16:42.12:0,42,513	1/1:3,15:18:42.09:428,42,0	1/1:3,20:23:66.15:672,66,0	1/1:8,13:21:45.09:458,45,0	1/1:2,7:9:21.05:214,21,0
chr10	67326797	.	GT	G	2551.10	PASS	AB=0.947;AC=29;AF=0.518;AN=56;BaseQRankSum=12.022;DP=535;FS=3.774;HRun=1;HaplotypeScore=83.6140;InbreedingCoeff=-0.0201;MQ=83.31;MQ0=0;MQRankSum=-5.144;QD=5.92;ReadPosRankSum=10.102;VQSLOD=-0.1812;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:37,1:38:56.62:262,57,0	0/1:9,0:9:24.16:24,0,29	0/0:22,0:22:63.16:0,63,814	0/0:19,0:19:49.21:0,49,642	0/1:18,2:20:60.90:138,0,61	0/1:14,0:14:15.65:52,0,16	0/1:11,1:12:22.65:83,0,23	0/1:20,3:23:67.06:127,0,67	0/1:18,1:19:73.41:78,0,73	0/1:25,0:25:18.41:67,0,18	0/1:11,3:14:15.98:138,0,16	0/1:14,5:19:0.93:218,0,1	0/0:19,0:19:57.08:0,57,687	0/1:14,0:14:17.29:75,0,17	1/1:19,1:20:44.12:168,44,0	0/1:17,0:17:7.71:91,0,8	1/1:31,2:33:73.77:306,74,0	1/1:19,1:20:43.49:181,43,0	0/1:19,0:19:40.09:59,0,40	1/1:21,1:22:13.80:96,14,0	0/1:26,0:26:15.04:111,0,15	0/0:14,0:14:42.14:0,42,582	0/0:12,0:12:33.05:0,33,418	0/0:18,0:18:54.09:0,54,677	1/1:16,0:16:10.37:111,10,0	0/1:23,2:25:29.71:134,0,30	1/1:14,4:18:16.65:182,17,0	0/1:8,0:8:5.91:33,0,6
chr10	67328298	.	CT	C	381.80	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-0.485;DP=666;FS=16.358;HRun=8;HaplotypeScore=101.8534;InbreedingCoeff=0.9881;MQ=83.77;MQ0=0;MQRankSum=-1.577;QD=15.91;ReadPosRankSum=-3.091;VQSLOD=1.8266;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:93.16:0,93,1018	0/0:7,0:7:21.05:0,21,238	0/0:30,0:30:60.36:0,60,636	0/0:22,0:22:21.18:0,21,314	0/0:19,0:19:47.95:0,48,529	0/0:20,0:20:54.13:0,54,619	0/0:22,0:22:48.14:0,48,569	1/1:6,18:24:51.01:477,51,0	0/0:21,0:21:34.25:0,34,682	0/0:23,0:23:54.12:0,54,628	0/0:13,0:13:30.06:0,30,331	0/0:26,0:26:66.19:0,66,787	0/0:33,0:33:87.25:0,87,1031	0/0:27,0:27:72.21:0,72,860	0/0:39,0:39:99:0,105,1234	0/0:24,0:24:66.18:0,66,776	0/0:20,0:20:57.17:0,57,685	0/0:29,0:29:81.22:0,81,953	0/0:23,1:24:55.06:0,55,664	0/0:9,0:9:24.07:0,24,290	0/0:34,0:34:87.24:0,87,1026	0/0:26,0:26:78.09:0,78,884	0/0:18,0:18:48.13:0,48,559	0/0:32,0:32:96.29:0,96,1160	0/0:28,0:28:72.02:0,72,798	0/0:15,0:15:33.10:0,33,399	0/0:33,0:33:87.25:0,87,1038	0/0:12,0:12:27.06:0,27,313
chr10	67328382	.	AGC	A	23339.34	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=11.695;DP=784;FS=0.883;HRun=0;HaplotypeScore=106.0284;InbreedingCoeff=1.0000;MQ=91.40;MQ0=0;MQRankSum=-6.018;QD=45.14;ReadPosRankSum=4.448;VQSLOD=5.8920;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,129,2533	0/0:12,0:12:36.12:0,36,731	0/0:29,0:29:87.29:0,87,1685	0/0:34,0:34:93.11:0,93,1700	1/1:0,23:24:66.18:1043,66,0	1/1:0,24:24:69.24:1126,69,0	1/1:0,33:33:93.32:1517,93,0	1/1:0,35:35:99:1685,105,0	1/1:0,16:16:48.16:783,48,0	1/1:0,26:26:78.27:1273,78,0	1/1:0,16:19:48.16:773,48,0	1/1:0,41:41:99:1760,108,0	0/0:28,0:28:84.24:0,84,1563	1/1:1,34:35:99:1643,102,0	1/1:0,29:29:78.27:1273,78,0	1/1:0,26:26:75.26:1224,75,0	0/0:22,0:22:66.23:0,66,1340	1/1:0,24:24:66.23:1076,66,0	1/1:0,20:20:60.20:972,60,0	1/1:0,26:26:75.26:1224,75,0	1/1:0,30:30:78.27:1273,78,0	0/0:39,0:39:99:0,117,2268	0/0:21,0:20:63.19:0,63,1207	0/0:39,0:39:99:0,117,2358	1/1:0,25:25:63.22:1028,63,0	1/1:0,27:27:81.25:1275,81,0	1/1:0,31:32:87.30:1414,87,0	1/1:0,25:25:60.20:979,60,0
chr10	67328931	.	C	CAG	23003.06	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-16.818;DP=669;FS=4.637;HRun=0;HaplotypeScore=73.0250;InbreedingCoeff=0.9997;MQ=83.47;MQ0=1;MQRankSum=-2.069;QD=51.81;ReadPosRankSum=2.894;VQSLOD=5.6869;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:87.28:0,87,1309	0/0:8,0:8:24.08:0,24,367	0/0:23,0:23:57.16:0,57,814	0/0:15,0:15:39.13:0,39,587	1/1:2,22:24:63.22:1210,63,0	1/1:0,21:22:57.20:1101,57,0	1/1:1,14:15:39.13:753,39,0	0/0:38,0:38:99:0,111,1644	1/1:0,20:20:54.19:1043,54,0	1/1:3,24:28:81.20:1360,81,0	1/1:0,17:17:48.16:921,48,0	1/1:1,18:19:57.20:1094,57,0	0/0:28,0:28:84.29:0,84,1286	1/1:1,17:18:51.17:984,51,0	1/1:2,32:34:93.32:1776,93,0	1/1:0,36:36:96.33:1854,96,0	0/0:29,0:29:87.25:0,87,1284	1/1:1,14:14:39.13:753,39,0	1/1:2,16:19:57.18:1039,57,0	1/1:0,36:36:99:2024,105,0	1/1:1,25:26:57.20:1101,57,0	0/0:16,0:16:48.15:0,48,714	0/0:21,0:21:60.20:0,60,918	0/0:17,0:17:51.17:0,51,775	1/1:0,28:28:72.25:1391,72,0	1/1:1,32:34:96.32:1822,96,0	1/1:1,32:32:93.32:1794,93,0	1/1:0,17:19:51.17:984,51,0
chr10	67330158	.	CTTTCT	C	568.60	PASS	AB=1.000;AC=15;AF=0.375;AN=40;BaseQRankSum=3.312;DP=564;FS=5.720;HRun=0;HaplotypeScore=93.0920;InbreedingCoeff=0.6346;MQ=58.01;MQ0=14;MQRankSum=-0.360;QD=3.79;ReadPosRankSum=1.531;VQSLOD=1.0349;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	1/1:4,0:8:5.23:36,5,0	./.	./.	./.	0/0:19,0:19:18.06:0,18,401	0/0:17,0:17:7.27:0,7,96	./.	0/0:19,0:19:15.05:0,15,322	0/0:19,0:19:9:0,9,132	0/0:13,0:13:21.07:0,21,338	0/0:18,0:18:6.02:0,6,117	0/0:16,0:16:27.07:0,27,577	0/0:15,0:15:9.03:0,9,242	1/1:20,0:18:12.04:182,12,0	0/0:24,0:24:9.02:0,9,159	./.	0/1:29,0:29:36.99:37,0,189	1/1:9,6:15:9.03:154,9,0	1/1:8,3:11:3.01:52,3,0	./.	./.	0/0:8,0:8:9.03:0,9,214	0/0:24,0:24:33.11:0,33,764	0/0:15,0:15:13.29:0,13,279	1/1:26,3:29:6.02:103,6,0	1/1:16,5:21:3.01:52,3,0	1/1:17,0:17:6.02:100,6,0
chr10	67330193	.	T	TC	34.25	PASS	AB=0.667;AC=1;AF=0.019;AN=54;BaseQRankSum=1.274;DP=430;FS=2.050;HRun=1;HaplotypeScore=50.3818;InbreedingCoeff=-0.0268;MQ=54.55;MQ0=12;MQRankSum=2.250;QD=4.28;ReadPosRankSum=-2.597;VQSLOD=-0.5171;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:45.06:0,45,534	0/0:6,0:6:11.90:0,12,136	./.	0/0:12,0:3:3.01:0,3,39	0/0:14,0:14:33.11:0,33,454	0/0:18,0:18:51.17:0,51,711	0/0:12,0:12:36.11:0,36,488	0/1:4,4:7:48.04:108,0,48	0/0:19,0:19:57.18:0,57,780	0/0:25,0:24:72.23:0,72,975	0/0:15,0:15:45.14:0,45,600	0/0:18,0:18:51.14:0,51,666	0/0:17,0:17:51.16:0,51,687	0/0:13,0:13:36.11:0,36,488	0/0:23,0:20:60.15:0,60,790	0/0:23,0:23:69.20:0,69,905	0/0:15,0:15:38.98:0,39,432	0/0:19,0:18:52.39:0,52,689	0/0:16,0:11:23.88:0,24,263	0/0:11,0:11:27.02:0,27,353	0/0:11,0:11:33.09:0,33,428	0/0:8,0:8:21.07:0,21,293	0/0:7,0:7:21.07:0,21,294	0/0:22,0:22:63.20:0,63,859	0/0:14,0:14:42.12:0,42,557	0/0:26,0:26:72.53:0,73,931	0/0:22,0:22:54.10:0,54,711	0/0:14,0:13:39.02:0,39,424
chr10	67330882	.	TGTTA	T	674.64	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.240;DP=436;FS=20.450;HRun=0;HaplotypeScore=75.5237;InbreedingCoeff=0.7651;MQ=75.22;MQ0=0;MQRankSum=-4.228;QD=37.48;ReadPosRankSum=-1.130;VQSLOD=1.8011;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:39.13:0,39,1040	0/0:3,0:3:9.03:0,9,246	0/0:15,0:15:22.54:0,23,651	0/0:15,0:15:1.01:0,1,724	1/1:0,18:15:42.11:769,42,0	0/0:13,0:13:39.13:0,39,1068	0/0:16,0:16:45.14:0,45,1166	0/0:22,0:22:66.23:0,66,1799	0/0:11,0:11:30.09:0,30,754	0/0:12,0:12:36.12:0,36,987	0/0:20,0:20:54.19:0,54,1478	0/0:15,0:15:45.15:0,45,1189	0/0:11,0:11:33.10:0,33,835	0/0:10,0:10:30.09:0,30,730	0/0:17,0:17:45.15:0,45,1232	0/0:19,0:19:54.18:0,54,1405	0/0:17,0:17:48.16:0,48,1299	0/0:23,0:23:60.19:0,60,1584	0/0:21,0:21:63.21:0,63,1619	0/0:17,0:17:45.15:0,45,1232	0/0:23,0:23:63.19:0,63,1597	0/0:7,0:7:21.07:0,21,575	0/0:15,0:15:42.14:0,42,1118	0/0:20,0:20:60.21:0,60,1630	0/0:17,0:17:51.16:0,51,1310	0/0:18,0:18:51.16:0,51,1280	0/0:19,0:18:57.20:0,57,1528	0/0:7,0:7:21.07:0,21,575
chr10	67331503	.	GA	G	918.76	PASS	AB=0.917;AC=7;AF=0.125;AN=56;BaseQRankSum=7.834;DP=642;FS=0.581;HRun=9;HaplotypeScore=66.1627;InbreedingCoeff=0.8395;MQ=78.12;MQ0=0;MQRankSum=-3.468;QD=14.82;ReadPosRankSum=1.469;VQSLOD=3.8201;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,22:24:57.02:521,57,0	1/1:1,10:11:27.01:247,27,0	0/0:28,0:26:51.04:0,51,506	0/0:17,0:14:32.70:0,33,293	0/0:30,0:31:90.12:0,90,1008	0/0:27,0:26:72.19:0,72,813	0/1:10,1:11:6.39:6,0,186	0/0:44,0:44:99:0,117,1304	0/0:20,0:20:51.13:0,51,568	0/0:32,0:32:93.25:0,93,1044	0/0:26,1:27:47.76:0,48,804	0/0:15,0:15:42.12:0,42,485	0/0:24,0:24:66.18:0,66,753	0/0:24,0:24:66.20:0,66,762	0/0:23,0:23:66.17:0,66,742	0/0:21,0:20:54.16:0,54,623	1/1:3,13:16:8.80:285,9,0	0/0:25,0:25:66.14:0,66,735	0/0:20,0:20:57.17:0,57,658	0/0:34,0:36:83.07:0,83,941	0/0:17,0:17:42.12:0,42,485	0/0:17,0:21:59.51:0,60,612	0/0:22,0:22:63.19:0,63,727	0/0:6,0:6:18.05:0,18,208	0/0:30,0:30:90.26:0,90,1031	0/0:23,0:23:63.17:0,63,709	0/0:28,0:28:75.21:0,75,854	0/0:18,0:18:54.08:0,54,596
chr10	67332633	.	CTTTCT	C	1012.20	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=4.978;DP=384;FS=8.919;HRun=0;HaplotypeScore=74.8429;InbreedingCoeff=0.7919;MQ=71.92;MQ0=2;MQRankSum=-0.492;QD=19.10;ReadPosRankSum=0.350;VQSLOD=2.3818;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,15:17:12.04:251,12,0	1/1:0,5:5:8.99:145,9,0	0/0:11,0:8:10.82:0,11,169	0/1:12,0:9:7.26:7,0,75	0/0:19,0:19:32.86:0,33,716	0/0:18,0:18:48.12:0,48,1141	0/0:12,0:11:30.01:0,30,590	0/0:27,0:26:54.30:0,54,668	0/0:9,0:9:27.09:0,27,712	0/0:22,0:21:57.15:0,57,1268	0/0:9,0:9:24.07:0,24,531	0/0:11,0:11:30.08:0,30,704	0/0:6,0:6:15.05:0,15,396	0/0:7,0:7:21:0,21,522	0/0:11,0:11:30.09:0,30,748	0/0:18,0:18:51.09:0,51,1032	1/1:6,12:17:44.97:746,45,0	0/0:15,0:14:27.20:0,27,887	0/0:18,0:17:51.10:0,51,1004	0/0:22,0:22:63.11:0,63,1391	0/0:14,0:14:34.85:0,35,742	0/0:5,0:5:9.01:0,9,182	0/0:10,0:10:27.07:0,27,646	0/0:9,0:9:21.07:0,21,559	0/0:15,0:15:42.59:0,43,1027	0/0:21,0:21:48.13:0,48,1134	0/0:10,0:10:30.08:0,30,644	0/0:12,0:12:30.09:0,30,853
chr10	67332637	.	CT	C	437.28	PASS	AB=0.916;AC=12;AF=0.214;AN=56;BaseQRankSum=8.885;DP=382;FS=16.992;HRun=14;HaplotypeScore=48.8840;InbreedingCoeff=0.6637;MQ=68.18;MQ0=4;MQRankSum=-1.085;QD=4.09;ReadPosRankSum=1.418;VQSLOD=-0.0559;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:15,1:16:10.47:42,10,0	1/1:5,0:5:5.19:20,5,0	0/0:10,0:7:3:0,3,28	0/1:11,0:7:1.27:4,0,1	1/1:4,17:21:36.49:280,36,0	0/0:18,0:18:42.05:0,42,390	0/0:10,1:10:0.41:0,0,139	1/1:6,0:25:37.08:108,37,0	0/0:10,0:10:7.62:0,8,194	0/0:23,0:22:54.03:0,54,490	0/0:8,0:9:2.28:0,2,107	0/0:12,0:12:27.02:0,27,246	0/0:7,0:7:18.01:0,18,163	0/0:7,0:7:18:0,18,160	0/0:12,0:12:32.95:0,33,291	0/0:16,1:18:8.61:0,9,248	1/1:16,1:16:31.81:143,32,0	0/0:16,0:15:24.13:0,24,311	0/0:17,1:17:35.84:0,36,307	0/0:23,0:23:33.35:0,33,422	0/0:11,2:13:8.20:0,8,193	0/0:3,0:3:3:0,3,28	0/1:9,1:10:2.56:3,0,121	0/0:8,0:8:18:0,18,162	0/0:15,0:16:33.34:0,33,293	0/0:18,0:18:33.04:0,33,306	0/0:10,1:11:12.43:0,12,251	0/0:11,0:11:33.02:0,33,302
chr10	67332991	.	C	CAGTA	2675.95	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-7.390;DP=546;FS=7.418;HRun=0;HaplotypeScore=84.5716;InbreedingCoeff=0.9940;MQ=76.86;MQ0=0;MQRankSum=-6.516;QD=59.47;ReadPosRankSum=-4.057;VQSLOD=3.9607;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:51.17:0,51,937	0/0:8,0:8:24.08:0,24,447	0/0:12,0:13:32.88:0,33,521	0/0:11,0:11:27.01:0,27,395	0/0:21,0:21:63.19:0,63,1084	0/0:19,0:19:45.14:0,45,804	0/0:18,0:18:42.14:0,42,784	1/1:9,34:45:99:2771,120,0	0/0:20,0:20:57.20:0,57,1046	0/0:29,0:29:87.28:0,87,1559	0/0:15,0:14:33.10:0,33,567	0/0:14,0:14:42.14:0,42,767	0/0:20,0:20:54.19:0,54,998	0/0:16,0:16:42.13:0,42,735	0/0:32,0:32:93.24:0,93,1608	0/0:19,0:19:48.15:0,48,865	0/0:13,0:13:31.83:0,32,574	0/0:22,0:22:63.16:0,63,1074	0/0:12,0:12:30.07:0,30,492	0/0:26,0:26:72.23:0,72,1296	0/0:21,0:21:63.22:0,63,1154	0/0:12,0:12:30.06:0,30,489	0/0:22,0:22:63.19:0,63,1105	0/0:9,0:9:27.09:0,27,504	0/0:17,0:17:48.16:0,48,896	0/0:19,0:19:54.19:0,54,996	0/0:30,0:30:84.27:0,84,1492	0/0:24,0:24:66.23:0,66,1231
chr10	67335205	.	GA	G	1425.31	PASS	AB=0.975;AC=16;AF=0.296;AN=54;BaseQRankSum=8.157;DP=236;FS=12.218;HRun=11;HaplotypeScore=27.0522;InbreedingCoeff=0.5330;MQ=65.75;MQ0=4;MQRankSum=0.964;QD=11.78;ReadPosRankSum=-0.369;VQSLOD=0.9474;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,15:17:38.96:320,39,0	1/1:1,1:3:5.03:31,5,0	0/1:7,0:5:0.89:1,0,54	0/1:8,1:4:6.33:6,0,38	1/1:2,3:5:8.99:74,9,0	0/0:6,0:6:18.05:0,18,192	0/0:4,0:4:12.02:0,12,120	1/1:4,24:28:68.91:566,69,0	0/0:5,0:5:15.04:0,15,160	0/0:2,0:2:6.02:0,6,64	0/0:10,0:11:23.89:0,24,238	0/0:3,0:3:9.02:0,9,96	0/0:2,0:2:3.01:0,3,32	0/0:2,0:2:6.02:0,6,64	0/0:2,0:2:3.01:0,3,32	0/0:6,0:6:18.05:0,18,192	1/1:8,28:36:40.17:533,40,0	0/0:11,0:11:28.27:0,28,277	0/0:10,0:9:27.06:0,27,278	0/1:5,0:5:10.39:10,0,77	0/0:1,0:1:3.01:0,3,32	./.	1/1:0,2:2:5.99:49,6,0	0/0:6,0:7:17.88:0,18,174	0/0:4,0:4:9.02:0,9,96	0/0:9,0:9:27.07:0,27,288	0/1:9,0:9:3.57:4,0,171	0/0:28,0:30:71.94:0,72,715
chr10	67339899	.	A	ATCTC	268.41	PASS	AB=1.000;AC=5;AF=0.109;AN=46;BaseQRankSum=-1.433;DP=160;FS=0.000;HRun=0;HaplotypeScore=43.7642;InbreedingCoeff=0.3422;MQ=93.79;MQ0=1;MQRankSum=-2.515;QD=5.83;ReadPosRankSum=1.360;VQSLOD=1.4710;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:16,0:14:14.19:0,14,155	0/0:8,0:6:5.92:0,6,89	1/1:6,5:11:14.95:276,15,0	0/0:9,0:9:17.54:0,18,159	0/0:2,0:2:6.02:0,6,94	0/1:32,0:32:36.51:37,0,414	./.	0/0:7,0:7:14.82:0,15,137	./.	0/0:4,0:4:5.79:0,6,38	0/0:1,0:1:3.01:0,3,52	0/0:2,0:2:2.84:0,3,14	0/0:2,0:2:2.84:0,3,14	0/0:3,0:3:3.01:0,3,48	1/1:3,0:3:6.01:67,6,0	0/0:7,0:7:7.37:0,7,34	0/0:5,0:4:8.41:0,8,74	0/0:6,0:6:11.76:0,12,125	0/0:6,0:6:9.01:0,9,117	0/0:3,0:3:9.02:0,9,125	0/0:3,0:3:6.02:0,6,100	./.	0/0:13,0:13:26.42:0,26,265	0/0:6,0:6:14.94:0,15,201	0/0:2,0:2:5.85:0,6,60	0/0:5,0:5:10.89:0,11,47
chr10	67339909	.	C	CTA	1206.04	PASS	AB=0.571;AC=35;AF=0.761;AN=46;BaseQRankSum=-4.146;DP=151;FS=5.953;HRun=0;HaplotypeScore=33.1463;InbreedingCoeff=0.3251;MQ=85.07;MQ0=1;MQRankSum=-1.040;QD=11.94;ReadPosRankSum=3.685;VQSLOD=2.2431;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	1/1:11,0:9:2.29:6,2,0	0/0:8,0:5:2:0,2,6	1/1:11,0:11:2.92:8,3,0	1/1:3,6:9:9.03:146,9,0	1/1:3,0:3:3:25,3,0	0/0:31,0:31:65.79:0,66,773	./.	1/1:4,2:6:6.02:97,6,0	./.	1/1:2,0:2:3.01:48,3,0	0/0:1,0:1:3:0,3,25	1/1:2,0:2:3.01:49,3,0	1/1:0,2:2:3.01:49,3,0	1/1:2,0:2:2.94:18,3,0	1/1:1,0:3:6:53,6,0	0/1:2,5:8:27.07:88,0,27	1/1:2,2:3:6.02:95,6,0	1/1:6,0:6:6.02:95,6,0	1/1:5,0:5:3:25,3,0	0/0:3,0:3:3.01:0,3,36	0/0:3,0:3:3.01:0,3,37	./.	1/1:5,9:14:15.05:243,15,0	1/1:5,1:6:3.01:49,3,0	1/1:1,2:3:3.01:49,3,0	1/1:0,4:4:12.04:194,12,0
chr10	67339945	.	G	GTGTA	1286.65	PASS	AC=8;AF=0.167;AN=48;BaseQRankSum=-3.247;DP=136;FS=14.255;HRun=0;HaplotypeScore=30.4416;InbreedingCoeff=0.5054;MQ=55.94;MQ0=3;MQRankSum=-1.635;QD=41.50;ReadPosRankSum=-0.168;VQSLOD=1.5603;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/0:1,0:1:0:0,0,0	0/0:4,0:1:3.01:0,3,44	./.	./.	0/0:9,0:9:21.07:0,21,390	0/0:4,0:4:12.04:0,12,223	1/1:2,23:28:80.95:1375,81,0	./.	0/0:3,0:3:6.01:0,6,80	0/0:2,0:2:3.01:0,3,50	0/0:2,0:3:9.03:0,9,134	1/1:0,0:1:2.04:6,2,0	0/0:5,0:5:9.01:0,9,143	0/0:4,0:4:9.02:0,9,144	0/0:3,0:3:9.03:0,9,177	0/0:3,0:3:3.46:0,3,24	0/0:8,0:7:12.01:0,12,167	0/0:8,0:6:18.02:0,18,316	0/0:2,0:2:6.02:0,6,120	0/0:2,0:2:6.02:0,6,120	1/1:0,0:1:2.04:6,2,0	0/0:2,0:2:6.01:0,6,85	1/1:0,0:1:2.04:6,2,0	0/0:8,0:8:18.05:0,18,302	0/0:7,0:7:18.02:0,18,303	0/0:5,0:6:12.04:0,12,239	0/0:7,0:7:14.23:0,14,304
chr10	67343100	.	T	TA	1896.74	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=-6.536;DP=417;FS=3.984;HRun=8;HaplotypeScore=40.0247;InbreedingCoeff=0.8218;MQ=62.32;MQ0=1;MQRankSum=-1.311;QD=21.07;ReadPosRankSum=0.096;VQSLOD=3.0953;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,16:21:39.12:450,39,0	1/1:4,12:16:14.55:404,15,0	0/0:16,0:13:11.95:0,12,109	0/1:7,0:4:8.94:17,0,9	0/0:27,0:27:77.82:0,78,709	0/0:8,0:8:24.01:0,24,220	0/0:6,0:6:15.01:0,15,137	1/1:2,19:21:54.12:600,54,0	0/0:9,0:9:18:0,18,165	0/0:24,0:25:62.06:0,62,552	0/0:12,0:12:27.01:0,27,247	0/0:10,0:10:24.01:0,24,219	0/0:9,0:9:18:0,18,161	0/0:13,0:13:33.02:0,33,302	0/0:15,0:15:30.01:0,30,275	0/0:14,0:14:36.02:0,36,329	1/1:3,21:24:51.15:589,51,0	0/0:13,0:13:36.02:0,36,329	0/0:19,0:19:44.99:0,45,405	0/0:19,0:19:56.96:0,57,506	0/0:9,0:9:9:0,9,82	0/0:3,0:3:6:0,6,55	0/0:10,0:10:26.98:0,27,235	0/0:6,0:6:12.01:0,12,110	0/0:19,0:19:51.01:0,51,467	0/0:27,1:28:42.43:0,42,616	0/0:20,0:20:51:0,51,459	0/0:16,0:16:45.02:0,45,412
chr10	67343183	.	AGGCTCTG	A	743.89	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.490;DP=353;FS=4.575;HRun=0;HaplotypeScore=83.8655;InbreedingCoeff=0.8794;MQ=56.90;MQ0=3;MQRankSum=-5.517;QD=46.49;ReadPosRankSum=-1.962;VQSLOD=2.5920;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:54.17:0,54,1967	0/0:4,0:4:12.04:0,12,411	0/0:7,0:6:15.05:0,15,524	0/0:14,0:10:30.03:0,30,956	0/0:30,0:30:66.23:0,66,2551	0/0:8,0:8:15.94:0,16,565	0/0:11,0:11:33.11:0,33,1248	1/1:0,16:13:36.08:839,36,0	0/0:9,0:9:24.07:0,24,872	0/0:17,0:17:51.16:0,51,1798	0/0:13,0:12:30.10:0,30,1151	0/0:9,0:9:21.07:0,21,777	0/0:10,0:10:27.09:0,27,1089	0/0:5,0:5:15.05:0,15,571	0/0:10,0:10:27.09:0,27,1049	0/0:14,0:14:32.83:0,33,1207	0/0:15,0:15:33.11:0,33,1286	0/0:14,0:14:39.13:0,39,1374	0/0:13,0:12:36.12:0,36,1202	0/0:16,0:15:45.08:0,45,1503	0/0:6,0:6:12.04:0,12,404	0/0:7,0:7:21.07:0,21,834	0/0:15,0:15:42.14:0,42,1640	0/0:7,0:7:15.03:0,15,508	0/0:13,0:13:36.11:0,36,1258	0/0:21,0:21:63.22:0,63,2381	0/0:15,0:15:36.12:0,36,1414	0/0:16,0:14:42.14:0,42,1637
chr10	67343218	.	AAAAAAAAAAAAAAAGAAAG	A	307.27	PASS	AC=2;AF=0.037;AN=54;BaseQRankSum=5.325;DP=353;FS=4.074;HRun=0;HaplotypeScore=149.4199;InbreedingCoeff=0.6923;MQ=44.23;MQ0=29;MQRankSum=3.817;QD=9.91;ReadPosRankSum=-0.786;VQSLOD=2.0502;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:16:4.62:0,5,1560	0/0:5,0:5:12.04:0,12,418	./.	0/0:3,0:1:0:0,0,0	1/1:4,27:31:35.31:401,35,0	0/0:9,0:8:15.05:0,15,299	0/0:14,0:14:39.13:0,39,777	0/0:17,0:16:34.79:0,35,336	0/0:9,0:8:24.06:0,24,497	0/0:11,0:11:24.01:0,24,346	0/0:14,0:11:33.11:0,33,610	0/0:8,0:4:12.04:0,12,224	0/0:12,0:11:30.09:0,30,669	0/0:5,0:5:12.03:0,12,179	0/0:14,0:14:42.12:0,42,790	0/0:11,0:9:24.07:0,24,418	0/0:21,0:16:37.35:0,37,1157	0/0:18,0:14:35.07:0,35,474	0/0:12,0:11:33.11:0,33,618	0/0:14,0:12:27.08:0,27,552	0/0:6,0:5:13.58:0,14,186	0/0:5,0:4:6.02:0,6,139	0/0:17,0:15:42.13:0,42,1368	0/0:10,0:10:24.55:0,25,685	0/0:16,0:13:29.36:0,29,603	0/0:18,0:17:43.92:0,44,677	0/0:18,0:14:27.08:0,27,605	0/0:15,0:14:39.05:0,39,638
chr10	67343554	.	G	GGA	1061.36	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=1.979;DP=313;FS=5.193;HRun=0;HaplotypeScore=82.3731;InbreedingCoeff=0.3574;MQ=88.14;MQ0=2;MQRankSum=-0.844;QD=30.32;ReadPosRankSum=3.043;VQSLOD=5.2119;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,102,1363	0/0:4,0:4:12.03:0,12,158	0/0:25,0:18:24.11:0,24,257	0/0:28,0:22:12.89:0,13,250	1/1:26,9:35:78.12:1154,78,0	0/0:4,0:4:5.96:0,6,45	0/0:18,0:17:29.98:0,30,277	0/0:10,0:10:17.20:0,17,134	0/0:9,0:9:13.06:0,13,124	0/0:6,0:6:6.02:0,6,91	0/0:9,0:9:3.01:0,3,42	0/0:11,0:11:12.46:0,12,104	0/0:3,0:3:6.44:0,6,46	0/0:11,0:11:8.87:0,9,70	0/0:10,0:10:15.65:0,16,130	0/0:5,0:5:5.99:0,6,51	0/0:16,0:16:48.13:0,48,687	0/0:7,0:7:9.88:0,10,94	0/0:3,0:3:9.02:0,9,117	0/0:6,0:6:3:0,3,26	0/0:13,0:11:17.38:0,17,149	0/0:4,0:4:9:0,9,79	0/0:6,0:6:5.96:0,6,47	0/0:10,0:10:6.25:0,6,57	0/0:9,0:9:3:0,3,26	0/0:2,0:2:3:0,3,27	0/0:12,0:12:23.99:0,24,240	0/0:2,0:2:0:0,0,0
chr10	67343555	.	G	GA	560.91	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.640;DP=322;FS=0.000;HRun=0;HaplotypeScore=77.9125;InbreedingCoeff=0.5055;MQ=89.95;MQ0=2;MQRankSum=-0.444;QD=16.50;ReadPosRankSum=4.288;VQSLOD=5.9046;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,105,1282	0/0:4,0:4:12.03:0,12,145	0/0:27,0:19:20.14:0,20,241	0/0:29,0:23:26.03:0,26,322	1/1:8,26:34:62.75:655,63,0	0/0:4,0:4:5.97:0,6,45	0/0:17,0:16:44.91:0,45,381	0/0:11,0:11:16.79:0,17,132	0/0:9,0:9:19.53:0,20,174	0/0:6,0:6:9.02:0,9,107	0/0:10,0:10:11.97:0,12,111	0/0:12,0:12:30.92:0,31,254	0/0:3,0:3:6.44:0,6,47	0/0:12,0:12:17.95:0,18,154	0/0:10,0:10:22.77:0,23,176	0/0:5,0:5:12:0,12,104	0/0:16,0:16:48.13:0,48,629	0/0:8,0:8:13.80:0,14,113	0/0:3,0:3:9.02:0,9,109	0/0:8,0:8:2.99:0,3,26	0/0:13,0:11:16.90:0,17,152	0/0:4,0:4:12:0,12,107	0/0:6,0:6:8.95:0,9,70	0/0:10,0:10:12.87:0,13,102	0/0:10,0:10:11.96:0,12,97	0/0:3,0:3:3:0,3,27	0/0:11,0:11:27.02:0,27,268	0/0:2,0:2:0:0,0,0
chr10	67343561	.	G	GT	550.83	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.555;DP=315;FS=5.275;HRun=0;HaplotypeScore=50.7171;InbreedingCoeff=0.5465;MQ=93.12;MQ0=2;MQRankSum=0.091;QD=16.20;ReadPosRankSum=3.723;VQSLOD=5.6391;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:47.42:0,47,425	0/0:3,0:3:8.83:0,9,67	0/0:26,0:18:7.62:0,8,310	0/0:29,0:23:34.81:0,35,359	1/1:10,24:34:71.01:645,71,0	0/0:6,0:6:14.80:0,15,117	0/0:17,0:16:47.81:0,48,397	0/0:9,0:9:14.94:0,15,122	0/0:9,0:9:21.87:0,22,204	0/0:9,0:9:18.03:0,18,181	0/0:13,0:13:29.78:0,30,253	0/0:11,0:11:31.20:0,31,257	0/0:4,0:4:10.52:0,11,74	0/0:12,0:12:26.95:0,27,235	0/0:7,0:7:17.86:0,18,136	0/0:4,0:4:12:0,12,106	0/0:15,0:15:19.01:0,19,167	0/0:8,0:8:20.90:0,21,173	0/0:5,0:5:12:0,12,132	0/0:7,0:7:13.21:0,13,99	0/0:12,0:10:24.86:0,25,203	0/0:4,0:4:9:0,9,81	0/0:6,0:6:14.92:0,15,114	0/0:9,0:9:15.54:0,16,128	0/0:10,0:10:26.86:0,27,215	0/0:1,0:1:3:0,3,27	0/0:8,0:8:21.02:0,21,217	0/0:2,0:2:3:0,3,26
chr10	67344393	.	G	GAGCTC	6690.95	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-10.163;DP=758;FS=7.777;HRun=0;HaplotypeScore=133.8029;InbreedingCoeff=0.9997;MQ=89.03;MQ0=0;MQRankSum=-6.366;QD=67.59;ReadPosRankSum=2.330;VQSLOD=6.3050;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,43:52:99:3499,114,0	1/1:1,11:12:36.12:1072,36,0	0/0:30,0:30:38.90:0,39,1570	0/0:27,0:27:69.12:0,69,1299	0/0:25,0:25:54.13:0,54,1010	0/0:26,0:26:75.26:0,75,1555	0/0:34,0:34:93.30:0,93,1856	0/0:35,0:35:86.65:0,87,1685	0/0:30,0:30:84.29:0,84,1698	0/0:27,0:27:72.24:0,72,1458	0/0:17,0:17:45.15:0,45,933	0/0:22,0:22:57.20:0,57,1172	0/0:27,0:27:75.26:0,75,1540	0/0:33,0:33:93.32:0,93,1878	0/0:44,0:44:99:0,120,2474	0/0:32,0:32:87.30:0,87,1762	1/1:4,30:35:69.03:2120,69,0	0/0:21,0:21:54.18:0,54,1081	0/0:29,0:29:81.27:0,81,1645	0/0:16,0:16:45.14:0,45,895	0/0:30,0:30:84.29:0,84,1725	0/0:14,0:14:42.13:0,42,820	0/0:15,0:15:45.14:0,45,895	0/0:23,0:23:66.23:0,66,1352	0/0:29,0:29:84.29:0,84,1741	0/0:34,0:34:99:0,102,2033	0/0:28,0:28:81.26:0,81,1627	0/0:11,0:11:30.10:0,30,617
chr10	67345957	.	TC	T	3036.35	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=13.308;DP=749;FS=3.258;HRun=1;HaplotypeScore=76.6434;InbreedingCoeff=0.9997;MQ=76.89;MQ0=0;MQRankSum=-1.482;QD=38.93;ReadPosRankSum=-3.155;VQSLOD=3.0008;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,105,1658	0/0:10,0:10:30.10:0,30,480	0/0:24,0:23:69.22:0,69,1044	0/0:15,0:15:44.18:0,44,636	1/1:0,30:30:87.20:1170,87,0	0/0:33,0:33:99:0,99,1583	0/0:14,0:14:42.14:0,42,651	1/1:0,48:48:99:1988,144,0	0/0:30,0:30:90.31:0,90,1429	0/0:31,0:31:90.25:0,90,1361	0/0:27,0:27:81.28:0,81,1286	0/0:32,0:32:96.33:0,96,1525	0/0:30,0:30:90.31:0,90,1429	0/0:25,0:25:75.26:0,75,1189	0/0:28,0:28:84.26:0,84,1296	0/0:33,0:33:99:0,99,1573	0/0:27,0:27:81.28:0,81,1295	0/0:19,0:19:54.17:0,54,839	0/0:29,0:29:87.30:0,87,1369	0/0:30,0:30:90.31:0,90,1429	0/0:24,0:24:69.23:0,69,1094	0/0:22,0:22:63.21:0,63,1006	0/0:25,0:25:75.24:0,75,1165	0/0:24,0:24:69.21:0,69,1078	0/0:22,0:22:66.22:0,66,1035	0/0:27,0:27:81.28:0,81,1296	0/0:30,0:30:90.31:0,90,1428	0/0:23,0:23:69.23:0,69,1082
chr10	67346847	.	GA	G	1340.59	PASS	AB=0.895;AC=9;AF=0.161;AN=56;BaseQRankSum=7.125;DP=487;FS=0.472;HRun=11;HaplotypeScore=47.6150;InbreedingCoeff=0.8124;MQ=59.58;MQ0=2;MQRankSum=0.204;QD=11.27;ReadPosRankSum=0.895;VQSLOD=2.6050;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,28:37:64.93:523,65,0	1/1:0,6:6:17.98:148,18,0	0/1:15,2:6:7.40:7,0,77	0/0:14,0:6:11.86:0,12,109	0/0:28,1:31:52.69:0,53,723	0/0:19,1:20:51.13:0,51,544	0/0:13,1:14:14.24:0,14,340	1/1:11,27:38:76.46:602,76,0	0/0:10,0:10:27.05:0,27,279	0/0:22,0:22:37.47:0,37,548	0/0:24,0:24:60.07:0,60,615	0/0:4,0:4:12.03:0,12,128	0/0:12,0:12:30.02:0,30,298	0/0:11,0:11:30.08:0,30,320	0/0:14,0:14:39.10:0,39,415	0/0:10,1:11:8.42:0,8,286	1/1:5,15:20:26.95:222,27,0	0/0:14,0:14:17.27:0,17,326	0/0:21,0:21:25.68:0,26,433	0/0:27,0:27:44.98:0,45,642	0/0:9,0:9:15.04:0,15,159	0/0:10,0:10:30.08:0,30,319	0/0:18,1:19:25.97:0,26,479	0/0:7,0:7:9.02:0,9,96	0/0:20,0:21:53.96:0,54,551	0/0:12,0:12:8.49:0,8,294	0/0:29,1:33:47.87:0,48,677	0/0:7,0:7:14.86:0,15,134
chr10	67347882	.	A	ACTTAGGGTAGATTGTCTTG	2794.12	PASS	AB=0.675;AC=36;AF=0.947;AN=38;BaseQRankSum=-2.470;DP=49;FS=24.976;HRun=0;HaplotypeScore=31.5798;InbreedingCoeff=-0.2067;MQ=122.71;MQ0=0;MQRankSum=-2.666;QD=62.09;ReadPosRankSum=0.367;VQSLOD=1.3472;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/1:2,0:6:26.11:384,0,26	0/1:4,1:6:71.52:338,0,72	1/1:2,0:3:6.01:100,6,0	1/1:3,0:3:6.02:109,6,0	1/1:2,0:2:6.02:108,6,0	1/1:1,0:1:3.01:81,3,0	1/1:1,0:1:3.01:49,3,0	1/1:0,0:1:3.01:109,3,0	./.	1/1:1,0:1:3.01:50,3,0	1/1:1,0:2:6.02:300,6,0	./.	1/1:2,0:2:3.01:75,3,0	./.	./.	./.	1/1:0,0:2:6.02:228,6,0	1/1:1,0:2:6.02:195,6,0	1/1:3,0:6:9.03:278,9,0	1/1:0,0:1:3.01:121,3,0	1/1:2,0:2:3.01:50,3,0	1/1:0,0:1:3.01:114,3,0	./.	1/1:1,0:2:6.01:151,6,0	1/1:1,0:1:3.01:45,3,0	./.
chr10	67349303	.	A	ACTCC	1415.69	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-3.957;DP=582;FS=1.502;HRun=0;HaplotypeScore=97.3711;InbreedingCoeff=0.9963;MQ=66.78;MQ0=1;MQRankSum=-6.623;QD=35.39;ReadPosRankSum=-6.287;VQSLOD=2.2682;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:90.30:0,90,1496	0/0:9,0:9:27.09:0,27,456	0/0:19,0:15:31.64:0,32,437	0/0:20,0:13:28.56:0,29,373	0/0:25,0:25:66.20:0,66,1106	0/0:16,0:16:36.10:0,36,558	0/0:28,0:27:44.58:0,45,974	1/1:29,11:40:87.27:1511,87,0	0/0:18,0:18:45.10:0,45,716	0/0:31,0:31:69.22:0,69,1143	0/0:11,0:11:30.03:0,30,456	0/0:20,0:20:57.19:0,57,959	0/0:21,0:21:48.12:0,48,750	0/0:14,0:14:33.11:0,33,570	0/0:28,0:28:78.22:0,78,1238	0/0:19,0:19:48.16:0,48,806	0/0:27,0:27:63.16:0,63,1024	0/0:23,0:23:63.22:0,63,1071	0/0:14,0:14:36.12:0,36,620	0/0:17,0:17:48.11:0,48,770	0/0:17,0:16:48.13:0,48,751	0/0:18,0:18:51.12:0,51,800	0/0:13,0:13:30.09:0,30,491	0/0:15,0:15:42.11:0,42,646	0/0:23,0:23:63.17:0,63,1031	0/0:18,0:18:51.17:0,51,879	0/0:24,0:24:63.19:0,63,1035	0/0:16,0:16:45.13:0,45,748
chr10	67349490	.	TG	T	787.96	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.738;DP=649;FS=1.763;HRun=1;HaplotypeScore=68.2022;InbreedingCoeff=0.9988;MQ=82.43;MQ0=0;MQRankSum=-3.683;QD=35.82;ReadPosRankSum=-4.567;VQSLOD=2.1671;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,129,2031	0/0:9,0:9:27.09:0,27,432	0/0:19,0:18:50.74:0,51,735	0/0:24,0:23:52.64:0,53,807	0/0:38,0:38:99:0,114,1814	0/0:22,0:22:66.22:0,66,1034	0/0:34,0:34:87.29:0,87,1382	1/1:3,19:22:66.19:883,66,0	0/0:13,0:13:39.13:0,39,624	0/0:26,0:26:78.27:0,78,1236	0/0:30,0:30:90.31:0,90,1437	0/0:17,0:17:51.17:0,51,801	0/0:18,0:18:51.17:0,51,813	0/0:19,0:19:51.16:0,51,792	0/0:18,0:18:54.18:0,54,854	0/0:16,0:16:48.16:0,48,767	0/0:47,0:47:99:0,138,2159	0/0:24,0:24:66.22:0,66,1047	0/0:15,0:15:45.15:0,45,713	0/0:24,0:24:72.21:0,72,1104	0/0:19,0:19:57.18:0,57,886	0/0:19,0:19:57.19:0,57,911	0/0:24,0:24:69.23:0,69,1091	0/0:34,0:34:93.32:0,93,1481	0/0:13,0:13:39.10:0,39,561	0/0:25,0:25:75.26:0,75,1191	0/0:15,0:15:45.15:0,45,709	0/0:21,0:21:63.21:0,63,1007
chr10	67349515	.	CT	C	327.98	PASS	AB=0.896;AC=4;AF=0.071;AN=56;BaseQRankSum=6.537;DP=646;FS=4.199;HRun=11;HaplotypeScore=77.8162;InbreedingCoeff=0.4059;MQ=65.76;MQ0=5;MQRankSum=-1.617;QD=6.31;ReadPosRankSum=-2.196;VQSLOD=1.8166;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:48,2:49:50.01:0,50,1121	0/0:8,0:8:18.05:0,18,192	0/0:10,0:8:5.74:0,6,47	0/0:15,0:11:6.63:0,7,125	0/0:31,0:31:57.13:0,57,600	0/0:22,0:22:63.16:0,63,672	0/0:33,2:36:50.29:0,50,696	1/1:12,15:26:51.55:417,52,0	0/1:10,1:11:2.39:2,0,154	0/0:30,1:30:44.54:0,45,666	0/0:23,0:23:54.13:0,54,574	0/0:20,0:20:48.09:0,48,497	0/0:18,1:19:23.10:0,23,396	0/0:15,0:15:39.10:0,39,415	0/0:15,0:15:23.80:0,24,236	0/1:11,2:14:13.75:14,0,249	0/0:46,1:45:80.62:0,81,1063	0/0:29,1:29:41.49:0,41,635	0/0:18,2:20:1.67:0,2,412	0/0:26,0:26:63.03:0,63,644	0/0:14,0:14:29.99:0,30,296	0/0:17,0:17:39.10:0,39,416	0/0:21,0:23:48.59:0,49,464	0/0:37,2:39:30.89:0,31,703	0/0:16,0:16:27.07:0,27,288	0/0:25,0:25:63.08:0,63,643	0/0:18,0:17:37.30:0,37,374	0/0:23,0:23:66.13:0,66,690
chr10	67350494	.	CAT	C	1029.38	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.938;DP=403;FS=6.148;HRun=0;HaplotypeScore=53.0162;InbreedingCoeff=0.8254;MQ=70.88;MQ0=0;MQRankSum=0.233;QD=35.50;ReadPosRankSum=-5.075;VQSLOD=3.6072;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:51.17:0,51,954	0/0:7,0:7:18.06:0,18,337	0/0:9,0:9:22.99:0,23,286	0/0:7,0:8:18.06:0,18,306	0/0:22,0:22:63.22:0,63,1165	0/0:17,0:17:51.17:0,51,955	0/0:7,0:7:21.07:0,21,393	1/1:1,28:29:84.21:1124,84,0	0/0:11,0:11:33.10:0,33,586	0/0:21,0:21:63.21:0,63,1151	0/0:15,0:15:45.15:0,45,842	0/0:11,0:11:27.09:0,27,505	0/0:13,0:13:36.09:0,36,609	0/0:9,0:9:27.09:0,27,498	0/0:13,0:13:36.12:0,36,664	0/0:14,0:14:42.14:0,42,786	0/0:16,0:16:45.15:0,45,833	0/0:26,0:26:75.24:0,75,1370	0/0:21,0:21:57.16:0,57,973	0/0:10,0:10:30.10:0,30,559	0/0:10,0:10:27.09:0,27,506	0/0:6,0:6:18.05:0,18,306	0/0:12,0:12:33.09:0,33,555	0/0:1,0:1:3.01:0,3,56	0/0:21,0:21:63.22:0,63,1180	0/0:21,0:21:60.21:0,60,1124	0/0:25,0:25:75.23:0,75,1325	0/0:11,0:11:33.11:0,33,618
chr10	67350612	.	TA	T	489.10	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.877;DP=519;FS=3.640;HRun=2;HaplotypeScore=48.0674;InbreedingCoeff=0.9937;MQ=73.55;MQ0=0;MQRankSum=-0.160;QD=24.45;ReadPosRankSum=0.960;VQSLOD=3.4078;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:66.21:0,66,966	0/0:12,0:12:36.12:0,36,539	0/0:16,0:16:30.48:0,30,599	0/0:8,0:8:21.02:0,21,285	1/1:0,20:20:45.15:584,45,0	0/0:24,0:24:72.24:0,72,1078	0/0:14,0:14:42.14:0,42,629	0/0:38,0:38:99:0,114,1654	0/0:15,0:15:45.15:0,45,669	0/0:26,0:26:75.25:0,75,1124	0/0:24,0:24:69.22:0,69,1015	0/0:13,0:13:36.11:0,36,521	0/0:15,0:15:45.14:0,45,654	0/0:20,0:20:57.18:0,57,833	0/0:20,0:20:60.18:0,60,877	0/0:19,0:19:57.19:0,57,854	0/0:19,0:19:57.19:0,57,854	0/0:29,0:28:81.25:0,81,1191	0/0:18,0:18:54.18:0,54,806	0/0:14,0:14:42.14:0,42,628	0/0:9,0:9:27.09:0,27,404	0/0:11,0:11:33.10:0,33,476	0/0:19,0:19:54.18:0,54,809	0/0:13,0:13:39.12:0,39,564	0/0:18,0:18:54.17:0,54,788	0/0:30,0:30:87.28:0,87,1268	0/0:20,0:20:60.20:0,60,894	0/0:12,0:12:36.12:0,36,539
chr10	67352322	.	TCAC	T	417.06	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.885;DP=520;FS=8.840;HRun=0;HaplotypeScore=77.2841;InbreedingCoeff=0.9855;MQ=60.16;MQ0=8;MQRankSum=2.512;QD=24.53;ReadPosRankSum=0.434;VQSLOD=3.0275;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:83.59:0,84,1310	0/0:6,0:6:18.04:0,18,287	0/0:27,0:15:38.15:0,38,513	0/0:33,0:19:50.87:0,51,658	1/1:0,17:17:33.04:512,33,0	0/0:18,0:18:48.07:0,48,852	0/0:21,0:21:54.08:0,54,959	0/0:22,0:22:25.82:0,26,345	0/0:11,0:11:33.02:0,33,537	0/0:17,0:17:48.03:0,48,787	0/0:12,0:12:36.08:0,36,626	0/0:17,0:17:45.51:0,46,700	0/0:19,0:19:38.24:0,38,955	0/0:18,0:17:48.07:0,48,945	0/0:17,0:17:45.05:0,45,863	0/0:16,0:16:45.13:0,45,875	0/0:14,0:14:38.94:0,39,600	0/0:7,0:7:21.03:0,21,389	0/0:22,0:22:66.03:0,66,934	0/0:18,0:18:47.99:0,48,856	0/0:21,0:21:60.14:0,60,1075	0/0:22,0:22:63.17:0,63,1228	0/0:18,0:18:48.12:0,48,890	0/0:11,0:11:33.09:0,33,631	0/0:22,0:22:63.17:0,63,1142	0/0:19,0:18:48.13:0,48,881	0/0:25,0:25:72.13:0,72,1325	0/0:21,0:21:63.18:0,63,1203
chr10	67352325	.	CCATCAT	C	307.31	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.351;DP=525;FS=8.677;HRun=0;HaplotypeScore=108.6989;InbreedingCoeff=0.9703;MQ=60.04;MQ0=10;MQRankSum=3.861;QD=7.88;ReadPosRankSum=-0.556;VQSLOD=1.4360;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:57.17:0,57,1622	0/0:6,0:6:12.04:0,12,353	0/0:27,0:15:17.99:0,18,299	0/0:33,0:19:39.04:0,39,674	1/1:17,0:17:28.96:143,29,0	0/0:19,0:19:42.13:0,42,1079	0/0:20,0:20:48.15:0,48,1333	1/1:15,7:22:16.45:283,16,0	0/0:12,0:12:30.10:0,30,802	0/0:16,0:16:39.13:0,39,1048	0/0:13,0:12:30.10:0,30,844	0/0:17,0:17:36.11:0,36,849	0/0:19,0:19:54.12:0,54,1448	0/0:18,0:17:45.14:0,45,1347	0/0:16,0:16:42.13:0,42,1221	0/0:15,0:15:36.12:0,36,1107	0/0:14,0:14:26.70:0,27,722	0/0:8,0:8:21.04:0,21,587	0/0:24,0:23:48.10:0,48,1146	0/0:19,0:19:45.03:0,45,1095	0/0:21,0:21:48.15:0,48,1315	0/0:22,0:22:60.21:0,60,1654	0/0:19,0:19:48.09:0,48,1290	0/0:11,0:11:30.08:0,30,820	0/0:23,0:23:57.20:0,57,1512	0/0:19,0:18:42.14:0,42,1250	0/0:24,0:24:63.22:0,63,1739	0/0:21,0:21:63.22:0,63,1693
chr10	67352941	.	AAAAGAAAAAAG	A	165.18	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.423;DP=550;FS=8.354;HRun=0;HaplotypeScore=148.3238;InbreedingCoeff=0.9153;MQ=59.13;MQ0=17;MQRankSum=2.847;QD=6.61;ReadPosRankSum=-2.445;VQSLOD=1.7141;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:45.69:0,46,710	0/0:7,0:7:18.03:0,18,286	0/0:34,0:13:24.37:0,24,495	0/0:32,0:13:33.75:0,34,555	1/1:12,13:23:17.74:255,18,0	0/0:22,0:22:57.09:0,57,1863	0/0:14,0:14:39.13:0,39,1127	0/0:21,0:21:14.07:0,14,162	0/0:10,0:10:27.56:0,28,702	0/0:34,0:31:69.71:0,70,1673	0/0:28,0:26:60.60:0,61,1719	0/0:18,0:18:39.13:0,39,1121	0/0:16,0:15:36.12:0,36,1041	0/0:12,0:11:33.11:0,33,1190	0/0:14,0:12:32.96:0,33,930	0/0:18,0:18:51.14:0,51,1253	0/0:22,0:20:39.39:0,39,754	0/0:18,0:18:45.62:0,46,1506	0/0:18,0:16:39.10:0,39,989	0/0:17,0:15:36.12:0,36,919	0/0:8,0:8:14.98:0,15,400	0/0:17,0:17:45.07:0,45,1123	0/0:20,0:20:39.08:0,39,1068	0/0:16,0:14:23.44:0,23,924	0/0:18,0:17:27.09:0,27,735	0/0:27,0:26:49.70:0,50,1279	0/0:28,0:25:48.16:0,48,1731	0/0:5,0:5:11.98:0,12,367
chr10	67353100	.	A	ACACCCGAGTC	12196.24	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-1.048;DP=636;FS=1.902;HRun=0;HaplotypeScore=183.3290;InbreedingCoeff=0.9924;MQ=72.69;MQ0=0;MQRankSum=-11.604;QD=96.80;ReadPosRankSum=-3.762;VQSLOD=3.8841;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,17:31:48.16:2328,48,0	1/1:2,3:6:12.04:561,12,0	0/0:14,0:14:35.14:0,35,843	0/0:27,0:27:72.22:0,72,1941	1/1:8,14:23:36.08:1755,36,0	0/0:24,0:24:69.22:0,69,2157	0/0:26,0:26:78.25:0,78,2340	1/1:29,12:47:99:5479,132,0	0/0:22,0:22:63.20:0,63,1921	0/0:31,0:31:93.32:0,93,2765	0/0:14,0:14:39.13:0,39,1286	0/0:26,0:26:72.25:0,72,2240	0/0:18,0:18:42.14:0,42,1365	0/0:21,0:21:60.21:0,60,1810	0/0:26,0:26:72.25:0,72,2237	0/0:33,0:33:96.33:0,96,3049	1/1:7,9:18:42.14:2073,42,0	0/0:22,0:22:57.17:0,57,1745	0/0:20,0:20:54.19:0,54,1723	0/0:16,0:16:48.16:0,48,1540	0/0:27,0:27:75.23:0,75,2336	0/0:16,0:16:42.14:0,42,1380	0/0:22,0:22:63.22:0,63,1992	0/0:23,0:23:66.18:0,66,2076	0/0:13,0:13:39.06:0,39,1112	0/0:33,0:33:90.31:0,90,2702	0/0:26,0:25:72.25:0,72,2294	0/0:10,0:10:27.09:0,27,890
chr10	67353907	.	AG	A	517.01	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.141;DP=791;FS=0.000;HRun=4;HaplotypeScore=75.2789;InbreedingCoeff=0.9979;MQ=86.57;MQ0=0;MQRankSum=-2.320;QD=27.21;ReadPosRankSum=-2.059;VQSLOD=2.1316;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,147,2055	0/0:8,0:8:24.08:0,24,335	0/0:30,0:30:81.08:0,81,1031	0/0:24,0:24:63.18:0,63,832	0/0:40,0:39:99:0,120,1648	0/0:21,0:21:60.19:0,60,824	0/0:29,0:29:87.28:0,87,1201	1/1:1,18:19:51.16:612,51,0	0/0:29,0:29:87.26:0,87,1181	0/0:24,0:24:72.23:0,72,978	0/0:23,0:23:66.22:0,66,922	0/0:29,0:29:87.28:0,87,1200	0/0:32,0:32:90.30:0,90,1259	0/0:33,0:33:96.31:0,96,1328	0/0:38,0:38:99:0,111,1533	0/0:31,0:31:90.29:0,90,1232	0/0:29,0:29:81.27:0,81,1132	0/0:23,0:23:69.21:0,69,943	0/0:22,0:22:54.18:0,54,754	0/0:38,0:38:99:0,105,1462	0/0:48,0:48:99:0,144,2012	0/0:24,0:24:69.22:0,69,949	0/0:30,0:30:84.75:0,85,1176	0/0:26,0:26:75.24:0,75,1028	0/0:16,0:16:42.14:0,42,588	0/0:28,0:28:78.25:0,78,1077	0/0:30,0:30:87.29:0,87,1215	0/0:16,0:16:44.69:0,45,575
chr10	67354011	.	ACT	A	839.48	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.023;DP=841;FS=0.000;HRun=0;HaplotypeScore=100.1917;InbreedingCoeff=0.9999;MQ=83.79;MQ0=0;MQRankSum=0.425;QD=36.50;ReadPosRankSum=-3.947;VQSLOD=4.5149;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,129,2381	0/0:20,0:20:60.08:0,60,1043	0/0:25,0:25:69.16:0,69,1107	0/0:31,0:31:77.84:0,78,1231	0/0:31,0:31:90.31:0,90,1684	0/0:22,0:22:60.15:0,60,997	0/0:32,0:32:90.26:0,90,1584	1/1:0,23:23:69.18:934,69,0	0/0:31,0:31:90.29:0,90,1636	0/0:30,0:30:90.31:0,90,1677	0/0:20,0:20:60.19:0,60,1086	0/0:32,0:32:96.32:0,96,1758	0/0:30,0:30:87.28:0,87,1595	0/0:37,0:37:99:0,108,1890	0/0:41,0:41:99:0,117,2190	0/0:39,0:39:99:0,114,2096	0/0:28,0:28:81.28:0,81,1516	0/0:15,0:15:39.13:0,39,730	0/0:29,0:29:78.23:0,78,1397	0/0:29,0:29:84.25:0,84,1480	0/0:71,0:71:99:0,208,3830	0/0:26,0:26:78.25:0,78,1416	0/0:29,0:29:87.28:0,87,1594	0/0:33,0:33:99:0,99,1843	0/0:16,0:16:45.13:0,45,782	0/0:32,0:32:96.32:0,96,1741	0/0:28,0:28:81.25:0,81,1453	0/0:16,0:16:45.11:0,45,737
chr10	67354848	.	GA	G	619.93	PASS	AB=0.884;AC=8;AF=0.143;AN=56;BaseQRankSum=7.383;DP=607;FS=6.038;HRun=11;HaplotypeScore=78.0894;InbreedingCoeff=0.4153;MQ=69.91;MQ0=3;MQRankSum=-0.427;QD=4.88;ReadPosRankSum=-0.290;VQSLOD=1.5371;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,116,1196	0/0:11,0:11:18.05:0,18,192	0/0:33,0:17:20.89:0,21,134	0/0:24,0:15:15.81:0,16,121	1/1:4,24:29:73.71:575,74,0	0/0:18,0:18:48.01:0,48,488	0/0:19,0:19:43.16:0,43,422	1/1:7,1:34:25.50:141,26,0	0/0:15,0:15:42.09:0,42,440	0/0:23,0:23:42.33:0,42,538	0/0:18,0:18:47.41:0,47,450	0/0:20,0:20:50.95:0,51,518	0/0:13,1:14:8.42:0,8,280	0/0:15,0:15:39.10:0,39,416	0/0:26,1:27:41.51:0,42,638	0/0:24,2:26:16.86:0,17,576	0/1:15,2:17:7.18:7,0,334	0/0:12,1:13:8.44:0,8,295	0/1:31,3:33:17.32:17,0,628	0/1:4,1:5:12.61:13,0,84	0/0:23,1:24:35.37:0,35,565	0/0:14,0:14:36.08:0,36,377	0/0:22,0:22:20.55:0,21,478	0/0:32,1:33:59.53:0,60,826	0/0:19,0:19:49.01:0,49,514	0/0:20,1:21:25.66:0,26,439	0/0:28,0:28:72.14:0,72,747	0/1:7,1:8:9.93:10,0,168
chr10	67355629	.	C	CCTT	763.45	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-5.880;DP=581;FS=6.067;HRun=0;HaplotypeScore=83.9250;InbreedingCoeff=0.9809;MQ=87.09;MQ0=0;MQRankSum=-1.950;QD=34.70;ReadPosRankSum=-4.154;VQSLOD=2.6654;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:59,0:59:99:0,156,2357	0/0:6,0:6:15.05:0,15,230	0/0:16,0:15:42.14:0,42,640	0/0:32,0:32:70.23:0,70,1086	0/0:18,0:18:48.16:0,48,736	0/0:23,0:23:60.14:0,60,892	0/0:33,0:33:93.25:0,93,1357	1/1:5,17:22:53.92:858,54,0	0/0:16,0:16:39.10:0,39,555	0/0:17,0:17:45.14:0,45,671	0/0:13,0:13:30.10:0,30,460	0/0:13,0:13:36.12:0,36,551	0/0:19,0:19:51.17:0,51,782	0/0:17,0:17:45.15:0,45,689	0/0:25,0:25:63.21:0,63,966	0/0:27,0:27:66.22:0,66,1012	0/0:22,0:22:63.19:0,63,939	0/0:25,0:25:60.04:0,60,858	0/0:14,0:14:36.10:0,36,525	0/0:17,0:17:51.17:0,51,779	0/0:31,0:31:81.14:0,81,1165	0/0:9,0:9:24.05:0,24,305	0/0:12,0:12:33.11:0,33,497	0/0:26,0:26:72.24:0,72,1104	0/0:21,0:21:48.16:0,48,736	0/0:17,0:17:48.15:0,48,693	0/0:18,0:18:54.16:0,54,786	0/0:13,0:13:30.05:0,30,433
chr10	67357302	.	GCA	G	572.93	PASS	AB=0.899;AC=19;AF=0.365;AN=52;BaseQRankSum=6.890;DP=537;FS=1.271;HRun=0;HaplotypeScore=85.0687;InbreedingCoeff=-0.3466;MQ=56.79;MQ0=11;MQRankSum=0.865;QD=1.76;ReadPosRankSum=0.994;VQSLOD=1.4812;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:6.83:0,7,45	0/1:8,0:8:0.02:0,0,0	./.	./.	1/1:9,0:24:19.23:89,19,0	0/0:19,2:21:29.45:0,29,385	0/1:18,1:20:17.18:17,0,291	0/0:28,0:27:32.67:0,33,244	0/1:22,5:27:75.46:75,0,618	0/1:25,1:26:53.15:53,0,225	0/1:24,3:27:66.34:66,0,310	0/0:15,0:14:20.43:0,20,380	0/0:19,0:19:27.09:0,27,405	0/1:9,1:11:26.21:26,0,205	0/1:12,1:15:3.31:3,0,282	0/1:16,2:18:33.20:33,0,341	0/0:7,0:17:9.34:0,9,70	0/1:14,2:17:56.48:56,0,198	0/1:9,1:10:27.77:28,0,34	0/1:17,3:22:14.19:14,0,350	0/1:20,2:21:15.49:15,0,192	0/1:17,1:20:55.68:56,0,198	0/0:20,2:22:8.74:0,9,494	0/1:8,3:11:75.41:75,0,202	0/1:14,1:16:6.07:6,0,315	0/0:21,0:21:19.82:0,20,383	0/1:24,1:26:85.88:86,0,209	0/1:4,0:4:23.71:24,0,80
chr10	67357955	.	TGGTG	T	217.20	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=1.312;DP=418;FS=23.065;HRun=0;HaplotypeScore=85.4513;InbreedingCoeff=0.7595;MQ=84.95;MQ0=0;MQRankSum=0.658;QD=16.71;ReadPosRankSum=0.242;VQSLOD=1.5897;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:56.09:0,56,542	0/0:8,0:8:20.97:0,21,237	0/0:17,0:17:47.60:0,48,701	0/0:20,0:20:26.03:0,26,321	0/0:16,0:16:30.93:0,31,224	0/0:18,0:18:36.02:0,36,420	0/0:26,0:26:56.60:0,57,639	1/1:3,9:13:24:310,24,0	0/0:13,0:13:6.58:0,7,249	0/0:9,0:9:17.96:0,18,174	0/0:8,0:8:12.01:0,12,127	0/0:13,0:13:29.94:0,30,313	0/0:11,0:11:12.02:0,12,192	0/0:16,0:16:23.93:0,24,241	0/0:22,0:22:51.04:0,51,537	0/0:22,0:21:41.93:0,42,425	0/0:18,0:18:42.02:0,42,486	0/0:13,0:13:29.71:0,30,351	0/0:15,0:15:27.05:0,27,322	0/0:6,0:6:17.90:0,18,280	0/0:14,0:14:24.02:0,24,389	0/0:14,0:14:20.86:0,21,225	0/0:11,0:11:23.77:0,24,313	0/0:16,0:16:36.03:0,36,558	0/0:12,0:12:23.98:0,24,233	0/0:14,0:14:18.35:0,18,221	0/0:23,0:23:47.99:0,48,706	0/0:3,0:3:5.91:0,6,55
chr10	67357958	.	TG	T	2157.59	PASS	AB=0.890;AC=40;AF=0.714;AN=56;BaseQRankSum=0.309;DP=365;FS=4.543;HRun=12;HaplotypeScore=53.4683;InbreedingCoeff=0.2881;MQ=86.62;MQ0=0;MQRankSum=-1.904;QD=6.81;ReadPosRankSum=3.910;VQSLOD=1.8059;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:13,10:23:25.90:194,26,0	1/1:4,5:9:14.93:116,15,0	0/0:19,0:19:11.35:0,11,168	0/1:16,1:18:17.72:18,0,67	1/1:3,0:13:20.37:59,20,0	1/1:4,9:14:25.92:191,26,0	1/1:5,14:21:47.95:343,48,0	1/1:12,0:12:9.67:33,10,0	1/1:4,7:12:16.98:122,17,0	1/1:4,2:6:5.97:46,6,0	1/1:3,3:6:5.92:46,6,0	1/1:9,5:14:20.88:162,21,0	0/0:9,0:9:9.01:0,9,83	1/1:5,3:10:10.03:58,10,0	1/1:11,11:22:29.59:215,30,0	1/1:9,8:16:14.91:116,15,0	1/1:3,9:13:28.93:215,29,0	1/1:3,6:10:21.99:151,22,0	0/1:10,2:12:14.21:14,0,51	0/0:8,0:8:9.90:0,10,93	0/0:12,0:12:14.99:0,15,133	0/1:7,3:10:18.65:58,0,19	0/1:10,0:10:7.57:8,0,96	0/1:12,1:13:2.21:2,0,155	1/1:5,7:12:11.95:93,12,0	0/1:11,2:13:20.04:40,0,20	0/1:20,2:22:19.43:19,0,180	0/1:4,1:5:17.70:18,0,35
chr10	67359564	.	T	TA	20950.43	PASS	AC=52;AF=0.963;AN=54;BaseQRankSum=0.126;DP=543;FS=0.000;HRun=3;HaplotypeScore=399.7844;InbreedingCoeff=0.6973;MQ=31.77;MQ0=0;MQRankSum=-1.732;QD=38.65;ReadPosRankSum=0.738;VQSLOD=2.2379;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,13:16:30.10:439,30,0	1/1:2,7:9:21.07:314,21,0	./.	0/0:1,0:1:2.22:0,2,7	1/1:6,17:24:48.15:672,48,0	1/1:3,22:25:66.22:965,66,0	1/1:2,10:12:33.07:469,33,0	1/1:4,28:32:90.30:1346,90,0	1/1:1,22:23:69.19:996,69,0	1/1:6,17:23:57.19:844,57,0	1/1:4,20:24:63.17:892,63,0	1/1:2,30:32:90.30:1344,90,0	1/1:4,19:23:66.18:924,66,0	1/1:5,18:23:57.19:838,57,0	1/1:4,22:26:72.20:1036,72,0	1/1:0,16:16:48.16:708,48,0	1/1:6,7:13:27.05:370,27,0	1/1:3,12:15:36.12:529,36,0	1/1:1,17:18:54.14:783,54,0	1/1:3,35:38:99:1585,111,0	1/1:1,6:7:12.04:179,12,0	1/1:1,14:15:39.09:550,39,0	1/1:1,16:17:48.16:696,48,0	1/1:0,8:8:12.04:179,12,0	1/1:2,25:27:75.21:1096,75,0	1/1:2,29:31:93.31:1373,93,0	1/1:3,28:31:87.29:1293,87,0	1/1:2,12:13:36.12:529,36,0
chr10	67359619	.	A	AT	19036.68	PASS	AB=0.889;AC=53;AF=0.946;AN=56;BaseQRankSum=0.633;DP=562;FS=6.274;HRun=2;HaplotypeScore=372.1365;InbreedingCoeff=0.6158;MQ=51.57;MQ0=0;MQRankSum=-5.919;QD=34.36;ReadPosRankSum=2.688;VQSLOD=2.5672;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,9:11:27.09:372,27,0	1/1:1,10:11:30.10:429,30,0	0/1:7,1:8:22.19:22,0,168	0/0:8,0:8:16.23:0,16,142	1/1:4,24:28:56.98:729,57,0	1/1:3,35:38:99:1392,105,0	1/1:2,10:12:33.01:412,33,0	1/1:7,20:27:66.14:902,66,0	1/1:1,20:21:60.10:806,60,0	1/1:3,28:31:81.27:1161,81,0	1/1:1,27:28:72.16:979,72,0	1/1:4,14:18:42.14:600,42,0	1/1:1,22:24:66.15:900,66,0	1/1:3,18:21:57.18:799,57,0	1/1:6,18:24:51.16:711,51,0	1/1:1,21:22:63.09:823,63,0	1/1:3,16:19:39.05:508,39,0	1/1:2,11:13:33.11:471,33,0	1/1:5,11:16:36.08:493,36,0	1/1:3,29:32:84.10:1124,84,0	1/1:0,5:5:14.84:119,15,0	1/1:1,22:23:66.22:943,66,0	1/1:2,22:24:66.13:878,66,0	1/1:2,5:7:12.03:172,12,0	1/1:3,24:27:71.98:932,72,0	1/1:6,25:31:75.25:1075,75,0	1/1:1,25:26:69.23:986,69,0	1/1:0,7:7:21.07:297,21,0
chr10	67360897	.	A	AGT	614.36	PASS	AC=14;AF=0.280;AN=50;BaseQRankSum=-0.115;DP=665;FS=49.184;HRun=0;HaplotypeScore=94.7813;InbreedingCoeff=0.6683;MQ=66.12;MQ0=15;MQRankSum=-1.500;QD=3.70;ReadPosRankSum=-0.275;VQSLOD=0.4502;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:30:12.03:146,12,0	1/1:11,1:13:17.97:166,18,0	./.	./.	0/0:17,0:27:5.44:0,5,24	0/0:32,0:30:8.98:0,9,88	0/0:19,0:21:8.86:0,9,81	1/1:31,0:29:14.99:141,15,0	1/1:15,7:22:6.02:88,6,0	0/0:21,0:19:2.50:0,3,31	0/0:17,0:18:11.82:0,12,109	0/0:23,0:23:6.01:0,6,64	0/0:22,0:22:11.98:0,12,128	1/1:22,0:22:8.99:75,9,0	0/0:29,0:28:9.12:0,9,75	0/0:19,0:20:11.97:0,12,128	1/1:18,3:27:14.94:157,15,0	0/0:21,0:23:13.42:0,13,138	1/1:19,0:18:0.47:1,0,0	0/0:21,0:20:9.02:0,9,96	0/0:29,0:29:8.61:0,9,74	0/0:25,0:25:15.04:0,15,160	0/0:16,0:17:6.31:0,6,47	0/0:22,0:23:8.14:0,8,94	0/0:17,0:19:8.52:0,9,72	0/0:22,0:22:6.01:0,6,64	./.	0/0:21,0:21:0.07:0,0,182
chr10	67362400	.	A	AT	1992.38	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-2.201;DP=525;FS=0.000;HRun=5;HaplotypeScore=50.2451;InbreedingCoeff=0.9681;MQ=74.00;MQ0=0;MQRankSum=-0.491;QD=32.14;ReadPosRankSum=-2.980;VQSLOD=2.8012;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:72.18:0,72,774	0/0:6,0:6:18.05:0,18,193	0/0:9,0:8:22.60:0,23,224	0/0:12,0:11:9.66:0,10,158	1/1:1,23:24:66.21:868,66,0	0/0:29,0:29:81.16:0,81,853	0/0:10,0:10:27.07:0,27,290	1/1:5,33:38:99:1246,99,0	0/0:18,0:18:51.08:0,51,523	0/0:29,0:29:84.21:0,84,899	0/0:24,0:24:71.55:0,72,749	0/0:17,0:17:51.11:0,51,540	0/0:14,0:14:39.08:0,39,410	0/0:20,0:20:57.13:0,57,604	0/0:20,0:20:57.13:0,57,604	0/0:13,0:13:36.06:0,36,371	0/0:18,0:18:54.09:0,54,561	0/0:17,0:17:45.07:0,45,471	0/0:16,0:16:42.09:0,42,438	0/0:35,0:35:96.24:0,96,1030	0/0:12,0:12:33.08:0,33,355	0/0:12,0:12:36.09:0,36,387	0/0:20,0:20:57.14:0,57,613	0/0:21,0:21:54.13:0,54,580	0/0:17,0:17:48.10:0,48,506	0/0:20,0:20:51.13:0,51,548	0/0:16,0:16:48.12:0,48,516	0/0:14,0:14:42.11:0,42,451
chr10	67363118	.	GACGGTAATT	G	1282.33	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.067;DP=619;FS=0.000;HRun=0;HaplotypeScore=163.8772;InbreedingCoeff=0.9919;MQ=87.89;MQ0=0;MQRankSum=-4.479;QD=53.43;ReadPosRankSum=-3.105;VQSLOD=2.5198;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:93.32:0,93,4386	0/0:20,0:20:57.16:0,57,2504	0/0:21,0:21:63.14:0,63,2612	0/0:23,0:23:63.65:0,64,2682	0/0:22,0:22:63.22:0,63,2948	0/0:30,0:30:90.30:0,90,4057	0/0:26,0:26:78.27:0,78,3712	1/1:5,19:24:57.09:1377,57,0	0/0:13,0:13:36.12:0,36,1765	0/0:22,0:22:63.22:0,63,2975	0/0:17,0:17:45.15:0,45,2126	0/0:16,0:16:48.16:0,48,2308	0/0:24,0:24:69.22:0,69,3059	0/0:27,0:27:81.23:0,81,3558	0/0:30,0:30:87.30:0,87,4108	0/0:21,0:21:60.21:0,60,2919	0/0:28,0:28:78.27:0,78,3677	0/0:18,0:18:51.14:0,51,2186	0/0:14,0:14:39.13:0,39,1727	0/0:30,0:30:87.28:0,87,3934	0/0:27,0:27:78.27:0,78,3700	0/0:19,0:19:54.19:0,54,2462	0/0:25,0:25:75.26:0,75,3576	0/0:25,0:25:72.25:0,72,3529	0/0:20,0:20:60.21:0,60,2899	0/0:24,0:24:72.25:0,72,3474	0/0:16,0:16:48.16:0,48,2251	0/0:6,0:6:18.06:0,18,830
chr10	67363921	.	GCCTTTCT	G	1282.81	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=7.106;DP=630;FS=4.117;HRun=0;HaplotypeScore=145.2786;InbreedingCoeff=0.8696;MQ=69.66;MQ0=4;MQRankSum=-6.146;QD=17.82;ReadPosRankSum=-1.659;VQSLOD=2.6792;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:18,12:28:27.09:616,27,0	1/1:2,5:7:12.04:275,12,0	0/0:17,0:16:7.27:0,7,223	0/0:23,0:21:0.60:0,1,486	0/0:15,0:19:31.35:0,31,758	0/0:16,0:16:16.28:0,16,454	0/0:39,0:39:72.25:0,72,2431	1/1:11,2:12:6.02:126,6,0	0/0:29,0:29:57.15:0,57,2017	0/0:28,0:28:60.20:0,60,2055	0/0:13,0:13:30.10:0,30,1061	0/0:34,0:34:63.22:0,63,2236	0/0:21,0:21:39.13:0,39,1372	0/0:27,0:27:42.14:0,42,1411	0/0:19,0:19:27.09:0,27,998	0/0:21,0:21:30.09:0,30,897	1/1:15,7:21:18.06:413,18,0	0/0:18,0:18:37.37:0,37,1286	0/0:23,0:23:33.11:0,33,1176	0/0:21,0:21:48.16:0,48,1756	0/0:36,0:36:78.27:0,78,2700	0/0:17,0:17:39.13:0,39,1359	0/0:22,0:22:45.15:0,45,1570	0/0:27,0:27:51.18:0,51,1854	0/0:17,0:17:33.11:0,33,1190	0/0:22,0:22:48.16:0,48,1560	0/0:28,0:28:48.15:0,48,1687	0/0:21,0:21:39.13:0,39,1393
chr10	67364037	.	C	CT	1503.42	PASS	AB=0.947;AC=7;AF=0.125;AN=56;BaseQRankSum=-3.652;DP=607;FS=0.511;HRun=10;HaplotypeScore=67.0868;InbreedingCoeff=0.7753;MQ=64.20;MQ0=0;MQRankSum=-0.880;QD=16.34;ReadPosRankSum=1.659;VQSLOD=4.2066;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,21:26:53.80:539,54,0	1/1:2,10:11:27.07:288,27,0	0/0:20,0:16:1.18:0,1,71	0/1:17,1:11:17.07:17,0,31	0/0:14,0:14:26.93:0,27,221	0/0:20,0:20:41.92:0,42,342	0/0:23,0:23:56.90:0,57,468	0/0:17,0:17:38.91:0,39,318	0/0:22,0:23:52.92:0,53,425	0/0:22,0:22:59.89:0,60,487	0/0:10,0:10:17.93:0,18,148	0/0:23,0:23:62.91:0,63,517	0/0:20,0:21:46.95:0,47,375	0/0:33,0:33:43.88:0,44,517	0/0:32,0:32:71.82:0,72,583	0/0:22,0:22:56.91:0,57,468	1/1:3,33:36:56.60:807,57,0	0/0:19,0:19:44.90:0,45,369	0/0:28,0:30:65.92:0,66,496	0/0:10,0:10:29.95:0,30,243	0/0:28,0:28:59.88:0,60,493	0/0:18,0:18:38.92:0,39,320	0/0:12,0:13:28.99:0,29,227	0/0:39,0:39:99:0,104,837	0/0:19,0:19:47.92:0,48,391	0/0:21,0:21:47.91:0,48,391	0/0:27,1:28:39.88:0,40,527	0/0:9,0:9:17.98:0,18,148
chr10	67364315	.	ATG	A	302.01	PASS	AB=0.935;AC=12;AF=0.240;AN=50;BaseQRankSum=3.790;DP=686;FS=7.273;HRun=0;HaplotypeScore=117.5331;InbreedingCoeff=-0.1886;MQ=47.62;MQ0=17;MQRankSum=1.855;QD=1.04;ReadPosRankSum=-0.022;VQSLOD=1.3269;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:37:8.97:0,9,71	0/0:6,0:6:0.47:0,0,1	./.	./.	0/0:12,0:12:9.03:0,9,122	0/0:17,0:18:13.35:0,13,208	0/0:36,1:36:0.84:0,1,400	./.	0/1:18,2:20:23.72:24,0,62	0/1:28,1:29:36.26:36,0,267	0/0:13,0:13:6.02:0,6,82	0/0:24,0:24:11.52:0,12,120	0/0:26,0:26:11.45:0,11,323	0/1:26,1:27:58.44:58,0,74	0/0:25,0:24:6:0,6,89	0/1:25,0:23:14.89:15,0,144	1/1:39,0:34:6.26:38,6,0	0/1:31,0:26:17.53:18,0,359	0/0:14,0:13:5.38:0,5,43	0/0:25,0:23:12.51:0,13,153	0/0:31,0:28:8.53:0,9,266	0/0:24,0:25:18.78:0,19,247	0/1:12,0:12:17.50:18,0,17	0/1:25,4:28:30.02:30,0,364	0/1:16,2:18:76.93:77,0,127	0/1:25,5:29:76.02:76,0,131	0/1:25,3:28:50.41:50,0,98	0/0:11,0:7:9.03:0,9,133
chr10	67364660	.	CCA	C	319.78	PASS	AB=0.922;AC=15;AF=0.268;AN=56;BaseQRankSum=4.417;DP=593;FS=2.542;HRun=0;HaplotypeScore=90.2983;InbreedingCoeff=-0.2312;MQ=58.45;MQ0=5;MQRankSum=5.112;QD=1.12;ReadPosRankSum=2.057;VQSLOD=1.4869;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:9.47:0,9,91	0/0:12,0:12:8.51:0,9,94	0/0:26,0:13:0:0,0,0	0/0:40,0:18:0:0,0,0	1/1:9,0:9:3.39:17,3,0	0/1:22,3:24:6.70:7,0,329	0/0:24,0:24:11.66:0,12,467	0/0:29,0:29:29.18:0,29,187	0/0:20,0:20:15.77:0,16,308	0/0:23,0:23:45.08:0,45,653	0/0:17,0:17:28.90:0,29,399	0/1:28,3:31:22.40:22,0,539	0/1:14,1:15:45.84:46,0,183	0/1:19,2:20:6.69:7,0,330	0/1:32,0:32:47.62:48,0,403	0/1:20,2:22:40.48:40,0,288	0/0:10,0:9:9.62:0,10,63	0/1:16,3:15:74.37:74,0,237	0/0:10,0:9:3.01:0,3,46	0/1:17,1:18:6.76:7,0,307	0/1:29,2:31:16.53:17,0,583	0/1:12,2:15:99:122,0,107	0/0:16,0:16:14.75:0,15,207	0/0:37,1:37:0.56:0,1,889	0/1:21,0:21:22.89:23,0,369	0/1:16,0:16:18.61:19,0,212	0/0:19,0:17:9.36:0,9,463	0/1:8,2:10:15.72:16,0,205
chr10	67366079	.	A	AAATT	6223.11	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-9.656;DP=626;FS=3.816;HRun=0;HaplotypeScore=95.0033;InbreedingCoeff=0.9926;MQ=78.04;MQ0=0;MQRankSum=-4.892;QD=58.16;ReadPosRankSum=-3.056;VQSLOD=5.5863;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,23:24:57.11:1368,57,0	1/1:0,6:6:12.04:314,12,0	0/0:18,0:18:45.13:0,45,761	0/0:10,0:10:30.10:0,30,504	1/1:2,20:23:60.16:1497,60,0	0/0:38,0:38:99:0,102,1764	0/0:19,0:19:48.15:0,48,843	1/1:7,25:34:87.17:1793,87,0	0/0:22,0:22:63.22:0,63,1145	0/0:35,0:35:93.31:0,93,1656	0/0:23,0:23:69.24:0,69,1255	0/0:22,0:22:63.22:0,63,1146	0/0:24,0:24:72.23:0,72,1278	0/0:23,0:23:57.20:0,57,1037	0/0:17,0:17:42.14:0,42,757	0/0:24,0:24:69.21:0,69,1186	1/1:2,18:19:51.15:1252,51,0	0/0:15,0:15:42.10:0,42,729	0/0:24,0:24:69.20:0,69,1143	0/0:27,0:27:69.21:0,69,1185	0/0:21,0:21:60.18:0,60,1059	0/0:15,0:15:42.12:0,42,707	0/0:21,0:21:54.17:0,54,953	0/0:16,0:16:45.15:0,45,818	0/0:23,0:23:69.24:0,69,1243	0/0:39,0:39:99:0,114,1887	0/0:32,0:32:93.27:0,93,1618	0/0:11,0:11:33.11:0,33,572
chr10	67366150	.	A	ATTT	1103.22	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-1.169;DP=568;FS=4.817;HRun=10;HaplotypeScore=87.3394;InbreedingCoeff=0.7168;MQ=73.84;MQ0=3;MQRankSum=-3.218;QD=34.48;ReadPosRankSum=-4.188;VQSLOD=2.4332;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:15:41.94:0,42,444	0/0:4,0:4:9.03:0,9,109	0/0:25,0:19:39.02:0,39,463	0/0:26,0:20:6.11:0,6,297	0/0:29,0:30:81.15:0,81,954	0/0:23,0:23:54.11:0,54,649	0/0:15,0:15:39.10:0,39,474	1/1:12,17:32:72.20:1198,72,0	0/0:13,0:13:27.08:0,27,328	0/0:25,0:25:66.17:0,66,801	0/0:19,0:19:57.16:0,57,681	0/0:23,0:24:66.11:0,66,783	0/0:23,0:23:57.13:0,57,679	0/0:14,0:15:37.37:0,37,451	0/0:20,0:20:54.15:0,54,657	0/0:18,0:18:42.08:0,42,510	0/0:25,0:25:66.11:0,66,759	0/0:15,0:15:32.99:0,33,433	0/0:14,0:14:1.94:0,2,315	0/0:34,0:35:93.20:0,93,1100	0/0:17,0:17:33.03:0,33,400	0/0:14,0:14:30.02:0,30,365	0/0:20,0:20:51.09:0,51,620	0/0:6,0:6:15.04:0,15,182	0/0:18,0:19:46.47:0,46,569	0/0:24,0:24:69.20:0,69,828	0/0:40,0:40:99:0,117,1410	0/0:11,0:11:24.01:0,24,291
chr10	67367017	.	CT	C	722.64	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.963;DP=710;FS=15.844;HRun=2;HaplotypeScore=68.1422;InbreedingCoeff=0.9960;MQ=84.00;MQ0=0;MQRankSum=-0.608;QD=31.42;ReadPosRankSum=0.509;VQSLOD=1.9265;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,144,2138	0/0:16,0:16:48.16:0,48,719	0/0:27,0:27:75.25:0,75,1116	0/0:18,0:18:49:0,49,691	1/1:0,23:23:63.20:818,63,0	0/0:24,0:24:69.23:0,69,1034	0/0:28,0:28:84.27:0,84,1232	0/0:35,0:35:99:0,99,1449	0/0:23,0:23:66.22:0,66,989	0/0:27,0:27:81.26:0,81,1168	0/0:18,0:18:54.17:0,54,785	0/0:25,0:25:72.24:0,72,1061	0/0:25,0:25:75.25:0,75,1123	0/0:23,0:23:69.23:0,69,1034	0/0:32,0:32:93.32:0,93,1394	0/0:22,0:22:66.21:0,66,965	0/0:26,0:26:78.24:0,78,1128	0/0:17,0:16:51.14:0,51,740	0/0:23,0:23:66.21:0,66,968	0/0:29,0:29:84.28:0,84,1259	0/0:40,0:40:99:0,120,1799	0/0:26,0:26:75.25:0,75,1119	0/0:18,0:18:54.16:0,54,786	0/0:29,0:29:87.29:0,87,1304	0/0:23,0:23:69.23:0,69,1016	0/0:34,0:34:99:0,99,1479	0/0:24,0:24:72.23:0,72,1058	0/0:7,0:7:21.07:0,21,315
chr10	67367652	.	GGT	G	6284.20	PASS	AB=0.781;AC=34;AF=0.607;AN=56;BaseQRankSum=3.794;DP=688;FS=1.464;HRun=0;HaplotypeScore=109.0074;InbreedingCoeff=0.5097;MQ=60.84;MQ0=9;MQRankSum=3.081;QD=13.12;ReadPosRankSum=2.880;VQSLOD=4.5001;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:26:11.89:0,12,86	0/0:9,0:8:6.01:0,6,67	0/0:23,0:12:5.98:0,6,63	0/0:24,0:14:8.70:0,9,103	0/0:27,0:40:23.27:0,23,206	1/1:11,22:34:50.98:559,51,0	0/1:6,6:14:61.50:184,0,62	0/0:25,0:25:36.11:0,36,502	1/1:2,11:14:26.91:286,27,0	0/1:14,12:29:24.85:399,0,25	1/1:12,16:28:41.95:457,42,0	1/1:13,14:29:53.81:564,54,0	0/1:19,3:22:30.83:31,0,369	1/1:6,15:20:21.06:239,21,0	1/1:5,12:19:41.78:437,42,0	1/1:5,14:19:24.07:273,24,0	0/0:21,0:26:17.88:0,18,166	0/1:16,7:24:9.99:203,0,10	1/1:12,7:19:21.06:237,21,0	1/1:11,17:28:41.84:412,42,0	1/1:15,15:29:27.08:307,27,0	0/1:18,3:21:57.29:57,0,483	0/1:24,3:26:12.19:12,0,657	0/0:33,2:35:23.07:0,23,748	1/1:9,11:23:29.45:260,29,0	1/1:10,20:31:59.92:623,60,0	1/1:11,13:23:41.78:424,42,0	1/1:7,12:19:29.92:321,30,0
chr10	67370255	.	G	GGT	5380.38	PASS	AB=1.000;AC=31;AF=0.554;AN=56;BaseQRankSum=-16.076;DP=549;FS=7.162;HRun=0;HaplotypeScore=113.1641;InbreedingCoeff=-0.4945;MQ=71.39;MQ0=0;MQRankSum=1.427;QD=10.59;ReadPosRankSum=-13.063;VQSLOD=-0.0225;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:6,27:33:13.03:754,13,0	1/1:0,4:4:12.04:232,12,0	0/1:17,0:14:51.01:192,0,51	0/1:22,0:22:2.60:319,0,3	0/1:24,0:24:7.53:263,0,8	0/1:21,0:21:3.39:3,0,54	0/1:19,0:19:10.52:219,0,11	1/1:27,0:27:6.85:391,7,0	0/1:23,0:23:37.40:85,0,37	0/1:15,0:15:8.06:151,0,8	0/0:16,0:16:18.66:0,19,53	0/1:24,0:24:28.92:99,0,29	0/1:18,0:18:42.93:43,0,45	0/1:23,0:23:20.09:175,0,20	0/1:17,0:17:14.53:135,0,15	0/0:25,0:25:0.65:0,1,60	1/1:2,20:24:50.76:937,51,0	1/1:13,0:13:3.54:200,4,0	0/1:17,0:17:7.52:201,0,8	0/1:26,0:26:36.98:109,0,37	0/1:22,0:22:19.58:185,0,20	0/1:16,0:16:11.51:67,0,12	0/1:16,0:16:12.04:98,0,12	0/1:22,0:22:29.58:91,0,30	0/1:20,0:20:23.77:156,0,24	0/1:15,0:15:17.42:93,0,17	0/1:25,0:25:29.69:154,0,30	0/1:5,0:5:8.41:28,0,8
chr10	67371267	.	TTTTG	T	949.73	PASS	AB=0.960;AC=7;AF=0.125;AN=56;BaseQRankSum=7.999;DP=582;FS=1.507;HRun=0;HaplotypeScore=96.6047;InbreedingCoeff=0.4878;MQ=64.21;MQ0=3;MQRankSum=0.619;QD=8.19;ReadPosRankSum=-0.667;VQSLOD=2.6489;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:36.07:0,36,687	0/0:4,0:4:9.03:0,9,215	0/0:15,0:13:18.05:0,18,354	0/0:25,0:21:21.07:0,21,397	1/1:10,20:30:57.19:905,57,0	0/0:24,0:23:45.15:0,45,1064	0/0:20,0:20:36.12:0,36,820	1/1:22,0:36:21.49:153,21,0	0/0:15,0:15:33.11:0,33,780	0/0:26,0:26:48.16:0,48,1110	0/0:19,0:19:42.14:0,42,1002	0/0:24,0:24:54.17:0,54,1235	0/1:17,0:17:4.97:5,0,834	0/0:11,0:11:21.07:0,21,480	0/0:22,1:23:0.50:0,1,989	0/0:20,0:19:39.13:0,39,931	0/0:30,0:30:57.19:0,57,1307	0/0:23,0:24:44.43:0,44,910	0/0:14,0:14:12.04:0,12,287	0/0:26,0:26:54.02:0,54,1200	0/1:13,1:14:14.55:15,0,673	0/0:10,0:10:21.07:0,21,502	0/0:23,0:23:30.10:0,30,667	0/0:8,0:8:18.06:0,18,385	0/0:14,0:14:24.08:0,24,529	0/0:31,0:31:57.19:0,57,1325	0/0:41,0:41:90.31:0,90,2125	0/1:17,1:18:5.51:6,0,865
chr10	67371723	.	A	AATAT	1834.76	PASS	AB=0.958;AC=10;AF=0.200;AN=50;BaseQRankSum=-4.417;DP=228;FS=3.441;HRun=0;HaplotypeScore=48.4366;InbreedingCoeff=0.4177;MQ=68.00;MQ0=2;MQRankSum=0.872;QD=19.11;ReadPosRankSum=-2.732;VQSLOD=2.7348;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,1:4:3.01:53,3,0	1/1:1,1:2:3.01:71,3,0	./.	0/0:7,0:4:2.80:0,3,13	0/0:11,0:11:21.06:0,21,313	0/0:16,0:16:27.22:0,27,191	./.	1/1:41,0:41:57.51:1251,58,0	0/0:7,0:6:8.64:0,9,111	0/0:6,0:6:9:0,9,97	0/0:7,0:7:11.77:0,12,104	./.	0/0:7,0:7:12.04:0,12,204	0/0:6,0:6:8.86:0,9,58	0/0:6,0:6:14.93:0,15,135	0/0:2,0:2:5.97:0,6,45	1/1:4,9:13:21.07:493,21,0	0/1:20,2:21:99:99,0,345	0/1:14,0:14:7.49:7,0,190	0/0:6,0:6:3:0,3,25	0/0:2,0:2:5.99:0,6,63	0/0:2,0:2:6.02:0,6,102	0/0:2,0:2:3:0,3,25	0/0:1,0:1:3.01:0,3,51	0/0:8,0:8:11.98:0,12,141	0/0:3,0:3:5.89:0,6,38	0/0:7,0:7:17.84:0,18,148	0/0:22,0:21:10.71:0,11,227
chr10	67371739	.	C	CAT	3737.78	PASS	AB=0.771;AC=34;AF=0.630;AN=54;BaseQRankSum=-4.898;DP=217;FS=0.000;HRun=0;HaplotypeScore=33.1442;InbreedingCoeff=0.1992;MQ=71.03;MQ0=5;MQRankSum=-3.334;QD=21.24;ReadPosRankSum=2.118;VQSLOD=3.4761;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,1:2:3.01:41,3,0	1/1:1,1:2:6.02:92,6,0	0/1:4,0:2:0:0,0,0	0/0:13,0:8:5.95:0,6,43	0/0:11,0:12:29.91:0,30,333	1/1:2,11:13:24.08:394,24,0	1/1:1,0:1:3.01:46,3,0	0/1:40,0:40:17:443,0,17	0/1:8,1:8:17.87:161,0,18	1/1:1,3:4:8.52:108,9,0	0/1:2,2:4:62.32:86,0,62	1/1:0,2:2:3.01:49,3,0	0/0:5,0:5:15.05:0,15,186	1/1:0,6:6:9.03:148,9,0	1/1:2,3:5:9.03:148,9,0	1/1:1,1:2:3.01:49,3,0	0/1:10,3:13:7.96:162,0,8	0/1:9,14:22:8.13:541,0,8	0/1:2,9:11:7.09:394,0,7	./.	1/1:1,1:2:3.01:49,3,0	0/0:3,0:3:9.03:0,9,111	0/0:2,0:2:3.01:0,3,37	0/0:1,0:1:3.01:0,3,37	0/1:3,5:8:62.02:86,0,62	1/1:1,3:4:9.03:144,9,0	1/1:1,7:8:15.05:246,15,0	1/1:5,8:12:22.89:350,23,0
chr10	67371741	.	T	TAC	2724.86	PASS	AB=1.000;AC=31;AF=0.574;AN=54;BaseQRankSum=4.345;DP=218;FS=6.330;HRun=0;HaplotypeScore=36.1449;InbreedingCoeff=0.0112;MQ=71.07;MQ0=6;MQRankSum=0.359;QD=15.31;ReadPosRankSum=2.649;VQSLOD=2.5464;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,0:2:2.99:24,3,0	1/1:2,0:2:5.98:51,6,0	0/1:4,0:2:0:0,0,0	0/0:13,0:8:8.50:0,9,46	0/0:12,0:12:35.98:0,36,474	1/1:12,0:12:6.96:174,7,0	1/1:1,0:1:2.98:21,3,0	1/1:3,39:44:99:1436,115,0	0/1:9,0:8:47.52:48,0,83	0/1:4,0:4:30.68:31,0,31	0/1:4,0:4:36.35:36,0,80	1/1:2,0:2:2.99:24,3,0	0/0:5,0:5:15.05:0,15,228	1/1:6,0:6:8.98:73,9,0	0/1:5,0:5:34.91:58,0,35	1/1:1,0:1:2.99:23,3,0	1/1:13,0:13:12.47:112,12,0	0/1:23,0:22:49.87:249,0,50	0/1:10,0:10:16.12:161,0,16	./.	0/1:2,0:2:14.98:18,0,15	0/0:3,0:3:9.03:0,9,136	0/0:1,0:1:3.01:0,3,46	0/0:1,0:1:3.01:0,3,46	0/1:8,0:8:31.45:31,0,102	1/1:4,0:4:8.95:67,9,0	0/1:9,0:9:26.94:102,0,27	0/1:12,0:11:35.56:148,0,36
chr10	67377285	.	TTTGG	T	1034.19	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=-8.039;DP=626;FS=2.082;HRun=0;HaplotypeScore=159.0689;InbreedingCoeff=0.3452;MQ=73.45;MQ0=0;MQRankSum=0.152;QD=14.77;ReadPosRankSum=-8.477;VQSLOD=1.3863;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:90.26:0,90,1535	0/0:9,0:9:5.08:0,5,344	0/1:11,0:11:44.44:44,0,269	0/1:12,0:11:61.43:123,0,61	0/0:33,0:33:96.28:0,96,1596	0/0:29,0:29:57.15:0,57,1297	0/0:13,0:13:33.66:0,34,615	1/1:3,19:21:54.17:981,54,0	0/0:25,0:25:75.24:0,75,1254	0/0:31,0:31:61.74:0,62,1325	0/0:19,0:19:54.11:0,54,863	0/0:22,0:22:38.20:0,38,961	0/0:21,0:21:63.20:0,63,1041	0/0:21,0:21:57.04:0,57,833	0/0:34,0:34:74.34:0,74,1568	0/0:35,0:35:50.23:0,50,1449	0/0:10,0:10:30.10:0,30,538	0/0:22,0:22:12.42:0,12,890	0/1:25,0:25:2.80:3,0,936	0/0:32,0:32:93.24:0,93,1548	0/0:14,0:14:39.13:0,39,665	0/0:22,0:22:66.22:0,66,1089	0/0:20,0:20:57.13:0,57,942	0/0:11,0:11:24.62:0,25,454	0/0:31,0:31:86.63:0,87,1464	0/0:27,0:27:78.25:0,78,1290	0/0:38,0:38:99:0,111,1800	0/0:7,0:7:21.07:0,21,357
chr10	67377330	.	T	TA	2181.03	PASS	AB=0.567;AC=9;AF=0.161;AN=56;BaseQRankSum=-4.784;DP=586;FS=11.784;HRun=11;HaplotypeScore=87.9683;InbreedingCoeff=0.8180;MQ=69.48;MQ0=7;MQRankSum=1.061;QD=17.59;ReadPosRankSum=-0.862;VQSLOD=3.2751;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,27:32:48.94:677,49,0	1/1:3,8:11:15.03:152,15,0	0/0:26,0:10:7.15:0,7,55	0/0:25,0:15:0.29:0,0,51	1/1:7,1:32:71.61:408,72,0	0/0:24,0:24:62.72:0,63,487	0/0:17,0:17:44.82:0,45,347	1/1:12,20:32:60.90:782,61,0	0/0:16,0:16:35.84:0,36,278	0/0:26,0:26:70.75:0,71,536	0/0:18,0:21:51.19:0,51,360	0/0:15,0:15:32.86:0,33,253	0/0:15,0:15:41.83:0,42,323	0/0:15,0:15:41.60:0,42,310	0/0:25,0:25:56.76:0,57,440	0/0:20,0:21:55.81:0,56,421	0/1:4,13:17:4.38:323,0,4	0/0:16,0:16:41.80:0,42,321	0/0:16,0:16:41.82:0,42,323	0/0:31,0:31:77.65:0,78,600	0/0:10,0:10:17.92:0,18,139	0/0:13,0:13:29.81:0,30,226	0/0:23,0:23:50.78:0,51,392	0/0:9,0:9:26.90:0,27,209	0/0:17,1:19:25.42:0,25,370	0/0:35,0:35:89.51:0,90,678	0/0:37,1:40:49.09:0,49,685	0/0:4,0:4:11.95:0,12,93
chr10	67380060	.	C	CTTTG	2562.82	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-4.809;DP=669;FS=2.989;HRun=0;HaplotypeScore=100.9341;InbreedingCoeff=0.9564;MQ=67.47;MQ0=4;MQRankSum=-1.208;QD=19.71;ReadPosRankSum=-1.024;VQSLOD=3.3695;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:10,12:23:27.09:646,27,0	1/1:5,4:11:12.04:284,12,0	0/0:29,0:17:17.55:0,18,245	0/0:19,0:15:6.02:0,6,90	1/1:20,0:25:18.02:248,18,0	0/0:22,0:22:33.11:0,33,521	0/0:24,0:24:39.13:0,39,616	1/1:35,2:36:15.05:336,15,0	0/0:17,0:18:36.12:0,36,553	0/0:30,0:30:60.20:0,60,952	0/0:27,0:27:57.17:0,57,859	0/0:17,0:17:36.08:0,36,503	0/0:16,0:16:27.09:0,27,430	0/0:15,0:15:33.11:0,33,522	0/0:26,0:26:39.13:0,39,621	0/0:19,0:19:45.15:0,45,710	1/1:8,23:32:51.18:1220,51,0	0/0:21,0:21:33.07:0,33,498	0/0:23,0:20:24.08:0,24,382	0/0:33,0:33:72.23:0,72,1123	0/0:35,0:35:63.21:0,63,996	0/0:21,0:21:45.15:0,45,716	0/0:32,0:32:54.17:0,54,837	0/0:22,0:22:51.13:0,51,784	0/0:26,0:26:39.09:0,39,571	0/0:29,0:29:60.18:0,60,910	0/0:27,0:27:60.20:0,60,955	0/0:8,0:8:15.05:0,15,239
chr10	67381473	.	GAAAAAAT	G	1502.64	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.589;DP=599;FS=0.000;HRun=0;HaplotypeScore=135.5481;InbreedingCoeff=0.9383;MQ=63.56;MQ0=7;MQRankSum=-6.006;QD=48.47;ReadPosRankSum=0.991;VQSLOD=3.6359;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:72.02:0,72,2398	0/0:9,0:9:27.09:0,27,955	0/0:20,0:13:34.83:0,35,995	0/0:13,0:5:8.96:0,9,175	1/1:2,29:31:72.14:1597,72,0	0/0:18,0:18:51.18:0,51,1901	0/0:18,0:16:45.15:0,45,1628	0/0:44,0:44:99:0,114,3200	0/0:21,0:21:54.18:0,54,1962	0/0:27,0:27:72.24:0,72,2562	0/0:20,0:20:51.17:0,51,1882	0/0:11,0:11:30.10:0,30,1037	0/0:15,0:15:42.14:0,42,1569	0/0:13,0:13:36.12:0,36,1250	0/0:25,0:25:72.21:0,72,2419	0/0:22,0:22:48.16:0,48,1719	0/0:24,0:24:66.23:0,66,2276	0/0:18,0:17:45.15:0,45,1651	0/0:29,0:27:75.25:0,75,2814	0/0:37,0:37:99:0,105,3851	0/0:8,0:8:24.08:0,24,862	0/0:15,0:15:42.14:0,42,1566	0/0:16,0:16:39.13:0,39,1308	0/0:12,0:12:27.06:0,27,917	0/0:26,0:26:75.26:0,75,2778	0/0:29,0:29:87.28:0,87,2942	0/0:41,0:40:99:0,108,3807	0/0:9,0:8:24.08:0,24,742
chr10	67381480	.	T	TA	1058.11	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=-9.521;DP=603;FS=7.274;HRun=9;HaplotypeScore=69.0467;InbreedingCoeff=0.6546;MQ=65.29;MQ0=7;MQRankSum=0.059;QD=17.93;ReadPosRankSum=-5.571;VQSLOD=1.9361;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:65.94:0,66,566	0/0:11,0:11:29.99:0,30,260	0/0:20,0:14:31:0,31,241	0/1:12,0:6:10.59:11,0,43	0/0:30,0:30:52.28:0,52,181	0/0:17,0:17:47.99:0,48,417	0/0:17,0:15:44.90:0,45,378	1/1:7,39:46:72.18:1150,72,0	0/0:17,2:20:19.85:0,20,390	0/0:26,0:26:71.95:0,72,616	0/0:20,0:20:53.97:0,54,469	0/0:12,0:12:32.99:0,33,286	0/0:15,0:15:44.97:0,45,386	0/0:14,0:14:35.98:0,36,312	0/0:29,0:29:71.94:0,72,616	0/0:17,0:17:44.97:0,45,387	0/0:25,0:27:66.96:0,67,538	0/0:18,0:17:41.99:0,42,365	0/0:30,0:28:80.97:0,81,703	0/0:36,0:36:99:0,108,937	0/0:8,0:8:24:0,24,208	0/0:17,0:17:47.96:0,48,410	0/0:14,0:14:32.99:0,33,286	0/0:9,0:9:23.99:0,24,208	0/0:28,0:28:77.97:0,78,677	0/0:30,1:31:47.80:0,48,644	0/0:40,0:39:99:0,108,933	0/0:10,0:9:14.98:0,15,130
chr10	67381940	.	TTTA	T	965.45	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=8.018;DP=651;FS=5.822;HRun=0;HaplotypeScore=100.1342;InbreedingCoeff=0.6174;MQ=69.60;MQ0=5;MQRankSum=1.076;QD=18.22;ReadPosRankSum=-0.364;VQSLOD=2.5134;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:90.16:0,90,1637	0/0:9,0:9:27.05:0,27,370	0/0:26,0:17:12.20:0,12,404	0/0:23,0:14:1.05:0,1,133	1/1:5,28:33:94.79:1060,95,0	0/0:23,0:23:63.18:0,63,1233	0/0:14,0:14:42.11:0,42,747	0/1:20,0:20:2.31:2,0,233	0/0:26,0:26:75.24:0,75,1453	0/0:24,0:24:72.15:0,72,1161	0/0:25,0:25:74.83:0,75,1210	0/0:23,0:23:69.24:0,69,1385	0/0:9,0:9:26.99:0,27,425	0/0:25,0:25:71.58:0,72,1296	0/0:37,0:37:99:0,111,2106	0/0:27,0:27:78.25:0,78,1486	0/0:29,0:29:84.20:0,84,1564	0/0:15,0:15:42.14:0,42,858	0/0:26,0:26:78.19:0,78,1302	0/0:28,0:28:84.25:0,84,1534	0/0:13,0:13:39.09:0,39,715	0/0:23,0:23:69.11:0,69,1150	0/0:27,0:27:78.10:0,78,1260	0/0:24,0:24:62.79:0,63,1216	0/0:25,0:25:75.21:0,75,1404	0/0:29,0:29:83.38:0,83,1269	0/0:25,0:25:75.19:0,75,1412	0/0:13,0:13:36.11:0,36,721
chr10	67383798	.	TGGTTC	T	783.54	PASS	AB=0.895;AC=4;AF=0.071;AN=56;BaseQRankSum=1.508;DP=547;FS=17.941;HRun=0;HaplotypeScore=108.4861;InbreedingCoeff=0.3506;MQ=60.21;MQ0=23;MQRankSum=-4.748;QD=11.52;ReadPosRankSum=-2.459;VQSLOD=1.2078;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:36:47.27:0,47,1444	0/0:6,0:6:17.98:0,18,353	0/0:26,0:9:17.72:0,18,178	0/0:24,0:8:1.01:0,1,157	1/1:9,4:14:36.07:606,36,0	0/0:19,0:20:47.07:0,47,917	0/0:13,0:12:20.24:0,20,399	0/1:18,4:22:99:267,0,113	0/0:9,0:9:17.86:0,18,437	0/0:27,0:25:74.26:0,74,1540	0/0:21,0:21:54.69:0,55,1129	0/0:14,0:14:30.08:0,30,558	0/0:14,0:14:33.10:0,33,659	0/0:18,0:19:51.63:0,52,1058	0/0:13,0:11:30.10:0,30,652	0/0:15,0:15:29.55:0,30,728	0/0:36,0:35:91.81:0,92,1563	0/0:35,0:35:72.95:0,73,1894	0/1:29,0:28:24.95:25,0,1024	0/0:15,0:16:39.06:0,39,804	0/0:17,0:17:33.06:0,33,705	0/0:10,0:9:18.05:0,18,345	0/0:10,0:10:24.07:0,24,437	0/0:26,0:25:61.14:0,61,1314	0/0:18,0:18:32.60:0,33,696	0/0:15,0:15:2.33:0,2,660	0/0:27,0:25:50.50:0,50,1020	0/0:8,0:7:17.75:0,18,277
chr10	67384898	.	TTATTTTATTGTATTGTATTG	T	115.88	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.837;DP=722;FS=2.299;HRun=0;HaplotypeScore=340.7504;InbreedingCoeff=0.9941;MQ=77.36;MQ0=12;MQRankSum=2.232;QD=4.83;ReadPosRankSum=-1.139;VQSLOD=1.5099;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:80.27:0,80,2054	0/0:10,0:10:27.07:0,27,981	0/0:36,0:24:22.90:0,23,249	0/0:76,0:39:73.45:0,73,507	1/1:4,20:24:25.48:210,25,0	0/0:27,0:27:78.19:0,78,3728	0/0:14,0:14:42.12:0,42,2623	0/0:27,0:27:66.47:0,66,599	0/0:24,0:24:57.08:0,57,1736	0/0:30,0:30:84.09:0,84,2945	0/0:26,0:26:71.83:0,72,1435	0/0:21,0:21:63.15:0,63,2988	0/0:22,0:22:38.98:0,39,1337	0/0:13,0:13:33.05:0,33,811	0/0:26,0:26:57.10:0,57,1637	0/0:19,0:19:42.08:0,42,1202	0/0:34,0:34:72.12:0,72,2258	0/0:13,0:13:33.07:0,33,1704	0/0:25,0:25:72.12:0,72,2072	0/0:29,0:29:81.10:0,81,2079	0/0:17,0:17:36.02:0,36,1085	0/0:21,0:21:63.11:0,63,1522	0/0:25,0:25:54.94:0,55,801	0/0:20,0:20:45.07:0,45,1220	0/0:32,0:31:87.16:0,87,2231	0/0:31,0:30:87.17:0,87,2343	0/0:29,0:28:62.55:0,63,1904	0/0:20,0:20:51.02:0,51,1763
chr10	67384903	.	T	TTATTG	2311.07	PASS	AB=0.861;AC=30;AF=0.577;AN=52;BaseQRankSum=-5.560;DP=751;FS=14.181;HRun=0;HaplotypeScore=145.5081;InbreedingCoeff=0.6128;MQ=74.59;MQ0=19;MQRankSum=0.215;QD=5.56;ReadPosRankSum=-2.227;VQSLOD=1.4718;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:31:12.04:0,12,140	0/0:4,0:9:10.27:0,10,108	1/1:41,0:22:2.60:10,3,0	./.	1/1:22,0:22:2.92:17,3,0	0/0:28,0:28:27.03:0,27,316	0/0:17,0:17:24.02:0,24,239	./.	1/1:17,9:27:9.03:248,9,0	0/1:28,0:28:18.97:81,0,19	1/1:24,4:28:11.59:126,12,0	0/0:21,0:21:30:0,30,348	0/0:16,0:21:18.05:0,18,210	1/1:10,4:16:3.01:83,3,0	0/1:16,9:26:43.48:131,0,43	1/1:15,8:24:3.90:62,4,0	0/0:16,0:35:27.04:0,27,299	1/1:8,7:15:8.57:403,9,0	1/1:25,0:25:17.99:160,18,0	1/1:24,8:30:17.91:343,18,0	1/1:12,5:21:5.95:101,6,0	0/0:14,0:20:14.91:0,15,129	0/0:16,0:24:5.31:0,5,51	0/0:11,0:17:9.03:0,9,105	1/1:27,4:31:6.02:165,6,0	1/1:26,4:29:11.13:297,11,0	1/1:18,12:30:6.37:166,6,0	1/1:17,1:17:6:106,6,0
chr10	67386384	.	TA	T	375.49	PASS	AB=0.980;AC=3;AF=0.054;AN=56;BaseQRankSum=2.300;DP=444;FS=8.224;HRun=10;HaplotypeScore=65.1959;InbreedingCoeff=0.6736;MQ=75.85;MQ0=8;MQRankSum=-1.081;QD=4.94;ReadPosRankSum=-3.620;VQSLOD=0.0119;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:33.09:0,33,364	0/0:5,0:5:12.01:0,12,121	0/0:55,0:19:31.69:0,32,292	0/1:48,1:21:0.41:0,0,128	0/0:21,0:20:37.64:0,38,277	0/0:16,1:18:18.91:0,19,419	0/0:4,0:4:9.02:0,9,99	1/1:13,13:25:56.74:470,57,0	0/0:8,0:8:24.05:0,24,257	0/0:20,0:20:51.13:0,51,556	0/0:13,0:12:36.10:0,36,397	0/0:10,0:10:29.29:0,29,305	0/0:7,0:7:12.02:0,12,124	0/0:11,0:11:30.07:0,30,322	0/0:8,0:8:24.02:0,24,239	0/0:6,0:6:18.03:0,18,190	0/0:23,0:23:63.11:0,63,671	0/0:26,0:26:75.18:0,75,815	0/0:11,0:11:30.03:0,30,311	0/0:16,0:16:39.09:0,39,422	0/0:5,0:5:15.04:0,15,166	0/0:5,0:5:12:0,12,114	0/0:12,0:12:32.98:0,33,313	0/0:7,0:7:21.06:0,21,232	0/0:14,0:14:31.24:0,31,407	0/0:19,0:18:42.10:0,42,450	0/0:17,0:16:25.26:0,25,246	0/0:13,0:13:33.01:0,33,348
chr10	67386414	.	CA	C	584.92	PASS	AB=0.939;AC=11;AF=0.196;AN=56;BaseQRankSum=9.626;DP=475;FS=4.629;HRun=11;HaplotypeScore=62.9511;InbreedingCoeff=0.6157;MQ=73.58;MQ0=5;MQRankSum=-0.100;QD=3.93;ReadPosRankSum=-0.126;VQSLOD=0.3708;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:20:18.64:47,19,0	1/1:6,0:6:8.25:20,8,0	0/0:37,0:21:5.44:0,5,54	0/1:38,1:16:0.63:1,0,48	0/0:17,1:18:17.40:0,17,378	0/0:20,0:21:56.96:0,57,576	0/0:6,0:6:15.04:0,15,160	1/1:8,23:31:71.87:591,72,0	0/0:11,0:11:24.06:0,24,256	0/0:20,0:20:48.12:0,48,507	0/0:15,1:16:11.45:0,11,327	0/0:9,2:11:0.29:0,0,249	0/1:10,0:10:0.28:0,0,200	0/0:12,0:12:30.08:0,30,320	0/0:9,0:9:18.05:0,18,192	0/0:8,0:8:24.06:0,24,256	1/1:26,0:26:5.89:46,6,0	0/0:21,1:22:35.43:0,35,558	0/0:16,0:16:33.97:0,34,353	0/0:15,1:16:20.46:0,20,417	0/0:6,0:6:15.04:0,15,160	0/0:12,0:12:30.08:0,30,319	0/0:9,0:9:24.06:0,24,256	0/1:13,3:16:30.02:30,0,306	0/0:23,2:25:19.88:0,20,622	0/0:20,0:20:51.12:0,51,537	0/0:13,0:13:30.06:0,30,312	0/0:16,0:18:44.91:0,45,450
chr10	67386423	.	AAAG	A	1657.29	PASS	AB=1.000;AC=8;AF=0.143;AN=56;BaseQRankSum=5.945;DP=470;FS=1.302;HRun=0;HaplotypeScore=73.8129;InbreedingCoeff=0.7532;MQ=68.24;MQ0=4;MQRankSum=-1.712;QD=15.94;ReadPosRankSum=1.111;VQSLOD=3.3651;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,19:20:42.04:588,42,0	1/1:0,7:7:18.06:266,18,0	0/1:23,0:13:1.52:2,0,103	0/1:26,0:11:24.87:25,0,168	0/0:18,0:18:48.09:0,48,895	0/0:22,0:22:66.15:0,66,1205	0/0:9,0:9:27.02:0,27,435	0/0:32,0:32:95.77:0,96,880	0/0:9,0:9:24.08:0,24,518	0/0:20,0:20:55.06:0,55,1075	0/0:13,0:13:36.11:0,36,669	0/0:13,0:13:39.08:0,39,664	0/0:12,0:12:30.08:0,30,544	0/0:11,0:11:30.10:0,30,646	0/0:14,0:14:33.04:0,33,510	0/0:9,0:9:27.08:0,27,543	1/1:2,23:25:63.14:925,63,0	0/0:20,0:20:60.07:0,60,1097	0/0:18,0:18:44.95:0,45,768	0/0:15,0:15:45.15:0,45,891	0/0:7,0:7:21.06:0,21,390	0/0:14,0:14:36.11:0,36,710	0/0:11,0:11:30.08:0,30,568	0/0:15,0:15:45.13:0,45,822	0/0:26,0:26:75.23:0,75,1487	0/0:24,0:24:66.19:0,66,1236	0/0:14,0:14:36.05:0,36,620	0/0:20,0:20:54.09:0,54,924
chr10	67386570	.	TGA	T	3488.43	PASS	AB=0.519;AC=5;AF=0.089;AN=56;BaseQRankSum=12.157;DP=653;FS=0.000;HRun=0;HaplotypeScore=80.9045;InbreedingCoeff=0.7670;MQ=83.81;MQ0=0;MQRankSum=-1.795;QD=36.34;ReadPosRankSum=1.609;VQSLOD=5.9026;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,46:46:99:1676,117,0	0/1:1,13:14:18.89:436,0,19	0/0:20,0:19:45.09:0,45,891	0/0:19,0:19:47.71:0,48,859	0/0:16,0:15:30.08:0,30,549	0/0:22,0:22:66.23:0,66,1210	0/0:24,0:24:72.25:0,72,1310	0/0:26,0:26:66.23:0,66,1201	0/0:27,0:27:78.27:0,78,1424	0/0:21,0:21:57.20:0,57,1037	0/0:5,0:5:12.04:0,12,220	0/0:26,0:26:75.26:0,75,1364	0/0:32,0:32:93.28:0,93,1668	0/0:31,0:31:87.30:0,87,1593	0/0:18,0:18:51.17:0,51,935	0/0:17,0:17:51.17:0,51,935	1/1:2,34:36:96.32:1376,96,0	0/0:19,0:19:54.14:0,54,924	0/0:21,0:21:54.18:0,54,963	0/0:15,0:15:42.11:0,42,726	0/0:75,0:75:99:0,214,3875	0/0:14,0:14:39.13:0,39,714	0/0:10,0:10:24.08:0,24,440	0/0:37,0:37:99:0,108,1948	0/0:19,0:19:51.17:0,51,934	0/0:18,0:18:54.19:0,54,981	0/0:20,0:20:60.18:0,60,1068	0/0:5,0:5:15.05:0,15,274
chr10	67387823	.	CT	C	395.28	PASS	AB=0.914;AC=6;AF=0.107;AN=56;BaseQRankSum=4.912;DP=631;FS=3.867;HRun=13;HaplotypeScore=82.1978;InbreedingCoeff=0.2539;MQ=72.22;MQ0=0;MQRankSum=0.168;QD=3.09;ReadPosRankSum=-1.683;VQSLOD=0.2489;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:26:36.70:0,37,183	0/0:5,0:12:20.18:0,20,113	0/1:20,1:17:7.87:8,0,88	0/0:20,0:16:7.89:0,8,139	0/0:38,1:40:21.92:0,22,346	0/0:34,1:34:59.20:0,59,727	0/0:13,1:14:13.48:0,13,271	1/1:16,21:41:67.48:456,67,0	0/0:23,0:26:59:0,59,567	0/0:33,1:36:53.02:0,53,649	0/0:20,1:22:19.25:0,19,351	0/0:20,1:21:6.67:0,7,337	0/0:18,0:18:45.03:0,45,418	0/0:23,0:24:41.05:0,41,466	0/1:22,4:26:2.71:3,0,437	0/1:14,3:20:21.82:22,0,296	0/0:5,0:23:36.91:0,37,187	0/0:12,0:12:30.02:0,30,277	0/1:20,0:20:28.64:29,0,220	0/0:19,0:19:45.02:0,45,415	0/0:23,1:25:28.26:0,28,449	0/0:20,0:23:44.19:0,44,443	0/0:9,2:12:11.92:0,12,140	0/0:16,1:17:23.15:0,23,380	0/0:15,0:16:20.19:0,20,224	0/0:33,1:37:45.95:0,46,591	0/0:18,1:19:20.13:0,20,340	0/0:6,0:6:18.01:0,18,164
chr10	67387962	.	A	ATGTT	3547.91	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-5.206;DP=679;FS=3.085;HRun=0;HaplotypeScore=112.0926;InbreedingCoeff=0.9862;MQ=68.79;MQ0=0;MQRankSum=-4.994;QD=36.58;ReadPosRankSum=-2.647;VQSLOD=2.8653;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,21:29:45.63:1374,46,0	1/1:5,8:12:18.02:386,18,0	0/0:21,0:19:11.04:0,11,360	0/0:17,0:16:24.01:0,24,325	0/0:34,0:34:78.27:0,78,1285	0/0:28,0:28:63.18:0,63,969	0/0:20,0:20:42.14:0,42,688	1/1:36,0:36:62.83:836,63,0	0/0:21,0:21:48.16:0,48,767	0/0:29,0:29:69.23:0,69,1118	0/0:26,0:27:60.20:0,60,964	0/0:19,0:19:39.10:0,39,594	0/0:22,0:22:51.16:0,51,795	0/0:20,0:20:42.14:0,42,691	0/0:41,0:41:99:0,105,1675	0/0:20,0:20:42.14:0,42,693	1/1:4,15:19:39.13:951,39,0	0/0:22,0:22:48.15:0,48,766	0/0:28,0:28:63.16:0,63,924	0/0:36,0:36:72.25:0,72,1183	0/0:26,0:26:60.13:0,60,868	0/0:24,0:24:48.15:0,48,769	0/0:31,0:31:78.24:0,78,1238	0/0:17,0:16:45.12:0,45,692	0/0:16,0:16:42.12:0,42,644	0/0:28,0:28:66.16:0,66,1035	0/0:24,0:23:48.16:0,48,792	0/0:11,0:11:27.09:0,27,445
chr10	67388958	.	GC	G	660.39	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.212;DP=668;FS=0.000;HRun=4;HaplotypeScore=63.9611;InbreedingCoeff=0.9843;MQ=91.33;MQ0=0;MQRankSum=-1.882;QD=31.45;ReadPosRankSum=2.077;VQSLOD=4.1643;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,108,1504	0/0:12,0:12:36.12:0,36,503	0/0:27,0:27:58.94:0,59,926	0/0:26,0:26:75.19:0,75,972	1/1:0,21:21:63.19:755,63,0	0/0:20,0:20:60.20:0,60,833	0/0:27,0:27:81.27:0,81,1132	0/0:38,0:38:99:0,102,1382	0/0:21,0:21:60.17:0,60,803	0/0:27,0:27:75.25:0,75,1050	0/0:17,0:17:51.17:0,51,714	0/0:31,0:31:93.31:0,93,1293	0/0:25,0:25:75.25:0,75,1049	0/0:21,0:21:63.21:0,63,875	0/0:31,0:31:90.76:0,91,1244	0/0:21,0:21:60.18:0,60,822	0/0:29,0:29:81.24:0,81,1095	0/0:17,0:17:51.17:0,51,714	0/0:26,0:26:72.24:0,72,1006	0/0:15,0:15:45.15:0,45,630	0/0:30,0:30:87.29:0,87,1218	0/0:20,0:20:60.19:0,60,822	0/0:13,0:13:39.13:0,39,546	0/0:20,0:20:60.19:0,60,823	0/0:15,0:15:42.14:0,42,588	0/0:32,0:32:90.29:0,90,1244	0/0:44,0:44:99:0,129,1765	0/0:5,0:5:15.05:0,15,210
chr10	67389651	.	C	CTT	1102.29	PASS	AB=0.913;AC=6;AF=0.107;AN=56;BaseQRankSum=5.166;DP=657;FS=2.448;HRun=12;HaplotypeScore=96.8923;InbreedingCoeff=0.2659;MQ=67.23;MQ0=0;MQRankSum=1.944;QD=9.19;ReadPosRankSum=-6.279;VQSLOD=0.4058;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:42:78.43:0,78,754	0/0:11,0:11:7.49:0,7,129	0/0:10,0:11:8.41:0,8,39	0/1:6,0:6:12.69:13,0,60	1/1:15,25:45:25.21:751,25,0	0/0:18,0:20:29.77:0,30,324	0/1:17,0:17:15.13:15,0,177	0/1:14,12:30:5.38:442,0,5	0/0:18,0:18:29.80:0,30,273	0/0:28,0:33:44:0,44,473	0/0:17,0:22:2.39:0,2,265	0/0:8,0:14:11.53:0,12,141	0/0:17,0:20:5.63:0,6,102	0/0:18,0:18:11.62:0,12,111	0/0:31,0:33:34.03:0,34,431	0/0:21,0:23:26.36:0,26,278	0/1:21,0:21:3.46:3,0,214	0/0:17,0:17:23.33:0,23,215	0/0:23,0:26:34.68:0,35,416	0/0:27,0:30:40.20:0,40,549	0/0:10,0:14:17.56:0,18,197	0/0:24,0:25:48.43:0,48,450	0/0:23,0:25:56.67:0,57,511	0/0:29,0:32:58.23:0,58,494	0/0:20,0:22:41.55:0,42,415	0/0:33,0:33:17.56:0,18,507	0/0:34,0:36:56.12:0,56,558	0/0:10,0:11:26.73:0,27,234
chr10	67389706	.	T	TA	782.17	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-7.614;DP=560;FS=5.259;HRun=6;HaplotypeScore=55.5023;InbreedingCoeff=0.9280;MQ=74.88;MQ0=0;MQRankSum=-1.906;QD=27.93;ReadPosRankSum=-3.393;VQSLOD=2.6569;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:96.05:0,96,950	0/0:11,0:11:33.08:0,33,337	0/0:11,1:12:23.99:0,24,223	0/0:9,0:8:9.01:0,9,92	0/0:33,0:33:96.17:0,96,966	0/0:19,0:19:57.13:0,57,581	0/0:16,0:16:45.08:0,45,451	1/1:4,24:28:72.20:877,72,0	0/0:22,0:22:66.15:0,66,673	0/0:25,0:25:69.15:0,69,703	0/0:14,0:14:39.09:0,39,397	0/0:17,0:17:45.06:0,45,448	0/0:16,0:16:48.08:0,48,481	0/0:24,0:24:63.14:0,63,642	0/0:21,0:21:54.09:0,54,541	0/0:20,0:20:45.09:0,45,457	0/0:18,0:18:45.09:0,45,452	0/0:20,0:20:51.07:0,51,510	0/0:20,0:20:48.04:0,48,477	0/0:22,0:22:66.15:0,66,670	0/0:9,0:9:27.06:0,27,275	0/0:27,0:27:72.16:0,72,734	0/0:23,0:23:60.13:0,60,609	0/0:24,0:24:57.12:0,57,581	0/0:24,0:24:63.12:0,63,635	0/0:27,0:27:75.15:0,75,759	0/0:20,0:20:60.10:0,60,598	0/0:5,0:5:15.03:0,15,152
chr10	67390092	.	A	AAGAT	3168.49	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=-9.882;DP=586;FS=8.023;HRun=0;HaplotypeScore=113.5799;InbreedingCoeff=0.8605;MQ=67.97;MQ0=0;MQRankSum=-0.417;QD=30.76;ReadPosRankSum=3.225;VQSLOD=3.0718;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,15:20:30.10:758,30,0	1/1:2,7:9:15.05:379,15,0	0/0:15,0:14:15.04:0,15,200	0/1:19,0:18:18.26:18,0,189	1/1:8,19:27:42.14:1021,42,0	0/0:23,0:23:54.18:0,54,905	0/0:14,0:14:30.09:0,30,490	0/0:35,0:35:93.27:0,93,1429	0/0:24,0:24:59.96:0,60,928	0/0:23,0:23:51.17:0,51,854	0/0:16,0:16:30.10:0,30,494	0/0:17,0:17:39.13:0,39,670	0/0:17,0:17:36.11:0,36,594	0/0:16,0:16:42.10:0,42,675	0/0:37,0:37:90.30:0,90,1523	0/0:16,0:16:39.09:0,39,639	1/1:5,23:28:48.11:1156,48,0	0/0:19,0:19:48.12:0,48,756	0/0:25,0:25:54.13:0,54,859	0/0:21,0:21:51.07:0,51,834	0/0:25,0:25:60.13:0,60,937	0/0:12,0:12:27.04:0,27,428	0/0:13,0:13:33.10:0,33,524	0/0:25,0:25:60.16:0,60,993	0/0:17,0:17:36.12:0,36,604	0/0:26,0:26:57.19:0,57,982	0/0:29,0:29:78.20:0,78,1273	0/0:18,0:18:33.11:0,33,561
chr10	67390838	.	TA	T	268.20	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.325;DP=508;FS=1.597;HRun=13;HaplotypeScore=58.5162;InbreedingCoeff=0.7607;MQ=77.21;MQ0=0;MQRankSum=2.368;QD=10.32;ReadPosRankSum=-2.892;VQSLOD=2.2342;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:18.03:0,18,175	0/0:11,0:12:23.94:0,24,221	0/0:16,0:13:12.41:0,12,106	0/0:21,0:18:18.61:0,19,120	0/0:21,1:22:35.28:0,35,485	0/0:23,0:23:60.09:0,60,579	0/0:13,1:14:11.16:0,11,270	1/1:4,21:26:52.52:363,53,0	0/0:14,0:14:33.49:0,33,311	0/0:22,0:23:48.03:0,48,452	0/0:15,0:16:35.88:0,36,330	0/0:15,1:15:39.06:0,39,379	0/0:19,0:19:26.15:0,26,407	0/0:13,0:13:36.04:0,36,340	0/0:18,0:19:38.21:0,38,397	0/0:25,0:25:41.96:0,42,555	0/0:23,0:24:56.85:0,57,522	0/0:16,2:18:4.26:0,4,364	0/0:14,0:15:32.78:0,33,283	0/0:17,0:17:29.95:0,30,271	0/0:11,1:12:8.13:0,8,236	0/0:11,0:11:18.03:0,18,175	0/0:21,2:23:32.15:0,32,460	0/0:13,0:13:30.05:0,30,292	0/0:28,0:28:66.07:0,66,625	0/0:23,0:23:57.06:0,57,543	0/0:27,0:26:72.12:0,72,700	0/0:9,0:9:23.99:0,24,215
chr10	67392597	.	C	CGGTCACAGGCCACGCCTT	2963.33	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=3.426;DP=644;FS=1.835;HRun=0;HaplotypeScore=294.7027;InbreedingCoeff=0.8723;MQ=82.04;MQ0=0;MQRankSum=-6.002;QD=35.70;ReadPosRankSum=-4.225;VQSLOD=1.9279;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:37,3:42:15.05:1068,15,0	1/1:14,0:14:17.98:799,18,0	0/0:21,0:21:4.23:0,4,83	0/0:15,0:15:6.02:0,6,114	0/0:29,0:29:48.15:0,48,2194	0/0:26,0:26:57.20:0,57,2328	0/0:24,0:24:36.12:0,36,1282	0/0:28,0:28:18.06:0,18,382	0/0:21,0:21:48.16:0,48,1907	0/0:29,0:29:63.22:0,63,2611	0/0:21,0:20:51.15:0,51,1744	0/0:23,0:23:60.21:0,60,2711	0/0:23,0:23:33.11:0,33,1522	0/0:26,0:26:45.15:0,45,2124	0/0:27,0:27:54.19:0,54,2401	0/0:21,0:20:48.16:0,48,2162	1/1:27,0:27:24.08:1235,24,0	0/0:28,0:28:36.12:0,36,1432	0/0:18,0:18:22.32:0,22,1045	0/0:21,0:21:30.10:0,30,1275	0/0:26,0:26:34.36:0,34,1582	0/0:22,0:22:39.13:0,39,1819	0/0:22,0:22:41.95:0,42,1713	0/0:28,0:28:39.13:0,39,1741	0/0:23,0:23:42.13:0,42,1726	0/0:17,0:17:33.11:0,33,1426	0/0:19,0:19:36.12:0,36,1561	0/0:3,0:3:6.02:0,6,290
chr10	67392677	.	A	AT	562.06	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.951;DP=647;FS=6.889;HRun=1;HaplotypeScore=74.1777;InbreedingCoeff=1.0000;MQ=85.02;MQ0=0;MQRankSum=-2.168;QD=22.48;ReadPosRankSum=0.559;VQSLOD=3.3279;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:90.30:0,90,1257	0/0:18,0:18:51.16:0,51,696	0/0:21,0:21:58.72:0,59,781	0/0:20,0:20:57.15:0,57,724	1/1:3,22:25:68.97:657,69,0	0/0:25,0:25:75.24:0,75,1031	0/0:23,0:23:66.19:0,66,888	0/0:31,0:31:90.29:0,90,1242	0/0:21,0:21:60.20:0,60,839	0/0:32,0:32:96.31:0,96,1325	0/0:18,0:18:54.16:0,54,736	0/0:17,0:17:51.16:0,51,695	0/0:27,0:27:81.27:0,81,1130	0/0:20,0:20:57.19:0,57,795	0/0:23,0:23:63.21:0,63,879	0/0:28,0:28:84.28:0,84,1174	0/0:32,0:32:93.29:0,93,1277	0/0:19,0:19:54.15:0,54,719	0/0:17,0:17:51.17:0,51,712	0/0:19,0:19:57.17:0,57,768	0/0:20,0:20:57.19:0,57,795	0/0:23,0:23:69.22:0,69,948	0/0:20,0:20:60.20:0,60,826	0/0:19,0:19:57.19:0,57,797	0/0:27,0:27:78.26:0,78,1091	0/0:26,0:26:78.25:0,78,1075	0/0:28,0:26:84.27:0,84,1157	0/0:15,0:15:45.15:0,45,629
chr10	67392678	.	G	GA	562.34	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.950;DP=647;FS=6.936;HRun=1;HaplotypeScore=73.7701;InbreedingCoeff=1.0000;MQ=85.05;MQ0=0;MQRankSum=-4.341;QD=23.43;ReadPosRankSum=0.712;VQSLOD=3.2731;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:93.29:0,93,1280	0/0:17,0:17:51.17:0,51,711	0/0:21,0:21:60.18:0,60,796	0/0:20,0:20:57.15:0,57,724	1/1:2,22:24:68.96:657,69,0	0/0:27,0:27:75.24:0,75,1031	0/0:22,0:22:66.19:0,66,886	0/0:32,0:32:90.29:0,90,1245	0/0:21,0:21:60.20:0,60,839	0/0:32,0:32:93.30:0,93,1286	0/0:21,0:21:54.15:0,54,732	0/0:16,0:16:48.15:0,48,655	0/0:27,0:27:81.26:0,81,1114	0/0:20,0:20:60.17:0,60,804	0/0:23,0:23:69.20:0,69,928	0/0:28,0:28:84.28:0,84,1175	0/0:32,0:32:93.31:0,93,1297	0/0:17,0:17:48.16:0,48,670	0/0:17,0:17:51.15:0,51,695	0/0:18,0:18:54.18:0,54,746	0/0:20,0:20:60.18:0,60,821	0/0:23,0:23:69.23:0,69,962	0/0:20,0:20:60.10:0,60,793	0/0:20,0:20:57.19:0,57,797	0/0:27,0:27:81.25:0,81,1115	0/0:26,0:26:78.26:0,78,1084	0/0:28,0:26:84.28:0,84,1161	0/0:15,0:15:45.15:0,45,617
chr10	67400361	.	GA	G	160.04	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.416;DP=487;FS=4.615;HRun=1;HaplotypeScore=77.1318;InbreedingCoeff=0.9507;MQ=71.49;MQ0=2;MQRankSum=0.041;QD=16.00;ReadPosRankSum=-1.768;VQSLOD=3.1345;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,120,1319	0/0:7,0:7:18.03:0,18,224	0/0:25,0:21:49.57:0,50,768	0/0:23,0:20:13.83:0,14,591	0/0:22,0:22:57.19:0,57,899	0/0:21,0:21:53.76:0,54,759	0/0:16,0:16:42.14:0,42,652	1/1:6,4:10:24.02:253,24,0	0/0:20,0:20:60.18:0,60,892	0/0:13,0:13:30.10:0,30,448	0/0:12,0:12:33.11:0,33,527	0/0:20,0:20:57.18:0,57,877	0/0:6,0:6:15.04:0,15,217	0/0:16,0:16:39.13:0,39,611	0/0:16,0:16:45.14:0,45,673	0/0:14,0:14:39.12:0,39,596	0/0:31,0:31:81.18:0,81,924	0/0:14,0:14:39.13:0,39,615	0/0:15,0:15:39.10:0,39,545	0/0:15,0:15:42.07:0,42,551	0/0:31,0:31:81.21:0,81,1189	0/0:10,0:10:30.10:0,30,479	0/0:11,0:11:26.71:0,27,358	0/0:17,0:17:45.13:0,45,677	0/0:12,0:12:33.07:0,33,459	0/0:21,0:21:54.13:0,54,712	0/0:16,0:16:48.16:0,48,765	0/0:8,0:8:24.04:0,24,334
chr10	67400364	.	AGG	A	1727.32	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=7.431;DP=504;FS=10.717;HRun=10;HaplotypeScore=80.7137;InbreedingCoeff=0.9423;MQ=72.24;MQ0=1;MQRankSum=-3.216;QD=20.81;ReadPosRankSum=4.978;VQSLOD=1.7633;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,35:43:96.24:1069,96,0	1/1:3,4:7:11.94:117,12,0	0/0:25,0:22:22.69:0,23,422	0/0:19,0:18:22.80:0,23,388	0/0:22,0:21:50.99:0,51,449	0/0:21,0:22:32.45:0,32,441	0/0:22,0:24:50.05:0,50,539	0/0:11,0:11:11.66:0,12,71	0/0:17,0:21:46.09:0,46,584	0/0:11,0:10:15.05:0,15,238	0/0:12,0:12:21.06:0,21,309	0/0:19,0:20:41.31:0,41,540	0/0:9,0:9:21.02:0,21,241	0/0:18,0:18:36.08:0,36,477	0/0:16,0:17:35.55:0,36,424	0/0:16,0:18:44.57:0,45,547	1/1:6,26:33:62.88:680,63,0	0/0:17,0:18:41.51:0,42,486	0/0:11,0:13:20.04:0,20,253	0/0:12,0:12:18.04:0,18,240	0/0:32,0:38:82.60:0,83,1004	0/0:10,0:10:21.07:0,21,333	0/0:8,0:8:12.44:0,12,191	0/0:16,0:17:38.57:0,39,493	0/0:10,0:10:18.02:0,18,220	0/0:14,0:15:17.27:0,17,226	0/0:22,0:22:57.11:0,57,768	0/0:6,0:6:18.06:0,18,286
chr10	67400365	.	G	GA	492.45	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.767;DP=492;FS=0.000;HRun=1;HaplotypeScore=95.1186;InbreedingCoeff=0.9101;MQ=73.36;MQ0=1;MQRankSum=-0.058;QD=22.38;ReadPosRankSum=0.615;VQSLOD=3.6015;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,107,715	0/0:7,0:7:20.46:0,20,146	0/0:26,0:21:10.03:0,10,404	0/0:21,0:19:31.69:0,32,386	1/1:1,20:21:49:587,49,0	0/0:20,0:20:19.13:0,19,457	0/0:23,0:23:59.70:0,60,581	0/0:14,0:14:25.02:0,25,188	0/0:21,0:21:56.44:0,56,610	0/0:11,0:10:21.03:0,21,258	0/0:9,0:9:27.06:0,27,328	0/0:18,0:18:46.47:0,46,518	0/0:9,0:9:23.99:0,24,252	0/0:17,0:17:42:0,42,462	0/0:17,0:17:44.91:0,45,480	0/0:17,0:17:41.91:0,42,474	0/0:33,0:33:80.05:0,80,550	0/0:16,0:16:37.95:0,38,468	0/0:12,0:12:26.74:0,27,284	0/0:11,0:11:27:0,27,274	0/0:38,0:38:80.48:0,80,870	0/0:9,0:9:27.07:0,27,344	0/0:8,0:8:15.03:0,15,193	0/0:18,0:18:47.91:0,48,532	0/0:10,0:10:21.03:0,21,228	0/0:15,0:15:35.86:0,36,358	0/0:22,0:22:45.60:0,46,584	0/0:7,0:7:18.06:0,18,250
chr10	67400912	.	GTACT	G	524.51	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=4.926;DP=411;FS=4.102;HRun=0;HaplotypeScore=69.5172;InbreedingCoeff=0.9211;MQ=59.55;MQ0=7;MQRankSum=-4.519;QD=14.57;ReadPosRankSum=0.717;VQSLOD=2.7897;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:2,14:15:18.06:327,18,0	1/1:4,6:9:9.03:163,9,0	0/0:12,0:10:16.63:0,17,592	0/0:12,0:9:24.55:0,25,613	0/0:14,0:14:33.11:0,33,825	0/0:11,0:10:30.10:0,30,766	0/0:14,0:13:33.11:0,33,844	0/0:30,0:26:69.24:0,69,1705	0/0:15,0:15:42.14:0,42,1092	0/0:22,0:22:57.20:0,57,1491	0/0:10,0:10:24.08:0,24,626	0/0:20,0:20:45.15:0,45,1161	0/0:19,0:19:53.92:0,54,1338	0/0:8,0:8:9.03:0,9,235	0/0:21,0:21:60.20:0,60,1510	0/0:13,0:13:30.10:0,30,680	1/1:3,7:8:9.03:164,9,0	0/0:5,0:5:15.05:0,15,392	0/0:14,0:14:42.14:0,42,1064	0/0:15,0:15:42.14:0,42,1073	0/0:16,0:15:36.12:0,36,921	0/0:10,0:10:27.09:0,27,683	0/0:11,0:11:23.87:0,24,588	0/0:24,0:23:57.15:0,57,1392	0/0:20,0:20:57.20:0,57,1442	0/0:17,0:16:45.15:0,45,1138	0/0:10,0:10:30.10:0,30,784	0/0:11,0:11:30.10:0,30,693
chr10	67401039	.	A	AC	1330.50	PASS	AB=0.960;AC=9;AF=0.161;AN=56;BaseQRankSum=7.956;DP=523;FS=0.000;HRun=7;HaplotypeScore=69.6878;InbreedingCoeff=0.8366;MQ=66.95;MQ0=18;MQRankSum=-4.161;QD=13.31;ReadPosRankSum=0.094;VQSLOD=2.8812;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,18:28:69.16:719,69,0	1/1:2,6:8:15.04:174,15,0	0/0:39,0:20:54.43:0,54,387	0/0:25,0:9:6.84:0,7,72	1/1:8,7:16:14.86:135,15,0	0/0:21,0:21:50.77:0,51,456	0/0:21,0:19:29.83:0,30,277	0/1:23,0:19:20.47:20,0,158	0/0:15,0:15:30:0,30,271	0/0:17,0:15:35.98:0,36,322	0/0:11,0:11:29.96:0,30,263	0/0:22,0:21:53.94:0,54,480	0/0:15,0:15:40.12:0,40,333	0/0:17,0:17:36.86:0,37,323	0/0:18,0:18:38.92:0,39,357	0/0:10,0:10:24.02:0,24,226	1/1:8,13:19:45.25:444,45,0	0/0:22,0:21:47.69:0,48,441	0/0:18,0:16:26.95:0,27,240	0/0:15,0:14:31.84:0,32,280	0/0:24,0:22:50.95:0,51,456	0/0:14,0:14:38.22:0,38,325	0/0:15,0:15:32.98:0,33,297	0/0:16,0:15:45.03:0,45,417	0/0:17,0:17:41.91:0,42,361	0/0:26,0:24:62.96:0,63,559	0/0:14,0:13:35.97:0,36,325	0/0:10,0:10:19.23:0,19,167
chr10	67401046	.	CT	C	608.37	PASS	AB=0.941;AC=12;AF=0.214;AN=56;BaseQRankSum=5.785;DP=520;FS=5.404;HRun=11;HaplotypeScore=70.7179;InbreedingCoeff=0.7364;MQ=72.77;MQ0=8;MQRankSum=0.587;QD=4.38;ReadPosRankSum=-0.703;VQSLOD=0.9727;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:29:46.41:205,46,0	1/1:9,0:9:20.67:113,21,0	0/0:40,2:24:14.22:0,14,287	0/1:27,1:12:6.41:6,0,84	1/1:9,0:9:9.02:45,9,0	0/0:21,0:21:39.87:0,40,461	0/0:21,0:19:14.99:0,15,313	1/1:21,7:26:16.27:288,16,0	0/0:13,0:13:31.30:0,31,306	0/0:14,0:13:24.05:0,24,244	0/0:12,1:13:8.33:0,8,241	0/0:21,1:22:20.45:0,20,406	0/0:16,0:16:25.57:0,26,312	0/0:16,0:16:32.34:0,32,301	0/0:18,0:18:45.03:0,45,443	0/0:9,0:9:21.05:0,21,222	1/1:24,0:23:9.44:118,9,0	0/0:19,3:22:45.06:0,45,458	0/0:9,1:10:2.41:0,2,212	0/0:15,0:14:10.74:0,11,264	0/0:24,0:22:29.27:0,29,443	0/0:12,1:13:8.45:0,8,286	0/0:15,1:16:14.10:0,14,317	0/0:18,0:18:45.03:0,45,446	0/0:18,0:18:29.97:0,30,278	0/0:24,1:24:20.29:0,20,376	0/0:14,0:14:35.26:0,35,339	0/1:10,1:11:1.55:2,0,166
chr10	67401221	.	TACACACACACACACACACACACAC	T	1415.91	PASS	AB=0.761;AC=3;AF=0.058;AN=52;BaseQRankSum=3.742;DP=529;FS=10.945;HRun=0;HaplotypeScore=268.6772;InbreedingCoeff=0.4509;MQ=61.19;MQ0=10;MQRankSum=-4.444;QD=21.13;ReadPosRankSum=-1.105;VQSLOD=0.7784;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:35,16:51:44.05:1158,0,44	./.	./.	0/0:19,0:16:6.02:0,6,148	0/0:13,0:12:12.04:0,12,422	0/0:24,0:24:27.09:0,27,2215	0/0:22,0:23:33.11:0,33,2226	0/0:25,0:24:30.10:0,30,1453	0/0:15,0:17:33.09:0,33,2842	0/0:22,0:21:45.15:0,45,3170	0/0:8,0:6:6.02:0,6,449	0/0:20,0:18:34:0,34,2372	0/0:17,0:17:24.05:0,24,1532	0/0:17,0:18:27.56:0,28,2371	0/0:15,0:15:24.08:0,24,1746	0/0:17,0:33:40.30:0,40,3227	1/1:10,6:16:10.72:355,11,0	0/0:25,0:27:62.80:0,63,5115	0/0:7,0:7:8.99:0,9,387	0/0:11,0:11:9.03:0,9,452	0/0:33,0:31:39.60:0,40,3105	0/0:13,0:13:13.80:0,14,750	0/0:13,0:13:15.05:0,15,1287	0/0:28,0:27:48.16:0,48,3463	0/0:12,0:12:15.05:0,15,1296	0/0:16,0:15:20.28:0,20,1502	0/0:13,0:14:18.06:0,18,1036	0/0:7,0:7:18.06:0,18,1237
chr10	67402376	.	TG	T	1735.49	PASS	AB=0.967;AC=8;AF=0.143;AN=56;BaseQRankSum=7.447;DP=560;FS=0.965;HRun=9;HaplotypeScore=59.9527;InbreedingCoeff=0.7803;MQ=83.48;MQ0=0;MQRankSum=0.197;QD=15.78;ReadPosRankSum=-2.411;VQSLOD=3.2677;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:30:87.05:0,87,958	0/0:6,0:6:15.04:0,15,172	0/0:25,0:25:38.86:0,39,410	0/0:16,0:16:24.12:0,24,234	0/1:17,0:17:2.10:2,0,277	1/1:2,22:24:66.04:604,66,0	1/1:0,18:18:39.02:357,39,0	1/1:2,35:37:99:914,102,0	0/0:17,0:17:48.14:0,48,554	0/0:23,0:23:39.11:0,39,443	0/0:11,0:11:27.06:0,27,301	0/0:24,0:24:66.20:0,66,759	0/0:11,1:12:5.62:0,6,310	0/0:12,0:12:30.09:0,30,346	0/0:22,0:22:60.16:0,60,681	0/0:20,0:20:54.15:0,54,613	0/0:33,0:33:84.22:0,84,951	0/0:26,1:27:44.73:0,45,758	0/0:18,0:18:48.10:0,48,532	0/0:11,0:11:24.07:0,24,277	0/0:18,0:18:36.11:0,36,415	0/1:13,1:14:0.38:0,0,250	0/0:23,1:24:39.01:0,39,700	0/0:24,0:24:60.16:0,60,681	0/0:17,0:17:42.12:0,42,485	0/0:29,0:29:72.19:0,72,813	0/0:21,0:21:63.18:0,63,718	0/0:8,0:8:18.05:0,18,208
chr10	67402622	.	GT	G	640.65	PASS	AB=0.865;AC=11;AF=0.196;AN=56;BaseQRankSum=9.484;DP=575;FS=1.625;HRun=12;HaplotypeScore=80.1150;InbreedingCoeff=0.4692;MQ=72.92;MQ0=0;MQRankSum=-5.752;QD=4.27;ReadPosRankSum=1.476;VQSLOD=1.4747;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:11,15:26:35.75:278,36,0	0/1:4,6:10:36.99:115,0,37	0/0:12,0:12:16.18:0,16,163	0/1:15,0:15:13.60:14,0,143	1/1:5,0:21:31.20:89,31,0	0/0:19,0:19:45.06:0,45,440	0/0:15,0:16:38.91:0,39,380	0/0:17,0:37:78.26:0,78,496	0/0:16,1:21:17.56:0,18,343	0/0:25,0:25:60.06:0,60,586	0/0:18,1:19:7.94:0,8,407	0/0:19,1:20:30.83:0,31,468	0/0:14,0:14:30.04:0,30,292	0/0:22,0:22:54.52:0,55,511	0/0:28,1:30:45.68:0,46,604	0/0:26,1:27:45.80:0,46,617	1/1:7,12:18:35.80:278,36,0	0/1:9,2:11:19.48:19,0,161	0/0:21,0:21:48.04:0,48,463	0/0:17,1:18:15.82:0,16,332	0/0:16,0:16:39.06:0,39,385	0/1:17,1:22:1.58:2,0,324	0/0:17,0:20:41.90:0,42,401	0/0:20,2:23:10.44:0,10,444	0/0:13,1:15:18.65:0,19,337	0/1:23,3:26:3.67:4,0,479	0/0:33,2:34:46.67:0,47,814	0/0:14,0:15:41.91:0,42,405
chr10	67402653	.	CA	C	3425.90	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=13.637;DP=525;FS=8.156;HRun=3;HaplotypeScore=69.7334;InbreedingCoeff=0.9996;MQ=80.22;MQ0=0;MQRankSum=-5.029;QD=31.72;ReadPosRankSum=-2.971;VQSLOD=2.0808;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:3,19:22:48.15:593,48,0	1/1:0,10:10:30.09:372,30,0	0/0:19,0:18:33.72:0,34,575	0/0:13,0:13:34.31:0,34,455	1/1:0,20:20:54.17:667,54,0	0/0:15,0:15:45.15:0,45,647	0/0:19,0:19:53.97:0,54,748	1/1:2,33:35:99:1199,99,0	0/0:23,0:23:63.21:0,63,906	0/0:22,0:22:63.20:0,63,891	0/0:12,0:12:36.12:0,36,518	0/0:21,0:21:63.21:0,63,907	0/0:15,0:15:42.14:0,42,605	0/0:16,0:16:42.14:0,42,605	0/0:27,0:27:78.26:0,78,1123	0/0:28,0:28:81.25:0,81,1146	1/1:1,20:20:48.15:595,48,0	0/0:11,0:11:33.11:0,33,475	0/0:12,0:12:36.11:0,36,502	0/0:15,0:15:42.13:0,42,586	0/0:14,0:14:39.09:0,39,522	0/0:19,0:19:51.16:0,51,714	0/0:16,0:16:45.08:0,45,603	0/0:19,0:19:57.15:0,57,797	0/0:14,0:14:42.12:0,42,585	0/0:17,0:17:48.16:0,48,691	0/0:37,0:37:99:0,111,1580	0/0:13,0:13:39.13:0,39,562
chr10	67404142	.	AC	A	1363.43	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.903;DP=622;FS=0.631;HRun=2;HaplotypeScore=77.0369;InbreedingCoeff=0.9916;MQ=64.45;MQ0=1;MQRankSum=-4.869;QD=34.09;ReadPosRankSum=-3.831;VQSLOD=2.3812;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,120,1678	0/0:7,0:7:18.06:0,18,269	0/0:22,0:22:63.65:0,64,900	0/0:15,0:14:42.14:0,42,607	0/0:25,0:25:66.22:0,66,982	0/0:25,0:25:75.25:0,75,1124	0/0:28,0:28:84.20:0,84,1221	1/1:1,39:39:99:1458,114,0	0/0:15,0:15:40.38:0,40,587	0/0:24,0:24:69.23:0,69,1029	0/0:19,0:19:48.06:0,48,719	0/0:23,0:23:69.23:0,69,1028	0/0:14,0:14:42.14:0,42,629	0/0:21,0:21:57.19:0,57,852	0/0:29,0:29:81.19:0,81,1185	0/0:17,0:16:45.06:0,45,639	0/0:33,0:32:66.20:0,66,943	0/0:30,0:30:90.30:0,90,1342	0/0:20,0:20:57.18:0,57,836	0/0:13,0:13:39.13:0,39,584	0/0:28,0:28:84.27:0,84,1233	0/0:19,0:19:54.18:0,54,807	0/0:13,0:13:36.12:0,36,538	0/0:16,0:16:48.16:0,48,719	0/0:28,0:28:84.26:0,84,1237	0/0:24,0:24:72.23:0,72,1057	0/0:18,0:18:54.18:0,54,807	0/0:12,0:12:36.08:0,36,496
chr10	67404173	.	CTTA	C	2380.63	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=12.773;DP=508;FS=6.766;HRun=0;HaplotypeScore=79.6014;InbreedingCoeff=0.9870;MQ=64.01;MQ0=3;MQRankSum=-0.603;QD=21.07;ReadPosRankSum=0.851;VQSLOD=3.0338;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:30:68.96:714,69,0	1/1:7,0:7:11.94:123,12,0	0/0:13,0:13:30.06:0,30,476	0/0:8,0:7:18.04:0,18,274	1/1:18,1:18:41.56:388,42,0	0/0:20,0:19:51.16:0,51,1034	0/0:28,0:28:75.24:0,75,1470	1/1:20,10:29:74.96:934,75,0	0/0:8,0:8:21.05:0,21,387	0/0:20,0:20:57.19:0,57,1139	0/0:18,0:18:42.13:0,42,813	0/0:22,0:22:57.18:0,57,1154	0/0:6,0:6:18.02:0,18,336	0/0:24,0:24:69.22:0,69,1386	0/0:21,0:21:60.12:0,60,1164	0/0:17,0:16:42.14:0,42,850	1/1:26,1:25:35.32:396,35,0	0/0:19,0:19:54.17:0,54,1094	0/0:19,0:19:57.15:0,57,1003	0/0:16,0:16:48.14:0,48,879	0/0:18,0:18:51.16:0,51,1020	0/0:10,0:10:24.08:0,24,503	0/0:11,0:11:33.09:0,33,601	0/0:16,0:16:42.14:0,42,815	0/0:27,0:27:75.22:0,75,1464	0/0:27,0:27:69.21:0,69,1332	0/0:18,0:18:48.16:0,48,993	0/0:9,0:9:27.06:0,27,473
chr10	67404176	.	ATTAT	A	3097.73	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=11.913;DP=502;FS=6.633;HRun=0;HaplotypeScore=86.6045;InbreedingCoeff=0.9906;MQ=63.83;MQ0=3;MQRankSum=-3.684;QD=27.66;ReadPosRankSum=0.856;VQSLOD=2.9873;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,28:29:71.07:1335,71,0	1/1:1,7:8:15.02:251,15,0	0/0:12,0:12:30.09:0,30,572	0/0:8,0:6:18.04:0,18,306	1/1:1,17:17:44.87:640,45,0	0/0:19,0:18:51.16:0,51,1274	0/0:26,0:26:75.24:0,75,1793	1/1:29,0:29:33.07:357,33,0	0/0:8,0:8:21.05:0,21,465	0/0:20,0:20:60.20:0,60,1413	0/0:17,0:17:45.12:0,45,1029	0/0:22,0:22:61.44:0,61,1465	0/0:6,0:6:18.02:0,18,411	0/0:26,0:26:75.24:0,75,1822	0/0:21,0:21:60.12:0,60,1422	0/0:18,0:17:45.15:0,45,1120	1/1:3,25:26:41.43:689,41,0	0/0:19,0:19:57.18:0,57,1366	0/0:19,0:19:57.16:0,57,1218	0/0:16,0:16:48.14:0,48,1053	0/0:18,0:18:51.17:0,51,1248	0/0:9,0:9:24.08:0,24,613	0/0:11,0:11:33.10:0,33,723	0/0:16,0:16:42.14:0,42,1016	0/0:26,0:26:78.23:0,78,1827	0/0:27,0:27:69.21:0,69,1665	0/0:17,0:17:51.18:0,51,1262	0/0:9,0:9:27.06:0,27,575
chr10	67404284	.	C	CT	928.14	PASS	AB=0.916;AC=15;AF=0.268;AN=56;BaseQRankSum=2.872;DP=459;FS=1.185;HRun=15;HaplotypeScore=80.4060;InbreedingCoeff=0.2831;MQ=65.93;MQ0=14;MQRankSum=-1.982;QD=4.78;ReadPosRankSum=-2.198;VQSLOD=1.5667;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:15,11:26:16.42:248,16,0	1/1:6,3:9:9.86:75,10,0	0/0:20,0:10:7.16:0,7,31	0/1:21,1:12:0.44:6,0,0	1/1:20,7:25:24.51:272,25,0	0/0:11,0:11:7.96:0,8,52	0/0:16,1:18:8.26:0,8,147	1/1:10,5:17:29.11:189,29,0	0/0:6,0:6:5.75:0,6,36	0/0:9,0:9:12.99:0,13,66	0/0:23,0:24:26.69:0,27,154	0/1:15,1:16:27.47:27,0,72	0/0:6,0:5:3.25:0,3,17	0/0:10,0:9:2.68:0,3,18	0/0:20,1:21:1.87:0,2,158	0/1:7,0:6:1.58:2,0,41	0/1:23,10:32:13.83:230,0,14	0/0:26,0:28:32.51:0,33,186	0/0:21,0:19:4.80:0,5,127	0/0:19,0:20:20.85:0,21,117	0/0:8,0:8:8.55:0,9,54	0/0:7,0:7:4.82:0,5,24	0/1:6,2:8:11.55:20,0,12	0/0:14,0:15:3.55:0,4,123	0/1:7,0:6:16.37:16,0,27	0/1:18,1:19:3.37:3,0,117	0/0:25,0:24:9.44:0,9,134	0/0:9,0:9:8.64:0,9,54
chr10	67406461	.	AAAGT	A	306.23	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.284;DP=654;FS=19.371;HRun=0;HaplotypeScore=127.3750;InbreedingCoeff=0.8996;MQ=82.57;MQ0=0;MQRankSum=-4.666;QD=30.62;ReadPosRankSum=-3.567;VQSLOD=1.3857;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:32.16:0,32,1031	0/0:8,0:8:24.08:0,24,646	0/0:22,0:22:57.19:0,57,1360	0/0:20,0:20:19.30:0,19,1093	0/0:19,0:19:6.36:0,6,884	0/0:26,0:26:78.27:0,78,2105	0/0:24,0:24:72.25:0,72,1906	1/1:3,7:10:21.07:398,21,0	0/0:30,0:30:90.29:0,90,2322	0/0:24,0:24:66.23:0,66,1768	0/0:24,0:24:69.24:0,69,1823	0/0:25,0:25:69.24:0,69,1839	0/0:29,0:29:87.30:0,87,2291	0/0:32,0:32:93.32:0,93,2461	0/0:32,0:32:87.30:0,87,2336	0/0:29,0:29:87.30:0,87,2349	0/0:17,0:17:48.16:0,48,1150	0/0:17,0:17:48.16:0,48,1277	0/0:22,0:22:60.21:0,60,1618	0/0:20,0:20:51.65:0,52,1358	0/0:18,0:18:54.19:0,54,1346	0/0:27,0:27:81.28:0,81,2184	0/0:23,0:23:66.23:0,66,1746	0/0:30,0:30:90.31:0,90,2414	0/0:28,0:28:84.29:0,84,2256	0/0:25,0:25:69.24:0,69,1830	0/0:32,0:32:93.32:0,93,2438	0/0:25,0:25:75.26:0,75,2022
chr10	67406477	.	A	AAGAACCACT	7682.61	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=0.091;DP=650;FS=91.821;HRun=0;HaplotypeScore=175.1910;InbreedingCoeff=0.9971;MQ=82.67;MQ0=0;MQRankSum=-11.705;QD=121.95;ReadPosRankSum=-2.331;VQSLOD=1.5302;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,11:12:33.11:1546,33,0	1/1:0,7:7:21.07:1060,21,0	0/0:23,0:23:66.01:0,66,1636	0/0:18,0:18:52.40:0,52,1502	1/1:1,16:18:45.63:2094,46,0	0/0:31,0:31:90.31:0,90,2861	0/0:24,0:24:72.25:0,72,2211	1/1:16,4:20:57.20:2320,57,0	0/0:31,0:31:93.30:0,93,2797	0/0:27,0:27:72.24:0,72,2239	0/0:21,0:21:57.20:0,57,1838	0/0:27,0:27:81.28:0,81,2552	0/0:27,0:27:81.26:0,81,2386	0/0:31,0:31:93.32:0,93,2930	0/0:27,0:27:81.25:0,81,2449	0/0:30,0:30:90.31:0,90,2823	1/1:2,4:6:18.02:663,18,0	0/0:16,0:16:45.13:0,45,1324	0/0:21,0:21:63.20:0,63,1918	0/0:21,0:21:60.19:0,60,1797	0/0:19,0:19:57.17:0,57,1692	0/0:30,0:30:87.29:0,87,2595	0/0:23,0:23:69.22:0,69,2152	0/0:28,0:28:81.26:0,81,2472	0/0:27,0:27:81.28:0,81,2594	0/0:25,0:25:72.25:0,72,2267	0/0:32,0:31:93.29:0,93,2821	0/0:28,0:28:84.23:0,84,2492
chr10	67406598	.	T	TA	1812.94	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.454;DP=640;FS=18.249;HRun=1;HaplotypeScore=73.7904;InbreedingCoeff=0.9992;MQ=72.62;MQ0=0;MQRankSum=-4.798;QD=32.96;ReadPosRankSum=0.937;VQSLOD=2.0311;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,20:23:54.10:773,54,0	1/1:0,9:9:27.02:376,27,0	0/0:25,0:25:63.10:0,63,831	0/0:29,0:24:42.56:0,43,701	0/0:10,0:10:29.92:0,30,311	0/0:18,0:18:51.17:0,51,661	0/0:29,0:29:81.20:0,81,980	0/0:22,0:22:66.20:0,66,831	0/0:24,0:24:69.19:0,69,866	0/0:19,0:19:57.18:0,57,728	0/0:30,0:30:84.26:0,84,1073	0/0:22,0:22:63.20:0,63,817	0/0:27,0:27:78.25:0,78,1011	0/0:19,0:19:54.17:0,54,696	0/0:30,0:30:81.23:0,81,1022	0/0:25,0:25:75.21:0,75,931	1/1:1,22:23:42.16:807,42,0	0/0:32,0:32:90.22:0,90,1130	0/0:15,0:15:45.10:0,45,552	0/0:25,0:25:75.24:0,75,973	0/0:30,0:30:84.24:0,84,1061	0/0:26,0:26:78.23:0,78,987	0/0:25,0:25:69.12:0,69,843	0/0:26,0:26:69.22:0,69,895	0/0:16,0:16:45.13:0,45,570	0/0:27,0:27:78.25:0,78,1012	0/0:22,0:21:66.21:0,66,855	0/0:10,0:10:30.10:0,30,389
chr10	67406873	.	AC	A	1118.54	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=7.804;DP=509;FS=6.416;HRun=5;HaplotypeScore=61.1220;InbreedingCoeff=0.9825;MQ=92.94;MQ0=0;MQRankSum=-6.803;QD=23.80;ReadPosRankSum=3.176;VQSLOD=2.4900;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,22:27:60.17:680,60,0	1/1:0,4:4:12.03:136,12,0	0/0:22,0:22:54.17:0,54,716	0/0:25,0:25:64.94:0,65,771	0/0:10,0:10:30.10:0,30,409	0/0:15,0:15:39.12:0,39,517	0/0:26,0:26:60.15:0,60,790	0/0:30,0:30:75.19:0,75,946	0/0:20,0:20:46.34:0,46,565	0/0:16,0:16:39.13:0,39,523	0/0:17,0:17:48.14:0,48,626	0/0:11,0:11:27.08:0,27,353	0/0:14,0:14:42.14:0,42,573	0/0:20,0:20:60.15:0,60,768	0/0:21,0:21:60.20:0,60,817	0/0:24,0:24:66.21:0,66,887	1/1:0,16:16:39.11:442,39,0	0/0:23,0:22:66.20:0,66,879	0/0:13,0:13:33.11:0,33,447	0/0:13,0:13:36.10:0,36,460	0/0:34,0:34:93.26:0,93,1222	0/0:15,0:15:45.14:0,45,597	0/0:17,0:17:45.10:0,45,579	0/0:17,0:16:51.12:0,51,664	0/0:16,0:16:45.15:0,45,615	0/0:20,0:20:57.18:0,57,763	0/0:18,0:18:51.13:0,51,649	0/0:5,0:5:15.05:0,15,205
chr10	67406952	.	AAAG	A	2316.84	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=12.143;DP=631;FS=3.919;HRun=0;HaplotypeScore=96.4798;InbreedingCoeff=0.9907;MQ=83.80;MQ0=1;MQRankSum=-4.473;QD=36.78;ReadPosRankSum=1.637;VQSLOD=4.4948;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,38:40:99:1629,114,0	1/1:0,7:7:18.03:262,18,0	0/0:20,0:20:51.17:0,51,1090	0/0:22,0:22:47.61:0,48,1072	0/0:16,0:16:42.14:0,42,912	0/0:28,0:28:84.29:0,84,1835	0/0:19,0:19:54.19:0,54,1128	0/0:35,0:35:93.31:0,93,1952	0/0:20,0:20:60.19:0,60,1246	0/0:20,0:20:57.19:0,57,1210	0/0:20,0:20:60.19:0,60,1281	0/0:25,0:25:75.26:0,75,1634	0/0:23,0:22:63.20:0,63,1306	0/0:27,0:27:81.28:0,81,1769	0/0:26,0:26:78.24:0,78,1637	0/0:27,0:27:75.26:0,75,1655	1/1:2,14:16:39:567,39,0	0/0:19,0:19:57.20:0,57,1258	0/0:16,0:16:45.15:0,45,960	0/0:21,0:21:57.17:0,57,1169	0/0:24,0:24:69.19:0,69,1414	0/0:21,0:21:60.19:0,60,1279	0/0:24,0:24:66.20:0,66,1401	0/0:26,0:26:78.27:0,78,1697	0/0:8,0:8:24.08:0,24,527	0/0:33,0:33:93.32:0,93,2040	0/0:43,0:43:99:0,129,2676	0/0:5,0:5:15.03:0,15,265
chr10	67407023	.	C	CCAAAATTT	1815.81	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-3.636;DP=679;FS=2.045;HRun=0;HaplotypeScore=172.2218;InbreedingCoeff=0.9875;MQ=82.88;MQ0=0;MQRankSum=-5.906;QD=78.95;ReadPosRankSum=2.337;VQSLOD=3.9331;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,114,2964	0/0:17,0:17:42.14:0,42,1086	0/0:18,0:18:42.14:0,42,1025	0/0:21,0:21:30.38:0,30,880	1/1:5,16:23:45.15:1911,45,0	0/0:16,0:16:45.14:0,45,1129	0/0:29,0:29:78.25:0,78,1926	0/0:37,0:37:93.28:0,93,2074	0/0:18,0:18:42.14:0,42,1069	0/0:38,0:38:99:0,99,2569	0/0:26,0:26:69.22:0,69,1750	0/0:25,0:25:72.21:0,72,1740	0/0:20,0:20:51.17:0,51,1319	0/0:32,0:32:78.24:0,78,1909	0/0:21,0:21:60.19:0,60,1527	0/0:27,0:27:66.17:0,66,1586	0/0:34,0:34:93.26:0,93,2283	0/0:24,0:24:60.21:0,60,1580	0/0:27,0:27:60.18:0,60,1410	0/0:9,0:9:21.07:0,21,547	0/0:35,0:35:99:0,99,2499	0/0:16,0:16:42.14:0,42,1095	0/0:19,0:19:54.16:0,54,1348	0/0:29,0:29:75.26:0,75,1904	0/0:18,0:18:51.15:0,51,1255	0/0:23,0:23:60.20:0,60,1535	0/0:25,0:25:63.22:0,63,1611	0/0:6,0:6:18.06:0,18,479
chr10	67407980	.	C	CTTATTTAT	1345.28	PASS	AB=1.000;AC=8;AF=0.143;AN=56;BaseQRankSum=1.739;DP=491;FS=0.823;HRun=0;HaplotypeScore=136.1157;InbreedingCoeff=0.5483;MQ=63.29;MQ0=0;MQRankSum=-4.090;QD=17.03;ReadPosRankSum=-4.152;VQSLOD=1.7015;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,9:19:12.04:464,12,0	1/1:3,0:3:5.98:135,6,0	0/0:8,0:8:5.91:0,6,39	0/0:9,0:7:11.91:0,12,132	0/1:17,0:17:99:742,0,181	0/0:25,0:25:20.22:0,20,187	0/0:26,0:26:37:0,37,532	0/0:31,0:31:57.15:0,57,850	0/0:15,0:15:19.99:0,20,180	0/1:19,0:19:12.77:13,0,233	0/0:36,0:36:23.15:0,23,562	0/0:17,0:16:19.12:0,19,255	0/0:15,0:15:45.14:0,45,995	0/0:15,0:15:10.50:0,11,107	0/0:13,0:13:17.77:0,18,253	0/0:18,0:18:36.12:0,36,843	1/1:3,15:21:3.01:125,3,0	0/0:12,0:12:13.28:0,13,112	0/0:20,0:20:23.20:0,23,270	0/0:24,0:24:23.49:0,23,476	0/0:15,0:15:21.11:0,21,272	0/0:11,0:11:24.08:0,24,561	0/0:15,0:15:36.11:0,36,785	0/0:11,0:11:18.06:0,18,402	0/0:15,0:15:20.18:0,20,234	0/0:26,0:26:33.92:0,34,350	0/0:20,0:19:20.55:0,21,224	0/0:15,0:15:19.49:0,19,284
chr10	67407996	.	T	TTTAG	9924.19	PASS	AB=1.000;AC=38;AF=0.679;AN=56;BaseQRankSum=-8.037;DP=524;FS=3.838;HRun=0;HaplotypeScore=71.0735;InbreedingCoeff=0.7387;MQ=59.63;MQ0=1;MQRankSum=0.600;QD=24.94;ReadPosRankSum=4.145;VQSLOD=4.0389;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:20,0:19:70.92:71,0,149	1/1:0,0:3:3.01:58,3,0	0/0:11,0:9:14.97:0,15,133	0/0:9,0:7:2.96:0,3,24	1/1:6,0:20:33.08:523,33,0	1/1:6,19:25:39.13:936,39,0	1/1:13,10:23:16.30:362,16,0	0/0:33,0:33:33.04:0,33,322	1/1:5,15:20:30.10:718,30,0	1/1:6,19:27:68.93:1208,69,0	1/1:15,15:31:42.31:825,42,0	1/1:6,14:20:18.06:432,18,0	0/0:19,0:19:42.09:0,42,582	1/1:3,10:14:18.06:432,18,0	1/1:6,12:19:12.04:288,12,0	0/0:14,0:14:33.10:0,33,486	0/1:20,0:20:44.14:74,0,44	1/1:5,11:17:9.03:216,9,0	1/1:9,8:19:30.02:526,30,0	1/1:12,11:23:30.03:664,30,0	1/1:6,6:12:12.04:288,12,0	0/0:12,0:12:27.05:0,27,363	0/0:18,0:18:39.06:0,39,509	0/0:10,0:10:21.04:0,21,266	1/1:5,12:18:15.05:360,15,0	1/1:7,20:28:63.13:1297,63,0	1/1:7,20:28:20.74:503,21,0	1/1:7,3:10:6.02:144,6,0
chr10	67408616	.	AACAC	A	445.75	PASS	AB=0.976;AC=17;AF=0.425;AN=40;BaseQRankSum=0.515;DP=438;FS=13.652;HRun=0;HaplotypeScore=74.4189;InbreedingCoeff=0.4437;MQ=72.73;MQ0=7;MQRankSum=-0.604;QD=3.48;ReadPosRankSum=1.616;VQSLOD=0.6304;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:6.02:0,6,114	0/0:8,0:8:3.01:0,3,51	./.	./.	0/0:11,0:12:17.78:0,18,288	1/1:20,0:20:2.96:20,3,0	0/0:12,0:12:0.94:0,1,2	./.	1/1:8,2:11:9.02:120,9,0	./.	0/1:14,0:13:0:0,0,0	0/0:13,0:13:0.47:0,0,1	0/0:12,0:12:15.05:0,15,306	./.	1/1:11,2:15:15.04:193,15,0	1/1:7,1:11:6.01:74,6,0	0/0:26,0:26:33.07:0,33,520	0/0:14,0:14:3.48:0,3,37	./.	./.	0/1:18,0:18:7.46:40,0,7	0/1:12,1:13:36.82:37,0,119	0/0:16,0:16:12.04:0,12,222	0/0:28,0:27:23.81:0,24,389	1/1:11,0:11:0.47:1,0,0	./.	1/1:10,1:11:3.01:46,3,0	1/1:2,2:4:3.01:46,3,0
chr10	67410706	.	A	AG	645.41	PASS	AB=0.780;AC=7;AF=0.125;AN=56;BaseQRankSum=0.647;DP=541;FS=2.288;HRun=10;HaplotypeScore=74.9227;InbreedingCoeff=0.2607;MQ=77.49;MQ0=0;MQRankSum=-0.916;QD=6.79;ReadPosRankSum=-0.809;VQSLOD=1.6809;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:18,14:32:78.29:202,0,78	0/1:8,0:8:17.99:39,0,18	0/0:24,0:24:4.92:0,5,161	0/0:15,0:13:5.52:0,6,50	0/1:6,10:16:30.43:153,0,30	0/0:23,0:25:45.99:0,46,352	0/0:24,0:24:55.95:0,56,445	0/0:17,0:17:17.91:0,18,145	0/0:17,0:18:46.99:0,47,375	0/0:17,0:19:36.98:0,37,282	0/0:13,0:13:26.94:0,27,219	0/0:17,0:19:46.97:0,47,374	0/0:17,0:18:31.99:0,32,251	0/0:16,0:18:37.48:0,37,282	0/0:22,0:23:52.89:0,53,414	0/0:27,0:30:66.95:0,67,524	1/1:12,4:16:27.51:267,28,0	0/1:3,7:10:3.67:113,0,4	0/0:9,0:12:24.41:0,24,169	0/0:18,0:19:40.95:0,41,324	0/0:33,0:36:38.94:0,39,493	0/0:20,0:21:32.71:0,33,242	0/1:13,0:13:0.65:1,0,185	0/0:31,1:32:74.85:0,75,609	0/0:10,1:11:20.95:0,21,172	0/0:21,0:22:43.61:0,44,333	0/0:18,0:20:48.97:0,49,376	0/0:9,0:9:22.77:0,23,173
chr10	67412280	.	C	CT	385.73	PASS	AC=8;AF=0.148;AN=54;BaseQRankSum=-2.523;DP=233;FS=0.000;HRun=1;HaplotypeScore=36.5659;InbreedingCoeff=0.6348;MQ=74.15;MQ0=3;MQRankSum=-0.328;QD=11.69;ReadPosRankSum=-2.871;VQSLOD=0.6817;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,1:10:3.43:71,3,0	1/1:2,0:2:6:52,6,0	0/0:27,0:13:27.39:0,27,247	0/0:21,0:9:13.22:0,13,112	1/1:5,0:5:5.99:49,6,0	0/0:16,0:16:35.69:0,36,316	0/0:12,0:12:13.15:0,13,214	1/1:16,0:16:38.82:347,39,0	0/0:5,0:5:6:0,6,54	0/0:5,0:5:5.93:0,6,56	0/0:4,0:4:8.98:0,9,74	0/0:11,0:10:18.07:0,18,153	0/0:4,0:4:11.96:0,12,96	0/0:5,0:5:15.01:0,15,145	0/0:10,0:10:16.26:0,16,148	0/0:6,0:6:17.69:0,18,141	./.	0/0:7,0:7:18.42:0,18,164	0/0:8,0:8:24.01:0,24,215	0/0:5,0:5:8.96:0,9,69	0/0:8,0:8:20.95:0,21,174	0/0:3,0:3:3:0,3,26	0/0:4,0:4:4.12:0,4,18	0/0:2,0:2:5.96:0,6,45	0/0:4,0:4:5.96:0,6,46	0/0:10,0:10:23.99:0,24,209	0/0:8,0:8:20.73:0,21,160	0/0:2,0:2:2.13:0,2,5
chr10	67418132	.	C	CT	593.93	PASS	AC=10;AF=0.192;AN=52;BaseQRankSum=1.824;DP=247;FS=3.743;HRun=1;HaplotypeScore=49.2167;InbreedingCoeff=0.6235;MQ=57.18;MQ0=25;MQRankSum=-3.105;QD=6.91;ReadPosRankSum=2.331;VQSLOD=1.0057;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:18:7.11:109,7,0	1/1:7,1:7:20.87:158,21,0	0/0:40,0:15:23.72:0,24,327	0/0:36,0:12:16.43:0,16,151	1/1:14,7:15:9:84,9,0	0/0:3,0:3:1.69:0,2,5	0/0:3,0:3:3.87:0,4,25	1/1:21,0:17:39.08:279,39,0	0/0:6,0:5:11.90:0,12,89	0/0:3,0:3:5.98:0,6,47	0/0:4,0:4:2.90:0,3,16	0/0:1,0:1:2.04:0,2,6	0/0:7,0:5:5.46:0,5,25	./.	0/0:4,0:4:11.10:0,11,67	0/0:6,0:5:14.82:0,15,110	1/1:13,3:14:17.75:118,18,0	0/0:2,0:2:5.99:0,6,49	0/0:2,0:2:5.94:0,6,42	./.	0/0:4,0:3:5.78:0,6,42	0/0:5,0:5:8.71:0,9,57	0/0:8,0:8:11.84:0,12,88	0/0:4,0:4:8.87:0,9,67	0/0:2,0:2:2.90:0,3,16	0/0:8,0:6:15.21:0,15,102	0/0:6,0:6:14.96:0,15,120	0/0:3,0:2:2.97:0,3,20
chr10	67418139	.	C	CTGTCTCTCTCTCTCT	1079.72	PASS	AB=0.815;AC=10;AF=0.192;AN=52;BaseQRankSum=-1.413;DP=245;FS=20.820;HRun=0;HaplotypeScore=85.5707;InbreedingCoeff=0.3632;MQ=52.15;MQ0=49;MQRankSum=-3.030;QD=15.00;ReadPosRankSum=3.480;VQSLOD=0.1375;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:16:0:0,0,1	1/1:6,0:6:11.85:134,12,0	0/0:37,0:12:27.91:0,28,415	0/0:32,0:9:12.72:0,13,172	1/1:18,0:12:2.71:12,3,0	0/0:5,0:4:0.04:0,0,0	1/1:4,0:2:2.22:7,2,0	1/1:22,0:15:37.93:593,38,0	0/0:3,0:2:3.01:0,3,33	0/0:3,0:2:6.02:0,6,102	0/0:4,0:3:2.69:0,3,25	0/0:2,0:2:4.20:0,4,22	0/0:12,0:7:6.01:0,6,71	./.	0/0:6,0:5:9.93:0,10,135	0/0:3,0:2:6.02:0,6,156	0/1:7,6:15:35.41:459,0,35	0/0:3,0:2:6:0,6,70	0/0:3,0:2:1.25:0,1,3	./.	0/0:6,0:3:3.88:0,4,27	0/0:6,0:6:9.02:0,9,121	0/0:7,0:7:9:0,9,131	0/1:4,0:4:1.18:1,0,112	0/0:3,0:2:2.51:0,3,37	0/0:5,0:2:6.02:0,6,77	0/0:4,0:2:6.01:0,6,61	0/0:6,0:2:6.01:0,6,74
chr10	67418267	.	T	TTGTGAGACTAAGG	5224.35	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-2.100;DP=493;FS=0.000;HRun=0;HaplotypeScore=172.6147;InbreedingCoeff=0.9837;MQ=87.39;MQ0=0;MQRankSum=-8.767;QD=98.57;ReadPosRankSum=-0.863;VQSLOD=4.6159;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:14,8:23:42.14:2264,42,0	1/1:6,4:12:21.03:1149,21,0	0/0:17,0:17:12.12:0,12,649	0/0:20,0:21:38.15:0,38,1050	0/0:31,0:31:78.25:0,78,2737	0/0:19,0:19:54.17:0,54,1885	0/0:16,0:16:45.15:0,45,1582	0/0:21,0:21:48.15:0,48,1550	0/0:12,0:12:33.07:0,33,1113	0/0:12,0:12:27.09:0,27,1002	0/0:11,0:11:33.09:0,33,1082	0/0:19,0:19:45.14:0,45,1605	0/0:16,0:16:48.15:0,48,1666	0/0:16,0:16:45.15:0,45,1643	0/0:14,0:14:36.12:0,36,1232	0/0:24,0:24:57.20:0,57,2003	1/1:9,8:18:33.07:1811,33,0	0/0:13,0:13:27.07:0,27,873	0/0:18,0:18:44.82:0,45,1292	0/0:18,0:18:45.13:0,45,1547	0/0:29,0:29:78.27:0,78,2762	0/0:12,0:12:33.11:0,33,1102	0/0:28,0:28:63.21:0,63,2302	0/0:24,0:24:63.17:0,63,2235	0/0:16,0:16:45.15:0,45,1573	0/0:12,0:12:36.12:0,36,1311	0/0:15,0:14:33.11:0,33,1109	0/0:6,0:6:18.06:0,18,686
chr10	67419492	.	TA	T	1694.12	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=8.702;DP=603;FS=7.643;HRun=10;HaplotypeScore=63.8801;InbreedingCoeff=0.9947;MQ=81.22;MQ0=0;MQRankSum=-2.127;QD=18.62;ReadPosRankSum=-0.019;VQSLOD=4.2867;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,31:33:83.90:720,84,0	1/1:0,6:6:15:130,15,0	0/0:22,0:22:29.66:0,30,263	0/0:23,0:22:28.55:0,29,320	0/0:29,0:29:75.17:0,75,812	0/0:26,0:26:75.19:0,75,821	0/0:17,0:17:45.09:0,45,479	1/1:8,21:29:40.24:487,40,0	0/0:21,1:22:40.18:0,40,655	0/0:24,0:24:60.16:0,60,656	0/0:12,0:12:33.09:0,33,363	0/0:27,0:27:72.01:0,72,769	0/0:17,0:17:45.11:0,45,489	0/0:26,0:26:68.90:0,69,725	0/0:30,2:32:58.15:0,58,853	0/0:24,0:25:72.03:0,72,777	1/1:3,20:23:59.96:516,60,0	0/0:15,0:15:42.11:0,42,465	0/0:14,0:15:41.92:0,42,430	0/0:18,0:18:51.14:0,51,564	0/0:20,0:20:51.14:0,51,564	0/0:22,0:22:57.14:0,57,620	0/0:26,0:26:72.14:0,72,767	0/0:26,0:26:75.16:0,75,803	0/0:16,0:16:45.09:0,45,480	0/0:18,0:18:51.11:0,51,548	0/0:25,0:25:66.12:0,66,695	0/0:8,0:9:26.91:0,27,280
chr10	67422866	.	G	GCTCA	293.62	PASS	AB=0.948;AC=6;AF=0.111;AN=54;BaseQRankSum=5.548;DP=530;FS=2.218;HRun=0;HaplotypeScore=103.6424;InbreedingCoeff=0.5403;MQ=52.48;MQ0=14;MQRankSum=-3.643;QD=4.74;ReadPosRankSum=-2.884;VQSLOD=1.0801;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:19,0:18:8.08:73,0,8	1/1:5,1:8:5.95:72,6,0	0/0:9,0:1:2.68:0,3,11	./.	0/0:16,0:16:36.07:0,36,551	0/0:14,0:14:27.08:0,27,478	0/0:44,0:43:99:0,102,1666	0/1:16,0:15:32.17:105,0,32	0/0:10,0:9:21.06:0,21,350	0/0:33,0:32:87.07:0,87,1291	0/0:19,0:19:36.10:0,36,554	0/0:23,0:23:51.83:0,52,833	0/0:15,0:14:36.12:0,36,625	0/0:22,0:21:19.11:0,19,244	0/0:14,0:13:27.09:0,27,478	0/0:12,0:10:20.90:0,21,350	1/1:8,4:16:8.99:165,9,0	0/0:25,0:24:69.21:0,69,1175	0/0:18,0:16:45.14:0,45,710	0/0:15,0:15:39.10:0,39,569	0/0:61,0:58:99:0,159,2416	0/0:13,0:13:24.07:0,24,371	0/0:13,0:13:33.08:0,33,533	0/0:32,0:31:72.25:0,72,1320	0/0:18,0:18:48.16:0,48,876	0/0:15,0:14:36.03:0,36,547	0/0:10,0:10:27.07:0,27,421	0/0:11,0:11:21.07:0,21,334
chr10	67422868	.	G	GCA	444.36	PASS	AB=1.000;AC=13;AF=0.250;AN=52;BaseQRankSum=3.474;DP=520;FS=0.814;HRun=0;HaplotypeScore=84.3957;InbreedingCoeff=0.5731;MQ=50.38;MQ0=21;MQRankSum=-3.477;QD=3.58;ReadPosRankSum=-2.520;VQSLOD=1.8928;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:20:5.97:46,6,0	1/1:7,0:6:3:26,3,0	./.	./.	0/0:14,0:14:3.10:0,3,148	0/0:12,0:14:20.72:0,21,200	0/0:40,0:43:56.49:0,56,547	1/1:17,0:15:20.75:169,21,0	0/0:10,0:9:14.60:0,15,150	0/0:32,0:31:10.48:0,10,417	0/0:18,0:18:12.01:0,12,124	0/0:23,0:23:38.81:0,39,403	0/0:13,0:12:27.06:0,27,299	1/1:9,12:20:4.66:217,5,0	0/0:15,0:14:17.72:0,18,183	0/0:11,0:9:12.03:0,12,137	1/1:17,0:17:13.99:103,14,0	0/0:25,0:24:48.03:0,48,513	0/0:17,0:15:30.81:0,31,301	0/0:14,0:14:23.76:0,24,215	0/0:59,0:56:72.72:0,73,813	0/1:11,0:11:10.96:11,0,60	0/1:13,0:13:25.60:26,0,135	0/0:29,0:30:48.13:0,48,544	0/0:18,0:18:39.02:0,39,408	0/1:15,0:14:2.06:2,0,139	0/0:9,0:9:17.86:0,18,173	0/0:8,0:8:14.99:0,15,138
chr10	67423309	.	GGTGT	G	1221.81	PASS	AB=0.893;AC=32;AF=0.762;AN=42;BaseQRankSum=3.577;DP=418;FS=2.457;HRun=0;HaplotypeScore=61.6717;InbreedingCoeff=0.3668;MQ=37.21;MQ0=97;MQRankSum=-1.516;QD=5.34;ReadPosRankSum=-0.217;VQSLOD=1.0207;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	1/1:6,0:6:3.01:42,3,0	./.	./.	1/1:8,0:10:6.01:56,6,0	1/1:13,6:16:6.02:92,6,0	1/1:12,5:16:5.23:218,5,0	./.	1/1:6,2:8:2.97:20,3,0	1/1:11,4:14:7.23:85,7,0	1/1:4,4:8:3.01:46,3,0	1/1:7,5:12:8.94:138,9,0	0/0:11,0:12:20.54:0,21,316	1/1:8,3:10:2.58:46,3,0	1/1:2,3:5:9.02:120,9,0	1/1:3,4:6:5.99:67,6,0	./.	0/1:18,1:14:6.39:40,0,6	./.	1/1:5,1:6:3.01:46,3,0	0/1:43,7:38:51.39:84,0,51	0/0:10,0:10:15.04:0,15,246	0/0:13,0:13:6.02:0,6,140	0/0:17,0:16:8.77:0,9,153	1/1:6,5:11:6.02:92,6,0	./.	1/1:11,1:11:6.01:74,6,0	1/1:8,2:9:5.92:92,6,0
chr10	67425092	.	C	CT	836.30	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=-0.684;DP=286;FS=7.239;HRun=1;HaplotypeScore=41.8921;InbreedingCoeff=0.7006;MQ=88.97;MQ0=4;MQRankSum=3.096;QD=9.29;ReadPosRankSum=-0.572;VQSLOD=0.5546;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:11:23.95:194,24,0	1/1:2,0:2:2.67:25,3,0	0/0:35,0:19:26.51:0,27,220	0/1:33,0:19:19.90:20,0,52	1/1:10,0:10:20.72:165,21,0	0/0:1,0:2:2.90:0,3,24	0/0:14,0:14:35.84:0,36,278	1/1:6,19:25:59.99:490,60,0	0/0:12,0:12:23.92:0,24,189	0/0:8,0:8:20.89:0,21,170	0/0:4,0:4:2.99:0,3,24	0/0:12,0:12:34.35:0,34,255	0/0:11,0:11:32.85:0,33,259	0/0:9,0:9:23.78:0,24,176	0/0:8,0:9:20.49:0,20,148	0/0:6,0:7:14.98:0,15,123	1/1:9,0:9:14.89:109,15,0	0/0:5,0:5:14.87:0,15,107	0/0:9,0:10:21.48:0,21,188	0/0:4,0:4:11.93:0,12,90	0/0:10,0:10:20.98:0,21,175	0/0:4,0:4:9:0,9,80	0/0:1,0:2:2.17:0,2,7	0/0:8,0:9:17.53:0,18,143	0/0:6,0:6:11.98:0,12,99	0/0:10,0:10:20.04:0,20,165	0/0:9,0:9:23.93:0,24,190	0/0:3,0:3:8.95:0,9,68
chr10	67426894	.	TAC	T	1489.01	PASS	AB=0.922;AC=34;AF=0.654;AN=52;BaseQRankSum=3.806;DP=582;FS=15.694;HRun=0;HaplotypeScore=83.3981;InbreedingCoeff=-0.1613;MQ=59.73;MQ0=22;MQRankSum=-0.194;QD=2.88;ReadPosRankSum=-1.838;VQSLOD=0.6324;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:42,0:40:5.32:5,0,16	0/1:6,0:5:14.13:18,0,14	0/1:40,0:15:0:0,0,0	./.	1/1:12,0:16:5.55:28,6,0	1/1:12,6:20:14.70:125,15,0	1/1:20,6:27:14.54:143,15,0	./.	0/1:11,10:21:8.83:113,0,9	0/1:12,0:12:22.98:56,0,23	1/1:8,6:14:5.91:64,6,0	0/1:20,5:25:1.06:174,0,1	0/1:16,1:17:22.64:23,0,115	0/1:19,4:23:11.97:80,0,12	1/1:10,6:17:11.83:111,12,0	1/1:6,8:14:6.02:64,6,0	0/1:23,0:23:14.03:18,0,14	1/1:14,0:18:5.44:30,5,0	0/1:15,1:17:4.40:89,0,4	1/1:11,4:16:5.95:64,6,0	0/1:53,2:53:7.53:115,0,8	0/0:13,0:13:3.58:0,4,159	0/0:13,0:13:6.02:0,6,86	0/1:37,2:39:52.34:52,0,304	0/1:9,0:12:5.35:5,0,29	1/1:16,0:18:4.04:74,4,0	1/1:12,4:15:9.02:97,9,0	0/1:7,0:7:32.10:84,0,32
chr10	67426937	.	ACACACT	A	1239.41	PASS	AB=1.000;AC=8;AF=0.143;AN=56;BaseQRankSum=8.285;DP=725;FS=16.607;HRun=0;HaplotypeScore=151.6117;InbreedingCoeff=0.6716;MQ=58.79;MQ0=13;MQRankSum=0.529;QD=9.76;ReadPosRankSum=-1.419;VQSLOD=1.7958;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:40,2:41:71.63:538,72,0	1/1:11,1:11:26.90:301,27,0	0/0:31,0:13:39.02:0,39,384	0/0:38,0:21:55.66:0,56,487	0/1:19,0:19:45.58:46,0,210	0/0:25,0:25:41.74:0,42,453	0/0:20,0:20:39.65:0,40,411	0/1:28,0:27:99:250,0,141	0/0:27,0:27:50.82:0,51,613	0/0:29,0:29:56.69:0,57,718	0/0:13,0:13:20.99:0,21,249	0/0:26,0:26:59.79:0,60,652	0/0:18,0:18:44.98:0,45,786	0/0:28,0:28:49.86:0,50,512	0/0:21,0:21:47.49:0,47,490	0/0:28,0:28:56.39:0,56,654	1/1:9,17:26:19.21:258,19,0	0/0:21,0:21:4.15:0,4,234	0/0:17,0:17:41.76:0,42,458	0/0:24,0:24:35.13:0,35,353	0/0:73,0:70:99:0,134,1374	0/0:28,0:28:54:0,54,861	0/0:16,0:16:26.87:0,27,527	0/0:46,0:45:98.88:0,99,1823	0/0:11,0:11:17.66:0,18,136	0/0:25,0:25:59.15:0,59,536	0/0:17,0:15:39.05:0,39,493	0/0:16,0:16:45.06:0,45,653
chr10	67426941	.	ACT	A	1107.94	PASS	AB=0.992;AC=15;AF=0.268;AN=56;BaseQRankSum=11.659;DP=712;FS=65.537;HRun=0;HaplotypeScore=104.3433;InbreedingCoeff=0.2519;MQ=60.06;MQ0=11;MQRankSum=0.978;QD=3.93;ReadPosRankSum=-2.494;VQSLOD=-0.5598;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:39,0:39:74.65:566,75,0	1/1:11,0:11:23.87:182,24,0	0/0:32,0:14:42.02:0,42,411	0/0:39,0:22:55.66:0,56,487	0/0:19,0:19:38.23:0,38,281	0/0:26,0:26:22.09:0,22,258	0/0:19,0:19:7.44:0,7,208	0/1:31,0:30:92.95:332,0,93	0/1:26,1:27:10.82:11,0,263	0/1:27,0:27:2.34:2,0,392	0/1:13,0:13:4.52:5,0,100	0/1:26,0:26:35.88:36,0,282	0/0:17,0:17:13.21:0,13,318	0/1:28,1:29:6.83:7,0,312	0/0:22,0:22:29.43:0,29,340	0/0:28,0:28:43.25:0,43,416	1/1:21,0:21:17.67:117,18,0	0/0:22,0:22:44.61:0,45,293	0/1:20,0:20:4.70:5,0,290	0/1:21,0:21:1.55:2,0,202	0/0:64,1:63:11.55:0,12,819	0/0:30,0:30:34.89:0,35,521	0/0:14,3:17:29.99:0,30,313	0/0:43,0:42:36.93:0,37,779	0/0:12,0:12:8.69:0,9,126	0/0:22,0:22:11.60:0,12,344	0/1:17,0:16:4.61:5,0,229	0/0:17,0:17:11.65:0,12,275
chr10	67426943	.	T	TCA	2271.53	PASS	AB=0.952;AC=7;AF=0.125;AN=56;BaseQRankSum=-0.719;DP=696;FS=19.018;HRun=0;HaplotypeScore=108.9015;InbreedingCoeff=0.9061;MQ=62.58;MQ0=11;MQRankSum=-0.790;QD=22.27;ReadPosRankSum=-1.669;VQSLOD=2.5118;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:38,1:39:71.98:1079,72,0	1/1:11,0:11:23.70:288,24,0	0/0:34,0:16:48.15:0,48,638	0/0:40,0:23:50.93:0,51,767	0/0:19,0:19:41.98:0,42,528	0/0:25,0:25:47.18:0,47,606	0/0:19,0:19:41.46:0,41,549	1/1:10,22:31:63.19:939,63,0	0/0:26,0:26:51.08:0,51,648	0/0:25,0:25:57:0,57,721	0/0:10,0:10:20.96:0,21,279	0/0:26,0:26:60.17:0,60,765	0/0:17,0:17:36.12:0,36,481	0/0:29,0:29:59.79:0,60,733	0/0:23,0:23:60.17:0,60,781	0/0:29,0:29:60.20:0,60,801	0/1:19,1:20:1.34:114,0,1	0/0:20,0:20:42.09:0,42,517	0/0:19,0:19:36.11:0,36,475	0/0:20,0:20:36.12:0,36,478	0/0:63,0:61:99:0,140,1755	0/0:26,0:26:54.16:0,54,702	0/0:17,0:17:30.57:0,31,405	0/0:40,0:39:87.24:0,87,1141	0/0:11,0:11:18.06:0,18,243	0/0:23,0:23:42.13:0,42,571	0/0:16,0:15:42.10:0,42,537	0/0:17,0:17:39.12:0,39,506
chr10	67431346	.	TGC	T	96.57	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=1.580;DP=661;FS=4.995;HRun=0;HaplotypeScore=202.5548;InbreedingCoeff=0.9219;MQ=58.10;MQ0=9;MQRankSum=-0.757;QD=6.44;ReadPosRankSum=-2.554;VQSLOD=2.8737;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:37:11.05:0,11,471	0/0:11,0:11:19.76:0,20,196	0/0:22,0:14:36.12:0,36,687	0/0:26,0:18:52.99:0,53,932	1/1:7,8:15:18.01:187,18,0	0/0:22,0:21:32.77:0,33,349	0/0:25,0:25:52.41:0,52,605	0/0:23,0:22:57.47:0,57,418	0/0:18,0:18:35.73:0,36,315	0/0:23,0:22:58.79:0,59,589	0/0:20,0:20:29.18:0,29,285	0/0:26,0:26:53.78:0,54,528	0/0:17,0:17:47.96:0,48,805	0/0:27,0:26:48.70:0,49,346	0/0:25,0:25:47.80:0,48,377	0/0:18,0:18:45.02:0,45,426	0/0:34,0:34:41.89:0,42,329	0/0:27,0:26:56.44:0,56,587	0/0:10,0:9:17.50:0,18,201	0/0:13,0:13:14.92:0,15,114	0/0:47,0:45:47.90:0,48,576	0/0:27,0:27:72.15:0,72,1250	0/0:21,0:21:63.19:0,63,1118	0/0:33,0:33:96.29:0,96,1788	0/0:27,0:27:20.07:0,20,227	0/0:26,0:25:62.78:0,63,652	0/0:20,0:20:38.06:0,38,300	0/0:21,0:21:46.84:0,47,424
chr10	67431352	.	CGT	C	7092.79	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=9.769;DP=633;FS=1.765;HRun=0;HaplotypeScore=177.0375;InbreedingCoeff=0.9689;MQ=55.08;MQ0=12;MQRankSum=-8.528;QD=18.14;ReadPosRankSum=3.432;VQSLOD=5.1209;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:35.26:0,35,415	0/0:10,0:10:14.90:0,15,160	0/0:21,0:13:35.67:0,36,506	0/0:24,0:16:29.81:0,30,582	1/1:15,0:15:5.74:37,6,0	1/1:3,16:18:21.04:226,21,0	1/1:12,11:23:47.96:553,48,0	0/0:20,0:18:15.69:0,16,111	1/1:2,14:16:36.04:375,36,0	1/1:8,17:23:48.72:712,49,0	1/1:2,17:19:17.94:200,18,0	1/1:8,19:27:54.95:603,55,0	0/0:22,0:22:60.16:0,60,963	1/1:3,21:23:42.09:443,42,0	1/1:2,22:24:44.12:441,44,0	1/1:3,14:17:45.04:499,45,0	0/0:31,0:31:15.13:0,15,112	1/1:14,13:26:23.25:477,23,0	1/1:4,5:8:14.93:158,15,0	1/1:0,13:13:15.04:177,15,0	1/1:21,21:39:24.03:284,24,0	0/0:26,0:26:66.23:0,66,1150	0/0:21,0:21:53.96:0,54,880	0/0:34,0:34:90.28:0,90,1528	1/1:1,23:24:21.06:238,21,0	1/1:7,18:23:60.15:701,60,0	1/1:4,16:20:37.83:407,38,0	1/1:5,17:22:51.98:562,52,0
chr10	67431358	.	TGC	T	4332.90	PASS	AB=1.000;AC=36;AF=0.643;AN=56;BaseQRankSum=11.851;DP=649;FS=1.721;HRun=0;HaplotypeScore=198.6523;InbreedingCoeff=0.8422;MQ=52.80;MQ0=13;MQRankSum=-10.149;QD=10.37;ReadPosRankSum=3.762;VQSLOD=4.4657;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:46.34:0,46,359	0/0:11,0:11:9.60:0,10,68	0/0:20,0:12:20.19:0,20,348	0/0:21,0:13:25.27:0,25,376	0/1:14,0:14:3.90:17,0,4	1/1:16,0:15:20.65:146,21,0	1/1:22,1:23:44.12:320,44,0	0/1:20,0:18:22.73:139,0,23	1/1:18,0:18:35.31:242,35,0	1/1:27,0:25:71.34:465,71,0	1/1:18,0:18:20.52:132,21,0	1/1:26,3:29:60.15:351,60,0	0/0:24,0:24:66.16:0,66,1140	1/1:27,0:26:41.07:246,41,0	1/1:22,2:24:43.38:249,43,0	1/1:17,0:17:40.87:239,41,0	0/0:29,0:29:8.08:0,8,48	1/1:27,0:26:43.23:324,43,0	1/1:11,0:9:17.62:128,18,0	1/1:14,0:14:17.70:114,18,0	1/1:44,0:41:20.33:116,20,0	0/0:30,0:30:78.15:0,78,1308	0/0:19,0:19:48.04:0,48,924	0/0:33,0:33:81.53:0,82,1578	1/1:24,0:24:23.56:153,24,0	1/1:23,0:21:58.55:381,59,0	1/1:16,3:19:38.09:255,38,0	1/1:17,6:23:52.02:316,52,0
chr10	67431360	.	CGTGT	C	8854.56	PASS	AB=1.000;AC=37;AF=0.661;AN=56;BaseQRankSum=10.055;DP=659;FS=0.000;HRun=0;HaplotypeScore=200.8805;InbreedingCoeff=0.7711;MQ=50.50;MQ0=13;MQRankSum=-5.848;QD=18.60;ReadPosRankSum=4.573;VQSLOD=4.3756;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:44,0:44:85.86:157,0,86	0/1:12,0:12:2.13:166,0,2	0/0:20,0:10:12.36:0,12,150	0/0:19,0:11:18.03:0,18,208	0/0:16,0:16:3.35:0,3,16	1/1:6,10:15:21.07:296,21,0	1/1:24,3:27:32.74:413,33,0	0/0:21,0:19:27.57:0,28,199	1/1:9,11:20:33.11:455,33,0	1/1:19,8:25:28.02:699,28,0	1/1:8,10:18:20.76:306,21,0	1/1:20,9:29:62.91:777,63,0	0/0:24,0:24:69.24:0,69,1624	1/1:12,17:28:39.13:560,39,0	1/1:6,19:25:48.08:667,48,0	1/1:9,7:16:37:525,37,0	0/1:31,0:31:4.27:236,0,4	1/1:19,7:25:29.91:582,30,0	1/1:9,3:10:17.92:184,18,0	1/1:9,5:14:18.06:270,18,0	1/1:39,3:39:21.06:302,21,0	0/0:31,0:31:77.79:0,78,1641	0/0:19,0:19:54.17:0,54,1118	0/0:33,0:33:87.05:0,87,1901	1/1:11,13:24:24.08:346,24,0	1/1:13,9:20:57.97:764,58,0	1/1:12,7:19:29.80:444,30,0	1/1:11,12:23:53.50:704,53,0
chr10	67431364	.	T	TGC	1840.62	PASS	AB=0.889;AC=22;AF=0.393;AN=56;BaseQRankSum=5.858;DP=673;FS=28.521;HRun=0;HaplotypeScore=214.0554;InbreedingCoeff=0.2771;MQ=47.89;MQ0=15;MQRankSum=-9.256;QD=5.21;ReadPosRankSum=1.708;VQSLOD=1.7129;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:46:45.74:0,46,311	0/0:10,0:13:19.21:0,19,119	0/0:17,0:7:21.07:0,21,285	0/0:17,0:8:24.05:0,24,306	0/0:14,0:14:5.99:0,6,49	1/1:18,0:17:0.48:72,0,0	0/1:14,10:26:33.06:135,0,33	0/0:22,0:19:43.50:0,43,275	0/1:15,5:20:3.87:58,0,4	0/1:27,2:27:5.85:290,0,6	1/1:20,0:20:5.32:56,5,0	0/1:27,1:28:6.21:318,0,6	0/0:27,0:27:75.02:0,75,1101	1/1:22,7:28:16.15:42,16,0	1/1:26,0:26:22.76:155,23,0	0/1:15,0:15:11.75:49,0,12	0/0:26,0:33:30.69:0,31,187	0/1:16,12:27:17.29:167,0,17	0/1:9,3:10:3.52:123,0,4	0/1:11,0:11:3.82:51,0,4	0/0:28,17:42:9.42:0,9,30	0/0:33,0:33:84.69:0,85,1193	0/0:18,0:18:53.21:0,53,782	0/0:35,0:35:99:0,99,1369	1/1:21,0:21:3.33:56,3,0	1/1:26,0:24:4.85:181,5,0	0/1:21,0:21:20.81:81,0,21	0/1:23,0:23:0.72:181,0,1
chr10	67431374	.	TGC	T	1718.88	PASS	AB=1.000;AC=25;AF=0.446;AN=56;BaseQRankSum=5.600;DP=701;FS=2.315;HRun=0;HaplotypeScore=206.2793;InbreedingCoeff=-0.0758;MQ=45.71;MQ0=18;MQRankSum=0.033;QD=3.47;ReadPosRankSum=-3.802;VQSLOD=2.0124;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:28,15:43:39.61:481,40,0	1/1:5,8:13:16.27:142,16,0	0/1:13,0:4:1.77:2,0,30	0/0:16,0:6:5.90:0,6,55	1/1:13,0:13:5.98:47,6,0	0/1:18,0:17:26.93:27,0,175	0/1:28,0:28:99:123,0,133	1/1:26,0:23:35.94:234,36,0	0/0:25,0:25:10.03:0,10,243	0/1:28,0:26:37.31:37,0,446	0/1:20,0:20:11.55:12,0,187	0/1:33,0:33:50.72:51,0,394	0/0:28,0:28:81.20:0,81,1442	0/0:31,0:30:18.75:0,19,248	0/1:28,0:28:1.08:1,0,290	0/1:20,0:20:58.89:59,0,255	1/1:7,23:30:26.85:249,27,0	0/1:32,0:31:59.59:60,0,442	0/0:14,0:12:5.37:0,5,157	0/1:14,0:14:39.21:39,0,180	0/1:50,0:46:44.24:44,0,134	0/0:35,0:35:63.97:0,64,1424	0/0:22,0:22:58.64:0,59,943	0/0:35,0:35:84.37:0,84,1399	0/1:18,0:18:13.02:13,0,44	0/1:25,0:23:99:128,0,224	0/1:18,0:18:85.61:86,0,112	0/1:25,0:25:62.44:62,0,219
chr10	67431376	.	CGT	C	201.79	PASS	AB=0.978;AC=8;AF=0.143;AN=56;BaseQRankSum=4.268;DP=695;FS=0.673;HRun=0;HaplotypeScore=208.8730;InbreedingCoeff=0.1876;MQ=46.17;MQ0=17;MQRankSum=-0.708;QD=1.13;ReadPosRankSum=0.955;VQSLOD=2.7123;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:40,0:40:19.75:143,0,20	0/1:12,0:12:6.22:40,0,6	0/0:12,0:4:3.01:0,3,44	0/0:16,0:5:8.99:0,9,103	0/0:13,0:13:0.47:0,0,1	0/0:19,0:18:29.34:0,29,277	0/1:28,1:29:12.72:13,0,213	0/0:25,0:22:22.23:0,22,144	0/0:23,0:23:44.17:0,44,405	0/0:28,0:26:64.36:0,64,662	0/1:19,1:20:6.79:7,0,216	0/0:29,1:30:56.19:0,56,586	0/0:28,0:28:77.63:0,78,1213	0/0:30,1:30:11.50:0,12,320	0/1:28,0:28:14.45:14,0,408	0/0:20,0:20:40.74:0,41,414	1/1:31,0:31:19.77:111,20,0	0/0:33,0:32:38.86:0,39,618	0/0:12,0:11:21.33:0,21,176	0/0:15,0:15:26.88:0,27,289	0/0:50,0:46:17.88:0,18,198	0/0:34,3:38:16.16:0,16,1174	0/0:21,0:21:51.10:0,51,739	0/0:34,1:36:49.39:0,49,1172	0/0:18,0:18:16.21:0,16,138	0/0:24,1:23:23.09:0,23,375	0/1:17,1:18:5.55:6,0,224	0/0:24,0:24:43.55:0,44,400
chr10	67431388	.	TGTGTGC	T	960.14	PASS	AB=0.933;AC=9;AF=0.161;AN=56;BaseQRankSum=4.540;DP=688;FS=0.000;HRun=0;HaplotypeScore=227.6668;InbreedingCoeff=0.6387;MQ=47.39;MQ0=14;MQRankSum=-1.579;QD=7.01;ReadPosRankSum=-0.575;VQSLOD=2.4572;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:40,2:42:22.49:246,22,0	0/1:9,3:12:4.35:228,0,4	0/0:18,0:7:18.02:0,18,275	0/0:22,0:13:22.30:0,22,244	1/1:11,1:12:6.01:62,6,0	0/0:20,0:19:36.01:0,36,639	0/0:27,0:27:27.98:0,28,631	0/1:23,0:21:22.49:22,0,72	0/0:25,0:24:25.94:0,26,655	0/0:26,0:24:66.80:0,67,1278	0/1:17,0:17:2.55:3,0,449	0/0:27,0:27:59.62:0,60,1149	0/0:29,0:29:84.21:0,84,2513	0/0:31,0:30:24.01:0,24,752	0/0:30,0:30:54.79:0,55,995	0/0:17,0:17:47.98:0,48,865	1/1:25,6:31:38.36:547,38,0	0/0:30,0:29:65.76:0,66,1259	0/0:17,0:17:16.02:0,16,294	0/0:23,0:23:62.89:0,63,1036	0/0:47,0:43:23.42:0,23,377	0/0:37,0:37:71.10:0,71,2666	0/0:20,0:20:55.35:0,55,1463	0/0:33,0:33:96.18:0,96,2475	0/0:19,0:19:27.90:0,28,416	0/0:17,0:16:27.86:0,28,792	0/0:15,0:15:13.30:0,13,573	0/0:21,0:21:47.99:0,48,808
chr10	67432333	.	TA	T	64.67	PASS	AB=0.869;AC=12;AF=0.214;AN=56;BaseQRankSum=4.636;DP=659;FS=1.015;HRun=17;HaplotypeScore=98.7130;InbreedingCoeff=-0.0417;MQ=67.22;MQ0=6;MQRankSum=0.514;QD=0.29;ReadPosRankSum=3.175;VQSLOD=-0.5751;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:24:25.81:0,26,106	0/0:5,0:9:5.52:0,6,29	0/0:56,0:19:13.49:0,13,104	0/0:41,0:14:13.06:0,13,77	1/1:1,0:26:25.03:84,25,0	0/1:21,2:27:19.17:19,0,169	0/0:9,0:12:22.77:0,23,179	0/0:25,0:29:36.27:0,36,226	0/0:24,2:26:14.64:0,15,284	0/1:17,4:21:20.48:20,0,214	0/0:30,1:32:15.71:0,16,347	0/0:22,0:22:44.80:0,45,343	0/1:12,3:16:9.99:10,0,138	0/1:14,3:17:17.39:17,0,152	0/1:14,3:18:6.55:7,0,149	0/0:16,1:20:23.32:0,23,321	0/0:21,0:29:26.94:0,27,161	0/1:18,4:23:1.15:1,0,145	0/1:20,1:20:5.09:5,0,204	0/0:16,1:18:11.42:0,11,201	0/0:4,0:5:8.76:0,9,53	0/0:20,2:22:16.93:0,17,208	0/0:25,3:27:4.37:0,4,311	0/1:8,2:10:3.59:4,0,161	0/1:16,4:22:30.10:30,0,92	0/0:22,1:24:18.02:0,18,206	0/0:27,1:30:11.10:0,11,260	0/1:16,1:22:8.83:9,0,178
chr10	67432628	.	AC	A	1572.44	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=7.727;DP=583;FS=5.498;HRun=8;HaplotypeScore=68.9154;InbreedingCoeff=0.9759;MQ=70.29;MQ0=1;MQRankSum=-2.187;QD=22.46;ReadPosRankSum=0.818;VQSLOD=4.2362;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,21:26:62.13:585,62,0	1/1:0,12:12:30.05:290,30,0	0/0:27,0:24:54.76:0,55,587	0/0:21,0:14:19.87:0,20,222	0/0:31,0:31:54.03:0,54,651	0/0:26,0:26:75.21:0,75,891	0/0:14,0:14:33.10:0,33,398	0/0:32,0:32:66.20:0,66,793	0/0:9,0:10:29.96:0,30,341	0/0:23,0:23:57.17:0,57,689	0/0:14,0:14:36.11:0,36,435	0/0:22,0:22:54.12:0,54,635	0/0:18,0:18:54.10:0,54,625	0/0:19,0:19:51.16:0,51,614	0/0:18,0:18:54.17:0,54,652	0/0:17,0:17:48.15:0,48,580	1/1:3,29:32:87.14:840,87,0	0/0:28,0:28:52.41:0,52,913	0/0:14,1:15:10.14:0,10,406	0/0:22,0:22:57.64:0,58,678	0/0:36,2:38:73.32:0,73,1153	0/0:19,0:19:54.11:0,54,624	0/0:19,0:19:54.16:0,54,640	0/0:19,0:19:45.14:0,45,544	0/0:18,0:18:51.14:0,51,605	0/0:21,0:21:57.17:0,57,679	0/0:15,0:15:45.14:0,45,543	0/0:7,0:7:15.05:0,15,181
chr10	67432721	.	A	AT	1170.42	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-6.697;DP=546;FS=12.835;HRun=6;HaplotypeScore=53.8191;InbreedingCoeff=0.9944;MQ=81.43;MQ0=0;MQRankSum=-0.236;QD=30.80;ReadPosRankSum=0.217;VQSLOD=3.1390;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:69.15:0,69,704	0/0:13,0:13:33.07:0,33,337	0/0:16,0:17:44.10:0,44,419	0/0:13,0:13:24.04:0,24,239	1/1:2,36:38:99:1265,102,0	0/0:21,0:21:60.08:0,60,593	0/0:14,0:14:39.07:0,39,391	0/0:27,0:27:72.16:0,72,734	0/0:19,0:19:57.13:0,57,581	0/0:22,0:22:60.13:0,60,612	0/0:17,0:17:51.08:0,51,505	0/0:19,0:19:54.12:0,54,551	0/0:10,0:10:24.05:0,24,245	0/0:17,0:17:51.10:0,51,514	0/0:16,0:16:42.09:0,42,429	0/0:17,0:17:48.11:0,48,490	0/0:28,0:28:81.18:0,81,826	0/0:33,0:33:93.21:0,93,949	0/0:20,0:20:51.11:0,51,520	0/0:20,0:20:57.12:0,57,581	0/0:14,0:14:36.08:0,36,367	0/0:18,0:18:51.11:0,51,520	0/0:12,0:11:30.07:0,30,305	0/0:11,0:11:30.07:0,30,306	0/0:23,0:23:69.16:0,69,704	0/0:28,0:28:75.16:0,75,765	0/0:19,0:19:51.08:0,51,505	0/0:15,0:15:42.09:0,42,428
chr10	67434509	.	ATTAGAGTCTC	A	1761.90	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.736;DP=681;FS=32.665;HRun=0;HaplotypeScore=199.9000;InbreedingCoeff=0.9995;MQ=87.21;MQ0=0;MQRankSum=-5.030;QD=70.48;ReadPosRankSum=-1.974;VQSLOD=1.8365;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:84.23:0,84,3913	0/0:10,0:10:30.10:0,30,1618	0/0:21,0:21:47.30:0,47,1856	0/0:30,0:30:81.23:0,81,2979	1/1:0,25:25:69.11:1857,69,0	0/0:21,0:21:63.20:0,63,3034	0/0:18,0:18:54.17:0,54,2597	0/0:27,0:27:78.25:0,78,3293	0/0:39,0:39:99:0,117,5790	0/0:34,0:34:99:0,102,4644	0/0:23,0:23:69.21:0,69,3414	0/0:22,0:22:66.23:0,66,3436	0/0:21,0:21:63.21:0,63,2962	0/0:23,0:23:69.22:0,69,3489	0/0:23,0:23:69.23:0,69,3499	0/0:19,0:19:54.19:0,54,2888	0/0:26,0:25:78.16:0,78,3346	0/0:27,0:27:81.18:0,81,3770	0/0:27,0:27:81.20:0,81,3544	0/0:16,0:16:48.16:0,48,2462	0/0:36,0:36:99:0,108,5497	0/0:26,0:26:75.22:0,75,3442	0/0:25,0:25:72.25:0,72,3743	0/0:20,0:20:60.20:0,60,3086	0/0:15,0:15:45.15:0,45,2429	0/0:29,0:29:87.25:0,87,3835	0/0:26,0:26:72.16:0,72,3420	0/0:23,0:23:69.24:0,69,3704
chr10	67435717	.	T	TA	2595.97	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=0.913;DP=549;FS=0.518;HRun=1;HaplotypeScore=60.9705;InbreedingCoeff=0.9997;MQ=82.96;MQ0=0;MQRankSum=-6.033;QD=43.27;ReadPosRankSum=-0.631;VQSLOD=3.4822;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,20:23:66.21:1029,66,0	1/1:1,10:11:33.11:520,33,0	0/0:16,0:16:39.10:0,39,507	0/0:23,0:23:65.25:0,65,880	0/0:13,0:13:33.10:0,33,443	0/0:13,0:13:39.13:0,39,544	0/0:16,0:16:48.14:0,48,653	0/0:31,0:31:87.26:0,87,1158	0/0:13,0:13:39.11:0,39,526	0/0:31,0:31:90.30:0,90,1255	0/0:20,0:20:57.17:0,57,763	0/0:13,0:13:39.11:0,39,527	0/0:23,0:23:69.22:0,69,948	0/0:19,0:19:57.19:0,57,797	0/0:22,0:22:66.21:0,66,902	0/0:14,0:14:42.14:0,42,586	1/1:3,23:25:75.26:1189,75,0	0/0:28,0:28:81.26:0,81,1115	0/0:21,0:21:60.20:0,60,839	0/0:25,0:25:75.23:0,75,1021	0/0:22,0:22:66.21:0,66,906	0/0:24,0:24:72.23:0,72,984	0/0:20,0:20:54.18:0,54,749	0/0:14,0:14:42.13:0,42,570	0/0:16,0:16:48.16:0,48,671	0/0:18,0:18:54.18:0,54,755	0/0:17,0:17:51.17:0,51,713	0/0:17,0:17:51.17:0,51,713
chr10	67438191	.	CT	C	2333.29	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=5.979;DP=573;FS=8.192;HRun=13;HaplotypeScore=65.5433;InbreedingCoeff=0.9032;MQ=64.93;MQ0=5;MQRankSum=1.388;QD=13.41;ReadPosRankSum=4.210;VQSLOD=3.7890;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,40:45:89.69:858,90,0	1/1:0,7:7:11.55:115,12,0	0/1:26,0:13:0.07:0,0,93	0/0:15,0:9:5.69:0,6,46	1/1:8,19:26:50.96:471,51,0	0/0:14,0:14:33.09:0,33,388	0/0:20,0:20:56.54:0,57,624	1/1:11,17:25:24.98:373,25,0	0/0:23,0:23:50.86:0,51,551	0/0:27,0:27:69.18:0,69,790	0/0:12,0:12:30.56:0,31,361	0/0:12,0:12:21.06:0,21,251	0/0:17,0:17:38.99:0,39,424	0/0:22,0:22:57.08:0,57,617	0/0:22,0:22:59.76:0,60,684	0/0:16,0:16:42.13:0,42,507	1/1:6,34:40:72.09:686,72,0	0/0:29,0:29:65.81:0,66,736	0/0:16,0:16:26.57:0,27,307	0/0:18,0:18:42.09:0,42,474	0/0:21,0:21:16.14:0,16,447	0/0:15,0:15:33.09:0,33,382	0/0:13,0:13:30.07:0,30,341	0/0:19,0:19:42.12:0,42,494	0/0:16,0:16:39.10:0,39,453	0/0:18,0:18:42.12:0,42,489	0/0:26,0:25:65.97:0,66,751	0/0:6,0:7:17.82:0,18,177
chr10	67438737	.	CG	C	1268.46	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=5.396;DP=386;FS=10.495;HRun=5;HaplotypeScore=40.8577;InbreedingCoeff=0.9277;MQ=97.17;MQ0=0;MQRankSum=-4.827;QD=23.06;ReadPosRankSum=0.521;VQSLOD=1.7296;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,12:16:30.08:340,30,0	1/1:0,1:1:3.01:34,3,0	0/0:23,0:23:64.99:0,65,749	0/0:24,0:24:60.13:0,60,705	0/0:13,0:13:39.12:0,39,515	0/0:14,0:14:42.13:0,42,557	0/0:10,0:10:19.40:0,19,306	1/1:2,16:18:45.12:501,45,0	0/0:11,0:11:33.08:0,33,419	0/0:13,0:13:38.69:0,39,438	0/0:10,0:10:24.08:0,24,328	0/0:10,0:10:27.08:0,27,353	0/0:11,0:11:30.07:0,30,364	0/0:10,0:10:24.08:0,24,327	0/0:4,0:4:12.01:0,12,130	0/0:7,0:7:21.01:0,21,222	1/1:1,19:20:48.11:544,48,0	0/0:21,0:21:57.13:0,57,728	0/0:13,0:13:36.12:0,36,491	0/0:4,0:4:12.04:0,12,164	0/0:32,0:32:93.21:0,93,1145	0/0:11,0:11:30.54:0,31,377	0/0:10,0:10:30.06:0,30,384	0/0:21,0:21:57.13:0,57,700	0/0:14,0:14:42.11:0,42,537	0/0:11,0:11:33.05:0,33,415	0/0:21,0:21:57.15:0,57,731	0/0:13,0:13:36.12:0,36,492
chr10	67439350	.	CGCGCGT	C	232.88	PASS	AB=0.929;AC=6;AF=0.107;AN=56;BaseQRankSum=6.015;DP=628;FS=5.750;HRun=0;HaplotypeScore=145.4087;InbreedingCoeff=0.1643;MQ=52.51;MQ0=7;MQRankSum=-5.239;QD=2.45;ReadPosRankSum=-3.616;VQSLOD=1.2460;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,1:23:16.11:0,16,515	0/0:8,0:8:9.01:0,9,199	1/1:18,0:4:3.01:32,3,0	0/1:23,0:5:19.66:32,0,20	0/1:10,1:11:6.13:6,0,364	0/0:14,0:14:36.12:0,36,1109	0/0:32,0:32:78.22:0,78,2254	0/1:15,5:17:99:267,0,411	0/0:17,0:17:51.16:0,51,1655	0/0:25,0:25:49.23:0,49,1796	0/0:13,0:13:30.09:0,30,861	0/0:18,0:18:44.17:0,44,1265	0/0:19,0:18:54.14:0,54,1475	0/0:25,0:24:66.21:0,66,1935	0/0:13,0:13:33.10:0,33,873	0/0:11,0:11:33.10:0,33,867	0/1:23,0:23:8.47:8,0,622	0/0:31,0:31:91.53:0,92,2772	0/0:19,0:16:48.05:0,48,1162	0/0:12,0:12:26.69:0,27,753	0/0:95,0:89:99:0,238,6810	0/0:14,0:14:32.98:0,33,981	0/0:17,0:17:48.12:0,48,1376	0/0:49,0:48:99:0,138,4418	0/0:18,0:18:45.11:0,45,1342	0/0:34,0:34:95.32:0,95,2605	0/0:11,0:11:30.07:0,30,734	0/0:15,0:15:42.14:0,42,1272
chr10	67439377	.	GCA	G	68.73	PASS	AB=0.874;AC=4;AF=0.071;AN=56;BaseQRankSum=4.785;DP=609;FS=2.656;HRun=0;HaplotypeScore=94.3169;InbreedingCoeff=0.1804;MQ=51.50;MQ0=10;MQRankSum=-4.017;QD=1.35;ReadPosRankSum=-1.614;VQSLOD=1.8673;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:16,2:18:5.70:0,6,120	1/1:5,0:5:0.81:12,1,0	0/0:24,0:3:7.87:0,8,44	0/0:26,0:3:2.92:0,3,17	0/0:10,0:10:6.49:0,6,123	0/0:10,0:10:27.09:0,27,525	0/0:39,0:39:90.31:0,90,1713	0/1:17,2:19:99:102,0,450	0/0:17,0:17:51.17:0,51,968	0/0:16,0:16:44.98:0,45,806	0/0:11,1:12:21.07:0,21,415	0/0:21,0:21:32.23:0,32,930	0/0:20,0:19:57.20:0,57,1124	0/0:24,0:24:66.21:0,66,1208	0/0:13,0:13:33.11:0,33,659	0/0:8,0:8:21.07:0,21,427	0/1:22,5:25:51.72:52,0,162	0/0:29,0:28:78.27:0,78,1483	0/0:21,0:16:45.15:0,45,837	0/0:8,0:8:24.08:0,24,441	0/0:101,0:93:99:0,240,4450	0/0:15,0:15:36.12:0,36,697	0/0:10,0:10:27.08:0,27,459	0/0:56,0:55:99:0,160,3035	0/0:13,0:13:36.09:0,36,669	0/0:24,0:24:28.19:0,28,1232	0/0:9,0:9:27.09:0,27,496	0/0:12,0:12:33.11:0,33,635
chr10	67439423	.	CGT	C	46.06	PASS	AB=0.967;AC=6;AF=0.111;AN=54;BaseQRankSum=3.423;DP=497;FS=13.448;HRun=0;HaplotypeScore=73.9424;InbreedingCoeff=0.4963;MQ=52.24;MQ0=8;MQRankSum=-3.011;QD=0.96;ReadPosRankSum=0.218;VQSLOD=0.1601;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:9,0:9:0:0,0,0	1/1:1,4:5:2.94:36,3,0	0/0:22,0:5:5.38:0,5,42	0/0:24,1:5:5.60:0,6,40	./.	0/0:7,0:7:9:0,9,94	0/0:45,0:44:59.80:0,60,876	0/0:10,0:9:18.45:0,18,200	0/0:14,0:14:36.09:0,36,538	0/0:14,0:14:35.95:0,36,529	0/0:3,0:2:3:0,3,25	0/0:13,0:13:21.05:0,21,316	0/0:17,0:17:21.28:0,21,655	0/0:21,0:21:45.13:0,45,724	0/0:8,0:8:18.03:0,18,269	0/0:6,0:6:12.02:0,12,166	1/1:5,15:17:9.91:105,10,0	0/0:30,0:29:13.03:0,13,733	0/1:13,1:7:12.82:13,0,155	0/0:7,0:7:9.03:0,9,146	0/0:89,0:82:99:0,114,1741	0/0:12,0:12:21.07:0,21,328	0/0:5,0:5:12.04:0,12,173	0/0:61,0:60:99:0,153,2442	0/0:7,0:7:14.92:0,15,143	0/0:18,0:18:47.97:0,48,584	0/0:5,0:5:14.97:0,15,220	0/0:7,0:7:21.06:0,21,289
chr10	67439475	.	CGCGCGCGTGT	C	1994.69	PASS	AB=1.000;AC=23;AF=0.676;AN=34;BaseQRankSum=6.736;DP=341;FS=1.991;HRun=0;HaplotypeScore=87.2241;InbreedingCoeff=0.4875;MQ=43.81;MQ0=6;MQRankSum=-5.810;QD=12.24;ReadPosRankSum=0.692;VQSLOD=1.6263;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:4,0:4:0:0,0,0	1/1:6,0:6:3.54:22,4,0	./.	./.	./.	./.	1/1:12,29:40:1.79:92,2,0	0/1:4,0:2:0:0,0,0	1/1:2,6:8:6.02:188,6,0	1/1:2,10:11:15.05:371,15,0	./.	1/1:5,6:11:3.01:93,3,0	0/0:7,0:7:11.63:0,12,560	1/1:4,7:11:6.02:182,6,0	./.	./.	0/1:11,0:11:19.82:54,0,20	1/1:7,26:33:9.03:283,9,0	1/1:3,3:6:9.03:275,9,0	./.	./.	0/0:5,0:5:12.04:0,12,459	0/0:3,0:3:2.93:0,3,25	0/0:55,0:54:99:0,129,5124	./.	1/1:7,6:11:15.04:389,15,0	1/1:0,3:3:6.02:170,6,0	./.
chr10	67439615	.	AGT	A	407.28	PASS	AB=0.923;AC=14;AF=0.259;AN=54;BaseQRankSum=5.175;DP=607;FS=16.921;HRun=0;HaplotypeScore=92.7312;InbreedingCoeff=-0.1577;MQ=47.45;MQ0=28;MQRankSum=2.435;QD=1.37;ReadPosRankSum=0.875;VQSLOD=0.4698;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:19:10.98:0,11,48	0/0:5,0:5:3.95:0,4,46	0/0:51,0:4:2.88:0,3,15	0/0:51,0:5:0.47:0,0,1	1/1:4,8:12:15.05:180,15,0	0/1:13,1:14:5.88:6,0,394	0/0:39,2:42:4.51:0,5,975	0/1:5,0:11:3.16:3,0,51	0/0:14,0:14:27.09:0,27,432	0/1:13,2:15:38.92:39,0,338	./.	0/1:20,3:23:50.75:51,0,679	0/1:14,1:15:5.87:6,0,397	0/1:16,5:22:99:108,0,346	0/0:8,0:8:15.05:0,15,240	0/1:7,0:7:13.70:14,0,87	0/0:9,0:15:14.84:0,15,115	0/0:39,2:41:13.17:0,13,1306	0/1:14,0:11:9.14:9,0,297	0/0:5,0:5:12.04:0,12,192	0/1:87,4:89:64:64,0,2357	0/0:8,0:8:18.05:0,18,265	0/0:5,0:5:15.05:0,15,235	0/1:44,5:48:22.47:22,0,1217	0/0:13,2:15:25.33:0,25,377	0/0:24,1:25:12.19:0,12,676	0/1:6,1:8:17.93:18,0,200	0/1:15,2:17:34.07:34,0,416
chr10	67444278	.	AGAG	A	3580.05	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=10.940;DP=578;FS=4.336;HRun=0;HaplotypeScore=82.0854;InbreedingCoeff=0.9965;MQ=69.41;MQ0=0;MQRankSum=-3.689;QD=39.78;ReadPosRankSum=3.173;VQSLOD=4.6703;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,43:45:99:1893,111,0	1/1:0,10:10:21.07:358,21,0	0/0:14,0:14:39.13:0,39,888	0/0:19,0:19:45.15:0,45,1002	0/0:19,0:19:57.20:0,57,1313	0/0:22,0:22:66.23:0,66,1501	0/0:21,0:21:60.21:0,60,1377	0/0:20,0:20:51.16:0,51,1133	0/0:22,0:22:63.22:0,63,1419	0/0:24,0:24:72.25:0,72,1641	0/0:15,0:15:45.15:0,45,1025	0/0:19,0:19:57.20:0,57,1302	0/0:22,0:22:63.22:0,63,1445	0/0:11,0:11:30.10:0,30,692	0/0:24,0:24:72.23:0,72,1577	0/0:23,0:23:69.24:0,69,1591	1/1:1,34:35:77.95:1330,78,0	0/0:16,0:16:48.16:0,48,1107	0/0:23,0:23:66.23:0,66,1518	0/0:23,0:23:66.21:0,66,1475	0/0:35,0:35:99:0,102,2345	0/0:8,0:8:21.07:0,21,475	0/0:10,0:10:27.09:0,27,622	0/0:25,0:25:69.24:0,69,1567	0/0:15,0:15:45.15:0,45,1025	0/0:20,0:20:60.21:0,60,1380	0/0:25,0:25:69.24:0,69,1561	0/0:13,0:13:39.13:0,39,899
chr10	67446603	.	G	GT	5730.94	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-13.956;DP=694;FS=1.181;HRun=2;HaplotypeScore=66.1979;InbreedingCoeff=0.9993;MQ=92.77;MQ0=0;MQRankSum=-2.688;QD=42.45;ReadPosRankSum=-0.316;VQSLOD=4.6217;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,45:47:99:2014,126,0	1/1:0,9:9:27.09:432,27,0	0/0:39,0:39:99:0,117,1543	0/0:20,0:20:51.17:0,51,713	1/1:0,20:20:54.18:863,54,0	0/0:21,0:21:60.20:0,60,839	0/0:25,0:25:72.14:0,72,989	1/1:1,27:28:81.26:1271,81,0	0/0:18,0:18:54.18:0,54,754	0/0:25,0:25:75.24:0,75,1031	0/0:17,0:17:48.16:0,48,665	0/0:27,0:27:78.26:0,78,1090	0/0:30,0:30:90.30:0,90,1255	0/0:30,0:30:90.30:0,90,1255	0/0:21,0:21:63.21:0,63,880	0/0:20,0:20:60.20:0,60,839	1/1:1,30:31:72.25:1151,72,0	0/0:22,0:22:60.20:0,60,839	0/0:17,0:17:51.17:0,51,709	0/0:19,0:19:54.18:0,54,755	0/0:65,0:65:99:0,190,2642	0/0:15,0:15:45.15:0,45,628	0/0:18,0:18:54.18:0,54,748	0/0:35,0:35:99:0,102,1390	0/0:24,0:24:69.23:0,69,960	0/0:24,0:24:69.23:0,69,965	0/0:19,0:19:57.19:0,57,797	0/0:8,0:8:24.06:0,24,317
chr10	67446967	.	TG	T	14933.72	PASS	AB=0.800;AC=55;AF=0.982;AN=56;BaseQRankSum=0.278;DP=538;FS=0.000;HRun=4;HaplotypeScore=220.3349;InbreedingCoeff=-0.0237;MQ=66.37;MQ0=0;MQRankSum=-2.317;QD=27.76;ReadPosRankSum=1.524;VQSLOD=3.1153;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,30:31:68.95:777,69,0	1/1:0,3:2:5.23:43,5,0	1/1:11,0:12:8.51:188,9,0	0/1:9,3:12:9.50:267,0,9	1/1:4,11:15:20.85:212,21,0	1/1:4,17:21:57.11:653,57,0	1/1:1,34:35:93.01:1001,93,0	1/1:2,25:27:69.12:772,69,0	1/1:1,21:22:57.17:678,57,0	1/1:2,14:16:45.13:528,45,0	1/1:3,10:13:29.93:322,30,0	1/1:3,24:27:72.22:856,72,0	1/1:3,20:24:66.13:755,66,0	1/1:0,19:19:57.17:676,57,0	1/1:2,30:32:87.26:1033,87,0	1/1:0,14:14:42.10:483,42,0	1/1:4,9:13:27.07:313,27,0	1/1:2,14:16:39.07:447,39,0	1/1:2,20:22:57.04:624,57,0	1/1:1,13:14:35.57:338,36,0	1/1:3,33:36:66.05:738,66,0	1/1:0,11:11:29.98:324,30,0	1/1:1,13:14:33.03:376,33,0	1/1:1,16:17:24.54:286,25,0	1/1:1,14:15:39.12:466,39,0	1/1:1,19:20:57.07:625,57,0	1/1:2,29:31:84.19:973,84,0	1/1:0,6:6:15.05:180,15,0
chr10	67446973	.	AG	A	104.45	PASS	AB=0.923;AC=5;AF=0.089;AN=56;BaseQRankSum=-0.989;DP=537;FS=5.712;HRun=3;HaplotypeScore=294.6696;InbreedingCoeff=0.3096;MQ=59.85;MQ0=0;MQRankSum=-0.135;QD=1.93;ReadPosRankSum=0.978;VQSLOD=-0.6953;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:45.57:0,46,208	0/0:3,0:2:5.91:0,6,48	1/1:4,4:8:16.23:107,16,0	0/1:7,3:10:30.11:99,0,30	0/1:14,0:14:1.01:1,0,35	0/0:19,0:19:8.16:0,8,57	0/0:38,0:38:43.81:0,44,328	0/0:28,0:28:51.81:0,52,246	0/0:24,0:24:30.27:0,30,168	0/0:16,0:16:20.32:0,20,166	0/0:10,0:10:0.07:0,0,39	0/0:27,0:27:27.40:0,27,161	0/0:21,0:22:26.74:0,27,114	0/1:22,0:22:0.87:1,0,100	0/0:33,0:33:29.05:0,29,137	0/0:16,0:16:30.12:0,30,171	0/0:14,0:14:23.53:0,24,122	0/0:14,0:14:31.09:0,31,144	0/0:24,0:23:50.83:0,51,335	0/0:13,0:13:21.50:0,22,122	0/0:39,0:38:43.95:0,44,208	0/0:11,0:11:15.26:0,15,88	0/0:14,0:14:11.88:0,12,72	0/0:18,0:18:15.75:0,16,92	0/0:15,0:15:9.94:0,10,44	0/0:18,0:18:34.77:0,35,184	0/0:30,0:30:47.89:0,48,207	0/0:6,0:6:10.99:0,11,39
chr10	67446985	.	TA	T	5405.26	PASS	AB=0.985;AC=45;AF=0.804;AN=56;BaseQRankSum=9.992;DP=473;FS=11.724;HRun=1;HaplotypeScore=266.6994;InbreedingCoeff=-0.0532;MQ=49.64;MQ0=0;MQRankSum=-5.028;QD=11.55;ReadPosRankSum=10.220;VQSLOD=1.4133;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:28,2:30:3.17:314,0,3	1/1:2,0:1:2.88:15,3,0	0/0:5,0:5:3.04:0,3,43	0/1:7,0:6:3.53:4,0,21	1/1:9,2:11:11.86:94,12,0	0/1:18,0:18:50.66:161,0,51	0/1:32,1:33:2.46:380,0,2	0/1:22,0:22:5.97:218,0,6	1/1:22,0:22:45.45:349,45,0	1/1:14,0:14:12.62:177,13,0	1/1:11,0:10:0.72:112,1,0	1/1:26,1:27:19.38:376,19,0	1/1:17,1:18:30.94:284,31,0	1/1:20,2:22:43.83:374,44,0	1/1:33,0:33:23.41:450,23,0	1/1:14,0:14:40.81:243,41,0	0/1:11,0:11:24.32:66,0,24	1/1:13,0:13:9.11:125,9,0	0/1:20,1:21:18.98:202,0,19	1/1:11,0:11:5.64:152,6,0	0/1:34,0:33:26.85:160,0,27	1/1:10,0:10:2.69:92,3,0	1/1:9,1:10:20.75:149,21,0	1/1:15,0:15:7.15:115,7,0	1/1:11,0:11:29.45:182,29,0	1/1:13,0:13:19.22:196,19,0	1/1:30,0:30:17.73:364,18,0	0/1:5,0:5:9.34:50,0,9
chr10	67447008	.	A	AC	7148.39	PASS	AB=0.786;AC=54;AF=0.964;AN=56;BaseQRankSum=-0.743;DP=486;FS=0.000;HRun=2;HaplotypeScore=256.4949;InbreedingCoeff=-0.0505;MQ=57.83;MQ0=0;MQRankSum=-1.887;QD=14.71;ReadPosRankSum=1.766;VQSLOD=4.4167;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,22:30:57.56:332,58,0	1/1:2,1:2:6:62,6,0	0/1:9,3:12:99:100,0,140	0/1:12,5:16:57.32:244,0,57	1/1:2,9:11:14.94:152,15,0	1/1:4,11:15:28.50:189,28,0	1/1:6,24:30:67.83:435,68,0	1/1:6,19:24:56.34:425,56,0	1/1:5,14:19:40.44:310,40,0	1/1:3,10:13:31.33:253,31,0	1/1:3,8:10:11.88:92,12,0	1/1:1,19:20:54.18:310,54,0	1/1:1,17:18:43.40:270,43,0	1/1:7,16:23:58.27:399,58,0	1/1:3,25:28:77.21:453,77,0	1/1:1,13:14:36.67:246,37,0	1/1:0,15:15:28.93:185,29,0	1/1:5,16:21:56.12:465,56,0	1/1:7,16:23:65.28:604,65,0	1/1:3,8:11:20.72:155,21,0	1/1:12,23:34:46.69:350,47,0	1/1:3,8:11:12.93:74,13,0	1/1:6,3:9:4.41:45,4,0	1/1:4,13:17:31.50:189,31,0	1/1:5,10:15:20.60:145,21,0	1/1:3,10:13:27.39:263,27,0	1/1:6,17:23:47.58:314,48,0	1/1:0,4:4:11.91:87,12,0
chr10	67447411	.	TA	T	1808.84	PASS	AB=0.874;AC=13;AF=0.232;AN=56;BaseQRankSum=12.634;DP=476;FS=6.107;HRun=12;HaplotypeScore=59.9960;InbreedingCoeff=0.6306;MQ=55.25;MQ0=11;MQRankSum=-1.937;QD=9.72;ReadPosRankSum=1.767;VQSLOD=2.7432;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,26:32:74.60:568,75,0	1/1:1,7:9:19.96:145,20,0	0/0:10,0:6:8.84:0,9,114	0/0:3,0:2:5.62:0,6,30	1/1:4,12:17:33.98:259,34,0	0/0:23,1:24:33.88:0,34,523	0/0:7,0:7:21.04:0,21,213	1/1:11,0:28:44.80:131,45,0	0/0:10,0:10:21.04:0,21,213	0/1:13,2:14:16.40:16,0,214	0/0:14,0:13:36.06:0,36,360	0/0:12,0:12:33.02:0,33,319	0/1:12,2:14:4.64:5,0,283	0/0:11,1:12:9.82:0,10,274	0/0:16,0:15:9.97:0,10,280	0/0:10,0:9:26.89:0,27,258	1/1:8,39:42:99:835,108,0	0/0:27,0:25:60.12:0,60,609	0/0:26,1:24:27.83:0,28,449	0/0:18,0:17:35.84:0,36,333	0/0:4,0:4:6.01:0,6,61	0/0:3,0:3:2.84:0,3,30	0/0:14,0:14:33.06:0,33,333	0/0:6,0:5:15.03:0,15,152	0/0:24,0:23:56.26:0,56,596	0/0:23,2:25:22.76:0,23,425	0/1:16,3:19:27.62:28,0,293	0/0:21,1:22:30.87:0,31,488
chr10	67450613	.	T	TTG	1606.08	PASS	AB=1.000;AC=45;AF=0.804;AN=56;BaseQRankSum=-3.300;DP=197;FS=6.369;HRun=0;HaplotypeScore=65.1777;InbreedingCoeff=0.4218;MQ=50.49;MQ0=6;MQRankSum=-1.544;QD=9.68;ReadPosRankSum=3.782;VQSLOD=2.4233;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:7:0.68:0,1,12	0/0:5,0:5:1.28:0,1,14	1/1:5,0:3:11.86:48,12,0	0/1:3,0:3:0.74:7,0,1	0/0:10,0:10:1.47:0,1,26	1/1:3,3:6:8.81:53,9,0	1/1:0,2:1:2.96:19,3,0	0/1:15,0:14:3.73:4,0,10	1/1:2,7:8:17.44:105,17,0	1/1:2,8:10:25.48:193,25,0	1/1:1,4:5:11.75:72,12,0	1/1:2,6:8:17.72:113,18,0	0/0:8,1:8:2.88:0,3,15	1/1:2,3:5:8.32:51,8,0	1/1:2,5:7:14.17:82,14,0	1/1:0,5:5:12.31:78,12,0	0/1:9,0:9:0.16:1,0,0	1/1:2,4:6:11.85:79,12,0	1/1:2,4:6:5.47:66,5,0	1/1:1,10:11:22.16:143,22,0	1/1:1,3:4:8.87:58,9,0	1/1:0,5:6:17.43:100,17,0	1/1:0,7:6:17.68:113,18,0	1/1:3,8:11:17.02:106,17,0	1/1:2,3:5:7.38:55,7,0	1/1:2,7:8:20.89:155,21,0	1/1:10,0:10:2.33:9,2,0	1/1:0,1:1:2.98:21,3,0
chr10	67451822	.	C	CTAT	1427.81	PASS	AB=0.957;AC=11;AF=0.196;AN=56;BaseQRankSum=-1.546;DP=469;FS=0.566;HRun=0;HaplotypeScore=102.6113;InbreedingCoeff=0.8079;MQ=65.95;MQ0=16;MQRankSum=-1.053;QD=10.35;ReadPosRankSum=-2.560;VQSLOD=2.8545;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,3:28:20.73:277,21,0	1/1:3,0:7:5.87:64,6,0	0/0:33,0:11:3.18:0,3,231	0/0:22,0:12:26.64:0,27,228	1/1:6,1:22:54.11:501,54,0	0/0:14,0:14:22.38:0,22,189	0/1:17,0:22:12.31:12,0,215	1/1:29,0:30:60.97:464,61,0	0/0:12,0:14:33.89:0,34,361	0/0:12,0:14:18.73:0,19,226	0/0:7,0:7:15.02:0,15,158	0/0:19,0:19:41.90:0,42,490	0/0:16,0:16:18.33:0,18,326	0/0:13,0:14:23.05:0,23,398	0/0:10,0:11:27:0,27,312	0/0:12,0:11:17.69:0,18,241	1/1:12,12:27:24.62:282,25,0	0/0:18,0:19:32.56:0,33,334	0/0:11,0:11:16.96:0,17,218	0/0:12,0:15:29.79:0,30,299	0/0:7,0:8:15.43:0,15,167	0/0:12,0:11:23.70:0,24,232	0/0:16,0:15:29.17:0,29,323	0/0:15,0:14:14.50:0,14,148	0/0:11,0:12:24.41:0,24,288	0/0:11,0:14:26.08:0,26,240	0/0:14,0:17:28.10:0,28,429	0/0:4,0:7:11.95:0,12,158
chr10	67451823	.	T	TA	926.39	PASS	AB=1.000;AC=8;AF=0.143;AN=56;BaseQRankSum=-1.454;DP=483;FS=11.278;HRun=0;HaplotypeScore=93.1793;InbreedingCoeff=0.6117;MQ=62.46;MQ0=17;MQRankSum=0.516;QD=8.50;ReadPosRankSum=0.082;VQSLOD=3.1774;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:26:6.63:96,0,7	1/1:3,0:3:3:25,3,0	0/0:32,0:10:2.18:0,2,198	0/0:21,0:11:25.94:0,26,204	1/1:19,1:20:22.61:244,23,0	0/0:15,0:15:26.15:0,26,204	0/0:22,0:22:5.14:0,5,199	1/1:6,25:30:76.31:615,76,0	0/0:16,0:16:32.12:0,32,311	0/0:12,0:12:19.03:0,19,176	0/0:9,0:8:15.02:0,15,147	0/0:21,0:21:42.47:0,42,414	0/0:16,0:16:32.75:0,33,289	0/0:14,0:14:20.10:0,20,308	0/0:16,0:14:29.93:0,30,281	0/0:14,0:13:20.97:0,21,225	0/1:28,0:27:9.38:89,0,9	0/0:22,0:21:35.76:0,36,283	0/0:13,0:12:26.35:0,26,226	0/0:17,0:16:29.99:0,30,275	0/0:9,0:8:15.45:0,15,132	0/0:13,0:11:26.86:0,27,227	0/0:15,0:14:32.79:0,33,292	0/0:23,0:21:14.95:0,15,137	0/0:14,0:13:24.47:0,24,239	0/0:15,0:15:26.68:0,27,232	0/0:18,0:18:43.81:0,44,394	0/0:7,0:7:11.94:0,12,120
chr10	67454257	.	A	AGGGAG	921.59	PASS	AB=0.917;AC=3;AF=0.054;AN=56;BaseQRankSum=1.876;DP=640;FS=0.000;HRun=0;HaplotypeScore=126.3548;InbreedingCoeff=0.6434;MQ=74.65;MQ0=0;MQRankSum=-3.404;QD=16.46;ReadPosRankSum=-2.568;VQSLOD=2.3491;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:60.20:0,60,1131	0/0:15,0:15:39.13:0,39,749	0/1:29,1:30:67.35:67,0,618	0/0:31,0:26:21.23:0,21,310	1/1:10,13:23:32.89:960,33,0	0/0:25,0:25:63.21:0,63,1210	0/0:23,0:23:60.21:0,60,1133	0/0:22,0:22:25.32:0,25,488	0/0:24,0:24:63.22:0,63,1201	0/0:18,0:18:42.14:0,42,797	0/0:14,0:14:42.14:0,42,785	0/0:32,0:32:84.27:0,84,1547	0/0:19,0:19:48.16:0,48,922	0/0:10,0:10:24.08:0,24,460	0/0:24,0:24:63.22:0,63,1179	0/0:29,0:29:78.24:0,78,1430	0/0:32,0:32:69.24:0,69,1303	0/0:20,0:19:48.15:0,48,878	0/0:26,0:26:48.16:0,48,867	0/0:19,0:19:33.11:0,33,634	0/0:25,0:25:57.18:0,57,1026	0/0:20,0:20:39.13:0,39,731	0/0:15,0:15:36.12:0,36,679	0/0:32,0:32:75.24:0,75,1374	0/0:18,0:18:48.16:0,48,913	0/0:25,0:25:63.21:0,63,1167	0/0:21,0:20:54.18:0,54,1037	0/0:10,0:10:27.09:0,27,519
chr10	67454559	.	ATATC	A	256.93	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.985;DP=574;FS=3.832;HRun=0;HaplotypeScore=95.5564;InbreedingCoeff=0.9692;MQ=63.37;MQ0=2;MQRankSum=0.423;QD=15.11;ReadPosRankSum=0.164;VQSLOD=2.7198;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:77.81:0,78,1195	0/0:9,0:8:23.98:0,24,427	0/0:22,0:18:47.40:0,47,469	0/0:12,0:9:27.05:0,27,300	1/1:0,17:17:23.96:350,24,0	0/0:25,0:25:25.26:0,25,1419	0/0:29,0:29:61.11:0,61,1538	0/0:41,0:41:99:0,120,1354	0/0:18,0:18:54.07:0,54,1034	0/0:25,0:25:75.23:0,75,1855	0/0:12,0:12:36.10:0,36,813	0/0:21,0:21:60.09:0,60,1320	0/0:13,0:13:39.06:0,39,759	0/0:13,0:13:39.07:0,39,728	0/0:20,0:20:34.11:0,34,934	0/0:22,0:22:63.12:0,63,1299	0/0:31,0:31:78.09:0,78,1221	0/0:18,0:18:52.21:0,52,1025	0/0:21,0:20:60.03:0,60,881	0/0:13,0:13:13.16:0,13,740	0/0:16,0:16:48.03:0,48,931	0/0:17,0:17:50.80:0,51,833	0/0:20,0:20:57.11:0,57,1194	0/0:19,0:19:33.23:0,33,1181	0/0:18,0:18:53.84:0,54,662	0/0:29,0:29:87.06:0,87,1609	0/0:29,0:29:81.07:0,81,1705	0/0:11,0:11:33.02:0,33,490
chr10	67454561	.	A	ATCTT	2811.09	PASS	AB=1.000;AC=10;AF=0.185;AN=54;BaseQRankSum=-5.226;DP=579;FS=0.000;HRun=0;HaplotypeScore=93.1157;InbreedingCoeff=0.7044;MQ=62.08;MQ0=2;MQRankSum=-0.262;QD=17.57;ReadPosRankSum=-3.785;VQSLOD=2.3100;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:15,19:36:42.06:945,42,0	1/1:2,7:8:18.06:428,18,0	1/1:21,0:17:2.60:10,3,0	./.	0/1:17,0:17:4.32:4,0,45	0/0:23,0:25:54.16:0,54,790	0/0:28,0:29:17.71:0,18,677	0/1:45,0:45:28.55:661,0,29	0/0:18,0:18:30.10:0,30,473	0/0:24,0:24:60.20:0,60,922	0/0:11,0:11:24.08:0,24,378	0/0:21,0:21:45.15:0,45,686	0/0:13,0:13:21.07:0,21,330	0/0:13,0:13:21.05:0,21,280	0/0:18,0:19:30.09:0,30,444	0/0:22,0:22:39.13:0,39,605	1/1:13,18:32:39.13:917,39,0	0/0:17,0:18:30.10:0,30,473	0/0:21,0:20:18.05:0,18,263	0/0:14,0:14:27.06:0,27,380	0/0:16,0:16:27.06:0,27,376	0/0:16,0:16:21.07:0,21,330	0/0:19,0:19:36.12:0,36,566	0/0:22,0:22:43.34:0,43,630	0/0:18,0:18:12.04:0,12,189	0/0:28,0:28:42.12:0,42,638	0/0:29,0:29:54.16:0,54,790	0/0:11,0:11:9.03:0,9,131
chr10	67454718	.	CCT	C	1117.99	PASS	AB=0.817;AC=10;AF=0.192;AN=52;BaseQRankSum=8.332;DP=576;FS=0.000;HRun=0;HaplotypeScore=45.6766;InbreedingCoeff=0.6547;MQ=35.87;MQ0=223;MQRankSum=-4.513;QD=8.41;ReadPosRankSum=-0.102;VQSLOD=2.9564;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,8:9:15.05:210,15,0	1/1:10,6:7:12.04:168,12,0	0/0:44,1:3:9:0,9,97	0/1:48,0:7:1.85:2,0,236	1/1:4,7:8:6.02:84,6,0	0/0:11,0:8:9.03:0,9,162	0/0:24,0:15:39.13:0,39,702	0/1:11,15:22:40.43:537,0,40	0/0:25,0:8:15.05:0,15,270	0/0:19,0:7:20.81:0,21,322	./.	0/0:25,0:15:33.08:0,33,535	0/0:17,0:11:21.07:0,21,378	0/0:14,0:6:15.05:0,15,269	0/0:19,0:10:24.08:0,24,432	0/0:20,0:11:22.32:0,22,429	1/1:15,6:7:20.96:268,21,0	0/0:22,0:11:26.83:0,27,444	0/0:26,0:10:27.09:0,27,486	0/0:11,0:5:6.01:0,6,80	0/0:44,0:36:77.71:0,78,1392	0/0:14,0:6:12.04:0,12,200	./.	0/0:40,0:26:51.13:0,51,883	0/0:12,0:7:15.01:0,15,208	0/0:21,0:13:36.08:0,36,614	0/0:19,0:10:27.09:0,27,486	0/0:5,0:1:3.01:0,3,54
chr10	67454732	.	TGC	T	247.67	PASS	AB=0.891;AC=3;AF=0.060;AN=50;BaseQRankSum=4.462;DP=547;FS=11.013;HRun=0;HaplotypeScore=39.2558;InbreedingCoeff=-0.1119;MQ=30.49;MQ0=276;MQRankSum=-4.158;QD=2.81;ReadPosRankSum=-0.707;VQSLOD=-0.4608;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:7:12.04:0,12,216	0/0:17,0:5:12.04:0,12,220	./.	0/1:40,1:4:27.62:28,0,39	0/0:8,0:5:3.01:0,3,60	0/0:6,0:3:9.03:0,9,183	0/0:19,0:9:24.08:0,24,478	0/1:15,7:16:99:290,0,341	0/0:26,0:6:15.05:0,15,278	0/0:20,0:4:12.04:0,12,218	./.	0/0:24,0:13:30.55:0,31,570	0/0:11,0:5:12.04:0,12,235	0/0:13,0:5:12.04:0,12,243	0/0:20,0:8:21.07:0,21,417	0/0:20,0:8:18.06:0,18,365	0/1:23,1:7:26.77:27,0,237	0/0:24,0:9:19.31:0,19,329	0/0:26,0:7:21.07:0,21,399	0/0:13,0:5:2.80:0,3,60	0/0:46,0:29:68.82:0,69,1244	0/0:14,0:1:3.01:0,3,49	./.	0/0:36,0:21:45.11:0,45,820	0/0:13,0:3:6.02:0,6,122	0/0:16,0:9:24.08:0,24,478	0/0:19,0:8:21.06:0,21,389	0/0:5,0:1:3.01:0,3,61
chr10	67454810	.	TCTGC	T	80.55	PASS	AB=0.858;AC=6;AF=0.115;AN=52;BaseQRankSum=3.627;DP=373;FS=7.468;HRun=0;HaplotypeScore=39.8459;InbreedingCoeff=-0.0269;MQ=28.03;MQ0=172;MQRankSum=-2.873;QD=1.17;ReadPosRankSum=-0.216;VQSLOD=0.0825;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:16,4:6:13.68:52,0,14	0/1:3,3:3:26.68:27,0,89	./.	./.	0/0:11,6:6:0:0,0,0	0/0:14,0:7:21.07:0,21,365	0/0:28,0:17:34.67:0,35,632	0/1:12,1:3:26.08:26,0,97	0/0:10,0:4:6.02:0,6,113	0/0:12,0:2:6.02:0,6,113	0/0:3,0:3:5.61:0,6,70	0/0:15,0:8:18.06:0,18,338	0/0:9,0:4:9.03:0,9,165	0/0:10,0:8:15.05:0,15,284	0/0:21,0:11:20.91:0,21,400	0/0:14,0:8:18.06:0,18,331	0/1:9,3:6:48.04:48,0,96	0/0:21,0:11:25.33:0,25,463	0/0:12,0:1:3.01:0,3,53	0/1:7,0:2:0:0,0,0	0/0:34,0:16:27.09:0,27,501	0/0:9,0:3:7.58:0,8,104	0/0:4,0:2:2.94:0,3,18	0/0:30,0:18:36.59:0,37,694	0/0:10,0:4:7.24:0,7,76	0/1:10,1:6:39.08:39,0,259	0/0:16,0:8:17.85:0,18,282	0/0:2,0:2:3.01:0,3,49
chr10	67454870	.	TGCCC	T	129.54	PASS	AB=0.794;AC=5;AF=0.093;AN=54;BaseQRankSum=4.107;DP=217;FS=0.000;HRun=0;HaplotypeScore=40.4473;InbreedingCoeff=0.1076;MQ=49.63;MQ0=10;MQRankSum=-3.125;QD=4.47;ReadPosRankSum=-0.794;VQSLOD=1.2618;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:6,4:9:37.86:63,0,38	1/1:2,0:1:3.01:42,3,0	0/1:10,0:3:3.99:4,0,65	0/0:16,0:6:3.88:0,4,118	0/0:7,0:6:2.91:0,3,44	0/0:8,0:6:12.04:0,12,262	0/0:13,0:13:36.11:0,36,775	0/0:3,0:2:6.02:0,6,88	0/0:6,0:6:12.04:0,12,262	0/0:3,0:3:9.03:0,9,193	./.	0/0:8,0:8:24.01:0,24,412	0/0:10,0:9:27.05:0,27,634	0/0:7,0:7:18.06:0,18,342	0/0:7,0:7:21.05:0,21,419	0/0:8,0:8:24.08:0,24,546	0/1:3,3:6:35.25:125,0,35	0/0:13,0:12:33.09:0,33,660	0/0:10,0:5:15.05:0,15,264	0/0:3,0:3:7.84:0,8,93	0/0:18,0:13:36.10:0,36,765	0/0:4,0:4:12.04:0,12,225	0/0:4,0:4:12.03:0,12,274	0/0:17,0:16:45.15:0,45,891	0/0:2,0:2:6.02:0,6,174	0/0:10,0:10:30.07:0,30,641	0/0:8,0:8:24.08:0,24,592	0/0:1,0:1:3.01:0,3,69
chr10	67454958	.	A	AT	1532.43	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=8.881;DP=376;FS=9.900;HRun=10;HaplotypeScore=44.8939;InbreedingCoeff=0.8444;MQ=64.43;MQ0=2;MQRankSum=-0.578;QD=20.43;ReadPosRankSum=2.190;VQSLOD=4.1669;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,28:30:78.20:832,78,0	1/1:0,7:7:15.04:160,15,0	0/0:12,0:9:5.38:0,5,79	0/0:9,0:6:14.37:0,14,94	1/1:3,1:19:45.77:250,46,0	0/0:12,0:12:29.95:0,30,246	0/0:20,0:20:47.90:0,48,390	0/0:11,0:11:17.95:0,18,148	0/0:13,0:13:38.93:0,39,315	0/0:8,0:8:20.95:0,21,169	0/0:11,0:11:29.96:0,30,246	0/0:14,0:14:35.96:0,36,296	0/0:7,1:8:5.46:0,5,132	0/0:18,0:18:44.94:0,45,369	0/0:11,0:11:32.96:0,33,271	0/0:8,0:8:3.17:0,3,130	1/1:2,15:17:42.11:448,42,0	0/0:15,0:15:27.40:0,27,269	0/0:20,0:20:53.90:0,54,440	0/0:10,0:10:26.96:0,27,221	0/0:8,0:8:17.97:0,18,148	0/0:12,0:12:35.96:0,36,296	0/0:8,0:8:23.97:0,24,197	0/0:30,0:30:83.82:0,84,679	0/0:10,0:10:29.97:0,30,246	0/0:12,1:12:4.01:0,4,238	0/0:14,0:14:32.92:0,33,267	0/0:6,0:6:17.98:0,18,148
chr10	67455804	.	GCC	G	5991.37	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=13.300;DP=707;FS=11.086;HRun=3;HaplotypeScore=83.5837;InbreedingCoeff=0.9999;MQ=88.73;MQ0=0;MQRankSum=-2.714;QD=41.61;ReadPosRankSum=1.962;VQSLOD=3.5955;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,38:38:99:1700,111,0	1/1:0,18:18:51.13:755,51,0	0/0:25,0:25:72.25:0,72,1380	0/0:30,0:30:74.93:0,75,1383	1/1:3,19:22:54.18:827,54,0	0/0:13,0:13:39.13:0,39,754	0/0:31,0:30:89.89:0,90,1731	1/1:2,24:26:69.23:1056,69,0	0/0:26,0:26:78.27:0,78,1491	0/0:15,0:15:45.15:0,45,839	0/0:17,0:17:51.17:0,51,983	0/0:28,0:28:84.28:0,84,1586	0/0:21,0:21:63.22:0,63,1214	0/0:25,0:25:75.26:0,75,1442	0/0:37,0:37:99:0,111,2125	0/0:20,0:20:60.21:0,60,1160	1/1:0,40:40:99:1654,108,0	0/0:28,0:28:78.27:0,78,1502	0/0:22,0:22:66.23:0,66,1272	0/0:22,0:22:66.23:0,66,1263	0/0:40,0:40:99:0,120,2259	0/0:24,0:24:72.25:0,72,1390	0/0:20,0:20:57.20:0,57,1083	0/0:35,0:35:99:0,102,1927	0/0:16,0:16:48.16:0,48,927	0/0:31,0:31:90.31:0,90,1730	0/0:26,0:26:78.26:0,78,1463	0/0:11,0:11:33.11:0,33,637
chr10	67456879	.	TGAAG	T	1135.81	PASS	AB=1.000;AC=6;AF=0.107;AN=56;BaseQRankSum=9.148;DP=594;FS=16.056;HRun=0;HaplotypeScore=111.6055;InbreedingCoeff=0.2529;MQ=60.68;MQ0=3;MQRankSum=-4.263;QD=9.39;ReadPosRankSum=-0.312;VQSLOD=1.7160;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:32:99:259,0,191	0/1:5,0:8:62.96:63,0,103	0/0:23,0:19:50.14:0,50,531	0/0:13,0:11:26.24:0,26,325	0/1:29,0:29:99:137,0,709	0/0:23,0:23:69.11:0,69,1395	0/0:19,0:19:57.03:0,57,961	1/1:2,28:28:83.18:588,83,0	0/0:21,0:21:38.81:0,39,1015	0/0:30,0:30:87.23:0,87,1782	0/0:14,0:14:42.02:0,42,657	0/0:22,0:22:66.12:0,66,1392	0/0:25,0:25:75.04:0,75,1401	0/0:16,0:16:48.06:0,48,867	0/0:15,0:15:45.02:0,45,666	0/0:13,0:13:39.01:0,39,671	0/1:18,0:21:99:220,0,157	0/0:26,0:26:69.82:0,70,1075	0/0:18,0:18:48.04:0,48,551	0/0:30,0:30:87.07:0,87,1600	0/0:11,0:12:35.93:0,36,541	0/0:22,0:22:65.91:0,66,1125	0/0:19,0:19:57.08:0,57,1068	0/0:23,0:23:58.74:0,59,911	0/0:17,0:17:26.74:0,27,810	0/0:23,0:23:69.19:0,69,1533	0/0:29,0:29:87.04:0,87,1570	0/0:19,0:19:39.19:0,39,1175
chr10	67457533	.	GA	G	1030.30	PASS	AB=0.771;AC=8;AF=0.143;AN=56;BaseQRankSum=8.881;DP=518;FS=0.539;HRun=10;HaplotypeScore=67.9820;InbreedingCoeff=0.6599;MQ=70.52;MQ0=4;MQRankSum=-4.243;QD=11.98;ReadPosRankSum=-0.216;VQSLOD=3.1304;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,10:14:33.85:283,34,0	0/1:1,3:4:21.15:66,0,21	0/0:28,1:18:1.61:0,2,192	0/1:31,1:25:7.64:8,0,295	1/1:2,16:18:50.98:440,51,0	0/0:27,0:27:69.19:0,69,763	0/0:15,0:15:36.10:0,36,398	0/0:19,0:29:54.96:0,55,338	0/0:20,0:20:48.13:0,48,529	0/0:20,0:20:45.11:0,45,486	0/0:11,1:13:7.55:0,8,287	0/0:17,0:17:42.11:0,42,465	0/0:17,0:17:48.11:0,48,522	0/0:25,0:25:60.15:0,60,656	0/0:19,0:19:48.12:0,48,523	0/0:13,0:13:33.09:0,33,365	1/1:5,13:18:44.96:386,45,0	0/0:15,0:15:39.10:0,39,430	0/0:21,0:20:50.94:0,51,527	0/0:12,0:12:32.91:0,33,338	0/0:11,0:11:23.90:0,24,247	0/0:13,0:13:36.10:0,36,398	0/0:19,0:19:39.10:0,39,424	0/0:30,1:31:56.42:0,56,839	0/0:12,0:12:30.08:0,30,332	0/0:17,0:17:48.05:0,48,515	0/0:26,2:27:49.10:0,49,736	0/0:6,0:6:15.04:0,15,166
chr10	67457552	.	CA	C	1991.53	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=12.285;DP=506;FS=5.820;HRun=8;HaplotypeScore=67.8128;InbreedingCoeff=0.9068;MQ=66.27;MQ0=4;MQRankSum=-6.388;QD=15.56;ReadPosRankSum=-3.054;VQSLOD=3.1268;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:3,17:20:44.68:432,45,0	1/1:1,5:6:17.82:158,18,0	0/1:30,0:15:5.18:5,0,134	0/0:29,0:20:20.07:0,20,342	1/1:5,15:20:45.05:428,45,0	0/0:26,0:26:72.19:0,72,855	0/0:12,0:12:27.08:0,27,326	1/1:4,31:33:84.06:799,84,0	0/0:14,0:14:39.12:0,39,471	0/0:18,0:18:43.01:0,43,501	0/0:12,0:12:36.11:0,36,435	0/0:15,0:15:39.12:0,39,471	0/0:18,0:18:54.16:0,54,641	0/0:24,0:24:63.19:0,63,761	0/0:14,0:14:36.11:0,36,435	0/0:10,0:10:24.06:0,24,278	1/1:3,14:17:35.67:346,36,0	0/0:18,0:18:48.10:0,48,562	0/0:19,0:17:51.16:0,51,616	0/0:13,0:13:33.08:0,33,384	0/0:11,0:11:30.09:0,30,362	0/0:14,0:14:33.10:0,33,399	0/0:14,0:14:36.11:0,36,435	0/0:29,0:29:72.89:0,73,890	0/0:11,0:11:33.08:0,33,384	0/0:23,0:23:60.18:0,60,724	0/0:26,1:26:43.25:0,43,771	0/0:7,0:7:21.06:0,21,253
chr10	67458038	.	CCCCTCT	C	833.27	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=2.440;DP=562;FS=1.918;HRun=0;HaplotypeScore=106.8589;InbreedingCoeff=0.8484;MQ=60.16;MQ0=15;MQRankSum=-2.777;QD=16.67;ReadPosRankSum=-0.147;VQSLOD=3.2563;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:19,8:24:42.04:663,42,0	1/1:8,0:7:8.98:110,9,0	0/0:23,0:5:0.89:0,1,2	0/0:17,0:7:3.62:0,4,12	0/0:13,0:14:20.97:0,21,321	0/0:11,0:10:18.06:0,18,476	0/0:14,0:13:21.06:0,21,585	0/0:29,0:26:45.49:0,45,565	0/0:16,0:15:26.97:0,27,557	0/0:25,0:25:53.89:0,54,1342	0/0:11,0:11:24.08:0,24,681	0/0:17,0:17:33.10:0,33,863	0/0:24,0:24:53.97:0,54,1435	0/0:19,0:18:45.15:0,45,1478	0/0:29,0:24:51.05:0,51,1244	0/0:12,0:12:21.01:0,21,459	1/1:6,9:15:8.98:190,9,0	0/0:11,0:10:15:0,15,289	0/0:17,0:17:33.05:0,33,600	0/0:10,0:10:21.07:0,21,644	0/0:45,0:45:99:0,105,2963	0/0:12,0:11:27.09:0,27,856	0/0:17,0:16:33.02:0,33,821	0/0:22,0:20:36.10:0,36,969	0/0:40,0:39:81.12:0,81,1975	0/0:30,0:30:65.46:0,65,1614	0/0:24,0:24:56.99:0,57,1517	0/0:23,0:23:57.14:0,57,1729
chr10	67458121	.	C	CATCT	2132.05	PASS	AB=0.898;AC=17;AF=0.327;AN=52;BaseQRankSum=-3.843;DP=570;FS=1.472;HRun=0;HaplotypeScore=111.7507;InbreedingCoeff=0.6028;MQ=66.04;MQ0=14;MQRankSum=0.040;QD=10.01;ReadPosRankSum=1.346;VQSLOD=3.1720;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:24:0:0,0,0	0/0:15,0:15:0:0,0,0	1/1:28,0:14:2.22:7,2,0	./.	0/0:9,0:15:2.67:0,3,26	0/0:16,0:16:27.09:0,27,409	0/0:16,0:16:8.98:0,9,131	./.	1/1:16,5:21:21.07:438,21,0	1/1:17,2:19:18.06:386,18,0	1/1:15,4:20:21.07:486,21,0	1/1:6,6:12:9.03:208,9,0	0/0:19,0:18:18.03:0,18,248	1/1:11,0:11:5.97:65,6,0	0/0:23,0:23:30.10:0,30,454	0/0:17,0:17:24.08:0,24,364	0/0:19,0:19:2.98:0,3,29	0/0:19,0:19:18.06:0,18,273	0/0:12,0:18:2.98:0,3,150	0/0:8,0:16:18.01:0,18,164	0/0:22,0:22:27.09:0,27,409	0/0:16,0:16:9.03:0,9,131	0/0:22,0:21:12.04:0,12,182	0/0:18,0:18:12.04:0,12,174	0/1:14,10:25:30.39:263,0,30	0/1:24,0:24:14.73:15,0,402	0/0:26,0:25:42.13:0,42,615	1/1:22,4:26:24.05:433,24,0
chr10	67458152	.	CTATCTATCTATCT	C	378.89	PASS	AB=0.525;AC=3;AF=0.054;AN=56;BaseQRankSum=2.328;DP=533;FS=0.000;HRun=0;HaplotypeScore=174.7336;InbreedingCoeff=0.3562;MQ=54.92;MQ0=10;MQRankSum=-3.171;QD=11.84;ReadPosRankSum=1.237;VQSLOD=2.3859;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:21:6.02:0,6,93	1/1:0,11:11:2.67:107,3,0	0/0:13,0:3:9.03:0,9,134	0/0:9,0:2:3.01:0,3,44	0/0:17,0:16:36.04:0,36,507	0/0:17,0:17:45.15:0,45,2215	0/0:17,0:17:48.16:0,48,1529	0/0:34,0:27:71.82:0,72,1313	0/0:16,0:16:42.09:0,42,1491	0/0:21,0:21:60.21:0,60,2143	0/0:23,0:23:65.94:0,66,2053	0/0:18,0:18:39.13:0,39,1003	0/0:15,0:15:42.14:0,42,1728	0/0:13,0:13:33.11:0,33,930	0/0:19,0:19:57.19:0,57,2646	0/0:17,0:17:39.13:0,39,2124	0/1:2,19:20:32.03:363,0,32	0/0:22,0:21:57.19:0,57,1995	0/0:20,0:20:53.78:0,54,1509	0/0:23,0:22:57.19:0,57,1288	0/0:21,0:20:60.21:0,60,2607	0/0:19,0:19:44.88:0,45,1308	0/0:18,0:18:42.08:0,42,1597	0/0:12,0:12:27.09:0,27,1165	0/0:28,0:28:60.21:0,60,2230	0/0:25,0:25:75.26:0,75,3257	0/0:26,0:23:69.22:0,69,3463	0/0:15,0:15:42.13:0,42,1393
chr10	67458156	.	CTATCTATCT	C	271.51	PASS	AB=1.000;AC=4;AF=0.071;AN=56;BaseQRankSum=4.800;DP=527;FS=2.898;HRun=0;HaplotypeScore=140.3214;InbreedingCoeff=0.2250;MQ=55.18;MQ0=11;MQRankSum=-3.991;QD=5.54;ReadPosRankSum=1.922;VQSLOD=2.6790;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:5,16:19:3.01:0,3,42	1/1:11,0:11:2.68:59,3,0	0/0:10,0:2:6.02:0,6,88	0/0:9,0:2:3.01:0,3,44	0/1:17,0:16:95.05:95,0,267	0/0:16,0:16:42.14:0,42,1658	0/0:19,0:19:54.17:0,54,1242	0/0:31,0:24:63.17:0,63,966	0/0:18,0:18:39.06:0,39,1191	0/0:22,0:22:66.23:0,66,1779	0/0:21,0:21:59.98:0,60,1609	0/0:18,0:18:36.12:0,36,817	0/0:15,0:15:42.14:0,42,1399	0/0:13,0:13:33.10:0,33,707	0/0:21,0:21:54.18:0,54,1972	0/0:17,0:17:39.13:0,39,1549	0/1:21,0:20:32.03:219,0,32	0/0:22,0:21:57.19:0,57,1621	0/0:19,0:19:53.78:0,54,1070	0/0:23,0:22:57.18:0,57,925	0/0:22,0:21:63.21:0,63,2115	0/0:18,0:18:35.83:0,36,918	0/0:17,0:17:35.98:0,36,1215	0/0:13,0:13:27.09:0,27,900	0/0:30,0:30:66.21:0,66,1845	0/0:26,0:26:78.27:0,78,2593	0/0:23,0:20:63.22:0,63,2621	0/0:13,0:13:36.12:0,36,1093
chr10	67458193	.	CATCTATCT	C	3634.34	PASS	AB=0.919;AC=29;AF=0.580;AN=50;BaseQRankSum=-5.027;DP=566;FS=0.000;HRun=0;HaplotypeScore=150.6577;InbreedingCoeff=0.5101;MQ=52.44;MQ0=7;MQRankSum=-4.310;QD=10.47;ReadPosRankSum=-2.182;VQSLOD=2.3529;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:19,0:16:0.13:0,0,0	0/1:8,0:8:0.05:0,0,0	./.	./.	0/1:18,0:17:17.93:38,0,18	1/1:10,10:19:15.05:239,15,0	0/1:18,0:18:0:0,0,0	./.	1/1:5,8:13:6.02:148,6,0	0/1:20,9:29:99:497,0,168	0/1:12,5:17:0:0,0,0	1/1:12,4:16:18.05:321,18,0	0/0:10,0:17:8.98:0,9,73	1/1:6,7:13:3.01:74,3,0	1/1:16,17:29:12:203,12,0	1/1:11,0:27:8.73:51,9,0	1/1:17,0:17:0.30:1,0,0	1/1:19,0:19:24.14:513,24,0	0/1:15,2:17:99:122,0,156	0/0:26,0:28:35.42:0,35,242	0/0:17,0:18:16.55:0,17,95	1/1:8,9:17:0.47:2,0,0	0/0:11,0:22:14.97:0,15,121	0/0:8,0:16:14.97:0,15,122	0/0:31,0:36:45.50:0,46,328	1/1:13,17:31:48.15:988,48,0	0/0:10,0:19:8.98:0,9,73	1/1:5,7:12:21.07:437,21,0
chr10	67458208	.	CT	C	197.28	PASS	AB=0.838;AC=4;AF=0.071;AN=56;BaseQRankSum=3.287;DP=531;FS=1.273;HRun=1;HaplotypeScore=103.9266;InbreedingCoeff=0.3336;MQ=51.59;MQ0=14;MQRankSum=0.550;QD=4.38;ReadPosRankSum=0.540;VQSLOD=0.3521;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:16,4:17:30.82:131,0,31	1/1:7,2:9:6.02:84,6,0	0/0:11,0:4:11.07:0,11,139	0/0:8,0:4:9.03:0,9,137	0/0:19,0:18:14.45:0,14,152	0/0:22,0:20:47.72:0,48,614	0/0:17,0:17:39.13:0,39,593	0/0:28,0:26:75.17:0,75,1082	0/0:13,0:13:12.85:0,13,183	0/0:28,0:28:67.14:0,67,913	0/0:13,0:12:17.73:0,18,275	0/0:16,0:16:39.03:0,39,482	0/0:17,0:16:27.19:0,27,370	0/0:14,0:14:12.15:0,12,184	0/0:28,0:24:41.24:0,41,516	0/0:20,0:20:23.90:0,24,267	0/1:13,3:15:75.70:88,0,76	0/0:27,0:24:50.53:0,51,605	0/0:16,0:14:39.26:0,39,540	0/0:25,0:24:44.02:0,44,511	0/0:17,0:16:40.20:0,40,486	0/0:17,0:16:17.53:0,18,247	0/0:19,0:18:21.03:0,21,243	0/0:15,0:15:25.84:0,26,293	0/0:31,0:31:46.71:0,47,476	0/0:28,0:28:57.21:0,57,697	0/0:19,0:17:28.75:0,29,371	0/0:18,0:18:39.50:0,39,367
chr10	67459575	.	G	GAC	1694.67	PASS	AB=0.917;AC=25;AF=0.481;AN=52;BaseQRankSum=0.260;DP=605;FS=0.000;HRun=0;HaplotypeScore=105.0707;InbreedingCoeff=0.0004;MQ=68.03;MQ0=12;MQRankSum=-0.156;QD=4.03;ReadPosRankSum=-1.577;VQSLOD=2.0633;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:31,0:31:35.81:173,0,36	1/1:7,0:6:6.11:18,6,0	./.	./.	0/1:8,0:25:0:0,0,0	0/1:20,1:21:26.51:27,0,135	0/1:35,0:36:19.86:20,0,265	1/1:34,0:33:1.63:20,2,0	0/0:21,0:23:23.90:0,24,187	0/0:34,0:36:32.92:0,33,292	0/1:26,0:27:10.22:10,0,164	0/1:13,1:18:29.83:30,0,70	0/1:11,0:11:2.42:2,0,100	0/0:14,0:14:17.99:0,18,169	0/1:11,4:15:20.35:103,0,20	0/0:9,0:9:12.03:0,12,130	1/1:40,0:41:9.78:236,10,0	0/1:11,11:23:6.90:247,0,7	1/1:11,7:17:21.12:221,21,0	1/1:8,8:17:1.31:247,1,0	1/1:18,15:35:12.04:176,12,0	0/1:11,0:11:23.49:23,0,53	0/0:8,0:9:11.83:0,12,93	0/0:21,0:21:27.02:0,27,274	0/0:20,0:20:24.06:0,24,259	0/1:17,3:20:78.55:90,0,79	0/1:11,0:11:8.49:116,0,8	0/1:10,5:16:47.99:97,0,48
chr10	67459609	.	CACACACACAG	C	227.40	PASS	AB=0.645;AC=1;AF=0.018;AN=56;BaseQRankSum=3.565;DP=593;FS=3.861;HRun=0;HaplotypeScore=153.3494;InbreedingCoeff=0.1337;MQ=58.32;MQ0=27;MQRankSum=0.568;QD=11.37;ReadPosRankSum=-2.166;VQSLOD=2.4575;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:34:0,34,1423	0/0:9,0:8:12.31:0,12,141	0/0:22,0:11:31.09:0,31,264	0/0:20,0:7:14.05:0,14,190	0/0:28,0:26:11.70:0,12,109	0/0:21,0:21:57.11:0,57,1559	0/0:29,0:28:59.61:0,60,2270	0/1:9,11:17:9.69:302,0,10	0/0:23,0:21:41.30:0,41,1625	0/0:38,0:37:99:0,111,3489	0/0:25,0:23:49.37:0,49,1679	0/0:17,0:17:36:0,36,925	0/0:15,0:14:39.09:0,39,1128	0/0:13,0:13:36.11:0,36,1468	0/0:15,0:14:30.05:0,30,862	0/0:14,0:13:33:0,33,966	0/0:39,0:39:36.71:0,37,1406	0/0:24,0:23:49.67:0,50,1604	0/0:21,0:20:53.28:0,53,1292	0/0:19,0:19:42.03:0,42,1280	0/0:36,0:34:45.06:0,45,1141	0/0:15,0:15:35.83:0,36,1044	0/0:13,0:13:21.48:0,21,768	0/0:21,0:21:54.11:0,54,2092	0/0:17,0:17:38.96:0,39,1556	0/0:17,0:17:51.08:0,51,1560	0/0:13,0:13:39.05:0,39,1130	0/0:19,0:19:48.08:0,48,1435
chr10	67459617	.	C	CAG	859.68	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=6.133;DP=608;FS=13.063;HRun=0;HaplotypeScore=95.9088;InbreedingCoeff=0.2737;MQ=60.89;MQ0=23;MQRankSum=-0.720;QD=3.72;ReadPosRankSum=0.387;VQSLOD=1.6443;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:5,25:31:15.68:350,16,0	1/1:1,0:8:9.09:41,9,0	0/0:23,0:14:29.87:0,30,271	0/0:17,0:7:13.54:0,14,109	0/0:28,0:26:11.99:0,12,100	0/0:19,0:19:24.40:0,24,388	0/0:29,0:29:43.94:0,44,570	0/0:16,0:22:56.83:0,57,451	0/0:20,0:18:30.01:0,30,302	0/0:35,0:34:87.08:0,87,882	0/0:24,0:22:44.60:0,45,420	0/0:18,0:18:10.38:0,10,217	0/0:16,0:15:36.35:0,36,320	0/0:13,0:13:24.02:0,24,260	0/1:15,0:14:9.90:10,0,180	0/0:16,0:15:33.01:0,33,337	1/1:6,1:40:30.43:362,30,0	0/1:25,0:24:89.63:90,0,140	0/1:22,0:21:33.21:33,0,213	0/1:20,0:20:75.42:75,0,189	0/1:36,0:34:36.66:37,0,222	0/0:17,0:17:34.09:0,34,287	0/0:15,0:15:23.98:0,24,228	0/0:23,0:23:50.99:0,51,521	0/0:21,0:21:47.99:0,48,516	0/0:19,0:19:11.82:0,12,378	0/1:15,0:15:13.07:13,0,162	0/1:18,0:18:16.16:16,0,175
chr10	67461062	.	CA	C	443.21	PASS	AB=0.923;AC=4;AF=0.071;AN=56;BaseQRankSum=9.561;DP=488;FS=102.184;HRun=1;HaplotypeScore=68.2439;InbreedingCoeff=0.3261;MQ=86.59;MQ0=0;MQRankSum=-2.950;QD=5.28;ReadPosRankSum=4.802;VQSLOD=-0.5275;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:33,2:35:86.05:138,0,86	0/0:7,0:7:4.81:0,5,47	0/0:30,0:28:67.31:0,67,740	0/0:18,0:16:9.96:0,10,287	0/0:15,0:15:14.94:0,15,161	0/0:14,0:14:30.56:0,31,407	0/0:17,0:17:36.58:0,37,486	1/1:11,2:13:30.76:257,31,0	0/0:15,0:15:35.29:0,35,416	0/0:9,0:9:15.08:0,15,193	0/0:14,0:14:39.04:0,39,434	0/0:20,0:20:52.50:0,52,532	0/0:9,0:9:27.04:0,27,308	0/0:14,0:14:28.99:0,29,359	0/0:22,0:22:59.74:0,60,689	0/0:6,0:6:18.06:0,18,236	0/1:32,4:36:55.80:162,0,56	0/0:25,0:25:53.80:0,54,758	0/0:16,0:16:5.88:0,6,377	0/0:13,0:13:36.07:0,36,429	0/0:28,0:28:76.73:0,77,870	0/0:17,0:17:42.54:0,43,477	0/0:14,0:14:29.18:0,29,346	0/0:26,0:26:62.77:0,63,954	0/0:14,1:15:14.58:0,15,412	0/0:18,0:18:11.20:0,11,457	0/0:12,0:12:6.58:0,7,273	0/0:9,0:9:5.06:0,5,145
chr10	67461063	.	AC	A	1741.51	PASS	AB=0.861;AC=17;AF=0.304;AN=56;BaseQRankSum=4.915;DP=484;FS=11.628;HRun=10;HaplotypeScore=62.8861;InbreedingCoeff=0.0971;MQ=86.02;MQ0=0;MQRankSum=-0.797;QD=7.51;ReadPosRankSum=4.458;VQSLOD=0.5828;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,25:34:77.01:656,77,0	1/1:2,5:7:2.99:26,3,0	0/0:30,0:27:47.50:0,48,445	0/0:17,1:16:5.37:0,5,216	1/1:4,9:14:3.93:189,4,0	0/0:12,1:13:1.02:0,1,216	0/1:13,2:16:10.19:10,0,319	0/0:12,0:12:2.63:0,3,14	0/0:13,2:15:7.03:0,7,306	0/1:8,1:9:13.73:14,0,72	0/0:12,0:13:24.05:0,24,251	0/1:18,2:20:13.02:13,0,318	0/0:9,0:9:21.03:0,21,215	0/0:14,1:15:3.85:0,4,245	0/0:21,0:22:53.16:0,53,588	0/0:6,0:6:18.03:0,18,190	1/1:10,27:37:92.95:807,93,0	0/1:23,3:26:5.97:6,0,606	0/1:14,2:16:7.13:7,0,142	0/0:13,0:13:27.03:0,27,274	0/0:25,3:29:16.88:0,17,607	0/0:15,1:16:9.60:0,10,300	0/1:12,2:14:23.81:24,0,196	0/0:25,1:26:46.18:0,46,712	0/0:15,0:15:4.37:0,4,258	0/1:16,2:18:18.24:18,0,316	0/1:9,3:12:51.01:51,0,164	0/1:5,4:9:78.41:83,0,78
chr10	67463633	.	T	TA	756.26	PASS	AB=0.818;AC=9;AF=0.161;AN=56;BaseQRankSum=-4.571;DP=549;FS=2.719;HRun=14;HaplotypeScore=76.1571;InbreedingCoeff=0.4709;MQ=70.74;MQ0=0;MQRankSum=-1.130;QD=5.25;ReadPosRankSum=-2.000;VQSLOD=2.1014;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:12,31:43:0.42:244,0,0	1/1:3,10:13:24.43:203,24,0	0/0:18,0:16:19.22:0,19,106	0/0:8,0:7:3.79:0,4,22	1/1:3,18:21:44.67:344,45,0	0/0:16,0:16:32.40:0,32,210	0/1:20,2:23:0.49:0,0,242	0/0:7,0:23:31.18:0,31,101	0/0:14,0:14:20.53:0,21,133	0/1:16,2:21:16.29:16,0,143	0/0:11,1:13:5.41:0,5,86	0/0:20,0:20:12.41:0,12,188	0/0:10,0:10:15.91:0,16,99	0/0:15,0:15:3.25:0,3,129	0/0:25,0:28:54.08:0,54,335	0/0:23,0:23:45.43:0,45,291	0/1:9,14:23:20.54:88,0,21	0/0:23,1:26:22.88:0,23,268	0/0:22,0:26:40.34:0,40,231	0/0:15,0:16:33.78:0,34,197	0/0:11,0:13:27.66:0,28,165	0/0:19,0:19:32.69:0,33,214	0/0:12,0:16:27.38:0,27,165	0/0:24,1:26:32.28:0,32,326	0/0:25,1:27:13.95:0,14,207	0/0:19,0:19:37.43:0,37,233	0/0:21,0:22:14.70:0,15,162	0/0:7,0:7:14.26:0,14,85
chr10	67463882	.	CTTCTTT	C	842.29	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=1.874;DP=475;FS=1.615;HRun=0;HaplotypeScore=108.7905;InbreedingCoeff=0.9329;MQ=73.50;MQ0=4;MQRankSum=0.889;QD=31.20;ReadPosRankSum=-2.803;VQSLOD=3.0085;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:46:99:0,101,1368	0/0:12,0:12:21.07:0,21,333	0/0:31,0:14:11.66:0,12,357	0/0:26,0:14:20.29:0,20,317	0/0:23,0:23:63.15:0,63,1179	0/0:11,0:11:33.11:0,33,910	0/0:15,0:15:45.09:0,45,1167	1/1:1,26:27:71.33:937,71,0	0/0:11,0:11:33.06:0,33,772	0/0:15,0:15:39.09:0,39,876	0/0:21,0:21:54.11:0,54,1199	0/0:8,0:8:21.05:0,21,490	0/0:9,0:9:27.03:0,27,554	0/0:6,0:7:20.92:0,21,439	0/0:10,0:10:24.07:0,24,720	0/0:11,0:11:33.07:0,33,727	0/0:26,0:25:48.08:0,48,682	0/0:14,0:14:40.59:0,41,932	0/0:23,0:22:66.10:0,66,1086	0/0:9,0:7:17.97:0,18,201	0/0:8,0:8:21.07:0,21,490	0/0:11,0:11:27.04:0,27,561	0/0:18,0:17:44.92:0,45,883	0/0:13,0:12:36.12:0,36,1155	0/0:18,0:18:48.59:0,49,1021	0/0:20,0:21:60.15:0,60,1295	0/0:21,0:22:66.09:0,66,1356	0/0:8,0:8:21.06:0,21,626
chr10	67463885	.	CTT	C	738.60	PASS	AB=0.896;AC=10;AF=0.179;AN=56;BaseQRankSum=1.016;DP=506;FS=1.262;HRun=16;HaplotypeScore=77.7693;InbreedingCoeff=0.7040;MQ=69.88;MQ0=8;MQRankSum=1.650;QD=4.50;ReadPosRankSum=3.200;VQSLOD=-0.6714;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:17,28:49:22.84:408,23,0	1/1:3,8:11:0.64:86,1,0	0/0:37,0:13:18.71:0,19,145	0/1:24,0:14:2.14:2,0,129	0/1:18,3:24:8.64:9,0,180	0/0:16,0:15:36.84:0,37,374	0/0:14,0:15:45.13:0,45,553	1/1:27,0:26:16.48:85,16,0	0/0:12,0:12:24.02:0,24,300	0/0:16,0:18:31.25:0,31,332	0/0:15,0:19:31.61:0,32,325	0/0:8,0:9:20.21:0,20,196	0/0:9,0:9:17.98:0,18,192	0/0:6,0:7:20.20:0,20,175	0/0:12,0:12:21.07:0,21,273	0/0:13,0:13:33.05:0,33,350	1/1:7,18:24:35.84:300,36,0	0/0:16,0:16:33.86:0,34,365	0/0:24,0:23:34.77:0,35,351	0/0:8,0:6:5.46:0,5,29	0/0:10,0:10:23.95:0,24,226	0/0:11,0:11:17.77:0,18,180	0/0:18,0:17:31.77:0,32,310	0/0:14,0:13:36.11:0,36,461	0/0:14,0:18:29.21:0,29,251	0/0:20,0:21:39.57:0,40,365	0/0:25,0:25:44.59:0,45,463	0/0:9,0:9:27.06:0,27,321
chr10	67464261	.	AACAC	A	227.52	PASS	AB=0.844;AC=8;AF=0.160;AN=50;BaseQRankSum=4.054;DP=607;FS=6.559;HRun=0;HaplotypeScore=103.6394;InbreedingCoeff=0.4374;MQ=67.03;MQ0=11;MQRankSum=-1.356;QD=1.75;ReadPosRankSum=-2.097;VQSLOD=1.2269;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:25,6:32:9.07:182,9,0	./.	./.	./.	0/0:10,0:12:7.49:0,7,102	0/0:18,0:19:8.77:0,9,131	0/0:24,0:24:15.52:0,16,299	1/1:26,0:25:5.94:41,6,0	0/0:19,0:19:12.02:0,12,214	0/0:20,0:20:17.76:0,18,249	0/0:11,0:11:12.04:0,12,253	0/0:13,0:15:8.77:0,9,151	0/0:21,0:20:15.05:0,15,338	0/1:23,3:26:22.06:22,0,355	0/0:24,0:25:5.74:0,6,55	1/1:20,1:26:2.93:28,3,0	0/1:14,5:19:63.75:83,0,64	0/0:24,0:25:37.04:0,37,569	0/0:14,0:13:6.02:0,6,112	0/0:15,0:14:6.02:0,6,87	0/0:50,0:50:50.85:0,51,963	0/0:17,0:20:23.55:0,24,409	0/0:16,0:16:14.77:0,15,245	0/0:38,0:37:42.08:0,42,742	0/0:11,0:11:12.03:0,12,177	0/0:21,0:20:24.06:0,24,399	0/0:17,0:17:9.50:0,10,173	0/0:8,0:8:14.79:0,15,258
chr10	67464441	.	AAC	A	325.24	PASS	AB=0.985;AC=20;AF=0.357;AN=56;BaseQRankSum=3.827;DP=499;FS=0.899;HRun=0;HaplotypeScore=73.7528;InbreedingCoeff=-0.1732;MQ=72.79;MQ0=11;MQRankSum=0.127;QD=1.11;ReadPosRankSum=0.923;VQSLOD=1.5693;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:29:4.33:4,0,93	1/1:9,0:9:2.80:13,3,0	0/0:27,0:23:11.74:0,12,105	0/0:40,0:27:6.02:0,6,84	1/1:10,1:10:17.46:157,17,0	0/1:15,0:14:18.48:18,0,162	0/1:23,0:22:0.73:1,0,360	0/0:24,0:24:0.47:0,0,1	0/1:15,0:15:19.08:19,0,126	0/1:13,0:13:4.15:4,0,222	0/0:4,0:4:3.01:0,3,44	0/0:10,0:10:7.49:0,7,266	0/0:17,0:17:15.52:0,16,219	0/0:16,0:15:15.05:0,15,222	0/1:12,0:12:21.64:22,0,122	0/0:25,0:23:21.52:0,22,287	1/1:17,0:17:2.74:12,3,0	0/1:12,0:12:22.27:22,0,90	0/0:16,0:15:12.01:0,12,156	0/0:20,0:19:0.33:0,0,302	0/1:28,0:28:8.49:8,0,320	0/1:12,3:15:15.74:16,0,178	0/1:17,0:17:12.72:13,0,195	0/1:24,1:24:22.55:23,0,501	0/1:16,0:16:40.74:41,0,234	0/1:23,0:22:81.54:82,0,149	0/1:12,0:12:21.48:21,0,120	0/0:7,0:7:12.01:0,12,136
chr10	67464466	.	ACACACACACT	A	442.02	PASS	AB=0.792;AC=10;AF=0.179;AN=56;BaseQRankSum=2.524;DP=620;FS=2.785;HRun=0;HaplotypeScore=154.5192;InbreedingCoeff=0.5865;MQ=49.84;MQ0=28;MQRankSum=-2.313;QD=3.35;ReadPosRankSum=-3.490;VQSLOD=1.7657;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:41,0:39:3.15:83,3,0	1/1:6,8:14:4.05:98,4,0	0/1:19,0:8:0.85:1,0,18	0/0:27,0:9:8.04:0,8,59	1/1:21,0:20:16.98:91,17,0	0/0:17,0:16:29.08:0,29,654	0/0:37,0:35:39.76:0,40,1017	1/1:16,0:14:35.82:276,36,0	0/0:18,0:16:10.86:0,11,388	0/0:26,0:24:36.59:0,37,1058	0/0:11,0:9:4.89:0,5,194	0/0:19,0:19:25.56:0,26,672	0/0:18,0:17:5.47:0,5,528	0/0:23,0:21:33.24:0,33,829	0/0:14,0:14:8.58:0,9,337	0/0:22,0:20:31.78:0,32,860	0/1:6,15:20:5.14:38,0,5	0/0:15,0:15:21.42:0,21,535	0/0:17,0:14:23.86:0,24,723	0/0:23,0:22:47.12:0,47,1191	0/0:41,0:38:16.25:0,16,1055	0/0:18,0:16:27:0,27,544	0/0:25,0:24:30.47:0,30,730	0/0:39,0:38:45.59:0,46,2091	0/0:20,0:19:32.86:0,33,768	0/0:26,0:24:3.29:0,3,873	0/0:17,0:17:1.06:0,1,448	0/0:15,0:15:10.73:0,11,699
chr10	67464468	.	ACACACACT	A	712.28	PASS	AB=0.991;AC=13;AF=0.232;AN=56;BaseQRankSum=2.703;DP=620;FS=0.000;HRun=0;HaplotypeScore=136.2195;InbreedingCoeff=0.4617;MQ=48.77;MQ0=30;MQRankSum=-0.431;QD=3.47;ReadPosRankSum=-4.398;VQSLOD=0.9760;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,29:37:9.03:200,9,0	1/1:14,0:14:3.98:66,4,0	0/1:18,0:6:0.85:1,0,18	0/0:26,0:7:8.04:0,8,59	1/1:21,0:20:19.52:123,20,0	0/0:17,0:16:28.65:0,29,509	0/0:34,0:32:39.76:0,40,797	1/1:21,0:19:50.73:390,51,0	0/1:18,0:16:7.55:8,0,254	0/0:26,0:24:34.44:0,34,815	0/1:12,0:10:1.93:2,0,167	0/0:20,0:20:28.23:0,28,514	0/0:18,0:17:3.02:0,3,394	0/0:23,0:21:33.17:0,33,688	0/0:14,0:14:8.58:0,9,288	0/0:23,0:20:23.88:0,24,746	0/1:20,1:20:6.99:74,0,7	0/0:15,0:15:16.74:0,17,409	0/0:17,0:14:23.87:0,24,586	0/0:23,0:22:25.23:0,25,900	0/1:41,0:38:1.75:2,0,759	0/0:19,0:17:6.52:0,7,412	0/0:25,0:24:29.99:0,30,604	0/0:39,0:38:45.58:0,46,1666	0/0:18,0:18:32.37:0,32,601	0/0:25,0:23:3.58:0,4,665	0/0:17,0:17:3.71:0,4,372	0/0:15,0:15:10.69:0,11,556
chr10	67464474	.	ACT	A	758.94	PASS	AB=0.982;AC=19;AF=0.339;AN=56;BaseQRankSum=6.431;DP=615;FS=3.341;HRun=0;HaplotypeScore=88.0726;InbreedingCoeff=0.1128;MQ=48.79;MQ0=36;MQRankSum=-2.633;QD=2.31;ReadPosRankSum=-1.944;VQSLOD=0.9250;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:34,0:32:8.91:61,9,0	1/1:11,0:11:2.56:21,3,0	0/1:20,0:6:0.93:1,0,25	0/0:25,0:5:0.62:0,1,45	1/1:22,1:22:19.01:98,19,0	0/0:16,0:15:19.05:0,19,291	0/0:33,0:31:12.55:0,13,423	1/1:9,14:21:62.70:484,63,0	0/1:17,0:15:34:34,0,115	0/1:26,0:24:15.82:16,0,350	0/1:12,0:10:1.95:2,0,143	0/1:23,0:22:9.46:9,0,254	0/0:17,0:16:2.26:0,2,196	0/0:24,0:22:35.21:0,35,339	0/0:16,0:16:14.60:0,15,192	0/0:23,0:20:25.55:0,26,373	0/1:20,0:19:2.35:38,0,2	0/1:17,0:17:26.10:26,0,177	0/0:13,0:11:17.67:0,18,243	0/0:25,0:24:7.77:0,8,283	0/1:39,0:35:51.05:51,0,270	0/1:18,0:16:0.51:1,0,152	0/0:20,6:25:19.97:0,20,241	0/0:37,0:36:11.02:0,11,575	0/1:21,0:19:22.29:22,0,194	0/1:19,6:22:56.47:56,0,272	0/0:16,0:16:6.93:0,7,195	0/0:14,0:14:10.68:0,11,243
chr10	67464476	.	TCACACA	T	63.49	PASS	AB=1.000;AC=8;AF=0.143;AN=56;BaseQRankSum=4.349;DP=615;FS=14.176;HRun=0;HaplotypeScore=124.1205;InbreedingCoeff=0.5824;MQ=49.78;MQ0=38;MQRankSum=-1.945;QD=0.57;ReadPosRankSum=0.910;VQSLOD=1.6545;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:35,0:33:13.48:64,0,13	1/1:11,0:11:2.77:38,3,0	0/0:21,0:5:4.74:0,5,33	0/0:28,0:6:8.99:0,9,100	1/1:10,11:20:1.88:23,2,0	0/0:16,0:15:29.95:0,30,550	0/0:32,0:30:44.96:0,45,715	0/1:24,0:21:0.03:0,0,0	0/0:17,0:15:11.77:0,12,215	0/0:27,0:26:58.05:0,58,890	0/0:12,0:10:22.78:0,23,311	0/0:22,0:22:36.09:0,36,567	0/0:17,0:16:24.04:0,24,399	0/0:23,0:22:30.50:0,30,638	0/0:16,0:16:15.05:0,15,332	0/0:23,0:20:36.26:0,36,724	1/1:20,0:19:5.79:56,6,0	0/0:16,0:17:38.26:0,38,537	0/0:12,0:12:30.05:0,30,588	0/0:25,0:24:33.11:0,33,771	0/0:38,0:35:41.34:0,41,723	0/0:16,0:14:16.31:0,16,389	0/0:25,0:25:30.10:0,30,609	0/0:37,0:36:57.23:0,57,1323	0/0:21,0:19:29.10:0,29,520	0/0:24,0:22:42.14:0,42,778	0/0:16,0:16:26.10:0,26,415	0/0:13,0:13:30.08:0,30,571
chr10	67465153	.	CT	C	686.25	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.841;DP=516;FS=3.918;HRun=2;HaplotypeScore=53.0632;InbreedingCoeff=0.9568;MQ=70.44;MQ0=0;MQRankSum=-1.108;QD=31.19;ReadPosRankSum=-3.680;VQSLOD=2.1636;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:87.29:0,87,1286	0/0:4,0:4:12.04:0,12,179	0/0:17,0:17:37.78:0,38,589	0/0:21,1:22:44.47:0,44,583	0/0:8,0:8:21.07:0,21,312	0/0:16,0:16:45.15:0,45,673	0/0:26,0:26:75.23:0,75,1078	1/1:0,22:22:66.10:781,66,0	0/0:20,0:20:60.18:0,60,871	0/0:13,0:14:39.12:0,39,554	0/0:10,0:10:27.08:0,27,379	0/0:22,0:22:63.20:0,63,913	0/0:19,0:19:57.18:0,57,830	0/0:13,0:13:39.11:0,39,544	0/0:19,0:19:57.19:0,57,854	0/0:18,0:18:54.16:0,54,771	0/0:24,0:24:72.21:0,72,1037	0/0:31,0:31:93.01:0,93,1311	0/0:12,0:12:33.10:0,33,463	0/0:10,0:10:30.09:0,30,420	0/0:41,0:41:99:0,123,1722	0/0:6,0:6:18.05:0,18,244	0/0:12,0:12:36.11:0,36,514	0/0:36,0:36:99:0,105,1551	0/0:13,0:13:39.13:0,39,577	0/0:19,0:19:51.17:0,51,761	0/0:22,0:22:63.18:0,63,892	0/0:11,0:11:33.09:0,33,472
chr10	67466139	.	GC	G	536.36	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.120;DP=693;FS=11.284;HRun=7;HaplotypeScore=77.2374;InbreedingCoeff=0.9966;MQ=81.11;MQ0=1;MQRankSum=-2.065;QD=18.50;ReadPosRankSum=-2.852;VQSLOD=1.8628;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:49:99:0,135,1683	0/0:10,0:10:27.09:0,27,337	0/0:26,0:26:54.15:0,54,647	0/0:17,0:17:40.36:0,40,421	0/0:20,0:20:57.17:0,57,704	0/0:16,0:16:39.11:0,39,476	0/0:22,0:22:54.16:0,54,666	1/1:8,21:29:63.11:631,63,0	0/0:36,0:36:99:0,99,1222	0/0:22,0:22:66.19:0,66,807	0/0:19,0:19:48.12:0,48,575	0/0:13,0:13:36.11:0,36,447	0/0:26,0:26:66.20:0,66,814	0/0:21,0:21:63.19:0,63,778	0/0:26,0:26:78.24:0,78,966	0/0:22,0:22:54.17:0,54,677	0/0:37,0:37:99:0,108,1301	0/0:16,0:16:36.09:0,36,437	0/0:29,0:29:75.24:0,75,933	0/0:26,0:26:72.23:0,72,904	0/0:40,0:40:99:0,114,1410	0/0:25,0:25:63.16:0,63,755	0/0:21,0:21:60.19:0,60,754	0/0:41,0:41:99:0,117,1426	0/0:21,0:21:60.18:0,60,743	0/0:26,0:26:66.21:0,66,830	0/0:28,0:28:75.23:0,75,931	0/0:8,0:8:24.08:0,24,302
chr10	67469602	.	AAAAAAG	A	255.88	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.107;DP=546;FS=1.067;HRun=0;HaplotypeScore=114.6369;InbreedingCoeff=0.9248;MQ=54.41;MQ0=12;MQRankSum=1.755;QD=10.66;ReadPosRankSum=0.101;VQSLOD=2.6307;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:39:74.76:0,75,746	0/0:13,0:13:33.04:0,33,372	0/0:15,0:9:26.97:0,27,400	0/0:7,0:5:8.42:0,8,157	1/1:8,16:23:18.29:347,18,0	0/0:14,0:14:30.05:0,30,701	0/0:20,0:20:56.84:0,57,867	0/0:32,0:30:51.31:0,51,633	0/0:13,0:12:33.08:0,33,589	0/0:23,0:23:55.04:0,55,1189	0/0:18,0:18:38.28:0,38,701	0/0:13,0:13:30.08:0,30,644	0/0:15,0:15:45:0,45,694	0/0:13,0:13:36.01:0,36,607	0/0:22,0:22:57.89:0,58,1026	0/0:15,0:15:40.23:0,40,775	0/0:27,0:23:57.04:0,57,647	0/0:25,0:23:57.87:0,58,1025	0/0:25,0:25:60.35:0,60,878	0/0:23,0:22:57.66:0,58,1264	0/0:11,0:11:24.17:0,24,439	0/0:11,0:11:26.29:0,26,335	0/0:11,0:11:32.53:0,33,569	0/0:21,0:19:34.38:0,34,593	0/0:25,0:25:60.05:0,60,1263	0/0:24,0:24:32.01:0,32,958	0/0:25,0:24:61.35:0,61,1291	0/0:18,0:17:47.80:0,48,722
chr10	67470521	.	A	AAAGAG	6206.71	PASS	AB=0.571;AC=13;AF=0.232;AN=56;BaseQRankSum=-10.381;DP=617;FS=3.059;HRun=0;HaplotypeScore=105.4757;InbreedingCoeff=0.8244;MQ=72.22;MQ0=9;MQRankSum=1.143;QD=37.85;ReadPosRankSum=0.941;VQSLOD=4.8071;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,23:30:45.15:1293,45,0	1/1:0,10:10:20.99:557,21,0	0/0:31,0:23:2.80:0,3,333	0/0:51,0:25:1.64:0,2,218	1/1:5,22:28:50.75:1040,51,0	0/0:23,0:23:69.17:0,69,1166	0/0:13,0:13:30.08:0,30,501	1/1:34,0:34:61.95:837,62,0	0/0:20,0:20:54.10:0,54,866	0/0:27,0:27:63.17:0,63,969	0/0:14,0:13:36.10:0,36,603	0/0:18,0:18:48.10:0,48,728	0/0:18,0:18:51.09:0,51,781	0/0:18,0:18:45.06:0,45,726	0/0:18,0:18:45.10:0,45,666	0/0:13,0:13:30.08:0,30,523	1/1:4,19:23:30.10:899,30,0	0/0:23,0:23:63.11:0,63,1037	0/0:25,0:23:60.08:0,60,767	0/0:30,0:29:78.05:0,78,1158	0/0:19,0:19:54.13:0,54,870	0/0:12,0:12:27.09:0,27,521	0/0:18,0:18:42.10:0,42,704	0/0:17,0:17:48.10:0,48,755	0/0:18,0:18:51.14:0,51,882	0/1:7,21:28:21.86:1221,0,22	0/0:27,0:26:72.15:0,72,1155	1/1:1,8:8:12.04:360,12,0
chr10	67471939	.	CGT	C	1621.56	PASS	AB=0.917;AC=13;AF=0.232;AN=56;BaseQRankSum=11.667;DP=706;FS=9.557;HRun=0;HaplotypeScore=94.6863;InbreedingCoeff=0.8223;MQ=61.74;MQ0=1;MQRankSum=-3.076;QD=12.97;ReadPosRankSum=-2.470;VQSLOD=2.4509;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:14,0:14:1.36:4,1,0	0/0:7,0:7:0.34:0,0,1	0/0:34,0:19:39.89:0,40,523	0/0:30,0:25:41.68:0,42,442	1/1:12,0:12:12.82:127,13,0	0/1:20,2:22:15.24:15,0,784	0/0:34,0:34:78.22:0,78,1178	1/1:20,0:20:11.76:485,12,0	0/0:25,0:25:66.16:0,66,983	0/0:32,0:32:50.64:0,51,1179	0/0:18,0:18:38.17:0,38,597	0/0:25,0:25:62.51:0,63,919	0/0:25,0:25:65.44:0,65,1047	0/0:33,0:33:89.74:0,90,1374	0/0:29,0:29:75.20:0,75,1149	0/0:22,0:22:62.95:0,63,1000	1/1:20,0:19:18.58:137,19,0	0/0:27,0:27:68.19:0,68,1002	0/0:17,0:17:42.11:0,42,583	0/0:19,0:19:47.86:0,48,699	0/0:63,2:65:92.91:0,93,2209	0/0:25,0:25:75.20:0,75,1111	0/0:14,0:14:36.12:0,36,573	0/0:47,0:47:99:0,124,1892	0/0:28,0:28:62.82:0,63,943	1/1:27,0:27:60.09:702,60,0	0/0:25,0:25:66.92:0,67,1085	1/1:10,0:10:29.75:326,30,0
chr10	67471946	.	GT	G	1288.08	PASS	AB=0.651;AC=13;AF=0.232;AN=56;BaseQRankSum=12.763;DP=695;FS=1.508;HRun=1;HaplotypeScore=84.5061;InbreedingCoeff=0.8890;MQ=61.63;MQ0=2;MQRankSum=-3.193;QD=11.60;ReadPosRankSum=-3.998;VQSLOD=0.4605;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,0:9:18.84:145,19,0	1/1:6,0:6:10.72:66,11,0	0/0:35,0:20:57.19:0,57,838	0/0:27,0:23:59.62:0,60,858	1/1:5,7:11:20.98:196,21,0	0/0:22,0:22:61.09:0,61,942	0/0:31,0:31:87.27:0,87,1345	0/1:13,9:28:70.95:211,0,71	0/0:25,0:25:75.24:0,75,1149	0/0:32,0:32:89.68:0,90,1335	0/0:20,0:20:60.19:0,60,890	0/0:24,0:24:66.21:0,66,1017	0/0:25,0:25:72.24:0,72,1127	0/0:30,0:30:90.31:0,90,1425	0/0:29,0:29:87.28:0,87,1336	0/0:22,0:22:63.21:0,63,1005	1/1:20,1:19:27.73:237,28,0	0/0:26,0:26:75.21:0,75,1152	0/0:18,0:18:51.17:0,51,785	0/0:17,0:17:51.16:0,51,788	0/0:64,0:64:99:0,181,2795	0/0:28,0:28:84.29:0,84,1327	0/0:14,0:14:42.14:0,42,657	0/0:44,0:44:99:0,129,2041	0/0:25,0:25:69.23:0,69,1079	1/1:7,15:25:47.19:411,47,0	0/0:26,0:26:78.26:0,78,1207	1/1:3,6:10:29.37:210,29,0
chr10	67471948	.	GT	G	1383.92	PASS	AB=0.784;AC=13;AF=0.232;AN=56;BaseQRankSum=12.952;DP=699;FS=4.711;HRun=1;HaplotypeScore=84.2477;InbreedingCoeff=0.8930;MQ=62.38;MQ0=2;MQRankSum=-4.834;QD=12.14;ReadPosRankSum=-4.445;VQSLOD=0.4643;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,0:9:15.86:130,16,0	1/1:6,1:7:14.76:116,15,0	0/0:33,0:20:55.63:0,56,659	0/0:27,0:23:50.19:0,50,616	1/1:11,2:12:15.72:208,16,0	0/0:22,0:22:47.66:0,48,791	0/0:32,0:32:90.18:0,90,1185	0/1:21,8:29:16.62:218,0,17	0/0:24,0:24:72.18:0,72,961	0/0:32,0:32:89.21:0,89,1182	0/0:20,0:20:51.11:0,51,743	0/0:26,0:26:72.14:0,72,927	0/0:24,0:24:69.23:0,69,986	0/0:30,0:30:87.28:0,87,1247	0/0:28,0:28:84.24:0,84,1144	0/0:24,0:24:66.21:0,66,930	1/1:21,0:19:32.12:262,32,0	0/0:25,0:25:72.20:0,72,981	0/0:18,0:18:51.11:0,51,616	0/0:16,0:16:47.73:0,48,640	0/0:65,0:65:99:0,169,2384	0/0:29,0:29:84.10:0,84,1088	0/0:14,0:14:42.14:0,42,596	0/0:44,0:44:99:0,132,1791	0/0:26,0:26:69.14:0,69,919	1/1:10,15:25:54.41:418,54,0	0/0:26,0:26:78.10:0,78,1062	1/1:4,6:10:29.75:219,30,0
chr10	67473263	.	TAC	T	254.43	PASS	AB=0.921;AC=11;AF=0.212;AN=52;BaseQRankSum=3.075;DP=667;FS=4.122;HRun=0;HaplotypeScore=95.9208;InbreedingCoeff=-0.1203;MQ=56.18;MQ0=13;MQRankSum=1.856;QD=0.84;ReadPosRankSum=1.158;VQSLOD=1.5904;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:30:0.11:0,0,1	0/0:16,0:16:8.61:0,9,85	./.	./.	0/1:17,14:32:0.39:204,0,0	0/1:20,1:21:35.04:35,0,102	0/1:30,2:31:29.04:29,0,364	0/0:25,0:23:14.39:0,14,98	0/1:31,2:33:23.27:23,0,409	0/0:26,0:26:24.05:0,24,311	0/0:13,0:13:11.76:0,12,124	0/0:20,0:20:29.88:0,30,368	0/1:18,1:21:11.04:11,0,158	0/0:19,0:19:37.34:0,37,496	0/0:26,1:27:3.55:0,4,393	0/0:20,0:20:24:0,24,289	0/0:17,0:17:6.01:0,6,67	0/1:18,2:20:7.25:7,0,255	0/0:15,0:14:3.01:0,3,45	0/1:23,1:24:12.11:12,0,171	0/0:57,1:56:8.44:0,8,542	0/1:29,1:30:36.04:36,0,235	0/0:14,0:14:14.94:0,15,156	0/1:36,6:42:13.04:13,0,559	0/1:18,1:19:14.52:15,0,140	0/0:27,0:27:29.48:0,29,266	0/0:16,0:16:23.76:0,24,339	0/0:8,0:8:0:0,0,0
chr10	67473293	.	C	CAT	973.99	PASS	AB=0.848;AC=7;AF=0.125;AN=56;BaseQRankSum=0.651;DP=766;FS=1.592;HRun=0;HaplotypeScore=107.8815;InbreedingCoeff=0.2881;MQ=55.10;MQ0=14;MQRankSum=-0.057;QD=6.49;ReadPosRankSum=-1.443;VQSLOD=3.1007;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:34,0:34:6.77:224,0,7	0/1:16,0:16:3.53:135,0,4	0/0:34,0:17:32.07:0,32,318	0/0:41,0:17:44.25:0,44,434	0/0:37,0:37:77.71:0,78,618	0/0:16,0:16:33.51:0,34,308	0/0:32,0:31:66.83:0,67,710	0/1:32,0:30:99:289,0,119	0/0:38,0:38:91.50:0,91,901	0/0:31,0:31:89.71:0,90,875	0/0:15,0:15:32.97:0,33,292	0/0:22,0:22:59.74:0,60,620	0/0:30,0:30:61.96:0,62,560	0/0:28,0:28:41.31:0,41,690	0/0:24,0:24:39.39:0,39,590	0/0:24,0:24:62.92:0,63,614	0/1:11,0:28:30.42:30,0,89	0/0:23,0:23:53.09:0,53,525	0/0:10,0:9:25.71:0,26,218	0/0:24,0:24:43.16:0,43,504	0/0:54,0:52:99:0,120,1160	0/0:33,0:32:67.75:0,68,758	0/0:14,0:14:35.95:0,36,334	0/0:47,0:47:99:0,110,1104	0/0:18,0:18:23.82:0,24,342	0/1:13,20:34:99:323,0,135	0/0:21,0:21:51.27:0,51,577	1/1:6,0:6:11.90:107,12,0
chr10	67474556	.	CCT	C	864.53	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=2.335;DP=457;FS=0.603;HRun=0;HaplotypeScore=62.0110;InbreedingCoeff=0.9171;MQ=79.63;MQ0=0;MQRankSum=-5.793;QD=13.30;ReadPosRankSum=-5.871;VQSLOD=2.1842;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:11:12.88:105,13,0	0/1:6,0:6:1.97:60,0,2	0/0:14,0:14:38.52:0,39,425	0/0:14,0:14:35.22:0,35,456	0/0:14,0:14:36.07:0,36,496	0/0:10,0:10:27.09:0,27,436	0/0:20,0:20:60.15:0,60,881	1/1:9,0:9:18.02:166,18,0	0/0:17,0:17:51.16:0,51,818	0/0:14,0:14:36.07:0,36,481	0/0:13,0:13:30.07:0,30,434	0/0:26,0:26:77.91:0,78,1157	0/0:23,0:23:57.92:0,58,961	0/0:25,0:25:75.19:0,75,1091	0/0:24,0:24:72.19:0,72,1086	0/0:19,0:19:57.13:0,57,839	1/1:12,1:12:18.60:130,19,0	0/0:18,0:18:54.10:0,54,811	0/0:13,0:13:32.86:0,33,416	0/0:8,0:8:18.02:0,18,235	0/0:33,0:33:96.26:0,96,1457	0/0:10,0:10:26.34:0,26,393	0/0:8,0:8:21.04:0,21,287	0/0:30,0:30:90.26:0,90,1410	0/0:18,0:18:17.30:0,17,680	1/1:14,5:19:39.40:428,39,0	0/0:21,0:19:63.20:0,63,985	1/1:6,1:7:19.21:151,19,0
chr10	67474557	.	CT	C	982.53	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=1.151;DP=458;FS=1.924;HRun=1;HaplotypeScore=53.6374;InbreedingCoeff=0.9831;MQ=79.61;MQ0=0;MQRankSum=-1.885;QD=15.60;ReadPosRankSum=-5.760;VQSLOD=1.2661;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:11:17.96:148,18,0	1/1:6,0:6:13.21:98,13,0	0/0:14,0:14:13.75:0,14,375	0/0:14,0:14:34.86:0,35,375	0/0:14,0:14:36.05:0,36,389	0/0:10,0:10:27.07:0,27,332	0/0:20,0:20:59.69:0,60,686	1/1:7,0:7:18.02:166,18,0	0/0:17,0:17:51.15:0,51,639	0/0:14,0:14:36.05:0,36,404	0/0:12,0:12:29.93:0,30,320	0/0:26,0:26:72.12:0,72,872	0/0:23,0:23:61.88:0,62,747	0/0:25,0:25:72.99:0,73,830	0/0:25,0:25:75.18:0,75,893	0/0:20,0:20:60.12:0,60,695	1/1:12,2:13:26.69:262,27,0	0/0:18,0:18:54.09:0,54,642	0/0:14,0:14:35.83:0,36,360	0/0:7,0:7:18:0,18,188	0/0:34,0:34:93.18:0,93,1113	0/0:10,0:10:26.08:0,26,293	0/0:9,0:9:21.03:0,21,228	0/0:30,0:30:90.25:0,90,1103	0/0:18,0:18:28.26:0,28,527	1/1:17,1:18:39.31:319,39,0	0/0:21,0:19:63.16:0,63,748	1/1:6,1:7:20.96:174,21,0
chr10	67477079	.	T	TCA	1006.53	PASS	AB=0.855;AC=4;AF=0.071;AN=56;BaseQRankSum=7.617;DP=1051;FS=13.242;HRun=0;HaplotypeScore=166.7188;InbreedingCoeff=-0.0807;MQ=61.55;MQ0=12;MQRankSum=-1.575;QD=7.80;ReadPosRankSum=-0.233;VQSLOD=2.3273;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:38,7:40:99:132,0,627	0/1:8,1:9:35.26:35,0,187	0/0:25,0:18:44.80:0,45,532	0/0:39,0:25:66.05:0,66,853	0/0:8,0:8:15.05:0,15,221	0/0:14,0:14:17.92:0,18,216	0/0:69,0:69:99:0,190,2653	0/0:30,0:27:63.19:0,63,882	0/0:55,0:55:99:0,144,2004	0/0:56,0:55:95.99:0,96,1638	0/0:15,0:14:23.75:0,24,318	0/0:66,0:66:99:0,165,2253	0/0:45,0:44:99:0,105,1455	0/0:51,0:51:99:0,135,1912	0/0:37,0:37:90.24:0,90,1233	0/0:35,0:35:56.70:0,57,1002	0/1:26,2:25:69.49:69,0,562	0/0:49,0:48:99:0,114,1629	0/0:18,0:14:33.11:0,33,486	0/0:17,0:17:11.17:0,11,369	0/0:143,0:140:99:0,373,5387	0/0:20,0:18:51.13:0,51,704	0/0:17,0:17:30.61:0,31,447	0/0:54,0:53:99:0,156,2250	0/0:34,2:35:26.96:0,27,914	0/1:29,18:43:99:880,0,719	0/0:17,0:17:32.97:0,33,394	0/0:5,0:4:12.04:0,12,170
chr10	67477372	.	GTTCACATGTCA	G	387.03	PASS	AB=0.948;AC=6;AF=0.111;AN=54;BaseQRankSum=7.277;DP=1158;FS=19.122;HRun=0;HaplotypeScore=325.4020;InbreedingCoeff=0.2407;MQ=54.20;MQ0=52;MQRankSum=1.058;QD=4.35;ReadPosRankSum=-5.091;VQSLOD=0.4301;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:23,2:22:46.50:46,0,102	0/1:11,0:7:11.48:89,0,11	0/0:41,0:8:21.07:0,21,675	0/0:40,0:12:5.72:0,6,739	0/0:21,0:21:45.15:0,45,1732	0/0:28,0:28:63.22:0,63,2668	0/0:60,0:53:99:0,126,5044	1/1:13,0:8:9.10:26,9,0	0/0:69,0:69:99:0,187,8423	0/0:65,0:64:99:0,169,7320	0/0:19,0:19:42.14:0,42,1787	0/0:85,0:85:99:0,220,10067	0/0:53,0:53:99:0,144,6590	0/0:68,0:68:99:0,184,8552	0/0:67,0:66:99:0,175,7114	0/0:49,0:49:79.97:0,80,5919	0/1:14,0:13:11.21:174,0,11	0/0:29,0:29:78.27:0,78,3324	0/0:18,0:13:36.12:0,36,1692	0/0:34,0:31:75.26:0,75,3317	0/0:116,0:115:99:0,289,12700	0/0:33,0:33:72.25:0,72,3353	0/0:26,0:24:60.20:0,60,2554	0/0:64,0:64:99:0,163,7726	0/0:50,0:49:99:0,118,5422	0/1:22,4:20:99:175,0,350	0/0:32,0:32:81.28:0,81,3543	./.
chr10	67479528	.	AT	A	3655.44	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=9.361;DP=632;FS=2.933;HRun=1;HaplotypeScore=65.0049;InbreedingCoeff=0.9777;MQ=79.64;MQ0=0;MQRankSum=1.162;QD=31.51;ReadPosRankSum=-1.261;VQSLOD=3.0400;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,39:39:78.14:1031,78,0	1/1:3,9:13:35.97:403,36,0	0/0:10,0:10:23.75:0,24,310	0/0:24,0:24:48.17:0,48,505	0/0:14,0:14:39.10:0,39,567	0/0:15,0:15:45.08:0,45,620	0/0:31,0:31:84.19:0,84,1188	1/1:0,23:23:66.13:804,66,0	0/0:29,0:29:87.28:0,87,1350	0/0:23,0:23:66.18:0,66,925	0/0:12,0:12:36.02:0,36,494	0/0:31,0:31:82.43:0,82,1343	0/0:21,0:21:63.21:0,63,1000	0/0:27,0:27:81.13:0,81,1178	0/0:30,0:30:87.26:0,87,1328	0/0:15,0:15:45.14:0,45,692	1/1:0,29:29:72:1000,72,0	0/0:28,0:28:84.22:0,84,1240	0/0:22,0:22:66.08:0,66,907	0/0:18,0:18:54.15:0,54,789	0/0:69,0:69:99:0,201,2898	0/0:15,0:15:45:0,45,599	0/0:15,0:15:39.12:0,39,596	0/0:36,0:36:99:0,105,1530	0/0:14,0:14:36.66:0,37,546	1/1:0,10:10:27.06:333,27,0	0/0:17,0:17:51.16:0,51,773	1/1:0,2:2:6.02:83,6,0
chr10	67480089	.	G	GCTTAT	6733.58	PASS	AB=0.545;AC=11;AF=0.196;AN=56;BaseQRankSum=-6.576;DP=318;FS=26.210;HRun=0;HaplotypeScore=60.0076;InbreedingCoeff=0.8662;MQ=75.16;MQ0=0;MQRankSum=-7.313;QD=74.00;ReadPosRankSum=-0.468;VQSLOD=3.3673;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,13:14:27.09:856,27,0	1/1:0,6:7:12.04:380,12,0	0/0:7,0:7:21.04:0,21,410	0/0:10,0:10:26.92:0,27,504	0/0:9,0:9:27.09:0,27,569	0/0:11,0:11:30.10:0,30,618	0/0:5,0:5:15.05:0,15,326	1/1:4,24:30:87.29:2455,87,0	0/0:15,0:15:42.14:0,42,862	0/0:16,0:16:48.16:0,48,1007	0/0:9,0:9:27.09:0,27,586	0/0:9,0:9:27.09:0,27,569	0/0:9,0:9:27.09:0,27,586	0/0:6,0:6:18.06:0,18,391	0/0:13,0:13:39.13:0,39,846	0/0:8,0:8:21.07:0,21,401	1/1:2,11:13:30.10:901,30,0	0/0:14,0:14:42.14:0,42,895	0/0:12,0:11:33.11:0,33,653	0/0:7,0:7:18.06:0,18,374	0/0:19,0:19:54.19:0,54,1173	0/0:11,0:11:33.11:0,33,717	0/0:7,0:7:21.07:0,21,456	0/0:5,0:5:15.05:0,15,308	0/0:12,0:12:36.12:0,36,782	0/1:2,9:12:32.04:907,0,32	0/0:13,0:13:39.09:0,39,802	1/1:0,15:15:39.13:1235,39,0
chr10	67480130	.	AAT	A	1967.98	PASS	AC=12;AF=0.231;AN=52;BaseQRankSum=4.453;DP=224;FS=17.422;HRun=0;HaplotypeScore=38.6468;InbreedingCoeff=0.7036;MQ=81.71;MQ0=3;MQRankSum=-0.827;QD=25.56;ReadPosRankSum=-1.564;VQSLOD=2.1674;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,3:9:6.26:113,6,0	1/1:1,2:3:6.02:78,6,0	0/0:8,0:4:2.95:0,3,19	0/0:25,0:17:11.08:0,11,110	0/0:5,0:5:12.04:0,12,204	0/0:13,0:13:33.11:0,33,559	0/0:3,0:3:3.01:0,3,51	1/1:16,14:30:75.24:961,75,0	0/0:5,0:5:12.04:0,12,204	0/0:7,0:7:18.06:0,18,306	0/0:4,0:4:3.01:0,3,51	0/0:5,0:5:9.03:0,9,148	0/0:1,0:1:3.01:0,3,51	0/0:2,0:2:6.02:0,6,102	0/0:9,0:9:21.07:0,21,354	0/0:3,0:3:9.03:0,9,153	1/1:5,7:11:27.06:321,27,0	0/0:12,0:12:33.11:0,33,548	0/0:14,0:13:33.11:0,33,543	./.	0/0:10,0:10:27.09:0,27,452	0/0:1,0:1:3.01:0,3,51	0/0:2,0:2:3.01:0,3,51	./.	0/0:10,0:10:24.08:0,24,408	1/1:5,4:9:18.06:233,18,0	0/0:7,0:7:18.06:0,18,302	1/1:5,9:14:33.11:428,33,0
chr10	67482145	.	CGT	C	385.55	PASS	AB=0.846;AC=12;AF=0.231;AN=52;BaseQRankSum=3.996;DP=605;FS=5.150;HRun=0;HaplotypeScore=84.9273;InbreedingCoeff=0.0366;MQ=68.56;MQ0=2;MQRankSum=0.351;QD=1.91;ReadPosRankSum=-0.334;VQSLOD=1.1893;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,1:45:5.89:0,6,390	0/0:6,0:7:9.01:0,9,98	./.	./.	0/0:9,0:14:2.50:0,3,26	0/0:20,0:20:33.06:0,33,477	0/0:36,0:37:36.11:0,36,514	1/1:17,4:21:8.92:82,9,0	0/0:22,1:23:0.28:0,0,419	0/0:13,0:13:12.04:0,12,168	0/1:9,1:10:24.13:24,0,81	0/1:16,2:18:6.08:6,0,331	0/1:11,1:14:37.35:37,0,202	0/0:19,0:19:30.10:0,30,451	0/0:20,0:20:27.05:0,27,380	0/0:11,0:20:18:0,18,157	0/0:20,0:32:44.99:0,45,454	0/0:24,0:24:30.10:0,30,451	0/0:22,0:21:6.01:0,6,73	0/1:7,4:11:45.28:45,0,184	0/1:34,4:39:21.53:22,0,464	0/0:21,0:21:27.09:0,27,405	0/0:18,0:18:15.04:0,15,194	0/1:30,2:32:21.51:22,0,509	0/1:14,2:16:45.21:45,0,193	1/1:22,9:31:17.96:183,18,0	0/0:20,0:21:6.90:0,7,227	0/1:5,4:10:18.85:68,0,19
chr10	67482608	.	A	AAG	1318.12	PASS	AB=0.660;AC=13;AF=0.232;AN=56;BaseQRankSum=5.709;DP=565;FS=9.812;HRun=0;HaplotypeScore=92.5523;InbreedingCoeff=0.8564;MQ=54.11;MQ0=10;MQRankSum=-0.095;QD=8.09;ReadPosRankSum=3.580;VQSLOD=2.6734;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:15,2:31:2.50:161,0,3	1/1:6,0:10:23.53:156,24,0	0/0:42,0:12:10.79:0,11,116	0/0:27,0:9:1.79:0,2,60	1/1:31,0:31:49.54:328,50,0	0/0:19,0:18:29.40:0,29,244	0/0:20,0:19:44.37:0,44,325	1/1:20,4:24:37.01:328,37,0	0/0:15,0:14:25.12:0,25,162	0/0:20,0:20:40.58:0,41,388	0/0:20,0:20:50.17:0,50,372	0/0:17,0:17:23.93:0,24,219	0/0:14,0:13:27.46:0,27,209	0/0:14,0:14:21.31:0,21,151	0/0:17,0:15:33.68:0,34,264	0/0:14,0:14:31.41:0,31,254	1/1:10,17:29:4.38:82,4,0	0/0:20,0:19:37.68:0,38,334	0/0:21,0:17:33.41:0,33,259	0/0:27,0:27:47.29:0,47,370	0/0:13,0:13:36:0,36,261	0/0:10,0:10:14.78:0,15,92	0/0:13,0:13:30.61:0,31,195	0/0:29,0:28:53.66:0,54,394	0/0:15,0:14:27.32:0,27,208	1/1:14,1:20:33.58:270,34,0	0/0:15,0:14:30.12:0,30,185	1/1:12,0:14:14.54:176,15,0
chr10	67482657	.	GAAA	G	1691.85	PASS	AB=0.746;AC=9;AF=0.161;AN=56;BaseQRankSum=10.237;DP=452;FS=4.618;HRun=3;HaplotypeScore=80.9245;InbreedingCoeff=0.4811;MQ=52.45;MQ0=12;MQRankSum=-3.658;QD=16.92;ReadPosRankSum=-0.448;VQSLOD=0.3401;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:17,4:21:42.41:255,0,42	1/1:2,7:9:5.13:207,5,0	0/0:11,0:4:9:0,9,124	0/0:23,0:13:36.10:0,36,619	0/0:32,0:31:60.13:0,60,476	0/0:13,0:13:36.12:0,36,822	0/0:18,0:18:51.17:0,51,1069	0/1:11,5:13:30.65:117,0,31	0/0:15,0:15:45.15:0,45,1033	0/0:18,0:18:54.19:0,54,1283	0/0:7,0:7:21.06:0,21,426	0/0:16,0:16:47.70:0,48,1018	0/0:19,0:19:54.19:0,54,1259	0/0:12,0:12:36.08:0,36,802	0/0:20,0:20:60.21:0,60,1469	0/0:11,0:11:33.11:0,33,759	1/1:6,14:20:51:542,51,0	0/0:22,0:21:57.20:0,57,1317	0/0:21,0:17:51.16:0,51,1092	0/0:10,0:9:27.09:0,27,615	0/0:14,0:14:42.14:0,42,1023	0/0:10,0:10:30.10:0,30,699	0/0:12,0:12:36.12:0,36,851	0/0:22,0:22:54.18:0,54,1163	0/0:13,0:13:39.13:0,39,924	0/1:9,12:20:15.32:466,0,15	0/0:13,0:13:39.13:0,39,867	1/1:5,8:13:1.52:247,2,0
chr10	67482660	.	AGAAG	A	4169.57	PASS	AC=14;AF=0.259;AN=54;BaseQRankSum=13.298;DP=460;FS=0.000;HRun=0;HaplotypeScore=82.7660;InbreedingCoeff=0.9812;MQ=52.73;MQ0=12;MQRankSum=-2.695;QD=31.83;ReadPosRankSum=-0.231;VQSLOD=3.2723;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:20:27.09:426,27,0	1/1:9,0:9:21.07:338,21,0	./.	0/0:22,0:12:7.94:0,8,162	1/1:6,26:31:72.24:1164,72,0	0/0:13,0:13:30.09:0,30,613	0/0:19,0:19:33.11:0,33,675	1/1:16,0:13:21.04:275,21,0	0/0:15,0:15:36.12:0,36,820	0/0:20,0:20:51.16:0,51,1108	0/0:8,0:8:21.07:0,21,435	0/0:18,0:18:45.99:0,46,944	0/0:19,0:19:36.17:0,36,1143	0/0:14,0:14:36.11:0,36,791	0/0:20,0:20:60.21:0,60,1424	0/0:11,0:11:27.09:0,27,621	1/1:20,0:20:51.17:803,51,0	0/0:23,0:22:54.17:0,54,1138	0/0:21,0:17:30.09:0,30,642	0/0:11,0:10:27.08:0,27,567	0/0:14,0:14:42.14:0,42,1010	0/0:10,0:10:30.10:0,30,654	0/0:12,0:12:33.11:0,33,742	0/0:22,0:22:17.22:0,17,859	0/0:13,0:13:39.13:0,39,890	1/1:23,0:22:50.90:782,51,0	0/0:13,0:13:30.10:0,30,628	1/1:11,0:11:24.08:382,24,0
chr10	67482663	.	AG	A	771.62	PASS	AB=0.770;AC=9;AF=0.161;AN=56;BaseQRankSum=12.744;DP=461;FS=3.002;HRun=2;HaplotypeScore=67.4422;InbreedingCoeff=0.2925;MQ=54.19;MQ0=11;MQRankSum=-4.063;QD=5.94;ReadPosRankSum=2.020;VQSLOD=1.0160;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:13,4:17:66.53:97,0,67	1/1:2,7:9:5.16:79,5,0	0/0:11,0:4:9.46:0,9,91	0/0:21,0:11:26.20:0,26,377	0/1:31,0:30:8.90:9,0,155	0/0:12,0:12:33.11:0,33,493	0/0:19,0:19:51.16:0,51,733	0/1:12,5:14:55.38:55,0,117	0/0:15,0:15:45.15:0,45,669	0/0:20,0:20:60.20:0,60,894	0/0:9,0:9:27.08:0,27,381	0/0:19,0:19:57.18:0,57,824	0/0:20,0:20:57.14:0,57,824	0/0:14,0:14:42.07:0,42,600	0/0:20,0:20:60.20:0,60,899	0/0:11,0:11:33.11:0,33,490	1/1:6,14:20:48.60:286,49,0	0/0:22,0:21:60.16:0,60,870	0/0:19,0:16:48.07:0,48,645	0/0:11,0:10:30.10:0,30,445	0/0:16,0:16:45.14:0,45,653	0/0:10,0:10:30.10:0,30,448	0/0:12,0:12:36.12:0,36,525	0/0:24,0:24:63.14:0,63,882	0/0:13,0:13:39.13:0,39,572	0/1:12,12:23:89.93:303,0,90	0/0:13,0:13:39.09:0,39,539	0/1:4,8:12:75.77:88,0,76
chr10	67482896	.	T	TA	4742.24	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-9.609;DP=565;FS=1.201;HRun=7;HaplotypeScore=53.9822;InbreedingCoeff=0.9964;MQ=70.37;MQ0=0;MQRankSum=-1.162;QD=30.21;ReadPosRankSum=-0.486;VQSLOD=4.9341;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,28:29:75.23:901,75,0	1/1:0,8:8:18.06:217,18,0	0/0:21,0:18:33:0,33,318	0/0:13,0:11:20.69:0,21,162	1/1:3,28:31:81.24:962,81,0	0/0:16,0:16:48.06:0,48,457	0/0:30,0:30:75.11:0,75,724	1/1:1,27:28:81.25:975,81,0	0/0:18,0:18:45.07:0,45,435	0/0:26,0:26:66.07:0,66,630	0/0:26,0:26:75.12:0,75,721	0/0:11,0:11:33.05:0,33,319	0/0:8,0:8:21.03:0,21,202	0/0:15,0:15:45.07:0,45,434	0/0:22,0:22:51.07:0,51,492	0/0:20,0:20:60.08:0,60,573	1/1:2,17:19:39.12:471,39,0	0/0:21,0:21:57.03:0,57,550	0/0:17,0:17:33.03:0,33,315	0/0:28,0:28:81.13:0,81,782	0/0:12,0:12:33.05:0,33,318	0/0:13,0:13:27.04:0,27,259	0/0:23,0:23:63.10:0,63,607	0/0:23,0:23:69.11:0,69,666	0/0:31,0:31:78.12:0,78,753	1/1:3,24:27:72.18:853,72,0	0/0:12,0:12:33.05:0,33,319	1/1:3,12:15:30.09:362,30,0
chr10	67483043	.	AACAC	A	926.64	PASS	AB=0.857;AC=29;AF=0.630;AN=46;BaseQRankSum=2.176;DP=512;FS=2.439;HRun=0;HaplotypeScore=80.7590;InbreedingCoeff=0.5448;MQ=66.70;MQ0=15;MQRankSum=-0.629;QD=3.86;ReadPosRankSum=0.356;VQSLOD=1.7739;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	1/1:7,0:7:3.01:43,3,0	./.	./.	0/1:20,0:23:0:0,0,0	1/1:16,1:17:9.02:136,9,0	0/0:17,2:19:0:0,0,0	0/0:18,0:18:0.47:0,0,1	1/1:8,0:8:3:28,3,0	1/1:25,0:25:3:27,3,0	1/1:10,0:10:3.01:46,3,0	1/1:11,0:11:6:54,6,0	0/0:11,0:11:9.03:0,9,152	1/1:7,1:8:6.02:85,6,0	./.	1/1:7,4:12:11.84:165,12,0	1/1:22,0:22:6.01:74,6,0	1/1:23,2:25:10.53:141,11,0	./.	1/1:8,3:10:9.03:138,9,0	1/1:31,0:30:9.85:72,10,0	0/0:20,0:20:21.05:0,21,401	0/0:11,0:11:3.01:0,3,64	0/0:30,0:32:35.86:0,36,648	1/1:11,2:12:3:28,3,0	0/0:10,0:10:3.48:0,3,49	1/1:12,0:12:3:35,3,0	0/0:16,0:18:10.30:0,10,80
chr10	67485730	.	C	CAG	6908.95	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-10.888;DP=987;FS=0.000;HRun=0;HaplotypeScore=137.1653;InbreedingCoeff=0.9965;MQ=59.16;MQ0=11;MQRankSum=1.913;QD=28.43;ReadPosRankSum=-1.340;VQSLOD=5.9231;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,60:71:40.58:1522,41,0	1/1:2,12:14:35.56:591,36,0	0/0:48,0:24:41.54:0,42,525	0/0:50,0:22:22.13:0,22,189	1/1:16,10:26:72.07:952,72,0	0/0:36,0:37:99:0,103,1236	0/0:29,0:29:74.12:0,74,823	1/1:8,31:40:89.90:1058,90,0	0/0:34,0:34:90.17:0,90,1107	0/0:38,0:38:93.26:0,93,1212	0/0:25,0:25:68.93:0,69,794	0/0:37,0:37:99:0,108,1388	0/0:22,0:22:55.66:0,56,814	0/0:36,0:36:99:0,102,1306	0/0:37,0:38:99:0,102,1309	0/0:41,0:41:99:0,121,1504	1/1:5,30:34:42.61:889,43,0	0/0:45,0:45:99:0,119,1485	0/0:25,0:25:54.03:0,54,568	0/0:21,0:21:57.11:0,57,685	0/0:86,0:87:99:0,200,2355	0/0:22,0:22:66.15:0,66,825	0/0:21,0:21:48.10:0,48,602	0/0:39,0:39:98.93:0,99,1246	0/0:29,0:29:87.10:0,87,1002	1/1:5,40:45:47.77:1633,48,0	0/0:20,0:20:50.99:0,51,567	1/1:4,6:9:15.05:263,15,0
chr10	67485838	.	CAG	C	3089.42	PASS	AB=0.984;AC=15;AF=0.268;AN=56;BaseQRankSum=15.520;DP=1017;FS=21.816;HRun=0;HaplotypeScore=195.9006;InbreedingCoeff=0.8830;MQ=60.77;MQ0=11;MQRankSum=-5.646;QD=12.98;ReadPosRankSum=-0.892;VQSLOD=1.9396;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:22,21:44:67.63:782,68,0	1/1:8,9:18:12.11:301,12,0	0/0:46,0:24:60.52:0,61,734	0/1:60,1:34:37.80:38,0,428	1/1:4,26:32:31.06:402,31,0	0/0:36,0:36:99:0,108,1720	0/0:28,0:28:81.20:0,81,1274	1/1:14,7:20:41.90:415,42,0	0/0:29,0:29:75.28:0,75,1385	0/0:52,0:52:99:0,150,2461	0/0:34,0:34:90.20:0,90,1512	0/0:26,0:26:72.18:0,72,1148	0/0:24,0:24:66.22:0,66,1165	0/0:42,0:42:99:0,102,1764	0/0:43,0:43:99:0,119,1841	0/0:44,0:44:99:0,126,2130	1/1:8,10:19:17.66:423,18,0	0/0:26,0:26:64.49:0,64,1199	0/0:27,0:24:69.08:0,69,1021	0/0:27,0:26:78.24:0,78,1320	0/0:108,0:107:99:0,276,4308	0/0:30,0:30:72.23:0,72,1372	0/0:26,0:26:78.20:0,78,1255	0/0:66,0:65:99:0,127,2643	0/0:29,0:29:61.86:0,62,1257	1/1:19,9:30:6.28:586,6,0	0/0:35,1:36:70.22:0,70,1665	1/1:3,7:11:24.45:338,24,0
chr10	67485842	.	GAC	G	928	PASS	AB=0.991;AC=11;AF=0.196;AN=56;BaseQRankSum=12.179;DP=1034;FS=10.736;HRun=0;HaplotypeScore=213.7626;InbreedingCoeff=0.4572;MQ=60.69;MQ0=14;MQRankSum=-5.594;QD=3.63;ReadPosRankSum=0.016;VQSLOD=1.7866;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:47,0:47:30.78:292,31,0	0/1:19,0:18:47.43:105,0,47	0/0:46,0:26:32.69:0,33,631	0/1:62,2:37:30.95:31,0,378	1/1:36,0:36:9.16:158,9,0	0/0:38,0:38:96.30:0,96,1511	0/0:28,0:28:66.21:0,66,1061	0/1:23,0:21:4.39:57,0,4	0/0:28,0:28:69.40:0,69,1245	0/0:51,0:51:99:0,138,2152	0/0:32,0:32:65.63:0,66,1392	0/0:26,0:26:66.21:0,66,1058	0/0:24,0:24:72.17:0,72,1115	0/0:40,1:41:70.82:0,71,1584	0/0:41,0:42:88.13:0,88,1556	0/0:43,0:43:99:0,114,1863	0/1:17,0:17:15.78:163,0,16	0/0:28,0:28:73.43:0,73,1121	0/0:28,0:25:54.12:0,54,836	0/0:28,0:28:78.22:0,78,1250	0/0:107,0:106:99:0,246,3840	0/0:28,0:28:75.22:0,75,1174	0/0:25,0:25:66.23:0,66,1085	0/0:64,1:65:87.33:0,87,2425	0/0:29,1:30:43.72:0,44,1165	0/1:38,0:38:99:131,0,197	0/0:36,0:36:80.57:0,81,1518	1/1:11,0:11:14.90:155,15,0
chr10	67487271	.	AGGG	A	470.82	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.867;DP=716;FS=1.048;HRun=3;HaplotypeScore=99.8933;InbreedingCoeff=0.9955;MQ=80.06;MQ0=0;MQRankSum=-1.996;QD=23.54;ReadPosRankSum=-0.784;VQSLOD=0.4063;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,160,3806	0/0:7,0:7:21.07:0,21,518	0/0:24,0:24:63.12:0,63,1428	0/0:12,0:12:36.12:0,36,816	1/1:0,20:20:38.87:566,39,0	0/0:23,0:23:66.23:0,66,1621	0/0:27,0:27:81.25:0,81,1873	0/0:34,0:34:99:0,102,2411	0/0:24,0:24:72.25:0,72,1724	0/0:35,0:35:99:0,102,2500	0/0:13,0:13:36.12:0,36,845	0/0:36,0:36:99:0,108,2575	0/0:23,0:23:69.17:0,69,1540	0/0:20,0:20:60.21:0,60,1441	0/0:32,0:32:96.33:0,96,2289	0/0:27,0:27:81.28:0,81,1922	0/0:32,0:32:96.33:0,96,2358	0/0:23,0:23:69.24:0,69,1643	0/0:27,0:27:78.27:0,78,1858	0/0:18,0:18:54.19:0,54,1291	0/0:43,0:43:99:0,126,3032	0/0:20,0:20:60.21:0,60,1393	0/0:12,0:12:36.10:0,36,798	0/0:38,0:38:99:0,114,2758	0/0:18,0:18:54.16:0,54,1242	0/0:32,0:32:93.32:0,93,2223	0/0:24,0:24:72.23:0,72,1686	0/0:18,0:18:54.19:0,54,1212
chr10	67487963	.	CCCTTACCTTTCCTTTCCTTGCCTTAGCAGG	C	11177.94	PASS	AB=1.000;AC=47;AF=0.839;AN=56;BaseQRankSum=-6.683;DP=387;FS=26.474;HRun=0;HaplotypeScore=259.1265;InbreedingCoeff=0.0032;MQ=64.40;MQ0=7;MQRankSum=-2.817;QD=31.76;ReadPosRankSum=-0.662;VQSLOD=2.3696;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:1,29:30:24.08:1617,24,0	1/1:2,8:10:2.64:237,3,0	0/1:16,0:8:27.46:27,0,168	0/0:35,0:20:48.37:0,48,755	1/1:1,13:14:17.96:757,18,0	0/1:15,0:15:85.24:346,0,85	1/1:19,0:18:43.10:618,43,0	1/1:13,0:11:23.99:258,24,0	1/1:3,0:2:3.01:46,3,0	0/1:12,0:11:4.10:183,0,4	1/1:13,0:13:15.65:250,16,0	1/1:9,0:9:20.87:408,21,0	1/1:5,0:5:14.72:174,15,0	1/1:8,0:8:19.02:192,19,0	0/1:10,0:10:6.10:399,0,6	1/1:9,0:9:14.18:124,14,0	1/1:2,18:20:6.02:475,6,0	1/1:9,0:9:24.03:371,24,0	0/1:21,0:19:17.33:212,0,17	0/1:9,0:9:99:239,0,109	1/1:34,0:34:20.12:627,20,0	1/1:12,0:12:0.08:168,0,0	1/1:8,0:8:14.59:195,15,0	1/1:19,0:18:35.81:549,36,0	0/1:12,0:12:58.34:235,0,58	1/1:0,16:16:45.02:2054,45,0	1/1:3,0:3:9:176,9,0	1/1:1,2:3:3.01:238,3,0
chr10	67487987	.	TAG	T	2130.17	PASS	AB=0.799;AC=53;AF=0.946;AN=56;BaseQRankSum=1.767;DP=236;FS=8.009;HRun=0;HaplotypeScore=107.3347;InbreedingCoeff=-0.0329;MQ=69.65;MQ0=3;MQRankSum=-3.934;QD=9.03;ReadPosRankSum=2.627;VQSLOD=2.9641;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:29:22.56:145,23,0	1/1:8,0:8:2.88:15,3,0	0/1:11,0:9:6.33:6,0,107	0/1:27,1:16:23.82:24,0,200	1/1:13,0:13:11.47:64,11,0	1/1:1,3:4:10.06:65,10,0	1/1:0,9:8:21.28:163,21,0	1/1:0,7:4:12:113,12,0	1/1:0,3:2:5.62:29,6,0	1/1:2,9:9:12.84:136,13,0	1/1:3,3:6:8.88:62,9,0	1/1:0,5:5:14.90:118,15,0	0/1:0,3:3:5.60:17,0,6	1/1:0,3:3:8.87:64,9,0	1/1:0,5:5:14.85:113,15,0	1/1:0,1:1:2.98:21,3,0	1/1:18,0:18:5.68:28,6,0	1/1:0,2:2:5.94:44,6,0	1/1:0,2:2:5.99:49,6,0	1/1:1,3:4:1.06:67,1,0	1/1:10,3:13:20.62:195,21,0	1/1:0,5:5:14.81:102,15,0	1/1:0,4:4:11.78:74,12,0	1/1:5,6:11:20.84:172,21,0	1/1:3,4:7:18.34:143,18,0	1/1:16,0:16:25.96:147,26,0	1/1:0,2:2:5.95:46,6,0	1/1:2,0:2:2.84:14,3,0
chr10	67487990	.	CAGG	C	2979.24	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=1.621;DP=242;FS=1.064;HRun=0;HaplotypeScore=108.5803;InbreedingCoeff=0.4923;MQ=68.96;MQ0=2;MQRankSum=-5.087;QD=15.28;ReadPosRankSum=3.980;VQSLOD=3.0913;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:29:23.66:205,24,0	1/1:8,0:8:2.99:24,3,0	0/0:14,0:9:14.57:0,15,168	0/0:29,1:18:11.81:0,12,274	1/1:13,0:13:11.90:95,12,0	1/1:1,3:4:11.49:91,11,0	1/1:0,9:8:21.49:212,21,0	1/1:0,7:4:12.03:141,12,0	1/1:0,3:2:5.94:43,6,0	1/1:2,9:9:21.49:199,21,0	1/1:3,3:6:9:83,9,0	1/1:0,5:5:15.02:154,15,0	1/1:0,3:3:2.67:34,3,0	1/1:0,3:3:9:85,9,0	1/1:0,5:5:15.01:148,15,0	1/1:1,1:2:6:53,6,0	1/1:18,0:18:5.97:44,6,0	1/1:1,2:3:8.98:79,9,0	1/1:0,2:2:6.01:63,6,0	1/1:1,3:4:5.02:93,5,0	1/1:10,3:13:36.61:294,37,0	1/1:0,5:5:15.01:138,15,0	1/1:0,4:4:11.99:102,12,0	1/1:5,6:11:22.57:217,23,0	1/1:3,4:7:19.84:186,20,0	1/1:16,0:16:29.89:237,30,0	1/1:0,2:2:6.01:61,6,0	1/1:2,0:2:2.98:22,3,0
chr10	67488763	.	T	TACACACACACAC	4807.09	PASS	AB=0.915;AC=33;AF=0.589;AN=56;BaseQRankSum=5.238;DP=699;FS=76.613;HRun=0;HaplotypeScore=311.1588;InbreedingCoeff=0.4804;MQ=55.86;MQ0=38;MQRankSum=-6.125;QD=11.64;ReadPosRankSum=-4.390;VQSLOD=-0.1482;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:62.49:0,62,2128	0/0:16,0:18:18.89:0,19,714	0/0:27,0:14:6.01:0,6,91	0/0:39,0:30:6.02:0,6,69	0/1:12,0:16:6.38:6,0,7	1/1:21,0:14:6.02:125,6,0	1/1:31,0:29:6.83:216,7,0	0/0:25,0:25:24.85:0,25,586	1/1:20,0:15:9.03:268,9,0	0/1:27,7:32:10.59:1266,0,11	1/1:19,0:18:5.09:203,5,0	1/1:18,3:22:5.69:249,6,0	0/0:32,0:31:39.01:0,39,1034	1/1:17,0:21:5.75:209,6,0	1/1:21,3:21:3.01:176,3,0	1/1:10,0:9:6.02:268,6,0	0/0:21,0:22:33.11:0,33,1027	1/1:13,0:12:15.02:328,15,0	1/1:19,0:18:21.06:653,21,0	1/1:10,0:7:6:62,6,0	1/1:40,0:34:8.36:178,8,0	0/1:34,0:33:38.93:39,0,834	0/1:30,0:31:15.66:16,0,1204	0/0:41,0:43:41.37:0,41,1585	1/1:16,0:14:18.40:194,18,0	0/0:26,0:27:30.11:0,30,1321	1/1:10,0:7:9.03:327,9,0	0/1:12,0:14:26.53:27,0,474
chr10	67497593	.	TAC	T	1756.39	PASS	AB=0.958;AC=22;AF=0.393;AN=56;BaseQRankSum=6.462;DP=1097;FS=0.876;HRun=0;HaplotypeScore=342.3244;InbreedingCoeff=0.0959;MQ=40.48;MQ0=33;MQRankSum=-3.749;QD=2.61;ReadPosRankSum=0.562;VQSLOD=1.3267;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:6,22:29:21.06:244,21,0	1/1:16,15:31:28.78:325,29,0	0/0:51,0:11:4.25:0,4,33	0/0:66,1:15:10.63:0,11,76	0/0:24,0:29:16.83:0,17,145	0/1:27,2:28:70.55:71,0,266	0/0:35,0:34:42.10:0,42,594	0/1:32,6:35:27.45:131,0,27	0/0:34,2:35:43.11:0,43,1014	0/1:71,0:68:18.62:19,0,786	0/1:33,0:33:1.82:2,0,359	0/0:37,0:35:70.21:0,70,940	0/1:38,1:37:23.19:23,0,725	0/0:27,0:27:62.98:0,63,878	0/0:47,0:47:29.26:0,29,954	0/0:29,0:29:54.18:0,54,822	1/1:3,20:24:31.64:352,32,0	0/0:18,0:18:14.97:0,15,469	0/1:34,1:30:24.34:24,0,303	0/0:47,0:48:41.63:0,42,610	0/1:82,5:83:99:150,0,1549	0/1:48,2:49:86.36:86,0,636	0/1:33,2:34:4.27:4,0,331	0/1:37,0:36:59.78:60,0,783	0/1:49,2:51:40.92:41,0,395	1/1:38,2:39:6.62:292,7,0	0/1:26,1:27:16.29:16,0,352	1/1:8,6:13:10.51:97,11,0
chr10	67497608	.	A	ATGTG	657.92	PASS	AB=0.869;AC=4;AF=0.071;AN=56;BaseQRankSum=10.524;DP=1058;FS=64.150;HRun=0;HaplotypeScore=340.1650;InbreedingCoeff=-0.0787;MQ=42.42;MQ0=30;MQRankSum=-8.755;QD=4.09;ReadPosRankSum=-1.134;VQSLOD=-0.1896;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:42.13:0,42,697	0/0:25,1:26:18.09:0,18,415	0/0:45,0:13:27.70:0,28,554	0/0:60,0:14:33.11:0,33,656	0/0:17,5:27:29.41:0,29,386	0/0:23,0:24:11.45:0,11,525	0/0:34,0:33:75.26:0,75,1517	0/0:36,0:32:73.88:0,74,1450	0/0:39,0:38:90.78:0,91,1852	0/1:50,8:65:99:355,0,2100	0/0:23,7:33:30.01:0,30,785	0/0:32,0:32:78.63:0,79,1530	0/0:37,0:37:45.98:0,46,1687	0/0:28,0:28:69.71:0,70,1444	0/0:45,0:47:91.39:0,91,1779	0/0:32,0:32:72.68:0,73,1449	0/0:26,0:26:48.16:0,48,730	0/0:22,0:21:60.19:0,60,1180	0/0:29,0:26:46.37:0,46,1203	0/0:26,8:42:36.33:0,36,1277	0/0:96,0:94:99:0,214,4147	0/0:40,6:48:67.89:0,68,1284	0/0:19,3:26:33.74:0,34,670	0/0:40,0:39:78.20:0,78,1498	0/1:46,2:51:92.15:92,0,709	0/1:25,3:30:99:149,0,738	0/0:21,0:25:49.81:0,50,922	0/1:7,5:12:63.40:172,0,63
chr10	67498706	.	G	GCGTA	1130.87	PASS	AB=1.000;AC=8;AF=0.143;AN=56;BaseQRankSum=-1.412;DP=619;FS=2.239;HRun=0;HaplotypeScore=112.3968;InbreedingCoeff=0.0883;MQ=60.98;MQ0=12;MQRankSum=1.144;QD=6.18;ReadPosRankSum=-4.713;VQSLOD=0.7435;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:43,0:43:99:204,0,437	0/1:10,0:10:18.14:144,0,18	0/0:14,0:11:29.86:0,30,259	0/0:14,0:9:4.87:0,5,83	1/1:1,10:11:9.03:241,9,0	0/0:25,0:25:75.18:0,75,1221	0/0:33,0:33:87.05:0,87,1233	0/1:14,0:14:99:106,0,102	0/0:20,0:20:60.16:0,60,1019	0/0:23,0:23:60.09:0,60,852	0/0:15,0:15:45.07:0,45,658	0/0:19,0:19:51.05:0,51,678	0/0:17,0:17:45.09:0,45,711	0/0:23,0:23:69.11:0,69,1016	0/0:22,0:22:62.79:0,63,836	0/0:10,0:10:30.06:0,30,470	0/1:56,0:56:99:283,0,553	0/0:21,0:21:57.03:0,57,750	0/0:15,0:13:17.67:0,18,216	0/0:16,0:16:42.03:0,42,536	0/0:53,0:44:99:0,114,1720	0/0:15,0:15:37.87:0,38,554	0/0:12,0:12:33.03:0,33,426	0/0:35,0:35:99:0,99,1482	0/0:16,0:16:48.11:0,48,740	0/1:29,0:29:99:157,0,385	0/0:17,0:17:45.02:0,45,591	0/1:20,0:20:99:133,0,208
chr10	67499513	.	T	TA	5584.89	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=17.030;DP=609;FS=5.161;HRun=0;HaplotypeScore=69.2718;InbreedingCoeff=0.9985;MQ=83.91;MQ0=0;MQRankSum=-1.730;QD=30.69;ReadPosRankSum=-0.261;VQSLOD=4.4421;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:1,29:30:75.23:903,75,0	1/1:0,9:9:27.08:323,27,0	0/0:24,0:24:69.19:0,69,914	0/0:14,0:14:36.11:0,36,486	1/1:1,30:31:85.40:1021,85,0	0/0:23,0:23:69.18:0,69,926	0/0:8,0:8:24.08:0,24,336	1/1:4,24:28:64.28:809,64,0	0/0:18,0:18:54.18:0,54,755	0/0:28,0:28:84.28:0,84,1169	0/0:27,0:27:81.26:0,81,1117	0/0:20,0:20:60.19:0,60,821	0/0:18,0:18:54.18:0,54,753	0/0:15,0:15:45.15:0,45,628	0/0:21,0:21:60.20:0,60,839	0/0:22,0:22:66.22:0,66,920	1/1:4,28:32:75.92:933,76,0	0/0:25,0:25:72.24:0,72,1001	0/0:8,0:8:21.07:0,21,293	0/0:33,0:33:96.31:0,96,1328	0/0:18,0:18:51.17:0,51,713	0/0:28,0:28:84.25:0,84,1153	0/0:20,0:20:60.19:0,60,823	0/0:9,0:9:27.09:0,27,377	0/0:21,0:21:60.20:0,60,839	1/1:4,31:35:50.98:1025,51,0	0/0:27,0:27:81.27:0,81,1131	1/1:0,17:17:48.15:572,48,0
chr10	67501959	.	T	TGCTGCC	1556.61	PASS	AB=1.000;AC=12;AF=0.240;AN=50;BaseQRankSum=-2.098;DP=376;FS=5.078;HRun=0;HaplotypeScore=81.4122;InbreedingCoeff=0.7486;MQ=67.21;MQ0=1;MQRankSum=-4.751;QD=19.96;ReadPosRankSum=-1.411;VQSLOD=2.1273;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,12:16:5.98:112,6,0	1/1:4,0:3:6.01:101,6,0	0/0:13,0:11:33.03:0,33,484	0/0:16,0:15:35.90:0,36,466	0/1:3,0:3:0:0,0,0	0/0:11,0:11:24.03:0,24,333	0/0:31,0:31:78.12:0,78,1521	1/1:5,9:16:32.72:490,33,0	0/0:13,0:13:14.96:0,15,592	0/0:9,0:9:17.90:0,18,174	./.	0/0:24,0:24:56.49:0,56,1097	0/0:7,0:7:11.86:0,12,178	0/0:23,0:23:56.47:0,56,1030	0/0:5,0:5:15.04:0,15,307	0/0:10,0:10:21.04:0,21,364	1/1:0,22:26:18.06:552,18,0	0/0:25,0:25:69.09:0,69,1266	0/0:10,0:10:26.67:0,27,437	./.	0/0:43,0:42:98.84:0,99,1345	0/0:3,0:3:5.75:0,6,51	./.	0/0:40,0:40:99:0,114,2449	0/0:4,0:4:9:0,9,79	0/1:9,0:9:33.01:162,0,33	0/0:8,0:8:21.04:0,21,404	1/1:4,0:4:12.04:296,12,0
chr10	67503158	.	A	AGTGTGTGT	5092.01	PASS	AB=1.000;AC=46;AF=0.885;AN=52;BaseQRankSum=-2.096;DP=570;FS=6.025;HRun=0;HaplotypeScore=176.8572;InbreedingCoeff=0.2664;MQ=80.53;MQ0=13;MQRankSum=0.894;QD=10.52;ReadPosRankSum=-0.388;VQSLOD=3.4536;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:29:12.02:226,12,0	1/1:5,0:5:5.99:48,6,0	./.	./.	0/1:12,0:12:0:0,0,0	1/1:15,0:15:3.48:46,3,0	1/1:30,0:29:16.62:356,17,0	0/1:18,0:16:0:0,0,0	1/1:18,0:18:2.77:94,3,0	1/1:25,0:24:34.37:510,34,0	0/1:13,0:12:0:0,0,0	1/1:9,7:17:3.01:121,3,0	1/1:12,0:12:6.44:45,6,0	1/1:18,0:17:6.02:140,6,0	1/1:14,0:14:5.53:86,6,0	1/1:11,0:11:15.03:294,15,0	1/1:33,0:33:27.04:438,27,0	1/1:26,0:25:27.08:616,27,0	1/1:15,0:15:6.46:58,6,0	1/1:12,0:12:3.01:73,3,0	1/1:40,0:40:26.94:518,27,0	1/1:20,0:20:8.96:93,9,0	1/1:10,0:10:6.48:91,6,0	1/1:36,0:34:27.06:441,27,0	1/1:16,0:16:15.02:217,15,0	0/1:23,0:23:2.35:228,0,2	1/1:16,0:16:17.98:352,18,0	0/0:10,0:10:0.08:0,0,122
chr10	67503296	.	G	GGGAT	9881.89	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-13.092;DP=572;FS=3.909;HRun=0;HaplotypeScore=89.6107;InbreedingCoeff=0.9992;MQ=83.77;MQ0=0;MQRankSum=-5.246;QD=64.59;ReadPosRankSum=3.909;VQSLOD=6.6445;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,26:29:75.26:2006,75,0	1/1:1,9:10:24.08:603,24,0	0/0:19,0:19:54.18:0,54,952	0/0:25,0:24:66.21:0,66,1100	1/1:2,25:27:66.23:1768,66,0	0/0:19,0:19:54.18:0,54,990	0/0:21,0:21:60.10:0,60,1097	1/1:5,16:19:54.17:1302,54,0	0/0:21,0:21:63.22:0,63,1179	0/0:20,0:20:51.17:0,51,968	0/0:19,0:19:51.16:0,51,925	0/0:25,0:25:66.17:0,66,1182	0/0:14,0:14:42.13:0,42,756	0/0:14,0:14:42.14:0,42,796	0/0:12,0:12:36.07:0,36,576	0/0:9,0:9:27.09:0,27,512	1/1:3,34:38:81.28:2184,81,0	0/0:26,0:26:75.25:0,75,1368	0/0:14,0:14:30.09:0,30,527	0/0:24,0:24:69.21:0,69,1222	0/0:31,0:31:67.22:0,67,1456	0/0:14,0:14:33.09:0,33,564	0/0:19,0:19:51.13:0,51,849	0/0:36,0:36:93.29:0,93,1693	0/0:15,0:15:45.15:0,45,843	1/1:1,12:13:36.12:970,36,0	0/0:22,0:22:60.17:0,60,1059	1/1:0,15:15:39.13:1050,39,0
chr10	67503801	.	C	CT	2815.48	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=13.944;DP=548;FS=0.405;HRun=9;HaplotypeScore=68.9819;InbreedingCoeff=0.9031;MQ=73.64;MQ0=3;MQRankSum=-2.901;QD=18.77;ReadPosRankSum=-1.503;VQSLOD=3.3422;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,23:26:63.05:654,63,0	1/1:2,5:8:17.88:180,18,0	0/0:24,0:17:14.76:0,15,192	0/0:18,0:13:3.01:0,3,90	1/1:8,14:22:41.94:421,42,0	0/0:28,0:28:77.94:0,78,667	0/0:22,0:22:56.95:0,57,490	1/1:11,17:25:57.05:588,57,0	0/0:17,0:17:41.94:0,42,356	0/0:22,0:22:56.98:0,57,493	0/0:26,0:26:68.96:0,69,595	0/0:23,0:23:50.95:0,51,435	0/0:10,0:10:29.97:0,30,256	0/0:17,0:17:41.98:0,42,364	0/0:21,0:21:62.99:0,63,547	0/0:18,0:18:53.99:0,54,469	1/1:6,12:19:41.87:420,42,0	0/0:15,0:15:28.84:0,29,319	0/0:29,0:29:77.95:0,78,670	0/0:18,0:18:38.97:0,39,336	0/0:17,0:17:47.97:0,48,413	0/1:14,0:14:3.17:3,0,204	0/0:13,0:13:38.98:0,39,335	0/0:25,0:24:62.96:0,63,542	0/0:17,0:17:44.98:0,45,391	1/1:6,17:23:25.12:503,25,0	0/0:18,0:18:53.99:0,54,468	1/1:3,6:9:25.80:244,26,0
chr10	67504266	.	AAAGAAG	A	3441.71	PASS	AB=0.515;AC=13;AF=0.232;AN=56;BaseQRankSum=9.961;DP=422;FS=11.803;HRun=0;HaplotypeScore=86.8476;InbreedingCoeff=0.8700;MQ=59.41;MQ0=4;MQRankSum=-6.319;QD=34.42;ReadPosRankSum=0.492;VQSLOD=2.3586;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,17:25:30.10:594,30,0	1/1:1,8:9:18.02:341,18,0	0/0:27,0:15:27.06:0,27,722	0/0:23,0:18:33.11:0,33,941	1/1:0,8:8:21.03:357,21,0	0/0:26,0:25:60.21:0,60,1928	0/0:17,0:17:39.12:0,39,1109	1/1:5,13:18:39.08:561,39,0	0/0:11,0:11:27.09:0,27,813	0/0:12,0:12:30.10:0,30,981	0/0:12,0:13:33.05:0,33,995	0/0:8,0:8:18.06:0,18,531	0/0:7,0:7:15.05:0,15,435	0/0:14,0:14:30.10:0,30,896	0/0:11,0:11:30.10:0,30,962	0/0:11,0:11:30.09:0,30,900	1/1:6,14:20:30.10:594,30,0	0/0:22,0:22:57.20:0,57,1698	0/0:17,0:17:48.16:0,48,1497	0/0:16,0:16:45.07:0,45,1211	0/0:12,0:11:30.07:0,30,796	0/0:13,0:13:33.09:0,33,990	0/0:14,0:14:39.13:0,39,1192	0/0:22,0:22:50.84:0,51,1352	0/0:8,0:8:24.08:0,24,781	0/1:1,16:17:51.90:866,0,52	0/0:18,0:18:45.15:0,45,1240	1/1:1,2:3:6.02:129,6,0
chr10	67504368	.	T	TGAAAGAAAGAAA	4570.99	PASS	AB=0.688;AC=35;AF=0.729;AN=48;BaseQRankSum=-1.916;DP=332;FS=0.915;HRun=0;HaplotypeScore=105.6035;InbreedingCoeff=0.5346;MQ=63.13;MQ0=2;MQRankSum=-4.399;QD=19.96;ReadPosRankSum=-1.677;VQSLOD=3.5404;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:19:3.01:100,3,0	1/1:6,0:6:9.03:166,9,0	./.	./.	1/1:19,0:19:9.03:162,9,0	1/1:14,4:22:21.06:829,21,0	1/1:12,0:12:6.02:122,6,0	./.	0/0:6,0:10:1.55:0,2,4	1/1:10,2:15:15.05:686,15,0	1/1:9,1:11:6.02:264,6,0	0/1:6,0:9:0.13:40,0,0	0/0:11,0:11:12.04:0,12,369	0/0:8,0:10:1.55:0,2,4	./.	1/1:5,2:7:9.03:518,9,0	1/1:12,0:12:3.01:41,3,0	1/1:14,0:14:4.39:221,4,0	1/1:13,2:14:9.03:399,9,0	1/1:8,0:6:3.01:39,3,0	1/1:9,0:8:6:59,6,0	0/0:8,0:8:15.05:0,15,399	0/0:6,0:6:6.02:0,6,205	0/0:24,0:24:42.14:0,42,1326	1/1:12,0:16:12.04:301,12,0	1/1:8,0:8:6.02:250,6,0	1/1:11,4:18:6.02:331,6,0	1/1:4,0:3:3.01:44,3,0
chr10	67504651	.	A	AGAGG	794.43	PASS	AB=1.000;AC=14;AF=0.250;AN=56;BaseQRankSum=8.288;DP=447;FS=0.982;HRun=0;HaplotypeScore=102.3576;InbreedingCoeff=0.2369;MQ=47.01;MQ0=25;MQRankSum=-2.629;QD=4.29;ReadPosRankSum=-0.494;VQSLOD=2.1286;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:32,0:30:3.85:22,4,0	1/1:6,0:6:8.96:80,9,0	0/0:13,0:5:14.69:0,15,123	0/0:29,0:10:11.69:0,12,77	0/1:26,0:25:8.47:55,0,8	0/0:15,0:12:20.92:0,21,164	0/0:19,0:18:21.36:0,21,158	0/1:21,0:17:24.90:171,0,25	0/1:13,0:11:18.28:18,0,97	0/0:20,0:19:36.12:0,36,308	0/0:12,0:10:14.15:0,14,89	1/1:5,0:5:1.67:5,2,0	0/0:12,0:11:1.81:0,2,124	0/0:12,0:11:17.69:0,18,139	0/0:8,0:8:14.90:0,15,117	0/0:11,0:10:14.30:0,14,117	0/0:9,9:17:5.04:0,5,40	0/0:16,0:15:30.28:0,30,225	0/0:14,0:14:1.26:0,1,125	0/0:17,0:17:20.86:0,21,235	0/1:21,0:21:56.67:57,0,103	0/0:13,0:11:20.79:0,21,173	0/0:9,0:9:12.70:0,13,93	0/0:11,0:9:23.94:0,24,192	0/1:19,0:18:9.61:10,0,212	0/1:22,0:21:47.76:282,0,48	0/0:13,0:11:1.70:0,2,145	1/1:20,0:17:28.79:251,29,0
chr10	67504654	.	G	GGC	1273.65	PASS	AB=0.972;AC=11;AF=0.196;AN=56;BaseQRankSum=2.540;DP=433;FS=0.000;HRun=0;HaplotypeScore=60.7184;InbreedingCoeff=0.5127;MQ=47.15;MQ0=26;MQRankSum=-2.214;QD=9.37;ReadPosRankSum=-0.548;VQSLOD=2.8572;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,22:30:2.95:20,3,0	1/1:0,4:4:3.01:56,3,0	0/0:13,0:5:14.84:0,15,200	0/0:27,0:8:12.02:0,12,138	1/1:11,12:22:7.17:75,7,0	0/0:14,0:11:20.99:0,21,311	0/0:18,0:17:21.07:0,21,298	0/1:20,0:17:82.68:364,0,83	0/0:14,0:12:21.43:0,21,253	0/0:20,0:19:49.39:0,49,687	0/0:12,0:10:12.04:0,12,168	0/0:5,0:5:2.88:0,3,15	0/0:12,0:11:16.81:0,17,268	0/0:12,0:11:17.85:0,18,264	0/0:8,0:8:15.05:0,15,224	0/0:11,0:10:15.02:0,15,219	0/1:14,0:13:0.53:1,0,74	0/0:16,0:15:33.56:0,34,433	0/0:13,0:13:37.95:0,38,394	0/0:17,0:17:36.83:0,37,499	0/0:20,0:20:29.40:0,29,322	0/0:13,0:11:21.07:0,21,323	0/0:9,0:9:11.63:0,12,177	0/0:12,0:10:24.03:0,24,364	0/0:19,0:18:33.07:0,33,462	0/1:20,2:21:99:446,0,237	0/0:12,0:10:19.97:0,20,337	1/1:20,0:16:11.83:455,12,0
chr10	67505281	.	T	TA	3488.99	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-11.061;DP=432;FS=5.614;HRun=7;HaplotypeScore=39.2382;InbreedingCoeff=0.9146;MQ=60.90;MQ0=2;MQRankSum=0.322;QD=24.57;ReadPosRankSum=-0.830;VQSLOD=3.1516;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,32:33:51.16:610,51,0	1/1:1,8:9:24.07:287,24,0	0/0:5,0:2:1.25:0,1,3	0/0:5,0:3:3:0,3,29	1/1:4,12:16:33.10:395,33,0	0/0:17,0:17:42.06:0,42,403	0/0:14,0:14:32.97:0,33,302	1/1:3,24:26:71.79:688,72,0	0/0:12,0:12:30:0,30,276	0/0:23,0:23:56.87:0,57,520	0/0:18,0:18:41.98:0,42,389	0/0:9,0:9:24:0,24,223	0/0:12,0:12:30.05:0,30,289	0/0:12,0:12:33.03:0,33,312	0/0:20,0:20:39.02:0,39,360	0/0:14,0:14:36.03:0,36,347	1/1:1,24:25:60.18:718,60,0	0/0:21,0:20:48.06:0,48,456	0/0:17,0:18:44.07:0,44,403	0/0:27,0:27:68.91:0,69,636	0/0:4,0:4:8.95:0,9,75	0/0:7,0:7:15.02:0,15,145	0/0:16,0:16:39.06:0,39,376	0/0:3,0:3:9:0,9,82	0/0:18,0:18:39.06:0,39,376	1/1:7,14:21:19.67:446,20,0	0/0:14,0:14:35.98:0,36,335	1/1:1,10:11:30.07:345,30,0
chr10	67506072	.	TAC	T	143.34	PASS	AB=0.867;AC=7;AF=0.125;AN=56;BaseQRankSum=2.353;DP=377;FS=0.000;HRun=0;HaplotypeScore=59.3052;InbreedingCoeff=-0.2244;MQ=61.53;MQ0=5;MQRankSum=3.628;QD=1.65;ReadPosRankSum=1.956;VQSLOD=1.1735;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:5.73:0,6,61	0/0:9,0:9:2.69:0,3,36	0/0:26,0:14:6.02:0,6,91	0/0:32,0:17:12.04:0,12,161	0/0:10,0:8:3:0,3,26	0/0:13,1:13:1.96:0,2,439	0/1:19,1:21:28.44:28,0,431	0/0:13,0:13:22.97:0,23,144	0/1:8,1:9:9.99:10,0,276	0/0:11,0:11:0.06:0,0,321	0/0:4,0:4:9:0,9,113	0/0:12,0:12:29.75:0,30,403	0/0:7,0:8:0.90:0,1,158	0/0:9,0:9:24.08:0,24,365	0/1:14,1:15:0.95:1,0,428	0/0:12,0:11:30.10:0,30,461	0/0:6,0:4:2.94:0,3,18	0/1:7,3:10:78.04:78,0,184	0/0:13,0:11:27.06:0,27,390	0/0:15,0:16:0.45:0,0,404	0/0:18,3:20:11.06:0,11,566	0/1:12,1:13:44.56:45,0,278	0/0:9,0:9:18.04:0,18,254	0/1:9,4:13:78.27:78,0,206	0/1:4,1:6:19.01:19,0,149	0/0:16,0:15:36.81:0,37,267	0/0:13,0:13:3.15:0,3,215	0/0:13,0:13:11.99:0,12,124
chr10	67506569	.	ATT	A	3135.04	PASS	AC=12;AF=0.222;AN=54;BaseQRankSum=7.959;DP=338;FS=44.445;HRun=8;HaplotypeScore=50.3928;InbreedingCoeff=0.9456;MQ=77.00;MQ0=0;MQRankSum=-1.576;QD=32.66;ReadPosRankSum=3.496;VQSLOD=1.0963;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,10:11:30.09:366,30,0	1/1:0,3:3:9.03:110,9,0	0/0:10,0:10:26.25:0,26,359	0/0:11,0:11:16.27:0,16,271	0/0:4,0:34:71.78:0,72,251	0/0:17,0:17:48.16:0,48,812	0/0:5,0:5:15.05:0,15,254	1/1:1,18:19:54.15:645,54,0	0/0:12,0:12:33.11:0,33,554	0/0:10,0:10:30.10:0,30,486	0/0:17,0:17:45.15:0,45,761	0/0:4,0:4:9.03:0,9,152	0/0:9,0:9:27.09:0,27,456	./.	0/0:6,0:6:18.06:0,18,305	0/0:4,0:4:12.04:0,12,203	1/1:1,15:16:45.14:549,45,0	0/0:16,0:16:42.13:0,42,684	0/0:25,0:25:63.21:0,63,1036	0/0:12,0:12:36.12:0,36,609	0/0:7,0:7:21.07:0,21,355	0/0:5,0:5:15.05:0,15,254	0/0:7,0:7:21.07:0,21,355	0/0:3,0:3:9.03:0,9,152	0/0:9,0:9:27.09:0,27,456	1/1:0,10:10:30.09:366,30,0	0/0:18,0:18:51.15:0,51,832	1/1:2,35:37:99:1281,105,0
chr10	67506664	.	TC	T	1529.61	PASS	AB=0.859;AC=22;AF=0.393;AN=56;BaseQRankSum=7.587;DP=328;FS=7.506;HRun=12;HaplotypeScore=51.9633;InbreedingCoeff=0.2346;MQ=78.01;MQ0=1;MQRankSum=-1.483;QD=7.46;ReadPosRankSum=4.055;VQSLOD=1.5768;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,12:13:35.86:279,36,0	1/1:1,5:6:14.94:116,15,0	0/1:11,0:10:26.48:26,0,37	0/1:17,0:14:5:5,0,70	1/1:4,0:19:24.35:71,24,0	0/0:14,0:15:0.46:0,0,127	0/0:9,0:10:17.06:0,17,175	1/1:11,7:18:20.87:161,21,0	0/1:13,3:16:2.23:2,0,148	0/0:15,0:15:0.46:0,0,131	0/1:11,1:12:15.23:15,0,93	0/1:3,1:4:14.31:14,0,32	0/0:5,0:5:6:0,6,54	0/1:3,3:6:17.22:17,0,24	0/0:7,0:7:8.97:0,9,76	0/0:6,0:6:11.05:0,11,92	1/1:5,15:20:50.77:390,51,0	0/1:8,3:12:49.68:50,0,92	0/0:11,0:11:2.60:0,3,82	0/0:8,0:8:2.13:0,2,29	0/0:14,0:13:11.96:0,12,98	0/0:9,1:10:5.57:0,6,61	0/0:7,2:9:5.80:0,6,43	0/0:4,0:4:3.01:0,3,31	0/0:9,0:9:3.26:0,3,86	1/1:6,8:15:30.10:211,30,0	0/1:14,2:15:16.84:17,0,170	1/1:5,14:19:32.10:330,32,0
chr10	67506927	.	T	TG	7451.57	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-15.737;DP=630;FS=15.862;HRun=0;HaplotypeScore=62.0871;InbreedingCoeff=0.9962;MQ=81.77;MQ0=0;MQRankSum=-4.264;QD=44.09;ReadPosRankSum=-0.068;VQSLOD=3.2780;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,33:32:84.29:1343,84,0	1/1:0,6:6:15.05:240,15,0	0/0:15,0:15:45.15:0,45,615	0/0:26,0:27:30.67:0,31,824	1/1:0,31:31:84.29:1342,84,0	0/0:23,0:23:69.21:0,69,947	0/0:25,0:25:75.25:0,75,1048	1/1:1,35:36:99:1654,105,0	0/0:24,0:24:72.24:0,72,1007	0/0:30,0:30:87.29:0,87,1217	0/0:21,0:21:60.18:0,60,821	0/0:19,0:19:54.18:0,54,755	0/0:27,0:27:81.27:0,81,1129	0/0:26,0:26:75.25:0,75,1048	0/0:12,0:12:36.12:0,36,502	0/0:34,0:34:96.32:0,96,1341	1/1:0,8:8:24.08:383,24,0	0/0:8,0:8:24.08:0,24,336	0/0:21,0:21:58.97:0,59,753	0/0:28,0:28:81.27:0,81,1128	0/0:37,0:37:99:0,108,1470	0/0:16,0:16:48.15:0,48,655	0/0:14,0:13:36.12:0,36,503	0/0:11,0:11:33.11:0,33,461	0/0:19,0:19:57.17:0,57,778	1/1:0,36:36:99:1721,108,0	0/0:24,0:24:69.23:0,69,964	1/1:0,19:19:48.16:767,48,0
chr10	67507387	.	A	AAG	852.05	PASS	AB=0.770;AC=10;AF=0.179;AN=56;BaseQRankSum=2.323;DP=556;FS=0.511;HRun=0;HaplotypeScore=90.5403;InbreedingCoeff=0.2303;MQ=57.92;MQ0=12;MQRankSum=1.289;QD=4.53;ReadPosRankSum=1.449;VQSLOD=2.5293;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:17,13:36:77.40:223,0,77	1/1:2,1:11:20.27:177,20,0	0/0:35,0:17:19.31:0,19,157	0/1:34,0:10:9.86:10,0,49	0/1:24,0:25:33.24:124,0,33	0/0:15,0:15:41.82:0,42,386	0/0:15,0:15:41.75:0,42,374	0/1:15,1:29:99:220,0,143	0/0:13,0:13:31.38:0,31,286	0/0:18,0:17:33.09:0,33,269	0/0:20,0:20:54.59:0,55,501	0/0:12,0:12:36.03:0,36,353	0/0:22,0:22:41.42:0,41,423	0/0:10,0:10:23.17:0,23,224	0/0:8,0:8:20.80:0,21,160	0/0:9,0:9:16.31:0,16,206	0/1:6,1:17:40.14:46,0,40	0/0:23,0:23:54.43:0,54,443	0/0:28,0:25:73.08:0,73,629	0/0:29,0:29:56.90:0,57,553	0/0:5,0:5:12.79:0,13,106	0/0:26,0:25:67.04:0,67,563	0/0:17,0:16:44.84:0,45,376	0/0:22,0:22:33.47:0,33,343	0/0:19,0:19:47.27:0,47,417	0/1:17,1:26:99:148,0,280	0/0:21,0:21:51.01:0,51,491	1/1:2,0:7:5.89:54,6,0
chr10	67510670	.	A	AAGGG	7191.55	PASS	AB=0.560;AC=13;AF=0.232;AN=56;BaseQRankSum=-7.389;DP=605;FS=12.854;HRun=0;HaplotypeScore=95.3254;InbreedingCoeff=0.8882;MQ=54.54;MQ0=12;MQRankSum=-2.810;QD=48.92;ReadPosRankSum=-0.216;VQSLOD=4.9475;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:17,7:23:34.74:900,35,0	1/1:2,6:8:24.08:565,24,0	0/0:41,0:10:9.19:0,9,316	0/0:47,0:11:25.19:0,25,293	1/1:8,9:16:39.11:909,39,0	0/0:17,0:17:51.15:0,51,877	0/0:18,0:17:48.11:0,48,802	1/1:3,25:32:76.45:1315,76,0	0/0:29,0:29:87.22:0,87,1443	0/0:24,0:24:69.20:0,69,1187	0/0:25,0:25:69.12:0,69,1107	0/0:15,0:15:45.14:0,45,803	0/0:22,0:22:57.08:0,57,883	0/0:8,0:8:21.07:0,21,398	0/0:20,0:20:51.17:0,51,922	0/0:13,0:13:33.08:0,33,527	1/1:12,7:20:38.39:1068,38,0	0/0:23,0:23:69.18:0,69,1170	0/0:20,0:20:57.12:0,57,852	0/0:14,0:13:36.07:0,36,579	0/0:19,0:19:51.05:0,51,784	0/0:24,0:24:69.16:0,69,1214	0/0:16,0:16:39.10:0,39,638	0/0:29,0:32:75.82:0,76,1225	0/0:13,0:13:33.10:0,33,586	0/1:6,22:28:29.34:1310,0,29	0/0:18,0:18:54.17:0,54,990	1/1:2,16:18:42.14:1124,42,0
chr10	67510694	.	A	AGAAG	1843.10	PASS	AC=18;AF=0.346;AN=52;BaseQRankSum=1.524;DP=599;FS=4.081;HRun=0;HaplotypeScore=111.1339;InbreedingCoeff=0.8939;MQ=54.83;MQ0=15;MQRankSum=-1.821;QD=10.24;ReadPosRankSum=-2.270;VQSLOD=2.1548;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,11:24:16.30:355,16,0	1/1:5,1:6:8.99:150,9,0	./.	./.	1/1:9,4:13:11.89:209,12,0	0/0:20,0:20:36.11:0,36,534	0/0:19,0:18:21.04:0,21,300	1/1:33,0:31:20.91:207,21,0	0/0:26,0:26:33.09:0,33,485	0/0:21,0:21:18.06:0,18,278	0/0:22,0:22:24.08:0,24,371	0/0:20,0:20:27.09:0,27,417	0/0:19,0:19:36.09:0,36,528	0/0:9,0:9:3.01:0,3,46	1/1:9,7:18:9.02:211,9,0	0/0:13,0:13:21.07:0,21,325	1/1:14,9:24:9.14:297,9,0	0/0:26,0:26:39.13:0,39,603	1/1:15,7:22:24.06:510,24,0	0/0:16,0:15:30.08:0,30,423	0/0:27,0:27:49.47:0,49,757	0/0:21,0:21:18.06:0,18,278	0/0:19,0:19:22.05:0,22,386	0/0:29,0:29:42.06:0,42,649	0/0:10,0:10:15.05:0,15,232	1/1:21,0:20:12.83:73,13,0	0/0:23,0:22:30.10:0,30,461	1/1:16,0:16:2.99:24,3,0
chr10	67510946	.	C	CG	2101.25	PASS	AC=14;AF=0.269;AN=52;BaseQRankSum=6.465;DP=357;FS=13.123;HRun=1;HaplotypeScore=61.1538;InbreedingCoeff=0.9610;MQ=42.54;MQ0=14;MQRankSum=-3.865;QD=21.01;ReadPosRankSum=0.326;VQSLOD=2.3713;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,14:17:17.73:232,18,0	1/1:1,6:7:9.03:133,9,0	./.	./.	1/1:8,10:17:26.70:277,27,0	0/0:10,0:9:21.03:0,21,251	0/0:19,0:18:42:0,42,481	1/1:5,10:12:30.07:421,30,0	0/0:6,0:6:8.99:0,9,98	0/0:16,0:14:33:0,33,351	0/0:13,0:12:33.06:0,33,385	0/0:11,0:11:27.06:0,27,309	0/0:7,0:7:18.04:0,18,208	0/0:11,0:11:16.49:0,16,305	0/0:10,0:10:24.06:0,24,285	0/0:8,0:7:15.05:0,15,194	1/1:5,7:9:21.03:286,21,0	0/0:16,0:16:42.10:0,42,521	0/0:17,0:16:36.12:0,36,457	0/0:16,0:16:30.05:0,30,368	0/0:6,0:6:12.02:0,12,138	0/0:11,0:10:24.01:0,24,257	0/0:20,0:20:41.83:0,42,417	0/0:21,0:21:39.04:0,39,460	0/0:13,0:13:27.05:0,27,330	1/1:6,8:12:33.09:429,33,0	0/0:15,0:15:39.11:0,39,487	1/1:3,13:14:36.01:514,36,0
chr10	67510954	.	AGACC	A	515.12	PASS	AB=0.924;AC=11;AF=0.196;AN=56;BaseQRankSum=7.410;DP=435;FS=37.468;HRun=0;HaplotypeScore=92.0889;InbreedingCoeff=0.0140;MQ=41.29;MQ0=15;MQRankSum=-5.186;QD=3.07;ReadPosRankSum=-2.361;VQSLOD=-0.0665;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:17,0:16:39.69:127,0,40	0/0:7,0:8:0.86:0,1,24	0/1:7,0:2:1.83:2,0,5	0/0:8,0:2:0.21:0,0,1	0/1:17,2:18:16.09:16,0,50	0/0:15,0:14:23.56:0,24,546	0/0:21,0:21:21.94:0,22,939	0/1:18,2:19:57.80:88,0,58	0/0:10,0:10:15.67:0,16,237	0/0:17,4:19:22.51:0,23,615	0/0:16,0:16:14.17:0,14,514	0/0:9,0:9:27.07:0,27,473	0/0:9,0:9:16.11:0,16,309	0/1:16,1:17:38.66:39,0,623	0/0:11,0:11:26.88:0,27,429	0/0:13,0:12:23.58:0,24,388	0/1:17,0:13:3.86:85,0,4	0/0:21,0:20:55.18:0,55,968	0/1:21,3:22:78.58:79,0,741	0/0:19,0:19:51.15:0,51,856	0/1:10,0:10:14.32:14,0,347	0/0:9,0:9:18.93:0,19,359	0/0:13,0:13:15.95:0,16,457	0/0:24,0:24:36.28:0,36,608	0/0:16,0:16:31.76:0,32,448	0/1:14,2:15:27.04:130,0,27	0/0:21,0:20:46.55:0,47,855	1/1:18,0:16:2.38:74,2,0
chr10	67510957	.	CCA	C	742.73	PASS	AB=0.964;AC=19;AF=0.339;AN=56;BaseQRankSum=8.701;DP=446;FS=16.800;HRun=0;HaplotypeScore=80.1897;InbreedingCoeff=0.6567;MQ=45.82;MQ0=17;MQRankSum=-4.242;QD=3.85;ReadPosRankSum=-0.285;VQSLOD=0.8420;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:15,1:15:20.42:116,20,0	1/1:8,1:9:11.97:82,12,0	1/1:15,0:5:6.48:26,6,0	0/0:10,0:2:0.47:0,0,1	0/1:14,2:17:0.22:97,0,0	0/0:17,0:16:33.90:0,34,379	0/0:24,0:24:53.80:0,54,519	1/1:18,0:16:8.97:148,9,0	0/1:11,0:11:8.77:9,0,104	0/0:21,0:19:34.40:0,34,332	0/1:17,0:16:4.62:5,0,190	0/0:10,0:10:28.45:0,28,231	0/0:8,0:8:10.66:0,11,128	0/0:17,0:17:22.62:0,23,332	0/0:10,0:10:15.29:0,15,143	0/0:13,0:12:19.07:0,19,142	1/1:14,2:12:14.13:91,14,0	0/0:21,0:20:57.21:0,57,511	0/1:27,0:25:3.03:3,0,355	0/0:18,0:18:47.88:0,48,472	0/1:11,0:11:1.57:2,0,218	0/0:11,0:11:16.40:0,16,185	0/0:13,0:13:26.05:0,26,219	0/0:25,0:25:18.78:0,19,240	0/0:15,0:15:25.05:0,25,183	1/1:16,1:16:24.78:156,25,0	0/0:20,0:19:42.76:0,43,389	1/1:12,6:16:16.01:195,16,0
chr10	67510973	.	A	AG	498.12	PASS	AB=0.976;AC=8;AF=0.143;AN=56;BaseQRankSum=10.391;DP=482;FS=9.858;HRun=0;HaplotypeScore=79.2307;InbreedingCoeff=0.0867;MQ=49.70;MQ0=13;MQRankSum=-3.376;QD=4.22;ReadPosRankSum=4.907;VQSLOD=2.3689;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:20:25.89:159,0,26	0/1:8,0:9:19.23:19,0,70	0/0:27,0:8:1.60:0,2,78	0/0:24,0:7:8.44:0,8,54	0/1:18,0:17:44.58:63,0,45	0/0:21,0:21:53.04:0,53,466	0/0:23,0:23:58.97:0,59,491	0/1:21,1:22:87.44:87,0,109	0/0:9,0:9:23.96:0,24,215	0/0:23,0:23:47.45:0,47,419	0/0:17,0:17:45.10:0,45,321	0/0:10,0:10:28.52:0,29,210	0/0:9,0:9:24.06:0,24,180	0/0:16,0:16:41.02:0,41,319	0/0:11,0:11:32.65:0,33,246	0/0:12,0:11:20.90:0,21,177	0/1:17,0:14:13.91:109,0,14	0/0:21,0:20:56.59:0,57,443	0/0:23,0:22:62.27:0,62,486	0/0:18,0:18:45.55:0,46,348	0/0:15,0:15:41.07:0,41,331	0/0:14,0:14:38.31:0,38,348	0/0:12,0:12:31.11:0,31,249	0/0:24,0:24:36.15:0,36,241	0/0:15,0:15:29.24:0,29,233	0/1:19,0:18:31.07:156,0,31	0/0:20,0:19:53.03:0,53,401	1/1:6,3:8:10.34:42,10,0
chr10	67510977	.	A	AG	915	PASS	AB=0.928;AC=13;AF=0.232;AN=56;BaseQRankSum=10.483;DP=486;FS=3.912;HRun=0;HaplotypeScore=79.9804;InbreedingCoeff=0.6327;MQ=51.63;MQ0=12;MQRankSum=-5.859;QD=6.27;ReadPosRankSum=3.632;VQSLOD=3.2867;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:20,4:21:11.42:226,11,0	0/1:9,0:10:19.78:35,0,20	0/1:28,0:9:2.74:3,0,58	0/0:24,0:7:11.90:0,12,91	1/1:13,4:16:1.57:120,2,0	0/0:21,0:21:52.99:0,53,452	0/0:24,0:24:47.36:0,47,467	0/1:18,2:21:33.18:160,0,33	0/0:9,0:9:23.88:0,24,199	0/0:22,0:22:45.64:0,46,378	0/0:17,0:17:39.03:0,39,267	0/0:11,0:11:21.15:0,21,202	0/0:10,0:10:23.74:0,24,174	0/0:17,0:17:47.11:0,47,352	0/0:11,0:11:26.60:0,27,194	0/0:11,0:11:17.93:0,18,152	1/1:16,0:14:6.43:145,6,0	0/0:19,0:19:28.48:0,28,324	0/0:22,0:21:51.07:0,51,383	0/0:19,0:19:51.49:0,51,389	0/0:15,0:15:39.58:0,40,304	0/0:16,0:16:41.35:0,41,352	0/0:11,0:11:25.07:0,25,196	0/0:25,0:25:25.92:0,26,174	0/0:15,0:15:23.19:0,23,181	1/1:14,1:17:29.26:289,29,0	0/0:21,0:20:55.13:0,55,394	1/1:7,1:9:11.95:102,12,0
chr10	67511218	.	C	CG	696.21	PASS	AC=12;AF=0.231;AN=52;BaseQRankSum=8.968;DP=392;FS=15.924;HRun=1;HaplotypeScore=67.0715;InbreedingCoeff=0.9269;MQ=44.72;MQ0=15;MQRankSum=-7.761;QD=8.81;ReadPosRankSum=0.442;VQSLOD=-0.3969;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,16:21:22.68:193,23,0	1/1:4,0:4:11.38:68,11,0	./.	0/0:5,0:3:2.82:0,3,36	./.	0/0:15,0:14:30.08:0,30,362	0/0:26,0:22:29.88:0,30,326	1/1:17,1:16:41.37:285,41,0	0/0:14,0:14:32.95:0,33,411	0/0:23,0:21:51.06:0,51,595	0/0:17,0:16:38.93:0,39,415	0/0:21,0:20:44.98:0,45,485	0/0:7,0:7:21.02:0,21,240	0/0:13,0:13:30.04:0,30,342	0/0:11,0:11:18.05:0,18,221	0/0:11,0:11:23.99:0,24,258	1/1:15,1:16:8.52:92,9,0	0/0:19,0:18:36.03:0,36,425	0/0:18,0:18:47.78:0,48,550	0/0:12,0:12:27.03:0,27,314	0/0:14,0:14:38.98:0,39,413	0/0:9,0:8:15.05:0,15,193	0/0:15,0:14:17.99:0,18,188	0/0:27,0:26:57.09:0,57,697	0/0:11,0:11:18:0,18,177	1/1:9,0:9:13.94:100,14,0	0/0:17,0:16:33.02:0,33,383	1/1:9,0:7:20.69:134,21,0
chr10	67511227	.	GAAAAAAGAAAA	G	485.41	PASS	AB=1.000;AC=11;AF=0.204;AN=54;BaseQRankSum=6.237;DP=427;FS=5.283;HRun=0;HaplotypeScore=126.4016;InbreedingCoeff=0.7847;MQ=44.61;MQ0=17;MQRankSum=-4.216;QD=7.47;ReadPosRankSum=1.520;VQSLOD=1.8594;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:17,2:20:20.82:250,21,0	1/1:3,1:4:3.01:82,3,0	0/0:11,0:1:2.50:0,2,9	0/0:8,0:3:5.37:0,5,111	./.	0/0:18,0:17:42.10:0,42,1528	0/0:32,0:29:44:0,44,1306	1/1:13,0:12:5.34:28,5,0	0/0:16,0:16:37.28:0,37,1476	0/0:22,0:20:57.16:0,57,2102	0/0:18,0:17:39.05:0,39,982	0/0:17,0:16:30.44:0,30,932	0/0:6,0:6:15.01:0,15,578	0/0:12,0:12:14.97:0,15,375	0/0:15,0:15:36.08:0,36,1198	0/0:11,0:11:27.06:0,27,1249	1/1:9,2:11:8.13:107,8,0	0/0:22,0:21:42.08:0,42,1394	0/0:23,0:23:59.78:0,60,1775	0/0:14,0:14:32.84:0,33,972	0/0:14,0:14:23.93:0,24,621	0/0:13,0:13:24.03:0,24,749	0/0:17,0:16:42.13:0,42,1443	0/0:34,0:33:55.02:0,55,2192	0/0:10,0:10:27.08:0,27,896	1/1:5,2:6:6.02:164,6,0	0/0:24,0:22:44.87:0,45,1564	0/1:9,0:7:0:0,0,0
chr10	67511801	.	C	CA	1632.65	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=8.824;DP=324;FS=12.884;HRun=0;HaplotypeScore=48.8182;InbreedingCoeff=0.8691;MQ=41.12;MQ0=34;MQRankSum=-7.202;QD=18.34;ReadPosRankSum=3.496;VQSLOD=4.8803;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,14:14:39.13:611,39,0	1/1:0,6:6:18.06:232,18,0	1/1:25,0:1:1.82:5,2,0	0/0:24,0:1:0:0,0,0	1/1:1,8:7:11.56:143,12,0	0/0:12,0:11:27.05:0,27,352	0/0:14,0:14:27.09:0,27,357	1/1:7,4:4:6.02:96,6,0	0/0:5,0:5:12.02:0,12,150	0/0:15,0:14:36.12:0,36,496	0/0:13,0:13:27.09:0,27,374	0/0:11,0:11:18.06:0,18,240	0/0:11,0:11:21.04:0,21,291	0/0:14,0:14:39.09:0,39,518	0/0:12,0:11:18.04:0,18,228	0/0:8,0:8:12.04:0,12,166	1/1:4,7:7:18.06:264,18,0	0/0:15,0:12:21.03:0,21,273	0/0:15,0:12:33.11:0,33,449	0/0:14,0:13:29.99:0,30,441	0/0:9,0:8:18.04:0,18,231	0/0:11,0:9:21.07:0,21,289	0/0:4,0:4:8.96:0,9,125	0/0:8,0:8:11.71:0,12,164	0/0:7,0:7:9.03:0,9,126	1/1:0,6:6:18.06:280,18,0	0/0:13,0:13:33.08:0,33,434	1/1:2,4:4:12.04:190,12,0
chr10	67511846	.	A	AGTTT	472.88	PASS	AB=0.600;AC=5;AF=0.104;AN=48;BaseQRankSum=2.834;DP=301;FS=11.831;HRun=0;HaplotypeScore=69.8335;InbreedingCoeff=0.5820;MQ=72.90;MQ0=16;MQRankSum=-4.335;QD=42.99;ReadPosRankSum=2.514;VQSLOD=3.5340;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,2:2:6.02:145,6,0	./.	0/0:37,0:13:36.08:0,36,674	0/0:31,0:9:15.28:0,15,178	./.	0/0:15,0:15:39.13:0,39,814	0/0:12,0:11:24.55:0,25,497	0/1:2,4:5:32.01:307,0,32	0/0:10,0:10:26.94:0,27,479	0/0:18,0:18:48.13:0,48,953	0/0:16,0:16:41.88:0,42,814	0/0:8,0:8:12.04:0,12,244	0/0:7,0:7:18.06:0,18,368	0/0:5,0:4:2.92:0,3,17	0/0:9,0:9:27.09:0,27,544	0/0:10,0:10:14.67:0,15,210	./.	0/0:15,0:13:39.12:0,39,778	0/0:19,0:19:51.65:0,52,1071	0/0:13,0:12:30.09:0,30,591	0/0:11,0:11:26.58:0,27,500	0/0:7,0:7:21.07:0,21,429	0/0:13,0:13:32.78:0,33,640	0/0:12,0:10:26.90:0,27,477	0/0:6,0:6:15.05:0,15,315	1/1:0,2:2:6.02:130,6,0	0/0:15,0:15:36.08:0,36,712	./.
chr10	67512110	.	GC	G	4186.57	PASS	AB=0.524;AC=13;AF=0.232;AN=56;BaseQRankSum=9.809;DP=539;FS=1.307;HRun=1;HaplotypeScore=56.9298;InbreedingCoeff=0.8799;MQ=90.45;MQ0=0;MQRankSum=-2.752;QD=34.32;ReadPosRankSum=1.372;VQSLOD=3.4821;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,45:45:99:1535,111,0	1/1:0,9:9:18.06:246,18,0	0/0:25,0:25:46.76:0,47,884	0/0:21,0:21:57.17:0,57,803	1/1:1,8:9:24.08:323,24,0	0/0:17,0:17:51.17:0,51,808	0/0:30,0:30:90.29:0,90,1409	1/1:0,16:16:48.14:649,48,0	0/0:30,0:30:90.31:0,90,1432	0/0:24,0:24:72.20:0,72,1120	0/0:9,0:9:21.07:0,21,335	0/0:22,0:22:63.21:0,63,1005	0/0:14,0:14:42.13:0,42,642	0/0:23,0:23:66.22:0,66,1034	0/0:20,0:20:60.20:0,60,957	0/0:21,0:21:63.19:0,63,972	1/1:1,25:26:57.19:797,57,0	0/0:21,0:21:60.20:0,60,957	0/0:16,0:16:48.15:0,48,746	0/0:14,0:14:42.10:0,42,640	0/0:31,0:31:93.28:0,93,1437	0/0:5,0:5:12.04:0,12,190	0/0:6,0:6:15.04:0,15,217	0/0:39,0:39:99:0,117,1859	0/0:3,0:3:9.03:0,9,144	0/1:1,10:11:14.88:385,0,15	0/0:26,0:26:75.24:0,75,1168	1/1:0,6:6:18.06:252,18,0
chr10	67512417	.	GT	G	2905.40	PASS	AB=0.563;AC=13;AF=0.232;AN=56;BaseQRankSum=7.981;DP=669;FS=0.866;HRun=1;HaplotypeScore=90.7337;InbreedingCoeff=0.9168;MQ=64.38;MQ0=25;MQRankSum=-2.448;QD=23.81;ReadPosRankSum=-2.992;VQSLOD=2.8292;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,24:26:52.93:560,53,0	1/1:3,7:10:20.93:201,21,0	0/0:55,0:23:67.78:0,68,1018	0/0:58,0:21:60.17:0,60,928	1/1:4,16:19:34.12:443,34,0	0/0:24,0:23:65.93:0,66,914	0/0:22,0:22:50.08:0,50,845	1/1:2,24:24:65.50:820,65,0	0/0:15,0:15:45.14:0,45,670	0/0:22,0:21:57.07:0,57,833	0/0:8,0:8:24.06:0,24,331	0/0:24,0:24:25.58:0,26,707	0/0:20,0:20:57.19:0,57,890	0/0:21,0:21:56.06:0,56,887	0/0:24,0:24:72.24:0,72,1117	0/0:19,0:19:48.14:0,48,710	1/1:1,13:11:24.08:331,24,0	0/0:27,0:27:74.23:0,74,1096	0/0:18,0:17:19.18:0,19,487	0/0:23,0:22:54.18:0,54,798	0/0:44,0:44:80.30:0,80,1200	0/0:30,0:30:81.20:0,81,1208	0/0:24,0:24:66.21:0,66,994	0/0:32,0:32:93.78:0,94,1443	0/0:17,0:17:48.15:0,48,698	0/1:4,14:16:5.44:530,0,5	0/0:20,0:20:33.86:0,34,616	1/1:0,6:6:15.05:209,15,0
chr10	67512418	.	TG	T	1014.68	PASS	AB=0.954;AC=16;AF=0.286;AN=56;BaseQRankSum=9.007;DP=672;FS=1.462;HRun=2;HaplotypeScore=99.9757;InbreedingCoeff=0.7819;MQ=62.69;MQ0=26;MQRankSum=-2.191;QD=6.11;ReadPosRankSum=-1.766;VQSLOD=0.1097;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:28:28.62:157,29,0	1/1:10,0:10:11.55:64,12,0	0/0:54,0:22:64.39:0,64,753	0/0:57,1:20:57.17:0,57,701	1/1:20,0:19:29.09:177,29,0	0/0:24,0:23:52.84:0,53,659	0/0:21,1:22:21.85:0,22,636	1/1:26,0:24:54.76:291,55,0	0/0:15,0:15:43.83:0,44,556	0/0:24,0:23:54.80:0,55,682	0/0:8,0:8:23.44:0,23,280	0/1:22,1:23:37.91:38,0,505	0/0:20,0:20:57.13:0,57,766	0/0:21,0:21:44.96:0,45,778	0/0:25,0:25:71.55:0,72,966	0/0:18,0:18:43.87:0,44,584	1/1:14,0:11:23.41:140,23,0	0/0:25,1:26:52.12:0,52,906	0/1:18,1:18:47.12:47,0,324	0/0:24,0:23:53.89:0,54,543	0/0:44,0:44:80.15:0,80,864	0/0:28,0:28:76.89:0,77,1001	0/0:26,0:25:70.10:0,70,844	0/0:32,0:32:91.98:0,92,1211	0/0:16,0:16:45.60:0,46,536	1/1:18,0:16:6.37:205,6,0	0/0:20,1:21:6.60:0,7,348	1/1:6,0:6:14.67:91,15,0
chr10	67512419	.	GGT	G	352.18	PASS	AB=0.916;AC=16;AF=0.286;AN=56;BaseQRankSum=2.744;DP=741;FS=0.000;HRun=0;HaplotypeScore=123.4741;InbreedingCoeff=-0.2422;MQ=60.94;MQ0=26;MQRankSum=1.865;QD=0.90;ReadPosRankSum=1.263;VQSLOD=2.3356;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:37,0:36:0.01:1,0,0	0/0:10,0:13:5.99:0,6,50	1/1:55,0:22:0.47:1,0,0	0/0:61,0:21:5.99:0,6,53	0/1:27,0:27:11.71:22,0,12	0/1:21,0:21:34.62:35,0,319	0/1:20,2:22:53.50:53,0,316	0/0:33,0:32:30.90:0,31,271	0/1:15,2:17:32.01:32,0,385	0/1:21,3:24:37.11:37,0,426	0/1:11,0:11:15.64:16,0,153	0/1:21,5:26:58.41:58,0,348	0/0:22,0:24:42.03:0,42,493	0/0:21,0:22:35.93:0,36,473	0/0:24,1:25:16.14:0,16,602	0/1:15,2:18:9.09:9,0,421	0/0:20,0:17:5.97:0,6,50	0/1:24,2:26:47.72:48,0,597	0/0:16,0:19:15.26:0,15,125	0/0:12,0:26:14.70:0,15,133	0/0:26,0:49:41.99:0,42,334	0/1:24,3:28:3.05:3,0,551	0/1:22,4:25:57.79:58,0,363	0/1:30,1:32:11.78:12,0,543	0/1:13,3:16:99:112,0,258	0/0:23,0:23:28.08:0,28,197	0/0:6,0:20:29.43:0,29,246	0/0:8,0:8:8.92:0,9,65
chr10	67512912	.	GAAGAGAGA	G	730.59	PASS	AB=1.000;AC=11;AF=0.204;AN=54;BaseQRankSum=0.026;DP=342;FS=7.989;HRun=0;HaplotypeScore=77.1187;InbreedingCoeff=0.7451;MQ=63.47;MQ0=30;MQRankSum=-3.012;QD=16.99;ReadPosRankSum=-1.522;VQSLOD=1.2722;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:6,0:6:0.20:47,0,0	1/1:1,2:3:2.90:16,3,0	0/0:42,0:12:13.36:0,13,326	0/0:62,0:14:21.54:0,22,189	1/1:0,1:3:0.24:0,0,0	0/0:5,0:5:12.01:0,12,301	0/0:10,0:10:8.72:0,9,156	1/1:2,8:10:21.05:420,21,0	0/0:10,0:11:26.85:0,27,601	0/0:7,0:7:18.06:0,18,486	0/0:5,0:5:5.95:0,6,61	0/0:5,0:5:8.61:0,9,244	0/0:5,0:5:13.29:0,13,304	0/0:11,0:11:14.33:0,14,355	0/0:10,0:10:18.06:0,18,471	0/0:11,0:11:27.01:0,27,590	1/1:5,4:7:14.98:217,15,0	0/0:14,0:14:33.04:0,33,699	0/0:12,0:12:19.07:0,19,534	0/0:7,0:7:12.60:0,13,149	0/0:20,0:20:33.56:0,34,865	0/0:10,0:10:12.48:0,12,358	0/0:6,0:6:9:0,9,264	0/0:15,0:15:32.72:0,33,1046	0/0:7,0:7:9.50:0,10,234	1/1:9,0:10:14.73:179,15,0	0/0:21,0:20:48.13:0,48,1192	./.
chr10	67512926	.	AAGAG	A	1985.50	PASS	AC=34;AF=0.708;AN=48;BaseQRankSum=2.756;DP=379;FS=6.737;HRun=0;HaplotypeScore=62.3778;InbreedingCoeff=0.5931;MQ=48.83;MQ0=34;MQRankSum=-0.860;QD=10.34;ReadPosRankSum=-0.335;VQSLOD=1.1951;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:9,0:9:6.02:88,6,0	./.	./.	./.	./.	1/1:5,0:8:6.01:71,6,0	1/1:5,9:14:5.75:94,6,0	0/0:14,0:12:0:0,0,0	1/1:14,1:15:20.51:262,21,0	1/1:7,2:13:13.34:213,13,0	0/0:5,1:6:0:0,0,0	1/1:11,1:12:18.03:235,18,0	1/1:6,0:6:3.01:30,3,0	0/0:11,0:11:8.98:0,9,146	1/1:13,0:13:11.25:144,11,0	1/1:7,5:13:18.06:253,18,0	1/1:8,3:11:6.46:69,6,0	1/1:5,4:13:18.04:225,18,0	1/1:10,0:9:2.87:15,3,0	1/1:2,3:5:5.98:67,6,0	0/0:11,7:20:2.74:0,3,13	0/0:16,1:17:19.60:0,20,362	0/0:11,0:10:11.86:0,12,166	0/0:14,0:14:26.53:0,27,438	1/1:6,4:10:2.77:47,3,0	1/1:8,0:7:6.02:87,6,0	1/1:15,5:21:15.03:197,15,0	1/1:5,0:2:0.08:38,0,0
chr10	67513890	.	T	TGG	2358.82	PASS	AB=0.618;AC=12;AF=0.214;AN=56;BaseQRankSum=-3.721;DP=318;FS=10.680;HRun=7;HaplotypeScore=46.8257;InbreedingCoeff=0.7379;MQ=68.75;MQ0=9;MQRankSum=-4.382;QD=23.35;ReadPosRankSum=0.584;VQSLOD=1.0285;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,16:17:39.09:609,39,0	1/1:2,3:5:11.78:160,12,0	0/0:22,0:9:8.76:0,9,82	0/0:27,0:16:13.94:0,14,214	1/1:3,1:9:10.45:36,10,0	0/0:7,0:7:18.05:0,18,210	0/0:9,0:9:21.06:0,21,245	1/1:7,15:21:48.12:735,48,0	0/0:8,0:8:24.07:0,24,280	0/0:12,0:11:27.07:0,27,315	0/0:12,0:11:27.08:0,27,314	0/0:3,0:3:9.03:0,9,105	0/0:9,0:9:18.04:0,18,210	0/0:4,0:4:9.02:0,9,105	0/0:8,0:7:21.06:0,21,244	0/0:5,0:5:9.01:0,9,105	0/1:8,16:23:1.85:459,0,2	0/0:17,0:17:34.47:0,34,415	0/0:15,0:15:36.10:0,36,415	0/0:11,0:11:30.09:0,30,349	0/0:11,0:11:15.04:0,15,175	0/0:3,0:3:6.02:0,6,70	0/0:9,0:9:18.04:0,18,210	0/0:10,0:9:11.78:0,12,140	0/0:7,0:7:21.06:0,21,245	0/1:6,8:14:4.87:383,0,5	0/0:8,0:8:5.99:0,6,70	1/1:1,5:6:9.03:148,9,0
chr10	67514536	.	AG	A	1883.12	PASS	AB=0.533;AC=9;AF=0.180;AN=50;BaseQRankSum=8.980;DP=397;FS=0.559;HRun=2;HaplotypeScore=44.0597;InbreedingCoeff=0.8610;MQ=51.80;MQ0=13;MQRankSum=-1.237;QD=23.25;ReadPosRankSum=-0.036;VQSLOD=3.2352;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,17:17:30.10:389,30,0	1/1:0,8:8:18.06:233,18,0	./.	./.	0/0:14,0:13:36.11:0,36,516	0/0:16,0:16:45:0,45,618	0/0:14,0:14:42.05:0,42,580	1/1:7,13:17:39.09:487,39,0	0/0:20,0:19:51.14:0,51,721	0/0:19,0:19:54.14:0,54,782	0/0:10,0:9:24.08:0,24,355	0/0:13,0:13:36.11:0,36,514	0/0:11,0:11:30.10:0,30,442	0/0:20,0:20:57.18:0,57,831	0/0:15,0:14:36.12:0,36,538	0/0:11,0:10:30.10:0,30,448	1/1:2,16:17:42.14:545,42,0	0/0:22,0:22:57.16:0,57,812	0/0:16,0:14:42.14:0,42,626	0/0:15,0:15:39.12:0,39,565	0/0:16,0:16:45.12:0,45,633	0/0:12,0:11:30.10:0,30,447	0/0:14,0:14:36.12:0,36,538	0/0:22,0:22:59.99:0,60,874	0/0:17,0:16:39.06:0,39,556	0/1:2,14:15:50.64:389,0,51	0/0:15,0:15:45.08:0,45,624	./.
chr10	67514702	.	CGTGAGT	C	4501.95	PASS	AB=0.875;AC=40;AF=0.741;AN=54;BaseQRankSum=-0.696;DP=462;FS=1.829;HRun=0;HaplotypeScore=115.1814;InbreedingCoeff=0.5814;MQ=70.71;MQ0=4;MQRankSum=-1.235;QD=12.61;ReadPosRankSum=2.375;VQSLOD=3.7043;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:19:20.79:163,21,0	1/1:6,0:6:3:25,3,0	0/0:19,0:18:18.77:0,19,225	0/1:28,0:24:7.75:8,0,201	1/1:15,0:15:14.94:116,15,0	1/1:1,8:9:3.01:63,3,0	1/1:35,0:33:44.75:449,45,0	1/1:11,0:11:24.82:199,25,0	1/1:14,3:17:41.53:516,42,0	1/1:18,0:18:29.84:239,30,0	1/1:8,1:9:20.77:170,21,0	0/1:0,7:7:0:0,0,0	0/0:6,0:6:6.01:0,6,124	1/1:14,0:14:17.35:114,17,0	1/1:6,0:6:14.99:148,15,0	1/1:10,1:11:18:211,18,0	0/1:20,0:20:63.92:97,0,64	1/1:21,0:20:35.91:393,36,0	1/1:16,0:16:17.95:172,18,0	./.	1/1:44,1:45:77.82:747,78,0	0/0:13,0:13:26.98:0,27,322	0/0:18,0:18:33:0,33,418	0/0:38,0:38:63.13:0,63,1381	1/1:12,0:12:23.94:194,24,0	0/1:24,0:23:99:226,0,163	1/1:11,0:11:23.92:226,24,0	1/1:2,0:2:3:25,3,0
chr10	67514716	.	TGA	T	1155.85	PASS	AB=1.000;AC=18;AF=0.321;AN=56;BaseQRankSum=5.869;DP=490;FS=26.182;HRun=0;HaplotypeScore=101.6466;InbreedingCoeff=0.4228;MQ=61.19;MQ0=10;MQRankSum=-1.345;QD=5.87;ReadPosRankSum=-2.771;VQSLOD=0.3534;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:20,1:20:24.81:191,25,0	1/1:0,3:3:3:25,3,0	0/0:12,0:11:24.58:0,25,503	0/0:23,0:19:36.74:0,37,673	1/1:13,0:13:26.84:207,27,0	0/1:13,0:13:3.07:3,0,19	0/0:36,0:34:53.51:0,54,574	0/1:26,0:24:26.04:229,0,26	0/1:20,0:20:29.47:29,0,160	0/0:20,0:18:20.41:0,20,361	0/0:12,0:12:18.77:0,19,227	0/0:10,0:10:3.01:0,3,50	0/0:8,0:7:15.03:0,15,221	0/1:19,0:19:17.46:17,0,207	0/0:14,0:14:33.44:0,33,435	0/0:11,0:10:12.34:0,12,159	1/1:19,0:19:35.75:251,36,0	0/1:21,0:20:30.05:30,0,294	0/0:16,0:14:8.56:0,9,225	0/0:10,0:10:3:0,3,25	0/0:50,0:49:15.94:0,16,678	0/0:13,0:13:21.97:0,22,492	0/0:13,0:13:33.11:0,33,631	0/0:33,1:33:24.03:0,24,1185	0/0:11,0:10:15.01:0,15,156	1/1:23,1:22:9.09:301,9,0	0/1:14,0:14:4.36:4,0,279	1/1:4,0:4:5.99:48,6,0
chr10	67514720	.	TGTGA	T	4537.45	PASS	AB=0.985;AC=33;AF=0.589;AN=56;BaseQRankSum=0.060;DP=501;FS=10.347;HRun=0;HaplotypeScore=107.0874;InbreedingCoeff=0.2236;MQ=57.02;MQ0=10;MQRankSum=-1.782;QD=11.34;ReadPosRankSum=1.620;VQSLOD=3.1394;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:22:25.62:199,26,0	1/1:3,0:3:3:25,3,0	0/0:10,0:9:21.14:0,21,228	0/1:19,0:15:7.57:8,0,192	1/1:14,0:14:17.35:131,17,0	1/1:13,0:13:3:31,3,0	1/1:35,3:36:69.56:812,70,0	1/1:28,0:26:7.66:192,8,0	1/1:20,1:21:42.78:429,43,0	0/1:20,0:18:40.46:201,0,40	0/1:12,0:12:3.40:166,0,3	0/0:11,0:11:2.84:0,3,33	0/0:7,0:6:8.85:0,9,119	1/1:17,2:19:1.08:249,1,0	0/1:14,1:15:97.98:98,0,191	0/1:12,1:12:31.80:141,0,32	0/1:18,0:18:5.37:101,0,5	1/1:20,0:19:15.95:320,16,0	0/1:16,0:14:9.23:145,0,9	0/0:11,0:11:5.85:0,6,46	1/1:50,0:49:17.03:637,17,0	0/0:13,0:13:32.33:0,32,292	0/0:14,0:14:35.99:0,36,375	0/0:35,0:34:66.71:0,67,1050	1/1:13,0:12:13.37:181,13,0	0/1:25,0:23:34.79:287,0,35	0/1:16,0:16:73.14:162,0,73	1/1:4,0:4:2.50:24,2,0
chr10	67514724	.	AGT	A	496.49	PASS	AB=0.961;AC=15;AF=0.288;AN=52;BaseQRankSum=3.858;DP=507;FS=22.699;HRun=0;HaplotypeScore=105.9980;InbreedingCoeff=-0.2578;MQ=56.75;MQ0=10;MQRankSum=1.192;QD=1.72;ReadPosRankSum=4.065;VQSLOD=0.3329;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:23:3.46:0,3,24	./.	./.	0/0:19,0:15:0:0,0,0	0/0:12,0:12:8.48:0,8,58	1/1:12,0:13:1.81:7,2,0	0/1:35,0:38:33.89:34,0,82	0/0:27,0:25:20.62:0,21,124	0/1:20,0:20:19.87:55,0,20	0/0:19,0:17:10.59:0,11,138	0/1:11,1:12:24.18:24,0,49	0/0:12,0:12:5.85:0,6,89	0/1:5,1:5:23.93:24,0,59	0/1:16,0:19:14.56:15,0,74	0/0:15,0:15:10.09:0,10,301	0/1:14,0:13:6.36:6,0,118	0/0:18,0:18:10.55:0,11,64	0/1:19,1:19:55.20:66,0,55	0/1:17,0:15:35.04:35,0,44	0/0:12,0:12:6.02:0,6,82	0/1:50,2:51:2.19:213,0,2	0/1:14,1:15:17.90:18,0,99	0/1:13,0:13:9.55:10,0,80	0/1:29,3:31:90.53:91,0,346	0/0:13,0:12:3.01:0,3,31	0/0:27,0:25:27.06:0,27,179	0/1:15,1:16:36.66:37,0,116	0/0:6,0:6:0.47:0,0,1
chr10	67515853	.	C	CA	7193.55	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-13.287;DP=553;FS=2.010;HRun=4;HaplotypeScore=54.6065;InbreedingCoeff=0.9981;MQ=87.34;MQ0=0;MQRankSum=-2.445;QD=42.32;ReadPosRankSum=-0.137;VQSLOD=2.9481;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,30:32:80.94:1258,81,0	1/1:1,9:10:21.07:336,21,0	0/0:27,0:26:61.35:0,61,877	0/0:20,0:20:49.49:0,49,712	1/1:0,29:29:78.27:1245,78,0	0/0:24,0:24:72.20:0,72,984	0/0:11,0:11:33.10:0,33,444	1/1:0,31:31:93.29:1438,93,0	0/0:18,0:18:51.17:0,51,713	0/0:29,0:29:86.88:0,87,1184	0/0:17,0:17:51.17:0,51,713	0/0:14,0:14:39.13:0,39,544	0/0:8,0:8:21.07:0,21,288	0/0:9,0:9:27.09:0,27,375	0/0:21,0:21:63.20:0,63,862	0/0:11,0:11:33.11:0,33,459	1/1:0,28:28:69.23:1089,69,0	0/0:23,0:23:69.21:0,69,946	0/0:18,0:18:54.16:0,54,724	0/0:22,0:22:66.21:0,66,897	0/0:12,0:12:36.12:0,36,503	0/0:20,0:20:60.19:0,60,819	0/0:20,0:20:57.19:0,57,795	0/0:18,0:18:54.17:0,54,736	0/0:14,0:14:42.14:0,42,587	1/1:0,28:29:87.26:1348,87,0	0/0:27,0:27:78.23:0,78,1056	1/1:0,11:11:30.10:479,30,0
chr10	67516115	.	CGAGAGAGCGAGAGAGAGAGAGAGA	C	2652.43	PASS	AB=0.958;AC=13;AF=0.232;AN=56;BaseQRankSum=5.257;DP=622;FS=12.104;HRun=0;HaplotypeScore=298.4663;InbreedingCoeff=0.7903;MQ=55.59;MQ0=28;MQRankSum=4.867;QD=16.79;ReadPosRankSum=-4.028;VQSLOD=0.6399;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:23:17.97:326,18,0	1/1:0,2:2:3.01:187,3,0	0/0:25,0:6:1.41:0,1,27	0/1:40,0:10:1.16:1,0,58	0/0:1,19:20:0.34:0,0,1	0/0:27,0:26:54.14:0,54,2155	0/0:18,0:18:20.29:0,20,555	1/1:16,0:14:36.05:533,36,0	0/0:30,0:28:60.08:0,60,1934	0/0:29,0:28:81.27:0,81,2655	0/0:22,0:22:18.06:0,18,432	0/0:25,0:21:51.07:0,51,1774	0/0:19,0:18:48.15:0,48,2099	0/0:21,0:19:36.11:0,36,1066	0/0:19,0:19:23.76:0,24,1019	0/0:22,0:22:57.19:0,57,1940	1/1:2,36:38:5.67:195,6,0	0/0:16,0:15:36.10:0,36,1460	0/0:23,0:19:48.16:0,48,1664	0/0:18,0:16:30.98:0,31,1108	0/0:24,0:21:27.05:0,27,852	0/0:16,0:16:36.09:0,36,1370	0/0:20,0:20:51.17:0,51,2206	0/0:27,0:27:69.21:0,69,3401	0/0:16,0:14:20.94:0,21,800	1/1:1,27:27:75.10:1504,75,0	0/0:27,0:25:58.77:0,59,2162	1/1:5,0:4:6.02:74,6,0
chr10	67516119	.	AGAGC	A	864.13	PASS	AB=0.965;AC=14;AF=0.250;AN=56;BaseQRankSum=4.874;DP=652;FS=4.313;HRun=0;HaplotypeScore=143.0612;InbreedingCoeff=-0.0779;MQ=54.32;MQ0=32;MQRankSum=-1.773;QD=2.96;ReadPosRankSum=-3.205;VQSLOD=1.7889;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:25:15.68:16,0,302	1/1:2,0:2:3:27,3,0	0/0:34,0:5:4.56:0,5,30	0/0:53,0:11:4.75:0,5,74	0/1:19,0:19:0:0,0,0	0/0:30,0:29:1.47:0,1,271	0/0:16,1:17:15.42:0,15,137	0/1:17,0:15:39.22:39,0,173	0/1:31,1:30:14.22:14,0,366	0/1:32,0:31:99:180,0,250	0/0:21,0:21:17.88:0,18,133	0/1:23,2:21:44.20:44,0,251	0/0:19,0:18:47.77:0,48,658	0/0:22,0:20:32.70:0,33,306	0/0:19,1:20:11.56:0,12,237	0/1:23,1:24:84.97:85,0,457	1/1:37,0:37:3.95:30,4,0	0/0:17,0:16:1.48:0,1,242	0/1:22,2:20:91.83:205,0,92	0/0:16,1:17:2:0,2,125	0/0:15,9:21:17.88:0,18,134	0/0:15,0:15:36:0,36,584	0/0:21,0:21:56.81:0,57,837	0/0:28,0:28:71.98:0,72,1044	0/0:15,1:14:7.65:0,8,140	0/1:28,0:27:99:198,0,331	0/1:23,4:25:99:170,0,241	0/0:5,0:4:5.97:0,6,72
chr10	67516121	.	AGC	A	2609.16	PASS	AB=0.839;AC=24;AF=0.429;AN=56;BaseQRankSum=5.221;DP=653;FS=1.872;HRun=0;HaplotypeScore=118.3539;InbreedingCoeff=-0.4896;MQ=51.16;MQ0=36;MQRankSum=1.281;QD=4.94;ReadPosRankSum=0.514;VQSLOD=2.4485;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:24,3:27:8.69:9,0,310	1/1:2,0:2:3:25,3,0	0/0:37,1:4:2.77:0,3,22	0/1:56,0:9:7.08:7,0,24	0/1:19,0:19:0.12:0,0,0	0/1:17,13:29:99:233,0,211	0/1:8,7:15:27.78:28,0,94	0/1:16,0:14:28.17:28,0,231	0/1:21,11:30:99:107,0,281	0/1:14,18:31:99:607,0,133	0/0:20,0:20:17.88:0,18,133	0/1:22,4:22:99:279,0,141	0/1:17,0:16:22.44:22,0,491	0/1:14,8:20:10.07:10,0,230	0/1:17,2:19:99:113,0,138	0/1:25,0:25:80.20:80,0,265	1/1:37,0:37:2.93:26,3,0	0/1:15,2:16:99:123,0,164	0/1:12,12:20:95.83:270,0,96	0/1:8,9:17:99:165,0,106	0/1:21,3:21:99:110,0,106	0/0:15,0:15:38.95:0,39,520	0/0:20,0:20:6.91:0,7,608	0/0:27,0:27:27.87:0,28,772	0/1:8,7:13:70.59:71,0,126	0/1:28,0:27:99:195,0,323	0/1:21,6:25:99:254,0,216	0/0:5,0:4:5.97:0,6,71
chr10	67516123	.	C	CGAGAGA	5269.37	PASS	AB=0.983;AC=34;AF=0.607;AN=56;BaseQRankSum=-1.868;DP=657;FS=0.516;HRun=0;HaplotypeScore=146.0668;InbreedingCoeff=0.6214;MQ=51.00;MQ0=35;MQRankSum=-3.357;QD=11.33;ReadPosRankSum=1.005;VQSLOD=4.0932;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:26.72:0,27,342	1/1:2,0:2:2.74:12,3,0	0/0:40,0:3:0.47:0,0,1	0/1:62,0:10:9.37:9,0,19	0/1:19,0:19:0:0,0,0	1/1:27,0:29:29.34:455,29,0	1/1:15,0:15:3.95:47,4,0	0/0:3,0:14:18.85:0,19,169	1/1:29,0:30:31.01:507,31,0	1/1:30,0:31:65.31:884,65,0	1/1:7,13:22:0.47:1,0,0	1/1:22,1:21:38.92:510,39,0	0/0:12,0:15:16.27:0,16,473	1/1:21,0:19:12.04:166,12,0	1/1:19,0:20:16.96:274,17,0	0/1:25,0:25:37.60:371,0,38	1/1:36,0:36:2.26:10,2,0	1/1:15,1:16:35.37:464,35,0	1/1:24,0:20:41.88:493,42,0	1/1:17,0:17:12.88:252,13,0	1/1:23,0:21:12.02:211,12,0	0/0:13,0:15:27.04:0,27,437	0/0:17,0:20:34.92:0,35,523	0/0:22,0:26:25.15:0,25,649	1/1:14,0:13:8.24:116,8,0	0/0:28,0:27:19.19:0,19,370	0/1:26,0:26:3.92:487,0,4	0/0:4,0:3:5.97:0,6,71
chr10	67516126	.	G	GC	350.15	PASS	AB=0.948;AC=7;AF=0.125;AN=56;BaseQRankSum=5.284;DP=673;FS=2.254;HRun=0;HaplotypeScore=124.3959;InbreedingCoeff=0.4168;MQ=50.47;MQ0=34;MQRankSum=-1.081;QD=3.13;ReadPosRankSum=0.723;VQSLOD=3.4272;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:22,5:27:55.14:55,0,348	1/1:2,0:2:3.01:42,3,0	0/0:46,0:3:0:0,0,0	0/0:70,0:10:18.35:0,18,155	0/1:19,0:19:0.17:0,0,0	0/0:30,0:29:51.16:0,51,595	0/0:16,0:16:20.96:0,21,243	0/0:15,0:13:1.50:0,1,210	0/0:30,0:28:56.29:0,56,626	0/0:33,0:32:93.02:0,93,1068	0/0:24,0:24:20.61:0,21,271	0/0:25,0:21:57.02:0,57,655	0/0:16,0:15:44.84:0,45,535	0/0:21,0:19:39.12:0,39,505	0/0:20,0:20:32.27:0,32,411	0/0:25,0:25:65.79:0,66,844	1/1:36,0:36:2.42:41,2,0	0/0:16,0:15:38.50:0,39,416	0/0:24,0:21:59.79:0,60,686	0/0:18,0:18:33.06:0,33,398	0/0:22,0:20:27.08:0,27,339	0/0:14,0:14:36.12:0,36,502	0/0:20,0:20:56.87:0,57,717	0/0:28,0:28:74.77:0,75,965	0/0:16,0:14:24.05:0,24,291	0/1:28,0:27:99:324,0,323	0/0:26,0:24:56.49:0,56,602	0/0:5,1:4:9:0,9,105
chr10	67517446	.	GA	G	624.16	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.185;DP=626;FS=9.899;HRun=4;HaplotypeScore=60.9138;InbreedingCoeff=0.9835;MQ=85.52;MQ0=0;MQRankSum=-2.002;QD=26.01;ReadPosRankSum=0.287;VQSLOD=1.9731;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:90.30:0,90,1259	0/0:9,0:9:27.09:0,27,378	0/0:22,0:22:66.22:0,66,924	0/0:19,0:19:48.09:0,48,629	1/1:1,23:24:60.18:719,60,0	0/0:17,0:17:51.17:0,51,714	0/0:21,0:21:60.18:0,60,820	0/0:29,0:29:84.25:0,84,1118	0/0:27,0:27:81.24:0,81,1100	0/0:27,0:27:78.23:0,78,1059	0/0:22,0:22:66.21:0,66,909	0/0:17,0:17:51.17:0,51,710	0/0:21,0:21:60.19:0,60,823	0/0:18,0:18:51.14:0,51,677	0/0:19,0:19:54.18:0,54,756	0/0:16,0:16:45.15:0,45,629	0/0:27,0:27:75.24:0,75,1032	0/0:17,0:17:48.15:0,48,655	0/0:30,0:30:87.29:0,87,1219	0/0:30,0:30:87.29:0,87,1218	0/0:26,0:26:75.23:0,75,1017	0/0:22,0:22:66.22:0,66,924	0/0:28,0:28:81.27:0,81,1133	0/0:19,0:19:54.18:0,54,756	0/0:21,0:21:63.16:0,63,827	0/0:30,0:30:87.29:0,87,1218	0/0:33,0:33:96.30:0,96,1326	0/0:5,0:5:15.05:0,15,210
chr10	67517599	.	G	GTT	2643.66	PASS	AB=0.533;AC=13;AF=0.232;AN=56;BaseQRankSum=-7.097;DP=578;FS=8.712;HRun=2;HaplotypeScore=79.8846;InbreedingCoeff=0.8854;MQ=72.61;MQ0=11;MQRankSum=3.621;QD=16.63;ReadPosRankSum=-2.076;VQSLOD=-0.1967;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,18:26:3.55:194,4,0	1/1:1,6:7:9.03:168,9,0	0/0:35,0:23:43.16:0,43,536	0/0:30,0:18:41.12:0,41,413	1/1:16,1:17:39.13:356,39,0	0/0:20,0:21:53.89:0,54,574	0/0:18,0:18:50.03:0,50,495	1/1:7,28:34:83.47:813,83,0	0/0:18,0:17:48.01:0,48,524	0/0:20,0:20:53.01:0,53,528	0/0:11,0:11:23.72:0,24,217	0/0:17,0:17:44.81:0,45,470	0/0:14,0:14:21.70:0,22,321	0/0:10,0:10:29.98:0,30,300	0/0:21,0:21:60.02:0,60,663	0/0:21,0:21:56.78:0,57,586	1/1:7,24:30:20.17:633,20,0	0/0:17,0:16:44.83:0,45,443	0/0:16,0:15:41.94:0,42,377	0/0:13,0:12:33:0,33,328	0/0:37,0:37:76.68:0,77,795	0/0:15,0:15:41.29:0,41,380	0/0:20,0:20:29.68:0,30,398	0/0:31,0:31:81.08:0,81,945	0/0:18,0:18:24.77:0,25,353	1/1:5,20:27:39.97:557,40,0	0/0:16,0:16:38.43:0,38,399	0/1:2,13:16:3.54:103,0,4
chr10	67520223	.	T	TAC	473.77	PASS	AB=0.938;AC=14;AF=0.280;AN=50;BaseQRankSum=-0.404;DP=603;FS=4.247;HRun=0;HaplotypeScore=91.4648;InbreedingCoeff=0.2034;MQ=59.70;MQ0=13;MQRankSum=-0.322;QD=2.33;ReadPosRankSum=1.135;VQSLOD=1.8466;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:25,2:27:21.16:178,0,21	1/1:5,3:8:3.01:44,3,0	./.	./.	0/0:9,0:13:5.59:0,6,28	0/1:16,0:16:10.67:11,0,101	0/1:21,0:21:3.04:3,0,27	1/1:23,0:21:1.25:3,1,0	0/0:26,0:27:29.90:0,30,303	0/0:20,0:20:9.32:0,9,91	0/1:17,0:17:23.23:40,0,23	0/0:30,0:28:23.46:0,23,205	0/0:19,0:19:10.49:0,10,118	0/0:11,0:11:3.85:0,4,29	0/0:22,0:22:30.15:0,30,254	0/0:17,0:17:14.96:0,15,144	0/1:29,14:45:92.14:215,0,92	0/0:21,0:22:27.86:0,28,208	0/1:16,0:17:18.24:18,0,37	0/0:19,0:21:8.82:0,9,79	0/0:34,0:33:10.52:0,11,124	./.	0/0:14,0:14:11.85:0,12,108	0/0:38,0:38:32.89:0,33,325	0/0:15,0:16:17.87:0,18,170	1/1:20,0:20:9.11:59,9,0	0/0:26,0:28:23.37:0,23,214	1/1:5,2:7:3.01:44,3,0
chr10	67520575	.	T	TGAAA	8460.95	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-12.081;DP=592;FS=2.867;HRun=0;HaplotypeScore=91.5483;InbreedingCoeff=0.9652;MQ=59.91;MQ0=3;MQRankSum=-2.988;QD=50.97;ReadPosRankSum=1.020;VQSLOD=5.5973;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,23:29:54.14:1355,54,0	1/1:1,8:11:24.08:627,24,0	0/0:16,0:14:42.13:0,42,702	0/0:17,0:16:32.80:0,33,671	1/1:7,19:27:54.15:1317,54,0	0/0:17,0:17:45.15:0,45,812	0/0:16,0:16:42.14:0,42,751	1/1:8,18:24:60.12:1301,60,0	0/0:17,0:17:51.16:0,51,885	0/0:32,0:32:90.28:0,90,1551	0/0:14,0:14:42.13:0,42,729	0/0:17,0:17:51.17:0,51,928	0/0:19,0:19:50.95:0,51,897	0/0:13,0:13:33.11:0,33,594	0/0:25,0:25:69.22:0,69,1225	0/0:17,0:17:48.16:0,48,873	1/1:4,25:30:57.20:1493,57,0	0/0:23,0:23:63.11:0,63,1046	0/0:19,0:18:48.15:0,48,816	0/0:21,0:21:57.20:0,57,1030	0/0:33,0:33:96.33:0,96,1746	0/0:15,0:15:36.12:0,36,653	0/0:24,0:24:66.23:0,66,1188	0/0:33,0:33:90.29:0,90,1594	0/0:14,0:14:42.14:0,42,759	1/1:3,19:21:2.62:1347,3,0	0/0:24,0:24:47.44:0,47,1127	1/1:1,16:18:39.13:1021,39,0
chr10	67520976	.	AT	A	3835.81	PASS	AB=0.770;AC=14;AF=0.250;AN=56;BaseQRankSum=13.326;DP=585;FS=0.359;HRun=8;HaplotypeScore=60.1098;InbreedingCoeff=0.8325;MQ=72.24;MQ0=1;MQRankSum=1.289;QD=21.92;ReadPosRankSum=1.145;VQSLOD=3.8547;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,40:41:99:1014,105,0	1/1:0,10:10:27.04:261,27,0	0/1:8,0:8:2.89:3,0,74	0/0:9,0:10:15.19:0,15,104	1/1:4,25:29:69.10:666,69,0	0/0:22,0:22:60.15:0,60,693	0/0:20,1:21:28.18:0,28,599	1/1:5,23:28:68.88:621,69,0	0/0:15,0:15:45.13:0,45,534	0/0:34,0:34:90.22:0,90,1042	0/0:26,0:26:72.18:0,72,829	0/0:16,0:17:47.98:0,48,523	0/0:14,0:14:39.08:0,39,436	0/0:14,0:14:33.08:0,33,378	0/0:23,0:23:63.19:0,63,761	0/0:14,0:14:42.10:0,42,484	1/1:0,22:22:48.08:463,48,0	0/0:26,0:25:66.20:0,66,796	0/0:19,0:19:45.14:0,45,542	0/0:22,0:22:57.14:0,57,652	0/0:8,0:8:12.04:0,12,145	0/0:27,0:27:71.81:0,72,840	0/0:23,0:23:63.19:0,63,761	0/0:28,0:28:72.20:0,72,857	0/0:27,0:27:72.21:0,72,860	0/1:3,17:20:18.42:402,0,18	0/0:20,0:20:54.12:0,54,607	1/1:0,16:16:42.07:406,42,0
chr10	67521398	.	T	TCCCCCTTCC	3537.09	PASS	AB=0.600;AC=13;AF=0.232;AN=56;BaseQRankSum=0.776;DP=444;FS=29.106;HRun=0;HaplotypeScore=123.4374;InbreedingCoeff=0.7761;MQ=83.32;MQ0=0;MQRankSum=-5.957;QD=52.79;ReadPosRankSum=-2.177;VQSLOD=1.0483;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,11:23:24.08:1011,24,0	1/1:1,4:6:2.97:146,3,0	0/0:21,0:21:63.17:0,63,1473	0/0:25,0:24:57.13:0,57,1181	1/1:4,0:3:3.44:21,3,0	0/0:15,0:15:45.15:0,45,1275	0/0:29,0:29:84.22:0,84,2180	1/1:7,11:22:57.16:1952,57,0	0/0:18,0:18:51.16:0,51,1436	0/0:18,0:18:51.17:0,51,1470	0/0:17,0:17:48.15:0,48,1365	0/0:22,0:22:58.61:0,59,1838	0/0:16,0:16:48.16:0,48,1411	0/0:13,0:13:39.13:0,39,1152	0/0:11,0:11:33.11:0,33,1013	0/0:23,0:23:66.20:0,66,1658	1/1:6,0:6:3.01:146,3,0	0/0:11,0:11:30.08:0,30,804	0/0:18,0:18:48.15:0,48,1138	0/0:21,0:21:60.18:0,60,1682	0/0:27,0:27:81.26:0,81,2323	0/0:15,0:15:42.14:0,42,1200	0/0:14,0:14:37.93:0,38,1038	0/0:18,0:18:51.13:0,51,1317	0/0:10,0:10:30.09:0,30,852	0/1:1,1:3:83.10:162,0,83	0/0:14,0:14:39.11:0,39,1013	1/1:3,0:3:9:99,9,0
chr10	67521907	.	G	GT	1003.40	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-1.860;DP=580;FS=13.691;HRun=1;HaplotypeScore=57.5101;InbreedingCoeff=0.9983;MQ=74.98;MQ0=0;MQRankSum=-1.863;QD=35.84;ReadPosRankSum=-0.162;VQSLOD=2.1642;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,126,1632	0/0:9,0:9:27.09:0,27,348	0/0:18,0:17:38.82:0,39,488	0/0:19,0:19:49.02:0,49,587	1/1:1,27:28:75.21:1098,75,0	0/0:18,0:18:54.18:0,54,700	0/0:19,0:19:57.19:0,57,740	0/0:31,0:31:90.27:0,90,1142	0/0:13,0:13:39.13:0,39,505	0/0:20,0:20:60.18:0,60,755	0/0:14,0:14:36.12:0,36,467	0/0:13,0:13:39.13:0,39,506	0/0:20,0:20:60.19:0,60,778	0/0:20,0:20:60.19:0,60,774	0/0:19,0:19:57.19:0,57,740	0/0:16,0:16:48.16:0,48,623	0/0:31,0:31:93.30:0,93,1207	0/0:24,0:24:72.23:0,72,935	0/0:11,0:11:33.11:0,33,428	0/0:19,0:19:51.17:0,51,662	0/0:29,0:29:87.28:0,87,1128	0/0:21,0:21:54.18:0,54,700	0/0:16,0:16:48.15:0,48,611	0/0:25,0:25:75.20:0,75,955	0/0:15,0:15:45.15:0,45,584	0/0:28,0:28:81.26:0,81,1052	0/0:26,0:25:78.22:0,78,983	0/0:15,0:15:45.15:0,45,583
chr10	67523807	.	AT	A	3041.31	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=16.398;DP=531;FS=1.935;HRun=1;HaplotypeScore=111.8895;InbreedingCoeff=0.9969;MQ=58.18;MQ0=2;MQRankSum=-10.729;QD=11.56;ReadPosRankSum=-1.500;VQSLOD=1.4834;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,114,1419	0/0:10,0:10:30.10:0,30,394	0/0:17,0:14:26.28:0,26,410	0/0:9,0:7:20.25:0,20,226	0/0:15,0:14:41.91:0,42,509	1/1:15,1:16:41.39:222,41,0	1/1:17,1:18:42.10:215,42,0	0/0:24,0:24:69.10:0,69,826	1/1:24,3:27:67.78:375,68,0	1/1:16,1:16:39.52:225,40,0	1/1:22,1:21:49.73:267,50,0	1/1:14,0:14:36.25:190,36,0	0/0:15,0:15:45.08:0,45,534	1/1:6,2:8:17.21:98,17,0	1/1:22,1:22:42.51:221,43,0	1/1:17,0:17:41.61:187,42,0	0/0:28,0:27:81.13:0,81,1040	1/1:11,0:10:24.78:122,25,0	1/1:15,4:19:31.40:264,31,0	1/1:20,3:22:51.53:298,52,0	1/1:9,0:9:21.93:107,22,0	0/0:18,0:18:51.09:0,51,636	0/0:20,0:20:57.10:0,57,715	0/0:21,0:21:52:0,52,631	1/1:14,1:15:36.84:213,37,0	0/0:34,0:34:84.35:0,84,1263	1/1:23,0:23:50.62:271,51,0	0/0:10,0:10:30.10:0,30,396
chr10	67523816	.	A	AGAT	12461.05	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=14.651;DP=535;FS=9.780;HRun=0;HaplotypeScore=105.8434;InbreedingCoeff=0.9964;MQ=61.59;MQ0=0;MQRankSum=-11.208;QD=47.38;ReadPosRankSum=2.138;VQSLOD=6.9298;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,108,1855	0/0:10,0:10:30.02:0,30,463	0/0:17,0:16:45.02:0,45,714	0/0:9,0:7:21.06:0,21,335	0/0:17,0:17:45.11:0,45,745	1/1:0,16:17:39.13:874,39,0	1/1:1,16:17:33.11:730,33,0	0/0:26,0:26:69.23:0,69,1177	1/1:2,21:24:60.21:1289,60,0	1/1:2,17:19:48.16:986,48,0	1/1:2,21:22:45.62:925,46,0	1/1:3,9:15:30.05:628,30,0	0/0:13,0:13:39.12:0,39,656	1/1:4,6:12:15.05:278,15,0	1/1:0,19:20:45.15:989,45,0	1/1:1,15:17:45.15:1003,45,0	0/0:33,0:32:96.31:0,96,1598	1/1:1,9:10:30.10:645,30,0	1/1:4,14:20:60.11:1125,60,0	1/1:3,19:21:48.16:963,48,0	1/1:2,8:13:21.54:427,22,0	0/0:20,0:20:54.14:0,54,889	0/0:21,0:21:63.13:0,63,1067	0/0:18,0:18:51.10:0,51,809	1/1:0,13:14:36.12:784,36,0	0/0:35,1:36:40.10:0,40,1678	1/1:1,14:17:36.12:814,36,0	0/0:10,0:10:30.10:0,30,528
chr10	67523907	.	G	GAC	4122.42	PASS	AB=0.869;AC=23;AF=0.411;AN=56;BaseQRankSum=5.446;DP=698;FS=12.306;HRun=0;HaplotypeScore=180.5036;InbreedingCoeff=-0.0773;MQ=57.17;MQ0=15;MQRankSum=0.589;QD=10.36;ReadPosRankSum=-0.586;VQSLOD=2.2000;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:10.62:0,11,207	0/1:6,0:6:4.16:4,0,107	0/0:89,0:27:64.74:0,65,621	0/0:73,0:39:60.89:0,61,707	0/1:16,0:16:0.88:1,0,112	0/1:13,7:20:43.69:242,0,44	0/1:21,8:28:51.76:306,0,52	0/1:36,0:35:99:131,0,773	1/1:7,2:9:10.39:135,10,0	1/1:25,7:31:25.20:488,25,0	0/1:16,4:18:4.90:167,0,5	1/1:8,5:14:20.53:281,21,0	0/0:11,0:11:30.09:0,30,405	0/1:12,3:16:13.83:121,0,14	1/1:14,6:19:2.08:375,2,0	0/1:13,3:16:52.53:201,0,53	0/0:28,0:28:25.63:0,26,316	0/1:22,7:28:99:329,0,120	0/1:10,1:10:8.99:101,0,9	0/1:19,3:22:99:143,0,109	0/1:25,4:29:89.78:227,0,90	0/0:17,0:17:45.15:0,45,629	0/0:8,0:8:21.05:0,21,272	0/0:28,0:28:72.22:0,72,1001	0/1:21,5:27:32.82:304,0,33	0/1:20,0:20:30.93:31,0,425	0/1:17,9:26:33.82:533,0,34	0/0:12,0:12:19.51:0,20,356
chr10	67523909	.	CAG	C	1802.44	PASS	AB=0.986;AC=16;AF=0.286;AN=56;BaseQRankSum=3.994;DP=697;FS=66.107;HRun=0;HaplotypeScore=176.8656;InbreedingCoeff=-0.1851;MQ=56.23;MQ0=15;MQRankSum=4.081;QD=5.63;ReadPosRankSum=-1.468;VQSLOD=0.8003;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:23.34:0,23,232	0/0:6,0:6:17.96:0,18,169	0/0:87,0:25:61.40:0,61,655	0/0:74,0:39:33.95:0,34,614	0/0:15,0:15:14.44:0,14,117	0/1:19,1:20:61.24:61,0,105	0/1:31,0:30:39.40:287,0,39	0/0:37,0:36:43.92:0,44,761	0/1:9,0:9:3.45:29,0,3	1/1:30,0:29:17.18:359,17,0	0/1:20,0:18:18.11:149,0,18	0/1:13,0:13:31.26:31,0,39	0/0:13,0:13:25.99:0,26,398	0/1:16,0:16:11.02:122,0,11	0/1:20,0:19:57.55:104,0,58	0/1:17,0:17:23.36:23,0,88	0/0:26,0:26:32.80:0,33,262	0/1:29,0:28:99:126,0,180	0/1:12,0:11:14.42:124,0,14	0/1:21,1:22:99:158,0,107	0/1:29,0:29:99:123,0,106	0/0:17,0:17:23.58:0,24,659	0/0:8,0:8:4.40:0,4,179	0/0:28,0:28:51.51:0,52,985	0/1:23,3:26:72.64:236,0,73	0/0:20,0:20:48.69:0,49,452	0/1:26,0:26:32.59:33,0,100	0/0:13,0:13:29.89:0,30,256
chr10	67523911	.	G	GACACACACACAC	5532.60	PASS	AB=1.000;AC=28;AF=0.500;AN=56;BaseQRankSum=-8.079;DP=731;FS=1.539;HRun=0;HaplotypeScore=284.8667;InbreedingCoeff=0.0881;MQ=55.79;MQ0=16;MQRankSum=-6.014;QD=9.54;ReadPosRankSum=-8.792;VQSLOD=0.7809;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:16,16:39:9.03:431,9,0	1/1:3,1:9:8.92:417,9,0	1/1:90,0:27:14:482,14,0	0/1:76,0:40:1.83:464,0,2	1/1:5,0:22:1.69:114,2,0	0/0:21,0:21:9.67:0,10,479	0/1:31,0:30:27.99:28,0,431	1/1:38,0:37:52.64:1366,53,0	0/0:9,0:9:10.57:0,11,94	0/1:32,0:31:81.16:81,0,187	0/1:19,0:17:10.51:11,0,98	0/1:13,0:13:52.16:52,0,144	0/0:12,0:13:24.06:0,24,570	0/1:17,0:17:9.01:9,0,168	0/1:20,0:19:78.78:79,0,333	0/1:17,0:17:65.85:66,0,404	1/1:16,0:36:11.58:500,12,0	0/0:30,0:29:5.08:0,5,890	0/1:11,0:10:24.58:25,0,129	0/1:21,0:21:9.89:10,0,682	0/1:30,0:29:18.52:19,0,513	0/0:15,0:17:33.10:0,33,977	0/0:7,0:8:6.02:0,6,188	0/0:23,0:28:48.16:0,48,1500	0/1:27,0:27:99:108,0,388	1/1:18,1:20:24.08:1056,24,0	0/0:25,0:25:29.64:0,30,654	1/1:12,0:12:9.01:215,9,0
chr10	67525150	.	AAG	A	67.05	PASS	AB=0.855;AC=3;AF=0.054;AN=56;BaseQRankSum=4.945;DP=445;FS=1.400;HRun=0;HaplotypeScore=77.5831;InbreedingCoeff=-0.0679;MQ=49.60;MQ0=42;MQRankSum=-1.480;QD=1.43;ReadPosRankSum=1.776;VQSLOD=1.5375;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:14,3:15:9.51:10,0,585	0/0:4,0:4:12.04:0,12,224	0/0:3,0:3:9.03:0,9,147	0/0:4,0:3:6.02:0,6,88	0/0:11,0:10:23.54:0,24,181	0/0:14,0:12:36.12:0,36,670	0/0:30,0:27:71.75:0,72,1344	0/0:17,0:10:30.10:0,30,538	0/0:14,0:13:33:0,33,628	0/0:25,0:19:57.18:0,57,1009	0/0:12,0:10:15.05:0,15,283	0/0:33,0:30:72.23:0,72,1370	0/0:11,0:11:33.11:0,33,602	0/0:12,0:9:21.07:0,21,408	0/0:16,0:14:30.10:0,30,608	0/0:25,0:21:47.46:0,47,928	0/1:6,4:9:99:138,0,259	0/0:20,1:18:15.15:0,15,764	0/0:13,0:11:20.16:0,20,243	0/0:16,0:13:25.39:0,25,129	0/0:31,0:27:62.88:0,63,1063	0/0:16,0:13:39.08:0,39,682	0/0:8,0:8:24.08:0,24,470	0/0:32,0:32:82.65:0,83,1479	0/0:12,0:11:33.09:0,33,632	0/1:20,0:18:12.31:12,0,417	0/0:14,0:13:12.30:0,12,136	0/0:3,0:2:6.02:0,6,122
chr10	67525157	.	GAAGGAGGAAGGA	G	2061.64	PASS	AB=1.000;AC=14;AF=0.259;AN=54;BaseQRankSum=5.968;DP=452;FS=27.972;HRun=0;HaplotypeScore=144.4648;InbreedingCoeff=0.1605;MQ=48.73;MQ0=47;MQRankSum=-2.821;QD=8.81;ReadPosRankSum=-0.448;VQSLOD=0.7920;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:16:27.92:0,28,268	0/0:4,0:4:9.82:0,10,74	0/0:3,0:3:2.97:0,3,20	./.	0/1:13,0:12:47.77:48,0,121	0/0:13,0:11:25.35:0,25,441	0/1:32,0:29:99:334,0,774	0/0:19,0:10:18.06:0,18,292	0/0:15,0:13:21.81:0,22,396	0/1:24,0:18:99:253,0,605	0/0:11,0:9:12.03:0,12,165	0/1:34,0:31:38.45:38,0,867	0/0:10,0:10:30.10:0,30,921	0/1:12,0:9:53.22:53,0,143	0/0:18,0:15:30.09:0,30,485	0/1:24,0:20:35.48:35,0,638	0/0:12,0:11:17.50:0,18,144	0/1:20,0:16:99:118,0,351	1/1:6,8:12:20.19:469,20,0	1/1:4,14:15:36:506,36,0	0/1:29,0:25:99:144,0,501	0/0:15,0:12:28.86:0,29,557	0/0:9,0:8:24.08:0,24,714	0/0:30,0:30:68.31:0,68,1385	0/0:12,0:11:30.09:0,30,506	0/0:21,0:19:31.66:0,32,389	1/1:1,13:13:6.02:229,6,0	0/0:5,0:4:7.38:0,7,94
chr10	67525161	.	GAGGAAGGA	G	2516.67	PASS	AB=0.553;AC=29;AF=0.604;AN=48;BaseQRankSum=-1.789;DP=450;FS=6.281;HRun=0;HaplotypeScore=120.1912;InbreedingCoeff=0.6247;MQ=49.01;MQ0=47;MQRankSum=-3.159;QD=8.25;ReadPosRankSum=1.220;VQSLOD=1.5794;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:17:15.83:0,16,144	0/0:5,0:5:2.96:0,3,19	./.	./.	0/0:13,0:12:12.03:0,12,145	1/1:13,0:11:11.96:142,12,0	1/1:27,0:29:26.87:427,27,0	./.	1/1:11,6:15:3.01:75,3,0	1/1:23,0:21:18.06:370,18,0	./.	1/1:23,11:31:9.03:217,9,0	0/0:10,0:10:18.05:0,18,519	1/1:12,0:10:9.03:205,9,0	1/1:13,6:16:2.96:19,3,0	1/1:20,5:21:3.01:73,3,0	0/0:9,0:13:7.23:0,7,37	1/1:17,0:14:12.04:294,12,0	1/1:15,0:13:12.04:287,12,0	1/1:18,0:15:11.48:133,11,0	1/1:24,0:23:11.92:171,12,0	0/0:12,0:9:3.01:0,3,53	0/0:9,0:8:9.03:0,9,329	0/0:25,0:25:35.15:0,35,933	1/1:12,0:11:6.01:86,6,0	0/1:4,1:19:53.22:53,0,120	1/1:14,0:13:5.77:134,6,0	0/0:3,0:4:1.36:0,1,3
chr10	67525192	.	GA	G	2429.63	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=8.237;DP=519;FS=48.239;HRun=2;HaplotypeScore=77.6272;InbreedingCoeff=0.9632;MQ=52.89;MQ0=46;MQRankSum=2.029;QD=26.41;ReadPosRankSum=3.822;VQSLOD=0.6173;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,18:18:54.17:694,54,0	1/1:0,2:2:6.02:76,6,0	0/0:13,0:9:23.06:0,23,277	0/0:5,0:4:9.03:0,9,126	1/1:2,5:6:15.05:194,15,0	0/0:16,0:14:40.37:0,40,544	0/0:38,0:36:99:0,103,1291	1/1:6,13:12:36.10:453,36,0	0/0:19,0:17:32.82:0,33,445	0/0:31,0:26:64.98:0,65,765	0/0:16,0:14:30.10:0,30,421	0/0:27,0:24:38.36:0,38,509	0/0:13,0:13:39.13:0,39,562	0/0:24,0:20:48.10:0,48,610	0/0:25,0:22:48.12:0,48,621	0/0:23,0:20:39.59:0,40,533	1/1:2,14:14:42.11:515,42,0	0/0:16,0:14:19.09:0,19,360	0/0:19,0:16:31.20:0,31,389	0/0:18,0:15:23.29:0,23,300	0/0:30,0:26:63.21:0,63,753	0/0:10,0:7:21.07:0,21,301	0/0:11,0:10:30.10:0,30,433	0/0:38,0:36:93.24:0,93,1317	0/0:17,0:16:48.14:0,48,649	1/1:18,0:17:32.97:381,33,0	0/0:18,0:17:22.42:0,22,242	1/1:2,8:8:24.08:310,24,0
chr10	67526175	.	TTGTGTGTGTGTG	T	202.68	PASS	AC=6;AF=0.120;AN=50;BaseQRankSum=3.419;DP=478;FS=4.961;HRun=0;HaplotypeScore=146.2348;InbreedingCoeff=0.4949;MQ=64.44;MQ0=26;MQRankSum=0.102;QD=6.76;ReadPosRankSum=0.630;VQSLOD=2.4901;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:26:8.97:0,9,69	0/0:7,0:6:9.03:0,9,295	./.	./.	1/1:5,0:5:0.38:1,0,0	0/0:22,0:22:24.08:0,24,914	0/0:24,0:23:12.04:0,12,420	0/0:22,0:21:5.94:0,6,41	0/0:14,0:14:9.03:0,9,279	0/0:20,0:18:9.03:0,9,240	0/0:14,0:14:21.05:0,21,589	0/0:15,0:15:9.03:0,9,449	0/0:7,0:7:12.04:0,12,433	0/0:16,0:15:18.06:0,18,628	0/0:11,0:9:10.28:0,10,378	0/0:11,0:11:6.02:0,6,275	0/0:22,0:21:19:0,19,303	0/0:27,0:25:31.80:0,32,995	0/0:19,0:18:9.02:0,9,190	0/0:11,0:11:6.02:0,6,144	0/0:24,0:21:6.49:0,6,302	0/0:11,0:9:0.47:0,0,1	./.	0/0:37,0:34:48.16:0,48,1791	0/0:17,0:14:9.49:0,9,200	1/1:15,3:18:5.79:202,6,0	0/0:17,0:16:6.02:0,6,145	1/1:3,4:5:3.01:95,3,0
chr10	67526224	.	TGA	T	1356.54	PASS	AB=1.000;AC=34;AF=0.739;AN=46;BaseQRankSum=1.352;DP=408;FS=6.716;HRun=0;HaplotypeScore=65.3933;InbreedingCoeff=0.0097;MQ=41.25;MQ0=50;MQRankSum=-0.387;QD=3.82;ReadPosRankSum=0.945;VQSLOD=0.9062;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:24:32.81:249,33,0	./.	./.	./.	1/1:13,0:12:2.45:17,2,0	1/1:20,0:16:17.64:128,18,0	1/1:20,1:19:11.65:83,12,0	0/0:16,0:14:1.36:0,1,2	0/1:19,0:17:8.65:9,0,64	1/1:7,6:10:14.46:92,14,0	0/1:11,0:8:4.39:25,0,4	0/1:14,0:13:0.42:33,0,0	1/1:7,0:6:5.16:27,5,0	0/0:11,0:9:2.92:0,3,17	1/1:10,0:8:5.97:45,6,0	1/1:12,0:11:17.50:117,17,0	1/1:24,0:22:21.06:143,21,0	0/1:17,0:14:0.45:62,0,0	1/1:13,0:10:5.91:38,6,0	./.	1/1:16,0:13:11.33:78,11,0	0/1:15,0:12:12.39:12,0,55	0/1:10,0:8:12.11:29,0,12	0/1:51,0:43:97.68:98,0,182	1/1:16,0:12:8.94:65,9,0	1/1:16,0:13:11.04:92,11,0	0/1:9,0:6:0.51:35,0,1	./.
chr10	67526362	.	GTT	G	1615.81	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=1.782;DP=453;FS=0.507;HRun=11;HaplotypeScore=73.2601;InbreedingCoeff=0.8819;MQ=66.11;MQ0=10;MQRankSum=1.518;QD=17.01;ReadPosRankSum=4.192;VQSLOD=2.3464;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:17,2:19:29.20:308,29,0	1/1:5,0:5:15.01:145,15,0	0/0:37,0:19:0.72:0,1,194	0/0:19,0:10:8.61:0,9,123	0/0:13,0:12:11.68:0,12,57	0/0:24,0:23:37.83:0,38,407	0/0:19,0:17:35.87:0,36,461	1/1:26,2:26:40.56:423,41,0	0/0:14,0:13:23.77:0,24,276	0/0:17,0:18:42.09:0,42,566	0/0:18,0:18:47.92:0,48,643	0/0:6,0:6:8.98:0,9,100	0/0:8,0:6:16.56:0,17,175	0/0:10,0:10:23.57:0,24,245	0/0:7,0:7:18:0,18,212	0/0:10,0:10:27:0,27,342	1/1:11,0:11:28.92:240,29,0	0/0:7,0:7:12.01:0,12,139	0/0:21,0:21:54.10:0,54,726	0/0:22,0:22:43.62:0,44,481	0/0:12,0:10:15.03:0,15,207	0/0:23,0:22:50.13:0,50,611	0/0:27,0:26:47.53:0,48,679	0/0:12,0:11:26.06:0,26,264	0/0:18,0:18:31.66:0,32,344	1/1:13,3:16:35.05:312,35,0	0/0:9,0:10:17.93:0,18,180	1/1:16,0:16:5.71:368,6,0
chr10	67526373	.	TG	T	1665.35	PASS	AB=0.944;AC=20;AF=0.357;AN=56;BaseQRankSum=4.861;DP=441;FS=1.992;HRun=1;HaplotypeScore=63.8908;InbreedingCoeff=0.3652;MQ=59.21;MQ0=24;MQRankSum=-1.274;QD=7.78;ReadPosRankSum=-0.280;VQSLOD=0.7424;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,11:18:21.76:228,22,0	1/1:2,4:6:17.34:145,17,0	0/1:27,3:13:26.83:27,0,80	0/1:18,0:9:7.46:7,0,35	1/1:10,2:11:29.27:211,29,0	0/0:19,0:18:4.02:0,4,136	0/0:20,0:17:11.99:0,12,209	1/1:20,5:23:38.27:324,38,0	0/0:12,0:11:10.14:0,10,100	0/0:17,0:15:35.58:0,36,301	0/0:18,0:17:27.58:0,28,272	0/1:8,0:8:2.07:2,0,33	0/1:8,0:6:9.90:10,0,19	0/1:10,0:10:10.34:10,0,54	0/1:8,0:7:0.82:1,0,92	0/0:9,0:9:22.35:0,22,130	1/1:9,6:12:34.32:303,34,0	0/0:8,0:7:4.04:0,4,38	0/0:21,1:21:30.35:0,30,310	0/1:21,0:20:10.54:11,0,166	0/0:13,0:8:11.59:0,12,77	0/0:23,0:22:33.01:0,33,339	0/0:22,0:20:37.17:0,37,381	0/0:14,0:11:0.16:0,0,149	0/0:19,0:19:16.39:0,16,147	0/1:7,9:16:9.58:263,0,10	0/0:11,0:9:4.43:0,4,36	1/1:13,5:18:40.14:305,40,0
chr10	67526374	.	G	GT	2521.35	PASS	AB=0.823;AC=42;AF=0.750;AN=56;BaseQRankSum=0.614;DP=449;FS=0.578;HRun=14;HaplotypeScore=65.5351;InbreedingCoeff=-0.1615;MQ=57.07;MQ0=26;MQRankSum=-0.435;QD=5.81;ReadPosRankSum=0.112;VQSLOD=2.2901;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:19,1:19:16.61:188,0,17	1/1:6,1:7:14.95:121,15,0	1/1:28,0:11:1.55:4,2,0	0/1:18,0:9:1.97:7,0,2	1/1:12,1:12:5.79:51,6,0	0/1:10,10:18:18.20:87,0,18	0/1:13,8:18:25.58:141,0,26	0/1:24,2:24:23.84:128,0,24	1/1:7,2:8:5.99:50,6,0	1/1:9,9:16:17.43:129,17,0	0/1:9,9:17:8.69:160,0,9	1/1:3,6:9:6.47:52,6,0	0/1:7,1:6:10.44:10,0,19	1/1:6,4:10:14.54:106,15,0	0/1:5,4:7:24.58:67,0,25	1/1:4,6:10:23.50:178,24,0	1/1:13,2:12:25.33:174,25,0	1/1:3,4:7:11.98:101,12,0	1/1:16,6:20:3.69:130,4,0	1/1:9,12:20:2.10:158,2,0	1/1:9,4:8:6:53,6,0	0/1:20,2:22:21.86:22,0,105	0/1:21,2:21:12.44:12,0,162	0/0:15,0:11:22.71:0,23,137	0/1:9,8:18:7.22:66,0,7	0/1:14,3:17:18.76:185,0,19	1/1:6,6:10:17.49:137,17,0	1/1:16,2:18:1.54:157,2,0
chr10	67526965	.	AGGGAG	A	2409.22	PASS	AB=1.000;AC=34;AF=0.630;AN=54;BaseQRankSum=-1.361;DP=217;FS=0.000;HRun=0;HaplotypeScore=33.8357;InbreedingCoeff=0.2108;MQ=47.92;MQ0=34;MQRankSum=-0.388;QD=14.78;ReadPosRankSum=-0.852;VQSLOD=1.9581;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:16,0:11:13.36:174,0,13	0/0:3,0:2:3.01:0,3,36	0/0:3,0:1:2.22:0,2,7	0/0:9,0:5:5.64:0,6,47	0/1:7,0:3:14.97:15,0,16	0/0:8,0:6:0:0,0,0	0/1:8,0:5:45.72:62,0,46	1/1:7,6:9:21.48:304,21,0	1/1:6,0:5:9.02:136,9,0	0/1:12,0:8:33.68:349,0,34	1/1:4,0:3:3:25,3,0	./.	0/1:4,0:4:40.69:41,0,41	1/1:4,0:2:6.02:116,6,0	1/1:5,0:4:6.02:124,6,0	1/1:4,0:3:6:85,6,0	1/1:17,0:14:11.08:384,11,0	1/1:6,0:2:1.25:3,1,0	1/1:4,0:4:7.85:77,8,0	1/1:8,0:7:11.68:173,12,0	0/1:19,0:11:20.83:37,0,21	0/0:14,0:13:18.06:0,18,353	0/0:10,0:8:15.04:0,15,293	0/0:5,0:4:3:0,3,25	1/1:9,0:7:6.02:118,6,0	1/1:6,0:2:6.02:116,6,0	1/1:4,0:4:8.56:156,9,0	1/1:7,0:7:2.94:76,3,0
chr10	67526969	.	AG	A	1227.63	PASS	AB=0.837;AC=32;AF=0.640;AN=50;BaseQRankSum=1.285;DP=209;FS=1.004;HRun=3;HaplotypeScore=38.2035;InbreedingCoeff=0.0953;MQ=38.37;MQ0=37;MQRankSum=-0.262;QD=7.77;ReadPosRankSum=-0.727;VQSLOD=0.2738;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:11,3:8:19.99:64,0,20	0/0:2,0:1:3.01:0,3,34	./.	0/0:7,0:3:0.30:0,0,22	./.	0/0:4,4:6:0:0,0,0	0/1:6,2:5:23.16:23,0,34	0/1:12,0:9:15.06:135,0,15	1/1:1,4:4:6.01:62,6,0	0/1:9,7:11:16.18:218,0,16	./.	0/1:2,0:2:0:0,0,0	0/1:4,0:4:15.91:16,0,43	1/1:2,2:2:6.02:76,6,0	1/1:2,4:5:6.02:75,6,0	1/1:2,0:1:3.01:37,3,0	0/1:10,7:15:1.43:193,0,1	1/1:4,3:2:0.89:2,1,0	1/1:0,1:1:3.01:37,3,0	1/1:4,2:5:6.36:76,6,0	0/1:10,10:14:8.59:14,0,9	0/0:13,0:11:18.03:0,18,227	0/0:9,0:7:12.03:0,12,165	1/1:5,0:4:0.58:1,1,0	1/1:0,9:7:6.02:74,6,0	1/1:4,3:2:6.02:75,6,0	1/1:3,2:5:7.46:111,7,0	1/1:3,5:6:6.02:75,6,0
chr10	67528542	.	CT	C	947.23	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.299;DP=567;FS=7.243;HRun=4;HaplotypeScore=57.1403;InbreedingCoeff=0.9754;MQ=76.69;MQ0=1;MQRankSum=-1.369;QD=28.70;ReadPosRankSum=-0.481;VQSLOD=2.7982;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,132,1818	0/0:13,0:13:39.12:0,39,530	0/0:17,0:17:45.15:0,45,624	0/0:15,0:14:35.96:0,36,436	1/1:1,32:33:90.17:1042,90,0	0/0:21,0:21:60.10:0,60,768	0/0:20,0:20:57.17:0,57,778	0/0:33,0:33:96.29:0,96,1285	0/0:11,0:11:33.11:0,33,455	0/0:29,0:29:84.27:0,84,1159	0/0:14,0:14:42.12:0,42,550	0/0:13,0:13:25.95:0,26,491	0/0:7,0:7:21.02:0,21,255	0/0:21,0:21:60.19:0,60,824	0/0:24,0:24:69.21:0,69,947	0/0:11,0:11:33.10:0,33,445	0/0:26,0:26:72.21:0,72,987	0/0:30,0:30:84.24:0,84,1137	0/0:12,0:12:27.05:0,27,370	0/0:32,0:32:90.27:0,90,1208	0/0:5,0:5:15.04:0,15,192	0/0:12,0:12:33.10:0,33,444	0/0:21,0:21:60.20:0,60,837	0/0:9,0:9:24.08:0,24,336	0/0:30,0:30:84.27:0,84,1159	0/0:21,0:21:60.17:0,60,795	0/0:25,0:25:75.24:0,75,1031	0/0:15,0:15:45.15:0,45,616
chr10	67528778	.	CAG	C	1397.16	PASS	AB=0.585;AC=11;AF=0.196;AN=56;BaseQRankSum=12.280;DP=700;FS=6.723;HRun=0;HaplotypeScore=127.7232;InbreedingCoeff=0.8027;MQ=53.85;MQ0=14;MQRankSum=-2.238;QD=8.90;ReadPosRankSum=-4.837;VQSLOD=1.9988;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:37,11:48:40.51:315,41,0	1/1:7,4:11:20.70:166,21,0	0/0:3,0:1:3.01:0,3,34	0/0:4,0:1:3.01:0,3,47	0/0:24,0:23:8.67:0,9,60	0/0:20,0:20:54.19:0,54,981	0/0:31,0:31:75.24:0,75,1341	0/1:11,0:37:81.93:82,0,104	0/0:29,0:28:75.24:0,75,1305	0/0:42,0:40:99:0,114,2017	0/0:14,0:14:24.07:0,24,395	0/0:16,0:16:39.10:0,39,610	0/0:20,0:20:60.20:0,60,1076	0/0:32,0:32:90.31:0,90,1636	0/0:26,0:26:69.22:0,69,1213	0/0:23,0:23:35.96:0,36,471	1/1:17,6:23:38.70:279,39,0	0/0:34,0:34:93.27:0,93,1639	0/0:21,0:19:45.12:0,45,728	0/0:27,0:27:72.19:0,72,1182	0/0:49,0:45:99:0,129,2310	0/0:17,0:17:36.12:0,36,659	0/0:21,0:21:54.15:0,54,927	0/0:44,0:43:99:0,102,1771	0/0:21,0:20:60.18:0,60,1009	1/1:13,12:27:19.13:618,19,0	0/0:25,0:24:72.25:0,72,1320	1/1:7,1:6:16.81:112,17,0
chr10	67528780	.	GAGACAGAGAC	G	289.07	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=7.785;DP=687;FS=10.466;HRun=0;HaplotypeScore=227.4992;InbreedingCoeff=0.1505;MQ=53.63;MQ0=14;MQRankSum=-3.371;QD=2.54;ReadPosRankSum=-0.293;VQSLOD=1.2864;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:46:12.38:0,12,280	0/1:10,0:10:3.65:4,0,43	0/0:3,0:1:3.01:0,3,43	0/0:7,0:3:9.03:0,9,115	1/1:12,11:22:9.03:162,9,0	0/0:21,0:21:60.21:0,60,2030	0/0:28,0:28:75.24:0,75,2200	0/0:40,0:37:41.94:0,42,440	0/0:29,0:28:66.23:0,66,2349	0/0:42,0:40:99:0,114,3151	0/0:11,0:11:18.53:0,19,683	0/0:15,0:15:27.09:0,27,863	0/0:21,0:21:63.18:0,63,2233	0/0:31,0:31:90.31:0,90,2823	0/0:24,0:24:66.21:0,66,1925	0/1:23,0:23:61.97:62,0,197	0/1:22,0:22:14.90:15,0,191	0/0:35,0:35:93.07:0,93,2983	0/0:17,0:15:38.81:0,39,941	0/0:27,0:27:60.21:0,60,2187	0/0:51,0:47:99:0,126,3931	0/0:14,0:14:36.12:0,36,1334	0/0:21,0:21:51.17:0,51,1808	0/0:42,0:41:93.28:0,93,2599	0/0:21,0:20:57.18:0,57,1876	0/1:27,0:27:99:161,0,304	0/0:25,0:24:72.25:0,72,2726	0/1:8,0:7:8.54:9,0,87
chr10	67528784	.	CAG	C	1809.17	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=14.660;DP=671;FS=1.350;HRun=0;HaplotypeScore=122.6892;InbreedingCoeff=0.9327;MQ=53.51;MQ0=14;MQRankSum=-4.628;QD=10.83;ReadPosRankSum=-4.384;VQSLOD=2.3679;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:35,10:43:39.23:276,39,0	1/1:4,4:8:11.75:92,12,0	0/0:6,0:3:6.01:0,6,58	0/0:9,1:5:14.93:0,15,163	1/1:19,1:19:2.55:6,3,0	0/0:23,0:23:66.23:0,66,1143	0/0:28,0:28:75.24:0,75,1283	1/1:37,0:34:48.21:660,48,0	0/0:26,0:25:69.23:0,69,1199	0/0:41,0:39:99:0,113,1847	0/0:12,0:12:24.55:0,25,421	0/0:13,0:13:30.09:0,30,491	0/0:21,0:21:63.18:0,63,1054	0/0:32,0:32:93.32:0,93,1594	0/0:24,0:24:69.22:0,69,1163	0/0:24,0:23:11.76:0,12,214	1/1:15,6:21:36.90:248,37,0	0/0:33,0:33:71.45:0,71,1500	0/0:18,0:16:46.14:0,46,665	0/0:22,0:22:60.21:0,60,1048	0/0:53,0:49:99:0,135,2242	0/0:13,0:13:36.12:0,36,647	0/0:19,0:19:54.17:0,54,920	0/0:39,1:39:87.05:0,87,1448	0/0:21,0:20:45.36:0,45,947	1/1:18,10:28:21.39:598,21,0	0/0:25,0:24:72.25:0,72,1257	1/1:7,1:7:16.70:115,17,0
chr10	67528786	.	G	GAC	2875.30	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=13.488;DP=687;FS=3.149;HRun=0;HaplotypeScore=124.8462;InbreedingCoeff=0.9506;MQ=53.28;MQ0=14;MQRankSum=-4.919;QD=18.31;ReadPosRankSum=-4.594;VQSLOD=2.5513;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:29,19:46:41.66:679,42,0	1/1:6,1:7:11.54:137,12,0	0/0:5,0:3:6.01:0,6,70	0/0:13,0:6:17.98:0,18,215	0/0:19,0:18:7.02:0,7,35	0/0:23,0:23:66.22:0,66,1005	0/0:29,0:29:77.87:0,78,1145	1/1:36,8:41:43.20:841,43,0	0/0:26,0:25:69.23:0,69,1050	0/0:43,0:41:99:0,113,1643	0/0:12,0:12:24.08:0,24,362	0/0:12,0:12:30.09:0,30,434	0/0:22,0:22:63.18:0,63,926	0/0:32,0:32:93.32:0,93,1416	0/0:25,0:25:69.22:0,69,1030	0/0:8,0:23:33.01:0,33,371	1/1:14,6:20:38.72:570,39,0	0/0:33,1:34:46.74:0,47,1302	0/0:18,0:16:46.13:0,46,597	0/0:22,0:22:60.12:0,60,915	0/0:54,0:50:99:0,138,2012	0/0:14,0:14:39.12:0,39,576	0/0:19,0:19:54.17:0,54,803	0/0:37,0:37:75.42:0,75,1287	0/0:21,0:20:60.12:0,60,849	1/1:22,6:28:25.47:598,25,0	0/0:25,0:24:72.24:0,72,1094	1/1:6,4:9:17.37:234,17,0
chr10	67529885	.	T	TA	487.56	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.652;DP=609;FS=9.339;HRun=9;HaplotypeScore=78.7851;InbreedingCoeff=0.7923;MQ=69.83;MQ0=0;MQRankSum=-0.793;QD=16.81;ReadPosRankSum=-2.116;VQSLOD=2.6613;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:83.62:0,84,470	0/0:15,0:15:40.04:0,40,200	0/0:15,0:13:11.01:0,11,149	0/0:18,0:17:23.29:0,23,184	1/1:6,23:29:46.64:582,47,0	0/0:22,0:22:56.94:0,57,486	0/0:14,0:14:38.99:0,39,338	0/0:33,0:33:45.08:0,45,306	0/0:29,0:29:80.93:0,81,694	0/0:19,0:18:44.98:0,45,389	0/0:26,1:27:44.77:0,45,609	0/0:16,0:16:41.99:0,42,365	0/0:15,0:15:35.94:0,36,304	0/0:18,0:19:53.02:0,53,448	0/0:23,0:23:62.98:0,63,547	0/0:15,0:15:41.94:0,42,352	0/0:29,0:29:21.55:0,22,287	0/0:25,0:25:49.90:0,50,441	0/0:25,0:25:61.66:0,62,537	0/0:31,0:31:83.95:0,84,723	0/0:16,0:16:38.97:0,39,334	0/0:13,0:13:35.99:0,36,312	0/0:17,0:17:32.89:0,33,284	0/0:23,0:23:59.86:0,60,505	0/0:16,0:16:41.97:0,42,361	0/0:24,1:25:43.05:0,43,261	0/0:32,1:33:56.75:0,57,715	0/0:11,0:11:1.61:0,2,109
chr10	67530045	.	AAAAC	A	4092	PASS	AB=0.981;AC=14;AF=0.250;AN=56;BaseQRankSum=10.284;DP=592;FS=0.915;HRun=0;HaplotypeScore=97.2525;InbreedingCoeff=0.8210;MQ=69.45;MQ0=6;MQRankSum=-0.020;QD=21.31;ReadPosRankSum=-0.962;VQSLOD=3.3807;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,31:38:70.08:1096,70,0	1/1:0,9:9:20.99:313,21,0	0/1:25,0:21:15.71:16,0,150	0/0:16,0:14:21.54:0,22,433	0/0:39,0:39:84.29:0,84,1606	0/0:20,0:20:45.15:0,45,1063	0/0:28,0:28:43.17:0,43,1306	1/1:15,13:28:36.11:550,36,0	0/0:20,0:20:48.16:0,48,1134	0/0:25,0:25:51.17:0,51,1158	0/1:24,1:25:6.72:7,0,847	0/0:14,0:14:39.13:0,39,900	0/0:16,0:16:42.14:0,42,951	0/0:13,0:13:24.08:0,24,560	0/0:22,0:22:48.15:0,48,1083	0/0:19,0:19:48.14:0,48,985	1/1:8,14:22:30.10:488,30,0	0/0:15,0:14:21.07:0,21,504	0/0:14,0:13:15.05:0,15,359	0/0:26,0:26:51.17:0,51,1152	0/0:13,0:13:30.05:0,30,581	0/0:17,0:17:24.08:0,24,547	0/0:24,0:24:57.20:0,57,1284	0/0:20,0:20:48.14:0,48,1036	0/0:12,0:12:24.08:0,24,580	1/1:8,23:31:69.22:1085,69,0	0/0:27,0:27:69.18:0,69,1467	1/1:0,14:14:33.11:537,33,0
chr10	67530143	.	CATCTGAGCAA	C	1390.81	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.087;DP=603;FS=7.042;HRun=0;HaplotypeScore=174.4637;InbreedingCoeff=0.9916;MQ=79.57;MQ0=0;MQRankSum=-6.527;QD=73.20;ReadPosRankSum=-0.862;VQSLOD=2.9420;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,111,5989	0/0:13,0:13:39.13:0,39,1961	0/0:11,0:11:33.11:0,33,1386	0/0:20,0:20:57.19:0,57,2256	1/1:0,19:19:45.15:1486,45,0	0/0:15,0:15:42.14:0,42,2266	0/0:19,0:19:57.20:0,57,3037	0/0:22,0:22:66.22:0,66,3078	0/0:21,0:21:63.22:0,63,3082	0/0:19,0:19:57.18:0,57,2768	0/0:18,0:18:54.19:0,54,2562	0/0:22,0:22:63.22:0,63,3262	0/0:21,0:21:63.22:0,63,3112	0/0:14,0:14:42.14:0,42,2168	0/0:21,0:21:63.22:0,63,3305	0/0:18,0:18:54.17:0,54,2541	0/0:26,0:26:72.25:0,72,3764	0/0:19,0:19:57.20:0,57,2907	0/0:21,0:21:63.22:0,63,3190	0/0:25,0:25:69.20:0,69,3392	0/0:56,0:56:99:0,169,8866	0/0:17,0:17:51.17:0,51,2383	0/0:19,0:19:57.16:0,57,2635	0/0:21,0:21:60.21:0,60,3235	0/0:6,0:6:18.06:0,18,826	0/0:30,0:30:90.27:0,90,4453	0/0:34,0:34:99:0,102,4673	0/0:17,0:17:42.14:0,42,1713
chr10	67530312	.	GA	G	416.94	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.204;DP=622;FS=2.155;HRun=9;HaplotypeScore=71.3232;InbreedingCoeff=0.7139;MQ=73.40;MQ0=1;MQRankSum=-1.007;QD=12.26;ReadPosRankSum=-0.972;VQSLOD=3.1591;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,123,1383	0/0:8,0:9:23.89:0,24,248	0/0:34,0:22:38.07:0,38,385	0/0:32,0:25:39.10:0,39,410	1/1:33,1:34:81.26:511,81,0	0/0:19,0:19:57.16:0,57,649	0/0:17,0:17:42.12:0,42,484	0/0:25,0:25:38.78:0,39,700	0/0:20,0:20:57.13:0,57,629	0/0:28,0:28:77.91:0,78,889	0/0:23,0:23:69.06:0,69,769	0/0:14,0:14:33.10:0,33,381	0/0:13,0:13:39.11:0,39,441	0/0:10,0:10:3.61:0,4,251	0/0:19,0:18:26.80:0,27,561	0/0:12,1:13:5.63:0,6,319	0/0:34,0:34:87.23:0,87,982	0/0:29,0:29:78.23:0,78,899	0/0:27,0:28:63.02:0,63,705	0/0:21,1:24:29.19:0,29,558	0/0:13,1:14:5.63:0,6,319	0/0:10,0:10:27.06:0,27,294	0/0:25,2:27:41.72:0,42,716	0/0:15,0:15:35.51:0,36,415	0/0:10,0:10:24.07:0,24,277	0/0:24,0:24:63.19:0,63,727	0/0:33,0:33:93.26:0,93,1063	0/0:21,0:21:63.19:0,63,727
chr10	67530850	.	T	TATCACAG	12439.03	PASS	AB=0.611;AC=13;AF=0.232;AN=56;BaseQRankSum=-8.058;DP=547;FS=4.795;HRun=0;HaplotypeScore=121.8681;InbreedingCoeff=0.8971;MQ=95.08;MQ0=0;MQRankSum=-14.211;QD=92.83;ReadPosRankSum=-1.188;VQSLOD=5.8450;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,21:28:63.22:2545,63,0	1/1:2,10:14:30.10:1219,30,0	0/0:36,0:36:81.31:0,81,2193	0/0:21,0:21:55.47:0,55,1254	1/1:1,9:10:27.09:1071,27,0	0/0:15,0:15:45.15:0,45,1162	0/0:25,0:25:75.24:0,75,1926	1/1:4,15:19:57.18:2057,57,0	0/0:25,0:25:72.25:0,72,1941	0/0:24,0:24:69.24:0,69,1796	0/0:26,0:26:75.26:0,75,1991	0/0:9,0:9:24.08:0,24,640	0/0:18,0:18:54.19:0,54,1446	0/0:13,0:13:36.12:0,36,958	0/0:25,0:25:72.25:0,72,1931	0/0:12,0:12:33.11:0,33,863	1/1:2,14:18:42.14:1697,42,0	0/0:8,0:8:18.06:0,18,485	0/0:19,0:19:57.20:0,57,1478	0/0:26,0:26:78.27:0,78,2074	0/0:14,0:14:33.10:0,33,791	0/0:25,0:25:75.26:0,75,2014	0/0:16,0:16:45.15:0,45,1213	0/0:19,0:19:54.19:0,54,1436	0/0:18,0:18:54.19:0,54,1429	0/1:12,18:33:99:2873,0,152	0/0:19,0:19:57.20:0,57,1509	1/1:0,9:10:24.08:977,24,0
chr10	67531119	.	T	TA	2504.38	PASS	AB=0.981;AC=14;AF=0.259;AN=54;BaseQRankSum=11.375;DP=522;FS=8.760;HRun=12;HaplotypeScore=78.1695;InbreedingCoeff=0.8721;MQ=80.49;MQ0=1;MQRankSum=-3.232;QD=12.78;ReadPosRankSum=-0.051;VQSLOD=3.1280;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,27:34:16.24:472,16,0	1/1:1,6:7:12.02:117,12,0	0/1:22,0:21:1.92:2,0,73	0/0:15,0:16:15.60:0,16,87	./.	0/0:18,0:18:41.69:0,42,306	0/0:20,0:23:49.85:0,50,340	1/1:6,19:25:32.17:468,32,0	0/0:14,0:14:32.76:0,33,237	0/0:19,1:23:27.17:0,27,317	0/0:12,0:13:22.85:0,23,156	0/0:15,0:15:24.90:0,25,245	0/0:14,0:14:41.65:0,42,299	0/0:11,0:11:26.77:0,27,193	0/0:14,0:14:38.77:0,39,285	0/0:11,0:11:23.82:0,24,175	1/1:6,29:34:50.21:650,50,0	0/0:17,0:17:35.71:0,36,259	0/1:18,0:18:0.54:1,0,258	0/0:15,0:16:37.70:0,38,258	0/0:19,0:18:50.71:0,51,372	0/0:19,0:19:44.09:0,44,314	0/0:13,0:13:32.69:0,33,232	0/0:27,2:29:42.33:0,42,468	0/0:19,1:20:29.03:0,29,302	1/1:11,23:34:37.97:510,38,0	0/0:17,0:17:35.75:0,36,263	1/1:1,16:17:48.08:467,48,0
chr10	67531176	.	AC	A	175.24	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=1.894;DP=544;FS=0.000;HRun=4;HaplotypeScore=76.6690;InbreedingCoeff=0.9932;MQ=83.24;MQ0=0;MQRankSum=-2.407;QD=17.52;ReadPosRankSum=-0.014;VQSLOD=2.9952;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:87.27:0,87,1193	0/0:13,0:13:36.11:0,36,484	0/0:15,0:15:32.99:0,33,397	0/0:18,0:18:39.05:0,39,578	1/1:1,9:10:23.95:269,24,0	0/0:18,0:18:51.17:0,51,714	0/0:21,0:21:60.14:0,60,800	0/0:25,0:25:60.20:0,60,825	0/0:14,0:14:39.13:0,39,546	0/0:24,0:24:65.92:0,66,837	0/0:18,0:18:54.18:0,54,755	0/0:20,0:20:57.16:0,57,763	0/0:14,0:14:42.13:0,42,568	0/0:14,0:14:39.11:0,39,512	0/0:14,0:14:42.14:0,42,588	0/0:9,0:9:21.07:0,21,293	0/0:27,0:26:69.18:0,69,919	0/0:15,0:15:42.14:0,42,583	0/0:29,0:29:78.23:0,78,1052	0/0:21,0:21:63.20:0,63,865	0/0:16,0:16:48.16:0,48,672	0/0:16,0:16:48.15:0,48,650	0/0:15,0:15:42.14:0,42,583	0/0:32,0:31:90.30:0,90,1254	0/0:24,0:24:69.20:0,69,920	0/0:34,0:34:96.32:0,96,1332	0/0:21,0:21:63.21:0,63,881	0/0:14,0:14:42.14:0,42,569
chr10	67532341	.	AT	A	4211.53	PASS	AB=0.887;AC=23;AF=0.411;AN=56;BaseQRankSum=7.323;DP=626;FS=0.000;HRun=12;HaplotypeScore=74.5551;InbreedingCoeff=0.8026;MQ=66.54;MQ0=2;MQRankSum=-1.221;QD=14.04;ReadPosRankSum=1.696;VQSLOD=5.3794;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,48:58:99:958,125,0	1/1:2,10:12:29.37:218,29,0	0/0:21,0:17:5.28:0,5,181	0/1:13,0:13:3.33:3,0,165	0/0:6,1:23:29.78:0,30,266	0/0:20,0:20:48.03:0,48,462	0/0:23,1:25:30.57:0,31,442	1/1:3,16:19:44.75:339,45,0	0/0:17,0:18:41.90:0,42,398	0/0:27,1:28:42.81:0,43,596	0/0:9,0:10:23.87:0,24,219	0/0:17,1:18:24.85:0,25,428	1/1:2,13:15:35.84:279,36,0	0/0:22,1:23:27.90:0,28,464	0/0:29,0:29:75.06:0,75,735	0/1:12,2:15:4.56:5,0,307	1/1:5,30:35:77.65:604,78,0	0/0:21,2:23:30.85:0,31,486	0/1:18,4:22:16.92:17,0,480	0/0:19,0:19:42:0,42,478	0/0:22,1:23:60.04:0,60,590	1/1:3,11:15:31.77:229,32,0	1/1:0,9:9:23.88:184,24,0	1/1:5,30:35:71.67:557,72,0	0/0:21,0:21:48.10:0,48,487	1/1:8,25:34:19.35:494,19,0	0/0:25,0:22:54.10:0,54,544	1/1:0,17:17:41.84:325,42,0
chr10	67532550	.	ATGTGTGTGTTTGTGTGTGTGTG	A	1611.01	PASS	AB=0.991;AC=11;AF=0.196;AN=56;BaseQRankSum=-0.644;DP=534;FS=3.528;HRun=0;HaplotypeScore=257.7759;InbreedingCoeff=0.6270;MQ=57.73;MQ0=17;MQRankSum=-3.621;QD=10.89;ReadPosRankSum=-1.035;VQSLOD=1.7045;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:32,0:32:50.84:409,51,0	1/1:0,7:7:14.98:701,15,0	0/0:33,0:15:31.18:0,31,351	0/1:34,0:23:5.35:5,0,271	0/0:18,0:18:32.69:0,33,346	0/0:13,0:13:30.08:0,30,1809	0/0:24,0:23:48.13:0,48,2269	1/1:19,0:17:29.72:234,30,0	0/0:15,0:15:35.21:0,35,698	0/0:21,0:21:53.96:0,54,1901	0/0:15,0:14:37.60:0,38,1616	0/0:19,0:19:39.06:0,39,1823	0/0:17,0:15:42.57:0,43,2357	0/0:16,0:15:33.09:0,33,1959	0/0:8,0:8:21.05:0,21,1164	0/0:12,0:12:21.05:0,21,1146	1/1:2,21:23:3.01:178,3,0	0/0:23,0:22:62.95:0,63,2607	0/0:15,0:15:23.06:0,23,769	0/0:11,0:11:26.07:0,26,676	0/0:24,0:23:50.65:0,51,1707	0/0:17,0:16:47.23:0,47,1248	0/0:13,0:12:26.47:0,26,742	0/0:31,0:31:74.37:0,74,4700	0/0:20,0:20:53.13:0,53,2147	0/1:17,0:16:99:134,0,421	0/0:21,0:20:52.85:0,53,1585	0/1:15,0:13:72.01:112,0,72
chr10	67532560	.	TTGTG	T	744.92	PASS	AB=0.967;AC=20;AF=0.417;AN=48;BaseQRankSum=2.105;DP=540;FS=8.946;HRun=0;HaplotypeScore=106.4256;InbreedingCoeff=0.3919;MQ=54.59;MQ0=27;MQRankSum=-2.775;QD=3.50;ReadPosRankSum=0.963;VQSLOD=1.5704;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:33:7.30:0,7,44	1/1:8,0:7:10.83:89,11,0	./.	./.	0/0:11,0:19:2.92:0,3,17	0/0:14,0:14:18.06:0,18,331	0/1:26,1:24:16.92:130,0,17	./.	1/1:10,0:17:11.74:97,12,0	0/0:20,0:20:10.18:0,10,173	0/0:14,0:15:5.64:0,6,123	0/1:17,1:16:31.19:31,0,180	0/0:17,0:16:13.60:0,14,233	0/0:16,0:16:17.78:0,18,271	1/1:5,2:7:6.49:93,6,0	0/0:6,0:9:8.76:0,9,125	1/1:23,0:23:3:28,3,0	1/1:17,7:22:21.04:320,21,0	1/1:16,0:16:0.47:1,0,0	1/1:8,1:9:3.01:46,3,0	0/1:22,1:22:12.23:40,0,12	0/0:18,0:18:11.02:0,11,79	0/0:11,0:13:9.02:0,9,144	0/0:34,0:35:54.10:0,54,814	0/1:21,0:21:12.70:13,0,109	0/0:19,0:17:3.69:0,4,61	1/1:20,0:19:2.77:16,3,0	./.
chr10	67537457	.	TA	T	371.15	PASS	AB=0.897;AC=10;AF=0.179;AN=56;BaseQRankSum=7.287;DP=552;FS=5.758;HRun=14;HaplotypeScore=68.5884;InbreedingCoeff=0.1513;MQ=80.08;MQ0=0;MQRankSum=2.072;QD=2.60;ReadPosRankSum=3.473;VQSLOD=-0.6207;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,2:30:14.88:0,15,433	0/1:5,2:7:20.15:20,0,118	0/1:19,0:19:4.02:4,0,97	0/1:13,0:12:12.63:13,0,16	1/1:11,12:25:5.74:168,6,0	0/0:20,0:21:41.84:0,42,365	0/0:12,1:14:6.28:0,6,189	0/0:31,1:33:57.03:0,57,516	0/0:12,1:13:6.45:0,6,202	0/0:23,2:26:0.04:0,0,306	0/1:16,3:20:22.86:23,0,237	0/0:10,0:10:23.97:0,24,203	0/1:12,2:14:14.17:14,0,157	0/0:18,1:20:17.19:0,17,177	0/0:23,1:24:27.27:0,27,371	1/1:6,12:21:38.77:244,39,0	0/0:20,0:21:26:0,26,258	0/0:23,1:24:36.37:0,36,451	0/0:23,2:25:9.73:0,10,363	0/0:23,0:23:45.01:0,45,402	0/0:18,0:18:6.45:0,6,184	0/0:11,0:12:11.17:0,11,130	0/0:19,2:21:1.76:0,2,290	0/0:14,1:16:8.59:0,9,243	0/1:20,4:24:28.40:28,0,317	0/0:22,1:23:14.93:0,15,261	0/0:16,0:19:23.51:0,24,355	0/0:16,0:16:36:0,36,318
chr10	67537644	.	TTTTG	T	4518.95	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=12.433;DP=608;FS=2.530;HRun=0;HaplotypeScore=98.4723;InbreedingCoeff=0.9947;MQ=74.95;MQ0=0;MQRankSum=-4.277;QD=33.47;ReadPosRankSum=0.208;VQSLOD=4.8098;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:13,32:45:87.29:1449,87,0	1/1:2,7:9:18.06:300,18,0	0/0:26,0:22:36.12:0,36,708	0/0:30,0:30:31.35:0,31,678	0/0:31,0:31:72.25:0,72,1759	0/0:21,0:21:51.18:0,51,1254	0/0:16,0:16:30.09:0,30,653	1/1:9,20:29:60.19:972,60,0	0/0:25,0:25:63.22:0,63,1519	0/0:19,0:19:54.19:0,54,1321	0/0:25,0:25:63.21:0,63,1553	0/0:15,0:15:39.13:0,39,951	0/0:10,0:10:30.10:0,30,713	0/0:18,0:18:33.10:0,33,764	0/0:27,0:27:63.22:0,63,1554	0/0:17,0:17:42.14:0,42,1003	1/1:2,17:19:39.13:649,39,0	0/0:18,0:18:15.70:0,16,787	0/0:26,0:26:39.03:0,39,904	0/0:22,0:22:48.16:0,48,1174	0/0:23,0:23:50.66:0,51,1168	0/0:18,0:18:48.15:0,48,1134	0/0:18,0:18:45.15:0,45,1100	0/0:27,0:27:60.21:0,60,1469	0/0:17,0:17:39.13:0,39,954	1/1:5,16:21:45.15:749,45,0	0/0:24,0:24:51.17:0,51,1235	1/1:2,10:12:24.08:400,24,0
chr10	67538103	.	GCA	G	330.99	PASS	AB=0.891;AC=14;AF=0.269;AN=52;BaseQRankSum=3.062;DP=398;FS=1.862;HRun=0;HaplotypeScore=51.3168;InbreedingCoeff=-0.2218;MQ=65.22;MQ0=15;MQRankSum=1.260;QD=1.73;ReadPosRankSum=1.118;VQSLOD=1.4445;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:36:18.03:0,18,211	0/0:0,0:1:3:0,3,26	./.	./.	1/1:6,4:12:14.71:126,15,0	0/1:13,4:17:17.47:17,0,163	0/1:23,0:25:16.64:17,0,289	0/0:22,0:21:15.01:0,15,173	0/0:12,0:12:6.02:0,6,89	0/1:11,0:10:35.52:48,0,36	0/1:8,3:11:46.99:47,0,157	0/0:8,0:8:12.01:0,12,139	0/1:9,0:9:14.46:14,0,80	0/1:9,0:9:23.28:23,0,76	0/1:7,0:8:5.12:5,0,80	0/0:5,0:5:9.03:0,9,133	0/0:12,0:31:26.92:0,27,225	0/1:10,2:12:58.10:58,0,137	0/1:11,1:13:33.64:34,0,117	0/1:10,1:11:14.47:14,0,182	0/0:27,0:26:12.04:0,12,178	0/0:2,0:2:3.01:0,3,43	0/0:5,0:5:6.02:0,6,83	0/1:27,3:28:40.99:41,0,221	0/1:16,1:18:33.94:34,0,207	0/0:9,0:11:14.92:0,15,153	0/0:13,0:13:27.09:0,27,396	0/0:2,0:3:1.55:0,2,4
chr10	67538354	.	AAAG	A	1266.41	PASS	AB=0.905;AC=25;AF=0.543;AN=46;BaseQRankSum=4.699;DP=384;FS=2.534;HRun=0;HaplotypeScore=58.3971;InbreedingCoeff=0.6953;MQ=50.53;MQ0=39;MQRankSum=-0.321;QD=7.28;ReadPosRankSum=0.600;VQSLOD=2.3766;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	0/0:17,0:17:20.67:0,21,148	1/1:6,7:13:18.06:230,18,0	1/1:12,5:16:5.98:58,6,0	./.	1/1:5,0:10:5.47:30,5,0	1/1:17,2:18:11.96:121,12,0	0/0:18,0:18:21.06:0,21,362	1/1:4,8:10:0.28:174,0,0	0/0:5,0:6:6.02:0,6,78	1/1:5,7:12:6.02:77,6,0	1/1:6,7:14:15.01:174,15,0	1/1:9,8:17:18.02:212,18,0	1/1:4,0:2:2.04:6,2,0	1/1:13,11:20:24.08:306,24,0	0/0:18,0:16:9.02:0,9,138	0/0:14,0:13:20.74:0,21,343	0/1:17,2:16:17.25:17,0,308	0/0:11,0:15:17.99:0,18,210	0/0:21,0:20:15.05:0,15,238	0/0:22,0:21:27.09:0,27,498	0/0:19,0:18:33.10:0,33,580	1/1:9,0:6:2.84:14,3,0	0/0:20,0:19:30.10:0,30,555	1/1:3,0:3:5.10:22,5,0
chr10	67538407	.	AG	A	585.67	PASS	AB=0.680;AC=11;AF=0.196;AN=56;BaseQRankSum=8.424;DP=493;FS=4.091;HRun=1;HaplotypeScore=68.0311;InbreedingCoeff=0.8905;MQ=67.54;MQ0=14;MQRankSum=-4.815;QD=11.95;ReadPosRankSum=-2.076;VQSLOD=1.3031;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,2:4:8.75:50,9,0	1/1:2,1:2:5.81:32,6,0	0/0:30,0:20:55.05:0,55,733	0/0:20,0:11:21.79:0,22,297	0/0:17,0:17:51.17:0,51,745	0/0:19,0:19:45.33:0,45,504	0/0:18,0:18:41.10:0,41,536	1/1:9,4:11:32.58:230,33,0	0/0:12,0:12:24.92:0,25,319	0/0:24,0:22:64.44:0,64,790	0/0:24,0:24:69.23:0,69,1019	0/0:21,0:20:46.29:0,46,510	0/0:16,0:15:42.13:0,42,570	0/0:16,0:15:25.14:0,25,311	0/0:19,0:19:42.15:0,42,495	0/0:21,0:21:47.18:0,47,525	1/1:4,2:5:14.79:100,15,0	0/0:27,0:25:49.41:0,49,517	0/0:19,0:16:48.16:0,48,700	0/0:16,0:16:48.16:0,48,719	0/0:20,0:20:53.17:0,53,730	0/0:12,0:12:33.10:0,33,432	0/0:17,0:16:39.13:0,39,575	0/0:22,0:21:57.19:0,57,855	0/0:27,0:27:81.27:0,81,1210	0/1:9,7:15:1.46:218,0,1	0/0:27,0:26:78.23:0,78,1112	1/1:3,2:6:17.77:123,18,0
chr10	67538408	.	G	GA	1272	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=7.829;DP=499;FS=6.211;HRun=2;HaplotypeScore=65.8841;InbreedingCoeff=0.9327;MQ=68.33;MQ0=14;MQRankSum=-6.294;QD=24.94;ReadPosRankSum=-2.325;VQSLOD=2.5671;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:2,2:4:9.03:114,9,0	1/1:2,1:2:6.02:75,6,0	0/0:31,0:21:54.62:0,55,649	0/0:20,0:11:22.31:0,22,260	0/0:17,0:17:48.12:0,48,552	0/0:19,0:19:50.31:0,50,497	0/0:18,0:18:21.99:0,22,436	1/1:6,7:11:33.11:418,33,0	0/0:12,0:12:26.98:0,27,307	0/0:26,0:24:47.23:0,47,690	0/0:24,0:24:69.22:0,69,852	0/0:21,0:20:50.42:0,50,498	0/0:16,0:15:37.88:0,38,447	0/0:16,0:15:29.78:0,30,309	0/0:19,0:19:47.51:0,48,483	0/0:21,0:21:53.40:0,53,523	1/1:4,3:6:15.03:174,15,0	0/0:27,0:25:56.07:0,56,526	0/0:19,0:16:48.11:0,48,575	0/0:16,0:16:48.15:0,48,593	0/0:21,0:21:54:0,54,618	0/0:12,0:12:24.61:0,25,263	0/0:17,0:16:36.11:0,36,445	0/0:22,0:21:57.18:0,57,696	0/0:27,0:27:81.25:0,81,1000	1/1:12,6:16:5.13:455,5,0	0/0:27,0:26:78.23:0,78,947	1/1:3,3:6:18.02:209,18,0
chr10	67538410	.	AG	A	742.67	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=8.474;DP=510;FS=1.927;HRun=1;HaplotypeScore=69.7767;InbreedingCoeff=0.9031;MQ=69.05;MQ0=11;MQRankSum=-6.322;QD=13.03;ReadPosRankSum=-2.932;VQSLOD=1.5323;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,2:5:11.79:75,12,0	1/1:2,1:2:5.85:33,6,0	0/0:32,0:22:60.59:0,61,753	0/0:20,0:11:8.11:0,8,304	0/0:17,0:17:47.97:0,48,631	0/0:20,0:20:45.43:0,45,494	0/0:18,0:18:23.81:0,24,508	1/1:11,4:13:38.59:278,39,0	0/0:12,0:12:25.88:0,26,313	0/0:27,0:25:54.78:0,55,855	0/0:23,0:23:69.23:0,69,980	0/0:20,0:20:43.76:0,44,481	0/0:16,0:15:42.13:0,42,548	0/0:18,0:17:33.18:0,33,377	0/0:19,0:19:41.15:0,41,468	0/0:21,0:21:45.71:0,46,513	1/1:5,2:6:15.29:102,15,0	0/0:26,0:25:48.45:0,48,494	0/0:18,0:16:48.13:0,48,651	0/0:16,0:16:48.16:0,48,693	0/0:21,0:21:55.69:0,56,759	0/0:12,0:13:36.01:0,36,406	0/0:18,0:17:42.13:0,42,584	0/0:22,0:21:60.16:0,60,836	0/0:28,0:28:84.26:0,84,1191	1/1:11,7:16:1.06:227,1,0	0/0:28,0:27:84.26:0,84,1180	1/1:7,2:9:26.80:198,27,0
chr10	67538870	.	T	TAC	544.49	PASS	AB=0.863;AC=11;AF=0.220;AN=50;BaseQRankSum=-2.070;DP=598;FS=0.831;HRun=0;HaplotypeScore=125.0229;InbreedingCoeff=-0.2393;MQ=64.95;MQ0=8;MQRankSum=2.266;QD=2.14;ReadPosRankSum=-0.509;VQSLOD=1.7072;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:38:10.21:0,10,47	0/0:6,0:7:1.25:0,1,3	./.	./.	0/0:11,0:19:18.99:0,19,89	0/1:30,0:30:2.49:2,0,319	0/1:27,1:27:33.86:34,0,187	./.	0/0:17,0:18:14.83:0,15,126	0/1:20,1:21:32.93:33,0,55	0/0:15,0:14:17.49:0,17,153	0/0:14,0:14:15.03:0,15,161	0/1:10,10:20:49.59:118,0,50	0/0:8,0:8:5.95:0,6,50	0/1:22,0:25:14.85:15,0,217	0/0:11,0:13:14.65:0,15,116	0/0:22,0:32:2.69:0,3,38	0/0:22,0:22:19.24:0,19,182	0/1:13,1:15:32.49:32,0,67	0/0:19,0:19:11.60:0,12,127	0/1:29,0:29:9.01:9,0,124	0/1:11,13:25:33.91:77,0,34	0/1:6,6:14:9.85:38,0,10	0/1:19,15:36:5.28:305,0,5	0/0:12,0:12:8.69:0,9,96	0/1:6,0:11:12.06:12,0,19	0/0:25,1:27:3.36:0,3,384	0/0:3,0:7:5.68:0,6,28
chr10	67539531	.	G	GC	3944.90	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-3.320;DP=460;FS=12.719;HRun=6;HaplotypeScore=51.1931;InbreedingCoeff=0.9949;MQ=79.72;MQ0=0;MQRankSum=-1.834;QD=33.43;ReadPosRankSum=-0.851;VQSLOD=2.4312;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,34:37:96.31:1207,96,0	1/1:1,5:6:15.05:189,15,0	0/0:20,0:20:54.10:0,54,537	0/0:23,0:22:42.06:0,42,416	1/1:0,11:11:33.11:415,33,0	0/0:23,0:23:57.12:0,57,582	0/0:26,0:26:72.16:0,72,734	1/1:2,17:19:51.15:627,51,0	0/0:12,0:12:33.08:0,33,337	0/0:15,0:15:39.08:0,39,393	0/0:9,0:9:24.05:0,24,245	0/0:16,0:16:39.08:0,39,398	0/0:8,0:8:21.04:0,21,214	0/0:13,0:13:33.07:0,33,336	0/0:15,0:15:42.08:0,42,422	0/0:14,0:14:39.09:0,39,398	1/1:1,22:23:57.18:717,57,0	0/0:19,0:19:51.11:0,51,520	0/0:20,0:20:54.12:0,54,551	0/0:12,0:12:33.07:0,33,337	0/0:21,0:21:54.10:0,54,543	0/0:16,0:16:39.08:0,39,398	0/0:14,0:14:36.08:0,36,367	0/0:14,0:14:39.08:0,39,398	0/0:21,0:21:60.14:0,60,612	1/1:1,14:15:42.13:526,42,0	0/0:11,0:10:33.07:0,33,336	1/1:0,7:7:21.07:264,21,0
chr10	67539717	.	G	GC	2852.14	PASS	AB=0.550;AC=13;AF=0.232;AN=56;BaseQRankSum=10.987;DP=414;FS=0.482;HRun=2;HaplotypeScore=64.8558;InbreedingCoeff=0.8923;MQ=85.30;MQ0=0;MQRankSum=-4.098;QD=31.34;ReadPosRankSum=-1.974;VQSLOD=2.7148;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,33:35:84.19:1151,84,0	1/1:0,3:3:9.03:130,9,0	0/0:13,0:13:36.10:0,36,433	0/0:27,0:27:48.95:0,49,800	1/1:0,9:9:18.05:241,18,0	0/0:15,0:15:45.14:0,45,551	0/0:26,0:26:69.20:0,69,842	1/1:3,14:17:42.14:604,42,0	0/0:19,0:19:54.17:0,54,669	0/0:15,0:15:39.12:0,39,482	0/0:7,0:7:15.05:0,15,186	0/0:19,0:19:51.16:0,51,632	0/0:13,0:13:33.10:0,33,409	0/0:18,0:18:51.16:0,51,625	0/0:11,0:11:30.09:0,30,371	0/0:13,0:13:36.07:0,36,429	1/1:1,12:13:30.10:432,30,0	0/0:10,0:10:30.09:0,30,372	0/0:13,0:13:33.06:0,33,390	0/0:7,0:7:15:0,15,186	0/0:23,0:23:63.18:0,63,767	0/0:12,0:12:30.09:0,30,371	0/0:7,0:7:12.04:0,12,149	0/0:20,0:20:54.11:0,54,627	0/0:18,0:18:45.09:0,45,527	0/1:2,9:11:4.12:363,0,4	0/0:17,0:17:51.16:0,51,631	1/1:0,3:3:9.03:116,9,0
chr10	67539760	.	ACCCT	A	1056.19	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=8.680;DP=306;FS=30.600;HRun=0;HaplotypeScore=70.1172;InbreedingCoeff=0.7800;MQ=72.16;MQ0=0;MQRankSum=-5.671;QD=17.60;ReadPosRankSum=-2.885;VQSLOD=0.9538;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:15,4:19:32.40:360,32,0	1/1:0,2:2:6.02:113,6,0	0/0:9,0:9:20.70:0,21,259	0/0:14,0:14:29.14:0,29,508	1/1:2,0:7:9.02:97,9,0	0/0:17,0:17:39.06:0,39,753	0/0:23,0:23:54.08:0,54,891	1/1:9,1:10:8.63:82,9,0	0/0:14,0:14:39.13:0,39,878	0/0:11,0:11:21.02:0,21,356	0/0:8,0:8:14.99:0,15,225	0/0:16,0:16:42.56:0,43,905	0/0:6,0:6:17.75:0,18,221	0/0:21,0:21:57.18:0,57,1322	0/0:11,0:11:29.10:0,29,622	0/0:11,0:11:30.10:0,30,680	1/1:6,7:13:36:493,36,0	0/0:8,0:8:21.01:0,21,400	0/0:8,0:8:17.16:0,17,275	0/0:5,0:5:12.04:0,12,232	0/0:17,0:17:27.92:0,28,465	0/0:4,0:4:8.93:0,9,68	0/0:6,0:6:9.02:0,9,167	0/0:14,0:14:36.58:0,37,777	0/0:10,0:10:24.07:0,24,535	0/1:6,0:6:59:59,0,63	0/0:13,0:13:36.06:0,36,813	1/1:3,0:3:3:25,3,0
chr10	67539761	.	CCCT	C	841.05	PASS	AB=0.750;AC=13;AF=0.232;AN=56;BaseQRankSum=8.933;DP=303;FS=28.851;HRun=0;HaplotypeScore=64.5198;InbreedingCoeff=0.7925;MQ=72.33;MQ0=0;MQRankSum=-6.130;QD=14.50;ReadPosRankSum=-2.874;VQSLOD=1.1152;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:17,1:18:32.13:261,32,0	1/1:2,0:2:6.02:64,6,0	0/0:9,0:9:19.57:0,20,219	0/0:14,0:14:28.86:0,29,418	1/1:7,0:7:8.99:79,9,0	0/0:17,0:17:39.03:0,39,609	0/0:23,0:23:54.08:0,54,782	1/1:9,1:10:17.67:159,18,0	0/0:14,0:14:39.12:0,39,704	0/0:10,0:10:21.02:0,21,305	0/0:8,0:8:14.91:0,15,186	0/0:16,0:16:42.55:0,43,743	0/0:7,0:7:20.64:0,21,241	0/0:21,0:21:57.15:0,57,1072	0/0:11,0:11:29.12:0,29,513	0/0:10,0:10:30.07:0,30,570	1/1:12,0:12:35.66:321,36,0	0/0:8,0:8:21.01:0,21,333	0/0:8,0:8:17.16:0,17,250	0/0:5,0:5:12.03:0,12,180	0/0:16,0:16:27.92:0,28,389	0/0:4,0:4:9:0,9,85	0/0:6,0:6:9:0,9,141	0/0:14,0:14:36.58:0,37,638	0/0:11,0:11:27.08:0,27,488	0/1:4,2:6:46.80:108,0,47	0/0:13,0:13:35.33:0,35,653	1/1:1,2:3:3:25,3,0
chr10	67539762	.	CCT	C	714.09	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=8.990;DP=303;FS=26.585;HRun=0;HaplotypeScore=59.9056;InbreedingCoeff=0.7830;MQ=73.76;MQ0=0;MQRankSum=-4.151;QD=12.31;ReadPosRankSum=-2.647;VQSLOD=0.8685;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:17,1:18:32.10:238,32,0	1/1:2,0:2:6:52,6,0	0/0:9,1:10:19.03:0,19,200	0/0:14,0:14:16.61:0,17,315	1/1:7,0:7:8.87:61,9,0	0/0:17,0:17:38.75:0,39,476	0/0:21,0:21:53.72:0,54,611	1/1:9,1:10:17.80:136,18,0	0/0:15,0:15:41.84:0,42,554	0/0:9,0:9:21.01:0,21,257	0/0:8,0:8:14.70:0,15,154	0/0:16,0:16:42.02:0,42,594	0/0:7,0:7:20.18:0,20,203	0/0:21,0:21:57.15:0,57,859	0/0:11,0:11:29.11:0,29,412	0/0:10,0:10:25:0,25,427	1/1:10,2:12:35.87:293,36,0	0/0:8,0:8:21.01:0,21,268	0/0:8,0:8:17.16:0,17,195	0/0:5,0:5:11.84:0,12,127	0/0:16,0:16:27.90:0,28,307	0/0:3,0:3:8.93:0,9,68	0/0:7,0:7:10.81:0,11,118	0/0:14,0:14:36.10:0,36,506	0/0:11,0:11:27.08:0,27,391	0/1:6,0:6:34.51:85,0,35	0/0:14,0:14:9.20:0,9,479	1/1:3,0:3:3:25,3,0
chr10	67540243	.	CTG	C	333.02	PASS	AB=0.550;AC=1;AF=0.018;AN=56;BaseQRankSum=2.484;DP=576;FS=6.851;HRun=0;HaplotypeScore=86.9126;InbreedingCoeff=-0.0204;MQ=94.28;MQ0=0;MQRankSum=-0.406;QD=30.27;ReadPosRankSum=2.018;VQSLOD=5.6438;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,105,2061	0/0:11,0:11:33.11:0,33,656	0/0:25,0:25:65.63:0,66,1184	0/0:30,0:30:74.41:0,74,1399	0/0:13,0:13:29.84:0,30,594	0/0:21,0:21:57.02:0,57,1155	0/0:29,0:29:81.28:0,81,1573	0/0:27,0:27:81.27:0,81,1562	0/0:22,0:22:63.22:0,63,1267	0/0:17,0:17:51.17:0,51,1011	0/0:20,0:20:48.07:0,48,879	0/0:21,0:21:60.21:0,60,1190	0/0:18,0:18:54.19:0,54,1071	0/0:10,0:10:30.10:0,30,609	0/0:20,0:20:60.21:0,60,1219	0/0:9,0:9:27.09:0,27,548	0/0:42,0:42:99:0,114,2311	0/0:28,0:28:78.27:0,78,1571	0/0:11,0:11:30.10:0,30,581	0/0:15,0:15:42.13:0,42,772	0/0:30,0:30:87.28:0,87,1674	0/0:14,0:14:39.09:0,39,725	0/0:10,0:10:30.10:0,30,568	0/0:32,0:32:93.32:0,93,1820	0/1:2,9:11:51.85:407,0,52	0/0:23,0:21:63.20:0,63,1230	0/0:28,0:28:81.28:0,81,1643	0/0:3,0:3:9.03:0,9,183
chr10	67540587	.	TGG	T	2591.59	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=7.640;DP=542;FS=17.459;HRun=11;HaplotypeScore=73.8322;InbreedingCoeff=0.9690;MQ=70.07;MQ0=5;MQRankSum=-0.508;QD=21.07;ReadPosRankSum=4.912;VQSLOD=1.1569;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,31:35:68.90:714,69,0	1/1:0,6:5:9.02:96,9,0	0/0:12,0:12:21.03:0,21,286	0/0:14,0:15:20.28:0,20,222	0/0:22,0:22:29.12:0,29,376	0/0:15,0:15:21.06:0,21,300	0/0:24,0:25:47.35:0,47,688	1/1:5,23:28:69.10:717,69,0	0/0:22,0:23:44.64:0,45,646	0/0:12,0:12:12.03:0,12,164	0/0:17,0:18:29.55:0,30,358	0/0:16,0:17:32.46:0,32,445	0/0:14,0:15:26.41:0,26,313	0/0:18,0:18:36.07:0,36,482	0/0:21,0:22:44.59:0,45,571	0/0:20,0:21:38.60:0,39,541	1/1:1,22:23:45.10:479,45,0	0/0:14,0:17:32.08:0,32,430	0/0:16,0:16:23.48:0,23,281	0/0:15,0:17:17.55:0,18,236	0/0:42,0:44:68.04:0,68,899	0/0:15,0:16:23.53:0,24,286	0/0:9,0:10:14.54:0,15,191	0/0:24,0:26:48.12:0,48,694	0/0:6,0:6:18.04:0,18,237	1/1:4,19:23:34.06:578,34,0	0/0:25,0:27:58.85:0,59,794	1/1:2,6:8:18.04:192,18,0
chr10	67540975	.	AAAAG	A	920.58	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=4.282;DP=599;FS=1.796;HRun=0;HaplotypeScore=109.7540;InbreedingCoeff=0.2942;MQ=70.83;MQ0=10;MQRankSum=-0.664;QD=10.34;ReadPosRankSum=-6.318;VQSLOD=0.8470;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:9.28:0,9,267	0/0:9,0:9:22.73:0,23,175	0/0:43,0:26:13.73:0,14,644	0/0:30,0:19:3.92:0,4,261	1/1:16,11:27:69.02:870,69,0	0/0:26,0:26:75.16:0,75,1608	0/0:14,0:14:42.13:0,42,870	0/1:29,0:28:84.25:84,0,326	0/0:27,0:27:81.23:0,81,1715	0/0:23,0:23:69.19:0,69,1313	0/0:18,0:18:45.07:0,45,985	0/0:17,0:17:51.13:0,51,1004	0/0:12,0:12:35.91:0,36,652	0/0:18,0:18:51.09:0,51,1046	0/0:20,0:20:57.13:0,57,1127	0/0:23,0:23:69.19:0,69,1448	0/0:23,0:22:11.49:0,11,343	0/0:16,0:15:42.14:0,42,879	0/0:19,0:19:47.98:0,48,928	0/0:27,0:27:78.19:0,78,1539	0/0:13,0:13:39.13:0,39,898	0/0:14,0:14:42.11:0,42,819	0/0:25,0:25:43.94:0,44,1259	0/0:19,0:19:53.79:0,54,1140	0/0:19,0:19:54.14:0,54,1179	0/1:14,0:14:66.98:67,0,154	0/0:25,0:25:75.17:0,75,1472	0/1:19,0:17:22.19:22,0,264
chr10	67540978	.	AG	A	2170.30	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=10.746;DP=600;FS=0.362;HRun=1;HaplotypeScore=71.6952;InbreedingCoeff=0.9832;MQ=70.83;MQ0=10;MQRankSum=-2.411;QD=14.47;ReadPosRankSum=-6.009;VQSLOD=0.6911;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:28:38.04:242,38,0	1/1:9,0:9:22.04:181,22,0	0/0:42,1:26:26.05:0,26,417	0/0:28,1:18:6.94:0,7,169	1/1:26,0:26:70.97:555,71,0	0/0:25,0:25:71.52:0,72,794	0/0:15,0:15:45.06:0,45,475	1/1:27,2:28:59.13:450,59,0	0/0:27,0:27:81.17:0,81,889	0/0:24,0:24:59.83:0,60,692	0/0:16,0:16:45.02:0,45,495	0/0:18,0:18:54.02:0,54,538	0/0:12,0:12:35.89:0,36,363	0/0:18,0:18:54.05:0,54,564	0/0:19,0:19:57.10:0,57,614	0/0:23,0:23:69.13:0,69,755	1/1:21,2:22:49.42:338,49,0	0/0:17,0:16:44.65:0,45,433	0/0:19,0:19:47.65:0,48,499	0/0:26,0:26:77.99:0,78,801	0/0:14,0:14:42.06:0,42,455	0/0:14,0:14:37.87:0,38,406	0/0:25,0:25:44.34:0,44,644	0/0:19,0:19:53.85:0,54,579	0/0:21,0:21:63.10:0,63,674	1/1:16,0:16:44.14:321,44,0	0/0:26,0:26:78.09:0,78,817	1/1:19,0:17:42.46:281,42,0
chr10	67543327	.	T	TCACACACA	3801.50	PASS	AB=0.917;AC=14;AF=0.250;AN=56;BaseQRankSum=4.675;DP=692;FS=4.659;HRun=0;HaplotypeScore=187.9397;InbreedingCoeff=0.7270;MQ=63.79;MQ0=10;MQRankSum=-6.682;QD=19.40;ReadPosRankSum=-4.666;VQSLOD=2.0136;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:22,20:46:8.81:212,9,0	1/1:4,1:7:11.71:221,12,0	0/0:50,0:25:3.01:0,3,61	0/1:42,0:31:20.97:21,0,243	1/1:15,1:16:18.04:364,18,0	0/0:18,0:19:39.07:0,39,854	0/0:23,0:24:32.45:0,32,783	1/1:30,0:30:48.78:872,49,0	0/0:18,0:20:22.39:0,22,615	0/0:22,0:23:55.15:0,55,1128	0/0:19,0:19:42.12:0,42,966	0/0:27,0:27:36.60:0,37,991	0/0:21,0:21:49.41:0,49,1055	0/0:20,0:18:24.06:0,24,553	0/0:24,0:24:54.11:0,54,1094	0/0:18,0:18:44.50:0,44,1028	0/1:24,4:30:14.76:796,0,15	0/0:21,0:21:10.19:0,10,1112	0/0:17,0:16:18.03:0,18,410	0/0:23,0:23:39.07:0,39,780	0/0:54,0:61:99:0,113,2321	0/0:15,0:15:19.30:0,19,555	0/0:11,0:10:20.81:0,21,431	0/0:41,0:41:84.19:0,84,2360	0/0:16,0:16:11.47:0,11,553	1/1:5,5:20:45.84:1111,46,0	0/0:26,0:26:31.76:0,32,1180	1/1:4,1:4:6.02:204,6,0
chr10	67543361	.	T	TCA	1218.49	PASS	AB=0.574;AC=12;AF=0.214;AN=56;BaseQRankSum=-1.075;DP=773;FS=7.046;HRun=0;HaplotypeScore=121.0095;InbreedingCoeff=0.7454;MQ=54.10;MQ0=16;MQRankSum=-1.255;QD=7.96;ReadPosRankSum=-3.013;VQSLOD=2.2031;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:28,7:35:14.55:187,15,0	1/1:8,0:8:10.51:101,11,0	0/0:51,0:15:32.33:0,32,388	0/0:61,0:16:20.10:0,20,219	0/1:6,17:24:31.08:43,0,31	0/0:22,0:22:47.34:0,47,535	0/0:30,0:30:60.10:0,60,710	1/1:15,12:27:36.02:422,36,0	0/0:25,0:25:59.97:0,60,666	0/0:25,0:25:57.02:0,57,644	0/0:24,0:24:51.15:0,51,612	0/0:28,0:30:60.02:0,60,671	0/0:22,0:22:52.32:0,52,599	0/0:21,0:19:47.54:0,48,532	0/0:26,0:26:60.16:0,60,712	0/0:18,0:18:51.12:0,51,591	0/1:8,21:30:20.03:64,0,20	0/0:23,0:23:57.07:0,57,611	0/0:22,0:20:45.05:0,45,516	0/0:27,0:27:71.98:0,72,761	0/0:62,0:60:99:0,124,1415	0/0:20,0:19:48.10:0,48,539	0/0:10,0:10:18.04:0,18,208	0/0:41,0:41:99:0,102,1125	0/0:24,0:23:63.12:0,63,700	1/1:21,2:23:15.91:481,16,0	0/0:34,0:34:87.22:0,87,1018	1/1:1,5:6:6.02:94,6,0
chr10	67543649	.	AAAAG	A	3690.68	PASS	AC=28;AF=0.560;AN=50;BaseQRankSum=-1.806;DP=441;FS=0.641;HRun=0;HaplotypeScore=71.1278;InbreedingCoeff=0.8159;MQ=58.20;MQ0=6;MQRankSum=1.566;QD=15.13;ReadPosRankSum=-1.230;VQSLOD=2.8375;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:15:18.03:0,18,299	0/0:10,0:10:5.05:0,5,63	./.	./.	0/0:12,0:12:24.03:0,24,357	1/1:6,10:16:15.05:232,15,0	1/1:12,2:14:21:274,21,0	0/0:13,0:10:2.98:0,3,21	1/1:8,7:14:12.04:185,12,0	1/1:14,9:24:33.05:405,33,0	1/1:11,19:30:50.92:652,51,0	1/1:7,8:15:12.04:184,12,0	0/0:7,0:7:18.05:0,18,377	1/1:5,5:10:15.01:205,15,0	1/1:7,7:14:2.22:173,2,0	1/1:5,6:11:9.03:139,9,0	0/0:24,0:24:33.09:0,33,597	1/1:7,9:16:10.73:156,11,0	./.	1/1:14,9:23:21.07:324,21,0	1/1:3,4:7:12:159,12,0	0/0:11,0:11:24.08:0,24,520	0/0:10,0:17:6.49:0,6,106	0/0:10,0:21:9.01:0,9,129	1/1:12,8:20:6.02:93,6,0	0/0:9,0:17:23.23:0,23,236	1/1:14,15:29:33.11:510,33,0	0/0:4,0:9:3.01:0,3,52
chr10	67543694	.	A	AAAGG	889.97	PASS	AB=1.000;AC=10;AF=0.179;AN=56;BaseQRankSum=1.122;DP=501;FS=11.549;HRun=0;HaplotypeScore=90.9234;InbreedingCoeff=0.3975;MQ=59.16;MQ0=8;MQRankSum=1.085;QD=6.95;ReadPosRankSum=0.645;VQSLOD=1.2288;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:4,22:26:9.03:189,9,0	1/1:0,7:7:14.89:188,15,0	0/0:12,0:4:11.99:0,12,113	0/0:17,0:7:7.98:0,8,81	0/0:23,0:23:54.01:0,54,538	0/0:24,0:24:56.93:0,57,529	0/0:14,0:14:33.03:0,33,354	0/0:22,0:20:42.01:0,42,389	0/0:16,0:16:39.02:0,39,383	0/0:22,0:23:56.93:0,57,556	0/0:35,0:35:81.02:0,81,773	0/0:14,0:14:26.24:0,26,250	0/0:14,0:14:39.04:0,39,466	0/0:12,0:12:32.77:0,33,317	0/0:16,0:16:3.78:0,4,280	0/0:17,0:17:42.03:0,42,398	1/1:6,18:26:3.07:436,3,0	0/0:16,0:16:26.95:0,27,256	0/0:9,0:8:20.95:0,21,177	0/0:25,0:25:68.95:0,69,663	0/0:7,0:7:20.97:0,21,220	0/0:16,0:16:45.07:0,45,574	0/1:11,0:11:61.92:75,0,62	0/1:24,0:24:46.04:46,0,248	0/0:15,0:15:27.01:0,27,258	0/1:22,0:22:89.42:89,0,334	0/0:26,0:26:66.08:0,66,691	0/1:11,0:11:14.22:14,0,104
chr10	67544837	.	AT	A	958.03	PASS	AB=1.000;AC=8;AF=0.143;AN=56;BaseQRankSum=1.230;DP=307;FS=2.154;HRun=5;HaplotypeScore=38.9844;InbreedingCoeff=0.4824;MQ=63.94;MQ0=18;MQRankSum=1.766;QD=11.01;ReadPosRankSum=1.661;VQSLOD=0.3967;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,16:15:6:405,6,0	1/1:0,3:3:6.02:68,6,0	0/0:14,0:6:13.57:0,14,135	0/0:18,0:8:12.78:0,13,107	0/0:13,0:12:30.81:0,31,125	0/0:17,0:16:36.56:0,37,469	0/0:6,0:6:12:0,12,140	0/1:31,0:23:19.82:20,0,108	0/0:3,0:3:9.03:0,9,123	0/0:11,0:11:30.08:0,30,392	0/0:11,0:11:33.10:0,33,432	0/0:4,0:4:12.04:0,12,153	0/0:7,0:7:21.07:0,21,287	0/0:6,0:6:18.02:0,18,222	0/0:7,0:7:21:0,21,264	0/0:1,0:1:3.01:0,3,41	1/1:4,24:27:4.86:587,5,0	0/0:25,0:23:60.14:0,60,777	0/0:19,0:18:54.15:0,54,717	0/0:6,0:5:12.03:0,12,148	0/0:7,0:7:21.04:0,21,254	0/0:1,0:1:3.01:0,3,41	0/0:2,0:2:6.01:0,6,65	0/0:5,0:5:15.05:0,15,205	0/0:10,0:10:29.96:0,30,364	0/1:8,0:7:2.69:3,0,29	0/0:9,0:8:24.07:0,24,311	0/0:17,1:17:10.23:0,10,143
chr10	67545150	.	GTTTGTTT	G	2042	PASS	AB=0.963;AC=9;AF=0.167;AN=54;BaseQRankSum=6.428;DP=437;FS=1.348;HRun=0;HaplotypeScore=86.5095;InbreedingCoeff=0.7249;MQ=61.23;MQ0=8;MQRankSum=-3.749;QD=24.31;ReadPosRankSum=0.794;VQSLOD=3.3641;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:15,1:15:23.91:415,24,0	./.	0/0:31,0:16:21.34:0,21,360	0/0:44,0:15:2.49:0,2,251	0/0:15,0:15:38.49:0,38,924	0/0:14,0:13:30.10:0,30,916	0/0:19,0:19:45.12:0,45,1299	1/1:9,10:19:30.02:487,30,0	0/0:5,0:5:3.01:0,3,105	0/0:24,0:23:40.37:0,40,1231	0/0:10,0:10:26.68:0,27,804	0/0:13,0:12:15.05:0,15,494	0/0:14,0:13:21.07:0,21,594	0/0:9,0:9:18.06:0,18,583	0/0:11,0:11:24.05:0,24,670	0/0:12,0:10:21.07:0,21,636	0/1:25,1:25:23.14:367,0,23	0/0:18,0:17:39.13:0,39,1195	0/0:17,0:16:21.07:0,21,640	0/0:10,0:10:21.07:0,21,655	0/0:12,0:12:18.06:0,18,461	0/0:3,0:2:6.02:0,6,198	0/0:5,0:4:9.03:0,9,253	0/0:30,0:29:50.20:0,50,1430	0/0:10,0:9:17.85:0,18,431	1/1:2,15:17:23.45:782,23,0	0/0:24,0:22:51.14:0,51,1433	1/1:6,0:6:9.03:147,9,0
chr10	67545166	.	TTG	T	974.91	PASS	AB=0.935;AC=8;AF=0.143;AN=56;BaseQRankSum=10.924;DP=514;FS=39.593;HRun=0;HaplotypeScore=62.9783;InbreedingCoeff=0.3166;MQ=46.53;MQ0=33;MQRankSum=-5.360;QD=9.28;ReadPosRankSum=-2.412;VQSLOD=1.3268;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:20,3:21:80.09:147,0,80	0/0:3,0:3:3.01:0,3,45	0/0:53,0:9:24.30:0,24,267	0/0:64,0:12:10.51:0,11,182	0/0:19,0:19:40.34:0,40,600	0/0:18,0:17:23.70:0,24,558	0/0:18,0:17:50.27:0,50,686	1/1:13,0:12:27.68:262,28,0	0/0:5,0:5:8.91:0,9,88	0/0:22,0:21:29.93:0,30,735	0/0:15,0:14:27.12:0,27,441	0/0:16,0:15:26.72:0,27,389	0/0:11,0:9:6.46:0,6,301	0/0:7,0:7:21.07:0,21,349	0/0:9,0:9:23.65:0,24,330	0/0:12,0:10:18.22:0,18,308	0/1:25,5:29:98.11:307,0,98	0/0:18,0:16:42.07:0,42,620	0/0:18,0:14:37.14:0,37,552	0/0:12,0:12:33.11:0,33,528	0/0:10,0:10:15.96:0,16,404	0/0:8,0:6:11.53:0,12,159	0/1:9,0:8:18.15:18,0,159	0/0:29,0:26:63.13:0,63,905	0/0:15,0:13:7.23:0,7,379	0/1:25,0:25:99:291,0,134	0/0:27,0:25:34.29:0,34,731	1/1:0,5:5:8.96:92,9,0
chr10	67545760	.	A	ATGATGT	5332.43	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-5.716;DP=964;FS=3.409;HRun=0;HaplotypeScore=194.3615;InbreedingCoeff=0.9249;MQ=60.79;MQ0=1;MQRankSum=-8.128;QD=34.18;ReadPosRankSum=-3.156;VQSLOD=3.7612;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,25:39:41.63:1265,42,0	1/1:2,10:13:24.08:726,24,0	0/0:42,0:38:42.41:0,42,747	0/0:33,0:30:39.08:0,39,700	0/0:26,0:26:57.16:0,57,1094	0/0:25,0:25:54.19:0,54,1108	0/0:39,0:39:87.20:0,87,1690	1/1:41,0:41:81.14:1450,81,0	0/0:51,0:51:99:0,114,2129	0/0:41,0:41:78.23:0,78,1449	0/0:19,0:19:45.11:0,45,819	0/0:37,0:37:90.24:0,90,1717	0/0:55,0:55:99:0,138,2799	0/0:46,0:46:99:0,102,1946	0/0:51,0:51:99:0,138,2861	0/0:51,0:51:99:0,132,2611	1/1:9,23:35:17.89:500,18,0	0/0:20,0:20:3.77:0,4,515	0/0:17,0:17:29.99:0,30,467	0/0:34,0:34:93.30:0,93,1853	0/0:62,0:62:99:0,144,2710	0/0:26,0:26:54.17:0,54,1066	0/0:15,0:15:39.13:0,39,823	0/0:56,0:56:99:0,124,2355	0/0:21,0:20:42.13:0,42,856	1/1:6,20:27:12.57:1372,13,0	0/0:41,0:41:87.25:0,87,1678	1/1:1,0:1:2.97:20,3,0
chr10	67545775	.	A	ATGT	1763.17	PASS	AB=0.978;AC=7;AF=0.125;AN=56;BaseQRankSum=8.599;DP=916;FS=8.430;HRun=0;HaplotypeScore=141.1473;InbreedingCoeff=0.2081;MQ=61.28;MQ0=1;MQRankSum=-8.779;QD=11.91;ReadPosRankSum=-0.484;VQSLOD=2.6112;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:38,0:38:99:395,0,182	1/1:9,0:9:24.05:273,24,0	0/0:37,0:34:81.55:0,82,1327	0/0:30,0:27:70.01:0,70,919	0/0:24,0:24:66.19:0,66,1060	0/0:22,0:22:60.19:0,60,981	0/0:39,0:39:99:0,111,1773	0/1:29,4:33:99:599,0,286	0/0:45,0:45:99:0,126,1974	0/0:35,0:35:99:0,105,1660	0/0:20,0:20:60.15:0,60,911	0/0:32,0:32:96.27:0,96,1528	0/0:58,0:58:99:0,163,2678	0/0:43,0:43:99:0,123,1969	0/0:51,0:51:99:0,153,2525	0/0:54,0:54:99:0,156,2559	0/1:39,0:39:99:158,0,321	0/0:20,0:20:38.13:0,38,655	0/0:17,0:17:48.11:0,48,715	0/0:34,0:34:99:0,102,1720	0/0:56,0:56:99:0,162,2569	0/0:25,0:25:69.19:0,69,1079	0/0:18,0:18:51.16:0,51,836	0/0:53,0:53:99:0,137,2046	0/0:19,0:18:51.17:0,51,851	0/1:23,0:23:99:467,0,205	0/0:36,0:36:99:0,105,1694	0/1:6,0:6:1.95:2,0,158
chr10	67546396	.	AT	A	2256.12	PASS	AB=0.580;AC=13;AF=0.232;AN=56;BaseQRankSum=9.094;DP=519;FS=3.037;HRun=11;HaplotypeScore=55.0220;InbreedingCoeff=0.8489;MQ=69.52;MQ0=0;MQRankSum=-0.283;QD=15.78;ReadPosRankSum=1.203;VQSLOD=4.4606;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,35:40:98.88:813,99,0	1/1:0,3:4:11.03:80,11,0	0/0:12,1:11:13.63:0,14,156	0/0:9,0:8:13.14:0,13,110	1/1:6,17:23:38.91:318,39,0	0/0:22,0:23:59.98:0,60,622	0/0:18,0:18:42.11:0,42,448	0/1:8,21:29:27.07:424,0,27	0/0:14,0:15:32.92:0,33,334	0/0:30,0:31:68.96:0,69,700	0/0:17,0:17:36.40:0,36,366	0/0:17,0:17:48.12:0,48,511	0/0:11,0:11:33.06:0,33,341	0/0:21,0:21:48.10:0,48,498	0/0:14,2:16:11.45:0,11,327	0/0:21,1:22:29.47:0,29,511	1/1:0,18:18:47.94:394,48,0	0/0:21,0:21:54.10:0,54,563	0/0:21,0:22:47.96:0,48,481	0/0:26,0:26:66.17:0,66,704	0/0:8,0:8:12.03:0,12,128	0/0:16,0:17:44.95:0,45,462	0/0:11,0:12:29.91:0,30,300	0/0:14,0:14:36.09:0,36,384	0/0:20,1:22:32.32:0,32,528	1/1:6,18:24:18.92:362,19,0	0/0:21,0:21:56.94:0,57,570	1/1:2,3:5:5.99:49,6,0
chr10	67546556	.	AGT	A	452.04	PASS	AB=0.898;AC=12;AF=0.231;AN=52;BaseQRankSum=4.551;DP=531;FS=0.732;HRun=0;HaplotypeScore=74.5611;InbreedingCoeff=0.1324;MQ=55.53;MQ0=7;MQRankSum=1.474;QD=2.61;ReadPosRankSum=0.190;VQSLOD=1.8339;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:38:12.97:0,13,90	0/0:4,0:4:3:0,3,26	./.	./.	0/0:18,0:22:8.49:0,8,49	0/0:22,0:22:0:0,0,414	0/0:17,0:18:6.88:0,7,231	1/1:24,5:29:9.02:100,9,0	0/0:20,0:20:27.09:0,27,404	0/0:14,0:21:30.05:0,30,364	0/1:8,1:9:15.47:15,0,210	0/0:24,0:24:33.10:0,33,476	0/1:13,2:15:19.06:19,0,290	0/0:18,1:19:5.57:0,6,478	0/1:13,2:15:0.43:0,0,398	0/1:17,3:20:58.40:58,0,435	0/0:20,0:26:9.46:0,9,76	0/0:23,0:23:45.14:0,45,652	0/0:25,0:25:18.06:0,18,266	0/1:13,3:16:39.95:40,0,288	0/1:31,1:33:0.13:0,0,605	0/0:12,0:11:12.03:0,12,161	0/0:13,0:13:15.05:0,15,228	0/0:28,0:28:57.10:0,57,770	0/1:8,2:10:12.44:12,0,250	1/1:11,12:23:32.90:338,33,0	0/0:11,0:11:24.08:0,24,359	0/1:3,0:3:3.63:9,0,4
chr10	67546810	.	C	CT	2362.12	PASS	AB=0.892;AC=17;AF=0.304;AN=56;BaseQRankSum=-6.516;DP=372;FS=1.618;HRun=10;HaplotypeScore=37.1431;InbreedingCoeff=0.6893;MQ=69.12;MQ0=4;MQRankSum=0.964;QD=15.64;ReadPosRankSum=-0.050;VQSLOD=3.1783;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,18:21:42.11:448,42,0	1/1:1,3:4:9.02:96,9,0	0/0:8,0:9:5:0,5,30	0/1:7,1:6:23:23,0,40	1/1:5,13:17:36.07:375,36,0	0/0:26,0:27:55.96:0,56,449	0/0:3,0:3:8.99:0,9,74	1/1:12,17:29:23.42:425,23,0	0/0:15,0:15:29.95:0,30,246	0/0:16,0:16:35.94:0,36,296	0/1:6,1:7:11.01:11,0,127	0/0:9,0:9:20.95:0,21,170	0/0:3,0:3:5.97:0,6,46	0/1:7,1:9:3.86:4,0,128	0/0:11,0:11:23.97:0,24,197	0/0:10,0:10:14.98:0,15,123	1/1:8,20:26:65.17:662,65,0	0/0:23,1:24:22.44:0,22,387	0/0:33,0:32:68.15:0,68,543	0/0:14,0:13:22.77:0,23,177	0/0:6,0:6:11.98:0,12,99	0/0:4,0:4:11.86:0,12,89	0/0:7,0:7:20.95:0,21,168	0/0:5,0:5:8.95:0,9,68	0/0:15,0:15:38.95:0,39,320	1/1:3,16:19:39.10:416,39,0	0/0:10,0:10:29.96:0,30,244	1/1:2,4:5:9.02:96,9,0
chr10	67547162	.	AG	A	3191.20	PASS	AB=0.657;AC=11;AF=0.196;AN=56;BaseQRankSum=13.820;DP=506;FS=27.394;HRun=3;HaplotypeScore=89.8335;InbreedingCoeff=0.8498;MQ=70.74;MQ0=3;MQRankSum=-7.543;QD=25.33;ReadPosRankSum=1.929;VQSLOD=1.9675;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,32:33:53.91:621,54,0	1/1:1,14:15:39.12:480,39,0	0/0:16,0:13:34.31:0,34,410	0/0:23,0:17:33.58:0,34,480	0/0:19,0:19:53.98:0,54,808	0/0:22,0:22:66.22:0,66,985	0/0:27,0:27:81.27:0,81,1212	1/1:3,19:22:54.17:658,54,0	0/0:13,0:13:39.13:0,39,579	0/0:14,0:14:39.13:0,39,583	0/0:9,0:9:26.92:0,27,370	0/0:21,0:21:63.21:0,63,937	0/0:18,0:18:54.18:0,54,803	0/0:12,0:12:36.10:0,36,515	0/0:19,0:19:57.19:0,57,853	0/0:11,0:11:33.11:0,33,495	1/1:3,23:26:63.16:777,63,0	0/0:25,0:25:72.23:0,72,1050	0/0:18,0:18:54.16:0,54,772	0/0:15,0:15:45.15:0,45,672	0/0:36,0:36:99:0,99,1484	0/0:2,0:2:3.01:0,3,45	0/0:9,0:9:24.08:0,24,360	0/0:16,0:16:48.16:0,48,719	0/0:14,0:14:42.14:0,42,627	0/1:11,12:23:68.75:613,0,69	0/0:21,0:21:63.21:0,63,939	1/1:0,6:6:18.06:220,18,0
chr10	67547167	.	GA	G	3665.18	PASS	AB=0.636;AC=11;AF=0.196;AN=56;BaseQRankSum=13.716;DP=503;FS=25.941;HRun=1;HaplotypeScore=88.0785;InbreedingCoeff=0.8634;MQ=71.12;MQ0=4;MQRankSum=-7.386;QD=31.06;ReadPosRankSum=1.889;VQSLOD=2.0292;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,31:32:54.15:666,54,0	1/1:0,14:14:39.12:516,39,0	0/0:18,0:14:34.35:0,34,457	0/0:27,0:21:45.60:0,46,681	0/0:19,0:19:54.15:0,54,834	0/0:22,0:22:66.23:0,66,1055	0/0:28,0:28:84.25:0,84,1292	1/1:0,20:20:57.19:756,57,0	0/0:14,0:14:42.14:0,42,667	0/0:12,0:12:33.11:0,33,521	0/0:10,0:10:27.09:0,27,431	0/0:23,0:23:69.24:0,69,1098	0/0:19,0:19:57.18:0,57,886	0/0:12,0:12:36.12:0,36,574	0/0:20,0:20:60.20:0,60,959	0/0:12,0:12:36.12:0,36,574	1/1:1,23:24:63.20:837,63,0	0/0:25,0:25:69.24:0,69,1103	0/0:15,0:15:45.15:0,45,720	0/0:14,0:14:42.14:0,42,662	0/0:33,0:33:96.33:0,96,1527	0/0:3,0:3:6.02:0,6,96	0/0:9,0:9:24.07:0,24,361	0/0:17,0:17:51.17:0,51,806	0/0:13,0:13:39.13:0,39,623	0/1:6,12:21:80.76:653,0,81	0/0:20,0:20:60.20:0,60,957	1/1:0,6:6:18.06:238,18,0
chr10	67548784	.	C	CA	765.18	PASS	AB=0.910;AC=12;AF=0.214;AN=56;BaseQRankSum=-3.113;DP=411;FS=0.000;HRun=16;HaplotypeScore=49.4556;InbreedingCoeff=0.5203;MQ=58.56;MQ0=19;MQRankSum=-0.230;QD=5.84;ReadPosRankSum=-1.160;VQSLOD=1.8515;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,13:19:14.74:119,15,0	1/1:0,7:7:9.01:85,9,0	0/0:34,0:12:19.96:0,20,113	0/1:19,0:4:4.69:5,0,17	0/0:19,1:20:17.33:0,17,261	0/0:12,0:12:9.39:0,9,131	0/0:13,0:13:14.80:0,15,109	1/1:9,12:18:27.04:261,27,0	0/0:12,0:12:17.76:0,18,125	0/0:19,0:18:26.68:0,27,188	0/0:14,0:14:30.40:0,30,202	0/0:10,0:10:11.76:0,12,85	0/0:6,0:5:7.20:0,7,46	0/0:7,0:7:14.07:0,14,83	0/0:11,0:10:8.85:0,9,65	0/0:7,0:7:11.92:0,12,87	0/1:10,13:22:11.22:74,0,11	0/1:15,0:13:13.90:14,0,107	0/0:14,0:15:16.96:0,17,127	0/0:20,0:19:38.61:0,39,281	0/0:8,0:6:11.90:0,12,87	0/0:13,0:12:17.31:0,17,117	0/0:10,0:10:9:0,9,101	0/0:9,0:11:6.71:0,7,33	0/0:19,0:19:23.74:0,24,173	1/1:5,14:18:15.19:298,15,0	0/0:16,0:15:20.46:0,20,140	0/1:6,0:6:9.55:75,0,10
chr10	67548852	.	G	GT	381.87	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=-1.325;DP=430;FS=1.863;HRun=10;HaplotypeScore=52.3186;InbreedingCoeff=0.7012;MQ=77.07;MQ0=2;MQRankSum=2.608;QD=10.32;ReadPosRankSum=-2.579;VQSLOD=1.8428;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:16,0:16:1.82:2,0,191	0/0:6,0:6:11.98:0,12,98	0/0:30,0:17:17.38:0,17,221	0/0:29,0:20:19.72:0,20,220	1/1:3,18:21:48:476,48,0	0/0:11,0:11:29.97:0,30,246	0/0:11,0:11:29.95:0,30,244	0/0:17,0:17:38.94:0,39,318	0/0:13,0:15:29:0,29,226	0/0:18,0:18:44.93:0,45,369	0/0:19,0:19:50.89:0,51,412	0/0:12,0:12:26.97:0,27,221	0/0:6,0:7:17.87:0,18,148	0/0:12,0:12:26.90:0,27,219	0/0:12,0:12:23.97:0,24,197	0/0:10,0:10:23.93:0,24,193	0/0:27,0:27:50.60:0,51,404	0/0:19,0:19:55.08:0,55,414	0/0:18,0:18:32.89:0,33,264	0/0:23,0:23:68.91:0,69,564	0/0:9,0:9:23.97:0,24,197	0/0:5,0:5:11.98:0,12,98	0/0:13,0:14:35:0,35,276	0/0:13,0:13:32.95:0,33,271	0/0:16,0:16:35.92:0,36,296	0/0:15,0:15:24.90:0,25,233	0/0:13,0:14:37.97:0,38,298	0/0:10,0:10:29.97:0,30,246
chr10	67549904	.	GT	G	987.19	PASS	AB=0.827;AC=13;AF=0.232;AN=56;BaseQRankSum=5.431;DP=288;FS=1.975;HRun=12;HaplotypeScore=35.9933;InbreedingCoeff=0.6529;MQ=61.83;MQ0=10;MQRankSum=-0.490;QD=9.14;ReadPosRankSum=1.471;VQSLOD=1.7224;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,14:18:8.36:248,8,0	1/1:0,2:2:5.98:46,6,0	0/0:31,1:10:8.97:0,9,75	0/1:27,0:9:0.39:0,0,43	0/0:1,0:8:18.74:0,19,87	0/0:7,0:7:15.03:0,15,149	0/0:8,0:8:18.04:0,18,182	0/1:6,9:15:2.68:160,0,3	0/0:3,0:3:9.02:0,9,91	0/0:9,0:9:21.03:0,21,205	0/1:5,1:6:8.21:8,0,107	0/0:4,0:4:12.02:0,12,122	0/0:5,0:5:11.98:0,12,110	0/0:9,0:9:21.04:0,21,213	0/0:8,0:8:18.04:0,18,182	0/0:6,0:6:15.03:0,15,152	1/1:3,18:23:57.86:430,58,0	0/0:19,0:19:38.84:0,39,342	0/0:12,0:10:10.46:0,10,199	0/0:13,1:14:18.81:0,19,362	0/0:6,0:6:15.03:0,15,152	0/0:2,0:3:6.01:0,6,59	0/0:1,0:1:3:0,3,25	0/0:5,0:5:15.02:0,15,146	0/0:10,0:10:30.06:0,30,304	1/1:3,6:8:16.96:122,17,0	0/0:10,0:10:24.05:0,24,243	1/1:0,7:7:17.93:139,18,0
chr10	67550311	.	TA	T	3693.64	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=9.363;DP=435;FS=2.310;HRun=9;HaplotypeScore=44.3284;InbreedingCoeff=0.9712;MQ=70.21;MQ0=2;MQRankSum=-0.260;QD=23.09;ReadPosRankSum=0.316;VQSLOD=4.2835;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,27:27:72.04:659,72,0	1/1:0,8:8:21.01:192,21,0	0/0:18,0:13:22.63:0,23,213	0/0:18,0:13:17.17:0,17,128	1/1:3,21:24:57.03:521,57,0	0/0:20,0:20:54.15:0,54,614	0/0:9,0:9:24.07:0,24,277	1/1:3,24:27:71.97:639,72,0	0/0:7,0:7:18.05:0,18,208	0/0:20,0:20:57.17:0,57,657	0/0:19,0:19:54.16:0,54,623	0/0:6,0:6:15.04:0,15,173	0/0:7,0:7:21.05:0,21,233	0/0:8,0:8:21.06:0,21,242	0/0:12,0:12:33.10:0,33,381	0/0:8,0:8:21.05:0,21,234	1/1:6,31:37:78.04:714,78,0	0/0:17,0:17:51.11:0,51,573	0/0:16,0:16:39.12:0,39,450	0/0:22,0:22:57.14:0,57,638	0/0:6,0:6:15.04:0,15,173	0/0:4,0:4:9.03:0,9,104	0/0:21,0:21:57.17:0,57,658	0/0:5,0:5:12.04:0,12,138	0/0:14,0:14:42.11:0,42,475	1/1:0,18:18:53.95:475,54,0	0/0:18,0:18:45.13:0,45,519	1/1:1,18:18:54.03:494,54,0
chr10	67551065	.	T	TTC	5678.08	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-11.825;DP=527;FS=0.873;HRun=0;HaplotypeScore=63.4526;InbreedingCoeff=0.9956;MQ=95.85;MQ0=0;MQRankSum=-3.615;QD=46.93;ReadPosRankSum=0.926;VQSLOD=5.7883;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,30:34:75.26:1364,75,0	1/1:0,7:7:21.07:385,21,0	0/0:25,0:25:60.16:0,60,892	0/0:26,0:26:61.71:0,62,810	0/0:26,0:26:72.06:0,72,1030	0/0:7,0:7:21.07:0,21,301	0/0:21,0:21:63.20:0,63,877	1/1:3,20:23:57.67:1046,58,0	0/0:16,0:16:42.14:0,42,602	0/0:21,0:21:57.18:0,57,785	0/0:12,0:12:36.12:0,36,515	0/0:10,0:10:24.08:0,24,344	0/0:14,0:14:39.13:0,39,558	0/0:11,0:11:27.09:0,27,386	0/0:24,0:24:69.22:0,69,966	0/0:14,0:14:42.14:0,42,601	1/1:3,27:30:78.27:1429,78,0	0/0:16,0:16:45.11:0,45,622	0/0:26,0:26:75.24:0,75,1057	0/0:15,0:15:45.13:0,45,602	0/0:35,0:35:96.32:0,96,1373	0/0:20,0:20:57.18:0,57,800	0/0:25,0:25:69.23:0,69,986	0/0:19,0:19:57.17:0,57,798	0/0:9,0:9:24.08:0,24,344	1/1:0,21:21:63.20:1124,63,0	0/0:14,0:14:36.10:0,36,497	1/1:0,6:6:18.06:330,18,0
chr10	67551146	.	G	GA	2176.31	PASS	AB=0.759;AC=12;AF=0.214;AN=56;BaseQRankSum=-4.045;DP=458;FS=7.587;HRun=10;HaplotypeScore=54.5473;InbreedingCoeff=0.4544;MQ=75.00;MQ0=5;MQRankSum=-0.778;QD=15.43;ReadPosRankSum=-2.770;VQSLOD=2.7667;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:11,20:31:37.40:717,37,0	0/1:3,4:7:6.60:133,0,7	0/0:37,0:19:1.49:0,1,102	0/0:34,0:17:16.68:0,17,179	1/1:4,9:15:1.36:238,1,0	0/0:6,0:6:14.98:0,15,123	0/0:13,0:13:26.84:0,27,211	1/1:8,21:29:17.76:565,18,0	0/0:13,0:13:29.81:0,30,242	0/0:15,0:15:26.94:0,27,220	0/0:14,0:14:35.96:0,36,295	0/0:10,0:10:23.65:0,24,183	0/0:8,0:9:20.01:0,20,153	0/0:5,0:5:14.93:0,15,114	0/0:12,0:12:26.95:0,27,222	0/0:11,0:11:32.96:0,33,271	0/1:12,14:25:26.24:370,0,26	0/0:11,0:11:32.96:0,33,271	0/0:16,1:17:1.18:0,1,215	0/0:18,0:20:34.84:0,35,262	0/0:15,0:17:34.02:0,34,258	0/1:12,0:12:20.58:21,0,102	0/0:21,1:22:22.08:0,22,378	0/0:21,1:22:25.09:0,25,400	0/0:13,0:13:29.95:0,30,244	0/1:12,6:18:62.51:199,0,63	0/0:15,0:16:43.97:0,44,347	1/1:1,2:3:9.02:95,9,0
chr10	67551250	.	CG	C	1818.52	PASS	AB=0.967;AC=16;AF=0.286;AN=56;BaseQRankSum=4.414;DP=441;FS=1.770;HRun=2;HaplotypeScore=47.8494;InbreedingCoeff=0.7878;MQ=50.35;MQ0=61;MQRankSum=-5.046;QD=10.57;ReadPosRankSum=-1.624;VQSLOD=1.0801;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,14:19:44.60:462,45,0	1/1:1,5:5:9.03:116,9,0	0/0:47,0:5:3.30:0,3,97	0/1:48,0:10:1.27:1,0,64	1/1:5,8:12:14.98:136,15,0	0/0:14,0:13:29.68:0,30,385	0/1:13,1:14:8.26:8,0,297	1/1:8,5:13:26.59:231,27,0	0/0:6,0:4:8.98:0,9,109	0/0:17,0:16:41.66:0,42,481	0/0:10,0:10:21.04:0,21,273	0/0:9,0:9:24.04:0,24,298	0/0:7,0:5:8.82:0,9,101	0/0:9,1:8:21.06:0,21,294	0/0:13,0:13:36.11:0,36,515	0/0:8,0:8:21.04:0,21,271	1/1:15,14:23:47.53:467,48,0	0/0:19,0:19:51:0,51,643	0/0:18,0:13:33.02:0,33,423	0/0:14,0:13:30.89:0,31,362	0/0:13,0:13:27.70:0,28,345	0/0:9,0:9:16.63:0,17,192	0/0:9,0:9:24.02:0,24,310	0/0:18,1:18:13.14:0,13,652	0/0:5,0:5:8.24:0,8,97	1/1:3,11:14:36.09:435,36,0	0/0:22,0:22:53.84:0,54,663	1/1:9,4:4:12.04:154,12,0
chr10	67551264	.	CA	C	649.18	PASS	AB=0.905;AC=20;AF=0.357;AN=56;BaseQRankSum=2.307;DP=463;FS=1.177;HRun=15;HaplotypeScore=58.2763;InbreedingCoeff=0.2234;MQ=55.12;MQ0=53;MQRankSum=-2.030;QD=3.14;ReadPosRankSum=-0.395;VQSLOD=-0.6255;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,10:19:4.40:140,4,0	1/1:4,2:6:4.92:25,5,0	0/0:45,0:5:2.80:0,3,13	0/0:52,0:15:19.78:0,20,129	0/0:10,0:17:37.86:0,38,237	0/0:13,0:12:17.35:0,17,119	0/1:8,2:11:33.68:34,0,88	1/1:5,12:18:31.56:198,32,0	0/1:8,0:6:6.37:6,0,68	0/0:19,0:17:27:0,27,238	1/1:6,1:7:5.82:38,6,0	0/0:6,0:8:14.83:0,15,116	0/0:9,0:10:14.82:0,15,114	0/0:8,0:6:3:0,3,27	0/0:15,1:16:2.61:0,3,137	0/0:6,0:6:11.92:0,12,96	1/1:20,9:25:10.69:177,11,0	0/1:20,4:24:15.17:15,0,291	0/1:12,2:13:12.67:13,0,149	0/1:15,2:16:8.70:9,0,161	0/1:10,1:12:7.27:7,0,67	0/0:9,0:10:11.09:0,11,119	0/0:10,0:10:20.32:0,20,158	0/0:19,0:19:26.02:0,26,245	0/1:4,0:4:13.17:13,0,20	1/1:5,7:14:1.38:118,1,0	0/0:16,0:19:38.36:0,38,284	0/1:15,1:8:26.53:27,0,41
chr10	67551284	.	C	CA	285.31	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-1.216;DP=421;FS=1.079;HRun=9;HaplotypeScore=59.5982;InbreedingCoeff=0.6814;MQ=60.43;MQ0=6;MQRankSum=-0.231;QD=12.40;ReadPosRankSum=-0.018;VQSLOD=2.9319;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:41.86:0,42,340	0/0:8,0:8:21:0,21,182	0/0:26,0:7:17.15:0,17,108	0/0:30,0:13:18.18:0,18,135	1/1:9,14:23:13.05:372,13,0	0/0:9,0:9:14.96:0,15,123	0/0:11,0:11:23.99:0,24,208	0/0:25,0:25:50.92:0,51,433	0/0:9,0:9:23.03:0,23,188	0/0:16,0:14:29.99:0,30,260	0/0:15,0:15:32.81:0,33,286	0/0:10,0:10:23.99:0,24,208	0/0:10,0:10:9.82:0,10,100	0/0:3,0:3:5.98:0,6,48	0/0:8,0:8:8.97:0,9,78	0/0:6,0:6:11.86:0,12,90	0/0:29,0:26:41.86:0,42,364	0/0:29,0:29:59.91:0,60,514	0/0:19,0:17:38.97:0,39,335	0/0:16,0:16:29.98:0,30,259	0/0:12,0:12:11.97:0,12,104	0/0:9,0:9:23.79:0,24,194	0/0:9,0:9:17.98:0,18,156	0/0:19,0:19:40.97:0,41,337	0/0:6,0:6:8.98:0,9,78	0/0:15,0:15:35.97:0,36,312	0/0:18,0:18:32.88:0,33,267	0/0:6,0:6:14.99:0,15,130
chr10	67551391	.	G	GA	116.67	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=0.585;DP=457;FS=0.000;HRun=10;HaplotypeScore=66.4401;InbreedingCoeff=0.7067;MQ=61.76;MQ0=9;MQRankSum=1.058;QD=9.72;ReadPosRankSum=-0.544;VQSLOD=2.3057;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:33:82.90:0,83,669	0/0:5,0:5:11.98:0,12,99	0/0:23,0:8:17.59:0,18,129	0/0:14,0:9:0.76:0,1,62	1/1:3,9:12:21.01:209,21,0	0/0:13,0:13:28.76:0,29,227	0/0:19,0:18:41.74:0,42,333	0/0:23,0:22:55.62:0,56,443	0/0:7,0:7:11.95:0,12,96	0/0:14,0:14:32.94:0,33,268	0/0:13,0:13:20.58:0,21,167	0/0:14,0:14:32.90:0,33,264	0/0:9,0:9:14.94:0,15,123	0/0:9,0:8:14.96:0,15,123	0/0:16,0:16:38.90:0,39,313	0/0:9,0:9:17.96:0,18,147	0/0:22,0:20:25.65:0,26,221	0/0:23,0:25:55.79:0,56,441	0/0:18,0:16:28.30:0,28,282	0/0:20,0:21:43.91:0,44,350	0/0:4,0:4:11.99:0,12,98	0/0:12,0:12:26.94:0,27,219	0/0:15,0:15:32.80:0,33,260	0/0:35,1:37:55.90:0,56,637	0/0:15,0:14:29.87:0,30,246	0/0:24,1:26:27.77:0,28,418	0/0:17,0:17:34.73:0,35,271	0/0:8,0:9:20.86:0,21,155
chr10	67551433	.	ACT	A	772.43	PASS	AB=1.000;AC=35;AF=0.761;AN=46;BaseQRankSum=4.029;DP=443;FS=22.702;HRun=0;HaplotypeScore=82.0212;InbreedingCoeff=0.4242;MQ=67.34;MQ0=15;MQRankSum=-1.040;QD=3.02;ReadPosRankSum=1.250;VQSLOD=0.3081;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:30:5.44:24,5,0	./.	0/0:33,0:11:0:0,0,0	0/0:41,0:20:0:0,0,0	1/1:12,0:13:7.24:32,7,0	0/1:15,0:15:0:0,0,0	1/1:16,2:18:11.86:110,12,0	./.	1/1:3,1:6:8.69:60,9,0	./.	1/1:10,0:10:3.01:32,3,0	1/1:10,1:12:8.84:70,9,0	0/0:7,0:7:5.98:0,6,62	1/1:6,3:10:8.69:78,9,0	1/1:11,1:12:3:32,3,0	1/1:7,0:10:11.53:73,12,0	1/1:16,0:18:11.36:56,11,0	1/1:13,0:14:2.84:14,3,0	1/1:20,1:20:3.01:32,3,0	1/1:14,0:15:2.84:14,3,0	1/1:7,1:9:8.83:69,9,0	0/0:13,0:13:3:0,3,25	./.	0/0:30,1:31:3.92:0,4,392	./.	1/1:11,0:21:17.04:84,17,0	1/1:9,1:13:11.55:92,12,0	1/1:5,0:6:2.84:14,3,0
chr10	67551672	.	GAT	G	731.63	PASS	AB=0.970;AC=4;AF=0.071;AN=56;BaseQRankSum=6.268;DP=486;FS=13.717;HRun=0;HaplotypeScore=62.0374;InbreedingCoeff=0.5598;MQ=70.31;MQ0=0;MQRankSum=0.239;QD=10.16;ReadPosRankSum=-1.394;VQSLOD=1.7729;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:63.19:0,63,1005	0/0:8,0:8:21.07:0,21,346	0/0:12,0:13:20.54:0,21,236	0/1:12,0:11:0.04:0,0,151	1/1:3,25:29:66.21:825,66,0	0/0:17,0:17:39.10:0,39,612	0/0:20,1:21:19.66:0,20,814	0/1:29,2:31:5.81:6,0,944	0/0:11,0:11:27.09:0,27,446	0/0:22,0:22:57.19:0,57,919	0/0:22,1:23:16.68:0,17,798	0/0:19,0:19:42.14:0,42,693	0/0:7,0:7:18.06:0,18,297	0/0:13,0:13:33.10:0,33,520	0/0:9,0:9:27.08:0,27,421	0/0:10,0:10:27.09:0,27,446	0/0:26,0:26:72.22:0,72,1158	0/0:27,0:27:66.19:0,66,1060	0/0:22,1:23:13.65:0,14,755	0/0:23,0:25:66.19:0,66,1018	0/0:11,0:11:30.09:0,30,469	0/0:11,0:11:33.11:0,33,542	0/0:13,0:13:36.12:0,36,594	0/0:11,0:11:33.11:0,33,534	0/0:19,0:19:29.43:0,29,817	0/0:18,0:18:39.13:0,39,633	0/0:22,0:22:54.17:0,54,846	0/0:11,0:11:33.08:0,33,510
chr10	67554617	.	T	TGCTGAGATTAAA	6463.13	PASS	AC=10;AF=0.185;AN=54;BaseQRankSum=-2.388;DP=348;FS=6.616;HRun=0;HaplotypeScore=108.5890;InbreedingCoeff=0.9536;MQ=53.77;MQ0=16;MQRankSum=-9.672;QD=71.81;ReadPosRankSum=-2.521;VQSLOD=3.8136;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,10:22:30.06:1492,30,0	1/1:8,3:11:21.07:1011,21,0	0/0:23,0:9:21.07:0,21,596	0/0:19,0:10:14.97:0,15,518	0/0:9,0:9:23.23:0,23,747	0/0:20,0:18:33.10:0,33,1010	0/0:10,0:10:30.10:0,30,1048	1/1:21,3:22:24.08:1258,24,0	0/0:10,0:9:24.08:0,24,815	0/0:20,0:19:42.14:0,42,1466	0/0:4,0:4:9.03:0,9,305	0/0:13,0:13:24.08:0,24,834	0/0:11,0:11:23.82:0,24,859	0/0:8,0:8:21.07:0,21,663	0/0:7,0:7:15.05:0,15,537	0/0:10,0:10:24.08:0,24,859	1/1:12,5:18:21.07:1095,21,0	0/0:16,0:16:33.11:0,33,1122	0/0:13,0:10:27.09:0,27,849	0/0:8,0:7:21.07:0,21,752	0/0:14,0:14:36.12:0,36,1218	0/0:5,0:5:15.05:0,15,463	0/0:3,0:3:9.03:0,9,322	0/0:17,0:17:30.10:0,30,984	0/0:9,0:9:27.09:0,27,966	1/1:9,5:12:30.10:1607,30,0	0/0:9,0:9:27.09:0,27,955	./.
chr10	67555802	.	TAC	T	191.32	PASS	AB=0.946;AC=14;AF=0.269;AN=52;BaseQRankSum=2.632;DP=447;FS=3.316;HRun=0;HaplotypeScore=58.5495;InbreedingCoeff=-0.2231;MQ=58.42;MQ0=12;MQRankSum=1.333;QD=0.98;ReadPosRankSum=-0.297;VQSLOD=1.4336;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:5.97:0,6,49	0/0:8,0:8:6.47:0,6,53	./.	0/0:27,0:15:0.89:0,1,2	0/0:12,0:12:5.61:0,6,51	0/1:12,1:13:12.21:12,0,229	0/1:12,0:14:5.13:5,0,41	0/0:27,0:27:23.88:0,24,223	0/1:17,1:18:12.20:12,0,251	0/1:10,2:12:54.64:55,0,102	0/1:12,0:12:11.88:12,0,230	0/1:9,0:9:6.20:6,0,208	0/0:8,0:8:3.01:0,3,45	0/1:8,1:9:21.27:21,0,98	0/0:15,0:15:15.03:0,15,198	./.	0/0:21,0:21:3.01:0,3,38	0/0:15,0:15:24.08:0,24,362	0/1:12,1:13:21.24:21,0,112	1/1:6,3:10:8.86:80,9,0	0/1:27,0:26:5:5,0,313	0/1:16,0:16:12.01:12,0,226	0/0:8,0:8:15.05:0,15,222	0/1:23,3:27:54.67:55,0,469	0/1:13,0:13:33.51:34,0,226	0/0:26,0:24:29.82:0,30,254	0/0:10,0:10:6.02:0,6,89	0/0:5,0:5:2.98:0,3,21
chr10	67559707	.	TGTGTGC	T	1412.15	PASS	AB=1.000;AC=8;AF=0.143;AN=56;BaseQRankSum=-2.174;DP=813;FS=2.811;HRun=0;HaplotypeScore=191.1281;InbreedingCoeff=0.1268;MQ=56.31;MQ0=10;MQRankSum=0.996;QD=7.35;ReadPosRankSum=-4.374;VQSLOD=1.8665;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:29,15:44:62.94:800,63,0	0/1:14,0:14:47.04:47,0,443	0/0:35,0:16:12.96:0,13,321	0/0:22,0:11:22.82:0,23,328	0/1:16,0:16:10.06:10,0,36	0/0:21,0:21:47.92:0,48,1148	0/0:27,0:27:78.13:0,78,1983	0/1:31,0:31:99:397,0,221	0/0:25,0:25:63.19:0,63,1881	0/0:34,0:34:99:0,99,2256	0/0:21,0:21:57.02:0,57,1324	0/0:28,0:28:75.21:0,75,2021	0/0:27,0:27:74.27:0,74,1726	0/0:30,0:30:86.68:0,87,2201	0/0:28,0:27:71.54:0,72,1673	0/0:25,0:24:69.04:0,69,1620	0/1:45,0:43:26.58:27,0,1945	0/0:15,0:15:22.02:0,22,929	0/0:30,0:30:71.97:0,72,1276	0/0:33,0:33:90.16:0,90,2186	0/0:97,0:95:99:0,259,5571	0/0:20,0:20:54.08:0,54,1305	0/0:17,0:17:48.11:0,48,1321	0/0:40,0:40:99:0,102,2550	0/0:29,0:29:78.09:0,78,2020	0/1:31,0:31:99:185,0,769	0/0:17,0:17:50.82:0,51,1255	0/1:11,0:11:87.31:87,0,214
chr10	67559711	.	TGC	T	1973.83	PASS	AB=0.953;AC=10;AF=0.179;AN=56;BaseQRankSum=3.465;DP=834;FS=21.921;HRun=0;HaplotypeScore=132.6585;InbreedingCoeff=0.2152;MQ=56.19;MQ0=10;MQRankSum=0.018;QD=9.27;ReadPosRankSum=-2.697;VQSLOD=1.3508;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:49,0:49:70.78:536,71,0	0/1:15,0:15:68.93:155,0,69	0/0:33,0:15:12.92:0,13,276	0/0:22,0:11:22.80:0,23,252	0/1:16,0:16:9.23:9,0,36	0/0:19,0:19:31.82:0,32,590	0/0:30,0:30:65.87:0,66,1053	1/1:29,0:29:24.48:498,24,0	0/0:25,0:25:52.18:0,52,982	0/0:38,0:38:73.77:0,74,1352	0/0:20,0:20:59.98:0,60,794	0/0:28,0:28:13.08:0,13,971	0/0:30,0:30:41.45:0,41,809	0/0:30,0:30:57.13:0,57,1094	0/0:28,0:27:0.01:0,0,765	0/0:25,0:24:71.87:0,72,880	0/1:42,5:46:99:259,0,429	0/1:17,0:17:17.08:17,0,497	0/0:28,0:28:6.43:0,6,702	0/0:34,0:34:23.51:0,24,969	0/0:102,0:100:99:0,160,2965	0/0:20,0:20:53.96:0,54,707	0/0:18,0:18:5.13:0,5,679	0/0:39,1:40:76.16:0,76,1433	0/0:34,0:34:56.76:0,57,1144	0/1:28,1:29:99:450,0,115	0/0:17,0:17:7.82:0,8,626	0/1:9,2:11:11.90:203,0,12
chr10	67559713	.	CGT	C	456.86	PASS	AB=0.909;AC=17;AF=0.304;AN=56;BaseQRankSum=7.569;DP=832;FS=5.924;HRun=0;HaplotypeScore=138.3807;InbreedingCoeff=-0.2102;MQ=55.78;MQ0=10;MQRankSum=0.028;QD=0.95;ReadPosRankSum=0.943;VQSLOD=2.2531;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:49,0:49:15.82:77,16,0	0/0:14,0:14:8.57:0,9,240	0/0:32,0:14:2.97:0,3,20	0/0:23,0:11:3.01:0,3,44	1/1:3,0:16:0.22:1,0,0	0/0:18,1:19:1.36:0,1,404	0/1:29,3:32:3.12:3,0,790	0/0:28,0:28:20.62:0,21,194	0/0:23,1:24:16.54:0,17,709	0/0:38,0:38:63.72:0,64,942	0/0:20,0:20:33.10:0,33,483	0/1:24,3:27:42.95:43,0,707	0/1:24,4:30:46.30:46,0,597	0/1:26,3:30:47.50:47,0,774	0/1:24,3:27:89.91:90,0,588	0/0:24,1:24:39.13:0,39,599	0/0:47,0:45:45.41:0,45,1166	0/1:16,0:17:30.31:30,0,426	0/1:22,4:26:51.45:51,0,339	0/1:29,5:35:99:101,0,712	0/1:98,5:101:15.82:16,0,1990	0/0:20,0:20:33.11:0,33,508	0/1:17,2:19:24.03:24,0,532	0/1:36,4:40:22.67:23,0,1030	0/0:33,1:34:16.35:0,16,885	0/0:27,0:27:10.92:0,11,389	0/1:16,2:19:24.13:24,0,506	0/1:10,0:10:32.87:33,0,98
chr10	67560254	.	T	TAC	3817.21	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-10.605;DP=772;FS=24.866;HRun=0;HaplotypeScore=122.7861;InbreedingCoeff=0.9759;MQ=47.33;MQ0=18;MQRankSum=2.864;QD=25.11;ReadPosRankSum=-1.337;VQSLOD=2.2672;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,25:35:12.82:680,13,0	1/1:4,6:8:15.05:240,15,0	0/0:32,0:15:8.85:0,9,75	0/0:35,0:17:27.37:0,27,264	0/0:32,0:33:83.77:0,84,874	0/0:24,0:24:42.07:0,42,476	0/0:25,0:25:53.98:0,54,576	1/1:15,19:34:24.23:860,24,0	0/0:35,0:36:65.18:0,65,805	0/0:34,0:34:83.88:0,84,931	0/0:30,0:30:57.06:0,57,635	0/0:17,0:17:27:0,27,288	0/0:14,0:14:33.06:0,33,379	0/0:13,0:13:21.02:0,21,236	0/0:28,0:28:59.90:0,60,599	0/0:20,0:21:45.01:0,45,491	1/1:5,26:31:50.15:780,50,0	0/0:36,0:38:99:0,100,1145	0/0:27,0:27:47.94:0,48,533	0/0:45,0:46:99:0,108,1265	0/0:36,0:34:50.25:0,50,800	0/0:25,0:26:53.70:0,54,564	0/0:19,0:19:35.98:0,36,371	0/0:33,0:33:57.17:0,57,682	0/0:27,0:27:42.09:0,42,488	1/1:6,25:28:33.22:969,33,0	0/0:19,0:20:47.98:0,48,553	1/1:1,8:8:18.06:288,18,0
chr10	67560804	.	TAC	T	579.77	PASS	AB=0.923;AC=3;AF=0.054;AN=56;BaseQRankSum=6.709;DP=902;FS=0.000;HRun=0;HaplotypeScore=117.0953;InbreedingCoeff=0.6314;MQ=53.92;MQ0=15;MQRankSum=-0.618;QD=10.17;ReadPosRankSum=0.751;VQSLOD=3.1578;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:47:99:0,111,1747	0/0:11,0:11:30.09:0,30,459	0/0:44,0:28:54.17:0,54,790	0/0:37,0:18:11.98:0,12,140	1/1:3,30:33:60.01:653,60,0	0/0:35,0:35:78.25:0,78,1203	0/0:37,1:38:46.69:0,47,1195	0/0:38,0:32:42.12:0,42,623	0/0:29,0:29:57.19:0,57,841	0/0:40,0:39:87.28:0,87,1348	0/0:24,0:24:20.93:0,21,819	0/0:26,0:26:69.22:0,69,1047	0/0:21,0:21:47.16:0,47,662	0/0:18,0:18:42.11:0,42,624	0/0:33,0:33:63.81:0,64,1038	0/0:35,0:35:92.80:0,93,1413	0/0:36,1:34:46.43:0,46,1215	0/0:24,0:24:54.15:0,54,814	0/1:22,2:23:32.90:33,0,493	0/0:25,1:26:32.80:0,33,961	0/0:58,1:59:99:0,102,1994	0/0:38,0:38:96.33:0,96,1525	0/0:31,0:31:78.24:0,78,1187	0/0:54,0:54:99:0,123,1852	0/0:27,0:26:46.68:0,47,860	0/0:36,1:37:62.88:0,63,1424	0/0:14,0:14:39.11:0,39,602	0/0:20,0:20:35.90:0,36,536
chr10	67564578	.	AT	A	2140.49	PASS	AB=0.938;AC=13;AF=0.232;AN=56;BaseQRankSum=6.342;DP=543;FS=4.709;HRun=12;HaplotypeScore=61.3195;InbreedingCoeff=0.8573;MQ=75.85;MQ0=0;MQRankSum=-0.982;QD=13.81;ReadPosRankSum=0.240;VQSLOD=4.0581;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,30:34:52.44:539,52,0	1/1:3,9:13:28.93:215,29,0	0/1:14,1:14:3.46:3,0,155	0/0:13,0:9:3:0,3,100	0/0:4,0:18:40.04:0,40,214	0/0:21,0:21:57.06:0,57,563	0/0:23,2:25:16.62:0,17,518	1/1:6,25:32:46.23:528,46,0	0/0:12,0:12:33.06:0,33,329	0/0:22,1:23:36.84:0,37,545	0/0:7,0:7:18.03:0,18,179	0/0:26,0:26:21.56:0,22,548	0/0:19,0:19:39.05:0,39,382	0/0:16,0:16:39.55:0,40,397	0/0:23,0:24:50.23:0,50,533	0/0:14,0:14:36.06:0,36,360	1/1:3,19:22:56.78:440,57,0	0/0:21,0:21:54.08:0,54,539	0/0:27,1:29:22.55:0,23,572	0/0:11,1:12:3.82:0,4,220	0/0:14,0:14:24.05:0,24,244	0/0:17,0:17:48.08:0,48,477	0/0:19,0:20:47.92:0,48,466	0/0:21,1:22:30.87:0,31,494	0/0:13,1:14:10.70:0,11,274	1/1:9,16:25:23.30:364,23,0	0/0:18,1:21:30.53:0,31,456	1/1:0,13:14:31.92:238,32,0
chr10	67565417	.	C	CGTGT	4431.27	PASS	AB=0.863;AC=15;AF=0.268;AN=56;BaseQRankSum=-4.983;DP=764;FS=0.453;HRun=0;HaplotypeScore=139.1848;InbreedingCoeff=0.6517;MQ=65.65;MQ0=5;MQRankSum=-1.366;QD=18.09;ReadPosRankSum=-5.282;VQSLOD=3.6163;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:20,36:60:69.08:1584,69,0	1/1:8,8:17:20.62:501,21,0	0/0:41,0:24:5.83:0,6,57	0/0:29,0:16:3.01:0,3,48	1/1:5,1:17:3.01:52,3,0	0/0:19,0:19:21.02:0,21,284	0/1:20,0:24:28.49:28,0,216	1/1:20,5:30:40.92:669,41,0	0/0:39,0:41:38.61:0,39,874	0/0:29,0:32:12.26:0,12,471	0/0:17,0:18:27.07:0,27,385	0/0:27,0:29:20.28:0,20,575	0/0:21,0:23:47.78:0,48,698	0/0:28,0:29:32.67:0,33,427	0/0:30,0:32:66.19:0,66,947	0/0:29,0:33:69.09:0,69,991	1/1:8,17:26:32.58:670,33,0	0/1:19,0:21:6.66:7,0,536	0/0:15,0:16:21.07:0,21,302	0/0:25,0:25:42.13:0,42,627	0/0:32,0:34:65.30:0,65,904	0/0:26,0:26:21.05:0,21,309	0/0:20,0:23:37.89:0,38,473	0/0:17,0:19:42.13:0,42,645	0/0:20,0:23:32.55:0,33,573	0/1:20,13:35:99:680,0,136	0/0:25,0:25:20.49:0,20,312	1/1:7,5:14:14.52:240,15,0
chr10	67566714	.	C	CTTT	1929.27	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=1.038;DP=429;FS=0.583;HRun=15;HaplotypeScore=72.2622;InbreedingCoeff=0.7267;MQ=65.88;MQ0=5;MQRankSum=-3.819;QD=12.78;ReadPosRankSum=-4.322;VQSLOD=0.1617;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,1:17:14.97:177,15,0	1/1:4,1:10:15.01:185,15,0	0/0:18,0:7:4.29:0,4,75	0/1:9,0:5:0:0,0,0	1/1:10,0:25:45.56:572,46,0	0/0:15,0:16:15.82:0,16,167	0/0:5,0:5:8.87:0,9,80	1/1:7,10:19:36:424,36,0	0/0:8,0:8:8.49:0,8,88	0/0:28,0:28:34.07:0,34,337	0/0:15,0:16:24.79:0,25,244	0/0:12,0:12:20.64:0,21,206	0/1:10,0:10:7.92:8,0,89	0/0:11,0:13:5.31:0,5,58	0/0:11,0:11:17.68:0,18,170	0/0:9,0:11:20.70:0,21,182	1/1:5,13:23:32.71:423,33,0	0/0:16,0:18:21.83:0,22,198	0/0:23,0:22:8.92:0,9,258	0/0:20,0:23:19.70:0,20,177	0/0:16,0:15:20.60:0,21,205	0/0:6,0:6:5.85:0,6,59	0/1:9,0:11:1.39:1,0,91	0/0:8,0:8:11.78:0,12,107	0/0:13,0:13:19.05:0,19,193	1/1:15,3:18:18.02:231,18,0	0/0:21,0:29:37.76:0,38,357	1/1:3,3:7:6.02:93,6,0
chr10	67567387	.	TTTTTTTGG	T	4089.18	PASS	AB=0.802;AC=14;AF=0.250;AN=56;BaseQRankSum=6.300;DP=453;FS=6.218;HRun=0;HaplotypeScore=132.7394;InbreedingCoeff=0.7952;MQ=48.66;MQ0=21;MQRankSum=-6.410;QD=29.63;ReadPosRankSum=-1.529;VQSLOD=2.6636;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:11,21:31:5.41:1137,0,5	1/1:7,0:7:20.98:240,21,0	0/0:20,0:11:3.58:0,4,64	0/0:8,0:5:7.86:0,8,115	1/1:11,7:17:47.34:716,47,0	0/0:9,0:9:20.89:0,21,297	0/0:19,0:18:45.03:0,45,976	1/1:16,5:18:26.76:493,27,0	0/0:19,0:19:35.94:0,36,1027	0/0:18,0:16:43.73:0,44,799	0/0:17,0:17:43.40:0,43,854	0/0:16,0:16:21.06:0,21,406	0/0:14,0:14:26.66:0,27,587	0/0:6,0:6:17.97:0,18,339	0/0:16,0:16:45.13:0,45,854	0/0:10,0:10:27.01:0,27,496	1/1:9,12:19:32.69:567,33,0	0/0:9,0:8:15.49:0,15,146	0/0:20,0:19:19.28:0,19,676	0/0:26,0:26:69.15:0,69,1220	0/1:7,0:6:8.75:9,0,123	0/0:16,0:16:44.70:0,45,835	0/0:9,0:8:23.82:0,24,572	0/0:20,0:18:31.74:0,32,726	0/0:21,0:21:46.40:0,46,1178	1/1:7,11:18:41.81:682,42,0	0/0:22,0:21:52.93:0,53,1082	1/1:13,0:8:18:247,18,0
chr10	67567388	.	T	TAC	875.08	PASS	AB=0.880;AC=5;AF=0.089;AN=56;BaseQRankSum=6.573;DP=446;FS=16.984;HRun=0;HaplotypeScore=100.7787;InbreedingCoeff=-0.1086;MQ=47.43;MQ0=21;MQRankSum=-4.970;QD=9.21;ReadPosRankSum=1.210;VQSLOD=2.3712;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:28,2:30:93.91:318,0,94	0/1:3,2:7:45.36:139,0,45	0/0:18,0:9:17.93:0,18,169	0/0:7,0:4:9.03:0,9,129	0/1:16,3:17:52.89:210,0,53	0/0:9,0:9:24.01:0,24,256	0/0:18,0:17:45.14:0,45,598	0/0:21,0:18:10.70:0,11,191	0/0:19,0:19:54.09:0,54,729	0/0:18,0:16:48.08:0,48,595	0/0:16,0:16:45.10:0,45,559	0/0:16,0:16:21.05:0,21,270	0/0:14,0:14:42.12:0,42,573	0/0:6,0:6:18.03:0,18,234	0/0:16,0:16:45.05:0,45,548	0/0:9,0:9:27.08:0,27,346	0/1:20,0:19:21.96:102,0,22	0/0:10,0:9:18.05:0,18,224	0/0:20,0:19:51.16:0,51,716	0/0:26,0:26:74.22:0,74,916	0/0:7,0:6:17.67:0,18,187	0/0:15,0:15:42.06:0,42,535	0/0:11,0:10:19.88:0,20,264	0/0:19,0:17:39.10:0,39,521	0/0:21,0:21:60.16:0,60,827	0/1:15,2:17:66.99:223,0,67	0/0:22,0:21:57.11:0,57,757	0/0:12,0:8:3.31:0,3,73
chr10	67567396	.	TTC	T	1665.34	PASS	AB=0.981;AC=32;AF=0.571;AN=56;BaseQRankSum=6.839;DP=421;FS=28.505;HRun=0;HaplotypeScore=86.6541;InbreedingCoeff=-0.2741;MQ=38.62;MQ0=27;MQRankSum=-0.183;QD=4.49;ReadPosRankSum=2.440;VQSLOD=0.6138;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:31,0:29:62.03:302,62,0	1/1:3,0:3:8.21:39,8,0	0/0:7,0:2:2.04:0,2,6	0/1:6,0:3:0.99:2,0,1	1/1:15,0:13:34.83:198,35,0	0/1:7,0:7:22.34:41,0,22	0/1:19,0:18:4.65:5,0,116	1/1:22,0:19:44.34:247,44,0	0/1:17,0:17:50.82:113,0,51	0/1:15,0:14:27.91:28,0,88	0/1:17,0:17:21.16:21,0,160	0/0:15,1:16:1.48:0,1,68	0/1:13,1:14:63.72:66,0,64	0/1:5,0:5:5.52:6,0,55	0/1:17,0:17:15.59:16,0,103	0/1:8,0:8:36.79:49,0,37	1/1:21,0:19:28.34:145,28,0	0/1:11,1:8:22.36:31,0,22	0/1:22,0:21:56.86:57,0,93	0/0:27,0:26:14.73:0,15,310	0/1:5,1:5:4.25:43,0,4	0/1:14,0:14:37.01:37,0,52	0/1:11,0:10:6.80:7,0,140	0/1:19,1:18:17.91:55,0,18	0/1:18,0:18:35.17:50,0,35	1/1:17,0:17:32.30:184,32,0	0/1:20,0:19:18.71:19,0,96	1/1:14,0:8:14.80:67,15,0
chr10	67568348	.	T	TCATC	494.66	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=1.487;DP=969;FS=5.725;HRun=0;HaplotypeScore=165.8561;InbreedingCoeff=0.9624;MQ=54.69;MQ0=20;MQRankSum=1.069;QD=14.13;ReadPosRankSum=-2.098;VQSLOD=2.8983;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:45:83.41:0,83,1445	0/0:13,0:12:27.09:0,27,447	0/0:39,0:16:11.93:0,12,172	0/0:32,0:19:27.09:0,27,447	1/1:12,19:34:33.02:589,33,0	0/0:31,0:30:72.18:0,72,1160	0/0:36,0:36:53.97:0,54,804	0/0:44,0:44:81.18:0,81,1152	0/0:40,0:40:93.30:0,93,1516	0/0:47,0:46:87.29:0,87,1374	0/0:20,0:20:45.15:0,45,728	0/0:49,0:48:99:0,105,1657	0/0:34,0:34:72.18:0,72,1140	0/0:28,0:26:69.24:0,69,1125	0/0:32,0:32:78.27:0,78,1286	0/0:39,0:38:99:0,99,1510	0/0:33,0:33:60.14:0,60,936	0/0:33,0:32:78.24:0,78,1235	0/0:21,0:14:20.34:0,20,298	0/0:31,0:31:48.19:0,48,952	0/0:100,0:97:99:0,196,3110	0/0:23,0:23:54.18:0,54,862	0/0:22,0:22:39.13:0,39,643	0/0:39,0:39:72.18:0,72,1110	0/0:23,0:23:63.16:0,63,930	0/0:33,0:30:69.24:0,69,1139	0/0:30,0:29:63.16:0,63,982	0/0:14,0:14:30.04:0,30,441
chr10	67568845	.	GA	G	3572.91	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=10.202;DP=606;FS=2.552;HRun=10;HaplotypeScore=62.2359;InbreedingCoeff=0.9565;MQ=69.60;MQ0=2;MQRankSum=-0.476;QD=20.89;ReadPosRankSum=2.235;VQSLOD=4.7664;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,37:39:89.97:781,90,0	1/1:2,12:14:31.65:284,32,0	0/0:17,0:15:14.49:0,14,226	0/0:21,1:17:2.37:0,2,236	1/1:4,17:21:53.89:459,54,0	0/0:26,1:27:49.85:0,50,755	0/0:25,0:25:72.19:0,72,792	1/1:5,23:28:65.97:572,66,0	0/0:19,0:19:47.86:0,48,504	0/0:28,0:27:78.03:0,78,833	0/0:17,0:16:36.98:0,37,400	0/0:20,0:19:48.11:0,48,522	0/0:14,0:14:33.07:0,33,355	0/0:16,1:17:16.01:0,16,383	0/0:14,0:14:39.11:0,39,431	0/0:19,0:19:48.13:0,48,531	1/1:4,24:28:59.98:521,60,0	0/0:32,0:32:87.24:0,87,961	0/0:17,0:16:45.12:0,45,498	0/0:22,0:23:60:0,60,645	0/0:10,0:11:26.91:0,27,279	0/0:22,0:22:34.14:0,34,597	0/0:20,0:20:60.16:0,60,663	0/0:26,0:26:64.82:0,65,683	0/0:19,1:20:25.08:0,25,505	1/1:0,23:23:68.99:598,69,0	0/0:24,1:24:36.76:0,37,606	1/1:3,15:18:14.81:357,15,0
chr10	67569794	.	TTCTC	T	389.03	PASS	AB=0.989;AC=14;AF=0.250;AN=56;BaseQRankSum=1.870;DP=533;FS=0.000;HRun=0;HaplotypeScore=96.7674;InbreedingCoeff=0.1744;MQ=78.26;MQ0=15;MQRankSum=0.306;QD=1.82;ReadPosRankSum=0.017;VQSLOD=1.7314;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:44,0:44:59.10:59,0,320	0/0:5,0:5:8.52:0,9,98	0/0:25,1:19:6.02:0,6,100	0/1:32,1:26:26.23:26,0,145	0/0:16,0:16:30.10:0,30,557	0/0:26,0:25:47.64:0,48,810	0/1:20,0:20:19.25:19,0,309	0/0:19,0:19:17.17:0,17,210	0/0:27,0:26:21.27:0,21,404	0/0:18,0:18:25.52:0,26,355	0/0:7,0:7:18.95:0,19,327	1/1:16,0:17:6.01:65,6,0	0/0:15,0:15:27.50:0,27,397	1/1:5,7:12:3.01:48,3,0	0/0:19,0:19:30.10:0,30,585	0/1:14,0:13:1.24:1,0,216	0/1:26,0:26:4.02:4,0,382	0/1:16,0:16:30.38:30,0,454	0/0:23,0:22:11.90:0,12,190	0/1:7,0:6:7:7,0,98	0/0:22,0:20:36.12:0,36,634	0/1:14,0:14:16.31:16,0,375	0/0:15,0:14:9.03:0,9,172	0/0:33,1:34:8.09:0,8,722	1/1:9,0:9:18.06:265,18,0	0/0:18,0:18:31.75:0,32,476	0/0:17,0:16:21.06:0,21,308	0/0:11,0:11:14.07:0,14,204
chr10	67569821	.	TCTCTCA	T	395.26	PASS	AB=0.959;AC=11;AF=0.196;AN=56;BaseQRankSum=3.248;DP=527;FS=9.107;HRun=0;HaplotypeScore=105.4573;InbreedingCoeff=-0.2006;MQ=54.57;MQ0=20;MQRankSum=-0.128;QD=1.62;ReadPosRankSum=-1.249;VQSLOD=1.1774;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:53,0:53:58.69:59,0,320	0/0:6,0:6:3.17:0,3,84	0/0:9,0:3:6.02:0,6,100	0/1:13,0:6:26.53:27,0,144	0/0:17,0:16:36.11:0,36,648	0/0:26,0:25:60.08:0,60,1058	0/1:19,0:18:13.81:14,0,403	0/0:18,0:17:20.15:0,20,231	0/0:21,0:20:29.96:0,30,511	0/0:14,0:14:32.40:0,32,427	0/0:11,0:11:21.96:0,22,377	0/1:7,12:18:12.14:52,0,12	0/0:17,0:17:20.86:0,21,642	0/1:13,0:13:13.72:43,0,14	0/0:15,0:15:11.61:0,12,740	0/0:8,0:7:15.83:0,16,251	0/1:33,0:33:18.46:18,0,360	0/0:22,0:20:37.04:0,37,798	0/0:11,0:10:1.99:0,2,198	0/0:11,0:9:14.41:0,14,163	0/1:29,0:27:90.19:90,0,632	0/1:21,0:21:24.86:25,0,577	0/0:16,0:15:17.89:0,18,299	0/0:43,0:41:93.34:0,93,1411	0/1:8,0:8:5.66:196,0,6	0/0:18,0:18:18.01:0,18,468	0/1:20,0:19:0.76:1,0,537	0/1:15,0:14:11.17:11,0,182
chr10	67569823	.	TCTCACACACA	T	540.07	PASS	AB=0.976;AC=14;AF=0.250;AN=56;BaseQRankSum=2.480;DP=518;FS=9.172;HRun=0;HaplotypeScore=132.2181;InbreedingCoeff=-0.3203;MQ=54.43;MQ0=18;MQRankSum=-0.478;QD=2.12;ReadPosRankSum=-0.096;VQSLOD=1.5521;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:51,0:51:99:161,0,160	0/1:5,0:5:17.86:18,0,31	0/0:9,0:2:2.98:0,3,22	0/1:13,0:6:10.85:11,0,48	0/0:16,0:15:35.75:0,36,821	0/0:25,0:25:42.76:0,43,1335	0/1:18,0:17:23.70:24,0,570	0/1:18,0:17:14.20:14,0,65	0/0:21,0:20:12.48:0,12,728	0/1:14,0:14:8.11:8,0,411	0/0:11,0:11:1.35:0,1,383	0/1:19,0:18:8.79:9,0,110	0/0:15,0:15:21.41:0,21,1104	0/0:15,0:15:14.75:0,15,356	0/0:15,0:15:45.09:0,45,1149	0/0:8,0:7:14.77:0,15,188	0/1:17,17:34:99:125,0,142	0/0:22,0:20:31.75:0,32,1521	0/1:11,0:10:0.56:1,0,278	0/1:11,0:9:27.03:27,0,384	0/0:29,0:27:64.60:0,65,929	0/1:20,0:20:1.03:1,0,980	0/0:10,0:13:17.33:0,17,565	0/0:43,0:41:55.50:0,56,2243	0/1:9,0:9:68.54:69,0,172	0/1:17,0:17:99:116,0,157	0/0:20,0:19:48.12:0,48,1149	0/1:15,0:14:78.87:100,0,79
chr10	67569825	.	TCACACACA	T	624.39	PASS	AC=10;AF=0.185;AN=54;BaseQRankSum=3.908;DP=525;FS=5.674;HRun=0;HaplotypeScore=118.7400;InbreedingCoeff=0.6146;MQ=53.92;MQ0=20;MQRankSum=-2.214;QD=5.20;ReadPosRankSum=1.536;VQSLOD=2.0513;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:29,21:50:2.13:13,2,0	1/1:2,3:5:3.01:73,3,0	./.	0/0:17,1:7:3.01:0,3,83	0/0:16,0:15:24.08:0,24,553	0/0:24,0:24:28.91:0,29,984	0/0:21,0:20:27.96:0,28,730	0/0:17,0:16:0.37:0,0,2	0/0:21,0:20:18.04:0,18,503	0/0:14,0:14:12.03:0,12,292	0/0:12,0:12:15.05:0,15,363	0/0:19,0:18:0.14:0,0,92	0/0:15,0:15:30.09:0,30,878	0/0:15,0:15:14.68:0,15,352	0/0:15,0:15:30.09:0,30,873	0/0:7,0:7:4.62:0,5,29	1/1:33,0:33:0.10:292,0,0	0/0:22,0:20:45.11:0,45,1222	0/0:11,0:10:8.99:0,9,192	0/0:11,0:9:11.93:0,12,308	0/0:29,0:26:34.66:0,35,525	0/0:22,0:22:36.07:0,36,884	0/0:14,0:13:14.65:0,15,468	0/0:42,0:40:66.15:0,66,1811	0/0:9,0:9:9.03:0,9,200	1/1:14,2:17:11.73:237,12,0	0/0:19,0:18:39.06:0,39,927	1/1:8,1:14:6.02:141,6,0
chr10	67570924	.	CT	C	929.85	PASS	AB=0.911;AC=18;AF=0.321;AN=56;BaseQRankSum=5.050;DP=526;FS=30.476;HRun=15;HaplotypeScore=61.9901;InbreedingCoeff=0.3739;MQ=69.11;MQ0=10;MQRankSum=1.836;QD=3.52;ReadPosRankSum=3.845;VQSLOD=-0.5626;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,21:32:30.37:184,30,0	1/1:0,5:5:11.80:77,12,0	0/1:42,0:15:0.94:1,0,63	0/0:26,0:11:5.35:0,5,29	1/1:6,1:20:25.46:85,25,0	0/0:8,0:8:8.26:0,8,78	0/0:14,2:16:5.30:0,5,141	1/1:15,20:36:17.36:243,17,0	0/0:14,1:15:2.41:0,2,100	0/0:21,0:21:23.92:0,24,197	0/0:21,0:22:19.19:0,19,251	0/1:12,0:12:1.34:1,0,90	0/0:10,0:10:5.99:0,6,50	0/0:12,0:11:11.97:0,12,98	0/0:10,0:10:14.95:0,15,124	0/0:12,0:12:1.62:0,2,117	0/1:8,18:27:31.62:167,0,32	0/0:25,0:23:47.87:0,48,429	0/1:25,5:30:11.74:12,0,248	0/0:20,0:20:35.01:0,35,292	0/1:11,0:10:9.85:10,0,33	0/0:6,0:6:11.40:0,11,100	0/0:15,0:13:2.91:0,3,93	0/1:7,0:6:10.07:10,0,40	0/0:25,0:25:28.49:0,28,369	1/1:8,12:20:29.33:186,29,0	0/0:18,1:19:4.76:0,5,173	1/1:7,10:17:0.09:126,0,0
chr10	67573971	.	A	ATT	3941.25	PASS	AB=0.708;AC=17;AF=0.304;AN=56;BaseQRankSum=-1.217;DP=491;FS=11.555;HRun=0;HaplotypeScore=87.9366;InbreedingCoeff=0.0577;MQ=74.89;MQ0=8;MQRankSum=1.048;QD=20.01;ReadPosRankSum=1.621;VQSLOD=3.0372;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:30.78:0,31,425	0/1:8,0:7:21.55:22,0,131	0/0:20,0:17:35:0,35,566	0/0:32,0:21:50.82:0,51,684	0/0:10,0:10:18.06:0,18,271	0/0:5,19:24:8.37:0,8,74	1/1:17,0:15:29.44:483,29,0	0/0:33,0:33:81.75:0,82,1251	1/1:17,0:17:24.46:709,24,0	0/1:5,9:14:55.49:408,0,55	0/1:5,6:10:28.88:133,0,29	0/1:3,7:10:33.39:33,0,74	0/0:17,0:17:35.87:0,36,490	0/1:5,0:13:32.68:53,0,33	0/1:11,0:11:20.34:202,0,20	0/1:3,0:12:24.64:25,0,57	0/0:15,0:15:5.97:0,6,56	0/0:19,0:18:43.92:0,44,428	0/1:7,17:25:54.54:784,0,55	0/1:5,10:15:30.43:117,0,30	0/1:10,0:10:20.58:262,0,21	0/0:17,0:17:42.11:0,42,582	0/0:18,0:18:32.89:0,33,459	0/0:28,0:28:67.75:0,68,932	1/1:13,0:13:39.13:565,39,0	0/0:29,0:26:17.04:0,17,767	0/1:5,15:21:13.95:146,0,14	0/0:7,0:7:21.07:0,21,316
chr10	67575682	.	A	AGT	140.48	PASS	AB=0.940;AC=9;AF=0.161;AN=56;BaseQRankSum=0.836;DP=569;FS=1.898;HRun=0;HaplotypeScore=121.2803;InbreedingCoeff=0.1094;MQ=49.22;MQ0=27;MQRankSum=-0.491;QD=0.93;ReadPosRankSum=-0.953;VQSLOD=2.3052;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:18,0:17:23.67:24,0,26	1/1:13,0:12:14.18:99,14,0	0/0:7,0:3:7.98:0,8,60	0/1:16,0:2:2.25:2,0,17	0/1:25,0:24:29.60:36,0,30	0/0:26,0:23:26.50:0,26,342	0/0:19,0:17:26.92:0,27,194	0/1:34,0:32:0.50:0,0,87	0/0:26,0:25:49.01:0,49,343	0/0:34,0:30:64.26:0,64,505	0/0:23,0:23:40.09:0,40,291	0/0:16,0:15:25.19:0,25,168	0/0:22,0:20:44.15:0,44,437	0/0:14,0:13:22.61:0,23,155	0/1:16,0:15:14.03:14,0,191	0/0:17,0:15:23.25:0,23,123	0/1:14,0:14:10.51:50,0,11	0/1:4,10:15:44.53:48,0,45	0/0:16,0:15:19.03:0,19,127	0/0:24,0:23:8.83:0,9,59	0/0:29,0:25:52.37:0,52,417	0/0:20,0:20:35.97:0,36,387	0/0:29,0:26:59.54:0,60,639	0/0:24,0:23:40.91:0,41,387	0/0:20,0:18:29.96:0,30,272	0/0:23,0:22:53.50:0,54,385	0/0:22,0:21:51.32:0,51,406	0/0:7,0:7:7.40:0,7,38
chr10	67575686	.	AGTGAGT	A	2972.49	PASS	AB=1.000;AC=34;AF=0.630;AN=54;BaseQRankSum=-3.035;DP=551;FS=2.180;HRun=0;HaplotypeScore=142.8449;InbreedingCoeff=0.3729;MQ=49.35;MQ0=28;MQRankSum=2.303;QD=7.08;ReadPosRankSum=-0.249;VQSLOD=2.3477;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:17:14.46:0,14,247	0/1:12,0:11:21.54:46,0,22	./.	0/0:8,0:1:1.82:0,2,5	0/0:24,0:23:9.11:0,9,218	1/1:26,0:23:27.19:264,27,0	1/1:21,0:18:17.68:115,18,0	0/1:35,0:33:1.77:2,0,74	1/1:27,0:26:21.13:269,21,0	1/1:10,23:29:35.26:277,35,0	1/1:23,0:23:32.81:245,33,0	1/1:16,0:15:19.10:153,19,0	0/0:21,0:19:2.12:0,2,266	1/1:15,0:14:19.56:142,20,0	1/1:15,0:15:21.28:126,21,0	1/1:17,0:15:29.06:269,29,0	0/0:6,0:13:0.18:0,0,251	0/1:14,0:14:31.64:32,0,120	1/1:8,7:14:6.08:108,6,0	1/1:3,22:24:8.68:47,9,0	1/1:29,0:25:11.70:311,12,0	0/0:19,0:19:23.77:0,24,279	0/1:27,0:24:35.65:36,0,211	0/0:26,0:25:3.10:0,3,254	1/1:20,0:18:32.61:239,33,0	0/1:22,0:21:99:152,0,210	1/1:20,0:19:42.06:291,42,0	0/1:7,0:7:18.59:21,0,19
chr10	67577225	.	GATTTATTT	G	1159.49	PASS	AB=1.000;AC=11;AF=0.262;AN=42;BaseQRankSum=-0.620;DP=251;FS=2.184;HRun=0;HaplotypeScore=64.8482;InbreedingCoeff=0.5281;MQ=58.60;MQ0=4;MQRankSum=-2.366;QD=15.46;ReadPosRankSum=-0.304;VQSLOD=1.8704;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:14,8:20:15.05:378,15,0	0/0:6,0:6:9.03:0,9,307	./.	./.	1/1:5,6:11:12.04:296,12,0	0/0:6,0:13:20.98:0,21,172	./.	0/1:20,0:20:63.04:174,0,63	0/0:2,0:2:3.01:0,3,47	0/0:6,0:9:12.01:0,12,153	./.	1/1:2,1:3:3.01:76,3,0	0/0:6,0:6:6.02:0,6,247	0/0:12,0:13:6.01:0,6,72	0/0:3,0:4:3:0,3,25	./.	0/0:28,0:26:37.68:0,38,977	0/0:16,0:15:24.08:0,24,628	0/0:16,0:16:9:0,9,90	./.	0/0:2,0:3:3:0,3,25	./.	0/0:8,0:8:12.04:0,12,457	0/0:7,0:7:6.02:0,6,247	0/0:3,0:5:3:0,3,25	1/1:4,6:10:18.02:301,18,0	0/0:5,0:7:9:0,9,102	1/1:8,1:9:3.01:76,3,0
chr10	67578281	.	G	GA	991.74	PASS	AB=0.994;AC=14;AF=0.250;AN=56;BaseQRankSum=1.883;DP=570;FS=3.837;HRun=9;HaplotypeScore=75.5678;InbreedingCoeff=0.1878;MQ=68.15;MQ0=10;MQRankSum=-0.947;QD=4.20;ReadPosRankSum=-2.099;VQSLOD=0.0053;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:69.63:0,70,624	0/0:10,0:10:20.80:0,21,144	0/1:44,0:15:11.14:11,0,31	0/0:22,0:8:4.63:0,5,64	0/0:21,0:21:50.63:0,51,419	0/1:19,1:19:9.66:10,0,21	0/1:19,0:19:15.38:15,0,45	1/1:10,17:26:52.50:443,52,0	0/1:23,0:23:10.01:10,0,85	0/0:26,1:27:13.80:0,14,167	0/0:17,0:17:7.81:0,8,65	0/1:18,0:18:23.85:34,0,24	0/0:15,0:15:20.94:0,21,170	0/0:15,0:15:0.99:0,1,83	0/1:23,0:23:18.42:18,0,117	0/0:13,0:13:0.82:0,1,46	0/0:40,0:40:85.81:0,86,582	0/0:18,0:18:38.55:0,39,257	0/0:16,0:16:20.57:0,21,174	0/1:14,0:14:8.89:35,0,9	0/0:11,0:11:9.66:0,10,94	0/0:12,0:12:20.95:0,21,174	0/0:20,0:20:44.76:0,45,375	0/0:16,0:16:22.67:0,23,213	0/0:20,0:20:0.46:0,0,61	1/1:6,14:18:40.87:403,41,0	0/1:19,0:19:4.53:17,0,5	1/1:5,4:9:15.03:159,15,0
chr10	67578290	.	A	AT	3441.58	PASS	AB=0.822;AC=31;AF=0.554;AN=56;BaseQRankSum=-6.875;DP=555;FS=3.699;HRun=13;HaplotypeScore=63.2493;InbreedingCoeff=0.4103;MQ=64.87;MQ0=19;MQRankSum=1.417;QD=9.43;ReadPosRankSum=0.015;VQSLOD=2.8782;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,1:40:22.65:0,23,455	0/0:1,0:10:15.66:0,16,54	0/1:41,0:12:8.44:8,0,14	0/0:20,0:7:8.63:0,9,55	0/0:22,1:23:18.61:0,19,251	1/1:3,17:19:33.04:304,33,0	1/1:4,17:21:27.17:377,27,0	0/1:30,0:28:35.26:35,0,48	1/1:6,16:22:6.29:186,6,0	1/1:10,14:22:17.62:327,18,0	1/1:4,14:19:0.40:217,0,0	1/1:6,13:18:19.50:237,19,0	0/0:9,0:11:14.46:0,14,91	0/1:4,7:11:23.14:82,0,23	0/1:7,12:19:13.17:157,0,13	1/1:5,9:14:7.90:184,8,0	0/0:5,0:38:55.76:0,56,177	0/0:4,0:17:20.36:0,20,59	1/1:10,14:23:11.26:284,11,0	1/1:4,8:12:23.71:195,24,0	0/1:5,6:10:21.36:82,0,21	0/0:8,0:8:17.81:0,18,121	0/0:16,2:19:18.95:0,19,259	0/1:13,0:15:22.34:22,0,149	1/1:3,15:19:38.88:345,39,0	0/1:17,0:16:16.48:50,0,16	1/1:3,16:19:33.03:303,33,0	1/1:5,0:6:3.60:47,4,0
chr10	67578650	.	CA	C	2028.54	PASS	AB=0.885;AC=32;AF=0.571;AN=56;BaseQRankSum=3.302;DP=170;FS=14.824;HRun=1;HaplotypeScore=29.3859;InbreedingCoeff=0.6512;MQ=84.81;MQ0=0;MQRankSum=-4.173;QD=19.89;ReadPosRankSum=-0.007;VQSLOD=2.0340;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:27.09:0,27,382	0/0:3,0:3:9.03:0,9,123	0/0:13,0:10:20.83:0,21,278	0/0:18,0:15:31.60:0,32,379	0/0:1,0:1:2.99:0,3,24	1/1:3,0:3:9.01:106,9,0	1/1:7,3:9:26.37:248,26,0	0/1:7,3:10:3.12:177,0,3	1/1:0,5:5:2.88:42,3,0	1/1:1,3:4:6.01:69,6,0	1/1:0,4:4:3.01:41,3,0	1/1:3,0:3:8.97:85,9,0	0/0:8,0:8:21.05:0,21,279	1/1:4,2:6:14.44:151,14,0	1/1:0,7:7:15:186,15,0	1/1:9,0:9:23.88:243,24,0	0/0:6,0:6:14.62:0,15,140	0/0:2,0:2:6.02:0,6,78	1/1:4,0:4:8.72:74,9,0	1/1:2,0:2:2.68:11,3,0	1/1:0,8:8:9.03:125,9,0	0/0:4,0:4:12.01:0,12,136	0/0:3,0:3:9.03:0,9,128	0/0:1,0:1:3.01:0,3,43	0/1:5,0:5:7.67:35,0,8	1/1:8,1:8:20.99:227,21,0	1/1:9,2:11:20.41:360,20,0	1/1:0,2:2:3.01:42,3,0
chr10	67579250	.	AT	A	1218.16	PASS	AC=4;AF=0.077;AN=52;BaseQRankSum=5.070;DP=569;FS=0.000;HRun=1;HaplotypeScore=70.0792;InbreedingCoeff=0.9935;MQ=44.35;MQ0=47;MQRankSum=2.725;QD=20.30;ReadPosRankSum=1.517;VQSLOD=3.7432;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,26:23:57.19:796,57,0	0/0:14,0:14:36.12:0,36,565	./.	./.	1/1:0,34:34:39.10:542,39,0	0/0:26,0:26:42.13:0,42,648	0/0:13,0:10:18.02:0,18,259	0/0:30,0:20:60.19:0,60,934	0/0:16,0:15:36.12:0,36,575	0/0:24,0:24:72.25:0,72,1149	0/0:23,0:23:45.13:0,45,673	0/0:17,0:17:42.14:0,42,669	0/0:19,0:19:36.12:0,36,573	0/0:12,0:12:33.11:0,33,527	0/0:19,0:19:48.16:0,48,763	0/0:22,0:22:57.19:0,57,908	0/0:24,0:23:48.15:0,48,743	0/0:26,0:25:39.13:0,39,622	0/0:10,0:10:30.09:0,30,456	0/0:23,0:23:51.17:0,51,812	0/0:21,0:17:33.11:0,33,527	0/0:23,0:23:38.82:0,39,622	0/0:17,0:17:23.74:0,24,357	0/0:19,0:16:45.14:0,45,693	0/0:19,0:19:39.01:0,39,622	0/0:27,0:27:81.28:0,81,1293	0/0:35,0:34:81.26:0,81,1268	0/0:13,0:10:30.09:0,30,455
chr10	67579667	.	A	AT	1176.16	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-5.170;DP=526;FS=1.194;HRun=10;HaplotypeScore=53.2523;InbreedingCoeff=0.9667;MQ=70.01;MQ0=0;MQRankSum=0.029;QD=21.38;ReadPosRankSum=0.214;VQSLOD=4.4269;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,30:35:83.73:836,84,0	0/0:9,0:9:14.97:0,15,123	0/0:9,0:10:16.95:0,17,119	0/0:9,0:10:21.44:0,21,173	1/1:3,17:19:26.40:462,26,0	0/0:13,0:13:35.95:0,36,296	0/0:21,1:22:15.94:0,16,337	0/0:20,0:20:38.92:0,39,320	0/0:18,0:18:38.91:0,39,320	0/0:28,0:28:65.89:0,66,542	0/0:13,0:13:29.96:0,30,246	0/0:14,0:14:32.95:0,33,271	0/0:15,0:15:35.01:0,35,294	0/0:20,0:20:59.91:0,60,489	0/0:17,0:17:47.94:0,48,394	0/0:14,0:14:41.93:0,42,341	0/0:27,1:28:36.89:0,37,503	0/0:16,0:16:38.94:0,39,320	0/0:22,1:24:14.96:0,15,319	0/0:24,0:24:59.92:0,60,493	0/0:19,0:20:43.97:0,44,351	0/0:28,0:28:68.88:0,69,562	0/0:24,0:24:53.91:0,54,443	0/0:21,0:21:59.93:0,60,493	0/0:14,0:14:29.96:0,30,246	0/0:17,0:17:41.95:0,42,345	0/0:21,1:22:21.94:0,22,386	0/0:10,0:10:29.96:0,30,246
chr10	67580193	.	T	TTGTGTGTGTGTGTG	2443.11	PASS	AB=0.613;AC=18;AF=0.321;AN=56;BaseQRankSum=-2.999;DP=725;FS=0.498;HRun=0;HaplotypeScore=266.3877;InbreedingCoeff=0.2875;MQ=63.57;MQ0=15;MQRankSum=-5.157;QD=8.06;ReadPosRankSum=-6.263;VQSLOD=0.9167;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:54:65.05:0,65,370	1/1:0,4:6:3.01:201,3,0	0/0:44,0:23:19.10:0,19,352	0/0:36,0:20:13.40:0,13,121	0/1:7,0:34:29.59:30,0,154	0/1:5,0:24:8.80:9,0,189	0/0:8,0:31:26.19:0,26,240	1/1:25,0:25:24.23:277,24,0	0/0:10,0:21:11.53:0,12,68	0/1:9,0:24:99:137,0,104	0/1:3,0:19:4.90:5,0,64	0/0:5,0:22:29:0,29,182	0/0:23,0:23:53.18:0,53,1644	0/0:5,0:27:40.77:0,41,287	0/0:2,0:17:26.15:0,26,148	0/0:4,0:12:8.77:0,9,51	1/1:31,0:31:42.50:1099,43,0	1/1:4,13:23:9.03:347,9,0	0/1:17,0:25:78.18:78,0,79	0/1:9,0:22:17.90:18,0,31	0/1:8,0:37:12.63:13,0,119	0/0:14,0:16:20.17:0,20,1269	0/0:27,0:27:59.96:0,60,1853	0/0:52,0:53:99:0,117,3330	0/0:4,0:19:26.32:0,26,191	0/1:15,0:26:72.86:345,0,73	0/0:5,0:16:18.30:0,18,96	1/1:2,0:3:6.01:61,6,0
chr10	67580228	.	C	CGTGTGT	2428.62	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=-1.556;DP=707;FS=9.107;HRun=0;HaplotypeScore=179.1593;InbreedingCoeff=0.5063;MQ=56.01;MQ0=13;MQRankSum=-5.870;QD=17.22;ReadPosRankSum=-2.386;VQSLOD=2.1453;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:65.68:0,66,1249	0/1:10,0:10:33.04:33,0,325	0/0:31,0:15:22.70:0,23,297	0/1:48,0:18:1.67:2,0,207	0/0:33,0:33:28.61:0,29,844	0/0:19,0:18:0.76:0,1,411	0/0:28,0:28:42.10:0,42,865	1/1:7,18:27:33.90:982,34,0	0/0:13,0:14:9.64:0,10,485	0/0:18,0:18:27.05:0,27,494	0/0:21,0:22:23.38:0,23,643	0/0:18,0:18:30.06:0,30,487	0/0:21,0:21:39.11:0,39,771	0/0:23,0:23:33.10:0,33,557	0/0:15,0:15:17.97:0,18,278	0/0:8,0:8:20.96:0,21,322	0/0:32,0:32:56.19:0,56,1102	0/1:21,0:22:19.09:19,0,475	0/0:22,0:21:5.08:0,5,525	0/0:23,0:23:19.95:0,20,649	0/0:49,0:45:74.23:0,74,1171	0/0:17,0:17:36.05:0,36,585	0/0:26,0:26:54.13:0,54,1185	0/0:57,0:57:99:0,134,2568	0/0:25,0:25:39.07:0,39,737	1/1:8,16:27:54.17:1436,54,0	0/0:13,0:13:24.07:0,24,461	1/1:2,2:4:3.01:100,3,0
chr10	67581056	.	C	CATTT	21984.68	PASS	AB=0.931;AC=29;AF=0.518;AN=56;BaseQRankSum=-15.853;DP=619;FS=0.000;HRun=0;HaplotypeScore=91.4006;InbreedingCoeff=0.9279;MQ=76.11;MQ0=0;MQRankSum=-6.900;QD=63.91;ReadPosRankSum=3.745;VQSLOD=6.9615;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:51.17:0,51,950	0/0:14,0:14:36.12:0,36,672	0/0:15,0:15:36.12:0,36,659	0/0:16,0:16:36.12:0,36,666	0/0:28,0:28:66.23:0,66,1231	1/1:0,22:24:60.21:1537,60,0	1/1:6,21:27:72.25:1794,72,0	0/0:18,0:18:45.15:0,45,812	1/1:3,29:33:90.31:2358,90,0	1/1:2,24:26:72.25:1919,72,0	1/1:2,14:16:42.14:1051,42,0	1/1:0,23:23:63.22:1680,63,0	0/0:28,0:28:81.24:0,81,1444	1/1:1,20:21:57.20:1448,57,0	1/1:0,22:22:63.22:1679,63,0	1/1:1,21:23:66.23:1740,66,0	0/0:35,0:35:93.30:0,93,1687	0/0:17,0:17:45.14:0,45,807	1/1:6,11:17:42.14:1087,42,0	1/1:1,20:21:57.20:1475,57,0	1/1:2,19:22:51.17:1270,51,0	0/0:26,0:26:72.25:0,72,1341	0/0:16,0:16:45.15:0,45,830	0/0:32,0:31:84.24:0,84,1510	1/1:1,23:26:66.23:1665,66,0	0/1:25,2:27:84.86:85,0,1213	1/1:1,13:16:45.15:1198,45,0	0/0:9,0:9:21.07:0,21,387
chr10	67581142	.	AACACACAC	A	1435.29	PASS	AB=0.742;AC=25;AF=0.521;AN=48;BaseQRankSum=2.364;DP=444;FS=11.697;HRun=0;HaplotypeScore=121.8825;InbreedingCoeff=0.5403;MQ=59.83;MQ0=23;MQRankSum=-4.831;QD=8.34;ReadPosRankSum=1.733;VQSLOD=1.9002;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:24:8.98:0,9,73	0/1:9,0:11:9.92:10,0,18	./.	./.	0/1:12,0:19:0.93:1,0,82	0/0:17,0:14:3.01:0,3,37	0/0:21,1:21:0.47:0,0,1	./.	1/1:9,2:9:6.02:122,6,0	1/1:15,0:11:2.99:23,3,0	1/1:10,4:14:12.25:298,12,0	1/1:7,0:8:3.01:56,3,0	0/0:11,0:14:19.86:0,20,484	1/1:2,2:5:6.02:149,6,0	1/1:7,2:9:6.02:133,6,0	1/1:12,2:13:5.97:94,6,0	0/0:16,0:18:8.99:0,9,78	0/0:11,0:14:9.48:0,9,134	./.	1/1:13,2:15:9:170,9,0	1/1:9,0:8:3.41:18,3,0	0/0:10,0:14:12.04:0,12,369	0/0:17,0:17:9.02:0,9,246	0/0:29,0:28:42.11:0,42,1347	1/1:22,3:25:12.04:258,12,0	0/0:19,0:21:32.30:0,32,609	1/1:7,3:10:12.04:261,12,0	0/1:2,0:4:6.79:7,0,178
chr10	67583023	.	A	AATAG	9149.71	PASS	AB=1.000;AC=43;AF=0.827;AN=52;BaseQRankSum=-4.374;DP=753;FS=3.743;HRun=0;HaplotypeScore=122.7027;InbreedingCoeff=0.8335;MQ=59.38;MQ0=12;MQRankSum=1.622;QD=14.83;ReadPosRankSum=-1.028;VQSLOD=4.4293;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:22:0.47:1,0,0	1/1:2,0:10:9:78,9,0	./.	./.	0/1:41,0:41:0:0,0,0	1/1:11,16:27:21.07:489,21,0	1/1:18,0:18:27.09:495,27,0	1/1:50,0:48:43.89:275,44,0	1/1:11,13:25:12.04:284,12,0	1/1:17,22:42:78.10:1453,78,0	1/1:10,22:34:8.73:215,9,0	1/1:6,21:29:15.05:359,15,0	0/0:24,0:24:54.17:0,54,834	1/1:6,17:25:15.05:358,15,0	1/1:7,18:28:15.05:359,15,0	1/1:9,15:26:12.04:287,12,0	1/1:20,0:21:9.72:61,10,0	1/1:20,0:18:17.95:169,18,0	1/1:14,7:18:22.30:391,22,0	1/1:18,25:44:57.07:1016,57,0	1/1:9,23:32:18.06:431,18,0	0/0:22,0:22:28.60:0,29,384	0/0:24,0:24:49.40:0,49,733	0/0:13,0:13:18.05:0,18,265	1/1:5,22:27:18.06:431,18,0	1/1:9,20:30:63.18:1280,63,0	1/1:7,20:28:9.03:215,9,0	1/1:3,12:17:21.07:502,21,0
chr10	67583048	.	ATAGATAGG	A	409.11	PASS	AB=1.000;AC=8;AF=0.148;AN=54;BaseQRankSum=0.452;DP=707;FS=4.839;HRun=0;HaplotypeScore=183.5698;InbreedingCoeff=0.3889;MQ=58.56;MQ0=5;MQRankSum=-1.046;QD=2.10;ReadPosRankSum=-4.591;VQSLOD=1.3537;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:3,27:30:17.97:226,18,0	0/0:9,0:9:12.01:0,12,115	0/0:19,0:10:26.95:0,27,234	./.	1/1:5,29:34:14.79:189,15,0	0/0:24,0:24:30.08:0,30,851	0/0:22,0:22:22.49:0,22,739	0/1:50,0:47:92.26:92,0,1101	0/0:22,0:22:27.08:0,27,662	0/1:37,0:36:16.34:16,0,1748	0/0:38,0:38:37.68:0,38,709	0/0:27,0:27:27.03:0,27,640	0/0:22,0:22:63.18:0,63,2322	0/0:22,0:22:21.03:0,21,570	0/0:31,0:31:45.06:0,45,873	0/0:22,0:22:27.04:0,27,588	0/1:15,0:15:11.17:11,0,182	0/0:19,0:17:36.91:0,37,358	0/0:15,0:15:7.91:0,8,406	0/0:36,0:36:12.10:0,12,1343	0/0:32,0:32:42.06:0,42,926	0/0:24,0:24:62.74:0,63,1397	0/0:24,0:24:67.40:0,67,2035	0/0:15,0:15:33.08:0,33,912	0/0:28,0:28:33.07:0,33,826	0/1:29,0:29:16.69:17,0,1526	0/0:30,0:30:27.03:0,27,526	0/0:20,0:20:33.08:0,33,871
chr10	67583630	.	GGCAT	G	15118.70	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=11.569;DP=557;FS=3.215;HRun=0;HaplotypeScore=98.7304;InbreedingCoeff=0.9965;MQ=80.11;MQ0=1;MQRankSum=-4.931;QD=39.68;ReadPosRankSum=3.977;VQSLOD=5.0363;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,108,2395	1/1:3,10:13:30.10:534,30,0	0/0:19,0:19:36.12:0,36,815	0/0:17,0:17:33.02:0,33,633	0/0:16,0:16:45.15:0,45,1122	1/1:2,12:14:30.10:534,30,0	1/1:3,15:18:33.11:587,33,0	1/1:5,11:16:33.10:557,33,0	1/1:1,25:26:63.22:1122,63,0	1/1:3,20:23:63.19:1081,63,0	1/1:2,15:17:39.13:694,39,0	1/1:3,16:19:39.13:694,39,0	0/0:22,0:22:60.21:0,60,1548	1/1:3,13:17:36.08:607,36,0	1/1:2,13:15:36.12:641,36,0	1/1:1,14:15:39.13:694,39,0	1/1:1,23:24:54.18:961,54,0	1/1:8,21:29:63.22:1122,63,0	1/1:9,7:16:16.98:364,17,0	1/1:2,27:29:69.24:1228,69,0	1/1:2,21:22:48.16:855,48,0	0/0:13,0:13:36.12:0,36,929	0/0:15,0:15:45.15:0,45,1157	0/0:31,0:31:87.03:0,87,1848	1/1:2,21:23:57.15:981,57,0	1/1:3,11:14:33.11:581,33,0	1/1:3,20:24:54.18:961,54,0	1/1:0,6:6:18.06:320,18,0
chr10	67585954	.	A	AGAGT	5450.61	PASS	AB=1.000;AC=38;AF=0.679;AN=56;BaseQRankSum=-6.920;DP=577;FS=48.679;HRun=0;HaplotypeScore=119.4082;InbreedingCoeff=0.3804;MQ=67.89;MQ0=10;MQRankSum=-2.350;QD=12.44;ReadPosRankSum=3.601;VQSLOD=2.4753;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:23:24.56:82,0,25	1/1:7,0:7:2.80:78,3,0	0/0:29,0:20:34.09:0,34,369	0/0:45,0:23:29.91:0,30,296	1/1:17,0:17:32.45:292,32,0	1/1:11,0:10:6.90:71,7,0	1/1:18,0:18:6.35:195,6,0	1/1:36,0:35:86:744,86,0	0/1:19,0:19:36.91:220,0,37	1/1:21,0:20:22.36:316,22,0	1/1:22,0:22:33.54:384,34,0	1/1:9,16:26:6.02:121,6,0	0/0:22,0:22:49.61:0,50,505	1/1:27,0:27:50.30:432,50,0	0/1:26,0:26:75.24:286,0,75	1/1:16,0:16:29.90:250,30,0	1/1:16,0:16:0.68:152,1,0	1/1:13,0:13:29.81:251,30,0	1/1:12,0:12:10.42:210,10,0	1/1:31,0:31:37.66:425,38,0	0/1:23,0:23:59.95:270,0,60	0/0:15,0:15:30:0,30,279	0/0:9,0:9:14.62:0,15,124	0/0:18,0:18:44.89:0,45,449	1/1:17,0:17:5.79:49,6,0	0/1:24,0:23:99:251,0,109	0/1:29,0:29:99:346,0,129	1/1:3,0:3:4.79:26,5,0
chr10	67585958	.	TGA	T	185.44	PASS	AB=0.946;AC=14;AF=0.259;AN=54;BaseQRankSum=0.923;DP=577;FS=9.114;HRun=0;HaplotypeScore=108.8090;InbreedingCoeff=-0.2283;MQ=65.17;MQ0=10;MQRankSum=0.967;QD=0.68;ReadPosRankSum=0.263;VQSLOD=1.5295;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:17.92:0,18,146	0/0:7,0:7:3:0,3,29	./.	0/0:44,0:21:0:0,0,1	0/1:15,0:15:2.88:3,0,77	1/1:9,1:9:3.01:32,3,0	0/1:18,1:19:17.28:17,0,104	0/0:38,0:37:1.36:0,1,2	0/1:17,1:19:23.29:23,0,69	0/0:22,0:21:3.01:0,3,31	0/1:21,1:22:26.32:26,0,27	0/0:26,0:25:6.01:0,6,71	0/1:24,1:25:21.64:22,0,256	0/0:28,0:28:11.94:0,12,91	0/1:24,1:26:16.95:17,0,207	0/1:15,0:15:5.41:5,0,27	0/0:16,0:16:11.93:0,12,104	0/0:13,0:13:5.96:0,6,43	0/0:13,0:13:6.01:0,6,59	0/1:27,2:29:23.29:23,0,59	0/1:21,1:22:20.66:21,0,70	0/1:14,1:15:13.11:70,0,13	0/0:13,0:13:4.24:0,4,28	0/0:17,0:17:12.04:0,12,177	0/0:13,0:13:2.97:0,3,20	0/1:21,3:23:40.89:41,0,150	0/1:28,1:30:19.34:19,0,236	0/0:5,0:5:0.47:0,0,1
chr10	67585960	.	A	AGT	5494.28	PASS	AB=0.947;AC=36;AF=0.643;AN=56;BaseQRankSum=-5.827;DP=585;FS=44.339;HRun=0;HaplotypeScore=99.3389;InbreedingCoeff=0.3468;MQ=63.72;MQ0=11;MQRankSum=0.164;QD=12.46;ReadPosRankSum=4.858;VQSLOD=2.6477;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:6,17:23:0.32:203,0,0	1/1:3,4:7:2.81:36,3,0	0/0:27,0:18:34.16:0,34,375	0/0:44,0:21:26.93:0,27,282	1/1:14,1:15:35.66:342,36,0	1/1:11,0:10:11.66:85,12,0	0/1:18,0:18:21.70:190,0,22	1/1:38,0:37:75.78:712,76,0	0/1:19,0:19:8.32:229,0,8	1/1:22,0:21:34.21:326,34,0	1/1:22,0:22:45.44:398,45,0	1/1:24,1:23:4.37:32,4,0	0/0:25,0:25:51.15:0,51,569	1/1:29,0:29:31.79:411,32,0	1/1:26,0:26:2.42:305,2,0	1/1:16,0:16:19.24:236,19,0	0/1:16,0:16:12.62:163,0,13	1/1:14,0:14:10.88:229,11,0	0/1:16,0:16:2.86:192,0,3	1/1:27,0:27:22.13:418,22,0	0/1:25,0:25:36.71:274,0,37	0/0:16,0:16:28.22:0,28,243	0/0:14,0:14:19.23:0,19,153	0/0:18,0:18:47.88:0,48,455	1/1:2,12:14:2.86:58,3,0	0/1:24,0:23:4.77:264,0,5	0/1:29,0:29:44.54:364,0,45	1/1:5,0:5:4.79:26,5,0
chr10	67586527	.	GTT	G	4930.13	PASS	AB=0.663;AC=31;AF=0.554;AN=56;BaseQRankSum=-2.695;DP=549;FS=1.233;HRun=13;HaplotypeScore=79.3565;InbreedingCoeff=0.6471;MQ=75.46;MQ0=5;MQRankSum=0.073;QD=13.66;ReadPosRankSum=2.535;VQSLOD=3.9815;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:93.03:0,93,1237	0/0:3,0:7:10.45:0,10,45	0/0:33,0:22:10.34:0,10,190	0/1:27,0:20:1.87:2,0,184	0/0:18,0:24:45.82:0,46,525	1/1:2,11:14:26.95:311,27,0	1/1:7,11:19:20.94:253,21,0	0/1:11,2:32:7.63:8,0,99	1/1:6,15:21:45.03:436,45,0	1/1:5,25:29:72.07:693,72,0	1/1:2,18:21:46.63:487,47,0	1/1:1,13:14:33.03:314,33,0	0/0:13,0:15:44.61:0,45,581	1/1:5,12:18:35.77:332,36,0	1/1:6,12:18:32.99:320,33,0	1/1:6,5:12:11.29:81,11,0	0/1:4,1:21:18.03:18,0,73	0/0:3,0:20:11.03:0,11,76	0/1:8,12:20:10.44:300,0,10	1/1:8,15:24:38.89:419,39,0	1/1:4,5:12:20.24:152,20,0	0/0:15,0:16:36.11:0,36,498	0/0:8,0:8:15.05:0,15,217	0/0:7,0:7:6.02:0,6,87	1/1:2,13:16:32.98:370,33,0	0/1:3,2:21:14.56:15,0,100	1/1:3,15:19:44.80:419,45,0	0/0:1,0:16:32.44:0,32,111
chr10	67587236	.	G	GA	8651.64	PASS	AB=0.558;AC=39;AF=0.696;AN=56;BaseQRankSum=-7.818;DP=553;FS=4.591;HRun=9;HaplotypeScore=57.5204;InbreedingCoeff=0.9348;MQ=68.71;MQ0=4;MQRankSum=0.022;QD=22.24;ReadPosRankSum=1.892;VQSLOD=5.8800;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:68.95:0,69,593	1/1:4,0:12:17.81:111,18,0	0/0:24,0:14:26.83:0,27,227	0/0:14,0:12:13.92:0,14,163	0/0:26,0:26:77.97:0,78,673	1/1:2,18:20:48.13:531,48,0	1/1:5,22:27:51.14:564,51,0	1/1:3,27:30:78.19:853,78,0	1/1:1,20:21:45.12:498,45,0	1/1:4,12:16:36.10:398,36,0	1/1:2,21:23:60.12:646,60,0	1/1:1,10:11:27.07:297,27,0	0/0:23,0:23:44.99:0,45,479	0/1:5,19:24:3.19:356,0,3	1/1:1,11:12:29.91:313,30,0	1/1:0,16:16:39.11:431,39,0	1/1:0,1:23:56.98:303,57,0	1/1:2,0:19:42.52:211,43,0	1/1:5,24:28:23.14:709,23,0	1/1:5,10:15:30.08:330,30,0	1/1:1,8:9:24.06:266,24,0	0/0:12,0:12:32.99:0,33,286	0/0:22,0:22:53.98:0,54,468	0/0:18,0:18:50.99:0,51,442	1/1:2,18:21:47.96:512,48,0	1/1:3,21:24:60.16:664,60,0	1/1:2,22:25:47.96:512,48,0	1/1:4,7:11:17.60:147,18,0
chr10	67589484	.	GT	G	2303.44	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.672;DP=727;FS=4.280;HRun=4;HaplotypeScore=71.0009;InbreedingCoeff=0.9994;MQ=82.43;MQ0=0;MQRankSum=-1.070;QD=30.71;ReadPosRankSum=2.469;VQSLOD=4.3356;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,150,2044	1/1:0,10:10:27.08:323,27,0	0/0:24,0:24:57.18:0,57,783	0/0:21,0:21:54.18:0,54,724	0/0:29,0:29:84.27:0,84,1157	0/0:21,0:21:63.20:0,63,863	0/0:32,0:32:96.31:0,96,1325	0/0:21,0:21:60.18:0,60,808	0/0:24,0:24:72.24:0,72,1005	0/0:21,0:21:60.20:0,60,840	0/0:18,0:18:54.18:0,54,756	0/0:21,0:21:63.20:0,63,863	0/0:21,0:21:63.20:0,63,864	0/0:33,0:33:99:0,99,1368	0/0:23,0:23:66.17:0,66,870	0/0:23,0:23:66.19:0,66,888	1/1:0,38:38:99:1332,111,0	1/1:0,27:27:66.20:792,66,0	0/0:18,0:18:54.17:0,54,738	0/0:22,0:22:60.16:0,60,800	0/0:35,0:35:94.45:0,94,1338	0/0:31,0:31:93.27:0,93,1236	0/0:21,0:21:60.19:0,60,823	0/0:33,0:33:99:0,99,1351	0/0:36,0:36:99:0,108,1477	0/0:31,0:31:93.29:0,93,1271	0/0:32,0:32:87.23:0,87,1178	0/0:10,0:10:30.10:0,30,420
chr10	67590283	.	G	GA	1140.30	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=0.777;DP=537;FS=0.000;HRun=6;HaplotypeScore=58.1656;InbreedingCoeff=0.8275;MQ=66.95;MQ0=5;MQRankSum=0.203;QD=21.12;ReadPosRankSum=1.649;VQSLOD=2.8648;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:22,9:31:60.12:700,60,0	0/0:8,0:8:21.04:0,21,213	0/0:48,0:19:11.30:0,11,268	0/0:22,0:10:5.99:0,6,53	1/1:5,17:23:51.08:561,51,0	0/0:17,0:17:20.90:0,21,207	0/0:16,0:16:33:0,33,312	0/0:36,0:36:69.01:0,69,680	0/0:14,0:14:29.63:0,30,297	0/0:18,0:18:39.06:0,39,386	0/0:21,0:21:38.99:0,39,365	0/0:13,0:13:20.82:0,21,205	0/0:11,0:11:18.01:0,18,174	0/0:13,0:13:21.02:0,21,202	0/0:24,0:24:36.04:0,36,351	0/0:10,0:10:15.02:0,15,147	0/0:34,0:34:52.56:0,53,477	0/0:18,0:18:35.73:0,36,352	0/0:22,0:22:45.01:0,45,431	0/0:21,0:21:42.07:0,42,417	0/0:8,0:8:14.96:0,15,151	0/0:15,0:15:36.07:0,36,363	0/0:14,0:14:33.07:0,33,334	0/0:13,0:12:27.04:0,27,270	0/0:19,0:19:36.05:0,36,352	0/0:21,0:21:28.96:0,29,282	0/0:22,0:21:14.98:0,15,152	0/0:4,0:4:3:0,3,30
chr10	67590926	.	G	GA	1624.80	PASS	AB=0.859;AC=39;AF=0.750;AN=52;BaseQRankSum=2.176;DP=347;FS=17.632;HRun=14;HaplotypeScore=84.2987;InbreedingCoeff=0.1647;MQ=40.78;MQ0=33;MQRankSum=-0.579;QD=5.24;ReadPosRankSum=-3.451;VQSLOD=-0.0522;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:20,3:20:11.32:68,0,11	1/1:5,1:6:14.87:105,15,0	./.	./.	1/1:10,4:14:14.84:108,15,0	1/1:6,4:10:5.35:74,5,0	1/1:13,2:13:14.90:115,15,0	0/1:12,1:14:22.52:23,0,30	1/1:8,1:9:5.94:45,6,0	1/1:6,1:8:8.80:60,9,0	0/1:8,6:13:10.24:33,0,10	1/1:7,1:8:8.79:57,9,0	0/0:10,0:8:11.62:0,12,76	0/1:13,8:16:37.75:38,0,40	1/1:8,2:10:3.89:28,4,0	1/1:2,2:4:2.97:20,3,0	1/1:22,3:20:4.79:147,5,0	0/1:12,3:14:3.05:83,0,3	0/1:12,1:11:15.64:32,0,16	1/1:12,5:15:26.43:190,26,0	1/1:3,3:5:6:53,6,0	0/0:11,0:11:14.69:0,15,96	0/0:8,0:6:8.77:0,9,57	0/1:13,0:11:12.43:14,0,12	1/1:12,3:15:14.98:125,15,0	1/1:9,4:11:17.85:137,18,0	1/1:15,9:23:11.27:175,11,0	1/1:7,0:4:8.73:53,9,0
chr10	67592390	.	T	TAA	2513.75	PASS	AB=0.740;AC=40;AF=0.714;AN=56;BaseQRankSum=-0.334;DP=445;FS=4.238;HRun=16;HaplotypeScore=85.2154;InbreedingCoeff=0.3650;MQ=74.29;MQ0=7;MQRankSum=-1.362;QD=8.16;ReadPosRankSum=-1.218;VQSLOD=1.1236;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,7:29:32.81:332,33,0	1/1:3,1:4:6.02:72,6,0	0/0:46,0:16:1.83:0,2,49	0/0:57,0:19:3.77:0,4,14	1/1:11,6:18:6.46:223,6,0	1/1:3,3:12:14.38:140,14,0	1/1:3,5:8:4.41:14,4,0	0/1:22,1:31:45.85:88,0,46	1/1:4,5:10:2.95:37,3,0	1/1:10,8:21:20.33:183,20,0	1/1:3,5:8:12.03:141,12,0	1/1:8,2:11:6.02:72,6,0	0/0:5,0:5:5.82:0,6,45	1/1:2,3:8:15.04:171,15,0	1/1:7,2:12:5.38:46,5,0	0/1:5,2:7:10.51:62,0,11	1/1:13,2:21:9.90:211,10,0	1/1:0,5:10:9.03:105,9,0	1/1:11,4:21:45.82:360,46,0	1/1:7,2:12:12.76:89,13,0	1/1:2,2:4:8.39:82,8,0	0/0:7,0:7:5.89:0,6,42	0/0:9,0:9:4.01:0,4,41	0/0:9,0:9:14.16:0,14,90	1/1:5,8:15:6.24:128,6,0	0/1:13,0:22:4.92:72,0,5	0/1:7,5:12:16.16:31,0,16	1/1:2,0:6:4.87:17,5,0
chr10	67592520	.	CCCA	C	331.30	PASS	AB=0.863;AC=25;AF=0.463;AN=54;BaseQRankSum=-4.746;DP=255;FS=0.905;HRun=0;HaplotypeScore=37.0964;InbreedingCoeff=0.4436;MQ=79.96;MQ0=23;MQRankSum=-0.317;QD=2.83;ReadPosRankSum=-1.568;VQSLOD=0.8893;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:16:25.58:0,26,135	0/0:6,0:5:14.28:0,14,84	0/0:54,0:14:34.43:0,34,370	0/1:50,0:18:2.91:3,0,182	0/0:8,0:7:14.18:0,14,100	1/1:9,0:9:0.97:4,1,0	0/0:7,0:6:0:0,0,0	1/1:6,0:5:9:78,9,0	1/1:3,0:2:2.50:9,2,0	1/1:2,0:2:3:26,3,0	0/1:3,7:10:22.93:41,0,23	1/1:2,0:2:5.67:35,6,0	0/0:2,0:2:3:0,3,25	1/1:2,0:1:2.99:23,3,0	1/1:7,0:7:6.84:66,7,0	1/1:4,0:3:0.47:1,0,0	0/0:16,0:15:34.65:0,35,257	0/0:8,0:7:6.25:0,6,24	1/1:2,0:2:5.98:47,6,0	0/1:7,0:6:6.89:7,0,23	0/0:3,0:2:0:0,0,0	./.	0/0:2,0:2:6:0,6,52	0/0:4,0:3:9.03:0,9,141	1/1:4,4:8:2.84:46,3,0	1/1:5,0:5:11.99:103,12,0	0/0:7,0:7:2.64:0,3,29	0/0:3,0:3:5.75:0,6,44
chr10	67592521	.	CCA	C	407.17	PASS	AB=1.000;AC=27;AF=0.500;AN=54;BaseQRankSum=-3.510;DP=260;FS=7.323;HRun=0;HaplotypeScore=34.8956;InbreedingCoeff=0.4799;MQ=79.92;MQ0=23;MQRankSum=-0.330;QD=3.28;ReadPosRankSum=-0.295;VQSLOD=0.0265;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:16:22.25:0,22,160	0/0:6,0:5:14.83:0,15,106	0/0:54,0:14:17.47:0,17,247	0/1:50,0:18:5.35:5,0,121	0/0:8,0:7:10.83:0,11,89	1/1:3,6:9:1.67:5,2,0	0/0:1,6:6:0:0,0,0	1/1:6,0:5:9:78,9,0	1/1:1,2:2:3.01:40,3,0	1/1:2,0:2:3:26,3,0	0/1:9,0:9:16.04:20,0,16	1/1:2,0:2:5.67:35,6,0	0/0:3,0:3:9:0,9,78	1/1:1,1:1:2.97:20,3,0	1/1:2,5:7:8.94:73,9,0	1/1:1,3:3:2.94:18,3,0	0/0:16,0:15:35.53:0,36,268	0/0:7,0:6:6.26:0,6,37	1/1:2,0:2:5.98:47,6,0	0/1:8,0:7:6.98:7,0,11	./.	0/0:2,0:2:3:0,3,28	0/0:5,0:5:15:0,15,132	0/0:5,0:4:12:0,12,128	1/1:6,2:8:2.94:24,3,0	1/1:6,0:6:14.99:129,15,0	1/1:2,4:6:5.88:49,6,0	0/0:3,0:3:1.45:0,1,15
chr10	67594458	.	C	CAGAG	3209.94	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-8.632;DP=676;FS=6.885;HRun=0;HaplotypeScore=105.5828;InbreedingCoeff=0.9928;MQ=89.21;MQ0=0;MQRankSum=-2.419;QD=58.36;ReadPosRankSum=2.224;VQSLOD=4.9774;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,148,2744	1/1:1,7:8:15.05:400,15,0	0/0:28,0:28:57.17:0,57,979	0/0:23,0:23:47.69:0,48,938	0/0:20,0:20:54.19:0,54,1000	0/0:29,0:29:75.26:0,75,1377	0/0:25,0:25:72.22:0,72,1271	0/0:29,0:29:75.25:0,75,1348	0/0:28,0:28:78.27:0,78,1435	0/0:19,0:19:54.19:0,54,1008	0/0:18,0:18:48.16:0,48,886	0/0:28,0:28:63.20:0,63,1125	0/0:15,0:15:45.15:0,45,839	0/0:20,0:20:45.14:0,45,809	0/0:30,0:30:84.26:0,84,1469	0/0:32,0:32:96.29:0,96,1728	1/1:5,26:31:75.26:1992,75,0	1/1:1,13:15:36.12:959,36,0	0/0:23,0:23:63.22:0,63,1146	0/0:30,0:30:90.29:0,90,1647	0/0:23,0:23:69.24:0,69,1273	0/0:25,0:25:69.24:0,69,1280	0/0:24,0:24:66.23:0,66,1230	0/0:24,0:24:72.23:0,72,1288	0/0:19,0:19:54.18:0,54,988	0/0:28,0:28:81.23:0,81,1481	0/0:25,0:24:69.22:0,69,1256	0/0:7,0:7:21.07:0,21,392
chr10	67595476	.	ATATTTTATTT	A	2704.22	PASS	AC=26;AF=0.591;AN=44;BaseQRankSum=0.317;DP=311;FS=2.035;HRun=0;HaplotypeScore=94.3788;InbreedingCoeff=0.6351;MQ=63.05;MQ0=6;MQRankSum=-1.979;QD=18.03;ReadPosRankSum=1.023;VQSLOD=1.8864;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:9:9.03:0,9,272	0/0:5,0:5:12.04:0,12,475	0/0:24,0:9:6.46:0,6,29	0/0:50,0:20:13.75:0,14,198	0/0:5,0:5:3.01:0,3,144	1/1:12,12:25:33.11:965,33,0	1/1:3,2:4:3.01:90,3,0	1/1:36,0:36:2.64:128,3,0	0/0:4,0:7:12.02:0,12,121	./.	./.	1/1:3,2:5:6.02:179,6,0	./.	1/1:2,4:6:6.02:179,6,0	1/1:2,2:4:6.02:179,6,0	1/1:1,3:4:6.02:179,6,0	0/0:13,0:18:21.07:0,21,760	0/0:11,0:11:9.03:0,9,325	1/1:12,4:15:12.04:285,12,0	1/1:5,2:7:3.01:90,3,0	./.	./.	0/0:2,0:2:3.01:0,3,148	./.	1/1:5,4:9:3.01:90,3,0	1/1:8,0:8:4.73:70,5,0	1/1:6,4:10:12.04:358,12,0	1/1:15,0:15:6.02:73,6,0
chr10	67595478	.	ATTTTATTT	A	3041.07	PASS	AB=0.961;AC=16;AF=0.286;AN=56;BaseQRankSum=7.754;DP=301;FS=7.088;HRun=0;HaplotypeScore=79.8903;InbreedingCoeff=-0.1288;MQ=63.08;MQ0=6;MQRankSum=1.232;QD=15.76;ReadPosRankSum=1.291;VQSLOD=1.0665;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:8:23.99:0,24,426	0/0:5,0:5:15.05:0,15,517	0/0:24,0:9:11.74:0,12,178	0/1:51,0:20:29.50:29,0,272	0/0:5,0:5:9.03:0,9,215	0/1:24,0:24:99:483,0,367	0/1:5,0:4:41.10:41,0,69	1/1:2,31:33:90.71:1385,91,0	0/0:8,0:7:20.73:0,21,185	0/0:10,0:10:27.09:0,27,355	0/0:9,0:9:27.07:0,27,338	0/1:5,0:5:84.99:85,0,102	0/0:1,0:1:3.01:0,3,39	0/1:5,0:5:30.32:91,0,30	0/1:4,0:4:54.03:88,0,54	0/1:4,0:4:30.39:91,0,30	0/0:18,0:18:36.96:0,37,950	0/0:9,0:9:27.08:0,27,541	0/1:16,0:15:99:123,0,376	0/1:5,0:5:35.11:35,0,143	0/0:2,0:2:6.02:0,6,79	0/0:2,0:2:6.02:0,6,79	0/0:2,0:2:6.02:0,6,175	0/0:5,0:5:12:0,12,138	0/1:8,0:8:35.12:35,0,130	0/1:1,7:8:15.36:372,0,15	0/1:10,0:10:99:170,0,190	1/1:1,14:15:6.02:175,6,0
chr10	67595925	.	T	TA	1401.16	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-6.943;DP=516;FS=0.000;HRun=10;HaplotypeScore=55.7239;InbreedingCoeff=0.9554;MQ=72.76;MQ0=1;MQRankSum=1.258;QD=19.73;ReadPosRankSum=-4.451;VQSLOD=2.4966;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:80.84:0,81,661	0/0:7,0:7:20.98:0,21,172	0/0:23,0:17:17.52:0,18,170	0/0:14,0:12:10.71:0,11,93	0/0:22,0:22:53.92:0,54,443	0/0:22,0:23:65.89:0,66,535	0/0:13,1:14:9.97:0,10,288	1/1:7,25:33:74.97:755,75,0	0/0:19,0:19:50.91:0,51,419	0/0:16,0:16:38.93:0,39,318	0/0:22,0:22:56.88:0,57,465	0/0:11,0:11:20.95:0,21,169	0/0:16,0:16:35.95:0,36,295	0/0:11,0:11:23.95:0,24,197	0/0:17,0:17:38.90:0,39,317	0/0:15,0:15:41.94:0,42,342	0/0:24,0:24:53.89:0,54,437	0/0:14,0:14:38.92:0,39,316	0/0:18,0:18:44.93:0,45,365	0/0:34,0:34:83.86:0,84,683	0/0:15,0:15:38.87:0,39,305	0/0:7,0:7:20.97:0,21,170	0/0:10,0:10:26.81:0,27,211	0/0:14,0:14:26.93:0,27,218	0/0:23,0:23:40.38:0,40,458	1/1:7,21:28:19.84:595,20,0	0/0:25,0:25:65.89:0,66,538	1/1:2,8:10:18.05:192,18,0
chr10	67597130	.	T	TTGTGTGTGTGTGTG	6346.72	PASS	AB=0.942;AC=35;AF=0.673;AN=52;BaseQRankSum=0.007;DP=685;FS=8.436;HRun=0;HaplotypeScore=272.4030;InbreedingCoeff=0.6762;MQ=65.79;MQ0=8;MQRankSum=-6.649;QD=14.39;ReadPosRankSum=-4.581;VQSLOD=1.0100;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:49:24.02:0,24,440	1/1:7,0:12:5.67:122,6,0	./.	./.	0/0:10,0:21:4.54:0,5,500	1/1:26,0:27:14.26:684,14,0	1/1:31,0:30:14.95:334,15,0	1/1:21,0:21:7.58:143,8,0	1/1:16,0:16:3.90:73,4,0	1/1:31,3:31:40.42:1531,40,0	0/1:11,0:11:0:0,0,0	1/1:30,0:29:5.96:339,6,0	0/0:14,0:18:21.07:0,21,758	0/0:25,0:25:1.86:0,2,11	0/1:23,0:23:0.01:0,0,0	1/1:18,0:21:3.01:183,3,0	1/1:16,0:24:25.31:639,25,0	1/1:22,0:22:6.02:182,6,0	1/1:24,0:23:14.38:135,14,0	1/1:20,0:19:4.12:67,4,0	1/1:33,0:30:11.85:128,12,0	0/0:17,0:16:11.52:0,12,283	0/0:15,0:15:8.96:0,9,237	0/0:34,0:36:50.91:0,51,1651	0/1:15,0:19:0.02:1,0,0	1/1:23,0:32:37.63:612,38,0	1/1:21,2:25:23.57:1010,24,0	1/1:10,0:14:9.01:163,9,0
chr10	67597836	.	C	CCA	17560.76	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-15.548;DP=599;FS=1.021;HRun=0;HaplotypeScore=68.1421;InbreedingCoeff=0.9982;MQ=85.94;MQ0=1;MQRankSum=-1.911;QD=49.05;ReadPosRankSum=1.817;VQSLOD=6.1207;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:84.28:0,84,1204	0/0:8,0:8:24.08:0,24,343	0/0:26,0:26:75.23:0,75,1049	0/0:21,0:21:57.18:0,57,790	0/0:15,0:15:45.13:0,45,606	1/1:0,9:10:18.06:330,18,0	1/1:1,19:20:54.19:989,54,0	1/1:1,32:33:99:1772,99,0	1/1:2,29:31:81.28:1484,81,0	1/1:1,17:18:51.17:921,51,0	1/1:0,10:10:30.10:550,30,0	1/1:0,25:25:75.26:1374,75,0	0/0:19,0:19:57.19:0,57,817	1/1:1,23:24:66.23:1209,66,0	1/1:1,22:23:63.22:1154,63,0	1/1:0,30:29:87.30:1595,87,0	0/0:28,0:28:84.27:0,84,1184	0/0:22,0:22:63.21:0,63,899	1/1:2,17:20:54.17:934,54,0	1/1:1,9:11:27.09:495,27,0	1/1:2,25:28:72.25:1320,72,0	0/0:15,0:15:36.09:0,36,479	0/0:22,0:22:63.20:0,63,884	0/0:32,0:32:84.28:0,84,1204	1/1:3,20:23:51.17:935,51,0	1/1:0,18:19:54.17:959,54,0	1/1:0,21:21:57.20:1045,57,0	1/1:0,11:11:27.09:495,27,0
chr10	67598343	.	T	TGCA	864.21	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-4.288;DP=427;FS=39.971;HRun=0;HaplotypeScore=64.6556;InbreedingCoeff=0.7928;MQ=77.14;MQ0=0;MQRankSum=-2.863;QD=22.74;ReadPosRankSum=0.227;VQSLOD=1.4879;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,15:26:33.11:675,33,0	0/0:7,0:7:18.04:0,18,240	0/0:12,0:12:21.07:0,21,290	0/0:19,0:19:33.11:0,33,470	1/1:4,7:12:14.98:307,15,0	0/0:27,0:27:51.10:0,51,672	0/0:19,0:19:39.13:0,39,564	0/0:17,0:17:33.10:0,33,462	0/0:17,0:17:33.09:0,33,458	0/0:13,0:13:24.08:0,24,347	0/0:10,0:10:15.05:0,15,217	0/0:14,0:14:39.13:0,39,564	0/0:17,0:17:45.15:0,45,648	0/0:10,0:10:21.07:0,21,301	0/0:18,0:18:36.12:0,36,521	0/0:20,0:20:42.13:0,42,589	0/0:28,0:28:66.22:0,66,954	0/0:11,0:11:30.07:0,30,407	0/0:16,0:16:27.08:0,27,373	0/0:14,0:14:27.09:0,27,387	0/0:30,0:30:66.18:0,66,911	0/0:7,0:7:3.01:0,3,43	0/0:5,0:6:9:0,9,108	0/0:25,0:25:54.18:0,54,781	0/0:6,0:6:6.02:0,6,87	0/0:5,0:5:9.03:0,9,130	0/0:15,0:15:33.09:0,33,456	0/0:6,0:6:12.04:0,12,174
chr10	67598815	.	AGTGTATACCT	A	21162.23	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=19.272;DP=679;FS=5.649;HRun=0;HaplotypeScore=219.3132;InbreedingCoeff=0.9992;MQ=86.26;MQ0=0;MQRankSum=-19.388;QD=69.84;ReadPosRankSum=1.153;VQSLOD=4.1712;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,154,7578	0/0:7,0:7:21.07:0,21,1120	0/0:28,0:28:78.24:0,78,3132	0/0:30,0:29:77.67:0,78,3263	0/0:34,0:34:87.30:0,87,4595	1/1:1,12:13:30.10:1000,30,0	1/1:2,20:22:48.08:1414,48,0	0/0:31,0:31:90.30:0,90,4302	1/1:3,26:29:62.87:1782,63,0	1/1:1,25:26:66.23:2201,66,0	1/1:1,22:23:51.13:1616,51,0	1/1:2,15:17:42.14:1374,42,0	0/0:18,0:18:51.18:0,51,2631	1/1:2,23:25:69.04:1899,69,0	1/1:0,28:28:72.02:1881,72,0	1/1:1,28:29:72.05:2002,72,0	0/0:28,0:28:81.28:0,81,4171	0/0:25,0:25:69.22:0,69,3472	1/1:4,13:17:39.12:1114,39,0	1/1:1,25:26:63.05:1778,63,0	1/1:2,14:16:28.64:583,29,0	0/0:21,0:21:60.21:0,60,3180	0/0:25,0:25:66.21:0,66,3240	0/0:29,0:29:84.29:0,84,4253	1/1:1,11:12:30.10:999,30,0	0/0:38,0:38:99:0,111,5558	1/1:1,19:20:48.12:1520,48,0	0/0:11,0:11:33.11:0,33,1724
chr10	67599601	.	A	ATAGC	25924.19	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-9.913;DP=440;FS=7.685;HRun=0;HaplotypeScore=66.1731;InbreedingCoeff=0.9986;MQ=76.95;MQ0=0;MQRankSum=-8.847;QD=73.44;ReadPosRankSum=3.249;VQSLOD=6.9159;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,21:25:66.23:1843,66,0	1/1:0,10:10:30.10:837,30,0	0/0:13,0:13:30.09:0,30,537	0/0:24,0:24:63.19:0,63,1140	1/1:1,11:12:33.11:921,33,0	1/1:3,19:22:60.21:1675,60,0	1/1:3,10:14:36.12:986,36,0	1/1:9,15:26:78.25:2026,78,0	1/1:6,10:18:39.13:1068,39,0	1/1:2,14:17:48.15:1276,48,0	1/1:1,16:19:48.16:1339,48,0	1/1:4,9:14:27.09:754,27,0	0/0:11,0:11:33.11:0,33,659	1/1:2,11:14:30.10:838,30,0	1/1:1,9:11:30.10:837,30,0	1/1:1,9:10:30.10:838,30,0	1/1:1,19:21:57.20:1593,57,0	1/1:4,11:15:42.14:1150,42,0	1/1:4,13:17:51.17:1358,51,0	1/1:2,14:17:45.15:1256,45,0	1/1:1,12:13:39.13:1090,39,0	0/0:12,0:12:36.12:0,36,719	0/0:13,0:13:39.13:0,39,765	0/0:14,0:14:42.14:0,42,839	1/1:1,8:9:24.08:671,24,0	1/1:2,15:19:54.15:1389,54,0	1/1:0,12:12:36.12:1006,36,0	1/1:2,14:16:42.14:1174,42,0
chr10	67599697	.	G	GA	1408.34	PASS	AB=0.927;AC=33;AF=0.589;AN=56;BaseQRankSum=1.263;DP=482;FS=4.014;HRun=16;HaplotypeScore=72.4712;InbreedingCoeff=0.0235;MQ=47.11;MQ0=8;MQRankSum=-2.988;QD=3.52;ReadPosRankSum=-4.176;VQSLOD=-0.5493;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:31:19.90:0,20,177	0/1:5,0:6:8.99:9,0,40	0/1:9,0:4:3.92:4,0,13	0/0:6,0:2:2.87:0,3,16	0/1:22,3:28:64.77:65,0,72	0/1:4,8:13:32.39:44,0,32	0/1:16,0:13:7.83:34,0,8	1/1:24,4:28:13.48:181,13,0	0/1:12,1:13:29.35:29,0,29	1/1:11,12:23:10.67:156,11,0	1/1:18,2:19:22.28:129,22,0	0/1:19,3:21:30.22:91,0,30	0/0:13,0:13:16.26:0,16,87	1/1:12,1:13:4.77:22,5,0	0/1:14,0:14:0.75:53,0,1	0/1:9,1:10:13.06:32,0,13	0/1:30,1:30:97.92:98,0,131	0/0:12,0:11:13.60:0,14,72	1/1:16,3:18:11.27:137,11,0	1/1:11,2:13:11.24:84,11,0	1/1:2,7:9:6.87:50,7,0	0/1:16,3:19:33.85:34,0,69	0/1:19,0:20:11.05:11,0,58	0/0:18,0:17:22.21:0,22,126	1/1:4,9:13:5.30:47,5,0	0/1:24,0:24:12.72:133,0,13	1/1:8,10:18:8.76:55,9,0	1/1:11,2:12:12.78:86,13,0
chr10	67600407	.	CA	C	1141.99	PASS	AB=0.733;AC=33;AF=0.589;AN=56;BaseQRankSum=-1.200;DP=432;FS=34.304;HRun=15;HaplotypeScore=91.3280;InbreedingCoeff=0.2805;MQ=72.72;MQ0=2;MQRankSum=1.065;QD=3.71;ReadPosRankSum=8.706;VQSLOD=-0.6578;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:27:38.97:0,39,226	1/1:4,1:5:2.88:19,3,0	0/0:19,0:16:5.23:0,5,76	0/0:14,0:9:10.19:0,10,53	0/0:8,0:15:26.92:0,27,180	1/1:11,8:20:26.31:171,26,0	0/1:8,6:16:7.21:53,0,7	1/1:5,0:19:17.39:54,17,0	1/1:5,4:10:8.71:57,9,0	1/1:11,6:19:18.69:107,19,0	1/1:7,0:9:4.76:24,5,0	0/1:11,7:19:4.74:62,0,5	0/0:19,1:20:16.53:0,17,226	0/1:14,4:19:9.28:49,0,9	0/1:7,3:12:29.34:38,0,29	1/1:7,5:13:6.45:73,6,0	1/1:9,11:20:17.53:115,18,0	0/1:5,8:13:6.45:94,0,6	0/1:11,6:16:66.36:66,0,89	1/1:8,11:21:0.30:118,0,0	1/1:4,6:11:7.87:44,8,0	0/1:14,1:16:0.90:1,0,98	0/0:13,1:15:21.08:0,21,199	0/0:13,0:13:15.43:0,15,120	0/1:8,7:15:44:86,0,44	1/1:8,0:16:15.13:45,15,0	0/1:6,2:9:17.06:17,0,19	1/1:3,0:8:10.16:29,10,0
chr10	67600446	.	C	CT	887.86	PASS	AB=0.939;AC=27;AF=0.482;AN=56;BaseQRankSum=2.649;DP=452;FS=2.612;HRun=18;HaplotypeScore=89.7342;InbreedingCoeff=0.1048;MQ=52.22;MQ0=17;MQRankSum=-3.804;QD=2.70;ReadPosRankSum=-0.916;VQSLOD=-0.6312;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,1:20:14.52:108,15,0	0/0:5,0:5:10.56:0,11,48	0/1:11,0:3:0:0,0,0	0/0:13,0:7:1.52:0,2,5	1/1:15,1:16:20.16:82,20,0	0/1:26,1:27:41.91:70,0,42	0/1:15,0:14:10.78:51,0,11	0/0:24,0:23:18.43:0,18,81	1/1:10,1:11:11.71:63,12,0	0/1:15,2:17:22.37:44,0,22	0/1:14,0:14:15.82:16,0,33	1/1:15,1:16:14.46:91,14,0	0/1:11,2:15:37.63:38,0,44	0/1:8,4:12:2.30:16,0,2	0/1:8,1:10:2.47:49,0,2	1/1:9,2:12:18.05:103,18,0	0/0:25,0:25:12.61:0,13,81	0/0:18,0:18:19.46:0,19,82	0/1:28,1:29:17.63:58,0,18	1/1:15,5:20:5.97:86,6,0	0/0:5,0:4:5.50:0,5,24	0/1:10,0:11:10.08:10,0,19	0/0:17,0:17:5.13:0,5,27	0/0:10,1:11:13.54:0,14,60	0/1:15,2:17:4.55:87,0,5	0/1:22,0:22:9.93:10,0,85	1/1:13,0:13:3.81:69,4,0	0/1:10,0:11:7.70:8,0,35
chr10	67603954	.	TGAGGGACTTAACAGTCTCAA	T	2640.53	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.998;DP=619;FS=0.922;HRun=0;HaplotypeScore=309.1265;InbreedingCoeff=0.9831;MQ=80.09;MQ0=0;MQRankSum=-6.961;QD=61.41;ReadPosRankSum=-1.150;VQSLOD=2.6471;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,9:17:12.04:662,12,0	0/0:14,0:14:42.14:0,42,3594	0/0:20,0:20:57.15:0,57,3617	0/0:17,0:17:38.80:0,39,2597	1/1:6,20:26:39.13:2095,39,0	0/0:34,0:33:99:0,99,8480	0/0:24,0:24:63.22:0,63,5989	0/0:26,0:26:66.23:0,66,5357	0/0:22,0:22:66.23:0,66,5738	0/0:33,0:33:99:0,99,9019	0/0:18,0:18:51.16:0,51,4294	0/0:22,0:22:60.21:0,60,5095	0/0:11,0:11:27.09:0,27,2390	0/0:12,0:12:36.12:0,36,3357	0/0:31,0:31:90.28:0,90,7148	0/0:21,0:21:60.21:0,60,5106	0/0:40,0:40:99:0,114,9935	0/0:24,0:24:69.24:0,69,5774	0/0:15,0:15:42.14:0,42,3000	0/0:19,0:19:57.20:0,57,5166	0/0:36,0:36:99:0,102,8930	0/0:22,0:22:63.22:0,63,5610	0/0:15,0:15:45.15:0,45,4042	0/0:17,0:17:48.16:0,48,3907	0/0:17,0:17:48.16:0,48,4069	0/0:28,0:28:72.25:0,72,6159	0/0:23,0:23:63.22:0,63,5184	0/0:15,0:15:33.11:0,33,2799
chr10	67604107	.	GT	G	5670.80	PASS	AB=0.791;AC=38;AF=0.679;AN=56;BaseQRankSum=6.911;DP=571;FS=4.700;HRun=12;HaplotypeScore=64.9455;InbreedingCoeff=0.7423;MQ=67.12;MQ0=6;MQRankSum=2.454;QD=13.50;ReadPosRankSum=2.010;VQSLOD=5.2767;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,29:39:72.93:560,73,0	1/1:2,6:8:14.94:116,15,0	0/1:24,0:11:11.55:12,0,43	0/0:22,0:12:9.55:0,10,55	1/1:1,9:10:17.48:139,17,0	1/1:5,13:19:40.71:299,41,0	1/1:3,26:29:65.71:511,66,0	0/0:29,0:30:29.34:0,29,442	1/1:5,14:19:38.83:301,39,0	1/1:13,16:29:45.99:348,46,0	1/1:4,11:15:26.87:209,27,0	0/1:3,9:12:0.58:179,0,1	0/1:9,0:9:0.48:0,0,134	1/1:2,9:12:18.21:161,18,0	1/1:5,15:20:43.64:329,44,0	0/1:4,9:13:6.74:139,0,7	1/1:7,26:33:58.87:521,59,0	1/1:3,20:23:47.20:356,47,0	1/1:3,14:16:36.72:280,37,0	1/1:7,14:21:35.76:273,36,0	1/1:7,20:25:50.78:395,51,0	0/0:22,0:24:46.29:0,46,444	0/0:15,1:16:15.82:0,16,330	0/0:17,0:17:39.08:0,39,396	1/1:8,10:18:28.66:214,29,0	0/0:23,1:24:9.83:0,10,281	1/1:4,18:22:43.60:330,44,0	0/0:16,2:18:18.83:0,19,364
chr10	67604655	.	AT	A	642.21	PASS	AB=0.835;AC=21;AF=0.375;AN=56;BaseQRankSum=11.272;DP=671;FS=5.168;HRun=16;HaplotypeScore=109.2295;InbreedingCoeff=0.6005;MQ=73.78;MQ0=7;MQRankSum=-0.756;QD=2.22;ReadPosRankSum=2.867;VQSLOD=0.0924;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:37,0:37:52.67:148,53,0	1/1:15,0:15:17.94:51,18,0	0/0:53,0:24:19.29:0,19,132	0/0:23,0:16:12.04:0,12,70	1/1:34,0:35:36.66:107,37,0	0/0:22,0:25:10.56:0,11,260	0/0:15,4:20:8.10:0,8,199	1/1:38,0:38:32.97:95,33,0	0/1:11,2:13:2.29:2,0,177	0/0:30,3:36:23.49:0,23,485	0/1:23,3:27:23.75:24,0,211	0/1:9,3:13:27.91:28,0,56	0/0:17,0:18:32.70:0,33,250	0/1:8,3:11:3.04:3,0,83	0/0:20,3:25:6.57:0,7,342	0/0:17,2:23:19.06:0,19,294	1/1:25,0:25:28.42:81,28,0	1/1:9,0:9:12.68:38,13,0	0/0:20,0:20:28.68:0,29,218	0/0:28,2:32:33.52:0,34,409	0/0:15,1:15:11.78:0,12,194	0/0:17,3:20:2.89:0,3,232	0/0:19,4:23:20.89:0,21,271	0/0:16,2:21:17.25:0,17,315	0/1:13,4:17:15.87:16,0,161	1/1:35,0:36:57.20:182,57,0	0/0:24,1:27:51.15:0,51,434	1/1:12,0:13:22.84:67,23,0
chr10	67604668	.	TTTTA	T	3963.71	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=5.565;DP=684;FS=4.058;HRun=0;HaplotypeScore=138.7967;InbreedingCoeff=0.9098;MQ=76.32;MQ0=7;MQRankSum=-0.092;QD=18.44;ReadPosRankSum=4.823;VQSLOD=3.2394;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,35:38:81.12:1216,81,0	1/1:10,3:12:32.04:281,32,0	0/0:58,0:29:61.30:0,61,671	0/0:27,0:17:36.39:0,36,310	1/1:2,30:32:76.65:936,77,0	0/0:26,0:26:71.99:0,72,1289	0/0:14,0:14:33.10:0,33,736	1/1:41,0:41:24.40:529,24,0	0/0:14,0:14:42.12:0,42,824	0/0:34,0:34:99:0,102,2062	0/0:24,0:24:69.06:0,69,1304	0/0:9,0:9:27.07:0,27,456	0/0:14,0:14:39.12:0,39,838	0/0:11,0:11:27.04:0,27,432	0/0:28,0:28:84.20:0,84,1603	0/0:25,0:25:69.18:0,69,1374	1/1:23,0:23:40.42:216,40,0	1/1:11,0:11:12.70:75,13,0	0/0:20,0:20:57.07:0,57,907	0/0:31,0:31:90.11:0,90,1648	0/0:18,0:17:51.11:0,51,932	0/0:21,0:21:62.95:0,63,1110	0/0:27,0:27:72.01:0,72,1180	0/0:22,0:22:66.21:0,66,1373	0/0:17,0:17:45.13:0,45,889	0/1:40,0:40:11.18:422,0,11	0/0:29,0:29:84.20:0,84,1685	1/1:13,4:17:27.28:290,27,0
chr10	67604669	.	TTTA	T	5122.17	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=3.688;DP=670;FS=1.490;HRun=0;HaplotypeScore=121.7812;InbreedingCoeff=0.9981;MQ=77.37;MQ0=7;MQRankSum=-0.453;QD=24.28;ReadPosRankSum=3.697;VQSLOD=4.6956;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:37,1:38:80.88:767,81,0	1/1:4,9:12:32.96:387,33,0	0/0:55,0:28:44.80:0,45,530	0/0:27,0:18:31.35:0,31,258	1/1:32,0:32:79.94:637,80,0	0/0:25,0:25:64.72:0,65,974	0/0:14,0:14:32.78:0,33,581	1/1:5,36:41:79.64:987,80,0	0/0:15,0:15:45.10:0,45,681	0/0:34,0:34:99:0,102,1604	0/0:24,0:24:68.99:0,69,1002	0/0:9,0:9:26.86:0,27,342	0/0:13,0:13:39.11:0,39,673	0/0:11,0:11:27.04:0,27,362	0/0:26,0:26:77.81:0,78,1242	0/0:25,0:25:69.17:0,69,1120	1/1:0,22:22:42.12:606,42,0	1/1:0,11:11:18.05:242,18,0	0/0:18,0:18:48.08:0,48,668	0/0:30,0:30:83.67:0,84,1257	0/0:17,0:16:48.11:0,48,743	0/0:20,0:20:56.95:0,57,855	0/0:26,0:26:62.99:0,63,880	0/0:23,0:23:69.18:0,69,1118	0/0:17,0:17:44.33:0,44,683	1/1:3,34:37:85.26:1094,85,0	0/0:29,0:29:81.67:0,82,1336	1/1:5,12:17:33.08:402,33,0
chr10	67605022	.	T	TC	2117.58	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-11.266;DP=593;FS=0.944;HRun=0;HaplotypeScore=98.5349;InbreedingCoeff=0.8587;MQ=52.63;MQ0=10;MQRankSum=8.045;QD=16.94;ReadPosRankSum=-1.613;VQSLOD=4.7556;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,26:29:35.83:477,36,0	0/0:6,0:5:7.13:0,7,105	0/0:19,0:3:8.96:0,9,78	0/0:15,0:4:3.46:0,3,32	1/1:1,20:22:50.45:469,50,0	0/0:24,0:24:36.42:0,36,171	0/0:25,0:25:16.73:0,17,78	1/1:7,26:31:56.34:647,56,0	0/0:19,0:19:18.33:0,18,82	0/0:34,0:34:83.93:0,84,540	0/0:27,0:27:24.27:0,24,136	0/0:14,0:15:17.46:0,17,101	0/0:17,0:17:51.01:0,51,511	0/0:17,0:16:14.19:0,14,78	0/0:22,0:22:36.42:0,36,171	0/0:14,0:14:19.43:0,19,89	0/0:26,0:25:62.42:0,62,646	0/0:20,0:20:51.56:0,52,570	0/0:35,0:34:94.26:0,94,698	0/0:27,0:27:57.23:0,57,303	0/0:11,0:9:4.35:0,4,17	0/0:15,0:15:41.88:0,42,389	0/0:17,0:17:40.36:0,40,340	0/0:21,0:21:51.13:0,51,546	0/0:11,0:11:13.78:0,14,70	1/1:3,22:25:71.68:651,72,0	0/0:31,0:30:39.30:0,39,186	1/1:2,14:16:5.12:41,5,0
chr10	67605025	.	T	TCTTTTTTC	14886.28	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-12.484;DP=612;FS=15.284;HRun=0;HaplotypeScore=110.0948;InbreedingCoeff=0.9101;MQ=53.07;MQ0=11;MQRankSum=-7.334;QD=44.44;ReadPosRankSum=4.074;VQSLOD=3.6461;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:53.85:0,54,943	0/0:6,0:5:7.97:0,8,157	0/0:19,0:3:8.98:0,9,89	0/0:16,0:4:6.86:0,7,95	0/0:22,0:22:50.82:0,51,768	1/1:2,22:24:38.96:1489,39,0	1/1:1,19:30:20.88:752,21,0	0/0:33,0:31:80.46:0,80,1067	1/1:0,18:19:21:769,21,0	1/1:4,27:34:84.45:2207,84,0	1/1:1,22:31:44.41:776,44,0	1/1:2,11:15:14.96:517,15,0	0/0:16,0:16:48.11:0,48,928	1/1:3,14:19:4.13:480,4,0	1/1:1,20:27:39.07:1598,39,0	1/1:0,11:15:21.07:826,21,0	0/0:25,0:24:62.50:0,63,1316	0/0:20,0:20:54.11:0,54,1096	1/1:4,23:32:86.09:1667,86,0	1/1:1,24:35:60.14:1605,60,0	1/1:2,5:9:3.01:122,3,0	0/0:14,0:14:38.87:0,39,627	0/0:15,0:15:38.70:0,39,532	0/0:21,0:21:52.51:0,53,1010	1/1:0,8:10:12.04:441,12,0	0/0:24,0:24:66.03:0,66,1027	1/1:2,26:30:45.15:1638,45,0	0/0:15,0:15:9:0,9,172
chr10	67607104	.	GAC	G	220.64	PASS	AB=0.857;AC=16;AF=0.320;AN=50;BaseQRankSum=1.005;DP=605;FS=4.771;HRun=0;HaplotypeScore=113.2759;InbreedingCoeff=0.5437;MQ=67.36;MQ0=17;MQRankSum=-2.461;QD=1.19;ReadPosRankSum=1.241;VQSLOD=1.7963;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:52,0:51:2.81:14,3,0	1/1:7,0:7:8.52:42,9,0	./.	./.	./.	0/0:21,0:21:2.84:0,3,21	0/0:20,0:20:9.84:0,10,61	0/0:17,0:17:0:0,0,0	0/0:12,0:12:11.67:0,12,113	0/0:21,0:20:24.24:0,24,189	0/0:13,0:13:8.94:0,9,66	0/0:25,0:25:14.22:0,14,120	1/1:8,3:11:3.01:32,3,0	0/0:20,0:20:19.22:0,19,152	0/0:22,0:22:17.16:0,17,213	0/0:18,0:18:17.99:0,18,162	0/1:26,0:26:8.44:8,0,13	1/1:21,0:19:4.59:26,5,0	0/0:10,0:10:8.71:0,9,72	0/0:13,0:13:14.60:0,15,154	0/0:40,0:39:21.40:0,21,168	0/0:17,5:22:2.98:0,3,25	0/1:9,5:15:27.83:62,0,28	1/1:23,3:25:17.55:150,18,0	0/0:18,0:18:20.77:0,21,163	1/1:8,0:8:2.84:14,3,0	0/0:16,0:15:11.97:0,12,107	1/1:19,0:19:5.68:28,6,0
chr10	67607137	.	ACACACACACACACACACC	A	1593.54	PASS	AB=0.974;AC=21;AF=0.375;AN=56;BaseQRankSum=-1.509;DP=620;FS=0.438;HRun=0;HaplotypeScore=250.6863;InbreedingCoeff=-0.2627;MQ=50.40;MQ0=27;MQRankSum=1.010;QD=3.71;ReadPosRankSum=-5.534;VQSLOD=1.4153;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:10,42:49:5.02:271,0,5	1/1:5,0:5:9.02:93,9,0	0/0:29,0:11:33:0,33,381	0/0:30,0:15:44.87:0,45,536	1/1:5,18:22:17.71:200,18,0	0/1:26,0:26:34.38:34,0,699	0/1:24,0:24:99:139,0,669	0/1:24,0:23:99:141,0,847	0/1:10,0:9:7.19:7,0,1079	0/1:30,0:28:99:135,0,1925	0/1:14,0:14:47.50:47,0,751	0/1:28,0:28:7.58:8,0,2299	0/0:11,0:11:22.84:0,23,524	0/1:21,0:20:53.75:54,0,1580	0/0:19,0:18:18.77:0,19,1968	0/1:17,0:17:22.56:23,0,1823	0/1:27,0:27:99:235,0,347	0/1:23,0:22:99:142,0,222	0/1:11,0:10:52.14:52,0,1028	0/0:16,0:15:9.12:0,9,1295	0/1:40,0:38:71.88:72,0,2138	0/0:26,0:26:51.69:0,52,1620	0/0:20,0:20:42.89:0,43,1945	0/0:27,0:26:67.99:0,68,2677	0/1:23,0:23:3.24:3,0,1923	0/1:15,0:15:79.94:80,0,670	0/1:17,0:16:25.78:26,0,1127	0/0:12,0:12:9.61:0,10,214
chr10	67607143	.	ACACACACACACC	A	3038.21	PASS	AB=1.000;AC=26;AF=0.464;AN=56;BaseQRankSum=-3.059;DP=608;FS=0.395;HRun=0;HaplotypeScore=193.5144;InbreedingCoeff=-0.1823;MQ=55.12;MQ0=24;MQRankSum=1.965;QD=6.63;ReadPosRankSum=-2.488;VQSLOD=2.3548;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:46,0:43:8.96:160,9,0	1/1:0,4:4:9.03:343,9,0	0/0:23,0:11:32.87:0,33,317	0/0:31,0:23:61.79:0,62,597	1/1:19,0:18:17.72:138,18,0	0/1:24,0:24:72.05:72,0,193	0/1:23,0:23:99:142,0,267	0/1:28,0:27:99:279,0,218	0/1:11,0:10:23.24:23,0,644	0/1:30,0:28:99:219,0,1116	0/1:14,0:14:72.36:72,0,338	0/1:29,0:29:78.25:78,0,1201	0/0:12,0:12:24.91:0,25,396	0/1:23,0:22:99:121,0,850	0/1:20,0:19:21.61:22,0,1019	0/1:16,0:16:25.58:26,0,940	1/1:21,3:24:47.56:606,48,0	1/1:6,17:22:11.53:320,12,0	0/1:14,0:13:99:111,0,592	0/1:15,0:14:63.92:64,0,730	0/1:40,0:38:99:161,0,1075	0/0:25,0:25:44.69:0,45,888	0/0:21,0:21:45.46:0,45,1278	0/0:27,0:26:64.91:0,65,1592	0/1:23,0:23:75.29:75,0,1012	0/1:16,0:16:99:153,0,177	0/1:16,0:15:32.69:33,0,610	0/0:11,0:11:7.23:0,7,51
chr10	67607149	.	ACACACC	A	3924.62	PASS	AB=1.000;AC=30;AF=0.536;AN=56;BaseQRankSum=-4.209;DP=606;FS=2.189;HRun=0;HaplotypeScore=145.3910;InbreedingCoeff=-0.0421;MQ=63.93;MQ0=20;MQRankSum=-1.260;QD=8.55;ReadPosRankSum=0.818;VQSLOD=2.8983;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:46,0:43:7.77:76,8,0	1/1:4,0:4:9.03:160,9,0	0/0:30,0:18:53.83:0,54,510	0/0:34,0:27:66.68:0,67,651	1/1:19,0:18:17.08:97,17,0	0/1:27,0:27:16.97:207,0,17	0/1:23,0:23:35.09:187,0,35	1/1:25,0:25:42.24:399,42,0	0/1:14,0:13:90.75:91,0,216	0/1:32,0:31:99:325,0,325	0/1:12,0:12:35.30:119,0,35	0/1:25,0:25:99:161,0,238	0/0:13,0:13:30.01:0,30,287	0/1:25,0:24:99:185,0,283	0/1:19,0:18:24.65:25,0,408	0/1:15,0:15:80.78:81,0,269	1/1:23,0:23:43.15:433,43,0	1/1:19,0:19:11.91:158,12,0	0/1:15,0:14:99:152,0,158	0/1:14,0:13:87.82:88,0,285	0/1:35,0:33:99:227,0,300	0/0:24,0:24:32.61:0,33,347	0/0:23,0:23:47.51:0,48,596	0/0:23,0:22:29.04:0,29,672	0/1:23,0:23:99:126,0,337	1/1:16,1:17:43.51:404,44,0	0/1:16,0:15:79.63:80,0,179	1/1:1,10:11:5.06:144,5,0
chr10	67607153	.	ACC	A	5165.60	PASS	AB=0.975;AC=42;AF=0.750;AN=56;BaseQRankSum=-1.305;DP=617;FS=1.882;HRun=6;HaplotypeScore=110.3288;InbreedingCoeff=0.7366;MQ=70.84;MQ0=19;MQRankSum=-1.626;QD=11.11;ReadPosRankSum=2.944;VQSLOD=1.0969;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:45,0:43:8.88:61,9,0	1/1:4,0:4:9:77,9,0	0/0:31,0:19:56.84:0,57,539	0/0:42,0:35:87.54:0,88,811	1/1:19,0:18:14.71:90,15,0	1/1:26,0:26:33.25:270,33,0	1/1:26,0:26:45.25:353,45,0	1/1:7,19:26:56.65:466,57,0	1/1:14,0:13:9.56:175,10,0	1/1:32,0:31:54.16:491,54,0	1/1:14,0:14:29.29:227,29,0	1/1:22,0:22:16.35:226,16,0	0/0:13,0:13:22.16:0,22,230	1/1:26,0:25:35.35:338,35,0	0/1:18,1:18:12.38:93,0,12	1/1:16,0:16:8.93:168,9,0	1/1:21,0:21:52.76:378,53,0	1/1:19,0:19:11.17:80,11,0	1/1:15,0:14:29.44:259,29,0	0/1:14,0:13:15.51:115,0,16	1/1:34,0:32:45.12:383,45,0	0/0:21,0:21:30.44:0,30,260	0/0:24,0:24:45.99:0,46,374	0/0:21,0:20:29.39:0,29,328	1/1:26,0:26:37.31:319,37,0	1/1:18,0:18:47.78:387,48,0	1/1:18,0:18:6.61:157,7,0	1/1:11,0:11:6:53,6,0
chr10	67607155	.	C	CACA	1127.28	PASS	AB=0.977;AC=18;AF=0.321;AN=56;BaseQRankSum=5.798;DP=586;FS=0.000;HRun=0;HaplotypeScore=134.5351;InbreedingCoeff=-0.1593;MQ=74.59;MQ0=18;MQRankSum=-0.560;QD=3.35;ReadPosRankSum=-3.341;VQSLOD=1.4656;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:44,0:43:2.18:32,0,2	0/0:4,0:4:3.47:0,3,10	0/0:33,0:21:57.19:0,57,1016	0/0:43,0:36:99:0,105,1634	1/1:19,0:18:14.80:127,15,0	0/1:23,0:23:13.76:14,0,113	0/1:23,0:23:99:110,0,104	0/0:25,0:25:10.25:0,10,236	0/1:13,0:12:46.91:47,0,54	0/1:23,0:22:35.68:36,0,167	0/1:15,0:15:53.88:54,0,63	0/0:21,0:21:2.96:0,3,171	0/0:13,0:13:29.88:0,30,520	0/1:23,0:22:17.35:17,0,128	0/1:14,1:16:37.73:150,0,38	0/1:13,1:14:47.71:128,0,48	1/1:21,0:21:33.96:226,34,0	0/0:19,0:19:0.80:0,1,10	0/1:13,0:12:29.63:30,0,96	0/1:14,0:13:7.91:8,0,92	0/1:31,1:30:67.49:67,0,192	0/0:20,0:20:29.60:0,30,545	0/0:25,0:25:57.16:0,57,910	0/0:18,0:17:48.13:0,48,816	0/1:24,1:26:91.48:168,0,91	0/0:18,0:18:21.15:0,21,229	0/1:17,0:17:61.25:78,0,61	0/0:10,0:10:5.85:0,6,35
chr10	67608603	.	GCCTTGTGC	G	6566.39	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=12.699;DP=686;FS=0.920;HRun=0;HaplotypeScore=170.1864;InbreedingCoeff=0.9981;MQ=80.09;MQ0=0;MQRankSum=-13.443;QD=61.37;ReadPosRankSum=0.757;VQSLOD=4.3990;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,48:48:87.17:2485,87,0	1/1:0,10:10:18.06:544,18,0	0/0:33,0:33:99:0,99,4107	0/0:25,0:25:74.99:0,75,2783	1/1:0,18:18:44.96:1143,45,0	0/0:12,0:12:36.12:0,36,1595	0/0:27,0:27:81.28:0,81,3512	0/0:32,0:32:96.33:0,96,3994	0/0:25,0:25:75.26:0,75,3467	0/0:26,0:26:72.25:0,72,3239	0/0:17,0:17:48.16:0,48,2063	0/0:24,0:24:72.25:0,72,3239	0/0:29,0:29:87.30:0,87,3616	0/0:20,0:20:60.21:0,60,2547	0/0:26,0:26:78.27:0,78,3491	0/0:20,0:19:60.21:0,60,2654	1/1:0,18:18:45.15:1319,45,0	1/1:1,11:13:39.09:1076,39,0	0/0:23,0:23:69.24:0,69,3075	0/0:33,0:33:96.33:0,96,3981	0/0:63,0:63:99:0,184,8290	0/0:16,0:16:45.15:0,45,2054	0/0:15,0:15:42.13:0,42,1574	0/0:28,0:28:84.29:0,84,3616	0/0:16,0:16:45.15:0,45,2078	0/0:26,0:26:78.27:0,78,3497	0/0:24,0:24:72.23:0,72,3046	0/0:19,0:19:57.20:0,57,2457
chr10	67608891	.	TTC	T	1110.87	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=8.155;DP=444;FS=28.095;HRun=0;HaplotypeScore=81.8275;InbreedingCoeff=0.7930;MQ=56.07;MQ0=13;MQRankSum=-4.691;QD=12.21;ReadPosRankSum=-1.443;VQSLOD=1.4033;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,2:21:48.33:585,48,0	0/0:3,0:3:0.45:0,0,1	0/0:28,0:9:9.67:0,10,191	0/1:25,0:13:1.74:2,0,167	1/1:10,2:11:33.09:438,33,0	0/0:14,0:14:38.06:0,38,526	0/0:18,0:18:39.12:0,39,608	0/0:34,0:33:84.21:0,84,1330	0/0:9,0:9:27.09:0,27,441	0/0:26,0:26:71.26:0,71,1015	0/0:14,0:14:42.13:0,42,675	0/0:8,0:8:20.85:0,21,286	0/0:13,0:13:14.69:0,15,459	0/0:7,0:7:11.21:0,11,204	0/0:13,0:10:26.93:0,27,351	0/0:11,0:11:28.90:0,29,401	1/1:21,0:18:23:145,23,0	1/1:12,0:10:20.59:97,21,0	0/0:26,0:22:54.16:0,54,867	0/0:18,0:17:26.87:0,27,431	0/0:14,0:14:29.93:0,30,416	0/0:7,0:7:1.72:0,2,207	0/0:15,0:15:34.99:0,35,546	0/0:7,0:7:9.15:0,9,72	0/0:11,0:11:12.09:0,12,333	0/0:22,0:20:51.15:0,51,760	0/0:16,0:15:38.87:0,39,608	0/0:19,0:18:54.10:0,54,756
chr10	67608896	.	T	TGC	986.52	PASS	AB=0.851;AC=6;AF=0.107;AN=56;BaseQRankSum=6.483;DP=470;FS=51.730;HRun=0;HaplotypeScore=100.9186;InbreedingCoeff=0.5590;MQ=53.52;MQ0=23;MQRankSum=-3.164;QD=12.98;ReadPosRankSum=0.307;VQSLOD=1.5434;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:15,11:26:51.97:430,0,52	0/0:2,0:2:1.82:0,2,5	0/0:30,0:9:8.33:0,8,172	0/0:32,0:13:29.41:0,29,357	1/1:9,7:15:28.26:410,28,0	0/0:12,0:12:33.58:0,34,538	0/0:21,0:20:42.89:0,43,634	0/0:33,0:31:78.27:0,78,1261	0/0:13,0:13:30.47:0,30,451	0/0:23,0:23:60.63:0,61,947	0/0:16,0:16:39.83:0,40,638	0/0:8,0:8:21.07:0,21,333	0/0:14,0:14:39.12:0,39,584	0/0:8,0:7:19.51:0,20,255	0/0:14,0:11:27.02:0,27,399	0/0:13,0:13:39.10:0,39,563	1/1:21,0:18:9.79:190,10,0	0/1:13,0:10:18.61:88,0,19	0/0:27,0:20:51.65:0,52,831	0/0:16,0:15:35.89:0,36,493	0/0:13,0:12:26.67:0,27,406	0/0:6,0:6:18.06:0,18,263	0/0:16,0:15:36.11:0,36,557	0/0:8,0:8:12.51:0,13,166	0/0:12,0:12:27.07:0,27,413	0/0:22,0:20:51.16:0,51,808	0/0:17,0:16:36.12:0,36,587	0/0:17,0:17:48.13:0,48,733
chr10	67608899	.	CTTT	C	719.02	PASS	AB=1.000;AC=6;AF=0.107;AN=56;BaseQRankSum=7.462;DP=464;FS=26.477;HRun=5;HaplotypeScore=93.2511;InbreedingCoeff=0.5902;MQ=51.33;MQ0=24;MQRankSum=-2.572;QD=9.34;ReadPosRankSum=0.608;VQSLOD=-0.7261;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:24,2:26:24.57:374,25,0	0/0:2,0:2:0.61:0,1,3	0/0:32,0:9:4.61:0,5,142	0/0:33,0:13:20.40:0,20,232	1/1:14,2:15:29.78:356,30,0	0/0:13,0:13:37.40:0,37,399	0/0:22,0:20:42.76:0,43,486	0/0:32,0:29:66.15:0,66,998	0/0:14,0:14:31.89:0,32,333	0/0:21,0:21:58.65:0,59,783	0/0:16,0:16:33.52:0,34,485	0/0:6,0:6:13.18:0,13,173	0/0:11,0:11:18.65:0,19,326	0/0:8,0:7:14.07:0,14,183	0/0:16,0:13:26.36:0,26,292	0/0:13,0:13:30.20:0,30,386	0/1:21,0:18:12.05:90,0,12	0/1:14,0:11:8.02:34,0,8	0/0:27,0:18:48.51:0,49,725	0/0:16,0:15:23.81:0,24,237	0/0:13,0:12:26.96:0,27,336	0/0:5,0:5:14.50:0,15,160	0/0:15,0:14:36.09:0,36,566	0/0:8,0:8:11.79:0,12,141	0/0:12,0:12:26.37:0,26,293	0/0:21,0:19:48.35:0,48,597	0/0:17,0:16:38.82:0,39,474	0/0:13,0:13:29.91:0,30,397
chr10	67608913	.	TTTTTTTTTTTTTTTTTTTC	T	595.50	PASS	AB=0.923;AC=4;AF=0.071;AN=56;BaseQRankSum=4.706;DP=456;FS=6.748;HRun=0;HaplotypeScore=175.3240;InbreedingCoeff=-0.0919;MQ=43.96;MQ0=36;MQRankSum=0.295;QD=7.84;ReadPosRankSum=1.418;VQSLOD=2.2943;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:51.17:0,51,1592	0/0:1,0:1:3.01:0,3,60	0/0:49,0:8:19.30:0,19,335	0/0:44,0:15:28.95:0,29,831	0/0:14,0:13:27.96:0,28,688	0/0:13,0:12:32.82:0,33,660	0/0:20,0:18:30.09:0,30,712	0/1:16,13:26:99:337,0,511	0/0:8,0:8:15.05:0,15,391	0/0:19,0:19:53.97:0,54,1098	0/0:13,0:13:30.05:0,30,780	0/0:7,0:7:6.02:0,6,68	0/0:8,0:8:21.07:0,21,1157	0/0:9,0:8:18.03:0,18,455	0/0:14,0:11:20.92:0,21,447	0/0:13,0:13:36.01:0,36,771	0/0:15,0:11:24.06:0,24,429	0/0:9,0:6:15.52:0,16,223	0/0:25,0:15:35.95:0,36,1065	0/0:18,0:17:13.46:0,13,640	0/0:13,0:10:18.95:0,19,437	0/0:5,0:5:12.04:0,12,615	0/0:12,0:11:27.56:0,28,1649	0/0:12,0:10:13.40:0,13,957	0/1:18,0:17:10.10:10,0,552	0/1:20,0:17:99:295,0,293	0/0:21,0:20:39.53:0,40,827	0/1:9,0:8:60.54:61,0,87
chr10	67608918	.	TTTTTTTTTTTTTTC	T	1515.73	PASS	AB=0.976;AC=16;AF=0.286;AN=56;BaseQRankSum=7.049;DP=447;FS=13.023;HRun=0;HaplotypeScore=134.4717;InbreedingCoeff=-0.2016;MQ=43.05;MQ0=34;MQRankSum=-1.123;QD=6.32;ReadPosRankSum=5.229;VQSLOD=1.4554;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:49.62:0,50,748	0/0:1,0:1:2.04:0,2,6	0/0:48,0:8:21.88:0,22,296	0/0:44,0:14:32.89:0,33,578	0/0:13,0:12:21.04:0,21,289	0/1:16,0:15:99:153,0,132	0/1:18,0:16:27.81:28,0,143	0/1:22,0:19:32.64:213,0,33	0/0:8,0:8:11.35:0,11,95	0/1:17,0:17:58.95:59,0,201	0/1:9,9:18:28.15:28,0,172	1/1:7,0:7:6.02:75,6,0	0/0:7,0:7:20.99:0,21,751	0/0:10,0:9:11.94:0,12,156	0/1:12,0:9:38.87:39,0,121	0/1:13,0:13:79.53:80,0,194	0/0:14,0:10:16.80:0,17,157	0/1:9,0:6:56.97:57,0,140	0/1:20,0:12:44.81:45,0,303	0/1:21,0:20:64.89:65,0,219	0/0:14,0:11:12.35:0,12,87	0/0:5,0:5:12.04:0,12,379	0/0:13,0:12:30.01:0,30,1136	0/0:12,0:10:12.51:0,13,690	0/1:20,0:19:94.40:94,0,161	0/1:19,0:16:10.22:480,0,10	0/1:20,0:19:18.41:18,0,156	0/1:8,0:7:1.33:242,0,1
chr10	67608919	.	TTTTTTTTTTTTTC	T	2332.45	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=5.053;DP=448;FS=25.637;HRun=0;HaplotypeScore=125.8263;InbreedingCoeff=0.0065;MQ=43.10;MQ0=34;MQRankSum=-0.932;QD=9.72;ReadPosRankSum=4.233;VQSLOD=0.6962;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:49.58:0,50,652	0/0:1,0:1:2.92:0,3,17	0/0:49,0:9:21.75:0,22,238	0/0:44,0:14:27.93:0,28,489	0/0:13,0:12:20.06:0,20,250	0/1:16,0:15:45.30:264,0,45	0/1:18,0:16:61.33:61,0,79	1/1:22,0:19:36.81:331,37,0	0/0:8,0:8:0.70:0,1,32	0/1:15,0:15:78.49:137,0,78	0/1:18,0:18:45.28:45,0,104	1/1:8,0:8:5.86:102,6,0	0/0:7,0:7:20.99:0,21,697	0/0:10,0:9:2.62:0,3,98	0/1:12,0:9:54.46:56,0,54	0/1:13,0:13:99:130,0,106	0/0:13,0:9:13.53:0,14,115	0/1:9,0:6:40.79:41,0,126	0/1:20,0:12:89.82:90,0,187	0/1:22,0:21:92.66:93,0,141	0/0:15,0:12:6.38:0,6,41	0/0:5,0:5:12.04:0,12,332	0/0:13,0:12:29.93:0,30,1029	0/0:12,0:10:12.51:0,13,632	0/1:22,0:21:70.66:158,0,71	1/1:6,13:16:29.04:657,29,0	0/1:18,0:17:32.76:33,0,103	1/1:2,6:7:8.89:307,9,0
chr10	67608920	.	TTTTTTTTTTTTC	T	2789.15	PASS	AB=0.960;AC=23;AF=0.411;AN=56;BaseQRankSum=2.510;DP=427;FS=19.299;HRun=0;HaplotypeScore=112.6017;InbreedingCoeff=0.1038;MQ=44.96;MQ0=33;MQRankSum=0.159;QD=11.67;ReadPosRankSum=4.056;VQSLOD=0.8884;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:49.22:0,49,568	0/0:1,0:1:2.22:0,2,7	0/0:50,0:10:21.95:0,22,202	0/0:44,0:14:30.71:0,31,448	0/0:11,0:11:20.05:0,20,227	1/1:14,2:15:11.39:427,11,0	0/1:17,0:15:30.49:101,0,30	1/1:17,0:14:38.49:298,38,0	1/1:8,0:8:7.59:50,8,0	0/1:9,1:10:47.91:182,0,48	0/1:17,0:17:55.69:63,0,56	1/1:8,0:8:5.98:131,6,0	0/0:7,0:7:20.99:0,21,630	0/1:9,0:8:39.04:39,0,59	0/1:10,1:9:8.89:100,0,9	0/1:13,0:13:31.52:241,0,32	0/0:13,0:9:12.06:0,12,76	0/1:9,0:6:37.51:38,0,109	0/1:13,5:12:52.13:154,0,52	0/1:23,0:22:75.33:128,0,75	0/0:14,0:11:3.40:0,3,18	0/0:5,0:5:12.04:0,12,301	0/0:13,0:12:29.93:0,30,949	0/0:12,0:10:12.51:0,13,576	0/1:21,1:21:35.57:180,0,36	1/1:16,0:13:29.95:532,30,0	0/1:18,0:17:30.69:56,0,31	1/1:7,0:6:9.03:254,9,0
chr10	67608921	.	TTTTTTTTTTTC	T	3430.28	PASS	AB=0.850;AC=28;AF=0.500;AN=56;BaseQRankSum=1.209;DP=414;FS=14.665;HRun=0;HaplotypeScore=102.9591;InbreedingCoeff=0.3765;MQ=46.67;MQ0=33;MQRankSum=-1.406;QD=15.11;ReadPosRankSum=4.023;VQSLOD=1.0779;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:46.89:0,47,455	0/0:1,0:1:2.80:0,3,13	0/0:50,0:11:22.62:0,23,182	0/0:43,0:14:28.23:0,28,390	0/0:10,0:10:17.94:0,18,185	1/1:14,2:15:29.53:470,30,0	1/1:7,9:14:3.66:172,4,0	1/1:16,0:13:38.63:288,39,0	1/1:8,0:8:0.89:45,1,0	0/1:7,1:8:43:207,0,43	0/1:15,0:15:24.37:89,0,24	1/1:0,8:8:5.81:178,6,0	0/0:7,0:7:20.98:0,21,559	0/1:8,0:7:30.66:31,0,41	1/1:10,0:9:13.06:165,13,0	1/1:11,1:12:1.44:381,1,0	0/0:12,0:8:13.43:0,13,89	0/1:9,0:6:50.54:51,0,100	1/1:18,0:12:13.93:175,14,0	0/1:7,16:22:55.38:178,0,55	0/0:6,8:11:2.84:0,3,9	0/0:5,0:5:12.04:0,12,264	0/0:15,0:14:35.86:0,36,884	0/0:12,0:10:12.04:0,12,519	1/1:6,13:18:2.39:188,2,0	1/1:16,0:13:29.83:492,30,0	0/1:7,11:17:12.42:83,0,12	1/1:7,0:6:9.03:236,9,0
chr10	67609029	.	C	CT	154.97	PASS	AB=1.000;AC=6;AF=0.107;AN=56;BaseQRankSum=4.309;DP=398;FS=0.000;HRun=8;HaplotypeScore=64.7537;InbreedingCoeff=0.7158;MQ=70.75;MQ0=11;MQRankSum=-2.455;QD=7.75;ReadPosRankSum=-5.256;VQSLOD=-0.1047;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,4:10:18.83:177,19,0	0/1:1,0:1:0:0,0,0	0/0:34,0:12:9.85:0,10,122	0/0:36,0:16:12.40:0,12,151	1/1:1,2:3:8.98:89,9,0	0/0:10,0:10:24.01:0,24,218	0/0:24,0:23:32.05:0,32,280	0/0:32,0:28:60.02:0,60,549	0/0:13,0:13:14.99:0,15,137	0/0:15,0:15:33.49:0,33,301	0/0:9,0:9:14.99:0,15,133	0/0:10,0:9:14.95:0,15,133	0/0:18,0:17:27:0,27,242	0/0:9,0:9:11.94:0,12,108	0/0:13,0:13:30:0,30,271	0/0:13,0:13:30:0,30,270	0/0:13,0:12:11.65:0,12,110	0/1:5,0:5:0.01:0,0,0	0/0:21,0:20:31.36:0,31,412	0/0:16,0:16:36:0,36,329	0/0:19,0:18:29.95:0,30,265	0/0:4,0:4:3:0,3,27	0/0:9,0:9:21.01:0,21,192	0/0:14,0:14:32.97:0,33,289	0/0:12,0:11:27.01:0,27,247	0/0:17,0:17:36.82:0,37,297	0/0:10,0:9:11.55:0,12,109	0/0:4,0:4:9:0,9,81
chr10	67609057	.	C	CT	1454.76	PASS	AB=0.907;AC=28;AF=0.500;AN=56;BaseQRankSum=-2.902;DP=405;FS=4.583;HRun=14;HaplotypeScore=49.7535;InbreedingCoeff=0.4587;MQ=48.75;MQ0=31;MQRankSum=-0.570;QD=6.19;ReadPosRankSum=0.385;VQSLOD=1.9371;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:18:5.83:6,0,14	0/1:2,0:2:0.03:0,0,0	0/0:32,0:5:0.46:0,0,1	0/1:20,0:10:0.85:1,0,21	0/0:11,0:9:1.74:0,2,8	1/1:5,7:12:20.98:205,21,0	0/1:12,9:18:34.67:51,0,35	0/0:25,0:18:14.42:0,14,108	1/1:2,2:3:3.01:32,3,0	1/1:15,4:19:4.77:203,5,0	0/1:9,1:6:12.50:53,0,12	1/1:4,0:4:3:26,3,0	0/0:12,0:13:10.19:0,10,64	1/1:8,0:7:5.65:31,6,0	1/1:8,6:12:6.02:64,6,0	0/1:9,2:9:6.31:118,0,6	0/0:20,0:16:7.70:0,8,34	0/0:7,0:7:0.30:0,0,3	1/1:9,6:10:15.02:151,15,0	1/1:12,10:22:17.94:159,18,0	1/1:4,11:14:15.51:158,16,0	0/0:10,0:9:14.98:0,15,122	0/0:10,0:9:11.91:0,12,89	0/0:17,0:16:22.96:0,23,175	1/1:5,5:10:8.35:102,8,0	0/0:13,0:15:30.06:0,30,213	1/1:5,13:17:27.02:271,27,0	0/0:7,0:5:6.87:0,7,51
chr10	67609203	.	T	TG	1800.38	PASS	AB=0.662;AC=23;AF=0.460;AN=50;BaseQRankSum=-6.740;DP=344;FS=4.345;HRun=10;HaplotypeScore=82.4617;InbreedingCoeff=0.5809;MQ=68.93;MQ0=3;MQRankSum=-2.030;QD=10.17;ReadPosRankSum=-3.133;VQSLOD=2.3800;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:2,0:22:39.77:0,40,116	0/0:0,0:12:20.37:0,20,60	0/0:19,1:12:3.26:0,3,39	0/0:8,0:5:7.99:0,8,53	0/0:3,0:17:27.36:0,27,80	1/1:10,2:14:14.70:112,15,0	0/1:7,10:17:8.54:278,0,9	./.	0/1:2,3:5:15.49:55,0,15	1/1:6,4:9:11.97:106,12,0	1/1:7,8:15:12.01:115,12,0	1/1:1,11:11:19.86:195,20,0	0/0:15,0:14:32.64:0,33,244	1/1:2,5:7:9.02:95,9,0	0/1:4,10:14:13.18:124,0,13	1/1:1,10:11:17.62:150,18,0	0/0:3,0:22:34.63:0,35,102	0/0:2,0:19:34.63:0,35,102	0/1:9,4:14:0.42:153,0,0	1/1:3,10:13:20.72:180,21,0	1/1:10,9:19:18:178,18,0	0/0:9,0:9:17.94:0,18,141	0/0:10,0:10:14.34:0,14,106	0/0:9,0:9:23.97:0,24,197	1/1:4,7:12:12.03:127,12,0	./.	0/1:9,5:14:37.25:120,0,37	./.
chr10	67610545	.	GCA	G	1366.17	PASS	AB=0.978;AC=31;AF=0.620;AN=50;BaseQRankSum=4.568;DP=418;FS=5.294;HRun=0;HaplotypeScore=62.4641;InbreedingCoeff=-0.0063;MQ=64.03;MQ0=22;MQRankSum=1.083;QD=4.09;ReadPosRankSum=2.186;VQSLOD=1.4747;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:10,5:13:1.82:88,2,0	0/1:1,0:1:0:0,0,0	./.	0/0:26,0:11:0:0,0,0	./.	0/1:11,1:10:33.59:42,0,34	0/1:17,1:26:18.60:19,0,136	1/1:7,0:11:8.36:56,8,0	0/0:12,0:20:5.71:0,6,31	0/1:12,0:12:9.22:9,0,100	1/1:6,0:6:5.85:35,6,0	0/1:14,0:14:50:50,0,71	0/1:14,0:13:2.96:3,0,87	1/1:13,1:12:5.93:51,6,0	0/1:15,1:16:14.17:68,0,14	0/1:12,0:12:17.14:17,0,80	1/1:18,15:27:25.64:424,26,0	1/1:24,12:32:12.43:330,12,0	0/1:6,0:6:9.56:10,0,14	./.	1/1:26,0:26:8.62:51,9,0	0/0:5,0:5:3.01:0,3,39	0/0:4,0:4:3.01:0,3,43	0/1:38,3:40:1.10:1,0,747	1/1:6,0:6:2.90:16,3,0	1/1:9,4:11:15.51:160,16,0	0/1:8,0:8:11.14:11,0,13	1/1:3,2:4:6.02:65,6,0
chr10	67610565	.	A	ACG	1025.89	PASS	AB=0.977;AC=15;AF=0.278;AN=54;BaseQRankSum=6.109;DP=416;FS=0.608;HRun=0;HaplotypeScore=67.8720;InbreedingCoeff=-0.1137;MQ=46.55;MQ0=29;MQRankSum=1.246;QD=4.54;ReadPosRankSum=6.044;VQSLOD=1.5718;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:11:20.57:0,21,159	0/0:3,0:3:8.63:0,9,50	0/0:15,0:2:2.96:0,3,19	0/1:13,0:1:0:0,0,0	./.	0/0:14,0:11:0.24:0,0,105	0/0:27,0:24:21.99:0,22,215	0/0:12,0:9:17.80:0,18,132	0/1:20,0:20:25.61:26,0,67	0/0:17,0:17:22.35:0,22,306	1/1:5,0:5:5.85:35,6,0	0/1:12,0:12:51.06:51,0,73	0/1:12,0:10:25.87:26,0,80	0/1:19,0:17:23.53:24,0,91	0/1:18,0:18:64.47:64,0,77	0/1:14,0:12:30.47:30,0,136	0/1:30,6:30:49.03:503,0,49	0/1:29,4:29:64.72:351,0,65	0/0:9,0:8:2.84:0,3,92	0/0:3,0:3:3:0,3,25	0/1:31,0:26:24.98:37,0,25	0/0:5,0:5:9.01:0,9,90	0/0:4,0:4:6.01:0,6,71	0/0:44,0:43:99:0,111,1251	1/1:5,0:4:2.92:17,3,0	0/0:15,0:12:26.68:0,27,217	0/1:8,0:8:5.54:6,0,26	0/0:7,0:5:13.41:0,13,88
chr10	67610579	.	ACG	A	1236.59	PASS	AB=0.897;AC=23;AF=0.479;AN=48;BaseQRankSum=3.155;DP=393;FS=3.976;HRun=0;HaplotypeScore=71.4885;InbreedingCoeff=-0.2837;MQ=44.67;MQ0=27;MQRankSum=0.744;QD=4.31;ReadPosRankSum=2.395;VQSLOD=2.0727;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:12,0:11:14.78:15,0,23	0/1:3,0:3:16.91:17,0,17	./.	./.	./.	0/1:9,2:8:39.57:40,0,42	0/0:31,0:28:12.84:0,13,160	0/0:12,0:8:0.45:0,0,0	0/1:17,0:17:15.63:16,0,17	0/1:13,2:13:62.21:67,0,62	1/1:2,3:5:6.02:85,6,0	0/1:11,6:17:99:142,0,101	0/1:8,5:10:38.25:38,0,84	0/1:12,5:14:33.47:40,0,33	1/1:9,6:15:17.46:177,17,0	0/1:8,4:10:43.29:90,0,43	0/1:36,0:30:84.84:85,0,217	0/1:29,0:25:82.25:82,0,109	0/1:13,1:13:12.23:36,0,12	./.	0/1:30,2:26:3.59:123,0,4	0/0:8,0:8:10.67:0,11,64	0/0:4,0:4:5.91:0,6,49	0/0:42,0:41:67.32:0,67,990	0/1:6,1:6:14.98:36,0,15	1/1:15,0:12:25.24:180,25,0	0/1:8,0:8:30.03:30,0,34	1/1:9,0:7:14.04:90,14,0
chr10	67610618	.	CACGT	C	2502.06	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=0.872;DP=367;FS=8.999;HRun=0;HaplotypeScore=72.3487;InbreedingCoeff=0.8810;MQ=51.99;MQ0=12;MQRankSum=-0.014;QD=11.12;ReadPosRankSum=-1.431;VQSLOD=1.2266;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:7:14.97:0,15,120	1/1:5,0:5:14.98:144,15,0	0/0:13,0:6:1.33:0,1,67	0/0:16,0:4:4.50:0,5,75	0/0:9,0:9:23.96:0,24,196	1/1:10,0:10:16.74:121,17,0	1/1:26,0:24:41.68:291,42,0	0/0:11,0:10:30.02:0,30,273	1/1:17,0:17:24.36:187,24,0	1/1:9,0:8:15.02:141,15,0	1/1:4,0:4:11.98:99,12,0	1/1:12,0:12:16.03:108,16,0	0/0:15,0:13:32.95:0,33,351	1/1:17,0:15:31.70:240,32,0	1/1:10,0:10:8.98:74,9,0	1/1:11,0:10:17.98:150,18,0	1/1:33,0:32:53.12:375,53,0	1/1:22,0:22:26.88:261,27,0	1/1:1,5:6:14.93:113,15,0	1/1:5,0:5:14.98:125,15,0	1/1:22,0:19:20.01:155,20,0	0/0:8,0:8:20.61:0,21,197	0/0:3,0:3:6.01:0,6,66	0/0:31,0:31:77.20:0,77,1117	1/1:7,0:6:7.55:54,8,0	0/0:18,0:16:13.83:0,14,230	1/1:9,0:8:13.39:77,13,0	0/0:11,0:11:13.67:0,14,96
chr10	67612065	.	GGAGAGAGAGA	G	1210.50	PASS	AC=24;AF=0.545;AN=44;BaseQRankSum=-0.380;DP=296;FS=3.866;HRun=0;HaplotypeScore=86.3657;InbreedingCoeff=0.6401;MQ=55.47;MQ0=18;MQRankSum=-5.214;QD=8.97;ReadPosRankSum=0.649;VQSLOD=1.7392;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:3:2.94:0,3,18	0/0:3,0:3:3.01:0,3,30	./.	./.	./.	1/1:10,4:14:8.95:97,9,0	1/1:7,4:11:6.02:109,6,0	0/0:8,0:7:1.55:0,2,4	1/1:6,3:9:5.98:109,6,0	1/1:6,5:11:11.01:290,11,0	0/0:8,4:12:0.15:0,0,0	1/1:7,7:15:8.90:71,9,0	0/0:9,0:8:21.05:0,21,373	1/1:2,3:6:11.95:158,12,0	1/1:7,2:8:11.94:159,12,0	1/1:7,4:11:5.94:41,6,0	0/0:10,0:7:5.98:0,6,55	0/0:9,0:8:2.98:0,3,21	1/1:13,0:12:11.88:160,12,0	1/1:9,1:9:4.26:64,4,0	./.	0/0:10,0:16:12.03:0,12,167	0/0:13,0:22:12.50:0,12,301	0/0:8,0:16:12.03:0,12,247	1/1:11,5:15:7.96:45,8,0	./.	1/1:10,0:10:3.01:63,3,0	./.
chr10	67612066	.	GAGAGAGAGA	G	842.15	PASS	AB=0.898;AC=15;AF=0.300;AN=50;BaseQRankSum=3.688;DP=279;FS=0.823;HRun=0;HaplotypeScore=79.0605;InbreedingCoeff=0.1835;MQ=54.00;MQ0=18;MQRankSum=-5.109;QD=7.94;ReadPosRankSum=-2.677;VQSLOD=1.3182;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:3,0:3:2.08:0,2,16	0/0:3,0:3:2.97:0,3,20	0/0:12,0:8:17.31:0,17,154	0/0:17,0:5:11.91:0,12,87	./.	0/1:14,0:14:4.51:5,0,196	0/1:10,0:10:88.44:88,0,107	1/1:6,0:5:1.55:21,2,0	0/1:9,0:9:66.66:67,0,67	0/1:9,0:9:13.36:167,0,13	0/0:11,0:11:16.22:0,16,130	0/0:13,0:14:12.58:0,13,116	0/0:9,0:8:24.07:0,24,409	0/1:5,1:6:52.04:101,0,52	0/1:7,2:8:97.14:97,0,102	0/0:10,1:11:3.13:0,3,150	0/0:5,0:4:5.94:0,6,41	0/0:3,0:8:2.46:0,2,12	1/1:4,6:9:15.38:265,15,0	1/1:5,0:9:9.07:78,9,0	0/1:5,1:11:0:0,0,0	0/0:16,0:16:17.87:0,18,274	0/0:21,0:21:30.52:0,31,472	0/0:19,0:16:21.05:0,21,356	0/0:15,0:15:6.18:0,6,85	./.	1/1:2,7:9:3.01:98,3,0	./.
chr10	67612120	.	T	TACAC	1195.70	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=0.336;DP=383;FS=35.452;HRun=0;HaplotypeScore=103.5967;InbreedingCoeff=0.6746;MQ=52.26;MQ0=12;MQRankSum=-3.046;QD=14.76;ReadPosRankSum=0.542;VQSLOD=1.4596;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:15,6:21:25.18:548,25,0	0/1:4,0:4:0:0,0,0	0/0:30,0:8:17.23:0,17,141	0/0:36,0:11:2.98:0,3,150	1/1:7,4:11:5.48:147,5,0	0/0:10,0:10:15.04:0,15,225	0/0:9,0:9:6.02:0,6,101	1/1:21,0:20:6.26:38,6,0	0/0:5,0:5:5.38:0,5,45	0/0:16,0:16:26.34:0,26,423	0/0:9,0:8:8.52:0,9,151	0/0:10,0:10:3.01:0,3,50	0/0:11,0:11:12.91:0,13,166	0/0:9,0:9:13.85:0,14,168	0/0:12,0:11:13.60:0,14,205	0/0:7,0:7:6.02:0,6,87	1/1:6,8:13:17.46:377,17,0	1/1:8,2:9:15:240,15,0	0/0:13,0:13:5.56:0,6,276	0/0:9,0:9:12.01:0,12,202	0/0:22,0:21:23.63:0,24,384	0/0:14,0:14:14.40:0,14,177	0/0:15,0:15:17.64:0,18,240	0/0:15,0:14:12.91:0,13,172	0/0:13,0:13:14.92:0,15,252	0/0:11,0:11:5.64:0,6,52	0/0:10,0:10:21.05:0,21,303	0/0:13,0:13:5.65:0,6,56
chr10	67612162	.	CGG	C	645.86	PASS	AB=0.964;AC=8;AF=0.148;AN=54;BaseQRankSum=-0.093;DP=329;FS=10.552;HRun=11;HaplotypeScore=51.0353;InbreedingCoeff=0.4163;MQ=66.96;MQ0=7;MQRankSum=-0.082;QD=8.85;ReadPosRankSum=4.100;VQSLOD=0.0181;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,16:24:44.03:428,44,0	0/0:1,0:1:3.01:0,3,46	0/0:35,0:11:22.38:0,22,256	0/0:30,0:12:20.75:0,21,246	1/1:5,12:17:30.04:319,30,0	0/0:8,0:8:18.01:0,18,197	0/0:10,0:13:16.97:0,17,133	0/0:13,0:13:15.05:0,15,230	0/0:6,0:8:3.67:0,4,23	0/1:5,0:6:0.03:0,0,0	0/0:7,0:7:0.47:0,0,1	0/0:8,0:9:4.53:0,5,16	0/1:10,1:12:10.96:11,0,152	./.	0/0:5,0:6:3:0,3,27	0/0:7,0:8:9.48:0,9,105	0/0:19,0:20:44.59:0,45,610	0/0:9,0:10:20.53:0,21,248	0/0:7,0:7:8.97:0,9,82	0/1:6,0:6:0:0,0,0	0/0:17,0:19:17.98:0,18,179	0/1:7,0:7:14.26:14,0,85	0/0:7,0:7:9.01:0,9,112	0/0:14,0:16:35.08:0,35,447	0/0:12,0:12:14.68:0,15,104	0/0:7,0:7:5.38:0,5,54	0/0:4,0:6:2.54:0,3,28	0/0:5,0:6:14.54:0,15,189
chr10	67613284	.	CAT	C	944.92	PASS	AC=30;AF=0.682;AN=44;BaseQRankSum=2.885;DP=197;FS=16.680;HRun=0;HaplotypeScore=38.5865;InbreedingCoeff=0.6738;MQ=51.87;MQ0=10;MQRankSum=1.161;QD=10.16;ReadPosRankSum=-1.982;VQSLOD=1.0951;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:20:20.96:0,21,169	1/1:9,0:9:14.27:106,14,0	0/0:15,0:4:6.01:0,6,62	0/0:8,0:1:3:0,3,25	0/0:24,0:24:48.40:0,48,523	1/1:5,0:5:5.98:47,6,0	./.	1/1:8,0:8:18.02:164,18,0	1/1:1,1:1:2.99:24,3,0	1/1:3,0:3:2.99:24,3,0	1/1:3,0:2:2.99:24,3,0	1/1:0,5:5:5.99:48,6,0	0/0:4,0:4:9.02:0,9,120	1/1:1,0:2:2.37:8,2,0	./.	1/1:6,0:6:5.99:48,6,0	1/1:13,0:12:13.96:95,14,0	1/1:17,0:16:20.55:163,21,0	1/1:2,0:3:5.99:48,6,0	./.	./.	./.	0/0:8,0:8:15.01:0,15,171	0/0:3,0:3:8.98:0,9,114	./.	1/1:5,0:5:11.97:100,12,0	1/1:9,0:9:17.83:127,18,0	1/1:2,0:2:6.02:78,6,0
chr10	67613332	.	CATATATATATATATATATATATATATATATATAT	C	231.55	PASS	AB=0.818;AC=5;AF=0.278;AN=18;BaseQRankSum=2.679;DP=130;FS=6.690;HRun=0;HaplotypeScore=101.7081;MQ=38.82;MQ0=19;MQRankSum=-0.765;QD=3.68;ReadPosRankSum=2.105;VQSLOD=1.5018;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:11,8:19:0:0,0,0	1/1:3,0:6:6.02:264,6,0	./.	./.	0/1:18,3:20:0:0,0,0	./.	./.	0/0:7,0:5:9.01:0,9,154	./.	./.	./.	./.	./.	./.	./.	./.	0/0:17,0:14:12.51:0,13,494	0/1:14,0:14:46.65:47,0,207	0/0:3,0:2:3.01:0,3,142	./.	./.	./.	./.	./.	./.	./.	0/0:3,0:2:3.01:0,3,361	0/0:8,0:6:9.50:0,10,755
chr10	67613607	.	T	TGG	725.55	PASS	AB=0.821;AC=6;AF=0.107;AN=56;BaseQRankSum=-2.817;DP=654;FS=0.000;HRun=9;HaplotypeScore=96.2384;InbreedingCoeff=0.5880;MQ=73.75;MQ0=2;MQRankSum=2.410;QD=10.22;ReadPosRankSum=-4.124;VQSLOD=0.2968;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,114,1192	0/0:11,0:12:29.81:0,30,299	0/0:38,0:29:18.11:0,18,244	0/1:18,0:16:39.81:40,0,176	0/0:29,0:31:80.89:0,81,805	0/0:26,0:25:66.13:0,66,697	0/0:21,0:21:51.06:0,51,526	1/1:12,14:28:39.05:498,39,0	0/0:31,0:31:81.17:0,81,852	0/0:13,0:13:36.04:0,36,369	0/0:15,0:15:42.10:0,42,446	0/0:20,0:20:51.12:0,51,542	0/0:21,0:21:63.14:0,63,662	0/0:30,0:30:81.10:0,81,838	0/0:34,0:35:90.11:0,90,1004	0/0:28,0:28:75.12:0,75,775	0/0:35,0:36:92.90:0,93,960	0/0:12,0:12:33.07:0,33,351	0/0:21,0:21:54.12:0,54,567	0/0:13,0:13:24.05:0,24,255	0/0:41,0:41:99:0,114,1203	0/0:14,0:14:36.08:0,36,377	0/0:10,0:10:12:0,12,128	0/0:37,0:37:99:0,102,1073	0/0:9,0:9:21.05:0,21,223	0/1:10,7:18:42.82:181,0,43	0/0:25,0:25:63.13:0,63,670	1/1:1,5:6:9.03:138,9,0
chr10	67614394	.	ACAT	A	2531.21	PASS	AB=0.528;AC=5;AF=0.089;AN=56;BaseQRankSum=10.462;DP=819;FS=1.047;HRun=0;HaplotypeScore=109.2217;InbreedingCoeff=0.7725;MQ=77.76;MQ0=0;MQRankSum=-4.501;QD=36.68;ReadPosRankSum=-0.724;VQSLOD=3.8665;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,141,3016	0/0:17,0:17:51.16:0,51,1083	0/0:38,0:34:90.31:0,90,1911	0/0:32,0:31:81.28:0,81,1723	0/0:23,0:23:66.23:0,66,1450	0/0:16,0:16:42.13:0,42,886	0/0:35,0:35:99:0,102,2220	1/1:6,28:34:84.28:1325,84,0	0/0:32,0:32:93.30:0,93,2010	0/0:39,0:38:99:0,114,2459	0/0:16,0:16:48.15:0,48,1009	0/0:24,0:24:69.24:0,69,1523	0/0:23,0:23:63.19:0,63,1347	0/0:36,0:36:99:0,102,2210	0/0:25,0:25:69.24:0,69,1507	0/0:32,0:32:87.28:0,87,1880	0/0:31,0:31:90.31:0,90,1925	0/0:37,0:37:99:0,102,2201	0/0:30,0:30:84.28:0,84,1755	0/0:26,0:26:69.24:0,69,1523	0/0:52,0:52:99:0,148,3205	0/0:24,0:24:66.23:0,66,1416	0/0:17,0:17:45.15:0,45,990	0/0:36,0:36:99:0,99,2159	0/0:19,0:19:57.18:0,57,1217	0/1:3,25:28:51.28:1093,0,51	0/0:39,0:39:99:0,111,2441	1/1:0,7:7:15.05:241,15,0
chr10	67614945	.	GT	G	17755.89	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=7.483;DP=737;FS=3.461;HRun=5;HaplotypeScore=78.4181;InbreedingCoeff=0.9999;MQ=86.13;MQ0=0;MQRankSum=-5.395;QD=30.67;ReadPosRankSum=4.153;VQSLOD=5.5203;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,35:35:99:1122,99,0	1/1:1,11:12:33.09:374,33,0	0/0:27,0:27:66.21:0,66,857	0/0:22,0:22:57.18:0,57,754	1/1:1,31:32:90.26:1021,90,0	1/1:1,23:24:63.18:715,63,0	1/1:2,17:19:48.14:545,48,0	1/1:7,25:32:75.20:841,75,0	1/1:0,20:20:54.15:612,54,0	1/1:1,26:27:78.22:885,78,0	1/1:1,22:23:57.16:646,57,0	1/1:0,34:34:96.27:1089,96,0	0/0:23,0:23:69.23:0,69,942	1/1:2,24:26:69.19:783,69,0	1/1:1,31:32:90.26:1021,90,0	1/1:1,23:24:66.19:749,66,0	1/1:2,36:38:99:1191,105,0	1/1:3,11:14:33.09:374,33,0	1/1:0,27:27:78.17:854,78,0	1/1:0,30:30:87.25:987,87,0	1/1:4,33:37:99:1123,99,0	0/0:25,0:25:75.24:0,75,1010	0/0:27,0:27:75.24:0,75,1007	0/0:34,0:34:99:0,99,1304	1/1:0,20:20:54.02:613,54,0	1/1:3,33:36:99:1122,99,0	1/1:1,21:22:54.15:613,54,0	1/1:0,15:15:42.12:476,42,0
chr10	67616141	.	CT	C	777.75	PASS	AB=1.000;AC=7;AF=0.135;AN=52;BaseQRankSum=-3.904;DP=280;FS=5.583;HRun=11;HaplotypeScore=48.1462;InbreedingCoeff=0.5597;MQ=68.85;MQ0=2;MQRankSum=0.441;QD=13.18;ReadPosRankSum=-2.285;VQSLOD=2.6762;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:13:29.07:0,29,177	0/0:6,0:6:9.02:0,9,96	0/0:27,0:11:6.16:0,6,145	0/0:22,0:6:5.69:0,6,47	0/0:4,0:4:5.81:0,6,34	0/0:11,0:11:25.94:0,26,152	0/1:4,0:4:9.54:10,0,26	1/1:8,20:29:55.94:446,56,0	0/0:6,0:6:8.34:0,8,37	0/0:12,0:12:19.12:0,19,86	0/0:3,0:3:8.10:0,8,33	0/0:5,0:5:6.59:0,7,40	0/0:6,0:6:6.02:0,6,64	0/0:2,0:2:2.90:0,3,16	0/0:2,0:2:2.94:0,3,18	0/0:6,0:6:6.83:0,7,51	0/0:23,0:23:45.11:0,45,473	0/0:15,0:14:27.03:0,27,276	0/0:19,0:19:15.67:0,16,144	0/0:7,0:7:14.44:0,14,81	0/0:5,0:5:11.32:0,11,58	./.	0/0:4,0:4:9.02:0,9,95	./.	0/0:12,0:12:28.47:0,28,157	1/1:3,7:10:23.94:192,24,0	0/0:7,0:7:14.42:0,14,80	1/1:3,13:16:32.96:271,33,0
chr10	67616160	.	ATTATTTAT	A	2240.70	PASS	AC=30;AF=0.789;AN=38;BaseQRankSum=0.261;DP=232;FS=0.000;HRun=0;HaplotypeScore=71.5403;InbreedingCoeff=0.5229;MQ=60.53;MQ0=4;MQRankSum=-1.374;QD=14.84;ReadPosRankSum=1.488;VQSLOD=1.2722;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:3,0:11:18.01:0,18,201	1/1:2,0:3:3.01:56,3,0	0/0:27,0:9:2.80:0,3,13	./.	0/0:0,0:3:9.01:0,9,92	1/1:6,7:13:15.01:322,15,0	./.	1/1:28,0:26:12.04:209,12,0	./.	1/1:5,1:6:3.01:75,3,0	./.	1/1:2,3:5:3.01:75,3,0	./.	./.	1/1:0,3:3:3.01:75,3,0	1/1:2,1:3:6.02:151,6,0	1/1:11,0:22:18:327,18,0	1/1:7,0:14:6.02:112,6,0	1/1:15,1:16:3.01:75,3,0	1/1:3,2:5:5.94:41,6,0	./.	./.	0/0:5,0:5:6.02:0,6,222	./.	1/1:5,4:9:12:246,12,0	1/1:5,2:7:6.02:151,6,0	1/1:3,3:6:6.01:151,6,0	1/1:8,3:11:12.04:302,12,0
chr10	67617092	.	CG	C	1777.85	PASS	AB=0.517;AC=5;AF=0.089;AN=56;BaseQRankSum=6.802;DP=549;FS=1.178;HRun=1;HaplotypeScore=54.2118;InbreedingCoeff=0.8369;MQ=80.95;MQ0=0;MQRankSum=-1.539;QD=37.04;ReadPosRankSum=-2.784;VQSLOD=2.8813;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:96.29:0,96,1477	0/0:5,0:5:15.05:0,15,239	0/0:14,0:14:31.81:0,32,509	0/0:13,0:13:33.10:0,33,468	0/0:11,0:11:33.08:0,33,500	0/0:18,0:18:54.18:0,54,862	0/0:45,0:45:99:0,135,2125	1/1:0,23:23:69.23:964,69,0	0/0:19,0:19:57.19:0,57,909	0/0:20,0:20:57.15:0,57,882	0/0:4,0:4:12.04:0,12,192	0/0:31,0:31:93.32:0,93,1482	0/0:15,0:15:45.15:0,45,713	0/0:28,0:28:84.29:0,84,1340	0/0:26,0:26:78.27:0,78,1239	0/0:11,0:11:33.11:0,33,527	0/0:19,0:19:57.19:0,57,910	0/0:26,0:26:78.22:0,78,1216	0/0:21,0:21:63.21:0,63,997	0/0:4,0:4:12.04:0,12,189	0/0:54,0:54:99:0,160,2522	0/0:14,0:14:42.12:0,42,645	0/0:8,0:8:21.07:0,21,334	0/0:36,0:36:99:0,102,1585	0/0:15,0:15:45.15:0,45,719	0/1:1,14:15:2.70:524,0,3	0/0:12,0:12:33.10:0,33,502	1/1:0,10:10:30.10:419,30,0
chr10	67620321	.	AGT	A	979.91	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.181;DP=785;FS=3.637;HRun=0;HaplotypeScore=92.8060;InbreedingCoeff=0.9995;MQ=83.39;MQ0=0;MQRankSum=0.410;QD=32.66;ReadPosRankSum=-3.685;VQSLOD=4.5109;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,144,2526	0/0:11,0:11:30.09:0,30,511	0/0:25,0:25:67.77:0,68,1083	0/0:23,0:23:54.05:0,54,858	0/0:35,0:35:96.33:0,96,1728	0/0:32,0:32:90.29:0,90,1591	0/0:22,0:22:51.16:0,51,876	1/1:4,26:30:78.25:1075,78,0	0/0:18,0:18:54.19:0,54,972	0/0:30,0:30:90.30:0,90,1577	0/0:20,0:20:60.21:0,60,1080	0/0:24,0:24:72.25:0,72,1292	0/0:30,0:30:84.29:0,84,1508	0/0:28,0:28:84.29:0,84,1501	0/0:31,0:31:90.31:0,90,1620	0/0:35,0:35:93.32:0,93,1669	0/0:29,0:29:84.29:0,84,1497	0/0:16,0:16:45.15:0,45,809	0/0:31,0:31:93.31:0,93,1641	0/0:28,0:28:81.28:0,81,1452	0/0:45,0:45:99:0,129,2286	0/0:33,0:33:99:0,99,1775	0/0:23,0:23:69.22:0,69,1194	0/0:26,0:26:78.27:0,78,1396	0/0:19,0:19:54.19:0,54,972	0/0:27,0:27:75.26:0,75,1347	0/0:34,0:34:99:0,102,1823	0/0:31,0:31:90.29:0,90,1590
chr10	67621816	.	C	CT	2824.47	PASS	AB=0.938;AC=11;AF=0.196;AN=56;BaseQRankSum=-9.410;DP=701;FS=0.393;HRun=10;HaplotypeScore=78.7460;InbreedingCoeff=0.8540;MQ=70.89;MQ0=0;MQRankSum=0.262;QD=19.21;ReadPosRankSum=0.743;VQSLOD=4.3575;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,35:42:68.92:914,69,0	1/1:3,12:15:27.07:288,27,0	0/1:14,1:15:4.92:5,0,160	0/0:11,0:11:26.25:0,26,193	1/1:4,20:25:53.93:544,54,0	0/0:23,1:25:14.95:0,15,319	0/0:15,0:15:38.95:0,39,320	0/0:27,2:29:33.90:0,34,482	0/0:26,0:26:71.90:0,72,588	0/0:43,3:46:35.37:0,35,699	0/0:24,0:24:50.26:0,50,402	0/0:30,0:30:80.85:0,81,661	0/0:21,0:21:50.91:0,51,419	0/0:21,0:22:58.95:0,59,474	0/0:29,0:29:68.89:0,69,563	0/0:27,0:30:72.01:0,72,559	1/1:5,25:30:69.17:736,69,0	1/1:1,19:20:48.12:512,48,0	0/0:19,0:20:29.44:0,29,227	0/0:29,0:29:45.84:0,46,562	0/0:19,0:20:49.95:0,50,396	0/0:32,0:33:79.89:0,80,640	0/0:20,2:22:18.19:0,18,339	0/0:25,0:25:65.91:0,66,542	0/0:20,0:19:44.91:0,45,369	0/0:35,1:37:0.88:0,1,536	0/0:33,0:32:82.67:0,83,669	0/0:7,0:7:11.94:0,12,92
chr10	67624387	.	AC	A	440.37	PASS	AB=0.948;AC=12;AF=0.214;AN=56;BaseQRankSum=0.177;DP=347;FS=34.209;HRun=12;HaplotypeScore=50.0871;InbreedingCoeff=0.3850;MQ=79.85;MQ0=0;MQRankSum=0.659;QD=3.64;ReadPosRankSum=4.428;VQSLOD=-0.4822;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,0:11:1.21:3,1,0	1/1:10,4:14:11.87:87,12,0	0/0:20,0:17:9.88:0,10,194	0/1:17,1:17:12.02:12,0,81	0/0:6,0:13:7.30:0,7,56	0/0:8,0:8:8.97:0,9,74	0/0:16,0:18:11.69:0,12,66	0/0:20,0:21:14.71:0,15,123	0/0:8,0:8:11.63:0,12,78	0/0:9,0:9:5.90:0,6,42	0/0:8,0:8:7.69:0,8,43	0/0:13,0:13:14.13:0,14,91	0/0:16,0:16:21:0,21,189	0/0:11,0:11:12.08:0,12,58	0/0:5,0:5:8.51:0,9,53	0/0:6,0:13:13.41:0,13,82	1/1:5,15:22:13.01:220,13,0	1/1:13,10:25:33.88:244,34,0	0/0:5,0:5:5.96:0,6,43	0/0:4,0:4:2.94:0,3,18	0/0:5,0:5:2.99:0,3,24	0/0:11,0:13:3.01:0,3,31	0/1:15,1:16:2.43:2,0,67	0/1:8,1:9:14.21:14,0,52	0/1:5,0:5:3.86:4,0,9	0/0:17,0:19:8.84:0,9,67	0/0:8,0:8:15.31:0,15,104	0/0:9,0:9:16.06:0,16,113
chr10	67626865	.	AGTGT	A	817.79	PASS	AB=0.907;AC=26;AF=0.520;AN=50;BaseQRankSum=3.282;DP=619;FS=8.741;HRun=0;HaplotypeScore=103.2024;InbreedingCoeff=0.5753;MQ=61.58;MQ0=15;MQRankSum=-0.957;QD=2.57;ReadPosRankSum=0.182;VQSLOD=1.1049;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:34:3.91:50,4,0	0/0:7,0:7:9.03:0,9,156	./.	./.	./.	0/0:15,2:18:8.90:0,9,44	1/1:21,4:24:5.69:92,6,0	0/0:23,0:23:3.01:0,3,39	1/1:22,0:23:6.01:74,6,0	1/1:23,4:27:13.33:201,13,0	0/1:8,1:9:0.01:0,0,0	1/1:18,5:23:6.02:92,6,0	0/0:21,0:21:17.51:0,18,208	1/1:23,3:25:3:46,3,0	1/1:12,1:14:3.01:46,3,0	0/1:19,2:21:6.58:41,0,7	0/0:20,0:30:9.50:0,10,148	0/0:15,0:25:15.05:0,15,260	1/1:16,2:18:5.98:67,6,0	1/1:13,5:19:6.02:92,6,0	1/1:40,1:41:3.01:46,3,0	0/0:16,0:16:21.04:0,21,336	0/0:9,0:8:6.02:0,6,131	0/0:34,0:36:26.78:0,27,449	1/1:12,4:16:3.01:46,3,0	0/0:25,0:26:17.79:0,18,277	1/1:18,2:20:6.02:92,6,0	0/0:9,0:8:3.01:0,3,70
chr10	67629457	.	T	TGGCACTAAA	25474.71	PASS	AB=1.000;AC=55;AF=0.982;AN=56;BaseQRankSum=-3.148;DP=291;FS=28.043;HRun=0;HaplotypeScore=219.8226;InbreedingCoeff=-0.0254;MQ=79.30;MQ0=1;MQRankSum=-2.575;QD=87.54;ReadPosRankSum=1.009;VQSLOD=3.6304;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:26:48.23:2248,48,0	1/1:6,0:6:18.03:751,18,0	1/1:5,3:12:18.26:605,18,0	0/1:12,0:12:45.66:677,0,46	1/1:9,0:9:26.98:707,27,0	1/1:8,0:7:20.10:739,20,0	1/1:16,0:16:42.09:1725,42,0	1/1:8,0:8:24.08:1038,24,0	1/1:10,0:10:29.95:921,30,0	1/1:11,0:11:29.69:1070,30,0	1/1:7,0:7:17.87:412,18,0	1/1:14,0:14:26.95:1442,27,0	1/1:8,0:8:13.81:513,14,0	1/1:7,0:7:20.98:530,21,0	1/1:17,0:17:46.37:2052,46,0	1/1:16,0:16:45.95:1264,46,0	1/1:8,0:8:8.99:313,9,0	1/1:11,0:11:30.10:1137,30,0	1/1:8,0:8:21.06:729,21,0	1/1:11,0:11:33.06:937,33,0	1/1:7,0:7:17.97:289,18,0	1/1:12,0:12:33.02:1038,33,0	1/1:8,0:8:21.03:877,21,0	1/1:9,0:9:20.99:769,21,0	1/1:8,0:8:24:669,24,0	1/1:9,0:9:27.09:934,27,0	1/1:9,0:9:24.04:712,24,0	1/1:3,0:3:9.03:377,9,0
chr10	67633323	.	TA	T	4726.74	PASS	AB=0.762;AC=41;AF=0.732;AN=56;BaseQRankSum=5.935;DP=499;FS=2.021;HRun=12;HaplotypeScore=65.4964;InbreedingCoeff=0.6176;MQ=81.34;MQ0=9;MQRankSum=-0.824;QD=12.81;ReadPosRankSum=0.113;VQSLOD=4.8572;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,1:31:45.20:0,45,650	1/1:0,5:5:11.95:93,12,0	0/1:47,3:25:28.27:28,0,97	0/0:32,0:18:1.61:0,2,118	0/0:22,2:25:21.60:0,22,589	1/1:2,11:14:31.92:238,32,0	1/1:0,16:16:32.87:255,33,0	1/1:10,22:32:62.39:469,62,0	1/1:1,12:13:23.91:186,24,0	1/1:5,11:16:29.87:232,30,0	1/1:2,13:15:32.77:248,33,0	1/1:6,11:18:7.44:231,7,0	0/0:15,0:15:27.05:0,27,273	1/1:1,11:12:26.89:209,27,0	1/1:4,12:16:2.43:202,2,0	1/1:1,7:8:14.17:100,14,0	1/1:2,22:25:58.81:447,59,0	0/1:6,12:19:8.85:200,0,9	1/1:4,10:14:29.85:227,30,0	1/1:1,12:14:34.86:257,35,0	1/1:1,7:8:11.95:93,12,0	0/1:4,2:6:31.32:31,0,76	0/0:9,0:9:24.03:0,24,232	0/0:17,1:18:24.85:0,25,428	1/1:1,15:17:37.89:285,38,0	1/1:3,12:15:10.62:230,11,0	1/1:3,20:24:55.80:420,56,0	1/1:7,5:12:5.88:46,6,0
chr10	67635757	.	T	TA	3489.91	PASS	AB=0.597;AC=30;AF=0.556;AN=54;BaseQRankSum=11.308;DP=306;FS=40.955;HRun=9;HaplotypeScore=45.6110;InbreedingCoeff=0.7837;MQ=56.05;MQ0=7;MQRankSum=0.395;QD=24.24;ReadPosRankSum=3.256;VQSLOD=1.5877;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,15:16:19.27:422,19,0	0/0:5,0:5:15:0,15,130	./.	0/0:6,0:6:11.62:0,12,99	1/1:2,14:16:42.11:465,42,0	1/1:1,7:8:21.06:232,21,0	1/1:2,3:4:6.02:66,6,0	0/0:42,0:40:99:0,114,974	1/1:0,3:3:9.02:100,9,0	1/1:1,9:9:27.07:299,27,0	1/1:1,8:9:24.06:263,24,0	1/1:0,8:8:24.06:264,24,0	0/0:11,0:11:26.99:0,27,234	1/1:4,5:8:15.04:164,15,0	1/1:0,5:5:15.04:166,15,0	1/1:0,2:2:3.01:33,3,0	0/0:26,0:26:59.92:0,60,509	0/0:31,0:26:62.99:0,63,547	0/1:3,8:11:1.99:208,0,2	1/1:2,5:7:15.03:153,15,0	1/1:0,5:5:15.04:166,15,0	0/0:1,0:1:3:0,3,26	0/0:10,0:10:29.96:0,30,253	0/0:6,0:6:15:0,15,130	1/1:2,8:10:21.06:232,21,0	0/0:8,0:8:23.97:0,24,202	0/1:6,10:15:65.06:257,0,65	0/0:16,0:16:29.94:0,30,256
chr10	67635885	.	A	AT	971.39	PASS	AB=1.000;AC=30;AF=0.536;AN=56;BaseQRankSum=7.608;DP=240;FS=8.970;HRun=4;HaplotypeScore=58.9870;InbreedingCoeff=0.6597;MQ=63.25;MQ0=0;MQRankSum=-6.380;QD=10.33;ReadPosRankSum=1.131;VQSLOD=0.3966;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,3:7:14.97:144,15,0	0/0:8,0:8:8.14:0,8,24	0/0:19,0:12:19.75:0,20,193	0/0:12,0:9:14.93:0,15,167	1/1:9,6:11:21.07:264,21,0	1/1:5,1:6:8.10:50,8,0	1/1:1,1:2:5.23:37,5,0	0/0:44,0:44:99:0,120,1404	1/1:6,0:6:3:28,3,0	1/1:12,0:12:11.48:120,11,0	1/1:6,2:7:3.36:126,3,0	1/1:3,0:3:7.75:44,8,0	0/0:2,0:2:3.01:0,3,36	1/1:3,0:3:4.87:17,5,0	0/1:2,0:2:3.03:3,0,11	1/1:3,2:4:8.32:56,8,0	0/0:12,0:12:12.94:0,13,49	0/0:8,0:8:6.11:0,6,18	1/1:3,1:3:7.56:62,8,0	0/1:1,0:1:0:0,0,0	1/1:1,0:1:3.01:41,3,0	0/0:2,0:2:3.01:0,3,36	0/0:8,0:8:21.06:0,21,249	0/0:5,0:5:9.03:0,9,108	1/1:7,1:7:12.89:80,13,0	0/0:1,0:1:3.01:0,3,36	1/1:5,2:6:10.55:87,11,0	0/0:25,0:25:60.18:0,60,716
chr10	67635887	.	T	TA	615.27	PASS	AB=0.919;AC=20;AF=0.357;AN=56;BaseQRankSum=7.578;DP=238;FS=9.630;HRun=0;HaplotypeScore=61.1980;InbreedingCoeff=0.3247;MQ=60.91;MQ0=0;MQRankSum=-6.488;QD=6.62;ReadPosRankSum=1.689;VQSLOD=2.3567;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:12,0:8:17.43:160,17,0	0/0:8,0:8:12.94:0,13,54	0/0:19,0:12:17.86:0,18,209	0/0:12,0:9:17.94:0,18,231	0/1:17,0:13:15.15:152,0,15	1/1:5,0:5:8.45:45,8,0	0/1:2,0:2:0.26:6,0,0	0/0:42,0:42:99:0,126,1715	1/1:5,1:6:2.46:45,2,0	0/1:11,1:12:17.69:108,0,18	0/1:8,0:7:28.91:35,0,29	0/1:2,1:3:0.77:53,0,1	0/0:2,0:2:3.01:0,3,42	1/1:3,0:3:5.81:32,6,0	0/0:2,0:2:5.61:0,6,46	0/1:5,0:4:0.70:18,0,1	0/0:12,0:12:15.49:0,15,80	0/0:8,0:8:7.49:0,7,26	0/1:3,1:3:3.29:50,0,3	0/0:1,0:1:0.47:0,0,1	1/1:1,0:1:2.84:14,3,0	0/0:2,0:2:5.98:0,6,62	0/0:8,0:8:24.04:0,24,313	0/0:5,0:5:9.03:0,9,126	1/1:8,0:7:4.19:46,4,0	0/0:1,0:1:3.01:0,3,42	0/1:6,1:6:8.59:13,0,9	0/0:23,0:23:63.17:0,63,854
chr10	67635888	.	TA	T	1339.64	PASS	AB=0.833;AC=36;AF=0.643;AN=56;BaseQRankSum=9.609;DP=234;FS=8.358;HRun=1;HaplotypeScore=54.9062;InbreedingCoeff=0.6515;MQ=60.96;MQ0=0;MQRankSum=-7.197;QD=11.45;ReadPosRankSum=4.116;VQSLOD=1.5993;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,0:8:14.89:63,15,0	1/1:8,0:8:14.09:71,14,0	0/0:20,0:12:15.39:0,15,241	0/0:12,0:9:18.05:0,18,240	1/1:14,0:10:20.66:168,21,0	1/1:5,0:5:8.86:72,9,0	1/1:1,1:2:5.91:57,6,0	0/0:41,0:41:99:0,123,1729	1/1:5,1:6:5.65:32,6,0	1/1:8,2:10:15.12:208,15,0	1/1:5,3:8:10.14:166,10,0	1/1:3,0:3:8.75:72,9,0	0/0:2,0:2:3.01:0,3,45	1/1:2,1:3:6.02:69,6,0	0/1:1,1:2:5.40:31,0,5	1/1:5,0:4:8.92:82,9,0	0/1:12,0:12:1.06:62,0,1	1/1:7,0:7:8.44:41,8,0	1/1:3,1:3:8.75:56,9,0	1/1:1,0:1:2.96:19,3,0	1/1:1,0:1:2.92:17,3,0	0/0:4,0:4:5.93:0,6,62	0/0:9,0:9:23.99:0,24,324	0/0:5,0:5:9.03:0,9,134	1/1:6,2:7:14.65:130,15,0	0/0:1,0:1:3.01:0,3,43	1/1:3,3:5:11.80:114,12,0	0/0:23,0:23:63.10:0,63,816
chr10	67635889	.	A	ATTATTT	2419.33	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=7.126;DP=235;FS=8.004;HRun=0;HaplotypeScore=71.4023;InbreedingCoeff=0.7611;MQ=60.86;MQ0=0;MQRankSum=-6.990;QD=26.59;ReadPosRankSum=1.920;VQSLOD=2.5436;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:12,0:8:15.45:153,15,0	0/0:8,0:8:15.01:0,15,187	0/0:20,0:12:23.85:0,24,385	0/0:12,0:9:20.55:0,21,361	1/1:14,0:10:18.61:259,19,0	1/1:4,1:5:9.03:206,9,0	1/1:1,1:2:5.97:114,6,0	0/0:41,0:41:99:0,111,2013	1/1:6,0:6:5.98:68,6,0	1/1:10,0:10:23.20:318,23,0	1/1:7,1:7:21.04:322,21,0	1/1:3,0:3:8.76:122,9,0	0/0:2,0:2:3.01:0,3,72	1/1:4,0:4:6.49:136,6,0	1/1:2,0:2:4.83:42,5,0	1/1:3,2:4:9.03:204,9,0	0/0:12,0:12:18.05:0,18,220	0/0:7,0:7:9.03:0,9,121	1/1:3,1:3:6.69:111,7,0	1/1:1,0:1:2.96:19,3,0	1/1:1,0:1:0.47:1,0,0	0/0:4,0:4:5.93:0,6,89	0/0:9,0:9:23.94:0,24,305	0/0:5,0:5:9.02:0,9,170	1/1:7,0:7:15.05:295,15,0	0/0:1,0:1:2.99:0,3,24	1/1:4,2:5:11.07:250,11,0	0/0:23,0:23:51:0,51,755
chr10	67635891	.	T	TA	216.04	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=5.910;DP=229;FS=0.781;HRun=0;HaplotypeScore=58.9686;InbreedingCoeff=0.2884;MQ=60.62;MQ0=0;MQRankSum=-4.228;QD=2.67;ReadPosRankSum=3.206;VQSLOD=2.3958;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,3:7:2.64:43,3,0	0/0:8,0:8:12:0,12,49	0/0:21,0:12:25.35:0,25,283	0/0:13,0:10:23.85:0,24,288	1/1:8,6:10:15.70:190,16,0	0/1:5,0:5:0.27:0,0,13	1/1:2,0:2:0.42:5,0,0	0/0:37,0:37:99:0,111,1479	1/1:6,0:6:2.04:9,2,0	0/1:9,0:9:1.91:2,0,94	0/1:8,0:7:25.80:47,0,26	0/1:3,0:3:2.12:2,0,17	0/0:2,0:2:3.01:0,3,42	0/0:4,0:4:8.24:0,8,41	0/0:2,0:2:5.69:0,6,47	0/1:5,0:4:2.76:12,0,3	0/0:12,0:12:14.11:0,14,76	0/0:7,0:7:6.66:0,7,21	0/1:4,0:3:8.48:8,0,12	0/0:1,0:1:2.97:0,3,20	1/1:1,0:1:0.47:1,0,0	0/0:5,0:5:11.95:0,12,123	0/0:9,0:9:27.04:0,27,333	0/0:6,0:6:9.03:0,9,126	0/1:8,0:7:8.78:9,0,21	0/0:2,0:2:3.01:0,3,32	1/1:5,0:4:8.32:31,8,0	0/0:19,0:19:51.12:0,51,659
chr10	67635893	.	TAG	T	1364.87	PASS	AB=1.000;AC=36;AF=0.667;AN=54;BaseQRankSum=8.661;DP=228;FS=3.211;HRun=0;HaplotypeScore=59.4677;InbreedingCoeff=0.6904;MQ=60.24;MQ0=1;MQRankSum=-5.546;QD=11.67;ReadPosRankSum=2.400;VQSLOD=3.2337;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,0:6:15.01:145,15,0	1/1:8,0:8:11.50:61,12,0	0/0:21,0:12:23.04:0,23,328	0/0:14,0:11:27:0,27,420	1/1:6,0:10:19.16:142,19,0	1/1:5,0:5:8.89:65,9,0	1/1:2,0:2:5.89:38,6,0	0/0:35,0:35:72.36:0,72,761	1/1:3,4:7:6:64,6,0	1/1:7,2:9:25.96:221,26,0	1/1:8,0:7:19.26:140,19,0	1/1:2,1:3:9.01:92,9,0	0/0:2,0:2:3:0,3,27	1/1:4,0:4:8.98:81,9,0	1/1:2,0:2:4.56:30,5,0	1/1:5,0:4:8.83:67,9,0	0/1:12,0:12:5.85:59,0,6	1/1:8,0:7:8.63:46,9,0	1/1:3,1:3:8.97:86,9,0	1/1:1,0:1:3.01:39,3,0	./.	0/0:7,0:7:11.74:0,12,93	0/0:9,0:9:14.34:0,14,145	0/0:6,0:6:7.36:0,7,57	1/1:5,3:7:14.87:121,15,0	0/1:2,0:2:0.01:0,0,0	1/1:5,0:4:4.26:50,4,0	0/0:16,0:16:24.05:0,24,244
chr10	67635995	.	A	ATT	1489.89	PASS	AB=1.000;AC=6;AF=0.107;AN=56;BaseQRankSum=-2.986;DP=447;FS=6.124;HRun=9;HaplotypeScore=58.7927;InbreedingCoeff=0.6904;MQ=62.43;MQ0=18;MQRankSum=1.216;QD=19.87;ReadPosRankSum=1.618;VQSLOD=2.0703;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,28:29:75.25:1146,75,0	0/0:6,0:6:15:0,15,148	0/1:12,0:11:4.25:4,0,221	0/0:8,0:6:18.02:0,18,176	1/1:9,11:19:30.10:462,30,0	0/0:18,0:17:45.09:0,45,471	0/0:9,0:9:24.02:0,24,243	0/0:35,0:35:84.13:0,84,873	0/0:13,0:12:21.04:0,21,224	0/0:13,0:13:27.06:0,27,287	0/0:13,0:13:30.04:0,30,303	0/0:13,0:12:33.07:0,33,343	0/0:7,0:7:15.02:0,15,160	0/0:14,0:14:33.05:0,33,344	0/0:17,0:17:42.09:0,42,439	0/0:12,0:12:24.04:0,24,255	0/0:44,0:40:87.21:0,87,925	0/0:20,0:16:36.09:0,36,383	0/0:14,0:14:36.09:0,36,383	0/0:17,0:17:36.05:0,36,380	0/0:13,0:11:27.06:0,27,287	0/0:14,0:14:27.03:0,27,276	0/0:18,0:17:36.02:0,36,362	0/0:24,0:21:57.14:0,57,607	0/0:8,0:8:15.04:0,15,160	0/1:10,0:9:3.24:3,0,171	0/0:13,0:12:32.98:0,33,351	0/0:9,0:9:20.97:0,21,193
chr10	67637153	.	G	GAAAAAAAA	10727.50	PASS	AB=0.865;AC=45;AF=0.804;AN=56;BaseQRankSum=2.789;DP=473;FS=4.015;HRun=15;HaplotypeScore=161.1219;InbreedingCoeff=0.3274;MQ=45.28;MQ0=23;MQRankSum=-6.423;QD=23.73;ReadPosRankSum=-4.167;VQSLOD=0.6793;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:20:18.01:445,18,0	1/1:2,2:3:9.03:344,9,0	0/1:9,0:8:0.09:1,0,0	0/0:4,0:2:2.99:0,3,24	1/1:33,0:30:42.12:1108,42,0	1/1:19,0:17:39.09:711,39,0	1/1:16,0:14:31.25:670,31,0	0/0:15,0:13:14.37:0,14,238	1/1:9,0:5:6.02:145,6,0	1/1:26,0:24:43.98:595,44,0	1/1:15,10:27:16.19:328,16,0	1/1:14,0:12:26.99:382,27,0	1/1:19,0:22:35.25:451,35,0	1/1:10,0:9:17.96:364,18,0	1/1:16,0:14:30.10:722,30,0	1/1:20,0:20:33.09:771,33,0	1/1:20,0:17:24.04:639,24,0	1/1:17,0:15:31.53:551,32,0	1/1:13,0:9:24.08:620,24,0	1/1:25,0:22:30.04:606,30,0	0/1:4,0:4:0:1,0,0	0/1:10,0:12:16.53:81,0,17	0/1:6,0:15:4.88:50,0,5	0/1:9,0:15:25.33:25,0,61	1/1:16,0:15:24.06:436,24,0	0/1:12,0:13:99:100,0,207	1/1:23,0:19:29.44:578,29,0	0/1:17,0:8:4.04:4,0,190
chr10	67637194	.	TAGAG	T	155.90	PASS	AB=1.000;AC=7;AF=0.146;AN=48;BaseQRankSum=1.746;DP=346;FS=7.947;HRun=0;HaplotypeScore=84.0977;InbreedingCoeff=0.4038;MQ=59.59;MQ0=8;MQRankSum=-0.949;QD=3.54;ReadPosRankSum=1.629;VQSLOD=0.8339;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:3:0,3,25	1/1:6,1:7:3.01:46,3,0	./.	0/0:33,0:17:0:0,0,1	0/0:17,0:16:15.05:0,15,277	./.	0/1:14,0:12:0:0,0,0	0/0:29,0:27:14.38:0,14,159	0/0:8,0:7:2.99:0,3,23	0/0:9,0:8:15.05:0,15,306	0/0:17,0:17:3.01:0,3,61	./.	0/0:7,0:7:2.99:0,3,23	0/0:6,0:6:3.01:0,3,37	0/0:10,0:9:3.01:0,3,58	0/0:12,0:12:3.01:0,3,48	1/1:9,5:13:9.01:117,9,0	1/1:5,1:8:9.01:102,9,0	0/0:22,0:20:18.06:0,18,352	0/0:14,0:13:3.01:0,3,58	./.	0/0:6,0:7:0.89:0,1,2	0/0:10,0:10:3.01:0,3,70	0/0:16,0:17:17.90:0,18,288	0/0:4,0:3:3.01:0,3,58	0/0:14,0:14:21.06:0,21,373	0/0:11,0:9:9.03:0,9,151	0/0:3,0:3:6.02:0,6,104
chr10	67637559	.	TCAAACAAAA	T	4255.24	PASS	AB=0.519;AC=5;AF=0.089;AN=56;BaseQRankSum=-1.467;DP=673;FS=1.749;HRun=0;HaplotypeScore=245.8371;InbreedingCoeff=0.6866;MQ=73.11;MQ0=1;MQRankSum=-3.343;QD=69.76;ReadPosRankSum=-1.643;VQSLOD=4.3171;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:90.29:0,90,3597	0/0:10,0:10:30.10:0,30,1401	0/0:34,0:27:63.04:0,63,2238	0/0:34,0:30:60.76:0,61,2281	0/0:27,0:26:69.24:0,69,2787	0/0:22,0:22:57.20:0,57,2666	0/0:21,0:21:63.22:0,63,2839	1/1:3,29:32:87.30:2152,87,0	0/0:17,0:17:48.15:0,48,2017	0/0:20,0:20:57.18:0,57,2217	0/0:34,0:34:90.29:0,90,3781	0/0:21,0:21:63.22:0,63,2858	0/0:16,0:16:42.13:0,42,1629	0/0:19,0:19:48.16:0,48,2136	0/0:31,0:31:84.27:0,84,3874	0/0:21,0:21:54.19:0,54,2522	0/0:39,0:39:99:0,114,4738	0/0:25,0:25:69.24:0,69,2885	0/0:7,0:7:21.07:0,21,987	0/0:25,0:25:72.25:0,72,3343	0/0:34,0:34:96.32:0,96,3996	0/0:18,0:18:42.14:0,42,1845	0/0:29,0:29:60.21:0,60,2682	0/0:41,0:41:99:0,105,4388	0/0:13,0:12:30.10:0,30,1378	0/1:2,26:28:40.32:2013,0,40	0/0:18,0:18:54.19:0,54,2489	1/1:0,1:1:3.01:91,3,0
chr10	67637583	.	T	TG	4845.33	PASS	AB=1.000;AC=31;AF=0.554;AN=56;BaseQRankSum=-2.280;DP=644;FS=4.309;HRun=4;HaplotypeScore=152.5812;InbreedingCoeff=-0.0988;MQ=76.60;MQ0=2;MQRankSum=1.556;QD=9.43;ReadPosRankSum=9.440;VQSLOD=0.8938;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:25:53.64:85,0,54	0/1:13,0:13:6.25:79,0,6	0/0:35,0:28:18.61:0,19,360	0/0:34,0:27:4.21:0,4,245	0/1:25,0:25:34.02:130,0,34	0/1:26,0:26:50.28:108,0,50	0/1:20,0:20:9.40:87,0,9	0/0:26,0:26:59.52:0,60,677	0/1:16,0:16:14.40:64,0,14	0/1:21,0:21:25.35:53,0,25	0/1:26,0:26:47.18:142,0,47	0/1:23,0:23:34.25:80,0,34	1/1:4,9:13:36.08:444,36,0	1/1:20,0:20:8.02:93,8,0	0/1:30,0:30:20.08:124,0,20	1/1:21,0:21:44.84:154,45,0	0/1:27,0:27:28:107,0,28	0/1:19,0:19:25.17:68,0,25	1/1:14,0:14:26.45:81,26,0	0/1:25,0:24:17.59:116,0,18	0/1:32,0:32:79.37:79,0,112	1/1:1,18:19:42.05:550,42,0	1/1:0,28:28:72.23:964,72,0	1/1:2,27:29:72.24:983,72,0	1/1:14,0:13:10.64:93,11,0	0/0:28,0:28:71.97:0,72,726	0/1:28,0:28:15.28:160,0,15	0/0:5,0:5:15.04:0,15,163
chr10	67637587	.	G	GA	11810.99	PASS	AB=0.845;AC=45;AF=0.804;AN=56;BaseQRankSum=-4.816;DP=632;FS=16.218;HRun=9;HaplotypeScore=124.4897;InbreedingCoeff=0.6296;MQ=74.89;MQ0=2;MQRankSum=-0.226;QD=21.91;ReadPosRankSum=6.106;VQSLOD=3.6451;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,17:24:44.91:477,45,0	1/1:4,9:13:4.95:294,5,0	0/0:30,1:26:11.88:0,12,159	0/1:30,0:23:33.86:34,0,171	1/1:3,20:24:33.81:565,34,0	1/1:5,20:25:40.12:671,40,0	1/1:2,19:21:31.10:571,31,0	0/0:27,1:28:26.72:0,27,444	1/1:3,12:15:33.09:365,33,0	1/1:5,17:22:34.29:599,34,0	1/1:3,22:25:57.15:629,57,0	1/1:3,19:23:56.99:612,57,0	0/1:14,0:14:12.86:111,0,13	1/1:3,16:20:44.85:459,45,0	1/1:5,24:29:56.04:804,56,0	1/1:0,21:21:63.17:697,63,0	1/1:7,22:29:49:732,49,0	1/1:3,15:18:42.11:465,42,0	1/1:3,13:16:45.09:485,45,0	1/1:1,23:23:57.06:603,57,0	0/1:7,23:30:24.57:553,0,25	1/1:18,0:18:18.43:173,18,0	1/1:28,0:28:66.61:387,67,0	1/1:27,0:27:69.30:374,69,0	1/1:3,11:13:36.06:382,36,0	0/0:28,0:28:56.93:0,57,487	1/1:5,23:28:49.27:770,49,0	0/0:5,0:5:15:0,15,130
chr10	67637644	.	TG	T	3015.30	PASS	AB=0.967;AC=34;AF=0.607;AN=56;BaseQRankSum=7.508;DP=551;FS=1.177;HRun=2;HaplotypeScore=126.5082;InbreedingCoeff=0.8619;MQ=76.67;MQ0=0;MQRankSum=-0.404;QD=8.59;ReadPosRankSum=-0.857;VQSLOD=0.8391;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:24,1:25:27.57:186,28,0	0/0:14,0:14:31.14:0,31,345	0/1:21,0:21:11.36:11,0,370	0/1:13,1:12:3.34:3,0,116	1/1:24,0:25:35.90:232,36,0	1/1:19,0:19:46.62:257,47,0	1/1:21,0:21:42.32:201,42,0	0/0:30,0:29:42.07:0,42,269	1/1:12,0:12:17.82:119,18,0	1/1:26,0:26:49.91:341,50,0	1/1:14,0:14:16.90:95,17,0	1/1:17,0:17:17.99:109,18,0	0/0:12,0:12:36.06:0,36,373	1/1:20,0:20:25.43:168,25,0	1/1:22,0:22:27.48:202,27,0	1/1:13,1:14:16.82:142,17,0	0/0:24,0:24:63.54:0,64,654	0/0:11,0:11:33.07:0,33,344	1/1:19,0:19:43.35:266,43,0	1/1:12,0:11:25.49:170,25,0	1/1:25,0:25:55.30:343,55,0	0/0:22,0:22:61.61:0,62,599	0/0:25,0:25:50.75:0,51,599	0/0:27,0:27:75.02:0,75,773	1/1:19,1:19:28.10:173,28,0	0/0:26,0:26:15.06:0,15,172	1/1:25,0:25:37.86:218,38,0	0/0:9,0:9:8.55:0,9,47
chr10	67637645	.	G	GA	3076.35	PASS	AB=0.829;AC=28;AF=0.500;AN=56;BaseQRankSum=1.346;DP=557;FS=8.381;HRun=0;HaplotypeScore=133.6884;InbreedingCoeff=0.6745;MQ=76.45;MQ0=0;MQRankSum=0.283;QD=9.58;ReadPosRankSum=0.259;VQSLOD=3.2723;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:26:16.96:107,17,0	0/0:13,0:13:38.97:0,39,388	0/0:22,0:22:46.16:0,46,535	0/0:14,0:12:19.37:0,19,167	1/1:19,1:25:3.90:92,4,0	1/1:8,9:18:31.59:318,32,0	1/1:9,12:22:46.86:416,47,0	0/0:28,0:27:72.23:0,72,968	1/1:3,7:12:5.30:162,5,0	1/1:15,11:28:36.70:316,37,0	1/1:6,8:14:6.21:133,6,0	0/1:15,0:16:0.23:107,0,0	0/0:12,0:12:35.78:0,36,338	1/1:13,3:20:3.56:142,4,0	0/1:12,7:22:18.61:181,0,19	0/1:10,2:15:11.10:83,0,11	0/0:24,0:24:65.26:0,65,608	0/0:11,0:11:32.92:0,33,282	1/1:6,11:19:21.19:294,21,0	0/1:7,5:12:0.87:121,0,1	1/1:10,13:25:23.95:317,24,0	0/0:22,0:22:48.07:0,48,569	0/0:24,1:25:34.95:0,35,555	0/0:30,0:30:72.88:0,73,677	1/1:11,10:20:0.44:251,0,0	0/0:26,0:26:72.06:0,72,939	1/1:15,7:25:14.08:239,14,0	0/0:9,0:9:24.08:0,24,319
chr10	67637646	.	G	GA	6462.64	PASS	AB=0.823;AC=46;AF=0.821;AN=56;BaseQRankSum=-2.059;DP=577;FS=2.157;HRun=12;HaplotypeScore=133.6559;InbreedingCoeff=0.6063;MQ=75.31;MQ0=0;MQRankSum=-1.018;QD=12.93;ReadPosRankSum=-2.025;VQSLOD=3.4034;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:28:30.48:194,30,0	1/1:5,6:13:16.32:210,16,0	0/1:21,0:22:8.85:9,0,32	0/0:13,0:12:7.54:0,8,36	1/1:28,0:28:30.25:166,30,0	1/1:18,0:18:36.04:342,36,0	1/1:22,0:22:50.92:460,51,0	0/0:9,0:26:35.62:0,36,116	1/1:13,0:13:11.29:180,11,0	1/1:29,0:29:51.27:438,51,0	1/1:15,0:15:15.15:198,15,0	1/1:19,0:19:18.40:234,18,0	1/1:9,5:14:12.07:219,12,0	1/1:21,0:21:14.14:186,14,0	1/1:24,0:24:4.58:256,5,0	1/1:16,0:16:5.17:147,5,0	1/1:7,16:24:0.42:359,0,0	1/1:4,6:11:29.86:268,30,0	1/1:21,0:21:33.04:364,33,0	1/1:13,0:12:5.34:133,5,0	1/1:26,0:26:29.23:340,29,0	1/1:15,8:23:20.07:341,20,0	1/1:15,6:22:41.99:384,42,0	0/1:17,14:31:25.45:401,0,25	1/1:22,0:21:13.62:320,14,0	0/0:10,0:27:39.74:0,40,129	1/1:25,0:25:27.67:315,28,0	0/0:2,0:9:12.21:0,12,35
chr10	67638767	.	G	GA	1955.59	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-9.013;DP=658;FS=4.101;HRun=5;HaplotypeScore=64.1908;InbreedingCoeff=0.9994;MQ=84.78;MQ0=0;MQRankSum=-4.828;QD=34.31;ReadPosRankSum=0.259;VQSLOD=3.9960;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,38:39:99:1406,108,0	0/0:11,0:11:30.07:0,30,322	0/0:22,0:22:56.49:0,56,544	0/0:23,0:23:54.13:0,54,575	1/1:2,16:18:51.17:671,51,0	0/0:26,0:26:69.17:0,69,742	0/0:17,0:17:36.07:0,36,378	0/0:28,0:28:78.19:0,78,832	0/0:31,0:31:87.19:0,87,924	0/0:26,0:25:69.16:0,69,731	0/0:16,0:16:48.12:0,48,516	0/0:28,0:28:78.20:0,78,838	0/0:24,0:24:66.15:0,66,701	0/0:19,0:19:57.13:0,57,604	0/0:16,0:16:42.11:0,42,451	0/0:23,0:23:63.16:0,63,677	0/0:32,0:32:90.20:0,90,951	0/0:18,0:18:48.09:0,48,506	0/0:24,0:24:66.16:0,66,709	0/0:23,0:23:63.16:0,63,677	0/0:36,0:36:90.22:0,90,967	0/0:19,0:19:51.05:0,51,519	0/0:28,0:28:75.19:0,75,806	0/0:17,0:17:48.12:0,48,516	0/0:25,0:25:60.12:0,60,635	0/0:35,0:35:99:0,99,1058	0/0:21,0:21:60.15:0,60,645	0/0:13,0:13:30.07:0,30,322
chr10	67638857	.	CCTT	C	1525.74	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=4.426;DP=591;FS=4.052;HRun=0;HaplotypeScore=94.7380;InbreedingCoeff=0.9915;MQ=87.90;MQ0=0;MQRankSum=-3.789;QD=33.17;ReadPosRankSum=1.098;VQSLOD=4.1367;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:8,27:35:87.29:1363,87,0	0/0:11,0:11:33.07:0,33,679	0/0:20,0:20:42.18:0,42,949	0/0:22,0:22:47.80:0,48,933	1/1:1,10:11:18.06:283,18,0	0/0:20,0:20:57.15:0,57,1195	0/0:24,0:24:66.23:0,66,1415	0/0:27,0:27:72.23:0,72,1396	0/0:21,0:21:54.19:0,54,1192	0/0:21,0:21:63.22:0,63,1368	0/0:15,0:15:42.06:0,42,833	0/0:24,0:24:63.22:0,63,1391	0/0:19,0:19:54.19:0,54,1134	0/0:21,0:21:63.18:0,63,1306	0/0:23,0:23:66.23:0,66,1440	0/0:20,0:20:60.21:0,60,1304	0/0:34,0:34:99:0,99,2161	0/0:21,0:21:60.21:0,60,1304	0/0:17,0:17:45.15:0,45,993	0/0:13,0:13:36.12:0,36,773	0/0:20,0:20:54.17:0,54,1124	0/0:28,0:28:81.23:0,81,1742	0/0:21,0:21:57.17:0,57,1157	0/0:21,0:21:57.20:0,57,1204	0/0:19,0:19:51.13:0,51,1058	0/0:38,0:38:99:0,105,2239	0/0:19,0:19:54.19:0,54,1152	0/0:6,0:6:18.06:0,18,397
chr10	67639175	.	G	GGA	3830.47	PASS	AB=0.684;AC=41;AF=0.759;AN=54;BaseQRankSum=1.182;DP=689;FS=0.589;HRun=0;HaplotypeScore=193.0255;InbreedingCoeff=0.5528;MQ=54.20;MQ0=12;MQRankSum=-3.548;QD=8.24;ReadPosRankSum=1.417;VQSLOD=3.2154;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:16:10.88:59,11,0	1/1:3,0:9:2.70:26,3,0	0/0:38,0:15:3.01:0,3,34	0/0:64,0:30:10.76:0,11,122	1/1:25,0:25:30.11:178,30,0	1/1:41,0:39:14.33:100,14,0	1/1:20,0:20:2.78:16,3,0	0/0:32,0:32:45.81:0,46,476	1/1:25,0:25:0.39:44,0,0	1/1:29,0:28:37.08:234,37,0	1/1:23,0:23:2.13:10,2,0	1/1:22,0:21:8.74:63,9,0	1/1:7,19:26:18.86:767,19,0	1/1:19,0:19:4.57:34,5,0	1/1:32,0:32:5.82:49,6,0	1/1:21,0:21:13.09:92,13,0	1/1:14,0:14:2.69:7,3,0	1/1:6,0:12:9:79,9,0	1/1:17,0:17:13.36:83,13,0	1/1:17,0:17:5.83:40,6,0	0/0:11,0:9:0.47:0,0,1	0/1:14,11:26:34.56:437,0,35	1/1:5,16:21:48.16:757,48,0	1/1:3,16:19:6.83:580,7,0	./.	0/0:36,0:37:27.23:0,27,558	1/1:30,0:29:27.63:174,28,0	0/0:14,0:14:33.06:0,33,367
chr10	67639191	.	A	AAT	5358.32	PASS	AB=0.939;AC=18;AF=0.321;AN=56;BaseQRankSum=14.435;DP=724;FS=38.349;HRun=0;HaplotypeScore=176.2909;InbreedingCoeff=-0.2571;MQ=58.97;MQ0=12;MQRankSum=-12.826;QD=12.21;ReadPosRankSum=-7.712;VQSLOD=1.6174;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:16,0:16:18.23:18,0,102	0/0:14,0:14:26.63:0,27,350	0/0:37,0:20:41.21:0,41,620	0/0:57,0:25:46.25:0,46,732	0/1:28,0:28:41.90:42,0,138	0/1:34,10:41:99:654,0,108	0/1:15,5:20:21.52:220,0,22	0/0:34,0:33:96.29:0,96,1485	0/1:27,0:27:53.08:405,0,53	0/1:33,0:30:99:644,0,268	1/1:25,0:25:34.39:425,34,0	0/1:23,4:27:92.86:202,0,93	0/1:27,0:26:0.73:1,0,234	0/1:13,4:17:67.07:127,0,67	0/1:34,0:34:71.61:638,0,72	0/1:22,0:22:93.10:320,0,93	0/0:10,0:10:15.05:0,15,199	0/0:8,0:8:17.50:0,18,144	0/1:20,0:20:99:253,0,169	0/1:20,0:20:60.23:345,0,60	0/1:13,0:11:20.13:195,0,20	0/0:24,0:24:45.11:0,45,539	0/0:25,0:25:44.02:0,44,406	0/0:21,0:21:23.43:0,23,210	0/1:29,0:28:4.31:430,0,4	0/0:37,0:37:77.87:0,78,1639	0/1:24,10:35:99:439,0,123	0/0:18,0:18:51.17:0,51,810
chr10	67639193	.	A	AAT	3921.22	PASS	AB=0.793;AC=17;AF=0.304;AN=56;BaseQRankSum=15.357;DP=727;FS=46.385;HRun=0;HaplotypeScore=185.4890;InbreedingCoeff=-0.2641;MQ=61.10;MQ0=11;MQRankSum=-12.621;QD=9.36;ReadPosRankSum=-5.736;VQSLOD=1.0516;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:16,0:16:91.23:102,0,91	0/0:13,0:13:23.65:0,24,311	0/0:33,0:20:23.46:0,23,479	0/0:51,0:25:20.23:0,20,653	0/1:27,0:27:78.13:244,0,78	0/1:26,19:42:71.47:278,0,71	0/1:17,7:24:46.85:71,0,47	0/0:33,0:32:96.28:0,96,1446	0/1:15,10:26:34.20:282,0,34	0/1:23,12:32:99:763,0,255	1/1:17,9:26:27.66:252,28,0	0/1:24,4:27:58.58:104,0,59	0/0:27,0:26:9.08:0,9,286	0/1:12,4:16:30.40:88,0,30	0/1:26,10:36:69.92:315,0,70	0/1:13,10:23:56.44:212,0,56	0/0:11,0:11:20.51:0,21,228	0/0:9,0:9:20.50:0,20,190	0/1:16,6:22:99:260,0,167	0/1:12,7:19:39.25:203,0,39	0/1:9,4:11:18.47:79,0,18	0/0:25,0:25:45.72:0,46,530	0/0:26,0:26:46.65:0,47,432	0/0:22,0:22:26.05:0,26,233	0/1:21,8:28:11.97:225,0,12	0/0:39,1:40:60.75:0,61,1573	0/1:23,11:33:76.46:445,0,76	0/0:18,0:18:54.18:0,54,846
chr10	67639197	.	A	AAT	8718.09	PASS	AB=0.815;AC=31;AF=0.554;AN=56;BaseQRankSum=11.116;DP=609;FS=0.741;HRun=0;HaplotypeScore=148.3767;InbreedingCoeff=0.7710;MQ=67.16;MQ0=7;MQRankSum=-12.607;QD=23.89;ReadPosRankSum=-5.520;VQSLOD=4.0800;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:6,0:12:9.07:122,0,9	0/0:10,0:10:20.74:0,21,272	0/0:28,0:19:35.69:0,36,538	0/0:36,0:23:29.97:0,30,574	1/1:9,1:30:5.33:442,5,0	1/1:20,18:36:56.39:929,56,0	1/1:13,7:20:39.06:520,39,0	0/0:34,0:33:65.28:0,65,1167	1/1:7,11:18:28.52:609,29,0	1/1:16,12:26:49.26:982,49,0	1/1:12,9:21:48.06:622,48,0	1/1:11,4:15:7.57:257,8,0	0/1:28,0:27:6.97:7,0,334	1/1:10,4:14:20.05:293,20,0	1/1:16,10:26:54.64:914,55,0	1/1:6,10:16:20.41:439,20,0	0/0:10,0:10:26.67:0,27,293	0/0:8,0:8:17.61:0,18,170	0/1:15,6:21:55.37:533,0,55	1/1:9,7:16:18.75:427,19,0	1/1:10,4:13:23.08:285,23,0	0/0:21,0:21:30.91:0,31,424	0/0:25,0:25:26.44:0,26,364	0/0:19,0:19:19.89:0,20,199	1/1:12,8:19:51.16:708,51,0	0/0:34,1:35:56.47:0,56,1374	1/1:16,11:26:41.83:630,42,0	0/0:17,0:17:51.16:0,51,728
chr10	67639198	.	A	ATA	8992.88	PASS	AB=1.000;AC=32;AF=0.571;AN=56;BaseQRankSum=11.209;DP=606;FS=0.741;HRun=0;HaplotypeScore=160.9239;InbreedingCoeff=0.8483;MQ=68.15;MQ0=7;MQRankSum=-12.394;QD=24.84;ReadPosRankSum=-3.597;VQSLOD=4.4453;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:11,0:11:9.67:122,0,10	0/0:11,0:11:20.74:0,21,272	0/0:28,0:19:35.69:0,36,538	0/0:34,0:24:29.97:0,30,574	1/1:28,0:28:8.34:487,8,0	1/1:36,0:35:56.40:929,56,0	1/1:19,0:19:39.06:521,39,0	0/0:33,0:32:65.28:0,65,1167	1/1:18,0:18:31.43:624,31,0	1/1:20,9:27:65.61:1001,66,0	1/1:21,0:21:47.68:621,48,0	1/1:15,0:15:7.57:257,8,0	0/1:29,0:28:6.97:7,0,334	1/1:14,0:14:22.83:305,23,0	1/1:26,0:26:54.64:914,55,0	1/1:15,0:15:20.45:439,20,0	0/0:10,0:10:26.96:0,27,301	0/0:8,0:8:17.61:0,18,170	1/1:21,0:21:42.80:718,43,0	1/1:16,0:16:18.75:427,19,0	1/1:14,0:13:23.08:285,23,0	0/0:22,0:22:30.91:0,31,424	0/0:25,0:25:26.44:0,26,364	0/0:19,0:19:19.89:0,20,199	1/1:21,0:20:51.16:708,51,0	0/0:36,0:36:56.47:0,56,1374	1/1:27,0:26:41.83:630,42,0	0/0:17,0:17:51.16:0,51,728
chr10	67640601	.	CT	C	13410.19	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=13.513;DP=728;FS=13.186;HRun=2;HaplotypeScore=121.7685;InbreedingCoeff=1.0000;MQ=87.91;MQ0=0;MQRankSum=-2.858;QD=36.34;ReadPosRankSum=3.462;VQSLOD=3.1927;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,102,1525	0/0:14,0:14:36.12:0,36,535	0/0:26,0:24:69.16:0,69,949	0/0:33,0:33:92.12:0,92,1287	0/0:19,0:19:57.16:0,57,792	1/1:0,24:24:63.20:818,63,0	1/1:2,21:23:51.17:662,51,0	0/0:30,0:30:84.26:0,84,1211	1/1:0,28:28:84.27:1091,84,0	1/1:1,28:29:84.26:1073,84,0	1/1:0,27:27:78.25:1008,78,0	1/1:0,33:33:99:1281,99,0	0/0:28,0:28:84.23:0,84,1214	1/1:0,29:29:81.26:1052,81,0	1/1:1,33:34:93.30:1207,93,0	1/1:0,28:28:84.27:1090,84,0	0/0:42,0:42:99:0,126,1834	0/0:22,0:22:66.22:0,66,988	1/1:2,27:29:84.21:1032,84,0	1/1:0,18:18:54.13:681,54,0	1/1:2,31:33:87.28:1129,87,0	0/0:17,0:17:48.14:0,48,677	0/0:18,0:18:48.16:0,48,712	0/0:40,0:40:99:0,117,1748	1/1:0,12:12:36.12:467,36,0	0/0:18,0:18:54.18:0,54,809	1/1:0,22:22:63.20:818,63,0	0/0:18,0:17:54.16:0,54,786
chr10	67641324	.	A	AT	710.60	PASS	AB=0.882;AC=5;AF=0.089;AN=56;BaseQRankSum=-0.638;DP=365;FS=0.000;HRun=10;HaplotypeScore=41.7344;InbreedingCoeff=0.6974;MQ=74.13;MQ0=0;MQRankSum=-0.787;QD=15.45;ReadPosRankSum=0.892;VQSLOD=3.3845;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,14:15:33.08:352,33,0	0/0:8,0:8:23.97:0,24,197	0/0:12,0:12:2.49:0,2,109	0/0:6,0:6:11.95:0,12,94	1/1:1,15:16:45.05:466,45,0	0/0:14,0:14:41.95:0,42,345	0/0:8,0:8:23.97:0,24,197	0/0:25,0:26:67.79:0,68,534	0/0:14,0:14:38.92:0,39,317	0/0:9,0:9:26.97:0,27,222	0/1:13,2:15:22.02:22,0,254	0/0:7,0:7:17.98:0,18,148	0/0:6,0:6:17.98:0,18,148	0/0:10,0:10:29.96:0,30,244	0/0:12,0:12:32.95:0,33,271	0/0:22,0:21:65.92:0,66,542	0/0:9,0:10:26:0,26,203	0/0:18,1:19:21.94:0,22,383	0/0:16,0:16:35.86:0,36,280	0/0:15,0:15:44.95:0,45,369	0/0:11,0:11:32.94:0,33,267	0/0:10,0:10:26.96:0,27,222	0/0:15,0:15:37.85:0,38,302	0/0:5,0:5:14.98:0,15,123	0/0:17,0:17:47.93:0,48,392	0/0:15,0:15:38.95:0,39,320	0/0:17,0:18:52.98:0,53,424	0/0:14,0:14:35.91:0,36,292
chr10	67642004	.	CCA	C	1193.19	PASS	AB=0.845;AC=26;AF=0.500;AN=52;BaseQRankSum=4.151;DP=595;FS=0.717;HRun=0;HaplotypeScore=75.9178;InbreedingCoeff=0.1493;MQ=66.02;MQ0=12;MQRankSum=2.621;QD=3.15;ReadPosRankSum=2.059;VQSLOD=1.0927;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:34:8.97:0,9,71	0/0:11,0:11:3:0,3,26	0/0:32,0:16:0:0,0,0	./.	0/0:16,0:16:2.99:0,3,24	0/1:12,4:16:29.29:114,0,29	1/1:25,11:37:17.88:176,18,0	0/0:25,0:25:24.75:0,25,166	1/1:14,1:19:11.53:74,12,0	1/1:19,0:18:1.15:13,1,0	./.	0/1:19,11:31:27:125,0,27	0/1:22,1:23:26.30:26,0,36	1/1:16,2:19:20.86:192,21,0	0/1:13,8:22:22.77:155,0,23	1/1:12,4:16:12.03:127,12,0	0/0:14,0:16:12:0,12,120	0/1:15,1:22:1.86:2,0,235	1/1:6,3:9:5.99:54,6,0	1/1:12,2:14:3.01:32,3,0	1/1:32,9:39:2.97:32,3,0	0/1:13,1:14:26.30:26,0,38	0/0:12,0:13:0.91:0,1,163	0/1:42,1:45:12.44:12,0,476	0/1:11,7:16:29.60:114,0,30	0/0:27,0:25:34.37:0,34,257	1/1:11,2:12:8.86:78,9,0	0/0:8,0:7:3.01:0,3,36
chr10	67643199	.	A	AGT	16522.39	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-16.926;DP=682;FS=0.618;HRun=0;HaplotypeScore=75.4681;InbreedingCoeff=0.9987;MQ=84.30;MQ0=4;MQRankSum=-4.575;QD=47.34;ReadPosRankSum=2.098;VQSLOD=6.2741;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,147,2079	0/0:7,0:7:18.05:0,18,246	0/0:26,0:26:60.15:0,60,839	0/0:18,0:17:37.67:0,38,516	0/0:30,0:30:72.24:0,72,1048	1/1:0,20:20:54.19:1011,54,0	1/1:1,23:25:63.22:1180,63,0	0/0:28,0:28:81.26:0,81,1160	1/1:0,29:28:81.11:1516,81,0	1/1:5,22:27:69.18:1186,69,0	1/1:1,18:18:48.16:884,48,0	1/1:2,24:26:69.24:1286,69,0	0/0:26,0:26:75.24:0,75,1084	1/1:2,16:19:45.15:843,45,0	1/1:0,29:29:78.27:1458,78,0	1/1:2,19:21:51.17:952,51,0	0/0:34,0:34:99:0,99,1418	0/0:20,0:20:57.19:0,57,839	1/1:4,26:32:87.23:1531,87,0	1/1:1,19:20:51.17:950,51,0	1/1:2,24:26:69.24:1292,69,0	0/0:20,0:20:60.20:0,60,883	0/0:21,0:21:57.19:0,57,839	0/0:25,0:25:75.25:0,75,1103	1/1:2,18:21:54.18:989,54,0	0/0:19,0:19:54.18:0,54,779	1/1:1,30:33:78.27:1447,78,0	0/0:9,0:9:27.09:0,27,393
chr10	67643554	.	TGTG	T	1017.33	PASS	AB=0.934;AC=23;AF=0.426;AN=54;BaseQRankSum=9.134;DP=505;FS=3.762;HRun=0;HaplotypeScore=211.5809;InbreedingCoeff=0.2135;MQ=38.62;MQ0=11;MQRankSum=0.335;QD=3.36;ReadPosRankSum=5.643;VQSLOD=2.4076;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:13:1.55:0,2,4	0/0:11,0:11:14.20:0,14,119	0/0:19,0:7:21.07:0,21,481	0/0:35,0:11:33.10:0,33,604	0/1:15,0:13:0:0,0,0	0/1:18,0:18:0.12:76,0,0	1/1:22,1:22:12.01:55,12,0	0/0:26,0:25:68.59:0,69,1391	1/1:22,1:23:13.81:157,14,0	0/1:21,0:20:75.38:176,0,75	./.	0/1:12,1:13:5.82:46,0,6	0/1:13,0:13:12.59:13,0,140	1/1:20,0:20:11.44:76,11,0	1/1:15,1:16:19.02:103,19,0	0/1:20,6:26:8.96:217,0,9	0/0:18,0:18:23.73:0,24,335	0/0:16,0:16:24.81:0,25,419	0/1:8,0:15:37.45:37,0,144	0/1:11,1:11:5.51:47,0,6	0/1:13,0:12:3.95:4,0,12	1/1:21,0:20:5.37:18,5,0	0/1:15,0:14:14.60:15,0,122	0/0:16,0:16:0.34:0,0,129	1/1:14,1:13:5.85:20,6,0	0/0:32,0:31:46.03:0,46,1539	0/1:21,1:20:26.11:125,0,26	0/0:4,0:4:7.20:0,7,204
chr10	67643556	.	TGC	T	2968.12	PASS	AB=0.951;AC=35;AF=0.648;AN=54;BaseQRankSum=7.323;DP=498;FS=8.581;HRun=0;HaplotypeScore=198.7518;InbreedingCoeff=0.4161;MQ=38.74;MQ0=12;MQRankSum=-0.728;QD=8.02;ReadPosRankSum=4.031;VQSLOD=2.3857;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:10,3:12:2.92:18,3,0	0/1:10,0:10:1.79:2,0,42	0/0:20,0:8:21.73:0,22,293	0/0:32,0:10:29.46:0,29,343	./.	1/1:9,3:18:30.52:217,31,0	1/1:14,3:22:11.40:106,11,0	0/0:24,0:23:17.92:0,18,735	1/1:14,2:23:31.35:317,31,0	1/1:10,7:20:52.97:463,53,0	0/1:6,3:10:0:0,0,0	1/1:5,5:13:16.16:125,16,0	0/1:12,0:12:25.25:25,0,58	1/1:0,13:20:11.95:118,12,0	1/1:9,2:16:23.70:198,24,0	1/1:17,9:26:68.96:678,69,0	0/0:18,0:18:19.23:0,19,106	0/0:17,0:17:1.63:0,2,144	1/1:12,2:14:31.53:258,32,0	1/1:7,1:11:9.91:95,10,0	1/1:12,0:12:5.11:29,5,0	0/1:22,0:21:13.86:44,0,14	0/1:15,0:14:41.20:41,0,69	0/1:16,0:16:15.03:15,0,78	1/1:12,2:13:10.95:63,11,0	0/1:31,2:32:40.85:41,0,843	1/1:11,4:21:36.76:294,37,0	0/0:4,0:4:9.03:0,9,127
chr10	67643562	.	TGTGTGTGTGTGCGTGTGCGTGC	T	9414.23	PASS	AB=0.896;AC=22;AF=0.407;AN=54;BaseQRankSum=9.232;DP=529;FS=15.918;HRun=0;HaplotypeScore=303.0547;InbreedingCoeff=0.3952;MQ=40.82;MQ0=13;MQRankSum=-7.382;QD=35.00;ReadPosRankSum=9.073;VQSLOD=1.7624;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:16:2.94:0,3,138	0/0:12,0:12:20.58:0,21,393	0/0:30,0:13:39.13:0,39,2735	0/0:39,0:14:42.14:0,42,2585	0/0:14,0:12:2.92:0,3,50	0/1:14,3:17:9.53:743,0,10	1/1:18,2:20:1.37:168,1,0	0/0:27,0:26:74.98:0,75,3734	1/1:21,2:23:1.26:777,1,0	1/1:14,5:18:13.87:1564,14,0	./.	0/1:9,5:13:2.17:448,0,2	0/0:14,0:14:22.89:0,23,1281	1/1:12,8:20:11.64:605,12,0	1/1:14,2:16:15:617,15,0	1/1:23,3:26:42.44:1963,42,0	0/0:22,0:22:35.84:0,36,1802	0/0:19,0:19:34.38:0,34,1517	1/1:13,2:14:1.63:521,2,0	1/1:12,1:12:15.05:576,15,0	0/1:12,0:10:9.78:12,0,10	0/0:23,0:22:9.01:0,9,504	0/0:14,0:13:12.82:0,13,726	0/1:18,0:18:21.45:21,0,881	0/0:13,1:12:5.81:0,6,32	0/1:32,2:33:99:256,0,5255	0/1:18,4:20:34.36:1142,0,34	0/0:4,0:4:12.04:0,12,1009
chr10	67643566	.	TGTGTGTGCGTGTGCGTGC	T	8852.13	PASS	AB=0.979;AC=28;AF=0.519;AN=54;BaseQRankSum=10.723;DP=540;FS=0.000;HRun=0;HaplotypeScore=278.9685;InbreedingCoeff=0.6684;MQ=41.68;MQ0=12;MQRankSum=-6.035;QD=29.61;ReadPosRankSum=8.134;VQSLOD=2.2555;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:15:2.94:0,3,93	0/0:13,0:13:23.66:0,24,467	0/0:32,0:16:48.16:0,48,2762	0/0:39,0:17:51.16:0,51,2619	0/0:13,0:12:2.81:0,3,16	1/1:14,2:16:13.66:795,14,0	1/1:18,1:19:2.25:138,2,0	0/0:30,0:29:78.22:0,78,3489	1/1:20,2:22:19.59:909,20,0	1/1:17,1:17:36.27:1377,36,0	./.	1/1:13,1:13:13.60:506,14,0	0/0:14,0:14:19.53:0,20,1056	1/1:17,2:19:11.65:574,12,0	1/1:13,1:14:15.05:631,15,0	1/1:20,6:26:48.07:1557,48,0	0/0:23,0:23:37.79:0,38,1535	0/0:20,0:20:31.04:0,31,1385	1/1:12,1:13:14.82:465,15,0	1/1:16,2:17:15.05:575,15,0	1/1:20,0:18:2.99:31,3,0	0/0:23,0:22:3.97:0,4,422	0/1:14,0:13:0.55:1,0,677	0/1:16,0:16:1.56:2,0,748	0/1:10,1:10:0:0,0,0	0/1:37,0:36:99:191,0,4889	1/1:20,2:20:15.66:1100,16,0	0/0:4,0:4:12.04:0,12,847
chr10	67643568	.	TGTGTGCGTGTGCGTGC	T	7841.14	PASS	AB=1.000;AC=31;AF=0.574;AN=54;BaseQRankSum=10.926;DP=538;FS=0.000;HRun=0;HaplotypeScore=267.8406;InbreedingCoeff=0.5877;MQ=43.25;MQ0=13;MQRankSum=-7.556;QD=23.76;ReadPosRankSum=7.369;VQSLOD=2.7482;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:15:2.94:0,3,69	0/0:13,0:13:19.29:0,19,379	0/0:34,0:16:48.16:0,48,2435	0/0:41,0:18:54.16:0,54,2335	1/1:14,0:12:0.47:1,0,0	1/1:13,3:16:24.41:709,24,0	1/1:18,0:18:2.18:124,2,0	0/0:31,0:30:81.14:0,81,2982	1/1:18,3:21:10.37:775,10,0	1/1:16,1:16:39.53:1326,40,0	./.	1/1:11,3:13:7.35:410,7,0	0/0:15,0:15:7.36:0,7,816	1/1:16,3:19:11.99:503,12,0	1/1:9,4:13:15.05:523,15,0	1/1:25,0:25:48.09:1459,48,0	0/0:23,0:23:38.08:0,38,1283	0/0:20,0:20:20.71:0,21,1049	1/1:13,0:13:14.43:407,14,0	1/1:15,3:17:15.02:478,15,0	1/1:20,0:18:2.04:6,2,0	0/1:22,0:21:10.19:10,0,350	0/1:14,0:13:0.59:1,0,534	0/1:16,0:16:3.98:4,0,630	0/1:11,0:10:0:0,0,0	0/1:37,0:36:99:161,0,4282	1/1:19,3:20:14.03:945,14,0	0/0:4,0:4:12.04:0,12,770
chr10	67643572	.	TGCGTGTGCGTGC	T	6319.44	PASS	AB=1.000;AC=31;AF=0.574;AN=54;BaseQRankSum=11.390;DP=524;FS=0.478;HRun=0;HaplotypeScore=240.2678;InbreedingCoeff=0.5923;MQ=45.96;MQ0=11;MQRankSum=-7.577;QD=20.39;ReadPosRankSum=5.170;VQSLOD=3.6178;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:2.98:0,3,22	0/0:13,0:13:18.86:0,19,363	0/0:40,0:22:56.23:0,56,2282	0/0:45,0:22:48.40:0,48,2180	1/1:10,0:12:6.02:106,6,0	1/1:14,0:14:25.50:557,25,0	1/1:15,0:15:3.01:97,3,0	0/0:31,0:30:81.61:0,82,2708	1/1:18,0:18:23.89:632,24,0	1/1:16,1:16:41.89:1095,42,0	./.	1/1:14,0:13:12.04:342,12,0	0/0:15,0:15:6.70:0,7,724	1/1:18,0:18:11.79:397,12,0	1/1:12,0:12:15.05:427,15,0	1/1:20,0:20:48.01:1114,48,0	0/0:23,0:23:17.18:0,17,1093	0/1:19,0:20:5.89:6,0,897	1/1:11,0:11:13.07:316,13,0	1/1:9,8:16:14.97:368,15,0	1/1:6,14:19:2.79:13,3,0	0/1:22,0:21:6.95:7,0,341	0/1:14,0:13:0.59:1,0,450	0/0:16,0:16:5.04:0,5,651	0/1:10,0:10:0:0,0,0	0/1:36,0:35:99:111,0,3524	1/1:18,0:17:25.33:730,25,0	0/0:4,0:4:12.04:0,12,610
chr10	67644905	.	C	CTT	2943.54	PASS	AB=0.670;AC=37;AF=0.661;AN=56;BaseQRankSum=-2.424;DP=574;FS=1.254;HRun=15;HaplotypeScore=100.8911;InbreedingCoeff=0.2674;MQ=58.67;MQ0=5;MQRankSum=-3.341;QD=6.26;ReadPosRankSum=-1.819;VQSLOD=0.4525;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:17,0:29:28.25:37,0,28	1/1:3,1:8:11.49:66,11,0	0/0:15,0:9:1.70:0,2,26	0/0:14,0:9:11.54:0,12,78	0/1:14,0:31:10.15:47,0,10	1/1:17,3:20:11.02:241,11,0	1/1:8,13:23:27.79:262,28,0	1/1:17,10:29:11.69:331,12,0	1/1:12,1:14:18.38:150,18,0	1/1:17,7:25:19.28:152,19,0	1/1:20,3:25:0.46:159,0,0	0/1:8,6:16:0.51:55,0,1	0/0:13,0:15:0.54:0,1,131	1/1:5,9:14:9.03:114,9,0	0/1:11,2:21:35.46:102,0,35	1/1:8,11:20:11.92:191,12,0	0/1:11,0:27:4.50:39,0,5	0/1:7,0:16:17.57:38,0,18	1/1:15,1:16:14.42:107,14,0	1/1:13,7:33:37.91:324,38,0	1/1:6,0:5:0.89:2,1,0	0/0:17,0:19:1.44:0,1,125	0/0:19,0:21:22.36:0,22,164	0/0:16,0:19:2.18:0,2,82	1/1:12,10:24:11.65:96,12,0	1/1:8,12:26:21.84:267,22,0	0/1:12,13:26:3.25:167,0,3	1/1:4,7:13:13.86:157,14,0
chr10	67645648	.	AC	A	751.40	PASS	AB=0.955;AC=20;AF=0.370;AN=54;BaseQRankSum=1.653;DP=341;FS=17.997;HRun=12;HaplotypeScore=49.4808;InbreedingCoeff=-0.0782;MQ=76.40;MQ0=3;MQRankSum=-0.199;QD=3.60;ReadPosRankSum=0.928;VQSLOD=-0.4158;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:24,1:25:29.20:29,0,109	1/1:3,0:3:2.98:23,3,0	0/0:26,1:16:15.48:0,15,166	0/0:16,0:12:0.79:0,1,64	0/0:14,0:14:8.91:0,9,79	0/1:10,0:10:25.25:25,0,54	0/1:15,0:16:30.47:30,0,85	0/1:16,0:16:9.42:16,0,9	0/1:6,1:7:39.46:54,0,39	0/1:11,1:12:45.02:45,0,63	0/0:5,0:6:6:0,6,54	0/0:5,0:5:6:0,6,55	0/0:6,0:6:11.98:0,12,108	0/1:12,0:12:47.37:47,0,121	0/0:20,0:20:26.62:0,27,219	0/0:13,0:13:19.36:0,19,163	1/1:25,1:26:25.53:174,26,0	1/1:27,3:31:24.34:301,24,0	0/1:9,0:9:11.56:12,0,52	0/1:5,0:6:17.16:17,0,25	0/1:10,0:9:23.44:23,0,30	1/1:9,0:9:8.79:61,9,0	0/0:6,1:7:6.06:0,6,36	0/1:10,0:10:24.60:25,0,73	0/1:4,3:7:34.41:34,0,43	0/0:7,0:8:2.94:0,3,18	0/0:9,0:9:13.23:0,13,105	./.
chr10	67646127	.	AATTATTATTATT	A	985.37	PASS	AB=0.714;AC=5;AF=0.104;AN=48;BaseQRankSum=3.328;DP=245;FS=1.242;HRun=0;HaplotypeScore=89.4344;InbreedingCoeff=0.3809;MQ=63.37;MQ0=1;MQRankSum=-4.842;QD=29.86;ReadPosRankSum=-0.697;VQSLOD=2.4934;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:17:21.07:0,21,1035	1/1:0,2:2:3.01:104,3,0	./.	./.	0/0:5,0:5:3.01:0,3,163	0/0:9,0:9:18.06:0,18,929	0/0:6,0:6:9.03:0,9,449	0/0:35,0:35:48.16:0,48,2119	0/0:5,0:6:9.03:0,9,431	0/0:5,0:5:9.03:0,9,435	0/0:10,0:10:15.05:0,15,874	0/0:6,0:6:6.02:0,6,297	0/0:5,0:11:17.53:0,18,178	0/0:5,0:5:3.01:0,3,176	0/0:8,0:8:9.03:0,9,526	0/0:8,0:8:18.05:0,18,794	1/1:9,7:16:18.06:623,18,0	0/1:9,6:15:99:370,0,141	0/0:9,0:9:17.99:0,18,638	0/0:5,0:5:6.02:0,6,244	0/0:4,0:4:3.01:0,3,176	./.	./.	0/0:2,0:2:3.01:0,3,71	0/0:15,0:15:30.10:0,30,1599	0/0:6,0:8:15.04:0,15,525	0/0:6,0:6:15.05:0,15,876	0/0:15,0:18:18.06:0,18,907
chr10	67647405	.	TTTTG	T	14911.30	PASS	AB=1.000;AC=39;AF=0.696;AN=56;BaseQRankSum=-11.002;DP=648;FS=4.684;HRun=0;HaplotypeScore=147.3282;InbreedingCoeff=0.8813;MQ=68.69;MQ0=6;MQRankSum=-1.747;QD=32.35;ReadPosRankSum=3.781;VQSLOD=4.3747;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,41:45:92.89:1525,93,0	1/1:0,10:10:17.79:299,18,0	0/0:27,0:18:4.33:0,4,414	0/0:34,0:20:9.83:0,10,316	1/1:1,23:24:63.91:1097,64,0	1/1:1,15:15:27.05:448,27,0	1/1:1,18:19:36.12:633,36,0	0/1:29,0:28:17.53:18,0,225	1/1:0,18:18:36.12:629,36,0	1/1:4,25:29:78.26:1319,78,0	1/1:0,11:11:26.91:346,27,0	1/1:0,20:20:33.11:588,33,0	0/0:20,0:19:44.01:0,44,272	1/1:1,24:25:56.99:1012,57,0	1/1:1,24:25:60.05:1070,60,0	1/1:1,23:24:17.60:721,18,0	1/1:2,29:31:44.94:758,45,0	1/1:1,23:23:51.17:910,51,0	1/1:3,25:26:72.13:1012,72,0	1/1:1,16:17:42.14:714,42,0	1/1:5,22:27:24.08:428,24,0	0/0:23,0:23:35.93:0,36,313	0/0:21,0:21:38.74:0,39,223	0/0:26,0:26:54.45:0,54,318	1/1:1,12:13:27.09:482,27,0	0/0:14,0:14:33.12:0,33,216	1/1:1,25:26:51.13:901,51,0	0/0:20,0:19:55.77:0,56,362
chr10	67647408	.	TG	T	9033.44	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-0.237;DP=623;FS=7.263;HRun=1;HaplotypeScore=135.1864;InbreedingCoeff=0.8888;MQ=67.71;MQ0=6;MQRankSum=-2.028;QD=16.13;ReadPosRankSum=6.779;VQSLOD=4.8402;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:43,0:43:84.21:469,84,0	1/1:10,0:10:12.52:72,13,0	0/0:29,0:18:19.33:0,19,296	0/0:34,0:19:10.82:0,11,278	1/1:24,0:24:39.39:317,39,0	1/1:16,0:15:20.96:121,21,0	1/1:18,0:18:34.31:178,34,0	1/1:1,25:25:69.12:851,69,0	1/1:18,0:18:34.88:192,35,0	1/1:26,0:26:65.82:349,66,0	1/1:11,0:11:26.34:157,26,0	1/1:20,0:20:31.87:171,32,0	1/1:0,19:18:45.15:612,45,0	1/1:24,0:24:54.99:295,55,0	1/1:24,0:24:57.94:312,58,0	1/1:24,0:24:4.20:179,4,0	1/1:30,0:30:28.33:201,28,0	1/1:24,0:23:49.32:266,49,0	1/1:27,0:25:50.58:321,51,0	1/1:16,0:16:36.68:187,37,0	1/1:22,0:22:23.19:125,23,0	1/1:5,17:22:59.38:770,59,0	1/1:2,18:20:30.66:489,31,0	1/1:0,25:25:57.19:788,57,0	1/1:12,0:12:26.12:141,26,0	1/1:5,9:14:40.36:518,40,0	1/1:25,0:25:48.96:258,49,0	1/1:4,16:19:52.81:695,53,0
chr10	67648965	.	CCTAA	C	16572.53	PASS	AB=0.905;AC=29;AF=0.518;AN=56;BaseQRankSum=12.186;DP=738;FS=8.661;HRun=0;HaplotypeScore=168.2657;InbreedingCoeff=0.9284;MQ=90.68;MQ0=0;MQRankSum=-9.189;QD=41.54;ReadPosRankSum=5.262;VQSLOD=4.3068;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,99,2538	0/0:26,0:26:78.25:0,78,2012	0/0:33,0:33:92.51:0,93,2281	0/0:32,0:32:85.33:0,85,1784	0/0:16,0:16:48.09:0,48,1136	1/1:3,11:14:33.11:639,33,0	1/1:1,24:25:54.18:997,54,0	0/0:31,0:31:90.31:0,90,2421	1/1:2,21:23:60.20:1115,60,0	1/1:1,30:31:87.26:1593,87,0	1/1:2,13:15:33.11:638,33,0	1/1:0,28:28:69.23:1238,69,0	0/0:25,0:25:69.24:0,69,1853	1/1:0,21:21:51.17:963,51,0	1/1:1,27:28:63.21:1196,63,0	1/1:2,25:27:66.23:1253,66,0	0/0:34,0:34:99:0,102,2605	0/0:19,0:19:54.19:0,54,1427	1/1:4,23:27:63.18:1141,63,0	1/1:0,29:29:78.27:1485,78,0	1/1:0,39:39:96.33:1857,96,0	0/0:22,0:22:63.18:0,63,1569	0/0:22,0:22:63.21:0,63,1672	0/0:27,0:26:81.26:0,81,2153	1/1:1,28:29:63.22:1211,63,0	0/1:34,4:38:99:112,0,2506	1/1:5,20:25:60.20:1136,60,0	0/0:18,0:18:51.18:0,51,1396
chr10	67650601	.	AATGCCTGGCAGCCCTGCTTAGAGCAGAGCCAGG	A	4593.82	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.423;DP=642;FS=0.000;HRun=0;HaplotypeScore=497.0782;InbreedingCoeff=0.9929;MQ=83.36;MQ0=0;MQRankSum=-6.255;QD=102.08;ReadPosRankSum=-0.462;VQSLOD=2.9294;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,20:20:24.08:1844,24,0	0/0:7,0:7:18.06:0,18,2045	0/0:21,0:21:47.81:0,48,2706	0/0:19,0:19:48.12:0,48,2598	1/1:11,14:25:50.90:2750,51,0	0/0:28,0:28:81.28:0,81,9190	0/0:35,0:35:99:0,102,12400	0/0:39,0:38:99:0,105,7245	0/0:18,0:18:48.16:0,48,5885	0/0:18,0:18:54.18:0,54,5697	0/0:18,0:18:53.76:0,54,5731	0/0:17,0:17:45.13:0,45,4543	0/0:32,0:32:90.18:0,90,9762	0/0:17,0:17:51.18:0,51,5849	0/0:19,0:19:54.19:0,54,5950	0/0:12,0:12:36.12:0,36,4358	0/0:42,0:42:99:0,117,13603	0/0:24,0:24:63.20:0,63,7281	0/0:23,0:23:63.16:0,63,6750	0/0:11,0:11:33.10:0,33,3866	0/0:79,0:79:99:0,226,26133	0/0:10,0:10:27.09:0,27,2955	0/0:9,0:9:27.08:0,27,3125	0/0:28,0:28:81.28:0,81,10551	0/0:12,0:12:33.11:0,33,4264	0/0:22,0:22:63.22:0,63,7233	0/0:28,0:27:72.23:0,72,7687	0/0:9,0:9:27.09:0,27,3287
chr10	67650763	.	GT	G	5015.38	PASS	AB=0.786;AC=38;AF=0.679;AN=56;BaseQRankSum=4.021;DP=470;FS=36.816;HRun=8;HaplotypeScore=104.9082;InbreedingCoeff=0.7661;MQ=65.64;MQ0=10;MQRankSum=-0.492;QD=16.34;ReadPosRankSum=-0.112;VQSLOD=2.6998;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,10:18:22.25:312,22,0	1/1:3,4:7:6.82:139,7,0	0/0:49,0:16:31.38:0,31,337	0/1:48,0:16:28.33:28,0,144	1/1:5,15:19:50.06:457,50,0	1/1:0,15:15:45.07:434,45,0	1/1:4,6:10:11.96:164,12,0	0/0:30,0:30:66.86:0,67,756	1/1:0,7:7:21.03:203,21,0	1/1:1,14:15:41.27:404,41,0	1/1:8,5:13:3.81:104,4,0	1/1:2,4:6:8.83:111,9,0	0/0:19,0:19:38.66:0,39,429	1/1:2,5:7:12.09:140,12,0	1/1:3,9:12:29.08:263,29,0	0/1:2,6:8:2.42:153,0,2	1/1:4,16:20:32.44:435,32,0	1/1:7,11:18:26.84:317,27,0	1/1:5,16:20:37.79:399,38,0	1/1:3,10:12:25.60:283,26,0	1/1:0,3:3:9.01:87,9,0	0/0:5,0:5:15.05:0,15,181	0/0:7,0:7:17.54:0,18,188	0/0:6,0:6:18.06:0,18,217	1/1:14,12:26:2.25:285,2,0	0/0:17,1:18:24.01:0,24,525	1/1:6,11:17:18.78:296,19,0	0/0:29,0:25:58.19:0,58,679
chr10	67651104	.	GA	G	812.26	PASS	AB=0.913;AC=10;AF=0.179;AN=56;BaseQRankSum=7.313;DP=646;FS=3.986;HRun=11;HaplotypeScore=73.3989;InbreedingCoeff=0.5633;MQ=71.41;MQ0=0;MQRankSum=0.243;QD=6.20;ReadPosRankSum=0.994;VQSLOD=2.0190;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:17,2:19:1.16:1,0,397	1/1:0,11:11:23.96:197,24,0	0/1:25,1:25:15.37:15,0,235	0/0:17,1:14:2.22:0,2,177	0/0:25,0:25:57.14:0,57,607	0/0:28,0:28:75.81:0,76,780	0/0:22,1:23:35.51:0,36,583	0/0:44,3:48:68.08:0,68,1116	0/0:22,1:24:38.35:0,38,597	0/0:27,1:28:38.48:0,38,594	0/0:17,0:17:42.10:0,42,442	0/0:26,0:27:62.99:0,63,654	0/0:24,1:26:17.58:0,18,524	0/0:12,0:12:24.06:0,24,256	0/0:21,0:21:53.93:0,54,557	0/0:18,0:18:48.11:0,48,506	1/1:3,19:22:50.93:418,51,0	1/1:4,16:20:38.95:320,39,0	0/0:25,1:30:31.82:0,32,465	0/0:27,1:28:56.49:0,56,778	0/1:13,2:15:10.19:10,0,313	0/1:16,2:18:1.17:1,0,400	0/0:28,0:28:66.14:0,66,683	0/0:14,0:15:41.93:0,42,424	0/0:19,0:19:48.12:0,48,512	0/0:25,0:25:60.13:0,60,630	0/0:26,0:26:72.18:0,72,767	0/0:27,0:29:68.86:0,69,693
chr10	67655544	.	CT	C	2754.41	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=9.238;DP=670;FS=5.535;HRun=3;HaplotypeScore=65.7333;InbreedingCoeff=0.9975;MQ=65.28;MQ0=1;MQRankSum=-0.222;QD=32.40;ReadPosRankSum=-1.508;VQSLOD=3.3574;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,111,1547	1/1:1,6:7:18.06:223,18,0	0/0:20,0:16:36.12:0,36,511	0/0:24,0:22:51.17:0,51,721	0/0:26,0:26:72.23:0,72,1019	0/0:22,0:22:66.19:0,66,914	0/0:29,0:29:87.29:0,87,1253	1/1:2,30:32:87.25:1055,87,0	0/0:24,0:24:72.23:0,72,1010	0/0:31,0:31:90.30:0,90,1289	0/0:17,0:17:42.08:0,42,548	0/0:19,0:19:57.19:0,57,821	0/0:17,0:17:51.17:0,51,734	0/0:23,0:23:66.21:0,66,932	0/0:42,0:42:99:0,126,1738	0/0:25,0:24:72.23:0,72,1019	1/1:0,34:34:99:1227,99,0	1/1:0,12:12:33.10:409,33,0	0/0:18,0:18:51.16:0,51,699	0/0:16,0:16:39.10:0,39,508	0/0:34,0:34:99:0,99,1408	0/0:23,0:23:66.19:0,66,894	0/0:24,0:24:60.17:0,60,812	0/0:28,0:28:84.28:0,84,1210	0/0:20,0:20:57.19:0,57,816	0/0:30,0:30:90.28:0,90,1247	0/0:25,0:25:72.21:0,72,999	0/0:10,0:10:30.10:0,30,432
chr10	67655876	.	C	CA	2260.12	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=4.474;DP=517;FS=2.382;HRun=4;HaplotypeScore=93.3108;InbreedingCoeff=0.8951;MQ=64.71;MQ0=0;MQRankSum=-3.851;QD=28.25;ReadPosRankSum=2.193;VQSLOD=3.3545;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:60.16:0,60,674	0/0:8,0:8:24.04:0,24,259	0/0:16,0:14:38.58:0,39,412	0/0:18,0:17:25.40:0,25,369	0/0:24,0:24:45.10:0,45,488	0/0:19,0:19:12.03:0,12,134	0/0:23,0:23:63.18:0,63,711	0/0:27,0:27:78.08:0,78,857	0/0:15,0:15:18.05:0,18,202	0/0:18,0:18:42.58:0,43,469	0/0:14,0:14:33.07:0,33,354	0/0:17,0:17:15.04:0,15,169	1/1:1,16:17:42.14:575,42,0	0/0:15,0:15:12.03:0,12,136	0/0:19,0:19:6.01:0,6,66	0/0:23,0:23:26.94:0,27,302	0/0:24,0:24:39.10:0,39,430	0/0:11,0:11:30.09:0,30,339	0/0:17,0:17:51.04:0,51,568	0/0:19,0:19:39.11:0,39,440	0/0:26,0:26:63.18:0,63,708	1/1:6,13:19:42.05:525,42,0	1/1:4,22:26:66.63:852,67,0	1/1:2,16:18:35.88:468,36,0	0/0:18,0:18:6.02:0,6,68	0/0:18,0:18:54.15:0,54,612	0/0:13,0:13:33.09:0,33,370	0/0:2,0:2:6.02:0,6,68
chr10	67655894	.	G	GTA	2252.24	PASS	AB=0.938;AC=26;AF=0.542;AN=48;BaseQRankSum=2.844;DP=507;FS=0.000;HRun=0;HaplotypeScore=123.4618;InbreedingCoeff=0.5986;MQ=57.87;MQ0=7;MQRankSum=0.483;QD=7.71;ReadPosRankSum=0.921;VQSLOD=3.1383;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:27:14.96:119,15,0	0/0:7,0:7:4.14:0,4,28	0/0:24,0:17:44.66:0,45,482	0/0:25,0:21:53.27:0,53,566	./.	0/0:7,14:19:0:0,0,0	1/1:24,0:23:26.88:228,27,0	0/0:27,0:26:25.42:0,25,205	./.	1/1:4,15:18:26.44:288,26,0	0/1:8,4:12:9.35:59,0,9	1/1:14,0:14:3.89:31,4,0	1/1:15,0:15:39:377,39,0	0/0:4,11:14:0.47:0,0,1	0/1:20,0:20:0:0,0,0	./.	0/1:19,0:19:1.78:2,0,95	0/0:9,0:9:11.08:0,11,87	1/1:18,0:17:38.30:411,38,0	0/0:7,15:21:0:0,0,0	1/1:21,0:20:23.96:210,24,0	1/1:20,0:20:14.83:108,15,0	1/1:26,0:26:20.97:189,21,0	1/1:18,0:18:20.72:180,21,0	./.	0/1:22,0:20:3.03:3,0,188	1/1:17,0:16:21.58:204,22,0	0/0:2,0:2:0.37:0,0,1
chr10	67655896	.	A	AATATGTG	507.23	PASS	AB=0.931;AC=17;AF=0.327;AN=52;BaseQRankSum=8.499;DP=539;FS=5.061;HRun=0;HaplotypeScore=161.8896;InbreedingCoeff=-0.1405;MQ=53.09;MQ0=8;MQRankSum=-6.048;QD=1.87;ReadPosRankSum=0.674;VQSLOD=1.8690;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:32:5.05:0,5,62	0/0:7,0:7:6.85:0,7,85	0/0:22,0:15:45.15:0,45,981	0/0:24,0:20:54.18:0,54,1087	0/1:20,0:20:0:0,0,0	0/0:21,0:19:0:0,0,0	0/1:24,0:23:12.01:12,0,92	0/1:25,0:24:37.43:37,0,495	./.	0/1:20,0:18:78.05:154,0,78	0/1:12,0:12:9.47:9,0,64	1/1:1,0:19:4.55:30,5,0	0/1:16,0:16:41.26:41,0,88	1/1:16,0:15:2.93:24,3,0	0/0:1,0:25:2.67:0,3,25	0/0:0,1:20:0:0,0,0	0/1:8,0:20:5.37:5,0,273	0/1:9,0:10:26.88:27,0,208	0/1:6,0:21:99:176,0,111	0/0:24,0:22:1.82:0,2,5	0/1:21,0:20:2.17:2,0,80	0/0:20,0:20:14.54:0,15,86	0/1:25,0:25:8.93:9,0,68	0/0:17,0:18:10.55:0,11,92	./.	0/0:22,0:20:25.40:0,25,546	0/1:17,0:16:39.79:109,0,40	0/1:3,0:3:4.67:5,0,46
chr10	67657579	.	TG	T	1220.91	PASS	AB=0.542;AC=3;AF=0.054;AN=56;BaseQRankSum=9.310;DP=736;FS=0.632;HRun=2;HaplotypeScore=77.7803;InbreedingCoeff=0.6477;MQ=85.75;MQ0=0;MQRankSum=-2.077;QD=30.52;ReadPosRankSum=2.382;VQSLOD=3.3456;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,156,2276	0/0:15,0:15:45.15:0,45,665	0/0:31,0:31:87.14:0,87,1228	0/0:28,1:27:63.02:0,63,771	0/0:17,0:17:51.17:0,51,764	0/0:26,0:26:78.26:0,78,1165	0/0:22,0:22:66.21:0,66,969	0/0:26,0:26:78.26:0,78,1143	0/0:23,0:23:69.22:0,69,1012	0/0:29,0:29:84.28:0,84,1250	0/0:14,0:14:42.14:0,42,629	0/0:36,0:36:99:0,108,1598	0/0:20,0:20:60.20:0,60,899	0/0:23,0:23:66.22:0,66,979	0/0:27,0:27:78.26:0,78,1169	0/0:30,0:30:90.28:0,90,1326	0/0:37,0:37:99:0,111,1635	0/0:17,0:17:48.16:0,48,714	0/0:25,0:25:75.22:0,75,1057	0/0:19,0:19:57.19:0,57,854	0/0:44,0:44:99:0,129,1841	0/0:20,0:20:60.20:0,60,899	0/0:22,0:22:66.20:0,66,949	0/0:41,0:41:99:0,123,1835	0/0:27,0:27:81.25:0,81,1172	0/1:4,22:26:59.69:782,0,60	0/0:24,0:24:72.23:0,72,1057	1/1:0,14:14:42.14:545,42,0
chr10	67658059	.	CATTCATTCATTT	C	16644.91	PASS	AB=1.000;AC=33;AF=0.589;AN=56;BaseQRankSum=-5.700;DP=690;FS=1.973;HRun=0;HaplotypeScore=256.6590;InbreedingCoeff=0.6324;MQ=63.32;MQ0=1;MQRankSum=-10.670;QD=34.18;ReadPosRankSum=1.338;VQSLOD=3.9035;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:23:18.38:18,0,35	0/0:11,0:11:30.07:0,30,1077	0/0:20,0:18:37.34:0,37,1015	0/0:13,0:12:21.06:0,21,661	0/1:39,0:39:79.45:177,0,79	1/1:4,21:25:48.16:1462,48,0	1/1:7,16:23:21.07:647,21,0	0/0:41,0:41:99:0,109,2872	1/1:4,17:21:36.12:1034,36,0	1/1:5,26:31:65.90:1776,66,0	1/1:5,19:24:44.91:908,45,0	1/1:2,34:36:69.24:2111,69,0	0/0:27,0:27:48.07:0,48,1056	1/1:1,23:24:30.10:811,30,0	1/1:6,19:25:42.14:1174,42,0	1/1:0,23:23:48.16:1356,48,0	0/0:26,0:26:72.20:0,72,3035	0/0:17,0:17:36.08:0,36,1573	1/1:1,13:13:38.84:713,39,0	1/1:1,21:22:47.64:1386,48,0	1/1:20,0:20:41.03:389,41,0	0/1:31,0:31:62.53:63,0,928	0/0:23,0:23:23.08:0,23,792	0/0:25,0:25:48.16:0,48,1075	1/1:3,30:33:51.18:1569,51,0	0/1:31,0:31:99:109,0,2250	1/1:3,26:29:33.11:925,33,0	0/1:13,0:13:15.91:16,0,910
chr10	67658063	.	CATTCATTT	C	10430.90	PASS	AB=1.000;AC=35;AF=0.625;AN=56;BaseQRankSum=7.458;DP=670;FS=2.472;HRun=0;HaplotypeScore=228.1526;InbreedingCoeff=0.7628;MQ=59.85;MQ0=3;MQRankSum=-10.075;QD=22.53;ReadPosRankSum=-0.085;VQSLOD=4.4893;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,22:23:26.94:525,27,0	0/0:11,0:11:21.77:0,22,730	0/0:20,0:16:36.97:0,37,738	0/0:10,0:10:24.05:0,24,547	1/1:3,34:37:82.84:995,83,0	1/1:23,0:23:47.84:752,48,0	1/1:20,0:20:20.94:336,21,0	0/0:42,0:42:83.70:0,84,1952	1/1:20,0:20:35.80:513,36,0	1/1:27,0:26:65.88:1034,66,0	1/1:21,0:21:44.26:431,44,0	1/1:35,0:35:68.76:1087,69,0	0/0:26,0:26:46.07:0,46,244	1/1:23,0:23:29.74:386,30,0	1/1:23,0:23:41.73:572,42,0	1/1:23,0:23:47.69:668,48,0	0/0:28,0:28:72.17:0,72,2033	0/0:18,0:18:36.08:0,36,1090	1/1:14,0:13:38.84:474,39,0	1/1:22,0:22:47.90:792,48,0	1/1:19,0:19:41.11:301,41,0	0/1:33,0:33:99:114,0,133	0/0:24,0:24:10.32:0,10,149	0/0:27,0:27:46:0,46,235	1/1:31,0:31:50.83:811,51,0	0/1:28,0:28:99:109,0,1288	1/1:29,0:29:32.57:445,33,0	0/1:12,0:12:86.86:87,0,509
chr10	67658067	.	CATTT	C	10143.91	PASS	AB=1.000;AC=43;AF=0.768;AN=56;BaseQRankSum=6.704;DP=672;FS=0.000;HRun=0;HaplotypeScore=190.3382;InbreedingCoeff=0.6962;MQ=59.20;MQ0=3;MQRankSum=-7.312;QD=17.58;ReadPosRankSum=3.649;VQSLOD=4.5530;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:22:26.73:227,27,0	0/0:14,0:14:17.77:0,18,431	0/0:21,0:17:42.95:0,43,597	0/0:13,0:12:26.50:0,26,448	1/1:35,0:35:82.30:555,82,0	1/1:22,0:22:47.81:443,48,0	1/1:17,0:17:20.92:196,21,0	0/1:43,0:43:71.93:72,0,1104	1/1:19,0:19:35.78:315,36,0	1/1:26,0:25:65.81:629,66,0	1/1:20,0:20:44.25:317,44,0	1/1:35,0:35:68.71:638,69,0	1/1:0,27:27:48.15:897,48,0	1/1:23,0:23:29.73:245,30,0	1/1:22,0:22:41.66:351,42,0	1/1:23,0:23:47.66:414,48,0	0/0:28,0:28:72.16:0,72,1168	0/0:19,0:19:36.07:0,36,623	1/1:14,0:13:38.82:334,39,0	1/1:22,0:22:47.46:457,47,0	1/1:24,0:24:54.21:364,54,0	1/1:0,34:34:80.16:1014,80,0	1/1:0,23:23:41.42:710,41,0	1/1:1,26:27:48.16:908,48,0	1/1:30,0:30:50.80:474,51,0	0/1:28,0:28:99:222,0,296	1/1:29,0:29:32.60:277,33,0	0/1:12,0:12:86.99:87,0,153
chr10	67658070	.	T	TCA	584.37	PASS	AB=0.750;AC=2;AF=0.036;AN=56;BaseQRankSum=-4.649;DP=658;FS=2.405;HRun=0;HaplotypeScore=202.7170;InbreedingCoeff=-0.0378;MQ=57.69;MQ0=3;MQRankSum=4.130;QD=14.61;ReadPosRankSum=0.104;VQSLOD=3.3328;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:26.19:0,26,182	0/0:14,0:14:34.33:0,34,323	0/0:21,0:17:44.91:0,45,682	0/0:13,0:12:23.32:0,23,439	0/0:34,0:34:65.22:0,65,647	0/0:21,0:21:45.77:0,46,274	0/0:16,0:16:19.99:0,20,118	0/0:44,0:44:99:0,122,1512	0/0:17,0:17:34.58:0,35,221	0/0:26,0:25:33.42:0,33,284	0/0:19,0:19:25.10:0,25,280	0/0:35,0:35:65.81:0,66,393	0/0:27,0:27:44.25:0,44,199	0/0:23,0:23:29.12:0,29,201	0/0:20,0:20:40.58:0,41,273	0/0:23,0:23:46.18:0,46,301	0/0:29,0:29:68.34:0,68,614	0/0:17,0:17:34.93:0,35,323	0/0:14,0:13:18.70:0,19,176	0/0:21,0:21:45.53:0,46,255	0/0:23,0:23:27.17:0,27,325	0/0:34,0:34:77.40:0,77,508	0/0:23,0:23:38.57:0,39,180	0/0:26,0:26:43.91:0,44,189	0/0:30,0:30:48.57:0,49,288	0/1:16,12:28:56.75:518,0,57	0/0:26,0:26:31.79:0,32,214	0/1:9,3:12:80.54:155,0,81
chr10	67658071	.	T	TATTC	4509.26	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=-11.908;DP=664;FS=1.002;HRun=0;HaplotypeScore=211.5222;InbreedingCoeff=0.7740;MQ=57.66;MQ0=3;MQRankSum=7.274;QD=17.34;ReadPosRankSum=-3.880;VQSLOD=3.9420;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:12.47:0,12,106	1/1:5,10:15:25.24:491,25,0	0/0:21,0:17:18.03:0,18,256	0/0:13,0:12:14.06:0,14,195	0/1:35,0:35:2.99:3,0,90	0/0:21,0:21:32.99:0,33,289	0/0:16,0:16:13.03:0,13,77	1/1:41,0:41:54.13:844,54,0	0/0:17,0:17:20.85:0,21,174	0/1:28,0:27:35.88:36,0,297	0/0:20,0:20:9.99:0,10,69	0/0:37,0:37:48.02:0,48,428	0/0:27,0:27:40.24:0,40,354	0/0:24,0:24:13.82:0,14,110	0/0:20,0:20:18:0,18,182	0/0:23,0:23:27.01:0,27,241	1/1:9,20:29:45.15:1089,45,0	1/1:5,12:17:21.07:508,21,0	0/0:14,0:13:14.47:0,14,131	0/0:22,0:22:15.98:0,16,220	1/1:23,0:23:12.94:72,13,0	0/1:34,0:34:0:0,0,301	0/0:24,0:24:27.97:0,28,291	0/0:26,0:26:47.95:0,48,401	0/0:31,0:31:34:0,34,283	1/1:14,0:26:48.16:1058,48,0	0/0:26,0:26:18.01:0,18,161	1/1:9,0:12:18.06:407,18,0
chr10	67660124	.	CA	C	528.13	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.083;DP=433;FS=22.646;HRun=2;HaplotypeScore=55.0978;InbreedingCoeff=0.9764;MQ=92.62;MQ0=0;MQRankSum=-2.428;QD=24.01;ReadPosRankSum=1.289;VQSLOD=2.1165;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:54.11:0,54,782	0/0:7,0:7:21.07:0,21,315	0/0:25,0:25:66.21:0,66,954	0/0:11,0:11:33.02:0,33,400	0/0:22,0:22:66.22:0,66,987	0/0:16,0:16:45.15:0,45,674	0/0:6,0:6:18.06:0,18,270	0/0:38,0:38:99:0,114,1624	0/0:16,0:16:48.16:0,48,718	0/0:19,0:19:54.18:0,54,792	0/0:11,0:11:33.11:0,33,494	0/0:15,0:15:45.15:0,45,675	0/0:17,0:17:51.17:0,51,764	0/0:9,0:9:27.09:0,27,403	0/0:13,0:13:39.13:0,39,585	0/0:18,0:18:54.18:0,54,809	1/1:0,22:22:48.16:623,48,0	0/0:19,0:19:42.11:0,42,600	0/0:13,0:13:36.12:0,36,540	0/0:17,0:17:48.16:0,48,711	0/0:12,0:12:36.12:0,36,540	0/0:8,0:8:24.07:0,24,340	0/0:7,0:7:21.07:0,21,313	0/0:13,0:13:39.13:0,39,585	0/0:19,0:19:57.16:0,57,815	0/0:15,0:15:42.14:0,42,612	0/0:15,0:15:45.14:0,45,650	0/0:11,0:11:21.05:0,21,276
chr10	67660207	.	CAT	C	4173.67	PASS	AB=0.875;AC=17;AF=0.315;AN=54;BaseQRankSum=-9.490;DP=223;FS=0.000;HRun=0;HaplotypeScore=34.5234;InbreedingCoeff=0.7242;MQ=70.97;MQ0=0;MQRankSum=-0.057;QD=29.39;ReadPosRankSum=-0.585;VQSLOD=4.2228;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,14:15:27.09:365,27,0	1/1:0,1:1:3.01:41,3,0	./.	0/1:6,0:5:8.10:8,0,10	1/1:0,12:12:33.11:446,33,0	0/0:10,0:10:27.08:0,27,424	0/0:1,0:1:3.01:0,3,51	1/1:6,30:36:90.29:1202,90,0	0/0:5,0:5:15.05:0,15,254	0/0:7,0:7:18.06:0,18,306	0/0:4,0:4:12.04:0,12,204	0/0:2,0:2:6.02:0,6,102	0/0:5,0:5:12.04:0,12,204	0/0:3,0:3:9.03:0,9,153	0/0:5,0:5:12.04:0,12,204	0/0:2,0:2:6.02:0,6,102	1/1:5,18:23:57.12:747,57,0	1/1:1,20:21:36.12:487,36,0	0/0:7,0:7:18.06:0,18,298	0/0:3,0:3:9.03:0,9,152	0/0:6,0:6:18.06:0,18,306	0/0:1,0:1:3.01:0,3,46	0/0:1,0:1:3.01:0,3,51	0/0:1,0:1:3.01:0,3,51	0/0:6,0:6:15.04:0,15,231	1/1:1,10:11:30.09:391,30,0	0/0:9,0:9:21.07:0,21,357	1/1:0,16:16:36.12:487,36,0
chr10	67662887	.	G	GT	658.79	PASS	AC=10;AF=0.185;AN=54;BaseQRankSum=4.061;DP=278;FS=0.000;HRun=1;HaplotypeScore=41.9713;InbreedingCoeff=0.6782;MQ=88.93;MQ0=1;MQRankSum=-3.141;QD=9.15;ReadPosRankSum=1.018;VQSLOD=0.9271;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:39.01:0,39,397	1/1:0,1:1:3:27,3,0	0/0:19,0:17:31.79:0,32,459	0/0:10,0:9:10.09:0,10,141	0/0:19,0:19:52.67:0,53,518	0/0:6,0:6:18.06:0,18,246	0/0:16,0:16:45.13:0,45,605	1/1:13,5:19:10.96:173,11,0	1/1:2,5:8:6.20:64,6,0	0/0:2,0:2:6.02:0,6,82	0/0:2,0:2:3.01:0,3,42	0/0:5,0:5:12.04:0,12,166	0/0:10,0:10:30.10:0,30,409	0/0:8,0:8:24.08:0,24,334	0/0:11,0:11:33.04:0,33,436	0/0:6,0:6:18.02:0,18,229	1/1:2,20:23:16.37:339,16,0	1/1:4,17:21:4.99:201,5,0	0/0:9,0:9:24.08:0,24,333	0/0:1,0:1:3.01:0,3,41	0/0:24,0:24:69.20:0,69,938	0/0:1,0:1:3.01:0,3,41	./.	0/0:27,0:27:66.22:0,66,891	0/0:3,0:3:9.03:0,9,123	0/0:3,0:3:9.03:0,9,121	0/0:5,0:5:15.05:0,15,206	0/0:1,0:1:3.01:0,3,40
chr10	67662888	.	GT	G	482.71	PASS	AB=0.853;AC=12;AF=0.222;AN=54;BaseQRankSum=-0.914;DP=278;FS=0.756;HRun=12;HaplotypeScore=41.1454;InbreedingCoeff=0.3198;MQ=87.63;MQ0=1;MQRankSum=-0.320;QD=7.00;ReadPosRankSum=3.564;VQSLOD=1.1808;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:3,0:19:25.57:0,26,129	0/0:1,0:1:2.84:0,3,14	0/0:17,1:17:3.47:0,3,175	0/0:9,0:8:5.67:0,6,37	0/0:7,0:20:32.76:0,33,192	0/1:5,1:6:11.22:11,0,74	0/1:13,2:16:1.56:2,0,328	0/0:20,0:20:27.79:0,28,159	0/0:7,0:7:11.52:0,12,68	0/0:2,0:2:0:0,0,0	0/0:2,0:2:6:0,6,56	0/1:5,0:5:11.14:11,0,73	0/1:5,4:10:13.47:82,0,13	0/0:7,1:8:0.81:0,1,190	0/0:11,0:11:21.04:0,21,213	0/0:6,0:6:15.03:0,15,152	0/0:23,0:23:45.78:0,46,259	0/0:20,0:20:28.72:0,29,167	0/0:9,0:9:9.31:0,9,171	0/0:1,0:1:2.98:0,3,21	0/0:22,1:24:33.31:0,33,482	1/1:0,0:1:2.04:6,2,0	./.	1/1:3,24:27:56.76:441,57,0	0/0:3,0:3:6.01:0,6,61	1/1:1,2:3:5.96:44,6,0	0/0:5,0:5:9.02:0,9,91	1/1:0,1:1:2.99:23,3,0
chr10	67663080	.	TATATATATATA	T	641.64	PASS	AB=1.000;AC=19;AF=0.559;AN=34;BaseQRankSum=0.170;DP=62;FS=3.120;HRun=0;HaplotypeScore=33.9207;InbreedingCoeff=0.2884;MQ=70.78;MQ0=9;MQRankSum=-2.459;QD=13.95;ReadPosRankSum=0.449;VQSLOD=0.8387;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	1/1:0,0:1:3.01:84,3,0	0/0:3,0:1:3.01:0,3,34	0/0:8,0:3:5.85:0,6,92	./.	./.	1/1:1,0:1:2.96:19,3,0	1/1:14,2:17:1.15:335,1,0	1/1:2,0:2:2.88:15,3,0	./.	1/1:1,0:1:2.96:19,3,0	0/0:1,0:1:3.01:0,3,70	0/0:1,0:1:3:0,3,25	./.	0/1:3,0:3:14.65:15,0,41	./.	1/1:8,3:8:4.35:203,4,0	1/1:4,0:2:4.56:42,5,0	./.	1/1:2,0:2:3.43:20,3,0	0/1:1,0:1:0:0,0,0	./.	./.	./.	0/1:1,0:1:0:0,0,0	./.	0/0:2,0:2:5.05:0,5,46	0/0:0,0:1:3.01:0,3,50
chr10	67663242	.	A	AT	2108.49	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-8.819;DP=370;FS=30.630;HRun=6;HaplotypeScore=37.7371;InbreedingCoeff=0.9566;MQ=67.47;MQ0=1;MQRankSum=-3.390;QD=29.70;ReadPosRankSum=-0.604;VQSLOD=1.3075;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:69.16:0,69,702	1/1:1,2:3:9.03:113,9,0	0/0:9,0:9:24.04:0,24,240	0/0:5,0:5:12.03:0,12,122	0/0:32,0:32:93.18:0,93,935	0/0:11,0:11:30.05:0,30,299	0/0:12,0:12:33.08:0,33,336	1/1:1,21:21:63.16:770,63,0	1/1:1,10:11:21.07:264,21,0	0/0:20,0:19:54.08:0,54,540	0/0:13,0:13:36.08:0,36,367	0/0:14,0:14:24.04:0,24,245	0/0:10,0:10:24.05:0,24,243	0/0:9,0:9:24.05:0,24,245	0/0:12,0:12:33.01:0,33,324	0/0:10,0:10:21.02:0,21,202	1/1:3,20:23:60.19:755,60,0	1/1:1,11:12:30.10:377,30,0	0/0:18,0:18:51.12:0,51,520	0/0:4,0:4:9.02:0,9,92	0/0:7,0:7:18.04:0,18,183	0/0:10,0:10:30.07:0,30,305	0/0:11,0:11:27.06:0,27,275	0/0:11,0:11:33.08:0,33,336	0/0:7,0:7:18.04:0,18,184	0/0:22,0:22:63.14:0,63,643	0/0:9,0:9:27.06:0,27,275	0/0:13,0:13:21.48:0,21,306
chr10	67663321	.	GTT	G	8114.12	PASS	AB=0.626;AC=39;AF=0.696;AN=56;BaseQRankSum=0.414;DP=518;FS=1.819;HRun=12;HaplotypeScore=79.1398;InbreedingCoeff=0.7325;MQ=68.05;MQ0=4;MQRankSum=0.279;QD=19.89;ReadPosRankSum=5.332;VQSLOD=4.3198;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,39:43:64.49:969,64,0	0/0:2,0:4:11.47:0,11,99	0/0:21,0:18:29.83:0,30,288	0/0:17,0:19:8.21:0,8,225	1/1:9,16:27:47.50:449,47,0	1/1:1,21:23:56.86:561,57,0	1/1:1,10:11:27.06:275,27,0	0/0:22,0:25:41.62:0,42,571	0/0:13,0:13:24.08:0,24,358	1/1:7,15:21:36:362,36,0	1/1:3,9:12:14.93:152,15,0	1/1:4,16:20:44.80:438,45,0	1/1:3,12:15:17.91:183,18,0	1/1:3,19:22:57.06:579,57,0	1/1:2,22:24:63.13:637,63,0	1/1:1,22:21:51.01:518,51,0	0/0:11,0:11:24.07:0,24,335	0/0:14,0:16:38.41:0,38,514	0/1:8,7:17:64.18:143,0,64	0/1:4,12:16:8.22:245,0,8	1/1:2,10:12:24.03:244,24,0	1/1:1,10:12:27.02:266,27,0	1/1:3,8:11:14.97:152,15,0	1/1:2,22:23:46.77:512,47,0	1/1:3,9:12:24.02:244,24,0	1/1:7,21:30:59.54:643,60,0	1/1:2,14:17:38.80:378,39,0	0/1:7,7:15:15.39:164,0,15
chr10	67664523	.	CT	C	5858.49	PASS	AB=0.706;AC=49;AF=0.875;AN=56;BaseQRankSum=-0.652;DP=583;FS=2.181;HRun=14;HaplotypeScore=131.9369;InbreedingCoeff=0.2725;MQ=73.98;MQ0=2;MQRankSum=-2.619;QD=10.59;ReadPosRankSum=3.579;VQSLOD=3.6957;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:12,17:32:26.88:249,0,27	1/1:1,11:13:6.93:184,7,0	0/0:28,1:25:30.86:0,31,240	0/1:16,0:12:1.44:1,0,79	1/1:10,10:21:13.50:208,13,0	1/1:6,17:26:43.69:270,44,0	1/1:5,13:19:40.59:273,41,0	1/1:21,18:40:5.45:299,5,0	1/1:6,9:15:26.72:185,27,0	1/1:12,13:25:18.27:264,18,0	1/1:8,15:24:18.68:264,19,0	0/1:4,8:13:5:106,0,5	1/1:9,9:18:20.18:159,20,0	1/1:9,11:20:23.56:163,24,0	1/1:5,17:23:40.47:273,40,0	1/1:4,13:17:41.58:286,42,0	1/1:9,19:29:12.48:344,12,0	1/1:5,15:21:18.81:266,19,0	1/1:10,14:24:18.73:264,19,0	0/1:13,9:23:20.82:144,0,21	1/1:5,6:11:17.43:123,17,0	1/1:8,13:21:34.64:232,35,0	0/1:6,9:15:1.13:138,0,1	1/1:3,12:15:4.79:178,5,0	1/1:5,15:20:13.79:240,14,0	1/1:7,21:29:49.97:425,50,0	1/1:2,9:14:35.83:222,36,0	1/1:3,5:8:14.87:102,15,0
chr10	67664557	.	A	ATTT	9217.04	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=15.243;DP=458;FS=3.785;HRun=3;HaplotypeScore=150.9249;InbreedingCoeff=0.9697;MQ=81.17;MQ0=0;MQRankSum=-15.678;QD=61.86;ReadPosRankSum=4.545;VQSLOD=4.4973;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:75.23:0,75,1321	0/0:12,0:12:33.11:0,33,615	0/0:27,0:22:57.12:0,57,912	0/0:17,0:14:15.73:0,16,472	0/0:25,0:25:69.24:0,69,1282	1/1:1,14:15:45.14:919,45,0	1/1:1,8:9:27.09:547,27,0	0/0:24,0:24:63.17:0,63,1002	0/0:13,0:13:39.12:0,39,695	1/1:1,17:18:54.19:1150,54,0	1/1:2,4:6:15.05:329,15,0	1/1:1,9:10:27.09:578,27,0	0/0:13,0:13:39.12:0,39,694	1/1:0,16:16:48.16:958,48,0	1/1:3,20:23:69.24:1441,69,0	1/1:1,10:11:33.11:713,33,0	0/0:27,0:27:75.22:0,75,1353	0/0:28,0:28:69.17:0,69,1345	1/1:1,6:7:21.07:434,21,0	1/1:1,10:11:33.11:690,33,0	1/1:1,0:1:3.01:72,3,0	0/0:14,0:14:42.10:0,42,747	0/0:21,0:21:54.16:0,54,932	0/0:24,0:24:69.18:0,69,1218	1/1:0,10:10:30.10:612,30,0	0/0:29,1:30:28.67:0,29,1560	1/1:0,12:12:36.12:775,36,0	0/0:7,0:7:18.06:0,18,335
chr10	67664559	.	GA	G	1103.54	PASS	AB=1.000;AC=25;AF=0.446;AN=56;BaseQRankSum=16.248;DP=458;FS=5.359;HRun=1;HaplotypeScore=162.1331;InbreedingCoeff=0.9610;MQ=81.15;MQ0=0;MQRankSum=-15.804;QD=7.41;ReadPosRankSum=6.973;VQSLOD=0.9549;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:72.25:0,72,1151	0/0:13,0:13:39.12:0,39,598	0/0:27,0:22:57.16:0,57,849	0/0:15,1:14:13.17:0,13,442	0/0:26,0:26:78.24:0,78,1192	1/1:0,14:14:30.45:144,30,0	1/1:0,8:8:20.66:79,21,0	0/0:25,0:25:66.16:0,66,967	0/0:14,0:14:42.13:0,42,648	1/1:1,16:18:43.26:209,43,0	1/1:2,4:6:9.47:36,9,0	1/1:1,9:10:23.34:90,23,0	0/0:13,0:13:39.13:0,39,622	1/1:1,16:17:24.05:101,24,0	1/1:4,20:24:42.83:165,43,0	1/1:1,10:11:24.24:93,24,0	0/0:26,0:26:72.23:0,72,1125	0/0:28,0:28:78.26:0,78,1230	1/1:1,6:7:16.85:80,17,0	1/1:0,10:10:25.93:101,26,0	0/1:2,0:2:0:0,0,0	0/0:14,0:14:39.13:0,39,623	0/0:20,0:20:57.11:0,57,886	0/0:23,0:23:69.19:0,69,1069	1/1:0,10:10:25.68:98,26,0	0/0:29,1:30:79.41:0,79,1356	1/1:0,12:12:31.06:129,31,0	0/0:8,0:8:21.05:0,21,311
chr10	67664563	.	A	ATCTT	15590.72	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=16.591;DP=536;FS=0.000;HRun=0;HaplotypeScore=191.3009;InbreedingCoeff=0.9878;MQ=77.75;MQ0=0;MQRankSum=-18.025;QD=68.38;ReadPosRankSum=1.234;VQSLOD=5.6175;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:75.24:0,75,1533	0/0:13,0:13:39.13:0,39,817	0/0:25,0:22:56.66:0,57,1092	0/0:16,0:14:30.10:0,30,611	0/0:27,0:27:78.22:0,78,1506	1/1:4,14:18:54.19:1366,54,0	1/1:11,8:19:53.98:1124,54,0	0/0:27,0:27:72.23:0,72,1430	0/0:13,0:13:39.13:0,39,818	1/1:15,16:31:93.31:2259,93,0	1/1:7,4:11:27.08:639,27,0	1/1:6,8:15:42.11:1017,42,0	0/0:14,0:14:42.13:0,42,841	1/1:6,16:22:66.20:1548,66,0	1/1:9,20:29:84.28:2034,84,0	1/1:4,10:14:42.14:1043,42,0	0/0:25,0:25:69.24:0,69,1444	0/0:29,0:29:78.25:0,78,1593	1/1:8,6:14:39.13:1011,39,0	1/1:8,10:18:51.11:1148,51,0	1/1:5,0:5:14.96:174,15,0	0/0:14,0:14:39.12:0,39,779	0/0:20,0:20:57.18:0,57,1194	0/0:22,0:22:63.22:0,63,1317	1/1:3,10:13:39.08:896,39,0	0/0:28,1:29:8.34:0,8,1586	1/1:7,12:19:54.18:1332,54,0	0/0:8,0:8:21.07:0,21,439
chr10	67670352	.	TG	T	3591.12	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=4.469;DP=709;FS=6.089;HRun=6;HaplotypeScore=108.5904;InbreedingCoeff=0.9702;MQ=75.31;MQ0=0;MQRankSum=0.112;QD=27.21;ReadPosRankSum=3.062;VQSLOD=3.4418;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,102,1236	1/1:1,4:5:9.02:96,9,0	0/0:12,0:13:24.82:0,25,307	0/0:16,0:16:42.10:0,42,487	0/0:13,0:13:33.02:0,33,349	0/0:16,0:16:36.07:0,36,413	0/0:42,0:42:99:0,111,1433	1/1:4,21:25:63.11:653,63,0	1/1:2,25:27:44.75:714,45,0	0/0:15,0:15:27.02:0,27,296	0/0:7,0:7:18.06:0,18,237	0/0:39,0:39:99:0,117,1537	0/0:24,0:24:66.21:0,66,867	0/0:35,0:35:99:0,99,1275	0/0:29,0:28:87.27:0,87,1130	0/0:27,0:27:78.25:0,78,1026	1/1:1,37:38:99:1128,105,0	1/1:2,35:37:93.23:999,93,0	0/0:23,0:23:50.04:0,50,733	0/0:20,0:20:45.10:0,45,535	0/0:86,0:86:99:0,217,2677	0/0:14,0:14:30.07:0,30,362	0/0:13,0:13:33.11:0,33,434	0/0:43,0:43:99:0,126,1643	0/0:14,0:14:39.11:0,39,485	0/0:22,0:22:53.94:0,54,615	0/0:24,0:24:72.21:0,72,919	0/0:3,0:3:9.03:0,9,118
chr10	67670863	.	T	TC	3899.08	PASS	AB=0.580;AC=8;AF=0.143;AN=56;BaseQRankSum=-8.836;DP=801;FS=22.228;HRun=0;HaplotypeScore=96.3498;InbreedingCoeff=0.7008;MQ=59.48;MQ0=8;MQRankSum=-0.232;QD=34.51;ReadPosRankSum=2.811;VQSLOD=2.0946;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:33:87.29:0,87,1204	0/1:3,11:14:24.64:396,0,25	0/0:31,0:18:54.01:0,54,706	0/0:17,0:10:28.56:0,29,354	0/0:28,0:28:84.27:0,84,1159	0/0:23,0:23:60.20:0,60,839	0/0:23,0:23:69.18:0,69,910	0/1:6,12:16:80.34:530,0,80	1/1:1,27:28:84.26:1314,84,0	0/0:29,0:29:81.27:0,81,1133	0/0:10,0:10:24.07:0,24,315	0/0:48,0:48:99:0,138,1894	0/0:41,0:41:99:0,111,1547	0/0:32,0:32:90.28:0,90,1235	0/0:56,0:56:99:0,165,2200	0/0:41,0:41:99:0,114,1570	1/1:6,21:27:13.79:796,14,0	1/1:3,23:26:53.78:862,54,0	0/0:15,0:13:33.11:0,33,453	0/0:27,0:27:72.23:0,72,989	0/0:56,1:56:99:0,148,2284	0/0:27,1:28:30.29:0,30,968	0/0:18,0:17:51.10:0,51,687	0/0:27,1:28:72.24:0,72,1006	0/0:27,0:27:75.23:0,75,1031	0/0:28,0:28:84.28:0,84,1175	0/0:38,0:38:99:0,105,1424	0/0:9,0:9:27.09:0,27,377
chr10	67670940	.	TC	T	21861.93	PASS	AB=0.658;AC=39;AF=0.696;AN=56;BaseQRankSum=-16.332;DP=909;FS=0.000;HRun=1;HaplotypeScore=151.5891;InbreedingCoeff=-0.2167;MQ=55.36;MQ0=11;MQRankSum=7.389;QD=24.67;ReadPosRankSum=1.308;VQSLOD=4.6903;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:3,20:21:3.27:383,0,3	0/1:9,6:15:99:229,0,295	0/1:37,0:9:5.07:5,0,264	0/0:22,1:8:20.10:0,20,243	1/1:3,38:40:72.68:1344,73,0	0/1:3,30:33:6.04:692,0,6	0/1:5,21:26:27.60:542,0,28	0/1:25,26:46:99:846,0,863	0/1:14,19:33:99:671,0,466	0/1:24,18:41:99:897,0,412	0/1:10,11:19:68.38:374,0,68	1/1:0,33:33:90.30:1257,90,0	1/1:12,44:56:5.30:1622,5,0	1/1:1,34:35:61.20:1109,61,0	1/1:14,37:51:23.51:1631,24,0	1/1:4,51:55:33.29:1733,33,0	0/1:8,5:13:99:136,0,232	0/1:8,8:16:99:260,0,165	0/1:5,9:9:9.51:267,0,10	1/1:3,31:33:25.79:1046,26,0	1/1:16,40:52:10.99:1481,11,0	1/1:6,25:30:31.34:908,31,0	0/1:13,12:24:99:524,0,192	1/1:6,17:23:5.51:514,6,0	0/1:7,22:29:1.46:793,0,1	1/1:7,32:39:25.18:1229,25,0	1/1:5,31:35:20.59:996,21,0	0/1:8,10:18:63.73:374,0,64
chr10	67670972	.	T	TC	568.60	PASS	AB=0.908;AC=7;AF=0.125;AN=56;BaseQRankSum=8.817;DP=984;FS=5.434;HRun=0;HaplotypeScore=223.6548;InbreedingCoeff=-0.1309;MQ=52.97;MQ0=18;MQRankSum=-3.654;QD=2.87;ReadPosRankSum=3.651;VQSLOD=2.9029;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:17,1:18:5.84:6,0,466	0/1:17,0:17:2.67:3,0,511	0/0:41,0:8:23.29:0,23,291	0/0:41,0:13:31.27:0,31,390	0/0:35,1:35:99:0,99,1363	0/0:35,0:35:72.22:0,72,976	0/0:27,1:27:21.22:0,21,822	0/0:51,0:47:19.51:0,20,1311	0/0:47,0:47:46.47:0,46,1627	0/0:49,0:46:99:0,138,1855	0/0:26,0:24:26.14:0,26,610	0/0:42,0:42:99:0,117,1624	0/1:47,8:55:99:224,0,1688	0/0:35,0:35:90.30:0,90,1257	0/0:53,0:53:99:0,153,2092	0/0:53,0:53:99:0,154,2121	0/1:14,1:15:43.62:44,0,432	0/0:16,0:16:21.15:0,21,523	0/0:25,0:21:57.16:0,57,776	0/0:38,0:38:99:0,108,1423	0/0:53,2:50:76.63:0,77,1568	0/1:24,2:25:29.51:30,0,729	0/0:32,1:32:33.59:0,34,1024	0/0:21,0:21:48.09:0,48,628	0/0:24,1:25:21.27:0,21,874	0/1:38,4:41:74.41:74,0,1332	0/0:36,0:35:93.27:0,93,1248	0/1:17,8:24:99:311,0,594
chr10	67671034	.	TC	T	5322.57	PASS	AB=0.771;AC=25;AF=0.446;AN=56;BaseQRankSum=11.846;DP=687;FS=1.394;HRun=1;HaplotypeScore=194.2574;InbreedingCoeff=-0.7846;MQ=52.68;MQ0=7;MQRankSum=-14.605;QD=8.45;ReadPosRankSum=-5.248;VQSLOD=0.1699;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:7,6:13:99:137,0,293	0/1:5,5:10:37.37:167,0,37	0/0:23,0:14:37.40:0,37,509	0/0:19,0:12:14.88:0,15,288	0/1:18,11:29:99:217,0,665	0/1:20,10:29:99:220,0,742	0/1:16,2:18:34.41:34,0,574	0/0:15,0:12:26.95:0,27,311	0/1:20,4:24:99:142,0,271	0/1:20,7:25:99:221,0,743	0/1:18,2:20:23.36:23,0,800	0/1:32,12:44:99:392,0,1284	0/1:24,13:37:99:490,0,887	0/1:24,13:37:99:496,0,746	0/1:32,20:52:99:608,0,1380	0/1:27,15:41:99:468,0,987	0/1:3,4:7:4.87:151,0,5	0/1:4,1:5:30.09:30,0,40	0/1:14,3:15:83.51:84,0,437	0/1:25,5:29:99:118,0,925	0/1:18,7:22:13.65:14,0,529	0/1:20,8:27:99:262,0,691	0/1:18,6:23:96.54:97,0,745	0/1:6,7:13:99:111,0,155	0/1:12,7:19:99:192,0,495	0/1:22,6:28:99:154,0,871	0/1:21,14:35:99:438,0,812	0/1:12,4:15:58.34:58,0,528
chr10	67671048	.	C	CT	11145.69	PASS	AB=0.730;AC=26;AF=0.464;AN=56;BaseQRankSum=-0.599;DP=735;FS=22.105;HRun=2;HaplotypeScore=199.1310;InbreedingCoeff=-0.8529;MQ=49.76;MQ0=9;MQRankSum=-6.465;QD=16.32;ReadPosRankSum=-2.511;VQSLOD=2.2397;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:6,8:14:99:304,0,149	0/1:3,4:8:19.05:186,0,19	0/0:30,0:16:39.12:0,39,482	0/0:22,0:13:36.07:0,36,409	0/1:15,16:31:99:596,0,258	0/1:18,14:31:99:471,0,336	0/1:12,8:19:99:297,0,249	0/1:17,0:13:40.63:41,0,285	0/1:15,12:27:99:569,0,257	0/1:16,12:26:99:452,0,305	0/1:19,4:23:99:198,0,525	0/1:28,18:46:99:719,0,744	0/1:19,23:42:99:900,0,427	0/1:19,17:36:99:664,0,506	0/1:23,26:49:99:1002,0,622	0/1:21,24:43:99:863,0,396	0/1:9,3:12:7.26:209,0,7	0/1:7,2:9:32.76:150,0,33	0/1:13,4:15:99:185,0,241	0/1:20,12:31:99:513,0,470	0/1:20,6:20:99:155,0,105	0/1:19,10:28:99:465,0,405	0/1:17,8:23:99:279,0,422	0/1:7,7:14:79.46:253,0,79	0/1:12,8:20:99:391,0,274	0/1:19,12:31:99:510,0,465	0/1:17,18:35:99:677,0,458	0/1:12,3:14:96.27:96,0,264
chr10	67671786	.	C	CTGTGTGTGTGTGTG	12711.88	PASS	AB=0.733;AC=51;AF=0.911;AN=56;BaseQRankSum=-2.810;DP=995;FS=4.633;HRun=0;HaplotypeScore=271.3910;InbreedingCoeff=0.0762;MQ=51.11;MQ0=8;MQRankSum=0.450;QD=12.78;ReadPosRankSum=5.017;VQSLOD=2.8659;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:12,0:50:6.02:88,6,0	1/1:9,0:8:9.01:202,9,0	0/1:54,0:32:11.25:11,0,275	0/1:53,0:36:84.28:84,0,324	1/1:10,14:34:2.94:36,3,0	1/1:4,24:33:15.05:365,15,0	1/1:46,0:45:62.83:848,63,0	1/1:42,0:38:63.01:1192,63,0	1/1:1,2:23:10.16:448,10,0	1/1:9,30:44:62.58:1501,63,0	1/1:20,0:20:19.49:217,19,0	1/1:11,19:33:2.98:54,3,0	1/1:5,0:34:11.96:354,12,0	1/1:4,15:23:6.02:234,6,0	0/1:13,21:36:0:0,0,0	1/1:6,18:34:17.89:730,18,0	0/1:6,0:50:18.91:470,0,19	1/1:31,0:31:62.91:1436,63,0	1/1:28,0:27:57.06:1042,57,0	1/1:28,0:28:36.46:623,36,0	1/1:26,47:86:9.32:123,9,0	1/1:1,0:21:11.50:121,12,0	1/1:5,0:19:6.01:160,6,0	0/1:7,0:47:0.01:0,0,0	1/1:7,24:39:5.52:107,6,0	1/1:40,0:40:84.08:1512,84,0	1/1:5,15:24:12.44:569,12,0	1/1:1,0:12:3.01:184,3,0
chr10	67671919	.	ATGTGTGTGTGTGTGTGTGTGTGTGTGTG	A	1767.28	PASS	AB=0.805;AC=7;AF=0.125;AN=56;BaseQRankSum=1.288;DP=737;FS=2.670;HRun=0;HaplotypeScore=442.5833;InbreedingCoeff=0.3246;MQ=52.84;MQ0=14;MQRankSum=-2.247;QD=13.92;ReadPosRankSum=-6.361;VQSLOD=-0.4661;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:76.54:0,77,5791	1/1:1,9:10:9.93:369,10,0	0/0:44,0:18:3.01:0,3,42	0/0:55,0:29:8.70:0,9,238	0/0:19,0:19:33.11:0,33,2604	0/0:20,0:22:30.57:0,31,1672	0/0:35,0:37:22.12:0,22,1228	0/1:22,12:33:99:479,0,205	1/1:10,4:14:2.53:217,3,0	0/0:26,0:27:48.16:0,48,2482	0/0:14,0:16:10.08:0,10,598	0/0:22,0:26:42.62:0,43,1975	0/0:14,0:18:39.13:0,39,2317	0/0:14,0:15:15.05:0,15,793	0/0:18,0:22:33.17:0,33,1759	0/0:18,0:23:21.07:0,21,1124	0/1:27,2:28:73.39:266,0,73	0/1:26,14:39:99:563,0,530	0/0:17,0:16:20.81:0,21,705	0/0:22,0:24:32.28:0,32,1738	0/0:57,0:57:53.65:0,54,2469	0/0:12,0:18:22.64:0,23,1690	0/0:15,0:15:9.03:0,9,776	0/0:36,0:40:56.84:0,57,5027	0/0:15,0:18:28.70:0,29,1253	0/0:26,0:24:42.14:0,42,1254	0/0:11,0:13:21.07:0,21,1070	0/0:5,0:5:6.02:0,6,186
chr10	67672623	.	C	CT	6192.28	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-16.057;DP=824;FS=0.336;HRun=1;HaplotypeScore=78.2843;InbreedingCoeff=0.9604;MQ=83.08;MQ0=0;MQRankSum=-1.645;QD=40.74;ReadPosRankSum=0.566;VQSLOD=5.2696;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,138,1774	1/1:0,14:14:42.14:630,42,0	0/0:20,0:21:54.12:0,54,647	0/0:30,0:30:58.39:0,58,845	0/0:29,0:29:84.27:0,84,1091	0/0:25,0:25:72.23:0,72,935	0/0:32,0:32:90.28:0,90,1155	1/1:0,28:28:81.27:1214,81,0	1/1:3,29:32:81.27:1214,81,0	0/0:28,0:28:84.26:0,84,1066	0/0:21,0:21:63.18:0,63,790	0/0:30,0:30:90.28:0,90,1153	0/0:37,0:37:99:0,111,1441	0/0:28,0:28:78.25:0,78,1012	0/0:40,0:40:99:0,111,1410	0/0:37,0:37:99:0,108,1402	1/1:0,47:47:99:1999,135,0	1/1:3,28:31:78.22:1136,78,0	0/0:35,0:35:99:0,102,1284	0/0:25,0:25:72.22:0,72,921	0/0:44,0:44:99:0,126,1636	0/0:29,0:29:81.25:0,81,1038	0/0:16,0:16:48.16:0,48,622	0/0:40,0:40:99:0,105,1344	0/0:23,0:23:69.22:0,69,896	0/0:29,0:29:78.25:0,78,1013	0/0:23,0:21:69.22:0,69,896	0/0:1,0:1:3.01:0,3,39
chr10	67673907	.	G	GC	2214.54	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-8.544;DP=565;FS=1.033;HRun=6;HaplotypeScore=65.1125;InbreedingCoeff=0.9815;MQ=82.88;MQ0=0;MQRankSum=-3.112;QD=27.34;ReadPosRankSum=2.321;VQSLOD=4.2709;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,117,1169	0/0:4,0:4:9.02:0,9,92	0/0:22,0:22:50.72:0,51,455	0/0:13,0:13:32.21:0,32,296	0/0:23,0:23:66.15:0,66,673	0/0:15,0:15:39.07:0,39,392	0/0:22,0:22:60.14:0,60,612	0/0:21,0:21:54.09:0,54,532	0/0:20,0:20:57.11:0,57,575	0/0:22,0:22:58:0,58,580	0/0:16,0:16:48.09:0,48,481	0/0:12,0:12:33.07:0,33,337	1/1:3,21:24:56.79:715,57,0	0/0:18,0:18:51.11:0,51,520	0/0:22,0:22:60.12:0,60,605	0/0:13,0:13:39.09:0,39,398	0/0:24,0:24:69.16:0,69,704	0/0:26,0:26:69.14:0,69,696	0/0:19,0:18:51.10:0,51,513	0/0:18,0:18:54.10:0,54,539	0/0:34,0:34:90.20:0,90,918	1/1:2,15:18:33.11:415,33,0	1/1:1,19:20:48.15:603,48,0	1/1:2,17:19:51.16:642,51,0	0/0:22,0:22:63.13:0,63,636	0/0:27,0:27:63.13:0,63,643	0/0:23,0:23:69.13:0,69,690	0/0:6,0:6:18.04:0,18,184
chr10	67674000	.	GC	G	1316.11	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=2.568;DP=578;FS=1.843;HRun=7;HaplotypeScore=85.1403;InbreedingCoeff=0.9302;MQ=78.18;MQ0=1;MQRankSum=-1.004;QD=23.93;ReadPosRankSum=1.354;VQSLOD=4.0786;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,28:32:78.17:796,78,0	0/0:6,0:6:12.03:0,12,139	0/0:24,0:23:43.29:0,43,501	0/0:22,0:21:28.36:0,28,429	1/1:2,21:23:63.14:642,63,0	0/0:17,0:17:42.13:0,42,528	0/0:22,0:22:63.19:0,63,778	0/0:26,0:26:45.12:0,45,519	0/0:24,0:24:63.18:0,63,732	0/0:18,0:18:48.15:0,48,603	0/0:15,0:15:42.13:0,42,527	0/0:23,0:23:63.74:0,64,754	0/0:22,0:22:60.19:0,60,753	0/0:22,0:22:66.20:0,66,816	0/0:19,0:19:48.15:0,48,603	0/0:12,0:12:36.12:0,36,453	0/0:28,0:28:73.13:0,73,855	0/0:23,0:23:51.15:0,51,610	0/0:20,0:20:51.15:0,51,626	0/0:11,0:11:27.53:0,28,314	0/0:37,1:38:74.71:0,75,1239	0/0:22,0:22:60.19:0,60,752	0/0:13,0:13:39.12:0,39,491	0/0:22,0:22:66.21:0,66,828	0/0:16,0:16:33.11:0,33,415	0/0:1,0:18:44.86:0,45,226	0/0:36,0:36:99:0,99,1243	0/0:0,0:4:5.68:0,6,29
chr10	67674013	.	C	CATA	5238.91	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=7.416;DP=589;FS=9.551;HRun=0;HaplotypeScore=99.0580;InbreedingCoeff=0.9728;MQ=82.44;MQ0=1;MQRankSum=-5.093;QD=55.73;ReadPosRankSum=2.172;VQSLOD=7.0233;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,108,1933	1/1:0,3:3:9.03:207,9,0	0/0:26,0:25:58.57:0,59,953	0/0:26,0:25:65.02:0,65,970	0/0:23,0:23:69.24:0,69,1279	0/0:17,0:17:51.17:0,51,919	0/0:21,0:21:63.21:0,63,1145	1/1:3,11:18:42.11:823,42,0	1/1:3,17:21:54.18:1224,54,0	0/0:19,0:19:57.20:0,57,1058	0/0:17,0:17:48.16:0,48,874	0/0:19,0:19:54.17:0,54,975	0/0:18,0:18:54.14:0,54,970	0/0:25,0:25:72.20:0,72,1302	0/0:17,0:17:51.16:0,51,919	0/0:14,0:14:42.14:0,42,775	1/1:1,27:28:78.27:1764,78,0	1/1:0,23:24:54.19:1221,54,0	0/0:19,0:19:54.18:0,54,959	0/0:12,0:12:33.56:0,34,549	0/0:44,0:44:99:0,126,2236	0/0:25,0:25:69.23:0,69,1238	0/0:18,0:18:51.17:0,51,945	0/0:24,0:24:72.24:0,72,1303	0/0:14,0:14:42.14:0,42,745	0/0:19,0:19:57.18:0,57,1028	0/0:35,0:35:99:0,102,1838	0/0:4,0:4:9.02:0,9,138
chr10	67674940	.	C	CAA	2373.05	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=-3.928;DP=599;FS=18.018;HRun=10;HaplotypeScore=78.3309;InbreedingCoeff=0.8787;MQ=75.77;MQ0=0;MQRankSum=-0.916;QD=22.18;ReadPosRankSum=-2.314;VQSLOD=0.7824;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:49:54.78:0,55,731	1/1:1,8:9:18.02:243,18,0	0/1:10,0:11:14.77:15,0,68	0/0:14,0:15:11.31:0,11,132	0/0:27,0:28:35.61:0,36,337	0/0:20,0:21:35.72:0,36,418	0/0:22,0:22:48.04:0,48,488	1/1:4,22:27:59.62:790,60,0	1/1:1,4:14:22.02:214,22,0	0/0:21,0:22:29.73:0,30,286	0/0:19,0:19:36:0,36,364	0/0:20,0:20:38.97:0,39,383	0/0:17,0:18:26.74:0,27,326	0/0:12,0:13:38.83:0,39,378	0/0:27,0:28:50.75:0,51,571	0/0:31,0:31:43.95:0,44,639	1/1:0,17:20:41.10:519,41,0	1/1:3,22:26:53.67:770,54,0	0/0:15,0:16:26.77:0,27,327	0/0:17,0:17:26.97:0,27,261	0/0:22,0:25:29.01:0,29,480	0/0:20,0:20:23.84:0,24,244	0/0:13,0:13:27.03:0,27,274	0/0:18,0:19:44.83:0,45,510	0/0:25,0:25:41.91:0,42,421	0/0:27,0:27:56.94:0,57,563	0/0:28,0:29:74.83:0,75,744	0/0:12,0:13:32.77:0,33,317
chr10	67677487	.	T	TC	1252.90	PASS	AB=0.884;AC=42;AF=0.750;AN=56;BaseQRankSum=-1.657;DP=332;FS=4.424;HRun=11;HaplotypeScore=48.4151;InbreedingCoeff=0.3503;MQ=79.64;MQ0=0;MQRankSum=-2.723;QD=4.22;ReadPosRankSum=-2.309;VQSLOD=-0.0713;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:18,1:22:2.54:3,0,145	1/1:1,0:2:2.84:14,3,0	0/1:13,0:13:0.92:1,0,45	0/0:15,0:16:26.03:0,26,179	0/0:8,0:9:10.82:0,11,75	1/1:7,0:9:13.18:90,13,0	0/1:18,0:19:5.92:79,0,6	1/1:13,0:13:5.82:36,6,0	1/1:8,0:8:8.41:63,8,0	1/1:5,0:7:2.99:23,3,0	1/1:8,1:9:7.04:36,7,0	0/1:6,5:11:0:0,0,0	1/1:10,0:10:9.87:76,10,0	1/1:10,0:10:19.22:151,19,0	1/1:17,0:17:19.65:127,20,0	1/1:6,0:12:7.05:37,7,0	1/1:17,0:17:23.89:180,24,0	1/1:9,0:9:10.39:56,10,0	1/1:12,0:12:8.66:59,9,0	1/1:4,2:6:5.97:50,6,0	0/1:24,1:26:7.26:69,0,7	0/1:10,0:10:0:0,0,0	1/1:8,0:8:3:25,3,0	0/1:2,9:11:0.70:25,0,1	1/1:9,1:10:12.47:108,12,0	0/0:10,0:10:11.92:0,12,90	1/1:14,2:16:12.06:81,12,0	0/1:10,0:10:15.77:16,0,36
chr10	67678005	.	A	AGTGTGTGT	9942.46	PASS	AB=0.864;AC=37;AF=0.685;AN=54;BaseQRankSum=-8.528;DP=658;FS=12.073;HRun=0;HaplotypeScore=185.1543;InbreedingCoeff=0.7379;MQ=59.05;MQ0=15;MQRankSum=-7.598;QD=23.84;ReadPosRankSum=-4.152;VQSLOD=2.5060;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:30,11:46:24.08:888,24,0	./.	0/0:39,0:18:3.47:0,3,30	0/0:34,0:16:2.94:0,3,68	1/1:16,8:28:23.98:720,24,0	1/1:10,5:16:24.08:890,24,0	1/1:10,12:27:27.09:1027,27,0	1/1:17,0:15:24.05:399,24,0	1/1:10,0:9:3.01:70,3,0	1/1:11,7:20:33.11:983,33,0	0/1:16,0:19:5.46:161,0,5	1/1:11,5:18:3.01:123,3,0	0/0:10,0:29:42.14:0,42,777	1/1:13,1:14:6.02:238,6,0	1/1:13,2:23:8.57:305,9,0	1/1:10,4:16:14.86:435,15,0	1/1:25,0:25:17.34:357,17,0	1/1:14,0:13:15.05:304,15,0	1/1:21,0:27:23.33:397,23,0	1/1:11,8:22:21.07:723,21,0	1/1:17,7:29:14.94:564,15,0	0/0:10,0:28:46.70:0,47,738	0/0:12,0:25:30.29:0,30,510	0/0:8,0:29:48.16:0,48,893	1/1:17,0:17:15.03:316,15,0	0/0:19,0:35:1.21:0,1,557	1/1:17,8:26:26.83:1041,27,0	0/0:8,0:14:17.52:0,18,154
chr10	67678604	.	AGTGTGTGTGTGTGT	A	1317.09	PASS	AB=0.777;AC=6;AF=0.107;AN=56;BaseQRankSum=5.252;DP=669;FS=5.697;HRun=0;HaplotypeScore=238.0825;InbreedingCoeff=0.4781;MQ=64.79;MQ0=15;MQRankSum=-4.908;QD=12.91;ReadPosRankSum=0.741;VQSLOD=1.6000;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:39:24.03:0,24,620	0/0:8,0:8:9.03:0,9,363	0/0:25,0:14:3.01:0,3,72	0/0:31,0:15:0.47:0,0,1	0/1:15,0:16:5.60:6,0,274	0/0:26,0:25:33.11:0,33,1727	0/0:26,0:29:36.12:0,36,1669	0/0:24,0:23:24.08:0,24,980	0/0:10,0:21:11.97:0,12,176	0/0:25,0:25:36.11:0,36,1653	0/0:14,0:13:9.03:0,9,546	0/0:35,0:34:51.17:0,51,2843	1/1:15,19:34:21.07:743,21,0	0/0:20,0:20:33.11:0,33,1713	0/0:31,0:33:27.09:0,27,1605	0/0:20,0:22:33.11:0,33,1798	0/0:22,0:24:36.08:0,36,1824	0/0:23,0:23:43.93:0,44,2209	0/0:30,0:28:22.61:0,23,1014	0/0:8,0:8:3.01:0,3,183	0/0:54,0:55:66.16:0,66,3129	1/1:13,8:22:8.99:235,9,0	0/0:7,7:12:0:0,0,0	0/1:14,15:29:74.22:456,0,74	0/0:17,0:15:21.07:0,21,1051	0/0:17,0:16:18.06:0,18,976	0/0:9,0:9:6.02:0,6,379	0/0:14,0:14:9.49:0,9,240
chr10	67678608	.	T	TGA	2761.65	PASS	AB=0.890;AC=15;AF=0.268;AN=56;BaseQRankSum=-9.358;DP=663;FS=20.492;HRun=0;HaplotypeScore=117.1979;InbreedingCoeff=-0.3348;MQ=60.80;MQ0=16;MQRankSum=2.588;QD=7.65;ReadPosRankSum=1.823;VQSLOD=2.0190;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:53.37:0,53,416	0/0:9,0:9:20.18:0,20,153	0/0:21,0:10:27.05:0,27,283	0/0:30,0:14:32.22:0,32,367	0/0:19,0:18:26.39:0,26,203	0/1:23,0:22:56.69:170,0,57	0/1:27,0:27:22.94:240,0,23	0/0:26,0:25:65.36:0,65,492	0/0:20,0:20:20.68:0,21,155	0/1:25,0:25:62.49:253,0,62	0/1:14,0:13:33.32:33,0,41	0/1:34,0:32:63.98:218,0,64	0/0:31,0:31:44.58:0,45,330	0/1:23,0:23:94.19:143,0,94	0/1:11,22:33:86.49:86,0,116	0/1:22,0:22:32.19:191,0,32	0/0:26,0:26:68.74:0,69,631	0/0:23,0:23:62.60:0,63,616	0/1:10,19:27:25.84:434,0,26	0/1:10,0:10:8.56:83,0,9	0/1:59,0:57:99:548,0,150	0/0:19,0:19:14.93:0,15,116	0/0:15,0:12:5.99:0,6,49	0/0:28,0:28:32.80:0,33,247	0/1:20,0:18:65.81:97,0,66	0/1:5,12:16:47.81:286,0,48	0/1:9,0:9:7.74:91,0,8	0/1:5,10:15:44.40:44,0,45
chr10	67678792	.	T	TGCTACTTTTTTCCTGTCCCTT	2556.53	PASS	AB=0.707;AC=22;AF=0.917;AN=24;BaseQRankSum=-2.228;DP=37;FS=11.729;HRun=0;HaplotypeScore=29.3628;InbreedingCoeff=-0.2364;MQ=148.77;MQ0=0;MQRankSum=-0.966;QD=85.22;ReadPosRankSum=-0.891;VQSLOD=1.1709;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	1/1:1,0:1:3.01:231,3,0	0/1:4,0:7:36.02:727,0,36	0/1:3,1:5:16.26:709,0,16	1/1:1,0:1:3.01:62,3,0	1/1:3,0:3:9.03:194,9,0	1/1:1,0:1:3.01:46,3,0	1/1:2,0:2:3:26,3,0	./.	./.	./.	./.	./.	./.	1/1:2,0:2:6.02:117,6,0	./.	./.	./.	./.	./.	1/1:4,0:4:8.98:95,9,0	./.	1/1:1,0:1:3.01:48,3,0	./.	./.	1/1:2,0:2:6.02:213,6,0	1/1:1,0:1:3.01:174,3,0	./.
chr10	67679378	.	GA	G	6529.91	PASS	AB=0.837;AC=52;AF=0.929;AN=56;BaseQRankSum=-3.885;DP=505;FS=24.975;HRun=9;HaplotypeScore=106.4166;InbreedingCoeff=0.2769;MQ=51.54;MQ0=13;MQRankSum=0.453;QD=13.25;ReadPosRankSum=2.990;VQSLOD=3.0747;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,26:30:66.03:602,66,0	1/1:8,4:11:26.93:240,27,0	0/0:12,0:3:3.62:0,4,12	0/1:17,0:8:7.52:11,0,8	1/1:11,20:32:21.16:329,21,0	1/1:3,7:10:8.51:82,9,0	1/1:8,14:20:41.80:377,42,0	1/1:3,11:14:21.01:193,21,0	1/1:9,6:15:23.99:215,24,0	1/1:7,16:23:23.46:374,23,0	1/1:3,8:11:11.74:110,12,0	1/1:12,6:18:6.56:102,7,0	1/1:8,10:18:26.91:245,27,0	1/1:8,7:14:11.90:109,12,0	1/1:11,10:21:26.94:246,27,0	1/1:6,5:11:9.36:124,9,0	1/1:25,13:34:62.92:619,63,0	1/1:14,5:18:38.89:330,39,0	1/1:8,11:18:26.76:297,27,0	1/1:8,8:16:20.92:185,21,0	0/1:5,3:6:23.01:45,0,23	1/1:5,9:14:23.98:214,24,0	1/1:14,10:22:42:377,42,0	1/1:16,9:24:41.93:367,42,0	1/1:10,8:16:17.58:160,18,0	1/1:8,11:18:13.48:276,13,0	1/1:3,13:17:26.81:247,27,0	1/1:1,3:4:5.47:54,5,0
chr10	67679393	.	G	GA	4139.15	PASS	AB=0.962;AC=35;AF=0.625;AN=56;BaseQRankSum=-4.450;DP=595;FS=5.804;HRun=11;HaplotypeScore=130.8224;InbreedingCoeff=0.0995;MQ=59.77;MQ0=10;MQRankSum=-2.760;QD=8.59;ReadPosRankSum=1.999;VQSLOD=2.0720;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:13,2:29:37.61:311,38,0	1/1:7,5:11:22.51:267,23,0	0/0:32,0:14:5.06:0,5,126	0/0:30,0:14:11.59:0,12,78	1/1:23,0:30:32.72:165,33,0	0/1:11,0:11:6.29:6,0,47	0/1:22,0:22:14.83:15,0,40	1/1:11,16:27:15.91:311,16,0	1/1:4,1:20:28.69:162,29,0	0/1:25,2:27:26.74:27,0,80	0/1:10,1:11:33.87:59,0,34	0/1:21,0:21:35.33:35,0,71	1/1:10,12:24:47.80:454,48,0	0/1:17,1:17:16.91:52,0,17	0/1:20,0:20:21.32:21,0,55	0/1:12,0:12:23.61:26,0,24	1/1:34,10:40:19.19:676,19,0	1/1:13,7:21:4.54:369,5,0	0/0:21,0:21:7.86:0,8,79	0/0:18,0:17:7.92:0,8,44	0/0:11,0:9:6.54:0,7,31	1/1:6,5:12:26.89:257,27,0	1/1:15,6:21:9.07:303,9,0	1/1:16,7:22:48.78:449,49,0	0/1:18,0:17:19.31:25,0,19	0/1:20,2:22:0.40:41,0,0	0/1:20,1:21:23.09:23,0,81	1/1:6,1:11:3.14:84,3,0
chr10	67679403	.	AAG	A	1496.57	PASS	AB=0.993;AC=21;AF=0.375;AN=56;BaseQRankSum=-4.312;DP=588;FS=4.260;HRun=0;HaplotypeScore=134.8891;InbreedingCoeff=0.2856;MQ=63.87;MQ0=6;MQRankSum=-4.533;QD=5.61;ReadPosRankSum=-8.830;VQSLOD=0.3926;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:52.59:0,53,661	0/0:13,0:12:36.01:0,36,349	0/0:35,0:17:42.69:0,43,470	0/0:32,0:16:26.43:0,26,218	0/0:23,0:23:13.58:0,14,259	0/1:14,0:14:4.11:113,0,4	0/1:18,0:18:10.21:70,0,10	0/0:30,0:30:44.12:0,44,555	0/0:18,0:18:30.88:0,31,261	0/1:25,0:25:25.75:102,0,26	0/1:14,0:14:4.31:100,0,4	0/1:24,0:24:41.77:44,0,42	0/0:20,0:20:51.03:0,51,445	1/1:19,0:18:1.91:117,2,0	0/1:15,1:16:28.80:29,0,37	0/1:11,0:11:26.27:37,0,26	0/0:38,0:37:82.82:0,83,947	0/0:23,0:22:62.97:0,63,608	0/1:21,0:21:12.43:202,0,12	1/1:18,0:17:9.64:172,10,0	1/1:11,1:11:3.11:151,3,0	0/0:14,0:14:35.94:0,36,316	0/0:17,0:17:41.57:0,42,390	0/0:23,0:22:54.61:0,55,482	1/1:19,1:18:21.35:220,21,0	1/1:22,0:22:11.73:115,12,0	0/1:21,0:21:39.76:84,0,40	1/1:11,1:12:9.74:123,10,0
chr10	67679404	.	AG	A	3470.31	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-2.954;DP=568;FS=15.717;HRun=1;HaplotypeScore=117.4329;InbreedingCoeff=0.9948;MQ=64.92;MQ0=5;MQRankSum=-4.208;QD=13.50;ReadPosRankSum=-5.798;VQSLOD=0.3610;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:33.12:0,33,453	0/0:13,0:12:34.37:0,34,208	0/0:35,0:17:27.61:0,28,374	0/0:32,0:16:24.73:0,25,167	0/0:21,0:21:15.66:0,16,199	1/1:14,0:14:26.51:217,27,0	1/1:13,2:15:36.39:259,36,0	0/0:30,0:30:40.62:0,41,395	0/0:18,0:18:22.08:0,22,138	1/1:23,1:24:40.85:211,41,0	1/1:13,0:13:29.73:200,30,0	1/1:22,1:23:47.45:274,47,0	0/0:19,0:19:38.47:0,38,243	1/1:16,3:18:41.01:283,41,0	1/1:14,1:15:29.34:191,29,0	1/1:9,1:10:16.82:126,17,0	0/0:37,0:37:64.58:0,65,579	0/0:23,0:22:61.04:0,61,401	1/1:19,1:20:44.40:354,44,0	1/1:14,4:17:34.61:272,35,0	1/1:10,1:10:23.55:173,24,0	0/0:12,0:12:34.78:0,35,207	0/0:15,0:16:31.95:0,32,222	0/0:21,0:21:51.01:0,51,297	1/1:19,1:18:45.85:316,46,0	1/1:22,1:23:38.88:228,39,0	1/1:20,0:20:30.73:177,31,0	1/1:11,1:12:26.95:191,27,0
chr10	67679444	.	AG	A	591.94	PASS	AB=0.548;AC=3;AF=0.054;AN=56;BaseQRankSum=2.857;DP=514;FS=9.081;HRun=3;HaplotypeScore=76.6509;InbreedingCoeff=0.6349;MQ=81.85;MQ0=0;MQRankSum=-0.020;QD=24.66;ReadPosRankSum=1.570;VQSLOD=2.2783;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:96.28:0,96,1357	0/0:9,0:9:27.09:0,27,388	0/0:13,1:15:27.06:0,27,444	0/0:22,0:22:50.10:0,50,816	0/0:25,0:25:72.24:0,72,1033	0/0:10,0:10:27.09:0,27,389	0/0:15,0:15:39.12:0,39,543	0/0:26,0:26:63.21:0,63,907	0/0:17,0:17:39.12:0,39,543	0/0:18,0:18:51.17:0,51,734	0/0:12,0:12:36.12:0,36,518	0/0:13,0:13:39.13:0,39,558	0/0:17,0:17:51.17:0,51,724	0/0:15,0:15:42.05:0,42,542	0/0:16,0:16:48.16:0,48,690	0/0:14,0:14:42.14:0,42,605	0/0:40,0:40:99:0,117,1682	0/0:28,0:27:78.26:0,78,1121	0/0:24,0:24:66.21:0,66,933	0/0:6,0:6:18.06:0,18,259	0/0:27,0:27:78.24:0,78,1086	0/0:16,0:16:45.15:0,45,648	0/0:12,0:12:36.12:0,36,518	0/0:27,0:27:78.24:0,78,1099	0/0:11,0:11:27.09:0,27,389	0/1:3,14:17:38.27:472,0,38	0/0:19,0:19:54.17:0,54,760	1/1:0,7:7:18.06:223,18,0
chr10	67681156	.	CTCCAGATGAAGAAGATGCAGA	C	72.60	PASS	AB=0.831;AC=2;AF=0.036;AN=56;BaseQRankSum=4.081;DP=422;FS=6.502;HRun=0;HaplotypeScore=221.2001;InbreedingCoeff=-0.0428;MQ=55.10;MQ0=4;MQRankSum=1.071;QD=1.69;ReadPosRankSum=-3.714;VQSLOD=1.4904;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:33.58:0,34,2244	0/0:6,0:6:18.06:0,18,1236	0/0:20,0:20:57.20:0,57,3644	0/0:21,0:18:54.16:0,54,3676	0/0:13,0:13:33.58:0,34,1893	0/0:14,0:13:36.12:0,36,2937	0/0:16,0:15:45.15:0,45,3277	0/1:28,3:28:53.67:54,0,3850	0/0:16,0:15:45.14:0,45,3502	0/0:26,0:26:78.26:0,78,6527	0/0:15,0:15:45.15:0,45,2567	0/0:22,0:22:66.23:0,66,4041	0/0:14,0:14:39.13:0,39,3290	0/0:7,0:7:21.07:0,21,1500	0/0:15,0:15:36.04:0,36,2860	0/0:12,0:12:36.12:0,36,2853	0/0:15,0:15:36.12:0,36,2317	0/0:9,0:9:21.03:0,21,1432	0/1:8,4:10:99:108,0,1200	0/0:20,0:20:60.21:0,60,3839	0/0:3,0:3:6.02:0,6,348	0/0:23,0:23:63.22:0,63,4471	0/0:12,0:12:33.11:0,33,2590	0/0:7,0:7:12.04:0,12,614	0/0:21,0:21:63.22:0,63,4966	0/0:13,0:12:36.12:0,36,2837	0/0:17,0:17:51.18:0,51,3848	0/0:7,0:7:21.07:0,21,1709
chr10	67681468	.	G	GCA	31363.08	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-8.764;DP=751;FS=2.132;HRun=0;HaplotypeScore=76.1846;InbreedingCoeff=0.9991;MQ=82.22;MQ0=3;MQRankSum=-9.350;QD=44.55;ReadPosRankSum=5.468;VQSLOD=6.2587;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,25:34:69.24:1224,69,0	1/1:1,10:11:30.10:531,30,0	0/0:16,0:16:36.08:0,36,448	0/0:31,0:31:75.24:0,75,1002	1/1:0,11:11:30.10:532,30,0	1/1:0,25:25:75.26:1330,75,0	1/1:2,34:36:93.05:1650,93,0	1/1:4,29:35:90.29:1556,90,0	1/1:2,25:27:66.23:1168,66,0	1/1:3,27:31:87.27:1484,87,0	1/1:1,15:16:45.15:796,45,0	1/1:3,39:42:99:1968,111,0	1/1:8,25:34:75.02:1325,75,0	1/1:4,31:35:81.28:1437,81,0	1/1:2,29:33:74.85:1330,75,0	1/1:4,26:29:66.23:1171,66,0	1/1:2,25:27:75.24:1300,75,0	1/1:0,17:17:51.17:905,51,0	1/1:4,21:25:66.18:1137,66,0	1/1:1,14:15:39.13:691,39,0	1/1:2,50:51:99:2449,138,0	1/1:1,25:26:66.23:1166,66,0	1/1:0,14:16:38.94:689,39,0	1/1:4,26:31:63.22:1118,63,0	1/1:2,22:24:66.23:1169,66,0	1/1:2,36:38:99:1916,108,0	1/1:3,18:21:45.15:787,45,0	1/1:0,11:11:30.10:532,30,0
chr10	67684705	.	A	AC	2746.74	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-7.101;DP=753;FS=19.064;HRun=1;HaplotypeScore=70.3030;InbreedingCoeff=0.9973;MQ=69.66;MQ0=0;MQRankSum=-2.304;QD=39.24;ReadPosRankSum=2.504;VQSLOD=1.9351;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,53:53:99:2200,147,0	0/0:15,0:15:42.12:0,42,529	0/0:11,0:11:28.63:0,29,338	0/0:7,0:7:21:0,21,222	1/1:0,17:17:45.15:669,45,0	0/0:23,0:23:66.20:0,66,840	0/0:42,0:42:99:0,123,1550	0/0:32,0:32:90.13:0,90,1106	0/0:26,0:26:78.25:0,78,1006	0/0:14,0:14:42.13:0,42,534	0/0:15,0:15:42.14:0,42,545	0/0:52,0:52:99:0,153,1961	0/0:28,0:28:78.25:0,78,1009	0/0:33,0:33:99:0,99,1242	0/0:39,0:39:99:0,105,1310	0/0:37,0:37:99:0,111,1397	0/0:25,0:25:75.23:0,75,956	0/0:35,0:35:99:0,99,1246	0/0:26,0:26:63.14:0,63,779	0/0:13,0:13:33.11:0,33,428	0/0:64,0:64:99:0,180,2238	0/0:18,0:18:51.13:0,51,630	0/0:14,0:14:42.14:0,42,542	0/0:45,0:45:99:0,129,1649	0/0:19,0:19:56.75:0,57,693	0/0:16,0:16:45.14:0,45,565	0/0:20,0:20:60.18:0,60,753	0/0:14,0:14:42.14:0,42,545
chr10	67686435	.	TA	T	2071.23	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=9.124;DP=728;FS=1.614;HRun=4;HaplotypeScore=72.7014;InbreedingCoeff=0.9994;MQ=95.50;MQ0=0;MQRankSum=-1.684;QD=25.26;ReadPosRankSum=3.360;VQSLOD=2.5561;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:99:0,99,1365	0/0:8,0:8:24.08:0,24,336	0/0:27,0:27:69.18:0,69,914	0/0:42,0:41:99:0,102,1334	0/0:33,0:33:93.31:0,93,1299	0/0:25,0:25:66.22:0,66,924	0/0:27,0:27:78.25:0,78,1075	0/0:43,0:43:99:0,123,1664	0/0:25,0:25:75.19:0,75,997	0/0:34,0:34:99:0,99,1359	0/0:20,0:20:60.20:0,60,831	0/0:30,0:30:87.28:0,87,1202	1/1:3,17:20:51.16:612,51,0	0/0:27,0:27:78.24:0,78,1051	0/0:26,0:26:78.25:0,78,1075	0/0:24,0:24:66.22:0,66,918	0/0:25,0:25:72.23:0,72,991	0/0:27,0:27:78.26:0,78,1092	0/0:19,0:19:57.16:0,57,762	0/0:16,0:16:45.14:0,45,609	0/0:40,0:40:99:0,114,1594	1/1:3,19:22:54.16:648,54,0	1/1:1,21:22:45.07:540,45,0	1/1:1,17:18:35.98:432,36,0	0/0:19,0:19:57.18:0,57,783	0/0:34,0:34:96.32:0,96,1343	0/0:22,0:21:57.16:0,57,776	0/0:20,0:20:60.20:0,60,840
chr10	67687280	.	CAGG	C	2273.85	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=9.170;DP=745;FS=1.175;HRun=0;HaplotypeScore=105.1532;InbreedingCoeff=0.9837;MQ=83.35;MQ0=0;MQRankSum=-4.493;QD=39.20;ReadPosRankSum=4.879;VQSLOD=4.8746;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,57:58:99:2369,141,0	0/0:5,0:5:15.05:0,15,345	0/0:31,0:31:79:0,79,1484	0/0:33,0:33:92.29:0,92,1685	0/0:26,0:26:78.27:0,78,1751	0/0:19,0:19:54.16:0,54,1156	0/0:24,0:24:66.18:0,66,1346	0/0:15,0:15:42.13:0,42,856	0/0:22,0:22:66.20:0,66,1432	0/0:40,0:40:99:0,114,2318	0/0:12,0:12:33.11:0,33,757	0/0:36,0:36:99:0,102,2134	0/0:32,0:32:93.31:0,93,2076	0/0:29,0:29:78.27:0,78,1795	0/0:33,0:33:93.30:0,93,2055	0/0:38,0:38:99:0,108,2374	0/0:23,0:22:66.23:0,66,1496	0/0:11,0:11:30.10:0,30,651	0/0:27,0:27:81.22:0,81,1601	0/0:25,0:25:72.21:0,72,1495	0/0:40,0:40:99:0,111,2382	0/0:26,0:26:75.25:0,75,1682	0/0:20,0:20:54.17:0,54,1161	0/0:26,0:26:75.19:0,75,1544	0/0:30,0:30:90.30:0,90,1959	0/0:25,0:25:72.24:0,72,1589	0/0:24,0:23:72.21:0,72,1521	0/0:15,0:15:42.14:0,42,958
chr10	67688365	.	AGAGAGAGAGAGAGAGTGT	A	5334.97	PASS	AB=1.000;AC=24;AF=0.429;AN=56;BaseQRankSum=-4.470;DP=512;FS=32.333;HRun=0;HaplotypeScore=210.3675;InbreedingCoeff=-0.3257;MQ=61.10;MQ0=16;MQRankSum=1.822;QD=14.34;ReadPosRankSum=-6.512;VQSLOD=0.1093;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:35:32.06:0,32,581	1/1:3,0:3:3.01:137,3,0	0/0:16,0:2:5.90:0,6,42	0/0:38,0:18:22.85:0,23,289	0/0:11,0:10:3.48:0,3,41	0/1:21,0:20:99:437,0,1132	0/1:23,0:23:99:139,0,2286	1/1:23,0:21:63.21:1009,63,0	1/1:3,18:21:12.04:609,12,0	0/1:14,0:13:99:184,0,596	0/0:5,0:5:3.01:0,3,191	0/1:9,0:8:54.30:54,0,321	0/1:11,0:11:99:102,0,1314	0/1:17,0:17:99:217,0,652	0/1:21,0:21:99:125,0,915	0/1:22,0:22:99:204,0,1360	0/1:22,0:22:26.90:569,0,27	1/1:17,0:17:2.80:136,3,0	0/1:17,0:17:60.03:60,0,1704	0/1:15,0:14:99:117,0,544	0/1:22,0:22:99:297,0,584	0/0:14,0:14:5.90:0,6,267	0/0:16,0:16:6.02:0,6,360	0/1:28,0:28:99:280,0,1759	0/1:22,0:22:99:447,0,666	0/1:27,0:26:99:117,0,1849	0/1:17,0:16:94.84:95,0,866	0/0:3,0:2:3.01:0,3,62
chr10	67688369	.	AGAGAGAGAGAGT	A	3832.24	PASS	AB=0.996;AC=28;AF=0.500;AN=56;BaseQRankSum=-1.014;DP=510;FS=35.423;HRun=0;HaplotypeScore=178.3824;InbreedingCoeff=-0.3112;MQ=63.11;MQ0=15;MQRankSum=2.342;QD=9.28;ReadPosRankSum=-4.291;VQSLOD=-0.0536;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:27,2:28:28.34:500,0,28	1/1:3,0:3:3.01:84,3,0	0/0:17,0:2:3.47:0,3,26	0/0:40,0:20:26.51:0,27,247	1/1:2,10:11:5.97:73,6,0	0/1:20,0:19:99:193,0,797	0/1:23,0:23:99:113,0,1488	1/1:24,0:22:65.82:525,66,0	1/1:20,0:20:12.04:338,12,0	0/1:16,0:15:99:192,0,313	0/0:5,0:5:3.01:0,3,125	0/1:10,0:9:69.39:69,0,194	0/1:11,0:11:28.09:28,0,906	0/1:18,0:18:99:137,0,363	0/1:22,0:22:99:109,0,566	0/1:23,0:23:99:144,0,815	1/1:22,0:22:15.01:357,15,0	1/1:17,0:17:3.01:84,3,0	0/1:17,0:17:98.91:99,0,1074	0/1:14,0:13:70.28:70,0,321	0/1:21,0:21:99:199,0,268	0/0:14,0:14:5.93:0,6,146	0/0:15,0:15:6.02:0,6,234	0/1:28,0:28:99:132,0,1080	0/1:20,0:20:99:203,0,424	0/1:26,0:25:99:106,0,743	0/1:17,0:16:77.03:77,0,417	0/0:6,0:5:1.25:0,1,3
chr10	67688375	.	AGAGAGTGT	A	8163.92	PASS	AB=1.000;AC=28;AF=0.500;AN=56;BaseQRankSum=-7.447;DP=514;FS=23.094;HRun=0;HaplotypeScore=143.8408;InbreedingCoeff=-0.3164;MQ=68.40;MQ0=12;MQRankSum=1.595;QD=19.82;ReadPosRankSum=0.565;VQSLOD=2.7530;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:23:22.65:93,0,23	1/1:3,0:3:3.01:67,3,0	0/0:18,0:4:8.75:0,9,102	0/0:38,0:22:34.75:0,35,553	0/0:11,0:10:0.32:0,0,0	0/1:21,0:20:99:483,0,342	0/1:23,0:23:99:345,0,554	1/1:28,0:26:78.26:1246,78,0	1/1:20,0:20:12.04:270,12,0	0/1:16,0:15:91.33:494,0,91	0/0:5,0:5:3.01:0,3,50	0/1:17,0:16:25.62:460,0,26	0/1:12,0:12:99:197,0,333	0/1:20,0:20:99:406,0,124	0/1:21,0:21:99:278,0,181	0/1:24,0:24:99:500,0,272	1/1:21,0:21:15.05:308,15,0	1/1:17,0:17:3.01:67,3,0	0/1:16,0:16:99:314,0,412	0/1:14,0:13:95.22:171,0,95	0/1:23,0:23:26.93:607,0,27	0/0:14,0:14:2.64:0,3,51	0/0:16,0:16:5.99:0,6,73	0/1:28,0:28:99:431,0,290	0/1:20,0:20:99:499,0,139	0/1:23,0:23:93.26:629,0,93	0/1:14,0:13:60.39:212,0,60	1/1:1,6:6:3.01:88,3,0
chr10	67688377	.	AGAGTGT	A	8633.93	PASS	AB=0.964;AC=32;AF=0.571;AN=56;BaseQRankSum=-7.801;DP=516;FS=13.321;HRun=0;HaplotypeScore=131.9547;InbreedingCoeff=-0.1147;MQ=69.39;MQ0=10;MQRankSum=-0.421;QD=20.96;ReadPosRankSum=2.077;VQSLOD=3.7393;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:24,0:23:0.06:67,0,0	1/1:3,0:3:3.01:53,3,0	0/0:19,0:5:11.76:0,12,142	0/0:38,0:22:34.28:0,34,552	0/0:11,0:10:0.45:0,0,1	0/1:21,0:20:99:483,0,161	0/1:24,0:24:99:459,0,287	1/1:28,0:26:78.26:1246,78,0	1/1:20,0:20:12.04:215,12,0	0/1:16,0:16:11.29:547,0,11	0/0:5,0:5:3:0,3,25	1/1:18,0:17:20.55:529,21,0	0/1:13,0:13:99:270,0,146	0/1:21,0:21:40.45:438,0,40	0/1:20,0:20:81:300,0,81	0/1:22,0:22:99:500,0,142	1/1:21,0:21:15.05:252,15,0	1/1:17,0:17:3.01:53,3,0	0/1:16,0:16:99:314,0,169	0/1:15,0:14:23.91:258,0,24	1/1:23,0:23:5.58:640,6,0	0/0:14,0:14:2.65:0,3,41	0/0:17,0:17:3.01:0,3,41	0/1:28,0:28:99:499,0,124	0/1:20,0:20:62.49:499,0,62	0/1:5,16:21:9.16:659,0,9	1/1:15,0:14:5.65:296,6,0	1/1:6,0:6:3.01:55,3,0
chr10	67688379	.	AGTGT	A	9382.58	PASS	AB=0.924;AC=40;AF=0.769;AN=52;BaseQRankSum=-7.770;DP=520;FS=0.000;HRun=0;HaplotypeScore=119.4967;InbreedingCoeff=0.2820;MQ=70.16;MQ0=10;MQRankSum=-1.539;QD=21.82;ReadPosRankSum=0.698;VQSLOD=4.3166;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:25:0.61:39,0,1	1/1:3,0:3:3.01:39,3,0	0/0:19,0:5:11.76:0,12,143	0/0:39,0:23:33.29:0,33,551	0/0:11,0:10:0.47:0,0,1	1/1:21,0:20:15.94:512,16,0	0/1:24,0:25:44.37:583,0,44	1/1:2,26:26:78.26:1246,78,0	1/1:20,0:20:12.04:159,12,0	1/1:15,0:15:33.05:587,33,0	./.	1/1:18,0:17:42.08:606,42,0	0/1:13,0:13:11.01:307,0,11	1/1:23,0:23:12.56:545,13,0	1/1:21,0:21:2.55:352,3,0	0/1:22,0:22:11.03:505,0,11	1/1:21,0:21:15.05:196,15,0	1/1:17,0:17:3.01:39,3,0	0/1:15,0:15:5.09:354,0,5	1/1:15,0:14:7.95:317,8,0	1/1:24,0:24:48.16:774,48,0	0/1:4,9:14:0:0,0,0	./.	1/1:26,0:26:19.85:551,20,0	1/1:21,0:21:20.66:573,21,0	1/1:21,0:21:46.39:695,46,0	1/1:15,0:14:26.86:364,27,0	1/1:6,0:6:3.01:41,3,0
chr10	67692074	.	T	TTA	4901.61	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-3.677;DP=631;FS=0.838;HRun=0;HaplotypeScore=124.0226;InbreedingCoeff=0.9956;MQ=74.02;MQ0=1;MQRankSum=-10.141;QD=46.68;ReadPosRankSum=-1.518;VQSLOD=5.2671;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:63.13:0,63,867	1/1:2,12:14:42.12:770,42,0	0/0:24,0:18:19.62:0,20,268	0/0:21,0:14:16.61:0,17,208	0/0:28,0:28:81.21:0,81,1192	0/0:25,0:25:72.11:0,72,958	0/0:20,0:21:54.15:0,54,804	1/1:15,12:27:69.07:1137,69,0	1/1:12,17:28:76.02:1263,76,0	0/0:25,0:25:72.17:0,72,997	0/0:15,0:15:45.14:0,45,705	0/0:21,0:21:60.16:0,60,881	0/0:21,0:21:63.17:0,63,967	0/0:21,0:21:54.16:0,54,829	0/0:29,0:29:84.23:0,84,1226	0/0:18,0:18:51.14:0,51,754	1/1:4,15:19:54.08:935,54,0	1/1:5,11:16:45.09:797,45,0	0/0:21,0:21:63.18:0,63,962	0/0:23,0:23:66.18:0,66,1014	0/0:19,0:19:51.14:0,51,777	0/0:26,0:26:75.19:0,75,1097	0/0:25,0:25:69.05:0,69,955	0/0:28,0:28:75.12:0,75,1042	0/0:24,0:24:60.17:0,60,885	0/0:31,0:31:90.23:0,90,1281	0/0:28,0:28:81.15:0,81,1108	0/0:8,0:8:24.08:0,24,381
chr10	67692096	.	G	GT	19024.39	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-8.051;DP=644;FS=2.624;HRun=5;HaplotypeScore=75.8493;InbreedingCoeff=0.9966;MQ=71.73;MQ0=3;MQRankSum=-4.267;QD=32.74;ReadPosRankSum=5.864;VQSLOD=4.8904;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,23:23:60.20:789,60,0	1/1:2,9:11:27.09:355,27,0	0/0:39,0:23:50.37:0,50,439	0/0:24,0:13:27.05:0,27,282	1/1:3,19:22:54.18:710,54,0	1/1:0,26:26:69.22:908,69,0	1/1:3,21:24:51.17:671,51,0	1/1:6,32:37:99:1248,99,0	1/1:3,22:25:57.12:728,57,0	1/1:1,22:23:63.20:829,63,0	1/1:3,13:16:39.13:513,39,0	1/1:2,21:23:62.79:798,63,0	1/1:2,21:23:63.20:829,63,0	1/1:1,21:22:57.19:750,57,0	1/1:1,25:26:72.23:947,72,0	1/1:1,16:17:39.13:513,39,0	1/1:5,16:21:54.12:676,54,0	1/1:1,12:13:33.11:434,33,0	1/1:4,23:27:69.22:895,69,0	1/1:1,26:27:72.19:928,72,0	1/1:3,14:17:39.13:513,39,0	1/1:3,19:22:48.16:632,48,0	1/1:1,16:17:45.15:589,45,0	1/1:1,25:26:66.21:868,66,0	1/1:4,23:27:57.16:734,57,0	1/1:2,26:28:78.25:1024,78,0	1/1:1,24:25:66.21:868,66,0	1/1:5,7:12:21.07:276,21,0
chr10	67693044	.	C	CTTCTGTGGAGGATCTGT	23613.27	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=1.771;DP=690;FS=11.823;HRun=0;HaplotypeScore=297.6759;InbreedingCoeff=0.9990;MQ=78.23;MQ0=0;MQRankSum=-16.126;QD=173.63;ReadPosRankSum=-1.705;VQSLOD=3.5741;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,99,4440	1/1:10,4:14:39.10:2698,39,0	0/0:23,0:24:66.22:0,66,2364	0/0:17,0:18:51.14:0,51,2029	0/0:28,0:28:75.24:0,75,3262	0/0:24,0:24:66.23:0,66,2912	0/0:21,0:21:57.19:0,57,2527	1/1:47,0:47:99:6774,126,0	1/1:15,15:30:84.29:6126,84,0	0/0:29,0:29:84.29:0,84,3801	0/0:17,0:17:45.15:0,45,2180	0/0:15,0:15:42.13:0,42,1818	0/0:31,0:31:90.31:0,90,4174	0/0:23,0:23:66.23:0,66,2971	0/0:31,0:31:87.28:0,87,3902	0/0:30,0:30:87.27:0,87,3645	1/1:14,10:28:60.21:4579,60,0	1/1:12,4:17:45.15:3437,45,0	0/0:17,0:17:45.15:0,45,1800	0/0:34,0:34:96.33:0,96,4681	0/0:21,0:21:63.20:0,63,2823	0/0:25,0:25:72.23:0,72,3127	0/0:24,0:24:69.24:0,69,3127	0/0:34,0:34:96.33:0,96,4566	0/0:22,0:22:63.18:0,63,2822	0/0:29,0:29:87.29:0,87,3939	0/0:16,0:16:48.16:0,48,2292	0/0:7,0:7:21.07:0,21,1012
chr10	67694279	.	GC	G	1553.22	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.034;DP=625;FS=10.529;HRun=6;HaplotypeScore=59.3652;InbreedingCoeff=0.9867;MQ=73.54;MQ0=0;MQRankSum=-4.140;QD=25.89;ReadPosRankSum=1.378;VQSLOD=3.3864;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,35:36:96.24:1031,96,0	0/0:13,0:13:39.10:0,39,495	0/0:11,0:11:27.02:0,27,275	0/0:12,0:12:13.11:0,13,197	1/1:4,20:24:60.15:643,60,0	0/0:20,0:20:48.10:0,48,610	0/0:29,0:29:81.22:0,81,1021	0/0:27,0:27:75.24:0,75,970	0/0:26,0:26:72.17:0,72,909	0/0:21,0:21:63.20:0,63,811	0/0:19,0:19:57.16:0,57,716	0/0:35,0:35:99:0,105,1324	0/0:17,0:17:51.15:0,51,655	0/0:26,0:26:72.19:0,72,914	0/0:33,0:33:99:0,99,1241	0/0:18,0:18:54.18:0,54,711	0/0:29,0:29:81.25:0,81,1050	0/0:19,0:19:51.17:0,51,671	0/0:22,0:22:63.18:0,63,791	0/0:12,0:12:36.12:0,36,473	0/0:26,0:26:72.20:0,72,915	0/0:25,0:25:72.23:0,72,946	0/0:10,0:10:30.10:0,30,390	0/0:29,0:29:84.25:0,84,1088	0/0:18,0:18:48.13:0,48,614	0/0:31,0:31:93.24:0,93,1178	0/0:24,0:24:72.22:0,72,929	0/0:13,0:13:39.13:0,39,513
chr10	67696848	.	CTT	C	5722.82	PASS	AB=0.617;AC=18;AF=0.321;AN=56;BaseQRankSum=14.813;DP=476;FS=190.500;HRun=2;HaplotypeScore=89.8329;InbreedingCoeff=-0.3090;MQ=66.19;MQ0=7;MQRankSum=-12.992;QD=22.10;ReadPosRankSum=2.484;VQSLOD=0.6398;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:3,12:15:82.86:369,0,83	0/0:11,0:11:33.03:0,33,543	0/0:13,0:12:33.11:0,33,625	0/0:19,0:16:45.15:0,45,863	0/1:13,10:22:99:163,0,451	0/1:2,14:16:21.85:501,0,22	1/1:2,13:14:27.09:440,27,0	0/0:22,0:22:66.23:0,66,1255	0/0:23,0:23:63:0,63,1210	0/1:4,6:10:99:260,0,202	0/1:7,11:18:99:285,0,309	0/1:4,8:12:99:205,0,205	0/0:20,0:20:57.19:0,57,1083	0/1:1,12:13:24.86:455,0,25	0/1:3,10:13:82.89:378,0,83	0/1:4,10:14:99:449,0,135	0/0:21,0:21:63.22:0,63,1216	0/0:26,0:26:75.26:0,75,1440	0/1:8,5:12:99:208,0,370	0/1:10,9:19:99:360,0,477	0/1:3,7:9:39.92:40,0,107	0/0:17,0:17:51.17:0,51,986	0/0:27,0:26:78.27:0,78,1459	0/0:18,0:17:48.16:0,48,927	0/1:6,8:12:99:312,0,144	0/1:8,15:23:99:656,0,376	0/1:7,8:15:99:386,0,211	0/1:9,7:15:99:254,0,366
chr10	67697712	.	T	TGA	524.64	PASS	AB=1.000;AC=24;AF=0.706;AN=34;BaseQRankSum=-2.460;DP=147;FS=0.000;HRun=0;HaplotypeScore=19.4737;InbreedingCoeff=0.1360;MQ=73.93;MQ0=34;MQRankSum=0.183;QD=7.29;ReadPosRankSum=-3.435;VQSLOD=2.1345;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:2:1.25:0,1,3	1/1:2,0:1:3.01:47,3,0	0/0:33,0:7:5.57:0,6,62	0/1:38,0:7:10.37:16,0,10	1/1:1,0:1:2.99:23,3,0	./.	1/1:2,0:1:3.01:47,3,0	0/1:5,0:4:14.81:15,0,116	1/1:2,0:2:6:72,6,0	1/1:2,3:4:12.03:153,12,0	1/1:4,0:3:3:25,3,0	1/1:2,0:1:3:25,3,0	./.	1/1:1,0:1:2.98:22,3,0	1/1:2,0:1:2.99:24,3,0	./.	0/0:4,0:1:0:0,0,0	./.	./.	1/1:2,0:1:2.99:24,3,0	./.	./.	./.	./.	1/1:5,0:4:9:132,9,0	0/0:2,0:1:0:0,0,0	./.	./.
chr10	67698401	.	G	GGTATGTGTGT	7977.80	PASS	AB=0.956;AC=35;AF=0.625;AN=56;BaseQRankSum=4.188;DP=647;FS=3.819;HRun=0;HaplotypeScore=214.2972;InbreedingCoeff=0.2647;MQ=59.22;MQ0=9;MQRankSum=-5.664;QD=15.64;ReadPosRankSum=-3.315;VQSLOD=3.6059;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:36:99:177,0,236	0/1:15,0:15:45.16:45,0,148	0/0:17,0:11:21:0,21,212	0/0:25,0:22:55.89:0,56,504	0/1:13,0:14:27.07:27,0,55	1/1:5,0:14:6.02:215,6,0	1/1:35,0:39:65.51:750,66,0	0/1:25,0:25:99:137,0,314	0/0:18,0:19:25.56:0,26,439	1/1:14,10:30:56.73:1029,57,0	1/1:5,6:14:1.82:5,2,0	1/1:9,18:35:24.07:985,24,0	0/1:12,0:14:35.54:36,0,111	1/1:14,18:38:28.31:1131,28,0	1/1:6,15:24:9.03:475,9,0	1/1:6,0:15:11.71:358,12,0	0/0:35,0:36:18.94:0,19,879	0/1:22,0:22:3.63:4,0,697	1/1:7,6:14:36.37:579,36,0	1/1:19,0:20:23.69:424,24,0	1/1:8,21:39:8.85:192,9,0	0/1:17,0:16:77.91:78,0,96	0/0:17,0:18:17.22:0,17,139	0/0:21,0:21:10.93:0,11,95	1/1:5,13:24:1.25:3,1,0	0/1:22,0:21:99:486,0,200	1/1:3,14:19:18.06:739,18,0	0/1:13,0:13:99:103,0,144
chr10	67698431	.	TGC	T	2652.03	PASS	AB=0.941;AC=34;AF=0.654;AN=52;BaseQRankSum=-8.212;DP=529;FS=13.830;HRun=0;HaplotypeScore=140.1621;InbreedingCoeff=0.1962;MQ=47.26;MQ0=7;MQRankSum=4.482;QD=6.12;ReadPosRankSum=-5.604;VQSLOD=0.1532;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:25,2:29:8.87:94,9,0	0/1:11,0:13:21.84:22,0,32	0/0:7,0:3:0.47:0,0,2	./.	0/1:9,0:8:3.66:15,0,4	1/1:17,0:17:29.95:242,30,0	1/1:32,0:32:2.16:124,2,0	1/1:16,0:17:15.19:92,15,0	0/1:16,4:21:70.62:179,0,71	1/1:25,0:25:20.22:194,20,0	1/1:7,0:7:2.97:23,3,0	0/1:28,0:28:11.72:96,0,12	0/0:17,0:17:21.62:0,22,172	1/1:31,0:31:3.26:158,3,0	0/1:12,0:12:2.20:60,0,2	0/1:13,0:13:2.24:60,0,2	0/1:24,4:29:99:192,0,121	1/1:15,10:26:58.57:509,59,0	1/1:14,0:13:5.91:68,6,0	1/1:21,0:20:10.04:58,10,0	1/1:29,0:29:29.59:225,30,0	./.	0/0:17,0:16:3.10:0,3,25	0/0:21,0:21:0.94:0,1,1	1/1:21,0:21:23.78:182,24,0	0/1:16,0:15:2.74:3,0,151	1/1:21,0:20:10.90:204,11,0	0/0:9,0:9:14.88:0,15,127
chr10	67698446	.	G	GCA	426.93	PASS	AB=0.818;AC=7;AF=0.130;AN=54;BaseQRankSum=-1.145;DP=551;FS=0.000;HRun=0;HaplotypeScore=159.9754;InbreedingCoeff=0.4771;MQ=60.19;MQ0=1;MQRankSum=0.704;QD=4.96;ReadPosRankSum=0.709;VQSLOD=2.8353;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:46.79:0,47,343	0/0:14,0:14:30.07:0,30,238	0/1:10,0:7:0.95:1,0,41	0/1:7,0:6:5.03:5,0,55	0/0:9,0:9:16.62:0,17,97	0/0:17,0:17:30.04:0,30,310	0/0:28,0:28:39.87:0,40,386	0/0:15,0:15:32.16:0,32,205	0/0:30,0:30:63.43:0,63,578	0/0:20,0:20:46.49:0,46,451	0/0:8,0:8:14.89:0,15,117	0/0:29,0:29:48.77:0,49,357	1/1:17,1:18:45:517,45,0	0/0:36,0:36:49.43:0,49,397	0/0:15,0:15:28.93:0,29,225	0/0:11,0:11:20.06:0,20,163	0/0:29,0:29:70.15:0,70,781	0/0:26,0:26:69.87:0,70,513	0/0:16,0:16:38.65:0,39,329	0/0:17,0:17:26.40:0,26,238	0/0:30,0:30:44.90:0,45,415	./.	0/1:5,16:21:0.11:2,0,0	0/1:2,20:22:0:1,0,0	0/0:23,0:23:38.83:0,39,383	0/0:14,0:14:26.74:0,27,189	0/0:24,0:23:54.32:0,54,475	0/1:8,0:8:6.75:7,0,76
chr10	67699487	.	ATGC	A	1104.37	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.531;DP=731;FS=1.642;HRun=0;HaplotypeScore=103.6274;InbreedingCoeff=0.9993;MQ=82.91;MQ0=0;MQRankSum=-2.734;QD=40.90;ReadPosRankSum=1.495;VQSLOD=4.8085;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,120,2653	0/0:12,0:12:30.10:0,30,661	0/0:24,0:24:51.60:0,52,1387	0/0:23,0:22:54.10:0,54,987	0/0:22,0:22:63.22:0,63,1388	0/0:17,0:17:51.18:0,51,1154	0/0:18,0:18:51.18:0,51,1139	0/0:31,0:31:87.29:0,87,1917	1/1:1,26:27:72.25:1199,72,0	0/0:25,0:25:69.20:0,69,1495	0/0:17,0:17:51.18:0,51,1156	0/0:32,0:32:87.29:0,87,1923	0/0:38,0:38:99:0,105,2370	0/0:25,0:25:69.24:0,69,1564	0/0:43,0:42:99:0,129,2858	0/0:29,0:29:87.30:0,87,1952	0/0:42,0:42:99:0,123,2754	0/0:24,0:24:69.24:0,69,1563	0/0:25,0:25:72.25:0,72,1595	0/0:20,0:20:60.21:0,60,1340	0/0:36,0:36:96.80:0,97,2153	0/0:27,0:27:72.25:0,72,1594	0/0:13,0:13:39.13:0,39,875	0/0:28,0:28:81.28:0,81,1827	0/0:27,0:27:78.27:0,78,1766	0/0:30,0:30:90.31:0,90,2028	0/0:22,0:22:66.23:0,66,1488	0/0:13,0:13:39.13:0,39,883
chr10	67699577	.	CA	C	2768.41	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.332;DP=826;FS=35.864;HRun=1;HaplotypeScore=81.7464;InbreedingCoeff=0.9999;MQ=89.06;MQ0=0;MQRankSum=-4.090;QD=37.92;ReadPosRankSum=0.181;VQSLOD=1.1419;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,48:48:99:1886,135,0	0/0:13,0:13:36.11:0,36,548	0/0:23,0:23:69.22:0,69,1055	0/0:43,0:44:99:0,120,1820	1/1:0,25:25:72.24:1004,72,0	0/0:23,0:23:69.24:0,69,1103	0/0:25,0:25:72.17:0,72,1076	0/0:23,0:23:66.22:0,66,1027	0/0:24,0:24:69.24:0,69,1103	0/0:41,0:41:99:0,120,1919	0/0:21,0:21:63.21:0,63,1007	0/0:34,0:34:99:0,102,1628	0/0:46,0:46:99:0,135,2115	0/0:29,0:29:81.24:0,81,1271	0/0:39,0:39:99:0,117,1821	0/0:31,0:31:93.32:0,93,1485	0/0:25,0:25:75.23:0,75,1174	0/0:32,0:32:90.29:0,90,1413	0/0:26,0:26:78.24:0,78,1166	0/0:22,0:22:66.23:0,66,1055	0/0:53,0:53:99:0,160,2515	0/0:21,0:21:63.21:0,63,1004	0/0:18,0:18:54.17:0,54,838	0/0:33,0:33:79.37:0,79,1515	0/0:30,0:30:90.29:0,90,1412	0/0:25,0:25:75.24:0,75,1176	0/0:33,0:33:99:0,99,1580	0/0:19,0:19:57.19:0,57,911
chr10	67702085	.	G	GTCGTCA	5009.21	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-10.436;DP=797;FS=10.566;HRun=0;HaplotypeScore=154.9463;InbreedingCoeff=0.9869;MQ=71.10;MQ0=0;MQRankSum=-5.091;QD=39.13;ReadPosRankSum=-2.873;VQSLOD=3.5840;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,108,2195	1/1:0,12:15:15.05:413,15,0	0/0:24,0:22:63.04:0,63,905	0/0:30,0:28:69.12:0,69,1048	0/0:25,0:25:72.16:0,72,1502	0/0:29,0:29:81.22:0,81,1754	0/0:32,0:32:96.16:0,96,1798	1/1:2,25:40:99:2049,114,0	1/1:4,24:31:39:1376,39,0	0/0:21,0:21:60.13:0,60,1149	0/0:22,0:22:63.20:0,63,1372	0/0:34,0:34:99:0,102,2204	0/0:35,0:35:99:0,102,1988	0/0:34,0:34:99:0,99,2058	0/0:38,0:38:99:0,102,2108	0/0:56,1:57:70.72:0,71,2964	1/1:1,19:22:18.06:635,18,0	1/1:4,13:20:15.05:536,15,0	0/0:17,0:17:51.11:0,51,819	0/0:26,0:26:75.16:0,75,1505	0/0:37,0:37:99:0,105,2093	0/0:17,0:17:48.09:0,48,945	0/0:20,0:20:54.10:0,54,1002	0/0:33,0:33:96.26:0,96,2078	0/0:14,0:14:42.07:0,42,793	0/0:33,0:33:93.12:0,93,1605	0/0:45,0:43:99:0,126,2600	0/0:9,0:9:14.96:0,15,199
chr10	67703123	.	CTGTATGTATGTATGTA	C	12486.62	PASS	AC=24;AF=0.444;AN=54;BaseQRankSum=11.694;DP=688;FS=2.654;HRun=0;HaplotypeScore=286.9839;InbreedingCoeff=0.9556;MQ=68.56;MQ0=8;MQRankSum=-13.038;QD=50.35;ReadPosRankSum=1.003;VQSLOD=4.3362;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:77.19:0,77,4739	0/0:6,0:14:27.07:0,27,1001	0/0:37,0:17:3.90:0,4,52	0/0:29,0:21:9.57:0,10,159	0/0:34,0:34:78.27:0,78,5400	1/1:5,8:13:12.04:527,12,0	1/1:7,10:17:15.05:659,15,0	0/0:28,0:27:30.07:0,30,686	0/0:30,0:30:63.20:0,63,4262	1/1:10,13:23:30:1112,30,0	1/1:4,21:25:24.08:1047,24,0	1/1:5,12:17:18.06:790,18,0	0/0:18,0:18:51.17:0,51,3456	1/1:7,11:18:30.10:1317,30,0	1/1:9,16:25:42.14:1844,42,0	1/1:8,8:16:12.04:527,12,0	0/0:11,0:29:54.17:0,54,2064	0/0:19,0:19:33.10:0,33,1746	1/1:11,6:17:18.06:584,18,0	1/1:12,21:33:39.13:1712,39,0	./.	0/0:21,0:21:38.74:0,39,2756	0/0:31,0:31:66.21:0,66,3980	0/0:24,0:24:51.13:0,51,2492	1/1:6,17:23:36.12:1578,36,0	0/0:35,0:35:81.27:0,81,5078	1/1:12,9:21:18.06:790,18,0	0/0:26,0:26:33.10:0,33,1650
chr10	67704301	.	TTGTCTGTC	T	2073.99	PASS	AB=0.758;AC=15;AF=0.288;AN=52;BaseQRankSum=9.075;DP=757;FS=1.440;HRun=0;HaplotypeScore=184.4813;InbreedingCoeff=0.8111;MQ=69.37;MQ0=5;MQRankSum=-6.804;QD=10.80;ReadPosRankSum=-0.137;VQSLOD=2.5881;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:20,15:34:18.06:430,18,0	1/1:4,4:8:12.04:295,12,0	./.	./.	1/1:14,14:29:45.05:862,45,0	0/0:24,0:24:45.15:0,45,1710	0/0:24,0:24:42.14:0,42,1460	1/1:35,0:35:2.97:20,3,0	0/0:14,0:28:38.95:0,39,401	0/0:25,0:24:33.11:0,33,1114	0/0:26,0:26:39.12:0,39,1308	0/0:24,0:24:48.16:0,48,1866	0/0:17,0:17:30.10:0,30,1136	0/0:22,0:23:39.12:0,39,1441	0/0:40,0:39:81.26:0,81,3100	0/0:32,0:32:36.12:0,36,1324	0/1:17,7:25:62.59:121,0,63	1/1:13,4:17:3.48:76,3,0	0/0:23,0:23:24.08:0,24,878	0/0:27,0:27:33.11:0,33,1264	0/0:36,0:36:57.18:0,57,2126	0/0:26,0:26:39.12:0,39,1447	0/0:28,0:28:45.14:0,45,1677	0/0:40,0:40:90.29:0,90,3393	0/0:26,0:26:36.12:0,36,1432	1/1:20,0:28:18.53:336,19,0	0/0:28,0:28:39.13:0,39,1580	1/1:12,0:15:6.02:112,6,0
chr10	67705857	.	T	TG	1656.86	PASS	AB=0.786;AC=10;AF=0.179;AN=56;BaseQRankSum=-8.499;DP=447;FS=1.121;HRun=7;HaplotypeScore=51.7862;InbreedingCoeff=0.7483;MQ=78.80;MQ0=0;MQRankSum=3.663;QD=19.49;ReadPosRankSum=-1.080;VQSLOD=2.8856;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:66.07:0,66,629	0/1:1,3:4:19.93:63,0,20	0/0:27,0:21:13.11:0,13,226	0/1:18,0:16:25.97:26,0,176	0/0:24,0:24:57.06:0,57,538	0/0:12,0:11:36.06:0,36,347	0/0:21,0:21:48.06:0,48,463	1/1:3,17:20:51.16:613,51,0	1/1:0,9:9:21.06:254,21,0	0/0:19,0:19:54.06:0,54,513	0/0:10,0:10:27.04:0,27,260	0/0:17,0:17:45.06:0,45,433	0/0:23,0:23:66.08:0,66,629	0/0:15,0:15:42.06:0,42,405	0/0:12,0:12:33.05:0,33,318	0/0:16,0:16:42.06:0,42,405	1/1:1,15:16:30.09:362,30,0	1/1:1,17:18:42.13:507,42,0	0/0:7,0:7:15.02:0,15,145	0/0:15,0:15:39.05:0,39,376	0/0:15,0:15:42.04:0,42,394	0/0:14,0:14:42.07:0,42,405	0/0:14,0:14:36.06:0,36,347	0/0:8,0:8:24.03:0,24,226	0/0:14,0:14:36.06:0,36,347	0/0:13,0:13:33.05:0,33,319	0/0:23,0:23:51.07:0,51,490	0/0:15,0:15:45.07:0,45,434
chr10	67706518	.	C	CA	1536.77	PASS	AB=0.865;AC=48;AF=0.857;AN=56;BaseQRankSum=1.725;DP=512;FS=7.518;HRun=17;HaplotypeScore=90.6686;InbreedingCoeff=-0.0487;MQ=66.46;MQ0=4;MQRankSum=-1.376;QD=3.00;ReadPosRankSum=-1.186;VQSLOD=-0.3897;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:21:15.56:61,16,0	1/1:9,0:9:11.55:51,12,0	0/1:36,1:21:0.57:1,0,23	0/1:20,0:11:0:0,0,0	1/1:31,0:30:12.27:46,12,0	0/1:7,9:17:11.80:66,0,12	0/1:26,0:26:12.91:99,0,13	1/1:26,0:26:17.02:81,17,0	1/1:13,0:10:4.59:26,5,0	0/1:6,0:6:5.87:15,0,6	1/1:7,6:13:5.46:28,5,0	1/1:20,0:20:1.50:102,1,0	1/1:7,0:5:1.19:3,1,0	0/1:11,9:20:16.22:16,0,22	1/1:22,0:22:9.40:198,9,0	1/1:14,0:14:1.90:105,2,0	1/1:24,0:23:4.89:43,5,0	1/1:6,0:23:2.84:15,3,0	1/1:31,3:36:8.83:252,9,0	1/1:9,4:12:6.87:110,7,0	0/1:23,1:25:24.01:65,0,24	1/1:7,0:7:4.74:14,5,0	1/1:9,0:9:5.01:17,5,0	1/1:6,0:6:5.59:37,6,0	0/1:7,7:13:13.16:69,0,13	1/1:19,0:19:8.89:34,9,0	1/1:18,1:19:15.25:99,15,0	1/1:14,0:13:2.10:6,2,0
chr10	67707188	.	CG	C	559.54	PASS	AB=0.538;AC=3;AF=0.054;AN=56;BaseQRankSum=-1.322;DP=557;FS=5.957;HRun=3;HaplotypeScore=83.1456;InbreedingCoeff=0.5985;MQ=65.18;MQ0=1;MQRankSum=-0.829;QD=26.64;ReadPosRankSum=1.996;VQSLOD=2.6686;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:25:75.24:0,75,1059	0/0:5,0:5:9.03:0,9,129	0/0:24,0:24:66.21:0,66,922	0/0:21,0:20:54.18:0,54,751	0/0:19,0:19:57.19:0,57,816	0/0:15,0:15:42.14:0,42,600	0/0:24,0:24:69.19:0,69,967	0/0:29,0:29:87.23:0,87,1194	0/0:28,0:28:81.19:0,81,1111	0/0:22,0:22:63.19:0,63,886	0/0:7,0:7:12.04:0,12,170	0/0:36,0:36:99:0,99,1333	0/0:23,0:23:57.19:0,57,814	0/0:20,0:20:60.12:0,60,813	0/0:25,0:25:72.16:0,72,985	0/0:29,0:29:84.15:0,84,1136	0/0:28,0:28:75.25:0,75,1076	0/0:21,0:21:57.11:0,57,773	0/0:14,0:14:39.13:0,39,561	0/0:12,0:12:33.11:0,33,473	0/0:26,0:26:63.10:0,63,836	0/0:18,0:18:51.12:0,51,690	0/0:6,0:6:15.05:0,15,215	0/0:27,0:27:75.21:0,75,1053	0/0:11,0:11:33.11:0,33,471	0/1:2,12:14:44.18:404,0,44	0/0:20,0:20:54.14:0,54,734	1/1:0,7:7:21.07:260,21,0
chr10	67707783	.	C	CAT	423.28	PASS	AB=0.837;AC=16;AF=0.333;AN=48;BaseQRankSum=4.074;DP=355;FS=5.377;HRun=0;HaplotypeScore=135.2468;InbreedingCoeff=0.3055;MQ=43.82;MQ0=4;MQRankSum=-2.839;QD=3.14;ReadPosRankSum=-1.048;VQSLOD=2.4044;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:3.01:0,3,35	1/1:4,3:7:4.37:61,4,0	0/0:8,0:5:9.88:0,10,93	0/0:8,0:3:2.78:0,3,18	0/0:26,1:27:5.79:0,6,76	0/0:12,2:14:3.33:0,3,38	0/0:17,3:20:33.82:0,34,285	0/1:19,2:19:25.99:176,0,26	1/1:9,8:17:9.76:41,10,0	0/0:19,0:19:57.04:0,57,621	0/1:5,1:6:0:0,0,0	0/1:12,3:15:0:0,0,0	0/1:7,4:11:60.82:61,0,64	1/1:8,2:10:2.22:7,2,0	0/1:15,4:19:0.02:0,0,0	0/0:12,2:14:2.66:0,3,13	1/1:14,0:14:5.53:43,6,0	1/1:2,1:3:5.93:74,6,0	0/0:14,0:13:4.85:0,5,255	0/0:9,2:11:7.14:0,7,73	0/0:13,0:13:8.70:0,9,97	./.	0/0:10,0:10:0:0,0,0	./.	./.	0/0:20,1:21:5.58:0,6,626	0/1:10,2:12:91.47:91,0,130	./.
chr10	67707858	.	T	TAC	1937.91	PASS	AB=0.841;AC=11;AF=0.204;AN=54;BaseQRankSum=-9.640;DP=596;FS=9.717;HRun=0;HaplotypeScore=192.2347;InbreedingCoeff=0.4215;MQ=47.14;MQ0=12;MQRankSum=-1.823;QD=13.18;ReadPosRankSum=-2.559;VQSLOD=2.0007;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:18.81:0,19,78	1/1:3,14:17:23.64:376,24,0	0/0:37,0:14:36:0,36,411	0/0:40,0:15:17.34:0,17,187	0/0:29,0:30:11.94:0,12,109	0/0:19,0:19:16.34:0,16,81	0/0:19,0:19:8.23:0,8,37	1/1:27,1:25:7.46:236,7,0	0/1:6,15:22:19.78:276,0,20	0/0:38,0:38:23.03:0,23,225	0/0:17,0:17:8.23:0,8,37	0/0:22,0:22:21.71:0,22,94	0/0:10,0:10:2.84:0,3,14	0/0:20,0:20:16.52:0,17,74	0/0:23,0:23:16.72:0,17,85	0/0:14,0:14:19.21:0,19,85	1/1:13,18:31:66.69:1004,67,0	0/1:4,6:10:19.60:167,0,20	0/1:9,0:8:11.94:12,0,35	0/0:27,0:27:55.55:0,56,256	0/0:26,0:26:24.70:0,25,110	./.	0/1:10,0:10:0.09:0,0,0	0/0:11,0:11:0:0,0,0	0/0:19,0:19:25.17:0,25,110	0/1:20,0:20:16.73:17,0,51	0/0:32,0:32:8.71:0,9,146	0/0:19,0:19:27.45:0,27,122
chr10	67707862	.	CACACACACACAT	C	104.76	PASS	AC=6;AF=0.111;AN=54;BaseQRankSum=2.324;DP=607;FS=1.889;HRun=0;HaplotypeScore=268.0864;InbreedingCoeff=0.6985;MQ=49.78;MQ0=12;MQRankSum=-1.992;QD=3.27;ReadPosRankSum=-3.925;VQSLOD=1.8105;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:27.05:0,27,646	0/0:17,0:17:27.56:0,28,1075	0/0:37,0:18:47.92:0,48,1609	0/0:40,0:16:29.69:0,30,792	0/0:31,0:31:38.65:0,39,1049	0/0:19,0:19:15.06:0,15,357	0/0:20,0:20:11.98:0,12,234	0/0:29,0:26:39.59:0,40,994	0/0:21,0:21:26.62:0,27,861	0/0:39,0:39:84.77:0,85,1836	0/0:17,0:17:7.05:0,7,210	0/0:23,0:23:22.45:0,22,503	1/1:7,3:10:6.65:185,7,0	0/0:21,0:21:20.99:0,21,461	0/0:23,0:23:18.06:0,18,428	0/0:14,0:14:21.07:0,21,499	0/0:31,0:31:73.80:0,74,2789	0/0:10,0:10:17.93:0,18,615	0/0:9,0:8:15.05:0,15,317	0/0:26,0:26:66.23:0,66,1533	0/0:30,0:30:32.18:0,32,733	./.	1/1:7,4:11:0.37:1,0,0	1/1:8,3:11:0.47:1,0,0	0/0:20,0:20:30.10:0,30,699	0/0:19,0:19:29.07:0,29,742	0/0:34,0:34:51.35:0,51,1310	0/0:19,0:19:30.10:0,30,713
chr10	67707870	.	CACAT	C	10600.75	PASS	AB=1.000;AC=45;AF=0.804;AN=56;BaseQRankSum=-8.649;DP=626;FS=0.000;HRun=0;HaplotypeScore=160.6973;InbreedingCoeff=0.4439;MQ=55.36;MQ0=12;MQRankSum=1.640;QD=20.46;ReadPosRankSum=0.550;VQSLOD=4.5795;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:26:24.01:340,24,0	0/1:16,0:16:12.90:13,0,206	0/0:40,0:23:58.19:0,58,963	0/0:38,0:17:28.39:0,28,510	1/1:29,1:30:20.85:520,21,0	1/1:9,10:19:20.16:330,20,0	1/1:4,19:23:11.79:190,12,0	0/1:33,0:30:99:161,0,192	0/1:25,0:25:47.90:48,0,175	1/1:2,38:40:99:1818,111,0	1/1:1,17:18:9.97:171,10,0	1/1:6,16:22:32.92:477,33,0	1/1:15,0:15:22.14:170,22,0	1/1:1,17:18:21.07:379,21,0	1/1:9,12:21:18.06:341,18,0	1/1:1,12:13:24.01:415,24,0	0/0:30,0:30:6.46:0,6,539	0/1:11,0:11:18.97:19,0,165	1/1:5,4:8:21.05:320,21,0	1/1:6,19:25:69.22:1231,69,0	1/1:2,30:32:27.06:511,27,0	1/1:6,0:6:5.99:48,6,0	1/1:11,0:11:6.05:44,6,0	0/1:10,0:10:0.04:0,0,0	1/1:3,19:22:30.10:559,30,0	1/1:3,17:20:52.89:735,53,0	1/1:12,19:31:74.99:1195,75,0	1/1:0,22:22:30.10:567,30,0
chr10	67707872	.	CAT	C	5548.81	PASS	AB=0.970;AC=46;AF=0.821;AN=56;BaseQRankSum=-4.730;DP=614;FS=7.178;HRun=0;HaplotypeScore=161.2058;InbreedingCoeff=0.3100;MQ=55.82;MQ0=10;MQRankSum=1.457;QD=10.26;ReadPosRankSum=0.204;VQSLOD=3.6659;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,25:25:23.98:311,24,0	0/1:16,0:16:9.72:28,0,10	0/0:37,0:23:61.45:0,61,805	0/0:34,0:16:14.87:0,15,376	1/1:16,15:31:48:595,48,0	1/1:19,0:19:13.81:142,14,0	1/1:22,0:22:11.68:82,12,0	0/1:32,0:29:32.25:259,0,32	0/1:25,0:25:15.10:86,0,15	1/1:39,0:39:99:810,110,0	1/1:18,0:18:8.94:65,9,0	1/1:21,0:21:32.63:225,33,0	1/1:15,0:15:22.85:167,23,0	1/1:17,0:17:20.72:139,21,0	1/1:21,0:21:20.85:149,21,0	1/1:12,0:12:23.77:163,24,0	0/1:31,0:31:49.37:100,0,49	0/1:11,0:11:28.69:29,0,39	1/1:9,0:8:19.94:142,20,0	1/1:24,1:25:68.53:503,69,0	1/1:32,0:32:26.71:187,27,0	1/1:5,1:6:5.99:48,6,0	1/1:11,0:11:6.33:44,6,0	0/1:7,2:9:0:0,0,0	1/1:21,0:21:29.74:207,30,0	1/1:19,0:19:50.27:359,50,0	1/1:32,0:32:73.72:498,74,0	1/1:22,0:22:29.77:209,30,0
chr10	67709714	.	CTGTGTGTGTGTGTG	C	8739.56	PASS	AB=0.843;AC=38;AF=0.792;AN=48;BaseQRankSum=4.634;DP=489;FS=0.000;HRun=0;HaplotypeScore=157.9274;InbreedingCoeff=0.1490;MQ=71.34;MQ0=11;MQRankSum=-3.051;QD=21.90;ReadPosRankSum=3.921;VQSLOD=3.4618;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:19,0:32:31.83:181,0,32	1/1:7,0:7:1.40:51,1,0	0/0:33,0:20:12.02:0,12,385	0/0:34,0:25:18.06:0,18,501	1/1:5,0:9:3.01:58,3,0	1/1:2,1:4:9.01:241,9,0	1/1:7,11:16:6.02:237,6,0	0/1:17,8:24:35.52:173,0,36	1/1:10,15:25:21.07:801,21,0	1/1:11,0:11:5.97:78,6,0	./.	1/1:6,25:32:39.08:1524,39,0	1/1:5,7:12:2.36:118,2,0	1/1:6,15:21:24.08:951,24,0	1/1:6,11:18:30.10:1168,30,0	1/1:4,7:11:23.87:846,24,0	1/1:10,9:19:6.02:238,6,0	1/1:4,8:12:12.04:434,12,0	1/1:12,10:20:20.87:341,21,0	./.	0/1:33,1:36:15.99:96,0,16	./.	./.	1/1:10,18:31:12.51:376,13,0	1/1:11,0:11:1.14:101,1,0	0/1:11,0:11:20.49:20,0,39	0/1:11,11:21:85.38:707,0,85	0/1:9,0:9:0.60:1,0,22
chr10	67714104	.	T	TG	1827.81	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=1.845;DP=639;FS=1.923;HRun=3;HaplotypeScore=117.0952;InbreedingCoeff=0.9988;MQ=91.48;MQ0=0;MQRankSum=-4.879;QD=35.84;ReadPosRankSum=1.053;VQSLOD=3.1492;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:48.15:0,48,576	0/0:11,0:11:30.09:0,30,360	0/0:35,0:35:99:0,102,1190	0/0:20,0:20:54.14:0,54,616	0/0:17,0:17:42.13:0,42,503	0/0:16,0:16:45.14:0,45,540	0/0:24,0:24:63.19:0,63,749	0/0:38,0:38:99:0,102,1214	1/1:0,25:25:69.02:964,69,0	0/0:32,0:32:96.28:0,96,1133	0/0:13,0:13:39.12:0,39,468	0/0:19,0:19:54.17:0,54,648	0/0:26,0:26:78.21:0,78,910	0/0:24,0:24:66.20:0,66,789	0/0:26,0:26:72.18:0,72,863	0/0:28,0:28:81.24:0,81,961	0/0:23,0:23:66.20:0,66,792	0/0:26,0:26:78.22:0,78,922	0/0:29,0:29:72.21:0,72,854	0/0:25,0:25:72.20:0,72,841	0/0:36,0:36:87.23:0,87,1018	0/0:27,0:27:75.20:0,75,873	0/0:8,0:8:24.06:0,24,277	0/0:19,0:19:51.16:0,51,612	0/0:23,0:23:57.17:0,57,684	1/1:2,13:15:42.14:587,42,0	0/0:26,0:26:75.17:0,75,871	1/1:1,10:11:30.10:419,30,0
chr10	67714118	.	AC	A	9917.91	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-6.565;DP=612;FS=4.112;HRun=5;HaplotypeScore=88.5884;InbreedingCoeff=0.9998;MQ=88.33;MQ0=0;MQRankSum=-3.019;QD=29.96;ReadPosRankSum=3.917;VQSLOD=5.3322;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:51.56:0,52,606	0/0:11,0:11:30.10:0,30,410	0/0:32,0:32:75.41:0,75,894	0/0:16,0:16:44.59:0,45,520	0/0:17,0:17:48.12:0,48,588	1/1:0,15:15:45.13:510,45,0	1/1:0,24:24:63.18:715,63,0	0/0:37,0:37:99:0,102,1366	0/0:24,0:24:69.23:0,69,937	1/1:1,24:25:69.20:783,69,0	1/1:0,14:14:39.11:442,39,0	1/1:0,20:20:57.16:647,57,0	0/0:25,0:25:72.22:0,72,967	1/1:1,25:26:63.18:714,63,0	1/1:1,23:24:63.18:715,63,0	1/1:1,23:24:69.20:783,69,0	0/0:22,0:22:66.14:0,66,845	0/0:23,0:23:66.22:0,66,903	1/1:5,21:26:60.17:680,60,0	1/1:0,25:25:72.14:788,72,0	1/1:1,34:35:87.25:987,87,0	0/0:24,0:24:60.18:0,60,788	0/0:11,0:11:33.11:0,33,451	0/0:20,0:20:54.17:0,54,721	1/1:3,18:21:48.13:537,48,0	1/1:1,14:15:42.12:476,42,0	1/1:2,24:26:69.20:783,69,0	1/1:0,11:11:33.05:360,33,0
chr10	67714400	.	T	TG	19423.86	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=5.064;DP=728;FS=3.624;HRun=0;HaplotypeScore=94.8622;InbreedingCoeff=0.9952;MQ=86.41;MQ0=0;MQRankSum=-4.835;QD=43.85;ReadPosRankSum=3.679;VQSLOD=4.9236;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,38:38:99:1727,108,0	0/0:4,0:4:12.04:0,12,168	0/0:21,0:21:60.19:0,60,812	0/0:27,0:27:74.96:0,75,889	1/1:0,29:29:78.27:1247,78,0	1/1:0,24:24:69.24:1103,69,0	1/1:0,26:26:69.24:1103,69,0	0/0:27,0:27:72.23:0,72,993	0/0:29,0:29:84.25:0,84,1154	1/1:0,24:24:69.24:1104,69,0	1/1:1,12:13:27.09:432,27,0	1/1:1,36:37:99:1583,99,0	0/0:37,0:37:99:0,111,1551	1/1:1,25:26:72.25:1151,72,0	1/1:0,41:41:99:1774,111,0	1/1:0,21:21:51.17:815,51,0	0/0:35,0:35:99:0,105,1466	0/0:20,0:20:57.17:0,57,776	1/1:0,17:17:51.15:790,51,0	1/1:0,12:12:33.11:527,33,0	1/1:1,47:48:99:2111,132,0	0/0:27,0:27:78.20:0,78,1048	0/0:20,0:20:54.18:0,54,755	0/0:38,0:38:99:0,114,1594	1/1:0,11:11:26.96:432,27,0	1/1:2,33:35:99:1608,102,0	1/1:0,30:30:87.30:1391,87,0	1/1:0,11:11:33.11:527,33,0
chr10	67714649	.	T	TACCCCC	2453.35	PASS	AB=1.000;AC=36;AF=0.667;AN=54;BaseQRankSum=-8.428;DP=306;FS=48.834;HRun=0;HaplotypeScore=81.7634;InbreedingCoeff=0.4722;MQ=79.63;MQ0=1;MQRankSum=-2.484;QD=15.73;ReadPosRankSum=-3.086;VQSLOD=-0.0889;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:60.22:0,60,1131	./.	0/0:28,0:25:47.73:0,48,734	0/0:21,0:20:39.58:0,40,660	0/0:16,0:16:16.11:0,16,426	1/1:1,1:2:3.01:99,3,0	1/1:9,1:10:12.48:248,12,0	0/1:14,0:13:1.69:102,0,2	1/1:3,3:6:3.01:99,3,0	1/1:3,1:4:1.27:88,1,0	1/1:4,1:5:6.01:126,6,0	1/1:3,3:6:6.02:198,6,0	0/0:10,0:10:3.08:0,3,290	1/1:4,1:5:2.97:93,3,0	1/1:2,6:7:12.04:390,12,0	1/1:5,1:6:6.01:126,6,0	1/1:4,0:4:5.98:48,6,0	1/1:3,2:5:12.01:247,12,0	1/1:3,0:3:1.36:3,1,0	1/1:0,3:3:8.94:139,9,0	1/1:8,0:8:11.99:102,12,0	0/1:23,0:23:45.41:45,0,543	0/0:14,0:14:23.38:0,23,306	0/1:26,0:26:65.21:65,0,552	1/1:4,2:6:5.98:118,6,0	0/0:23,0:23:30.33:0,30,754	1/1:0,1:3:9.03:290,9,0	0/1:8,0:8:2.33:2,0,241
chr10	67714799	.	TTG	T	494.94	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=5.492;DP=329;FS=7.517;HRun=0;HaplotypeScore=58.4278;InbreedingCoeff=0.5558;MQ=53.94;MQ0=8;MQRankSum=-6.789;QD=10.76;ReadPosRankSum=-1.716;VQSLOD=1.8253;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:29:51.15:0,51,806	0/0:4,0:4:12.04:0,12,197	0/0:21,0:6:11.93:0,12,146	0/0:16,0:6:12.30:0,12,132	0/0:20,0:19:51.17:0,51,829	0/0:11,0:9:24.08:0,24,395	0/0:11,0:9:17.98:0,18,273	0/0:13,0:13:6.87:0,7,296	0/0:4,0:4:12.04:0,12,202	0/0:11,0:11:23.25:0,23,323	0/0:8,0:8:15.05:0,15,248	0/0:7,0:7:8.97:0,9,152	0/0:20,0:19:33.04:0,33,493	0/0:12,0:11:20.81:0,21,315	0/0:7,0:6:12.01:0,12,149	0/0:6,0:6:14.98:0,15,202	0/1:18,0:18:30.02:30,0,77	0/0:10,0:10:28.45:0,28,327	0/0:10,0:10:30.01:0,30,430	0/0:4,0:3:3.01:0,3,51	0/0:7,0:7:20.58:0,21,257	0/0:11,0:11:24.08:0,24,399	0/0:12,0:12:32.43:0,32,444	0/0:17,0:17:34.64:0,35,520	0/0:3,0:3:9:0,9,123	1/1:10,9:16:44.30:500,44,0	0/0:7,0:6:14.76:0,15,247	1/1:6,3:7:5.94:85,6,0
chr10	67714870	.	G	GCCTTGCAGCT	1339.29	PASS	AB=0.652;AC=3;AF=0.060;AN=50;BaseQRankSum=0.377;DP=286;FS=2.768;HRun=0;HaplotypeScore=70.4973;InbreedingCoeff=0.3773;MQ=41.89;MQ0=30;MQRankSum=-2.958;QD=66.96;ReadPosRankSum=-0.203;VQSLOD=3.1741;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:25:51.18:0,51,1493	0/0:3,0:2:6.02:0,6,193	./.	./.	0/0:14,0:11:18.06:0,18,518	0/0:16,0:12:30.10:0,30,922	0/0:14,0:11:33.11:0,33,997	./.	0/0:8,0:8:21.05:0,21,588	0/0:5,0:4:12.04:0,12,386	0/0:6,0:5:6.02:0,6,136	0/0:11,0:11:15.05:0,15,440	0/0:9,0:8:18.05:0,18,507	0/0:12,0:10:24.06:0,24,629	0/0:6,0:5:12.04:0,12,384	0/0:6,0:4:9.01:0,9,217	0/0:26,0:22:51.14:0,51,1546	0/0:9,0:7:15.05:0,15,482	0/0:11,0:10:21.07:0,21,675	0/0:6,0:4:5.98:0,6,116	0/0:18,0:13:27.09:0,27,761	0/0:4,0:3:5.15:0,5,190	0/0:8,0:5:12.04:0,12,336	0/0:15,0:13:24.08:0,24,725	0/0:6,0:6:18.06:0,18,522	0/1:7,6:11:31.90:966,0,32	0/0:12,0:11:30.10:0,30,965	1/1:2,2:4:9.03:469,9,0
chr10	67715375	.	C	CT	2565.63	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-3.804;DP=524;FS=9.696;HRun=0;HaplotypeScore=112.5620;InbreedingCoeff=0.9914;MQ=67.80;MQ0=11;MQRankSum=-1.335;QD=37.73;ReadPosRankSum=1.574;VQSLOD=2.6679;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,117,1540	0/0:5,0:5:15.04:0,15,194	0/0:25,0:16:41.90:0,42,522	0/0:29,0:17:50.41:0,50,575	0/0:28,0:28:75.24:0,75,1020	0/0:14,0:14:39.12:0,39,528	0/0:17,0:16:39.09:0,39,517	0/0:23,0:23:66.21:0,66,905	0/0:14,0:14:42.12:0,42,554	0/0:19,1:20:53.91:0,54,720	0/0:14,0:14:42.14:0,42,573	0/0:20,0:20:48.06:0,48,610	1/1:0,6:6:15.05:234,15,0	0/0:24,0:24:54.18:0,54,741	0/0:23,0:23:60.20:0,60,832	0/0:14,0:14:36.09:0,36,481	0/0:35,0:35:96.29:0,96,1306	0/0:15,0:15:45.12:0,45,608	0/0:11,0:11:30.03:0,30,373	0/0:22,0:22:63.20:0,63,856	0/0:24,0:23:51.17:0,51,713	1/1:0,10:10:30.10:468,30,0	1/1:0,6:6:18.06:280,18,0	1/1:0,20:20:45.15:693,45,0	0/0:13,0:13:36.11:0,36,487	1/1:0,15:14:42.14:655,42,0	0/0:21,0:21:54.18:0,54,745	1/1:0,11:11:27.09:422,27,0
chr10	67715391	.	AACTG	A	12478.54	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=3.115;DP=511;FS=8.430;HRun=0;HaplotypeScore=110.7622;InbreedingCoeff=0.9936;MQ=80.22;MQ0=0;MQRankSum=-5.079;QD=41.60;ReadPosRankSum=3.490;VQSLOD=5.2329;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,37:44:96.33:1738,96,0	0/0:4,0:4:12.04:0,12,312	0/0:24,0:23:56.62:0,57,1353	0/0:21,0:21:51:0,51,1196	1/1:1,23:24:54.19:1004,54,0	1/1:0,17:17:48.16:895,48,0	1/1:1,17:17:39.13:727,39,0	0/0:18,0:18:51.16:0,51,1256	0/0:14,0:14:42.14:0,42,1083	1/1:2,17:19:54.13:911,54,0	1/1:1,14:15:36.04:632,36,0	1/1:1,21:22:51.17:951,51,0	0/0:7,0:7:18.06:0,18,479	1/1:0,22:22:54.19:1007,54,0	1/1:2,18:20:42.14:784,42,0	1/1:2,10:12:27.09:503,27,0	0/0:34,0:34:87.30:0,87,2274	0/0:16,0:16:45.15:0,45,1180	1/1:3,10:13:30.10:531,30,0	1/1:4,11:15:27.09:501,27,0	1/1:3,23:26:51.17:951,51,0	0/0:12,0:12:33.11:0,33,860	0/0:8,0:8:21.07:0,21,559	0/0:23,0:23:51.18:0,51,1329	1/1:1,12:13:30.10:560,30,0	0/0:17,0:17:51.18:0,51,1331	1/1:2,18:20:42.14:783,42,0	0/0:13,0:13:33.11:0,33,879
chr10	67716211	.	ACTATAGCTCCCCTT	A	18608.26	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=16.842;DP=558;FS=9.169;HRun=0;HaplotypeScore=231.1608;InbreedingCoeff=0.9958;MQ=76.87;MQ0=0;MQRankSum=-16.031;QD=96.42;ReadPosRankSum=0.743;VQSLOD=3.5525;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,22:22:39.13:1631,39,0	1/1:0,7:7:18.06:796,18,0	0/0:18,0:18:48.16:0,48,2952	0/0:18,0:18:21.96:0,22,2593	1/1:0,24:24:48.64:1993,49,0	0/0:23,0:23:69.24:0,69,4752	0/0:24,0:24:72.25:0,72,5006	1/1:0,18:18:54.14:1755,54,0	1/1:0,15:15:39.13:1629,39,0	0/0:21,0:21:63.22:0,63,4456	0/0:13,0:13:39.13:0,39,2692	0/0:23,0:23:69.24:0,69,4567	1/1:0,28:28:78.27:3450,78,0	0/0:21,0:21:63.22:0,63,4388	0/0:28,0:28:84.29:0,84,5621	0/0:24,0:24:69.22:0,69,4171	1/1:0,14:14:27.09:1046,27,0	1/1:0,16:16:45.15:1991,45,0	0/0:28,0:28:84.29:0,84,5426	0/0:17,0:17:51.18:0,51,3522	0/0:33,0:33:96.33:0,96,6340	1/1:0,14:14:36.12:1533,36,0	1/1:0,15:15:33.11:1424,33,0	1/1:0,20:20:32.83:1361,33,0	0/0:21,0:21:63.22:0,63,4205	0/0:29,0:29:84.29:0,84,5826	0/0:19,0:19:57.20:0,57,3693	0/0:5,0:5:15.05:0,15,1038
chr10	67717024	.	CATTGTTGTTGTTCTT	C	7439.57	PASS	AB=0.656;AC=11;AF=0.196;AN=56;BaseQRankSum=12.125;DP=625;FS=0.507;HRun=0;HaplotypeScore=261.2641;InbreedingCoeff=0.8371;MQ=72.99;MQ0=0;MQRankSum=-11.962;QD=65.26;ReadPosRankSum=1.369;VQSLOD=4.3421;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:57.20:0,57,3725	0/0:8,0:8:21.07:0,21,1242	0/0:18,0:18:36.12:0,36,1436	0/0:17,0:17:27.06:0,27,1212	0/0:22,0:22:57.20:0,57,3392	0/0:30,0:30:72.23:0,72,4810	0/0:20,0:20:45.15:0,45,2615	0/0:48,0:48:81.27:0,81,4907	0/0:22,0:22:51.18:0,51,2871	0/0:31,0:30:75.26:0,75,5358	0/0:19,0:19:48.16:0,48,3031	0/0:21,0:21:54.17:0,54,3496	1/1:4,19:23:50.78:2158,51,0	0/0:28,0:28:75.26:0,75,5111	0/0:22,0:22:57.20:0,57,3606	0/0:19,0:19:45.15:0,45,2805	0/0:16,0:16:45.15:0,45,2956	0/0:21,0:21:33.11:0,33,3350	0/0:21,0:21:42.14:0,42,2791	0/0:24,0:24:57.20:0,57,3569	0/0:20,0:20:45.09:0,45,2297	1/1:7,12:19:30.10:1270,30,0	1/1:7,18:25:45.15:1865,45,0	1/1:8,2:10:2.23:126,2,0	0/0:20,0:20:57.20:0,57,3565	0/1:10,11:21:99:1259,0,181	0/0:38,0:37:93.32:0,93,6212	1/1:11,5:16:18.06:762,18,0
chr10	67717632	.	CTCA	C	4645.83	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=12.674;DP=754;FS=0.841;HRun=0;HaplotypeScore=106.8930;InbreedingCoeff=0.9997;MQ=82.11;MQ0=0;MQRankSum=-4.326;QD=42.23;ReadPosRankSum=1.847;VQSLOD=6.1000;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,141,3149	0/0:9,0:9:27.09:0,27,609	0/0:21,0:21:53.99:0,54,1101	0/0:25,0:25:66.23:0,66,1415	0/0:32,0:32:96.33:0,96,2175	0/0:34,0:34:99:0,99,2203	0/0:29,0:29:84.27:0,84,1857	0/0:37,0:37:99:0,102,2229	0/0:13,0:13:39.13:0,39,884	0/0:20,0:20:60.20:0,60,1299	0/0:24,0:24:72.25:0,72,1593	0/0:27,0:27:81.28:0,81,1833	1/1:4,26:30:66.23:1099,66,0	0/0:25,0:25:66.23:0,66,1496	0/0:24,0:24:69.22:0,69,1501	0/0:29,0:29:75.24:0,75,1633	0/0:24,0:24:69.24:0,69,1560	0/0:19,0:19:54.19:0,54,1183	0/0:23,0:23:66.23:0,66,1475	0/0:38,0:38:99:0,108,2401	0/0:28,0:28:78.27:0,78,1745	1/1:2,25:27:75.26:1249,75,0	1/1:1,30:31:81.28:1349,81,0	1/1:1,21:22:57.19:949,57,0	0/0:24,0:24:72.23:0,72,1580	0/0:28,0:28:72.25:0,72,1629	0/0:48,0:48:99:0,135,3033	0/0:13,0:13:39.13:0,39,884
chr10	67718207	.	A	AGATT	23313.17	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-10.514;DP=721;FS=0.496;HRun=0;HaplotypeScore=99.7905;InbreedingCoeff=0.9880;MQ=69.25;MQ0=1;MQRankSum=-1.972;QD=39.72;ReadPosRankSum=5.914;VQSLOD=4.8421;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,27:37:63.22:1513,63,0	0/0:5,0:5:12.03:0,12,169	0/0:26,0:24:33.02:0,33,461	0/0:26,0:26:33.53:0,34,449	1/1:12,19:32:57.16:1318,57,0	1/1:10,15:26:36.12:861,36,0	1/1:9,11:22:24.08:577,24,0	0/0:36,0:36:44.85:0,45,600	1/1:12,12:25:30.10:708,30,0	1/1:13,25:40:87.27:1940,87,0	1/1:13,18:32:56.98:1134,57,0	1/1:8,16:25:36.12:864,36,0	1/1:8,16:24:39.13:937,39,0	1/1:6,6:14:15.05:350,15,0	1/1:10,25:37:69.15:1638,69,0	1/1:7,18:27:45.14:1081,45,0	0/0:20,0:20:36.05:0,36,522	0/0:21,0:21:30.07:0,30,445	1/1:14,13:27:39.13:878,39,0	1/1:5,17:23:51.14:1174,51,0	1/1:8,19:30:48.16:1140,48,0	1/1:4,15:19:39.09:885,39,0	1/1:5,17:24:43.30:907,43,0	1/1:7,24:32:57.20:1369,57,0	1/1:4,14:18:42.14:1009,42,0	1/1:11,23:35:72.23:1597,72,0	1/1:12,14:27:45.11:1013,45,0	1/1:5,5:10:18.06:422,18,0
chr10	67721575	.	ACC	A	696.57	PASS	AB=1.000;AC=5;AF=0.104;AN=48;BaseQRankSum=-5.075;DP=147;FS=0.000;HRun=10;HaplotypeScore=32.9293;InbreedingCoeff=0.2628;MQ=109.61;MQ0=1;MQRankSum=0.648;QD=16.58;ReadPosRankSum=5.434;VQSLOD=0.3152;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:7:9.50:0,10,144	0/0:5,0:5:3.01:0,3,38	0/0:18,0:12:25.92:0,26,267	0/1:15,0:12:10.79:11,0,103	0/0:4,0:4:5.51:0,6,56	0/0:0,0:1:2.99:0,3,23	0/0:8,0:12:10.59:0,11,103	0/0:2,0:5:9.02:0,9,103	0/0:1,0:6:15.35:0,15,68	0/0:2,0:3:2.99:0,3,24	0/0:0,0:2:3.01:0,3,30	0/0:1,0:1:2.68:0,3,11	0/0:2,0:2:6.02:0,6,78	./.	./.	0/0:4,0:6:5.70:0,6,68	0/0:2,0:4:2.96:0,3,29	0/0:2,0:3:3:0,3,29	./.	0/0:1,0:2:2.98:0,3,22	0/0:6,0:8:3:0,3,29	./.	0/0:3,0:3:3.01:0,3,47	0/0:2,0:2:3:0,3,29	0/0:3,0:5:12.01:0,12,126	1/1:2,15:17:45.12:502,45,0	0/0:5,0:5:5.98:0,6,61	1/1:0,9:9:27.07:301,27,0
chr10	67721992	.	TC	T	1749.94	PASS	AB=1.000;AC=12;AF=0.214;AN=56;BaseQRankSum=-4.410;DP=616;FS=10.011;HRun=9;HaplotypeScore=165.7828;InbreedingCoeff=0.7329;MQ=73.79;MQ0=0;MQRankSum=-0.121;QD=11.22;ReadPosRankSum=0.855;VQSLOD=1.3259;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:49:99:0,102,607	1/1:10,0:10:3.03:12,3,0	0/0:23,0:23:56.81:0,57,579	0/0:21,0:19:27.41:0,27,347	0/0:23,0:24:56.87:0,57,367	0/0:25,0:25:67.04:0,67,387	0/0:29,0:30:53.26:0,53,333	0/0:16,0:16:4.51:0,5,58	0/0:20,0:20:42.85:0,43,254	0/0:27,0:28:48.23:0,48,266	0/0:11,0:11:29.16:0,29,167	0/0:21,0:21:49.18:0,49,311	1/1:2,23:24:63.03:576,63,0	0/0:25,0:25:65.32:0,65,403	0/0:20,0:20:43.96:0,44,233	0/0:15,0:15:34.85:0,35,193	0/1:39,0:39:17.83:38,0,18	0/1:26,0:26:7.34:35,0,7	0/0:14,0:14:25.50:0,25,130	0/0:13,0:13:38.17:0,38,235	0/0:40,0:42:79.82:0,80,485	1/1:2,19:21:48.01:439,48,0	1/1:0,9:9:23.99:220,24,0	1/1:2,24:26:66.04:604,66,0	0/0:8,0:8:8.68:0,9,91	0/0:20,0:20:40.35:0,40,222	0/0:26,0:26:51.09:0,51,323	0/0:8,0:8:22.64:0,23,134
chr10	67721997	.	C	CA	1178.32	PASS	AB=0.684;AC=7;AF=0.125;AN=56;BaseQRankSum=5.661;DP=605;FS=0.000;HRun=0;HaplotypeScore=171.8373;InbreedingCoeff=0.7972;MQ=73.55;MQ0=0;MQRankSum=-3.207;QD=13.86;ReadPosRankSum=-0.212;VQSLOD=4.3511;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:51.48:0,51,436	1/1:3,7:10:12.66:170,13,0	0/0:25,0:24:61.12:0,61,810	0/0:19,0:18:19.79:0,20,460	0/0:24,0:24:52.53:0,53,308	0/0:26,0:26:67.81:0,68,296	0/0:30,0:30:70.67:0,71,300	0/1:7,6:13:16.93:127,0,17	0/0:19,0:19:43.77:0,44,213	0/0:29,0:29:24.79:0,25,176	0/0:11,0:11:27.44:0,27,128	0/0:24,0:24:37.71:0,38,233	0/0:25,0:24:64.70:0,65,398	0/0:26,0:26:69:0,69,359	0/0:17,0:17:18.40:0,18,142	0/0:13,0:13:35.14:0,35,148	1/1:11,26:37:33.04:563,33,0	1/1:3,22:25:38.13:464,38,0	0/0:15,0:15:7.20:0,7,115	0/0:14,0:14:38.68:0,39,182	0/0:41,0:41:89.07:0,89,415	0/0:22,0:22:56.05:0,56,364	0/0:9,0:9:23.54:0,24,143	0/0:25,0:25:67.71:0,68,419	0/0:8,0:8:14.75:0,15,72	0/0:19,0:19:21.27:0,21,139	0/0:24,0:24:33.55:0,34,243	0/0:8,0:8:21.82:0,22,120
chr10	67721998	.	C	CA	1277.32	PASS	AB=0.967;AC=15;AF=0.268;AN=56;BaseQRankSum=3.411;DP=600;FS=3.460;HRun=0;HaplotypeScore=168.2144;InbreedingCoeff=0.1545;MQ=72.74;MQ0=0;MQRankSum=-2.353;QD=5.01;ReadPosRankSum=-4.837;VQSLOD=2.7725;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:15.73:0,16,251	1/1:3,7:10:19.05:177,19,0	0/0:24,0:23:60.05:0,60,771	0/0:19,0:17:17.52:0,18,431	0/0:24,0:24:33.17:0,33,226	0/1:26,0:26:6.48:6,0,121	0/1:30,0:30:25.77:26,0,126	0/1:8,6:14:22.47:92,0,22	0/1:19,0:19:1.27:1,0,107	0/1:27,0:27:25.97:26,0,76	0/1:11,0:11:21.28:21,0,50	0/1:24,0:24:19.26:19,0,110	0/0:25,0:24:64.34:0,64,384	0/0:26,0:26:3.29:0,3,182	0/0:16,0:16:13.41:0,13,92	0/0:13,0:13:8.25:0,8,68	1/1:10,26:36:42.73:548,43,0	1/1:3,22:25:32.61:437,33,0	0/1:14,0:14:54.38:70,0,54	0/0:14,0:14:5.64:0,6,84	0/0:41,0:41:16.46:0,16,209	0/0:22,0:22:55.77:0,56,353	0/0:9,0:9:23.40:0,23,139	0/0:25,0:25:67.34:0,67,407	0/0:9,0:9:3.57:0,4,36	0/1:19,0:19:20.93:21,0,64	0/0:24,0:24:56.45:0,56,229	0/0:8,0:8:20.45:0,20,98
chr10	67724211	.	CT	C	393.42	PASS	AB=0.618;AC=7;AF=0.125;AN=56;BaseQRankSum=6.317;DP=476;FS=3.652;HRun=11;HaplotypeScore=51.9333;InbreedingCoeff=0.7409;MQ=77.06;MQ0=5;MQRankSum=-0.912;QD=9.37;ReadPosRankSum=3.487;VQSLOD=2.2657;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:81.02:0,81,833	0/0:7,0:7:17.99:0,18,172	0/0:23,0:14:11.62:0,12,95	0/0:23,0:13:6.18:0,6,175	0/0:24,0:24:57.08:0,57,575	0/0:16,2:18:23.44:0,23,439	0/0:21,0:21:54.10:0,54,558	0/0:30,0:31:72.15:0,72,752	0/0:17,0:17:44.86:0,45,433	0/0:20,1:21:29.46:0,29,493	0/0:7,0:7:15.04:0,15,160	0/0:15,0:15:39.10:0,39,413	0/1:8,13:21:54:229,0,54	0/0:14,0:14:27.06:0,27,282	0/0:15,0:15:39.06:0,39,393	0/0:16,0:16:39.09:0,39,409	0/0:22,0:22:57.14:0,57,607	0/0:29,0:29:72.18:0,72,767	0/0:12,0:12:29.79:0,30,291	0/0:13,0:13:36.04:0,36,365	0/0:19,0:19:24.25:0,24,420	1/1:1,5:6:11.98:99,12,0	1/1:3,2:4:5.99:49,6,0	1/1:2,7:10:20.01:154,20,0	0/0:8,0:8:21.05:0,21,224	0/0:17,0:17:33.05:0,33,332	0/0:13,0:13:33.06:0,33,337	0/0:16,0:16:32.99:0,33,304
chr10	67726977	.	T	TC	4939.16	PASS	AB=0.756;AC=36;AF=0.643;AN=56;BaseQRankSum=14.342;DP=644;FS=2.401;HRun=4;HaplotypeScore=188.7383;InbreedingCoeff=0.3180;MQ=67.41;MQ0=1;MQRankSum=-13.358;QD=10.00;ReadPosRankSum=2.199;VQSLOD=2.3685;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:22,13:35:11.32:217,0,11	1/1:4,6:10:26.78:205,27,0	0/0:20,0:18:42.08:0,42,451	0/0:24,0:24:56.77:0,57,575	1/1:7,6:15:2.10:56,2,0	1/1:3,12:15:14.63:224,15,0	1/1:26,16:43:1.04:331,1,0	0/1:17,3:20:62.55:129,0,63	0/1:12,12:25:6.98:254,0,7	1/1:13,14:27:31.40:346,31,0	1/1:3,3:8:4.75:65,5,0	1/1:14,12:26:8.05:277,8,0	0/0:33,0:33:84.21:0,84,935	1/1:7,28:35:57.06:511,57,0	1/1:14,17:31:30.93:409,31,0	1/1:7,18:29:41.91:367,42,0	0/1:19,6:25:70.04:70,0,93	1/1:10,13:23:23.94:291,24,0	0/1:12,6:19:12.58:144,0,13	1/1:9,8:17:35.87:228,36,0	0/1:21,5:26:25.72:49,0,26	0/0:20,0:20:60.17:0,60,680	0/0:20,0:20:48.13:0,48,544	0/0:33,0:33:96.27:0,96,1088	1/1:5,12:18:40.10:272,40,0	0/1:12,6:18:33.01:127,0,33	1/1:4,15:21:24.86:299,25,0	0/1:4,4:8:16.80:66,0,17
chr10	67726982	.	A	ACCCCC	21172.41	PASS	AB=0.713;AC=27;AF=0.482;AN=56;BaseQRankSum=9.197;DP=627;FS=1.362;HRun=4;HaplotypeScore=175.7214;InbreedingCoeff=-0.1612;MQ=67.77;MQ0=1;MQRankSum=-14.310;QD=43.74;ReadPosRankSum=8.534;VQSLOD=0.9303;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:19,13:32:99:1127,0,113	0/1:5,5:10:10.40:524,0,10	0/0:16,0:14:35.24:0,35,772	0/0:24,0:25:65.91:0,66,930	0/1:8,6:14:38.14:266,0,38	1/1:2,12:14:19.12:985,19,0	0/1:21,16:37:67.03:1681,0,67	0/1:20,3:23:98.32:633,0,98	0/1:14,12:26:38.09:1205,0,38	0/1:12,14:26:10.47:1128,0,10	0/1:5,3:8:3.68:217,0,4	0/1:15,12:27:83.19:1110,0,83	0/0:29,0:29:87.23:0,87,1739	1/1:7,28:35:18.55:2161,19,0	0/1:14,17:31:13.34:1688,0,13	1/1:9,18:27:35.49:1773,35,0	0/1:17,6:23:99:435,0,117	1/1:10,13:23:5.38:1213,5,0	0/1:15,6:21:20.13:898,0,20	0/1:7,8:15:33.81:612,0,34	0/1:19,5:24:59.90:362,0,60	0/0:22,0:22:60.04:0,60,1279	0/0:17,0:17:51.15:0,51,1061	0/0:34,0:34:99:0,102,2090	1/1:6,12:18:15.73:1019,16,0	0/1:11,6:17:84.28:564,0,84	0/1:11,15:26:0.08:1270,0,0	0/1:3,4:7:21.96:299,0,22
chr10	67726983	.	A	ACCCCCA	27857.29	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-4.136;DP=624;FS=1.307;HRun=0;HaplotypeScore=164.3071;InbreedingCoeff=0.9730;MQ=67.37;MQ0=1;MQRankSum=-13.982;QD=57.56;ReadPosRankSum=0.939;VQSLOD=4.7278;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:28,5:34:48.15:1449,48,0	1/1:9,0:10:21.07:702,21,0	0/0:16,0:14:36.06:0,36,705	0/0:24,0:24:39.04:0,39,611	1/1:14,0:14:12.04:338,12,0	1/1:14,0:14:39.13:1243,39,0	1/1:36,0:36:75.23:2156,75,0	1/1:25,0:25:30.09:788,30,0	1/1:25,0:25:54.17:1636,54,0	1/1:23,1:25:48.16:1531,48,0	1/1:7,0:7:9.03:257,9,0	1/1:23,3:27:48.16:1517,48,0	0/0:27,0:27:72.19:0,72,1481	1/1:35,0:35:90.27:2933,90,0	1/1:31,0:31:72.22:2279,72,0	1/1:27,0:27:69.24:2190,69,0	1/1:23,0:23:26.98:607,27,0	1/1:24,0:24:51.12:1543,51,0	1/1:21,0:21:45.08:1118,45,0	1/1:15,0:15:27.09:857,27,0	1/1:24,0:24:18.43:440,18,0	0/0:22,0:22:54.15:0,54,1091	0/0:17,0:17:45.13:0,45,949	0/0:34,0:34:90.26:0,90,1860	1/1:16,0:17:42.14:1367,42,0	1/1:17,0:17:27.07:812,27,0	1/1:26,0:26:60.09:1694,60,0	1/1:7,0:7:12.04:401,12,0
chr10	67727317	.	AAC	A	20195.90	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=5.390;DP=729;FS=4.968;HRun=0;HaplotypeScore=95.7889;InbreedingCoeff=0.9868;MQ=76.30;MQ0=5;MQRankSum=-3.783;QD=34.23;ReadPosRankSum=1.975;VQSLOD=7.3753;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,44:48:99:1649,120,0	1/1:0,6:6:15.05:206,15,0	0/0:13,0:13:36.11:0,36,612	0/0:14,0:15:39.01:0,39,600	1/1:2,11:13:27.09:371,27,0	1/1:1,22:23:63.21:866,63,0	1/1:2,40:42:99:1401,102,0	1/1:2,33:35:99:1312,99,0	1/1:4,27:31:69.23:948,69,0	1/1:4,13:17:45.11:587,45,0	1/1:4,8:12:15.01:206,15,0	1/1:1,39:40:99:1525,111,0	0/0:36,0:36:99:0,99,1732	1/1:1,35:36:96.32:1319,96,0	1/1:1,34:35:90.30:1237,90,0	1/1:0,18:17:42.14:577,42,0	1/1:1,35:35:93.31:1278,93,0	1/1:1,38:38:99:1360,99,0	1/1:1,17:18:51.17:700,51,0	1/1:5,12:16:27.09:370,27,0	1/1:3,59:61:99:2205,162,0	0/0:16,0:16:45.14:0,45,770	0/0:12,0:12:33.11:0,33,561	0/0:47,0:47:99:0,126,2195	1/1:2,11:13:30.06:391,30,0	1/1:2,18:20:54.18:741,54,0	1/1:2,22:24:56.85:783,57,0	1/1:0,5:5:12.04:165,12,0
chr10	67729773	.	T	TA	1229.55	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-0.144;DP=599;FS=4.264;HRun=1;HaplotypeScore=124.5719;InbreedingCoeff=0.9950;MQ=91.75;MQ0=0;MQRankSum=-6.665;QD=34.15;ReadPosRankSum=-2.726;VQSLOD=2.6038;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:75.24:0,75,973	0/0:10,0:10:24.08:0,24,312	0/0:22,0:22:63.19:0,63,784	0/0:27,0:27:75.18:0,75,920	0/0:11,0:11:33.09:0,33,414	0/0:14,0:14:42.14:0,42,545	0/0:24,0:24:66.18:0,66,827	0/0:35,0:35:90.29:0,90,1165	0/0:15,0:15:39.09:0,39,488	0/0:17,0:17:42.14:0,42,545	0/0:11,0:11:27.09:0,27,350	0/0:36,0:36:99:0,99,1284	0/0:26,0:26:78.25:0,78,1012	0/0:24,0:24:69.22:0,69,895	0/0:30,0:30:84.27:0,84,1091	0/0:29,0:29:84.27:0,84,1090	0/0:24,0:24:72.21:0,72,919	0/0:20,0:20:54.18:0,54,701	0/0:17,0:17:47.37:0,47,590	0/0:18,0:18:54.15:0,54,672	0/0:42,0:42:99:0,111,1408	0/0:11,0:11:24.08:0,24,311	0/0:12,0:12:23.93:0,24,311	0/0:20,0:20:54.18:0,54,701	0/0:13,0:13:39.10:0,39,489	1/1:4,18:22:24.24:824,24,0	0/0:29,0:29:81.26:0,81,1049	1/1:6,8:14:42.07:527,42,0
chr10	67731729	.	T	TA	11636.55	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-13.987;DP=662;FS=8.530;HRun=1;HaplotypeScore=68.9495;InbreedingCoeff=0.9999;MQ=83.75;MQ0=0;MQRankSum=-2.352;QD=39.58;ReadPosRankSum=3.093;VQSLOD=5.3682;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,123,1597	0/0:11,0:11:33.11:0,33,428	0/0:21,0:21:56.93:0,57,693	0/0:18,0:18:44.50:0,45,543	0/0:19,0:19:36.12:0,36,467	1/1:0,19:19:48.16:720,48,0	1/1:1,26:27:66.22:989,66,0	0/0:22,0:22:63.19:0,63,793	0/0:29,0:29:87.27:0,87,1115	1/1:0,16:16:48.16:718,48,0	1/1:0,17:17:39.13:584,39,0	1/1:0,22:22:54.18:809,54,0	0/0:30,0:30:84.27:0,84,1090	1/1:0,33:33:90.30:1348,90,0	1/1:0,23:23:66.22:989,66,0	1/1:0,22:22:66.22:989,66,0	0/0:44,0:44:99:0,132,1713	0/0:36,0:36:99:0,105,1363	1/1:0,12:12:36.12:540,36,0	1/1:0,12:12:36.09:515,36,0	1/1:3,44:47:99:1817,101,0	0/0:14,0:14:39.13:0,39,506	0/0:18,0:18:54.18:0,54,700	0/0:25,0:25:75.24:0,75,973	1/1:2,19:21:51.17:764,51,0	0/0:24,0:24:72.23:0,72,934	1/1:0,23:22:57.06:853,57,0	0/0:15,0:15:45.15:0,45,581
chr10	67732029	.	C	CCCTGGTAG	41226.21	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=-5.778;DP=579;FS=2.771;HRun=0;HaplotypeScore=144.5940;InbreedingCoeff=0.9964;MQ=78.56;MQ0=0;MQRankSum=-15.316;QD=94.56;ReadPosRankSum=-0.860;VQSLOD=5.4872;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,23:32:72.25:3035,72,0	1/1:3,6:10:24.08:915,24,0	0/0:28,0:28:69.21:0,69,1687	0/0:20,0:19:48.13:0,48,1104	1/1:7,13:20:39.13:1638,39,0	1/1:9,7:16:39.13:1527,39,0	1/1:7,16:23:63.22:2587,63,0	1/1:28,15:48:99:4334,123,0	0/0:17,0:17:48.16:0,48,1290	1/1:3,8:18:39.13:1533,39,0	1/1:4,13:19:42.14:1763,42,0	1/1:7,13:22:54.19:2231,54,0	0/0:26,0:26:72.25:0,72,1931	1/1:6,18:25:63.22:2620,63,0	1/1:7,17:25:63.22:2616,63,0	1/1:3,12:15:36.12:1434,36,0	1/1:10,18:28:54.21:2409,54,0	1/1:7,7:15:36.12:1528,36,0	1/1:9,6:16:45.15:1641,45,0	1/1:4,10:14:36.12:1448,36,0	1/1:13,9:26:26.71:1161,27,0	0/0:16,0:16:45.15:0,45,1221	0/0:12,0:12:36.12:0,36,951	0/0:24,0:24:57.20:0,57,1527	1/1:3,16:19:51.18:2102,51,0	1/1:4,11:19:57.16:2105,57,0	1/1:5,3:9:15.05:651,15,0	1/1:3,11:16:45.15:1947,45,0
chr10	67732400	.	C	CGTTGTT	11173.07	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=9.499;DP=677;FS=1.473;HRun=0;HaplotypeScore=142.2033;InbreedingCoeff=0.9431;MQ=56.13;MQ0=4;MQRankSum=-10.138;QD=24.61;ReadPosRankSum=-5.303;VQSLOD=3.7486;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:17,15:34:17.98:579,18,0	1/1:8,0:12:21.06:525,21,0	0/0:36,0:25:14.75:0,15,181	0/0:36,0:28:17.90:0,18,250	1/1:10,14:26:36.08:953,36,0	1/1:16,0:16:27.09:793,27,0	1/1:18,0:18:6.02:141,6,0	1/1:30,0:30:27.76:286,28,0	1/1:21,0:21:30.06:651,30,0	1/1:29,0:29:54.07:1204,54,0	1/1:11,1:12:18.06:498,18,0	1/1:29,0:29:42.14:1168,42,0	0/0:21,0:21:42.14:0,42,833	1/1:23,0:23:24.08:709,24,0	1/1:34,0:34:36.12:1002,36,0	1/1:26,0:26:15.05:403,15,0	1/1:20,0:20:13.27:211,13,0	1/1:12,1:24:18.06:433,18,0	1/1:25,0:22:20.90:316,21,0	1/1:9,0:9:6.02:131,6,0	1/1:23,0:23:20.65:325,21,0	0/0:25,0:25:54.18:0,54,1053	0/0:20,0:20:51.16:0,51,955	0/0:35,0:35:84.26:0,84,1605	1/1:23,0:23:15.05:456,15,0	0/0:30,0:30:48.13:0,48,875	1/1:19,0:18:15.05:389,15,0	0/0:20,0:20:42.14:0,42,867
chr10	67732430	.	T	TGTTGTTTTG	14814.47	PASS	AB=0.996;AC=34;AF=0.607;AN=56;BaseQRankSum=-2.981;DP=740;FS=1.151;HRun=0;HaplotypeScore=137.9126;InbreedingCoeff=0.5177;MQ=53.05;MQ0=9;MQRankSum=-6.969;QD=29.28;ReadPosRankSum=4.046;VQSLOD=4.1345;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:32,0:31:99:226,0,444	0/1:14,0:14:99:129,0,293	0/0:42,0:18:47.93:0,48,617	0/0:36,0:25:47.58:0,48,713	0/1:26,0:26:99:455,0,406	1/1:0,12:16:27.09:1269,27,0	1/1:1,14:18:3.01:124,3,0	0/1:36,0:37:99:116,0,663	1/1:1,0:23:29.91:629,30,0	1/1:6,18:34:87.17:2187,87,0	1/1:2,16:22:42.14:1105,42,0	1/1:2,26:37:42.14:1999,42,0	0/0:19,0:19:51.17:0,51,1388	1/1:1,24:29:24.08:1198,24,0	1/1:0,31:35:36.12:1743,36,0	1/1:1,19:25:15.05:624,15,0	0/0:15,0:22:29.30:0,29,455	0/1:17,0:17:99:193,0,229	1/1:8,1:19:44.86:800,45,0	1/1:1,0:10:12.04:343,12,0	1/1:7,0:29:21.06:296,21,0	0/0:30,0:30:90.27:0,90,1892	0/0:24,0:24:66.17:0,66,1379	0/0:39,0:39:99:0,105,2724	1/1:1,20:28:15.05:699,15,0	0/1:26,0:26:21.38:21,0,1274	1/1:0,0:19:15.05:656,15,0	0/0:21,0:21:63.21:0,63,1477
chr10	67735935	.	TA	T	945.46	PASS	AB=0.882;AC=10;AF=0.179;AN=56;BaseQRankSum=4.532;DP=527;FS=2.127;HRun=14;HaplotypeScore=58.7635;InbreedingCoeff=0.6281;MQ=56.95;MQ0=9;MQRankSum=-0.251;QD=6.80;ReadPosRankSum=0.771;VQSLOD=2.4614;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:38,4:43:39.98:0,40,759	1/1:2,6:8:6.87:75,7,0	0/0:7,0:2:2.97:0,3,20	0/0:2,0:1:2.99:0,3,24	0/0:27,1:29:27.03:0,27,411	0/0:26,1:27:42.44:0,42,524	0/0:11,0:10:15.02:0,15,139	1/1:19,19:35:27.85:319,28,0	0/0:12,0:13:29.61:0,30,248	0/0:16,0:17:17.50:0,18,260	0/1:19,3:24:7.73:8,0,307	0/0:15,0:15:27.92:0,28,253	0/0:10,1:11:6.41:0,6,189	0/0:9,0:9:23.99:0,24,213	0/0:12,1:13:3.39:0,3,162	0/1:11,2:14:5.29:5,0,229	1/1:4,20:25:54.60:361,55,0	1/1:5,22:28:49.42:335,49,0	0/0:16,1:18:13.76:0,14,254	0/0:24,2:27:11.99:0,12,407	0/0:7,0:7:15:0,15,132	0/0:5,0:5:11.99:0,12,104	0/0:10,0:10:15.43:0,15,164	0/0:13,1:14:18.27:0,18,289	0/0:21,2:23:27.34:0,27,384	0/0:21,2:23:21.44:0,21,334	0/0:24,2:27:20.46:0,20,431	0/0:30,1:32:29.46:0,29,429
chr10	67736128	.	G	GTT	1325.12	PASS	AB=0.571;AC=9;AF=0.167;AN=54;BaseQRankSum=-4.499;DP=603;FS=4.881;HRun=2;HaplotypeScore=72.5498;InbreedingCoeff=0.8208;MQ=73.93;MQ0=1;MQRankSum=-1.762;QD=37.86;ReadPosRankSum=-2.181;VQSLOD=3.0180;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:93.29:0,93,1348	0/0:9,0:9:27.09:0,27,398	0/0:16,0:15:45.15:0,45,657	0/0:25,0:24:63.17:0,63,906	0/0:17,0:17:42.12:0,42,598	0/0:23,0:23:66.22:0,66,972	0/0:24,0:24:72.21:0,72,1020	0/0:34,0:33:99:0,99,1440	0/0:23,0:23:66.22:0,66,971	0/0:28,0:28:81.27:0,81,1193	0/0:24,0:24:72.24:0,72,1060	0/0:27,0:27:81.27:0,81,1192	1/1:1,8:9:24.08:447,24,0	0/0:23,0:23:63.20:0,63,908	0/0:42,0:42:99:0,120,1744	0/0:30,0:30:90.30:0,90,1321	0/0:32,0:32:93.29:0,93,1343	0/0:27,0:27:81.27:0,81,1181	0/0:22,0:22:60.20:0,60,880	0/0:19,0:18:51.17:0,51,751	0/0:34,0:34:99:0,99,1430	1/1:0,3:3:9.03:168,9,0	./.	1/1:0,7:7:15.05:281,15,0	0/0:14,0:14:42.14:0,42,616	0/1:3,9:12:13.78:468,0,14	0/0:42,0:42:99:0,126,1851	1/1:1,3:3:6.02:112,6,0
chr10	67742382	.	AACAGAGGG	A	11610.04	PASS	AB=0.733;AC=39;AF=0.696;AN=56;BaseQRankSum=8.060;DP=736;FS=9.712;HRun=0;HaplotypeScore=217.6967;InbreedingCoeff=0.8613;MQ=68.45;MQ0=2;MQRankSum=-8.177;QD=21.54;ReadPosRankSum=1.466;VQSLOD=2.8765;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:69.20:0,69,2564	0/0:3,0:5:12.04:0,12,368	0/0:24,0:19:18.03:0,18,466	0/0:31,0:29:24.94:0,25,604	0/0:19,0:19:33.11:0,33,1198	1/1:4,9:13:21.07:528,21,0	1/1:31,18:49:26.67:480,27,0	0/0:23,0:23:24.07:0,24,678	1/1:12,19:31:44.74:1052,45,0	1/1:15,13:28:38.90:818,39,0	1/1:4,2:6:1.24:27,1,0	1/1:17,24:41:59.88:1345,60,0	1/1:8,12:20:30.10:740,30,0	1/1:22,19:41:45.15:1116,45,0	1/1:17,18:35:42.14:1056,42,0	1/1:15,17:32:45.15:1076,45,0	0/0:15,0:20:24.08:0,24,534	0/0:20,0:27:33.10:0,33,859	1/1:7,3:10:9.03:226,9,0	1/1:12,3:15:9.03:206,9,0	1/1:38,24:61:14.51:169,15,0	1/1:9,14:23:20.82:337,21,0	1/1:5,6:11:5.36:150,5,0	0/1:28,16:44:0.80:49,0,1	1/1:8,10:18:14.84:314,15,0	1/1:13,6:19:18.06:412,18,0	1/1:11,21:32:48.16:1207,48,0	1/1:2,7:9:12.04:302,12,0
chr10	67742659	.	TGTTCCC	T	2780.44	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=9.259;DP=634;FS=5.686;HRun=0;HaplotypeScore=132.9839;InbreedingCoeff=0.9868;MQ=93.77;MQ0=0;MQRankSum=-8.430;QD=41.50;ReadPosRankSum=-0.470;VQSLOD=2.8396;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,114,3885	1/1:0,4:4:12.04:287,12,0	0/0:36,0:36:99:0,105,3288	0/0:22,0:22:63.21:0,63,2023	0/0:22,0:22:63.22:0,63,2104	0/0:21,0:21:60.20:0,60,1960	0/0:21,0:21:63.22:0,63,2190	1/1:2,21:24:66.20:1437,66,0	0/0:27,0:27:81.28:0,81,2846	0/0:23,0:23:69.07:0,69,2213	0/0:15,0:15:42.14:0,42,1415	0/0:25,0:25:72.25:0,72,2338	0/0:26,0:26:78.25:0,78,2647	0/0:22,0:22:66.19:0,66,2185	0/0:24,0:24:69.24:0,69,2429	0/0:24,0:24:72.25:0,72,2495	1/1:1,18:19:36:853,36,0	1/1:7,13:20:15.05:360,15,0	0/0:20,0:20:57.19:0,57,1832	0/0:15,0:15:42.13:0,42,1393	0/0:32,0:32:96.33:0,96,3410	0/0:21,0:21:60.21:0,60,2088	0/0:22,0:22:63.22:0,63,2031	0/0:24,0:24:72.25:0,72,2395	0/0:24,0:24:69.24:0,69,2486	0/0:19,0:19:54.19:0,54,1855	0/0:26,0:27:78.09:0,78,2500	0/0:16,0:16:48.16:0,48,1704
chr10	67743027	.	C	CT	3488.24	PASS	AB=0.716;AC=32;AF=0.571;AN=56;BaseQRankSum=-2.534;DP=585;FS=5.154;HRun=13;HaplotypeScore=72.3355;InbreedingCoeff=0.5638;MQ=71.34;MQ0=7;MQRankSum=1.949;QD=9.50;ReadPosRankSum=0.531;VQSLOD=3.0144;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:49.56:0,50,334	0/0:7,0:7:11.88:0,12,82	0/0:43,0:17:8.17:0,8,83	0/0:29,0:16:7.50:0,8,94	0/0:23,1:27:25.76:0,26,292	0/1:6,11:19:10.33:117,0,10	1/1:4,16:22:34.95:343,35,0	0/0:23,1:24:28.44:0,28,201	0/0:19,0:19:38.98:0,39,279	1/1:4,16:21:6.77:322,7,0	0/1:10,8:18:1.17:104,0,1	0/1:8,10:19:0.75:132,0,1	1/1:12,0:12:8.49:41,8,0	1/1:2,13:15:18.02:167,18,0	1/1:5,12:18:26.19:273,26,0	1/1:5,11:17:11.51:223,12,0	0/0:24,0:26:63.09:0,63,398	0/0:20,0:20:29.50:0,30,203	0/1:6,10:16:0.40:240,0,0	0/1:11,7:18:11.20:182,0,11	1/1:5,15:20:12.44:255,12,0	1/1:16,0:16:8.07:112,8,0	1/1:23,0:23:14.54:144,15,0	1/1:28,1:28:23.09:218,23,0	1/1:5,12:18:14.18:161,14,0	1/1:19,0:19:5.41:96,5,0	1/1:14,16:32:2.73:279,3,0	0/1:13,0:13:8.88:79,0,9
chr10	67743040	.	T	TTC	2068.95	PASS	AB=1.000;AC=16;AF=0.286;AN=56;BaseQRankSum=-3.130;DP=574;FS=11.749;HRun=0;HaplotypeScore=87.1651;InbreedingCoeff=0.6278;MQ=76.82;MQ0=9;MQRankSum=2.527;QD=10.45;ReadPosRankSum=1.184;VQSLOD=2.6537;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:71.84:0,72,786	0/0:5,0:5:12.04:0,12,154	0/0:49,0:24:24.76:0,25,300	0/1:30,0:17:17.89:18,0,120	0/0:23,0:23:65.29:0,65,673	0/0:16,0:16:26.21:0,26,158	0/0:22,0:22:27.50:0,27,172	0/0:19,0:19:44.84:0,45,473	0/0:23,0:23:65.88:0,66,686	0/1:21,0:21:44.62:45,0,184	0/1:12,0:12:4.61:5,0,63	0/0:17,0:17:15.62:0,16,165	1/1:0,7:10:9.34:121,9,0	0/0:14,0:14:13.62:0,14,45	0/0:16,0:16:38.37:0,38,198	0/0:19,0:19:31.07:0,31,215	0/0:25,0:25:74.91:0,75,818	0/0:20,0:20:38.89:0,39,438	0/1:23,0:23:36.03:36,0,253	0/0:17,0:17:17.78:0,18,217	0/0:21,0:21:19.88:0,20,221	1/1:1,12:15:20.61:376,21,0	1/1:2,20:22:31.80:560,32,0	1/1:4,26:30:33.47:637,33,0	0/0:17,0:17:28.91:0,29,173	1/1:5,1:17:27.76:332,28,0	0/0:28,0:28:41.49:0,41,349	1/1:2,0:15:6.53:128,7,0
chr10	67746068	.	GT	G	2591.40	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=10.111;DP=588;FS=17.081;HRun=8;HaplotypeScore=63.9823;InbreedingCoeff=0.8978;MQ=79.70;MQ0=1;MQRankSum=-1.448;QD=19.05;ReadPosRankSum=1.444;VQSLOD=2.2924;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,1:36:70.31:0,70,1115	0/0:9,0:9:27.08:0,27,316	0/0:28,1:25:32.66:0,33,524	0/1:19,0:17:30.29:30,0,185	0/0:17,0:17:48.10:0,48,552	0/0:22,0:22:60.17:0,60,713	0/0:26,0:26:69.21:0,69,833	0/0:29,0:29:67.06:0,67,767	0/0:17,0:17:39.12:0,39,471	0/0:21,0:21:54.16:0,54,642	0/0:17,0:17:51.16:0,51,613	0/0:25,0:25:72.17:0,72,840	1/1:4,21:25:51.08:492,51,0	0/0:18,0:18:45.14:0,45,544	0/0:28,0:28:81.17:0,81,930	0/0:22,0:22:66.19:0,66,787	0/0:26,0:26:69.20:0,69,821	0/0:25,0:25:69.20:0,69,819	0/0:20,0:20:51.12:0,51,592	0/0:17,0:17:42.12:0,42,497	0/0:7,0:7:21.06:0,21,254	1/1:1,18:19:48.07:463,48,0	1/1:1,13:14:39.06:377,39,0	1/1:2,18:20:51.08:493,51,0	0/0:17,1:18:19.17:0,19,513	1/1:1,19:20:57.09:550,57,0	0/0:23,0:22:63.19:0,63,760	1/1:4,14:18:39.06:377,39,0
chr10	67746602	.	T	TA	734.09	PASS	AB=0.804;AC=8;AF=0.143;AN=56;BaseQRankSum=5.908;DP=523;FS=0.000;HRun=10;HaplotypeScore=64.0025;InbreedingCoeff=0.7723;MQ=62.90;MQ0=13;MQRankSum=-0.148;QD=12.03;ReadPosRankSum=-2.408;VQSLOD=2.6040;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:32:64.85:0,65,510	0/0:6,0:6:14.98:0,15,123	0/0:19,0:14:17.88:0,18,206	0/1:12,0:10:9.88:10,0,86	0/0:23,0:22:62.56:0,63,496	0/0:23,0:23:47.91:0,48,389	0/0:10,0:10:20.80:0,21,165	0/0:35,0:31:15.43:0,15,292	0/0:20,0:20:50.91:0,51,416	0/0:16,0:17:26.47:0,26,241	0/0:11,0:11:16.98:0,17,129	0/0:13,0:13:26.94:0,27,222	1/1:5,11:16:30.08:320,30,0	0/0:14,0:14:32.91:0,33,265	0/0:21,0:22:58.94:0,59,471	0/0:13,0:13:38.86:0,39,312	0/0:32,0:32:67.92:0,68,543	0/0:27,0:27:53.88:0,54,438	0/0:18,0:18:38.87:0,39,312	0/0:22,0:22:59.91:0,60,492	0/0:10,0:10:20.97:0,21,172	1/1:1,4:5:11.99:116,12,0	1/1:3,10:13:24.06:256,24,0	0/1:5,8:14:0.72:182,0,1	0/0:24,0:23:56.89:0,57,468	0/0:29,0:28:71.87:0,72,586	0/0:23,0:22:62.92:0,63,517	0/0:14,0:14:41.95:0,42,345
chr10	67756587	.	T	TGAG	6051.92	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-11.626;DP=663;FS=1.876;HRun=0;HaplotypeScore=98.3491;InbreedingCoeff=0.9936;MQ=88.18;MQ0=0;MQRankSum=-2.875;QD=54.52;ReadPosRankSum=2.966;VQSLOD=6.7013;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:75.26:0,75,1205	0/0:12,0:12:30.10:0,30,482	0/0:23,0:23:60.12:0,60,898	0/0:34,0:34:47.74:0,48,1304	0/0:16,0:16:45.14:0,45,700	0/0:23,0:23:54.18:0,54,866	0/0:26,0:26:78.25:0,78,1229	0/0:23,0:23:63.21:0,63,1010	0/0:23,0:23:66.23:0,66,1060	0/0:25,0:25:72.24:0,72,1136	0/0:17,0:17:51.17:0,51,815	0/0:32,0:32:74.72:0,75,1133	1/1:3,20:23:60.21:1312,60,0	0/0:35,0:35:99:0,99,1587	0/0:24,0:24:63.19:0,63,985	0/0:23,0:23:60.20:0,60,964	0/0:23,0:23:69.21:0,69,1083	0/0:23,0:23:63.21:0,63,1012	0/0:14,0:14:36.09:0,36,532	0/0:18,0:18:51.17:0,51,818	0/0:46,0:46:99:0,114,1776	1/1:5,15:20:42.14:926,42,0	1/1:0,17:17:48.16:1059,48,0	1/1:3,22:26:54.66:1192,55,0	0/0:23,0:23:60.19:0,60,942	1/1:1,20:21:63.20:1298,63,0	0/0:25,0:25:60.20:0,60,958	1/1:0,4:4:12.04:265,12,0
chr10	67756642	.	A	ATC	81.11	PASS	AC=2;AF=0.037;AN=54;BaseQRankSum=3.565;DP=622;FS=2.240;HRun=0;HaplotypeScore=118.3815;InbreedingCoeff=0.7858;MQ=64.16;MQ0=20;MQRankSum=-1.969;QD=6.24;ReadPosRankSum=-1.173;VQSLOD=3.3137;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:13,0:13:17.18:0,17,183	0/0:20,0:15:35.78:0,36,337	0/0:26,0:19:44.23:0,44,358	1/1:13,0:12:20.97:173,21,0	0/0:19,0:18:26.90:0,27,218	0/0:31,0:29:44.83:0,45,357	0/0:21,0:20:54.74:0,55,455	0/0:19,0:19:12.96:0,13,244	0/0:22,0:22:55.42:0,55,464	0/0:11,0:10:23.97:0,24,197	0/0:31,0:30:53.87:0,54,435	0/0:17,0:17:38.65:0,39,287	0/0:25,0:25:53.72:0,54,415	0/0:26,0:25:38.83:0,39,302	0/0:22,0:22:32.85:0,33,263	0/0:25,0:24:11.89:0,12,354	0/0:22,0:20:5.06:0,5,327	0/0:14,0:11:29.55:0,30,229	0/0:20,0:19:35.95:0,36,297	0/0:58,0:54:98.72:0,99,789	0/0:17,0:15:23.44:0,23,185	0/0:13,0:13:20.96:0,21,169	0/0:23,0:22:17.95:0,18,143	0/0:15,0:15:26.98:0,27,227	0/0:28,0:28:14.75:0,15,374	0/0:22,0:22:47.74:0,48,365	0/0:13,0:12:11.58:0,12,70
chr10	67756644	.	CTGTGTGTGTGTGTGTGTGTGTGTG	C	3062.47	PASS	AB=0.815;AC=17;AF=0.315;AN=54;BaseQRankSum=1.310;DP=667;FS=7.159;HRun=0;HaplotypeScore=303.3193;InbreedingCoeff=0.6235;MQ=59.06;MQ0=23;MQRankSum=0.290;QD=12.20;ReadPosRankSum=2.646;VQSLOD=1.0145;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:39:3.01:0,3,316	0/0:14,0:14:15.52:0,16,754	0/0:18,0:13:3.01:0,3,42	0/0:24,0:17:3.01:0,3,40	0/0:18,0:16:12.04:0,12,897	1/1:18,0:17:3.48:96,3,0	1/1:32,0:30:6.01:143,6,0	0/0:22,0:20:10.23:0,10,300	0/0:18,0:19:19.31:0,19,1280	0/0:22,0:22:7.27:0,7,402	./.	1/1:31,1:32:12.02:478,12,0	0/0:24,0:24:42.61:0,43,2910	0/0:26,0:26:0:0,0,1	1/1:24,3:25:18.06:819,18,0	1/1:21,1:22:15.39:641,15,0	0/0:28,0:27:38.97:0,39,3060	0/0:26,0:23:39.13:0,39,2758	0/0:17,0:13:3.78:0,4,10	1/1:12,8:19:9.03:561,9,0	1/1:61,0:57:5.68:105,6,0	0/0:17,0:15:12.04:0,12,614	0/0:17,0:16:8.70:0,9,757	0/0:28,0:26:6.02:0,6,623	1/1:16,0:16:2.99:25,3,0	0/0:29,0:29:54.17:0,54,3299	0/1:17,5:22:79.50:365,0,80	0/0:14,0:13:34.89:0,35,2795
chr10	67756748	.	ATATCTC	A	732.48	PASS	AB=0.974;AC=8;AF=0.143;AN=56;BaseQRankSum=4.128;DP=464;FS=6.983;HRun=0;HaplotypeScore=112.4496;InbreedingCoeff=0.4634;MQ=68.21;MQ0=18;MQRankSum=-1.751;QD=8.93;ReadPosRankSum=1.256;VQSLOD=1.9929;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:7.95:0,8,115	0/0:3,0:3:9:0,9,205	0/0:38,0:22:54.15:0,54,1659	0/0:44,0:32:63.39:0,63,2146	0/0:8,0:8:9.28:0,9,57	0/0:13,0:12:19.31:0,19,618	0/0:27,0:27:60.52:0,61,1704	0/0:20,0:19:51.17:0,51,1458	0/1:17,0:17:22.73:131,0,23	0/0:20,0:19:57.13:0,57,1614	0/0:2,0:2:6.02:0,6,207	0/0:25,0:22:39.06:0,39,827	0/1:17,0:17:17.64:53,0,18	0/0:18,0:17:27.04:0,27,749	0/0:8,0:7:12.04:0,12,424	0/0:23,0:23:29.39:0,29,735	0/0:14,0:14:24.50:0,24,654	0/0:12,0:12:25.30:0,25,644	0/0:15,0:14:42.08:0,42,982	0/0:6,0:6:6.02:0,6,165	0/0:38,0:33:57.12:0,57,1491	0/0:7,0:7:2.94:0,3,18	0/0:3,0:3:5.99:0,6,48	1/1:27,0:27:2.72:19,3,0	0/0:9,0:7:3.01:0,3,99	1/1:6,5:12:20.10:545,20,0	0/0:14,0:14:39.11:0,39,1082	1/1:8,0:8:9:121,9,0
chr10	67756750	.	ATCTC	A	1147.83	PASS	AB=1.000;AC=14;AF=0.259;AN=54;BaseQRankSum=4.143;DP=463;FS=18.860;HRun=0;HaplotypeScore=100.0039;InbreedingCoeff=0.6100;MQ=66.78;MQ0=19;MQRankSum=-1.473;QD=11.25;ReadPosRankSum=2.354;VQSLOD=1.6210;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:15:18.03:284,18,0	0/0:2,0:2:6.01:0,6,97	0/0:38,0:22:47.63:0,48,826	0/0:41,0:30:40.37:0,40,1108	1/1:8,0:8:5.51:92,6,0	0/0:14,0:13:22.26:0,22,367	0/0:28,0:28:51.63:0,52,884	0/0:20,0:18:42.61:0,43,719	0/1:18,0:17:5.53:137,0,6	0/0:21,0:20:51.12:0,51,953	0/0:2,0:2:6.02:0,6,125	0/0:28,0:25:38.81:0,39,491	1/1:17,0:17:39:472,39,0	0/0:21,0:20:27.77:0,28,463	0/0:10,0:9:12.51:0,13,257	0/0:24,0:23:23.57:0,24,383	0/0:12,0:12:21.52:0,22,330	0/0:12,0:11:19.31:0,19,287	0/0:16,0:15:36.04:0,36,600	0/0:6,0:6:6.01:0,6,75	0/0:39,0:34:42.14:0,42,722	./.	1/1:3,0:3:3:25,3,0	1/1:27,0:27:2.82:39,3,0	0/0:8,0:6:3.01:0,3,51	0/1:11,0:11:25.39:229,0,25	0/0:13,0:13:36.12:0,36,647	1/1:3,0:3:3.01:32,3,0
chr10	67756758	.	CTCTCTGTGTGTGTG	C	1266.50	PASS	AB=1.000;AC=13;AF=0.241;AN=54;BaseQRankSum=3.786;DP=442;FS=9.297;HRun=0;HaplotypeScore=138.9289;InbreedingCoeff=0.4698;MQ=63.44;MQ0=20;MQRankSum=-2.429;QD=12.92;ReadPosRankSum=2.576;VQSLOD=2.0918;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:14,0:14:99:122,0,104	0/0:2,0:2:6.01:0,6,226	0/0:33,0:17:47.63:0,48,826	0/0:36,0:25:59.75:0,60,1233	1/1:7,0:7:5.78:92,6,0	0/0:14,0:13:22.32:0,22,905	0/0:27,0:27:52.51:0,53,1380	0/0:20,0:18:46.87:0,47,1178	0/1:18,0:17:13.03:13,0,503	0/0:23,0:22:57.19:0,57,2033	0/0:3,0:3:6.02:0,6,241	0/0:29,0:25:39.12:0,39,763	1/1:10,6:16:39.12:819,39,0	0/0:19,0:17:28.45:0,28,849	0/0:10,0:9:16.30:0,16,730	0/0:24,0:23:24.08:0,24,666	0/0:11,0:11:24.05:0,24,505	0/0:8,0:7:21.05:0,21,545	0/0:13,0:12:36.04:0,36,988	0/0:6,0:6:6.01:0,6,75	0/0:38,0:33:45.15:0,45,1100	./.	1/1:3,0:3:3:25,3,0	1/1:2,24:26:2.81:129,3,0	0/0:8,0:6:3.01:0,3,51	0/1:13,0:13:99:188,0,514	0/0:14,0:14:42.01:0,42,1494	1/1:1,0:1:3.01:32,3,0
chr10	67756762	.	C	CTGTGTGTG	1568.97	PASS	AB=1.000;AC=38;AF=0.905;AN=42;BaseQRankSum=-3.364;DP=458;FS=0.000;HRun=0;HaplotypeScore=115.7860;InbreedingCoeff=0.2238;MQ=58.66;MQ0=30;MQRankSum=0.535;QD=4.60;ReadPosRankSum=-1.742;VQSLOD=1.8254;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:13:2.99:23,3,0	1/1:2,0:1:3.01:88,3,0	./.	./.	0/1:10,0:10:0.03:0,0,0	1/1:16,0:15:9.03:258,9,0	1/1:29,0:27:4.48:81,4,0	1/1:19,0:17:3.47:28,3,0	1/1:18,0:17:6.27:81,6,0	1/1:21,0:19:6.48:49,6,0	1/1:3,0:3:2.99:24,3,0	1/1:20,9:30:3.01:84,3,0	0/0:17,0:17:8.99:0,9,132	1/1:12,5:17:3.01:101,3,0	1/1:8,3:10:12.02:183,12,0	1/1:15,0:21:3.01:103,3,0	1/1:10,0:10:1.25:3,1,0	1/1:9,0:8:1.25:3,1,0	./.	1/1:8,0:7:1.82:5,2,0	1/1:38,0:32:6.02:98,6,0	./.	./.	0/1:27,0:27:11.99:12,0,49	./.	1/1:18,0:18:15.61:73,16,0	1/1:12,0:14:18.06:373,18,0	./.
chr10	67757995	.	AC	A	4944.34	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=15.987;DP=786;FS=1.557;HRun=1;HaplotypeScore=99.0652;InbreedingCoeff=0.9959;MQ=77.28;MQ0=0;MQRankSum=-1.648;QD=37.18;ReadPosRankSum=2.352;VQSLOD=5.1712;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,150,2363	0/0:13,0:13:39.13:0,39,617	0/0:11,0:11:16.27:0,16,371	0/0:23,0:23:66.22:0,66,1017	0/0:37,0:37:99:0,105,1630	0/0:28,0:28:84.29:0,84,1340	0/0:31,0:31:93.28:0,93,1437	0/0:27,0:27:75.24:0,75,1158	0/0:30,0:30:87.30:0,87,1387	0/0:40,0:40:99:0,120,1917	0/0:18,0:18:51.17:0,51,815	0/0:41,0:41:99:0,123,1941	1/1:0,28:28:78.25:1013,78,0	0/0:30,0:30:90.29:0,90,1408	0/0:22,0:22:63.18:0,63,960	0/0:29,0:29:87.30:0,87,1391	0/0:31,0:31:93.32:0,93,1487	0/0:30,0:30:90.31:0,90,1430	0/0:25,0:25:72.20:0,72,1096	0/0:23,0:23:66.20:0,66,1002	0/0:71,0:71:99:0,214,3405	1/1:0,26:26:75.24:972,75,0	1/1:0,16:16:45.15:584,45,0	1/1:0,27:27:78.25:1013,78,0	0/0:27,0:27:78.24:0,78,1222	1/1:0,30:30:87.28:1130,87,0	0/0:16,0:15:48.16:0,48,764	1/1:0,6:6:18.06:234,18,0
chr10	67760844	.	AT	A	10428.17	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=5.094;DP=595;FS=21.706;HRun=10;HaplotypeScore=62.6049;InbreedingCoeff=0.9328;MQ=76.54;MQ0=0;MQRankSum=-3.175;QD=20.29;ReadPosRankSum=3.947;VQSLOD=3.8113;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:60.12:0,60,637	1/1:3,10:13:29.99:260,30,0	0/0:11,0:10:20.81:0,21,195	0/0:16,0:16:16.01:0,16,281	0/0:29,1:30:40.10:0,40,659	1/1:2,20:22:25.09:459,25,0	1/1:3,14:17:8.81:305,9,0	1/1:7,28:35:80.91:691,81,0	1/1:3,14:17:6.25:280,6,0	1/1:6,18:24:50.96:442,51,0	1/1:5,18:23:47.93:417,48,0	1/1:3,10:13:29.98:260,30,0	1/1:1,16:17:35.99:312,36,0	1/1:3,17:20:44.97:391,45,0	1/1:3,10:13:29.99:260,30,0	1/1:1,25:26:74.99:651,75,0	1/1:2,26:28:77.98:677,78,0	1/1:6,16:22:31.07:374,31,0	1/1:3,12:15:8.81:304,9,0	1/1:6,25:31:67.19:596,67,0	1/1:5,21:26:59.97:521,60,0	1/1:3,19:22:41.95:365,42,0	1/1:2,16:19:53.03:448,53,0	1/1:3,33:36:92.96:807,93,0	1/1:3,19:22:17.81:384,18,0	1/1:4,14:18:41.98:365,42,0	1/1:0,21:21:59.99:521,60,0	1/1:0,14:14:38.99:338,39,0
chr10	67762465	.	C	CG	946.11	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-7.300;DP=678;FS=1.523;HRun=4;HaplotypeScore=84.2242;InbreedingCoeff=0.9824;MQ=90.71;MQ0=0;MQRankSum=-1.364;QD=32.62;ReadPosRankSum=-0.363;VQSLOD=3.8636;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,117,1284	0/0:15,0:15:42:0,42,449	0/0:29,0:29:75.15:0,75,802	0/0:26,0:26:66.07:0,66,685	0/0:25,0:25:67.78:0,68,695	0/0:30,0:30:90.24:0,90,1007	0/0:32,0:32:81.18:0,81,884	0/0:24,0:24:59.87:0,60,617	0/0:22,0:22:54.09:0,54,598	0/0:30,0:30:80.21:0,80,904	0/0:12,0:12:32.11:0,32,335	0/0:29,0:29:81.22:0,81,908	0/0:33,0:33:90.21:0,90,991	0/0:21,0:21:60.16:0,60,670	0/0:20,0:20:51.11:0,51,557	0/0:31,0:31:84.18:0,84,920	0/0:35,0:35:99:0,102,1135	0/0:28,0:28:84.09:0,84,907	0/0:10,0:10:24.07:0,24,272	0/0:11,0:11:30.08:0,30,339	0/0:42,0:42:99:0,108,1202	0/0:14,0:14:35.81:0,36,367	0/0:18,0:18:51.08:0,51,550	0/0:32,0:32:78:0,78,827	0/0:17,0:17:48.14:0,48,543	1/1:3,22:25:69.18:899,69,0	0/0:21,0:21:63.18:0,63,711	1/1:0,4:4:12.04:164,12,0
chr10	67762776	.	T	TA	3850.38	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=12.098;DP=763;FS=6.044;HRun=7;HaplotypeScore=81.0635;InbreedingCoeff=0.9930;MQ=82.87;MQ0=0;MQRankSum=-3.129;QD=29.17;ReadPosRankSum=3.202;VQSLOD=4.2199;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,105,1014	0/0:14,0:14:36.06:0,36,348	0/0:27,0:27:75.06:0,75,705	0/0:20,0:20:39.04:0,39,370	0/0:33,0:33:84.13:0,84,811	0/0:21,0:21:60.08:0,60,569	0/0:16,0:16:48.08:0,48,464	0/0:44,0:44:99:0,105,1002	0/0:25,0:25:63.09:0,63,608	0/0:29,0:29:78.12:0,78,753	0/0:9,0:9:26.97:0,27,246	0/0:33,0:33:84.12:0,84,806	1/1:2,21:23:34.22:696,34,0	0/0:29,0:29:81.12:0,81,782	0/0:41,0:41:99:0,114,1078	0/0:40,0:40:99:0,114,1093	0/0:36,0:36:90.13:0,90,869	0/0:21,0:21:51.07:0,51,488	0/0:18,0:18:54.09:0,54,521	0/0:28,0:28:81.12:0,81,777	0/0:38,0:38:99:0,99,956	1/1:6,20:26:60.12:704,60,0	1/1:3,30:33:77.94:942,78,0	1/1:1,11:12:24.07:290,24,0	0/0:27,0:27:78.10:0,78,746	1/1:4,30:34:90.26:1074,90,0	0/0:43,0:42:99:0,111,1065	1/1:0,4:4:12.04:145,12,0
chr10	67764707	.	GGGAGCAAAGGCATCCACCACCACCACCCGCGTC	G	202.10	PASS	AB=0.766;AC=1;AF=0.018;AN=56;BaseQRankSum=3.880;DP=585;FS=8.529;HRun=0;HaplotypeScore=463.4197;InbreedingCoeff=-0.0187;MQ=65.44;MQ0=0;MQRankSum=1.764;QD=5.61;ReadPosRankSum=-3.854;VQSLOD=0.2637;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:96.30:0,96,9983	0/0:6,0:6:18.05:0,18,2070	0/0:16,0:12:28.44:0,28,1442	0/0:16,0:16:36.02:0,36,1927	0/0:10,0:10:27.08:0,27,2080	0/0:14,0:14:36.12:0,36,3391	0/0:20,0:20:60.14:0,60,4779	0/0:15,0:15:45.15:0,45,3257	0/0:13,0:13:36.12:0,36,3547	0/0:23,0:23:69.24:0,69,7831	0/0:9,0:9:21.07:0,21,1963	0/0:35,0:35:99:0,105,8049	0/0:15,0:15:42.14:0,42,3978	0/0:14,0:14:39.13:0,39,3337	0/0:24,0:24:72.25:0,72,7341	0/0:23,0:23:66.23:0,66,6282	0/0:48,0:48:99:0,141,16269	0/0:31,0:31:90.28:0,90,10309	0/0:16,0:16:45.15:0,45,4169	0/0:19,0:19:55.28:0,55,5241	0/0:43,0:43:99:0,111,10680	0/0:18,0:18:49.88:0,50,4381	0/0:12,0:12:36.12:0,36,3247	0/0:32,0:32:70.51:0,71,6112	0/0:14,0:14:42.14:0,42,4250	0/1:25,11:36:99:277,0,8139	0/0:15,0:15:41.51:0,42,3221	0/0:14,0:14:39.13:0,39,4594
chr10	67764740	.	C	CTGTGTGTGTGTG	6307.54	PASS	AB=0.680;AC=37;AF=0.661;AN=56;BaseQRankSum=3.849;DP=729;FS=1.179;HRun=0;HaplotypeScore=230.9763;InbreedingCoeff=0.6742;MQ=53.43;MQ0=4;MQRankSum=-5.946;QD=13.03;ReadPosRankSum=-1.670;VQSLOD=3.1857;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:46:72.24:0,72,2080	0/0:7,0:8:14.92:0,15,251	0/0:28,0:12:3.01:0,3,64	0/0:26,0:10:2.47:0,2,84	0/0:8,0:9:15.05:0,15,392	1/1:9,0:19:6:182,6,0	1/1:24,0:44:5.84:218,6,0	0/0:31,0:34:42.09:0,42,880	1/1:6,0:24:3.01:157,3,0	1/1:22,0:21:27.08:798,27,0	1/1:12,0:13:2.14:23,2,0	1/1:21,0:41:21.04:773,21,0	1/1:10,1:21:7.27:295,7,0	1/1:7,0:24:5.93:193,6,0	1/1:14,0:27:17.75:579,18,0	1/1:13,0:27:8.77:309,9,0	0/0:43,0:48:99:0,102,3261	0/0:24,0:28:6.65:0,7,1793	1/1:13,0:22:33.05:846,33,0	0/1:9,0:17:0:0,0,0	1/1:48,0:48:20.62:280,21,0	1/1:20,0:20:6.63:91,7,0	0/0:17,0:17:0.47:0,0,2	1/1:16,4:30:5.23:282,5,0	1/1:9,0:24:5.70:193,6,0	1/1:30,0:30:32.96:619,33,0	1/1:9,1:19:9.92:355,10,0	1/1:9,0:11:6.02:114,6,0
chr10	67765612	.	A	ATGCCCTCCTCTGG	7651.10	PASS	AB=0.569;AC=11;AF=0.196;AN=56;BaseQRankSum=-4.094;DP=645;FS=35.764;HRun=0;HaplotypeScore=228.3799;InbreedingCoeff=0.8183;MQ=75.92;MQ0=1;MQRankSum=-11.108;QD=75.75;ReadPosRankSum=-1.280;VQSLOD=3.0636;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:60,0:60:99:0,162,5912	0/0:5,0:5:15.05:0,15,590	0/0:20,0:19:54.14:0,54,1438	0/0:24,0:23:57.12:0,57,1701	0/0:36,0:36:99:0,102,3806	0/0:23,0:23:66.19:0,66,2378	0/0:31,0:31:84.20:0,84,2980	0/0:30,0:30:84.25:0,84,2685	0/0:21,0:21:57.20:0,57,2135	0/0:25,0:25:66.20:0,66,2235	0/0:16,0:16:45.08:0,45,1309	0/0:29,0:29:84.29:0,84,3211	1/1:7,10:21:45.15:2447,45,0	0/0:29,0:29:81.26:0,81,3102	0/0:25,0:25:75.23:0,75,2709	0/0:26,0:26:69.24:0,69,2619	0/0:29,0:29:84.27:0,84,3131	0/0:17,0:17:51.18:0,51,1918	0/0:18,0:18:48.16:0,48,1729	0/0:20,0:20:57.17:0,57,2023	0/0:25,0:25:69.24:0,69,2707	1/1:3,7:10:18.06:824,18,0	1/1:6,6:17:8.92:340,9,0	1/1:9,5:20:12.04:604,12,0	0/0:20,0:20:57.18:0,57,2027	0/1:7,12:29:39.11:3239,0,39	0/0:15,0:14:45.14:0,45,1498	1/1:2,2:3:3.01:196,3,0
chr10	67767127	.	ATT	A	1213.89	PASS	AB=1.000;AC=9;AF=0.167;AN=54;BaseQRankSum=2.272;DP=420;FS=2.181;HRun=2;HaplotypeScore=76.8043;InbreedingCoeff=0.4715;MQ=58.52;MQ0=7;MQRankSum=-2.628;QD=13.05;ReadPosRankSum=0.607;VQSLOD=0.8351;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:23:54.11:0,54,818	0/0:12,0:12:23:0,23,288	0/0:22,0:14:30.14:0,30,692	0/0:18,0:13:38.95:0,39,629	0/0:14,0:14:11.28:0,11,451	0/0:17,0:17:45.94:0,46,630	0/0:15,0:15:32.45:0,32,532	0/0:19,0:19:45.81:0,46,679	0/0:7,0:7:21.04:0,21,299	0/0:10,0:10:24.08:0,24,393	0/0:11,0:11:33.10:0,33,515	0/0:12,0:11:18.45:0,18,425	0/1:8,0:8:10.31:185,0,10	0/0:12,0:12:4.53:0,5,210	0/0:10,0:10:29.92:0,30,387	0/0:21,0:19:46.83:0,47,658	0/1:31,0:30:10.62:11,0,201	0/0:22,0:22:22.92:0,23,278	0/0:8,0:8:21.91:0,22,303	0/0:10,0:10:30.08:0,30,470	0/0:33,0:31:78.32:0,78,1170	./.	1/1:0,9:9:0.38:40,0,0	1/1:20,3:23:27.62:489,28,0	0/0:11,0:11:27.06:0,27,414	0/1:17,0:15:15.82:537,0,16	0/0:14,0:13:32.76:0,33,527	1/1:4,1:3:6.02:91,6,0
chr10	67767129	.	TCACACA	T	1457.60	PASS	AB=0.953;AC=24;AF=0.500;AN=48;BaseQRankSum=1.516;DP=427;FS=18.500;HRun=0;HaplotypeScore=101.0535;InbreedingCoeff=0.4324;MQ=56.23;MQ0=8;MQRankSum=-4.194;QD=7.84;ReadPosRankSum=0.367;VQSLOD=0.9938;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:24:11.93:0,12,118	0/0:12,0:12:11.30:0,11,249	./.	./.	0/0:14,0:15:20.15:0,20,364	1/1:17,0:17:6.45:75,6,0	1/1:16,0:16:3.01:52,3,0	0/0:23,0:22:3.45:0,3,23	1/1:6,0:7:3.01:42,3,0	0/1:11,0:11:0.01:0,0,0	0/0:9,0:9:3:0,3,25	0/1:12,1:12:17.17:109,0,17	1/1:5,0:8:12.03:139,12,0	1/1:9,3:12:21.02:350,21,0	1/1:6,3:10:12.04:223,12,0	1/1:14,4:18:24.02:375,24,0	0/0:33,0:32:16.25:0,16,230	0/0:24,0:24:14.33:0,14,255	./.	0/1:11,1:12:22.20:54,0,22	./.	0/1:5,0:5:0:0,0,0	0/1:9,0:9:0.01:0,0,0	1/1:23,0:23:0.47:1,0,0	1/1:9,1:10:3.01:60,3,0	0/0:20,0:18:38.19:0,38,546	0/1:11,2:12:22.64:128,0,23	0/0:6,0:4:1.25:0,1,3
chr10	67767131	.	A	ACATT	918.52	PASS	AB=0.887;AC=9;AF=0.167;AN=54;BaseQRankSum=1.667;DP=444;FS=0.000;HRun=0;HaplotypeScore=107.4720;InbreedingCoeff=0.0423;MQ=53.40;MQ0=10;MQRankSum=0.741;QD=5.31;ReadPosRankSum=-4.472;VQSLOD=0.3734;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:25:6.73:7,0,541	0/1:16,0:16:38.92:199,0,39	0/0:17,0:9:27.04:0,27,378	0/0:15,0:10:27.09:0,27,431	0/1:16,0:15:34.06:34,0,397	0/0:17,0:17:41.76:0,42,576	0/0:16,0:16:24.65:0,25,416	1/1:22,0:20:27.22:462,27,0	0/0:6,0:6:18.06:0,18,242	0/0:12,0:12:20.57:0,21,292	0/0:9,0:9:27.09:0,27,403	0/0:13,0:12:32.94:0,33,453	0/1:8,0:8:40.37:40,0,187	0/0:12,0:12:16.37:0,16,346	0/0:11,0:11:25.80:0,26,344	0/1:20,0:18:13.70:14,0,549	0/1:14,22:36:99:119,0,104	0/1:9,18:28:43.19:185,0,43	0/0:10,0:9:15.04:0,15,216	0/0:12,0:12:24.01:0,24,384	0/0:32,0:30:53.44:0,53,815	./.	0/0:10,0:10:1.89:0,2,40	0/0:21,0:22:27.42:0,27,403	0/0:10,0:10:15.05:0,15,221	0/0:22,0:20:38.66:0,39,499	0/0:13,0:12:33.11:0,33,467	0/0:7,0:5:6.49:0,6,91
chr10	67767133	.	A	ATT	654.86	PASS	AB=0.891;AC=7;AF=0.130;AN=54;BaseQRankSum=1.505;DP=436;FS=0.000;HRun=0;HaplotypeScore=90.2763;InbreedingCoeff=-0.1520;MQ=52.92;MQ0=11;MQRankSum=1.652;QD=4.61;ReadPosRankSum=-3.689;VQSLOD=1.5231;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:26:44.87:0,45,623	0/1:8,8:16:99:178,0,123	0/0:16,0:9:27.07:0,27,391	0/0:14,0:9:27.09:0,27,432	0/1:16,1:16:9.99:10,0,448	0/0:17,0:17:41.24:0,41,562	0/1:17,0:17:3.26:3,0,389	0/1:10,10:19:46.89:417,0,47	0/0:6,0:6:18.03:0,18,227	0/0:11,0:11:28.49:0,28,331	0/0:9,0:9:27.09:0,27,404	0/0:12,0:11:32.97:0,33,429	0/1:8,0:8:55.33:55,0,175	0/0:12,0:12:29.93:0,30,320	0/0:11,0:11:26.59:0,27,311	0/0:19,0:17:22.14:0,22,519	0/1:34,0:33:12.97:13,0,251	0/1:28,1:29:99:99,0,132	0/0:11,0:10:23.53:0,24,267	0/0:12,0:12:10.80:0,11,346	0/0:31,0:29:56.03:0,56,828	./.	0/0:9,0:9:2.22:0,2,43	0/0:21,0:21:25.52:0,26,402	0/0:9,0:9:14.43:0,14,221	0/0:22,0:20:52.53:0,53,646	0/0:12,0:11:33.07:0,33,444	0/0:8,0:5:11.93:0,12,148
chr10	67767196	.	A	ATT	2877.07	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=1.441;DP=485;FS=0.996;HRun=3;HaplotypeScore=101.5482;InbreedingCoeff=0.9548;MQ=69.66;MQ0=2;MQRankSum=-1.563;QD=32.69;ReadPosRankSum=2.233;VQSLOD=3.3934;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:60.19:0,60,800	0/0:12,0:12:33.08:0,33,424	0/0:20,0:13:19.59:0,20,234	0/0:28,0:18:17.84:0,18,217	0/0:27,0:27:69.14:0,69,865	0/0:11,0:11:24.04:0,24,254	0/0:14,0:14:39.05:0,39,404	0/0:31,0:31:75.23:0,75,1018	0/0:12,0:12:30.04:0,30,309	0/0:18,0:18:54.13:0,54,592	0/0:13,0:13:35.79:0,36,343	0/0:14,0:14:27.05:0,27,295	1/1:4,11:16:35.97:518,36,0	0/0:10,0:10:20.94:0,21,211	0/0:16,0:16:29.18:0,29,343	0/0:15,0:15:39.08:0,39,444	0/0:24,0:24:63.13:0,63,837	0/0:22,0:22:57.19:0,57,788	0/0:24,0:23:65.53:0,66,665	0/0:15,0:15:39.09:0,39,451	0/0:15,0:15:26.78:0,27,257	1/1:1,8:9:17.94:329,18,0	1/1:2,12:14:33.11:602,33,0	1/1:3,17:22:57.19:991,57,0	0/0:17,0:17:42.01:0,42,437	1/1:14,0:14:2.61:291,3,0	0/0:19,0:19:51.09:0,51,531	1/1:13,0:13:30.02:327,30,0
chr10	67767199	.	T	TA	4147.16	PASS	AB=0.858;AC=34;AF=0.607;AN=56;BaseQRankSum=-4.793;DP=502;FS=0.000;HRun=12;HaplotypeScore=89.2090;InbreedingCoeff=0.5808;MQ=73.31;MQ0=3;MQRankSum=-0.247;QD=11.85;ReadPosRankSum=-0.966;VQSLOD=3.1838;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:22:44.68:0,45,329	0/0:11,0:11:26.80:0,27,195	0/0:24,0:17:9.29:0,9,67	0/1:24,0:16:37.13:37,0,37	0/1:26,1:28:5.32:5,0,239	1/1:2,7:9:18.03:175,18,0	1/1:6,9:15:9.66:242,10,0	0/0:25,0:26:46.74:0,47,334	1/1:4,12:16:26.99:252,27,0	1/1:5,16:21:27.48:419,27,0	1/1:3,10:13:27.04:263,27,0	0/1:4,9:13:16.93:153,0,17	0/1:17,0:17:2.64:3,0,51	1/1:2,10:12:15.02:144,15,0	1/1:2,14:17:7.98:226,8,0	0/1:7,9:16:0.87:154,0,1	0/0:24,1:25:33.36:0,33,393	0/0:22,0:22:44.60:0,45,328	1/1:7,17:23:35.37:476,35,0	1/1:8,11:19:10.02:210,10,0	1/1:3,10:14:23.87:219,24,0	0/0:9,0:9:7.77:0,8,32	0/0:13,0:13:14.88:0,15,82	0/1:20,0:21:27.17:27,0,55	1/1:5,10:15:33.50:313,33,0	1/1:0,2:19:46.93:302,47,0	1/1:7,14:21:24.10:361,24,0	1/1:0,0:13:28.26:165,28,0
chr10	67768120	.	GTTGT	G	3873.71	PASS	AB=0.596;AC=11;AF=0.196;AN=56;BaseQRankSum=10.530;DP=639;FS=9.632;HRun=0;HaplotypeScore=108.8600;InbreedingCoeff=0.9055;MQ=63.00;MQ0=5;MQRankSum=1.823;QD=29.57;ReadPosRankSum=1.669;VQSLOD=3.2684;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:60.18:0,60,1411	0/0:14,0:14:39.13:0,39,927	0/0:32,0:23:49.36:0,49,925	0/0:24,0:21:40.94:0,41,723	0/0:31,0:31:87.30:0,87,2100	0/0:11,0:11:30.10:0,30,751	0/0:18,0:18:48.16:0,48,1130	0/0:30,0:29:51.17:0,51,1176	0/0:19,0:19:51.16:0,51,1163	0/0:32,0:32:75.24:0,75,1616	0/0:23,0:23:42.14:0,42,1019	0/0:22,0:22:51.17:0,51,1210	1/1:1,20:21:51.17:869,51,0	0/0:21,0:21:57.17:0,57,1295	0/0:16,0:16:33.11:0,33,786	0/0:24,0:24:54.17:0,54,1169	0/0:21,0:21:54.18:0,54,1217	0/0:27,0:27:32.25:0,32,1233	0/0:27,0:27:57.19:0,57,1217	0/0:23,0:23:45.15:0,45,1065	0/0:25,0:25:51.16:0,51,1163	1/1:9,13:22:36.12:551,36,0	1/1:4,14:18:26.66:458,27,0	1/1:4,14:18:33.11:563,33,0	0/0:13,0:13:27.09:0,27,601	0/1:9,19:27:7.11:871,0,7	0/0:27,0:27:69.24:0,69,1667	1/1:10,14:24:33.11:562,33,0
chr10	67768387	.	ACC	A	391.35	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.778;DP=534;FS=7.131;HRun=4;HaplotypeScore=63.6196;InbreedingCoeff=0.9324;MQ=82.93;MQ0=0;MQRankSum=-1.146;QD=26.09;ReadPosRankSum=-0.129;VQSLOD=1.5288;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,108,2002	0/0:3,0:3:9.03:0,9,169	0/0:16,0:17:16.67:0,17,629	0/0:18,0:18:45.13:0,45,736	0/0:18,0:18:54.18:0,54,982	0/0:25,0:25:75.25:0,75,1366	0/0:14,0:14:42.14:0,42,758	0/0:39,0:39:99:0,108,2007	1/1:0,15:15:33.11:486,33,0	0/0:20,0:20:57.20:0,57,1065	0/0:15,0:15:45.15:0,45,840	0/0:19,0:19:57.18:0,57,1000	0/0:22,0:22:66.23:0,66,1218	0/0:9,0:9:27.09:0,27,505	0/0:17,0:17:45.15:0,45,839	0/0:22,0:22:60.21:0,60,1105	0/0:23,0:23:69.24:0,69,1263	0/0:15,0:15:45.15:0,45,827	0/0:14,0:14:42.14:0,42,776	0/0:15,0:15:45.15:0,45,834	0/0:21,0:21:60.21:0,60,1108	0/0:13,0:13:36.12:0,36,668	0/0:18,0:18:54.19:0,54,1005	0/0:8,0:8:24.07:0,24,418	0/0:22,0:22:66.23:0,66,1216	0/0:26,0:25:75.24:0,75,1345	0/0:22,0:22:66.22:0,66,1158	0/0:25,0:25:63.22:0,63,1180
chr10	67768477	.	A	ATATTTATTTATTTATT	1327.35	PASS	AC=10;AF=0.185;AN=54;BaseQRankSum=0.329;DP=338;FS=1.031;HRun=0;HaplotypeScore=137.1518;InbreedingCoeff=0.6944;MQ=66.47;MQ0=3;MQRankSum=-4.302;QD=39.04;ReadPosRankSum=0.017;VQSLOD=2.8441;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:33.09:0,33,1222	0/0:7,0:7:9.02:0,9,223	0/0:11,0:9:3:0,3,27	0/0:7,0:5:3.01:0,3,52	0/0:16,0:16:20.89:0,21,558	0/0:25,0:25:66.23:0,66,2445	0/0:8,0:8:9.03:0,9,306	0/0:40,0:38:69.20:0,69,1950	0/0:10,0:10:21.07:0,21,753	0/0:16,0:16:27.09:0,27,921	0/0:9,0:9:15.05:0,15,667	0/0:12,0:12:24.08:0,24,1047	1/1:2,2:5:2.55:176,3,0	0/0:4,0:4:3.01:0,3,133	0/0:10,0:10:15.04:0,15,558	0/0:7,0:7:12.04:0,12,399	0/0:21,0:21:51.18:0,51,2054	0/0:20,0:20:57.20:0,57,2224	0/0:17,0:16:21.07:0,21,857	0/0:6,0:6:9.03:0,9,226	0/0:8,0:8:24.07:0,24,784	1/1:3,1:4:3.01:178,3,0	./.	1/1:2,1:3:3.01:155,3,0	0/0:14,0:14:30.10:0,30,1086	1/1:4,3:9:15.05:653,15,0	0/0:13,0:13:18.06:0,18,704	1/1:13,0:10:18.06:309,18,0
chr10	67768857	.	T	TA	553.81	PASS	AB=0.914;AC=7;AF=0.125;AN=56;BaseQRankSum=-0.758;DP=506;FS=10.316;HRun=14;HaplotypeScore=89.1324;InbreedingCoeff=0.4498;MQ=61.26;MQ0=1;MQRankSum=-0.338;QD=6.44;ReadPosRankSum=-1.601;VQSLOD=1.4802;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:21.18:0,21,197	0/0:8,0:8:20.67:0,21,135	0/0:14,0:9:8.45:0,8,70	0/0:18,0:11:2.82:0,3,19	0/0:26,0:29:45.07:0,45,272	0/0:22,1:26:45.29:0,45,281	0/0:12,0:13:21.64:0,22,127	0/0:30,1:31:55.95:0,56,360	0/0:16,0:17:46.29:0,46,292	0/0:15,0:14:26.44:0,26,171	0/1:10,2:13:24.09:24,0,111	0/0:25,0:26:42.43:0,42,261	0/0:13,0:14:11.71:0,12,77	0/0:14,0:15:30.36:0,30,182	0/0:25,0:25:44.19:0,44,287	0/0:20,0:19:41.26:0,41,267	0/0:22,0:22:43.32:0,43,273	0/0:17,0:17:32.45:0,32,210	0/0:22,0:21:24.49:0,24,144	0/0:11,0:12:22.64:0,23,139	0/1:12,0:12:13.06:13,0,30	0/1:12,2:14:8.77:9,0,77	0/0:13,0:14:37.25:0,37,227	0/0:10,0:10:17.69:0,18,115	0/0:11,0:11:17.61:0,18,114	1/1:9,14:23:33.45:288,33,0	0/0:15,2:17:5.90:0,6,157	1/1:6,18:21:34.70:359,35,0
chr10	67769105	.	AAT	A	1538.11	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=3.733;DP=497;FS=7.908;HRun=0;HaplotypeScore=108.8253;InbreedingCoeff=0.9081;MQ=75.27;MQ0=5;MQRankSum=-5.392;QD=11.83;ReadPosRankSum=0.664;VQSLOD=2.9923;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:42.81:0,43,340	1/1:1,5:6:2.92:41,3,0	0/0:31,0:21:51.15:0,51,859	0/0:36,0:23:53.82:0,54,910	0/0:14,0:13:5.99:0,6,48	0/0:13,0:13:26.92:0,27,216	0/0:17,0:17:36.35:0,36,334	1/1:25,0:25:65.94:570,66,0	0/0:14,0:14:35.93:0,36,317	0/0:18,0:18:50.92:0,51,529	0/0:19,0:19:26.99:0,27,269	0/0:22,0:22:59.96:0,60,586	1/1:8,0:8:5.91:38,6,0	0/0:17,0:17:43.74:0,44,344	0/0:19,0:19:50.97:0,51,468	0/0:17,0:17:44.99:0,45,426	1/1:21,4:25:54.38:437,54,0	1/1:13,5:18:50.86:442,51,0	0/0:15,0:15:41.99:0,42,389	0/0:13,0:13:33.02:0,33,364	0/0:19,0:19:53.62:0,54,479	1/1:18,0:18:14.74:93,15,0	1/1:15,0:15:8.73:54,9,0	1/1:15,0:15:8.84:55,9,0	0/0:14,0:14:37.24:0,37,297	0/0:16,0:16:44.62:0,45,419	0/0:14,0:14:20.23:0,20,197	0/0:14,0:14:26.93:0,27,298
chr10	67769106	.	ATATGTGTATG	A	2781.79	PASS	AB=1.000;AC=14;AF=0.250;AN=56;BaseQRankSum=-3.252;DP=493;FS=11.061;HRun=0;HaplotypeScore=166.9614;InbreedingCoeff=0.5058;MQ=73.63;MQ0=6;MQRankSum=-2.538;QD=17.28;ReadPosRankSum=2.381;VQSLOD=2.2632;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:24:99:125,0,114	0/0:6,0:6:2.49:0,2,62	0/0:30,0:20:51.16:0,51,919	0/0:35,0:22:59.54:0,60,948	0/0:14,0:13:5.99:0,6,48	0/0:13,0:13:15.93:0,16,201	0/0:17,0:17:15.31:0,15,418	1/1:25,0:25:35.43:902,35,0	0/0:13,0:13:17.94:0,18,388	0/0:18,0:18:25.08:0,25,603	0/0:19,0:19:16.07:0,16,494	0/0:22,0:22:41.12:0,41,1071	1/1:0,7:8:6.02:184,6,0	0/0:17,0:17:10.31:0,10,303	0/0:20,0:20:26.17:0,26,674	0/0:17,0:17:25.48:0,25,653	0/1:25,0:25:68.64:359,0,69	0/1:18,0:18:25.12:377,0,25	0/0:14,0:14:12.60:0,13,296	0/0:12,0:12:23.23:0,23,586	0/0:20,0:19:28.36:0,28,819	1/1:2,15:18:15.05:482,15,0	1/1:1,12:14:8.71:217,9,0	1/1:1,14:15:9.03:301,9,0	0/0:14,0:14:7.13:0,7,228	0/0:17,0:17:35.14:0,35,919	0/1:14,0:14:6.59:7,0,423	0/0:14,0:14:15.02:0,15,694
chr10	67769108	.	A	ATG	720.13	PASS	AB=0.983;AC=25;AF=0.463;AN=54;BaseQRankSum=-2.007;DP=498;FS=2.794;HRun=0;HaplotypeScore=123.1357;InbreedingCoeff=0.2258;MQ=71.19;MQ0=8;MQRankSum=0.654;QD=2.46;ReadPosRankSum=-3.148;VQSLOD=1.8437;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:21,0:23:8.72:14,0,9	0/0:7,0:7:2.77:0,3,13	0/0:28,0:18:45.15:0,45,603	0/0:35,0:22:47.65:0,48,622	./.	0/1:16,0:16:14.69:23,0,15	1/1:16,0:16:5.44:53,5,0	1/1:27,0:26:10.59:117,11,0	0/0:14,0:14:1.89:0,2,17	0/1:17,0:17:15.79:37,0,16	1/1:8,11:19:5.49:87,5,0	1/1:23,0:23:6.33:64,6,0	0/0:8,0:8:5.68:0,6,28	1/1:17,0:17:0.17:20,0,0	0/1:20,1:21:15.62:61,0,16	1/1:18,0:18:2.28:48,2,0	0/0:25,0:25:10.13:0,10,42	0/0:17,0:17:14.78:0,15,65	0/1:16,0:16:5.11:5,0,14	0/1:11,1:12:23.69:36,0,24	1/1:23,1:23:8.42:103,8,0	0/0:16,0:16:9.37:0,9,37	0/0:13,0:13:5.39:0,5,23	0/0:15,0:15:6.93:0,7,31	0/0:14,0:14:2.44:0,2,7	0/1:15,0:15:12.10:12,0,28	1/1:14,0:14:2.98:29,3,0	1/1:5,10:15:12.51:177,13,0
chr10	67769112	.	GTA	G	6043.53	PASS	AB=1.000;AC=47;AF=0.870;AN=54;BaseQRankSum=-3.677;DP=502;FS=4.565;HRun=0;HaplotypeScore=96.0356;InbreedingCoeff=0.4233;MQ=66.33;MQ0=8;MQRankSum=-3.194;QD=13.96;ReadPosRankSum=1.989;VQSLOD=4.7233;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:21:6.96:269,7,0	1/1:8,0:8:2.99:42,3,0	0/0:25,0:15:44.96:0,45,426	0/0:33,0:20:42.80:0,43,427	./.	1/1:13,0:13:0.56:104,1,0	1/1:17,0:17:18.03:167,18,0	1/1:26,0:25:64.30:512,64,0	1/1:12,0:12:17.49:206,17,0	1/1:17,0:17:31.65:320,32,0	1/1:19,0:19:17.33:147,17,0	0/1:24,0:24:20.07:299,0,20	1/1:8,0:8:5.75:30,6,0	1/1:18,0:18:47.81:376,48,0	1/1:22,0:22:46.47:365,46,0	1/1:17,0:17:26.78:261,27,0	1/1:24,4:28:62.45:507,62,0	1/1:16,3:19:54.33:468,54,0	1/1:15,0:15:14.68:281,15,0	0/1:11,0:11:4.04:135,0,4	1/1:26,0:25:22.64:330,23,0	1/1:16,0:16:14.46:78,14,0	1/1:13,0:13:8.57:47,9,0	1/1:16,0:15:8.63:46,9,0	1/1:17,0:17:47.97:431,48,0	1/1:19,0:19:24.85:324,25,0	1/1:16,0:16:15.75:226,16,0	0/1:15,0:15:1.70:73,0,2
chr10	67769208	.	G	GTTTTTT	3527.90	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=11.911;DP=503;FS=3.358;HRun=6;HaplotypeScore=120.7281;InbreedingCoeff=0.8626;MQ=75.99;MQ0=3;MQRankSum=-7.229;QD=33.28;ReadPosRankSum=-3.122;VQSLOD=-0.4609;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:74.55:0,75,1375	0/0:8,0:8:20.85:0,21,325	0/1:21,0:20:28.99:29,0,205	0/0:20,0:19:8.77:0,9,334	0/0:16,0:16:45.11:0,45,771	0/0:14,0:14:36.05:0,36,616	0/0:33,0:33:96.08:0,96,1400	0/0:28,0:28:69.01:0,69,898	0/0:15,0:15:45.04:0,45,698	0/0:20,0:20:60.08:0,60,923	0/0:19,0:19:45.06:0,45,763	0/0:16,0:16:48:0,48,790	1/1:9,2:12:26.94:455,27,0	0/0:12,0:12:33:0,33,480	0/0:13,0:12:36.07:0,36,640	0/0:16,0:16:45.07:0,45,750	0/0:27,0:27:75.05:0,75,1268	0/0:17,0:17:48.08:0,48,787	0/0:22,0:22:60.04:0,60,879	0/0:19,0:19:54.03:0,54,856	0/0:21,0:20:53.89:0,54,899	1/1:15,3:17:39.05:632,39,0	1/1:9,1:11:32.73:517,33,0	1/1:12,0:11:18.42:187,18,0	0/0:17,0:17:45.09:0,45,778	1/1:16,5:23:5.56:1065,6,0	0/0:16,0:16:45.04:0,45,707	1/1:3,3:8:24.07:642,24,0
chr10	67769214	.	TG	T	574.93	PASS	AB=0.971;AC=9;AF=0.161;AN=56;BaseQRankSum=9.714;DP=513;FS=1.773;HRun=1;HaplotypeScore=78.0718;InbreedingCoeff=0.5989;MQ=70.29;MQ0=4;MQRankSum=-6.543;QD=5.87;ReadPosRankSum=-2.477;VQSLOD=-0.2644;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:84.12:0,84,1057	0/0:7,0:7:21:0,21,262	0/1:21,1:18:7.24:7,0,345	0/0:16,0:14:21.97:0,22,382	0/0:17,0:17:48.12:0,48,619	0/0:14,0:14:42.13:0,42,554	0/0:35,0:35:99:0,105,1351	0/0:28,0:28:81.17:0,81,1021	0/0:17,0:17:51.13:0,51,659	0/0:21,0:21:63.20:0,63,832	0/0:16,0:16:48.16:0,48,646	0/0:16,0:16:48.02:0,48,608	1/1:12,0:12:9.27:90,9,0	0/0:12,0:12:36.11:0,36,473	0/0:13,0:12:39.13:0,39,529	0/0:19,0:19:51.14:0,51,660	0/0:29,0:29:87.11:0,87,1081	0/0:16,0:16:48.14:0,48,636	0/0:23,0:23:63.29:0,63,812	0/0:21,0:21:63.10:0,63,785	0/0:21,0:20:60.17:0,60,780	1/1:19,2:20:16.93:236,17,0	1/1:11,2:13:21.91:199,22,0	0/0:11,0:10:8.39:0,8,31	0/0:17,0:17:38.45:0,38,610	0/1:21,1:22:58.65:158,0,59	0/0:16,0:16:48.14:0,48,633	0/1:8,0:8:9.63:36,0,10
chr10	67769217	.	T	TTG	1481.24	PASS	AB=0.625;AC=5;AF=0.089;AN=56;BaseQRankSum=7.882;DP=528;FS=8.454;HRun=0;HaplotypeScore=90.3607;InbreedingCoeff=-0.0909;MQ=69.84;MQ0=4;MQRankSum=-8.020;QD=18.75;ReadPosRankSum=0.242;VQSLOD=3.0022;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:87.23:0,87,1280	0/0:7,0:7:21.03:0,21,293	0/0:22,0:18:44.91:0,45,603	0/0:18,0:16:34.73:0,35,481	0/0:19,0:19:48.15:0,48,714	0/0:15,0:15:45.13:0,45,647	0/0:34,0:34:99:0,102,1557	0/0:32,0:32:84.27:0,84,1246	0/0:18,0:18:51.17:0,51,777	0/0:22,0:22:63.18:0,63,920	0/0:16,0:16:48.16:0,48,735	0/0:15,0:15:42.14:0,42,642	0/1:5,6:14:82.43:203,0,82	0/0:12,0:12:36.12:0,36,550	0/0:14,0:13:42.13:0,42,622	0/0:21,0:21:54.16:0,54,786	0/0:29,0:29:84.21:0,84,1234	0/0:15,0:15:45.15:0,45,688	0/0:21,0:21:63.16:0,63,911	0/0:21,0:21:63.20:0,63,943	0/0:21,0:20:60.20:0,60,913	0/1:10,8:20:27.92:300,0,28	0/1:6,5:13:15.61:299,0,16	0/0:12,0:11:0.61:0,1,172	0/0:19,0:19:50.43:0,50,780	0/1:12,11:23:99:463,0,109	0/0:16,0:16:48.16:0,48,735	0/1:1,7:8:17.49:334,0,17
chr10	67769223	.	T	TTG	930.08	PASS	AB=0.884;AC=6;AF=0.107;AN=56;BaseQRankSum=9.965;DP=522;FS=8.624;HRun=0;HaplotypeScore=93.7616;InbreedingCoeff=-0.1236;MQ=64.65;MQ0=4;MQRankSum=-8.847;QD=10.94;ReadPosRankSum=0.930;VQSLOD=2.8576;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:93.30:0,93,1397	0/0:5,0:5:15.05:0,15,230	0/0:19,0:14:0.93:0,1,406	0/0:17,0:15:26.08:0,26,438	0/0:21,0:21:63.21:0,63,941	0/0:14,0:14:42.14:0,42,642	0/0:34,0:34:99:0,102,1493	0/0:29,0:29:75.19:0,75,1064	0/0:19,0:19:54.17:0,54,808	0/0:23,0:23:66.19:0,66,983	0/0:17,0:17:51.16:0,51,758	0/0:17,0:17:45.15:0,45,686	0/1:13,0:14:90.01:111,0,90	0/0:12,0:12:33.10:0,33,483	0/0:16,0:15:45.12:0,45,663	0/0:20,0:20:57.18:0,57,849	0/0:29,0:29:81.26:0,81,1215	0/0:14,0:14:42.14:0,42,643	0/0:22,0:22:66.17:0,66,965	0/0:21,0:21:63.19:0,63,922	0/0:21,0:20:60.17:0,60,875	0/1:16,0:17:81.28:150,0,81	0/1:10,0:12:23.71:149,0,24	0/1:9,1:10:35.96:36,0,57	0/0:19,0:19:29.15:0,29,796	0/1:16,7:23:98.80:509,0,99	0/0:16,0:16:48.15:0,48,715	0/1:7,0:7:17.34:99,0,17
chr10	67769513	.	TGAAC	T	9342.09	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-1.057;DP=615;FS=1.919;HRun=0;HaplotypeScore=118.6874;InbreedingCoeff=0.9611;MQ=65.32;MQ0=2;MQRankSum=6.879;QD=23.59;ReadPosRankSum=3.525;VQSLOD=4.7049;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,108,2151	1/1:3,7:10:21.07:327,21,0	0/0:14,0:12:12:0,12,181	0/0:20,0:19:19.31:0,19,314	0/0:21,0:21:48.15:0,48,1035	1/1:3,22:25:39.13:612,39,0	1/1:14,15:29:21.07:335,21,0	1/1:7,12:19:36.01:405,36,0	1/1:2,10:12:27.09:431,27,0	1/1:10,16:26:51.15:775,51,0	1/1:10,6:16:17.98:256,18,0	1/1:16,19:35:48.16:766,48,0	0/0:24,0:24:39.01:0,39,523	1/1:8,18:26:36.12:575,36,0	1/1:9,13:22:27.09:431,27,0	1/1:9,21:30:48.16:766,48,0	1/1:6,14:20:33.11:527,33,0	1/1:8,17:25:30.10:479,30,0	1/1:13,7:17:21.05:291,21,0	1/1:3,11:14:30.05:450,30,0	1/1:10,21:31:60.20:957,60,0	0/0:25,0:25:50.08:0,50,633	0/0:12,0:12:15.01:0,15,218	0/0:36,0:36:26.89:0,27,252	1/1:7,11:18:33.11:527,33,0	0/0:15,0:15:19.95:0,20,352	1/1:7,11:18:27.09:431,27,0	0/0:2,0:2:3.01:0,3,50
chr10	67770644	.	G	GAAC	23798.89	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-6.843;DP=501;FS=18.505;HRun=0;HaplotypeScore=81.8707;InbreedingCoeff=0.9880;MQ=74.63;MQ0=0;MQRankSum=-8.206;QD=60.25;ReadPosRankSum=-1.081;VQSLOD=4.5243;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:49:99:0,147,2642	1/1:0,10:10:20.67:517,21,0	0/0:9,0:9:24.08:0,24,432	0/0:18,0:18:51.12:0,51,879	0/0:29,0:29:69.24:0,69,1285	1/1:2,20:22:63.04:1336,63,0	1/1:1,20:23:60.16:1424,60,0	1/1:4,17:24:63.19:1409,63,0	1/1:0,14:14:42.10:980,42,0	1/1:1,20:21:60.21:1472,60,0	1/1:0,18:19:45.02:945,45,0	1/1:0,12:13:30.02:631,30,0	1/1:1,10:11:33.11:775,33,0	1/1:0,8:8:21.07:515,21,0	1/1:0,16:16:45.15:1108,45,0	1/1:0,14:14:42.14:1034,42,0	1/1:0,17:17:39.13:959,39,0	1/1:1,18:20:48.16:1183,48,0	1/1:1,10:11:30.10:710,30,0	1/1:0,26:26:77.85:1344,78,0	1/1:1,18:20:50.96:913,51,0	1/1:1,18:19:54.10:1185,54,0	1/1:1,13:14:39.08:786,39,0	1/1:3,16:18:45.15:1068,45,0	1/1:3,18:21:60.16:1424,60,0	1/1:1,14:16:48.16:1154,48,0	1/1:0,12:12:29.83:631,30,0	1/1:0,4:4:12.04:295,12,0
chr10	67770683	.	AGATCTCTT	A	3059.45	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=7.619;DP=455;FS=5.227;HRun=0;HaplotypeScore=148.4970;InbreedingCoeff=0.9714;MQ=72.73;MQ0=0;MQRankSum=-8.647;QD=47.07;ReadPosRankSum=-0.217;VQSLOD=2.8685;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:47:99:0,135,5120	0/0:12,0:12:36.12:0,36,1599	0/0:22,0:22:59.25:0,59,2372	0/0:19,0:16:48.16:0,48,1829	0/0:22,0:22:51.16:0,51,2082	0/0:20,0:20:54.19:0,54,2374	0/0:18,0:18:48.16:0,48,2090	0/0:30,0:29:81.28:0,81,3421	0/0:13,0:13:39.09:0,39,1499	0/0:15,0:15:42.14:0,42,1841	0/0:13,0:13:33.11:0,33,1467	0/0:11,0:11:27.09:0,27,1207	1/1:1,9:10:27.09:767,27,0	0/0:9,0:9:27.06:0,27,1054	0/0:20,0:20:54.17:0,54,2266	0/0:13,0:13:36.12:0,36,1565	0/0:18,0:18:42.14:0,42,1709	0/0:18,0:18:48.16:0,48,2135	0/0:8,0:8:21.07:0,21,914	0/0:10,0:10:27.09:0,27,1161	0/0:17,0:17:48.16:0,48,1781	1/1:6,6:12:27.09:674,27,0	1/1:3,7:9:15.05:423,15,0	1/1:5,16:21:29.79:728,30,0	0/0:21,0:21:60.21:0,60,2520	1/1:5,5:10:18.06:477,18,0	0/0:12,0:12:33.11:0,33,1434	1/1:0,2:2:6.02:172,6,0
chr10	67770864	.	AG	A	326.86	PASS	AB=1.000;AC=21;AF=0.750;AN=28;BaseQRankSum=2.383;DP=213;FS=0.000;HRun=2;HaplotypeScore=44.0383;InbreedingCoeff=0.2854;MQ=30.52;MQ0=45;MQRankSum=-1.183;QD=4.81;ReadPosRankSum=-1.017;VQSLOD=0.0528;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:15,2:14:18.14:154,18,0	0/0:1,0:1:0:0,0,0	./.	0/0:74,4:10:11.83:0,12,137	1/1:16,3:17:2.06:13,2,0	1/1:3,0:3:6.12:38,6,0	1/1:2,0:2:1.55:4,2,0	./.	0/0:3,0:3:0.65:0,1,19	1/1:3,0:2:6.01:59,6,0	./.	1/1:4,0:4:0.30:61,0,0	./.	1/1:3,0:3:3.01:31,3,0	./.	0/1:7,0:7:4.03:4,0,12	1/1:5,0:3:3:27,3,0	./.	./.	./.	./.	1/1:4,0:4:1.55:4,2,0	./.	./.	./.	1/1:1,0:1:3:26,3,0	./.	./.
chr10	67770865	.	G	GA	579.81	PASS	AB=0.634;AC=21;AF=0.656;AN=32;BaseQRankSum=2.214;DP=226;FS=1.983;HRun=1;HaplotypeScore=47.9645;InbreedingCoeff=0.3250;MQ=30.58;MQ0=40;MQRankSum=-1.033;QD=9.83;ReadPosRankSum=1.082;VQSLOD=1.4667;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,11:15:16.71:276,17,0	0/0:0,1:1:0:0,0,0	./.	0/0:75,0:10:11.24:0,11,120	0/0:10,14:22:1.51:0,2,4	1/1:2,2:4:5.38:44,5,0	0/1:1,2:3:0:0,0,0	./.	0/0:2,2:4:2.72:0,3,23	1/1:1,2:2:6.02:83,6,0	./.	1/1:2,4:6:6.64:105,7,0	./.	1/1:0,2:2:3.01:46,3,0	./.	0/1:3,4:7:12.90:13,0,13	1/1:4,2:3:3.01:46,3,0	1/1:2,0:1:2.60:10,3,0	1/1:4,0:1:2.60:10,3,0	0/1:1,1:2:0:0,0,0	./.	./.	./.	./.	./.	1/1:1,1:1:3.01:48,3,0	./.	./.
chr10	67770869	.	AG	A	796.75	PASS	AB=0.889;AC=39;AF=0.848;AN=46;BaseQRankSum=1.779;DP=250;FS=1.747;HRun=2;HaplotypeScore=47.8393;InbreedingCoeff=0.2747;MQ=36.63;MQ0=37;MQRankSum=0.722;QD=6.99;ReadPosRankSum=-1.291;VQSLOD=0.4077;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:17,2:15:19.49:156,19,0	1/1:2,0:2:2.31:9,2,0	0/0:42,0:2:2.99:0,3,23	0/0:78,0:11:10.43:0,10,138	1/1:21,4:23:5.07:47,5,0	1/1:4,0:4:6.12:38,6,0	1/1:5,0:5:10.63:76,11,0	./.	0/0:4,0:4:0.59:0,1,23	1/1:4,0:3:8.61:68,9,0	./.	1/1:6,0:6:3.31:88,3,0	./.	1/1:2,0:2:3.01:30,3,0	./.	0/1:7,1:8:11.10:11,0,33	1/1:8,0:5:6.01:58,6,0	1/1:3,0:2:6.02:71,6,0	1/1:5,0:2:5.61:45,6,0	1/1:4,0:4:7.79:29,8,0	1/1:3,0:2:3.01:31,3,0	1/1:4,0:4:1.55:4,2,0	1/1:2,0:2:6.01:61,6,0	1/1:2,1:3:0.47:1,0,0	1/1:1,0:1:3.01:34,3,0	1/1:3,0:2:3:26,3,0	1/1:3,0:3:3.01:31,3,0	./.
chr10	67770870	.	G	GA	1123.24	PASS	AB=0.833;AC=40;AF=0.833;AN=48;BaseQRankSum=0.795;DP=271;FS=3.795;HRun=1;HaplotypeScore=55.8945;InbreedingCoeff=0.3101;MQ=36.30;MQ0=39;MQRankSum=2.266;QD=8.64;ReadPosRankSum=0.202;VQSLOD=0.9640;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,13:15:18.04:265,18,0	1/1:1,1:2:2.12:9,2,0	0/0:47,0:3:2.99:0,3,23	0/0:77,1:11:11.26:0,11,133	1/1:9,18:25:3.21:40,3,0	1/1:1,3:4:5.38:55,5,0	1/1:1,4:5:8.51:75,9,0	1/1:4,1:2:2.84:14,3,0	0/0:1,3:4:2.68:0,3,27	1/1:3,2:4:8.62:102,9,0	./.	1/1:1,6:7:6.70:133,7,0	./.	1/1:1,2:3:3.01:46,3,0	./.	0/1:4,4:8:4.11:4,0,35	1/1:6,3:5:6.02:76,6,0	1/1:2,1:2:6.02:89,6,0	1/1:4,2:3:8.61:84,9,0	1/1:2,2:4:7.69:29,8,0	1/1:3,1:3:5.60:41,6,0	./.	1/1:2,0:2:6.01:61,6,0	0/1:3,0:3:0:0,0,0	1/1:2,0:2:1.04:31,1,0	1/1:2,2:3:3.01:48,3,0	1/1:4,0:3:3.01:31,3,0	1/1:4,0:2:2.50:9,2,0
chr10	67770874	.	AG	A	1181.16	PASS	AB=1.000;AC=45;AF=0.865;AN=52;BaseQRankSum=0.850;DP=305;FS=5.582;HRun=2;HaplotypeScore=56.2320;InbreedingCoeff=0.4053;MQ=44.82;MQ0=38;MQRankSum=1.149;QD=7.03;ReadPosRankSum=-0.061;VQSLOD=0.6510;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:10,9:16:19.51:157,20,0	1/1:1,1:2:2.72:26,3,0	0/0:48,0:5:8.05:0,8,72	0/0:79,0:16:17.86:0,18,195	1/1:27,3:28:8.01:65,8,0	1/1:5,1:6:9.11:63,9,0	1/1:6,1:7:13.42:120,13,0	1/1:5,1:3:5.93:41,6,0	1/1:3,1:4:0.26:1,0,0	1/1:2,4:5:15:145,15,0	0/0:1,3:4:0:0,0,0	1/1:6,1:7:3.19:89,3,0	./.	1/1:4,0:4:3.01:31,3,0	./.	1/1:4,4:8:10.49:48,10,0	1/1:8,1:5:6.48:59,6,0	1/1:4,1:4:5.65:70,6,0	1/1:6,1:4:11.44:96,11,0	1/1:0,4:4:8.98:74,9,0	1/1:6,0:5:5.99:53,6,0	1/1:5,1:6:1.55:4,2,0	1/1:4,0:4:6.01:61,6,0	1/1:4,0:4:0.47:1,0,0	1/1:9,0:8:2.66:33,3,0	0/1:6,0:5:0.08:1,0,0	1/1:4,0:3:3.01:31,3,0	1/1:3,1:2:3:27,3,0
chr10	67770875	.	G	GA	1919.99	PASS	AB=0.764;AC=41;AF=0.820;AN=50;BaseQRankSum=-0.402;DP=325;FS=8.050;HRun=1;HaplotypeScore=64.2969;InbreedingCoeff=0.3758;MQ=45.29;MQ0=38;MQRankSum=0.877;QD=10.49;ReadPosRankSum=1.025;VQSLOD=1.1114;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,10:17:18.06:281,18,0	1/1:1,1:2:2.53:47,3,0	0/0:46,0:5:8.05:0,8,68	0/0:78,1:17:17.75:0,18,187	1/1:6,25:29:3.57:79,4,0	1/1:6,3:8:8.38:80,8,0	1/1:3,6:9:15.05:205,15,0	1/1:5,2:4:8.97:85,9,0	0/0:2,2:4:0.92:0,1,2	1/1:6,1:6:15.04:204,15,0	0/1:4,0:4:0:0,0,0	1/1:1,6:7:6.40:133,6,0	./.	1/1:1,4:5:3.01:46,3,0	./.	1/1:7,2:9:5.85:61,6,0	1/1:4,5:5:6.49:92,6,0	1/1:5,0:4:5.95:89,6,0	1/1:4,5:6:14.08:185,14,0	1/1:4,0:4:9.03:143,9,0	1/1:3,6:8:6.02:92,6,0	./.	1/1:2,5:7:6.02:90,6,0	0/1:2,2:4:0:0,0,0	0/1:4,6:9:6.79:29,0,7	1/1:5,1:6:1.40:5,1,0	1/1:2,3:4:3.01:45,3,0	1/1:3,1:2:3.01:48,3,0
chr10	67771152	.	CTTGT	C	7188.75	PASS	AB=0.581;AC=19;AF=0.352;AN=54;BaseQRankSum=12.668;DP=684;FS=6.605;HRun=0;HaplotypeScore=119.5893;InbreedingCoeff=0.9110;MQ=67.74;MQ0=3;MQRankSum=0.831;QD=27.86;ReadPosRankSum=1.631;VQSLOD=4.3911;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,33:44:87.30:1406,87,0	1/1:3,9:12:21.07:339,21,0	0/0:25,0:21:9.03:0,9,205	0/0:24,0:20:21.07:0,21,449	1/1:11,17:28:30.10:485,30,0	0/0:23,0:23:51.18:0,51,1233	0/0:21,0:21:51.18:0,51,1231	1/1:20,12:32:36.12:579,36,0	0/0:20,0:20:42.14:0,42,984	0/0:39,1:40:38.82:0,39,1901	0/0:17,0:17:30.10:0,30,670	0/0:34,0:34:72.25:0,72,1684	1/1:3,10:14:33.11:512,33,0	0/0:32,0:32:75.26:0,75,1811	0/0:22,0:22:42.14:0,42,983	0/0:18,0:18:45.15:0,45,1088	1/1:6,17:23:48.16:776,48,0	0/1:7,18:25:11.52:631,0,12	0/0:21,0:21:15.05:0,15,358	0/0:32,1:33:26.78:0,27,1651	0/0:19,0:19:51.17:0,51,1171	1/1:3,24:27:66.18:1037,66,0	1/1:10,11:21:22.87:358,23,0	1/1:9,23:32:66.23:1066,66,0	0/0:20,0:20:54.19:0,54,1288	0/0:22,0:35:69.24:0,69,1363	0/0:15,0:15:39.13:0,39,942	./.
chr10	67771559	.	TTGTTTTG	T	4413.31	PASS	AB=1.000;AC=31;AF=0.554;AN=56;BaseQRankSum=1.480;DP=630;FS=23.534;HRun=0;HaplotypeScore=147.7685;InbreedingCoeff=0.5996;MQ=55.97;MQ0=25;MQRankSum=-1.106;QD=10.92;ReadPosRankSum=-3.431;VQSLOD=0.8996;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:43:99:0,102,2070	0/1:7,0:7:28.07:28,0,270	0/0:52,0:18:26.06:0,26,329	0/1:50,0:11:4.59:5,0,60	0/0:29,0:29:77.88:0,78,1547	1/1:18,3:21:45.51:424,46,0	1/1:9,3:12:1.56:315,2,0	0/1:35,0:33:99:105,0,758	0/0:21,0:21:12.66:0,13,660	1/1:23,6:28:43.57:556,44,0	1/1:5,12:17:23.41:299,23,0	1/1:18,0:17:38.22:289,38,0	0/0:13,0:13:38.96:0,39,398	1/1:4,16:18:21.12:369,21,0	1/1:1,12:12:9.03:168,9,0	1/1:16,4:20:35.13:347,35,0	0/1:31,0:28:64.61:65,0,227	0/1:14,0:13:39.53:40,0,261	1/1:16,11:23:36.64:339,37,0	1/1:29,4:32:46.38:470,46,0	1/1:12,1:10:16.93:77,17,0	0/0:11,0:10:30.08:0,30,355	0/0:18,0:18:54.07:0,54,632	0/0:13,0:13:30.01:0,30,396	1/1:5,11:16:10.95:128,11,0	0/0:18,0:18:39.37:0,39,669	1/1:10,18:27:8.74:391,9,0	0/0:5,0:5:15.02:0,15,172
chr10	67771564	.	TTG	T	543.17	PASS	AB=0.968;AC=16;AF=0.286;AN=56;BaseQRankSum=7.264;DP=636;FS=29.987;HRun=0;HaplotypeScore=112.4502;InbreedingCoeff=-0.2550;MQ=49.66;MQ0=30;MQRankSum=-7.514;QD=1.56;ReadPosRankSum=-0.611;VQSLOD=0.0525;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:43:91.67:0,92,627	0/0:5,0:5:14.72:0,15,156	0/0:52,0:11:3.19:0,3,88	0/1:53,0:10:16.05:16,0,27	0/0:30,0:30:48.85:0,49,434	0/1:20,1:21:25.63:26,0,191	0/1:12,2:14:58.81:99,0,59	0/0:35,0:33:26.07:0,26,547	0/1:19,1:19:72.74:73,0,168	0/1:27,3:28:93.29:93,0,251	0/1:17,0:17:6.86:7,0,72	0/1:18,0:17:84.15:84,0,117	0/0:9,0:9:25.36:0,25,150	0/1:20,0:18:21.63:25,0,22	1/1:15,0:12:5.29:35,5,0	0/1:19,1:20:49.06:49,0,181	0/0:32,0:29:26.20:0,26,276	0/1:17,0:14:2.58:3,0,152	0/1:29,0:25:55.26:55,0,217	0/1:32,1:31:86.22:86,0,306	0/1:13,1:11:26.98:27,0,126	0/0:11,0:10:29.24:0,29,175	0/0:17,0:17:47.02:0,47,297	0/0:13,0:13:26.64:0,27,185	0/0:14,0:14:7.70:0,8,68	0/0:19,0:19:39.31:0,39,312	0/1:27,0:26:21.15:21,0,68	0/0:4,0:4:11.79:0,12,75
chr10	67771572	.	T	TTTTTTG	935.24	PASS	AB=0.983;AC=15;AF=0.268;AN=56;BaseQRankSum=-2.011;DP=634;FS=16.035;HRun=0;HaplotypeScore=179.2031;InbreedingCoeff=0.1071;MQ=46.10;MQ0=41;MQRankSum=-2.285;QD=3.43;ReadPosRankSum=-2.082;VQSLOD=1.6227;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:43:52.14:0,52,836	1/1:5,0:5:9.23:104,9,0	0/0:53,0:10:5.93:0,6,91	0/1:50,0:8:21.98:22,0,31	0/0:27,0:27:51.82:0,52,656	0/1:18,0:18:5.93:6,0,311	0/1:16,0:14:21.66:22,0,220	0/1:28,0:31:61.83:318,0,62	0/0:24,0:23:48.35:0,48,497	0/0:30,0:28:12.56:0,13,370	0/0:16,0:16:10.14:0,10,223	0/1:20,0:19:27.10:27,0,151	0/0:9,0:9:16.12:0,16,103	0/0:20,0:18:11.59:0,12,279	0/1:17,0:13:0.16:0,0,110	0/1:19,0:18:5.95:6,0,181	1/1:19,15:35:5.80:415,6,0	1/1:12,0:14:0.03:152,0,0	0/0:28,0:23:23.84:0,24,282	0/1:26,0:23:2.42:2,0,336	0/0:16,0:12:5.95:0,6,68	0/0:11,0:10:4.22:0,4,24	0/0:15,0:15:21.14:0,21,148	0/1:11,0:10:2.23:2,0,28	0/0:14,0:13:6.02:0,6,101	0/0:16,0:16:22.04:0,22,219	0/0:30,0:27:16.24:0,16,432	0/0:6,0:3:0:0,0,1
chr10	67771895	.	G	GT	1985.86	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=-7.982;DP=503;FS=0.000;HRun=9;HaplotypeScore=52.9215;InbreedingCoeff=0.8162;MQ=72.80;MQ0=0;MQRankSum=0.292;QD=18.91;ReadPosRankSum=0.501;VQSLOD=3.6490;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:59.98:0,60,521	0/0:8,0:8:20.99:0,21,182	0/0:15,0:13:0.34:0,0,132	0/1:12,0:11:6.26:6,0,92	0/0:30,0:30:77.97:0,78,677	0/0:20,0:20:56.99:0,57,495	0/0:13,0:13:35.97:0,36,308	0/0:41,0:41:60.38:0,60,657	0/0:21,0:21:53.98:0,54,469	0/0:23,0:23:53.97:0,54,469	0/0:19,0:19:47.98:0,48,417	0/0:15,0:15:35.98:0,36,312	1/1:1,9:10:24.06:265,24,0	0/0:13,0:13:29.97:0,30,257	0/0:19,0:19:56.99:0,57,495	0/0:15,0:15:35.97:0,36,309	0/0:17,0:17:44.99:0,45,390	0/0:16,0:16:41.92:0,42,356	0/0:19,0:20:50.02:0,50,423	0/0:16,1:17:6.37:0,6,280	0/0:15,0:15:44.99:0,45,391	1/1:5,8:13:21.06:231,21,0	1/1:1,12:13:7.03:302,7,0	1/1:5,11:15:30.08:332,30,0	0/0:19,1:19:5.64:0,6,273	1/1:0,11:11:30.06:320,30,0	0/0:20,0:20:50.98:0,51,443	1/1:5,25:30:23.09:711,23,0
chr10	67772856	.	TACACAC	T	2907.76	PASS	AB=0.899;AC=38;AF=0.826;AN=46;BaseQRankSum=2.389;DP=526;FS=20.372;HRun=0;HaplotypeScore=141.7948;InbreedingCoeff=0.4560;MQ=62.97;MQ0=10;MQRankSum=-4.344;QD=7.80;ReadPosRankSum=-0.078;VQSLOD=1.4981;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:31:24.06:0,24,564	1/1:2,2:4:6.02:121,6,0	./.	./.	0/0:26,0:25:30.09:0,30,719	1/1:13,8:21:15.14:303,15,0	0/1:18,2:20:17.98:18,0,67	1/1:23,0:20:3.01:45,3,0	0/0:12,0:15:10.86:0,11,121	1/1:11,7:17:18.01:255,18,0	./.	1/1:13,6:19:12.04:223,12,0	1/1:8,0:16:21.07:293,21,0	./.	1/1:11,6:14:6.02:121,6,0	1/1:10,13:21:9.03:182,9,0	1/1:25,2:27:5.33:124,5,0	0/1:14,0:15:53.25:53,0,68	1/1:14,1:14:2.70:59,3,0	1/1:12,5:17:9.03:163,9,0	1/1:19,0:20:12.45:116,12,0	1/1:14,0:22:11.48:166,11,0	1/1:9,0:16:15.05:209,15,0	1/1:11,0:15:9.03:125,9,0	1/1:9,5:15:15.05:265,15,0	1/1:15,0:18:9.03:126,9,0	1/1:19,6:23:6:86,6,0	./.
chr10	67773153	.	TAA	T	2367.34	PASS	AB=0.950;AC=13;AF=0.232;AN=56;BaseQRankSum=10.139;DP=569;FS=0.432;HRun=12;HaplotypeScore=73.2425;InbreedingCoeff=0.8571;MQ=61.52;MQ0=2;MQRankSum=-4.918;QD=17.80;ReadPosRankSum=3.429;VQSLOD=2.8738;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:60.65:0,61,853	0/0:4,0:4:9.03:0,9,134	0/1:18,0:11:4.25:4,0,137	0/0:9,0:8:13.23:0,13,148	0/0:24,0:26:68.63:0,69,925	0/0:15,0:17:41.07:0,41,529	0/0:16,0:17:41.61:0,42,570	0/0:34,0:34:66.22:0,66,980	0/0:12,0:12:30.10:0,30,448	0/0:24,0:24:57.15:0,57,807	0/0:17,0:17:42.14:0,42,613	0/0:18,0:21:54.44:0,54,683	1/1:6,18:23:45.05:458,45,0	0/0:20,0:22:62.17:0,62,847	0/0:22,0:23:53.43:0,53,769	0/0:25,0:25:66.19:0,66,960	0/0:25,0:27:62.18:0,62,857	0/0:35,0:33:95.93:0,96,1283	0/0:17,0:19:41.11:0,41,538	0/0:27,0:28:77.71:0,78,1050	0/0:15,0:15:39.11:0,39,544	1/1:2,19:21:57.11:577,57,0	1/1:4,11:16:23.74:296,24,0	1/1:3,13:16:33.54:337,34,0	0/0:12,0:14:38.59:0,39,492	1/1:2,16:19:0.18:416,0,0	0/0:23,0:23:62.68:0,63,883	1/1:1,16:17:45.09:458,45,0
chr10	67773305	.	CAA	C	3555.90	PASS	AB=0.545;AC=23;AF=0.500;AN=46;BaseQRankSum=-3.657;DP=440;FS=32.261;HRun=12;HaplotypeScore=72.3568;InbreedingCoeff=0.8106;MQ=50.93;MQ0=31;MQRankSum=0.165;QD=18.05;ReadPosRankSum=2.206;VQSLOD=0.4385;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,120,1630	0/0:0,0:7:7.07:0,7,25	0/0:8,0:6:1.97:0,2,134	0/0:5,0:5:11.01:0,11,114	0/0:22,0:24:59.15:0,59,777	1/1:5,17:20:42.05:426,42,0	1/1:6,8:13:21.01:214,21,0	0/0:9,0:34:57.14:0,57,200	0/0:6,0:13:32.78:0,33,282	1/1:1,11:11:30.06:305,30,0	1/1:5,15:20:7.34:362,7,0	0/1:3,2:18:25.20:25,0,69	./.	0/0:3,0:18:26.17:0,26,160	1/1:7,27:31:77.89:771,78,0	1/1:3,10:13:27.04:274,27,0	0/0:6,0:20:41.20:0,41,215	0/0:18,0:31:38.64:0,39,212	1/1:4,7:11:17.97:183,18,0	1/1:5,11:13:24.02:244,24,0	1/1:3,13:15:33.06:334,33,0	./.	./.	./.	0/0:5,0:9:14.85:0,15,52	1/1:1,1:1:3.01:31,3,0	1/1:3,15:16:39.07:388,39,0	./.
chr10	67774730	.	CGATCTGGCGCGGGGGAGCTG	C	5442.32	PASS	AB=0.835;AC=34;AF=0.739;AN=46;BaseQRankSum=5.153;DP=251;FS=3.099;HRun=0;HaplotypeScore=161.4382;InbreedingCoeff=0.2399;MQ=68.46;MQ0=13;MQRankSum=-3.197;QD=33.39;ReadPosRankSum=4.688;VQSLOD=3.9131;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/1:3,2:5:10.14:164,0,10	0/1:38,0:8:13.16:13,0,371	0/0:47,0:14:21.86:0,22,546	1/1:6,2:11:2.99:26,3,0	1/1:8,2:11:3.01:169,3,0	0/0:3,0:5:2.90:0,3,16	1/1:2,0:2:2.94:18,3,0	1/1:0,6:6:3.01:162,3,0	1/1:4,5:9:6.15:615,6,0	0/1:4,0:4:0:0,0,0	./.	1/1:7,0:8:11.61:463,12,0	1/1:2,4:6:3.01:167,3,0	0/0:1,11:12:2.94:0,3,18	1/1:2,6:8:12.04:419,12,0	1/1:3,0:3:3.01:169,3,0	1/1:2,6:8:9.03:315,9,0	0/1:2,1:5:2.66:447,0,3	1/1:4,8:13:2.69:167,3,0	0/0:2,0:2:0:0,0,0	./.	./.	./.	1/1:3,1:4:3.01:168,3,0	1/1:3,0:4:12.04:482,12,0	1/1:11,0:12:9.86:703,10,0	1/1:2,0:6:18.06:776,18,0
chr10	67774735	.	TGGCGCGGGGGAG	T	4870.51	PASS	AB=0.794;AC=36;AF=0.900;AN=40;BaseQRankSum=2.906;DP=236;FS=0.000;HRun=0;HaplotypeScore=140.8823;InbreedingCoeff=0.2801;MQ=69.95;MQ0=12;MQRankSum=-3.196;QD=30.83;ReadPosRankSum=3.865;VQSLOD=3.4390;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	1/1:4,0:4:3.01:113,3,0	0/1:36,0:8:49.90:50,0,254	0/0:42,0:14:17.31:0,17,509	0/1:3,7:10:0:0,0,0	1/1:6,5:11:3.01:114,3,0	./.	1/1:2,0:2:0.89:2,1,0	1/1:6,0:6:3.01:108,3,0	1/1:8,1:9:17.54:500,18,0	1/1:0,4:4:1.25:3,1,0	./.	1/1:1,6:7:11.74:468,12,0	1/1:6,0:6:3.01:115,3,0	./.	1/1:6,2:8:12.04:407,12,0	1/1:1,2:3:3.01:113,3,0	1/1:6,2:8:9.03:350,9,0	1/1:3,2:5:11.52:343,12,0	1/1:10,3:13:2.99:114,3,0	./.	./.	./.	./.	1/1:2,2:4:3.01:114,3,0	1/1:1,3:4:12.04:454,12,0	1/1:3,9:12:21.96:823,22,0	1/1:3,3:6:18.06:680,18,0
chr10	67774981	.	A	AGTGTGT	3396.70	PASS	AB=0.898;AC=39;AF=0.780;AN=50;BaseQRankSum=-3.018;DP=516;FS=4.117;HRun=0;HaplotypeScore=137.5374;InbreedingCoeff=0.4218;MQ=62.64;MQ0=14;MQRankSum=-1.160;QD=8.51;ReadPosRankSum=-0.898;VQSLOD=2.3930;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:20:2.28:51,2,0	./.	./.	./.	1/1:17,0:17:5.26:100,5,0	1/1:11,6:19:9.03:283,9,0	1/1:18,0:18:3.01:96,3,0	0/1:28,0:27:0:0,0,0	0/0:4,0:7:3.01:0,3,42	1/1:20,0:19:21.02:289,21,0	1/1:10,0:16:5.29:125,5,0	1/1:12,1:13:5.85:110,6,0	1/1:21,0:21:12.04:242,12,0	1/1:9,0:13:3.01:39,3,0	1/1:11,1:19:18.06:506,18,0	1/1:11,7:20:3.48:97,3,0	0/0:17,0:26:16.56:0,17,141	0/1:19,0:18:78.25:80,0,78	1/1:20,0:20:12.04:255,12,0	1/1:23,0:23:10.86:225,11,0	1/1:10,0:15:3.01:38,3,0	1/1:12,0:11:3.01:63,3,0	0/1:13,0:19:0.26:0,0,0	1/1:19,1:26:6.02:156,6,0	1/1:10,4:15:3.01:81,3,0	0/0:15,0:19:9.03:0,9,119	1/1:12,9:22:21.03:558,21,0	0/0:6,0:13:8.91:0,9,125
chr10	67775440	.	AAGAC	A	847.50	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.229;DP=621;FS=2.205;HRun=0;HaplotypeScore=99.2051;InbreedingCoeff=0.9936;MQ=85.12;MQ0=1;MQRankSum=-2.874;QD=52.97;ReadPosRankSum=1.730;VQSLOD=4.8792;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:56:99:0,169,4595	0/0:9,0:9:24.08:0,24,670	0/0:30,0:30:87.25:0,87,2143	0/0:21,0:21:60.21:0,60,1439	0/0:20,0:20:60.21:0,60,1714	0/0:11,0:11:33.11:0,33,880	0/0:21,0:21:63.17:0,63,1664	0/0:35,0:35:99:0,99,2806	1/1:0,16:15:45.15:942,45,0	0/0:27,0:27:81.28:0,81,2331	0/0:14,0:14:42.13:0,42,1138	0/0:17,0:17:51.18:0,51,1453	0/0:14,0:14:42.14:0,42,1215	0/0:21,0:21:63.22:0,63,1824	0/0:22,0:22:66.23:0,66,1879	0/0:26,0:26:78.25:0,78,2110	0/0:25,0:25:75.26:0,75,2105	0/0:28,0:28:81.28:0,81,2270	0/0:16,0:16:48.15:0,48,1312	0/0:15,0:15:45.14:0,45,1227	0/0:27,0:27:81.23:0,81,2199	0/0:17,0:17:51.18:0,51,1459	0/0:18,0:18:54.19:0,54,1500	0/0:41,0:41:99:0,123,3493	0/0:14,0:14:42.14:0,42,1177	0/0:30,0:30:90.30:0,90,2550	0/0:23,0:22:69.24:0,69,1949	0/0:7,0:7:21.07:0,21,609
chr10	67778357	.	CT	C	1465.21	PASS	AB=0.788;AC=18;AF=0.346;AN=52;BaseQRankSum=9.152;DP=518;FS=6.399;HRun=13;HaplotypeScore=65.6291;InbreedingCoeff=0.7433;MQ=56.22;MQ0=9;MQRankSum=-0.416;QD=7.25;ReadPosRankSum=-0.776;VQSLOD=2.1781;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:38:86.78:0,87,804	1/1:1,5:6:14.91:109,15,0	./.	./.	0/0:20,0:21:40.14:0,40,363	0/0:19,0:19:48.08:0,48,467	0/0:16,2:18:10.99:0,11,254	1/1:11,17:25:49.74:365,50,0	0/0:11,0:11:0:0,0,0	0/0:18,1:19:23.16:0,23,384	0/0:17,0:18:41.85:0,42,383	0/0:8,0:9:11.86:0,12,102	1/1:20,0:20:19.87:45,20,0	0/0:11,0:11:19.58:0,20,179	0/0:22,0:23:39.01:0,39,369	0/0:14,0:14:32.96:0,33,301	1/1:6,23:29:53.53:384,54,0	0/1:10,28:36:11.90:498,0,12	0/0:22,0:21:24.98:0,25,378	0/0:26,0:27:59.98:0,60,555	0/0:7,0:7:15.50:0,15,146	1/1:5,0:5:3.70:8,4,0	1/1:12,0:11:12.15:30,12,0	1/1:16,0:14:8.71:21,9,0	0/0:26,0:26:38.16:0,38,497	0/1:32,0:31:26.23:113,0,26	0/0:25,0:26:59.87:0,60,552	1/1:15,0:15:8.89:80,9,0
chr10	67778369	.	TTA	T	1400.15	PASS	AB=1.000;AC=11;AF=0.220;AN=50;BaseQRankSum=5.419;DP=507;FS=10.837;HRun=0;HaplotypeScore=71.5278;InbreedingCoeff=0.8101;MQ=51.18;MQ0=24;MQRankSum=3.213;QD=13.33;ReadPosRankSum=1.442;VQSLOD=2.6506;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:33:90.28:0,90,1459	0/0:6,0:6:17.54:0,18,102	./.	./.	0/0:21,0:21:51.73:0,52,708	0/0:22,0:21:60.01:0,60,919	0/0:15,0:13:35.97:0,36,548	0/0:30,0:25:53.14:0,53,455	./.	0/0:18,0:17:50.98:0,51,767	0/0:22,0:21:50.91:0,51,738	0/0:10,0:10:26.88:0,27,309	1/1:2,17:18:48.16:634,48,0	0/0:12,0:12:32.36:0,32,414	0/0:22,0:22:51.05:0,51,780	0/0:14,0:14:36.52:0,37,557	0/0:29,0:27:46.43:0,46,366	0/0:38,0:36:99:0,100,717	0/0:22,0:20:59.48:0,59,784	0/0:28,0:28:79.24:0,79,1128	0/0:7,0:7:15.52:0,16,264	1/1:0,5:5:8.99:119,9,0	1/1:3,14:15:23.98:279,24,0	1/1:3,9:9:21.07:278,21,0	0/0:24,0:24:50.18:0,50,1001	0/1:36,0:34:30.31:209,0,30	0/0:24,0:24:72.17:0,72,1108	1/1:16,0:14:1.64:42,2,0
chr10	67778370	.	TA	T	1406.36	PASS	AC=12;AF=0.240;AN=50;BaseQRankSum=6.631;DP=500;FS=2.283;HRun=3;HaplotypeScore=65.4205;InbreedingCoeff=0.9601;MQ=50.62;MQ0=24;MQRankSum=1.950;QD=13.65;ReadPosRankSum=1.751;VQSLOD=2.6382;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:32:84.15:0,84,987	0/0:6,0:6:6.71:0,7,31	./.	./.	0/0:18,0:18:47.80:0,48,495	0/0:22,0:21:60:0,60,682	0/0:15,0:13:30.65:0,31,380	0/0:30,0:25:40.12:0,40,217	./.	0/0:17,0:16:47.27:0,47,538	0/0:21,0:20:50.84:0,51,532	0/0:10,0:10:26.78:0,27,231	1/1:18,1:18:47.04:284,47,0	0/0:11,0:11:29.31:0,29,283	0/0:22,0:22:50.92:0,51,563	0/0:14,0:14:36.01:0,36,410	0/0:29,0:27:21.27:0,21,116	0/0:38,0:36:39:0,39,267	0/0:23,0:21:53.13:0,53,562	0/0:30,0:30:73.17:0,73,796	0/0:7,0:7:15.05:0,15,190	1/1:5,0:5:8.83:54,9,0	1/1:17,0:15:18.36:120,18,0	1/1:12,0:9:20.59:124,21,0	0/0:23,0:23:65.98:0,66,738	1/1:5,29:32:59.82:745,60,0	0/0:25,0:25:72.01:0,72,794	1/1:4,12:14:20.89:256,21,0
chr10	67778994	.	C	CT	4356.14	PASS	AB=0.785;AC=38;AF=0.679;AN=56;BaseQRankSum=-5.805;DP=505;FS=0.000;HRun=13;HaplotypeScore=62.4954;InbreedingCoeff=0.6414;MQ=83.92;MQ0=1;MQRankSum=-0.289;QD=12.00;ReadPosRankSum=0.316;VQSLOD=4.6058;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:21:49.63:0,50,335	0/0:8,0:8:14.86:0,15,103	0/0:29,1:25:7.47:0,7,63	0/1:22,0:16:5.91:6,0,13	0/0:22,0:22:55.23:0,55,359	1/1:3,12:16:32.87:293,33,0	1/1:2,9:12:5.41:163,5,0	0/0:22,0:22:29.68:0,30,205	0/0:0,0:15:30.56:0,31,89	1/1:8,17:25:21.46:342,21,0	1/1:7,18:28:8.99:382,9,0	0/1:2,7:9:20.14:118,0,20	1/1:3,8:11:21.02:195,21,0	1/1:2,10:12:27.02:248,27,0	1/1:4,11:15:22.27:198,22,0	1/1:7,9:18:11.02:120,11,0	0/0:24,0:24:47.51:0,48,327	0/1:9,1:10:4.03:4,0,118	1/1:11,13:25:41.83:357,42,0	1/1:5,13:20:32.67:269,33,0	1/1:3,6:9:14.78:114,15,0	1/1:3,10:14:6.29:186,6,0	1/1:6,10:16:3.44:175,3,0	0/1:6,6:12:5.56:96,0,6	1/1:6,16:21:23.68:294,24,0	1/1:10,13:23:33.03:305,33,0	1/1:1,21:23:29.86:260,30,0	1/1:6,15:21:9.45:230,9,0
chr10	67780266	.	C	CGGCCACAGGCTCTCGCT	2275.33	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=0.318;DP=671;FS=7.594;HRun=0;HaplotypeScore=287.5609;InbreedingCoeff=0.9979;MQ=84.43;MQ0=0;MQRankSum=-4.591;QD=78.46;ReadPosRankSum=0.353;VQSLOD=2.1515;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,105,4226	0/0:12,0:12:36.11:0,36,1516	0/0:23,0:23:60.17:0,60,1811	0/0:20,0:20:25.36:0,25,1056	0/0:40,0:40:99:0,102,3496	0/0:15,0:15:42.09:0,42,1657	0/0:32,0:32:87.07:0,87,2872	0/0:22,0:22:57.10:0,57,1799	1/1:7,8:29:36.12:2370,36,0	0/0:28,0:28:75.12:0,75,2673	0/0:14,0:14:39.13:0,39,1676	0/0:25,0:25:60.14:0,60,2681	0/0:19,0:19:48.14:0,48,2047	0/0:14,0:14:36.09:0,36,1384	0/0:29,0:29:87.23:0,87,3839	0/0:25,0:25:72.12:0,72,3049	0/0:30,0:30:81.24:0,81,3615	0/0:14,0:14:39.09:0,39,1678	0/0:24,0:24:68.91:0,69,1993	0/0:20,0:20:60.07:0,60,2321	0/0:28,0:28:71.97:0,72,2458	0/0:18,0:18:51.13:0,51,2252	0/0:23,0:23:63.14:0,63,2425	0/0:39,0:38:99:0,114,5052	0/0:23,0:23:66.21:0,66,2640	0/0:30,0:30:87.24:0,87,3515	0/0:23,0:23:66.17:0,66,2950	0/0:14,0:14:41.89:0,42,1331
chr10	67780437	.	CT	C	2780.34	PASS	AB=0.917;AC=16;AF=0.286;AN=56;BaseQRankSum=14.252;DP=627;FS=2.081;HRun=11;HaplotypeScore=79.4427;InbreedingCoeff=0.8316;MQ=72.03;MQ0=0;MQRankSum=-0.769;QD=13.76;ReadPosRankSum=4.234;VQSLOD=4.1852;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:30:71.96:0,72,725	0/0:11,0:11:24.06:0,24,256	0/0:16,2:17:4.76:0,5,174	0/1:13,1:14:3.10:3,0,168	0/0:23,1:24:35.49:0,35,571	0/0:23,0:26:65.96:0,66,671	0/0:22,0:24:59.14:0,59,648	0/0:34,1:35:44.56:0,45,654	1/1:4,22:26:58.72:473,59,0	0/0:22,0:22:50.46:0,50,533	0/0:22,0:23:53.96:0,54,527	0/0:17,0:17:42.09:0,42,435	1/1:6,21:28:64.92:523,65,0	0/0:16,0:16:48.05:0,48,472	0/1:23,3:27:10.95:11,0,490	0/0:18,0:18:48.12:0,48,512	0/0:21,0:21:54.11:0,54,576	0/0:19,2:23:16.52:0,17,534	0/0:27,1:29:37.64:0,38,597	0/0:22,2:25:13.45:0,13,497	0/0:17,0:17:42.10:0,42,443	1/1:2,15:17:44.93:369,45,0	1/1:8,10:18:29.92:246,30,0	1/1:5,27:33:73.95:597,74,0	0/0:15,0:15:36.06:0,36,367	1/1:4,13:17:35.92:296,36,0	0/0:30,0:30:78.14:0,78,796	1/1:1,18:22:59.83:460,60,0
chr10	67781056	.	CT	C	21714.52	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=6.402;DP=743;FS=5.579;HRun=2;HaplotypeScore=83.3023;InbreedingCoeff=0.9914;MQ=73.06;MQ0=0;MQRankSum=-5.960;QD=35.42;ReadPosRankSum=5.330;VQSLOD=5.1664;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:60,0:60:99:0,172,2541	1/1:0,12:12:36.12:467,36,0	0/0:25,0:25:73.39:0,73,984	0/0:25,0:25:72.24:0,72,1061	0/0:20,0:20:57.17:0,57,814	1/1:0,19:19:51.17:662,51,0	1/1:0,34:34:99:1285,99,0	1/1:2,31:33:93.26:1162,93,0	1/1:0,32:32:93.30:1207,93,0	1/1:0,18:18:51.17:662,51,0	1/1:1,25:26:66.21:855,66,0	1/1:0,32:32:87.28:1129,87,0	1/1:1,37:38:99:1324,102,0	1/1:0,24:24:66.21:857,66,0	1/1:0,32:32:96.31:1246,96,0	1/1:1,20:21:60.20:779,60,0	1/1:0,37:37:99:1363,105,0	1/1:0,16:16:42.14:543,42,0	1/1:0,25:25:72.14:896,72,0	1/1:1,20:21:51.17:662,51,0	1/1:0,46:46:99:1558,120,0	1/1:0,19:19:51.14:661,51,0	1/1:0,25:25:66.19:855,66,0	1/1:0,34:34:93.30:1207,93,0	1/1:0,21:21:60.19:777,60,0	1/1:1,16:17:48.16:623,48,0	1/1:0,26:26:60.20:779,60,0	1/1:0,5:5:12.04:155,12,0
chr10	67783121	.	T	TAGC	1465.57	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-7.178;DP=751;FS=3.736;HRun=0;HaplotypeScore=126.2477;InbreedingCoeff=0.9908;MQ=78.89;MQ0=0;MQRankSum=-0.373;QD=43.11;ReadPosRankSum=-0.872;VQSLOD=5.0754;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:96.32:0,96,1422	0/0:15,0:15:33.11:0,33,489	0/0:17,0:17:20.97:0,21,225	0/0:23,0:24:28.59:0,29,340	0/0:19,0:19:36.09:0,36,477	0/0:20,0:20:39.11:0,39,558	0/0:26,0:26:57.19:0,57,841	0/0:31,0:31:74.74:0,75,1076	0/0:26,0:26:69.23:0,69,1024	0/0:29,0:29:66.21:0,66,961	0/0:31,0:31:51.13:0,51,755	0/0:31,0:31:87.29:0,87,1291	0/0:23,0:23:69.23:0,69,1024	0/0:31,0:31:84.24:0,84,1185	0/0:37,0:37:87.26:0,87,1248	0/0:38,0:38:99:0,99,1449	0/0:41,0:41:99:0,108,1552	0/0:25,0:25:69.23:0,69,1018	0/0:27,0:27:48.15:0,48,692	0/0:13,0:13:21.06:0,21,292	0/0:56,0:56:99:0,147,2155	0/0:25,0:25:57.11:0,57,799	0/0:14,0:14:30.10:0,30,445	0/0:28,0:27:72.24:0,72,1067	0/0:24,0:24:54.18:0,54,801	1/1:8,19:27:60.21:1210,60,0	0/0:23,0:23:60.20:0,60,890	1/1:1,6:7:18.06:375,18,0
chr10	67783469	.	C	CT	1670.61	PASS	AB=0.853;AC=37;AF=0.661;AN=56;BaseQRankSum=-2.442;DP=638;FS=0.528;HRun=17;HaplotypeScore=84.6758;InbreedingCoeff=0.1835;MQ=64.60;MQ0=9;MQRankSum=0.262;QD=3.46;ReadPosRankSum=-2.684;VQSLOD=-0.5036;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:16,4:22:25.29:25,0,27	0/0:6,0:9:10.91:0,11,38	0/0:75,0:20:12.87:0,13,60	0/1:44,0:19:6.19:6,0,56	0/0:15,1:19:0.25:0,0,71	1/1:18,8:26:10.47:224,10,0	0/1:8,1:9:16.34:38,0,16	0/1:10,1:20:8.83:9,0,18	1/1:22,0:20:12.17:68,12,0	0/1:22,9:33:64.58:141,0,65	1/1:17,7:25:8.47:106,8,0	1/1:10,0:10:17.84:125,18,0	1/1:18,0:18:9.14:33,9,0	0/1:8,6:14:6.53:37,0,7	1/1:6,14:20:2.99:23,3,0	0/1:7,13:21:5.81:29,0,6	0/0:14,0:33:26.80:0,27,75	0/0:10,0:18:16.37:0,16,55	1/1:18,0:18:8.91:62,9,0	1/1:16,9:25:20.01:234,20,0	1/1:6,0:9:1.35:22,1,0	1/1:1,3:17:11.50:59,12,0	1/1:20,2:24:32.13:182,32,0	1/1:7,2:26:11.39:56,11,0	0/1:17,1:18:21.09:85,0,21	1/1:29,1:27:26.27:148,26,0	0/1:21,1:22:33.03:107,0,33	1/1:5,0:6:6.89:27,7,0
chr10	67783470	.	T	TC	565.89	PASS	AB=0.950;AC=6;AF=0.107;AN=56;BaseQRankSum=2.098;DP=641;FS=0.000;HRun=1;HaplotypeScore=86.7689;InbreedingCoeff=0.2489;MQ=63.67;MQ0=9;MQRankSum=0.171;QD=5.83;ReadPosRankSum=2.731;VQSLOD=0.4695;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:37.29:0,37,351	0/0:10,0:10:27.41:0,27,235	0/0:76,0:19:33.55:0,34,361	0/0:47,0:19:1.60:0,2,148	0/0:20,0:20:49.51:0,50,457	0/0:26,0:26:45.30:0,45,343	0/0:9,0:9:20.94:0,21,161	0/0:19,0:18:33.43:0,33,254	0/0:21,0:19:16.14:0,16,81	0/0:34,0:34:68.05:0,68,684	0/0:27,0:27:55.93:0,56,433	0/0:10,0:10:16.17:0,16,85	0/0:5,13:18:13.11:0,13,83	0/0:14,0:14:21.04:0,21,168	0/0:21,0:21:16.45:0,16,112	0/0:21,0:21:17.74:0,18,138	0/0:32,0:32:38.27:0,38,477	0/0:20,0:20:47.81:0,48,384	0/0:18,0:18:36.50:0,36,280	0/0:24,0:24:33.50:0,33,246	0/0:10,0:10:22.93:0,23,167	1/1:14,0:14:23.36:171,23,0	0/1:21,3:24:10.24:243,0,10	0/1:22,0:22:24.81:65,0,25	0/0:20,0:20:47.37:0,47,394	0/1:28,3:28:99:206,0,107	0/0:24,0:23:51.37:0,51,415	0/1:6,0:6:6.44:6,0,67
chr10	67783637	.	ACTGTGAG	A	21827.96	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-0.549;DP=417;FS=8.545;HRun=0;HaplotypeScore=122.8735;InbreedingCoeff=0.9592;MQ=62.76;MQ0=0;MQRankSum=-8.861;QD=57.90;ReadPosRankSum=6.756;VQSLOD=4.1842;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,24:26:60.21:1495,60,0	1/1:1,9:10:18.06:449,18,0	0/0:15,0:15:39.13:0,39,1207	0/0:25,0:25:48.16:0,48,1592	1/1:2,7:8:21.07:523,21,0	1/1:2,13:15:39.13:953,39,0	1/1:1,11:12:33.11:823,33,0	1/1:12,19:31:57.20:1408,57,0	1/1:0,17:17:45.15:1122,45,0	1/1:4,18:22:57.18:1372,57,0	1/1:3,10:13:30.10:748,30,0	1/1:0,13:13:33.11:803,33,0	1/1:0,13:13:33.11:822,33,0	1/1:2,10:12:33.11:823,33,0	1/1:3,14:17:39.13:952,39,0	1/1:0,20:21:60.21:1477,60,0	1/1:7,3:10:15.05:374,15,0	1/1:0,6:6:18.06:449,18,0	1/1:0,7:7:21.07:524,21,0	1/1:0,16:16:45.15:1119,45,0	1/1:6,11:17:24.08:598,24,0	1/1:0,9:9:27.09:673,27,0	1/1:1,11:12:24.08:598,24,0	1/1:4,8:11:12.04:299,12,0	1/1:2,16:18:42.14:1028,42,0	1/1:1,12:11:33.11:823,33,0	1/1:1,17:17:42.14:1048,42,0	1/1:0,8:8:21.07:524,21,0
chr10	67784364	.	T	TG	725.94	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-6.056;DP=678;FS=4.383;HRun=4;HaplotypeScore=61.3568;InbreedingCoeff=0.9987;MQ=73.52;MQ0=0;MQRankSum=-2.689;QD=34.57;ReadPosRankSum=2.077;VQSLOD=4.3751;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:96.27:0,96,1089	0/0:11,0:11:33.09:0,33,371	0/0:14,0:14:42.12:0,42,472	0/0:14,0:13:28.48:0,28,281	0/0:29,0:29:87.25:0,87,987	0/0:21,0:21:60.17:0,60,681	0/0:23,0:23:57.14:0,57,636	0/0:32,0:32:78.22:0,78,885	1/1:0,21:21:60.20:821,60,0	0/0:25,0:25:75.18:0,75,826	0/0:21,0:21:60.11:0,60,657	0/0:23,0:23:69.18:0,69,772	0/0:21,0:21:60.16:0,60,671	0/0:25,0:25:63.18:0,63,714	0/0:37,0:37:99:0,102,1157	0/0:34,0:34:99:0,99,1123	0/0:29,0:29:84.24:0,84,952	0/0:30,0:30:90.22:0,90,1006	0/0:25,0:25:63.13:0,63,699	0/0:19,0:19:54.15:0,54,612	0/0:26,0:26:75.21:0,75,851	0/0:19,0:19:51.14:0,51,578	0/0:19,0:19:54.14:0,54,603	0/0:18,0:18:48.14:0,48,545	0/0:24,0:24:69.17:0,69,763	0/0:35,0:35:99:0,102,1141	0/0:34,0:33:96.27:0,96,1089	0/0:11,0:11:33.09:0,33,374
chr10	67784698	.	G	GT	8138.90	PASS	AB=0.558;AC=33;AF=0.589;AN=56;BaseQRankSum=-11.031;DP=610;FS=4.248;HRun=10;HaplotypeScore=63.9613;InbreedingCoeff=0.8928;MQ=76.77;MQ0=0;MQRankSum=-1.941;QD=20.76;ReadPosRankSum=-1.096;VQSLOD=5.5239;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:89.77:0,90,730	1/1:1,5:6:15.04:160,15,0	0/0:18,0:18:21.71:0,22,144	0/0:26,0:22:4.01:0,4,133	0/0:26,2:28:17.22:0,17,450	1/1:5,13:19:32.92:334,33,0	1/1:5,16:21:25.87:458,26,0	1/1:8,25:36:62.34:830,62,0	0/0:13,0:13:29.94:0,30,243	1/1:5,20:27:34.29:546,34,0	0/1:5,19:24:15.94:440,0,16	1/1:3,19:22:51.13:544,51,0	0/0:15,0:15:35.94:0,36,295	1/1:4,17:22:17.77:375,18,0	1/1:7,16:23:14.44:352,14,0	1/1:6,25:31:44.45:662,44,0	1/1:4,27:31:47.06:653,47,0	1/1:2,14:17:45.06:466,45,0	1/1:4,18:23:47.89:461,48,0	1/1:3,14:17:38.99:380,39,0	1/1:4,15:19:36.09:384,36,0	0/0:13,0:14:13.53:0,14,225	0/0:15,0:17:40.01:0,40,307	0/0:16,0:16:47.88:0,48,384	1/1:6,15:23:35.76:348,36,0	0/0:22,0:22:28.16:0,28,436	1/1:4,26:31:49.66:748,50,0	0/0:6,0:6:14.98:0,15,123
chr10	67785343	.	C	CTTTT	9424.51	PASS	AB=0.608;AC=30;AF=0.536;AN=56;BaseQRankSum=-6.590;DP=603;FS=3.181;HRun=9;HaplotypeScore=106.6223;InbreedingCoeff=0.7847;MQ=78.46;MQ0=2;MQRankSum=-4.502;QD=29.18;ReadPosRankSum=-5.757;VQSLOD=2.0158;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,99,1428	0/0:8,0:9:16.26:0,16,221	0/0:25,0:25:27.01:0,27,388	0/0:17,0:13:1.66:0,2,215	0/0:20,0:21:51.09:0,51,707	1/1:3,15:19:33.11:757,33,0	1/1:6,17:26:42.06:886,42,0	0/0:25,0:25:57.11:0,57,796	1/1:6,0:18:23.99:279,24,0	1/1:7,15:26:63.20:1196,63,0	1/1:6,16:23:42.06:743,42,0	1/1:1,16:16:12.04:286,12,0	0/1:9,0:23:17.37:17,0,145	1/1:2,11:13:15.05:324,15,0	1/1:5,16:22:30.10:689,30,0	1/1:1,10:15:30.10:597,30,0	0/0:40,0:38:93.19:0,93,1333	0/0:26,0:27:67.17:0,67,943	1/1:10,14:26:45.10:878,45,0	1/1:2,23:28:69.19:1305,69,0	1/1:1,5:9:12.01:223,12,0	0/1:6,0:19:20.21:20,0,21	0/0:2,0:20:17.42:0,17,45	0/0:1,0:21:21.74:0,22,57	1/1:3,16:20:27.09:612,27,0	0/0:4,0:26:2.33:0,2,47	1/1:4,14:18:30.10:613,30,0	0/0:0,0:11:13.71:0,14,36
chr10	67786046	.	CTTTAGTTTCTT	C	4155.43	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=10.089;DP=612;FS=14.299;HRun=0;HaplotypeScore=184.0482;InbreedingCoeff=0.9889;MQ=87.39;MQ0=0;MQRankSum=-10.248;QD=50.07;ReadPosRankSum=2.631;VQSLOD=2.5712;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:75.20:0,75,3784	0/0:12,0:12:36.12:0,36,1866	0/0:21,0:20:60.12:0,60,2638	0/0:27,0:27:74.88:0,75,2367	0/0:23,0:23:69.21:0,69,3222	0/0:25,0:25:75.24:0,75,3955	0/0:17,0:17:48.16:0,48,2146	0/0:29,0:29:81.26:0,81,3724	0/0:9,0:9:24.07:0,24,1064	0/0:28,0:28:84.28:0,84,4367	0/0:22,0:22:63.19:0,63,3178	0/0:28,0:28:84.27:0,84,4328	1/1:1,20:22:24.08:851,24,0	0/0:15,0:15:45.15:0,45,2156	0/0:23,0:23:69.24:0,69,3796	0/0:21,0:21:60.20:0,60,2901	0/0:32,0:32:93.28:0,93,4354	0/0:23,0:23:69.24:0,69,3673	0/0:22,0:22:60.18:0,60,2895	0/0:28,0:28:81.26:0,81,4278	0/0:27,0:27:78.23:0,78,3797	1/1:2,13:15:30.06:981,30,0	1/1:0,25:25:60.21:1963,60,0	1/1:0,21:21:12.04:361,12,0	0/0:18,0:18:48.16:0,48,2594	0/0:24,0:24:72.23:0,72,3421	0/0:18,0:18:54.19:0,54,2655	0/0:10,0:10:21.05:0,21,791
chr10	67786966	.	GACAC	G	1543.42	PASS	AB=0.810;AC=34;AF=0.708;AN=48;BaseQRankSum=3.361;DP=553;FS=1.663;HRun=0;HaplotypeScore=102.2478;InbreedingCoeff=0.4867;MQ=61.19;MQ0=24;MQRankSum=-2.299;QD=4.72;ReadPosRankSum=0.366;VQSLOD=2.1305;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:42:45.15:0,45,816	0/1:7,1:8:31.51:32,0,164	./.	./.	0/0:16,0:14:3.01:0,3,66	./.	1/1:15,5:20:3.01:46,3,0	0/0:21,0:17:9.03:0,9,159	0/0:22,0:22:5.46:0,5,118	1/1:10,7:17:18.27:176,18,0	1/1:6,0:7:6.01:54,6,0	1/1:11,7:17:3:46,3,0	1/1:9,0:14:6.01:56,6,0	1/1:7,3:14:9.02:121,9,0	1/1:10,7:18:6.02:93,6,0	1/1:5,5:10:12.03:167,12,0	0/0:24,0:23:33.11:0,33,753	0/0:21,0:24:41.61:0,42,801	1/1:9,3:10:8.99:92,9,0	1/1:20,0:19:2.97:20,3,0	0/1:24,13:37:15.39:168,0,15	1/1:12,0:21:5.81:56,6,0	1/1:9,1:11:0.79:1,1,0	1/1:15,0:25:6.01:56,6,0	1/1:13,2:15:3:29,3,0	1/1:16,0:28:20.82:181,21,0	1/1:15,13:29:21.06:306,21,0	./.
chr10	67791181	.	TA	T	11973.92	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=8.982;DP=650;FS=3.596;HRun=9;HaplotypeScore=63.0703;InbreedingCoeff=0.9763;MQ=74.55;MQ0=0;MQRankSum=-4.317;QD=22.72;ReadPosRankSum=2.548;VQSLOD=5.9054;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,33:37:93.04:851,93,0	1/1:2,10:12:23.96:211,24,0	0/0:16,0:15:32.28:0,32,328	0/0:12,0:12:17.75:0,18,187	1/1:4,23:27:68.95:620,69,0	1/1:2,13:15:36.02:329,36,0	1/1:2,20:22:51.03:467,51,0	1/1:8,26:34:77.97:697,78,0	1/1:3,20:23:60.02:549,60,0	1/1:4,34:38:80.46:903,80,0	1/1:3,21:24:25.54:487,26,0	1/1:2,23:25:60.02:549,60,0	0/0:26,0:26:63.16:0,63,705	1/1:1,12:13:30.01:274,30,0	1/1:2,21:23:57.03:522,57,0	1/1:5,21:26:63.02:577,63,0	1/1:2,14:16:39.02:357,39,0	1/1:1,16:17:48.03:439,48,0	1/1:1,19:20:57.01:515,57,0	1/1:4,28:32:71.87:639,72,0	1/1:0,19:19:57.03:522,57,0	0/0:26,0:26:69.18:0,69,778	0/0:25,0:25:60.17:0,60,683	0/0:18,0:18:48.13:0,48,543	1/1:1,29:30:83.99:759,84,0	1/1:5,37:42:99:995,111,0	1/1:0,27:27:71.96:659,72,0	1/1:2,3:5:6:55,6,0
chr10	67791683	.	TGCTGAGGGACAGACC	T	1588.70	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.621;DP=486;FS=2.503;HRun=0;HaplotypeScore=222.0874;InbreedingCoeff=0.9717;MQ=89.36;MQ0=0;MQRankSum=-5.371;QD=88.26;ReadPosRankSum=0.333;VQSLOD=3.1248;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:75.26:0,75,4762	0/0:8,0:8:21.07:0,21,1443	0/0:18,0:18:39.09:0,39,2063	0/0:21,0:21:35.87:0,36,1535	0/0:17,0:17:36.12:0,36,2213	0/0:15,0:15:39.13:0,39,2332	0/0:29,0:29:57.20:0,57,3714	0/0:11,0:11:21.07:0,21,1131	0/0:13,0:13:27.09:0,27,1851	0/0:15,0:15:30.10:0,30,1993	0/0:11,0:11:18.06:0,18,1265	0/0:18,0:18:45.15:0,45,2865	0/0:15,0:15:36.12:0,36,2531	0/0:11,0:11:30.10:0,30,2175	0/0:23,0:23:54.19:0,54,3713	0/0:13,0:13:24.08:0,24,1741	0/0:23,0:23:54.18:0,54,3287	0/0:27,0:27:66.23:0,66,4458	0/0:13,0:13:33.11:0,33,1859	0/0:22,0:22:57.17:0,57,3632	0/0:25,0:25:57.20:0,57,3721	0/0:18,0:18:42.14:0,42,2527	0/0:14,0:14:24.08:0,24,1462	0/0:23,0:23:57.20:0,57,3475	0/0:12,0:12:30.10:0,30,1966	1/1:1,10:11:30.10:1195,30,0	0/0:22,0:22:57.20:0,57,3926	1/1:2,5:7:12.04:510,12,0
chr10	67791744	.	C	CTTTTTT	9504.33	PASS	AB=1.000;AC=52;AF=0.929;AN=56;BaseQRankSum=-1.750;DP=525;FS=11.789;HRun=20;HaplotypeScore=168.0240;InbreedingCoeff=0.2709;MQ=59.12;MQ0=12;MQRankSum=-2.294;QD=19.36;ReadPosRankSum=-2.222;VQSLOD=-0.0108;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:28:39.58:513,40,0	1/1:8,0:8:14.58:147,15,0	0/0:34,0:14:1.60:0,2,14	0/1:30,0:13:5.36:5,0,26	1/1:34,0:33:46.71:605,47,0	1/1:17,0:17:22.53:310,23,0	1/1:24,0:20:33.21:554,33,0	1/1:23,0:18:19.60:216,20,0	1/1:14,0:13:4.33:211,4,0	1/1:16,0:16:35.08:437,35,0	1/1:17,0:17:40.99:584,41,0	1/1:16,0:15:32.05:449,32,0	1/1:19,0:18:37.23:517,37,0	1/1:12,0:12:21.54:317,22,0	1/1:19,0:19:35.95:442,36,0	1/1:17,0:17:30.76:406,31,0	0/1:10,0:8:16.41:48,0,16	1/1:15,0:14:7.94:58,8,0	1/1:24,0:24:36.89:516,37,0	1/1:25,0:25:46:584,46,0	1/1:12,0:10:12.45:109,12,0	1/1:4,4:9:12.42:181,12,0	1/1:10,0:10:12.01:118,12,0	1/1:6,0:10:3.48:52,3,0	1/1:28,0:28:40.95:745,41,0	1/1:25,0:25:52.43:680,52,0	1/1:23,0:23:39.07:571,39,0	1/1:5,0:5:9.02:129,9,0
chr10	67792307	.	CT	C	1468.06	PASS	AB=0.850;AC=11;AF=0.196;AN=56;BaseQRankSum=2.171;DP=545;FS=0.000;HRun=11;HaplotypeScore=62.0814;InbreedingCoeff=0.5943;MQ=67.06;MQ0=3;MQRankSum=-0.045;QD=10.34;ReadPosRankSum=0.413;VQSLOD=2.6650;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:13,1:43:57.43:0,57,475	1/1:1,8:9:20.94:168,21,0	0/1:12,1:9:9.17:9,0,51	0/0:10,0:6:9.87:0,10,53	0/0:6,0:19:3.17:0,3,163	0/0:20,1:22:35.37:0,35,566	0/0:28,0:28:68.58:0,69,671	1/1:11,21:32:18.70:461,19,0	0/0:17,0:17:35.90:0,36,355	0/0:31,0:31:32.35:0,32,522	0/0:11,1:12:8.43:0,8,288	0/0:19,0:19:44.94:0,45,454	0/0:14,0:14:21.29:0,21,307	0/0:18,0:18:42.08:0,42,431	0/0:12,1:13:5.43:0,5,262	0/0:28,0:28:72.11:0,72,737	1/1:7,28:34:59.38:525,59,0	1/1:0,22:21:47.94:393,48,0	0/0:24,2:27:11.01:0,11,494	0/0:13,0:13:27.05:0,27,279	0/1:10,4:15:65.19:65,0,174	0/0:9,0:9:23.99:0,24,235	0/0:16,1:17:20.43:0,20,406	0/0:15,0:15:42.10:0,42,445	0/1:12,3:15:15.74:16,0,247	0/0:23,0:23:54.13:0,54,570	0/0:17,0:16:40.31:0,40,401	0/0:8,0:8:21.05:0,21,223
chr10	67792647	.	A	AATATAT	4735.98	PASS	AC=38;AF=0.731;AN=52;BaseQRankSum=0.357;DP=261;FS=29.814;HRun=0;HaplotypeScore=54.7054;InbreedingCoeff=0.6482;MQ=73.98;MQ0=2;MQRankSum=-8.849;QD=37.29;ReadPosRankSum=-0.266;VQSLOD=2.2633;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,8:17:15.05:417,15,0	0/0:3,0:3:6.02:0,6,129	0/0:12,0:6:2.98:0,3,26	0/0:19,0:10:2.99:0,3,24	1/1:3,6:9:12.04:398,12,0	1/1:0,0:4:6.02:130,6,0	1/1:3,0:4:6.02:137,6,0	0/0:39,0:39:60.06:0,60,1078	0/0:3,0:6:5.67:0,6,69	1/1:4,3:8:12.04:339,12,0	1/1:1,2:4:9.03:281,9,0	1/1:1,3:4:9.03:275,9,0	1/1:2,1:3:3.01:100,3,0	1/1:1,3:5:15.05:478,15,0	1/1:8,0:8:9.03:213,9,0	1/1:1,4:5:6.02:177,6,0	0/0:24,0:24:72.20:0,72,1435	0/0:20,0:20:39.13:0,39,820	1/1:4,4:8:17.92:303,18,0	./.	1/1:4,2:6:3.01:78,3,0	1/1:1,1:2:3.01:100,3,0	1/1:4,2:6:3.01:100,3,0	./.	1/1:3,7:10:9.03:300,9,0	1/1:5,3:8:9:222,9,0	1/1:4,3:8:12.04:344,12,0	1/1:4,0:7:15.05:343,15,0
chr10	67793045	.	G	GCC	2550.98	PASS	AC=24;AF=0.444;AN=54;BaseQRankSum=-3.516;DP=224;FS=10.376;HRun=6;HaplotypeScore=43.6759;InbreedingCoeff=0.8610;MQ=72.27;MQ0=1;MQRankSum=-2.319;QD=28.99;ReadPosRankSum=-1.202;VQSLOD=1.5626;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:36.11:0,36,438	0/0:4,0:4:9.03:0,9,110	0/0:7,0:5:12.04:0,12,146	0/0:9,0:8:6.68:0,7,110	0/0:11,0:11:26.91:0,27,289	./.	1/1:4,5:10:21.07:352,21,0	0/0:12,0:12:33.10:0,33,402	0/0:11,0:11:23.43:0,23,264	1/1:2,2:4:12.03:178,12,0	1/1:2,4:7:12.04:192,12,0	1/1:2,8:10:29.93:414,30,0	0/0:15,0:15:38.68:0,39,432	1/1:0,3:3:6.02:101,6,0	1/1:4,7:11:27.09:440,27,0	1/1:4,5:10:17.95:270,18,0	0/0:10,0:10:27.08:0,27,324	0/0:7,0:7:21.05:0,21,243	1/1:4,5:9:15.05:242,15,0	1/1:0,3:3:6.02:90,6,0	1/1:2,8:10:15.05:253,15,0	0/0:6,0:6:12.03:0,12,146	0/0:5,0:5:15.05:0,15,183	0/0:17,0:17:24.22:0,24,316	1/1:4,0:4:6:51,6,0	0/0:2,0:2:6.02:0,6,73	1/1:3,4:7:12.02:175,12,0	0/0:5,0:5:3:0,3,37
chr10	67793504	.	GTTTT	G	9025.22	PASS	AB=0.583;AC=49;AF=0.875;AN=56;BaseQRankSum=-2.263;DP=421;FS=7.700;HRun=15;HaplotypeScore=81.6776;InbreedingCoeff=0.5150;MQ=68.07;MQ0=1;MQRankSum=-3.719;QD=23.75;ReadPosRankSum=3.378;VQSLOD=3.8130;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,20:24:54.03:731,54,0	1/1:1,4:5:8.98:123,9,0	0/0:27,0:14:21.21:0,21,310	0/0:14,0:7:5.97:0,6,83	1/1:5,8:14:16.13:208,16,0	1/1:2,18:20:26.01:628,26,0	1/1:4,10:14:23.94:327,24,0	1/1:6,21:28:61.29:819,61,0	1/1:3,10:13:30.03:408,30,0	1/1:3,9:12:26.99:368,27,0	1/1:7,5:13:14.95:204,15,0	1/1:0,9:10:24.06:309,24,0	0/1:3,1:18:16.67:50,0,17	1/1:1,8:9:21.06:286,21,0	1/1:3,14:20:45.81:582,46,0	1/1:2,12:14:26.73:368,27,0	1/1:2,21:23:48.14:654,48,0	1/1:2,10:12:24.03:327,24,0	1/1:3,8:12:22.19:273,22,0	1/1:2,11:13:23.98:327,24,0	1/1:1,11:12:21.03:286,21,0	1/1:1,1:7:4.90:13,5,0	0/1:3,0:11:11.97:13,0,12	0/1:2,0:5:2.73:3,0,19	1/1:3,13:18:28.23:371,28,0	1/1:5,18:23:51.09:695,51,0	1/1:7,12:19:29.84:409,30,0	1/1:5,6:11:17.94:245,18,0
chr10	67793678	.	AT	A	10387.82	PASS	AB=0.522;AC=25;AF=0.446;AN=56;BaseQRankSum=15.580;DP=591;FS=0.971;HRun=1;HaplotypeScore=100.6842;InbreedingCoeff=0.9286;MQ=74.99;MQ0=0;MQRankSum=-2.277;QD=38.91;ReadPosRankSum=2.488;VQSLOD=5.1352;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,147,2314	0/0:11,0:11:33.11:0,33,527	0/0:18,0:18:54.15:0,54,799	0/0:14,0:14:42.13:0,42,634	0/0:20,0:20:60.19:0,60,935	1/1:0,24:24:63.21:880,63,0	1/1:0,29:29:81.20:1108,81,0	0/0:26,0:26:78.26:0,78,1219	0/0:24,0:24:69.22:0,69,1079	1/1:0,10:10:30.10:420,30,0	1/1:0,14:14:42.14:587,42,0	1/1:0,29:29:81.27:1133,81,0	0/0:15,0:15:39.13:0,39,623	1/1:0,13:13:39.13:545,39,0	1/1:0,23:23:60.14:838,60,0	0/1:1,11:12:17.74:348,0,18	0/0:35,0:35:99:0,105,1652	0/0:22,0:22:63.18:0,63,980	1/1:0,23:23:69.23:964,69,0	1/1:0,17:17:48.16:671,48,0	1/1:0,30:30:84.28:1174,84,0	0/0:11,0:11:33.11:0,33,512	0/0:11,0:11:33.11:0,33,527	0/0:33,0:33:96.33:0,96,1530	1/1:0,20:20:57.19:797,57,0	0/0:25,0:25:69.24:0,69,1103	1/1:0,23:23:66.22:923,66,0	0/0:9,0:9:27.09:0,27,431
chr10	67794799	.	A	AT	6954.49	PASS	AB=0.993;AC=44;AF=0.786;AN=56;BaseQRankSum=-9.845;DP=543;FS=42.015;HRun=6;HaplotypeScore=72.5879;InbreedingCoeff=0.3672;MQ=78.07;MQ0=3;MQRankSum=0.589;QD=14.70;ReadPosRankSum=-2.075;VQSLOD=1.6889;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:39,0:39:68.34:136,0,68	0/1:4,0:4:10.46:13,0,10	0/0:40,0:24:28.94:0,29,241	0/1:20,0:13:12.21:12,0,73	0/1:15,0:15:14.02:14,0,17	1/1:2,19:21:27.09:339,27,0	1/1:5,25:30:43.37:520,43,0	1/1:24,0:24:22.69:189,23,0	1/1:19,0:18:10.88:143,11,0	1/1:4,19:23:51.07:552,51,0	1/1:5,7:12:15.01:170,15,0	1/1:2,12:15:20.83:219,21,0	1/1:1,13:14:27.09:338,27,0	1/1:0,17:17:33.10:404,33,0	1/1:5,15:20:27.08:331,27,0	1/1:3,17:20:33.08:414,33,0	0/0:22,0:22:16.70:0,17,58	0/1:14,0:14:0.69:75,0,1	1/1:5,10:15:30.03:316,30,0	1/1:7,7:14:30.54:342,31,0	1/1:4,13:16:12.04:151,12,0	1/1:1,22:23:54.09:642,54,0	1/1:2,7:9:12.03:141,12,0	1/1:1,22:23:48.15:601,48,0	1/1:6,14:20:32.56:408,33,0	0/1:22,1:23:30.07:100,0,30	1/1:5,17:22:30.93:383,31,0	0/0:8,0:8:5.40:0,5,14
chr10	67794805	.	T	TG	1380.98	PASS	AB=0.983;AC=22;AF=0.393;AN=56;BaseQRankSum=2.619;DP=533;FS=19.864;HRun=10;HaplotypeScore=91.6289;InbreedingCoeff=0.1158;MQ=77.41;MQ0=5;MQRankSum=-0.323;QD=4.44;ReadPosRankSum=4.436;VQSLOD=0.2610;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:83.64:0,84,659	0/0:4,0:4:8.99:0,9,74	0/0:44,0:24:13.50:0,13,126	0/0:19,0:12:0.57:0,1,53	0/0:9,0:9:23.97:0,24,197	0/1:20,0:20:16.16:70,0,16	0/1:31,1:32:39.60:163,0,40	0/0:27,0:27:39.05:0,39,290	0/0:17,0:16:26.93:0,27,218	0/1:28,0:28:54.70:55,0,125	0/1:11,0:11:20.49:39,0,20	0/1:14,0:14:8.03:44,0,8	1/1:15,0:15:7.96:124,8,0	1/1:18,0:18:8.90:97,9,0	0/1:19,1:20:9.16:100,0,9	1/1:18,0:18:11.28:104,11,0	0/0:17,0:17:50.94:0,51,418	0/0:15,0:16:36.97:0,37,260	0/1:11,0:11:7.05:29,0,7	0/1:11,0:11:2.41:66,0,2	0/1:15,0:14:24.94:34,0,25	1/1:23,0:23:6.19:146,6,0	0/1:10,1:11:3.45:63,0,3	1/1:23,0:23:30.98:221,31,0	0/1:19,1:20:26.04:103,0,26	0/0:21,0:22:42.60:0,43,372	0/1:21,0:21:22.05:101,0,22	0/0:8,0:8:20.51:0,21,144
chr10	67794988	.	T	TGTGTGT	1658.47	PASS	AB=0.709;AC=23;AF=0.426;AN=54;BaseQRankSum=2.780;DP=653;FS=3.328;HRun=0;HaplotypeScore=147.3986;InbreedingCoeff=0.7273;MQ=54.16;MQ0=8;MQRankSum=-3.928;QD=6.38;ReadPosRankSum=-3.519;VQSLOD=1.6147;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:23,14:39:28.37:232,0,28	./.	0/0:24,0:11:6:0,6,56	0/0:33,0:16:2.03:0,2,59	1/1:22,0:22:5.23:189,5,0	0/0:24,0:24:14.53:0,15,608	0/0:28,0:28:48.16:0,48,928	1/1:32,0:31:19.51:180,20,0	1/1:20,0:20:6.02:155,6,0	0/0:29,0:29:33.90:0,34,519	0/0:13,0:13:18.01:0,18,292	0/0:25,0:25:27.07:0,27,503	1/1:12,0:12:9.03:235,9,0	0/0:35,0:34:48.16:0,48,886	0/0:30,0:30:42.14:0,42,839	0/0:25,0:25:22.02:0,22,694	1/1:26,0:25:6.25:61,6,0	1/1:23,0:23:15.38:156,15,0	0/0:19,0:18:11.66:0,12,211	0/0:14,0:14:15:0,15,246	0/0:52,0:52:42.09:0,42,702	1/1:10,0:10:12.03:232,12,0	1/1:15,0:15:10.99:240,11,0	1/1:30,0:29:3.47:67,3,0	0/0:12,0:12:18.02:0,18,328	1/1:27,0:27:4.75:26,5,0	0/0:23,0:23:33.02:0,33,502	1/1:4,0:4:3.01:78,3,0
chr10	67795004	.	T	TGTGTGTGTGTGTGC	3095.71	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=5.832;DP=632;FS=7.593;HRun=0;HaplotypeScore=241.2946;InbreedingCoeff=-0.0765;MQ=57.30;MQ0=9;MQRankSum=-8.440;QD=12.58;ReadPosRankSum=-2.841;VQSLOD=0.8319;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:47,0:47:99:148,0,490	1/1:4,0:4:3.01:92,3,0	0/0:34,0:24:59.02:0,59,590	0/0:41,0:24:56.53:0,57,602	0/1:14,0:14:93.66:94,0,98	0/0:23,0:23:40.11:0,40,1466	0/0:27,0:27:75.13:0,75,2075	0/1:28,0:27:99:892,0,238	1/1:3,5:16:5.71:348,6,0	0/0:24,0:24:63.06:0,63,1355	0/0:12,0:12:29.67:0,30,580	0/0:24,0:24:53.30:0,53,1178	0/1:10,0:10:67.82:269,0,68	0/0:28,0:27:72.07:0,72,1905	0/0:34,0:34:87:0,87,1974	0/0:24,0:24:58.19:0,58,1613	0/1:23,0:22:33.15:33,0,112	0/1:24,0:24:99:451,0,232	0/0:18,0:17:38.97:0,39,675	0/0:14,0:14:35.94:0,36,654	0/0:51,0:51:83.73:0,84,2103	0/1:11,0:11:83.85:229,0,84	0/1:17,0:17:65.64:283,0,66	0/1:27,0:26:99:219,0,157	0/0:15,0:15:38.97:0,39,782	0/1:21,0:21:42.18:42,0,275	0/0:17,0:17:48:0,48,1079	0/1:4,0:4:29.95:154,0,30
chr10	67798480	.	GTT	G	4143.68	PASS	AB=0.600;AC=35;AF=0.625;AN=56;BaseQRankSum=-3.655;DP=464;FS=14.364;HRun=13;HaplotypeScore=84.2041;InbreedingCoeff=0.9038;MQ=70.30;MQ0=3;MQRankSum=-1.012;QD=15.76;ReadPosRankSum=5.731;VQSLOD=0.8887;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:18:33.05:0,33,340	0/0:0,0:8:14.97:0,15,51	0/0:22,0:11:14.78:0,15,118	0/0:19,0:12:13.53:0,14,87	0/0:9,0:17:47.43:0,47,422	1/1:2,16:18:24.02:233,24,0	1/1:4,14:19:13.50:324,13,0	0/1:9,2:27:16.80:17,0,84	0/0:17,0:17:32.90:0,33,262	1/1:2,11:14:35.76:332,36,0	1/1:3,8:11:17.98:174,18,0	1/1:1,8:10:11.95:166,12,0	1/1:1,0:10:24.63:106,25,0	1/1:1,10:11:30.05:291,30,0	1/1:4,11:16:35.32:331,35,0	1/1:0,10:10:27.04:262,27,0	0/0:5,0:28:47.29:0,47,163	0/0:3,1:23:16.35:0,16,117	1/1:4,10:15:20.95:253,21,0	1/1:5,13:18:42.04:403,42,0	1/1:3,12:15:27.02:262,27,0	1/1:0,0:9:22.43:96,22,0	1/1:1,0:11:24.69:107,25,0	1/1:3,0:15:27.85:120,28,0	1/1:4,15:18:29.99:291,30,0	0/0:4,1:21:24.79:0,25,434	1/1:1,14:14:39.06:378,39,0	0/0:7,0:28:50.87:0,51,495
chr10	67798484	.	T	TG	586.61	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=3.770;DP=457;FS=11.720;HRun=0;HaplotypeScore=87.3136;InbreedingCoeff=0.8502;MQ=71.21;MQ0=3;MQRankSum=-0.394;QD=9.62;ReadPosRankSum=2.830;VQSLOD=3.2793;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:5.38:0,5,118	0/0:9,0:9:23.93:0,24,190	0/0:20,0:9:3.05:0,3,100	0/0:17,0:11:1.91:0,2,39	0/0:16,0:16:4.02:0,4,148	0/0:17,0:17:26.87:0,27,203	0/0:16,0:16:41.75:0,42,310	0/0:27,0:27:77.80:0,78,638	1/1:2,15:17:27.76:360,28,0	0/0:16,0:16:41.78:0,42,315	0/0:10,0:10:26.75:0,27,199	0/0:9,0:9:20.81:0,21,150	1/1:9,0:9:22.15:87,22,0	0/0:11,0:11:29.75:0,30,214	0/0:17,0:17:47.58:0,48,356	0/0:10,0:10:26.85:0,27,198	0/0:29,0:29:68.87:0,69,558	0/0:21,0:22:59.70:0,60,463	0/0:15,0:15:41.58:0,42,303	0/0:18,0:18:50.53:0,51,370	0/0:14,0:14:32.85:0,33,251	1/1:9,0:9:22.32:91,22,0	1/1:11,0:11:22.88:87,23,0	1/1:14,1:15:29.70:133,30,0	0/0:19,0:18:41.76:0,42,322	0/0:21,0:21:26.43:0,26,237	0/0:15,0:14:38.62:0,39,274	0/0:31,0:31:10.66:0,11,240
chr10	67798801	.	TTGTA	T	3033.66	PASS	AB=0.821;AC=22;AF=0.458;AN=48;BaseQRankSum=5.806;DP=731;FS=3.525;HRun=0;HaplotypeScore=123.7645;InbreedingCoeff=0.7886;MQ=70.19;MQ0=3;MQRankSum=-0.190;QD=9.63;ReadPosRankSum=2.099;VQSLOD=2.8061;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:42,15:57:33.09:481,33,0	1/1:3,2:5:6.02:91,6,0	./.	./.	1/1:11,13:23:27.05:382,27,0	0/0:23,0:31:24.07:0,24,392	0/0:43,0:43:12.02:0,12,191	./.	1/1:13,0:19:9.01:84,9,0	0/0:16,0:23:27.08:0,27,471	0/0:17,0:16:21:0,21,335	0/0:28,0:28:42.13:0,42,883	1/1:15,7:22:18.05:254,18,0	0/0:28,0:28:30.10:0,30,693	1/1:19,12:31:21.07:317,21,0	0/0:15,0:25:25.33:0,25,435	1/1:12,9:21:27.09:408,27,0	1/1:22,8:31:18.02:272,18,0	0/1:26,1:26:33.26:33,0,181	0/0:13,0:13:21.06:0,21,441	1/1:32,12:44:21.07:317,21,0	1/1:6,6:13:15:209,15,0	0/0:9,0:9:18.06:0,18,412	0/0:39,0:39:37.93:0,38,790	0/0:12,0:12:6.02:0,6,119	0/1:11,8:21:6.82:380,0,7	0/0:34,0:34:45.06:0,45,788	./.
chr10	67799472	.	T	TA	2402.95	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-7.099;DP=521;FS=5.586;HRun=1;HaplotypeScore=50.7555;InbreedingCoeff=0.9973;MQ=71.90;MQ0=0;MQRankSum=0.195;QD=35.86;ReadPosRankSum=1.446;VQSLOD=3.5511;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,123,1533	0/0:7,0:7:21.06:0,21,259	0/0:12,0:12:24.67:0,25,252	0/0:13,0:13:32.60:0,33,357	0/0:19,0:19:57.15:0,57,698	0/0:18,0:18:54.13:0,54,655	0/0:20,0:20:54.09:0,54,615	0/0:25,0:25:72.20:0,72,895	0/0:18,0:18:51.16:0,51,648	0/0:19,0:19:54.15:0,54,664	0/0:11,0:11:33.09:0,33,402	0/0:33,0:33:99:0,99,1226	1/1:0,12:12:36.12:518,36,0	0/0:23,0:23:66.18:0,66,814	0/0:18,0:18:51.14:0,51,631	0/0:16,0:16:48.15:0,48,608	0/0:20,0:20:60.09:0,60,687	0/0:21,0:21:60.19:0,60,763	0/0:28,0:28:72.15:0,72,871	0/0:15,0:15:39.13:0,39,504	0/0:22,0:22:66.18:0,66,813	1/1:1,17:18:50.96:658,51,0	1/1:0,14:15:42.05:568,42,0	1/1:1,21:22:57.19:820,57,0	0/0:15,0:15:42.14:0,42,544	0/0:19,0:19:54.17:0,54,688	0/0:11,0:10:27.08:0,27,337	0/0:8,0:8:24.08:0,24,310
chr10	67799931	.	G	GTCTCTC	3070.90	PASS	AB=1.000;AC=40;AF=0.800;AN=50;BaseQRankSum=-1.971;DP=601;FS=5.005;HRun=0;HaplotypeScore=155.8112;InbreedingCoeff=0.4289;MQ=67.18;MQ0=16;MQRankSum=-1.030;QD=7.09;ReadPosRankSum=-1.166;VQSLOD=2.4573;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:28:10.13:194,10,0	./.	./.	./.	0/1:14,0:14:0:0,0,0	1/1:19,0:19:3.47:26,3,0	1/1:18,0:17:3.79:75,4,0	1/1:37,0:37:8.01:69,8,0	1/1:7,0:17:8.20:75,8,0	1/1:30,3:34:26.53:485,27,0	0/0:15,1:15:0.94:0,1,2	1/1:12,0:12:3.01:61,3,0	1/1:24,0:23:26.75:442,27,0	1/1:19,0:18:11.88:194,12,0	1/1:22,0:22:3.01:64,3,0	1/1:14,0:14:3.01:89,3,0	1/1:27,0:27:21.13:342,21,0	1/1:12,0:12:18.53:318,19,0	1/1:21,0:20:21.43:367,21,0	1/1:12,0:11:2.99:23,3,0	1/1:29,0:30:5.89:130,6,0	0/1:22,0:22:0:0,0,0	0/0:15,0:14:0:0,0,0	1/1:15,0:16:5.76:141,6,0	1/1:18,0:18:2.94:18,3,0	0/0:11,0:12:15.05:0,15,263	1/1:16,0:15:3.48:72,3,0	0/0:11,0:16:6.02:0,6,84
chr10	67799973	.	C	CTG	836.42	PASS	AB=0.973;AC=16;AF=0.286;AN=56;BaseQRankSum=0.685;DP=494;FS=13.954;HRun=0;HaplotypeScore=120.8367;InbreedingCoeff=0.0670;MQ=46.48;MQ0=22;MQRankSum=3.083;QD=3.11;ReadPosRankSum=1.452;VQSLOD=1.8841;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:26:23.85:0,24,148	0/0:5,0:5:5.94:0,6,41	0/0:15,0:6:5.14:0,5,85	0/0:11,0:4:8.93:0,9,83	0/0:10,0:10:9.28:0,9,56	0/1:15,0:15:0.47:0,0,19	0/1:20,0:19:26.09:117,0,26	0/0:21,0:17:41.15:0,41,251	0/1:21,0:20:18.91:19,0,103	0/1:29,0:29:99:185,0,207	1/1:11,0:9:5.82:46,6,0	1/1:14,0:14:0.32:101,0,0	0/0:24,0:22:38.90:0,39,232	0/1:24,0:23:19.77:116,0,20	0/1:18,0:18:1.53:2,0,9	0/1:17,0:17:0.61:1,0,14	0/0:27,0:27:41.65:0,42,282	0/0:17,0:17:31.82:0,32,221	0/1:23,0:20:62.61:63,0,179	0/1:12,0:12:0.52:1,0,1	0/1:29,0:27:1.39:193,0,1	0/0:13,0:13:22.33:0,22,123	0/0:8,0:8:11.77:0,12,74	0/0:16,0:16:12.21:0,12,72	0/1:12,11:23:11.37:37,0,11	0/0:20,0:20:56.90:0,57,429	0/1:13,0:12:2.04:99,0,2	0/0:11,0:11:17.45:0,17,128
chr10	67799975	.	C	CTGTG	2288.82	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=-2.546;DP=493;FS=6.728;HRun=0;HaplotypeScore=132.2900;InbreedingCoeff=0.4672;MQ=46.88;MQ0=21;MQRankSum=3.642;QD=10.70;ReadPosRankSum=1.477;VQSLOD=2.5410;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:24:27.02:0,27,304	0/0:5,0:5:6.02:0,6,77	0/0:17,0:8:14.99:0,15,193	0/0:12,0:5:12:0,12,161	0/0:10,0:10:9.91:0,10,118	0/0:16,0:16:3.46:0,3,25	1/1:20,0:19:15.60:333,16,0	0/0:21,0:17:38.48:0,38,289	0/0:21,0:20:23.82:0,24,299	0/1:29,0:29:99:519,0,257	1/1:11,0:9:5.99:94,6,0	1/1:14,0:14:16.60:245,17,0	0/0:24,0:22:40.85:0,41,482	0/1:24,0:23:17.98:260,0,18	0/0:19,0:19:2.99:0,3,24	0/1:17,0:17:9.59:16,0,10	0/0:25,0:25:40.93:0,41,536	0/0:17,0:17:35.67:0,36,387	0/1:22,0:20:99:173,0,191	1/1:4,8:12:2.29:70,2,0	1/1:28,1:27:12.90:462,13,0	0/0:13,0:13:24.04:0,24,296	0/0:8,0:8:12.04:0,12,173	0/0:16,0:16:10.62:0,11,177	1/1:23,0:23:4.83:73,5,0	0/0:21,0:21:56.15:0,56,700	0/1:13,0:12:0.10:220,0,0	0/0:9,0:9:16.87:0,17,238
chr10	67799977	.	CTGTGTGTG	C	3872.23	PASS	AB=0.876;AC=15;AF=0.268;AN=56;BaseQRankSum=-3.601;DP=518;FS=30.747;HRun=0;HaplotypeScore=148.4621;InbreedingCoeff=0.5039;MQ=47.07;MQ0=19;MQRankSum=0.063;QD=23.76;ReadPosRankSum=3.549;VQSLOD=1.6186;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:24:3.42:356,0,3	1/1:4,1:5:5.91:89,6,0	0/0:19,0:8:21.96:0,22,705	0/0:14,0:6:18.06:0,18,631	1/1:7,0:10:9.94:139,10,0	0/0:10,0:18:5.87:0,6,35	0/0:22,0:21:30.10:0,30,1013	1/1:13,8:17:23.97:546,24,0	0/0:20,0:20:24.51:0,25,450	0/0:31,0:32:81.14:0,81,2430	0/0:10,0:9:6.49:0,6,211	0/0:15,0:15:21.07:0,21,621	0/1:20,3:22:99:622,0,184	0/0:25,0:24:30:0,30,906	0/0:10,0:20:6.02:0,6,134	0/0:5,0:25:2.66:0,3,59	0/1:21,4:25:80.65:744,0,81	0/1:15,1:17:98.67:354,0,99	0/0:16,0:21:42:0,42,1083	0/0:13,0:13:15.23:0,15,142	0/0:29,0:28:42.13:0,42,1330	1/1:11,1:12:21.03:467,21,0	1/1:7,1:8:11.99:255,12,0	0/1:13,2:16:1.48:300,0,1	0/0:22,0:22:9.03:0,9,305	0/0:22,0:22:57.19:0,57,1666	0/0:17,0:16:27.09:0,27,755	0/0:9,0:9:17.80:0,18,496
chr10	67800526	.	G	GGA	9970.67	PASS	AB=1.000;AC=30;AF=0.536;AN=56;BaseQRankSum=-3.002;DP=574;FS=6.403;HRun=0;HaplotypeScore=127.2454;InbreedingCoeff=0.3520;MQ=84.56;MQ0=0;MQRankSum=-2.209;QD=24.80;ReadPosRankSum=1.989;VQSLOD=5.9091;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,38:42:84.29:1642,84,0	1/1:1,6:10:15.05:288,15,0	0/0:23,0:23:46.38:0,46,682	0/0:23,0:24:38.71:0,39,640	1/1:1,12:14:36.12:676,36,0	0/1:19,0:19:1.78:2,0,14	0/1:23,0:23:14.68:43,0,15	1/1:0,34:34:99:1797,102,0	1/1:1,20:21:58.08:1118,58,0	0/1:12,0:12:20.46:20,0,50	0/1:8,0:8:34.05:39,0,34	0/0:22,0:22:31.59:0,32,227	0/0:27,0:27:77.56:0,78,1061	0/0:19,0:19:12.52:0,13,64	0/1:23,0:23:14.75:47,0,15	0/1:23,0:23:11.80:55,0,12	1/1:0,24:25:63.22:1236,63,0	1/1:1,20:23:60.21:1157,60,0	1/1:14,0:14:10.51:68,11,0	0/1:13,0:13:5.09:68,0,5	0/1:23,0:23:11.95:71,0,12	0/0:9,0:9:24.96:0,25,334	0/0:12,0:12:36.10:0,36,493	0/0:36,0:36:99:0,108,1363	0/1:20,0:20:4.45:4,0,23	1/1:0,11:11:30.08:553,30,0	0/1:26,0:26:16.84:31,0,17	1/1:0,17:18:54.19:1054,54,0
chr10	67800678	.	C	CT	1898.47	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-7.488;DP=606;FS=2.653;HRun=1;HaplotypeScore=56.8533;InbreedingCoeff=0.9978;MQ=77.44;MQ0=0;MQRankSum=-4.257;QD=37.22;ReadPosRankSum=2.021;VQSLOD=4.0757;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,28:29:78.20:1121,78,0	0/0:7,0:7:21.07:0,21,273	0/0:28,0:26:53.61:0,54,795	0/0:18,0:18:45.13:0,45,561	1/1:0,22:22:60.20:899,60,0	0/0:25,0:25:69.22:0,69,896	0/0:22,0:22:63.20:0,63,818	0/0:26,0:26:72.22:0,72,922	0/0:15,0:15:39.13:0,39,506	0/0:17,0:17:47.71:0,48,612	0/0:29,0:29:75.23:0,75,959	0/0:24,0:24:69.20:0,69,880	0/0:23,0:23:69.22:0,69,896	0/0:15,0:15:42.14:0,42,545	0/0:21,0:21:63.20:0,63,818	0/0:17,0:17:48.14:0,48,609	0/0:30,0:30:87.28:0,87,1129	0/0:21,0:21:60.20:0,60,779	0/0:19,0:19:57.17:0,57,726	0/0:21,0:21:57.18:0,57,738	0/0:22,0:22:60.19:0,60,779	0/0:19,0:19:51.17:0,51,662	0/0:18,0:18:51.17:0,51,662	0/0:34,0:34:99:0,99,1267	0/0:17,0:17:45.12:0,45,566	0/0:16,0:16:48.16:0,48,623	0/0:29,0:29:87.28:0,87,1129	0/0:22,0:22:66.21:0,66,856
chr10	67800813	.	GAC	G	7766.98	PASS	AB=0.500;AC=51;AF=0.911;AN=56;BaseQRankSum=-3.474;DP=511;FS=12.750;HRun=0;HaplotypeScore=64.0515;InbreedingCoeff=0.7649;MQ=77.46;MQ0=17;MQRankSum=-6.807;QD=19.23;ReadPosRankSum=4.048;VQSLOD=4.0686;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:19:53.88:437,54,0	1/1:9,0:9:5.76:156,6,0	0/0:43,0:25:61.38:0,61,595	0/0:64,0:24:35.59:0,36,358	1/1:14,0:14:41.94:346,42,0	1/1:14,0:14:35.91:292,36,0	1/1:15,0:15:3:27,3,0	1/1:33,0:32:81.54:758,82,0	1/1:11,0:11:26.95:222,27,0	1/1:13,0:13:36.01:332,36,0	1/1:16,0:16:41.95:349,42,0	1/1:15,0:15:35.99:324,36,0	1/1:13,0:12:26.83:210,27,0	1/1:11,0:11:26.92:225,27,0	1/1:13,0:14:35.97:304,36,0	1/1:0,10:10:3.01:44,3,0	1/1:26,0:25:22.50:404,22,0	1/1:15,0:15:41.90:341,42,0	1/1:9,0:8:18:163,18,0	1/1:14,0:14:38.97:328,39,0	1/1:17,0:15:35.86:283,36,0	0/1:0,7:7:0:0,0,0	1/1:16,0:16:41.91:343,42,0	1/1:19,1:19:29.38:346,29,0	1/1:13,0:12:32.96:276,33,0	1/1:17,0:16:45.85:404,46,0	1/1:19,0:18:52.50:395,53,0	1/1:23,0:23:57.30:456,57,0
chr10	67800814	.	ACACTCT	A	6942.55	PASS	AB=1.000;AC=40;AF=0.714;AN=56;BaseQRankSum=-6.910;DP=509;FS=21.737;HRun=0;HaplotypeScore=96.8519;InbreedingCoeff=0.1357;MQ=76.67;MQ0=18;MQRankSum=-5.561;QD=17.67;ReadPosRankSum=2.731;VQSLOD=2.7023;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:19:53.88:437,54,0	0/1:9,0:9:24.96:151,0,25	0/0:43,0:25:61.60:0,62,600	0/0:63,0:23:33.65:0,34,354	1/1:15,0:15:19.90:321,20,0	1/1:13,0:13:35.91:292,36,0	1/1:0,14:14:3.01:72,3,0	1/1:32,0:31:81.54:757,82,0	1/1:9,0:9:26.95:222,27,0	1/1:13,0:13:36.48:333,36,0	1/1:16,0:16:41.95:349,42,0	0/1:16,0:16:51.04:216,0,51	0/1:12,0:11:32.45:134,0,32	0/1:11,0:11:67.29:117,0,67	1/1:14,0:14:11.07:254,11,0	0/0:10,0:10:3:0,3,26	0/1:27,0:26:99:341,0,204	0/1:15,0:15:22.38:222,0,22	1/1:9,0:8:18:163,18,0	1/1:14,0:14:38.97:328,39,0	1/1:17,0:15:35.86:283,36,0	0/1:7,0:7:0:0,0,0	1/1:16,0:16:24.12:300,24,0	0/1:20,0:19:94.22:244,0,94	1/1:13,0:12:32.96:276,33,0	0/1:18,0:17:3.73:337,0,4	1/1:20,0:18:50.32:399,50,0	0/1:24,0:23:65.18:392,0,65
chr10	67800970	.	CTTTG	C	12634.02	PASS	AB=0.915;AC=47;AF=0.839;AN=56;BaseQRankSum=-3.117;DP=521;FS=3.584;HRun=0;HaplotypeScore=130.8999;InbreedingCoeff=0.3776;MQ=71.87;MQ0=1;MQRankSum=1.354;QD=26.94;ReadPosRankSum=9.255;VQSLOD=3.6430;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:36,1:37:8.95:719,0,9	1/1:5,1:6:12.04:203,12,0	0/0:24,0:19:29.24:0,29,733	0/0:27,0:21:24.38:0,24,675	0/1:17,2:19:7.98:543,0,8	1/1:20,2:21:23.66:610,24,0	1/1:19,3:20:25.11:620,25,0	1/1:6,14:20:42.14:685,42,0	1/1:13,2:15:30.06:446,30,0	1/1:4,11:15:27.04:503,27,0	0/1:15,2:17:8.09:370,0,8	1/1:14,2:16:22.43:470,22,0	1/1:9,3:12:24.08:380,24,0	1/1:12,2:14:22.31:304,22,0	0/1:16,2:18:9.50:441,0,10	1/1:12,1:13:8.14:283,8,0	1/1:13,3:16:36.12:605,36,0	1/1:15,2:17:36.12:603,36,0	1/1:8,1:9:9.03:130,9,0	1/1:13,2:15:27.11:275,27,0	1/1:22,2:24:48.03:672,48,0	1/1:17,2:19:25.95:451,26,0	1/1:6,2:8:16.87:295,17,0	1/1:20,3:23:42.13:649,42,0	1/1:20,6:26:57.69:690,58,0	1/1:22,4:26:14.57:610,15,0	0/1:25,3:28:1.09:588,0,1	1/1:9,3:12:33.09:489,33,0
chr10	67800985	.	TG	T	2668.12	PASS	AB=1.000;AC=44;AF=0.786;AN=56;BaseQRankSum=1.831;DP=478;FS=1.958;HRun=1;HaplotypeScore=137.9334;InbreedingCoeff=0.1217;MQ=60.62;MQ0=6;MQRankSum=3.523;QD=6.26;ReadPosRankSum=6.447;VQSLOD=0.7365;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:36,0:36:85.26:160,0,85	0/1:6,0:6:17.61:18,0,30	0/0:27,0:15:45.11:0,45,590	0/0:25,0:16:41.71:0,42,595	1/1:18,0:18:19.38:100,19,0	1/1:19,0:18:30.02:156,30,0	1/1:17,0:15:14.22:118,14,0	0/1:20,0:20:91.84:92,0,179	1/1:15,0:15:7.78:80,8,0	1/1:18,0:18:6.73:91,7,0	0/1:16,0:16:24.77:60,0,25	1/1:15,0:15:36.73:171,37,0	1/1:11,0:11:6.59:79,7,0	1/1:14,0:14:20.35:126,20,0	1/1:16,0:16:9.69:166,10,0	1/1:8,0:8:16.80:69,17,0	0/1:14,0:14:44.65:86,0,45	0/1:18,0:18:85.71:89,0,86	0/1:8,0:6:17.37:17,0,107	1/1:15,0:15:30.35:128,30,0	1/1:18,1:19:18.81:113,19,0	1/1:17,1:18:11.53:85,12,0	1/1:8,0:8:7.30:54,7,0	1/1:20,0:20:26.53:131,27,0	1/1:21,2:23:40.38:262,40,0	1/1:20,0:20:35.80:163,36,0	0/1:23,0:23:4.38:101,0,4	1/1:10,1:11:18.73:119,19,0
chr10	67801035	.	C	CTTTCTTTTT	9342.73	PASS	AB=0.856;AC=47;AF=0.839;AN=56;BaseQRankSum=2.397;DP=534;FS=3.439;HRun=0;HaplotypeScore=156.5260;InbreedingCoeff=0.0174;MQ=54.03;MQ0=4;MQRankSum=2.292;QD=17.80;ReadPosRankSum=-0.185;VQSLOD=4.2122;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:16,0:39:17.52:281,0,18	0/1:5,0:6:19.15:46,0,19	0/1:15,0:7:13.93:14,0,60	0/0:9,0:3:9.02:0,9,111	1/1:5,0:15:12.90:244,13,0	1/1:23,0:23:42.65:687,43,0	1/1:20,0:16:28.09:392,28,0	0/1:21,0:21:9.85:157,0,10	1/1:5,11:24:14.16:297,14,0	1/1:8,0:10:26.48:433,26,0	1/1:6,0:27:56.73:708,57,0	1/1:16,0:17:44.19:590,44,0	1/1:2,0:16:7.12:126,7,0	1/1:13,0:21:27.68:509,28,0	1/1:9,0:14:21.48:294,21,0	0/1:10,0:10:8.44:304,0,8	1/1:26,0:26:1.45:328,1,0	0/1:8,0:23:24.67:25,0,50	1/1:22,0:19:15.58:537,16,0	0/1:22,0:23:5.16:533,0,5	1/1:10,0:11:3.61:123,4,0	1/1:3,0:21:24.19:275,24,0	1/1:2,0:13:9.33:162,9,0	1/1:2,0:24:7.27:99,7,0	1/1:23,0:24:38.99:505,39,0	1/1:31,0:30:79.66:928,80,0	1/1:8,0:16:29.13:519,29,0	1/1:5,0:5:9.90:226,10,0
chr10	67801658	.	TCA	T	3482.60	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=8.531;DP=715;FS=1.914;HRun=0;HaplotypeScore=121.5100;InbreedingCoeff=0.9978;MQ=86.10;MQ0=1;MQRankSum=-2.416;QD=34.83;ReadPosRankSum=2.395;VQSLOD=5.6201;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,144,2538	0/0:9,0:9:24.08:0,24,425	0/0:25,0:25:63.21:0,63,1057	0/0:23,0:23:31.76:0,32,910	0/0:18,0:17:42.14:0,42,740	0/0:18,0:18:51.17:0,51,900	0/0:38,0:38:99:0,108,1842	0/0:20,0:20:57.19:0,57,986	0/0:24,0:24:69.24:0,69,1223	0/0:25,0:25:66.23:0,66,1168	0/0:14,0:14:36.12:0,36,628	0/0:27,0:27:78.27:0,78,1378	1/1:3,27:30:75.25:1031,75,0	0/0:24,0:24:72.25:0,72,1256	0/0:33,0:33:93.32:0,93,1648	0/0:22,0:22:54.19:0,54,958	0/0:48,0:48:99:0,138,2369	0/0:38,0:38:99:0,111,1946	0/0:23,0:23:69.24:0,69,1212	0/0:14,0:14:36.12:0,36,639	0/0:62,0:62:99:0,181,3187	1/1:2,10:12:27.05:349,27,0	1/1:0,14:13:36.12:495,36,0	1/1:2,42:44:99:1608,117,0	0/0:14,0:14:36.12:0,36,624	0/0:21,0:21:63.22:0,63,1118	0/0:17,0:17:51.14:0,51,847	0/0:7,0:7:21.05:0,21,335
chr10	67802980	.	CG	C	15963.54	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=1.701;DP=644;FS=0.000;HRun=7;HaplotypeScore=63.7415;InbreedingCoeff=0.9910;MQ=87.12;MQ0=0;MQRankSum=-10.908;QD=26.83;ReadPosRankSum=7.160;VQSLOD=4.3988;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,43:46:99:1193,117,0	1/1:0,13:13:36.08:367,36,0	0/0:29,0:29:72.16:0,72,860	0/0:20,0:20:57.18:0,57,696	1/1:2,22:24:63.14:643,63,0	1/1:0,31:31:78.18:796,78,0	1/1:3,26:29:72.16:734,72,0	1/1:3,27:30:75.16:765,75,0	1/1:1,19:20:57.13:581,57,0	1/1:5,22:27:63.14:642,63,0	1/1:1,27:28:81.18:826,81,0	1/1:1,25:26:72.16:734,72,0	1/1:0,7:7:18.04:182,18,0	1/1:1,23:24:63.14:643,63,0	1/1:4,30:34:90.20:918,90,0	1/1:0,20:20:57.13:581,57,0	1/1:3,34:37:93.21:949,93,0	1/1:2,15:17:45.10:459,45,0	1/1:3,16:19:48.10:489,48,0	1/1:2,17:19:54.12:550,54,0	1/1:0,27:27:81.18:826,81,0	1/1:1,7:8:21.05:214,21,0	1/1:0,10:10:27.06:274,27,0	1/1:1,9:10:24.05:245,24,0	1/1:4,15:19:33.07:336,33,0	1/1:1,30:31:90.20:917,90,0	1/1:3,28:31:84.19:855,84,0	1/1:0,8:8:24.05:245,24,0
chr10	67803669	.	CTGG	C	31.32	PASS	AB=0.819;AC=2;AF=0.036;AN=56;BaseQRankSum=3.407;DP=361;FS=0.000;HRun=0;HaplotypeScore=54.3388;InbreedingCoeff=-0.0418;MQ=80.22;MQ0=0;MQRankSum=-3.302;QD=1.25;ReadPosRankSum=-1.207;VQSLOD=1.0617;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:84.29:0,84,2044	0/0:5,0:5:15.05:0,15,344	0/1:6,3:7:66.26:66,0,231	0/1:14,2:16:53.83:54,0,393	0/0:13,0:13:39.13:0,39,944	0/0:7,0:7:21.07:0,21,517	0/0:29,0:29:87.26:0,87,2074	0/0:17,0:17:51.11:0,51,1110	0/0:11,0:11:33.11:0,33,800	0/0:8,0:8:21.07:0,21,517	0/0:8,0:8:24.08:0,24,570	0/0:9,0:9:27.09:0,27,665	0/0:4,0:4:12.04:0,12,296	0/0:11,0:11:33.11:0,33,805	0/0:6,0:6:18.06:0,18,444	0/0:12,0:12:36.12:0,36,887	0/0:23,0:23:69.24:0,69,1658	0/0:9,0:9:27.09:0,27,661	0/0:12,0:12:36.12:0,36,864	0/0:8,0:8:24.08:0,24,565	0/0:24,0:24:69.24:0,69,1700	0/0:3,0:3:9.03:0,9,222	0/0:13,0:13:39.13:0,39,961	0/0:24,0:24:69.24:0,69,1695	0/0:10,0:10:30.10:0,30,737	0/0:19,0:19:57.20:0,57,1385	0/0:12,0:11:36.12:0,36,852	0/0:11,0:11:30.10:0,30,734
chr10	67804417	.	GCC	G	13486.34	PASS	AC=50;AF=0.893;AN=56;BaseQRankSum=-6.426;DP=624;FS=0.637;HRun=10;HaplotypeScore=131.7503;InbreedingCoeff=0.9949;MQ=77.37;MQ0=2;MQRankSum=-4.685;QD=23.91;ReadPosRankSum=4.448;VQSLOD=3.6994;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,29:37:84.20:936,84,0	1/1:1,6:7:18.04:201,18,0	0/0:25,0:23:44.43:0,44,542	0/0:22,0:18:23.87:0,24,263	1/1:1,20:21:51.12:568,51,0	1/1:1,24:25:69.19:769,69,0	1/1:3,24:27:57.14:635,57,0	1/1:14,18:31:51.06:559,51,0	0/0:0,0:12:29.67:0,30,101	1/1:3,19:22:57.15:635,57,0	1/1:1,13:14:33.08:368,33,0	1/1:2,23:25:48.12:535,48,0	1/1:3,0:15:32.93:144,33,0	1/1:2,24:26:69.17:769,69,0	1/1:3,22:26:51.90:628,52,0	1/1:0,13:13:36.10:401,36,0	1/1:5,30:34:81.21:903,81,0	1/1:1,20:21:57.15:635,57,0	1/1:2,14:16:42.11:462,42,0	1/1:1,22:22:57.14:629,57,0	1/1:1,32:33:84.18:923,84,0	1/1:2,0:17:24.70:107,25,0	1/1:4,0:19:27.91:120,28,0	1/1:5,0:36:73.38:317,73,0	1/1:2,15:17:45.12:502,45,0	1/1:2,26:28:78.20:869,78,0	1/1:1,16:17:42.11:468,42,0	1/1:0,12:12:36.10:401,36,0
chr10	67806119	.	T	TATACAC	13910.28	PASS	AB=0.815;AC=42;AF=0.750;AN=56;BaseQRankSum=-5.256;DP=708;FS=7.604;HRun=0;HaplotypeScore=206.4550;InbreedingCoeff=0.7139;MQ=58.83;MQ0=6;MQRankSum=-6.526;QD=23.66;ReadPosRankSum=-1.299;VQSLOD=3.6187;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:23,27:51:16.55:488,17,0	1/1:5,6:12:3.01:98,3,0	0/1:25,0:16:21.41:21,0,91	0/0:28,0:20:8.83:0,9,142	1/1:6,25:35:3.01:90,3,0	1/1:3,12:15:18.06:573,18,0	1/1:4,13:18:9.03:294,9,0	1/1:40,0:40:72.19:1282,72,0	1/1:2,13:18:15.05:466,15,0	1/1:7,27:39:93.24:2073,93,0	0/0:8,12:24:2.72:0,3,18	1/1:6,14:28:21.07:666,21,0	0/0:17,0:17:39.12:0,39,761	1/1:4,15:22:9.03:293,9,0	1/1:9,25:38:21.07:685,21,0	1/1:4,14:21:30.10:960,30,0	1/1:10,13:26:12.04:391,12,0	1/1:7,9:17:15.05:486,15,0	1/1:8,13:22:42.10:871,42,0	1/1:8,15:26:5.59:195,6,0	0/1:12,13:29:0:0,0,0	0/0:14,0:14:36.11:0,36,684	0/0:18,0:18:48.15:0,48,963	0/0:19,0:19:36.09:0,36,641	1/1:10,13:28:14.98:472,15,0	1/1:5,20:32:66.21:1775,66,0	1/1:7,12:22:18.06:589,18,0	1/1:5,14:21:32.80:1142,33,0
chr10	67807139	.	C	CTTTT	7296.40	PASS	AB=0.688;AC=48;AF=0.857;AN=56;BaseQRankSum=-1.736;DP=621;FS=5.162;HRun=14;HaplotypeScore=137.0555;InbreedingCoeff=0.1860;MQ=74.22;MQ0=1;MQRankSum=-0.520;QD=12.10;ReadPosRankSum=-5.083;VQSLOD=0.6355;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:46:26.81:370,27,0	0/1:6,0:15:25.19:51,0,25	0/1:23,0:18:1.52:2,0,100	0/0:17,0:15:8.17:0,8,84	1/1:9,0:31:38.20:781,38,0	1/1:15,1:20:15.82:378,16,0	1/1:6,0:21:23.82:255,24,0	0/1:17,1:28:6.57:234,0,7	0/1:7,1:19:7.02:154,0,7	1/1:10,0:27:43.27:460,43,0	1/1:8,3:17:22.49:264,22,0	1/1:12,0:26:19.87:208,20,0	1/1:15,0:15:15.03:245,15,0	1/1:4,0:16:11.87:111,12,0	1/1:4,0:23:21.26:222,21,0	1/1:5,0:19:27.99:326,28,0	1/1:6,0:28:33.37:223,33,0	0/1:9,0:30:60.88:189,0,61	1/1:10,0:23:41.80:442,42,0	1/1:3,0:16:35.84:367,36,0	1/1:8,0:18:13.57:164,14,0	1/1:15,0:15:24.83:378,25,0	1/1:9,0:9:6.02:115,6,0	1/1:26,0:25:21.54:383,22,0	1/1:8,0:19:25.46:260,25,0	1/1:18,0:34:14.79:295,15,0	1/1:10,1:23:30.80:400,31,0	0/1:4,0:12:20.95:21,0,63
chr10	67807463	.	G	GGTGAGCCCT	5010.99	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-2.119;DP=668;FS=9.044;HRun=0;HaplotypeScore=176.4880;InbreedingCoeff=0.9970;MQ=91.74;MQ0=0;MQRankSum=-9.936;QD=70.58;ReadPosRankSum=0.351;VQSLOD=4.3952;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,135,3830	0/0:11,0:11:33.11:0,33,931	0/0:34,0:34:84.27:0,84,2136	0/0:25,0:25:57.10:0,57,1318	0/0:30,0:30:75.23:0,75,1912	0/0:23,0:23:60.20:0,60,1683	0/0:20,0:20:54.16:0,54,1458	0/0:17,0:17:45.14:0,45,1017	0/0:17,0:17:39.10:0,39,1046	0/0:24,0:24:66.21:0,66,1745	0/0:21,0:21:54.17:0,54,1466	0/0:19,0:19:45.15:0,45,1283	1/1:4,10:18:38.67:1642,39,0	0/0:25,0:25:63.21:0,63,1693	0/0:22,0:22:60.15:0,60,1535	0/0:19,0:19:54.17:0,54,1489	0/0:43,0:43:99:0,117,3048	0/0:23,0:23:57.17:0,57,1515	0/0:18,0:18:39.10:0,39,994	0/0:17,0:17:48.16:0,48,1333	0/0:38,0:38:99:0,102,2816	1/1:5,11:16:27.09:1266,27,0	1/1:6,12:20:27.09:1256,27,0	1/1:7,9:17:18.06:848,18,0	0/0:21,0:21:57.20:0,57,1671	0/0:27,0:27:69.23:0,69,1910	0/0:34,0:34:90.30:0,90,2511	0/0:17,0:17:51.18:0,51,1458
chr10	67808870	.	GGTGT	G	2457.01	PASS	AB=0.758;AC=35;AF=0.673;AN=52;BaseQRankSum=-3.568;DP=523;FS=2.819;HRun=0;HaplotypeScore=98.3055;InbreedingCoeff=0.1632;MQ=78.61;MQ0=6;MQRankSum=0.463;QD=6.22;ReadPosRankSum=1.936;VQSLOD=2.0013;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:23,7:30:15.05:233,15,0	./.	0/0:31,0:24:2.74:0,3,12	./.	1/1:10,3:12:5.95:65,6,0	1/1:8,1:11:5.86:74,6,0	1/1:16,7:23:9.03:140,9,0	0/0:20,0:20:3.01:0,3,49	0/1:14,1:19:3.75:66,0,4	1/1:21,3:24:1.24:44,1,0	1/1:8,4:12:6.02:93,6,0	0/1:11,3:14:65.90:82,0,66	0/1:14,1:20:29.94:30,0,44	1/1:12,10:22:21.07:327,21,0	1/1:4,7:12:15.04:215,15,0	1/1:10,4:16:2.55:156,3,0	1/1:19,11:29:27.01:420,27,0	0/1:13,4:18:9.21:109,0,9	1/1:12,4:16:11.82:142,12,0	1/1:10,4:14:9.03:140,9,0	1/1:37,4:40:3.47:47,3,0	0/0:12,0:13:5.75:0,6,56	0/0:7,0:9:10.63:0,11,49	0/1:18,1:28:18.99:19,0,82	1/1:9,4:13:6.02:93,6,0	0/0:16,0:21:20.55:0,21,168	0/1:7,2:9:40.68:41,0,44	0/1:3,2:9:22.49:79,0,22
chr10	67809326	.	GGATGGGGTTA	G	3373.57	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.639;DP=608;FS=9.212;HRun=0;HaplotypeScore=179.4267;InbreedingCoeff=0.9969;MQ=79.18;MQ0=0;MQRankSum=-9.448;QD=64.88;ReadPosRankSum=0.168;VQSLOD=2.5514;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,20:27:54.19:1751,54,0	0/0:7,0:7:21.07:0,21,1076	0/0:19,0:19:28.08:0,28,1405	0/0:16,0:16:26.98:0,27,833	1/1:2,23:25:51.18:1623,51,0	0/0:13,0:13:39.13:0,39,1992	0/0:24,0:24:69.22:0,69,3519	0/0:30,0:30:81.27:0,81,3895	0/0:19,0:19:54.19:0,54,2670	0/0:25,0:25:69.24:0,69,3429	0/0:23,0:23:69.22:0,69,3390	0/0:23,0:23:69.24:0,69,3570	0/0:21,0:21:57.20:0,57,2886	0/0:21,0:21:63.20:0,63,3080	0/0:27,0:27:75.26:0,75,3904	0/0:15,0:15:45.15:0,45,2326	0/0:25,0:25:66.20:0,66,3280	0/0:20,0:20:60.21:0,60,3097	0/0:15,0:15:45.15:0,45,2164	0/0:16,0:16:45.15:0,45,2370	0/0:36,0:36:99:0,102,5164	0/0:17,0:17:48.16:0,48,2428	0/0:25,0:25:72.25:0,72,3549	0/0:34,0:34:90.31:0,90,4702	0/0:22,0:22:66.23:0,66,3144	0/0:27,0:27:75.26:0,75,3838	0/0:21,0:21:63.22:0,63,3103	0/0:15,0:15:45.15:0,45,2185
chr10	67809835	.	GA	G	399.90	PASS	AB=0.571;AC=7;AF=0.125;AN=56;BaseQRankSum=6.507;DP=455;FS=1.980;HRun=3;HaplotypeScore=44.3199;InbreedingCoeff=0.8329;MQ=55.82;MQ0=9;MQRankSum=-1.868;QD=17.39;ReadPosRankSum=-1.322;VQSLOD=2.7702;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:72.24:0,72,1028	0/0:3,0:3:9.01:0,9,94	0/0:22,0:6:15.04:0,15,197	0/0:26,0:9:27.02:0,27,348	0/0:21,0:21:63.20:0,63,884	0/0:18,0:18:54.17:0,54,759	0/0:23,0:22:43.12:0,43,802	0/0:17,0:16:42.13:0,42,579	0/0:22,0:21:63.20:0,63,885	0/0:20,0:20:57.16:0,57,786	0/0:17,0:17:51.16:0,51,716	0/0:20,0:20:60.20:0,60,864	1/1:1,4:4:9.03:111,9,0	0/0:20,0:20:57.19:0,57,821	0/0:17,0:17:51.17:0,51,734	0/0:17,0:17:48.14:0,48,654	0/0:12,0:12:36.06:0,36,464	0/0:16,1:17:35.98:0,36,566	0/0:15,0:14:39.11:0,39,517	0/0:20,0:20:60.20:0,60,860	0/0:17,0:17:51.15:0,51,710	1/1:3,7:10:24.70:250,25,0	1/1:2,2:4:6.02:74,6,0	0/1:1,3:4:1.64:100,0,2	0/0:20,0:20:60.20:0,60,863	0/0:18,0:18:51.16:0,51,714	0/0:15,0:15:45.13:0,45,628	0/0:11,0:11:33.11:0,33,474
chr10	67810651	.	C	CGTT	3643.09	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-5.906;DP=494;FS=1.746;HRun=0;HaplotypeScore=73.3286;InbreedingCoeff=0.9931;MQ=81.87;MQ0=1;MQRankSum=-3.048;QD=54.37;ReadPosRankSum=2.887;VQSLOD=5.6317;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:66.23:0,66,1098	0/0:10,0:10:30.06:0,30,469	0/0:15,0:16:47.98:0,48,709	0/0:17,0:16:44.81:0,45,626	0/0:21,0:21:57.14:0,57,880	0/0:16,0:16:45.15:0,45,749	0/0:18,0:18:54.18:0,54,892	0/0:23,0:23:60.19:0,60,954	0/0:21,0:21:63.22:0,63,1048	0/0:19,0:19:48.16:0,48,775	0/0:14,0:14:42.14:0,42,692	0/0:16,0:16:42.13:0,42,675	1/1:3,13:16:42.14:937,42,0	0/0:17,0:17:45.15:0,45,734	0/0:16,0:16:45.15:0,45,748	0/0:13,0:13:36.12:0,36,599	0/0:20,0:20:54.17:0,54,855	0/0:26,0:26:69.22:0,69,1118	0/0:8,0:8:21.07:0,21,350	0/0:20,0:20:54.17:0,54,874	0/0:8,0:8:21.07:0,21,349	1/1:5,17:22:57.14:1185,57,0	1/1:0,7:7:15.05:339,15,0	1/1:3,19:22:54.65:1182,55,0	0/0:17,0:17:45.13:0,45,716	0/0:25,0:25:75.25:0,75,1205	0/0:24,0:24:69.19:0,69,1117	0/0:13,0:13:39.07:0,39,617
chr10	67810690	.	C	CT	621.17	PASS	AB=0.905;AC=15;AF=0.268;AN=56;BaseQRankSum=-3.410;DP=472;FS=0.609;HRun=15;HaplotypeScore=72.4983;InbreedingCoeff=0.0904;MQ=71.53;MQ0=2;MQRankSum=-0.788;QD=2.74;ReadPosRankSum=-2.078;VQSLOD=-0.6466;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,21:30:17.95:259,18,0	0/0:5,0:5:10.62:0,11,58	1/1:18,0:8:0.47:1,0,0	0/1:25,0:17:22.75:23,0,34	1/1:8,16:24:12.16:251,12,0	0/0:20,0:21:13.12:0,13,149	0/1:13,2:16:5.79:6,0,75	0/1:32,0:32:31.32:31,0,136	0/0:14,0:14:23.37:0,23,143	0/0:15,0:16:20.95:0,21,137	0/0:18,0:19:31.13:0,31,185	0/0:10,0:11:16.27:0,16,88	0/0:5,0:11:12.17:0,12,35	0/1:14,1:15:1.68:2,0,102	0/0:13,0:13:17.31:0,17,107	0/1:6,2:8:35.55:36,0,39	0/0:25,0:28:39.53:0,40,304	0/0:21,0:21:29.11:0,29,178	0/1:11,1:12:27.74:28,0,67	0/1:16,3:19:46.34:76,0,46	0/1:5,2:7:25.57:37,0,26	0/0:10,0:17:17.83:0,18,51	0/0:2,0:6:7.92:0,8,23	0/0:9,0:21:28.76:0,29,92	0/0:12,0:11:23.02:0,23,133	0/1:20,1:21:27.85:28,0,68	0/0:19,1:21:2.46:0,2,122	0/0:6,0:8:7.85:0,8,42
chr10	67810894	.	GTTTGGGCACCTCAGGTCTGTGCTCTCATCCTTC	G	3887.19	PASS	AB=1.000;AC=17;AF=0.315;AN=54;BaseQRankSum=6.346;DP=301;FS=5.260;HRun=0;HaplotypeScore=200.5798;InbreedingCoeff=0.6224;MQ=72.87;MQ0=26;MQRankSum=-5.399;QD=62.70;ReadPosRankSum=3.006;VQSLOD=2.2385;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:6:0.47:0,0,1	0/0:5,0:5:0.47:0,0,1	0/0:33,0:16:44.65:0,45,3074	0/0:37,0:25:72.20:0,72,5011	0/0:7,5:11:2.36:0,2,6	1/1:8,0:8:2.89:250,3,0	0/0:12,0:10:0.85:0,1,4	1/1:6,0:6:0.47:1,0,0	0/0:14,0:14:39.08:0,39,4376	1/1:8,0:8:14.08:898,14,0	./.	1/1:7,0:6:6.02:401,6,0	0/0:9,0:8:18:0,18,2300	1/1:7,0:6:3.01:30,3,0	0/0:4,0:3:1.36:0,1,3	0/0:5,0:4:1.41:0,1,3	0/1:5,0:3:0.01:0,0,0	1/1:6,0:6:6.93:328,7,0	1/1:7,0:7:12.04:984,12,0	0/0:1,0:1:0.47:0,0,1	0/0:21,0:16:3.60:0,4,8	0/0:9,0:8:21.03:0,21,2513	0/0:15,0:15:42.14:0,42,4940	0/0:24,0:24:60.68:0,61,6725	0/0:6,0:5:0.94:0,1,2	0/0:17,0:16:41.31:0,41,5051	1/1:8,0:8:10.32:995,10,0	0/0:8,0:7:18.06:0,18,2176
chr10	67810895	.	TTTGGGCACCTCAG	T	1474.06	PASS	AB=0.698;AC=11;AF=0.204;AN=54;BaseQRankSum=6.957;DP=298;FS=9.393;HRun=0;HaplotypeScore=118.1650;InbreedingCoeff=0.3322;MQ=73.30;MQ0=23;MQRankSum=-5.077;QD=27.30;ReadPosRankSum=2.633;VQSLOD=2.2644;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:2,3:5:0:0,0,0	0/0:1,4:5:0.89:0,1,2	0/0:33,0:16:44.33:0,44,2479	0/0:37,0:25:72.25:0,72,3904	0/0:12,0:11:3.54:0,4,7	1/1:4,4:8:2.82:115,3,0	0/0:11,1:10:9.38:0,9,30	0/0:6,0:6:12.31:0,12,51	0/0:14,0:14:39.08:0,39,2144	0/1:5,3:8:12.35:366,0,12	./.	1/1:3,4:6:1.23:129,1,0	0/0:9,0:8:18.06:0,18,1118	1/1:1,5:6:1.25:3,1,0	0/0:3,1:3:2.92:0,3,9	0/0:4,1:4:1.39:0,1,3	0/0:4,0:2:3.22:0,3,13	0/1:4,1:5:4.60:117,0,5	0/1:3,4:7:5.26:423,0,5	0/0:1,0:1:0.89:0,1,2	0/0:17,3:16:1.29:0,1,3	0/0:9,0:8:23.97:0,24,1281	0/0:16,0:16:45.15:0,45,2707	0/0:25,0:25:63.21:0,63,3748	0/0:3,3:5:0.52:0,1,1	0/0:18,0:17:44.40:0,44,2922	0/1:4,4:8:7.37:440,0,7	0/0:7,0:7:18.06:0,18,1143
chr10	67810900	.	GCACC	G	280.03	PASS	AB=0.810;AC=13;AF=0.382;AN=34;BaseQRankSum=6.143;DP=230;FS=4.105;HRun=0;HaplotypeScore=79.1951;InbreedingCoeff=0.6847;MQ=94.07;MQ0=12;MQRankSum=-5.409;QD=6.83;ReadPosRankSum=3.653;VQSLOD=1.3025;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:35,0:18:51.17:0,51,1434	0/0:43,0:31:87.16:0,87,2285	./.	1/1:4,0:4:3.01:30,3,0	./.	./.	0/0:14,0:14:39.13:0,39,1127	1/1:4,1:5:8.97:89,9,0	./.	1/1:4,0:4:3.01:31,3,0	0/0:7,0:7:21.07:0,21,607	0/1:5,0:5:0:0,0,0	./.	./.	./.	0/1:1,1:2:8.41:24,0,8	1/1:4,0:4:12.02:117,12,0	./.	0/1:9,4:11:0.06:0,0,0	0/0:9,0:9:24.08:0,24,701	0/0:15,0:15:45.15:0,45,1294	0/0:24,0:24:66.22:0,66,1848	./.	0/0:16,0:16:48.16:0,48,1385	1/1:4,0:4:12.02:120,12,0	0/0:6,0:6:18.06:0,18,522
chr10	67810905	.	TCAG	T	218.34	PASS	AB=0.588;AC=13;AF=0.406;AN=32;BaseQRankSum=6.539;DP=229;FS=7.691;HRun=0;HaplotypeScore=78.3845;InbreedingCoeff=0.7987;MQ=101.89;MQ0=7;MQRankSum=-6.201;QD=6.82;ReadPosRankSum=2.801;VQSLOD=1.5369;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:33,0:19:51.13:0,51,1114	0/0:42,0:34:87.26:0,87,1995	./.	1/1:4,0:4:2.99:24,3,0	./.	./.	0/0:13,0:13:39.13:0,39,960	1/1:3,1:4:10.23:76,10,0	./.	1/1:4,0:4:4.56:32,5,0	0/0:7,0:7:21.07:0,21,513	./.	./.	./.	./.	1/1:1,1:2:2.89:24,3,0	1/1:4,0:4:11.97:97,12,0	./.	0/1:3,7:10:0:0,0,0	0/0:11,0:11:30.09:0,30,688	0/0:16,0:16:48.16:0,48,1140	0/0:26,0:26:72.20:0,72,1668	./.	0/0:18,0:18:54.19:0,54,1312	1/1:4,0:4:11.98:98,12,0	0/0:6,0:6:18.06:0,18,444
chr10	67810915	.	GCTCTCATCCTTC	G	1484.39	PASS	AB=0.500;AC=13;AF=0.406;AN=32;BaseQRankSum=6.575;DP=224;FS=14.454;HRun=0;HaplotypeScore=118.7007;InbreedingCoeff=0.8086;MQ=121.64;MQ0=1;MQRankSum=-6.523;QD=46.39;ReadPosRankSum=3.664;VQSLOD=2.5854;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/0:21,0:19:51.16:0,51,2860	0/0:39,0:38:99:0,106,5568	./.	1/1:0,4:4:3.01:112,3,0	./.	./.	0/0:17,0:17:51.18:0,51,3181	1/1:0,3:4:11.83:350,12,0	./.	1/1:0,4:4:6.02:168,6,0	0/0:11,0:11:33.11:0,33,2088	./.	./.	./.	./.	1/1:0,1:2:3.01:112,3,0	1/1:0,4:4:12.04:428,12,0	./.	0/1:0,5:10:0:0,0,1	0/0:12,0:12:33.11:0,33,2069	0/0:14,0:14:42.14:0,42,2652	0/0:28,0:28:78.27:0,78,4858	./.	0/0:22,0:21:66.23:0,66,3974	1/1:0,4:4:12.04:448,12,0	0/0:5,0:5:15.05:0,15,954
chr10	67811509	.	GTAATGATAATAATAATAA	G	4359.82	PASS	AB=0.764;AC=44;AF=0.815;AN=54;BaseQRankSum=0.567;DP=222;FS=0.000;HRun=0;HaplotypeScore=82.0863;InbreedingCoeff=0.1852;MQ=74.93;MQ0=2;MQRankSum=-3.109;QD=22.47;ReadPosRankSum=2.162;VQSLOD=2.8177;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:0,0:19:7.94:8,0,246	1/1:0,0:4:9.03:280,9,0	0/0:14,0:12:26.96:0,27,250	0/0:6,0:4:6.02:0,6,73	0/1:8,0:8:59.11:114,0,59	1/1:3,0:19:18.06:437,18,0	1/1:4,0:4:6.47:53,6,0	1/1:32,0:30:49.43:477,49,0	0/0:6,0:6:3.01:0,3,162	./.	1/1:5,0:5:6.01:64,6,0	1/1:0,5:5:3.01:139,3,0	1/1:1,0:1:3:28,3,0	1/1:3,0:3:5.98:70,6,0	1/1:0,2:2:3.01:153,3,0	1/1:2,2:4:3.01:153,3,0	1/1:0,0:19:12.04:293,12,0	0/1:10,0:10:85.14:94,0,85	1/1:1,11:12:33.01:573,33,0	1/1:0,3:3:6.02:177,6,0	1/1:1,0:1:3:27,3,0	1/1:3,0:3:3:28,3,0	1/1:0,0:2:2.84:14,3,0	1/1:2,0:2:2.97:20,3,0	1/1:2,16:18:12.04:583,12,0	0/1:1,0:5:16.50:17,0,62	1/1:0,7:7:9.03:459,9,0	1/1:0,0:6:8.69:101,9,0
chr10	67811511	.	AATG	A	2409.88	PASS	AC=50;AF=0.926;AN=54;BaseQRankSum=3.063;DP=205;FS=24.346;HRun=0;HaplotypeScore=41.3591;InbreedingCoeff=0.3476;MQ=72.02;MQ0=2;MQRankSum=-4.773;QD=12.96;ReadPosRankSum=2.973;VQSLOD=1.2363;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:19:11.98:107,12,0	1/1:4,0:4:9.01:86,9,0	0/0:13,0:11:26.96:0,27,250	0/0:5,0:3:6.02:0,6,73	1/1:7,0:7:18:157,18,0	1/1:18,0:18:18.02:170,18,0	1/1:3,0:3:8.99:77,9,0	1/1:27,0:25:65.93:584,66,0	1/1:0,5:5:3.01:51,3,0	./.	1/1:4,0:4:5.95:46,6,0	1/1:5,0:5:2.88:15,3,0	1/1:1,0:1:3:28,3,0	1/1:3,0:3:5.96:45,6,0	1/1:2,0:2:3:29,3,0	1/1:2,0:2:3:29,3,0	1/1:19,0:19:12.02:115,12,0	1/1:11,0:11:27.70:204,28,0	1/1:12,0:12:32.94:278,33,0	1/1:3,0:3:5.85:36,6,0	1/1:1,0:1:3:27,3,0	1/1:2,0:2:3:28,3,0	1/1:2,0:2:3:29,3,0	1/1:2,0:2:2.97:20,3,0	1/1:16,0:16:11.76:87,12,0	1/1:5,0:5:12:107,12,0	1/1:7,0:7:9.01:86,9,0	1/1:6,0:6:9.01:88,9,0
chr10	67812331	.	G	GGTGT	5645.36	PASS	AB=0.849;AC=28;AF=0.538;AN=52;BaseQRankSum=-3.273;DP=733;FS=0.523;HRun=0;HaplotypeScore=167.0951;InbreedingCoeff=0.6070;MQ=66.22;MQ0=9;MQRankSum=1.529;QD=12.98;ReadPosRankSum=-1.087;VQSLOD=4.3398;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:33:11.45:0,11,451	0/0:8,0:10:17.98:0,18,243	./.	./.	0/0:25,0:26:33.08:0,33,454	0/1:21,8:32:35.30:122,0,35	1/1:19,7:30:41.60:804,42,0	0/0:27,0:25:8.86:0,9,101	0/1:15,0:16:25.09:25,0,133	1/1:25,0:30:29.79:531,30,0	1/1:14,4:20:6:135,6,0	0/1:13,10:27:13.15:552,0,13	0/0:16,0:27:35.95:0,36,335	1/1:11,4:19:17.53:292,18,0	1/1:18,18:41:37.15:692,37,0	1/1:14,16:34:10.23:599,10,0	0/0:21,0:23:19.22:0,19,359	0/0:24,0:26:7.15:0,7,354	0/1:22,0:21:47.14:252,0,47	1/1:8,7:19:14.79:295,15,0	1/1:29,6:42:18.09:118,18,0	0/0:2,0:10:18.02:0,18,167	0/0:5,0:14:21.02:0,21,196	0/0:20,0:35:32.74:0,33,326	1/1:19,8:32:4.45:295,4,0	1/1:20,2:28:27.07:477,27,0	1/1:22,2:25:19.66:287,20,0	1/1:11,5:16:9.03:169,9,0
chr10	67812343	.	T	TGTGT	5425.80	PASS	AB=1.000;AC=27;AF=0.519;AN=52;BaseQRankSum=-5.369;DP=803;FS=1.123;HRun=0;HaplotypeScore=160.0587;InbreedingCoeff=0.7106;MQ=56.27;MQ0=14;MQRankSum=-0.035;QD=12.25;ReadPosRankSum=-0.058;VQSLOD=4.5900;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:42:18.92:0,19,472	0/0:9,0:9:17.83:0,18,243	./.	./.	0/0:31,0:31:32.86:0,33,454	0/1:32,0:32:34.91:123,0,35	1/1:35,0:35:42.48:806,42,0	0/0:34,0:30:7.90:0,8,100	0/0:16,0:16:11.85:0,12,148	1/1:32,0:31:29.79:531,30,0	1/1:23,0:23:6.02:135,6,0	0/1:28,0:27:38.21:549,0,38	0/0:30,0:29:35.95:0,36,335	1/1:23,0:23:17.53:292,18,0	1/1:40,0:40:38.03:693,38,0	1/1:33,0:33:7.22:559,7,0	0/0:27,0:27:19.21:0,19,359	0/0:28,0:28:25.75:0,26,377	0/1:27,0:26:54.81:144,0,55	1/1:23,0:23:14.79:295,15,0	1/1:45,0:45:17.68:117,18,0	0/0:13,0:13:18.02:0,18,167	0/0:17,0:16:21.02:0,21,196	0/0:39,0:38:32.36:0,32,325	1/1:30,0:30:20.51:316,21,0	1/1:26,0:26:24.06:418,24,0	1/1:19,5:24:19.66:287,20,0	1/1:21,0:20:13.85:161,14,0
chr10	67813750	.	A	ATG	26989.70	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-15.159;DP=656;FS=4.152;HRun=0;HaplotypeScore=77.3458;InbreedingCoeff=0.9964;MQ=84.68;MQ0=3;MQRankSum=-4.524;QD=49.61;ReadPosRankSum=4.218;VQSLOD=6.0191;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,40:42:99:2079,111,0	1/1:0,15:15:45.15:841,45,0	0/0:20,0:20:56.91:0,57,755	0/0:20,0:20:41.81:0,42,528	1/1:2,16:18:45.15:842,45,0	1/1:2,27:31:75.26:1405,75,0	1/1:3,31:34:93.32:1739,93,0	1/1:1,27:29:84.25:1530,84,0	1/1:0,28:28:78.27:1461,78,0	1/1:0,17:17:51.17:955,51,0	1/1:2,8:10:24.08:445,24,0	1/1:2,26:29:72.25:1348,72,0	0/0:16,0:16:48.16:0,48,706	1/1:1,24:25:69.24:1291,69,0	1/1:0,29:29:87.30:1629,87,0	1/1:0,25:24:69.24:1292,69,0	1/1:2,30:32:78.27:1460,78,0	1/1:3,20:22:51.17:955,51,0	1/1:0,17:18:51.17:937,51,0	1/1:1,17:18:45.15:842,45,0	1/1:3,36:39:96.33:1798,96,0	0/0:16,0:16:48.16:0,48,705	0/0:18,0:18:54.18:0,54,795	0/0:22,0:22:63.16:0,63,888	1/1:1,24:26:66.16:1235,66,0	1/1:1,20:22:62.98:1163,63,0	1/1:0,27:27:78.27:1460,78,0	1/1:0,6:5:15.05:281,15,0
chr10	67814021	.	G	GGTGTGT	18127.03	PASS	AB=0.573;AC=42;AF=0.750;AN=56;BaseQRankSum=-10.289;DP=856;FS=14.525;HRun=0;HaplotypeScore=177.2525;InbreedingCoeff=0.7185;MQ=57.87;MQ0=7;MQRankSum=-8.244;QD=28.19;ReadPosRankSum=0.829;VQSLOD=3.9118;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,23:37:18.06:575,18,0	1/1:3,9:14:24.08:755,24,0	0/0:53,0:27:40.19:0,40,486	0/0:50,0:26:15:0,15,444	1/1:5,17:25:14.97:378,15,0	1/1:3,25:29:20.39:1051,20,0	1/1:15,20:39:24:623,24,0	1/1:32,0:41:57.45:1335,57,0	0/1:6,14:25:7.64:477,0,8	1/1:13,19:35:64.90:1279,65,0	1/1:6,16:27:6.02:201,6,0	1/1:5,24:34:30.77:1003,31,0	0/0:28,0:28:63.12:0,63,701	1/1:7,21:29:27.09:902,27,0	1/1:8,30:39:45.15:1405,45,0	1/1:9,21:31:24.08:802,24,0	1/1:8,22:30:1.52:742,2,0	0/1:4,10:15:38.28:545,0,38	1/1:10,14:25:46.65:899,47,0	1/1:6,11:23:25.60:649,26,0	1/1:14,20:39:2.74:12,3,0	0/0:24,0:25:51.57:0,52,551	0/0:30,0:30:66.05:0,66,712	0/0:26,0:26:54.05:0,54,591	1/1:5,17:27:26.88:771,27,0	1/1:3,34:38:92.93:2307,93,0	1/1:8,23:33:42.61:1277,43,0	1/1:0,2:2:6.02:139,6,0
chr10	67814038	.	A	ATG	2710.50	PASS	AB=1.000;AC=16;AF=0.286;AN=56;BaseQRankSum=6.097;DP=907;FS=3.791;HRun=0;HaplotypeScore=191.6357;InbreedingCoeff=0.3299;MQ=52.88;MQ0=14;MQRankSum=-6.091;QD=7.93;ReadPosRankSum=13.967;VQSLOD=1.2239;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:11.58:0,12,189	0/1:13,0:13:3.25:3,0,61	0/0:78,0:31:38.55:0,39,475	0/0:75,0:28:41.31:0,41,406	0/0:23,0:23:6.73:0,7,99	0/1:27,0:27:3.31:3,0,146	0/0:33,0:32:9.27:0,9,168	0/0:47,0:45:57.44:0,57,844	0/0:28,0:28:11.13:0,11,328	0/0:33,0:33:28.19:0,28,427	0/0:23,0:23:4.92:0,5,104	0/1:36,0:35:3.54:4,0,165	1/1:5,27:32:39.43:776,39,0	0/1:26,0:26:5.46:5,0,143	0/0:43,0:43:5.42:0,5,397	0/0:32,0:32:15.39:0,15,300	0/1:27,0:26:28.12:28,0,87	0/0:20,0:20:18.06:0,18,241	0/0:23,0:22:27.51:0,28,247	0/0:25,0:25:19.81:0,20,235	0/0:36,0:36:20.60:0,21,232	1/1:8,18:27:35.91:554,36,0	1/1:7,22:29:45.15:738,45,0	1/1:4,29:33:45.15:738,45,0	0/1:28,0:28:19.07:19,0,137	0/1:39,0:39:7.75:8,0,279	0/1:25,0:24:1.68:2,0,113	0/0:4,0:3:3.75:0,4,40
chr10	67815366	.	TG	T	10070.78	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=12.794;DP=611;FS=3.991;HRun=3;HaplotypeScore=63.1303;InbreedingCoeff=0.9985;MQ=81.84;MQ0=0;MQRankSum=-2.813;QD=34.73;ReadPosRankSum=2.501;VQSLOD=5.6285;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,132,1961	0/0:10,0:10:24.07:0,24,341	0/0:17,0:16:42.03:0,42,578	0/0:20,0:20:47.14:0,47,613	0/0:13,0:13:33.09:0,33,468	1/1:1,16:17:45.15:584,45,0	1/1:1,34:35:84.27:1090,84,0	0/0:26,0:26:78.26:0,78,1155	0/0:16,0:16:48.15:0,48,696	1/1:2,29:31:87.26:1111,87,0	1/1:0,10:10:24.08:311,24,0	1/1:0,18:18:54.18:701,54,0	0/0:15,0:15:45.15:0,45,673	1/1:1,27:28:78.24:998,78,0	1/1:1,25:26:66.21:857,66,0	1/1:0,15:15:42.14:545,42,0	0/0:33,0:33:99:0,99,1413	0/0:24,0:24:72.24:0,72,1077	1/1:0,21:21:63.20:807,63,0	1/1:1,14:15:33.11:421,33,0	1/1:0,38:38:99:1363,105,0	0/0:16,0:16:48.15:0,48,696	0/0:22,0:22:63.20:0,63,911	0/0:34,0:34:99:0,99,1421	1/1:0,18:18:51.13:660,51,0	0/0:20,1:21:24.23:0,24,840	1/1:0,18:18:48.16:623,48,0	0/0:7,0:7:21.04:0,21,273
chr10	67818672	.	AAAC	A	5631.57	PASS	AC=44;AF=0.846;AN=52;BaseQRankSum=-1.107;DP=628;FS=0.000;HRun=0;HaplotypeScore=112.8523;InbreedingCoeff=0.8033;MQ=68.11;MQ0=3;MQRankSum=-1.131;QD=11.22;ReadPosRankSum=1.443;VQSLOD=3.9663;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:30:8.67:140,9,0	0/0:5,0:9:6.69:0,7,108	1/1:37,0:30:2.04:6,2,0	./.	1/1:13,0:19:11.42:72,11,0	1/1:8,17:25:33.11:439,33,0	1/1:13,19:32:39.13:519,39,0	0/0:22,0:22:15.45:0,15,164	1/1:9,0:26:23.70:167,24,0	1/1:12,14:26:32.85:397,33,0	1/1:6,11:17:14.03:307,14,0	1/1:10,16:27:39.09:500,39,0	1/1:9,0:22:29.75:209,30,0	1/1:14,10:24:21.07:280,21,0	1/1:12,13:25:33.11:439,33,0	1/1:8,14:24:39.06:481,39,0	0/0:15,0:36:60.14:0,60,766	0/0:8,0:23:39.13:0,39,531	./.	1/1:10,7:17:15.05:200,15,0	1/1:15,16:31:30.10:399,30,0	1/1:9,0:18:5.91:42,6,0	1/1:4,0:11:8.51:62,9,0	1/1:16,0:32:20.83:147,21,0	1/1:5,5:10:3.01:40,3,0	1/1:7,0:17:23.76:164,24,0	1/1:6,19:25:39.13:519,39,0	1/1:2,0:7:14.88:105,15,0
chr10	67819968	.	T	TA	12126.83	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-8.632;DP=438;FS=1.325;HRun=5;HaplotypeScore=42.3805;InbreedingCoeff=0.9377;MQ=71.09;MQ0=0;MQRankSum=-1.559;QD=32.00;ReadPosRankSum=1.417;VQSLOD=5.1436;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,31:32:72.23:940,72,0	1/1:0,5:5:15.05:197,15,0	0/0:17,0:13:8.76:0,9,165	0/0:10,0:8:14.71:0,15,137	1/1:0,20:21:57.01:718,57,0	1/1:1,18:19:51.16:666,51,0	1/1:1,9:10:15.05:197,15,0	1/1:1,40:41:99:1494,120,0	1/1:1,7:8:18.06:237,18,0	1/1:1,21:22:63.18:800,63,0	1/1:1,10:11:24.08:309,24,0	1/1:2,12:14:21.07:276,21,0	0/0:10,0:10:30.06:0,30,315	1/1:0,5:5:12.04:151,12,0	1/1:0,10:10:24.08:316,24,0	1/1:1,8:9:24.08:316,24,0	1/1:2,36:38:96.31:1263,96,0	1/1:2,32:34:90.29:1184,90,0	1/1:2,7:9:21.07:276,21,0	1/1:2,10:12:30.10:385,30,0	1/1:4,5:9:15.05:197,15,0	0/0:2,0:2:6.02:0,6,64	0/0:11,0:11:24.04:0,24,244	0/0:6,0:6:15.04:0,15,161	1/1:2,22:24:31.65:758,32,0	1/1:1,15:16:45.14:578,45,0	1/1:0,16:16:36.12:473,36,0	1/1:1,13:14:30.10:395,30,0
chr10	67821068	.	GC	G	2455.55	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.045;DP=691;FS=1.591;HRun=1;HaplotypeScore=66.8894;InbreedingCoeff=0.9995;MQ=77.79;MQ0=0;MQRankSum=-2.609;QD=37.21;ReadPosRankSum=2.001;VQSLOD=4.3033;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:60,0:60:99:0,175,2725	0/0:12,0:12:36.12:0,36,575	0/0:11,0:11:26.89:0,27,371	0/0:20,0:20:56.40:0,56,866	0/0:20,0:20:56.53:0,57,821	0/0:24,0:24:72.23:0,72,1123	0/0:30,0:30:90.31:0,90,1437	0/0:29,0:29:84.28:0,84,1322	1/1:1,15:16:42.61:588,43,0	0/0:25,0:25:72.23:0,72,1106	0/0:12,0:12:36.11:0,36,549	0/0:23,0:23:69.24:0,69,1095	0/0:21,0:21:63.21:0,63,997	0/0:25,0:25:72.23:0,72,1128	0/0:15,0:15:45.15:0,45,719	0/0:17,0:17:48.14:0,48,742	0/0:42,0:42:99:0,126,1959	0/0:17,0:17:48.16:0,48,767	0/0:34,0:34:96.24:0,96,1465	0/0:19,0:19:57.18:0,57,883	0/0:43,0:43:99:0,126,2014	0/0:28,0:28:84.26:0,84,1288	0/0:22,0:22:66.23:0,66,1055	0/0:25,0:25:75.16:0,75,1098	0/0:27,0:27:81.26:0,81,1267	1/1:1,31:32:51.35:1256,51,0	0/0:24,0:24:72.23:0,72,1127	1/1:0,18:18:54.18:755,54,0
chr10	67822033	.	G	GTT	11595.05	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-15.136;DP=656;FS=0.000;HRun=8;HaplotypeScore=75.7061;InbreedingCoeff=0.9981;MQ=78.65;MQ0=1;MQRankSum=-4.533;QD=37.04;ReadPosRankSum=2.455;VQSLOD=4.7120;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:43:99:0,108,1160	0/0:10,0:10:27.05:0,27,291	0/0:20,0:19:44.12:0,44,455	0/0:18,0:19:20.81:0,21,188	0/0:30,0:30:72.14:0,72,783	1/1:2,29:32:87.29:1362,87,0	1/1:3,19:22:48.16:753,48,0	0/0:35,0:35:99:0,99,1068	0/0:18,0:18:45.09:0,45,491	1/1:3,24:27:72.24:1134,72,0	1/1:0,17:17:48.16:762,48,0	1/1:5,20:26:47.61:695,48,0	0/0:22,0:22:60.11:0,60,646	1/1:4,24:28:54.18:857,54,0	1/1:1,23:24:53.67:817,54,0	1/1:3,23:26:72.20:1096,72,0	0/0:24,0:24:63.13:0,63,690	0/0:24,0:24:66.15:0,66,727	1/1:2,20:23:60.19:928,60,0	1/1:1,18:19:54.10:801,54,0	1/1:5,20:27:51.16:772,51,0	0/0:16,0:16:45.10:0,45,490	0/0:19,0:19:48.12:0,48,535	0/0:17,0:17:48.11:0,48,524	1/1:3,17:20:48.16:762,48,0	0/0:38,0:38:92.93:0,93,1078	1/1:2,18:20:54.18:857,54,0	0/0:8,0:8:18.04:0,18,200
chr10	67823528	.	A	AGAG	26476.28	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-12.349;DP=787;FS=7.382;HRun=0;HaplotypeScore=104.6305;InbreedingCoeff=0.9988;MQ=88.23;MQ0=0;MQRankSum=-7.194;QD=53.92;ReadPosRankSum=4.301;VQSLOD=6.9635;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,105,1694	0/0:6,0:6:18.06:0,18,300	0/0:33,0:33:90.29:0,90,1423	0/0:28,0:28:78.16:0,78,1143	0/0:24,0:24:60.20:0,60,999	1/1:1,18:19:39.13:882,39,0	1/1:3,21:24:57.20:1287,57,0	0/0:34,0:34:84.26:0,84,1308	0/0:34,0:34:99:0,102,1699	1/1:2,38:42:99:2583,123,0	1/1:1,11:12:33.11:747,33,0	1/1:1,20:22:45.15:1017,45,0	1/1:3,20:24:57.20:1257,57,0	1/1:2,21:26:63.22:1404,63,0	1/1:3,33:37:93.32:2101,93,0	1/1:3,30:33:78.27:1762,78,0	0/0:26,0:26:72.18:0,72,1113	0/0:19,0:19:57.16:0,57,917	1/1:3,18:21:53.17:1068,53,0	1/1:3,38:43:99:2613,117,0	1/1:0,37:37:96.33:2174,96,0	1/1:0,27:28:63.22:1420,63,0	1/1:4,20:24:51.13:1139,51,0	1/1:10,30:40:99:2041,102,0	1/1:3,28:33:75.26:1695,75,0	0/0:42,1:43:55.38:0,55,1902	1/1:1,22:26:57.20:1286,57,0	0/0:13,0:13:36.12:0,36,600
chr10	67823671	.	TAC	T	14285.28	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-2.074;DP=1108;FS=4.657;HRun=0;HaplotypeScore=302.6052;InbreedingCoeff=0.9994;MQ=53.67;MQ0=11;MQRankSum=-0.514;QD=22.22;ReadPosRankSum=3.703;VQSLOD=4.7104;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:66,0:66:99:0,172,2783	0/0:3,0:14:27.01:0,27,238	0/0:59,0:28:63.12:0,63,944	0/0:57,0:31:52.66:0,53,748	0/0:23,1:24:25.04:0,25,950	1/1:5,26:31:69.22:877,69,0	1/1:9,29:39:57.18:724,57,0	0/0:15,0:53:60.62:0,61,619	0/0:6,0:44:81.04:0,81,718	1/1:13,28:40:78.37:1170,78,0	1/1:1,19:20:36.11:452,36,0	1/1:9,29:38:81.11:1024,81,0	1/1:8,19:27:69.19:849,69,0	1/1:14,34:47:77.98:985,78,0	1/1:14,31:45:59.72:761,60,0	1/1:17,27:44:95.98:1181,96,0	0/0:3,0:44:90.05:0,90,798	0/0:7,0:32:59.98:0,60,532	1/1:14,5:19:39.11:471,39,0	1/1:10,25:36:65.99:826,66,0	1/1:25,54:101:99:1331,103,0	1/1:7,24:31:75.22:940,75,0	1/1:7,19:26:51.10:649,51,0	1/1:19,39:58:99:1286,103,0	1/1:7,14:21:30.09:381,30,0	0/0:8,0:40:86.39:0,86,699	1/1:3,13:17:28.51:377,29,0	0/0:9,0:32:63:0,63,550
chr10	67823723	.	GAC	G	4048.08	PASS	AB=0.750;AC=25;AF=0.446;AN=56;BaseQRankSum=11.472;DP=965;FS=20.597;HRun=0;HaplotypeScore=327.1887;InbreedingCoeff=0.9003;MQ=55.22;MQ0=3;MQRankSum=-8.211;QD=10.60;ReadPosRankSum=1.605;VQSLOD=2.4229;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:62,2:64:96.05:0,96,2480	0/0:16,0:16:42.14:0,42,710	0/0:46,0:32:44.90:0,45,903	0/0:63,0:49:98.05:0,98,1339	0/0:23,0:23:57.18:0,57,925	1/1:4,18:22:25.02:306,25,0	1/1:11,24:35:41.36:512,41,0	0/0:49,0:49:99:0,114,1795	0/0:44,0:44:99:0,102,1558	1/1:9,20:29:60.17:742,60,0	1/1:7,20:27:10.98:80,11,0	1/1:5,32:37:21.66:398,22,0	0/0:24,0:24:47.84:0,48,756	1/1:4,36:40:24.09:275,24,0	1/1:5,35:40:17.85:202,18,0	1/1:5,16:21:41.69:529,42,0	0/0:45,0:45:84.20:0,84,1335	0/0:29,1:30:36.35:0,36,1071	0/1:8,4:10:16:188,0,16	1/1:8,17:25:8.73:93,9,0	1/1:24,24:48:8.79:102,9,0	0/0:22,0:22:48.11:0,48,730	0/0:16,0:16:32.10:0,32,457	0/0:70,0:70:99:0,141,2305	1/1:3,20:23:11.92:156,12,0	0/0:44,0:44:99:0,123,2057	1/1:3,20:23:36.48:467,36,0	0/0:27,0:27:63.11:0,63,945
chr10	67823745	.	CAT	C	1958.93	PASS	AB=0.949;AC=20;AF=0.357;AN=56;BaseQRankSum=11.292;DP=1036;FS=6.760;HRun=0;HaplotypeScore=334.1147;InbreedingCoeff=0.3790;MQ=53.19;MQ0=4;MQRankSum=-10.097;QD=4.34;ReadPosRankSum=-1.722;VQSLOD=1.4888;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:62,0:62:99:0,174,3036	0/0:16,0:16:45.13:0,45,802	0/0:54,0:38:75.79:0,76,1550	0/0:79,0:57:99:0,135,2244	0/0:22,0:22:66.19:0,66,1195	1/1:25,1:26:10.90:171,11,0	0/1:34,1:35:99:129,0,237	0/0:48,0:48:99:0,138,2445	0/0:37,0:37:90.25:0,90,1692	0/1:28,5:33:99:477,0,106	0/1:21,0:21:4.60:19,0,5	0/1:42,0:42:4.21:119,0,4	0/0:30,0:30:29.13:0,29,317	1/1:51,0:51:7.64:72,8,0	1/1:43,1:44:21.56:152,22,0	1/1:30,0:30:24.42:191,24,0	0/0:36,0:36:87.26:0,87,1573	0/0:33,0:33:74.16:0,74,1344	0/1:11,4:14:38.99:188,0,39	0/1:23,1:24:3.01:149,0,3	1/1:61,6:66:8.91:191,9,0	0/0:24,0:24:6.73:0,7,228	0/1:14,0:14:11.77:12,0,105	0/0:72,1:73:99:0,112,941	1/1:22,0:22:1.19:179,1,0	0/0:50,0:50:99:0,150,2724	0/1:27,0:26:29.27:94,0,29	0/0:21,0:21:54.19:0,54,1040
chr10	67823747	.	T	TACAC	15336.94	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=2.065;DP=1059;FS=17.180;HRun=0;HaplotypeScore=318.1046;InbreedingCoeff=0.9670;MQ=52.99;MQ0=4;MQRankSum=-5.073;QD=25.60;ReadPosRankSum=0.573;VQSLOD=3.5959;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:62,0:62:99:0,146,2727	0/0:16,0:16:39.11:0,39,657	0/0:52,0:37:63.10:0,63,1322	0/0:73,0:55:99:0,125,2011	0/0:23,0:23:69.19:0,69,1166	1/1:7,19:26:33.03:667,33,0	1/1:14,20:34:28.88:520,29,0	0/0:49,0:49:99:0,123,2028	0/0:38,0:38:87.27:0,87,1536	1/1:17,16:33:81.09:1701,81,0	1/1:7,14:21:1.36:22,1,0	1/1:5,37:47:33.08:847,33,0	1/1:3,28:34:48.34:1261,48,0	1/1:6,43:54:32.56:860,33,0	1/1:12,34:47:35.84:814,36,0	1/1:2,30:32:45.15:1182,45,0	0/0:35,0:35:81.26:0,81,1436	0/0:31,0:32:56.21:0,56,1150	1/1:9,6:14:36.07:702,36,0	1/1:10,14:24:21.07:509,21,0	1/1:33,34:68:25.15:479,25,0	1/1:3,20:26:36.12:950,36,0	1/1:4,11:15:23.78:633,24,0	1/1:9,65:75:99:2814,108,0	1/1:3,19:22:24.02:509,24,0	0/0:50,0:50:99:0,135,2370	1/1:5,20:24:33.11:867,33,0	0/0:21,0:21:54.12:0,54,921
chr10	67824539	.	TTCTCTCTC	T	191.98	PASS	AC=4;AF=0.087;AN=46;BaseQRankSum=1.025;DP=496;FS=1.829;HRun=0;HaplotypeScore=127.1822;InbreedingCoeff=0.4308;MQ=58.60;MQ0=12;MQRankSum=-1.675;QD=5.19;ReadPosRankSum=2.375;VQSLOD=2.3510;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:36.12:0,36,1167	0/0:8,0:8:0.47:0,0,1	./.	./.	0/0:26,0:24:3.01:0,3,96	0/0:13,0:13:6.01:0,6,146	0/0:25,0:25:18.06:0,18,647	0/0:33,0:33:13.47:0,13,207	0/0:7,0:7:3.01:0,3,44	0/0:30,0:30:39.59:0,40,1178	0/0:6,0:6:3.01:0,3,105	0/0:8,0:7:9.03:0,9,277	1/1:8,3:10:9.03:222,9,0	0/0:15,0:14:12.51:0,13,375	0/0:16,0:15:3.01:0,3,121	0/0:10,0:10:9.03:0,9,339	0/0:33,0:32:36.30:0,36,1065	0/0:19,0:18:20.24:0,20,560	0/0:20,0:17:9.03:0,9,341	0/0:10,0:10:3.01:0,3,121	0/0:16,0:16:6.02:0,6,224	./.	./.	1/1:25,1:26:5.98:69,6,0	./.	0/0:16,0:14:9.03:0,9,271	0/0:15,0:14:12.04:0,12,419	0/0:19,0:16:4.82:0,5,31
chr10	67824855	.	CAT	C	17409.37	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=9.734;DP=524;FS=13.233;HRun=0;HaplotypeScore=157.3041;InbreedingCoeff=0.9563;MQ=79.39;MQ0=0;MQRankSum=-7.891;QD=40.87;ReadPosRankSum=2.939;VQSLOD=5.3095;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:72.25:0,72,1341	1/1:0,9:9:27.09:413,27,0	0/0:20,0:18:50.22:0,50,786	0/0:20,0:19:4.10:0,4,710	0/0:29,0:29:81.26:0,81,1518	1/1:0,15:15:42.14:642,42,0	1/1:0,22:22:66.22:1008,66,0	1/1:0,20:20:60.19:896,60,0	1/1:0,18:18:48.16:729,48,0	1/1:1,15:16:48.16:723,48,0	1/1:2,12:14:36.08:524,36,0	1/1:1,18:19:45.15:686,45,0	1/1:0,15:15:42.14:642,42,0	1/1:1,14:15:39.13:596,39,0	1/1:2,24:26:72.24:1101,72,0	1/1:1,20:21:54.18:826,54,0	1/1:1,14:15:39.13:596,39,0	1/1:0,17:17:45.15:688,45,0	1/1:1,12:13:36.12:551,36,0	1/1:0,20:20:60.16:891,60,0	1/1:0,23:23:54.10:774,54,0	1/1:2,18:20:51.13:754,51,0	1/1:1,13:14:39.05:544,39,0	1/1:1,33:34:80.17:1239,80,0	1/1:0,18:18:54.14:799,54,0	1/1:0,16:16:45.15:688,45,0	1/1:1,17:18:51.17:779,51,0	1/1:0,8:8:21.07:321,21,0
chr10	67824886	.	GGTGT	G	1647.65	PASS	AB=0.927;AC=27;AF=0.519;AN=52;BaseQRankSum=1.318;DP=591;FS=0.710;HRun=0;HaplotypeScore=205.2521;InbreedingCoeff=0.6889;MQ=60.41;MQ0=15;MQRankSum=-0.509;QD=5.35;ReadPosRankSum=2.330;VQSLOD=2.7239;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:22:6.01:56,6,0	0/0:8,0:8:2.65:0,3,57	0/0:49,0:20:2.29:0,2,6	./.	1/1:18,0:26:9.01:84,9,0	1/1:14,3:17:11.99:160,12,0	1/1:19,4:24:9.03:140,9,0	0/0:25,0:25:15.10:0,15,202	0/0:17,0:19:26.83:0,27,417	1/1:23,1:22:6.02:93,6,0	./.	1/1:13,3:16:11.95:133,12,0	0/0:12,0:14:8.50:0,8,62	1/1:11,2:13:3.01:47,3,0	1/1:21,6:27:17.93:200,18,0	1/1:15,2:18:11.99:140,12,0	0/0:17,0:20:21.54:0,22,346	0/0:18,0:19:21.07:0,21,357	1/1:19,1:20:9.03:140,9,0	1/1:17,3:20:9.03:131,9,0	0/0:32,0:32:0:0,0,0	0/0:17,0:19:11.49:0,11,115	0/0:11,0:12:3.01:0,3,68	0/1:35,2:38:57.72:58,0,556	1/1:17,4:21:15:190,15,0	0/0:15,0:15:21.06:0,21,306	1/1:17,4:21:18.05:262,18,0	0/0:10,0:10:18.06:0,18,313
chr10	67825624	.	CTT	C	5035.39	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=1.964;DP=683;FS=4.523;HRun=4;HaplotypeScore=102.7589;InbreedingCoeff=0.9853;MQ=63.40;MQ0=1;MQRankSum=0.798;QD=38.15;ReadPosRankSum=-1.067;VQSLOD=3.8679;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,163,2934	1/1:0,5:5:8.78:132,9,0	0/0:35,0:29:78.19:0,78,1353	0/0:33,0:30:80.21:0,80,1348	0/0:14,0:14:42.14:0,42,757	0/0:20,0:20:60.20:0,60,1094	0/0:20,0:20:54.16:0,54,977	1/1:1,29:30:87.27:1241,87,0	1/1:2,16:18:42.14:616,42,0	0/0:16,0:16:45.15:0,45,839	0/0:16,0:16:48.16:0,48,899	0/0:29,0:29:84.27:0,84,1515	0/0:28,0:28:81.28:0,81,1517	0/0:31,0:31:90.27:0,90,1634	0/0:33,0:33:99:0,99,1779	0/0:21,0:21:60.21:0,60,1124	1/1:2,34:36:93.31:1368,93,0	1/1:1,19:20:51.17:750,51,0	0/0:15,0:14:39.07:0,39,608	0/0:17,0:17:48.11:0,48,804	0/0:73,0:73:99:0,217,3899	0/0:9,0:9:27.09:0,27,505	0/0:9,0:9:24.06:0,24,390	0/0:34,0:34:99:0,102,1895	0/0:23,0:23:66.18:0,66,1199	1/1:1,17:18:48.16:707,48,0	0/0:21,0:21:63.21:0,63,1150	1/1:0,5:5:15.05:220,15,0
chr10	67825835	.	AT	A	6488.14	PASS	AB=1.000;AC=30;AF=0.536;AN=56;BaseQRankSum=-6.444;DP=444;FS=9.641;HRun=3;HaplotypeScore=72.4670;InbreedingCoeff=0.6827;MQ=65.94;MQ0=0;MQRankSum=-0.402;QD=25.34;ReadPosRankSum=2.000;VQSLOD=3.3678;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:96.19:0,96,1258	0/0:10,0:10:23.22:0,23,86	0/0:16,0:14:32.23:0,32,461	0/0:11,0:10:20.17:0,20,228	0/0:11,0:11:33.07:0,33,435	1/1:0,18:18:54.17:667,54,0	1/1:0,16:16:33.10:407,33,0	0/1:22,0:22:74.49:79,0,74	0/1:17,0:17:26.78:27,0,104	1/1:0,14:14:39.08:443,39,0	1/1:0,12:12:35.77:349,36,0	1/1:0,13:13:39.12:476,39,0	0/0:14,0:14:24.75:0,25,92	1/1:0,12:12:29.89:370,30,0	1/1:0,15:15:45.14:556,45,0	1/1:0,13:13:33.10:408,33,0	0/0:9,0:9:23.46:0,23,91	0/1:14,0:14:11.22:11,0,68	1/1:0,14:14:42.09:503,42,0	1/1:0,16:16:48.02:539,48,0	1/1:0,21:21:54.17:667,54,0	0/1:11,0:11:21.24:21,0,41	0/0:15,0:15:36.07:0,36,140	0/0:17,0:17:41.36:0,41,161	1/1:0,12:12:33.10:407,33,0	0/0:27,0:27:0.64:0,1,114	1/1:0,16:16:45.14:556,45,0	0/0:25,0:25:65.13:0,65,286
chr10	67825895	.	CGAGAGAGA	C	167.81	PASS	AB=0.938;AC=10;AF=0.208;AN=48;BaseQRankSum=3.541;DP=475;FS=43.158;HRun=0;HaplotypeScore=123.5170;InbreedingCoeff=-0.0349;MQ=74.65;MQ0=6;MQRankSum=-1.940;QD=1.27;ReadPosRankSum=0.338;VQSLOD=0.5180;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:9.47:0,9,95	./.	./.	0/0:38,0:18:2.98:0,3,22	0/1:11,0:12:0.01:0,0,0	0/0:17,0:16:8.97:0,9,71	0/0:15,0:15:12.02:0,12,230	0/0:18,0:18:0:0,0,0	0/0:11,0:10:2.99:0,3,24	0/0:17,0:17:8.99:0,9,104	0/0:13,0:13:3:0,3,25	0/1:18,0:21:7.38:48,0,7	0/0:10,0:10:5.97:0,6,45	0/1:8,0:8:6.41:6,0,40	./.	0/1:8,0:8:6.08:6,0,41	0/1:8,2:9:31.92:65,0,32	0/1:14,1:15:24.20:65,0,24	1/1:16,0:15:2.98:22,3,0	0/0:14,0:13:3.01:0,3,49	0/1:28,0:28:0.44:0,0,172	0/0:19,0:19:15.02:0,15,209	./.	0/0:18,0:19:3.01:0,3,81	0/0:13,0:13:2.97:0,3,20	0/0:27,0:27:26.57:0,27,521	0/1:13,1:14:14.96:68,0,15	0/0:22,0:22:9.03:0,9,184
chr10	67826177	.	A	ATTT	5632.69	PASS	AB=1.000;AC=48;AF=0.857;AN=56;BaseQRankSum=7.171;DP=551;FS=10.753;HRun=12;HaplotypeScore=164.9172;InbreedingCoeff=0.6263;MQ=74.34;MQ0=0;MQRankSum=-1.886;QD=11.98;ReadPosRankSum=1.400;VQSLOD=1.6660;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:34:74.97:0,75,814	1/1:5,1:13:29.89:257,30,0	0/0:24,0:20:0.32:0,0,189	0/1:11,0:10:29.47:29,0,97	0/0:22,0:21:44.96:0,45,505	1/1:21,0:21:42.79:175,43,0	1/1:21,0:21:39.87:140,40,0	1/1:4,0:24:59.83:497,60,0	1/1:3,0:9:13.20:94,13,0	0/1:20,0:20:8.46:39,0,8	1/1:16,0:16:30.24:111,30,0	1/1:16,0:16:26.84:92,27,0	1/1:18,0:18:36.63:143,37,0	1/1:22,0:22:49.21:177,49,0	1/1:16,0:15:35.31:132,35,0	1/1:12,0:13:26.37:97,26,0	1/1:11,0:26:57.75:483,58,0	1/1:5,3:21:52.34:491,52,0	1/1:20,0:20:29.42:120,29,0	1/1:23,0:23:40.90:163,41,0	1/1:18,0:18:24.88:71,25,0	1/1:15,0:15:33.75:126,34,0	1/1:17,0:17:36.89:130,37,0	1/1:20,0:20:36.32:136,36,0	1/1:28,0:28:47.50:183,48,0	1/1:9,15:29:66.15:1040,66,0	1/1:15,0:14:30.96:134,31,0	1/1:9,6:17:36.10:572,36,0
chr10	67826181	.	T	TTG	14401.75	PASS	AB=1.000;AC=41;AF=0.732;AN=56;BaseQRankSum=5.067;DP=566;FS=0.000;HRun=0;HaplotypeScore=123.3222;InbreedingCoeff=0.3427;MQ=71.05;MQ0=0;MQRankSum=-3.007;QD=30.26;ReadPosRankSum=5.226;VQSLOD=6.4451;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:87.17:0,87,1203	0/1:12,0:12:58.99:73,0,59	0/0:22,0:17:32.06:0,32,352	0/0:12,0:10:8.32:0,8,175	0/0:24,0:23:63.10:0,63,825	1/1:2,19:21:60.19:969,60,0	1/1:0,23:23:54.18:895,54,0	0/1:25,0:25:50.65:203,0,51	0/1:9,0:9:43.90:44,0,57	1/1:4,16:20:8.78:727,9,0	1/1:2,16:18:45.03:686,45,0	1/1:6,11:18:42.01:612,42,0	1/1:4,13:18:51.07:763,51,0	1/1:1,20:21:60.19:993,60,0	1/1:2,15:16:45.07:712,45,0	1/1:1,11:12:35.99:562,36,0	0/1:26,0:26:82.08:207,0,82	0/1:21,0:21:18.12:183,0,18	1/1:7,15:22:60.12:895,60,0	1/1:3,24:27:68.97:981,69,0	1/1:3,15:18:45.03:687,45,0	1/1:6,13:20:54.09:790,54,0	1/1:0,17:17:48.16:795,48,0	1/1:6,13:20:57.04:835,57,0	1/1:5,26:31:69.17:1078,69,0	0/1:30,0:30:18.09:18,0,197	1/1:2,13:14:42.09:662,42,0	0/1:15,0:15:32.20:32,0,36
chr10	67826255	.	A	ATT	13728.25	PASS	AC=48;AF=0.857;AN=56;BaseQRankSum=-4.178;DP=561;FS=32.435;HRun=10;HaplotypeScore=86.4318;InbreedingCoeff=0.9632;MQ=63.88;MQ0=1;MQRankSum=-0.826;QD=28.72;ReadPosRankSum=2.227;VQSLOD=3.0475;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:81.09:0,81,823	1/1:4,10:15:32.60:456,33,0	0/0:13,0:12:30.53:0,31,304	0/0:10,0:10:24.02:0,24,240	0/0:22,0:22:48.05:0,48,480	1/1:8,15:25:59.15:783,59,0	1/1:4,13:17:39.11:561,39,0	1/1:6,17:24:27.82:738,28,0	1/1:0,11:11:27.09:402,27,0	1/1:6,14:23:47.07:598,47,0	1/1:8,10:18:33.11:491,33,0	1/1:4,16:21:41.63:590,42,0	1/1:2,0:17:39.68:139,40,0	1/1:7,12:19:51.15:732,51,0	1/1:1,13:14:45.14:639,45,0	1/1:8,10:19:47.65:674,48,0	1/1:1,15:17:39.13:581,39,0	1/1:4,15:20:50.14:672,50,0	1/1:3,14:18:50.13:669,50,0	1/1:7,15:26:64.67:852,65,0	1/1:4,10:13:36.04:470,36,0	1/1:5,0:18:4.81:83,5,0	1/1:6,1:22:39.19:170,39,0	1/1:2,1:19:40.93:191,41,0	1/1:8,20:31:77.21:1032,77,0	1/1:7,18:26:62.70:895,63,0	1/1:7,11:19:50.66:711,51,0	1/1:6,15:21:42.01:598,42,0
chr10	67827062	.	A	ATAT	8621.61	PASS	AB=0.938;AC=35;AF=0.625;AN=56;BaseQRankSum=-8.703;DP=399;FS=3.586;HRun=0;HaplotypeScore=51.7335;InbreedingCoeff=0.8095;MQ=64.02;MQ0=0;MQRankSum=0.002;QD=38.15;ReadPosRankSum=3.152;VQSLOD=5.3325;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:81.21:0,81,1217	0/0:7,0:7:21.03:0,21,310	0/0:3,0:2:2.99:0,3,23	0/0:3,0:3:5.99:0,6,55	0/0:26,0:26:78.21:0,78,1202	1/1:1,25:28:60.19:1293,60,0	1/1:1,15:16:27.09:621,27,0	0/0:29,0:29:84.22:0,84,1224	0/0:13,0:13:39.11:0,39,632	1/1:2,13:16:45.13:794,45,0	1/1:1,15:16:41.92:753,42,0	1/1:0,8:9:12.04:242,12,0	1/1:0,0:11:24.08:386,24,0	1/1:0,10:12:21.07:479,21,0	1/1:0,8:8:15.05:345,15,0	1/1:0,7:8:21.07:483,21,0	0/0:28,0:28:81.23:0,81,1263	0/0:20,0:20:60.07:0,60,884	1/1:1,10:12:7.24:577,7,0	1/1:0,15:15:35.97:649,36,0	1/1:3,10:13:15.03:299,15,0	1/1:1,0:1:2.92:17,3,0	1/1:2,1:6:7.77:72,8,0	1/1:0,0:5:6.02:95,6,0	1/1:1,16:18:32.23:800,32,0	0/1:14,1:15:25.72:26,0,591	1/1:0,15:17:30.10:689,30,0	0/0:15,0:15:24.98:0,25,635
chr10	67828007	.	C	CGACAGTAGTTT	71282.62	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-6.565;DP=712;FS=0.000;HRun=0;HaplotypeScore=191.5419;InbreedingCoeff=0.9778;MQ=75.31;MQ0=0;MQRankSum=-9.556;QD=107.68;ReadPosRankSum=4.041;VQSLOD=4.6180;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:23,16:43:87.09:3911,87,0	1/1:0,7:7:21.07:1169,21,0	0/0:22,0:22:42.08:0,42,1134	0/0:28,0:28:52.87:0,53,1703	1/1:16,20:36:71.61:2490,72,0	1/1:11,16:29:66.18:3512,66,0	1/1:14,16:30:72.16:3642,72,0	1/1:21,6:30:69.20:2798,69,0	1/1:11,13:24:63.18:3013,63,0	1/1:20,12:33:78.25:3801,78,0	1/1:12,9:21:51.04:2183,51,0	1/1:9,17:26:69.19:3516,69,0	1/1:15,18:34:81.23:4137,81,0	1/1:10,15:29:74.86:3299,75,0	1/1:9,10:19:45.07:2073,45,0	1/1:8,20:30:78.23:3973,78,0	1/1:11,13:28:54.19:2879,54,0	1/1:6,3:10:18.02:864,18,0	1/1:8,7:17:36.10:1495,36,0	1/1:13,11:24:56.99:2379,57,0	1/1:19,4:24:32.94:993,33,0	1/1:20,16:36:74.95:3805,75,0	1/1:11,10:22:50.95:2681,51,0	1/1:4,9:21:30.10:1640,30,0	1/1:8,8:16:39.07:1944,39,0	1/1:14,21:38:99:4938,102,0	1/1:7,19:29:66.23:3479,66,0	1/1:0,4:4:12.04:668,12,0
chr10	67829014	.	GA	G	4920.88	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=11.190;DP=680;FS=0.366;HRun=1;HaplotypeScore=66.2776;InbreedingCoeff=0.9935;MQ=95.23;MQ0=0;MQRankSum=-5.953;QD=39.05;ReadPosRankSum=0.177;VQSLOD=5.2647;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,148,2349	1/1:0,7:7:21.07:293,21,0	0/0:32,0:32:93.05:0,93,1441	0/0:33,0:33:96.77:0,97,1497	0/0:25,0:25:75.24:0,75,1168	0/0:24,0:24:69.23:0,69,1093	0/0:16,0:16:48.16:0,48,768	1/1:0,38:38:99:1570,114,0	1/1:0,12:12:33.11:462,33,0	0/0:26,0:26:78.27:0,78,1245	0/0:20,0:20:60.19:0,60,909	0/0:18,0:18:54.18:0,54,863	0/0:25,0:25:75.26:0,75,1199	0/0:20,0:20:60.17:0,60,912	0/0:32,0:32:96.32:0,96,1513	0/0:23,1:24:30.27:0,30,1036	1/1:0,22:22:60.20:839,60,0	1/1:0,13:13:36.12:502,36,0	0/0:30,0:30:87.29:0,87,1370	0/0:23,0:23:69.22:0,69,1071	0/0:37,0:37:99:0,111,1772	0/0:19,0:19:57.19:0,57,906	0/0:25,0:25:75.24:0,75,1176	0/0:25,0:25:75.26:0,75,1198	0/0:20,0:20:60.20:0,60,959	1/1:0,26:26:78.26:1088,78,0	0/0:31,0:31:93.30:0,93,1461	1/1:0,8:8:12.04:168,12,0
chr10	67829465	.	GACACACACAC	G	2851.58	PASS	AB=0.824;AC=26;AF=0.520;AN=50;BaseQRankSum=4.852;DP=551;FS=10.676;HRun=0;HaplotypeScore=166.0849;InbreedingCoeff=0.4351;MQ=53.52;MQ0=16;MQRankSum=-4.659;QD=9.20;ReadPosRankSum=-0.668;VQSLOD=2.0622;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:30:12.90:0,13,177	./.	./.	./.	0/0:17,0:19:2.99:0,3,24	1/1:10,1:12:9.46:197,9,0	0/1:20,6:26:46.83:119,0,47	0/0:16,0:16:0.89:0,1,2	0/0:9,0:16:13.75:0,14,151	1/1:27,1:30:16.82:251,17,0	0/0:14,3:17:0.47:0,0,1	1/1:22,10:32:17.69:479,18,0	0/1:10,1:15:8.46:173,0,8	1/1:11,5:15:12.04:246,12,0	1/1:19,6:28:24.08:552,24,0	1/1:11,1:13:9.02:188,9,0	1/1:16,0:20:5.82:139,6,0	0/1:18,0:19:0.86:64,0,1	0/0:13,0:12:0:0,0,0	0/0:7,0:7:3.01:0,3,83	1/1:38,0:38:1.14:5,1,0	0/0:13,0:15:5.70:0,6,119	0/0:15,0:16:12:0,12,170	0/0:34,0:35:23.67:0,24,395	1/1:11,6:16:3.48:39,3,0	0/1:13,5:18:31.90:135,0,32	1/1:11,5:16:12.51:304,13,0	1/1:2,1:7:6.01:118,6,0
chr10	67830013	.	G	GA	10542.21	PASS	AB=1.000;AC=35;AF=0.625;AN=56;BaseQRankSum=-12.390;DP=597;FS=2.883;HRun=8;HaplotypeScore=62.8943;InbreedingCoeff=0.9380;MQ=78.22;MQ0=0;MQRankSum=-2.472;QD=27.67;ReadPosRankSum=2.259;VQSLOD=5.5073;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:1,0:30:50.92:0,51,150	0/0:6,0:6:15:0,15,137	0/0:25,0:25:34.98:0,35,285	0/1:5,0:5:3.04:3,0,33	0/0:0,0:24:47.04:0,47,139	1/1:4,19:23:54.15:616,54,0	1/1:0,26:26:72.21:831,72,0	0/0:34,0:34:87:0,87,791	0/0:21,0:21:54.02:0,54,494	1/1:5,20:25:60.16:679,60,0	1/1:2,20:22:60.14:677,60,0	1/1:4,21:25:57.17:658,57,0	1/1:3,17:20:51.15:589,51,0	1/1:1,21:22:57.17:658,57,0	1/1:3,19:22:51.15:589,51,0	1/1:1,23:24:60.18:692,60,0	0/0:18,0:18:51.03:0,51,467	0/0:21,0:21:60.03:0,60,549	1/1:3,12:15:39.08:427,39,0	1/1:4,25:29:72.21:831,72,0	1/1:0,19:19:48.14:554,48,0	1/1:3,16:19:45.13:519,45,0	1/1:2,18:20:51.15:584,51,0	1/1:2,9:11:24.07:277,24,0	1/1:2,16:19:47.97:534,48,0	0/0:31,2:33:26.82:0,27,755	1/1:9,26:35:72.21:824,72,0	0/0:4,0:4:8.99:0,9,77
chr10	67830500	.	ATG	A	790.43	PASS	AB=1.000;AC=21;AF=0.420;AN=50;BaseQRankSum=2.761;DP=162;FS=56.294;HRun=0;HaplotypeScore=35.4765;InbreedingCoeff=0.3590;MQ=76.53;MQ0=3;MQRankSum=-0.011;QD=16.13;ReadPosRankSum=-0.534;VQSLOD=1.2965;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:7:18.06:0,18,333	0/0:3,0:3:9.03:0,9,172	0/0:9,0:6:13.86:0,14,247	0/0:15,0:5:9.07:0,9,118	0/0:7,0:7:21.06:0,21,389	./.	0/1:1,0:1:0:0,0,0	0/0:26,0:26:78.26:0,78,1511	0/0:4,0:4:5.95:0,6,111	0/1:2,0:2:13.51:14,0,21	0/1:4,0:4:29.74:30,0,38	1/1:2,0:2:5.95:42,6,0	1/1:0,6:6:15.05:245,15,0	0/1:5,0:5:33.95:48,0,34	0/1:6,0:6:44.65:45,0,54	./.	0/0:15,0:14:24.52:0,25,348	0/0:8,0:8:24.01:0,24,365	1/1:3,0:3:6.41:42,6,0	./.	1/1:1,0:1:2.98:21,3,0	1/1:0,3:3:9.03:147,9,0	1/1:0,2:2:6.02:98,6,0	1/1:0,2:2:6.02:98,6,0	0/1:7,0:7:2.12:102,0,2	0/0:3,0:3:9.03:0,9,183	0/1:5,0:5:27.21:27,0,28	0/0:9,0:9:22.32:0,22,392
chr10	67830503	.	GATATATATATATATAT	G	861.68	PASS	AC=6;AF=0.333;AN=18;BaseQRankSum=-1.444;DP=153;FS=1.848;HRun=0;HaplotypeScore=70.1328;MQ=76.54;MQ0=5;MQRankSum=-1.140;QD=17.95;ReadPosRankSum=-0.304;VQSLOD=1.3525;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:6:3.01:0,3,166	./.	0/0:10,0:6:2.74:0,3,12	0/0:19,0:5:0:0,0,0	./.	./.	./.	1/1:18,8:26:18.04:384,18,0	./.	./.	./.	./.	./.	./.	0/0:5,0:5:6.02:0,6,429	./.	1/1:8,6:14:12.04:438,12,0	1/1:6,1:7:3.01:132,3,0	./.	./.	./.	./.	./.	./.	./.	./.	0/0:3,0:3:3.01:0,3,212	0/0:9,0:9:12.04:0,12,565
chr10	67831086	.	T	TCACAC	2234.34	PASS	AB=0.819;AC=22;AF=0.393;AN=56;BaseQRankSum=10.215;DP=501;FS=12.554;HRun=0;HaplotypeScore=137.8257;InbreedingCoeff=-0.6439;MQ=62.10;MQ0=12;MQRankSum=-3.564;QD=6.14;ReadPosRankSum=-5.214;VQSLOD=-0.3867;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:24:4.14:0,4,571	0/1:4,3:12:69.61:85,0,70	0/0:17,0:11:27.08:0,27,350	0/0:24,0:13:35.40:0,35,478	0/0:8,0:16:30.10:0,30,447	0/1:13,0:14:6.28:6,0,231	0/1:14,0:19:21.93:22,0,372	0/0:24,0:21:12.54:0,13,710	0/1:14,3:21:27.20:27,0,206	0/1:13,0:20:99:229,0,231	0/1:11,0:20:4.19:4,0,262	0/1:10,0:10:50.81:103,0,51	0/1:14,0:14:99:299,0,149	0/1:14,0:14:42.42:42,0,194	0/1:11,0:23:23.84:24,0,335	0/1:12,0:20:24.62:25,0,334	0/1:10,4:17:99:149,0,139	0/1:28,0:28:99:393,0,388	0/1:14,0:14:99:126,0,181	0/1:4,0:11:66.64:71,0,67	0/1:23,0:22:97.78:98,0,310	0/1:4,0:10:39.90:40,0,101	0/1:10,0:10:41.75:42,0,119	0/0:17,0:30:10.30:0,10,459	0/1:6,0:18:68.46:68,0,104	0/1:22,0:21:99:455,0,255	0/1:7,0:16:55:55,0,150	0/1:6,0:6:26.41:26,0,146
chr10	67831248	.	AATT	A	3193.33	PASS	AB=1.000;AC=33;AF=0.635;AN=52;BaseQRankSum=-4.355;DP=255;FS=8.641;HRun=0;HaplotypeScore=57.0677;InbreedingCoeff=0.7288;MQ=56.31;MQ0=1;MQRankSum=1.331;QD=23.83;ReadPosRankSum=2.389;VQSLOD=2.6442;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:10:3.01:0,3,39	0/0:1,0:2:3.01:0,3,39	0/1:5,0:3:3.04:3,0,54	./.	0/0:4,0:4:6.01:0,6,61	1/1:2,7:9:24.08:340,24,0	1/1:4,1:5:3.01:43,3,0	0/0:27,0:30:81.04:0,81,1043	0/0:6,0:7:6.02:0,6,79	1/1:1,7:8:24.07:325,24,0	1/1:7,12:19:39.12:537,39,0	1/1:2,4:6:18.06:254,18,0	1/1:0,4:4:12.04:170,12,0	1/1:1,3:5:15.02:191,15,0	1/1:0,5:5:15.05:213,15,0	1/1:3,4:7:12.04:170,12,0	0/0:15,0:20:33.42:0,33,370	0/0:12,0:15:27.02:0,27,310	1/1:12,6:17:30.07:389,30,0	1/1:7,3:10:12.04:170,12,0	1/1:2,0:2:3.01:42,3,0	./.	1/1:3,5:8:15.05:213,15,0	1/1:1,1:2:3.01:43,3,0	1/1:7,3:10:9.03:128,9,0	0/0:7,0:9:9.03:0,9,116	1/1:8,3:11:12.02:151,12,0	0/0:13,0:17:29.86:0,30,301
chr10	67831279	.	CT	C	2415.34	PASS	AB=0.550;AC=33;AF=0.589;AN=56;BaseQRankSum=-4.518;DP=248;FS=3.121;HRun=10;HaplotypeScore=56.5487;InbreedingCoeff=0.7931;MQ=50.90;MQ0=5;MQRankSum=1.243;QD=17.01;ReadPosRankSum=1.514;VQSLOD=4.1654;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:5:3.01:0,3,33	0/0:2,0:3:8.69:0,9,49	0/0:7,0:2:3.01:0,3,33	0/0:4,0:3:2.96:0,3,19	0/0:11,1:12:30.04:0,30,316	1/1:2,11:13:23.98:208,24,0	1/1:1,5:6:11.99:104,12,0	0/0:12,0:20:19.89:0,20,100	0/0:1,0:4:8.52:0,9,42	0/1:2,9:11:3.19:204,0,3	1/1:0,17:17:38.96:338,39,0	1/1:2,8:10:20.17:181,20,0	1/1:0,6:6:14.99:130,15,0	1/1:2,3:5:8.98:78,9,0	1/1:1,5:6:17.98:153,18,0	1/1:3,5:7:11.97:104,12,0	0/0:6,0:18:37.20:0,37,197	0/0:4,0:10:23.02:0,23,138	1/1:4,11:13:29.98:260,30,0	1/1:2,4:6:8.99:77,9,0	1/1:0,2:2:6:52,6,0	1/1:0,4:4:12:104,12,0	1/1:1,9:10:11.96:104,12,0	1/1:0,6:6:18:156,18,0	1/1:1,9:10:26.98:234,27,0	0/0:1,0:5:14.49:0,14,95	1/1:2,5:7:14.98:130,15,0	0/0:8,0:10:15.73:0,16,87
chr10	67833521	.	T	TGCC	17308.51	PASS	AB=0.600;AC=51;AF=0.911;AN=56;BaseQRankSum=1.551;DP=308;FS=0.000;HRun=0;HaplotypeScore=191.6240;InbreedingCoeff=0.7681;MQ=92.66;MQ0=0;MQRankSum=-7.122;QD=64.34;ReadPosRankSum=6.688;VQSLOD=4.5486;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,7:11:24.08:530,24,0	1/1:0,7:7:18.06:439,18,0	0/0:19,0:19:13.58:0,14,507	0/0:18,0:19:24.06:0,24,417	0/1:1,4:6:0.76:206,0,1	1/1:1,8:9:23.88:580,24,0	1/1:0,13:13:39.13:948,39,0	1/1:1,1:3:6.02:126,6,0	1/1:1,7:8:21.07:510,21,0	1/1:0,8:8:24.08:584,24,0	1/1:0,8:8:8.73:407,9,0	1/1:0,15:15:45.15:1092,45,0	1/1:1,10:11:30.10:726,30,0	1/1:1,12:13:36.12:855,36,0	1/1:2,9:11:30.06:730,30,0	1/1:0,11:11:33.11:805,33,0	1/1:1,14:15:36.12:843,36,0	1/1:0,11:11:33.11:805,33,0	1/1:1,5:6:18.02:387,18,0	1/1:0,14:14:28.94:932,29,0	1/1:0,7:6:18.06:385,18,0	1/1:0,11:11:33.11:786,33,0	1/1:2,5:7:15.05:365,15,0	1/1:1,7:8:21.07:490,21,0	1/1:1,14:15:36.39:988,36,0	1/1:0,16:19:57.18:1315,57,0	1/1:4,12:17:48.08:1109,48,0	1/1:0,5:5:15.05:365,15,0
chr10	67833524	.	G	GTTCC	14738.48	PASS	AB=0.667;AC=51;AF=0.911;AN=56;BaseQRankSum=5.722;DP=303;FS=0.735;HRun=0;HaplotypeScore=203.4215;InbreedingCoeff=0.6899;MQ=89.53;MQ0=0;MQRankSum=-8.305;QD=54.99;ReadPosRankSum=7.880;VQSLOD=5.1054;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,7:10:9.03:453,9,0	1/1:0,6:7:18.06:393,18,0	0/0:18,0:17:15.18:0,15,367	0/0:17,0:17:9.09:0,9,286	1/1:2,4:6:12.04:228,12,0	1/1:1,8:9:24.08:515,24,0	1/1:0,13:13:39.13:829,39,0	0/1:2,2:4:2.62:125,0,3	1/1:1,7:8:9.75:443,10,0	1/1:0,8:8:24.08:534,24,0	1/1:0,8:8:21.07:384,21,0	1/1:0,15:15:45.15:972,45,0	1/1:0,10:10:30.10:647,30,0	1/1:0,11:12:36.12:758,36,0	1/1:2,9:11:27.09:585,27,0	1/1:1,10:11:22.78:647,23,0	1/1:2,11:13:29.85:625,30,0	1/1:0,11:11:33.11:728,33,0	1/1:2,5:7:15.03:336,15,0	1/1:0,14:14:42.06:775,42,0	1/1:0,6:6:15.04:269,15,0	1/1:0,11:11:33.11:691,33,0	1/1:3,5:8:4.45:238,4,0	1/1:1,7:8:21.07:420,21,0	1/1:3,13:17:28.96:854,29,0	1/1:3,17:20:46.02:1070,46,0	1/1:3,13:16:42.14:888,42,0	1/1:0,5:5:15.05:330,15,0
chr10	67833526	.	G	GATGGC	27308.30	PASS	AB=0.881;AC=53;AF=0.946;AN=56;BaseQRankSum=3.824;DP=424;FS=13.751;HRun=0;HaplotypeScore=260.3171;InbreedingCoeff=-0.0579;MQ=77.48;MQ0=0;MQRankSum=-6.946;QD=64.41;ReadPosRankSum=6.845;VQSLOD=4.2376;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,6:16:13.46:769,13,0	1/1:1,7:8:21.07:582,21,0	0/1:17,0:16:99:103,0,248	0/1:18,0:18:44.04:44,0,336	1/1:7,4:12:22.89:555,23,0	1/1:6,8:15:45.15:1173,45,0	1/1:13,13:26:75.26:1987,75,0	1/1:12,2:14:39.12:1013,39,0	1/1:4,7:11:30.10:802,30,0	1/1:5,8:13:36.12:907,36,0	1/1:4,8:12:30.09:694,30,0	1/1:7,15:22:66.23:1787,66,0	1/1:5,10:15:45.15:1229,45,0	1/1:6,12:18:54.19:1437,54,0	1/1:5,9:15:42.14:1158,42,0	1/1:6,10:16:48.16:1283,48,0	1/1:12,11:23:51.18:1298,51,0	1/1:4,11:14:45.15:1173,45,0	1/1:7,5:12:30.10:832,30,0	1/1:0,14:14:36.12:888,36,0	1/1:4,6:9:17.99:434,18,0	1/1:3,11:14:39.13:1034,39,0	0/1:4,5:9:13.63:423,0,14	1/1:3,7:10:27.05:638,27,0	1/1:7,14:21:60.21:1491,60,0	1/1:6,17:23:59.97:1549,60,0	1/1:6,13:20:60.21:1617,60,0	1/1:0,5:5:15.05:410,15,0
chr10	67835313	.	CA	C	21799.90	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-1.986;DP=683;FS=12.716;HRun=3;HaplotypeScore=78.4389;InbreedingCoeff=0.9953;MQ=80.90;MQ0=0;MQRankSum=-10.080;QD=34.06;ReadPosRankSum=6.009;VQSLOD=4.0684;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,42:42:99:1413,114,0	1/1:0,7:7:17.70:223,18,0	0/0:22,0:22:57.19:0,57,789	0/0:21,0:20:46.71:0,47,586	1/1:0,26:26:78.25:967,78,0	1/1:0,22:22:60.19:744,60,0	1/1:0,30:30:84.26:1042,84,0	1/1:3,20:23:60.19:743,60,0	1/1:0,24:24:72.23:893,72,0	1/1:2,29:31:90.28:1107,90,0	1/1:0,13:13:36.11:446,36,0	1/1:0,24:24:66.21:818,66,0	1/1:2,25:27:72.23:893,72,0	1/1:1,36:37:96.30:1190,96,0	1/1:1,27:28:75.24:930,75,0	1/1:0,27:27:78.25:967,78,0	1/1:0,23:23:63.20:781,63,0	1/1:1,23:24:60.19:744,60,0	1/1:0,20:20:60.17:731,60,0	1/1:1,20:21:63.20:778,63,0	1/1:0,28:28:72.23:893,72,0	1/1:3,21:24:66.19:805,66,0	1/1:0,22:22:60.06:744,60,0	1/1:0,30:30:78.25:967,78,0	1/1:1,12:13:36.11:446,36,0	1/1:0,27:27:78.21:940,78,0	1/1:1,34:35:93.12:1150,93,0	1/1:0,12:12:36.11:446,36,0
chr10	67837976	.	ACAAG	A	2762.50	PASS	AB=1.000;AC=12;AF=0.214;AN=56;BaseQRankSum=-9.694;DP=692;FS=0.418;HRun=0;HaplotypeScore=157.0725;InbreedingCoeff=0.6638;MQ=68.77;MQ0=2;MQRankSum=-0.238;QD=14.46;ReadPosRankSum=-0.745;VQSLOD=3.0597;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,112,2980	0/0:11,0:11:33.10:0,33,535	0/0:29,0:24:55.26:0,55,962	0/0:24,0:19:45.43:0,45,885	0/0:24,0:24:66.21:0,66,1610	0/0:19,0:19:22.13:0,22,747	0/0:19,0:19:41.84:0,42,645	0/0:32,0:32:44.15:0,44,993	0/0:24,0:24:60.21:0,60,1033	0/1:27,0:27:7.72:8,0,930	0/0:28,0:28:20.23:0,20,1003	0/0:20,0:20:30.19:0,30,855	1/1:8,20:28:45.15:770,45,0	0/0:28,0:28:29.25:0,29,1127	0/0:16,0:16:17.13:0,17,599	0/0:18,0:18:48.15:0,48,784	0/0:29,0:29:78.24:0,78,1288	0/1:17,0:17:0.85:1,0,495	0/1:31,0:31:0.94:1,0,871	0/0:23,0:23:14.22:0,14,906	0/1:26,0:26:9.39:9,0,811	1/1:2,24:26:63.09:988,63,0	1/1:0,19:19:38.88:642,39,0	1/1:4,13:17:30.10:508,30,0	0/0:20,0:20:16.86:0,17,650	0/0:37,0:37:18.41:0,18,1352	0/0:33,0:33:58.25:0,58,1290	0/0:18,0:18:51.13:0,51,830
chr10	67838699	.	CT	C	1551.68	PASS	AB=0.808;AC=13;AF=0.232;AN=56;BaseQRankSum=9.338;DP=647;FS=4.915;HRun=12;HaplotypeScore=73.2704;InbreedingCoeff=0.7308;MQ=73.76;MQ0=0;MQRankSum=-0.214;QD=7.80;ReadPosRankSum=1.777;VQSLOD=2.7134;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:43,6:50:19.39:19,0,877	1/1:2,7:9:11.93:93,12,0	0/0:17,0:14:16.09:0,16,199	0/1:23,1:21:15.21:15,0,78	0/0:21,2:23:36.88:0,37,545	0/0:20,0:20:51.07:0,51,501	0/0:16,0:17:38.91:0,39,380	1/1:14,10:26:33.31:228,33,0	0/0:14,1:15:9.83:0,10,276	0/0:26,0:26:54.07:0,54,535	0/0:15,0:15:30.06:0,30,304	0/0:26,0:27:50.50:0,51,590	0/0:21,0:23:54.77:0,55,512	0/0:18,0:18:36.07:0,36,366	0/0:19,1:20:30.86:0,31,489	0/0:24,2:26:36.86:0,37,545	1/1:1,18:19:50.80:395,51,0	0/1:7,19:29:0.97:329,0,1	0/0:18,1:19:15.84:0,16,342	0/0:28,3:32:16.47:0,16,506	0/0:20,0:21:44.91:0,45,430	0/0:33,0:33:69.11:0,69,684	0/0:18,1:19:27.87:0,28,459	0/0:20,1:21:39.81:0,40,555	0/0:18,0:19:41.92:0,42,410	1/1:6,23:29:43.31:485,43,0	0/0:32,4:36:20.42:0,20,727	1/1:4,7:12:22.94:168,23,0
chr10	67838992	.	AGT	A	661.46	PASS	AB=0.916;AC=20;AF=0.417;AN=48;BaseQRankSum=5.078;DP=523;FS=0.000;HRun=0;HaplotypeScore=67.5103;InbreedingCoeff=0.0449;MQ=63.53;MQ0=14;MQRankSum=-0.059;QD=2.38;ReadPosRankSum=2.684;VQSLOD=1.0089;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:33,2:34:26.38:26,0,38	0/1:3,2:5:29.52:56,0,30	./.	./.	1/1:20,1:22:11.86:110,12,0	0/1:20,1:22:28.52:29,0,120	0/0:15,0:15:24.06:0,24,333	0/0:36,0:34:6.03:0,6,28	0/0:10,0:15:11.98:0,12,99	0/0:22,0:22:6.23:0,6,51	0/1:16,1:17:23.38:23,0,79	0/1:10,1:11:23.43:23,0,180	1/1:10,2:12:2.50:31,3,0	0/0:10,0:9:9.03:0,9,130	0/1:11,1:12:20.37:20,0,102	0/0:17,0:17:21.07:0,21,310	0/1:19,1:19:20.35:20,0,121	0/0:27,0:25:15.49:0,15,175	1/1:18,2:19:6.01:65,6,0	0/1:18,1:19:20.37:20,0,121	./.	./.	1/1:14,2:17:14.87:142,15,0	1/1:14,10:26:21.05:227,21,0	0/1:13,1:15:23.39:23,0,62	0/0:21,0:20:12.03:0,12,161	0/1:24,1:25:5.34:5,0,307	0/0:7,0:8:12.01:0,12,137
chr10	67839284	.	GC	G	3075.25	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=8.774;DP=504;FS=2.010;HRun=2;HaplotypeScore=48.6484;InbreedingCoeff=0.9890;MQ=60.25;MQ0=4;MQRankSum=-1.167;QD=32.37;ReadPosRankSum=1.284;VQSLOD=3.3253;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:93.32:0,93,1393	1/1:1,4:5:12.04:156,12,0	0/0:22,0:14:36.12:0,36,524	0/0:21,0:13:26.25:0,26,421	0/0:17,0:17:51.16:0,51,742	0/0:18,0:18:54.18:0,54,809	0/0:24,0:24:72.22:0,72,1038	1/1:2,20:22:57.15:719,57,0	0/0:18,0:18:54.16:0,54,784	0/0:17,0:17:48.16:0,48,717	0/0:8,0:8:24.07:0,24,338	0/0:5,0:5:15.05:0,15,225	0/0:16,0:16:48.16:0,48,709	0/0:23,0:23:66.17:0,66,925	0/0:24,0:24:72.21:0,72,1054	0/0:22,0:22:66.21:0,66,968	1/1:0,20:20:57.19:739,57,0	1/1:2,22:24:34.31:714,34,0	0/0:16,0:16:48.15:0,48,701	0/0:9,0:9:27.09:0,27,404	0/0:27,0:27:78.25:0,78,1146	0/0:10,0:10:30.10:0,30,444	0/0:9,0:9:24.08:0,24,358	0/0:23,0:23:69.22:0,69,1009	0/0:15,0:15:45.13:0,45,652	1/1:0,14:14:42.14:544,42,0	0/0:33,0:33:93.23:0,93,1364	1/1:0,10:10:30.10:389,30,0
chr10	67839366	.	G	GA	1437.50	PASS	AB=0.917;AC=5;AF=0.089;AN=56;BaseQRankSum=-6.463;DP=628;FS=1.150;HRun=9;HaplotypeScore=73.6046;InbreedingCoeff=0.8362;MQ=67.96;MQ0=0;MQRankSum=0.535;QD=17.75;ReadPosRankSum=-0.207;VQSLOD=3.7291;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,25:35:72.19:793,72,0	0/0:6,0:6:18:0,18,156	0/0:16,0:15:26.97:0,27,231	0/0:14,0:12:19.90:0,20,198	1/1:8,27:35:70.07:765,70,0	0/0:21,0:21:53.99:0,54,468	0/0:23,0:23:59.48:0,59,504	0/0:37,0:37:95.70:0,96,816	0/0:24,1:25:35.81:0,36,540	0/0:28,0:28:74.97:0,75,646	0/0:16,0:17:47.03:0,47,397	0/0:22,0:22:59.99:0,60,521	0/0:13,0:13:38.99:0,39,339	0/0:26,0:26:71.96:0,72,621	0/0:25,0:25:65:0,65,549	0/0:27,0:27:71.98:0,72,625	0/0:26,0:26:74.94:0,75,644	0/0:22,0:22:53.98:0,54,468	0/0:26,0:26:71.98:0,72,625	0/0:15,0:15:44.99:0,45,390	0/0:24,0:24:62.97:0,63,543	0/0:18,0:18:47.90:0,48,417	0/0:14,0:14:35.99:0,36,312	0/0:33,0:33:95.96:0,96,829	0/0:14,0:14:32.98:0,33,286	0/0:30,0:30:74.98:0,75,651	0/0:24,0:25:65.01:0,65,553	0/1:10,1:11:3.22:3,0,197
chr10	67839499	.	T	TA	15870.23	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=-17.974;DP=669;FS=0.597;HRun=1;HaplotypeScore=57.1386;InbreedingCoeff=0.9998;MQ=82.70;MQ0=0;MQRankSum=-2.559;QD=41.65;ReadPosRankSum=3.846;VQSLOD=5.2050;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,29:30:75.25:1124,75,0	0/0:11,0:11:33.11:0,33,428	0/0:18,0:18:54.17:0,54,686	0/0:17,0:18:45.14:0,45,582	1/1:0,29:29:81.27:1208,81,0	1/1:0,29:29:81.27:1214,81,0	1/1:0,29:29:84.28:1259,84,0	0/0:36,0:36:96.27:0,96,1185	1/1:0,15:15:39.13:584,39,0	1/1:1,30:31:87.28:1267,87,0	1/1:0,24:24:69.23:1034,69,0	1/1:0,16:16:45.15:675,45,0	0/0:10,0:10:30.10:0,30,389	1/1:0,14:14:36.12:539,36,0	1/1:0,12:12:33.11:495,33,0	1/1:0,17:17:48.16:720,48,0	0/0:27,0:27:75.22:0,75,955	0/0:27,0:27:78.18:0,78,962	1/1:1,18:19:54.18:809,54,0	1/1:0,39:39:99:1708,114,0	1/1:0,22:22:60.20:899,60,0	0/0:31,0:31:90.29:0,90,1168	0/0:39,0:39:99:0,117,1507	0/0:18,0:18:54.18:0,54,701	1/1:1,21:22:57.19:854,57,0	0/0:36,0:36:99:0,108,1391	1/1:0,33:33:99:1482,99,0	0/0:17,0:17:51.08:0,51,639
chr10	67841223	.	C	CTGTGTG	3511.52	PASS	AB=1.000;AC=44;AF=0.957;AN=46;BaseQRankSum=-1.689;DP=552;FS=0.000;HRun=0;HaplotypeScore=148.4131;InbreedingCoeff=0.0224;MQ=64.08;MQ0=9;MQRankSum=0.289;QD=7.98;ReadPosRankSum=-0.411;VQSLOD=1.8910;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	1/1:7,0:7:3.01:50,3,0	./.	./.	1/1:30,0:30:17.99:233,18,0	1/1:23,0:22:8.99:85,9,0	0/1:20,0:19:27.09:85,0,27	1/1:22,0:20:5.93:49,6,0	1/1:18,0:18:12.04:267,12,0	1/1:26,0:26:20.53:263,21,0	./.	0/1:12,0:11:0:0,0,0	1/1:12,0:14:6.02:150,6,0	1/1:16,0:16:3:88,3,0	1/1:8,0:14:3.01:78,3,0	1/1:23,0:23:12.48:165,12,0	1/1:12,1:25:11.16:222,11,0	1/1:7,2:8:5.93:113,6,0	1/1:17,0:17:9.03:177,9,0	1/1:14,0:13:3.01:89,3,0	1/1:23,0:23:9.01:147,9,0	1/1:13,0:13:9.03:226,9,0	1/1:26,0:26:15:168,15,0	./.	1/1:20,0:21:5.65:91,6,0	1/1:29,0:29:31.28:349,31,0	1/1:28,0:27:24.55:370,25,0	1/1:9,0:9:5.98:47,6,0
chr10	67841386	.	A	ATTTG	24638.39	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-5.179;DP=554;FS=0.000;HRun=0;HaplotypeScore=64.7782;InbreedingCoeff=0.9658;MQ=68.21;MQ0=0;MQRankSum=-5.446;QD=46.31;ReadPosRankSum=3.774;VQSLOD=4.8505;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,27:28:66.14:1565,66,0	1/1:0,10:11:26.92:649,27,0	0/0:11,0:11:18.05:0,18,275	0/0:11,0:11:20.71:0,21,247	1/1:6,16:28:48.03:1042,48,0	1/1:5,18:22:39.13:982,39,0	1/1:5,9:15:18.06:456,18,0	1/1:5,29:38:99:2099,102,0	1/1:3,15:19:24.08:609,24,0	1/1:2,10:14:36.11:821,36,0	1/1:2,12:15:27.01:626,27,0	1/1:1,13:15:30.10:761,30,0	1/1:3,12:16:33.11:832,33,0	1/1:2,7:10:15.05:380,15,0	1/1:0,14:15:36.12:907,36,0	1/1:2,17:20:36.12:912,36,0	1/1:4,14:22:33.11:837,33,0	1/1:4,16:20:42.14:1059,42,0	1/1:4,15:21:51.10:1028,51,0	1/1:5,8:14:27.09:676,27,0	1/1:6,15:21:36.12:889,36,0	1/1:3,9:12:18.06:362,18,0	1/1:2,19:24:51.17:1230,51,0	1/1:2,15:17:30.10:762,30,0	1/1:4,27:34:60.21:1523,60,0	1/1:2,31:35:92.87:2116,93,0	1/1:7,24:32:45.15:1135,45,0	1/1:1,12:13:15.05:381,15,0
chr10	67841759	.	TTTGG	T	13685.84	PASS	AB=0.920;AC=33;AF=0.589;AN=56;BaseQRankSum=15.097;DP=591;FS=6.175;HRun=0;HaplotypeScore=104.3961;InbreedingCoeff=0.9227;MQ=88.82;MQ0=2;MQRankSum=-7.063;QD=39.44;ReadPosRankSum=2.752;VQSLOD=5.1649;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,33:37:75.17:1377,75,0	0/0:11,0:11:33.11:0,33,904	0/0:31,0:30:82.71:0,83,1906	0/0:18,0:18:45.12:0,45,977	1/1:1,15:16:18.06:349,18,0	1/1:1,13:14:33.11:621,33,0	1/1:1,32:33:75.21:1408,75,0	0/0:23,0:23:66.23:0,66,1783	1/1:0,17:17:45.15:872,45,0	1/1:0,17:17:45.13:792,45,0	1/1:4,10:14:21.07:385,21,0	1/1:2,26:27:72.25:1385,72,0	0/0:25,0:25:75.24:0,75,1974	1/1:1,29:30:81.28:1570,81,0	1/1:4,17:21:48.16:912,48,0	1/1:2,14:15:36.12:698,36,0	0/0:43,0:43:99:0,126,3324	0/0:26,0:26:78.27:0,78,2072	1/1:1,8:9:24.07:424,24,0	1/1:0,9:9:18.06:341,18,0	1/1:2,21:23:45.15:872,45,0	0/0:16,0:16:44.93:0,45,1204	0/0:10,0:10:24.08:0,24,624	0/0:29,0:29:87.30:0,87,2383	1/1:1,16:17:36.12:697,36,0	0/1:21,2:23:50.04:50,0,1451	1/1:5,18:23:48.16:930,48,0	0/0:12,0:12:36.12:0,36,974
chr10	67844162	.	CG	C	2403.60	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=8.938;DP=603;FS=6.208;HRun=3;HaplotypeScore=59.6143;InbreedingCoeff=0.9913;MQ=86.59;MQ0=0;MQRankSum=-2.792;QD=30.82;ReadPosRankSum=2.023;VQSLOD=3.4928;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:84.22:0,84,1129	0/0:7,0:7:21.06:0,21,285	0/0:21,0:21:63.12:0,63,814	0/0:22,0:22:55.69:0,56,715	0/0:6,0:6:18.05:0,18,241	0/0:21,0:21:63.17:0,63,851	0/0:25,0:25:75.25:0,75,1068	0/0:31,0:31:90.30:0,90,1276	0/0:21,0:21:63.17:0,63,867	0/0:10,0:10:27.08:0,27,372	0/0:12,0:12:36.12:0,36,518	0/0:26,0:26:78.24:0,78,1081	1/1:1,20:21:60.19:743,60,0	0/0:27,0:27:81.27:0,81,1164	0/0:31,0:31:93.28:0,93,1286	0/0:22,0:22:63.20:0,63,884	0/0:32,0:32:93.30:0,93,1319	0/0:35,0:35:99:0,99,1400	0/0:20,0:20:51.17:0,51,724	0/0:5,0:5:15.02:0,15,179	0/0:48,0:48:99:0,135,1914	1/1:0,9:9:27.08:334,27,0	1/1:0,15:15:36.11:446,36,0	1/1:2,31:33:84.26:1041,84,0	0/0:15,0:15:45.15:0,45,644	0/0:27,0:27:78.25:0,78,1102	0/0:23,0:23:69.23:0,69,990	0/0:9,0:9:27.09:0,27,385
chr10	67845049	.	C	CGGGGG	4294.10	PASS	AB=1.000;AC=49;AF=0.907;AN=54;BaseQRankSum=-2.390;DP=272;FS=3.777;HRun=12;HaplotypeScore=79.8308;InbreedingCoeff=0.3282;MQ=87.42;MQ0=0;MQRankSum=-5.058;QD=19.52;ReadPosRankSum=-0.394;VQSLOD=2.2903;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:12,0:12:19.61:349,20,0	1/1:4,0:4:3.01:54,3,0	0/0:26,0:24:2.81:0,3,127	0/0:25,0:21:11.67:0,12,200	1/1:5,0:5:3.01:42,3,0	1/1:7,0:7:3.01:73,3,0	1/1:19,0:19:25.12:477,25,0	1/1:9,0:9:5.89:83,6,0	1/1:3,0:7:3.01:68,3,0	1/1:11,0:11:15.05:382,15,0	1/1:9,0:9:14.89:158,15,0	1/1:15,0:15:18.06:397,18,0	1/1:8,0:8:9.03:214,9,0	1/1:12,1:13:9.03:216,9,0	1/1:11,0:11:15.05:327,15,0	1/1:8,0:8:3.01:71,3,0	1/1:9,0:9:12.04:257,12,0	1/1:7,0:7:3.01:64,3,0	1/1:8,0:8:6.02:143,6,0	1/1:5,0:5:2.96:19,3,0	1/1:10,0:10:2.94:19,3,0	1/1:3,0:3:8.99:100,9,0	0/1:3,0:3:0:0,0,0	1/1:5,0:5:9.03:218,9,0	1/1:13,0:13:6.02:104,6,0	1/1:3,0:3:2.98:22,3,0	1/1:16,0:16:20.90:439,21,0	./.
chr10	67847689	.	A	ACGTG	13822.84	PASS	AB=0.929;AC=47;AF=0.839;AN=56;BaseQRankSum=2.004;DP=642;FS=11.546;HRun=0;HaplotypeScore=201.7126;InbreedingCoeff=0.3731;MQ=57.91;MQ0=20;MQRankSum=-4.954;QD=24.73;ReadPosRankSum=-0.830;VQSLOD=3.5939;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:38,8:45:68.71:1468,69,0	1/1:7,0:9:25.86:192,26,0	0/0:44,0:21:56.34:0,56,978	0/0:39,0:15:36:0,36,565	1/1:14,8:22:23.94:430,24,0	1/1:13,4:17:38.99:663,39,0	1/1:25,3:26:17.36:350,17,0	1/1:22,0:24:41.11:452,41,0	1/1:13,3:14:30.01:549,30,0	1/1:18,7:25:70.79:1634,71,0	1/1:15,5:18:23.95:387,24,0	1/1:14,3:18:29.96:592,30,0	0/1:13,0:14:99:100,0,117	1/1:14,8:19:29.04:566,29,0	1/1:17,7:22:36.04:720,36,0	1/1:17,2:17:36:659,36,0	0/1:13,0:22:15.47:271,0,15	1/1:17,0:22:48.22:580,48,0	1/1:2,11:14:41.81:613,42,0	1/1:15,2:18:32.90:508,33,0	1/1:13,4:17:14.03:335,14,0	0/1:26,0:25:99:111,0,257	0/1:14,0:14:5.82:6,0,78	0/1:27,0:27:99:113,0,314	1/1:14,1:15:20.98:339,21,0	1/1:24,0:29:78.63:631,79,0	1/1:20,9:30:71.58:1318,72,0	1/1:8,0:12:35.22:238,35,0
chr10	67847701	.	G	GT	4509.77	PASS	AB=0.856;AC=38;AF=0.679;AN=56;BaseQRankSum=5.108;DP=667;FS=26.984;HRun=1;HaplotypeScore=161.5473;InbreedingCoeff=0.3483;MQ=46.05;MQ0=37;MQRankSum=-2.690;QD=8.62;ReadPosRankSum=-0.721;VQSLOD=0.5820;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:24,20:42:51.24:518,51,0	0/1:9,0:9:6.60:7,0,7	0/0:39,0:12:36.10:0,36,461	0/0:40,0:13:29.22:0,29,353	1/1:12,11:23:11.68:104,12,0	1/1:6,13:17:17.99:183,18,0	1/1:18,13:29:14.67:156,15,0	0/1:14,9:23:99:318,0,211	1/1:10,5:13:12.22:155,12,0	1/1:19,10:29:28.85:541,29,0	1/1:15,6:16:4.87:73,5,0	1/1:7,11:18:11.98:76,12,0	0/0:11,5:16:9.81:0,10,240	1/1:13,10:19:23.96:264,24,0	1/1:11,15:23:20.67:212,21,0	1/1:9,11:18:8.19:109,8,0	0/1:24,4:26:16.78:231,0,17	0/1:23,5:25:2.11:303,0,2	0/1:12,0:10:35.10:112,0,35	1/1:9,5:13:9.08:77,9,0	1/1:15,9:22:14.98:154,15,0	0/1:21,7:26:7.65:8,0,383	0/0:8,6:14:14.96:0,15,160	0/0:22,12:33:13.66:0,14,467	1/1:3,11:13:12:136,12,0	0/1:28,4:27:99:213,0,121	1/1:17,12:29:22.15:523,22,0	0/1:6,3:8:8.48:38,0,8
chr10	67848086	.	AACCAGGTGCACACACAGGGCCAGGTGCACACACAGG	A	5400.93	PASS	AB=0.922;AC=15;AF=0.268;AN=56;BaseQRankSum=13.131;DP=753;FS=8.586;HRun=0;HaplotypeScore=660.6474;InbreedingCoeff=0.5436;MQ=71.47;MQ0=1;MQRankSum=-0.930;QD=26.48;ReadPosRankSum=0.098;VQSLOD=-0.3748;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,126,1798	1/1:9,0:9:23.95:317,24,0	0/0:17,0:15:30.83:0,31,338	0/0:26,0:21:62.40:0,62,630	0/0:15,0:15:45.13:0,45,1206	0/0:15,0:15:44.78:0,45,1170	0/0:47,0:47:99:0,141,2799	1/1:24,0:24:72.11:858,72,0	0/0:30,0:30:90.21:0,90,2405	0/0:24,0:24:72.16:0,72,1633	0/0:18,0:18:42.11:0,42,1134	0/0:47,0:47:99:0,141,3645	0/1:20,0:20:99:206,0,127	0/0:44,0:44:99:0,132,3705	0/0:26,0:26:78.11:0,78,1891	0/0:25,0:25:75.17:0,75,2112	1/1:18,0:18:54.06:863,54,0	1/1:26,0:26:78.13:1481,78,0	0/0:24,0:23:66.07:0,66,1208	0/0:10,0:10:30:0,30,585	0/0:105,0:105:99:0,312,8203	0/1:15,0:15:57.07:57,0,177	0/1:18,0:18:99:176,0,293	0/1:39,0:39:99:255,0,664	0/0:18,0:18:54.09:0,54,1097	0/1:10,18:28:24.72:930,0,25	0/0:16,0:16:48.04:0,48,902	1/1:7,0:7:20.97:258,21,0
chr10	67849092	.	TC	T	18074.68	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-4.098;DP=705;FS=0.650;HRun=6;HaplotypeScore=74.2042;InbreedingCoeff=0.9951;MQ=85.33;MQ0=0;MQRankSum=-9.799;QD=27.39;ReadPosRankSum=6.109;VQSLOD=4.8465;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,48:51:99:1419,132,0	1/1:0,7:7:18.04:192,18,0	0/0:24,0:24:51.16:0,51,655	0/0:21,0:21:51.64:0,52,665	1/1:1,22:23:63.16:677,63,0	1/1:1,19:20:57.14:613,57,0	1/1:1,35:36:99:1096,102,0	1/1:9,20:29:60.13:637,60,0	1/1:0,16:16:45.11:484,45,0	1/1:2,38:40:99:1223,114,0	1/1:4,18:22:48.12:516,48,0	1/1:2,36:38:99:1064,99,0	1/1:2,30:32:84.21:903,84,0	1/1:3,24:27:57.14:613,57,0	1/1:3,24:27:69.17:742,69,0	1/1:1,15:16:42.11:452,42,0	1/1:2,27:29:75.19:806,75,0	1/1:2,17:19:42.11:451,42,0	1/1:1,23:24:69.17:739,69,0	1/1:2,12:14:33.08:355,33,0	1/1:1,32:33:90.23:967,90,0	1/1:0,25:25:57.14:613,57,0	1/1:2,16:18:39.10:419,39,0	1/1:0,24:24:66.17:709,66,0	1/1:4,10:14:27.07:290,27,0	1/1:2,27:29:81.20:871,81,0	1/1:3,25:28:69.14:742,69,0	1/1:4,15:19:45.11:484,45,0
chr10	67849468	.	GACGGCTCC	G	6683.50	PASS	AB=0.523;AC=11;AF=0.196;AN=56;BaseQRankSum=12.989;DP=639;FS=0.435;HRun=0;HaplotypeScore=169.7235;InbreedingCoeff=0.8393;MQ=79.17;MQ0=0;MQRankSum=-12.981;QD=74.26;ReadPosRankSum=-0.038;VQSLOD=4.8944;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,153,6414	1/1:0,7:7:15.02:405,15,0	0/0:13,0:13:36.12:0,36,1549	0/0:20,0:20:16.34:0,16,1473	0/0:28,0:28:78.27:0,78,3415	0/0:25,0:25:75.26:0,75,3300	0/0:32,0:32:96.18:0,96,4098	1/1:1,24:24:69.23:1958,69,0	0/0:23,0:23:69.18:0,69,2832	0/0:31,0:31:87.30:0,87,3892	0/0:25,0:25:74.99:0,75,3262	0/0:32,0:32:96.32:0,96,4135	0/0:20,0:20:57.20:0,57,2577	0/0:23,0:23:66.23:0,66,2952	0/0:25,0:25:75.26:0,75,3323	0/0:21,0:21:63.22:0,63,2803	1/1:1,16:18:48.16:1374,48,0	1/1:1,15:16:42.14:1229,42,0	0/0:18,0:18:54.14:0,54,2325	0/0:18,0:18:54.19:0,54,2445	0/0:26,0:26:78.27:0,78,3506	0/0:22,0:22:60.18:0,60,2488	0/0:15,0:15:42.14:0,42,1772	0/0:36,0:36:99:0,108,4796	0/0:17,0:17:48.16:0,48,2153	0/1:2,21:23:72.36:1629,0,72	0/0:28,0:28:84.29:0,84,3803	1/1:0,1:1:3.01:88,3,0
chr10	67850598	.	TCCCGA	T	1311.76	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.974;DP=740;FS=0.802;HRun=0;HaplotypeScore=133.6211;InbreedingCoeff=0.9978;MQ=83.49;MQ0=0;MQRankSum=-3.354;QD=52.47;ReadPosRankSum=1.723;VQSLOD=3.7643;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,111,3416	0/0:8,0:8:24.08:0,24,751	0/0:27,0:27:66.22:0,66,1904	0/0:22,0:22:60.21:0,60,1728	0/0:23,0:23:60.21:0,60,1785	0/0:20,0:20:57.20:0,57,1781	0/0:22,0:22:60.21:0,60,1877	0/0:32,0:32:87.26:0,87,2590	1/1:3,22:25:66.23:1407,66,0	0/0:22,0:22:60.21:0,60,1872	0/0:17,0:17:42.14:0,42,1308	0/0:27,0:27:78.27:0,78,2349	0/0:25,0:25:69.24:0,69,2139	0/0:38,0:38:99:0,114,3457	0/0:33,0:32:99:0,99,3042	0/0:22,0:21:63.22:0,63,1958	0/0:47,0:47:99:0,135,3867	0/0:27,0:27:81.28:0,81,2537	0/0:18,0:18:51.12:0,51,1435	0/0:25,0:25:66.23:0,66,2057	0/0:39,0:39:99:0,102,3100	0/0:23,0:23:69.24:0,69,2147	0/0:26,0:26:66.23:0,66,1999	0/0:40,0:40:99:0,117,3664	0/0:38,0:38:99:0,105,3264	0/0:25,0:25:72.25:0,72,2254	0/0:16,0:16:42.13:0,42,1236	0/0:13,0:13:35.85:0,36,1116
chr10	67852071	.	A	AC	17110.52	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-4.572;DP=515;FS=2.312;HRun=2;HaplotypeScore=78.5557;InbreedingCoeff=0.9538;MQ=76.12;MQ0=0;MQRankSum=-9.129;QD=35.80;ReadPosRankSum=3.749;VQSLOD=5.5155;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:9,22:31:72.18:983,72,0	1/1:0,6:6:15.05:216,15,0	0/0:18,0:17:44.14:0,44,503	0/0:19,0:19:54.15:0,54,651	1/1:6,8:14:27.08:359,27,0	1/1:0,14:15:39.13:561,39,0	1/1:1,37:38:99:1466,102,0	1/1:1,16:17:42.14:597,42,0	1/1:3,25:28:81.20:1103,81,0	1/1:2,15:17:42.07:597,42,0	1/1:1,6:7:9.03:130,9,0	1/1:1,25:26:63.21:907,63,0	1/1:3,26:29:78.22:1097,78,0	1/1:0,11:11:27.09:389,27,0	1/1:2,15:17:39.13:562,39,0	1/1:2,20:22:57.19:820,57,0	1/1:5,19:23:57.66:821,58,0	1/1:0,23:23:66.22:949,66,0	1/1:1,16:17:48.13:644,48,0	1/1:1,12:13:33.11:475,33,0	1/1:3,26:29:69.23:989,69,0	1/1:2,17:19:54.17:757,54,0	1/1:1,7:9:18.01:234,18,0	1/1:3,13:16:45.11:624,45,0	1/1:1,13:14:33.11:474,33,0	1/1:0,10:10:30.08:407,30,0	1/1:0,19:19:48.16:691,48,0	1/1:1,6:7:18.06:259,18,0
chr10	67852082	.	TCC	T	2128.42	PASS	AB=0.917;AC=11;AF=0.196;AN=56;BaseQRankSum=6.231;DP=496;FS=33.434;HRun=11;HaplotypeScore=129.4474;InbreedingCoeff=0.8100;MQ=72.42;MQ0=0;MQRankSum=-9.571;QD=17.74;ReadPosRankSum=3.494;VQSLOD=0.2176;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:27:36.39:0,36,126	0/0:5,0:5:14.92:0,15,158	0/0:19,0:17:7.31:0,7,301	0/0:16,0:16:21:0,21,248	0/0:4,0:12:9.94:0,10,64	0/0:15,0:15:24.04:0,24,307	0/0:32,0:40:77.08:0,77,888	0/1:20,1:21:11.35:11,0,183	1/1:5,20:26:48.01:566,48,0	0/0:15,0:15:13.72:0,14,126	0/0:9,0:9:15.04:0,15,210	0/0:22,1:26:15.17:0,15,485	1/1:3,27:30:75.14:786,75,0	0/0:15,0:16:26.57:0,27,364	0/0:14,0:14:30.09:0,30,438	0/0:17,0:20:50.12:0,50,666	0/0:17,1:17:7.37:0,7,498	0/0:20,0:21:51.08:0,51,673	0/0:15,0:15:20.88:0,21,175	0/0:14,0:15:20.57:0,21,279	0/0:33,0:33:51.07:0,51,646	1/1:4,14:18:39.06:414,39,0	1/1:1,7:8:20.92:177,21,0	1/1:5,11:16:33.06:351,33,0	0/0:11,0:12:21.06:0,21,290	0/0:4,0:6:14.02:0,14,156	0/0:16,0:18:20.29:0,20,288	0/0:3,0:3:6.02:0,6,92
chr10	67852346	.	CA	C	785.36	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.308;DP=737;FS=1.780;HRun=1;HaplotypeScore=77.2176;InbreedingCoeff=0.9843;MQ=87.95;MQ0=0;MQRankSum=-1.394;QD=34.15;ReadPosRankSum=1.222;VQSLOD=3.5535;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,144,2302	0/0:12,0:12:36.12:0,36,576	0/0:28,0:28:84.28:0,84,1315	0/0:25,0:25:74.26:0,74,1078	0/0:24,0:24:69.22:0,69,1079	0/0:29,0:29:87.28:0,87,1368	0/0:39,0:39:99:0,117,1868	0/0:31,0:31:90.29:0,90,1397	1/1:0,23:23:63.21:880,63,0	0/0:22,0:22:66.23:0,66,1056	0/0:19,0:19:54.18:0,54,863	0/0:41,0:41:99:0,123,1938	0/0:21,0:21:63.21:0,63,1007	0/0:24,0:24:72.25:0,72,1149	0/0:31,0:31:93.30:0,93,1461	0/0:24,0:24:72.22:0,72,1107	0/0:35,0:35:99:0,102,1580	0/0:22,0:22:66.23:0,66,1055	0/0:14,0:14:42.14:0,42,672	0/0:20,0:20:57.15:0,57,842	0/0:49,0:49:99:0,148,2344	0/0:22,0:22:63.21:0,63,1004	0/0:22,0:22:66.23:0,66,1055	0/0:36,0:36:99:0,108,1727	0/0:17,0:17:51.17:0,51,814	0/0:30,0:30:90.31:0,90,1440	0/0:22,0:22:60.20:0,60,954	0/0:5,0:5:15.05:0,15,240
chr10	67853240	.	GCAACAGCAA	G	3208.80	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=10.758;DP=631;FS=2.624;HRun=0;HaplotypeScore=207.4144;InbreedingCoeff=0.9698;MQ=65.74;MQ0=2;MQRankSum=-8.843;QD=34.50;ReadPosRankSum=0.279;VQSLOD=3.2784;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:72.23:0,72,2467	1/1:1,9:10:12.04:304,12,0	0/0:22,0:18:44.96:0,45,1450	0/0:17,0:15:30.10:0,30,1130	0/0:17,0:17:45.04:0,45,1381	0/0:9,0:9:18.06:0,18,670	0/0:31,0:31:78.27:0,78,3023	1/1:6,20:26:57.07:1064,57,0	0/0:21,0:21:60.21:0,60,2405	0/0:16,0:16:36.12:0,36,1324	0/0:15,0:15:33.10:0,33,1132	0/0:28,0:28:78.27:0,78,2929	0/0:30,0:30:81.28:0,81,3329	0/0:28,0:28:81.28:0,81,3524	0/0:34,0:34:93.32:0,93,4211	0/0:36,0:36:99:0,102,4236	1/1:7,30:37:45.11:1110,45,0	1/1:5,15:20:30.10:888,30,0	0/0:14,0:14:30.02:0,30,843	0/0:10,0:10:21.07:0,21,726	0/0:52,0:52:99:0,132,5167	0/0:12,0:12:27.09:0,27,1059	0/0:7,0:7:12.04:0,12,310	0/0:44,0:44:99:0,123,5291	0/0:19,0:19:48.16:0,48,1701	0/0:9,0:9:24.08:0,24,734	0/0:32,0:32:84.29:0,84,3460	0/0:4,0:4:12.04:0,12,559
chr10	67853646	.	A	AAAAAAAC	7524.46	PASS	AB=0.942;AC=14;AF=0.250;AN=56;BaseQRankSum=6.763;DP=601;FS=2.745;HRun=0;HaplotypeScore=144.4950;InbreedingCoeff=0.4231;MQ=69.25;MQ0=2;MQRankSum=-11.208;QD=35.00;ReadPosRankSum=-2.494;VQSLOD=4.2256;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:48.15:0,48,1067	1/1:4,9:14:30.57:981,31,0	0/1:22,0:12:5.20:5,0,317	0/0:31,0:23:10.66:0,11,376	0/0:33,0:33:87.23:0,87,1696	0/0:23,0:23:66.20:0,66,1387	0/0:13,0:13:33.07:0,33,516	1/1:11,19:32:93.15:1818,93,0	0/1:8,0:14:99:528,0,106	0/0:27,0:27:69.19:0,69,1319	0/0:37,0:37:99:0,108,2147	0/0:15,0:15:39.13:0,39,859	0/1:31,0:31:99:899,0,192	0/0:14,0:14:33.10:0,33,706	0/0:17,0:17:45.13:0,45,909	0/0:19,0:19:51.13:0,51,897	1/1:3,19:24:36.12:1377,36,0	1/1:3,13:16:18.06:609,18,0	0/0:21,0:20:54.14:0,54,1014	0/0:23,0:23:60.17:0,60,1207	0/0:9,0:9:27.09:0,27,584	0/1:26,0:26:99:484,0,245	0/1:20,0:21:99:466,0,125	0/1:14,0:14:88.97:358,0,89	0/0:19,0:19:54.15:0,54,1162	0/0:30,0:30:87.26:0,87,1820	0/0:30,0:30:90.24:0,90,1763	0/0:5,0:5:6.01:0,6,88
chr10	67853665	.	A	AAAAAC	5045.22	PASS	AB=0.973;AC=13;AF=0.232;AN=56;BaseQRankSum=11.554;DP=559;FS=0.836;HRun=0;HaplotypeScore=119.2424;InbreedingCoeff=0.3031;MQ=64.71;MQ0=3;MQRankSum=-9.635;QD=30.39;ReadPosRankSum=0.238;VQSLOD=4.7804;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:66.20:0,66,1146	0/1:13,0:13:99:243,0,147	0/0:19,0:11:4.38:0,4,228	0/0:29,0:21:10.13:0,10,351	0/0:30,0:30:84.28:0,84,1531	0/0:23,0:23:66.18:0,66,1232	0/0:10,0:10:27.07:0,27,418	0/1:26,0:25:99:334,0,435	0/1:13,0:13:99:270,0,172	0/0:24,0:23:69.22:0,69,1210	0/0:35,0:35:99:0,102,1840	0/0:18,0:18:45.13:0,45,781	1/1:17,12:29:70.33:1352,70,0	0/0:12,0:12:36.12:0,36,654	0/0:15,0:15:42.13:0,42,780	0/0:15,0:15:42.08:0,42,707	0/1:19,0:19:99:420,0,101	0/1:15,0:15:99:181,0,182	0/0:22,0:21:60.17:0,60,996	0/0:20,0:20:51.17:0,51,992	0/0:9,0:9:27.06:0,27,493	1/1:8,12:20:49.41:1121,49,0	1/1:5,9:14:35.23:781,35,0	0/1:10,3:13:6.33:328,0,6	0/0:24,0:24:69.18:0,69,1193	0/0:31,0:31:41.66:0,42,1172	0/0:35,0:35:90.30:0,90,1672	0/1:4,0:4:16.93:17,0,30
chr10	67853672	.	AC	A	2633.42	PASS	AB=1.000;AC=16;AF=0.286;AN=56;BaseQRankSum=9.265;DP=552;FS=19.013;HRun=4;HaplotypeScore=84.4469;InbreedingCoeff=0.6477;MQ=64.51;MQ0=2;MQRankSum=-4.060;QD=14.96;ReadPosRankSum=-0.500;VQSLOD=1.9912;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:72.20:0,72,939	0/1:12,0:12:8.36:8,0,106	0/0:16,0:11:14.10:0,14,195	0/0:22,0:18:13.46:0,13,261	0/0:32,0:32:96.24:0,96,1215	0/0:22,0:22:63.20:0,63,838	0/0:12,0:12:36.05:0,36,409	0/1:23,0:23:88.96:89,0,132	0/1:12,0:12:15.84:16,0,43	0/0:29,0:28:84.20:0,84,1045	0/0:32,0:32:90.29:0,90,1195	0/0:16,0:16:48.13:0,48,606	1/1:16,9:25:67.79:524,68,0	0/0:13,0:13:33.08:0,33,413	0/0:19,0:19:57.13:0,57,695	0/0:14,0:14:35.16:0,35,505	0/0:18,0:18:17.23:0,17,152	0/1:16,0:16:46.88:47,0,81	0/0:22,0:21:60.16:0,60,766	0/0:22,0:22:57.12:0,57,691	0/0:9,0:9:27.07:0,27,342	1/1:13,6:19:50.54:345,51,0	1/1:13,3:16:36.82:249,37,0	1/1:7,6:13:29.21:275,29,0	0/0:23,0:23:69.20:0,69,914	1/1:2,34:36:99:1131,105,0	0/0:31,0:31:93.30:0,93,1242	1/1:0,4:4:12.04:143,12,0
chr10	67854270	.	AGTGTGTGTGT	A	3627.13	PASS	AB=0.852;AC=17;AF=0.315;AN=54;BaseQRankSum=-3.291;DP=652;FS=6.162;HRun=0;HaplotypeScore=179.5592;InbreedingCoeff=0.7165;MQ=71.72;MQ0=17;MQRankSum=0.098;QD=16.87;ReadPosRankSum=3.537;VQSLOD=2.3078;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:44:20.83:0,21,192	1/1:7,0:7:5.87:36,6,0	0/0:47,0:27:43.40:0,43,493	0/0:43,0:26:25.32:0,25,303	./.	0/0:20,0:20:17.62:0,18,129	0/0:33,0:32:46.91:0,47,287	1/1:24,0:24:53.17:716,53,0	1/1:15,2:17:36.04:512,36,0	0/0:22,0:20:26.43:0,26,169	0/0:14,0:14:11.99:0,12,100	0/0:25,0:25:20.42:0,20,184	1/1:29,0:28:62.85:739,63,0	0/0:21,0:21:33.09:0,33,215	0/0:20,0:20:24.85:0,25,189	0/0:24,0:24:14.69:0,15,151	1/1:33,0:32:27.61:667,28,0	0/1:32,0:31:16.02:43,0,16	0/0:15,0:14:14.58:0,15,93	0/1:15,0:15:17.96:20,0,18	0/0:41,0:40:41.94:0,42,373	1/1:4,16:20:9.03:266,9,0	0/1:2,8:10:0:0,0,0	1/1:26,2:28:44.59:629,45,0	0/0:18,0:17:23.82:0,24,193	0/0:8,0:16:8.23:0,8,88	0/0:13,0:13:11.58:0,12,83	0/0:10,0:9:2.17:0,2,29
chr10	67854286	.	TGTGTGTGA	T	4092.25	PASS	AB=0.997;AC=40;AF=0.769;AN=52;BaseQRankSum=3.685;DP=639;FS=2.084;HRun=0;HaplotypeScore=148.8088;InbreedingCoeff=-0.2503;MQ=54.43;MQ0=26;MQRankSum=4.813;QD=6.71;ReadPosRankSum=4.202;VQSLOD=1.8593;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:42,0:40:18.84:19,0,25	1/1:7,0:7:3.01:31,3,0	0/1:34,0:15:11.44:11,0,50	0/1:28,0:12:55.36:59,0,55	./.	1/1:28,0:28:8.94:71,9,0	1/1:35,0:34:30.31:341,30,0	0/1:24,0:24:42.14:239,0,42	1/1:12,0:12:20.89:227,21,0	0/1:22,0:20:0.76:205,0,1	./.	0/1:27,0:27:13.94:55,0,14	1/1:24,0:23:39.48:312,39,0	1/1:21,0:21:31.58:276,32,0	0/1:25,0:25:9.49:107,0,9	0/1:22,0:22:21.28:21,0,37	1/1:28,0:27:54.55:446,55,0	0/1:34,0:32:32.37:34,0,32	1/1:15,0:13:14.05:162,14,0	1/1:5,11:15:3.01:81,3,0	1/1:52,0:49:50.32:496,50,0	1/1:17,0:17:9.03:173,9,0	0/1:9,0:9:0.12:0,0,0	1/1:24,0:23:32.27:267,32,0	0/1:21,0:20:16.33:124,0,16	0/1:19,0:18:18.96:180,0,19	1/1:10,0:10:3.01:32,3,0	1/1:13,0:9:2.51:124,3,0
chr10	67854288	.	TGTGTGA	T	5092.48	PASS	AB=0.746;AC=42;AF=0.808;AN=52;BaseQRankSum=4.475;DP=633;FS=0.670;HRun=0;HaplotypeScore=132.6357;InbreedingCoeff=-0.2612;MQ=54.30;MQ0=26;MQRankSum=4.946;QD=8.42;ReadPosRankSum=3.891;VQSLOD=3.6011;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:14,27:39:25.02:56,0,25	1/1:0,7:7:2.77:68,3,0	0/1:32,0:13:10.62:11,0,51	0/1:28,0:12:56.15:59,0,56	./.	1/1:9,18:27:9.03:183,9,0	1/1:35,0:34:37.72:418,38,0	0/1:24,0:24:42.56:239,0,43	1/1:16,0:16:23.89:223,24,0	0/1:6,15:19:0.93:243,0,1	./.	0/1:5,22:27:12.96:161,0,13	1/1:23,0:22:39.33:312,39,0	1/1:20,0:20:44.40:311,44,0	0/1:9,14:23:10.26:257,0,10	0/1:4,17:21:36.83:59,0,37	1/1:29,0:28:67.70:531,68,0	0/1:6,28:32:32.04:75,0,32	1/1:16,0:14:16.69:188,17,0	1/1:16,0:15:3.01:50,3,0	1/1:52,0:49:80.21:605,80,0	1/1:17,0:17:9.03:131,9,0	1/1:10,0:10:2.55:24,3,0	1/1:24,0:23:32.52:267,33,0	1/1:21,0:20:4.88:221,5,0	0/1:18,0:17:2.95:206,0,3	1/1:1,9:10:3.01:69,3,0	1/1:13,0:9:2.81:124,3,0
chr10	67854292	.	TGA	T	4421.11	PASS	AB=1.000;AC=42;AF=0.808;AN=52;BaseQRankSum=4.116;DP=623;FS=0.000;HRun=0;HaplotypeScore=112.8223;InbreedingCoeff=-0.2409;MQ=53.51;MQ0=26;MQRankSum=5.914;QD=7.41;ReadPosRankSum=3.078;VQSLOD=3.9381;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:38,0:36:12.60:13,0,25	1/1:7,0:7:2.72:23,3,0	0/1:27,0:9:8.92:9,0,53	0/1:27,0:12:57.92:58,0,58	./.	1/1:25,0:25:8.91:61,9,0	1/1:33,0:32:40.64:397,41,0	0/1:26,0:24:49.60:254,0,50	1/1:16,0:16:26.66:191,27,0	0/1:21,0:19:7.86:219,0,8	./.	0/1:26,0:26:13.06:52,0,13	1/1:26,0:25:45.14:354,45,0	1/1:20,0:20:50.39:360,50,0	0/1:22,0:22:10.03:79,0,10	0/1:22,0:22:14.65:15,0,37	1/1:28,0:27:68.31:539,68,0	0/1:35,0:33:29.67:30,0,32	1/1:6,9:13:13.87:184,14,0	1/1:15,0:14:2.98:22,3,0	1/1:49,0:46:80.39:605,80,0	1/1:19,0:19:8.71:48,9,0	1/1:12,0:12:8.57:73,9,0	1/1:26,0:25:35.49:292,35,0	1/1:20,0:19:4.86:177,5,0	0/1:19,0:18:2.76:219,0,3	1/1:9,0:9:2.99:24,3,0	1/1:14,0:10:2.47:124,2,0
chr10	67854294	.	AGTGTGTGTGT	A	690.62	PASS	AB=0.986;AC=13;AF=0.260;AN=50;BaseQRankSum=0.231;DP=615;FS=17.235;HRun=0;HaplotypeScore=170.3115;InbreedingCoeff=0.2731;MQ=53.05;MQ0=26;MQRankSum=1.586;QD=3.49;ReadPosRankSum=-2.378;VQSLOD=0.8631;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:38:2.37:0,2,8	0/0:7,0:7:2.21:0,2,10	./.	./.	./.	0/0:25,0:25:7.57:0,8,34	0/0:32,0:31:4.81:0,5,49	0/0:24,0:22:21.86:0,22,221	1/1:13,0:15:0.34:122,0,0	0/0:21,0:19:7.02:0,7,73	0/0:15,0:14:2.96:0,3,19	0/0:26,0:26:6.36:0,6,33	1/1:26,0:25:9.03:134,9,0	0/1:20,0:20:9.91:10,0,63	0/0:21,0:21:6.10:0,6,18	0/0:21,0:21:1.82:0,2,5	0/0:29,0:28:20.44:0,20,189	0/0:34,0:32:13.50:0,13,117	0/1:15,0:13:9.13:33,0,9	0/1:15,0:14:12.12:47,0,12	0/1:48,0:45:72.99:73,0,93	1/1:16,3:19:9.03:254,9,0	0/1:12,1:13:1.95:124,0,2	1/1:25,2:26:6.53:35,7,0	0/0:18,0:17:14.89:0,15,153	0/0:19,0:18:23.26:0,23,239	0/0:9,0:9:1.25:0,1,3	0/0:14,0:10:12.02:0,12,138
chr10	67854683	.	A	AG	2381.88	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-7.392;DP=636;FS=2.171;HRun=6;HaplotypeScore=67.5386;InbreedingCoeff=0.9957;MQ=81.85;MQ0=0;MQRankSum=-1.518;QD=25.61;ReadPosRankSum=1.855;VQSLOD=3.8538;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,147,1490	0/0:9,0:9:21.04:0,21,214	0/0:20,0:20:45.08:0,45,452	0/0:23,0:24:22.44:0,22,520	0/0:20,0:20:51.10:0,51,513	0/0:15,0:15:45.10:0,45,458	0/0:27,0:27:60.08:0,60,595	0/0:21,0:21:51.11:0,51,520	0/0:23,0:23:57.09:0,57,567	0/0:27,0:27:69.15:0,69,699	0/0:14,0:14:36.04:0,36,356	0/0:31,0:31:87.17:0,87,874	1/1:4,25:29:57.18:717,57,0	0/0:28,0:28:78.17:0,78,795	0/0:32,0:32:87.19:0,87,888	0/0:23,0:23:66.13:0,66,667	0/0:38,0:38:99:0,99,1001	0/0:16,0:16:48.04:0,48,469	0/0:14,0:14:42.10:0,42,428	0/0:15,0:15:36.08:0,36,367	0/0:20,0:20:54.12:0,54,551	1/1:3,21:24:48.15:602,48,0	1/1:2,17:19:41.73:521,42,0	1/1:2,19:21:57.16:702,57,0	0/0:21,0:21:60.12:0,60,606	0/0:22,0:22:60.13:0,60,612	0/0:24,0:24:60.05:0,60,587	0/0:6,0:6:18.04:0,18,184
chr10	67855717	.	TTG	T	2383.35	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=10.054;DP=737;FS=3.117;HRun=0;HaplotypeScore=85.2317;InbreedingCoeff=0.9999;MQ=84.24;MQ0=1;MQRankSum=-4.100;QD=38.44;ReadPosRankSum=3.026;VQSLOD=5.5251;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:81.28:0,81,1562	0/0:13,0:13:36.12:0,36,695	0/0:23,0:23:63.21:0,63,1178	0/0:24,0:24:69.24:0,69,1327	0/0:31,0:31:90.31:0,90,1737	0/0:24,0:24:72.23:0,72,1357	0/0:18,0:18:51.17:0,51,970	0/0:40,0:40:99:0,117,2182	0/0:26,0:26:78.27:0,78,1494	0/0:26,0:26:75.26:0,75,1437	0/0:18,0:18:48.14:0,48,890	0/0:26,0:26:78.22:0,78,1397	0/0:38,0:38:99:0,114,2165	0/0:20,0:20:60.21:0,60,1159	0/0:26,0:26:78.23:0,78,1424	0/0:31,0:31:93.32:0,93,1786	0/0:34,0:34:99:0,102,1886	0/0:18,0:18:54.17:0,54,1004	0/0:28,0:28:78.22:0,78,1403	0/0:29,0:29:84.29:0,84,1622	0/0:25,0:25:75.26:0,75,1447	0/0:17,0:17:48.16:0,48,913	0/0:26,0:26:75.26:0,75,1448	0/0:39,0:39:99:0,117,2190	0/0:14,0:14:42.12:0,42,764	1/1:0,41:40:99:1725,117,0	0/0:34,0:33:99:0,99,1879	1/1:2,19:21:50.79:780,51,0
chr10	67856256	.	TC	T	3441.86	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=12.322;DP=778;FS=1.320;HRun=2;HaplotypeScore=106.5414;InbreedingCoeff=0.9998;MQ=79.50;MQ0=0;MQRankSum=-1.859;QD=34.77;ReadPosRankSum=2.885;VQSLOD=3.6785;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,114,1678	0/0:10,0:10:30.10:0,30,449	0/0:31,0:31:84.22:0,84,1162	0/0:25,0:25:39.09:0,39,842	0/0:19,0:19:57.19:0,57,848	0/0:29,0:29:87.26:0,87,1238	0/0:29,0:29:87.27:0,87,1260	0/0:35,0:35:93.30:0,93,1338	0/0:26,0:26:75.18:0,75,1057	0/0:34,0:34:99:0,99,1459	0/0:26,0:26:78.25:0,78,1145	0/0:34,0:34:99:0,102,1447	1/1:0,23:23:63.16:795,63,0	0/0:31,0:31:93.30:0,93,1357	0/0:44,0:44:99:0,129,1911	0/0:24,0:24:72.22:0,72,1038	0/0:31,0:31:90.27:0,90,1295	0/0:20,0:20:60.20:0,60,884	0/0:25,0:25:69.23:0,69,1012	0/0:23,0:23:69.21:0,69,991	0/0:32,0:32:93.30:0,93,1360	1/1:1,28:29:75.23:959,75,0	1/1:1,24:25:69.22:884,69,0	1/1:1,21:22:63.19:804,63,0	0/0:29,0:29:84.28:0,84,1244	0/0:26,0:26:78.26:0,78,1169	0/0:42,0:41:99:0,126,1873	0/0:15,0:15:45.13:0,45,647
chr10	67856338	.	C	CTCA	11943.37	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=15.998;DP=772;FS=3.607;HRun=0;HaplotypeScore=127.9448;InbreedingCoeff=0.9929;MQ=72.56;MQ0=1;MQRankSum=-6.960;QD=60.94;ReadPosRankSum=3.437;VQSLOD=6.6511;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,141,2588	1/1:0,12:12:33.11:779,33,0	0/0:31,0:30:85.53:0,86,1501	0/0:41,0:41:99:0,114,2007	0/0:21,0:21:63.22:0,63,1174	0/0:25,0:25:75.26:0,75,1398	0/0:32,0:32:93.32:0,93,1733	1/1:3,18:23:57.20:1302,57,0	1/1:3,20:23:66.21:1423,66,0	0/0:21,0:21:63.22:0,63,1174	0/0:19,0:19:54.19:0,54,1005	0/0:29,0:29:87.28:0,87,1586	1/1:2,18:20:57.20:1305,57,0	0/0:41,0:41:99:0,117,2180	0/0:48,0:48:99:0,141,2489	0/0:33,0:33:93.32:0,93,1732	1/1:0,34:35:93.32:2175,93,0	1/1:3,20:23:10.37:1310,10,0	0/0:23,0:23:66.19:0,66,1195	0/0:28,0:28:81.26:0,81,1442	0/0:55,0:54:99:0,160,2949	1/1:1,19:20:51.18:1186,51,0	1/1:0,19:20:57.20:1312,57,0	1/1:2,18:20:50.61:1150,51,0	0/0:20,0:20:60.12:0,60,1016	0/0:18,0:18:54.14:0,54,959	0/0:33,0:33:99:0,99,1812	0/0:9,0:9:27.09:0,27,503
chr10	67856425	.	T	TAAC	13757.16	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-14.525;DP=745;FS=0.950;HRun=0;HaplotypeScore=103.7046;InbreedingCoeff=0.9589;MQ=76.27;MQ0=1;MQRankSum=-3.703;QD=55.25;ReadPosRankSum=-0.562;VQSLOD=6.3327;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,160,2524	1/1:3,3:6:12.04:234,12,0	0/0:29,0:27:66.21:0,66,1017	0/0:26,0:24:56.13:0,56,848	0/0:20,0:20:60.20:0,60,964	0/0:29,0:29:81.26:0,81,1278	0/0:40,0:40:99:0,105,1639	1/1:7,25:34:81.25:1656,81,0	1/1:4,27:31:81.28:1778,81,0	0/0:23,0:23:63.21:0,63,1012	0/0:20,0:20:60.20:0,60,964	0/0:29,0:29:81.26:0,81,1274	1/1:2,15:17:45.15:986,45,0	0/0:19,0:19:57.19:0,57,916	0/0:39,0:39:99:0,114,1809	0/0:23,1:24:0.14:0,0,944	1/1:6,30:36:79.52:1817,80,0	1/1:5,11:16:33.11:728,33,0	0/0:22,0:22:63.21:0,63,995	0/0:21,0:21:60.20:0,60,964	0/0:47,0:47:99:0,132,2097	1/1:2,23:25:66.23:1426,66,0	1/1:1,16:18:48.16:1026,48,0	1/1:2,23:25:66.23:1457,66,0	0/0:22,0:22:66.23:0,66,1061	1/1:1,29:31:93.32:1988,93,0	0/0:32,0:32:87.30:0,87,1397	1/1:0,10:10:30.10:661,30,0
chr10	67856569	.	GA	G	246.86	PASS	AB=0.744;AC=1;AF=0.018;AN=56;BaseQRankSum=4.077;DP=753;FS=7.826;HRun=5;HaplotypeScore=79.8158;InbreedingCoeff=-0.0183;MQ=69.00;MQ0=0;MQRankSum=0.971;QD=7.71;ReadPosRankSum=-2.838;VQSLOD=-0.4521;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,114,1540	0/0:9,0:9:24.08:0,24,328	0/1:21,11:23:99:321,0,103	0/0:39,0:30:49.09:0,49,700	0/0:25,0:25:72.23:0,72,966	0/0:27,0:27:81.26:0,81,1089	0/0:26,0:26:66.21:0,66,885	0/0:33,0:33:84.27:0,84,1122	0/0:19,0:19:52.99:0,53,702	0/0:32,0:32:90.27:0,90,1207	0/0:24,0:24:63.21:0,63,860	0/0:30,0:30:78.25:0,78,1051	0/0:18,0:18:51.15:0,51,680	0/0:21,0:21:63.18:0,63,829	0/0:25,0:25:72.22:0,72,954	0/0:33,0:33:93.29:0,93,1242	0/0:27,0:27:78.22:0,78,1019	0/0:23,0:23:66.16:0,66,863	0/0:21,0:21:57.18:0,57,766	0/0:27,0:27:75.24:0,75,1005	0/0:26,0:26:75.14:0,75,938	0/0:30,0:30:84.19:0,84,1098	0/0:28,0:28:72.21:0,72,951	0/0:25,0:25:69.21:0,69,912	0/0:18,0:18:51.17:0,51,698	0/0:32,0:32:93.31:0,93,1270	0/0:28,0:28:81.24:0,81,1075	0/0:32,0:32:96.32:0,96,1309
chr10	67856979	.	TACTG	T	10082.78	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=9.263;DP=860;FS=2.138;HRun=0;HaplotypeScore=170.0526;InbreedingCoeff=0.9998;MQ=85.25;MQ0=0;MQRankSum=-9.320;QD=43.09;ReadPosRankSum=1.697;VQSLOD=5.5125;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,114,3076	1/1:0,12:13:39.13:737,39,0	0/0:27,0:27:75.26:0,75,1824	0/0:31,0:31:87.30:0,87,2179	0/0:27,0:27:81.28:0,81,2133	0/0:33,0:33:90.31:0,90,2427	0/0:30,0:30:87.28:0,87,2279	1/1:7,24:31:72.21:1297,72,0	1/1:2,32:34:81.20:1457,81,0	0/0:31,0:31:84.28:0,84,2188	0/0:16,0:16:48.16:0,48,1273	0/0:47,0:47:99:0,141,3657	1/1:6,30:36:87.30:1640,87,0	0/0:49,0:49:99:0,148,3917	0/0:38,0:38:99:0,114,2989	0/0:36,0:36:99:0,105,2822	1/1:1,31:32:75.26:1424,75,0	1/1:1,13:14:36.12:683,36,0	0/0:38,0:38:99:0,111,2782	0/0:21,0:21:57.20:0,57,1535	0/0:55,0:55:99:0,163,4262	1/1:1,23:24:63.22:1188,63,0	1/1:0,14:14:27.09:499,27,0	1/1:3,33:36:62.90:1159,63,0	0/0:17,0:17:51.16:0,51,1320	0/0:35,0:35:96.32:0,96,2489	0/0:34,0:33:93.32:0,93,2440	0/0:21,0:21:48.16:0,48,1254
chr10	67860442	.	A	AAG	1019.45	PASS	AB=0.605;AC=9;AF=0.161;AN=56;BaseQRankSum=1.227;DP=568;FS=9.898;HRun=0;HaplotypeScore=105.5111;InbreedingCoeff=0.7300;MQ=41.85;MQ0=22;MQRankSum=1.260;QD=9.53;ReadPosRankSum=4.012;VQSLOD=2.8303;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:48.64:0,49,395	1/1:0,8:8:13.31:171,13,0	1/1:25,0:4:6.77:25,7,0	0/0:45,0:11:7.87:0,8,117	0/0:26,0:25:55.94:0,56,408	0/0:22,0:21:13.88:0,14,175	0/0:23,0:22:28.02:0,28,217	1/1:6,22:29:13.70:513,14,0	0/0:19,0:18:39.64:0,40,252	0/0:22,0:22:5.59:0,6,139	0/0:16,0:16:34.55:0,35,263	0/0:11,0:11:6.98:0,7,95	0/0:20,0:21:28.43:0,28,379	0/0:11,0:11:8.64:0,9,79	0/0:14,0:14:18.32:0,18,150	0/0:14,0:14:12.83:0,13,161	0/1:8,14:21:6.02:206,0,6	1/1:6,12:16:8.03:253,8,0	0/0:18,0:14:19.59:0,20,157	0/0:30,0:30:52.39:0,52,454	0/0:11,0:9:22.53:0,23,149	0/0:7,0:7:5.88:0,6,36	0/0:13,0:13:33.26:0,33,293	0/0:18,0:17:27.90:0,28,220	0/0:26,0:26:24.26:0,24,260	0/0:25,0:24:58.05:0,58,455	0/0:24,0:23:23.66:0,24,239	0/0:16,0:14:25.30:0,25,215
chr10	67860445	.	AAAAG	A	984.24	PASS	AB=1.000;AC=24;AF=0.429;AN=56;BaseQRankSum=-2.808;DP=576;FS=11.242;HRun=0;HaplotypeScore=118.7903;InbreedingCoeff=-0.0926;MQ=43.93;MQ0=19;MQRankSum=-3.860;QD=2.52;ReadPosRankSum=-4.783;VQSLOD=-0.4661;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:29:27.33:27,0,439	0/1:9,0:9:25.56:26,0,63	0/0:27,0:4:4.22:0,4,52	0/1:48,0:12:11.39:11,0,146	0/0:28,0:27:35.17:0,35,502	0/0:23,0:22:25.25:0,25,293	0/1:23,0:23:26.84:27,0,239	0/1:30,0:29:98.15:172,0,98	0/0:20,0:19:41.69:0,42,550	0/0:23,0:23:2.24:0,2,308	0/0:16,0:16:13.27:0,13,247	0/1:12,0:12:33.15:33,0,45	1/1:21,1:22:15.01:213,15,0	0/1:11,0:11:7.50:8,0,85	0/1:14,0:14:19.04:19,0,158	0/0:14,0:14:5.09:0,5,213	0/1:23,0:21:27.83:56,0,28	0/1:20,0:15:12.91:13,0,85	0/1:17,0:13:28.89:29,0,63	0/1:30,0:30:3.67:4,0,512	0/0:11,0:9:4.95:0,5,46	1/1:5,0:5:0.89:2,1,0	1/1:12,3:15:10.46:182,10,0	1/1:16,1:16:20.27:199,20,0	0/1:26,0:26:2.90:3,0,213	0/1:25,0:24:18.26:83,0,18	0/0:24,0:23:24.11:0,24,271	1/1:13,0:13:7.61:45,8,0
chr10	67860447	.	AAG	A	2703.29	PASS	AB=0.974;AC=31;AF=0.554;AN=56;BaseQRankSum=-1.614;DP=588;FS=57.951;HRun=0;HaplotypeScore=99.7766;InbreedingCoeff=-0.1065;MQ=45.87;MQ0=19;MQRankSum=-5.500;QD=6.33;ReadPosRankSum=-3.693;VQSLOD=0.0238;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:6.54:0,7,318	1/1:11,0:11:17.97:114,18,0	0/0:32,0:7:15.79:0,16,87	0/0:51,0:14:7.07:0,7,158	0/0:27,0:26:46.30:0,46,367	0/1:22,1:22:12.51:13,0,170	0/1:24,0:24:99:124,0,177	1/1:32,0:31:52.91:359,53,0	0/0:20,0:19:41.75:0,42,439	0/1:22,2:24:99:116,0,223	0/1:16,0:16:28.47:28,0,164	0/1:12,0:12:24.55:179,0,25	0/1:21,1:22:28.67:185,0,29	0/1:12,0:12:50.28:126,0,50	0/1:13,1:14:75.94:131,0,76	0/1:16,0:16:77.85:78,0,164	1/1:24,0:22:22.97:147,23,0	1/1:19,0:14:10.44:36,10,0	0/1:18,1:15:67.53:148,0,68	0/1:29,1:30:99:103,0,282	0/1:11,0:9:32.13:32,0,35	1/1:7,0:7:1.07:3,1,0	0/1:14,0:14:0.08:141,0,0	1/1:15,0:14:19.24:126,19,0	0/1:25,1:26:99:287,0,101	1/1:25,0:24:33.31:296,33,0	0/1:21,1:21:39.79:40,0,189	1/1:9,0:9:12.35:68,12,0
chr10	67861112	.	T	TTCC	7236.78	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=10.624;DP=857;FS=1.957;HRun=0;HaplotypeScore=166.4286;InbreedingCoeff=0.9965;MQ=70.71;MQ0=3;MQRankSum=-13.495;QD=30.79;ReadPosRankSum=-4.823;VQSLOD=3.6143;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,114,1546	1/1:8,6:14:30.01:505,30,0	0/0:39,0:28:21.04:0,21,302	0/0:44,0:38:43.25:0,43,514	0/0:35,0:35:96.29:0,96,1339	0/0:28,0:28:54.18:0,54,785	0/0:39,0:39:99:0,99,1371	1/1:26,4:30:30.09:484,30,0	1/1:9,16:25:59.03:1008,59,0	0/0:30,0:30:63.20:0,63,897	0/0:27,0:27:72.23:0,72,1022	0/0:37,0:37:99:0,99,1393	1/1:12,15:28:57.11:1091,57,0	0/0:21,0:21:50.91:0,51,709	0/0:47,0:47:99:0,118,1698	0/0:39,1:40:40.44:0,40,1323	1/1:6,15:21:47.20:905,47,0	1/1:14,7:21:18.94:636,19,0	0/0:17,0:17:24.54:0,25,470	0/0:21,0:21:54.15:0,54,729	0/0:38,0:38:99:0,102,1480	1/1:11,20:31:65.48:881,65,0	1/1:15,15:30:54.73:813,55,0	1/1:23,12:34:20.92:913,21,0	0/0:31,0:31:87.29:0,87,1264	0/0:34,0:34:89.85:0,90,1090	0/0:32,0:32:81.27:0,81,1165	0/0:10,0:10:20.76:0,21,189
chr10	67861130	.	T	TTCC	10287.69	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=6.288;DP=830;FS=6.659;HRun=0;HaplotypeScore=153.2814;InbreedingCoeff=0.9982;MQ=63.70;MQ0=2;MQRankSum=-12.050;QD=38.68;ReadPosRankSum=-1.442;VQSLOD=5.2877;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:72.98:0,73,1700	1/1:3,7:10:21.07:443,21,0	0/0:25,0:17:32.96:0,33,428	0/0:34,0:26:37.07:0,37,545	0/0:35,0:35:93.32:0,93,1412	0/0:26,0:26:66.21:0,66,983	0/0:40,0:40:96.11:0,96,1413	1/1:7,13:20:39.13:824,39,0	1/1:9,17:26:57.16:1095,57,0	0/0:35,0:35:93.27:0,93,1388	0/0:26,0:26:75.25:0,75,1133	0/0:40,0:40:99:0,116,1734	1/1:5,21:27:51.65:1053,52,0	0/0:21,0:21:60.20:0,60,912	0/0:48,0:48:99:0,126,1872	0/0:43,1:44:54.35:0,54,1636	1/1:9,14:23:36.08:679,36,0	1/1:5,14:20:36.10:721,36,0	0/0:19,0:19:51.14:0,51,715	0/0:24,0:24:54.16:0,54,783	0/0:35,0:35:90.27:0,90,1323	1/1:6,23:30:63.88:1371,64,0	1/1:8,17:27:45.14:846,45,0	1/1:12,20:32:37.93:804,38,0	0/0:34,0:34:99:0,102,1528	1/1:8,32:42:65.74:2072,66,0	0/0:30,0:30:84.29:0,84,1269	1/1:1,7:8:18.06:381,18,0
chr10	67862045	.	T	TA	617.40	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=4.079;DP=581;FS=0.762;HRun=0;HaplotypeScore=77.3276;InbreedingCoeff=0.8748;MQ=67.94;MQ0=0;MQRankSum=0.040;QD=19.29;ReadPosRankSum=1.605;VQSLOD=5.3043;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,123,1677	0/0:8,0:8:17.75:0,18,149	0/0:13,0:10:23.44:0,23,285	0/0:11,0:9:5.36:0,5,162	0/0:37,0:37:99:0,108,1461	0/0:23,0:23:69.21:0,69,934	0/0:21,0:21:63.21:0,63,879	0/0:32,0:32:94.73:0,95,846	0/0:19,0:19:53.36:0,53,406	0/0:23,0:23:69.23:0,69,952	0/0:25,0:25:75.24:0,75,1026	0/0:18,0:18:54.18:0,54,754	0/0:14,0:14:35.56:0,36,290	0/0:10,0:10:30.09:0,30,401	0/0:23,0:23:69.23:0,69,962	0/0:23,0:23:69.22:0,69,941	0/0:29,0:29:81.22:0,81,552	0/0:15,0:15:41.17:0,41,296	0/0:25,0:25:75.21:0,75,994	0/0:27,0:27:75.12:0,75,1021	0/0:18,0:18:54.15:0,54,717	0/0:20,0:20:53.40:0,53,405	0/0:17,0:17:42.72:0,43,252	0/0:16,0:16:44.32:0,44,318	0/0:20,0:20:60.19:0,60,824	1/1:7,20:27:6.31:565,6,0	0/0:19,0:19:57.19:0,57,795	1/1:0,5:5:15.04:161,15,0
chr10	67862046	.	T	TA	4993.07	PASS	AB=0.533;AC=21;AF=0.375;AN=56;BaseQRankSum=-5.136;DP=582;FS=0.000;HRun=9;HaplotypeScore=62.0220;InbreedingCoeff=0.9199;MQ=67.93;MQ0=0;MQRankSum=-2.293;QD=24.48;ReadPosRankSum=-0.544;VQSLOD=5.2631;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:44:87.31:0,87,895	0/1:1,7:8:10.57:118,0,11	0/0:13,0:10:17.62:0,18,134	0/0:12,0:9:11.58:0,12,84	0/0:36,0:36:98.86:0,99,841	0/0:22,0:22:59.97:0,60,518	0/0:21,0:21:53.95:0,54,463	1/1:10,23:33:69.08:728,69,0	1/1:3,16:19:45.12:492,45,0	0/0:24,0:24:65.96:0,66,569	0/0:25,0:25:65.98:0,66,570	0/0:18,0:18:47.96:0,48,411	1/1:3,11:14:27.07:299,27,0	0/0:10,0:10:17.97:0,18,152	0/0:23,0:23:53.96:0,54,465	0/0:23,0:23:47.97:0,48,414	1/1:4,24:28:46.14:737,46,0	1/1:2,13:15:36.10:398,36,0	0/0:23,1:24:23.79:0,24,436	0/0:27,0:27:71.95:0,72,621	0/0:18,0:18:47.97:0,48,411	1/1:2,18:20:45.12:498,45,0	1/1:0,17:17:45.04:481,45,0	1/1:2,14:16:39.11:431,39,0	0/0:19,0:19:50.97:0,51,440	1/1:29,0:29:33.47:645,33,0	0/0:19,0:19:41.98:0,42,365	1/1:5,0:5:15.04:166,15,0
chr10	67863489	.	G	GATTT	2069.71	PASS	AC=32;AF=0.727;AN=44;BaseQRankSum=0.678;DP=367;FS=2.446;HRun=0;HaplotypeScore=144.3567;InbreedingCoeff=0.6352;MQ=67.20;MQ0=1;MQRankSum=-1.063;QD=9.00;ReadPosRankSum=1.587;VQSLOD=3.2340;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:6.94:0,7,133	0/0:9,0:9:8.85:0,9,56	./.	./.	0/0:14,0:14:14.86:0,15,232	1/1:6,5:11:12.04:282,12,0	1/1:8,0:8:9.01:115,9,0	./.	1/1:17,0:17:15.83:105,16,0	./.	1/1:8,0:8:3:25,3,0	1/1:13,0:15:3.01:51,3,0	1/1:16,0:16:10.18:48,10,0	1/1:11,0:11:3:25,3,0	1/1:11,0:11:3.01:70,3,0	0/0:9,0:9:6.01:0,6,72	0/0:11,0:11:1.80:0,2,16	0/0:9,0:7:5.93:0,6,40	1/1:16,4:20:12.04:257,12,0	1/1:8,3:11:12.04:261,12,0	./.	1/1:19,0:19:10.10:40,10,0	1/1:15,0:15:10.43:53,10,0	./.	1/1:12,6:23:30.10:566,30,0	1/1:25,0:25:18.25:121,18,0	1/1:9,3:12:6.02:141,6,0	1/1:8,0:8:8.42:60,8,0
chr10	67863534	.	C	CTT	2412.63	PASS	AB=1.000;AC=26;AF=0.464;AN=56;BaseQRankSum=12.612;DP=320;FS=13.211;HRun=3;HaplotypeScore=146.7412;InbreedingCoeff=0.5513;MQ=56.66;MQ0=3;MQRankSum=-11.420;QD=11.38;ReadPosRankSum=0.795;VQSLOD=-0.4323;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:8:24.05:0,24,312	1/1:8,0:8:13.94:81,14,0	0/0:10,0:5:12.50:0,12,158	0/1:17,0:9:14.96:15,0,102	0/0:11,0:11:33.11:0,33,503	0/0:12,0:12:28.78:0,29,343	0/1:7,0:7:8.96:9,0,172	1/1:6,0:5:11.34:66,11,0	1/1:21,0:21:36.21:420,36,0	0/0:2,0:2:6.02:0,6,92	0/0:6,0:6:15.05:0,15,229	0/1:4,0:4:8.46:8,0,126	1/1:17,0:18:44.56:322,45,0	0/0:8,0:8:18.06:0,18,273	0/1:7,0:7:1.84:2,0,209	0/0:4,0:4:12.04:0,12,184	0/1:15,0:15:20.98:120,0,21	1/1:12,0:10:9.09:63,9,0	0/1:15,0:14:35.05:35,0,352	0/0:13,0:13:23.29:0,23,451	0/0:4,0:4:12.04:0,12,184	1/1:21,1:22:53.01:373,53,0	1/1:18,1:19:53.56:400,54,0	1/1:7,0:7:9.75:59,10,0	0/0:21,0:21:9.64:0,10,457	1/1:29,1:30:41.62:545,42,0	0/0:9,0:8:21.92:0,22,284	1/1:3,1:4:11.93:97,12,0
chr10	67863537	.	T	TCC	4241.30	PASS	AB=0.698;AC=14;AF=0.250;AN=56;BaseQRankSum=5.496;DP=332;FS=0.000;HRun=1;HaplotypeScore=138.8183;InbreedingCoeff=0.0170;MQ=56.94;MQ0=3;MQRankSum=-8.982;QD=22.80;ReadPosRankSum=3.516;VQSLOD=3.2522;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:8:21.06:0,21,291	0/1:2,4:6:57.49:154,0,57	0/0:12,0:6:12.51:0,13,171	0/1:16,0:9:17.99:18,0,96	0/0:11,0:11:33.11:0,33,503	0/0:12,0:12:36.10:0,36,485	0/0:7,0:7:18.04:0,18,234	1/1:2,8:10:23.99:337,24,0	0/1:9,13:22:54.40:595,0,54	0/0:2,0:2:6.02:0,6,92	0/0:5,0:5:15.05:0,15,229	0/0:5,0:5:14.98:0,15,182	0/1:6,12:19:62.76:474,0,63	0/0:8,0:8:21.06:0,21,299	0/0:8,0:8:18.52:0,19,254	0/0:4,0:4:12.04:0,12,184	0/1:8,7:15:79.31:372,0,79	0/1:5,7:10:99:112,0,125	0/0:17,0:16:46.62:0,47,557	0/0:14,0:14:39.10:0,39,548	0/0:4,0:4:12.04:0,12,183	0/1:8,13:21:63.57:579,0,64	0/1:8,12:20:62.49:555,0,62	1/1:0,7:7:8.77:169,9,0	0/0:21,0:21:56.97:0,57,705	0/1:14,17:32:99:872,0,163	0/0:8,0:7:24.08:0,24,339	0/1:4,0:4:6.32:6,0,48
chr10	67863717	.	AAAAC	A	6122.14	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=13.517;DP=534;FS=11.655;HRun=0;HaplotypeScore=87.3680;InbreedingCoeff=0.9891;MQ=56.56;MQ0=9;MQRankSum=-4.026;QD=35.59;ReadPosRankSum=1.847;VQSLOD=4.1966;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:69.20:0,69,1606	1/1:0,4:4:9.03:151,9,0	0/0:25,0:14:34.36:0,34,802	0/0:30,0:15:42.13:0,42,878	0/0:18,0:18:45.15:0,45,1101	0/0:17,0:17:39.12:0,39,917	0/0:16,0:16:45.15:0,45,1089	1/1:7,32:37:93.27:1460,93,0	1/1:5,17:22:45.15:757,45,0	0/0:15,0:14:39.13:0,39,901	0/0:9,0:9:24.08:0,24,565	0/0:10,0:10:24.08:0,24,591	1/1:2,15:17:45.15:757,45,0	0/0:16,0:16:48.16:0,48,1186	0/0:17,0:17:39.13:0,39,949	0/0:16,0:16:36.12:0,36,871	1/1:5,11:16:30.10:505,30,0	1/1:7,11:18:27.30:500,27,0	0/0:22,0:20:48.15:0,48,1091	0/0:12,0:12:27.09:0,27,651	0/0:35,0:35:93.32:0,93,2271	1/1:0,15:15:42.10:661,42,0	1/1:3,14:17:36.08:575,36,0	1/1:4,20:24:45.15:757,45,0	0/0:18,0:18:48.16:0,48,1182	0/0:35,0:35:99:0,102,2460	0/0:14,0:14:36.12:0,36,892	0/0:9,0:9:21.07:0,21,506
chr10	67864277	.	ATGT	A	4241.62	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=12.152;DP=759;FS=3.812;HRun=0;HaplotypeScore=125.1119;InbreedingCoeff=0.9994;MQ=94.31;MQ0=0;MQRankSum=-2.530;QD=38.56;ReadPosRankSum=3.436;VQSLOD=5.8156;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,108,2426	0/0:16,0:16:48.15:0,48,1046	0/0:41,0:41:99:0,111,2254	0/0:28,0:28:75.13:0,75,1512	0/0:24,0:24:66.21:0,66,1431	0/0:32,0:32:90.27:0,90,1960	0/0:32,0:32:90.25:0,90,1946	0/0:23,0:23:60.19:0,60,1277	0/0:29,0:29:81.25:0,81,1711	0/0:24,0:24:69.23:0,69,1499	0/0:14,0:14:39.12:0,39,813	0/0:19,0:19:57.20:0,57,1274	1/1:0,21:21:54.18:899,54,0	0/0:30,0:30:84.29:0,84,1900	0/0:31,0:31:93.32:0,93,2088	0/0:32,0:32:90.31:0,90,1987	0/0:42,0:41:99:0,126,2765	0/0:25,0:25:72.25:0,72,1629	0/0:23,0:23:69.24:0,69,1540	0/0:21,0:21:63.20:0,63,1341	0/0:32,0:32:90.30:0,90,1975	1/1:2,27:29:69.24:1148,69,0	1/1:1,21:22:54.18:898,54,0	1/1:4,34:38:78.27:1297,78,0	0/0:20,0:20:57.19:0,57,1248	0/0:40,0:40:99:0,114,2579	0/0:24,0:24:72.25:0,72,1605	0/0:8,0:8:24.08:0,24,544
chr10	67865459	.	GC	G	828.50	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.012;DP=549;FS=0.000;HRun=7;HaplotypeScore=56.9785;InbreedingCoeff=0.9497;MQ=82.19;MQ0=0;MQRankSum=-3.319;QD=21.24;ReadPosRankSum=2.536;VQSLOD=3.2995;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,33:39:92.24:923,92,0	0/0:6,0:6:15.05:0,15,188	0/0:20,1:21:44.73:0,45,470	0/0:13,0:13:30.08:0,30,357	0/0:17,0:17:45.14:0,45,562	0/0:16,0:16:42.12:0,42,513	0/0:23,1:24:26.51:0,27,613	0/0:15,0:15:35.52:0,36,422	0/0:24,0:24:69.10:0,69,817	0/0:19,0:19:48.14:0,48,589	0/0:14,0:14:36.11:0,36,449	0/0:20,0:20:60.09:0,60,696	0/0:18,0:18:48.06:0,48,546	0/0:24,0:24:60.16:0,60,719	0/0:21,0:21:60.19:0,60,754	0/0:15,0:15:45.09:0,45,535	0/0:21,1:22:35.61:0,36,749	0/0:27,0:27:81.26:0,81,1016	0/0:14,0:14:36.08:0,36,417	0/0:13,0:13:39.11:0,39,478	0/0:25,1:26:41.62:0,42,823	0/0:21,1:22:23.53:0,24,579	0/0:10,0:10:27.07:0,27,327	0/0:33,0:33:90.22:0,90,1087	0/0:26,0:26:78.25:0,78,981	0/0:25,0:25:64.88:0,65,440	0/0:21,0:21:57.11:0,57,683	0/0:4,0:4:11.92:0,12,87
chr10	67866644	.	T	TTAA	1956.25	PASS	AB=0.552;AC=10;AF=0.179;AN=56;BaseQRankSum=12.113;DP=686;FS=1.578;HRun=0;HaplotypeScore=122.2343;InbreedingCoeff=0.0500;MQ=71.49;MQ0=0;MQRankSum=-3.480;QD=10.24;ReadPosRankSum=-2.057;VQSLOD=2.8228;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,102,1771	1/1:2,0:8:18.45:185,18,0	0/0:21,0:20:36.58:0,37,738	0/0:21,0:19:20.67:0,21,458	0/0:37,0:38:99:0,108,1880	0/0:26,0:26:78.17:0,78,1315	0/0:21,0:21:63.20:0,63,1072	0/1:12,1:36:90.95:633,0,91	0/1:3,0:21:25.95:122,0,26	0/0:33,0:33:93.22:0,93,1511	0/0:23,0:24:72.21:0,72,1211	0/0:32,0:33:96.09:0,96,1545	0/1:7,0:19:30.28:30,0,201	0/0:21,0:21:60.15:0,60,1027	0/0:18,0:19:54.09:0,54,821	0/0:22,0:22:66.21:0,66,1136	0/1:3,0:19:42.12:266,0,42	0/1:6,0:30:18.90:594,0,19	0/0:21,0:21:63.17:0,63,991	0/0:28,0:28:80.61:0,81,1258	0/0:19,0:19:51.06:0,51,768	0/1:1,0:12:35.06:35,0,64	0/1:2,0:20:9.93:125,0,10	0/1:2,0:26:15.03:117,0,15	0/0:26,0:27:78.24:0,78,1332	0/0:4,0:30:59.15:0,59,466	0/0:34,0:34:99:0,102,1763	0/0:5,0:18:47.15:0,47,309
chr10	67868304	.	C	CTT	3562.52	PASS	AB=0.650;AC=21;AF=0.375;AN=56;BaseQRankSum=3.177;DP=587;FS=1.699;HRun=10;HaplotypeScore=86.0168;InbreedingCoeff=0.9142;MQ=75.52;MQ0=0;MQRankSum=-1.512;QD=16.73;ReadPosRankSum=-0.471;VQSLOD=2.3108;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:42:83.44:0,83,847	1/1:0,7:7:15.05:224,15,0	0/0:25,0:17:20.81:0,21,177	0/0:21,0:14:14.26:0,14,149	0/0:26,0:28:36.35:0,36,472	0/0:16,0:18:23.51:0,24,349	0/0:15,0:15:39.07:0,39,396	1/1:11,15:27:53.56:734,54,0	1/1:6,1:20:30.46:141,30,0	0/0:20,0:22:17.40:0,17,282	0/0:23,0:23:42.02:0,42,427	0/0:25,0:26:62.79:0,63,608	1/1:2,0:16:36.22:151,36,0	0/0:12,0:12:36.08:0,36,366	0/0:14,0:14:30.04:0,30,305	0/0:20,0:20:39.19:0,39,470	1/1:3,20:26:40.60:518,41,0	1/1:9,10:20:35.56:462,36,0	0/0:20,0:19:38.76:0,39,368	0/0:19,0:21:32.72:0,33,379	0/0:8,0:8:18.03:0,18,183	1/1:2,0:16:28.86:129,29,0	1/1:5,0:22:7.77:102,8,0	1/1:5,0:20:15.94:169,16,0	0/0:22,0:24:41.75:0,42,472	1/1:6,17:25:15.63:643,16,0	0/0:34,0:34:83.88:0,84,832	0/1:6,7:13:6.44:289,0,6
chr10	67868521	.	G	GACA	278.90	PASS	AB=0.958;AC=3;AF=0.054;AN=56;BaseQRankSum=-1.826;DP=672;FS=1.320;HRun=0;HaplotypeScore=93.2763;InbreedingCoeff=0.7431;MQ=70.39;MQ0=0;MQRankSum=0.454;QD=8.45;ReadPosRankSum=0.432;VQSLOD=2.8263;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:81.27:0,81,1174	0/0:8,0:8:18.03:0,18,241	0/0:16,0:16:24.07:0,24,332	0/0:26,0:24:23.69:0,24,470	0/0:30,0:30:75.25:0,75,1097	0/0:35,0:35:87.29:0,87,1273	0/0:21,0:21:51.17:0,51,744	0/0:29,0:29:60.18:0,60,843	1/1:5,5:10:18.06:369,18,0	0/0:35,0:35:81.24:0,81,1146	0/0:14,0:14:39.10:0,39,548	0/0:30,0:30:72.09:0,72,958	0/0:23,0:23:66.22:0,66,957	0/0:18,0:18:42.14:0,42,615	0/0:24,0:24:57.11:0,57,789	0/1:22,1:23:1.75:2,0,773	0/0:33,0:33:84.24:0,84,1202	0/0:19,0:19:51.17:0,51,745	0/0:19,0:19:38.99:0,39,479	0/0:21,0:21:57.17:0,57,814	0/0:19,0:19:51.17:0,51,746	0/0:18,0:18:45.12:0,45,635	0/0:22,0:22:54.17:0,54,769	0/0:36,0:36:93.28:0,93,1321	0/0:26,0:26:66.68:0,67,947	0/0:31,0:31:80.63:0,81,1149	0/0:40,0:40:99:0,99,1446	0/0:14,0:14:42.12:0,42,595
chr10	67868667	.	TTGTTTGTTTTGTTATACC	T	6686.94	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=10.882;DP=709;FS=3.545;HRun=0;HaplotypeScore=332.9958;InbreedingCoeff=0.9988;MQ=67.62;MQ0=0;MQRankSum=-10.966;QD=84.64;ReadPosRankSum=1.847;VQSLOD=4.1750;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,166,13180	0/0:13,0:13:39.13:0,39,3301	0/0:20,0:19:49.11:0,49,3188	0/0:26,0:23:66.22:0,66,4132	0/0:26,0:26:72.23:0,72,5433	0/0:35,0:35:96.33:0,96,7907	0/0:19,0:19:51.17:0,51,4358	0/0:29,0:29:84.28:0,84,6047	0/0:21,0:21:63.22:0,63,5348	0/0:21,0:21:60.21:0,60,4489	0/0:21,0:21:60.21:0,60,4946	0/0:30,0:30:84.29:0,84,6938	1/1:3,17:20:42.14:2172,42,0	0/0:23,0:23:69.22:0,69,5194	0/0:26,0:26:75.26:0,75,6401	0/0:20,0:19:51.15:0,51,3747	0/0:39,0:39:99:0,114,9293	0/0:27,0:27:78.27:0,78,6283	0/0:20,0:20:60.21:0,60,4321	0/0:35,0:35:99:0,105,8616	0/0:26,0:26:78.27:0,78,6145	1/1:2,16:18:42.14:1882,42,0	1/1:6,10:16:21.07:996,21,0	1/1:7,18:25:33.58:1637,34,0	0/0:27,0:27:81.28:0,81,5870	0/0:24,0:24:72.25:0,72,5909	0/0:33,0:33:93.32:0,93,7314	0/0:14,0:14:42.14:0,42,3594
chr10	67869641	.	G	GC	893.60	PASS	AB=0.886;AC=19;AF=0.339;AN=56;BaseQRankSum=-3.433;DP=384;FS=31.112;HRun=0;HaplotypeScore=324.2703;InbreedingCoeff=-0.2910;MQ=102.44;MQ0=0;MQRankSum=0.939;QD=3.75;ReadPosRankSum=-4.295;VQSLOD=1.2791;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:17,4:21:8.93:9,0,124	0/0:2,0:2:2.29:0,2,6	0/0:32,0:32:84.70:0,85,1114	0/0:26,0:26:72.14:0,72,955	0/0:10,0:10:11.83:0,12,36	0/0:8,0:8:5.21:0,5,27	0/0:14,0:14:16:0,16,89	0/1:13,5:18:46.62:169,0,47	0/1:12,2:14:68.64:71,0,69	0/1:19,2:21:64.11:64,0,121	0/1:9,0:9:31.78:32,0,72	0/1:18,0:18:21.71:22,0,113	0/1:13,1:14:24.52:25,0,133	0/1:9,3:12:11.40:80,0,11	0/1:19,0:20:18.22:18,0,122	0/1:17,2:19:28.14:28,0,59	0/0:11,0:11:6.26:0,6,30	0/1:4,0:5:2.73:41,0,3	0/1:4,3:7:15.16:101,0,15	0/1:10,2:12:19.46:75,0,19	0/1:11,0:11:44.03:44,0,134	0/1:6,3:9:0.29:46,0,0	0/0:8,0:8:14.31:0,14,95	0/1:6,4:10:64.66:81,0,65	0/0:12,3:15:16.06:0,16,77	0/1:13,0:13:4.94:5,0,110	0/0:20,0:20:32.82:0,33,128	1/1:2,0:5:5.58:138,6,0
chr10	67870093	.	AGAGGTGGTGTGTAGTTCTACG	A	2598.72	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=-0.459;DP=639;FS=2.334;HRun=0;HaplotypeScore=380.4667;InbreedingCoeff=0.8644;MQ=80.82;MQ0=0;MQRankSum=-0.183;QD=25.48;ReadPosRankSum=-1.994;VQSLOD=1.1538;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,105,2053	1/1:13,0:13:26.95:415,27,0	0/0:23,0:22:29.90:0,30,480	0/0:52,0:51:74.82:0,75,1247	0/0:18,0:18:45.14:0,45,821	0/0:27,0:27:54.48:0,54,835	0/0:19,0:19:48.01:0,48,651	1/1:11,15:26:36.10:544,36,0	0/0:20,0:20:51.15:0,51,926	0/0:24,0:24:46.05:0,46,624	0/0:12,0:12:28.27:0,28,367	0/0:16,0:16:41.86:0,42,505	0/0:26,0:26:72.21:0,72,1224	0/0:21,0:21:38.82:0,39,461	0/0:24,0:24:44.86:0,45,605	0/1:9,0:9:62.61:63,0,180	1/1:29,0:29:20.27:946,20,0	1/1:25,0:25:25.77:796,26,0	0/0:21,0:21:39.02:0,39,526	0/0:21,0:21:50.92:0,51,594	0/0:37,0:37:75.03:0,75,818	0/0:29,0:29:78.23:0,78,1446	0/0:11,0:11:27.09:0,27,476	0/0:29,0:29:69.20:0,69,1222	0/0:18,0:18:42.06:0,42,568	0/0:21,0:21:50.94:0,51,633	0/0:15,0:15:35.42:0,35,396	0/0:11,0:11:24:0,24,326
chr10	67870197	.	CAGAGGTGCTGTGTAGTTGTAT	C	4583.59	PASS	AB=1.000;AC=27;AF=0.482;AN=56;BaseQRankSum=5.766;DP=547;FS=2.739;HRun=0;HaplotypeScore=322.0884;InbreedingCoeff=-0.1587;MQ=57.95;MQ0=8;MQRankSum=-1.444;QD=12.77;ReadPosRankSum=1.856;VQSLOD=2.8120;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:46,0:44:29.05:988,29,0	0/0:8,0:8:1.43:0,1,306	0/0:40,0:23:68.53:0,69,1237	0/0:48,0:33:96.45:0,96,1818	1/1:0,20:20:29.40:283,29,0	0/1:10,0:10:63.69:122,0,64	0/1:24,0:23:99:188,0,370	0/0:36,0:35:97.06:0,97,1676	1/1:17,0:16:5.29:472,5,0	0/1:27,0:27:99:283,0,131	0/1:10,0:10:5.59:28,0,6	0/1:6,0:6:15.99:82,0,16	0/1:16,0:16:28.87:343,0,29	0/1:12,0:11:99:136,0,116	0/1:23,0:23:99:286,0,130	0/1:9,0:9:48.11:103,0,48	0/0:25,0:23:47.88:0,48,752	0/0:24,0:23:38.45:0,38,743	0/1:23,0:21:99:111,0,390	1/1:15,0:15:3.01:36,3,0	0/1:28,0:28:42.91:43,0,298	0/1:19,0:19:37.77:40,0,38	0/0:7,0:7:0.47:0,0,1	0/1:24,0:23:37.62:337,0,38	0/1:10,0:10:55:140,0,55	1/1:14,0:14:16.65:369,17,0	0/1:3,0:3:10.91:48,0,11	1/1:3,0:3:6.02:145,6,0
chr10	67870205	.	CTGTGTAGTTGTATGGAGGTGG	C	12137	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=6.261;DP=557;FS=12.844;HRun=0;HaplotypeScore=317.4601;InbreedingCoeff=0.8448;MQ=59.09;MQ0=6;MQRankSum=-3.201;QD=31.52;ReadPosRankSum=2.086;VQSLOD=2.2545;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:42,0:40:72.92:1083,73,0	0/0:8,0:8:18.06:0,18,613	0/0:33,0:24:45.05:0,45,893	0/0:41,0:35:70.26:0,70,1425	1/1:20,0:20:28:263,28,0	1/1:11,0:11:29.78:494,30,0	1/1:25,0:24:42.04:809,42,0	0/0:40,0:38:99:0,102,1793	1/1:15,0:15:36.11:624,36,0	1/1:1,28:29:56.21:947,56,0	1/1:0,12:12:3.01:69,3,0	1/1:12,0:12:33.04:798,33,0	1/1:19,0:19:45.03:1141,45,0	1/1:13,0:12:26.88:464,27,0	1/1:26,0:26:51.02:1111,51,0	1/1:11,0:11:29.75:539,30,0	0/0:25,0:23:60.10:0,60,1437	0/0:25,0:24:41.34:0,41,1188	1/1:4,20:22:56.29:670,56,0	1/1:0,15:15:3.01:74,3,0	1/1:28,0:28:34.40:403,34,0	1/1:1,17:18:3.01:70,3,0	1/1:0,8:8:2.75:16,3,0	1/1:20,0:19:25.19:536,25,0	1/1:11,0:11:30.04:538,30,0	1/1:1,17:18:44.84:846,45,0	1/1:5,0:5:14.98:400,15,0	1/1:3,0:3:6.02:245,6,0
chr10	67871212	.	CAA	C	3634.13	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=9.774;DP=607;FS=1.471;HRun=2;HaplotypeScore=74.9920;InbreedingCoeff=0.9971;MQ=70.53;MQ0=1;MQRankSum=-0.987;QD=43.26;ReadPosRankSum=1.602;VQSLOD=3.7538;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,165,3135	1/1:0,6:6:18.06:293,18,0	0/0:18,0:18:51.14:0,51,899	0/0:19,0:18:43.08:0,43,766	0/0:18,0:18:54.14:0,54,1048	0/0:15,0:15:45.15:0,45,868	0/0:23,0:23:69.22:0,69,1354	1/1:0,27:27:78.05:1212,78,0	0/0:23,0:23:69.22:0,69,1365	0/0:27,0:27:81.27:0,81,1604	0/0:12,0:12:36.12:0,36,731	0/0:27,0:27:78.25:0,78,1547	0/0:18,0:18:54.13:0,54,1022	0/0:30,0:30:90.27:0,90,1691	0/0:30,0:30:90.29:0,90,1743	0/0:26,0:26:78.23:0,78,1543	1/1:1,22:23:57.19:908,57,0	1/1:0,28:28:75.26:1221,75,0	0/0:21,0:21:63.19:0,63,1164	0/0:14,0:14:42.09:0,42,803	0/0:30,0:30:90.31:0,90,1819	0/0:16,0:16:45.15:0,45,914	0/0:10,0:10:27.09:0,27,534	0/0:19,0:19:57.12:0,57,1045	0/0:20,0:20:60.21:0,60,1218	0/0:24,0:24:72.24:0,72,1419	0/0:19,0:18:54.19:0,54,1097	0/0:9,0:9:27.09:0,27,548
chr10	67871467	.	GA	G	8102.19	PASS	AB=1.000;AC=45;AF=0.804;AN=56;BaseQRankSum=3.611;DP=555;FS=1.621;HRun=10;HaplotypeScore=99.9295;InbreedingCoeff=0.8494;MQ=64.67;MQ0=15;MQRankSum=-4.033;QD=17.85;ReadPosRankSum=1.059;VQSLOD=4.9586;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:16,29:44:99:973,116,0	1/1:5,6:11:20.98:178,21,0	0/0:28,0:14:13.26:0,13,167	0/1:29,0:13:18.04:18,0,99	1/1:6,16:21:54.45:466,54,0	1/1:6,10:16:32.97:285,33,0	1/1:12,13:23:36.27:423,36,0	1/1:8,22:29:65.94:563,66,0	1/1:10,10:19:21.19:322,21,0	1/1:5,14:19:53.99:468,54,0	1/1:7,9:15:29.96:308,30,0	1/1:5,9:13:29.96:254,30,0	0/0:18,0:17:36.99:0,37,340	1/1:5,13:18:53.94:459,54,0	1/1:6,6:12:26.98:233,27,0	1/1:5,7:12:26.98:234,27,0	1/1:11,17:27:33.15:484,33,0	1/1:12,12:24:41.77:344,42,0	1/1:4,10:14:37.53:311,38,0	1/1:6,13:19:42.11:371,42,0	1/1:3,5:7:14.99:129,15,0	0/0:15,0:15:39.05:0,39,408	0/0:18,0:18:39.04:0,39,403	0/0:19,1:18:8.08:0,8,286	1/1:7,13:20:50.68:418,51,0	1/1:8,13:18:30.64:327,31,0	1/1:8,16:22:53.51:454,54,0	1/1:5,2:6:9:78,9,0
chr10	67871487	.	GT	G	5422.35	PASS	AB=0.638;AC=46;AF=0.821;AN=56;BaseQRankSum=-1.440;DP=555;FS=4.978;HRun=14;HaplotypeScore=113.3686;InbreedingCoeff=0.2544;MQ=75.61;MQ0=4;MQRankSum=-3.966;QD=11.30;ReadPosRankSum=2.183;VQSLOD=4.1977;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,31:44:41.65:541,42,0	1/1:3,4:7:14.86:102,15,0	0/0:37,1:18:9.13:0,9,55	0/0:34,2:20:8.35:0,8,72	1/1:5,13:19:12.66:216,13,0	1/1:2,9:12:28.76:190,29,0	0/1:11,18:27:7.53:306,0,8	1/1:18,11:29:32.15:305,32,0	1/1:3,10:13:34.73:229,35,0	1/1:11,17:28:25.56:316,26,0	1/1:7,11:19:6.45:173,6,0	1/1:2,10:12:26.72:182,27,0	1/1:6,11:18:25.29:159,25,0	1/1:4,17:21:53.46:366,53,0	0/1:4,8:12:4.12:120,0,4	1/1:4,7:11:17.76:123,18,0	1/1:9,19:28:28.62:342,29,0	1/1:7,10:20:10.81:183,11,0	1/1:8,10:19:31.57:205,32,0	0/1:6,13:20:6.04:237,0,6	1/1:3,4:8:14.22:90,14,0	0/1:7,6:13:13.02:67,0,13	0/1:7,8:15:7.20:102,0,7	0/1:6,5:11:8.04:87,0,8	1/1:6,14:20:39.48:266,39,0	1/1:9,10:19:28.85:186,29,0	1/1:5,17:23:27.14:268,27,0	1/1:3,4:7:8.92:62,9,0
chr10	67872605	.	CCAGT	C	2832.98	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.643;DP=789;FS=0.000;HRun=0;HaplotypeScore=128.0936;InbreedingCoeff=0.9991;MQ=86.74;MQ0=0;MQRankSum=-6.031;QD=37.28;ReadPosRankSum=3.261;VQSLOD=3.6632;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,53:59:99:2271,120,0	0/0:10,0:10:30.10:0,30,786	0/0:28,0:28:75.21:0,75,1812	0/0:27,0:27:75.20:0,75,1577	1/1:0,17:17:36.12:684,36,0	0/0:24,0:24:72.25:0,72,1841	0/0:29,0:29:87.30:0,87,2231	0/0:28,0:28:75.22:0,75,1860	0/0:29,0:29:87.28:0,87,2216	0/0:32,0:32:93.32:0,93,2465	0/0:17,0:17:51.18:0,51,1312	0/0:24,0:24:69.24:0,69,1806	0/0:27,0:27:78.27:0,78,2010	0/0:44,0:44:99:0,126,3321	0/0:34,0:34:96.33:0,96,2553	0/0:26,0:26:75.26:0,75,1964	0/0:27,0:27:81.28:0,81,2168	0/0:24,0:24:69.24:0,69,1860	0/0:19,0:19:57.20:0,57,1505	0/0:22,0:22:54.19:0,54,1457	0/0:61,0:61:99:0,172,4516	0/0:30,0:30:90.30:0,90,2320	0/0:21,0:21:60.21:0,60,1581	0/0:34,0:34:99:0,99,2607	0/0:18,0:18:54.19:0,54,1458	0/0:39,0:39:99:0,114,2967	0/0:30,0:30:84.27:0,84,2166	0/0:9,0:9:27.09:0,27,729
chr10	67873789	.	G	GA	1013.49	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-6.812;DP=639;FS=11.585;HRun=9;HaplotypeScore=71.3741;InbreedingCoeff=0.9366;MQ=73.13;MQ0=1;MQRankSum=-3.116;QD=24.13;ReadPosRankSum=-0.966;VQSLOD=3.4392;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:86.96:0,87,755	0/0:12,0:12:29.99:0,30,260	0/0:22,0:21:38.58:0,39,301	0/0:12,0:12:7.01:0,7,138	0/0:21,0:21:59.99:0,60,521	0/0:20,0:20:53.99:0,54,469	0/0:16,0:16:41.96:0,42,360	0/0:32,0:32:83.93:0,84,722	0/0:22,0:22:50.98:0,51,442	0/0:22,0:22:59.99:0,60,521	0/0:18,1:19:11.81:0,12,331	0/0:25,0:25:62.96:0,63,547	0/0:18,0:18:50.99:0,51,443	0/0:19,0:19:56.99:0,57,495	0/0:25,0:25:53.95:0,54,461	0/0:26,0:26:71.98:0,72,625	0/0:31,1:32:41.83:0,42,588	0/0:35,0:35:65.92:0,66,567	0/0:23,0:23:56.98:0,57,495	0/0:25,0:25:71.95:0,72,621	0/0:22,0:22:50.97:0,51,443	0/0:26,0:26:68.58:0,69,599	0/0:23,0:23:26.47:0,26,389	0/0:17,0:17:38.96:0,39,335	0/0:25,0:25:68.96:0,69,594	1/1:5,30:35:44.13:934,44,0	0/0:24,0:24:65.01:0,65,552	1/1:0,7:7:18.05:199,18,0
chr10	67873805	.	A	AT	4521.08	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-11.914;DP=630;FS=10.707;HRun=1;HaplotypeScore=63.7618;InbreedingCoeff=0.9948;MQ=72.48;MQ0=1;MQRankSum=-0.460;QD=37.99;ReadPosRankSum=-0.553;VQSLOD=4.3715;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:96.28:0,96,1209	1/1:1,7:8:21.07:314,21,0	0/0:20,0:19:45.23:0,45,509	0/0:9,0:9:16.96:0,17,166	0/0:23,0:23:69.19:0,69,863	0/0:21,0:21:63.16:0,63,773	0/0:16,0:16:48.14:0,48,607	1/1:3,35:38:99:1458,105,0	0/0:24,0:24:72.20:0,72,880	0/0:29,0:29:87.26:0,87,1103	0/0:17,0:17:48.13:0,48,594	0/0:21,0:21:63.19:0,63,792	0/0:19,0:19:57.16:0,57,708	0/0:20,0:20:60.14:0,60,743	0/0:20,0:20:57.14:0,57,675	0/0:28,0:28:81.26:0,81,1049	1/1:1,36:37:99:1450,99,0	1/1:0,36:36:87.29:1299,87,0	0/0:19,0:19:57.16:0,57,703	0/0:24,0:24:72.22:0,72,908	0/0:18,0:18:48.15:0,48,609	0/0:24,0:24:69.19:0,69,844	0/0:16,0:16:45.13:0,45,565	0/0:11,0:11:33.08:0,33,398	0/0:25,0:25:75.21:0,75,923	0/0:35,0:35:93.28:0,93,1170	0/0:32,0:32:96.28:0,96,1211	0/0:7,0:7:21.07:0,21,271
chr10	67875532	.	TGG	T	1142.39	PASS	AB=0.890;AC=20;AF=0.357;AN=56;BaseQRankSum=2.305;DP=384;FS=17.703;HRun=12;HaplotypeScore=52.9212;InbreedingCoeff=0.5270;MQ=83.03;MQ0=0;MQRankSum=2.664;QD=7.42;ReadPosRankSum=7.379;VQSLOD=-0.6578;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:11,9:20:27.05:274,27,0	0/0:5,0:5:2.97:0,3,20	0/0:17,1:17:11.89:0,12,223	0/1:13,1:12:34.48:34,0,58	1/1:6,5:11:5.97:61,6,0	0/0:10,0:10:11.98:0,12,112	0/0:21,0:30:36.53:0,37,439	0/1:11,0:11:0:0,0,0	0/1:8,2:14:20.81:44,0,21	0/0:11,0:11:8.06:0,8,88	0/0:11,0:12:3.01:0,3,32	0/0:16,0:16:21.03:0,21,252	1/1:6,9:15:24.03:244,24,0	0/0:14,0:14:15.03:0,15,173	0/0:13,0:16:23.56:0,24,277	0/0:8,0:14:14.99:0,15,147	0/1:21,2:25:21.94:22,0,345	0/0:18,0:22:18:0,18,203	0/0:5,0:5:3.01:0,3,42	0/0:8,0:8:3:0,3,25	0/0:13,0:13:6.01:0,6,65	1/1:2,4:6:12.02:122,12,0	1/1:2,3:7:8.76:73,9,0	1/1:5,9:16:29.51:268,30,0	0/0:15,0:20:8.99:0,9,90	1/1:5,7:12:14.99:153,15,0	0/0:12,0:16:6.01:0,6,69	1/1:2,1:3:3:31,3,0
chr10	67876033	.	TTTTG	T	9219.23	PASS	AB=1.000;AC=31;AF=0.554;AN=56;BaseQRankSum=16.054;DP=848;FS=2.950;HRun=0;HaplotypeScore=165.6649;InbreedingCoeff=0.6987;MQ=63.33;MQ0=5;MQRankSum=1.470;QD=16.12;ReadPosRankSum=0.967;VQSLOD=4.7032;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:63.21:0,63,1498	1/1:4,17:21:44.86:725,45,0	0/0:25,0:19:9.02:0,9,145	0/1:27,0:21:7.67:8,0,199	0/0:21,0:21:33.58:0,34,750	1/1:24,0:24:34.15:519,34,0	0/1:35,0:35:43.82:407,0,44	1/1:22,20:40:51.09:703,51,0	0/0:11,0:23:24.08:0,24,410	1/1:46,0:44:22.54:625,23,0	1/1:34,0:34:25.84:496,26,0	1/1:31,0:31:69.16:717,69,0	0/0:26,0:26:57.16:0,57,1265	0/1:22,0:20:0.93:267,0,1	1/1:32,0:32:36.17:577,36,0	0/1:41,0:41:26.25:604,0,26	1/1:11,25:36:45.15:725,45,0	1/1:6,18:23:42.05:676,42,0	1/1:23,0:18:24.04:242,24,0	1/1:42,0:42:56.14:740,56,0	0/1:31,0:31:1.85:336,0,2	0/0:37,1:38:41.91:0,42,1866	0/0:31,0:31:66.21:0,66,1531	0/0:24,0:24:54.17:0,54,1200	1/1:23,0:20:27.06:283,27,0	0/0:33,0:33:72.23:0,72,1641	1/1:37,0:35:34.41:569,34,0	0/0:16,0:15:42.12:0,42,959
chr10	67876061	.	GTTTT	G	13601.34	PASS	AB=1.000;AC=30;AF=0.536;AN=56;BaseQRankSum=16.093;DP=819;FS=19.521;HRun=6;HaplotypeScore=131.1262;InbreedingCoeff=0.6996;MQ=58.09;MQ0=11;MQRankSum=3.320;QD=25.52;ReadPosRankSum=7.517;VQSLOD=0.6536;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:90.11:0,90,1930	0/1:20,0:20:37.56:272,0,38	0/0:14,0:8:21.05:0,21,295	0/0:21,0:12:25.96:0,26,393	0/0:21,0:21:55.22:0,55,1007	1/1:1,33:34:51.17:950,51,0	1/1:3,33:36:42.14:779,42,0	0/1:37,0:34:99:241,0,340	0/0:27,0:25:60.09:0,60,800	1/1:3,34:35:99:1493,99,0	1/1:1,21:22:56.66:926,57,0	1/1:0,33:33:69.24:1286,69,0	0/0:35,0:35:99:0,99,1891	1/1:1,25:24:30.10:540,30,0	1/1:1,36:37:57.19:1043,57,0	1/1:3,31:33:6.82:1149,7,0	0/1:35,0:35:99:269,0,161	0/1:31,0:30:99:231,0,257	1/1:3,26:26:74.89:848,75,0	1/1:2,33:35:92.83:1413,93,0	1/1:3,25:28:27.15:659,27,0	0/0:36,0:36:74.86:0,75,2249	0/0:26,0:25:75.23:0,75,1847	0/0:29,0:29:87.13:0,87,1654	1/1:1,24:22:27.09:503,27,0	0/0:33,0:33:99:0,99,2117	1/1:0,34:33:55.33:1001,55,0	0/0:14,0:14:39.13:0,39,1065
chr10	67876237	.	TTGA	T	579.17	PASS	AB=0.889;AC=3;AF=0.054;AN=56;BaseQRankSum=8.619;DP=900;FS=11.313;HRun=0;HaplotypeScore=137.3468;InbreedingCoeff=0.6478;MQ=55.25;MQ0=4;MQRankSum=-6.055;QD=10.73;ReadPosRankSum=1.037;VQSLOD=3.0228;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:21,3:24:28.99:234,0,29	0/0:13,0:13:30.07:0,30,532	0/0:35,0:28:63.69:0,64,990	0/0:39,0:24:59.05:0,59,932	1/1:27,3:30:32.20:451,32,0	0/0:32,0:32:87.28:0,87,1808	0/0:27,0:27:69.24:0,69,1403	0/0:41,0:38:99:0,102,1969	0/0:29,0:29:78.27:0,78,1619	0/0:44,0:43:99:0,120,2329	0/0:19,0:19:45.15:0,45,927	0/0:43,0:43:99:0,117,2379	0/0:36,0:36:99:0,99,1916	0/0:30,0:30:87.16:0,87,1718	0/0:34,0:34:84.36:0,84,1831	0/0:35,0:35:99:0,99,2061	0/0:50,0:50:99:0,129,2489	0/0:23,0:21:57.15:0,57,1155	0/0:23,0:20:45.15:0,45,849	0/0:30,0:30:72.25:0,72,1527	0/0:46,0:45:99:0,123,2393	0/0:32,0:32:84.26:0,84,1642	0/0:29,0:29:75.14:0,75,1498	0/0:54,0:53:99:0,132,2556	0/0:22,0:22:45.15:0,45,925	0/0:26,0:26:72.22:0,72,1341	0/0:35,0:35:99:0,102,1930	0/0:19,0:19:57.20:0,57,1223
chr10	67876243	.	A	ATGTTGT	1623.91	PASS	AB=0.955;AC=3;AF=0.054;AN=56;BaseQRankSum=9.545;DP=910;FS=1.188;HRun=0;HaplotypeScore=191.0069;InbreedingCoeff=0.6527;MQ=55.32;MQ0=4;MQRankSum=-6.846;QD=33.14;ReadPosRankSum=-1.900;VQSLOD=2.9074;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:20,1:21:18.37:591,0,18	0/0:11,0:11:30.09:0,30,625	0/0:43,0:31:22.11:0,22,1144	0/0:41,0:26:62.91:0,63,1133	1/1:20,8:28:74.60:1140,75,0	0/0:31,0:31:90.26:0,90,1988	0/0:27,0:27:75.17:0,75,1512	0/0:39,0:37:99:0,105,2139	0/0:33,0:33:90.20:0,90,1807	0/0:50,0:49:99:0,141,2922	0/0:21,0:21:54.13:0,54,1122	0/0:41,0:41:99:0,117,2566	0/0:38,0:38:99:0,108,2154	0/0:31,0:31:90.18:0,90,1869	0/0:36,0:36:79.47:0,79,2120	0/0:37,0:37:99:0,102,2228	0/0:53,0:53:99:0,144,2910	0/0:23,0:21:60.06:0,60,1314	0/0:19,0:17:50.78:0,51,822	0/0:30,0:30:78.21:0,78,1691	0/0:43,0:42:99:0,123,2478	0/0:32,0:32:89.96:0,90,1810	0/0:27,0:27:77.85:0,78,1608	0/0:53,0:52:99:0,135,2688	0/0:19,0:19:48.13:0,48,988	0/0:26,0:26:75.20:0,75,1466	0/0:36,0:36:99:0,108,2103	0/0:21,0:21:63.22:0,63,1463
chr10	67876249	.	T	TTGA	594.99	PASS	AB=0.958;AC=3;AF=0.054;AN=56;BaseQRankSum=7.543;DP=930;FS=0.000;HRun=0;HaplotypeScore=149.4326;InbreedingCoeff=0.6608;MQ=55.26;MQ0=4;MQRankSum=-3.573;QD=11.23;ReadPosRankSum=-1.703;VQSLOD=2.7157;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:22,1:22:12.39:169,0,12	0/0:10,0:10:27.09:0,27,412	0/0:46,0:33:63.16:0,63,900	0/0:44,0:30:54.91:0,55,823	1/1:23,7:30:15.88:529,16,0	0/0:31,0:31:87.16:0,87,1247	0/0:27,0:27:60.18:0,60,876	0/0:43,0:41:99:0,105,1423	0/0:36,0:36:93.18:0,93,1311	0/0:50,0:49:99:0,141,2071	0/0:23,0:23:66.12:0,66,860	0/0:42,0:42:99:0,114,1651	0/0:39,0:39:99:0,102,1457	0/0:31,0:31:84.26:0,84,1260	0/0:35,0:35:99:0,99,1383	0/0:35,0:35:96.27:0,96,1452	0/0:52,0:52:99:0,130,1891	0/0:24,0:22:60.06:0,60,825	0/0:21,0:21:42.07:0,42,555	0/0:29,0:29:81.22:0,81,1161	0/0:40,0:39:99:0,99,1413	0/0:31,0:31:81.21:0,81,1142	0/0:27,0:27:63.17:0,63,927	0/0:53,0:52:94.54:0,95,1548	0/0:19,0:19:48.10:0,48,652	0/0:27,0:27:69.05:0,69,917	0/0:39,0:39:99:0,102,1418	0/0:23,0:23:69.20:0,69,1013
chr10	67876594	.	A	ATTG	10121.62	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=-3.213;DP=919;FS=0.989;HRun=0;HaplotypeScore=126.5453;InbreedingCoeff=0.9169;MQ=62.65;MQ0=0;MQRankSum=-3.738;QD=36.41;ReadPosRankSum=1.477;VQSLOD=5.8301;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,33:38:66.16:1360,66,0	1/1:4,15:19:36.59:756,37,0	0/0:38,0:38:93.18:0,93,1286	0/0:38,0:33:30.63:0,31,702	1/1:2,32:34:92.99:1749,93,0	0/0:29,0:29:84.24:0,84,1220	0/0:43,0:43:99:0,114,1615	1/1:5,27:33:84.18:1517,84,0	1/1:3,26:29:57.19:1180,57,0	0/0:43,0:43:99:0,111,1604	0/0:22,0:22:60.19:0,60,892	0/0:34,0:34:96.27:0,96,1384	0/0:38,0:38:87.17:0,87,1215	0/0:34,0:34:90.23:0,90,1264	0/0:49,0:49:99:0,123,1791	0/0:42,0:42:99:0,120,1742	1/1:8,38:49:59.36:1789,59,0	1/1:5,24:29:32.54:797,33,0	0/0:17,0:17:39.04:0,39,504	0/0:21,0:21:57.16:0,57,807	0/0:34,0:34:83.17:0,83,1087	0/0:28,0:28:75.20:0,75,1057	0/0:18,0:18:48.11:0,48,703	0/0:51,0:51:99:0,129,1871	0/0:28,0:28:66.19:0,66,949	0/1:28,0:28:17.35:551,0,17	0/0:34,0:34:93.30:0,93,1397	1/1:19,0:19:30.10:422,30,0
chr10	67876601	.	T	TTGG	6806.53	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=10.950;DP=904;FS=0.000;HRun=0;HaplotypeScore=140.6094;InbreedingCoeff=0.7565;MQ=66.76;MQ0=0;MQRankSum=-2.878;QD=25.49;ReadPosRankSum=3.056;VQSLOD=4.9724;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:37,0:37:20.32:775,20,0	1/1:19,0:19:14.15:448,14,0	0/0:41,0:41:78.34:0,78,1348	0/0:33,0:30:29.71:0,30,843	0/1:36,0:36:7.04:934,0,7	0/0:32,0:32:93.27:0,93,1367	0/0:43,0:43:99:0,113,1692	0/1:33,0:33:33.09:777,0,33	1/1:28,0:28:57.12:713,57,0	0/0:43,0:43:99:0,105,1580	0/0:20,0:20:57.18:0,57,869	0/0:35,0:35:99:0,99,1499	0/0:35,0:35:90.27:0,90,1335	0/0:33,0:33:87.27:0,87,1310	0/0:45,0:45:99:0,126,1903	0/0:42,0:42:99:0,108,1687	0/1:49,0:49:6.69:1028,0,7	1/1:25,0:25:33.99:485,34,0	0/0:22,0:22:42.04:0,42,585	0/0:22,0:22:57.15:0,57,825	0/0:36,0:36:75.20:0,75,1083	0/0:29,0:29:78.26:0,78,1189	0/0:18,0:18:51.15:0,51,754	0/0:51,0:51:99:0,123,1876	0/0:22,0:22:57.19:0,57,891	1/1:7,16:24:51.14:996,51,0	0/0:34,0:34:93.31:0,93,1432	1/1:1,15:16:30.10:649,30,0
chr10	67879248	.	CATGT	C	9033.83	PASS	AB=1.000;AC=33;AF=0.611;AN=54;BaseQRankSum=6.218;DP=826;FS=2.562;HRun=0;HaplotypeScore=150.9996;InbreedingCoeff=0.8896;MQ=73.04;MQ0=5;MQRankSum=2.730;QD=16.67;ReadPosRankSum=1.860;VQSLOD=4.6533;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:39,0:39:23.12:436,23,0	0/0:7,0:13:18.05:0,18,286	./.	0/0:20,0:19:1.25:0,1,3	0/1:35,0:35:15.89:256,0,16	1/1:11,14:25:18.06:280,18,0	0/0:22,0:22:36.12:0,36,815	0/0:38,0:37:30.03:0,30,339	1/1:35,0:35:56.28:518,56,0	0/0:34,0:34:36.11:0,36,733	0/0:21,0:21:39.09:0,39,799	1/1:12,22:34:51.17:790,51,0	1/1:14,16:29:33.11:514,33,0	1/1:16,20:36:36.12:561,36,0	1/1:19,25:44:45.02:701,45,0	1/1:11,14:26:39.13:588,39,0	0/0:11,0:20:18.06:0,18,332	0/0:18,0:36:39.11:0,39,648	1/1:18,5:22:15.04:212,15,0	1/1:14,17:31:42.10:627,42,0	1/1:13,21:33:42.14:654,42,0	1/1:10,13:23:23.87:373,24,0	1/1:15,16:31:33.11:514,33,0	1/1:12,16:28:33.11:514,33,0	1/1:13,20:33:48.16:747,48,0	0/0:29,0:29:60.19:0,60,1309	1/1:12,23:35:48.16:747,48,0	0/0:18,0:17:33.10:0,33,724
chr10	67879281	.	ATGT	A	702.67	PASS	AB=0.979;AC=14;AF=0.250;AN=56;BaseQRankSum=16.154;DP=794;FS=4.139;HRun=0;HaplotypeScore=155.1234;InbreedingCoeff=-0.3214;MQ=66.06;MQ0=8;MQRankSum=2.779;QD=1.67;ReadPosRankSum=14.249;VQSLOD=-0.4950;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:39.81:0,40,263	0/0:13,0:13:36.12:0,36,575	0/0:21,0:18:54.18:0,54,736	0/0:18,0:15:41.97:0,42,548	0/0:31,0:31:34.67:0,35,304	0/1:24,0:24:5.22:5,0,300	0/0:27,0:27:78.26:0,78,1457	0/0:50,0:49:99:0,147,2303	0/1:22,16:38:99:407,0,373	0/0:18,0:18:54.18:0,54,1131	0/0:20,0:20:60.20:0,60,1210	0/1:30,0:30:67.55:68,0,212	0/1:25,0:24:29.12:29,0,333	0/1:33,0:33:25.54:26,0,424	0/1:31,0:31:62.79:63,0,166	0/1:31,0:31:26.57:27,0,544	0/0:28,0:28:69.23:0,69,1062	0/0:31,0:31:75.23:0,75,1216	0/0:17,0:15:11.47:0,11,373	0/1:27,0:27:33.97:34,0,380	0/1:37,0:37:30.30:30,0,505	0/1:26,0:26:6.83:7,0,411	0/1:24,0:24:35.20:35,0,258	0/1:32,0:32:14.13:14,0,513	0/1:30,0:30:56.11:56,0,306	0/0:31,0:31:93.31:0,93,1971	0/1:33,0:33:56.22:56,0,290	0/0:21,0:21:63.21:0,63,1191
chr10	67879285	.	ATGTAT	A	566.48	PASS	AB=0.709;AC=1;AF=0.018;AN=56;BaseQRankSum=6.803;DP=800;FS=14.123;HRun=0;HaplotypeScore=187.7761;InbreedingCoeff=-0.0184;MQ=67.27;MQ0=7;MQRankSum=-5.558;QD=14.53;ReadPosRankSum=1.184;VQSLOD=2.0449;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:49.34:0,49,376	0/0:13,0:13:36.11:0,36,729	0/0:22,0:19:54.18:0,54,844	0/0:20,0:17:44.95:0,45,658	0/0:32,0:32:41.11:0,41,403	0/0:26,0:26:35.94:0,36,493	0/0:27,0:27:81.28:0,81,1889	0/0:50,0:49:99:0,147,2657	0/1:23,16:39:99:641,0,127	0/0:18,0:18:54.18:0,54,1429	0/0:20,0:20:60.20:0,60,1551	0/0:32,0:32:36.45:0,36,425	0/0:27,0:26:41.31:0,41,550	0/0:29,0:29:32.70:0,33,390	0/0:30,0:30:22.12:0,22,243	0/0:30,0:30:28.71:0,29,641	0/0:27,0:27:66.21:0,66,1254	0/0:30,0:30:72.25:0,72,1561	0/0:17,0:16:37.99:0,38,512	0/0:28,0:28:42.24:0,42,537	0/0:38,0:38:54.76:0,55,725	0/0:28,0:28:46.78:0,47,610	0/0:25,0:25:32.18:0,32,365	0/0:32,0:32:50.29:0,50,661	0/0:30,0:30:37.64:0,38,464	0/0:32,0:32:96.33:0,96,2568	0/0:30,0:30:31.62:0,32,377	0/0:19,0:19:57.19:0,57,1433
chr10	67879290	.	TGTAA	T	3854.57	PASS	AB=0.998;AC=19;AF=0.339;AN=56;BaseQRankSum=17.169;DP=814;FS=0.000;HRun=0;HaplotypeScore=160.5095;InbreedingCoeff=-0.1951;MQ=70.62;MQ0=6;MQRankSum=0.431;QD=7.33;ReadPosRankSum=9.592;VQSLOD=1.4609;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:4,50:54:45.09:814,45,0	0/0:11,0:11:27.06:0,27,415	0/0:24,0:21:57.50:0,58,595	0/0:21,0:18:47.06:0,47,390	1/1:1,29:30:30.03:530,30,0	0/1:27,0:27:66.64:67,0,261	0/0:29,0:29:87.07:0,87,1364	0/0:47,0:46:99:0,127,1352	0/1:33,0:33:62.30:62,0,258	0/0:21,0:21:57.14:0,57,1013	0/0:20,0:20:54.10:0,54,1057	0/1:31,1:32:99:303,0,151	0/1:27,0:26:99:157,0,232	0/1:30,0:30:99:173,0,198	0/1:33,0:33:99:228,0,140	0/1:30,0:30:99:157,0,321	0/0:29,0:29:72.05:0,72,903	0/0:31,0:31:69.03:0,69,1019	0/1:17,0:17:31.81:32,0,286	0/1:29,0:29:99:205,0,208	0/1:37,0:37:99:197,0,326	0/1:28,0:28:96.92:97,0,321	0/1:25,0:25:99:169,0,163	0/1:33,0:33:99:151,0,333	0/1:31,0:31:99:231,0,215	0/0:34,0:34:96.26:0,96,1882	0/1:30,0:30:99:281,0,112	0/0:21,0:21:60.08:0,60,1064
chr10	67882546	.	C	CACCA	1566.70	PASS	AB=1.000;AC=23;AF=0.426;AN=54;BaseQRankSum=-3.152;DP=175;FS=6.838;HRun=0;HaplotypeScore=37.2475;InbreedingCoeff=0.6845;MQ=77.05;MQ0=8;MQRankSum=-2.345;QD=20.09;ReadPosRankSum=1.377;VQSLOD=1.6431;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,6:8:3:80,3,0	./.	0/0:12,0:9:23.54:0,24,258	0/0:11,0:9:13.12:0,13,115	1/1:0,0:4:9.02:148,9,0	0/0:5,0:5:12.03:0,12,150	0/0:6,0:6:14.69:0,15,205	1/1:1,0:10:30.07:346,30,0	1/1:2,0:3:5.98:57,6,0	0/0:6,0:6:13.76:0,14,176	0/0:1,0:1:3:0,3,26	0/0:4,0:4:12.04:0,12,195	1/1:0,0:5:9.03:112,9,0	0/0:7,0:6:18.06:0,18,282	0/0:4,0:3:9.03:0,9,123	0/0:9,0:9:22.54:0,23,334	1/1:1,7:11:14.91:337,15,0	1/1:2,0:10:23.52:295,24,0	0/0:9,0:8:20.54:0,21,308	0/0:2,0:2:6.02:0,6,104	0/0:14,0:12:6.96:0,7,340	1/1:1,5:6:6.02:118,6,0	1/1:0,0:4:9.03:156,9,0	1/1:0,8:9:3.01:82,3,0	0/0:3,0:3:6.02:0,6,104	0/1:5,0:5:15.82:16,0,30	0/0:3,0:3:9.01:0,9,106	1/1:1,0:1:2.60:10,3,0
chr10	67883294	.	G	GTTGT	4662.27	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-8.949;DP=804;FS=4.410;HRun=0;HaplotypeScore=131.2637;InbreedingCoeff=0.9981;MQ=70.02;MQ0=3;MQRankSum=-0.634;QD=40.90;ReadPosRankSum=-0.640;VQSLOD=4.8496;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:46:99:0,111,1697	0/0:11,0:11:21.07:0,21,344	0/0:39,0:33:45.10:0,45,636	0/0:23,0:22:36.05:0,36,496	0/0:32,0:32:72.24:0,72,1157	0/0:24,0:24:48.16:0,48,780	0/0:31,0:31:69.11:0,69,1065	0/0:33,0:33:48.14:0,48,732	0/0:37,0:36:84.26:0,84,1320	0/0:39,0:39:93.30:0,93,1455	0/0:15,0:15:36.12:0,36,584	0/0:30,0:30:69.22:0,69,1100	1/1:11,18:31:57.20:1379,57,0	0/0:25,0:25:42.13:0,42,664	0/0:25,0:25:63.16:0,63,953	0/0:34,0:34:72.22:0,72,1127	0/0:34,0:34:75.23:0,75,1175	0/0:23,0:23:45.11:0,45,678	0/0:27,0:27:36.10:0,36,547	0/0:27,0:27:63.01:0,63,941	0/0:30,0:30:69.18:0,69,1067	1/1:10,19:29:60.12:1221,60,0	1/1:9,13:25:36.12:818,36,0	1/1:6,22:28:51.18:1244,51,0	0/0:23,0:23:57.19:0,57,927	0/0:30,0:30:69.20:0,69,1095	0/0:35,0:35:75.24:0,75,1182	0/0:15,0:14:24.03:0,24,314
chr10	67884975	.	T	TG	4706.68	PASS	AB=0.977;AC=29;AF=0.518;AN=56;BaseQRankSum=-8.226;DP=619;FS=21.669;HRun=1;HaplotypeScore=169.0781;InbreedingCoeff=0.2498;MQ=68.10;MQ0=10;MQRankSum=3.254;QD=10.87;ReadPosRankSum=-0.027;VQSLOD=1.5260;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:31.73:0,32,178	1/1:6,1:7:14.99:151,15,0	0/0:19,0:14:29.78:0,30,312	0/0:17,0:13:19.02:0,19,213	0/0:25,0:25:54.74:0,55,286	0/1:21,0:21:8.71:41,0,9	0/1:16,1:17:3.06:96,0,3	1/1:34,1:35:93.33:748,93,0	1/1:19,0:18:42:414,42,0	0/1:22,1:23:32.78:79,0,33	0/1:23,1:24:32.81:86,0,33	1/1:13,1:14:10.09:146,10,0	0/0:14,0:14:25.25:0,25,136	0/1:22,0:22:44.58:45,0,45	0/1:21,0:21:19.39:98,0,19	0/1:13,0:13:6.57:60,0,7	1/1:35,0:34:26.73:340,27,0	1/1:19,0:19:46.89:395,47,0	0/1:25,1:25:13.93:148,0,14	0/1:23,0:23:42.72:43,0,47	1/1:18,0:18:11.28:124,11,0	0/0:21,0:19:51.78:0,52,265	0/0:30,0:29:63.18:0,63,343	0/0:31,0:31:69.33:0,69,363	0/1:19,0:19:12.10:45,0,12	1/1:13,18:30:84.19:1067,84,0	0/1:30,3:34:38.26:198,0,38	1/1:1,9:10:27.09:383,27,0
chr10	67884976	.	G	GGT	6011.06	PASS	AB=0.974;AC=34;AF=0.607;AN=56;BaseQRankSum=-8.385;DP=632;FS=14.088;HRun=0;HaplotypeScore=181.9181;InbreedingCoeff=-0.3394;MQ=65.18;MQ0=11;MQRankSum=1.712;QD=10.09;ReadPosRankSum=-1.508;VQSLOD=3.5829;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:7,0:27:47.63:80,0,48	1/1:6,3:9:20.97:314,21,0	0/0:17,0:11:29.64:0,30,358	0/0:19,0:13:19.29:0,19,242	1/1:16,0:27:4.75:253,5,0	0/1:20,0:20:12.17:12,0,68	0/1:17,0:17:44.51:85,0,45	1/1:35,3:37:95.55:1201,96,0	1/1:17,7:23:53.77:817,54,0	0/1:22,0:23:30.14:30,0,117	0/1:22,0:24:45.13:45,0,108	0/1:14,0:14:22.26:112,0,22	0/1:15,0:15:7.42:35,0,7	0/1:20,0:22:35.42:35,0,121	0/1:21,0:21:76.14:76,0,85	0/1:13,0:13:43.96:44,0,45	1/1:7,29:35:10.77:732,11,0	1/1:10,11:21:51.11:838,51,0	0/1:26,0:25:72.99:106,0,73	0/1:22,0:23:23.23:23,0,112	0/1:18,0:18:13.38:98,0,13	0/1:21,0:19:17.64:42,0,18	0/1:31,0:30:35:35,0,41	0/1:31,0:31:15.34:52,0,15	0/1:19,0:19:10.33:10,0,83	1/1:30,0:29:82.40:607,82,0	0/1:34,0:34:99:100,0,137	1/1:9,1:10:26.81:228,27,0
chr10	67884984	.	T	TTG	3840.24	PASS	AB=1.000;AC=14;AF=0.250;AN=56;BaseQRankSum=-6.674;DP=638;FS=7.195;HRun=0;HaplotypeScore=198.6546;InbreedingCoeff=0.4398;MQ=56.69;MQ0=11;MQRankSum=5.032;QD=15.36;ReadPosRankSum=6.098;VQSLOD=2.6652;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:26:10.55:76,0,11	0/1:10,0:10:7.81:8,0,126	0/0:13,0:7:18.05:0,18,231	0/0:18,0:9:19.53:0,20,194	0/1:29,0:29:74.40:212,0,74	0/0:21,0:21:59.83:0,60,670	0/0:15,1:16:25.54:0,26,410	0/0:38,0:37:9.29:0,9,220	0/1:22,0:21:13.19:13,0,185	0/0:26,0:26:56.32:0,56,710	0/0:24,0:24:67.58:0,68,718	0/0:16,0:16:39.64:0,40,392	1/1:0,16:16:24.08:397,24,0	0/0:22,0:22:30.80:0,31,597	0/0:22,0:22:62.32:0,62,697	0/0:15,0:15:41.87:0,42,439	0/1:33,0:31:62.05:80,0,62	0/1:22,0:22:84.85:89,0,85	0/0:24,0:23:51.72:0,52,615	0/0:24,0:24:71.18:0,71,713	0/0:15,0:15:43.87:0,44,378	1/1:3,20:22:54.15:750,54,0	1/1:1,30:30:65.55:1020,66,0	1/1:4,31:36:80.55:1195,81,0	0/0:22,0:22:56.90:0,57,669	0/0:29,0:28:77.09:0,77,570	0/0:33,0:33:94.09:0,94,984	0/0:10,0:10:15.80:0,16,156
chr10	67884986	.	TTG	T	1475.88	PASS	AB=0.890;AC=8;AF=0.143;AN=56;BaseQRankSum=-4.983;DP=640;FS=5.348;HRun=0;HaplotypeScore=206.2451;InbreedingCoeff=-0.1703;MQ=53.67;MQ0=11;MQRankSum=1.256;QD=7.16;ReadPosRankSum=-1.331;VQSLOD=2.9989;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:25,1:25:65.53:66,0,100	0/1:10,1:11:28.24:28,0,163	0/0:12,0:6:17.87:0,18,179	0/0:17,0:7:16.53:0,17,107	0/1:24,5:29:99:176,0,327	0/0:23,0:23:65.64:0,66,753	0/0:16,0:16:47.35:0,47,468	0/1:24,15:38:93.78:575,0,94	0/1:19,4:22:99:217,0,310	0/0:27,0:27:70.76:0,71,739	0/0:24,0:24:54.20:0,54,681	0/0:14,0:14:26.49:0,26,377	0/0:17,0:17:10.75:0,11,221	0/0:24,0:24:40.36:0,40,624	0/0:22,0:22:61.26:0,61,666	0/0:14,0:14:38.33:0,38,406	0/1:31,1:30:99:182,0,160	0/1:18,4:22:99:280,0,100	0/0:25,0:24:25.19:0,25,595	0/0:24,0:24:63.27:0,63,668	0/0:17,0:17:36.16:0,36,359	0/1:24,0:22:87.41:87,0,222	0/0:30,0:29:16:0,16,557	0/0:34,0:34:51.69:0,52,761	0/0:21,0:21:55.84:0,56,630	0/0:30,0:29:64.16:0,64,694	0/0:33,0:33:45.67:0,46,846	0/0:10,0:10:24.43:0,24,273
chr10	67888256	.	GTATATATATATATATATA	G	3984.20	PASS	AB=0.770;AC=23;AF=0.548;AN=42;BaseQRankSum=2.541;DP=228;FS=9.341;HRun=0;HaplotypeScore=137.8655;InbreedingCoeff=0.0780;MQ=50.00;MQ0=4;MQRankSum=-3.636;QD=21.54;ReadPosRankSum=-0.128;VQSLOD=1.9505;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:5:2.99:0,3,24	1/1:1,2:3:6.02:294,6,0	./.	./.	0/0:3,0:6:6.49:0,6,202	0/1:4,0:13:12.68:135,0,13	0/0:3,0:3:2.37:0,2,8	1/1:32,0:31:16.19:152,16,0	1/1:3,0:3:2.68:11,3,0	0/1:8,0:9:42.82:93,0,43	0/1:6,0:11:27.94:311,0,28	./.	0/1:2,0:5:7.94:8,0,13	0/0:5,0:5:2.92:0,3,17	0/1:8,0:10:11.96:159,0,12	./.	1/1:17,3:22:20.97:544,21,0	1/1:14,3:18:9.50:598,9,0	0/1:14,0:12:6.62:60,0,7	0/0:2,0:5:3.01:0,3,38	./.	./.	0/0:2,0:2:3.01:0,3,53	./.	1/1:3,0:4:1.22:26,1,0	1/1:8,3:12:23.86:651,24,0	0/1:7,0:9:15.34:71,0,15	1/1:9,10:18:18.06:872,18,0
chr10	67889875	.	T	TCCCACA	5806.50	PASS	AB=0.741;AC=13;AF=0.232;AN=56;BaseQRankSum=-7.719;DP=680;FS=14.182;HRun=0;HaplotypeScore=137.0343;InbreedingCoeff=0.8867;MQ=60.19;MQ0=1;MQRankSum=-11.264;QD=45.72;ReadPosRankSum=-2.008;VQSLOD=3.3712;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:90.27:0,90,1866	1/1:4,11:17:33.11:1090,33,0	0/0:26,0:22:30.10:0,30,589	0/0:29,0:24:29.16:0,29,682	0/0:33,0:33:72.25:0,72,1494	0/0:18,0:18:42.11:0,42,817	0/0:16,0:16:39.13:0,39,833	1/1:21,9:30:36.12:1156,36,0	1/1:9,6:15:24.08:798,24,0	0/0:36,0:36:81.28:0,81,1732	0/0:21,0:21:45.14:0,45,922	0/0:21,0:21:51.16:0,51,1051	0/0:27,0:27:60.19:0,60,1243	0/0:30,0:30:66.20:0,66,1295	0/0:29,0:29:75.26:0,75,1591	0/0:21,0:21:45.15:0,45,949	1/1:8,5:14:12.04:400,12,0	1/1:11,9:20:30.10:1000,30,0	0/0:15,0:15:15.05:0,15,304	0/0:21,0:21:45.15:0,45,950	0/0:49,0:49:99:0,126,2618	0/0:26,0:26:60.21:0,60,1225	0/0:22,0:22:57.20:0,57,1219	0/0:29,0:29:63.22:0,63,1346	0/0:22,0:22:63.19:0,63,1291	0/1:13,7:19:34.06:862,0,34	0/0:18,0:17:45.15:0,45,946	1/1:6,4:11:15.05:500,15,0
chr10	67889993	.	A	ATGCAAGAAAAACACATG	35559.08	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-3.076;DP=685;FS=12.064;HRun=0;HaplotypeScore=250.8688;InbreedingCoeff=0.9885;MQ=59.98;MQ0=0;MQRankSum=-17.416;QD=112.89;ReadPosRankSum=0.108;VQSLOD=2.7768;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,8:36:48.16:2618,48,0	1/1:6,6:18:33.11:2177,33,0	0/0:33,0:32:86.55:0,87,2643	0/0:16,0:16:29.66:0,30,1604	1/1:10,13:32:54.18:3139,54,0	0/0:19,0:19:51.07:0,51,2389	0/0:23,0:23:69.22:0,69,2579	1/1:35,0:35:96.26:4627,96,0	1/1:6,6:20:36.12:2383,36,0	0/0:29,0:29:87.29:0,87,3848	0/0:15,0:15:42.12:0,42,1449	0/0:16,0:16:45.14:0,45,2079	1/1:5,10:23:48.16:3316,48,0	0/0:21,0:21:63.19:0,63,2715	0/0:30,0:30:90.29:0,90,4096	0/0:27,0:27:81.26:0,81,3459	1/1:2,4:14:18.06:1348,18,0	1/1:2,2:13:9.03:756,9,0	0/0:27,0:27:81.28:0,81,3202	0/0:24,0:24:72.25:0,72,3208	0/0:26,0:26:66.17:0,66,2552	1/1:6,16:38:63.22:4390,63,0	1/1:8,7:26:45.15:2393,45,0	1/1:6,7:19:30.02:1841,30,0	0/0:30,0:30:90.30:0,90,3968	1/1:9,13:33:93.30:5770,93,0	0/0:34,0:34:99:0,102,4470	1/1:3,2:8:15.05:801,15,0
chr10	67890417	.	T	TCTTTCTTTC	7612.38	PASS	AB=0.600;AC=13;AF=0.232;AN=56;BaseQRankSum=-6.401;DP=703;FS=2.037;HRun=0;HaplotypeScore=186.8705;InbreedingCoeff=0.8199;MQ=65.68;MQ0=5;MQRankSum=-9.931;QD=47.58;ReadPosRankSum=-1.666;VQSLOD=4.6142;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:51.17:0,51,1332	1/1:1,4:5:3.01:140,3,0	0/0:48,0:33:31.38:0,31,540	0/0:36,0:21:3.17:0,3,302	0/0:25,0:25:54.15:0,54,1362	0/0:21,0:20:45.14:0,45,1094	0/0:25,0:24:45.15:0,45,1242	1/1:45,0:45:97.19:2260,97,0	1/1:5,16:24:30.05:1275,30,0	0/0:32,0:32:75.17:0,75,1914	0/0:16,0:16:33.11:0,33,930	0/0:24,0:23:51.13:0,51,1240	0/0:16,0:16:42.14:0,42,1016	0/0:22,0:22:48.08:0,48,1038	0/0:28,0:28:51.16:0,51,1291	0/0:27,0:27:57.14:0,57,1445	1/1:6,13:21:9.03:313,9,0	1/1:6,9:15:15.03:489,15,0	0/0:18,0:18:39.10:0,39,829	0/0:28,0:28:60.12:0,60,1516	0/0:22,0:22:42.14:0,42,1101	0/0:17,0:17:48.12:0,48,1273	0/0:28,0:28:63.21:0,63,1630	0/0:31,0:30:66.07:0,66,1487	0/0:27,0:27:60.19:0,60,1487	0/1:12,21:34:10.84:2577,0,11	0/0:28,0:28:57.10:0,57,1488	1/1:6,6:14:12.04:558,12,0
chr10	67890431	.	C	CTTT	1961.27	PASS	AB=0.932;AC=8;AF=0.143;AN=56;BaseQRankSum=4.677;DP=665;FS=6.096;HRun=3;HaplotypeScore=128.9549;InbreedingCoeff=0.1110;MQ=60.75;MQ0=16;MQRankSum=-8.434;QD=17.20;ReadPosRankSum=-0.600;VQSLOD=0.1329;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:54.19:0,54,999	0/1:3,0:3:30.62:31,0,50	0/0:59,0:28:49.80:0,50,1016	0/0:55,0:21:40.29:0,40,570	0/0:23,0:23:60.21:0,60,1108	0/0:23,0:22:45.14:0,45,802	0/0:21,0:19:54.19:0,54,1003	0/1:21,14:35:99:882,0,584	0/1:22,1:22:99:293,0,146	0/0:31,0:30:84.28:0,84,1536	0/0:15,0:15:39.13:0,39,712	0/0:22,0:21:57.16:0,57,997	0/0:17,0:17:51.16:0,51,903	0/0:22,0:22:51.16:0,51,914	0/0:25,0:24:57.20:0,57,1055	0/0:24,0:24:65.85:0,66,1208	0/1:11,0:11:60.68:61,0,65	0/1:10,1:10:99:133,0,146	0/0:18,0:17:48.16:0,48,880	0/0:24,0:24:72.18:0,72,1279	0/0:20,0:20:48.16:0,48,876	0/0:17,0:17:51.13:0,51,899	0/0:27,0:27:75.26:0,75,1385	0/0:28,0:27:77.81:0,78,1370	0/0:33,0:33:87.19:0,87,1488	0/1:24,0:22:99:546,0,259	0/0:26,0:26:63.13:0,63,1156	1/1:6,1:7:12.04:156,12,0
chr10	67890442	.	TTCTC	T	2399.96	PASS	AB=0.761;AC=17;AF=0.327;AN=52;BaseQRankSum=-2.447;DP=688;FS=15.718;HRun=0;HaplotypeScore=136.5425;InbreedingCoeff=0.4358;MQ=55.22;MQ0=21;MQRankSum=1.485;QD=7.79;ReadPosRankSum=4.519;VQSLOD=1.4827;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:30.40:0,30,325	0/0:7,0:7:6.49:0,6,92	./.	0/1:47,0:16:0:0,0,0	0/0:26,0:26:15:0,15,159	0/1:15,6:20:41.72:42,0,43	0/1:12,1:18:33.11:33,0,35	0/0:28,0:28:11.83:0,12,76	0/0:30,0:29:21.52:0,22,297	0/1:20,10:29:14.12:324,0,14	0/0:9,0:14:11.29:0,11,57	1/1:14,6:18:9.03:141,9,0	0/0:18,0:20:38.74:0,39,467	1/1:16,10:24:15.05:235,15,0	1/1:10,16:25:24.08:377,24,0	0/1:13,8:21:29.32:218,0,29	0/0:20,0:22:37.37:0,37,573	0/0:18,0:16:20.96:0,21,230	0/0:16,0:15:0:0,0,0	1/1:12,13:25:5.85:205,6,0	0/1:7,8:15:5.19:138,0,5	0/0:17,0:19:9.03:0,9,151	0/0:27,0:27:41.83:0,42,706	0/0:26,0:28:44.09:0,44,838	1/1:16,19:34:45.11:680,45,0	0/0:39,0:35:41.84:0,42,423	0/1:13,9:22:0.95:174,0,1	./.
chr10	67890800	.	GATAC	G	4389.18	PASS	AB=0.939;AC=27;AF=0.540;AN=50;BaseQRankSum=11.455;DP=695;FS=0.000;HRun=0;HaplotypeScore=125.7493;InbreedingCoeff=0.7598;MQ=61.21;MQ0=5;MQRankSum=-0.729;QD=11.74;ReadPosRankSum=0.622;VQSLOD=4.1800;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:29:6.01:56,6,0	1/1:6,5:12:15.04:214,15,0	./.	./.	1/1:13,0:29:5.55:55,6,0	0/0:19,0:19:30.10:0,30,705	0/1:25,2:27:4.34:4,0,828	1/1:32,0:32:6.01:74,6,0	1/1:12,13:25:27.09:418,27,0	0/0:26,0:26:39.12:0,39,819	0/0:23,0:23:36.11:0,36,795	0/1:18,1:19:7.35:7,0,796	1/1:13,14:28:44.98:664,45,0	0/1:27,2:29:4.34:4,0,824	0/0:31,0:31:45.15:0,45,1048	1/1:13,11:24:21.07:325,21,0	1/1:14,7:22:17.55:259,18,0	1/1:7,27:34:72.24:1116,72,0	0/0:20,0:19:27.09:0,27,622	0/0:35,0:35:54.15:0,54,1217	0/0:35,0:35:72.25:0,72,1676	1/1:11,8:20:27.08:400,27,0	1/1:13,10:23:21.07:326,21,0	1/1:9,12:21:30.10:465,30,0	0/0:18,0:18:24.08:0,24,546	0/0:34,0:34:48.16:0,48,1108	0/0:24,0:24:42.14:0,42,978	./.
chr10	67891231	.	CT	C	2390.68	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=8.573;DP=509;FS=0.000;HRun=8;HaplotypeScore=56.9340;InbreedingCoeff=0.9925;MQ=72.62;MQ0=2;MQRankSum=0.714;QD=21.93;ReadPosRankSum=0.864;VQSLOD=3.6709;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,18:19:38.96:376,39,0	0/0:9,0:9:24.07:0,24,290	0/0:17,1:16:19.19:0,19,316	0/0:9,0:9:23.96:0,24,226	1/1:3,31:34:87.08:831,87,0	0/0:16,0:16:45.14:0,45,543	0/0:10,0:10:27.08:0,27,326	0/0:30,0:29:72.22:0,72,870	0/0:11,0:11:24.07:0,24,290	0/0:30,0:30:84.11:0,84,974	0/0:26,0:26:66.20:0,66,792	0/0:8,0:8:21.06:0,21,254	1/1:0,24:24:69.11:666,69,0	0/0:8,0:8:24.07:0,24,290	0/0:19,0:18:42.12:0,42,496	0/0:9,0:9:24.07:0,24,290	0/0:24,0:24:63.18:0,63,750	0/0:25,0:23:63.19:0,63,761	0/0:19,0:17:51.14:0,51,596	0/0:31,0:31:84.25:0,84,1003	0/0:13,0:13:36.10:0,36,424	1/1:0,8:8:23.94:213,24,0	1/1:3,13:16:33.05:318,33,0	1/1:1,7:8:18.02:174,18,0	0/0:23,0:23:69.21:0,69,834	0/0:5,0:24:57.36:0,57,309	0/0:25,0:25:69.18:0,69,809	0/0:6,0:13:20.26:0,20,124
chr10	67892100	.	ACCTT	A	6699.78	PASS	AB=1.000;AC=27;AF=0.482;AN=56;BaseQRankSum=-6.376;DP=557;FS=0.902;HRun=0;HaplotypeScore=117.5188;InbreedingCoeff=0.8903;MQ=58.21;MQ0=7;MQRankSum=4.054;QD=25.77;ReadPosRankSum=3.348;VQSLOD=4.9193;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:24:34.24:0,34,528	0/0:8,0:8:21.07:0,21,434	0/0:18,0:10:4.74:0,5,52	0/1:9,0:7:9.16:9,0,67	0/0:31,0:31:24.50:0,25,359	1/1:4,7:11:18.06:295,18,0	1/1:2,23:25:25.67:668,26,0	0/0:16,0:15:6.96:0,7,88	0/0:20,0:20:51.14:0,51,965	1/1:1,16:17:51.16:798,51,0	1/1:4,17:20:45.15:699,45,0	1/1:6,18:23:33.11:540,33,0	0/0:8,0:25:33.11:0,33,605	1/1:3,18:21:36.12:589,36,0	1/1:6,16:22:38.94:638,39,0	1/1:1,9:10:18.06:295,18,0	0/0:28,0:27:45.54:0,46,929	0/0:19,0:19:17.39:0,17,795	1/1:11,8:17:24.05:339,24,0	1/1:6,14:20:41.97:600,42,0	1/1:12,13:23:21.07:344,21,0	0/0:10,0:32:50.99:0,51,682	0/0:4,0:13:22.73:0,23,311	0/0:15,0:30:18.04:0,18,286	1/1:7,7:14:9.03:147,9,0	0/0:21,0:21:45.15:0,45,1074	1/1:4,18:22:45.15:737,45,0	0/0:10,0:10:18.06:0,18,436
chr10	67892170	.	G	GGAGA	4498.56	PASS	AB=0.950;AC=50;AF=0.962;AN=52;BaseQRankSum=-1.279;DP=555;FS=5.232;HRun=0;HaplotypeScore=147.5678;InbreedingCoeff=0.0094;MQ=56.94;MQ0=19;MQRankSum=-0.643;QD=8.91;ReadPosRankSum=-1.891;VQSLOD=3.7615;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:25:29.88:307,30,0	1/1:6,0:6:5.78:69,6,0	./.	./.	1/1:21,0:21:10.12:118,10,0	1/1:13,0:10:11.97:99,12,0	1/1:25,0:23:14.97:213,15,0	1/1:23,0:21:18.30:130,18,0	1/1:22,0:22:14.89:112,15,0	1/1:24,0:24:26.97:295,27,0	1/1:14,0:13:14.40:213,14,0	1/1:32,0:28:26.40:228,26,0	1/1:17,1:18:25.12:373,25,0	1/1:20,0:20:8.92:68,9,0	1/1:14,0:14:15.02:228,15,0	1/1:20,0:19:9.01:105,9,0	1/1:11,0:11:7.51:70,8,0	1/1:12,0:11:6.02:66,6,0	1/1:11,0:10:3.48:44,3,0	1/1:14,0:15:9.02:128,9,0	1/1:36,0:34:45.02:508,45,0	0/1:20,0:21:6.51:7,0,22	0/1:15,0:17:9.86:192,0,10	1/1:20,4:24:15:291,15,0	1/1:30,0:29:24:253,24,0	1/1:17,0:17:21.29:176,21,0	1/1:22,0:21:4.86:189,5,0	1/1:5,0:4:2.96:19,3,0
chr10	67892771	.	GC	G	22180.92	PASS	AB=0.875;AC=54;AF=0.964;AN=56;BaseQRankSum=-3.845;DP=645;FS=11.209;HRun=3;HaplotypeScore=68.0298;InbreedingCoeff=0.0034;MQ=68.23;MQ0=0;MQRankSum=-2.301;QD=34.39;ReadPosRankSum=3.371;VQSLOD=4.8941;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,42:42:99:1413,114,0	1/1:0,10:10:27.08:335,27,0	0/1:7,0:7:23.65:24,0,45	0/1:3,0:6:14.22:14,0,36	1/1:2,20:22:57.18:707,57,0	1/1:1,23:24:63.20:781,63,0	1/1:0,22:22:66.19:805,66,0	1/1:1,20:21:60.19:744,60,0	1/1:0,31:31:90.28:1115,90,0	1/1:0,23:23:66.21:817,66,0	1/1:1,7:8:24.07:294,24,0	1/1:1,29:30:84.26:1041,84,0	1/1:0,34:34:99:1227,99,0	1/1:1,35:36:99:1226,99,0	1/1:1,33:34:96.30:1190,96,0	1/1:1,23:24:66.21:818,66,0	1/1:0,22:22:60.19:744,60,0	1/1:0,29:29:87.27:1079,87,0	1/1:0,20:20:60.15:717,60,0	1/1:0,26:26:75.24:930,75,0	1/1:1,28:29:78.24:967,78,0	1/1:0,29:29:81.25:1004,81,0	1/1:1,11:12:30.09:372,30,0	1/1:0,19:19:57.18:707,57,0	1/1:0,26:26:75.24:930,75,0	1/1:0,25:25:75.22:917,75,0	1/1:0,23:23:69.22:855,69,0	1/1:0,11:11:33.10:409,33,0
chr10	67893701	.	CAGA	C	1278	PASS	AB=0.523;AC=3;AF=0.054;AN=56;BaseQRankSum=7.926;DP=627;FS=1.485;HRun=0;HaplotypeScore=87.6723;InbreedingCoeff=0.5878;MQ=75.68;MQ0=0;MQRankSum=-1.768;QD=35.50;ReadPosRankSum=-0.718;VQSLOD=4.1595;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:66.22:0,66,1416	0/0:7,0:7:15.05:0,15,331	0/0:14,0:13:5.28:0,5,379	0/0:15,0:15:27.99:0,28,498	0/0:19,0:19:57.20:0,57,1227	0/0:14,0:14:39.12:0,39,819	0/0:44,0:44:99:0,123,2638	0/0:21,0:21:60.20:0,60,1261	0/0:29,0:29:81.28:0,81,1782	0/0:22,0:22:63.22:0,63,1391	0/0:11,0:11:30.10:0,30,662	0/0:23,0:23:69.24:0,69,1498	0/0:29,0:29:81.28:0,81,1771	0/0:30,0:30:81.28:0,81,1771	0/0:22,0:22:63.21:0,63,1337	0/0:23,0:23:69.24:0,69,1505	0/0:37,0:37:99:0,99,2083	0/0:25,0:25:75.22:0,75,1609	0/0:21,0:21:63.20:0,63,1348	0/0:10,0:10:30.10:0,30,662	0/0:48,0:48:99:0,141,3062	0/0:12,0:12:36.12:0,36,774	0/0:9,0:9:24.08:0,24,530	0/0:45,0:45:99:0,126,2761	0/0:21,0:21:54.19:0,54,1192	0/1:2,21:23:63.29:915,0,63	0/0:16,0:16:48.16:0,48,1056	1/1:0,13:13:30.10:469,30,0
chr10	67894514	.	GTGTGTA	G	3050.58	PASS	AB=1.000;AC=40;AF=0.741;AN=54;BaseQRankSum=-6.254;DP=567;FS=2.931;HRun=0;HaplotypeScore=116.3439;InbreedingCoeff=-0.3783;MQ=47.47;MQ0=11;MQRankSum=1.971;QD=5.56;ReadPosRankSum=-6.842;VQSLOD=0.2335;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:24:29.94:101,0,30	1/1:10,0:10:26.89:214,27,0	0/1:16,0:5:15.86:16,0,30	0/1:22,0:8:31.38:44,0,31	1/1:14,0:14:7.99:146,8,0	1/1:20,0:20:17.40:130,17,0	0/1:24,0:23:18.12:18,0,41	1/1:24,0:23:47.40:312,47,0	1/1:24,0:23:38.55:362,39,0	0/1:22,0:22:99:142,0,408	1/1:11,0:11:2.99:24,3,0	0/1:14,0:13:69.05:69,0,164	0/1:19,0:17:99:111,0,113	0/1:17,0:17:64.93:65,0,103	1/1:32,0:32:16.14:132,16,0	0/1:20,0:20:51.08:51,0,92	./.	1/1:23,0:23:7.22:72,7,0	0/1:18,0:15:74.25:74,0,207	1/1:17,0:16:3:25,3,0	1/1:34,0:34:35.74:264,36,0	0/1:19,0:18:27.77:126,0,28	1/1:19,0:18:11.50:93,11,0	0/1:24,0:22:62.64:97,0,63	0/1:21,0:21:3.66:63,0,4	1/1:20,0:20:40.65:313,41,0	0/1:23,0:23:99:124,0,456	1/1:17,0:17:2.80:13,3,0
chr10	67894516	.	GTGTA	G	3635.96	PASS	AB=1.000;AC=41;AF=0.759;AN=54;BaseQRankSum=-5.534;DP=561;FS=1.344;HRun=0;HaplotypeScore=104.7682;InbreedingCoeff=-0.3419;MQ=47.66;MQ0=11;MQRankSum=0.467;QD=6.70;ReadPosRankSum=-6.149;VQSLOD=-0.3399;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:25:0.35:122,0,0	1/1:10,0:10:26.92:215,27,0	0/1:17,0:6:25.84:26,0,57	0/1:21,0:8:29.35:49,0,29	1/1:15,0:15:26.74:210,27,0	1/1:19,0:19:20.81:150,21,0	0/1:22,0:21:16.79:18,0,17	1/1:23,0:22:50.29:339,50,0	1/1:25,0:24:41.61:350,42,0	0/1:22,0:22:99:170,0,231	1/1:11,0:11:2.99:24,3,0	0/1:13,0:12:59.11:69,0,59	0/1:18,0:16:51.04:150,0,51	0/1:18,0:18:39.21:90,0,39	1/1:31,0:31:20.50:152,21,0	0/1:21,0:21:39.79:73,0,40	./.	1/1:22,0:22:5.98:56,6,0	0/1:21,0:17:91.56:92,0,128	1/1:16,0:15:3:25,3,0	1/1:32,0:32:35.74:264,36,0	0/1:18,0:17:0.23:149,0,0	1/1:19,0:18:14.59:118,15,0	0/1:24,0:22:13.08:144,0,13	0/1:20,0:20:3.23:63,0,3	1/1:1,19:20:40.49:338,40,0	0/1:23,0:23:99:124,0,267	1/1:3,13:16:3.01:57,3,0
chr10	67894520	.	A	ATG	1459.28	PASS	AB=0.904;AC=32;AF=0.640;AN=50;BaseQRankSum=-2.016;DP=560;FS=9.013;HRun=0;HaplotypeScore=106.7996;InbreedingCoeff=0.4029;MQ=48.69;MQ0=11;MQRankSum=2.450;QD=3.88;ReadPosRankSum=-1.622;VQSLOD=1.3112;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:23:0:0,0,0	1/1:10,0:10:0.47:1,0,0	0/0:17,0:7:13.38:0,13,107	0/0:21,0:7:11.86:0,12,91	1/1:15,0:15:5.02:30,5,0	1/1:16,2:18:6.01:63,6,0	0/1:9,15:23:0:0,0,0	1/1:22,0:21:8.85:76,9,0	0/1:24,0:23:12.51:33,0,13	1/1:7,16:23:31.55:402,32,0	./.	1/1:14,0:13:12.02:136,12,0	1/1:18,0:16:7.84:34,8,0	1/1:11,7:18:3.01:47,3,0	1/1:22,11:33:2.80:20,3,0	1/1:9,13:22:3.01:47,3,0	./.	0/0:22,0:22:2.26:0,2,12	1/1:21,0:17:18:221,18,0	./.	0/1:29,0:29:3.98:171,0,4	1/1:20,0:19:13.23:76,13,0	1/1:18,0:17:4.23:12,4,0	0/0:27,0:25:2.55:0,3,19	0/0:12,6:18:2.50:0,2,21	0/0:19,0:19:2.34:0,2,11	1/1:21,2:23:1.30:230,1,0	0/0:13,0:13:2.68:0,3,11
chr10	67894540	.	G	GTGTG	1912.61	PASS	AB=0.946;AC=36;AF=0.720;AN=50;BaseQRankSum=-0.027;DP=542;FS=5.598;HRun=0;HaplotypeScore=127.7547;InbreedingCoeff=0.2753;MQ=61.18;MQ0=8;MQRankSum=2.483;QD=4.73;ReadPosRankSum=0.938;VQSLOD=2.1234;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:20:7.04:35,7,0	1/1:6,0:6:0.47:1,0,0	0/1:22,0:11:1.09:1,0,137	0/0:32,0:19:4.65:0,5,81	1/1:15,0:15:19.36:127,19,0	1/1:12,0:12:10.78:86,11,0	0/1:27,0:26:0:0,0,0	1/1:24,0:23:11.74:101,12,0	0/1:17,0:16:27.01:33,0,27	1/1:26,0:26:32.68:198,33,0	./.	1/1:13,0:12:9.47:76,9,0	1/1:14,0:12:19.06:218,19,0	1/1:16,0:16:3.01:38,3,0	1/1:29,0:29:2.95:20,3,0	1/1:22,0:22:3.01:38,3,0	./.	0/0:20,0:20:2.46:0,2,25	1/1:18,0:16:23.02:192,23,0	./.	0/1:24,0:24:0.61:24,0,1	1/1:22,0:21:26.94:380,27,0	1/1:18,0:18:8.36:144,8,0	0/1:12,10:21:16.72:20,0,17	0/1:14,0:14:31.85:47,0,32	0/0:20,0:20:2.02:0,2,24	1/1:21,0:21:28.57:269,29,0	0/0:6,0:6:2.90:0,3,16
chr10	67895012	.	T	TC	5965.52	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-14.734;DP=649;FS=4.200;HRun=2;HaplotypeScore=61.6873;InbreedingCoeff=0.9486;MQ=88.80;MQ0=0;MQRankSum=-2.408;QD=38.99;ReadPosRankSum=-2.130;VQSLOD=4.5948;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,108,1372	1/1:0,15:15:42.14:629,42,0	0/0:24,0:23:60.19:0,60,771	0/0:23,0:24:60.02:0,60,686	0/0:23,0:23:69.21:0,69,880	0/0:26,0:26:78.25:0,78,1013	0/0:28,0:28:81.26:0,81,1052	1/1:0,36:36:99:1518,105,0	1/1:0,21:21:63.21:943,63,0	0/0:22,0:22:62.99:0,63,786	0/0:10,0:10:24.08:0,24,311	0/0:22,0:22:66.21:0,66,857	0/0:24,0:24:72.23:0,72,933	0/0:23,0:23:66.21:0,66,856	0/0:22,0:22:57.18:0,57,740	0/0:18,0:18:54.18:0,54,700	1/1:1,30:31:78.26:1169,78,0	1/1:1,15:16:39.13:584,39,0	0/0:18,0:18:48.08:0,48,576	0/0:21,0:21:51.17:0,51,659	0/0:48,0:48:99:0,141,1797	0/0:11,0:11:33.11:0,33,427	0/0:21,0:21:54.18:0,54,701	0/0:38,0:38:99:0,114,1458	0/0:16,0:16:39.13:0,39,505	1/1:3,27:30:6.36:1078,6,0	0/0:21,0:21:63.19:0,63,802	1/1:0,4:4:3.01:45,3,0
chr10	67895551	.	CAGACAG	C	7333.73	PASS	AC=38;AF=0.731;AN=52;BaseQRankSum=-4.679;DP=587;FS=2.669;HRun=0;HaplotypeScore=144.0854;InbreedingCoeff=0.8982;MQ=49.19;MQ0=25;MQRankSum=7.566;QD=20.60;ReadPosRankSum=1.467;VQSLOD=4.8131;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:22:21.04:290,21,0	0/0:5,0:5:9.03:0,9,195	0/0:27,0:9:18.02:0,18,260	0/0:47,0:16:5.62:0,6,283	1/1:18,0:18:13.86:208,14,0	1/1:20,0:20:33.06:457,33,0	1/1:29,0:27:53.22:770,53,0	0/0:45,0:41:99:0,108,1493	0/0:24,0:24:6.34:0,6,471	1/1:2,14:14:31.34:329,31,0	1/1:9,0:9:9.02:126,9,0	1/1:27,1:29:43.57:635,44,0	1/1:16,0:15:20.10:299,20,0	1/1:19,1:20:51.11:713,51,0	1/1:22,0:22:44.78:598,45,0	1/1:9,1:11:9.75:237,10,0	0/0:32,0:31:46.91:0,47,1106	0/0:28,0:28:32.93:0,33,496	1/1:3,8:10:23.62:265,24,0	./.	1/1:49,0:49:60.57:805,61,0	./.	1/1:11,0:10:11.97:140,12,0	1/1:23,0:22:14.13:234,14,0	1/1:10,0:9:15.02:199,15,0	1/1:15,0:14:38.80:455,39,0	1/1:17,0:17:32.86:416,33,0	1/1:7,1:8:8.97:159,9,0
chr10	67895561	.	C	CAG	77.65	PASS	AB=0.957;AC=6;AF=0.111;AN=54;BaseQRankSum=5.574;DP=554;FS=38.571;HRun=0;HaplotypeScore=155.4074;InbreedingCoeff=0.0535;MQ=45.87;MQ0=29;MQRankSum=-3.057;QD=0.74;ReadPosRankSum=-3.577;VQSLOD=-0.0270;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:26:11.96:0,12,95	0/0:5,0:5:8.83:0,9,55	0/0:7,0:2:3:0,3,28	0/0:26,0:6:11.78:0,12,88	0/0:15,0:14:8.57:0,9,64	0/0:22,0:22:23.26:0,23,208	0/1:24,1:23:49.51:50,0,148	0/0:37,0:32:80.09:0,80,496	0/1:25,0:25:19.12:19,0,85	0/0:15,0:13:23.17:0,23,172	0/0:10,1:11:2.26:0,2,41	0/1:25,1:26:39.52:40,0,249	0/1:17,2:18:61.43:62,0,61	0/0:13,0:13:11.68:0,12,172	0/0:18,1:19:26.51:0,27,185	0/0:13,0:13:9.01:0,9,63	0/0:36,0:35:43.28:0,43,311	0/0:26,0:26:22.36:0,22,131	0/0:11,0:10:22.53:0,23,158	1/1:10,0:10:2.99:24,3,0	0/0:50,0:50:35.85:0,36,263	./.	0/0:11,0:10:5.97:0,6,48	0/0:25,1:25:8.70:0,9,72	0/0:12,0:11:11.89:0,12,91	0/0:19,0:18:20.63:0,21,235	0/0:19,0:18:24.36:0,24,186	0/0:9,0:9:20.50:0,21,123
chr10	67895579	.	CACACACACACACACACAT	C	1418.98	PASS	AB=0.963;AC=28;AF=0.500;AN=56;BaseQRankSum=-3.405;DP=548;FS=13.756;HRun=0;HaplotypeScore=217.8249;InbreedingCoeff=0.0500;MQ=44.45;MQ0=29;MQRankSum=-1.150;QD=3.27;ReadPosRankSum=-4.125;VQSLOD=0.8464;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:23:3.48:37,3,0	1/1:6,0:6:6.01:72,6,0	0/0:11,0:2:5.95:0,6,56	0/0:20,0:3:9.01:0,9,120	1/1:15,0:14:8.86:62,9,0	0/1:19,0:19:0.01:0,0,217	0/1:23,0:21:3.99:4,0,40	0/1:26,0:19:16.30:61,0,16	1/1:27,0:27:3.01:78,3,0	0/1:15,0:12:38.34:60,0,38	0/0:11,0:11:5.99:0,6,49	0/0:24,0:24:12.33:0,12,210	1/1:23,0:22:5.36:132,5,0	0/1:16,0:16:80.29:80,0,180	0/1:17,0:17:3.23:3,0,164	0/1:14,0:14:10.91:11,0,133	1/1:36,0:35:42.39:693,42,0	0/1:5,22:27:91.91:146,0,92	0/0:11,0:11:13.72:0,14,205	0/1:11,0:11:15.18:15,0,53	0/1:57,0:57:11.13:11,0,111	0/1:14,0:13:16.07:30,0,16	1/1:9,0:8:3.47:26,3,0	1/1:27,0:26:4.73:37,5,0	0/0:11,0:10:9.03:0,9,154	0/1:25,0:23:29.33:29,0,622	0/0:17,0:16:10.60:0,11,61	0/0:9,0:9:24.43:0,24,286
chr10	67895581	.	CACACACACACACACAT	C	1890	PASS	AB=1.000;AC=34;AF=0.607;AN=56;BaseQRankSum=-1.643;DP=561;FS=7.033;HRun=0;HaplotypeScore=210.1125;InbreedingCoeff=-0.1111;MQ=45.70;MQ0=28;MQRankSum=1.367;QD=3.75;ReadPosRankSum=-3.819;VQSLOD=1.1300;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:24:9.42:70,9,0	1/1:6,0:6:3.27:14,3,0	0/0:14,0:2:5.95:0,6,72	0/0:23,0:6:10.99:0,11,112	1/1:15,0:14:6.32:49,6,0	0/1:20,0:20:6.64:7,0,143	0/1:24,0:22:24.48:48,0,24	0/1:28,0:21:1.46:136,0,1	1/1:4,21:25:2.76:116,3,0	0/1:16,0:13:7.63:96,0,8	0/1:14,0:14:47.14:58,0,47	0/1:24,0:24:36.24:76,0,36	1/1:22,0:21:29.90:247,30,0	0/1:16,0:16:73.81:133,0,74	0/1:17,0:17:19.62:20,0,111	0/1:15,0:15:44.53:118,0,45	1/1:36,0:35:28.30:454,28,0	0/1:26,0:26:76.28:107,0,76	0/1:12,0:12:6.27:6,0,100	1/1:10,0:10:6.37:69,6,0	0/1:60,0:60:12.27:12,0,69	1/1:14,0:13:8.48:79,8,0	1/1:9,0:8:3:25,3,0	1/1:25,0:24:4.48:54,4,0	0/0:11,0:10:8.97:0,9,100	0/1:25,0:23:49.86:50,0,424	0/1:17,0:16:9.92:10,0,18	0/0:9,0:9:20.69:0,21,149
chr10	67895591	.	CACACAT	C	4682.39	PASS	AB=1.000;AC=53;AF=0.946;AN=56;BaseQRankSum=1.356;DP=563;FS=7.919;HRun=0;HaplotypeScore=156.8096;InbreedingCoeff=0.3495;MQ=52.26;MQ0=25;MQRankSum=2.050;QD=8.69;ReadPosRankSum=2.308;VQSLOD=3.4921;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:23:21.39:166,21,0	1/1:7,0:7:2.99:24,3,0	0/0:24,0:8:16.72:0,17,121	0/1:32,0:15:32.28:32,0,106	1/1:15,0:14:20.64:168,21,0	1/1:18,0:18:25.18:215,25,0	1/1:24,1:24:5.82:84,6,0	1/1:19,0:16:31.57:380,32,0	1/1:23,0:23:2.97:27,3,0	1/1:15,0:12:23.87:195,24,0	1/1:13,0:13:14.99:148,15,0	1/1:18,4:22:26.69:327,27,0	1/1:22,0:21:30.70:263,31,0	1/1:19,0:19:33.27:273,33,0	1/1:12,5:17:23.99:262,24,0	1/1:19,1:20:35.93:367,36,0	1/1:29,0:28:40.95:323,41,0	1/1:24,0:24:6:69,6,0	1/1:18,0:16:32.78:260,33,0	1/1:7,0:7:12:115,12,0	1/1:64,0:64:9.19:75,9,0	1/1:12,0:11:11.95:94,12,0	1/1:10,0:9:14.97:121,15,0	1/1:21,0:20:9.58:95,10,0	1/1:10,0:9:8.98:109,9,0	1/1:22,0:20:39.77:284,40,0	1/1:17,0:16:5.95:93,6,0	1/1:11,0:11:12.83:116,13,0
chr10	67895595	.	CAT	C	5016.80	PASS	AB=1.000;AC=53;AF=0.946;AN=56;BaseQRankSum=1.897;DP=550;FS=9.117;HRun=0;HaplotypeScore=134.6678;InbreedingCoeff=0.3700;MQ=55.07;MQ0=22;MQRankSum=1.062;QD=9.56;ReadPosRankSum=2.006;VQSLOD=4.3102;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:25:24.38:189,24,0	1/1:3,0:3:2.99:24,3,0	0/0:25,0:8:16.72:0,17,121	0/1:36,0:19:33.67:34,0,165	1/1:15,0:14:21.42:169,21,0	1/1:16,0:16:26.60:196,27,0	1/1:4,21:24:6.02:78,6,0	1/1:23,0:20:43.54:481,44,0	1/1:22,0:22:3:29,3,0	1/1:15,0:12:26.87:220,27,0	1/1:11,0:11:20.96:171,21,0	1/1:18,0:18:26.61:236,27,0	1/1:21,0:20:41.58:339,42,0	1/1:17,0:17:35.73:268,36,0	1/1:17,1:18:26.95:244,27,0	1/1:19,1:20:38.87:332,39,0	1/1:26,0:26:37.36:368,37,0	1/1:23,0:23:5.93:41,6,0	1/1:19,0:17:38.81:319,39,0	1/1:8,0:8:14.97:122,15,0	1/1:5,57:62:8.25:56,8,0	1/1:10,0:9:11.95:94,12,0	1/1:10,0:9:14.97:121,15,0	1/1:22,0:21:13.70:140,14,0	1/1:9,2:10:11.98:116,12,0	1/1:4,18:20:48.69:416,49,0	1/1:2,12:14:6:86,6,0	1/1:10,0:10:17.41:127,17,0
chr10	67895922	.	T	TA	1519.87	PASS	AB=0.829;AC=21;AF=0.375;AN=56;BaseQRankSum=-0.434;DP=428;FS=4.068;HRun=13;HaplotypeScore=73.7008;InbreedingCoeff=0.4503;MQ=69.67;MQ0=2;MQRankSum=-2.497;QD=8.26;ReadPosRankSum=2.189;VQSLOD=2.9930;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,1:39:44.13:0,44,441	1/1:2,4:6:9.01:84,9,0	0/0:25,0:16:0.14:0,0,69	0/1:11,0:7:12.17:27,0,12	0/0:23,0:23:41.58:0,42,284	0/0:9,0:10:22.85:0,23,149	0/0:10,0:10:23.75:0,24,164	0/1:11,4:15:2.34:127,0,2	1/1:3,6:11:3.12:148,3,0	0/0:19,0:18:35.64:0,36,245	0/0:14,0:14:29.68:0,30,204	0/0:11,0:11:14.78:0,15,103	0/1:6,2:8:5.63:87,0,6	0/1:13,1:15:2.05:2,0,124	0/0:7,0:7:20.83:0,21,144	0/0:10,0:10:17.77:0,18,122	1/1:7,21:29:18.93:315,19,0	1/1:7,12:19:29.87:265,30,0	0/0:14,0:13:23.74:0,24,164	0/1:13,1:14:7.10:7,0,101	0/0:17,0:19:40.62:0,41,272	1/1:2,6:8:12.01:111,12,0	1/1:3,8:11:12.48:113,12,0	0/1:3,8:11:17.07:143,0,17	0/0:14,1:16:2.87:0,3,145	0/1:11,5:16:17.16:138,0,17	0/0:25,0:26:34.46:0,34,375	1/1:3,7:10:15.02:139,15,0
chr10	67896099	.	T	TAGTG	14969.31	PASS	AB=0.955;AC=27;AF=0.482;AN=56;BaseQRankSum=-16.149;DP=591;FS=7.065;HRun=0;HaplotypeScore=93.8199;InbreedingCoeff=0.9241;MQ=76.71;MQ0=0;MQRankSum=-4.089;QD=52.34;ReadPosRankSum=4.560;VQSLOD=5.6498;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:93.28:0,93,1656	0/0:8,0:8:18.06:0,18,327	0/0:24,0:24:62.48:0,62,1011	0/0:30,0:28:60.04:0,60,1033	0/0:17,0:17:42.14:0,42,763	1/1:0,13:13:36.12:943,36,0	1/1:6,21:28:54.19:1391,54,0	0/0:35,0:35:93.30:0,93,1632	0/0:21,0:21:57.20:0,57,1024	1/1:3,21:26:75.26:1861,75,0	1/1:3,13:16:27.09:707,27,0	1/1:3,12:16:21.07:550,21,0	0/0:18,0:18:48.16:0,48,873	1/1:3,28:32:81.26:2067,81,0	1/1:0,14:14:33.11:864,33,0	1/1:3,10:13:30.10:785,30,0	0/0:24,0:24:63.22:0,63,1146	0/0:26,0:26:75.24:0,75,1334	1/1:6,15:20:42.14:1100,42,0	1/1:3,7:10:15.05:392,15,0	1/1:7,31:39:75.26:1965,75,0	0/0:5,0:5:15.05:0,15,273	0/0:16,0:16:45.15:0,45,818	0/0:36,0:36:99:0,108,1895	1/1:0,11:11:30.10:785,30,0	0/1:20,1:21:15.42:15,0,1024	1/1:8,18:26:60.21:1544,60,0	0/0:11,0:11:33.11:0,33,600
chr10	67897101	.	GTGTGTGTA	G	1420.57	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=5.398;DP=671;FS=1.211;HRun=0;HaplotypeScore=180.8942;InbreedingCoeff=0.6084;MQ=58.92;MQ0=3;MQRankSum=-6.772;QD=8.56;ReadPosRankSum=0.743;VQSLOD=2.5087;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:63,0:63:12.56:0,13,71	0/0:9,0:9:27:0,27,794	0/0:22,0:12:4.98:0,5,144	0/0:22,0:18:27.55:0,28,317	1/1:22,0:22:1.88:47,2,0	0/1:23,0:23:33.32:33,0,254	0/0:24,0:24:59.78:0,60,681	0/0:37,0:34:91.90:0,92,908	0/0:17,0:17:31.36:0,31,1159	0/0:34,0:34:31.86:0,32,907	0/0:14,0:13:18.44:0,18,212	0/0:20,0:20:44.44:0,44,545	1/1:3,21:24:20.81:515,21,0	0/0:13,0:13:14.20:0,14,212	0/0:25,0:25:31.99:0,32,432	0/1:22,0:22:10.53:11,0,477	0/0:35,0:35:93.16:0,93,2591	0/0:26,0:25:57.18:0,57,1255	0/0:24,0:22:20.44:0,20,336	0/0:28,0:28:65.86:0,66,665	0/0:36,0:36:60.35:0,60,599	1/1:5,15:20:12.01:281,12,0	1/1:8,1:9:23.96:324,24,0	1/1:4,21:25:14.79:338,15,0	0/1:21,0:21:43.30:43,0,306	0/0:28,0:28:45.50:0,45,1561	0/0:23,0:23:34.16:0,34,536	0/0:5,0:4:8.99:0,9,128
chr10	67897105	.	GTGTA	G	2908.73	PASS	AB=0.993;AC=25;AF=0.446;AN=56;BaseQRankSum=13.435;DP=668;FS=1.193;HRun=0;HaplotypeScore=135.5537;InbreedingCoeff=-0.0892;MQ=58.23;MQ0=3;MQRankSum=-0.645;QD=5.85;ReadPosRankSum=6.544;VQSLOD=2.1596;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:8,51:59:2.83:387,3,0	0/0:9,0:9:26.83:0,27,470	0/0:21,0:10:4.98:0,5,144	0/0:23,0:19:27.69:0,28,283	1/1:3,20:23:15.05:223,15,0	0/1:22,1:23:99:153,0,103	0/1:26,0:26:55.99:56,0,277	0/0:36,0:33:66.84:0,67,746	0/0:18,0:18:33.93:0,34,684	0/1:35,0:35:99:125,0,460	0/1:13,0:12:4.89:5,0,104	0/1:21,0:21:99:155,0,104	1/1:24,0:24:20.71:221,21,0	0/1:13,0:13:55.77:56,0,69	0/1:24,0:24:74.85:212,0,75	0/1:24,0:24:49.41:236,0,49	0/0:36,0:36:98.08:0,98,1629	0/0:24,0:23:31.26:0,31,774	0/1:23,0:21:47.73:48,0,193	0/1:28,0:28:96.50:96,0,281	0/1:35,1:36:99:179,0,197	1/1:17,0:17:11.85:122,12,0	1/1:10,0:10:24.34:199,24,0	0/1:23,0:23:0.55:125,0,1	0/1:21,0:21:45.54:170,0,46	0/1:30,0:30:27.43:27,0,779	0/1:23,1:24:43.51:292,0,44	0/0:4,0:3:8.97:0,9,71
chr10	67897107	.	GTA	G	689.12	PASS	AB=1.000;AC=16;AF=0.286;AN=56;BaseQRankSum=7.247;DP=668;FS=6.166;HRun=0;HaplotypeScore=125.4389;InbreedingCoeff=0.4294;MQ=57.97;MQ0=3;MQRankSum=-3.252;QD=2.60;ReadPosRankSum=-1.352;VQSLOD=1.7065;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:57,2:59:2.72:160,3,0	0/0:9,0:9:26.74:0,27,297	0/0:21,0:9:4.98:0,5,144	0/0:21,0:16:28.10:0,28,284	1/1:21,1:22:14.89:113,15,0	0/0:24,0:24:12.65:0,13,165	0/0:27,0:27:54.59:0,55,374	0/0:38,0:35:64.74:0,65,742	0/0:18,0:18:33.28:0,33,467	0/1:35,0:35:34.32:34,0,498	0/1:13,0:12:23.46:23,0,108	0/0:21,0:21:3.28:0,3,146	1/1:23,0:23:20.14:138,20,0	0/1:13,0:13:1.84:2,0,61	0/0:24,0:24:29.97:0,30,199	0/0:23,0:23:23.99:0,24,182	0/0:36,0:36:86.93:0,87,1237	0/0:27,0:26:45.01:0,45,613	0/1:21,0:19:1.28:1,0,213	0/0:29,0:29:61.98:0,62,410	0/0:37,0:37:15.21:0,15,276	1/1:16,0:16:11.85:80,12,0	1/1:10,0:10:26.79:194,27,0	0/1:23,0:23:10.08:69,0,10	0/0:20,0:20:13.09:0,13,129	0/1:30,0:30:46.48:46,0,503	0/0:23,1:24:12.79:0,13,151	0/0:4,0:3:6.87:0,7,48
chr10	67897109	.	ATGTG	A	5040.75	PASS	AB=0.799;AC=36;AF=0.692;AN=52;BaseQRankSum=4.805;DP=670;FS=11.338;HRun=0;HaplotypeScore=130.3271;InbreedingCoeff=0.6023;MQ=57.05;MQ0=4;MQRankSum=1.205;QD=10.31;ReadPosRankSum=5.359;VQSLOD=3.2121;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:59,0:59:23.73:244,24,0	0/0:10,0:10:24.06:0,24,437	./.	./.	1/1:22,0:22:14.97:140,15,0	1/1:8,12:24:27.06:350,27,0	1/1:16,10:26:15.05:240,15,0	0/0:41,0:38:31.37:0,31,402	0/0:12,0:18:31.66:0,32,544	1/1:32,3:35:22.12:331,22,0	0/1:9,4:12:20.17:40,0,20	1/1:7,13:21:3.08:313,3,0	1/1:23,0:23:19.16:147,19,0	0/1:3,7:13:0.29:112,0,0	1/1:5,17:23:33.11:508,33,0	1/1:7,15:23:36.54:557,37,0	0/0:36,0:37:65.94:0,66,1363	0/1:22,1:25:8.69:9,0,621	1/1:19,2:19:9.92:123,10,0	1/1:17,12:29:21.07:336,21,0	1/1:20,17:37:23.79:381,24,0	1/1:16,0:16:8.89:76,9,0	0/1:12,0:12:34.55:35,0,55	1/1:22,0:22:14.36:109,14,0	1/1:6,12:20:27.08:392,27,0	0/0:29,0:29:41.45:0,41,721	1/1:8,16:24:39.58:601,40,0	0/0:4,0:3:3.01:0,3,48
chr10	67898336	.	G	GGA	31055.27	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-8.621;DP=687;FS=2.313;HRun=0;HaplotypeScore=72.7093;InbreedingCoeff=0.9854;MQ=79.25;MQ0=0;MQRankSum=-9.515;QD=47.70;ReadPosRankSum=5.449;VQSLOD=5.9700;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,43:47:99:2082,108,0	1/1:0,6:7:18.06:347,18,0	0/0:19,0:19:48.14:0,48,674	0/0:17,0:17:47.06:0,47,602	1/1:2,20:22:51.04:878,51,0	1/1:1,21:22:54.19:1037,54,0	1/1:0,27:28:78.27:1501,78,0	1/1:4,33:37:99:1813,102,0	1/1:0,24:24:60.21:1157,60,0	1/1:0,30:31:90.27:1618,90,0	1/1:0,14:14:30.10:572,30,0	1/1:3,30:32:72.25:1390,72,0	1/1:1,21:22:54.19:1039,54,0	1/1:0,22:22:57.20:1100,57,0	1/1:0,29:29:75.26:1448,75,0	1/1:1,27:28:75.26:1447,75,0	1/1:1,34:35:84.29:1621,84,0	1/1:2,19:21:51.17:982,51,0	1/1:0,23:23:69.24:1332,69,0	1/1:1,22:24:57.14:1037,57,0	1/1:1,41:43:99:2085,108,0	1/1:0,15:15:39.13:753,39,0	1/1:0,9:9:20.94:405,21,0	1/1:2,40:42:87.30:1680,87,0	1/1:1,22:23:66.23:1274,66,0	1/1:1,25:26:72.25:1366,72,0	1/1:0,18:17:42.14:802,42,0	1/1:0,6:6:15.05:290,15,0
chr10	67898521	.	CA	C	104.23	PASS	AB=0.887;AC=6;AF=0.107;AN=56;BaseQRankSum=-1.135;DP=428;FS=0.000;HRun=17;HaplotypeScore=116.6588;InbreedingCoeff=0.3479;MQ=36.13;MQ0=19;MQRankSum=-0.185;QD=1.41;ReadPosRankSum=0.903;VQSLOD=-0.5773;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:13,6:19:9.57:117,10,0	0/0:13,0:13:23.90:0,24,105	1/1:19,0:3:2.64:11,3,0	0/0:26,1:5:2.68:0,3,11	0/1:18,4:21:14.52:79,0,15	0/0:12,0:12:26.90:0,27,149	0/0:8,0:8:7.96:0,8,54	0/0:25,0:23:37.02:0,37,165	0/0:14,0:13:13.77:0,14,65	0/0:18,0:18:32.85:0,33,194	0/0:21,0:22:34.39:0,34,194	0/0:15,0:16:34.16:0,34,192	0/0:18,0:18:3.04:0,3,104	0/0:4,0:4:8.67:0,9,53	0/0:11,0:11:16.33:0,16,117	0/0:9,0:9:17.71:0,18,120	0/0:16,0:15:19.52:0,20,92	0/0:16,0:15:27.64:0,28,126	0/0:11,0:11:3.06:0,3,81	0/0:24,2:25:1.86:0,2,146	0/0:4,0:2:0:0,0,0	0/0:9,0:9:7.58:0,8,62	0/0:11,0:11:10.01:0,10,86	0/1:12,1:13:5.71:6,0,34	0/0:17,0:16:29.29:0,29,165	0/0:19,0:19:17.03:0,17,87	0/0:20,0:18:24.16:0,24,134	0/0:3,0:3:5.90:0,6,39
chr10	67898531	.	A	AAG	1324.25	PASS	AB=0.715;AC=7;AF=0.125;AN=56;BaseQRankSum=1.984;DP=455;FS=13.037;HRun=0;HaplotypeScore=117.4711;InbreedingCoeff=0.4193;MQ=41.04;MQ0=22;MQRankSum=-2.391;QD=14.24;ReadPosRankSum=3.720;VQSLOD=2.9947;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:21:56.76:0,57,480	1/1:1,11:13:26.59:362,27,0	0/0:25,0:6:12.78:0,13,79	0/0:33,0:7:1.76:0,2,22	0/0:28,0:27:77.60:0,78,667	0/0:14,0:13:13.54:0,14,157	0/0:10,0:10:17.73:0,18,163	0/1:23,5:30:29.33:437,0,29	1/1:7,3:12:24.90:222,25,0	0/0:22,0:21:43.14:0,43,402	0/0:23,0:22:5.87:0,6,217	0/0:14,0:13:11.84:0,12,205	0/0:13,0:13:36.02:0,36,383	0/0:7,0:6:14.96:0,15,112	0/0:12,0:11:20.79:0,21,240	0/0:8,0:8:23.80:0,24,207	0/1:14,5:17:28.99:215,0,29	0/1:4,9:15:10.68:229,0,11	0/0:10,0:10:26.45:0,26,196	0/0:24,0:23:56.53:0,57,457	0/0:2,0:2:5.92:0,6,39	0/0:9,0:9:27.03:0,27,305	0/0:12,0:12:32.99:0,33,329	0/0:12,0:12:17.88:0,18,167	0/0:17,0:16:35.90:0,36,355	0/0:20,0:20:39.43:0,39,250	0/0:22,0:20:37.78:0,38,304	0/0:3,0:3:8.93:0,9,73
chr10	67898538	.	AG	A	1323.58	PASS	AB=0.978;AC=29;AF=0.518;AN=56;BaseQRankSum=4.986;DP=454;FS=2.482;HRun=1;HaplotypeScore=107.7097;InbreedingCoeff=-0.0445;MQ=44.69;MQ0=23;MQRankSum=-4.298;QD=3.79;ReadPosRankSum=2.296;VQSLOD=0.6561;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:22,1:22:7.29:7,0,140	1/1:12,0:12:26.40:125,26,0	0/1:27,0:7:8.89:9,0,32	0/0:34,0:7:6.02:0,6,29	0/1:22,3:24:45.77:46,0,184	0/0:13,0:12:7.85:0,8,100	0/1:12,0:12:1.18:1,0,93	1/1:33,0:31:55.11:426,55,0	1/1:12,0:11:25.29:133,25,0	0/1:21,0:20:19.18:19,0,169	0/1:23,0:22:14.34:14,0,227	0/0:15,0:14:2.95:0,3,82	0/1:13,0:13:7.93:8,0,145	0/1:8,1:8:3.03:3,0,64	0/1:12,0:11:23.05:23,0,111	0/1:7,0:7:24.02:24,0,52	1/1:17,0:15:29.90:149,30,0	1/1:16,0:15:26.76:118,27,0	0/1:11,1:12:30.51:31,0,110	0/0:20,0:19:10.66:0,11,156	0/1:2,0:2:5.97:6,0,11	0/0:11,0:11:29.79:0,30,234	0/0:12,0:12:5.72:0,6,103	0/1:11,0:11:12.77:13,0,73	0/1:16,0:15:16.54:17,0,146	1/1:21,0:21:40.40:249,40,0	0/1:22,0:20:45.56:46,0,107	1/1:3,0:3:6.05:30,6,0
chr10	67898543	.	G	GA	2292.56	PASS	AB=0.974;AC=30;AF=0.536;AN=56;BaseQRankSum=-1.499;DP=462;FS=3.582;HRun=11;HaplotypeScore=108.1319;InbreedingCoeff=0.5195;MQ=46.05;MQ0=22;MQRankSum=-2.797;QD=8.13;ReadPosRankSum=0.825;VQSLOD=2.6087;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:23:41.72:0,42,309	0/0:12,0:12:17.67:0,18,132	0/1:27,0:7:10.91:11,0,43	0/0:34,0:7:2.76:0,3,8	0/0:26,0:26:13.39:0,13,355	1/1:10,4:13:26.46:192,26,0	1/1:2,11:13:18:174,18,0	0/0:30,0:28:35.16:0,35,360	0/1:11,0:10:28.22:32,0,28	1/1:15,7:21:36.52:325,37,0	1/1:15,8:22:33.47:318,33,0	1/1:13,2:14:23.79:202,24,0	0/0:13,0:13:23.54:0,24,156	1/1:5,4:8:9.48:101,9,0	1/1:10,3:12:4.96:122,5,0	1/1:3,2:5:7.83:66,8,0	0/1:17,0:15:1.04:1,0,111	0/1:16,0:15:8.11:8,0,104	0/1:9,2:11:8.94:61,0,9	1/1:8,13:20:14.08:254,14,0	1/1:2,1:2:1.82:5,2,0	0/0:12,0:12:23.79:0,24,177	0/0:14,0:14:12.70:0,13,188	0/0:10,0:10:10.30:0,10,74	1/1:10,5:15:33.66:257,34,0	0/1:22,0:22:26.31:26,0,91	1/1:17,7:22:21.13:334,21,0	0/0:5,0:5:10.99:0,11,73
chr10	67898578	.	C	CG	706.74	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=2.571;DP=423;FS=3.859;HRun=1;HaplotypeScore=115.2891;InbreedingCoeff=0.8949;MQ=69.57;MQ0=0;MQRankSum=-2.776;QD=8.22;ReadPosRankSum=-0.595;VQSLOD=0.7660;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:47.08:0,47,352	1/1:9,1:10:17.56:117,18,0	0/1:17,0:16:3.38:3,0,99	0/0:10,0:11:12.78:0,13,131	0/0:34,0:34:88.08:0,88,707	0/0:13,0:13:35.35:0,35,392	0/0:15,0:15:18.42:0,18,230	1/1:19,0:19:29.80:321,30,0	1/1:8,3:10:14.65:112,15,0	0/0:16,0:16:44.93:0,45,436	0/0:20,0:21:53.96:0,54,548	0/0:15,0:15:40.84:0,41,358	0/0:9,0:9:25.65:0,26,192	0/0:6,0:6:17.46:0,17,129	0/0:15,0:15:26.85:0,27,253	0/0:9,0:9:23.64:0,24,202	1/1:13,0:13:19.81:159,20,0	1/1:14,0:14:23.06:167,23,0	0/0:16,0:16:30.47:0,30,373	0/0:20,0:20:53.71:0,54,518	0/0:7,0:6:12:0,12,124	0/0:15,0:15:41.74:0,42,325	0/0:15,0:15:40.93:0,41,303	0/0:14,0:14:29.69:0,30,247	0/0:15,0:15:21.56:0,22,308	0/0:24,0:24:53.87:0,54,326	0/0:17,0:17:50.84:0,51,536	0/0:9,0:9:24.91:0,25,146
chr10	67898579	.	GAA	G	1825.02	PASS	AB=0.872;AC=16;AF=0.286;AN=56;BaseQRankSum=-4.733;DP=444;FS=1.617;HRun=13;HaplotypeScore=114.9052;InbreedingCoeff=0.6210;MQ=68.69;MQ0=0;MQRankSum=4.160;QD=11.06;ReadPosRankSum=2.462;VQSLOD=2.6104;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,15:20:38.49:359,38,0	0/0:9,0:10:23.97:0,24,243	0/1:15,1:16:47.56:50,0,48	0/1:13,0:12:3.69:4,0,158	1/1:8,23:34:57.05:586,57,0	0/0:12,0:14:32.37:0,32,395	0/1:12,2:15:28.19:28,0,250	0/0:8,0:27:63.19:0,63,608	0/0:10,0:12:24.01:0,24,249	0/0:12,0:16:43.05:0,43,441	0/0:20,0:21:47.05:0,47,546	0/0:14,0:16:42.37:0,42,426	1/1:3,5:9:17.04:154,17,0	0/0:6,0:6:18.04:0,18,216	0/0:11,1:15:6.17:0,6,298	0/1:7,2:10:34.69:35,0,179	0/0:3,0:16:23.99:0,24,224	0/0:10,0:14:27.86:0,28,257	0/0:14,0:16:41.61:0,42,518	0/0:20,0:20:36.98:0,37,461	0/0:5,0:6:2.86:0,3,138	1/1:3,10:15:29.72:274,30,0	1/1:3,11:15:11.26:264,11,0	1/1:0,14:14:26.94:261,27,0	0/0:16,0:17:42.08:0,42,535	0/0:5,0:25:53.51:0,54,484	0/0:16,0:17:46.38:0,46,621	0/0:6,0:9:24.41:0,24,210
chr10	67898661	.	T	TCTCC	13949.78	PASS	AB=0.567;AC=25;AF=0.446;AN=56;BaseQRankSum=-12.319;DP=522;FS=38.085;HRun=0;HaplotypeScore=97.3482;InbreedingCoeff=0.9361;MQ=82.57;MQ0=0;MQRankSum=-5.040;QD=64.28;ReadPosRankSum=0.486;VQSLOD=3.3114;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,117,2175	0/0:7,0:7:21.07:0,21,386	0/0:22,0:22:56.35:0,56,972	0/0:13,0:13:29.09:0,29,471	0/0:15,0:15:45.15:0,45,840	1/1:2,10:14:36.12:911,36,0	1/1:1,22:24:51.18:1359,51,0	0/0:24,0:24:60.20:0,60,1072	0/0:18,0:17:45.15:0,45,840	1/1:3,11:16:42.14:1072,42,0	1/1:4,6:10:24.08:587,24,0	1/1:0,13:14:36.12:918,36,0	0/0:15,0:15:45.14:0,45,803	1/1:2,18:20:57.15:1459,57,0	1/1:4,16:20:48.16:1263,48,0	0/1:4,13:17:7.87:1085,0,8	0/0:31,0:30:75.22:0,75,1311	0/0:23,0:23:63.22:0,63,1176	1/1:4,6:11:27.08:623,27,0	1/1:0,9:10:27.05:658,27,0	1/1:3,23:28:66.23:1735,66,0	0/0:16,0:16:45.15:0,45,840	0/0:17,0:17:45.15:0,45,839	0/0:34,0:34:87.30:0,87,1623	1/1:3,16:19:51.18:1330,51,0	0/0:16,0:16:48.16:0,48,865	1/1:1,12:14:36.12:950,36,0	0/0:8,0:8:21.07:0,21,392
chr10	67900521	.	T	TAC	3622.68	PASS	AB=0.526;AC=9;AF=0.161;AN=56;BaseQRankSum=-10.312;DP=749;FS=2.694;HRun=0;HaplotypeScore=87.2248;InbreedingCoeff=0.8670;MQ=59.80;MQ0=11;MQRankSum=1.253;QD=33.54;ReadPosRankSum=0.218;VQSLOD=5.3887;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:86.91:0,87,1059	0/1:1,8:10:10.44:369,0,10	0/0:58,0:23:34.74:0,35,466	0/0:55,0:19:29.86:0,30,306	0/0:31,0:32:87.08:0,87,1039	0/0:16,0:16:45.14:0,45,563	0/0:23,0:23:54.17:0,54,675	1/1:9,16:25:48.16:793,48,0	1/1:3,17:20:10.63:706,11,0	0/0:26,0:26:69.22:0,69,863	0/0:18,0:18:42.12:0,42,513	0/0:22,0:22:54.17:0,54,676	0/0:26,0:26:63.19:0,63,775	0/0:18,0:18:39.11:0,39,475	0/0:28,0:28:75.23:0,75,926	0/0:14,0:14:36.11:0,36,450	1/1:8,19:27:22.70:889,23,0	1/1:5,20:26:54.17:866,54,0	0/0:19,0:16:33.11:0,33,413	0/0:30,0:30:81.26:0,81,1013	0/0:43,0:44:99:0,108,1326	0/0:20,0:20:57.18:0,57,713	0/0:27,0:27:69.22:0,69,863	0/0:26,0:27:62.77:0,63,764	0/0:27,0:27:75.18:0,75,903	0/0:37,0:38:61.88:0,62,1081	0/0:14,0:14:33.09:0,33,399	0/0:20,0:20:42.25:0,42,626
chr10	67901169	.	AG	A	3014.28	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=10.255;DP=813;FS=3.251;HRun=1;HaplotypeScore=84.0385;InbreedingCoeff=0.9976;MQ=78.36;MQ0=0;MQRankSum=-1.376;QD=35.05;ReadPosRankSum=1.309;VQSLOD=3.7333;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:66,0:66:99:0,193,3042	1/1:0,8:8:21.07:294,21,0	0/0:25,0:25:75.20:0,75,1058	0/0:14,0:14:39.10:0,39,581	0/0:29,0:29:87.30:0,87,1379	0/0:17,0:17:51.17:0,51,815	0/0:40,0:40:99:0,117,1815	1/1:0,24:24:69.14:936,69,0	0/0:27,0:27:81.24:0,81,1265	0/0:38,0:38:99:0,114,1807	0/0:26,0:26:78.27:0,78,1247	0/0:30,0:30:90.30:0,90,1408	0/0:33,0:33:99:0,99,1582	0/0:28,0:28:84.27:0,84,1319	0/0:31,0:31:93.32:0,93,1485	0/0:25,0:25:75.26:0,75,1199	1/1:2,30:32:20.51:1105,21,0	1/1:0,22:22:60.20:839,60,0	0/0:22,0:22:66.23:0,66,1055	0/0:23,0:23:69.22:0,69,1078	0/0:51,0:51:99:0,154,2415	0/0:33,0:33:99:0,99,1559	0/0:28,0:28:84.26:0,84,1309	0/0:40,0:40:99:0,120,1914	0/0:30,0:30:87.27:0,87,1346	0/0:29,0:29:84.28:0,84,1323	0/0:26,0:26:78.27:0,78,1246	0/0:16,0:16:48.16:0,48,767
chr10	67901262	.	GCACACACACACATACACACACACACA	G	653.59	PASS	AB=0.945;AC=9;AF=0.161;AN=56;BaseQRankSum=4.936;DP=660;FS=3.346;HRun=0;HaplotypeScore=359.7466;InbreedingCoeff=-0.2019;MQ=71.81;MQ0=7;MQRankSum=-0.590;QD=3.08;ReadPosRankSum=-2.143;VQSLOD=1.4938;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:52:41.48:0,41,1659	0/0:9,0:9:6.02:0,6,497	0/0:25,0:20:20.02:0,20,190	0/1:36,0:23:11.79:12,0,174	0/0:30,0:30:37.59:0,38,1041	0/0:12,0:12:30.04:0,30,1745	0/0:33,0:33:49.80:0,50,1559	0/1:18,0:18:99:137,0,477	0/1:5,19:23:27.72:199,0,28	0/0:29,0:29:63.56:0,64,3525	0/0:17,0:17:26.89:0,27,637	0/0:22,0:22:48.38:0,48,2955	0/1:19,0:19:67.05:67,0,509	0/0:24,0:24:51.08:0,51,3296	0/0:22,0:22:45.04:0,45,2088	0/0:26,0:26:54.51:0,55,1880	0/1:21,0:21:99:114,0,1998	0/0:18,0:18:6.02:0,6,497	0/0:20,0:19:36.06:0,36,1427	0/0:9,0:9:14.80:0,15,414	0/0:56,0:56:99:0,105,6085	0/1:23,0:23:81.93:82,0,276	0/1:26,0:25:10.84:11,0,437	0/1:26,0:26:75.36:75,0,358	0/0:18,0:18:27.08:0,27,1924	0/1:18,0:19:95.70:96,0,1164	0/0:22,0:22:48.09:0,48,3165	0/0:3,0:3:9.03:0,9,110
chr10	67901271	.	CACAT	C	1417.92	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=6.388;DP=625;FS=4.030;HRun=0;HaplotypeScore=118.4782;InbreedingCoeff=0.6379;MQ=59.14;MQ0=10;MQRankSum=-2.274;QD=8.44;ReadPosRankSum=-2.345;VQSLOD=2.5431;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:44:6.23:0,6,356	1/1:0,10:10:5.52:112,6,0	0/0:17,0:12:20.02:0,20,190	0/1:27,0:14:11.79:12,0,174	0/0:29,0:29:37.30:0,37,376	0/0:16,0:16:6.09:0,6,247	0/0:31,0:30:31.48:0,31,371	1/1:15,0:15:41.72:318,42,0	1/1:21,0:20:5.95:50,6,0	0/0:24,0:23:59.07:0,59,708	0/0:13,0:13:4.92:0,5,207	0/0:23,0:24:36.13:0,36,512	0/1:17,0:17:1.80:2,0,183	0/0:22,0:22:35.06:0,35,516	0/0:27,0:27:44.89:0,45,385	0/0:30,0:30:59.80:0,60,507	1/1:22,0:22:56.56:506,57,0	1/1:0,17:17:6.02:113,6,0	0/1:16,0:15:3.12:3,0,248	0/0:7,0:7:14.80:0,15,134	0/0:62,0:62:3.95:0,4,825	0/0:19,0:19:2.87:0,3,167	0/0:27,0:26:33.44:0,33,320	0/0:23,0:22:10.18:0,10,207	0/0:18,0:18:15.86:0,16,255	1/1:17,0:17:47.68:371,48,0	0/0:23,0:23:48.75:0,49,663	1/1:6,0:5:14.90:111,15,0
chr10	67901273	.	CAT	C	1338.96	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=5.567;DP=616;FS=12.506;HRun=0;HaplotypeScore=99.8811;InbreedingCoeff=0.5424;MQ=56.30;MQ0=11;MQRankSum=-1.005;QD=5.75;ReadPosRankSum=-3.168;VQSLOD=1.0745;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:44:18.36:0,18,370	1/1:10,0:10:5.41:50,5,0	0/0:16,0:11:20.02:0,20,190	0/1:25,0:12:11.79:12,0,174	0/0:28,0:28:37.30:0,37,376	0/0:15,0:15:2.94:0,3,169	0/0:29,0:28:31.46:0,31,370	1/1:5,11:15:41.74:319,42,0	1/1:21,0:20:5.88:36,6,0	0/0:23,0:22:59.03:0,59,588	0/0:12,0:12:4.92:0,5,206	0/0:24,0:24:28.12:0,28,387	0/0:16,0:16:9.61:0,10,197	0/0:20,0:20:31.48:0,31,408	0/0:27,0:27:44.89:0,45,367	0/0:30,0:30:60.35:0,60,478	1/1:22,0:22:56.74:443,57,0	0/1:18,0:18:2.15:42,0,2	0/1:17,0:16:7.71:8,0,258	0/0:8,0:8:17.76:0,18,134	0/1:62,0:61:99:119,0,679	0/0:18,0:18:24.31:0,24,195	0/0:27,0:26:43.22:0,43,334	0/0:23,0:22:30.82:0,31,235	0/1:18,0:18:8.30:8,0,179	1/1:18,0:18:50.57:375,51,0	0/0:22,0:22:37.86:0,38,471	1/1:6,0:5:14.90:111,15,0
chr10	67901275	.	T	TAC	882.18	PASS	AB=0.973;AC=15;AF=0.313;AN=48;BaseQRankSum=-5.028;DP=626;FS=2.103;HRun=0;HaplotypeScore=107.5822;InbreedingCoeff=0.1518;MQ=55.70;MQ0=12;MQRankSum=2.006;QD=3.13;ReadPosRankSum=-0.240;VQSLOD=2.5624;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:45:2.63:0,3,14	0/0:10,0:10:5.49:0,5,25	./.	./.	./.	0/1:16,0:16:14.61:103,0,15	0/0:25,5:30:3.64:0,4,31	./.	0/0:21,0:20:2.84:0,3,14	0/1:22,0:21:20.22:88,0,20	0/0:13,0:13:2.99:0,3,32	0/1:25,0:25:0.83:121,0,1	0/1:13,0:17:4.79:5,0,9	1/1:21,0:21:17.67:181,18,0	1/1:17,10:27:3.01:44,3,0	0/1:23,7:30:59.22:59,0,72	0/0:22,0:22:4.51:0,5,16	0/0:18,0:18:8.43:0,8,42	0/1:18,0:18:7.37:22,0,7	0/0:8,0:8:6:0,6,56	1/1:64,1:64:27.90:305,28,0	0/0:10,0:18:5.59:0,6,26	0/0:19,0:25:2.84:0,3,14	0/0:20,0:22:5.68:0,6,28	1/1:18,0:18:7.20:57,7,0	0/0:20,0:20:4.45:0,4,21	0/1:22,0:22:5.27:40,0,5	0/0:6,0:5:3.06:0,3,8
chr10	67902849	.	C	CGAGAGAGA	6973.19	PASS	AB=1.000;AC=47;AF=0.870;AN=54;BaseQRankSum=-1.819;DP=648;FS=0.000;HRun=0;HaplotypeScore=217.2970;InbreedingCoeff=0.3737;MQ=70.95;MQ0=4;MQRankSum=1.141;QD=12.54;ReadPosRankSum=3.084;VQSLOD=3.7418;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:43,0:42:9.48:175,9,0	1/1:11,0:11:15.94:320,16,0	0/1:40,0:28:0:0,0,0	0/0:49,0:26:2.91:0,3,33	1/1:21,0:21:2.31:60,2,0	1/1:21,0:21:5.28:113,5,0	1/1:25,0:25:6.49:171,6,0	1/1:30,0:30:30.07:701,30,0	1/1:13,0:13:11.99:187,12,0	1/1:21,0:21:30.08:798,30,0	0/0:6,0:6:0.94:0,1,1	1/1:38,0:38:17.90:541,18,0	1/1:24,0:22:17.91:522,18,0	1/1:24,0:24:10.67:285,11,0	0/0:22,0:22:0.47:0,0,2	1/1:17,0:17:3.01:100,3,0	1/1:10,2:19:20.74:622,21,0	1/1:7,6:17:11.25:306,11,0	1/1:20,0:19:26.30:249,26,0	1/1:13,0:13:5.69:173,6,0	1/1:23,0:23:3.64:133,4,0	1/1:22,0:20:2.20:57,2,0	1/1:19,0:19:8.60:151,9,0	1/1:31,0:29:7.99:186,8,0	./.	1/1:29,0:31:15.05:544,15,0	1/1:23,0:22:18.06:420,18,0	1/1:9,0:9:11.79:157,12,0
chr10	67902882	.	G	GAT	3705.38	PASS	AB=1.000;AC=28;AF=0.500;AN=56;BaseQRankSum=2.809;DP=828;FS=20.452;HRun=0;HaplotypeScore=211.4423;InbreedingCoeff=0.8173;MQ=62.97;MQ0=14;MQRankSum=-1.041;QD=10.21;ReadPosRankSum=-0.530;VQSLOD=1.6327;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:52:62.94:0,63,698	0/1:13,0:13:10.26:10,0,93	0/0:62,0:22:42.55:0,43,421	0/0:104,0:45:67.88:0,68,658	0/0:19,0:19:14.44:0,14,203	1/1:28,0:28:53.75:442,54,0	1/1:10,20:30:2.98:56,3,0	0/0:38,0:38:66.59:0,67,662	0/0:15,0:15:10.70:0,11,170	1/1:21,8:31:71.63:561,72,0	1/1:18,0:18:38.89:315,39,0	1/1:34,0:34:36.34:269,36,0	0/0:29,0:27:7.32:0,7,282	1/1:28,0:28:35.27:292,35,0	1/1:25,0:25:26.29:223,26,0	1/1:8,18:26:11.14:111,11,0	0/1:22,0:21:3.27:3,0,156	0/0:19,0:19:22.11:0,22,210	1/1:23,0:23:47.12:343,47,0	1/1:23,0:23:49.43:394,49,0	1/1:26,0:26:27.52:242,28,0	0/0:26,0:24:13.39:0,13,246	0/0:21,0:21:27.13:0,27,269	0/0:31,0:29:13.48:0,13,107	1/1:18,0:17:29.97:253,30,0	0/0:25,0:25:18.61:0,19,396	1/1:17,0:16:16.69:192,17,0	0/0:22,0:22:7.43:0,7,310
chr10	67904177	.	A	AGGAAGGAA	4092.59	PASS	AB=1.000;AC=42;AF=0.808;AN=52;BaseQRankSum=-1.051;DP=628;FS=2.565;HRun=0;HaplotypeScore=173.9134;InbreedingCoeff=0.3922;MQ=52.47;MQ0=24;MQRankSum=-3.878;QD=7.19;ReadPosRankSum=-1.895;VQSLOD=2.6311;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:21.05:0,21,393	1/1:18,0:16:19.97:125,20,0	./.	./.	0/0:23,0:23:36.20:0,36,612	1/1:26,0:26:4.83:127,5,0	1/1:33,0:30:42.08:543,42,0	1/1:44,0:41:25.89:144,26,0	1/1:17,0:17:20.91:187,21,0	1/1:16,6:21:23.91:297,24,0	1/1:17,0:17:12.03:186,12,0	1/1:21,0:21:6.55:121,7,0	0/1:30,0:28:35.61:82,0,36	1/1:21,0:18:4.97:177,5,0	1/1:23,0:22:23.79:266,24,0	1/1:24,0:24:2.68:122,3,0	1/1:36,0:34:25.64:190,26,0	0/1:39,0:38:0.22:139,0,0	1/1:23,0:18:13.26:103,13,0	1/1:30,0:28:40.69:282,41,0	0/1:28,0:27:11.89:64,0,12	1/1:18,0:18:14.84:106,15,0	1/1:24,0:22:21.29:165,21,0	1/1:23,0:23:14.49:121,14,0	1/1:14,0:13:18:288,18,0	0/1:21,0:20:34.21:34,0,315	1/1:17,0:17:24.03:223,24,0	0/0:5,0:5:3.01:0,3,56
chr10	67905392	.	ATT	A	4364.13	PASS	AB=0.607;AC=43;AF=0.768;AN=56;BaseQRankSum=5.292;DP=496;FS=12.954;HRun=16;HaplotypeScore=87.2508;InbreedingCoeff=0.6282;MQ=70.94;MQ0=2;MQRankSum=-0.638;QD=11.22;ReadPosRankSum=5.677;VQSLOD=2.3941;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,2:32:59.81:283,60,0	0/0:4,0:9:15.45:0,15,78	0/0:15,0:8:6.02:0,6,70	0/0:17,0:14:13.41:0,13,100	1/1:7,0:21:22.66:102,23,0	1/1:4,9:15:26.48:212,26,0	1/1:2,8:11:19.70:154,20,0	0/0:16,1:34:40.40:0,40,329	0/1:4,10:18:20.61:151,0,21	1/1:5,11:17:35.60:287,36,0	1/1:4,10:15:16.15:128,16,0	0/1:6,7:14:7.78:93,0,8	1/1:3,1:18:33.88:150,34,0	1/1:4,2:6:2.79:25,3,0	1/1:0,10:13:34.22:253,34,0	1/1:3,16:20:46.73:380,47,0	0/0:11,0:30:62.69:0,63,333	0/1:9,3:23:30.58:31,0,161	1/1:9,16:25:47.71:393,48,0	1/1:10,9:19:19.67:173,20,0	1/1:2,8:11:20.85:175,21,0	1/1:2,6:10:17.60:137,18,0	1/1:5,6:12:11.55:87,12,0	1/1:5,17:23:50.63:413,51,0	1/1:8,6:14:15.61:128,16,0	1/1:10,12:25:31.88:274,32,0	1/1:7,13:21:34.57:273,35,0	1/1:2,2:5:8.68:62,9,0
chr10	67907083	.	CGCTTTCTAGA	C	6399.18	PASS	AB=0.524;AC=11;AF=0.196;AN=56;BaseQRankSum=12.505;DP=654;FS=9.205;HRun=0;HaplotypeScore=200.2413;InbreedingCoeff=0.9535;MQ=82.07;MQ0=0;MQRankSum=-13.255;QD=49.22;ReadPosRankSum=1.211;VQSLOD=3.4663;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,34:41:69.24:2232,69,0	0/0:12,0:12:36.12:0,36,1863	0/0:26,0:26:78.22:0,78,3520	0/0:15,0:15:42.13:0,42,1921	0/1:1,10:11:0:0,0,0	0/0:25,0:25:72.25:0,72,3829	0/0:31,0:31:93.32:0,93,4838	0/0:27,0:27:78.26:0,78,3874	0/0:23,0:23:66.23:0,66,3453	0/0:13,0:13:39.13:0,39,1972	0/0:16,0:16:48.16:0,48,2422	0/0:28,0:28:84.27:0,84,4364	1/1:3,32:35:77.82:2529,78,0	0/0:28,0:28:84.29:0,84,4247	0/0:35,0:35:99:0,105,5614	0/0:34,0:34:99:0,102,5171	0/0:24,0:24:72.25:0,72,3877	0/0:24,0:24:69.24:0,69,3620	0/0:20,0:20:54.15:0,54,2257	0/0:19,0:19:57.20:0,57,2926	0/0:57,0:57:99:0,172,8832	1/1:3,12:15:24.08:718,24,0	1/1:2,14:16:14.73:413,15,0	1/1:2,10:12:14.85:508,15,0	0/0:10,0:10:27.09:0,27,1457	0/0:23,0:23:66.22:0,66,3063	0/0:25,0:25:69.24:0,69,3593	0/0:9,0:9:27.09:0,27,921
chr10	67912984	.	TAAC	T	654.64	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.711;DP=831;FS=8.957;HRun=0;HaplotypeScore=114.1046;InbreedingCoeff=0.9843;MQ=82.44;MQ0=0;MQRankSum=-2.382;QD=32.73;ReadPosRankSum=3.148;VQSLOD=3.9008;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,141,3139	0/0:14,0:14:42.14:0,42,946	0/0:27,0:26:78.27:0,78,1721	0/0:22,0:22:38.13:0,38,1006	0/0:32,0:32:96.33:0,96,2153	0/0:19,0:19:54.17:0,54,1141	0/0:43,0:43:99:0,120,2657	0/0:34,0:34:99:0,102,2271	1/1:1,19:20:45.15:750,45,0	0/0:27,0:27:72.24:0,72,1568	0/0:14,0:14:42.13:0,42,908	0/0:36,0:36:99:0,108,2440	0/0:21,0:21:57.20:0,57,1285	0/0:31,0:31:90.31:0,90,2038	0/0:28,0:28:75.26:0,75,1680	0/0:28,0:28:84.26:0,84,1770	0/0:49,0:49:99:0,138,3128	0/0:35,0:35:99:0,105,2374	0/0:23,0:23:63.21:0,63,1316	0/0:20,0:20:60.16:0,60,1219	0/0:70,0:70:99:0,202,4485	0/0:26,0:26:72.25:0,72,1598	0/0:15,0:15:45.15:0,45,985	0/0:54,0:54:99:0,157,3499	0/0:34,0:34:96.32:0,96,2131	0/0:28,0:28:78.26:0,78,1726	0/0:25,0:24:69.22:0,69,1519	0/0:5,0:5:15.05:0,15,340
chr10	67914818	.	A	ACCTC	12366.24	PASS	AB=0.600;AC=17;AF=0.304;AN=56;BaseQRankSum=-4.196;DP=749;FS=15.121;HRun=0;HaplotypeScore=156.8469;InbreedingCoeff=0.9012;MQ=81.20;MQ0=0;MQRankSum=-8.575;QD=50.47;ReadPosRankSum=1.840;VQSLOD=5.3083;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,43:58:99:2699,105,0	1/1:5,0:14:36.08:651,36,0	0/0:23,0:23:50.20:0,50,943	0/0:22,0:22:50.93:0,51,926	1/1:3,21:26:8.19:741,8,0	0/0:17,0:17:51.17:0,51,968	0/0:29,0:29:84.27:0,84,1555	1/1:9,0:30:87.14:1562,87,0	1/1:1,24:27:66.23:1770,66,0	0/0:37,0:36:99:0,102,1933	0/0:10,0:10:30.10:0,30,556	0/0:32,0:32:96.33:0,96,1799	0/0:20,0:20:60.19:0,60,1106	0/0:34,0:34:96.33:0,96,1822	0/0:37,0:37:99:0,111,2064	0/0:30,0:30:84.27:0,84,1560	1/1:1,0:35:90.31:1764,90,0	1/1:1,0:22:57.20:1112,57,0	0/0:25,0:25:72.24:0,72,1337	0/0:19,0:19:51.16:0,51,933	0/0:56,0:56:99:0,163,3036	0/0:22,0:22:66.20:0,66,1180	0/0:14,0:14:36.12:0,36,683	0/0:25,0:25:75.24:0,75,1391	0/0:19,0:19:57.20:0,57,1070	0/1:9,17:27:92.67:1663,0,93	0/0:33,0:33:93.30:0,93,1732	1/1:1,4:6:15.05:404,15,0
chr10	67916597	.	C	CTG	23568.67	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-18.186;DP=782;FS=2.283;HRun=0;HaplotypeScore=80.2481;InbreedingCoeff=0.9995;MQ=86.99;MQ0=1;MQRankSum=-3.862;QD=48.80;ReadPosRankSum=3.884;VQSLOD=6.0838;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,141,2052	0/0:15,0:15:39.13:0,39,573	0/0:28,0:28:69.20:0,69,960	0/0:28,0:28:78.26:0,78,1111	0/0:29,0:29:81.23:0,81,1133	1/1:2,15:17:45.15:843,45,0	1/1:2,32:35:81.28:1507,81,0	0/0:28,0:28:84.28:0,84,1236	0/0:30,0:30:90.26:0,90,1265	1/1:1,27:28:81.23:1439,81,0	1/1:0,27:27:78.27:1461,78,0	1/1:1,29:30:84.29:1574,84,0	1/1:0,24:25:69.10:1292,69,0	1/1:1,31:33:90.31:1685,90,0	1/1:2,32:34:93.32:1742,93,0	1/1:2,27:30:66.23:1236,66,0	0/0:25,1:26:22.21:0,22,1046	0/0:28,0:28:78.26:0,78,1149	1/1:1,19:21:63.18:1094,63,0	1/1:1,26:28:69.24:1277,69,0	1/1:0,28:28:63.22:1180,63,0	1/1:2,33:34:84.29:1573,84,0	1/1:0,22:22:66.23:1236,66,0	1/1:1,38:39:99:1911,102,0	1/1:2,22:25:57.20:1060,57,0	0/0:28,0:27:81.27:0,81,1193	1/1:0,26:26:78.27:1460,78,0	0/0:10,0:10:30.10:0,30,442
chr10	67926721	.	G	GA	8324.99	PASS	AB=1.000;AC=27;AF=0.482;AN=56;BaseQRankSum=-11.916;DP=656;FS=2.538;HRun=9;HaplotypeScore=62.8644;InbreedingCoeff=0.8974;MQ=75.56;MQ0=0;MQRankSum=-1.697;QD=25.77;ReadPosRankSum=2.252;VQSLOD=5.6707;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:65.94:0,66,567	0/0:11,0:11:29.98:0,30,260	0/0:17,0:17:36.75:0,37,298	0/1:14,0:14:18.03:18,0,106	0/0:40,0:41:99:0,116,991	1/1:4,21:25:54.15:597,54,0	1/1:4,9:15:23.88:232,24,0	0/0:29,0:29:62.94:0,63,547	0/0:20,0:20:56.98:0,57,495	1/1:1,30:32:93.03:988,93,0	1/1:3,27:30:75.12:800,75,0	1/1:1,14:15:45.04:482,45,0	0/0:25,1:26:35.79:0,36,540	1/1:6,17:23:30.99:543,31,0	1/1:1,26:27:63.17:697,63,0	1/1:1,18:19:48.13:531,48,0	0/0:28,0:28:74.96:0,75,646	0/0:22,0:22:62.99:0,63,546	1/1:1,11:13:35.93:378,36,0	1/1:1,35:36:97.70:1027,98,0	1/1:3,11:14:1.02:239,1,0	0/0:18,0:18:47.99:0,48,417	0/0:29,0:29:86.98:0,87,755	0/0:14,0:14:41.99:0,42,365	1/1:2,26:29:55.05:816,55,0	0/0:34,0:34:89.96:0,90,780	1/1:0,30:31:90.08:977,90,0	0/0:19,0:19:56.99:0,57,495
chr10	68267882	.	AG	A	896.84	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.453;DP=693;FS=2.686;HRun=9;HaplotypeScore=74.7590;InbreedingCoeff=0.8789;MQ=70.75;MQ0=0;MQRankSum=-2.724;QD=21.35;ReadPosRankSum=0.391;VQSLOD=4.4599;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,108,1226	0/0:18,0:18:48.08:0,48,526	0/0:29,0:29:34.33:0,34,614	0/0:16,0:15:2.03:0,2,205	0/0:31,0:31:66.16:0,66,733	0/0:24,0:24:69.20:0,69,794	0/0:29,0:29:75.17:0,75,840	0/0:24,0:24:57.11:0,57,618	0/0:10,0:23:25.52:0,26,128	1/1:1,21:22:63.03:577,63,0	1/1:2,17:20:50.05:442,50,0	0/0:30,0:30:78.18:0,78,872	0/0:25,1:26:41.72:0,42,725	0/0:19,0:19:45.09:0,45,501	0/0:28,1:29:53.73:0,54,849	0/0:26,1:28:44.56:0,45,737	0/0:25,2:27:35.72:0,36,665	0/0:16,0:16:42.12:0,42,481	0/0:22,0:22:51.15:0,51,588	0/0:22,0:22:60.15:0,60,678	0/0:39,0:39:99:0,108,1236	0/0:35,0:35:87.21:0,87,983	0/0:15,0:15:39.11:0,39,445	0/0:24,1:25:35.70:0,36,654	0/0:19,1:20:29.70:0,30,595	0/0:23,0:23:51.11:0,51,573	0/0:35,0:35:87.13:0,87,950	0/0:6,0:6:9.03:0,9,104
chr10	68268514	.	T	TA	7235.46	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-14.033;DP=523;FS=0.765;HRun=9;HaplotypeScore=50.8446;InbreedingCoeff=0.9536;MQ=80.87;MQ0=0;MQRankSum=-1.988;QD=23.42;ReadPosRankSum=1.990;VQSLOD=5.6238;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:53.85:0,54,448	1/1:0,4:4:9.02:100,9,0	0/0:17,0:16:14.18:0,14,200	0/0:20,0:19:18.56:0,19,248	0/0:29,0:29:80.96:0,81,700	1/1:4,12:16:10.04:339,10,0	1/1:0,9:9:24.06:266,24,0	1/1:7,16:23:25.01:468,25,0	0/0:17,0:17:41.97:0,42,360	0/0:25,0:25:59.98:0,60,521	0/0:23,0:23:56.97:0,57,491	1/1:2,19:21:45.12:498,45,0	0/0:19,0:19:38.98:0,39,339	1/1:3,6:9:15.04:166,15,0	1/1:2,17:18:39.11:431,39,0	1/1:2,21:23:42.11:465,42,0	1/1:2,27:29:69.19:763,69,0	1/1:4,5:9:9.02:100,9,0	1/1:5,12:17:36.08:388,36,0	1/1:4,18:22:54.05:567,54,0	1/1:2,19:20:57.15:631,57,0	1/1:1,14:15:35.93:366,36,0	0/0:26,0:26:65.95:0,66,567	0/0:17,0:17:44.97:0,45,386	1/1:3,12:15:30.08:332,30,0	1/1:5,18:23:54.15:597,54,0	1/1:4,23:27:63.17:695,63,0	1/1:1,6:7:6.02:66,6,0
chr10	68269244	.	GA	G	499.35	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.567;DP=699;FS=0.000;HRun=3;HaplotypeScore=65.0622;InbreedingCoeff=0.9957;MQ=87.42;MQ0=0;MQRankSum=-1.840;QD=23.78;ReadPosRankSum=2.905;VQSLOD=3.1334;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:78.24:0,78,1085	0/0:12,0:12:36.09:0,36,496	0/0:24,0:24:63.14:0,63,803	0/0:24,0:24:69.06:0,69,862	0/0:47,0:47:99:0,135,1887	0/0:22,0:22:57.19:0,57,820	0/0:29,0:29:87.23:0,87,1193	0/0:39,0:39:99:0,117,1575	1/1:1,20:21:48.15:594,48,0	0/0:35,0:35:99:0,99,1330	0/0:34,0:34:99:0,102,1432	0/0:26,0:26:75.18:0,75,1020	0/0:26,0:26:78.24:0,78,1086	0/0:21,0:21:60.12:0,60,754	0/0:24,0:24:66.19:0,66,913	0/0:22,0:22:66.20:0,66,914	0/0:25,0:25:75.23:0,75,1059	0/0:13,0:13:39.13:0,39,561	0/0:18,0:18:48.09:0,48,617	0/0:30,0:30:87.27:0,87,1216	0/0:21,0:21:63.13:0,63,844	0/0:24,0:24:69.16:0,69,874	0/0:21,0:21:60.17:0,60,823	0/0:15,0:15:42.08:0,42,530	0/0:27,0:27:78.21:0,78,1050	0/0:28,0:28:84.26:0,84,1159	0/0:38,0:38:99:0,111,1524	0/0:7,0:7:21.06:0,21,281
chr10	68270752	.	TCCTGCCTCTGCCTGCCCCTG	T	1180.51	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.518;DP=589;FS=31.643;HRun=0;HaplotypeScore=293.6021;InbreedingCoeff=0.9743;MQ=79.53;MQ0=0;MQRankSum=-5.608;QD=62.13;ReadPosRankSum=1.513;VQSLOD=1.6658;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:78.27:0,78,5990	0/0:9,0:9:21.07:0,21,1837	0/0:16,0:15:32.75:0,33,1828	0/0:35,0:33:51:0,51,2767	0/0:26,0:26:51.16:0,51,3751	0/0:15,0:15:36.12:0,36,2576	0/0:24,0:24:69.22:0,69,5222	0/0:21,0:21:42.14:0,42,2472	1/1:2,17:19:33:1275,33,0	0/0:24,0:24:58.44:0,58,3686	0/0:14,0:14:15.05:0,15,1348	0/0:29,0:29:75.26:0,75,5995	0/0:27,0:27:60.21:0,60,4225	0/0:20,0:20:48.16:0,48,3901	0/0:27,0:27:75.24:0,75,5346	0/0:29,0:29:75.25:0,75,5748	0/0:24,0:24:60.21:0,60,4614	0/0:23,0:23:69.24:0,69,5744	0/0:15,0:15:30.09:0,30,1565	0/0:16,0:16:36.08:0,36,2054	0/0:25,0:25:60.68:0,61,4438	0/0:10,0:10:29.59:0,30,1955	0/0:12,0:12:21.07:0,21,1572	0/0:33,0:33:81.22:0,81,5836	0/0:22,0:22:57.16:0,57,3459	0/0:13,0:13:36.12:0,36,2410	0/0:18,0:18:42.13:0,42,2993	0/0:12,0:12:30.10:0,30,1728
chr10	68271479	.	CAAAAAAAAA	C	921.11	PASS	AC=2;AF=0.037;AN=54;BaseQRankSum=4.508;DP=429;FS=6.354;HRun=19;HaplotypeScore=95.9901;InbreedingCoeff=0.5861;MQ=39.29;MQ0=46;MQRankSum=-2.378;QD=26.32;ReadPosRankSum=1.373;VQSLOD=-0.6464;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:35:56.41:0,56,1946	0/0:4,0:5:9.03:0,9,297	./.	0/0:9,0:1:3:0,3,29	0/0:11,0:10:27.56:0,28,668	0/0:10,0:14:27.09:0,27,1051	0/0:17,0:12:18.06:0,18,624	1/1:10,25:25:53.56:1015,54,0	0/0:9,0:9:18.06:0,18,357	0/0:8,0:9:17.47:0,17,169	0/0:5,0:5:12.03:0,12,157	0/0:12,0:10:21.07:0,21,797	0/0:18,0:18:27.05:0,27,887	0/0:12,0:11:18.06:0,18,728	0/0:15,0:14:26.62:0,27,1063	0/0:13,0:12:24.04:0,24,871	0/0:28,0:25:45.15:0,45,1766	0/0:12,0:9:12.51:0,13,453	0/0:28,0:24:60.68:0,61,1842	0/0:4,0:4:12.04:0,12,352	0/0:11,0:6:3.01:0,3,59	0/0:3,0:2:6.02:0,6,161	0/0:7,0:7:21.07:0,21,757	0/0:20,0:16:24.97:0,25,938	0/0:12,0:16:39.13:0,39,1228	0/0:18,0:17:45.13:0,45,1434	0/0:20,0:22:43.72:0,44,1636	0/0:7,0:6:15.05:0,15,610
chr10	68271775	.	AAT	A	125.01	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.906;DP=306;FS=1.353;HRun=0;HaplotypeScore=36.6415;InbreedingCoeff=0.4562;MQ=56.69;MQ0=2;MQRankSum=-1.292;QD=13.89;ReadPosRankSum=1.180;VQSLOD=2.9734;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:75.64:0,76,1133	0/0:1,0:1:3.01:0,3,52	0/0:8,0:3:6:0,6,75	0/0:5,0:1:2.96:0,3,19	0/0:15,0:15:42.01:0,42,584	0/0:12,0:12:33.10:0,33,543	0/0:9,0:9:24.05:0,24,362	0/0:25,0:25:75.16:0,75,1044	1/1:1,8:9:15.05:213,15,0	0/0:9,0:9:3.46:0,3,188	0/0:7,0:7:16.24:0,16,134	0/0:6,0:6:18.05:0,18,273	0/0:5,0:5:15.03:0,15,205	0/0:2,0:2:6.01:0,6,78	0/0:9,0:9:27.08:0,27,440	0/0:7,0:7:21.05:0,21,310	0/0:48,0:48:99:0,135,1964	0/0:13,0:13:17.15:0,17,498	0/0:10,0:10:26.91:0,27,373	0/0:6,0:6:15.01:0,15,204	0/0:3,0:3:9.02:0,9,130	0/0:2,0:2:6.02:0,6,103	0/0:4,0:3:9.01:0,9,127	0/0:7,0:7:21.06:0,21,336	0/0:7,0:7:16.30:0,16,261	0/0:17,0:16:48.10:0,48,675	0/0:15,0:15:42.10:0,42,644	0/0:19,0:19:57.05:0,57,887
chr10	68271959	.	A	AT	487.86	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-0.714;DP=391;FS=2.354;HRun=1;HaplotypeScore=36.1584;InbreedingCoeff=0.8044;MQ=76.47;MQ0=0;MQRankSum=-2.569;QD=32.52;ReadPosRankSum=2.330;VQSLOD=3.2969;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:96.29:0,96,1229	0/0:7,0:7:21.05:0,21,256	0/0:6,0:6:18.03:0,18,196	0/0:11,0:11:32.44:0,32,340	0/0:12,0:12:35.68:0,36,422	0/0:15,0:15:45.12:0,45,544	0/0:10,0:10:30.08:0,30,375	0/0:32,0:32:93.17:0,93,1126	1/1:1,14:15:39.13:582,39,0	0/0:19,0:19:54.17:0,54,687	0/0:16,0:16:48.16:0,48,622	0/0:15,0:15:45.13:0,45,570	0/0:9,0:9:27.06:0,27,320	0/0:10,0:10:24.08:0,24,311	0/0:12,0:12:33.11:0,33,428	0/0:11,0:11:33.09:0,33,414	0/0:19,0:19:57.19:0,57,739	0/0:17,0:17:48.13:0,48,607	0/0:15,0:15:45.13:0,45,560	0/0:8,0:8:24.08:0,24,311	0/0:16,0:16:48.16:0,48,623	0/0:1,0:1:3.01:0,3,39	0/0:4,0:4:12.04:0,12,156	0/0:12,0:12:33.08:0,33,400	0/0:11,0:11:33.11:0,33,428	0/0:26,0:26:69.22:0,69,895	0/0:24,0:24:66.21:0,66,855	0/0:5,0:5:15.01:0,15,176
chr10	68274676	.	TCCAA	T	9191.66	PASS	AB=0.969;AC=33;AF=0.589;AN=56;BaseQRankSum=7.373;DP=643;FS=14.075;HRun=0;HaplotypeScore=114.9514;InbreedingCoeff=0.9073;MQ=68.99;MQ0=1;MQRankSum=-0.814;QD=24.13;ReadPosRankSum=4.759;VQSLOD=3.3058;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:63.22:0,63,1490	1/1:2,9:11:24.08:386,24,0	0/1:30,1:23:16.12:16,0,506	0/0:25,0:22:24.90:0,25,398	0/0:30,0:30:54.18:0,54,1278	1/1:6,15:21:18.06:290,18,0	1/1:6,8:14:18.06:290,18,0	0/0:29,0:29:36.11:0,36,626	0/0:32,0:32:72.25:0,72,1668	0/0:15,0:31:60.20:0,60,1064	0/0:8,0:18:30.09:0,30,461	1/1:7,18:25:42.14:676,42,0	0/0:29,0:29:75.24:0,75,1731	1/1:11,7:18:15.05:242,15,0	1/1:10,13:23:33.58:532,34,0	1/1:8,16:24:45.15:725,45,0	1/1:7,22:28:45.15:725,45,0	0/0:3,0:10:12.04:0,12,210	1/1:8,8:16:21.07:336,21,0	1/1:7,26:31:66.22:1051,66,0	1/1:9,11:20:27.09:435,27,0	1/1:5,21:26:57.19:904,57,0	0/0:14,0:14:33.10:0,33,708	0/0:20,0:20:45.15:0,45,1085	1/1:7,16:23:42.14:638,42,0	1/1:7,19:27:7.77:838,8,0	1/1:8,17:25:28.63:481,29,0	1/1:2,13:15:39.13:628,39,0
chr10	68275856	.	T	TGAGATAGTCG	12465.44	PASS	AB=0.970;AC=9;AF=0.161;AN=56;BaseQRankSum=-5.734;DP=704;FS=4.304;HRun=0;HaplotypeScore=219.9824;InbreedingCoeff=0.8674;MQ=80.85;MQ0=0;MQRankSum=-14.209;QD=87.78;ReadPosRankSum=-2.958;VQSLOD=4.2724;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,102,3352	0/0:14,0:14:39.12:0,39,1104	0/0:27,0:27:78.24:0,78,2295	0/0:13,0:13:36.12:0,36,1107	0/0:33,0:33:99:0,99,3148	0/0:24,0:24:72.22:0,72,2143	0/0:29,0:29:81.26:0,81,2626	1/1:25,3:30:84.27:3281,84,0	1/1:6,15:23:63.21:3038,63,0	1/1:13,19:34:93.31:4201,93,0	1/1:9,11:23:39.13:1880,39,0	0/0:44,0:44:99:0,132,4263	0/0:26,0:26:75.26:0,75,2473	0/0:31,0:31:93.29:0,93,2936	0/0:38,0:38:99:0,108,3480	0/1:31,1:32:66.11:66,0,2754	0/0:22,0:22:66.21:0,66,2047	0/0:11,0:11:33.11:0,33,1084	0/0:22,0:22:66.20:0,66,1987	0/0:10,0:10:30.10:0,30,948	0/0:33,0:33:90.31:0,90,3001	0/0:17,0:17:51.16:0,51,1605	0/0:26,0:26:78.25:0,78,2466	0/0:22,0:22:63.22:0,63,2070	0/0:18,0:18:51.17:0,51,1682	0/0:22,0:22:63.22:0,63,2090	0/0:31,0:31:87.30:0,87,2796	0/0:13,0:13:39.13:0,39,1299
chr10	68276606	.	A	AT	1545.05	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=-8.782;DP=651;FS=1.861;HRun=7;HaplotypeScore=65.8822;InbreedingCoeff=0.8694;MQ=76.60;MQ0=0;MQRankSum=1.997;QD=22.07;ReadPosRankSum=0.054;VQSLOD=3.2305;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,114,1097	0/0:9,0:9:21.02:0,21,197	0/0:20,0:19:38.32:0,38,325	0/1:14,0:14:0.59:1,0,89	0/0:32,0:32:81.10:0,81,775	0/0:29,0:29:81.13:0,81,782	0/0:20,0:20:48.07:0,48,463	0/0:42,0:42:99:0,108,1040	0/0:24,0:24:66.08:0,66,630	1/1:4,25:29:75.23:905,75,0	1/1:4,23:27:63.19:761,63,0	0/0:28,0:28:78.10:0,78,741	0/0:24,0:24:63.08:0,63,602	0/0:11,0:11:27.02:0,27,255	0/0:22,0:22:57.07:0,57,544	0/0:23,0:23:63.10:0,63,608	0/0:24,0:24:66.09:0,66,631	0/0:12,0:13:32.03:0,32,294	0/0:16,0:16:39.05:0,39,372	0/0:33,0:33:96.15:0,96,927	0/0:16,0:16:45.06:0,45,430	0/0:16,0:16:45.06:0,45,433	0/0:18,0:18:51.07:0,51,487	0/0:11,0:11:30.05:0,30,290	0/0:25,0:25:75.12:0,75,724	0/0:27,0:27:66.08:0,66,633	0/0:34,0:34:96.14:0,96,922	0/0:26,0:26:77.16:0,77,730
chr10	68277182	.	G	GT	5872.69	PASS	AB=0.846;AC=33;AF=0.589;AN=56;BaseQRankSum=-10.836;DP=536;FS=0.372;HRun=12;HaplotypeScore=58.7674;InbreedingCoeff=0.8277;MQ=68.19;MQ0=0;MQRankSum=-0.463;QD=17.27;ReadPosRankSum=-0.567;VQSLOD=5.6672;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,1:26:30.42:0,30,387	1/1:1,6:7:18.03:175,18,0	0/1:13,0:10:0.31:0,0,38	0/1:17,0:9:17.39:17,0,52	0/0:30,0:32:89.63:0,90,629	1/1:6,20:28:38.67:518,39,0	1/1:3,7:10:21.03:204,21,0	0/0:7,0:20:24.38:0,24,71	0/0:13,0:13:35.77:0,36,261	0/0:16,0:17:34.83:0,35,247	0/0:21,0:22:46.74:0,47,334	1/1:1,18:19:48.08:467,48,0	0/0:10,0:10:26.83:0,27,195	0/1:3,7:10:0.88:154,0,1	1/1:8,21:29:63.10:613,63,0	1/1:5,14:20:23:372,23,0	1/1:3,25:30:59.77:554,60,0	0/0:20,0:20:44.48:0,44,320	1/1:7,15:22:45.03:425,45,0	1/1:10,15:25:16.41:472,16,0	1/1:0,10:10:15.02:146,15,0	1/1:2,13:16:38.89:362,39,0	0/0:16,2:18:12.56:0,13,255	0/0:18,0:18:38.76:0,39,285	1/1:4,11:16:7.97:226,8,0	1/1:6,15:22:19.30:374,19,0	1/1:8,25:33:40.41:535,40,0	1/1:1,8:10:29.56:259,30,0
chr10	68277446	.	G	GA	966.33	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-6.021;DP=533;FS=3.258;HRun=8;HaplotypeScore=53.5056;InbreedingCoeff=0.9159;MQ=71.76;MQ0=1;MQRankSum=-0.633;QD=23.57;ReadPosRankSum=-0.334;VQSLOD=4.1446;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:66:0,66,597	0/0:7,0:7:21.01:0,21,192	0/0:12,0:13:16.95:0,17,170	0/0:8,0:6:6.89:0,7,57	0/0:27,0:27:69:0,69,622	0/0:21,0:21:54.03:0,54,494	0/0:11,0:11:27:0,27,243	0/0:34,0:34:84.04:0,84,769	0/0:20,0:20:47.99:0,48,432	1/1:2,22:24:63.19:727,63,0	1/1:4,13:17:9.41:354,9,0	0/0:18,0:18:54.03:0,54,494	0/0:20,0:20:57.03:0,57,521	0/0:14,0:14:39:0,39,351	0/0:24,0:25:59.04:0,59,528	0/0:31,0:31:84.02:0,84,764	0/0:18,0:18:48.02:0,48,439	0/0:22,0:22:63.02:0,63,574	0/0:17,0:17:48.02:0,48,439	0/0:17,0:17:48.02:0,48,439	0/0:16,0:16:48.03:0,48,439	0/0:11,0:11:27.01:0,27,247	0/0:29,0:29:84.01:0,84,758	0/0:14,0:14:33.01:0,33,302	0/0:23,0:23:66.04:0,66,603	0/0:22,0:22:57.03:0,57,522	0/0:22,0:22:60.02:0,60,544	0/0:6,0:6:18.01:0,18,164
chr10	68277744	.	CT	C	433.26	PASS	AB=0.909;AC=3;AF=0.054;AN=56;BaseQRankSum=3.752;DP=532;FS=0.803;HRun=7;HaplotypeScore=83.9380;InbreedingCoeff=0.6364;MQ=83.92;MQ0=3;MQRankSum=-3.492;QD=14.44;ReadPosRankSum=-3.475;VQSLOD=2.9188;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:66.21:0,66,829	0/0:3,0:3:9.03:0,9,113	0/0:61,0:36:27.78:0,28,637	0/0:52,0:30:20.68:0,21,341	0/0:20,0:20:57.16:0,57,694	0/0:19,0:19:51.16:0,51,641	0/0:6,0:6:18.06:0,18,226	1/1:7,13:20:54.02:527,54,0	0/0:15,0:15:27.09:0,27,339	0/0:29,0:29:75.24:0,75,941	0/0:20,0:20:54.17:0,54,679	0/0:12,0:12:36.11:0,36,451	0/1:9,1:10:3.48:3,0,275	0/0:7,0:7:18.94:0,19,227	0/0:16,0:16:39.12:0,39,490	0/0:12,0:12:26.62:0,27,301	0/0:27,0:27:69.21:0,69,852	0/0:12,0:12:33.05:0,33,383	0/0:16,0:16:42.13:0,42,517	0/0:20,0:20:51.11:0,51,611	0/0:2,0:2:6.01:0,6,63	0/0:10,0:10:27.09:0,27,340	0/0:20,0:20:60.17:0,60,729	0/0:10,0:10:30.10:0,30,377	0/0:14,0:14:39.12:0,39,490	0/0:29,0:29:69.17:0,69,837	0/0:31,0:31:81.80:0,82,952	0/0:16,0:16:48.15:0,48,602
chr10	68277770	.	CT	C	485.11	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.541;DP=506;FS=25.069;HRun=7;HaplotypeScore=90.7491;InbreedingCoeff=0.7272;MQ=76.52;MQ0=3;MQRankSum=-0.164;QD=20.21;ReadPosRankSum=-3.507;VQSLOD=1.4311;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:63.20:0,63,782	0/0:3,0:3:9.02:0,9,102	0/0:55,0:30:24.05:0,24,419	0/0:44,0:24:10.36:0,10,180	0/0:23,0:23:66.15:0,66,785	0/0:15,0:15:36.11:0,36,444	0/0:7,0:7:18.06:0,18,226	1/1:5,19:24:57.12:580,57,0	0/0:13,0:13:27.02:0,27,319	0/0:25,0:25:66.21:0,66,820	0/0:18,0:18:42.14:0,42,540	0/0:13,0:13:36.07:0,36,432	0/0:9,0:9:24.08:0,24,297	0/0:8,0:8:4.49:0,4,209	0/0:19,0:18:46.96:0,47,571	0/0:13,0:13:23.88:0,24,278	0/0:22,0:21:54.10:0,54,656	0/0:12,0:12:24.08:0,24,299	0/0:15,0:15:45.12:0,45,535	0/0:20,0:20:48.12:0,48,583	0/0:2,0:2:6.02:0,6,74	0/0:10,0:10:30.10:0,30,377	0/0:23,0:23:60.14:0,60,711	0/0:12,0:12:24.08:0,24,299	0/0:11,0:11:30.10:0,30,377	0/0:27,0:27:78.24:0,78,971	0/0:26,0:26:61.36:0,61,740	0/0:11,0:10:24.08:0,24,299
chr10	68277810	.	T	TTTC	185.38	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=3.208;DP=510;FS=19.849;HRun=0;HaplotypeScore=104.3986;InbreedingCoeff=0.2293;MQ=53.72;MQ0=45;MQRankSum=-0.885;QD=2.65;ReadPosRankSum=2.402;VQSLOD=0.2116;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:19:46.54:0,47,574	0/0:5,0:5:7.88:0,8,38	0/0:45,0:13:12.85:0,13,117	0/0:35,0:11:2.68:0,3,45	0/0:26,0:26:53.44:0,53,641	0/0:20,0:16:18.57:0,19,273	0/0:6,0:5:8.21:0,8,46	0/0:11,0:10:25.85:0,26,216	1/1:3,11:14:8.15:216,8,0	0/1:22,0:21:10.46:10,0,222	0/1:20,0:19:13.81:61,0,14	0/1:14,0:11:7.48:7,0,135	0/0:15,0:13:19.44:0,19,348	0/0:7,0:6:17.74:0,18,128	0/0:16,0:14:28.81:0,29,284	0/0:14,0:13:17.52:0,18,106	0/0:26,0:22:31.66:0,32,372	0/0:11,0:10:18.75:0,19,123	0/0:24,0:21:9.54:0,10,193	0/0:23,0:22:21.21:0,21,248	0/0:3,0:2:6.01:0,6,61	0/0:13,0:12:18.57:0,19,105	0/0:28,0:27:65.20:0,65,643	0/0:17,0:13:26.86:0,27,329	0/0:15,0:15:21.12:0,21,139	0/0:23,0:22:39.87:0,40,379	0/0:27,0:23:16.77:0,17,277	0/0:9,0:8:10.45:0,10,107
chr10	68278406	.	T	TAGTC	4639.93	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-9.453;DP=549;FS=9.252;HRun=0;HaplotypeScore=88.1362;InbreedingCoeff=0.9982;MQ=84.08;MQ0=1;MQRankSum=-3.505;QD=67.25;ReadPosRankSum=-0.492;VQSLOD=6.7507;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:69.21:0,69,1296	0/0:8,0:8:21.07:0,21,407	0/0:19,0:19:52.71:0,53,891	0/0:17,0:17:44.51:0,45,826	0/0:25,0:25:75.26:0,75,1452	0/0:23,0:23:63.22:0,63,1210	0/0:14,0:14:39.12:0,39,712	1/1:5,9:15:36.12:910,36,0	1/1:2,18:20:51.17:1392,51,0	1/1:1,18:18:54.19:1439,54,0	1/1:3,12:15:30.34:899,30,0	0/0:21,0:21:54.19:0,54,1046	0/0:16,0:16:42.14:0,42,813	0/0:16,0:16:45.15:0,45,872	0/0:27,0:27:77.86:0,78,1473	0/0:17,0:17:51.17:0,51,988	0/0:22,0:22:60.09:0,60,1084	0/0:13,0:13:36.12:0,36,697	0/0:24,0:24:72.25:0,72,1365	0/0:23,0:23:66.23:0,66,1278	0/0:16,0:16:48.15:0,48,892	0/0:19,0:19:54.19:0,54,1046	0/0:14,0:14:36.07:0,36,629	0/0:9,0:9:27.08:0,27,490	0/0:25,0:25:75.24:0,75,1417	0/0:37,0:37:99:0,108,2071	0/0:38,0:38:99:0,108,2092	0/0:11,0:11:30.10:0,30,581
chr10	68278502	.	CT	C	120.60	PASS	AC=2;AF=0.038;AN=52;BaseQRankSum=0.596;DP=469;FS=7.088;HRun=7;HaplotypeScore=58.2091;InbreedingCoeff=0.7227;MQ=36.63;MQ0=74;MQRankSum=-3.209;QD=9.28;ReadPosRankSum=2.275;VQSLOD=0.6700;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:22:21.04:0,21,249	0/0:6,0:5:2.04:0,2,6	./.	./.	0/0:24,0:21:27.04:0,27,312	0/0:14,0:12:27.07:0,27,326	0/0:17,0:14:35.82:0,36,381	0/0:15,0:13:29.67:0,30,325	1/1:6,7:11:21.04:212,21,0	0/0:14,0:12:18:0,18,193	0/0:21,0:17:21.54:0,22,264	0/0:15,0:13:24.08:0,24,302	0/0:11,0:9:24.02:0,24,262	0/0:10,0:8:10.85:0,11,118	0/0:19,0:17:18.05:0,18,215	0/0:12,0:11:13.23:0,13,123	0/0:35,0:26:36.57:0,37,441	0/0:23,0:14:30.51:0,31,347	0/0:18,0:16:33.11:0,33,413	0/0:26,0:23:49.40:0,49,595	0/0:9,0:5:1.25:0,1,3	0/0:13,0:13:30.06:0,30,360	0/0:19,0:18:21.07:0,21,260	0/0:26,0:17:15.87:0,16,152	0/0:19,0:18:16.77:0,17,192	0/0:17,0:16:29.93:0,30,304	0/0:27,0:25:61.09:0,61,737	0/0:8,0:6:15.02:0,15,172
chr10	68278644	.	C	CTGTG	47.25	PASS	AB=0.828;AC=4;AF=0.071;AN=56;BaseQRankSum=2.970;DP=476;FS=10.756;HRun=0;HaplotypeScore=102.0163;InbreedingCoeff=0.4209;MQ=70.53;MQ0=10;MQRankSum=-1.491;QD=1.07;ReadPosRankSum=-3.038;VQSLOD=0.4556;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:48.15:0,48,712	0/0:5,0:5:15.05:0,15,238	0/0:32,0:22:59.16:0,59,977	0/0:28,0:21:58.75:0,59,1019	0/0:18,0:17:33.06:0,33,490	0/0:17,0:17:26.96:0,27,427	0/0:23,0:23:51.17:0,51,782	0/0:14,0:14:36.08:0,36,580	0/0:17,0:17:42.14:0,42,716	1/1:10,0:10:6:52,6,0	0/1:10,11:21:7.64:61,0,8	0/0:16,0:16:33.10:0,33,509	0/0:11,0:11:33.11:0,33,565	0/0:13,0:13:27.08:0,27,409	0/0:19,0:19:42.14:0,42,683	0/0:17,0:17:48.16:0,48,759	0/0:30,0:29:58.06:0,58,863	0/1:13,0:12:39.66:40,0,362	0/0:9,0:9:22.31:0,22,344	0/0:13,0:12:23.65:0,24,330	0/0:26,0:25:51.15:0,51,761	0/0:10,0:9:14.84:0,15,244	0/0:14,0:14:33.11:0,33,518	0/0:31,0:31:72.04:0,72,1264	0/0:11,0:11:27.09:0,27,468	0/0:20,0:20:57.13:0,57,896	0/0:14,0:13:38.72:0,39,606	0/0:5,0:4:12.04:0,12,170
chr10	68278646	.	ATGTGTG	A	2046.65	PASS	AB=0.801;AC=32;AF=0.640;AN=50;BaseQRankSum=4.202;DP=491;FS=17.395;HRun=0;HaplotypeScore=106.9195;InbreedingCoeff=0.6036;MQ=68.84;MQ0=12;MQRankSum=-2.709;QD=7.34;ReadPosRankSum=1.048;VQSLOD=0.8308;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:17,0:18:13.61:14,0,36	1/1:3,1:5:6.02:102,6,0	./.	./.	0/0:20,0:19:12.03:0,12,199	1/1:11,6:17:6.02:122,6,0	1/1:18,6:23:12.04:233,12,0	0/0:15,0:14:8.82:0,9,119	0/1:8,2:17:32.22:59,0,32	0/0:13,0:13:15.52:0,16,355	0/0:20,0:20:8.06:0,8,106	1/1:12,1:15:9.01:130,9,0	0/0:11,0:12:23.21:0,23,561	1/1:10,3:13:8.94:131,9,0	1/1:14,5:19:12.02:173,12,0	1/1:9,6:17:21.07:384,21,0	1/1:22,12:33:8:167,8,0	0/0:15,0:14:24.08:0,24,491	./.	1/1:7,7:13:9.03:181,9,0	1/1:27,0:26:6.01:65,6,0	1/1:7,4:10:6.02:122,6,0	0/0:16,0:18:33.11:0,33,759	0/0:26,0:32:63.21:0,63,1381	1/1:9,2:11:6.02:121,6,0	1/1:18,0:18:3.01:51,3,0	1/1:12,2:13:6.02:121,6,0	1/1:4,1:4:3.01:55,3,0
chr10	68278955	.	G	GA	895.67	PASS	AB=0.714;AC=6;AF=0.107;AN=56;BaseQRankSum=-4.835;DP=490;FS=6.307;HRun=7;HaplotypeScore=40.9832;InbreedingCoeff=0.5741;MQ=54.91;MQ0=35;MQRankSum=-2.859;QD=18.28;ReadPosRankSum=-2.716;VQSLOD=2.3267;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:41:99:0,114,1095	0/0:5,0:4:6.01:0,6,56	0/1:4,1:3:22.36:30,0,22	0/0:15,0:3:2.90:0,3,28	0/0:25,0:24:45.05:0,45,433	0/0:21,0:20:48.04:0,48,450	0/0:23,0:17:36.05:0,36,347	1/1:6,16:20:19.58:515,20,0	0/0:10,0:9:27.04:0,27,261	0/1:2,6:8:7.91:196,0,8	1/1:2,11:12:24.07:290,24,0	0/0:12,0:12:33.04:0,33,313	0/0:15,0:15:36.01:0,36,339	0/0:18,0:18:45.07:0,45,435	0/0:18,0:17:39.06:0,39,377	0/0:19,0:19:48.08:0,48,463	0/0:30,0:28:66.10:0,66,637	0/0:20,0:18:51.05:0,51,484	0/0:20,0:18:48.07:0,48,461	0/0:13,0:12:30.04:0,30,288	0/0:11,1:9:21.03:0,21,203	0/0:12,0:9:18.01:0,18,168	0/0:18,0:17:42.07:0,42,405	0/0:28,0:26:60.10:0,60,579	0/0:17,0:15:39.04:0,39,372	0/0:14,0:12:33.04:0,33,314	0/0:29,0:29:75.10:0,75,718	0/0:4,0:4:9.01:0,9,87
chr10	68279059	.	TA	T	4130.67	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=2.335;DP=494;FS=0.858;HRun=11;HaplotypeScore=60.9778;InbreedingCoeff=0.9651;MQ=68.45;MQ0=8;MQRankSum=0.634;QD=16.52;ReadPosRankSum=2.124;VQSLOD=4.5070;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,1:21:38.52:0,39,615	1/1:5,2:8:16.86:114,17,0	0/0:34,1:15:12.14:0,12,91	0/0:52,0:22:9.54:0,10,113	0/0:24,3:28:24.50:0,24,655	1/1:4,6:11:14.02:104,14,0	1/1:0,8:9:23.01:178,23,0	0/0:21,0:21:38.42:0,38,161	0/0:5,0:5:15.04:0,15,160	0/0:17,0:17:20.14:0,20,335	0/0:15,1:17:17.26:0,17,360	1/1:2,9:11:20.97:172,21,0	0/0:11,0:11:33.08:0,33,345	1/1:7,10:16:29.95:245,30,0	1/1:3,5:9:18.83:134,19,0	1/1:2,10:12:23.90:197,24,0	1/1:2,21:23:59.91:492,60,0	1/1:5,15:22:49.01:380,49,0	1/1:2,12:15:37.99:301,38,0	1/1:6,20:26:37.03:445,37,0	1/1:1,6:7:11.98:98,12,0	1/1:1,5:7:14.02:104,14,0	0/0:21,0:22:33.24:0,33,535	0/0:14,0:15:32.86:0,33,319	1/1:6,15:21:50.90:413,51,0	1/1:5,15:22:28.78:358,29,0	1/1:6,12:18:15.72:272,16,0	1/1:5,6:11:14.97:123,15,0
chr10	68279065	.	A	AAC	825.12	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-4.913;DP=508;FS=0.000;HRun=0;HaplotypeScore=83.2503;InbreedingCoeff=0.9200;MQ=66.04;MQ0=11;MQRankSum=-0.404;QD=37.51;ReadPosRankSum=-4.244;VQSLOD=4.3582;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:69.19:0,69,957	0/0:7,0:7:17.98:0,18,153	0/0:48,0:15:23.55:0,24,157	0/0:57,0:22:13.88:0,14,186	0/0:28,0:28:83.89:0,84,1108	0/0:9,0:9:20.96:0,21,173	0/0:9,0:9:23.94:0,24,192	1/1:3,19:22:57.16:920,57,0	0/0:6,0:6:15.05:0,15,220	0/0:14,0:14:39.11:0,39,535	0/0:14,0:14:41.79:0,42,565	0/0:10,0:10:20.95:0,21,170	0/0:12,0:12:36.10:0,36,494	0/0:16,0:15:32.92:0,33,267	0/0:12,0:12:35.95:0,36,300	0/0:14,0:14:29.95:0,30,247	0/0:23,0:23:62.85:0,63,508	0/0:22,0:22:56.87:0,57,458	0/0:16,0:16:41.90:0,42,339	0/0:28,0:27:80.81:0,81,657	0/0:8,0:8:14.98:0,15,124	0/0:7,0:7:17.96:0,18,147	0/0:22,0:22:62.44:0,62,822	0/0:12,0:12:35.78:0,36,478	0/0:20,0:20:53.89:0,54,440	0/0:23,0:23:65.88:0,66,542	0/0:16,0:16:44.92:0,45,370	0/0:10,0:10:20.97:0,21,180
chr10	68280179	.	T	TA	1628.50	PASS	AB=0.934;AC=43;AF=0.768;AN=56;BaseQRankSum=-0.277;DP=359;FS=12.441;HRun=13;HaplotypeScore=72.7101;InbreedingCoeff=0.2437;MQ=75.36;MQ0=5;MQRankSum=-0.974;QD=5.84;ReadPosRankSum=-2.672;VQSLOD=0.4474;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:19,1:20:0.26:82,0,0	1/1:3,0:3:2.94:18,3,0	0/0:41,0:17:18.62:0,19,89	0/0:31,0:14:11.21:0,11,58	1/1:16,0:16:18.02:109,18,0	0/0:7,0:7:2.45:0,2,9	0/1:13,0:13:6.26:49,0,6	1/1:16,0:16:17.19:152,17,0	0/1:12,0:12:8.38:21,0,8	1/1:16,0:16:24.19:179,24,0	1/1:4,0:4:8.34:40,8,0	0/1:8,0:8:2.05:14,0,2	1/1:13,0:12:11.85:83,12,0	1/1:4,0:4:6.78:22,7,0	0/1:13,0:13:11.50:20,0,12	1/1:10,0:10:12.83:97,13,0	1/1:17,0:18:20.95:120,21,0	1/1:11,1:12:11.13:67,11,0	1/1:10,0:10:8.66:51,9,0	1/1:13,0:13:17.90:137,18,0	0/1:7,0:7:11.50:13,0,12	1/1:6,0:5:0.89:2,1,0	1/1:7,4:11:9.82:74,10,0	0/1:7,17:24:2.56:121,0,3	1/1:8,0:8:12.72:84,13,0	1/1:7,0:7:0.69:59,1,0	1/1:9,0:9:14.78:99,15,0	1/1:6,0:6:8.90:61,9,0
chr10	68280192	.	A	AAG	2625.14	PASS	AB=0.720;AC=40;AF=0.714;AN=56;BaseQRankSum=-2.560;DP=399;FS=0.000;HRun=0;HaplotypeScore=72.2004;InbreedingCoeff=0.1547;MQ=64.04;MQ0=7;MQRankSum=-0.969;QD=8.87;ReadPosRankSum=0.943;VQSLOD=3.0297;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:6,13:23:0.08:187,0,0	1/1:1,0:2:2.89:18,3,0	0/0:49,0:15:30.53:0,31,171	0/0:31,0:11:6.97:0,7,69	1/1:4,9:17:23.46:277,23,0	0/1:4,0:12:3.75:14,0,4	0/1:10,0:17:1.42:97,0,1	0/1:18,0:21:42.58:43,0,43	0/1:5,4:14:7.07:94,0,7	1/1:5,13:20:27.54:393,28,0	1/1:8,0:9:13.81:74,14,0	1/1:4,0:10:1.84:66,2,0	0/1:12,0:11:5.95:6,0,87	1/1:1,0:6:12.39:94,12,0	0/1:4,5:13:0.91:75,0,1	1/1:5,0:8:15.34:112,15,0	1/1:9,0:14:22.76:145,23,0	0/1:2,13:17:7.54:123,0,8	1/1:4,4:10:23.79:207,24,0	1/1:9,1:10:1.41:160,1,0	0/1:2,2:4:11.44:45,0,11	1/1:6,0:5:0.89:2,1,0	0/1:11,0:12:3.54:4,0,25	0/0:23,0:23:2.69:0,3,63	1/1:8,0:9:12.84:99,13,0	1/1:3,9:13:9.62:150,10,0	1/1:10,0:10:17.20:146,17,0	1/1:3,4:7:11.97:144,12,0
chr10	68280268	.	GA	G	425.90	PASS	AB=0.843;AC=9;AF=0.167;AN=54;BaseQRankSum=-0.483;DP=371;FS=0.731;HRun=11;HaplotypeScore=91.5151;InbreedingCoeff=0.2065;MQ=51.62;MQ0=20;MQRankSum=-2.096;QD=5.53;ReadPosRankSum=-1.123;VQSLOD=1.7556;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:43:95.83:0,96,953	0/1:4,0:4:15.25:15,0,55	0/0:25,0:4:5.68:0,6,29	0/0:18,0:5:5.72:0,6,54	0/0:16,0:16:27.47:0,27,256	0/0:9,1:11:0.32:0,0,154	0/0:8,0:6:6.02:0,6,64	1/1:8,8:15:31.31:231,31,0	0/1:5,7:10:7.77:117,0,8	0/1:9,4:10:68.78:69,0,100	1/1:2,10:11:3.33:108,3,0	0/0:11,0:11:15.31:0,15,102	0/0:12,0:12:21.03:0,21,210	0/0:9,0:8:11.75:0,12,96	0/0:13,0:13:28.06:0,28,256	0/0:11,0:11:21.52:0,22,152	0/0:13,0:13:19.23:0,19,181	0/0:12,0:12:18.05:0,18,192	0/0:16,0:13:25.37:0,25,246	0/0:13,0:12:12.49:0,12,123	./.	0/0:2,0:4:5.34:0,5,28	0/0:9,0:9:18.04:0,18,191	0/0:18,0:18:51.08:0,51,518	0/0:13,0:9:18.99:0,19,194	0/1:8,1:7:15.15:15,0,55	0/0:14,0:11:18.40:0,18,158	0/1:10,1:8:9.65:10,0,97
chr10	68280284	.	CA	C	255.89	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-0.787;DP=357;FS=3.984;HRun=10;HaplotypeScore=63.9613;InbreedingCoeff=0.4971;MQ=56.44;MQ0=1;MQRankSum=0.079;QD=13.47;ReadPosRankSum=-0.590;VQSLOD=3.5491;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:45:92.94:0,93,960	0/0:4,0:4:5.92:0,6,38	0/0:18,0:6:14.50:0,14,103	0/0:15,0:8:11.52:0,12,115	0/0:15,0:15:33.07:0,33,356	0/0:13,0:12:18.27:0,18,122	0/0:7,0:6:10.47:0,10,67	1/1:5,14:19:41.64:350,42,0	0/0:10,0:12:20.51:0,21,138	0/0:15,0:13:26.65:0,27,169	0/0:12,0:9:6.76:0,7,38	0/0:7,0:7:8.89:0,9,60	0/0:9,0:9:20.27:0,20,206	0/0:7,0:6:11.91:0,12,86	0/0:14,0:13:21.31:0,21,152	0/0:13,0:13:19.62:0,20,123	0/0:12,0:12:6.41:0,6,41	0/0:11,0:11:12.80:0,13,86	0/0:16,0:13:17.52:0,18,110	0/0:11,0:8:4.69:0,5,38	0/0:1,0:1:0.47:0,0,1	0/0:3,0:3:3.85:0,4,22	0/0:9,1:10:21.06:0,21,233	0/0:22,0:22:51.13:0,51,557	0/0:10,0:7:9.80:0,10,59	0/0:14,0:12:12.86:0,13,73	0/0:11,0:8:13.59:0,14,85	0/0:10,0:7:11.92:0,12,85
chr10	68280538	.	C	CT	469.33	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-4.588;DP=498;FS=26.184;HRun=9;HaplotypeScore=63.1093;InbreedingCoeff=0.9254;MQ=85.90;MQ0=3;MQRankSum=1.422;QD=16.18;ReadPosRankSum=-3.610;VQSLOD=1.4484;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:31,1:32:51.01:0,51,665	0/0:9,0:9:21:0,21,182	0/0:54,0:41:38.44:0,38,311	0/0:38,0:23:24.34:0,24,180	0/0:16,0:16:41.98:0,42,361	0/0:14,0:14:41.92:0,42,356	0/0:5,0:5:9:0,9,78	1/1:11,18:29:51.14:564,51,0	0/0:11,0:11:32.98:0,33,283	0/0:15,0:15:35.99:0,36,313	0/0:12,0:12:29.98:0,30,260	0/0:13,0:13:35.97:0,36,309	0/0:11,0:11:32.99:0,33,284	0/0:12,0:12:23.99:0,24,208	0/0:13,0:13:29.98:0,30,257	0/0:12,0:12:29.97:0,30,257	0/0:24,0:24:65.83:0,66,561	0/0:20,0:20:53.89:0,54,452	0/0:14,0:14:38.99:0,39,338	0/0:21,0:21:59.95:0,60,512	0/0:6,0:6:17.95:0,18,146	0/0:11,0:10:23.99:0,24,208	0/0:15,0:15:41.95:0,42,358	0/0:10,0:10:26.98:0,27,234	0/0:15,0:15:35.99:0,36,312	0/0:18,0:19:44.21:0,44,372	0/0:26,0:26:65.96:0,66,569	0/0:20,0:20:56.99:0,57,495
chr10	68281175	.	CTTG	C	444.22	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.519;DP=695;FS=1.152;HRun=0;HaplotypeScore=94.3586;InbreedingCoeff=0.9916;MQ=95.54;MQ0=0;MQRankSum=-1.818;QD=31.73;ReadPosRankSum=2.561;VQSLOD=3.6088;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:66.23:0,66,1453	0/0:14,0:14:39.13:0,39,850	0/0:39,0:39:99:0,101,2045	0/0:29,0:29:72.24:0,72,1470	0/0:27,0:27:69.24:0,69,1541	0/0:35,0:35:96.33:0,96,2125	0/0:20,0:20:57.20:0,57,1272	0/0:34,0:33:96.32:0,96,2079	0/0:36,0:36:99:0,105,2284	0/0:38,0:38:99:0,111,2452	0/0:19,0:19:54.19:0,54,1189	0/0:24,0:24:72.25:0,72,1559	0/0:34,0:34:96.33:0,96,2069	0/0:14,0:14:36.12:0,36,788	0/0:25,0:25:72.25:0,72,1608	0/0:26,0:26:78.27:0,78,1634	0/0:20,0:20:57.20:0,57,1273	1/1:1,13:14:33.11:539,33,0	0/0:25,0:25:69.23:0,69,1480	0/0:27,0:27:72.25:0,72,1556	0/0:32,0:32:93.32:0,93,2040	0/0:16,0:16:45.15:0,45,987	0/0:15,0:15:45.15:0,45,1005	0/0:19,0:19:51.17:0,51,1098	0/0:26,0:26:72.25:0,72,1594	0/0:26,0:26:72.25:0,72,1598	0/0:29,0:29:78.27:0,78,1722	0/0:9,0:9:18.06:0,18,402
chr10	68282613	.	T	TA	1099.08	PASS	AB=0.971;AC=10;AF=0.179;AN=56;BaseQRankSum=2.373;DP=631;FS=2.347;HRun=11;HaplotypeScore=102.2619;InbreedingCoeff=0.7445;MQ=71.89;MQ0=1;MQRankSum=-2.979;QD=9.31;ReadPosRankSum=-1.761;VQSLOD=2.6538;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:64.40:0,64,494	0/0:16,0:16:38.82:0,39,302	0/0:18,0:13:19.73:0,20,142	0/1:19,0:15:23.73:24,0,76	0/0:39,2:42:67.16:0,67,695	0/0:23,0:23:56.70:0,57,435	0/0:21,0:21:43.82:0,44,331	0/0:25,1:26:20.68:0,21,417	1/1:5,0:21:31.70:159,32,0	1/1:13,11:24:23.14:404,23,0	1/1:10,11:22:7.67:385,8,0	0/0:14,0:14:14.84:0,15,116	0/0:27,0:27:42.59:0,43,460	0/1:15,1:16:3.55:4,0,159	0/0:23,0:24:34.81:0,35,261	0/0:26,0:26:38.67:0,39,301	0/0:26,0:26:28.10:0,28,389	1/1:7,8:15:9.94:281,10,0	0/0:17,0:17:38.68:0,39,289	0/0:22,0:22:34.60:0,35,368	0/0:26,0:25:29.81:0,30,232	0/0:20,0:20:35.19:0,35,263	0/0:28,0:28:68.71:0,69,534	0/0:18,0:18:38.61:0,39,301	0/0:22,0:23:49.80:0,50,377	0/0:24,0:24:27.23:0,27,325	0/0:32,0:33:55.73:0,56,424	0/0:8,0:8:14.93:0,15,116
chr10	68282641	.	C	CA	6963.84	PASS	AB=0.563;AC=31;AF=0.554;AN=56;BaseQRankSum=-11.938;DP=644;FS=4.257;HRun=10;HaplotypeScore=76.7153;InbreedingCoeff=0.8835;MQ=63.73;MQ0=8;MQRankSum=0.758;QD=19.24;ReadPosRankSum=0.557;VQSLOD=5.7276;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,1:30:33.87:0,34,484	1/1:1,13:14:33.08:352,33,0	0/0:18,0:11:7.84:0,8,38	0/0:13,0:6:5.17:0,5,17	0/0:38,0:38:95.70:0,96,771	1/1:10,18:28:35.49:573,35,0	1/1:1,13:15:41.94:430,42,0	0/0:7,0:26:36.09:0,36,105	0/0:21,0:21:25.74:0,26,201	0/0:2,0:18:23.89:0,24,76	0/0:3,0:15:23.73:0,24,69	1/1:1,16:17:39.10:415,39,0	0/0:26,0:28:51.97:0,52,404	1/1:6,9:15:20.88:204,21,0	1/1:3,24:27:45.11:480,45,0	1/1:7,26:33:38.48:615,38,0	1/1:10,17:27:6.81:378,7,0	0/0:9,0:18:15.55:0,16,45	1/1:8,10:16:34.82:321,35,0	1/1:2,27:31:74.15:749,74,0	1/1:2,18:20:32.95:334,33,0	1/1:6,18:26:50.82:503,51,0	0/0:34,0:35:79.88:0,80,643	0/0:15,0:17:34.96:0,35,274	1/1:5,22:27:35.51:583,36,0	1/1:6,24:33:39.34:635,39,0	1/1:6,14:20:11.28:308,11,0	0/1:2,7:9:12.61:84,0,13
chr10	68284079	.	G	GA	152.33	PASS	AB=0.875;AC=5;AF=0.089;AN=56;BaseQRankSum=-0.597;DP=341;FS=0.000;HRun=11;HaplotypeScore=40.5197;InbreedingCoeff=0.4755;MQ=73.24;MQ0=2;MQRankSum=0.215;QD=4.35;ReadPosRankSum=-0.098;VQSLOD=-0.3606;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:21:43.81:0,44,331	0/0:7,0:6:17.89:0,18,136	1/1:13,0:8:2.22:19,2,0	0/0:11,0:10:13.57:0,14,81	0/0:9,0:11:21.99:0,22,151	0/0:19,1:20:20.36:0,20,341	0/0:17,0:17:26.62:0,27,247	0/0:20,0:23:39.05:0,39,288	1/1:4,11:15:3.82:220,4,0	0/0:11,0:11:23.90:0,24,186	0/0:7,0:8:13.96:0,14,99	0/0:14,0:14:29.86:0,30,231	0/0:9,0:9:26.51:0,27,195	0/0:6,0:6:11.93:0,12,93	0/0:12,0:13:7.97:0,8,190	0/1:6,1:7:15.51:16,0,78	0/0:22,0:25:59.89:0,60,436	0/0:10,0:10:23.90:0,24,186	0/0:10,0:11:28.92:0,29,212	0/0:3,0:4:5.01:0,5,29	0/0:17,0:17:35.13:0,35,277	0/0:7,0:7:17.92:0,18,137	0/0:6,0:6:17.93:0,18,139	0/0:16,0:16:41.84:0,42,325	0/0:5,0:5:11.93:0,12,93	0/0:12,0:13:22.84:0,23,163	0/0:11,0:11:20.90:0,21,162	0/0:8,0:8:8.91:0,9,70
chr10	68284369	.	C	CT	635.52	PASS	AC=10;AF=0.192;AN=52;BaseQRankSum=-3.853;DP=239;FS=2.149;HRun=10;HaplotypeScore=25.7289;InbreedingCoeff=0.7290;MQ=58.02;MQ0=4;MQRankSum=0.600;QD=16.30;ReadPosRankSum=-0.503;VQSLOD=2.6937;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:32.88:0,33,263	0/0:8,0:8:17.95:0,18,145	1/1:5,0:4:2.37:9,2,0	0/0:7,0:6:5.65:0,6,49	0/0:8,0:8:14.97:0,15,123	0/0:7,0:7:11.98:0,12,98	0/0:4,0:4:5.99:0,6,49	0/0:18,0:16:26.93:0,27,218	1/1:2,0:2:2.97:20,3,0	1/1:3,9:12:27.07:287,27,0	1/1:3,6:9:11.99:116,12,0	0/0:11,0:12:7.76:0,8,43	0/0:5,0:6:14:0,14,101	0/0:5,0:5:8.99:0,9,74	0/0:9,0:10:19.97:0,20,147	0/0:7,0:7:11.98:0,12,99	0/0:21,0:23:34.04:0,34,389	1/1:0,11:11:33.08:352,33,0	0/0:7,0:6:14.48:0,14,108	0/0:11,0:10:20.97:0,21,172	0/0:4,0:4:5.99:0,6,49	./.	0/0:4,0:4:2.99:0,3,25	./.	0/0:5,0:5:14.02:0,14,104	0/0:15,0:16:34.91:0,35,267	0/0:12,0:12:26.91:0,27,217	0/0:6,0:5:11.99:0,12,99
chr10	68284597	.	TTG	T	328.50	PASS	AB=0.943;AC=17;AF=0.304;AN=56;BaseQRankSum=3.274;DP=289;FS=54.901;HRun=0;HaplotypeScore=56.7904;InbreedingCoeff=-0.2858;MQ=56.48;MQ0=2;MQRankSum=1.707;QD=1.88;ReadPosRankSum=1.251;VQSLOD=-0.2865;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:16:2.54:0,3,195	0/1:7,0:7:6.78:7,0,49	0/1:11,0:5:13.84:14,0,34	0/0:7,0:6:2.90:0,3,18	0/0:14,0:14:9.24:0,9,205	0/1:11,1:12:20.99:57,0,21	0/1:13,2:13:38.25:38,0,110	0/1:15,0:13:3.89:4,0,187	0/0:2,0:2:3.40:0,3,18	0/0:10,0:10:25.29:0,25,191	0/0:10,0:10:29.08:0,29,208	0/1:10,1:11:37.44:37,0,59	0/0:6,0:5:7.20:0,7,49	0/1:9,1:10:5.98:6,0,19	0/1:11,1:12:23.88:32,0,24	1/1:7,1:8:7.05:47,7,0	0/1:16,2:15:33.45:107,0,33	0/1:7,0:6:7.77:16,0,8	0/1:10,1:10:17.41:17,0,39	0/1:9,0:8:28.55:29,0,35	0/1:4,0:4:12.15:12,0,18	0/0:6,0:6:13.34:0,13,97	0/1:12,1:13:3.88:4,0,195	0/0:11,0:9:18.41:0,18,176	0/0:10,0:9:12.61:0,13,72	0/0:12,1:11:7.93:0,8,86	0/1:9,0:8:31.71:53,0,32	0/0:8,0:8:10.25:0,10,62
chr10	68284612	.	C	CT	260.26	PASS	AB=0.763;AC=1;AF=0.019;AN=54;BaseQRankSum=2.674;DP=283;FS=22.606;HRun=8;HaplotypeScore=49.8271;InbreedingCoeff=0.1718;MQ=44.79;MQ0=5;MQRankSum=-3.428;QD=8.97;ReadPosRankSum=0.237;VQSLOD=0.2406;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:16:36.08:0,36,478	0/0:6,0:6:14.72:0,15,202	./.	0/0:3,0:3:0.47:0,0,1	0/0:16,0:16:27.07:0,27,349	0/0:11,0:10:18.05:0,18,236	0/0:15,0:13:36.52:0,37,436	0/1:20,9:27:99:334,0,284	0/0:8,0:7:4.35:0,4,45	0/0:11,0:11:27.08:0,27,355	0/0:10,0:9:27.03:0,27,328	0/0:8,0:8:9.02:0,9,108	0/0:9,0:8:15.05:0,15,189	0/0:6,0:6:15.05:0,15,198	0/0:8,0:8:17.89:0,18,222	0/0:3,0:3:5.93:0,6,79	0/0:20,0:17:36.02:0,36,433	0/0:7,0:7:11.69:0,12,129	0/0:9,0:8:21.07:0,21,292	0/0:7,0:6:15.05:0,15,205	0/0:7,0:7:18.06:0,18,242	0/0:7,0:7:21.03:0,21,263	0/0:16,0:16:36.07:0,36,463	0/0:14,0:13:21.07:0,21,287	0/0:10,0:9:14.98:0,15,245	0/0:10,0:9:15.05:0,15,208	0/0:9,0:7:21.06:0,21,268	0/0:6,0:6:11.93:0,12,132
chr10	68284785	.	C	CT	1534.57	PASS	AB=0.811;AC=11;AF=0.196;AN=56;BaseQRankSum=-4.686;DP=528;FS=6.396;HRun=12;HaplotypeScore=118.7672;InbreedingCoeff=0.5852;MQ=57.12;MQ0=1;MQRankSum=-3.396;QD=7.87;ReadPosRankSum=-2.218;VQSLOD=1.9208;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,2:35:26.88:0,27,438	0/0:5,0:6:10.98:0,11,72	0/0:9,0:8:6.37:0,6,40	0/0:5,0:9:13.33:0,13,51	0/0:21,0:21:38.71:0,39,282	0/0:13,0:14:25.88:0,26,181	0/1:13,3:16:28.60:29,0,143	1/1:35,35:69:55.11:806,55,0	1/1:17,3:35:18.68:200,19,0	1/1:12,2:22:46.49:309,46,0	1/1:5,0:14:20.09:108,20,0	0/0:17,0:17:37.79:0,38,267	0/0:11,0:11:17.81:0,18,129	0/0:8,0:8:20.86:0,21,151	0/0:13,0:15:5.47:0,5,185	0/0:17,1:18:11.62:0,12,239	0/0:27,0:27:44.53:0,45,319	0/1:15,11:27:3.25:241,0,3	0/0:19,0:19:31.78:0,32,224	0/0:12,1:13:3.63:0,4,190	0/0:13,0:14:19.04:0,19,135	0/0:12,1:14:0.76:0,1,166	0/1:8,1:9:9.48:9,0,95	0/0:24,0:25:44.64:0,45,322	0/0:9,0:9:11.91:0,12,88	0/0:19,0:20:32.34:0,32,292	0/0:15,0:13:23.80:0,24,175	0/0:10,0:10:20.84:0,21,153
chr10	68284934	.	A	AG	10892.82	PASS	AB=1.000;AC=43;AF=0.768;AN=56;BaseQRankSum=-8.526;DP=484;FS=0.459;HRun=5;HaplotypeScore=53.1862;InbreedingCoeff=0.8890;MQ=72.81;MQ0=0;MQRankSum=-1.559;QD=29.13;ReadPosRankSum=1.357;VQSLOD=5.1841;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:66.10:0,66,666	1/1:1,6:7:12.04:158,12,0	0/0:13,0:14:21.94:0,22,148	0/1:15,0:15:26.28:26,0,61	0/0:13,0:13:24.06:0,24,257	1/1:0,14:14:27.05:336,27,0	1/1:2,18:20:45.08:570,45,0	1/1:2,21:23:63.17:787,63,0	1/1:2,20:22:54.13:690,54,0	1/1:1,15:16:42.07:502,42,0	1/1:2,10:12:21.06:265,21,0	1/1:0,23:23:66.21:868,66,0	0/0:14,0:14:36.03:0,36,365	1/1:1,10:11:30.10:395,30,0	1/1:2,17:19:45.15:590,45,0	1/1:1,20:21:54.18:710,54,0	1/1:5,35:40:90.29:1183,90,0	1/1:1,16:17:48.16:631,48,0	1/1:2,13:15:42.02:485,42,0	1/1:0,9:8:24.02:295,24,0	1/1:4,24:29:42.14:551,42,0	1/1:2,4:6:18.05:213,18,0	0/0:15,0:15:32.05:0,32,315	0/0:27,0:27:72.10:0,72,751	1/1:0,11:11:21.03:255,21,0	1/1:1,15:15:39.05:458,39,0	1/1:0,18:18:51.17:671,51,0	1/1:1,9:10:21:255,21,0
chr10	68285153	.	CT	C	847.84	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=6.383;DP=512;FS=11.839;HRun=11;HaplotypeScore=54.1809;InbreedingCoeff=0.9417;MQ=56.87;MQ0=3;MQRankSum=1.610;QD=12.85;ReadPosRankSum=0.418;VQSLOD=2.0522;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,2:29:41.99:0,42,646	0/0:10,0:9:24.05:0,24,249	0/0:10,0:6:9.02:0,9,96	0/0:9,0:7:12.03:0,12,128	0/0:32,2:33:25.87:0,26,673	0/0:18,0:18:39.10:0,39,416	0/0:13,0:13:30.08:0,30,320	0/0:39,1:39:72.02:0,72,943	0/0:17,0:17:42.07:0,42,436	1/1:10,15:25:44.88:369,45,0	1/1:5,16:21:32.91:271,33,0	0/0:15,0:16:29.87:0,30,290	0/0:9,0:9:24.06:0,24,256	0/0:13,0:13:24.05:0,24,248	0/0:18,0:18:36.08:0,36,378	0/0:14,0:14:31.88:0,32,317	0/0:26,0:25:57.14:0,57,607	1/1:2,18:19:12.41:348,12,0	0/0:24,0:25:54.84:0,55,548	0/0:27,0:28:71.96:0,72,723	0/0:10,0:10:24.04:0,24,247	0/0:12,0:12:27.02:0,27,266	0/0:9,0:10:27.06:0,27,279	0/0:7,0:9:15.04:0,15,160	0/0:20,1:21:29.41:0,29,494	0/0:22,2:23:13.82:0,14,535	0/0:14,0:14:39.08:0,39,405	0/0:17,0:17:51.13:0,51,544
chr10	68286392	.	GAGAAAGAA	G	3182.68	PASS	AB=0.850;AC=34;AF=0.654;AN=52;BaseQRankSum=-1.742;DP=502;FS=0.577;HRun=0;HaplotypeScore=127.2272;InbreedingCoeff=0.6488;MQ=56.45;MQ0=6;MQRankSum=0.391;QD=10.75;ReadPosRankSum=-2.021;VQSLOD=2.2151;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:49.53:0,50,933	1/1:4,5:8:2.13:73,2,0	./.	./.	0/0:6,0:24:24.43:0,24,242	1/1:4,13:17:9.03:220,9,0	1/1:17,0:17:12.04:223,12,0	0/0:20,0:16:7.62:0,8,38	0/1:19,0:19:3.72:155,0,4	0/0:9,0:26:46.43:0,46,357	0/1:12,0:21:17.17:17,0,145	1/1:13,0:13:12.03:171,12,0	0/0:24,0:24:36.11:0,36,1044	1/1:5,9:14:3.01:72,3,0	1/1:12,0:12:10.68:117,11,0	1/1:11,7:18:3.01:72,3,0	1/1:11,14:22:2.87:38,3,0	0/0:25,0:27:51.62:0,52,837	1/1:8,7:15:21:338,21,0	1/1:11,13:24:27.09:474,27,0	1/1:10,0:10:9.03:146,9,0	1/1:2,10:12:17.89:204,18,0	0/0:24,0:24:36.06:0,36,1096	0/0:22,0:22:33.11:0,33,1041	1/1:7,7:14:6.02:147,6,0	1/1:9,13:22:36.10:643,36,0	1/1:11,12:23:2.70:75,3,0	1/1:2,9:11:9.03:187,9,0
chr10	68286413	.	A	AG	240.13	PASS	AB=0.880;AC=2;AF=0.038;AN=52;BaseQRankSum=1.442;DP=506;FS=1.200;HRun=1;HaplotypeScore=93.4138;InbreedingCoeff=-0.0448;MQ=56.34;MQ0=8;MQRankSum=-2.565;QD=5.86;ReadPosRankSum=0.255;VQSLOD=0.4817;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:66.69:0,67,597	0/0:8,0:8:17.31:0,17,149	./.	./.	0/0:25,0:25:51.14:0,51,624	0/0:22,0:22:35.66:0,36,363	0/0:24,0:24:48.09:0,48,579	0/0:24,0:20:54.16:0,54,675	0/1:13,6:19:99:312,0,156	0/0:30,0:29:82.87:0,83,721	0/0:25,0:25:71.72:0,72,780	0/0:12,0:12:36.07:0,36,411	0/0:21,0:21:63.16:0,63,764	0/0:10,0:10:5.91:0,6,54	0/0:15,0:15:45.12:0,45,544	0/0:13,0:13:20.96:0,21,249	0/1:22,0:20:11.16:11,0,207	0/0:29,0:28:68.90:0,69,613	0/0:17,0:15:44.74:0,45,497	0/0:26,0:26:68.79:0,69,742	0/0:9,0:9:24.06:0,24,295	0/0:12,0:12:27.09:0,27,342	0/0:22,0:22:66.19:0,66,817	0/0:24,0:24:69.15:0,69,833	0/0:16,0:15:26.76:0,27,289	0/0:18,0:18:50.62:0,51,532	0/0:21,0:21:26.84:0,27,282	0/0:12,0:12:11.90:0,12,114
chr10	68286458	.	G	GA	476.36	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.745;DP=643;FS=10.170;HRun=7;HaplotypeScore=94.8225;InbreedingCoeff=0.9924;MQ=72.83;MQ0=0;MQRankSum=-3.795;QD=26.46;ReadPosRankSum=1.031;VQSLOD=3.5169;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:75.05:0,75,708	0/0:9,0:9:24.04:0,24,232	0/0:21,0:19:33.23:0,33,352	0/0:20,0:18:39.76:0,40,393	0/0:27,0:26:69.11:0,69,666	0/0:26,0:26:57.04:0,57,540	0/0:24,0:24:60.07:0,60,573	0/0:40,0:40:90.08:0,90,856	1/1:2,16:18:48.14:571,48,0	0/0:22,0:23:62.12:0,62,585	0/0:29,0:30:83.17:0,83,788	0/0:15,0:15:45.05:0,45,428	0/0:17,0:17:48.07:0,48,464	0/0:11,0:11:21.02:0,21,197	0/0:26,0:26:78.11:0,78,748	0/0:16,0:16:27.04:0,27,261	0/0:23,0:23:48.07:0,48,463	0/0:34,0:34:84.07:0,84,796	0/0:21,0:21:51.08:0,51,492	0/0:30,0:30:75.11:0,75,724	0/0:17,0:17:45.07:0,45,435	0/0:15,0:15:36.06:0,36,347	0/0:24,0:24:69.11:0,69,666	0/0:23,0:23:51.08:0,51,493	0/0:20,0:20:45.07:0,45,435	0/0:30,0:30:84.14:0,84,811	0/0:22,0:22:57.09:0,57,550	0/0:33,0:33:87.14:0,87,840
chr10	68287053	.	TGCCAGCTA	T	1660.99	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.323;DP=558;FS=1.819;HRun=0;HaplotypeScore=137.9224;InbreedingCoeff=0.9035;MQ=94.19;MQ0=0;MQRankSum=-7.585;QD=69.21;ReadPosRankSum=2.123;VQSLOD=4.0701;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,99,4202	0/0:5,0:5:15.04:0,15,553	0/0:25,0:25:66.22:0,66,2296	0/0:29,0:29:78.26:0,78,2809	0/0:7,0:7:21.07:0,21,842	0/0:16,0:16:45.15:0,45,1874	0/0:45,0:45:99:0,120,5050	0/0:29,0:29:75.24:0,75,3013	1/1:3,21:24:63.22:1756,63,0	0/0:15,0:15:45.15:0,45,1896	0/0:7,0:7:18.06:0,18,782	0/0:24,0:24:72.25:0,72,3121	0/0:20,0:20:60.21:0,60,2597	0/0:26,0:26:75.26:0,75,3282	0/0:22,0:22:66.21:0,66,2760	0/0:26,0:26:72.25:0,72,3168	0/0:28,0:28:78.27:0,78,3273	0/0:21,0:21:60.21:0,60,2639	0/0:15,0:15:39.13:0,39,1516	0/0:5,0:5:15.05:0,15,659	0/0:30,0:30:90.31:0,90,3844	0/0:3,0:3:9.03:0,9,395	0/0:13,0:13:39.13:0,39,1609	0/0:43,0:43:99:0,126,5322	0/0:10,0:10:30.10:0,30,1319	0/0:7,0:7:21.07:0,21,853	0/0:16,0:16:39.13:0,39,1674	0/0:12,0:12:36.12:0,36,1584
chr10	68287331	.	GAAA	G	493.28	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=1.804;DP=487;FS=0.000;HRun=7;HaplotypeScore=97.5993;InbreedingCoeff=0.7900;MQ=49.92;MQ0=20;MQRankSum=-3.452;QD=21.45;ReadPosRankSum=-3.399;VQSLOD=0.2424;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:22:44.82:0,45,855	0/0:9,0:9:21.07:0,21,306	0/0:33,0:10:22.57:0,23,324	0/0:29,0:8:17.48:0,17,190	0/0:36,0:33:85.34:0,85,1580	0/0:17,0:15:41.51:0,42,591	0/0:9,0:8:17.25:0,17,219	1/1:9,13:21:37.33:588,37,0	0/0:8,0:8:8.11:0,8,187	0/0:26,0:23:59.45:0,59,1028	0/0:21,0:21:51.56:0,52,930	0/0:19,0:17:30.32:0,30,432	0/0:16,0:16:39.09:0,39,822	0/0:15,0:15:33.11:0,33,546	0/0:20,0:20:45.48:0,45,666	0/0:13,0:12:24.08:0,24,401	0/0:20,0:19:48.50:0,48,725	0/0:5,0:5:0.67:0,1,2	0/0:20,0:19:54.02:0,54,772	0/0:10,0:10:22.27:0,22,325	0/0:7,0:6:12:0,12,154	0/0:8,0:8:24.08:0,24,399	0/0:8,0:8:21.07:0,21,467	0/0:8,0:7:17.98:0,18,308	0/0:21,0:21:50.24:0,50,676	0/0:24,0:21:56.19:0,56,962	0/0:27,0:23:51.40:0,51,689	0/0:10,0:10:27.09:0,27,436
chr10	68287339	.	GA	G	4394.48	PASS	AB=0.542;AC=31;AF=0.554;AN=56;BaseQRankSum=-1.275;DP=471;FS=6.862;HRun=8;HaplotypeScore=62.2741;InbreedingCoeff=0.8453;MQ=55.26;MQ0=13;MQRankSum=-0.405;QD=18.23;ReadPosRankSum=3.242;VQSLOD=4.6469;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:20:46.50:0,46,545	1/1:4,5:9:17.93:161,18,0	0/0:36,0:11:17.42:0,17,196	0/0:29,0:9:14.67:0,15,112	0/0:35,0:34:86.54:0,87,969	1/1:5,14:17:17.05:299,17,0	1/1:6,5:10:2.58:155,3,0	0/0:23,0:21:45.11:0,45,373	0/0:10,0:10:12.03:0,12,139	0/0:19,0:19:48.15:0,48,577	0/0:20,0:20:51.16:0,51,616	1/1:6,8:12:24.01:231,24,0	0/0:16,0:16:36.11:0,36,433	1/1:2,14:15:33.05:319,33,0	1/1:5,14:18:12.13:315,12,0	0/1:2,11:12:12.20:179,0,12	1/1:7,12:17:38.65:358,39,0	0/0:5,0:5:0.37:0,0,2	1/1:2,18:19:46.31:481,46,0	1/1:2,6:8:17.06:172,17,0	1/1:3,4:6:8.33:85,8,0	1/1:1,7:8:21.03:203,21,0	0/0:8,0:8:21.06:0,21,254	0/0:8,0:7:15.05:0,15,181	1/1:6,15:21:27.30:344,27,0	1/1:4,21:24:23.88:530,24,0	1/1:10,12:19:34.29:346,34,0	1/1:2,8:10:10.73:216,11,0
chr10	68289034	.	A	ATGTGTG	5371.76	PASS	AB=0.691;AC=29;AF=0.630;AN=46;BaseQRankSum=3.777;DP=497;FS=3.249;HRun=0;HaplotypeScore=145.6565;InbreedingCoeff=0.4928;MQ=57.87;MQ0=3;MQRankSum=-7.085;QD=16.73;ReadPosRankSum=-2.496;VQSLOD=4.2830;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:27:36.12:0,36,706	./.	0/0:17,0:10:3.01:0,3,52	./.	0/0:24,0:24:42.13:0,42,799	0/1:19,3:23:55.72:90,0,56	1/1:10,5:16:3.01:38,3,0	1/1:33,0:33:29.93:477,30,0	0/1:7,0:18:71.92:77,0,72	1/1:25,0:26:35.61:840,36,0	1/1:17,0:19:9:141,9,0	1/1:10,9:20:12.04:330,12,0	0/0:19,0:17:36.09:0,36,667	./.	1/1:10,7:17:3.01:96,3,0	./.	1/1:13,1:21:18.06:353,18,0	1/1:15,0:15:2.16:368,2,0	1/1:7,4:13:24.08:595,24,0	0/1:9,12:27:46.82:241,0,47	0/0:14,3:20:0.47:0,0,1	./.	0/0:11,0:12:18.95:0,19,371	0/0:5,0:7:9.03:0,9,165	1/1:6,4:11:2.49:24,2,0	1/1:20,4:28:39.11:883,39,0	1/1:8,5:15:15.05:467,15,0	1/1:8,8:15:12.04:350,12,0
chr10	68289086	.	GTA	G	1897.17	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=6.720;DP=434;FS=1.864;HRun=0;HaplotypeScore=98.0969;InbreedingCoeff=0.7870;MQ=61.18;MQ0=8;MQRankSum=-0.075;QD=16.50;ReadPosRankSum=-4.050;VQSLOD=2.6206;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:72.22:0,72,1180	0/0:6,0:6:9.03:0,9,152	0/0:9,0:3:0:0,0,0	0/1:19,0:6:2.05:2,0,2	0/0:19,0:19:51.16:0,51,845	0/0:15,0:15:18.06:0,18,306	0/0:14,0:14:30.10:0,30,502	1/1:8,37:42:99:1369,108,0	0/0:16,0:16:36.05:0,36,457	1/1:3,13:16:36.09:435,36,0	1/1:5,15:20:12.04:160,12,0	0/0:15,0:15:24.05:0,24,342	0/0:14,0:13:30.10:0,30,505	0/0:8,0:8:12.04:0,12,208	0/0:10,0:10:12.04:0,12,200	0/0:6,0:6:12.03:0,12,182	0/0:22,0:22:42.14:0,42,686	1/1:1,13:14:6.01:80,6,0	0/0:13,0:13:29.56:0,30,402	0/0:16,0:16:11.24:0,11,180	0/0:11,0:11:12.04:0,12,203	0/0:4,0:4:6.01:0,6,73	0/0:16,0:16:39.12:0,39,635	0/0:6,0:6:12.04:0,12,197	0/0:9,0:9:15.05:0,15,260	0/0:24,0:23:13.59:0,14,771	0/0:18,0:18:39.13:0,39,669	0/0:19,0:18:45.63:0,46,767
chr10	68289463	.	CT	C	211.59	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.476;DP=395;FS=25.545;HRun=7;HaplotypeScore=40.2738;InbreedingCoeff=0.8263;MQ=65.20;MQ0=0;MQRankSum=0.512;QD=15.11;ReadPosRankSum=1.013;VQSLOD=1.6955;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:63.19:0,63,774	0/0:9,0:9:27.09:0,27,339	0/0:9,0:6:6.91:0,7,78	0/0:11,0:7:14.82:0,15,169	0/0:15,0:15:36.11:0,36,452	0/0:14,0:14:42.13:0,42,528	0/0:10,0:10:21.07:0,21,264	0/0:28,0:28:75.21:0,75,917	1/1:1,13:14:30.06:306,30,0	0/0:21,0:21:60.02:0,60,721	0/0:15,0:15:36.11:0,36,445	0/0:16,0:16:33.11:0,33,415	0/0:7,0:7:18.06:0,18,222	0/0:7,0:7:18.06:0,18,226	0/0:14,0:14:39.11:0,39,475	0/0:9,0:9:27.09:0,27,339	0/0:23,0:23:60.19:0,60,754	0/0:16,0:16:45.06:0,45,530	0/0:17,0:17:51.14:0,51,618	0/0:8,0:8:15.05:0,15,189	0/0:13,0:13:30.10:0,30,377	0/0:4,0:4:9.03:0,9,113	0/0:7,0:7:21.07:0,21,264	0/0:13,0:13:27.07:0,27,326	0/0:14,0:14:42.13:0,42,527	0/0:18,0:18:51.16:0,51,631	0/0:27,0:27:75.24:0,75,942	0/0:13,0:13:36.59:0,37,451
chr10	68289846	.	C	CCTTTT	4059.65	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-0.693;DP=441;FS=12.128;HRun=0;HaplotypeScore=90.7994;InbreedingCoeff=0.9296;MQ=71.24;MQ0=0;MQRankSum=-3.028;QD=39.80;ReadPosRankSum=-2.256;VQSLOD=2.5361;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:81.74:0,82,1336	0/0:4,0:4:6.02:0,6,113	0/0:33,0:22:25.99:0,26,290	0/0:21,0:10:8.21:0,8,119	0/0:24,0:24:47.18:0,47,864	0/0:15,0:15:27.05:0,27,467	0/0:14,0:14:24.08:0,24,453	1/1:34,0:33:60.18:1137,60,0	1/1:12,0:12:24.08:415,24,0	1/1:24,2:25:45.14:1011,45,0	1/1:11,4:15:33.58:870,34,0	0/0:8,0:8:12.04:0,12,213	0/0:8,0:8:15.05:0,15,277	0/0:10,0:10:12.03:0,12,195	0/0:9,0:9:18.06:0,18,314	0/0:8,0:8:21.06:0,21,320	0/0:16,0:16:39.13:0,39,695	1/1:12,3:14:27.07:626,27,0	0/0:18,0:18:22.92:0,23,585	0/0:11,0:11:27.09:0,27,503	0/0:8,0:8:18.06:0,18,322	0/0:7,0:7:12.03:0,12,178	0/0:14,0:14:33.10:0,33,564	0/0:16,0:16:42.13:0,42,757	0/0:20,0:20:39.10:0,39,621	0/0:18,0:18:33.11:0,33,624	0/0:12,0:11:30.05:0,30,439	0/0:11,0:11:24.08:0,24,418
chr10	68290072	.	A	ATTTG	2415.89	PASS	AB=0.947;AC=5;AF=0.089;AN=56;BaseQRankSum=-1.707;DP=500;FS=4.168;HRun=0;HaplotypeScore=82.7070;InbreedingCoeff=0.7281;MQ=70.23;MQ0=0;MQRankSum=-2.208;QD=37.17;ReadPosRankSum=1.649;VQSLOD=3.6808;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,102,1732	0/0:4,0:4:6.02:0,6,104	0/0:13,0:13:23.81:0,24,348	0/0:15,0:14:13.16:0,13,276	0/0:16,0:16:45.15:0,45,778	0/0:10,0:10:27.09:0,27,458	0/0:10,0:9:21.03:0,21,278	0/0:30,0:30:72.21:0,72,1152	1/1:4,17:21:48.16:1216,48,0	0/0:19,0:18:48.16:0,48,809	0/0:7,0:7:18.06:0,18,313	0/0:16,0:16:39.09:0,39,585	0/0:14,0:14:33.10:0,33,532	0/0:20,0:20:51.17:0,51,882	0/0:21,0:21:57.20:0,57,991	0/1:17,1:18:22.04:22,0,801	0/0:31,0:31:66.23:0,66,1139	1/1:9,16:25:56.86:1307,57,0	0/0:28,0:28:78.24:0,78,1235	0/0:21,0:21:57.17:0,57,926	0/0:13,0:13:36.09:0,36,570	0/0:7,0:7:18.06:0,18,313	0/0:10,0:10:27.09:0,27,464	0/0:10,0:10:27.09:0,27,463	0/0:14,0:14:30.10:0,30,519	0/0:28,0:28:66.17:0,66,1104	0/0:31,0:31:87.25:0,87,1437	0/0:6,0:6:18.06:0,18,313
chr10	68290146	.	GT	G	727.99	PASS	AC=2;AF=0.038;AN=52;BaseQRankSum=6.968;DP=527;FS=1.755;HRun=2;HaplotypeScore=54.6745;InbreedingCoeff=0.9960;MQ=54.82;MQ0=15;MQRankSum=-0.917;QD=28.00;ReadPosRankSum=1.242;VQSLOD=3.2702;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:80.69:0,81,1138	0/0:11,0:11:33.11:0,33,494	./.	./.	0/0:23,0:23:60.19:0,60,876	0/0:15,0:15:45.14:0,45,654	0/0:22,0:21:45.10:0,45,643	0/0:30,0:27:81.27:0,81,1194	0/0:22,0:22:57.14:0,57,810	0/0:22,0:20:60.20:0,60,899	0/0:11,0:11:30.10:0,30,449	0/0:19,0:19:57.19:0,57,854	0/0:16,0:16:48.16:0,48,717	0/0:18,0:18:54.18:0,54,809	0/0:15,0:15:45.14:0,45,656	0/0:17,0:17:48.16:0,48,719	0/0:30,0:30:90.30:0,90,1341	1/1:3,23:26:30.71:822,31,0	0/0:16,0:15:45.07:0,45,617	0/0:29,0:29:87.29:0,87,1285	0/0:22,0:22:63.20:0,63,922	0/0:13,0:12:36.12:0,36,538	0/0:14,0:14:42.12:0,42,607	0/0:17,0:17:51.16:0,51,744	0/0:10,0:10:30.10:0,30,450	0/0:24,0:24:72.24:0,72,1056	0/0:28,0:28:84.23:0,84,1208	0/0:8,0:8:24.08:0,24,360
chr10	68291384	.	ACTT	A	475.39	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=2.584;DP=512;FS=2.088;HRun=0;HaplotypeScore=77.8489;InbreedingCoeff=0.5973;MQ=69.79;MQ0=2;MQRankSum=0.293;QD=15.85;ReadPosRankSum=1.215;VQSLOD=3.0809;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,123,1963	0/0:3,0:3:9.03:0,9,182	0/0:19,0:12:9.79:0,10,250	0/0:13,0:13:23.17:0,23,223	0/0:20,0:20:51.09:0,51,775	0/0:14,0:14:36.04:0,36,558	0/0:9,0:9:23.99:0,24,378	0/0:36,0:36:92.81:0,93,1451	0/1:12,0:12:59.91:60,0,64	0/0:24,0:23:60.14:0,60,915	0/0:18,0:17:51.04:0,51,767	0/0:17,0:16:44.68:0,45,675	0/0:11,0:11:30.08:0,30,497	0/0:14,0:14:42.05:0,42,643	0/0:23,0:23:57.02:0,57,920	0/0:15,0:15:38.50:0,39,505	0/0:25,0:25:71.55:0,72,1049	1/1:1,17:18:33.11:521,33,0	0/0:16,0:16:45.11:0,45,709	0/0:23,0:23:63.13:0,63,1015	0/0:19,0:19:54.12:0,54,867	0/0:10,0:10:27.06:0,27,447	0/0:13,0:13:27.06:0,27,442	0/0:26,0:26:60.16:0,60,1077	0/0:16,0:16:48.11:0,48,788	0/0:22,0:21:56.98:0,57,859	0/0:14,0:14:26.96:0,27,313	0/0:16,0:16:48.08:0,48,764
chr10	68291402	.	T	TTTC	1528.32	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=-2.503;DP=508;FS=1.248;HRun=0;HaplotypeScore=86.4963;InbreedingCoeff=0.6697;MQ=60.19;MQ0=3;MQRankSum=2.040;QD=20.11;ReadPosRankSum=-2.270;VQSLOD=3.1273;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:98.55:0,99,1216	0/0:5,0:5:15.02:0,15,163	0/0:14,0:3:2.87:0,3,31	0/0:8,0:8:8.57:0,9,54	0/0:22,0:22:53.97:0,54,631	0/0:14,0:14:26.86:0,27,317	0/0:9,0:9:18.52:0,19,245	0/0:26,0:26:72.12:0,72,876	0/0:15,0:15:14.23:0,14,150	1/1:4,17:26:60.85:896,61,0	1/1:5,18:26:53.80:751,54,0	0/0:15,0:14:2.91:0,3,341	0/0:13,0:13:23.72:0,24,293	0/0:15,0:15:39.03:0,39,479	0/0:20,0:20:44.45:0,44,531	0/0:19,0:19:39.01:0,39,417	0/0:21,0:21:57.09:0,57,691	0/0:17,0:17:39.10:0,39,467	0/0:18,0:17:41.65:0,42,463	0/0:26,0:26:56.76:0,57,635	0/0:14,0:14:33.08:0,33,425	0/0:19,0:18:32.95:0,33,386	0/0:11,0:11:23.18:0,23,275	0/0:24,0:24:59.79:0,60,665	0/0:17,0:17:32.60:0,33,428	0/1:23,0:22:5.63:6,0,333	0/0:12,0:12:21:0,21,214	0/0:19,0:19:54.05:0,54,631
chr10	68291466	.	T	TA	408.62	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-1.587;DP=522;FS=1.121;HRun=3;HaplotypeScore=52.8323;InbreedingCoeff=0.9573;MQ=56.51;MQ0=12;MQRankSum=0.184;QD=27.24;ReadPosRankSum=-0.471;VQSLOD=2.7166;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:87.23:0,87,1017	0/0:5,0:5:15.05:0,15,180	0/0:24,0:7:18.05:0,18,208	0/0:22,0:6:15.05:0,15,180	0/0:17,0:17:48.13:0,48,565	0/0:16,0:15:36.09:0,36,419	0/0:15,0:15:45.14:0,45,539	0/0:19,0:17:48.12:0,48,546	1/1:2,13:15:36.12:503,36,0	0/0:25,0:25:69.21:0,69,828	0/0:24,0:24:69.20:0,69,812	0/0:7,0:7:21.06:0,21,252	0/0:12,0:12:33.10:0,33,396	0/0:15,0:15:45.14:0,45,540	0/0:19,0:20:50.37:0,50,583	0/0:23,0:23:66.20:0,66,785	0/0:24,0:24:66.20:0,66,785	0/0:17,0:17:33.10:0,33,394	0/0:16,0:15:45.14:0,45,540	0/0:37,0:37:99:0,111,1332	0/0:14,0:14:42.13:0,42,503	0/0:18,0:18:54.15:0,54,637	0/0:17,0:17:51.14:0,51,600	0/0:12,0:12:36.07:0,36,416	0/0:19,0:19:57.17:0,57,683	0/0:24,0:24:69.19:0,69,807	0/0:16,0:16:48.15:0,48,576	0/0:19,0:19:51.16:0,51,612
chr10	68291558	.	CATCCATCCATCCATCT	C	493	PASS	AB=1.000;AC=3;AF=0.058;AN=52;BaseQRankSum=3.419;DP=583;FS=1.047;HRun=0;HaplotypeScore=290.2050;InbreedingCoeff=0.5562;MQ=44.69;MQ0=39;MQRankSum=0.533;QD=10.72;ReadPosRankSum=2.726;VQSLOD=2.2498;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:23:23.45:23,0,1070	0/0:7,0:7:15.05:0,15,286	./.	./.	0/0:36,0:34:48.93:0,49,1075	0/0:26,0:24:66.13:0,66,1174	0/0:13,0:9:21.05:0,21,272	0/0:27,0:21:50.24:0,50,400	0/0:23,0:23:43.63:0,44,903	1/1:2,17:18:34.58:574,35,0	0/0:2,24:26:2.29:0,2,22	0/0:18,0:17:42.61:0,43,1176	0/0:31,0:29:69.84:0,70,1721	0/0:24,0:23:47.84:0,48,1027	0/0:25,0:24:52.07:0,52,1242	0/0:26,0:26:63.69:0,64,1651	0/0:14,0:9:24.03:0,24,443	0/0:14,0:11:30.05:0,30,859	0/0:27,0:25:62.92:0,63,1516	0/0:21,0:21:36.97:0,37,664	0/0:10,0:8:20.06:0,20,341	0/0:13,0:13:27.07:0,27,701	0/0:20,0:18:42.63:0,43,1094	0/0:22,0:17:45.13:0,45,1258	0/0:35,0:35:83.44:0,83,1978	0/0:36,0:34:99:0,99,2227	0/0:27,0:26:69.18:0,69,1772	0/0:16,0:14:39.13:0,39,804
chr10	68295722	.	AGAAATAAAT	A	85.55	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.303;DP=479;FS=2.561;HRun=0;HaplotypeScore=124.2338;InbreedingCoeff=0.7595;MQ=69.09;MQ0=1;MQRankSum=-2.321;QD=12.22;ReadPosRankSum=1.181;VQSLOD=2.7047;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:63.22:0,63,2713	0/0:6,0:6:15.05:0,15,702	0/0:14,0:11:20.97:0,21,639	0/0:11,0:10:21.07:0,21,633	0/0:27,0:27:75.24:0,75,3319	0/0:15,0:15:36.12:0,36,1643	0/0:19,0:19:42.14:0,42,1534	0/0:23,0:23:60.21:0,60,2392	0/0:14,0:14:42.14:0,42,1649	0/0:22,0:22:45.15:0,45,1983	0/0:12,0:12:33.11:0,33,1365	0/0:17,0:17:48.16:0,48,2147	0/0:10,0:10:27.09:0,27,1120	0/0:15,0:15:45.15:0,45,2048	0/0:16,0:16:33.11:0,33,1562	0/0:13,0:13:36.11:0,36,1515	0/0:25,0:24:69.19:0,69,2796	1/1:2,5:7:5.87:166,6,0	0/0:14,0:14:42.11:0,42,1502	0/0:33,0:33:87.27:0,87,3376	0/0:11,0:11:33.10:0,33,1223	0/0:5,0:5:9.03:0,9,360	0/0:16,0:16:45.15:0,45,1792	0/0:13,0:13:30.10:0,30,1322	0/0:24,0:24:69.24:0,69,2638	0/0:31,0:31:81.28:0,81,3728	0/0:32,0:32:84.29:0,84,3788	0/0:5,0:5:9.03:0,9,355
chr10	68295909	.	C	CT	53.76	PASS	AB=0.842;AC=3;AF=0.054;AN=56;BaseQRankSum=5.618;DP=494;FS=1.210;HRun=0;HaplotypeScore=74.6795;InbreedingCoeff=0.4995;MQ=68.58;MQ0=33;MQRankSum=-2.773;QD=2.24;ReadPosRankSum=0.596;VQSLOD=2.4770;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:39:93.96:0,94,1073	0/0:10,0:10:23.85:0,24,264	0/0:40,0:16:36.68:0,37,259	0/0:39,0:8:3.64:0,4,152	0/0:19,0:19:51.08:0,51,597	0/0:15,0:14:35.95:0,36,396	0/0:16,0:13:32.09:0,32,365	0/0:18,0:16:38.74:0,39,374	0/0:10,0:10:21.48:0,21,96	1/1:4,3:7:10:86,10,0	0/1:13,3:11:18.39:66,0,18	0/0:15,0:15:41.07:0,41,475	0/0:11,0:11:32.68:0,33,405	0/0:14,0:12:27.01:0,27,306	0/0:9,0:9:23.97:0,24,257	0/0:10,0:8:23.81:0,24,239	0/0:35,0:34:99:0,99,1151	0/0:11,0:9:7.89:0,8,69	0/0:16,0:13:38.98:0,39,439	0/0:13,0:12:32.97:0,33,337	0/0:14,0:10:15.03:0,15,176	0/0:15,0:15:38.86:0,39,382	0/0:15,0:15:35.80:0,36,384	0/0:11,0:11:30.02:0,30,341	0/0:26,0:24:67.42:0,67,688	0/0:20,0:19:57.03:0,57,603	0/0:21,0:21:60.08:0,60,703	0/0:6,0:4:12:0,12,128
chr10	68298481	.	C	CA	1806.40	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-8.003;DP=566;FS=1.986;HRun=1;HaplotypeScore=52.2846;InbreedingCoeff=0.9985;MQ=86.80;MQ0=1;MQRankSum=-3.286;QD=41.05;ReadPosRankSum=1.792;VQSLOD=4.2090;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:60.19:0,60,779	0/0:12,0:12:36.12:0,36,467	0/0:26,0:26:68.66:0,69,933	0/0:20,0:20:60.19:0,60,758	0/0:29,0:29:87.28:0,87,1129	0/0:28,0:28:81.22:0,81,1008	0/0:18,0:18:54.18:0,54,700	0/0:33,0:33:96.31:0,96,1247	0/0:19,0:19:51.17:0,51,662	1/1:1,20:21:63.21:939,63,0	1/1:1,22:23:66.22:989,66,0	0/0:18,0:18:51.17:0,51,661	0/0:13,0:13:39.09:0,39,487	0/0:17,0:17:48.16:0,48,623	0/0:18,0:18:54.18:0,54,701	0/0:12,0:12:30.10:0,30,389	0/0:24,0:24:72.23:0,72,935	0/0:9,0:9:24.08:0,24,312	0/0:21,0:21:57.18:0,57,726	0/0:27,0:27:75.24:0,75,973	0/0:17,0:17:51.17:0,51,662	0/0:17,0:17:48.16:0,48,623	0/0:18,0:18:54.16:0,54,684	0/0:12,0:12:36.12:0,36,467	0/0:20,0:20:60.18:0,60,766	0/0:32,1:32:48.31:0,48,1111	0/0:26,0:26:78.24:0,78,996	0/0:13,0:13:39.13:0,39,506
chr10	68301099	.	GTTGT	G	10887.98	PASS	AB=0.769;AC=39;AF=0.722;AN=54;BaseQRankSum=13.493;DP=715;FS=1.412;HRun=0;HaplotypeScore=112.5405;InbreedingCoeff=0.8554;MQ=59.57;MQ0=9;MQRankSum=-0.184;QD=21.06;ReadPosRankSum=-0.108;VQSLOD=4.7293;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:75.26:0,75,1720	1/1:3,8:11:15.01:212,15,0	0/0:28,0:18:9.03:0,9,152	./.	0/0:31,0:32:60.19:0,60,1255	1/1:6,19:24:39.13:625,39,0	1/1:5,10:15:12.04:192,12,0	1/1:27,0:27:21.05:239,21,0	1/1:8,19:27:36.12:576,36,0	1/1:16,22:39:63.16:861,63,0	1/1:9,11:20:30.02:424,30,0	1/1:9,15:23:30.10:480,30,0	0/0:23,0:23:48.15:0,48,1045	1/1:8,15:23:27.09:432,27,0	1/1:10,15:24:36.12:576,36,0	1/1:7,22:29:54.18:864,54,0	1/1:14,21:34:48.13:741,48,0	1/1:9,12:20:21.07:318,21,0	0/1:14,6:19:11.99:251,0,12	1/1:10,12:22:36.09:527,36,0	1/1:14,18:32:39.13:624,39,0	1/1:10,19:30:54.09:759,54,0	0/0:29,0:29:60.18:0,60,1282	0/0:31,0:31:63.20:0,63,1425	1/1:9,20:29:48.01:768,48,0	1/1:13,17:30:48.14:723,48,0	1/1:10,23:33:45.12:693,45,0	0/0:3,0:3:0:0,0,0
chr10	68303717	.	TTTTTTTG	T	845.52	PASS	AB=1.000;AC=9;AF=0.167;AN=54;BaseQRankSum=4.182;DP=463;FS=0.796;HRun=0;HaplotypeScore=127.2438;InbreedingCoeff=0.7385;MQ=61.19;MQ0=0;MQRankSum=-0.203;QD=9.19;ReadPosRankSum=-1.979;VQSLOD=2.1029;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:47.42:0,47,1517	0/0:7,0:7:15.02:0,15,290	./.	0/0:14,0:11:2.88:0,3,24	0/0:25,0:25:51.14:0,51,1550	0/0:22,0:22:30.08:0,30,693	0/0:16,0:16:20.99:0,21,436	1/1:33,0:32:32.82:271,33,0	1/1:4,6:10:6.02:133,6,0	1/1:19,0:19:35.33:533,35,0	1/1:19,0:19:3.01:49,3,0	0/0:17,0:17:24.05:0,24,544	0/0:8,0:8:8.95:0,9,83	0/0:12,0:12:12.04:0,12,313	0/0:17,0:17:21.05:0,21,529	0/0:17,0:17:18.04:0,18,543	0/0:11,0:11:6.02:0,6,153	0/1:11,0:11:0:0,0,0	0/0:13,0:13:24.08:0,24,734	0/0:26,0:26:44.89:0,45,1008	0/0:7,0:7:6:0,6,67	0/0:13,0:13:21.07:0,21,557	0/0:14,0:14:21.07:0,21,733	0/0:19,0:19:48.12:0,48,1364	0/0:23,0:23:21.04:0,21,481	0/0:15,0:15:24.08:0,24,674	0/0:25,0:25:42.04:0,42,960	0/0:10,0:10:6.02:0,6,181
chr10	68303738	.	GTTTTTTGTTTTTTGT	G	1771.76	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=1.497;DP=444;FS=4.499;HRun=0;HaplotypeScore=173.8909;InbreedingCoeff=0.6035;MQ=54.67;MQ0=4;MQRankSum=1.640;QD=28.58;ReadPosRankSum=-2.538;VQSLOD=2.2354;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:82.07:0,82,4115	0/0:6,0:6:15.05:0,15,710	0/0:7,0:4:6.48:0,6,69	0/0:13,0:7:4.34:0,4,162	0/0:22,0:22:60.19:0,60,3465	0/0:26,0:26:36.09:0,36,1706	0/0:18,0:18:21.06:0,21,1058	0/1:25,0:24:10.49:10,0,987	0/0:8,0:8:15.02:0,15,242	1/1:1,18:19:48.09:1596,48,0	1/1:3,15:18:23.81:292,24,0	0/0:17,0:17:24.08:0,24,1347	0/0:8,0:8:17.92:0,18,748	0/0:11,0:11:20.96:0,21,781	0/0:17,0:17:27.09:0,27,1331	0/0:14,0:14:24.08:0,24,1294	0/0:16,0:16:6.02:0,6,357	0/0:11,0:11:27.08:0,27,466	0/0:15,0:12:24.40:0,24,1631	0/0:24,0:24:51.11:0,51,2507	0/0:11,0:11:15.04:0,15,382	0/0:12,0:12:30.07:0,30,1393	0/0:12,0:12:33.09:0,33,1812	0/0:22,0:22:60.20:0,60,3140	0/0:14,0:14:30.07:0,30,1156	0/0:17,0:17:2.70:0,3,1775	0/0:22,0:22:42.13:0,42,2182	0/0:9,0:9:9.02:0,9,445
chr10	68303745	.	GTTTTTTGT	G	1362.20	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=2.917;DP=428;FS=0.000;HRun=0;HaplotypeScore=121.3496;InbreedingCoeff=0.7316;MQ=61.48;MQ0=4;MQRankSum=3.869;QD=17.03;ReadPosRankSum=-4.287;VQSLOD=1.4012;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:78.24:0,78,2320	0/0:5,0:5:15.02:0,15,283	0/0:10,0:6:9.46:0,9,82	0/1:13,0:7:15.01:15,0,47	0/0:21,0:21:63.18:0,63,2004	0/0:24,0:24:30.08:0,30,756	0/0:18,0:18:21.07:0,21,452	1/1:5,22:26:56.77:531,57,0	1/1:7,0:7:6.02:67,6,0	1/1:18,0:18:42.07:741,42,0	1/1:15,0:15:14.95:164,15,0	0/0:17,0:17:24.08:0,24,611	0/0:10,0:10:26.97:0,27,360	0/0:9,0:9:14.98:0,15,369	0/0:18,0:18:20.70:0,21,585	0/0:14,0:14:18.05:0,18,595	0/0:15,0:15:8.98:0,9,194	0/0:10,0:10:14.62:0,15,140	0/0:14,0:11:22.66:0,23,814	0/0:24,0:24:30.68:0,31,1080	0/0:10,0:10:6.02:0,6,95	0/0:11,0:11:15.34:0,15,634	0/0:12,0:12:30.10:0,30,1003	0/0:22,0:22:62.75:0,63,1813	0/0:13,0:13:20.83:0,21,467	0/0:19,0:19:7.25:0,7,790	0/0:17,0:17:42.02:0,42,998	0/0:5,0:5:6.02:0,6,198
chr10	68303753	.	T	TTTTTTG	9008.50	PASS	AB=0.883;AC=36;AF=0.643;AN=56;BaseQRankSum=-7.047;DP=434;FS=3.577;HRun=0;HaplotypeScore=90.2732;InbreedingCoeff=0.5921;MQ=65.52;MQ0=4;MQRankSum=-2.926;QD=28.69;ReadPosRankSum=-0.174;VQSLOD=4.2190;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:78.09:0,78,1139	1/1:0,5:5:11.84:395,12,0	0/0:11,0:7:14.97:0,15,124	0/1:12,0:6:15.24:15,0,25	0/0:19,0:19:54.17:0,54,1022	1/1:3,19:22:0.67:669,1,0	1/1:3,16:19:18.05:468,18,0	1/1:22,0:21:29.97:260,30,0	0/0:9,0:9:9.83:0,10,122	0/1:18,0:18:40.34:40,0,260	0/1:15,0:15:20.81:88,0,21	1/1:2,15:18:18.06:592,18,0	0/0:10,0:10:18.05:0,18,199	1/1:1,8:9:9.03:295,9,0	1/1:2,17:19:14.78:494,15,0	1/1:0,13:13:18.06:594,18,0	0/1:2,15:17:9.84:93,0,10	0/0:8,0:8:15.02:0,15,165	1/1:4,14:17:48.06:881,48,0	1/1:4,20:24:28.97:1096,29,0	1/1:3,9:14:3:37,3,0	1/1:2,9:11:21.03:492,21,0	0/0:12,0:12:36.08:0,36,512	0/0:22,0:22:54.14:0,54,863	1/1:0,9:11:18.06:587,18,0	1/1:1,18:21:53.53:796,54,0	1/1:3,15:19:12.58:919,13,0	1/1:0,5:5:6.02:198,6,0
chr10	68304094	.	C	CT	895.03	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.547;DP=558;FS=5.246;HRun=3;HaplotypeScore=54.0369;InbreedingCoeff=0.9838;MQ=69.32;MQ0=0;MQRankSum=-0.002;QD=35.80;ReadPosRankSum=-4.108;VQSLOD=2.3244;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:84.25:0,84,996	0/0:5,0:5:15.05:0,15,180	0/0:14,0:14:39.12:0,39,468	0/0:16,0:16:45.07:0,45,511	0/0:19,0:19:51.16:0,51,611	0/0:31,0:31:93.29:0,93,1116	0/0:21,0:21:60.16:0,60,700	1/1:0,25:25:72.23:990,72,0	0/0:23,0:23:60.16:0,60,698	0/0:30,0:30:84.26:0,84,1008	0/0:15,0:15:36.11:0,36,432	0/0:24,0:24:69.21:0,69,828	0/0:18,0:18:54.17:0,54,647	0/0:13,0:13:39.12:0,39,467	0/0:17,0:17:45.13:0,45,529	0/0:13,0:13:36.10:0,36,421	0/0:19,0:19:57.16:0,57,672	0/0:15,0:15:39.12:0,39,468	0/0:15,0:15:45.11:0,45,510	0/0:24,0:24:72.22:0,72,862	0/0:23,0:23:63.18:0,63,744	0/0:15,0:15:45.13:0,45,528	0/0:19,0:19:57.13:0,57,649	0/0:24,0:24:69.21:0,69,828	0/0:15,0:15:39.10:0,39,453	0/0:43,0:43:99:0,126,1483	0/0:22,0:22:63.18:0,63,744	0/0:12,0:12:36.11:0,36,432
chr10	68305016	.	A	ATT	867.05	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-1.815;DP=370;FS=8.942;HRun=9;HaplotypeScore=42.5625;InbreedingCoeff=0.8402;MQ=68.59;MQ0=1;MQRankSum=1.204;QD=23.43;ReadPosRankSum=-3.420;VQSLOD=1.0008;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:7:18:0,18,182	0/0:10,0:10:24.03:0,24,248	0/0:8,0:8:15.49:0,15,153	0/0:3,0:3:5.60:0,6,42	0/0:29,0:29:66.08:0,66,702	0/0:18,0:18:45.07:0,45,479	0/0:10,0:10:30.08:0,30,319	1/1:6,19:26:60.18:894,60,0	1/1:0,0:11:27.32:94,27,0	0/0:10,0:10:24.06:0,24,255	0/0:18,0:18:54.14:0,54,575	0/0:18,0:18:48.07:0,48,492	0/0:8,0:8:18.02:0,18,183	0/0:7,0:7:18.04:0,18,192	0/0:18,0:18:54.12:0,54,567	0/0:11,0:11:33.08:0,33,351	0/0:16,0:16:38.99:0,39,391	0/0:14,0:14:36.02:0,36,370	0/0:13,0:13:39.09:0,39,408	0/0:17,0:17:45.09:0,45,479	0/0:10,0:10:27.07:0,27,287	0/0:7,0:7:15:0,15,160	0/0:17,0:17:45.09:0,45,478	0/0:2,0:2:2.99:0,3,32	0/0:9,0:9:27.07:0,27,287	0/0:18,0:18:45.09:0,45,473	0/0:27,0:27:75.15:0,75,790	0/0:7,0:7:18.05:0,18,192
chr10	68305636	.	AC	A	10063.83	PASS	AB=0.825;AC=42;AF=0.750;AN=56;BaseQRankSum=5.060;DP=572;FS=0.000;HRun=8;HaplotypeScore=61.7749;InbreedingCoeff=0.8247;MQ=59.31;MQ0=4;MQRankSum=0.365;QD=22.31;ReadPosRankSum=0.696;VQSLOD=5.0504;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:78.19:0,78,915	1/1:1,5:6:15.02:145,15,0	0/1:14,0:8:3:3,0,102	0/0:16,0:10:17.93:0,18,162	0/0:15,0:14:33.10:0,33,398	1/1:2,13:15:36.05:348,36,0	1/1:7,26:33:66.10:637,66,0	0/1:12,14:22:6.67:306,0,7	1/1:1,14:14:30.05:290,30,0	1/1:3,17:20:53.12:498,53,0	1/1:1,9:10:21.03:203,21,0	1/1:3,21:24:63.10:608,63,0	0/0:22,0:22:57.17:0,57,678	1/1:4,20:24:45.06:434,45,0	1/1:1,25:26:75.12:724,75,0	1/1:4,17:21:54.05:514,54,0	1/1:5,33:38:96.15:927,96,0	1/1:2,24:27:71.15:672,71,0	1/1:5,12:16:36.05:347,36,0	1/1:2,14:16:39.06:377,39,0	1/1:4,47:50:99:1331,138,0	1/1:2,7:9:21.03:203,21,0	0/0:3,0:3:9.03:0,9,109	0/0:33,0:33:90.27:0,90,1087	1/1:0,17:17:45.07:434,45,0	1/1:1,15:16:45.05:427,45,0	1/1:1,22:23:60.10:579,60,0	1/1:1,2:3:6.01:58,6,0
chr10	68306501	.	CGTGTGTGTGTGTGTGT	C	1463.18	PASS	AB=0.840;AC=5;AF=0.093;AN=54;BaseQRankSum=4.462;DP=615;FS=3.062;HRun=0;HaplotypeScore=249.5541;InbreedingCoeff=0.6062;MQ=64.11;MQ0=11;MQRankSum=-3.671;QD=22.51;ReadPosRankSum=0.077;VQSLOD=2.5334;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:29:27.09:0,27,1490	0/0:6,0:6:12.04:0,12,752	1/1:25,0:17:2.51:7,3,0	0/0:22,0:16:0:0,0,0	0/0:24,0:24:38.75:0,39,1698	0/0:13,0:11:9.03:0,9,439	0/0:26,0:25:21.51:0,22,809	0/0:29,0:28:13.10:0,13,109	0/0:27,0:27:24.08:0,24,1236	0/1:17,4:21:15.06:622,0,15	1/1:11,7:19:33.01:944,33,0	0/0:24,0:22:29.36:0,29,1423	0/0:14,0:16:21.05:0,21,863	0/0:31,0:29:30.12:0,30,1126	0/0:29,0:27:35.83:0,36,1410	0/0:22,0:22:29.89:0,30,1592	0/0:21,0:20:21.96:0,22,1163	0/0:13,0:16:36.12:0,36,1595	0/0:20,0:17:21.53:0,22,905	0/0:10,0:10:0.47:0,0,0	0/0:56,0:55:44.84:0,45,1534	0/0:11,0:11:18.06:0,18,987	0/0:20,0:20:30.09:0,30,1400	0/0:37,0:37:63.69:0,64,3272	./.	0/0:25,0:24:59.35:0,59,2310	0/0:14,0:13:24.08:0,24,1345	0/0:7,0:5:9.01:0,9,403
chr10	68306572	.	GT	G	1124.47	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=2.747;DP=584;FS=5.302;HRun=3;HaplotypeScore=87.0142;InbreedingCoeff=0.9747;MQ=57.41;MQ0=31;MQRankSum=1.948;QD=26.77;ReadPosRankSum=1.822;VQSLOD=2.7042;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:38:99:0,105,1437	0/0:6,0:5:15.05:0,15,216	0/0:37,0:18:26.77:0,27,440	0/0:36,0:20:44.08:0,44,550	0/0:17,0:16:48.16:0,48,686	0/0:15,0:12:36.12:0,36,518	0/0:27,0:27:69.07:0,69,836	0/0:28,0:27:81.26:0,81,1145	0/0:14,0:13:36.12:0,36,518	1/1:2,23:25:66.19:803,66,0	1/1:2,15:16:36.11:443,36,0	0/0:20,0:20:60.07:0,60,800	0/0:23,0:22:57.17:0,57,801	0/0:17,0:15:45.13:0,45,615	0/0:26,0:24:66.20:0,66,915	0/0:19,0:18:48.15:0,48,672	0/0:18,0:18:45.07:0,45,579	0/0:27,0:27:75.16:0,75,1019	0/0:26,0:23:69.20:0,69,940	0/0:14,0:13:33.11:0,33,475	0/0:22,0:18:48.16:0,48,690	0/0:11,0:11:33.11:0,33,474	0/0:14,0:13:39.13:0,39,560	0/0:33,0:29:78.23:0,78,1082	0/0:13,0:13:27.09:0,27,387	0/0:13,0:10:30.09:0,30,410	0/0:22,0:20:60.20:0,60,862	0/0:4,0:4:12.04:0,12,173
chr10	68306995	.	CTGTGTGTGTGTGTGTGTGTGTG	C	18709.68	PASS	AB=0.660;AC=30;AF=0.536;AN=56;BaseQRankSum=11.532;DP=558;FS=7.498;HRun=0;HaplotypeScore=312.7158;InbreedingCoeff=0.7789;MQ=64.76;MQ0=5;MQRankSum=-8.662;QD=66.82;ReadPosRankSum=5.000;VQSLOD=3.1086;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:37:75.23:0,75,5489	1/1:2,2:4:6.02:352,6,0	0/0:20,0:14:12.04:0,12,313	0/0:25,0:19:5.78:0,6,552	0/0:22,0:23:48.16:0,48,4028	1/1:9,18:27:51.17:2989,51,0	1/1:7,12:19:12.04:703,12,0	0/0:44,0:44:81.11:0,81,5324	0/0:8,0:21:48.16:0,48,2105	0/0:8,0:15:33.11:0,33,2878	0/0:7,0:10:20.99:0,21,1567	1/1:9,9:19:24.08:1384,24,0	0/0:19,0:20:36.12:0,36,2745	1/1:11,4:15:15.05:760,15,0	1/1:13,12:25:27.09:1582,27,0	0/1:8,9:17:99:1034,0,157	1/1:15,7:23:12.04:681,12,0	0/0:11,0:11:18.53:0,19,1345	1/1:11,10:20:30.10:1370,30,0	1/1:4,4:9:15.05:755,15,0	1/1:10,7:17:3.01:176,3,0	1/1:7,8:15:21.07:1109,21,0	0/0:12,0:12:27.09:0,27,2438	0/0:37,0:40:75.26:0,75,6479	1/1:5,10:16:27.09:1520,27,0	0/1:17,17:34:99:2362,0,164	1/1:4,7:11:21.07:1231,21,0	1/1:2,6:8:12.04:703,12,0
chr10	68307260	.	G	GAT	3105.17	PASS	AB=0.690;AC=30;AF=0.556;AN=54;BaseQRankSum=-8.439;DP=285;FS=1.894;HRun=0;HaplotypeScore=49.6160;InbreedingCoeff=0.1750;MQ=82.33;MQ0=1;MQRankSum=1.697;QD=16.69;ReadPosRankSum=1.360;VQSLOD=3.1549;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:26.91:0,27,303	0/1:4,3:7:21.13:170,0,21	1/1:8,0:8:0.15:1,0,0	0/1:14,0:9:0.02:0,0,28	0/0:23,0:23:12.08:0,12,608	0/1:5,8:13:48.26:265,0,48	1/1:3,2:5:6.02:96,6,0	0/0:26,0:26:42.57:0,43,202	0/0:12,0:12:25.57:0,26,126	1/1:2,0:5:8.98:75,9,0	1/1:4,0:4:5.92:51,6,0	1/1:2,5:7:11.93:192,12,0	0/0:8,0:8:15.05:0,15,181	1/1:5,2:7:3.01:48,3,0	1/1:2,6:8:18.06:274,18,0	0/1:3,2:5:30.08:42,0,30	0/1:8,7:17:92.17:237,0,92	0/0:9,0:9:22.73:0,23,112	1/1:2,11:13:33.06:475,33,0	1/1:3,2:5:2.94:18,3,0	./.	1/1:4,0:4:3.01:48,3,0	0/1:8,3:12:30.43:30,0,117	0/0:6,0:6:5.98:0,6,56	0/1:5,7:12:48.28:265,0,48	0/1:5,9:16:0.19:414,0,0	0/1:3,13:16:9.09:358,0,9	0/1:3,5:8:84.45:216,0,84
chr10	68307272	.	TATA	T	1477.80	PASS	AB=1.000;AC=7;AF=0.130;AN=54;BaseQRankSum=3.240;DP=286;FS=1.368;HRun=0;HaplotypeScore=58.9526;InbreedingCoeff=0.7464;MQ=78.38;MQ0=2;MQRankSum=-2.873;QD=26.39;ReadPosRankSum=0.832;VQSLOD=3.2488;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:35.79:0,36,736	0/0:6,0:6:18.04:0,18,311	0/1:6,0:6:6.07:6,0,148	0/0:14,0:9:20.59:0,21,277	0/0:23,0:23:69.23:0,69,1561	0/0:15,0:15:39.13:0,39,731	0/0:2,0:2:6.02:0,6,104	1/1:1,30:30:72.20:1069,72,0	1/1:0,10:10:27.09:476,27,0	0/0:6,0:6:18.06:0,18,365	0/0:4,0:4:8.93:0,9,205	0/0:7,0:7:18.06:0,18,293	0/0:7,0:7:21.07:0,21,455	0/0:3,0:3:6.02:0,6,122	0/0:9,0:9:24.08:0,24,409	0/0:6,0:6:15.05:0,15,234	0/0:15,0:15:35.79:0,36,639	1/1:9,0:9:17.92:70,18,0	0/0:14,0:14:42.14:0,42,726	0/0:10,0:10:24.06:0,24,344	./.	0/0:5,0:5:9.03:0,9,127	0/0:12,0:12:33.18:0,33,528	0/0:3,0:3:9.03:0,9,191	0/0:11,0:11:30.10:0,30,534	0/0:16,0:16:48.16:0,48,860	0/0:18,0:18:39.13:0,39,648	0/0:10,0:10:27.05:0,27,500
chr10	68307274	.	TATA	T	1853.08	PASS	AC=6;AF=0.111;AN=54;BaseQRankSum=1.976;DP=286;FS=3.990;HRun=0;HaplotypeScore=56.6490;InbreedingCoeff=0.8393;MQ=78.36;MQ0=2;MQRankSum=-4.323;QD=37.06;ReadPosRankSum=0.532;VQSLOD=3.8398;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:35.33:0,35,705	0/0:5,0:5:15.05:0,15,276	0/0:7,0:7:7.56:0,8,163	0/0:13,0:8:17.41:0,17,211	0/0:23,0:23:69.23:0,69,1492	0/0:15,0:15:39.13:0,39,681	0/0:2,0:2:6.02:0,6,99	1/1:30,0:30:72.19:1070,72,0	1/1:10,0:10:27.09:476,27,0	0/0:5,0:5:15.05:0,15,242	0/0:4,0:4:8.93:0,9,174	0/0:7,0:7:18.06:0,18,277	0/0:7,0:7:21.07:0,21,437	0/0:3,0:3:6.02:0,6,118	0/0:9,0:9:24.08:0,24,389	0/0:7,0:7:18.05:0,18,246	0/0:15,0:15:38.62:0,39,646	1/1:0,9:9:24.08:447,24,0	0/0:14,0:14:42.14:0,42,683	0/0:9,0:9:21.06:0,21,277	./.	0/0:5,0:5:9.02:0,9,112	0/0:12,0:12:23.45:0,23,451	0/0:4,0:4:12:0,12,171	0/0:12,0:12:33.10:0,33,536	0/0:15,0:15:45.15:0,45,790	0/0:18,0:18:39.13:0,39,611	0/0:10,0:10:30.10:0,30,527
chr10	68308279	.	GTTTA	G	1343.01	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=8.477;DP=442;FS=13.850;HRun=0;HaplotypeScore=72.7644;InbreedingCoeff=0.5103;MQ=63.83;MQ0=5;MQRankSum=-0.268;QD=23.98;ReadPosRankSum=-3.953;VQSLOD=1.3227;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,117,2170	0/0:7,0:7:21.06:0,21,510	0/0:20,0:13:33.08:0,33,554	0/0:13,0:11:30.05:0,30,480	0/0:15,0:15:42.07:0,42,836	0/0:11,0:11:33:0,33,603	0/0:18,0:18:51.07:0,51,921	1/1:3,36:39:99:1257,102,0	0/0:6,0:6:15.05:0,15,399	0/0:10,0:10:30.09:0,30,570	0/0:10,0:10:2.14:0,2,343	0/0:15,0:15:42.08:0,42,904	0/0:9,0:9:24.04:0,24,478	0/0:8,0:8:21.05:0,21,467	0/0:11,0:11:33.05:0,33,627	0/0:9,0:9:24.04:0,24,471	0/0:27,0:27:81.09:0,81,1734	0/1:17,0:17:70.89:192,0,71	0/0:13,0:12:36.04:0,36,626	0/0:15,0:15:42.09:0,42,850	0/0:27,0:27:78.16:0,78,1690	0/0:15,0:15:45.08:0,45,946	0/0:10,0:10:27.05:0,27,559	0/0:21,0:21:60.15:0,60,1357	0/0:15,0:15:39.08:0,39,766	0/0:18,0:18:54.12:0,54,1169	0/0:22,0:22:66.11:0,66,1447	0/0:2,0:2:4.83:0,5,86
chr10	68308283	.	A	ATTTG	913.20	PASS	AB=1.000;AC=6;AF=0.107;AN=56;BaseQRankSum=-0.607;DP=433;FS=1.961;HRun=0;HaplotypeScore=74.3800;InbreedingCoeff=0.5259;MQ=60.41;MQ0=6;MQRankSum=-2.678;QD=12.34;ReadPosRankSum=-2.368;VQSLOD=2.5941;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:69.19:0,69,1067	0/0:7,0:7:18.06:0,18,294	0/0:19,0:10:12.02:0,12,142	0/0:13,0:10:6.01:0,6,74	0/0:14,0:14:24.08:0,24,370	0/0:13,0:13:27.03:0,27,364	0/0:19,0:19:30.05:0,30,415	0/1:38,0:38:99:143,0,132	0/0:5,0:5:15.05:0,15,245	1/1:4,7:11:24.08:554,24,0	1/1:5,5:10:15.05:326,15,0	0/0:14,0:14:30.09:0,30,464	0/0:7,0:7:15.05:0,15,245	0/0:7,0:7:18.06:0,18,290	0/0:12,0:12:21.06:0,21,307	0/0:8,0:8:15.05:0,15,245	0/0:26,0:26:57.17:0,57,899	0/1:5,0:15:24.38:24,0,162	0/0:13,0:12:15.04:0,15,223	0/0:15,0:15:30.09:0,30,462	0/0:25,0:25:57.19:0,57,923	0/0:15,0:15:30.09:0,30,464	0/0:9,0:9:18.06:0,18,294	0/0:22,0:22:45.15:0,45,726	0/0:13,0:13:24.08:0,24,389	0/0:19,0:19:39.10:0,39,608	0/0:23,0:23:51.16:0,51,797	0/0:2,0:2:3.01:0,3,49
chr10	68308409	.	CT	C	1537.54	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=-2.562;DP=248;FS=0.671;HRun=13;HaplotypeScore=42.3037;InbreedingCoeff=0.7990;MQ=75.31;MQ0=0;MQRankSum=0.076;QD=11.56;ReadPosRankSum=1.073;VQSLOD=2.9623;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:14:21.34:0,21,190	1/1:2,5:7:14.90:109,15,0	0/0:5,0:4:5.94:0,6,44	0/0:9,0:8:5.85:0,6,68	0/0:9,0:9:9.49:0,9,88	1/1:1,8:9:23.86:175,24,0	1/1:4,4:8:11.89:87,12,0	0/0:8,0:23:41.08:0,41,240	1/1:2,1:3:2.96:22,3,0	0/0:5,0:5:10.71:0,11,44	0/0:11,0:11:26.78:0,27,110	1/1:1,4:6:7.96:50,8,0	0/0:8,0:8:12.01:0,12,112	1/1:1,6:8:16.94:115,17,0	1/1:2,3:5:8.91:65,9,0	1/1:0,6:7:16.95:115,17,0	1/1:5,16:21:47.67:350,48,0	0/0:14,0:14:34.82:0,35,143	1/1:5,6:10:17.07:116,17,0	1/1:1,4:5:8.44:65,8,0	0/0:5,0:6:0:0,0,0	1/1:3,2:5:2.10:20,2,0	0/0:8,0:8:12.02:0,12,117	0/0:3,0:3:9:0,9,81	1/1:4,3:7:3.43:23,3,0	1/1:6,6:12:19.88:137,20,0	1/1:4,7:11:23.19:161,23,0	1/1:2,6:8:17.89:131,18,0
chr10	68308416	.	T	TC	920.25	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-6.513;DP=229;FS=2.879;HRun=0;HaplotypeScore=42.5275;InbreedingCoeff=0.8241;MQ=71.11;MQ0=0;MQRankSum=-0.481;QD=31.73;ReadPosRankSum=3.820;VQSLOD=3.5371;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:32.56:0,33,365	0/0:6,0:6:17.92:0,18,137	0/0:5,0:4:8.88:0,9,75	0/0:6,0:6:13.78:0,14,103	0/0:8,0:8:23.22:0,23,233	0/0:9,0:9:23.86:0,24,178	0/0:6,0:6:17.93:0,18,142	0/0:21,0:21:36.17:0,36,258	0/0:2,0:2:5.99:0,6,50	1/1:0,4:4:12.04:156,12,0	1/1:0,11:11:30.10:387,30,0	0/0:6,0:6:14.87:0,15,104	0/0:6,0:6:18.04:0,18,206	0/0:7,0:7:20.78:0,21,152	0/0:6,0:6:17.96:0,18,148	0/0:8,0:8:20.85:0,21,151	0/0:22,0:22:65.65:0,66,494	1/1:0,14:14:39.13:515,39,0	0/0:10,0:9:26.91:0,27,218	0/0:5,0:5:14.86:0,15,105	0/0:3,0:3:5.97:0,6,46	0/0:4,0:4:8.94:0,9,69	0/0:8,0:8:24.03:0,24,270	0/0:3,0:3:9.02:0,9,110	0/0:5,0:5:11.93:0,12,90	0/0:12,0:12:35.86:0,36,286	0/0:10,0:10:27.26:0,27,198	0/0:7,0:7:20.90:0,21,159
chr10	68308430	.	C	CTATTAT	3224.03	PASS	AC=30;AF=0.789;AN=38;BaseQRankSum=1.965;DP=191;FS=2.387;HRun=0;HaplotypeScore=60.9904;InbreedingCoeff=0.4930;MQ=56.96;MQ0=1;MQRankSum=-3.993;QD=26.43;ReadPosRankSum=1.378;VQSLOD=3.3576;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:11:2.68:0,3,330	1/1:2,2:4:9.03:250,9,0	./.	./.	0/0:5,0:5:0:0,0,0	1/1:6,1:7:6.02:154,6,0	1/1:4,0:4:3.01:42,3,0	0/0:25,0:24:25.85:0,26,378	./.	1/1:4,0:4:3.01:39,3,0	1/1:10,0:10:3.01:49,3,0	1/1:2,0:2:3.01:57,3,0	./.	1/1:4,0:8:11.77:73,12,0	1/1:3,0:6:8.83:55,9,0	1/1:5,1:7:12.03:293,12,0	1/1:17,7:24:36.07:881,36,0	1/1:13,0:14:11.97:232,12,0	./.	./.	./.	./.	./.	0/0:3,0:3:3.01:0,3,61	1/1:4,1:5:3.01:77,3,0	1/1:6,5:11:15.02:355,15,0	1/1:3,4:7:12.04:332,12,0	1/1:5,4:9:18.04:452,18,0
chr10	68310497	.	C	CA	499.19	PASS	AB=0.978;AC=14;AF=0.250;AN=56;BaseQRankSum=0.114;DP=476;FS=1.451;HRun=14;HaplotypeScore=76.1694;InbreedingCoeff=0.4311;MQ=54.36;MQ0=18;MQRankSum=-3.116;QD=3.10;ReadPosRankSum=-4.291;VQSLOD=-0.6716;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,1:23:10.91:0,11,188	0/1:11,1:12:2.75:3,0,111	0/1:19,0:10:14.77:15,0,22	0/0:9,0:5:5.65:0,6,28	0/0:14,0:14:16.87:0,17,114	0/0:17,0:16:10.75:0,11,63	0/0:19,0:19:15.09:0,15,175	1/1:13,11:23:21.05:266,21,0	1/1:4,5:9:11.99:104,12,0	1/1:11,2:14:12.68:82,13,0	1/1:10,1:18:26.43:151,26,0	0/1:15,0:13:5.16:5,0,90	0/1:13,0:13:1.58:2,0,62	0/0:12,0:13:13.66:0,14,82	0/0:20,0:20:4.38:0,4,111	0/0:10,0:11:9.82:0,10,50	0/0:26,3:32:27.13:0,27,173	0/0:12,0:17:19.50:0,20,68	0/0:15,0:15:18.77:0,19,108	0/1:18,0:17:32.26:32,0,43	0/0:12,0:11:11.76:0,12,77	0/0:15,0:16:10.55:0,11,138	0/0:12,0:12:14.17:0,14,95	0/0:19,1:20:25.30:0,25,158	0/0:16,1:18:22.51:0,23,140	0/1:16,1:18:3.76:4,0,98	0/0:19,0:20:27.10:0,27,152	0/0:11,0:11:13.81:0,14,83
chr10	68310584	.	TAAAGAAGAAAGG	T	3464.64	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.687;DP=552;FS=1.268;HRun=0;HaplotypeScore=187.6278;InbreedingCoeff=0.9970;MQ=64.51;MQ0=0;MQRankSum=-2.644;QD=73.72;ReadPosRankSum=-1.118;VQSLOD=3.5038;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:51.18:0,51,2898	0/0:17,0:17:51.16:0,51,2832	0/0:16,0:12:30.49:0,30,1000	0/0:11,0:10:29.37:0,29,503	0/0:27,0:27:78.24:0,78,4022	0/0:21,0:20:63.13:0,63,3199	0/0:17,0:17:48.06:0,48,1876	0/0:21,0:21:60.17:0,60,2338	0/0:16,0:16:48.16:0,48,2856	1/1:0,23:23:63.60:1682,64,0	1/1:0,24:24:59.12:1783,59,0	0/0:18,0:18:54.17:0,54,2546	0/0:16,0:16:48.13:0,48,2076	0/0:21,0:21:60.17:0,60,2940	0/0:15,0:15:45.12:0,45,2270	0/0:18,0:18:54.15:0,54,2667	0/0:32,0:32:93.26:0,93,5090	0/0:15,0:15:39.07:0,39,1504	0/0:13,0:13:36.11:0,36,1951	0/0:32,0:32:93.28:0,93,4771	0/0:12,0:12:33.11:0,33,1876	0/0:24,0:24:72.19:0,72,2885	0/0:18,0:18:51.16:0,51,2717	0/0:13,0:13:36.10:0,36,1878	0/0:20,0:20:60.20:0,60,3258	0/0:30,0:30:63.30:0,63,4755	0/0:35,0:35:99:0,99,4817	0/0:7,0:7:21.07:0,21,1303
chr10	68311905	.	AAG	A	122.55	PASS	AB=0.907;AC=8;AF=0.148;AN=54;BaseQRankSum=0.107;DP=549;FS=5.211;HRun=0;HaplotypeScore=110.8499;InbreedingCoeff=0.0521;MQ=58.67;MQ0=12;MQRankSum=3.698;QD=0.78;ReadPosRankSum=0.020;VQSLOD=1.9518;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:30,2:32:65.43:65,0,657	0/0:12,0:10:2.55:0,3,34	0/0:29,0:10:6.02:0,6,83	0/0:44,0:15:4.33:0,4,43	0/1:51,4:55:99:132,0,1195	1/1:22,0:21:0.26:1,0,0	0/0:19,0:17:4.21:0,4,57	0/0:20,0:20:12.30:0,12,123	0/0:12,0:11:11.55:0,12,113	0/0:18,0:17:25.44:0,25,247	./.	0/0:16,0:16:18.42:0,18,113	0/1:11,2:13:21.33:21,0,374	1/1:12,0:9:0.47:1,0,0	0/0:16,0:16:17.68:0,18,131	0/0:16,0:17:19.65:0,20,138	0/0:22,0:24:20.05:0,20,136	0/0:14,0:13:17.30:0,17,120	0/0:15,0:16:23.55:0,24,199	0/0:10,0:14:3.67:0,4,48	0/0:11,0:12:5.81:0,6,25	0/0:13,0:14:6:0,6,52	0/1:21,3:23:0.90:1,0,403	0/0:8,0:8:18.06:0,18,275	0/0:9,0:10:14:0,14,107	0/0:20,0:23:42.02:0,42,435	0/0:12,0:23:14.56:0,15,148	0/0:9,0:9:15.15:0,15,101
chr10	68312118	.	G	GC	811.53	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-1.003;DP=536;FS=0.745;HRun=6;HaplotypeScore=56.1585;InbreedingCoeff=0.9771;MQ=86.83;MQ0=0;MQRankSum=-0.788;QD=27.05;ReadPosRankSum=-1.082;VQSLOD=3.5764;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,129,1290	0/0:5,0:5:12.02:0,12,122	0/0:17,0:17:35.93:0,36,339	0/0:27,0:28:57.91:0,58,651	0/0:15,0:15:44.97:0,45,440	0/0:23,0:23:57.13:0,57,581	0/0:22,0:22:63.14:0,63,643	0/0:16,0:16:36.07:0,36,363	0/0:17,0:17:48.08:0,48,476	1/1:1,17:18:51.16:632,51,0	1/1:3,9:12:24.08:300,24,0	0/0:19,0:19:57.12:0,57,575	0/0:9,0:9:21.05:0,21,214	0/0:15,0:15:32.87:0,33,336	0/0:18,0:18:51.10:0,51,515	0/0:10,0:10:27.04:0,27,267	0/0:41,0:41:99:0,108,1101	0/0:16,0:16:42.09:0,42,428	0/0:20,0:20:57.10:0,57,568	0/0:18,0:18:45.10:0,45,457	0/0:41,0:41:99:0,101,999	0/0:11,0:11:33.06:0,33,329	0/0:11,0:11:33.07:0,33,336	0/0:30,0:30:87.15:0,87,870	0/0:18,0:18:42.09:0,42,428	0/0:19,0:19:48.10:0,48,489	0/0:9,0:9:24.05:0,24,244	0/0:7,0:7:21.05:0,21,214
chr10	68313576	.	A	AT	9782.10	PASS	AB=1.000;AC=55;AF=0.982;AN=56;BaseQRankSum=1.313;DP=472;FS=0.000;HRun=1;HaplotypeScore=383.0241;InbreedingCoeff=-0.0171;MQ=36.56;MQ0=0;MQRankSum=-2.265;QD=20.72;ReadPosRankSum=0.072;VQSLOD=2.8201;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:15:32.14:218,32,0	1/1:12,0:12:35.34:249,35,0	1/1:4,2:4:5:26,5,0	0/1:6,0:6:11.53:44,0,12	1/1:27,1:28:78.72:559,79,0	1/1:25,1:26:65.16:478,65,0	1/1:8,1:9:20.70:164,21,0	1/1:18,3:21:60.01:625,60,0	1/1:13,0:13:29.35:180,29,0	1/1:24,1:25:74.41:673,74,0	1/1:9,2:11:32.44:286,32,0	1/1:24,2:26:61.56:450,62,0	1/1:15,2:17:43.93:287,44,0	1/1:17,2:19:41.57:392,42,0	1/1:25,1:26:64.46:478,64,0	1/1:24,0:24:67.92:450,68,0	1/1:1,0:1:2.97:20,3,0	1/1:7,0:7:17.88:140,18,0	1/1:14,0:14:41.57:372,42,0	1/1:25,1:26:76.73:558,77,0	1/1:10,1:11:29.27:215,29,0	1/1:24,2:26:75.22:595,75,0	1/1:18,0:18:49.12:379,49,0	1/1:8,0:8:14.70:130,15,0	1/1:16,2:18:53.69:481,54,0	1/1:26,1:27:77.84:693,78,0	1/1:23,0:22:62.16:457,62,0	1/1:8,0:8:23.84:185,24,0
chr10	68313581	.	ACCC	A	1424.56	PASS	AB=0.767;AC=50;AF=0.893;AN=56;BaseQRankSum=2.156;DP=270;FS=7.252;HRun=3;HaplotypeScore=294.0006;InbreedingCoeff=0.3296;MQ=36.90;MQ0=0;MQRankSum=-2.678;QD=5.34;ReadPosRankSum=3.575;VQSLOD=-0.7162;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:1,7:7:4.45:14,4,0	1/1:0,9:9:14.79:44,15,0	0/0:1,0:1:2.68:0,3,11	0/1:6,0:6:23.37:23,0,40	1/1:0,19:19:2.84:58,3,0	1/1:0,14:14:22.42:66,22,0	1/1:0,5:5:5.60:13,6,0	1/1:0,2:2:5.83:34,6,0	1/1:0,7:7:10.90:31,11,0	1/1:1,15:16:34.31:246,34,0	1/1:1,6:7:6.91:26,7,0	1/1:3,13:16:17.19:86,17,0	1/1:0,12:13:15.72:42,16,0	1/1:1,9:10:4.79:11,5,0	1/1:0,16:16:18.93:51,19,0	1/1:0,15:15:25.27:76,25,0	1/1:0,1:1:0.89:2,1,0	1/1:0,6:6:14.46:87,14,0	1/1:0,6:6:10.08:76,10,0	1/1:1,13:14:22.38:67,22,0	1/1:1,2:3:4.04:12,4,0	1/1:3,16:19:11.47:80,11,0	0/1:1,7:8:1.78:2,0,3	0/0:0,2:2:0:0,0,0	1/1:0,9:9:14.69:41,15,0	1/1:0,15:15:36.38:164,36,0	1/1:0,16:16:17.37:92,17,0	1/1:0,7:7:18.71:82,19,0
chr10	68313588	.	T	TTGTTG	20480.54	PASS	AB=0.625;AC=53;AF=0.946;AN=56;BaseQRankSum=3.378;DP=387;FS=4.805;HRun=0;HaplotypeScore=406.0363;InbreedingCoeff=0.5455;MQ=31.69;MQ0=0;MQRankSum=-3.442;QD=53.06;ReadPosRankSum=2.703;VQSLOD=4.1072;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,7:9:18.06:331,18,0	1/1:0,9:9:27.09:452,27,0	0/0:1,0:1:2.84:0,3,14	0/1:1,0:5:4.01:4,0,36	1/1:13,19:32:78.36:1448,78,0	1/1:3,14:17:45.15:858,45,0	1/1:4,5:9:24.08:478,24,0	1/1:7,2:9:24.08:656,24,0	1/1:4,7:11:30.10:665,30,0	1/1:13,15:28:78.23:1692,78,0	1/1:1,6:7:21.07:349,21,0	1/1:9,13:22:60.16:1275,60,0	1/1:6,12:18:54.18:980,54,0	1/1:8,9:17:36.12:764,36,0	1/1:3,16:19:54.18:965,54,0	1/1:5,15:20:60.20:1144,60,0	1/1:3,1:4:12.04:266,12,0	1/1:2,6:8:21.07:451,21,0	1/1:6,6:12:35.91:767,36,0	1/1:6,13:19:54.18:1030,54,0	1/1:4,2:6:15.05:324,15,0	1/1:6,16:22:66.22:1225,66,0	1/1:4,7:11:32.94:585,33,0	1/1:4,2:6:6.02:130,6,0	1/1:4,9:13:36.12:653,36,0	1/1:6,15:21:63.19:1209,63,0	1/1:7,16:23:69.23:1337,69,0	1/1:2,7:9:24.08:441,24,0
chr10	68314100	.	TG	T	3083.91	PASS	AB=0.832;AC=33;AF=0.589;AN=56;BaseQRankSum=-2.660;DP=451;FS=15.731;HRun=11;HaplotypeScore=56.0886;InbreedingCoeff=0.6471;MQ=78.99;MQ0=9;MQRankSum=0.048;QD=10.45;ReadPosRankSum=6.496;VQSLOD=0.7756;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:29.37:0,29,266	1/1:4,4:8:14.95:123,15,0	0/0:39,0:21:4.50:0,5,121	0/1:29,0:21:0.52:1,0,56	0/1:26,1:26:14.82:15,0,223	1/1:3,12:14:29.96:246,30,0	1/1:1,22:22:44.92:369,45,0	0/0:12,1:13:9.01:0,9,87	0/0:12,0:12:17.88:0,18,130	0/0:6,0:6:3:0,3,26	0/0:0,0:6:1.25:0,1,3	1/1:5,11:15:26.96:221,27,0	0/0:8,0:8:1.15:0,1,70	1/1:5,10:15:20.96:171,21,0	1/1:7,5:12:23.87:181,24,0	0/1:3,10:13:1.82:191,0,2	1/1:10,19:29:56.90:466,57,0	0/0:21,0:21:8.92:0,9,66	1/1:6,6:12:4.06:121,4,0	1/1:3,7:10:17.98:148,18,0	1/1:4,7:11:20.97:172,21,0	1/1:6,4:10:14.98:122,15,0	0/0:8,0:8:2.99:0,3,24	0/0:21,1:22:15.79:0,16,319	1/1:8,5:12:6.95:104,7,0	1/1:8,8:17:19.95:153,20,0	1/1:9,14:21:41.93:343,42,0	1/1:6,5:11:14.97:123,15,0
chr10	68316565	.	C	CA	792.87	PASS	AB=0.844;AC=6;AF=0.107;AN=56;BaseQRankSum=-3.879;DP=521;FS=0.000;HRun=10;HaplotypeScore=51.5676;InbreedingCoeff=0.3744;MQ=72.82;MQ0=0;MQRankSum=-1.064;QD=10.04;ReadPosRankSum=-0.716;VQSLOD=1.8550;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:34:91.90:0,92,741	0/0:4,0:4:11.99:0,12,98	0/0:10,0:11:21.60:0,22,168	0/1:6,1:7:18.07:18,0,39	0/0:18,0:18:44.92:0,45,369	0/0:18,0:19:52.96:0,53,425	0/0:14,0:14:29.96:0,30,246	0/0:31,0:32:47.45:0,47,544	0/0:20,0:20:44.93:0,45,369	1/1:7,16:23:48.12:511,48,0	0/1:6,13:19:25.81:367,0,26	0/0:19,1:20:24.95:0,25,411	0/0:24,0:24:68.92:0,69,566	0/0:14,0:14:41.93:0,42,342	0/0:25,0:25:59.87:0,60,489	0/0:22,0:22:65.91:0,66,539	0/0:16,0:17:40.98:0,41,326	0/0:14,0:14:26.93:0,27,222	0/0:17,0:17:44.90:0,45,367	0/0:28,0:28:74.89:0,75,616	0/0:20,0:20:50.91:0,51,419	0/0:11,0:12:32:0,32,252	0/0:13,0:13:38.94:0,39,317	0/0:14,0:14:32.95:0,33,271	0/0:17,0:19:52.01:0,52,406	0/1:26,3:29:18.07:18,0,489	0/0:30,0:30:74.87:0,75,615	0/1:1,0:1:0:0,0,0
chr10	68316891	.	A	ATGACG	4383.90	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-7.969;DP=764;FS=3.471;HRun=0;HaplotypeScore=139.9040;InbreedingCoeff=0.9823;MQ=89.79;MQ0=0;MQRankSum=-5.278;QD=71.87;ReadPosRankSum=1.821;VQSLOD=6.6196;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:57:99:0,166,3500	0/0:4,0:4:12.04:0,12,261	0/0:34,0:34:85.48:0,85,1664	0/0:27,0:27:72.21:0,72,1408	0/0:33,0:33:99:0,99,2068	0/0:23,0:23:63.22:0,63,1368	0/0:25,0:25:72.23:0,72,1520	0/0:26,0:26:69.23:0,69,1437	0/0:21,0:21:63.22:0,63,1324	1/1:8,28:36:90.31:2773,90,0	1/1:2,20:25:51.18:1611,51,0	0/0:28,0:28:84.29:0,84,1822	0/0:27,0:27:78.26:0,78,1653	0/0:31,0:31:90.31:0,90,1938	0/0:38,0:38:99:0,108,2343	0/0:30,0:30:90.27:0,90,1854	0/0:20,0:20:57.20:0,57,1211	0/0:20,0:20:57.18:0,57,1171	0/0:27,0:27:78.27:0,78,1636	0/0:32,0:32:93.32:0,93,2020	0/0:47,0:47:99:0,135,2905	0/0:16,0:16:45.14:0,45,937	0/0:22,0:22:66.21:0,66,1353	0/0:35,0:35:99:0,105,2240	0/0:15,0:15:45.15:0,45,976	0/0:29,0:29:84.26:0,84,1707	0/0:29,0:29:78.27:0,78,1694	0/0:7,0:7:21.07:0,21,456
chr10	68317236	.	G	GT	437.96	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=-2.246;DP=564;FS=1.730;HRun=9;HaplotypeScore=55.6428;InbreedingCoeff=0.5348;MQ=71.10;MQ0=7;MQRankSum=0.133;QD=7.96;ReadPosRankSum=-1.198;VQSLOD=1.1120;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:71.96:0,72,621	0/0:7,0:7:14.99:0,15,130	0/0:36,1:17:1.49:0,1,104	0/1:36,0:19:7.78:8,0,72	0/0:30,0:30:80.98:0,81,703	0/0:21,0:21:58.12:0,58,518	0/0:8,0:8:14.98:0,15,130	0/0:30,0:29:39.63:0,40,496	0/0:8,0:8:24:0,24,208	0/0:24,0:24:56.96:0,57,489	0/0:17,0:17:41.98:0,42,363	0/0:9,0:9:23.98:0,24,206	0/0:13,0:13:32.99:0,33,286	0/0:12,0:12:32.98:0,33,282	0/0:25,0:25:71.95:0,72,617	0/0:19,0:19:50.98:0,51,443	0/0:32,0:32:89.81:0,90,758	1/1:0,19:19:48.13:531,48,0	0/0:18,0:18:44.96:0,45,386	0/0:26,0:26:68.87:0,69,577	0/0:11,0:11:29.99:0,30,260	0/0:16,0:16:41.89:0,42,353	0/0:21,0:21:56.96:0,57,489	0/0:2,0:2:6:0,6,52	0/0:16,0:16:41.97:0,42,361	0/0:33,0:33:86.97:0,87,753	0/0:28,0:28:68.94:0,69,590	0/0:21,0:21:62.99:0,63,546
chr10	68320881	.	A	AT	1152.95	PASS	AB=0.882;AC=5;AF=0.089;AN=56;BaseQRankSum=-6.735;DP=559;FS=2.645;HRun=10;HaplotypeScore=54.2752;InbreedingCoeff=0.7231;MQ=66.01;MQ0=0;MQRankSum=-0.203;QD=16.96;ReadPosRankSum=0.897;VQSLOD=4.1416;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,1:26:26.89:0,27,453	0/0:8,0:8:23.97:0,24,197	0/0:10,0:9:17.75:0,18,132	0/0:7,0:7:4.28:0,4,46	0/0:36,0:35:72.92:0,73,668	0/0:21,0:21:50.93:0,51,419	0/0:21,0:22:58.93:0,59,466	0/0:33,0:32:74.86:0,75,612	0/0:16,0:16:41.94:0,42,345	1/1:5,21:26:60.14:633,60,0	1/1:4,23:27:60.11:627,60,0	0/0:12,0:12:26.96:0,27,222	0/0:17,0:17:47.92:0,48,390	0/0:12,0:12:29.96:0,30,246	0/0:15,0:15:41.91:0,42,339	0/0:19,0:20:49.94:0,50,394	0/0:25,0:25:67:0,67,551	0/0:16,0:16:32.94:0,33,271	0/0:19,1:20:18.51:0,19,342	0/0:32,0:32:83.24:0,83,656	0/0:14,0:14:38.82:0,39,302	0/0:26,0:26:62.65:0,63,502	0/0:20,0:20:50.74:0,51,407	0/1:13,2:15:22.03:22,0,251	0/0:14,0:14:35.93:0,36,296	0/0:30,1:31:45.82:0,46,584	0/0:33,0:32:77.84:0,78,640	0/0:5,0:5:14.98:0,15,123
chr10	68321033	.	C	CT	482.19	PASS	AB=0.907;AC=9;AF=0.161;AN=56;BaseQRankSum=-2.697;DP=493;FS=1.404;HRun=14;HaplotypeScore=60.8783;InbreedingCoeff=0.2882;MQ=74.17;MQ0=1;MQRankSum=0.131;QD=4.34;ReadPosRankSum=-2.919;VQSLOD=0.5591;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:32:43.92:0,44,275	0/0:6,0:6:8.81:0,9,58	0/1:20,0:15:2.91:3,0,47	0/0:13,0:10:1.65:0,2,7	0/0:19,0:18:23.42:0,23,154	0/0:13,0:13:23.53:0,24,150	0/0:16,1:18:7:0,7,121	0/0:26,0:30:29.68:0,30,173	0/0:19,0:18:32.43:0,32,210	1/1:4,20:25:49.02:399,49,0	1/1:3,11:15:22.04:168,22,0	0/1:9,1:12:7.14:7,0,70	0/0:12,0:13:20.63:0,21,134	0/0:22,0:24:46.25:0,46,294	0/0:14,0:16:25.63:0,26,159	0/0:22,2:25:25.88:0,26,287	0/0:17,1:20:22.79:0,23,244	0/0:13,1:14:0.19:0,0,127	0/0:16,1:18:5.07:0,5,151	0/0:18,0:18:7.01:0,7,149	0/1:11,1:12:2.79:3,0,107	0/0:11,0:12:19.69:0,20,120	0/1:12,1:14:9.68:10,0,65	0/0:12,0:13:22.60:0,23,140	0/1:9,3:12:29.08:29,0,92	0/0:22,1:25:5.96:0,6,136	0/0:23,4:28:16.33:0,16,215	0/0:6,0:6:14.70:0,15,94
chr10	68328195	.	ATTGT	A	877.69	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.167;DP=731;FS=0.854;HRun=0;HaplotypeScore=118.2841;InbreedingCoeff=0.9457;MQ=68.83;MQ0=5;MQRankSum=0.731;QD=35.11;ReadPosRankSum=0.788;VQSLOD=3.8842;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:87.23:0,87,1903	0/0:8,0:8:24.04:0,24,480	0/0:45,0:36:15.05:0,15,245	0/0:22,0:18:21.05:0,21,333	0/0:32,0:32:72.23:0,72,1670	0/0:16,0:16:33.11:0,33,733	0/0:34,0:34:71.46:0,71,1565	0/0:25,0:25:42.14:0,42,887	1/1:3,22:25:60.20:973,60,0	0/0:38,0:38:81.28:0,81,1911	0/0:28,0:28:69.22:0,69,1597	0/0:15,0:15:36.12:0,36,807	0/0:27,0:27:57.18:0,57,1246	0/0:24,0:24:60.20:0,60,1439	0/0:24,0:24:51.16:0,51,1152	0/0:26,0:26:60.10:0,60,1386	0/0:33,0:33:81.28:0,81,1868	0/0:10,0:20:21.07:0,21,405	0/0:24,0:24:36:0,36,676	0/0:28,0:28:60.18:0,60,1398	0/0:27,0:27:66.19:0,66,1464	0/0:20,0:20:45.15:0,45,1052	0/0:19,0:19:33.10:0,33,716	0/0:36,0:36:78.27:0,78,1765	0/0:20,0:20:45.08:0,45,983	0/0:34,0:34:75.17:0,75,1735	0/0:29,0:29:78.21:0,78,1673	0/0:8,0:8:12.04:0,12,290
chr10	68328811	.	TTTTTTTTTTTTTTTC	T	801.05	PASS	AB=0.810;AC=4;AF=0.071;AN=56;BaseQRankSum=5.021;DP=591;FS=11.267;HRun=0;HaplotypeScore=189.0737;InbreedingCoeff=0.3095;MQ=54.71;MQ0=81;MQRankSum=0.295;QD=11.96;ReadPosRankSum=1.714;VQSLOD=1.7618;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:34:94.34:0,94,3727	0/0:11,0:10:27.04:0,27,503	0/0:47,0:9:6.40:0,6,38	0/0:37,0:13:20.88:0,21,159	0/0:23,0:20:51.97:0,52,1192	0/0:17,0:16:17.99:0,18,425	0/0:16,0:15:33.09:0,33,841	0/0:32,0:28:67.88:0,68,1591	0/1:19,0:17:49.14:321,0,49	1/1:9,13:21:4.99:386,5,0	0/1:9,16:25:99:199,0,152	0/0:19,0:19:54.04:0,54,1644	0/0:6,0:5:12.04:0,12,487	0/0:16,0:11:23.97:0,24,700	0/0:17,0:15:36.12:0,36,1097	0/0:9,0:8:14.71:0,15,347	0/0:38,0:30:45.07:0,45,1119	0/0:20,0:15:18.03:0,18,596	0/0:19,0:13:30.08:0,30,797	0/0:26,0:24:59.83:0,60,1368	0/0:12,0:11:29.22:0,29,558	0/0:15,0:13:27.08:0,27,653	0/0:17,0:16:39.13:0,39,1590	0/0:4,0:4:8.98:0,9,315	0/0:17,0:13:30:0,30,690	0/0:21,0:20:49.41:0,49,1348	0/0:28,0:21:30.10:0,30,829	0/0:19,0:11:27.01:0,27,545
chr10	68329633	.	CTTTG	C	444.70	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.195;DP=562;FS=2.690;HRun=0;HaplotypeScore=91.1111;InbreedingCoeff=0.9404;MQ=72.92;MQ0=0;MQRankSum=-0.231;QD=24.71;ReadPosRankSum=2.304;VQSLOD=3.5356;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,105,2672	0/0:3,0:3:9.03:0,9,233	0/0:17,0:17:35.92:0,36,629	0/0:11,0:11:26.92:0,27,586	0/0:36,0:36:90.31:0,90,2211	0/0:29,0:29:81.28:0,81,1999	0/0:14,0:14:39.13:0,39,1009	0/0:31,0:31:81.26:0,81,1864	0/0:18,0:18:51.17:0,51,1259	0/0:27,0:27:78.25:0,78,1845	0/0:31,0:31:87.29:0,87,2015	0/0:15,0:15:42.14:0,42,1050	0/0:25,0:25:69.24:0,69,1772	0/0:12,0:12:36.12:0,36,895	0/0:21,0:21:63.22:0,63,1627	0/0:19,0:19:51.18:0,51,1303	0/0:27,0:27:78.25:0,78,1818	1/1:0,18:18:30.10:539,30,0	0/0:16,0:16:39.13:0,39,973	0/0:20,0:20:60.21:0,60,1548	0/0:12,0:12:36.12:0,36,931	0/0:21,0:21:51.16:0,51,1187	0/0:21,0:21:51.16:0,51,1191	0/0:11,0:11:27.09:0,27,690	0/0:12,0:12:33.09:0,33,760	0/0:20,0:20:57.20:0,57,1439	0/0:31,0:31:84.29:0,84,2171	0/0:8,0:8:24.08:0,24,545
chr10	68333631	.	T	TAGATAGATAGAA	6733.45	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=6.818;DP=716;FS=17.513;HRun=0;HaplotypeScore=254.9402;InbreedingCoeff=-0.1936;MQ=60.71;MQ0=10;MQRankSum=-5.481;QD=14.12;ReadPosRankSum=-5.772;VQSLOD=1.4830;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:22:99:174,0,132	0/1:14,0:14:99:369,0,118	0/0:16,0:13:39.09:0,39,447	0/0:11,0:9:27.01:0,27,267	0/0:30,0:30:57.29:0,57,450	0/1:23,0:23:99:300,0,195	0/1:20,0:20:4.46:4,0,278	1/1:43,0:34:93.84:880,94,0	1/1:4,18:27:15.05:685,15,0	0/0:23,0:23:7.68:0,8,470	0/0:22,0:22:59.40:0,59,454	0/1:33,0:33:99:266,0,469	0/0:31,0:31:86.97:0,87,1131	0/1:22,0:22:99:217,0,254	0/1:40,0:40:99:533,0,408	0/1:31,0:31:99:113,0,366	0/1:25,0:25:99:455,0,188	0/0:23,0:22:50.80:0,51,671	0/0:19,0:18:16.91:0,17,345	0/1:36,0:35:99:212,0,411	0/0:19,0:19:29.30:0,29,242	0/1:17,0:15:30.88:31,0,232	0/0:23,0:23:68.89:0,69,737	0/0:22,0:22:50.43:0,50,1173	0/1:42,0:42:99:553,0,396	0/1:28,0:27:99:514,0,386	0/1:36,0:36:99:709,0,326	0/1:18,0:18:99:718,0,197
chr10	68334086	.	T	TTG	3948.92	PASS	AB=0.993;AC=35;AF=0.625;AN=56;BaseQRankSum=2.065;DP=642;FS=5.965;HRun=0;HaplotypeScore=101.2709;InbreedingCoeff=0.4760;MQ=42.09;MQ0=48;MQRankSum=-0.116;QD=9.70;ReadPosRankSum=2.838;VQSLOD=3.1064;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:41.66:0,42,317	1/1:12,0:10:14.16:156,14,0	0/0:72,0:7:13.71:0,14,79	0/0:70,0:8:14.43:0,14,97	0/0:18,1:19:46.41:0,46,364	0/1:18,1:17:16.87:170,0,17	1/1:14,0:14:20.87:194,21,0	1/1:33,0:27:17.38:263,17,0	0/1:17,0:13:35.22:70,0,35	1/1:20,0:17:27.52:271,28,0	1/1:12,9:21:26.76:254,27,0	1/1:15,0:13:4.73:40,5,0	0/0:18,0:17:46.30:0,46,376	0/1:15,0:15:8.23:68,0,8	1/1:23,0:22:8.97:229,9,0	0/1:26,0:26:2.13:79,0,2	0/1:25,0:25:35.76:223,0,36	1/1:18,0:14:12.99:193,13,0	1/1:30,0:26:19.55:334,20,0	1/1:31,0:31:65.58:484,66,0	1/1:13,0:11:5.96:103,6,0	1/1:16,0:16:11.75:164,12,0	0/0:15,0:15:29.62:0,30,222	0/0:21,0:20:47.28:0,47,449	0/1:15,0:13:13.93:47,0,14	1/1:13,7:19:24.58:275,25,0	1/1:14,0:14:34.96:254,35,0	0/1:8,0:6:1.21:79,0,1
chr10	68334087	.	T	TG	3096.59	PASS	AB=0.825;AC=34;AF=0.607;AN=56;BaseQRankSum=2.799;DP=639;FS=2.973;HRun=0;HaplotypeScore=92.1553;InbreedingCoeff=0.3609;MQ=41.95;MQ0=48;MQRankSum=1.640;QD=7.66;ReadPosRankSum=3.394;VQSLOD=3.1190;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:42.25:0,42,322	1/1:8,4:10:10.80:145,11,0	0/0:73,0:7:14.02:0,14,83	0/0:70,0:8:17.14:0,17,101	0/0:18,0:18:51.96:0,52,397	0/1:9,10:17:12.93:82,0,13	1/1:3,10:13:20.64:166,21,0	1/1:32,3:29:18.74:284,19,0	0/1:17,0:13:55.26:56,0,55	1/1:8,12:17:26.15:224,26,0	1/1:15,5:20:16.60:251,17,0	1/1:4,9:12:4.49:34,4,0	0/0:17,0:16:45.88:0,46,356	0/1:9,6:15:23.97:36,0,24	1/1:20,3:22:22.28:206,22,0	0/1:8,16:26:18.44:77,0,18	0/1:21,4:25:22.69:147,0,23	1/1:17,1:14:8.43:131,8,0	1/1:28,2:25:3.98:241,4,0	1/1:27,4:31:51.82:425,52,0	1/1:3,8:10:5.96:67,6,0	0/1:13,3:16:3.59:141,0,4	0/0:15,0:15:28.93:0,29,213	0/0:21,0:20:50.49:0,50,443	0/1:14,1:13:14.39:42,0,14	1/1:16,5:19:22.07:265,22,0	1/1:12,2:14:33.55:225,34,0	0/1:8,0:6:12.11:45,0,12
chr10	68334089	.	T	TTG	161.91	PASS	AB=0.976;AC=14;AF=0.250;AN=56;BaseQRankSum=5.181;DP=641;FS=0.000;HRun=0;HaplotypeScore=109.6122;InbreedingCoeff=-0.1354;MQ=41.77;MQ0=49;MQRankSum=1.445;QD=0.56;ReadPosRankSum=3.698;VQSLOD=1.6120;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:22:44.82:0,45,345	0/1:10,1:9:17.47:17,0,18	0/1:73,0:7:4.44:4,0,30	0/0:73,0:9:20.21:0,20,145	0/0:18,0:18:53.10:0,53,433	0/1:18,1:17:27.19:27,0,56	0/1:13,0:13:8.97:29,0,9	0/0:36,0:30:50.07:0,50,292	0/0:15,0:11:9.85:0,10,99	0/1:15,3:15:33.67:34,0,38	0/0:22,0:22:19.91:0,20,146	0/1:14,0:12:9.55:13,0,10	0/0:17,0:16:46.94:0,47,381	0/0:15,0:15:23.75:0,24,126	0/1:23,0:22:15.10:15,0,121	0/1:25,0:25:2.20:2,0,83	0/0:27,0:27:24.78:0,25,230	1/1:17,0:13:1.83:76,2,0	0/1:28,0:24:22.27:22,0,88	0/0:31,0:32:3.72:0,4,196	0/1:12,0:10:5.09:17,0,5	0/0:15,1:16:5.06:0,5,134	0/0:13,0:13:29.71:0,30,227	0/0:21,0:20:48.96:0,49,451	0/0:16,0:14:5.65:0,6,45	0/1:21,0:19:23.50:24,0,111	0/1:14,0:14:8.42:26,0,8	0/0:8,0:6:2.43:0,2,54
chr10	68334651	.	G	GT	1107.69	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-7.137;DP=637;FS=0.000;HRun=8;HaplotypeScore=58.6906;InbreedingCoeff=0.9383;MQ=85.79;MQ0=0;MQRankSum=-0.085;QD=27.02;ReadPosRankSum=1.241;VQSLOD=4.1677;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,126,1153	0/0:10,0:10:21:0,21,192	0/0:20,0:20:45:0,45,407	0/0:20,0:21:43.81:0,44,352	0/0:23,0:23:53.98:0,54,482	0/0:27,0:27:69.02:0,69,627	0/0:17,0:17:48.02:0,48,439	0/0:37,0:37:86.96:0,87,782	0/0:21,0:21:63.03:0,63,577	1/1:1,21:22:63.18:718,63,0	1/1:2,17:19:23.62:510,24,0	0/0:21,0:21:60.03:0,60,549	0/0:15,0:15:30:0,30,275	0/0:15,0:15:39:0,39,352	0/0:32,0:32:87.04:0,87,796	0/0:22,0:22:63.03:0,63,577	0/0:28,0:28:78.04:0,78,714	0/0:23,0:23:63.01:0,63,571	0/0:21,1:22:19.37:0,19,421	0/0:25,0:25:72.04:0,72,659	0/0:26,0:26:72.02:0,72,654	0/0:17,0:17:48.03:0,48,439	0/0:18,0:18:51:0,51,460	0/0:26,0:26:69.03:0,69,631	0/0:19,0:19:48:0,48,434	0/0:26,2:28:17.94:0,18,599	0/0:34,0:34:96.03:0,96,873	0/0:2,0:2:6:0,6,55
chr10	68335932	.	TG	T	2161.01	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.065;DP=658;FS=1.734;HRun=1;HaplotypeScore=59.7117;InbreedingCoeff=0.9987;MQ=86.26;MQ0=0;MQRankSum=-1.041;QD=39.29;ReadPosRankSum=1.954;VQSLOD=4.3414;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:87.28:0,87,1365	0/0:10,0:10:30.10:0,30,479	0/0:27,0:27:81.27:0,81,1266	0/0:17,0:17:51.17:0,51,783	0/0:32,0:32:96.31:0,96,1510	0/0:22,0:22:66.23:0,66,1055	0/0:27,0:27:81.22:0,81,1242	0/0:33,0:33:96.29:0,96,1468	0/0:23,0:23:66.21:0,66,1025	1/1:1,27:28:84.27:1150,84,0	1/1:0,27:27:81.27:1133,81,0	0/0:19,0:19:57.17:0,57,863	0/0:30,0:30:90.31:0,90,1438	0/0:23,0:23:69.24:0,69,1102	0/0:17,0:17:51.14:0,51,768	0/0:24,0:24:72.23:0,72,1125	0/0:40,0:40:99:0,120,1891	0/0:28,0:27:84.29:0,84,1339	0/0:29,0:29:84.24:0,84,1260	0/0:25,0:25:75.26:0,75,1199	0/0:15,0:15:45.15:0,45,719	0/0:16,0:16:48.15:0,48,743	0/0:22,0:22:66.19:0,66,1006	0/0:19,0:19:54.18:0,54,847	0/0:21,0:21:60.19:0,60,936	0/0:23,0:23:69.23:0,69,1080	0/0:24,0:24:69.24:0,69,1099	0/0:8,0:8:24.08:0,24,383
chr10	68338769	.	A	ATT	23424.66	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=-15.079;DP=616;FS=0.349;HRun=2;HaplotypeScore=59.7789;InbreedingCoeff=0.9999;MQ=77.26;MQ0=0;MQRankSum=-2.742;QD=51.26;ReadPosRankSum=2.613;VQSLOD=4.6023;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:84.27:0,84,1253	1/1:0,15:15:42.14:811,42,0	0/0:15,0:15:39.03:0,39,493	0/0:18,0:18:39.07:0,39,521	0/0:29,0:29:87.26:0,87,1276	1/1:0,24:24:66.23:1275,66,0	1/1:0,12:12:33.11:637,33,0	1/1:4,36:40:99:2093,117,0	1/1:0,19:19:53.89:1043,54,0	1/1:1,21:22:63.22:1217,63,0	1/1:0,25:25:72.16:1312,72,0	1/1:1,16:17:42.14:811,42,0	0/0:35,0:35:99:0,105,1562	1/1:0,19:21:60.21:1140,60,0	1/1:0,23:24:57.20:1101,57,0	1/1:0,17:18:42.14:809,42,0	1/1:0,18:19:51.17:985,51,0	1/1:1,18:19:45.15:858,45,0	1/1:4,14:18:54.15:1000,54,0	1/1:0,38:39:99:1977,114,0	1/1:1,18:19:48.16:927,48,0	1/1:0,15:16:45.01:754,45,0	0/0:22,0:22:63.20:0,63,942	0/0:12,0:12:33.09:0,33,483	1/1:1,29:30:78.27:1507,78,0	1/1:0,18:18:54.19:1043,54,0	1/1:0,22:24:57.20:1101,57,0	1/1:1,17:18:54.18:1021,54,0
chr10	68341858	.	G	GAA	638.02	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-3.837;DP=560;FS=0.929;HRun=9;HaplotypeScore=63.7280;InbreedingCoeff=0.9396;MQ=71.12;MQ0=3;MQRankSum=0.868;QD=31.90;ReadPosRankSum=0.392;VQSLOD=3.7514;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:93.20:0,93,980	0/0:14,0:13:33.05:0,33,343	0/0:20,0:16:10.15:0,10,77	0/0:14,0:13:18.30:0,18,152	0/0:28,0:28:78.19:0,78,830	0/0:19,0:18:57.13:0,57,599	0/0:15,0:15:42.09:0,42,447	0/0:27,0:27:75.17:0,75,786	0/0:17,0:17:51.10:0,51,526	0/0:27,0:27:72.17:0,72,766	0/0:21,0:21:57.12:0,57,599	0/0:22,0:22:66.17:0,66,702	0/0:12,0:12:36.09:0,36,383	0/0:18,0:18:54.12:0,54,567	0/0:18,0:18:48.09:0,48,503	0/0:20,0:20:54.13:0,54,575	0/0:23,0:23:66.11:0,66,683	1/1:1,18:19:50.84:733,51,0	0/0:17,0:17:48.09:0,48,496	0/0:40,0:40:99:0,111,1165	0/0:7,0:7:18.03:0,18,192	0/0:20,0:21:50.86:0,51,523	0/0:15,0:15:36.08:0,36,383	0/0:9,0:9:24.06:0,24,255	0/0:17,0:17:45.11:0,45,479	0/0:24,0:24:66.14:0,66,697	0/0:24,0:24:66.16:0,66,702	0/0:15,0:15:42.11:0,42,447
chr10	68343417	.	AGTGTGTGTGTGTGTGTGTGT	A	381.84	PASS	AB=0.684;AC=3;AF=0.056;AN=54;BaseQRankSum=3.328;DP=477;FS=1.917;HRun=0;HaplotypeScore=215.5993;InbreedingCoeff=0.3551;MQ=69.63;MQ0=20;MQRankSum=-0.515;QD=11.57;ReadPosRankSum=0.186;VQSLOD=2.7489;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:30.08:0,30,1775	0/0:9,0:9:12.04:0,12,487	0/0:31,0:16:6.02:0,6,177	0/0:39,0:27:15.05:0,15,349	0/0:12,0:12:21.06:0,21,1342	0/0:11,0:11:21.06:0,21,921	0/0:20,0:20:30.10:0,30,1287	0/0:26,0:26:35.14:0,35,1108	0/1:7,0:12:66.41:112,0,66	1/1:15,5:19:8.38:365,8,0	./.	0/0:17,0:14:6.02:0,6,276	0/0:18,0:16:33.08:0,33,1666	0/0:12,0:11:15.94:0,16,704	0/0:19,0:18:21.07:0,21,876	0/0:19,0:18:27.09:0,27,1380	0/0:23,0:22:21.53:0,22,745	0/0:5,0:4:9.03:0,9,172	0/0:13,0:12:7.84:0,8,169	0/0:12,0:11:26.97:0,27,919	0/0:15,0:15:30.57:0,31,1414	0/0:7,0:6:3.01:0,3,167	0/0:13,0:12:9.01:0,9,417	0/0:22,0:22:48.15:0,48,2705	0/0:10,0:10:9.03:0,9,386	0/0:18,0:18:24.08:0,24,1118	0/0:21,0:20:30.57:0,31,1585	0/0:18,0:16:12.04:0,12,473
chr10	68343465	.	TGAGAGAGAGAGA	T	1356.20	PASS	AB=0.925;AC=21;AF=0.420;AN=50;BaseQRankSum=4.296;DP=445;FS=22.883;HRun=0;HaplotypeScore=160.2223;InbreedingCoeff=0.4000;MQ=44.80;MQ0=28;MQRankSum=2.116;QD=6.43;ReadPosRankSum=0.957;VQSLOD=0.5991;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:25:27.09:0,27,968	1/1:8,0:8:2.52:23,3,0	./.	./.	0/0:12,0:12:18.04:0,18,561	1/1:16,0:15:12.92:182,13,0	1/1:14,0:18:1.99:28,2,0	0/0:21,0:20:14.72:0,15,93	0/0:13,0:11:3.15:0,3,12	0/0:15,0:14:17.94:0,18,266	0/0:18,0:18:9.03:0,9,147	0/1:14,0:12:1.76:141,0,2	0/0:12,0:11:18.95:0,19,514	1/1:21,0:19:13.58:183,14,0	0/1:16,4:19:0.26:0,0,0	1/1:21,0:19:15.63:105,16,0	0/0:14,9:21:3.01:0,3,41	1/1:6,0:4:6.02:168,6,0	1/1:9,0:9:0.28:20,0,0	0/0:10,1:14:1.82:0,2,5	0/1:22,0:21:45.32:112,0,45	./.	0/0:14,0:13:6.02:0,6,213	0/0:37,0:35:35.85:0,36,907	1/1:11,0:11:5.74:98,6,0	0/1:14,4:19:47.63:232,0,48	0/1:22,0:19:14.50:223,0,15	0/0:12,0:10:2.84:0,3,14
chr10	68346096	.	G	GA	6697.36	PASS	AB=1.000;AC=33;AF=0.589;AN=56;BaseQRankSum=-9.828;DP=473;FS=21.050;HRun=9;HaplotypeScore=50.1383;InbreedingCoeff=0.9420;MQ=78.54;MQ0=0;MQRankSum=0.314;QD=23.92;ReadPosRankSum=1.545;VQSLOD=3.4922;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:83.91:0,84,717	1/1:0,9:10:26.91:280,27,0	0/0:10,0:10:13.54:0,14,107	0/1:13,0:12:3.87:4,0,25	0/0:16,0:16:17.60:0,18,313	1/1:2,10:12:21.06:232,21,0	1/1:2,15:17:42.11:465,42,0	0/0:26,0:26:62.78:0,63,520	0/0:11,0:11:32.98:0,33,282	0/0:13,0:13:26.88:0,27,226	0/0:14,0:14:29.95:0,30,255	1/1:0,19:20:47.96:512,48,0	0/0:14,0:14:32.99:0,33,286	1/1:1,15:16:39.11:432,39,0	1/1:3,16:19:45.12:498,45,0	1/1:2,15:17:45.12:498,45,0	1/1:1,20:21:48.08:531,48,0	0/0:23,0:23:47.94:0,48,417	1/1:2,8:10:24.05:255,24,0	1/1:2,9:11:26.99:272,27,0	1/1:2,16:18:42.11:465,42,0	1/1:3,18:21:54.06:563,54,0	0/0:16,0:16:38.93:0,39,331	0/0:19,0:19:50.98:0,51,443	1/1:5,17:22:39.11:431,39,0	1/1:7,16:23:32.51:466,33,0	1/1:4,13:18:42.11:464,42,0	1/1:0,11:11:30.08:332,30,0
chr10	68347156	.	AGAGAGAG	A	1821.97	PASS	AB=1.000;AC=36;AF=0.667;AN=54;BaseQRankSum=-0.391;DP=252;FS=31.789;HRun=0;HaplotypeScore=51.5605;InbreedingCoeff=0.3386;MQ=35.99;MQ0=8;MQRankSum=-0.299;QD=9.85;ReadPosRankSum=1.481;VQSLOD=0.4167;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:17:1.35:0,1,4	1/1:8,0:8:9.02:115,9,0	./.	0/0:3,0:1:0:0,0,0	0/0:12,0:12:2.54:0,3,43	0/1:12,0:11:9.99:16,0,10	1/1:10,0:9:5.36:30,5,0	1/1:7,0:7:21.02:217,21,0	1/1:4,0:4:3.01:33,3,0	0/1:18,0:16:99:296,0,291	0/0:5,0:5:3:0,3,25	1/1:9,0:8:5.83:57,6,0	1/1:4,0:4:12.03:135,12,0	0/1:9,0:8:0:0,0,0	1/1:2,13:15:9.03:124,9,0	1/1:0,11:11:9.03:193,9,0	1/1:13,0:12:9.03:115,9,0	1/1:7,0:7:3.01:61,3,0	1/1:7,0:5:12.04:153,12,0	1/1:0,7:7:3.01:81,3,0	0/0:10,0:7:5.77:0,6,57	1/1:9,0:9:9.02:103,9,0	0/1:11,0:11:0:1,0,0	0/0:16,0:13:2.77:0,3,21	1/1:1,8:9:3.01:38,3,0	1/1:8,0:6:11.12:179,11,0	1/1:7,0:7:2.01:6,2,0	0/0:2,0:2:0:0,0,0
chr10	68347158	.	AGAGAG	A	1843.20	PASS	AB=1.000;AC=40;AF=0.769;AN=52;BaseQRankSum=-1.462;DP=227;FS=8.069;HRun=0;HaplotypeScore=42.4107;InbreedingCoeff=0.2508;MQ=35.63;MQ0=8;MQRankSum=0.140;QD=9.65;ReadPosRankSum=-0.318;VQSLOD=0.5190;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:17:2.72:14,3,0	1/1:6,0:6:9.03:115,9,0	./.	0/0:3,0:1:0:0,0,0	0/0:10,0:10:0:0,0,1	1/1:9,1:9:5.99:86,6,0	1/1:2,8:9:6.02:105,6,0	1/1:7,0:7:21.02:217,21,0	1/1:4,0:4:3.01:33,3,0	0/1:18,0:16:99:296,0,153	0/0:3,0:3:0:0,0,0	1/1:7,0:7:5.66:58,6,0	1/1:4,0:4:12.03:135,12,0	0/1:7,0:7:0:0,0,0	1/1:13,0:13:8.64:68,9,0	1/1:11,0:11:9.01:113,9,0	1/1:11,0:10:9.03:115,9,0	1/1:7,0:7:3.01:47,3,0	1/1:6,0:4:12.04:153,12,0	1/1:7,0:7:3.01:48,3,0	0/0:8,0:5:0:0,0,0	1/1:9,0:9:8.79:103,9,0	0/0:11,0:11:0:0,0,1	1/1:16,0:13:2.75:21,3,0	1/1:8,0:8:2.94:18,3,0	1/1:7,0:5:15.05:185,15,0	1/1:5,0:5:0.47:1,0,0	./.
chr10	68347160	.	AGAG	A	1731.48	PASS	AB=1.000;AC=38;AF=0.731;AN=52;BaseQRankSum=-0.578;DP=214;FS=8.932;HRun=0;HaplotypeScore=36.5089;InbreedingCoeff=0.2449;MQ=35.85;MQ0=7;MQRankSum=-1.508;QD=9.84;ReadPosRankSum=1.113;VQSLOD=1.2656;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:17:2.94:33,3,0	1/1:6,0:6:9.03:115,9,0	./.	0/0:3,0:1:0:0,0,0	0/0:9,0:9:0:0,0,0	1/1:3,7:9:6.02:84,6,0	1/1:9,0:8:5.93:52,6,0	1/1:7,0:7:21.02:217,21,0	1/1:4,0:4:3.01:33,3,0	0/1:18,0:16:42.30:303,0,42	0/0:3,0:3:0:0,0,0	1/1:7,0:7:5.80:59,6,0	1/1:4,0:4:12.03:136,12,0	0/0:6,0:6:0:0,0,0	1/1:13,0:13:6.83:36,7,0	1/1:11,0:11:8.61:71,9,0	1/1:7,0:7:9.03:115,9,0	1/1:7,0:7:3.01:35,3,0	1/1:6,0:4:12.04:153,12,0	1/1:7,0:7:3.01:34,3,0	0/0:6,0:3:0:0,0,0	1/1:9,0:9:8.89:105,9,0	0/0:10,0:10:0:0,0,0	1/1:14,1:13:2.86:35,3,0	1/1:8,0:8:2.94:18,3,0	1/1:6,0:5:15.05:185,15,0	0/1:4,0:4:0:0,0,0	./.
chr10	68347162	.	AG	A	1705.33	PASS	AB=0.550;AC=40;AF=0.800;AN=50;DP=201;FS=0.000;HRun=2;HaplotypeScore=31.7621;InbreedingCoeff=0.2850;MQ=36.38;MQ0=6;QD=9.53;VQSLOD=1.1662;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,13:14:2.97:33,3,0	1/1:1,5:6:9.03:115,9,0	./.	0/0:3,0:1:0:0,0,0	0/1:3,6:9:0.01:0,0,0	1/1:8,0:8:5.94:43,6,0	1/1:9,0:8:3.86:23,4,0	1/1:7,0:7:21.02:216,21,0	1/1:4,0:4:3.01:33,3,0	1/1:18,0:16:41.66:394,42,0	0/0:3,0:3:0:0,0,0	1/1:0,7:7:5.91:61,6,0	1/1:0,4:4:12.03:137,12,0	0/0:0,6:6:0:0,0,0	1/1:13,0:13:6.47:35,6,0	1/1:11,0:11:6.45:49,6,0	1/1:0,6:6:9.03:115,9,0	1/1:7,0:7:3.01:30,3,0	1/1:1,5:4:12.04:153,12,0	1/1:7,0:7:2.98:21,3,0	0/0:2,3:3:0:0,0,0	1/1:0,9:9:8.96:106,9,0	0/1:0,9:9:0:0,0,0	1/1:9,2:11:2.81:16,3,0	1/1:8,0:8:2.94:18,3,0	1/1:2,4:5:15.05:184,15,0	./.	./.
chr10	68347163	.	G	GC	1390.93	PASS	AB=0.917;AC=38;AF=0.760;AN=50;BaseQRankSum=-2.739;DP=193;FS=0.000;HRun=0;HaplotypeScore=32.9982;InbreedingCoeff=0.3847;MQ=36.80;MQ0=5;MQRankSum=-1.791;QD=8.23;ReadPosRankSum=1.018;VQSLOD=2.9223;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:13:2.92:17,3,0	1/1:6,0:6:8.87:58,9,0	./.	0/0:3,0:1:0:0,0,0	0/1:8,0:8:0:0,0,0	1/1:8,0:8:3.06:9,3,0	0/0:9,0:8:1.98:0,2,6	1/1:0,7:7:21.07:307,21,0	1/1:0,2:4:3.01:45,3,0	1/1:1,14:14:42.14:624,42,0	0/1:0,3:3:0:0,0,0	1/1:7,0:7:5.75:29,6,0	1/1:4,0:4:11.65:67,12,0	0/1:6,0:6:0.01:0,0,0	1/1:13,0:13:2.29:6,2,0	0/1:11,0:11:1.22:5,0,1	1/1:6,0:6:8.87:58,9,0	1/1:7,0:7:2.80:13,3,0	1/1:6,0:4:11.65:67,12,0	0/0:7,0:7:2.04:0,2,6	0/1:5,0:3:0:0,0,0	1/1:9,0:9:8.79:52,9,0	0/1:9,0:9:0:0,0,0	1/1:3,0:9:1.24:3,1,0	1/1:8,0:8:1.55:4,2,0	1/1:4,1:5:14.64:112,15,0	./.	./.
chr10	68348488	.	T	TC	2079.68	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=7.415;DP=608;FS=12.441;HRun=2;HaplotypeScore=78.1396;InbreedingCoeff=0.9907;MQ=81.14;MQ0=0;MQRankSum=-1.210;QD=30.14;ReadPosRankSum=-2.699;VQSLOD=1.5604;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:66.21:0,66,855	0/0:7,0:7:18.06:0,18,234	0/0:14,0:14:35.75:0,36,381	0/0:21,0:21:45.93:0,46,508	0/0:34,0:34:99:0,99,1239	0/0:20,0:20:60.20:0,60,779	0/0:20,0:20:60.17:0,60,763	1/1:5,22:27:67.78:836,68,0	0/0:20,0:20:54.18:0,54,701	1/1:2,19:21:52.54:720,53,0	1/1:1,20:21:48.16:666,48,0	0/0:22,0:22:66.20:0,66,843	0/0:27,0:27:78.24:0,78,998	0/0:18,0:18:51.15:0,51,648	0/0:32,0:32:93.30:0,93,1208	0/0:26,0:26:60.19:0,60,779	0/0:26,0:26:72.23:0,72,935	0/0:17,0:17:48.16:0,48,623	0/0:25,0:25:72.23:0,72,934	0/0:27,0:27:78.25:0,78,1011	0/0:26,0:26:78.25:0,78,1008	0/0:10,0:10:27.09:0,27,350	0/0:20,0:20:60.17:0,60,750	0/0:16,0:16:48.11:0,48,604	0/0:10,0:10:27.07:0,27,334	0/0:42,0:42:99:0,126,1620	0/0:31,0:31:84.27:0,84,1089	0/0:5,0:5:15.05:0,15,195
chr10	68348546	.	CAAA	C	8087.90	PASS	AB=0.577;AC=36;AF=0.643;AN=56;BaseQRankSum=-1.847;DP=509;FS=12.035;HRun=12;HaplotypeScore=86.3444;InbreedingCoeff=0.8136;MQ=72.11;MQ0=3;MQRankSum=-3.462;QD=24.43;ReadPosRankSum=0.852;VQSLOD=2.5083;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:66.23:0,66,1302	1/1:0,8:8:18.04:227,18,0	0/0:30,0:19:30.67:0,31,356	0/0:18,1:9:13.56:0,14,139	0/0:18,0:20:27.06:0,27,458	1/1:2,15:17:45.13:569,45,0	1/1:4,10:14:27.05:341,27,0	1/1:6,26:32:77.97:947,78,0	1/1:3,12:15:30.07:379,30,0	0/1:6,0:21:14.96:15,0,18	0/0:8,0:20:16.70:0,17,55	1/1:1,12:13:30.09:379,30,0	0/0:23,0:23:45.15:0,45,831	1/1:3,9:12:24.07:303,24,0	1/1:7,12:19:30.05:379,30,0	1/1:2,17:19:36.10:455,36,0	1/1:4,18:23:46.71:604,47,0	0/0:1,0:15:14.95:0,15,32	1/1:8,11:19:33.05:401,33,0	1/1:6,14:20:39.09:492,39,0	1/1:5,6:11:12:152,12,0	1/1:1,9:10:24.05:303,24,0	0/0:18,0:18:45.12:0,45,787	0/0:4,0:4:3.48:0,3,60	1/1:4,18:22:51.13:644,51,0	1/1:5,23:30:66.35:866,66,0	1/1:7,15:22:42.11:531,42,0	0/1:1,3:4:10.91:102,0,11
chr10	68348970	.	C	CT	2016.99	PASS	AB=0.760;AC=32;AF=0.571;AN=56;BaseQRankSum=0.857;DP=512;FS=7.621;HRun=15;HaplotypeScore=73.4116;InbreedingCoeff=-0.0687;MQ=74.46;MQ0=6;MQRankSum=-1.298;QD=5.24;ReadPosRankSum=-2.522;VQSLOD=1.5317;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:35:54.59:0,55,324	1/1:4,3:8:5.15:70,5,0	0/0:35,1:19:0.20:0,0,47	0/1:28,0:10:4.72:5,0,27	0/0:16,0:20:32.27:0,32,174	1/1:2,12:15:8.80:172,9,0	1/1:2,3:6:8.90:66,9,0	0/1:25,2:28:9.86:10,0,59	0/1:6,13:19:23.11:146,0,23	0/1:12,4:16:2.09:86,0,2	0/1:16,0:17:8.30:74,0,8	0/1:7,8:15:9.02:41,0,9	0/0:17,0:17:24.24:0,24,146	1/1:3,4:8:11.83:90,12,0	0/1:5,6:11:18.73:39,0,19	0/1:8,5:13:31.52:52,0,32	0/1:9,16:26:23.66:137,0,24	0/1:9,15:25:17.25:135,0,17	1/1:13,11:24:8.30:242,8,0	1/1:5,9:14:2.59:94,3,0	1/1:3,5:8:5.99:51,6,0	0/1:4,3:7:12:19,0,12	0/1:12,1:14:8.53:9,0,60	0/0:17,0:18:28.33:0,28,167	1/1:9,8:20:2.25:124,2,0	0/1:13,7:21:8.37:132,0,8	0/1:22,7:29:48.33:240,0,48	1/1:5,5:12:20.66:154,21,0
chr10	68351017	.	AC	A	12691.77	PASS	AB=0.594;AC=31;AF=0.554;AN=56;BaseQRankSum=11.225;DP=855;FS=0.564;HRun=4;HaplotypeScore=80.2344;InbreedingCoeff=0.9247;MQ=61.23;MQ0=54;MQRankSum=3.952;QD=25.95;ReadPosRankSum=2.142;VQSLOD=3.7697;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:54:99:0,141,1966	1/1:1,9:9:27.08:322,27,0	0/0:23,0:20:57.19:0,57,790	0/0:20,0:17:45.10:0,45,580	0/0:33,0:32:96.32:0,96,1335	1/1:4,20:23:18.98:639,19,0	1/1:10,29:33:40.33:892,40,0	0/0:37,0:29:72.18:0,72,955	0/0:40,0:35:99:0,102,1409	0/0:36,0:35:99:0,99,1327	0/0:14,0:12:36.12:0,36,503	1/1:8,37:41:35.64:1010,36,0	0/0:24,0:22:63.21:0,63,880	1/1:8,22:25:60.18:720,60,0	1/1:12,37:43:30.18:1143,30,0	1/1:7,25:29:41.31:860,41,0	1/1:1,34:35:96.29:1152,96,0	0/0:22,0:21:54.18:0,54,755	0/1:6,13:19:74.20:418,0,74	1/1:4,21:23:47.03:715,47,0	1/1:18,53:63:77.09:1753,77,0	1/1:5,25:28:68.96:827,69,0	0/0:20,0:17:48.16:0,48,661	0/0:39,0:35:81.22:0,81,1077	1/1:6,15:17:45.14:540,45,0	1/1:6,16:18:16.48:515,16,0	1/1:1,26:27:75.23:899,75,0	1/1:2,8:10:24.07:288,24,0
chr10	68351765	.	G	GA	285.37	PASS	AC=28;AF=0.667;AN=42;BaseQRankSum=4.480;DP=182;FS=23.248;HRun=0;HaplotypeScore=23.5388;InbreedingCoeff=0.5862;MQ=87.47;MQ0=17;MQRankSum=-1.371;QD=6.96;ReadPosRankSum=-5.733;VQSLOD=0.7777;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:40:99:0,114,1570	./.	0/0:16,0:12:36.11:0,36,484	0/0:21,0:21:63.08:0,63,801	0/0:9,0:9:24.07:0,24,319	./.	1/1:1,4:4:3.01:33,3,0	1/1:3,0:2:3:27,3,0	1/1:2,0:1:3.01:41,3,0	./.	1/1:1,0:1:2.84:14,3,0	1/1:1,0:1:2.94:18,3,0	0/0:17,0:17:48.07:0,48,612	./.	./.	1/1:1,2:2:3.01:33,3,0	1/1:4,0:3:5.99:49,6,0	1/1:2,1:1:2.99:23,3,0	1/1:3,0:1:3:25,3,0	./.	1/1:3,5:5:3.01:38,3,0	1/1:2,0:2:5.96:47,6,0	0/0:12,0:11:30.09:0,30,404	0/0:21,0:21:57.15:0,57,775	1/1:0,2:2:2.90:16,3,0	1/1:2,0:1:3:29,3,0	1/1:2,0:2:5.95:43,6,0	./.
chr10	68354345	.	CCCT	C	200.82	PASS	AB=0.959;AC=16;AF=0.286;AN=56;BaseQRankSum=3.977;DP=334;FS=13.271;HRun=0;HaplotypeScore=117.9885;InbreedingCoeff=-0.3902;MQ=35.72;MQ0=7;MQRankSum=-2.812;QD=0.94;ReadPosRankSum=0.982;VQSLOD=1.4442;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:34.36:0,34,682	0/0:4,1:4:7.97:0,8,45	0/0:5,0:1:2.60:0,3,10	0/0:12,0:4:4.50:0,4,17	0/0:12,0:11:4.09:0,4,254	0/1:10,0:9:11.31:11,0,222	0/1:13,0:12:30.51:31,0,247	0/0:12,0:11:5.54:0,6,104	0/1:8,0:8:34.36:34,0,62	0/1:11,1:11:25.94:26,0,173	0/0:4,0:4:2.96:0,3,19	0/1:16,1:16:40.98:41,0,222	0/0:20,1:20:46.05:0,46,529	0/1:1,1:2:26.50:31,0,27	0/0:6,0:5:8.96:0,9,145	0/1:19,1:17:3.88:4,0,424	0/1:10,0:9:6.13:6,0,24	0/0:1,0:1:2.22:0,2,7	0/1:14,1:9:21.09:21,0,198	0/1:11,0:11:0.80:1,0,118	0/1:22,0:20:3.82:4,0,249	0/1:19,0:19:26.66:27,0,193	0/1:9,0:9:0.22:0,0,156	0/1:12,0:12:5.85:6,0,197	0/0:16,0:14:27.79:0,28,386	0/1:21,0:18:32.78:33,0,718	0/1:11,1:11:61.34:61,0,293	0/0:3,0:2:3:0,3,28
chr10	68354368	.	C	CT	1327.42	PASS	AB=0.920;AC=26;AF=0.481;AN=54;BaseQRankSum=9.071;DP=461;FS=53.058;HRun=0;HaplotypeScore=152.7013;InbreedingCoeff=-0.4107;MQ=43.85;MQ0=10;MQRankSum=-6.675;QD=3.63;ReadPosRankSum=3.994;VQSLOD=1.4069;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:29,2:31:71.92:72,0,588	1/1:4,1:5:11.27:97,11,0	0/0:21,0:4:6.38:0,6,71	0/0:27,0:10:3.75:0,4,106	0/0:11,2:12:1.01:0,1,260	0/1:14,1:14:74.13:74,0,124	0/1:22,1:22:52.70:53,0,316	0/0:15,0:13:2.96:0,3,22	1/1:13,3:15:20.37:121,20,0	1/1:11,1:12:2.31:76,2,0	1/1:5,1:6:6.28:35,6,0	0/1:17,5:22:97.05:97,0,176	0/1:22,2:23:99:111,0,216	0/1:9,0:8:29.34:62,0,29	0/1:12,0:11:17.98:18,0,144	0/1:14,3:20:99:147,0,111	0/1:10,1:11:32.36:67,0,32	0/1:6,0:6:1.87:2,0,2	0/1:16,2:14:69.47:69,0,264	0/1:10,2:11:28.07:28,0,84	0/1:32,2:31:8.31:8,0,358	0/1:15,2:17:84.70:85,0,113	0/1:7,1:8:6.21:6,0,178	0/0:16,2:18:15.49:0,15,250	0/1:17,0:16:28.79:29,0,292	0/1:23,1:20:99:128,0,250	0/1:14,3:16:93.52:94,0,243	./.
chr10	68354371	.	C	CT	2338.07	PASS	AB=0.900;AC=27;AF=0.500;AN=54;BaseQRankSum=8.039;DP=454;FS=40.388;HRun=0;HaplotypeScore=150.3874;InbreedingCoeff=-0.2259;MQ=44.26;MQ0=7;MQRankSum=-6.464;QD=6.60;ReadPosRankSum=3.478;VQSLOD=1.8874;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:28,4:32:99:114,0,610	1/1:4,1:5:9.03:121,9,0	0/0:21,0:4:9.75:0,10,81	0/0:28,0:11:15.18:0,15,127	0/0:12,0:11:2.86:0,3,269	0/1:15,0:14:75.94:76,0,123	0/1:20,4:23:99:202,0,332	1/1:12,1:11:5.98:66,6,0	1/1:6,7:15:11.07:181,11,0	1/1:7,6:12:14.46:240,14,0	1/1:2,2:5:8.24:90,8,0	0/1:23,0:22:97.65:98,0,168	0/1:24,0:23:99:138,0,216	0/1:10,0:8:29.13:64,0,29	0/0:12,0:11:1.21:0,1,151	0/1:18,1:17:99:138,0,128	0/1:10,2:11:25.47:57,0,25	1/1:2,4:6:13.86:177,14,0	0/1:15,2:14:99:103,0,256	0/1:10,2:10:62.29:87,0,62	0/1:30,6:33:39.20:39,0,336	0/1:13,4:17:99:172,0,112	0/0:8,0:9:12.87:0,13,193	0/0:16,1:17:18.08:0,18,264	0/1:12,3:15:86.64:87,0,293	0/1:18,2:18:99:150,0,248	0/1:15,0:16:99:106,0,258	./.
chr10	68354380	.	TCTC	T	978.90	PASS	AB=0.954;AC=19;AF=0.352;AN=54;BaseQRankSum=8.753;DP=459;FS=51.258;HRun=0;HaplotypeScore=167.6607;InbreedingCoeff=-0.4114;MQ=45.24;MQ0=10;MQRankSum=-6.372;QD=3.28;ReadPosRankSum=1.341;VQSLOD=1.2056;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,1:35:23.53:0,24,1335	0/0:7,0:7:2.46:0,2,25	0/0:27,0:7:12.61:0,13,214	0/0:26,0:13:12.10:0,12,191	0/0:13,0:12:5.78:0,6,424	0/1:15,0:13:4.75:5,0,152	0/1:21,0:20:5.24:5,0,282	0/0:7,0:4:1.73:0,2,42	0/1:17,0:15:44.99:45,0,117	0/1:13,1:13:78.22:138,0,78	1/1:5,0:5:8.17:35,8,0	0/1:18,2:18:99:117,0,152	0/1:23,2:22:62.73:63,0,444	0/1:8,3:9:20.45:170,0,20	0/0:13,2:12:17.21:0,17,162	0/1:19,0:16:48.90:49,0,172	0/1:10,2:11:57.45:57,0,142	0/0:8,0:8:18.53:0,19,382	0/1:18,0:13:83.28:83,0,205	0/1:8,0:7:42.24:42,0,52	0/1:32,1:31:87.04:87,0,259	0/1:16,0:15:2.76:3,0,90	0/1:10,0:10:11.70:12,0,318	0/0:18,0:18:8.41:0,8,378	0/1:14,2:16:59.99:60,0,125	0/1:19,1:16:99:100,0,178	0/1:16,0:15:59.11:59,0,177	./.
chr10	68354430	.	C	CTCT	4602.43	PASS	AB=0.850;AC=21;AF=0.375;AN=56;BaseQRankSum=6.501;DP=581;FS=4.649;HRun=0;HaplotypeScore=140.6534;InbreedingCoeff=-0.6169;MQ=40.15;MQ0=15;MQRankSum=-6.644;QD=10.70;ReadPosRankSum=2.848;VQSLOD=4.3761;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:37,6:42:99:294,0,1127	0/1:11,2:13:50.04:153,0,50	0/0:47,0:7:17.92:0,18,183	0/0:33,1:8:8.69:0,9,87	0/1:11,2:13:99:123,0,290	0/1:13,3:15:85.31:85,0,479	0/1:22,5:27:99:330,0,323	0/0:16,0:16:32.93:0,33,387	0/0:27,0:24:45.01:0,45,613	0/1:9,0:8:98.81:99,0,114	0/0:9,0:9:15.14:0,15,271	0/1:15,5:19:99:279,0,291	0/1:15,6:20:99:194,0,351	0/1:12,3:12:99:207,0,160	0/1:12,1:11:48.71:49,0,110	0/1:16,6:20:99:294,0,310	0/1:15,5:20:99:168,0,333	0/0:14,0:13:37.94:0,38,556	0/1:16,3:18:99:150,0,378	0/1:9,1:10:99:107,0,157	0/1:32,13:43:99:697,0,764	0/1:17,6:22:99:341,0,310	0/1:13,4:17:99:282,0,278	0/1:18,3:21:99:99,0,500	0/1:19,1:20:80.73:81,0,334	0/1:17,8:24:99:463,0,258	0/1:16,2:17:99:108,0,365	0/0:2,0:2:6:0,6,69
chr10	68354447	.	TTCC	T	500.20	PASS	AB=0.834;AC=3;AF=0.054;AN=56;BaseQRankSum=2.085;DP=670;FS=6.194;HRun=0;HaplotypeScore=148.6527;InbreedingCoeff=-0.0598;MQ=42.68;MQ0=27;MQRankSum=0.831;QD=4.81;ReadPosRankSum=1.521;VQSLOD=2.4848;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:45:99:0,105,1933	0/0:13,0:13:26.19:0,26,552	0/0:59,0:9:9.03:0,9,166	0/1:57,0:14:11.33:11,0,233	0/0:15,0:14:30.10:0,30,574	0/0:15,0:15:36.12:0,36,738	0/0:35,0:35:75.15:0,75,1284	0/0:16,0:14:23.82:0,24,409	0/1:22,9:29:99:301,0,427	0/0:15,0:13:32.54:0,33,653	0/0:10,0:9:17.55:0,18,321	0/0:26,0:25:67.11:0,67,1243	0/0:22,0:22:27.09:0,27,510	0/0:15,0:13:30.05:0,30,553	0/0:17,0:16:30.10:0,30,608	0/0:19,0:19:42.14:0,42,840	0/0:23,0:23:60.21:0,60,1178	0/1:9,6:16:31.38:285,0,31	0/0:22,0:18:39.02:0,39,576	0/0:13,0:13:36.08:0,36,594	0/0:53,0:51:99:0,114,2121	0/0:24,0:23:60.19:0,60,1051	0/0:22,0:22:57.19:0,57,1014	0/0:24,0:24:60.18:0,60,1130	0/0:19,0:17:46.66:0,47,793	0/0:23,0:22:60.19:0,60,1089	0/0:15,0:14:36.12:0,36,678	0/0:5,0:4:9.03:0,9,180
chr10	68354512	.	TCCC	T	487.33	PASS	AB=0.889;AC=6;AF=0.107;AN=56;BaseQRankSum=5.183;DP=650;FS=1.683;HRun=3;HaplotypeScore=108.1098;InbreedingCoeff=0.1110;MQ=40.59;MQ0=60;MQRankSum=-4.834;QD=4.73;ReadPosRankSum=-0.570;VQSLOD=-0.6437;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:76.76:0,77,1373	0/0:10,0:8:20.86:0,21,280	0/0:38,0:3:3.01:0,3,73	0/0:41,0:8:8.41:0,8,188	0/0:12,0:11:14.85:0,15,292	0/0:15,0:13:30.40:0,30,675	0/0:35,0:32:68.28:0,68,1088	0/1:32,5:22:99:185,0,311	0/1:21,1:20:99:101,0,409	0/1:25,2:18:74.41:74,0,696	1/1:4,2:5:3.01:54,3,0	0/0:20,0:18:47.95:0,48,870	0/0:13,0:11:27.05:0,27,579	0/0:20,0:16:26:0,26,683	0/0:27,0:24:65.80:0,66,1125	0/0:22,0:20:36.48:0,36,886	0/0:35,0:33:66:0,66,1739	0/1:8,3:11:99:192,0,168	0/0:25,0:12:14.31:0,14,342	0/0:13,0:11:26.95:0,27,431	0/0:44,0:42:96.09:0,96,1792	0/0:16,0:16:35.83:0,36,597	0/0:26,0:23:57.07:0,57,1124	0/0:29,0:29:72.18:0,72,1504	0/0:15,0:13:19.01:0,19,525	0/0:30,0:21:54.08:0,54,987	0/0:11,0:10:30.10:0,30,718	0/0:7,0:6:10.07:0,10,75
chr10	68354554	.	TC	T	324.15	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=6.741;DP=510;FS=19.042;HRun=6;HaplotypeScore=79.0975;InbreedingCoeff=0.5145;MQ=61.44;MQ0=11;MQRankSum=-3.798;QD=6.90;ReadPosRankSum=1.215;VQSLOD=0.0297;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,1:25:40.32:0,40,789	0/0:6,0:6:11.91:0,12,135	0/0:22,1:11:10.75:0,11,168	0/1:30,0:12:12.56:13,0,65	0/0:13,0:13:26.91:0,27,352	0/0:20,0:18:45.09:0,45,552	0/0:29,0:28:9.33:0,9,545	0/0:21,0:19:22.19:0,22,271	1/1:7,10:16:41.81:415,42,0	0/0:26,1:25:60.27:0,60,829	0/0:6,0:6:6.02:0,6,79	0/0:18,0:17:41.69:0,42,548	0/0:14,0:13:23.93:0,24,296	0/0:14,0:13:27.09:0,27,354	0/0:19,1:18:36.09:0,36,432	0/0:23,0:23:59.99:0,60,779	0/0:28,0:27:75.21:0,75,950	0/0:9,0:9:18.16:0,18,271	0/0:11,0:10:15.05:0,15,195	0/0:14,0:13:36.12:0,36,463	0/0:31,0:28:30.52:0,31,602	0/0:9,0:9:21.07:0,21,275	0/0:14,0:14:33.11:0,33,433	0/0:26,0:27:32.74:0,33,594	0/0:13,0:12:30.09:0,30,378	0/0:24,0:24:66.21:0,66,858	0/0:16,0:16:42.07:0,42,503	0/0:4,0:3:6.02:0,6,78
chr10	68354865	.	TCTC	T	463.51	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.713;DP=645;FS=12.052;HRun=0;HaplotypeScore=90.2228;InbreedingCoeff=0.8798;MQ=69.34;MQ0=3;MQRankSum=-1.113;QD=17.83;ReadPosRankSum=2.021;VQSLOD=2.4895;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,117,2264	0/0:8,0:8:18.06:0,18,345	0/0:26,0:19:14.83:0,15,226	0/0:30,0:21:16.17:0,16,172	0/0:24,0:24:63.09:0,63,1022	0/0:26,0:25:48.15:0,48,875	0/0:32,0:32:48.14:0,48,865	0/0:40,0:40:42.13:0,42,751	1/1:10,16:25:39.13:558,39,0	0/0:19,0:19:36.11:0,36,622	0/0:13,0:13:17.81:0,18,361	0/0:23,0:23:57.15:0,57,1074	0/0:14,0:14:36.12:0,36,681	0/0:24,0:24:60.19:0,60,1192	0/0:28,1:28:23.21:0,23,1118	0/0:36,0:36:90.17:0,90,1744	0/0:34,0:34:33.75:0,34,1204	0/0:4,0:10:12.04:0,12,150	0/0:13,0:13:18.05:0,18,306	0/0:9,0:9:15.05:0,15,280	0/0:38,0:38:81.09:0,81,1475	0/0:20,0:20:33.11:0,33,649	0/0:11,0:11:27.06:0,27,455	0/0:24,0:25:45.15:0,45,891	0/0:19,0:19:36.11:0,36,689	0/0:20,0:20:39.13:0,39,740	0/0:22,0:22:51.17:0,51,978	0/0:8,0:8:11.93:0,12,193
chr10	68356835	.	GATGA	G	351.21	PASS	AB=0.982;AC=13;AF=0.283;AN=46;BaseQRankSum=2.409;DP=342;FS=0.000;HRun=0;HaplotypeScore=61.5345;InbreedingCoeff=0.3845;MQ=24.95;MQ0=142;MQRankSum=-2.428;QD=4.04;ReadPosRankSum=1.181;VQSLOD=1.0060;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:11:3.01:0,3,39	0/0:2,0:2:3.01:0,3,87	./.	./.	0/1:12,0:11:0:0,0,0	0/0:14,0:10:3.01:0,3,87	0/0:15,0:6:2.99:0,3,86	0/1:9,1:2:7.85:50,0,8	1/1:2,7:8:8.98:145,9,0	1/1:3,10:11:9.84:233,10,0	1/1:2,5:7:2.97:20,3,0	0/0:7,0:6:3.01:0,3,86	0/0:12,0:10:9.50:0,9,206	0/1:7,0:7:0:0,0,0	0/1:11,0:9:0:0,0,0	0/0:6,0:4:3.01:0,3,87	0/0:11,0:6:5.75:0,6,98	1/1:2,4:4:2.98:22,3,0	0/0:15,0:10:30.06:0,30,612	0/0:7,0:7:6.02:0,6,173	./.	0/1:11,0:11:0:0,0,0	0/0:14,0:12:5.93:0,6,103	./.	0/0:6,0:6:2.98:0,3,86	0/0:15,1:14:39.13:0,39,865	0/0:9,0:5:6.02:0,6,73	./.
chr10	68356839	.	AGT	A	101.01	PASS	AB=0.938;AC=8;AF=0.211;AN=38;BaseQRankSum=3.081;DP=352;FS=3.411;HRun=0;HaplotypeScore=61.5682;InbreedingCoeff=0.0673;MQ=24.32;MQ0=155;MQRankSum=-0.992;QD=1.40;ReadPosRankSum=1.521;VQSLOD=1.4344;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:2,0:2:2.95:0,3,48	./.	./.	./.	0/0:13,0:9:3.01:0,3,49	0/0:16,0:4:3.01:0,3,49	1/1:10,0:2:2.50:9,2,0	1/1:10,0:8:8.42:40,8,0	0/1:14,0:13:11.85:49,0,12	./.	0/0:6,0:5:3.01:0,3,49	0/0:12,0:10:6.02:0,6,97	./.	./.	0/0:7,0:5:3.01:0,3,49	0/0:11,0:6:5.91:0,6,64	0/0:6,0:4:2.96:0,3,19	0/0:14,0:9:12.04:0,12,195	0/0:7,0:7:6.02:0,6,97	./.	0/1:12,0:12:0:0,0,0	0/0:13,0:12:3.01:0,3,49	./.	0/0:6,1:7:3.01:0,3,49	0/1:13,3:14:76.86:77,0,327	0/1:9,1:6:13.96:31,0,14	0/0:10,0:6:2.97:0,3,20
chr10	68356896	.	GACTC	G	112.55	PASS	AB=0.975;AC=10;AF=0.238;AN=42;BaseQRankSum=3.068;DP=412;FS=1.789;HRun=0;HaplotypeScore=67.8599;InbreedingCoeff=0.2289;MQ=20.63;MQ0=228;MQRankSum=-0.320;QD=1.22;ReadPosRankSum=-2.096;VQSLOD=1.1347;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	0/0:5,1:6:3.01:0,3,35	./.	./.	0/1:16,0:16:0:0,0,0	0/0:11,0:5:3.01:0,3,54	0/1:17,0:4:0:0,0,0	./.	0/0:4,0:2:3.01:0,3,37	0/1:9,3:12:99:160,0,430	0/1:6,0:6:0.05:0,0,0	1/1:6,0:2:2.96:19,3,0	0/0:8,0:5:9.87:0,10,132	0/1:6,0:4:0:0,0,0	0/1:13,0:8:0:0,0,0	./.	0/0:15,0:8:8.74:0,9,153	0/0:13,0:7:9.92:0,10,212	0/0:17,0:7:13.70:0,14,387	0/0:12,0:12:4.95:0,5,127	./.	0/1:6,0:6:0:0,0,0	0/0:11,0:11:3.90:0,4,85	./.	0/1:10,0:10:24.57:25,0,56	0/0:9,0:5:15.05:0,15,295	0/0:9,0:5:9.03:0,9,189	0/0:10,0:7:6.02:0,6,123
chr10	68356900	.	C	CTG	723.28	PASS	AB=0.781;AC=21;AF=0.700;AN=30;BaseQRankSum=-0.604;DP=426;FS=2.783;HRun=0;HaplotypeScore=63.6263;InbreedingCoeff=0.2022;MQ=21.25;MQ0=234;MQRankSum=-2.096;QD=5.17;ReadPosRankSum=-0.178;VQSLOD=2.4328;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	1/1:2,6:8:3.01:46,3,0	./.	./.	./.	./.	./.	./.	./.	1/1:12,0:12:10.80:114,11,0	0/1:6,0:6:0:0,0,0	0/1:3,3:2:0:0,0,0	0/0:8,0:5:2.84:0,3,14	./.	./.	./.	1/1:6,8:7:5.88:93,6,0	1/1:7,0:7:3.46:25,3,0	0/1:15,2:6:28.45:40,0,28	1/1:4,10:14:12.04:185,12,0	./.	0/1:3,4:8:0:0,0,0	0/0:9,0:11:2.88:0,3,20	./.	1/1:3,7:11:5.92:92,6,0	1/1:9,2:7:6:69,6,0	0/1:5,3:4:25.41:63,0,25	1/1:2,10:9:6.02:93,6,0
chr10	68357158	.	C	CT	1380.07	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=4.266;DP=479;FS=0.580;HRun=7;HaplotypeScore=56.5911;InbreedingCoeff=0.9831;MQ=75.87;MQ0=2;MQRankSum=-0.525;QD=24.64;ReadPosRankSum=-1.913;VQSLOD=3.2058;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:96.14:0,96,925	0/0:4,0:4:12.02:0,12,116	0/0:23,0:21:56.90:0,57,524	0/0:26,0:21:40.29:0,40,398	0/0:15,0:15:44.95:0,45,407	0/0:16,0:16:42.03:0,42,396	0/0:14,0:14:39:0,39,362	1/1:6,19:25:55.72:656,56,0	0/0:13,0:13:36.04:0,36,342	1/1:1,11:12:30.09:362,30,0	1/1:3,16:19:45.01:504,45,0	0/0:12,0:12:36.06:0,36,348	0/0:13,0:13:30.01:0,30,281	0/0:8,0:8:21.03:0,21,203	0/0:13,0:13:39.06:0,39,377	0/0:10,0:10:27.03:0,27,256	0/0:22,0:22:48.07:0,48,463	0/0:15,0:14:30.04:0,30,289	0/0:19,0:19:57.08:0,57,547	0/0:24,0:24:69.09:0,69,660	0/0:27,0:26:74.14:0,74,698	0/0:9,0:9:24.02:0,24,226	0/0:10,0:10:30.05:0,30,289	0/0:24,0:24:69.11:0,69,665	0/0:9,0:9:24.04:0,24,231	0/0:20,1:21:20.85:0,21,485	0/0:26,0:26:75.10:0,75,718	0/0:9,0:9:27.04:0,27,260
chr10	68358439	.	CGTGT	C	1990.55	PASS	AB=0.871;AC=31;AF=0.596;AN=52;BaseQRankSum=2.444;DP=664;FS=16.793;HRun=0;HaplotypeScore=117.9351;InbreedingCoeff=0.5982;MQ=64.53;MQ0=9;MQRankSum=-1.682;QD=5.20;ReadPosRankSum=2.205;VQSLOD=1.5091;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:44:54.48:0,54,881	1/1:5,3:8:5.98:66,6,0	./.	./.	0/0:26,0:28:35.83:0,36,641	1/1:17,0:19:2.53:110,3,0	1/1:21,4:27:9.03:140,9,0	0/1:29,1:30:20.94:21,0,49	0/0:14,0:19:12.04:0,12,182	0/0:27,0:27:28.81:0,29,461	0/0:18,0:17:21.05:0,21,319	1/1:15,5:20:9.03:140,9,0	0/0:16,0:16:18.04:0,18,321	1/1:14,1:19:9.02:102,9,0	1/1:28,7:36:15.04:214,15,0	1/1:18,4:24:15.51:196,16,0	1/1:18,4:23:12.03:168,12,0	0/0:16,0:28:21.05:0,21,291	1/1:15,0:15:2.04:6,2,0	0/1:18,1:20:27.28:120,0,27	1/1:27,2:28:5.76:93,6,0	0/1:18,1:28:38.69:39,0,100	0/0:21,0:22:20.79:0,21,345	0/0:26,0:29:44.89:0,45,765	1/1:14,7:21:6.02:93,6,0	1/1:16,1:18:9.01:102,9,0	1/1:23,6:29:18.06:280,18,0	1/1:10,4:15:6.21:291,6,0
chr10	68359802	.	GC	G	923.25	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.385;DP=381;FS=8.129;HRun=1;HaplotypeScore=41.8771;InbreedingCoeff=0.9595;MQ=67.34;MQ0=0;MQRankSum=0.458;QD=36.93;ReadPosRankSum=2.602;VQSLOD=3.4693;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:81.24:0,81,1267	0/0:5,0:5:15.05:0,15,240	0/0:25,0:23:66.22:0,66,1035	0/0:24,0:21:40.67:0,41,791	0/0:16,0:16:48.16:0,48,767	0/0:4,0:4:12.04:0,12,189	0/0:13,0:13:36.10:0,36,547	0/0:23,0:23:69.22:0,69,1079	1/1:0,13:13:39.13:545,39,0	0/0:12,0:12:36.12:0,36,576	0/0:15,0:15:45.15:0,45,718	0/0:11,0:11:33.11:0,33,526	0/0:11,0:11:33.10:0,33,503	0/0:8,0:8:24.07:0,24,361	0/0:9,0:9:27.09:0,27,432	0/0:15,0:15:39.60:0,40,623	0/0:26,0:26:63.21:0,63,996	1/1:0,12:12:36.12:500,36,0	0/0:15,0:15:45.15:0,45,719	0/0:11,0:11:33.11:0,33,524	0/0:12,0:12:33.11:0,33,528	0/0:15,0:15:39.13:0,39,623	0/0:7,0:7:21.07:0,21,336	0/0:17,0:17:48.16:0,48,767	0/0:5,0:5:15.05:0,15,240	0/0:13,0:13:39.13:0,39,623	0/0:9,0:9:24.08:0,24,373	0/0:7,0:7:18.06:0,18,288
chr10	68359860	.	G	GA	1136.06	PASS	AB=0.660;AC=31;AF=0.554;AN=56;BaseQRankSum=-2.057;DP=249;FS=0.000;HRun=11;HaplotypeScore=34.0988;InbreedingCoeff=0.4550;MQ=74.90;MQ0=12;MQRankSum=-1.278;QD=9.88;ReadPosRankSum=1.939;VQSLOD=1.4900;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,1:18:11.08:0,11,271	1/1:2,0:2:3.01:30,3,0	0/0:31,1:13:18.75:0,19,122	0/0:28,0:14:10.49:0,10,68	0/0:6,0:5:11.94:0,12,91	1/1:1,3:4:9.02:91,9,0	0/1:5,8:13:1.20:160,0,1	0/0:14,0:14:19.93:0,20,145	1/1:6,2:7:14.99:141,15,0	0/0:7,0:7:11.93:0,12,93	0/0:11,0:11:14.92:0,15,113	1/1:2,0:2:3.01:30,3,0	0/0:2,0:2:2.98:0,3,23	1/1:5,0:5:6.01:61,6,0	1/1:3,5:8:6.01:61,6,0	1/1:1,5:8:12.16:90,12,0	0/1:7,10:16:25.43:131,0,25	1/1:6,0:8:14.36:83,14,0	1/1:0,1:2:5.85:45,6,0	1/1:1,5:6:14.99:141,15,0	1/1:3,1:4:3.01:30,3,0	0/1:2,7:8:11.33:56,0,11	0/0:2,0:2:5.96:0,6,44	0/0:8,0:8:11.94:0,12,92	0/1:1,1:2:10.89:25,0,11	1/1:4,2:6:6.01:61,6,0	1/1:2,3:5:6.01:61,6,0	0/1:4,1:5:14.66:24,0,15
chr10	68360943	.	GCT	G	477.38	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.119;DP=528;FS=0.000;HRun=0;HaplotypeScore=65.2576;InbreedingCoeff=0.9360;MQ=76.68;MQ0=0;MQRankSum=-2.320;QD=34.10;ReadPosRankSum=-3.196;VQSLOD=4.2456;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,123,2293	0/0:10,0:10:24.06:0,24,415	0/0:9,0:9:26.96:0,27,449	0/0:15,0:15:41.62:0,42,659	0/0:16,0:16:48.14:0,48,864	0/0:17,0:17:48.16:0,48,879	0/0:28,0:28:84.29:0,84,1566	1/1:0,14:14:42.07:572,42,0	0/0:18,0:18:54.19:0,54,1011	0/0:24,0:24:66.23:0,66,1235	0/0:8,0:8:24.08:0,24,442	0/0:23,0:23:66.21:0,66,1194	0/0:15,0:15:45.15:0,45,842	0/0:17,0:17:48.16:0,48,899	0/0:12,0:12:36.12:0,36,674	0/0:20,0:20:60.21:0,60,1114	0/0:27,0:27:78.21:0,78,1412	0/0:35,0:35:99:0,105,1965	0/0:11,0:11:30.10:0,30,557	0/0:9,0:9:24.08:0,24,449	0/0:57,0:57:99:0,166,3038	0/0:10,0:10:30.10:0,30,562	0/0:9,0:9:27.09:0,27,503	0/0:29,0:29:87.30:0,87,1619	0/0:9,0:9:27.09:0,27,506	0/0:25,0:25:72.24:0,72,1316	0/0:17,0:17:51.17:0,51,942	0/0:3,0:3:9.03:0,9,168
chr10	68361490	.	ATGTGTGTGTG	A	1046.46	PASS	AB=1.000;AC=10;AF=0.179;AN=56;BaseQRankSum=5.426;DP=682;FS=11.796;HRun=0;HaplotypeScore=212.9324;InbreedingCoeff=0.2200;MQ=62.35;MQ0=8;MQRankSum=-5.751;QD=5.31;ReadPosRankSum=-0.619;VQSLOD=1.6069;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:75.18:0,75,2893	0/0:8,0:8:11.82:0,12,97	0/0:23,0:14:1.25:0,1,3	0/0:16,0:12:6.02:0,6,209	0/0:32,0:31:48.16:0,48,2256	0/1:16,0:16:0.90:1,0,304	0/0:28,0:27:42.08:0,42,872	0/0:27,0:27:12.01:0,12,171	1/1:4,13:17:24.08:718,24,0	0/0:25,0:25:48.16:0,48,1716	0/0:14,0:14:15.03:0,15,465	0/1:32,0:32:3.88:4,0,350	0/0:20,0:21:48.04:0,48,1726	0/0:17,0:16:0.41:0,0,191	0/0:31,0:31:22.66:0,23,378	0/0:25,0:25:23.72:0,24,249	0/1:29,0:29:15.81:16,0,255	1/1:14,9:22:11.83:359,12,0	0/1:30,0:29:15:15,0,280	0/0:25,0:24:1.73:0,2,154	0/0:48,0:46:26.60:0,27,463	0/1:20,0:20:13.94:14,0,96	0/0:14,0:14:30.10:0,30,1251	0/0:44,0:44:70.04:0,70,2923	0/0:22,0:22:8.91:0,9,76	0/1:30,0:29:61.06:61,0,569	0/0:13,0:13:20.74:0,21,204	0/0:12,0:12:8.89:0,9,60
chr10	68361524	.	GTGTGTGTT	G	3023.94	PASS	AB=0.978;AC=28;AF=0.500;AN=56;BaseQRankSum=6.701;DP=649;FS=14.200;HRun=0;HaplotypeScore=155.3289;InbreedingCoeff=0.1069;MQ=62.45;MQ0=12;MQRankSum=-6.983;QD=7.43;ReadPosRankSum=2.733;VQSLOD=1.9760;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:45:99:0,120,2887	1/1:4,0:4:8.94:66,9,0	0/0:37,0:25:71.99:0,72,703	0/0:35,0:26:57.41:0,57,717	0/0:23,0:22:54.11:0,54,2027	0/1:18,1:18:60.40:88,0,60	0/0:29,0:28:19.33:0,19,283	0/1:23,0:22:17.04:302,0,17	0/1:22,0:22:99:238,0,173	0/1:23,0:22:54.54:55,0,990	0/1:13,0:13:42.88:43,0,237	1/1:31,2:33:6.02:260,6,0	0/0:20,0:20:57.09:0,57,1399	1/1:19,0:18:11.99:102,12,0	1/1:23,1:24:22.09:271,22,0	0/1:26,0:26:1.45:126,0,1	0/1:25,2:27:24.62:208,0,25	0/1:25,0:23:83.73:84,0,276	1/1:7,13:19:20.16:382,20,0	1/1:18,1:19:5.53:194,6,0	0/1:36,0:35:13.89:14,0,57	0/1:11,1:12:15.27:99,0,15	0/0:16,0:16:45.07:0,45,1114	0/0:36,0:36:81.04:0,81,2522	1/1:16,0:16:5.99:50,6,0	0/1:26,2:27:21.23:516,0,21	0/1:13,0:13:7.92:86,0,8	1/1:5,0:5:3:25,3,0
chr10	68361526	.	GTGTGTT	G	5083.52	PASS	AB=1.000;AC=37;AF=0.661;AN=56;BaseQRankSum=5.372;DP=630;FS=7.590;HRun=0;HaplotypeScore=126.2543;InbreedingCoeff=0.4969;MQ=65.22;MQ0=11;MQRankSum=-6.275;QD=12.19;ReadPosRankSum=1.993;VQSLOD=3.5232;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,123,2225	1/1:4,0:4:5.98:90,6,0	0/0:37,0:25:74.55:0,75,719	0/0:37,0:28:60.49:0,60,726	0/0:23,0:22:37.26:0,37,1566	1/1:19,1:19:18.94:172,19,0	0/1:28,0:27:47.15:55,0,47	1/1:22,0:21:38.74:349,39,0	0/1:22,0:22:99:127,0,173	0/1:24,0:23:96.54:97,0,645	0/1:11,0:11:42.88:43,0,158	1/1:7,24:31:26.90:540,27,0	0/0:21,0:21:60:0,60,1015	1/1:4,12:15:10.59:214,11,0	1/1:5,18:23:24.25:556,24,0	1/1:2,23:25:17.85:416,18,0	1/1:6,20:26:14.85:259,15,0	0/1:26,0:24:25.18:25,0,294	1/1:18,1:18:38.90:409,39,0	1/1:2,16:18:21.03:421,21,0	1/1:9,25:33:2.15:20,2,0	1/1:3,8:11:5.86:120,6,0	0/0:15,0:15:39.01:0,39,814	0/0:36,0:36:84.18:0,84,2016	1/1:2,12:14:6.02:140,6,0	1/1:23,1:23:63.01:683,63,0	1/1:3,12:15:10.81:278,11,0	1/1:0,4:4:3.01:70,3,0
chr10	68361528	.	GTGTT	G	3577.42	PASS	AB=1.000;AC=35;AF=0.625;AN=56;BaseQRankSum=6.321;DP=603;FS=6.304;HRun=0;HaplotypeScore=110.2091;InbreedingCoeff=0.6487;MQ=69.01;MQ0=11;MQRankSum=-6.864;QD=10.68;ReadPosRankSum=1.603;VQSLOD=2.7250;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,104,1557	1/1:3,0:3:5.98:57,6,0	0/0:38,0:27:73.72:0,74,741	0/0:38,0:30:63.48:0,63,750	0/0:24,0:23:51.09:0,51,1162	1/1:4,16:19:21.07:355,21,0	1/1:8,20:27:9.45:129,9,0	1/1:20,0:19:47.85:420,48,0	0/1:22,0:22:20.04:20,0,178	0/1:25,0:24:99:133,0,263	0/1:11,0:11:42.88:43,0,80	1/1:29,0:29:23.94:297,24,0	0/0:20,0:20:41.92:0,42,633	1/1:13,0:13:9.03:111,9,0	1/1:20,0:20:21.28:292,21,0	1/1:24,0:24:17.81:219,18,0	1/1:23,0:23:14.89:165,15,0	0/0:27,0:25:27.44:0,27,325	1/1:17,0:16:35.90:321,36,0	1/1:17,0:17:18.06:223,18,0	0/0:29,0:28:0.94:0,1,2	1/1:10,0:10:5.52:73,6,0	0/0:13,0:13:36.01:0,36,604	0/0:35,0:35:75.18:0,75,1394	1/1:13,0:13:6.02:74,6,0	1/1:23,0:23:50.68:462,51,0	1/1:13,0:13:10.92:147,11,0	1/1:4,0:4:3.01:37,3,0
chr10	68361719	.	C	CTTGGGGTAGGGTCTTA	23995.17	PASS	AB=0.870;AC=51;AF=0.911;AN=56;BaseQRankSum=-5.791;DP=267;FS=2.044;HRun=0;HaplotypeScore=316.5583;InbreedingCoeff=-0.1265;MQ=54.80;MQ0=0;MQRankSum=0.174;QD=89.87;ReadPosRankSum=0.109;VQSLOD=4.2439;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:15:7.62:1087,8,0	1/1:9,0:9:23.18:855,23,0	0/1:2,0:5:14.59:312,0,15	0/1:5,1:8:25.64:444,0,26	1/1:22,0:22:53.82:2463,54,0	1/1:14,0:14:3.54:1331,4,0	1/1:15,0:15:22.39:852,22,0	1/1:11,0:11:27.09:1335,27,0	0/1:6,0:6:17.70:599,0,18	1/1:19,0:19:42.59:2111,43,0	1/1:5,0:5:15.04:549,15,0	1/1:9,0:9:24.54:902,25,0	1/1:8,0:8:22.92:511,23,0	1/1:8,0:8:2.63:543,3,0	1/1:4,0:4:6.02:397,6,0	0/1:7,0:7:4.44:249,0,4	1/1:3,0:3:8.98:257,9,0	1/1:6,0:6:18.02:630,18,0	1/1:3,0:3:9.03:326,9,0	1/1:8,0:8:17.03:838,17,0	1/1:14,0:14:32.94:1001,33,0	1/1:20,0:20:38.36:2081,38,0	1/1:9,0:9:27.01:1362,27,0	1/1:8,0:8:17.98:549,18,0	0/1:13,0:13:6.23:1141,0,6	1/1:10,0:9:11.50:596,11,0	1/1:5,0:5:14.03:288,14,0	1/1:3,0:3:2.48:386,2,0
chr10	68362467	.	GA	G	593.40	PASS	AB=0.900;AC=5;AF=0.089;AN=56;BaseQRankSum=6.130;DP=605;FS=5.981;HRun=9;HaplotypeScore=59.8261;InbreedingCoeff=0.8458;MQ=72.17;MQ0=0;MQRankSum=0.400;QD=13.49;ReadPosRankSum=2.815;VQSLOD=3.3850;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,123,1387	0/0:9,0:9:24.07:0,24,277	0/0:13,0:12:17.98:0,18,169	0/1:8,1:9:2.13:2,0,131	0/0:26,0:26:66.19:0,66,754	0/0:25,0:25:63.19:0,63,727	0/0:22,0:24:63.02:0,63,707	0/0:29,0:29:81.23:0,81,926	1/1:4,10:14:30.01:275,30,0	0/0:25,0:25:54.16:0,54,616	0/0:18,0:18:45.13:0,45,519	0/0:23,0:24:66.03:0,66,742	0/0:15,0:15:42.12:0,42,484	0/0:15,0:15:36.11:0,36,415	0/0:30,0:30:87.26:0,87,1004	0/0:19,1:20:17.67:0,18,457	0/0:20,0:20:48.13:0,48,543	1/1:4,17:21:48.02:439,48,0	0/0:13,0:13:33.10:0,33,378	0/0:25,0:25:69.16:0,69,774	0/0:28,0:28:75.22:0,75,864	0/0:19,0:19:48.14:0,48,554	0/0:25,1:26:41.72:0,42,715	0/0:16,0:16:48.13:0,48,544	0/0:22,0:22:63.17:0,63,709	0/0:25,0:25:60.17:0,60,684	0/0:31,0:31:84.23:0,84,957	0/0:17,0:17:44.89:0,45,476
chr10	68362780	.	C	CATTGATTG	14283.74	PASS	AB=0.964;AC=39;AF=0.696;AN=56;BaseQRankSum=7.531;DP=650;FS=1.409;HRun=0;HaplotypeScore=197.4586;InbreedingCoeff=0.7179;MQ=68.35;MQ0=0;MQRankSum=-11.270;QD=29.63;ReadPosRankSum=-2.521;VQSLOD=4.3674;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:45.15:0,45,1059	1/1:9,2:11:25.43:453,25,0	0/1:25,0:21:14.28:14,0,438	0/0:19,0:17:15.05:0,15,338	0/0:26,0:26:42.08:0,42,930	1/1:19,4:23:45.14:1117,45,0	1/1:12,9:21:4.26:61,4,0	0/0:38,0:38:60.20:0,60,1349	0/1:20,0:20:26.03:26,0,644	1/1:15,0:35:68.71:607,69,0	0/1:22,0:25:7.32:288,0,7	1/1:7,11:18:9.03:109,9,0	0/0:17,0:17:36.12:0,36,915	1/1:17,3:20:43.38:843,43,0	1/1:13,14:28:21.07:293,21,0	1/1:22,1:23:60.20:1301,60,0	1/1:8,9:17:18.95:522,19,0	1/1:16,0:17:15:162,15,0	1/1:17,7:24:30.08:1180,30,0	1/1:23,4:28:54.18:1071,54,0	1/1:9,7:16:10.76:70,11,0	1/1:25,3:28:49.39:865,49,0	0/0:22,0:22:36.12:0,36,915	0/0:24,0:24:57.20:0,57,1423	1/1:9,13:22:15.05:467,15,0	1/1:17,16:34:69.21:2390,69,0	1/1:27,3:30:43.39:1227,43,0	1/1:15,2:17:39.13:1217,39,0
chr10	68362809	.	A	ATATC	7402.14	PASS	AC=46;AF=0.885;AN=52;BaseQRankSum=-2.319;DP=633;FS=0.000;HRun=0;HaplotypeScore=179.0112;InbreedingCoeff=0.7726;MQ=55.66;MQ0=7;MQRankSum=-3.273;QD=13.99;ReadPosRankSum=-0.236;VQSLOD=4.4556;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:13,14:27:15.05:351,15,0	1/1:7,0:11:9.03:158,9,0	./.	./.	1/1:10,12:23:24.08:554,24,0	1/1:10,10:22:15.05:350,15,0	1/1:14,0:14:12.04:259,12,0	1/1:49,0:48:22.29:252,22,0	1/1:7,14:21:24.08:561,24,0	1/1:29,0:35:27.55:427,28,0	1/1:14,0:23:12.03:188,12,0	1/1:15,1:16:6.02:140,6,0	0/0:16,0:16:18.05:0,18,258	1/1:12,10:22:12.04:280,12,0	1/1:21,0:26:21.06:335,21,0	1/1:17,8:27:9.03:210,9,0	1/1:10,3:13:9.03:210,9,0	1/1:14,1:15:9.03:208,9,0	1/1:20,4:23:15.05:350,15,0	1/1:17,11:30:18.06:414,18,0	1/1:11,1:12:6.02:140,6,0	1/1:14,13:27:18.06:408,18,0	0/0:22,0:21:30.09:0,30,438	0/0:27,0:27:36.06:0,36,502	1/1:13,4:17:15.05:350,15,0	1/1:28,4:32:36.12:838,36,0	1/1:12,15:27:6.80:141,7,0	1/1:10,6:16:12.04:280,12,0
chr10	68362810	.	T	TTG	1621.12	PASS	AB=0.851;AC=13;AF=0.232;AN=56;BaseQRankSum=10.060;DP=631;FS=47.097;HRun=0;HaplotypeScore=182.0042;InbreedingCoeff=-0.3130;MQ=54.83;MQ0=7;MQRankSum=-8.758;QD=5.71;ReadPosRankSum=-6.645;VQSLOD=-0.2576;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:48.13:0,48,663	0/1:8,4:12:27.72:29,0,28	0/0:23,0:12:19.61:0,20,450	0/0:15,0:10:27.04:0,27,411	0/0:23,0:23:53.35:0,53,705	0/1:16,6:22:78.58:172,0,79	0/1:14,0:14:5.71:6,0,86	0/0:49,0:48:95.26:0,95,1828	0/0:20,1:21:25.10:0,25,490	0/0:35,0:35:77.26:0,77,1072	0/0:23,0:24:35.62:0,36,439	0/0:15,0:15:8.99:0,9,90	0/0:16,0:16:48.14:0,48,736	0/1:17,5:22:41.13:142,0,41	0/0:24,0:24:3.83:0,4,37	0/1:13,14:27:24.12:231,0,24	0/1:13,0:13:66.34:82,0,66	0/0:11,0:14:24.81:0,25,287	0/1:25,0:23:99:106,0,603	0/1:24,6:30:99:152,0,174	0/0:11,0:11:5.98:0,6,66	0/1:19,9:28:86.40:152,0,86	0/0:22,0:21:60.19:0,60,955	0/0:27,0:27:81.19:0,81,1251	0/1:16,0:16:41.96:42,0,106	0/1:32,0:32:99:244,0,573	0/1:19,8:27:21.94:221,0,22	0/1:9,7:16:61.30:193,0,61
chr10	68362815	.	ATC	A	186.73	PASS	AB=0.858;AC=8;AF=0.143;AN=56;BaseQRankSum=7.482;DP=627;FS=0.707;HRun=0;HaplotypeScore=178.6783;InbreedingCoeff=-0.1743;MQ=53.11;MQ0=9;MQRankSum=-5.565;QD=1.06;ReadPosRankSum=-2.151;VQSLOD=2.5253;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:51.14:0,51,704	0/1:9,3:12:8.59:9,0,161	0/0:18,0:7:17.95:0,18,210	0/0:13,0:8:20.98:0,21,245	0/0:23,0:23:54.16:0,54,743	0/1:17,4:21:3.33:3,0,234	0/0:16,0:16:18.06:0,18,291	0/0:44,0:43:99:0,124,1898	0/0:19,1:20:36.12:0,36,482	0/0:33,0:33:87.87:0,88,1185	0/0:25,1:26:46.85:0,47,516	0/0:16,0:16:15.05:0,15,237	0/0:15,0:15:40.19:0,40,687	0/0:16,5:21:10.91:0,11,193	0/0:28,0:28:30.10:0,30,445	0/1:14,12:26:13.11:13,0,106	0/1:15,0:15:27.92:28,0,179	0/0:11,3:14:26.81:0,27,333	0/1:25,0:23:46.42:46,0,605	0/0:25,5:30:35.22:0,35,392	0/0:11,0:11:6.02:0,6,79	0/0:20,8:28:29.22:0,29,330	0/0:25,0:24:66.21:0,66,1104	0/0:26,0:26:78.27:0,78,1365	0/0:16,0:16:0.90:0,1,181	0/1:32,0:31:76.80:77,0,779	0/1:21,6:27:73.42:73,0,214	0/1:11,7:18:65.28:65,0,297
chr10	68364363	.	T	TGGCCCGGTGGGCGAA	38429.07	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=-2.979;DP=456;FS=5.306;HRun=0;HaplotypeScore=184.8981;InbreedingCoeff=0.9306;MQ=81.68;MQ0=0;MQRankSum=-14.704;QD=120.09;ReadPosRankSum=1.600;VQSLOD=4.7226;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:74.99:0,75,2845	1/1:6,0:6:5.98:228,6,0	0/0:21,0:21:44.98:0,45,1405	0/0:18,0:18:45.03:0,45,1115	0/0:18,0:18:51.17:0,51,2065	1/1:16,0:16:36.12:2037,36,0	1/1:19,0:19:42.14:2596,42,0	1/1:23,0:23:54.19:2577,54,0	1/1:13,2:15:39.13:2414,39,0	1/1:20,0:20:39.13:1884,39,0	1/1:4,0:4:12:489,12,0	1/1:15,0:16:36.12:2325,36,0	0/0:15,0:15:39.13:0,39,1612	1/1:17,0:17:39.13:2160,39,0	1/1:19,1:21:54.19:3464,54,0	1/1:16,2:18:42.14:2731,42,0	1/1:24,1:27:63.22:4082,63,0	1/1:12,0:12:36.08:2141,36,0	1/1:12,0:12:30.10:1431,30,0	1/1:12,0:11:18.06:951,18,0	1/1:30,0:30:39.13:2359,39,0	1/1:7,0:7:12.04:619,12,0	0/0:12,0:12:33.10:0,33,1161	0/0:20,0:20:57.20:0,57,2499	1/1:4,0:4:5.80:191,6,0	1/1:12,0:12:21.07:1113,21,0	1/1:17,2:20:36.12:2225,36,0	1/1:9,0:9:6.02:412,6,0
chr10	68364367	.	C	CCGGTGGGCGAAGGCA	41356.30	PASS	AB=0.781;AC=32;AF=0.571;AN=56;BaseQRankSum=-7.599;DP=621;FS=73.798;HRun=0;HaplotypeScore=232.5873;InbreedingCoeff=0.2650;MQ=74.65;MQ0=0;MQRankSum=-16.130;QD=89.90;ReadPosRankSum=5.947;VQSLOD=1.7572;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,114,3345	0/1:3,1:6:19.78:235,0,20	0/0:18,0:18:48.16:0,48,1571	0/0:21,0:21:48.08:0,48,1189	0/0:25,0:25:71.82:0,72,2344	0/1:18,4:28:33.38:2136,0,33	1/1:17,1:31:22.13:2290,22,0	1/1:23,1:39:25.36:4575,25,0	1/1:7,7:17:39.13:2545,39,0	0/1:17,2:23:79.62:1950,0,80	0/1:6,2:9:15.98:506,0,16	1/1:12,3:19:20.21:2519,20,0	0/0:15,0:15:42.13:0,42,1688	1/1:17,4:26:9.31:2241,9,0	1/1:10,10:26:54.18:3714,54,0	1/1:7,7:21:42.14:2906,42,0	1/1:13,11:37:56.97:4039,57,0	1/1:6,6:13:36.08:2315,36,0	1/1:9,4:20:51.15:2435,51,0	0/1:12,3:17:50.23:978,0,50	0/1:26,3:38:43.18:1000,0,43	0/1:13,2:17:99:622,0,135	0/0:15,0:15:45.08:0,45,1330	0/0:22,0:22:60.20:0,60,2625	0/1:11,0:11:63.80:176,0,64	0/1:15,1:23:91.87:1395,0,92	1/1:14,4:26:36.12:2340,36,0	0/1:9,2:12:41.02:439,0,41
chr10	68364657	.	CT	C	246.29	PASS	AB=0.848;AC=5;AF=0.089;AN=56;BaseQRankSum=5.028;DP=469;FS=0.983;HRun=2;HaplotypeScore=61.2303;InbreedingCoeff=0.3963;MQ=71.66;MQ0=8;MQRankSum=-2.793;QD=3.57;ReadPosRankSum=1.820;VQSLOD=0.4039;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:87.24:0,87,1226	0/0:5,0:5:14.87:0,15,132	0/0:20,0:6:8.93:0,9,82	0/1:30,0:13:8.75:9,0,259	0/0:23,0:23:63.20:0,63,914	0/0:19,0:19:35.99:0,36,374	0/0:18,0:18:20.96:0,21,202	0/0:26,0:26:60.20:0,60,893	1/1:0,8:8:17.85:187,18,0	0/0:19,0:19:45.14:0,45,646	0/0:8,0:8:24.07:0,24,334	0/0:13,0:13:29.97:0,30,303	0/0:8,0:8:21.06:0,21,291	0/0:6,0:6:6.02:0,6,74	0/0:14,0:14:20.39:0,20,225	0/1:13,0:13:20.83:21,0,111	0/0:39,0:39:82.47:0,82,836	0/1:3,15:15:1.67:148,0,2	0/0:36,0:36:95.80:0,96,1034	0/0:8,0:8:23.98:0,24,231	0/0:12,0:12:18.06:0,18,247	0/0:11,0:11:26.72:0,27,265	0/0:14,0:14:33.11:0,33,491	0/0:10,0:10:27.09:0,27,387	0/0:6,0:6:2.99:0,3,24	0/0:15,0:15:35.89:0,36,397	0/0:19,0:18:41.05:0,41,359	0/0:12,0:12:14.85:0,15,113
chr10	68364660	.	CT	C	1952.75	PASS	AB=0.857;AC=31;AF=0.554;AN=56;BaseQRankSum=0.632;DP=488;FS=1.640;HRun=12;HaplotypeScore=56.8281;InbreedingCoeff=0.5615;MQ=68.43;MQ0=10;MQRankSum=1.919;QD=6.69;ReadPosRankSum=3.210;VQSLOD=1.9382;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,1:39:74.15:0,74,693	1/1:1,4:5:11.95:93,12,0	0/0:24,1:6:7.06:0,7,35	0/1:31,0:12:5.55:6,0,9	0/0:20,0:24:53.44:0,53,511	0/1:4,15:19:4.72:139,0,5	1/1:3,13:17:13.97:99,14,0	0/0:25,0:25:46.47:0,46,393	0/0:10,0:10:7.28:0,7,41	0/0:17,0:17:39.01:0,39,362	0/0:9,0:9:18:0,18,170	1/1:2,8:10:12.42:112,12,0	0/1:9,0:9:9.38:9,0,83	1/1:2,7:9:2.98:23,3,0	1/1:5,10:15:11.91:92,12,0	1/1:4,10:14:8.94:70,9,0	1/1:11,30:41:53.73:417,54,0	0/0:18,0:15:16.41:0,16,77	1/1:13,20:34:32.43:407,32,0	1/1:2,8:10:17.83:130,18,0	0/1:11,0:11:17.05:17,0,18	1/1:3,8:11:13.75:97,14,0	0/0:14,0:14:30.05:0,30,299	0/0:13,1:14:3.80:0,4,214	1/1:0,7:7:2.97:23,3,0	0/1:10,6:15:80.07:109,0,80	1/1:5,14:21:30.87:217,31,0	1/1:0,11:11:11.95:93,12,0
chr10	68365197	.	G	GA	3807.84	PASS	AB=0.854;AC=33;AF=0.589;AN=56;BaseQRankSum=6.600;DP=508;FS=7.446;HRun=10;HaplotypeScore=96.2441;InbreedingCoeff=0.2633;MQ=47.27;MQ0=12;MQRankSum=-1.360;QD=10.29;ReadPosRankSum=-2.405;VQSLOD=2.2252;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,1:32:36.76:0,37,495	0/1:3,1:4:18.23:26,0,18	0/1:13,0:4:0.55:3,0,1	0/1:8,0:4:2.57:3,0,16	0/0:24,0:24:37.53:0,38,299	1/1:5,16:21:22.96:356,23,0	0/1:7,8:16:0.43:172,0,0	0/0:25,0:24:30.44:0,30,267	0/1:19,0:20:57.45:57,0,58	0/1:23,0:21:3.04:3,0,47	0/1:15,0:15:38.38:38,0,64	1/1:8,8:16:17.95:155,18,0	0/0:19,0:20:31.38:0,31,247	1/1:5,4:10:11.14:146,11,0	1/1:7,11:16:5.48:247,5,0	1/1:7,10:17:29.93:282,30,0	0/1:9,17:26:46.36:162,0,46	0/0:11,0:11:8.96:0,9,74	1/1:10,8:18:1.53:230,2,0	1/1:4,18:22:41.94:390,42,0	0/1:6,2:7:18.22:25,0,18	1/1:7,11:19:17.65:204,18,0	0/1:9,1:10:7.02:7,0,147	0/0:24,0:22:53.91:0,54,443	1/1:7,23:30:14.84:539,15,0	0/1:12,15:25:24.38:356,0,24	1/1:11,10:20:8.54:280,9,0	1/1:3,4:7:12.03:127,12,0
chr10	68365829	.	GA	G	16562.44	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=11.897;DP=705;FS=1.203;HRun=1;HaplotypeScore=71.4268;InbreedingCoeff=0.9980;MQ=88.35;MQ0=0;MQRankSum=-5.743;QD=40.10;ReadPosRankSum=2.748;VQSLOD=5.5743;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,144,2258	1/1:0,18:18:51.17:712,51,0	0/0:27,0:27:81.26:0,81,1256	0/0:24,0:24:69.20:0,69,1062	0/0:17,0:17:51.17:0,51,815	1/1:0,26:26:72.24:1007,72,0	1/1:0,24:24:66.22:923,66,0	1/1:0,34:34:99:1409,102,0	0/0:19,1:20:18.23:0,18,846	0/0:31,0:31:93.32:0,93,1480	0/0:24,0:24:72.22:0,72,1103	1/1:0,18:18:48.16:670,48,0	0/0:18,0:18:54.18:0,54,863	1/1:0,19:19:54.18:754,54,0	1/1:0,28:28:84.28:1174,84,0	1/1:0,35:35:99:1426,102,0	1/1:0,34:34:96.32:1342,96,0	0/0:22,0:22:66.23:0,66,1053	1/1:0,20:20:60.18:820,60,0	1/1:0,31:31:93.31:1297,93,0	1/1:0,38:38:99:1552,111,0	1/1:0,21:21:57.19:797,57,0	0/0:19,0:19:57.19:0,57,908	0/0:42,0:42:99:0,126,1991	1/1:0,19:19:57.19:797,57,0	1/1:1,23:24:24.25:917,24,0	1/1:0,17:17:48.16:671,48,0	1/1:0,7:7:21.07:294,21,0
chr10	68366258	.	TTGTATGTA	T	6011.26	PASS	AC=34;AF=0.739;AN=46;BaseQRankSum=7.777;DP=823;FS=2.704;HRun=0;HaplotypeScore=272.9622;InbreedingCoeff=0.7551;MQ=68.88;MQ0=2;MQRankSum=-7.242;QD=12.39;ReadPosRankSum=-2.636;VQSLOD=3.4455;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:48.14:0,48,1556	1/1:10,13:23:5.79:148,6,0	./.	./.	0/0:9,0:28:29.79:0,30,1012	1/1:11,23:34:12.04:281,12,0	./.	0/0:25,0:39:2.92:0,3,20	1/1:11,16:27:18.06:446,18,0	1/1:12,13:26:45.14:1015,45,0	1/1:12,10:22:2.97:20,3,0	1/1:19,20:39:9.03:223,9,0	0/0:31,0:31:60.21:0,60,2277	1/1:12,20:32:12.04:282,12,0	1/1:15,18:33:18.06:446,18,0	1/1:23,26:49:17.96:446,18,0	./.	1/1:9,0:21:6.02:112,6,0	1/1:15,5:20:14.97:239,15,0	1/1:9,19:27:8.96:92,9,0	./.	1/1:9,15:24:5.81:148,6,0	0/0:21,0:21:57.20:0,57,2128	0/0:26,0:26:30.10:0,30,975	1/1:13,16:29:6.02:149,6,0	1/1:11,22:33:66.17:1375,66,0	1/1:19,19:38:20.94:520,21,0	1/1:6,1:6:1.06:71,1,0
chr10	68367160	.	C	CT	379	PASS	AB=1.000;AC=10;AF=0.179;AN=56;BaseQRankSum=3.720;DP=426;FS=20.116;HRun=11;HaplotypeScore=72.0660;InbreedingCoeff=0.5016;MQ=60.83;MQ0=2;MQRankSum=-2.305;QD=4.62;ReadPosRankSum=-0.450;VQSLOD=0.1641;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:32:55.30:0,55,457	0/1:7,0:7:2.33:2,0,56	0/0:7,1:5:2.94:0,3,20	0/0:5,0:5:8.90:0,9,63	0/0:20,0:22:45.18:0,45,335	0/1:17,0:17:4.63:5,0,176	0/0:7,0:9:19.01:0,19,128	0/0:34,0:35:61.72:0,62,470	1/1:3,0:8:11.36:57,11,0	1/1:5,9:14:21.01:204,21,0	1/1:3,11:14:6.77:240,7,0	0/0:14,0:14:35.85:0,36,276	0/0:5,0:5:14.94:0,15,116	0/1:8,0:8:0.50:0,0,58	0/0:11,0:11:20.91:0,21,162	0/0:14,0:14:31.69:0,32,272	0/0:27,0:27:59.74:0,60,465	0/1:6,0:13:8.39:8,0,32	0/0:18,0:17:17.12:0,17,195	0/0:20,0:20:22.35:0,22,282	0/0:11,0:11:14.91:0,15,116	0/0:11,0:11:11.90:0,12,91	0/0:10,0:10:17.91:0,18,139	0/0:3,0:3:5.98:0,6,46	0/0:16,0:16:13.96:0,14,291	0/0:24,0:24:42.70:0,43,418	0/0:16,0:16:23.51:0,24,243	0/0:31,0:31:75.13:0,75,583
chr10	68367174	.	A	AAT	129.09	PASS	AB=0.886;AC=6;AF=0.107;AN=56;BaseQRankSum=5.531;DP=387;FS=46.686;HRun=0;HaplotypeScore=63.3574;InbreedingCoeff=-0.1311;MQ=52.21;MQ0=2;MQRankSum=-4.915;QD=1.68;ReadPosRankSum=1.511;VQSLOD=-0.1092;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:77.04:0,77,1175	0/1:4,2:6:99:100,0,149	0/0:8,0:4:9.03:0,9,129	0/0:3,0:2:5.99:0,6,49	0/0:24,0:24:69.21:0,69,1079	0/1:14,1:15:17.21:17,0,551	0/0:8,0:8:21.07:0,21,341	0/0:31,0:31:93.31:0,93,1555	0/0:6,0:6:11.91:0,12,160	0/0:13,0:13:36.11:0,36,565	0/0:14,0:14:35.95:0,36,552	0/0:15,0:15:45.10:0,45,700	0/0:5,0:5:15.05:0,15,229	0/1:5,1:6:40.78:41,0,225	0/0:11,0:11:27.08:0,27,416	0/0:12,0:12:32.90:0,33,537	0/0:22,0:22:63.21:0,63,1024	0/0:12,0:11:30.01:0,30,408	0/1:18,1:16:20.82:21,0,538	0/0:16,0:16:24.24:0,24,626	0/0:5,0:5:15.05:0,15,245	0/0:4,0:4:12.04:0,12,176	0/0:6,0:6:18.05:0,18,270	0/0:5,0:5:12.04:0,12,192	0/1:15,1:16:11:11,0,650	0/0:26,1:27:20.90:0,21,1128	0/1:13,2:15:61.85:62,0,575	0/0:30,2:31:31.48:0,31,1351
chr10	68367188	.	T	TCA	156.08	PASS	AB=0.879;AC=7;AF=0.125;AN=56;BaseQRankSum=5.345;DP=358;FS=38.335;HRun=0;HaplotypeScore=58.7566;InbreedingCoeff=-0.1606;MQ=50.55;MQ0=0;MQRankSum=-4.424;QD=1.90;ReadPosRankSum=2.180;VQSLOD=-0.2809;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:69.23:0,69,1100	0/1:3,2:5:85.84:101,0,86	0/0:6,0:2:6.02:0,6,98	0/0:5,0:3:6.02:0,6,96	0/0:22,0:22:66.21:0,66,1050	0/1:15,1:16:8.97:9,0,630	0/0:8,0:8:24.03:0,24,328	0/0:26,0:26:72.25:0,72,1239	0/0:5,0:5:12.04:0,12,186	0/0:15,0:15:45.15:0,45,734	0/0:14,0:14:39.09:0,39,607	0/0:14,0:14:39.13:0,39,628	0/0:6,0:6:18.06:0,18,285	0/1:4,1:5:41.85:42,0,181	0/0:11,0:11:33.11:0,33,538	0/0:12,0:12:35.91:0,36,551	0/0:19,0:19:57.18:0,57,900	0/1:7,1:7:38.49:38,0,272	0/1:16,1:15:19.58:20,0,526	0/0:14,0:14:42.09:0,42,632	0/0:5,0:5:15.04:0,15,221	0/0:1,0:1:3.01:0,3,49	0/0:8,0:8:24.07:0,24,367	0/0:5,0:5:12.04:0,12,196	0/1:13,1:14:14.75:15,0,588	0/0:23,0:23:66.23:0,66,1070	0/1:15,2:17:58.73:59,0,648	0/0:29,2:30:30.11:0,30,1252
chr10	68367209	.	A	ATATC	1429.33	PASS	AB=0.936;AC=9;AF=0.167;AN=54;BaseQRankSum=-2.155;DP=388;FS=13.363;HRun=0;HaplotypeScore=71.4418;InbreedingCoeff=0.0463;MQ=48.78;MQ0=14;MQRankSum=-4.734;QD=14.01;ReadPosRankSum=-3.450;VQSLOD=1.1475;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:48.16:0,48,921	0/1:5,0:5:51.82:52,0,167	0/0:29,0:17:48.05:0,48,810	0/0:28,0:9:18.06:0,18,350	0/0:20,0:20:57.20:0,57,1136	0/1:15,0:16:26.75:27,0,587	0/0:11,0:11:30.10:0,30,596	1/1:6,16:22:63.03:1296,63,0	./.	0/0:15,0:14:42.12:0,42,800	0/0:12,0:12:36.10:0,36,650	0/0:10,0:8:24.08:0,24,478	0/0:9,0:9:27.09:0,27,538	0/1:7,0:8:42.91:43,0,337	0/0:19,0:18:39.13:0,39,756	0/0:13,0:12:30.10:0,30,568	0/1:16,0:14:31.99:32,0,487	0/1:4,0:3:50.76:76,0,51	0/1:15,0:16:17.36:17,0,776	0/0:13,0:13:33.10:0,33,612	0/0:7,0:6:18.04:0,18,323	0/0:1,0:1:3.01:0,3,60	0/0:14,0:14:42.13:0,42,791	0/0:6,0:6:11.94:0,12,159	0/1:11,0:12:30.76:31,0,530	0/0:21,0:21:60.19:0,60,1150	0/0:17,0:17:36.12:0,36,685	0/0:18,0:18:45.13:0,45,859
chr10	68367313	.	CG	C	3701.83	PASS	AB=0.833;AC=31;AF=0.574;AN=54;BaseQRankSum=11.502;DP=295;FS=1.778;HRun=3;HaplotypeScore=58.0145;InbreedingCoeff=0.7886;MQ=37.61;MQ0=21;MQRankSum=-7.639;QD=24.35;ReadPosRankSum=1.229;VQSLOD=2.9146;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,1:31:69.23:0,69,978	1/1:0,3:2:6.02:74,6,0	0/0:4,0:2:6.02:0,6,86	0/0:3,0:2:6.02:0,6,78	0/0:14,0:12:30.09:0,30,412	1/1:2,21:17:42.13:520,42,0	./.	0/0:12,1:4:12:0,12,149	0/1:4,1:5:25.10:25,0,117	0/0:10,0:10:30.09:0,30,414	0/0:7,0:7:21.07:0,21,294	1/1:0,8:7:21.07:260,21,0	0/0:6,0:6:12.04:0,12,167	1/1:0,4:3:6.02:74,6,0	1/1:2,6:5:6.02:74,6,0	1/1:0,9:7:18.06:223,18,0	1/1:3,6:2:6.02:74,6,0	0/0:15,0:12:27.09:0,27,388	1/1:2,10:9:24.08:297,24,0	1/1:0,18:13:39.12:483,39,0	1/1:3,5:5:12.04:149,12,0	1/1:0,4:4:12.04:149,12,0	0/0:11,0:10:24.07:0,24,327	0/0:22,0:20:36.12:0,36,518	1/1:0,11:10:27.08:334,27,0	1/1:0,11:10:30.09:372,30,0	1/1:1,17:16:45.14:557,45,0	1/1:0,1:1:3.01:37,3,0
chr10	68367374	.	T	TC	1364.55	PASS	AB=0.879;AC=30;AF=0.556;AN=54;BaseQRankSum=8.901;DP=294;FS=17.456;HRun=0;HaplotypeScore=63.9238;InbreedingCoeff=0.6075;MQ=54.64;MQ0=7;MQRankSum=-9.294;QD=9.35;ReadPosRankSum=0.911;VQSLOD=1.8734;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:78.20:0,78,1035	1/1:4,1:5:11.62:72,12,0	0/0:18,0:11:32.94:0,33,411	0/0:7,0:3:3.01:0,3,42	0/0:11,0:11:29.94:0,30,356	1/1:12,0:12:12.43:158,12,0	1/1:2,0:2:2.94:18,3,0	0/1:24,1:21:65.48:203,0,65	0/1:4,0:4:13.91:14,0,15	0/0:7,0:7:14.61:0,15,85	0/0:11,0:11:29.45:0,29,187	1/1:4,0:4:11.82:79,12,0	0/0:10,0:10:27.05:0,27,354	1/1:5,0:3:5.87:36,6,0	1/1:6,0:5:11.73:70,12,0	1/1:3,0:3:8.80:53,9,0	1/1:11,0:8:13.32:76,13,0	0/0:16,0:16:36.08:0,36,466	0/1:7,1:8:3.03:95,0,3	1/1:14,1:14:18.09:184,18,0	./.	1/1:3,2:5:8.32:39,8,0	0/0:4,0:4:12.04:0,12,168	0/0:31,0:30:66.21:0,66,906	1/1:8,2:9:0.33:76,0,0	1/1:14,1:13:14.46:230,14,0	1/1:7,1:6:15.94:97,16,0	0/1:4,4:6:1.63:58,0,2
chr10	68367379	.	TGG	T	2177.39	PASS	AB=0.731;AC=26;AF=0.464;AN=56;BaseQRankSum=10.912;DP=293;FS=13.348;HRun=2;HaplotypeScore=56.7173;InbreedingCoeff=-0.0440;MQ=54.44;MQ0=9;MQRankSum=-8.687;QD=12.37;ReadPosRankSum=2.723;VQSLOD=-0.7640;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:26:72.25:0,72,1308	0/1:2,2:4:27.40:53,0,27	0/1:17,0:11:12.68:13,0,411	0/0:7,0:3:6:0,6,68	0/0:12,0:12:33.11:0,33,570	0/1:3,9:11:55.31:294,0,55	0/1:1,1:2:31.73:33,0,32	0/1:14,4:16:99:169,0,286	0/1:3,3:6:31.25:54,0,31	0/1:6,0:5:5.28:5,0,59	0/1:9,1:11:99:106,0,192	1/1:3,1:3:8.97:84,9,0	0/0:13,0:13:33.11:0,33,582	1/1:5,0:3:5.99:61,6,0	1/1:5,2:6:8.98:82,9,0	1/1:3,0:3:8.39:88,8,0	1/1:7,3:8:14.89:138,15,0	0/0:16,0:15:36.12:0,36,653	0/1:6,1:8:47.34:153,0,47	0/1:5,7:13:0.82:317,0,1	0/0:5,0:3:3.01:0,3,38	0/1:4,3:7:24.13:60,0,24	0/0:4,0:4:12.04:0,12,220	0/0:32,0:31:70.79:0,71,1240	0/1:4,5:8:36.21:136,0,36	0/1:8,6:13:40.18:310,0,40	1/1:5,2:5:8.96:94,9,0	0/1:3,5:6:25.24:103,0,25
chr10	68367741	.	GT	G	13089.69	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=13.270;DP=739;FS=0.891;HRun=4;HaplotypeScore=75.6438;InbreedingCoeff=0.9999;MQ=61.78;MQ0=1;MQRankSum=1.809;QD=30.94;ReadPosRankSum=2.756;VQSLOD=5.3105;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,132,1790	1/1:0,14:14:39.12:468,39,0	0/0:16,0:13:36.04:0,36,428	0/0:21,0:17:45.14:0,45,594	0/0:32,0:32:90.29:0,90,1244	1/1:1,22:23:57.17:683,57,0	1/1:0,23:23:54.17:646,54,0	0/0:24,0:24:69.18:0,69,926	0/0:30,0:30:87.28:0,87,1200	0/0:31,0:31:87.29:0,87,1218	0/0:22,0:22:60.20:0,60,839	1/1:2,25:27:69.21:827,69,0	0/0:24,0:24:72.19:0,72,969	1/1:0,17:17:45.14:540,45,0	1/1:1,44:45:99:1368,114,0	1/1:0,32:32:78.24:936,78,0	1/1:1,22:23:63.19:756,63,0	0/0:18,0:17:42.05:0,42,540	1/1:3,18:21:51.13:588,51,0	1/1:2,26:28:72.22:862,72,0	1/1:0,43:43:99:1511,126,0	1/1:1,25:26:66.16:775,66,0	0/0:25,0:25:75.25:0,75,1041	0/0:28,0:28:78.18:0,78,1050	1/1:2,23:25:60.18:719,60,0	1/1:1,41:42:84.34:1418,84,0	1/1:1,22:23:54.15:634,54,0	1/1:0,11:11:30.09:360,30,0
chr10	68368607	.	TTTTTG	T	2902.40	PASS	AB=0.987;AC=22;AF=0.393;AN=56;BaseQRankSum=0.908;DP=647;FS=0.343;HRun=0;HaplotypeScore=162.4102;InbreedingCoeff=0.0325;MQ=70.33;MQ0=0;MQRankSum=-2.629;QD=7.50;ReadPosRankSum=1.632;VQSLOD=2.8028;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,103,2346	0/1:17,0:17:13.41:87,0,13	0/0:22,0:18:48.23:0,48,569	0/1:18,0:16:2.65:3,0,159	0/0:30,0:30:83.84:0,84,1469	0/1:22,1:23:48.03:164,0,48	1/1:22,0:22:42.78:353,43,0	0/0:33,0:33:79.32:0,79,1229	0/0:26,0:26:75.20:0,75,1694	1/1:18,4:22:44.34:541,44,0	1/1:4,11:15:21.39:177,21,0	0/0:18,0:17:12.14:0,12,155	0/0:26,0:26:70.49:0,70,1391	0/1:15,0:13:21.81:22,0,97	0/1:32,0:32:40.83:205,0,41	1/1:21,1:21:12.73:247,13,0	0/1:24,0:24:29.32:103,0,29	0/0:14,0:14:21.98:0,22,432	0/1:22,0:22:55.30:55,0,125	0/1:33,0:33:99:151,0,112	0/1:20,0:20:39.97:182,0,40	0/1:30,0:29:0.29:257,0,0	0/0:25,0:25:63.19:0,63,1541	0/0:28,0:28:81.21:0,81,1755	0/1:12,1:13:25.41:64,0,25	0/1:27,2:27:29.75:269,0,30	0/1:21,0:21:17.13:124,0,17	0/1:8,0:8:5.83:78,0,6
chr10	68368608	.	TTTTG	T	5699.82	PASS	AB=1.000;AC=33;AF=0.589;AN=56;BaseQRankSum=0.867;DP=649;FS=11.650;HRun=0;HaplotypeScore=143.0627;InbreedingCoeff=0.7268;MQ=69.59;MQ0=0;MQRankSum=-2.664;QD=14.58;ReadPosRankSum=-2.818;VQSLOD=3.5358;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:81.84:0,82,1965	1/1:8,9:17:10.90:219,11,0	0/0:22,0:18:43.82:0,44,467	0/0:18,0:15:9.96:0,10,154	0/0:29,0:29:78.61:0,79,1255	1/1:25,0:25:37.49:321,37,0	1/1:17,4:21:54.62:532,55,0	0/0:32,0:32:78.92:0,79,931	0/0:27,0:27:78.20:0,78,1487	1/1:18,4:22:49.22:558,49,0	1/1:14,0:14:20.52:182,21,0	0/1:18,0:17:29.50:64,0,29	0/0:26,0:26:69.19:0,69,1166	0/1:18,0:16:12.29:183,0,12	1/1:31,1:32:38.19:485,38,0	1/1:22,3:24:60.92:576,61,0	1/1:23,0:23:31.78:252,32,0	0/0:14,0:14:7.93:0,8,308	0/1:21,0:21:22.55:126,0,23	1/1:33,1:34:46.79:406,47,0	1/1:20,0:20:21.75:260,22,0	1/1:29,1:29:52.06:461,52,0	0/0:24,0:24:63.19:0,63,1325	0/0:28,0:28:81.02:0,81,1488	1/1:14,0:14:31.53:186,32,0	1/1:29,0:27:42.42:432,42,0	1/1:20,0:20:38.33:339,38,0	1/1:8,0:8:0.80:118,1,0
chr10	68368609	.	TTTG	T	9112.80	PASS	AB=1.000;AC=37;AF=0.661;AN=56;BaseQRankSum=-2.145;DP=649;FS=12.418;HRun=0;HaplotypeScore=120.5274;InbreedingCoeff=0.9105;MQ=70.20;MQ0=0;MQRankSum=-0.625;QD=22.50;ReadPosRankSum=-4.019;VQSLOD=3.2827;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:67.74:0,68,1568	1/1:12,5:17:26.98:354,27,0	0/0:22,0:18:40.53:0,41,386	0/0:19,0:16:5.47:0,5,108	0/0:29,0:29:57.87:0,58,1001	1/1:25,1:26:62.10:539,62,0	1/1:18,3:21:58.46:648,58,0	0/0:31,0:31:82:0,82,910	0/0:27,0:27:78.16:0,78,1216	1/1:19,1:20:46.31:444,46,0	1/1:14,0:14:18.32:150,18,0	1/1:17,1:17:43.14:327,43,0	0/0:26,0:26:67.78:0,68,945	1/1:16,1:15:24.76:346,25,0	1/1:32,3:35:89.24:895,89,0	1/1:21,4:24:68.89:798,69,0	1/1:20,5:25:66.89:611,67,0	0/1:14,0:14:7.69:8,0,237	1/1:20,0:20:28.95:374,29,0	1/1:33,0:33:76.33:645,76,0	1/1:17,2:19:48.85:458,49,0	1/1:30,0:29:71.70:630,72,0	0/0:24,0:24:63.18:0,63,1088	0/0:28,0:28:80.40:0,80,1232	1/1:14,0:14:38.75:324,39,0	1/1:27,3:28:74.99:733,75,0	1/1:16,3:19:51.94:628,52,0	1/1:5,3:8:15.92:202,16,0
chr10	68368610	.	TTG	T	8960.64	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-1.326;DP=647;FS=17.112;HRun=0;HaplotypeScore=109.8986;InbreedingCoeff=0.9617;MQ=70.90;MQ0=0;MQRankSum=-0.453;QD=22.86;ReadPosRankSum=-5.085;VQSLOD=3.0776;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:77.25:0,77,1215	1/1:17,0:17:35:287,35,0	0/0:22,0:18:30.60:0,31,303	0/0:20,0:17:6.17:0,6,82	0/0:29,0:29:49.21:0,49,776	1/1:24,1:25:65.25:543,65,0	1/1:22,0:22:60.07:568,60,0	0/0:31,0:31:60.68:0,61,622	0/0:26,0:26:78.14:0,78,982	1/1:20,0:20:44.89:389,45,0	1/1:14,0:14:26.30:191,26,0	1/1:19,0:18:47.85:424,48,0	0/0:26,0:26:51.96:0,52,723	1/1:17,0:15:35.26:348,35,0	1/1:35,0:35:99:887,100,0	1/1:24,1:24:69.14:735,69,0	1/1:24,1:25:68.33:652,68,0	0/0:14,0:14:4.38:0,4,164	1/1:20,0:20:45.84:439,46,0	1/1:30,3:33:79.49:694,79,0	1/1:17,1:18:48.43:427,48,0	1/1:29,1:29:74.83:662,75,0	0/0:24,0:24:63.14:0,63,860	0/0:27,0:27:66.99:0,67,940	1/1:14,0:14:39.88:330,40,0	1/1:31,0:29:80.64:719,81,0	1/1:18,1:19:53.18:509,53,0	1/1:8,0:8:16.58:158,17,0
chr10	68368611	.	TG	T	8707.66	PASS	AB=1.000;AC=37;AF=0.661;AN=56;BaseQRankSum=-0.868;DP=645;FS=19.190;HRun=1;HaplotypeScore=99.5773;InbreedingCoeff=0.9194;MQ=69.51;MQ0=0;MQRankSum=-3.042;QD=21.61;ReadPosRankSum=-4.631;VQSLOD=2.8420;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:35:80.58:0,81,906	1/1:15,2:17:35.70:275,36,0	0/0:22,1:18:20.58:0,21,224	0/0:17,0:15:18.51:0,19,88	0/0:29,0:29:50.68:0,51,584	1/1:23,2:25:68.60:522,69,0	1/1:19,2:21:60.54:507,61,0	0/0:29,0:29:77.23:0,77,543	0/0:30,0:30:86.96:0,87,844	1/1:20,0:20:46.72:358,47,0	1/1:14,0:14:29.75:216,30,0	1/1:18,0:17:50.15:419,50,0	0/0:26,0:26:19.66:0,20,527	1/1:16,1:15:43.73:373,44,0	1/1:29,5:34:99:870,101,0	1/1:23,2:24:69.06:640,69,0	1/1:23,2:25:69.17:574,69,0	0/1:9,0:14:13.98:14,0,107	1/1:20,0:20:57.90:478,58,0	1/1:33,0:33:84.75:705,85,0	1/1:17,0:17:50.32:423,50,0	1/1:30,1:30:75.75:663,76,0	0/0:25,0:25:62.71:0,63,626	0/0:27,0:27:63.64:0,64,679	1/1:14,0:14:41.19:334,41,0	1/1:29,2:29:79.55:706,80,0	1/1:15,4:19:53.72:480,54,0	1/1:8,0:8:17.81:149,18,0
chr10	68368617	.	T	TTTTTG	1953.68	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=-5.188;DP=636;FS=8.493;HRun=0;HaplotypeScore=178.4396;InbreedingCoeff=0.6149;MQ=68.72;MQ0=0;MQRankSum=-0.058;QD=24.42;ReadPosRankSum=-2.140;VQSLOD=1.9687;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:96.05:0,96,1348	0/0:15,0:15:24.72:0,25,257	0/0:25,0:19:38.43:0,38,367	0/0:18,0:16:26.14:0,26,169	0/0:27,0:27:58.73:0,59,828	0/0:21,0:21:0.97:0,1,157	0/0:22,0:22:43.07:0,43,467	1/1:3,30:34:50.48:1396,50,0	0/0:32,0:32:76.19:0,76,1122	0/0:21,0:21:48.99:0,49,504	0/0:16,0:16:24.62:0,25,173	0/0:19,0:18:8.25:0,8,45	0/0:22,0:22:52.78:0,53,749	0/0:16,0:14:3.49:0,3,33	0/0:31,0:31:36.16:0,36,410	0/0:26,0:25:41.21:0,41,495	0/0:23,0:23:29.14:0,29,332	1/1:12,0:17:41.77:677,42,0	0/0:22,0:22:26.31:0,26,171	0/1:29,0:29:2.56:3,0,94	0/0:15,0:15:12.92:0,13,146	0/0:27,0:26:17.65:0,18,161	0/0:28,0:28:67.46:0,67,995	0/0:26,0:26:63.26:0,63,1001	0/0:15,0:15:18.70:0,19,122	0/0:28,0:26:2.42:0,2,179	0/0:19,0:19:21.61:0,22,393	0/0:6,0:6:9.50:0,10,148
chr10	68368955	.	TAAACAAAC	T	12340.71	PASS	AC=38;AF=0.704;AN=54;BaseQRankSum=3.503;DP=684;FS=0.895;HRun=0;HaplotypeScore=180.6206;InbreedingCoeff=0.9249;MQ=54.80;MQ0=3;MQRankSum=-12.762;QD=29.31;ReadPosRankSum=-1.359;VQSLOD=4.4803;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:54:81.23:0,81,2671	1/1:1,3:4:6.02:151,6,0	0/0:34,0:32:21.02:0,21,551	0/0:27,0:22:18.06:0,18,622	0/0:10,0:28:60.21:0,60,2036	1/1:14,12:26:18.06:432,18,0	1/1:9,13:22:33.11:790,33,0	1/1:21,0:21:2.37:8,2,0	0/0:8,0:20:32.97:0,33,316	1/1:13,12:25:36.12:876,36,0	1/1:4,13:17:17.89:361,18,0	1/1:7,8:15:24.08:605,24,0	0/0:27,0:27:48.16:0,48,1825	1/1:9,12:21:27.09:660,27,0	1/1:10,22:32:63.22:1504,63,0	1/1:17,22:39:44.58:1113,45,0	1/1:13,10:23:15.05:359,15,0	1/1:7,5:12:8.94:168,9,0	1/1:13,6:19:17.91:393,18,0	1/1:7,17:24:30.10:613,30,0	./.	1/1:15,13:28:30.10:667,30,0	0/0:22,0:22:48.64:0,49,1889	0/0:26,0:26:57.20:0,57,2287	1/1:5,12:17:21.07:468,21,0	1/1:11,24:35:69.14:1500,69,0	1/1:12,22:33:60.21:1447,60,0	1/1:2,5:7:9.03:224,9,0
chr10	68369115	.	TTCC	T	9962.89	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=13.739;DP=661;FS=1.069;HRun=0;HaplotypeScore=105.0056;InbreedingCoeff=0.9872;MQ=65.67;MQ0=5;MQRankSum=-0.272;QD=28.22;ReadPosRankSum=5.524;VQSLOD=4.9210;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:75.20:0,75,1423	1/1:0,11:11:18.06:267,18,0	0/0:38,0:25:47.98:0,48,672	0/0:30,0:22:24.21:0,24,410	0/0:24,0:24:66.20:0,66,1288	1/1:2,20:22:48.16:711,48,0	1/1:5,13:18:9.31:379,9,0	0/0:26,0:24:51.09:0,51,788	0/0:20,0:19:51.15:0,51,949	0/0:35,0:35:90.29:0,90,1763	0/0:20,0:20:54:0,54,960	1/1:2,7:9:15.05:222,15,0	0/0:27,0:27:69.23:0,69,1360	1/1:3,16:19:36.12:533,36,0	1/1:3,17:20:33.11:489,33,0	1/1:7,18:25:48.16:711,48,0	1/1:7,29:36:75.21:1087,75,0	0/0:18,0:18:49.98:0,50,1003	1/1:2,14:16:42.09:564,42,0	1/1:2,14:16:38.98:502,39,0	1/1:4,21:26:25.49:479,25,0	1/1:7,24:30:63.10:883,63,0	0/0:12,0:12:36.12:0,36,709	0/0:28,0:28:75.24:0,75,1476	1/1:5,21:26:57.19:845,57,0	1/1:8,29:37:27.89:1143,28,0	1/1:4,28:32:60.20:889,60,0	1/1:2,7:9:18.06:259,18,0
chr10	68369683	.	AC	A	868.91	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.684;DP=712;FS=0.800;HRun=1;HaplotypeScore=69.8724;InbreedingCoeff=0.9975;MQ=90.99;MQ0=0;MQRankSum=-3.212;QD=36.20;ReadPosRankSum=1.125;VQSLOD=4.0113;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,102,1566	0/0:10,0:10:30.10:0,30,479	0/0:19,0:19:57.17:0,57,869	0/0:41,0:41:99:0,105,1586	0/0:30,0:30:81.26:0,81,1271	0/0:29,0:29:87.30:0,87,1390	0/0:21,0:21:60.20:0,60,959	0/0:26,0:26:78.26:0,78,1227	1/1:0,24:24:69.23:964,69,0	0/0:38,0:38:99:0,114,1822	0/0:23,0:23:69.21:0,69,1054	0/0:19,0:19:57.17:0,57,864	0/0:20,0:20:60.20:0,60,959	0/0:23,0:23:69.21:0,69,1075	0/0:40,0:40:99:0,120,1915	0/0:29,0:28:87.30:0,87,1391	0/0:22,0:22:66.23:0,66,1054	0/0:23,0:23:69.24:0,69,1099	0/0:25,0:25:72.23:0,72,1128	0/0:29,0:29:84.29:0,84,1341	0/0:30,0:30:90.31:0,90,1431	0/0:25,0:25:75.24:0,75,1154	0/0:19,0:19:57.19:0,57,911	0/0:21,0:21:63.21:0,63,1007	0/0:23,0:23:63.20:0,63,984	0/0:35,0:35:99:0,105,1628	0/0:22,0:22:66.23:0,66,1052	0/0:8,0:8:24.08:0,24,384
chr10	68369801	.	GA	G	15382.65	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=9.087;DP=635;FS=5.211;HRun=2;HaplotypeScore=65.6588;InbreedingCoeff=0.9901;MQ=78.89;MQ0=0;MQRankSum=-5.140;QD=36.37;ReadPosRankSum=2.181;VQSLOD=5.6079;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,138,2007	1/1:0,14:14:36.12:467,36,0	0/0:25,0:25:72.17:0,72,1040	0/0:27,0:25:65.03:0,65,921	0/0:18,0:18:54.15:0,54,768	1/1:0,21:21:60.20:779,60,0	1/1:1,19:20:57.19:740,57,0	1/1:2,22:24:66.20:841,66,0	0/0:21,0:21:63.21:0,63,944	1/1:0,24:24:72.23:928,72,0	1/1:0,12:12:30.10:389,30,0	1/1:0,23:23:60.20:779,60,0	0/0:24,1:25:36.29:0,36,1033	1/1:0,15:15:42.14:545,42,0	1/1:0,38:38:99:1473,114,0	1/1:0,35:35:99:1325,102,0	1/1:0,13:13:33.11:428,33,0	1/1:0,18:18:51.17:662,51,0	1/1:0,32:32:96.27:1213,96,0	1/1:0,19:19:57.19:739,57,0	1/1:0,22:22:60.20:779,60,0	1/1:0,21:21:60.20:779,60,0	0/0:20,0:20:60.19:0,60,878	0/0:28,0:28:84.28:0,84,1256	1/1:1,16:17:42.14:545,42,0	1/1:0,26:26:78.24:997,78,0	1/1:1,25:26:66.21:857,66,0	1/1:0,3:3:9.03:117,9,0
chr10	68370021	.	G	GAA	2285.75	PASS	AB=0.943;AC=5;AF=0.089;AN=56;BaseQRankSum=-8.561;DP=601;FS=0.521;HRun=7;HaplotypeScore=77.4252;InbreedingCoeff=0.7792;MQ=70.36;MQ0=0;MQRankSum=1.039;QD=24.06;ReadPosRankSum=-1.119;VQSLOD=2.4305;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,102,1186	0/0:7,0:7:18.04:0,18,199	0/0:26,0:23:25.80:0,26,397	0/0:21,0:17:43.67:0,44,470	0/0:26,0:26:63.17:0,63,730	0/0:18,0:18:54.16:0,54,627	0/0:22,0:22:54.13:0,54,617	0/0:22,0:22:57.11:0,57,633	0/0:15,0:15:39.10:0,39,442	1/1:5,34:40:99:1611,105,0	1/1:3,18:21:48.16:787,48,0	0/0:25,0:25:69.17:0,69,782	0/0:13,0:13:36.10:0,36,417	0/0:10,0:10:27.08:0,27,310	0/0:23,0:23:57.15:0,57,651	0/0:24,0:24:66.18:0,66,754	0/0:38,0:38:99:0,99,1126	0/0:17,0:17:39.10:0,39,450	0/0:20,0:20:48.11:0,48,540	0/0:14,0:14:36.10:0,36,419	0/0:25,0:25:60.16:0,60,696	0/0:13,0:13:33.09:0,33,384	0/0:15,0:15:36.10:0,36,416	0/0:26,0:26:69.15:0,69,774	0/0:15,0:15:34.89:0,35,417	0/1:31,2:33:17.12:17,0,778	0/0:24,0:24:72.16:0,72,818	0/0:9,0:9:24.06:0,24,280
chr10	68370113	.	G	GCTCGGT	6881.77	PASS	AB=0.714;AC=31;AF=0.554;AN=56;BaseQRankSum=-3.791;DP=337;FS=115.083;HRun=0;HaplotypeScore=107.5764;InbreedingCoeff=0.8168;MQ=81.67;MQ0=0;MQRankSum=-10.570;QD=41.46;ReadPosRankSum=-1.254;VQSLOD=1.5707;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:66.21:0,66,1422	1/1:1,4:5:6.49:205,6,0	0/0:11,0:11:27.09:0,27,521	0/0:17,0:17:10.04:0,10,539	0/0:13,0:13:21.07:0,21,466	1/1:9,6:15:21.54:671,22,0	1/1:10,4:14:6.49:157,6,0	0/0:17,0:17:39.13:0,39,834	0/0:17,0:17:41.64:0,42,930	0/0:18,0:18:27.09:0,27,598	0/0:6,0:6:12.04:0,12,264	1/1:3,7:12:24.08:700,24,0	0/0:12,0:12:23.76:0,24,531	1/1:3,2:5:6.02:204,6,0	1/1:7,7:14:21.07:573,21,0	1/1:3,8:11:24.55:770,25,0	1/1:10,6:16:18.06:564,18,0	0/0:11,0:11:30.10:0,30,666	1/1:10,2:12:12.51:370,13,0	1/1:3,6:9:15.52:511,16,0	1/1:10,2:12:3.01:54,3,0	1/1:3,3:6:9.03:286,9,0	0/0:11,0:11:27.09:0,27,599	0/0:12,0:12:18.06:0,18,399	1/1:3,5:8:18.06:519,18,0	0/1:9,6:15:39.54:630,0,40	1/1:4,4:8:15.52:465,16,0	1/1:2,2:4:6.02:205,6,0
chr10	68373780	.	G	GT	1217.72	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-8.388;DP=593;FS=2.970;HRun=7;HaplotypeScore=79.4610;InbreedingCoeff=0.9699;MQ=47.07;MQ0=28;MQRankSum=-0.697;QD=24.85;ReadPosRankSum=1.474;VQSLOD=4.3347;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:27:63.07:0,63,600	0/0:8,0:8:24.04:0,24,231	0/0:6,0:4:11.98:0,12,107	0/0:6,0:6:17.05:0,17,145	0/0:27,0:26:66:0,66,623	0/0:24,0:24:57.09:0,57,549	0/0:16,0:15:32.87:0,33,318	0/0:28,0:17:45.01:0,45,418	0/0:27,0:25:69.03:0,69,649	1/1:2,24:26:65.20:796,65,0	1/1:1,21:19:45.14:543,45,0	0/0:19,0:19:51.08:0,51,492	0/0:9,0:7:18.03:0,18,173	0/0:20,0:20:57.01:0,57,535	0/0:19,0:18:47.99:0,48,449	0/0:18,0:18:48.08:0,48,462	0/0:23,0:22:63.10:0,63,607	0/0:15,0:15:39.03:0,39,368	0/0:19,0:15:45.07:0,45,434	0/0:42,0:40:99:0,111,1050	0/0:9,0:8:18.02:0,18,168	0/0:25,0:23:54.08:0,54,521	0/0:26,0:26:60.09:0,60,575	0/0:21,0:20:50.98:0,51,479	0/0:25,0:25:65.86:0,66,621	0/0:29,1:29:50.86:0,51,758	0/0:30,0:29:75.07:0,75,713	0/0:22,0:22:66.11:0,66,637
chr10	68373961	.	T	TG	11130.17	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-9.743;DP=490;FS=11.824;HRun=4;HaplotypeScore=48.1919;InbreedingCoeff=0.9932;MQ=72.43;MQ0=0;MQRankSum=-1.651;QD=33.03;ReadPosRankSum=1.530;VQSLOD=4.4954;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:72.20:0,72,816	1/1:1,7:8:21.07:287,21,0	0/0:13,0:11:30.06:0,30,328	0/0:14,0:14:39.10:0,39,433	0/0:15,0:15:39.10:0,39,442	1/1:5,8:13:30.08:383,30,0	1/1:0,14:14:33.11:451,33,0	1/1:4,24:28:66.18:883,66,0	0/0:26,0:26:66.19:0,66,749	1/1:4,19:23:51.16:681,51,0	1/1:1,7:8:15.05:205,15,0	1/1:2,23:25:66.22:898,66,0	0/0:11,0:11:24.06:0,24,271	1/1:0,24:24:63.21:861,63,0	1/1:1,18:19:48.16:657,48,0	1/1:2,12:14:36.12:493,36,0	1/1:2,18:20:42.14:575,42,0	1/1:1,13:14:39.13:534,39,0	1/1:3,9:12:35.12:425,35,0	1/1:1,14:15:27.09:369,27,0	1/1:1,17:18:45.15:616,45,0	1/1:0,14:14:36.11:477,36,0	0/0:18,0:18:45.09:0,45,496	0/0:27,0:27:72.16:0,72,802	1/1:0,16:16:36.12:492,36,0	1/1:1,27:28:78.26:1065,78,0	1/1:1,18:19:42.14:575,42,0	1/1:0,5:5:15.05:205,15,0
chr10	68374545	.	AAAAAAAAAAAAAAAC	A	445.39	PASS	AB=1.000;AC=4;AF=0.071;AN=56;BaseQRankSum=3.897;DP=397;FS=9.440;HRun=0;HaplotypeScore=143.4527;InbreedingCoeff=0.3887;MQ=58.07;MQ0=20;MQRankSum=-1.482;QD=13.92;ReadPosRankSum=-1.385;VQSLOD=1.7578;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:51.18:0,51,2657	0/0:2,0:2:6.02:0,6,131	0/0:58,0:16:25.28:0,25,668	0/0:52,0:11:18.10:0,18,144	0/0:25,0:23:59.40:0,59,2622	0/0:11,0:11:24.08:0,24,603	0/0:7,0:6:18.06:0,18,472	0/1:20,0:20:9.36:160,0,9	0/0:8,0:7:18.06:0,18,778	0/1:6,0:5:12.14:12,0,33	0/0:5,0:4:3.01:0,3,36	0/0:6,0:5:15.04:0,15,311	0/0:4,0:4:12.04:0,12,649	0/0:9,0:9:24.03:0,24,458	0/0:10,0:10:16.30:0,16,412	0/0:7,0:7:15.05:0,15,383	0/0:10,0:8:17.98:0,18,427	1/1:2,4:6:15.01:383,15,0	0/0:13,0:10:12.04:0,12,361	0/0:16,0:15:33.11:0,33,1011	0/0:10,0:9:27.09:0,27,674	0/0:12,0:12:21.07:0,21,525	0/0:17,0:17:42.61:0,43,1753	0/0:12,0:12:21.52:0,22,927	0/0:9,0:9:21:0,21,416	0/0:14,0:13:30.10:0,30,708	0/0:11,0:11:21.07:0,21,561	0/0:14,0:14:24.02:0,24,334
chr10	68374546	.	AAAAAAAAAAAAAAC	A	545.09	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=4.487;DP=420;FS=3.436;HRun=0;HaplotypeScore=145.2871;InbreedingCoeff=0.8154;MQ=59.91;MQ0=22;MQRankSum=-0.760;QD=17.58;ReadPosRankSum=-0.413;VQSLOD=2.2785;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:51.17:0,51,2472	0/0:3,0:3:9.03:0,9,190	0/0:59,0:17:34.81:0,35,621	0/0:57,0:13:18.97:0,19,152	0/0:25,0:22:58.70:0,59,2434	0/0:13,0:12:30.08:0,30,679	0/0:7,0:6:18.06:0,18,421	1/1:5,14:19:32.31:287,32,0	0/0:8,0:7:18.06:0,18,730	1/1:6,0:5:2.52:35,3,0	0/0:4,0:3:2.97:0,3,20	0/0:8,0:7:21.06:0,21,456	0/0:4,0:4:12.04:0,12,605	0/0:10,0:10:24.03:0,24,416	0/0:13,0:13:24.97:0,25,631	0/0:7,0:7:18.03:0,18,418	0/0:11,0:9:22.29:0,22,500	1/1:5,1:6:15.01:352,15,0	0/0:15,0:12:18.06:0,18,482	0/0:17,0:16:42.14:0,42,1136	0/0:11,0:10:30.10:0,30,668	0/0:12,0:12:21.04:0,21,439	0/0:17,0:17:45.58:0,46,1725	0/0:12,0:12:18.53:0,19,827	0/0:10,0:10:21.05:0,21,445	0/0:15,0:14:33.08:0,33,681	0/0:13,0:13:27.09:0,27,645	0/0:15,0:15:24.02:0,24,349
chr10	68379390	.	CCT	C	949.54	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=1.607;DP=609;FS=4.789;HRun=0;HaplotypeScore=87.6386;InbreedingCoeff=0.9953;MQ=80.96;MQ0=0;MQRankSum=-3.760;QD=29.67;ReadPosRankSum=1.663;VQSLOD=5.1938;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,117,2061	0/0:8,0:8:21.07:0,21,356	0/0:20,0:20:56.55:0,57,978	0/0:14,0:14:39.04:0,39,605	0/0:25,0:25:75.26:0,75,1316	0/0:18,0:18:54.17:0,54,921	0/0:13,0:13:39.13:0,39,684	0/0:33,0:33:93.31:0,93,1614	0/0:24,0:24:69.21:0,69,1184	1/1:2,13:15:39.13:535,39,0	1/1:4,13:17:39.13:536,39,0	0/0:27,0:27:81.28:0,81,1418	0/0:18,0:18:51.16:0,51,856	0/0:16,0:16:39.13:0,39,687	0/0:18,0:18:51.17:0,51,899	0/0:22,0:22:66.23:0,66,1155	0/0:36,0:36:99:0,108,1868	0/0:30,0:30:90.31:0,90,1589	0/0:21,0:21:54.18:0,54,954	0/0:27,0:27:78.27:0,78,1377	0/0:30,0:30:84.24:0,84,1434	0/0:22,0:22:60.19:0,60,1038	0/0:18,0:18:50.74:0,51,897	0/0:29,0:29:84.27:0,84,1446	0/0:14,0:14:36.12:0,36,639	0/0:33,1:34:55.09:0,55,1581	0/0:9,0:9:21.07:0,21,373	0/0:10,0:10:30.08:0,30,501
chr10	68380300	.	GGTGTGT	G	227.70	PASS	AB=0.964;AC=8;AF=0.148;AN=54;BaseQRankSum=1.312;DP=509;FS=0.962;HRun=0;HaplotypeScore=116.2695;InbreedingCoeff=0.0183;MQ=67.89;MQ0=21;MQRankSum=-0.319;QD=2.00;ReadPosRankSum=1.412;VQSLOD=2.0867;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:23:23.73:0,24,510	0/1:10,0:10:8.13:8,0,37	0/0:37,0:22:3.90:0,4,44	0/0:32,0:24:6.02:0,6,128	./.	0/0:14,0:13:5.99:0,6,50	0/0:16,0:16:17.81:0,18,148	0/0:18,0:18:24.08:0,24,471	0/0:25,0:24:24.07:0,24,540	0/1:16,6:20:12.66:205,0,13	0/0:5,0:7:3:0,3,25	0/0:16,0:16:26.44:0,26,264	0/0:22,0:22:14.94:0,15,233	0/0:19,0:19:17.96:0,18,259	0/1:21,0:20:6.26:6,0,79	0/1:27,0:27:15.87:16,0,365	0/1:12,0:11:24.09:24,0,98	1/1:7,0:9:5.95:80,6,0	0/0:13,0:12:5.98:0,6,50	0/0:14,0:14:11.86:0,12,89	0/0:30,0:27:26.85:0,27,233	0/1:11,0:10:14.96:15,0,56	0/0:15,0:13:6.02:0,6,133	0/0:14,0:14:9.02:0,9,148	0/0:12,0:12:15.02:0,15,207	0/0:18,0:18:24.54:0,25,333	0/0:24,0:23:24.34:0,24,256	0/0:15,0:15:26.84:0,27,342
chr10	68380733	.	GAC	G	502.36	PASS	AB=0.866;AC=21;AF=0.525;AN=40;BaseQRankSum=4.587;DP=212;FS=7.134;HRun=0;HaplotypeScore=61.4829;InbreedingCoeff=0.3715;MQ=30.08;MQ0=16;MQRankSum=-3.449;QD=3.83;ReadPosRankSum=0.255;VQSLOD=1.0773;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:11:14.95:0,15,205	./.	./.	./.	0/0:7,0:7:6:0,6,73	0/1:4,1:4:0:0,0,0	1/1:6,3:4:2.98:21,3,0	0/1:23,0:17:25.34:114,0,25	0/1:11,0:11:0:0,0,0	1/1:6,0:4:7.11:42,7,0	./.	0/1:5,4:9:4.21:37,0,4	0/0:9,0:9:8.89:0,9,157	./.	./.	1/1:5,4:9:6.02:90,6,0	./.	0/1:5,0:5:11.42:12,0,11	1/1:7,1:5:14.32:117,14,0	./.	0/0:1,3:3:0:0,0,0	0/1:8,1:8:0:0,0,0	0/0:17,0:16:14.97:0,15,236	0/0:6,0:5:8.99:0,9,163	1/1:11,4:13:5.95:44,6,0	1/1:8,1:8:10.40:52,10,0	0/1:3,4:7:1.95:46,0,2	1/1:4,2:4:7.23:58,7,0
chr10	68380735	.	CAG	C	247.69	PASS	AB=0.978;AC=14;AF=0.350;AN=40;BaseQRankSum=2.250;DP=229;FS=23.341;HRun=0;HaplotypeScore=67.1580;InbreedingCoeff=0.1861;MQ=30.19;MQ0=17;MQRankSum=-4.289;QD=2.27;ReadPosRankSum=1.796;VQSLOD=-0.1910;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:11:15.02:0,15,244	./.	./.	./.	0/0:9,0:9:9.03:0,9,149	0/1:5,0:4:0:0,0,0	0/1:10,0:5:7.45:21,0,7	0/1:19,5:17:39.99:131,0,40	0/1:11,0:11:0:0,0,0	0/0:7,0:5:6.44:0,6,47	./.	0/1:9,0:9:13.71:14,0,27	0/0:10,0:10:8.89:0,9,159	./.	./.	1/1:9,0:9:6:54,6,0	./.	0/0:5,0:5:3.90:0,4,42	0/1:9,0:6:14.13:40,0,14	./.	0/0:4,0:3:0:0,0,0	0/1:9,0:8:0:0,0,0	0/0:18,0:17:18.02:0,18,272	0/0:7,0:6:8.99:0,9,159	0/0:15,0:13:2.68:0,3,11	1/1:9,0:8:8.95:60,9,0	0/1:8,0:8:14.34:17,0,14	1/1:6,0:4:5.28:32,5,0
chr10	68380741	.	GAC	G	600.50	PASS	AB=0.848;AC=23;AF=0.575;AN=40;BaseQRankSum=4.627;DP=269;FS=23.090;HRun=0;HaplotypeScore=79.3156;InbreedingCoeff=0.5478;MQ=30.49;MQ0=19;MQRankSum=-5.335;QD=3.87;ReadPosRankSum=-0.024;VQSLOD=0.7196;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:14:20.95:0,21,324	./.	./.	./.	0/0:12,0:12:9.03:0,9,173	0/1:3,2:4:0:0,0,0	1/1:11,0:6:2.50:46,3,0	1/1:28,0:19:12.36:158,12,0	0/0:11,0:11:8.75:0,9,52	1/1:10,0:8:16.04:105,16,0	./.	0/1:10,1:11:6.47:6,0,17	0/0:10,0:10:8.89:0,9,172	./.	./.	1/1:10,1:11:7.72:35,8,0	./.	0/1:5,1:6:15.38:15,0,19	1/1:9,1:7:11.05:99,11,0	./.	0/1:7,0:6:0:0,0,0	0/1:6,3:8:0:0,0,0	0/0:19,0:18:18.06:0,18,327	0/0:8,0:7:11.98:0,12,196	1/1:13,5:16:4.91:16,5,0	1/1:10,4:13:19.66:176,20,0	1/1:9,0:9:4.40:28,4,0	1/1:5,1:4:9.09:60,9,0
chr10	68380749	.	GAC	G	1123.40	PASS	AB=0.788;AC=27;AF=0.587;AN=46;BaseQRankSum=5.513;DP=319;FS=0.000;HRun=0;HaplotypeScore=90.2105;InbreedingCoeff=0.3893;MQ=33.24;MQ0=20;MQRankSum=-2.845;QD=5.51;ReadPosRankSum=0.043;VQSLOD=2.6545;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:17:29.98:0,30,445	1/1:1,4:5:2.94:18,3,0	./.	./.	0/0:16,0:15:17.83:0,18,258	0/1:3,3:5:0:0,0,0	1/1:6,8:9:9:112,9,0	0/1:30,0:21:57.40:96,0,57	0/0:12,0:12:8.06:0,8,113	1/1:11,0:9:19.05:132,19,0	1/1:8,0:7:3:25,3,0	0/1:8,7:15:6.71:34,0,7	0/0:14,0:14:20.86:0,21,318	./.	1/1:7,8:14:3:25,3,0	1/1:9,6:15:11.86:160,12,0	./.	0/1:5,1:6:1.74:2,0,64	0/1:9,3:8:77.08:137,0,77	./.	1/1:5,3:7:2.73:24,3,0	0/1:7,2:8:0:0,0,0	0/0:24,0:23:27.06:0,27,441	0/0:11,0:10:14.99:0,15,254	1/1:10,8:16:9.03:136,9,0	1/1:12,3:14:17.07:148,17,0	0/1:5,4:9:20.10:37,0,20	1/1:5,3:6:17.70:195,18,0
chr10	68380779	.	GAGAC	G	770.12	PASS	AB=0.853;AC=4;AF=0.071;AN=56;BaseQRankSum=1.114;DP=475;FS=15.286;HRun=0;HaplotypeScore=139.8583;InbreedingCoeff=0.3349;MQ=56.39;MQ0=16;MQRankSum=-3.617;QD=16.39;ReadPosRankSum=-2.770;VQSLOD=2.1892;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:47.91:0,48,989	0/0:8,0:8:15.05:0,15,238	0/1:17,0:8:8.36:8,0,109	0/0:24,0:17:1.98:0,2,144	0/0:24,0:23:45.09:0,45,861	0/0:11,0:10:6.02:0,6,73	0/0:22,0:17:33.03:0,33,653	0/1:14,10:20:14.53:687,0,15	0/0:14,0:14:24.08:0,24,421	0/0:23,0:21:56.69:0,57,918	0/0:14,0:12:17.99:0,18,292	0/0:21,0:21:17.83:0,18,350	0/0:19,0:19:38.99:0,39,899	0/0:15,0:15:6.02:0,6,73	0/0:26,0:25:21.07:0,21,342	0/0:18,0:18:36.12:0,36,720	0/0:7,0:7:12:0,12,151	1/1:5,1:6:12.04:180,12,0	0/0:17,0:15:48.10:0,48,748	0/0:6,0:6:9.03:0,9,110	0/0:17,0:17:24.08:0,24,421	0/0:12,0:12:11.97:0,12,206	0/0:17,0:17:33.11:0,33,819	0/0:17,0:15:32.90:0,33,733	0/0:21,0:19:24.08:0,24,443	0/0:17,0:16:27.02:0,27,474	0/0:21,0:21:30.04:0,30,433	0/0:13,0:11:32.84:0,33,630
chr10	68381143	.	GTTTA	G	2245.16	PASS	AB=1.000;AC=29;AF=0.690;AN=42;BaseQRankSum=4.337;DP=316;FS=4.323;HRun=0;HaplotypeScore=75.8154;InbreedingCoeff=0.4621;MQ=56.20;MQ0=7;MQRankSum=-4.280;QD=10.79;ReadPosRankSum=-0.014;VQSLOD=2.2314;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:21.07:0,21,462	1/1:6,4:10:3.01:47,3,0	./.	./.	0/0:11,0:11:3.01:0,3,71	1/1:12,15:27:54.18:837,54,0	./.	./.	1/1:1,1:2:3.01:47,3,0	0/0:7,0:7:3.01:0,3,52	0/0:9,0:9:6:0,6,77	1/1:6,3:9:6.02:94,6,0	0/0:6,0:6:3.01:0,3,71	1/1:6,3:9:6.02:93,6,0	1/1:6,2:8:6.02:82,6,0	1/1:8,2:10:9.01:118,9,0	1/1:14,12:26:2.50:131,3,0	0/1:17,0:17:10.20:23,0,10	1/1:18,1:17:6:71,6,0	./.	./.	1/1:2,1:3:3.01:47,3,0	./.	0/0:2,0:2:3:0,3,26	1/1:16,2:16:9.03:129,9,0	1/1:10,5:15:24.07:337,24,0	1/1:7,4:11:9.03:140,9,0	1/1:13,11:24:12.04:187,12,0
chr10	68381186	.	TA	T	746.15	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=0.378;DP=259;FS=4.147;HRun=2;HaplotypeScore=46.0693;InbreedingCoeff=0.5878;MQ=58.08;MQ0=0;MQRankSum=-0.115;QD=31.09;ReadPosRankSum=-1.518;VQSLOD=2.6615;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:33.08:0,33,450	0/0:6,0:6:11.50:0,11,120	0/0:6,0:3:9.02:0,9,114	0/0:6,0:5:15:0,15,177	0/0:4,0:4:12.04:0,12,178	0/0:24,0:24:57.95:0,58,369	0/0:4,0:4:12.04:0,12,177	1/1:0,24:23:69.10:840,69,0	0/0:5,0:5:14.54:0,15,186	0/0:6,0:6:18.05:0,18,247	0/0:9,0:9:24.08:0,24,352	0/0:10,0:10:26.02:0,26,267	0/0:5,0:5:15.05:0,15,222	0/0:3,0:3:4.87:0,5,16	0/0:9,0:9:26.50:0,26,282	0/0:8,0:8:23.03:0,23,248	0/0:24,0:24:46.52:0,47,549	0/0:12,0:12:10.33:0,10,140	0/0:7,0:6:17.54:0,18,213	0/0:9,0:9:24.07:0,24,335	0/0:4,0:4:8.96:0,9,99	0/0:5,0:5:14.52:0,15,167	0/0:5,0:5:15.05:0,15,222	0/0:2,0:2:3:0,3,25	0/0:11,0:11:31.86:0,32,367	0/0:14,0:14:36.64:0,37,362	0/0:9,0:9:22.54:0,23,247	0/0:15,0:15:22.02:0,22,213
chr10	68381410	.	C	CA	875.67	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.640;DP=573;FS=7.189;HRun=7;HaplotypeScore=62.6432;InbreedingCoeff=0.9734;MQ=75.03;MQ0=1;MQRankSum=-0.166;QD=25.76;ReadPosRankSum=-5.605;VQSLOD=1.4521;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:53.75:0,54,514	0/0:6,0:6:18.03:0,18,173	0/0:32,0:23:50.94:0,51,474	0/0:24,0:19:18.88:0,19,237	0/0:16,0:16:48.07:0,48,460	0/0:13,0:13:27.04:0,27,261	0/0:25,0:25:63.03:0,63,587	1/1:6,27:34:84.10:971,84,0	0/0:16,0:16:33.04:0,33,313	0/0:20,0:20:54.05:0,54,510	0/0:15,0:15:45.07:0,45,431	0/0:22,0:22:45.07:0,45,434	0/0:17,0:17:45.07:0,45,434	0/0:13,0:13:36.06:0,36,348	0/0:37,0:37:93.14:0,93,894	0/0:34,0:34:93.14:0,93,898	0/0:25,0:25:69.09:0,69,660	0/0:19,0:19:45.73:0,46,503	0/0:31,1:32:47.89:0,48,746	0/0:8,0:8:24.04:0,24,231	0/0:25,0:25:60.09:0,60,579	0/0:11,0:11:33.04:0,33,314	0/0:7,0:7:18.03:0,18,174	0/0:31,0:31:90.14:0,90,869	0/0:12,0:12:30.02:0,30,283	0/0:21,0:21:57.08:0,57,546	0/0:21,0:21:54.09:0,54,521	0/0:11,0:11:33.05:0,33,319
chr10	68382219	.	AATGT	A	692.15	PASS	AB=1.000;AC=6;AF=0.107;AN=56;BaseQRankSum=-3.660;DP=743;FS=12.433;HRun=0;HaplotypeScore=222.5783;InbreedingCoeff=0.3332;MQ=64.74;MQ0=5;MQRankSum=-2.009;QD=5.45;ReadPosRankSum=-5.247;VQSLOD=-0.0830;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,111,2712	0/0:12,0:12:29.97:0,30,340	0/0:35,0:27:74.63:0,75,1658	0/0:43,0:35:87.93:0,88,2178	0/0:15,0:15:45.14:0,45,1087	0/1:27,0:24:1.91:2,0,123	0/0:27,0:27:15.09:0,15,314	1/1:1,15:16:44.94:780,45,0	0/0:32,0:32:90.29:0,90,2213	0/0:39,0:36:68.56:0,69,843	0/0:8,0:8:11.93:0,12,113	0/0:27,0:24:20.04:0,20,181	0/0:19,0:18:54.17:0,54,1305	0/0:21,0:18:20.77:0,21,151	0/1:31,0:29:15.23:15,0,140	0/0:31,0:29:49.27:0,49,409	0/1:31,0:31:1.46:1,0,410	0/0:23,0:23:56.98:0,57,670	0/0:30,0:25:8.61:0,9,434	0/0:27,0:27:13.79:0,14,421	0/0:44,0:43:17.41:0,17,260	0/0:17,0:17:20.99:0,21,202	0/0:20,0:20:48.15:0,48,1182	0/0:34,0:33:84.18:0,84,1993	0/0:22,0:21:23.01:0,23,334	0/0:30,0:27:67.86:0,68,562	0/1:22,0:19:2.03:2,0,208	0/0:13,0:13:27.99:0,28,249
chr10	68382225	.	CGT	C	58.32	PASS	AB=0.977;AC=9;AF=0.161;AN=56;BaseQRankSum=2.735;DP=806;FS=13.116;HRun=0;HaplotypeScore=205.1459;InbreedingCoeff=0.0416;MQ=55.11;MQ0=14;MQRankSum=1.417;QD=0.24;ReadPosRankSum=-0.074;VQSLOD=1.9608;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:53,1:54:54.90:55,0,815	0/0:11,0:12:9.41:0,9,76	1/1:31,0:23:2.90:16,3,0	0/0:37,0:29:14.90:0,15,162	0/1:16,1:17:20.62:21,0,259	0/0:27,0:22:3.03:0,3,15	0/0:31,0:30:4.61:0,5,43	0/0:26,0:24:20.86:0,21,121	0/0:36,1:37:9.81:0,10,897	0/1:45,0:41:60.78:61,0,132	0/0:6,0:6:1.25:0,1,3	0/0:29,0:25:8.60:0,9,54	0/0:21,0:20:33.93:0,34,429	0/0:21,0:18:8.38:0,8,39	0/0:36,0:32:2.78:0,3,13	0/0:35,0:32:12.17:0,12,78	0/0:27,0:27:14.97:0,15,83	0/0:23,0:23:23.19:0,23,315	0/0:29,0:24:6.39:0,6,66	0/0:26,1:26:8.58:0,9,66	0/0:52,0:50:5.37:0,5,44	1/1:20,0:17:0.36:1,0,0	0/0:23,0:22:21.56:0,22,461	0/1:42,2:42:14.48:14,0,639	0/0:23,0:22:7.50:0,8,68	0/1:34,0:28:9.54:10,0,71	0/0:24,0:21:11.07:0,11,75	0/0:13,0:13:1.27:0,1,25
chr10	68382248	.	G	GTA	2289.39	PASS	AB=0.829;AC=22;AF=0.393;AN=56;BaseQRankSum=5.530;DP=749;FS=27.313;HRun=0;HaplotypeScore=168.5594;InbreedingCoeff=0.1872;MQ=38.57;MQ0=51;MQRankSum=-1.741;QD=5.90;ReadPosRankSum=-1.855;VQSLOD=1.3085;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:62,0:61:99:0,117,1276	0/1:8,3:10:27.20:95,0,27	0/0:11,0:6:11.51:0,12,119	0/0:12,0:7:21.01:0,21,223	0/0:23,0:21:43.55:0,44,476	1/1:14,8:18:8.51:122,9,0	0/1:39,9:34:25.47:252,0,25	0/0:36,0:13:2.30:0,2,103	0/0:39,0:38:83.99:0,84,1083	0/0:44,0:35:5.78:0,6,433	0/0:12,0:9:2.91:0,3,28	0/1:23,6:22:4.88:107,0,5	0/0:26,0:24:63.65:0,64,647	1/1:18,2:16:12.03:197,12,0	0/1:21,8:25:9.99:52,0,10	1/1:19,7:22:18.03:247,18,0	1/1:17,6:21:0.01:371,0,0	0/0:24,0:23:28.05:0,28,462	0/1:14,2:6:0.08:94,0,0	0/1:11,7:17:28.91:148,0,29	0/1:40,4:38:9.60:18,0,10	0/1:18,2:15:10.99:62,0,11	0/0:24,0:22:20.98:0,21,509	0/0:48,0:46:74.86:0,75,890	1/1:17,5:20:2.43:215,2,0	0/1:30,3:25:60.95:229,0,61	1/1:14,6:17:18.01:219,18,0	0/1:4,3:6:13.31:36,0,13
chr10	68382254	.	GTA	G	1238.23	PASS	AB=0.982;AC=34;AF=0.607;AN=56;BaseQRankSum=7.883;DP=719;FS=6.087;HRun=0;HaplotypeScore=163.3469;InbreedingCoeff=0.0452;MQ=37.67;MQ0=58;MQRankSum=-3.386;QD=2.14;ReadPosRankSum=-3.606;VQSLOD=1.2010;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:60,0:58:66.80:67,0,1094	0/1:10,0:9:6.68:54,0,7	0/0:4,0:1:0.89:0,1,2	0/1:7,0:4:0.82:1,0,27	0/1:22,0:20:37.32:37,0,425	1/1:19,2:17:7.71:44,8,0	0/1:46,0:32:11.19:70,0,11	1/1:36,0:10:6.61:46,7,0	0/0:41,0:40:41.74:0,42,1089	1/1:37,7:33:1.58:414,2,0	1/1:14,1:12:2.92:21,3,0	1/1:26,1:19:3.73:11,4,0	0/0:27,0:24:40.05:0,40,606	1/1:15,3:14:7.11:25,7,0	0/1:26,1:23:3.24:3,0,9	1/1:21,1:19:4.59:26,5,0	0/1:17,3:18:5.98:105,0,6	0/0:19,0:18:17.92:0,18,157	0/1:15,0:5:20.26:23,0,20	1/1:17,0:16:6.82:51,7,0	0/1:46,0:40:18.55:19,0,23	1/1:14,0:9:5.99:50,6,0	0/1:27,0:25:4.99:5,0,499	0/0:49,0:47:15.14:0,15,917	1/1:19,1:19:11.40:85,11,0	0/1:36,1:29:6.77:201,0,7	1/1:18,1:16:3.87:25,4,0	0/1:6,0:5:12.99:18,0,13
chr10	68382258	.	GTGTA	G	989.70	PASS	AB=0.995;AC=22;AF=0.423;AN=52;BaseQRankSum=7.138;DP=732;FS=4.825;HRun=0;HaplotypeScore=173.1342;InbreedingCoeff=0.1641;MQ=37.19;MQ0=69;MQRankSum=-6.096;QD=2.40;ReadPosRankSum=-4.633;VQSLOD=0.9340;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:61,0:59:43.93:0,44,1468	0/1:11,0:10:12.02:12,0,27	./.	./.	0/0:24,0:21:22.02:0,22,661	1/1:22,0:18:5.36:31,5,0	0/1:45,0:31:33.57:67,0,34	0/1:37,0:11:17.44:53,0,17	0/0:40,0:39:44.95:0,45,1166	1/1:39,4:31:8.03:334,8,0	0/0:16,0:13:0.87:0,1,2	0/1:27,0:18:2.52:3,0,8	0/0:27,0:24:43.34:0,43,947	1/1:19,0:14:7.11:23,7,0	0/1:28,0:24:2.68:3,0,8	0/1:24,1:20:1.69:2,0,9	0/1:19,0:17:37.05:99,0,37	1/1:20,0:19:25.63:224,26,0	0/0:19,0:8:2.88:0,3,131	0/1:18,0:16:14.02:14,0,53	0/0:45,0:37:2.87:0,3,40	0/1:14,0:10:0:0,0,0	0/0:29,0:26:35.59:0,36,595	0/0:53,0:49:56.45:0,56,1428	1/1:19,0:17:11.89:86,12,0	0/1:38,0:30:99:188,0,147	0/1:16,0:13:4.33:4,0,14	0/1:9,0:7:0:0,0,0
chr10	68382260	.	GTA	G	870.64	PASS	AB=0.983;AC=28;AF=0.538;AN=52;BaseQRankSum=7.868;DP=744;FS=15.720;HRun=0;HaplotypeScore=170.2948;InbreedingCoeff=0.0518;MQ=36.78;MQ0=73;MQRankSum=-4.030;QD=1.77;ReadPosRankSum=-3.676;VQSLOD=0.7180;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:62,0:60:17.33:0,17,1211	0/1:12,1:12:18.69:55,0,19	./.	./.	0/1:24,0:21:29.92:30,0,499	1/1:24,0:19:4.87:30,5,0	0/1:44,0:30:38.88:64,0,39	0/1:37,0:9:19.29:37,0,19	0/0:40,0:39:31.28:0,31,930	1/1:43,0:31:10.46:196,10,0	1/1:15,1:13:2.62:22,3,0	0/1:28,0:19:2.44:2,0,9	0/0:27,0:24:47.03:0,47,803	1/1:18,0:13:7.11:23,7,0	0/1:27,0:23:2.63:3,0,9	0/1:25,0:19:1.55:2,0,11	0/1:24,0:22:38.29:101,0,38	1/1:19,1:18:25.04:172,25,0	0/0:20,0:10:4.19:0,4,149	0/1:18,1:16:13.54:14,0,40	0/0:45,1:38:2.84:0,3,19	1/1:13,1:10:3:25,3,0	0/1:29,0:26:15.88:16,0,460	0/0:54,0:50:47.54:0,48,1089	1/1:21,0:18:11.40:86,11,0	0/1:39,4:33:99:133,0,118	0/1:14,0:11:0.37:5,0,0	1/1:8,0:6:2.90:16,3,0
chr10	68382270	.	G	GTA	532.05	PASS	AB=0.958;AC=16;AF=0.320;AN=50;BaseQRankSum=6.390;DP=901;FS=4.073;HRun=0;HaplotypeScore=178.8713;InbreedingCoeff=0.0077;MQ=32.48;MQ0=102;MQRankSum=-6.642;QD=1.27;ReadPosRankSum=-2.878;VQSLOD=1.9734;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:59,0:57:99:0,105,1353	0/1:18,0:17:9.33:27,0,9	./.	./.	0/0:31,0:28:45.93:0,46,541	0/0:17,7:19:0.11:0,0,1	0/1:42,0:28:37.11:37,0,39	0/1:53,0:6:3.36:3,0,26	0/0:39,0:38:84.07:0,84,982	0/1:50,0:35:99:167,0,216	0/0:21,1:16:3:0,3,25	1/1:34,5:25:3.47:26,3,0	0/0:30,0:25:60.55:0,61,791	./.	0/0:34,6:36:2.50:0,3,16	1/1:33,4:26:5.03:31,5,0	0/1:26,0:21:36.44:36,0,100	0/1:19,0:17:36.80:38,0,37	0/1:23,1:12:58.93:59,0,80	0/0:27,5:25:5.01:0,5,47	0/0:60,1:49:2.97:0,3,20	0/0:35,2:31:2.97:0,3,20	0/0:26,0:23:45.03:0,45,533	0/0:59,0:51:84.23:0,84,1121	0/1:22,5:21:0.01:0,0,0	0/1:52,2:39:99:146,0,232	0/1:13,4:15:2.73:63,0,3	1/1:8,4:9:3.01:36,3,0
chr10	68382282	.	GTA	G	537.91	PASS	AB=0.992;AC=20;AF=0.400;AN=50;BaseQRankSum=6.876;DP=1022;FS=23.244;HRun=0;HaplotypeScore=162.1644;InbreedingCoeff=-0.0756;MQ=29.90;MQ0=160;MQRankSum=-5.909;QD=0.84;ReadPosRankSum=-2.651;VQSLOD=0.9049;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:52:56.82:0,57,1263	0/1:20,0:19:10.11:27,0,10	./.	./.	0/1:31,0:25:4.84:5,0,496	0/0:20,0:15:0.47:0,0,1	0/1:43,1:29:22.76:23,0,29	1/1:64,0:7:14.82:102,15,0	0/1:39,0:36:2.16:2,0,807	0/1:66,0:43:99:203,0,136	1/1:27,1:19:2.61:24,3,0	0/0:47,0:29:5.88:0,6,36	0/0:42,0:29:33.38:0,33,865	./.	0/1:44,0:36:0.13:0,0,0	0/1:33,0:21:0:0,0,0	0/1:21,0:15:6.31:56,0,6	0/1:18,1:14:8.91:31,0,9	0/1:28,0:15:9.90:10,0,171	0/0:33,0:23:2.03:0,2,38	0/0:69,1:48:2.81:0,3,17	1/1:52,0:41:3:25,3,0	0/1:25,1:20:36.95:37,0,355	0/0:66,0:57:49.29:0,49,1255	0/1:33,0:25:0.04:0,0,0	0/1:66,0:44:89.02:89,0,407	0/1:28,0:24:36.51:37,0,50	0/0:17,0:12:5.84:0,6,38
chr10	68382286	.	GTGTA	G	704.52	PASS	AB=0.920;AC=17;AF=0.354;AN=48;BaseQRankSum=5.618;DP=1120;FS=2.095;HRun=0;HaplotypeScore=189.6773;InbreedingCoeff=0.1708;MQ=29.31;MQ0=166;MQRankSum=-4.816;QD=1.40;ReadPosRankSum=-1.413;VQSLOD=2.6200;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:54:41.53:0,42,1689	0/1:17,3:19:11.38:11,0,47	./.	./.	0/0:30,0:24:40.69:0,41,923	0/0:22,1:18:3.42:0,3,21	1/1:45,5:33:2.51:15,3,0	1/1:66,0:7:11.67:64,12,0	0/0:41,0:37:12.10:0,12,1279	0/1:68,7:53:99:359,0,706	1/1:25,6:21:0.47:1,0,0	0/0:50,3:33:8.96:0,9,118	0/0:45,0:32:50.36:0,50,1386	./.	0/0:42,7:40:0.37:0,0,1	0/1:41,5:29:0.01:0,0,1	1/1:18,3:13:14.50:112,15,0	0/1:22,0:16:22.54:39,0,23	0/1:29,3:18:96.11:96,0,289	0/0:30,6:26:3.01:0,3,64	0/0:70,7:51:3.33:0,3,26	./.	0/0:27,0:20:22.54:0,23,676	0/0:70,0:61:81.81:0,82,2126	1/1:35,1:28:1.14:2,1,0	0/1:70,3:49:67.48:67,0,793	0/1:26,4:27:75.64:76,0,188	0/0:17,0:12:6.02:0,6,104
chr10	68382312	.	ATG	A	57.64	PASS	AB=0.950;AC=7;AF=0.146;AN=48;BaseQRankSum=5.184;DP=1363;FS=7.987;HRun=0;HaplotypeScore=194.8071;InbreedingCoeff=0.1203;MQ=28.20;MQ0=182;MQRankSum=-3.067;QD=0.18;ReadPosRankSum=-1.019;VQSLOD=1.7203;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:61,0:59:88:0,88,1432	0/0:22,3:24:4.88:0,5,61	./.	./.	0/0:32,0:24:39.12:0,39,638	0/0:23,0:20:1.80:0,2,5	0/0:54,1:38:6.07:0,6,48	0/1:92,5:33:58.25:58,0,682	0/0:36,0:32:62.79:0,63,996	0/0:102,2:73:3.48:0,3,1834	./.	0/0:59,1:44:14.26:0,14,211	0/0:43,0:26:66.21:0,66,1101	0/0:48,2:36:0.47:0,0,1	0/1:53,3:45:0.42:0,0,1	0/1:49,4:39:33.95:34,0,46	0/0:23,1:17:8.48:0,8,191	0/1:30,1:26:46.65:47,0,191	0/0:39,1:20:17.10:0,17,459	1/1:44,3:33:2.04:6,2,0	0/0:91,3:65:3.01:0,3,39	./.	0/0:30,0:21:39.13:0,39,668	0/0:74,0:64:99:0,102,1719	0/0:45,3:41:0.82:0,1,2	0/0:87,4:63:26.66:0,27,1218	0/1:32,2:30:18.57:19,0,487	0/0:20,0:16:10.75:0,11,182
chr10	68382324	.	GTA	G	1333.84	PASS	AB=0.899;AC=20;AF=0.417;AN=48;BaseQRankSum=6.286;DP=1350;FS=54.205;HRun=0;HaplotypeScore=186.7412;InbreedingCoeff=0.0186;MQ=28.31;MQ0=176;MQRankSum=-8.068;QD=1.52;ReadPosRankSum=-2.095;VQSLOD=0.5571;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:59,0:57:98.84:0,99,1727	0/1:26,2:24:26.90:40,0,27	./.	./.	0/0:27,0:21:38.79:0,39,672	1/1:29,2:23:2.19:11,2,0	0/0:47,7:39:16.71:0,17,140	0/1:73,19:41:99:639,0,616	0/0:38,0:33:71.17:0,71,1283	0/1:94,10:72:99:356,0,1216	./.	0/1:57,6:46:45.78:46,0,119	0/0:42,0:26:43.68:0,44,1062	1/1:45,6:36:2.90:46,3,0	1/1:55,5:47:2.85:18,3,0	0/1:55,6:43:15.74:16,0,78	0/0:24,0:17:10.89:0,11,136	0/1:31,2:28:54.05:54,0,235	0/1:34,2:20:54.84:55,0,315	0/1:43,11:39:0:0,0,0	1/1:91,2:60:1.20:3,1,0	./.	0/0:27,0:18:25.35:0,25,696	0/0:72,0:63:97.49:0,97,1989	1/1:43,10:43:5.47:63,5,0	0/1:77,5:54:80.92:81,0,873	0/1:28,7:29:52.77:53,0,357	0/0:18,0:14:14.81:0,15,128
chr10	68382332	.	A	ATG	1136.98	PASS	AB=0.872;AC=15;AF=0.300;AN=50;BaseQRankSum=2.139;DP=1460;FS=12.346;HRun=0;HaplotypeScore=204.8706;InbreedingCoeff=0.0673;MQ=27.87;MQ0=195;MQRankSum=-7.579;QD=1.56;ReadPosRankSum=0.060;VQSLOD=1.7825;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:60,0:58:84.47:0,84,1048	0/0:24,3:24:6.74:0,7,68	./.	./.	0/0:27,0:22:33.02:0,33,426	1/1:30,2:27:2.40:7,2,0	0/1:52,5:42:44.03:44,0,76	0/0:124,0:58:95.84:0,96,1099	0/0:44,0:38:75:0,75,955	0/1:91,12:72:99:460,0,675	0/1:32,8:31:0:0,0,0	0/1:59,8:49:33.08:33,0,147	0/0:42,0:27:59.45:0,59,755	0/0:44,7:37:2.91:0,3,35	0/0:57,8:54:1.99:0,2,15	0/1:54,12:51:24.07:24,0,103	1/1:19,4:16:3.74:38,4,0	0/0:34,0:29:30.26:0,30,483	0/1:28,10:20:99:305,0,165	0/1:53,9:47:0.04:0,0,0	1/1:88,8:59:3.03:10,3,0	./.	0/0:28,0:19:42.05:0,42,521	0/0:72,0:62:99:0,111,1397	0/0:42,9:44:5.69:0,6,52	0/1:75,10:57:99:216,0,958	0/1:31,6:30:99:135,0,227	0/0:18,1:14:12.19:0,12,108
chr10	68382342	.	A	ATG	472.23	PASS	AB=0.977;AC=13;AF=0.260;AN=50;BaseQRankSum=5.052;DP=1484;FS=1.986;HRun=0;HaplotypeScore=200.8442;InbreedingCoeff=-0.0259;MQ=27.91;MQ0=195;MQRankSum=-6.379;QD=0.76;ReadPosRankSum=1.723;VQSLOD=2.9258;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:62,0:59:87.78:0,88,1059	0/0:29,0:25:6.67:0,7,79	./.	./.	0/0:26,0:22:32.91:0,33,404	0/0:36,0:27:2.29:0,2,27	0/1:63,0:45:15.06:15,0,107	0/0:124,0:56:95.93:0,96,1138	0/0:43,0:37:78:0,78,985	0/1:94,9:67:99:437,0,722	0/1:44,1:30:0:0,0,0	0/1:67,1:49:9.42:9,0,135	0/0:45,0:31:59.88:0,60,692	0/0:54,1:40:2.91:0,3,38	1/1:66,1:54:0.04:1,0,0	0/0:69,0:53:8.50:0,9,110	1/1:22,0:15:0.63:2,1,0	0/0:34,0:28:26.19:0,26,365	0/1:41,0:19:54.86:55,0,185	0/1:58,2:45:0.04:0,0,0	0/1:89,0:54:27.65:30,0,28	./.	0/0:29,0:20:27.09:0,27,351	0/0:72,2:64:99:0,110,1344	0/0:56,0:48:2.42:0,2,38	0/0:86,0:60:34.07:0,34,1117	0/1:39,0:32:26.46:26,0,288	0/1:20,0:16:15.59:16,0,76
chr10	68382352	.	A	ATG	130.34	PASS	AB=0.963;AC=10;AF=0.185;AN=54;BaseQRankSum=4.042;DP=1509;FS=0.000;HRun=0;HaplotypeScore=213.4536;InbreedingCoeff=-0.0060;MQ=27.96;MQ0=193;MQRankSum=-5.120;QD=0.28;ReadPosRankSum=-0.575;VQSLOD=2.5464;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:64,0:60:79.07:0,79,994	0/0:27,1:24:6.67:0,7,79	0/0:22,0:6:8.98:0,9,88	0/0:29,0:2:3.01:0,3,36	0/0:28,0:25:36.01:0,36,437	0/0:36,2:29:2.29:0,2,31	0/0:70,0:50:14.04:0,14,161	0/0:107,0:44:74.47:0,74,843	0/0:44,0:37:84.04:0,84,1079	0/0:95,0:63:4.96:0,5,819	0/1:44,0:28:0:0,0,0	0/1:66,3:50:30.24:30,0,153	0/0:47,0:33:71.90:0,72,856	0/0:48,7:41:3.38:0,3,39	1/1:66,1:54:0.11:1,0,0	0/0:64,6:52:9.52:0,10,107	0/0:21,2:17:0.05:0,0,1	0/1:32,0:27:16.62:17,0,177	0/1:41,1:19:18.34:18,0,245	0/1:59,1:46:0.04:0,0,0	0/1:83,0:49:27.47:30,0,27	./.	0/0:25,0:17:29.99:0,30,346	0/0:79,0:69:99:0,108,1344	0/0:55,4:51:2.42:0,2,37	0/0:85,3:61:50.43:0,50,1005	0/1:36,4:33:57.34:57,0,298	0/1:19,3:17:52.72:92,0,53
chr10	68382370	.	GTA	G	82.71	PASS	AB=0.978;AC=13;AF=0.232;AN=56;BaseQRankSum=7.344;DP=1273;FS=6.399;HRun=0;HaplotypeScore=198.6147;InbreedingCoeff=0.1729;MQ=29.21;MQ0=146;MQRankSum=-5.924;QD=0.19;ReadPosRankSum=0.742;VQSLOD=2.2268;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:62,0:58:99:0,102,1813	0/1:22,1:19:0.50:0,0,13	0/0:36,0:7:20.96:0,21,333	0/0:48,0:4:11.97:0,12,148	0/1:25,0:24:8.97:9,0,585	0/0:29,4:25:1.81:0,2,7	0/0:59,0:41:15.03:0,15,124	0/0:79,0:25:27.73:0,28,415	0/0:48,0:41:90.98:0,91,1409	0/0:70,0:50:21.18:0,21,488	0/1:36,0:23:0.13:0,0,0	0/1:55,5:46:8.03:8,0,15	0/0:37,0:32:42.99:0,43,1054	0/0:50,0:39:5.54:0,6,28	1/1:51,2:43:1.39:4,1,0	0/1:50,1:41:1.06:1,0,69	0/0:21,0:18:4.08:0,4,51	0/1:27,0:22:27.25:27,0,93	0/0:37,0:17:21.30:0,21,149	0/0:38,3:34:0:0,0,0	0/0:70,0:41:2.80:0,3,13	0/1:49,1:36:0:0,0,0	0/0:23,0:16:32:0,32,456	0/0:65,0:60:99:0,107,1916	0/0:47,1:44:0.88:0,1,2	0/1:66,1:50:65.32:65,0,242	0/1:35,1:30:20.82:21,0,108	1/1:17,0:13:9.89:69,10,0
chr10	68382372	.	ATGTG	A	1539	PASS	AB=0.897;AC=20;AF=0.357;AN=56;BaseQRankSum=8.348;DP=1229;FS=1.840;HRun=0;HaplotypeScore=206.5153;InbreedingCoeff=0.1504;MQ=29.72;MQ0=133;MQRankSum=-8.772;QD=2.22;ReadPosRankSum=1.305;VQSLOD=2.8677;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:62,0:58:99:0,102,2437	1/1:17,3:17:1.64:51,2,0	0/0:36,0:7:20.86:0,21,386	0/0:48,0:4:12.04:0,12,245	0/0:27,0:27:49.92:0,50,1023	0/1:28,5:25:0.01:0,0,0	0/0:43,14:40:5.19:0,5,81	0/1:78,1:25:0.07:0,0,229	0/0:47,0:40:81.25:0,81,1847	0/1:59,4:47:99:317,0,201	0/1:28,8:23:0:0,0,0	1/1:49,9:45:0.93:195,1,0	0/0:34,0:32:65.47:0,65,1417	1/1:39,11:40:2.90:43,3,0	0/0:43,10:44:3.20:0,3,15	0/1:42,9:42:65.57:92,0,66	0/1:17,4:18:45.94:46,0,46	0/1:28,0:23:33.77:34,0,44	0/1:32,2:17:39.32:130,0,39	0/0:29,11:33:0:0,0,0	0/1:60,5:38:0:0,0,0	0/1:36,8:34:0:0,0,0	0/0:19,0:15:32.85:0,33,663	0/0:66,0:61:99:0,105,2430	0/0:34,11:42:2.77:0,3,14	0/1:55,7:48:71.03:521,0,71	0/1:27,6:27:3.12:128,0,3	1/1:13,2:11:11.78:121,12,0
chr10	68382381	.	TGTGTAC	T	1825.49	PASS	AB=0.968;AC=26;AF=0.464;AN=56;BaseQRankSum=10.867;DP=1033;FS=17.580;HRun=0;HaplotypeScore=194.5521;InbreedingCoeff=0.2528;MQ=31.39;MQ0=91;MQRankSum=-8.978;QD=3.03;ReadPosRankSum=-1.795;VQSLOD=1.3379;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:59,0:57:83.49:0,83,2915	1/1:19,0:15:1.34:14,1,0	0/0:36,0:7:20.96:0,21,270	0/0:48,0:4:12.04:0,12,181	0/0:25,0:25:24.35:0,24,1305	1/1:34,0:26:1.21:3,1,0	0/1:49,0:35:6.13:6,0,58	0/1:43,0:7:23.18:23,0,227	0/0:45,0:39:54.26:0,54,2177	0/1:43,7:39:23.61:668,0,24	0/0:24,4:20:0:0,0,0	1/1:45,1:40:11.54:107,12,0	0/0:32,0:30:57.20:0,57,1420	0/1:44,0:38:15.22:15,0,27	1/1:41,0:38:2.32:17,2,0	0/1:48,0:39:48.37:48,0,89	0/1:19,1:18:16.30:26,0,16	1/1:18,1:18:18.37:138,18,0	0/1:26,1:13:51.71:104,0,52	0/0:36,0:31:0:0,0,0	1/1:52,2:36:1.13:3,1,0	1/1:30,0:24:5.98:55,6,0	0/0:20,0:17:8.55:0,9,640	0/0:63,0:60:99:0,103,3080	0/0:37,1:37:0.67:0,1,2	1/1:46,0:34:12.77:501,13,0	1/1:20,0:17:17.79:184,18,0	0/1:10,0:7:3.08:80,0,3
chr10	68382383	.	TGTAC	T	2016.02	PASS	AB=0.884;AC=26;AF=0.481;AN=54;BaseQRankSum=10.297;DP=960;FS=25.306;HRun=0;HaplotypeScore=175.1572;InbreedingCoeff=0.1048;MQ=31.81;MQ0=77;MQRankSum=-8.482;QD=3.66;ReadPosRankSum=-1.168;VQSLOD=0.8476;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:55:58.57:0,59,2544	1/1:13,5:14:1.76:15,2,0	0/0:36,0:7:21.06:0,21,366	0/0:48,0:4:12.04:0,12,191	0/1:23,0:24:12.35:12,0,1117	1/1:22,9:25:0.90:3,1,0	0/1:41,4:32:5.96:6,0,84	0/1:32,2:5:42.04:42,0,248	0/0:43,1:39:54.70:0,55,1925	0/1:46,0:38:99:488,0,108	./.	1/1:32,10:37:11.36:70,11,0	0/0:29,0:28:3.22:0,3,1189	0/1:31,9:36:20.37:20,0,27	1/1:26,10:33:2.29:18,2,0	0/1:30,14:39:70.65:71,0,78	0/1:17,2:18:10.52:11,0,35	1/1:18,1:18:5.66:233,6,0	0/1:21,2:11:56.92:95,0,57	0/1:25,9:30:0:0,0,0	0/0:50,1:37:0.47:0,0,1	1/1:18,9:22:5.98:56,6,0	0/0:18,0:15:5.57:0,6,585	0/0:62,0:60:99:0,102,2627	0/0:29,8:36:0.94:0,1,3	0/1:31,10:30:3.19:657,0,3	1/1:12,7:16:0.91:243,1,0	1/1:5,3:6:10.06:131,10,0
chr10	68382384	.	GTACA	G	1960.93	PASS	AB=0.978;AC=25;AF=0.463;AN=54;BaseQRankSum=8.708;DP=921;FS=21.615;HRun=0;HaplotypeScore=164.2728;InbreedingCoeff=0.0917;MQ=32.09;MQ0=73;MQRankSum=-7.687;QD=3.40;ReadPosRankSum=-2.213;VQSLOD=0.7170;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:54:99:0,101,2315	0/0:18,0:14:1.11:0,1,4	0/0:36,0:7:20.96:0,21,237	0/0:48,0:4:12.02:0,12,138	0/0:23,0:23:5.61:0,6,1017	0/1:27,1:23:0:1,0,0	0/1:45,0:32:8.13:8,0,67	0/1:31,1:5:23.12:23,0,183	0/0:42,0:37:67.39:0,67,1749	1/1:37,4:34:1.05:783,1,0	./.	1/1:40,1:36:5.94:47,6,0	0/1:27,1:27:46.30:46,0,1066	0/1:38,0:34:5.93:6,0,34	1/1:34,0:31:0.11:1,0,0	0/1:41,0:36:47.06:47,0,65	0/1:18,1:18:7.07:16,0,7	1/1:16,0:16:17.63:203,18,0	0/1:22,0:11:69.45:81,0,69	0/1:33,1:30:0:0,0,0	0/1:40,1:34:0:0,0,0	1/1:26,0:21:6.02:103,6,0	0/1:18,0:15:3.62:4,0,536	0/0:60,1:60:99:0,106,2471	0/0:33,2:33:0.77:0,1,2	0/1:39,0:29:15.57:492,0,16	1/1:20,0:17:14.72:177,15,0	0/1:8,0:6:5.63:69,0,6
chr10	68382385	.	TAC	T	1133.10	PASS	AB=0.939;AC=23;AF=0.426;AN=54;BaseQRankSum=9.151;DP=849;FS=44.156;HRun=0;HaplotypeScore=144.3571;InbreedingCoeff=0.0002;MQ=32.69;MQ0=65;MQRankSum=-6.112;QD=2.35;ReadPosRankSum=-2.224;VQSLOD=0.7799;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:54,1:53:34.27:0,34,1342	0/0:16,1:13:3.34:0,3,19	0/0:36,0:7:18.68:0,19,141	0/0:48,0:4:11.32:0,11,74	0/1:23,0:23:24:24,0,665	0/1:19,6:22:0:1,0,0	0/1:42,2:31:24.87:25,0,48	0/1:24,2:5:16.59:17,0,134	0/0:38,2:35:47.85:0,48,1038	1/1:29,5:29:0.61:337,1,0	0/0:19,2:18:0:0,0,0	0/1:30,7:32:21.24:27,0,21	0/1:26,0:25:21.55:22,0,630	0/1:35,0:31:4.24:4,0,27	1/1:27,4:29:2.86:18,3,0	0/1:36,1:32:20.35:20,0,54	0/1:15,1:16:0.03:0,0,6	1/1:12,2:13:17.41:184,17,0	0/1:18,1:9:46.20:46,0,79	0/1:28,5:29:0:0,0,0	./.	1/1:24,1:20:6.02:79,6,0	0/0:16,1:15:2.48:0,2,349	0/0:55,3:56:54.89:0,55,1484	0/0:31,1:30:0.47:0,0,1	0/1:29,2:25:99:293,0,109	1/1:17,1:15:10.61:121,11,0	0/1:8,0:6:31.73:62,0,32
chr10	68382386	.	ACATG	A	1183.86	PASS	AB=0.992;AC=20;AF=0.385;AN=52;BaseQRankSum=9.023;DP=833;FS=39.007;HRun=0;HaplotypeScore=153.1126;InbreedingCoeff=0.0314;MQ=32.73;MQ0=64;MQRankSum=-6.559;QD=2.82;ReadPosRankSum=-2.188;VQSLOD=0.8709;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:54,1:53:99:0,113,1904	0/0:16,0:13:3.34:0,3,20	0/0:37,0:7:19.66:0,20,150	0/0:49,0:4:11.32:0,11,74	0/1:23,0:23:7.47:7,0,917	0/1:25,0:22:0:0,0,0	0/1:40,0:29:24.75:25,0,48	0/1:24,0:5:22.50:22,0,131	0/0:39,0:34:71.30:0,71,1435	0/1:34,0:29:4.37:469,0,4	./.	0/1:37,0:32:3.56:4,0,22	0/1:24,2:25:48.79:49,0,907	0/0:34,0:31:0.03:0,0,28	1/1:31,0:29:2.66:15,3,0	0/1:36,0:31:20.49:20,0,47	0/0:15,0:15:1.07:0,1,4	1/1:11,2:13:16.45:163,16,0	0/1:17,0:8:46.46:46,0,82	0/1:32,0:28:0:0,0,0	./.	1/1:25,0:20:5.99:57,6,0	0/0:16,0:14:15.24:0,15,521	0/0:56,0:54:85.26:0,85,2108	0/0:32,0:30:0.47:0,0,2	0/1:30,0:26:90.82:272,0,91	1/1:16,0:13:9.12:116,9,0	0/1:8,0:6:25.68:63,0,26
chr10	68382388	.	ATGTGTG	A	526.11	PASS	AB=0.959;AC=21;AF=0.404;AN=52;BaseQRankSum=3.020;DP=866;FS=4.745;HRun=0;HaplotypeScore=173.8731;InbreedingCoeff=0.4803;MQ=32.37;MQ0=65;MQRankSum=-4.931;QD=1.67;ReadPosRankSum=-2.018;VQSLOD=2.3867;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:53:75.43:0,75,1643	1/1:13,3:12:1.64:17,2,0	./.	0/0:53,0:5:3.01:0,3,66	0/0:22,1:23:39.58:0,40,975	0/0:22,4:24:1.23:0,1,2	1/1:37,4:29:1.82:20,2,0	1/1:27,0:6:5.98:67,6,0	0/0:39,0:37:60.12:0,60,1174	0/0:35,0:30:32.82:0,33,222	0/0:23,0:18:0:0,0,0	1/1:36,5:36:4.56:96,5,0	0/0:25,0:27:43.33:0,43,861	1/1:28,6:31:2.63:52,3,0	0/0:26,6:30:3.69:0,4,18	0/1:31,5:31:0.47:0,0,1	1/1:8,5:14:6.02:123,6,0	0/0:15,0:13:5.70:0,6,29	0/1:18,0:8:0:0,0,0	0/0:30,1:28:0:0,0,1	./.	1/1:20,4:20:6.02:79,6,0	0/0:14,0:13:20.23:0,20,533	0/0:54,0:57:87.03:0,87,2027	0/0:28,2:28:0.47:0,0,2	0/1:33,0:30:47.72:145,0,48	1/1:15,4:16:2.06:60,2,0	1/1:8,0:6:2.04:6,2,0
chr10	68382395	.	T	TAC	47.38	PASS	AB=0.990;AC=10;AF=0.179;AN=56;BaseQRankSum=3.175;DP=882;FS=3.718;HRun=0;HaplotypeScore=162.1052;InbreedingCoeff=0.1083;MQ=32.93;MQ0=66;MQRankSum=-4.064;QD=0.15;ReadPosRankSum=-2.805;VQSLOD=2.2493;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:56:99:0,123,1690	0/0:15,0:12:2.31:0,2,36	0/0:42,0:4:12.04:0,12,173	0/0:52,0:6:15.05:0,15,221	0/0:25,0:25:57.16:0,57,837	0/1:27,0:24:0.39:0,0,0	0/1:38,1:29:29.59:31,0,30	0/1:32,0:14:33.59:34,0,150	0/0:45,0:40:80.73:0,81,1107	0/1:33,0:29:1.88:2,0,320	0/0:22,0:17:0:0,0,0	0/1:39,0:33:20.79:21,0,63	0/0:29,0:29:66.15:0,66,934	0/0:35,0:30:5.35:0,5,28	0/0:33,0:32:2.88:0,3,14	0/0:34,0:30:8.60:0,9,71	0/0:17,1:17:9.31:0,9,84	0/0:17,0:15:20.48:0,20,155	0/0:19,0:7:12.79:0,13,131	0/1:32,0:27:0:0,0,0	1/1:48,0:37:0.47:1,0,0	0/0:25,0:21:1.93:0,2,49	0/0:15,0:13:27.06:0,27,407	0/0:59,0:57:99:0,114,1619	0/1:29,0:27:0.02:1,0,0	0/1:32,2:31:63.70:64,0,284	0/0:19,0:16:11.87:0,12,63	0/0:7,0:5:6.60:0,7,49
chr10	68383527	.	TGTGGAA	T	19253.95	PASS	AB=0.568;AC=31;AF=0.554;AN=56;BaseQRankSum=15.364;DP=673;FS=2.634;HRun=0;HaplotypeScore=184.5909;InbreedingCoeff=0.9238;MQ=63.95;MQ0=0;MQRankSum=-18.754;QD=52.32;ReadPosRankSum=0.502;VQSLOD=4.5867;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,108,3721	1/1:0,6:6:15.05:359,15,0	0/0:15,0:15:45.07:0,45,1462	0/0:19,0:16:36.58:0,37,1069	0/0:26,0:26:69.24:0,69,2397	1/1:3,15:18:42.14:1007,42,0	1/1:5,25:30:48.16:1130,48,0	0/0:35,0:35:96.32:0,96,3209	0/0:26,0:26:78.27:0,78,2749	0/0:24,0:24:72.24:0,72,2469	0/0:18,0:17:48.09:0,48,1450	1/1:2,27:29:72.25:1719,72,0	0/0:38,0:38:99:0,111,3972	1/1:5,31:35:90.31:2149,90,0	1/1:1,37:38:99:2503,105,0	1/1:1,32:33:87.30:2082,87,0	1/1:3,18:20:29.76:716,30,0	0/0:11,0:11:24.08:0,24,808	1/1:3,21:24:63.19:1378,63,0	1/1:2,10:12:27.09:643,27,0	1/1:6,23:28:27.98:696,28,0	1/1:1,18:19:39.13:936,39,0	0/0:23,0:23:63.22:0,63,2255	0/0:31,0:31:93.32:0,93,3210	1/1:4,17:21:36.12:864,36,0	0/1:6,19:25:99:1303,0,258	1/1:5,16:21:57.20:1336,57,0	1/1:0,6:6:18.06:432,18,0
chr10	68383588	.	ATC	A	3466.42	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=14.888;DP=650;FS=17.783;HRun=0;HaplotypeScore=173.9458;InbreedingCoeff=0.9641;MQ=80.08;MQ0=1;MQRankSum=-7.184;QD=8.67;ReadPosRankSum=-0.011;VQSLOD=1.8771;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,111,1719	1/1:8,0:8:20.89:101,21,0	0/0:48,0:39:64.83:0,65,736	0/0:38,0:35:26.09:0,26,602	0/0:19,0:19:48.16:0,48,786	1/1:15,1:16:29.97:146,30,0	1/1:22,0:22:40.18:152,40,0	1/1:39,1:39:32.67:336,33,0	0/0:24,0:24:54.09:0,54,728	1/1:26,0:26:57.67:251,58,0	1/1:22,0:22:53.03:198,53,0	1/1:26,1:27:52.25:225,52,0	0/0:25,0:25:63.20:0,63,995	1/1:20,1:20:41.75:209,42,0	1/1:27,2:29:58.38:306,58,0	1/1:24,1:25:4.38:195,4,0	1/1:23,0:22:45.11:179,45,0	1/1:13,0:13:24.71:85,25,0	1/1:18,0:17:33.43:156,33,0	1/1:11,0:11:23.15:99,23,0	1/1:20,1:20:24.68:175,25,0	1/1:9,0:9:15.44:63,15,0	0/0:22,0:22:51.11:0,51,775	0/0:25,0:25:60.17:0,60,921	1/1:13,1:14:28.66:145,29,0	1/1:20,0:20:34.96:140,35,0	1/1:29,0:29:66.88:272,67,0	1/1:6,0:6:9.73:33,10,0
chr10	68383599	.	TC	T	12475.23	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=11.102;DP=615;FS=12.407;HRun=1;HaplotypeScore=118.5915;InbreedingCoeff=0.9951;MQ=77.99;MQ0=4;MQRankSum=-6.774;QD=32.07;ReadPosRankSum=1.165;VQSLOD=3.2307;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,117,1510	1/1:4,5:9:26.97:300,27,0	0/0:44,0:33:71.23:0,71,741	0/0:36,0:30:49.26:0,49,641	0/0:17,0:17:51.16:0,51,692	1/1:3,9:12:35.82:443,36,0	1/1:6,16:22:51.13:675,51,0	1/1:3,30:31:87.15:975,87,0	0/0:20,0:20:57.08:0,57,672	1/1:0,27:27:74.28:947,74,0	1/1:1,24:25:72:900,72,0	1/1:4,22:26:71.93:914,72,0	0/0:24,0:24:72.18:0,72,913	1/1:6,13:18:50.77:591,51,0	1/1:10,18:27:74.67:830,75,0	1/1:7,19:25:23.98:715,24,0	1/1:3,19:22:60.15:779,60,0	1/1:0,12:12:33.11:450,33,0	1/1:5,11:15:43.81:492,44,0	1/1:3,9:12:31.25:360,31,0	1/1:9,12:20:28.95:571,29,0	1/1:3,5:8:18.02:229,18,0	0/0:20,0:20:57.08:0,57,696	0/0:23,0:23:69.15:0,69,861	1/1:8,8:16:38.77:443,39,0	1/1:4,15:19:31.19:631,31,0	1/1:4,26:30:80.63:1034,81,0	1/1:2,4:6:15.05:198,15,0
chr10	68383837	.	C	CT	2636.30	PASS	AB=0.598;AC=32;AF=0.571;AN=56;BaseQRankSum=-0.480;DP=490;FS=1.086;HRun=4;HaplotypeScore=89.5630;InbreedingCoeff=0.6110;MQ=65.07;MQ0=17;MQRankSum=-1.553;QD=9.52;ReadPosRankSum=-0.415;VQSLOD=0.4925;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:13.17:0,13,354	1/1:4,4:8:9.50:123,10,0	0/0:41,0:19:4.29:0,4,261	0/0:64,0:24:0.14:0,0,142	0/0:17,0:16:33.63:0,34,253	1/1:3,12:15:18.02:220,18,0	1/1:7,0:6:7.67:47,8,0	0/0:0,0:15:10.14:0,10,37	0/0:14,0:13:22.27:0,22,212	1/1:14,8:21:21.99:373,22,0	1/1:6,11:16:18.38:190,18,0	0/1:6,12:18:4.51:144,0,5	0/0:8,0:8:19.25:0,19,182	0/1:5,8:13:7.05:70,0,7	0/1:5,9:13:4.58:101,0,5	0/1:4,14:17:2.12:37,0,2	1/1:18,7:20:26.14:273,26,0	0/0:1,0:5:6.11:0,6,18	1/1:5,14:19:40.98:412,41,0	1/1:14,3:17:16.01:167,16,0	1/1:6,1:7:6.32:46,6,0	1/1:5,4:9:11.59:108,12,0	0/0:12,0:10:15.51:0,16,169	0/0:14,0:14:21.60:0,22,236	1/1:8,11:19:3.59:64,4,0	1/1:16,4:20:14.15:235,14,0	1/1:16,3:19:10.36:142,10,0	1/1:3,7:9:6.02:79,6,0
chr10	68384593	.	A	AT	4380.50	PASS	AB=0.969;AC=37;AF=0.661;AN=56;BaseQRankSum=1.824;DP=348;FS=22.494;HRun=7;HaplotypeScore=60.6016;InbreedingCoeff=0.8272;MQ=74.56;MQ0=4;MQRankSum=-3.456;QD=20.66;ReadPosRankSum=2.975;VQSLOD=3.3653;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:33.03:0,33,313	1/1:0,3:3:9.03:109,9,0	0/1:57,1:26:21.51:22,0,216	0/0:58,1:22:23.57:0,24,202	0/0:15,0:15:32.96:0,33,302	1/1:2,13:14:32.92:379,33,0	1/1:0,3:3:9.03:109,9,0	0/0:19,0:19:51.02:0,51,477	0/0:2,0:2:6.01:0,6,58	1/1:6,8:14:21.06:253,21,0	1/1:0,8:8:24.07:290,24,0	1/1:1,4:5:12.04:145,12,0	0/0:5,0:5:15.02:0,15,145	1/1:1,4:5:11.97:126,12,0	1/1:0,6:6:18.06:217,18,0	1/1:1,9:10:27.08:325,27,0	1/1:4,6:10:15.04:181,15,0	0/0:7,0:7:15.02:0,15,145	1/1:1,7:8:24.04:265,24,0	1/1:0,7:7:21.06:253,21,0	1/1:0,1:1:3.01:36,3,0	1/1:0,8:8:24.07:290,24,0	0/0:7,0:7:12.02:0,12,116	0/0:6,0:6:9.01:0,9,87	1/1:1,12:13:36.11:434,36,0	1/1:2,8:10:24.07:289,24,0	1/1:1,12:13:27.08:326,27,0	1/1:1,9:10:29.12:331,29,0
chr10	68384629	.	AT	A	678.10	PASS	AB=0.832;AC=26;AF=0.591;AN=44;BaseQRankSum=4.476;DP=310;FS=2.089;HRun=10;HaplotypeScore=70.8170;InbreedingCoeff=0.4680;MQ=60.22;MQ0=11;MQRankSum=-3.027;QD=3.92;ReadPosRankSum=1.635;VQSLOD=0.1401;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:8:15.03:0,15,157	1/1:0,1:2:5.81:34,6,0	0/0:90,0:15:3.48:0,3,102	0/1:100,2:20:2.71:3,0,28	0/0:8,0:8:14.25:0,14,140	1/1:2,4:6:11.21:84,11,0	./.	0/0:10,0:11:11.39:0,11,57	./.	1/1:8,0:8:2.60:8,3,0	0/0:4,0:4:1.36:0,1,3	1/1:0,1:1:3:26,3,0	0/0:3,0:3:3.01:0,3,33	./.	./.	1/1:2,2:4:6:51,6,0	0/1:5,3:9:7.96:71,0,8	1/1:3,0:3:5.91:39,6,0	1/1:0,1:1:3:26,3,0	1/1:2,2:4:5.99:51,6,0	0/0:5,0:4:0:0,0,0	./.	0/0:4,0:4:6.02:0,6,66	./.	1/1:3,5:9:17.57:137,18,0	1/1:0,7:7:21:180,21,0	1/1:2,1:3:2.99:26,3,0	1/1:8,3:11:3.84:87,4,0
chr10	68384639	.	TAG	T	1231.57	PASS	AB=0.891;AC=37;AF=0.804;AN=46;BaseQRankSum=4.749;DP=269;FS=14.145;HRun=0;HaplotypeScore=69.6400;InbreedingCoeff=0.2667;MQ=64.37;MQ0=13;MQRankSum=-3.397;QD=4.76;ReadPosRankSum=0.693;VQSLOD=1.3378;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:5:11.90:0,12,157	1/1:2,0:2:6.02:76,6,0	0/1:76,4:17:24.52:25,0,60	0/1:84,9:16:25.25:25,0,48	0/1:4,1:5:24.27:24,0,160	1/1:6,0:5:11.97:100,12,0	./.	1/1:4,4:8:2.20:17,2,0	./.	1/1:6,0:6:8.59:76,9,0	1/1:3,0:3:2.92:7,3,0	1/1:1,0:1:2.98:21,3,0	0/0:2,0:2:3.01:0,3,46	./.	1/1:1,0:1:2.98:21,3,0	1/1:3,0:3:8.72:50,9,0	1/1:7,0:7:7.93:92,8,0	1/1:2,0:2:1.14:3,1,0	1/1:3,0:3:8.90:62,9,0	1/1:2,0:2:6.01:57,6,0	1/1:5,0:4:0.89:2,1,0	./.	0/0:2,0:2:6.02:0,6,79	./.	1/1:6,0:6:18.01:164,18,0	1/1:7,0:7:20.86:170,21,0	1/1:2,0:2:5.92:39,6,0	1/1:8,4:12:35.53:333,36,0
chr10	68384640	.	AGTT	A	908.39	PASS	AB=0.858;AC=25;AF=0.543;AN=46;BaseQRankSum=5.178;DP=267;FS=12.190;HRun=0;HaplotypeScore=72.8993;InbreedingCoeff=0.3343;MQ=66.07;MQ0=13;MQRankSum=-3.985;QD=14.42;ReadPosRankSum=0.979;VQSLOD=2.0882;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:3:9.01:0,9,169	1/1:1,0:2:3.48:33,3,0	0/0:80,0:18:0.18:0,0,79	0/0:97,0:17:6.58:0,7,89	0/0:5,0:5:0.91:0,1,150	1/1:5,1:5:11.35:85,11,0	./.	0/0:8,0:8:9.78:0,10,73	./.	1/1:2,3:6:1.40:164,1,0	0/1:2,0:2:6.95:14,0,7	1/1:1,0:1:2.88:15,3,0	0/0:2,0:2:3.01:0,3,73	./.	1/1:0,1:1:3.01:37,3,0	0/1:2,1:3:7.82:30,0,8	0/1:6,1:7:0.93:79,0,1	0/0:2,0:2:0.16:0,0,0	1/1:1,2:3:8.82:86,9,0	1/1:2,0:2:5.97:45,6,0	0/1:5,0:4:0:0,0,0	./.	0/0:2,0:2:6.02:0,6,132	./.	1/1:5,1:6:17.79:130,18,0	1/1:7,0:7:4.21:84,4,0	0/1:1,1:2:2.40:33,0,2	1/1:7,3:10:26.07:209,26,0
chr10	68384652	.	TAG	T	1442.37	PASS	AB=0.830;AC=31;AF=0.738;AN=42;BaseQRankSum=4.101;DP=226;FS=2.240;HRun=0;HaplotypeScore=63.2431;InbreedingCoeff=0.2682;MQ=68.47;MQ0=17;MQRankSum=-3.441;QD=6.77;ReadPosRankSum=1.053;VQSLOD=2.9530;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:3,0:2:6.02:0,6,94	1/1:1,1:2:6.01:68,6,0	0/1:70,6:20:24.59:25,0,62	0/1:75,6:15:52.71:82,0,53	0/1:1,1:2:25.30:25,0,41	1/1:2,4:5:12.04:163,12,0	./.	0/0:5,0:5:9.55:0,10,31	./.	1/1:5,0:5:11.30:120,11,0	./.	1/1:2,1:3:7.98:65,8,0	0/0:2,0:2:3.01:0,3,47	./.	1/1:1,0:1:3.01:32,3,0	1/1:1,1:2:5.88:47,6,0	1/1:6,2:8:13.98:154,14,0	1/1:2,0:2:5.98:46,6,0	1/1:2,1:3:9.03:114,9,0	1/1:0,1:1:3.01:44,3,0	./.	./.	0/0:1,0:1:3.01:0,3,47	./.	1/1:1,2:3:9.03:117,9,0	1/1:0,1:1:3.01:40,3,0	1/1:1,0:1:3:29,3,0	1/1:6,4:10:30.10:407,30,0
chr10	68384653	.	AG	A	775.37	PASS	AB=0.968;AC=31;AF=0.738;AN=42;BaseQRankSum=4.205;DP=223;FS=2.252;HRun=1;HaplotypeScore=63.5646;InbreedingCoeff=0.3196;MQ=68.90;MQ0=17;MQRankSum=-1.154;QD=3.67;ReadPosRankSum=1.602;VQSLOD=0.4776;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:3,0:2:6.02:0,6,95	1/1:1,1:2:5.99:52,6,0	0/1:76,0:20:32.80:53,0,33	0/1:74,6:14:34.38:34,0,41	0/1:2,0:2:2.87:3,0,41	1/1:5,1:5:11.59:78,12,0	./.	0/0:5,0:5:14.94:0,15,118	./.	1/1:2,3:5:7.60:54,8,0	./.	1/1:1,2:3:8.79:64,9,0	0/0:2,0:2:3.01:0,3,48	./.	1/1:0,1:1:2.99:23,3,0	1/1:1,1:2:5.58:34,6,0	1/1:5,3:8:11.54:101,12,0	1/1:1,1:2:6:56,6,0	1/1:1,2:3:8.84:67,9,0	1/1:1,0:1:2.80:13,3,0	./.	./.	0/0:1,0:1:3.01:0,3,48	./.	1/1:2,1:3:8.85:59,9,0	1/1:1,0:1:2.96:19,3,0	1/1:0,1:1:2.98:22,3,0	1/1:7,3:10:28.58:179,29,0
chr10	68384661	.	TA	T	650.87	PASS	AB=0.989;AC=28;AF=0.636;AN=44;BaseQRankSum=4.767;DP=264;FS=6.055;HRun=2;HaplotypeScore=69.4151;InbreedingCoeff=0.2959;MQ=64.12;MQ0=21;MQRankSum=-0.371;QD=4.52;ReadPosRankSum=2.377;VQSLOD=0.7914;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:3,0:2:6.02:0,6,85	1/1:2,0:2:5.99:49,6,0	0/1:83,1:21:49.28:49,0,81	0/0:93,2:17:17.41:0,17,111	0/0:4,0:4:4.87:0,5,70	1/1:6,0:5:8.27:48,8,0	./.	0/0:11,0:11:26.37:0,26,141	./.	0/1:5,0:5:4.14:55,0,4	1/1:2,0:2:5.93:40,6,0	1/1:3,0:3:8.50:65,9,0	0/0:2,0:2:3.01:0,3,43	./.	1/1:1,0:1:3:27,3,0	1/1:1,0:1:3:27,3,0	0/1:8,0:8:23.41:81,0,23	1/1:0,4:4:6:55,6,0	1/1:5,0:5:2.24:68,2,0	1/1:1,0:1:2.88:15,3,0	./.	./.	0/0:1,0:1:3:0,3,25	./.	0/1:3,0:3:2.15:21,0,2	1/1:2,0:2:2.97:20,3,0	1/1:2,0:2:3:27,3,0	1/1:11,0:11:24.40:149,24,0
chr10	68384682	.	TA	T	1215.57	PASS	AB=0.933;AC=30;AF=0.577;AN=52;BaseQRankSum=1.194;DP=327;FS=14.474;HRun=5;HaplotypeScore=66.1166;InbreedingCoeff=0.3742;MQ=56.42;MQ0=19;MQRankSum=-1.678;QD=12.28;ReadPosRankSum=0.079;VQSLOD=1.0866;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:3,0:3:6.02:0,6,80	1/1:3,0:3:8.71:54,9,0	0/0:98,1:23:17.01:0,17,184	0/0:113,1:27:35.12:0,35,246	0/0:3,0:3:9.03:0,9,119	0/1:6,0:6:6.70:49,0,7	./.	1/1:6,14:20:47.75:414,48,0	0/0:1,0:1:3.01:0,3,40	0/1:6,0:6:11.11:11,0,19	0/1:5,0:5:6.84:7,0,14	1/1:2,0:2:6.01:63,6,0	0/0:4,0:4:9.02:0,9,104	./.	1/1:3,0:3:8.85:72,9,0	1/1:3,0:3:8.82:66,9,0	1/1:8,0:8:9.40:132,9,0	0/1:6,0:6:7.05:7,0,14	0/1:7,0:7:3.45:77,0,3	1/1:3,0:3:8.85:60,9,0	1/1:1,0:1:2.88:15,3,0	0/1:1,0:3:11.69:12,0,15	0/0:1,0:1:3.01:0,3,39	0/0:1,0:1:3:0,3,25	1/1:8,0:8:16.01:111,16,0	1/1:4,0:4:11.66:76,12,0	1/1:2,0:2:3.01:32,3,0	1/1:9,0:9:14.98:130,15,0
chr10	68385158	.	CT	C	1540.43	PASS	AB=0.799;AC=34;AF=0.607;AN=56;BaseQRankSum=3.061;DP=671;FS=5.806;HRun=16;HaplotypeScore=81.7544;InbreedingCoeff=0.2967;MQ=59.12;MQ0=19;MQRankSum=0.931;QD=3.86;ReadPosRankSum=2.417;VQSLOD=1.0211;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,1:32:18.99:0,19,322	1/1:8,1:9:6.23:35,6,0	0/0:68,2:13:1.84:0,2,36	0/0:71,0:18:14.68:0,15,100	0/0:29,2:31:25.20:0,25,281	0/1:14,2:17:7.01:51,0,7	1/1:20,2:24:18.51:96,19,0	1/1:14,0:20:10.16:28,10,0	0/1:22,5:28:34.62:123,0,35	0/1:3,0:12:0.63:20,0,1	1/1:6,0:29:2.53:57,3,0	1/1:7,7:15:13.58:77,14,0	0/0:16,1:17:1.80:0,2,99	0/1:17,0:17:28.80:66,0,29	0/1:20,3:24:11.12:134,0,11	0/1:7,10:17:12.26:44,0,12	1/1:21,4:25:21.08:119,21,0	1/1:11,0:24:12.45:58,12,0	1/1:16,3:19:15.91:149,16,0	1/1:10,7:17:10.50:70,10,0	1/1:11,6:17:24.10:147,24,0	0/1:12,4:15:23.44:88,0,23	0/0:13,1:14:14.70:0,15,208	0/0:31,0:30:34.51:0,35,396	1/1:2,6:9:7.90:42,8,0	1/1:22,5:27:28.25:164,28,0	0/1:19,2:22:24.05:119,0,24	1/1:2,5:7:5.51:36,6,0
chr10	68386081	.	AAAAAC	A	1907.08	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.011;DP=746;FS=0.622;HRun=0;HaplotypeScore=143.4961;InbreedingCoeff=0.9971;MQ=77.21;MQ0=0;MQRankSum=-4.931;QD=34.67;ReadPosRankSum=-0.990;VQSLOD=3.5307;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:63,0:63:99:0,172,5014	0/0:8,0:8:21.07:0,21,618	0/0:17,0:17:36.12:0,36,990	0/0:17,0:17:33.54:0,34,772	0/0:22,0:22:63.22:0,63,1706	0/0:27,0:27:66.23:0,66,1942	0/0:29,0:29:84.29:0,84,2443	1/1:9,25:34:72.14:1265,72,0	0/0:31,0:31:90.30:0,90,2463	0/0:9,0:9:27.09:0,27,743	0/0:21,0:21:51.13:0,51,1246	0/0:29,0:29:81.28:0,81,2199	0/0:27,0:27:72.21:0,72,2013	0/0:25,0:25:66.23:0,66,1801	0/0:33,0:33:96.33:0,96,2722	0/0:32,0:32:90.31:0,90,2594	0/0:35,0:35:93.32:0,93,2564	1/1:4,17:21:39.13:764,39,0	0/0:34,0:34:99:0,102,2832	0/0:19,0:19:54.19:0,54,1514	0/0:49,0:49:99:0,138,4002	0/0:22,0:22:66.13:0,66,1804	0/0:22,0:22:60.21:0,60,1689	0/0:34,0:34:93.30:0,93,2612	0/0:16,0:16:48.16:0,48,1353	0/0:19,0:19:57.20:0,57,1676	0/0:39,0:39:99:0,117,3290	0/0:12,0:12:36.12:0,36,1058
chr10	68386900	.	C	CAGGGAGGG	389.72	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=-0.062;DP=510;FS=0.000;HRun=0;HaplotypeScore=134.9178;InbreedingCoeff=0.6145;MQ=78.50;MQ0=1;MQRankSum=-2.478;QD=12.18;ReadPosRankSum=-0.983;VQSLOD=2.5416;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:63.15:0,63,1630	0/0:10,0:10:27.08:0,27,639	0/1:19,0:18:4.55:5,0,347	0/0:24,0:23:11.17:0,11,105	0/0:14,0:14:24.06:0,24,539	0/0:11,0:11:14.85:0,15,551	0/0:17,0:17:42.13:0,42,992	0/0:16,0:16:12.03:0,12,247	0/0:25,0:25:60.20:0,60,1517	0/0:28,0:28:49.89:0,50,1240	0/0:11,0:11:18.06:0,18,467	0/0:16,0:16:36.12:0,36,935	0/0:13,0:13:27.09:0,27,701	0/0:17,0:17:42.14:0,42,1075	0/0:18,0:18:39.13:0,39,1011	0/0:26,0:26:57.18:0,57,1328	0/0:32,0:32:66.23:0,66,1714	1/1:9,4:13:12.04:475,12,0	0/0:13,0:13:18.06:0,18,468	0/0:13,0:13:18.02:0,18,410	0/0:40,0:39:93.32:0,93,2342	0/0:11,0:11:30.10:0,30,776	0/0:11,0:11:24.08:0,24,531	0/0:15,0:15:30.10:0,30,779	0/0:14,0:14:27.09:0,27,701	0/0:27,0:27:48.16:0,48,1118	0/0:16,0:16:36.12:0,36,926	0/0:7,0:7:12.04:0,12,312
chr10	68387885	.	CA	C	15561.56	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=13.480;DP=630;FS=10.292;HRun=1;HaplotypeScore=83.4106;InbreedingCoeff=0.9863;MQ=76.97;MQ0=0;MQRankSum=-4.252;QD=39.00;ReadPosRankSum=0.173;VQSLOD=4.6430;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:59,0:59:99:0,175,2682	1/1:2,4:6:18.01:214,18,0	0/0:22,0:22:65.70:0,66,975	0/0:19,0:20:48.90:0,49,756	0/0:22,0:22:66.21:0,66,1032	1/1:2,13:15:45.11:601,45,0	1/1:0,23:23:63.21:880,63,0	1/1:0,23:23:66.21:902,66,0	0/0:28,0:28:84.27:0,84,1315	1/1:0,25:25:72.12:937,72,0	1/1:0,5:5:15.05:210,15,0	1/1:2,19:21:63.12:834,63,0	0/0:30,0:30:90.29:0,90,1410	1/1:0,19:19:57.19:795,57,0	1/1:0,17:17:48.16:667,48,0	1/1:0,25:25:69.23:962,69,0	1/1:2,32:34:99:1423,102,0	1/1:0,17:17:48.16:670,48,0	1/1:0,17:17:48.14:650,48,0	1/1:0,21:21:60.20:838,60,0	1/1:1,27:28:81.27:1130,81,0	1/1:1,25:26:60.19:818,60,0	0/0:23,0:23:66.18:0,66,983	0/0:27,0:27:81.28:0,81,1282	1/1:0,20:20:60.20:838,60,0	1/1:0,31:31:93.22:1239,93,0	1/1:3,20:23:60.20:828,60,0	1/1:0,3:3:9.03:126,9,0
chr10	68387974	.	A	ATG	1590.84	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-0.251;DP=602;FS=8.870;HRun=0;HaplotypeScore=177.9941;InbreedingCoeff=0.9878;MQ=87.50;MQ0=0;MQRankSum=-5.474;QD=27.91;ReadPosRankSum=-3.767;VQSLOD=3.0180;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,108,1685	0/0:11,0:11:18.25:0,18,200	0/0:22,0:22:60.11:0,60,870	0/0:24,0:23:35.02:0,35,727	0/0:33,0:33:96.33:0,96,1563	0/0:23,0:23:47.59:0,48,517	0/0:17,0:17:42.10:0,42,464	1/1:2,9:14:29.95:341,30,0	0/0:22,0:22:63.18:0,63,973	1/1:5,0:17:50.93:496,51,0	1/1:0,0:10:11.94:99,12,0	0/0:20,0:20:56.92:0,57,562	0/0:26,0:26:72.23:0,72,1148	0/0:17,0:17:43.95:0,44,446	0/0:26,0:26:69.15:0,69,753	0/0:33,0:33:93.12:0,93,986	0/0:32,0:32:81.65:0,82,873	1/1:3,12:16:45.93:813,46,0	0/0:11,0:11:27.49:0,27,280	0/0:19,0:19:57:0,57,534	0/0:42,0:42:98.20:0,98,1061	0/0:12,0:12:29.97:0,30,309	0/0:19,0:19:57.19:0,57,924	0/0:19,0:19:51.17:0,51,829	0/0:23,0:22:60.04:0,60,646	0/0:28,0:28:80.92:0,81,813	0/0:22,0:22:60.06:0,60,616	0/0:8,0:8:24.06:0,24,261
chr10	68387975	.	GA	G	12339.09	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=15.953;DP=584;FS=29.843;HRun=1;HaplotypeScore=119.8400;InbreedingCoeff=0.9895;MQ=89.57;MQ0=0;MQRankSum=-6.797;QD=32.13;ReadPosRankSum=1.006;VQSLOD=2.7714;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,99,1356	1/1:1,10:11:18.06:252,18,0	0/0:23,0:23:56.67:0,57,733	0/0:25,0:24:54.09:0,54,699	0/0:33,0:33:96.27:0,96,1311	1/1:1,22:23:51.12:669,51,0	1/1:0,15:15:39.13:543,39,0	1/1:14,0:14:23.08:130,23,0	0/0:21,0:21:63.17:0,63,845	1/1:16,0:16:41.14:216,41,0	1/1:7,0:7:9.87:45,10,0	1/1:1,17:18:54.17:735,54,0	0/0:24,0:24:72.19:0,72,951	1/1:6,11:17:51.07:608,51,0	1/1:0,23:23:66.22:915,66,0	1/1:0,31:31:90.30:1252,90,0	1/1:1,29:30:81.25:1099,81,0	1/1:16,0:16:41.95:188,42,0	1/1:2,9:11:27.09:367,27,0	1/1:5,14:19:55.39:702,55,0	1/1:3,39:42:99:1378,102,0	1/1:3,9:12:30.05:395,30,0	0/0:21,0:21:60.16:0,60,817	0/0:19,0:19:57.19:0,57,811	1/1:0,21:21:57.12:768,57,0	1/1:12,16:28:80.70:952,81,0	1/1:2,20:22:60.13:792,60,0	1/1:0,8:8:24.08:334,24,0
chr10	68388105	.	TG	T	17766.13	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=17.983;DP=650;FS=4.564;HRun=1;HaplotypeScore=97.9903;InbreedingCoeff=0.9998;MQ=88.17;MQ0=0;MQRankSum=-5.791;QD=40.10;ReadPosRankSum=2.472;VQSLOD=5.1840;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,99,1549	1/1:0,10:10:30.10:420,30,0	0/0:23,0:23:69.23:0,69,1085	0/0:24,0:24:72.22:0,72,1114	0/0:22,0:22:66.22:0,66,1042	1/1:0,13:13:36.12:504,36,0	1/1:0,22:22:63.21:881,63,0	1/1:0,16:16:48.13:651,48,0	0/0:20,0:20:60.19:0,60,926	1/1:1,34:35:99:1405,102,0	1/1:0,12:12:33.07:440,33,0	1/1:0,18:18:48.16:671,48,0	0/0:19,0:19:57.19:0,57,909	1/1:0,19:19:57.19:797,57,0	1/1:0,28:28:84.28:1175,84,0	1/1:0,32:32:90.27:1238,90,0	1/1:0,31:31:87.29:1217,87,0	1/1:0,16:16:45.15:630,45,0	1/1:0,15:15:42.14:587,42,0	1/1:0,28:28:84.15:1108,84,0	1/1:0,44:44:99:1720,123,0	1/1:0,19:19:57.19:797,57,0	0/0:31,0:31:90.31:0,90,1434	0/0:34,0:34:99:0,102,1607	1/1:0,21:21:60.20:839,60,0	1/1:0,26:26:78.26:1091,78,0	1/1:0,28:28:84.28:1175,84,0	1/1:0,10:10:30.10:420,30,0
chr10	68389232	.	C	CTG	20450.27	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-0.599;DP=640;FS=5.311;HRun=0;HaplotypeScore=90.0807;InbreedingCoeff=0.9993;MQ=64.51;MQ0=2;MQRankSum=0.353;QD=44.75;ReadPosRankSum=2.655;VQSLOD=6.4020;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:81.16:0,81,1106	1/1:1,10:11:30.10:545,30,0	0/0:23,0:16:36.05:0,36,502	0/0:20,0:17:48:0,48,618	0/0:13,0:13:36.12:0,36,530	1/1:0,14:14:36.12:673,36,0	1/1:5,22:27:60.21:1123,60,0	1/1:5,27:32:63.16:1048,63,0	0/0:31,0:31:93.26:0,93,1291	1/1:1,19:20:57.20:1047,57,0	1/1:0,13:13:30.10:560,30,0	1/1:0,29:29:69.24:1289,69,0	0/0:31,0:31:93.29:0,93,1328	1/1:3,20:23:60.20:1097,60,0	1/1:3,19:22:51.17:955,51,0	1/1:4,26:30:63.22:1179,63,0	1/1:1,33:34:90.31:1684,90,0	1/1:0,19:18:51.17:955,51,0	1/1:2,22:24:63.21:1132,63,0	1/1:1,13:15:33.11:617,33,0	1/1:2,39:42:99:2077,111,0	1/1:4,15:18:39.60:725,40,0	0/0:10,0:10:24.08:0,24,353	0/0:24,0:24:69.23:0,69,1015	1/1:0,13:14:36.12:674,36,0	1/1:3,17:19:48.12:827,48,0	1/1:2,31:34:77.44:1458,77,0	1/1:1,14:15:42.14:786,42,0
chr10	68389490	.	T	TG	14342.32	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-12.818;DP=603;FS=6.647;HRun=1;HaplotypeScore=57.5455;InbreedingCoeff=0.9987;MQ=65.71;MQ0=0;MQRankSum=1.759;QD=34.56;ReadPosRankSum=1.553;VQSLOD=4.4229;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:91.54:0,92,1343	1/1:2,15:17:39.13:581,39,0	0/0:11,0:9:27.06:0,27,315	0/0:12,0:12:20.75:0,21,206	0/0:20,0:20:54.10:0,54,643	1/1:0,14:14:36.12:535,36,0	1/1:0,16:16:27.09:391,27,0	1/1:5,25:31:66.26:1005,66,0	0/0:17,0:17:51.11:0,51,613	1/1:2,35:37:99:1524,111,0	1/1:1,19:20:57.11:814,57,0	1/1:1,12:13:36.12:516,36,0	0/0:18,0:18:48.12:0,48,578	1/1:1,16:17:36.12:519,36,0	1/1:1,25:26:66.13:974,66,0	1/1:2,17:19:39.13:566,39,0	1/1:2,22:24:54.18:804,54,0	0/0:28,0:28:50.96:0,51,288	1/1:1,15:16:45.05:608,45,0	1/1:0,23:23:69.14:967,69,0	1/1:1,13:14:27.09:402,27,0	1/1:1,25:26:72.38:957,72,0	0/0:14,0:14:42.08:0,42,486	0/0:28,0:28:81.24:0,81,1013	1/1:2,24:26:39.13:575,39,0	1/1:2,28:30:87.14:1102,87,0	1/1:4,23:28:50.96:730,51,0	1/1:1,17:18:54.01:772,54,0
chr10	68389491	.	G	GTTT	552.37	PASS	AB=0.968;AC=3;AF=0.054;AN=56;BaseQRankSum=-2.766;DP=596;FS=1.635;HRun=10;HaplotypeScore=129.4420;InbreedingCoeff=0.6014;MQ=65.75;MQ0=0;MQRankSum=-0.338;QD=9.52;ReadPosRankSum=-2.308;VQSLOD=0.2284;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:40:99:0,114,1284	0/0:14,0:14:32.40:0,32,122	0/0:10,0:9:17.99:0,18,201	0/0:13,0:12:17.76:0,18,188	0/0:18,0:20:50.92:0,51,581	0/0:14,0:14:28.40:0,28,107	0/0:16,0:16:21.90:0,22,92	0/1:28,0:30:20.59:21,0,152	0/0:17,0:18:48.03:0,48,553	0/0:37,0:37:83.45:0,83,370	0/0:20,0:20:44.81:0,45,169	0/0:13,0:14:13.45:0,13,76	0/0:16,0:16:42.04:0,42,458	0/0:16,0:17:14.24:0,14,94	0/0:26,0:26:28.40:0,28,160	0/0:18,0:19:28.29:0,28,125	0/0:23,0:23:47.80:0,48,191	1/1:8,18:28:40.31:637,40,0	0/0:16,0:16:14.17:0,14,143	0/0:23,0:23:29.28:0,29,146	0/0:13,0:13:22.41:0,22,86	0/0:27,0:27:48.26:0,48,189	0/0:14,0:14:30.04:0,30,365	0/0:28,0:28:78.15:0,78,919	0/0:25,0:25:15.37:0,15,105	0/0:29,0:31:17.78:0,18,152	0/0:24,0:25:38.30:0,38,165	0/0:17,0:18:43.29:0,43,152
chr10	68390038	.	C	CAACAAACA	907.70	PASS	AB=0.600;AC=3;AF=0.054;AN=56;BaseQRankSum=0.578;DP=713;FS=10.483;HRun=0;HaplotypeScore=171.1756;InbreedingCoeff=0.6087;MQ=58.07;MQ0=6;MQRankSum=-3.290;QD=19.31;ReadPosRankSum=-3.001;VQSLOD=1.9735;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:66.17:0,66,1564	0/0:7,0:7:15.05:0,15,373	0/0:37,0:23:17.55:0,18,381	0/0:22,0:15:21.06:0,21,406	0/0:29,0:29:54.14:0,54,1282	0/0:19,0:19:42.14:0,42,1031	0/0:30,0:30:12.23:0,12,1301	1/1:16,0:26:30.78:289,31,0	0/0:24,0:25:51.17:0,51,1111	0/0:25,0:25:51.17:0,51,1200	0/0:15,0:15:27.09:0,27,675	0/0:27,0:27:60.19:0,60,1356	0/0:18,0:18:39.13:0,39,963	0/0:19,0:19:33.11:0,33,756	0/0:50,0:49:99:0,105,2483	0/0:36,0:36:78.27:0,78,1860	0/0:33,0:33:66.20:0,66,1507	0/1:7,10:21:14.84:725,0,15	0/0:9,0:9:9.03:0,9,230	0/0:30,0:30:51.16:0,51,1076	0/0:21,0:21:39.10:0,39,738	0/0:24,0:24:51.13:0,51,1245	0/0:22,0:22:36.11:0,36,836	0/0:46,0:46:92.81:0,93,2271	0/0:20,0:20:34.40:0,34,842	0/0:27,0:28:60.18:0,60,1305	0/0:30,0:30:62.80:0,63,1456	0/0:11,0:11:21.07:0,21,536
chr10	68390285	.	G	GAA	2492.53	PASS	AB=0.904;AC=35;AF=0.625;AN=56;BaseQRankSum=1.404;DP=561;FS=7.718;HRun=16;HaplotypeScore=90.8317;InbreedingCoeff=0.4107;MQ=49.38;MQ0=13;MQRankSum=-3.142;QD=6.44;ReadPosRankSum=-1.710;VQSLOD=-0.0429;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:5.05:0,5,289	1/1:11,1:13:0.23:149,0,0	0/0:12,0:3:2.62:0,3,22	0/0:10,0:5:3.18:0,3,13	0/0:26,0:29:21.36:0,21,183	0/1:18,2:22:18.09:185,0,18	1/1:14,3:17:22.98:203,23,0	0/0:13,0:30:0.03:0,0,116	0/0:17,0:18:2.65:0,3,77	1/1:7,1:18:6.91:95,7,0	0/1:14,0:19:8.56:50,0,9	1/1:9,5:14:3.01:37,3,0	0/1:10,0:10:11.15:11,0,63	1/1:7,12:20:8.39:82,8,0	1/1:9,18:27:12.76:123,13,0	1/1:7,13:21:11.29:99,11,0	1/1:31,1:31:22.86:306,23,0	0/1:26,0:24:0.42:0,0,159	1/1:22,2:23:10.05:70,10,0	1/1:24,3:28:44.30:380,44,0	1/1:7,3:10:5.61:47,6,0	1/1:12,0:12:17.06:100,17,0	0/0:12,0:15:9.81:0,10,74	0/0:20,0:21:39.11:0,39,236	1/1:10,0:10:8.97:83,9,0	1/1:20,0:22:13.94:211,14,0	1/1:18,2:22:41.84:345,42,0	0/1:12,2:13:7.48:91,0,7
chr10	68391048	.	C	CA	2488	PASS	AB=0.776;AC=32;AF=0.571;AN=56;BaseQRankSum=7.049;DP=533;FS=5.735;HRun=15;HaplotypeScore=104.5195;InbreedingCoeff=0.4291;MQ=64.96;MQ0=2;MQRankSum=-5.060;QD=7.03;ReadPosRankSum=-3.840;VQSLOD=1.7324;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,5:42:50.89:0,51,421	1/1:4,4:8:2.90:122,3,0	0/1:23,0:16:4.67:5,0,35	0/0:15,0:10:2.21:0,2,30	0/0:23,1:25:9.23:0,9,202	1/1:9,9:18:2.97:113,3,0	0/1:11,5:17:12.37:106,0,12	0/1:24,3:27:15.69:16,0,110	0/0:20,0:20:26.80:0,27,153	0/0:7,0:13:15.94:0,16,64	0/0:5,0:14:12.52:0,13,46	1/1:8,6:14:17.74:117,18,0	0/0:9,0:11:12.68:0,13,65	1/1:8,1:9:14.85:105,15,0	1/1:10,11:22:32.59:242,33,0	1/1:9,14:23:17.88:241,18,0	0/1:7,11:22:14.60:176,0,15	1/1:9,2:22:31.78:190,32,0	1/1:14,2:19:17.85:155,18,0	1/1:9,8:21:8.22:160,8,0	0/1:8,10:18:30.06:102,0,30	0/1:9,3:13:2:66,0,2	0/0:17,1:19:0.18:0,0,105	0/0:15,0:19:37.17:0,37,194	1/1:2,8:11:5.80:147,6,0	1/1:9,9:20:14.62:208,15,0	1/1:20,15:36:3.46:307,3,0	1/1:5,5:10:11.97:98,12,0
chr10	68391196	.	A	AT	602.07	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=-2.119;DP=507;FS=4.768;HRun=3;HaplotypeScore=99.2056;InbreedingCoeff=0.3346;MQ=71.12;MQ0=0;MQRankSum=-1.145;QD=8.25;ReadPosRankSum=-0.883;VQSLOD=0.5609;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:80.88:0,81,929	0/0:5,0:5:12.92:0,13,65	0/0:16,0:12:32.71:0,33,334	0/0:18,0:18:29.92:0,30,300	0/0:25,0:25:75.13:0,75,843	0/0:17,0:17:29.93:0,30,141	0/0:16,0:16:32.42:0,32,188	0/1:24,0:24:48.68:79,0,49	0/0:16,0:16:48.14:0,48,564	0/1:18,0:18:51.94:64,0,52	0/1:14,0:14:37.44:42,0,37	0/0:15,0:15:33.40:0,33,160	0/0:18,0:18:54.16:0,54,636	0/0:18,0:18:35.49:0,35,165	0/0:17,0:17:42.56:0,43,231	0/0:15,0:15:33.79:0,34,176	0/0:22,0:22:39.05:0,39,201	1/1:0,17:17:39.13:541,39,0	0/0:24,0:24:56.89:0,57,288	0/0:25,0:25:46.88:0,47,244	0/0:18,0:18:36.48:0,36,198	0/0:13,0:13:24.20:0,24,127	0/0:14,0:14:42.10:0,42,473	0/0:19,0:19:51.10:0,51,563	0/0:15,0:15:21.58:0,22,90	0/0:18,0:18:36.06:0,36,252	0/0:26,0:26:50.03:0,50,219	0/0:15,0:15:26.64:0,27,152
chr10	68391199	.	T	TAA	9402.35	PASS	AB=0.771;AC=38;AF=0.679;AN=56;BaseQRankSum=1.327;DP=522;FS=1.230;HRun=9;HaplotypeScore=81.0842;InbreedingCoeff=0.8430;MQ=69.48;MQ0=0;MQRankSum=-1.550;QD=25.83;ReadPosRankSum=-1.430;VQSLOD=4.5162;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:29:80.88:0,81,832	1/1:2,2:5:9.03:122,9,0	0/0:17,0:13:32.98:0,33,331	0/1:15,0:16:6.79:7,0,122	0/0:25,0:25:63.11:0,63,670	1/1:1,17:18:36.11:534,36,0	1/1:4,12:16:27.05:389,27,0	1/1:4,1:27:25.35:196,25,0	0/0:16,0:16:45.11:0,45,478	0/1:3,0:19:17.43:104,0,17	1/1:3,0:14:24.95:86,25,0	1/1:1,12:13:33.11:508,33,0	0/0:20,0:20:54.07:0,54,555	1/1:2,16:18:36.12:554,36,0	1/1:3,13:17:36.12:554,36,0	1/1:2,15:17:33.11:508,33,0	1/1:2,20:23:44.64:655,45,0	0/0:18,0:18:32.59:0,33,132	1/1:6,19:25:54.17:808,54,0	1/1:4,20:25:57.11:817,57,0	1/1:2,15:18:44.59:629,45,0	1/1:1,15:16:35.95:449,36,0	0/0:14,0:14:39.10:0,39,415	0/0:19,0:19:48.06:0,48,498	1/1:1,13:15:29.96:414,30,0	1/1:6,15:21:45.15:687,45,0	1/1:2,23:25:57.19:866,57,0	1/1:2,13:16:35.61:517,36,0
chr10	68391408	.	CCACTG	C	4137.70	PASS	AB=0.897;AC=9;AF=0.161;AN=56;BaseQRankSum=9.697;DP=613;FS=4.345;HRun=0;HaplotypeScore=119.6549;InbreedingCoeff=0.8535;MQ=78.32;MQ0=0;MQRankSum=-9.085;QD=36.30;ReadPosRankSum=0.424;VQSLOD=3.1551;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,99,3043	0/0:3,0:3:9.03:0,9,277	0/0:17,0:17:40.01:0,40,1018	0/0:16,0:16:39.11:0,39,1114	0/0:38,0:38:99:0,108,3292	0/0:23,0:23:60.21:0,60,1842	0/0:17,0:17:48.15:0,48,1387	1/1:7,29:33:75.24:1495,75,0	0/0:16,0:16:45.15:0,45,1383	1/1:2,18:20:45.15:913,45,0	1/1:0,12:11:27.09:559,27,0	0/0:23,0:23:63.22:0,63,1934	0/0:20,0:20:60.21:0,60,1810	0/0:16,0:16:45.15:0,45,1315	0/0:28,0:28:81.28:0,81,2489	0/0:29,0:29:75.26:0,75,2248	0/0:34,0:34:96.27:0,96,2804	1/1:0,20:20:54.19:1119,54,0	0/0:27,0:27:63.22:0,63,1897	0/0:10,0:10:24.08:0,24,730	0/0:36,0:36:99:0,108,3209	0/0:17,0:17:48.15:0,48,1468	0/0:20,0:20:60.21:0,60,1840	0/0:11,0:11:33.11:0,33,997	0/0:12,0:12:33.11:0,33,1013	0/1:23,3:26:52.06:52,0,1814	0/0:31,0:31:81.28:0,81,2487	0/0:21,0:21:63.22:0,63,1934
chr10	68391628	.	T	TGCGCGCGCGCGC	14596.69	PASS	AC=36;AF=0.692;AN=52;BaseQRankSum=11.582;DP=462;FS=0.000;HRun=0;HaplotypeScore=193.9304;InbreedingCoeff=0.8340;MQ=64.05;MQ0=9;MQRankSum=-12.853;QD=62.11;ReadPosRankSum=-3.390;VQSLOD=3.6515;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:32:81.28:0,81,2950	1/1:3,0:6:6.02:218,6,0	0/0:36,0:19:57.16:0,57,1771	0/0:29,0:18:45.08:0,45,1212	0/0:21,0:21:57.20:0,57,2010	1/1:4,5:11:9.02:539,9,0	1/1:3,8:15:21.03:1075,21,0	1/1:33,0:32:82.49:1725,82,0	0/0:20,0:20:57.16:0,57,1802	1/1:18,0:18:51.13:1490,51,0	1/1:8,0:8:2:126,2,0	1/1:6,5:12:12.04:649,12,0	0/0:13,0:13:36.12:0,36,1276	./.	1/1:7,2:9:6.02:357,6,0	1/1:8,5:15:15.05:696,15,0	1/1:9,7:17:24.08:1276,24,0	1/1:14,0:16:42.11:1752,42,0	1/1:8,3:10:23.91:778,24,0	./.	1/1:4,0:6:3.01:170,3,0	1/1:2,4:6:3.01:179,3,0	0/0:20,0:20:51.16:0,51,1811	0/0:38,0:38:97.58:0,98,3510	1/1:7,9:16:12.04:717,12,0	1/1:7,13:22:42.59:1886,43,0	1/1:2,3:6:9.03:527,9,0	1/1:1,2:7:9.03:435,9,0
chr10	68391636	.	T	TGCACGCGCGCGCGC	12008.26	PASS	AB=1.000;AC=37;AF=0.661;AN=56;BaseQRankSum=12.310;DP=439;FS=0.000;HRun=0;HaplotypeScore=197.3712;InbreedingCoeff=0.5901;MQ=58.31;MQ0=9;MQRankSum=-10.939;QD=52.90;ReadPosRankSum=1.083;VQSLOD=4.2543;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:39:99:0,114,3994	1/1:2,0:2:2.96:19,3,0	0/0:34,0:17:48.16:0,48,1557	0/0:23,0:12:32.64:0,33,885	0/0:25,0:25:72.25:0,72,2585	1/1:13,0:13:11.31:552,11,0	1/1:22,0:22:21.09:840,21,0	0/1:19,0:18:99:223,0,331	0/0:21,0:21:60.21:0,60,2267	1/1:7,11:19:48.07:2375,48,0	1/1:6,5:15:1.28:208,1,0	1/1:8,0:8:12.03:425,12,0	0/0:11,0:11:33.11:0,33,1344	1/1:5,0:5:3:25,3,0	1/1:3,0:3:6.02:289,6,0	0/1:8,0:8:10.35:545,0,10	1/1:17,0:17:21.07:802,21,0	0/1:13,0:12:16.13:1162,0,16	1/1:8,0:7:18.05:612,18,0	1/1:7,0:7:3:25,3,0	1/1:7,0:7:2.90:16,3,0	1/1:8,0:8:3.01:144,3,0	0/0:20,0:20:50.69:0,51,2127	0/0:38,0:38:99:0,107,4044	1/1:18,0:18:21.06:874,21,0	1/1:21,0:21:48.06:1768,48,0	1/1:9,0:9:18.05:672,18,0	1/1:5,0:5:12.04:433,12,0
chr10	68391826	.	GT	G	8530.81	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=8.983;DP=555;FS=7.871;HRun=7;HaplotypeScore=57.8287;InbreedingCoeff=0.9809;MQ=79.10;MQ0=0;MQRankSum=-2.973;QD=27.17;ReadPosRankSum=0.889;VQSLOD=5.4726;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:84.26:0,84,1044	1/1:0,4:4:6.01:61,6,0	0/0:21,0:21:49.83:0,50,558	0/0:19,0:18:33.62:0,34,364	0/0:35,0:35:99:0,102,1270	1/1:0,18:18:51.12:520,51,0	1/1:1,14:15:42.10:428,42,0	1/1:5,22:26:66.15:673,66,0	0/0:30,0:30:81.26:0,81,1019	0/0:29,0:29:81.26:0,81,1018	0/0:18,0:18:45.10:0,45,548	1/1:0,18:18:51.12:520,51,0	0/0:17,0:17:45.14:0,45,566	1/1:0,17:17:51.12:520,51,0	1/1:0,13:13:36.08:367,36,0	1/1:1,18:19:13.37:452,13,0	1/1:2,14:16:42.10:429,42,0	1/1:1,28:29:78.18:796,78,0	1/1:1,16:17:48.11:490,48,0	1/1:3,10:13:30.07:306,30,0	1/1:1,16:17:42.09:429,42,0	1/1:0,11:11:33.07:336,33,0	0/0:25,0:25:75.24:0,75,943	0/0:18,0:18:54.17:0,54,679	1/1:1,15:14:36.08:367,36,0	1/1:1,24:25:72.16:735,72,0	1/1:0,18:18:51.12:520,51,0	1/1:0,21:21:57.13:581,57,0
chr10	68392174	.	CA	C	4182.48	PASS	AB=0.692;AC=39;AF=0.696;AN=56;BaseQRankSum=8.841;DP=421;FS=10.338;HRun=9;HaplotypeScore=80.5887;InbreedingCoeff=0.7896;MQ=46.55;MQ0=11;MQRankSum=-7.645;QD=14.37;ReadPosRankSum=1.216;VQSLOD=2.8799;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:69.19:0,69,786	1/1:4,5:9:23.08:189,23,0	0/0:9,0:5:9.23:0,9,75	0/0:8,0:3:2.88:0,3,15	0/0:18,0:18:48.14:0,48,554	1/1:2,10:12:6.25:222,6,0	1/1:3,8:12:21.01:192,21,0	1/1:11,13:24:27.91:342,28,0	0/0:15,0:15:30.09:0,30,346	1/1:6,9:15:29.99:266,30,0	1/1:4,12:16:26.96:236,27,0	1/1:7,9:15:26.68:244,27,0	0/0:7,0:7:15.03:0,15,163	0/1:5,4:8:4.07:85,0,4	1/1:4,11:16:28.91:303,29,0	1/1:4,12:13:20.69:191,21,0	1/1:11,9:23:14.08:230,14,0	1/1:7,7:15:0.20:167,0,0	1/1:6,3:9:4.09:99,4,0	1/1:7,5:11:23.99:213,24,0	1/1:6,3:9:4.78:76,5,0	1/1:6,5:10:14.97:130,15,0	0/0:18,0:18:42.09:0,42,461	0/0:20,0:20:36.09:0,36,405	1/1:4,6:7:18.01:164,18,0	1/1:5,14:18:26.49:355,26,0	1/1:11,7:18:19.10:252,19,0	1/1:7,7:14:26.38:227,26,0
chr10	68392186	.	AAAG	A	378.60	PASS	AB=0.923;AC=14;AF=0.250;AN=56;BaseQRankSum=-1.222;DP=454;FS=0.563;HRun=0;HaplotypeScore=109.6973;InbreedingCoeff=-0.3366;MQ=51.26;MQ0=6;MQRankSum=0.856;QD=1.79;ReadPosRankSum=-6.620;VQSLOD=0.2201;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:95.45:0,95,1606	0/1:5,2:7:24.78:25,0,135	0/0:16,0:11:29.26:0,29,337	0/1:14,0:7:3.81:4,0,141	0/0:18,0:18:54.10:0,54,817	0/0:10,0:10:18.11:0,18,96	0/0:15,0:15:23.39:0,23,114	0/0:25,0:24:4.62:0,5,277	0/0:12,0:12:36.10:0,36,629	0/0:13,0:13:28.25:0,28,356	0/0:19,0:19:35.18:0,35,362	0/0:18,0:18:1.42:0,1,150	0/0:7,0:7:18.91:0,19,272	0/1:7,0:7:9.91:10,0,44	0/1:18,0:18:59.04:59,0,220	0/1:15,1:13:8.04:8,0,95	0/1:19,1:20:19.61:20,0,154	0/1:16,0:16:16.37:16,0,147	0/1:26,0:24:99:108,0,140	0/1:12,1:13:99:101,0,180	0/1:8,1:9:45.23:69,0,45	0/1:12,0:11:14.41:14,0,150	0/0:20,0:20:38.63:0,39,799	0/0:17,0:17:23.99:0,24,572	0/1:9,5:12:26.69:27,0,90	0/1:20,4:23:17.29:17,0,221	0/0:16,0:15:26.47:0,26,249	0/1:12,3:14:49.49:49,0,210
chr10	68392189	.	G	GAA	5031.18	PASS	AB=0.690;AC=37;AF=0.661;AN=56;BaseQRankSum=6.680;DP=460;FS=3.548;HRun=12;HaplotypeScore=89.8936;InbreedingCoeff=0.7755;MQ=54.23;MQ0=6;MQRankSum=-6.742;QD=16.18;ReadPosRankSum=-1.776;VQSLOD=3.8059;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:38:65.23:0,65,666	1/1:5,2:8:11.40:134,11,0	0/0:19,0:14:24.62:0,25,178	0/0:18,0:9:10.95:0,11,92	0/0:18,0:18:35.97:0,36,328	1/1:4,5:10:22.55:254,23,0	1/1:6,9:15:24.08:336,24,0	1/1:21,0:21:7.12:115,7,0	0/0:12,0:13:32.68:0,33,284	0/1:6,0:13:6.57:39,0,7	0/1:8,0:18:5.32:44,0,5	1/1:12,7:20:28.56:316,29,0	0/0:7,0:7:8.86:0,9,83	1/1:5,3:7:14.96:173,15,0	1/1:11,6:19:40.94:467,41,0	1/1:10,5:12:17.54:211,18,0	1/1:15,4:20:21.51:284,22,0	1/1:8,3:15:38.31:369,38,0	1/1:6,18:24:63.34:645,63,0	0/1:10,3:14:0.34:246,0,0	1/1:5,4:9:19.18:179,19,0	1/1:5,5:10:19.47:185,19,0	0/0:18,0:19:35.58:0,36,373	0/0:14,0:16:30.33:0,30,242	1/1:9,4:11:8.83:114,9,0	1/1:15,8:22:38.16:510,38,0	1/1:7,10:17:18.66:220,19,0	1/1:11,1:13:17.53:189,18,0
chr10	68392386	.	AC	A	5708.50	PASS	AB=0.955;AC=41;AF=0.732;AN=56;BaseQRankSum=12.074;DP=529;FS=0.000;HRun=1;HaplotypeScore=134.7777;InbreedingCoeff=0.9027;MQ=78.47;MQ0=1;MQRankSum=-3.387;QD=14.83;ReadPosRankSum=-2.208;VQSLOD=3.7929;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,135,2134	1/1:10,0:10:27.75:202,28,0	0/0:17,1:16:23.52:0,24,366	0/1:19,1:16:27.35:27,0,279	0/0:24,0:24:72.24:0,72,1126	1/1:20,0:20:44.89:282,45,0	1/1:20,0:20:49.70:324,50,0	1/1:43,0:42:99:742,111,0	0/0:13,0:13:39.13:0,39,618	1/1:21,0:21:60.57:437,61,0	1/1:12,1:13:30.71:215,31,0	1/1:19,0:19:34.38:182,34,0	0/0:14,0:14:42.14:0,42,668	1/1:13,0:13:33.34:188,33,0	1/1:18,0:18:23.14:237,23,0	1/1:13,1:14:32.41:224,32,0	1/1:15,0:15:35.65:204,36,0	1/1:19,0:19:44.20:266,44,0	1/1:32,0:31:80.62:625,81,0	1/1:21,0:21:48.05:325,48,0	1/1:6,1:7:20.45:159,20,0	1/1:7,0:7:12.86:61,13,0	0/0:11,0:11:33.10:0,33,504	0/0:18,0:18:54.18:0,54,839	1/1:18,0:18:41.29:281,41,0	1/1:23,0:23:58.21:352,58,0	1/1:15,0:14:32.51:156,33,0	1/1:16,0:16:41.37:216,41,0
chr10	68392413	.	CT	C	2374.87	PASS	AB=0.995;AC=30;AF=0.536;AN=56;BaseQRankSum=12.632;DP=587;FS=0.789;HRun=11;HaplotypeScore=167.5062;InbreedingCoeff=0.1254;MQ=71.41;MQ0=11;MQRankSum=-1.401;QD=5.60;ReadPosRankSum=2.828;VQSLOD=0.5744;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,3:43:16.08:0,16,972	1/1:6,0:6:11.27:56,11,0	0/0:35,1:15:11.93:0,12,131	0/1:38,1:19:25.01:25,0,120	0/0:23,1:24:30.19:0,30,493	0/1:14,0:15:26.01:106,0,26	0/1:23,0:23:7.51:171,0,8	0/1:56,0:55:68.39:254,0,68	0/0:7,0:8:20.89:0,21,205	1/1:23,0:23:15.59:122,16,0	0/1:17,0:17:33.89:69,0,34	1/1:16,0:16:27.89:131,28,0	0/0:19,2:21:32.42:0,32,517	0/1:12,0:12:23.03:80,0,23	1/1:17,0:17:3.59:123,4,0	1/1:14,0:14:28.15:148,28,0	1/1:17,0:17:39.42:190,39,0	1/1:21,0:21:25.91:189,26,0	0/1:21,0:21:10.01:80,0,10	0/1:25,1:26:35.63:176,0,36	0/1:8,0:8:6.13:54,0,6	1/1:9,0:9:2.62:72,3,0	0/0:13,0:14:35.95:0,36,358	0/0:16,1:17:17.38:0,17,362	0/1:15,0:15:48.02:53,0,48	0/1:24,0:24:7.16:157,0,7	0/1:28,0:27:10.26:186,0,10	1/1:17,0:17:24.07:121,24,0
chr10	68392423	.	TTC	T	1638.79	PASS	AB=0.977;AC=30;AF=0.536;AN=56;BaseQRankSum=14.251;DP=575;FS=2.526;HRun=0;HaplotypeScore=174.9483;InbreedingCoeff=0.3528;MQ=70.75;MQ0=11;MQRankSum=-4.013;QD=4.48;ReadPosRankSum=4.814;VQSLOD=3.0248;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,126,2018	1/1:5,0:5:8.68:26,9,0	0/0:37,0:17:35.80:0,36,348	0/0:41,0:22:15.76:0,16,316	0/0:23,0:23:69.06:0,69,1018	0/1:17,0:17:28.06:41,0,28	0/1:23,0:23:25:68,0,25	0/1:48,1:49:99:270,0,139	0/0:11,0:11:33.05:0,33,461	1/1:24,0:24:18.16:138,18,0	0/1:12,1:13:36.03:66,0,36	1/1:15,0:15:21.78:67,22,0	0/0:20,0:20:57.08:0,57,924	0/1:11,0:11:20.08:46,0,20	1/1:15,1:16:16.59:134,17,0	1/1:16,0:16:21.26:64,21,0	1/1:20,0:20:30.48:92,30,0	1/1:21,1:22:20.24:130,20,0	0/1:11,0:11:0.28:40,0,0	0/1:27,2:29:56.31:110,0,56	0/1:11,0:11:2.17:62,0,2	0/1:10,0:10:1.75:27,0,2	0/0:17,0:17:50.90:0,51,723	0/0:16,0:16:47.99:0,48,725	0/1:11,1:12:9.14:54,0,9	1/1:24,0:24:13.03:156,13,0	1/1:27,0:26:11.04:153,11,0	1/1:10,1:11:20.22:93,20,0
chr10	68392424	.	TC	T	9708.93	PASS	AB=1.000;AC=41;AF=0.732;AN=56;BaseQRankSum=12.358;DP=562;FS=0.000;HRun=2;HaplotypeScore=135.6072;InbreedingCoeff=0.8905;MQ=69.68;MQ0=10;MQRankSum=-2.385;QD=24.39;ReadPosRankSum=2.096;VQSLOD=4.7318;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,111,1421	1/1:1,4:5:12.04:154,12,0	0/0:36,0:17:31.55:0,32,298	0/1:40,0:22:27.19:27,0,219	0/0:23,0:23:59.94:0,60,720	1/1:3,14:17:35.85:435,36,0	1/1:4,19:23:51.17:658,51,0	1/1:8,40:48:99:1263,111,0	0/0:11,0:11:33.01:0,33,359	1/1:0,23:23:53.84:645,54,0	1/1:2,11:13:27:325,27,0	1/1:0,13:13:30.10:386,30,0	0/0:21,0:21:47.96:0,48,619	1/1:2,8:10:17.23:315,17,0	1/1:5,11:16:39.16:475,39,0	1/1:1,14:15:30.10:383,30,0	1/1:0,19:19:42.14:539,42,0	1/1:3,18:21:50.57:605,51,0	1/1:0,10:10:30.10:384,30,0	1/1:5,23:28:50.64:571,51,0	1/1:5,6:11:27.01:300,27,0	1/1:1,9:10:21.07:268,21,0	0/0:16,0:16:47.87:0,48,536	0/0:15,0:15:39.91:0,40,484	1/1:4,8:12:8.70:196,9,0	1/1:10,14:24:58.36:675,58,0	1/1:9,18:26:62.52:780,63,0	1/1:2,9:11:27:324,27,0
chr10	68392704	.	TC	T	12505.47	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=16.516;DP=563;FS=1.099;HRun=2;HaplotypeScore=111.2278;InbreedingCoeff=0.9988;MQ=65.12;MQ0=0;MQRankSum=-4.500;QD=32.74;ReadPosRankSum=2.845;VQSLOD=4.6284;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:96.28:0,96,1369	1/1:0,10:10:27.04:323,27,0	0/0:25,0:24:58.90:0,59,719	0/0:14,0:13:30.06:0,30,392	0/0:21,0:21:63.19:0,63,903	1/1:0,23:23:63.20:812,63,0	1/1:0,18:18:42.14:544,42,0	1/1:1,20:18:42.03:489,42,0	0/0:17,0:17:51.17:0,51,763	1/1:0,25:25:75.20:950,75,0	1/1:1,26:27:69.05:846,69,0	1/1:0,25:25:69.22:885,69,0	0/0:29,0:29:87.25:0,87,1239	1/1:0,13:13:24.08:311,24,0	1/1:0,16:16:48.15:613,48,0	1/1:1,24:25:60.19:778,60,0	1/1:0,21:21:57.19:739,57,0	1/1:0,23:23:63.20:816,63,0	1/1:1,14:13:36.04:405,36,0	1/1:1,12:13:38.99:452,39,0	1/1:1,15:16:33.11:420,33,0	1/1:0,10:10:24.08:302,24,0	0/0:21,0:21:63.13:0,63,896	0/0:19,0:19:57.15:0,57,806	1/1:0,15:15:42.14:544,42,0	1/1:2,23:25:69.21:878,69,0	1/1:1,31:32:81.26:1047,81,0	1/1:0,9:9:27.09:350,27,0
chr10	68394404	.	TA	T	2018.95	PASS	AB=0.710;AC=33;AF=0.589;AN=56;BaseQRankSum=6.200;DP=403;FS=0.522;HRun=15;HaplotypeScore=42.1495;InbreedingCoeff=0.2290;MQ=62.58;MQ0=17;MQRankSum=-0.508;QD=6.43;ReadPosRankSum=1.875;VQSLOD=1.9921;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,1:27:37.93:0,38,388	0/1:4,3:7:14.51:46,0,15	0/0:19,0:5:5.22:0,5,32	0/1:13,0:8:3.84:4,0,37	0/0:16,0:15:20.99:0,21,182	0/1:4,14:20:0.11:177,0,0	1/1:7,9:16:17.69:116,18,0	1/1:14,14:26:40.13:252,40,0	0/0:10,0:10:23.99:0,24,208	1/1:10,8:15:21.80:136,22,0	0/1:4,8:12:2.77:110,0,3	1/1:1,7:8:11.81:77,12,0	0/0:4,0:4:9:0,9,79	1/1:5,3:8:2.92:19,3,0	1/1:4,10:14:23.55:154,24,0	1/1:3,6:9:17.71:115,18,0	0/1:12,14:27:19.99:119,0,20	0/1:23,3:26:25.71:26,0,307	0/1:6,10:15:11.55:140,0,12	0/1:8,8:16:3.03:99,0,3	0/1:2,3:5:14.75:30,0,15	1/1:0,4:4:5.82:38,6,0	0/0:11,0:11:17.91:0,18,145	0/1:5,1:6:7.28:7,0,63	1/1:4,5:9:8.85:58,9,0	0/1:11,13:24:29.80:186,0,30	1/1:5,6:12:16.74:102,17,0	1/1:3,9:11:29.54:191,30,0
chr10	68395920	.	ATTTT	A	8195.07	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=7.817;DP=543;FS=0.000;HRun=17;HaplotypeScore=97.0637;InbreedingCoeff=0.9431;MQ=65.55;MQ0=0;MQRankSum=-0.149;QD=20.85;ReadPosRankSum=8.372;VQSLOD=3.1150;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:41:99:0,99,1676	1/1:3,5:8:5.76:76,6,0	0/0:15,0:10:6.02:0,6,68	0/0:6,0:4:6.02:0,6,100	0/0:17,0:19:54.93:0,55,921	1/1:4,10:14:20.92:266,21,0	1/1:2,13:15:23.87:304,24,0	1/1:13,13:27:33.63:442,34,0	0/0:8,0:14:30.08:0,30,521	1/1:3,0:23:54.29:405,54,0	1/1:3,0:16:23.47:186,23,0	1/1:3,12:17:29.99:351,30,0	0/0:11,0:11:30.08:0,30,541	1/1:7,10:19:24.53:323,25,0	1/1:2,15:18:29.93:365,30,0	1/1:7,14:22:41.69:517,42,0	1/1:3,24:28:33.35:645,33,0	1/1:3,0:12:26.82:210,27,0	1/1:7,7:17:24.78:265,25,0	1/1:7,13:20:26.53:341,27,0	1/1:8,18:26:29.40:412,29,0	1/1:7,13:20:26.41:327,26,0	0/0:19,0:25:66.21:0,66,1234	0/0:10,0:18:39.04:0,39,670	1/1:1,25:26:69.11:874,69,0	1/1:3,15:19:45:550,45,0	1/1:3,23:28:65.79:806,66,0	1/1:1,17:18:42.04:532,42,0
chr10	68397706	.	T	TCTC	887.21	PASS	AB=0.962;AC=22;AF=0.440;AN=50;BaseQRankSum=6.290;DP=359;FS=0.623;HRun=0;HaplotypeScore=87.2235;InbreedingCoeff=-0.0017;MQ=36.30;MQ0=25;MQRankSum=-5.870;QD=3.86;ReadPosRankSum=-0.068;VQSLOD=1.6345;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:9:14.78:0,15,197	./.	./.	./.	0/0:15,0:14:17.96:0,18,174	0/1:15,0:17:21.69:46,0,22	0/1:16,2:17:8.77:9,0,11	1/1:18,0:14:14.28:137,14,0	0/0:8,0:8:18.05:0,18,209	0/1:9,0:8:44.11:44,0,45	0/1:9,0:7:9.37:9,0,11	0/1:10,1:11:3.10:156,0,3	0/0:10,0:10:21.32:0,21,320	1/1:9,0:9:10.84:59,11,0	0/1:10,0:10:10.64:44,0,11	0/1:19,1:20:6.28:214,0,6	0/0:15,0:12:0.09:0,0,16	1/1:10,0:4:5.74:29,6,0	0/1:12,0:12:49.90:52,0,50	0/1:12,0:11:10.87:18,0,11	1/1:6,1:7:5.68:30,6,0	0/0:8,0:5:2.79:0,3,27	0/0:12,0:12:14.90:0,15,163	0/0:34,0:32:78.71:0,79,1105	1/1:14,1:14:15.89:120,16,0	0/1:14,0:12:39.56:40,0,84	0/1:23,0:23:23.98:24,0,95	0/1:13,0:10:16.33:16,0,48
chr10	68398036	.	CTT	C	1473.30	PASS	AB=0.599;AC=24;AF=0.480;AN=50;BaseQRankSum=0.072;DP=273;FS=5.434;HRun=2;HaplotypeScore=42.4501;InbreedingCoeff=0.7615;MQ=79.31;MQ0=11;MQRankSum=0.975;QD=16.55;ReadPosRankSum=0.173;VQSLOD=0.8846;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:21:60.14:0,60,996	0/1:1,0:2:0:0,0,0	0/0:23,0:15:32.77:0,33,561	0/0:21,0:15:8.99:0,9,324	0/0:17,0:15:30.07:0,30,491	1/1:7,0:8:14.18:173,14,0	1/1:8,0:7:15.05:209,15,0	0/0:13,0:12:36.12:0,36,605	0/0:6,0:6:15.05:0,15,263	0/0:19,0:19:51.17:0,51,852	0/0:9,0:9:21.07:0,21,289	1/1:9,0:8:12.04:180,12,0	0/0:7,0:7:21.07:0,21,356	1/1:3,0:3:6.02:89,6,0	1/1:4,0:4:6.02:87,6,0	./.	1/1:6,0:6:12.04:177,12,0	0/0:9,0:7:18.06:0,18,263	1/1:0,9:9:21.02:266,21,0	1/1:2,8:9:5.62:57,6,0	1/1:5,0:5:6.01:72,6,0	./.	0/0:14,0:13:33.07:0,33,519	0/0:17,0:17:42.14:0,42,715	1/1:3,0:3:3.01:47,3,0	0/1:2,15:16:29.88:190,0,30	1/1:5,0:5:9.48:114,9,0	./.
chr10	68398837	.	C	CTTTT	4870.18	PASS	AB=0.964;AC=43;AF=0.768;AN=56;BaseQRankSum=-2.248;DP=588;FS=1.834;HRun=16;HaplotypeScore=105.2100;InbreedingCoeff=0.3456;MQ=58.79;MQ0=5;MQRankSum=-1.095;QD=9.24;ReadPosRankSum=-6.678;VQSLOD=-0.6052;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:41,0:44:79.32:79,0,327	1/1:4,0:7:2.22:7,2,0	0/0:11,0:9:2.05:0,2,9	0/0:10,0:9:1.19:0,1,40	0/1:28,0:32:6.53:7,0,291	1/1:1,16:25:9.03:161,9,0	1/1:18,0:17:29.84:264,30,0	1/1:12,0:29:46.70:362,47,0	0/0:18,0:23:14.16:0,14,174	1/1:2,1:21:41.93:453,42,0	1/1:5,0:16:9.65:110,10,0	1/1:11,0:11:12.88:154,13,0	0/1:14,0:16:2.46:2,0,82	1/1:4,13:19:4.57:63,5,0	1/1:26,0:26:50.14:563,50,0	1/1:3,9:15:2.97:20,3,0	1/1:24,0:23:27.44:306,27,0	0/0:16,0:16:32.84:0,33,363	1/1:23,0:20:32.88:334,33,0	1/1:4,2:31:41.25:370,41,0	1/1:17,0:17:26.90:220,27,0	1/1:11,0:11:24.02:307,24,0	0/1:24,0:25:40.93:41,0,123	0/1:16,0:17:27.42:27,0,66	1/1:2,0:25:2.97:20,3,0	1/1:11,20:36:63.77:708,64,0	1/1:2,0:13:5.23:62,5,0	1/1:6,0:19:18.04:230,18,0
chr10	68399954	.	C	CTTTTTATTTATTTA	3723.83	PASS	AB=0.978;AC=21;AF=0.375;AN=56;BaseQRankSum=-2.293;DP=307;FS=31.462;HRun=0;HaplotypeScore=152.2947;InbreedingCoeff=-0.2252;MQ=68.04;MQ0=11;MQRankSum=-4.715;QD=16.77;ReadPosRankSum=-2.993;VQSLOD=0.5974;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:42.14:0,42,1242	0/1:3,0:3:34.52:35,0,84	0/0:8,0:4:12.04:0,12,160	0/0:14,0:12:5.30:0,5,288	0/0:20,0:20:57.17:0,57,1422	0/1:9,0:9:40.71:41,0,503	0/0:5,0:5:4.15:0,4,113	1/1:12,0:23:51.15:832,51,0	0/0:3,0:3:6.02:0,6,238	0/1:12,0:11:99:108,0,490	0/1:15,0:14:99:109,0,333	0/1:6,0:6:38.26:106,0,38	0/0:4,0:4:12.04:0,12,419	0/1:4,0:4:26.93:27,0,84	0/1:7,0:8:63.05:63,0,300	0/1:6,0:6:28.23:28,0,254	0/1:18,0:18:79.85:80,0,719	1/1:8,9:17:21.07:1385,21,0	0/1:10,0:10:43.92:109,0,44	0/1:14,0:12:99:101,0,279	0/0:5,0:5:4.87:0,5,176	1/1:4,0:4:11.94:115,12,0	0/0:3,0:3:9.02:0,9,109	0/0:3,0:3:6.02:0,6,164	0/1:12,0:12:90.77:91,0,368	0/1:18,0:18:99:240,0,229	0/1:14,0:14:99:99,0,444	0/1:15,0:15:99:156,0,641
chr10	68399956	.	TTA	T	5617.18	PASS	AB=1.000;AC=37;AF=0.661;AN=56;BaseQRankSum=8.079;DP=291;FS=5.201;HRun=0;HaplotypeScore=69.4589;InbreedingCoeff=0.7751;MQ=68.40;MQ0=11;MQRankSum=-4.548;QD=27.81;ReadPosRankSum=2.054;VQSLOD=5.7567;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:42.14:0,42,706	1/1:3,0:3:6.02:82,6,0	0/0:8,0:4:12.04:0,12,160	0/0:14,0:12:4.32:0,4,250	0/0:21,0:21:60.20:0,60,1012	1/1:9,0:9:27.08:354,27,0	1/1:6,0:5:9.50:124,10,0	0/1:29,0:19:99:260,0,272	0/0:3,0:3:6.02:0,6,114	1/1:0,10:9:27.09:410,27,0	1/1:0,13:12:27.09:412,27,0	1/1:6,0:6:18.01:200,18,0	0/0:4,0:4:12.04:0,12,213	1/1:4,0:4:6.49:74,6,0	1/1:8,0:7:18.06:244,18,0	1/1:6,0:6:10.83:164,11,0	1/1:19,0:19:51.09:643,51,0	0/0:14,0:13:20.69:0,21,209	1/1:9,0:8:15.52:203,16,0	1/1:13,0:11:28.43:354,28,0	1/1:4,0:4:5.30:47,5,0	1/1:4,0:4:11.94:115,12,0	0/0:3,0:3:9.02:0,9,109	0/0:3,0:3:6.02:0,6,99	1/1:13,0:12:28.55:406,29,0	1/1:16,1:17:37.49:479,37,0	1/1:14,0:14:35.63:460,36,0	1/1:15,0:15:45.09:588,45,0
chr10	68399957	.	TA	T	3192.96	PASS	AB=1.000;AC=38;AF=0.679;AN=56;BaseQRankSum=9.850;DP=295;FS=1.159;HRun=1;HaplotypeScore=72.7782;InbreedingCoeff=0.7792;MQ=68.01;MQ0=11;MQRankSum=-4.047;QD=14.58;ReadPosRankSum=1.504;VQSLOD=3.2657;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:42.14:0,42,627	1/1:1,2:3:8.97:71,9,0	0/0:8,0:4:12.04:0,12,171	0/1:14,0:12:5.49:5,0,210	0/0:21,0:21:60.12:0,60,874	1/1:1,8:9:26.99:240,27,0	1/1:1,5:5:11.96:103,12,0	0/1:29,0:19:4.19:4,0,216	0/0:3,0:3:6.02:0,6,92	1/1:10,0:9:25.62:130,26,0	1/1:14,0:13:25.44:122,25,0	1/1:2,4:6:17.90:141,18,0	0/0:4,0:4:12.04:0,12,182	1/1:0,4:4:8.89:74,9,0	1/1:2,6:7:17.95:146,18,0	1/1:2,4:6:12.01:101,12,0	1/1:5,15:20:50.74:406,51,0	0/0:14,0:13:20.27:0,20,189	1/1:4,5:8:20.92:164,21,0	1/1:2,11:11:29.91:242,30,0	1/1:1,3:4:8.15:71,8,0	1/1:0,4:4:11.81:77,12,0	0/0:3,0:3:9.02:0,9,113	0/0:3,0:3:6.02:0,6,90	1/1:3,10:12:33.74:260,34,0	1/1:7,10:17:42.62:288,43,0	1/1:4,10:14:41.93:367,42,0	1/1:1,15:16:44.86:377,45,0
chr10	68399961	.	TA	T	2837.41	PASS	AB=1.000;AC=33;AF=0.589;AN=56;BaseQRankSum=10.671;DP=306;FS=0.515;HRun=1;HaplotypeScore=77.0614;InbreedingCoeff=0.8254;MQ=61.22;MQ0=11;MQRankSum=-7.185;QD=16.21;ReadPosRankSum=0.463;VQSLOD=3.6029;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:39.11:0,39,565	1/1:1,2:3:8.97:71,9,0	0/0:7,0:4:12.02:0,12,156	0/1:11,0:9:18.99:19,0,162	0/0:24,0:24:60.16:0,60,831	1/1:2,8:10:26.98:239,27,0	1/1:2,4:5:11.96:103,12,0	0/0:28,0:18:48.11:0,48,588	0/0:3,0:3:6.02:0,6,92	0/0:11,0:9:25.39:0,25,181	0/0:16,0:15:26.40:0,26,165	1/1:2,3:5:14.93:120,15,0	0/0:4,0:4:12.03:0,12,163	1/1:3,2:5:8.87:75,9,0	1/1:1,6:6:17.93:145,18,0	1/1:3,4:7:11.71:101,12,0	1/1:7,15:21:47.79:386,48,0	0/0:13,0:11:21.07:0,21,300	1/1:5,5:9:23.89:183,24,0	1/1:2,11:11:29.91:244,30,0	1/1:2,2:4:8.82:73,9,0	1/1:3,2:4:8.85:58,9,0	0/0:2,0:2:6.02:0,6,88	0/0:2,0:2:6.02:0,6,88	1/1:5,8:10:29.87:236,30,0	1/1:9,9:18:20.53:270,21,0	1/1:8,8:15:38.53:310,39,0	1/1:5,15:20:50.78:419,51,0
chr10	68400757	.	C	CTATT	3019.66	PASS	AC=32;AF=0.762;AN=42;BaseQRankSum=-4.962;DP=292;FS=1.171;HRun=0;HaplotypeScore=47.5344;InbreedingCoeff=0.5378;MQ=58.34;MQ0=2;MQRankSum=0.428;QD=15.65;ReadPosRankSum=-1.267;VQSLOD=2.9447;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:14:6.01:0,6,56	1/1:3,0:3:3.01:70,3,0	./.	./.	0/0:9,0:17:21.02:0,21,196	1/1:7,5:12:15.05:350,15,0	./.	./.	0/0:8,0:9:3:0,3,28	1/1:14,0:14:3.01:66,3,0	1/1:6,0:9:12:173,12,0	1/1:8,1:9:3.01:70,3,0	0/0:9,0:9:12.02:0,12,159	1/1:7,1:8:6.02:137,6,0	1/1:7,1:8:3.01:70,3,0	./.	1/1:10,17:27:33.11:771,33,0	1/1:10,8:18:21.07:491,21,0	1/1:10,2:11:9.03:202,9,0	1/1:12,2:14:6.02:140,6,0	1/1:7,1:8:2.64:70,3,0	./.	./.	0/0:3,0:3:3.01:0,3,46	1/1:9,3:12:6.02:140,6,0	1/1:14,4:17:9.03:211,9,0	1/1:7,2:9:3.01:70,3,0	1/1:11,0:11:9.03:126,9,0
chr10	68401600	.	GAA	G	15158.02	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=17.803;DP=656;FS=3.147;HRun=6;HaplotypeScore=145.4798;InbreedingCoeff=0.9976;MQ=84.36;MQ0=0;MQRankSum=-4.149;QD=34.53;ReadPosRankSum=0.802;VQSLOD=3.3091;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,148,2644	1/1:0,13:13:39.13:520,39,0	0/0:21,0:21:57.20:0,57,1018	0/0:23,0:23:63.22:0,63,1108	0/0:21,0:21:54.19:0,54,968	1/1:3,21:24:63.21:841,63,0	1/1:3,18:21:45.14:600,45,0	1/1:3,31:34:93.27:1210,93,0	0/0:20,1:21:20.18:0,20,987	1/1:1,30:31:90.27:1183,90,0	1/1:2,10:12:30.09:400,30,0	1/1:0,25:25:72.24:961,72,0	0/0:29,0:29:84.29:0,84,1512	1/1:1,22:23:63.21:840,63,0	1/1:3,24:27:72.23:960,72,0	1/1:3,18:21:54.17:720,54,0	1/1:2,19:21:51.17:680,51,0	1/1:2,23:25:57.19:760,57,0	1/1:5,12:17:33.10:440,33,0	1/1:1,25:26:72.23:960,72,0	1/1:0,27:27:72.24:961,72,0	1/1:2,18:20:54.18:720,54,0	0/0:14,0:14:42.14:0,42,756	0/0:37,0:37:99:0,108,1933	1/1:2,11:13:30.10:400,30,0	1/1:4,28:31:78.25:1040,78,0	1/1:2,18:20:54.17:720,54,0	1/1:1,6:7:18.06:240,18,0
chr10	68401866	.	C	CT	2851.76	PASS	AB=0.649;AC=29;AF=0.518;AN=56;BaseQRankSum=-3.769;DP=559;FS=5.416;HRun=14;HaplotypeScore=69.5882;InbreedingCoeff=0.5057;MQ=64.50;MQ0=1;MQRankSum=1.654;QD=8.97;ReadPosRankSum=0.773;VQSLOD=2.9896;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:41:67.89:0,68,421	0/1:5,6:10:2.40:67,0,2	1/1:8,0:7:2.96:19,3,0	0/0:12,0:8:2.48:0,2,22	0/0:25,0:28:40.20:0,40,254	1/1:1,11:14:26.68:213,27,0	1/1:5,12:18:10.57:206,11,0	0/0:31,1:31:14.24:0,14,211	0/0:11,0:15:21.77:0,22,126	0/0:29,0:29:30.94:0,31,304	0/0:20,0:20:28.71:0,29,185	0/1:5,12:17:11.58:150,0,12	0/0:25,1:26:20.50:0,20,250	1/1:2,8:11:11.84:93,12,0	0/1:7,14:21:1.19:219,0,1	1/1:5,11:16:26.99:237,27,0	1/1:10,21:31:15.42:376,15,0	0/0:24,0:23:62.03:0,62,402	0/1:14,13:26:18.74:212,0,19	1/1:12,18:32:9.72:223,10,0	0/1:4,4:8:21.69:41,0,22	1/1:5,6:10:15:132,15,0	0/0:14,0:13:14.58:0,15,84	0/1:6,2:8:11.55:12,0,62	1/1:17,10:26:16.95:242,17,0	1/1:21,11:31:38.94:334,39,0	1/1:5,11:16:21:184,21,0	0/1:2,6:8:4.27:90,0,4
chr10	68402035	.	CA	C	12193.83	PASS	AB=0.586;AC=38;AF=0.679;AN=56;BaseQRankSum=6.492;DP=566;FS=3.998;HRun=1;HaplotypeScore=57.8823;InbreedingCoeff=0.8371;MQ=48.37;MQ0=52;MQRankSum=1.171;QD=30.41;ReadPosRankSum=0.709;VQSLOD=4.4780;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:42:99:0,102,1628	1/1:0,4:4:9.03:126,9,0	0/0:8,0:6:6.05:0,6,181	0/0:5,0:3:9.03:0,9,144	0/0:15,0:15:33.11:0,33,508	0/1:3,20:21:2.59:542,0,3	1/1:1,23:23:54.18:755,54,0	1/1:2,25:23:43.26:896,43,0	0/0:20,0:20:54.18:0,54,863	1/1:0,21:20:60.20:837,60,0	1/1:1,17:16:33.11:449,33,0	1/1:2,24:24:62.93:836,63,0	0/0:20,0:20:54.18:0,54,856	1/1:0,19:19:42.14:587,42,0	1/1:1,22:22:51.10:691,51,0	1/1:0,21:21:60.20:832,60,0	0/1:12,16:21:6.21:591,0,6	1/1:7,12:12:30.10:419,30,0	1/1:2,27:25:69.20:927,69,0	1/1:1,14:14:36.12:501,36,0	1/1:10,18:18:48.16:671,48,0	1/1:0,6:6:15.05:210,15,0	0/0:11,0:9:15.05:0,15,240	0/0:39,0:33:93.32:0,93,1464	1/1:1,10:10:21.07:294,21,0	1/1:1,26:26:75.21:1025,75,0	1/1:2,19:19:45.15:629,45,0	1/1:2,9:9:27.09:377,27,0
chr10	68402404	.	CCA	C	113.53	PASS	AB=0.946;AC=11;AF=0.212;AN=52;BaseQRankSum=-1.029;DP=500;FS=2.355;HRun=0;HaplotypeScore=76.4252;InbreedingCoeff=0.2798;MQ=60.93;MQ0=35;MQRankSum=-0.039;QD=0.84;ReadPosRankSum=-1.980;VQSLOD=1.5119;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:21:25.45:25,0,38	0/0:7,0:6:11.90:0,12,87	./.	./.	0/0:10,0:10:12.04:0,12,178	0/0:8,0:15:9:0,9,79	0/0:26,0:25:22.78:0,23,203	1/1:25,0:23:2.74:12,3,0	0/0:17,0:22:12:0,12,105	1/1:11,4:14:9.32:80,9,0	1/1:8,5:13:8.86:79,9,0	0/0:12,0:16:15.02:0,15,157	0/1:12,1:12:17.37:17,0,153	0/0:5,0:9:12.01:0,12,112	0/0:5,0:18:29.94:0,30,275	0/0:8,0:13:16.46:0,16,127	0/0:13,0:23:23.98:0,24,204	0/1:16,3:18:31.71:32,0,360	0/0:11,0:10:14.57:0,15,141	0/0:14,0:17:8.99:0,9,76	0/0:19,0:25:6:0,6,52	0/0:10,0:13:6.68:0,7,93	0/1:10,0:8:1.49:1,0,80	0/0:19,0:19:18.06:0,18,250	0/0:8,0:10:6:0,6,52	0/1:7,1:14:2.56:3,0,218	0/0:14,0:21:6.74:0,7,38	0/0:7,0:9:6:0,6,52
chr10	68402726	.	A	ACAAG	1826.65	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-5.103;DP=666;FS=3.593;HRun=0;HaplotypeScore=120.0639;InbreedingCoeff=0.9938;MQ=66.32;MQ0=0;MQRankSum=-2.189;QD=53.73;ReadPosRankSum=2.774;VQSLOD=5.1993;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:47:94.13:0,94,1661	0/0:9,0:9:27.09:0,27,418	0/0:36,0:32:27.10:0,27,505	0/0:33,0:32:42.01:0,42,589	0/0:21,0:21:45.10:0,45,662	0/0:25,0:25:69.18:0,69,1032	0/0:21,0:21:44.84:0,45,713	0/0:37,0:36:51.14:0,51,754	0/0:17,0:17:42.14:0,42,699	0/0:15,0:15:39.13:0,39,627	0/0:13,0:13:36.09:0,36,550	0/0:22,0:22:48.16:0,48,799	0/0:18,0:18:45.14:0,45,721	0/0:28,0:28:66.20:0,66,1038	0/0:26,0:26:69.16:0,69,1018	0/0:19,0:19:30.08:0,30,445	0/0:27,0:27:57.14:0,57,893	1/1:6,28:34:78.27:1922,78,0	0/0:16,0:16:27.06:0,27,372	0/0:14,0:14:39.11:0,39,621	0/0:43,0:43:99:0,99,1565	0/0:11,0:11:23.99:0,24,345	0/0:19,0:19:45.11:0,45,719	0/0:23,0:23:36.12:0,36,599	0/0:20,0:20:51.09:0,51,767	0/0:28,0:28:60.18:0,60,928	0/0:29,0:29:72.22:0,72,1132	0/0:15,0:15:39.10:0,39,564
chr10	68403136	.	GA	G	1022.93	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=5.572;DP=512;FS=7.408;HRun=11;HaplotypeScore=69.5561;InbreedingCoeff=0.9748;MQ=64.22;MQ0=8;MQRankSum=0.339;QD=17.05;ReadPosRankSum=1.659;VQSLOD=4.6964;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,111,1147	0/0:10,0:10:24.03:0,24,244	0/0:12,0:8:17.76:0,18,145	0/0:10,0:5:14.85:0,15,132	0/0:29,0:29:66.12:0,66,687	0/0:12,0:11:32.92:0,33,323	0/0:14,0:14:14.56:0,15,359	0/0:6,0:24:57.58:0,58,304	0/0:12,0:12:32.57:0,33,328	1/1:0,14:14:41.94:342,42,0	1/1:5,20:24:56.92:467,57,0	0/0:15,0:16:38.88:0,39,372	0/0:15,0:15:35.30:0,35,356	0/0:7,0:7:18.05:0,18,192	0/0:24,0:24:69.17:0,69,733	0/0:15,0:15:40.34:0,40,419	0/0:32,0:32:89.40:0,89,917	1/1:4,17:21:35.67:357,36,0	0/0:21,0:21:29.86:0,30,432	0/0:17,0:17:17.54:0,18,390	0/0:12,0:12:26.98:0,27,272	0/0:15,0:15:30.07:0,30,319	0/0:20,1:21:57.14:0,57,607	0/0:21,0:20:51.13:0,51,542	0/0:24,1:25:60.11:0,60,626	0/0:14,1:15:20.47:0,20,422	0/0:19,0:18:42.08:0,42,437	0/0:9,0:9:24.06:0,24,252
chr10	68404100	.	T	TG	973.51	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-2.292;DP=573;FS=1.345;HRun=5;HaplotypeScore=91.1398;InbreedingCoeff=0.9805;MQ=81.48;MQ0=0;MQRankSum=-0.785;QD=30.42;ReadPosRankSum=-1.539;VQSLOD=3.2968;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,114,1253	0/0:8,0:8:18.03:0,18,184	0/0:36,0:33:50.19:0,50,521	0/0:39,1:35:14.71:0,15,503	0/0:20,0:20:57.10:0,57,596	0/0:29,0:29:81.18:0,81,854	0/0:13,0:13:36.09:0,36,386	0/0:25,0:25:57.19:0,57,615	0/0:13,0:13:36.07:0,36,372	1/1:6,11:17:51.13:629,51,0	1/1:4,11:15:39.03:466,39,0	0/0:13,0:13:33.08:0,33,354	0/0:19,0:19:51.13:0,51,548	0/0:19,0:19:54.13:0,54,573	0/0:18,0:18:54.12:0,54,571	0/0:16,0:16:42.07:0,42,429	0/0:37,0:37:93.23:0,93,999	0/0:26,0:26:69.13:0,69,722	0/0:24,0:24:69.15:0,69,732	0/0:18,0:18:39.08:0,39,412	0/0:22,0:22:60.13:0,60,634	0/0:6,0:6:18:0,18,180	0/0:21,0:21:48.08:0,48,496	0/0:13,0:13:39.09:0,39,411	0/0:11,0:11:23.97:0,24,220	0/0:24,0:24:63.15:0,63,673	0/0:15,0:15:33.07:0,33,346	0/0:8,0:8:24.06:0,24,257
chr10	68406350	.	T	TC	17317.93	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-16.605;DP=673;FS=4.497;HRun=1;HaplotypeScore=57.1885;InbreedingCoeff=0.9983;MQ=83.54;MQ0=0;MQRankSum=-3.945;QD=40.37;ReadPosRankSum=5.438;VQSLOD=5.1188;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:78.21:0,78,980	1/1:0,7:7:18.03:246,18,0	0/0:24,0:24:59.33:0,59,748	0/0:15,0:15:22.44:0,22,389	0/0:33,0:33:99:0,99,1269	1/1:0,30:30:87.29:1303,87,0	1/1:0,31:31:81.27:1207,81,0	0/0:31,0:31:93.29:0,93,1175	0/0:33,0:33:99:0,99,1257	1/1:0,31:30:93.30:1372,93,0	1/1:0,27:27:78.21:1141,78,0	1/1:0,25:25:69.23:1033,69,0	0/0:21,0:21:63.20:0,63,818	1/1:0,25:25:66.22:989,66,0	1/1:0,26:26:69.23:1034,69,0	1/1:1,19:20:51.17:764,51,0	1/1:1,25:26:63.21:944,63,0	0/0:14,0:14:42.14:0,42,544	1/1:1,25:26:75.20:1044,75,0	1/1:0,23:23:66.22:987,66,0	1/1:2,28:30:78.26:1169,78,0	1/1:0,16:16:39.13:584,39,0	0/0:21,0:21:60.19:0,60,766	0/0:24,0:24:72.19:0,72,890	1/1:0,21:21:54.18:809,54,0	1/1:0,15:15:42.14:629,42,0	1/1:1,36:37:99:1526,102,0	1/1:0,13:13:36.12:539,36,0
chr10	68406858	.	C	CA	11156.25	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-8.312;DP=568;FS=51.482;HRun=2;HaplotypeScore=59.1624;InbreedingCoeff=0.9987;MQ=60.52;MQ0=1;MQRankSum=-6.039;QD=37.44;ReadPosRankSum=3.733;VQSLOD=1.1728;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:20:51.16:0,51,632	1/1:0,10:10:27.09:388,27,0	0/0:25,0:21:54.05:0,54,635	0/0:30,0:28:84.25:0,84,1019	0/0:30,0:29:90.27:0,90,1102	1/1:3,26:29:66.22:949,66,0	1/1:1,19:20:54.18:777,54,0	0/0:46,0:46:99:0,138,1659	0/0:42,0:42:99:0,117,1450	1/1:1,20:21:60.20:859,60,0	1/1:0,19:19:54.18:749,54,0	1/1:0,11:11:27.09:387,27,0	0/0:15,0:15:45.14:0,45,558	1/1:1,11:12:30.10:423,30,0	1/1:0,19:19:57.19:819,57,0	1/1:0,10:10:27.09:388,27,0	1/1:2,18:20:45.15:647,45,0	0/0:11,0:11:33.04:0,33,389	1/1:2,14:15:42.14:597,42,0	1/1:2,16:18:48.16:682,48,0	1/1:0,25:25:69.23:993,69,0	1/1:1,18:19:51.17:734,51,0	0/0:19,0:19:57.15:0,57,691	0/0:30,0:30:90.28:0,90,1115	1/1:0,13:13:30.10:432,30,0	1/1:1,13:14:39.13:555,39,0	1/1:1,13:14:33.11:474,33,0	1/1:1,7:8:21.07:302,21,0
chr10	68407881	.	TGACG	T	18572.09	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=13.557;DP=675;FS=35.240;HRun=0;HaplotypeScore=119.3120;InbreedingCoeff=0.9999;MQ=84.48;MQ0=0;MQRankSum=-5.836;QD=44.11;ReadPosRankSum=6.609;VQSLOD=3.4065;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,129,2918	1/1:1,15:16:45.15:785,45,0	0/0:36,0:36:74.01:0,74,1569	0/0:24,0:24:66.22:0,66,1471	0/0:26,0:26:66.21:0,66,1664	1/1:1,26:27:69.24:1255,69,0	1/1:5,19:24:39.13:693,39,0	0/0:29,0:29:63.22:0,63,1624	0/0:14,0:14:36.12:0,36,935	1/1:5,20:25:66.22:1171,66,0	1/1:6,20:26:66.23:1181,66,0	1/1:2,20:22:60.21:1091,60,0	0/0:21,0:21:57.20:0,57,1478	1/1:1,26:27:75.26:1347,75,0	1/1:0,30:30:81.28:1473,81,0	1/1:5,13:18:33.11:583,33,0	1/1:0,25:25:63.22:1144,63,0	0/0:19,0:19:54.19:0,54,1390	1/1:2,13:15:39.10:671,39,0	1/1:0,24:24:69.24:1240,69,0	1/1:11,23:34:72.25:1274,72,0	1/1:3,20:23:51.17:871,51,0	0/0:15,0:15:42.14:0,42,1072	0/0:24,0:24:72.25:0,72,1841	1/1:0,16:16:33.11:598,33,0	1/1:3,32:35:99:1755,99,0	1/1:3,16:19:36.12:655,36,0	1/1:0,15:15:45.15:787,45,0
chr10	68408352	.	A	AT	5888.89	PASS	AB=0.669;AC=33;AF=0.589;AN=56;BaseQRankSum=4.584;DP=521;FS=18.666;HRun=11;HaplotypeScore=116.2918;InbreedingCoeff=0.7341;MQ=63.26;MQ0=3;MQRankSum=-7.729;QD=17.90;ReadPosRankSum=0.431;VQSLOD=4.0076;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:31:73.74:0,74,563	1/1:0,5:5:15.03:152,15,0	0/0:12,0:11:5.92:0,6,45	0/0:15,0:8:7.05:0,7,37	0/0:22,0:24:48.87:0,49,360	1/1:4,10:14:39:374,39,0	0/1:7,8:15:16.42:213,0,16	0/0:3,0:25:42.09:0,42,120	0/0:14,0:15:37.89:0,38,282	1/1:13,15:29:47.89:460,48,0	0/1:8,8:16:10.43:262,0,10	1/1:5,5:10:18:172,18,0	0/0:12,0:12:26.88:0,27,207	1/1:4,7:11:18.04:183,18,0	1/1:10,13:23:39.04:385,39,0	1/1:3,9:12:30.02:294,30,0	1/1:9,14:23:1.62:380,2,0	0/0:25,0:28:53.86:0,54,389	1/1:16,11:27:27.31:405,27,0	1/1:7,19:26:21.89:381,22,0	1/1:2,10:12:24.01:233,24,0	0/1:6,5:11:5.20:134,0,5	0/0:14,0:15:25.92:0,26,192	0/0:14,0:14:35.86:0,36,279	1/1:9,18:27:33.89:525,34,0	1/1:5,20:25:54.09:540,54,0	1/1:9,20:29:10.79:471,11,0	1/1:3,11:14:33.03:325,33,0
chr10	68408380	.	TA	T	2780.91	PASS	AB=0.995;AC=29;AF=0.518;AN=56;BaseQRankSum=15.447;DP=549;FS=6.947;HRun=1;HaplotypeScore=141.3674;InbreedingCoeff=0.4436;MQ=59.27;MQ0=15;MQRankSum=-14.549;QD=9.39;ReadPosRankSum=5.326;VQSLOD=1.3572;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:69.31:0,69,1051	1/1:6,0:6:6.47:27,6,0	0/0:46,1:18:0.89:0,1,214	0/0:47,0:16:2.46:0,2,142	0/0:17,0:17:51.04:0,51,555	1/1:19,0:18:44.02:166,44,0	1/1:15,0:15:12.47:106,12,0	0/0:38,0:38:99:0,111,1391	0/0:16,0:16:45.13:0,45,580	1/1:6,18:23:66.06:810,66,0	1/1:4,13:16:40.73:502,41,0	1/1:10,1:11:28.42:150,28,0	0/0:7,0:7:20.96:0,21,242	1/1:10,0:10:22.74:86,23,0	0/1:14,0:14:21.56:73,0,22	1/1:13,0:13:29.41:126,29,0	0/1:23,0:23:5.31:95,0,5	0/0:27,0:27:78.08:0,78,957	0/1:27,0:26:21.93:196,0,22	0/1:25,1:26:37.29:80,0,37	0/1:5,0:5:12.91:25,0,13	1/1:7,0:7:15.64:60,16,0	0/0:10,0:10:30.10:0,30,398	0/0:11,0:11:33.09:0,33,421	0/1:28,0:27:12.16:115,0,12	0/1:23,0:23:75.78:76,0,91	1/1:18,1:19:21.37:179,21,0	1/1:9,0:8:22.92:109,23,0
chr10	68408381	.	AT	A	5982.91	PASS	AB=1.000;AC=37;AF=0.661;AN=56;BaseQRankSum=12.891;DP=558;FS=4.506;HRun=9;HaplotypeScore=131.3355;InbreedingCoeff=0.9388;MQ=59.76;MQ0=16;MQRankSum=-13.128;QD=17.09;ReadPosRankSum=3.547;VQSLOD=3.9289;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:77.13:0,77,883	1/1:2,4:6:13.55:109,14,0	0/1:52,0:19:1.03:1,0,163	0/0:50,0:16:19.38:0,19,158	0/0:16,0:16:33.09:0,33,371	1/1:2,17:18:53.98:482,54,0	1/1:4,11:15:42.02:383,42,0	0/0:40,0:40:99:0,105,1182	0/0:14,0:14:42.12:0,42,484	1/1:24,0:23:49.61:338,50,0	1/1:17,0:16:16.55:199,17,0	1/1:1,10:11:32.96:290,33,0	0/0:7,0:7:21.02:0,21,227	1/1:1,9:10:30.02:274,30,0	1/1:7,8:15:32.97:289,33,0	1/1:3,11:14:24.49:289,24,0	1/1:9,14:23:49.81:435,50,0	0/0:27,0:27:75.20:0,75,851	1/1:12,15:26:68.97:613,69,0	1/1:9,17:26:31.61:359,32,0	1/1:2,3:5:9:79,9,0	1/1:0,7:7:18.01:163,18,0	0/0:10,0:10:30.09:0,30,346	0/0:12,0:12:33.09:0,33,371	1/1:9,19:27:62.90:562,63,0	1/1:5,18:23:31.19:440,31,0	1/1:4,15:19:49.56:435,50,0	1/1:1,8:9:27.01:245,27,0
chr10	68408390	.	TA	T	2106.66	PASS	AB=1.000;AC=35;AF=0.625;AN=56;BaseQRankSum=14.898;DP=582;FS=3.717;HRun=1;HaplotypeScore=145.2211;InbreedingCoeff=0.8861;MQ=59.36;MQ0=20;MQRankSum=-13.456;QD=6.91;ReadPosRankSum=4.045;VQSLOD=1.0458;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:76.19:0,76,881	1/1:7,0:6:9.80:38,10,0	0/0:62,1:21:6:0,6,178	0/0:58,0:19:31.41:0,31,187	0/0:10,0:10:29.99:0,30,312	1/1:19,0:18:45.84:189,46,0	1/1:15,0:15:37.57:149,38,0	0/0:40,0:40:99:0,112,1233	0/0:14,0:14:41.99:0,42,455	1/1:21,0:20:10.28:62,10,0	1/1:21,0:18:4.82:68,5,0	1/1:12,0:12:31.44:147,31,0	0/0:8,0:8:20.94:0,21,205	1/1:11,0:11:24.48:95,24,0	1/1:13,1:14:24.40:113,24,0	1/1:16,0:16:33.35:144,33,0	1/1:23,0:23:48.38:176,48,0	0/0:27,0:27:81.13:0,81,891	1/1:31,0:29:15.45:201,15,0	1/1:24,0:23:34.80:140,35,0	0/1:4,0:4:6.23:19,0,6	1/1:9,0:9:18.24:69,18,0	0/0:12,0:12:36.07:0,36,389	0/0:14,0:14:41.97:0,42,429	1/1:25,2:26:56.12:236,56,0	1/1:22,0:20:33.71:151,34,0	1/1:19,1:20:50.22:234,50,0	1/1:9,0:8:21.68:91,22,0
chr10	68408399	.	G	GTTTTGTT	16398.49	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=11.136;DP=578;FS=3.973;HRun=0;HaplotypeScore=148.8914;InbreedingCoeff=0.9839;MQ=53.00;MQ0=24;MQRankSum=-12.566;QD=51.25;ReadPosRankSum=2.845;VQSLOD=5.0127;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:78.15:0,78,1615	1/1:5,2:6:12.04:335,12,0	0/0:56,0:14:15.55:0,16,210	0/0:52,0:16:19.96:0,20,243	0/0:10,0:10:24.08:0,24,473	1/1:5,11:17:47.99:1437,48,0	1/1:8,7:14:36.04:1065,36,0	0/0:38,0:39:99:0,102,2117	0/0:11,0:11:33.09:0,33,737	1/1:16,2:20:41.93:873,42,0	1/1:14,5:20:44.80:1068,45,0	1/1:7,5:13:33.02:895,33,0	0/0:8,0:8:21.07:0,21,445	1/1:8,4:12:27.04:712,27,0	1/1:6,8:19:29.57:732,30,0	1/1:14,3:17:35.97:756,36,0	1/1:10,11:25:44.07:1168,44,0	0/0:25,0:26:75.22:0,75,1667	1/1:23,5:28:69.06:1453,69,0	1/1:21,3:26:47.80:942,48,0	1/1:3,0:4:11.93:281,12,0	1/1:5,5:11:14.94:350,15,0	0/0:13,0:13:29.85:0,30,587	0/0:12,0:12:36.11:0,36,855	1/1:15,5:25:56.62:1353,57,0	1/1:17,5:21:47.96:1047,48,0	1/1:11,7:19:51.13:1344,51,0	1/1:7,2:8:26.83:589,27,0
chr10	68408403	.	T	TG	1664.61	PASS	AB=0.979;AC=25;AF=0.446;AN=56;BaseQRankSum=14.458;DP=563;FS=5.890;HRun=0;HaplotypeScore=130.7498;InbreedingCoeff=0.1153;MQ=50.10;MQ0=24;MQRankSum=-11.199;QD=4.55;ReadPosRankSum=3.127;VQSLOD=2.8084;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:81.15:0,81,1026	1/1:7,0:6:1.51:28,2,0	0/1:54,0:12:0.79:1,0,201	0/0:48,0:14:22.46:0,22,249	0/0:11,0:11:24.07:0,24,321	1/1:18,0:17:42.70:191,43,0	0/1:15,0:14:1.11:102,0,1	0/0:38,0:38:99:0,105,1339	0/0:11,0:11:33.09:0,33,427	0/1:19,0:18:17.83:121,0,18	0/1:20,1:18:60.59:61,0,73	0/1:12,0:12:11.91:61,0,12	0/0:7,0:7:21.07:0,21,292	1/1:12,0:11:0.71:58,1,0	0/1:19,0:19:13.54:60,0,14	0/1:17,0:17:3.53:92,0,4	0/1:23,0:23:0.71:129,0,1	0/0:26,0:26:69.04:0,69,927	0/1:30,2:29:48.82:188,0,49	0/1:26,0:25:41.11:131,0,41	1/1:4,0:4:8.40:42,8,0	1/1:10,0:10:13.92:69,14,0	0/0:12,0:12:30.09:0,30,402	0/0:13,0:13:39.09:0,39,522	0/1:25,2:26:36.64:150,0,37	0/1:22,1:21:10.15:144,0,10	0/1:16,1:17:5.36:109,0,5	1/1:10,0:9:4.39:100,4,0
chr10	68409199	.	GAAA	G	2240.19	PASS	AB=0.777;AC=28;AF=0.500;AN=56;BaseQRankSum=4.469;DP=564;FS=2.793;HRun=18;HaplotypeScore=95.7651;InbreedingCoeff=0.4526;MQ=62.06;MQ0=10;MQRankSum=2.015;QD=7.11;ReadPosRankSum=7.909;VQSLOD=-0.4786;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:41:69.02:0,69,814	0/1:2,6:9:0.88:77,0,1	0/0:25,0:14:8.75:0,9,97	0/1:25,0:12:6.51:7,0,32	0/0:19,0:24:47.79:0,48,448	0/1:13,11:24:3.52:128,0,4	1/1:11,9:20:20.28:193,20,0	0/0:34,0:34:59.46:0,59,625	0/0:16,0:18:48:0,48,505	0/0:23,0:24:39.59:0,40,242	0/0:8,0:15:19.39:0,19,117	1/1:6,6:13:14.53:134,15,0	0/0:13,0:13:21.86:0,22,203	0/1:13,1:14:19.73:88,0,20	1/1:10,8:21:15.21:172,15,0	1/1:12,6:19:27.89:279,28,0	1/1:15,13:33:22.81:366,23,0	1/1:13,4:18:6.66:183,7,0	0/1:10,7:16:4.32:142,0,4	0/1:17,0:19:38.74:39,0,43	1/1:10,1:12:5.88:64,6,0	1/1:14,4:20:17.83:163,18,0	0/0:21,0:28:31.16:0,31,315	0/0:26,0:26:33.56:0,34,498	1/1:10,2:12:7.04:85,7,0	0/1:7,8:17:18.37:167,0,18	0/1:11,2:15:48.95:76,0,49	1/1:4,2:6:8.72:76,9,0
chr10	68410207	.	TTGGTCGG	T	1508.05	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.012;DP=611;FS=54.554;HRun=0;HaplotypeScore=154.3775;InbreedingCoeff=0.9992;MQ=73.65;MQ0=0;MQRankSum=-7.685;QD=65.57;ReadPosRankSum=-0.937;VQSLOD=1.3585;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,135,5027	0/0:13,0:13:39.12:0,39,1389	0/0:23,0:23:66.16:0,66,1994	0/0:12,0:12:33.11:0,33,1048	0/0:26,0:26:75.24:0,75,2894	0/0:22,0:22:60.17:0,60,2192	0/0:30,0:30:87.28:0,87,3367	0/0:20,0:20:48.15:0,48,1719	0/0:24,0:24:72.25:0,72,2805	1/1:1,12:13:36.12:935,36,0	1/1:1,9:10:27.09:695,27,0	0/0:19,0:19:54.14:0,54,1866	0/0:22,0:22:66.23:0,66,2586	0/0:18,0:18:51.18:0,51,2036	0/0:24,0:24:69.24:0,69,2699	0/0:25,0:25:75.24:0,75,2812	0/0:29,0:29:81.28:0,81,3208	0/0:20,0:20:54.17:0,54,2062	0/0:18,0:18:45.15:0,45,1745	0/0:25,0:25:72.22:0,72,2604	0/0:24,0:24:63.22:0,63,2497	0/0:23,0:23:63.20:0,63,2400	0/0:27,0:27:78.27:0,78,2942	0/0:27,0:27:78.27:0,78,2952	0/0:17,0:17:48.15:0,48,1756	0/0:16,0:16:48.16:0,48,1910	0/0:22,0:22:66.21:0,66,2470	0/0:14,0:14:42.14:0,42,1640
chr10	68411159	.	TGA	T	538.60	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=3.335;DP=615;FS=16.176;HRun=0;HaplotypeScore=125.8263;InbreedingCoeff=0.9694;MQ=84.31;MQ0=0;MQRankSum=-4.612;QD=19.95;ReadPosRankSum=1.976;VQSLOD=3.0647;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:63.22:0,63,1108	0/0:13,0:13:39.13:0,39,515	0/0:33,0:32:85.17:0,85,1465	0/0:27,0:27:71.45:0,71,1205	0/0:20,0:20:48.16:0,48,849	0/0:23,0:23:69.09:0,69,892	0/0:25,0:25:63.20:0,63,812	0/0:25,0:25:65.87:0,66,816	0/0:24,0:24:57.02:0,57,717	1/1:3,9:12:24.08:329,24,0	1/1:5,10:15:24.08:330,24,0	0/0:19,0:19:54.17:0,54,705	0/0:22,0:22:60.19:0,60,1036	0/0:18,0:18:45.14:0,45,573	0/0:32,0:32:96.14:0,96,1219	0/0:24,0:24:69.22:0,69,890	0/0:41,0:41:99:0,120,1507	0/0:26,0:26:78.03:0,78,956	0/0:25,0:24:69.22:0,69,880	0/0:12,0:12:33.09:0,33,413	0/0:32,0:32:93.30:0,93,1234	0/0:13,0:13:33.11:0,33,455	0/0:11,0:11:30.10:0,30,532	0/0:25,0:25:69.24:0,69,1224	0/0:21,0:21:51.17:0,51,677	0/0:19,1:20:9.99:0,10,576	0/0:23,0:23:57.19:0,57,770	0/0:8,0:8:18.06:0,18,244
chr10	68411737	.	A	AAAAG	3027.33	PASS	AB=1.000;AC=41;AF=0.788;AN=52;BaseQRankSum=5.600;DP=545;FS=3.938;HRun=0;HaplotypeScore=145.8276;InbreedingCoeff=0.7772;MQ=36.29;MQ0=39;MQRankSum=-5.482;QD=7.12;ReadPosRankSum=0.181;VQSLOD=2.7841;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:21,16:32:13.29:273,13,0	1/1:8,0:7:11.94:95,12,0	./.	./.	1/1:8,11:16:30.03:541,30,0	1/1:19,0:18:25.52:178,26,0	1/1:13,0:13:5.94:43,6,0	1/1:24,0:23:1.25:3,1,0	0/0:27,0:25:6:0,6,56	1/1:25,0:23:29.75:391,30,0	1/1:21,0:18:17.54:254,18,0	1/1:17,0:14:11.84:60,12,0	0/0:12,0:12:9.03:0,9,135	1/1:12,0:12:17.74:125,18,0	1/1:25,0:25:21.91:148,22,0	1/1:14,0:13:16.16:100,16,0	1/1:23,0:21:14.31:84,14,0	0/0:28,0:26:8.70:0,9,330	0/1:17,0:14:0.01:0,0,0	1/1:13,0:14:17.65:111,18,0	1/1:7,0:6:2.22:7,2,0	1/1:13,0:13:20.63:132,21,0	0/0:25,0:23:26.99:0,27,284	0/0:18,0:16:15.02:0,15,202	1/1:36,0:32:39.61:226,40,0	1/1:28,0:23:7.65:44,8,0	1/1:20,0:19:23.70:135,24,0	1/1:32,0:25:35.49:236,35,0
chr10	68411739	.	AAG	A	924.38	PASS	AB=0.841;AC=17;AF=0.327;AN=52;BaseQRankSum=1.570;DP=558;FS=41.233;HRun=0;HaplotypeScore=116.1633;InbreedingCoeff=-0.4786;MQ=36.84;MQ0=37;MQRankSum=-6.434;QD=2.77;ReadPosRankSum=0.271;VQSLOD=0.8284;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:31:32.82:0,33,301	0/1:8,2:9:16.74:17,0,98	./.	./.	0/0:19,0:16:35.85:0,36,391	0/1:15,4:18:36.14:36,0,291	0/1:13,0:13:55.67:66,0,56	0/0:30,0:29:77.08:0,77,622	0/0:28,0:26:33.87:0,34,338	0/1:24,0:22:53.43:53,0,145	0/1:21,1:19:37.91:38,0,129	0/1:18,0:15:14.98:15,0,216	0/0:12,0:12:30:0,30,340	0/1:11,1:12:20.10:20,0,196	0/1:15,11:26:95.81:96,0,277	0/1:11,4:14:14.99:15,0,206	0/1:16,6:20:28.25:28,0,172	0/0:30,0:28:52.48:0,52,683	0/1:13,6:17:65.32:214,0,65	0/0:10,4:14:18.01:0,18,213	0/1:5,2:6:9.89:10,0,52	0/1:9,4:13:48.01:48,0,238	0/0:25,0:23:38.91:0,39,425	0/0:19,0:17:32.31:0,32,402	0/1:26,11:33:94.98:95,0,548	0/1:19,8:22:99:179,0,324	0/1:12,7:18:95.94:96,0,322	0/1:28,3:25:52:52,0,448
chr10	68411785	.	GA	G	107.15	PASS	AB=0.844;AC=10;AF=0.179;AN=56;BaseQRankSum=2.212;DP=569;FS=3.855;HRun=4;HaplotypeScore=108.1231;InbreedingCoeff=-0.0138;MQ=54.85;MQ0=11;MQRankSum=-5.327;QD=0.61;ReadPosRankSum=0.111;VQSLOD=-0.4034;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:38:69.06:0,69,816	0/1:8,3:11:41.19:41,0,300	0/0:15,0:8:23.90:0,24,281	0/0:9,0:6:3.84:0,4,83	0/0:24,0:23:26.76:0,27,657	0/0:18,1:19:50.68:0,51,700	0/0:19,0:18:47.19:0,47,618	0/0:42,0:40:92.31:0,92,1206	1/1:15,0:15:5.68:27,6,0	0/0:19,1:19:54.17:0,54,729	0/1:15,4:18:23.78:24,0,484	0/1:13,5:15:65.52:66,0,411	0/0:11,0:11:33.11:0,33,453	0/1:10,3:13:2.04:2,0,361	0/1:20,3:23:12.19:12,0,624	0/0:14,2:15:6.20:0,6,485	0/0:24,3:25:30.36:0,30,845	0/0:26,1:26:69.06:0,69,897	0/0:18,0:17:50.20:0,50,661	0/0:15,1:16:45.15:0,45,619	0/0:16,0:16:42.14:0,42,571	0/0:15,0:15:45.15:0,45,620	0/0:18,0:17:48.14:0,48,647	0/0:11,0:11:27.09:0,27,374	0/1:27,5:31:26.54:27,0,908	0/1:18,3:18:37.83:38,0,490	0/1:21,2:22:8.49:8,0,700	0/0:31,0:30:87.25:0,87,1174
chr10	68413434	.	TGG	T	924.78	PASS	AC=4;AF=0.077;AN=52;BaseQRankSum=7.613;DP=572;FS=9.117;HRun=3;HaplotypeScore=84.1754;InbreedingCoeff=0.9931;MQ=45.64;MQ0=41;MQRankSum=-6.215;QD=26.42;ReadPosRankSum=0.519;VQSLOD=1.6812;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:34:69.21:0,69,1279	0/0:11,0:11:33.11:0,33,637	./.	./.	0/0:29,0:25:57.20:0,57,1099	0/0:24,0:22:54.14:0,54,1004	0/0:22,0:17:36.12:0,36,694	0/0:31,0:27:78.27:0,78,1483	0/0:23,0:22:54.19:0,54,1043	1/1:1,20:18:51.17:778,51,0	1/1:1,13:12:18.06:265,18,0	0/0:18,0:17:36.12:0,36,695	0/0:21,0:19:42.14:0,42,811	0/0:10,0:10:24.08:0,24,462	0/0:19,0:19:38.80:0,39,753	0/0:22,0:19:48.16:0,48,917	0/0:32,0:25:42.10:0,42,771	0/0:25,0:22:51.14:0,51,939	0/0:10,0:10:27.09:0,27,521	0/0:20,0:20:57.20:0,57,1100	0/0:29,0:26:57.20:0,57,1100	0/0:18,0:17:27.09:0,27,521	0/0:28,0:27:69.15:0,69,1244	0/0:23,0:21:39.12:0,39,720	0/0:16,0:16:45.15:0,45,867	0/0:27,0:22:66.23:0,66,1274	0/0:31,0:28:63.21:0,63,1215	0/0:13,0:11:30.10:0,30,580
chr10	68413694	.	GGTTT	G	2023.51	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=9.247;DP=626;FS=12.362;HRun=0;HaplotypeScore=100.3347;InbreedingCoeff=0.7232;MQ=65.74;MQ0=10;MQRankSum=-2.378;QD=25.94;ReadPosRankSum=0.052;VQSLOD=2.6376;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:25:63.98:0,64,1001	0/0:10,0:10:20.68:0,21,197	0/0:56,0:11:22.20:0,22,225	0/0:34,0:13:2.02:0,2,70	0/0:27,0:26:63.02:0,63,1090	0/0:22,0:22:15.85:0,16,677	0/0:18,0:19:37.85:0,38,422	0/0:33,0:31:30.38:0,30,704	0/1:18,0:16:49.75:50,0,218	1/1:1,30:29:84.02:1168,84,0	1/1:0,19:19:44.73:685,45,0	0/0:18,0:18:22.52:0,23,255	0/0:14,0:14:32.96:0,33,572	0/0:18,0:18:32.76:0,33,421	0/0:31,0:30:77.76:0,78,963	0/0:20,0:20:59.62:0,60,839	0/0:25,0:23:53.81:0,54,585	1/1:7,0:10:29.91:268,30,0	0/0:24,0:24:2.39:0,2,451	0/0:26,0:26:69.08:0,69,879	0/0:15,0:15:28.23:0,28,288	0/0:14,0:13:33.03:0,33,471	0/0:16,0:16:45.10:0,45,800	0/0:24,0:24:63.02:0,63,1068	0/0:11,0:11:11.84:0,12,159	0/0:23,0:23:35.34:0,35,605	0/0:30,0:28:45.65:0,46,645	0/0:10,0:10:20.76:0,21,186
chr10	68414191	.	A	ATG	3951.11	PASS	AB=0.975;AC=28;AF=0.500;AN=56;BaseQRankSum=6.622;DP=692;FS=0.455;HRun=0;HaplotypeScore=140.4132;InbreedingCoeff=0.4406;MQ=59.58;MQ0=9;MQRankSum=0.720;QD=9.36;ReadPosRankSum=2.433;VQSLOD=3.5340;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:60.18:0,60,725	1/1:4,0:4:2.72:12,3,0	0/0:35,0:17:33.09:0,33,381	0/0:34,0:18:26.84:0,27,306	0/0:25,0:25:60.16:0,60,721	0/1:19,5:24:7.47:368,0,7	1/1:6,8:14:3.01:49,3,0	0/0:39,0:37:75.21:0,75,892	1/1:7,17:24:24.55:389,25,0	0/1:35,1:36:0.20:182,0,0	0/1:19,0:18:15.93:54,0,16	1/1:5,11:16:9.03:147,9,0	0/0:25,0:25:54.13:0,54,635	0/1:15,0:15:25.42:25,0,27	0/1:23,0:23:0:0,0,0	1/1:22,0:22:5.60:63,6,0	1/1:24,14:34:51.05:741,51,0	0/0:6,8:10:2.41:0,2,17	1/1:12,13:24:36.63:580,37,0	0/1:18,0:18:0:0,0,0	1/1:12,22:30:15.05:244,15,0	0/0:3,18:20:3.01:0,3,32	0/0:22,0:22:51.02:0,51,603	0/0:20,0:20:42.13:0,42,516	1/1:5,15:19:8.98:147,9,0	1/1:33,0:31:55.33:868,55,0	0/1:28,0:28:23.82:57,0,24	0/1:28,0:27:25.06:25,0,29
chr10	68414203	.	G	GTGTGTCTGTC	10224.57	PASS	AB=0.760;AC=32;AF=0.593;AN=54;BaseQRankSum=-6.316;DP=699;FS=2.435;HRun=0;HaplotypeScore=187.5171;InbreedingCoeff=0.6193;MQ=56.55;MQ0=19;MQRankSum=-0.741;QD=24.23;ReadPosRankSum=0.879;VQSLOD=4.3226;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:63.21:0,63,1556	1/1:0,4:6:3.48:77,3,0	0/0:35,0:15:36.09:0,36,527	0/0:33,0:13:26.15:0,26,579	0/0:24,0:24:60.20:0,60,1631	1/1:22,0:22:2.15:825,2,0	1/1:14,0:14:3.01:101,3,0	0/0:37,0:34:96.20:0,96,1802	1/1:30,0:30:41.69:1108,42,0	0/1:42,0:42:99:345,0,189	0/0:17,0:16:15.12:0,15,121	1/1:14,0:14:9.03:298,9,0	0/0:25,0:25:54.17:0,54,1345	1/1:2,14:19:5.38:166,5,0	./.	1/1:0,23:26:5.70:315,6,0	1/1:35,0:31:59.91:1522,60,0	0/1:12,0:8:6.97:53,0,7	1/1:21,0:21:57.19:1293,57,0	0/1:0,15:17:0:0,0,0	1/1:34,0:29:27.08:743,27,0	1/1:22,0:20:8.70:110,9,0	0/0:26,0:24:50.57:0,51,1222	0/0:20,0:20:42.14:0,42,1185	1/1:21,0:20:14.96:334,15,0	1/1:5,26:32:54.07:2538,54,0	1/1:2,26:32:8.01:246,8,0	0/1:3,9:19:29.14:152,0,29
chr10	68414213	.	GTCTA	G	1071.90	PASS	AB=1.000;AC=12;AF=0.222;AN=54;BaseQRankSum=-2.495;DP=648;FS=9.000;HRun=0;HaplotypeScore=166.5363;InbreedingCoeff=0.6887;MQ=54.35;MQ0=19;MQRankSum=4.534;QD=6.09;ReadPosRankSum=4.351;VQSLOD=1.6188;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:12,17:30:21.07:326,21,0	0/0:6,0:6:2.88:0,3,59	./.	0/1:26,0:8:0:0,0,0	1/1:13,12:25:18.06:280,18,0	0/0:20,0:20:17.69:0,18,275	0/0:13,0:13:8.06:0,8,106	0/0:45,0:41:47.51:0,48,337	0/0:31,0:31:42.97:0,43,560	0/0:37,0:37:57.74:0,58,649	0/0:21,0:20:5.94:0,6,43	0/0:16,0:16:14.72:0,15,204	1/1:11,11:22:12.04:186,12,0	0/0:18,0:18:9.03:0,9,148	0/0:24,0:24:3:0,3,25	0/0:27,0:27:15.02:0,15,226	0/0:29,0:25:15.02:0,15,194	0/0:12,0:8:9.02:0,9,129	0/0:18,0:16:13.43:0,13,164	0/0:18,0:18:11.84:0,12,145	0/0:28,0:23:20.99:0,21,332	0/0:19,0:17:8.84:0,9,123	1/1:11,12:21:23.75:342,24,0	1/1:13,6:19:6.02:93,6,0	0/0:20,0:19:15:0,15,217	0/0:35,0:33:47.88:0,48,589	0/1:31,0:31:5.18:5,0,145	0/0:9,0:9:8.98:0,9,111
chr10	68414498	.	C	CAG	867.86	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=4.163;DP=373;FS=0.958;HRun=0;HaplotypeScore=50.7756;InbreedingCoeff=0.9348;MQ=69.71;MQ0=0;MQRankSum=0.120;QD=36.16;ReadPosRankSum=-2.129;VQSLOD=4.8655;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:66.22:0,66,923	0/0:3,0:3:9.03:0,9,126	0/0:10,0:8:24.06:0,24,317	0/0:26,0:19:39.12:0,39,524	0/0:18,0:18:54.17:0,54,738	0/0:14,0:13:30.10:0,30,420	0/0:14,0:14:39.13:0,39,546	0/0:23,0:23:60.18:0,60,810	0/0:11,0:11:30.10:0,30,420	1/1:5,8:13:33.11:569,33,0	1/1:1,10:11:24.08:420,24,0	0/0:6,0:6:15.05:0,15,210	0/0:5,0:5:15.05:0,15,210	0/0:9,0:9:27.08:0,27,361	0/0:14,0:14:42.14:0,42,587	0/0:10,0:10:30.10:0,30,420	0/0:18,0:18:45.14:0,45,613	0/0:16,0:16:36.12:0,36,503	0/0:15,0:14:36.12:0,36,504	0/0:11,0:10:30.10:0,30,420	0/0:13,0:13:36.12:0,36,504	0/0:9,0:9:27.09:0,27,378	0/0:8,0:8:21.07:0,21,294	0/0:19,0:17:42.10:0,42,560	0/0:16,0:16:48.15:0,48,656	0/0:14,0:14:36.12:0,36,504	0/0:16,0:16:45.15:0,45,630	0/0:5,0:5:12.04:0,12,168
chr10	68414597	.	T	TAAC	2249.64	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=-6.933;DP=520;FS=1.236;HRun=0;HaplotypeScore=74.4068;InbreedingCoeff=0.8104;MQ=60.25;MQ0=0;MQRankSum=-0.838;QD=26.16;ReadPosRankSum=-0.461;VQSLOD=3.1371;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:57.16:0,57,803	0/0:5,0:5:12.04:0,12,174	0/1:26,0:22:3.29:3,0,253	0/0:18,0:17:23.05:0,23,366	0/0:17,0:17:48.15:0,48,676	0/0:21,0:21:45.15:0,45,648	0/0:12,0:12:30.10:0,30,433	0/0:33,0:33:63.19:0,63,866	0/0:16,0:16:32.96:0,33,440	1/1:8,25:35:78.24:1480,78,0	1/1:7,16:24:45.15:890,45,0	0/0:20,0:20:42.14:0,42,606	0/0:12,0:12:33.11:0,33,475	0/0:11,0:11:33.09:0,33,443	0/0:15,0:15:36.12:0,36,518	0/0:14,0:13:36.09:0,36,454	0/0:23,0:22:40.08:0,40,686	0/0:24,0:24:51.11:0,51,677	0/0:30,0:30:54.09:0,54,679	0/0:19,0:19:48.15:0,48,676	0/0:21,0:21:54.14:0,54,722	0/0:4,0:4:12.04:0,12,174	0/0:19,0:19:39.07:0,39,504	0/0:15,0:15:33.06:0,33,435	0/0:18,0:18:36.07:0,36,464	0/0:22,0:22:60.19:0,60,852	0/0:17,0:17:39.13:0,39,563	0/0:5,0:5:15.05:0,15,217
chr10	68415226	.	C	CTT	1952.93	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-7.622;DP=576;FS=3.506;HRun=8;HaplotypeScore=68.9016;InbreedingCoeff=0.9768;MQ=64.28;MQ0=0;MQRankSum=2.166;QD=36.85;ReadPosRankSum=0.272;VQSLOD=3.5558;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:81.18:0,81,889	0/0:13,0:13:33.08:0,33,368	0/0:8,0:5:14.06:0,14,133	0/0:11,0:10:18.59:0,19,175	0/0:27,0:27:75.18:0,75,825	0/0:22,0:22:57.13:0,57,625	0/0:14,0:14:36.08:0,36,392	0/0:36,0:36:90.17:0,90,975	0/0:20,0:20:51.13:0,51,568	1/1:2,16:18:48.13:714,48,0	1/1:4,30:35:89.75:1360,90,0	0/0:24,0:24:59.96:0,60,648	0/0:19,0:19:48.13:0,48,535	0/0:6,0:6:15.04:0,15,167	0/0:18,0:18:51.12:0,51,559	0/0:18,0:18:48.13:0,48,535	0/0:23,0:23:48.10:0,48,521	0/0:17,0:17:36.09:0,36,399	0/0:29,0:27:51.07:0,51,557	0/0:25,0:25:63.16:0,63,702	0/0:9,0:9:24.06:0,24,268	0/0:17,0:17:42.10:0,42,468	0/0:19,0:19:54.15:0,54,602	0/0:10,0:10:30.08:0,30,334	0/0:26,0:26:75.19:0,75,828	0/0:30,0:30:84.21:0,84,936	0/0:35,0:34:99:0,102,1135	0/0:15,0:15:42.11:0,42,468
chr10	68415737	.	G	GA	1690.65	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-8.746;DP=589;FS=3.301;HRun=7;HaplotypeScore=54.6477;InbreedingCoeff=0.9785;MQ=77.39;MQ0=0;MQRankSum=-1.744;QD=31.31;ReadPosRankSum=0.444;VQSLOD=3.7914;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:66.08:0,66,630	0/0:9,0:9:27.04:0,27,260	0/0:15,0:15:30.01:0,30,280	0/0:11,0:11:19.16:0,19,225	0/0:28,0:28:81.12:0,81,777	0/0:26,0:26:63.07:0,63,603	0/0:23,0:23:63.08:0,63,602	0/0:37,0:37:90.11:0,90,859	0/0:15,0:15:42.06:0,42,406	1/1:3,28:31:84.26:1015,84,0	1/1:0,23:23:66.20:797,66,0	0/0:13,0:13:39.05:0,39,371	0/0:17,0:17:42.07:0,42,405	0/0:12,0:12:30.05:0,30,290	0/0:31,0:31:75.09:0,75,718	0/0:19,0:19:51.06:0,51,486	0/0:24,0:24:72.06:0,72,680	0/0:17,0:17:48.08:0,48,464	0/0:20,0:20:60.06:0,60,566	0/0:41,0:41:99:0,114,1101	0/0:6,0:6:12.02:0,12,116	0/0:31,0:32:92.18:0,92,875	0/0:21,0:21:54.08:0,54,518	0/0:10,0:10:27.04:0,27,261	0/0:20,0:20:60.10:0,60,579	0/0:28,1:29:35.87:0,36,630	0/0:25,0:25:63.10:0,63,608	0/0:8,0:8:24.04:0,24,232
chr10	68418378	.	C	CTTT	4253.80	PASS	AB=0.711;AC=41;AF=0.732;AN=56;BaseQRankSum=4.652;DP=447;FS=4.777;HRun=13;HaplotypeScore=70.0610;InbreedingCoeff=0.7568;MQ=63.19;MQ0=1;MQRankSum=0.126;QD=11.95;ReadPosRankSum=-1.751;VQSLOD=1.9632;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:47.92:0,48,516	1/1:0,1:9:13.24:142,13,0	0/0:9,0:5:2.85:0,3,32	0/0:3,0:2:0.89:0,1,2	0/0:13,0:13:4.55:0,5,207	1/1:5,1:19:23.93:213,24,0	1/1:2,0:15:26.90:205,27,0	0/1:16,0:27:4.81:93,0,5	1/1:5,0:15:10.46:40,10,0	1/1:4,8:19:43.58:549,44,0	1/1:3,2:10:23.92:267,24,0	1/1:5,0:12:7.22:49,7,0	0/0:10,0:12:22.35:0,22,241	1/1:2,0:13:18.68:123,19,0	1/1:4,1:18:26.92:238,27,0	1/1:4,0:9:10.18:67,10,0	1/1:6,2:23:26.94:267,27,0	1/1:7,15:24:10.56:134,11,0	1/1:10,3:30:58.10:550,58,0	1/1:8,1:20:35.62:279,36,0	1/1:4,0:12:9.82:67,10,0	1/1:2,1:11:26.83:212,27,0	0/0:14,0:14:20.67:0,21,217	0/0:16,0:16:32.81:0,33,343	1/1:1,1:9:10.19:68,10,0	1/1:7,1:22:40.14:348,40,0	1/1:7,0:29:38.84:295,39,0	1/1:3,0:9:5.98:46,6,0
chr10	68419004	.	GCGCACACA	G	2764.17	PASS	AB=1.000;AC=31;AF=0.596;AN=52;BaseQRankSum=-2.668;DP=392;FS=14.043;HRun=0;HaplotypeScore=77.5899;InbreedingCoeff=0.5696;MQ=61.85;MQ0=18;MQRankSum=0.130;QD=14.32;ReadPosRankSum=0.435;VQSLOD=1.0637;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:77.54:0,78,979	1/1:1,0:1:3:25,3,0	0/0:28,0:15:30.31:0,30,285	0/0:41,0:20:53.69:0,54,485	0/0:13,0:13:29.95:0,30,668	1/1:2,12:12:3.01:86,3,0	1/1:16,0:16:38.89:314,39,0	1/1:17,0:15:42.33:365,42,0	0/0:5,0:4:2.04:0,2,6	0/1:11,0:11:82.82:83,0,397	0/1:9,0:8:74.10:107,0,74	1/1:0,13:13:6.02:123,6,0	0/0:7,0:7:14.53:0,15,168	./.	1/1:0,11:11:9.03:241,9,0	1/1:6,0:8:17.97:229,18,0	1/1:16,1:16:35.88:346,36,0	1/1:7,0:7:7.86:66,8,0	0/1:6,0:5:39.24:39,0,71	1/1:7,0:7:17.98:149,18,0	1/1:24,0:22:45.25:351,45,0	./.	0/0:13,0:13:32.01:0,32,654	0/0:24,0:23:53.71:0,54,1052	1/1:0,16:17:6.02:133,6,0	1/1:13,0:12:24.10:204,24,0	0/0:0,14:14:0:0,0,0	1/1:0,1:1:3.01:86,3,0
chr10	68419264	.	T	TA	234.42	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-0.833;DP=362;FS=13.689;HRun=9;HaplotypeScore=34.1403;InbreedingCoeff=0.6852;MQ=55.32;MQ0=6;MQRankSum=0.147;QD=14.65;ReadPosRankSum=0.246;VQSLOD=1.7149;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,1:29:35.82:0,36,536	0/0:3,0:2:6:0,6,52	0/0:5,0:5:3.81:0,4,69	0/0:3,0:2:6:0,6,52	0/0:20,0:20:44.95:0,45,382	0/0:22,0:22:50.99:0,51,442	0/0:5,0:5:9:0,9,78	0/0:42,0:39:98.89:0,99,847	0/0:7,0:5:15:0,15,130	1/1:1,8:9:21.06:232,21,0	1/1:1,6:7:11.95:116,12,0	0/0:16,0:14:41.99:0,42,364	0/0:6,0:6:15:0,15,130	0/0:5,0:4:9:0,9,78	0/0:17,0:13:32.92:0,33,278	0/0:10,0:10:21:0,21,182	0/0:27,0:27:50.98:0,51,443	0/0:29,0:28:53.96:0,54,464	0/0:22,0:20:50.98:0,51,442	0/0:5,0:5:12:0,12,104	0/0:14,0:13:35.96:0,36,305	0/0:1,0:1:3:0,3,26	0/0:9,0:9:17.97:0,18,152	0/0:5,0:5:15:0,15,130	0/0:8,0:8:15:0,15,130	0/0:11,0:10:26.99:0,27,234	0/0:12,0:12:32.94:0,33,278	0/0:11,0:10:20.91:0,21,169
chr10	68419422	.	T	TTTTTATTTTA	4325.56	PASS	AB=1.000;AC=34;AF=0.680;AN=50;BaseQRankSum=2.900;DP=357;FS=0.738;HRun=0;HaplotypeScore=112.2486;InbreedingCoeff=0.5250;MQ=74.59;MQ0=2;MQRankSum=-5.944;QD=20.80;ReadPosRankSum=-0.410;VQSLOD=3.9510;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:51.15:0,51,1395	1/1:3,0:3:5.99:99,6,0	0/0:20,0:13:3.01:0,3,89	0/1:26,0:15:39.78:40,0,87	0/0:25,0:25:39.12:0,39,1025	1/1:8,0:18:3.01:131,3,0	./.	0/0:32,0:32:33.08:0,33,712	1/1:5,0:5:6.02:260,6,0	1/1:6,2:13:15.52:578,16,0	1/1:8,2:12:3.01:149,3,0	1/1:8,0:8:6.01:158,6,0	0/0:12,0:12:15.05:0,15,372	1/1:5,0:5:9.03:194,9,0	./.	1/1:3,0:7:6.02:261,6,0	1/1:22,0:22:33.11:1007,33,0	1/1:17,0:17:10.32:365,10,0	0/1:19,0:19:19.89:242,0,20	1/1:8,0:8:6:78,6,0	1/1:8,0:8:9.01:115,9,0	./.	0/0:5,0:5:6.02:0,6,141	0/0:10,0:10:12.04:0,12,358	1/1:4,0:10:3.01:131,3,0	1/1:11,0:11:9.03:264,9,0	1/1:8,0:8:9.03:228,9,0	1/1:8,0:7:3:27,3,0
chr10	68419999	.	T	TA	3847.87	PASS	AB=0.700;AC=33;AF=0.589;AN=56;BaseQRankSum=-6.443;DP=454;FS=1.919;HRun=12;HaplotypeScore=54.9958;InbreedingCoeff=0.4520;MQ=78.92;MQ0=4;MQRankSum=0.704;QD=14.15;ReadPosRankSum=0.837;VQSLOD=4.1731;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:87.42:0,87,674	1/1:0,7:7:15.02:145,15,0	0/0:30,0:16:7.38:0,7,74	0/1:21,0:14:1.59:2,0,28	0/0:22,2:25:2.79:0,3,313	1/1:3,10:15:35.73:319,36,0	1/1:5,10:17:18.25:286,18,0	0/0:30,0:32:50.67:0,51,491	0/0:0,0:11:16.30:0,16,47	0/1:4,4:14:1.68:187,0,2	1/1:3,9:12:4.74:180,5,0	1/1:0,7:8:21.01:196,21,0	0/1:7,1:8:16.20:16,0,55	1/1:3,6:10:17.86:159,18,0	0/1:7,13:20:13.74:202,0,14	0/1:3,7:10:10.02:75,0,10	1/1:3,18:21:29.66:417,30,0	0/0:14,0:14:29.80:0,30,216	1/1:2,9:13:13.82:244,14,0	0/1:7,14:22:13.28:245,0,13	1/1:2,7:9:15.02:141,15,0	0/1:3,4:7:6.93:92,0,7	0/0:14,1:17:36.83:0,37,246	0/0:17,0:17:41.11:0,41,292	1/1:2,9:11:2.14:181,2,0	1/1:5,18:23:53.81:478,54,0	1/1:8,11:20:7.86:225,8,0	1/1:2,2:4:6.01:58,6,0
chr10	68420397	.	C	CT	4308.84	PASS	AB=0.604;AC=27;AF=0.482;AN=56;BaseQRankSum=-6.988;DP=586;FS=6.115;HRun=12;HaplotypeScore=59.8067;InbreedingCoeff=0.5582;MQ=60.55;MQ0=8;MQRankSum=0.887;QD=13.85;ReadPosRankSum=0.495;VQSLOD=5.1568;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,1:33:50.36:0,50,523	1/1:3,2:5:11.30:80,11,0	0/0:28,0:12:7.92:0,8,44	0/0:28,0:8:7.82:0,8,36	0/0:23,3:27:14.47:0,14,259	1/1:6,15:21:1.25:336,1,0	0/1:8,10:18:29.61:219,0,30	0/0:23,0:25:51.73:0,52,361	0/0:12,0:13:31.10:0,31,210	0/0:18,0:18:35.75:0,36,263	0/0:23,0:29:58.78:0,59,396	1/1:4,8:12:17.13:175,17,0	0/0:14,0:14:38.78:0,39,284	1/1:8,17:25:28.96:420,29,0	0/1:6,12:19:20.82:291,0,21	0/1:12,18:31:37.35:353,0,37	1/1:10,18:28:26:401,26,0	0/0:24,0:25:8.85:0,9,334	1/1:13,12:24:35.79:328,36,0	1/1:5,12:18:5.98:198,6,0	1/1:6,15:24:22.67:342,23,0	0/1:5,12:19:27.05:214,0,27	0/0:10,0:10:17.88:0,18,131	0/0:20,0:19:41.59:0,42,306	1/1:0,6:6:15.02:146,15,0	1/1:9,12:22:35.88:329,36,0	0/1:6,16:22:4.85:267,0,5	1/1:5,9:13:5.40:212,5,0
chr10	68420635	.	CT	C	7024.65	PASS	AB=0.567;AC=41;AF=0.732;AN=56;BaseQRankSum=9.298;DP=494;FS=7.884;HRun=9;HaplotypeScore=49.5650;InbreedingCoeff=0.8476;MQ=66.33;MQ0=8;MQRankSum=1.112;QD=19.25;ReadPosRankSum=1.218;VQSLOD=5.0483;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,108,1233	1/1:0,7:7:9:82,9,0	0/0:15,0:7:2.55:0,3,97	0/0:8,0:7:12.88:0,13,140	0/0:22,0:22:48.13:0,48,541	1/1:2,15:17:39.02:357,39,0	1/1:2,11:12:27.01:247,27,0	1/1:5,26:31:75.03:686,75,0	1/1:1,11:12:30.01:275,30,0	1/1:1,12:13:33:301,33,0	1/1:3,21:23:60.03:548,60,0	1/1:4,13:17:35.05:308,35,0	0/0:9,0:9:27.08:0,27,311	1/1:2,7:9:9:82,9,0	1/1:2,15:16:27.01:247,27,0	1/1:1,20:21:35.67:329,36,0	1/1:5,29:34:36.93:642,37,0	1/1:1,14:15:36.02:329,36,0	1/1:4,13:16:38.97:349,39,0	1/1:1,28:29:69.03:628,69,0	0/1:4,13:17:28.28:214,0,28	1/1:0,6:6:18.01:164,18,0	0/0:16,0:16:42.11:0,42,475	0/0:21,0:19:48.14:0,48,551	1/1:0,16:16:27.01:247,27,0	1/1:3,17:20:51.02:467,51,0	1/1:3,18:20:36.02:330,36,0	1/1:2,7:9:21.01:192,21,0
chr10	68420959	.	TA	T	8730.99	PASS	AB=0.919;AC=44;AF=0.786;AN=56;BaseQRankSum=8.390;DP=567;FS=3.208;HRun=11;HaplotypeScore=61.8899;InbreedingCoeff=0.7837;MQ=68.84;MQ0=0;MQRankSum=1.428;QD=18.74;ReadPosRankSum=2.464;VQSLOD=6.1192;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,1:32:59.47:0,59,771	1/1:1,6:8:20.02:154,20,0	0/1:7,1:8:31.38:31,0,92	0/1:18,1:18:5.91:6,0,90	0/0:23,3:27:9.74:0,10,538	1/1:6,25:32:73.88:590,74,0	1/1:2,16:18:41.95:345,42,0	1/1:5,17:23:52.96:425,53,0	1/1:3,20:24:29.97:442,30,0	1/1:3,23:26:68.90:564,69,0	1/1:2,26:28:68.85:562,69,0	1/1:6,17:24:49.09:398,49,0	0/0:11,1:12:8.43:0,8,288	1/1:4,11:15:29.96:246,30,0	1/1:3,36:39:86.88:714,87,0	1/1:1,20:21:56.93:468,57,0	1/1:1,25:26:51.58:568,52,0	1/1:2,9:11:26.97:222,27,0	1/1:0,11:11:32.96:271,33,0	1/1:5,29:34:82.98:682,83,0	1/1:1,18:19:47.90:394,48,0	1/1:1,10:11:26.96:222,27,0	0/0:14,0:14:24.06:0,24,256	0/0:16,0:16:42.02:0,42,417	1/1:1,16:17:44.95:370,45,0	1/1:3,23:26:68.92:567,69,0	1/1:3,10:13:29.95:246,30,0	1/1:2,11:13:29.95:246,30,0
chr10	68421418	.	T	TGAAG	3858.90	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-5.389;DP=773;FS=1.134;HRun=0;HaplotypeScore=126.3786;InbreedingCoeff=0.9989;MQ=83.52;MQ0=0;MQRankSum=-4.024;QD=71.46;ReadPosRankSum=-1.186;VQSLOD=5.1939;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,129,2706	0/0:9,0:9:27.09:0,27,566	0/0:25,0:25:75.24:0,75,1468	0/0:28,0:28:71.50:0,72,1386	0/0:28,0:28:84.27:0,84,1717	0/0:16,0:16:48.15:0,48,955	0/0:32,0:32:93.30:0,93,1871	0/0:33,0:33:93.28:0,93,1865	0/0:30,0:30:87.30:0,87,1824	1/1:3,22:30:81.26:2210,81,0	1/1:3,20:24:65.97:1649,66,0	0/0:28,0:28:84.27:0,84,1712	0/0:22,0:22:66.20:0,66,1306	0/0:24,0:24:69.22:0,69,1396	0/0:33,0:33:96.32:0,96,1963	0/0:30,0:30:90.30:0,90,1832	0/0:33,0:33:90.31:0,90,1888	0/0:21,0:21:60.14:0,60,1138	0/0:20,0:20:60.19:0,60,1167	0/0:35,0:35:99:0,102,2095	0/0:42,0:42:99:0,120,2366	0/0:26,0:26:78.26:0,78,1599	0/0:27,0:27:81.14:0,81,1576	0/0:23,0:23:68.96:0,69,1358	0/0:33,0:33:99:0,99,2038	0/0:45,1:46:48.46:0,48,2501	0/0:23,0:23:66.23:0,66,1372	0/0:9,0:9:27.04:0,27,449
chr10	68421701	.	CATCTATCTCTCT	C	2863.61	PASS	AB=1.000;AC=37;AF=0.661;AN=56;BaseQRankSum=13.393;DP=715;FS=0.843;HRun=0;HaplotypeScore=225.5484;InbreedingCoeff=0.8209;MQ=63.94;MQ0=8;MQRankSum=-5.907;QD=5.76;ReadPosRankSum=-1.097;VQSLOD=2.5781;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:59.99:0,60,1357	1/1:17,0:17:10.91:49,11,0	0/0:24,0:18:36.53:0,37,361	0/0:18,0:14:32.42:0,32,322	0/0:29,0:29:75.16:0,75,2967	1/1:24,1:25:21.76:186,22,0	1/1:32,0:32:2.69:64,3,0	0/0:30,0:30:56.10:0,56,979	1/1:31,0:31:21.82:93,22,0	0/1:30,0:29:99:199,0,640	1/1:2,14:16:17.99:484,18,0	1/1:26,0:26:8.03:33,8,0	0/0:19,0:19:51.09:0,51,1807	1/1:16,0:16:5.42:23,5,0	1/1:39,0:39:29.81:121,30,0	1/1:36,0:36:32.03:128,32,0	1/1:27,0:27:10.71:44,11,0	0/0:22,0:18:17.99:0,18,772	1/1:15,0:15:38.31:313,38,0	1/1:35,0:35:19.91:87,20,0	1/1:23,0:23:3:26,3,0	1/1:25,0:25:13.90:82,14,0	0/0:20,0:20:45.03:0,45,1526	0/0:28,0:28:78.16:0,78,2576	1/1:29,0:29:18.75:77,19,0	1/1:29,2:31:47.54:669,48,0	1/1:26,2:29:30.63:318,31,0	1/1:15,0:15:18.75:77,19,0
chr10	68421702	.	ATCTATCTC	A	10009.07	PASS	AB=1.000;AC=37;AF=0.661;AN=56;BaseQRankSum=10.797;DP=717;FS=1.297;HRun=0;HaplotypeScore=164.7773;InbreedingCoeff=0.8306;MQ=63.81;MQ0=11;MQRankSum=-4.786;QD=20.14;ReadPosRankSum=0.132;VQSLOD=4.2455;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:62.98:0,63,1094	1/1:1,16:17:11.91:260,12,0	0/0:24,0:18:29.83:0,30,326	0/0:18,0:14:35.02:0,35,326	0/0:29,0:29:75.13:0,75,2158	1/1:1,24:25:24.08:633,24,0	1/1:4,28:32:3.10:100,3,0	0/0:30,0:30:56.09:0,56,842	1/1:5,26:31:24.08:652,24,0	0/1:31,0:29:63.61:393,0,64	1/1:15,0:15:17.91:277,18,0	1/1:5,21:26:9.03:245,9,0	0/0:19,0:19:51.08:0,51,1299	1/1:4,12:16:6.02:163,6,0	1/1:1,37:38:38.79:1003,39,0	1/1:2,34:36:39.12:1012,39,0	1/1:2,25:27:12.04:326,12,0	0/0:22,0:18:17.93:0,18,523	1/1:1,13:14:38.98:479,39,0	1/1:3,32:35:24.08:600,24,0	1/1:3,20:23:3.01:81,3,0	1/1:3,22:25:14.85:380,15,0	0/0:20,0:20:45.03:0,45,1146	0/0:29,0:29:81.06:0,81,1961	1/1:3,26:29:21.07:571,21,0	1/1:5,26:31:84.09:1403,84,0	1/1:4,25:29:33.11:859,33,0	1/1:2,15:15:21.07:571,21,0
chr10	68421706	.	ATCTC	A	5755.38	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=14.030;DP=692;FS=2.293;HRun=0;HaplotypeScore=140.7810;InbreedingCoeff=0.9169;MQ=63.81;MQ0=13;MQRankSum=-5.187;QD=12.19;ReadPosRankSum=0.342;VQSLOD=4.7099;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:50.06:0,50,808	1/1:17,0:17:11.82:121,12,0	0/0:22,0:16:32.93:0,33,311	0/0:16,0:13:32.70:0,33,322	0/0:33,0:33:87.11:0,87,1580	1/1:25,0:25:24.07:281,24,0	1/1:30,0:30:6.49:70,6,0	0/0:29,0:28:59.05:0,59,753	1/1:29,0:29:24.07:282,24,0	1/1:1,28:27:74.83:992,75,0	1/1:14,0:14:17.90:166,18,0	1/1:24,0:24:9.03:106,9,0	0/0:18,0:18:28.22:0,28,818	1/1:13,0:13:6.02:72,6,0	1/1:37,0:37:38.98:459,39,0	1/1:35,0:35:38.90:463,39,0	1/1:26,0:26:11.99:141,12,0	0/0:19,0:20:17.93:0,18,271	1/1:14,0:13:38.97:363,39,0	1/1:32,0:32:24:256,24,0	1/1:21,0:21:3.01:35,3,0	1/1:23,0:24:14.92:178,15,0	0/0:19,0:19:47.77:0,48,791	0/0:29,0:29:86.93:0,87,1294	1/1:27,0:27:21.06:247,21,0	1/1:29,0:29:83.99:890,84,0	1/1:29,0:29:32.94:387,33,0	1/1:17,0:15:21.06:247,21,0
chr10	68421710	.	C	CTCTCTA	244.24	PASS	AB=0.858;AC=3;AF=0.054;AN=56;BaseQRankSum=-0.875;DP=699;FS=4.107;HRun=0;HaplotypeScore=183.9181;InbreedingCoeff=-0.0637;MQ=63.03;MQ0=13;MQRankSum=-1.189;QD=3.54;ReadPosRankSum=-4.818;VQSLOD=1.2200;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:29:57.83:0,58,960	0/0:16,0:16:12.03:0,12,153	0/0:20,0:14:27.26:0,27,366	0/0:17,0:13:27.70:0,28,432	0/0:29,0:29:87.26:0,87,1535	0/0:26,0:26:24.08:0,24,331	0/0:29,0:29:3.95:0,4,76	0/0:33,0:31:4.94:0,5,788	0/1:28,0:28:5.30:5,0,303	0/0:29,0:27:38.22:0,38,811	0/0:14,0:14:17.83:0,18,202	0/0:22,0:22:9.03:0,9,125	0/0:16,0:17:51.17:0,51,952	0/1:14,0:14:8.69:9,0,74	0/0:41,0:41:12.55:0,13,566	0/0:34,0:34:39.03:0,39,554	0/0:28,0:28:17.85:0,18,232	0/1:7,15:23:15.78:317,0,16	0/0:15,0:14:30.10:0,30,397	0/0:33,0:33:7.01:0,7,270	0/0:23,0:23:3.01:0,3,42	0/0:25,0:25:15.45:0,15,215	0/0:18,0:18:47.87:0,48,749	0/0:30,0:30:90.25:0,90,1521	0/0:27,0:27:21.06:0,21,277	0/0:28,0:28:58.05:0,58,1000	0/0:30,0:30:18.25:0,18,441	0/0:17,0:15:21.07:0,21,291
chr10	68422222	.	GAA	G	4834.51	PASS	AB=0.637;AC=36;AF=0.643;AN=56;BaseQRankSum=-1.295;DP=538;FS=5.021;HRun=15;HaplotypeScore=72.3797;InbreedingCoeff=0.8227;MQ=59.98;MQ0=10;MQRankSum=-0.191;QD=14.39;ReadPosRankSum=4.077;VQSLOD=4.1800;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:28:64.93:0,65,741	1/1:4,7:12:26.44:203,26,0	0/0:22,0:1:2.88:0,3,15	0/0:23,0:14:11.66:0,12,136	0/0:19,0:25:56.94:0,57,585	1/1:4,7:11:17.93:158,18,0	1/1:4,11:14:26.91:227,27,0	0/0:11,1:30:66.15:0,66,367	0/1:6,1:9:7.96:8,0,49	1/1:7,13:22:41.01:360,41,0	1/1:3,5:10:26.22:194,26,0	1/1:2,6:9:20.73:170,21,0	0/0:10,0:10:27.09:0,27,360	1/1:5,3:10:5.35:82,5,0	1/1:4,17:21:53.89:473,54,0	1/1:9,8:17:20.07:157,20,0	1/1:11,25:35:65.57:557,66,0	0/0:7,1:18:12.48:0,12,124	1/1:7,11:16:29.92:263,30,0	1/1:12,12:24:49.24:414,49,0	0/1:3,8:13:2.92:76,0,3	1/1:9,13:22:26.65:223,27,0	0/0:20,0:25:46.42:0,46,531	0/0:14,0:16:21.06:0,21,273	1/1:7,9:20:31.38:214,31,0	1/1:6,12:18:29.68:303,30,0	1/1:4,22:26:35.21:430,35,0	1/1:1,12:14:32.60:320,33,0
chr10	68422345	.	TG	T	295.04	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.625;DP=586;FS=1.238;HRun=2;HaplotypeScore=57.3883;InbreedingCoeff=0.9688;MQ=85.66;MQ0=0;MQRankSum=-2.824;QD=26.82;ReadPosRankSum=1.166;VQSLOD=3.2814;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:96.29:0,96,1390	0/0:5,0:5:12.04:0,12,180	0/0:20,0:19:51.16:0,51,709	0/0:36,0:36:99:0,102,1433	0/0:20,0:20:57.19:0,57,847	0/0:17,0:17:51.13:0,51,734	0/0:23,0:23:66.21:0,66,968	0/0:32,0:32:93.30:0,93,1358	0/0:13,0:13:39.13:0,39,584	0/0:15,0:15:45.15:0,45,670	0/0:20,0:20:57.19:0,57,846	0/0:18,0:18:54.17:0,54,780	0/0:20,0:20:57.19:0,57,854	0/0:13,0:13:36.11:0,36,521	0/0:26,0:26:75.25:0,75,1119	0/0:27,0:27:78.24:0,78,1129	0/0:38,0:38:99:0,114,1670	1/1:0,11:11:30.10:389,30,0	0/0:12,0:12:33.07:0,33,443	0/0:24,0:24:72.24:0,72,1065	0/0:22,0:22:66.22:0,66,989	0/0:18,0:18:51.16:0,51,745	0/0:27,0:27:78.25:0,78,1146	0/0:19,0:19:57.15:0,57,829	0/0:13,0:13:36.12:0,36,540	0/0:27,0:27:78.26:0,78,1168	0/0:26,0:26:78.23:0,78,1144	0/0:10,0:10:30.10:0,30,450
chr10	68422966	.	GCT	G	14486.63	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=16.274;DP=583;FS=0.689;HRun=0;HaplotypeScore=105.2242;InbreedingCoeff=0.9943;MQ=69.93;MQ0=4;MQRankSum=-1.605;QD=36.86;ReadPosRankSum=2.551;VQSLOD=6.8868;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:87.30:0,87,1551	1/1:0,7:7:21.07:289,21,0	0/0:14,0:12:11.75:0,12,416	0/0:15,0:14:33.08:0,33,557	0/0:16,0:16:48.16:0,48,840	1/1:1,18:19:42.14:588,42,0	1/1:2,20:22:54.18:754,54,0	1/1:1,26:27:78.24:1057,78,0	0/0:14,0:14:42.14:0,42,749	0/0:27,0:27:78.26:0,78,1354	0/0:10,0:10:30.10:0,30,535	1/1:2,18:21:57.19:798,57,0	0/0:19,0:19:57.18:0,57,995	1/1:0,18:18:51.17:714,51,0	1/1:0,30:30:87.29:1218,87,0	1/1:0,21:21:57.19:798,57,0	1/1:1,27:28:72.09:1008,72,0	1/1:0,15:15:42.10:565,42,0	1/1:6,16:22:48.15:654,48,0	1/1:2,13:14:33.11:462,33,0	1/1:1,13:14:33.11:462,33,0	1/1:2,17:19:54.18:755,54,0	0/0:18,0:18:54.19:0,54,964	0/0:28,0:27:75.26:0,75,1349	1/1:4,27:30:78.26:1092,78,0	1/1:1,24:24:69.23:964,69,0	1/1:0,32:32:93.31:1301,93,0	1/1:1,26:27:72.24:1008,72,0
chr10	68423348	.	T	TCGC	1174.05	PASS	AC=4;AF=0.074;AN=54;BaseQRankSum=1.318;DP=370;FS=2.982;HRun=0;HaplotypeScore=58.0317;InbreedingCoeff=0.5526;MQ=65.88;MQ0=0;MQRankSum=-0.237;QD=34.53;ReadPosRankSum=3.418;VQSLOD=3.9127;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:78.21:0,78,1077	0/0:2,0:2:6.02:0,6,82	0/0:2,0:2:3.01:0,3,33	0/0:3,0:3:2.04:0,2,6	0/0:10,0:10:9.03:0,9,133	./.	0/0:41,0:41:92.44:0,92,1378	1/1:6,0:6:3.01:31,3,0	0/0:9,0:9:23.82:0,24,348	0/0:11,0:11:18.06:0,18,267	0/0:2,0:2:6.02:0,6,89	0/0:11,0:11:21.07:0,21,308	0/0:7,0:7:18.06:0,18,267	0/0:10,0:10:27.09:0,27,401	0/0:6,0:6:12.04:0,12,178	0/0:5,0:5:9.03:0,9,134	0/0:37,0:37:90.30:0,90,1334	1/1:5,22:28:60.21:1250,60,0	0/0:10,0:10:21.07:0,21,311	0/0:1,0:1:3.01:0,3,39	0/0:56,0:56:99:0,117,1697	0/0:5,0:5:15.04:0,15,202	0/0:4,0:4:6.01:0,6,69	0/0:28,0:28:72.24:0,72,1062	0/0:11,0:11:30.10:0,30,445	0/0:19,0:19:39.11:0,39,534	0/0:4,0:4:12.04:0,12,178	0/0:12,0:12:15.05:0,15,217
chr10	68424181	.	T	TATACATACAC	1629.37	PASS	AB=0.853;AC=15;AF=0.395;AN=38;BaseQRankSum=5.059;DP=172;FS=9.883;HRun=0;HaplotypeScore=68.1542;InbreedingCoeff=0.2003;MQ=47.33;MQ0=7;MQRankSum=-4.575;QD=28.09;ReadPosRankSum=0.409;VQSLOD=1.7603;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:33.11:0,33,960	./.	0/0:26,0:8:21.96:0,22,679	0/0:23,0:10:20.23:0,20,701	0/0:7,0:7:15.05:0,15,495	0/0:4,5:9:0:0,0,0	./.	0/1:26,0:26:99:118,0,1519	./.	0/1:2,2:4:89.85:306,0,90	./.	./.	0/0:3,0:3:9.03:0,9,288	1/1:1,0:1:3.01:135,3,0	./.	1/1:1,2:3:2.20:152,2,0	1/1:6,2:8:4.93:240,5,0	1/1:2,0:2:0.89:2,1,0	0/1:3,0:3:92.85:138,0,93	./.	./.	./.	0/0:7,0:7:15.05:0,15,439	0/0:6,0:6:15.05:0,15,466	0/0:3,4:7:0.47:0,0,1	0/1:3,0:3:99:147,0,188	0/1:1,2:3:92.82:98,0,93	1/1:4,1:5:9.03:420,9,0
chr10	68424187	.	T	TACAC	635.05	PASS	AB=0.860;AC=13;AF=0.342;AN=38;BaseQRankSum=5.488;DP=172;FS=10.155;HRun=0;HaplotypeScore=47.3495;InbreedingCoeff=0.1913;MQ=45.29;MQ0=11;MQRankSum=-3.043;QD=19.85;ReadPosRankSum=-0.560;VQSLOD=1.6523;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:27.08:0,27,504	./.	0/0:35,0:11:22.24:0,22,466	0/0:34,0:11:27.05:0,27,492	0/0:6,0:6:15.05:0,15,300	0/0:7,0:7:0:0,0,0	./.	0/0:19,0:19:51.18:0,51,1013	./.	0/1:6,0:3:53.87:68,0,54	./.	1/1:2,0:1:2.97:20,3,0	0/0:3,0:3:9.03:0,9,180	./.	./.	1/1:3,0:3:2.66:59,3,0	1/1:4,2:6:5.40:141,5,0	1/1:1,0:1:3.01:40,3,0	0/1:2,1:2:53.84:77,0,54	./.	./.	./.	0/0:8,0:8:15.05:0,15,299	0/0:6,0:6:15.03:0,15,264	0/0:5,0:5:0:0,0,0	0/1:2,1:3:70.48:70,0,111	0/1:3,0:3:53.82:63,0,54	0/1:3,1:4:47.79:222,0,48
chr10	68424287	.	AATTTT	A	1685.68	PASS	AC=28;AF=0.609;AN=46;BaseQRankSum=2.527;DP=145;FS=8.505;HRun=0;HaplotypeScore=43.2903;InbreedingCoeff=0.6727;MQ=57.14;MQ0=16;MQRankSum=-3.571;QD=22.18;ReadPosRankSum=-0.429;VQSLOD=1.5068;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:3:9.03:0,9,235	1/1:0,3:3:2.99:36,3,0	0/0:17,0:4:5.25:0,5,78	0/0:27,0:9:18.42:0,18,332	0/0:4,0:4:12.04:0,12,351	1/1:0,6:6:5.86:40,6,0	./.	1/1:5,16:21:21.03:664,21,0	./.	0/0:4,0:3:6.02:0,6,121	./.	1/1:1,3:4:8.88:60,9,0	0/0:2,0:2:6.02:0,6,197	0/0:1,0:1:1.82:0,2,5	1/1:0,2:2:5.93:40,6,0	1/1:0,3:3:8.92:62,9,0	1/1:4,5:7:11.84:137,12,0	0/0:5,0:4:5.74:0,6,37	1/1:0,5:5:14.83:231,15,0	1/1:0,5:5:2.86:20,3,0	./.	1/1:0,1:1:2.97:20,3,0	./.	0/0:4,0:4:12.04:0,12,374	1/1:0,2:2:5.93:40,6,0	1/1:1,4:5:8.93:145,9,0	1/1:0,5:5:8.96:150,9,0	1/1:1,4:5:14.95:207,15,0
chr10	68424774	.	TGTGG	T	12238.72	PASS	AB=1.000;AC=38;AF=0.679;AN=56;BaseQRankSum=1.332;DP=459;FS=0.923;HRun=0;HaplotypeScore=87.4640;InbreedingCoeff=0.8046;MQ=71.85;MQ0=2;MQRankSum=-4.154;QD=36.53;ReadPosRankSum=7.448;VQSLOD=4.2800;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:63.02:0,63,1016	1/1:0,9:9:24.08:474,24,0	0/0:10,0:10:9.78:0,10,240	0/0:17,0:15:24.23:0,24,568	0/0:13,0:13:27.01:0,27,508	1/1:0,15:15:21.07:415,21,0	1/1:1,20:21:51.18:1006,51,0	0/1:19,0:19:40:108,0,40	1/1:0,16:16:36.12:713,36,0	0/1:13,0:13:69.75:84,0,70	0/0:3,0:3:5.88:0,6,35	1/1:1,16:17:27.09:534,27,0	0/0:14,0:14:36.02:0,36,620	1/1:1,14:14:21.07:416,21,0	1/1:0,12:12:30.10:570,30,0	1/1:1,11:12:17.88:354,18,0	1/1:1,22:22:48.16:942,48,0	1/1:3,0:14:16.49:160,16,0	1/1:1,13:14:33.05:572,33,0	1/1:0,20:20:57.09:1042,57,0	1/1:1,26:28:54.17:1067,54,0	1/1:3,16:19:33.11:654,33,0	0/0:18,0:18:38.84:0,39,498	0/0:18,0:18:38.79:0,39,820	1/1:1,13:14:30.10:594,30,0	1/1:0,14:14:39.12:728,39,0	1/1:0,23:24:59.51:1095,60,0	1/1:0,16:14:36.12:711,36,0
chr10	68424775	.	GT	G	5171	PASS	AB=1.000;AC=43;AF=0.768;AN=56;BaseQRankSum=8.364;DP=446;FS=0.490;HRun=1;HaplotypeScore=93.3545;InbreedingCoeff=0.8557;MQ=74.58;MQ0=2;MQRankSum=-3.446;QD=14.95;ReadPosRankSum=6.936;VQSLOD=4.3602;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:53.09:0,53,542	1/1:9,0:9:23.85:171,24,0	0/0:13,0:13:13.36:0,13,161	0/1:19,0:17:46.80:47,0,167	0/0:12,0:12:23.28:0,23,262	1/1:15,0:15:20.86:149,21,0	1/1:20,0:20:50.65:362,51,0	1/1:12,5:17:23.13:245,23,0	1/1:16,0:16:35.77:258,36,0	1/1:0,13:13:23.82:239,24,0	1/1:1,3:4:6.02:83,6,0	1/1:16,0:16:26.83:193,27,0	0/0:13,0:13:29.74:0,30,306	1/1:14,0:13:20.87:151,21,0	1/1:12,0:12:28.06:194,28,0	1/1:11,0:11:17.53:126,18,0	1/1:23,0:22:47.60:336,48,0	1/1:13,0:13:26.20:196,26,0	1/1:13,0:13:32.68:231,33,0	1/1:20,0:20:56.59:401,57,0	1/1:28,0:27:53.62:385,54,0	1/1:16,0:16:32.80:237,33,0	0/0:14,3:17:8.35:0,8,277	0/0:18,0:18:18.86:0,19,336	1/1:13,0:13:29.82:215,30,0	1/1:14,0:14:38.74:280,39,0	1/1:24,0:22:59.01:415,59,0	1/1:16,0:14:35.77:257,36,0
chr10	68424776	.	TG	T	1446.97	PASS	AB=0.933;AC=45;AF=0.804;AN=56;BaseQRankSum=7.401;DP=458;FS=25.264;HRun=11;HaplotypeScore=106.9977;InbreedingCoeff=0.2885;MQ=76.79;MQ0=2;MQRankSum=-4.024;QD=3.54;ReadPosRankSum=6.311;VQSLOD=-0.1882;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,1:33:23.17:0,23,385	1/1:9,0:9:17.76:54,18,0	0/0:16,0:16:13.69:0,14,137	0/1:15,2:17:17.80:18,0,165	0/1:12,1:13:3.60:4,0,145	1/1:15,0:15:15.54:47,16,0	1/1:20,0:20:37.74:115,38,0	1/1:15,1:16:9.51:54,10,0	1/1:16,0:16:26.64:82,27,0	0/1:13,0:13:24.53:25,0,32	0/1:6,0:6:16.90:20,0,17	1/1:16,0:16:19.98:62,20,0	0/1:11,2:14:3.60:4,0,164	1/1:14,0:13:15.54:48,16,0	1/1:12,0:12:15.27:54,15,0	1/1:11,0:11:13.31:40,13,0	1/1:23,0:22:35.12:106,35,0	1/1:13,0:13:26:105,26,0	1/1:13,0:13:17.76:55,18,0	1/1:20,0:20:37.07:112,37,0	1/1:28,0:27:39.94:122,40,0	1/1:16,0:16:24.42:75,24,0	0/1:16,0:16:16.97:17,0,71	0/1:15,4:19:35.02:35,0,258	1/1:13,0:13:22.20:68,22,0	1/1:14,0:14:25.49:77,25,0	1/1:24,0:22:42.56:132,43,0	1/1:16,0:14:26.46:81,26,0
chr10	68426245	.	CT	C	5393.98	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=6.432;DP=506;FS=8.431;HRun=11;HaplotypeScore=83.3333;InbreedingCoeff=0.8954;MQ=78.40;MQ0=1;MQRankSum=0.717;QD=17.46;ReadPosRankSum=3.696;VQSLOD=5.5486;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,1:21:41.09:0,41,584	1/1:1,12:13:10.60:224,11,0	0/0:28,0:21:12.51:0,13,291	0/0:23,2:22:10.53:0,11,251	0/0:22,0:22:49.46:0,49,499	1/1:3,11:14:17.95:148,18,0	1/1:4,15:19:38.93:320,39,0	1/1:7,18:25:24.90:404,25,0	1/1:4,15:19:47.94:394,48,0	0/0:19,0:19:48.04:0,48,477	0/0:16,0:16:38.99:0,39,376	1/1:4,9:13:32.94:270,33,0	0/0:23,0:24:41.80:0,42,582	1/1:3,10:13:29.94:245,30,0	1/1:3,17:20:47.94:394,48,0	1/1:0,19:19:53.94:443,54,0	1/1:4,14:18:41.95:345,42,0	0/0:11,0:12:35.92:0,36,366	1/1:5,17:22:32.07:378,32,0	1/1:5,9:14:4.32:195,4,0	1/1:5,15:20:37.78:377,38,0	1/1:2,9:12:31.90:248,32,0	0/0:19,0:19:49.73:0,50,478	0/0:10,1:11:2.44:0,2,231	1/1:8,6:14:24.16:179,24,0	1/1:7,16:23:1.38:364,1,0	1/1:8,17:25:44.82:368,45,0	1/1:1,5:6:11.98:97,12,0
chr10	68427270	.	CG	C	4134.46	PASS	AB=0.705;AC=40;AF=0.769;AN=52;BaseQRankSum=10.773;DP=294;FS=17.826;HRun=3;HaplotypeScore=67.7018;InbreedingCoeff=0.7306;MQ=39.28;MQ0=58;MQRankSum=-1.545;QD=20.57;ReadPosRankSum=-1.854;VQSLOD=1.9146;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:31:80.99:0,81,1002	1/1:0,4:4:12.04:148,12,0	./.	./.	0/0:23,0:23:45.02:0,45,645	1/1:1,10:10:27.08:335,27,0	1/1:2,3:3:9.03:112,9,0	1/1:10,6:4:12.04:149,12,0	1/1:0,7:7:15.05:185,15,0	1/1:0,6:6:18.06:223,18,0	1/1:0,7:7:21.07:260,21,0	1/1:1,6:6:18.06:223,18,0	0/0:6,0:5:12.04:0,12,172	1/1:2,5:5:15.05:185,15,0	0/1:2,13:13:15.79:270,0,16	1/1:0,11:11:30.09:372,30,0	1/1:9,6:6:15.05:186,15,0	0/1:18,3:14:0.95:1,0,436	1/1:3,6:5:15.05:186,15,0	1/1:1,6:6:15.05:186,15,0	1/1:13,2:3:3:37,3,0	1/1:0,2:2:6.02:74,6,0	0/0:9,0:9:18.06:0,18,258	0/0:18,0:16:39.13:0,39,560	1/1:0,10:10:24.08:297,24,0	1/1:1,9:9:27.08:334,27,0	1/1:1,9:8:21.07:260,21,0	1/1:3,3:3:9.03:112,9,0
chr10	68427385	.	A	AG	491.81	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-2.520;DP=686;FS=1.042;HRun=1;HaplotypeScore=96.5075;InbreedingCoeff=0.9969;MQ=82.24;MQ0=1;MQRankSum=-1.142;QD=35.13;ReadPosRankSum=-0.255;VQSLOD=3.4217;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,111,1431	0/0:10,0:10:30.10:0,30,389	0/0:25,0:25:66.21:0,66,856	0/0:21,0:20:33.17:0,33,602	0/0:20,0:20:60.20:0,60,779	0/0:21,0:21:57.18:0,57,739	0/0:13,0:13:36.12:0,36,465	0/0:26,0:24:69.20:0,69,851	0/0:27,0:27:75.23:0,75,958	0/0:35,0:35:99:0,99,1269	0/0:24,0:24:72.23:0,72,934	0/0:27,0:27:71.89:0,72,911	0/0:15,0:15:45.15:0,45,584	0/0:29,0:29:65.91:0,66,841	0/0:38,0:38:99:0,105,1327	0/0:29,0:29:75.23:0,75,960	0/0:15,0:15:39.12:0,39,493	1/1:2,12:14:42.11:587,42,0	0/0:21,0:20:57.15:0,57,713	0/0:28,0:28:81.26:0,81,1051	0/0:35,0:34:96.29:0,96,1219	0/0:30,0:30:90.29:0,90,1156	0/0:21,0:21:60.18:0,60,754	0/0:31,0:31:93.29:0,93,1194	0/0:10,0:10:24.08:0,24,311	0/0:35,0:35:99:0,105,1339	0/0:34,0:34:96.26:0,96,1223	0/0:12,0:12:36.12:0,36,467
chr10	68427447	.	C	CTG	25143.70	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=-15.070;DP=689;FS=2.003;HRun=0;HaplotypeScore=68.2169;InbreedingCoeff=0.9988;MQ=74.72;MQ0=3;MQRankSum=-4.752;QD=48.17;ReadPosRankSum=2.889;VQSLOD=6.2785;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,99,1467	1/1:2,7:11:24.08:456,24,0	0/0:19,0:18:51.17:0,51,758	0/0:23,0:23:59.97:0,60,811	0/0:28,0:28:81.24:0,81,1174	1/1:0,21:21:54.19:1042,54,0	1/1:1,28:29:75.26:1447,75,0	1/1:0,33:33:96.30:1763,96,0	1/1:0,31:31:78.27:1505,78,0	1/1:1,18:19:54.14:974,54,0	1/1:2,13:16:36.12:675,36,0	1/1:0,19:20:51.17:983,51,0	0/0:16,0:16:42.13:0,42,621	1/1:0,28:28:57.20:1099,57,0	1/1:1,47:48:99:2310,120,0	1/1:1,32:34:81.28:1563,81,0	1/1:1,23:23:66.23:1252,66,0	1/1:1,17:17:42.14:810,42,0	1/1:2,13:15:33.11:637,33,0	1/1:0,20:20:57.20:1090,57,0	1/1:3,43:47:99:2223,117,0	1/1:0,29:29:84.29:1621,84,0	0/0:17,0:17:42.14:0,42,643	0/0:30,0:30:90.23:0,90,1309	1/1:1,14:15:36.12:695,36,0	1/1:2,22:24:66.18:1205,66,0	1/1:1,27:29:71.95:1387,72,0	1/1:1,7:8:21.07:405,21,0
chr10	68428042	.	T	TA	415.69	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-1.123;DP=557;FS=2.620;HRun=0;HaplotypeScore=158.1812;InbreedingCoeff=0.7154;MQ=49.65;MQ0=30;MQRankSum=-0.184;QD=15.99;ReadPosRankSum=-2.699;VQSLOD=4.5771;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:19:39.30:0,39,340	0/0:2,0:2:6:0,6,52	0/0:65,0:18:19.62:0,20,196	0/0:66,0:17:7.77:0,8,139	0/0:24,0:23:56.44:0,56,453	0/0:7,0:5:14.99:0,15,130	0/0:11,0:11:23.78:0,24,174	1/1:12,14:25:62.06:510,62,0	0/0:10,0:10:28.87:0,29,182	0/0:30,0:28:77.72:0,78,687	0/0:21,0:21:54.67:0,55,458	0/0:15,0:15:37.70:0,38,264	0/0:6,0:6:11.73:0,12,82	0/0:14,0:13:34.34:0,34,223	0/0:9,0:9:23.08:0,23,167	0/0:12,0:12:35.44:0,35,255	0/0:20,0:17:40.93:0,41,275	0/0:10,0:10:26.46:0,26,175	0/0:20,0:18:52.79:0,53,382	0/0:24,0:24:68.36:0,68,455	0/0:6,0:5:11.96:0,12,96	0/0:18,0:17:46.81:0,47,336	0/0:18,0:15:23.64:0,24,202	0/0:7,0:5:5.89:0,6,38	0/0:27,0:26:73.41:0,73,521	0/0:26,0:25:71:0,71,518	0/0:28,0:26:70.86:0,71,531	0/0:10,0:7:19.47:0,19,143
chr10	68428047	.	T	TTG	3008.44	PASS	AB=0.976;AC=25;AF=0.446;AN=56;BaseQRankSum=0.837;DP=565;FS=7.675;HRun=0;HaplotypeScore=157.8482;InbreedingCoeff=0.2406;MQ=47.00;MQ0=36;MQRankSum=0.073;QD=10.13;ReadPosRankSum=2.885;VQSLOD=2.5893;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:18:36.09:0,36,293	1/1:2,0:2:5.98:57,6,0	0/0:72,0:17:24.97:0,25,181	0/0:74,0:19:16.70:0,17,136	0/0:26,0:25:54.50:0,54,389	0/1:9,0:7:15.19:60,0,15	1/1:10,1:11:23.92:222,24,0	1/1:30,0:29:33.33:103,33,0	1/1:10,0:10:16.09:165,16,0	0/0:28,0:26:9.91:0,10,150	0/1:21,0:21:2.06:2,0,110	0/1:15,0:15:33.33:205,0,33	0/0:6,0:6:11.71:0,12,71	1/1:12,0:12:28.17:199,28,0	0/1:8,1:9:14.01:86,0,14	1/1:9,0:10:11.74:165,12,0	0/1:18,0:15:2.15:110,0,2	0/0:10,0:10:14.59:0,15,88	0/1:16,1:15:45.58:168,0,46	0/1:23,0:24:10.92:367,0,11	0/0:4,0:3:5:0,5,26	0/1:19,0:16:11.83:211,0,12	0/0:17,0:14:25.43:0,25,209	0/0:7,0:5:0.40:0,0,16	0/1:25,0:24:2.20:310,0,2	1/1:24,1:24:44.02:445,44,0	0/1:26,1:26:4.19:255,0,4	0/1:10,0:7:33.19:61,0,33
chr10	68428048	.	T	TG	439.49	PASS	AB=0.776;AC=17;AF=0.304;AN=56;BaseQRankSum=-0.279;DP=564;FS=25.013;HRun=0;HaplotypeScore=159.7428;InbreedingCoeff=-0.1661;MQ=46.36;MQ0=37;MQRankSum=-0.019;QD=1.89;ReadPosRankSum=3.407;VQSLOD=1.3958;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:18:36.30:0,36,314	1/1:1,1:2:5.92:39,6,0	0/0:77,0:19:27.48:0,27,179	0/0:72,0:18:1.62:0,2,96	0/0:26,0:25:57.04:0,57,457	0/1:7,2:7:14.56:15,0,35	1/1:5,6:11:12.69:58,13,0	0/0:29,0:28:56.69:0,57,227	0/1:8,2:10:3.79:4,0,59	0/0:29,0:27:61.15:0,61,415	0/0:20,1:21:51.73:0,52,360	0/1:8,7:15:40.59:41,0,49	0/0:6,0:6:11.90:0,12,89	0/1:9,4:12:16.55:38,0,17	0/1:8,1:9:26.40:26,0,62	0/1:5,5:10:10.99:11,0,44	0/1:14,4:15:14.01:14,0,64	0/0:10,0:10:5.48:0,5,45	0/1:14,3:15:36.38:36,0,95	0/1:14,11:24:66.74:114,0,67	0/0:4,0:3:5.92:0,6,39	0/1:14,5:16:44.22:44,0,74	0/0:17,0:14:25.70:0,26,214	0/0:7,0:5:5.89:0,6,38	0/1:14,9:22:54.34:54,0,71	0/1:15,9:22:49.66:85,0,50	0/1:21,6:25:19.91:20,0,146	0/0:7,3:7:6.10:0,6,76
chr10	68428053	.	T	TG	2121.17	PASS	AB=0.845;AC=29;AF=0.518;AN=56;BaseQRankSum=3.248;DP=552;FS=44.106;HRun=0;HaplotypeScore=151.7384;InbreedingCoeff=0.0512;MQ=44.79;MQ0=36;MQRankSum=-1.216;QD=5.33;ReadPosRankSum=-0.405;VQSLOD=1.4715;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:17:35.68:0,36,289	1/1:1,1:2:2.83:29,3,0	0/0:73,0:19:9.62:0,10,143	0/1:69,1:16:7.79:8,0,58	0/0:25,0:24:55.59:0,56,426	1/1:7,2:7:4.15:26,4,0	1/1:6,6:12:12.68:92,13,0	1/1:29,0:28:67.92:466,68,0	0/1:9,2:11:0.30:76,0,0	0/1:27,0:25:33.42:33,0,52	0/1:21,1:22:27.40:27,0,33	0/1:6,7:13:33.29:99,0,33	0/0:6,0:6:11.91:0,12,89	1/1:9,4:12:16.76:105,17,0	0/1:9,1:10:12.43:28,0,12	0/1:6,5:11:10.22:88,0,10	0/1:14,4:15:4.40:79,0,4	0/1:7,0:7:2.70:80,0,3	0/1:17,3:17:23.20:116,0,23	0/1:15,10:23:26:184,0,26	0/0:4,0:3:4.20:0,4,22	1/1:14,5:16:1.99:123,2,0	0/0:17,0:15:25.41:0,25,203	0/0:7,0:5:8.30:0,8,42	1/1:13,9:21:21.99:224,22,0	1/1:14,9:21:37.05:215,37,0	0/1:18,6:23:18.42:158,0,18	0/1:7,3:7:26.91:39,0,27
chr10	68428055	.	TTTG	T	3514.05	PASS	AB=1.000;AC=42;AF=0.750;AN=56;BaseQRankSum=5.550;DP=546;FS=4.900;HRun=0;HaplotypeScore=157.1543;InbreedingCoeff=0.4120;MQ=44.69;MQ0=37;MQRankSum=-0.680;QD=9.20;ReadPosRankSum=4.315;VQSLOD=2.5063;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:17:1.30:1,0,140	1/1:1,0:1:2.99:23,3,0	0/0:72,0:18:29.65:0,30,219	0/0:67,0:15:26.75:0,27,187	0/1:26,0:25:29.83:30,0,185	1/1:8,1:7:13.41:94,13,0	1/1:12,0:12:22.02:155,22,0	1/1:29,0:28:33.83:176,34,0	1/1:12,0:11:26.15:172,26,0	1/1:27,0:25:32.29:250,32,0	1/1:21,0:22:45.76:221,46,0	1/1:13,0:13:25.62:165,26,0	0/1:6,0:6:17.84:18,0,19	1/1:13,0:12:28.43:168,28,0	1/1:10,1:11:18.32:132,18,0	1/1:11,0:11:27.73:168,28,0	1/1:19,0:16:29.02:157,29,0	0/1:8,0:7:0.26:46,0,0	0/1:17,0:14:10.15:128,0,10	1/1:22,2:22:36.87:279,37,0	1/1:3,1:3:2.69:27,3,0	1/1:17,1:15:35.48:217,35,0	0/0:17,0:15:7.42:0,7,121	0/0:7,0:5:0.58:0,1,14	1/1:20,1:20:31.48:219,31,0	1/1:21,2:21:52.33:315,52,0	1/1:22,2:22:39.94:290,40,0	0/1:10,0:7:4.67:65,0,5
chr10	68428056	.	TTG	T	3204.09	PASS	AB=0.993;AC=46;AF=0.821;AN=56;BaseQRankSum=6.602;DP=535;FS=2.745;HRun=0;HaplotypeScore=149.4288;InbreedingCoeff=0.3459;MQ=43.50;MQ0=37;MQRankSum=-0.667;QD=8.01;ReadPosRankSum=4.745;VQSLOD=3.5575;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:21,1:17:47.30:47,0,66	1/1:1,0:1:2.92:17,3,0	0/0:70,0:18:24.52:0,25,184	0/0:63,0:14:20.51:0,21,146	0/1:26,0:25:72.17:72,0,94	1/1:7,1:6:11.80:77,12,0	1/1:12,0:12:17.89:103,18,0	1/1:29,0:28:46.79:173,47,0	1/1:10,0:11:26.55:140,27,0	1/1:11,14:23:53.75:425,54,0	1/1:10,12:22:54.26:374,54,0	1/1:13,0:13:30.18:180,30,0	0/1:6,0:6:0.17:32,0,0	1/1:12,0:12:21.32:127,21,0	1/1:8,1:10:13.24:88,13,0	1/1:11,0:11:27.76:143,28,0	1/1:19,0:16:29.95:160,30,0	1/1:7,0:6:2.53:32,3,0	0/1:17,0:14:12:98,0,12	1/1:24,0:22:29.87:214,30,0	1/1:4,0:3:2.74:14,3,0	1/1:16,0:14:32.31:160,32,0	0/1:17,0:15:3.53:4,0,50	0/1:7,0:5:1.34:1,0,13	1/1:21,0:20:34.91:178,35,0	1/1:21,1:21:42.99:215,43,0	1/1:24,0:22:41.58:222,42,0	1/1:10,0:7:11.03:63,11,0
chr10	68428057	.	TGG	T	3644.40	PASS	AB=0.938;AC=45;AF=0.804;AN=56;BaseQRankSum=1.596;DP=507;FS=2.942;HRun=2;HaplotypeScore=144.2409;InbreedingCoeff=0.2026;MQ=44.01;MQ0=36;MQRankSum=0.044;QD=9.52;ReadPosRankSum=4.387;VQSLOD=0.9301;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:18,2:15:13.15:115,0,13	1/1:1,0:1:2.22:7,2,0	0/0:60,4:18:22.67:0,23,223	0/0:58,0:13:14.26:0,14,171	0/1:23,2:25:35.28:152,0,35	1/1:8,0:6:11.40:69,11,0	1/1:12,0:12:19.95:132,20,0	0/1:28,0:27:9.36:57,0,9	1/1:11,1:11:15.92:190,16,0	1/1:25,0:23:45.56:174,46,0	1/1:21,0:21:34.25:202,34,0	1/1:7,6:13:31.14:220,31,0	0/1:5,0:5:3.42:36,0,3	1/1:10,1:10:23.53:171,24,0	1/1:9,1:10:19.49:147,19,0	1/1:10,1:11:26.79:210,27,0	1/1:17,2:16:15:198,15,0	1/1:7,0:6:9.56:47,10,0	0/1:15,0:12:24.84:61,0,25	1/1:20,1:20:48.34:366,48,0	1/1:4,0:3:2.98:22,3,0	1/1:16,0:13:24.96:143,25,0	0/1:11,5:14:16.17:65,0,16	1/1:6,1:5:7.36:49,7,0	1/1:19,1:19:31.60:224,32,0	1/1:19,2:19:40.29:276,40,0	1/1:22,1:21:34.14:275,34,0	0/1:10,0:7:1.90:37,0,2
chr10	68428062	.	TTGG	T	2250.93	PASS	AB=1.000;AC=40;AF=0.714;AN=56;BaseQRankSum=2.401;DP=503;FS=10.477;HRun=0;HaplotypeScore=156.1725;InbreedingCoeff=0.0016;MQ=40.66;MQ0=34;MQRankSum=-0.060;QD=5.85;ReadPosRankSum=-0.282;VQSLOD=2.3871;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:19,0:14:82.03:98,0,82	0/0:2,0:2:0:0,0,0	0/0:59,0:17:25.15:0,25,341	0/0:57,0:12:25.15:0,25,145	0/1:25,0:24:74.95:75,0,291	0/1:10,0:8:8.73:24,0,9	1/1:14,0:14:15.21:67,15,0	1/1:30,0:29:10.56:140,11,0	1/1:14,0:13:18.99:141,19,0	1/1:24,1:23:31.55:323,32,0	1/1:17,3:20:10.44:288,10,0	0/1:12,0:12:16.10:32,0,16	0/1:5,0:5:27.44:27,0,58	1/1:11,0:11:17.82:155,18,0	1/1:10,0:10:2.01:49,2,0	1/1:8,0:8:12.07:73,12,0	1/1:16,0:13:7.94:73,8,0	0/1:7,0:5:13.92:96,0,14	0/1:17,0:13:17.88:24,0,18	1/1:23,0:21:30.16:195,30,0	1/1:5,0:4:2.22:7,2,0	0/1:17,0:14:9.58:37,0,10	0/1:16,0:14:13.65:14,0,76	1/1:6,0:4:8.13:40,8,0	0/1:20,0:19:35.44:88,0,35	1/1:23,0:21:31.18:175,31,0	1/1:22,0:20:10.71:120,11,0	1/1:10,0:7:3.07:52,3,0
chr10	68428064	.	GGTTT	G	6833.72	PASS	AB=0.944;AC=40;AF=0.714;AN=56;BaseQRankSum=0.529;DP=487;FS=5.503;HRun=0;HaplotypeScore=143.0044;InbreedingCoeff=0.2035;MQ=40.85;MQ0=34;MQRankSum=1.052;QD=16.92;ReadPosRankSum=-0.152;VQSLOD=4.3065;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:19,0:14:26.18:26,0,191	1/1:2,0:2:2.99:23,3,0	0/0:56,0:16:26.22:0,26,383	0/1:56,0:12:26.30:26,0,107	0/1:26,0:25:24.17:24,0,503	1/1:8,2:8:17.95:237,18,0	1/1:8,5:13:18.06:278,18,0	1/1:21,8:28:79.91:1091,80,0	1/1:12,2:13:35.80:383,36,0	0/1:20,0:20:65.75:66,0,91	0/1:20,0:20:43.24:77,0,43	0/1:9,3:12:17.08:204,0,17	0/0:5,0:5:6.12:0,6,67	1/1:5,6:11:29.98:402,30,0	1/1:10,0:10:18.57:187,19,0	1/1:4,4:8:20.98:292,21,0	1/1:15,1:13:32.36:322,32,0	0/1:8,0:6:26.79:84,0,27	1/1:13,4:13:32.64:353,33,0	1/1:13,8:19:32.86:529,33,0	1/1:3,1:3:3.01:31,3,0	1/1:11,4:12:27.05:329,27,0	0/0:16,0:14:13.10:0,13,202	0/0:5,0:4:5.04:0,5,17	1/1:13,6:18:42.99:506,43,0	1/1:17,6:21:49.80:668,50,0	1/1:13,6:17:35.19:512,35,0	0/1:6,3:7:24.09:184,0,24
chr10	68428065	.	G	GTTT	2004.44	PASS	AB=1.000;AC=43;AF=0.768;AN=56;BaseQRankSum=4.921;DP=493;FS=3.442;HRun=10;HaplotypeScore=158.9758;InbreedingCoeff=0.5006;MQ=39.03;MQ0=34;MQRankSum=0.145;QD=5.90;ReadPosRankSum=2.575;VQSLOD=0.0515;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:21,0:16:39.61:40,0,40	0/1:2,0:2:0:0,0,0	0/0:56,0:16:20.64:0,21,166	0/0:55,0:11:8.76:0,9,49	0/0:26,0:25:21.96:0,22,228	1/1:10,0:8:11.56:33,12,0	1/1:13,0:13:8.62:23,9,0	1/1:29,0:28:6.75:22,7,0	1/1:13,0:12:19.14:62,19,0	1/1:22,2:22:54.93:595,55,0	1/1:16,5:21:46.30:588,46,0	0/1:12,0:12:2.86:3,0,28	0/1:5,0:5:8.80:9,0,17	1/1:11,0:11:14.03:66,14,0	1/1:10,0:10:11.84:51,12,0	1/1:8,0:8:9.50:29,9,0	1/1:19,0:15:22.94:83,23,0	0/1:9,0:7:18.13:49,0,18	1/1:17,0:13:6.12:16,6,0	1/1:21,0:19:28.70:140,29,0	1/1:3,0:2:1.25:3,1,0	1/1:15,0:12:13.44:43,13,0	0/0:16,0:14:15.10:0,15,80	1/1:6,0:5:4.81:21,5,0	1/1:19,0:18:26.87:91,27,0	1/1:23,0:21:25.23:112,25,0	1/1:19,0:17:22.46:70,22,0	1/1:9,0:7:7.82:23,8,0
chr10	68428068	.	T	TG	5634.80	PASS	AB=0.909;AC=34;AF=0.607;AN=56;BaseQRankSum=-1.148;DP=507;FS=18.766;HRun=0;HaplotypeScore=131.9622;InbreedingCoeff=0.8048;MQ=39.03;MQ0=34;MQRankSum=-0.055;QD=20.34;ReadPosRankSum=3.575;VQSLOD=4.7676;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:16:29.67:0,30,220	0/0:1,0:3:0:0,0,0	0/0:55,0:16:14.39:0,14,235	0/0:55,0:11:7.41:0,7,99	0/0:24,0:23:51.90:0,52,361	1/1:4,5:9:18.06:242,18,0	1/1:7,0:14:17.97:216,18,0	1/1:13,19:31:27.13:812,27,0	1/1:7,6:12:32.97:352,33,0	0/0:24,0:21:28.88:0,29,241	0/0:21,0:21:51.27:0,51,255	1/1:11,0:11:15.58:155,16,0	0/0:5,0:5:11.77:0,12,80	1/1:10,1:11:26.71:281,27,0	1/1:5,4:11:18.79:182,19,0	1/1:6,3:9:20.89:232,21,0	1/1:15,5:16:34.38:357,34,0	0/1:10,0:7:4.16:4,0,29	1/1:7,10:13:35.48:372,35,0	1/1:18,3:20:16.72:387,17,0	1/1:2,0:2:3.01:41,3,0	1/1:6,10:14:26.86:320,27,0	0/0:16,0:14:23.65:0,24,169	0/0:6,0:5:6.94:0,7,31	1/1:13,7:20:11.13:485,11,0	1/1:16,6:22:25.82:527,26,0	1/1:10,9:19:41.13:486,41,0	0/1:7,2:7:0.99:183,0,1
chr10	68428244	.	ATTTTTTG	A	6259.84	PASS	AB=0.805;AC=38;AF=0.679;AN=56;BaseQRankSum=10.381;DP=405;FS=0.515;HRun=0;HaplotypeScore=88.8693;InbreedingCoeff=0.6978;MQ=60.82;MQ0=1;MQRankSum=-7.445;QD=22.60;ReadPosRankSum=0.473;VQSLOD=4.3666;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:69.10:0,69,2041	1/1:3,4:7:8.95:154,9,0	0/0:13,0:10:9.92:0,10,315	0/1:17,0:10:20.57:21,0,190	0/0:17,0:17:33.09:0,33,1013	1/1:1,14:15:24.08:548,24,0	1/1:4,7:11:18.06:407,18,0	1/1:13,11:24:32.97:479,33,0	1/1:3,9:12:15.05:343,15,0	0/0:14,0:14:36.08:0,36,1181	0/0:24,0:24:60.18:0,60,1943	1/1:3,9:12:18.06:411,18,0	0/0:8,0:8:24.08:0,24,871	1/1:4,6:10:12.04:274,12,0	1/1:4,9:13:15.05:343,15,0	1/1:5,8:13:5.60:136,6,0	1/1:9,10:19:15.05:343,15,0	1/1:11,6:16:26.68:455,27,0	1/1:9,8:17:7.65:338,8,0	1/1:3,11:15:31.21:553,31,0	1/1:6,8:14:6.02:137,6,0	1/1:1,3:4:3.01:66,3,0	0/0:10,0:10:30.10:0,30,1107	0/0:11,0:11:24.08:0,24,867	1/1:4,10:14:6.02:137,6,0	0/1:9,16:24:33.75:726,0,34	1/1:4,12:16:14.69:343,15,0	1/1:2,0:2:3.01:45,3,0
chr10	68428465	.	C	CTTT	6914.89	PASS	AB=0.752;AC=35;AF=0.625;AN=56;BaseQRankSum=-2.054;DP=539;FS=0.870;HRun=12;HaplotypeScore=82.9632;InbreedingCoeff=0.7371;MQ=69.38;MQ0=2;MQRankSum=-7.065;QD=21.41;ReadPosRankSum=-1.475;VQSLOD=3.5446;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:32:72.79:0,73,776	1/1:1,7:9:12:173,12,0	0/1:28,0:21:6.06:6,0,60	0/0:17,0:10:2.58:0,3,25	0/0:30,0:33:58.41:0,58,671	1/1:3,16:23:39.09:626,39,0	1/1:2,9:15:36.03:566,36,0	0/0:29,0:30:46.87:0,47,641	1/1:4,3:10:18.02:253,18,0	0/0:20,0:21:50.95:0,51,549	0/0:23,0:27:41.84:0,42,483	1/1:1,7:8:6.02:102,6,0	0/0:14,0:14:32.79:0,33,338	1/1:2,10:13:24.01:372,24,0	1/1:3,8:14:17.71:262,18,0	1/1:3,12:16:27.09:483,27,0	1/1:4,21:30:39.03:542,39,0	0/1:4,0:17:16.34:17,0,16	1/1:9,8:18:29.78:364,30,0	1/1:2,14:19:39.07:565,39,0	1/1:7,11:19:15.03:238,15,0	1/1:4,6:10:18.06:295,18,0	0/0:24,0:25:56.99:0,57,612	0/0:17,0:17:41.67:0,42,433	1/1:5,12:17:30.10:529,30,0	0/1:11,2:20:40.24:243,0,40	1/1:6,15:22:39.11:664,39,0	1/1:1,11:14:36.10:613,36,0
chr10	68428587	.	TCGTTTAA	T	12104.50	PASS	AB=0.533;AC=35;AF=0.625;AN=56;BaseQRankSum=13.072;DP=429;FS=3.367;HRun=0;HaplotypeScore=111.7242;InbreedingCoeff=0.8707;MQ=93.62;MQ0=1;MQRankSum=-14.665;QD=61.44;ReadPosRankSum=3.421;VQSLOD=5.1290;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,108,4299	1/1:0,3:3:9.03:242,9,0	0/0:25,0:25:75.22:0,75,2715	0/0:21,0:21:60.21:0,60,2416	0/0:26,0:26:75.26:0,75,2912	1/1:2,15:17:42.14:1123,42,0	1/1:2,7:9:18.06:483,18,0	1/1:4,14:18:39.10:873,39,0	1/1:1,8:9:18.06:485,18,0	0/0:24,0:24:66.23:0,66,2566	0/0:23,0:23:69.24:0,69,2732	1/1:0,17:17:51.18:1371,51,0	0/0:17,0:17:51.18:0,51,1981	1/1:1,10:11:24.08:643,24,0	1/1:1,11:12:33.11:887,33,0	1/1:0,9:9:27.09:719,27,0	1/1:1,11:12:30.10:806,30,0	0/0:13,0:13:33.11:0,33,1227	1/1:0,8:7:21.03:505,21,0	1/1:4,8:12:18.06:483,18,0	1/1:1,6:7:2.92:71,3,0	1/1:1,9:10:24.08:646,24,0	0/0:23,0:23:69.24:0,69,2726	0/0:20,0:20:60.21:0,60,2376	1/1:1,9:10:24.08:646,24,0	0/1:2,14:16:79.88:993,0,80	1/1:2,11:13:36.12:966,36,0	1/1:0,3:3:6.02:162,6,0
chr10	68428642	.	CGTGT	C	195.83	PASS	AB=1.000;AC=3;AF=0.068;AN=44;BaseQRankSum=2.735;DP=525;FS=3.959;HRun=0;HaplotypeScore=123.7058;InbreedingCoeff=0.3853;MQ=63.38;MQ0=10;MQRankSum=0.438;QD=6.99;ReadPosRankSum=2.532;VQSLOD=2.5652;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:36:26.83:0,27,581	./.	./.	0/0:39,0:23:6.91:0,7,80	0/0:27,0:27:39.07:0,39,674	0/0:25,0:25:6.02:0,6,107	0/0:23,0:22:3.01:0,3,67	0/0:24,0:23:12.93:0,13,210	0/0:12,0:12:6.02:0,6,108	0/0:18,0:18:9.88:0,10,114	0/0:17,0:14:3.01:0,3,59	0/0:17,0:17:2.94:0,3,18	0/0:17,0:16:21.02:0,21,371	./.	0/0:13,0:11:3.01:0,3,65	0/0:15,0:15:2.97:0,3,53	0/0:18,0:17:10.18:0,10,99	1/1:4,8:12:18.06:283,18,0	0/0:16,0:15:21.07:0,21,396	./.	./.	0/1:16,0:15:0:0,0,0	0/0:17,0:17:18.03:0,18,328	0/0:23,0:24:38.84:0,39,746	0/0:14,0:14:6.02:0,6,106	0/0:21,0:20:39.13:0,39,684	0/0:21,0:21:36.18:0,36,616	./.
chr10	68428821	.	C	CT	16372.43	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=1.297;DP=614;FS=7.925;HRun=2;HaplotypeScore=80.1607;InbreedingCoeff=0.9993;MQ=79.46;MQ0=0;MQRankSum=-1.946;QD=37.47;ReadPosRankSum=0.558;VQSLOD=5.1565;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,129,1554	1/1:0,12:12:27.09:389,27,0	0/0:22,0:22:51.10:0,51,592	0/0:11,0:11:33.07:0,33,359	0/0:32,0:32:90.25:0,90,1088	1/1:0,25:25:63.14:875,63,0	1/1:0,24:24:63.21:907,63,0	1/1:1,24:25:72.20:1014,72,0	1/1:0,17:17:45.15:648,45,0	1/1:1,27:28:81.27:1167,81,0	1/1:1,26:27:78.26:1123,78,0	1/1:0,14:14:36.12:512,36,0	0/0:21,0:21:60.19:0,60,742	1/1:1,27:28:75.03:1002,75,0	1/1:2,17:19:48.09:665,48,0	1/1:0,21:21:57.12:795,57,0	1/1:0,23:23:60.20:864,60,0	1/1:1,13:14:33.11:475,33,0	1/1:2,11:13:33.11:475,33,0	1/1:1,18:19:48.08:645,48,0	1/1:1,33:34:93.31:1339,93,0	1/1:1,17:19:50.96:632,51,0	0/0:25,0:25:71.96:0,72,867	0/0:20,0:20:54.16:0,54,656	1/1:0,13:13:39.06:536,39,0	1/1:0,22:22:66.20:928,66,0	1/1:1,28:29:72.24:1036,72,0	1/1:3,8:11:24.08:345,24,0
chr10	68430018	.	AG	A	283.47	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.178;DP=667;FS=2.967;HRun=1;HaplotypeScore=65.8074;InbreedingCoeff=0.9969;MQ=88.11;MQ0=1;MQRankSum=-2.127;QD=31.50;ReadPosRankSum=0.938;VQSLOD=3.3682;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,108,1698	0/0:9,0:9:27.09:0,27,432	0/0:22,0:22:66.23:0,66,1055	0/0:26,0:26:66.15:0,66,967	0/0:19,0:19:57.19:0,57,911	0/0:20,0:20:57.16:0,57,862	0/0:16,0:16:48.15:0,48,743	0/0:30,0:30:90.30:0,90,1418	0/0:28,0:28:78.27:0,78,1244	0/0:27,0:27:81.22:0,81,1266	0/0:25,0:25:75.26:0,75,1199	0/0:19,0:19:57.18:0,57,887	0/0:28,0:28:84.29:0,84,1342	0/0:30,0:30:90.29:0,90,1414	0/0:35,0:35:99:0,102,1574	0/0:29,0:29:87.27:0,87,1343	0/0:23,0:23:66.22:0,66,1051	1/1:0,9:9:27.09:378,27,0	0/0:15,0:15:42.14:0,42,672	0/0:18,0:18:51.16:0,51,792	0/0:43,0:42:99:0,126,1984	0/0:22,0:22:63.20:0,63,983	0/0:22,0:22:66.23:0,66,1053	0/0:23,0:23:69.22:0,69,1079	0/0:20,0:20:60.19:0,60,935	0/0:31,0:31:93.32:0,93,1484	0/0:33,0:33:90.30:0,90,1433	0/0:9,0:9:27.07:0,27,402
chr10	68430107	.	GA	G	16872.85	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=14.443;DP=711;FS=11.485;HRun=2;HaplotypeScore=70.7061;InbreedingCoeff=0.9990;MQ=71.95;MQ0=0;MQRankSum=-2.638;QD=36.13;ReadPosRankSum=3.260;VQSLOD=4.7686;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:69.22:0,69,1013	1/1:1,7:8:21.07:273,21,0	0/0:22,0:22:52.02:0,52,806	0/0:22,0:22:62.81:0,63,859	0/0:34,0:34:99:0,102,1509	1/1:0,16:16:48.16:623,48,0	1/1:1,16:17:35.72:536,36,0	1/1:0,39:39:99:1463,114,0	1/1:0,32:32:90.29:1169,90,0	0/0:42,0:42:99:0,126,1866	0/0:22,0:22:66.21:0,66,969	1/1:0,24:24:72.23:935,72,0	0/0:25,0:25:72.24:0,72,1074	1/1:1,23:24:69.22:896,69,0	1/1:0,41:41:99:1519,117,0	1/1:0,28:28:81.26:1052,81,0	1/1:1,19:20:54.18:701,54,0	1/1:0,11:11:33.11:428,33,0	1/1:0,14:13:36.12:466,36,0	1/1:0,27:27:75.24:974,75,0	1/1:1,32:33:93.30:1208,93,0	1/1:0,31:31:81.26:1052,81,0	0/0:33,0:33:96.31:0,96,1415	0/0:20,0:20:60.20:0,60,899	1/1:0,23:23:69.22:896,69,0	1/1:1,22:23:24.24:812,24,0	1/1:2,40:42:99:1324,102,0	1/1:0,14:14:42.14:545,42,0
chr10	68430796	.	TGG	T	1091.13	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.605;DP=690;FS=2.553;HRun=3;HaplotypeScore=120.8389;InbreedingCoeff=0.9998;MQ=81.56;MQ0=0;MQRankSum=-4.989;QD=38.97;ReadPosRankSum=-4.193;VQSLOD=2.1702;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,117,2252	0/0:13,0:13:39.13:0,39,752	0/0:24,0:24:64.22:0,64,1102	0/0:14,0:15:38.96:0,39,660	0/0:26,0:26:78.27:0,78,1491	0/0:25,0:25:75.26:0,75,1439	0/0:13,0:13:39.13:0,39,737	1/1:2,26:28:78.26:1186,78,0	0/0:28,0:28:84.28:0,84,1585	0/0:29,0:29:84.29:0,84,1616	0/0:14,0:14:42.13:0,42,771	0/0:22,0:22:66.21:0,66,1195	0/0:28,0:28:84.29:0,84,1612	0/0:23,0:23:69.24:0,69,1333	0/0:35,0:35:99:0,102,1928	0/0:34,0:34:99:0,102,1930	0/0:24,0:24:72.25:0,72,1391	0/0:15,0:15:45.12:0,45,832	0/0:24,0:24:72.24:0,72,1324	0/0:33,0:33:99:0,99,1872	0/0:26,0:26:78.27:0,78,1491	0/0:31,0:31:93.32:0,93,1770	0/0:19,0:19:57.20:0,57,1100	0/0:24,0:24:72.25:0,72,1384	0/0:28,0:28:81.28:0,81,1560	0/0:23,0:23:69.24:0,69,1293	0/0:29,0:29:87.30:0,87,1675	0/0:16,0:16:48.16:0,48,907
chr10	68431246	.	AT	A	14226.54	PASS	AB=1.000;AC=37;AF=0.661;AN=56;BaseQRankSum=12.656;DP=603;FS=0.703;HRun=1;HaplotypeScore=71.0248;InbreedingCoeff=0.9080;MQ=64.75;MQ0=2;MQRankSum=2.938;QD=35.48;ReadPosRankSum=1.714;VQSLOD=5.0439;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:84.18:0,84,1225	1/1:0,7:7:21.07:294,21,0	0/1:18,0:12:2.22:2,0,319	0/0:20,0:13:16.55:0,17,315	0/0:36,0:36:99:0,102,1573	1/1:0,21:21:60.20:839,60,0	1/1:0,23:23:57.15:775,57,0	1/1:0,31:31:90.28:1211,90,0	1/1:0,16:16:42.14:587,42,0	0/0:19,0:19:57.17:0,57,815	0/0:21,0:21:60.19:0,60,916	1/1:0,16:16:45.15:629,45,0	0/0:23,0:23:69.19:0,69,1009	1/1:0,25:25:60.20:839,60,0	1/1:0,17:17:39.09:523,39,0	1/1:0,23:23:69.23:965,69,0	1/1:1,27:28:74.61:1013,75,0	0/0:16,1:15:0.10:0,0,509	1/1:2,26:26:63.16:847,63,0	1/1:0,31:31:90.27:1237,90,0	1/1:1,17:17:42.14:587,42,0	1/1:0,10:10:30.10:419,30,0	0/0:21,0:21:54.18:0,54,841	0/0:15,0:15:39.13:0,39,610	1/1:0,26:26:72.24:1007,72,0	1/1:0,24:24:69.21:942,69,0	1/1:1,27:27:75.25:1049,75,0	1/1:0,11:11:33.11:461,33,0
chr10	68432370	.	CAT	C	4454.73	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=8.991;DP=469;FS=7.206;HRun=0;HaplotypeScore=65.0587;InbreedingCoeff=0.8014;MQ=69.39;MQ0=0;MQRankSum=-0.129;QD=14.32;ReadPosRankSum=3.603;VQSLOD=3.5998;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:64.44:0,64,809	1/1:0,5:5:5.13:58,5,0	0/0:25,0:9:3.16:0,3,130	0/0:9,0:7:10.81:0,11,124	0/0:21,0:21:60.82:0,61,639	1/1:0,14:16:14.98:174,15,0	1/1:5,2:16:3.96:189,4,0	1/1:0,4:22:37.15:478,37,0	1/1:0,10:13:8.39:113,8,0	0/0:18,0:18:51.07:0,51,667	0/0:12,0:12:24.95:0,25,267	1/1:10,4:17:34.29:388,34,0	0/0:19,0:19:32.79:0,33,259	1/1:1,12:14:1.21:42,1,0	1/1:1,25:29:8.26:104,8,0	1/1:0,14:15:9.03:121,9,0	1/1:0,1:7:5.77:75,6,0	1/1:0,7:10:11.93:119,12,0	1/1:2,11:15:38.66:360,39,0	1/1:12,5:20:6.71:354,7,0	1/1:0,13:15:5.63:62,6,0	1/1:0,21:20:38.10:316,38,0	0/0:11,0:11:28.73:0,29,375	0/0:13,0:13:29.95:0,30,279	1/1:2,18:22:12.18:227,12,0	1/1:1,4:23:46.72:600,47,0	1/1:13,2:22:52.37:515,52,0	1/1:0,7:9:12:158,12,0
chr10	68432996	.	AC	A	377.78	PASS	AC=26;AF=1.000;AN=26;BaseQRankSum=-2.341;DP=109;FS=0.000;HRun=2;HaplotypeScore=33.8717;InbreedingCoeff=-0.1483;MQ=16.05;MQ0=71;MQRankSum=0.514;QD=7.26;ReadPosRankSum=2.227;VQSLOD=0.8788;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	./.	1/1:0,1:1:2.98:22,3,0	./.	1/1:1,5:4:8.99:75,9,0	1/1:6,1:2:2.98:22,3,0	1/1:1,2:3:5.99:49,6,0	1/1:2,1:1:2.97:20,3,0	1/1:3,1:3:5.98:45,6,0	./.	1/1:0,1:1:2.98:22,3,0	1/1:2,2:2:5.97:44,6,0	./.	1/1:2,2:2:2.98:21,3,0	./.	1/1:3,1:2:3:27,3,0	./.	./.	1/1:3,1:1:2.98:22,3,0	./.	./.	1/1:2,2:2:5.97:44,6,0	./.	1/1:5,2:5:1.46:38,1,0	./.
chr10	68432999	.	TA	T	439.01	PASS	AC=26;AF=1.000;AN=26;DP=104;FS=0.000;HRun=1;HaplotypeScore=16.6495;InbreedingCoeff=-0.1426;MQ=14.11;MQ0=74;QD=9.34;VQSLOD=0.8114;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	./.	1/1:0,1:1:3:25,3,0	./.	1/1:1,5:4:9.01:84,9,0	1/1:6,1:1:3:25,3,0	1/1:0,2:2:5.99:49,6,0	1/1:2,1:1:2.97:20,3,0	1/1:1,2:2:6:54,6,0	./.	1/1:0,1:1:3:25,3,0	1/1:2,2:2:5.99:50,6,0	./.	1/1:3,2:2:2.99:24,3,0	./.	1/1:2,1:1:3:29,3,0	./.	./.	1/1:3,1:1:3:25,3,0	./.	./.	1/1:2,2:2:5.99:50,6,0	./.	1/1:2,2:2:6:52,6,0	./.
chr10	68433516	.	T	TA	1216.04	PASS	AB=1.000;AC=29;AF=0.967;AN=30;DP=169;FS=0.000;HRun=0;HaplotypeScore=11.4197;InbreedingCoeff=0.0400;MQ=30.42;MQ0=132;QD=12.54;VQSLOD=3.6007;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,2:1:3.01:44,3,0	./.	./.	0/1:7,0:2:0:0,0,0	1/1:11,3:3:5.51:84,6,0	1/1:4,2:2:6.02:88,6,0	1/1:4,2:2:6.02:87,6,0	./.	./.	1/1:5,3:3:9.03:143,9,0	1/1:2,3:3:3.01:45,3,0	1/1:6,2:2:6.02:87,6,0	1/1:3,2:2:6.02:90,6,0	./.	1/1:2,3:3:9.03:130,9,0	1/1:4,4:4:12.04:175,12,0	./.	./.	./.	1/1:3,1:1:3.01:44,3,0	./.	1/1:3,2:2:6.02:85,6,0	./.	./.	./.	1/1:2,3:3:9.03:143,9,0	1/1:2,1:1:3.01:43,3,0	./.
chr10	68433622	.	AG	A	11125.75	PASS	AB=0.667;AC=51;AF=0.911;AN=56;BaseQRankSum=-1.626;DP=475;FS=15.082;HRun=2;HaplotypeScore=98.2220;InbreedingCoeff=0.6006;MQ=37.85;MQ0=92;MQRankSum=-3.079;QD=27.34;ReadPosRankSum=1.009;VQSLOD=3.3482;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,21:21:42.14:587,42,0	1/1:1,7:7:18.06:246,18,0	0/0:24,0:2:3.01:0,3,48	0/0:44,0:2:6.02:0,6,95	1/1:1,13:12:27.09:374,27,0	1/1:2,21:21:51.17:712,51,0	1/1:2,7:6:15.05:209,15,0	1/1:7,18:19:51.17:708,51,0	1/1:1,19:18:51.17:712,51,0	1/1:2,13:12:36.12:503,36,0	1/1:2,17:18:39.13:541,39,0	1/1:4,15:14:30.10:414,30,0	1/1:0,12:11:24.08:335,24,0	1/1:3,12:10:27.09:377,27,0	1/1:2,22:22:57.19:796,57,0	1/1:1,10:10:24.08:335,24,0	1/1:2,12:12:30.10:414,30,0	0/1:7,7:9:10.99:266,0,11	1/1:2,5:5:15.05:207,15,0	1/1:2,19:18:48.16:669,48,0	1/1:10,4:4:9.03:126,9,0	1/1:3,10:10:24.08:335,24,0	1/1:2,14:14:21.07:293,21,0	1/1:5,15:16:36.10:467,36,0	1/1:3,12:11:24.08:335,24,0	1/1:1,8:8:24.08:335,24,0	1/1:0,16:16:42.14:579,42,0	1/1:3,8:8:18.06:251,18,0
chr10	68433719	.	TC	T	2066.17	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.434;DP=637;FS=2.455;HRun=1;HaplotypeScore=87.8268;InbreedingCoeff=0.9886;MQ=75.65;MQ0=0;MQRankSum=-0.717;QD=37.57;ReadPosRankSum=-0.005;VQSLOD=3.8544;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,105,1648	0/0:6,0:6:15.05:0,15,239	0/0:15,0:15:38.73:0,39,570	0/0:21,0:21:63:0,63,891	0/0:33,0:33:99:0,99,1578	0/0:26,0:26:66.23:0,66,1053	0/0:20,0:20:57.19:0,57,910	0/0:34,0:34:99:0,99,1512	0/0:24,0:24:63.21:0,63,1005	1/1:0,31:31:93.30:1280,93,0	1/1:0,24:23:66.22:908,66,0	0/0:25,0:24:72.25:0,72,1145	0/0:24,0:23:60.20:0,60,958	0/0:17,0:16:48.15:0,48,737	0/0:35,0:34:99:0,99,1580	0/0:21,0:21:60.20:0,60,957	0/0:29,0:29:84.27:0,84,1316	0/0:14,0:14:39.12:0,39,595	0/0:16,0:16:48.16:0,48,767	0/0:23,0:23:66.22:0,66,1045	0/0:21,0:21:60.20:0,60,957	0/0:18,0:18:48.16:0,48,756	0/0:24,0:24:72.25:0,72,1148	0/0:18,0:17:42.14:0,42,668	0/0:28,0:27:81.28:0,81,1293	0/0:16,1:17:23.68:0,24,740	0/0:29,0:29:84.29:0,84,1329	0/0:8,0:8:21.07:0,21,336
chr10	68434471	.	C	CAAAA	778.79	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=4.505;DP=572;FS=2.089;HRun=8;HaplotypeScore=183.3514;InbreedingCoeff=0.7035;MQ=61.60;MQ0=7;MQRankSum=-5.569;QD=18.99;ReadPosRankSum=-2.179;VQSLOD=-0.5483;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:84.21:0,84,1246	0/0:3,0:3:9.03:0,9,136	0/0:47,0:30:51.63:0,52,664	0/0:44,0:22:19.86:0,20,275	0/0:24,0:24:57.58:0,58,987	0/0:16,0:16:24.01:0,24,363	0/0:17,0:17:36.07:0,36,535	0/0:22,0:22:44.84:0,45,646	0/0:22,0:22:23.32:0,23,362	0/0:23,0:23:51.09:0,51,750	0/0:17,0:17:42.12:0,42,635	0/0:17,0:17:35.20:0,35,543	0/0:18,0:18:51.16:0,51,772	0/0:19,0:19:31.24:0,31,464	0/0:21,0:21:32.98:0,33,499	0/0:16,0:16:26.98:0,27,385	0/0:22,0:21:38.73:0,39,590	1/1:7,9:17:39.13:873,39,0	0/0:16,0:16:21.01:0,21,318	0/0:22,0:22:39.07:0,39,586	0/0:7,0:7:15.04:0,15,227	0/0:17,0:17:27.01:0,27,407	0/0:11,0:11:27.06:0,27,407	0/0:20,0:21:51.14:0,51,750	0/0:17,0:16:24.49:0,24,364	0/0:21,0:20:45.05:0,45,655	0/1:23,0:23:1.84:2,0,333	0/0:16,0:16:38.68:0,39,533
chr10	68434489	.	C	CAA	8013.48	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=8.518;DP=589;FS=2.070;HRun=6;HaplotypeScore=166.1949;InbreedingCoeff=0.9736;MQ=64.39;MQ0=6;MQRankSum=-9.594;QD=26.19;ReadPosRankSum=-3.443;VQSLOD=2.1241;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:78.24:0,78,1123	1/1:3,2:6:11.92:132,12,0	0/0:54,0:24:54.92:0,55,703	0/0:40,0:22:41.20:0,41,492	0/0:28,0:29:77.51:0,78,1155	1/1:5,6:13:32.05:423,32,0	1/1:9,4:14:22.98:317,23,0	0/0:22,0:20:22.42:0,22,101	1/1:13,6:21:48.02:587,48,0	0/0:24,0:24:59.88:0,60,497	0/0:19,0:19:36.20:0,36,411	1/1:11,1:14:25.78:281,26,0	0/0:14,0:14:36.12:0,36,529	1/1:11,4:15:28.40:378,28,0	1/1:8,9:17:45.47:594,45,0	1/1:3,9:15:39.05:541,39,0	1/1:12,11:24:37.23:674,37,0	0/0:16,0:16:6.15:0,6,233	1/1:15,5:19:33.18:404,33,0	1/1:11,9:21:47.50:570,47,0	1/1:0,2:4:12.01:131,12,0	1/1:10,11:23:51.32:626,51,0	0/0:13,0:13:39.11:0,39,552	0/0:22,0:22:60.20:0,60,880	1/1:8,7:17:37.88:432,38,0	1/1:14,15:32:68.71:970,69,0	1/1:20,6:29:44.90:678,45,0	1/1:11,4:15:16.75:277,17,0
chr10	68434491	.	AC	A	3557.70	PASS	AB=1.000;AC=37;AF=0.661;AN=56;BaseQRankSum=9.327;DP=581;FS=4.783;HRun=1;HaplotypeScore=170.1816;InbreedingCoeff=0.9086;MQ=65.19;MQ0=7;MQRankSum=-9.862;QD=10.85;ReadPosRankSum=-3.448;VQSLOD=0.5347;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:81.17:0,81,1062	1/1:6,0:6:13.96:80,14,0	0/0:57,0:24:65.63:0,66,688	0/0:43,0:24:35.96:0,36,403	0/0:31,0:31:65.88:0,66,1105	1/1:13,0:13:29.62:149,30,0	1/1:12,0:12:23.40:131,23,0	1/1:11,11:20:50.97:462,51,0	1/1:20,0:20:41.27:190,41,0	0/0:23,0:23:64.28:0,64,397	0/0:19,0:19:15.61:0,16,269	1/1:14,0:14:20.05:171,20,0	0/0:13,0:13:36.11:0,36,501	1/1:14,0:14:32.22:170,32,0	1/1:18,0:17:44.24:233,44,0	1/1:15,0:15:37.68:186,38,0	1/1:24,0:23:31.51:176,32,0	0/1:15,0:15:32.55:33,0,60	1/1:21,0:20:34.11:183,34,0	1/1:18,0:18:40.74:191,41,0	1/1:4,0:4:11.73:71,12,0	1/1:22,0:21:28.34:156,28,0	0/0:14,0:14:39.12:0,39,544	0/0:22,0:22:63.19:0,63,848	1/1:18,0:17:44.49:269,44,0	1/1:32,0:31:68.96:332,69,0	1/1:30,0:29:45.75:242,46,0	1/1:10,0:10:24.73:134,25,0
chr10	68434492	.	C	CA	4481.75	PASS	AB=1.000;AC=39;AF=0.696;AN=56;BaseQRankSum=11.397;DP=597;FS=0.000;HRun=8;HaplotypeScore=175.9745;InbreedingCoeff=0.8631;MQ=63.69;MQ0=9;MQRankSum=-10.682;QD=12.15;ReadPosRankSum=-2.608;VQSLOD=2.0365;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:71.99:0,72,652	1/1:6,0:6:9.16:64,9,0	0/0:58,0:23:0.58:0,1,261	0/0:42,1:24:29.57:0,30,266	0/0:31,0:31:88.95:0,89,772	1/1:13,0:13:25.86:151,26,0	1/1:12,0:12:19.02:102,19,0	0/1:24,0:22:9.41:34,0,9	1/1:20,0:20:40.07:226,40,0	1/1:5,20:25:63.18:720,63,0	1/1:10,12:22:38.57:461,39,0	1/1:14,0:14:20.29:153,20,0	0/0:13,0:13:36:0,36,325	1/1:14,0:14:24.31:124,24,0	1/1:19,0:18:33.44:187,33,0	1/1:15,0:15:37.43:244,37,0	1/1:24,0:23:32.76:242,33,0	0/0:15,0:15:35.03:0,35,211	1/1:22,0:21:27.18:138,27,0	1/1:18,0:18:38.37:224,38,0	1/1:4,0:4:10.89:88,11,0	1/1:23,0:22:46.35:294,46,0	0/0:14,0:14:39.01:0,39,357	0/0:22,0:22:60.01:0,60,542	1/1:18,0:17:27.52:172,28,0	1/1:34,0:33:68.74:415,69,0	1/1:32,0:31:41.92:353,42,0	1/1:10,0:10:16.72:90,17,0
chr10	68434500	.	AC	A	2504.83	PASS	AB=1.000;AC=39;AF=0.696;AN=56;BaseQRankSum=10.630;DP=573;FS=0.761;HRun=3;HaplotypeScore=182.6572;InbreedingCoeff=0.9015;MQ=61.90;MQ0=12;MQRankSum=-10.220;QD=7.20;ReadPosRankSum=-1.311;VQSLOD=0.0985;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:81.25:0,81,1098	1/1:5,0:5:8.65:37,9,0	0/0:52,0:18:44.23:0,44,452	0/0:42,0:23:37.37:0,37,385	0/0:32,0:32:90.26:0,90,1193	1/1:14,0:14:26.87:129,27,0	1/1:9,0:10:16.11:75,16,0	1/1:16,9:24:41.53:457,42,0	1/1:18,0:18:24.99:99,25,0	1/1:25,1:25:29.53:203,30,0	1/1:21,0:21:26.94:127,27,0	1/1:10,0:10:13.40:61,13,0	0/0:15,0:15:45.01:0,45,545	1/1:12,0:12:26.26:125,26,0	1/1:16,0:15:30.10:115,30,0	1/1:14,0:14:33.58:135,34,0	1/1:21,0:20:4.83:60,5,0	0/0:16,0:16:21.81:0,22,436	1/1:22,0:21:32.30:170,32,0	1/1:17,0:17:33.30:130,33,0	1/1:4,0:4:11.44:62,11,0	1/1:23,0:22:32.42:118,32,0	0/0:16,0:16:47.50:0,48,611	0/0:21,0:21:57.19:0,57,787	1/1:16,0:15:35.31:160,35,0	1/1:30,0:31:54.85:224,55,0	1/1:31,0:31:35.19:189,35,0	0/1:9,0:8:2.66:39,0,3
chr10	68434513	.	A	AAAAC	14807.70	PASS	AB=0.732;AC=39;AF=0.696;AN=56;BaseQRankSum=12.270;DP=601;FS=0.417;HRun=0;HaplotypeScore=193.4250;InbreedingCoeff=0.9070;MQ=55.83;MQ0=13;MQRankSum=-13.550;QD=39.59;ReadPosRankSum=0.691;VQSLOD=4.6251;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:51.14:0,51,758	1/1:3,2:5:11.63:212,12,0	0/0:42,0:14:9.02:0,9,124	0/0:41,0:23:17.13:0,17,262	0/0:28,0:28:66.21:0,66,1045	1/1:11,7:19:30.04:645,30,0	1/1:9,3:13:15.04:317,15,0	0/0:30,0:28:60.16:0,60,848	1/1:15,6:21:32.89:594,33,0	1/1:12,17:28:63.20:1374,63,0	1/1:10,10:21:45.15:1016,45,0	1/1:8,2:10:29.91:532,30,0	0/0:13,0:13:24.07:0,24,366	1/1:4,6:13:27.09:542,27,0	1/1:10,5:16:27.02:575,27,0	1/1:4,8:12:27.09:644,27,0	1/1:17,3:22:21:406,21,0	1/1:13,4:17:9.23:357,9,0	0/1:19,9:27:0.70:844,0,1	1/1:9,10:20:39.81:902,40,0	1/1:3,1:4:6.02:144,6,0	1/1:10,12:21:44.96:963,45,0	0/0:20,0:20:45.10:0,45,635	0/0:20,0:20:42.14:0,42,681	1/1:8,8:18:40.30:871,40,0	1/1:17,17:36:69.16:1533,69,0	1/1:14,13:31:87.17:1849,87,0	1/1:7,5:11:27.03:488,27,0
chr10	68434561	.	CAAAAA	C	10136.31	PASS	AB=0.633;AC=35;AF=0.625;AN=56;BaseQRankSum=2.592;DP=650;FS=2.289;HRun=14;HaplotypeScore=175.9641;InbreedingCoeff=0.7666;MQ=56.47;MQ0=17;MQRankSum=-5.070;QD=29.30;ReadPosRankSum=6.315;VQSLOD=1.7032;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:23:47.65:0,48,1227	1/1:1,8:9:24.02:369,24,0	0/0:76,0:10:11.14:0,11,150	0/0:86,0:24:16.52:0,17,199	0/0:19,0:21:51.16:0,51,1107	1/1:5,13:17:33.06:547,33,0	1/1:1,14:15:36.12:593,36,0	0/1:6,0:16:26.08:26,0,69	1/1:1,19:20:38.65:646,39,0	0/0:7,0:23:49.74:0,50,272	0/0:4,0:23:55:0,55,290	1/1:3,11:14:30.06:494,30,0	0/0:10,0:11:33.10:0,33,730	0/1:4,11:15:5.23:463,0,5	1/1:4,13:17:36.07:596,36,0	1/1:5,11:16:21:347,21,0	1/1:5,19:23:53.32:850,53,0	1/1:8,4:12:20.92:272,21,0	1/1:6,16:24:7.44:581,7,0	1/1:5,14:19:21.94:579,22,0	0/1:6,4:10:25.43:44,0,25	1/1:5,20:24:27.28:748,27,0	0/0:24,0:25:72.20:0,72,1713	0/0:15,0:15:33.11:0,33,881	1/1:3,16:19:45.11:745,45,0	1/1:7,23:28:66.05:1009,66,0	1/1:6,18:24:48.04:793,48,0	1/1:5,13:18:18.05:435,18,0
chr10	68435002	.	A	AT	1242.94	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=-2.509;DP=506;FS=1.326;HRun=5;HaplotypeScore=81.8138;InbreedingCoeff=0.8024;MQ=71.61;MQ0=2;MQRankSum=0.343;QD=15.94;ReadPosRankSum=-0.338;VQSLOD=3.1637;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:66.13:0,66,699	0/0:8,0:8:21.04:0,21,218	0/0:33,0:21:23.93:0,24,332	0/1:36,0:15:5.45:5,0,119	0/0:19,0:19:42.08:0,42,451	0/0:17,0:17:36.04:0,36,378	0/0:19,0:19:17.99:0,18,193	0/0:30,0:30:72.18:0,72,773	0/0:10,0:9:20.63:0,21,214	1/1:5,17:22:54.14:692,54,0	1/1:2,17:19:51.17:671,51,0	0/0:11,0:10:24.04:0,24,250	0/0:14,0:14:27.05:0,27,285	0/0:12,0:12:26.98:0,27,290	0/0:16,0:16:28.70:0,29,342	0/0:21,0:21:30.04:0,30,322	0/0:21,0:21:48.12:0,48,516	0/0:11,0:11:15.04:0,15,161	0/0:17,0:17:45.11:0,45,483	0/0:21,0:21:57.12:0,57,600	0/0:9,0:9:18.04:0,18,192	0/0:17,0:17:48.12:0,48,516	0/0:15,0:15:36.08:0,36,387	0/0:17,0:17:38.86:0,39,418	0/0:9,0:9:21:0,21,226	0/0:19,0:18:48.12:0,48,516	0/0:22,0:22:36.02:0,36,387	0/0:10,0:10:30.08:0,30,322
chr10	68435580	.	TGGG	T	9665.44	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=6.572;DP=510;FS=12.070;HRun=13;HaplotypeScore=128.8614;InbreedingCoeff=0.9040;MQ=71.45;MQ0=1;MQRankSum=-2.378;QD=26.85;ReadPosRankSum=8.885;VQSLOD=1.7511;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:19:6.49:0,6,89	1/1:1,10:11:23.93:292,24,0	0/0:14,0:14:12.04:0,12,180	0/0:19,0:21:25.08:0,25,315	0/0:15,0:19:22.24:0,22,256	1/1:2,11:13:30.02:365,30,0	1/1:6,11:17:29.76:364,30,0	1/1:6,22:28:65.90:790,66,0	1/1:1,9:10:23.98:292,24,0	0/0:15,0:15:2.99:0,3,23	0/0:6,0:9:7.22:0,7,49	1/1:2,13:15:39.07:472,39,0	0/0:8,0:8:6.02:0,6,101	1/1:3,24:27:72.03:875,72,0	1/1:6,19:25:50.73:619,51,0	1/1:10,10:20:26.40:327,26,0	1/1:9,15:24:53.83:655,54,0	0/0:12,0:12:26.12:0,26,430	1/1:4,11:15:32.85:401,33,0	1/1:5,20:25:47.79:583,48,0	1/1:7,18:25:44.72:546,45,0	1/1:2,16:18:39.11:466,39,0	0/0:10,0:10:9.03:0,9,158	0/0:19,0:21:8.60:0,9,111	1/1:7,18:25:56.15:664,56,0	1/1:2,22:24:65.93:788,66,0	1/1:5,26:31:74.95:912,75,0	1/1:0,7:7:21.06:255,21,0
chr10	68436354	.	A	ATTTTT	23185.37	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=19.208;DP=572;FS=0.308;HRun=0;HaplotypeScore=212.4942;InbreedingCoeff=0.9974;MQ=80.79;MQ0=2;MQRankSum=-18.985;QD=72.91;ReadPosRankSum=6.017;VQSLOD=5.7018;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:75.26:0,75,1700	1/1:1,9:10:30.09:738,30,0	0/0:18,0:18:54.19:0,54,1220	0/0:27,0:27:78.23:0,78,1699	0/0:30,0:30:90.31:0,90,2043	1/1:2,18:20:54.19:1445,54,0	1/1:1,11:12:36.12:884,36,0	1/1:3,14:17:45.15:1194,45,0	1/1:4,18:22:60.19:1506,60,0	0/0:42,0:42:99:0,117,2593	0/0:23,0:23:63.22:0,63,1444	1/1:2,15:17:51.16:1261,51,0	0/0:24,0:24:69.22:0,69,1541	1/1:2,15:18:51.16:1300,51,0	1/1:2,30:32:93.25:2421,93,0	1/1:2,24:26:75.25:1972,75,0	1/1:1,11:12:36.10:826,36,0	0/0:18,0:18:54.14:0,54,1159	1/1:0,6:6:18.06:492,18,0	1/1:3,21:23:63.22:1677,63,0	1/1:2,6:8:18.06:430,18,0	1/1:2,21:22:63.22:1667,63,0	0/0:24,0:24:72.25:0,72,1652	0/0:22,0:22:66.23:0,66,1475	1/1:0,16:16:48.16:1280,48,0	1/1:0,16:16:48.16:1298,48,0	1/1:0,23:27:75.26:1975,75,0	1/1:2,9:11:33.11:817,33,0
chr10	68436355	.	G	GGATGT	30047.25	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=19.961;DP=668;FS=0.290;HRun=0;HaplotypeScore=265.0412;InbreedingCoeff=0.9964;MQ=75.38;MQ0=2;MQRankSum=-20.491;QD=72.58;ReadPosRankSum=3.391;VQSLOD=5.1873;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:75.24:0,75,1695	1/1:2,9:11:33.11:852,33,0	0/0:18,0:18:54.19:0,54,1219	0/0:27,0:27:78.22:0,78,1706	0/0:30,0:30:90.31:0,90,2056	1/1:4,18:22:66.21:1666,66,0	1/1:4,11:15:39.13:984,39,0	1/1:21,14:35:99:2547,99,0	1/1:11,18:29:84.27:2110,84,0	0/0:42,0:42:99:0,123,2704	0/0:23,0:23:69.21:0,69,1489	1/1:11,15:26:75.26:1932,75,0	0/0:23,0:23:69.24:0,69,1585	1/1:16,15:31:87.28:2191,87,0	1/1:6,30:36:99:2793,108,0	1/1:7,24:31:90.31:2351,90,0	1/1:3,11:14:39.08:901,39,0	0/0:17,0:17:51.17:0,51,1150	1/1:4,6:10:30.10:814,30,0	1/1:11,21:31:87.30:2227,87,0	1/1:7,6:13:27.09:660,27,0	1/1:6,21:26:72.25:1883,72,0	0/0:24,0:24:72.25:0,72,1675	0/0:23,0:23:66.21:0,66,1481	1/1:3,16:19:57.20:1482,57,0	1/1:4,16:20:57.09:1528,57,0	1/1:7,24:31:90.31:2351,90,0	1/1:1,9:11:13.56:774,14,0
chr10	68437525	.	T	TTGC	4108.24	PASS	AB=1.000;AC=29;AF=0.690;AN=42;BaseQRankSum=8.905;DP=197;FS=1.343;HRun=0;HaplotypeScore=54.6757;InbreedingCoeff=0.6903;MQ=63.46;MQ0=9;MQRankSum=-7.618;QD=50.10;ReadPosRankSum=-2.292;VQSLOD=4.7999;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:90.31:0,90,1677	./.	0/0:26,0:3:3.48:0,3,34	0/1:16,0:9:0.44:0,0,98	0/0:26,0:26:66.23:0,66,1230	./.	1/1:1,9:10:27.09:596,27,0	1/1:0,2:2:6.02:156,6,0	1/1:0,1:1:3.01:74,3,0	1/1:0,2:3:9.03:214,9,0	1/1:0,1:1:3.01:73,3,0	1/1:0,1:1:3.01:74,3,0	0/0:7,0:7:21.07:0,21,391	1/1:0,5:5:12.04:294,12,0	1/1:0,2:2:6.02:147,6,0	./.	1/1:4,9:13:33.02:718,33,0	1/1:1,11:13:39.09:828,39,0	1/1:0,3:3:9.03:221,9,0	./.	./.	./.	0/0:18,0:17:51.17:0,51,950	0/0:5,0:5:15.05:0,15,280	1/1:0,0:1:3.01:54,3,0	1/1:0,5:7:21.05:441,21,0	1/1:0,4:4:9.03:217,9,0	./.
chr10	68437529	.	G	GCAAGC	6950.14	PASS	AC=32;AF=0.696;AN=46;BaseQRankSum=8.394;DP=240;FS=4.683;HRun=0;HaplotypeScore=72.4638;InbreedingCoeff=0.7171;MQ=58.95;MQ0=7;MQRankSum=-8.769;QD=66.83;ReadPosRankSum=-3.806;VQSLOD=4.3169;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:87.30:0,87,1973	./.	0/0:24,0:6:0.46:0,0,61	0/0:14,0:8:10.34:0,10,154	0/0:24,0:24:60.21:0,60,1397	1/1:4,1:5:3.01:95,3,0	1/1:3,9:12:30.10:926,30,0	1/1:7,2:8:15.05:497,15,0	1/1:0,1:1:3.01:100,3,0	1/1:1,3:4:12.04:396,12,0	1/1:5,1:6:3.01:99,3,0	1/1:2,1:3:6.02:199,6,0	0/0:8,0:8:21.07:0,21,489	1/1:0,5:5:12.04:397,12,0	1/1:0,2:2:6.02:199,6,0	1/1:1,0:1:3.01:48,3,0	1/1:8,6:16:42.14:1191,42,0	1/1:4,0:15:45.15:1152,45,0	1/1:3,3:6:18.06:567,18,0	./.	./.	./.	0/0:18,0:18:54.17:0,54,1188	0/0:6,0:6:18.06:0,18,389	1/1:4,1:5:3.01:99,3,0	1/1:4,5:9:21.07:693,21,0	1/1:1,4:5:9.03:291,9,0	./.
chr10	68437560	.	GA	G	251.46	PASS	AB=0.980;AC=4;AF=0.071;AN=56;BaseQRankSum=4.328;DP=378;FS=6.266;HRun=10;HaplotypeScore=60.2947;InbreedingCoeff=0.3368;MQ=60.75;MQ0=7;MQRankSum=-1.368;QD=4.26;ReadPosRankSum=0.479;VQSLOD=0.2569;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:87.22:0,87,954	0/0:4,0:4:8.98:0,9,81	0/1:23,1:12:8.85:9,0,170	0/1:19,0:16:14:14,0,120	0/0:28,0:28:78.14:0,78,844	0/0:12,1:14:10.02:0,10,323	0/0:14,0:14:32.92:0,33,346	0/0:25,1:26:43.03:0,43,666	0/0:3,0:3:3.01:0,3,33	0/0:17,0:17:45.08:0,45,484	0/0:18,0:19:41.76:0,42,400	0/0:5,0:5:15.04:0,15,166	0/0:11,0:11:27.03:0,27,285	0/0:8,0:8:18:0,18,185	0/0:4,0:4:9.02:0,9,92	0/0:8,0:8:21.52:0,22,225	0/0:23,1:24:57.14:0,57,626	1/1:3,13:16:38.99:338,39,0	0/0:9,0:10:13.40:0,13,210	0/0:14,0:14:36.10:0,36,398	0/0:3,0:3:6.02:0,6,66	0/0:4,0:4:6.02:0,6,66	0/0:12,0:12:30.08:0,30,328	0/0:13,0:13:36.10:0,36,398	0/0:11,0:11:26.97:0,27,264	0/0:15,0:15:36.03:0,36,362	0/0:9,0:9:14.97:0,15,143	0/0:8,0:7:18.05:0,18,199
chr10	68437966	.	TA	T	4520.09	PASS	AC=50;AF=1.000;AN=50;BaseQRankSum=-1.704;DP=143;FS=0.000;HRun=2;HaplotypeScore=100.4722;InbreedingCoeff=-0.0492;MQ=27.23;MQ0=15;MQRankSum=0.746;QD=33.73;ReadPosRankSum=1.648;VQSLOD=4.7586;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,5:5:15.01:175,15,0	1/1:0,3:3:9.03:116,9,0	./.	./.	1/1:0,8:8:16.58:192,17,0	1/1:0,7:7:21.07:271,21,0	1/1:0,2:2:6.02:77,6,0	1/1:5,7:7:21.07:271,21,0	1/1:0,2:2:6.02:77,6,0	1/1:0,9:9:27.09:349,27,0	1/1:0,4:4:12:133,12,0	1/1:0,3:3:9.03:116,9,0	1/1:0,3:3:9.03:116,9,0	1/1:0,7:7:21.07:271,21,0	1/1:0,7:7:21.07:270,21,0	1/1:0,2:2:6.02:77,6,0	1/1:2,3:3:9.03:116,9,0	1/1:0,4:4:12.04:155,12,0	1/1:1,1:1:3.01:39,3,0	1/1:0,8:8:23.96:256,24,0	1/1:0,3:3:8.98:86,9,0	1/1:0,3:2:6.02:77,6,0	1/1:0,4:4:12:136,12,0	1/1:0,1:1:3.01:39,3,0	1/1:0,14:14:42.14:542,42,0	1/1:0,4:4:12.04:155,12,0	1/1:0,11:11:33.05:406,33,0	./.
chr10	68437991	.	G	GT	6431.31	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=4.088;DP=207;FS=41.497;HRun=1;HaplotypeScore=126.5678;InbreedingCoeff=0.6665;MQ=43.77;MQ0=0;MQRankSum=-5.365;QD=33.50;ReadPosRankSum=2.107;VQSLOD=1.8679;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,9:10:24.04:334,24,0	1/1:0,4:4:12.04:179,12,0	0/0:7,0:7:17.41:0,17,179	0/0:8,0:7:18.05:0,18,206	1/1:1,13:14:19.23:162,19,0	1/1:1,8:9:24.08:359,24,0	1/1:1,5:6:15.01:199,15,0	1/1:3,15:19:42.14:620,42,0	1/1:2,4:6:18.06:268,18,0	1/1:0,7:7:21.07:314,21,0	1/1:0,5:5:12:154,12,0	1/1:0,3:3:9.03:134,9,0	1/1:1,5:6:15.05:224,15,0	1/1:1,7:8:21.03:289,21,0	1/1:0,7:7:18.06:269,18,0	1/1:0,2:2:6.02:90,6,0	1/1:1,7:8:18.03:245,18,0	1/1:1,5:6:15.05:224,15,0	1/1:1,4:5:15.05:218,15,0	1/1:1,8:9:26.83:254,27,0	1/1:1,6:7:6.02:90,6,0	1/1:0,3:3:8.94:85,9,0	1/1:1,5:6:14.96:174,15,0	1/1:0,3:3:3.01:45,3,0	1/1:1,12:13:39:508,39,0	1/1:1,7:8:21.07:314,21,0	1/1:1,15:16:45.11:635,45,0	1/1:1,1:2:3.01:45,3,0
chr10	68439495	.	G	GA	2133.37	PASS	AB=0.715;AC=27;AF=0.482;AN=56;BaseQRankSum=-2.630;DP=428;FS=0.485;HRun=14;HaplotypeScore=64.9935;InbreedingCoeff=0.3124;MQ=53.59;MQ0=11;MQRankSum=-0.864;QD=8.37;ReadPosRankSum=0.589;VQSLOD=2.7015;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,1:34:17.45:0,17,265	1/1:1,3:4:6:53,6,0	0/0:9,0:2:5.90:0,6,37	0/1:5,0:6:7.13:7,0,19	0/0:16,0:16:17.54:0,18,112	1/1:5,17:22:16.73:270,17,0	1/1:7,14:22:9.24:243,9,0	0/0:22,0:24:11.39:0,11,191	1/1:9,1:10:2.52:117,3,0	0/0:19,0:19:25.70:0,26,160	0/0:13,0:15:21.62:0,22,126	1/1:1,11:14:17.01:166,17,0	0/0:11,0:14:14.93:0,15,125	0/1:4,4:8:11.54:21,0,12	0/1:5,5:11:46.13:46,0,56	0/1:6,6:13:27.37:62,0,27	0/1:8,15:23:9.45:193,0,9	0/0:2,0:4:8.15:0,8,23	0/1:14,3:18:34.83:108,0,35	1/1:6,15:20:17.74:243,18,0	0/1:6,7:12:20.86:64,0,21	0/1:5,5:10:2.71:93,0,3	0/0:10,0:11:26.53:0,27,161	0/0:23,0:22:29.32:0,29,192	1/1:5,10:15:12:106,12,0	0/1:7,7:15:47.88:150,0,48	1/1:4,12:15:14.18:245,14,0	1/1:6,4:10:17.65:138,18,0
chr10	68439961	.	T	TGGTGCTGTCCACTCTCAGGTGTTGTC	2580.48	PASS	AB=0.643;AC=34;AF=0.944;AN=36;BaseQRankSum=-0.915;DP=46;FS=9.294;HRun=0;HaplotypeScore=39.8681;InbreedingCoeff=-0.1939;MQ=120.10;MQ0=0;MQRankSum=-1.647;QD=61.44;ReadPosRankSum=-0.549;VQSLOD=0.6030;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	1/1:1,0:1:3.01:72,3,0	0/1:1,1:4:25.27:619,0,25	0/1:3,0:5:15.46:398,0,15	1/1:2,0:2:6.02:131,6,0	1/1:2,0:2:6.02:199,6,0	./.	1/1:3,0:3:9.02:189,9,0	1/1:1,0:1:3:25,3,0	1/1:1,0:1:3.01:57,3,0	1/1:2,0:2:6.02:213,6,0	1/1:1,0:1:2.90:16,3,0	./.	1/1:1,0:1:3.01:59,3,0	1/1:2,0:2:3:25,3,0	./.	1/1:4,0:4:6.02:123,6,0	1/1:3,0:3:2.98:21,3,0	./.	1/1:3,0:3:6.02:147,6,0	1/1:3,0:3:9.03:218,9,0	./.	./.	./.	./.	1/1:3,0:3:6.02:122,6,0	1/1:1,0:1:3.01:38,3,0	./.
chr10	68443001	.	A	AG	11458.71	PASS	AB=0.912;AC=53;AF=0.946;AN=56;BaseQRankSum=-6.709;DP=481;FS=5.958;HRun=3;HaplotypeScore=128.3936;InbreedingCoeff=0.5826;MQ=56.69;MQ0=6;MQRankSum=-6.069;QD=25.58;ReadPosRankSum=4.157;VQSLOD=3.8797;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,15:23:56.30:636,56,0	1/1:1,7:8:18.05:210,18,0	0/1:26,3:19:44.51:45,0,257	0/0:33,0:20:27.66:0,28,338	1/1:6,18:24:47.48:422,47,0	1/1:2,11:13:36.11:442,36,0	1/1:9,5:14:24.01:288,24,0	1/1:12,17:29:60.15:721,60,0	1/1:6,20:26:58.82:733,59,0	1/1:4,9:13:30.10:405,30,0	1/1:6,8:14:26.98:289,27,0	1/1:5,7:12:21.06:245,21,0	1/1:2,13:15:38.93:429,39,0	1/1:4,10:14:38.79:400,39,0	1/1:4,13:17:36.11:430,36,0	1/1:2,9:11:27.06:307,27,0	1/1:6,7:13:33.10:417,33,0	1/1:1,5:6:15.05:207,15,0	1/1:5,9:14:34.31:415,34,0	1/1:13,13:26:71.89:814,72,0	1/1:8,6:13:32.91:380,33,0	1/1:4,10:14:35.96:402,36,0	1/1:4,11:15:41.72:391,42,0	1/1:7,9:16:30.09:360,30,0	1/1:2,9:11:5.49:302,5,0	1/1:5,14:19:54.11:681,54,0	1/1:4,22:26:66.06:803,66,0	1/1:7,3:10:23.33:283,23,0
chr10	68443009	.	AG	A	11571.90	PASS	AB=0.844;AC=54;AF=0.964;AN=56;BaseQRankSum=-6.250;DP=469;FS=0.000;HRun=3;HaplotypeScore=119.5525;InbreedingCoeff=-0.0381;MQ=58.48;MQ0=5;MQRankSum=-4.526;QD=24.67;ReadPosRankSum=1.414;VQSLOD=4.1723;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,13:22:49.37:526,49,0	1/1:0,8:8:21.04:218,21,0	0/1:20,8:20:99:214,0,126	0/1:31,2:22:71.17:71,0,131	1/1:6,19:25:58.99:610,59,0	1/1:2,11:13:33.08:353,33,0	1/1:5,7:12:24.01:261,24,0	1/1:3,23:26:66.13:733,66,0	1/1:7,18:25:61.50:638,61,0	1/1:3,9:12:33.09:386,33,0	1/1:4,8:12:33.07:366,33,0	1/1:3,7:10:21.04:217,21,0	1/1:1,11:12:32.43:315,32,0	1/1:6,9:15:41.41:402,41,0	1/1:1,12:13:33.07:341,33,0	1/1:0,12:12:36.03:378,36,0	1/1:7,7:14:36.06:375,36,0	1/1:4,4:8:18.02:193,18,0	1/1:5,8:13:27.05:297,27,0	1/1:12,16:28:84.23:974,84,0	1/1:9,6:14:36.11:436,36,0	1/1:4,9:13:36.08:387,36,0	1/1:5,11:16:42.11:485,42,0	1/1:7,7:14:27.05:275,27,0	1/1:1,9:10:30.08:335,30,0	1/1:3,17:20:60.16:692,60,0	1/1:6,21:27:75.13:809,75,0	1/1:5,5:10:19.92:282,20,0
chr10	68443488	.	CTT	C	6465.42	PASS	AB=1.000;AC=39;AF=0.696;AN=56;BaseQRankSum=2.046;DP=543;FS=0.854;HRun=11;HaplotypeScore=70.4138;InbreedingCoeff=0.8887;MQ=67.13;MQ0=6;MQRankSum=1.591;QD=18.74;ReadPosRankSum=1.530;VQSLOD=3.9798;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,123,1691	1/1:1,8:9:12.03:128,12,0	0/0:20,0:16:20.55:0,21,262	0/0:25,0:11:10.62:0,11,106	0/0:31,0:33:87.23:0,87,1247	1/1:1,24:25:51.12:543,51,0	1/1:2,12:14:21.05:223,21,0	1/1:12,16:28:23.46:453,23,0	1/1:2,8:10:15.03:160,15,0	0/1:7,0:16:18.36:18,0,116	0/0:8,0:32:48.33:0,48,431	1/1:1,10:11:15.03:160,15,0	0/0:13,0:13:39.11:0,39,558	1/1:0,8:8:21.05:223,21,0	1/1:3,14:16:36.06:383,36,0	1/1:1,15:16:42.10:447,42,0	1/1:4,22:25:48.12:511,48,0	1/1:5,24:29:31.14:518,31,0	1/1:2,7:9:21.04:216,21,0	1/1:7,18:25:48:493,48,0	1/1:0,10:10:15.04:160,15,0	1/1:2,9:10:21.03:224,21,0	0/0:14,0:17:36.09:0,36,480	0/0:12,0:13:39.13:0,39,583	1/1:6,12:19:23.76:235,24,0	1/1:2,19:21:57.12:604,57,0	1/1:3,32:35:60.15:639,60,0	1/1:0,5:5:12.03:128,12,0
chr10	68444418	.	G	GT	2388.19	PASS	AB=0.795;AC=34;AF=0.607;AN=56;BaseQRankSum=-6.967;DP=421;FS=3.841;HRun=14;HaplotypeScore=50.6880;InbreedingCoeff=0.5654;MQ=80.59;MQ0=5;MQRankSum=0.926;QD=8.68;ReadPosRankSum=1.435;VQSLOD=2.6266;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,1:22:11.38:0,11,188	1/1:2,3:6:8.84:67,9,0	0/0:23,0:15:9.16:0,9,56	0/1:22,0:15:6.60:12,0,7	0/1:21,3:24:12.76:13,0,175	1/1:3,13:16:6.28:169,6,0	1/1:6,8:14:11:114,11,0	0/0:12,0:24:16.27:0,16,55	1/1:2,9:11:4.73:165,5,0	0/0:10,0:26:27.75:0,28,82	0/0:5,0:11:12.75:0,13,40	1/1:8,3:11:21.60:207,22,0	0/0:10,0:10:16.75:0,17,102	1/1:7,2:7:2.59:26,3,0	1/1:0,11:11:21:184,21,0	0/1:7,6:13:3.77:100,0,4	1/1:6,8:14:10.67:209,11,0	0/0:0,0:14:22.40:0,22,65	1/1:9,11:19:13.68:235,14,0	1/1:5,14:20:29.04:341,29,0	0/1:5,9:14:4.26:91,0,4	1/1:3,4:7:3:27,3,0	0/0:9,0:9:20.60:0,21,130	0/0:6,0:6:8.85:0,9,58	1/1:6,9:16:6.33:157,6,0	1/1:4,10:15:3.31:134,3,0	1/1:7,13:22:3.08:237,3,0	1/1:4,4:8:11.84:93,12,0
chr10	68445009	.	GATTT	G	7777.02	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=9.931;DP=532;FS=20.884;HRun=0;HaplotypeScore=126.0759;InbreedingCoeff=0.9300;MQ=60.43;MQ0=0;MQRankSum=-10.557;QD=19.89;ReadPosRankSum=-1.277;VQSLOD=2.8023;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:47.92:0,48,881	1/1:1,8:9:21.07:302,21,0	0/0:8,0:8:3.01:0,3,73	0/0:8,0:8:6.02:0,6,86	0/0:25,0:25:51.14:0,51,1088	1/1:8,23:31:36.12:540,36,0	1/1:10,3:13:23.88:221,24,0	1/1:32,0:32:50.58:409,51,0	1/1:6,12:18:18.06:277,18,0	0/0:10,0:18:27.06:0,27,403	0/0:9,0:16:24.08:0,24,405	1/1:6,15:21:21.07:316,21,0	0/0:16,0:16:30.09:0,30,655	1/1:10,12:22:47.41:614,47,0	1/1:7,15:22:36.12:526,36,0	1/1:5,20:25:42.13:585,42,0	1/1:9,13:22:12.04:196,12,0	1/1:7,0:7:8.89:59,9,0	1/1:8,10:18:29.89:378,30,0	1/1:5,24:29:63.13:765,63,0	1/1:9,3:12:11.72:90,12,0	1/1:4,12:16:23.99:272,24,0	0/0:18,0:18:39.07:0,39,751	0/0:10,0:10:18.04:0,18,363	1/1:2,24:26:45.14:629,45,0	1/1:8,20:28:57.04:787,57,0	1/1:6,18:24:36.12:557,36,0	1/1:4,12:16:18.06:254,18,0
chr10	68445777	.	A	AAT	5588.39	PASS	AB=0.554;AC=29;AF=0.518;AN=56;BaseQRankSum=10.947;DP=569;FS=1.051;HRun=0;HaplotypeScore=95.3595;InbreedingCoeff=0.2237;MQ=79.99;MQ0=1;MQRankSum=-1.458;QD=13.37;ReadPosRankSum=7.002;VQSLOD=4.3929;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:51.16:0,51,811	0/1:2,0:15:20.63:165,0,21	0/0:17,0:18:45.77:0,46,554	0/0:13,0:14:42.09:0,42,582	0/0:25,0:25:75.22:0,75,1141	0/1:3,0:19:20.75:270,0,21	1/1:1,0:21:22.77:287,23,0	0/1:6,0:30:23.80:367,0,24	0/1:2,0:14:14.18:187,0,14	1/1:1,0:30:57.14:551,57,0	1/1:2,1:20:23.99:300,24,0	0/1:4,0:21:41.53:245,0,42	0/0:25,0:25:75.18:0,75,1111	1/1:3,0:23:17.57:342,18,0	1/1:1,0:21:13.16:240,13,0	0/1:4,0:17:38.43:211,0,38	1/1:1,0:10:2.78:132,3,0	0/0:4,0:14:27.40:0,27,141	0/1:7,0:25:91.28:282,0,91	0/1:2,0:16:1.05:241,0,1	0/1:4,0:12:53.37:81,0,53	0/1:4,0:31:8.27:377,0,8	0/0:20,0:20:60.19:0,60,945	0/0:16,0:17:51.13:0,51,747	1/1:1,0:27:43.68:451,44,0	0/1:6,0:30:24.62:386,0,25	1/1:2,0:30:28.86:386,29,0	1/1:0,0:5:11.92:87,12,0
chr10	68446866	.	C	CT	1283.58	PASS	AB=0.945;AC=43;AF=0.768;AN=56;BaseQRankSum=8.267;DP=510;FS=11.674;HRun=15;HaplotypeScore=106.1056;InbreedingCoeff=0.4713;MQ=67.74;MQ0=14;MQRankSum=-6.250;QD=2.91;ReadPosRankSum=0.089;VQSLOD=-0.4328;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:30,8:37:55.18:55,0,268	1/1:6,0:6:5.55:29,6,0	0/0:31,0:18:8.30:0,8,42	0/1:27,0:14:0.72:1,0,27	0/1:27,0:29:5.31:5,0,170	1/1:16,0:16:28.46:106,28,0	1/1:14,0:13:12.66:46,13,0	0/1:31,0:31:17.93:18,0,69	1/1:9,0:9:7.79:29,8,0	1/1:24,0:24:26.65:133,27,0	1/1:10,1:21:13.04:60,13,0	1/1:8,0:8:6.75:24,7,0	0/0:10,0:9:7.73:0,8,41	1/1:13,0:13:18.26:71,18,0	1/1:20,0:18:20.76:78,21,0	1/1:8,0:7:5.19:20,5,0	1/1:29,0:27:23.17:87,23,0	0/0:5,0:13:21.05:0,21,70	1/1:30,0:30:43.29:165,43,0	1/1:20,0:20:16.65:82,17,0	1/1:7,0:7:8.23:35,8,0	1/1:10,0:10:16.86:88,17,0	0/1:16,2:18:6.52:7,0,179	0/0:15,0:15:22.08:0,22,129	1/1:15,0:15:22.26:84,22,0	1/1:27,0:26:45.07:172,45,0	1/1:14,0:13:12.88:51,13,0	1/1:6,0:5:2.50:9,2,0
chr10	68446875	.	T	TCTTTTTTC	12859.28	PASS	AB=0.537;AC=33;AF=0.589;AN=56;BaseQRankSum=-12.099;DP=515;FS=18.033;HRun=0;HaplotypeScore=108.2386;InbreedingCoeff=0.7384;MQ=63.67;MQ0=18;MQRankSum=-5.820;QD=44.65;ReadPosRankSum=5.206;VQSLOD=3.3500;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:40:97.12:0,97,1879	1/1:0,4:5:5.78:161,6,0	0/0:29,0:16:40.20:0,40,340	0/0:27,0:13:13.11:0,13,127	0/0:27,0:27:72.82:0,73,934	1/1:2,16:20:33.05:1383,33,0	1/1:0,11:12:15.05:625,15,0	0/1:9,0:28:99:292,0,350	1/1:0,8:10:9.03:377,9,0	0/0:19,0:19:53.99:0,54,411	0/0:23,0:23:37.17:0,37,291	1/1:0,7:11:9.03:361,9,0	0/0:12,0:11:33.04:0,33,419	1/1:0,10:15:21.07:879,21,0	1/1:2,13:18:24.55:1006,25,0	1/1:1,6:10:9.03:301,9,0	1/1:3,23:29:27.09:1132,27,0	0/0:14,0:14:33.07:0,33,712	1/1:3,17:24:66.49:1243,66,0	1/1:0,17:18:27.02:485,27,0	0/1:0,0:6:20.95:89,0,21	1/1:1,6:13:23.44:578,23,0	0/0:19,0:19:54.02:0,54,874	0/0:16,0:16:30.18:0,30,594	0/1:1,11:13:1.48:1025,0,1	1/1:1,21:24:63.16:2134,63,0	1/1:2,7:13:18.06:664,18,0	1/1:2,1:5:3.01:126,3,0
chr10	68447167	.	TCTCCCTCC	T	7026.58	PASS	AB=1.000;AC=41;AF=0.732;AN=56;BaseQRankSum=7.486;DP=341;FS=0.623;HRun=0;HaplotypeScore=89.5639;InbreedingCoeff=0.7419;MQ=60.37;MQ0=6;MQRankSum=-4.642;QD=27.66;ReadPosRankSum=-1.030;VQSLOD=4.2612;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:24.08:0,24,662	1/1:4,0:4:3.01:56,3,0	0/0:12,0:6:17.98:0,18,323	0/0:18,0:7:10.44:0,10,126	0/0:13,0:13:39.12:0,39,1319	1/1:14,0:14:3.01:56,3,0	0/1:18,0:17:52:105,0,52	1/1:26,0:26:69.21:1077,69,0	1/1:7,1:8:9.03:198,9,0	1/1:5,5:10:27.09:600,27,0	1/1:5,5:10:24.08:468,24,0	1/1:12,0:12:9.03:133,9,0	0/0:11,0:11:33.10:0,33,1095	1/1:11,0:11:15.05:270,15,0	1/1:11,1:12:9.03:176,9,0	1/1:3,0:3:6.02:119,6,0	1/1:9,0:9:18.04:288,18,0	1/1:15,0:15:33.09:464,33,0	1/1:22,0:20:56.92:899,57,0	1/1:13,0:13:15.05:243,15,0	1/1:1,8:9:3.01:50,3,0	1/1:3,0:2:6.02:88,6,0	0/0:9,0:9:21.07:0,21,720	0/0:14,0:13:18.01:0,18,530	1/1:12,0:11:15.05:243,15,0	1/1:17,1:18:50.21:932,50,0	1/1:16,0:16:15.05:267,15,0	1/1:8,1:9:15.05:295,15,0
chr10	68447171	.	CCTCCCTCCCTCTCT	C	2365.40	PASS	AB=0.935;AC=12;AF=0.214;AN=56;BaseQRankSum=-0.024;DP=348;FS=12.695;HRun=0;HaplotypeScore=131.2190;InbreedingCoeff=-0.0190;MQ=57.56;MQ0=8;MQRankSum=1.209;QD=15.88;ReadPosRankSum=-2.080;VQSLOD=1.5612;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:9:24.08:0,24,1110	0/0:4,0:4:2.74:0,3,12	0/0:15,0:6:17.99:0,18,477	0/0:20,0:7:12.98:0,13,233	0/0:14,0:14:42.13:0,42,2252	0/0:14,0:14:2.88:0,3,15	0/0:16,0:16:2.44:0,2,140	0/1:2,26:28:26.38:1125,0,26	1/1:7,0:7:7:33,7,0	0/1:10,0:10:0.57:259,0,1	0/1:8,0:10:8.48:175,0,8	0/0:11,0:11:8.38:0,8,53	0/0:11,0:11:33.10:0,33,1711	0/0:11,0:11:9.53:0,10,43	0/1:12,0:12:19.49:19,0,26	0/1:2,0:2:14.67:15,0,18	0/1:9,0:9:0.24:171,0,0	0/1:18,0:18:99:220,0,188	0/1:22,0:20:99:272,0,231	0/1:13,0:13:8.71:9,0,67	0/0:8,0:8:3:0,3,26	0/0:3,0:2:5.98:0,6,49	0/0:8,0:8:21.07:0,21,1090	0/0:16,0:14:18.01:0,18,860	0/0:12,0:11:13.39:0,13,68	0/1:18,0:18:38.78:211,0,39	0/0:15,0:15:8.90:0,9,59	0/0:10,0:9:1.79:0,2,59
chr10	68447173	.	TCCCTCC	T	7680.27	PASS	AB=0.563;AC=41;AF=0.732;AN=56;BaseQRankSum=6.319;DP=353;FS=1.292;HRun=0;HaplotypeScore=80.1599;InbreedingCoeff=0.7467;MQ=56.81;MQ0=9;MQRankSum=-4.527;QD=30.00;ReadPosRankSum=-0.128;VQSLOD=4.4057;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:21.10:0,21,588	1/1:0,4:4:3.01:74,3,0	0/0:14,0:6:17.78:0,18,290	0/0:22,0:7:13.53:0,14,162	0/0:16,0:16:41.74:0,42,1218	1/1:1,12:13:3.01:73,3,0	0/1:4,14:16:63.24:161,0,63	1/1:28,0:28:37.78:1027,38,0	1/1:1,6:7:9.03:218,9,0	1/1:10,0:10:19.59:489,20,0	1/1:11,0:11:22.39:309,22,0	1/1:0,10:10:9.03:163,9,0	0/0:12,0:12:33.10:0,33,916	1/1:0,11:11:15.05:349,15,0	1/1:1,11:12:9.03:185,9,0	1/1:1,1:2:6.02:147,6,0	1/1:6,3:9:18.04:268,18,0	1/1:16,0:19:34.32:568,34,0	1/1:1,21:20:60.08:1016,60,0	1/1:2,11:13:15.05:319,15,0	1/1:8,0:8:3.01:74,3,0	1/1:2,1:2:6.02:119,6,0	0/0:7,0:7:21.07:0,21,619	0/0:15,0:13:18.01:0,18,450	1/1:2,11:12:18.04:341,18,0	1/1:1,17:18:50.26:1096,50,0	1/1:1,14:15:18.05:357,18,0	1/1:2,8:9:15.05:327,15,0
chr10	68447218	.	TTTTTTTTTTTTTTTGGGC	T	394.25	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=0.183;DP=516;FS=0.819;HRun=0;HaplotypeScore=221.0298;InbreedingCoeff=0.1389;MQ=46.99;MQ0=34;MQRankSum=2.338;QD=5.48;ReadPosRankSum=-2.425;VQSLOD=2.4135;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:19:31.21:0,31,882	0/0:5,0:5:12.04:0,12,238	0/0:73,0:15:27.48:0,27,575	0/0:77,0:23:44.60:0,45,776	0/0:30,0:29:14.92:0,15,2575	0/0:18,0:18:20.34:0,20,432	0/0:12,0:9:12.02:0,12,152	0/1:27,0:24:21.50:22,0,1359	0/0:6,0:6:13.67:0,14,156	0/1:18,0:17:99:179,0,147	0/0:25,0:25:46.04:0,46,561	0/0:9,0:8:15.72:0,16,207	0/0:11,0:10:24.08:0,24,831	0/0:12,0:11:23.87:0,24,329	0/0:10,0:9:24.06:0,24,326	0/0:9,0:7:0.96:0,1,387	0/0:11,0:9:24.05:0,24,338	1/1:1,15:17:3.29:275,3,0	0/0:18,0:16:15.19:0,15,548	0/0:13,0:11:6.35:0,6,285	0/0:4,0:4:6.02:0,6,163	0/0:5,0:5:12.03:0,12,150	0/0:10,0:10:26.93:0,27,1022	0/1:10,0:10:30.07:30,0,359	0/0:15,0:15:41.19:0,41,488	0/0:21,0:20:54.33:0,54,709	0/0:16,0:15:39.44:0,39,437	0/0:13,0:10:10.60:0,11,403
chr10	68447226	.	TTTTTTTGGGC	T	6540.06	PASS	AB=1.000;AC=42;AF=0.750;AN=56;BaseQRankSum=1.802;DP=483;FS=15.523;HRun=0;HaplotypeScore=140.3953;InbreedingCoeff=-0.1545;MQ=54.67;MQ0=33;MQRankSum=0.972;QD=16.07;ReadPosRankSum=4.710;VQSLOD=2.7197;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:21,0:19:17:17,0,287	1/1:3,0:3:2.78:39,3,0	0/0:76,0:19:28.62:0,29,426	0/1:79,0:26:7.38:7,0,397	0/1:26,0:25:99:133,0,627	1/1:18,0:18:25.66:523,26,0	1/1:12,0:11:8.56:143,9,0	0/1:27,0:24:99:283,0,156	1/1:4,0:5:11.08:226,11,0	1/1:1,12:12:30.10:505,30,0	1/1:20,1:21:24.04:461,24,0	1/1:8,0:7:7.10:247,7,0	0/1:11,0:10:87.67:88,0,192	1/1:10,0:9:8.38:259,8,0	1/1:9,0:8:20.85:308,21,0	0/1:7,0:6:6.09:160,0,6	1/1:11,0:9:17.84:287,18,0	1/1:16,0:16:6.02:157,6,0	0/1:15,0:13:39.30:337,0,39	0/1:11,0:10:40.82:182,0,41	0/1:4,0:4:12.82:35,0,13	1/1:4,0:4:9.02:120,9,0	0/1:11,0:11:26.53:27,0,195	0/1:10,0:10:93.48:160,0,93	1/1:12,1:13:23.31:480,23,0	1/1:12,1:13:32.88:513,33,0	1/1:15,0:15:42.08:611,42,0	0/1:13,0:10:13.60:232,0,14
chr10	68447227	.	TTTTTTGGGC	T	7134.26	PASS	AB=0.977;AC=44;AF=0.786;AN=56;BaseQRankSum=1.718;DP=469;FS=5.378;HRun=0;HaplotypeScore=129.5858;InbreedingCoeff=-0.1022;MQ=55.20;MQ0=32;MQRankSum=1.660;QD=18.20;ReadPosRankSum=3.921;VQSLOD=3.6897;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:20:19.04:19,0,220	1/1:2,0:2:3.01:40,3,0	0/0:77,0:20:7.49:0,7,398	0/1:79,0:26:7.58:8,0,397	0/1:26,0:25:99:167,0,459	1/1:15,0:15:36.12:549,36,0	1/1:12,0:11:9.22:145,9,0	0/1:25,0:22:70.32:355,0,70	1/1:5,0:5:11.93:215,12,0	1/1:13,0:12:30.10:491,30,0	1/1:19,0:19:28.49:490,28,0	1/1:6,0:7:17.78:278,18,0	0/1:12,0:11:99:137,0,123	1/1:8,0:7:17.83:299,18,0	1/1:9,0:8:21.02:339,21,0	1/1:5,0:5:11.29:172,11,0	1/1:10,0:9:18.03:307,18,0	1/1:16,0:16:6.02:143,6,0	0/1:14,0:12:19.19:340,0,19	0/1:9,1:10:32.04:201,0,32	1/1:4,0:4:2.74:50,3,0	1/1:4,0:4:9.03:134,9,0	0/1:11,0:11:96.64:97,0,118	0/1:10,0:10:68.77:159,0,69	1/1:11,1:12:32.88:512,33,0	1/1:11,1:12:33.11:538,33,0	1/1:15,1:15:42.14:691,42,0	0/1:11,1:9:5.25:259,0,5
chr10	68447228	.	TTTTTGGG	T	4230.61	PASS	AB=1.000;AC=45;AF=0.804;AN=56;BaseQRankSum=3.855;DP=455;FS=2.629;HRun=0;HaplotypeScore=125.8818;InbreedingCoeff=-0.0127;MQ=55.67;MQ0=32;MQRankSum=2.549;QD=11.19;ReadPosRankSum=3.631;VQSLOD=3.8587;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:20:2.56:3,0,175	1/1:2,0:2:2.98:22,3,0	0/0:77,0:20:18.96:0,19,382	0/1:81,0:27:39.21:39,0,351	0/1:26,0:25:99:102,0,390	1/1:12,1:13:35.94:314,36,0	1/1:11,0:10:10.57:109,11,0	0/1:24,0:21:24.15:205,0,24	1/1:4,0:4:12.01:125,12,0	1/1:13,0:12:29.85:261,30,0	1/1:18,1:19:29.30:298,29,0	1/1:6,0:6:17.98:178,18,0	0/1:11,0:10:68.08:68,0,97	1/1:6,1:6:17.99:169,18,0	1/1:7,0:7:20.98:196,21,0	1/1:3,1:4:11.23:104,11,0	1/1:8,0:7:17.99:184,18,0	1/1:16,0:16:6.02:90,6,0	0/1:12,0:10:11.29:158,0,11	0/1:10,0:9:5.98:107,0,6	1/1:4,0:4:2.95:26,3,0	1/1:4,0:4:9.02:101,9,0	0/1:11,0:11:44:44,0,84	0/1:10,0:10:58.57:84,0,59	1/1:10,0:12:32.93:331,33,0	1/1:11,0:11:32.90:328,33,0	1/1:15,1:15:41.98:450,42,0	1/1:12,0:9:4.91:135,5,0
chr10	68447232	.	TGGGC	T	8092.23	PASS	AB=1.000;AC=53;AF=0.946;AN=56;BaseQRankSum=-2.263;DP=436;FS=0.959;HRun=0;HaplotypeScore=96.9869;InbreedingCoeff=0.2954;MQ=59.91;MQ0=23;MQRankSum=0.791;QD=22.80;ReadPosRankSum=4.270;VQSLOD=4.5885;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,0:15:12.51:177,13,0	1/1:2,0:2:3.01:40,3,0	0/0:80,0:22:5.26:0,5,328	0/1:85,0:30:99:107,0,361	1/1:22,0:22:51.49:661,51,0	1/1:11,0:12:36.12:564,36,0	1/1:4,10:13:11.07:137,11,0	1/1:2,13:16:10.47:603,10,0	1/1:4,0:4:12.04:184,12,0	1/1:12,0:12:30.10:459,30,0	1/1:5,13:19:30.10:422,30,0	1/1:6,0:6:18.06:254,18,0	1/1:10,0:9:18.51:223,19,0	1/1:6,0:6:18.06:268,18,0	1/1:8,0:7:21.07:330,21,0	1/1:4,0:4:12.04:182,12,0	1/1:8,0:7:18.06:269,18,0	1/1:15,0:15:3.01:38,3,0	1/1:1,12:11:33.10:488,33,0	1/1:8,0:7:12.04:179,12,0	1/1:3,0:3:3.01:50,3,0	1/1:4,0:4:9.03:127,9,0	1/1:10,0:10:18.53:295,19,0	1/1:9,0:10:15.52:211,16,0	1/1:10,1:11:33.11:501,33,0	1/1:11,0:12:36.11:508,36,0	1/1:13,1:15:42.12:555,42,0	1/1:5,0:7:18.06:262,18,0
chr10	68447235	.	GC	G	2850.53	PASS	AB=0.946;AC=53;AF=0.946;AN=56;BaseQRankSum=-0.598;DP=436;FS=3.502;HRun=2;HaplotypeScore=105.5671;InbreedingCoeff=0.3100;MQ=62.76;MQ0=16;MQRankSum=1.191;QD=7.98;ReadPosRankSum=3.931;VQSLOD=1.4302;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:18:10.61:50,11,0	1/1:2,0:2:2.94:18,3,0	0/0:77,1:21:5.79:0,6,138	0/1:82,4:32:51.23:51,0,123	1/1:20,0:20:50.27:319,50,0	1/1:13,0:13:34.30:223,34,0	1/1:14,0:13:5.49:28,5,0	1/1:17,0:16:11.04:211,11,0	1/1:5,0:5:11.17:73,11,0	1/1:12,0:12:28.96:196,29,0	1/1:19,0:19:25.71:120,26,0	1/1:6,0:6:16.31:97,16,0	1/1:10,0:10:16.09:105,16,0	1/1:8,0:7:17.58:100,18,0	1/1:7,0:7:19.31:120,19,0	1/1:4,0:4:11.17:73,11,0	1/1:7,0:7:14.93:66,15,0	1/1:15,0:15:2.22:7,2,0	1/1:12,0:11:26.26:172,26,0	1/1:8,0:7:10.53:57,11,0	1/1:4,0:4:3.87:24,4,0	1/1:4,0:4:7.55:34,8,0	1/1:9,0:9:18.37:135,18,0	1/1:8,0:8:14.25:91,14,0	1/1:13,0:13:29.09:147,29,0	1/1:12,0:12:32.07:175,32,0	1/1:15,0:15:36.04:180,36,0	1/1:7,0:7:15.61:87,16,0
chr10	68448112	.	AAATAAT	A	645.42	PASS	AC=20;AF=0.667;AN=30;BaseQRankSum=2.618;DP=223;FS=3.220;HRun=0;HaplotypeScore=53.4028;InbreedingCoeff=0.5252;MQ=65.40;MQ0=1;MQRankSum=-2.928;QD=8.49;ReadPosRankSum=2.411;VQSLOD=1.5533;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:12:14.98:0,15,376	./.	./.	./.	0/0:6,0:9:5.92:0,6,39	1/1:2,3:5:3.01:60,3,0	./.	0/0:36,0:36:9.20:0,9,41	1/1:3,1:4:3.01:60,3,0	1/1:5,0:8:9.03:125,9,0	1/1:6,0:11:15.02:187,15,0	1/1:3,1:4:3.01:60,3,0	./.	1/1:0,1:1:3.01:60,3,0	./.	./.	1/1:16,3:19:3.01:60,3,0	0/0:7,0:11:11.77:0,12,73	1/1:8,0:9:3.01:42,3,0	1/1:7,0:9:6.02:83,6,0	./.	./.	./.	0/0:4,0:4:3.01:0,3,94	./.	1/1:6,0:6:3:28,3,0	./.	./.
chr10	68448136	.	T	TA	486.62	PASS	AB=0.714;AC=1;AF=0.020;AN=50;BaseQRankSum=-5.081;DP=159;FS=5.131;HRun=2;HaplotypeScore=29.0262;InbreedingCoeff=-0.0799;MQ=54.58;MQ0=2;MQRankSum=-0.315;QD=12.17;ReadPosRankSum=-0.137;VQSLOD=1.8372;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:12:26.98:0,27,313	0/0:1,0:1:3.01:0,3,37	0/0:3,0:2:2.90:0,3,37	0/0:7,0:4:0.15:0,0,16	0/0:8,0:8:23.97:0,24,276	0/0:7,0:7:14.88:0,15,164	./.	0/1:24,16:40:99:560,0,504	0/0:2,0:2:5.85:0,6,51	0/0:6,0:6:17.26:0,17,146	0/0:5,0:5:13.92:0,14,81	0/0:4,0:4:11.87:0,12,125	0/0:1,0:1:3.01:0,3,37	0/0:1,0:1:2.84:0,3,14	0/0:2,0:2:3.01:0,3,37	0/0:3,0:3:9.03:0,9,111	0/0:16,0:16:37.98:0,38,423	0/0:9,0:9:26.66:0,27,251	0/0:4,0:4:8.82:0,9,87	0/0:6,0:6:17.63:0,18,174	0/0:3,0:3:9.03:0,9,111	./.	./.	0/0:4,0:4:12.04:0,12,148	0/0:5,0:5:15.05:0,15,185	0/0:2,0:2:6.01:0,6,66	0/0:5,0:5:15.05:0,15,185	0/0:2,0:2:6.02:0,6,73
chr10	68448896	.	TTC	T	1413.32	PASS	AB=0.905;AC=5;AF=0.089;AN=56;BaseQRankSum=5.775;DP=538;FS=3.939;HRun=0;HaplotypeScore=122.1053;InbreedingCoeff=0.7650;MQ=66.44;MQ0=2;MQRankSum=-2.992;QD=23.56;ReadPosRankSum=1.734;VQSLOD=4.0527;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,108,1844	0/0:8,0:8:24.08:0,24,426	0/0:22,0:12:21.04:0,21,308	0/0:13,0:11:21.07:0,21,369	0/0:34,0:34:99:0,99,1746	0/0:26,0:26:72.25:0,72,1252	0/0:13,0:13:36.12:0,36,620	0/0:39,0:39:96.27:0,96,1571	0/0:13,0:13:36.12:0,36,630	1/1:2,25:27:78.26:1062,78,0	1/1:2,12:14:33.11:453,33,0	0/0:18,0:18:48.16:0,48,832	0/0:19,0:19:57.20:0,57,1006	0/0:12,0:12:30.10:0,30,520	0/0:25,0:25:24.07:0,24,392	0/0:15,0:15:39.13:0,39,674	0/0:10,0:10:12:0,12,177	0/0:12,0:12:31.76:0,32,511	0/0:21,0:21:51.17:0,51,874	0/0:25,0:25:66.22:0,66,1138	0/0:10,0:10:30.10:0,30,522	0/0:22,0:22:56.32:0,56,969	0/0:11,0:11:30.09:0,30,495	0/0:15,0:15:42.14:0,42,733	0/0:22,0:22:59.20:0,59,1057	0/1:17,2:19:28.18:28,0,783	0/0:25,0:25:72.20:0,72,1236	0/0:11,0:11:33.11:0,33,585
chr10	68448931	.	T	TCTTTCTTC	11927.78	PASS	AB=0.983;AC=35;AF=0.625;AN=56;BaseQRankSum=8.360;DP=619;FS=19.679;HRun=0;HaplotypeScore=223.7523;InbreedingCoeff=0.5405;MQ=42.19;MQ0=7;MQRankSum=-8.219;QD=25.82;ReadPosRankSum=0.949;VQSLOD=3.1505;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:42:88.50:0,89,1691	1/1:12,0:12:29.68:405,30,0	0/0:10,0:2:5.81:0,6,73	0/0:11,0:9:1.47:0,1,127	0/0:29,0:29:75.07:0,75,1357	1/1:28,0:26:63.13:1037,63,0	0/1:15,0:14:19.07:361,0,19	0/1:45,0:45:85.32:701,0,85	1/1:17,0:15:15.53:444,16,0	1/1:33,0:33:89.63:1527,90,0	1/1:14,0:14:33.48:548,33,0	1/1:25,0:25:2.51:678,3,0	0/0:22,0:22:60.15:0,60,1260	1/1:17,0:17:27.95:343,28,0	1/1:9,20:30:6.10:47,6,0	1/1:21,0:21:49.19:836,49,0	0/1:10,0:10:12.04:72,0,12	0/0:10,0:10:4.87:0,5,160	0/1:20,0:18:99:161,0,109	1/1:33,0:33:50.32:543,50,0	0/1:10,0:11:0.50:153,0,1	1/1:28,0:27:54.02:814,54,0	0/0:13,0:13:39.08:0,39,726	0/0:18,0:18:48.12:0,48,931	1/1:21,0:21:52.52:886,53,0	1/1:27,0:25:54.41:899,54,0	1/1:37,0:37:94.68:1058,95,0	1/1:18,0:15:17.41:413,17,0
chr10	68448935	.	T	TCTTC	8510.38	PASS	AB=1.000;AC=36;AF=0.643;AN=56;BaseQRankSum=7.566;DP=608;FS=15.672;HRun=0;HaplotypeScore=195.8926;InbreedingCoeff=0.5856;MQ=40.15;MQ0=7;MQRankSum=-5.398;QD=18.50;ReadPosRankSum=0.786;VQSLOD=3.6529;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:41:88.16:0,88,1307	1/1:11,0:11:23.07:259,23,0	0/0:8,0:2:5.91:0,6,71	0/0:8,0:6:1.47:0,1,114	0/0:28,0:28:72.58:0,73,993	1/1:27,0:25:66.07:914,66,0	0/1:17,0:16:44.65:222,0,45	0/1:42,0:42:99:394,0,145	1/1:17,1:16:16.04:363,16,0	1/1:32,0:32:60.17:729,60,0	1/1:14,0:14:13.44:285,13,0	1/1:24,0:24:8.44:496,8,0	0/0:20,0:20:60.14:0,60,918	1/1:17,0:17:16.03:257,16,0	1/1:31,0:31:3.05:61,3,0	1/1:21,0:21:47.12:610,47,0	1/1:3,6:10:8.45:100,8,0	0/0:11,0:11:7.34:0,7,125	0/1:22,0:20:78.20:78,0,168	1/1:32,0:32:42.96:422,43,0	0/1:10,0:10:6.52:131,0,7	1/1:28,0:27:56.99:689,57,0	0/0:13,0:13:39.08:0,39,560	0/0:17,0:17:48.07:0,48,682	1/1:22,0:22:55.98:695,56,0	1/1:28,0:26:37.94:669,38,0	1/1:36,0:36:67.12:755,67,0	1/1:18,0:15:15.97:380,16,0
chr10	68450312	.	TTTTTTTTTTTTTTCTTC	T	529.20	PASS	AB=1.000;AC=12;AF=0.273;AN=44;BaseQRankSum=2.297;DP=406;FS=0.000;HRun=0;HaplotypeScore=154.0638;InbreedingCoeff=0.4762;MQ=65.63;MQ0=34;MQRankSum=-1.452;QD=5.46;ReadPosRankSum=1.093;VQSLOD=2.7237;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:23:45.15:0,45,2060	./.	0/0:46,0:16:9.02:0,9,170	0/0:40,0:17:19.30:0,19,412	0/0:24,0:22:45.15:0,45,2264	./.	1/1:9,0:8:2.81:83,3,0	0/0:23,0:20:41.66:0,42,1221	1/1:8,1:8:2.94:125,3,0	0/0:17,0:16:36.12:0,36,1719	0/0:16,0:14:30.10:0,30,1356	0/0:2,0:2:0:0,0,0	0/0:7,0:6:15.05:0,15,782	./.	0/0:12,0:11:2.22:0,2,7	0/1:11,0:10:5.44:112,0,5	1/1:27,0:26:4.91:154,5,0	0/0:13,0:12:27.09:0,27,1327	0/0:10,0:7:2.22:0,2,7	./.	./.	./.	0/0:11,0:10:27.09:0,27,1443	0/0:10,0:8:23.44:0,23,926	0/0:15,0:15:0:0,0,0	1/1:21,0:20:0.83:42,1,0	1/1:10,1:10:2.75:125,3,0	0/1:9,0:8:15.39:15,0,17
chr10	68450325	.	TCTTC	T	2246.49	PASS	AB=0.909;AC=38;AF=0.679;AN=56;BaseQRankSum=-4.087;DP=345;FS=8.031;HRun=0;HaplotypeScore=56.3458;InbreedingCoeff=-0.0628;MQ=49.23;MQ0=40;MQRankSum=-0.014;QD=7.34;ReadPosRankSum=-3.442;VQSLOD=-0.1613;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:22:20.79:21,0,341	1/1:3,0:1:3.01:40,3,0	0/1:32,2:5:25.60:52,0,26	0/0:28,0:10:0.20:0,0,85	0/1:23,0:20:4.12:4,0,338	1/1:3,0:2:6.02:79,6,0	1/1:10,0:7:11.98:129,12,0	0/1:21,0:18:94.60:215,0,95	1/1:7,0:6:9.03:111,9,0	0/1:5,0:14:83.08:83,0,126	0/1:13,0:12:19.68:136,0,20	1/1:5,0:4:9.03:110,9,0	0/0:9,0:8:7.89:0,8,144	1/1:6,0:5:12.04:158,12,0	1/1:11,0:10:15:169,15,0	1/1:6,0:5:5.98:51,6,0	1/1:22,0:20:35.70:371,36,0	0/1:14,0:13:11.19:11,0,232	1/1:6,7:10:14.37:268,14,0	0/1:2,3:4:0:0,0,0	0/1:4,0:3:0:0,0,0	0/1:5,0:5:0:1,0,0	0/1:12,0:11:45.09:45,0,113	0/1:12,0:10:55.10:55,0,57	1/1:7,0:7:2.92:18,3,0	0/1:4,11:14:1.96:94,0,2	1/1:8,0:7:15.86:160,16,0	0/1:6,0:5:9.85:10,0,12
chr10	68450978	.	GT	G	15597.89	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=15.307;DP=669;FS=0.936;HRun=1;HaplotypeScore=95.7801;InbreedingCoeff=0.9993;MQ=73.56;MQ0=0;MQRankSum=-2.285;QD=38.42;ReadPosRankSum=2.586;VQSLOD=5.2519;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:78.27:0,78,1242	1/1:0,15:15:42.10:565,42,0	0/0:25,0:23:66.19:0,66,991	0/0:22,0:21:57.19:0,57,904	0/0:33,0:33:99:0,99,1544	1/1:0,22:22:63.21:881,63,0	1/1:0,27:27:72.24:1007,72,0	0/0:28,0:28:84.28:0,84,1311	1/1:0,22:22:63.21:881,63,0	0/0:23,0:23:69.24:0,69,1101	0/0:27,0:27:78.27:0,78,1246	1/1:0,25:25:72.20:985,72,0	0/0:13,0:13:39.13:0,39,621	1/1:0,25:25:66.22:919,66,0	1/1:0,23:23:66.22:920,66,0	1/1:0,20:20:60.20:839,60,0	1/1:0,27:27:72.24:1006,72,0	0/0:10,0:10:30.10:0,30,480	1/1:0,16:16:48.14:651,48,0	1/1:0,36:36:99:1359,99,0	1/1:1,45:46:99:1702,109,0	1/1:0,27:27:63.21:881,63,0	0/0:31,0:31:87.30:0,87,1390	0/0:24,0:24:72.25:0,72,1151	1/1:0,16:16:45.15:629,45,0	1/1:0,23:23:69.21:947,69,0	1/1:0,29:29:81.27:1132,81,0	1/1:0,7:7:21.07:294,21,0
chr10	68451275	.	GAC	G	1101	PASS	AB=0.952;AC=18;AF=0.321;AN=56;BaseQRankSum=2.168;DP=666;FS=1.945;HRun=0;HaplotypeScore=178.4966;InbreedingCoeff=-0.3057;MQ=63.36;MQ0=12;MQRankSum=-2.778;QD=2.96;ReadPosRankSum=-5.490;VQSLOD=1.1773;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,123,2122	0/0:8,0:8:14.91:0,15,114	0/0:33,0:22:56.63:0,57,657	0/0:46,0:35:24.78:0,25,758	0/0:29,0:29:77.73:0,78,1230	0/1:23,0:23:30.09:30,0,169	0/1:19,3:21:82.60:83,0,136	0/1:37,6:42:99:240,0,201	0/1:21,3:24:43.60:44,0,233	0/0:26,0:26:78.24:0,78,1357	0/0:22,0:22:41.93:0,42,887	0/1:13,0:13:19.07:19,0,138	0/0:20,0:20:47.51:0,48,828	0/1:10,1:11:60.34:60,0,71	0/0:13,0:12:20.48:0,20,173	0/1:25,0:25:13.18:13,0,297	0/1:23,1:24:99:152,0,169	1/1:6,2:8:11.59:74,12,0	0/1:14,0:12:40.50:40,0,123	0/1:34,0:32:99:114,0,318	0/1:24,1:23:72.36:72,0,176	0/1:19,3:22:75.01:75,0,220	0/0:24,0:24:69.11:0,69,1039	0/0:29,0:29:78.23:0,78,1438	0/1:12,1:13:43.57:44,0,100	0/1:34,1:35:76.61:77,0,459	0/1:29,1:27:99:123,0,201	0/1:6,0:6:4.46:4,0,80
chr10	68451289	.	CAG	C	3006.22	PASS	AB=0.992;AC=35;AF=0.625;AN=56;BaseQRankSum=15.188;DP=682;FS=12.509;HRun=0;HaplotypeScore=185.0707;InbreedingCoeff=0.4563;MQ=56.57;MQ0=15;MQRankSum=0.742;QD=6.71;ReadPosRankSum=1.886;VQSLOD=2.4563;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,129,2219	1/1:8,0:8:7.26:22,7,0	0/0:38,0:22:46.88:0,47,728	0/0:50,0:33:60.46:0,60,1026	0/0:31,0:31:84.15:0,84,1477	1/1:23,1:24:12.23:84,12,0	1/1:20,1:20:10.71:135,11,0	0/1:30,0:30:40.49:533,0,40	1/1:25,0:25:32.60:206,33,0	0/1:31,0:31:99:113,0,759	0/1:27,0:27:3.68:4,0,645	1/1:17,0:17:16.61:88,17,0	0/0:21,0:21:57.17:0,57,949	1/1:12,0:12:23.74:183,24,0	1/1:12,0:11:7.20:24,7,0	1/1:21,0:21:21.89:68,22,0	0/1:22,0:22:31.48:74,0,31	0/1:9,0:10:26.14:40,0,26	0/1:16,1:15:21.69:96,0,22	1/1:38,0:36:55.78:325,56,0	1/1:19,3:20:21.94:110,22,0	1/1:20,0:20:28.03:242,28,0	0/0:21,0:21:57.19:0,57,995	0/0:27,0:27:72.22:0,72,1251	1/1:13,0:13:15.19:111,15,0	0/1:36,0:36:90.77:336,0,91	1/1:34,1:32:39.61:289,40,0	1/1:6,1:7:14.34:125,14,0
chr10	68451291	.	G	GAC	12819.74	PASS	AB=0.741;AC=35;AF=0.625;AN=56;BaseQRankSum=14.605;DP=696;FS=12.921;HRun=0;HaplotypeScore=162.4992;InbreedingCoeff=0.7660;MQ=56.38;MQ0=15;MQRankSum=-3.185;QD=31.73;ReadPosRankSum=3.398;VQSLOD=6.3861;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,132,1921	1/1:1,6:8:12.03:232,12,0	0/0:37,0:21:46.54:0,47,659	0/0:51,0:34:67.87:0,68,926	0/0:31,0:31:87.16:0,87,1301	1/1:2,22:24:30.03:548,30,0	1/1:5,17:23:30.07:487,30,0	0/1:15,18:33:7.13:855,0,7	1/1:5,21:26:48.14:857,48,0	0/0:31,0:31:47.11:0,47,777	0/0:26,0:26:31.21:0,31,517	1/1:1,16:17:33.11:619,33,0	0/0:21,0:21:57.17:0,57,826	1/1:3,11:14:30.10:540,30,0	1/1:1,13:13:21.07:405,21,0	1/1:1,21:22:54.12:1001,54,0	1/1:5,17:22:0.47:724,0,0	0/1:9,1:10:45.13:45,0,46	0/1:8,8:14:3.03:426,0,3	1/1:5,34:38:78.24:1465,78,0	1/1:6,16:20:38.99:732,39,0	1/1:4,15:19:36.03:637,36,0	0/0:21,0:21:57.19:0,57,870	0/0:28,0:28:72.23:0,72,1072	1/1:1,12:13:24.07:427,24,0	1/1:7,30:37:21.35:1527,21,0	1/1:5,31:33:54.16:1014,54,0	1/1:3,4:7:18.04:279,18,0
chr10	68451309	.	A	AACAG	7019.34	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=10.026;DP=675;FS=11.403;HRun=0;HaplotypeScore=202.9018;InbreedingCoeff=0.9524;MQ=58.96;MQ0=7;MQRankSum=0.435;QD=15.74;ReadPosRankSum=3.247;VQSLOD=3.6202;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,120,2047	1/1:7,0:7:14.63:103,15,0	0/0:41,0:27:60.61:0,61,921	0/0:47,0:32:58.16:0,58,885	0/0:32,0:32:87.70:0,88,1390	1/1:23,0:23:26:154,26,0	1/1:16,0:16:17.71:127,18,0	1/1:29,0:29:23.94:225,24,0	1/1:19,0:19:34.76:219,35,0	1/1:7,24:33:81.25:1715,81,0	1/1:3,26:30:60.20:1051,60,0	1/1:19,0:19:33.72:229,34,0	0/0:20,0:20:60.15:0,60,959	1/1:14,0:14:24.11:193,24,0	1/1:17,0:17:20.21:108,20,0	1/1:22,0:22:50.99:275,51,0	1/1:21,0:21:40.01:268,40,0	1/1:8,0:8:3.93:54,4,0	1/1:21,0:18:24.89:187,25,0	1/1:38,0:36:67.52:485,68,0	1/1:20,0:20:37.60:251,38,0	1/1:20,0:20:18.63:197,19,0	0/0:22,0:22:63.16:0,63,1011	0/0:24,0:24:63.69:0,64,1105	1/1:11,0:11:17.43:113,17,0	1/1:34,2:36:75.51:639,76,0	1/1:34,0:32:28.93:363,29,0	1/1:8,0:8:8.76:63,9,0
chr10	68451600	.	C	CCTGT	3667.62	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=1.537;DP=540;FS=38.542;HRun=0;HaplotypeScore=83.9668;InbreedingCoeff=0.8023;MQ=76.78;MQ0=8;MQRankSum=-3.959;QD=11.57;ReadPosRankSum=-2.887;VQSLOD=0.5682;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:83.89:0,84,833	1/1:5,0:5:9:92,9,0	0/0:30,0:18:37.96:0,38,386	0/0:35,0:28:65.95:0,66,640	0/0:22,0:22:44.91:0,45,413	1/1:18,0:17:3.01:62,3,0	1/1:23,0:22:11.87:209,12,0	1/1:34,0:34:85.16:731,85,0	1/1:21,0:21:9.03:170,9,0	0/0:25,0:25:66:0,66,595	0/0:16,0:16:41.95:0,42,412	1/1:10,0:10:6.02:122,6,0	0/0:14,0:14:38.85:0,39,320	1/1:26,1:27:6.02:139,6,0	1/1:21,2:23:2:211,2,0	1/1:15,0:15:3.01:78,3,0	1/1:4,21:27:12.04:298,12,0	0/0:5,0:5:8.97:0,9,90	1/1:2,7:10:26.98:305,27,0	1/1:9,0:7:14.95:119,15,0	1/1:25,0:27:41.91:389,42,0	1/1:6,0:4:5.99:50,6,0	0/0:11,0:11:29.95:0,30,246	0/0:34,0:34:89.98:0,90,1001	1/1:10,0:10:11.90:100,12,0	1/1:18,0:18:41.94:386,42,0	1/1:26,0:24:8.64:184,9,0	1/1:5,0:5:2.99:23,3,0
chr10	68451601	.	C	CTGTCTG	4480.70	PASS	AB=1.000;AC=35;AF=0.625;AN=56;BaseQRankSum=0.410;DP=583;FS=47.877;HRun=0;HaplotypeScore=110.2658;InbreedingCoeff=0.7485;MQ=74.19;MQ0=9;MQRankSum=-4.427;QD=12.77;ReadPosRankSum=-3.422;VQSLOD=1.3749;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:83.89:0,84,906	1/1:4,0:5:9:103,9,0	0/0:30,0:18:37.96:0,38,386	0/0:34,0:27:65.95:0,66,640	0/0:22,0:22:44.91:0,45,428	1/1:4,15:19:3.01:106,3,0	1/1:9,19:28:4.70:272,5,0	1/1:35,0:35:84.37:730,84,0	1/1:5,18:23:12.04:361,12,0	0/0:26,0:26:65.83:0,66,615	0/0:12,0:16:41.95:0,42,447	1/1:1,8:11:6.02:210,6,0	0/0:14,0:14:38.86:0,39,334	1/1:1,26:29:6.02:160,6,0	1/1:7,16:28:2.09:192,2,0	1/1:16,0:16:6.02:118,6,0	1/1:26,1:27:12.04:246,12,0	0/0:3,0:5:8.98:0,9,118	1/1:14,0:13:35.84:404,36,0	0/1:9,0:7:6.27:141,0,6	1/1:30,0:28:41.78:389,42,0	1/1:6,0:4:5.99:50,6,0	0/0:12,0:12:29.74:0,30,245	0/0:36,0:37:89.96:0,90,1130	1/1:13,0:13:11.86:100,12,0	1/1:21,0:21:50.56:558,51,0	1/1:3,22:27:9.50:318,10,0	1/1:5,0:5:2.99:23,3,0
chr10	68451603	.	G	GTC	2684.78	PASS	AB=0.994;AC=30;AF=0.536;AN=56;BaseQRankSum=2.948;DP=585;FS=37.001;HRun=0;HaplotypeScore=90.5228;InbreedingCoeff=0.4678;MQ=69.73;MQ0=9;MQRankSum=-4.615;QD=7.63;ReadPosRankSum=-0.836;VQSLOD=1.1986;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:89.86:0,90,822	1/1:5,0:5:8.03:55,8,0	0/0:28,0:16:37.96:0,38,386	0/0:31,0:24:65.95:0,66,640	0/0:22,0:22:44.76:0,45,398	1/1:17,0:16:3.01:36,3,0	0/1:27,1:27:31.37:108,0,31	1/1:37,0:37:87.51:762,88,0	1/1:24,0:23:10.84:114,11,0	0/0:27,0:27:66.47:0,66,596	0/0:16,0:16:41.88:0,42,373	1/1:11,0:11:6.02:70,6,0	0/0:14,0:14:38.84:0,39,305	1/1:27,0:27:6.02:69,6,0	1/1:25,0:25:2.08:97,2,0	1/1:4,13:17:5.95:71,6,0	0/1:29,0:29:3.94:124,0,4	0/0:5,0:5:9.39:0,9,63	1/1:15,0:14:30.14:272,30,0	0/1:11,0:9:23.53:93,0,24	1/1:32,0:30:19.88:364,20,0	1/1:5,0:3:5.99:50,6,0	0/0:12,0:12:32.88:0,33,263	0/0:41,0:41:95.93:0,96,963	0/1:13,0:13:8.05:85,0,8	0/1:22,0:22:11.81:393,0,12	1/1:27,0:25:8.35:105,8,0	0/1:7,0:7:14.04:14,0,33
chr10	68452529	.	GA	G	3233.06	PASS	AB=0.965;AC=39;AF=0.696;AN=56;BaseQRankSum=8.288;DP=529;FS=4.934;HRun=9;HaplotypeScore=95.2058;InbreedingCoeff=0.8650;MQ=56.08;MQ0=24;MQRankSum=-7.631;QD=9.92;ReadPosRankSum=0.834;VQSLOD=2.6299;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:84.70:0,85,958	1/1:3,5:8:14.93:120,15,0	0/1:53,2:11:1.93:2,0,112	0/0:67,0:15:5.43:0,5,173	0/0:21,0:22:51.06:0,51,556	1/1:3,13:16:37.26:285,37,0	1/1:9,5:13:3.70:86,4,0	1/1:15,11:24:18.83:245,19,0	1/1:4,6:9:19.50:174,19,0	0/0:19,0:19:23.81:0,24,322	0/0:20,0:20:41.88:0,42,428	1/1:5,4:8:14.97:128,15,0	0/0:9,0:9:15.04:0,15,171	1/1:3,14:17:29.64:230,30,0	1/1:2,9:11:21.47:186,21,0	1/1:5,8:13:26.48:215,26,0	1/1:9,8:17:11.15:148,11,0	1/1:6,11:16:35.46:312,35,0	1/1:4,5:9:17.30:149,17,0	1/1:8,17:25:22.96:182,23,0	1/1:3,4:6:11.99:105,12,0	1/1:7,6:13:11.01:93,11,0	0/0:18,0:18:35.84:0,36,378	0/0:11,0:11:30.09:0,30,346	1/1:9,6:15:23.10:149,23,0	1/1:13,7:20:29.02:239,29,0	1/1:3,11:14:38.47:286,38,0	1/1:5,5:10:7.65:106,8,0
chr10	68452537	.	AAG	A	1552.60	PASS	AB=1.000;AC=37;AF=0.661;AN=56;BaseQRankSum=9.571;DP=587;FS=18.679;HRun=0;HaplotypeScore=110.9330;InbreedingCoeff=0.7396;MQ=55.95;MQ0=21;MQRankSum=-5.888;QD=4.81;ReadPosRankSum=0.239;VQSLOD=1.7623;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:82.32:0,82,1064	1/1:7,0:7:5.26:22,5,0	0/0:63,0:11:14.02:0,14,131	0/0:72,0:17:14.64:0,15,129	0/0:25,0:25:43.03:0,43,544	1/1:20,0:20:14.86:69,15,0	1/1:12,0:11:10.35:59,10,0	1/1:28,1:27:19.36:238,19,0	1/1:9,0:9:4.71:54,5,0	0/0:20,0:20:15.68:0,16,400	0/0:22,0:22:38.12:0,38,365	1/1:11,0:10:16.08:94,16,0	0/0:6,0:6:14.99:0,15,156	1/1:19,0:19:24.22:110,24,0	1/1:13,0:13:12.72:94,13,0	1/1:12,0:12:9.64:44,10,0	1/1:19,0:19:18.57:94,19,0	0/1:21,0:20:26.03:75,0,26	1/1:18,0:18:16.93:185,17,0	0/1:28,0:29:2.07:40,0,2	1/1:6,0:6:11.18:38,11,0	1/1:9,1:10:10.49:48,10,0	0/1:22,0:22:0.93:1,0,362	0/0:12,0:12:33.04:0,33,367	1/1:21,1:22:22.03:184,22,0	1/1:19,1:19:15.50:141,16,0	1/1:15,0:15:28.69:113,29,0	1/1:8,0:8:13.36:51,13,0
chr10	68452538	.	AG	A	2761.02	PASS	AB=0.920;AC=40;AF=0.714;AN=56;BaseQRankSum=10.228;DP=588;FS=28.014;HRun=1;HaplotypeScore=99.9930;InbreedingCoeff=0.7659;MQ=56.00;MQ0=21;MQRankSum=-7.487;QD=8.05;ReadPosRankSum=-1.005;VQSLOD=-0.6566;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:58.54:0,59,808	1/1:7,0:7:17.26:85,17,0	0/0:62,1:11:3.09:0,3,92	0/0:72,0:17:3.68:0,4,96	0/0:26,0:26:20.83:0,21,391	1/1:20,0:20:41.40:188,41,0	1/1:12,0:11:21.62:112,22,0	1/1:29,0:27:52.12:326,52,0	1/1:10,0:9:18.73:103,19,0	0/1:17,4:21:0.91:1,0,341	0/0:21,1:22:18.19:0,18,254	1/1:11,0:10:17.98:102,18,0	0/0:6,0:6:14.41:0,14,112	1/1:19,0:19:38.39:197,38,0	1/1:14,0:14:24.36:119,24,0	1/1:11,1:12:25.60:114,26,0	1/1:19,0:19:22.88:133,23,0	1/1:21,0:20:8.04:150,8,0	1/1:17,0:17:25.93:225,26,0	1/1:26,1:27:37.83:169,38,0	1/1:6,0:6:5.72:47,6,0	1/1:10,0:10:16.59:88,17,0	0/1:22,0:22:43.02:43,0,238	0/0:12,0:12:32.67:0,33,280	1/1:21,0:21:38.16:210,38,0	1/1:21,0:20:34.70:237,35,0	1/1:16,0:16:36.81:209,37,0	1/1:8,0:8:17.07:94,17,0
chr10	68452550	.	A	AAAG	8306.95	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=1.530;DP=604;FS=1.742;HRun=0;HaplotypeScore=97.3913;InbreedingCoeff=0.9775;MQ=58.12;MQ0=19;MQRankSum=-4.144;QD=25.25;ReadPosRankSum=3.385;VQSLOD=5.1068;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,100,1080	1/1:1,5:7:18:343,18,0	0/0:51,0:9:20.41:0,20,169	0/0:62,0:15:21.86:0,22,186	0/0:30,0:30:75.47:0,75,794	1/1:2,12:17:35.47:566,35,0	1/1:0,10:14:18.05:280,18,0	1/1:10,20:31:66.61:979,67,0	1/1:9,5:13:35.69:395,36,0	0/0:25,0:25:61.89:0,62,722	0/0:19,0:19:50.65:0,51,576	1/1:5,5:9:14.52:201,15,0	0/0:8,0:8:20.82:0,21,195	1/1:5,13:19:35.45:551,35,0	1/1:5,10:16:20.97:301,21,0	1/1:1,9:12:19.28:390,19,0	1/1:6,4:20:17.12:227,17,0	1/1:2,0:18:35.90:293,36,0	1/1:2,14:19:13.79:535,14,0	1/1:10,20:32:53.93:712,54,0	1/1:6,2:8:17.83:217,18,0	1/1:3,8:11:14.95:238,15,0	0/0:23,0:23:54.86:0,55,650	0/0:12,0:12:32.58:0,33,346	1/1:4,19:24:39.11:647,39,0	1/1:18,5:23:55.30:725,55,0	1/1:2,6:19:33.49:513,33,0	1/1:3,3:10:12.02:193,12,0
chr10	68453461	.	CA	C	16094.93	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=10.912;DP=663;FS=1.393;HRun=2;HaplotypeScore=72.4256;InbreedingCoeff=0.9995;MQ=66.84;MQ0=1;MQRankSum=-3.512;QD=35.14;ReadPosRankSum=3.077;VQSLOD=5.4373;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,120,2252	1/1:0,12:12:36.12:467,36,0	0/0:35,0:31:84.11:0,84,1173	0/0:36,0:32:90.28:0,90,1296	0/0:24,0:24:72.23:0,72,1058	1/1:0,20:20:60.20:779,60,0	1/1:0,12:12:36.12:467,36,0	1/1:2,30:32:84.26:1076,84,0	1/1:0,29:29:75.24:973,75,0	1/1:0,22:22:60.16:778,60,0	1/1:0,12:12:24.08:312,24,0	1/1:0,20:20:54.18:701,54,0	0/0:14,0:14:42.12:0,42,607	1/1:1,14:15:39.13:506,39,0	1/1:0,24:24:72.23:935,72,0	1/1:1,18:19:51.17:662,51,0	1/1:0,33:33:96.31:1246,96,0	1/1:1,20:21:54.18:699,54,0	1/1:0,24:24:63.19:805,63,0	1/1:0,14:14:36.12:468,36,0	1/1:1,27:28:75.24:974,75,0	1/1:0,18:18:48.16:623,48,0	0/0:21,0:21:63.19:0,63,904	0/0:21,0:21:60.20:0,60,894	1/1:0,20:20:51.16:662,51,0	1/1:2,25:27:75.24:973,75,0	1/1:0,37:37:99:1364,105,0	1/1:0,19:19:48.16:623,48,0
chr10	68454064	.	ATCTTAC	A	1322.26	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=7.417;DP=455;FS=1.680;HRun=0;HaplotypeScore=92.8676;InbreedingCoeff=0.5742;MQ=82.96;MQ0=0;MQRankSum=-4.123;QD=32.25;ReadPosRankSum=-3.845;VQSLOD=2.5684;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:54.17:0,54,1801	0/0:3,0:3:6.02:0,6,209	0/0:15,0:15:30.13:0,30,1069	0/1:14,0:14:9.80:10,0,653	0/0:20,0:20:57.20:0,57,1858	0/0:25,0:25:69.24:0,69,2365	0/0:11,0:11:33.11:0,33,1140	1/1:5,22:27:66.22:1415,66,0	0/0:17,0:17:51.17:0,51,1644	0/0:19,0:19:48.15:0,48,1510	0/0:22,0:22:63.22:0,63,2130	0/0:11,0:11:33.10:0,33,1071	0/0:7,0:7:21.07:0,21,731	0/0:9,0:9:27.09:0,27,941	0/0:18,0:18:51.18:0,51,1760	0/0:27,0:27:72.25:0,72,2403	0/0:18,0:18:54.19:0,54,1725	0/0:7,0:7:21.07:0,21,681	0/0:25,0:25:60.19:0,60,1988	0/0:24,0:24:69.22:0,69,2265	0/0:29,0:29:78.25:0,78,2627	0/0:10,0:10:21.07:0,21,732	0/0:11,0:11:30.10:0,30,1012	0/0:14,0:14:42.13:0,42,1321	0/0:10,0:10:27.09:0,27,934	0/0:14,0:14:33.11:0,33,1093	0/0:25,0:25:72.25:0,72,2459	0/0:2,0:2:6.02:0,6,148
chr10	68454996	.	G	GAAACA	604.89	PASS	AB=0.571;AC=1;AF=0.018;AN=56;BaseQRankSum=4.292;DP=510;FS=4.846;HRun=0;HaplotypeScore=92.4811;InbreedingCoeff=0.5695;MQ=70.72;MQ0=0;MQRankSum=-5.023;QD=50.41;ReadPosRankSum=-0.192;VQSLOD=3.7873;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:69.24:0,69,1480	0/0:8,0:8:24.08:0,24,521	0/0:13,0:13:30.09:0,30,548	0/0:8,0:8:10.58:0,11,178	0/0:18,0:18:54.19:0,54,1164	0/0:12,0:12:36.12:0,36,782	0/0:16,0:16:42.13:0,42,872	0/0:26,0:25:78.26:0,78,1645	0/0:25,0:25:72.25:0,72,1563	0/0:24,0:24:60.19:0,60,1231	0/0:24,0:24:69.24:0,69,1453	0/0:21,0:21:60.18:0,60,1261	0/0:19,0:19:57.20:0,57,1236	0/0:15,0:15:45.15:0,45,977	0/0:19,0:19:54.17:0,54,1115	0/0:18,0:18:51.17:0,51,1108	0/0:16,0:16:48.14:0,48,999	0/1:3,8:12:0.90:679,0,1	0/0:12,0:12:36.11:0,36,688	0/0:32,0:32:90.31:0,90,1939	0/0:7,0:7:21.07:0,21,456	0/0:17,0:17:51.15:0,51,1028	0/0:18,0:18:54.19:0,54,1159	0/0:14,0:14:42.14:0,42,911	0/0:15,0:14:45.15:0,45,963	0/0:28,0:28:78.26:0,78,1634	0/0:31,0:31:90.26:0,90,1821	0/0:17,0:17:51.18:0,51,1106
chr10	68455230	.	ATGTGTGTGTG	A	2151.47	PASS	AB=0.843;AC=26;AF=0.542;AN=48;BaseQRankSum=6.467;DP=468;FS=2.344;HRun=0;HaplotypeScore=166.7673;InbreedingCoeff=0.3620;MQ=52.76;MQ0=22;MQRankSum=-5.116;QD=9.96;ReadPosRankSum=0.608;VQSLOD=2.6665;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:11.93:0,12,289	1/1:5,1:6:3.01:83,3,0	./.	./.	0/0:14,0:14:3.01:0,3,142	1/1:14,1:16:5.97:94,6,0	1/1:24,0:22:5.98:47,6,0	0/0:22,0:22:1.55:0,2,4	1/1:13,1:15:6.02:148,6,0	1/1:15,0:14:3.01:70,3,0	./.	1/1:16,7:23:21.11:576,21,0	0/0:15,0:14:21.06:0,21,744	1/1:9,0:9:6:90,6,0	1/1:10,0:10:5.23:85,5,0	0/1:6,4:9:0.93:388,0,1	0/1:22,1:22:3.73:96,0,4	0/1:8,0:8:11.16:128,0,11	./.	0/0:17,0:17:2.60:0,3,10	0/0:29,0:28:0:0,0,0	1/1:7,2:9:6.02:164,6,0	0/0:9,0:9:9.01:0,9,212	0/0:26,0:27:47.14:0,47,1258	0/1:15,1:16:13.01:151,0,13	1/1:17,0:18:6.01:92,6,0	1/1:8,1:8:3.01:85,3,0	0/0:8,0:8:0:0,0,0
chr10	68455289	.	CGT	C	3627.14	PASS	AC=40;AF=0.741;AN=54;BaseQRankSum=10.646;DP=463;FS=25.574;HRun=0;HaplotypeScore=106.3795;InbreedingCoeff=0.7716;MQ=59.80;MQ0=31;MQRankSum=-6.889;QD=11.23;ReadPosRankSum=0.175;VQSLOD=1.5902;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:39.05:0,39,522	1/1:1,7:7:3.01:35,3,0	0/0:20,0:13:35.24:0,35,504	0/0:16,0:11:14.81:0,15,296	0/0:10,0:9:27.08:0,27,399	1/1:2,10:12:2.99:23,3,0	1/1:5,22:23:12.03:128,12,0	1/1:8,20:26:60.04:669,60,0	1/1:0,16:16:6.02:69,6,0	1/1:3,6:6:12.04:157,12,0	./.	1/1:1,25:26:25.25:283,25,0	0/0:21,0:19:49.31:0,49,617	1/1:4,7:9:5.93:57,6,0	1/1:1,16:17:11.92:113,12,0	1/1:1,17:17:21.03:253,21,0	1/1:5,24:27:20.27:234,20,0	1/1:5,10:12:24.08:295,24,0	1/1:1,6:7:17.99:177,18,0	1/1:2,8:10:6.02:75,6,0	1/1:7,20:23:3.01:40,3,0	1/1:0,13:13:5.82:69,6,0	0/0:8,0:8:20.68:0,21,231	0/0:36,0:36:73.62:0,74,1039	1/1:1,9:10:6.02:65,6,0	1/1:2,19:21:57.14:646,57,0	1/1:1,13:13:18.04:203,18,0	1/1:1,4:4:3.01:35,3,0
chr10	68455690	.	TTAG	T	12914.79	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=9.634;DP=504;FS=1.159;HRun=0;HaplotypeScore=88.8656;InbreedingCoeff=0.9921;MQ=61.62;MQ0=1;MQRankSum=-3.307;QD=40.49;ReadPosRankSum=3.999;VQSLOD=6.1030;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,102,2284	1/1:0,5:5:12.04:200,12,0	0/0:28,0:22:63.20:0,63,1232	0/0:25,0:24:69.23:0,69,1421	0/0:16,0:16:45.15:0,45,924	1/1:2,16:18:45.15:750,45,0	1/1:0,15:15:36.12:599,36,0	1/1:7,22:28:66.21:1074,66,0	1/1:0,14:14:39.13:650,39,0	0/0:14,0:14:42.14:0,42,952	0/0:15,0:15:39.13:0,39,882	1/1:0,12:13:33.11:549,33,0	0/0:14,0:14:39.13:0,39,883	1/1:1,17:18:45.15:750,45,0	1/1:1,13:14:36.12:600,36,0	1/1:3,18:21:48.16:799,48,0	1/1:0,19:19:54.18:900,54,0	1/1:0,22:22:51.17:850,51,0	1/1:3,14:15:33.11:549,33,0	1/1:0,17:17:51.17:850,51,0	1/1:1,22:23:42.10:699,42,0	1/1:0,9:9:24.08:399,24,0	0/0:14,0:14:36.12:0,36,816	0/0:24,0:24:72.25:0,72,1632	1/1:1,13:14:30.10:500,30,0	1/1:0,19:19:57.19:949,57,0	1/1:1,25:25:60.15:999,60,0	1/1:0,6:5:15.05:250,15,0
chr10	68456423	.	G	GTTT	6406.82	PASS	AB=0.963;AC=41;AF=0.732;AN=56;BaseQRankSum=4.243;DP=501;FS=24.152;HRun=11;HaplotypeScore=103.6748;InbreedingCoeff=0.8617;MQ=80.17;MQ0=5;MQRankSum=-3.289;QD=19.53;ReadPosRankSum=0.074;VQSLOD=1.5086;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:29:75.47:0,75,824	1/1:2,2:10:24.04:286,24,0	0/0:50,0:38:65.16:0,65,623	0/1:25,0:16:5.76:6,0,141	0/0:17,0:17:39:0,39,434	1/1:2,2:17:32.81:362,33,0	1/1:5,0:8:4.21:87,4,0	1/1:22,3:44:75.95:987,76,0	1/1:2,1:9:20.99:227,21,0	1/1:9,0:21:35.18:354,35,0	1/1:5,1:16:33.04:383,33,0	1/1:1,0:5:8.61:75,9,0	0/0:16,0:16:36.07:0,36,420	1/1:2,0:11:20.77:192,21,0	1/1:0,1:9:23.99:266,24,0	1/1:2,0:9:21.05:229,21,0	1/1:9,3:34:52.36:731,52,0	0/0:21,0:21:40.46:0,40,219	1/1:8,1:20:42.08:520,42,0	1/1:3,1:10:17.96:196,18,0	1/1:7,0:18:34.60:341,35,0	1/1:2,1:12:27.53:304,28,0	0/0:15,0:17:35.23:0,35,419	0/0:17,0:17:42.10:0,42,489	1/1:3,0:12:20.98:207,21,0	1/1:5,0:15:32.96:332,33,0	1/1:6,1:17:29.79:290,30,0	1/1:2,0:3:3.01:31,3,0
chr10	68456434	.	TC	T	3456.36	PASS	AB=1.000;AC=41;AF=0.732;AN=56;BaseQRankSum=5.592;DP=465;FS=14.362;HRun=3;HaplotypeScore=91.9501;InbreedingCoeff=0.8455;MQ=83.19;MQ0=5;MQRankSum=-4.529;QD=12.17;ReadPosRankSum=1.455;VQSLOD=1.2022;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:83.98:0,84,960	1/1:12,0:12:30.21:170,30,0	0/0:57,0:38:81.53:0,82,738	0/0:25,0:16:8.01:0,8,199	0/0:18,0:18:33.86:0,34,591	1/1:17,0:17:33.19:149,33,0	1/1:3,0:4:1.07:24,1,0	1/1:39,0:40:71.45:393,71,0	0/1:10,0:10:4.23:71,0,4	1/1:16,0:16:41.12:249,41,0	1/1:13,0:13:26.30:130,26,0	1/1:5,0:5:7.41:31,7,0	0/0:13,0:13:33.09:0,33,419	1/1:10,0:10:18.57:83,19,0	1/1:13,0:12:27.74:144,28,0	1/1:7,0:7:18.03:76,18,0	1/1:26,1:27:62.14:290,62,0	1/1:1,19:20:42.05:497,42,0	1/1:17,0:17:43.22:281,43,0	1/1:10,0:10:24.87:137,25,0	1/1:17,0:16:39.67:211,40,0	1/1:11,0:11:22.41:90,22,0	0/0:16,0:16:45.09:0,45,532	0/0:19,0:19:44.18:0,44,590	1/1:7,0:7:18.24:77,18,0	1/1:12,0:12:29.76:155,30,0	1/1:14,0:14:28.15:163,28,0	1/1:2,0:2:5.66:33,6,0
chr10	68456681	.	A	AAGACAGAC	10280.54	PASS	AC=38;AF=0.704;AN=54;BaseQRankSum=5.693;DP=436;FS=13.678;HRun=0;HaplotypeScore=238.4593;InbreedingCoeff=0.8584;MQ=48.80;MQ0=0;MQRankSum=-6.474;QD=35.33;ReadPosRankSum=2.832;VQSLOD=3.2435;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:51.11:0,51,996	1/1:7,0:7:5.97:108,6,0	0/0:26,0:17:24.01:0,24,435	0/0:23,0:17:36.53:0,37,668	0/0:20,0:20:19.95:0,20,359	1/1:15,6:21:36.12:1163,36,0	1/1:11,1:12:6.02:182,6,0	1/1:27,0:27:40.23:753,40,0	1/1:13,3:16:24.08:723,24,0	1/1:11,0:18:14.98:123,15,0	1/1:6,0:9:8.11:77,8,0	1/1:16,3:21:23.02:745,23,0	0/0:10,0:10:17.98:0,18,312	1/1:10,3:13:15.19:466,15,0	1/1:4,10:14:24.08:724,24,0	1/1:16,3:19:24.08:810,24,0	1/1:6,2:8:5.20:210,5,0	0/0:4,0:9:6:0,6,62	1/1:15,3:18:33.10:1072,33,0	1/1:9,2:11:9.40:356,9,0	1/1:7,1:8:2.19:93,2,0	1/1:16,7:23:21.54:726,22,0	0/0:15,0:15:21.07:0,21,478	0/0:15,0:15:18.28:0,18,240	1/1:11,2:12:12.04:373,12,0	1/1:15,2:17:21.07:870,21,0	1/1:12,4:16:22.35:709,22,0	./.
chr10	68456709	.	AATG	A	1344.93	PASS	AB=0.871;AC=24;AF=0.429;AN=56;BaseQRankSum=8.136;DP=416;FS=4.830;HRun=0;HaplotypeScore=163.0463;InbreedingCoeff=-0.0074;MQ=51.27;MQ0=7;MQRankSum=-7.362;QD=6.69;ReadPosRankSum=-6.212;VQSLOD=0.0756;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:32:71.46:0,71,1407	0/1:1,2:3:8.29:24,0,8	0/0:42,0:20:59.23:0,59,1223	0/0:52,0:29:71.55:0,72,1451	0/0:15,0:15:35.90:0,36,725	0/1:15,2:17:37.03:171,0,37	1/1:5,2:7:4.82:56,5,0	0/1:17,4:20:56.33:56,0,979	0/1:10,2:12:45.12:139,0,45	0/0:19,0:19:54.18:0,54,1225	0/0:8,0:8:21.01:0,21,452	0/1:12,2:14:5.09:101,0,5	0/0:8,0:8:24.06:0,24,536	0/1:9,0:9:56.90:64,0,57	1/1:16,0:16:4.67:180,5,0	0/1:9,2:11:8.23:133,0,8	1/1:6,0:6:5.04:35,5,0	0/1:8,0:8:3.31:3,0,144	0/1:10,1:11:11.35:11,0,430	0/1:7,2:9:22.67:101,0,23	0/1:14,0:13:20.11:20,0,21	1/1:9,0:9:19.07:120,19,0	0/0:16,0:16:39.41:0,39,796	0/0:22,0:22:38.69:0,39,794	0/1:7,2:8:0.76:128,0,1	0/1:10,3:13:45.69:46,0,255	0/1:10,1:11:66.63:111,0,67	1/1:0,1:1:2.90:16,3,0
chr10	68456712	.	G	GCACACACACACA	6219.94	PASS	AB=0.933;AC=36;AF=0.643;AN=56;BaseQRankSum=3.754;DP=489;FS=25.413;HRun=0;HaplotypeScore=248.1806;InbreedingCoeff=0.6791;MQ=49.14;MQ0=10;MQRankSum=-7.678;QD=24.39;ReadPosRankSum=-2.198;VQSLOD=2.4932;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:36:47.96:0,48,1637	1/1:5,0:5:6.02:247,6,0	0/0:45,0:20:3.47:0,3,26	0/0:57,0:30:8.13:0,8,156	0/0:12,0:16:29.98:0,30,843	1/1:19,0:19:12.34:479,12,0	1/1:10,0:10:5.48:113,5,0	1/1:25,0:24:26.99:436,27,0	1/1:13,1:15:8.82:255,9,0	0/0:19,0:20:48.15:0,48,1435	0/0:9,0:9:15.05:0,15,521	1/1:14,1:16:8.29:318,8,0	0/0:10,0:10:15.05:0,15,432	1/1:10,2:11:8.60:341,9,0	1/1:17,0:18:5.32:250,5,0	1/1:14,1:15:17.71:622,18,0	1/1:11,0:11:3.01:71,3,0	1/1:9,0:11:8.76:309,9,0	1/1:15,0:14:26.11:503,26,0	1/1:10,0:11:14.82:444,15,0	1/1:20,0:18:3.83:127,4,0	0/1:12,0:12:0.21:1,0,0	0/0:14,0:17:33.37:0,33,1000	0/0:22,0:23:36.11:0,36,1010	1/1:8,3:12:7.20:282,7,0	0/1:11,2:13:73.07:821,0,73	1/1:9,3:13:11.96:448,12,0	1/1:1,0:1:3.01:153,3,0
chr10	68456744	.	ATAAC	A	497.75	PASS	AB=0.899;AC=10;AF=0.179;AN=56;BaseQRankSum=6.852;DP=609;FS=43.507;HRun=0;HaplotypeScore=174.5750;InbreedingCoeff=-0.2180;MQ=50.25;MQ0=11;MQRankSum=-6.609;QD=2.78;ReadPosRankSum=-0.572;VQSLOD=1.2385;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:45:99:0,117,2569	0/0:5,0:5:9.03:0,9,253	0/0:42,1:20:57.14:0,57,1352	0/0:58,0:28:72.93:0,73,1895	0/0:16,0:16:38.99:0,39,1066	0/1:20,9:29:99:120,0,871	0/0:15,2:17:37.38:0,37,723	0/0:26,0:26:37.76:0,38,1923	0/1:15,1:16:25.27:25,0,767	0/0:30,0:30:87.29:0,87,2441	0/0:13,0:13:33.11:0,33,907	0/1:13,2:15:28.75:29,0,452	0/0:16,0:16:47.19:0,47,1212	0/0:15,4:18:35.77:0,36,807	0/0:12,5:17:31.93:0,32,719	0/1:18,4:22:63.03:63,0,805	0/0:17,0:17:42.13:0,42,1034	0/1:13,0:13:25.72:26,0,786	0/1:17,4:20:99:174,0,1188	0/1:13,2:15:79.48:79,0,620	0/0:33,2:34:74.83:0,75,1712	0/0:10,5:15:24.97:0,25,641	0/0:19,0:19:51.18:0,51,1433	0/0:30,0:31:69.60:0,70,1904	0/1:15,0:14:33.04:33,0,590	0/1:15,2:17:82.69:83,0,1058	0/1:15,1:16:9.35:9,0,742	0/0:7,0:6:17.55:0,18,443
chr10	68457173	.	GAA	G	16681.79	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=12.141;DP=658;FS=2.439;HRun=2;HaplotypeScore=82.8924;InbreedingCoeff=0.9998;MQ=90.95;MQ0=4;MQRankSum=-5.077;QD=43.78;ReadPosRankSum=5.325;VQSLOD=4.9009;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,114,2164	1/1:0,9:9:27.09:440,27,0	0/0:29,0:29:87.20:0,87,1596	0/0:27,0:27:59.45:0,59,1348	0/0:27,0:27:81.24:0,81,1552	1/1:0,18:17:42.14:682,42,0	1/1:0,19:19:48.16:783,48,0	1/1:0,26:26:75.22:1166,75,0	1/1:0,28:28:78.27:1268,78,0	0/0:36,0:36:99:0,105,2122	0/0:22,0:22:60.16:0,60,1175	1/1:0,21:21:56.93:928,57,0	0/0:26,0:26:75.24:0,75,1475	1/1:0,16:16:42.14:685,42,0	1/1:0,25:25:66.23:1076,66,0	1/1:0,22:21:60.20:978,60,0	1/1:0,28:27:72.25:1173,72,0	0/0:35,0:35:99:0,105,2052	1/1:0,11:11:33.10:514,33,0	1/1:0,13:13:36.12:587,36,0	1/1:0,29:29:84.29:1369,84,0	1/1:0,17:17:48.16:780,48,0	0/0:12,0:12:36.12:0,36,728	0/0:24,0:24:72.24:0,72,1427	1/1:0,24:24:66.23:1076,66,0	1/1:0,33:33:93.28:1478,93,0	1/1:0,26:26:66.22:1065,66,0	1/1:1,15:15:39.13:635,39,0
chr10	68457471	.	C	CT	336.69	PASS	AB=1.000;AC=9;AF=0.173;AN=52;BaseQRankSum=3.366;DP=451;FS=0.944;HRun=7;HaplotypeScore=67.3560;InbreedingCoeff=0.6765;MQ=41.98;MQ0=20;MQRankSum=-3.850;QD=4.37;ReadPosRankSum=-1.083;VQSLOD=-0.5841;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:41:81.02:0,81,757	0/1:2,0:1:0:0,0,0	./.	./.	0/0:20,0:19:29.84:0,30,282	0/0:16,0:16:29.99:0,30,289	0/1:16,0:12:1.35:1,0,23	0/0:31,0:30:51.04:0,51,491	0/0:9,0:9:9.01:0,9,87	1/1:13,6:19:18.53:216,19,0	1/1:6,8:15:22.27:234,22,0	0/0:16,0:15:17.72:0,18,172	0/0:18,0:17:23.11:0,23,230	0/0:10,0:8:4.35:0,4,105	0/0:19,0:17:22.81:0,23,228	0/0:14,0:14:21.03:0,21,203	0/0:23,0:20:29.98:0,30,338	1/1:11,3:11:1.55:4,2,0	0/0:23,0:22:28.37:0,28,309	0/0:11,0:9:18.03:0,18,174	0/1:11,0:8:0.03:0,0,0	0/0:13,0:11:15.01:0,15,145	0/0:21,0:21:41.05:0,41,373	0/0:19,0:19:29.64:0,30,279	0/0:10,0:9:5.54:0,6,56	0/0:16,0:14:33:0,33,312	0/0:17,0:17:32.93:0,33,310	0/0:15,0:12:14.99:0,15,142
chr10	68457607	.	GT	G	10520.71	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=7.657;DP=507;FS=5.319;HRun=1;HaplotypeScore=55.4109;InbreedingCoeff=0.9546;MQ=79.71;MQ0=0;MQRankSum=-5.395;QD=34.49;ReadPosRankSum=2.841;VQSLOD=4.7416;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,128,2002	1/1:0,4:4:12.04:168,12,0	0/0:21,0:21:63.15:0,63,946	0/0:21,0:21:60.15:0,60,906	0/0:27,0:27:81.25:0,81,1261	1/1:0,15:15:27.09:377,27,0	1/1:0,18:18:42.14:586,42,0	1/1:0,31:31:90.24:1215,90,0	1/1:0,21:21:42.14:586,42,0	0/0:15,0:15:45.15:0,45,698	0/0:11,0:11:33.11:0,33,527	1/1:0,19:19:51.17:709,51,0	0/0:21,0:21:60.17:0,60,931	1/1:0,11:11:27.09:377,27,0	1/1:0,12:12:27.09:375,27,0	1/1:0,10:10:27.09:376,27,0	1/1:0,30:30:78.26:1089,78,0	1/1:0,14:14:36.12:502,36,0	1/1:0,12:12:36.12:503,36,0	1/1:0,20:20:48.01:621,48,0	1/1:0,33:33:84.28:1173,84,0	1/1:0,4:4:9.03:126,9,0	0/0:11,0:11:30.10:0,30,478	0/0:28,0:28:84.23:0,84,1289	1/1:0,16:16:39.13:544,39,0	1/1:1,16:17:3.21:608,3,0	1/1:0,14:14:30.10:419,30,0	1/1:0,4:4:12.04:167,12,0
chr10	68457825	.	A	AGAGAG	5202.21	PASS	AB=0.975;AC=21;AF=0.375;AN=56;BaseQRankSum=4.694;DP=438;FS=101.207;HRun=0;HaplotypeScore=116.2319;InbreedingCoeff=-0.3129;MQ=46.83;MQ0=26;MQRankSum=-8.096;QD=21.86;ReadPosRankSum=10.354;VQSLOD=0.3638;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:38.79:0,39,545	0/1:9,0:9:68.43:214,0,68	0/0:49,0:14:35.12:0,35,461	0/0:31,0:11:22.69:0,23,190	0/0:33,0:32:76.38:0,76,1113	0/1:15,0:12:30.75:448,0,31	0/1:10,0:9:27.35:52,0,27	0/1:25,0:26:99:264,0,101	0/1:9,0:8:43.67:250,0,44	0/0:18,0:17:22.41:0,22,85	0/0:7,0:6:14.94:0,15,60	0/1:8,0:8:82.01:82,0,184	0/0:17,0:17:48.16:0,48,878	0/1:10,0:10:44.53:345,0,45	0/1:11,0:10:99:229,0,105	1/1:9,0:7:18.06:371,18,0	0/1:13,1:12:82.70:222,0,83	1/1:10,0:9:7.91:268,8,0	0/1:22,1:21:99:649,0,126	0/1:6,0:6:89.26:90,0,89	0/1:6,0:6:36.87:37,0,97	0/1:7,1:6:55.55:185,0,56	0/0:18,0:17:48.06:0,48,728	0/0:13,0:13:29.75:0,30,514	0/1:11,1:11:99:276,0,113	0/1:16,1:16:75.10:486,0,75	0/1:22,0:18:62.34:658,0,62	0/1:12,0:11:76.21:76,0,252
chr10	68457827	.	A	AGAGAGAG	10252.07	PASS	AB=0.853;AC=32;AF=0.571;AN=56;BaseQRankSum=-1.145;DP=450;FS=58.027;HRun=0;HaplotypeScore=128.2453;InbreedingCoeff=0.2275;MQ=46.31;MQ0=24;MQRankSum=-6.083;QD=36.88;ReadPosRankSum=9.037;VQSLOD=2.0751;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:28.93:0,29,532	0/1:4,3:7:6.37:383,0,6	0/0:49,0:15:33.48:0,33,556	0/0:31,0:11:21.92:0,22,233	0/0:32,0:31:69.31:0,69,1217	1/1:8,6:13:8.25:771,8,0	1/1:3,0:10:3.83:111,4,0	1/1:27,0:28:5.15:580,5,0	1/1:6,3:8:0.17:456,0,0	1/1:18,0:17:16.30:99,16,0	0/1:10,0:9:0.46:24,0,0	0/1:9,0:9:77.02:122,0,77	0/0:17,0:17:50.96:0,51,1003	1/1:5,5:10:5.28:619,5,0	0/1:8,3:11:18.93:368,0,19	1/1:3,6:7:18.06:601,18,0	1/1:14,1:13:10.12:545,10,0	1/1:8,0:8:14.86:412,15,0	0/1:11,10:22:9.47:1390,0,9	0/1:6,0:6:23.65:199,0,24	0/1:4,2:6:32.24:60,0,32	0/1:7,2:8:8.67:433,0,9	0/0:17,0:16:36.71:0,37,693	0/0:12,0:12:30.05:0,30,639	0/1:11,2:12:38.44:455,0,38	1/1:18,6:23:20.42:1388,20,0	1/1:16,3:18:20.81:1055,21,0	0/1:11,0:11:58.07:181,0,58
chr10	68457862	.	AGAAT	A	8857.57	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=9.505;DP=393;FS=0.916;HRun=0;HaplotypeScore=97.0995;InbreedingCoeff=0.9679;MQ=66.87;MQ0=2;MQRankSum=-8.425;QD=36.15;ReadPosRankSum=1.246;VQSLOD=4.4806;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:30.10:0,30,746	1/1:1,9:10:21.07:356,21,0	0/0:23,0:18:34.86:0,35,876	0/0:19,0:17:23.84:0,24,523	0/0:16,0:16:42.14:0,42,1047	1/1:4,16:20:39.13:665,39,0	1/1:2,3:5:9.03:152,9,0	1/1:9,12:21:33.11:539,33,0	1/1:3,8:11:21.07:358,21,0	0/0:20,0:20:57.19:0,57,1363	0/0:18,0:18:48.16:0,48,1175	1/1:1,5:6:18.06:306,18,0	0/0:16,0:16:42.14:0,42,1016	1/1:0,9:9:27.09:459,27,0	1/1:2,8:10:15.05:256,15,0	1/1:3,4:7:15.05:256,15,0	1/1:4,11:15:27.09:460,27,0	1/1:2,14:16:33.11:534,33,0	1/1:6,7:13:21.07:358,21,0	1/1:0,17:17:39.13:663,39,0	1/1:0,5:5:9.03:153,9,0	1/1:0,14:14:33.11:559,33,0	0/0:14,0:14:30.10:0,30,722	0/0:10,0:10:24.08:0,24,595	1/1:2,4:6:12.04:205,12,0	1/1:3,22:25:66.22:1102,66,0	1/1:3,21:24:54.18:918,54,0	1/1:0,11:11:33.11:559,33,0
chr10	68457969	.	C	CAGCTCTTT	26418.42	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-6.889;DP=438;FS=27.224;HRun=0;HaplotypeScore=99.0773;InbreedingCoeff=0.9312;MQ=72.47;MQ0=0;MQRankSum=-14.721;QD=94.35;ReadPosRankSum=-1.573;VQSLOD=3.0065;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:63.22:0,63,1663	1/1:4,2:6:12.04:427,12,0	0/0:16,0:16:27.09:0,27,645	0/0:16,0:16:42.12:0,42,816	0/0:26,0:26:75.26:0,75,1994	1/1:6,12:17:48.16:1885,48,0	1/1:7,5:12:27.09:1053,27,0	1/1:24,9:35:84.23:3044,84,0	1/1:4,5:9:21.07:891,21,0	0/0:28,0:28:81.27:0,81,2136	0/0:10,0:10:21.07:0,21,560	1/1:7,8:15:33.11:1419,33,0	0/0:6,0:6:15.05:0,15,407	1/1:3,3:6:15.05:574,15,0	1/1:3,7:14:24.08:857,24,0	1/1:2,4:6:18.06:707,18,0	1/1:1,1:3:3.01:129,3,0	0/0:15,0:15:36.10:0,36,872	1/1:15,6:25:57.14:1916,57,0	1/1:7,24:31:81.28:3481,81,0	1/1:2,1:4:6.02:169,6,0	1/1:5,8:15:39.09:1386,39,0	0/0:16,0:16:42.14:0,42,1097	0/0:3,0:3:6.02:0,6,163	1/1:8,13:23:54.18:2222,54,0	1/1:5,15:20:54.17:2220,54,0	1/1:9,14:23:57.20:2232,57,0	1/1:0,14:14:42.14:1807,42,0
chr10	68458861	.	TTC	T	3218.15	PASS	AB=0.960;AC=24;AF=0.429;AN=56;BaseQRankSum=-4.758;DP=502;FS=3.060;HRun=0;HaplotypeScore=112.6897;InbreedingCoeff=-0.0174;MQ=67.78;MQ0=13;MQRankSum=-0.495;QD=10.12;ReadPosRankSum=1.140;VQSLOD=3.6241;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:32:56.86:0,57,644	0/1:7,1:8:55:92,0,55	0/0:23,0:15:38.87:0,39,331	0/0:27,0:21:43.79:0,44,418	0/0:16,0:13:16.78:0,17,165	0/1:17,1:17:24.19:137,0,24	0/1:17,2:19:41.62:184,0,42	1/1:24,0:23:62.56:557,63,0	0/1:18,0:18:60.70:61,0,84	0/0:19,0:19:50.83:0,51,458	0/0:7,0:7:12.01:0,12,133	0/1:17,1:17:1.70:182,0,2	0/0:26,0:25:23.37:0,23,410	1/1:15,3:18:28.15:264,28,0	0/1:12,0:12:52.32:69,0,52	1/1:15,5:17:35.35:317,35,0	0/1:23,0:23:99:151,0,105	1/1:13,1:14:35.63:282,36,0	0/1:20,0:18:49.19:255,0,49	0/1:19,0:19:99:143,0,107	0/1:28,0:28:22.23:151,0,22	0/1:7,2:9:23.26:100,0,23	0/0:7,0:7:2.95:0,3,159	0/0:25,0:25:51.05:0,51,664	1/1:8,0:7:8.98:73,9,0	0/1:24,2:25:99:318,0,107	0/1:13,0:13:31.02:31,0,47	0/1:3,0:3:11.88:34,0,12
chr10	68458865	.	CTG	C	125.70	PASS	AB=0.938;AC=11;AF=0.212;AN=52;BaseQRankSum=2.832;DP=556;FS=4.394;HRun=0;HaplotypeScore=138.5923;InbreedingCoeff=0.2358;MQ=60.16;MQ0=19;MQRankSum=1.658;QD=0.96;ReadPosRankSum=1.592;VQSLOD=2.4893;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,2:39:20.99:0,21,379	0/0:11,0:11:0.06:0,0,156	./.	./.	1/1:11,1:12:5.85:47,6,0	0/0:18,0:17:14.99:0,15,168	0/0:24,0:24:7.99:0,8,213	0/0:30,0:28:15.59:0,16,96	0/0:20,0:20:18.04:0,18,227	0/0:24,0:23:9.22:0,9,99	0/0:7,0:7:5.50:0,6,38	0/0:16,0:15:6.02:0,6,80	0/1:25,1:24:7.09:7,0,259	1/1:19,0:18:7.87:53,8,0	0/1:16,0:16:0.49:0,0,158	0/1:22,0:19:19.52:39,0,20	0/0:26,0:26:24.08:0,24,324	1/1:13,0:13:8.56:51,9,0	0/0:26,0:24:31.14:0,31,322	0/0:20,0:19:12.21:0,12,322	0/0:32,0:31:3.09:0,3,177	0/1:12,0:11:8.92:9,0,71	0/1:5,3:8:54.72:55,0,62	0/0:24,0:23:24.08:0,24,363	0/0:12,0:11:2.97:0,3,21	0/0:31,0:30:15.39:0,15,389	0/0:16,0:16:8.81:0,9,124	0/0:3,0:3:3.01:0,3,45
chr10	68458899	.	G	GTC	2318.37	PASS	AB=0.976;AC=25;AF=0.446;AN=56;BaseQRankSum=9.357;DP=558;FS=46.846;HRun=0;HaplotypeScore=141.8399;InbreedingCoeff=-0.0979;MQ=47.80;MQ0=30;MQRankSum=0.089;QD=5.80;ReadPosRankSum=-0.374;VQSLOD=1.1164;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:35:44.54:0,45,609	0/1:10,0:10:24.39:79,0,24	0/0:10,0:3:6.01:0,6,56	0/0:17,0:11:21.77:0,22,205	0/1:12,0:10:15.12:15,0,101	0/1:19,0:17:99:107,0,118	0/1:25,0:25:99:185,0,164	0/1:39,0:33:37.43:289,0,37	0/1:19,0:18:87.14:87,0,114	1/1:16,0:15:11.13:217,11,0	0/0:8,0:8:4.99:0,5,17	0/1:13,0:12:59.96:60,0,65	0/0:25,1:24:47.81:0,48,507	1/1:13,0:11:10.87:78,11,0	0/1:18,0:18:67.95:68,0,118	1/1:15,3:15:35.71:315,36,0	0/1:29,0:27:99:141,0,262	0/1:14,0:13:0.31:115,0,0	0/1:24,0:23:99:110,0,226	0/1:32,0:31:54.02:54,0,254	0/1:15,14:29:39.64:40,0,171	0/1:20,0:19:28.50:30,0,29	0/0:12,0:12:25.78:0,26,207	0/0:27,1:27:59.96:0,60,647	1/1:13,0:13:17.98:161,18,0	0/1:29,1:29:99:269,0,205	0/0:20,0:20:9.01:0,9,119	1/1:6,0:5:10.99:78,11,0
chr10	68458928	.	T	TGTCTGTCA	10331.66	PASS	AB=0.840;AC=37;AF=0.661;AN=56;BaseQRankSum=5.647;DP=614;FS=16.088;HRun=0;HaplotypeScore=198.7969;InbreedingCoeff=0.7462;MQ=58.89;MQ0=12;MQRankSum=-2.335;QD=24.96;ReadPosRankSum=-0.584;VQSLOD=3.3170;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:27:63.14:0,63,1288	1/1:7,2:10:20.81:513,21,0	0/0:27,0:16:41.95:0,42,592	0/0:25,0:20:48.98:0,49,875	0/0:24,0:24:59.86:0,60,683	1/1:25,0:24:47.38:637,47,0	1/1:21,0:21:33.08:667,33,0	0/1:31,0:29:99:137,0,327	1/1:16,2:18:38.92:720,39,0	1/1:17,0:18:50.98:845,51,0	0/0:0,0:15:0.47:0,0,1	1/1:9,0:9:18.02:301,18,0	0/0:29,0:29:77.95:0,78,1219	1/1:13,0:12:20.78:226,21,0	1/1:16,0:16:26.67:320,27,0	1/1:15,0:16:45.08:780,45,0	1/1:27,1:27:62.64:934,63,0	0/1:16,0:15:43.67:144,0,44	1/1:24,0:24:66.14:1051,66,0	1/1:4,25:36:5.65:161,6,0	1/1:28,0:27:29.98:290,30,0	1/1:3,15:20:5.61:186,6,0	0/0:23,0:23:66.03:0,66,951	0/0:29,0:29:69.15:0,69,1512	1/1:17,0:17:33.06:596,33,0	1/1:28,2:30:84.04:1389,84,0	0/1:2,22:26:0.27:0,0,0	1/1:10,0:10:29.99:434,30,0
chr10	68459039	.	TTTTTTTC	T	2180.43	PASS	AB=0.968;AC=19;AF=0.339;AN=56;BaseQRankSum=10.298;DP=557;FS=34.066;HRun=0;HaplotypeScore=146.8466;InbreedingCoeff=-0.2857;MQ=54.53;MQ0=26;MQRankSum=-3.265;QD=7.37;ReadPosRankSum=5.464;VQSLOD=1.2372;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:38:79.56:0,80,1532	0/1:6,0:5:21.77:104,0,22	0/0:41,0:7:3.29:0,3,25	0/0:29,0:12:6.12:0,6,230	0/0:34,0:32:64.69:0,65,970	0/1:14,0:14:23.87:45,0,24	0/1:15,4:19:3.75:354,0,4	0/1:21,0:21:45.62:46,0,87	0/1:14,0:14:50.81:102,0,51	0/0:15,0:12:27.04:0,27,450	0/0:17,0:14:32.71:0,33,525	0/1:12,1:12:51.59:147,0,52	0/0:16,0:16:32.97:0,33,698	0/1:9,0:9:29.21:29,0,46	0/1:14,1:14:3.39:187,0,3	0/1:22,1:19:44.36:228,0,44	0/1:23,1:23:84.39:147,0,84	0/0:14,0:13:9.22:0,9,192	0/1:25,0:21:47.82:48,0,107	0/1:20,0:20:18.35:113,0,18	0/1:10,0:9:1.88:2,0,87	0/1:12,0:11:5.71:6,0,33	0/0:20,0:20:44.63:0,45,729	0/0:36,0:35:68.22:0,68,1532	0/1:12,0:11:36.39:114,0,36	0/1:24,0:21:80.11:177,0,80	0/1:19,4:20:41.30:268,0,41	1/1:11,1:12:17.95:225,18,0
chr10	68459667	.	T	TTC	12283.93	PASS	AB=0.538;AC=33;AF=0.589;AN=56;BaseQRankSum=-2.935;DP=465;FS=5.757;HRun=0;HaplotypeScore=63.0467;InbreedingCoeff=0.9406;MQ=73.17;MQ0=1;MQRankSum=-2.422;QD=45.00;ReadPosRankSum=2.175;VQSLOD=6.2610;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:84.28:0,84,1204	1/1:1,10:11:30.10:550,30,0	0/0:14,0:14:33.11:0,33,451	0/0:11,0:11:27.09:0,27,375	0/0:24,0:24:66.22:0,66,938	1/1:0,16:16:27.09:478,27,0	1/1:1,13:14:36.12:660,36,0	0/0:29,0:29:75.22:0,75,1025	1/1:0,10:10:24.08:440,24,0	0/0:15,0:15:45.15:0,45,643	0/0:14,0:14:33.06:0,33,431	1/1:1,12:13:33.11:605,33,0	0/0:9,0:9:27.07:0,27,352	1/1:3,16:19:45.15:825,45,0	1/1:2,8:10:24.08:422,24,0	1/1:1,12:13:30.10:549,30,0	1/1:1,32:32:78.27:1413,78,0	0/0:14,0:14:42.14:0,42,602	1/1:2,16:18:48.13:845,48,0	1/1:0,16:17:45.15:808,45,0	1/1:0,20:20:57.20:1045,57,0	1/1:0,4:4:12.04:219,12,0	0/0:6,0:6:18.03:0,18,236	0/0:27,0:27:81.25:0,81,1141	1/1:1,18:20:54.19:990,54,0	0/1:2,12:14:3.89:566,0,4	1/1:2,29:31:72.25:1319,72,0	1/1:0,10:10:30.10:550,30,0
chr10	68459802	.	ATC	A	4308.99	PASS	AB=0.704;AC=36;AF=0.643;AN=56;BaseQRankSum=12.616;DP=484;FS=10.537;HRun=0;HaplotypeScore=171.0325;InbreedingCoeff=0.7549;MQ=55.84;MQ0=4;MQRankSum=-10.989;QD=13.77;ReadPosRankSum=-1.566;VQSLOD=3.9984;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:51.15:0,51,943	1/1:3,6:9:11.01:76,11,0	0/0:25,0:20:45.88:0,46,819	0/0:14,0:14:41.80:0,42,716	0/0:20,0:19:54.18:0,54,1009	1/1:10,10:20:17.26:168,17,0	1/1:2,9:11:1.30:49,1,0	1/1:1,21:22:59.96:703,60,0	1/1:8,4:12:20.53:189,21,0	0/0:28,0:27:81.28:0,81,1529	0/0:15,0:15:42.14:0,42,800	0/1:10,4:14:11.01:74,0,11	0/0:15,0:15:45.15:0,45,868	1/1:14,11:25:26.01:273,26,0	1/1:13,14:27:21.29:199,21,0	1/1:10,6:16:13.76:214,14,0	1/1:9,4:13:11.51:100,12,0	1/1:9,3:12:23.28:242,23,0	1/1:9,7:17:37.79:435,38,0	1/1:9,9:18:10.73:109,11,0	1/1:6,6:12:9.34:106,9,0	1/1:14,2:16:5.79:63,6,0	0/0:9,0:9:27.09:0,27,506	0/0:21,0:20:51.15:0,51,933	1/1:14,4:18:18.15:182,18,0	0/1:7,10:16:11.67:402,0,12	1/1:22,11:33:72.91:721,73,0	1/1:1,0:1:1.25:3,1,0
chr10	68459806	.	ATT	A	1997.54	PASS	AB=0.799;AC=23;AF=0.411;AN=56;BaseQRankSum=5.545;DP=488;FS=3.884;HRun=3;HaplotypeScore=178.7998;InbreedingCoeff=-0.0241;MQ=52.63;MQ0=5;MQRankSum=-6.319;QD=6.49;ReadPosRankSum=0.762;VQSLOD=0.1604;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:24:47.11:0,47,687	0/1:4,5:9:33.65:35,0,34	0/0:22,0:16:35.09:0,35,435	0/0:15,0:14:35.96:0,36,406	0/0:24,0:23:47.75:0,48,866	0/1:14,5:19:27.56:70,0,28	1/1:9,1:10:0.62:31,1,0	1/1:18,3:20:50.36:357,50,0	0/1:8,3:11:23.90:77,0,24	0/0:30,0:29:83.44:0,83,1146	0/0:15,0:15:42.01:0,42,522	0/1:13,1:14:31.54:32,0,73	0/0:17,0:17:47.91:0,48,751	0/1:23,4:27:78.34:111,0,78	0/1:19,8:27:73:73,0,90	0/1:13,4:17:64.91:102,0,65	0/1:11,3:14:30.21:54,0,30	1/1:11,0:12:20.80:177,21,0	1/1:15,1:15:25.88:277,26,0	0/1:8,8:16:45.41:45,0,46	1/1:12,1:13:8.24:66,8,0	0/1:13,2:15:10.55:20,0,11	0/0:9,0:9:19.36:0,19,391	0/0:23,0:22:49.43:0,49,768	0/1:13,3:16:40.45:50,0,40	0/1:11,6:16:34.76:270,0,35	0/1:27,6:34:56.55:332,0,57	0/0:1,0:1:2.88:0,3,15
chr10	68459838	.	G	GTC	3705.56	PASS	AB=0.843;AC=40;AF=0.714;AN=56;BaseQRankSum=9.959;DP=604;FS=12.294;HRun=0;HaplotypeScore=222.7495;InbreedingCoeff=0.7589;MQ=42.11;MQ0=16;MQRankSum=-8.573;QD=7.75;ReadPosRankSum=0.649;VQSLOD=1.9794;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:57.97:0,58,624	1/1:12,0:12:16.81:85,17,0	0/0:9,0:4:9:0,9,89	0/0:12,0:8:17.64:0,18,130	0/0:22,1:22:27.38:0,27,679	1/1:23,0:23:20.17:105,20,0	1/1:21,0:21:11.66:146,12,0	1/1:39,0:36:31.70:442,32,0	1/1:21,0:21:19.14:148,19,0	0/1:20,16:34:99:211,0,307	0/1:22,0:20:47.02:47,0,220	1/1:23,0:23:5.89:108,6,0	0/0:16,0:16:24.41:0,24,531	1/1:31,0:31:37.87:209,38,0	1/1:23,0:23:29.94:137,30,0	1/1:20,0:20:23.81:197,24,0	1/1:18,0:17:23.50:123,23,0	1/1:18,0:18:39.50:289,39,0	1/1:20,0:17:33.28:222,33,0	1/1:23,0:23:22.54:133,23,0	1/1:20,0:18:16.83:126,17,0	1/1:22,0:22:11.02:80,11,0	0/0:12,0:12:29.93:0,30,357	0/0:24,0:24:20.19:0,20,610	1/1:21,0:20:18.46:94,18,0	1/1:25,0:24:20.96:341,21,0	1/1:37,0:37:78.82:431,79,0	1/1:2,0:2:5.48:31,5,0
chr10	68460298	.	G	GA	11099.80	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=12.913;DP=597;FS=1.576;HRun=7;HaplotypeScore=75.5099;InbreedingCoeff=0.9763;MQ=60.80;MQ0=4;MQRankSum=-0.496;QD=29.13;ReadPosRankSum=0.905;VQSLOD=5.3976;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:48.04:0,48,463	1/1:0,11:11:33.10:395,33,0	0/0:25,0:11:9.88:0,10,142	0/0:30,0:9:6.52:0,7,116	0/0:33,0:33:90.14:0,90,869	1/1:2,17:19:45.14:543,45,0	1/1:1,24:25:60.18:725,60,0	1/1:9,11:19:54.14:610,54,0	1/1:4,10:14:36.10:425,36,0	0/0:34,0:34:93.15:0,93,898	0/0:20,0:20:51.08:0,51,492	1/1:1,10:11:24.07:289,24,0	0/0:18,0:18:51.08:0,51,492	1/1:1,15:16:39.12:471,39,0	1/1:1,21:22:63.19:761,63,0	1/1:0,10:10:24.07:290,24,0	1/1:5,23:28:63.19:761,63,0	1/1:16,0:16:35.63:243,36,0	1/1:1,22:22:63.19:756,63,0	1/1:2,23:25:57.13:671,57,0	1/1:3,12:15:27.08:326,27,0	1/1:3,14:17:36.11:431,36,0	0/0:15,0:15:42.07:0,42,405	0/0:23,0:23:60.04:0,60,567	1/1:1,32:33:81.25:977,81,0	1/1:1,27:28:81.25:976,81,0	1/1:5,28:33:81.25:979,81,0	1/1:1,14:15:39.12:471,39,0
chr10	68460302	.	A	AG	2711.16	PASS	AB=1.000;AC=31;AF=0.554;AN=56;BaseQRankSum=14.563;DP=586;FS=0.000;HRun=0;HaplotypeScore=105.1004;InbreedingCoeff=0.5249;MQ=61.93;MQ0=3;MQRankSum=0.743;QD=7.23;ReadPosRankSum=4.971;VQSLOD=3.2057;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:51.12:0,51,689	1/1:11,0:11:27.54:106,28,0	0/0:20,0:10:17.29:0,17,233	0/0:32,0:10:20.98:0,21,244	0/0:34,0:34:99:0,102,1363	1/1:18,0:18:13.96:119,14,0	1/1:24,0:24:50.83:202,51,0	1/1:21,0:20:3.44:130,3,0	0/1:14,0:14:20.44:67,0,20	0/0:33,0:33:99:0,99,1345	0/0:18,0:18:54.17:0,54,740	0/1:12,0:12:1.32:51,0,1	0/0:20,0:20:57.15:0,57,760	1/1:16,0:16:31.55:113,32,0	1/1:21,0:21:52.06:199,52,0	1/1:10,0:10:19.47:73,19,0	0/1:27,0:27:32.31:137,0,32	1/1:1,15:16:36.12:539,36,0	1/1:22,0:22:52.74:209,53,0	0/1:25,0:25:14.23:129,0,14	0/1:15,0:15:38.88:60,0,39	0/1:16,0:16:45.77:70,0,46	0/0:15,0:15:42.14:0,42,585	0/0:22,0:22:66.20:0,66,887	1/1:34,0:34:16.65:180,17,0	1/1:28,0:28:39.62:211,40,0	1/1:29,0:29:45.06:229,45,0	0/1:16,0:16:1.86:92,0,2
chr10	68460306	.	G	GA	450.32	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-2.154;DP=572;FS=4.439;HRun=7;HaplotypeScore=114.6690;InbreedingCoeff=0.8991;MQ=62.97;MQ0=3;MQRankSum=-2.977;QD=22.52;ReadPosRankSum=-2.783;VQSLOD=1.6793;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:48.09:0,48,478	0/0:11,0:11:28.35:0,28,142	0/0:18,0:9:18.50:0,19,181	0/0:33,0:11:15.19:0,15,131	0/0:33,0:33:96.21:0,96,978	0/0:16,0:16:32.42:0,32,180	0/0:26,0:26:54.92:0,55,279	1/1:5,15:19:45.14:545,45,0	0/0:12,0:12:26.72:0,27,144	0/0:32,0:32:90.20:0,90,914	0/0:18,0:18:48.10:0,48,487	0/0:11,0:11:7.40:0,7,133	0/0:19,0:19:57.13:0,57,581	0/0:17,0:17:36.94:0,37,181	0/0:21,0:21:53.94:0,54,264	0/0:10,0:10:21.52:0,22,111	0/0:24,0:24:62.57:0,63,318	0/0:14,0:14:29.99:0,30,266	0/0:24,0:24:62.13:0,62,382	0/0:23,0:23:46.08:0,46,256	0/0:13,0:13:23.31:0,23,116	0/0:16,0:16:40.22:0,40,244	0/0:16,0:16:42.09:0,42,427	0/0:19,0:19:54.12:0,54,551	0/0:35,0:35:81.08:0,81,470	0/0:29,0:29:76.28:0,76,499	0/0:30,0:30:79.05:0,79,384	0/0:14,0:14:38.48:0,38,196
chr10	68460367	.	GGT	G	1552.13	PASS	AB=0.991;AC=36;AF=0.750;AN=48;BaseQRankSum=3.549;DP=523;FS=0.840;HRun=0;HaplotypeScore=87.3248;InbreedingCoeff=0.1527;MQ=68.51;MQ0=18;MQRankSum=-0.086;QD=4.08;ReadPosRankSum=0.016;VQSLOD=2.1385;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:22:11.59:0,12,86	1/1:12,0:12:6:57,6,0	./.	./.	0/1:22,0:22:13:13,0,81	1/1:16,3:21:26.72:240,27,0	1/1:19,4:24:20.89:207,21,0	./.	1/1:15,3:18:14.62:132,15,0	1/1:17,0:22:3.73:16,4,0	./.	1/1:10,0:10:6.01:65,6,0	0/0:17,0:17:6.02:0,6,86	1/1:10,0:11:5.85:46,6,0	0/1:13,0:12:12.99:13,0,101	1/1:9,3:13:11.86:111,12,0	1/1:11,9:19:29.65:305,30,0	1/1:9,0:9:2.84:14,3,0	1/1:24,0:20:6:57,6,0	0/1:16,0:17:8.11:8,0,35	1/1:18,1:17:3.01:32,3,0	1/1:13,0:13:5.86:37,6,0	0/0:21,0:21:6.76:0,7,198	0/1:25,0:25:22.78:23,0,246	0/1:19,0:19:11.30:41,0,11	1/1:21,0:20:5.83:39,6,0	1/1:21,2:23:14.81:122,15,0	0/1:21,0:18:20.29:121,0,20
chr10	68460595	.	TTGAATGAATGAA	T	1112.97	PASS	AC=4;AF=0.074;AN=54;BaseQRankSum=5.490;DP=605;FS=8.107;HRun=0;HaplotypeScore=209.7816;InbreedingCoeff=0.9019;MQ=60.92;MQ0=12;MQRankSum=-3.858;QD=38.38;ReadPosRankSum=0.668;VQSLOD=2.4987;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:34:63.22:0,63,3315	0/0:12,0:12:24.08:0,24,1291	./.	0/0:25,0:17:5.98:0,6,61	0/0:17,0:17:42.14:0,42,2439	0/0:33,0:34:72.25:0,72,4089	0/0:22,0:22:45.12:0,45,2361	0/0:24,0:29:24.08:0,24,636	0/0:23,0:23:51.16:0,51,2679	1/1:9,11:20:30.10:916,30,0	1/1:5,4:9:9.03:310,9,0	0/0:20,0:20:45.15:0,45,2454	0/0:10,0:10:18.06:0,18,911	0/0:14,0:14:33.11:0,33,1780	0/0:34,0:34:66.21:0,66,3541	0/0:15,0:15:30.09:0,30,1605	0/0:23,0:23:39.12:0,39,1883	0/0:7,0:15:24.08:0,24,1264	0/0:35,0:34:48.16:0,48,2539	0/0:25,0:26:36.12:0,36,1818	0/0:29,0:29:54.17:0,54,2832	0/0:24,0:23:42.14:0,42,1934	0/0:8,0:8:15.05:0,15,867	0/0:14,0:16:30.09:0,30,1408	0/0:26,0:26:57.20:0,57,3049	0/0:35,0:35:63.22:0,63,3344	0/0:20,0:20:39.13:0,39,2269	0/0:12,0:12:27.09:0,27,1320
chr10	68460737	.	AGTCTCCAGAATCTTGTCTT	A	606.65	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=4.396;DP=599;FS=0.000;HRun=0;HaplotypeScore=307.4665;InbreedingCoeff=0.9173;MQ=80.77;MQ0=0;MQRankSum=-0.709;QD=43.33;ReadPosRankSum=-1.085;VQSLOD=1.8139;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:45.15:0,45,3194	0/0:13,0:13:30.10:0,30,2262	0/0:19,0:20:55.04:0,55,2593	0/0:25,0:20:40.76:0,41,2648	0/0:7,0:7:15.94:0,16,1321	0/0:38,0:38:99:0,102,8235	0/0:32,0:32:84.29:0,84,7024	0/0:30,0:30:75.25:0,75,4678	0/0:29,0:29:84.29:0,84,6544	1/1:6,4:10:12.02:393,12,0	1/1:2,2:4:6.02:319,6,0	0/0:17,0:17:48.16:0,48,3911	0/0:11,0:11:30.10:0,30,2256	0/0:21,0:21:60.21:0,60,4901	0/0:49,0:49:99:0,138,11124	0/0:23,0:23:63.22:0,63,4929	0/0:24,0:24:72.25:0,72,5891	0/0:18,0:19:48.16:0,48,3649	0/0:25,0:25:66.22:0,66,4395	0/0:21,0:21:57.19:0,57,3720	0/0:36,0:36:99:0,99,7628	0/0:17,0:17:51.14:0,51,3205	0/0:12,0:12:30.10:0,30,1567	0/0:9,0:9:24.08:0,24,1782	0/0:27,0:27:75.26:0,75,5502	0/0:27,0:27:69.24:0,69,5688	0/0:16,0:15:36.12:0,36,2962	0/0:20,0:20:51.15:0,51,4142
chr10	68460947	.	G	GTCTGTC	15305.05	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=2.382;DP=673;FS=17.718;HRun=0;HaplotypeScore=198.0021;InbreedingCoeff=0.9629;MQ=67.09;MQ0=5;MQRankSum=-12.905;QD=32.91;ReadPosRankSum=-0.190;VQSLOD=3.3508;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:57.66:0,58,1185	1/1:5,7:12:21.03:415,21,0	0/0:38,0:33:40.20:0,40,651	0/0:50,0:42:61.32:0,61,1037	0/0:11,0:11:18.04:0,18,310	1/1:9,13:20:36.12:804,36,0	1/1:9,14:24:30.10:667,30,0	1/1:19,19:38:60.07:1306,60,0	1/1:10,19:29:51.06:955,51,0	0/0:16,0:16:27.09:0,27,579	0/0:9,0:9:18.01:0,18,280	1/1:14,20:33:51.09:1117,51,0	0/0:7,0:6:15.03:0,15,280	1/1:7,16:24:36.12:856,36,0	1/1:10,19:28:42.14:729,42,0	1/1:6,23:29:28.29:863,28,0	1/1:10,17:26:21.08:930,21,0	1/1:9,2:11:16.25:404,16,0	1/1:13,10:22:48.12:1345,48,0	1/1:6,18:24:39.13:746,39,0	1/1:28,2:28:17.51:322,18,0	1/1:12,19:31:38.22:684,38,0	0/0:14,0:14:32.95:0,33,575	0/0:34,0:34:80.85:0,81,1589	1/1:6,12:18:23.28:486,23,0	1/1:13,12:25:5.56:1468,6,0	1/1:8,13:21:33.11:908,33,0	1/1:5,4:9:9.03:300,9,0
chr10	68460977	.	CACTGTGTGTGTGTGTG	C	3984.81	PASS	AB=0.959;AC=16;AF=0.286;AN=56;BaseQRankSum=10.171;DP=626;FS=11.962;HRun=0;HaplotypeScore=294.7279;InbreedingCoeff=-0.2403;MQ=49.52;MQ0=19;MQRankSum=-6.791;QD=13.24;ReadPosRankSum=-1.792;VQSLOD=0.5389;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:37:74.21:0,74,2470	0/1:4,1:7:39.60:245,0,40	0/0:44,0:12:19.26:0,19,343	0/0:62,0:30:42.58:0,43,762	0/0:11,0:11:23.94:0,24,939	0/1:19,0:17:93.04:176,0,93	0/0:23,0:21:17.74:0,18,203	0/0:23,0:19:55.01:0,55,782	0/1:24,1:25:74.88:650,0,75	0/0:17,0:17:49.72:0,50,1315	0/0:9,0:9:14.84:0,15,459	0/1:26,1:24:99:535,0,155	0/0:18,0:16:38.75:0,39,1920	0/1:21,0:21:99:154,0,174	0/1:19,0:18:25.79:126,0,26	0/1:22,0:22:60.54:436,0,61	0/1:17,0:16:99:166,0,317	0/1:13,0:13:8.21:8,0,296	0/1:20,0:20:48.84:49,0,560	0/1:19,0:17:70.11:174,0,70	0/0:24,0:21:5.05:0,5,85	1/1:27,0:24:12.62:434,13,0	0/0:14,0:13:36.06:0,36,1508	0/0:36,0:36:87.53:0,88,3485	0/1:18,0:19:57.82:173,0,58	0/1:26,1:27:99:217,0,683	0/1:17,0:17:99:441,0,260	0/0:6,0:6:13.81:0,14,229
chr10	68460979	.	CTGTGTGTGTGTGTGTG	C	5663.71	PASS	AB=0.857;AC=26;AF=0.520;AN=50;BaseQRankSum=8.184;DP=627;FS=27.020;HRun=0;HaplotypeScore=282.2587;InbreedingCoeff=0.4927;MQ=49.30;MQ0=22;MQRankSum=-8.115;QD=19.20;ReadPosRankSum=-2.391;VQSLOD=2.3872;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:40:36.12:0,36,1926	1/1:7,0:7:9.03:269,9,0	./.	./.	0/0:10,0:12:12.51:0,13,713	1/1:16,3:17:6.49:262,6,0	./.	0/0:21,0:17:4.26:0,4,63	1/1:18,4:24:21.07:871,21,0	0/0:19,0:19:28.91:0,29,870	0/0:11,0:12:9.03:0,9,324	1/1:20,4:22:18.05:765,18,0	0/0:16,0:16:33.11:0,33,1782	0/1:19,1:21:18.44:233,0,18	1/1:16,1:17:6.02:200,6,0	1/1:16,4:21:14.66:633,15,0	1/1:15,1:14:6.02:242,6,0	0/1:10,0:13:14.60:15,0,146	0/1:21,1:21:5.66:123,0,6	1/1:17,1:17:6.02:242,6,0	0/0:23,0:20:0:0,0,0	1/1:21,3:23:18.06:620,18,0	0/0:14,0:13:24.08:0,24,1170	0/0:38,0:38:48.16:0,48,2536	1/1:17,2:19:5.49:202,5,0	1/1:24,1:26:4.21:366,4,0	0/1:13,5:18:36.54:621,0,37	0/0:7,0:6:3.01:0,3,86
chr10	68461220	.	A	AT	1657.15	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-4.728;DP=639;FS=0.000;HRun=1;HaplotypeScore=64.9821;InbreedingCoeff=0.9877;MQ=85.47;MQ0=0;MQRankSum=-1.159;QD=38.54;ReadPosRankSum=-2.399;VQSLOD=3.1481;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,129,1623	0/0:6,0:6:15.04:0,15,181	0/0:25,0:25:45.64:0,46,677	0/0:21,0:21:56.54:0,57,656	0/0:21,0:21:60.15:0,60,759	0/0:20,0:19:48.16:0,48,623	0/0:13,0:13:39.13:0,39,505	0/0:27,0:27:72.23:0,72,935	0/0:20,0:20:48.16:0,48,622	1/1:0,17:16:48.15:700,48,0	1/1:0,26:26:72.24:1079,72,0	0/0:32,0:32:90.29:0,90,1168	0/0:33,0:33:96.27:0,96,1214	0/0:18,0:18:54.18:0,54,700	0/0:29,0:28:84.27:0,84,1090	0/0:24,0:24:72.23:0,72,933	0/0:23,0:23:63.16:0,63,786	0/0:17,0:17:45.15:0,45,584	0/0:19,0:19:54.17:0,54,688	0/0:21,0:21:57.18:0,57,739	0/0:53,0:53:99:0,157,2023	0/0:19,0:19:54.16:0,54,685	0/0:21,0:21:63.18:0,63,790	0/0:16,0:16:45.12:0,45,567	0/0:20,0:20:51.17:0,51,662	0/0:23,0:23:66.21:0,66,843	0/0:24,0:24:72.23:0,72,934	0/0:6,0:6:18.06:0,18,234
chr10	68461633	.	TCCACGCGAGCGC	T	3226.07	PASS	AB=0.591;AC=25;AF=0.500;AN=50;BaseQRankSum=7.776;DP=412;FS=0.620;HRun=0;HaplotypeScore=166.4437;InbreedingCoeff=0.7000;MQ=82.81;MQ0=1;MQRankSum=-6.500;QD=18.33;ReadPosRankSum=0.949;VQSLOD=2.5272;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:84.23:0,84,4193	./.	0/0:22,0:22:48.91:0,49,888	0/0:19,0:17:20.30:0,20,671	0/0:11,0:11:33.11:0,33,1601	1/1:2,12:14:2.44:19,2,0	1/1:0,20:21:5.38:216,5,0	1/1:5,0:5:1.58:23,2,0	./.	0/0:11,0:11:33:0,33,626	0/0:9,0:9:10.84:0,11,182	1/1:3,12:15:8.99:315,9,0	0/0:10,0:10:30.10:0,30,1227	1/1:7,6:13:21.47:446,21,0	0/0:5,13:18:0.47:0,0,1	1/1:2,10:13:6.02:142,6,0	1/1:3,12:15:10.24:354,10,0	0/0:14,0:14:21.07:0,21,913	1/1:3,12:15:33.84:732,34,0	1/1:7,5:12:6.01:130,6,0	./.	0/0:1,10:11:0:0,0,0	0/0:11,0:11:33.10:0,33,1359	0/0:25,0:25:75.24:0,75,3537	1/1:3,14:17:2.41:17,2,0	0/1:4,9:13:2.19:450,0,2	1/1:3,17:21:10.41:540,10,0	1/1:2,0:2:3.40:18,3,0
chr10	68461636	.	A	ACGCGTGCACG	1138.94	PASS	AB=1.000;AC=8;AF=0.160;AN=50;BaseQRankSum=-2.927;DP=398;FS=7.220;HRun=0;HaplotypeScore=161.7312;InbreedingCoeff=0.5513;MQ=77.47;MQ0=4;MQRankSum=-3.183;QD=10.85;ReadPosRankSum=-0.031;VQSLOD=2.2224;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:75.24:0,75,2162	./.	0/0:18,0:17:14.02:0,14,247	0/0:18,0:16:14.29:0,14,178	0/0:13,0:12:33.07:0,33,829	0/1:14,0:14:0:0,0,0	0/0:21,0:21:5.65:0,6,101	0/1:3,0:3:0:0,0,0	./.	0/0:8,0:8:15.05:0,15,387	0/0:7,0:7:2.97:0,3,50	0/0:15,0:15:9.03:0,9,210	0/0:11,0:11:27.08:0,27,710	0/0:11,0:11:15.34:0,15,251	0/1:17,0:17:0:0,0,0	0/0:13,0:13:5.94:0,6,89	0/0:15,0:15:11.69:0,12,206	1/1:3,12:17:27.09:1229,27,0	0/0:15,0:15:26.74:0,27,391	0/0:12,0:12:3.44:0,3,39	0/1:27,0:26:0:0,0,0	0/1:11,0:11:0:0,0,0	0/0:10,0:10:24.07:0,24,615	0/0:24,0:24:66.17:0,66,1730	0/1:16,0:16:0:0,0,0	0/0:12,0:12:18.05:0,18,337	0/0:20,0:20:14.94:0,15,313	./.
chr10	68461639	.	CGA	C	702.04	PASS	AC=22;AF=0.500;AN=44;BaseQRankSum=7.858;DP=385;FS=0.000;HRun=0;HaplotypeScore=126.3351;InbreedingCoeff=0.7562;MQ=73.49;MQ0=10;MQRankSum=-5.390;QD=5.24;ReadPosRankSum=-0.346;VQSLOD=2.8477;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:75:0,75,955	./.	0/0:16,0:15:11.02:0,11,150	0/0:15,0:14:14.05:0,14,135	0/0:16,0:15:21.73:0,22,429	./.	1/1:21,0:21:5.68:40,6,0	1/1:1,0:1:3:25,3,0	./.	0/0:6,0:6:3.35:0,3,63	0/0:7,0:6:3:0,3,25	1/1:12,3:15:8.78:65,9,0	0/0:11,0:11:24.38:0,24,215	1/1:8,3:11:17.82:126,18,0	./.	1/1:12,1:13:5.77:33,6,0	1/1:12,3:15:10.06:82,10,0	0/0:13,0:13:26.31:0,26,180	1/1:13,1:14:35.18:228,35,0	1/1:8,2:10:5.87:40,6,0	./.	0/0:10,1:11:0:0,0,0	0/0:8,0:8:21.03:0,21,260	0/0:25,0:24:54.46:0,54,828	./.	1/1:11,1:11:19.11:123,19,0	1/1:19,1:20:14.62:87,15,0	1/1:2,0:1:2.98:22,3,0
chr10	68461641	.	AGCGCGC	A	1227.39	PASS	AC=20;AF=0.526;AN=38;BaseQRankSum=6.365;DP=382;FS=2.814;HRun=0;HaplotypeScore=136.2592;InbreedingCoeff=0.7822;MQ=70.04;MQ0=11;MQRankSum=-5.692;QD=9.30;ReadPosRankSum=2.171;VQSLOD=2.5892;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:31:69.20:0,69,1629	./.	0/0:14,0:13:6.90:0,7,90	0/0:14,0:13:8.86:0,9,96	0/0:17,0:15:35.82:0,36,787	./.	1/1:21,0:21:5.52:86,6,0	./.	./.	1/1:2,3:5:9.03:191,9,0	./.	1/1:15,0:15:8.97:126,9,0	0/0:12,0:12:18.15:0,18,213	1/1:10,0:10:9.50:129,10,0	./.	1/1:12,0:12:3.01:44,3,0	1/1:15,0:15:8.71:125,9,0	0/0:13,0:13:30.05:0,30,524	1/1:13,0:13:16.30:210,16,0	1/1:10,0:10:2.84:40,3,0	./.	0/0:11,0:11:0:0,0,0	0/0:9,0:8:23.98:0,24,408	0/0:25,0:24:54.19:0,54,1362	./.	1/1:12,0:11:15.05:226,15,0	1/1:19,0:19:14.88:206,15,0	./.
chr10	68461646	.	GCGCGCGCGCGCA	G	2153.88	PASS	AB=0.964;AC=19;AF=0.452;AN=42;BaseQRankSum=6.642;DP=407;FS=1.551;HRun=0;HaplotypeScore=158.3316;InbreedingCoeff=0.4992;MQ=63.95;MQ0=19;MQRankSum=-5.182;QD=14.36;ReadPosRankSum=2.515;VQSLOD=2.1462;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:30:72.25:0,72,3042	1/1:6,0:6:3.01:31,3,0	0/0:11,0:10:9.89:0,10,179	0/0:14,0:12:14.61:0,15,206	0/0:17,0:15:39.13:0,39,1733	./.	1/1:24,0:24:0.36:148,0,0	./.	./.	0/1:4,0:4:17.74:84,0,18	0/0:9,0:8:3.01:0,3,88	1/1:12,2:15:8.99:258,9,0	0/0:11,0:11:28.61:0,29,569	1/1:7,2:9:12.47:285,12,0	./.	1/1:12,1:13:3.48:79,3,0	1/1:17,2:19:9:253,9,0	0/0:17,0:17:42.14:0,42,1158	0/1:14,1:14:11.56:386,0,12	1/1:6,2:8:3.01:75,3,0	./.	0/0:8,0:9:0:0,0,0	0/0:11,0:10:27.09:0,27,918	0/0:26,0:25:59.42:0,59,2785	./.	1/1:14,0:13:17.79:353,18,0	0/1:20,1:20:4.48:353,0,4	./.
chr10	68461656	.	GCA	G	1022.74	PASS	AB=0.992;AC=38;AF=0.704;AN=54;BaseQRankSum=3.550;DP=485;FS=2.831;HRun=0;HaplotypeScore=149.8535;InbreedingCoeff=0.2403;MQ=48.31;MQ0=21;MQRankSum=0.897;QD=2.40;ReadPosRankSum=-0.581;VQSLOD=2.7748;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:31:33.53:34,0,50	1/1:7,0:7:2.99:23,3,0	./.	0/0:7,0:6:0:0,0,0	0/1:18,1:17:10.77:11,0,186	0/1:18,0:18:18.28:18,0,18	1/1:30,2:32:6.84:60,7,0	0/1:7,0:6:7.03:7,0,11	1/1:16,0:16:5.95:42,6,0	0/0:10,0:10:12.70:0,13,83	0/0:9,0:8:3:0,3,25	1/1:14,0:14:5.64:50,6,0	0/1:12,0:12:16.93:17,0,19	1/1:13,0:13:14.92:115,15,0	1/1:25,0:23:11.64:79,12,0	1/1:13,1:14:5.94:40,6,0	1/1:26,0:25:20.15:134,20,0	0/0:17,0:17:18.82:0,19,150	1/1:24,0:23:16.67:110,17,0	1/1:8,5:13:2.97:20,3,0	1/1:43,0:39:8.85:55,9,0	1/1:13,0:13:2.82:24,3,0	0/0:11,0:9:8.90:0,9,66	0/1:25,0:24:18.54:19,0,172	1/1:22,1:22:8.92:63,9,0	1/1:20,0:18:19.59:125,20,0	1/1:23,0:22:14.65:94,15,0	1/1:6,0:5:5.95:42,6,0
chr10	68462047	.	G	GAGA	22768.08	PASS	AB=1.000;AC=44;AF=0.786;AN=56;BaseQRankSum=-11.197;DP=531;FS=22.099;HRun=0;HaplotypeScore=64.8106;InbreedingCoeff=0.8735;MQ=66.68;MQ0=0;MQRankSum=-3.619;QD=56.92;ReadPosRankSum=-0.352;VQSLOD=3.8495;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,150,2520	1/1:1,6:7:18.06:412,18,0	0/1:9,0:9:0.03:0,0,102	0/1:4,0:4:3.94:4,0,74	0/0:20,0:20:60.20:0,60,1005	1/1:0,14:14:39.13:899,39,0	1/1:2,17:21:45.15:1036,45,0	1/1:6,25:31:81.28:1816,81,0	1/1:4,16:20:45.15:1024,45,0	1/1:3,18:21:63.19:1365,63,0	1/1:2,13:15:39.09:847,39,0	1/1:0,8:8:24.08:553,24,0	0/0:17,0:17:51.16:0,51,844	1/1:2,15:17:45.15:1036,45,0	1/1:1,23:24:66.23:1522,66,0	1/1:1,16:20:45.15:1026,45,0	1/1:3,22:26:66.23:1517,66,0	1/1:1,21:24:57.20:1314,57,0	1/1:3,15:19:54.17:1179,54,0	1/1:0,14:14:42.14:968,42,0	1/1:3,23:27:66.70:1521,67,0	1/1:1,16:17:48.16:1103,48,0	0/0:17,0:17:51.17:0,51,869	0/0:27,0:27:81.28:0,81,1360	1/1:1,17:18:45.15:1033,45,0	1/1:2,20:22:66.23:1510,66,0	1/1:2,13:15:30.10:667,30,0	1/1:0,7:7:18.06:415,18,0
chr10	68464363	.	C	CA	1248.14	PASS	AB=0.834;AC=32;AF=0.593;AN=54;BaseQRankSum=0.409;DP=373;FS=1.451;HRun=16;HaplotypeScore=48.9780;InbreedingCoeff=0.0652;MQ=40.72;MQ0=50;MQRankSum=-0.845;QD=4.22;ReadPosRankSum=-1.506;VQSLOD=0.2206;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,1:25:23.69:0,24,220	0/1:3,0:3:8.24:8,0,11	1/1:11,0:2:1.55:4,2,0	./.	0/1:13,1:16:6.26:6,0,50	1/1:7,7:14:19.95:131,20,0	0/1:6,3:6:21.92:22,0,22	1/1:17,10:20:6.75:225,7,0	0/1:7,2:5:7.90:30,0,8	0/1:13,1:15:16.73:17,0,67	0/0:6,0:9:6.71:0,7,57	1/1:6,5:9:5.99:48,6,0	0/0:2,0:2:2.91:0,3,17	1/1:7,0:6:2.94:18,3,0	0/1:11,4:12:0.84:19,0,1	0/1:4,3:6:7.78:39,0,8	1/1:15,13:24:7.64:268,8,0	0/0:12,0:16:20.34:0,20,58	0/1:13,6:15:33.51:94,0,34	1/1:7,3:9:8.94:67,9,0	0/1:5,1:4:8.35:18,0,8	0/1:4,0:3:0:0,0,0	0/0:5,0:5:2.91:0,3,17	0/1:3,0:2:0:0,0,0	0/1:9,5:13:9.88:10,0,43	1/1:12,11:19:18.31:210,18,0	1/1:8,9:17:1.13:102,1,0	1/1:11,4:14:0.62:60,1,0
chr10	68464938	.	TA	T	414.15	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=1.412;DP=567;FS=7.087;HRun=5;HaplotypeScore=88.7786;InbreedingCoeff=0.9910;MQ=77.19;MQ0=1;MQRankSum=-1.528;QD=24.36;ReadPosRankSum=0.243;VQSLOD=2.4441;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:41:99:0,117,1543	0/0:7,0:7:21.07:0,21,287	0/0:27,0:25:65.65:0,66,796	0/0:23,0:20:36.83:0,37,450	0/0:13,0:13:33.09:0,33,434	0/0:21,0:21:57.18:0,57,761	0/0:22,0:22:60.20:0,60,819	0/0:25,0:25:69.18:0,69,907	0/0:17,0:17:51.17:0,51,695	0/0:39,0:39:99:0,117,1598	0/0:21,0:21:63.18:0,63,824	0/0:19,0:19:57.19:0,57,771	0/0:23,0:23:60.13:0,60,791	0/0:26,0:26:72.14:0,72,913	0/0:13,0:12:33.05:0,33,423	0/0:17,0:17:48.13:0,48,636	0/0:26,0:26:66.15:0,66,878	1/1:0,17:17:45.13:509,45,0	0/0:11,0:11:33.10:0,33,437	0/0:22,0:22:60.20:0,60,812	0/0:23,0:21:51.08:0,51,653	0/0:15,0:15:36.06:0,36,454	0/0:11,0:11:27.06:0,27,348	0/0:12,0:12:27.09:0,27,369	0/0:17,0:17:27.09:0,27,369	0/0:31,0:31:84.28:0,84,1147	0/0:17,0:17:51:0,51,630	0/0:10,0:10:27.09:0,27,369
chr10	68464987	.	T	TAC	3651.74	PASS	AB=0.934;AC=39;AF=0.696;AN=56;BaseQRankSum=2.371;DP=659;FS=14.161;HRun=0;HaplotypeScore=185.0774;InbreedingCoeff=0.1513;MQ=52.92;MQ0=11;MQRankSum=-2.890;QD=6.13;ReadPosRankSum=-1.725;VQSLOD=2.0623;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:48,0:47:17.54:18,0,251	1/1:6,2:8:5.98:56,6,0	0/1:18,0:11:25.88:26,0,53	0/0:31,0:20:8.79:0,9,166	0/0:19,0:18:25.42:0,25,231	1/1:20,1:21:14.48:160,14,0	1/1:24,1:22:14.50:197,15,0	1/1:51,3:50:31.17:509,31,0	0/1:15,2:17:13.20:104,0,13	0/1:33,0:33:0.33:0,0,19	0/1:16,0:16:0.06:0,0,0	1/1:14,1:15:1.27:131,1,0	0/1:19,0:18:8.25:8,0,158	0/1:19,2:21:23.66:64,0,24	1/1:14,1:14:5.16:52,5,0	1/1:12,4:16:6.87:198,7,0	1/1:17,0:16:13.35:278,13,0	1/1:19,1:19:12.50:355,13,0	1/1:18,0:18:14.45:170,14,0	0/1:23,2:25:10.12:307,0,10	1/1:57,4:52:11.75:164,12,0	1/1:14,4:18:19.88:279,20,0	0/0:13,0:13:20.55:0,21,211	0/1:30,0:28:5.30:5,0,200	0/1:13,18:31:28.39:84,0,28	1/1:32,1:32:18.40:304,18,0	0/1:9,1:9:3.26:38,0,3	1/1:7,0:6:9.42:143,9,0
chr10	68464999	.	CAT	C	3190.46	PASS	AB=0.984;AC=41;AF=0.732;AN=56;BaseQRankSum=0.999;DP=609;FS=10.266;HRun=0;HaplotypeScore=170.7602;InbreedingCoeff=-0.0700;MQ=40.52;MQ0=16;MQRankSum=-2.692;QD=5.66;ReadPosRankSum=-1.598;VQSLOD=2.4429;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:44,0:43:77.47:77,0,217	1/1:8,0:8:2.50:20,2,0	1/1:15,0:8:18.75:119,19,0	0/1:21,0:9:32.96:33,0,54	0/1:25,0:24:5.04:5,0,260	1/1:19,1:20:9.38:65,9,0	1/1:19,1:17:9.69:100,10,0	1/1:44,1:41:40.04:507,40,0	1/1:14,2:15:17.11:128,17,0	1/1:32,0:31:70.52:573,71,0	1/1:13,0:12:20.50:168,21,0	1/1:13,1:14:17.71:115,18,0	0/1:19,0:18:52.64:53,0,110	0/1:20,0:20:21.25:28,0,21	1/1:13,1:13:7.81:52,8,0	0/1:12,2:14:2.59:78,0,3	1/1:15,1:15:25.97:176,26,0	0/1:19,0:18:27.38:180,0,27	1/1:14,0:14:9.65:129,10,0	0/1:28,0:28:35.95:97,0,36	1/1:55,0:45:13.81:104,14,0	0/1:16,1:17:24.07:93,0,24	0/0:14,0:14:0.80:0,1,209	0/1:32,0:30:48.07:48,0,73	0/0:31,0:31:6.94:0,7,62	0/1:30,0:29:4.73:229,0,5	1/1:6,0:5:11.91:88,12,0	1/1:7,0:6:14.87:84,15,0
chr10	68465000	.	ATACACACACACACACACACACACACG	A	2713.01	PASS	AB=0.995;AC=22;AF=0.393;AN=56;BaseQRankSum=-3.419;DP=600;FS=15.993;HRun=0;HaplotypeScore=323.6582;InbreedingCoeff=-0.4297;MQ=38.62;MQ0=17;MQRankSum=-1.634;QD=6.87;ReadPosRankSum=-4.835;VQSLOD=0.3868;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:42:50.56:0,51,1955	0/1:8,0:8:14.80:15,0,164	0/1:14,0:7:65.03:93,0,65	0/1:22,0:8:28.62:29,0,130	0/0:24,1:24:36.22:0,36,1528	0/0:20,0:20:12.04:0,12,488	0/1:20,0:17:52.47:52,0,430	0/1:43,0:40:99:316,0,943	0/1:16,0:15:99:214,0,425	0/1:31,0:30:99:385,0,240	0/1:13,0:12:50.68:85,0,51	0/1:12,0:12:99:143,0,210	0/0:20,0:19:20.31:0,20,1170	0/0:18,0:18:10:0,10,246	1/1:13,0:12:3.01:170,3,0	0/1:14,0:14:99:226,0,314	0/1:16,0:15:99:102,0,491	0/1:19,0:18:94.79:95,0,656	0/1:12,0:12:99:246,0,168	0/1:27,1:28:99:147,0,1107	0/1:56,0:46:54.31:54,0,150	0/1:16,1:17:99:142,0,495	0/0:14,0:14:0.59:0,1,1155	0/0:35,0:33:8.80:0,9,902	0/0:30,0:30:8.45:0,8,727	0/1:28,0:27:99:120,0,1233	1/1:5,1:5:11.93:200,12,0	0/1:7,0:6:40.25:40,0,309
chr10	68465069	.	CTT	C	4294.60	PASS	AB=0.846;AC=26;AF=0.464;AN=56;BaseQRankSum=3.477;DP=886;FS=38.862;HRun=2;HaplotypeScore=356.4940;InbreedingCoeff=-0.7150;MQ=50.57;MQ0=6;MQRankSum=-6.779;QD=5.48;ReadPosRankSum=-2.661;VQSLOD=-0.2559;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:31,1:31:31.22:31,0,415	0/1:15,1:16:34.41:34,0,280	0/1:32,4:26:99:179,0,348	0/1:44,3:29:99:156,0,334	0/1:18,9:27:33.64:34,0,249	0/1:26,9:34:99:285,0,220	0/0:27,1:27:17.41:0,17,411	0/1:40,3:41:76.70:77,0,649	0/1:32,8:40:99:265,0,600	1/1:17,9:26:27.49:624,27,0	0/0:8,7:15:4.07:0,4,11	0/1:35,12:47:99:497,0,365	0/1:23,4:27:99:210,0,386	0/1:37,4:41:19.01:19,0,612	0/1:24,11:34:99:259,0,355	0/1:29,9:38:99:203,0,453	0/1:29,4:31:90.97:91,0,495	0/1:13,4:17:99:136,0,157	0/1:22,3:25:88.31:88,0,442	0/1:19,11:30:99:158,0,234	0/0:56,4:53:14.85:0,15,500	0/1:31,10:41:99:209,0,396	0/1:14,4:18:77.85:78,0,148	0/1:31,5:36:1.52:2,0,411	0/1:24,5:29:99:129,0,301	0/1:30,6:36:99:300,0,554	0/1:16,7:23:99:187,0,174	0/1:3,1:4:27.15:44,0,27
chr10	68465076	.	TACACACACACACAC	T	2315.23	PASS	AB=0.975;AC=32;AF=0.615;AN=52;BaseQRankSum=5.969;DP=941;FS=23.932;HRun=0;HaplotypeScore=480.2229;InbreedingCoeff=0.3632;MQ=44.18;MQ0=11;MQRankSum=-6.537;QD=3.88;ReadPosRankSum=-2.276;VQSLOD=0.0967;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:41:44.06:0,44,2261	0/1:19,0:19:30.81:52,0,31	./.	./.	0/0:32,0:32:14.31:0,14,682	1/1:43,0:42:4.70:28,5,0	1/1:29,4:30:2.74:116,3,0	0/0:45,0:43:11.95:0,12,182	1/1:35,4:39:12.02:466,12,0	1/1:35,0:35:2.60:98,3,0	1/1:12,0:12:0.65:2,1,0	1/1:40,7:47:11.62:466,12,0	0/0:31,0:31:39.58:0,40,1765	0/0:42,0:43:0.39:0,0,1	1/1:35,1:35:6.38:142,6,0	1/1:36,2:38:6.02:233,6,0	0/1:35,1:34:99:141,0,122	0/0:20,0:19:9.46:0,9,230	1/1:26,0:25:1.46:18,1,0	1/1:27,2:29:4.42:119,4,0	1/1:61,0:55:2.85:6,3,0	1/1:42,1:43:2.91:117,3,0	0/0:24,0:23:6.50:0,6,487	0/0:40,0:39:41.53:0,42,2067	1/1:32,2:34:10.55:255,11,0	0/1:35,0:36:16.23:111,0,16	0/1:22,0:22:12.57:13,0,165	1/1:4,0:5:3.01:98,3,0
chr10	68467212	.	AT	A	958.97	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.536;DP=467;FS=2.098;HRun=7;HaplotypeScore=44.0060;InbreedingCoeff=0.8155;MQ=73.00;MQ0=0;MQRankSum=1.154;QD=23.39;ReadPosRankSum=-0.079;VQSLOD=3.0856;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:51.16:0,51,639	0/0:3,0:3:6.02:0,6,75	0/0:10,0:10:23.70:0,24,243	0/0:5,0:6:5.21:0,5,95	0/0:30,0:30:84.16:0,84,1011	0/0:22,0:22:66.19:0,66,806	0/0:11,0:11:33.11:0,33,415	0/0:33,0:33:99:0,99,1212	0/0:21,0:21:63.20:0,63,792	1/1:1,18:19:54.10:542,54,0	1/1:4,18:22:54.07:538,54,0	0/0:12,0:12:27.07:0,27,326	0/0:19,1:20:26.55:0,27,621	0/0:13,0:14:35.59:0,36,411	0/0:24,0:24:72.22:0,72,894	0/0:12,0:12:36.09:0,36,427	0/0:11,0:11:27.05:0,27,311	0/0:15,0:15:36.06:0,36,421	0/0:16,0:16:39.12:0,39,480	0/0:27,0:27:63.18:0,63,778	0/0:5,0:5:15.05:0,15,189	0/0:9,0:9:24.06:0,24,289	0/0:14,0:14:42.12:0,42,515	0/0:15,0:15:36.05:0,36,432	0/0:14,0:14:42.13:0,42,528	0/0:30,1:31:53.65:0,54,977	0/0:31,1:32:59.68:0,60,1051	0/0:1,0:1:3.01:0,3,38
chr10	68468623	.	CT	C	7055.56	PASS	AB=0.952;AC=38;AF=0.679;AN=56;BaseQRankSum=3.763;DP=697;FS=5.697;HRun=11;HaplotypeScore=86.5056;InbreedingCoeff=0.8288;MQ=74.43;MQ0=2;MQRankSum=-1.214;QD=14.61;ReadPosRankSum=4.618;VQSLOD=5.3663;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:55:99:0,132,1361	1/1:2,5:7:14.98:123,15,0	0/1:34,1:30:0.23:0,0,171	0/1:25,2:20:34.10:34,0,134	0/0:24,1:25:31.71:0,32,520	1/1:5,18:25:45.99:357,46,0	1/1:7,26:33:33.90:485,34,0	1/1:6,16:22:44.91:366,45,0	1/1:5,22:27:32.73:419,33,0	0/0:10,0:25:45.08:0,45,289	0/0:2,1:24:33.05:0,33,273	1/1:1,21:23:58.97:474,59,0	0/0:20,0:21:32.72:0,33,526	1/1:2,15:18:9:269,9,0	1/1:2,25:29:35.97:490,36,0	1/1:1,24:27:67:529,67,0	1/1:3,31:36:93.96:750,94,0	0/0:18,1:19:23.44:0,23,443	1/1:7,13:20:3.91:238,4,0	1/1:4,20:24:50.88:418,51,0	1/1:5,25:30:62.91:517,63,0	1/1:3,14:17:35.93:294,36,0	0/0:13,0:14:35.92:0,36,365	0/0:29,0:31:66:0,66,686	1/1:3,16:21:43:332,43,0	1/1:8,16:26:34.66:405,35,0	1/1:5,23:30:63.89:504,64,0	1/1:2,3:5:5.98:49,6,0
chr10	68469016	.	GTGTGTGTGTGTGTGTGTGTGTGTATCCATCTGTCCGTC	G	15750.52	PASS	AC=30;AF=0.577;AN=52;BaseQRankSum=8.264;DP=466;FS=15.706;HRun=0;HaplotypeScore=370.5295;InbreedingCoeff=0.8845;MQ=44.57;MQ0=17;MQRankSum=-9.181;QD=66.74;ReadPosRankSum=4.301;VQSLOD=2.1578;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:22:45.15:0,45,3038	1/1:10,0:11:18.06:969,18,0	0/0:19,0:9:14.76:0,15,269	0/0:19,0:8:10.81:0,11,279	0/0:21,0:21:35.51:0,36,1944	1/1:16,0:15:11.30:1078,11,0	1/1:15,0:15:6.56:413,7,0	./.	1/1:14,1:13:21.07:1215,21,0	0/0:19,0:19:51.17:0,51,3148	0/0:16,0:16:36.07:0,36,2365	1/1:19,0:20:27.09:1518,27,0	0/0:16,0:16:45.14:0,45,3077	1/1:16,1:17:15.05:964,15,0	1/1:17,1:19:36.30:1945,36,0	1/1:18,0:19:30.10:1837,30,0	1/1:9,15:24:3.01:137,3,0	0/0:16,0:15:38.49:0,38,1720	1/1:14,0:11:26.43:728,26,0	1/1:13,0:12:11.53:525,12,0	0/0:31,0:29:0.26:0,0,3	1/1:12,0:11:18.05:738,18,0	0/0:14,0:14:36.08:0,36,2841	0/0:34,0:34:93.32:0,93,8019	1/1:9,1:10:15.05:888,15,0	1/1:19,0:20:5.79:1895,6,0	1/1:10,1:11:18.04:901,18,0	./.
chr10	68469018	.	GTGTGTGTGTGTGTGTGTGTGTA	G	13599.44	PASS	AB=0.941;AC=31;AF=0.596;AN=52;BaseQRankSum=8.983;DP=468;FS=14.561;HRun=0;HaplotypeScore=254.7258;InbreedingCoeff=0.9112;MQ=44.58;MQ0=17;MQRankSum=-8.093;QD=49.81;ReadPosRankSum=3.662;VQSLOD=2.1873;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:21:48.03:0,48,2018	1/1:4,5:9:18.06:828,18,0	0/0:19,0:9:26.91:0,27,348	0/0:19,0:7:10.79:0,11,226	0/0:20,0:20:32.29:0,32,1805	1/1:15,5:19:24.85:1000,25,0	1/1:13,1:14:14.95:413,15,0	./.	1/1:11,4:13:21.07:1093,21,0	0/0:18,0:18:51.16:0,51,2673	0/0:16,0:16:33.05:0,33,1726	1/1:14,6:20:27.09:1329,27,0	0/0:15,0:15:45.14:0,45,2760	1/1:10,4:14:15.05:811,15,0	1/1:18,6:24:36.45:1684,36,0	1/1:12,7:19:30.10:1616,30,0	1/1:17,0:17:3.01:38,3,0	0/0:16,0:15:38.49:0,38,1326	1/1:12,2:11:22.46:461,22,0	1/1:11,2:12:10.69:503,11,0	0/1:30,2:30:0.01:0,0,0	1/1:11,5:15:18.05:683,18,0	0/0:15,0:15:39.12:0,39,2529	0/0:33,0:33:93.27:0,93,6428	1/1:10,4:14:14.87:745,15,0	1/1:8,13:21:8.45:1628,8,0	1/1:7,4:11:17.97:767,18,0	./.
chr10	68469038	.	GTATCCATC	G	740.17	PASS	AB=0.954;AC=16;AF=0.296;AN=54;BaseQRankSum=3.460;DP=446;FS=0.000;HRun=0;HaplotypeScore=207.7045;InbreedingCoeff=0.0441;MQ=44.14;MQ0=12;MQRankSum=-1.797;QD=3.40;ReadPosRankSum=0.842;VQSLOD=1.9523;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:22:7.88:0,8,1841	0/0:8,0:8:1.56:0,2,7	0/0:27,0:13:36.87:0,37,971	0/0:23,0:12:32.69:0,33,1022	0/0:11,0:11:15.58:0,16,473	0/0:16,0:16:12.74:0,13,101	0/0:15,0:15:4.06:0,4,24	1/1:1,10:10:30.06:463,30,0	0/1:14,0:12:18.66:19,0,70	0/1:15,0:15:17.18:17,0,967	0/1:15,0:15:12.51:13,0,800	0/1:17,0:17:0.23:0,0,16	0/0:13,0:13:36.08:0,36,1081	0/1:14,0:14:3.45:20,0,3	0/1:22,0:22:5.79:6,0,66	0/0:14,0:14:8.82:0,9,31	1/1:16,0:16:2.66:61,3,0	0/0:13,0:12:24.97:0,25,337	0/1:4,0:11:50.41:50,0,76	0/0:7,0:6:3.99:0,4,15	0/1:33,2:33:6.27:16,0,6	0/0:15,0:14:6.53:0,7,22	0/0:11,0:11:24:0,24,721	0/0:32,0:32:89.65:0,90,2899	1/1:16,0:16:0.16:14,0,0	0/1:18,0:18:83.11:179,0,83	0/1:12,0:12:31.38:31,0,63	./.
chr10	68469039	.	TATCCATCTGTCC	T	1337.46	PASS	AB=0.921;AC=27;AF=0.500;AN=54;BaseQRankSum=6.224;DP=446;FS=3.368;HRun=0;HaplotypeScore=229.9554;InbreedingCoeff=-0.0154;MQ=44.16;MQ0=12;MQRankSum=-5.894;QD=4.22;ReadPosRankSum=4.754;VQSLOD=2.4872;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:21,0:20:9.72:10,0,2473	1/1:8,0:8:5.43:66,5,0	0/0:28,0:13:27.28:0,27,722	0/0:24,0:13:35.55:0,36,1011	0/1:9,0:9:15.32:15,0,563	0/1:13,3:16:14.80:15,0,46	1/1:12,2:14:4.17:23,4,0	0/1:11,0:10:22.86:99,0,23	0/1:11,3:12:43.34:43,0,88	0/1:15,0:15:43.59:44,0,1005	0/1:15,0:15:37.37:37,0,935	1/1:15,2:17:5.87:60,6,0	0/0:13,0:13:36.09:0,36,1442	1/1:13,1:14:1.41:61,1,0	0/1:17,5:22:47:62,0,47	0/1:11,3:14:1.16:72,0,1	1/1:17,0:17:2.57:98,3,0	0/0:13,0:12:24.43:0,24,452	0/1:14,0:12:1.60:205,0,2	0/0:5,2:6:3.85:0,4,14	0/1:30,4:33:5.72:53,0,6	0/1:11,4:14:4.82:5,0,11	0/0:12,0:12:21.59:0,22,855	0/0:32,0:32:89.65:0,90,3820	1/1:12,4:16:4.13:68,4,0	1/1:15,3:18:7.61:382,8,0	0/1:12,0:12:28.67:82,0,29	./.
chr10	68469079	.	CGTCCGTCT	C	5998.73	PASS	AB=0.734;AC=19;AF=0.339;AN=56;BaseQRankSum=11.347;DP=602;FS=12.159;HRun=0;HaplotypeScore=195.6428;InbreedingCoeff=-0.3519;MQ=48.88;MQ0=15;MQRankSum=-12.251;QD=17.14;ReadPosRankSum=-0.155;VQSLOD=3.0411;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:38:99:0,117,4280	0/1:3,7:10:43.81:302,0,44	0/0:35,0:15:24.78:0,25,640	0/0:33,0:17:28.94:0,29,848	0/0:8,0:8:24.07:0,24,732	0/1:6,16:22:99:459,0,171	0/1:11,16:27:99:358,0,201	0/0:31,0:30:64.60:0,65,1726	0/1:22,0:22:54.23:131,0,54	0/0:15,0:15:45.12:0,45,883	0/0:16,0:16:36.02:0,36,719	0/1:4,16:20:71.93:503,0,72	0/0:24,0:24:72.25:0,72,2734	0/1:3,21:24:35.62:755,0,36	0/1:7,17:24:99:677,0,110	0/1:9,10:19:99:348,0,132	0/1:16,3:19:99:147,0,139	0/1:14,1:15:99:130,0,511	0/1:15,2:16:99:237,0,446	0/1:12,0:12:41.59:42,0,152	0/1:27,2:29:79.50:79,0,314	0/1:8,18:26:99:273,0,147	0/0:18,0:18:48.13:0,48,1475	0/0:32,0:32:90.27:0,90,3047	0/1:6,14:20:68.62:441,0,69	0/1:12,2:14:99:465,0,117	1/1:4,24:28:5.36:570,5,0	0/1:1,1:2:4.79:81,0,5
chr10	68469083	.	CGTCT	C	3621.45	PASS	AB=0.975;AC=18;AF=0.321;AN=56;BaseQRankSum=12.221;DP=627;FS=13.008;HRun=0;HaplotypeScore=172.1318;InbreedingCoeff=-0.4664;MQ=49.09;MQ0=15;MQRankSum=-10.965;QD=10.03;ReadPosRankSum=-0.890;VQSLOD=2.4271;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:40:99:0,120,2849	0/1:10,0:10:62.41:104,0,62	0/0:36,0:15:31.03:0,31,510	0/0:35,0:18:28.94:0,29,647	0/0:11,0:11:33.04:0,33,580	0/1:21,0:21:99:222,0,152	0/1:27,0:27:99:182,0,203	0/0:33,0:32:85.62:0,86,1336	0/1:4,19:23:52.32:729,0,52	0/0:20,0:20:34.76:0,35,285	0/0:20,0:20:5.55:0,6,156	0/1:20,0:20:53.38:175,0,53	0/0:24,0:24:72.22:0,72,1827	0/1:24,0:24:54.29:321,0,54	0/1:24,0:24:99:287,0,100	0/1:15,0:15:99:132,0,150	0/1:20,0:20:99:127,0,125	0/1:16,0:16:80.44:80,0,335	0/1:20,0:19:99:110,0,339	0/1:11,0:11:17.97:18,0,156	0/1:38,0:38:99:139,0,287	0/1:25,0:25:99:151,0,147	0/0:16,0:16:42.14:0,42,1050	0/0:30,0:30:84.29:0,84,1956	0/1:19,0:19:70.60:152,0,71	0/1:19,0:19:96.68:358,0,97	0/1:27,0:27:31.67:309,0,32	0/1:2,0:2:8.54:26,0,9
chr10	68469087	.	TATCC	T	1521.16	PASS	AB=1.000;AC=20;AF=0.357;AN=56;BaseQRankSum=9.652;DP=640;FS=27.653;HRun=0;HaplotypeScore=177.1856;InbreedingCoeff=0.2661;MQ=49.28;MQ0=17;MQRankSum=-5.655;QD=5.30;ReadPosRankSum=3.591;VQSLOD=1.2934;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:42:96.33:0,96,2225	0/0:8,0:9:7:0,7,78	0/0:36,0:15:11.87:0,12,183	0/0:37,0:21:25.37:0,25,512	0/0:12,0:12:27.09:0,27,632	0/1:20,0:21:10.16:10,0,93	0/1:27,0:27:27.03:27,0,52	0/0:34,0:33:24.07:0,24,420	1/1:23,0:23:35.93:306,36,0	1/1:4,15:19:45.15:708,45,0	1/1:3,18:21:27.09:430,27,0	1/1:19,0:19:5:23,5,0	0/0:24,0:24:63.20:0,63,1456	0/1:24,0:25:18.73:19,0,131	0/1:23,0:23:18:28,0,18	0/1:14,0:15:11.76:12,0,60	0/0:20,0:20:7.35:0,7,146	0/0:15,0:15:22.35:0,22,277	0/0:23,0:21:1.45:0,1,84	0/0:3,0:15:7.99:0,8,81	0/0:38,0:38:23.91:0,24,242	0/1:25,0:26:30.65:31,0,86	0/0:16,0:16:39.13:0,39,913	0/0:31,0:31:54.14:0,54,1227	1/1:19,0:19:9.75:32,10,0	0/1:19,0:19:32.96:33,0,197	0/1:28,0:28:32.99:33,0,92	1/1:2,0:2:2.68:11,3,0
chr10	68470458	.	G	GA	401.03	PASS	AB=0.817;AC=4;AF=0.071;AN=56;BaseQRankSum=-6.528;DP=543;FS=6.294;HRun=13;HaplotypeScore=60.4497;InbreedingCoeff=0.2448;MQ=65.74;MQ0=7;MQRankSum=2.012;QD=5.65;ReadPosRankSum=-1.349;VQSLOD=1.6420;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:30:71.08:0,71,455	0/0:8,0:8:8.86:0,9,61	0/0:48,0:11:22.08:0,22,125	0/0:28,0:9:5.19:0,5,23	0/0:19,2:21:19.45:0,19,267	0/0:14,1:15:7.78:0,8,196	0/0:12,1:13:10.82:0,11,216	0/1:18,12:31:33.61:268,0,34	0/0:14,1:15:10.97:0,11,218	0/0:14,1:23:6.91:0,7,136	0/0:13,0:13:32.68:0,33,226	0/0:14,0:14:7.16:0,7,181	0/0:13,0:15:27.71:0,28,170	0/0:25,1:26:33.77:0,34,365	0/0:10,0:11:25.83:0,26,170	0/0:19,0:19:44.56:0,45,308	0/0:13,1:14:1.86:0,2,156	1/1:1,12:14:23.86:209,24,0	0/0:24,2:28:22.20:0,22,273	0/1:23,2:25:36.89:37,0,207	0/0:5,0:5:11.79:0,12,76	0/0:9,0:10:25.79:0,26,170	0/0:14,0:16:39.75:0,40,258	0/0:9,0:9:0.37:0,0,136	0/0:18,0:20:11.89:0,12,209	0/0:30,1:32:33.83:0,34,426	0/0:24,1:27:9.76:0,10,325	0/0:12,0:12:17.82:0,18,123
chr10	68472738	.	CG	C	16592.10	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=9.931;DP=699;FS=0.923;HRun=1;HaplotypeScore=102.6955;InbreedingCoeff=0.9974;MQ=65.59;MQ0=1;MQRankSum=-0.155;QD=37.80;ReadPosRankSum=2.466;VQSLOD=5.0311;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,132,2102	1/1:0,21:21:54.18:755,54,0	0/0:25,0:24:69.10:0,69,1044	0/0:24,0:22:53.52:0,54,775	0/0:25,0:25:75.24:0,75,1165	1/1:0,25:25:66.22:923,66,0	1/1:1,17:18:14.80:479,15,0	1/1:1,22:22:63.16:842,63,0	1/1:0,23:23:60.20:839,60,0	0/0:23,0:23:69.19:0,69,1050	0/0:23,0:23:69.24:0,69,1100	1/1:0,27:27:69.23:965,69,0	0/0:29,0:29:87.27:0,87,1349	1/1:0,22:22:60.20:839,60,0	1/1:3,27:30:90.30:1257,90,0	1/1:0,30:30:81.27:1133,81,0	1/1:1,25:26:63.21:881,63,0	0/0:33,0:33:99:0,99,1557	1/1:0,18:17:51.16:698,51,0	1/1:0,29:29:84.28:1168,84,0	1/1:0,25:25:75.25:1049,75,0	1/1:0,22:22:57.19:797,57,0	0/0:17,0:17:48.16:0,48,760	0/0:16,0:16:48.15:0,48,743	1/1:0,22:22:60.20:839,60,0	1/1:0,27:27:81.25:1114,81,0	1/1:0,41:41:99:1594,114,0	1/1:0,10:10:30.10:419,30,0
chr10	68472830	.	GAT	G	13743.69	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=10.448;DP=633;FS=3.825;HRun=0;HaplotypeScore=81.2330;InbreedingCoeff=0.9994;MQ=83.81;MQ0=4;MQRankSum=-4.637;QD=33.04;ReadPosRankSum=2.219;VQSLOD=6.8641;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:96.29:0,96,1600	1/1:3,7:10:24:319,24,0	0/0:30,0:30:55.97:0,56,1082	0/0:15,0:14:36.01:0,36,523	0/0:33,0:33:90.28:0,90,1499	1/1:2,15:17:45.15:599,45,0	1/1:4,16:20:36.12:479,36,0	1/1:3,28:30:78.14:996,78,0	1/1:4,14:17:42.14:558,42,0	0/0:24,0:24:66.23:0,66,1138	0/0:21,0:21:51.17:0,51,883	1/1:7,21:28:71.81:913,72,0	0/0:14,0:14:33.08:0,33,513	1/1:4,18:21:57.17:731,57,0	1/1:3,31:34:84.28:1114,84,0	1/1:10,15:25:63.20:824,63,0	1/1:4,13:17:42.14:558,42,0	1/1:3,17:20:45.15:599,45,0	1/1:1,13:14:36.10:461,36,0	1/1:7,31:38:99:1436,108,0	1/1:3,16:19:54.17:705,54,0	1/1:0,21:20:54.13:699,54,0	0/0:27,0:27:63.22:0,63,1083	0/0:16,0:16:45.15:0,45,764	1/1:1,17:18:51.17:679,51,0	1/1:9,23:32:35.29:1050,35,0	1/1:7,16:21:51.15:663,51,0	1/1:0,9:9:27.09:359,27,0
chr10	68473680	.	G	GGAGGCA	16839.77	PASS	AB=0.667;AC=41;AF=0.732;AN=56;BaseQRankSum=-9.107;DP=557;FS=5.271;HRun=0;HaplotypeScore=104.1000;InbreedingCoeff=0.8622;MQ=56.01;MQ0=0;MQRankSum=-11.744;QD=41.38;ReadPosRankSum=-1.370;VQSLOD=4.2999;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:66.17:0,66,1233	1/1:2,10:12:20.67:705,21,0	0/0:25,0:19:18.77:0,19,404	0/0:23,0:20:30.06:0,30,600	0/0:24,0:24:42.11:0,42,794	1/1:4,15:20:36.12:1149,36,0	1/1:3,6:9:12.04:341,12,0	1/1:8,14:21:38.96:788,39,0	1/1:4,14:18:39.13:1311,39,0	1/1:8,10:19:26.95:535,27,0	1/1:7,6:14:2.62:17,3,0	1/1:2,18:24:42.14:1407,42,0	0/0:8,0:8:24.08:0,24,521	1/1:4,11:17:33.11:1019,33,0	1/1:2,15:18:24.08:745,24,0	1/1:4,12:16:27.09:908,27,0	1/1:13,16:30:36.12:1135,36,0	0/1:6,5:12:20.20:391,0,20	1/1:12,10:23:42:908,42,0	1/1:12,19:33:39.13:1266,39,0	1/1:7,12:22:18:467,18,0	1/1:8,9:22:12.93:404,13,0	0/0:14,0:14:27.09:0,27,586	0/0:23,0:23:57.18:0,57,1196	1/1:3,7:11:18.06:543,18,0	1/1:11,13:25:35.91:969,36,0	1/1:4,19:24:42.14:1411,42,0	1/1:2,11:15:15.01:420,15,0
chr10	68474678	.	A	ATGG	1838.25	PASS	AB=0.708;AC=3;AF=0.068;AN=44;BaseQRankSum=-4.550;DP=486;FS=6.423;HRun=0;HaplotypeScore=64.8874;InbreedingCoeff=-0.1228;MQ=34.78;MQ0=94;MQRankSum=-6.601;QD=22.42;ReadPosRankSum=-3.874;VQSLOD=1.9846;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:52:99:0,108,1799	./.	./.	./.	0/0:23,0:21:51.17:0,51,850	0/0:8,0:6:9.03:0,9,150	./.	./.	0/0:5,0:3:3.01:0,3,50	0/1:14,13:22:99:855,0,334	0/1:17,14:26:99:764,0,151	0/0:9,0:8:12.04:0,12,200	0/0:29,0:26:57.19:0,57,950	./.	0/0:13,0:10:12.04:0,12,200	0/0:6,0:4:3.01:0,3,50	0/0:22,0:16:30.10:0,30,499	0/1:16,6:17:99:315,0,126	0/0:13,0:9:24.01:0,24,367	0/0:10,0:6:9.03:0,9,155	0/0:26,0:13:12.04:0,12,200	0/0:10,0:5:3.01:0,3,50	0/0:21,0:20:48.16:0,48,800	0/0:41,0:36:75.24:0,75,1223	0/0:10,0:8:3.01:0,3,50	0/0:13,0:11:27.09:0,27,450	0/0:10,0:9:12.04:0,12,200	0/0:11,0:9:18.06:0,18,300
chr10	68474749	.	TATA	T	393.39	PASS	AB=0.783;AC=9;AF=0.265;AN=34;BaseQRankSum=4.348;DP=223;FS=4.889;HRun=0;HaplotypeScore=31.9319;InbreedingCoeff=0.2889;MQ=31.20;MQ0=61;MQRankSum=-3.659;QD=6.90;ReadPosRankSum=0.542;VQSLOD=1.3173;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:16,3:17:36.12:0,36,862	./.	0/0:3,0:2:3.01:0,3,39	./.	0/0:12,0:12:27.09:0,27,605	./.	./.	./.	./.	0/0:15,0:15:42.14:0,42,952	0/0:24,0:18:24.08:0,24,498	0/0:2,0:1:3.01:0,3,74	0/0:10,1:9:24.08:0,24,544	./.	1/1:4,2:3:6.02:110,6,0	./.	0/0:5,1:3:3.01:0,3,68	0/0:12,0:10:18.06:0,18,405	1/1:4,4:4:9.03:167,9,0	1/1:2,0:1:3.01:55,3,0	0/1:13,3:5:9.52:10,0,68	./.	0/0:12,0:11:30.10:0,30,686	0/1:13,2:12:33.27:33,0,322	./.	0/1:4,6:6:61.85:137,0,62	./.	0/0:1,0:1:3.01:0,3,73
chr10	68476999	.	TTATAATA	T	22749.52	PASS	AB=0.525;AC=35;AF=0.625;AN=56;BaseQRankSum=10.675;DP=625;FS=4.688;HRun=0;HaplotypeScore=171.6326;InbreedingCoeff=0.9227;MQ=85.36;MQ0=0;MQRankSum=-18.482;QD=60.83;ReadPosRankSum=2.590;VQSLOD=4.5589;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,114,4419	1/1:0,9:9:27.06:667,27,0	0/0:27,0:27:78.27:0,78,2879	0/0:26,0:26:74.84:0,75,2661	0/0:24,0:24:69.24:0,69,2765	1/1:0,19:19:51.18:1374,51,0	1/1:2,14:16:39.05:929,39,0	1/1:1,27:28:81.26:2037,81,0	1/1:0,33:33:93.21:2308,93,0	0/0:30,0:30:90.31:0,90,3644	0/0:16,0:16:45.15:0,45,1817	1/1:4,35:39:83.78:1980,84,0	0/0:17,0:17:51.18:0,51,1989	1/1:1,21:22:54.14:1393,54,0	1/1:2,21:23:57.11:1413,57,0	1/1:1,21:22:60.09:1435,60,0	1/1:3,18:21:41.67:1131,42,0	0/0:24,0:24:72.25:0,72,2950	1/1:2,9:11:27.09:687,27,0	1/1:1,11:12:33.03:767,33,0	1/1:3,11:14:27.01:562,27,0	1/1:3,15:18:35.99:787,36,0	0/0:22,0:22:66.23:0,66,2669	0/0:26,0:26:78.27:0,78,2982	1/1:2,17:19:38.96:915,39,0	0/1:3,29:32:32.69:2103,0,33	1/1:1,23:24:63.22:1697,63,0	1/1:0,12:12:21.07:566,21,0
chr10	68477020	.	CTAG	C	2180.27	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-0.953;DP=664;FS=10.796;HRun=0;HaplotypeScore=197.6705;InbreedingCoeff=0.9970;MQ=85.54;MQ0=0;MQRankSum=-0.421;QD=42.75;ReadPosRankSum=-0.255;VQSLOD=3.8489;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:87.30:0,87,2000	0/0:12,0:12:30.10:0,30,690	0/0:31,0:31:84:0,84,1595	0/0:24,0:24:53.65:0,54,1076	0/0:31,0:31:90.30:0,90,1991	0/0:20,0:20:42.14:0,42,951	0/0:16,0:16:33.11:0,33,759	0/0:32,0:32:96.29:0,96,2092	0/0:38,0:38:90.31:0,90,1965	1/1:0,33:33:99:1688,99,0	1/1:1,17:18:36.12:614,36,0	0/0:37,0:37:87.30:0,87,1962	0/0:17,0:17:51.18:0,51,1163	0/0:26,0:26:57.20:0,57,1305	0/0:24,0:24:57.20:0,57,1310	0/0:25,0:25:63.22:0,63,1449	0/0:20,0:20:45.15:0,45,1035	0/0:29,0:29:81.28:0,81,1842	0/0:16,0:16:48.16:0,48,1061	0/0:16,0:16:45.15:0,45,1016	0/0:18,0:18:30.10:0,30,690	0/0:14,0:14:33.11:0,33,758	0/0:24,0:24:66.23:0,66,1521	0/0:21,0:21:60.21:0,60,1359	0/0:21,0:21:45.15:0,45,1034	0/0:31,1:32:36.11:0,36,1875	0/0:27,0:27:72.25:0,72,1627	0/0:12,0:12:21.07:0,21,483
chr10	68479759	.	AC	A	15772.37	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=12.653;DP=717;FS=3.185;HRun=1;HaplotypeScore=73.4368;InbreedingCoeff=0.9999;MQ=87.84;MQ0=0;MQRankSum=-3.585;QD=38.10;ReadPosRankSum=5.192;VQSLOD=5.3541;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,144,2237	1/1:0,19:19:54.18:755,54,0	0/0:26,0:26:75.22:0,75,1128	0/0:24,0:24:66.02:0,66,932	0/0:40,0:40:99:0,114,1812	1/1:0,15:15:36.12:503,36,0	1/1:0,26:26:60.20:838,60,0	0/0:37,0:37:99:0,111,1748	1/1:0,17:17:45.15:629,45,0	0/0:34,0:34:99:0,99,1553	0/0:26,0:26:78.24:0,78,1222	1/1:0,28:28:78.26:1091,78,0	0/0:17,0:17:51.17:0,51,815	1/1:0,29:29:84.28:1174,84,0	1/1:0,22:22:63.21:881,63,0	1/1:0,27:27:78.26:1089,78,0	1/1:0,29:29:84.28:1173,84,0	1/1:0,14:14:35.91:503,36,0	1/1:0,28:28:84.28:1163,84,0	1/1:0,20:20:54.14:733,54,0	1/1:0,24:24:63.21:879,63,0	1/1:0,29:29:75.25:1049,75,0	0/0:27,0:27:78.27:0,78,1236	0/0:24,0:24:72.23:0,72,1113	1/1:0,16:16:42.14:588,42,0	1/1:1,26:27:33.26:1004,33,0	1/1:0,24:24:69.23:964,69,0	1/1:0,20:20:54.18:755,54,0
chr10	68480523	.	C	CA	1064.97	PASS	AB=0.933;AC=5;AF=0.089;AN=56;BaseQRankSum=-4.025;DP=452;FS=4.553;HRun=2;HaplotypeScore=48.0058;InbreedingCoeff=0.8623;MQ=81.13;MQ0=0;MQRankSum=-1.058;QD=23.15;ReadPosRankSum=-3.152;VQSLOD=2.5835;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:15:45.14:0,45,558	0/0:8,0:8:21.04:0,21,245	0/0:15,0:15:39.11:0,39,466	0/0:19,0:20:40.12:0,40,584	0/0:19,0:19:54.14:0,54,643	0/0:18,0:18:48.15:0,48,595	0/0:12,0:12:33.10:0,33,409	0/0:27,0:27:81.25:0,81,994	0/0:8,0:8:24.05:0,24,283	1/1:0,17:17:48.14:671,48,0	1/1:1,14:15:39.04:515,39,0	0/0:14,0:14:42.12:0,42,507	0/0:16,0:16:42.10:0,42,504	0/0:13,0:13:30.09:0,30,372	0/0:11,0:11:30.09:0,30,372	0/0:12,0:12:36.11:0,36,446	0/0:23,0:22:69.22:0,69,854	0/0:16,0:16:45.12:0,45,543	0/0:17,0:17:48.12:0,48,569	0/0:16,0:16:42.13:0,42,521	0/0:23,0:23:66.17:0,66,791	0/0:11,0:11:30.09:0,30,371	0/0:11,0:11:33.10:0,33,409	0/0:24,0:24:66.19:0,66,805	0/0:14,0:14:42.13:0,42,521	0/1:13,1:14:1.09:1,0,441	0/0:29,0:29:84.25:0,84,1028	0/0:13,0:13:36.09:0,36,432
chr10	68480619	.	CAAAA	C	3599.74	PASS	AB=1.000;AC=35;AF=0.625;AN=56;BaseQRankSum=-1.348;DP=356;FS=5.335;HRun=17;HaplotypeScore=66.2361;InbreedingCoeff=0.7152;MQ=80.63;MQ0=3;MQRankSum=0.288;QD=17.14;ReadPosRankSum=7.861;VQSLOD=0.7941;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:18:40.01:0,40,696	1/1:0,4:4:9.03:114,9,0	0/0:27,0:11:14.93:0,15,174	0/1:18,0:13:2.60:3,0,94	0/0:12,0:13:23.73:0,24,356	1/1:4,11:18:14.20:333,14,0	1/1:2,3:5:8.99:114,9,0	0/0:18,0:28:36.10:0,36,244	1/1:2,6:8:0.82:103,1,0	0/0:6,0:11:20.65:0,21,152	0/0:7,0:12:8.32:0,8,63	1/1:0,7:8:21.05:248,21,0	0/0:8,0:8:3.01:0,3,61	1/1:3,3:6:8.96:114,9,0	1/1:2,3:5:5.97:76,6,0	1/1:1,4:6:9:100,9,0	1/1:2,10:12:8.92:114,9,0	0/0:4,0:13:1.21:0,1,27	1/1:5,8:14:23.67:265,24,0	1/1:9,12:22:26.60:348,27,0	1/1:6,7:14:11.86:137,12,0	1/1:2,1:3:2.96:38,3,0	0/0:5,0:8:13.29:0,13,210	0/0:7,0:7:0:0,0,0	1/1:3,12:16:15.38:398,15,0	1/1:2,6:8:14.88:173,15,0	1/1:7,8:15:11.85:133,12,0	1/1:2,21:26:66.03:789,66,0
chr10	68480795	.	A	AT	595.03	PASS	AB=0.883;AC=10;AF=0.179;AN=56;BaseQRankSum=2.302;DP=465;FS=1.953;HRun=12;HaplotypeScore=61.0007;InbreedingCoeff=0.2994;MQ=74.60;MQ0=7;MQRankSum=0.260;QD=4.08;ReadPosRankSum=-3.242;VQSLOD=0.1087;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,2:38:31.59:0,32,542	0/0:4,0:4:11.69:0,12,77	0/1:34,0:16:0.34:0,0,71	0/0:20,0:14:4.53:0,5,57	0/0:17,1:18:31.53:0,32,220	0/0:18,1:19:19.82:0,20,301	0/0:10,0:10:26.84:0,27,197	1/1:13,1:36:48.33:353,48,0	0/1:8,1:9:5.35:5,0,126	1/1:3,8:11:17.94:158,18,0	0/1:9,8:17:13.90:190,0,14	0/0:8,0:9:19.93:0,20,137	0/0:9,0:9:20.84:0,21,150	0/0:8,0:8:13.93:0,14,93	0/0:15,0:17:46.74:0,47,330	0/0:13,0:14:40.82:0,41,290	0/0:36,0:39:87.65:0,88,636	0/1:1,0:10:5.16:5,0,20	0/0:22,3:27:3.97:0,4,328	0/0:10,0:9:19.92:0,20,136	0/0:13,0:13:6.66:0,7,155	0/0:6,0:6:11.86:0,12,85	0/0:6,0:6:17.89:0,18,130	0/1:8,1:9:2.33:2,0,148	0/1:14,4:18:20.30:20,0,197	0/0:20,0:20:46.23:0,46,314	0/0:13,0:11:25.12:0,25,175	0/0:16,0:16:38.72:0,39,284
chr10	68485705	.	TAGAG	T	14073.34	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=13.788;DP=485;FS=11.954;HRun=0;HaplotypeScore=81.7744;InbreedingCoeff=0.9624;MQ=74.34;MQ0=2;MQRankSum=-5.547;QD=48.87;ReadPosRankSum=2.902;VQSLOD=4.9071;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,105,2804	1/1:0,7:7:18.01:318,18,0	0/0:12,0:12:33.11:0,33,715	0/0:8,0:8:24:0,24,341	0/0:38,0:38:99:0,114,3141	1/1:1,21:22:63.22:1252,63,0	1/1:0,10:10:11.70:239,12,0	0/0:37,0:37:99:0,111,2849	1/1:0,14:14:33.07:614,33,0	0/0:23,0:23:63.21:0,63,1708	0/0:17,0:17:51.18:0,51,1416	1/1:0,9:9:21.07:419,21,0	0/0:14,0:14:42.12:0,42,1022	1/1:0,16:16:45.11:834,45,0	1/1:0,6:6:12.04:240,12,0	1/1:1,17:18:39.13:778,39,0	1/1:0,25:25:57.20:1137,57,0	1/1:0,16:16:39.13:754,39,0	1/1:0,23:23:69.18:1200,69,0	1/1:1,22:22:57.16:1094,57,0	1/1:1,3:4:9.03:180,9,0	1/1:1,3:4:9.03:179,9,0	0/0:10,0:10:30.10:0,30,821	0/0:3,0:3:9.03:0,9,215	1/1:1,25:26:72.25:1437,72,0	1/1:0,27:27:81.24:1532,81,0	1/1:1,26:26:66.23:1317,66,0	1/1:0,11:11:30.10:550,30,0
chr10	68488408	.	GTT	G	6053.06	PASS	AB=1.000;AC=37;AF=0.661;AN=56;BaseQRankSum=-1.829;DP=502;FS=3.403;HRun=11;HaplotypeScore=70.2028;InbreedingCoeff=0.8770;MQ=67.78;MQ0=2;MQRankSum=2.320;QD=19.72;ReadPosRankSum=3.231;VQSLOD=4.2205;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:35:95.75:0,96,1267	1/1:0,2:2:6.02:64,6,0	0/0:21,0:15:24.56:0,25,249	0/0:17,0:8:5.67:0,6,27	0/0:23,0:25:74.72:0,75,1045	1/1:1,15:16:42.10:447,42,0	1/1:2,12:14:33.08:351,33,0	1/1:27,0:27:18.29:216,18,0	1/1:1,13:14:30.07:319,30,0	0/1:27,0:26:23.83:24,0,308	0/0:20,0:20:29.94:0,30,356	1/1:3,12:15:33.07:351,33,0	0/0:15,0:16:38.76:0,39,502	1/1:4,9:14:11.69:163,12,0	1/1:1,10:11:24.05:255,24,0	1/1:1,7:8:21.05:223,21,0	1/1:2,23:25:57.14:607,57,0	0/0:10,0:31:56.42:0,56,279	1/1:4,8:13:14.97:208,15,0	1/1:2,15:18:33.02:406,33,0	1/1:3,9:12:21:223,21,0	1/1:0,13:13:36.08:383,36,0	0/0:18,0:19:39.12:0,39,560	0/0:11,0:11:33.10:0,33,479	1/1:4,15:20:30.01:375,30,0	1/1:6,24:30:72.15:766,72,0	1/1:3,10:13:26.89:287,27,0	1/1:1,14:15:36.09:383,36,0
chr10	68488410	.	T	TTTG	1949.12	PASS	AB=1.000;AC=14;AF=0.250;AN=56;BaseQRankSum=-6.075;DP=496;FS=0.900;HRun=0;HaplotypeScore=92.4134;InbreedingCoeff=0.1658;MQ=66.86;MQ0=2;MQRankSum=2.155;QD=9.94;ReadPosRankSum=-5.497;VQSLOD=1.5922;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:95.14:0,95,1380	0/0:2,0:2:5.99:0,6,47	0/0:19,0:14:3.62:0,4,242	0/0:15,0:6:0.77:0,1,55	0/0:26,0:26:77.46:0,77,1117	0/0:16,0:16:44.90:0,45,357	0/1:14,0:14:94.73:95,0,124	1/1:1,29:31:68.71:801,69,0	0/1:14,0:14:5.49:5,0,184	1/1:24,1:24:70.31:571,70,0	1/1:21,0:21:49.72:373,50,0	0/0:14,0:14:7.05:0,7,259	0/0:15,0:15:41.84:0,42,545	0/0:14,0:14:26.47:0,26,210	0/0:10,0:10:20.55:0,21,178	0/1:7,0:7:42.81:43,0,97	0/0:25,0:25:28:0,28,416	0/0:31,0:31:67.68:0,68,612	0/1:14,0:14:97.04:97,0,121	0/1:17,0:17:16.65:17,0,264	0/1:11,0:11:10.93:11,0,121	0/1:13,0:13:56.85:57,0,194	0/0:19,0:19:53.98:0,54,725	0/0:11,0:11:33.10:0,33,513	0/0:21,0:21:47.92:0,48,394	0/1:29,0:29:46.48:46,0,491	0/0:13,0:13:1.05:0,1,208	0/0:14,0:14:35.92:0,36,284
chr10	68488411	.	T	TTG	1995.30	PASS	AB=1.000;AC=6;AF=0.107;AN=56;BaseQRankSum=-8.895;DP=490;FS=0.000;HRun=0;HaplotypeScore=83.5769;InbreedingCoeff=0.6287;MQ=66.90;MQ0=1;MQRankSum=3.649;QD=21.69;ReadPosRankSum=-2.545;VQSLOD=3.3969;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:82.31:0,82,1264	0/0:2,0:2:5.99:0,6,50	0/0:18,0:13:5.42:0,5,232	0/1:14,0:6:0.52:1,0,42	0/0:26,0:26:77.87:0,78,1074	0/0:16,0:16:44.95:0,45,377	0/0:12,0:12:25.96:0,26,186	0/1:31,0:31:22.54:286,0,23	0/0:14,0:14:31.21:0,31,253	1/1:2,23:24:72.15:1008,72,0	1/1:0,21:22:51.14:829,51,0	0/0:14,0:14:37.22:0,37,307	0/0:15,0:15:41.62:0,42,511	0/0:14,0:14:26.86:0,27,216	0/0:10,0:10:26.91:0,27,217	0/0:7,0:7:17.47:0,17,131	0/0:25,0:25:58.17:0,58,476	0/0:30,0:30:71.82:0,72,632	0/0:14,0:14:27.31:0,27,193	0/0:17,0:17:47.37:0,47,367	0/0:11,0:11:19.23:0,19,153	0/0:13,0:13:33.67:0,34,253	0/0:19,0:19:53.78:0,54,670	0/0:11,0:11:33.10:0,33,484	0/0:20,0:20:47.96:0,48,405	0/0:29,0:29:79.76:0,80,632	0/0:13,0:13:31.21:0,31,253	0/0:14,0:14:35.96:0,36,300
chr10	68488777	.	T	TA	3781.71	PASS	AB=1.000;AC=43;AF=0.768;AN=56;BaseQRankSum=3.283;DP=425;FS=1.658;HRun=2;HaplotypeScore=64.8203;InbreedingCoeff=0.8698;MQ=67.71;MQ0=6;MQRankSum=-0.843;QD=11.53;ReadPosRankSum=2.125;VQSLOD=2.1881;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:86.69:0,87,879	1/1:1,0:1:2.04:6,2,0	0/0:14,0:12:21.23:0,21,214	0/1:11,0:6:0.84:1,0,16	0/0:16,0:16:30:0,30,289	1/1:15,0:15:29.27:200,29,0	1/1:23,0:23:41.32:223,41,0	1/1:24,0:23:45.86:284,46,0	1/1:12,0:12:23.06:138,23,0	1/1:16,0:16:41.06:306,41,0	1/1:9,0:9:17.76:125,18,0	1/1:13,0:13:27.62:203,28,0	0/0:10,0:10:14.11:0,14,157	1/1:13,0:13:21.22:154,21,0	1/1:12,0:12:23.18:157,23,0	1/1:12,0:12:14.48:62,14,0	1/1:31,1:30:47.08:222,47,0	1/1:30,3:33:55.10:329,55,0	1/1:7,8:12:29.89:252,30,0	1/1:4,9:13:29.92:218,30,0	1/1:20,2:21:20.78:271,21,0	1/1:2,1:3:6.38:52,6,0	0/0:10,0:10:25.99:0,26,242	0/0:10,0:10:14.76:0,15,173	1/1:12,0:12:25.64:139,26,0	1/1:16,0:16:38.76:242,39,0	1/1:14,0:14:28.63:172,29,0	1/1:7,0:7:7.23:23,7,0
chr10	68489115	.	ATT	A	7188.71	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=3.335;DP=508;FS=3.264;HRun=12;HaplotypeScore=68.7272;InbreedingCoeff=0.9408;MQ=73.99;MQ0=1;MQRankSum=2.115;QD=22.12;ReadPosRankSum=4.567;VQSLOD=4.6482;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:34:83.70:0,84,1112	1/1:1,6:7:18.04:183,18,0	0/0:20,0:15:28.81:0,29,345	0/0:15,0:14:0.60:0,1,137	0/0:27,0:29:74.22:0,74,1028	1/1:2,19:22:53.85:531,54,0	1/1:2,10:13:20.95:266,21,0	1/1:10,15:25:41.88:405,42,0	1/1:2,17:21:32.52:369,33,0	0/0:15,0:16:44.63:0,45,620	0/0:14,0:15:38.61:0,39,526	1/1:1,16:17:36.08:366,36,0	0/0:14,0:16:41.61:0,42,552	1/1:1,16:17:42.08:427,42,0	1/1:0,21:20:51.12:519,51,0	1/1:1,13:15:35.82:348,36,0	1/1:1,11:12:27.06:275,27,0	1/1:1,15:16:42.09:427,42,0	1/1:5,14:20:25.78:417,26,0	1/1:4,10:15:20.75:266,21,0	1/1:5,18:24:44.78:510,45,0	1/1:0,7:7:15.02:152,15,0	0/0:17,0:21:58.64:0,59,731	0/0:16,0:16:45.11:0,45,643	1/1:1,14:15:42.08:427,42,0	1/1:6,15:21:6.52:416,7,0	1/1:4,20:24:54.09:549,54,0	1/1:0,13:13:33.07:336,33,0
chr10	68489378	.	CAGT	C	1066.52	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.414;DP=486;FS=2.002;HRun=0;HaplotypeScore=72.0274;InbreedingCoeff=0.9802;MQ=88.32;MQ0=0;MQRankSum=-4.703;QD=42.66;ReadPosRankSum=-0.636;VQSLOD=4.3466;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:60.21:0,60,1382	0/0:5,0:5:15.05:0,15,346	0/0:29,0:27:75:0,75,1621	0/0:33,0:32:89.89:0,90,1837	0/0:20,0:20:56.94:0,57,1312	0/0:10,0:10:27.09:0,27,621	0/0:15,0:15:45.15:0,45,993	0/0:23,0:23:69.24:0,69,1550	0/0:19,0:19:54.19:0,54,1245	1/1:0,9:9:27.08:435,27,0	1/1:0,16:16:45.15:753,45,0	0/0:9,0:9:27.09:0,27,623	0/0:20,0:20:60.21:0,60,1359	0/0:15,0:15:45.15:0,45,1017	0/0:21,0:21:63.22:0,63,1408	0/0:20,0:20:60.21:0,60,1362	0/0:26,0:26:78.27:0,78,1776	0/0:18,0:18:54.19:0,54,1242	0/0:13,0:13:39.13:0,39,898	0/0:20,0:20:60.21:0,60,1315	0/0:16,0:16:45.15:0,45,1036	0/0:5,0:5:15.05:0,15,344	0/0:14,0:14:39.13:0,39,878	0/0:24,0:24:72.25:0,72,1652	0/0:14,0:14:42.13:0,42,925	0/0:23,0:23:63.22:0,63,1431	0/0:21,0:21:60.21:0,60,1345	0/0:7,0:7:21.07:0,21,484
chr10	68490574	.	A	AGCGCGCGCGCGC	7938.41	PASS	AB=0.808;AC=32;AF=0.667;AN=48;BaseQRankSum=3.195;DP=510;FS=0.000;HRun=0;HaplotypeScore=176.8414;InbreedingCoeff=0.6602;MQ=63.49;MQ0=3;MQRankSum=-9.252;QD=28.66;ReadPosRankSum=-1.584;VQSLOD=3.8782;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:58.77:0,59,1865	1/1:7,0:6:5.99:67,6,0	0/0:26,0:17:39.13:0,39,1239	0/0:21,0:18:51.12:0,51,1551	0/0:20,0:20:30.09:0,30,1040	./.	1/1:12,0:20:8.99:199,9,0	1/1:28,0:28:72.73:649,73,0	1/1:5,0:5:3.01:39,3,0	1/1:13,0:30:44.54:616,45,0	1/1:2,0:12:8.86:99,9,0	./.	0/0:21,0:20:51.14:0,51,1472	0/1:10,7:17:35.63:278,0,36	1/1:10,7:20:2.75:179,3,0	1/1:8,0:11:6.49:195,6,0	1/1:12,6:18:24.08:1010,24,0	0/1:14,0:15:4.92:888,0,5	1/1:3,9:14:39.12:1074,39,0	1/1:8,8:16:2.94:100,3,0	1/1:7,5:11:3.01:182,3,0	./.	0/0:16,0:16:42.14:0,42,1537	0/0:43,0:43:99:0,114,3758	./.	1/1:18,8:24:25.68:852,26,0	1/1:5,4:8:11.58:554,12,0	1/1:3,8:11:18.06:957,18,0
chr10	68490576	.	C	CGTGT	2019.21	PASS	AB=0.833;AC=40;AF=0.800;AN=50;BaseQRankSum=5.670;DP=558;FS=1.604;HRun=0;HaplotypeScore=196.8926;InbreedingCoeff=0.5542;MQ=55.19;MQ0=3;MQRankSum=-6.654;QD=4.90;ReadPosRankSum=-1.590;VQSLOD=2.7265;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:29,18:52:18.05:366,18,0	./.	./.	./.	0/1:11,0:22:0:0,0,0	1/1:21,0:21:8.56:126,9,0	1/1:26,0:25:3.79:21,4,0	1/1:29,0:29:11.95:67,12,0	0/1:9,0:9:0:0,0,0	1/1:26,0:25:29.85:306,30,0	1/1:11,0:11:5.67:65,6,0	1/1:9,0:9:6.01:113,6,0	0/0:20,0:23:7.05:0,7,224	1/1:21,0:19:2.95:19,3,0	1/1:17,0:17:5.77:62,6,0	1/1:12,0:12:10.30:123,10,0	1/1:22,0:21:18.78:187,19,0	0/0:15,0:15:10.27:0,10,124	1/1:15,0:13:6.02:97,6,0	1/1:18,0:18:2.95:24,3,0	1/1:15,0:13:3.01:41,3,0	1/1:12,0:12:3:25,3,0	0/0:16,0:16:15.03:0,15,200	0/0:42,0:42:65.74:0,66,764	1/1:20,0:20:3.01:35,3,0	1/1:29,0:27:26.85:322,27,0	1/1:15,0:14:4.98:46,5,0	1/1:11,0:11:14.92:116,15,0
chr10	68490715	.	CTCTTT	C	1244.30	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.535;DP=534;FS=0.000;HRun=0;HaplotypeScore=102.4827;InbreedingCoeff=0.9850;MQ=74.35;MQ0=4;MQRankSum=-5.392;QD=40.14;ReadPosRankSum=2.005;VQSLOD=3.6686;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,117,3231	0/0:6,0:6:15.05:0,15,404	0/0:51,0:32:66.47:0,66,1377	0/0:33,0:19:26.99:0,27,657	0/0:24,0:24:60.19:0,60,1644	0/0:18,0:18:45.03:0,45,1000	0/0:15,0:15:36.12:0,36,963	0/0:22,0:23:48.16:0,48,1292	0/0:8,0:8:21.03:0,21,464	1/1:5,9:14:27.09:516,27,0	1/1:5,12:17:45.15:850,45,0	0/0:15,0:15:33.11:0,33,959	0/0:8,0:8:24.04:0,24,565	0/0:15,0:15:36.09:0,36,963	0/0:13,0:13:39.12:0,39,1085	0/0:10,0:10:27.08:0,27,734	0/0:30,0:30:72.25:0,72,1981	0/0:23,0:23:48.16:0,48,1401	0/0:11,0:11:24.01:0,24,599	0/0:18,0:18:45.14:0,45,1222	0/0:20,0:20:42.13:0,42,1152	0/0:15,0:15:30.10:0,30,862	0/0:19,0:19:36.11:0,36,988	0/0:19,0:18:36.12:0,36,1041	0/0:15,0:15:33.11:0,33,896	0/0:15,0:15:33.11:0,33,860	0/0:13,0:13:33.11:0,33,973	0/0:20,0:20:39.10:0,39,1008
chr10	68490744	.	TCG	T	941.38	PASS	AB=0.966;AC=5;AF=0.089;AN=56;BaseQRankSum=7.897;DP=468;FS=0.761;HRun=0;HaplotypeScore=61.7717;InbreedingCoeff=0.7353;MQ=57.20;MQ0=15;MQRankSum=-5.327;QD=15.69;ReadPosRankSum=-0.450;VQSLOD=3.3704;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,120,2022	0/0:5,0:5:15.05:0,15,254	0/1:27,1:11:23.73:24,0,168	0/0:15,0:5:6.02:0,6,95	0/0:24,0:24:60.19:0,60,982	0/0:12,0:12:36.12:0,36,594	0/0:19,0:16:36.10:0,36,608	0/0:27,0:26:63.13:0,63,928	0/0:7,0:7:18.06:0,18,299	1/1:2,12:12:30.10:465,30,0	1/1:2,12:17:42.06:582,42,0	0/0:13,0:13:39.13:0,39,693	0/0:12,0:11:33.10:0,33,526	0/0:13,0:13:30.08:0,30,492	0/0:17,0:16:39.13:0,39,691	0/0:12,0:12:36.10:0,36,614	0/0:25,0:25:72.25:0,72,1292	0/0:26,0:25:69.23:0,69,1182	0/0:12,0:9:24.01:0,24,305	0/0:14,0:13:30.10:0,30,536	0/0:14,0:14:39.13:0,39,684	0/0:13,0:13:30.10:0,30,520	0/0:16,0:16:39.02:0,39,633	0/0:15,0:15:45.15:0,45,815	0/0:8,0:8:21.07:0,21,364	0/0:14,0:12:27.09:0,27,471	0/0:16,0:16:45.15:0,45,783	0/0:14,0:13:36.10:0,36,562
chr10	68491744	.	CT	C	13941.63	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=11.543;DP=682;FS=1.260;HRun=3;HaplotypeScore=73.5731;InbreedingCoeff=1.0000;MQ=86.22;MQ0=0;MQRankSum=-4.175;QD=34.77;ReadPosRankSum=5.609;VQSLOD=5.1252;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,114,1557	1/1:0,18:18:48.15:595,48,0	0/0:31,0:30:69.19:0,69,955	0/0:23,0:23:60.03:0,60,778	0/0:28,0:28:84.27:0,84,1190	1/1:0,24:24:69.22:855,69,0	1/1:0,15:15:45.14:558,45,0	0/0:42,0:42:99:0,123,1756	1/1:1,18:19:45.14:557,45,0	0/0:23,0:22:69.23:0,69,978	0/0:25,0:25:75.25:0,75,1080	1/1:0,16:16:45.14:558,45,0	0/0:19,0:19:57.19:0,57,820	1/1:1,15:16:42.13:520,42,0	1/1:1,27:28:81.25:1004,81,0	1/1:0,25:25:75.24:929,75,0	1/1:1,29:30:81.25:1004,81,0	0/0:17,0:17:51.17:0,51,720	1/1:1,21:22:60.19:743,60,0	1/1:1,24:25:66.21:818,66,0	1/1:2,35:37:99:1227,99,0	1/1:0,22:22:66.21:818,66,0	0/0:18,0:18:45.15:0,45,637	0/0:17,0:17:45.15:0,45,647	1/1:0,24:24:72.23:893,72,0	1/1:0,27:27:81.25:1004,81,0	1/1:1,37:38:99:1300,105,0	1/1:0,15:15:45.14:558,45,0
chr10	68492708	.	A	AC	770.31	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-5.826;DP=568;FS=1.697;HRun=6;HaplotypeScore=54.0918;InbreedingCoeff=0.9917;MQ=88.15;MQ0=0;MQRankSum=-2.813;QD=26.56;ReadPosRankSum=-4.017;VQSLOD=2.1297;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:87.17:0,87,879	0/0:10,0:10:30.07:0,30,306	0/0:20,0:20:50.88:0,51,478	0/0:21,0:21:29.49:0,29,446	0/0:28,0:27:84.18:0,84,850	0/0:20,0:20:60.12:0,60,606	0/0:16,0:16:45.10:0,45,459	1/1:5,24:29:69.22:865,69,0	0/0:22,0:22:63.14:0,63,643	0/0:16,0:16:45.10:0,45,459	0/0:27,0:27:75.16:0,75,764	0/0:13,0:13:30.07:0,30,306	0/0:23,0:23:69.13:0,69,690	0/0:18,0:18:51.12:0,51,520	0/0:16,0:16:42.09:0,42,429	0/0:15,0:15:42.09:0,42,423	0/0:22,0:22:63.10:0,63,633	0/0:11,0:11:24.02:0,24,236	0/0:19,0:18:51.04:0,51,499	0/0:30,0:30:87.19:0,87,887	0/0:30,0:30:84.19:0,84,857	0/0:23,0:23:69.16:0,69,703	0/0:34,0:34:93.21:0,93,948	0/0:14,0:14:33.07:0,33,337	0/0:11,0:11:33.08:0,33,337	0/0:25,0:25:69.16:0,69,703	0/0:13,0:13:39.09:0,39,398	0/0:9,0:9:21.05:0,21,214
chr10	68492845	.	GAA	G	5824.27	PASS	AB=0.556;AC=41;AF=0.732;AN=56;BaseQRankSum=8.875;DP=533;FS=7.872;HRun=14;HaplotypeScore=75.3936;InbreedingCoeff=0.8655;MQ=60.11;MQ0=22;MQRankSum=-0.080;QD=16.36;ReadPosRankSum=4.909;VQSLOD=3.8081;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:44:99:0,113,1422	1/1:2,6:8:14.99:139,15,0	0/0:22,0:12:22.93:0,23,231	0/0:24,0:4:4.56:0,5,45	0/0:29,0:31:56.18:0,56,669	1/1:5,9:16:7.59:221,8,0	0/1:3,12:15:1.83:170,0,2	1/1:9,12:23:31.83:298,32,0	1/1:5,16:22:32.88:351,33,0	1/1:5,19:24:53.82:498,54,0	1/1:9,7:16:17.93:166,18,0	1/1:1,9:10:27.02:250,27,0	0/0:12,0:12:32.55:0,33,376	1/1:3,6:9:20.75:178,21,0	1/1:2,17:20:44.77:401,45,0	1/1:6,7:15:18.82:200,19,0	1/1:3,14:18:29.65:309,30,0	1/1:6,11:17:33.68:305,34,0	1/1:8,7:16:8.62:177,9,0	1/1:2,17:20:41.70:372,42,0	1/1:1,12:14:27.02:250,27,0	1/1:4,12:15:32.97:305,33,0	0/0:19,1:19:5.30:0,5,341	0/0:18,0:18:48.15:0,48,647	1/1:6,11:16:33.01:305,33,0	1/1:7,14:21:32.85:305,33,0	1/1:2,17:18:39.03:361,39,0	1/1:3,10:13:29.75:262,30,0
chr10	68493530	.	CT	C	377.03	PASS	AB=0.964;AC=4;AF=0.071;AN=56;BaseQRankSum=5.720;DP=745;FS=0.000;HRun=4;HaplotypeScore=69.3591;InbreedingCoeff=0.5394;MQ=68.80;MQ0=0;MQRankSum=-2.578;QD=8.77;ReadPosRankSum=-0.277;VQSLOD=0.2249;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,99,1366	0/0:14,0:14:33.11:0,33,462	0/1:12,1:12:1.27:1,0,114	0/1:16,0:14:12.45:12,0,120	0/0:31,0:31:87.28:0,87,1201	0/0:25,0:25:75.25:0,75,1048	0/0:17,0:17:51.16:0,51,697	0/0:34,0:34:93.31:0,93,1303	0/0:19,0:19:54.17:0,54,739	0/0:31,0:30:90.29:0,90,1245	0/0:32,0:32:96.31:0,96,1325	0/0:25,0:25:72.24:0,72,1008	0/0:19,0:19:54.18:0,54,756	0/0:31,0:31:93.27:0,93,1253	0/0:29,0:29:84.28:0,84,1176	0/0:20,0:20:60.19:0,60,821	0/0:26,0:26:75.22:0,75,1030	1/1:0,14:14:39.12:468,39,0	0/0:28,0:28:75.24:0,75,1034	0/0:37,0:37:99:0,108,1495	0/0:36,0:36:99:0,108,1494	0/0:26,0:26:72.23:0,72,990	0/0:31,0:31:84.26:0,84,1143	0/0:27,0:27:72.24:0,72,1006	0/0:30,0:30:87.29:0,87,1216	0/0:36,0:36:99:0,108,1512	0/0:30,0:30:90.30:0,90,1259	0/0:33,0:33:90.30:0,90,1260
chr10	68494750	.	TTTTG	T	2629.49	PASS	AC=8;AF=0.148;AN=54;BaseQRankSum=11.779;DP=664;FS=6.193;HRun=0;HaplotypeScore=105.1988;InbreedingCoeff=0.9890;MQ=65.93;MQ0=2;MQRankSum=1.047;QD=30.22;ReadPosRankSum=-1.891;VQSLOD=2.9686;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,102,2253	0/0:6,0:6:18.06:0,18,415	0/0:26,0:21:33.01:0,33,551	0/0:19,0:17:12.35:0,12,265	0/0:29,0:29:66.22:0,66,1365	0/0:24,0:24:51.14:0,51,1115	0/0:22,0:22:54.09:0,54,1088	1/1:12,11:23:33.07:464,33,0	0/0:17,0:17:39.13:0,39,904	1/1:4,27:31:84.19:1246,84,0	1/1:2,19:21:51.04:693,51,0	0/0:23,0:23:51.09:0,51,1104	0/0:21,0:21:51.18:0,51,1210	0/0:25,0:25:63.20:0,63,1413	0/0:30,0:30:81.21:0,81,1789	0/0:22,0:22:51.18:0,51,1206	0/0:30,2:32:38:0,38,1844	1/1:3,9:12:26.92:385,27,0	0/0:18,0:17:33.11:0,33,742	0/0:33,0:33:28.48:0,28,1648	0/0:26,0:26:60.15:0,60,1163	0/0:21,0:21:45.14:0,45,972	0/0:35,0:35:84.27:0,84,1882	0/0:25,0:25:72.22:0,72,1478	0/0:21,0:21:48.16:0,48,971	0/0:28,0:28:72.24:0,72,1615	0/0:27,0:27:63.21:0,63,1380	./.
chr10	68494941	.	GA	G	1201.74	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=4.827;DP=590;FS=1.870;HRun=8;HaplotypeScore=82.0996;InbreedingCoeff=0.9914;MQ=66.11;MQ0=2;MQRankSum=0.712;QD=19.70;ReadPosRankSum=-1.448;VQSLOD=3.0399;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:87.21:0,87,1012	0/0:6,0:6:15.05:0,15,181	0/0:19,0:14:42.03:0,42,458	0/0:21,0:18:45.88:0,46,567	0/0:28,0:28:75.20:0,75,873	0/0:22,0:22:63.18:0,63,749	0/0:18,0:18:51.11:0,51,599	0/0:33,0:33:72.21:0,72,861	0/0:22,0:22:66.19:0,66,787	1/1:4,23:27:32.83:593,33,0	1/1:2,19:20:54.08:520,54,0	0/0:21,0:21:57.17:0,57,679	0/0:16,0:16:45.14:0,45,543	0/0:12,0:12:33.09:0,33,383	0/0:26,0:26:60.17:0,60,713	0/0:17,0:17:21.06:0,21,254	0/0:34,0:34:81.22:0,81,964	1/1:4,9:12:23.72:231,24,0	0/0:11,0:11:27.07:0,27,315	0/0:26,0:26:66.19:0,66,780	0/0:24,0:24:63.18:0,63,749	0/0:20,0:20:51.16:0,51,616	0/0:11,0:11:30.09:0,30,362	0/0:32,0:32:69.21:0,69,833	0/0:22,0:22:60.18:0,60,725	0/0:22,0:22:54.17:0,54,652	0/0:18,0:18:42.13:0,42,507	0/0:15,0:15:45.14:0,45,543
chr10	68495014	.	CTG	C	424.57	PASS	AB=0.989;AC=18;AF=0.321;AN=56;BaseQRankSum=8.479;DP=497;FS=7.780;HRun=0;HaplotypeScore=125.6240;InbreedingCoeff=-0.0239;MQ=46.99;MQ0=30;MQRankSum=2.605;QD=1.46;ReadPosRankSum=1.717;VQSLOD=1.9323;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:21:36.12:0,36,657	0/0:11,0:11:5.74:0,6,37	0/0:6,0:1:3.01:0,3,43	0/0:7,0:4:9.03:0,9,127	0/0:17,0:15:27.09:0,27,507	0/1:19,0:19:14.37:32,0,14	0/1:22,0:21:14.28:14,0,43	0/0:21,0:17:44.89:0,45,485	1/1:17,0:16:2.80:33,3,0	0/1:17,0:15:99:180,0,130	0/1:10,0:10:23.25:23,0,51	0/1:14,0:14:4.44:52,0,4	0/0:16,0:14:30.76:0,31,212	0/0:12,0:11:8.84:0,9,57	0/1:27,3:30:0:0,0,0	1/1:14,2:16:2.97:10,3,0	0/1:30,0:29:76.23:76,0,76	0/0:12,0:12:1.90:0,2,227	0/0:17,0:15:21.66:0,22,206	0/0:17,0:17:11.04:0,11,59	0/1:19,0:14:7.32:26,0,7	1/1:19,0:17:6.96:20,7,0	0/0:15,0:13:32.46:0,32,243	0/0:33,0:31:62.53:0,63,651	0/1:19,0:15:19.86:20,0,24	0/1:23,0:23:73.60:74,0,209	0/1:25,1:25:11.52:12,0,101	0/1:10,0:10:7.22:7,0,39
chr10	68495018	.	CTG	C	872.33	PASS	AB=0.974;AC=26;AF=0.481;AN=54;BaseQRankSum=8.344;DP=498;FS=3.684;HRun=0;HaplotypeScore=127.9094;InbreedingCoeff=-0.0440;MQ=46.39;MQ0=32;MQRankSum=3.485;QD=2.34;ReadPosRankSum=0.479;VQSLOD=2.1664;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:21:33.11:0,33,611	0/1:11,0:11:15.98:16,0,18	./.	0/0:4,0:2:3.01:0,3,40	0/0:16,0:14:27.09:0,27,500	0/1:17,1:18:11.14:11,0,17	1/1:27,0:26:17.54:73,18,0	0/1:14,0:15:46.79:47,0,274	1/1:14,2:15:6.06:71,6,0	0/1:18,0:16:85.72:184,0,86	0/1:9,0:9:3.21:3,0,49	1/1:15,1:16:15.35:92,15,0	0/1:16,0:14:9.40:9,0,112	0/0:12,0:11:4.53:0,5,32	0/1:30,0:30:0:0,0,0	1/1:15,0:15:2.60:10,3,0	0/1:30,1:30:33.40:67,0,33	0/1:12,0:11:96.26:96,0,106	0/1:19,0:17:91.98:92,0,181	0/0:17,0:17:9.92:0,10,58	0/1:18,0:13:5.08:5,0,11	1/1:20,0:18:12.10:72,12,0	0/0:15,0:13:6.77:0,7,170	0/0:35,0:33:46.09:0,46,471	1/1:19,0:15:1.16:24,1,0	0/1:23,2:24:99:116,0,167	0/1:25,0:23:32.98:33,0,45	0/1:9,0:9:2.65:9,0,3
chr10	68495020	.	G	GTC	4064.93	PASS	AB=0.807;AC=34;AF=0.654;AN=52;BaseQRankSum=5.654;DP=503;FS=14.808;HRun=0;HaplotypeScore=126.2971;InbreedingCoeff=0.2159;MQ=46.07;MQ0=34;MQRankSum=4.053;QD=9.41;ReadPosRankSum=1.521;VQSLOD=2.8166;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:21:32.50:0,33,470	0/1:2,9:11:0:0,0,0	./.	./.	0/0:16,0:14:26.82:0,27,338	1/1:18,0:17:6.22:229,6,0	1/1:28,0:27:34.03:396,34,0	0/0:19,0:15:9.19:0,9,161	1/1:16,0:15:27.90:384,28,0	0/1:19,0:16:11.13:11,0,67	0/0:9,0:9:4.63:0,5,68	1/1:14,0:15:26.01:239,26,0	0/1:16,0:14:10.02:10,0,11	0/1:2,10:11:11.23:49,0,11	0/1:13,19:32:0.05:0,0,0	1/1:3,12:15:2.60:10,3,0	1/1:30,0:29:56.72:654,57,0	0/1:13,0:12:10.41:10,0,97	0/1:12,9:19:80.59:300,0,81	1/1:5,12:17:6.67:49,7,0	1/1:19,0:14:5.18:94,5,0	1/1:21,0:18:14.41:216,14,0	1/1:15,0:13:7.80:55,8,0	0/1:36,0:34:15.32:15,0,139	1/1:18,0:14:30.10:458,30,0	0/1:24,0:23:51.05:503,0,51	0/1:12,14:25:1.52:138,0,2	1/1:9,0:9:14.44:244,14,0
chr10	68495022	.	CTG	C	3131.18	PASS	AB=0.987;AC=37;AF=0.712;AN=52;BaseQRankSum=0.347;DP=508;FS=18.572;HRun=0;HaplotypeScore=123.7857;InbreedingCoeff=0.2279;MQ=45.96;MQ0=33;MQRankSum=-0.311;QD=7.04;ReadPosRankSum=0.450;VQSLOD=2.0528;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:22:30.76:0,31,287	0/0:9,0:9:0:0,0,1	./.	./.	0/0:17,0:15:26.44:0,26,183	1/1:17,0:16:4.14:104,4,0	0/1:28,0:27:16.15:189,0,16	1/1:19,0:15:5.57:40,6,0	1/1:17,0:16:12.89:181,13,0	1/1:20,0:17:29.04:224,29,0	0/1:8,0:8:5.83:10,0,6	1/1:16,0:16:22.08:201,22,0	1/1:16,0:14:29.92:260,30,0	0/0:12,0:11:6.01:0,6,58	1/1:28,5:33:2.66:41,3,0	1/1:14,2:16:5.35:30,5,0	0/1:30,1:30:1.39:361,0,1	0/1:13,0:12:57.07:72,0,57	1/1:21,0:19:11.88:101,12,0	1/1:15,0:15:6.19:30,6,0	1/1:18,0:13:3.69:44,4,0	0/1:23,0:20:10.09:98,0,10	1/1:17,0:15:29.47:242,29,0	0/1:37,1:36:64.27:318,0,64	1/1:18,0:14:26.79:209,27,0	1/1:24,0:23:44.25:350,44,0	0/1:27,1:26:2.22:50,0,2	1/1:9,0:9:18.09:127,18,0
chr10	68495028	.	C	CTG	207.73	PASS	AB=0.985;AC=10;AF=0.192;AN=52;BaseQRankSum=6.264;DP=507;FS=3.271;HRun=0;HaplotypeScore=131.6337;InbreedingCoeff=-0.0771;MQ=45.47;MQ0=33;MQRankSum=3.845;QD=0.97;ReadPosRankSum=1.950;VQSLOD=2.5066;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:24:34.31:0,34,242	0/0:10,0:10:2.67:0,3,25	./.	./.	0/0:16,0:14:23.92:0,24,189	0/0:17,0:16:1.22:0,1,37	0/1:25,1:25:2.06:2,0,20	0/0:18,0:13:26.71:0,27,181	1/1:14,0:13:5.30:56,5,0	0/0:16,0:14:31.38:0,31,212	0/0:6,0:6:8.87:0,9,65	0/1:17,1:18:9.49:48,0,9	0/1:16,0:14:6.80:7,0,140	0/0:12,0:11:5.34:0,5,28	0/1:32,0:32:5.05:5,0,46	0/0:15,0:15:3.48:0,3,12	0/1:33,1:33:83.09:144,0,83	0/0:13,0:11:23.14:0,23,184	0/1:25,0:21:11.85:12,0,189	0/0:13,0:13:5.49:0,5,35	0/0:19,0:14:4.33:0,4,52	0/0:23,0:20:19.62:0,20,126	0/0:16,0:14:24.77:0,25,197	0/0:39,0:37:49.80:0,50,611	0/0:17,2:15:1.85:0,2,47	0/1:26,0:25:19.25:19,0,170	0/1:24,0:22:41.08:41,0,65	0/0:11,0:11:11.17:0,11,59
chr10	68495251	.	GTGTGTGTGTGTGTA	G	3577.93	PASS	AB=1.000;AC=39;AF=0.696;AN=56;BaseQRankSum=-3.198;DP=513;FS=5.577;HRun=0;HaplotypeScore=161.3251;InbreedingCoeff=0.3505;MQ=51.02;MQ0=18;MQRankSum=-1.728;QD=9.22;ReadPosRankSum=-5.568;VQSLOD=0.2180;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:25:29.77:0,30,1710	0/1:5,0:5:29:47,0,29	1/1:7,0:5:2.04:6,2,0	0/1:19,0:6:0:0,0,0	0/0:18,0:17:23.63:0,24,886	1/1:20,0:20:29.87:235,30,0	1/1:3,22:24:6.02:190,6,0	0/1:12,0:12:5.61:123,0,6	1/1:22,0:22:2.69:63,3,0	1/1:26,0:24:58.47:438,58,0	1/1:12,0:11:2.92:17,3,0	0/1:13,0:12:16.66:125,0,17	0/0:25,0:25:45.84:0,46,2143	1/1:17,0:17:18.07:167,18,0	1/1:21,0:20:30.85:276,31,0	1/1:12,0:12:3.47:125,3,0	0/1:21,0:21:99:221,0,119	1/1:12,0:11:21.33:157,21,0	0/1:11,0:10:13.40:184,0,13	0/1:12,0:12:28.62:34,0,29	1/1:39,0:37:55.11:444,55,0	1/1:20,0:20:2.92:63,3,0	0/0:20,0:19:19.81:0,20,1267	0/0:35,0:34:47.18:0,47,2285	1/1:14,0:14:20.27:148,20,0	1/1:14,0:12:20.03:169,20,0	1/1:23,0:22:38.76:258,39,0	1/1:11,0:9:6.01:88,6,0
chr10	68495253	.	GTGTGTGTGTGTA	G	4606.26	PASS	AB=1.000;AC=44;AF=0.786;AN=56;BaseQRankSum=-4.114;DP=515;FS=3.016;HRun=0;HaplotypeScore=144.7107;InbreedingCoeff=0.6867;MQ=51.19;MQ0=17;MQRankSum=-1.712;QD=11.87;ReadPosRankSum=-5.705;VQSLOD=1.7009;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:25:29.75:0,30,1457	1/1:5,0:5:9:101,9,0	1/1:7,0:5:4.07:12,4,0	0/1:16,0:5:0:0,0,0	0/0:18,0:17:23.63:0,24,761	1/1:20,0:20:29.89:235,30,0	1/1:25,0:24:6.02:126,6,0	1/1:14,0:14:13.05:182,13,0	1/1:3,19:22:2.80:107,3,0	1/1:25,0:23:58.91:439,59,0	1/1:11,0:10:2.92:17,3,0	1/1:12,0:11:24.42:218,24,0	0/0:24,0:24:45.48:0,45,1815	1/1:19,0:19:35.72:330,36,0	1/1:21,0:20:32.95:289,33,0	1/1:12,0:12:19.82:204,20,0	0/1:21,0:21:85.64:360,0,86	1/1:12,0:11:24.72:178,25,0	1/1:5,6:10:21.57:200,22,0	1/1:12,0:12:10.71:114,11,0	1/1:37,0:35:56.85:458,57,0	1/1:4,17:21:2.92:107,3,0	0/0:22,0:21:25.78:0,26,1130	0/0:36,0:35:50.01:0,50,1897	1/1:14,0:14:24:230,24,0	1/1:13,0:12:27.01:240,27,0	1/1:24,0:23:42.81:301,43,0	1/1:13,1:12:6.02:158,6,0
chr10	68495255	.	GTGTGTGTGTA	G	4384.16	PASS	AB=1.000;AC=43;AF=0.768;AN=56;BaseQRankSum=-3.327;DP=508;FS=3.758;HRun=0;HaplotypeScore=128.9412;InbreedingCoeff=0.7047;MQ=52.38;MQ0=17;MQRankSum=-0.314;QD=11.98;ReadPosRankSum=-5.830;VQSLOD=1.6091;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:25:26.15:0,26,1192	1/1:5,0:5:11.98:99,12,0	1/1:7,0:4:4.07:12,4,0	0/0:14,0:3:2.94:0,3,18	0/0:18,0:17:23.63:0,24,624	1/1:18,0:18:29.89:235,30,0	1/1:25,0:24:6.02:98,6,0	1/1:14,0:14:19:211,19,0	1/1:21,0:21:2.80:76,3,0	1/1:25,0:23:58.33:438,58,0	1/1:11,0:10:2.92:17,3,0	1/1:12,0:11:26.92:214,27,0	0/0:25,0:25:48.36:0,48,1487	1/1:19,0:19:35.39:268,35,0	1/1:20,0:19:32.95:285,33,0	1/1:12,0:12:20.98:182,21,0	0/1:20,0:20:61.56:288,0,62	1/1:13,0:12:27.72:203,28,0	1/1:10,0:9:22.52:181,23,0	1/1:12,0:12:11.87:103,12,0	1/1:35,0:33:56.85:458,57,0	1/1:20,0:20:2.84:75,3,0	0/0:22,0:21:25.77:0,26,953	0/0:36,0:35:49.99:0,50,1555	1/1:15,0:15:26.98:230,27,0	1/1:13,0:12:27.01:240,27,0	1/1:23,0:22:42.81:302,43,0	1/1:4,12:14:6.02:170,6,0
chr10	68495263	.	GTA	G	4591.56	PASS	AB=1.000;AC=47;AF=0.839;AN=56;BaseQRankSum=-1.755;DP=488;FS=7.550;HRun=0;HaplotypeScore=71.6863;InbreedingCoeff=0.3017;MQ=55.03;MQ0=18;MQRankSum=-1.671;QD=10.23;ReadPosRankSum=-3.626;VQSLOD=2.6303;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:24:11.39:11,0,309	1/1:6,0:6:14.98:123,15,0	0/1:9,0:5:7.93:24,0,8	0/1:21,0:12:4.98:5,0,45	0/0:11,6:16:23.28:0,23,246	1/1:17,0:17:29.89:235,30,0	1/1:24,0:23:5.85:34,6,0	1/1:13,0:13:20.75:233,21,0	1/1:20,0:19:2.86:20,3,0	1/1:23,0:21:57.82:450,58,0	1/1:8,0:7:2.92:17,3,0	1/1:12,0:11:29.92:238,30,0	0/1:23,0:23:36.90:37,0,324	1/1:15,0:15:35.74:267,36,0	1/1:20,0:19:38.91:313,39,0	1/1:11,0:11:23.86:186,24,0	1/1:21,0:21:48.55:356,49,0	1/1:16,0:15:40.23:286,40,0	1/1:9,0:7:20.95:173,21,0	1/1:12,0:12:14.92:122,15,0	1/1:30,0:27:56.85:458,57,0	1/1:18,0:18:2.97:20,3,0	0/0:22,0:21:31.56:0,32,411	0/1:36,0:35:50.44:50,0,393	1/1:15,0:15:38.96:326,39,0	1/1:11,0:11:30.01:268,30,0	1/1:18,0:17:41.41:300,41,0	1/1:15,0:13:5.94:41,6,0
chr10	68496097	.	A	AGG	2616.42	PASS	AB=0.906;AC=37;AF=0.661;AN=56;BaseQRankSum=5.538;DP=462;FS=1.180;HRun=0;HaplotypeScore=78.3579;InbreedingCoeff=0.5352;MQ=40.21;MQ0=153;MQRankSum=-1.506;QD=9.91;ReadPosRankSum=0.937;VQSLOD=3.2159;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:26:69.11:0,69,808	1/1:4,0:4:11.86:114,12,0	0/0:46,0:8:11.71:0,12,141	0/0:46,0:9:13:0,13,88	0/0:23,0:18:47.17:0,47,563	1/1:6,0:4:10.58:72,11,0	1/1:15,0:13:32.77:334,33,0	0/1:12,6:8:15.05:210,0,15	1/1:14,0:11:23.22:147,23,0	0/1:10,4:5:11.27:28,0,11	1/1:6,0:2:5.23:42,5,0	0/1:10,0:8:7.29:177,0,7	0/0:11,0:8:24.03:0,24,267	1/1:13,0:10:20.26:171,20,0	1/1:9,0:6:14.58:122,15,0	1/1:11,0:8:23.50:218,24,0	1/1:30,0:12:17.30:130,17,0	0/1:18,0:8:6.63:18,0,7	1/1:19,0:6:15.04:182,15,0	1/1:2,2:2:3.01:37,3,0	1/1:11,0:9:20.55:186,21,0	1/1:5,0:4:8.84:67,9,0	0/0:13,0:8:15.02:0,15,166	0/0:24,0:13:11.69:0,12,142	1/1:9,0:7:20.86:243,21,0	0/1:12,0:6:33.37:85,0,33	1/1:16,0:10:23.29:195,23,0	1/1:20,0:3:5.85:35,6,0
chr10	68496308	.	T	TCA	1114.21	PASS	AB=0.822;AC=26;AF=0.542;AN=48;BaseQRankSum=-2.492;DP=447;FS=3.778;HRun=0;HaplotypeScore=78.7645;InbreedingCoeff=0.0633;MQ=57.51;MQ0=11;MQRankSum=-1.599;QD=4.01;ReadPosRankSum=-0.705;VQSLOD=2.2092;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:2.98:0,3,22	1/1:8,0:8:3.01:42,3,0	./.	./.	0/0:10,0:11:11.69:0,12,92	./.	0/1:20,0:21:2.42:99,0,2	./.	1/1:9,1:10:5.23:51,5,0	0/0:16,0:15:0.72:0,1,1	0/0:6,0:10:5.68:0,6,28	1/1:5,3:7:9.03:132,9,0	0/0:12,0:13:8.85:0,9,78	0/1:11,4:16:23.12:77,0,23	0/1:9,3:12:45.68:117,0,46	1/1:7,1:9:3.01:43,3,0	0/1:24,11:35:99:112,0,108	0/1:16,1:26:21.50:21,0,25	1/1:6,2:7:5.98:64,6,0	1/1:6,4:10:3.01:44,3,0	1/1:18,5:23:6.02:88,6,0	0/0:4,0:4:3.01:0,3,32	0/0:6,0:5:3:0,3,32	0/1:18,5:23:49.28:117,0,49	0/1:14,0:14:18.94:19,0,24	1/1:9,4:13:6.77:61,7,0	0/1:20,8:30:0.39:123,0,0	1/1:4,5:9:3.48:45,3,0
chr10	68496450	.	C	CA	7005.24	PASS	AB=0.520;AC=33;AF=0.589;AN=56;BaseQRankSum=-7.603;DP=377;FS=60.296;HRun=1;HaplotypeScore=35.8992;InbreedingCoeff=0.9249;MQ=75.39;MQ0=0;MQRankSum=-3.940;QD=42.46;ReadPosRankSum=2.529;VQSLOD=0.0503;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:66.22:0,66,923	1/1:0,8:8:21.07:335,21,0	0/0:11,0:11:30.10:0,30,419	0/0:10,0:10:27.07:0,27,339	0/0:26,0:26:69.23:0,69,964	1/1:0,15:15:42.14:671,42,0	1/1:0,4:4:12.04:192,12,0	0/0:36,0:35:99:0,102,1384	1/1:0,5:5:12.04:191,12,0	0/0:32,0:32:93.31:0,93,1300	0/0:15,0:15:45.15:0,45,629	1/1:0,7:7:15.05:240,15,0	0/0:13,0:13:36.12:0,36,503	1/1:0,3:3:9.03:144,9,0	1/1:0,5:5:15.05:240,15,0	1/1:0,6:6:18.06:288,18,0	1/1:0,19:19:51.17:815,51,0	0/0:21,0:21:60.20:0,60,839	1/1:2,10:12:30.10:479,30,0	1/1:0,17:17:48.16:766,48,0	1/1:0,9:9:24.08:384,24,0	1/1:1,8:9:21.07:336,21,0	0/0:15,0:15:39.13:0,39,545	0/0:10,0:10:30.10:0,30,420	1/1:0,15:15:39.13:623,39,0	0/1:1,12:13:2.84:536,0,3	1/1:0,11:11:33.11:527,33,0	1/1:0,7:7:15.05:240,15,0
chr10	68496885	.	GA	G	6000.77	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=15.476;DP=512;FS=1.575;HRun=9;HaplotypeScore=79.6526;InbreedingCoeff=0.9883;MQ=65.31;MQ0=3;MQRankSum=-1.662;QD=21.51;ReadPosRankSum=3.881;VQSLOD=5.6120;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:90.25:0,90,1027	1/1:0,6:6:18.01:165,18,0	0/0:13,0:9:11.82:0,12,117	0/0:22,0:18:36.23:0,36,366	0/0:32,0:32:93.26:0,93,1063	1/1:0,20:20:54.03:494,54,0	1/1:0,5:5:15.01:137,15,0	0/0:30,1:30:53.76:0,54,864	1/1:6,15:21:39:357,39,0	0/0:27,0:27:78.23:0,78,894	0/0:15,0:15:39.10:0,39,440	1/1:4,13:17:30.01:275,30,0	0/0:15,0:15:45.11:0,45,508	1/1:0,18:18:39.02:357,39,0	1/1:3,19:22:57.01:522,57,0	1/1:2,9:11:27.01:247,27,0	1/1:3,14:17:44.86:398,45,0	0/0:16,0:16:39.09:0,39,437	1/1:4,16:20:48.02:439,48,0	1/1:1,10:11:27.01:247,27,0	1/1:0,10:10:24.01:220,24,0	1/1:2,16:17:47.98:431,48,0	0/0:18,0:18:51.15:0,51,588	0/0:12,0:12:36.11:0,36,415	1/1:0,24:24:60.03:549,60,0	1/1:3,23:26:14.05:560,14,0	1/1:3,17:20:36.02:330,36,0	1/1:0,13:13:30.02:275,30,0
chr10	68500633	.	C	CTGATCAGTT	5401.26	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=-2.360;DP=521;FS=21.817;HRun=0;HaplotypeScore=159.3127;InbreedingCoeff=0.8137;MQ=88.72;MQ0=0;MQRankSum=-10.238;QD=83.10;ReadPosRankSum=-3.695;VQSLOD=2.5236;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,111,3412	0/0:8,0:8:24.08:0,24,744	0/0:15,0:15:39.13:0,39,1160	0/0:26,0:26:60.13:0,60,1594	0/0:11,0:11:33.10:0,33,955	0/0:11,0:11:30.09:0,30,855	0/0:18,0:18:54.15:0,54,1491	1/1:24,2:27:78.25:3057,78,0	0/0:17,0:17:48.14:0,48,1419	1/1:7,8:15:42.14:1837,42,0	1/1:1,3:5:9.03:412,9,0	0/0:12,0:12:33.08:0,33,887	0/0:15,0:15:42.13:0,42,1170	0/0:9,0:9:24.08:0,24,745	0/0:18,0:18:54.19:0,54,1563	0/0:18,0:18:54.17:0,54,1603	0/0:31,0:31:84.29:0,84,2504	0/0:23,0:23:66.21:0,66,1895	0/0:22,0:22:57.20:0,57,1754	0/0:18,0:18:48.16:0,48,1483	0/0:53,0:53:99:0,151,4559	0/0:13,0:13:24.08:0,24,744	0/0:9,0:9:27.09:0,27,811	0/0:19,0:19:57.20:0,57,1737	0/0:14,0:14:42.14:0,42,1217	0/1:18,0:18:95.12:95,0,1315	0/0:24,0:24:69.22:0,69,2018	0/0:12,0:12:33.07:0,33,883
chr10	68501432	.	TACACACACACACACACACAC	T	1971.16	PASS	AB=0.847;AC=26;AF=0.520;AN=50;BaseQRankSum=3.356;DP=255;FS=1.434;HRun=0;HaplotypeScore=109.2956;InbreedingCoeff=0.3823;MQ=42.77;MQ0=36;MQRankSum=-3.796;QD=18.77;ReadPosRankSum=0.446;VQSLOD=2.2113;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:12:18.06:0,18,632	1/1:3,2:3:6.02:220,6,0	0/0:21,0:12:1.55:0,2,4	./.	0/0:7,0:5:6.02:0,6,171	0/1:7,0:7:11.95:30,0,12	0/1:13,0:12:6.32:6,0,107	0/0:18,0:15:6.01:0,6,132	1/1:6,0:5:2.99:23,3,0	./.	0/0:5,0:4:2.99:0,3,24	1/1:2,0:2:2.97:20,3,0	0/0:3,0:2:3.01:0,3,138	1/1:4,2:6:8.98:160,9,0	1/1:3,0:3:3.01:87,3,0	1/1:6,0:5:9:168,9,0	0/1:8,0:9:95.79:96,0,153	0/0:7,0:7:13.86:0,14,728	1/1:3,1:4:5.85:173,6,0	1/1:4,1:5:2.98:21,3,0	1/1:12,0:10:11.97:114,12,0	./.	0/0:4,0:4:9.03:0,9,760	0/0:22,0:24:24.08:0,24,1302	1/1:9,2:10:8.89:242,9,0	1/1:5,3:8:15.90:566,16,0	0/0:7,0:7:5.05:0,5,139	0/1:3,2:6:19.60:210,0,20
chr10	68501496	.	AAG	A	2667.39	PASS	AB=1.000;AC=33;AF=0.635;AN=52;BaseQRankSum=0.872;DP=410;FS=5.182;HRun=0;HaplotypeScore=63.5371;InbreedingCoeff=0.8217;MQ=55.15;MQ0=122;MQRankSum=-1.550;QD=13.27;ReadPosRankSum=2.097;VQSLOD=2.5169;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:18:24.83:0,25,625	1/1:6,1:3:3.01:36,3,0	0/0:50,0:9:11.36:0,11,115	0/0:60,0:17:33.46:0,33,307	0/0:12,0:12:24.08:0,24,356	1/1:3,12:13:36.04:396,36,0	1/1:6,4:9:11.87:121,12,0	0/0:8,0:6:0:0,0,0	./.	0/0:4,0:4:5.98:0,6,48	0/1:3,0:3:0:0,0,0	1/1:7,5:5:12.04:142,12,0	0/0:6,0:6:15.05:0,15,226	1/1:7,4:7:9.03:107,9,0	1/1:3,7:8:17.89:192,18,0	1/1:5,9:9:21.06:249,21,0	1/1:6,11:13:24.07:284,24,0	1/1:7,0:8:2.84:14,3,0	1/1:9,5:7:15.05:176,15,0	1/1:6,3:7:18.05:210,18,0	1/1:1,10:8:18.06:213,18,0	1/1:4,5:6:8.86:85,9,0	0/0:7,0:7:18.04:0,18,261	0/0:18,1:18:33.11:0,33,521	1/1:2,12:13:18.01:196,18,0	1/1:15,4:14:23.96:257,24,0	1/1:6,8:9:15.05:178,15,0	./.
chr10	68502019	.	G	GT	499.48	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=1.388;DP=217;FS=2.728;HRun=0;HaplotypeScore=67.2260;InbreedingCoeff=0.2217;MQ=64.65;MQ0=5;MQRankSum=-3.309;QD=11.10;ReadPosRankSum=0.516;VQSLOD=3.9626;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:7:0.34:0,0,65	0/0:6,0:6:6:0,6,50	0/0:20,0:10:11.97:0,12,110	0/0:15,0:8:13.34:0,13,108	0/0:3,0:3:2.94:0,3,18	0/0:4,0:4:1.03:0,1,22	0/0:5,0:5:6.90:0,7,48	1/1:16,14:30:76.69:591,77,0	0/0:6,0:6:5.94:0,6,42	0/0:30,0:27:50.74:0,51,260	0/1:15,0:15:0:1,0,0	0/0:3,0:3:8.71:0,9,57	0/0:7,0:7:11.74:0,12,88	0/0:7,0:7:12.35:0,12,67	0/0:2,0:2:5.98:0,6,47	0/0:2,0:2:2.97:0,3,20	0/0:4,0:4:5.86:0,6,48	0/0:3,0:3:6.02:0,6,27	0/0:5,0:5:6.80:0,7,84	0/0:3,0:3:4.12:0,4,18	0/0:12,0:12:5.74:0,6,81	0/0:5,0:5:6:0,6,53	0/0:4,0:4:5.94:0,6,43	0/0:6,0:5:9:0,9,79	0/0:3,0:3:2.98:0,3,22	0/0:2,0:2:3:0,3,26	0/0:5,0:5:14.27:0,14,96	0/0:2,0:2:2.37:0,2,9
chr10	68502023	.	G	GT	742.52	PASS	AB=0.887;AC=31;AF=0.554;AN=56;BaseQRankSum=3.193;DP=224;FS=4.644;HRun=0;HaplotypeScore=71.2768;InbreedingCoeff=0.1871;MQ=59.20;MQ0=5;MQRankSum=-3.341;QD=5.05;ReadPosRankSum=1.907;VQSLOD=2.7143;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:9:14.57:0,15,124	0/1:3,3:6:14.12:14,0,21	0/0:19,0:10:2.59:0,3,50	0/0:21,0:10:16.86:0,17,119	0/0:3,0:3:2.96:0,3,19	1/1:1,4:5:5.88:44,6,0	1/1:4,0:4:1.29:7,1,0	1/1:16,14:30:67.47:399,67,0	0/1:6,0:6:8.17:48,0,8	0/1:31,0:28:22.75:23,0,60	1/1:15,0:15:2.99:25,3,0	1/1:2,0:2:5.58:27,6,0	0/0:6,0:6:8.67:0,9,59	0/1:5,0:7:5.54:6,0,26	0/1:4,0:4:13.97:14,0,31	1/1:2,0:2:0.89:2,1,0	1/1:2,0:2:3.88:26,4,0	0/0:2,0:2:0.53:0,1,2	1/1:4,0:4:7.50:45,8,0	1/1:2,1:3:3.47:26,3,0	0/1:13,0:14:26.88:66,0,27	0/0:4,0:4:5.99:0,6,50	0/0:3,0:3:3.88:0,4,26	0/0:8,0:7:14.95:0,15,120	1/1:0,2:2:2.98:22,3,0	1/1:2,0:2:3:26,3,0	0/1:4,1:5:13.57:41,0,14	1/1:2,0:3:5.75:43,6,0
chr10	68502026	.	GTGT	G	416.48	PASS	AB=0.960;AC=21;AF=0.389;AN=54;BaseQRankSum=-2.702;DP=237;FS=6.976;HRun=0;HaplotypeScore=81.4334;InbreedingCoeff=0.0005;MQ=56.34;MQ0=6;MQRankSum=2.752;QD=3.06;ReadPosRankSum=-4.323;VQSLOD=-0.3056;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:10,0:9:1.79:31,0,2	0/0:4,0:4:2.97:0,3,20	0/1:20,0:9:0.50:1,0,77	0/1:24,0:11:25.77:26,0,41	1/1:4,0:4:1.25:3,1,0	0/0:5,0:5:6.42:0,6,44	0/0:3,0:3:1.28:0,1,5	0/1:17,10:27:24.20:358,0,24	0/1:7,0:7:1.54:2,0,11	0/0:41,0:38:99:0,110,1251	0/0:23,0:23:1.36:0,1,46	0/0:3,0:3:4.75:0,5,46	0/1:5,0:5:2.68:20,0,3	0/0:5,0:5:5.78:0,6,54	1/1:3,0:3:2.13:5,2,0	0/0:2,0:2:1.88:0,2,39	0/1:2,0:2:4.14:6,0,4	1/1:1,0:2:2.99:24,3,0	0/1:5,0:5:13.29:13,0,49	0/1:4,0:5:4.89:5,0,13	0/1:13,0:13:4.23:22,0,4	./.	1/1:3,0:3:1.77:4,2,0	0/0:8,0:7:5.18:0,5,63	0/1:3,0:3:11.95:20,0,12	1/1:3,0:3:1.72:4,2,0	0/0:3,0:4:6.82:0,7,75	0/0:2,0:2:1.80:0,2,21
chr10	68502033	.	CGT	C	358.86	PASS	AB=1.000;AC=3;AF=0.056;AN=54;BaseQRankSum=3.008;DP=306;FS=2.071;HRun=0;HaplotypeScore=96.1087;InbreedingCoeff=0.3485;MQ=57.38;MQ0=8;MQRankSum=-2.412;QD=6.52;ReadPosRankSum=0.039;VQSLOD=3.0451;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:18:38.11:0,38,542	0/0:4,0:4:3.01:0,3,50	0/1:27,0:12:1.73:2,0,302	0/0:31,0:12:4.11:0,4,215	0/0:8,0:8:12.03:0,12,159	0/0:7,0:7:15.04:0,15,212	0/0:6,0:6:12.04:0,12,173	1/1:16,12:28:13.16:445,13,0	0/0:8,0:8:18.03:0,18,247	0/0:42,0:39:92.24:0,92,785	0/0:27,0:27:10.17:0,10,81	0/0:5,0:5:12.04:0,12,191	0/0:7,0:7:11.82:0,12,129	0/0:4,0:4:9.03:0,9,143	0/0:4,0:4:9.02:0,9,124	0/0:4,0:4:12.04:0,12,189	0/0:3,0:3:9.02:0,9,114	./.	0/0:5,0:5:7.35:0,7,91	0/0:5,0:5:6:0,6,99	0/0:19,0:19:45.11:0,45,635	0/0:4,0:4:9.03:0,9,131	0/0:5,0:5:8.94:0,9,132	0/0:12,0:11:23.57:0,24,370	0/0:5,0:5:12.04:0,12,183	0/0:6,0:6:18.05:0,18,265	0/0:5,0:5:12.04:0,12,191	0/0:4,0:4:12.04:0,12,177
chr10	68502744	.	CA	C	1001.38	PASS	AB=0.802;AC=32;AF=0.571;AN=56;BaseQRankSum=0.302;DP=418;FS=2.014;HRun=16;HaplotypeScore=70.1489;InbreedingCoeff=0.1731;MQ=51.61;MQ0=19;MQRankSum=-2.068;QD=3.00;ReadPosRankSum=2.702;VQSLOD=-0.2817;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:33,3:39:17.15:17,0,299	1/1:2,3:5:11.76:72,12,0	0/0:4,0:3:2.32:0,2,8	0/0:11,0:2:2.97:0,3,20	0/1:18,2:22:28.90:29,0,164	0/1:7,4:12:0.64:77,0,1	1/1:5,3:8:8.37:53,8,0	0/1:14,1:12:10.94:11,0,23	0/1:11,1:12:22.08:28,0,22	0/0:12,0:13:3.96:0,4,39	0/1:8,0:16:10.97:11,0,37	1/1:12,0:12:10.10:50,10,0	0/0:9,0:9:8.90:0,9,64	1/1:13,0:12:5.75:35,6,0	1/1:13,4:15:19.09:119,19,0	1/1:5,2:6:5.28:26,5,0	1/1:28,6:32:27.60:155,28,0	0/0:17,0:17:16.33:0,16,75	0/1:8,5:11:2.39:94,0,2	0/1:14,5:17:13.69:42,0,14	1/1:10,0:10:2.62:18,3,0	1/1:8,6:13:10.72:60,11,0	0/0:14,0:16:16.82:0,17,115	0/0:12,0:12:9.32:0,9,114	0/1:6,5:11:2.28:61,0,2	0/1:16,3:18:30.39:54,0,30	1/1:18,2:20:24.06:136,24,0	1/1:4,1:6:4.91:24,5,0
chr10	68502761	.	GAAAAAGA	G	965.42	PASS	AB=1.000;AC=6;AF=0.107;AN=56;BaseQRankSum=6.758;DP=462;FS=1.622;HRun=0;HaplotypeScore=108.0693;InbreedingCoeff=0.6439;MQ=59.42;MQ0=19;MQRankSum=-2.504;QD=15.08;ReadPosRankSum=-2.028;VQSLOD=1.9368;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:38:99:0,99,2744	0/0:5,0:5:12.03:0,12,248	0/0:14,0:12:23.14:0,23,492	0/1:23,0:6:7.36:7,0,119	0/0:30,0:29:66.55:0,67,1523	0/0:12,0:12:29.82:0,30,641	0/0:8,0:8:21:0,21,503	0/1:13,0:10:6.39:6,0,43	0/0:10,0:10:25.33:0,25,629	1/1:13,2:15:35.32:544,35,0	1/1:4,8:12:27.09:537,27,0	0/0:17,0:16:45.15:0,45,1149	0/0:10,0:10:17.42:0,17,358	0/0:10,0:9:21.06:0,21,394	0/0:24,0:21:52.57:0,53,1291	0/0:9,0:8:11.52:0,12,199	0/0:34,0:31:69.18:0,69,1903	0/0:17,0:16:25.07:0,25,658	0/0:19,0:16:44.54:0,45,858	0/0:17,0:16:36.08:0,36,984	0/0:7,0:7:21.07:0,21,607	0/0:13,0:11:30.10:0,30,923	0/0:15,0:15:15.76:0,16,776	0/0:17,0:17:36.19:0,36,996	0/0:13,0:12:33.09:0,33,873	0/0:20,0:17:47.41:0,47,1018	0/0:28,0:27:78.16:0,78,2148	0/0:10,0:10:24.08:0,24,590
chr10	68502767	.	GA	G	472.08	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.180;DP=466;FS=6.752;HRun=8;HaplotypeScore=64.4998;InbreedingCoeff=0.8680;MQ=63.53;MQ0=16;MQRankSum=-2.292;QD=18.88;ReadPosRankSum=-1.486;VQSLOD=2.9109;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:35:85.89:0,86,961	0/0:6,0:6:9.84:0,10,82	0/0:19,0:15:33.36:0,33,318	0/0:25,0:8:14.15:0,14,120	0/0:29,0:28:62.31:0,62,724	0/0:12,0:12:27.03:0,27,300	0/0:10,0:10:23.10:0,23,260	0/0:6,0:9:5.47:0,5,28	0/0:11,0:11:20.98:0,21,234	1/1:4,10:13:36:326,36,0	1/1:8,3:11:32.88:268,33,0	0/0:19,0:18:46.43:0,46,492	0/0:11,0:11:21.03:0,21,229	0/0:10,0:9:13.17:0,13,121	0/0:23,0:20:48.87:0,49,561	0/0:9,0:9:8.97:0,9,90	0/0:31,0:28:69.54:0,70,796	0/0:17,0:16:27.51:0,28,308	0/0:18,0:17:29.40:0,29,426	0/0:15,0:14:30.09:0,30,361	0/0:7,0:7:21.06:0,21,250	0/0:14,0:12:30.08:0,30,347	0/0:16,0:16:32.14:0,32,345	0/0:16,0:16:33.10:0,33,399	0/0:12,0:11:26.29:0,26,297	0/0:21,0:19:42.13:0,42,507	0/0:31,0:30:87.13:0,87,968	0/0:11,0:11:27.08:0,27,325
chr10	68502868	.	GA	G	5035.85	PASS	AB=0.698;AC=38;AF=0.679;AN=56;BaseQRankSum=3.101;DP=434;FS=0.424;HRun=10;HaplotypeScore=48.0654;InbreedingCoeff=0.7794;MQ=72.34;MQ0=0;MQRankSum=0.433;QD=17.37;ReadPosRankSum=1.615;VQSLOD=5.2376;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:66.16:0,66,719	1/1:0,2:2:6:52,6,0	0/0:20,0:20:27.84:0,28,313	0/0:12,0:10:10.28:0,10,70	0/0:15,1:16:16.06:0,16,405	1/1:1,22:23:50.98:443,51,0	1/1:2,11:13:20.99:182,21,0	1/1:3,18:21:53.98:465,54,0	1/1:3,12:15:29.98:260,30,0	0/0:25,0:25:69.14:0,69,736	0/0:16,1:17:36.04:0,36,371	1/1:0,8:8:21:182,21,0	0/0:10,1:11:4.04:0,4,273	1/1:3,4:7:11.98:104,12,0	0/1:1,12:13:5.35:181,0,5	1/1:0,8:8:18:156,18,0	1/1:3,18:21:17.81:384,18,0	1/1:5,16:21:44.97:390,45,0	1/1:5,12:17:35.98:313,36,0	1/1:1,11:12:32.99:285,33,0	1/1:1,9:10:26.99:234,27,0	1/1:0,3:3:6:52,6,0	0/1:12,2:14:25.02:25,0,205	0/0:13,0:14:38.94:0,39,412	1/1:0,7:7:21:182,21,0	1/1:9,19:28:53.94:460,54,0	1/1:8,20:29:47:397,47,0	1/1:3,15:18:32.99:286,33,0
chr10	68503139	.	GTA	G	424.01	PASS	AC=2;AF=0.042;AN=48;BaseQRankSum=5.032;DP=216;FS=12.213;HRun=0;HaplotypeScore=27.1082;InbreedingCoeff=0.3368;MQ=52.20;MQ0=20;MQRankSum=-3.744;QD=18.44;ReadPosRankSum=-4.161;VQSLOD=0.5086;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:13:30.10:0,30,490	0/0:5,0:5:9.03:0,9,150	./.	0/0:4,0:3:2.84:0,3,16	0/0:7,0:5:3.01:0,3,44	0/0:10,0:10:15.05:0,15,251	0/0:5,0:5:9.03:0,9,143	1/1:9,14:17:42.13:516,42,0	0/0:5,0:5:9.03:0,9,150	./.	./.	0/0:6,0:6:3.01:0,3,47	0/0:9,0:8:12.04:0,12,191	0/0:4,0:4:9.03:0,9,150	0/0:5,0:5:3.01:0,3,50	./.	0/0:15,0:13:30.10:0,30,495	0/0:13,0:9:15.05:0,15,250	0/0:18,0:17:36.12:0,36,593	0/0:5,0:5:9.02:0,9,125	0/0:7,0:5:12.04:0,12,191	0/0:2,0:2:3.01:0,3,50	0/0:3,0:3:3.01:0,3,50	0/0:5,0:5:9.03:0,9,151	0/0:6,0:5:15.05:0,15,251	0/0:5,0:5:12.04:0,12,194	0/0:11,0:10:15.05:0,15,244	0/0:21,0:14:27.09:0,27,450
chr10	68506533	.	A	ATC	1759.65	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=0.452;DP=395;FS=0.635;HRun=0;HaplotypeScore=70.4976;InbreedingCoeff=0.9375;MQ=68.20;MQ0=14;MQRankSum=-0.874;QD=35.19;ReadPosRankSum=-3.654;VQSLOD=4.6614;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:75.24:0,75,948	0/0:8,0:8:24.08:0,24,305	0/0:29,0:12:17.04:0,17,220	0/0:34,0:23:32.14:0,32,609	0/0:8,0:8:21.05:0,21,244	0/0:13,0:13:27.02:0,27,320	0/0:10,0:10:18.06:0,18,226	1/1:4,16:18:45.15:750,45,0	0/0:12,0:11:23.94:0,24,282	1/1:3,12:15:36.12:602,36,0	1/1:3,12:14:33.11:550,33,0	0/0:11,0:9:18.06:0,18,229	0/0:6,0:6:11.99:0,12,152	0/0:11,0:10:24.08:0,24,305	0/0:10,0:10:17.92:0,18,229	0/0:7,0:5:12.04:0,12,153	0/0:9,0:9:26.92:0,27,316	0/0:6,0:5:12:0,12,134	0/0:18,0:17:39.08:0,39,468	0/0:8,0:8:21.04:0,21,232	0/0:20,0:19:17.99:0,18,468	0/0:11,0:10:14.79:0,15,184	0/0:12,0:12:23.99:0,24,279	0/0:26,0:26:50.04:0,50,594	0/0:12,0:12:21.05:0,21,251	0/0:15,0:14:36.08:0,36,431	0/0:10,0:9:21.04:0,21,254	0/0:7,0:7:21.05:0,21,251
chr10	68506637	.	T	TCC	4975.42	PASS	AB=0.571;AC=41;AF=0.732;AN=56;BaseQRankSum=-1.662;DP=381;FS=11.847;HRun=9;HaplotypeScore=61.8655;InbreedingCoeff=0.8651;MQ=85.39;MQ0=0;MQRankSum=-5.823;QD=19.36;ReadPosRankSum=-0.027;VQSLOD=2.0354;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:78.14:0,78,820	1/1:0,4:5:9.03:138,9,0	0/0:25,0:27:61.70:0,62,579	0/0:13,0:12:20.17:0,20,198	0/0:12,0:12:32.45:0,32,327	1/1:3,15:19:32.55:444,33,0	1/1:1,9:12:23.56:314,24,0	0/1:4,0:16:2.94:48,0,3	1/1:5,0:6:8.52:99,9,0	1/1:7,3:10:15.04:210,15,0	1/1:12,4:17:37.54:393,38,0	1/1:3,7:10:9.03:139,9,0	0/0:9,0:9:27.07:0,27,287	1/1:3,4:10:14.02:156,14,0	1/1:6,9:15:15.52:232,16,0	1/1:3,4:7:15.01:204,15,0	1/1:7,15:23:32.33:436,32,0	1/1:2,0:9:17.47:60,17,0	1/1:4,12:17:29.54:374,30,0	1/1:2,8:12:25.81:260,26,0	1/1:3,6:9:6.02:92,6,0	1/1:3,10:14:26.58:378,27,0	0/0:12,0:12:30.07:0,30,318	0/0:18,0:18:39.09:0,39,415	1/1:1,9:13:25.75:306,26,0	1/1:3,9:13:23.52:288,24,0	1/1:4,7:11:9.03:138,9,0	1/1:3,6:9:18.06:265,18,0
chr10	68506728	.	GT	G	591.34	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.265;DP=408;FS=6.848;HRun=5;HaplotypeScore=51.2686;InbreedingCoeff=0.9444;MQ=66.36;MQ0=0;MQRankSum=-1.662;QD=28.16;ReadPosRankSum=-0.790;VQSLOD=3.1657;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:66.20:0,66,884	0/0:3,0:3:9.03:0,9,123	0/0:26,0:20:44.21:0,44,574	0/0:31,0:24:46.96:0,47,731	0/0:7,0:7:21.07:0,21,287	0/0:8,0:8:24.07:0,24,312	0/0:16,0:16:42.10:0,42,552	0/0:19,0:19:51.17:0,51,698	0/0:17,0:17:48.08:0,48,597	1/1:0,14:14:42.12:476,42,0	1/1:0,7:7:21.06:236,21,0	0/0:11,0:11:33.11:0,33,446	0/0:15,0:15:42.14:0,42,573	0/0:12,0:12:33.08:0,33,419	0/0:20,0:20:57.18:0,57,764	0/0:8,0:8:24.04:0,24,307	0/0:21,0:21:53.25:0,53,757	0/0:13,0:13:39.13:0,39,532	0/0:11,0:11:27.05:0,27,336	0/0:4,0:4:12.04:0,12,164	0/0:22,0:22:63.20:0,63,840	0/0:10,0:10:30.10:0,30,410	0/0:6,0:6:18.02:0,18,225	0/0:27,0:27:81.26:0,81,1090	0/0:12,0:12:36.12:0,36,492	0/0:12,0:12:33.10:0,33,426	0/0:23,0:21:60.20:0,60,820	0/0:9,0:9:27.06:0,27,349
chr10	68507266	.	CTT	C	1040.58	PASS	AB=0.889;AC=5;AF=0.089;AN=56;BaseQRankSum=6.528;DP=510;FS=0.611;HRun=13;HaplotypeScore=66.6005;InbreedingCoeff=0.7862;MQ=61.86;MQ0=3;MQRankSum=-0.006;QD=20.01;ReadPosRankSum=1.741;VQSLOD=3.0959;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:35:96.26:0,96,1291	0/0:8,0:8:17.69:0,18,206	0/0:16,0:10:10.57:0,11,137	0/0:13,0:10:9.37:0,9,72	0/0:21,0:21:46.92:0,47,583	0/0:22,0:22:48.15:0,48,675	0/0:22,0:22:48.07:0,48,612	0/0:10,0:25:48.15:0,48,456	0/0:17,0:17:42.12:0,42,575	1/1:1,22:23:40.28:608,40,0	1/1:2,19:21:57.08:553,57,0	0/0:12,0:12:30.08:0,30,398	0/0:14,0:14:39.11:0,39,530	0/0:14,0:14:33.08:0,33,440	0/0:16,0:17:45.11:0,45,584	0/0:13,0:14:38.62:0,39,530	0/0:25,0:29:68.49:0,68,888	0/0:5,0:22:30.19:0,30,106	0/0:22,0:21:47.63:0,48,623	0/0:16,0:16:44.57:0,45,574	0/1:7,1:8:5.04:5,0,261	0/0:11,0:14:35.04:0,35,412	0/0:14,0:15:29.49:0,29,302	0/0:15,0:15:36.10:0,36,484	0/0:15,0:15:42.11:0,42,556	0/0:23,0:23:51.14:0,51,686	0/0:22,0:23:57.14:0,57,738	0/0:12,0:12:33.10:0,33,455
chr10	68507480	.	ATGTGTGTGTGTGTGTGTGTGTGTGTG	A	3785.84	PASS	AB=0.962;AC=5;AF=0.089;AN=56;BaseQRankSum=6.292;DP=577;FS=0.825;HRun=0;HaplotypeScore=323.5991;InbreedingCoeff=0.6746;MQ=55.90;MQ0=10;MQRankSum=-5.512;QD=55.67;ReadPosRankSum=2.569;VQSLOD=1.6801;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:54:99:0,111,10922	0/0:11,0:11:12.04:0,12,826	0/0:18,0:12:9.03:0,9,275	0/0:29,0:19:21.07:0,21,842	0/0:15,0:20:42.14:0,42,4370	0/0:17,0:17:23.75:0,24,1059	0/0:21,0:22:27.09:0,27,2626	0/0:19,0:16:33.11:0,33,2220	0/0:17,0:16:19.08:0,19,1192	1/1:8,15:25:42.14:2208,42,0	1/1:5,13:18:21.07:1433,21,0	0/0:20,0:21:24.08:0,24,2059	0/0:18,0:21:48.64:0,49,4387	0/0:22,0:21:35.76:0,36,1762	0/0:18,0:18:16.87:0,17,1215	0/0:13,0:13:18.53:0,19,1421	0/0:22,0:22:30.99:0,31,1857	0/0:6,0:10:14.87:0,15,1183	0/0:23,0:21:30.09:0,30,1849	0/0:14,0:13:18.06:0,18,1274	0/0:32,0:32:18.06:0,18,872	0/0:10,0:10:3.01:0,3,331	0/0:25,0:24:54.17:0,54,4896	0/0:22,0:22:48.16:0,48,4864	0/0:20,0:20:20.87:0,21,1462	0/1:24,1:23:99:145,0,4582	0/0:14,0:14:33.05:0,33,2755	0/0:13,0:13:39.13:0,39,4006
chr10	68507519	.	T	TGTGTGTGC	6083.14	PASS	AB=0.828;AC=32;AF=0.593;AN=54;BaseQRankSum=-4.011;DP=532;FS=6.256;HRun=0;HaplotypeScore=157.5921;InbreedingCoeff=0.6663;MQ=68.99;MQ0=10;MQRankSum=-4.309;QD=20.48;ReadPosRankSum=-3.158;VQSLOD=3.4224;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,113,1672	1/1:8,0:8:15.02:338,15,0	0/0:31,0:19:42.52:0,43,504	0/0:31,0:16:41.62:0,42,371	0/0:15,0:15:39:0,39,750	1/1:5,1:17:8.93:176,9,0	1/1:21,0:22:26.97:392,27,0	0/1:22,0:20:99:105,0,267	1/1:7,1:14:12.40:341,12,0	0/0:19,0:19:56.77:0,57,837	0/0:16,0:16:26.98:0,27,489	1/1:10,11:24:12.04:406,12,0	0/0:17,0:17:39.03:0,39,701	1/1:7,2:15:8.94:279,9,0	1/1:3,6:13:8.95:286,9,0	1/1:3,8:16:12.04:470,12,0	1/1:2,17:20:6.02:268,6,0	0/1:9,0:9:68.79:286,0,69	1/1:2,7:12:32.80:493,33,0	1/1:2,12:20:9.03:342,9,0	./.	0/1:6,5:11:0:0,0,0	0/0:13,0:13:33.08:0,33,633	0/0:20,0:20:51.07:0,51,872	1/1:7,10:22:5.85:266,6,0	0/1:8,10:18:17.20:815,0,17	1/1:3,11:16:17.80:504,18,0	1/1:13,0:13:23.90:317,24,0
chr10	68507806	.	T	TGTCTTTTATG	3094.50	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-4.424;DP=576;FS=0.725;HRun=0;HaplotypeScore=162.3155;InbreedingCoeff=0.9904;MQ=78.67;MQ0=0;MQRankSum=-4.733;QD=103.15;ReadPosRankSum=-3.409;VQSLOD=3.0026;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:87.17:0,87,2251	0/0:6,0:6:18.02:0,18,365	0/0:15,0:14:30.09:0,30,786	0/0:16,0:16:39.07:0,39,885	0/0:19,0:19:44.61:0,45,1454	0/0:22,0:22:60.19:0,60,1870	0/0:13,0:13:36.09:0,36,976	1/1:9,16:30:84.25:3189,84,0	0/0:24,0:24:69.12:0,69,1849	0/0:32,0:32:93.29:0,93,2603	0/0:26,0:26:57.12:0,57,1508	0/0:10,0:10:30.09:0,30,877	0/0:24,0:24:66.14:0,66,1795	0/0:17,0:17:48.14:0,48,1410	0/0:22,0:22:57.15:0,57,1530	0/0:16,0:16:39.13:0,39,1207	0/0:25,0:25:72.21:0,72,2019	0/0:17,0:17:48.14:0,48,1480	0/0:18,0:18:48.09:0,48,1248	0/0:28,0:28:75.24:0,75,2258	0/0:40,0:40:99:0,111,3394	0/0:15,0:15:42.13:0,42,1269	0/0:21,0:21:54.11:0,54,1424	0/0:28,0:27:75.24:0,75,2173	0/0:16,0:16:42.12:0,42,1170	0/0:21,0:21:63.13:0,63,1630	0/0:14,0:13:42.09:0,42,1161	0/0:11,0:11:33.08:0,33,857
chr10	68508364	.	C	CAG	1478.79	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=3.598;DP=524;FS=35.021;HRun=0;HaplotypeScore=61.9364;InbreedingCoeff=0.9984;MQ=83.51;MQ0=0;MQRankSum=-1.553;QD=47.70;ReadPosRankSum=-0.328;VQSLOD=1.8113;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:55.07:0,55,829	0/0:11,0:11:27.09:0,27,413	0/0:19,0:19:57.19:0,57,860	0/0:12,0:12:30.07:0,30,425	0/0:26,0:26:78.26:0,78,1186	0/0:19,0:19:57.19:0,57,873	0/0:23,0:23:69.23:0,69,1057	0/0:15,0:15:42.13:0,42,622	0/0:12,0:12:33.11:0,33,505	1/1:0,16:16:48.16:927,48,0	1/1:2,13:15:36.12:674,36,0	0/0:14,0:14:42.14:0,42,643	0/0:17,0:17:51.17:0,51,781	0/0:16,0:16:45.15:0,45,689	0/0:20,0:20:60.20:0,60,919	0/0:13,0:13:39.11:0,39,574	0/0:22,0:22:63.21:0,63,964	0/0:20,0:20:60.20:0,60,918	0/0:15,0:15:45.15:0,45,682	0/0:27,0:27:75.21:0,75,1123	0/0:23,0:23:69.23:0,69,1049	0/0:19,0:19:57.19:0,57,872	0/0:28,0:28:81.27:0,81,1236	0/0:24,0:24:72.24:0,72,1103	0/0:25,0:25:75.23:0,75,1122	0/0:25,0:25:72.24:0,72,1103	0/0:19,0:19:57.19:0,57,871	0/0:9,0:9:27.09:0,27,414
chr10	68509999	.	T	TA	4744.12	PASS	AB=0.909;AC=35;AF=0.625;AN=56;BaseQRankSum=-10.900;DP=377;FS=0.000;HRun=11;HaplotypeScore=44.0350;InbreedingCoeff=0.8014;MQ=70.89;MQ0=0;MQRankSum=2.372;QD=20.81;ReadPosRankSum=0.562;VQSLOD=5.4244;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:41.13:0,41,299	1/1:1,4:5:9.02:91,9,0	0/0:9,0:7:4.89:0,5,29	0/0:10,0:7:2.94:0,3,23	0/0:24,0:24:56.74:0,57,439	1/1:0,16:16:42.08:426,42,0	1/1:1,10:11:30.06:305,30,0	0/0:25,0:25:51.90:0,52,390	0/1:9,1:10:6.58:7,0,134	0/0:1,0:16:28.51:0,29,82	0/0:3,0:16:26.73:0,27,76	1/1:2,8:10:24.05:244,24,0	0/0:15,0:15:35.85:0,36,279	1/1:1,4:6:15.03:152,15,0	1/1:1,10:12:26.89:258,27,0	1/1:3,6:9:0.81:188,1,0	1/1:4,27:31:69.14:700,69,0	1/1:1,26:28:68.97:684,69,0	1/1:5,9:14:6.80:243,7,0	1/1:2,9:11:27.05:274,27,0	1/1:0,5:5:6.01:61,6,0	1/1:0,3:3:9.02:91,9,0	0/0:8,0:8:20.92:0,21,163	0/0:6,0:6:14.92:0,15,116	1/1:5,11:16:24.05:243,24,0	1/1:3,10:14:26.22:299,26,0	1/1:6,10:16:9.83:281,10,0	1/1:3,7:11:20.88:197,21,0
chr10	68510116	.	GA	G	266.88	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=5.759;DP=442;FS=9.699;HRun=8;HaplotypeScore=59.8589;InbreedingCoeff=0.7124;MQ=60.12;MQ0=11;MQRankSum=-5.614;QD=4.68;ReadPosRankSum=0.632;VQSLOD=-0.0445;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:87.24:0,87,1023	0/0:7,0:7:6.02:0,6,73	0/1:38,0:10:17.03:17,0,145	0/0:29,0:7:10.32:0,10,108	0/0:28,0:28:51.16:0,51,613	0/0:15,0:14:27.07:0,27,316	0/0:11,0:11:27.08:0,27,326	0/0:26,0:26:60.03:0,60,687	0/0:11,0:11:27.08:0,27,326	1/1:3,5:8:15.02:145,15,0	1/1:2,9:11:24.04:231,24,0	0/0:11,0:11:24.04:0,24,258	0/0:13,0:13:33.08:0,33,375	0/0:7,0:7:18.05:0,18,207	0/0:10,0:10:24.07:0,24,289	0/0:11,0:11:27.08:0,27,319	0/0:23,1:24:31.20:0,31,639	0/0:18,0:18:39.04:0,39,427	0/0:14,0:14:33.04:0,33,369	0/0:13,0:13:30.04:0,30,335	0/0:10,0:10:15.05:0,15,181	0/0:9,0:9:24.07:0,24,289	0/0:9,0:9:21.06:0,21,254	0/0:11,0:11:24.06:0,24,277	0/0:13,0:13:30.07:0,30,342	0/0:21,0:21:42.09:0,42,491	0/0:16,0:16:36.11:0,36,434	0/0:11,0:12:27.07:0,27,314
chr10	68510130	.	GGAAAAAA	G	896.92	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=5.695;DP=447;FS=3.274;HRun=0;HaplotypeScore=101.3828;InbreedingCoeff=0.7804;MQ=63.13;MQ0=8;MQRankSum=-5.442;QD=18.69;ReadPosRankSum=1.338;VQSLOD=3.0459;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:38:99:0,105,3097	0/0:2,0:2:6.01:0,6,144	0/0:39,0:13:30.32:0,30,535	0/0:25,0:7:10.52:0,11,188	0/0:22,0:22:57.61:0,58,1491	0/0:14,0:14:39.10:0,39,1075	0/0:13,0:13:36.11:0,36,1360	0/0:27,0:27:74.57:0,75,1724	0/0:12,0:12:33.10:0,33,1135	1/1:2,9:11:26.88:540,27,0	1/1:1,9:10:17.13:475,17,0	0/0:11,0:11:28.34:0,28,934	0/0:13,0:13:36.12:0,36,1181	0/0:8,0:8:24.03:0,24,759	0/0:9,0:9:27.07:0,27,798	0/0:13,0:13:36.11:0,36,1090	0/0:23,0:23:66.68:0,67,2321	0/0:17,0:17:29.08:0,29,1153	0/0:21,0:21:63.16:0,63,1676	0/0:12,0:12:35.99:0,36,976	0/0:11,0:11:30.10:0,30,957	0/0:9,0:9:27.09:0,27,923	0/0:9,0:9:21.06:0,21,617	0/0:16,0:16:32.90:0,33,855	0/0:10,0:10:24.52:0,25,587	0/1:27,0:27:2.87:3,0,2143	0/0:11,0:11:33.07:0,33,935	0/0:13,0:13:27.08:0,27,894
chr10	68510524	.	C	CTTGTTTTTGTT	5043.78	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=0.563;DP=690;FS=5.022;HRun=0;HaplotypeScore=211.1831;InbreedingCoeff=0.7772;MQ=80.10;MQ0=0;MQRankSum=-9.175;QD=64.66;ReadPosRankSum=-1.013;VQSLOD=4.2279;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:64,0:64:99:0,172,5458	0/0:9,0:9:27.09:0,27,884	0/0:22,0:22:57.18:0,57,1684	0/0:21,0:21:42.12:0,42,1200	0/0:28,0:28:69.24:0,69,2325	0/0:22,0:22:54.19:0,54,1762	0/0:33,0:33:84.27:0,84,2705	0/0:29,0:29:69.24:0,69,2237	0/0:27,0:27:69.22:0,69,2252	1/1:16,14:30:69.24:3268,69,0	1/1:11,5:18:42.14:1681,42,0	0/0:21,0:21:57.20:0,57,1732	0/0:21,0:21:60.21:0,60,1997	0/0:22,0:22:60.21:0,60,1982	0/0:15,0:15:42.14:0,42,1402	0/0:17,0:17:45.15:0,45,1467	0/0:35,0:35:90.31:0,90,2890	0/0:24,0:24:66.23:0,66,2171	0/0:22,0:22:48.14:0,48,1489	0/0:18,0:18:48.15:0,48,1542	0/0:36,0:36:93.26:0,93,2866	0/0:22,0:22:60.21:0,60,1968	0/0:24,0:24:66.21:0,66,2038	0/0:26,0:26:66.23:0,66,2226	0/0:15,0:15:39.13:0,39,1316	0/1:30,0:30:94.80:95,0,2135	0/0:30,0:30:90.31:0,90,2877	0/0:9,0:9:18.06:0,18,607
chr10	68510643	.	GACAAAAGGGGTGA	G	2760.77	PASS	AB=0.969;AC=5;AF=0.089;AN=56;BaseQRankSum=8.715;DP=576;FS=1.579;HRun=0;HaplotypeScore=210.5380;InbreedingCoeff=0.7433;MQ=72.94;MQ0=0;MQRankSum=-8.257;QD=40.01;ReadPosRankSum=-0.032;VQSLOD=3.4176;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,120,7059	0/0:8,0:8:21.07:0,21,1356	0/0:26,0:25:71.98:0,72,3620	0/0:26,0:26:66.22:0,66,3046	0/0:23,0:23:66.22:0,66,3603	0/0:20,0:20:57.19:0,57,3566	0/0:21,0:21:51.17:0,51,3062	0/0:28,0:28:81.28:0,81,5097	0/0:22,0:22:60.21:0,60,3631	1/1:8,16:24:54.18:2087,54,0	1/1:2,12:14:27.09:771,27,0	0/0:11,0:11:33.10:0,33,1885	0/0:13,0:13:39.13:0,39,2340	0/0:20,0:20:60.21:0,60,3923	0/0:9,0:9:27.09:0,27,1652	0/0:13,0:13:36.12:0,36,2269	0/0:30,0:30:90.31:0,90,5595	0/0:13,0:13:33.11:0,33,1924	0/0:21,0:21:63.22:0,63,3627	0/0:30,0:30:90.31:0,90,5638	0/0:29,0:29:87.30:0,87,5410	0/0:19,0:19:51.18:0,51,3120	0/0:16,0:16:48.16:0,48,3028	0/0:24,0:24:66.23:0,66,3729	0/0:18,0:18:54.19:0,54,3378	0/1:30,1:31:32.48:32,0,5305	0/0:23,0:23:66.23:0,66,4181	0/0:2,0:2:6.02:0,6,247
chr10	68511490	.	GCAC	G	578.67	PASS	AB=0.933;AC=5;AF=0.093;AN=54;BaseQRankSum=5.223;DP=328;FS=4.499;HRun=0;HaplotypeScore=50.2616;InbreedingCoeff=0.4971;MQ=71.01;MQ0=0;MQRankSum=-1.870;QD=14.11;ReadPosRankSum=-1.619;VQSLOD=2.4644;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:54.18:0,54,1019	0/0:3,0:3:9.03:0,9,158	0/0:16,0:10:6.20:0,6,241	0/0:21,0:18:12.08:0,12,322	0/0:5,0:5:12.04:0,12,244	0/0:12,0:12:27.09:0,27,517	0/0:10,0:10:18.06:0,18,330	0/0:22,0:21:27.09:0,27,469	0/0:15,0:15:36.12:0,36,684	1/1:15,6:21:42.14:599,42,0	1/1:4,2:6:6.02:82,6,0	0/0:7,0:7:18.06:0,18,361	0/0:7,0:7:15.05:0,15,289	0/0:10,0:10:24.08:0,24,487	0/0:9,0:9:15.05:0,15,305	0/0:7,0:7:21.06:0,21,381	0/0:30,2:32:29.31:0,29,1280	0/0:17,0:17:42.14:0,42,832	0/0:4,0:4:5.89:0,6,76	0/0:5,0:5:6.02:0,6,122	0/0:22,0:21:39.61:0,40,767	./.	0/0:8,0:8:6.01:0,6,86	0/0:11,0:11:0.74:0,1,341	0/0:5,0:5:12.04:0,12,219	0/1:13,1:14:15.89:16,0,440	0/0:9,0:9:27.09:0,27,546	0/0:6,0:6:15.05:0,15,288
chr10	68511554	.	A	AT	900.63	PASS	AB=0.833;AC=7;AF=0.130;AN=54;BaseQRankSum=-4.857;DP=274;FS=5.890;HRun=7;HaplotypeScore=29.5998;InbreedingCoeff=0.4797;MQ=66.23;MQ0=3;MQRankSum=-1.076;QD=13.05;ReadPosRankSum=-0.902;VQSLOD=1.3496;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:60.07:0,60,569	0/0:4,0:4:12.02:0,12,116	0/0:9,0:4:6.01:0,6,58	0/0:11,0:6:10.20:0,10,67	0/0:9,0:9:27.03:0,27,255	0/0:14,0:14:39.06:0,39,376	0/0:9,0:9:27.04:0,27,259	1/1:5,18:15:39.12:470,39,0	0/0:9,0:9:24.02:0,24,227	0/1:3,6:9:4.88:230,0,5	1/1:1,9:10:27:307,27,0	0/0:3,0:3:6.01:0,6,58	0/0:3,0:3:9.01:0,9,87	./.	0/0:7,0:7:17.51:0,18,173	0/0:4,0:4:9.01:0,9,87	0/0:28,0:28:75.08:0,75,714	0/0:14,0:14:39:0,39,360	0/0:14,0:13:26.47:0,26,276	0/0:5,0:5:15.01:0,15,139	0/1:9,0:9:0.51:1,0,127	0/0:2,0:2:6.01:0,6,58	0/0:2,0:2:6.01:0,6,58	0/0:6,0:6:15.01:0,15,140	0/0:6,0:6:18.03:0,18,174	0/1:16,2:18:27.40:27,0,327	0/0:13,0:12:24.03:0,24,231	0/0:10,0:10:30.05:0,30,290
chr10	68512365	.	C	CACA	21085.43	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=-14.128;DP=564;FS=5.070;HRun=0;HaplotypeScore=69.6293;InbreedingCoeff=0.9986;MQ=77.36;MQ0=0;MQRankSum=-2.171;QD=50.81;ReadPosRankSum=4.283;VQSLOD=6.8587;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:99:0,99,1538	1/1:1,14:15:36.12:802,36,0	0/0:20,0:20:53.96:0,54,749	0/0:13,0:13:33.04:0,33,485	0/0:19,0:19:54.18:0,54,880	1/1:2,11:13:27.09:603,27,0	1/1:2,20:23:48.16:1070,48,0	1/1:1,20:21:60.15:1214,60,0	1/1:0,26:26:60.07:1337,60,0	1/1:3,21:24:57.13:1164,57,0	1/1:0,12:12:27.09:603,27,0	1/1:4,15:19:33.08:691,33,0	0/0:21,0:21:60.14:0,60,900	1/1:4,15:19:33.11:724,33,0	1/1:0,18:19:51.18:1139,51,0	1/1:0,8:9:21.07:468,21,0	1/1:1,24:25:54.19:1205,54,0	1/1:1,21:23:57.20:1270,57,0	1/1:1,15:16:39.10:756,39,0	1/1:1,10:11:30.10:668,30,0	1/1:4,32:37:84.29:1836,84,0	1/1:0,26:26:54.19:1200,54,0	0/0:13,0:13:36.11:0,36,563	0/0:30,0:30:81.28:0,81,1322	1/1:1,15:16:36.12:804,36,0	1/1:1,24:25:69.16:1391,69,0	1/1:0,17:17:45.15:1004,45,0	1/1:0,19:19:51.18:1138,51,0
chr10	68514847	.	T	TC	18775.44	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=-4.001;DP=661;FS=5.130;HRun=2;HaplotypeScore=71.8670;InbreedingCoeff=0.9983;MQ=76.56;MQ0=0;MQRankSum=-4.224;QD=38.63;ReadPosRankSum=2.049;VQSLOD=5.6029;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,132,1636	1/1:1,9:10:27.09:389,27,0	0/0:13,0:13:36.11:0,36,446	0/0:20,0:20:56.76:0,57,670	0/0:21,0:21:63.19:0,63,768	1/1:0,16:16:45.15:648,45,0	1/1:0,34:34:99:1425,99,0	1/1:5,22:27:66.17:866,66,0	1/1:1,21:22:45.15:648,45,0	1/1:2,19:21:57.19:817,57,0	1/1:1,14:15:33.11:475,33,0	1/1:0,22:22:63.21:907,63,0	0/0:17,0:17:48.15:0,48,595	1/1:1,23:24:57.19:821,57,0	1/1:0,28:28:75.25:1080,75,0	1/1:0,19:19:54.18:778,54,0	1/1:0,33:33:99:1425,99,0	1/1:2,36:38:99:1487,105,0	1/1:0,12:13:39.10:535,39,0	1/1:0,21:21:60.16:840,60,0	1/1:1,41:42:99:1637,114,0	1/1:0,23:23:66.22:950,66,0	0/0:17,0:17:51.16:0,51,631	0/0:38,0:38:99:0,108,1320	1/1:1,20:21:54.18:778,54,0	1/1:0,24:24:72.22:1018,72,0	1/1:0,24:23:69.23:992,69,0	1/1:0,9:9:18.06:259,18,0
chr10	68516396	.	GGT	G	6379.43	PASS	AB=0.871;AC=36;AF=0.667;AN=54;BaseQRankSum=3.132;DP=805;FS=10.405;HRun=0;HaplotypeScore=121.6233;InbreedingCoeff=0.5671;MQ=65.62;MQ0=8;MQRankSum=4.371;QD=11.56;ReadPosRankSum=4.412;VQSLOD=3.8001;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:89.36:0,89,1194	1/1:3,7:12:20.55:177,21,0	0/0:31,0:20:3:0,3,26	./.	0/0:20,4:23:3.72:0,4,419	1/1:15,7:22:30.08:332,30,0	1/1:11,13:27:20.68:197,21,0	0/0:39,0:36:19.04:0,19,195	1/1:16,13:29:62.91:650,63,0	0/0:42,0:41:53.41:0,53,330	0/0:18,0:17:4.35:0,4,27	1/1:18,9:28:13.48:204,13,0	0/1:22,0:23:16.07:16,0,583	1/1:10,20:31:47.95:517,48,0	1/1:15,10:25:44.96:487,45,0	1/1:7,12:21:32.76:332,33,0	1/1:10,10:19:15.89:320,16,0	0/0:9,0:22:18.01:0,18,177	1/1:16,4:18:10.95:104,11,0	1/1:6,12:21:29.58:277,30,0	0/1:36,30:66:19.22:422,0,19	1/1:8,17:25:15.02:169,15,0	0/1:20,1:22:40.25:40,0,561	0/1:28,4:32:50.24:50,0,562	1/1:15,6:22:38.19:360,38,0	1/1:17,27:44:89.48:910,89,0	1/1:13,14:30:31.78:283,32,0	1/1:11,12:25:50.94:533,51,0
chr10	68516503	.	ATGTATGTG	A	2209.49	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=11.444;DP=998;FS=11.455;HRun=0;HaplotypeScore=242.5621;InbreedingCoeff=0.6324;MQ=56.24;MQ0=18;MQRankSum=-5.041;QD=22.09;ReadPosRankSum=-0.619;VQSLOD=1.6787;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:84.29:0,84,2913	0/0:13,0:13:33.11:0,33,1128	0/0:34,0:16:24.08:0,24,461	0/0:53,0:25:41.05:0,41,663	0/0:42,0:42:99:0,114,4080	0/0:44,0:43:99:0,114,3657	0/0:21,0:21:48.16:0,48,1599	1/1:26,23:40:66.23:1246,66,0	0/0:41,0:41:99:0,114,3961	0/1:51,0:50:99:1069,0,204	0/0:30,0:30:11.96:0,12,108	0/0:52,0:52:99:0,138,5085	0/0:27,0:27:78.27:0,78,2951	0/0:30,0:30:78.27:0,78,2904	0/0:35,0:35:93.30:0,93,3509	0/0:26,0:26:72.23:0,72,2391	0/0:24,0:24:57.09:0,57,1815	0/0:18,0:18:48.11:0,48,1292	0/0:29,0:26:54.18:0,54,1557	0/0:41,0:41:99:0,120,4569	0/0:63,0:61:99:0,132,4938	0/0:44,0:44:99:0,123,4434	0/0:31,0:31:90.30:0,90,3020	0/0:35,0:35:64.45:0,64,2129	0/0:32,0:34:84.29:0,84,2990	0/0:44,0:44:99:0,114,3700	0/0:36,0:36:99:0,99,3525	0/0:12,0:12:33.11:0,33,1316
chr10	68516507	.	ATGTGTGTATG	A	2479.61	PASS	AC=4;AF=0.074;AN=54;BaseQRankSum=11.046;DP=1018;FS=4.188;HRun=0;HaplotypeScore=275.3757;InbreedingCoeff=0.9619;MQ=56.02;MQ0=22;MQRankSum=-3.142;QD=26.38;ReadPosRankSum=-1.010;VQSLOD=2.8125;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:87.18:0,87,3347	0/0:13,0:13:33.09:0,33,1347	0/0:37,0:16:24.04:0,24,424	0/0:60,0:29:38.18:0,38,669	0/0:42,0:42:99:0,108,4478	0/0:46,0:45:99:0,114,4345	0/0:22,0:22:51.08:0,51,1482	1/1:44,0:35:8.95:121,9,0	0/0:44,0:44:99:0,107,4587	1/1:8,42:50:17.21:2470,17,0	./.	0/0:53,0:53:99:0,135,5517	0/0:27,0:27:78.17:0,78,3101	0/0:28,0:28:75.21:0,75,3087	0/0:37,0:36:90.29:0,90,3754	0/0:26,0:26:69.16:0,69,2576	0/0:23,0:23:51.15:0,51,1958	0/0:17,0:17:42.10:0,42,1404	0/0:29,0:25:54.08:0,54,1642	0/0:44,0:44:99:0,123,5061	0/0:65,0:63:99:0,153,6099	0/0:46,0:46:99:0,123,5087	0/0:32,0:32:90.16:0,90,3216	0/0:37,0:37:66.18:0,66,2429	0/0:32,0:32:78.27:0,78,3066	0/0:43,0:43:84.33:0,84,4069	0/0:37,0:37:96.27:0,96,3785	0/0:11,0:11:33.09:0,33,1457
chr10	68516619	.	ATG	A	11364.97	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=16.030;DP=1046;FS=5.711;HRun=0;HaplotypeScore=129.7423;InbreedingCoeff=0.9939;MQ=57.46;MQ0=13;MQRankSum=4.414;QD=19.80;ReadPosRankSum=8.163;VQSLOD=4.2095;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:82.97:0,83,1805	1/1:4,14:18:24.07:300,24,0	0/0:53,0:23:11.51:0,12,680	0/0:53,0:32:62.19:0,62,880	0/0:34,0:34:81.24:0,81,1249	1/1:7,32:40:37.62:755,38,0	1/1:5,18:23:21.06:262,21,0	0/0:57,0:56:76.77:0,77,1615	1/1:2,35:36:48.15:599,48,0	0/0:48,0:47:99:0,123,1916	0/0:37,0:37:53.29:0,53,1306	1/1:10,31:41:51.16:637,51,0	0/0:35,0:35:87.15:0,87,1283	1/1:7,17:24:45.13:561,45,0	1/1:5,50:55:99:1236,99,0	1/1:7,28:35:57.18:712,57,0	1/1:6,23:27:31.08:442,31,0	0/0:21,0:21:52.02:0,52,797	1/1:7,9:13:30.03:329,30,0	1/1:5,25:30:54.17:674,54,0	1/1:11,50:59:84.04:1049,84,0	1/1:2,28:29:42.02:524,42,0	0/0:35,0:35:77.27:0,77,1390	0/0:47,1:48:30.62:0,31,1462	1/1:5,21:26:39.12:487,39,0	1/1:8,42:50:99:1447,103,0	1/1:7,34:41:72.23:899,72,0	1/1:1,16:17:36.11:450,36,0
chr10	68517587	.	T	TAATAAATA	3148.25	PASS	AB=1.000;AC=33;AF=0.688;AN=48;BaseQRankSum=-1.248;DP=267;FS=4.187;HRun=0;HaplotypeScore=46.9329;InbreedingCoeff=0.5790;MQ=39.60;MQ0=30;MQRankSum=-5.679;QD=21.42;ReadPosRankSum=0.255;VQSLOD=1.8286;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:13:33.11:0,33,801	1/1:3,0:3:3.01:124,3,0	./.	0/1:2,0:1:0:0,0,0	0/0:15,0:13:21.07:0,21,535	1/1:5,6:11:15.05:563,15,0	./.	0/0:41,0:35:38.65:0,39,1377	1/1:4,2:3:6.02:248,6,0	1/1:11,0:13:11.98:98,12,0	1/1:12,0:10:5.99:49,6,0	1/1:5,0:4:3.01:111,3,0	0/0:3,0:2:3.01:0,3,76	1/1:3,1:2:3.01:124,3,0	1/1:3,2:4:3.01:124,3,0	1/1:0,1:2:3.01:124,3,0	1/1:20,0:11:3.01:124,3,0	0/0:11,0:9:6.02:0,6,112	1/1:8,1:4:6.02:157,6,0	1/1:4,0:4:3.01:93,3,0	./.	./.	0/0:6,0:6:9.02:0,9,178	0/0:8,0:8:21.07:0,21,513	1/1:4,6:8:15.05:619,15,0	1/1:7,2:6:3.01:124,3,0	1/1:7,1:8:3.01:124,3,0	1/1:8,3:9:15.05:499,15,0
chr10	68518780	.	A	AT	14828.32	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=-13.956;DP=524;FS=16.781;HRun=2;HaplotypeScore=46.4864;InbreedingCoeff=0.9967;MQ=88.13;MQ0=0;MQRankSum=-4.960;QD=39.54;ReadPosRankSum=1.033;VQSLOD=3.0550;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,120,1473	1/1:0,6:6:18.06:259,18,0	0/0:18,0:18:51.15:0,51,608	0/0:19,0:19:48.61:0,49,575	0/0:21,0:21:60.19:0,60,744	1/1:0,19:19:57.16:799,57,0	1/1:1,16:17:48.16:691,48,0	1/1:1,20:21:60.20:863,60,0	1/1:0,8:8:21.07:302,21,0	1/1:2,27:29:81.24:1119,81,0	1/1:1,9:10:27.01:362,27,0	1/1:1,18:19:51.17:734,51,0	0/0:12,0:12:33.09:0,33,394	1/1:1,10:11:30.10:431,30,0	1/1:0,18:18:54.18:778,54,0	1/1:1,13:14:36.12:519,36,0	1/1:0,29:29:75.25:1080,75,0	1/1:0,18:18:45.15:648,45,0	1/1:0,20:20:60.20:861,60,0	1/1:0,19:19:50.98:734,51,0	1/1:3,12:15:42.13:583,42,0	1/1:1,12:13:39.04:524,39,0	0/0:20,0:20:57.18:0,57,707	0/0:17,0:17:48.13:0,48,581	1/1:2,19:21:48.16:691,48,0	1/1:0,36:36:99:1554,108,0	1/1:1,24:25:69.23:993,69,0	1/1:0,7:7:21.07:302,21,0
chr10	68519361	.	G	GC	1378.85	PASS	AB=0.619;AC=27;AF=0.482;AN=56;BaseQRankSum=7.275;DP=357;FS=20.278;HRun=6;HaplotypeScore=54.3757;InbreedingCoeff=0.4421;MQ=87.89;MQ0=0;MQRankSum=-4.638;QD=7.75;ReadPosRankSum=1.690;VQSLOD=-0.0278;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:45.08:0,45,451	1/1:2,1:3:3.01:37,3,0	0/0:19,0:16:22.51:0,23,220	0/0:27,0:23:31.52:0,32,272	0/0:12,0:12:33.08:0,33,337	0/1:5,9:14:21.02:94,0,21	0/1:6,9:15:34.23:92,0,34	0/0:16,0:16:26.11:0,26,327	0/1:4,4:8:9.93:30,0,10	0/0:17,0:17:45.09:0,45,453	0/0:10,0:10:24.05:0,24,241	1/1:3,1:9:2.31:11,2,0	0/0:19,0:19:51.11:0,51,520	1/1:3,7:10:5.25:48,5,0	1/1:3,8:11:6.02:73,6,0	0/1:5,7:12:18.23:61,0,18	1/1:7,17:24:7.40:434,7,0	1/1:3,2:14:14.50:114,14,0	1/1:2,9:11:21.54:215,22,0	1/1:5,0:5:1.03:3,1,0	1/1:7,16:23:18.04:206,18,0	0/0:1,0:1:2.97:0,3,20	0/0:11,0:11:24.05:0,24,244	0/0:20,0:20:57.13:0,57,581	0/0:2,4:6:2.86:0,3,15	0/1:2,7:9:12.45:84,0,12	1/1:3,6:9:5.76:40,6,0	1/1:1,0:1:2.98:22,3,0
chr10	68519486	.	T	TG	4686.48	PASS	AB=0.724;AC=26;AF=0.464;AN=56;BaseQRankSum=2.057;DP=415;FS=51.345;HRun=0;HaplotypeScore=90.1676;InbreedingCoeff=0.3248;MQ=64.45;MQ0=4;MQRankSum=-5.758;QD=22.64;ReadPosRankSum=-1.550;VQSLOD=1.4099;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:42:99:0,114,1553	1/1:1,1:2:6.02:87,6,0	0/0:19,0:13:36.45:0,36,385	0/0:18,0:13:19.67:0,20,249	0/0:17,0:17:48.15:0,48,654	0/1:6,12:17:17.75:457,0,18	0/1:8,4:12:49.80:116,0,50	0/0:19,0:19:54.18:0,54,755	1/1:3,3:6:5.10:130,5,0	0/0:17,0:17:48.15:0,48,642	0/0:18,0:18:38.27:0,38,605	1/1:5,9:14:15.16:309,15,0	0/0:17,0:17:48.16:0,48,670	0/1:5,5:10:0.69:208,0,1	0/1:3,7:9:10.50:287,0,11	1/1:4,8:11:27.02:382,27,0	1/1:6,11:17:4.27:482,4,0	0/1:13,1:13:31.27:31,0,33	1/1:5,16:19:32.39:701,32,0	0/1:8,4:12:18.39:211,0,18	1/1:1,11:12:23.95:307,24,0	0/1:2,3:5:11.31:120,0,11	0/0:15,0:15:45.14:0,45,613	0/0:25,0:24:72.24:0,72,1006	0/1:5,7:12:1.48:376,0,1	0/1:5,4:9:2.98:182,0,3	1/1:6,7:11:6.91:290,7,0	0/1:8,0:8:9.10:9,0,65
chr10	68519490	.	G	GT	930.31	PASS	AB=0.985;AC=25;AF=0.446;AN=56;BaseQRankSum=10.685;DP=446;FS=6.091;HRun=8;HaplotypeScore=140.9488;InbreedingCoeff=0.2042;MQ=59.67;MQ0=8;MQRankSum=-9.875;QD=3.81;ReadPosRankSum=-2.947;VQSLOD=-0.3619;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:41,2:42:52.68:0,53,971	1/1:2,0:2:4.19:20,4,0	0/1:18,0:12:18.60:19,0,93	0/0:20,0:12:10.31:0,10,102	0/0:17,0:17:42:0,42,377	1/1:21,0:20:15.67:196,16,0	0/1:15,0:15:16.82:17,0,28	0/0:20,0:20:48:0,48,429	0/1:7,0:7:9.44:21,0,9	0/0:15,0:15:39.02:0,39,357	0/0:18,0:18:20.99:0,21,312	0/1:12,1:13:25.95:48,0,26	0/0:17,0:17:48:0,48,433	0/1:12,0:12:2.56:35,0,3	0/1:11,0:10:4.95:60,0,5	1/1:14,0:13:12.36:75,12,0	0/1:18,0:19:60.50:61,0,60	1/1:15,0:14:16.88:112,17,0	0/1:20,1:19:41.35:41,0,54	1/1:14,0:14:2.74:74,3,0	0/0:10,0:10:1.54:0,2,6	0/1:6,0:6:1.03:31,0,1	0/0:16,0:15:42.02:0,42,384	0/0:26,0:25:64.78:0,65,569	1/1:17,0:17:4.65:90,5,0	0/1:12,0:12:0.39:100,0,0	0/1:17,0:15:17.59:73,0,18	1/1:9,0:9:2.92:32,3,0
chr10	68519492	.	T	TG	806.30	PASS	AB=0.877;AC=15;AF=0.268;AN=56;BaseQRankSum=6.015;DP=450;FS=15.144;HRun=0;HaplotypeScore=141.3952;InbreedingCoeff=-0.2900;MQ=58.97;MQ0=10;MQRankSum=-8.973;QD=4.03;ReadPosRankSum=1.004;VQSLOD=2.1621;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:42:99:0,100,1591	0/1:2,0:2:0.18:2,0,0	0/0:19,0:12:32.41:0,32,320	0/0:21,0:12:17.06:0,17,245	0/0:16,0:16:45.13:0,45,610	0/1:17,4:20:99:247,0,149	0/1:13,2:15:2.76:3,0,133	0/0:21,0:21:54.16:0,54,723	0/1:5,2:7:15.57:16,0,66	0/0:15,0:15:45.14:0,45,600	0/0:18,0:18:45.60:0,46,587	0/1:10,1:12:68.95:69,0,130	0/0:18,0:18:48.16:0,48,667	0/0:11,1:12:15.12:0,15,106	0/1:11,0:10:67.55:83,0,68	0/1:12,1:12:27.63:109,0,28	0/1:17,2:19:64.35:64,0,264	0/0:15,0:14:9.04:0,9,46	0/1:18,1:15:9.79:10,0,221	0/1:14,2:16:54.91:55,0,94	0/0:10,0:10:20.72:0,21,143	0/1:4,2:6:19.15:70,0,19	0/0:16,0:15:42.14:0,42,584	0/0:26,0:25:74.58:0,75,965	0/1:15,2:17:65.96:66,0,155	0/1:11,2:13:65.78:66,0,88	0/1:13,4:15:56.36:56,0,119	0/1:9,3:11:43.04:43,0,49
chr10	68519497	.	TTG	T	731.94	PASS	AB=0.969;AC=16;AF=0.286;AN=56;BaseQRankSum=6.136;DP=442;FS=3.808;HRun=0;HaplotypeScore=112.8625;InbreedingCoeff=-0.2367;MQ=49.35;MQ0=10;MQRankSum=-10.081;QD=3.47;ReadPosRankSum=-4.179;VQSLOD=1.2489;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:43:99:0,126,1937	0/0:2,0:2:3.07:0,3,11	0/0:16,0:9:9.43:0,9,221	0/0:17,0:8:17.78:0,18,202	0/0:16,0:16:44.90:0,45,650	0/1:23,0:22:99:111,0,162	0/1:15,0:15:34.27:34,0,41	0/0:21,0:21:60.02:0,60,818	0/1:9,0:9:28.75:29,0,35	0/0:14,0:14:42.11:0,42,593	0/0:17,0:17:37.63:0,38,588	0/1:11,1:12:54.35:54,0,172	0/0:19,0:19:54.06:0,54,760	0/1:12,2:14:79.99:80,0,103	0/1:12,0:11:1.95:2,0,108	0/1:12,0:11:26.73:27,0,47	0/1:17,1:18:4.71:5,0,145	0/1:14,1:13:30.52:166,0,31	0/1:16,1:13:13.48:13,0,153	0/1:14,1:15:67.40:83,0,67	0/0:7,0:7:2.16:0,2,43	0/1:6,0:6:42.54:50,0,43	0/0:17,0:16:47.98:0,48,720	0/0:25,0:24:38.68:0,39,964	0/0:16,0:16:9.26:0,9,157	0/1:13,0:13:62.57:63,0,108	0/1:17,0:16:58.57:61,0,59	1/1:12,1:12:12.78:111,13,0
chr10	68519499	.	G	GTTGTTTTTTT	10128.18	PASS	AB=0.961;AC=33;AF=0.589;AN=56;BaseQRankSum=11.936;DP=448;FS=42.000;HRun=0;HaplotypeScore=197.0571;InbreedingCoeff=0.7581;MQ=48.51;MQ0=10;MQRankSum=-14.074;QD=41.17;ReadPosRankSum=-3.750;VQSLOD=2.5716;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:44:99:0,132,3633	1/1:1,0:2:5.93:160,6,0	0/0:16,0:9:23.75:0,24,359	0/0:17,0:8:15.52:0,16,414	0/0:15,0:15:39.10:0,39,1075	1/1:16,4:21:50.60:1743,51,0	0/1:14,1:15:0.96:291,0,1	0/0:20,0:20:57:0,57,1390	1/1:8,0:8:14.91:253,15,0	0/0:14,0:14:36.10:0,36,955	0/0:15,0:15:5.46:0,5,1025	1/1:12,1:13:26.92:598,27,0	0/0:20,0:20:54.12:0,54,1416	1/1:15,0:15:28.08:411,28,0	1/1:8,4:11:29.79:1076,30,0	1/1:8,5:12:26.95:995,27,0	1/1:14,2:17:31.23:592,31,0	0/1:15,0:13:30.35:205,0,30	0/1:16,1:13:29.61:629,0,30	1/1:16,1:17:36.70:697,37,0	1/1:6,0:6:6.44:98,6,0	1/1:8,1:9:17.89:392,18,0	0/0:17,0:16:47.97:0,48,1346	0/0:23,0:22:63.18:0,63,1878	1/1:15,1:16:33.43:671,33,0	1/1:18,0:18:28.89:571,29,0	1/1:16,0:17:33.82:570,34,0	1/1:13,0:12:17.80:174,18,0
chr10	68519518	.	ACCGAACCCAGGGC	A	6080.13	PASS	AB=0.711;AC=16;AF=0.286;AN=56;BaseQRankSum=9.070;DP=405;FS=66.619;HRun=0;HaplotypeScore=151.9666;InbreedingCoeff=-0.2920;MQ=45.68;MQ0=11;MQRankSum=-8.113;QD=31.50;ReadPosRankSum=0.944;VQSLOD=2.1194;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:44:99:0,129,8119	1/1:1,2:3:3.01:123,3,0	0/0:7,0:3:6.02:0,6,197	0/0:11,0:4:9:0,9,184	0/0:15,0:15:39.13:0,39,2499	0/1:16,3:17:99:322,0,2253	0/0:14,1:14:21.07:0,21,1246	0/0:20,0:20:60.21:0,60,3247	0/1:3,5:8:99:236,0,191	0/0:12,0:12:30.10:0,30,1818	0/0:15,0:15:35.80:0,36,2265	0/1:5,2:7:99:230,0,473	0/0:18,0:18:54.17:0,54,3264	0/1:7,8:15:99:346,0,774	0/1:5,4:8:99:111,0,564	0/1:12,3:13:99:221,0,990	0/1:8,5:13:99:346,0,750	0/1:7,3:7:99:350,0,447	0/0:12,0:9:15.01:0,15,773	0/1:8,10:18:99:787,0,832	0/0:4,0:4:6.02:0,6,344	0/1:5,5:10:99:449,0,969	0/0:17,0:16:48.16:0,48,3071	0/0:21,0:20:60.20:0,60,3712	0/1:8,10:17:99:584,0,479	0/1:8,12:20:99:1051,0,957	0/1:8,7:14:99:584,0,574	0/1:9,4:12:99:341,0,1144
chr10	68519750	.	C	CTT	8747.50	PASS	AB=1.000;AC=41;AF=0.732;AN=56;BaseQRankSum=-6.092;DP=569;FS=1.763;HRun=11;HaplotypeScore=72.6044;InbreedingCoeff=0.8458;MQ=69.86;MQ0=2;MQRankSum=-2.990;QD=21.76;ReadPosRankSum=-1.328;VQSLOD=4.1639;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:47:94.12:0,94,924	1/1:1,5:6:18.03:238,18,0	0/1:15,0:17:18.33:18,0,149	0/0:13,0:12:5.97:0,6,39	0/0:23,0:24:41.89:0,42,544	1/1:0,7:10:14.54:182,15,0	1/1:4,22:34:62.18:849,62,0	1/1:10,15:27:47.07:560,47,0	1/1:2,10:15:24.08:342,24,0	1/1:5,1:23:44.41:383,44,0	1/1:2,1:16:26.98:257,27,0	1/1:1,9:10:14.82:217,15,0	0/0:23,0:23:57.01:0,57,543	1/1:1,18:22:34.55:383,35,0	1/1:0,22:23:56.63:767,57,0	1/1:3,12:18:46.61:574,47,0	1/1:5,28:41:84.72:1085,85,0	0/0:3,0:22:52.06:0,52,224	1/1:11,6:18:27.71:309,28,0	1/1:1,5:8:8.99:96,9,0	1/1:6,20:28:53.14:693,53,0	1/1:1,8:10:11.52:113,12,0	0/0:15,0:15:36.02:0,36,346	0/0:22,0:23:44.85:0,45,486	1/1:5,11:16:4.98:392,5,0	1/1:3,14:20:39.05:465,39,0	1/1:6,18:25:21.56:616,22,0	1/1:3,8:12:18.41:208,18,0
chr10	68520025	.	TCTTTC	T	228.69	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=2.518;DP=369;FS=0.564;HRun=0;HaplotypeScore=90.0777;InbreedingCoeff=-0.1341;MQ=64.44;MQ0=17;MQRankSum=-0.851;QD=1.27;ReadPosRankSum=3.100;VQSLOD=1.5487;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:20:17.16:0,17,756	1/1:4,0:4:4.21:11,4,0	0/0:30,0:11:26.59:0,27,296	0/0:17,0:6:14.13:0,14,122	0/0:12,6:18:29.83:0,30,404	0/1:14,0:14:4.35:6,0,4	0/1:11,0:11:38.83:39,0,48	0/0:23,0:22:66.06:0,66,879	0/1:15,0:13:25.82:34,0,26	0/0:5,0:5:13.29:0,13,191	0/0:14,0:13:32.92:0,33,396	0/1:13,0:12:26.21:26,0,35	0/0:10,0:10:30.04:0,30,527	0/1:11,0:10:6.17:6,0,48	0/1:12,0:12:16.16:22,0,16	0/1:11,0:11:9.80:33,0,10	0/1:25,0:24:41.79:42,0,48	0/0:17,0:16:23.44:0,23,112	0/0:11,0:10:4.86:0,5,37	1/1:3,0:2:2.13:4,2,0	0/1:11,0:11:3.31:3,0,37	0/1:16,0:16:24.31:24,0,27	0/0:10,0:9:20.38:0,20,265	0/0:10,0:10:17.91:0,18,258	0/1:10,0:9:33.84:50,0,34	0/1:15,0:15:12.70:54,0,13	0/1:9,0:8:14.33:25,0,14	0/0:2,0:1:3:0,3,26
chr10	68520026	.	CTTTCTTTTTTTTTTTTT	C	3714.09	PASS	AB=1.000;AC=33;AF=0.589;AN=56;BaseQRankSum=2.118;DP=372;FS=1.603;HRun=0;HaplotypeScore=151.3604;InbreedingCoeff=0.3024;MQ=61.12;MQ0=18;MQRankSum=0.769;QD=15.16;ReadPosRankSum=4.600;VQSLOD=2.5022;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:27:78.13:0,78,3025	1/1:4,0:4:9.39:92,9,0	0/0:29,0:10:0.69:0,1,210	0/0:16,0:5:7.55:0,8,166	0/0:17,0:16:30.04:0,30,575	1/1:12,1:14:38.33:506,38,0	1/1:10,1:11:24.73:287,25,0	0/1:22,0:21:63.33:63,0,185	1/1:14,0:13:1.16:197,1,0	0/1:5,0:5:14.29:112,0,14	0/1:14,0:13:75.45:75,0,103	0/1:13,0:12:36.39:181,0,36	0/0:11,0:11:30.04:0,30,1249	0/1:11,0:10:4:105,0,4	1/1:11,0:11:4.05:155,4,0	1/1:0,11:11:3.01:139,3,0	1/1:25,0:24:9.54:289,10,0	0/1:13,0:15:40.74:115,0,41	0/1:11,0:10:55.31:131,0,55	1/1:4,0:3:5.94:45,6,0	1/1:10,0:10:18.53:149,19,0	1/1:15,1:16:35.02:360,35,0	0/0:11,0:11:27.06:0,27,874	0/0:11,0:11:21.32:0,21,878	1/1:9,1:9:20.95:283,21,0	1/1:14,0:14:38.69:341,39,0	1/1:8,0:7:1.58:90,2,0	0/0:2,0:1:2.94:0,3,18
chr10	68520065	.	CT	C	742.58	PASS	AC=8;AF=0.154;AN=52;BaseQRankSum=-0.248;DP=426;FS=0.000;HRun=8;HaplotypeScore=56.5337;InbreedingCoeff=0.8429;MQ=29.21;MQ0=83;MQRankSum=-2.058;QD=11.25;ReadPosRankSum=0.605;VQSLOD=1.9853;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:36:64.12:0,64,751	0/0:12,0:8:9.03:0,9,107	./.	./.	0/0:16,0:14:17.97:0,18,198	0/0:12,0:10:15.01:0,15,166	0/0:20,0:15:21.06:0,21,249	1/1:9,11:12:30.05:289,30,0	0/0:17,0:13:5.98:0,6,55	1/1:1,12:10:24.04:231,24,0	1/1:2,14:10:15.02:145,15,0	0/0:15,0:13:20.99:0,21,230	0/0:9,0:7:10.58:0,11,113	0/0:9,0:7:9.02:0,9,102	0/0:20,0:18:20.98:0,21,221	0/0:15,0:14:15.01:0,15,166	0/0:24,0:14:33.10:0,33,395	1/1:7,10:14:23.68:231,24,0	0/0:15,0:10:23.94:0,24,267	0/0:17,0:14:18.01:0,18,201	0/0:10,0:8:6.02:0,6,72	0/0:18,0:17:18.01:0,18,201	0/0:13,0:13:18.51:0,19,207	0/0:17,0:12:18.41:0,18,185	0/0:13,0:10:12.04:0,12,141	0/0:10,0:8:11.99:0,12,124	0/0:15,0:12:9.91:0,10,110	0/0:19,0:6:11.93:0,12,111
chr10	68520103	.	CGCTTCCTA	C	7822.20	PASS	AB=0.826;AC=36;AF=0.643;AN=56;BaseQRankSum=11.781;DP=457;FS=6.402;HRun=0;HaplotypeScore=106.0547;InbreedingCoeff=0.7761;MQ=43.93;MQ0=17;MQRankSum=-12.294;QD=29.30;ReadPosRankSum=1.742;VQSLOD=4.2132;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:84.29:0,84,3524	1/1:5,5:8:6.02:162,6,0	0/0:16,0:10:30.10:0,30,1121	0/0:27,0:12:36.02:0,36,1319	0/0:20,0:20:60.21:0,60,2573	1/1:2,12:13:18.06:485,18,0	1/1:3,12:14:12.04:324,12,0	0/0:17,0:17:39.13:0,39,1625	1/1:1,13:14:15.05:404,15,0	0/0:21,0:18:57.20:0,57,2441	0/0:16,0:12:30.10:0,30,1181	1/1:5,14:19:24.08:647,24,0	0/1:7,0:7:62.72:63,0,627	1/1:3,12:14:27.09:728,27,0	1/1:2,20:22:30.10:764,30,0	1/1:1,14:14:24.08:647,24,0	1/1:6,15:19:21.15:514,21,0	1/1:3,4:6:6.02:162,6,0	1/1:12,4:12:12.04:324,12,0	1/1:6,12:16:15.05:378,15,0	1/1:3,6:9:5.99:136,6,0	1/1:3,11:13:18.06:485,18,0	0/0:14,0:14:42.14:0,42,1716	0/0:26,0:25:75.26:0,75,3170	1/1:1,9:10:15.05:405,15,0	1/1:2,11:12:18.06:485,18,0	1/1:3,10:13:12.04:324,12,0	0/1:7,8:11:37.35:386,0,37
chr10	68520185	.	CTCTT	C	762.39	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=3.693;DP=493;FS=3.674;HRun=0;HaplotypeScore=94.9642;InbreedingCoeff=0.9907;MQ=79.61;MQ0=0;MQRankSum=-3.504;QD=30.50;ReadPosRankSum=-0.690;VQSLOD=3.4128;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:81.28:0,81,2103	0/0:8,0:8:24.08:0,24,632	0/0:12,0:12:27.09:0,27,635	0/0:18,0:18:45.13:0,45,1048	0/0:21,0:21:60.21:0,60,1584	0/0:18,0:18:51.18:0,51,1347	0/0:19,0:19:54.19:0,54,1425	0/0:17,0:17:45.15:0,45,1110	0/0:18,0:18:39.13:0,39,1025	1/1:2,11:13:27.09:497,27,0	1/1:1,11:12:21.07:386,21,0	0/0:21,0:21:48.16:0,48,1260	0/0:12,0:12:30.10:0,30,792	0/0:9,0:9:21.07:0,21,533	0/0:20,0:20:54.19:0,54,1388	0/0:29,0:29:75.26:0,75,1897	0/0:36,0:36:99:0,99,2600	0/0:11,0:11:33.11:0,33,860	0/0:19,0:19:45.15:0,45,1145	0/0:14,0:14:42.14:0,42,1086	0/0:30,0:30:78.27:0,78,2037	0/0:12,0:12:33.11:0,33,872	0/0:12,0:12:30.10:0,30,757	0/0:33,0:33:96.33:0,96,2524	0/0:15,0:15:42.14:0,42,1102	0/0:16,0:16:42.14:0,42,1057	0/0:13,0:13:39.13:0,39,1029	0/0:7,0:7:21.07:0,21,554
chr10	68521100	.	CAT	C	1185.64	PASS	AB=0.667;AC=24;AF=0.462;AN=52;BaseQRankSum=10.252;DP=573;FS=2.758;HRun=0;HaplotypeScore=132.8437;InbreedingCoeff=0.6386;MQ=56.01;MQ0=7;MQRankSum=-3.255;QD=9.56;ReadPosRankSum=-4.701;VQSLOD=2.6124;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:39,1:40:47.72:0,48,1031	1/1:3,1:4:2.82:24,3,0	0/0:44,0:21:62.55:0,63,1025	0/0:31,0:15:33.10:0,33,508	0/0:32,0:32:93.29:0,93,1713	1/1:4,3:7:12.71:146,13,0	./.	0/0:47,0:47:99:0,132,2401	1/1:12,0:12:5.75:41,6,0	0/0:66,0:66:99:0,199,3704	0/0:38,0:38:99:0,111,2107	1/1:3,3:6:5.82:63,6,0	0/0:42,0:42:99:0,126,2340	1/1:5,1:6:8.96:71,9,0	1/1:13,1:14:9.01:97,9,0	1/1:0,19:19:17.51:248,18,0	1/1:3,3:6:5.83:82,6,0	0/0:22,0:22:30.91:0,31,904	0/1:2,1:3:13.03:13,0,13	0/1:1,9:10:0.13:0,0,0	0/0:6,4:10:1.37:0,1,4	./.	0/0:30,0:30:90.31:0,90,1727	0/0:34,0:34:83.72:0,84,1558	1/1:8,2:10:18.04:224,18,0	0/1:1,9:10:36.70:166,0,37	0/1:11,2:13:3.13:109,0,3	1/1:3,1:4:8.98:86,9,0
chr10	68521102	.	TAC	T	327.89	PASS	AB=1.000;AC=21;AF=0.404;AN=52;BaseQRankSum=8.597;DP=561;FS=0.742;HRun=0;HaplotypeScore=132.0787;InbreedingCoeff=0.5756;MQ=55.16;MQ0=7;MQRankSum=-5.207;QD=3.35;ReadPosRankSum=-1.214;VQSLOD=2.7177;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:48.15:0,48,1041	0/0:4,0:4:0:0,0,0	0/0:44,0:23:64.11:0,64,982	0/0:29,0:14:32.90:0,33,366	0/0:33,0:33:96.31:0,96,1757	1/1:7,0:7:8.64:61,9,0	./.	0/0:46,0:46:99:0,138,2410	1/1:11,0:11:1.65:5,2,0	0/0:67,0:67:99:0,202,3581	0/0:38,0:38:99:0,111,2034	1/1:5,0:5:2.78:22,3,0	0/0:43,0:43:99:0,126,2294	1/1:4,0:4:0.43:1,0,0	1/1:11,0:11:5.04:29,5,0	1/1:19,0:19:17.38:140,17,0	1/1:4,0:4:5.79:48,6,0	0/0:20,1:22:46.70:0,47,891	0/1:3,0:3:0:1,0,0	0/0:9,0:9:0:0,0,0	0/0:8,2:10:1.82:0,2,5	./.	0/0:32,0:32:96.27:0,96,1740	0/0:33,1:34:83.69:0,84,1518	1/1:8,0:8:13.90:90,14,0	0/1:10,0:10:30.85:52,0,31	0/1:12,0:12:15.98:16,0,16	1/1:4,0:4:2.95:23,3,0
chr10	68521108	.	TAC	T	468.72	PASS	AB=0.818;AC=21;AF=0.420;AN=50;BaseQRankSum=8.063;DP=540;FS=0.000;HRun=0;HaplotypeScore=124.7171;InbreedingCoeff=0.7112;MQ=55.90;MQ0=7;MQRankSum=-5.671;QD=5.39;ReadPosRankSum=-3.300;VQSLOD=2.3749;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,1:37:51.21:0,51,1026	0/0:2,1:3:0:0,0,0	0/0:42,0:22:59.73:0,60,850	0/0:30,0:11:13.60:0,14,223	0/0:36,0:36:99:0,105,1894	1/1:2,3:5:5.82:59,6,0	./.	0/0:47,0:47:99:0,138,2431	1/1:11,0:11:3:25,3,0	0/0:65,0:65:99:0,196,3444	0/0:36,0:36:99:0,105,1916	1/1:1,3:4:2.83:29,3,0	0/0:42,0:42:99:0,120,2073	0/0:1,1:2:0:0,0,0	1/1:11,0:11:5.85:57,6,0	1/1:8,8:16:17.48:174,17,0	1/1:3,1:4:5.82:56,6,0	0/0:23,0:23:44.75:0,45,748	./.	0/0:6,2:8:0:0,0,0	0/1:7,2:9:0.01:0,0,1	./.	0/0:35,0:35:99:0,102,1732	0/0:32,0:32:77.70:0,78,1416	1/1:4,2:6:8.80:86,9,0	1/1:4,3:7:9.01:88,9,0	1/1:11,1:12:4.23:29,4,0	1/1:2,0:2:3.01:31,3,0
chr10	68521120	.	C	CA	146.47	PASS	AB=0.653;AC=17;AF=0.386;AN=44;BaseQRankSum=5.600;DP=455;FS=4.414;HRun=1;HaplotypeScore=104.9632;InbreedingCoeff=0.6475;MQ=61.13;MQ0=4;MQRankSum=-4.424;QD=4.18;ReadPosRankSum=-2.876;VQSLOD=-0.6375;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:67.94:0,68,861	0/1:0,1:1:0:0,0,0	0/0:31,0:18:7.75:0,8,437	0/0:29,0:10:11.85:0,12,134	0/0:37,0:37:99:0,108,1388	1/1:0,3:3:2.94:18,3,0	./.	0/0:46,0:46:99:0,129,1648	./.	0/0:67,0:66:99:0,199,2558	0/0:35,0:35:99:0,99,1271	1/1:1,2:3:2.92:18,3,0	0/0:43,0:43:99:0,123,1571	0/1:0,1:1:0:0,0,0	./.	1/1:2,7:9:3:29,3,0	1/1:3,0:3:5.91:50,6,0	0/0:18,0:18:43.31:0,43,615	./.	0/1:1,2:3:0:0,0,0	0/1:6,0:6:0.10:0,0,0	./.	0/0:35,0:35:99:0,99,1269	0/0:35,0:35:83.90:0,84,1056	./.	1/1:0,3:3:9.03:117,9,0	0/1:1,1:2:0.01:0,0,0	1/1:1,0:1:3.01:44,3,0
chr10	68521121	.	ACATATAT	A	166.02	PASS	AB=0.938;AC=16;AF=0.364;AN=44;BaseQRankSum=5.819;DP=450;FS=6.116;HRun=0;HaplotypeScore=155.1322;InbreedingCoeff=0.6372;MQ=61.20;MQ0=4;MQRankSum=-3.675;QD=5.03;ReadPosRankSum=-3.437;VQSLOD=1.4464;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,1:38:65.40:0,65,2755	0/1:1,0:1:0:0,0,0	0/0:29,0:17:9.92:0,10,994	0/0:30,0:10:14.88:0,15,390	0/0:37,0:37:99:0,108,4302	1/1:3,0:3:2.94:18,3,0	./.	0/0:45,0:45:99:0,135,5150	./.	0/0:67,0:66:99:0,202,7809	0/0:35,0:35:99:0,102,3897	1/1:2,1:3:2.92:18,3,0	0/0:41,0:41:99:0,123,4707	0/1:1,0:1:0:0,0,0	./.	1/1:8,1:9:3.01:53,3,0	1/1:2,1:3:5.93:85,6,0	0/0:19,0:19:8.74:0,9,1911	./.	0/1:3,0:3:0:0,0,0	0/1:4,2:6:0.02:0,0,0	./.	0/0:35,0:35:99:0,102,4015	0/0:34,0:34:83.29:0,83,3170	./.	1/1:3,0:3:9.01:97,9,0	0/0:2,0:2:2.92:0,3,29	1/1:1,0:1:3:26,3,0
chr10	68521172	.	T	TACACAC	277.80	PASS	AB=0.970;AC=18;AF=0.360;AN=50;BaseQRankSum=6.002;DP=479;FS=10.627;HRun=0;HaplotypeScore=167.8756;InbreedingCoeff=0.5484;MQ=55.38;MQ0=1;MQRankSum=-5.627;QD=3.75;ReadPosRankSum=-4.197;VQSLOD=0.2948;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,2:37:56.32:0,56,1668	./.	0/0:27,0:19:51.05:0,51,1007	0/0:25,0:10:20.78:0,21,340	0/0:33,0:33:96.23:0,96,2264	0/1:2,0:2:0:0,0,0	1/1:1,0:1:3.01:34,3,0	0/0:51,0:51:99:0,150,3143	0/0:6,0:7:0.82:0,1,2	0/0:68,0:67:99:0,196,4379	0/0:33,0:33:84.19:0,84,1913	1/1:5,0:5:2:17,2,0	0/0:40,0:40:99:0,117,2697	0/1:4,0:4:0:0,0,0	0/1:5,1:6:0:0,0,0	0/1:7,0:7:0:0,0,0	1/1:3,0:5:2.67:19,3,0	0/1:24,1:25:46.18:46,0,1388	1/1:1,0:1:3.01:37,3,0	0/1:4,0:4:0:0,0,0	0/0:3,0:4:0:0,0,0	0/0:8,0:8:0:0,0,0	0/0:35,0:35:99:0,102,2386	0/0:34,0:34:84.18:0,84,1976	./.	1/1:8,0:8:14.33:126,14,0	1/1:5,1:6:5.91:130,6,0	./.
chr10	68521187	.	A	ACACC	1879.10	PASS	AB=0.523;AC=30;AF=0.536;AN=56;BaseQRankSum=11.461;DP=582;FS=18.873;HRun=0;HaplotypeScore=158.8133;InbreedingCoeff=0.7277;MQ=55.97;MQ0=0;MQRankSum=-8.365;QD=12.70;ReadPosRankSum=-9.490;VQSLOD=-0.4103;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:32,1:33:62.50:0,62,1056	1/1:2,0:2:5.96:45,6,0	0/0:30,0:19:47.02:0,47,789	0/0:23,0:10:20.55:0,21,322	0/0:37,0:37:99:0,105,2084	1/1:0,5:5:8.45:56,8,0	1/1:1,6:7:5.84:34,6,0	0/0:47,0:47:99:0,138,2589	1/1:2,12:14:23.27:202,23,0	0/0:68,0:68:99:0,202,3963	0/0:36,0:36:90.26:0,90,1761	1/1:0,12:13:4.64:37,5,0	0/0:45,0:45:99:0,132,2651	1/1:4,4:9:8.53:67,9,0	1/1:1,7:10:8.46:55,8,0	1/1:0,17:17:11.04:76,11,0	1/1:2,6:8:17.73:227,18,0	0/0:27,0:27:32.39:0,32,1360	1/1:3,1:4:9.02:165,9,0	0/0:0,6:6:0:0,0,1	1/1:4,3:8:11.89:109,12,0	0/1:0,13:15:0.01:0,0,2	0/0:41,0:41:99:0,117,2401	0/0:39,0:40:95.74:0,96,1945	1/1:0,7:7:11.77:72,12,0	0/1:3,14:18:20.49:837,0,20	1/1:1,7:9:1.86:15,2,0	1/1:0,0:2:3.01:82,3,0
chr10	68521330	.	T	TATAC	20299.53	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=-18.589;DP=913;FS=9.282;HRun=0;HaplotypeScore=143.5513;InbreedingCoeff=0.9511;MQ=59.32;MQ0=4;MQRankSum=1.001;QD=37.66;ReadPosRankSum=5.781;VQSLOD=4.4527;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:51.17:0,51,860	1/1:4,11:15:21.07:524,21,0	0/0:21,0:8:12.04:0,12,180	0/0:31,0:9:0.34:0,0,67	0/0:34,0:34:66.21:0,66,1086	1/1:6,19:24:42.14:1030,42,0	1/1:3,12:15:11.69:299,12,0	0/0:53,0:53:99:0,135,2081	1/1:6,29:38:30.10:749,30,0	0/0:61,0:61:99:0,150,2442	0/0:26,0:26:72.22:0,72,1165	1/1:5,25:31:44.99:1124,45,0	0/0:32,0:32:81.26:0,81,1321	1/1:6,31:38:51.16:1274,51,0	1/1:9,35:44:72.08:1798,72,0	1/1:10,29:40:39.11:974,39,0	1/1:6,12:18:15.05:375,15,0	0/0:23,0:23:44.98:0,45,700	1/1:5,10:14:24.06:517,24,0	1/1:4,41:45:84.12:2098,84,0	1/1:10,41:53:87.30:2173,87,0	1/1:7,29:36:63.22:1573,63,0	0/0:30,0:30:84.20:0,84,1285	0/0:27,0:27:60.19:0,60,982	1/1:4,18:23:27.09:674,27,0	1/1:6,43:51:99:2795,129,0	1/1:5,24:30:48.16:1198,48,0	1/1:1,21:22:45.14:1124,45,0
chr10	68521512	.	T	TACACAC	2339.38	PASS	AB=0.640;AC=5;AF=0.089;AN=56;BaseQRankSum=-1.146;DP=760;FS=28.027;HRun=0;HaplotypeScore=209.6651;InbreedingCoeff=0.7464;MQ=56.18;MQ0=7;MQRankSum=-2.143;QD=21.27;ReadPosRankSum=-6.375;VQSLOD=1.0573;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:56.80:0,57,1077	0/0:7,0:7:18.04:0,18,370	0/0:23,0:7:17.99:0,18,260	0/0:31,0:17:42.06:0,42,652	0/0:33,0:33:96.29:0,96,2056	0/0:29,0:29:78.21:0,78,1412	0/0:17,0:17:48.11:0,48,1001	1/1:37,0:37:43.30:534,43,0	0/0:32,0:32:90.11:0,90,1890	1/1:11,20:40:74.67:1303,75,0	0/1:14,14:32:26.50:632,0,26	0/0:33,0:32:93.20:0,93,1810	0/0:19,0:18:46.08:0,46,875	0/0:24,0:23:63.14:0,63,1234	0/0:28,0:28:84.23:0,84,1691	0/0:26,0:26:78.22:0,78,1604	0/0:41,0:41:71.38:0,71,2055	0/0:11,0:11:6.98:0,7,367	0/0:12,0:12:36.04:0,36,634	0/0:26,0:25:69.17:0,69,1244	0/0:31,0:31:81.23:0,81,1584	0/0:23,0:23:53.95:0,54,1021	0/0:28,0:27:75.07:0,75,1440	0/0:25,0:25:63.14:0,63,1168	0/0:21,0:21:60.17:0,60,1223	0/0:40,0:40:99:0,102,1949	0/0:36,0:36:99:0,108,2169	0/0:27,0:27:78.27:0,78,1748
chr10	68522008	.	TTCCAGAGG	T	9395.05	PASS	AB=0.611;AC=33;AF=0.589;AN=56;BaseQRankSum=12.650;DP=523;FS=7.780;HRun=0;HaplotypeScore=116.4414;InbreedingCoeff=0.8807;MQ=46.52;MQ0=91;MQRankSum=-12.300;QD=41.57;ReadPosRankSum=-0.280;VQSLOD=4.1959;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,105,4227	1/1:3,11:14:26.88:680,27,0	0/0:22,0:7:11.28:0,11,620	0/0:27,0:3:6.02:0,6,93	0/0:13,0:13:24.07:0,24,894	1/1:2,10:11:24.08:641,24,0	1/1:3,7:9:15.05:400,15,0	0/0:77,0:16:45.15:0,45,1671	1/1:4,8:12:12.04:320,12,0	0/0:21,0:20:57.20:0,57,2267	0/0:15,0:15:42.13:0,42,1592	1/1:2,15:17:36.05:843,36,0	0/0:10,0:10:27.08:0,27,951	1/1:1,9:10:18.06:480,18,0	1/1:3,15:18:30.07:742,30,0	1/1:1,7:8:18.06:480,18,0	0/1:4,7:11:5.87:305,0,6	0/0:33,0:32:48.85:0,49,1617	1/1:13,6:12:18.06:406,18,0	1/1:2,11:12:24.04:580,24,0	1/1:6,11:16:21.07:517,21,0	1/1:2,10:12:12:260,12,0	0/0:12,0:11:33.11:0,33,1409	0/0:25,0:24:63.16:0,63,2372	1/1:3,14:17:33.11:881,33,0	1/1:3,13:16:39.10:898,39,0	1/1:2,11:13:33.11:881,33,0	1/1:0,7:3:3.01:80,3,0
chr10	68522153	.	AAGAGAGAGAGAGAGAGAG	A	7200.91	PASS	AB=0.841;AC=28;AF=0.636;AN=44;BaseQRankSum=7.598;DP=360;FS=0.815;HRun=0;HaplotypeScore=161.0289;InbreedingCoeff=0.6902;MQ=37.62;MQ0=17;MQRankSum=-4.127;QD=34.96;ReadPosRankSum=0.538;VQSLOD=4.1773;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:28:12.04:0,12,496	1/1:5,0:4:3.01:39,3,0	./.	./.	0/0:12,0:16:6.49:0,6,220	1/1:6,6:12:19.62:861,20,0	1/1:7,3:9:6.02:292,6,0	0/1:15,0:12:0:1,0,0	1/1:11,8:20:15.05:710,15,0	0/0:20,0:21:45.15:0,45,2910	./.	1/1:3,6:10:11.76:524,12,0	0/0:6,0:8:15.04:0,15,815	./.	1/1:8,6:14:9.03:439,9,0	1/1:7,4:11:7.38:296,7,0	1/1:12,4:13:6.02:292,6,0	0/0:25,0:20:31.66:0,32,1954	./.	1/1:8,7:15:24.01:748,24,0	./.	1/1:8,3:11:8.92:438,9,0	0/0:8,0:7:9.03:0,9,285	0/0:7,0:9:9.03:0,9,590	1/1:5,8:13:15.52:732,16,0	0/1:8,7:15:99:514,0,205	1/1:13,10:22:18.06:877,18,0	1/1:9,4:12:9.03:438,9,0
chr10	68522510	.	TGTG	T	830.47	PASS	AC=32;AF=0.696;AN=46;BaseQRankSum=0.752;DP=193;FS=1.795;HRun=0;HaplotypeScore=37.2269;InbreedingCoeff=0.6155;MQ=78.19;MQ0=0;MQRankSum=1.016;QD=29.66;ReadPosRankSum=-6.089;VQSLOD=2.0858;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,126,3055	1/1:0,1:1:3.01:51,3,0	0/0:19,0:14:42.13:0,42,784	0/0:14,0:10:24:0,24,395	0/0:25,0:25:63.20:0,63,1550	1/1:2,1:3:9.02:127,9,0	./.	1/1:2,0:2:6.02:104,6,0	1/1:0,1:1:3.01:54,3,0	1/1:0,0:2:6:52,6,0	1/1:1,0:1:3:27,3,0	./.	0/0:14,0:14:42.14:0,42,997	1/1:1,0:1:2.99:24,3,0	1/1:0,1:1:3.01:51,3,0	1/1:1,0:1:3.01:50,3,0	1/1:1,2:2:5.98:72,6,0	1/1:2,0:2:5.96:43,6,0	1/1:3,0:3:9.03:160,9,0	./.	1/1:2,0:2:3:25,3,0	1/1:1,0:1:3:27,3,0	0/0:20,0:19:54.19:0,54,1286	0/0:28,0:28:84.29:0,84,2026	1/1:1,0:1:3.01:55,3,0	1/1:2,0:2:6:73,6,0	./.	./.
chr10	68522516	.	T	TCC	116.45	PASS	AC=12;AF=0.462;AN=26;BaseQRankSum=3.462;DP=174;FS=11.218;HRun=0;HaplotypeScore=48.4040;InbreedingCoeff=0.6629;MQ=71.92;MQ0=2;MQRankSum=-0.103;QD=14.56;ReadPosRankSum=-2.953;VQSLOD=1.2558;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:47:99:0,129,2021	1/1:0,1:1:3.01:44,3,0	0/0:17,0:11:32.08:0,32,389	0/0:11,0:7:15.05:0,15,226	0/0:26,0:25:68.54:0,69,1004	1/1:0,1:1:3.01:43,3,0	./.	./.	1/1:0,1:1:3.01:48,3,0	./.	./.	./.	0/0:14,0:14:39.11:0,39,607	./.	1/1:0,1:1:3.01:45,3,0	./.	1/1:1,2:1:3.01:44,3,0	./.	1/1:1,0:1:0.47:1,0,0	./.	./.	./.	0/0:20,0:19:54.14:0,54,827	0/0:27,0:27:81.22:0,81,1263	./.	./.	./.	./.
chr10	68522595	.	GCTAAATCCCCAACCCC	G	48.85	PASS	AB=0.714;AC=3;AF=0.167;AN=18;BaseQRankSum=2.859;DP=166;FS=2.171;HRun=0;HaplotypeScore=104.8359;MQ=50.51;MQ0=19;MQRankSum=2.942;QD=6.11;ReadPosRankSum=-2.742;VQSLOD=1.7079;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:44:99:0,129,9006	./.	0/0:4,0:3:9.03:0,9,709	0/0:10,0:1:3.01:0,3,243	0/0:28,0:27:80.76:0,81,6115	./.	./.	./.	./.	0/1:3,2:3:93.75:94,0,234	./.	./.	0/0:12,0:12:30.09:0,30,2140	./.	./.	./.	./.	./.	./.	./.	./.	1/1:1,2:2:3.01:36,3,0	0/0:15,0:15:42.14:0,42,2870	0/0:20,0:19:57.20:0,57,4193	./.	./.	./.	./.
chr10	68523056	.	AAC	A	2867.98	PASS	AB=0.954;AC=30;AF=0.536;AN=56;BaseQRankSum=11.631;DP=571;FS=8.871;HRun=0;HaplotypeScore=107.6447;InbreedingCoeff=0.0653;MQ=82.53;MQ0=1;MQRankSum=-4.063;QD=6.78;ReadPosRankSum=9.950;VQSLOD=1.1848;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:87.18:0,87,1392	0/1:13,0:13:31.49:68,0,31	0/0:29,0:28:71.17:0,71,1124	0/0:24,0:23:60.44:0,60,895	0/0:17,0:17:42.12:0,42,730	1/1:19,1:20:37.78:173,38,0	0/1:21,1:22:15.89:163,0,16	0/1:22,3:25:99:158,0,184	0/1:18,2:20:55.73:145,0,56	0/1:14,1:15:25.69:85,0,26	0/1:20,1:21:19.45:155,0,19	1/1:14,5:19:8.91:232,9,0	0/0:9,0:9:27.09:0,27,515	1/1:17,2:19:2.72:134,3,0	1/1:21,2:23:14.25:238,14,0	0/1:21,0:21:99:108,0,100	1/1:22,0:21:27.72:173,28,0	0/1:13,1:14:11.71:97,0,12	0/1:24,2:26:68.78:199,0,69	1/1:19,1:20:0.31:189,0,0	0/1:15,1:16:13.52:84,0,14	1/1:17,1:18:11.41:113,11,0	0/0:11,0:11:30.08:0,30,494	0/0:29,0:29:87.27:0,87,1628	0/1:16,0:16:23.43:94,0,23	0/1:22,0:22:56.07:96,0,56	1/1:34,1:35:9.37:273,9,0	1/1:16,0:16:11.60:77,12,0
chr10	68523057	.	ACC	A	11062.17	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=1.894;DP=566;FS=1.322;HRun=9;HaplotypeScore=81.9030;InbreedingCoeff=0.9990;MQ=83.41;MQ0=1;MQRankSum=-6.353;QD=26.53;ReadPosRankSum=5.162;VQSLOD=4.8067;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:71.57:0,72,1083	1/1:1,12:13:30.09:349,30,0	0/0:29,0:28:66.12:0,66,943	0/0:25,0:24:56.12:0,56,653	0/0:16,0:16:36.11:0,36,564	1/1:1,19:20:45.13:524,45,0	1/1:3,18:21:51.15:594,51,0	1/1:11,13:25:42.08:473,42,0	1/1:5,14:19:39:454,39,0	1/1:3,11:15:35.84:396,36,0	1/1:2,18:20:51.15:594,51,0	1/1:6,13:19:36.10:411,36,0	0/0:9,0:9:27.07:0,27,396	1/1:3,16:19:48.14:557,48,0	1/1:3,20:23:60.16:695,60,0	1/1:6,15:21:39.10:454,39,0	1/1:0,22:21:54.16:629,54,0	1/1:3,11:14:30.01:349,30,0	1/1:6,20:26:63.15:718,63,0	1/1:3,16:19:51.14:584,51,0	1/1:2,13:15:36.11:419,36,0	1/1:2,15:17:42.12:489,42,0	0/0:11,0:11:24.07:0,24,371	0/0:30,0:30:84.29:0,84,1373	1/1:2,14:16:30.09:349,30,0	1/1:4,18:22:51.13:590,51,0	1/1:4,31:35:87.26:1013,87,0	1/1:1,15:16:36.10:419,36,0
chr10	68523978	.	CG	C	12028.06	PASS	AB=0.531;AC=33;AF=0.589;AN=56;BaseQRankSum=7.139;DP=578;FS=3.155;HRun=1;HaplotypeScore=64.9054;InbreedingCoeff=0.9235;MQ=89.55;MQ0=0;MQRankSum=-4.677;QD=36.78;ReadPosRankSum=5.747;VQSLOD=5.0234;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,108,1650	1/1:0,7:7:15.05:209,15,0	0/0:30,0:29:76.66:0,77,1009	0/0:20,0:19:27.98:0,28,546	0/0:25,0:25:75.24:0,75,1139	1/1:0,20:20:54.18:754,54,0	1/1:0,22:22:57.19:796,57,0	0/0:26,0:26:69.16:0,69,968	1/1:0,17:17:42.14:585,42,0	0/0:18,0:18:54.15:0,54,808	0/0:19,0:19:51.05:0,51,676	1/1:0,12:12:33.11:461,33,0	0/0:8,0:8:24.08:0,24,372	1/1:0,13:13:36.12:503,36,0	1/1:0,17:17:48.16:670,48,0	1/1:0,13:13:33.11:461,33,0	1/1:0,35:35:93.31:1298,93,0	0/0:29,0:29:78.05:0,78,1103	1/1:1,27:28:81.22:1065,81,0	1/1:0,22:22:63.21:878,63,0	1/1:1,21:22:48.16:670,48,0	1/1:0,19:19:48.16:669,48,0	0/0:19,0:19:56.91:0,57,830	0/0:20,0:20:60.13:0,60,853	1/1:0,12:12:36.12:502,36,0	0/1:3,23:26:62.37:833,0,62	1/1:0,17:17:45.15:628,45,0	1/1:0,25:25:75.25:1047,75,0
chr10	68526500	.	G	GCACA	19543.21	PASS	AB=0.808;AC=40;AF=0.714;AN=56;BaseQRankSum=-8.542;DP=742;FS=5.312;HRun=0;HaplotypeScore=126.6007;InbreedingCoeff=0.8124;MQ=66.34;MQ0=0;MQRankSum=-4.332;QD=37.15;ReadPosRankSum=-0.127;VQSLOD=4.8272;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:52:99:0,123,1930	1/1:1,2:5:11.51:173,12,0	0/0:33,0:25:39.15:0,39,755	0/1:38,0:34:21.63:22,0,620	0/0:22,0:23:57.18:0,57,916	0/1:9,13:24:20.33:576,0,20	1/1:13,16:29:48.16:1164,48,0	1/1:28,0:27:30.81:513,31,0	1/1:12,13:26:44.89:1029,45,0	1/1:12,17:32:62.92:1340,63,0	1/1:5,12:18:32.85:753,33,0	1/1:5,16:26:44.62:985,45,0	0/0:31,0:31:66.22:0,66,1082	1/1:11,15:27:14.25:915,14,0	1/1:13,24:42:15.26:1319,15,0	1/1:6,17:24:54.19:1290,54,0	1/1:8,20:30:56.66:1284,57,0	0/0:22,0:24:53.21:0,53,849	1/1:7,13:22:26.18:1116,26,0	1/1:6,12:19:32.85:732,33,0	1/1:8,28:38:65.92:1570,66,0	1/1:6,7:14:21.07:493,21,0	0/0:21,0:21:51.16:0,51,812	0/0:31,0:32:75.23:0,75,1203	1/1:3,14:17:39.13:964,39,0	1/1:9,16:28:62.68:1329,63,0	1/1:7,22:30:66.23:1607,66,0	1/1:2,7:9:15.05:371,15,0
chr10	68527487	.	G	GA	4228.29	PASS	AB=0.733;AC=30;AF=0.536;AN=56;BaseQRankSum=4.193;DP=507;FS=11.394;HRun=11;HaplotypeScore=78.8632;InbreedingCoeff=0.5915;MQ=70.14;MQ0=0;MQRankSum=-0.640;QD=16.02;ReadPosRankSum=-0.826;VQSLOD=4.5675;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:56:99:0,115,888	0/1:4,0:4:17.04:17,0,29	0/0:17,0:17:19.53:0,20,150	0/0:9,0:7:1.49:0,1,34	0/0:13,0:13:20.83:0,21,162	0/1:7,14:21:7.81:320,0,8	1/1:11,12:23:0.53:257,1,0	0/0:6,0:29:45.69:0,46,132	1/1:2,12:14:26.97:260,27,0	0/0:18,0:18:1.51:0,2,91	0/0:9,0:9:20.24:0,20,110	1/1:1,15:16:12.44:283,12,0	0/0:14,0:14:38.85:0,39,302	1/1:2,7:9:10.57:95,11,0	1/1:8,5:13:7.29:150,7,0	1/1:3,14:17:22.91:373,23,0	0/1:14,13:28:11.70:434,0,12	0/0:1,0:27:52.96:0,53,153	1/1:5,10:15:33.01:317,33,0	1/1:6,11:17:36.53:359,37,0	1/1:3,7:10:17.99:171,18,0	0/1:4,4:8:2.52:69,0,3	0/0:11,0:11:29.87:0,30,232	0/0:36,0:39:99:0,105,778	1/1:3,14:17:9.81:226,10,0	1/1:8,16:24:36.06:458,36,0	1/1:7,10:17:0.30:224,0,0	1/1:1,9:11:12.44:215,12,0
chr10	68527965	.	CTTGTTTGT	C	10118.64	PASS	AB=0.640;AC=35;AF=0.648;AN=54;BaseQRankSum=10.172;DP=589;FS=0.870;HRun=0;HaplotypeScore=146.6511;InbreedingCoeff=0.8101;MQ=58.13;MQ0=9;MQRankSum=-13.623;QD=28.75;ReadPosRankSum=1.497;VQSLOD=4.7119;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:41:96.31:0,96,3698	1/1:7,8:15:24.08:612,24,0	0/0:16,0:11:17.85:0,18,594	0/0:10,0:6:3.01:0,3,84	0/0:31,0:31:78.22:0,78,2721	1/1:10,17:27:36.12:919,36,0	1/1:9,10:19:18.02:403,18,0	./.	1/1:6,12:18:21.03:479,21,0	0/0:5,0:20:50.86:0,51,433	0/1:7,1:16:40.99:41,0,231	1/1:7,19:26:39.09:938,39,0	0/0:16,0:16:24.08:0,24,899	1/1:5,17:21:39.13:995,39,0	1/1:3,15:19:27.05:612,27,0	1/1:2,10:12:27.05:632,27,0	1/1:9,23:32:30.06:709,30,0	0/0:15,0:15:0.47:0,0,1	1/1:10,3:11:8.99:173,9,0	1/1:6,14:20:29.95:594,30,0	1/1:8,9:17:5.91:38,6,0	1/1:6,7:13:11.91:249,12,0	0/0:22,0:22:39.12:0,39,1394	0/0:48,0:48:99:0,120,4287	1/1:5,21:26:33.03:729,33,0	1/1:8,23:30:63.13:1307,63,0	1/1:8,15:23:20.87:536,21,0	1/1:0,3:3:6.02:153,6,0
chr10	68529933	.	C	CT	489.53	PASS	AC=4;AF=0.074;AN=54;BaseQRankSum=-4.566;DP=431;FS=3.135;HRun=9;HaplotypeScore=55.3298;InbreedingCoeff=0.7717;MQ=52.85;MQ0=15;MQRankSum=2.563;QD=17.48;ReadPosRankSum=0.096;VQSLOD=3.6873;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:74.90:0,75,631	0/0:4,0:4:11.99:0,12,102	./.	0/0:19,1:4:8.68:0,9,63	0/0:14,0:14:35.94:0,36,299	0/0:18,0:18:47.98:0,48,413	0/0:10,0:9:20.98:0,21,179	0/0:16,0:14:32.97:0,33,283	0/0:10,0:10:17.98:0,18,153	1/1:3,11:14:33.03:343,33,0	1/1:3,11:14:24.06:265,24,0	0/0:11,0:11:17.95:0,18,151	0/0:19,0:19:41.90:0,42,350	0/0:9,0:9:9:0,9,78	0/0:10,0:10:23.98:0,24,206	0/0:9,0:9:20.98:0,21,182	0/0:34,0:34:56.96:0,57,494	0/0:22,0:21:41.93:0,42,354	0/0:22,0:20:50.89:0,51,423	0/0:14,0:13:26.98:0,27,234	0/0:16,0:16:41.93:0,42,351	0/0:1,0:1:2.92:0,3,17	0/0:1,0:1:3:0,3,26	0/0:15,0:15:38.91:0,39,324	0/0:15,0:15:29.97:0,30,260	0/0:18,0:18:50.97:0,51,439	0/0:32,0:31:44.69:0,45,603	0/0:5,0:5:15:0,15,130
chr10	68530136	.	C	CT	436.44	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-0.659;DP=414;FS=1.486;HRun=12;HaplotypeScore=103.8345;InbreedingCoeff=0.6536;MQ=55.61;MQ0=10;MQRankSum=0.391;QD=8.91;ReadPosRankSum=-2.368;VQSLOD=2.4819;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,1:36:69.22:0,69,470	0/0:4,0:4:2.21:0,2,7	0/0:34,0:19:10.98:0,11,107	0/0:17,0:6:1.19:0,1,15	0/0:17,0:18:12.10:0,12,172	0/0:6,0:6:13.78:0,14,48	0/0:21,0:21:30.55:0,31,100	0/0:31,0:31:15.79:0,16,187	0/0:12,0:12:23.94:0,24,77	1/1:8,6:13:13.49:120,13,0	1/1:12,6:16:12.86:155,13,0	0/0:17,0:16:29.50:0,30,88	0/0:11,0:11:16.83:0,17,116	0/0:6,0:5:9.29:0,9,29	0/0:9,0:9:10.50:0,11,32	0/0:11,0:10:20.93:0,21,64	0/0:30,0:29:38.61:0,39,152	1/1:3,11:15:29.95:279,30,0	0/0:12,0:12:8.93:0,9,43	0/0:5,0:5:1.96:0,2,6	0/0:12,0:12:5.77:0,6,17	0/0:3,0:3:4.62:0,5,16	0/0:12,0:12:23.39:0,23,159	0/0:18,0:18:35.66:0,36,256	0/0:6,0:6:8.85:0,9,29	0/0:14,0:14:2.28:0,2,35	0/0:19,0:19:24.11:0,24,78	1/1:1,1:2:2.99:23,3,0
chr10	68530146	.	TTTC	T	929.11	PASS	AB=0.950;AC=27;AF=0.482;AN=56;BaseQRankSum=11.416;DP=402;FS=2.080;HRun=0;HaplotypeScore=111.6687;InbreedingCoeff=0.3720;MQ=53.96;MQ0=21;MQRankSum=-8.877;QD=4.00;ReadPosRankSum=3.923;VQSLOD=1.8771;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:81.10:0,81,1526	0/0:3,0:3:6.54:0,7,34	0/0:38,0:16:33.11:0,33,434	0/1:18,0:4:2.88:3,0,40	0/0:17,0:17:42.50:0,42,650	0/1:7,0:7:10.75:11,0,12	1/1:19,0:19:12.72:103,13,0	0/1:27,1:26:47.38:47,0,434	1/1:13,0:12:9.57:106,10,0	0/1:14,1:13:10.21:10,0,145	0/0:19,0:17:13.71:0,14,247	1/1:17,0:16:21.51:108,22,0	0/0:12,0:12:24.31:0,24,449	1/1:6,0:5:6.87:26,7,0	0/1:8,0:8:9.08:50,0,9	1/1:10,2:11:14.64:134,15,0	1/1:31,0:29:18.25:142,18,0	0/0:13,0:13:32.97:0,33,478	0/1:8,1:9:39.37:67,0,39	0/1:2,1:3:3.12:3,0,11	1/1:7,0:7:9.11:63,9,0	0/1:3,0:3:2.45:2,0,14	0/0:10,0:10:27.09:0,27,535	0/0:18,0:17:45.14:0,45,908	1/1:4,0:4:5.38:22,5,0	0/1:13,0:13:33.98:34,0,63	1/1:17,2:19:27.45:188,27,0	0/0:2,0:2:6:0,6,61
chr10	68530147	.	TTC	T	4777.09	PASS	AB=0.884;AC=34;AF=0.607;AN=56;BaseQRankSum=8.026;DP=398;FS=4.161;HRun=0;HaplotypeScore=93.4303;InbreedingCoeff=0.6065;MQ=54.00;MQ0=21;MQRankSum=-8.405;QD=20.59;ReadPosRankSum=0.555;VQSLOD=4.7385;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:82.70:0,83,1204	1/1:3,0:3:5.46:31,5,0	0/0:38,0:16:13.70:0,14,206	0/0:18,0:4:1.75:0,2,20	0/0:16,0:16:36.56:0,37,441	1/1:4,3:7:17.85:176,18,0	1/1:1,18:19:56.94:666,57,0	0/1:27,1:26:83.99:84,0,163	1/1:4,9:12:35.86:378,36,0	0/1:15,0:13:33.52:34,0,59	0/1:19,0:17:3.16:3,0,101	1/1:5,12:16:47.95:554,48,0	0/0:13,0:13:21:0,21,335	1/1:2,4:5:14.98:158,15,0	1/1:2,5:7:20.95:219,21,0	1/1:4,8:11:32.63:346,33,0	1/1:14,16:28:77.07:755,77,0	0/0:14,0:14:34.18:0,34,361	1/1:8,1:9:8.08:184,8,0	1/1:2,1:3:2.88:40,3,0	1/1:2,5:7:11:111,11,0	1/1:1,1:2:5.95:58,6,0	0/0:9,0:9:27.05:0,27,396	0/0:18,0:17:45.12:0,45,717	1/1:1,3:4:11.95:137,12,0	0/1:3,9:12:4.57:268,0,5	1/1:7,12:19:56.04:575,56,0	0/0:2,0:2:2.99:0,3,24
chr10	68530161	.	TGGGGACC	T	8200.59	PASS	AC=32;AF=0.571;AN=56;BaseQRankSum=11.075;DP=316;FS=1.131;HRun=0;HaplotypeScore=88.7421;InbreedingCoeff=0.8118;MQ=42.07;MQ0=25;MQRankSum=-7.988;QD=59.42;ReadPosRankSum=1.014;VQSLOD=4.5829;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:75.26:0,75,2828	1/1:0,1:1:3.01:81,3,0	0/0:19,0:3:6.02:0,6,110	0/0:11,0:3:3.01:0,3,63	0/0:12,0:12:17.89:0,18,604	1/1:0,4:4:9.03:242,9,0	1/1:3,15:15:42.14:1089,42,0	0/0:22,0:19:51.17:0,51,1741	1/1:2,9:10:24.08:645,24,0	0/0:11,0:8:15.05:0,15,613	0/0:12,0:10:18.06:0,18,695	1/1:1,13:13:39.13:1035,39,0	0/0:12,0:12:18.06:0,18,618	1/1:0,5:4:12.04:323,12,0	1/1:0,6:6:18.06:485,18,0	1/1:0,10:9:27.09:727,27,0	1/1:5,16:20:39.13:1050,39,0	0/0:18,0:18:45.15:0,45,1840	1/1:0,4:4:12.04:323,12,0	1/1:2,1:3:3.01:81,3,0	1/1:2,8:9:6.02:161,6,0	1/1:0,2:2:3.01:81,3,0	0/0:5,0:4:12.04:0,12,418	0/0:18,0:17:42.62:0,43,1702	1/1:0,3:3:8.99:181,9,0	1/1:3,5:8:15.05:404,15,0	1/1:1,17:17:48.16:1293,48,0	0/0:1,0:1:3.01:0,3,96
chr10	68530424	.	C	CTTT	6392.52	PASS	AB=1.000;AC=37;AF=0.661;AN=56;BaseQRankSum=7.999;DP=416;FS=6.714;HRun=10;HaplotypeScore=145.3557;InbreedingCoeff=0.6808;MQ=50.88;MQ0=5;MQRankSum=-9.279;QD=21.67;ReadPosRankSum=-3.541;VQSLOD=1.5967;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:24:42.20:0,42,607	1/1:8,1:9:17.87:234,18,0	0/0:14,0:8:1.74:0,2,3	0/0:25,0:12:8.49:0,8,77	0/0:17,0:17:29.99:0,30,364	1/1:13,6:21:53.94:712,54,0	1/1:16,0:18:31.73:345,32,0	0/1:25,0:23:14.97:15,0,232	1/1:12,4:15:41.98:583,42,0	0/1:14,0:14:41.93:73,0,42	0/0:8,0:7:7.22:0,7,29	1/1:7,0:7:20.98:245,21,0	0/0:9,0:9:14.92:0,15,173	1/1:17,7:25:62.76:826,63,0	1/1:12,0:11:20.98:253,21,0	1/1:8,1:9:17.98:222,18,0	1/1:12,7:19:14.85:192,15,0	0/0:9,0:9:18.03:0,18,219	1/1:18,2:20:39.69:509,40,0	1/1:12,2:12:21.06:294,21,0	1/1:8,0:8:11.94:112,12,0	1/1:0,1:1:3.01:58,3,0	0/0:13,0:13:27:0,27,316	0/1:13,0:13:5.31:5,0,186	1/1:14,1:16:44.17:457,44,0	1/1:15,2:18:36:465,36,0	1/1:19,4:24:56.84:718,57,0	1/1:4,0:4:8.99:74,9,0
chr10	68530429	.	T	TTTTTTTTTC	14297.59	PASS	AB=1.000;AC=39;AF=0.696;AN=56;BaseQRankSum=4.814;DP=432;FS=1.522;HRun=0;HaplotypeScore=161.3763;InbreedingCoeff=0.5946;MQ=47.75;MQ0=8;MQRankSum=-9.133;QD=42.18;ReadPosRankSum=-0.116;VQSLOD=4.7537;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:23:43.29:0,43,1081	1/1:9,0:9:17.81:409,18,0	0/1:20,0:4:0.97:2,0,1	0/1:33,0:11:2.90:3,0,98	0/0:19,0:18:42.47:0,42,875	1/1:20,0:21:62.77:1766,63,0	1/1:16,0:16:35.84:774,36,0	0/1:27,0:25:99:142,0,199	1/1:16,1:15:42.12:1384,42,0	0/1:15,0:14:72.40:117,0,72	0/1:13,0:11:3.94:31,0,4	1/1:8,0:8:24.08:618,24,0	0/0:11,0:10:26.95:0,27,478	1/1:25,0:25:66.06:1779,66,0	1/1:10,0:9:24.07:488,24,0	1/1:7,0:7:18.06:417,18,0	1/1:14,0:15:17.89:465,18,0	0/0:11,0:11:24.04:0,24,495	1/1:9,8:20:47.62:1251,48,0	1/1:11,0:9:21.06:522,21,0	1/1:8,0:7:12.01:130,12,0	1/1:1,0:1:3.01:107,3,0	0/0:15,0:15:36.04:0,36,762	0/0:12,0:13:0.73:0,1,467	1/1:17,1:18:47.90:1056,48,0	1/1:16,2:17:36.81:1085,37,0	1/1:23,0:24:62.33:1676,62,0	1/1:3,0:3:8.99:74,9,0
chr10	68530432	.	TTTC	T	1197.09	PASS	AB=0.947;AC=25;AF=0.446;AN=56;BaseQRankSum=0.457;DP=436;FS=22.805;HRun=0;HaplotypeScore=130.8596;InbreedingCoeff=-0.2778;MQ=46.98;MQ0=11;MQRankSum=-3.564;QD=4.14;ReadPosRankSum=-0.888;VQSLOD=0.7783;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:23:44.67:0,45,896	0/1:5,4:9:59.27:91,0,59	1/1:24,0:4:5:16,5,0	0/0:37,0:11:13.65:0,14,142	0/0:21,0:20:45.85:0,46,835	0/1:22,0:22:99:112,0,500	0/1:12,2:14:99:107,0,218	0/0:28,0:26:57.05:0,57,750	0/1:15,2:15:43.77:44,0,398	0/1:14,0:13:55.74:67,0,56	1/1:13,0:11:12.05:68,12,0	0/1:8,0:8:21.11:21,0,281	0/0:11,0:10:23.86:0,24,353	0/1:22,3:25:99:131,0,484	0/1:10,0:9:3.16:3,0,322	0/1:9,0:9:52.74:53,0,205	0/1:14,0:14:29.20:29,0,92	0/1:10,0:10:2.35:2,0,387	0/1:18,0:18:52.23:52,0,266	0/1:8,2:8:81.58:130,0,82	0/1:7,0:6:38.03:82,0,38	1/1:1,0:1:1.55:4,2,0	0/0:13,0:13:36.11:0,36,648	0/0:13,0:13:2.67:0,3,389	0/1:17,1:18:99:114,0,405	0/1:19,0:18:48.40:48,0,411	0/1:23,1:24:99:112,0,471	1/1:3,0:3:8.99:74,9,0
chr10	68530441	.	C	CT	579.05	PASS	AB=0.855;AC=16;AF=0.296;AN=54;BaseQRankSum=8.959;DP=457;FS=4.681;HRun=5;HaplotypeScore=134.4822;InbreedingCoeff=-0.1350;MQ=45.31;MQ0=16;MQRankSum=-5.221;QD=2.63;ReadPosRankSum=3.799;VQSLOD=-0.4382;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,1:22:38.74:0,39,409	0/1:8,1:9:31.43:31,0,71	0/0:31,0:5:11.34:0,11,68	0/0:39,0:9:9.45:0,9,87	0/0:22,0:21:61.39:0,61,665	0/1:16,8:24:99:133,0,253	0/1:11,2:12:32.46:32,0,165	0/0:25,0:23:44.73:0,45,469	0/1:14,3:15:31.50:32,0,190	0/1:13,1:12:23.79:64,0,24	1/1:15,0:13:9.22:72,9,0	0/0:9,0:8:24.05:0,24,254	0/0:13,0:12:26.29:0,26,270	0/1:19,7:26:86.23:86,0,299	0/0:11,0:10:14.36:0,14,217	0/1:9,1:9:5.41:5,0,148	0/1:12,2:14:35.12:35,0,108	0/0:14,0:10:22.08:0,22,241	0/1:12,2:14:31.60:32,0,157	0/1:11,2:11:20.72:21,0,59	0/0:5,1:5:6.01:0,6,64	1/1:2,1:3:2.74:12,3,0	0/0:14,0:14:41.79:0,42,453	0/0:13,0:13:20.50:0,21,207	0/0:15,2:17:30.21:0,30,336	0/1:16,4:18:82.45:82,0,203	0/1:21,6:26:98.27:98,0,313	./.
chr10	68530444	.	TTC	T	233.73	PASS	AB=0.946;AC=9;AF=0.161;AN=56;BaseQRankSum=3.568;DP=466;FS=4.863;HRun=0;HaplotypeScore=130.5858;InbreedingCoeff=-0.0173;MQ=44.32;MQ0=22;MQRankSum=-5.596;QD=1.61;ReadPosRankSum=-3.580;VQSLOD=1.2646;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:22:23.45:0,23,417	0/1:8,1:9:21.99:22,0,86	0/0:30,0:5:10.62:0,11,78	0/1:39,0:9:3.20:3,0,90	0/0:22,0:21:54.28:0,54,941	0/1:24,1:25:7.07:7,0,477	0/1:13,0:12:12.96:13,0,273	0/0:25,0:23:44.48:0,44,642	0/0:16,1:15:1.74:0,2,348	0/1:12,3:13:20.54:124,0,21	1/1:12,4:13:12.20:151,12,0	0/0:9,0:8:24.07:0,24,374	0/0:13,0:12:30.90:0,31,399	0/0:26,0:26:3.43:0,3,560	0/0:10,0:9:24.08:0,24,378	0/0:8,0:7:17.80:0,18,259	0/0:17,0:14:5.27:0,5,211	0/1:15,0:10:7.75:8,0,294	0/0:16,0:15:31.76:0,32,361	0/1:12,1:11:36.90:37,0,114	0/0:6,0:5:0.58:0,1,90	0/0:4,0:4:2.35:0,2,27	0/0:15,0:15:38.65:0,39,646	0/0:15,0:14:27.75:0,28,337	0/0:15,0:15:44.41:0,44,558	0/0:22,0:19:26.99:0,27,477	0/0:26,1:26:4.96:0,5,584	0/0:1,0:1:3:0,3,29
chr10	68530450	.	T	TTC	287.02	PASS	AB=0.964;AC=8;AF=0.143;AN=56;BaseQRankSum=4.260;DP=475;FS=7.991;HRun=0;HaplotypeScore=139.8768;InbreedingCoeff=0.0408;MQ=40.10;MQ0=26;MQRankSum=-5.317;QD=1.98;ReadPosRankSum=-2.051;VQSLOD=1.6008;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:17:38.35:0,38,427	0/1:9,0:9:4.90:5,0,112	0/0:28,0:5:5.57:0,6,66	0/1:40,0:7:4.13:4,0,101	0/0:24,0:23:63.15:0,63,898	0/1:25,0:25:14.51:15,0,456	0/1:11,1:10:4.18:4,0,259	0/1:21,4:22:99:106,0,500	0/0:17,0:15:3.13:0,3,281	0/1:19,0:15:18.83:126,0,19	1/1:15,0:13:3.75:146,4,0	0/0:9,0:8:24.08:0,24,359	0/0:13,0:12:33.09:0,33,459	0/0:27,0:26:37.98:0,38,654	0/0:15,0:13:32.89:0,33,414	0/0:8,0:7:17.27:0,17,233	0/0:18,0:13:27.28:0,27,243	0/0:14,0:9:15.33:0,15,308	0/0:15,0:15:14.44:0,14,288	0/0:13,0:11:21.99:0,22,197	0/0:6,0:5:11.93:0,12,128	0/0:4,0:4:9:0,9,78	0/0:16,0:16:45.14:0,45,645	0/0:16,0:15:29.94:0,30,402	0/0:17,0:17:46.83:0,47,547	0/0:20,0:19:27.34:0,27,469	0/0:28,0:27:45.03:0,45,620	0/0:1,0:1:3.01:0,3,36
chr10	68530455	.	CT	C	63.60	PASS	AB=0.902;AC=4;AF=0.071;AN=56;BaseQRankSum=2.930;DP=490;FS=0.772;HRun=8;HaplotypeScore=127.4489;InbreedingCoeff=0.2967;MQ=39.05;MQ0=35;MQRankSum=-3.639;QD=0.92;ReadPosRankSum=-2.831;VQSLOD=-0.6723;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:16:20.64:0,21,251	0/0:9,0:9:8.30:0,8,58	0/1:31,1:5:19.88:20,0,31	0/0:42,1:7:9.46:0,9,87	0/0:25,0:24:60.45:0,60,745	0/0:23,1:24:38.09:0,38,407	0/0:15,0:11:15.44:0,15,234	0/0:22,1:20:22.81:0,23,477	0/0:15,1:14:14.52:0,15,276	0/1:16,4:16:12.73:62,0,13	1/1:13,4:14:16.26:93,16,0	0/0:9,0:8:16.96:0,17,252	0/0:14,0:13:25.51:0,26,294	0/0:26,0:25:32.51:0,33,387	0/0:16,0:13:26.97:0,27,303	0/0:9,0:7:16.87:0,17,200	0/0:18,0:13:19.86:0,20,165	0/0:14,0:9:22.78:0,23,272	0/0:14,0:13:27.35:0,27,234	0/0:12,0:10:3.69:0,4,103	0/0:6,0:6:6.52:0,7,103	0/0:7,0:7:1.78:0,2,36	0/0:16,0:15:43.69:0,44,577	0/0:16,0:15:29.80:0,30,358	0/0:18,0:17:41.62:0,42,433	0/0:22,0:19:27.27:0,27,389	0/0:30,0:29:57.28:0,57,460	0/0:1,0:1:3.01:0,3,31
chr10	68530461	.	CT	C	213.34	PASS	AB=0.960;AC=7;AF=0.125;AN=56;BaseQRankSum=1.930;DP=493;FS=0.000;HRun=5;HaplotypeScore=124.0503;InbreedingCoeff=0.1960;MQ=35.20;MQ0=38;MQRankSum=-2.278;QD=1.40;ReadPosRankSum=0.674;VQSLOD=-0.5920;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:16:18.91:0,19,243	0/0:6,0:6:1.20:0,1,28	0/1:28,0:4:2.20:14,0,2	0/1:42,2:6:2.96:3,0,58	0/0:26,0:25:59.34:0,59,772	0/0:23,0:23:38.79:0,39,184	0/0:18,0:14:8.64:0,9,51	0/0:21,1:18:21.26:0,21,340	0/0:17,0:14:4.32:0,4,164	0/1:18,3:16:22.22:115,0,22	1/1:16,3:16:23.47:178,23,0	0/1:9,0:8:9.80:10,0,42	0/0:12,0:11:25.55:0,26,286	0/0:27,0:26:8.31:0,8,148	0/0:16,0:13:16.58:0,17,133	0/0:9,0:7:13.43:0,13,66	0/0:18,0:13:8.90:0,9,96	0/0:16,0:11:29.02:0,29,331	0/0:13,0:12:24.31:0,24,147	0/0:12,0:11:4.47:0,4,74	0/0:6,0:6:9.10:0,9,61	0/0:8,0:8:8.46:0,8,36	0/0:17,0:15:39.60:0,40,534	0/0:17,0:16:26.87:0,27,308	0/0:17,0:16:29.12:0,29,132	0/0:23,0:20:32.96:0,33,180	0/1:30,0:28:19.56:20,0,120	0/0:1,0:1:2.04:0,2,6
chr10	68530466	.	TC	T	1670.92	PASS	AB=0.984;AC=32;AF=0.571;AN=56;BaseQRankSum=5.413;DP=485;FS=6.462;HRun=1;HaplotypeScore=115.3191;InbreedingCoeff=0.2389;MQ=35.11;MQ0=37;MQRankSum=-4.746;QD=4.65;ReadPosRankSum=3.994;VQSLOD=0.6275;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:15:3.43:0,3,219	0/1:6,0:6:2.72:47,0,3	1/1:18,1:3:4.66:19,5,0	0/1:39,2:6:1.15:1,0,52	0/0:29,0:28:32.20:0,32,687	1/1:21,0:21:15.50:149,15,0	1/1:18,0:14:16.10:102,16,0	0/0:19,0:17:19.35:0,19,190	0/1:15,1:13:43.01:74,0,43	1/1:20,1:16:6.96:94,7,0	1/1:20,0:17:25.44:134,25,0	1/1:8,1:8:5.40:111,5,0	0/0:10,2:11:11.89:0,12,211	1/1:25,0:24:18.04:217,18,0	0/1:15,1:13:38.77:91,0,39	1/1:10,0:8:14.50:65,15,0	0/1:19,0:14:5.26:62,0,5	0/0:16,0:11:12.54:0,13,184	1/1:14,0:13:1.48:74,1,0	0/1:15,0:14:30.56:34,0,31	0/1:6,0:6:26.87:27,0,31	0/1:8,0:8:14.38:30,0,14	0/0:17,0:15:26.05:0,26,532	0/0:17,0:16:22.63:0,23,251	0/1:19,0:18:8.34:121,0,8	0/1:24,0:21:3.78:158,0,4	1/1:27,2:26:15.82:224,16,0	1/1:2,0:1:2.84:14,3,0
chr10	68530467	.	CT	C	4356.62	PASS	AB=0.731;AC=37;AF=0.661;AN=56;BaseQRankSum=4.313;DP=487;FS=39.937;HRun=5;HaplotypeScore=106.5268;InbreedingCoeff=0.5205;MQ=34.82;MQ0=41;MQRankSum=-5.502;QD=12.97;ReadPosRankSum=3.342;VQSLOD=1.9196;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:15:20.76:0,21,190	0/1:4,2:6:11.01:66,0,11	1/1:19,0:2:1.96:8,2,0	0/0:39,1:6:6.88:0,7,53	0/0:30,0:28:50.58:0,51,592	1/1:8,13:21:20.87:407,21,0	1/1:7,11:14:24.60:260,25,0	0/1:19,0:17:7.77:8,0,66	1/1:8,7:13:13.66:181,14,0	1/1:13,8:16:4.53:132,5,0	1/1:7,13:17:25.54:190,26,0	1/1:2,7:8:21.05:223,21,0	0/0:11,0:10:23.60:0,24,240	1/1:11,13:23:26.81:399,27,0	1/1:8,8:13:8.63:234,9,0	1/1:3,8:8:18.01:186,18,0	1/1:13,8:14:19.93:197,20,0	0/0:18,0:13:11:0,11,69	1/1:6,9:14:20.85:249,21,0	0/1:7,7:13:21.73:106,0,22	0/1:3,3:6:24.70:80,0,25	0/1:2,6:8:16.91:81,0,17	0/0:17,0:15:33.17:0,33,529	0/0:17,0:16:21.65:0,22,250	1/1:6,13:18:30.92:350,31,0	1/1:4,19:20:29:469,29,0	1/1:9,20:26:55.06:498,55,0	1/1:1,1:1:3.01:34,3,0
chr10	68530477	.	T	TC	1967.38	PASS	AB=1.000;AC=35;AF=0.673;AN=52;BaseQRankSum=6.909;DP=473;FS=2.739;HRun=0;HaplotypeScore=110.3990;InbreedingCoeff=0.6504;MQ=31.21;MQ0=44;MQRankSum=-3.627;QD=6.49;ReadPosRankSum=1.906;VQSLOD=3.7721;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:19:32.78:0,33,252	0/1:7,0:7:1.64:2,0,31	./.	./.	0/0:32,0:29:68.67:0,69,485	1/1:22,0:23:34.51:284,35,0	1/1:15,0:11:23:130,23,0	0/0:17,0:15:13.20:0,13,195	1/1:11,2:10:15.64:134,16,0	0/1:21,0:17:14.84:115,0,15	1/1:20,0:17:8.72:94,9,0	1/1:7,0:6:9.70:45,10,0	0/0:15,0:13:29.55:0,30,245	0/1:26,0:25:2.04:124,0,2	1/1:14,1:12:15.36:114,15,0	1/1:10,1:8:14.64:86,15,0	1/1:23,3:17:0.21:120,0,0	0/0:20,0:15:36.03:0,36,265	1/1:16,1:15:1.28:86,1,0	1/1:11,1:12:16.82:96,17,0	1/1:6,0:5:8.34:40,8,0	1/1:12,0:12:14.98:63,15,0	0/0:17,0:14:38.33:0,38,320	0/0:16,0:15:6.01:0,6,134	1/1:17,2:18:23.96:164,24,0	1/1:20,1:18:22.75:222,23,0	1/1:28,1:26:22.65:220,23,0	1/1:3,0:1:2.74:12,3,0
chr10	68530481	.	T	TC	267.39	PASS	AB=0.957;AC=16;AF=0.308;AN=52;BaseQRankSum=1.692;DP=472;FS=6.839;HRun=0;HaplotypeScore=125.4953;InbreedingCoeff=-0.0782;MQ=31.41;MQ0=44;MQRankSum=-4.688;QD=1.07;ReadPosRankSum=-1.004;VQSLOD=1.8406;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:19:41.74:0,42,323	0/0:6,0:6:10.11:0,10,52	./.	./.	0/0:32,0:29:74.68:0,75,556	0/1:24,0:24:22.38:65,0,22	1/1:16,0:12:10.12:69,10,0	0/0:15,0:13:7.72:0,8,160	0/1:12,1:10:3.10:37,0,3	0/0:22,0:18:15.15:0,15,115	0/0:20,0:16:27.41:0,27,168	0/1:10,0:9:18.13:26,0,18	0/0:15,0:13:26.70:0,27,224	0/1:26,0:25:34.79:35,0,98	0/1:15,0:12:9.22:16,0,9	0/1:10,1:8:10.93:11,0,18	0/1:25,3:19:28.85:29,0,43	0/0:19,0:14:38.06:0,38,292	0/1:16,1:15:0.35:0,0,51	0/1:11,1:12:10.34:10,0,36	1/1:6,1:5:2.63:19,3,0	0/0:11,0:11:13.69:0,14,75	0/0:16,0:13:35.32:0,35,293	0/0:16,0:15:5.32:0,5,135	0/1:20,1:20:16.12:60,0,16	0/1:19,1:17:13.95:14,0,32	0/1:28,1:26:25.30:25,0,74	0/0:4,0:1:2.37:0,2,8
chr10	68531730	.	AC	A	8899.83	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=11.149;DP=458;FS=24.446;HRun=2;HaplotypeScore=65.2129;InbreedingCoeff=0.9709;MQ=72.30;MQ0=2;MQRankSum=-2.554;QD=36.03;ReadPosRankSum=1.125;VQSLOD=2.8796;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,120,1798	1/1:0,13:13:39.13:506,39,0	0/0:28,0:25:75.24:0,75,1041	0/0:26,0:23:3.42:0,3,674	0/0:22,0:22:66.22:0,66,982	1/1:0,13:13:39.13:507,39,0	1/1:1,14:15:39.13:506,39,0	0/0:11,0:11:30.10:0,30,450	1/1:1,16:17:48.16:623,48,0	1/1:0,7:7:21.05:258,21,0	1/1:1,10:11:33.11:426,33,0	1/1:2,17:19:48.16:623,48,0	0/0:29,0:29:87.26:0,87,1274	1/1:1,15:16:48.16:621,48,0	1/1:0,13:13:39.13:506,39,0	1/1:0,9:9:27.09:350,27,0	1/1:0,16:16:42.14:545,42,0	0/0:19,0:19:57.19:0,57,852	1/1:0,13:11:33.11:429,33,0	1/1:0,8:8:24.08:312,24,0	1/1:0,20:19:48.63:625,49,0	1/1:0,9:8:21.07:273,21,0	0/0:18,0:18:54.18:0,54,809	0/0:17,0:17:51.16:0,51,745	1/1:1,13:14:36.12:467,36,0	1/1:0,17:17:51.17:661,51,0	1/1:0,11:11:33.11:428,33,0	1/1:0,6:6:18.06:234,18,0
chr10	68531761	.	CA	C	4050.25	PASS	AB=1.000;AC=39;AF=0.696;AN=56;BaseQRankSum=13.783;DP=426;FS=48.498;HRun=1;HaplotypeScore=86.1786;InbreedingCoeff=0.8856;MQ=81.92;MQ0=0;MQRankSum=-5.871;QD=17.69;ReadPosRankSum=-8.806;VQSLOD=-0.1647;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:41:99:0,123,1782	1/1:4,2:6:17.96:159,18,0	0/0:24,0:24:58.49:0,58,870	0/0:19,1:19:33.84:0,34,557	0/0:24,0:24:69.18:0,69,967	1/1:9,4:15:33.68:315,34,0	1/1:5,11:16:27.27:327,27,0	0/1:11,0:11:31.88:32,0,51	1/1:7,5:12:29.94:282,30,0	1/1:5,3:8:8.99:86,9,0	1/1:3,0:4:11.70:90,12,0	1/1:12,9:21:32.67:324,33,0	0/0:26,0:26:78.23:0,78,1118	1/1:6,4:10:26.92:234,27,0	1/1:9,3:13:30.08:242,30,0	1/1:3,2:5:14.93:118,15,0	1/1:5,3:8:17.94:159,18,0	0/0:21,0:21:63.21:0,63,940	1/1:5,2:8:23.70:214,24,0	1/1:10,1:11:11.99:113,12,0	1/1:15,4:18:37.32:320,37,0	1/1:7,5:13:18.04:150,18,0	0/0:21,0:21:63.18:0,63,901	0/0:19,0:19:57.18:0,57,830	1/1:5,5:10:18.37:152,18,0	1/1:14,5:19:36.24:319,36,0	1/1:9,6:15:32.33:300,32,0	1/1:3,2:5:14.92:114,15,0
chr10	68531763	.	CA	C	3969.51	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=13.750;DP=437;FS=45.628;HRun=1;HaplotypeScore=83.2264;InbreedingCoeff=0.9570;MQ=81.51;MQ0=0;MQRankSum=-5.787;QD=17.96;ReadPosRankSum=-8.511;VQSLOD=-0.1385;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:44:99:0,126,1895	1/1:5,1:6:17.96:159,18,0	0/0:26,0:26:42.02:0,42,911	0/0:20,1:20:26.26:0,26,593	0/0:24,0:24:69.22:0,69,1053	1/1:14,1:15:32.93:314,33,0	1/1:13,3:16:24.78:308,25,0	0/0:12,0:12:28.49:0,28,328	1/1:13,1:14:33.42:310,33,0	1/1:8,0:8:8.42:85,8,0	1/1:4,0:4:11.42:74,11,0	1/1:21,1:22:34.51:325,35,0	0/0:27,0:27:78.22:0,78,1143	1/1:9,1:10:26.90:224,27,0	1/1:13,1:14:27.40:229,27,0	1/1:5,1:6:17.94:146,18,0	1/1:9,0:9:20.95:185,21,0	0/0:21,0:21:63.17:0,63,925	1/1:7,1:8:23.64:214,24,0	1/1:10,0:10:9:89,9,0	1/1:20,0:19:39.37:338,39,0	1/1:13,1:14:10.47:132,10,0	0/0:21,0:21:63.21:0,63,974	0/0:19,0:19:57.11:0,57,829	1/1:8,1:9:15.37:125,15,0	1/1:16,2:18:32.42:324,32,0	1/1:14,0:14:32.93:300,33,0	1/1:3,1:4:11.94:90,12,0
chr10	68532516	.	TA	T	830.96	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.723;DP=652;FS=8.139;HRun=5;HaplotypeScore=67.1613;InbreedingCoeff=0.8660;MQ=80.79;MQ0=1;MQRankSum=1.336;QD=26.81;ReadPosRankSum=-4.224;VQSLOD=1.3358;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:87.28:0,87,1165	0/0:13,0:13:39.09:0,39,495	0/0:28,0:22:48.91:0,49,543	0/0:26,0:24:3.81:0,4,343	0/0:39,0:39:99:0,111,1454	0/0:24,0:24:69.22:0,69,922	0/0:18,0:18:54.17:0,54,716	1/1:2,29:31:84.20:926,84,0	0/0:22,0:22:63.19:0,63,838	0/0:32,0:32:93.30:0,93,1237	0/0:24,0:24:69.22:0,69,923	0/0:21,0:21:60.19:0,60,801	0/0:20,0:20:60.11:0,60,732	0/0:12,0:12:33.11:0,33,448	0/0:17,0:17:48.15:0,48,634	0/0:19,0:19:57.16:0,57,743	0/0:25,0:25:66.22:0,66,896	0/0:25,0:25:72.19:0,72,927	0/0:19,0:19:57.17:0,57,748	0/0:26,0:26:78.20:0,78,983	0/0:14,0:14:33.11:0,33,447	0/0:22,0:22:66.20:0,66,865	0/0:22,0:22:57.14:0,57,737	0/0:14,0:14:39.10:0,39,497	0/0:17,0:17:51.16:0,51,676	0/0:27,0:27:78.24:0,78,1030	0/0:35,0:33:99:0,105,1397	0/0:28,0:28:84.28:0,84,1139
chr10	68532936	.	G	GTC	23786.03	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=-5.406;DP=744;FS=12.473;HRun=0;HaplotypeScore=96.2101;InbreedingCoeff=0.9997;MQ=92.09;MQ0=1;MQRankSum=-3.232;QD=43.33;ReadPosRankSum=4.454;VQSLOD=6.0734;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,114,1508	1/1:0,11:11:30.10:525,30,0	0/0:34,0:34:75.17:0,75,952	0/0:38,0:37:77.46:0,77,943	0/0:21,0:21:63.19:0,63,831	1/1:1,27:28:69.24:1206,69,0	1/1:4,19:24:51.17:894,51,0	1/1:1,40:42:99:2043,120,0	1/1:2,16:19:45.15:788,45,0	1/1:3,22:25:66.21:1120,66,0	1/1:1,21:22:60.21:1050,60,0	1/1:1,25:26:75.26:1315,75,0	0/0:18,0:18:48.16:0,48,649	1/1:2,13:16:42.14:732,42,0	1/1:3,16:20:48.16:842,48,0	1/1:2,21:24:57.20:999,57,0	1/1:3,28:32:78.27:1358,78,0	1/1:3,22:25:63.22:1104,63,0	1/1:4,17:23:57.17:945,57,0	1/1:2,29:31:83.86:1443,84,0	1/1:3,39:42:99:1788,102,0	1/1:4,29:33:78.27:1367,78,0	0/0:25,0:25:69.20:0,69,900	0/0:19,0:19:54.16:0,54,713	1/1:4,15:19:33.11:579,33,0	1/1:0,26:27:81.26:1375,81,0	1/1:3,38:42:99:1840,105,0	1/1:5,12:17:27.09:473,27,0
chr10	68533227	.	CA	C	14584.64	PASS	AC=34;AF=0.607;AN=56;BaseQRankSum=7.228;DP=663;FS=0.923;HRun=1;HaplotypeScore=82.6318;InbreedingCoeff=0.9990;MQ=79.96;MQ0=0;MQRankSum=-2.154;QD=38.08;ReadPosRankSum=4.312;VQSLOD=5.3752;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,117,1870	1/1:0,13:13:33.11:460,33,0	0/0:25,0:25:70.69:0,71,1088	0/0:13,0:13:19.32:0,19,440	0/0:36,0:36:99:0,105,1665	1/1:0,22:22:60.20:838,60,0	1/1:0,26:26:69.23:964,69,0	0/0:31,0:31:90.31:0,90,1438	1/1:0,22:22:57.19:789,57,0	0/0:14,0:14:42.14:0,42,670	0/0:29,0:29:87.30:0,87,1391	1/1:0,23:23:57.19:797,57,0	0/0:16,0:16:48.16:0,48,767	1/1:0,15:15:39.13:545,39,0	1/1:0,21:21:57.19:797,57,0	1/1:0,18:18:48.16:671,48,0	1/1:0,46:46:99:1719,123,0	0/0:19,0:19:54.10:0,54,803	1/1:0,16:16:48.16:671,48,0	1/1:0,31:31:87.28:1190,87,0	1/1:0,35:35:99:1383,99,0	1/1:0,19:19:57.19:792,57,0	0/0:23,0:23:69.21:0,69,1048	0/0:34,0:34:99:0,102,1597	1/1:0,24:24:66.22:923,66,0	1/1:0,16:16:45.15:628,45,0	1/1:0,25:25:69.23:958,69,0	1/1:0,11:11:33.11:460,33,0
chr10	68535192	.	TG	T	655.57	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=4.088;DP=665;FS=6.680;HRun=1;HaplotypeScore=145.7257;InbreedingCoeff=0.9949;MQ=60.30;MQ0=1;MQRankSum=-5.886;QD=13.66;ReadPosRankSum=-2.910;VQSLOD=1.8199;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:76.50:0,77,1138	0/0:8,0:7:17.93:0,18,245	0/0:27,1:19:50.68:0,51,709	0/0:33,0:29:64.88:0,65,964	0/0:29,0:29:86.30:0,86,1244	0/0:22,0:22:53.83:0,54,752	0/0:23,0:23:62.83:0,63,803	0/0:43,0:42:99:0,114,1486	0/0:22,0:22:62.68:0,63,790	1/1:22,7:27:57.76:528,58,0	1/1:13,6:19:28.96:249,29,0	0/0:25,0:25:68.65:0,69,887	0/0:17,0:17:35.33:0,35,545	0/0:16,0:16:35.99:0,36,513	0/0:31,0:31:86.68:0,87,1124	0/0:15,0:15:38.95:0,39,538	0/0:32,0:32:86.22:0,86,1068	0/0:17,0:17:51.17:0,51,771	0/0:15,0:14:36.06:0,36,490	0/0:20,0:20:56.84:0,57,737	0/0:25,0:25:74.21:0,74,879	0/0:24,0:24:71.79:0,72,976	0/0:19,0:19:57.17:0,57,840	0/0:42,0:42:99:0,126,1787	0/0:19,0:19:50.20:0,50,641	0/0:26,0:26:78.22:0,78,1097	0/0:30,0:30:89.87:0,90,1170	0/0:10,0:10:30.04:0,30,353
chr10	68535195	.	TTG	T	328.25	PASS	AB=0.985;AC=8;AF=0.143;AN=56;BaseQRankSum=-1.083;DP=672;FS=0.489;HRun=0;HaplotypeScore=162.7342;InbreedingCoeff=0.3709;MQ=59.92;MQ0=1;MQRankSum=0.621;QD=2.96;ReadPosRankSum=-8.995;VQSLOD=-0.2189;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:67.02:0,67,1362	0/0:10,0:9:14.84:0,15,129	0/0:29,0:19:3.64:0,4,683	0/0:29,0:26:66.48:0,66,1091	0/0:30,0:30:90.29:0,90,1579	0/0:22,0:22:53.61:0,54,402	0/0:24,2:26:10.75:0,11,348	0/0:42,0:41:59.15:0,59,589	0/1:23,0:23:15.96:16,0,319	1/1:28,0:26:25.20:227,25,0	1/1:19,0:19:13.99:158,14,0	0/0:25,1:26:34.73:0,35,430	0/0:17,0:17:10.50:0,10,225	0/0:17,0:17:32.18:0,32,232	0/0:29,0:29:22.66:0,23,463	0/1:15,1:16:14.94:15,0,215	0/0:34,1:35:35.07:0,35,526	0/0:18,0:18:51.17:0,51,914	0/1:16,0:15:3.59:4,0,134	0/0:21,0:21:18.12:0,18,311	0/0:24,0:24:20.72:0,21,424	0/0:23,0:23:36.63:0,37,432	0/0:19,0:19:54.18:0,54,995	0/0:41,0:41:99:0,123,2049	0/0:17,0:17:21.79:0,22,289	0/0:25,1:26:4.91:0,5,359	0/0:32,1:33:13.39:0,13,455	0/1:9,0:9:48.73:49,0,83
chr10	68535201	.	G	GT	13342.54	PASS	AB=1.000;AC=41;AF=0.732;AN=56;BaseQRankSum=12.705;DP=665;FS=5.187;HRun=5;HaplotypeScore=103.0859;InbreedingCoeff=0.9001;MQ=60.18;MQ0=2;MQRankSum=1.712;QD=28.39;ReadPosRankSum=0.968;VQSLOD=4.5518;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:28:73.87:0,74,842	1/1:1,9:9:21.07:275,21,0	0/0:30,0:17:21.37:0,21,265	0/0:29,0:26:53.87:0,54,542	0/0:30,0:30:90.12:0,90,949	1/1:0,22:22:51.17:670,51,0	1/1:2,24:26:63.19:807,63,0	1/1:7,34:40:96.27:1209,96,0	1/1:1,19:20:48.16:630,48,0	0/1:27,0:25:27.19:65,0,27	1/1:21,0:21:12.26:151,12,0	1/1:0,28:28:69.22:904,69,0	1/1:1,17:18:39.13:511,39,0	1/1:1,18:19:36.12:467,36,0	1/1:5,23:28:60.19:786,60,0	1/1:1,17:18:36.12:472,36,0	1/1:4,32:36:78.25:1019,78,0	0/0:20,0:21:40.56:0,41,477	1/1:3,11:13:33.09:407,33,0	1/1:3,21:24:66.08:809,66,0	1/1:1,21:22:60.20:785,60,0	1/1:1,19:20:57.19:748,57,0	0/0:19,0:19:54.12:0,54,571	0/0:38,0:38:99:0,111,1192	1/1:4,14:18:33.11:432,33,0	1/1:2,20:22:63.16:806,63,0	1/1:3,28:31:93.29:1193,93,0	1/1:0,5:5:15.05:197,15,0
chr10	68536270	.	ATGTGGAGGC	A	24550.43	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=12.404;DP=559;FS=5.347;HRun=0;HaplotypeScore=201.7250;InbreedingCoeff=0.9922;MQ=71.96;MQ0=0;MQRankSum=-15.927;QD=67.08;ReadPosRankSum=2.490;VQSLOD=4.5884;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,114,5058	1/1:1,5:6:18.06:558,18,0	0/0:14,0:14:38.69:0,39,1364	0/0:22,0:21:53.48:0,53,1932	0/0:15,0:15:45.15:0,45,2067	1/1:1,26:27:75.26:2325,75,0	1/1:2,23:25:54.18:1604,54,0	1/1:3,23:26:63.62:1702,64,0	1/1:3,16:19:45.15:1362,45,0	0/0:27,0:27:81.28:0,81,3465	0/0:9,0:9:27.09:0,27,1228	1/1:2,17:19:45.15:1395,45,0	1/1:0,21:21:60.21:1860,60,0	1/1:5,20:25:51.18:1581,51,0	1/1:2,24:26:66.15:2041,66,0	1/1:3,17:20:39.13:1209,39,0	1/1:4,17:21:39.13:1204,39,0	0/0:30,0:30:87.26:0,87,4015	1/1:8,12:20:36.10:992,36,0	1/1:3,7:10:21.07:493,21,0	1/1:7,17:24:29.77:763,30,0	1/1:7,10:17:27.09:745,27,0	0/0:17,0:17:45.15:0,45,2060	0/0:19,0:18:51.17:0,51,2487	1/1:1,4:5:12.04:319,12,0	1/1:4,21:25:60.06:1707,60,0	1/1:0,23:23:66.23:2038,66,0	1/1:0,7:7:21.07:651,21,0
chr10	68536602	.	CTG	C	435.07	PASS	AB=0.667;AC=3;AF=0.056;AN=54;BaseQRankSum=4.215;DP=555;FS=9.665;HRun=0;HaplotypeScore=128.8474;InbreedingCoeff=0.6918;MQ=48.32;MQ0=34;MQRankSum=-4.835;QD=15.54;ReadPosRankSum=1.793;VQSLOD=3.2199;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:29:47.32:0,47,452	0/0:4,0:4:6.02:0,6,101	0/0:9,0:2:2.93:0,3,42	./.	0/0:14,0:13:27.04:0,27,418	0/0:20,0:19:30.08:0,30,495	0/0:29,0:28:21.05:0,21,288	0/0:23,0:18:35.97:0,36,394	0/0:18,0:18:17.09:0,17,279	1/1:5,17:20:45.10:529,45,0	0/1:3,3:6:0:0,0,0	0/0:30,0:28:63.13:0,63,1063	0/0:17,0:16:33.11:0,33,576	0/0:17,0:16:27.09:0,27,460	0/0:18,0:18:14.75:0,15,242	0/0:24,0:24:33.04:0,33,527	0/0:21,0:21:36.07:0,36,570	0/0:30,0:29:77.51:0,78,1233	0/0:27,0:23:52.67:0,53,830	0/0:13,0:11:18.53:0,19,330	0/0:31,0:26:44.63:0,45,672	0/0:18,0:14:9.03:0,9,173	0/0:14,0:14:23.76:0,24,401	0/0:29,0:25:69.24:0,69,1273	0/0:13,0:10:24.08:0,24,385	0/0:29,0:26:56.95:0,57,834	0/0:30,0:28:60.13:0,60,961	0/0:11,0:10:27.09:0,27,421
chr10	68536610	.	CTG	C	341.89	PASS	AC=4;AF=0.077;AN=52;BaseQRankSum=3.734;DP=557;FS=0.924;HRun=0;HaplotypeScore=129.6636;InbreedingCoeff=0.7732;MQ=46.61;MQ0=33;MQRankSum=-3.551;QD=11.03;ReadPosRankSum=-0.559;VQSLOD=3.2914;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:30:20.03:0,20,386	0/0:4,0:4:6.02:0,6,99	./.	./.	0/0:12,0:11:21.07:0,21,371	0/0:22,0:21:21.05:0,21,369	0/0:26,0:25:12.02:0,12,167	0/0:18,0:13:23.16:0,23,267	0/0:22,0:22:17.09:0,17,279	1/1:9,13:21:28.43:425,28,0	1/1:7,2:9:2.99:24,3,0	0/0:30,0:28:54.15:0,54,921	0/0:19,0:18:32.14:0,32,540	0/0:20,0:18:27.08:0,27,454	0/0:21,0:21:15.01:0,15,272	0/0:24,0:24:33.11:0,33,563	0/0:24,0:24:27.09:0,27,470	0/0:32,0:31:87.14:0,87,1350	0/0:23,0:19:51.09:0,51,815	0/0:15,0:13:18.43:0,18,304	0/0:28,0:23:29.60:0,30,500	0/0:19,0:14:9.03:0,9,173	0/0:17,0:17:23.73:0,24,370	0/0:31,0:27:75.25:0,75,1353	0/0:14,0:11:21.07:0,21,341	0/0:27,0:24:56.79:0,57,799	0/0:31,0:29:54.17:0,54,915	0/0:8,0:7:12.04:0,12,213
chr10	68536614	.	CTG	C	331.59	PASS	AB=1.000;AC=3;AF=0.058;AN=52;BaseQRankSum=2.302;DP=557;FS=2.921;HRun=0;HaplotypeScore=135.1105;InbreedingCoeff=0.4519;MQ=45.57;MQ0=31;MQRankSum=-3.964;QD=5.82;ReadPosRankSum=-1.811;VQSLOD=2.8044;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:31:22.71:23,0,204	0/0:3,0:3:3.01:0,3,58	./.	./.	0/0:12,0:11:21.01:0,21,330	0/0:21,0:20:18.06:0,18,344	0/0:26,0:25:8.99:0,9,105	0/0:15,0:10:20.77:0,21,185	0/0:23,0:23:17.07:0,17,258	1/1:23,1:23:46.22:413,46,0	0/0:5,5:10:2.84:0,3,14	0/0:28,0:26:42.11:0,42,767	0/0:19,0:18:32.81:0,33,514	0/0:20,0:18:24.05:0,24,400	0/0:21,0:21:14.99:0,15,251	0/0:26,0:26:30.03:0,30,460	0/0:25,0:25:27.06:0,27,420	0/0:32,0:31:81.25:0,81,1291	0/0:27,0:25:56.31:0,56,764	0/0:15,0:13:18.53:0,19,316	0/0:28,0:23:30.85:0,31,489	0/0:20,0:15:9.03:0,9,171	0/0:15,0:15:20.74:0,21,348	0/0:31,0:27:72.25:0,72,1310	0/0:15,0:12:15.05:0,15,254	0/0:28,0:25:53.59:0,54,687	0/0:31,0:29:48.61:0,49,806	0/0:6,0:5:12.04:0,12,202
chr10	68536616	.	GTCTGTCTCTCTCTCTCTCTCTCTCTC	G	2368.14	PASS	AB=0.977;AC=12;AF=0.231;AN=52;BaseQRankSum=5.760;DP=558;FS=6.593;HRun=0;HaplotypeScore=278.6069;InbreedingCoeff=-0.3554;MQ=45.48;MQ0=30;MQRankSum=-4.329;QD=7.54;ReadPosRankSum=-0.317;VQSLOD=1.6335;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:35,0:33:68.37:68,0,1931	0/0:2,0:2:4.26:0,4,85	./.	./.	0/0:13,0:12:27.06:0,27,976	0/0:22,0:21:17.98:0,18,170	0/0:23,0:22:2.99:0,3,24	0/0:16,0:11:15:0,15,253	0/0:23,0:23:17.24:0,17,187	0/1:24,0:23:99:117,0,1165	0/0:10,0:10:3.01:0,3,159	0/1:27,0:25:88.28:88,0,417	0/1:19,0:18:82.75:83,0,270	0/1:20,0:18:99:117,0,180	0/1:21,0:21:99:124,0,142	0/1:27,0:27:99:347,0,216	0/1:27,0:27:99:177,0,189	0/0:31,0:30:4.47:0,4,993	0/1:16,10:24:99:388,0,267	0/0:15,0:13:14.98:0,15,124	0/1:29,0:23:72.34:72,0,192	0/0:20,0:15:9.01:0,9,103	0/0:15,0:15:21.02:0,21,763	0/0:32,0:28:72.12:0,72,4057	0/0:14,0:11:9:0,9,124	0/1:28,0:26:99:786,0,205	0/1:30,0:29:99:142,0,346	0/0:6,0:5:8.96:0,9,79
chr10	68536620	.	GTCTCTCTCTCTCTCTCTC	G	2630.44	PASS	AB=0.809;AC=28;AF=0.636;AN=44;BaseQRankSum=6.710;DP=561;FS=2.575;HRun=0;HaplotypeScore=223.3046;InbreedingCoeff=0.4973;MQ=45.44;MQ0=32;MQRankSum=-1.475;QD=7.71;ReadPosRankSum=2.182;VQSLOD=2.7760;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:34:30.57:0,31,1245	1/1:2,0:2:1.34:13,1,0	./.	./.	0/0:14,0:12:18.06:0,18,638	./.	./.	0/0:17,0:12:14.97:0,15,341	1/1:8,15:23:0.19:6,0,0	0/0:25,0:25:41.73:0,42,1032	0/0:10,0:10:3.01:0,3,134	1/1:17,9:25:5.05:107,5,0	1/1:11,7:17:3.01:146,3,0	1/1:14,7:19:3.01:121,3,0	0/1:8,13:21:0.88:97,0,1	1/1:9,20:28:9.03:365,9,0	1/1:11,16:28:4.33:233,4,0	0/1:30,0:29:99:350,0,233	1/1:25,0:23:19.64:332,20,0	./.	1/1:25,1:21:1.22:69,1,0	1/1:13,0:16:3:25,3,0	0/0:15,0:15:15.05:0,15,671	0/0:30,0:29:45.15:0,45,2375	1/1:9,0:9:3:26,3,0	1/1:16,0:25:21.81:635,22,0	1/1:14,16:29:5.66:257,6,0	./.
chr10	68536622	.	C	CTG	2224.24	PASS	AB=1.000;AC=31;AF=0.596;AN=52;BaseQRankSum=3.346;DP=566;FS=0.507;HRun=0;HaplotypeScore=129.6630;InbreedingCoeff=0.5743;MQ=44.96;MQ0=32;MQRankSum=2.507;QD=5.81;ReadPosRankSum=0.107;VQSLOD=3.2819;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:36:31.52:0,32,310	0/0:3,0:3:2.67:0,3,25	./.	./.	0/0:12,1:11:6.01:0,6,165	1/1:22,0:19:1.02:62,1,0	1/1:10,17:26:2.97:20,3,0	0/0:20,0:15:9.04:0,9,43	0/0:23,0:23:14.45:0,14,115	0/0:26,0:26:29.93:0,30,268	0/0:11,0:11:3.01:0,3,35	1/1:25,0:24:38.93:324,39,0	0/1:18,0:17:4:118,0,4	1/1:19,0:17:14.95:124,15,0	1/1:21,0:21:14.90:122,15,0	1/1:29,0:28:26.90:230,27,0	1/1:28,0:28:6.88:159,7,0	0/1:29,0:28:49.33:178,0,49	1/1:25,0:23:4.82:186,5,0	1/1:17,0:15:11.76:88,12,0	1/1:27,0:21:17.74:121,18,0	1/1:21,0:16:5.99:49,6,0	0/0:15,0:15:23.19:0,23,201	0/0:34,0:30:38.76:0,39,562	1/1:12,0:9:8.99:75,9,0	1/1:27,0:25:30.32:298,30,0	1/1:30,0:28:6.96:205,7,0	0/1:6,0:5:5.59:49,0,6
chr10	68538825	.	GTA	G	2445.47	PASS	AB=1.000;AC=31;AF=0.554;AN=56;BaseQRankSum=6.925;DP=660;FS=10.235;HRun=0;HaplotypeScore=128.5580;InbreedingCoeff=-0.0273;MQ=49.20;MQ0=23;MQRankSum=0.695;QD=4.90;ReadPosRankSum=-0.590;VQSLOD=2.4756;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:31,0:30:25.55:26,0,317	0/1:9,0:9:4.27:94,0,4	0/0:45,0:13:0.28:0,0,204	0/0:55,0:18:30.89:0,31,269	0/1:18,0:18:11.96:12,0,232	1/1:18,0:18:24.05:160,24,0	1/1:28,1:28:36.35:231,36,0	1/1:29,0:29:50.39:359,50,0	0/1:22,0:21:42.85:43,0,45	0/0:22,1:23:37.80:0,38,506	0/0:11,0:11:29.95:0,30,246	1/1:23,1:24:14.52:172,15,0	1/1:18,0:18:8.85:71,9,0	1/1:22,0:22:8.81:182,9,0	1/1:21,0:21:16.15:142,16,0	0/1:17,0:17:8.76:24,0,9	1/1:23,2:20:4.78:67,5,0	0/1:16,0:16:88.38:88,0,109	0/1:21,0:20:9.70:166,0,10	0/1:21,0:21:10.36:68,0,10	0/1:43,0:38:4.06:216,0,4	0/1:25,0:25:3.45:97,0,3	0/1:11,0:11:0.40:0,0,173	0/0:27,0:27:23.20:0,23,386	0/1:25,0:23:21.95:54,0,22	0/1:24,0:24:32.42:155,0,32	0/1:22,0:20:60.77:106,0,61	0/1:8,0:8:6.03:82,0,6
chr10	68538827	.	ATG	A	5908.37	PASS	AB=0.828;AC=30;AF=0.536;AN=56;BaseQRankSum=5.373;DP=654;FS=13.710;HRun=0;HaplotypeScore=117.2276;InbreedingCoeff=0.4138;MQ=49.56;MQ0=22;MQRankSum=1.914;QD=14.34;ReadPosRankSum=2.387;VQSLOD=4.2584;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:31:52.66:0,53,711	1/1:7,2:9:15.85:187,16,0	0/0:47,0:13:34.66:0,35,486	0/0:56,0:18:46.15:0,46,654	0/0:18,0:18:30.10:0,30,469	1/1:10,8:18:27.08:343,27,0	1/1:25,6:30:35.96:475,36,0	1/1:3,27:30:65.42:890,65,0	0/1:19,2:20:64.03:114,0,64	0/0:23,0:23:46.83:0,47,1002	0/0:13,0:13:33.57:0,34,502	0/1:19,5:24:1.44:385,0,1	1/1:4,13:17:3.19:11,3,0	1/1:19,2:21:19.35:550,19,0	1/1:13,7:20:20.85:280,21,0	0/1:5,11:16:61.40:61,0,62	0/1:23,0:19:8.71:12,0,9	0/0:16,0:16:11.20:0,11,331	1/1:16,4:19:22.40:463,22,0	1/1:18,2:20:0.01:254,0,0	0/1:40,0:36:7.52:570,0,8	1/1:19,5:24:30.77:354,31,0	0/0:11,0:11:21.07:0,21,325	0/0:26,0:26:44.55:0,45,741	0/1:6,20:24:5.55:6,0,77	1/1:24,0:24:4.70:493,5,0	0/1:16,4:18:86.11:239,0,86	0/1:7,1:8:12.72:221,0,13
chr10	68538829	.	G	GTGTA	9892.02	PASS	AB=0.939;AC=25;AF=0.446;AN=56;BaseQRankSum=-3.424;DP=654;FS=32.409;HRun=0;HaplotypeScore=126.3637;InbreedingCoeff=0.4504;MQ=50.18;MQ0=20;MQRankSum=0.184;QD=28.59;ReadPosRankSum=1.320;VQSLOD=3.0020;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:30:52.84:0,53,878	1/1:9,0:9:9.92:162,10,0	0/0:48,0:14:38.61:0,39,586	0/0:59,0:19:50.91:0,51,807	0/0:17,0:17:30.10:0,30,543	1/1:16,0:16:24.97:474,25,0	1/1:28,0:27:41.84:696,42,0	1/1:31,0:31:79.11:1355,79,0	0/1:21,0:21:71.16:252,0,71	0/0:23,0:23:59.28:0,59,1180	0/0:13,0:13:33.57:0,34,573	0/1:23,0:23:11.26:605,0,11	0/0:17,0:17:3.59:0,4,57	1/1:21,0:21:12.84:932,13,0	1/1:19,0:19:20.10:380,20,0	0/1:17,0:17:51.19:103,0,51	0/0:7,16:20:6.01:0,6,71	0/0:15,0:15:14.41:0,14,549	1/1:19,0:19:54.04:918,54,0	1/1:23,0:23:7.59:573,8,0	0/1:39,0:36:43.86:1100,0,44	1/1:23,0:23:27.61:576,28,0	0/0:11,0:11:20.66:0,21,386	0/0:26,0:26:51.15:0,51,898	0/0:25,0:23:9.03:0,9,135	0/1:7,20:28:4.74:973,0,5	0/1:20,0:18:99:406,0,158	0/1:8,0:8:24.77:386,0,25
chr10	68538904	.	TGAGAGAGA	T	5087.33	PASS	AB=0.892;AC=35;AF=0.673;AN=52;BaseQRankSum=8.194;DP=529;FS=1.411;HRun=0;HaplotypeScore=173.0510;InbreedingCoeff=0.5849;MQ=60.50;MQ0=6;MQRankSum=-7.730;QD=15.65;ReadPosRankSum=-0.632;VQSLOD=4.2381;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:30:35.13:0,35,1078	1/1:4,3:8:18.06:423,18,0	./.	./.	0/0:18,0:18:3.82:0,4,588	1/1:12,3:20:12.04:247,12,0	1/1:14,5:21:11.83:191,12,0	0/1:19,0:19:8.10:8,0,28	1/1:8,2:17:15.99:289,16,0	0/0:25,0:25:35.84:0,36,612	0/0:18,0:17:18:0,18,301	1/1:17,2:20:11.06:238,11,0	1/1:10,1:15:7.63:88,8,0	1/1:8,2:12:6.02:150,6,0	1/1:6,6:15:24.08:553,24,0	1/1:15,6:24:24.07:525,24,0	1/1:19,0:20:9.03:190,9,0	1/1:8,1:15:12.89:184,13,0	1/1:12,0:12:6.01:90,6,0	1/1:12,1:14:3.01:75,3,0	0/0:18,0:18:0.47:0,0,1	0/1:13,1:15:2.65:68,0,3	0/0:23,0:22:18.02:0,18,389	0/0:27,0:27:45.59:0,46,1286	1/1:12,4:19:21.03:395,21,0	0/1:17,2:21:53.04:370,0,53	1/1:14,10:28:39.13:931,39,0	1/1:3,2:5:3.48:73,3,0
chr10	68539202	.	CG	C	16021.37	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=18.925;DP=692;FS=7.005;HRun=1;HaplotypeScore=105.6084;InbreedingCoeff=0.9984;MQ=84.61;MQ0=0;MQRankSum=-2.481;QD=37.88;ReadPosRankSum=1.928;VQSLOD=4.7591;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:67,0:67:99:0,199,3031	1/1:0,9:9:24.01:311,24,0	0/0:25,0:25:61.28:0,61,1042	0/0:21,0:21:60.07:0,60,875	0/0:23,0:23:69.10:0,69,996	1/1:0,25:25:69.19:941,69,0	1/1:0,24:24:60.20:837,60,0	1/1:0,22:22:66.14:820,66,0	1/1:0,33:33:93.31:1298,93,0	0/0:41,0:41:99:0,114,1726	0/0:15,0:15:42.13:0,42,641	1/1:0,24:24:66.22:921,66,0	1/1:1,25:26:74.98:1017,75,0	1/1:0,20:20:57.19:796,57,0	1/1:0,24:24:69.23:962,69,0	1/1:0,32:32:87.29:1207,87,0	1/1:0,29:29:75.25:1046,75,0	0/0:26,0:26:78.27:0,78,1232	1/1:0,18:18:54.15:713,54,0	1/1:0,28:28:78.26:1086,78,0	1/1:0,26:26:72.24:1006,72,0	1/1:0,24:24:60.10:779,60,0	0/0:21,0:21:55.73:0,56,867	0/0:30,0:30:90.24:0,90,1382	1/1:0,17:17:45.15:628,45,0	1/1:0,16:16:48.15:650,48,0	1/1:0,19:19:54.18:754,54,0	1/1:0,7:7:18.06:250,18,0
chr10	68539484	.	CTGTG	C	793.90	PASS	AB=0.930;AC=25;AF=0.625;AN=40;BaseQRankSum=5.138;DP=591;FS=43.585;HRun=0;HaplotypeScore=122.9132;InbreedingCoeff=0.2978;MQ=73.29;MQ0=14;MQRankSum=-1.003;QD=2.59;ReadPosRankSum=-1.246;VQSLOD=0.6667;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:24.51:0,25,342	./.	./.	./.	0/0:13,0:11:9:0,9,90	./.	1/1:22,0:23:2.91:18,3,0	0/0:30,0:30:2.80:0,3,13	1/1:10,1:13:3.85:47,4,0	0/0:21,0:21:0.47:0,0,1	./.	1/1:21,0:20:9:95,9,0	1/1:16,2:20:12.03:147,12,0	1/1:13,2:15:3.01:46,3,0	0/1:16,1:16:14.28:53,0,14	0/1:17,2:19:11.56:101,0,12	0/1:29,2:29:40.77:78,0,41	1/1:20,0:20:2.14:32,2,0	./.	1/1:10,2:12:5.77:88,6,0	1/1:61,0:60:6.02:82,6,0	1/1:14,3:18:5.75:91,6,0	0/0:14,0:14:3.01:0,3,65	0/0:30,0:31:23.82:0,24,406	1/1:11,0:12:0.89:2,1,0	./.	1/1:22,1:23:3.01:46,3,0	./.
chr10	68540316	.	TCCTC	T	15606.43	PASS	AB=0.617;AC=40;AF=0.714;AN=56;BaseQRankSum=-15.645;DP=504;FS=11.564;HRun=0;HaplotypeScore=112.0848;InbreedingCoeff=0.8174;MQ=71.71;MQ0=6;MQRankSum=-6.222;QD=42.29;ReadPosRankSum=0.043;VQSLOD=4.9374;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:0,0:25:72.08:0,72,672	1/1:1,7:8:21.07:413,21,0	0/1:5,0:13:63.99:64,0,277	0/1:4,0:10:45.72:46,0,46	0/0:0,0:22:17.97:0,18,400	1/1:0,13:12:30.10:593,30,0	1/1:1,19:19:51.18:1011,51,0	1/1:2,18:20:54.17:966,54,0	1/1:0,20:20:54.19:1072,54,0	0/0:0,0:28:30:0,30,646	0/0:0,0:9:24.03:0,24,224	1/1:2,20:22:54.19:1076,54,0	1/1:1,19:19:39.13:778,39,0	1/1:1,12:13:24.08:479,24,0	1/1:0,21:21:51.18:1018,51,0	1/1:0,18:18:48.16:958,48,0	1/1:0,22:21:42.14:839,42,0	0/0:0,0:11:32.41:0,32,288	1/1:2,15:17:42.14:809,42,0	1/1:1,12:13:30.10:591,30,0	1/1:0,39:38:72.25:1420,72,0	1/1:1,11:12:21.07:411,21,0	0/0:0,0:23:42.04:0,42,485	0/0:0,0:17:18.36:0,18,321	1/1:0,21:22:57.20:1117,57,0	1/1:0,17:17:51.14:930,51,0	1/1:0,17:17:36.06:717,36,0	1/1:0,10:10:15.05:299,15,0
chr10	68540708	.	CG	C	7923.51	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=7.877;DP=509;FS=10.215;HRun=8;HaplotypeScore=56.4610;InbreedingCoeff=0.9499;MQ=81.15;MQ0=0;MQRankSum=-2.433;QD=21.13;ReadPosRankSum=1.048;VQSLOD=4.5650;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:63.18:0,63,742	1/1:2,8:10:21.03:202,21,0	0/0:15,0:13:26.49:0,26,261	0/0:17,0:17:11.10:0,11,133	0/0:9,0:9:15.02:0,15,157	1/1:2,11:13:30.04:289,30,0	1/1:3,21:24:54.09:521,54,0	1/1:5,19:24:50.75:456,51,0	1/1:1,19:20:54.09:521,54,0	1/1:4,5:9:15.02:144,15,0	1/1:1,6:7:14.98:135,15,0	1/1:2,28:30:63.10:608,63,0	1/1:1,17:18:39.06:376,39,0	1/1:1,17:18:48.08:463,48,0	1/1:0,17:17:39.06:376,39,0	1/1:0,9:9:21.03:203,21,0	1/1:4,25:29:72.11:695,72,0	0/0:31,0:31:75.12:0,75,863	1/1:2,8:10:24.03:232,24,0	1/1:2,11:13:24.01:231,24,0	1/1:8,41:49:90.14:867,90,0	1/1:3,8:11:24.04:231,24,0	0/0:13,0:13:27.06:0,27,303	0/0:22,0:22:60.18:0,60,725	1/1:3,25:28:68.90:649,69,0	1/1:7,17:24:48.07:463,48,0	1/1:1,10:11:24.04:231,24,0	1/1:0,1:1:3:29,3,0
chr10	68541795	.	A	ATGCCTGCC	16620.87	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-7.933;DP=560;FS=0.000;HRun=0;HaplotypeScore=130.9943;InbreedingCoeff=0.9167;MQ=68.78;MQ0=0;MQRankSum=-12.970;QD=45.66;ReadPosRankSum=-1.972;VQSLOD=4.3346;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:22:44.35:0,44,1060	1/1:3,4:7:9.03:372,9,0	0/0:24,0:22:24.08:0,24,585	0/0:24,0:22:24.08:0,24,561	0/0:21,0:21:30.10:0,30,691	1/1:9,5:14:21.07:781,21,0	1/1:7,15:22:42.10:1462,42,0	1/1:20,0:20:15.05:479,15,0	1/1:16,17:36:57.20:2357,57,0	0/0:22,0:22:39.12:0,39,926	0/0:12,0:12:24.07:0,24,560	1/1:14,11:26:27.09:982,27,0	1/1:10,12:22:39.13:1526,39,0	1/1:14,13:29:48.12:1831,48,0	1/1:8,9:17:24.08:993,24,0	1/1:10,8:18:24.08:990,24,0	1/1:13,18:32:51.13:1874,51,0	0/0:33,0:33:81.24:0,81,1888	1/1:11,1:13:9.03:293,9,0	1/1:6,3:9:6.02:194,6,0	1/1:15,7:21:15.05:553,15,0	1/1:16,5:22:5.98:143,6,0	0/0:18,0:18:36.12:0,36,882	0/0:19,0:19:35.75:0,36,771	1/1:5,3:8:6.02:248,6,0	1/1:10,4:14:13.86:427,14,0	1/1:10,6:17:11.91:497,12,0	1/1:10,5:16:15.05:621,15,0
chr10	68542147	.	G	GTTT	18350.30	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-16.717;DP=674;FS=9.570;HRun=2;HaplotypeScore=75.0248;InbreedingCoeff=0.9758;MQ=74.86;MQ0=6;MQRankSum=0.192;QD=42.77;ReadPosRankSum=3.780;VQSLOD=3.5825;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,126,1971	1/1:0,11:11:15:314,15,0	0/0:36,0:24:62.34:0,62,854	0/0:29,0:27:76.78:0,77,873	0/0:19,0:19:57.14:0,57,886	1/1:1,22:24:19.38:794,19,0	1/1:1,32:34:49.43:1477,49,0	1/1:1,26:28:71.20:1280,71,0	1/1:0,25:25:51.18:1252,51,0	0/0:23,0:23:66.14:0,66,1047	0/0:23,0:23:63.11:0,63,926	1/1:0,25:26:54.03:1324,54,0	1/1:0,24:24:45.15:1106,45,0	1/1:0,8:8:12.04:295,12,0	1/1:0,29:30:57.20:1394,57,0	1/1:1,17:19:12.38:645,12,0	1/1:0,30:30:57.20:1401,57,0	0/0:19,0:19:55.96:0,56,914	1/1:0,14:15:45.04:648,45,0	1/1:0,23:24:59.80:1054,60,0	1/1:2,31:34:33.85:1091,34,0	1/1:0,16:21:47.73:794,48,0	0/0:22,0:21:63.13:0,63,937	0/0:30,0:30:87.19:0,87,1362	1/1:2,11:14:13.27:569,13,0	1/1:1,33:34:46.45:1968,46,0	1/1:0,16:18:18.06:442,18,0	1/1:1,9:10:10.53:502,11,0
chr10	68542810	.	TA	T	11091.30	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=13.613;DP=657;FS=5.224;HRun=6;HaplotypeScore=77.4883;InbreedingCoeff=0.9832;MQ=81.89;MQ0=0;MQRankSum=-4.177;QD=26.86;ReadPosRankSum=0.982;VQSLOD=5.4253;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:67,0:67:99:0,187,2447	1/1:2,7:9:21.05:225,21,0	0/0:20,0:20:47.75:0,48,534	0/0:18,0:18:11.51:0,12,443	0/0:21,0:21:60.19:0,60,780	1/1:1,28:29:69.17:741,69,0	1/1:0,26:26:75.19:806,75,0	1/1:5,28:33:81.15:850,81,0	1/1:1,17:18:48.12:515,48,0	0/0:22,0:22:54.17:0,54,694	0/0:24,0:24:72.22:0,72,932	1/1:2,16:18:45.11:483,45,0	1/1:0,16:16:45.11:483,45,0	1/1:1,14:15:39.10:419,39,0	1/1:0,18:18:51.13:548,51,0	1/1:0,17:17:51.13:547,51,0	1/1:5,26:31:66.16:709,66,0	0/0:26,0:26:66.14:0,66,815	1/1:2,26:28:75.14:781,75,0	1/1:1,17:18:48.04:489,48,0	1/1:3,34:37:87.22:935,87,0	1/1:1,15:16:33.08:352,33,0	0/0:13,0:13:30.10:0,30,395	0/0:33,0:33:96.29:0,96,1228	1/1:0,19:19:48.12:515,48,0	1/1:4,28:32:8.27:791,8,0	1/1:0,21:21:54.14:580,54,0	1/1:0,12:12:30.08:322,30,0
chr10	68543168	.	TA	T	9641.40	PASS	AB=0.540;AC=37;AF=0.661;AN=56;BaseQRankSum=14.233;DP=531;FS=17.604;HRun=4;HaplotypeScore=76.1317;InbreedingCoeff=0.9088;MQ=84.77;MQ0=0;MQRankSum=-5.182;QD=31.41;ReadPosRankSum=0.506;VQSLOD=3.1766;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,147,2005	1/1:1,8:9:24.07:288,24,0	0/0:19,0:19:54.18:0,54,747	0/0:21,0:21:15.57:0,16,690	0/0:14,0:14:42.13:0,42,571	1/1:1,9:10:24.07:288,24,0	1/1:0,28:28:75.23:900,75,0	1/1:0,25:25:72.19:840,72,0	1/1:1,13:14:33.10:396,33,0	0/0:19,0:19:54.17:0,54,739	0/0:19,0:19:51.17:0,51,713	1/1:2,10:12:30.09:360,30,0	1/1:0,9:9:24.07:288,24,0	1/1:0,5:5:15.05:180,15,0	1/1:0,12:12:36.11:432,36,0	1/1:0,13:13:39.12:467,39,0	1/1:2,33:35:96.29:1150,96,0	0/0:28,0:28:72.20:0,72,965	1/1:1,12:13:36.05:402,36,0	1/1:0,17:17:51.16:609,51,0	1/1:1,35:36:90.28:1079,90,0	1/1:0,7:7:18.05:214,18,0	0/0:14,0:14:42.14:0,42,584	0/0:38,0:38:99:0,111,1506	1/1:1,11:12:26.95:323,27,0	0/1:4,23:27:53.85:671,0,54	1/1:0,18:18:51.15:611,51,0	1/1:0,5:5:12.04:144,12,0
chr10	68543440	.	A	ATGTGTGTG	19197.20	PASS	AB=0.669;AC=40;AF=0.714;AN=56;BaseQRankSum=-3.498;DP=711;FS=0.000;HRun=0;HaplotypeScore=223.7978;InbreedingCoeff=0.7836;MQ=59.88;MQ0=0;MQRankSum=-10.710;QD=40.25;ReadPosRankSum=-2.142;VQSLOD=4.1430;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:45:96.31:0,96,2356	1/1:5,3:8:12.04:491,12,0	0/0:34,0:30:38.59:0,39,844	0/0:38,0:29:48.01:0,48,923	0/0:23,0:23:36.12:0,36,937	1/1:23,4:27:27.04:614,27,0	1/1:23,8:33:39.12:1168,39,0	1/1:23,5:29:37.83:1039,38,0	1/1:13,7:21:39.10:1236,39,0	0/1:17,0:31:99:153,0,149	0/1:6,0:13:46.21:46,0,70	1/1:16,7:23:30.07:1097,30,0	1/1:14,12:26:66.11:2080,66,0	1/1:18,2:21:27.09:955,27,0	1/1:7,7:14:15.05:628,15,0	1/1:6,10:17:33.11:1319,33,0	1/1:18,9:28:48.13:1713,48,0	0/0:30,0:30:63.16:0,63,1526	1/1:28,3:31:59.97:1850,60,0	1/1:10,6:16:14.87:437,15,0	1/1:43,2:45:10.22:73,10,0	1/1:14,4:19:14.93:486,15,0	0/0:21,0:21:51.17:0,51,1239	0/0:43,0:43:99:0,114,2845	1/1:10,3:13:5.62:220,6,0	1/1:27,2:28:60.14:1780,60,0	1/1:15,9:26:51.12:1607,51,0	1/1:7,0:7:11.93:206,12,0
chr10	68543500	.	T	TC	16844.65	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=-4.865;DP=559;FS=10.271;HRun=0;HaplotypeScore=77.8585;InbreedingCoeff=0.9992;MQ=84.35;MQ0=0;MQRankSum=-5.923;QD=42.43;ReadPosRankSum=1.994;VQSLOD=5.0059;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,105,1469	1/1:0,14:14:36.12:575,36,0	0/0:23,0:23:60.19:0,60,813	0/0:25,0:25:75.22:0,75,1000	0/0:11,0:11:33.11:0,33,459	1/1:0,19:19:54.18:862,54,0	1/1:0,32:32:90.31:1438,90,0	1/1:0,18:18:51.17:814,51,0	1/1:1,12:13:39.13:622,39,0	1/1:0,29:29:84.29:1341,84,0	1/1:0,9:9:24.08:384,24,0	1/1:1,24:25:72.24:1141,72,0	1/1:1,12:13:33.11:527,33,0	1/1:1,12:13:39.13:617,39,0	1/1:0,17:17:48.16:767,48,0	1/1:1,16:17:39.13:623,39,0	1/1:0,24:24:72.25:1148,72,0	0/0:20,0:20:57.19:0,57,797	1/1:0,21:21:63.18:980,63,0	1/1:0,10:10:27.09:432,27,0	1/1:0,39:39:72.19:1150,72,0	1/1:1,17:18:36.12:573,36,0	0/0:20,0:20:60.19:0,60,822	0/0:25,0:25:75.19:0,75,1010	1/1:2,11:13:33.11:527,33,0	1/1:1,26:26:78.25:1223,78,0	1/1:0,15:15:36.12:575,36,0	1/1:0,11:11:33.11:527,33,0
chr10	68544116	.	TG	T	15209.36	PASS	AB=0.532;AC=37;AF=0.661;AN=56;BaseQRankSum=15.610;DP=584;FS=2.248;HRun=1;HaplotypeScore=104.6082;InbreedingCoeff=0.9206;MQ=86.28;MQ0=0;MQRankSum=-7.843;QD=39.00;ReadPosRankSum=1.029;VQSLOD=4.9573;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,102,1531	1/1:0,9:9:26.98:331,27,0	0/0:23,0:23:69.20:0,69,1050	0/0:24,0:24:59.37:0,59,913	0/0:20,0:20:60.20:0,60,954	1/1:0,24:24:72.13:956,72,0	1/1:2,27:29:84.04:1048,84,0	1/1:0,41:41:99:1639,120,0	1/1:1,12:13:39.13:543,39,0	0/0:19,0:19:57.19:0,57,890	0/0:13,0:13:39.13:0,39,617	1/1:0,13:13:39.08:520,39,0	1/1:0,15:15:45.15:628,45,0	1/1:2,13:15:42.07:561,42,0	1/1:1,21:22:66.17:893,66,0	1/1:0,17:17:51.17:707,51,0	1/1:1,24:25:75.15:1001,75,0	0/0:15,0:15:45.15:0,45,710	1/1:2,13:16:22.16:575,22,0	1/1:2,21:24:72.13:934,72,0	1/1:0,35:35:99:1294,99,0	1/1:1,15:16:48.01:619,48,0	0/0:17,0:17:51.16:0,51,785	0/0:28,0:28:84.29:0,84,1338	1/1:0,20:20:60.13:813,60,0	0/1:3,22:25:19:885,0,19	1/1:1,19:20:60.16:812,60,0	1/1:6,5:11:33.11:451,33,0
chr10	68544160	.	GA	G	9305.34	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=10.716;DP=559;FS=3.254;HRun=8;HaplotypeScore=97.3206;InbreedingCoeff=0.9962;MQ=81.35;MQ0=0;MQRankSum=-4.675;QD=23.32;ReadPosRankSum=-0.282;VQSLOD=4.8757;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:90.28:0,90,1087	1/1:2,10:12:30.04:290,30,0	0/0:19,0:19:44.71:0,45,477	0/0:18,0:19:34.96:0,35,334	0/0:23,0:23:60.18:0,60,724	1/1:3,20:23:60.08:574,60,0	1/1:5,19:24:60.07:573,60,0	1/1:5,18:23:54.09:521,54,0	1/1:1,19:20:57.09:550,57,0	1/1:3,13:16:36.04:343,36,0	1/1:3,9:12:24.03:232,24,0	1/1:0,14:14:36.06:347,36,0	1/1:5,9:14:33.03:312,33,0	1/1:2,10:12:27.04:261,27,0	1/1:2,21:23:69.10:659,69,0	1/1:3,11:14:33.05:319,33,0	1/1:3,21:24:63.06:600,63,0	0/0:24,1:25:43.24:0,43,803	1/1:4,13:17:39.04:370,39,0	1/1:3,24:27:60.08:574,60,0	1/1:9,21:30:51.04:486,51,0	1/1:4,20:24:54.08:521,54,0	0/0:16,0:16:42.12:0,42,498	0/0:26,0:26:78.24:0,78,940	1/1:1,22:23:69.08:656,69,0	1/1:5,17:22:48.07:463,48,0	1/1:6,14:20:54.05:509,54,0	1/1:0,5:5:15.02:145,15,0
chr10	68544258	.	ATT	A	1226.52	PASS	AB=0.878;AC=17;AF=0.304;AN=56;BaseQRankSum=-8.510;DP=570;FS=18.004;HRun=14;HaplotypeScore=146.2531;InbreedingCoeff=-0.4323;MQ=69.64;MQ0=10;MQRankSum=3.357;QD=3.75;ReadPosRankSum=1.205;VQSLOD=-0.2854;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:66.19:0,66,872	0/1:8,1:9:4.12:4,0,133	0/0:49,0:25:31.32:0,31,267	0/0:22,0:14:0.83:0,1,125	0/0:23,0:25:40.75:0,41,680	0/1:21,4:22:82.51:83,0,261	0/1:15,2:17:99:107,0,190	0/1:26,0:32:12.49:12,0,195	0/1:12,2:14:99:120,0,136	0/0:27,0:29:18.81:0,19,488	0/0:21,0:22:36.13:0,36,431	0/1:11,1:12:55.53:56,0,150	0/1:16,2:18:81.60:82,0,262	0/1:14,3:18:99:113,0,164	0/0:13,0:13:12.15:0,12,243	0/1:9,3:12:73.58:74,0,126	0/1:16,0:13:61.64:62,0,92	0/0:20,0:22:53.62:0,54,677	0/1:17,6:22:99:100,0,215	0/1:16,0:16:3.77:4,0,167	0/1:9,5:14:63.35:97,0,63	0/1:16,4:19:99:167,0,111	0/0:13,0:15:44.43:0,44,497	0/0:5,0:8:22.09:0,22,238	0/1:21,2:24:54.15:54,0,354	0/1:29,4:33:99:185,0,374	0/1:21,2:22:63.27:63,0,214	0/0:16,0:14:32.45:0,32,261
chr10	68544266	.	T	TTTTTG	16988.37	PASS	AB=0.800;AC=41;AF=0.732;AN=56;BaseQRankSum=4.841;DP=581;FS=0.814;HRun=0;HaplotypeScore=136.6687;InbreedingCoeff=0.9102;MQ=58.07;MQ0=12;MQRankSum=-8.577;QD=41.03;ReadPosRankSum=2.196;VQSLOD=5.0110;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:72.15:0,72,1051	1/1:2,5:8:13:494,13,0	0/0:46,0:15:24.66:0,25,293	0/0:24,0:13:13.28:0,13,137	0/0:26,0:26:60.79:0,61,809	1/1:12,13:23:60.08:1281,60,0	1/1:11,4:15:26.45:535,26,0	1/1:18,0:28:53.38:414,53,0	1/1:13,4:17:45:699,45,0	1/1:17,0:36:94.48:788,94,0	1/1:6,0:25:67.37:570,67,0	1/1:8,4:13:38.77:572,39,0	1/1:13,6:19:50.94:858,51,0	1/1:12,6:17:51.06:890,51,0	1/1:3,9:12:36.04:825,36,0	1/1:5,5:10:29.99:584,30,0	0/1:12,4:13:8.52:503,0,9	0/0:20,0:20:56.60:0,57,823	1/1:18,6:24:44.04:840,44,0	1/1:10,7:19:37.24:768,37,0	1/1:9,3:12:32.71:493,33,0	1/1:13,5:18:46.31:805,46,0	0/0:18,0:18:53.42:0,53,622	0/0:9,0:9:25.06:0,25,308	1/1:10,16:27:77.90:1606,78,0	1/1:20,14:34:95.68:1619,96,0	1/1:9,9:18:32.69:1059,33,0	1/1:8,7:14:38.77:787,39,0
chr10	68544292	.	GTT	G	9112.99	PASS	AB=1.000;AC=39;AF=0.696;AN=56;BaseQRankSum=4.463;DP=516;FS=0.367;HRun=9;HaplotypeScore=124.8244;InbreedingCoeff=0.9058;MQ=62.15;MQ0=5;MQRankSum=-6.067;QD=27.12;ReadPosRankSum=1.509;VQSLOD=4.1443;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:69.17:0,69,1012	1/1:2,7:9:21.06:245,21,0	0/0:27,0:14:17.18:0,17,271	0/1:19,0:10:24.76:25,0,128	0/0:23,0:23:69.10:0,69,1022	1/1:3,16:19:42.10:489,42,0	1/1:0,16:16:45.13:524,45,0	1/1:4,19:23:57.16:664,57,0	1/1:2,12:14:36.09:419,36,0	0/0:4,0:32:74.98:0,75,288	0/0:3,0:28:61.81:0,62,261	1/1:1,12:13:36.04:402,36,0	1/1:5,11:16:32.82:384,33,0	1/1:4,10:14:33.08:384,33,0	1/1:3,10:13:30.08:349,30,0	1/1:0,14:14:39.12:454,39,0	1/1:0,18:16:42.12:489,42,0	0/0:22,0:22:60.20:0,60,962	1/1:4,13:17:38.79:454,39,0	1/1:3,16:19:45.12:524,45,0	1/1:2,6:8:12.02:140,12,0	1/1:3,18:21:51.13:594,51,0	0/0:17,0:17:45.15:0,45,739	0/0:6,0:6:15.04:0,15,224	1/1:1,23:24:72.21:837,72,0	1/1:3,24:27:72.19:828,72,0	1/1:5,13:18:39.10:454,39,0	1/1:0,14:14:39.12:454,39,0
chr10	68545170	.	C	CA	15952.15	PASS	AB=0.520;AC=37;AF=0.661;AN=56;BaseQRankSum=12.334;DP=572;FS=10.169;HRun=0;HaplotypeScore=91.0283;InbreedingCoeff=0.9263;MQ=89.99;MQ0=0;MQRankSum=-4.686;QD=43.35;ReadPosRankSum=0.104;VQSLOD=4.4005;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,126,1741	1/1:0,6:6:18.06:288,18,0	0/0:21,0:21:57.05:0,57,727	0/0:25,0:25:57.57:0,58,948	0/0:16,0:16:45.15:0,45,629	1/1:0,13:13:36.12:571,36,0	1/1:0,34:34:93.32:1485,93,0	1/1:1,26:27:78.23:1178,78,0	1/1:0,28:28:78.27:1242,78,0	0/0:19,0:19:51.17:0,51,711	0/0:7,0:7:18.06:0,18,252	1/1:0,16:16:42.14:669,42,0	1/1:0,18:18:54.18:863,54,0	1/1:0,15:15:42.14:669,42,0	1/1:0,25:25:63.21:1006,63,0	1/1:0,20:20:57.19:911,57,0	1/1:0,43:43:99:1869,117,0	0/0:22,0:22:63.21:0,63,881	1/1:1,12:13:35.63:528,36,0	1/1:0,11:11:30.10:479,30,0	1/1:0,28:28:75.26:1188,75,0	1/1:0,10:10:24.08:381,24,0	0/0:14,0:14:36.10:0,36,485	0/0:36,0:35:99:0,108,1457	1/1:0,13:13:39.13:623,39,0	0/1:1,12:13:8.87:421,0,9	1/1:0,22:22:63.21:1004,63,0	1/1:0,13:13:36.12:575,36,0
chr10	68548315	.	CAGG	C	12964.01	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=14.167;DP=588;FS=0.000;HRun=0;HaplotypeScore=108.9011;InbreedingCoeff=0.9903;MQ=84.45;MQ0=0;MQRankSum=-7.193;QD=36.52;ReadPosRankSum=2.535;VQSLOD=5.6547;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,108,2380	1/1:1,10:11:18.06:288,18,0	0/0:22,0:22:57.19:0,57,1087	0/0:24,0:24:66.22:0,66,1326	0/0:28,0:28:72.20:0,72,1462	1/1:2,10:12:21.07:337,21,0	1/1:0,30:30:78.27:1253,78,0	1/1:7,16:23:42.13:649,42,0	1/1:1,20:21:63.21:1012,63,0	0/0:29,0:29:66.21:0,66,1371	0/0:11,0:11:21.06:0,21,418	1/1:1,32:33:90.31:1444,90,0	1/1:1,15:16:42.14:675,42,0	1/1:2,18:20:27.22:719,27,0	1/1:1,29:30:75.26:1202,75,0	1/1:0,16:16:42.14:674,42,0	1/1:1,20:21:51.17:820,51,0	0/0:26,0:26:78.27:0,78,1684	1/1:5,18:23:48.16:762,48,0	1/1:5,8:13:12.04:193,12,0	1/1:0,20:20:39.03:626,39,0	1/1:1,11:12:21.07:337,21,0	0/0:20,0:20:42.13:0,42,884	0/0:33,0:33:96.33:0,96,2097	1/1:2,11:13:24.08:385,24,0	1/1:1,7:8:21.07:337,21,0	1/1:3,21:24:57.19:915,57,0	1/1:0,9:9:21.07:337,21,0
chr10	68548627	.	C	CTT	9115.53	PASS	AB=0.868;AC=42;AF=0.750;AN=56;BaseQRankSum=0.925;DP=636;FS=5.133;HRun=12;HaplotypeScore=91.5189;InbreedingCoeff=0.7583;MQ=73.10;MQ0=0;MQRankSum=-1.498;QD=18.45;ReadPosRankSum=-1.851;VQSLOD=3.8426;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:38,1:41:6.41:6,0,518	1/1:3,10:15:38.59:464,39,0	0/0:15,0:12:5.82:0,6,54	0/0:14,0:12:1.69:0,2,5	0/0:27,0:34:22.71:0,23,440	1/1:3,18:23:41.11:522,41,0	1/1:0,11:12:17.55:219,18,0	0/0:19,0:21:50.43:0,50,429	1/1:4,14:19:35.61:471,36,0	1/1:6,1:27:21.54:190,22,0	0/1:12,0:17:62.30:69,0,62	1/1:3,12:16:17.55:219,18,0	1/1:6,15:26:47.06:539,47,0	1/1:7,23:33:47.56:581,48,0	1/1:6,9:17:24.45:292,24,0	1/1:4,15:20:39.02:502,39,0	1/1:3,23:29:31.87:703,32,0	1/1:5,9:16:23.52:281,24,0	1/1:12,10:25:41.52:434,42,0	1/1:6,22:30:65.50:788,65,0	1/1:9,14:25:30.83:391,31,0	1/1:2,21:27:46.82:569,47,0	0/0:23,0:30:14.75:0,15,347	0/0:27,0:28:74.74:0,75,677	1/1:1,12:13:27.09:379,27,0	1/1:9,20:32:71.64:866,72,0	1/1:11,3:17:31.50:308,31,0	1/1:1,10:12:24.08:323,24,0
chr10	68549776	.	CAGCCATCCGT	C	24186.18	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=16.714;DP=603;FS=0.000;HRun=0;HaplotypeScore=221.8911;InbreedingCoeff=0.9420;MQ=56.90;MQ0=0;MQRankSum=-17.308;QD=67.56;ReadPosRankSum=5.537;VQSLOD=4.4953;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,141,6733	1/1:2,4:6:5.53:197,6,0	0/0:25,0:22:63.20:0,63,2665	0/0:23,0:22:59.94:0,60,2491	0/0:25,0:25:72.23:0,72,3240	1/1:3,13:16:33.11:1087,33,0	1/1:3,16:19:36.12:1185,36,0	1/1:7,7:14:21.07:692,21,0	1/1:1,17:18:39.61:1286,40,0	0/0:26,0:26:72.24:0,72,3399	0/0:14,0:14:39.13:0,39,1606	1/1:3,20:23:0.56:1912,1,0	1/1:3,10:13:30.10:988,30,0	1/1:1,15:16:36.12:1185,36,0	1/1:3,25:28:78.27:2518,78,0	1/1:4,27:31:64.16:2076,64,0	1/1:4,17:21:39.13:1285,39,0	0/0:32,0:32:90.28:0,90,4553	1/1:6,14:20:42.11:1234,42,0	1/1:2,8:10:18.06:593,18,0	1/1:11,13:24:21.07:692,21,0	1/1:3,13:16:33.11:1079,33,0	0/0:22,0:22:60.21:0,60,2947	0/0:26,0:26:78.27:0,78,4075	1/1:4,10:15:30.10:988,30,0	1/1:5,27:32:42.32:2618,42,0	1/1:4,22:26:51.65:1680,52,0	1/1:1,9:10:27.09:890,27,0
chr10	68550130	.	GCTCGCTCTCT	G	5669.43	PASS	AB=1.000;AC=35;AF=0.673;AN=52;BaseQRankSum=-0.790;DP=499;FS=0.459;HRun=0;HaplotypeScore=141.3696;InbreedingCoeff=0.6231;MQ=71.17;MQ0=15;MQRankSum=-3.074;QD=16.92;ReadPosRankSum=1.576;VQSLOD=3.4051;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:66.04:0,66,1968	1/1:0,5:5:6.02:193,6,0	0/0:19,0:14:22.61:0,23,213	0/0:34,0:15:20.07:0,20,168	0/0:18,0:17:50.91:0,51,1055	1/1:15,3:15:32.95:358,33,0	1/1:12,4:16:0.90:146,1,0	0/1:29,0:29:99:245,0,465	1/1:8,2:13:15:194,15,0	0/1:22,0:22:99:226,0,517	0/1:20,0:20:99:205,0,293	./.	1/1:1,12:13:2.62:95,3,0	1/1:2,16:19:5.95:114,6,0	1/1:10,6:22:29.97:308,30,0	1/1:13,1:15:27.02:346,27,0	1/1:2,16:19:9.03:265,9,0	0/0:9,0:9:20.92:0,21,408	1/1:6,11:17:22.10:399,22,0	1/1:5,2:8:17.94:201,18,0	1/1:20,0:19:41.88:335,42,0	1/1:9,0:9:12:124,12,0	0/0:15,0:15:35.73:0,36,1132	0/0:20,0:20:41.20:0,41,801	./.	1/1:17,3:21:56.46:837,56,0	1/1:4,20:23:15.05:482,15,0	1/1:17,3:19:50.71:597,51,0
chr10	68550132	.	TCG	T	4074.18	PASS	AC=38;AF=0.731;AN=52;BaseQRankSum=1.308;DP=502;FS=2.986;HRun=0;HaplotypeScore=93.6259;InbreedingCoeff=0.9013;MQ=67.56;MQ0=23;MQRankSum=-4.718;QD=12.54;ReadPosRankSum=0.457;VQSLOD=3.5634;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:59.31:0,59,680	1/1:5,0:5:5.99:50,6,0	0/0:16,0:11:22.61:0,23,213	0/0:34,0:15:19.18:0,19,166	0/0:24,0:22:44.61:0,45,407	1/1:17,1:14:32.96:293,33,0	1/1:18,0:16:23.92:195,24,0	1/1:29,0:28:49.92:395,50,0	1/1:13,0:13:14.99:126,15,0	1/1:22,0:22:40.70:333,41,0	1/1:20,0:19:33.83:275,34,0	./.	1/1:12,0:12:2.80:26,3,0	1/1:18,0:18:5.94:44,6,0	1/1:22,0:22:29.89:242,30,0	1/1:15,0:13:24.89:212,25,0	1/1:17,0:17:8.97:76,9,0	0/0:9,0:9:15.96:0,16,111	1/1:15,0:14:27.71:227,28,0	1/1:9,0:8:17.89:144,18,0	1/1:18,1:18:41.88:335,42,0	1/1:8,1:9:11.99:100,12,0	0/0:16,0:15:29.87:0,30,347	0/0:26,0:25:36.23:0,36,323	./.	1/1:18,2:20:56.63:526,57,0	1/1:23,0:22:14.96:120,15,0	1/1:21,0:19:41.45:357,41,0
chr10	68550210	.	TGAGAGAGA	T	4097.71	PASS	AB=0.959;AC=33;AF=0.611;AN=54;BaseQRankSum=-1.454;DP=566;FS=38.822;HRun=0;HaplotypeScore=141.7632;InbreedingCoeff=0.6154;MQ=36.65;MQ0=87;MQRankSum=4.692;QD=11.41;ReadPosRankSum=-0.914;VQSLOD=1.0374;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:31:10.84:0,11,991	1/1:7,1:5:5.29:84,5,0	./.	0/0:4,0:2:6.02:0,6,189	0/0:24,0:24:18.06:0,18,672	1/1:19,0:15:7.77:105,8,0	1/1:22,1:22:9:228,9,0	1/1:12,9:18:23.92:506,24,0	0/0:18,13:26:0.47:0,0,1	0/0:14,0:12:27.05:0,27,621	0/0:11,0:9:9.03:0,9,300	1/1:23,0:20:12.01:190,12,0	0/1:15,0:16:17.43:94,0,17	1/1:19,0:15:11.07:206,11,0	1/1:25,1:24:15.99:320,16,0	1/1:28,0:24:21.83:403,22,0	1/1:24,0:15:5.85:131,6,0	0/0:21,0:13:33.11:0,33,857	1/1:8,2:8:6.02:114,6,0	1/1:16,2:17:9.71:179,10,0	0/1:16,0:12:69.33:69,0,102	1/1:21,1:20:9.03:218,9,0	0/0:19,0:14:24.08:0,24,739	0/0:31,0:27:29.69:0,30,809	1/1:9,0:8:6.91:154,7,0	0/1:27,2:24:0.23:507,0,0	1/1:20,1:22:12.43:438,12,0	1/1:19,0:10:5.90:152,6,0
chr10	68550748	.	A	AGTGTGT	3143.73	PASS	AB=0.815;AC=37;AF=0.740;AN=50;BaseQRankSum=-3.731;DP=421;FS=14.100;HRun=0;HaplotypeScore=97.1121;InbreedingCoeff=0.4857;MQ=56.02;MQ0=7;MQRankSum=-0.982;QD=10.77;ReadPosRankSum=-0.411;VQSLOD=1.1808;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:20,0:28:15.93:17,0,16	1/1:7,0:7:2.84:20,3,0	./.	./.	0/0:7,0:13:5.67:0,6,66	1/1:8,4:15:3.01:96,3,0	1/1:10,0:10:6.02:75,6,0	1/1:21,0:20:10.44:181,10,0	1/1:15,0:15:14.06:300,14,0	0/0:9,0:15:10.85:0,11,130	0/0:4,0:11:15.04:0,15,194	1/1:10,0:12:12.03:173,12,0	1/1:5,0:5:3.01:37,3,0	1/1:10,0:10:15.02:247,15,0	1/1:7,3:12:3.01:96,3,0	1/1:13,0:13:18.06:431,18,0	1/1:6,8:21:15.05:366,15,0	0/0:29,0:30:15.93:0,16,285	1/1:17,0:16:9.50:220,10,0	1/1:1,2:4:6.02:134,6,0	1/1:19,0:18:12.02:242,12,0	./.	0/0:9,0:10:17.99:0,18,217	0/1:17,0:21:4.95:5,0,191	1/1:16,0:16:9:175,9,0	1/1:16,0:25:27.84:328,28,0	1/1:15,0:15:8.99:132,9,0	0/1:3,0:6:32.33:32,0,55
chr10	68551145	.	TATTAAA	T	358.70	PASS	AC=8;AF=0.364;AN=22;BaseQRankSum=3.053;DP=86;FS=7.969;HRun=0;HaplotypeScore=42.0945;InbreedingCoeff=0.6785;MQ=93.26;MQ0=8;MQRankSum=-2.738;QD=35.87;ReadPosRankSum=-2.633;VQSLOD=1.5418;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:10:27.09:0,27,982	./.	0/0:7,0:4:3.78:0,4,47	0/0:17,0:10:21.74:0,22,253	0/0:4,0:4:6.02:0,6,220	./.	1/1:1,0:1:3.01:60,3,0	./.	./.	0/0:5,0:5:15.05:0,15,342	./.	./.	./.	./.	./.	./.	1/1:1,0:1:3.01:57,3,0	0/0:20,0:18:54.19:0,54,1856	1/1:4,0:3:9.03:184,9,0	./.	./.	./.	./.	0/0:2,0:2:6.02:0,6,219	./.	./.	./.	1/1:0,4:4:9.03:163,9,0
chr10	68551151	.	A	AT	309.93	PASS	AC=12;AF=0.462;AN=26;BaseQRankSum=4.223;DP=96;FS=11.016;HRun=0;HaplotypeScore=35.3350;InbreedingCoeff=0.6617;MQ=96.58;MQ0=6;MQRankSum=-2.823;QD=17.22;ReadPosRankSum=-3.563;VQSLOD=3.3546;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:11:30.09:0,30,401	./.	0/0:7,0:4:5.18:0,5,61	0/0:20,0:12:8.16:0,8,135	0/0:2,0:2:6.02:0,6,84	./.	1/1:0,1:1:3.01:40,3,0	./.	1/1:1,0:1:3:25,3,0	0/0:4,0:4:12.04:0,12,153	./.	./.	./.	./.	./.	./.	1/1:0,4:4:5.99:63,6,0	0/0:21,0:20:54.09:0,54,727	1/1:2,4:5:15.04:180,15,0	1/1:1,0:1:2.92:17,3,0	./.	./.	./.	0/0:2,0:2:6.02:0,6,84	./.	./.	./.	1/1:5,0:5:9.02:104,9,0
chr10	68551154	.	AAT	A	71.71	PASS	AC=4;AF=0.133;AN=30;BaseQRankSum=-1.776;DP=101;FS=4.486;HRun=0;HaplotypeScore=37.1416;InbreedingCoeff=0.4479;MQ=101.40;MQ0=5;MQRankSum=1.126;QD=14.34;ReadPosRankSum=0.325;VQSLOD=2.7100;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:11:27.09:0,27,438	./.	0/0:7,0:4:2.22:0,2,7	0/0:22,0:14:29.79:0,30,225	0/0:2,0:2:6.02:0,6,99	./.	0/0:1,0:1:2.92:0,3,17	./.	0/0:1,0:1:3:0,3,25	1/1:0,4:4:12.03:138,12,0	1/1:1,0:1:3:26,3,0	./.	./.	./.	./.	./.	0/0:5,0:5:7.70:0,8,38	0/0:22,0:21:56.78:0,57,821	0/0:5,0:5:14.63:0,15,102	0/0:1,0:1:3.01:0,3,34	./.	./.	./.	0/0:2,0:2:6.02:0,6,98	0/0:1,0:1:2.98:0,3,22	./.	./.	0/0:5,0:5:11.20:0,11,65
chr10	68551353	.	AATATATATATAT	A	2951.02	PASS	AC=34;AF=0.810;AN=42;BaseQRankSum=1.037;DP=134;FS=0.000;HRun=0;HaplotypeScore=62.1561;InbreedingCoeff=0.4050;MQ=41.17;MQ0=8;MQRankSum=-0.899;QD=35.55;ReadPosRankSum=1.840;VQSLOD=2.5304;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:12:3.01:0,3,77	1/1:4,0:3:6.02:167,6,0	0/0:7,0:2:3:0,3,28	0/0:27,0:9:14.70:0,15,248	0/0:1,0:1:3.01:0,3,99	1/1:6,0:6:6.02:153,6,0	./.	1/1:18,0:15:3.01:79,3,0	1/1:2,0:2:6.02:128,6,0	1/1:1,0:2:3.01:83,3,0	1/1:0,0:2:6.02:165,6,0	./.	1/1:3,0:2:3.01:84,3,0	1/1:1,0:1:3.01:84,3,0	./.	1/1:2,0:2:3.01:82,3,0	1/1:4,0:4:6.02:153,6,0	1/1:3,6:8:15.05:517,15,0	1/1:10,0:10:15.05:393,15,0	1/1:3,0:3:9.03:236,9,0	./.	./.	./.	./.	1/1:4,0:4:4.57:73,5,0	1/1:1,0:1:3.01:84,3,0	1/1:2,0:2:4.57:87,5,0	1/1:10,0:9:18.95:505,19,0
chr10	68551354	.	AT	A	185.07	PASS	AB=0.804;AC=22;AF=0.458;AN=48;BaseQRankSum=6.226;DP=129;FS=5.356;HRun=1;HaplotypeScore=50.3491;InbreedingCoeff=0.1876;MQ=41.50;MQ0=7;MQRankSum=-3.637;QD=2.20;ReadPosRankSum=4.729;VQSLOD=-0.7577;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:16.29:0,16,172	0/1:2,2:3:8.58:22,0,9	0/0:6,0:2:5.69:0,6,45	0/1:26,1:9:13.75:14,0,61	0/0:1,0:1:3.01:0,3,33	0/1:4,2:6:3.14:3,0,31	./.	0/0:14,1:12:18.50:0,19,124	0/0:1,1:2:0.73:0,1,2	0/0:2,0:2:3.89:0,4,35	0/0:2,0:2:1.36:0,1,3	0/1:1,0:1:0:0,0,0	1/1:2,1:2:3.37:17,3,0	1/1:0,1:1:2.90:16,3,0	0/0:1,0:1:2.50:0,2,9	1/1:1,1:2:2.84:14,3,0	0/1:2,2:4:4.43:11,0,4	0/1:9,0:8:1.19:2,0,1	0/1:6,4:10:34.79:35,0,38	1/1:0,3:3:7.02:33,7,0	1/1:1,0:1:2.99:24,3,0	./.	./.	./.	0/0:3,1:4:6.39:0,6,32	1/1:0,1:1:2.90:16,3,0	0/1:1,1:2:4.89:10,0,5	1/1:4,6:9:5.68:101,6,0
chr10	68551356	.	ATATATATATATATATAT	A	3927.81	PASS	AB=0.838;AC=29;AF=0.630;AN=46;BaseQRankSum=5.263;DP=127;FS=8.534;HRun=0;HaplotypeScore=71.9790;InbreedingCoeff=0.1222;MQ=40.88;MQ0=8;MQRankSum=-3.548;QD=48.49;ReadPosRankSum=4.926;VQSLOD=1.5416;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:18.06:0,18,345	0/1:2,2:3:12.76:245,0,13	0/0:6,0:2:6.02:0,6,74	0/0:28,0:9:14.89:0,15,440	0/0:1,0:1:3.01:0,3,187	0/1:4,2:6:46.37:222,0,46	./.	0/1:13,1:11:95.91:101,0,96	1/1:1,1:2:6.02:227,6,0	0/1:2,0:2:41.85:80,0,42	1/1:2,0:2:6.02:172,6,0	0/1:1,0:1:0:0,0,0	1/1:2,1:2:3.01:127,3,0	1/1:0,1:1:3.01:127,3,0	0/0:1,0:1:2.84:0,3,14	1/1:1,1:2:3.01:126,3,0	1/1:2,2:4:8.06:246,8,0	1/1:10,0:8:5.93:20,6,0	0/1:6,4:10:48.81:602,0,49	1/1:0,3:3:9.03:367,9,0	./.	./.	./.	./.	0/1:3,1:4:23.88:154,0,24	1/1:0,1:1:3.01:127,3,0	1/1:1,1:2:6.02:179,6,0	1/1:4,6:9:8.04:804,8,0
chr10	68551454	.	T	TG	13536.41	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-12.339;DP=429;FS=0.000;HRun=0;HaplotypeScore=42.6501;InbreedingCoeff=0.9947;MQ=67.34;MQ0=3;MQRankSum=-2.625;QD=44.82;ReadPosRankSum=1.644;VQSLOD=4.6929;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:54.18:0,54,753	1/1:0,7:7:21.07:336,21,0	0/0:20,0:17:44.91:0,45,567	0/0:16,0:14:30.09:0,30,402	0/0:11,0:11:33.11:0,33,461	1/1:0,16:16:48.16:767,48,0	1/1:0,16:16:42.14:671,42,0	1/1:0,28:27:78.25:1220,78,0	1/1:0,10:10:24.06:384,24,0	0/0:12,0:12:36.12:0,36,504	0/0:11,0:11:27.09:0,27,377	1/1:0,14:14:42.14:671,42,0	1/1:0,17:17:51.17:815,51,0	1/1:0,12:12:36.12:575,36,0	1/1:0,15:15:45.15:719,45,0	1/1:0,12:12:36.12:575,36,0	1/1:1,29:30:81.07:1294,81,0	0/0:22,0:21:57.19:0,57,784	1/1:2,18:19:54.18:861,54,0	1/1:0,23:23:66.23:1055,66,0	1/1:0,29:29:81.28:1292,81,0	1/1:0,11:11:33.11:527,33,0	0/0:8,0:8:24.08:0,24,336	0/0:7,0:7:21.07:0,21,293	1/1:0,16:16:45.15:719,45,0	1/1:0,9:9:27.09:432,27,0	1/1:0,6:6:15.05:240,15,0	1/1:2,9:11:24.08:383,24,0
chr10	68551842	.	C	CT	15605.62	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-14.104;DP=638;FS=3.308;HRun=3;HaplotypeScore=61.8372;InbreedingCoeff=0.9971;MQ=92.31;MQ0=0;MQRankSum=-5.113;QD=37.33;ReadPosRankSum=2.325;VQSLOD=5.4278;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:81.23:0,81,960	1/1:0,6:6:15.05:210,15,0	0/0:26,0:26:71.93:0,72,786	0/0:30,0:30:85.35:0,85,918	0/0:17,0:17:42.13:0,42,504	1/1:1,21:22:60.20:840,60,0	1/1:1,26:27:63.21:882,63,0	1/1:4,27:31:82.16:1136,82,0	1/1:2,25:27:78.26:1090,78,0	0/0:30,0:30:81.22:0,81,957	0/0:14,0:14:39.12:0,39,468	1/1:1,21:22:60.20:840,60,0	1/1:2,15:17:45.15:630,45,0	1/1:0,24:24:63.21:882,63,0	1/1:2,30:32:84.28:1176,84,0	1/1:1,27:28:75.25:1051,75,0	1/1:1,26:27:75.25:1050,75,0	0/0:24,0:24:69.21:0,69,826	1/1:2,21:23:63.18:841,63,0	1/1:1,20:21:57.19:798,57,0	1/1:1,28:29:81.27:1134,81,0	1/1:2,9:11:24.08:335,24,0	0/0:18,0:18:51.16:0,51,610	0/0:29,0:29:87.27:0,87,1044	1/1:0,14:14:42.14:587,42,0	1/1:1,19:20:54.18:756,54,0	1/1:1,23:24:66.19:903,66,0	1/1:1,12:13:33.11:462,33,0
chr10	68552043	.	TGG	T	800.99	PASS	AB=0.757;AC=6;AF=0.111;AN=54;BaseQRankSum=0.261;DP=307;FS=3.234;HRun=11;HaplotypeScore=55.2287;InbreedingCoeff=0.4134;MQ=77.63;MQ0=1;MQRankSum=-1.111;QD=15.71;ReadPosRankSum=6.634;VQSLOD=1.6118;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:29:33.34:0,33,376	0/0:10,0:10:14.46:0,14,142	0/0:12,0:12:23.18:0,23,249	0/0:16,0:16:23.62:0,24,235	0/1:7,1:8:13.88:14,0,189	0/0:7,0:7:3.89:0,4,28	0/0:17,0:17:24.49:0,24,247	0/0:7,0:9:8.68:0,9,66	0/0:6,0:14:12.49:0,12,130	1/1:3,12:15:30.05:310,30,0	0/1:4,6:9:9.92:55,0,10	0/0:3,0:4:9.87:0,10,79	0/0:3,0:4:8.50:0,9,65	0/0:6,0:6:7.94:0,8,59	0/0:8,0:9:15.64:0,16,114	0/0:10,0:12:22.33:0,22,189	0/0:6,0:11:12.01:0,12,143	1/1:1,16:18:53.87:554,54,0	0/0:6,0:6:8.02:0,8,55	0/0:4,0:5:8.99:0,9,75	0/0:25,0:27:59.13:0,59,508	0/0:6,0:6:12.47:0,12,105	0/0:4,0:5:2.50:0,2,9	0/0:19,1:20:0.84:0,1,254	./.	0/0:6,0:8:8.74:0,9,94	0/0:13,0:13:23.96:0,24,200	0/0:2,0:2:5.99:0,6,50
chr10	68552290	.	GACACAT	G	1163.64	PASS	AB=1.000;AC=33;AF=0.635;AN=52;BaseQRankSum=6.509;DP=352;FS=0.531;HRun=0;HaplotypeScore=83.1063;InbreedingCoeff=0.6001;MQ=66.45;MQ0=10;MQRankSum=-3.652;QD=6.65;ReadPosRankSum=2.999;VQSLOD=1.6325;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:23.98:0,24,462	1/1:5,0:5:2.74:12,3,0	0/0:39,0:14:29.44:0,29,371	0/0:41,0:21:47.09:0,47,541	0/0:13,0:12:33.04:0,33,636	1/1:15,0:15:28.87:213,29,0	1/1:13,0:13:13.72:59,14,0	0/0:23,0:22:60.05:0,60,816	1/1:6,0:6:5.42:23,5,0	0/1:11,0:11:41.38:41,0,73	0/1:10,0:10:74.95:81,0,75	./.	1/1:5,0:5:8.17:34,8,0	1/1:9,0:9:5.42:23,5,0	1/1:7,0:7:10.85:46,11,0	1/1:11,0:11:5.36:23,5,0	1/1:17,1:18:31.56:239,32,0	0/0:12,0:12:26.99:0,27,131	1/1:15,1:16:24.26:213,24,0	./.	1/1:11,0:11:19.55:118,20,0	1/1:4,0:4:2.74:12,3,0	0/0:9,0:9:18.05:0,18,497	0/0:20,0:20:48.10:0,48,1182	1/1:4,0:4:2.74:12,3,0	1/1:14,0:14:25.37:154,25,0	0/1:9,0:9:14.91:15,0,18	1/1:7,0:7:8.71:36,9,0
chr10	68552292	.	CACAT	C	3708.06	PASS	AB=1.000;AC=35;AF=0.673;AN=52;BaseQRankSum=4.160;DP=353;FS=0.000;HRun=0;HaplotypeScore=65.0874;InbreedingCoeff=0.5935;MQ=65.16;MQ0=11;MQRankSum=-2.210;QD=19.72;ReadPosRankSum=3.436;VQSLOD=3.2036;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:23.97:0,24,366	1/1:0,4:4:3.01:57,3,0	0/0:38,0:13:29.44:0,29,346	0/0:41,0:21:47.09:0,47,527	0/0:13,0:12:32.60:0,33,443	1/1:12,4:16:26.37:348,26,0	1/1:1,11:12:15.05:284,15,0	0/0:22,0:21:59.90:0,60,646	1/1:0,6:6:6.02:113,6,0	0/1:11,0:11:13.91:14,0,73	0/1:10,0:10:26.07:26,0,76	./.	1/1:0,5:5:9.03:169,9,0	1/1:1,7:8:6.02:113,6,0	1/1:0,7:7:12.04:226,12,0	1/1:1,10:11:6.02:113,6,0	1/1:11,6:17:35.95:455,36,0	0/1:12,0:12:38.60:119,0,39	1/1:3,14:17:38.78:451,39,0	./.	1/1:10,4:14:30.03:408,30,0	1/1:0,3:3:3.01:57,3,0	0/0:8,0:8:18.03:0,18,367	0/0:20,0:20:48.06:0,48,900	1/1:1,4:5:6.02:91,6,0	1/1:1,13:14:29.61:358,30,0	1/1:1,8:9:6.49:114,6,0	1/1:3,4:7:12.01:192,12,0
chr10	68552296	.	TACACACACACACACAC	T	719.40	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=0.752;DP=351;FS=0.000;HRun=0;HaplotypeScore=131.5000;InbreedingCoeff=0.5300;MQ=57.66;MQ0=12;MQRankSum=-2.405;QD=34.26;ReadPosRankSum=1.317;VQSLOD=2.8454;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:17:20.10:0,20,1100	0/0:4,0:4:3.01:0,3,144	0/0:37,0:12:7.24:0,7,234	0/0:38,0:17:3.48:0,3,229	0/0:12,0:11:30.10:0,30,1647	0/0:15,0:15:21.07:0,21,830	0/0:12,0:12:18.06:0,18,859	0/0:23,0:22:39.13:0,39,1790	0/0:6,0:6:6.02:0,6,282	1/1:4,5:9:11.65:295,12,0	1/1:4,5:9:12.04:532,12,0	0/0:3,0:3:3.01:0,3,117	0/0:7,0:7:12.04:0,12,508	0/0:7,0:7:6.02:0,6,277	0/0:7,0:7:12.04:0,12,561	0/0:11,0:11:6.02:0,6,274	0/0:16,0:16:30.10:0,30,1238	0/0:5,0:14:24.08:0,24,1002	0/0:17,0:17:39.12:0,39,1638	0/1:3,0:2:0:0,0,0	0/0:17,0:17:30.08:0,30,1319	0/0:3,0:3:3.01:0,3,144	0/0:9,0:8:15.05:0,15,1090	0/0:18,0:19:42.14:0,42,2746	0/0:5,0:5:6.02:0,6,253	0/0:14,0:14:20.81:0,21,909	0/0:9,0:9:9.03:0,9,441	0/0:8,0:8:21.07:0,21,948
chr10	68552438	.	C	CTT	1013.50	PASS	AC=4;AF=0.074;AN=54;BaseQRankSum=-1.967;DP=394;FS=19.488;HRun=9;HaplotypeScore=125.7430;InbreedingCoeff=0.5549;MQ=71.59;MQ0=7;MQRankSum=-4.097;QD=25.34;ReadPosRankSum=0.506;VQSLOD=1.7265;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,100,1077	0/0:2,0:2:6.02:0,6,64	0/0:45,0:15:16.24:0,16,167	0/0:53,0:26:4.06:0,4,109	0/0:22,0:22:50.48:0,50,536	0/0:8,0:8:17.30:0,17,117	0/0:4,0:4:8.93:0,9,76	0/0:18,0:18:23.93:0,24,224	0/0:4,0:4:9.02:0,9,95	1/1:4,14:19:46.38:608,46,0	1/1:7,14:19:36.11:525,36,0	0/0:5,0:5:6:0,6,59	0/0:3,0:3:5.98:0,6,52	0/0:7,0:6:11.98:0,12,117	0/0:5,0:5:5.78:0,6,45	0/0:5,0:5:11.22:0,11,52	0/0:8,0:8:14.03:0,14,122	0/0:37,0:37:74.96:0,75,765	0/0:20,0:20:27.72:0,28,322	0/0:3,0:3:2.98:0,3,26	0/0:4,0:4:6.01:0,6,63	./.	0/0:9,0:9:18.01:0,18,182	0/0:8,0:8:15.03:0,15,155	0/0:8,0:8:11.38:0,11,94	0/0:15,0:14:2.43:0,2,121	0/0:9,0:9:17.73:0,18,155	0/0:8,0:8:21.02:0,21,206
chr10	68552441	.	TTTTTTTCC	T	2685.36	PASS	AB=1.000;AC=45;AF=0.833;AN=54;BaseQRankSum=-6.999;DP=385;FS=33.470;HRun=0;HaplotypeScore=146.6784;InbreedingCoeff=-0.1326;MQ=67.92;MQ0=12;MQRankSum=-0.674;QD=7.01;ReadPosRankSum=-2.641;VQSLOD=0.7858;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:40,0:40:99:138,0,1564	1/1:2,0:2:5.93:40,6,0	0/1:50,0:14:14.90:15,0,56	0/1:51,0:23:7.75:8,0,157	0/1:21,0:21:12.46:12,0,871	1/1:5,3:8:15.89:273,16,0	1/1:4,0:4:8.88:58,9,0	1/1:18,0:18:24:216,24,0	1/1:3,0:3:8.97:74,9,0	0/1:19,0:19:2.11:2,0,554	0/1:21,0:19:31.06:31,0,457	1/1:4,0:4:5.96:45,6,0	1/1:2,0:2:6:52,6,0	1/1:7,0:6:11.98:103,12,0	1/1:4,1:5:5.97:94,6,0	1/1:2,3:5:12.03:250,12,0	1/1:8,1:8:13.13:136,13,0	0/1:36,0:35:81.54:82,0,901	1/1:17,2:19:38.71:405,39,0	1/1:1,2:3:2.98:21,3,0	1/1:3,0:3:6:54,6,0	./.	0/1:9,0:9:38.44:38,0,181	0/1:8,0:8:19.03:19,0,243	1/1:8,0:8:14.94:122,15,0	1/1:9,2:10:22.50:283,22,0	1/1:7,1:8:17.90:179,18,0	1/1:8,0:8:11.11:80,11,0
chr10	68552908	.	TAG	T	7173.05	PASS	AB=0.561;AC=37;AF=0.661;AN=56;BaseQRankSum=13.770;DP=431;FS=0.000;HRun=0;HaplotypeScore=83.9861;InbreedingCoeff=0.9066;MQ=84.80;MQ0=0;MQRankSum=-5.105;QD=30.65;ReadPosRankSum=2.807;VQSLOD=6.1683;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:87.30:0,87,1445	1/1:0,4:4:12.04:153,12,0	0/0:31,0:31:63.60:0,64,962	0/0:22,0:22:43.77:0,44,680	0/0:17,0:17:39.12:0,39,626	1/1:2,14:16:39.12:496,39,0	1/1:3,19:22:48.12:594,48,0	1/1:5,12:17:36.11:457,36,0	1/1:1,7:8:21.07:267,21,0	0/0:19,0:19:57.19:0,57,931	0/0:16,0:16:33.10:0,33,524	1/1:0,6:6:18.06:229,18,0	1/1:1,9:10:27.09:343,27,0	1/1:2,6:8:15.05:190,15,0	1/1:2,15:17:45.14:573,45,0	1/1:1,6:7:18.06:229,18,0	1/1:3,17:20:45.14:573,45,0	0/0:20,0:20:42.11:0,42,673	1/1:2,11:13:30.10:382,30,0	1/1:1,9:10:27.09:343,27,0	1/1:2,13:15:27.09:344,27,0	1/1:0,10:10:30.10:382,30,0	0/0:16,0:16:45.15:0,45,749	0/0:24,0:24:72.25:0,72,1204	1/1:0,10:10:30.10:382,30,0	0/1:5,18:23:17:627,0,17	1/1:2,12:14:36.12:457,36,0	1/1:0,4:4:12.04:153,12,0
chr10	68553985	.	C	CG	14326.96	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-16.411;DP=741;FS=4.835;HRun=5;HaplotypeScore=73.4925;InbreedingCoeff=0.9973;MQ=88.33;MQ0=0;MQRankSum=-3.783;QD=32.12;ReadPosRankSum=2.683;VQSLOD=5.6646;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:57:99:0,156,1646	1/1:0,14:14:33.11:433,33,0	0/0:36,0:36:77.31:0,77,825	0/0:25,0:25:54.34:0,54,590	0/0:26,0:26:63.14:0,63,670	1/1:0,22:22:63.20:829,63,0	1/1:3,30:33:75.24:987,75,0	0/0:29,0:29:72.16:0,72,766	1/1:0,33:33:93.30:1223,93,0	0/0:2,0:26:46.43:0,46,137	0/0:2,0:18:31.46:0,31,102	1/1:0,26:26:69.22:908,69,0	1/1:4,18:22:45.15:591,45,0	1/1:3,22:25:51.17:671,51,0	1/1:1,27:28:75.24:985,75,0	1/1:2,24:26:69.22:908,69,0	1/1:1,26:27:66.21:868,66,0	0/0:36,0:36:99:0,108,1138	1/1:1,9:10:25.30:290,25,0	1/1:2,18:20:47.70:560,48,0	1/1:4,46:50:99:1735,132,0	1/1:5,15:20:48.01:581,48,0	0/0:16,0:16:45.03:0,45,458	0/0:25,1:26:32.67:0,33,689	1/1:1,25:26:54.18:709,54,0	1/1:6,19:25:57.10:707,57,0	1/1:1,33:34:87.28:1144,87,0	1/1:0,5:5:15.05:197,15,0
chr10	68554201	.	CT	C	9188.87	PASS	AB=0.913;AC=44;AF=0.786;AN=56;BaseQRankSum=10.589;DP=639;FS=10.413;HRun=10;HaplotypeScore=67.9255;InbreedingCoeff=0.7903;MQ=76.60;MQ0=0;MQRankSum=-1.118;QD=18.83;ReadPosRankSum=1.194;VQSLOD=5.2204;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,136,1462	1/1:1,6:7:14.99:130,15,0	0/1:18,0:19:1.88:2,0,224	0/0:15,0:14:26.93:0,27,269	0/0:19,3:22:1.98:0,2,457	1/1:5,15:20:32.08:375,32,0	1/1:5,27:32:71.97:625,72,0	1/1:3,21:24:62.91:532,63,0	1/1:3,22:25:62.97:547,63,0	1/1:4,20:25:61.99:522,62,0	1/1:3,16:19:38.96:339,39,0	1/1:2,17:19:47.98:417,48,0	1/1:7,21:28:56.98:495,57,0	1/1:4,15:19:41.98:365,42,0	1/1:3,25:29:65.02:553,65,0	1/1:2,18:20:26.60:393,27,0	1/1:3,27:30:71.98:625,72,0	0/0:30,0:30:72.19:0,72,795	1/1:6,11:17:29.97:257,30,0	1/1:2,13:15:35.98:313,36,0	1/1:6,26:33:77.01:657,77,0	1/1:1,14:15:38.99:338,39,0	0/1:12,2:14:12.96:13,0,326	0/0:29,3:32:55.13:0,55,819	1/1:2,10:12:29.99:260,30,0	1/1:4,21:25:59.96:521,60,0	1/1:4,28:32:80.98:703,81,0	1/1:1,8:9:23.99:208,24,0
chr10	68555114	.	AGT	A	203.03	PASS	AB=1.000;AC=24;AF=0.500;AN=48;BaseQRankSum=2.448;DP=651;FS=26.464;HRun=0;HaplotypeScore=114.8967;InbreedingCoeff=0.2470;MQ=60.20;MQ0=76;MQRankSum=-2.779;QD=0.69;ReadPosRankSum=-1.579;VQSLOD=0.5254;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	1/1:11,0:9:0.47:1,0,0	./.	./.	./.	1/1:14,0:10:1.71:12,2,0	0/0:34,0:24:2.97:0,3,20	1/1:26,0:25:0.52:5,1,0	0/0:25,0:22:4.23:0,4,50	0/1:24,0:23:16.47:16,0,22	1/1:16,0:16:5.37:33,5,0	0/0:33,0:30:1.73:0,2,68	0/0:14,0:14:2.97:0,3,20	0/1:26,0:20:1.96:8,0,2	0/1:24,0:19:2.48:2,0,16	1/1:18,0:15:1.55:4,2,0	0/1:27,0:15:5.41:5,0,23	1/1:12,0:19:5.55:28,6,0	0/0:19,0:13:3.06:0,3,8	0/0:10,0:10:2.97:0,3,20	0/0:58,0:45:1.25:0,1,3	0/1:20,0:18:0:0,0,0	1/1:8,1:9:3.01:32,3,0	1/1:19,13:34:18.35:173,18,0	0/1:18,0:15:0.85:2,0,1	0/0:16,0:11:8.21:0,8,44	0/0:10,0:7:1.82:0,2,5	1/1:9,0:6:0.46:1,0,0
chr10	68555122	.	T	TG	3733.92	PASS	AB=0.790;AC=34;AF=0.607;AN=56;BaseQRankSum=1.902;DP=676;FS=10.515;HRun=1;HaplotypeScore=107.3574;InbreedingCoeff=0.5846;MQ=49.98;MQ0=83;MQRankSum=-3.900;QD=8.83;ReadPosRankSum=3.344;VQSLOD=0.4323;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:39:54.15:0,54,669	1/1:4,7:9:6:51,6,0	0/0:46,0:15:39.08:0,39,461	0/0:35,0:8:24.07:0,24,294	0/0:14,0:13:15.03:0,15,177	1/1:16,4:15:9.29:88,9,0	0/1:28,4:23:6.44:315,0,6	0/1:12,18:29:58.33:611,0,58	1/1:7,15:19:17.86:254,18,0	0/0:24,0:23:60.03:0,60,674	0/0:19,0:19:11.81:0,12,121	1/1:7,24:28:29.89:368,30,0	1/1:2,13:14:3.90:47,4,0	1/1:11,19:24:19.47:204,19,0	1/1:9,17:18:8.70:121,9,0	1/1:5,13:15:5.99:62,6,0	1/1:21,6:14:13.02:348,13,0	0/0:24,0:24:48.70:0,49,510	0/1:22,0:15:41.04:294,0,41	1/1:4,5:9:8.05:90,8,0	1/1:22,29:37:5.68:38,6,0	1/1:21,2:19:20.74:280,21,0	0/0:11,0:10:21:0,21,245	0/0:39,0:39:59.75:0,60,641	1/1:9,13:18:10.47:103,10,0	0/1:8,10:12:76.82:274,0,77	1/1:2,5:4:5.99:61,6,0	1/1:5,3:5:9.03:124,9,0
chr10	68555123	.	GT	G	3461.27	PASS	AB=0.811;AC=34;AF=0.607;AN=56;BaseQRankSum=3.099;DP=664;FS=9.319;HRun=1;HaplotypeScore=106.4085;InbreedingCoeff=0.5685;MQ=47.85;MQ0=84;MQRankSum=-2.486;QD=8.38;ReadPosRankSum=4.787;VQSLOD=0.6051;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:40:63.16:0,63,768	1/1:9,2:9:6.02:82,6,0	0/0:44,0:13:39.08:0,39,461	0/0:35,0:8:24.07:0,24,294	0/0:14,0:13:15.05:0,15,190	1/1:11,8:15:8.75:140,9,0	0/1:12,20:22:6.49:291,0,6	0/1:29,0:28:99:574,0,100	1/1:18,2:17:16.22:167,16,0	0/0:24,0:23:61.98:0,62,719	0/0:19,0:19:10.88:0,11,97	1/1:29,1:27:28.49:251,28,0	1/1:15,0:14:2.98:21,3,0	1/1:25,3:22:17.87:210,18,0	1/1:25,2:19:8.61:97,9,0	1/1:15,2:15:5.91:60,6,0	1/1:11,17:14:12.82:313,13,0	0/0:24,0:24:48.78:0,49,553	0/1:9,13:15:37.05:344,0,37	1/1:9,0:9:7.24:65,7,0	1/1:39,9:34:6.01:69,6,0	1/1:10,13:19:20.58:280,21,0	0/0:10,0:9:20.28:0,20,235	0/0:39,0:39:60.71:0,61,617	1/1:19,2:17:10.62:116,11,0	0/1:17,0:12:76.90:223,0,77	1/1:6,0:4:2.97:40,3,0	1/1:6,2:5:9.03:117,9,0
chr10	68555162	.	TGTGTGC	T	2778.93	PASS	AB=0.942;AC=30;AF=0.536;AN=56;BaseQRankSum=12.069;DP=523;FS=10.534;HRun=0;HaplotypeScore=169.6694;InbreedingCoeff=-0.1272;MQ=50.78;MQ0=30;MQRankSum=-5.068;QD=7.05;ReadPosRankSum=2.084;VQSLOD=1.9018;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:40:68.53:0,69,481	1/1:8,0:7:11.93:110,12,0	0/0:13,0:6:16.28:0,16,77	0/1:7,0:7:4.84:11,0,5	0/1:13,0:11:10.01:10,0,66	1/1:23,0:22:15.32:175,15,0	0/1:23,0:20:24.45:76,0,24	1/1:19,0:19:11.54:210,12,0	0/1:21,0:20:32.67:194,0,33	0/1:7,17:23:16.68:440,0,17	0/1:3,15:18:5.99:91,0,6	0/1:26,0:26:97.69:98,0,152	0/1:13,0:13:16.05:136,0,16	0/1:27,0:24:19.68:168,0,20	0/1:24,0:19:22.44:141,0,22	1/1:12,0:11:17.82:131,18,0	0/1:15,0:13:15.39:148,0,15	0/0:27,0:27:11.08:0,11,315	0/1:19,0:14:6.15:189,0,6	0/1:8,0:8:27.30:64,0,27	1/1:31,0:23:14.89:111,15,0	1/1:12,0:10:2.63:20,3,0	0/0:6,0:5:11.94:0,12,134	0/0:42,0:42:76.49:0,76,795	0/1:17,0:16:8.78:91,0,9	0/1:18,0:16:62.39:180,0,62	0/1:6,0:6:7.37:82,0,7	1/1:9,0:7:8.98:79,9,0
chr10	68555166	.	TGCGCGC	T	8967.75	PASS	AB=1.000;AC=41;AF=0.732;AN=56;BaseQRankSum=8.002;DP=502;FS=0.000;HRun=0;HaplotypeScore=149.8698;InbreedingCoeff=0.6783;MQ=55.68;MQ0=18;MQRankSum=-6.607;QD=25.62;ReadPosRankSum=0.194;VQSLOD=4.5600;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:81.19:0,81,1657	1/1:2,5:7:15.05:336,15,0	0/0:16,0:9:20.06:0,20,215	0/1:7,0:7:35.63:36,0,101	0/0:12,0:11:14.92:0,15,251	1/1:14,8:21:27.01:567,27,0	1/1:15,5:19:15.02:317,15,0	1/1:4,12:16:35.96:728,36,0	1/1:12,6:18:36.09:748,36,0	0/1:23,0:22:27.15:27,0,198	0/1:18,0:18:37.43:37,0,45	1/1:15,7:25:23.87:483,24,0	1/1:8,4:12:24.05:511,24,0	1/1:13,10:23:23.81:524,24,0	1/1:18,4:19:19.34:479,19,0	1/1:6,6:11:18.06:401,18,0	1/1:11,3:11:23.87:492,24,0	0/0:28,0:28:51.26:0,51,1245	1/1:9,9:14:33.11:699,33,0	1/1:5,3:8:11.89:252,12,0	1/1:22,3:21:18.06:372,18,0	1/1:8,4:11:6.02:140,6,0	0/0:7,0:6:15.05:0,15,346	0/0:46,0:46:90.31:0,90,2087	1/1:11,7:17:21.54:466,22,0	1/1:12,3:14:36.02:826,36,0	1/1:4,1:5:15.05:329,15,0	1/1:3,5:7:9.03:197,9,0
chr10	68555169	.	GCGCGCA	G	6345.46	PASS	AB=1.000;AC=38;AF=0.679;AN=56;BaseQRankSum=10.836;DP=452;FS=0.474;HRun=0;HaplotypeScore=150.7538;InbreedingCoeff=0.7916;MQ=60.30;MQ0=14;MQRankSum=-6.222;QD=23.68;ReadPosRankSum=1.314;VQSLOD=4.3828;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:96.27:0,96,2545	1/1:7,0:7:15.05:233,15,0	0/0:18,0:11:28.85:0,29,407	0/0:6,1:7:3.67:0,4,175	0/0:12,0:11:18.06:0,18,431	1/1:16,1:16:26.65:411,27,0	1/1:16,0:16:15.01:207,15,0	1/1:12,0:12:36.12:487,36,0	1/1:15,0:15:39.13:580,39,0	0/0:23,0:22:27.07:0,27,582	0/1:18,0:18:20.29:20,0,74	1/1:21,0:21:30.15:365,30,0	1/1:11,0:11:27.08:374,27,0	1/1:17,1:18:23.95:409,24,0	1/1:16,1:14:22.32:346,22,0	1/1:11,0:10:18.06:281,18,0	1/1:12,0:10:24.08:341,24,0	0/0:28,0:28:68.42:0,68,1788	1/1:15,0:12:33.10:474,33,0	1/1:7,0:7:11.93:166,12,0	1/1:20,0:16:21.07:292,21,0	1/1:9,0:7:6.02:90,6,0	0/0:8,0:7:18.06:0,18,505	0/0:42,0:42:90.31:0,90,2588	1/1:15,1:15:21.54:318,22,0	1/1:12,0:12:36.12:536,36,0	1/1:7,0:7:21.06:288,21,0	0/1:7,0:6:6.96:128,0,7
chr10	68558604	.	T	TTCAGGAACTC	43982.46	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=-5.351;DP=499;FS=2.679;HRun=0;HaplotypeScore=134.9807;InbreedingCoeff=0.9790;MQ=82.91;MQ0=0;MQRankSum=-15.924;QD=126.75;ReadPosRankSum=1.638;VQSLOD=5.6167;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:90.31:0,90,3077	1/1:0,7:7:21.07:1150,21,0	0/0:25,0:25:60.40:0,60,1923	0/0:18,0:18:45.06:0,45,1079	0/0:14,0:14:42.14:0,42,1285	1/1:4,11:18:45.15:2215,45,0	1/1:11,12:27:66.23:3206,66,0	1/1:12,10:25:66.22:3105,66,0	1/1:3,9:12:33.11:1740,33,0	1/1:5,0:19:54.19:2495,54,0	1/1:4,0:10:24.08:1063,24,0	1/1:3,19:25:66.23:3533,66,0	1/1:1,10:14:33.11:1737,33,0	1/1:6,10:17:45.15:2254,45,0	1/1:3,14:18:48.16:2533,48,0	1/1:2,7:10:27.09:1479,27,0	1/1:9,4:13:25.71:1261,26,0	0/0:19,0:19:57.18:0,57,1884	1/1:3,8:14:42.13:1809,42,0	1/1:2,14:17:51.13:2448,51,0	1/1:6,5:16:30.10:1549,30,0	1/1:2,8:13:24.08:1267,24,0	0/0:14,0:14:42.14:0,42,1445	0/0:30,0:30:87.30:0,87,2986	1/1:2,17:19:57.20:3019,57,0	1/1:4,14:22:63.21:2935,63,0	1/1:4,14:24:54.19:2873,54,0	1/1:1,1:7:6.02:310,6,0
chr10	68559292	.	GAA	G	17133.75	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=6.195;DP=703;FS=6.479;HRun=6;HaplotypeScore=96.7116;InbreedingCoeff=1.0000;MQ=84.47;MQ0=0;MQRankSum=-5.619;QD=35.04;ReadPosRankSum=2.926;VQSLOD=4.3261;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,126,2270	1/1:1,19:20:45.14:600,45,0	0/0:24,0:24:53.26:0,53,887	0/0:18,0:18:47.72:0,48,668	0/0:22,0:22:60.19:0,60,1042	1/1:2,28:30:78.25:1040,78,0	1/1:0,29:29:84.28:1121,84,0	1/1:1,29:30:87.27:1145,87,0	1/1:0,26:26:72.24:961,72,0	0/0:30,0:30:75.22:0,75,1265	0/0:13,0:13:39.13:0,39,702	1/1:3,32:35:87.28:1161,87,0	1/1:1,29:30:69.23:920,69,0	1/1:2,18:20:48.16:640,48,0	1/1:0,28:28:72.24:961,72,0	1/1:3,17:20:51.16:680,51,0	1/1:1,25:26:57.19:760,57,0	0/0:16,0:16:42.14:0,42,743	1/1:2,18:20:51.14:661,51,0	1/1:0,24:24:69.23:920,69,0	1/1:1,42:43:99:1601,120,0	1/1:0,20:20:57.19:760,57,0	0/0:18,0:18:54.17:0,54,944	0/0:29,0:29:78.27:0,78,1401	1/1:1,16:17:45.15:600,45,0	1/1:1,24:25:69.22:920,69,0	1/1:3,27:30:78.25:1041,78,0	1/1:0,16:16:48.16:640,48,0
chr10	68560120	.	C	CA	10858.53	PASS	AB=0.597;AC=40;AF=0.714;AN=56;BaseQRankSum=-9.376;DP=690;FS=1.561;HRun=10;HaplotypeScore=72.3226;InbreedingCoeff=0.7784;MQ=69.19;MQ0=0;MQRankSum=-1.936;QD=21.17;ReadPosRankSum=-0.845;VQSLOD=5.4394;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,1:39:56.88:0,57,655	1/1:2,6:8:15.04:157,15,0	0/0:14,0:11:7.62:0,8,106	0/0:11,0:13:10.12:0,10,100	0/0:19,0:20:37.94:0,38,298	1/1:4,27:32:78.03:814,78,0	1/1:6,18:24:29.49:519,29,0	1/1:4,18:22:32.47:535,32,0	1/1:6,23:29:41.52:647,42,0	1/1:11,5:36:71.27:432,71,0	1/1:2,1:24:54.46:300,54,0	1/1:2,24:26:63.16:672,63,0	1/1:4,10:15:32.92:333,33,0	1/1:5,20:25:10.83:515,11,0	0/1:8,15:23:23.55:368,0,24	1/1:3,21:25:31.66:577,32,0	1/1:6,19:26:7.80:477,8,0	0/0:28,0:29:73.93:0,74,597	1/1:4,28:32:84.21:893,84,0	1/1:5,20:25:63.13:658,63,0	1/1:7,20:27:35.51:583,36,0	1/1:5,22:28:13.70:541,14,0	0/0:24,0:24:56.92:0,57,465	0/0:34,2:36:59.91:0,60,685	1/1:8,14:22:17.29:373,17,0	1/1:5,27:32:55.49:748,55,0	1/1:3,19:22:29.49:519,29,0	0/1:3,7:10:22.22:197,0,22
chr10	68560734	.	GGAGAGGCAGAGAGGCAGAGAGGCAGAGAGGCAGAGAGGCAGAGAGAGAGGCA	G	7091.49	PASS	AB=1.000;AC=34;AF=0.607;AN=56;BaseQRankSum=2.642;DP=602;FS=1.537;HRun=0;HaplotypeScore=667.5855;InbreedingCoeff=0.7534;MQ=69.86;MQ0=14;MQRankSum=-3.068;QD=21.89;ReadPosRankSum=3.947;VQSLOD=-0.2761;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:42:75.06:0,75,2560	1/1:6,0:6:6.02:152,6,0	0/0:32,0:19:27.06:0,27,368	0/0:36,0:25:16.57:0,17,285	0/0:19,0:19:33.07:0,33,1698	1/1:11,0:11:8.96:103,9,0	1/1:24,0:22:32.80:597,33,0	1/1:20,0:20:14.99:191,15,0	1/1:19,0:17:27.04:696,27,0	0/0:28,0:33:41.77:0,42,823	0/0:11,0:14:2.94:0,3,18	0/1:13,0:13:18.43:368,0,18	1/1:19,0:19:32.90:618,33,0	1/1:22,0:22:30.09:784,30,0	1/1:15,0:15:18.02:279,18,0	1/1:14,0:13:21.01:326,21,0	1/1:30,0:29:30.02:554,30,0	0/0:24,0:22:29.95:0,30,424	1/1:18,7:23:18.03:563,18,0	1/1:6,8:14:11.90:99,12,0	1/1:36,0:35:48.98:867,49,0	0/0:11,5:15:2.84:0,3,52	0/0:16,0:16:21.91:0,22,459	0/0:45,0:44:99:0,102,4950	1/1:13,0:13:11.93:101,12,0	0/1:20,0:18:22.92:359,0,23	1/1:17,0:17:11.98:207,12,0	1/1:6,0:5:15.03:229,15,0
chr10	68560773	.	CAGAG	C	1596.78	PASS	AB=0.973;AC=29;AF=0.558;AN=52;BaseQRankSum=9.004;DP=380;FS=2.564;HRun=0;HaplotypeScore=87.5579;InbreedingCoeff=0.3709;MQ=40.07;MQ0=63;MQRankSum=-6.707;QD=8.32;ReadPosRankSum=-1.905;VQSLOD=2.2663;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:28:53.30:0,53,1271	1/1:3,0:3:3.01:54,3,0	0/0:15,0:2:0:0,0,0	0/0:19,0:5:2.68:0,3,11	0/0:17,0:16:30.10:0,30,689	0/1:7,0:4:0:0,0,0	1/1:17,0:12:8.86:126,9,0	0/0:13,0:8:16.09:0,16,298	1/1:10,0:6:12.04:217,12,0	0/1:18,0:17:5.32:5,0,563	0/0:9,0:7:6.02:0,6,128	1/1:7,0:6:3.44:154,3,0	1/1:7,0:5:8.86:158,9,0	1/1:11,0:10:15.01:237,15,0	1/1:12,0:9:3.01:54,3,0	1/1:6,0:4:3.01:54,3,0	0/1:11,0:8:50.35:109,0,50	0/1:13,4:16:99:223,0,421	1/1:14,0:7:9.03:155,9,0	./.	1/1:26,0:16:3.01:54,3,0	0/1:10,0:6:0:0,0,0	0/0:9,0:9:13.44:0,13,305	0/0:48,0:47:99:0,108,2358	./.	0/1:8,0:7:96.61:97,0,124	1/1:2,0:2:3.01:54,3,0	0/1:4,0:2:0:0,0,0
chr10	68560779	.	GAGA	G	798.28	PASS	AB=0.909;AC=28;AF=0.538;AN=52;BaseQRankSum=8.333;DP=320;FS=2.693;HRun=0;HaplotypeScore=71.0421;InbreedingCoeff=0.4353;MQ=39.72;MQ0=64;MQRankSum=-7.390;QD=6.44;ReadPosRankSum=-2.720;VQSLOD=1.3204;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:25:62.06:0,62,1395	1/1:0,2:2:3.01:31,3,0	0/0:9,0:1:0:0,0,0	0/0:11,0:1:3.01:0,3,43	0/0:16,0:15:30.10:0,30,711	1/1:7,1:5:2.80:13,3,0	1/1:10,3:7:8.86:81,9,0	0/0:17,0:7:19.88:0,20,400	1/1:4,3:4:12.03:128,12,0	0/0:19,0:17:47.60:0,48,864	0/0:10,0:8:6.49:0,6,149	1/1:4,2:4:2.99:89,3,0	1/1:3,3:5:9.49:91,9,0	1/1:1,6:6:14.99:145,15,0	1/1:9,2:7:3.01:31,3,0	1/1:2,1:1:3.01:32,3,0	0/1:5,1:4:61.43:65,0,61	0/1:15,0:14:50.25:50,0,522	1/1:13,0:7:9.01:90,9,0	./.	1/1:14,2:6:3.48:32,3,0	0/0:9,0:5:0:0,0,0	0/0:6,0:6:14.95:0,15,334	0/0:47,0:46:99:0,115,2588	./.	0/1:5,2:5:50.96:51,0,126	1/1:0,2:2:3.01:31,3,0	0/1:2,0:1:0:0,0,0
chr10	68560797	.	GAGGC	G	221.97	PASS	AB=0.884;AC=6;AF=0.120;AN=50;BaseQRankSum=5.086;DP=378;FS=0.000;HRun=0;HaplotypeScore=92.8112;InbreedingCoeff=-0.1869;MQ=41.86;MQ0=57;MQRankSum=-3.260;QD=3.17;ReadPosRankSum=-0.680;VQSLOD=1.1490;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:30:81.24:0,81,1849	0/0:3,1:4:5.83:0,6,120	./.	0/0:8,0:1:3.01:0,3,61	0/0:10,0:9:21.07:0,21,552	0/0:8,0:7:9.03:0,9,160	0/0:20,0:15:28.91:0,29,481	0/0:23,0:13:36.12:0,36,641	0/1:7,1:7:70.15:70,0,200	0/0:25,0:21:58.78:0,59,1313	0/0:6,0:6:6.02:0,6,165	0/1:8,2:10:99:124,0,213	0/1:4,2:6:23.32:23,0,130	0/1:8,2:8:20.37:20,0,226	0/0:17,0:12:21.07:0,21,393	0/0:5,1:5:12:0,12,201	0/1:16,0:14:14.99:15,0,417	0/0:17,0:16:39.05:0,39,771	0/1:20,0:10:87.07:87,0,180	0/0:16,0:13:3.48:0,3,55	0/0:28,0:20:32.90:0,33,517	0/0:12,0:11:3.01:0,3,58	0/0:5,0:4:8.82:0,9,242	0/0:43,1:43:99:0,99,2353	./.	0/0:9,0:6:15.05:0,15,308	0/0:4,0:4:6.02:0,6,121	./.
chr10	68560971	.	A	ATG	5739.93	PASS	AB=0.857;AC=35;AF=0.625;AN=56;BaseQRankSum=-1.982;DP=489;FS=21.783;HRun=0;HaplotypeScore=125.2870;InbreedingCoeff=0.8320;MQ=67.45;MQ0=2;MQRankSum=-5.680;QD=24.96;ReadPosRankSum=-4.008;VQSLOD=3.1370;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,126,1699	1/1:0,7:7:6.02:80,6,0	0/0:31,0:20:36.06:0,36,523	0/0:34,0:24:57.89:0,58,718	0/0:19,0:19:54.18:0,54,733	1/1:8,9:16:27.09:411,27,0	1/1:12,10:22:39.12:591,39,0	1/1:18,5:22:48.16:787,48,0	1/1:6,5:11:8.27:179,8,0	0/0:23,0:23:66.17:0,66,865	0/0:23,0:23:69.21:0,69,920	1/1:7,5:13:12.02:171,12,0	1/1:7,10:17:27.09:382,27,0	1/1:7,5:12:12.04:193,12,0	1/1:4,4:8:15.05:224,15,0	1/1:8,5:13:18.05:267,18,0	1/1:5,5:10:20.98:258,21,0	0/0:19,0:19:48.15:0,48,624	1/1:8,2:10:9.92:147,10,0	1/1:6,4:10:24.08:352,24,0	0/0:2,14:15:0.85:0,1,2	1/1:2,10:12:11.69:162,12,0	0/0:22,0:22:60.20:0,60,821	0/0:23,1:24:63.68:0,64,867	1/1:1,7:8:5.71:83,6,0	0/1:5,1:6:22.98:231,0,23	1/1:10,9:19:48.12:671,48,0	1/1:6,6:12:36.12:551,36,0
chr10	68560990	.	CAGAGAGAGAGG	C	1821.30	PASS	AB=0.965;AC=17;AF=0.304;AN=56;BaseQRankSum=10.330;DP=640;FS=22.775;HRun=0;HaplotypeScore=272.5340;InbreedingCoeff=0.0239;MQ=56.19;MQ0=5;MQRankSum=-7.245;QD=6.50;ReadPosRankSum=2.184;VQSLOD=1.1854;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,151,7351	0/1:11,0:11:2.50:150,0,2	0/0:40,0:19:47.96:0,48,2000	0/0:51,0:35:53.29:0,53,2306	0/0:22,0:22:63.20:0,63,3317	1/1:23,0:22:4.64:189,5,0	0/1:17,1:18:43.07:66,0,43	0/0:17,0:15:30.03:0,30,388	0/1:30,0:30:64.03:64,0,64	0/0:30,0:27:81.25:0,81,2300	0/0:25,0:25:75.22:0,75,2563	0/1:27,0:26:45.90:46,0,108	0/1:20,0:20:40.01:244,0,40	0/0:17,0:17:1.36:0,1,3	0/1:16,1:17:21.45:192,0,21	0/1:15,0:14:0.57:2,0,1	0/1:20,0:20:16.64:41,0,17	0/0:24,0:24:63.19:0,63,2084	0/1:10,0:10:39.59:40,0,244	1/1:14,2:16:8.03:272,8,0	0/0:20,0:18:3.80:0,4,18	0/1:18,3:20:1.32:132,0,1	0/0:24,0:24:66.19:0,66,3253	0/0:29,0:29:73.93:0,74,3560	0/1:15,3:18:2.34:131,0,2	0/0:8,0:8:20.95:0,21,260	0/1:16,1:17:99:167,0,203	0/1:16,0:16:90.68:245,0,91
chr10	68560993	.	AGAGAGAG	A	4452.44	PASS	AB=0.964;AC=34;AF=0.607;AN=56;BaseQRankSum=12.884;DP=569;FS=22.821;HRun=0;HaplotypeScore=206.7414;InbreedingCoeff=0.6289;MQ=60.16;MQ0=10;MQRankSum=-13.217;QD=16.55;ReadPosRankSum=-5.652;VQSLOD=1.4141;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,150,5404	1/1:5,2:7:18.02:231,18,0	0/0:39,0:18:30.10:0,30,1399	0/0:53,0:39:54.43:0,54,1831	0/0:23,0:23:63.22:0,63,2445	1/1:19,1:19:18.06:293,18,0	1/1:10,0:10:4.74:178,5,0	0/1:12,0:11:17.54:51,0,18	1/1:25,0:25:43.91:522,44,0	0/0:29,0:26:77.10:0,77,1226	0/0:25,0:24:66.22:0,66,1285	1/1:22,0:20:6.30:260,6,0	1/1:11,1:12:27.34:396,27,0	1/1:11,1:12:5.84:52,6,0	1/1:15,0:15:12.73:292,13,0	1/1:10,0:9:12.03:135,12,0	1/1:15,1:16:14.08:171,14,0	0/0:23,0:23:50.96:0,51,1085	0/1:9,0:9:27.17:116,0,27	1/1:14,1:15:30.95:426,31,0	1/1:17,0:15:6.32:54,6,0	1/1:16,0:14:21.50:335,22,0	0/0:25,0:25:69.24:0,69,2610	0/0:29,0:29:74.90:0,75,2633	1/1:16,1:16:20.77:274,21,0	0/1:9,0:8:28.53:60,0,29	0/1:10,2:12:67.96:271,0,68	1/1:13,0:13:17.26:335,17,0
chr10	68560997	.	AGAG	A	5400.58	PASS	AB=1.000;AC=40;AF=0.714;AN=56;BaseQRankSum=13.900;DP=587;FS=12.791;HRun=0;HaplotypeScore=177.7846;InbreedingCoeff=0.7559;MQ=57.54;MQ0=11;MQRankSum=-13.342;QD=15.79;ReadPosRankSum=-5.392;VQSLOD=2.0422;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:56:99:0,162,3378	1/1:8,0:8:18.05:212,18,0	0/0:37,0:15:23.73:0,24,786	0/0:52,0:34:35.10:0,35,1011	0/0:24,0:24:66.23:0,66,1465	1/1:20,1:20:18.05:224,18,0	1/1:13,1:14:24.50:266,24,0	1/1:17,0:16:42.08:460,42,0	1/1:25,2:27:47.99:540,48,0	0/1:28,0:25:99:156,0,101	0/1:24,0:23:18.52:19,0,141	1/1:24,0:22:33.61:363,34,0	1/1:11,1:12:29.77:324,30,0	1/1:13,0:13:8.83:87,9,0	1/1:14,2:16:20.51:297,21,0	1/1:9,0:8:12.03:135,12,0	1/1:15,0:15:17.10:150,17,0	0/0:22,0:22:23.29:0,23,157	1/1:9,0:9:26.42:261,26,0	1/1:15,0:15:30.56:357,31,0	1/1:18,0:16:5.58:71,6,0	1/1:19,0:17:20.92:301,21,0	0/0:24,0:24:69.24:0,69,1545	0/0:28,0:28:72.23:0,72,1554	1/1:18,0:17:24.06:276,24,0	1/1:9,0:8:21.06:255,21,0	1/1:13,0:12:1.65:277,2,0	1/1:9,4:13:33.07:370,33,0
chr10	68560999	.	AG	A	7219.16	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=12.662;DP=593;FS=5.201;HRun=2;HaplotypeScore=160.9537;InbreedingCoeff=0.9498;MQ=59.52;MQ0=12;MQRankSum=-9.509;QD=19.51;ReadPosRankSum=-1.694;VQSLOD=4.1149;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:56:99:0,162,2246	1/1:8,0:8:18.05:212,18,0	0/0:36,0:14:22.29:0,22,534	0/0:55,1:37:29.15:0,29,689	0/0:24,0:24:66.22:0,66,981	1/1:20,1:20:18.03:192,18,0	1/1:15,0:14:23.75:246,24,0	1/1:18,0:17:41.43:332,41,0	1/1:28,0:28:44.21:532,44,0	1/1:1,25:24:72.22:918,72,0	1/1:1,23:23:69.22:895,69,0	1/1:24,0:22:33.01:340,33,0	1/1:11,0:12:29.93:265,30,0	1/1:14,0:14:8.90:87,9,0	1/1:16,0:16:26.13:307,26,0	1/1:9,0:8:12.03:135,12,0	1/1:13,1:14:18:175,18,0	1/1:4,18:22:53.76:640,54,0	1/1:9,0:9:26.76:241,27,0	1/1:16,0:16:30.05:335,30,0	1/1:17,2:17:5.58:53,6,0	1/1:19,0:17:24.40:310,24,0	0/0:24,0:24:69.23:0,69,1026	0/0:27,0:27:69.20:0,69,1024	1/1:18,0:17:24.07:276,24,0	1/1:9,1:9:20.78:152,21,0	1/1:14,0:13:18.14:255,18,0	1/1:13,1:14:32.76:322,33,0
chr10	68561000	.	GGAA	G	7544.28	PASS	AB=0.779;AC=38;AF=0.679;AN=56;BaseQRankSum=11.231;DP=590;FS=24.339;HRun=0;HaplotypeScore=172.0330;InbreedingCoeff=0.8291;MQ=60.52;MQ0=12;MQRankSum=-12.564;QD=23.43;ReadPosRankSum=-2.160;VQSLOD=2.7195;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:56:99:0,165,3691	1/1:3,5:8:18.06:280,18,0	0/0:36,0:14:10.41:0,10,841	0/0:52,1:38:30.74:0,31,1124	0/0:24,0:24:69.20:0,69,1600	1/1:5,14:20:18.06:278,18,0	1/1:2,11:14:23.19:389,23,0	1/1:0,16:16:48.12:793,48,0	1/1:2,26:28:50.78:825,51,0	0/1:25,0:23:6.18:6,0,233	0/0:23,0:23:41.59:0,42,337	1/1:2,21:22:27.08:532,27,0	1/1:4,7:12:30.04:430,30,0	1/1:2,12:14:3.13:131,3,0	1/1:3,12:16:16.75:397,17,0	1/1:1,8:8:12.04:207,12,0	1/1:4,10:14:14.91:219,15,0	0/0:19,0:22:9.13:0,9,274	1/1:1,7:9:27.08:423,27,0	1/1:4,12:16:25.41:454,25,0	0/1:4,15:17:1.13:98,0,1	1/1:4,13:17:14.87:413,15,0	0/0:24,0:24:69.24:0,69,1674	0/0:26,0:26:73.09:0,73,1705	1/1:4,13:17:22.85:380,23,0	1/1:1,9:9:24.07:412,24,0	1/1:4,9:13:21.18:406,21,0	1/1:5,9:14:33.06:470,33,0
chr10	68561001	.	G	GC	506.05	PASS	AB=0.979;AC=23;AF=0.411;AN=56;BaseQRankSum=10.727;DP=591;FS=2.675;HRun=0;HaplotypeScore=184.4324;InbreedingCoeff=0.3476;MQ=61.43;MQ0=12;MQRankSum=-6.981;QD=2.03;ReadPosRankSum=3.095;VQSLOD=2.9740;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:56:99:0,162,2110	1/1:8,0:8:4.32:36,4,0	0/0:37,0:15:28.61:0,29,513	0/0:53,0:38:64.83:0,65,773	0/0:24,0:24:66.22:0,66,919	1/1:21,0:20:5.25:66,5,0	0/1:15,0:14:12.23:12,0,20	0/0:17,0:16:23.65:0,24,91	0/1:28,0:28:7.73:8,0,42	0/0:26,0:23:62.64:0,63,246	0/0:24,0:23:59.49:0,59,227	0/1:23,1:22:8.65:9,0,26	1/1:12,0:12:4.25:96,4,0	0/0:13,1:14:1.95:0,2,13	1/1:16,0:16:6.33:78,6,0	0/0:8,1:8:0.47:0,0,3	1/1:12,2:14:9.61:86,10,0	0/1:21,1:22:19.82:20,0,95	0/1:9,0:9:3.89:30,0,4	1/1:16,0:16:5.49:71,5,0	0/0:17,2:17:2.31:0,2,8	1/1:18,0:17:4.67:41,5,0	0/0:24,0:24:69.21:0,69,944	0/0:25,1:26:69.23:0,69,964	1/1:18,0:17:0.32:31,0,0	0/0:10,0:9:14.57:0,15,45	0/1:13,1:13:4.33:71,0,4	0/1:14,0:14:2.63:22,0,3
chr10	68562695	.	G	GGC	135.27	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-0.238;DP=273;FS=1.806;HRun=0;HaplotypeScore=43.4432;InbreedingCoeff=0.7126;MQ=79.85;MQ0=0;MQRankSum=0.042;QD=12.30;ReadPosRankSum=-1.319;VQSLOD=2.5299;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:17:41.97:0,42,403	0/0:1,0:1:3:0,3,27	0/0:5,0:5:4.93:0,5,80	0/0:15,0:14:29.67:0,30,245	0/0:5,0:5:14.87:0,15,112	0/0:7,0:7:18:0,18,154	0/0:19,0:19:45.46:0,45,471	0/0:5,0:5:5.68:0,6,38	0/0:16,0:16:44.94:0,45,448	1/1:1,4:6:14.93:179,15,0	1/1:4,1:5:8.94:66,9,0	0/0:13,0:13:33.03:0,33,345	0/0:12,0:12:30.03:0,30,349	0/0:7,0:7:20.80:0,21,206	0/0:9,0:9:21.01:0,21,221	0/0:13,0:13:32.97:0,33,332	0/0:21,0:21:44.99:0,45,486	0/0:9,0:9:20.67:0,21,189	0/0:8,0:8:14.90:0,15,128	0/0:4,0:4:11.98:0,12,112	0/0:25,0:25:62.93:0,63,591	0/0:5,0:5:11.99:0,12,114	0/0:4,0:4:9.02:0,9,105	0/0:9,0:9:24.02:0,24,273	0/0:9,0:9:26.76:0,27,272	0/0:9,0:9:18.02:0,18,209	0/0:7,0:7:17.85:0,18,147	0/0:7,0:7:20.99:0,21,202
chr10	68564673	.	AGTGT	A	17052.78	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=8.871;DP=733;FS=7.678;HRun=0;HaplotypeScore=123.8821;InbreedingCoeff=0.9065;MQ=57.29;MQ0=13;MQRankSum=-1.174;QD=31.23;ReadPosRankSum=0.801;VQSLOD=4.4509;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:56.74:0,57,1194	1/1:4,11:15:18.06:304,18,0	0/0:57,0:7:5.91:0,6,80	0/0:36,0:12:3.01:0,3,37	0/0:22,0:22:57.20:0,57,1410	1/1:5,21:26:48.16:810,48,0	1/1:4,23:27:54.18:910,54,0	1/1:12,0:34:4.65:352,5,0	1/1:4,27:31:69.24:1162,69,0	1/1:5,28:32:81.20:1238,81,0	1/1:3,24:27:51.17:860,51,0	1/1:6,20:25:48.16:810,48,0	1/1:3,23:26:60.21:1011,60,0	1/1:11,15:26:36.12:607,36,0	1/1:4,30:35:78.26:1293,78,0	1/1:5,26:31:66.21:1088,66,0	1/1:2,14:16:36.12:607,36,0	1/1:2,16:17:33.11:554,33,0	1/1:8,25:32:65.35:1015,65,0	1/1:2,21:26:57.16:893,57,0	1/1:7,17:25:33.11:557,33,0	1/1:1,11:12:27.09:453,27,0	0/0:21,0:23:62.63:0,63,1331	0/0:22,0:22:48.14:0,48,1093	1/1:4,17:21:42.14:708,42,0	1/1:7,17:25:54.16:860,54,0	1/1:6,19:26:45.15:759,45,0	1/1:0,6:6:12.04:202,12,0
chr10	68565232	.	T	TG	239.43	PASS	AB=1.000;AC=19;AF=0.864;AN=22;DP=78;FS=0.000;HRun=0;HaplotypeScore=13.0629;InbreedingCoeff=0.1761;MQ=47.89;MQ0=0;QD=6.30;VQSLOD=2.8383;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	./.	1/1:3,0:2:2.04:6,2,0	./.	./.	./.	./.	1/1:3,0:3:9.01:82,9,0	./.	0/1:5,0:5:0:0,0,0	1/1:1,0:1:2.99:24,3,0	./.	./.	1/1:1,0:1:2.99:24,3,0	./.	./.	./.	0/0:2,0:2:0.47:0,0,1	./.	1/1:8,0:8:2.97:20,3,0	1/1:5,0:5:8.95:67,9,0	./.	1/1:3,1:4:2.97:20,3,0	./.	./.	1/1:5,0:5:2.99:24,3,0	./.	1/1:2,0:2:5.96:44,6,0
chr10	68566618	.	AC	A	4083.03	PASS	AB=0.986;AC=42;AF=0.778;AN=54;BaseQRankSum=3.729;DP=406;FS=9.425;HRun=13;HaplotypeScore=79.8767;InbreedingCoeff=0.7030;MQ=75.58;MQ0=19;MQRankSum=-2.694;QD=12.01;ReadPosRankSum=5.913;VQSLOD=2.8582;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:8:3.46:0,3,23	1/1:2,3:5:8.94:66,9,0	0/0:29,1:17:8.63:0,9,184	0/1:33,0:23:7.07:7,0,201	0/0:7,0:7:3:0,3,29	1/1:3,9:12:26.45:185,26,0	1/1:1,13:15:38.78:284,39,0	1/1:12,3:16:2.39:19,2,0	1/1:3,9:11:29.35:202,29,0	0/1:7,0:6:0.04:0,0,0	0/0:8,0:8:8.97:0,9,70	1/1:7,8:15:23.83:174,24,0	1/1:1,9:9:23.86:175,24,0	1/1:3,12:15:35.78:262,36,0	1/1:3,12:13:35.78:261,36,0	1/1:2,6:8:17.87:130,18,0	1/1:8,27:33:62.62:459,63,0	1/1:4,11:17:35.71:248,36,0	1/1:3,4:9:16.82:105,17,0	1/1:1,13:10:13.91:180,14,0	1/1:10,31:36:67.43:477,67,0	1/1:3,9:11:29.44:207,29,0	./.	0/0:10,0:9:10.98:0,11,57	1/1:6,6:10:17.50:120,18,0	1/1:3,9:9:23.86:175,24,0	1/1:5,10:16:35.23:241,35,0	1/1:0,5:5:14.91:109,15,0
chr10	68567598	.	AACCCAG	A	5155.86	PASS	AC=34;AF=0.630;AN=54;BaseQRankSum=3.702;DP=220;FS=27.889;HRun=0;HaplotypeScore=70.4094;InbreedingCoeff=0.8496;MQ=70.56;MQ0=0;MQRankSum=-5.727;QD=43.33;ReadPosRankSum=3.746;VQSLOD=2.6075;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:9:15.36:0,15,510	1/1:0,5:5:9.03:191,9,0	0/0:5,0:5:15.04:0,15,297	0/0:7,0:7:15.05:0,15,314	0/0:23,0:23:62.34:0,62,1773	1/1:0,9:9:15.05:369,15,0	1/1:0,5:5:9.03:221,9,0	0/0:13,0:12:33.11:0,33,910	1/1:0,4:4:3.01:74,3,0	0/0:10,0:10:30.10:0,30,830	0/0:9,0:8:24.08:0,24,609	1/1:0,3:3:6.02:148,6,0	1/1:0,7:7:12.04:295,12,0	1/1:0,8:8:15.05:369,15,0	1/1:0,9:9:12.04:295,12,0	1/1:0,7:7:12.04:295,12,0	1/1:0,7:7:6.02:147,6,0	0/0:5,0:5:8.04:0,8,322	1/1:0,4:4:9.03:208,9,0	1/1:0,12:12:30.07:685,30,0	./.	1/1:0,9:9:20.99:408,21,0	0/0:11,0:10:30.10:0,30,792	0/0:8,0:8:11.25:0,11,247	1/1:0,6:6:9.03:221,9,0	1/1:0,7:7:18.05:380,18,0	1/1:0,13:13:30.10:738,30,0	1/1:0,4:4:6.02:112,6,0
chr10	68568811	.	C	CT	2532.48	PASS	AB=0.769;AC=30;AF=0.536;AN=56;BaseQRankSum=-3.139;DP=565;FS=5.985;HRun=15;HaplotypeScore=76.2502;InbreedingCoeff=-0.2953;MQ=68.41;MQ0=4;MQRankSum=0.095;QD=5.30;ReadPosRankSum=-0.513;VQSLOD=2.3243;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:44,2:46:34.01:34,0,224	0/1:8,5:14:9.36:88,0,9	0/0:19,0:10:12.04:0,12,62	0/0:18,0:10:5.57:0,6,54	0/1:24,2:26:7.58:8,0,175	0/1:5,14:19:6.01:279,0,6	1/1:7,20:29:5.61:244,6,0	0/1:30,0:30:23.22:23,0,183	0/1:6,8:14:16.80:80,0,17	0/0:9,0:17:22.19:0,22,73	0/1:14,0:17:13.86:14,0,33	0/1:7,9:16:12.52:105,0,13	0/1:5,6:12:19.86:81,0,20	0/1:16,3:19:21.70:145,0,22	0/1:15,2:17:21.08:114,0,21	1/1:1,12:13:29.97:252,30,0	0/1:28,9:40:34.43:309,0,34	0/1:6,16:23:12.19:117,0,12	1/1:16,13:29:5.68:283,6,0	1/1:7,8:16:14.71:101,15,0	0/1:1,0:4:8.35:8,0,12	1/1:5,4:10:2.16:45,2,0	0/1:21,1:24:2.82:3,0,193	0/0:32,0:32:56.06:0,56,388	0/1:5,8:13:16.79:83,0,17	0/1:19,3:22:52.92:125,0,53	0/1:4,8:12:15.04:105,0,15	1/1:2,10:12:5.99:50,6,0
chr10	68569224	.	C	CTT	344.36	PASS	AB=0.730;AC=2;AF=0.036;AN=56;BaseQRankSum=7.948;DP=756;FS=2.714;HRun=2;HaplotypeScore=110.4050;InbreedingCoeff=-0.0371;MQ=63.57;MQ0=12;MQRankSum=-5.748;QD=7.65;ReadPosRankSum=1.118;VQSLOD=0.6467;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,108,1681	0/0:12,0:12:36.12:0,36,587	0/0:45,0:20:36.48:0,36,636	0/0:54,0:22:28.54:0,29,323	0/0:18,0:18:54.13:0,54,765	0/0:24,0:24:72.22:0,72,1122	0/0:27,0:27:81.26:0,81,1289	0/0:26,0:26:63.13:0,63,892	0/0:27,0:27:78.24:0,78,1218	0/1:16,11:27:99:374,0,107	0/1:12,6:18:59.56:60,0,182	0/0:24,0:24:72.25:0,72,1166	0/0:28,0:28:78.25:0,78,1230	0/0:16,0:16:45.15:0,45,733	0/0:32,0:31:93.31:0,93,1487	0/0:17,0:17:51.14:0,51,777	0/0:26,0:25:75.09:0,75,1187	0/0:31,0:31:90.16:0,90,1347	0/0:12,0:12:33.10:0,33,516	0/0:25,0:25:65.91:0,66,1016	0/0:42,0:42:99:0,120,1955	0/0:19,0:19:57.10:0,57,867	0/0:20,0:20:57.13:0,57,865	0/0:48,0:48:99:0,115,1908	0/0:30,0:30:87.21:0,87,1349	0/0:28,2:30:25.49:0,25,1305	0/0:24,0:24:72.23:0,72,1146	0/0:18,0:18:54.13:0,54,850
chr10	68569225	.	C	CCTCTTCT	2127.87	PASS	AB=0.799;AC=3;AF=0.054;AN=56;BaseQRankSum=7.449;DP=752;FS=0.000;HRun=0;HaplotypeScore=174.0362;InbreedingCoeff=-0.0567;MQ=62.95;MQ0=11;MQRankSum=-6.733;QD=28.37;ReadPosRankSum=0.130;VQSLOD=2.8040;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,108,2474	0/0:12,0:12:36.11:0,36,893	0/0:44,0:20:49.17:0,49,830	0/0:50,0:20:24.96:0,25,426	0/0:17,0:17:50.98:0,51,976	0/0:24,0:24:72.22:0,72,1754	0/0:30,0:30:81.23:0,81,1853	0/0:25,0:25:63.98:0,64,1105	0/0:25,0:25:75.20:0,75,1829	0/1:16,11:27:68.51:1524,0,69	0/1:12,6:18:99:600,0,102	0/0:24,0:24:72.25:0,72,1912	0/0:27,0:27:75.22:0,75,1859	0/0:16,0:16:45.15:0,45,1147	0/0:33,0:32:93.28:0,93,2226	0/0:17,0:17:48.12:0,48,1135	0/0:26,0:25:75.13:0,75,1823	0/0:32,0:32:90.16:0,90,2029	0/0:12,0:12:30.09:0,30,702	0/0:25,0:25:64.93:0,65,1477	0/0:42,0:42:99:0,123,3053	0/0:19,0:19:57.13:0,57,1409	0/0:18,0:18:54.16:0,54,1329	0/0:49,0:49:99:0,128,2761	0/0:29,0:29:84.20:0,84,1983	0/1:28,2:30:99:104,0,2176	0/0:24,0:24:72.21:0,72,1783	0/0:18,0:18:54.18:0,54,1341
chr10	68569236	.	C	CCTCTTCTTC	3599.50	PASS	AB=0.904;AC=5;AF=0.089;AN=56;BaseQRankSum=-0.646;DP=749;FS=0.579;HRun=0;HaplotypeScore=189.2041;InbreedingCoeff=0.3313;MQ=60.50;MQ0=17;MQRankSum=-7.437;QD=26.86;ReadPosRankSum=-1.161;VQSLOD=2.8801;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:60.61:0,61,2080	0/0:12,0:12:30.09:0,30,789	0/1:46,0:14:25.40:25,0,299	0/0:51,0:13:7.37:0,7,129	0/0:18,0:18:42.04:0,42,891	0/0:21,0:21:58.05:0,58,1447	0/0:32,0:32:66.19:0,66,1577	0/0:24,0:24:38.95:0,39,493	0/0:26,0:26:66.15:0,66,1617	0/1:21,11:33:17.30:2249,0,17	1/1:22,0:22:45.05:1131,45,0	0/0:22,0:22:66.23:0,66,1836	0/0:28,0:28:63.18:0,63,1649	0/0:15,0:15:33.11:0,33,928	0/0:29,0:28:75.23:0,75,1934	0/0:17,0:17:45.11:0,45,1063	0/0:27,0:26:63.17:0,63,1618	0/0:35,0:35:81.13:0,81,1898	0/0:11,0:11:21.06:0,21,475	0/0:22,0:21:45.13:0,45,1116	0/0:42,0:42:91.83:0,92,2719	0/0:20,0:20:57.12:0,57,1379	0/0:18,0:18:48.14:0,48,1234	0/0:44,0:44:99:0,101,2372	0/0:26,0:26:75.17:0,75,1873	0/1:32,0:32:99:194,0,2040	0/0:25,0:25:63.18:0,63,1609	0/0:13,0:13:39.13:0,39,1002
chr10	68569839	.	T	TCTTCCTTC	8817.15	PASS	AB=1.000;AC=38;AF=0.731;AN=52;BaseQRankSum=2.077;DP=577;FS=6.740;HRun=0;HaplotypeScore=138.3526;InbreedingCoeff=0.7020;MQ=63.49;MQ0=6;MQRankSum=-6.996;QD=20.18;ReadPosRankSum=-1.923;VQSLOD=3.1846;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:44.34:0,44,892	1/1:6,0:6:9.03:255,9,0	./.	./.	0/0:16,0:16:36.09:0,36,682	1/1:10,6:15:18.06:636,18,0	1/1:28,9:37:3.01:121,3,0	0/1:39,0:38:39.56:150,0,40	1/1:7,8:19:12.04:488,12,0	0/0:20,0:20:36.12:0,36,863	1/1:4,0:23:44.51:353,45,0	1/1:6,3:11:9.01:269,9,0	1/1:5,8:13:9.03:367,9,0	1/1:10,5:15:18.06:566,18,0	1/1:13,6:20:18.06:664,18,0	1/1:20,7:28:18.06:671,18,0	1/1:12,8:21:11.96:351,12,0	0/0:4,0:6:10.85:0,11,161	1/1:28,0:27:21.05:362,21,0	1/1:25,1:26:24.92:535,25,0	1/1:32,0:32:18.03:364,18,0	1/1:13,6:20:9.03:345,9,0	0/0:13,0:13:24.07:0,24,480	0/0:26,0:26:42.14:0,42,1037	1/1:11,5:17:12.04:488,12,0	0/1:21,0:21:50.48:468,0,50	1/1:13,0:21:33.11:1032,33,0	1/1:18,0:22:12.02:332,12,0
chr10	68570429	.	G	GT	412.98	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.135;DP=581;FS=5.197;HRun=8;HaplotypeScore=65.3365;InbreedingCoeff=0.9860;MQ=65.56;MQ0=3;MQRankSum=0.405;QD=19.67;ReadPosRankSum=-2.954;VQSLOD=2.6978;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,102,1129	0/0:8,0:8:21.06:0,21,238	0/0:19,0:12:26.78:0,27,263	0/0:25,0:19:17.91:0,18,306	0/0:23,0:23:66.19:0,66,748	0/0:14,0:14:39.11:0,39,442	0/0:22,0:22:57.12:0,57,624	1/1:8,13:21:38.29:508,38,0	0/0:26,0:26:78.20:0,78,869	0/0:14,0:14:39:0,39,423	0/0:19,0:19:54.11:0,54,585	0/0:25,0:25:75.20:0,75,840	0/0:16,0:16:45.13:0,45,508	0/0:17,0:17:42.08:0,42,467	0/0:18,0:18:54.15:0,54,612	0/0:15,0:15:45.13:0,45,510	0/0:37,0:37:99:0,111,1245	0/0:14,0:14:36.09:0,36,397	0/0:30,0:30:83.83:0,84,928	0/0:25,0:25:72.19:0,72,806	0/0:16,0:16:48.14:0,48,544	0/0:12,0:12:33.09:0,33,374	0/0:14,0:14:36.10:0,36,408	0/0:24,0:24:63.16:0,63,704	0/0:27,0:27:75.67:0,76,840	0/0:18,0:18:54.15:0,54,612	0/0:30,0:28:87.16:0,87,958	0/0:14,0:14:42.12:0,42,476
chr10	68571686	.	ATTTGT	A	2288.67	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=7.675;DP=763;FS=6.646;HRun=0;HaplotypeScore=156.0052;InbreedingCoeff=0.9813;MQ=67.80;MQ0=2;MQRankSum=5.718;QD=23.12;ReadPosRankSum=-2.136;VQSLOD=2.3979;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:85.60:0,86,2351	0/0:16,0:16:33.07:0,33,660	0/0:28,0:21:12.04:0,12,339	0/0:42,0:31:25.60:0,26,427	0/0:31,0:31:63.20:0,63,1709	0/0:17,0:17:42.14:0,42,962	0/0:27,0:27:38.62:0,39,778	1/1:26,12:38:36.12:622,36,0	0/0:33,0:33:69.21:0,69,1357	1/1:17,25:43:75.25:1317,75,0	1/1:9,9:18:27.09:493,27,0	0/0:27,0:27:51.17:0,51,1113	0/0:23,0:23:60.17:0,60,1349	0/0:26,0:26:57.19:0,57,1234	0/0:19,0:22:48.16:0,48,1018	0/0:18,0:18:45.15:0,45,1040	0/0:24,0:31:28.34:0,28,547	0/0:13,0:16:21.03:0,21,413	0/0:29,0:29:27.09:0,27,660	0/0:25,0:25:60.20:0,60,1254	0/0:11,0:11:15.94:0,16,280	0/0:23,0:28:42.08:0,42,708	0/0:16,0:16:42.14:0,42,1124	0/0:33,0:33:66.16:0,66,1682	0/0:29,0:33:54.19:0,54,1214	0/0:32,0:32:66.23:0,66,1610	0/0:38,0:41:87.30:0,87,1994	0/0:17,0:17:30.09:0,30,701
chr10	68572145	.	TTTTC	T	1459.27	PASS	AB=0.815;AC=6;AF=0.107;AN=56;BaseQRankSum=5.848;DP=356;FS=5.483;HRun=0;HaplotypeScore=78.7663;InbreedingCoeff=0.4641;MQ=67.30;MQ0=3;MQRankSum=-6.558;QD=27.02;ReadPosRankSum=-1.208;VQSLOD=2.8873;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:57.20:0,57,1362	0/0:6,0:6:18.06:0,18,442	0/0:30,0:18:9.99:0,10,233	0/0:20,0:9:9:0,9,77	0/0:24,0:24:69.17:0,69,1358	0/0:13,0:13:24.08:0,24,567	0/0:2,0:2:6:0,6,97	0/1:7,10:15:26.27:434,0,26	0/0:4,0:4:9.03:0,9,218	1/1:6,10:16:42.08:635,42,0	1/1:4,10:14:35.98:509,36,0	0/0:4,0:3:9:0,9,123	0/0:5,0:5:15.05:0,15,355	0/0:10,0:10:27.02:0,27,540	0/1:7,0:7:14.81:15,0,121	0/0:6,0:6:15.05:0,15,315	0/0:17,0:17:42.14:0,42,991	0/0:14,0:14:32.12:0,32,878	0/0:19,0:19:54.18:0,54,1200	0/0:22,0:22:60.11:0,60,1235	0/0:5,0:5:12.04:0,12,294	0/0:2,0:2:6.02:0,6,147	0/0:2,0:2:3.01:0,3,74	0/0:3,0:3:6.02:0,6,132	0/0:24,0:24:63.21:0,63,1448	0/0:13,0:12:36.11:0,36,782	0/0:12,0:12:24.08:0,24,561	0/0:24,0:24:72.21:0,72,1626
chr10	68574108	.	TTTGTCTTGTTTC	T	4397.13	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=8.379;DP=415;FS=15.863;HRun=0;HaplotypeScore=156.1881;InbreedingCoeff=0.9727;MQ=72.52;MQ0=2;MQRankSum=-4.914;QD=70.92;ReadPosRankSum=-0.026;VQSLOD=3.8287;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,99,5892	0/0:11,0:11:29.95:0,30,1469	0/0:16,0:15:39.13:0,39,1831	0/0:21,0:18:30.78:0,31,1617	0/0:20,0:20:60.18:0,60,3313	0/0:16,0:16:48.16:0,48,2973	0/0:20,0:20:51.17:0,51,2839	1/1:0,24:24:71.84:1963,72,0	0/0:3,0:3:9.03:0,9,558	1/1:1,15:15:45.04:1170,45,0	1/1:1,9:10:20.44:694,20,0	0/0:8,0:8:24:0,24,1169	0/0:10,0:10:30.10:0,30,1789	0/0:7,0:7:21.07:0,21,1301	0/0:16,0:16:39.13:0,39,2312	0/0:12,0:12:36.12:0,36,2117	0/0:15,0:15:24.15:0,24,2217	1/1:1,11:12:15.05:570,15,0	0/0:19,0:19:48.16:0,48,2818	0/0:16,0:16:42.14:0,42,2589	0/0:8,0:8:17.30:0,17,1057	0/0:14,0:14:36.12:0,36,2079	0/0:19,0:19:57.20:0,57,3327	0/0:12,0:12:36.12:0,36,2226	0/0:10,0:10:30.10:0,30,1658	0/0:16,0:16:45.11:0,45,2232	0/0:17,0:17:48.06:0,48,2759	0/0:11,0:11:33.11:0,33,2046
chr10	68574221	.	AC	A	943.50	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.399;DP=631;FS=11.331;HRun=2;HaplotypeScore=59.6292;InbreedingCoeff=0.9982;MQ=58.96;MQ0=0;MQRankSum=-1.741;QD=30.44;ReadPosRankSum=-2.943;VQSLOD=1.4017;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:54:99:0,163,2378	0/0:11,0:11:33.11:0,33,494	0/0:23,0:22:66.17:0,66,921	0/0:19,0:19:54.16:0,54,751	0/0:22,0:22:66.22:0,66,984	0/0:26,0:26:78.25:0,78,1142	0/0:25,0:25:72.24:0,72,1077	1/1:4,27:31:81.25:1038,81,0	0/0:14,0:14:36.08:0,36,506	0/0:36,0:36:93.30:0,93,1357	0/0:13,0:13:39.11:0,39,563	0/0:11,0:11:27.09:0,27,404	0/0:18,0:18:54.18:0,54,800	0/0:11,0:11:33.11:0,33,494	0/0:15,0:15:42.14:0,42,629	0/0:15,0:15:45.11:0,45,648	0/0:34,0:34:99:0,99,1440	0/0:22,0:22:66.18:0,66,957	0/0:25,0:25:72.22:0,72,1029	0/0:25,0:25:69.23:0,69,1029	0/0:23,0:23:66.22:0,66,988	0/0:23,0:23:63.20:0,63,922	0/0:17,0:17:51.16:0,51,743	0/0:28,0:28:84.28:0,84,1258	0/0:18,0:18:54.18:0,54,808	0/0:24,0:24:66.22:0,66,986	0/0:33,0:33:96.24:0,96,1367	0/0:14,0:14:39.13:0,39,581
chr10	68574529	.	T	TA	3651.04	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=10.045;DP=527;FS=12.455;HRun=11;HaplotypeScore=109.5128;InbreedingCoeff=0.9438;MQ=61.25;MQ0=1;MQRankSum=-3.668;QD=9.17;ReadPosRankSum=2.321;VQSLOD=1.3255;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:73.26:0,73,661	1/1:10,0:10:24.69:109,25,0	0/0:26,2:21:22.71:0,23,172	0/0:15,1:12:11.53:0,12,105	0/0:21,1:22:35.29:0,35,453	1/1:10,0:11:20.89:104,21,0	1/1:16,0:18:27.79:145,28,0	1/1:13,4:19:36.40:211,36,0	1/1:17,0:18:35.53:157,36,0	1/1:14,0:23:48.29:267,48,0	1/1:1,0:7:6.47:28,6,0	1/1:18,0:18:36.02:165,36,0	1/1:8,0:8:11.01:49,11,0	1/1:15,0:17:26.31:130,26,0	1/1:27,0:27:46.59:206,47,0	1/1:7,0:7:13.66:60,14,0	1/1:31,0:33:53.64:253,54,0	1/1:4,25:28:42.90:616,43,0	1/1:13,0:13:17.41:74,17,0	1/1:33,0:33:45.58:236,46,0	1/1:10,0:9:9.58:51,10,0	1/1:19,0:22:15.09:119,15,0	0/0:12,0:12:26.89:0,27,209	0/0:15,0:15:35.82:0,36,279	1/1:16,0:16:34.38:155,34,0	1/1:21,0:22:40.17:191,40,0	1/1:26,0:26:49.64:227,50,0	1/1:9,0:9:22.01:99,22,0
chr10	68574537	.	A	AAAG	13497.42	PASS	AB=0.889;AC=37;AF=0.661;AN=56;BaseQRankSum=-7.661;DP=515;FS=42.664;HRun=0;HaplotypeScore=89.0695;InbreedingCoeff=0.7599;MQ=63.97;MQ0=1;MQRankSum=0.318;QD=41.03;ReadPosRankSum=4.621;VQSLOD=3.5913;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,102,1414	1/1:0,10:11:27.08:520,27,0	0/0:29,0:20:26.58:0,27,427	0/0:23,0:16:9.07:0,9,211	0/0:22,0:22:65.88:0,66,911	1/1:2,7:11:30.08:552,30,0	1/1:9,12:20:60.13:1003,60,0	0/0:24,0:23:5.97:0,6,276	1/1:4,10:15:45.06:807,45,0	0/1:24,0:24:6.03:6,0,286	0/1:6,0:6:22.95:23,0,43	1/1:3,12:16:9.36:635,9,0	0/1:3,2:6:4.90:229,0,5	1/1:8,8:16:25.20:682,25,0	1/1:0,22:23:51.17:1028,51,0	1/1:1,4:6:18.05:313,18,0	1/1:6,19:26:69.05:1278,69,0	0/0:27,0:26:59.24:0,59,284	1/1:4,13:17:31.46:617,31,0	1/1:4,23:27:72.11:1311,72,0	1/1:5,5:10:26.94:363,27,0	1/1:11,10:22:60.02:910,60,0	0/0:10,0:10:30.09:0,30,429	0/0:14,0:14:42.11:0,42,589	1/1:6,12:18:43.13:757,43,0	1/1:9,12:22:59.61:957,60,0	1/1:2,18:21:32.23:989,32,0	1/1:3,8:11:27.06:517,27,0
chr10	68574609	.	TG	T	6224.64	PASS	AB=0.543;AC=35;AF=0.625;AN=56;BaseQRankSum=10.154;DP=400;FS=76.163;HRun=7;HaplotypeScore=79.1110;InbreedingCoeff=0.8451;MQ=69.93;MQ0=1;MQRankSum=-2.929;QD=22.15;ReadPosRankSum=2.492;VQSLOD=-0.2117;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:72.19:0,72,877	1/1:1,2:3:5.83:61,6,0	0/0:11,0:8:17.84:0,18,194	0/0:10,0:10:12.44:0,12,154	0/0:19,0:19:39.12:0,39,491	1/1:2,8:10:18.04:184,18,0	1/1:3,16:18:48.09:483,48,0	0/0:10,0:10:17.99:0,18,184	1/1:6,15:21:48.90:483,49,0	0/0:18,0:18:48.15:0,48,604	0/0:2,0:2:3.01:0,3,38	1/1:5,8:13:6.11:268,6,0	1/1:3,7:10:8.83:207,9,0	1/1:8,12:20:13.60:346,14,0	1/1:4,12:16:35.68:359,36,0	1/1:0,5:5:15.03:153,15,0	1/1:5,17:22:48.03:480,48,0	0/0:5,0:5:9.01:0,9,98	1/1:8,9:16:32.25:304,32,0	1/1:6,11:17:35.53:349,36,0	1/1:4,19:23:51.12:520,51,0	1/1:3,14:17:45.08:451,45,0	0/0:14,0:14:30.08:0,30,356	0/0:4,0:4:12.04:0,12,150	1/1:4,13:17:36.55:366,37,0	0/1:4,21:25:6.77:544,0,7	1/1:2,8:10:28.61:275,29,0	1/1:1,15:16:39.07:391,39,0
chr10	68575098	.	T	TC	715.96	PASS	AC=24;AF=0.632;AN=38;BaseQRankSum=1.257;DP=110;FS=2.207;HRun=7;HaplotypeScore=20.0223;InbreedingCoeff=0.4884;MQ=36.77;MQ0=11;MQRankSum=-2.243;QD=13.26;ReadPosRankSum=0.525;VQSLOD=1.1050;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:6:15.03:0,15,153	./.	./.	0/0:6,0:2:3:0,3,25	0/0:7,0:6:6.01:0,6,61	1/1:3,3:6:9:113,9,0	./.	1/1:2,5:4:6.02:75,6,0	1/1:0,1:1:2.97:20,3,0	1/1:1,2:3:3.01:38,3,0	0/0:2,1:1:0:0,0,0	./.	1/1:2,2:2:6.02:75,6,0	1/1:1,1:2:5.98:58,6,0	./.	./.	./.	0/0:2,0:2:2.99:0,3,24	./.	1/1:3,1:4:3.01:38,3,0	1/1:3,16:18:20.80:257,21,0	1/1:1,1:2:3.01:38,3,0	0/0:4,0:1:3.01:0,3,31	0/0:7,0:7:9:0,9,85	./.	1/1:1,1:2:2.97:20,3,0	1/1:0,1:1:3.01:38,3,0	1/1:0,3:3:6.02:75,6,0
chr10	68576555	.	A	AT	13370.73	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=7.445;DP=600;FS=5.123;HRun=5;HaplotypeScore=89.7748;InbreedingCoeff=0.9495;MQ=74.65;MQ0=0;MQRankSum=0.146;QD=30.39;ReadPosRankSum=3.239;VQSLOD=5.4009;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,108,1087	1/1:0,7:7:17.97:214,18,0	0/0:32,0:27:41.95:0,42,462	0/0:17,0:16:2.27:0,2,135	0/0:30,0:30:87.17:0,87,909	1/1:0,22:22:60.20:789,60,0	1/1:0,14:14:30.10:394,30,0	1/1:27,0:27:9.49:111,9,0	1/1:0,22:22:60.19:787,60,0	1/1:4,25:29:84.23:1059,84,0	1/1:1,23:24:38.81:836,39,0	1/1:0,20:20:51.06:670,51,0	1/1:0,17:17:42.14:547,42,0	1/1:2,12:14:30.08:379,30,0	1/1:0,15:15:36.12:473,36,0	1/1:1,17:18:36.01:473,36,0	1/1:3,26:29:69.22:906,69,0	0/0:19,0:19:57.08:0,57,584	1/1:4,11:15:33.04:412,33,0	1/1:4,23:27:53.96:627,54,0	1/1:1,20:21:45.15:591,45,0	1/1:0,19:19:51.17:670,51,0	0/0:17,0:17:45.05:0,45,452	0/0:6,0:6:15.04:0,15,161	1/1:0,26:26:69.22:907,69,0	1/1:2,25:27:75.21:952,75,0	1/1:1,31:32:81.26:1059,81,0	1/1:0,14:15:39.13:513,39,0
chr10	68576939	.	TTTC	T	3438.01	PASS	AB=1.000;AC=42;AF=0.750;AN=56;BaseQRankSum=9.503;DP=477;FS=0.987;HRun=0;HaplotypeScore=84.5677;InbreedingCoeff=0.7889;MQ=67.83;MQ0=3;MQRankSum=0.435;QD=9.68;ReadPosRankSum=1.460;VQSLOD=3.2216;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:72.17:0,72,1272	1/1:4,0:4:2.97:20,3,0	0/0:19,0:13:17.93:0,18,186	0/1:13,0:7:0.71:1,0,28	0/0:34,0:34:68.20:0,68,1110	1/1:21,1:22:23.67:195,24,0	1/1:10,0:10:11.75:70,12,0	0/1:26,0:26:99:107,0,154	1/1:9,0:9:8.81:52,9,0	1/1:19,0:19:28.18:211,28,0	1/1:20,0:19:39.69:245,40,0	1/1:16,0:16:23.49:146,23,0	1/1:10,0:10:15.08:85,15,0	1/1:16,0:16:17.63:105,18,0	1/1:13,0:13:8.83:53,9,0	1/1:13,1:13:23.62:193,24,0	1/1:25,0:24:46.95:277,47,0	0/0:18,0:18:27.22:0,27,814	1/1:19,0:19:26.77:218,27,0	1/1:17,2:19:27.60:225,28,0	1/1:12,0:12:14.69:88,15,0	1/1:10,1:11:14.79:121,15,0	0/0:13,0:13:30.06:0,30,490	0/0:8,0:8:18.01:0,18,230	1/1:15,0:15:23.47:139,23,0	1/1:24,0:23:53.27:370,53,0	1/1:20,1:21:46.83:299,47,0	1/1:16,1:17:31.22:219,31,0
chr10	68576949	.	TTC	T	7452.82	PASS	AB=0.950;AC=41;AF=0.732;AN=56;BaseQRankSum=5.212;DP=454;FS=0.919;HRun=0;HaplotypeScore=58.1653;InbreedingCoeff=0.8255;MQ=60.09;MQ0=6;MQRankSum=0.034;QD=22.86;ReadPosRankSum=1.539;VQSLOD=4.6521;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:29:80.92:0,81,1082	1/1:1,4:5:8.81:61,9,0	0/0:16,0:8:17.78:0,18,162	0/0:12,0:4:2.20:0,2,40	0/0:27,0:26:69.39:0,69,900	1/1:3,15:18:29.88:356,30,0	1/1:2,6:7:12.04:181,12,0	0/1:18,1:19:58.46:138,0,58	1/1:3,7:10:9.03:136,9,0	1/1:2,14:16:38.92:407,39,0	1/1:3,20:22:30.10:457,30,0	1/1:3,12:14:26.11:348,26,0	1/1:0,9:9:15.05:224,15,0	1/1:1,12:13:18.06:272,18,0	1/1:0,11:11:9.03:137,9,0	1/1:5,11:13:27.05:347,27,0	1/1:0,26:25:48.16:722,48,0	0/0:22,0:22:38.12:0,38,714	1/1:11,9:20:55.64:615,56,0	1/1:3,14:17:35.84:358,36,0	1/1:0,10:10:15.05:227,15,0	1/1:2,8:10:14.87:135,15,0	0/0:13,0:13:33.01:0,33,413	0/0:7,0:7:17.98:0,18,190	1/1:0,17:17:24.08:362,24,0	1/1:3,23:25:63.03:761,63,0	1/1:3,17:20:33.68:703,34,0	1/1:4,13:17:38.68:505,39,0
chr10	68576950	.	TC	T	4994.26	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=9.022;DP=455;FS=0.459;HRun=1;HaplotypeScore=62.0061;InbreedingCoeff=0.9058;MQ=59.74;MQ0=7;MQRankSum=-2.989;QD=15.46;ReadPosRankSum=0.464;VQSLOD=4.4586;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:30:76.34:0,76,847	1/1:4,1:5:6.35:30,6,0	0/0:16,0:8:17.93:0,18,155	0/0:12,0:4:2.16:0,2,37	0/0:29,0:28:61.09:0,61,694	1/1:16,2:18:29.88:257,30,0	1/1:7,0:6:11.99:104,12,0	1/1:19,0:19:35.91:232,36,0	1/1:10,0:10:9.47:79,9,0	1/1:14,2:16:37.88:324,38,0	1/1:21,2:22:26.28:374,26,0	1/1:14,1:14:23.35:188,23,0	1/1:9,0:9:14.99:128,15,0	1/1:12,0:12:17.99:157,18,0	1/1:11,0:11:9:79,9,0	1/1:15,1:13:26.27:202,26,0	1/1:26,0:25:47.99:415,48,0	0/0:23,0:23:34.31:0,34,561	1/1:20,1:21:57.41:474,57,0	1/1:17,0:17:34.75:248,35,0	1/1:10,0:10:15:131,15,0	1/1:10,0:10:14.85:104,15,0	0/0:13,0:13:32.98:0,33,334	0/0:6,0:6:17.99:0,18,167	1/1:17,0:17:23.98:208,24,0	1/1:23,2:24:62.26:514,62,0	1/1:19,1:20:27.44:385,27,0	1/1:15,1:16:38.97:360,39,0
chr10	68578403	.	TG	T	9754.61	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=19.375;DP=671;FS=21.308;HRun=1;HaplotypeScore=189.6398;InbreedingCoeff=0.9960;MQ=80.03;MQ0=0;MQRankSum=-7.340;QD=23.28;ReadPosRankSum=1.421;VQSLOD=2.7605;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,135,2129	1/1:0,5:5:14.96:125,15,0	0/0:26,0:26:63.21:0,63,982	0/0:19,0:19:53.91:0,54,787	0/0:23,0:23:69.21:0,69,1053	1/1:1,16:17:50.94:446,51,0	1/1:1,28:29:83.65:650,84,0	0/0:20,0:20:60.19:0,60,915	1/1:3,18:21:62.65:490,63,0	0/0:25,0:25:33.76:0,34,281	0/0:8,0:8:23.28:0,23,132	1/1:2,23:25:72.40:592,72,0	1/1:3,19:22:65.71:523,66,0	1/1:1,29:30:89.66:739,90,0	1/1:0,23:23:68.83:590,69,0	1/1:1,24:25:74.84:629,75,0	1/1:5,39:44:99:1059,120,0	0/0:32,0:32:96.28:0,96,1498	1/1:1,15:16:44.83:366,45,0	1/1:2,16:18:47.85:401,48,0	1/1:6,43:49:99:1008,120,0	1/1:4,22:26:60.23:477,60,0	0/0:12,0:12:36.12:0,36,575	0/0:38,0:38:99:0,111,1655	1/1:0,21:21:59.92:524,60,0	1/1:4,15:19:45.77:388,46,0	1/1:3,20:22:68.86:587,69,0	1/1:0,6:6:17.99:160,18,0
chr10	68578406	.	CCT	C	16689.29	PASS	AB=1.000;AC=35;AF=0.625;AN=56;BaseQRankSum=18.879;DP=673;FS=9.364;HRun=0;HaplotypeScore=176.4699;InbreedingCoeff=0.9242;MQ=79.40;MQ0=0;MQRankSum=-6.449;QD=38.90;ReadPosRankSum=2.389;VQSLOD=5.5052;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,135,2716	1/1:5,0:5:15.05:220,15,0	0/0:24,0:24:66.23:0,66,1317	0/0:19,0:19:53.21:0,53,952	0/0:21,0:21:63.22:0,63,1279	1/1:20,0:20:54.17:771,54,0	1/1:30,0:30:87.25:1253,87,0	0/0:19,0:19:57.16:0,57,1109	1/1:21,0:21:60.17:855,60,0	0/0:25,0:25:75.24:0,75,1452	0/0:8,0:8:24.08:0,24,487	1/1:26,1:27:81.17:1089,81,0	1/1:24,0:24:54.34:852,54,0	1/1:31,0:31:93.26:1315,93,0	1/1:24,0:24:65.29:1012,65,0	1/1:25,0:25:75.24:1089,75,0	1/1:44,0:44:99:1695,117,0	0/0:34,0:34:99:0,102,1985	1/1:18,0:18:43.39:639,43,0	1/1:18,0:18:50.96:725,51,0	1/1:48,0:48:99:1629,109,0	1/1:22,3:25:57.17:846,57,0	0/0:13,0:13:39.13:0,39,792	0/0:35,0:35:99:0,102,1998	1/1:21,0:21:60.20:892,60,0	0/1:20,0:20:12.29:600,0,12	1/1:22,0:21:63.13:935,63,0	1/1:6,0:6:18.06:273,18,0
chr10	68578407	.	CT	C	9788.62	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=18.988;DP=673;FS=17.015;HRun=1;HaplotypeScore=187.4702;InbreedingCoeff=0.9955;MQ=80.01;MQ0=0;MQRankSum=-8.692;QD=22.82;ReadPosRankSum=1.152;VQSLOD=2.9536;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,135,2121	1/1:0,5:5:14.96:125,15,0	0/0:25,0:25:69.19:0,69,1078	0/0:19,0:19:53.31:0,53,704	0/0:21,0:21:63.21:0,63,1003	1/1:4,16:20:53.92:466,54,0	1/1:2,28:30:86.50:665,87,0	0/0:18,0:18:54.18:0,54,843	1/1:3,18:21:59.61:468,60,0	0/0:23,0:23:69.24:0,69,1099	0/0:8,0:8:24.08:0,24,383	1/1:6,23:29:82.76:639,83,0	1/1:4,19:23:67.39:504,67,0	1/1:2,29:31:92.60:755,93,0	1/1:2,23:25:71.77:607,72,0	1/1:1,24:25:74.78:627,75,0	1/1:5,39:44:99:1080,123,0	0/0:35,0:35:99:0,102,1566	1/1:3,15:18:50.70:402,51,0	1/1:0,18:18:50.64:412,51,0	1/1:4,43:47:99:1006,120,0	1/1:3,22:25:56.31:432,56,0	0/0:13,0:13:39.13:0,39,621	0/0:36,0:36:99:0,105,1602	1/1:0,21:21:59.90:522,60,0	1/1:1,19:20:21.40:385,21,0	1/1:0,21:21:62.85:535,63,0	1/1:0,6:6:17.99:160,18,0
chr10	68581230	.	ATGTGTGTGTGTGTGTGTGTGTGTG	A	6625.03	PASS	AB=0.727;AC=29;AF=0.630;AN=46;BaseQRankSum=8.164;DP=326;FS=2.771;HRun=0;HaplotypeScore=203.1739;InbreedingCoeff=0.6537;MQ=45.89;MQ0=11;MQRankSum=-5.084;QD=41.67;ReadPosRankSum=4.139;VQSLOD=3.8961;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:33.03:0,33,2909	1/1:1,0:6:15.05:785,15,0	./.	./.	0/0:18,0:16:27.09:0,27,2648	1/1:13,0:17:12.04:639,12,0	./.	0/0:31,0:30:24.08:0,24,980	1/1:7,0:7:1.25:4,1,0	0/0:13,0:13:15.05:0,15,384	0/0:11,0:11:9.03:0,9,168	1/1:6,0:6:3.01:155,3,0	1/1:5,0:8:9.03:492,9,0	1/1:3,0:4:3.01:155,3,0	1/1:4,1:5:3.01:188,3,0	1/1:5,0:6:3.01:165,3,0	1/1:13,0:15:6.02:335,6,0	0/0:11,0:13:13.60:0,14,408	1/1:10,4:15:17.97:942,18,0	1/1:6,2:8:6.02:375,6,0	./.	./.	0/0:7,0:7:6.02:0,6,138	0/0:12,0:18:21.01:0,21,1062	1/1:5,3:8:9.03:549,9,0	1/1:17,5:22:11.09:932,11,0	1/1:8,4:12:12.04:749,12,0	0/1:10,0:15:13.36:162,0,13
chr10	68582301	.	AAG	A	2157.60	PASS	AB=1.000;AC=35;AF=0.625;AN=56;BaseQRankSum=6.962;DP=503;FS=9.503;HRun=0;HaplotypeScore=100.3637;InbreedingCoeff=0.3382;MQ=44.12;MQ0=33;MQRankSum=-6.968;QD=6.50;ReadPosRankSum=-5.889;VQSLOD=0.1408;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:48.59:0,49,628	0/1:7,0:6:1.84:44,0,2	0/0:44,0:7:10.71:0,11,58	0/0:43,1:5:0.47:0,0,1	0/0:27,0:25:51.64:0,52,411	1/1:13,0:12:28.15:172,28,0	0/1:17,0:14:22.70:74,0,23	1/1:33,0:29:41.76:329,42,0	1/1:15,0:15:7.60:127,8,0	1/1:17,0:15:14.85:160,15,0	0/1:7,0:6:11.35:18,0,11	1/1:9,3:11:10.98:78,11,0	1/1:16,0:16:5.21:140,5,0	1/1:10,0:10:14.57:99,15,0	1/1:17,1:17:12.15:106,12,0	1/1:12,0:10:17.87:93,18,0	0/1:23,0:20:32.53:63,0,33	0/0:10,0:10:10.74:0,11,79	0/1:19,0:15:29.75:100,0,30	1/1:16,0:15:13.98:120,14,0	1/1:5,0:5:7.87:41,8,0	0/1:10,0:10:0.75:53,0,1	0/1:15,0:15:0.35:0,0,195	0/0:15,0:14:19.34:0,19,186	0/1:13,0:12:3.35:125,0,3	1/1:25,0:22:17.63:221,18,0	1/1:25,0:22:3.86:162,4,0	0/1:4,0:4:6.22:7,0,6
chr10	68582332	.	AAAGC	A	8666.10	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=11.481;DP=408;FS=6.073;HRun=0;HaplotypeScore=98.0067;InbreedingCoeff=0.9472;MQ=57.41;MQ0=12;MQRankSum=-7.436;QD=31.86;ReadPosRankSum=-0.822;VQSLOD=4.3327;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:75.16:0,75,1514	1/1:8,0:8:24.04:305,24,0	0/0:21,0:11:9.56:0,10,262	0/0:20,0:11:24.38:0,24,286	0/0:28,0:28:63.11:0,63,1195	1/1:13,0:13:36.09:569,36,0	1/1:17,0:16:36.05:562,36,0	1/1:10,20:27:57.07:719,57,0	1/1:9,0:8:24.05:347,24,0	1/1:21,0:19:48.08:703,48,0	1/1:8,0:7:18.04:247,18,0	1/1:8,0:8:24.05:321,24,0	1/1:11,0:11:27.07:410,27,0	1/1:8,0:8:21.06:322,21,0	1/1:9,0:9:18.05:273,18,0	1/1:8,0:8:24.07:371,24,0	1/1:20,0:18:29.99:362,30,0	0/0:5,0:11:15.01:0,15,246	1/1:20,0:20:36.02:460,36,0	1/1:14,0:14:30.09:472,30,0	1/1:5,0:5:15.05:247,15,0	1/1:13,0:13:33.04:380,33,0	0/0:12,0:12:30.09:0,30,672	0/0:14,0:12:29.96:0,30,520	1/1:11,0:10:30.08:452,30,0	1/1:21,0:19:45.13:679,45,0	1/1:13,0:10:27.08:416,27,0	1/1:5,0:3:3.01:49,3,0
chr10	68582335	.	GC	G	2158.67	PASS	AB=0.717;AC=33;AF=0.589;AN=56;BaseQRankSum=12.931;DP=412;FS=3.641;HRun=1;HaplotypeScore=102.1199;InbreedingCoeff=0.4571;MQ=62.13;MQ0=10;MQRankSum=-5.624;QD=8.70;ReadPosRankSum=3.668;VQSLOD=1.4824;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:93.30:0,93,1446	1/1:4,4:8:11.49:69,11,0	0/0:22,0:12:34.48:0,34,445	0/0:19,0:14:35.24:0,35,507	0/0:26,0:26:75.26:0,75,1190	1/1:2,11:13:31.37:180,31,0	0/1:9,9:17:97.02:161,0,97	0/0:27,0:26:50.40:0,50,485	1/1:5,6:10:20.52:115,21,0	1/1:10,11:19:1.22:214,1,0	1/1:3,4:6:13.68:61,14,0	1/1:3,5:8:17.78:95,18,0	1/1:2,8:11:23.81:135,24,0	0/1:5,4:9:10.96:89,0,11	1/1:3,5:8:17.10:94,17,0	1/1:4,4:8:21.37:138,21,0	0/1:14,6:18:24.06:85,0,24	0/0:11,0:11:18.05:0,18,264	0/1:15,5:20:84.52:90,0,85	0/1:7,7:14:27.32:140,0,27	1/1:2,4:6:15.01:92,15,0	1/1:11,4:15:7.76:94,8,0	0/0:12,0:12:36.12:0,36,569	0/0:14,0:12:36.11:0,36,536	1/1:6,7:12:28.14:154,28,0	1/1:7,13:18:38.17:233,38,0	0/1:4,9:10:9.35:117,0,9	0/1:4,1:3:6.69:7,0,67
chr10	68582337	.	AAGC	A	4247.78	PASS	AB=0.777;AC=36;AF=0.643;AN=56;BaseQRankSum=13.323;DP=426;FS=4.053;HRun=0;HaplotypeScore=112.7309;InbreedingCoeff=0.4954;MQ=65.51;MQ0=10;MQRankSum=-7.295;QD=14.90;ReadPosRankSum=4.837;VQSLOD=4.2705;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:93.32:0,93,1982	1/1:5,4:9:9.10:134,9,0	0/0:23,0:13:38.14:0,38,650	0/0:22,0:16:38.74:0,39,747	0/0:26,0:26:78.26:0,78,1633	1/1:2,11:13:20.71:290,21,0	0/1:10,9:18:59.90:287,0,60	0/1:30,0:29:35.56:36,0,393	1/1:5,6:10:27.51:207,28,0	0/1:13,11:22:20.04:365,0,20	1/1:3,4:6:17.10:119,17,0	1/1:4,5:9:9.46:155,9,0	1/1:3,8:11:28.74:238,29,0	1/1:5,4:9:20.99:188,21,0	1/1:3,5:8:20.19:163,20,0	1/1:4,4:8:23.52:222,24,0	1/1:14,6:18:1.46:151,1,0	0/0:11,0:11:18.06:0,18,357	0/1:15,5:20:70.43:185,0,70	0/1:7,7:14:1.71:251,0,2	1/1:3,4:7:4.01:137,4,0	1/1:12,4:16:23.08:206,23,0	0/0:12,0:12:33.11:0,33,722	0/0:15,0:13:39.13:0,39,795	1/1:6,7:12:33.81:265,34,0	1/1:6,13:17:43.36:389,43,0	1/1:4,9:10:26.26:239,26,0	0/1:4,1:3:20.07:20,0,31
chr10	68583082	.	GT	G	15905.08	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=13.466;DP=680;FS=3.744;HRun=2;HaplotypeScore=66.5048;InbreedingCoeff=0.9999;MQ=72.32;MQ0=0;MQRankSum=-3.346;QD=38.51;ReadPosRankSum=3.014;VQSLOD=5.5988;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:60,0:60:99:0,178,2795	1/1:0,11:11:33.11:456,33,0	0/0:19,0:19:54.17:0,54,795	0/0:14,0:14:42.13:0,42,602	0/0:27,0:27:78.26:0,78,1232	1/1:0,24:24:66.22:923,66,0	1/1:0,34:34:87.29:1217,87,0	0/0:27,0:27:81.28:0,81,1290	1/1:0,19:19:57.19:797,57,0	0/0:31,0:31:93.32:0,93,1486	0/0:23,0:23:69.23:0,69,1088	1/1:0,16:16:45.15:629,45,0	1/1:0,28:28:84.28:1174,84,0	1/1:0,29:29:78.26:1091,78,0	1/1:0,34:34:96.32:1343,96,0	1/1:0,13:13:39.13:545,39,0	1/1:0,33:33:93.31:1300,93,0	0/0:14,0:14:42.14:0,42,672	1/1:0,18:18:54.13:716,54,0	1/1:0,27:27:66.17:899,66,0	1/1:0,32:32:81.27:1133,81,0	1/1:0,23:23:63.21:881,63,0	0/0:16,0:16:48.14:0,48,741	0/0:36,0:36:99:0,102,1631	1/1:0,16:16:45.15:629,45,0	1/1:0,25:25:75.25:1047,75,0	1/1:0,20:20:51.01:705,51,0	1/1:0,11:11:30.10:420,30,0
chr10	68583847	.	G	GGAGA	12726.44	PASS	AB=0.666;AC=37;AF=0.661;AN=56;BaseQRankSum=-4.824;DP=601;FS=41.036;HRun=0;HaplotypeScore=112.8968;InbreedingCoeff=0.5611;MQ=67.31;MQ0=7;MQRankSum=0.500;QD=28.66;ReadPosRankSum=0.597;VQSLOD=2.8004;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:27:60.71:0,61,923	1/1:4,7:13:18.06:431,18,0	0/0:22,0:15:12.04:0,12,183	0/0:21,0:15:11.20:0,11,223	0/0:28,0:28:51.14:0,51,786	1/1:7,6:20:28.77:419,29,0	0/1:8,2:13:7.48:166,0,7	0/0:17,0:17:27.07:0,27,398	1/1:3,17:25:62.15:1292,62,0	0/1:11,0:20:70.34:71,0,70	0/1:12,0:25:72.26:72,0,141	1/1:12,6:21:3.40:431,3,0	1/1:6,9:16:26.33:597,26,0	1/1:5,13:21:38.60:821,39,0	1/1:7,9:18:23.82:525,24,0	1/1:0,10:15:32.32:623,32,0	1/1:7,11:21:35.59:734,36,0	1/1:7,0:11:6.02:103,6,0	1/1:8,11:20:38.27:562,38,0	0/1:12,12:35:42.44:884,0,42	1/1:8,10:19:29.84:671,30,0	0/1:10,9:22:65.48:513,0,65	0/0:18,0:23:43.51:0,44,762	0/0:16,0:18:39.13:0,39,615	1/1:6,10:22:35.33:684,35,0	1/1:13,12:29:49.82:851,50,0	1/1:9,31:41:81.11:1921,81,0	1/1:7,4:11:15.05:357,15,0
chr10	68585081	.	A	AT	7947.84	PASS	AB=1.000;AC=37;AF=0.661;AN=56;BaseQRankSum=-10.727;DP=561;FS=1.098;HRun=9;HaplotypeScore=56.7431;InbreedingCoeff=0.9185;MQ=75.84;MQ0=1;MQRankSum=-1.042;QD=24.31;ReadPosRankSum=2.853;VQSLOD=5.6756;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,2:45:59.54:0,60,962	1/1:0,7:7:18.05:199,18,0	0/0:24,0:22:27.20:0,27,212	0/1:12,0:11:9.38:9,0,95	0/0:23,0:24:68.01:0,68,575	1/1:2,14:16:33.09:365,33,0	1/1:1,17:18:45.12:498,45,0	0/0:39,1:41:67.80:0,68,799	1/1:2,15:17:45.12:498,45,0	0/0:25,0:25:62.93:0,63,540	0/0:20,0:20:56.98:0,57,495	1/1:1,8:9:24.06:265,24,0	1/1:3,10:13:27.07:298,27,0	1/1:5,13:18:10.06:338,10,0	1/1:3,9:12:28.88:295,29,0	1/1:2,10:13:26.90:280,27,0	1/1:6,20:26:57.15:630,57,0	0/0:17,0:17:41.93:0,42,357	1/1:3,19:22:35.82:569,36,0	1/1:3,15:18:19.47:414,19,0	1/1:7,19:26:28.05:525,28,0	1/1:5,12:18:38.94:412,39,0	0/0:11,0:11:26.99:0,27,234	0/0:27,0:27:68.85:0,69,588	1/1:3,19:22:59.19:637,59,0	1/1:1,19:20:57.15:630,57,0	1/1:2,19:21:45.12:497,45,0	1/1:0,19:19:54.13:588,54,0
chr10	68586252	.	C	CT	275.80	PASS	AB=1.000;AC=5;AF=0.250;AN=20;BaseQRankSum=2.152;DP=158;FS=0.000;HRun=14;HaplotypeScore=31.7832;InbreedingCoeff=0.4353;MQ=63.43;MQ0=15;MQRankSum=-1.217;QD=4.60;ReadPosRankSum=0.526;VQSLOD=-0.0610;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:51.72:0,52,332	0/1:1,0:1:0:0,0,0	0/1:30,0:6:1.05:1,0,7	0/0:18,0:5:2.01:0,2,6	0/0:18,0:16:40.78:0,41,254	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	1/1:15,12:27:14.56:352,15,0	0/0:3,0:2:1.55:0,2,4	./.	./.	0/1:1,0:1:0:0,0,0	0/0:2,0:3:7.95:0,8,44	0/0:12,1:13:0.03:0,0,124	./.	./.	./.	./.
chr10	68587162	.	T	TCATG	33806.29	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-14.871;DP=789;FS=16.883;HRun=0;HaplotypeScore=108.9147;InbreedingCoeff=0.9986;MQ=82.32;MQ0=0;MQRankSum=-7.739;QD=58.90;ReadPosRankSum=4.169;VQSLOD=5.7815;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:84.27:0,84,1474	1/1:2,16:18:42.14:1029,42,0	0/0:30,0:30:78.09:0,78,1317	0/0:19,0:19:51.14:0,51,843	0/0:37,0:37:99:0,108,1916	1/1:5,21:27:60.20:1393,60,0	1/1:4,18:23:45.15:1087,45,0	0/0:35,0:35:87.27:0,87,1466	1/1:3,23:27:69.24:1784,69,0	1/1:8,32:42:99:2633,114,0	1/1:5,24:29:57.19:1359,57,0	1/1:6,24:30:81.28:1943,81,0	1/1:2,22:24:63.22:1602,63,0	1/1:3,26:29:69.24:1773,69,0	1/1:3,32:36:81.28:2021,81,0	1/1:5,36:41:99:2548,102,0	1/1:3,22:26:60.20:1523,60,0	0/0:16,0:16:45.11:0,45,775	1/1:10,19:29:60.17:1401,60,0	1/1:8,29:37:87.29:2090,87,0	1/1:2,23:27:63.21:1521,63,0	1/1:3,31:35:87.29:2122,87,0	0/0:28,0:28:69.21:0,69,1188	0/0:19,0:19:37.20:0,37,952	1/1:2,19:21:51.17:1292,51,0	1/1:0,23:23:69.24:1756,69,0	1/1:5,34:40:99:2460,99,0	1/1:3,6:10:18.06:471,18,0
chr10	68589063	.	GT	G	12265.90	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=18.749;DP=599;FS=28.356;HRun=1;HaplotypeScore=158.9887;InbreedingCoeff=0.9981;MQ=78.49;MQ0=0;MQRankSum=-18.736;QD=35.97;ReadPosRankSum=3.097;VQSLOD=2.2759;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,117,1833	1/1:1,8:9:26.87:312,27,0	0/0:18,0:18:51.14:0,51,744	0/0:24,0:24:69.15:0,69,1000	0/0:36,0:36:99:0,108,1698	1/1:3,26:29:86.64:1046,87,0	1/1:0,17:17:51.16:653,51,0	0/0:26,0:26:75.24:0,75,1157	1/1:0,23:23:60.19:768,60,0	0/0:31,0:31:93.32:0,93,1487	0/0:30,0:30:90.31:0,90,1424	1/1:2,18:20:60.06:761,60,0	1/1:0,24:24:69.21:879,69,0	1/1:4,20:24:69.20:876,69,0	1/1:2,19:21:59.98:753,60,0	1/1:3,22:25:74.44:902,74,0	1/1:0,7:7:18.06:233,18,0	0/0:16,0:16:48.12:0,48,710	1/1:0,13:13:39.13:520,39,0	1/1:0,25:25:71.85:857,72,0	1/1:2,10:12:26.10:306,26,0	1/1:2,18:20:59.96:691,60,0	0/0:22,0:22:66.20:0,66,1009	0/0:15,0:15:45.09:0,45,654	1/1:0,14:14:36.11:456,36,0	1/1:0,23:23:69.22:899,69,0	1/1:1,26:27:81.18:1031,81,0	1/1:1,7:8:24.08:322,24,0
chr10	68589068	.	T	TAA	14598.11	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=19.122;DP=552;FS=31.480;HRun=0;HaplotypeScore=150.1137;InbreedingCoeff=0.9979;MQ=84.39;MQ0=0;MQRankSum=-18.760;QD=50.17;ReadPosRankSum=6.148;VQSLOD=2.8163;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,111,1776	1/1:0,9:9:27.09:465,27,0	0/0:24,0:24:57.13:0,57,854	0/0:23,0:23:69.08:0,69,998	0/0:36,0:36:99:0,108,1734	1/1:3,23:26:78.24:1316,78,0	1/1:0,14:14:42.14:731,42,0	0/0:26,0:26:75.26:0,75,1220	1/1:0,17:17:51.17:910,51,0	0/0:31,0:31:93.32:0,93,1517	0/0:30,0:30:87.30:0,87,1420	1/1:2,17:19:54.18:972,54,0	1/1:3,19:22:57.19:1022,57,0	1/1:0,20:20:60.21:1069,60,0	1/1:4,16:20:57.19:991,57,0	1/1:4,19:23:66.22:1146,66,0	1/1:1,5:6:18.02:291,18,0	0/0:17,0:17:51.15:0,51,801	1/1:2,9:11:30.55:511,31,0	1/1:0,16:16:48.16:817,48,0	1/1:2,8:10:24.05:377,24,0	1/1:1,16:17:51.17:839,51,0	0/0:22,0:22:63.21:0,63,1019	0/0:15,0:15:45.15:0,45,729	1/1:1,11:12:33.11:570,33,0	1/1:1,18:19:57.20:1010,57,0	1/1:2,20:22:66.22:1150,66,0	1/1:1,7:8:24.08:413,24,0
chr10	68589069	.	T	TAAA	15675.25	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=18.864;DP=557;FS=31.441;HRun=0;HaplotypeScore=157.3503;InbreedingCoeff=0.9980;MQ=84.75;MQ0=0;MQRankSum=-18.280;QD=53.14;ReadPosRankSum=5.897;VQSLOD=3.2580;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,108,1945	1/1:9,0:9:27.09:552,27,0	0/0:23,0:24:63.20:0,63,1084	0/0:24,0:24:68.12:0,68,1068	0/0:37,0:37:99:0,105,1897	1/1:23,3:26:75.26:1433,75,0	1/1:14,0:14:42.14:749,42,0	0/0:25,0:25:75.25:0,75,1362	1/1:19,0:19:51.17:955,51,0	0/0:31,0:31:93.31:0,93,1698	0/0:30,0:30:90.29:0,90,1647	1/1:19,0:19:57.18:1053,57,0	1/1:21,0:21:57.20:1051,57,0	1/1:20,0:20:60.21:1124,60,0	1/1:18,1:19:54.19:1050,54,0	1/1:19,4:24:66.23:1277,66,0	1/1:6,0:6:18.06:313,18,0	0/0:19,0:19:51.17:0,51,940	1/1:11,0:11:33.10:575,33,0	1/1:16,0:16:48.16:855,48,0	1/1:10,2:12:24.08:402,24,0	1/1:16,1:17:51.17:961,51,0	0/0:21,0:21:63.18:0,63,1139	0/0:15,0:15:45.11:0,45,803	1/1:12,0:12:33.11:603,33,0	1/1:19,0:19:57.20:1087,57,0	1/1:21,1:22:66.22:1201,66,0	1/1:8,0:9:24.08:435,24,0
chr10	68589070	.	T	TAAAG	18955.89	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=18.237;DP=601;FS=25.029;HRun=0;HaplotypeScore=181.1243;InbreedingCoeff=0.9985;MQ=81.48;MQ0=0;MQRankSum=-18.960;QD=55.43;ReadPosRankSum=3.702;VQSLOD=4.1501;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,102,2120	1/1:10,0:10:30.10:601,30,0	0/0:24,0:24:66.19:0,66,1272	0/0:23,0:23:66:0,66,1179	0/0:36,0:36:99:0,102,2082	1/1:28,0:28:78.20:1499,78,0	1/1:16,0:16:48.16:912,48,0	0/0:26,0:26:72.22:0,72,1469	1/1:21,0:21:60.19:1148,60,0	0/0:30,0:30:90.29:0,90,1817	0/0:30,0:30:90.31:0,90,1876	1/1:21,0:21:63.22:1231,63,0	1/1:24,0:24:66.23:1281,66,0	1/1:23,0:23:69.24:1353,69,0	1/1:21,2:25:63.22:1269,63,0	1/1:25,0:25:69.02:1356,69,0	1/1:7,0:7:18.06:345,18,0	0/0:20,0:20:57.15:0,57,1114	1/1:15,0:15:45.15:916,45,0	1/1:19,0:19:56:1060,56,0	1/1:15,0:15:33.10:603,33,0	1/1:20,0:20:60.21:1136,60,0	0/0:21,0:21:60.21:0,60,1252	0/0:15,0:15:42.14:0,42,881	1/1:14,0:14:39.02:766,39,0	1/1:20,3:24:72.23:1496,72,0	1/1:26,0:26:78.27:1500,78,0	1/1:9,0:9:27.07:486,27,0
chr10	68589834	.	A	ACACA	3620.46	PASS	AB=1.000;AC=38;AF=0.731;AN=52;BaseQRankSum=-3.559;DP=642;FS=0.873;HRun=0;HaplotypeScore=110.1891;InbreedingCoeff=0.6075;MQ=55.17;MQ0=6;MQRankSum=1.691;QD=7.62;ReadPosRankSum=-0.503;VQSLOD=2.7098;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:42,0:42:4.10:4,0,95	1/1:9,0:9:4.87:31,5,0	./.	./.	0/0:26,0:25:5.99:0,6,53	1/1:24,0:24:17.30:161,17,0	0/1:19,0:18:2.48:236,0,2	1/1:33,0:32:0.89:2,1,0	1/1:33,0:32:17.41:197,17,0	0/0:26,0:26:7.40:0,7,100	0/0:17,0:17:3:0,3,46	1/1:24,0:24:8.08:119,8,0	1/1:25,0:25:32.23:399,32,0	1/1:22,0:22:9.64:144,10,0	1/1:23,0:23:25.24:345,25,0	1/1:20,0:20:11.95:171,12,0	1/1:19,0:19:19.71:249,20,0	0/0:17,0:17:6.01:0,6,56	1/1:14,0:14:13.07:88,13,0	1/1:16,0:16:9:113,9,0	1/1:46,0:46:36.07:579,36,0	1/1:21,0:21:18.02:290,18,0	0/0:22,0:22:3.47:0,3,29	0/0:38,0:37:29.62:0,30,382	1/1:18,0:17:6:115,6,0	1/1:25,0:25:12.30:154,12,0	1/1:22,9:31:17.42:196,17,0	1/1:10,0:10:5.03:29,5,0
chr10	68590602	.	C	CA	773.04	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-7.792;DP=631;FS=3.092;HRun=2;HaplotypeScore=60.0208;InbreedingCoeff=0.9692;MQ=92.99;MQ0=0;MQRankSum=1.170;QD=33.61;ReadPosRankSum=-3.302;VQSLOD=2.5188;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,150,1829	0/0:9,0:9:27.08:0,27,335	0/0:25,0:25:69.10:0,69,817	0/0:29,0:29:75.23:0,75,920	0/0:26,0:26:75.24:0,75,930	0/0:16,0:16:48.15:0,48,595	0/0:32,0:32:87.23:0,87,1039	1/1:2,21:23:63.17:868,63,0	0/0:19,0:19:57.15:0,57,679	0/0:22,0:22:66.19:0,66,806	0/0:15,0:15:42.11:0,42,498	0/0:27,0:27:78.23:0,78,953	0/0:22,0:22:63.20:0,63,780	0/0:33,0:33:99:0,99,1227	0/0:22,0:22:66.19:0,66,806	0/0:19,0:19:57.18:0,57,706	0/0:22,0:22:63.20:0,63,781	0/0:17,0:17:48.15:0,48,593	0/0:21,0:21:57.18:0,57,706	0/0:18,0:18:48.15:0,48,595	0/0:42,0:42:99:0,126,1522	0/0:15,0:15:45.14:0,45,558	0/0:16,0:15:48.14:0,48,584	0/0:29,0:28:84.26:0,84,1031	0/0:14,0:14:42.12:0,42,508	0/0:25,0:25:66.19:0,66,796	0/0:19,0:18:54.15:0,54,655	0/0:4,0:4:12.04:0,12,149
chr10	68592896	.	A	AT	9926.80	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-12.674;DP=588;FS=3.324;HRun=8;HaplotypeScore=53.4298;InbreedingCoeff=0.9958;MQ=62.00;MQ0=10;MQRankSum=-0.741;QD=28.36;ReadPosRankSum=1.535;VQSLOD=5.3897;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,150,1372	1/1:3,9:12:21.06:242,21,0	0/0:13,0:8:23.69:0,24,200	0/0:10,0:7:15:0,15,137	0/0:27,0:27:71.99:0,72,651	1/1:2,15:17:45.13:519,45,0	1/1:0,21:21:54.16:621,54,0	0/0:25,0:25:53.96:0,54,486	1/1:3,15:18:45.13:519,45,0	0/0:23,0:23:56.98:0,57,512	0/0:17,0:17:51.03:0,51,467	1/1:2,12:14:33.10:381,33,0	1/1:0,14:14:36.11:416,36,0	1/1:0,12:12:33.10:381,33,0	1/1:0,16:16:39.12:450,39,0	1/1:4,16:20:42.12:485,42,0	1/1:3,28:30:72.21:831,72,0	0/0:16,0:16:45.02:0,45,412	1/1:2,21:22:59.52:691,60,0	1/1:3,22:26:69.04:776,69,0	1/1:1,11:12:27.08:310,27,0	1/1:2,14:17:38.95:430,39,0	0/0:23,0:23:62.89:0,63,559	0/0:32,0:32:90.03:0,90,819	1/1:3,28:31:72.21:831,72,0	1/1:3,22:25:63.19:727,63,0	1/1:1,32:32:93.28:1073,93,0	1/1:0,8:7:21.06:242,21,0
chr10	68598124	.	CAGAGAG	C	5608.12	PASS	AB=0.657;AC=30;AF=0.577;AN=52;BaseQRankSum=2.355;DP=608;FS=3.770;HRun=0;HaplotypeScore=138.6235;InbreedingCoeff=0.4242;MQ=58.06;MQ0=17;MQRankSum=-8.752;QD=15.04;ReadPosRankSum=-0.032;VQSLOD=4.4035;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:42.12:0,42,1094	1/1:2,10:12:24.47:372,24,0	./.	./.	0/0:31,0:32:63.55:0,64,1443	0/1:14,10:24:34.86:106,0,35	1/1:6,7:14:9.03:159,9,0	0/0:22,0:24:24:0,24,303	1/1:5,10:17:27.04:472,27,0	0/1:14,0:30:99:294,0,108	0/1:5,0:18:58.91:103,0,59	1/1:8,7:15:9.03:176,9,0	1/1:12,16:27:33.11:630,33,0	1/1:8,13:22:21.06:362,21,0	1/1:9,17:26:26.12:473,26,0	1/1:12,18:31:33.11:653,33,0	0/1:7,12:19:36.78:285,0,37	1/1:2,11:13:5.04:216,5,0	0/0:10,0:13:6.31:0,6,73	0/1:13,0:23:11.40:11,0,216	0/0:8,0:8:6.01:0,6,61	1/1:11,10:22:2.41:346,2,0	0/0:12,0:14:12.04:0,12,292	0/0:22,0:27:45.97:0,46,1102	1/1:8,10:18:11.23:247,11,0	0/1:16,11:27:63.07:457,0,63	0/0:19,0:37:44.28:0,44,541	1/1:2,8:10:12.04:246,12,0
chr10	68598179	.	G	GGA	1210.88	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-5.512;DP=798;FS=11.970;HRun=0;HaplotypeScore=128.6636;InbreedingCoeff=0.8498;MQ=53.26;MQ0=24;MQRankSum=1.898;QD=35.61;ReadPosRankSum=-4.331;VQSLOD=3.5582;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:39.10:0,39,475	0/0:21,0:21:42.09:0,42,507	0/0:80,0:19:3.78:0,4,231	0/0:112,0:26:27.67:0,28,553	0/0:32,0:32:63.04:0,63,762	0/0:25,0:25:60.19:0,60,750	0/0:14,0:14:24.08:0,24,300	1/1:5,27:33:84.26:1306,84,0	0/0:19,0:19:42.12:0,42,512	0/0:29,0:30:75.06:0,75,903	0/0:24,0:24:57.18:0,57,712	0/0:18,0:18:48.15:0,48,597	0/0:27,0:27:60.19:0,60,746	0/0:16,0:17:38.95:0,39,464	0/0:32,0:32:63.20:0,63,776	0/0:30,0:30:66.21:0,66,821	0/0:27,0:27:39.20:0,39,680	0/0:12,0:12:15.05:0,15,188	0/0:20,0:20:57.15:0,57,684	0/0:19,0:19:39.12:0,39,488	0/0:17,0:17:42.13:0,42,525	0/0:22,0:22:51.16:0,51,638	0/0:16,0:15:24.08:0,24,300	0/0:28,0:28:54.12:0,54,643	0/0:20,0:20:36.10:0,36,437	0/0:34,0:33:78.23:0,78,959	0/0:25,0:25:42.08:0,42,525	0/0:18,0:18:42.11:0,42,510
chr10	68598989	.	AT	A	1255.85	PASS	AB=0.908;AC=10;AF=0.179;AN=56;BaseQRankSum=9.203;DP=648;FS=2.982;HRun=12;HaplotypeScore=67.7739;InbreedingCoeff=0.4831;MQ=75.27;MQ0=0;MQRankSum=0.835;QD=8.21;ReadPosRankSum=-0.157;VQSLOD=2.5762;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,2:32:34.88:0,35,710	0/0:11,1:12:6.82:0,7,251	0/1:16,0:17:24.90:25,0,109	0/1:12,1:14:12.84:13,0,97	0/0:17,1:18:15.83:0,16,336	0/0:19,1:20:27.85:0,28,453	0/0:19,1:20:27.23:0,27,436	1/1:5,24:29:46.36:504,46,0	0/0:14,1:15:21.75:0,22,389	1/1:9,27:37:79.66:603,80,0	1/1:5,14:20:10.43:254,10,0	0/0:21,1:22:21.84:0,22,398	0/0:20,2:22:7.62:0,8,435	0/0:27,1:28:45.83:0,46,616	0/0:33,1:35:54.87:0,55,721	0/1:15,2:18:7.41:7,0,343	0/0:23,0:23:24.85:0,25,426	0/0:21,1:22:42.89:0,43,614	0/0:25,1:28:18.46:0,18,416	0/0:21,1:23:1.45:0,1,362	0/0:23,1:24:14.97:0,15,366	0/0:29,0:29:51.93:0,52,701	0/0:15,0:17:35.89:0,36,338	0/0:25,2:28:28.51:0,29,637	0/0:22,1:25:43.75:0,44,575	0/0:25,0:26:62.95:0,63,616	0/0:26,0:26:57.01:0,57,563	0/1:16,2:18:1.39:1,0,350
chr10	68601624	.	C	CTGCT	10439.24	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=7.336;DP=477;FS=8.374;HRun=0;HaplotypeScore=79.5426;InbreedingCoeff=0.9564;MQ=70.45;MQ0=0;MQRankSum=-2.211;QD=30.89;ReadPosRankSum=1.121;VQSLOD=4.1080;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:75.17:0,75,1161	1/1:5,0:5:9.03:168,9,0	0/0:26,0:24:27.94:0,28,396	0/0:22,0:21:30.15:0,30,428	0/0:23,0:23:42.13:0,42,651	1/1:23,0:22:39.13:743,39,0	1/1:22,0:22:39.13:763,39,0	1/1:7,14:22:49.25:773,49,0	1/1:21,0:21:39.13:732,39,0	1/1:16,0:15:30.03:472,30,0	1/1:10,0:10:17.93:261,18,0	1/1:18,0:18:24.08:453,24,0	1/1:8,0:8:9.03:166,9,0	1/1:12,0:12:21.07:414,21,0	1/1:17,0:17:33.07:577,33,0	1/1:14,0:14:24.08:453,24,0	1/1:19,0:19:33.11:619,33,0	0/0:5,0:5:12.04:0,12,195	1/1:15,0:15:14.95:144,15,0	1/1:14,0:14:30.10:577,30,0	1/1:37,0:37:60.21:1138,60,0	1/1:9,0:9:18.02:307,18,0	0/0:7,0:7:12.04:0,12,193	0/0:21,0:21:42.11:0,42,652	1/1:15,1:15:27.05:483,27,0	1/1:19,0:19:30.01:454,30,0	1/1:9,0:9:14.83:286,15,0	1/1:12,0:12:24.08:456,24,0
chr10	68601634	.	G	GCTTA	14834.98	PASS	AB=1.000;AC=41;AF=0.732;AN=56;BaseQRankSum=-12.090;DP=515;FS=11.585;HRun=0;HaplotypeScore=67.2297;InbreedingCoeff=0.8791;MQ=71.18;MQ0=0;MQRankSum=-2.178;QD=40.53;ReadPosRankSum=4.681;VQSLOD=4.3985;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,103,1611	1/1:0,4:4:9.03:243,9,0	0/0:24,0:20:48.19:0,48,728	0/0:29,0:26:52.68:0,53,744	0/0:21,0:21:51.13:0,51,858	1/1:1,22:22:39.13:1050,39,0	1/1:1,22:25:38.71:1048,39,0	0/1:21,0:20:99:322,0,108	1/1:1,21:23:39.13:1043,39,0	1/1:1,13:14:42.09:786,42,0	1/1:0,11:12:26.90:450,27,0	1/1:1,17:18:27.07:669,27,0	1/1:0,10:10:9.03:234,9,0	1/1:1,12:14:21.07:564,21,0	1/1:0,18:18:33.11:837,33,0	1/1:2,14:16:24.08:646,24,0	1/1:0,18:18:33.11:889,33,0	0/0:7,0:7:18:0,18,272	1/1:2,12:16:41.96:496,42,0	1/1:0,17:17:50.81:956,51,0	1/1:2,36:39:57.20:1536,57,0	1/1:0,7:7:20.99:457,21,0	0/0:9,0:9:27.01:0,27,349	0/0:23,0:23:66.11:0,66,981	1/1:1,16:18:27.09:668,27,0	1/1:2,16:18:48.10:907,48,0	1/1:0,9:10:14.83:404,15,0	1/1:1,22:23:13.10:631,13,0
chr10	68601730	.	CT	C	982.47	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=6.525;DP=397;FS=2.144;HRun=10;HaplotypeScore=44.2049;InbreedingCoeff=0.8897;MQ=72.21;MQ0=4;MQRankSum=-0.386;QD=17.86;ReadPosRankSum=-1.189;VQSLOD=3.6218;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:54.13:0,54,589	0/0:7,0:7:18.05:0,18,198	0/0:17,0:12:17.23:0,17,129	0/0:23,0:14:12.32:0,12,134	0/0:15,0:15:42.08:0,42,446	0/0:12,2:14:7.03:0,7,298	0/0:8,0:8:21.04:0,21,222	1/1:7,22:29:65.81:553,66,0	0/0:7,0:7:18.05:0,18,199	1/1:1,11:13:32.03:266,32,0	1/1:1,12:13:35.95:305,36,0	0/0:7,0:7:21.06:0,21,232	0/0:6,0:6:18.05:0,18,199	0/0:5,0:5:12:0,12,120	0/0:7,0:7:21.06:0,21,232	0/0:11,0:11:27.07:0,27,299	0/0:32,0:32:90.21:0,90,978	0/0:37,0:37:86.66:0,87,887	0/0:11,0:10:24.05:0,24,257	0/0:10,0:10:24.06:0,24,265	0/0:4,0:4:6.02:0,6,66	0/0:5,0:5:15.04:0,15,166	0/0:10,0:10:24.05:0,24,257	0/0:8,0:8:15.04:0,15,166	0/0:12,0:12:33.07:0,33,349	0/0:23,0:23:39.28:0,39,633	0/0:11,0:11:30.05:0,30,314	0/0:31,0:31:69.19:0,69,763
chr10	68602591	.	ATT	A	704.96	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=2.660;DP=553;FS=5.326;HRun=14;HaplotypeScore=89.2307;InbreedingCoeff=0.9136;MQ=58.06;MQ0=0;MQRankSum=3.014;QD=14.69;ReadPosRankSum=2.004;VQSLOD=3.0330;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:34:80.01:0,80,957	0/0:9,0:8:23.54:0,24,268	0/0:27,0:16:15.02:0,15,196	0/0:13,0:8:13.86:0,14,116	0/0:21,1:24:19.74:0,20,624	0/0:23,0:25:55.19:0,55,693	0/0:20,0:20:54.07:0,54,660	0/0:7,0:13:24.03:0,24,241	0/0:13,0:13:33.05:0,33,419	1/1:6,19:25:53.90:496,54,0	1/1:6,15:21:35.90:331,36,0	0/0:11,0:14:31.52:0,32,304	0/0:20,0:21:53.55:0,54,636	0/0:12,0:13:29.50:0,30,329	0/0:12,0:14:38.06:0,38,419	0/0:19,0:19:54.08:0,54,661	0/0:21,0:25:58.55:0,59,664	0/0:4,0:12:9.02:0,9,98	0/0:18,0:19:34.53:0,35,362	0/0:19,0:19:47.63:0,48,622	0/0:14,0:14:24.08:0,24,336	0/0:14,1:17:13.90:0,14,451	0/0:28,0:29:36.40:0,36,717	0/0:17,0:20:49.55:0,50,558	0/0:16,0:16:35.59:0,36,451	0/0:20,2:26:9.58:0,10,608	0/0:20,1:23:53.62:0,54,653	0/0:13,0:17:46.44:0,46,575
chr10	68605683	.	AAG	A	2819.51	PASS	AB=1.000;AC=51;AF=0.944;AN=54;BaseQRankSum=-3.072;DP=175;FS=0.000;HRun=0;HaplotypeScore=20.6043;InbreedingCoeff=0.0595;MQ=54.49;MQ0=0;MQRankSum=0.585;QD=16.20;ReadPosRankSum=0.287;VQSLOD=3.0131;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,6:6:11.99:162,12,0	1/1:4,0:4:5.98:54,6,0	1/1:0,1:1:3.01:49,3,0	0/0:1,0:0:2.74:0,3,12	1/1:3,0:3:3.01:49,3,0	1/1:5,0:5:6.02:88,6,0	1/1:0,10:10:9.03:142,9,0	./.	1/1:0,2:2:2.93:47,3,0	1/1:3,0:3:9.02:92,9,0	1/1:4,0:4:5.98:55,6,0	0/1:8,0:8:6.02:191,0,6	1/1:5,0:5:9.02:106,9,0	1/1:0,8:8:3.01:48,3,0	1/1:1,8:9:9.03:139,9,0	1/1:2,15:17:11.62:145,12,0	1/1:1,8:9:6.01:70,6,0	1/1:0,6:6:6.02:97,6,0	1/1:0,10:10:30.08:445,30,0	1/1:1,7:8:8.29:81,8,0	1/1:3,0:3:3.01:39,3,0	1/1:8,1:9:20.94:230,21,0	1/1:0,4:4:2.43:19,2,0	1/1:1,2:3:2.99:23,3,0	1/1:13,0:13:11.01:147,11,0	1/1:1,6:7:20.87:251,21,0	1/1:6,0:6:8.95:92,9,0	1/1:11,0:11:3.01:49,3,0
chr10	68605684	.	AG	A	1886.23	PASS	AC=52;AF=0.963;AN=54;BaseQRankSum=-2.183;DP=177;FS=2.616;HRun=3;HaplotypeScore=22.6666;InbreedingCoeff=0.1584;MQ=54.56;MQ0=0;MQRankSum=-0.223;QD=10.72;ReadPosRankSum=0.104;VQSLOD=1.2890;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,0:6:11.97:103,12,0	1/1:4,0:4:5.98:55,6,0	1/1:1,0:1:2.98:21,3,0	0/0:1,0:0:3:0,3,27	1/1:1,2:3:2.99:23,3,0	1/1:1,4:5:5.94:41,6,0	1/1:10,0:10:9.01:86,9,0	./.	1/1:2,0:2:2.57:27,3,0	1/1:3,0:3:8.72:57,9,0	1/1:4,0:4:5.88:37,6,0	1/1:7,1:8:6.70:152,7,0	1/1:7,0:7:14.99:132,15,0	1/1:8,0:8:3:28,3,0	1/1:9,0:9:9.02:88,9,0	1/1:17,0:17:12:107,12,0	1/1:9,0:9:5.99:49,6,0	1/1:6,0:6:6:52,6,0	1/1:10,0:10:29.92:249,30,0	1/1:8,0:8:8.92:62,9,0	1/1:1,2:3:3.01:37,3,0	1/1:8,1:9:20.89:164,21,0	1/1:4,0:4:2.89:20,3,0	1/1:3,0:3:1.25:3,1,0	1/1:7,6:13:17.90:139,18,0	1/1:7,0:7:17.89:149,18,0	1/1:6,0:6:8.96:74,9,0	1/1:0,11:11:2.99:23,3,0
chr10	68605687	.	GT	G	418.83	PASS	AB=0.953;AC=28;AF=0.519;AN=54;BaseQRankSum=1.279;DP=201;FS=2.456;HRun=1;HaplotypeScore=31.0706;InbreedingCoeff=0.0305;MQ=54.22;MQ0=0;MQRankSum=-4.928;QD=2.59;ReadPosRankSum=5.712;VQSLOD=-0.6290;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:9,0:9:18.55:19,0,54	1/1:5,0:5:2.81:16,3,0	0/0:1,0:1:2.68:0,3,11	0/0:1,0:0:3.01:0,3,43	0/0:3,0:3:2.67:0,3,18	1/1:5,0:5:2.11:12,2,0	1/1:10,0:10:8.56:44,9,0	./.	0/1:3,0:3:9.67:10,0,18	0/0:4,0:4:3.51:0,4,37	0/0:5,0:5:1.50:0,1,23	0/1:9,1:10:22.76:44,0,23	1/1:7,0:7:6.24:25,6,0	0/1:11,0:11:1.90:2,0,20	0/1:9,1:10:13.12:51,0,13	0/1:17,2:19:11.33:87,0,11	0/1:11,1:12:34.06:34,0,35	0/1:7,0:7:6.93:7,0,17	0/1:10,0:10:0.49:8,0,0	0/0:10,1:11:2.99:0,3,40	1/1:2,1:3:2.90:16,3,0	1/1:9,1:10:11.82:64,12,0	1/1:4,0:4:1.17:3,1,0	0/0:2,1:3:2.37:0,2,8	1/1:6,7:13:9.87:103,10,0	0/1:7,1:8:0.95:1,0,25	1/1:6,0:6:4.31:14,4,0	0/0:11,0:11:0.47:0,0,1
chr10	68608287	.	GA	G	1298.10	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.742;DP=801;FS=9.747;HRun=4;HaplotypeScore=72.1015;InbreedingCoeff=0.9701;MQ=59.71;MQ0=1;MQRankSum=2.127;QD=31.66;ReadPosRankSum=-4.730;VQSLOD=1.3906;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,129,1789	0/0:14,0:14:33.10:0,33,446	0/0:29,0:21:60.17:0,60,820	0/0:28,0:27:76.47:0,76,1003	0/0:38,0:38:99:0,105,1406	0/0:21,0:21:63.21:0,63,882	0/0:32,0:32:96.28:0,96,1293	1/1:1,40:41:99:1393,120,0	0/0:22,0:22:66.22:0,66,916	0/0:33,0:33:93.31:0,93,1302	0/0:21,0:21:63.20:0,63,859	0/0:34,0:34:99:0,99,1353	0/0:27,0:27:78.20:0,78,1038	0/0:33,0:33:90.29:0,90,1244	0/0:35,0:35:99:0,102,1411	0/0:37,0:37:99:0,111,1554	0/0:42,0:42:99:0,123,1668	0/0:24,0:24:69.23:0,69,966	0/0:29,0:28:75.24:0,75,1032	0/0:26,0:26:78.26:0,78,1084	0/0:39,0:39:99:0,99,1349	0/0:17,0:17:51.16:0,51,697	0/0:26,0:26:75.24:0,75,1033	0/0:29,0:29:87.27:0,87,1185	0/0:26,0:26:66.21:0,66,908	0/0:29,0:29:78.26:0,78,1086	0/0:22,0:22:66.21:0,66,907	0/0:4,0:4:12.04:0,12,168
chr10	68612041	.	C	CT	7598.16	PASS	AB=0.724;AC=40;AF=0.714;AN=56;BaseQRankSum=-8.511;DP=536;FS=7.123;HRun=10;HaplotypeScore=52.4306;InbreedingCoeff=0.7672;MQ=63.87;MQ0=3;MQRankSum=0.736;QD=19.43;ReadPosRankSum=0.067;VQSLOD=5.4973;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:13,1:14:10.76:0,11,202	1/1:1,8:9:21.05:224,21,0	0/0:21,0:16:21.53:0,22,154	0/0:15,0:11:10.60:0,11,132	1/1:7,29:36:78.20:832,78,0	1/1:5,16:23:41.94:430,42,0	1/1:3,13:16:27.07:288,27,0	1/1:16,24:41:68.97:701,69,0	1/1:2,3:5:8.98:84,9,0	0/0:22,3:25:12.89:0,13,313	0/0:33,0:33:80.85:0,81,659	1/1:4,11:15:24.06:255,24,0	0/1:4,9:13:3.59:171,0,4	1/1:4,16:20:32.92:352,33,0	1/1:1,17:18:42.11:448,42,0	1/1:3,7:10:24.05:249,24,0	1/1:4,14:20:50.94:516,51,0	0/0:18,0:18:36.41:0,36,296	1/1:4,14:17:23.24:397,23,0	1/1:4,17:23:44.72:421,45,0	1/1:3,1:5:3.31:15,3,0	1/1:0,7:7:15.04:159,15,0	0/0:16,1:16:3.97:0,4,239	0/1:10,2:12:5.02:5,0,170	1/1:3,23:26:51.13:544,51,0	1/1:4,20:24:32.47:535,32,0	1/1:3,20:23:48.12:510,48,0	1/1:6,20:26:4.85:463,5,0
chr10	68612573	.	AATAT	A	1913.43	PASS	AC=10;AF=0.357;AN=28;BaseQRankSum=1.214;DP=166;FS=4.208;HRun=0;HaplotypeScore=34.2494;InbreedingCoeff=0.5840;MQ=89.79;MQ0=1;MQRankSum=-0.689;QD=24.22;ReadPosRankSum=1.033;VQSLOD=2.8382;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:9:9.03:0,9,191	./.	0/0:10,0:9:1.82:0,2,5	0/0:12,0:6:1.22:0,1,3	0/0:9,0:9:18.05:0,18,395	./.	0/0:4,0:4:3.01:0,3,47	1/1:11,18:29:54.14:824,54,0	./.	1/1:7,15:22:45.14:700,45,0	1/1:4,10:14:24.08:401,24,0	0/0:6,0:6:3.01:0,3,49	./.	./.	./.	./.	1/1:5,0:5:0.47:1,0,0	1/1:6,3:9:6.02:100,6,0	./.	./.	./.	./.	0/0:7,0:7:3.01:0,3,74	0/0:4,0:4:6.02:0,6,146	./.	./.	0/0:4,0:4:3.01:0,3,44	./.
chr10	68613479	.	C	CT	4710.22	PASS	AB=0.728;AC=40;AF=0.714;AN=56;BaseQRankSum=-3.754;DP=595;FS=0.906;HRun=12;HaplotypeScore=82.9098;InbreedingCoeff=0.4051;MQ=74.40;MQ0=8;MQRankSum=0.466;QD=9.79;ReadPosRankSum=-1.680;VQSLOD=3.9666;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,1:46:62.30:0,62,599	1/1:1,12:15:29.72:262,30,0	0/1:41,0:17:14.65:15,0,60	0/1:33,0:17:9.29:9,0,34	0/0:15,0:17:30.80:0,31,205	1/1:3,15:19:3.57:270,4,0	1/1:6,18:25:14.88:381,15,0	1/1:6,2:24:35.14:231,35,0	0/1:7,9:16:37.42:150,0,37	1/1:11,2:28:33.88:165,34,0	1/1:2,1:10:9.39:69,9,0	1/1:2,16:18:18.02:171,18,0	0/1:5,17:23:4.84:267,0,5	1/1:6,17:23:28.40:265,28,0	1/1:4,13:17:15.01:140,15,0	0/1:4,10:15:16.93:163,0,17	0/1:8,18:26:26.22:252,0,26	0/0:18,0:18:41.73:0,42,306	1/1:8,14:20:33.05:320,33,0	1/1:2,15:18:22.84:338,23,0	1/1:6,19:26:32.88:302,33,0	1/1:4,11:15:14.03:159,14,0	0/0:13,0:14:4.66:0,5,157	0/0:19,0:19:44.55:0,45,316	1/1:6,7:13:15.90:144,16,0	1/1:4,13:18:29.82:257,30,0	1/1:6,10:17:2.85:170,3,0	1/1:6,12:17:5.13:212,5,0
chr10	68613853	.	GC	G	786.74	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=1.963;DP=685;FS=4.070;HRun=2;HaplotypeScore=80.0042;InbreedingCoeff=0.9998;MQ=85.63;MQ0=0;MQRankSum=-0.236;QD=34.21;ReadPosRankSum=-3.822;VQSLOD=2.3452;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,123,1915	0/0:13,0:13:39.13:0,39,623	0/0:18,0:18:54.16:0,54,792	0/0:30,0:30:81.23:0,81,1215	0/0:25,0:25:75.24:0,75,1158	0/0:21,0:21:63.20:0,63,974	0/0:37,0:37:99:0,111,1723	1/1:0,23:23:66.19:882,66,0	0/0:26,0:26:78.27:0,78,1241	0/0:25,0:25:75.25:0,75,1179	0/0:20,0:20:60.19:0,60,936	0/0:37,0:37:99:0,108,1692	0/0:27,0:27:81.25:0,81,1256	0/0:18,0:18:54.14:0,54,824	0/0:23,0:23:69.24:0,69,1103	0/0:25,0:25:75.26:0,75,1195	0/0:21,0:21:63.19:0,63,975	0/0:17,0:17:51.17:0,51,808	0/0:22,0:22:66.21:0,66,1022	0/0:20,0:20:57.18:0,57,884	0/0:50,0:50:99:0,150,2323	0/0:22,0:22:63.21:0,63,1005	0/0:16,0:16:44.97:0,45,684	0/0:28,0:28:81.27:0,81,1262	0/0:19,0:19:57.18:0,57,885	0/0:30,0:30:87.30:0,87,1391	0/0:19,0:19:57.19:0,57,911	0/0:12,0:12:36.12:0,36,571
chr10	68614113	.	GTT	G	6232.89	PASS	AB=0.549;AC=39;AF=0.696;AN=56;BaseQRankSum=-1.342;DP=512;FS=0.787;HRun=13;HaplotypeScore=69.5098;InbreedingCoeff=0.8806;MQ=72.68;MQ0=5;MQRankSum=-0.844;QD=17.36;ReadPosRankSum=4.237;VQSLOD=4.0435;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:22:58.67:0,59,733	1/1:3,5:8:15:145,15,0	0/0:15,0:14:23.51:0,24,221	0/0:12,0:10:17.03:0,17,150	0/0:25,0:26:58.39:0,58,848	1/1:6,15:22:38.70:361,39,0	1/1:3,5:9:17.75:157,18,0	1/1:4,20:26:55.64:574,56,0	1/1:2,16:19:26.97:312,27,0	0/1:5,2:28:10.99:11,0,270	0/0:6,2:23:14.83:0,15,130	1/1:2,13:15:30.03:291,30,0	1/1:3,12:16:3.77:236,4,0	1/1:2,8:10:15:145,15,0	1/1:2,21:24:45.52:492,46,0	1/1:3,15:18:38.78:378,39,0	1/1:1,15:16:39.05:378,39,0	0/0:19,0:22:50.60:0,51,644	1/1:4,14:19:27.54:399,28,0	1/1:1,14:14:23.05:231,23,0	1/1:1,5:6:11.99:116,12,0	1/1:1,15:16:42.05:407,42,0	0/0:23,0:23:68.69:0,69,917	0/0:9,0:9:24.07:0,24,328	1/1:4,17:22:23.92:281,24,0	1/1:6,22:32:41.74:600,42,0	1/1:5,17:21:38.99:378,39,0	1/1:0,13:14:29.98:341,30,0
chr10	68615079	.	A	AGT	2547.72	PASS	AB=0.760;AC=27;AF=0.500;AN=54;BaseQRankSum=-7.537;DP=670;FS=0.000;HRun=0;HaplotypeScore=96.3428;InbreedingCoeff=-0.1173;MQ=62.37;MQ0=13;MQRankSum=-0.470;QD=5.86;ReadPosRankSum=1.152;VQSLOD=2.9689;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:29.16:0,29,274	1/1:6,5:11:3.01:45,3,0	./.	0/0:35,0:19:0.47:0,0,1	0/0:25,0:25:3.37:0,3,229	0/1:19,10:29:96.73:114,0,97	0/1:13,15:28:27:329,0,27	1/1:28,0:27:9.74:57,10,0	0/1:15,2:18:26.82:39,0,27	0/0:12,0:29:33.95:0,34,181	0/0:11,0:20:11.36:0,11,56	1/1:23,5:26:6.02:88,6,0	0/1:14,2:14:77.30:116,0,77	0/1:19,4:23:15.42:179,0,15	0/1:15,7:21:20.82:123,0,21	0/1:16,9:25:74.83:75,0,83	1/1:17,9:27:1.43:166,1,0	1/1:13,0:13:8.31:47,8,0	1/1:11,3:14:6.02:88,6,0	1/1:10,11:20:11.84:179,12,0	0/1:29,13:42:24.78:244,0,25	0/1:9,6:15:24.53:80,0,25	0/0:17,0:17:24.84:0,25,245	0/0:46,0:46:54.09:0,54,569	0/1:6,6:13:14.78:197,0,15	0/1:23,3:24:23.24:185,0,23	0/1:10,11:22:28.91:162,0,29	0/1:8,5:14:44.60:203,0,45
chr10	68616655	.	TCATTAGTA	T	425.68	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.826;DP=805;FS=1.535;HRun=0;HaplotypeScore=196.9628;InbreedingCoeff=0.9618;MQ=93.04;MQ0=0;MQRankSum=-4.177;QD=60.81;ReadPosRankSum=0.671;VQSLOD=3.7875;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,126,5434	0/0:10,0:10:30.10:0,30,1341	0/0:35,0:35:99:0,102,3949	0/0:33,0:33:90.02:0,90,3372	0/0:27,0:27:81.28:0,81,3553	0/0:34,0:34:99:0,102,4243	0/0:23,0:23:66.21:0,66,2729	0/0:43,0:43:99:0,120,4841	0/0:22,0:22:63.22:0,63,2650	0/0:42,0:41:99:0,126,5400	0/0:25,0:25:75.24:0,75,3009	0/0:33,0:33:96.33:0,96,4052	0/0:24,0:24:69.24:0,69,3078	0/0:33,0:33:93.32:0,93,4147	0/0:33,0:33:99:0,99,4235	0/0:42,0:42:99:0,123,5452	0/0:33,0:33:96.33:0,96,4037	1/1:0,7:7:18.06:516,18,0	0/0:38,0:38:99:0,114,4756	0/0:26,0:26:78.25:0,78,3275	0/0:43,0:43:99:0,126,5406	0/0:27,0:27:81.26:0,81,3509	0/0:27,0:27:81.28:0,81,3488	0/0:25,0:25:72.25:0,72,3091	0/0:13,0:13:39.13:0,39,1679	0/0:35,0:35:93.32:0,93,4046	0/0:26,0:26:78.27:0,78,3485	0/0:4,0:4:12.04:0,12,524
chr10	68617527	.	T	TA	10432.24	PASS	AB=0.543;AC=41;AF=0.732;AN=56;BaseQRankSum=-9.706;DP=579;FS=1.757;HRun=9;HaplotypeScore=62.0757;InbreedingCoeff=0.9004;MQ=76.19;MQ0=2;MQRankSum=-2.246;QD=23.82;ReadPosRankSum=1.202;VQSLOD=5.7734;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:77.90:0,78,661	1/1:0,5:5:9.02:100,9,0	0/0:26,0:20:10.58:0,11,183	0/0:14,0:12:5.93:0,6,164	0/0:16,1:17:38.08:0,38,404	1/1:5,14:19:33.09:365,33,0	1/1:3,11:14:10.05:339,10,0	1/1:6,16:22:27.61:476,28,0	1/1:3,21:24:25.37:505,25,0	1/1:2,3:19:51.73:315,52,0	1/1:4,0:18:39.99:206,40,0	1/1:4,19:23:27.86:536,28,0	1/1:3,23:26:63.17:697,63,0	1/1:2,15:17:39.11:431,39,0	1/1:3,17:20:42.11:465,42,0	1/1:3,25:28:63.17:697,63,0	1/1:3,25:28:69.19:762,69,0	0/0:18,0:18:35.97:0,36,312	1/1:5,14:19:35.47:372,35,0	1/1:2,20:22:60.14:654,60,0	1/1:4,17:21:45.12:498,45,0	1/1:2,18:20:54.14:593,54,0	0/0:24,0:24:65.94:0,66,567	0/0:15,0:15:44.99:0,45,390	1/1:2,21:23:14.07:612,14,0	1/1:4,30:34:87.05:933,87,0	0/1:3,16:19:0.68:447,0,1	1/1:0,14:14:39.11:431,39,0
chr10	68617613	.	C	CA	408.81	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=-2.448;DP=513;FS=6.870;HRun=11;HaplotypeScore=106.9136;InbreedingCoeff=0.4568;MQ=65.31;MQ0=8;MQRankSum=1.510;QD=9.29;ReadPosRankSum=-3.297;VQSLOD=1.9148;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,1:22:32.79:0,33,375	0/0:11,0:11:29.89:0,30,233	0/0:23,1:12:9.82:0,10,47	0/0:26,1:13:22.72:0,23,159	0/0:19,1:21:21.53:0,22,345	0/0:17,0:17:5.96:0,6,46	0/0:15,0:15:38.82:0,39,299	1/1:9,17:24:33.69:502,34,0	0/0:14,0:14:20.92:0,21,163	0/0:14,0:14:32.90:0,33,263	0/0:24,1:25:55.81:0,56,426	0/1:17,0:17:0:0,0,0	0/0:20,0:20:5.95:0,6,43	0/0:10,0:10:2.98:0,3,23	0/0:12,0:12:5.44:0,5,227	0/0:20,0:21:40.85:0,41,309	0/0:16,0:16:11.95:0,12,93	0/0:15,0:15:8.37:0,8,243	0/0:18,1:19:15.47:0,15,285	0/0:25,0:25:35.85:0,36,278	0/0:12,0:12:14.93:0,15,116	0/0:21,2:24:5.22:0,5,328	0/0:12,0:12:23.86:0,24,182	0/0:12,0:12:14.86:0,15,111	0/0:19,0:19:2.95:0,3,23	0/0:18,0:18:41.77:0,42,319	0/0:22,0:22:2.97:0,3,24	0/0:15,0:14:20.80:0,21,150
chr10	68617631	.	TCTTTCTTCCTTCCTTC	T	11333.97	PASS	AB=0.911;AC=36;AF=0.643;AN=56;BaseQRankSum=0.629;DP=515;FS=0.887;HRun=0;HaplotypeScore=166.9371;InbreedingCoeff=0.3984;MQ=60.82;MQ0=7;MQRankSum=-2.125;QD=30.63;ReadPosRankSum=4.404;VQSLOD=3.8950;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:43.57:0,44,2507	1/1:10,0:10:30.08:798,30,0	0/0:24,0:11:26.63:0,27,294	0/0:27,0:12:29.13:0,29,387	0/0:25,0:25:69.18:0,69,2833	1/1:1,16:16:3.01:98,3,0	1/1:12,0:12:33.03:646,33,0	0/1:26,0:26:99:223,0,512	1/1:10,0:10:30.09:834,30,0	0/1:19,0:17:99:574,0,141	0/1:24,0:24:99:549,0,208	1/1:0,22:22:8.76:253,9,0	1/1:0,22:22:3.01:101,3,0	1/1:1,9:10:3.01:96,3,0	1/1:12,0:12:33.08:821,33,0	1/1:13,4:16:48.14:1409,48,0	0/1:2,19:22:27:127,0,27	0/0:20,0:19:54.09:0,54,1411	1/1:17,0:15:42.05:903,42,0	1/1:1,28:28:38.77:610,39,0	1/1:9,0:9:2:182,2,0	0/1:24,0:24:87.12:1303,0,87	0/0:16,0:15:33.98:0,34,1290	0/0:8,0:8:24.08:0,24,941	1/1:0,18:18:6.02:189,6,0	0/1:16,1:16:44.82:1101,0,45	1/1:2,21:22:5.63:182,6,0	1/1:1,9:10:9.03:334,9,0
chr10	68617667	.	CCTTT	C	297.34	PASS	AB=1.000;AC=5;AF=0.100;AN=50;BaseQRankSum=-0.957;DP=509;FS=0.000;HRun=0;HaplotypeScore=125.8045;InbreedingCoeff=0.6678;MQ=49.37;MQ0=11;MQRankSum=1.795;QD=6.91;ReadPosRankSum=1.421;VQSLOD=2.6878;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:45.02:0,45,559	0/0:9,0:9:5.97:0,6,47	./.	./.	0/0:24,0:24:26.96:0,27,278	0/0:15,0:14:6:0,6,52	0/0:11,0:11:14.95:0,15,123	./.	1/1:17,0:17:20.91:167,21,0	0/0:25,0:23:9.67:0,10,167	0/0:20,0:20:24.02:0,24,269	0/0:24,0:24:12.37:0,12,149	0/0:29,0:29:33.01:0,33,295	0/0:10,0:10:11.99:0,12,103	0/0:12,0:12:20.97:0,21,182	0/0:19,0:18:15.64:0,16,142	0/0:28,0:28:29.74:0,30,243	0/0:27,0:26:32.15:0,32,232	0/0:19,0:17:8.98:0,9,78	0/0:27,0:27:17.95:0,18,148	0/0:9,0:9:11.81:0,12,84	0/0:14,0:14:14.98:0,15,131	0/0:12,10:21:0.47:0,0,1	1/1:15,0:15:27.45:247,27,0	0/0:22,0:22:18.01:0,18,164	0/0:22,0:20:20.64:0,21,167	0/0:21,0:20:11.97:0,12,100	0/1:11,0:9:1.03:1,0,16
chr10	68618032	.	A	AT	644.62	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-6.763;DP=487;FS=0.750;HRun=9;HaplotypeScore=49.8810;InbreedingCoeff=0.8389;MQ=64.51;MQ0=0;MQRankSum=-0.812;QD=18.96;ReadPosRankSum=-3.480;VQSLOD=2.4910;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:23.98:0,24,208	0/0:9,0:9:26.88:0,27,214	0/0:8,0:7:17.96:0,18,150	0/0:10,0:10:5.18:0,5,72	0/0:26,0:26:68.92:0,69,589	0/0:29,0:29:80.88:0,81,683	0/0:9,0:9:20.98:0,21,179	1/1:12,22:33:69.15:739,69,0	0/0:12,0:12:29.99:0,30,260	0/0:25,0:25:65.97:0,66,571	0/0:21,0:21:34.36:0,34,439	0/0:14,0:14:29.98:0,30,260	0/0:17,0:17:44.94:0,45,382	0/0:8,0:8:20.98:0,21,179	0/0:17,0:17:44.99:0,45,391	0/0:25,0:25:56.99:0,57,495	0/0:24,0:24:60.46:0,60,521	0/0:16,0:16:47.99:0,48,417	0/0:30,1:31:33.04:0,33,506	0/0:19,0:19:44.97:0,45,390	0/0:9,0:9:17.98:0,18,156	0/0:9,0:9:20.95:0,21,175	0/0:14,0:14:35.91:0,36,304	0/0:10,0:10:23.99:0,24,208	0/0:22,0:22:56.93:0,57,488	0/0:30,0:30:71.86:0,72,609	0/0:23,1:24:23.73:0,24,427	0/0:5,0:5:12:0,12,104
chr10	68618552	.	CATT	C	15191.74	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=14.765;DP=635;FS=11.494;HRun=0;HaplotypeScore=160.6770;InbreedingCoeff=0.9969;MQ=68.77;MQ0=0;MQRankSum=-13.775;QD=40.08;ReadPosRankSum=1.914;VQSLOD=5.4355;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:75.21:0,75,1553	1/1:3,5:8:18.05:262,18,0	0/0:17,0:17:48.10:0,48,964	0/0:18,0:18:42.01:0,42,724	0/0:23,0:23:66.20:0,66,1400	1/1:0,25:25:75.26:1187,75,0	1/1:1,13:14:39.13:618,39,0	0/0:42,0:42:99:0,105,2161	1/1:7,20:27:66.21:1022,66,0	0/0:30,0:30:90.31:0,90,1961	0/0:28,0:28:78.27:0,78,1685	1/1:3,32:35:99:1546,99,0	1/1:5,14:19:48.16:739,48,0	1/1:1,25:26:78.27:1234,78,0	1/1:4,14:18:45.15:713,45,0	1/1:11,22:33:78.22:1168,78,0	1/1:1,13:14:30.10:475,30,0	0/0:21,0:21:57.18:0,57,1202	1/1:5,17:22:51.17:797,51,0	1/1:7,22:28:66.18:1018,66,0	1/1:7,7:14:18.04:261,18,0	1/1:0,17:17:48.16:760,48,0	0/0:33,0:33:87.30:0,87,1882	0/0:17,0:17:45.15:0,45,974	1/1:1,23:24:66.22:1045,66,0	1/1:2,21:23:66.18:1018,66,0	1/1:5,19:24:63.21:995,63,0	1/1:0,7:7:21.07:333,21,0
chr10	68618591	.	G	GA	20119.08	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=15.372;DP=665;FS=1.051;HRun=2;HaplotypeScore=167.0678;InbreedingCoeff=0.9988;MQ=65.25;MQ0=0;MQRankSum=-16.587;QD=40.98;ReadPosRankSum=-1.486;VQSLOD=4.0514;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:93.30:0,93,1206	1/1:1,8:9:24.08:358,24,0	0/0:25,0:25:69.21:0,69,864	0/0:28,0:28:74.27:0,74,932	0/0:31,0:31:93.30:0,93,1207	1/1:4,33:37:99:1536,108,0	1/1:0,15:15:45.11:645,45,0	1/1:14,28:42:99:1772,123,0	1/1:1,23:24:66.18:939,66,0	1/1:4,23:27:75.25:1123,75,0	1/1:2,15:17:45.10:627,45,0	1/1:4,43:47:99:1985,135,0	1/1:1,19:20:60.19:878,60,0	1/1:0,28:28:84.28:1256,84,0	1/1:4,18:22:63.16:883,63,0	1/1:3,28:31:87.26:1266,87,0	1/1:2,16:18:48.16:707,48,0	0/0:14,0:14:42.14:0,42,545	1/1:4,13:17:45.13:652,45,0	1/1:4,19:23:66.17:925,66,0	1/1:3,11:14:36.55:510,37,0	1/1:2,14:16:42.14:615,42,0	0/0:30,0:30:90.29:0,90,1169	0/0:14,0:14:42.14:0,42,545	1/1:3,26:29:78.24:1131,78,0	1/1:2,22:24:72.24:1071,72,0	1/1:2,20:22:63.21:941,63,0	1/1:4,5:9:21.07:297,21,0
chr10	68618615	.	GT	G	16461.48	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=16.169;DP=680;FS=0.666;HRun=2;HaplotypeScore=151.2257;InbreedingCoeff=0.9892;MQ=73.59;MQ0=0;MQRankSum=-13.640;QD=33.46;ReadPosRankSum=1.487;VQSLOD=4.3119;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:93.31:0,93,1391	1/1:0,11:11:27.09:350,27,0	0/0:29,0:29:80.52:0,81,1196	0/0:26,0:26:73.53:0,74,1114	0/0:33,0:33:96.30:0,96,1400	1/1:2,35:37:93.30:1205,93,0	1/1:1,16:17:42.14:545,42,0	1/1:5,33:38:96.30:1233,96,0	1/1:2,20:22:51.17:661,51,0	1/1:0,25:25:75.24:970,75,0	1/1:2,18:20:48.14:608,48,0	1/1:3,38:41:99:1361,105,0	1/1:2,17:19:51.17:661,51,0	1/1:0,27:27:78.25:1011,78,0	1/1:0,25:25:69.22:894,69,0	1/1:2,29:31:87.28:1128,87,0	1/1:0,16:16:39.13:505,39,0	0/0:17,0:17:48.12:0,48,694	1/1:1,16:17:45.15:583,45,0	1/1:2,23:25:54.18:700,54,0	1/1:0,17:17:30.10:389,30,0	1/1:0,17:17:48.16:622,48,0	0/0:32,0:32:93.31:0,93,1374	0/0:19,0:19:57.17:0,57,832	1/1:1,25:26:72.23:934,72,0	1/1:2,20:22:60.19:778,60,0	1/1:0,34:34:93.30:1206,93,0	1/1:0,5:5:9.03:117,9,0
chr10	68619698	.	ATATT	A	14841.76	PASS	AB=0.553;AC=35;AF=0.625;AN=56;BaseQRankSum=13.073;DP=578;FS=0.336;HRun=0;HaplotypeScore=141.1335;InbreedingCoeff=0.8957;MQ=77.25;MQ0=0;MQRankSum=-7.171;QD=41.00;ReadPosRankSum=4.290;VQSLOD=5.2662;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:42.14:0,42,1095	1/1:0,6:6:15.05:280,15,0	0/0:25,0:25:45.92:0,46,1430	0/0:13,0:12:5.73:0,6,340	0/0:42,0:42:99:0,123,3214	1/1:2,21:23:54.18:1007,54,0	1/1:3,12:15:24.08:447,24,0	0/0:30,0:30:84.27:0,84,2090	1/1:1,13:14:39.13:727,39,0	0/0:31,0:31:90.30:0,90,2313	0/0:22,0:22:60.19:0,60,1541	1/1:4,17:21:39.13:727,39,0	1/1:2,26:28:63.22:1175,63,0	1/1:2,21:23:54.19:1007,54,0	1/1:1,13:14:33.11:616,33,0	1/1:2,16:18:36.12:672,36,0	1/1:1,7:8:9.03:168,9,0	0/0:8,0:8:24.08:0,24,605	1/1:4,20:24:60.16:1053,60,0	1/1:4,31:35:66.22:1231,66,0	1/1:2,14:16:24.08:448,24,0	1/1:1,25:26:75.26:1398,75,0	0/0:17,0:17:48.16:0,48,1273	0/0:14,0:14:42.14:0,42,1084	1/1:3,24:27:66.23:1231,66,0	0/1:4,17:21:99:864,0,103	1/1:3,25:28:69.24:1287,69,0	1/1:5,10:15:27.09:504,27,0
chr10	68620681	.	ACC	A	10928.45	PASS	AB=1.000;AC=43;AF=0.768;AN=56;BaseQRankSum=9.642;DP=503;FS=12.733;HRun=9;HaplotypeScore=96.5320;InbreedingCoeff=0.9241;MQ=72.42;MQ0=0;MQRankSum=-5.022;QD=26.65;ReadPosRankSum=3.419;VQSLOD=3.4073;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:23:62.66:0,63,920	1/1:3,6:9:17.99:210,18,0	0/1:19,0:17:3.72:4,0,347	0/0:14,0:11:18.95:0,19,286	0/0:18,0:19:51.16:0,51,790	1/1:1,25:26:72.14:824,72,0	1/1:4,18:22:51.13:594,51,0	1/1:3,19:22:57.05:648,57,0	1/1:4,12:16:33.09:384,33,0	1/1:4,13:17:41.95:489,42,0	1/1:3,12:15:27.08:314,27,0	1/1:1,23:24:57.17:664,57,0	1/1:1,26:27:66.20:769,66,0	1/1:1,20:21:60.15:699,60,0	1/1:4,20:24:51.09:594,51,0	1/1:2,17:19:45.11:524,45,0	1/1:2,12:14:30.05:334,30,0	0/0:4,0:8:15.02:0,15,141	1/1:4,14:18:42.03:460,42,0	1/1:3,19:22:57.06:633,57,0	1/1:2,11:13:27.06:315,27,0	1/1:0,14:14:39.12:454,39,0	0/0:11,0:11:33.10:0,33,517	0/0:18,0:18:54.18:0,54,880	1/1:2,18:20:45.05:494,45,0	1/1:2,19:21:57.08:649,57,0	1/1:1,16:17:48.13:559,48,0	1/1:1,9:10:27.08:315,27,0
chr10	68621781	.	G	GTTGTAGATT	5729.71	PASS	AB=0.936;AC=10;AF=0.179;AN=56;BaseQRankSum=7.604;DP=485;FS=0.449;HRun=0;HaplotypeScore=175.5920;InbreedingCoeff=0.0328;MQ=86.49;MQ0=0;MQRankSum=-9.053;QD=38.45;ReadPosRankSum=-2.403;VQSLOD=4.3082;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:57.16:0,57,1655	0/0:12,0:12:36.12:0,36,772	0/0:15,0:15:45.14:0,45,1196	0/0:20,0:20:51.14:0,51,1444	0/0:19,0:19:43.07:0,43,1310	0/0:29,0:29:26.92:0,27,1366	0/1:15,0:15:6.77:7,0,722	0/1:20,0:20:2.66:3,0,853	0/0:13,0:13:31.99:0,32,702	0/0:14,0:14:42.12:0,42,767	0/0:10,0:10:5.10:0,5,523	0/0:18,0:18:27.19:0,27,1024	0/1:28,0:28:19.13:19,0,1341	0/0:13,0:13:15.21:0,15,748	0/0:12,0:12:36.11:0,36,728	0/0:16,0:16:20.17:0,20,932	0/0:29,0:29:62.27:0,62,1728	0/0:29,0:29:81.25:0,81,2490	1/1:11,1:12:14.76:1026,15,0	0/1:15,5:20:99:1269,0,256	0/1:8,0:8:43.22:409,0,43	0/0:19,0:19:48.16:0,48,1026	0/0:22,0:22:66.23:0,66,2119	0/0:7,0:7:21.05:0,21,611	0/1:7,0:7:45.94:46,0,190	0/0:19,0:19:54.14:0,54,1085	0/1:19,15:35:95.74:2938,0,96	0/1:4,0:4:13.96:14,0,182
chr10	68621782	.	C	CTTAGT	1896.66	PASS	AB=0.923;AC=8;AF=0.143;AN=56;BaseQRankSum=0.868;DP=479;FS=1.731;HRun=0;HaplotypeScore=137.0276;InbreedingCoeff=-0.1748;MQ=86.04;MQ0=0;MQRankSum=-3.804;QD=11.78;ReadPosRankSum=-3.314;VQSLOD=1.8780;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:57.18:0,57,1169	0/0:12,0:12:36.11:0,36,437	0/0:16,0:16:35.30:0,35,833	0/0:18,0:18:50.98:0,51,914	0/0:19,0:19:41.71:0,42,849	0/1:29,0:29:81.82:82,0,624	0/1:14,0:14:11.02:11,0,356	0/1:19,0:19:40.70:41,0,358	0/0:13,0:13:12.12:0,12,417	0/1:14,0:14:44.88:45,0,335	0/0:10,0:10:30.09:0,30,348	0/1:18,0:18:23.88:24,0,480	0/0:27,0:27:51.20:0,51,865	0/0:12,0:12:36.11:0,36,435	0/0:12,0:12:11.11:0,11,370	0/0:16,0:16:19.94:0,20,473	0/0:29,0:29:35.19:0,35,919	0/0:29,0:29:81.28:0,81,1756	0/1:11,1:12:42.87:43,0,262	0/1:15,5:20:99:452,0,172	0/0:7,0:7:14.64:0,15,112	0/0:19,0:19:18.07:0,18,460	0/0:22,0:22:66.23:0,66,1470	0/0:7,0:7:18.06:0,18,401	0/0:7,0:7:10.18:0,10,127	0/0:19,0:19:27.08:0,27,538	0/1:17,16:35:99:1334,0,202	0/0:4,0:4:8.92:0,9,107
chr10	68622130	.	TTTTTTTTC	T	4331.42	PASS	AB=1.000;AC=35;AF=0.625;AN=56;BaseQRankSum=10.913;DP=602;FS=2.579;HRun=0;HaplotypeScore=172.0237;InbreedingCoeff=0.8527;MQ=64.91;MQ0=9;MQRankSum=-10.027;QD=13.17;ReadPosRankSum=2.559;VQSLOD=4.1806;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,124,4192	1/1:4,0:4:6.02:77,6,0	0/0:31,0:12:11.72:0,12,297	0/1:28,0:17:2.16:2,0,235	0/0:29,0:28:51.17:0,51,1866	1/1:13,1:14:18.06:265,18,0	1/1:20,0:19:21.54:269,22,0	0/0:37,0:37:64.21:0,64,1907	1/1:13,2:16:27.13:340,27,0	0/0:20,0:20:36.42:0,36,1129	0/0:11,0:11:11.39:0,11,404	1/1:27,0:27:48.57:629,49,0	1/1:12,1:13:9.10:216,9,0	1/1:19,0:19:21.07:268,21,0	1/1:11,0:11:12.03:140,12,0	1/1:19,0:19:21.03:269,21,0	1/1:22,0:21:17.59:184,18,0	0/0:30,0:30:72.23:0,72,2560	1/1:16,2:18:15.01:261,15,0	1/1:23,1:24:23.84:230,24,0	0/0:8,0:8:0.30:0,0,0	1/1:15,0:15:12.36:119,12,0	0/0:21,0:21:45.14:0,45,1462	0/0:32,0:32:78.21:0,78,2743	1/1:10,1:11:21.39:259,21,0	1/1:27,1:28:36.03:378,36,0	1/1:29,0:29:32.28:387,32,0	1/1:10,0:9:3.01:38,3,0
chr10	68622131	.	TTTTTTTC	T	8134.17	PASS	AB=0.931;AC=40;AF=0.714;AN=56;BaseQRankSum=6.360;DP=604;FS=0.364;HRun=0;HaplotypeScore=146.3919;InbreedingCoeff=0.4640;MQ=64.69;MQ0=11;MQRankSum=-7.035;QD=18.66;ReadPosRankSum=-0.371;VQSLOD=4.1781;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,113,3890	1/1:0,4:4:6.02:135,6,0	0/1:33,0:12:8.34:8,0,249	0/1:29,0:17:17.26:17,0,279	0/0:30,0:28:66.05:0,66,1800	1/1:2,12:14:18.06:389,18,0	1/1:5,14:18:21.54:474,22,0	0/1:37,0:37:65.28:65,0,1534	1/1:16,2:18:49.34:664,49,0	0/1:20,0:20:6.45:6,0,912	0/1:11,0:11:23.42:23,0,313	1/1:6,21:27:32.24:1030,32,0	1/1:12,1:13:25.59:403,26,0	1/1:5,14:19:21.07:472,21,0	1/1:1,10:11:10.28:205,10,0	1/1:5,14:19:22.31:477,22,0	1/1:18,4:21:16.90:473,17,0	0/0:32,0:32:86.23:0,86,2421	1/1:16,2:18:38.88:523,39,0	1/1:8,14:22:4.72:454,5,0	1/1:6,1:7:10.58:77,11,0	1/1:5,10:15:22.47:284,22,0	0/0:21,0:21:50.92:0,51,1360	0/0:32,0:32:78.25:0,78,2508	1/1:9,2:11:31.50:398,32,0	1/1:7,21:28:26.55:739,27,0	1/1:6,23:29:39.91:760,40,0	0/1:3,7:9:34.72:59,0,35
chr10	68622132	.	TTTTTTC	T	6236.01	PASS	AB=0.994;AC=39;AF=0.696;AN=56;BaseQRankSum=9.390;DP=601;FS=1.170;HRun=0;HaplotypeScore=141.7259;InbreedingCoeff=0.3798;MQ=63.60;MQ0=12;MQRankSum=-7.261;QD=14.24;ReadPosRankSum=-1.210;VQSLOD=3.9557;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:98.48:0,98,3405	1/1:4,0:4:6.02:94,6,0	0/1:33,0:11:8.43:8,0,223	0/1:28,0:17:16.88:17,0,237	0/0:28,0:26:66.12:0,66,1613	1/1:13,0:13:18.06:280,18,0	1/1:19,0:18:21.96:331,22,0	0/1:37,0:37:99:240,0,1207	1/1:19,0:19:48.15:508,48,0	0/1:20,0:20:70.10:70,0,747	0/1:11,0:11:95.61:96,0,236	1/1:25,2:27:26.40:765,26,0	1/1:11,0:11:26.40:309,26,0	1/1:16,0:16:21.07:332,21,0	1/1:11,0:11:7.10:138,7,0	1/1:19,0:19:24.07:356,24,0	1/1:24,0:23:14.18:361,14,0	0/0:31,0:31:86.92:0,87,2130	1/1:19,0:19:44.18:392,44,0	0/1:21,1:22:8.54:326,0,9	1/1:9,0:9:5.23:43,5,0	1/1:14,1:15:18.43:184,18,0	0/0:20,0:20:50.92:0,51,1208	0/0:32,0:32:78.22:0,78,2179	1/1:11,1:12:30.59:323,31,0	1/1:28,0:28:8.58:502,9,0	1/1:29,0:29:39.26:523,39,0	0/1:11,0:9:37.97:38,0,46
chr10	68622140	.	TTTTTTC	T	2039.83	PASS	AB=0.964;AC=29;AF=0.518;AN=56;BaseQRankSum=12.954;DP=579;FS=10.161;HRun=0;HaplotypeScore=151.0295;InbreedingCoeff=0.3140;MQ=59.07;MQ0=13;MQRankSum=-10.050;QD=6.37;ReadPosRankSum=4.346;VQSLOD=1.7375;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,110,3674	1/1:4,0:4:5.36:22,5,0	0/0:31,0:9:11.70:0,12,250	0/1:26,0:13:30.88:31,0,191	0/0:26,0:24:54.17:0,54,1533	1/1:13,0:13:16.60:98,17,0	1/1:15,0:14:19.30:88,19,0	0/0:35,0:35:73.70:0,74,1807	0/1:17,2:19:0.20:279,0,0	0/0:19,0:19:19.73:0,20,994	0/1:14,0:13:2.40:2,0,490	1/1:25,1:26:36.54:288,37,0	1/1:9,2:11:0.35:172,0,0	0/1:15,1:16:9.07:98,0,9	0/1:12,0:12:19.02:47,0,19	1/1:15,1:16:19.30:102,19,0	0/1:22,1:22:13.07:66,0,13	0/0:34,0:34:87.23:0,87,2332	0/1:15,1:16:34.09:123,0,34	1/1:19,1:20:25.02:155,25,0	0/0:10,0:10:7.93:0,8,58	0/1:12,0:12:14.12:71,0,14	0/0:20,0:20:50.84:0,51,1250	0/0:31,0:31:84.24:0,84,2415	1/1:12,0:12:2.34:181,2,0	0/1:25,2:27:45.86:156,0,46	1/1:24,3:27:33.78:236,34,0	1/1:11,0:9:2.68:11,3,0
chr10	68623264	.	AAT	A	19452.84	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=11.677;DP=621;FS=4.112;HRun=0;HaplotypeScore=83.8459;InbreedingCoeff=0.9979;MQ=73.75;MQ0=1;MQRankSum=-0.656;QD=38.14;ReadPosRankSum=2.343;VQSLOD=6.7127;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:54.16:0,54,960	1/1:0,13:13:39.13:572,39,0	0/0:12,0:11:30.10:0,30,530	0/0:8,0:8:18.02:0,18,269	0/0:20,0:20:60.19:0,60,1091	1/1:1,25:26:57.19:839,57,0	1/1:0,11:11:27.09:398,27,0	1/1:0,37:37:99:1536,111,0	1/1:1,14:15:30.10:442,30,0	1/1:0,21:21:63.21:927,63,0	1/1:0,33:33:87.29:1280,87,0	1/1:3,31:34:87.29:1281,87,0	1/1:0,15:15:38.61:571,39,0	1/1:1,26:26:61.76:887,62,0	1/1:1,28:29:72.24:1060,72,0	1/1:1,37:38:96.32:1414,96,0	1/1:1,17:18:48.16:703,48,0	0/0:14,0:14:42.11:0,42,748	1/1:1,14:15:39.13:572,39,0	1/1:1,19:20:54.18:795,54,0	1/1:0,36:36:99:1457,99,0	1/1:0,16:16:45.15:663,45,0	0/0:12,0:12:36.11:0,36,643	0/0:25,0:25:75.24:0,75,1353	1/1:0,29:29:72.24:1060,72,0	1/1:2,26:28:78.26:1143,78,0	1/1:1,36:37:99:1457,99,0	1/1:0,12:12:27.09:397,27,0
chr10	68623585	.	G	GTT	1216.92	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-7.622;DP=619;FS=16.437;HRun=8;HaplotypeScore=74.5005;InbreedingCoeff=0.9967;MQ=78.78;MQ0=0;MQRankSum=-2.705;QD=33.80;ReadPosRankSum=-4.473;VQSLOD=1.4252;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:57.14:0,57,635	0/0:17,0:17:48.12:0,48,535	0/0:22,0:21:44.67:0,45,486	0/0:11,0:11:27.07:0,27,298	0/0:26,0:26:66.13:0,66,725	0/0:24,0:24:60.14:0,60,669	0/0:14,0:14:24.04:0,24,267	1/1:8,27:36:85.16:1312,85,0	0/0:18,0:18:48.12:0,48,535	0/0:22,0:22:57.12:0,57,623	0/0:36,0:36:93.23:0,93,1037	0/0:18,0:18:51.07:0,51,553	0/0:21,0:21:60.15:0,60,660	0/0:17,0:17:48.11:0,48,526	0/0:32,0:32:81.19:0,81,903	0/0:20,0:20:54.14:0,54,602	0/0:29,0:29:81.19:0,81,892	0/0:15,0:15:42.08:0,42,448	0/0:17,0:17:45.11:0,45,494	0/0:37,0:37:99:0,99,1081	0/0:16,0:16:42.10:0,42,468	0/0:22,0:22:63.17:0,63,702	0/0:23,0:23:63.16:0,63,702	0/0:14,0:14:42.11:0,42,468	0/0:23,0:23:66.18:0,66,736	0/0:26,0:26:72.17:0,72,795	0/0:24,0:24:56.97:0,57,693	0/0:16,0:17:39.04:0,39,493
chr10	68624735	.	CTT	C	16066.72	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=12.891;DP=675;FS=1.284;HRun=4;HaplotypeScore=93.9954;InbreedingCoeff=0.9999;MQ=85.28;MQ0=0;MQRankSum=-2.403;QD=39.67;ReadPosRankSum=6.246;VQSLOD=3.7865;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,102,1867	1/1:0,14:14:39.13:574,39,0	0/0:29,0:29:87.14:0,87,1460	0/0:19,0:19:51.16:0,51,896	0/0:23,0:23:69.19:0,69,1256	1/1:0,22:22:54.18:795,54,0	1/1:0,17:17:36.12:530,36,0	0/0:41,0:41:99:0,117,2155	1/1:0,13:13:36.12:530,36,0	0/0:38,0:38:99:0,108,1977	0/0:32,0:32:96.33:0,96,1793	1/1:0,27:27:72.24:1053,72,0	1/1:0,20:20:51.08:749,51,0	1/1:1,17:18:45.15:663,45,0	1/1:1,40:41:99:1723,117,0	1/1:0,23:23:63.21:928,63,0	1/1:2,17:19:48.16:707,48,0	0/0:17,0:17:51.17:0,51,955	1/1:2,20:22:60.19:860,60,0	1/1:0,26:26:75.25:1104,75,0	1/1:0,28:28:78.26:1149,78,0	1/1:0,31:31:81.27:1192,81,0	0/0:20,0:20:60.20:0,60,1095	0/0:16,0:16:45.15:0,45,843	1/1:0,17:17:45.15:659,45,0	1/1:1,30:31:90.30:1312,90,0	1/1:0,21:21:60.20:876,60,0	1/1:0,15:15:45.15:663,45,0
chr10	68625777	.	GTGTT	G	18378.35	PASS	AB=0.550;AC=35;AF=0.625;AN=56;BaseQRankSum=14.604;DP=641;FS=2.639;HRun=0;HaplotypeScore=135.1654;InbreedingCoeff=0.9233;MQ=79.78;MQ0=0;MQRankSum=-8.023;QD=45.16;ReadPosRankSum=5.056;VQSLOD=5.3972;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:48.12:0,48,1204	1/1:0,9:9:24.08:447,24,0	0/0:20,0:20:57.20:0,57,1363	0/0:17,0:17:45.14:0,45,1009	0/0:30,0:30:87.30:0,87,2266	1/1:1,28:29:75.26:1398,75,0	1/1:1,12:13:30.10:558,30,0	0/0:32,0:32:87.30:0,87,2263	1/1:1,14:15:36.12:671,36,0	0/0:40,0:40:99:0,117,3020	0/0:34,0:34:99:0,99,2567	1/1:2,24:26:66.23:1230,66,0	1/1:0,16:16:39.13:723,39,0	1/1:3,24:26:60.21:1114,60,0	1/1:2,27:29:78.27:1451,78,0	1/1:2,23:25:63.22:1171,63,0	1/1:1,20:21:51.65:950,52,0	0/0:13,0:13:33.11:0,33,847	1/1:2,16:18:51.14:887,51,0	1/1:1,25:26:54.18:1003,54,0	1/1:2,22:24:48.16:895,48,0	1/1:2,21:23:54.19:1006,54,0	0/0:15,0:15:45.15:0,45,1199	0/0:15,0:15:42.14:0,42,1120	1/1:0,29:29:78.27:1454,78,0	0/1:6,27:33:99:1353,0,150	1/1:0,32:32:81.28:1509,81,0	1/1:0,12:12:30.10:559,30,0
chr10	68626478	.	TG	T	6951.59	PASS	AB=0.882;AC=45;AF=0.804;AN=56;BaseQRankSum=4.345;DP=433;FS=17.466;HRun=12;HaplotypeScore=83.0777;InbreedingCoeff=0.5720;MQ=64.85;MQ0=0;MQRankSum=-2.932;QD=17.69;ReadPosRankSum=6.159;VQSLOD=4.2796;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:19,1:20:2.55:3,0,121	1/1:0,5:5:14.94:116,15,0	0/1:14,0:10:13.47:13,0,72	0/0:9,0:7:1.84:0,2,44	0/0:13,0:13:14.92:0,15,125	1/1:1,17:18:50.80:394,51,0	1/1:2,9:11:26.89:209,27,0	1/1:5,24:28:68.66:524,69,0	1/1:2,16:18:38.82:301,39,0	1/1:2,13:15:38.85:301,39,0	1/1:0,23:23:68.74:533,69,0	1/1:0,13:13:38.79:295,39,0	1/1:0,20:20:59.77:464,60,0	1/1:2,14:16:41.76:318,42,0	1/1:0,18:18:50.81:394,51,0	1/1:4,11:15:35.67:268,36,0	1/1:4,16:21:43.81:324,44,0	0/1:5,2:9:13.89:63,0,14	1/1:4,12:16:35.74:266,36,0	1/1:2,17:20:46.67:344,47,0	1/1:4,25:29:77.61:601,78,0	1/1:0,3:3:8.97:69,9,0	0/0:4,0:4:3.01:0,3,30	0/0:14,0:14:8.21:0,8,108	1/1:2,11:13:29.88:232,30,0	1/1:1,12:13:32.68:245,33,0	1/1:3,27:30:77.65:603,78,0	1/1:1,3:4:8.97:69,9,0
chr10	68629265	.	GATAAGAGT	G	21183.06	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=16.874;DP=606;FS=1.026;HRun=0;HaplotypeScore=169.2727;InbreedingCoeff=0.9892;MQ=71.78;MQ0=0;MQRankSum=-17.706;QD=60.18;ReadPosRankSum=4.028;VQSLOD=4.9334;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:93.31:0,93,3795	1/1:0,9:9:21.07:542,21,0	0/0:23,0:25:69.22:0,69,2498	0/0:21,0:21:60.20:0,60,2375	0/0:32,0:32:90.31:0,90,3908	1/1:2,17:19:39.13:1079,39,0	1/1:1,15:16:33.11:922,33,0	0/0:40,0:40:99:0,111,4703	1/1:1,22:23:51.17:1379,51,0	0/0:31,0:31:90.29:0,90,3600	0/0:28,0:28:84.29:0,84,3649	1/1:0,21:21:57.20:1593,57,0	1/1:1,30:31:81.28:2262,81,0	1/1:3,23:26:60.02:1650,60,0	1/1:6,24:30:54.18:1434,54,0	1/1:0,15:15:39.13:1090,39,0	1/1:3,8:11:15.05:419,15,0	0/0:7,0:7:21.03:0,21,811	1/1:0,14:14:42.09:906,42,0	1/1:0,29:29:60.14:1600,60,0	1/1:2,15:17:17.24:473,17,0	1/1:1,10:11:18.06:457,18,0	0/0:14,0:14:39.13:0,39,1643	0/0:25,0:25:75.26:0,75,3299	1/1:1,14:15:36.12:960,36,0	1/1:2,24:26:72.24:1912,72,0	1/1:2,27:29:78.27:2170,78,0	1/1:0,10:10:12.04:335,12,0
chr10	68630686	.	A	AT	7174.25	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-10.117;DP=454;FS=2.860;HRun=10;HaplotypeScore=50.1549;InbreedingCoeff=0.8702;MQ=79.08;MQ0=1;MQRankSum=-0.948;QD=21.16;ReadPosRankSum=1.519;VQSLOD=5.7946;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:41.78:0,42,330	1/1:2,9:11:21.05:224,21,0	0/0:17,0:16:19.28:0,19,179	0/0:24,0:15:26.82:0,27,175	0/0:26,0:26:68.80:0,69,551	1/1:2,24:26:57.14:607,57,0	1/1:0,3:3:6.02:64,6,0	1/1:9,18:28:56.94:573,57,0	1/1:0,16:17:44.98:462,45,0	1/1:1,14:15:39.08:408,39,0	1/1:2,17:19:26.37:450,26,0	1/1:1,15:17:35.88:365,36,0	1/1:4,9:13:18:192,18,0	1/1:3,15:18:36.09:384,36,0	1/1:3,17:20:33.08:352,33,0	1/1:5,15:20:8.44:295,8,0	1/1:0,11:11:30.08:320,30,0	1/1:3,8:11:9.01:96,9,0	1/1:7,11:18:33.08:352,33,0	1/1:2,17:19:41.91:396,42,0	1/1:0,8:8:21.05:224,21,0	1/1:0,3:3:6.02:64,6,0	0/0:13,0:13:38.94:0,39,318	0/0:10,1:11:0.94:0,1,208	1/1:0,13:13:36.09:384,36,0	1/1:5,16:21:26.42:460,26,0	1/1:3,20:23:38.75:407,39,0	1/1:1,4:5:9.02:96,9,0
chr10	68631444	.	CTT	C	7689.45	PASS	AB=1.000;AC=43;AF=0.768;AN=56;BaseQRankSum=3.636;DP=544;FS=1.981;HRun=14;HaplotypeScore=72.1789;InbreedingCoeff=0.8645;MQ=68.05;MQ0=1;MQRankSum=1.379;QD=18.01;ReadPosRankSum=5.438;VQSLOD=4.3046;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:13:30.05:0,30,373	1/1:3,5:8:11.99:111,12,0	0/0:10,0:9:20.25:0,20,209	0/1:10,0:8:7.38:7,0,66	0/0:38,0:41:86.72:0,87,1092	1/1:2,15:17:39.01:360,39,0	1/1:2,7:9:8.99:83,9,0	1/1:10,0:27:42.50:186,43,0	1/1:1,16:17:30.02:278,30,0	1/1:5,20:26:62.69:560,63,0	1/1:6,26:37:58.72:635,59,0	1/1:1,23:24:57.06:528,57,0	1/1:2,13:15:14.13:308,14,0	1/1:5,10:16:29.70:262,30,0	1/1:3,15:20:32.61:336,33,0	1/1:3,15:20:35.62:363,36,0	1/1:3,27:30:72.07:666,72,0	0/0:9,0:9:12.95:0,13,139	1/1:10,12:22:38.62:336,39,0	1/1:5,21:26:59.98:554,60,0	1/1:0,15:15:39.04:361,39,0	1/1:4,12:16:32.97:305,33,0	0/0:33,0:33:78.08:0,78,1002	0/0:7,0:11:23.29:0,23,246	1/1:3,13:17:4.95:272,5,0	1/1:2,24:27:71.74:650,72,0	1/1:4,16:20:41.98:389,42,0	1/1:2,6:8:15.01:139,15,0
chr10	68633154	.	GGT	G	594.50	PASS	AB=0.995;AC=13;AF=0.232;AN=56;BaseQRankSum=7.760;DP=644;FS=29.403;HRun=0;HaplotypeScore=111.9359;InbreedingCoeff=-0.1739;MQ=62.29;MQ0=14;MQRankSum=-3.986;QD=2.21;ReadPosRankSum=-4.230;VQSLOD=-0.6560;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:69.41:0,69,999	0/1:4,0:4:4.42:4,0,49	0/1:55,0:17:14.28:14,0,220	0/0:54,0:25:7.50:0,8,116	0/0:49,1:49:94.24:0,94,1470	0/1:20,0:20:63.03:63,0,278	0/0:13,0:13:4.23:0,4,191	0/0:39,0:38:74.13:0,74,892	0/0:21,0:20:22.55:0,23,360	1/1:37,2:39:1.28:332,1,0	0/1:16,1:17:26.65:101,0,27	0/0:15,0:14:38.95:0,39,501	0/0:16,0:16:26.93:0,27,279	0/1:20,0:20:16.25:16,0,345	0/0:11,0:11:18.03:0,18,210	0/0:12,0:12:30.04:0,30,352	0/0:31,0:31:47.09:0,47,654	0/1:19,0:19:18.30:18,0,366	0/1:20,0:20:67.88:68,0,375	0/1:27,0:26:27.40:27,0,477	0/0:6,0:6:13.24:0,13,170	0/1:11,0:10:7.47:7,0,298	0/0:22,0:22:62.88:0,63,801	0/0:9,0:9:20.27:0,20,305	0/0:22,0:21:12.45:0,12,328	0/1:27,0:27:34.57:35,0,519	0/0:28,0:28:36.69:0,37,478	0/1:10,0:10:38.92:54,0,39
chr10	68633155	.	G	GTTTTTTTT	7355.33	PASS	AB=0.965;AC=46;AF=0.821;AN=56;BaseQRankSum=0.695;DP=658;FS=7.441;HRun=17;HaplotypeScore=163.9269;InbreedingCoeff=0.5792;MQ=62.14;MQ0=15;MQRankSum=-6.811;QD=13.42;ReadPosRankSum=-2.599;VQSLOD=0.4559;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:27:27.58:0,28,721	1/1:5,0:5:9.03:173,9,0	0/1:56,0:17:6.55:7,0,92	0/1:50,0:25:5.04:5,0,96	0/0:43,0:49:69.75:0,70,1092	1/1:20,0:20:27.09:563,27,0	1/1:13,0:13:9.03:186,9,0	1/1:40,0:39:40.68:734,41,0	1/1:11,0:22:9.97:265,10,0	1/1:39,0:40:68.49:671,68,0	1/1:15,0:16:35.93:353,36,0	1/1:15,0:14:6.02:160,6,0	1/1:8,0:17:3.01:106,3,0	1/1:20,0:20:24.55:436,25,0	1/1:4,6:10:3.01:112,3,0	1/1:10,3:14:2.61:112,3,0	1/1:19,0:33:6.49:189,6,0	1/1:19,0:19:18.95:362,19,0	1/1:20,0:20:27.05:533,27,0	1/1:26,0:26:18.06:383,18,0	1/1:6,0:6:5.23:42,5,0	1/1:10,0:9:15.52:329,16,0	0/0:18,0:24:35.21:0,35,578	0/0:6,0:9:4.43:0,4,239	1/1:8,13:20:12.04:319,12,0	1/1:26,0:26:42.11:875,42,0	1/1:14,15:31:10.85:224,11,0	1/1:10,0:10:12.04:216,12,0
chr10	68633160	.	T	TG	610.39	PASS	AB=0.630;AC=3;AF=0.054;AN=56;BaseQRankSum=7.695;DP=649;FS=4.550;HRun=0;HaplotypeScore=109.7084;InbreedingCoeff=0.6640;MQ=62.62;MQ0=15;MQRankSum=-5.681;QD=10.17;ReadPosRankSum=4.329;VQSLOD=3.4944;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:71.25:0,71,822	0/0:5,0:5:14.84:0,15,111	0/0:62,0:18:31.53:0,32,317	0/0:56,0:26:14.56:0,15,140	0/0:50,0:49:99:0,135,1388	0/0:18,0:18:33.18:0,33,223	0/0:13,0:13:23.41:0,23,157	0/0:37,0:36:88.64:0,89,685	0/0:22,0:21:32.59:0,33,251	1/1:27,16:43:36.76:560,37,0	0/1:7,10:17:7.48:156,0,7	0/0:13,0:12:32.67:0,33,234	0/0:16,0:16:20.73:0,21,151	0/0:19,0:19:50.41:0,50,367	0/0:10,0:10:14.74:0,15,101	0/0:11,0:11:20.70:0,21,143	0/0:34,0:33:51.51:0,52,348	0/0:18,0:18:47:0,47,330	0/0:17,0:17:47.33:0,47,341	0/0:26,0:25:58.79:0,59,424	0/0:6,0:6:14.25:0,14,92	0/0:10,0:9:26.70:0,27,191	0/0:24,0:24:64.59:0,65,619	0/0:8,0:8:17.79:0,18,178	0/0:22,0:21:27.89:0,28,190	0/0:24,0:24:63.15:0,63,490	0/0:30,0:30:41.50:0,41,297	0/0:11,0:11:14.25:0,14,83
chr10	68633163	.	T	TTTTG	2066.49	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=10.078;DP=625;FS=4.710;HRun=0;HaplotypeScore=123.9916;InbreedingCoeff=-0.1503;MQ=61.92;MQ0=15;MQRankSum=-3.604;QD=7.51;ReadPosRankSum=4.152;VQSLOD=1.9314;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:71.53:0,72,951	0/1:4,0:4:5.05:5,0,37	0/0:64,0:19:38.26:0,38,386	0/0:53,0:23:5.10:0,5,108	0/0:49,0:48:99:0,126,1528	0/1:17,0:17:11:11,0,74	0/1:13,0:13:21.37:21,0,62	0/1:36,0:35:60.70:61,0,247	0/1:21,0:20:28.87:29,0,105	1/1:25,16:41:68.45:1351,68,0	1/1:6,10:16:39.65:623,40,0	0/0:12,0:11:12.01:0,12,127	0/1:15,0:15:9.61:10,0,71	0/1:15,0:15:27.28:27,0,75	0/1:9,0:9:12.75:13,0,48	0/1:10,0:10:6.81:7,0,82	0/0:33,0:32:5.44:0,5,285	0/1:17,0:17:10.12:10,0,143	0/0:18,0:18:32.32:0,32,230	0/0:23,0:22:7.59:0,8,193	0/0:6,0:6:0.15:0,0,50	0/1:10,0:9:17.36:17,0,77	0/0:24,0:24:66.06:0,66,750	0/0:8,0:8:20.97:0,21,250	0/0:22,0:21:0.04:0,0,124	0/1:23,0:23:20.54:21,0,137	0/1:28,0:28:20.49:20,0,152	0/0:11,0:11:6.32:0,6,48
chr10	68633312	.	TC	T	11729.41	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=10.157;DP=558;FS=1.164;HRun=5;HaplotypeScore=81.6880;InbreedingCoeff=0.9988;MQ=73.54;MQ0=0;MQRankSum=-4.452;QD=29.55;ReadPosRankSum=2.123;VQSLOD=5.3517;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,105,1391	1/1:1,7:8:21.06:238,21,0	0/0:25,0:24:63.18:0,63,813	0/0:22,0:21:48.13:0,48,583	0/0:21,0:21:63.21:0,63,861	1/1:1,18:19:45.13:510,45,0	1/1:1,20:21:54.10:597,54,0	1/1:5,22:27:66.12:716,66,0	1/1:1,18:19:39.11:442,39,0	1/1:1,11:12:33.09:367,33,0	1/1:0,13:13:39.11:442,39,0	1/1:0,25:25:72.21:816,72,0	1/1:2,15:17:42.12:476,42,0	1/1:1,11:12:30.09:340,30,0	1/1:1,18:19:45.13:510,45,0	1/1:0,15:15:39.11:442,39,0	1/1:0,25:25:66.19:749,66,0	0/0:18,0:18:48.16:0,48,656	1/1:2,16:18:48.12:534,48,0	1/1:0,21:21:57.16:646,57,0	1/1:2,43:45:99:1395,123,0	1/1:0,10:10:30.09:340,30,0	0/0:11,0:11:30.10:0,30,410	0/0:24,0:24:69.19:0,69,920	1/1:0,15:15:45.13:511,45,0	1/1:1,22:23:66.17:737,66,0	1/1:1,21:22:48.14:544,48,0	1/1:0,11:11:33.09:374,33,0
chr10	68633587	.	CCCTGCATGGAAAA	C	2708.17	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=10.097;DP=588;FS=6.010;HRun=0;HaplotypeScore=211.6860;InbreedingCoeff=0.9874;MQ=82.95;MQ0=0;MQRankSum=-7.254;QD=67.70;ReadPosRankSum=-4.354;VQSLOD=2.0432;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:45.15:0,45,2859	0/0:11,0:11:30.09:0,30,1833	0/0:24,0:24:69.19:0,69,3366	0/0:13,0:13:36.10:0,36,1631	0/0:40,0:40:99:0,120,7027	0/0:24,0:24:69.19:0,69,3901	0/0:13,0:13:39.13:0,39,2556	1/1:0,40:40:99:2803,120,0	0/0:15,0:15:45.11:0,45,2559	0/0:19,0:19:57.19:0,57,3518	0/0:20,0:20:60.18:0,60,3536	0/0:18,0:18:54.15:0,54,3057	0/0:18,0:18:54.17:0,54,3437	0/0:24,0:24:66.23:0,66,4128	0/0:28,0:28:81.23:0,81,4488	0/0:25,0:25:75.24:0,75,4740	0/0:16,0:16:48.14:0,48,2859	0/0:19,0:19:57.17:0,57,3156	0/0:19,0:19:57.16:0,57,2994	0/0:30,0:30:90.31:0,90,5475	0/0:19,0:19:57.18:0,57,3417	0/0:25,0:25:75.20:0,75,4188	0/0:23,0:23:66.23:0,66,4364	0/0:7,0:7:21.03:0,21,1110	0/0:23,0:23:66.23:0,66,4138	0/0:20,0:20:60.17:0,60,3139	0/0:34,0:34:99:0,102,5720	0/0:6,0:6:18.06:0,18,1127
chr10	68635569	.	CTG	C	324.40	PASS	AB=0.983;AC=26;AF=0.591;AN=44;BaseQRankSum=1.796;DP=640;FS=17.191;HRun=0;HaplotypeScore=92.7772;InbreedingCoeff=0.2725;MQ=59.55;MQ0=36;MQRankSum=1.089;QD=0.96;ReadPosRankSum=2.820;VQSLOD=0.5719;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:33:44.80:47,0,45	1/1:9,0:8:5.95:41,6,0	./.	./.	0/1:20,0:19:40.63:41,0,87	./.	./.	./.	1/1:16,0:15:5.51:40,6,0	0/0:13,0:13:8.58:0,9,50	1/1:16,0:13:0.47:1,0,0	0/0:19,0:19:0:0,0,0	1/1:16,0:16:0.78:2,1,0	0/0:22,0:22:0.84:0,1,19	0/1:17,0:18:0.01:0,0,0	0/0:28,0:24:7.87:0,8,155	1/1:31,0:28:2.97:20,3,0	0/0:19,0:18:5.96:0,6,42	1/1:15,0:14:2.97:20,3,0	0/1:19,0:19:0:0,0,0	1/1:44,0:42:17.45:113,17,0	./.	0/0:10,4:15:5.88:0,6,38	0/1:25,0:23:21.18:21,0,178	0/1:19,0:17:0:0,0,0	1/1:30,0:28:5.92:39,6,0	1/1:14,0:12:8.90:60,9,0	1/1:11,0:10:0.80:4,1,0
chr10	68635618	.	TGTGTGTGA	T	2482.07	PASS	AB=1.000;AC=24;AF=0.429;AN=56;BaseQRankSum=6.859;DP=583;FS=8.589;HRun=0;HaplotypeScore=136.3466;InbreedingCoeff=0.4903;MQ=52.33;MQ0=48;MQRankSum=2.683;QD=8.11;ReadPosRankSum=-0.588;VQSLOD=2.0741;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:32:67.56:0,68,1077	1/1:10,0:10:20.53:198,21,0	0/0:28,0:6:18.02:0,18,176	0/0:18,0:10:19.34:0,19,184	0/0:17,0:16:42.02:0,42,1056	0/0:18,0:18:0:0,0,0	1/1:26,0:20:41.34:363,41,0	0/0:20,0:20:50.91:0,51,441	1/1:18,0:17:28.95:270,29,0	0/1:15,0:12:1.01:1,0,459	0/0:12,0:9:2.37:0,2,8	0/0:21,0:21:5.59:0,6,35	0/1:24,0:24:14.49:20,0,14	0/1:25,0:25:27.75:28,0,173	0/0:25,0:24:3.93:0,4,26	0/1:22,0:18:58.06:58,0,642	0/1:30,0:26:13.96:177,0,14	0/0:15,0:14:24.69:0,25,274	1/1:10,0:9:16.15:126,16,0	1/1:15,0:13:5.09:47,5,0	1/1:40,0:38:32.36:613,32,0	0/0:4,13:15:2.88:0,3,15	0/0:21,0:20:30.48:0,30,439	0/0:32,0:27:51.34:0,51,1290	0/1:14,0:12:0.01:0,0,0	1/1:29,0:27:33.47:503,33,0	1/1:16,0:14:29.60:226,30,0	1/1:12,0:8:1.05:37,1,0
chr10	68635620	.	TGTGTGA	T	2862.11	PASS	AB=0.735;AC=25;AF=0.446;AN=56;BaseQRankSum=5.622;DP=567;FS=4.709;HRun=0;HaplotypeScore=121.9187;InbreedingCoeff=0.6247;MQ=53.63;MQ0=44;MQRankSum=2.630;QD=9.67;ReadPosRankSum=-0.916;VQSLOD=2.4281;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:30:62.88:0,63,798	1/1:10,0:10:20.95:251,21,0	0/0:28,0:6:18.02:0,18,176	0/0:19,0:11:21.34:0,21,200	0/0:17,0:16:22.44:0,22,761	0/0:2,16:18:0:0,0,0	1/1:26,0:20:41.47:384,41,0	0/0:21,0:21:53.91:0,54,469	1/1:17,0:16:28.85:321,29,0	0/0:15,0:12:15.47:0,15,335	0/0:11,0:9:2.80:0,3,13	0/0:6,13:19:2.60:0,3,10	0/1:5,19:24:0.52:39,0,1	0/1:6,17:23:42.60:43,0,121	0/0:7,18:24:2.98:0,3,26	0/1:22,0:19:99:103,0,395	1/1:17,0:26:25.82:206,26,0	0/0:14,0:13:20.56:0,21,206	1/1:3,6:9:17.28:168,17,0	1/1:10,5:13:5.40:48,5,0	1/1:38,0:36:59.02:650,59,0	0/1:17,0:15:0:0,0,0	0/0:21,0:20:32.83:0,33,369	0/0:32,0:27:25.38:0,25,963	0/1:2,11:11:0.02:0,0,0	1/1:29,0:27:46.50:483,47,0	1/1:15,0:13:29.92:298,30,0	1/1:4,4:5:2.12:57,2,0
chr10	68635624	.	T	TGAGAGAGAGAGA	795.84	PASS	AC=2;AF=0.038;AN=52;BaseQRankSum=1.396;DP=572;FS=4.934;HRun=0;HaplotypeScore=185.6031;InbreedingCoeff=0.5442;MQ=54.94;MQ0=39;MQRankSum=-4.789;QD=44.21;ReadPosRankSum=-3.510;VQSLOD=2.7789;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:54.16:0,54,1892	0/0:9,0:9:15.05:0,15,469	0/0:29,0:7:21.03:0,21,632	0/0:20,0:12:26.72:0,27,640	0/0:18,0:17:33.11:0,33,993	./.	0/0:25,0:20:42.14:0,42,1301	0/0:23,0:23:11.75:0,12,706	0/0:17,0:16:13.51:0,14,855	1/1:13,4:15:24.55:887,25,0	0/0:7,7:12:0:0,0,0	0/0:19,0:19:3.09:0,3,104	0/0:23,0:23:2.97:0,3,46	0/0:22,0:22:8.87:0,9,270	0/0:25,0:24:3.01:0,3,106	0/0:22,0:20:38.66:0,39,1108	0/0:29,0:25:27.56:0,28,850	0/0:14,0:13:17.99:0,18,288	0/0:9,0:9:15.04:0,15,350	0/0:17,0:15:12.04:0,12,288	0/0:40,0:38:46.38:0,46,1712	./.	0/0:22,0:21:32.31:0,32,1026	0/0:31,0:26:40.35:0,40,1444	0/0:12,0:11:0.47:0,0,1	0/0:30,0:28:51.07:0,51,1560	0/0:14,0:13:20.67:0,21,676	0/0:7,0:5:5.38:0,5,70
chr10	68636134	.	A	ACCTGT	39171.96	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=-12.213;DP=724;FS=15.675;HRun=0;HaplotypeScore=116.7102;InbreedingCoeff=0.9978;MQ=69.64;MQ0=0;MQRankSum=-7.465;QD=72.01;ReadPosRankSum=1.500;VQSLOD=5.6595;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,123,2516	1/1:5,3:8:18.06:501,18,0	0/0:28,0:28:75.25:0,75,1472	0/0:27,0:24:69.23:0,69,1410	0/0:30,0:30:87.09:0,87,1785	1/1:7,19:27:66.23:2044,66,0	1/1:8,15:24:54.19:1668,54,0	1/1:14,24:37:99:2751,99,0	1/1:4,17:21:57.19:1709,57,0	1/1:7,16:26:75.17:1962,75,0	1/1:4,13:17:42.14:1298,42,0	1/1:4,19:23:57.20:1765,57,0	1/1:3,23:26:66.23:2043,66,0	1/1:7,28:37:96.33:2910,96,0	1/1:5,27:33:75.21:2267,75,0	1/1:4,24:29:75.26:2316,75,0	1/1:2,21:24:48.03:1486,48,0	0/0:22,0:21:57.20:0,57,1182	1/1:12,13:24:54.15:1559,54,0	1/1:4,23:29:66.23:2045,66,0	1/1:13,26:40:56.25:2302,56,0	1/1:3,13:15:39.13:1206,39,0	0/0:13,0:13:39.13:0,39,803	0/0:16,0:16:45.15:0,45,945	1/1:8,20:30:66.23:2031,66,0	1/1:7,32:39:99:3104,102,0	1/1:3,19:22:51.18:1556,51,0	1/1:1,8:9:21.07:650,21,0
chr10	68636329	.	AC	A	12386.23	PASS	AB=0.518;AC=35;AF=0.625;AN=56;BaseQRankSum=12.754;DP=534;FS=2.781;HRun=1;HaplotypeScore=53.7137;InbreedingCoeff=0.9296;MQ=76.47;MQ0=0;MQRankSum=-1.544;QD=38.59;ReadPosRankSum=2.530;VQSLOD=5.4649;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:87.28:0,87,1363	1/1:0,9:9:27.09:378,27,0	0/0:14,0:14:21.31:0,21,287	0/0:11,0:11:29.73:0,30,372	0/0:24,0:24:72.25:0,72,1151	1/1:0,19:19:57.15:768,57,0	1/1:0,21:21:57.19:797,57,0	0/0:27,0:27:81.25:0,81,1251	1/1:0,13:13:39.09:523,39,0	0/0:26,0:26:78.23:0,78,1201	0/0:23,0:23:69.24:0,69,1102	1/1:0,17:17:51.17:713,51,0	1/1:0,18:18:39.13:543,39,0	1/1:0,20:20:54.18:755,54,0	1/1:0,15:15:36.12:503,36,0	1/1:0,22:22:66.22:922,66,0	1/1:0,21:21:63.16:858,63,0	0/0:16,0:16:48.16:0,48,767	1/1:0,23:23:69.21:946,69,0	1/1:0,26:26:75.18:1025,75,0	1/1:0,13:13:36.12:503,36,0	1/1:0,8:8:18.06:252,18,0	0/0:19,0:19:54.18:0,54,863	0/0:22,0:22:66.20:0,66,1018	1/1:0,18:18:54.18:755,54,0	0/1:2,27:29:8.68:1034,0,9	1/1:0,23:23:63.18:859,63,0	1/1:0,6:6:18.06:252,18,0
chr10	68636478	.	TA	T	1237.69	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-0.694;DP=554;FS=5.204;HRun=1;HaplotypeScore=118.5801;InbreedingCoeff=0.8809;MQ=72.05;MQ0=0;MQRankSum=0.935;QD=22.10;ReadPosRankSum=-0.227;VQSLOD=3.4617;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:72.17:0,72,1016	0/0:8,0:8:19.65:0,20,140	0/0:13,0:13:8.63:0,9,331	0/0:14,0:14:22.14:0,22,354	0/0:29,0:29:87.26:0,87,1233	0/0:16,0:16:41.46:0,41,277	0/0:14,0:14:35.42:0,35,231	0/0:35,0:35:84.36:0,84,520	0/0:14,0:14:41.54:0,42,282	1/1:6,24:30:72.14:726,72,0	1/1:2,24:26:63.12:633,63,0	0/0:24,0:24:56.08:0,56,371	0/0:23,0:23:65.18:0,65,433	0/0:14,0:14:35.56:0,36,241	0/0:11,0:11:29.58:0,30,196	0/0:21,0:21:62.21:0,62,418	0/0:22,0:22:62.31:0,62,427	0/0:19,0:19:57.10:0,57,750	0/0:17,0:16:40.97:0,41,259	0/0:33,0:33:88.95:0,89,617	0/0:6,0:6:17.76:0,18,115	0/0:14,0:14:38.51:0,39,256	0/0:13,0:13:39.05:0,39,507	0/0:15,0:15:45.13:0,45,636	0/0:19,0:19:46.79:0,47,301	0/0:32,3:35:2.96:0,3,410	0/0:33,0:33:95.03:0,95,664	0/0:12,0:12:35.74:0,36,261
chr10	68636708	.	CT	C	6984.93	PASS	AB=0.903;AC=44;AF=0.786;AN=56;BaseQRankSum=9.205;DP=565;FS=4.371;HRun=11;HaplotypeScore=62.0535;InbreedingCoeff=0.8264;MQ=69.62;MQ0=2;MQRankSum=0.383;QD=14.83;ReadPosRankSum=1.917;VQSLOD=5.5480;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:35,4:39:2.35:2,0,792	1/1:1,7:10:21.92:159,22,0	0/1:8,1:9:9.67:10,0,94	0/0:11,0:11:12.93:0,13,106	0/0:23,0:24:62.94:0,63,624	1/1:2,20:24:35.01:472,35,0	1/1:2,16:17:44.95:369,45,0	1/1:8,19:28:58.92:472,59,0	1/1:1,16:17:47.94:394,48,0	1/1:7,0:29:39.89:114,40,0	1/1:1,0:19:34.62:100,35,0	1/1:6,17:23:38.94:320,39,0	1/1:4,23:28:61.96:498,62,0	1/1:4,20:24:27.93:436,28,0	1/1:4,14:19:12.18:251,12,0	1/1:4,17:21:44.94:369,45,0	1/1:1,20:21:50.93:419,51,0	0/0:24,0:24:45.11:0,45,479	1/1:6,9:14:26.93:219,27,0	1/1:5,13:19:34.96:276,35,0	1/1:0,19:20:46.99:375,47,0	1/1:1,7:9:26.01:203,26,0	0/0:14,1:15:17.30:0,17,372	0/0:19,0:19:51.13:0,51,544	1/1:3,18:22:49.97:400,50,0	1/1:2,21:23:65.89:535,66,0	1/1:5,20:25:27.95:436,28,0	1/1:1,6:8:20.02:154,20,0
chr10	68637499	.	CT	C	1093.74	PASS	AB=0.816;AC=34;AF=0.680;AN=50;BaseQRankSum=2.201;DP=355;FS=1.333;HRun=14;HaplotypeScore=59.8723;InbreedingCoeff=0.3740;MQ=36.86;MQ0=52;MQRankSum=-3.882;QD=4.88;ReadPosRankSum=1.612;VQSLOD=1.7447;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:28,3:20:18.81:19,0,122	1/1:2,7:9:11.87:82,12,0	./.	./.	0/1:18,1:18:17.88:18,0,161	1/1:1,5:7:13.93:88,14,0	1/1:3,7:10:12.93:73,13,0	0/0:8,0:7:13.75:0,14,78	1/1:4,2:5:5.94:41,6,0	0/1:8,1:11:3.93:4,0,60	0/0:4,0:10:20.10:0,20,105	1/1:3,1:4:5.91:40,6,0	1/1:2,2:4:3.44:22,3,0	1/1:1,7:7:8.88:61,9,0	0/1:7,4:10:24.36:63,0,24	1/1:4,4:6:11.89:82,12,0	1/1:10,16:26:1.71:106,2,0	0/0:21,0:20:27.93:0,28,139	1/1:3,6:7:9.84:95,10,0	1/1:5,8:13:19.28:128,19,0	0/1:1,1:2:14.57:15,0,22	1/1:5,1:7:9.98:51,10,0	0/0:13,0:12:14.56:0,15,112	0/0:23,0:18:33.04:0,33,306	1/1:3,6:8:17.84:123,18,0	1/1:2,4:7:13.90:88,14,0	0/1:7,3:9:4.45:67,0,4	./.
chr10	68637511	.	T	TA	164.80	PASS	AB=0.824;AC=2;AF=0.040;AN=50;BaseQRankSum=-3.296;DP=360;FS=2.491;HRun=0;HaplotypeScore=55.6862;InbreedingCoeff=-0.0404;MQ=33.37;MQ0=57;MQRankSum=0.723;QD=4.85;ReadPosRankSum=0.293;VQSLOD=3.0034;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:22:41.64:0,42,354	0/0:9,0:9:11.83:0,12,78	./.	./.	0/0:23,0:20:47.69:0,48,445	0/0:10,0:8:17.70:0,18,115	0/0:13,0:10:17.66:0,18,114	0/0:9,0:5:5.77:0,6,51	0/0:6,0:5:11.87:0,12,80	0/0:13,0:11:17.68:0,18,147	0/1:10,0:9:8.77:9,0,24	0/0:5,0:5:8.90:0,9,60	0/0:3,0:3:5.93:0,6,40	0/0:8,0:7:11.47:0,11,83	0/0:12,0:11:20.07:0,20,148	0/0:8,0:5:11.83:0,12,78	0/0:26,0:21:34.83:0,35,233	0/1:11,12:19:14.76:237,0,15	0/0:10,0:8:23.67:0,24,174	0/0:14,0:13:35.43:0,35,227	0/0:6,0:3:5.97:0,6,61	0/0:7,0:5:11.74:0,12,73	0/0:10,0:9:17.96:0,18,201	0/0:27,0:18:36.05:0,36,467	0/0:9,0:8:17.76:0,18,117	0/0:9,0:9:23.69:0,24,160	0/0:10,0:9:22.83:0,23,150	./.
chr10	68637518	.	CT	C	1432.59	PASS	AB=0.851;AC=38;AF=0.760;AN=50;BaseQRankSum=4.285;DP=333;FS=4.772;HRun=10;HaplotypeScore=46.9459;InbreedingCoeff=0.5520;MQ=32.32;MQ0=48;MQRankSum=-4.765;QD=7.54;ReadPosRankSum=0.183;VQSLOD=1.1176;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:20:26.94:0,27,280	1/1:1,5:7:11.95:97,12,0	./.	./.	0/0:26,0:23:44.02:0,44,437	1/1:2,7:8:17.03:136,17,0	1/1:10,3:8:5.99:52,6,0	0/0:8,0:6:8.56:0,9,44	1/1:4,1:4:2.97:26,3,0	1/1:6,6:10:20.98:180,21,0	1/1:4,6:9:5.96:52,6,0	1/1:3,2:5:5.99:50,6,0	1/1:2,1:3:2.91:26,3,0	1/1:3,3:5:9:77,9,0	0/1:8,2:10:24.34:42,0,24	1/1:5,3:5:9:78,9,0	1/1:19,7:20:23.98:207,24,0	0/0:21,0:16:11.15:0,11,160	1/1:7,5:9:8.99:78,9,0	1/1:4,10:13:17.26:155,17,0	1/1:2,4:3:6:52,6,0	1/1:1,3:3:9:78,9,0	0/1:10,1:10:11.12:11,0,101	0/0:25,0:16:36.10:0,36,398	1/1:4,5:8:8.97:73,9,0	1/1:7,3:9:8.97:78,9,0	1/1:7,1:7:5.98:51,6,0	./.
chr10	68637553	.	C	CCTTG	1682.38	PASS	AB=0.817;AC=20;AF=0.526;AN=38;BaseQRankSum=2.020;DP=213;FS=6.462;HRun=0;HaplotypeScore=40.5665;InbreedingCoeff=0.5268;MQ=31.35;MQ0=43;MQRankSum=-4.024;QD=18.49;ReadPosRankSum=0.666;VQSLOD=2.1854;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:20:42.10:0,42,731	1/1:1,3:3:3.01:77,3,0	./.	./.	0/0:19,0:19:39.13:0,39,716	1/1:6,3:7:3.01:79,3,0	0/1:8,2:3:49.15:73,0,49	0/0:8,0:1:3.01:0,3,55	./.	0/0:4,0:4:9.03:0,9,166	0/0:3,0:3:6.02:0,6,110	./.	./.	./.	1/1:2,2:3:3.01:79,3,0	1/1:4,2:3:3.01:79,3,0	1/1:10,7:12:21.07:553,21,0	0/0:16,0:11:18.06:0,18,315	1/1:11,3:7:9.03:236,9,0	1/1:4,2:5:6.02:156,6,0	0/1:6,2:5:2.17:21,0,2	1/1:4,1:3:3.01:79,3,0	0/0:5,0:4:6.02:0,6,110	0/0:20,0:14:36.12:0,36,662	./.	1/1:3,5:6:15.05:395,15,0	./.	./.
chr10	68637625	.	TTGGTTC	T	424.12	PASS	AB=0.933;AC=8;AF=0.167;AN=48;BaseQRankSum=1.374;DP=202;FS=2.559;HRun=0;HaplotypeScore=34.9757;InbreedingCoeff=0.0615;MQ=29.80;MQ0=39;MQRankSum=-3.691;QD=11.46;ReadPosRankSum=-2.082;VQSLOD=1.4668;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:25:44.87:0,45,1087	./.	./.	0/0:11,0:1:1.82:0,2,5	0/0:11,0:9:15.05:0,15,393	0/1:5,0:5:37.99:38,0,86	./.	0/0:10,0:8:14.80:0,15,193	0/0:2,0:2:1.55:0,2,4	0/0:1,0:1:3.01:0,3,34	0/0:5,0:4:8.96:0,9,73	0/0:5,0:4:3:0,3,29	1/1:1,0:1:3.01:55,3,0	0/1:5,1:5:9.45:51,0,9	0/0:5,0:4:0.78:0,1,6	./.	0/0:5,0:3:3.01:0,3,32	0/0:4,0:1:3.01:0,3,43	0/0:4,0:2:5.95:0,6,68	1/1:1,1:2:3.01:45,3,0	0/0:3,0:2:0.20:0,0,31	0/0:4,0:2:3:0,3,29	0/0:8,0:6:5.05:0,5,254	0/0:29,0:20:47.72:0,48,1157	0/0:6,0:2:3:0,3,28	0/0:3,0:2:6.02:0,6,92	0/1:9,0:5:9.83:16,0,10	0/1:12,2:10:52.38:334,0,52
chr10	68637626	.	TGGTTC	T	436.20	PASS	AB=0.920;AC=12;AF=0.250;AN=48;BaseQRankSum=1.507;DP=200;FS=5.858;HRun=0;HaplotypeScore=33.4967;InbreedingCoeff=0.1525;MQ=29.43;MQ0=38;MQRankSum=-4.045;QD=9.69;ReadPosRankSum=-1.182;VQSLOD=0.6574;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:24:44.99:0,45,964	./.	./.	0/0:10,0:1:1.82:0,2,5	0/0:11,0:9:15.05:0,15,356	0/1:5,1:6:57.40:57,0,84	./.	0/0:11,0:9:17.62:0,18,183	1/1:2,0:2:2.37:8,2,0	0/0:0,0:1:2.99:0,3,23	0/0:6,0:5:8.96:0,9,73	0/0:4,0:3:3:0,3,29	1/1:0,1:1:3.01:55,3,0	0/1:6,0:5:5.82:51,0,6	1/1:5,0:4:3.15:11,3,0	./.	0/0:5,0:3:3.01:0,3,32	0/0:5,0:1:3.01:0,3,43	0/0:4,0:2:5.99:0,6,63	1/1:2,0:2:3.01:46,3,0	0/0:3,0:2:0.20:0,0,25	0/0:4,0:2:2.98:0,3,22	0/0:8,0:6:4.60:0,5,217	0/0:28,0:19:46.21:0,46,1050	0/0:5,0:2:3:0,3,28	0/0:2,0:2:6.02:0,6,75	0/1:9,0:5:9.80:29,0,10	0/1:11,3:10:52.19:303,0,52
chr10	68637640	.	TTC	T	1739.39	PASS	AB=0.864;AC=36;AF=0.692;AN=52;BaseQRankSum=5.075;DP=237;FS=1.416;HRun=0;HaplotypeScore=41.5202;InbreedingCoeff=0.4820;MQ=35.74;MQ0=28;MQRankSum=-1.479;QD=13.18;ReadPosRankSum=-2.185;VQSLOD=2.8937;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:24:47.02:0,47,670	0/1:4,1:3:8.02:8,0,30	./.	0/0:5,0:1:2.90:0,3,16	0/0:12,0:11:23.09:0,23,315	1/1:3,3:6:1.20:170,1,0	./.	0/0:10,0:6:17.63:0,18,113	1/1:3,0:3:6:51,6,0	1/1:5,0:5:11.99:121,12,0	1/1:2,4:4:9.03:127,9,0	1/1:3,2:4:12.02:136,12,0	1/1:3,1:4:4.74:58,5,0	1/1:8,1:8:8.89:64,9,0	0/1:8,2:9:0.91:134,0,1	1/1:1,1:2:3:25,3,0	1/1:7,5:11:20.88:176,21,0	1/1:9,0:4:10.55:65,11,0	1/1:3,3:4:11.96:122,12,0	0/1:5,0:4:10.33:42,0,10	1/1:3,1:2:6.02:84,6,0	1/1:5,1:4:5.67:38,6,0	0/0:11,0:10:20.12:0,20,256	0/0:27,0:19:42.26:0,42,724	1/1:4,3:5:11.94:108,12,0	1/1:1,2:3:9.02:112,9,0	1/1:7,3:7:15.01:168,15,0	0/1:11,4:10:75.70:102,0,76
chr10	68637641	.	TC	T	1224.98	PASS	AB=0.967;AC=33;AF=0.635;AN=52;BaseQRankSum=5.336;DP=231;FS=2.247;HRun=2;HaplotypeScore=45.5784;InbreedingCoeff=0.2971;MQ=37.24;MQ0=26;MQRankSum=-0.362;QD=9.35;ReadPosRankSum=-1.974;VQSLOD=0.6700;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:22:38.96:0,39,427	0/1:5,0:3:8.03:8,0,30	./.	0/0:5,0:1:1.82:0,2,5	0/0:10,0:10:23.09:0,23,240	0/1:5,1:6:2.82:66,0,3	./.	0/0:14,0:9:2.58:0,3,82	1/1:3,0:3:6:51,6,0	0/1:5,0:5:6.04:82,0,6	1/1:5,0:4:8.71:49,9,0	1/1:5,0:5:14.82:109,15,0	0/1:5,0:5:17.35:24,0,17	1/1:6,0:5:8.91:64,9,0	0/1:9,1:9:0.96:108,0,1	1/1:3,0:3:5.99:49,6,0	1/1:12,0:11:20.77:150,21,0	1/1:5,4:4:11.99:111,12,0	1/1:6,0:4:11.67:70,12,0	0/1:7,0:6:6.89:64,0,7	1/1:2,2:2:5.84:35,6,0	1/1:6,0:4:5.68:38,6,0	0/0:10,0:10:17.02:0,17,134	0/0:24,2:19:0.34:0,0,445	1/1:6,0:5:11.84:82,12,0	1/1:4,0:4:11.83:86,12,0	1/1:9,1:8:17.50:115,17,0	0/1:14,0:9:23.77:24,0,71
chr10	68637667	.	C	CCTTG	9499.94	PASS	AB=0.533;AC=35;AF=0.673;AN=52;BaseQRankSum=-2.254;DP=316;FS=13.409;HRun=0;HaplotypeScore=53.2124;InbreedingCoeff=0.8343;MQ=42.26;MQ0=26;MQRankSum=-3.100;QD=52.78;ReadPosRankSum=-0.621;VQSLOD=4.6423;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:31:63.47:0,63,1208	1/1:3,5:6:12.04:316,12,0	./.	./.	0/0:10,0:10:24.08:0,24,441	0/1:1,7:8:11.21:528,0,11	1/1:3,7:9:18.06:474,18,0	0/0:15,0:9:6.02:0,6,110	1/1:1,4:4:12.04:317,12,0	0/0:8,0:8:18.06:0,18,331	0/0:14,0:13:30.10:0,30,552	1/1:1,7:8:18.06:475,18,0	1/1:2,4:6:15.05:374,15,0	1/1:0,13:12:36.12:948,36,0	1/1:4,11:14:10.11:693,10,0	1/1:0,3:3:6.02:158,6,0	1/1:1,17:18:39.13:1028,39,0	0/0:17,0:12:30.10:0,30,552	1/1:4,7:7:18.06:474,18,0	1/1:4,11:14:36.12:908,36,0	1/1:3,4:5:9.03:196,9,0	1/1:1,4:3:9.03:237,9,0	0/0:13,0:13:29.95:0,30,551	0/0:21,0:16:33.11:0,33,607	1/1:1,7:7:15.05:395,15,0	1/1:0,9:8:24.08:633,24,0	1/1:2,15:16:36.12:949,36,0	1/1:5,6:7:15.05:395,15,0
chr10	68637833	.	T	TA	19371.95	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=-11.677;DP=599;FS=14.215;HRun=0;HaplotypeScore=52.5271;InbreedingCoeff=0.9941;MQ=86.00;MQ0=0;MQRankSum=-4.677;QD=42.86;ReadPosRankSum=3.558;VQSLOD=3.9463;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:75.25:0,75,1047	1/1:0,4:4:12.04:192,12,0	0/0:25,0:25:61.11:0,61,904	0/0:17,0:17:48.12:0,48,629	0/0:25,0:25:72.24:0,72,1005	1/1:0,26:26:72.25:1150,72,0	1/1:0,19:19:48.16:766,48,0	1/1:0,25:26:75.24:1169,75,0	1/1:0,11:11:33.11:527,33,0	1/1:0,25:25:75.23:1174,75,0	1/1:0,23:23:63.21:983,63,0	1/1:1,26:27:60.20:958,60,0	1/1:1,16:17:39.13:621,39,0	1/1:0,23:23:69.23:1092,69,0	1/1:0,31:31:84.29:1333,84,0	1/1:0,13:13:33.11:528,33,0	1/1:0,18:18:51.17:815,51,0	0/0:23,0:23:69.23:0,69,962	1/1:1,25:26:78.18:1215,78,0	1/1:0,22:22:57.19:900,57,0	1/1:0,42:42:99:1774,111,0	1/1:0,17:17:48.16:757,48,0	0/0:18,0:18:48.16:0,48,671	0/0:14,0:14:42.13:0,42,571	1/1:1,10:11:27.09:431,27,0	1/1:1,27:28:75.24:1167,75,0	1/1:0,27:27:66.23:1053,66,0	1/1:0,16:16:48.16:767,48,0
chr10	68641903	.	TTGTG	T	8041.79	PASS	AB=0.644;AC=35;AF=0.625;AN=56;BaseQRankSum=3.589;DP=678;FS=6.753;HRun=0;HaplotypeScore=122.3949;InbreedingCoeff=0.7723;MQ=56.37;MQ0=12;MQRankSum=-0.001;QD=19.15;ReadPosRankSum=3.606;VQSLOD=3.8944;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:42:58.94:0,59,1038	1/1:7,8:16:27.09:418,27,0	0/0:20,0:8:3.90:0,4,66	0/0:28,0:7:2.88:0,3,15	0/0:29,0:31:59.66:0,60,1135	1/1:7,9:18:4.65:510,5,0	1/1:21,5:28:3.05:312,3,0	0/0:29,0:25:19.24:0,19,221	1/1:12,11:24:32.96:494,33,0	0/0:17,0:19:31.90:0,32,498	0/0:22,0:23:44.82:0,45,752	1/1:18,8:28:38.74:506,39,0	1/1:8,6:16:12.11:385,12,0	1/1:9,8:17:18.05:264,18,0	0/1:13,14:29:26.23:589,0,26	1/1:11,14:28:52.03:738,52,0	1/1:15,11:27:45.13:655,45,0	0/0:19,0:21:41.52:0,42,681	1/1:10,3:14:2.54:156,3,0	1/1:12,5:18:29.05:338,29,0	1/1:42,8:51:27.62:459,28,0	1/1:10,14:25:17.66:690,18,0	0/0:11,0:12:32.85:0,33,714	0/0:30,1:33:24.36:0,24,1359	1/1:10,6:18:18.05:258,18,0	1/1:13,14:27:30.09:449,30,0	1/1:17,13:31:57.42:775,57,0	1/1:3,0:2:3.01:46,3,0
chr10	68641997	.	CT	C	10357.39	PASS	AB=0.952;AC=44;AF=0.786;AN=56;BaseQRankSum=8.379;DP=635;FS=8.571;HRun=10;HaplotypeScore=69.5005;InbreedingCoeff=0.7940;MQ=66.01;MQ0=1;MQRankSum=-0.096;QD=20.43;ReadPosRankSum=1.107;VQSLOD=5.7097;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:96.19:0,96,1031	1/1:2,6:8:14.99:130,15,0	0/1:17,2:14:29:29,0,117	0/1:11,0:8:9.96:10,0,25	0/0:17,1:18:18.80:0,19,417	1/1:5,16:21:21.49:341,21,0	1/1:2,18:20:53.99:469,54,0	1/1:7,19:25:53.94:464,54,0	1/1:3,20:23:59.98:521,60,0	1/1:1,27:28:80.95:694,81,0	1/1:2,19:21:53.96:469,54,0	1/1:1,21:22:59.99:521,60,0	1/1:3,16:18:44.99:391,45,0	1/1:1,16:17:47.99:417,48,0	1/1:2,30:32:50.80:670,51,0	1/1:1,17:18:44.99:391,45,0	1/1:2,29:31:78.44:677,78,0	0/0:23,0:24:68.99:0,69,732	1/1:5,19:24:56.98:495,57,0	1/1:1,26:27:65.98:573,66,0	1/1:2,22:24:50.99:443,51,0	1/1:4,17:21:50.98:443,51,0	0/0:17,0:17:39.09:0,39,423	0/0:26,0:27:69.01:0,69,736	1/1:3,20:23:61.79:526,62,0	1/1:2,32:34:65.80:800,66,0	1/1:2,23:25:65.98:573,66,0	1/1:1,12:12:35.99:313,36,0
chr10	68643496	.	T	TTATC	3902.06	PASS	AB=0.893;AC=38;AF=0.792;AN=48;BaseQRankSum=-2.924;DP=717;FS=9.854;HRun=0;HaplotypeScore=134.4816;InbreedingCoeff=0.5687;MQ=69.53;MQ0=5;MQRankSum=-1.406;QD=7.56;ReadPosRankSum=-0.969;VQSLOD=2.1841;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:18.06:0,18,266	1/1:12,2:14:3.01:68,3,0	./.	./.	0/1:27,0:31:0:0,0,0	1/1:19,0:23:6.02:87,6,0	./.	./.	0/0:22,0:22:24.08:0,24,355	1/1:28,11:38:30.10:666,30,0	1/1:25,8:34:6.01:137,6,0	1/1:15,9:25:21.07:477,21,0	1/1:20,0:20:6.02:100,6,0	1/1:23,4:27:12.04:274,12,0	1/1:14,5:19:3.01:68,3,0	1/1:23,1:28:9.02:131,9,0	1/1:18,6:24:9.03:205,9,0	1/1:9,2:11:6.49:137,6,0	1/1:17,0:17:6.02:99,6,0	1/1:21,5:26:12.04:260,12,0	1/1:19,0:20:8.89:155,9,0	1/1:16,7:23:18.06:410,18,0	0/0:34,0:33:24.04:0,24,309	0/0:19,0:19:12:0,12,150	1/1:23,2:30:6.02:89,6,0	0/1:32,4:36:28.99:219,0,29	1/1:30,7:38:15.05:255,15,0	1/1:29,0:29:6.02:65,6,0
chr10	68646263	.	C	CA	6505.72	PASS	AB=1.000;AC=37;AF=0.661;AN=56;BaseQRankSum=-8.620;DP=515;FS=6.898;HRun=10;HaplotypeScore=58.0912;InbreedingCoeff=0.8611;MQ=65.65;MQ0=12;MQRankSum=-0.195;QD=19.77;ReadPosRankSum=2.550;VQSLOD=5.8007;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:86.79:0,87,699	1/1:0,5:5:12.03:128,12,0	0/0:29,0:14:16.49:0,16,142	0/1:27,0:7:0.37:0,0,52	0/0:16,0:17:49.94:0,50,394	1/1:6,19:23:51.13:541,51,0	1/1:1,11:12:24.06:255,24,0	0/0:3,0:25:38.20:0,38,111	1/1:2,10:13:23.72:216,24,0	0/0:15,0:15:38.94:0,39,317	0/0:12,0:12:32.96:0,33,271	1/1:1,22:23:48.12:510,48,0	1/1:8,15:22:21.72:422,22,0	1/1:2,14:16:32.91:348,33,0	1/1:3,16:19:10.80:440,11,0	1/1:4,15:19:26.90:288,27,0	1/1:2,26:28:63.16:673,63,0	0/0:21,0:23:57.05:0,57,436	1/1:6,11:15:3.84:315,4,0	1/1:1,6:7:18.05:192,18,0	1/1:1,7:8:18.05:192,18,0	1/1:0,1:1:3.01:32,3,0	0/0:17,0:17:44.93:0,45,369	0/0:13,0:14:37.66:0,38,301	1/1:6,12:17:30.08:320,30,0	1/1:3,26:29:77.93:810,78,0	1/1:8,17:26:22.59:619,23,0	1/1:4,9:13:0.83:203,1,0
chr10	68647705	.	A	AACT	31347.62	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=-15.098;DP=783;FS=6.942;HRun=0;HaplotypeScore=98.6533;InbreedingCoeff=0.9998;MQ=80.43;MQ0=1;MQRankSum=-6.322;QD=52.33;ReadPosRankSum=2.936;VQSLOD=7.2619;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,105,1665	1/1:4,14:18:39.13:848,39,0	0/0:30,0:29:75.22:0,75,1136	0/0:20,0:20:44.55:0,45,575	0/0:25,0:25:72.22:0,72,1097	1/1:8,21:29:51.17:1087,51,0	1/1:2,19:22:51.17:1087,51,0	1/1:7,20:30:72.07:1260,72,0	1/1:1,20:21:54.19:1179,54,0	1/1:4,29:35:96.21:1941,96,0	1/1:2,16:19:42.14:915,42,0	1/1:2,32:35:90.31:1958,90,0	1/1:0,26:26:75.26:1584,75,0	1/1:4,31:35:84.29:1826,84,0	1/1:1,39:40:99:2222,102,0	1/1:2,35:37:90.31:1960,90,0	1/1:3,32:35:45.75:1917,46,0	0/0:9,0:9:27.09:0,27,420	1/1:4,17:22:57.20:1179,57,0	1/1:3,30:33:84.29:1729,84,0	1/1:4,39:43:99:2109,100,0	1/1:3,21:24:57.20:1236,57,0	0/0:28,0:28:84.27:0,84,1301	0/0:32,0:32:93.30:0,93,1451	1/1:3,23:26:63.22:1377,63,0	1/1:2,18:21:63.22:1340,63,0	1/1:3,25:29:72.25:1545,72,0	1/1:2,17:19:48.16:1049,48,0
chr10	68648223	.	TGC	T	749.95	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=4.171;DP=350;FS=6.752;HRun=0;HaplotypeScore=54.2295;InbreedingCoeff=0.8002;MQ=53.06;MQ0=9;MQRankSum=0.271;QD=37.50;ReadPosRankSum=0.010;VQSLOD=5.1246;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:90.31:0,90,1826	0/0:3,0:3:9.03:0,9,183	0/0:2,0:2:2.98:0,3,22	0/0:8,0:4:5.23:0,5,60	0/0:19,0:19:47.72:0,48,891	0/0:13,0:13:33.10:0,33,633	0/0:13,0:12:21.07:0,21,419	0/0:26,0:21:57.19:0,57,1109	0/0:9,0:9:27.09:0,27,527	1/1:0,9:9:27.09:440,27,0	1/1:1,10:10:27.09:430,27,0	0/0:7,0:7:15.05:0,15,304	0/0:7,0:7:21.07:0,21,426	0/0:8,0:8:21.06:0,21,390	0/0:13,0:13:30.09:0,30,573	0/0:17,0:17:39.12:0,39,755	0/0:18,0:18:42.13:0,42,808	0/0:11,0:9:23.98:0,24,347	0/0:16,0:13:39.13:0,39,758	0/0:16,0:15:39.13:0,39,787	0/0:20,0:19:48.14:0,48,922	0/0:3,0:3:9.03:0,9,182	0/0:7,0:7:21.07:0,21,426	0/0:15,0:15:39.13:0,39,774	0/0:12,0:12:27.07:0,27,476	0/0:14,0:13:39.13:0,39,752	0/0:14,0:14:36.11:0,36,694	0/0:8,0:6:15.05:0,15,301
chr10	68648263	.	CTTTT	C	870.57	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-2.162;DP=430;FS=2.908;HRun=7;HaplotypeScore=96.8027;InbreedingCoeff=0.7670;MQ=69.70;MQ0=5;MQRankSum=-4.876;QD=29.02;ReadPosRankSum=-3.238;VQSLOD=0.4864;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:75.26:0,75,1946	0/0:6,0:6:16.61:0,17,285	0/0:32,0:9:12.68:0,13,240	0/0:29,0:14:13.20:0,13,257	0/0:21,0:20:57.20:0,57,1475	0/0:15,0:15:45.15:0,45,749	0/0:8,0:8:14.75:0,15,254	1/1:10,20:30:63.10:965,63,0	0/0:14,0:14:39.13:0,39,716	0/0:13,0:13:38.56:0,39,344	0/0:8,0:8:23.73:0,24,240	0/0:11,0:11:18.06:0,18,318	0/0:9,0:9:21.07:0,21,337	0/0:10,0:10:15.05:0,15,242	0/0:11,0:11:12.04:0,12,199	0/0:16,0:17:39.12:0,39,596	0/0:22,0:22:42.12:0,42,646	0/0:1,0:6:14.67:0,15,88	0/0:25,0:26:72.24:0,72,1194	0/0:13,0:13:27.05:0,27,401	0/0:15,0:15:30.10:0,30,450	0/0:2,0:2:6.02:0,6,85	0/0:8,0:8:21.07:0,21,546	0/0:11,0:11:33.11:0,33,868	0/0:14,0:15:30.10:0,30,469	0/0:25,0:25:72.19:0,72,1086	0/0:14,0:14:39.13:0,39,709	0/0:6,0:6:12.04:0,12,201
chr10	68648269	.	T	TA	1813.19	PASS	AB=0.632;AC=24;AF=0.429;AN=56;BaseQRankSum=0.742;DP=414;FS=3.459;HRun=0;HaplotypeScore=70.4796;InbreedingCoeff=0.1476;MQ=70.84;MQ0=7;MQRankSum=0.894;QD=8.09;ReadPosRankSum=3.535;VQSLOD=3.3474;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:81.11:0,81,1015	1/1:5,1:6:6.88:54,7,0	0/0:41,0:10:8.37:0,8,130	0/0:28,0:12:7.47:0,7,154	0/0:19,0:18:57.15:0,57,732	0/1:10,6:16:10.26:175,0,10	0/1:4,5:9:12.24:41,0,12	0/0:24,0:24:56.94:0,57,274	0/1:9,5:15:35.77:131,0,36	0/0:14,0:14:11.12:0,11,52	0/0:8,0:8:14.47:0,14,51	0/1:3,7:10:5.60:64,0,6	0/1:3,6:10:8.16:90,0,8	0/1:2,5:7:2.10:21,0,2	0/1:1,7:8:7.40:46,0,7	0/1:7,11:18:14.50:96,0,15	1/1:6,14:20:29.29:243,29,0	0/0:8,0:7:10.48:0,10,49	0/1:10,14:24:42.91:182,0,43	1/1:2,9:11:17.92:154,18,0	0/1:4,9:14:3.11:93,0,3	1/1:1,1:2:2.35:26,2,0	0/0:8,0:8:23.96:0,24,292	0/0:12,0:12:33.05:0,33,402	0/1:4,8:13:5.33:114,0,5	1/1:11,12:25:3.51:291,4,0	0/1:8,3:11:11.23:106,0,11	1/1:1,2:4:7.15:61,7,0
chr10	68648270	.	T	TA	2661.45	PASS	AB=0.958;AC=40;AF=0.714;AN=56;BaseQRankSum=-1.062;DP=421;FS=1.060;HRun=13;HaplotypeScore=71.0819;InbreedingCoeff=0.6089;MQ=70.29;MQ0=7;MQRankSum=-0.075;QD=10.08;ReadPosRankSum=-0.714;VQSLOD=2.9263;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,1:28:30.29:0,30,335	1/1:5,0:7:12.73:81,13,0	0/0:40,0:10:11.49:0,11,63	0/0:28,0:12:5.88:0,6,41	0/0:16,0:17:45.64:0,46,295	1/1:16,0:16:21.39:240,21,0	1/1:8,0:8:5.34:72,5,0	0/0:25,0:25:46.85:0,47,222	1/1:12,2:15:18.16:201,18,0	1/1:16,0:16:0.56:25,1,0	0/0:9,0:9:5.92:0,6,17	1/1:9,0:9:8.33:99,8,0	1/1:11,0:11:20.84:172,21,0	1/1:6,0:6:3.47:29,3,0	1/1:9,0:9:2.35:50,2,0	1/1:17,0:17:1.06:119,1,0	1/1:20,0:21:34.43:286,34,0	0/0:8,0:7:14.78:0,15,74	1/1:24,1:24:8.66:236,9,0	1/1:10,0:11:20.94:177,21,0	1/1:13,0:13:17.84:147,18,0	1/1:3,0:3:3:28,3,0	0/1:7,0:8:5.05:5,0,68	0/1:10,1:11:10:10,0,85	1/1:14,0:14:12.88:179,13,0	1/1:27,0:27:53.54:431,54,0	1/1:11,1:13:18.62:187,19,0	1/1:4,0:4:9.32:70,9,0
chr10	68648458	.	CT	C	3848.33	PASS	AB=0.758;AC=38;AF=0.679;AN=56;BaseQRankSum=6.366;DP=452;FS=4.632;HRun=13;HaplotypeScore=49.7036;InbreedingCoeff=0.6620;MQ=71.77;MQ0=0;MQRankSum=-2.339;QD=11.95;ReadPosRankSum=3.111;VQSLOD=3.4932;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,2:27:38.17:0,38,524	1/1:1,5:6:14.91:109,15,0	0/0:17,1:15:12.40:0,12,212	0/1:15,1:13:5.48:5,0,117	0/0:19,3:22:23.11:0,23,364	1/1:3,13:16:26.84:197,27,0	1/1:1,16:17:38.78:284,39,0	1/1:10,17:30:48.66:339,49,0	1/1:3,14:18:2.68:174,3,0	0/0:13,1:14:8.13:0,8,237	0/0:16,1:17:17.14:0,17,320	1/1:4,6:10:8.92:66,9,0	1/1:3,17:20:41.74:306,42,0	1/1:0,11:11:26.85:197,27,0	1/1:0,13:13:26.84:197,27,0	1/1:4,8:12:20.84:153,21,0	1/1:5,14:21:40.75:277,41,0	0/0:14,0:14:29.86:0,30,270	1/1:4,13:19:16.59:264,17,0	1/1:2,13:16:26.83:232,27,0	1/1:5,3:9:7.95:50,8,0	1/1:0,4:4:11.93:88,12,0	0/0:17,1:18:26.15:0,26,406	0/1:13,2:15:10.78:11,0,224	1/1:2,10:12:26.83:197,27,0	0/1:9,18:27:24.91:331,0,25	1/1:1,15:16:35.77:263,36,0	0/1:5,9:14:0.33:110,0,0
chr10	68648574	.	GTTCT	G	15055.01	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=14.687;DP=553;FS=5.380;HRun=0;HaplotypeScore=93.8125;InbreedingCoeff=0.9875;MQ=76.48;MQ0=0;MQRankSum=-4.081;QD=45.48;ReadPosRankSum=5.921;VQSLOD=4.9859;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:72.25:0,72,1865	1/1:0,5:5:9.03:166,9,0	0/0:13,0:13:36.09:0,36,781	0/0:17,0:17:41.73:0,42,965	0/0:45,0:45:99:0,132,3314	1/1:0,22:22:60.21:1104,60,0	1/1:1,18:19:51.17:938,51,0	0/0:28,0:28:75.25:0,75,1923	1/1:0,15:15:39.13:718,39,0	0/0:26,0:25:69.23:0,69,1731	0/0:20,0:20:57.19:0,57,1403	1/1:1,19:20:54.18:975,54,0	1/1:1,17:18:45.15:792,45,0	1/1:0,13:13:36.12:662,36,0	1/1:3,20:23:48.16:865,48,0	1/1:0,15:15:42.14:773,42,0	1/1:4,23:27:48.16:865,48,0	0/0:13,0:13:33.11:0,33,870	1/1:2,26:28:78.27:1429,78,0	1/1:0,22:21:63.22:1159,63,0	1/1:3,12:15:33.11:589,33,0	1/1:1,15:16:45.15:828,45,0	0/0:21,0:21:63.22:0,63,1631	0/0:13,0:13:39.13:0,39,1021	1/1:2,15:17:42.14:736,42,0	1/1:2,21:23:13.80:1024,14,0	1/1:2,24:26:57.20:1049,57,0	1/1:0,7:7:21.07:386,21,0
chr10	68648948	.	CTCCT	C	893.02	PASS	AB=0.768;AC=3;AF=0.054;AN=56;BaseQRankSum=3.026;DP=766;FS=32.058;HRun=0;HaplotypeScore=186.3938;InbreedingCoeff=-0.0606;MQ=59.53;MQ0=15;MQRankSum=-5.691;QD=10.03;ReadPosRankSum=-1.010;VQSLOD=1.4860;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:43:95.65:0,96,2159	0/0:12,0:11:18.03:0,18,256	0/0:35,0:20:9.01:0,9,96	0/0:22,0:14:14.85:0,15,340	0/0:31,0:31:60.66:0,61,1703	0/0:23,0:23:38.94:0,39,517	0/0:31,0:32:27.05:0,27,401	0/1:43,0:42:99:119,0,366	0/0:23,0:24:37.97:0,38,473	0/1:16,10:25:99:499,0,355	0/1:7,8:15:35.17:375,0,35	0/0:26,0:26:41.92:0,42,643	0/0:22,0:22:32.84:0,33,432	0/0:32,0:33:58.45:0,58,671	0/0:30,0:31:54.16:0,54,831	0/0:30,0:30:50.87:0,51,680	0/0:12,0:13:29.05:0,29,358	0/0:17,0:16:33.03:0,33,434	0/0:29,0:19:29.02:0,29,410	0/0:27,0:27:56.29:0,56,770	0/0:34,0:34:50.18:0,50,746	0/0:21,0:21:33.09:0,33,524	0/0:28,0:28:19.60:0,20,1448	0/0:40,0:41:78.87:0,79,1964	0/0:39,0:39:58.92:0,59,631	0/0:29,0:29:51.55:0,52,777	0/0:22,0:22:30.10:0,30,431	0/0:10,0:9:15.05:0,15,201
chr10	68648968	.	TTTC	T	3913.06	PASS	AB=0.970;AC=26;AF=0.464;AN=56;BaseQRankSum=5.249;DP=772;FS=4.485;HRun=0;HaplotypeScore=207.1419;InbreedingCoeff=-0.3458;MQ=39.09;MQ0=29;MQRankSum=-0.308;QD=6.64;ReadPosRankSum=2.277;VQSLOD=2.8990;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:41,1:42:67.83:0,68,2394	0/1:12,2:13:18.43:133,0,18	0/0:27,0:1:3.01:0,3,61	0/0:24,0:7:18.92:0,19,359	0/1:33,3:36:99:111,0,1581	1/1:23,0:23:15.78:176,16,0	0/1:36,0:35:49.28:49,0,368	0/1:52,0:33:26.64:27,0,1171	0/1:23,0:23:24.94:293,0,25	0/1:31,1:30:57.12:57,0,699	0/1:14,1:15:17.95:18,0,197	0/1:22,0:22:99:149,0,102	1/1:19,0:19:4.08:144,4,0	0/1:28,0:28:63.07:278,0,63	0/1:27,0:27:99:170,0,122	0/1:27,0:27:99:225,0,189	1/1:12,0:12:11.48:143,11,0	0/0:11,0:10:21.60:0,22,173	0/1:32,0:18:99:100,0,448	0/1:27,2:29:99:303,0,109	0/1:29,0:28:99:244,0,138	0/1:26,0:26:99:118,0,147	0/0:36,0:36:8.59:0,9,1800	0/0:41,0:41:99:0,107,2278	0/1:41,7:48:99:656,0,110	0/1:30,2:32:99:287,0,210	1/1:17,0:17:8.22:149,8,0	0/1:10,0:8:6.48:85,0,6
chr10	68648971	.	CTCCT	C	5106.46	PASS	AB=0.910;AC=28;AF=0.500;AN=56;BaseQRankSum=3.837;DP=784;FS=0.393;HRun=0;HaplotypeScore=231.0985;InbreedingCoeff=0.0792;MQ=38.92;MQ0=24;MQRankSum=-0.411;QD=9.75;ReadPosRankSum=0.998;VQSLOD=4.1881;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:40:95.97:0,96,2130	1/1:10,3:12:15.01:215,15,0	0/0:28,0:3:6.02:0,6,86	0/0:25,0:8:9.03:0,9,148	0/0:38,0:39:18.49:0,18,1242	1/1:20,3:23:15.13:185,15,0	0/1:32,5:36:99:496,0,308	0/1:53,2:36:29.02:29,0,1310	1/1:20,1:21:13.41:188,13,0	0/0:30,0:30:34.91:0,35,439	0/0:17,0:17:25.19:0,25,229	0/1:21,3:24:75.11:259,0,75	1/1:16,3:19:16.25:232,16,0	1/1:25,3:28:1.74:256,2,0	0/1:25,1:26:99:150,0,185	0/1:24,3:27:99:270,0,252	1/1:10,1:11:19.53:206,20,0	1/1:3,7:9:18.06:302,18,0	0/1:31,1:19:99:183,0,149	0/1:26,3:30:99:240,0,153	0/1:28,0:27:99:301,0,181	0/1:19,7:29:99:386,0,211	0/0:35,0:37:44.83:0,45,1647	0/0:41,0:41:87.70:0,88,2010	0/1:41,6:48:99:456,0,124	0/1:27,5:32:99:415,0,260	1/1:15,2:17:21.06:227,21,0	0/1:12,1:11:99:109,0,100
chr10	68649027	.	CTCCT	C	2236.24	PASS	AB=0.905;AC=20;AF=0.357;AN=56;BaseQRankSum=10.700;DP=943;FS=68.828;HRun=0;HaplotypeScore=387.8798;InbreedingCoeff=-0.5534;MQ=38.84;MQ0=22;MQRankSum=-7.705;QD=3.58;ReadPosRankSum=3.689;VQSLOD=-0.7527;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:35,2:37:40.83:41,0,1329	0/1:16,1:24:99:114,0,272	0/0:42,0:16:14.85:0,15,268	0/0:49,0:13:6.98:0,7,146	0/1:46,3:49:99:330,0,882	0/1:10,7:27:72.83:73,0,469	0/0:30,0:35:15.01:0,15,305	0/0:51,0:34:42.11:0,42,1035	0/0:12,3:24:24.04:0,24,354	0/1:38,2:40:99:123,0,439	0/1:26,4:31:99:163,0,222	0/1:14,5:31:99:133,0,516	0/1:14,3:26:59.92:60,0,412	0/1:20,5:33:99:100,0,391	0/1:12,6:28:99:229,0,355	0/1:12,9:27:99:197,0,285	0/1:8,1:22:3.97:4,0,626	0/1:3,1:6:34.75:35,0,222	0/0:20,1:29:57.32:0,57,842	0/1:32,1:43:99:136,0,685	0/0:15,0:34:37.70:0,38,634	0/1:28,1:35:94.06:94,0,371	0/1:37,3:40:99:112,0,1065	0/0:44,1:43:25.09:0,25,1665	0/1:34,1:48:99:201,0,737	0/1:22,4:33:99:131,0,474	0/1:14,2:22:73.34:73,0,296	0/1:8,1:13:45.93:46,0,173
chr10	68649036	.	T	TCCTTC	5260.70	PASS	AB=0.978;AC=21;AF=0.375;AN=56;BaseQRankSum=-6.166;DP=899;FS=7.615;HRun=0;HaplotypeScore=412.4423;InbreedingCoeff=-0.6003;MQ=36.56;MQ0=16;MQRankSum=1.400;QD=8.68;ReadPosRankSum=5.497;VQSLOD=1.9836;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:52.28:0,52,1130	0/1:23,0:22:99:127,0,168	0/0:34,0:9:22.81:0,23,278	0/0:41,0:12:16.83:0,17,196	0/0:48,0:48:88.12:0,88,1281	0/1:28,0:27:99:263,0,191	0/1:33,0:33:73.82:142,0,74	0/0:50,0:29:57.62:0,58,917	0/1:24,0:24:60.64:196,0,61	0/1:26,13:39:99:1013,0,453	0/1:25,7:30:99:604,0,128	0/1:30,0:30:99:203,0,190	0/1:26,0:26:99:247,0,150	0/1:33,0:33:99:227,0,139	0/1:26,0:26:99:257,0,127	0/1:28,0:28:99:146,0,251	0/1:22,0:22:99:290,0,144	0/1:8,0:8:16.94:17,0,185	0/1:34,0:32:99:182,0,470	0/1:45,0:43:99:250,0,324	0/1:29,0:29:99:327,0,128	0/1:32,0:32:99:181,0,249	0/0:40,0:40:40.95:0,41,992	0/0:42,0:41:72.76:0,73,1504	0/1:47,0:47:99:122,0,561	0/1:30,0:30:99:259,0,138	0/1:24,0:24:99:122,0,218	0/1:12,0:12:84.29:84,0,158
chr10	68649044	.	TTCTCC	T	6190.55	PASS	AB=0.927;AC=26;AF=0.464;AN=56;BaseQRankSum=12.702;DP=777;FS=146.078;HRun=0;HaplotypeScore=342.8254;InbreedingCoeff=-0.8443;MQ=36.23;MQ0=10;MQRankSum=-8.259;QD=8.79;ReadPosRankSum=-0.365;VQSLOD=-0.6190;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:30:99:103,0,1616	0/1:17,3:19:99:386,0,111	0/0:31,0:8:21.04:0,21,421	0/0:42,0:13:23.68:0,24,560	0/1:30,12:42:99:837,0,912	0/1:24,2:25:76.88:77,0,422	0/1:25,0:25:30.40:30,0,385	0/1:44,4:31:99:230,0,603	0/1:20,0:20:35.16:35,0,387	0/1:36,2:38:99:143,0,1125	0/1:25,3:27:99:274,0,326	0/1:23,3:26:99:237,0,348	0/1:23,0:23:75.68:76,0,379	0/1:25,0:25:79.80:80,0,370	0/1:20,0:20:99:118,0,487	0/1:25,0:25:99:176,0,395	0/1:18,0:18:3.17:3,0,657	0/1:8,0:8:19.67:20,0,211	0/1:24,1:24:14.64:15,0,813	0/1:30,5:35:99:692,0,569	0/1:23,0:23:38.54:39,0,473	0/1:22,8:30:80.94:757,0,81	0/1:31,2:33:99:459,0,1112	0/1:35,2:37:76.93:77,0,1886	0/1:34,5:39:99:571,0,348	0/1:21,5:26:99:360,0,276	0/1:18,2:20:23.07:23,0,373	0/1:7,4:11:99:375,0,108
chr10	68649047	.	TCC	T	2774.67	PASS	AB=0.841;AC=24;AF=0.429;AN=56;BaseQRankSum=12.126;DP=743;FS=107.663;HRun=4;HaplotypeScore=311.3849;InbreedingCoeff=-0.7529;MQ=36.35;MQ0=8;MQRankSum=-9.965;QD=4.39;ReadPosRankSum=2.867;VQSLOD=-0.1636;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:19,2:25:99:101,0,867	0/1:14,0:18:39.13:39,0,164	0/0:30,0:7:21.05:0,21,315	0/0:38,0:12:12.85:0,13,370	0/1:32,3:42:99:360,0,452	0/1:18,2:25:73.23:73,0,457	0/1:21,3:26:42.25:42,0,366	0/1:27,2:25:63.34:63,0,261	0/1:11,6:20:99:108,0,309	0/1:31,2:37:57.90:58,0,850	0/1:18,6:26:99:282,0,256	0/1:20,2:25:89.32:89,0,325	0/1:10,6:23:99:156,0,371	0/1:12,4:24:99:120,0,400	0/1:13,5:21:99:104,0,398	0/1:12,5:25:69.91:70,0,361	0/0:16,0:18:38.13:0,38,588	0/1:5,1:8:23.85:24,0,117	0/0:20,1:23:34.92:0,35,728	0/1:28,2:34:99:197,0,540	0/1:18,1:21:40.29:40,0,545	0/1:18,6:28:99:237,0,242	0/1:24,4:32:99:299,0,620	0/1:31,1:36:43.32:43,0,1081	0/1:27,0:35:79.48:79,0,360	0/1:18,2:25:99:107,0,427	0/1:12,6:20:99:193,0,240	0/1:8,0:11:47.32:47,0,110
chr10	68649059	.	C	CT	2264.43	PASS	AB=0.911;AC=23;AF=0.411;AN=56;BaseQRankSum=9.647;DP=711;FS=106.046;HRun=3;HaplotypeScore=292.9763;InbreedingCoeff=-0.7145;MQ=35.71;MQ0=16;MQRankSum=-6.856;QD=3.92;ReadPosRankSum=1.068;VQSLOD=-0.0014;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:27:46.48:46,0,643	0/1:19,0:18:99:106,0,174	0/0:32,0:5:15.05:0,15,184	0/0:28,0:11:10.50:0,10,207	0/1:40,3:44:99:306,0,758	0/1:20,3:24:79.52:80,0,331	0/1:24,3:26:44.90:45,0,337	0/1:27,1:14:88.70:89,0,111	0/0:19,2:21:29.80:0,30,304	0/1:32,5:36:99:211,0,642	0/1:24,1:26:17.79:18,0,373	0/1:22,4:26:99:159,0,243	0/1:20,4:24:55.51:56,0,304	0/1:21,5:26:52.41:52,0,234	0/1:20,2:22:99:109,0,282	0/1:19,6:25:99:169,0,333	0/0:17,1:18:0.71:0,1,436	0/1:8,0:8:35.62:36,0,67	0/1:27,1:21:12.85:13,0,471	0/1:30,2:35:99:236,0,463	0/1:19,1:20:8.44:8,0,453	0/1:22,1:24:75.54:76,0,347	0/1:26,0:27:99:140,0,469	0/0:34,0:34:38.42:0,38,843	0/1:27,0:28:99:134,0,281	0/1:18,4:22:99:244,0,131	0/1:19,1:19:13.38:13,0,212	0/1:6,3:9:74.30:74,0,167
chr10	68649060	.	T	TCCC	4096.30	PASS	AB=0.901;AC=24;AF=0.429;AN=56;BaseQRankSum=9.877;DP=704;FS=126.135;HRun=2;HaplotypeScore=304.4586;InbreedingCoeff=-0.7618;MQ=35.73;MQ0=16;MQRankSum=-9.412;QD=6.86;ReadPosRankSum=2.834;VQSLOD=0.4683;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:22,5:27:99:272,0,849	0/1:17,0:16:3.46:3,0,323	0/0:32,0:5:15.02:0,15,209	0/0:28,0:11:22.86:0,23,291	0/1:41,3:44:99:177,0,955	0/1:22,2:24:99:194,0,321	0/1:24,3:26:95.73:96,0,412	0/1:26,0:13:45.09:45,0,255	0/1:15,6:21:99:185,0,316	0/1:35,2:36:99:196,0,867	0/1:23,3:26:99:281,0,380	0/1:24,1:25:99:130,0,346	0/1:19,6:25:99:282,0,355	0/1:20,6:26:99:362,0,299	0/1:18,4:22:99:234,0,290	0/1:20,5:25:99:204,0,279	0/0:18,0:18:38.96:0,39,605	0/1:7,1:8:86.83:95,0,87	0/0:28,0:21:0.15:0,0,510	0/1:34,1:35:99:218,0,609	0/1:19,1:20:32.94:33,0,587	0/1:21,3:24:99:197,0,474	0/1:23,3:26:99:246,0,598	0/1:32,2:34:60.65:61,0,1058	0/1:24,3:27:85.02:85,0,304	0/1:20,1:21:99:102,0,270	0/1:13,7:19:99:372,0,209	0/1:9,0:9:28.75:29,0,248
chr10	68649071	.	TTTC	T	2020.86	PASS	AB=0.912;AC=23;AF=0.411;AN=56;BaseQRankSum=9.577;DP=618;FS=59.958;HRun=0;HaplotypeScore=254.4001;InbreedingCoeff=-0.7116;MQ=34.37;MQ0=13;MQRankSum=-5.620;QD=4.01;ReadPosRankSum=-2.701;VQSLOD=0.7076;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:26:51:51,0,1144	0/1:18,0:17:41.73:42,0,362	0/0:23,0:3:5.94:0,6,94	0/0:19,0:9:20.87:0,21,303	0/1:36,1:37:99:183,0,824	0/1:16,5:21:45.13:45,0,430	0/1:23,3:25:71.14:71,0,380	0/1:24,2:14:36.75:37,0,447	0/0:16,2:18:19.57:0,20,381	0/1:30,2:31:48.03:48,0,1041	0/1:20,1:21:54.62:55,0,553	0/1:19,2:21:60.01:60,0,441	0/1:21,2:23:43.61:44,0,594	0/1:23,2:25:54.32:54,0,555	0/1:19,2:21:99:176,0,463	0/1:15,8:23:99:227,0,457	0/1:15,1:16:13.28:13,0,674	0/1:6,2:8:37.59:200,0,38	0/0:19,1:13:23.11:0,23,515	0/1:25,4:29:99:167,0,630	0/1:17,1:18:91.86:92,0,334	0/1:18,2:20:36.49:36,0,430	0/1:20,3:23:99:138,0,466	0/0:34,0:34:0.59:0,1,919	0/1:24,2:26:99:187,0,317	0/1:14,4:18:99:201,0,236	0/1:17,1:17:44.10:44,0,481	0/1:8,0:8:2.41:2,0,133
chr10	68651957	.	TCCTTACA	T	1559.17	PASS	AB=0.976;AC=25;AF=0.500;AN=50;BaseQRankSum=3.825;DP=224;FS=24.424;HRun=0;HaplotypeScore=205.6942;InbreedingCoeff=-0.2989;MQ=41.20;MQ0=0;MQRankSum=-3.158;QD=8.76;ReadPosRankSum=-3.499;VQSLOD=0.8009;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:22.74:0,23,600	0/1:11,0:10:6.47:146,0,6	./.	0/0:5,0:3:2.18:0,2,65	0/0:17,0:17:15.01:0,15,538	1/1:7,0:7:18.12:95,18,0	0/1:3,0:3:13.99:26,0,14	./.	1/1:8,0:7:2.45:66,2,0	0/1:8,1:7:6.93:62,0,7	0/1:9,2:11:35.98:164,0,36	0/1:4,0:4:25.27:36,0,25	0/1:7,0:7:13.13:31,0,13	1/1:5,0:5:4.08:70,4,0	0/1:6,0:6:32.88:33,0,55	0/1:6,0:6:23.63:84,0,24	0/1:6,0:6:30.94:31,0,85	0/0:2,0:2:3.01:0,3,31	0/1:4,0:4:18.97:19,0,34	0/1:20,0:20:95.61:96,0,192	1/1:6,0:6:5.56:30,6,0	0/1:16,1:18:99:226,0,138	0/1:12,0:12:35.32:35,0,281	0/0:7,0:7:14.87:0,15,247	0/1:11,0:11:85.71:99,0,86	0/1:17,0:17:45.30:277,0,45	1/1:6,0:6:13.56:86,14,0	./.
chr10	68651960	.	TTA	T	252.97	PASS	AB=0.976;AC=16;AF=0.320;AN=50;BaseQRankSum=3.707;DP=223;FS=7.413;HRun=0;HaplotypeScore=188.8303;InbreedingCoeff=-0.2748;MQ=41.25;MQ0=0;MQRankSum=1.080;QD=1.71;ReadPosRankSum=2.609;VQSLOD=1.3846;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:27.98:0,28,328	0/1:11,0:10:3.17:21,0,3	./.	0/1:5,0:3:22.58:23,0,45	0/0:17,0:17:16.26:0,16,256	0/1:7,0:7:7.05:7,0,24	0/1:3,0:3:9.78:10,0,11	./.	0/0:8,0:7:9.86:0,10,62	0/1:8,1:7:28.74:29,0,71	0/1:11,0:11:38.40:38,0,67	0/0:4,0:4:11.29:0,11,54	0/0:7,0:7:12.24:0,12,54	0/0:5,0:5:2.26:0,2,34	0/1:6,0:6:6.23:6,0,36	0/1:6,0:6:1.71:2,0,23	0/1:5,0:6:6.85:7,0,23	0/0:1,0:2:4.56:0,5,17	0/0:4,0:4:10.84:0,11,69	0/1:18,1:19:4:4,0,187	1/1:4,1:6:3.56:13,4,0	0/1:18,0:18:51.33:70,0,51	0/1:12,0:12:47.35:47,0,214	0/0:6,0:7:18.50:0,18,156	0/1:10,0:11:32.31:45,0,32	0/1:16,2:17:45.96:68,0,46	0/0:6,0:6:1.97:0,2,18	./.
chr10	68651961	.	TACA	T	1937.39	PASS	AB=0.826;AC=38;AF=0.760;AN=50;BaseQRankSum=5.145;DP=217;FS=36.360;HRun=0;HaplotypeScore=185.6916;InbreedingCoeff=0.2300;MQ=41.56;MQ0=0;MQRankSum=-3.658;QD=10.14;ReadPosRankSum=-2.138;VQSLOD=1.2716;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:11,1:12:4.71:0,5,202	1/1:6,5:10:16.45:182,16,0	./.	0/0:5,0:3:2.37:0,2,65	0/1:14,2:16:19.30:19,0,186	1/1:4,3:7:18.16:111,18,0	1/1:2,1:3:7.89:53,8,0	./.	1/1:5,3:7:17.84:110,18,0	0/1:7,2:7:3.31:41,0,3	1/1:9,2:11:14.88:115,15,0	1/1:0,3:4:5.55:43,6,0	1/1:5,2:7:15.58:59,16,0	1/1:1,4:5:13.88:109,14,0	1/1:5,1:6:15.04:83,15,0	1/1:1,5:6:17.58:135,18,0	1/1:4,2:6:6.78:73,7,0	1/1:2,0:2:1.37:4,1,0	0/1:3,1:4:6.76:27,0,7	0/1:12,4:16:19.14:105,0,19	1/1:5,1:6:5.56:30,6,0	1/1:12,6:18:28.95:267,29,0	0/1:10,0:11:19.84:20,0,141	0/0:5,0:6:10.57:0,11,96	0/1:7,4:11:1.25:95,0,1	1/1:11,7:17:31.04:291,31,0	1/1:2,4:6:13.59:107,14,0	./.
chr10	68651963	.	CA	C	2354.87	PASS	AB=0.873;AC=34;AF=0.680;AN=50;BaseQRankSum=3.253;DP=220;FS=26.768;HRun=1;HaplotypeScore=176.8538;InbreedingCoeff=-0.0258;MQ=41.68;MQ0=0;MQRankSum=-1.931;QD=12.66;ReadPosRankSum=1.352;VQSLOD=0.9474;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:17.81:0,18,239	1/1:8,2:10:18.52:160,19,0	./.	0/1:5,0:3:9.85:10,0,42	0/1:15,1:16:28.82:29,0,149	1/1:3,4:7:5.14:158,5,0	1/1:2,1:3:7.51:64,8,0	./.	0/1:4,4:7:14.07:117,0,14	0/1:6,1:7:1.66:70,0,2	1/1:6,3:11:3.67:160,4,0	0/1:4,0:4:27.35:30,0,27	1/1:2,5:7:7.34:179,7,0	0/1:4,1:5:10.32:40,0,10	1/1:1,5:6:17.68:192,18,0	0/1:6,1:6:18.97:54,0,19	1/1:5,1:6:14.69:112,15,0	0/1:2,0:2:5.46:7,0,5	0/1:2,2:4:18.46:72,0,18	1/1:9,5:16:1.86:193,2,0	1/1:5,1:6:5.87:35,6,0	1/1:13,5:18:26.02:318,26,0	0/0:11,0:11:3.39:0,3,110	0/0:7,0:7:4.27:0,4,96	0/1:9,2:11:23.17:86,0,23	1/1:11,5:17:30.68:333,31,0	1/1:4,2:6:4.52:86,5,0	./.
chr10	68651980	.	TTTC	T	192.91	PASS	AB=0.967;AC=10;AF=0.185;AN=54;BaseQRankSum=2.716;DP=326;FS=2.204;HRun=0;HaplotypeScore=264.6313;InbreedingCoeff=-0.1091;MQ=42.50;MQ0=1;MQRankSum=-1.274;QD=1.66;ReadPosRankSum=-0.486;VQSLOD=2.1101;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:33.86:0,34,848	0/0:13,0:12:32.19:0,32,405	0/0:3,0:1:3:0,3,26	0/0:10,0:6:3.57:0,4,66	0/0:17,0:17:36.99:0,37,575	0/0:10,0:10:5.78:0,6,352	0/0:7,0:7:20.48:0,20,218	0/0:2,0:2:3.48:0,3,58	0/0:18,0:17:0.80:0,1,614	0/0:18,1:12:21.31:0,21,403	0/0:17,0:17:46.86:0,47,589	0/0:8,0:8:0.86:0,1,251	0/1:12,0:12:10.21:10,0,642	0/0:9,0:9:24.02:0,24,338	0/1:11,0:11:3.15:3,0,464	0/1:9,0:8:10.82:11,0,145	0/1:9,1:10:53.35:53,0,154	1/1:2,0:2:5.81:50,6,0	0/0:5,0:3:9.03:0,9,182	0/1:21,0:20:12.40:12,0,497	0/0:7,1:8:10.31:0,10,99	0/1:27,0:27:99:111,0,516	0/0:15,0:15:3.62:0,4,391	0/1:7,1:8:26.55:27,0,330	0/1:15,1:16:47.68:48,0,491	0/0:24,0:23:61.07:0,61,875	0/0:10,0:10:19.96:0,20,329	./.
chr10	68651986	.	CT	C	858.92	PASS	AB=0.832;AC=16;AF=0.308;AN=52;BaseQRankSum=3.597;DP=335;FS=6.782;HRun=2;HaplotypeScore=253.7705;InbreedingCoeff=-0.4634;MQ=42.11;MQ0=2;MQRankSum=-1.044;QD=4.19;ReadPosRankSum=-1.851;VQSLOD=-0.7162;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:44.84:0,45,569	0/1:10,2:12:44.16:44,0,332	./.	0/0:9,0:6:10.72:0,11,83	0/1:17,0:17:20.87:21,0,338	0/1:10,1:11:12.82:13,0,243	0/1:5,3:8:99:131,0,112	0/0:2,0:2:6.01:0,6,69	0/1:12,6:17:99:103,0,432	0/0:19,0:11:28.94:0,29,329	0/0:15,1:16:6.09:0,6,345	0/1:6,3:9:51.17:51,0,232	0/0:12,0:12:34.36:0,34,481	0/0:9,0:9:26.76:0,27,364	0/1:12,1:12:9.61:10,0,333	0/0:11,0:10:4.58:0,5,231	0/1:6,5:11:99:117,0,131	0/1:1,1:3:12.96:64,0,13	0/0:7,0:3:9.03:0,9,131	0/1:15,4:19:99:156,0,311	0/1:4,4:8:27.68:137,0,28	0/1:22,4:26:62.69:63,0,344	0/1:16,1:17:29.53:30,0,249	0/1:7,1:8:31.39:31,0,203	0/1:13,1:14:27.15:27,0,346	0/0:24,0:23:20.07:0,20,634	0/1:10,0:10:11.28:11,0,255	./.
chr10	68651989	.	CCTTT	C	2630.79	PASS	AB=0.889;AC=22;AF=0.423;AN=52;BaseQRankSum=4.083;DP=348;FS=19.157;HRun=0;HaplotypeScore=277.0380;InbreedingCoeff=-0.6395;MQ=39.44;MQ0=2;MQRankSum=-2.510;QD=8.60;ReadPosRankSum=-3.815;VQSLOD=1.0132;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:15,1:16:70.44:70,0,850	0/1:10,1:11:28.88:29,0,182	./.	0/0:9,0:5:2.95:0,3,42	0/1:15,3:18:99:233,0,377	0/1:8,3:11:99:127,0,192	0/1:10,0:10:20.12:20,0,75	0/0:2,0:2:1.89:0,2,28	0/1:17,1:17:75:75,0,343	0/1:13,5:11:99:144,0,209	0/1:12,7:19:99:356,0,111	0/1:9,0:9:6.18:6,0,170	0/0:12,0:12:12.19:0,12,404	0/1:8,1:9:27.12:27,0,228	0/1:15,0:14:21.06:21,0,290	0/1:8,3:10:99:162,0,148	0/1:14,0:14:74.92:114,0,75	1/1:3,0:3:5.35:50,5,0	0/0:7,0:3:9.03:0,9,115	0/1:19,1:19:99:122,0,203	0/1:10,0:10:23.52:28,0,24	0/1:19,7:26:99:501,0,182	0/1:12,5:17:99:190,0,339	0/0:8,0:8:15.45:0,15,382	0/1:15,0:15:22.55:23,0,276	0/1:18,7:24:99:370,0,390	0/1:9,2:11:99:111,0,186	./.
chr10	68651999	.	TTGC	T	1508.27	PASS	AB=0.862;AC=17;AF=0.327;AN=52;BaseQRankSum=2.431;DP=378;FS=1.636;HRun=0;HaplotypeScore=289.9772;InbreedingCoeff=-0.3532;MQ=38.27;MQ0=3;MQRankSum=-3.365;QD=6.98;ReadPosRankSum=-2.612;VQSLOD=2.1394;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:16,1:16:42.55:43,0,454	0/0:11,0:11:4.61:0,5,230	./.	0/0:13,0:6:1.02:0,1,17	0/1:15,0:15:40.65:41,0,265	0/1:11,1:12:28.16:28,0,272	0/1:6,5:11:59.85:223,0,60	0/1:2,0:2:14.23:14,0,32	0/1:13,5:16:99:156,0,410	0/0:18,0:12:11.31:0,11,291	0/0:21,0:21:16.98:0,17,263	0/1:7,3:10:76.76:77,0,201	0/0:15,0:14:38.67:0,39,541	0/0:13,0:12:17.99:0,18,211	0/1:18,1:17:21.20:21,0,434	0/0:11,0:10:5.08:0,5,210	0/1:9,8:16:99:435,0,116	1/1:1,2:3:5.06:101,5,0	0/0:6,0:3:9.03:0,9,133	0/1:17,2:18:98.87:99,0,368	0/1:3,8:11:4.91:287,0,5	0/1:23,4:27:82.61:83,0,272	0/0:16,0:15:20.18:0,20,327	0/1:8,1:8:13.19:13,0,222	0/1:13,1:14:5.81:6,0,267	0/0:28,0:25:12.81:0,13,542	0/1:12,0:12:30.96:31,0,244	./.
chr10	68652010	.	TTCCTTCC	T	4344.01	PASS	AB=0.962;AC=28;AF=0.538;AN=52;BaseQRankSum=1.954;DP=412;FS=17.734;HRun=0;HaplotypeScore=338.5141;InbreedingCoeff=-0.7543;MQ=35.15;MQ0=8;MQRankSum=0.170;QD=11.34;ReadPosRankSum=-1.791;VQSLOD=1.8707;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:17,0:16:99:109,0,690	0/1:10,1:11:99:106,0,135	./.	0/0:16,0:5:2.80:0,3,13	0/1:14,2:16:99:175,0,143	0/1:12,0:12:99:178,0,188	0/1:10,0:10:4.79:144,0,5	1/1:5,0:3:3.01:47,3,0	0/1:21,0:19:99:165,0,413	0/1:16,2:12:99:239,0,112	0/1:22,2:24:10.49:512,0,10	0/1:12,0:12:95.19:95,0,211	0/1:15,0:14:12.59:13,0,556	0/1:16,0:14:99:150,0,201	0/1:20,0:18:72.03:72,0,380	0/1:14,1:15:99:168,0,162	0/1:15,2:16:99:340,0,107	1/1:4,0:4:1.66:120,2,0	0/1:7,0:4:16.63:17,0,104	0/1:18,0:17:31.40:192,0,31	1/1:11,0:11:11.89:115,12,0	0/1:28,1:30:99:572,0,236	0/1:18,1:18:99:141,0,415	0/1:10,0:8:14.61:15,0,283	0/1:16,0:16:86.49:86,0,229	0/1:24,2:24:99:363,0,389	0/1:10,2:12:99:210,0,196	./.
chr10	68652014	.	TTCC	T	5809.57	PASS	AB=0.892;AC=31;AF=0.574;AN=54;BaseQRankSum=3.165;DP=413;FS=27.438;HRun=0;HaplotypeScore=291.3639;InbreedingCoeff=-0.6096;MQ=32.81;MQ0=9;MQRankSum=-1.213;QD=14.60;ReadPosRankSum=-4.953;VQSLOD=2.4515;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:17,0:16:99:171,0,239	1/1:6,5:11:1.58:312,2,0	1/1:13,0:1:2.60:10,3,0	0/0:15,0:3:2.80:0,3,13	0/1:17,0:17:16.11:280,0,16	0/1:10,2:12:22:196,0,22	1/1:8,1:9:18.06:245,18,0	1/1:5,0:3:6.02:86,6,0	0/1:19,2:19:32.58:309,0,33	0/1:18,0:12:39.05:39,0,133	0/1:23,1:24:25.61:277,0,26	0/1:9,3:12:55.25:281,0,55	0/1:12,3:14:99:120,0,121	0/1:12,4:14:28.42:353,0,28	0/1:19,1:18:72.19:175,0,72	0/1:12,3:15:36.99:277,0,37	0/1:17,1:17:10.15:377,0,10	0/1:4,1:5:5.75:81,0,6	0/1:7,1:4:13.94:72,0,14	0/1:13,5:17:39.16:337,0,39	1/1:10,1:11:25.65:274,26,0	0/1:25,5:30:21.48:515,0,21	0/1:19,0:18:99:144,0,154	0/1:10,0:8:0.19:0,0,98	0/1:12,3:15:31.17:303,0,31	0/1:23,3:23:35.67:343,0,36	0/1:8,4:12:44.57:231,0,45	./.
chr10	68652017	.	C	CT	9138.40	PASS	AB=0.683;AC=45;AF=0.833;AN=54;BaseQRankSum=-3.838;DP=418;FS=0.000;HRun=1;HaplotypeScore=279.6779;InbreedingCoeff=0.1716;MQ=33.09;MQ0=9;MQRankSum=0.103;QD=23.37;ReadPosRankSum=-0.134;VQSLOD=3.8227;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,17:17:48.16:696,48,0	1/1:8,3:11:8.60:177,9,0	0/0:13,0:1:2.50:0,2,9	0/0:13,0:2:2.64:0,3,13	1/1:9,9:18:25.21:432,25,0	1/1:3,9:12:4.61:342,5,0	1/1:3,5:8:15.33:188,15,0	1/1:4,3:5:5.52:61,6,0	1/1:3,17:18:40.42:614,40,0	0/1:14,7:15:45.90:202,0,46	0/1:11,12:24:0.29:474,0,0	1/1:3,9:12:21.69:336,22,0	1/1:5,10:14:31.74:435,32,0	1/1:5,10:13:23.75:330,24,0	1/1:3,18:19:48.01:627,48,0	1/1:8,7:15:2.62:304,3,0	1/1:4,12:16:28.37:503,28,0	0/1:3,2:6:9.53:96,0,10	1/1:6,3:5:11.69:146,12,0	1/1:9,7:16:9.38:286,9,0	1/1:4,8:12:22.82:339,23,0	1/1:16,16:32:41.97:702,42,0	0/1:6,12:17:8.18:399,0,8	1/1:2,8:8:10.24:250,10,0	1/1:7,8:15:30.41:342,30,0	1/1:12,15:24:48.74:651,49,0	0/1:8,4:12:0.66:206,0,1	./.
chr10	68652021	.	TTTC	T	1883.89	PASS	AB=0.968;AC=25;AF=0.463;AN=54;BaseQRankSum=3.640;DP=424;FS=20.934;HRun=0;HaplotypeScore=309.6261;InbreedingCoeff=-0.7389;MQ=35.72;MQ0=8;MQRankSum=-3.403;QD=4.96;ReadPosRankSum=0.211;VQSLOD=1.2572;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:18,0:17:21.49:21,0,646	0/1:11,0:11:80.35:98,0,80	0/0:14,0:1:3:0,3,29	0/0:17,0:3:2.87:0,3,35	0/1:16,0:16:94.32:94,0,210	0/1:12,0:12:29.44:29,0,179	0/1:8,0:8:8.29:54,0,8	1/1:7,0:5:3.15:58,3,0	0/1:19,1:18:66.63:67,0,237	0/1:15,5:16:99:258,0,128	0/1:20,5:25:99:361,0,180	0/1:12,0:12:79.49:79,0,149	0/1:16,0:15:8.70:9,0,385	0/1:14,1:13:99:126,0,113	0/1:24,0:22:11.28:11,0,349	0/1:13,0:13:82.58:83,0,107	0/1:17,0:16:21.90:22,0,211	0/1:8,0:8:25.34:25,0,162	0/1:7,1:5:38.39:38,0,90	0/1:14,1:15:80.52:98,0,81	0/1:11,0:11:29.49:34,0,29	0/1:30,1:31:99:285,0,152	0/1:20,1:20:48.31:48,0,493	0/0:13,0:11:9.08:0,9,445	0/1:13,0:13:55.25:55,0,157	0/1:27,0:24:1.15:1,0,284	0/1:12,0:12:74.73:75,0,108	./.
chr10	68652044	.	TTTCTCCAACCTTCCG	T	7005.39	PASS	AB=0.982;AC=28;AF=0.519;AN=54;BaseQRankSum=3.258;DP=381;FS=59.351;HRun=0;HaplotypeScore=317.5159;InbreedingCoeff=-0.5242;MQ=43.27;MQ0=3;MQRankSum=-2.967;QD=19.85;ReadPosRankSum=3.835;VQSLOD=1.8212;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:18,0:17:50.56:51,0,453	0/1:8,0:8:7.31:295,0,7	0/0:9,0:3:1.22:0,1,46	0/1:12,0:4:7.22:7,0,52	0/1:16,0:16:90.33:90,0,514	0/1:8,0:8:21.15:188,0,21	1/1:4,0:4:6.02:103,6,0	1/1:8,0:5:7.65:105,8,0	0/1:11,0:10:74.10:74,0,80	0/1:21,0:16:43.53:226,0,44	0/1:23,5:27:62.10:726,0,62	0/1:15,0:14:17.51:275,0,18	0/1:16,0:15:99:168,0,163	0/1:14,2:14:34.71:640,0,35	0/1:22,1:21:86.82:462,0,87	0/1:15,0:14:16.10:565,0,16	0/1:13,0:11:35.54:665,0,36	0/1:10,0:10:11.43:11,0,466	0/0:4,0:2:5.89:0,6,38	1/1:11,0:11:2.17:183,2,0	0/1:8,0:8:0.02:138,0,0	1/1:25,0:24:0.52:820,1,0	0/1:21,0:20:99:143,0,845	0/0:15,0:13:11.19:0,11,530	0/1:15,1:16:41.54:379,0,42	0/1:22,0:20:7.17:557,0,7	0/1:8,0:8:3.91:134,0,4	./.
chr10	68652047	.	C	CTCCCCCT	9530.34	PASS	AB=0.939;AC=35;AF=0.648;AN=54;BaseQRankSum=-2.641;DP=356;FS=74.676;HRun=0;HaplotypeScore=235.3259;InbreedingCoeff=-0.1336;MQ=44.19;MQ0=2;MQRankSum=-2.726;QD=28.20;ReadPosRankSum=3.285;VQSLOD=1.9020;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:16,0:15:3.29:3,0,190	0/1:7,1:8:62.45:331,0,62	0/0:9,0:3:2.34:0,2,37	0/1:11,0:4:0.04:0,0,21	0/1:16,0:16:19.47:19,0,274	1/1:8,0:8:18.05:387,18,0	1/1:3,1:4:6.02:170,6,0	0/1:8,0:5:21.99:76,0,22	1/1:9,0:8:2.95:145,3,0	0/1:18,0:16:99:254,0,212	0/1:24,0:25:99:702,0,154	1/1:7,5:12:13.08:555,13,0	0/1:10,2:11:22.69:476,0,23	1/1:11,2:12:33.08:977,33,0	1/1:11,9:20:33.10:937,33,0	1/1:9,6:14:29.69:980,30,0	0/1:12,0:10:36.74:269,0,37	0/0:9,0:9:26.74:0,27,229	1/1:3,0:1:1.25:3,1,0	0/1:9,2:11:99:284,0,134	1/1:8,0:8:11.95:142,12,0	0/1:16,8:24:99:1388,0,117	0/1:20,0:19:1.88:2,0,424	0/1:14,0:12:0.72:1,0,203	0/1:13,0:13:99:330,0,183	0/1:19,3:21:99:746,0,164	1/1:6,1:8:11.71:353,12,0	./.
chr10	68652048	.	TCCAA	T	1850.54	PASS	AB=0.946;AC=25;AF=0.481;AN=52;BaseQRankSum=6.093;DP=349;FS=35.911;HRun=0;HaplotypeScore=238.0015;InbreedingCoeff=-0.1752;MQ=44.48;MQ0=2;MQRankSum=-1.055;QD=6.32;ReadPosRankSum=-3.271;VQSLOD=0.9168;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:15:26.79:0,27,103	0/1:7,0:7:0.50:63,0,1	0/0:8,0:3:5.64:0,6,64	0/1:11,0:4:2.06:2,0,34	0/1:16,0:17:81.43:81,0,87	0/1:7,0:8:3.87:20,0,4	0/0:4,0:4:0.67:0,1,8	1/1:7,0:4:3.89:32,4,0	0/0:7,0:6:3.01:0,3,38	1/1:15,3:15:14.68:282,15,0	1/1:22,4:25:16.73:293,17,0	0/0:9,1:9:7.90:0,8,54	0/1:11,1:11:25.29:37,0,25	0/1:15,0:13:23.71:24,0,38	0/1:21,0:19:38.25:38,0,59	0/1:13,1:13:8.21:8,0,76	1/1:11,1:10:23.54:154,24,0	0/1:8,1:9:33.62:81,0,34	./.	0/1:10,0:10:3.84:89,0,4	1/1:8,0:8:3.72:30,4,0	0/1:24,2:25:67.94:180,0,68	0/1:20,0:20:65.55:176,0,66	0/1:15,0:13:22.45:22,0,47	0/1:11,1:13:17.12:143,0,17	0/1:19,2:21:28.75:246,0,29	0/0:8,0:8:8.48:0,8,41	./.
chr10	68652050	.	CA	C	4332.83	PASS	AB=0.842;AC=44;AF=0.815;AN=54;BaseQRankSum=-2.949;DP=301;FS=1.212;HRun=2;HaplotypeScore=172.2212;InbreedingCoeff=-0.1563;MQ=44.24;MQ0=1;MQRankSum=-0.909;QD=14.39;ReadPosRankSum=4.955;VQSLOD=4.7798;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,16:15:39.13:505,39,0	0/1:5,1:6:17.85:18,0,32	0/1:10,0:3:6.67:7,0,11	0/1:8,0:2:20.24:20,0,34	0/1:8,11:19:9.79:390,0,10	1/1:2,3:5:14.72:169,15,0	1/1:3,2:5:5.98:55,6,0	1/1:1,2:2:5.23:46,5,0	1/1:2,1:3:2.68:11,3,0	0/1:12,1:12:37.34:77,0,37	1/1:18,4:21:11.28:284,11,0	1/1:8,0:7:13.69:62,14,0	1/1:4,5:8:22.20:191,22,0	1/1:10,2:11:27.13:176,27,0	1/1:14,5:18:28.71:225,29,0	1/1:10,0:9:20.34:79,20,0	1/1:4,4:10:2.88:248,3,0	1/1:2,7:9:19.93:274,20,0	0/1:1,0:1:0:0,0,0	0/1:6,0:7:21.14:65,0,21	1/1:2,3:7:12.04:151,12,0	1/1:19,3:23:13.70:313,14,0	0/1:9,12:20:38.82:367,0,39	1/1:2,11:12:5.78:294,6,0	0/1:8,3:12:33.99:129,0,34	0/1:14,4:18:44.98:128,0,45	1/1:3,2:5:8.54:49,9,0	./.
chr10	68652055	.	TTCCG	T	1332.55	PASS	AB=0.983;AC=23;AF=0.411;AN=56;BaseQRankSum=6.961;DP=383;FS=30.550;HRun=0;HaplotypeScore=203.7000;InbreedingCoeff=-0.3460;MQ=42.62;MQ0=4;MQRankSum=-3.461;QD=4.34;ReadPosRankSum=-0.029;VQSLOD=1.3985;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:19:15.86:0,16,362	0/1:8,0:8:19.77:20,0,42	0/0:12,0:4:4.79:0,5,39	0/1:8,0:2:6.01:6,0,20	0/1:20,0:20:24.53:25,0,226	0/1:11,0:11:47.75:48,0,104	0/1:10,0:10:5.33:5,0,51	0/1:9,0:5:27.84:28,0,44	0/0:4,0:4:5.99:0,6,54	0/1:16,2:14:37.90:161,0,38	1/1:21,1:21:32.15:248,32,0	0/0:10,1:10:20.25:0,20,193	0/1:11,1:11:84.66:85,0,91	0/1:15,0:14:19.22:19,0,126	0/1:27,0:25:73.24:73,0,151	0/0:13,1:12:5.01:0,5,150	1/1:13,1:13:0.88:213,1,0	0/1:10,0:10:32:32,0,165	0/0:5,0:4:6.47:0,6,54	0/1:11,0:11:28.96:29,0,78	1/1:9,0:8:10.67:61,11,0	0/1:27,2:28:99:135,0,262	0/1:21,0:20:60.08:60,0,209	0/1:17,0:15:16.26:16,0,191	0/1:14,0:13:37.81:79,0,38	0/1:21,1:21:99:150,0,190	0/0:9,0:7:16.95:0,17,141	0/0:1,0:1:3:0,3,28
chr10	68652105	.	C	CCCTT	935.44	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=0.594;DP=732;FS=2.807;HRun=0;HaplotypeScore=171.0468;InbreedingCoeff=0.9154;MQ=44.21;MQ0=14;MQRankSum=-0.520;QD=37.42;ReadPosRankSum=-0.665;VQSLOD=3.6863;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:24:16.93:0,17,760	0/0:15,0:14:10.78:0,11,429	0/0:37,0:11:20.95:0,21,273	0/0:42,0:19:45.11:0,45,677	0/0:24,0:24:36.86:0,37,583	0/0:14,0:14:39.09:0,39,615	0/0:24,0:24:40.17:0,40,597	0/0:34,0:31:33.57:0,34,490	0/0:23,0:22:63.21:0,63,1030	0/0:37,0:29:47.94:0,48,722	0/0:22,0:21:27.84:0,28,507	0/0:29,0:28:32.67:0,33,996	0/0:24,0:23:45.61:0,46,708	0/0:22,0:21:47.48:0,47,712	0/0:37,0:37:87.25:0,87,1363	0/0:27,0:24:54.18:0,54,892	0/0:33,0:31:55.67:0,56,1159	1/1:4,19:25:42.14:1030,42,0	0/0:20,0:14:32.37:0,32,522	0/0:28,0:28:43.18:0,43,840	0/0:24,0:23:51.17:0,51,832	0/0:37,0:36:67.53:0,68,1017	0/0:20,0:20:20.64:0,21,283	0/0:27,0:27:51.17:0,51,832	0/0:18,0:17:30.83:0,31,508	0/0:40,0:36:80.60:0,81,1365	0/0:19,0:17:48.16:0,48,777	0/0:4,0:4:12.04:0,12,198
chr10	68653007	.	GA	G	5391.01	PASS	AB=0.693;AC=43;AF=0.768;AN=56;BaseQRankSum=4.904;DP=580;FS=1.906;HRun=12;HaplotypeScore=72.3815;InbreedingCoeff=0.6837;MQ=63.79;MQ0=4;MQRankSum=-1.056;QD=12.06;ReadPosRankSum=0.755;VQSLOD=4.8358;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,3:33:36.68:0,37,695	1/1:4,10:14:13.71:114,14,0	0/0:37,0:20:11.79:0,12,114	0/1:20,2:14:7.38:7,0,87	0/0:24,0:26:44.41:0,44,582	1/1:1,21:23:52.84:401,53,0	1/1:3,18:21:41.84:325,42,0	1/1:5,0:20:12.85:66,13,0	1/1:6,11:17:26.88:208,27,0	1/1:3,0:27:47.17:141,47,0	1/1:2,0:20:31.92:92,32,0	1/1:3,11:14:20.69:154,21,0	1/1:3,18:21:46.85:354,47,0	1/1:4,13:17:26.89:209,27,0	0/1:4,17:22:4.98:322,0,5	1/1:4,14:18:26.88:209,27,0	1/1:3,23:26:17.37:318,17,0	1/1:3,10:13:2.44:202,2,0	1/1:2,9:11:26.39:184,26,0	1/1:3,14:18:38.24:277,38,0	1/1:4,16:20:47.80:371,48,0	1/1:1,14:16:11.40:230,11,0	0/0:12,0:12:35.81:0,36,346	0/0:24,0:24:62.11:0,62,599	0/1:10,17:26:27.17:195,0,27	1/1:4,17:22:31.72:365,32,0	1/1:6,21:27:59.73:464,60,0	1/1:2,9:11:23.89:183,24,0
chr10	68653182	.	TAC	T	1512.39	PASS	AB=0.955;AC=27;AF=0.563;AN=48;BaseQRankSum=-0.469;DP=595;FS=2.188;HRun=0;HaplotypeScore=103.2622;InbreedingCoeff=0.2562;MQ=58.22;MQ0=14;MQRankSum=2.502;QD=4.01;ReadPosRankSum=2.317;VQSLOD=1.9954;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:24,5:28:23.16:171,0,23	./.	./.	./.	1/1:23,0:23:2.84:14,3,0	1/1:21,3:22:21.04:218,21,0	1/1:30,1:28:12.03:127,12,0	0/0:39,0:31:4.03:0,4,19	1/1:14,2:15:2.05:54,2,0	0/0:22,0:20:7.65:0,8,23	./.	0/0:14,0:14:18.03:0,18,239	0/0:14,0:12:3.01:0,3,36	0/0:7,0:7:3.01:0,3,44	1/1:13,1:12:3:32,3,0	1/1:13,1:14:3.01:32,3,0	1/1:19,7:26:21.05:226,21,0	0/1:16,1:15:17.19:17,0,162	1/1:15,2:15:6.02:64,6,0	1/1:13,0:13:3.01:31,3,0	1/1:61,9:61:55.61:555,56,0	0/0:21,0:20:8.49:0,8,79	0/0:17,0:16:2.99:0,3,24	0/1:39,1:37:4.45:4,0,343	0/0:11,1:9:2.37:0,2,9	0/1:19,0:17:35.19:55,0,35	0/1:15,0:14:9.20:53,0,9	1/1:4,0:4:2.50:9,2,0
chr10	68653196	.	CA	C	330.05	PASS	AB=0.928;AC=6;AF=0.107;AN=56;BaseQRankSum=4.370;DP=709;FS=5.694;HRun=1;HaplotypeScore=116.3005;InbreedingCoeff=-0.1136;MQ=45.14;MQ0=35;MQRankSum=-2.930;QD=2.66;ReadPosRankSum=-0.948;VQSLOD=-0.7071;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:35:46.43:0,46,470	0/0:12,0:11:9.03:0,9,113	0/0:18,0:5:15.04:0,15,183	0/0:28,0:16:42.13:0,42,524	0/0:24,0:23:19.61:0,20,232	0/0:32,0:28:52.28:0,52,512	0/0:41,0:34:50.99:0,51,533	0/1:21,16:19:99:396,0,108	0/1:16,1:15:13.99:14,0,277	0/1:22,2:18:6.11:6,0,392	0/0:7,0:4:3.01:0,3,38	0/0:23,0:21:39.13:0,39,554	0/0:16,0:14:31.52:0,32,426	0/0:13,0:13:15.52:0,16,202	0/0:20,0:15:27.15:0,27,278	0/0:19,0:15:23.29:0,23,272	0/0:32,0:31:46.85:0,47,449	0/0:23,1:21:15.16:0,15,632	0/0:18,0:15:34.24:0,34,351	0/0:15,1:14:14.85:0,15,146	0/0:97,3:85:99:0,106,1042	0/1:24,0:22:1.32:1,0,227	0/0:18,0:15:21.07:0,21,276	0/0:49,0:44:86.17:0,86,1125	0/1:17,0:14:7.86:8,0,108	0/0:25,1:23:55.59:0,56,654	0/0:13,0:12:18.31:0,18,174	0/1:5,0:4:10.04:10,0,67
chr10	68653402	.	TCACACACACA	T	1395.77	PASS	AB=0.947;AC=14;AF=0.250;AN=56;BaseQRankSum=1.286;DP=687;FS=50.166;HRun=0;HaplotypeScore=150.7743;InbreedingCoeff=-0.1855;MQ=34.49;MQ0=70;MQRankSum=-1.821;QD=5.54;ReadPosRankSum=0.665;VQSLOD=1.1741;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:22:31.94:0,32,1019	0/1:6,0:5:31.17:31,0,129	0/0:49,0:2:5.96:0,6,46	0/0:68,0:7:12.48:0,12,141	0/0:15,0:15:21.07:0,21,655	0/1:12,6:15:28.12:400,0,28	0/1:23,8:27:99:295,0,109	0/0:71,0:42:99:0,101,2014	0/0:14,0:12:14.99:0,15,200	0/0:45,0:39:93.21:0,93,2359	0/0:12,0:11:15:0,15,497	0/1:17,3:17:56.11:184,0,56	0/1:13,0:10:87.98:88,0,200	0/1:19,0:17:48.08:97,0,48	0/1:13,1:7:65.71:117,0,66	0/1:9,1:7:99:144,0,108	0/1:6,0:6:35.98:68,0,36	0/0:30,0:29:66.09:0,66,2277	0/1:18,0:6:27.01:27,0,168	0/1:13,0:11:0.08:0,0,0	0/1:66,0:44:1.96:76,0,2	0/1:12,0:10:0.20:0,0,0	0/0:22,0:19:30.08:0,30,966	0/0:47,0:45:93.36:0,93,3154	0/0:14,1:11:5.31:0,5,26	0/0:15,0:9:11.83:0,12,128	0/1:5,0:4:11.03:11,0,54	0/0:2,0:1:3.01:0,3,39
chr10	68653415	.	CCA	C	733.11	PASS	AB=0.814;AC=19;AF=0.365;AN=52;BaseQRankSum=1.350;DP=653;FS=28.899;HRun=0;HaplotypeScore=109.6528;InbreedingCoeff=-0.0565;MQ=31.97;MQ0=59;MQRankSum=-4.411;QD=2.18;ReadPosRankSum=-1.971;VQSLOD=0.0782;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:22:37.28:0,37,578	0/0:5,0:4:3.01:0,3,48	1/1:48,0:2:2.88:16,3,0	0/0:66,0:5:8.94:0,9,69	0/0:13,0:13:15.04:0,15,215	0/1:11,3:13:2.97:3,0,96	0/1:16,9:24:50.43:185,0,50	0/1:57,4:37:88:88,0,359	0/1:8,2:10:62.51:63,0,85	0/0:52,2:43:20.01:0,20,911	0/0:14,0:10:14.89:0,15,160	0/1:13,5:17:54.23:54,0,119	0/0:9,1:10:12.51:0,13,165	0/1:10,6:13:15.87:130,0,16	0/1:17,3:13:34.92:35,0,188	0/1:9,2:9:3.14:3,0,144	0/0:6,0:5:5.95:0,6,68	0/0:27,0:26:52.51:0,53,831	0/1:12,4:7:12.50:125,0,12	./.	1/1:48,3:36:2.98:22,3,0	./.	0/0:21,0:18:27.09:0,27,455	0/0:51,0:47:75.21:0,75,1236	1/1:8,3:10:2.94:35,3,0	0/1:9,3:9:57.68:60,0,58	0/1:3,2:5:26.71:27,0,97	1/1:0,1:1:3.01:39,3,0
chr10	68653428	.	CAT	C	41	PASS	AB=0.986;AC=13;AF=0.232;AN=56;BaseQRankSum=2.237;DP=582;FS=2.034;HRun=0;HaplotypeScore=106.5935;InbreedingCoeff=0.1488;MQ=31.80;MQ0=55;MQRankSum=-3.671;QD=0.22;ReadPosRankSum=-2.165;VQSLOD=1.4815;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:23:14.97:0,15,668	0/0:2,0:2:1.25:0,1,3	1/1:50,0:2:2.60:10,3,0	0/0:73,0:7:7.83:0,8,67	0/0:10,0:10:12.01:0,12,165	0/1:12,0:11:3.29:3,0,50	0/0:24,0:20:22.49:0,22,192	0/0:42,0:27:6.92:0,7,503	0/1:10,0:9:7.64:8,0,9	0/1:47,2:37:95.38:95,0,721	0/0:11,1:9:17.91:0,18,224	0/1:15,0:14:1.66:2,0,101	0/0:8,0:7:9.68:0,10,49	0/1:15,0:13:17.92:18,0,69	0/0:19,0:14:14.05:0,14,99	0/1:11,0:8:0.29:0,0,68	0/0:6,0:5:2.96:0,3,6	0/0:25,0:25:28.49:0,28,836	0/0:15,1:8:14.82:0,15,128	0/1:6,0:5:0:0,0,0	0/0:41,3:26:2.37:0,2,8	0/1:5,0:4:0.16:0,0,0	0/0:19,0:16:23.90:0,24,361	0/0:51,1:48:92.95:0,93,1626	1/1:9,0:7:3.99:15,4,0	0/0:13,0:10:0.62:0,1,107	0/1:5,0:5:4.07:4,0,50	0/0:1,0:1:2.80:0,3,13
chr10	68653440	.	CCACA	C	679.23	PASS	AB=0.920;AC=18;AF=0.333;AN=54;BaseQRankSum=3.243;DP=624;FS=22.812;HRun=0;HaplotypeScore=112.9330;InbreedingCoeff=0.1189;MQ=30.18;MQ0=89;MQRankSum=-4.740;QD=3.10;ReadPosRankSum=-0.039;VQSLOD=0.7422;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:25:35.99:0,36,867	1/1:2,1:3:3.01:53,3,0	./.	0/0:70,0:7:9:0,9,79	0/0:12,0:10:9.03:0,9,191	0/0:9,0:9:4.50:0,4,22	0/1:27,2:22:22.38:22,0,27	0/1:42,0:21:33.14:33,0,299	0/1:12,1:12:52.39:78,0,52	0/0:46,0:31:48.97:0,49,636	0/0:12,0:8:12.04:0,12,170	0/1:10,3:12:24.02:59,0,24	1/1:6,3:8:12.04:190,12,0	0/1:13,3:13:21.16:74,0,21	0/1:19,4:17:3.02:160,0,3	0/1:8,2:7:10.02:96,0,10	0/0:6,0:4:9.02:0,9,113	0/0:27,0:24:34.71:0,35,629	1/1:23,1:7:2.94:18,3,0	1/1:3,1:3:2.97:20,3,0	0/0:51,0:28:3.84:0,4,21	0/1:5,0:4:0:0,0,0	0/0:16,0:13:21.07:0,21,453	0/0:56,0:51:84.17:0,84,1993	0/0:10,0:7:2.04:0,2,6	0/1:23,0:12:25.91:26,0,92	0/1:5,0:5:0.03:0,0,0	0/0:3,0:2:2.96:0,3,19
chr10	68653451	.	CACAT	C	589.94	PASS	AB=0.956;AC=21;AF=0.404;AN=52;BaseQRankSum=4.423;DP=560;FS=20.734;HRun=0;HaplotypeScore=99.1498;InbreedingCoeff=0.2631;MQ=28.79;MQ0=87;MQRankSum=-4.929;QD=2.59;ReadPosRankSum=-0.358;VQSLOD=0.4510;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:27:41.59:0,42,955	0/1:4,0:4:1.52:31,0,2	0/0:43,0:1:2.88:0,3,15	0/0:60,0:4:11.95:0,12,106	0/0:14,0:12:9.03:0,9,212	1/1:6,1:6:2.49:9,2,0	0/1:23,1:17:6.67:63,0,7	0/1:38,0:18:89.82:90,0,298	0/1:10,0:10:58.82:72,0,59	0/0:36,0:24:50.72:0,51,772	0/0:14,0:10:15.03:0,15,267	1/1:11,1:10:3.01:35,3,0	1/1:8,1:8:12.04:149,12,0	0/1:11,1:10:1:30,0,1	1/1:23,1:17:9.02:120,9,0	1/1:10,0:6:5.99:70,6,0	0/0:7,0:5:11.73:0,12,98	0/1:27,0:23:0.02:0,0,807	0/1:20,0:5:6.97:32,0,7	1/1:1,0:1:0.89:2,1,0	0/0:44,1:22:0.88:0,1,2	0/1:3,1:3:0:0,0,0	0/0:14,0:11:20.81:0,21,475	0/0:54,0:49:92.74:0,93,2192	0/0:6,0:3:2.84:0,3,18	0/1:23,0:13:36.42:36,0,121	./.	./.
chr10	68653453	.	CAT	C	71.55	PASS	AB=0.939;AC=15;AF=0.288;AN=52;BaseQRankSum=4.617;DP=522;FS=16.515;HRun=0;HaplotypeScore=83.6515;InbreedingCoeff=0.1754;MQ=31.04;MQ0=88;MQRankSum=-3.086;QD=0.36;ReadPosRankSum=-0.557;VQSLOD=0.4817;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:42.11:0,42,708	0/0:4,0:4:1.09:0,1,9	0/0:42,0:2:5.67:0,6,28	0/0:60,0:4:5.05:0,5,53	0/0:13,0:11:9.03:0,9,163	1/1:4,0:3:2.87:15,3,0	0/1:21,0:13:6.61:30,0,7	0/1:34,1:18:41.54:42,0,203	0/1:9,0:10:13.18:13,0,67	0/0:34,0:22:30.74:0,31,348	0/0:14,0:10:15:0,15,138	0/0:7,0:5:1.25:0,1,3	1/1:7,0:6:2.99:18,3,0	0/0:9,0:7:3.24:0,3,9	1/1:22,1:16:1.15:10,1,0	1/1:8,0:4:0.39:1,0,0	0/0:7,0:5:7.56:0,8,42	0/0:26,0:22:5.29:0,5,365	0/1:17,0:4:7.10:10,0,7	0/0:1,0:1:2.88:0,3,15	0/1:37,4:21:0:0,0,0	0/1:4,0:3:0:0,0,0	0/0:14,0:11:20.43:0,20,343	0/0:55,1:51:95.73:0,96,1611	0/0:4,1:2:2.80:0,3,13	0/1:21,2:13:56.54:57,0,60	./.	./.
chr10	68653454	.	ATAC	A	234.28	PASS	AB=0.978;AC=14;AF=0.269;AN=52;BaseQRankSum=5.529;DP=514;FS=4.972;HRun=0;HaplotypeScore=85.5659;InbreedingCoeff=-0.0383;MQ=31.42;MQ0=84;MQRankSum=-3.802;QD=0.99;ReadPosRankSum=0.200;VQSLOD=1.1712;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:44.84:0,45,954	0/0:4,0:4:4.19:0,4,21	0/0:40,1:2:6.02:0,6,106	0/1:54,3:4:7.47:7,0,59	0/0:13,0:11:9.03:0,9,220	1/1:4,0:3:3.01:54,3,0	0/1:19,1:13:38.86:67,0,39	0/1:37,1:18:91.99:92,0,218	0/1:10,0:10:43.32:43,0,58	0/0:33,1:22:48.10:0,48,865	0/0:14,0:10:15.04:0,15,343	0/0:7,0:5:2.08:0,2,7	0/0:7,0:6:0.64:0,1,7	0/1:9,0:7:6.42:6,0,58	0/0:22,1:16:1.93:0,2,26	0/1:7,0:4:4.61:24,0,5	0/1:7,0:5:5.38:5,0,27	0/0:27,0:23:11.20:0,11,1002	0/1:16,1:4:15.21:15,0,47	0/0:1,0:1:2.88:0,3,15	0/1:39,0:20:0.17:0,0,0	0/0:4,0:3:1.25:0,1,3	0/0:14,0:11:18.32:0,18,427	0/0:55,1:51:95.19:0,95,2227	1/1:5,0:2:2.94:18,3,0	0/1:22,1:13:31.56:32,0,251	./.	./.
chr10	68653466	.	C	CT	31.80	PASS	AB=0.917;AC=9;AF=0.173;AN=52;BaseQRankSum=3.010;DP=527;FS=12.104;HRun=0;HaplotypeScore=87.5252;InbreedingCoeff=0.0027;MQ=30.42;MQ0=92;MQRankSum=-3.439;QD=0.17;ReadPosRankSum=0.404;VQSLOD=0.9430;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:27:39.09:0,39,518	0/0:7,0:5:2.50:0,2,9	0/0:33,0:2:6.02:0,6,84	0/0:49,0:4:11.06:0,11,110	0/0:13,0:10:8.78:0,9,123	0/0:5,0:5:6.32:0,6,54	0/1:22,0:15:13.59:14,0,74	0/1:43,1:18:14.15:14,0,274	0/1:11,0:11:26.18:26,0,74	0/1:25,2:17:44.46:44,0,281	0/0:14,0:10:14.64:0,15,166	0/0:9,0:5:3.01:0,3,42	0/0:8,0:8:11.50:0,12,108	0/0:7,0:5:9.03:0,9,117	0/0:20,0:14:10.16:0,10,125	0/0:9,0:4:3.01:0,3,42	0/1:6,2:5:20.92:21,0,62	0/0:20,1:17:39.13:0,39,545	0/1:16,0:3:7.55:8,0,33	./.	0/1:42,5:21:0.21:1,0,0	0/0:10,0:5:1.25:0,1,3	0/0:12,0:8:13.29:0,13,171	0/0:58,0:52:95.80:0,96,1268	0/0:6,0:4:3.40:0,3,17	0/0:22,0:14:26.74:0,27,307	./.	1/1:3,0:2:3:26,3,0
chr10	68653493	.	C	CCA	635.41	PASS	AB=0.977;AC=14;AF=0.292;AN=48;BaseQRankSum=0.794;DP=720;FS=12.656;HRun=0;HaplotypeScore=99.6725;InbreedingCoeff=0.0496;MQ=23.75;MQ0=136;MQRankSum=-1.546;QD=2.26;ReadPosRankSum=-0.462;VQSLOD=1.3116;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:26:26.91:0,27,273	0/1:11,0:8:3.78:4,0,6	./.	./.	0/0:16,0:11:6.02:0,6,74	0/0:11,0:5:3.50:0,4,37	0/0:28,0:21:1.38:0,1,72	0/1:71,0:30:99:126,0,398	0/1:25,0:14:28.26:28,0,38	0/1:47,1:26:99:174,0,142	0/1:11,2:8:38.40:38,0,48	0/0:18,0:6:1.87:0,2,6	0/0:12,0:7:1.23:0,1,58	./.	1/1:25,0:11:2.94:29,3,0	1/1:10,0:5:1.24:3,1,0	0/1:11,0:5:0.57:1,0,29	1/1:14,4:14:25.85:351,26,0	0/0:37,0:7:6.02:0,6,68	0/1:16,0:7:0:0,0,0	0/0:69,0:36:7.32:0,7,40	0/1:29,0:19:5.58:6,0,29	0/0:16,0:9:5.98:0,6,74	0/0:55,0:47:47.82:0,48,577	0/0:25,0:13:5.93:0,6,41	0/0:35,0:16:3.11:0,3,143	./.	0/0:9,0:4:5.42:0,5,23
chr10	68653519	.	ACAC	A	357.34	PASS	AB=0.936;AC=13;AF=0.241;AN=54;BaseQRankSum=-0.426;DP=779;FS=23.742;HRun=0;HaplotypeScore=87.5874;InbreedingCoeff=-0.0461;MQ=28.16;MQ0=142;MQRankSum=-1.269;QD=1.26;ReadPosRankSum=-2.766;VQSLOD=-0.6127;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:23:30.04:0,30,583	0/0:11,0:8:5.28:0,5,22	0/0:65,0:5:12.04:0,12,231	0/0:75,0:4:12.04:0,12,207	0/0:18,1:14:9.03:0,9,203	0/0:10,0:4:5.99:0,6,69	0/0:22,0:13:4.31:0,4,24	0/1:77,2:36:24.53:25,0,952	0/1:21,2:11:96.66:131,0,97	0/0:59,0:36:81.74:0,82,1475	0/0:10,0:5:3.01:0,3,68	1/1:15,2:8:2.98:38,3,0	0/1:12,1:8:34.86:35,0,147	1/1:15,2:9:1.63:47,2,0	0/0:21,0:8:6.46:0,6,38	0/1:6,1:4:31.94:32,0,48	0/0:7,0:2:1.85:0,2,43	0/0:19,0:13:19.52:0,20,456	0/1:36,1:6:28.86:29,0,84	0/0:17,1:12:0.47:0,0,1	0/0:56,2:27:6.49:0,6,110	0/1:27,1:21:58.23:58,0,122	0/0:14,1:10:3.02:0,3,6	0/0:51,0:40:35.33:0,35,1056	0/1:25,2:14:8.08:8,0,42	0/1:27,1:9:61.97:62,0,304	./.	0/1:7,1:3:0.83:32,0,1
chr10	68653544	.	CAG	C	157.74	PASS	AB=0.926;AC=14;AF=0.333;AN=42;BaseQRankSum=1.203;DP=424;FS=13.071;HRun=0;HaplotypeScore=54.0972;InbreedingCoeff=0.2365;MQ=46.52;MQ0=62;MQRankSum=-1.203;QD=1.68;ReadPosRankSum=-1.356;VQSLOD=-0.0831;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:22:18.25:18,0,118	1/1:5,0:5:5.18:26,5,0	0/0:101,0:10:23.12:0,23,380	0/0:110,0:16:15.50:0,16,253	0/1:12,3:13:23.82:24,0,68	./.	0/1:7,0:5:0:0,0,0	0/0:13,0:7:14.74:0,15,107	./.	0/1:23,4:22:99:168,0,217	0/0:2,3:3:2.99:0,3,23	./.	0/0:5,0:5:3.01:0,3,32	1/1:4,0:4:2.94:18,3,0	./.	0/0:2,0:1:3.01:0,3,38	1/1:2,0:1:2.37:8,2,0	0/0:8,0:7:11.97:0,12,109	./.	0/0:3,0:3:0:0,0,0	0/0:14,0:8:2.97:0,3,20	1/1:8,0:5:3.07:11,3,0	0/0:7,0:6:2.94:0,3,18	0/0:32,2:32:30.04:0,30,364	./.	0/0:4,0:1:3.01:0,3,37	./.	1/1:2,0:2:1.25:3,1,0
chr10	68653566	.	ACTCG	A	31.35	PASS	AB=0.750;AC=8;AF=0.333;AN=24;BaseQRankSum=3.239;DP=227;FS=3.881;HRun=0;HaplotypeScore=62.0505;InbreedingCoeff=0.3651;MQ=69.87;MQ0=19;MQRankSum=-0.755;QD=2.09;ReadPosRankSum=-0.708;VQSLOD=1.1866;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:15:11.50:0,11,211	1/1:1,1:2:3.01:59,3,0	0/0:51,1:11:0.25:0,0,255	0/0:75,2:22:20.23:0,20,218	0/0:10,0:10:9.03:0,9,144	./.	./.	./.	./.	0/1:9,0:8:6.18:6,0,105	./.	./.	./.	./.	./.	./.	1/1:0,0:1:2.99:24,3,0	0/0:6,0:6:5.95:0,6,42	./.	./.	./.	0/1:0,2:2:0:0,0,0	0/0:7,0:6:2.15:0,2,43	0/0:22,1:23:22.61:0,23,549	./.	1/1:0,1:1:3.01:35,3,0	./.	./.
chr10	68657936	.	G	GT	995.57	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-5.186;DP=753;FS=3.408;HRun=1;HaplotypeScore=73.0661;InbreedingCoeff=0.9958;MQ=61.36;MQ0=4;MQRankSum=-7.071;QD=34.33;ReadPosRankSum=-4.864;VQSLOD=1.9747;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,1:43:84.41:0,84,1501	0/0:14,0:14:42.14:0,42,545	0/0:30,1:26:36.16:0,36,782	0/0:30,0:22:60.16:0,60,742	0/0:27,0:27:81.24:0,81,1022	0/0:26,0:26:78.25:0,78,1012	0/0:22,0:22:63.20:0,63,817	1/1:2,27:29:81.12:1090,81,0	0/0:28,0:28:84.27:0,84,1090	0/0:22,0:22:63.16:0,63,785	0/0:20,0:19:57.19:0,57,739	0/0:29,0:29:84.26:0,84,1075	0/0:23,0:23:60.19:0,60,779	0/0:23,0:23:69.19:0,69,866	0/0:22,0:22:66.20:0,66,834	0/0:30,0:30:90.28:0,90,1153	0/0:36,0:36:99:0,102,1308	0/0:36,0:35:85.32:0,85,1286	0/0:25,0:25:72.23:0,72,925	0/0:37,0:37:99:0,111,1440	0/0:36,0:36:99:0,105,1363	0/0:28,0:28:84.24:0,84,1061	0/0:19,0:19:57.17:0,57,726	0/0:34,0:34:93.26:0,93,1185	0/0:15,0:15:45.12:0,45,568	0/0:31,0:31:90.29:0,90,1157	0/0:29,0:29:84.27:0,84,1090	0/0:8,0:8:21.07:0,21,273
chr10	68658420	.	T	TGTGCACAGA	5424.80	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-9.184;DP=748;FS=0.000;HRun=0;HaplotypeScore=226.7264;InbreedingCoeff=0.9684;MQ=69.13;MQ0=0;MQRankSum=-7.364;QD=108.50;ReadPosRankSum=-2.332;VQSLOD=4.4940;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:59,0:59:99:0,172,4815	0/0:10,0:10:27.09:0,27,852	0/0:5,0:5:12.04:0,12,311	0/0:16,0:15:42.12:0,42,1072	0/0:24,0:24:63.06:0,63,1668	0/0:18,0:18:48.13:0,48,1276	0/0:23,0:23:69.24:0,69,2159	1/1:8,17:50:99:5425,135,0	0/0:22,0:22:63.20:0,63,1752	0/0:20,0:20:57.17:0,57,1465	0/0:28,0:28:60.14:0,60,1553	0/0:28,0:28:78.13:0,78,2322	0/0:31,0:31:93.32:0,93,2884	0/0:24,0:24:72.21:0,72,2046	0/0:34,0:34:99:0,102,2717	0/0:28,0:28:84.29:0,84,2589	0/0:37,0:37:99:0,108,3209	0/0:17,0:17:51.18:0,51,1546	0/0:28,0:28:81.28:0,81,2288	0/0:20,0:20:57.15:0,57,1477	0/0:55,0:55:99:0,150,4209	0/0:26,0:26:72.21:0,72,1978	0/0:32,0:32:83.97:0,84,2214	0/0:35,0:35:99:0,105,3214	0/0:18,0:18:50.98:0,51,1347	0/0:31,0:31:87.29:0,87,2390	0/0:20,0:20:54.19:0,54,1683	0/0:9,0:9:27.09:0,27,844
chr10	68658570	.	A	AT	618.74	PASS	AB=0.909;AC=3;AF=0.054;AN=56;BaseQRankSum=-5.355;DP=503;FS=1.791;HRun=8;HaplotypeScore=52.5252;InbreedingCoeff=0.6781;MQ=68.57;MQ0=6;MQRankSum=-3.769;QD=17.19;ReadPosRankSum=-3.831;VQSLOD=2.7181;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:26:63.01:0,63,571	0/0:9,0:9:26.99:0,27,240	0/0:25,0:19:23.23:0,23,252	0/0:15,0:9:20.93:0,21,181	0/0:22,0:22:57.01:0,57,517	0/0:14,0:14:36.01:0,36,329	0/0:21,0:21:48:0,48,439	1/1:7,19:26:63.15:712,63,0	0/0:16,0:16:42:0,42,379	0/0:13,0:13:39.02:0,39,357	0/0:12,0:12:30.01:0,30,275	0/0:14,0:13:30.01:0,30,275	0/0:21,0:21:51.02:0,51,467	0/0:18,0:18:45.02:0,45,412	0/0:16,0:16:36:0,36,329	0/0:13,0:12:33.02:0,33,302	0/0:36,0:36:93.02:0,93,845	0/0:11,0:11:32.97:0,33,294	0/0:24,0:24:46.39:0,46,436	0/0:18,0:18:48.02:0,48,439	0/0:16,0:16:33:0,33,297	0/0:19,0:19:47.98:0,48,429	0/0:19,0:19:51.02:0,51,467	0/0:8,0:8:21.01:0,21,192	0/0:16,0:16:39.02:0,39,356	0/0:22,0:22:57.03:0,57,521	0/0:21,0:21:44.99:0,45,412	0/1:9,1:10:7.61:8,0,193
chr10	68658675	.	A	AT	739.24	PASS	AB=0.974;AC=6;AF=0.107;AN=56;BaseQRankSum=-3.173;DP=400;FS=10.400;HRun=10;HaplotypeScore=72.0557;InbreedingCoeff=0.5623;MQ=67.82;MQ0=12;MQRankSum=-4.366;QD=8.50;ReadPosRankSum=-0.497;VQSLOD=1.1576;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:16:38.95:0,39,320	0/0:7,0:7:20.98:0,21,172	0/1:27,0:12:6.50:6,0,46	0/0:20,0:7:7.32:0,7,38	0/0:23,0:22:49.66:0,50,381	0/0:9,0:9:23.97:0,24,197	0/1:17,1:15:5:5,0,170	0/0:15,0:15:29.85:0,30,237	0/0:7,0:7:14.98:0,15,123	1/1:12,8:18:42.10:441,42,0	1/1:7,15:22:39.10:415,39,0	0/0:13,0:13:29.96:0,30,246	0/0:3,0:3:8.96:0,9,68	0/0:8,0:8:23.97:0,24,197	0/0:7,0:8:17:0,17,129	0/0:7,0:8:23.01:0,23,178	0/0:16,0:16:26.82:0,27,209	0/0:12,0:11:29.56:0,30,232	0/0:16,0:16:24.76:0,25,209	0/0:14,0:15:43.99:0,44,351	0/0:18,0:17:23.37:0,23,323	0/0:19,0:19:50.90:0,51,414	0/0:14,1:15:0.24:0,0,213	0/0:5,0:5:14.98:0,15,123	0/0:6,0:7:11.98:0,12,99	0/0:22,0:21:53.93:0,54,443	0/0:19,0:18:47.88:0,48,386	0/0:8,0:8:17.98:0,18,148
chr10	68658691	.	TAAA	T	6651.51	PASS	AB=0.696;AC=37;AF=0.661;AN=56;BaseQRankSum=-3.313;DP=427;FS=0.875;HRun=12;HaplotypeScore=75.4432;InbreedingCoeff=0.7266;MQ=69.63;MQ0=1;MQRankSum=1.571;QD=24.73;ReadPosRankSum=5.541;VQSLOD=3.7379;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:57.20:0,57,1079	1/1:2,6:8:18.04:227,18,0	0/0:20,0:8:5.83:0,6,37	0/1:22,0:10:16.10:16,0,192	0/0:21,0:22:63.15:0,63,1142	1/1:2,12:15:33.03:397,33,0	0/1:3,10:13:14.46:311,0,14	0/0:2,0:22:26.17:0,26,60	1/1:0,6:6:15.05:190,15,0	0/0:6,0:17:47.82:0,48,387	0/0:5,0:26:74.62:0,75,560	1/1:4,7:12:21:265,21,0	1/1:0,1:1:3.01:38,3,0	1/1:1,7:8:21.06:265,21,0	1/1:0,9:10:27.01:321,27,0	1/1:0,9:9:27.09:341,27,0	1/1:3,7:10:21.04:265,21,0	0/1:3,1:13:7.98:8,0,198	1/1:5,11:16:36.02:435,36,0	1/1:2,23:25:60.15:758,60,0	1/1:3,15:18:22.31:438,22,0	1/1:3,19:22:57.13:720,57,0	0/0:20,0:22:61.74:0,62,1092	0/0:6,0:6:18.06:0,18,355	1/1:0,12:12:24.06:303,24,0	1/1:5,13:20:44.96:526,45,0	1/1:3,18:21:48.12:598,48,0	1/1:0,7:7:18.06:227,18,0
chr10	68659347	.	T	TA	490.76	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-5.917;DP=626;FS=0.863;HRun=9;HaplotypeScore=93.3046;InbreedingCoeff=0.8298;MQ=64.74;MQ0=0;MQRankSum=1.021;QD=21.34;ReadPosRankSum=1.345;VQSLOD=4.0117;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:32:88.99:0,89,754	0/0:7,0:7:20.98:0,21,179	0/0:26,1:24:36.94:0,37,288	0/0:8,0:8:14.47:0,14,104	0/0:26,0:26:71.91:0,72,614	0/0:28,0:29:71:0,71,605	0/0:26,0:26:65.97:0,66,573	0/0:40,0:40:99:0,102,872	0/0:21,0:20:56.95:0,57,487	0/0:19,0:19:30.65:0,31,104	0/0:23,0:23:55.60:0,56,239	0/0:19,0:19:47:0,47,390	0/0:22,0:22:59.98:0,60,520	0/0:14,1:15:2.78:0,3,249	0/0:20,0:20:47.98:0,48,414	0/0:21,0:21:41.87:0,42,364	0/0:25,0:25:62.94:0,63,547	1/1:2,21:23:45.22:585,45,0	0/0:25,0:26:67.97:0,68,570	0/0:26,0:26:59.89:0,60,507	0/0:19,0:19:50.96:0,51,438	0/0:27,0:27:50.59:0,51,587	0/0:19,0:19:47.89:0,48,403	0/0:11,0:11:32.95:0,33,279	0/0:15,0:15:41.99:0,42,364	0/0:32,0:32:74.97:0,75,651	0/0:33,0:32:80.90:0,81,690	0/0:14,0:14:41.99:0,42,364
chr10	68659684	.	G	GA	5350.67	PASS	AB=0.909;AC=41;AF=0.759;AN=54;BaseQRankSum=7.439;DP=463;FS=5.892;HRun=8;HaplotypeScore=105.2052;InbreedingCoeff=0.6355;MQ=43.75;MQ0=27;MQRankSum=-7.055;QD=15.92;ReadPosRankSum=-0.944;VQSLOD=4.3642;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:49:99:0,103,915	1/1:1,7:8:18.05:207,18,0	0/1:9,0:4:17.40:20,0,17	./.	0/0:25,1:25:13.40:0,13,373	1/1:12,12:22:36.06:391,36,0	0/1:5,3:8:12.59:102,0,13	0/1:29,0:28:10.08:10,0,226	1/1:5,4:8:20.96:209,21,0	1/1:12,11:20:12.35:273,12,0	1/1:6,6:12:18.04:199,18,0	1/1:4,6:10:20.50:184,21,0	1/1:6,6:12:17.97:178,18,0	1/1:6,7:13:26.33:255,26,0	1/1:10,6:15:2.66:252,3,0	1/1:4,5:9:14.70:141,15,0	1/1:15,8:15:18.52:204,19,0	0/0:15,0:15:20.62:0,21,192	1/1:4,14:17:42.09:470,42,0	1/1:11,11:22:45.04:474,45,0	1/1:6,1:5:3:25,3,0	1/1:4,20:23:48.57:538,49,0	0/0:15,0:15:26.99:0,27,247	0/0:16,0:15:41.99:0,42,374	1/1:10,11:20:42:440,42,0	1/1:7,9:14:30.09:342,30,0	1/1:5,5:10:21.47:217,21,0	1/1:7,5:9:21.02:219,21,0
chr10	68659697	.	CA	C	1886.78	PASS	AB=0.815;AC=34;AF=0.607;AN=56;BaseQRankSum=9.751;DP=458;FS=0.940;HRun=14;HaplotypeScore=102.1529;InbreedingCoeff=0.3582;MQ=55.62;MQ0=25;MQRankSum=-7.235;QD=6.27;ReadPosRankSum=1.298;VQSLOD=2.8561;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,3:44:19.51:0,20,712	0/1:6,2:8:16.36:38,0,16	0/0:19,0:10:18.09:0,18,120	0/1:11,0:8:10.33:10,0,22	0/1:23,3:27:17.69:18,0,295	1/1:9,12:19:29.92:249,30,0	1/1:1,7:8:3.78:110,4,0	0/0:17,0:27:63.97:0,64,402	1/1:5,4:8:11.84:81,12,0	0/0:14,0:13:29.84:0,30,257	0/0:10,1:11:15.02:0,15,139	1/1:6,5:11:17.75:122,18,0	1/1:4,5:9:17.84:123,18,0	0/1:9,2:11:7.24:46,0,7	1/1:8,8:14:25.76:170,26,0	0/1:4,3:7:8.36:49,0,8	1/1:17,6:15:25.71:170,26,0	0/0:5,0:19:34.22:0,34,178	1/1:12,5:14:12.58:98,13,0	0/1:11,9:20:10.15:102,0,10	1/1:1,2:1:2.98:21,3,0	1/1:16,9:24:5.30:149,5,0	0/0:14,0:17:19.52:0,20,288	0/1:12,2:14:11.29:11,0,179	1/1:8,12:19:21.93:211,22,0	0/1:10,6:15:3.05:108,0,3	1/1:5,5:10:13.65:86,14,0	1/1:7,7:11:0.59:103,1,0
chr10	68659711	.	ATTC	A	2365.94	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=10.478;DP=403;FS=10.426;HRun=0;HaplotypeScore=105.7806;InbreedingCoeff=0.9391;MQ=74.67;MQ0=6;MQRankSum=-7.655;QD=12.01;ReadPosRankSum=0.770;VQSLOD=2.7041;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:40:99:0,108,2112	1/1:7,0:7:8.02:74,8,0	0/0:25,0:13:31.12:0,31,432	0/0:21,0:16:24.16:0,24,560	0/0:22,0:22:54.19:0,54,1077	1/1:15,0:16:37.63:180,38,0	1/1:8,0:8:4.68:76,5,0	0/0:23,0:23:57.20:0,57,1058	1/1:9,0:8:18.74:104,19,0	0/0:14,0:14:36.12:0,36,722	0/0:11,0:11:24.08:0,24,478	1/1:11,0:11:24.87:147,25,0	1/1:9,0:10:14.45:123,14,0	1/1:5,0:6:14.33:90,14,0	1/1:10,1:10:28.38:187,28,0	1/1:4,0:4:11.48:79,11,0	1/1:15,0:15:31.56:173,32,0	0/0:18,0:18:42.14:0,42,709	1/1:11,1:11:28.34:196,28,0	1/1:15,1:16:19.47:181,19,0	1/1:3,0:2:6:53,6,0	1/1:17,1:18:28.41:179,28,0	0/0:17,0:17:42.14:0,42,833	0/0:13,0:12:30.10:0,30,575	1/1:16,0:16:39.05:225,39,0	1/1:14,2:15:37.72:290,38,0	1/1:7,1:8:18.23:113,18,0	1/1:9,0:8:20.01:116,20,0
chr10	68660372	.	G	GGAGACAGAGACA	10943.33	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=5.191;DP=699;FS=3.128;HRun=0;HaplotypeScore=291.0022;InbreedingCoeff=0.7408;MQ=72.97;MQ0=3;MQRankSum=-7.229;QD=23.58;ReadPosRankSum=-0.424;VQSLOD=3.3250;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:36.12:0,36,1148	1/1:5,0:5:6.02:274,6,0	0/0:31,0:24:3.01:0,3,61	0/0:42,0:35:0.90:0,1,40	0/0:31,0:31:42.14:0,42,1333	1/1:23,0:23:12.04:447,12,0	1/1:24,0:24:12.04:325,12,0	0/0:35,0:35:14.99:0,15,221	1/1:15,0:15:6.02:185,6,0	1/1:19,5:27:30.07:1185,30,0	1/1:18,0:19:15.05:652,15,0	1/1:19,0:19:15.05:558,15,0	1/1:22,0:22:9.03:399,9,0	1/1:23,0:23:15.05:702,15,0	1/1:22,0:22:9.02:293,9,0	1/1:45,0:44:27.09:1310,27,0	1/1:29,0:29:27.03:882,27,0	1/1:13,0:13:3.01:76,3,0	1/1:18,0:17:12.04:539,12,0	1/1:23,0:23:7.27:178,7,0	1/1:14,0:14:2.97:20,3,0	1/1:25,0:24:10.49:440,10,0	0/0:19,0:19:21.07:0,21,718	0/0:33,0:33:54.14:0,54,1746	1/1:19,0:19:6.37:231,6,0	1/1:30,0:30:21.06:831,21,0	1/1:40,0:40:33.04:997,33,0	1/1:9,0:9:12.04:420,12,0
chr10	68660662	.	GCCC	G	794.89	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=4.669;DP=359;FS=35.573;HRun=13;HaplotypeScore=66.7115;InbreedingCoeff=0.6810;MQ=74.27;MQ0=1;MQRankSum=-0.949;QD=16.22;ReadPosRankSum=1.364;VQSLOD=-0.0941;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:24.05:0,24,378	0/0:4,0:4:3.01:0,3,43	0/0:19,0:14:6.08:0,6,231	0/0:14,0:13:22.25:0,22,196	0/0:19,0:19:19.52:0,20,419	0/0:7,0:7:15.05:0,15,243	0/0:17,0:18:20.52:0,21,243	1/1:11,1:27:36.23:223,36,0	0/0:5,0:5:12.03:0,12,165	0/0:10,0:10:18.02:0,18,206	0/0:14,0:15:32.90:0,33,383	0/0:11,0:11:17.96:0,18,258	0/0:8,0:8:12.04:0,12,186	0/0:17,0:17:26.86:0,27,368	0/0:11,0:12:20.53:0,21,229	0/0:16,0:16:30.10:0,30,452	0/0:16,0:16:27.09:0,27,421	1/1:0,22:22:57.16:692,57,0	0/0:12,0:12:15.04:0,15,219	0/0:7,0:7:12.04:0,12,186	0/0:14,0:14:11.67:0,12,183	0/0:8,0:8:9:0,9,134	0/0:6,0:11:15.35:0,15,185	0/0:15,0:19:42.45:0,42,640	0/0:10,0:10:12.04:0,12,200	0/0:7,0:7:3.01:0,3,57	0/0:11,0:11:12.03:0,12,163	0/0:3,0:3:9.03:0,9,144
chr10	68660675	.	C	CCA	3233.06	PASS	AB=0.673;AC=36;AF=0.643;AN=56;BaseQRankSum=3.943;DP=434;FS=90.791;HRun=0;HaplotypeScore=95.5219;InbreedingCoeff=0.3920;MQ=83.88;MQ0=0;MQRankSum=-1.996;QD=9.95;ReadPosRankSum=-1.630;VQSLOD=-0.2686;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:13.61:0,14,97	1/1:1,0:1:1.25:3,1,0	0/0:19,0:16:10.16:0,10,177	0/0:21,0:20:8.15:0,8,126	0/0:23,0:23:14.07:0,14,233	1/1:13,0:14:2.41:237,2,0	0/1:2,0:15:1.85:64,0,2	1/1:20,0:20:41.05:233,41,0	0/1:9,0:9:0.71:134,0,1	1/1:14,0:14:19.95:242,20,0	0/1:15,0:15:17.08:59,0,17	1/1:8,0:10:19.40:186,19,0	1/1:8,0:8:23.93:206,24,0	1/1:15,0:18:24.69:259,25,0	1/1:2,0:15:11.14:65,11,0	0/1:5,0:24:0.63:90,0,1	0/1:5,0:18:5.95:41,0,6	1/1:27,0:27:66.65:341,67,0	1/1:3,0:16:1.38:238,1,0	0/1:4,0:12:19.29:105,0,19	0/1:5,0:26:3.04:20,0,3	1/1:12,0:14:24.39:214,24,0	0/0:13,0:13:14.09:0,14,108	0/0:21,0:21:26.06:0,26,215	0/1:3,0:14:10.74:11,0,13	1/1:1,9:11:26.96:225,27,0	1/1:18,0:18:26.87:403,27,0	1/1:1,0:6:5.85:34,6,0
chr10	68661591	.	CTT	C	1598.48	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.553;DP=630;FS=0.597;HRun=4;HaplotypeScore=75.7742;InbreedingCoeff=0.9831;MQ=89.73;MQ0=1;MQRankSum=-1.172;QD=37.17;ReadPosRankSum=1.919;VQSLOD=3.0968;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,111,2070	0/0:13,0:13:39.13:0,39,701	0/0:24,0:24:59.38:0,59,1079	0/0:27,0:26:60.09:0,60,1010	0/0:21,0:21:63.21:0,63,1149	0/0:34,0:34:99:0,99,1771	0/0:17,0:17:51.17:0,51,926	0/0:41,0:41:99:0,114,2022	0/0:23,0:23:66.23:0,66,1236	1/1:1,27:28:81.27:1191,81,0	1/1:1,14:14:36.12:529,36,0	0/0:27,0:27:78.27:0,78,1461	0/0:17,0:17:51.17:0,51,950	0/0:17,0:17:51.11:0,51,889	0/0:36,0:36:99:0,105,1967	0/0:26,0:26:75.25:0,75,1376	0/0:8,0:8:24.07:0,24,418	0/0:13,0:13:39.13:0,39,730	0/0:20,0:20:60.14:0,60,1057	0/0:28,0:28:81.27:0,81,1488	0/0:28,0:28:84.29:0,84,1567	0/0:13,0:13:39.12:0,39,672	0/0:22,0:22:60.21:0,60,1124	0/0:18,0:18:51.14:0,51,864	0/0:17,0:17:51.14:0,51,920	0/0:22,0:22:63.22:0,63,1177	0/0:32,0:32:90.27:0,90,1592	0/0:4,0:4:12.03:0,12,193
chr10	68662181	.	C	CTT	6890.67	PASS	AB=0.635;AC=38;AF=0.679;AN=56;BaseQRankSum=-5.433;DP=497;FS=8.304;HRun=10;HaplotypeScore=54.3213;InbreedingCoeff=0.7226;MQ=62.78;MQ0=4;MQRankSum=-0.284;QD=20.33;ReadPosRankSum=-0.110;VQSLOD=2.9526;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:44:95.65:0,96,1081	0/1:0,2:3:0:0,0,0	0/0:13,0:10:15.98:0,16,123	0/0:14,0:9:11.80:0,12,117	0/0:20,0:23:53.53:0,54,504	1/1:4,18:24:45.14:638,45,0	1/1:6,19:23:45.01:626,45,0	0/0:30,0:26:30.17:0,30,362	1/1:2,8:11:24.07:342,24,0	0/1:9,0:23:21.80:93,0,22	0/1:7,0:17:3.64:85,0,4	1/1:3,13:16:30.10:447,30,0	1/1:0,10:10:15.05:224,15,0	1/1:6,5:11:18.02:243,18,0	1/1:0,12:13:24.08:358,24,0	1/1:5,9:14:27.07:365,27,0	1/1:6,22:30:50.57:680,51,0	1/1:3,0:11:12.02:114,12,0	0/1:11,3:14:15.42:148,0,15	1/1:1,12:14:32.92:370,33,0	1/1:5,11:18:27.08:386,27,0	1/1:0,8:7:15.05:224,15,0	0/0:13,0:13:33.06:0,33,336	0/0:19,0:19:31.40:0,31,469	1/1:7,4:12:8.52:98,9,0	1/1:8,17:27:51.92:645,52,0	1/1:3,11:15:17.89:225,18,0	1/1:4,15:17:39.13:582,39,0
chr10	68663230	.	G	GA	823.88	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-6.782;DP=782;FS=13.725;HRun=9;HaplotypeScore=78.9458;InbreedingCoeff=0.9994;MQ=77.52;MQ0=4;MQRankSum=-1.377;QD=21.13;ReadPosRankSum=-6.132;VQSLOD=1.0656;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,117,1001	0/0:12,0:12:32.95:0,33,280	0/0:40,0:30:44.25:0,44,375	0/0:26,0:20:35.45:0,35,273	0/0:28,0:29:79.99:0,80,676	0/0:20,0:20:50.90:0,51,426	0/0:21,0:23:62.02:0,62,527	1/1:10,29:39:87.14:919,87,0	0/0:30,0:30:80.95:0,81,696	0/0:36,0:36:99:0,105,907	0/0:18,0:18:41.98:0,42,362	0/0:19,0:19:53.97:0,54,463	0/0:27,0:29:76:0,76,625	0/0:25,0:25:62.86:0,63,536	0/0:32,0:32:80.94:0,81,696	0/0:21,0:22:59.02:0,59,501	0/0:41,0:41:99:0,117,978	0/0:20,0:20:50.96:0,51,436	0/0:24,0:24:59.96:0,60,518	0/0:31,0:31:71.91:0,72,613	0/0:28,0:28:74.91:0,75,640	0/0:28,0:27:71.96:0,72,621	0/0:24,0:24:62.93:0,63,534	0/0:30,0:32:88.04:0,88,737	0/0:29,0:30:82.98:0,83,702	0/0:26,0:26:74.96:0,75,645	0/0:33,0:33:89.97:0,90,781	0/0:17,1:18:38.03:0,38,399
chr10	68664210	.	TA	T	852.85	PASS	AB=0.918;AC=9;AF=0.161;AN=56;BaseQRankSum=3.438;DP=610;FS=0.000;HRun=12;HaplotypeScore=104.4996;InbreedingCoeff=0.3388;MQ=67.24;MQ0=0;MQRankSum=0.556;QD=5.72;ReadPosRankSum=-2.870;VQSLOD=1.7696;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,2:42:35.16:0,35,859	0/0:6,0:6:14.63:0,15,89	0/0:21,0:17:10.59:0,11,100	0/1:10,0:9:10.72:11,0,84	0/0:27,0:30:48.32:0,48,446	0/1:18,2:20:11.21:11,0,222	0/1:19,2:21:20.98:21,0,169	0/1:32,2:34:29.31:29,0,294	0/0:21,1:22:16.18:0,16,276	1/1:1,26:27:77.29:587,77,0	1/1:1,14:16:43.87:331,44,0	0/0:25,0:25:49.88:0,50,301	0/0:31,0:31:54.12:0,54,438	0/0:18,0:18:44.43:0,44,280	0/0:25,2:27:23.78:0,24,334	0/0:21,0:21:41.12:0,41,275	0/0:18,0:18:52.90:0,53,329	0/0:20,0:20:47.05:0,47,294	0/0:19,0:19:40.91:0,41,254	0/0:25,0:25:58.57:0,59,356	0/0:25,0:25:46.95:0,47,369	0/0:25,1:26:44.12:0,44,385	0/0:12,0:12:33.07:0,33,335	0/1:18,2:20:13.21:13,0,394	0/0:13,1:14:17.54:0,18,198	0/0:22,2:24:17.55:0,18,279	0/0:27,0:27:40.39:0,40,351	0/0:7,0:7:17.81:0,18,120
chr10	68664381	.	TAGAC	T	16543.10	PASS	AB=0.536;AC=37;AF=0.661;AN=56;BaseQRankSum=11.877;DP=656;FS=2.290;HRun=0;HaplotypeScore=113.9807;InbreedingCoeff=0.9190;MQ=69.49;MQ0=0;MQRankSum=-4.890;QD=39.67;ReadPosRankSum=5.575;VQSLOD=4.9840;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,114,2712	1/1:1,15:16:33.11:626,33,0	0/0:24,0:22:65.22:0,65,1331	0/0:26,0:25:71.66:0,72,1550	0/0:27,0:27:81.26:0,81,1990	1/1:1,31:32:63.21:1163,63,0	1/1:2,16:18:39.13:734,39,0	1/1:3,28:31:84.22:1390,84,0	1/1:1,24:25:54.18:982,54,0	0/0:31,0:31:87.27:0,87,2183	0/0:25,0:25:75.24:0,75,1915	1/1:1,23:24:57.19:1056,57,0	1/1:0,15:15:39.13:736,39,0	1/1:0,13:13:30.10:565,30,0	1/1:2,16:18:36.12:682,36,0	1/1:0,22:22:51.17:961,51,0	1/1:0,23:23:48.16:901,48,0	0/0:18,0:18:51.07:0,51,1114	1/1:1,17:18:51.07:852,51,0	1/1:1,31:32:57.20:1071,57,0	1/1:2,22:24:36.59:671,37,0	1/1:2,26:28:48.16:905,48,0	0/0:23,0:23:66.20:0,66,1637	0/0:18,0:18:51.18:0,51,1359	1/1:1,18:19:42.14:789,42,0	0/1:4,26:30:99:1207,0,101	1/1:3,20:23:48.16:910,48,0	1/1:0,6:6:18.06:341,18,0
chr10	68668124	.	CT	C	1441.48	PASS	AB=0.752;AC=28;AF=0.500;AN=56;BaseQRankSum=0.766;DP=482;FS=6.320;HRun=16;HaplotypeScore=70.4570;InbreedingCoeff=0.0456;MQ=63.17;MQ0=15;MQRankSum=1.478;QD=4.20;ReadPosRankSum=3.398;VQSLOD=1.0738;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,2:31:0.74:0,1,317	0/1:4,7:12:2.52:91,0,3	0/1:14,0:7:4.06:4,0,4	0/0:13,0:9:5.29:0,5,23	0/0:27,0:25:21.25:0,21,161	0/1:13,3:19:11.58:79,0,12	0/1:8,7:14:25.28:73,0,25	0/0:22,1:30:32.93:0,33,256	0/1:8,6:13:27.05:68,0,27	0/1:18,2:21:7.96:8,0,190	0/1:15,4:19:3.85:4,0,174	0/1:4,10:13:7.99:65,0,8	0/1:9,0:10:4.98:5,0,37	0/1:5,5:10:13.63:42,0,14	1/1:6,3:10:16.03:86,16,0	1/1:3,8:13:21.64:119,22,0	1/1:7,15:24:7.82:126,8,0	0/0:5,0:6:12.66:0,13,61	1/1:9,5:15:21.20:123,21,0	1/1:17,8:26:2.03:112,2,0	0/1:6,1:10:4.33:68,0,4	0/1:9,7:15:36.04:36,0,58	0/0:14,1:13:11.77:0,12,191	0/0:12,0:12:17.92:0,18,144	1/1:14,4:21:34.50:165,34,0	0/1:16,7:22:36.20:119,0,36	1/1:7,13:19:29.15:179,29,0	0/1:6,3:7:13.40:42,0,13
chr10	68669199	.	AG	A	469.94	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.465;DP=667;FS=0.000;HRun=4;HaplotypeScore=63.5911;InbreedingCoeff=0.9916;MQ=83.60;MQ0=0;MQRankSum=-0.563;QD=24.73;ReadPosRankSum=-3.626;VQSLOD=1.5786;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,141,1952	0/0:6,0:6:18.06:0,18,249	0/0:13,0:13:39.13:0,39,546	0/0:27,0:27:69.21:0,69,929	0/0:29,0:29:81.27:0,81,1129	0/0:24,0:24:69.23:0,69,966	0/0:17,0:17:51.17:0,51,713	1/1:2,17:19:48.13:565,48,0	0/0:14,0:14:39.13:0,39,546	0/0:28,0:28:81.26:0,81,1115	0/0:20,0:20:57.19:0,57,798	0/0:19,0:19:57.18:0,57,783	0/0:21,0:21:60.20:0,60,840	0/0:23,0:23:69.23:0,69,966	0/0:24,0:24:72.23:0,72,992	0/0:34,0:34:99:0,99,1387	0/0:35,0:35:99:0,99,1386	0/0:14,0:14:39.13:0,39,546	0/0:22,0:22:60.17:0,60,806	0/0:28,0:28:78.26:0,78,1092	0/0:40,0:40:99:0,117,1604	0/0:19,0:19:57.19:0,57,798	0/0:21,0:21:63.21:0,63,876	0/0:21,0:21:60.20:0,60,840	0/0:20,0:20:57.19:0,57,798	0/0:37,0:37:99:0,108,1495	0/0:34,0:34:93.29:0,93,1284	0/0:11,0:11:33.11:0,33,451
chr10	68671721	.	A	AAAAC	10107.54	PASS	AC=42;AF=0.778;AN=54;BaseQRankSum=-7.587;DP=419;FS=1.345;HRun=0;HaplotypeScore=65.8828;InbreedingCoeff=0.8246;MQ=56.53;MQ0=2;MQRankSum=-0.591;QD=34.73;ReadPosRankSum=-2.127;VQSLOD=4.3591;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:31:63.20:0,63,954	1/1:0,3:3:6.02:143,6,0	./.	0/0:22,0:17:2.92:0,3,88	0/0:7,0:7:12.03:0,12,169	1/1:6,7:14:18.06:427,18,0	1/1:8,8:16:21.07:498,21,0	0/0:18,0:33:12.47:0,12,113	1/1:6,15:21:33.11:782,33,0	1/1:1,1:7:15.03:247,15,0	1/1:6,0:9:3.01:52,3,0	1/1:5,9:14:30.10:710,30,0	1/1:3,10:13:24.08:569,24,0	1/1:2,9:11:21.07:498,21,0	1/1:6,9:15:27.09:639,27,0	1/1:6,7:13:21.07:498,21,0	1/1:12,14:27:39.13:925,39,0	1/1:7,7:16:18.06:427,18,0	1/1:19,8:24:24.08:569,24,0	1/1:1,5:6:14.97:299,15,0	1/1:9,18:28:42.14:997,42,0	1/1:2,3:5:12.04:243,12,0	0/0:3,0:3:3.01:0,3,47	0/0:21,0:21:38.16:0,38,614	1/1:1,7:8:18.06:427,18,0	1/1:8,6:15:21.07:469,21,0	1/1:9,10:19:21.07:498,21,0	1/1:2,2:4:9.03:191,9,0
chr10	68671909	.	TC	T	4393.02	PASS	AB=0.619;AC=43;AF=0.827;AN=52;BaseQRankSum=0.065;DP=322;FS=4.917;HRun=2;HaplotypeScore=30.8318;InbreedingCoeff=0.5650;MQ=33.38;MQ0=72;MQRankSum=-2.166;QD=16.64;ReadPosRankSum=-0.247;VQSLOD=4.4224;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:23:56.92:0,57,704	1/1:2,1:2:3.01:39,3,0	./.	./.	0/0:7,0:7:9.03:0,9,128	1/1:4,9:11:1.09:212,1,0	1/1:6,6:10:20.96:216,21,0	1/1:9,14:19:39.05:459,39,0	1/1:0,8:8:18.06:232,18,0	0/1:5,8:9:16.10:245,0,16	1/1:3,3:4:2.30:51,2,0	1/1:1,7:7:12.04:155,12,0	1/1:4,6:7:8.74:116,9,0	1/1:6,7:9:18.06:232,18,0	1/1:5,9:11:24.08:309,24,0	1/1:1,9:9:12.04:155,12,0	1/1:8,10:13:15.05:193,15,0	1/1:9,7:9:15.05:194,15,0	1/1:8,9:11:27.01:307,27,0	1/1:3,3:3:9:98,9,0	1/1:4,2:4:3.01:38,3,0	1/1:3,1:3:3.01:39,3,0	0/0:13,0:9:14.97:0,15,154	0/0:12,0:5:6:0,6,67	1/1:4,6:6:9.03:116,9,0	1/1:2,12:12:36.06:409,36,0	1/1:6,20:23:35.96:464,36,0	1/1:10,4:7:9.03:114,9,0
chr10	68672526	.	T	TA	602.42	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-5.769;DP=397;FS=1.729;HRun=9;HaplotypeScore=39.7886;InbreedingCoeff=0.6926;MQ=76.77;MQ0=0;MQRankSum=0.146;QD=26.19;ReadPosRankSum=1.765;VQSLOD=4.0442;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:35.97:0,36,308	0/0:4,0:4:9:0,9,78	0/0:15,0:15:25.92:0,26,238	0/0:9,0:9:0.56:0,1,44	0/0:14,0:14:32.79:0,33,262	0/0:22,0:22:50.97:0,51,443	0/0:10,0:10:23.99:0,24,208	0/0:24,0:24:62.94:0,63,540	0/0:23,0:23:62.95:0,63,541	0/0:16,0:16:44.99:0,45,390	0/0:14,0:14:38.97:0,39,335	0/0:12,0:12:32.99:0,33,286	0/0:10,0:10:29.99:0,30,260	0/0:14,0:14:38.97:0,39,335	0/0:20,0:20:50.97:0,51,439	0/0:16,0:16:44.98:0,45,391	0/0:18,0:18:50.97:0,51,439	1/1:2,21:23:63.17:697,63,0	0/0:13,0:13:32.97:0,33,285	0/0:9,0:9:26.98:0,27,230	0/0:9,0:9:20.97:0,21,176	0/0:7,0:7:20.98:0,21,179	0/0:13,0:13:29.97:0,30,260	0/0:21,0:21:59.84:0,60,503	0/0:2,0:2:6:0,6,52	0/0:15,0:15:41.99:0,42,365	0/0:23,0:23:68.99:0,69,599	0/0:7,0:7:17.99:0,18,156
chr10	68672699	.	G	GTGCATATA	3174.25	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-0.272;DP=453;FS=14.981;HRun=0;HaplotypeScore=116.9369;InbreedingCoeff=0.9808;MQ=78.66;MQ0=0;MQRankSum=-7.281;QD=70.54;ReadPosRankSum=-3.315;VQSLOD=2.2864;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:57.17:0,57,1477	0/0:5,0:5:15.05:0,15,392	0/0:18,0:17:38.99:0,39,774	0/0:13,0:13:21.07:0,21,477	0/0:15,0:15:42.13:0,42,1028	0/0:19,0:19:48.14:0,48,1217	0/0:9,0:9:18.06:0,18,446	1/1:26,5:31:66.21:2394,66,0	0/0:13,0:13:33.10:0,33,834	0/0:16,0:16:39.61:0,40,1034	0/0:18,0:18:42.14:0,42,1071	0/0:15,0:15:39.13:0,39,1023	0/0:13,0:13:30.10:0,30,794	0/0:14,0:14:42.14:0,42,1119	0/0:18,0:18:51.18:0,51,1360	0/0:11,0:11:30.09:0,30,753	0/0:26,0:25:72.25:0,72,1942	1/1:4,10:14:21.07:901,21,0	0/0:25,0:25:60.18:0,60,1494	0/0:10,0:10:27.08:0,27,669	0/0:23,0:23:63.22:0,63,1652	0/0:18,0:18:39.13:0,39,999	0/0:15,0:15:42.14:0,42,1117	0/0:11,0:11:24.08:0,24,641	0/0:18,0:18:48.16:0,48,1269	0/0:13,0:13:39.13:0,39,1025	0/0:20,0:19:54.19:0,54,1426	0/0:11,0:11:27.09:0,27,729
chr10	68672709	.	C	CT	719.54	PASS	AB=0.943;AC=4;AF=0.071;AN=56;BaseQRankSum=-0.728;DP=457;FS=9.427;HRun=8;HaplotypeScore=59.6536;InbreedingCoeff=0.5147;MQ=74.08;MQ0=2;MQRankSum=-2.643;QD=12.41;ReadPosRankSum=-2.659;VQSLOD=1.5836;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:69.03:0,69,630	0/0:6,0:6:18.01:0,18,165	0/0:19,0:16:29.98:0,30,263	0/0:15,0:10:14.40:0,14,167	0/1:15,1:16:1.57:2,0,241	0/0:21,0:21:57.03:0,57,521	0/0:10,0:10:20.99:0,21,192	1/1:7,15:25:60.17:682,60,0	0/0:15,0:15:39.01:0,39,357	0/1:16,1:17:48.07:143,0,48	0/0:17,0:17:34.26:0,34,177	0/0:15,0:15:39.01:0,39,357	0/0:11,0:11:30:0,30,269	0/0:16,0:16:38.99:0,39,352	0/0:18,0:18:48.02:0,48,439	0/0:11,0:11:33.02:0,33,302	0/0:30,0:29:84.02:0,84,762	0/0:11,0:11:28.58:0,29,215	0/0:25,0:25:69.03:0,69,631	0/0:9,0:9:24.01:0,24,220	0/0:25,0:25:69.03:0,69,631	0/0:15,0:15:36:0,36,325	0/0:16,0:16:39:0,39,357	0/0:11,0:11:30.02:0,30,275	0/0:18,0:18:45.02:0,45,411	0/0:14,0:14:33.01:0,33,302	0/0:18,0:17:45.02:0,45,412	0/0:9,0:9:27.01:0,27,247
chr10	68672933	.	C	CTGTG	2958.86	PASS	AB=0.652;AC=43;AF=0.827;AN=52;BaseQRankSum=-1.364;DP=549;FS=8.452;HRun=0;HaplotypeScore=101.0676;InbreedingCoeff=0.4508;MQ=62.56;MQ0=7;MQRankSum=-1.197;QD=7.34;ReadPosRankSum=-1.186;VQSLOD=1.5661;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:44:9.02:0,9,138	1/1:3,0:3:6.02:86,6,0	./.	./.	0/0:15,0:15:3:0,3,46	1/1:19,0:19:20.89:299,21,0	1/1:11,0:11:2.08:59,2,0	1/1:28,0:28:2.13:5,2,0	1/1:12,4:18:11.78:216,12,0	1/1:17,0:17:8.30:98,8,0	1/1:26,0:26:3.01:70,3,0	1/1:15,4:21:5.75:82,6,0	1/1:15,0:15:21.01:237,21,0	1/1:8,0:8:6.02:107,6,0	1/1:13,1:19:8.18:94,8,0	0/1:7,7:15:35.14:131,0,35	1/1:22,9:35:12.25:222,12,0	1/1:12,0:12:9.03:125,9,0	1/1:17,0:17:8.31:89,8,0	1/1:28,0:28:12.03:205,12,0	1/1:31,0:30:21.04:300,21,0	1/1:12,0:18:2.74:12,3,0	0/0:12,0:12:0.47:0,0,1	0/0:21,0:23:24.04:0,24,307	1/1:17,0:17:6:67,6,0	1/1:18,2:21:19.55:201,20,0	1/1:15,0:15:14.77:184,15,0	1/1:9,0:9:12.04:205,12,0
chr10	68674234	.	GT	G	973.73	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.411;DP=512;FS=1.370;HRun=6;HaplotypeScore=52.6173;InbreedingCoeff=0.9304;MQ=67.80;MQ0=1;MQRankSum=-1.334;QD=27.82;ReadPosRankSum=-3.825;VQSLOD=2.4588;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:47.94:0,48,605	0/0:6,0:6:18.06:0,18,237	0/0:19,0:18:45.13:0,45,559	0/0:15,0:12:4.69:0,5,247	0/0:25,0:25:66.19:0,66,841	0/0:20,0:20:54.18:0,54,710	0/0:14,0:14:42.13:0,42,538	1/1:1,19:20:57.14:613,57,0	0/0:20,0:20:51.09:0,51,633	0/0:20,0:20:54.17:0,54,696	0/0:27,0:27:66.21:0,66,861	0/0:16,0:16:42.14:0,42,553	0/0:10,0:10:30.10:0,30,395	0/0:17,0:17:45.15:0,45,592	0/0:17,0:17:45.15:0,45,592	0/0:20,0:20:54.18:0,54,710	0/0:21,0:21:54.18:0,54,710	1/1:1,14:15:45.11:483,45,0	0/0:14,0:14:33.10:0,33,420	0/0:24,0:24:63.20:0,63,827	0/0:9,0:9:24.08:0,24,316	0/0:14,0:14:39.13:0,39,513	0/0:17,0:17:39.13:0,39,513	0/0:28,0:28:75.24:0,75,987	0/0:16,0:16:45.15:0,45,592	0/0:26,0:26:69.22:0,69,908	0/0:26,0:25:69.22:0,69,908	0/0:17,0:17:51.17:0,51,671
chr10	68675259	.	CTTAA	C	1950.84	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.736;DP=592;FS=1.289;HRun=0;HaplotypeScore=93.4007;InbreedingCoeff=0.9966;MQ=84.29;MQ0=0;MQRankSum=-5.968;QD=43.35;ReadPosRankSum=-3.182;VQSLOD=3.4019;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:90.28:0,90,2326	0/0:11,0:11:33.10:0,33,835	0/0:21,0:21:56.37:0,56,1387	0/0:18,0:18:48.13:0,48,1121	0/0:24,0:24:66.23:0,66,1768	0/0:23,0:23:63.22:0,63,1691	0/0:11,0:11:27.09:0,27,728	1/1:3,34:37:96.27:1673,96,0	0/0:22,0:22:66.21:0,66,1707	0/0:30,0:30:90.31:0,90,2426	0/0:21,0:21:63.22:0,63,1697	0/0:15,0:15:45.15:0,45,1160	0/0:13,0:13:39.13:0,39,1044	0/0:15,0:15:42.14:0,42,1134	0/0:24,0:24:69.24:0,69,1830	0/0:21,0:21:63.22:0,63,1700	0/0:28,0:28:81.28:0,81,2150	1/1:1,7:8:21.07:398,21,0	0/0:24,0:24:66.22:0,66,1694	0/0:26,0:26:69.23:0,69,1809	0/0:19,0:19:54.19:0,54,1458	0/0:15,0:15:42.14:0,42,1117	0/0:21,0:21:60.21:0,60,1611	0/0:19,0:19:57.20:0,57,1523	0/0:22,0:22:66.22:0,66,1654	0/0:30,0:30:90.29:0,90,2345	0/0:30,0:30:87.28:0,87,2249	0/0:11,0:11:27.06:0,27,616
chr10	68676811	.	GTTTA	G	4852.75	PASS	AB=0.770;AC=39;AF=0.813;AN=48;BaseQRankSum=5.009;DP=281;FS=3.106;HRun=0;HaplotypeScore=52.5766;InbreedingCoeff=0.3955;MQ=61.09;MQ0=3;MQRankSum=1.091;QD=20.74;ReadPosRankSum=-0.174;VQSLOD=4.3023;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:17.96:0,18,334	1/1:2,5:7:9.03:147,9,0	./.	./.	0/0:19,0:19:24.07:0,24,536	1/1:7,8:15:18.06:295,18,0	1/1:2,2:4:6.02:98,6,0	0/1:15,23:37:3.61:641,0,4	1/1:3,1:3:3.01:49,3,0	1/1:8,0:8:9.02:98,9,0	1/1:12,0:12:27.07:296,27,0	1/1:1,2:3:6.02:98,6,0	1/1:1,0:1:2.99:24,3,0	1/1:0,2:2:6.02:98,6,0	1/1:1,4:5:9.03:147,9,0	1/1:2,0:2:3.01:47,3,0	1/1:6,19:25:33.11:540,33,0	0/1:15,0:15:31.95:188,0,32	1/1:5,10:15:30.01:388,30,0	1/1:3,5:8:12.04:197,12,0	1/1:6,3:9:6.02:98,6,0	./.	./.	0/0:4,0:4:8.93:0,9,114	1/1:4,9:13:24.08:393,24,0	1/1:5,11:16:33.09:495,33,0	1/1:9,12:21:18.06:294,18,0	0/1:6,5:11:31.11:222,0,31
chr10	68678225	.	CT	C	7243.10	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=4.080;DP=578;FS=3.301;HRun=9;HaplotypeScore=102.7179;InbreedingCoeff=0.9805;MQ=65.57;MQ0=18;MQRankSum=0.279;QD=18.62;ReadPosRankSum=4.522;VQSLOD=4.7608;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:88.73:0,89,959	1/1:0,7:7:21.01:192,21,0	0/0:46,1:21:18.92:0,19,327	0/0:47,1:18:32.21:0,32,263	0/0:18,1:19:17.66:0,18,449	1/1:4,16:20:47.27:425,47,0	1/1:4,17:21:33:302,33,0	1/1:6,22:28:63.02:576,63,0	1/1:2,10:12:24.44:219,24,0	1/1:5,20:25:63.02:575,63,0	1/1:2,11:13:33.01:299,33,0	1/1:7,13:20:42.12:354,42,0	1/1:4,8:12:16.96:143,17,0	1/1:5,10:14:26.42:240,26,0	1/1:3,13:16:27.60:267,28,0	1/1:6,20:25:49.95:445,50,0	1/1:8,17:23:34.20:420,34,0	1/1:6,11:17:10.44:225,10,0	1/1:3,14:17:38.98:345,39,0	1/1:1,13:14:26.99:243,27,0	1/1:7,17:24:43.83:388,44,0	1/1:2,11:13:26.70:246,27,0	0/0:18,0:18:44.95:0,45,486	0/0:21,0:21:35.13:0,35,380	1/1:1,8:9:18.01:165,18,0	1/1:0,20:20:60.02:545,60,0	1/1:3,21:24:50.80:464,51,0	1/1:4,7:10:18.01:165,18,0
chr10	68679408	.	TTA	T	2378.69	PASS	AB=0.769;AC=34;AF=0.630;AN=54;BaseQRankSum=4.985;DP=236;FS=21.622;HRun=0;HaplotypeScore=73.3086;InbreedingCoeff=0.6278;MQ=68.13;MQ0=3;MQRankSum=-2.300;QD=15.55;ReadPosRankSum=1.917;VQSLOD=1.8941;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:6:15.05:0,15,246	1/1:1,4:5:3.01:39,3,0	0/0:11,0:6:8.99:0,9,88	0/1:12,0:6:1.50:7,0,2	0/0:12,0:12:36.12:0,36,611	1/1:0,7:7:15.05:197,15,0	1/1:1,3:4:3.01:39,3,0	0/0:16,0:16:33.05:0,33,478	1/1:2,4:6:6.02:79,6,0	0/0:8,0:8:21.07:0,21,318	0/0:10,0:10:18.06:0,18,304	1/1:0,8:8:6.02:79,6,0	1/1:1,5:6:3.01:39,3,0	1/1:1,4:5:3:25,3,0	1/1:0,5:5:3.01:39,3,0	1/1:0,3:3:3.01:39,3,0	0/1:2,12:14:11.24:175,0,11	0/0:3,0:3:9.03:0,9,154	1/1:4,8:12:33.06:397,33,0	1/1:3,11:14:18.06:237,18,0	1/1:2,1:3:3.01:39,3,0	./.	0/0:9,0:9:18.06:0,18,304	0/0:5,0:5:12.04:0,12,206	1/1:0,13:13:14.08:164,14,0	1/1:2,19:21:57.17:734,57,0	1/1:0,11:11:6.02:79,6,0	1/1:0,4:4:12.04:157,12,0
chr10	68679431	.	TACACAC	T	1703.45	PASS	AB=0.650;AC=22;AF=0.550;AN=40;BaseQRankSum=4.156;DP=184;FS=6.975;HRun=0;HaplotypeScore=72.7248;InbreedingCoeff=0.3957;MQ=59.07;MQ0=6;MQRankSum=-2.876;QD=17.03;ReadPosRankSum=-1.390;VQSLOD=1.3100;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:3,0:3:6.02:0,6,200	./.	0/0:14,0:3:6.01:0,6,65	0/0:14,0:4:2.99:0,3,23	0/0:8,0:8:24.08:0,24,805	1/1:5,3:8:12.01:165,12,0	./.	0/0:3,0:7:2.61:0,3,29	1/1:2,2:4:2.99:24,3,0	0/0:1,0:4:0.20:0,0,4	1/1:2,0:6:0.94:2,1,0	./.	1/1:1,4:5:3.01:67,3,0	./.	./.	./.	0/1:5,8:13:50.31:122,0,50	1/1:2,0:3:0.47:1,0,0	0/1:8,7:13:35.35:456,0,35	1/1:4,5:9:3:25,3,0	./.	./.	0/0:4,0:4:12.04:0,12,403	0/0:3,0:3:9.03:0,9,309	1/1:3,8:11:6.01:75,6,0	1/1:3,9:12:30.10:654,30,0	1/1:4,6:10:3.01:67,3,0	1/1:1,3:4:9.03:181,9,0
chr10	68679460	.	ATGTGTGTGTGTG	A	668.70	PASS	AB=0.737;AC=11;AF=0.423;AN=26;BaseQRankSum=3.770;DP=142;FS=19.378;HRun=0;HaplotypeScore=71.9377;InbreedingCoeff=0.4389;MQ=30.86;MQ0=18;MQRankSum=-2.248;QD=9.83;ReadPosRankSum=2.177;VQSLOD=0.1137;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	0/0:7,0:7:21.07:0,21,894	./.	./.	0/0:6,0:12:29.12:0,29,417	./.	0/0:4,0:4:12.04:0,12,152	0/0:4,0:4:6.01:0,6,122	./.	./.	./.	./.	./.	0/1:6,4:10:0:0,0,0	1/1:1,0:3:6.02:74,6,0	0/1:29,3:12:99:312,0,130	./.	./.	./.	0/0:2,0:2:6.02:0,6,265	0/0:2,0:2:3.01:0,3,143	0/1:2,5:7:0:0,0,0	1/1:7,2:9:6.02:203,6,0	1/1:2,2:4:3.01:108,3,0	1/1:1,2:3:3.01:76,3,0
chr10	68682214	.	CTA	C	1657.01	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.475;DP=639;FS=0.566;HRun=0;HaplotypeScore=76.8960;InbreedingCoeff=0.9769;MQ=68.04;MQ0=1;MQRankSum=1.870;QD=29.59;ReadPosRankSum=0.651;VQSLOD=4.7140;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,102,1770	0/0:4,0:4:12.02:0,12,184	0/0:21,0:20:29.47:0,29,679	0/0:17,0:17:19.37:0,19,549	0/0:27,0:27:78.25:0,78,1336	0/0:24,0:24:63.19:0,63,1075	0/0:17,0:17:51.13:0,51,813	0/0:40,0:40:99:0,105,1750	0/0:25,0:25:72.25:0,72,1269	1/1:3,31:34:93.28:1243,93,0	1/1:2,20:21:39.13:535,39,0	0/0:20,0:20:57.20:0,57,1001	0/0:27,0:27:78.24:0,78,1320	0/0:20,0:20:54.18:0,54,947	0/0:33,0:33:96.27:0,96,1584	0/0:25,0:25:63.19:0,63,1061	0/0:20,0:20:57.17:0,57,979	0/0:19,0:19:51.16:0,51,860	0/0:20,0:20:51.17:0,51,892	0/0:28,0:28:78.25:0,78,1350	0/0:14,0:14:42.14:0,42,740	0/0:27,0:27:81.23:0,81,1351	0/0:23,0:23:69.24:0,69,1214	0/0:15,0:15:45.15:0,45,782	0/0:21,0:21:63.20:0,63,1077	0/0:30,1:30:49.09:0,49,1500	0/0:22,0:22:63.22:0,63,1111	0/0:7,0:7:17.99:0,18,319
chr10	68682701	.	C	CT	1064.80	PASS	AB=0.896;AC=10;AF=0.179;AN=56;BaseQRankSum=-0.209;DP=566;FS=2.336;HRun=12;HaplotypeScore=97.6819;InbreedingCoeff=0.5207;MQ=69.85;MQ0=6;MQRankSum=-3.046;QD=6.78;ReadPosRankSum=-2.408;VQSLOD=2.2636;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:20:19.61:0,20,208	0/0:8,0:8:16.73:0,17,115	0/0:34,0:11:16.49:0,16,89	0/1:36,0:16:6.56:7,0,95	0/0:23,0:26:50.37:0,50,332	0/0:25,0:25:55.64:0,56,465	0/0:11,0:11:20.52:0,21,139	1/1:24,11:38:50.53:455,51,0	0/0:17,1:19:11.65:0,12,258	0/1:13,5:19:4.24:124,0,4	1/1:7,14:22:31.83:430,32,0	0/0:20,0:20:29.59:0,30,216	0/0:13,0:13:26.20:0,26,181	0/0:18,0:17:23.82:0,24,175	0/1:12,1:14:2.39:2,0,148	0/0:18,0:18:23.76:0,24,175	0/0:16,1:19:2.65:0,3,171	1/1:11,5:17:23.63:190,24,0	0/0:21,2:25:16.52:0,17,265	0/0:20,0:21:20.33:0,20,238	0/0:18,1:19:7.02:0,7,212	0/0:13,0:13:17.67:0,18,123	0/0:15,1:16:10.47:0,10,235	0/0:17,1:18:6.58:0,7,211	0/0:21,0:21:35.67:0,36,258	0/0:24,1:25:12.12:0,12,237	0/0:18,0:19:34.80:0,35,246	0/1:10,1:11:11.44:11,0,91
chr10	68682717	.	GT	G	3664.95	PASS	AB=0.780;AC=35;AF=0.625;AN=56;BaseQRankSum=-1.314;DP=552;FS=2.636;HRun=13;HaplotypeScore=76.0213;InbreedingCoeff=0.5389;MQ=73.76;MQ0=7;MQRankSum=1.260;QD=9.64;ReadPosRankSum=2.061;VQSLOD=3.3248;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:55.85:0,56,507	1/1:1,6:7:8.93:66,9,0	0/1:42,0:17:11.75:12,0,46	0/0:37,1:16:5.14:0,5,38	0/1:23,4:27:18.01:18,0,426	1/1:12,13:27:0.80:308,1,0	0/1:2,13:15:28.51:145,0,29	0/0:25,0:29:31.96:0,32,195	1/1:5,13:18:41.70:306,42,0	0/0:9,0:17:38.29:0,38,235	0/0:14,0:23:47.39:0,47,315	0/1:4,8:13:29.07:130,0,29	1/1:2,12:14:26.84:197,27,0	1/1:4,14:17:35.77:263,36,0	0/0:12,0:12:2.94:0,3,153	1/1:3,14:17:35.73:257,36,0	1/1:5,12:17:11.80:160,12,0	0/0:14,0:16:28.53:0,29,161	1/1:11,8:21:22.74:156,23,0	1/1:5,16:22:34.23:223,34,0	1/1:11,6:17:25.59:179,26,0	1/1:3,13:16:5.50:188,6,0	0/0:16,0:16:21.02:0,21,199	0/1:17,2:19:4.75:5,0,270	1/1:5,13:18:29.80:219,30,0	1/1:7,19:26:58.57:417,59,0	1/1:3,14:17:35.79:263,36,0	1/1:0,8:8:20.88:153,21,0
chr10	68682858	.	A	AT	6801.93	PASS	AB=0.727;AC=41;AF=0.732;AN=56;BaseQRankSum=-7.388;DP=544;FS=1.287;HRun=12;HaplotypeScore=59.7822;InbreedingCoeff=0.4777;MQ=72.70;MQ0=2;MQRankSum=-1.013;QD=15.49;ReadPosRankSum=0.235;VQSLOD=5.6643;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:17,2:19:7.71:8,0,271	1/1:1,2:3:9.01:83,9,0	0/0:22,0:14:8.56:0,9,73	0/0:15,0:10:14.11:0,14,97	0/0:38,0:40:99:0,106,767	1/1:7,16:23:56.43:523,56,0	1/1:3,8:11:21.03:204,21,0	0/1:21,2:23:4.70:5,0,296	1/1:2,11:14:13.98:284,14,0	1/1:1,2:24:55.97:328,56,0	1/1:3,0:21:21.81:179,22,0	1/1:3,6:11:20.71:174,21,0	0/1:3,8:11:19.78:151,0,20	1/1:2,12:14:17.16:327,17,0	0/1:4,12:17:10.93:215,0,11	1/1:7,13:20:0.92:318,1,0	0/1:8,8:16:45.62:240,0,46	1/1:8,14:22:1.15:323,1,0	1/1:9,17:26:29.15:438,29,0	1/1:7,31:41:39.73:789,40,0	1/1:3,7:11:5.01:197,5,0	1/1:4,16:21:28.96:420,29,0	0/0:19,0:19:38.74:0,39,282	0/0:6,0:8:21.96:0,22,141	1/1:5,18:24:13.11:438,13,0	1/1:7,25:32:72.07:686,72,0	1/1:18,8:27:23:360,23,0	1/1:3,4:7:13.81:114,14,0
chr10	68683543	.	CT	C	4015.93	PASS	AB=0.778;AC=43;AF=0.768;AN=56;BaseQRankSum=4.675;DP=377;FS=1.893;HRun=9;HaplotypeScore=37.2127;InbreedingCoeff=0.5693;MQ=55.22;MQ0=25;MQRankSum=-0.227;QD=13.30;ReadPosRankSum=2.677;VQSLOD=2.7226;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:26:63.19:0,63,725	1/1:3,1:4:3:27,3,0	0/1:9,0:4:5.88:6,0,23	0/0:10,0:4:4.82:0,5,38	0/0:17,0:17:41.91:0,42,462	1/1:3,9:11:27.01:247,27,0	1/1:5,6:9:15:137,15,0	1/1:8,15:19:41.97:369,42,0	1/1:2,4:5:12.01:110,12,0	0/1:5,5:7:54.21:67,0,54	1/1:5,11:14:24.01:220,24,0	1/1:1,10:9:12:109,12,0	1/1:1,8:7:18:165,18,0	1/1:4,9:11:24.01:220,24,0	1/1:3,13:14:33.02:302,33,0	1/1:3,6:8:9:82,9,0	1/1:5,15:20:41.92:373,42,0	1/1:3,13:15:3.44:273,3,0	1/1:6,6:12:16.26:162,16,0	1/1:2,12:11:24.01:220,24,0	1/1:3,3:6:6:55,6,0	0/1:4,4:8:21.45:21,0,28	0/0:11,0:11:33.10:0,33,380	0/0:9,0:7:15.03:0,15,164	1/1:5,12:14:14.32:280,14,0	1/1:9,14:21:17.39:301,17,0	1/1:5,17:16:21.01:192,21,0	1/1:8,4:12:2.81:77,3,0
chr10	68685891	.	T	TA	970.19	PASS	AB=0.976;AC=7;AF=0.125;AN=56;BaseQRankSum=-5.371;DP=418;FS=1.368;HRun=9;HaplotypeScore=45.3143;InbreedingCoeff=0.5740;MQ=73.74;MQ0=0;MQRankSum=-0.327;QD=14.27;ReadPosRankSum=0.654;VQSLOD=3.2257;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:62.95:0,63,538	0/0:3,0:3:9:0,9,78	0/1:12,1:11:6.43:6,0,73	0/1:8,0:8:2.57:3,0,81	0/0:19,0:19:50.99:0,51,443	0/0:16,0:16:38.39:0,38,338	0/0:5,0:5:15:0,15,130	0/0:30,0:30:68.97:0,69,597	0/0:20,0:20:56.99:0,57,495	1/1:3,18:21:54.13:589,54,0	1/1:1,15:16:45.12:497,45,0	0/0:17,0:17:47.99:0,48,417	0/0:21,0:21:56.90:0,57,486	0/0:10,0:10:26.99:0,27,234	0/0:16,0:16:44.96:0,45,387	0/0:21,0:21:47.95:0,48,413	0/0:18,0:18:44.87:0,45,384	0/0:11,0:11:29.99:0,30,260	0/0:11,0:11:26.99:0,27,234	0/0:16,0:16:44.96:0,45,384	0/0:7,0:7:18:0,18,156	0/0:8,0:8:21:0,21,182	0/0:11,0:11:29.99:0,30,260	0/0:16,0:16:41.99:0,42,365	0/0:14,0:14:35.91:0,36,302	0/0:17,1:18:17.81:0,18,384	0/0:19,0:18:50.88:0,51,442	0/1:10,0:10:5.36:5,0,42
chr10	68686109	.	GT	G	1907.65	PASS	AB=0.588;AC=31;AF=0.554;AN=56;BaseQRankSum=0.968;DP=404;FS=1.046;HRun=15;HaplotypeScore=48.1244;InbreedingCoeff=0.5556;MQ=79.25;MQ0=5;MQRankSum=1.862;QD=8.05;ReadPosRankSum=5.041;VQSLOD=2.4420;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,1:23:28.35:0,28,319	0/1:2,5:7:14.50:46,0,14	0/0:21,0:17:14.84:0,15,109	0/0:16,0:11:2.40:0,2,26	0/0:12,1:13:1.71:0,2,131	0/1:4,9:14:3.78:98,0,4	1/1:1,10:11:17.69:115,18,0	0/0:12,0:29:58.78:0,59,323	1/1:2,9:12:16.77:102,17,0	0/0:11,1:12:11.98:0,12,101	0/0:15,0:14:23.90:0,24,201	1/1:3,9:12:20.63:134,21,0	1/1:4,8:12:17.68:115,18,0	1/1:0,3:3:8.87:58,9,0	1/1:3,16:20:28.63:179,29,0	0/1:2,7:9:5.64:95,0,6	0/1:8,17:25:84.34:135,0,84	0/0:7,0:17:32.60:0,33,166	1/1:12,14:29:20.86:260,21,0	1/1:1,6:8:17.22:105,17,0	1/1:4,5:8:11.81:77,12,0	1/1:2,2:4:2.02:17,2,0	0/0:9,0:9:18:0,18,158	0/0:10,0:10:14.98:0,15,128	1/1:0,6:6:14.77:95,15,0	1/1:9,6:14:11.58:77,12,0	1/1:3,14:19:39.50:242,39,0	0/1:8,12:20:61.44:157,0,61
chr10	68687268	.	CT	C	790.94	PASS	AB=1.000;AC=18;AF=0.321;AN=56;BaseQRankSum=4.255;DP=491;FS=36.391;HRun=10;HaplotypeScore=65.4390;InbreedingCoeff=0.2607;MQ=58.68;MQ0=15;MQRankSum=-2.523;QD=3.71;ReadPosRankSum=3.289;VQSLOD=-0.6118;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:54.15:0,54,596	0/0:8,0:8:0.37:0,0,48	0/0:49,0:7:4.81:0,5,47	0/1:39,0:14:1.64:2,0,95	0/0:22,0:22:66.15:0,66,712	0/0:25,0:25:4.11:0,4,75	0/0:7,0:7:1.16:0,1,4	0/0:33,0:33:2.78:0,3,129	0/1:9,0:9:7.96:8,0,10	1/1:2,21:23:62.84:521,63,0	1/1:3,15:18:38.65:302,39,0	0/1:7,0:7:10.53:11,0,13	0/1:7,0:7:1.82:2,0,18	1/1:10,0:10:6.28:18,6,0	1/1:9,0:8:6.39:17,6,0	0/1:15,0:15:3.76:4,0,37	0/1:21,0:20:8.40:8,0,49	0/1:19,0:19:0.31:0,0,19	0/0:16,0:16:7.86:0,8,80	0/0:25,0:25:16.97:0,17,184	0/0:3,0:3:5.98:0,6,48	0/0:4,0:4:6.29:0,6,51	0/0:7,0:7:15.03:0,15,157	0/0:10,0:10:15.02:0,15,156	0/0:26,0:26:0.24:0,0,129	0/0:24,0:23:12.30:0,12,62	0/1:22,0:22:10.56:27,0,11	1/1:14,0:14:7.50:27,7,0
chr10	68687278	.	TA	T	4797.28	PASS	AB=0.786;AC=40;AF=0.714;AN=56;BaseQRankSum=1.997;DP=494;FS=12.620;HRun=10;HaplotypeScore=51.7028;InbreedingCoeff=0.7954;MQ=56.85;MQ0=24;MQRankSum=-2.125;QD=15.38;ReadPosRankSum=2.847;VQSLOD=3.8401;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:57.07:0,57,608	0/1:2,6:8:0.62:135,0,1	0/0:55,0:6:3.48:0,3,31	0/0:40,0:14:16.85:0,17,119	0/0:25,0:25:69.14:0,69,729	1/1:5,21:26:44.98:388,45,0	1/1:0,7:7:15:129,15,0	1/1:7,22:29:65.88:556,66,0	1/1:1,8:9:17.99:156,18,0	0/0:29,0:29:39.23:0,39,249	0/1:19,0:19:5.23:5,0,89	1/1:1,7:8:15:129,15,0	1/1:1,6:7:14.96:124,15,0	1/1:0,8:8:18:155,18,0	1/1:1,9:9:15:130,15,0	1/1:2,12:14:23.98:208,24,0	1/1:3,14:16:29.99:260,30,0	1/1:5,16:21:35.96:306,36,0	1/1:6,11:14:30.04:256,30,0	1/1:8,17:24:47.86:401,48,0	1/1:3,0:3:2.92:17,3,0	1/1:2,3:5:8.95:71,9,0	0/0:5,0:5:12.03:0,12,131	0/0:7,0:7:14.99:0,15,150	1/1:6,15:21:26:334,26,0	1/1:4,19:21:53.93:455,54,0	1/1:1,20:22:43.90:358,44,0	1/1:5,8:11:26.90:225,27,0
chr10	68687806	.	CT	C	903.09	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.951;DP=610;FS=9.677;HRun=2;HaplotypeScore=58.2092;InbreedingCoeff=0.9917;MQ=84.97;MQ0=0;MQRankSum=-2.069;QD=34.73;ReadPosRankSum=-2.651;VQSLOD=2.3343;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:96.30:0,96,1396	0/0:8,0:8:24.08:0,24,360	0/0:20,0:20:59.18:0,59,781	0/0:22,0:22:62.35:0,62,861	0/0:28,0:28:81.27:0,81,1213	0/0:21,0:21:63.21:0,63,942	0/0:21,0:21:63.21:0,63,939	1/1:0,26:26:78.24:998,78,0	0/0:25,0:25:75.24:0,75,1098	0/0:33,0:33:99:0,99,1449	0/0:12,0:12:36.12:0,36,539	0/0:23,0:23:69.22:0,69,1013	0/0:25,0:25:75.25:0,75,1123	0/0:23,0:23:69.21:0,69,992	0/0:30,0:30:90.26:0,90,1271	0/0:22,0:22:66.22:0,66,989	0/0:27,0:27:78.25:0,78,1150	0/0:7,0:7:21.07:0,21,315	0/0:25,0:25:75.24:0,75,1096	0/0:30,0:30:90.28:0,90,1293	0/0:25,0:25:72.18:0,72,1017	0/0:21,0:21:60.19:0,60,881	0/0:16,0:16:42.10:0,42,587	0/0:12,0:12:36.12:0,36,540	0/0:22,0:22:63.20:0,63,925	0/0:20,0:20:60.17:0,60,875	0/0:25,0:25:72.22:0,72,1040	0/0:8,0:8:24.06:0,24,339
chr10	68688704	.	T	TTA	376.60	PASS	AC=2;AF=0.040;AN=50;BaseQRankSum=-4.890;DP=248;FS=2.628;HRun=0;HaplotypeScore=28.3398;InbreedingCoeff=0.3620;MQ=51.83;MQ0=27;MQRankSum=-3.136;QD=20.92;ReadPosRankSum=-2.280;VQSLOD=3.0432;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:23:47.99:0,48,714	0/0:6,0:6:15.05:0,15,228	./.	0/0:15,0:3:2.99:0,3,31	0/0:5,0:4:9.03:0,9,135	0/0:14,0:13:33.10:0,33,482	0/0:5,0:1:3.01:0,3,46	1/1:5,13:14:33.04:469,33,0	0/0:5,0:5:12.04:0,12,180	0/0:4,0:2:6.02:0,6,89	0/0:10,0:8:20.38:0,20,236	0/0:7,0:7:21.02:0,21,276	0/0:3,0:3:9.03:0,9,138	./.	0/0:4,0:4:12.03:0,12,159	0/0:4,0:4:12.03:0,12,160	0/0:33,0:32:57.06:0,57,800	0/0:28,0:27:69.20:0,69,993	0/0:16,0:10:26.79:0,27,316	0/0:1,0:1:3.01:0,3,46	0/0:4,0:2:6.02:0,6,88	0/0:2,0:2:2.97:0,3,20	0/0:1,0:1:2.97:0,3,20	./.	0/0:7,0:6:17.54:0,18,218	0/0:8,0:8:21.03:0,21,293	0/0:4,0:4:9.03:0,9,137	0/0:4,0:4:9.01:0,9,114
chr10	68689380	.	AT	A	11109.91	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=6.607;DP=534;FS=1.329;HRun=7;HaplotypeScore=55.9631;InbreedingCoeff=0.9843;MQ=75.24;MQ0=0;MQRankSum=-3.596;QD=26.77;ReadPosRankSum=3.278;VQSLOD=5.4917;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:75.23:0,75,930	1/1:0,8:8:24.05:245,24,0	0/0:13,0:13:30.09:0,30,353	0/0:23,1:23:10.78:0,11,564	0/0:22,0:22:57.18:0,57,717	1/1:0,13:13:33.07:337,33,0	1/1:1,13:14:39.09:398,39,0	1/1:6,22:28:66.11:660,66,0	1/1:2,20:22:54.12:551,54,0	1/1:1,33:34:99:1003,99,0	1/1:0,20:20:57.13:581,57,0	1/1:2,14:16:39.09:398,39,0	1/1:0,15:15:39.09:398,39,0	1/1:1,9:10:24.05:245,24,0	1/1:1,17:18:48.11:490,48,0	1/1:3,14:17:39.09:398,39,0	1/1:2,21:23:63.14:643,63,0	1/1:0,18:18:51.12:520,51,0	1/1:3,24:26:69.15:700,69,0	1/1:1,16:17:48.09:490,48,0	1/1:3,15:18:36.07:367,36,0	1/1:1,16:17:48.11:489,48,0	0/0:9,0:9:27.09:0,27,340	0/0:23,0:23:60.19:0,60,755	1/1:0,24:24:69.16:704,69,0	1/1:0,18:18:54.11:544,54,0	1/1:1,31:32:81.18:826,81,0	1/1:2,4:6:12.03:122,12,0
chr10	68689689	.	C	CGT	1630.99	PASS	AB=0.737;AC=31;AF=0.646;AN=48;BaseQRankSum=-2.460;DP=337;FS=0.953;HRun=0;HaplotypeScore=61.4264;InbreedingCoeff=0.2116;MQ=61.57;MQ0=10;MQRankSum=-0.570;QD=7.80;ReadPosRankSum=-2.735;VQSLOD=2.5478;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:22:11.50:0,12,100	0/1:4,1:6:7.19:39,0,7	./.	./.	0/0:15,0:17:11.82:0,12,99	0/1:8,4:12:23.69:80,0,24	0/1:11,3:15:74.44:74,0,81	./.	1/1:2,2:5:3.01:45,3,0	1/1:8,0:8:11.88:86,12,0	1/1:8,1:15:12.72:66,13,0	1/1:0,2:2:3.01:45,3,0	0/1:4,3:9:26.83:38,0,27	0/1:4,2:8:5.09:81,0,5	1/1:10,1:11:6.01:70,6,0	./.	0/1:15,9:27:52.48:241,0,52	0/0:10,0:21:32.80:0,33,158	1/1:9,3:11:9.03:132,9,0	1/1:7,2:11:12.02:142,12,0	0/1:19,5:26:35.81:36,0,39	1/1:2,3:6:9.03:134,9,0	0/0:5,0:5:3.01:0,3,33	0/0:14,0:14:12.03:0,12,131	1/1:2,4:6:6.02:90,6,0	1/1:10,0:8:8.96:90,9,0	1/1:6,3:8:8.62:132,9,0	1/1:8,0:10:18:171,18,0
chr10	68692428	.	T	TG	940.03	PASS	AB=0.889;AC=28;AF=0.519;AN=54;BaseQRankSum=0.220;DP=340;FS=18.746;HRun=11;HaplotypeScore=72.9264;InbreedingCoeff=0.2005;MQ=75.19;MQ0=1;MQRankSum=-2.683;QD=4.09;ReadPosRankSum=-2.028;VQSLOD=-0.4247;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:11.50:0,11,110	1/1:2,1:3:3.01:30,3,0	0/1:17,0:16:10.95:11,0,117	0/1:11,0:11:9.22:9,0,48	0/0:20,0:20:23.89:0,24,186	1/1:12,2:14:6.01:61,6,0	0/1:13,7:20:2.28:134,0,2	0/1:7,0:7:0:0,0,0	0/1:12,3:15:14.22:52,0,14	0/0:15,0:15:8.94:0,9,70	0/0:9,0:9:5.96:0,6,46	1/1:7,2:9:3.01:30,3,0	0/1:13,2:14:8.28:63,0,8	0/1:7,2:9:34.39:38,0,34	0/1:6,10:16:11.21:79,0,11	1/1:5,7:12:21:202,21,0	1/1:9,3:12:17.92:147,18,0	./.	0/0:12,0:12:2.97:0,3,23	0/0:10,1:11:2.97:0,3,23	0/1:12,0:11:0:0,0,0	1/1:9,2:11:5.97:50,6,0	0/0:8,0:8:5.97:0,6,46	0/0:12,0:12:17.89:0,18,139	0/1:16,0:16:13.63:14,0,17	1/1:7,1:8:2.88:15,3,0	1/1:14,2:16:11.97:104,12,0	1/1:2,5:7:6.01:61,6,0
chr10	68692439	.	GCT	G	168.54	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=2.736;DP=275;FS=4.671;HRun=0;HaplotypeScore=43.6074;InbreedingCoeff=0.7424;MQ=74.65;MQ0=1;MQRankSum=1.324;QD=15.32;ReadPosRankSum=-4.192;VQSLOD=1.9993;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:27.36:0,27,369	0/0:5,0:5:6.75:0,7,130	0/0:12,1:12:21.90:0,22,402	0/0:14,0:13:8.35:0,8,355	0/0:16,0:16:39.11:0,39,575	0/0:9,0:9:18.05:0,18,244	0/0:23,0:23:48.14:0,48,675	1/1:0,6:6:13.81:171,14,0	0/0:9,0:9:24.06:0,24,318	0/0:11,0:11:30.05:0,30,419	0/0:8,0:8:15.05:0,15,220	0/0:4,0:4:9.02:0,9,108	0/0:10,0:9:21.02:0,21,262	0/0:10,0:10:27.08:0,27,372	0/0:14,0:14:18.02:0,18,215	0/0:10,0:10:24.04:0,24,269	0/0:10,0:10:18.74:0,19,267	1/1:4,0:5:9:106,9,0	0/0:3,0:3:9.03:0,9,145	0/0:9,0:9:12.03:0,12,190	0/0:10,0:9:24.08:0,24,384	0/0:6,0:6:15.04:0,15,190	0/0:5,0:5:15.05:0,15,215	0/0:11,0:11:33.11:0,33,531	0/0:12,0:12:10.50:0,11,408	0/0:11,0:11:26.40:0,26,404	0/0:10,0:10:13.68:0,14,188	0/0:6,0:6:9.02:0,9,104
chr10	68697329	.	TTTG	T	722.39	PASS	AB=0.919;AC=5;AF=0.089;AN=56;BaseQRankSum=6.607;DP=518;FS=66.340;HRun=0;HaplotypeScore=99.8906;InbreedingCoeff=0.3134;MQ=47.40;MQ0=30;MQRankSum=-4.984;QD=8.40;ReadPosRankSum=-0.957;VQSLOD=-0.1556;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:23:21.99:0,22,697	0/0:11,0:10:19.55:0,20,364	0/0:22,0:6:17.91:0,18,189	0/1:29,0:4:8.23:8,0,86	0/0:21,0:21:34.43:0,34,874	0/0:21,0:20:14.93:0,15,787	0/0:15,0:15:17.54:0,18,672	0/1:21,10:29:10.24:579,0,10	0/0:17,0:17:28.46:0,28,674	0/0:18,0:16:34.46:0,34,791	0/1:15,0:15:15.50:15,0,508	0/0:18,0:17:20.74:0,21,656	0/0:18,0:18:14.71:0,15,308	0/0:15,0:15:10.53:0,11,529	0/0:11,0:11:23.95:0,24,363	0/0:21,0:19:19.11:0,19,695	0/0:23,0:21:35.89:0,36,834	1/1:9,2:9:15.69:236,16,0	0/0:18,0:16:35.18:0,35,599	0/0:23,0:20:30.52:0,31,640	0/0:10,0:7:13.61:0,14,290	0/0:15,0:15:26.78:0,27,526	0/0:13,0:12:27.64:0,28,478	0/0:13,0:13:26.57:0,27,503	0/0:15,0:15:39.06:0,39,736	0/0:25,0:23:3.19:0,3,689	0/0:22,0:22:12.04:0,12,313	0/0:19,0:13:39.13:0,39,807
chr10	68697332	.	G	GT	640.42	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.254;DP=514;FS=56.603;HRun=3;HaplotypeScore=83.6728;InbreedingCoeff=0.7050;MQ=47.00;MQ0=28;MQRankSum=-7.655;QD=15.62;ReadPosRankSum=1.989;VQSLOD=0.1201;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:22:19.42:0,19,365	0/0:11,0:10:6.55:0,7,204	0/0:23,0:8:20.50:0,21,171	0/0:27,0:3:5.40:0,5,70	0/0:19,0:19:45.95:0,46,518	0/0:21,0:20:16.45:0,16,454	0/0:15,0:15:33.03:0,33,403	1/1:24,7:29:44.30:562,44,0	0/0:16,0:16:21.42:0,21,354	0/0:19,0:17:46.91:0,47,484	0/0:16,0:16:20.12:0,20,349	0/0:19,0:18:2.97:0,3,330	0/0:20,0:20:18.20:0,18,216	0/0:14,0:14:8.74:0,9,267	0/0:12,0:12:1.43:0,1,179	0/0:18,0:16:27.85:0,28,418	0/0:22,0:20:34.95:0,35,478	1/1:7,3:9:18.48:197,18,0	0/0:17,0:15:28.37:0,28,323	0/0:23,0:20:23.70:0,24,419	0/0:11,0:8:18:0,18,215	0/0:16,0:16:21.28:0,21,291	0/0:12,0:12:26.83:0,27,284	0/0:14,0:14:17.56:0,18,292	0/0:14,0:14:39.12:0,39,461	0/0:23,0:21:17.92:0,18,413	0/0:24,0:24:19.49:0,19,211	0/0:19,0:13:36.11:0,36,427
chr10	68700798	.	TACACACACACACACACACAC	T	1545.26	PASS	AB=0.957;AC=5;AF=0.089;AN=56;BaseQRankSum=4.579;DP=548;FS=15.297;HRun=0;HaplotypeScore=248.5578;InbreedingCoeff=0.4972;MQ=66.79;MQ0=10;MQRankSum=-2.710;QD=22.72;ReadPosRankSum=0.239;VQSLOD=0.8595;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:26:28.72:0,29,2007	0/0:7,0:7:8.92:0,9,303	0/0:31,0:21:5.99:0,6,65	0/0:39,0:26:12.04:0,12,168	0/0:18,0:19:24.08:0,24,2132	0/0:16,0:15:9.03:0,9,759	0/0:16,0:16:21.05:0,21,1146	0/0:29,0:29:39.11:0,39,1409	0/0:9,0:9:12.04:0,12,761	1/1:17,14:31:30.05:1160,30,0	1/1:9,6:15:11.39:391,11,0	0/0:27,0:26:26.40:0,26,1386	0/0:18,0:17:27.09:0,27,1322	0/0:18,0:18:15.05:0,15,1138	0/0:14,0:14:6.02:0,6,304	0/0:24,0:23:21.06:0,21,1301	0/0:24,0:23:33.49:0,33,1703	0/0:9,0:9:17.09:0,17,1095	0/0:31,0:31:46.52:0,47,2393	0/0:13,0:10:15.05:0,15,1112	0/0:22,0:22:4.36:0,4,20	0/0:13,0:13:3.01:0,3,240	0/0:10,0:10:12.04:0,12,881	0/0:23,0:24:36.08:0,36,2762	0/0:22,0:22:8.92:0,9,383	0/1:21,1:21:99:118,0,2642	0/0:15,0:14:15.04:0,15,877	0/0:2,0:2:3.01:0,3,82
chr10	68700846	.	CAA	C	35.21	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.563;DP=592;FS=0.000;HRun=3;HaplotypeScore=118.7167;InbreedingCoeff=0.8922;MQ=61.91;MQ0=6;MQRankSum=2.398;QD=4.40;ReadPosRankSum=0.177;VQSLOD=-0.4022;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:31:62.87:0,63,634	0/0:10,0:10:19.14:0,19,147	0/0:18,0:14:21.35:0,21,264	0/0:16,0:10:20.03:0,20,175	0/0:29,0:28:61.86:0,62,654	0/0:14,0:13:18.61:0,19,164	0/0:31,0:31:77.91:0,78,701	0/0:25,0:24:63.01:0,63,578	0/0:17,0:16:32.88:0,33,321	0/0:27,0:26:58.24:0,58,446	0/0:14,0:14:39.59:0,40,286	0/0:35,0:34:76.04:0,76,692	0/0:20,0:20:44.76:0,45,403	0/0:22,0:22:38.83:0,39,335	0/0:22,0:22:38.84:0,39,320	0/0:28,0:27:59.82:0,60,542	0/0:30,0:29:62.71:0,63,543	1/1:2,6:8:8.94:118,9,0	0/0:27,0:27:68.79:0,69,674	0/0:19,0:16:38.81:0,39,338	0/0:28,0:27:45.77:0,46,377	0/0:16,0:16:37.19:0,37,336	0/0:14,0:14:28.17:0,28,228	0/0:20,0:19:39.19:0,39,542	0/0:23,0:23:52:0,52,456	0/0:26,0:25:50.23:0,50,530	0/0:15,0:15:17.85:0,18,164	0/0:6,0:6:15:0,15,170
chr10	68701028	.	C	CCT	14901.39	PASS	AB=0.648;AC=35;AF=0.625;AN=56;BaseQRankSum=-0.689;DP=552;FS=1.962;HRun=0;HaplotypeScore=97.1547;InbreedingCoeff=0.8980;MQ=68.06;MQ0=1;MQRankSum=-7.321;QD=43.70;ReadPosRankSum=2.634;VQSLOD=6.4554;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:81.26:0,81,1171	1/1:2,8:10:24.02:414,24,0	0/0:17,0:17:47.94:0,48,644	0/0:26,0:23:57.13:0,57,758	0/0:12,0:12:33.08:0,33,446	1/1:2,10:12:33.11:609,33,0	1/1:8,8:16:34.95:594,35,0	0/0:28,0:28:81.27:0,81,1191	1/1:4,19:23:63.20:1146,63,0	0/0:28,0:28:81.27:0,81,1191	0/0:14,0:14:39.11:0,39,538	1/1:5,18:23:66.23:1221,66,0	1/1:7,10:18:45.15:825,45,0	1/1:3,16:19:36.12:669,36,0	1/1:4,18:22:57.20:1051,57,0	1/1:0,16:16:45.15:841,45,0	1/1:13,20:32:78.22:1360,78,0	0/0:16,0:16:42.12:0,42,594	1/1:8,11:18:54.15:931,54,0	1/1:3,14:17:39.13:718,39,0	1/1:2,26:27:38.96:721,39,0	1/1:3,7:10:21.07:373,21,0	0/0:18,0:18:48.16:0,48,704	0/0:22,0:22:60.19:0,60,863	1/1:3,12:15:39.13:707,39,0	0/1:16,19:35:74.34:1503,0,74	1/1:8,16:24:66.11:1181,66,0	1/1:1,0:1:3.01:39,3,0
chr10	68701055	.	A	ATT	3945.91	PASS	AB=0.571;AC=37;AF=0.661;AN=56;BaseQRankSum=9.242;DP=538;FS=24.197;HRun=9;HaplotypeScore=133.4003;InbreedingCoeff=0.7758;MQ=56.87;MQ0=1;MQRankSum=-5.402;QD=10.25;ReadPosRankSum=0.044;VQSLOD=-0.0628;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:62.80:0,63,638	1/1:2,0:10:14.85:51,15,0	0/0:9,0:8:11.75:0,12,107	0/0:15,0:15:20.98:0,21,205	0/0:12,0:12:24.02:0,24,255	0/1:4,0:14:1.09:80,0,1	1/1:4,0:14:14.40:57,14,0	0/0:28,0:28:60.13:0,60,638	1/1:4,0:26:52.91:190,53,0	1/1:7,27:34:81.23:1196,81,0	1/1:5,13:20:44.59:603,45,0	1/1:7,0:22:34.75:122,35,0	1/1:1,0:14:32.44:111,32,0	1/1:4,0:13:31.19:138,31,0	1/1:7,0:23:37.31:128,37,0	1/1:3,0:15:26.53:92,27,0	1/1:4,0:32:54.71:190,55,0	0/0:12,0:12:30.07:0,30,319	1/1:7,0:21:43.50:165,44,0	0/1:5,0:18:30.92:59,0,31	1/1:9,1:17:23.10:118,23,0	1/1:3,0:10:17.47:60,17,0	0/0:20,0:20:54.11:0,54,567	0/0:27,0:27:68.83:0,69,734	1/1:7,0:26:43.40:191,43,0	1/1:12,2:29:17.89:227,18,0	0/1:3,0:17:25.65:73,0,26	1/1:2,1:6:13.34:95,13,0
chr10	68703404	.	TA	T	2102.06	PASS	AB=0.735;AC=35;AF=0.625;AN=56;BaseQRankSum=-0.329;DP=440;FS=3.530;HRun=16;HaplotypeScore=77.1842;InbreedingCoeff=0.3244;MQ=57.24;MQ0=19;MQRankSum=2.182;QD=6.76;ReadPosRankSum=2.391;VQSLOD=3.0792;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:18,1:17:9.83:0,10,180	1/1:5,1:7:10.81:59,11,0	0/0:28,0:8:14.58:0,15,101	0/0:39,2:13:5.38:0,5,38	0/0:24,1:27:40.73:0,41,378	1/1:5,8:14:1.35:108,1,0	1/1:8,3:11:17.62:107,18,0	1/1:21,0:33:33.25:97,33,0	0/1:2,6:9:5.44:76,0,5	1/1:5,8:14:11.11:133,11,0	1/1:16,6:23:16.55:179,17,0	1/1:9,3:11:27.65:161,28,0	1/1:7,2:9:11.11:67,11,0	0/1:6,3:8:7.79:71,0,8	1/1:8,3:12:17.14:94,17,0	1/1:4,2:6:16.25:93,16,0	0/1:9,14:20:4.61:87,0,5	0/1:10,4:15:0.57:93,0,1	1/1:7,11:16:26.55:178,27,0	0/1:8,15:23:2.46:150,0,2	1/1:1,3:5:5.40:24,5,0	0/1:3,0:2:9.50:10,0,33	0/0:7,0:6:11.97:0,12,98	0/0:5,0:5:3:0,3,25	0/1:8,4:12:4.60:63,0,5	0/1:17,4:21:1.91:196,0,2	0/1:13,7:20:16.59:157,0,17	1/1:5,4:9:12:72,12,0
chr10	68703470	.	AAAC	A	371.18	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=-0.817;DP=437;FS=0.948;HRun=0;HaplotypeScore=112.1974;InbreedingCoeff=0.5655;MQ=66.00;MQ0=0;MQRankSum=0.274;QD=9.77;ReadPosRankSum=2.532;VQSLOD=3.2683;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:39.41:0,39,513	0/0:7,0:7:15.02:0,15,175	0/1:21,0:13:6.93:7,0,186	0/0:21,0:16:24.36:0,24,222	0/0:22,0:22:54.92:0,55,798	0/0:12,0:12:31.52:0,32,288	0/0:5,0:5:11.90:0,12,109	0/0:22,0:22:42.52:0,43,292	0/0:11,0:11:32.81:0,33,341	0/0:19,0:19:47.19:0,47,573	0/0:19,0:19:48.01:0,48,619	0/0:15,0:15:32.59:0,33,306	0/0:6,0:6:2.10:0,2,64	0/0:9,0:9:26.82:0,27,199	0/0:12,0:12:21:0,21,222	0/0:12,0:12:19.52:0,20,167	0/0:33,0:33:75.52:0,76,787	1/1:9,8:17:41.84:464,42,0	0/0:22,0:22:64.54:0,65,591	0/0:23,0:23:63.77:0,64,748	0/0:8,0:8:23.94:0,24,262	0/0:8,0:8:22.72:0,23,200	0/0:13,0:13:33.05:0,33,457	0/0:7,0:7:17.01:0,17,212	0/0:22,0:22:62.84:0,63,615	0/0:28,0:27:63.37:0,63,746	0/0:18,0:18:43.30:0,43,475	0/0:9,0:9:16.88:0,17,125
chr10	68704620	.	A	ATC	2832.01	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-10.212;DP=697;FS=1.707;HRun=0;HaplotypeScore=79.5872;InbreedingCoeff=0.9994;MQ=89.53;MQ0=2;MQRankSum=-0.921;QD=44.25;ReadPosRankSum=-2.997;VQSLOD=4.2320;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,132,1923	0/0:9,0:9:27.09:0,27,397	0/0:26,0:26:72.22:0,72,1004	0/0:27,0:27:72.21:0,72,993	0/0:25,0:25:72.24:0,72,1057	0/0:22,0:22:63.21:0,63,927	0/0:34,0:34:96.25:0,96,1349	1/1:6,35:41:99:1943,111,0	0/0:27,0:27:72.22:0,72,1021	0/0:23,0:23:66.20:0,66,921	0/0:26,0:26:78.25:0,78,1128	0/0:18,0:18:51.17:0,51,751	0/0:20,0:20:60.19:0,60,865	0/0:16,0:16:45.14:0,45,642	0/0:25,0:25:72.24:0,72,1060	0/0:25,0:25:69.23:0,69,1013	0/0:25,0:25:75.20:0,75,1057	1/1:0,23:21:54.19:1011,54,0	0/0:13,0:13:36.09:0,36,507	0/0:25,0:25:75.24:0,75,1084	0/0:37,0:37:99:0,108,1523	0/0:30,0:30:87.29:0,87,1281	0/0:22,0:22:66.20:0,66,934	0/0:24,0:24:69.21:0,69,994	0/0:18,0:17:51.17:0,51,751	0/0:31,0:31:87.27:0,87,1242	0/0:23,0:23:63.21:0,63,927	0/0:18,0:18:51.14:0,51,711
chr10	68706207	.	CT	C	1101.20	PASS	AB=0.961;AC=30;AF=0.536;AN=56;BaseQRankSum=6.959;DP=543;FS=6.135;HRun=15;HaplotypeScore=75.8182;InbreedingCoeff=0.0886;MQ=61.72;MQ0=6;MQRankSum=0.927;QD=2.88;ReadPosRankSum=2.870;VQSLOD=-0.1202;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,1:35:38.92:0,39,326	0/1:8,0:7:15.57:23,0,16	0/1:25,0:9:20.77:21,0,46	0/0:18,0:8:5.77:0,6,26	0/0:21,2:25:46.22:0,46,379	1/1:24,0:24:6.83:101,7,0	1/1:10,0:10:10.78:48,11,0	0/1:16,11:27:5.06:175,0,5	1/1:14,0:14:8.65:39,9,0	0/0:25,1:26:20.90:0,21,253	0/0:21,0:23:19.08:0,19,319	1/1:22,1:22:28.97:141,29,0	1/1:19,0:19:0.62:48,1,0	0/1:11,0:11:9.94:27,0,10	0/1:26,0:26:12.79:117,0,13	1/1:17,0:17:18.76:82,19,0	1/1:22,0:22:30.51:145,31,0	0/0:9,0:16:22.85:0,23,119	0/1:21,0:20:26.46:26,0,73	0/1:29,0:29:43.14:43,0,123	1/1:10,0:10:5.32:23,5,0	0/1:14,0:14:4.59:41,0,5	0/1:4,1:5:13.28:13,0,17	0/0:15,0:15:17.86:0,18,158	0/1:22,0:21:46.33:46,0,66	1/1:22,0:21:6.22:84,6,0	0/1:19,0:19:23.63:26,0,24	0/1:13,0:12:13.04:13,0,99
chr10	68706221	.	TTA	T	1662	PASS	AB=0.973;AC=31;AF=0.554;AN=56;BaseQRankSum=7.101;DP=528;FS=12.841;HRun=0;HaplotypeScore=69.2833;InbreedingCoeff=0.2757;MQ=56.01;MQ0=16;MQRankSum=-1.546;QD=4.71;ReadPosRankSum=4.432;VQSLOD=0.7788;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:36:63.11:0,63,857	1/1:10,0:9:3.75:66,4,0	0/0:34,0:9:15.71:0,16,174	0/0:23,0:4:2.92:0,3,17	0/0:23,0:23:54.61:0,55,754	1/1:20,1:20:7.27:108,7,0	1/1:8,0:8:13.21:56,13,0	0/0:25,0:21:36.33:0,36,402	1/1:7,1:8:10.57:66,11,0	0/1:26,0:26:99:103,0,155	0/1:21,0:21:16.68:17,0,159	1/1:25,0:24:28.21:128,28,0	0/1:16,0:16:10.86:32,0,11	0/1:10,0:10:10.19:31,0,10	1/1:28,0:28:25.50:193,26,0	1/1:12,2:14:23.92:123,24,0	1/1:23,0:22:27.63:101,28,0	0/0:15,0:13:24.08:0,24,307	0/1:18,1:17:61.86:168,0,62	0/1:25,0:25:44.26:44,0,105	1/1:5,0:5:5.19:20,5,0	1/1:11,0:11:26.20:118,26,0	0/0:6,0:6:14.85:0,15,137	0/0:12,0:12:21.06:0,21,331	0/1:19,2:20:37.60:132,0,38	1/1:25,1:24:22.73:204,23,0	0/1:18,1:19:27.55:38,0,28	0/1:16,1:15:36.61:108,0,37
chr10	68706222	.	TA	T	5418.73	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=2.919;DP=520;FS=3.053;HRun=3;HaplotypeScore=50.7985;InbreedingCoeff=0.8768;MQ=56.00;MQ0=17;MQRankSum=-3.521;QD=15.66;ReadPosRankSum=1.210;VQSLOD=4.4664;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:57.07:0,57,599	1/1:5,6:10:23.54:198,24,0	0/0:34,1:9:2.74:0,3,101	0/0:23,0:4:0.47:0,0,1	0/0:23,0:23:47.64:0,48,509	1/1:3,16:18:33.05:377,33,0	1/1:0,8:8:14.98:162,15,0	0/0:25,0:21:46.19:0,46,314	1/1:1,7:8:11.97:125,12,0	1/1:24,2:26:44.82:321,45,0	1/1:19,2:21:19.14:144,19,0	1/1:2,22:23:32.99:372,33,0	1/1:2,13:15:23.83:244,24,0	1/1:3,6:9:11.93:116,12,0	1/1:10,18:28:68.78:669,69,0	1/1:3,11:14:26.95:288,27,0	1/1:0,23:22:33.10:391,33,0	0/0:15,0:13:23.96:0,24,204	1/1:14,4:16:5.43:228,5,0	1/1:7,17:24:19.69:285,20,0	1/1:0,5:5:6.02:73,6,0	1/1:5,6:11:27.75:274,28,0	0/0:6,0:6:13.67:0,14,96	0/0:12,0:12:20.92:0,21,243	1/1:7,13:19:31.28:314,31,0	1/1:4,22:24:47.54:472,48,0	1/1:3,16:19:14.87:162,15,0	1/1:15,2:15:23.72:205,24,0
chr10	68706225	.	AG	A	1286.45	PASS	AB=0.994;AC=30;AF=0.556;AN=54;BaseQRankSum=6.296;DP=507;FS=7.759;HRun=1;HaplotypeScore=63.8292;InbreedingCoeff=0.3865;MQ=54.42;MQ0=27;MQRankSum=1.985;QD=4.15;ReadPosRankSum=3.052;VQSLOD=0.3409;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,1:34:56.84:0,57,881	0/1:11,0:10:23.97:42,0,24	0/0:35,0:8:14.60:0,15,156	./.	0/0:21,1:22:47.65:0,48,698	1/1:19,0:18:23.77:135,24,0	0/1:10,0:9:6.10:38,0,6	0/0:27,0:21:60.09:0,60,744	1/1:8,0:8:4.02:42,4,0	0/1:19,1:20:0.52:1,0,66	0/0:21,0:21:12.24:0,12,192	1/1:23,1:23:31.81:194,32,0	1/1:13,1:14:20.29:132,20,0	1/1:7,0:7:9.45:75,9,0	1/1:28,0:28:9.82:170,10,0	1/1:14,0:14:22.54:115,23,0	1/1:23,0:22:30.55:148,31,0	0/0:14,0:12:24.08:0,24,345	0/1:17,0:15:17.89:18,0,95	0/1:19,0:19:24.23:65,0,24	1/1:6,0:6:5.36:23,5,0	0/1:12,0:11:0.48:62,0,0	0/0:7,0:7:17.97:0,18,200	0/0:13,0:13:20.94:0,21,332	0/1:19,0:18:34.69:51,0,35	1/1:25,0:23:0.08:73,0,0	1/1:17,0:17:10.65:72,11,0	0/1:16,0:14:17.75:18,0,73
chr10	68706652	.	C	CA	971.03	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-8.502;DP=805;FS=0.757;HRun=2;HaplotypeScore=74.4686;InbreedingCoeff=0.9912;MQ=62.23;MQ0=6;MQRankSum=0.552;QD=35.96;ReadPosRankSum=-3.373;VQSLOD=2.7579;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:57:99:0,159,1971	0/0:6,0:6:18.04:0,18,211	0/0:30,0:16:42.11:0,42,506	0/0:25,0:12:32.98:0,33,391	0/0:21,0:21:54.17:0,54,669	0/0:28,0:28:75.23:0,75,930	0/0:30,0:30:81.24:0,81,992	1/1:1,25:27:70.63:1066,71,0	0/0:41,0:41:99:0,123,1498	0/0:26,0:26:72.22:0,72,881	0/0:22,0:22:45.12:0,45,533	0/0:25,0:25:75.22:0,75,917	0/0:18,0:18:54.15:0,54,655	0/0:20,0:20:51.16:0,51,632	0/0:34,0:34:99:0,99,1227	0/0:32,0:32:93.27:0,93,1128	0/0:41,0:41:99:0,114,1412	0/0:37,0:37:99:0,104,1232	0/0:23,0:22:63.20:0,63,781	0/0:32,0:32:84.26:0,84,1040	0/0:53,0:53:99:0,147,1771	0/0:32,0:31:78.23:0,78,954	0/0:17,0:17:42.13:0,42,514	0/0:39,0:39:99:0,117,1423	0/0:18,0:18:48.15:0,48,592	0/0:25,0:25:66.20:0,66,806	0/0:33,0:33:96.29:0,96,1175	0/0:11,0:11:30.07:0,30,358
chr10	68707176	.	CAA	C	2178.85	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.113;DP=775;FS=0.000;HRun=3;HaplotypeScore=89.4008;InbreedingCoeff=0.9999;MQ=65.35;MQ0=0;MQRankSum=-0.433;QD=38.91;ReadPosRankSum=-0.285;VQSLOD=3.1012;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,165,3113	0/0:12,0:12:36.12:0,36,696	0/0:31,0:31:89.52:0,90,1650	0/0:33,0:33:89.72:0,90,1585	0/0:25,0:25:75.26:0,75,1449	0/0:20,0:20:57.18:0,57,1043	0/0:21,0:21:63.21:0,63,1186	1/1:0,24:24:72.23:1080,72,0	0/0:32,0:32:93.32:0,93,1776	0/0:33,0:33:96.33:0,96,1853	0/0:20,0:20:60.21:0,60,1159	0/0:22,0:22:66.23:0,66,1274	0/0:33,0:33:99:0,99,1874	0/0:19,0:19:57.20:0,57,1090	0/0:29,0:29:84.29:0,84,1616	0/0:29,0:29:84.29:0,84,1623	0/0:20,0:19:60.21:0,60,1159	1/1:2,30:32:64.30:1220,64,0	0/0:35,0:33:99:0,102,1961	0/0:34,0:34:96.33:0,96,1831	0/0:24,0:24:72.23:0,72,1358	0/0:32,0:32:96.32:0,96,1818	0/0:21,0:21:63.22:0,63,1217	0/0:41,0:41:99:0,123,2359	0/0:17,0:17:51.17:0,51,956	0/0:26,0:26:78.26:0,78,1472	0/0:42,0:42:99:0,126,2434	0/0:13,0:13:39.13:0,39,753
chr10	68709681	.	G	GA	1710.87	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-7.522;DP=533;FS=0.494;HRun=9;HaplotypeScore=57.4720;InbreedingCoeff=0.9897;MQ=76.75;MQ0=2;MQRankSum=1.568;QD=23.12;ReadPosRankSum=-2.279;VQSLOD=3.5912;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,111,963	0/0:7,0:7:21:0,21,182	0/0:39,1:28:17.19:0,17,307	0/0:29,0:21:17.02:0,17,212	0/0:18,0:18:41.99:0,42,364	0/0:16,0:16:38.97:0,39,339	0/0:20,0:20:41.97:0,42,365	1/1:5,24:29:63.31:663,63,0	0/0:23,0:23:59.97:0,60,521	1/1:5,11:16:33.09:365,33,0	1/1:0,7:7:21.06:232,21,0	0/0:13,0:13:35.99:0,36,313	0/0:22,1:23:26.79:0,27,461	0/0:16,0:16:41.96:0,42,359	0/0:13,0:13:32.99:0,33,286	0/0:18,0:18:50.99:0,51,443	0/0:30,0:30:83.93:0,84,719	1/1:1,20:22:56.99:611,57,0	0/0:14,0:14:35.99:0,36,312	0/0:8,0:8:23.98:0,24,205	0/0:15,0:15:41.98:0,42,364	0/0:8,0:8:21:0,21,182	0/0:11,0:11:29.97:0,30,255	0/0:25,0:25:56.98:0,57,495	0/0:16,0:17:38.95:0,39,334	0/0:21,0:21:59.98:0,60,520	0/0:13,0:13:35.99:0,36,312	0/0:19,0:18:56.99:0,57,495
chr10	68710383	.	GT	G	535.56	PASS	AB=0.851;AC=11;AF=0.196;AN=56;BaseQRankSum=6.214;DP=397;FS=1.213;HRun=13;HaplotypeScore=42.0059;InbreedingCoeff=0.1644;MQ=77.02;MQ0=1;MQRankSum=0.400;QD=3.83;ReadPosRankSum=1.756;VQSLOD=-0.6150;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,3:26:11.42:0,11,408	0/0:10,1:11:2.13:0,2,182	0/0:24,0:14:11.97:0,12,101	0/0:15,0:8:3.20:0,3,37	0/0:20,1:22:56.70:0,57,512	0/1:17,3:20:1.68:2,0,303	0/0:6,0:6:15.02:0,15,146	0/0:18,1:19:5.11:0,5,202	0/1:7,2:9:0.88:1,0,154	1/1:5,16:21:47.71:350,48,0	1/1:3,11:14:32.78:241,33,0	0/0:8,0:8:24.04:0,24,231	0/0:4,0:4:9.01:0,9,87	0/0:7,1:8:2.13:0,2,182	0/0:17,0:17:35.79:0,36,327	0/0:12,0:12:36.02:0,36,334	0/1:27,4:33:7.17:7,0,518	0/0:17,2:19:17.10:0,17,312	0/0:16,0:17:41.73:0,42,375	0/1:7,3:10:38.18:38,0,122	0/0:8,0:8:15:0,15,139	0/0:5,0:5:9.01:0,9,88	0/1:9,2:11:19.79:20,0,145	0/0:3,0:3:6.01:0,6,58	0/0:20,0:20:25.90:0,26,333	0/1:7,1:8:9.89:10,0,76	0/0:13,0:12:39.06:0,39,379	0/1:12,2:14:11.09:11,0,211
chr10	68718622	.	GC	G	2071.26	PASS	AB=1.000;AC=38;AF=0.679;AN=56;BaseQRankSum=6.605;DP=414;FS=29.819;HRun=11;HaplotypeScore=68.9733;InbreedingCoeff=0.5765;MQ=76.86;MQ0=1;MQRankSum=-0.552;QD=6.06;ReadPosRankSum=5.582;VQSLOD=-0.0866;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:28:0.57:1,0,334	0/0:1,0:1:0:0,0,0	0/0:22,0:10:2.07:0,2,19	0/0:16,0:11:16.76:0,17,112	0/0:11,1:13:23.84:0,24,196	1/1:22,0:22:44.92:213,45,0	1/1:26,0:26:41.75:200,42,0	0/1:8,0:8:0:0,0,0	1/1:15,0:15:33.87:162,34,0	1/1:4,6:11:16.86:112,17,0	1/1:1,6:7:5.99:49,6,0	0/1:20,0:20:12.28:69,0,12	1/1:13,0:13:17.04:82,17,0	1/1:9,0:9:11.26:54,11,0	0/1:13,0:13:2.20:73,0,2	1/1:13,0:12:4.23:98,4,0	1/1:32,0:32:63.53:307,64,0	1/1:22,0:22:38.64:184,39,0	1/1:17,0:17:27.49:135,27,0	1/1:7,0:7:12.79:53,13,0	1/1:26,1:27:2.61:69,3,0	1/1:13,0:13:16.94:82,17,0	0/0:6,0:6:9.01:0,9,89	0/0:10,1:11:5.40:0,5,230	1/1:12,0:12:19.68:97,20,0	1/1:15,0:15:18.81:118,19,0	1/1:12,0:12:16.09:73,16,0	0/0:3,0:3:0:0,0,0
chr10	68718632	.	CCG	C	6402.11	PASS	AB=0.768;AC=36;AF=0.643;AN=56;BaseQRankSum=5.325;DP=481;FS=0.000;HRun=0;HaplotypeScore=63.7611;InbreedingCoeff=0.6205;MQ=73.93;MQ0=2;MQRankSum=-0.683;QD=18.77;ReadPosRankSum=11.087;VQSLOD=3.6064;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:60.29:0,60,813	0/1:3,0:3:13.85:18,0,14	0/0:26,0:9:6.79:0,7,80	0/0:18,0:12:23.33:0,23,195	0/0:18,0:18:50.69:0,51,434	1/1:0,23:23:48.16:650,48,0	1/1:2,26:28:44.67:599,45,0	0/0:9,0:10:14.83:0,15,107	1/1:0,15:15:36.12:490,36,0	0/1:15,0:15:27.14:27,0,136	0/0:10,0:10:5.09:0,5,19	0/1:4,17:21:9.69:274,0,10	1/1:0,12:12:18.06:246,18,0	1/1:0,11:11:14.78:175,15,0	0/1:1,12:13:0.95:264,0,1	1/1:1,16:17:5.61:317,6,0	1/1:2,39:41:68.07:898,68,0	1/1:2,22:24:36.14:530,36,0	1/1:2,14:16:40.18:401,40,0	1/1:1,11:12:20.28:182,20,0	1/1:6,21:27:2.27:232,2,0	1/1:2,13:15:18.01:246,18,0	0/0:9,0:9:26.94:0,27,271	0/0:16,0:16:47.49:0,47,509	1/1:1,12:13:18.79:293,19,0	1/1:3,15:18:26.79:328,27,0	1/1:1,11:12:16.68:210,17,0	1/1:5,0:5:2.95:23,3,0
chr10	68719030	.	GAA	G	6738.25	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=0.709;DP=566;FS=1.590;HRun=12;HaplotypeScore=79.5450;InbreedingCoeff=0.8925;MQ=68.14;MQ0=5;MQRankSum=-0.397;QD=21.39;ReadPosRankSum=5.026;VQSLOD=4.5492;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:28:71.70:0,72,978	1/1:3,4:7:9.01:92,9,0	0/0:26,0:16:1.78:0,2,240	0/0:32,0:22:1.61:0,2,315	0/0:18,0:19:51.07:0,51,696	1/1:2,8:12:14.49:186,14,0	1/1:6,14:20:33.04:336,33,0	0/0:28,0:28:60.23:0,60,717	1/1:1,15:16:36.08:366,36,0	0/0:2,2:28:2.69:0,3,146	0/0:4,0:21:48.26:0,48,219	1/1:2,13:15:33.07:336,33,0	1/1:6,8:14:23.20:275,23,0	1/1:0,18:18:41.79:427,42,0	1/1:0,18:18:45.10:458,45,0	1/1:2,17:20:35.81:418,36,0	1/1:4,33:36:72.15:732,72,0	0/0:38,0:39:99:0,105,1475	1/1:5,13:19:44.52:407,45,0	1/1:1,20:21:50.78:557,51,0	1/1:2,10:11:27.06:275,27,0	1/1:0,9:10:14.75:205,15,0	0/0:15,0:15:33.58:0,34,493	0/0:12,0:12:32.60:0,33,457	1/1:2,20:21:51.10:519,51,0	1/1:2,8:10:24.04:244,24,0	1/1:4,20:24:54.09:549,54,0	1/1:4,14:19:29.78:357,30,0
chr10	68719411	.	TTTG	T	1707.70	PASS	AB=0.991;AC=24;AF=0.429;AN=56;BaseQRankSum=14.482;DP=628;FS=9.182;HRun=0;HaplotypeScore=121.4263;InbreedingCoeff=-0.2735;MQ=64.77;MQ0=14;MQRankSum=0.531;QD=3.95;ReadPosRankSum=9.057;VQSLOD=-0.0423;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:63.53:0,64,907	0/1:17,1:17:32.95:33,0,64	0/0:32,0:12:14.62:0,15,131	0/0:32,0:18:25.10:0,25,286	0/1:19,0:19:2.74:3,0,554	0/1:20,0:19:30.72:58,0,31	0/1:21,0:21:99:108,0,153	0/0:30,0:29:46.18:0,46,520	0/1:22,0:21:53.67:54,0,63	0/1:27,0:25:50.31:110,0,50	1/1:28,0:28:44.96:207,45,0	1/1:14,0:14:4.84:84,5,0	0/1:18,0:18:24.65:98,0,25	0/1:14,0:13:5.77:57,0,6	0/1:30,0:30:83.35:117,0,83	0/1:33,0:33:99:118,0,176	1/1:20,1:21:14.53:136,15,0	0/0:31,0:31:86.94:0,87,1102	0/1:15,0:15:3.09:3,0,143	0/1:19,0:17:72.77:75,0,73	0/1:11,1:12:56.80:57,0,88	0/1:23,0:23:89.87:121,0,90	0/0:15,0:15:36.80:0,37,378	0/0:26,0:26:49.04:0,49,819	0/1:14,0:13:12.91:13,0,75	0/1:24,0:24:99:160,0,104	0/1:26,1:26:12.78:204,0,13	0/1:13,0:13:27.30:62,0,27
chr10	68719414	.	GTTT	G	7526.02	PASS	AB=0.600;AC=39;AF=0.696;AN=56;BaseQRankSum=0.340;DP=617;FS=0.000;HRun=16;HaplotypeScore=102.2390;InbreedingCoeff=0.9209;MQ=63.34;MQ0=14;MQRankSum=2.566;QD=18.58;ReadPosRankSum=7.167;VQSLOD=3.7474;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:29:65.77:0,66,943	1/1:4,13:16:13.93:274,14,0	0/0:30,0:10:12.02:0,12,136	0/0:33,0:17:11.98:0,12,127	0/0:20,0:21:54.60:0,55,763	1/1:5,15:19:32.80:355,33,0	1/1:14,7:22:25.31:343,25,0	0/0:13,0:27:64.72:0,65,565	1/1:7,14:21:34.44:384,34,0	1/1:10,16:24:59.41:628,59,0	1/1:3,25:28:74.94:766,75,0	1/1:1,12:14:33:335,33,0	0/1:5,10:15:0.81:229,0,1	1/1:2,9:10:18.01:194,18,0	1/1:9,20:29:50.85:524,51,0	1/1:13,17:33:61.73:648,62,0	1/1:3,17:20:30.12:407,30,0	0/0:29,0:29:66.17:0,66,777	1/1:8,9:17:22.44:220,22,0	1/1:6,11:17:25.30:267,25,0	1/1:7,5:12:11.44:155,11,0	1/1:5,17:23:38.59:398,39,0	0/0:17,0:17:33.05:0,33,443	0/0:18,0:24:60.10:0,60,852	1/1:4,9:12:11.88:129,12,0	1/1:9,15:25:44.70:464,45,0	1/1:7,19:27:51.03:561,51,0	1/1:3,9:12:11.61:243,12,0
chr10	68719417	.	T	TTG	1068.96	PASS	AB=0.978;AC=15;AF=0.268;AN=56;BaseQRankSum=1.845;DP=609;FS=1.339;HRun=0;HaplotypeScore=117.1255;InbreedingCoeff=-0.0172;MQ=63.91;MQ0=13;MQRankSum=0.643;QD=4.00;ReadPosRankSum=-1.672;VQSLOD=2.3358;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:68.40:0,68,858	0/0:16,1:16:1.58:0,2,240	0/0:31,0:10:26.78:0,27,227	0/0:32,0:16:12.85:0,13,133	0/0:22,0:22:56.30:0,56,592	0/0:20,0:19:38.89:0,39,314	0/1:20,2:22:42.90:43,0,297	0/0:27,0:26:73.67:0,74,614	0/1:20,0:20:45.97:46,0,274	1/1:24,0:23:52.55:294,53,0	1/1:28,0:28:47.55:326,48,0	0/1:13,0:13:75.02:75,0,155	0/1:14,1:15:27.40:27,0,169	0/0:10,1:10:20.33:0,20,146	0/1:28,0:28:40.97:41,0,348	0/0:32,2:34:48.97:0,49,664	0/1:19,0:19:89.19:89,0,163	0/0:28,0:28:83.74:0,84,1004	0/1:18,0:18:99:109,0,173	0/1:19,1:18:60.43:60,0,202	0/1:10,0:10:7.02:7,0,118	0/1:23,0:23:30.36:30,0,357	0/0:15,0:15:42.05:0,42,457	0/0:26,0:26:69.08:0,69,832	0/0:12,1:12:17.69:0,18,133	0/1:25,0:25:88.27:88,0,229	0/0:26,0:25:63.21:0,63,451	0/0:12,0:12:28.73:0,29,204
chr10	68719418	.	T	TG	469.33	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.630;DP=612;FS=3.177;HRun=0;HaplotypeScore=112.7105;InbreedingCoeff=0.8520;MQ=63.74;MQ0=13;MQRankSum=-1.153;QD=9.03;ReadPosRankSum=0.151;VQSLOD=3.4942;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:78.51:0,79,831	0/0:17,0:16:37.15:0,37,302	0/0:31,0:10:26.39:0,26,224	0/0:30,0:15:4.15:0,4,122	0/0:22,0:22:57.75:0,58,598	0/0:21,0:20:41.79:0,42,331	0/0:21,1:22:6.12:0,6,359	0/0:28,0:27:74.81:0,75,637	0/0:21,0:20:36.91:0,37,338	1/1:20,4:22:59.82:327,60,0	1/1:28,0:28:54.68:264,55,0	0/0:13,0:13:8.94:0,9,168	0/0:15,0:15:19.14:0,19,223	0/0:11,0:10:20.96:0,21,173	0/0:27,1:28:37.85:0,38,413	0/0:34,0:34:85.48:0,85,731	0/0:20,0:20:27.79:0,28,247	0/0:28,0:28:83.73:0,84,940	0/0:18,0:18:34.07:0,34,305	0/0:19,0:17:30.66:0,31,255	0/0:10,0:10:22.20:0,22,187	0/0:23,0:23:47.78:0,48,405	0/0:15,0:15:42.05:0,42,451	0/0:26,0:26:67.02:0,67,751	0/0:13,0:12:20.87:0,21,163	0/0:25,0:25:47.06:0,47,384	0/0:27,0:26:49.19:0,49,491	0/0:14,0:14:29.82:0,30,236
chr10	68720465	.	G	GA	1531.12	PASS	AB=0.781;AC=34;AF=0.607;AN=56;BaseQRankSum=-1.276;DP=500;FS=13.531;HRun=15;HaplotypeScore=64.8858;InbreedingCoeff=0.1673;MQ=59.15;MQ0=7;MQRankSum=-2.712;QD=3.72;ReadPosRankSum=0.748;VQSLOD=-0.4800;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:38,2:41:26.02:26,0,178	0/1:2,1:4:0:0,0,0	0/1:13,0:9:9.82:10,0,10	0/1:10,1:6:1.59:2,0,22	0/0:13,0:13:13.59:0,14,76	0/1:9,5:15:19.19:42,0,19	1/1:20,3:22:25.17:175,25,0	0/1:26,0:26:3.12:3,0,70	0/1:6,7:13:6.05:57,0,6	0/0:7,0:19:23.55:0,24,67	0/0:10,0:12:3.96:0,4,11	1/1:4,6:10:3:25,3,0	1/1:10,6:15:7.15:44,7,0	1/1:10,1:10:14.92:117,15,0	1/1:7,4:11:10.31:71,10,0	0/1:6,7:14:6.12:48,0,6	0/1:13,20:35:13.29:135,0,13	0/1:8,9:17:8.05:72,0,8	0/1:23,1:23:5.32:151,0,5	1/1:8,11:18:28.05:202,28,0	1/1:13,1:13:8.49:75,8,0	1/1:8,5:13:11.18:81,11,0	0/0:18,3:20:18.26:0,18,106	0/0:22,0:22:9.79:0,10,103	1/1:5,17:22:14.93:119,15,0	1/1:20,2:20:3.34:117,3,0	0/1:9,10:18:6.64:77,0,7	1/1:9,4:13:5.99:51,6,0
chr10	68720610	.	GTCCC	G	3141.85	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-1.724;DP=276;FS=30.732;HRun=0;HaplotypeScore=54.7330;InbreedingCoeff=0.7948;MQ=87.27;MQ0=1;MQRankSum=-5.310;QD=18.70;ReadPosRankSum=-0.960;VQSLOD=1.4435;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:29.77:0,30,349	1/1:1,1:2:2.89:20,3,0	0/0:24,0:21:41.30:0,41,475	0/0:21,0:16:31.56:0,32,484	0/0:3,0:3:5.99:0,6,50	1/1:0,10:10:9.03:165,9,0	1/1:11,2:13:30.56:366,31,0	0/0:21,0:21:35.72:0,36,282	1/1:1,7:9:9.03:152,9,0	1/1:14,0:14:23.96:221,24,0	1/1:8,0:8:12.01:142,12,0	1/1:10,0:10:3.01:42,3,0	1/1:9,0:9:23.97:231,24,0	1/1:4,0:5:15.01:160,15,0	1/1:7,1:8:8.98:138,9,0	1/1:10,0:9:23.97:258,24,0	1/1:9,3:13:35.91:380,36,0	0/0:17,0:17:42.65:0,43,438	1/1:9,0:9:26.88:224,27,0	1/1:3,0:3:8.97:85,9,0	1/1:5,2:7:12.01:121,12,0	1/1:7,2:9:20.93:217,21,0	0/0:3,0:4:8.61:0,9,85	0/0:5,0:5:9.01:0,9,168	1/1:1,5:6:3.01:56,3,0	1/1:10,0:10:23.86:207,24,0	1/1:1,8:9:2.59:55,3,0	1/1:4,0:4:11.98:98,12,0
chr10	68720611	.	TCCCTC	T	3046.82	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-1.793;DP=272;FS=35.848;HRun=0;HaplotypeScore=58.6955;InbreedingCoeff=0.7764;MQ=87.61;MQ0=1;MQRankSum=-3.936;QD=18.24;ReadPosRankSum=-1.145;VQSLOD=0.8065;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:30.01:0,30,453	1/1:2,0:2:2.97:20,3,0	0/0:24,0:21:40.79:0,41,562	0/0:21,0:16:37.65:0,38,616	0/0:3,0:3:5.99:0,6,50	1/1:10,0:10:9.03:103,9,0	1/1:13,0:13:7.16:205,7,0	0/0:20,0:20:44.58:0,45,404	1/1:8,1:9:9.02:137,9,0	1/1:2,0:13:23.96:233,24,0	1/1:0,0:8:12.04:177,12,0	1/1:1,9:10:3.01:63,3,0	1/1:7,2:9:23.97:272,24,0	1/1:4,1:5:11.14:176,11,0	1/1:2,6:8:8.97:159,9,0	1/1:6,4:9:23.97:343,24,0	1/1:13,0:13:36.36:295,36,0	0/0:17,0:17:44.97:0,45,606	1/1:8,1:9:26.88:246,27,0	1/1:2,0:3:8.97:91,9,0	1/1:7,1:8:9.89:118,10,0	1/1:8,1:9:20.94:252,21,0	0/0:4,0:4:9.01:0,9,127	0/0:4,0:4:9.01:0,9,196	1/1:5,0:5:3:27,3,0	1/1:9,0:10:23.86:212,24,0	1/1:9,0:9:2.80:37,3,0	1/1:4,0:4:9.86:75,10,0
chr10	68720612	.	CCCT	C	2778.72	PASS	AB=1.000;AC=41;AF=0.732;AN=56;BaseQRankSum=-0.553;DP=267;FS=13.403;HRun=0;HaplotypeScore=50.2077;InbreedingCoeff=0.6760;MQ=85.38;MQ0=1;MQRankSum=-4.982;QD=15.10;ReadPosRankSum=-0.362;VQSLOD=1.6377;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:29.04:0,29,272	1/1:1,1:2:2.86:19,3,0	0/0:22,0:19:40.52:0,41,400	0/0:21,0:16:38.99:0,39,412	0/0:4,0:4:5.99:0,6,50	1/1:10,0:10:9.03:108,9,0	1/1:11,2:13:32.31:336,32,0	0/1:20,0:20:28.21:28,0,182	1/1:8,1:9:9.03:108,9,0	1/1:13,0:13:23.95:209,24,0	1/1:8,0:8:11.97:122,12,0	1/1:10,0:10:3.01:35,3,0	1/1:8,0:8:23.97:217,24,0	1/1:5,0:5:15.01:150,15,0	1/1:8,0:8:8.99:108,9,0	1/1:9,0:8:23.96:233,24,0	1/1:13,0:13:35.91:319,36,0	0/0:17,0:17:28.09:0,28,289	1/1:8,1:9:26.88:218,27,0	1/1:3,0:3:8.96:79,9,0	1/1:8,0:8:12.01:115,12,0	1/1:9,0:9:20.93:188,21,0	0/0:4,0:4:1.74:0,2,45	0/0:4,0:4:9.01:0,9,141	1/1:5,0:5:3.01:35,3,0	1/1:9,0:9:23.86:201,24,0	1/1:9,0:9:2.80:35,3,0	1/1:4,0:4:11.98:98,12,0
chr10	68720614	.	CT	C	2320.20	PASS	AB=0.786;AC=40;AF=0.714;AN=56;BaseQRankSum=0.455;DP=270;FS=19.789;HRun=1;HaplotypeScore=48.2162;InbreedingCoeff=0.6207;MQ=84.69;MQ0=1;MQRankSum=-4.348;QD=13.57;ReadPosRankSum=0.515;VQSLOD=1.0787;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:9,4:13:7.78:0,8,170	1/1:2,0:2:2.82:20,3,0	0/0:22,1:19:1.38:0,1,194	0/0:20,0:15:28.63:0,29,262	0/0:4,0:4:5.99:0,6,49	1/1:10,0:10:8.97:69,9,0	1/1:12,2:14:32.79:256,33,0	0/0:18,0:18:41.80:0,42,285	1/1:10,0:10:8.97:71,9,0	1/1:11,0:11:23.91:186,24,0	1/1:8,0:8:11.89:86,12,0	1/1:9,0:9:2.99:23,3,0	1/1:9,0:9:23.93:194,24,0	1/1:5,0:5:14.97:122,15,0	1/1:8,0:8:8.95:70,9,0	1/1:9,0:8:23.88:186,24,0	1/1:14,0:14:38.75:306,39,0	0/0:17,0:17:5.29:0,5,163	1/1:9,0:9:26.86:207,27,0	1/1:3,0:3:8.94:68,9,0	1/1:7,0:7:11.99:103,12,0	1/1:9,0:9:20.89:160,21,0	0/1:1,3:4:16.10:41,0,16	0/0:4,0:4:9.01:0,9,93	1/1:5,0:5:2.99:23,3,0	1/1:9,0:9:23.84:189,24,0	0/1:11,0:11:1.67:18,0,2	1/1:5,0:5:11.98:99,12,0
chr10	68723700	.	C	CGTGTGT	5991.82	PASS	AB=0.823;AC=40;AF=0.769;AN=52;BaseQRankSum=4.444;DP=695;FS=8.056;HRun=0;HaplotypeScore=205.1468;InbreedingCoeff=0.4433;MQ=59.98;MQ0=4;MQRankSum=-6.162;QD=11.14;ReadPosRankSum=-2.475;VQSLOD=2.4940;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:43.67:0,44,787	1/1:11,0:11:3.01:50,3,0	./.	./.	0/0:18,0:18:21.07:0,21,400	1/1:14,0:21:3.01:50,3,0	0/1:26,0:35:30.51:237,0,31	1/1:25,0:25:42.05:715,42,0	1/1:17,5:23:4.53:101,5,0	0/1:25,0:33:34.13:71,0,34	0/1:11,0:13:8.32:8,0,41	1/1:28,1:31:18.06:313,18,0	1/1:16,0:24:13.87:314,14,0	0/1:22,4:28:40.40:136,0,40	1/1:22,8:32:21.07:582,21,0	1/1:18,5:23:17.65:400,18,0	1/1:24,1:26:24.01:471,24,0	1/1:12,0:17:20.50:314,21,0	1/1:21,0:21:6.63:108,7,0	1/1:13,1:14:9.03:232,9,0	1/1:45,0:46:24.14:381,24,0	1/1:19,2:23:11.83:255,12,0	0/0:11,0:12:18.06:0,18,335	0/0:26,0:32:33.10:0,33,613	1/1:15,6:22:16.86:374,17,0	1/1:28,4:34:37.08:547,37,0	1/1:17,0:19:13.86:256,14,0	1/1:12,0:15:3.01:79,3,0
chr10	68727376	.	T	TGGAATGGAGGAGTCCCA	84643.93	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-1.591;DP=736;FS=7.930;HRun=0;HaplotypeScore=298.5996;InbreedingCoeff=0.9983;MQ=75.85;MQ0=0;MQRankSum=-19.134;QD=164.68;ReadPosRankSum=4.245;VQSLOD=4.0227;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,120,5006	1/1:16,2:20:51.17:3577,51,0	0/0:25,0:25:69.24:0,69,2670	0/0:29,0:28:66.18:0,66,2593	0/0:21,0:21:57.18:0,57,2193	1/1:17,9:26:63.21:4466,63,0	1/1:19,4:27:63.22:4337,63,0	0/0:20,0:20:57.19:0,57,2510	1/1:16,10:31:75.26:5677,75,0	1/1:27,5:37:99:5727,102,0	1/1:13,5:18:30.06:1624,30,0	1/1:20,8:33:87.30:6186,87,0	1/1:25,8:34:90.31:6679,90,0	1/1:14,9:29:63.22:4194,63,0	1/1:22,11:34:96.33:6735,96,0	1/1:16,5:24:60.21:4513,60,0	1/1:16,10:30:60.21:4092,60,0	0/0:33,0:33:96.33:0,96,4477	1/1:9,2:18:48.14:1941,48,0	1/1:18,5:23:36.04:2358,36,0	1/1:10,2:18:17.72:1255,18,0	1/1:7,6:18:28.14:2261,28,0	0/0:24,0:24:63.22:0,63,2620	0/0:28,0:28:75.26:0,75,3396	1/1:13,13:25:75.26:5448,75,0	1/1:24,12:37:99:7453,105,0	1/1:9,7:18:48.16:3623,48,0	1/1:7,5:13:36.12:2496,36,0
chr10	68730727	.	A	AG	755.60	PASS	AB=0.600;AC=33;AF=0.717;AN=46;BaseQRankSum=-1.079;DP=138;FS=3.466;HRun=5;HaplotypeScore=22.1826;InbreedingCoeff=0.5465;MQ=74.99;MQ0=2;MQRankSum=-2.273;QD=11.81;ReadPosRankSum=-3.686;VQSLOD=-0.3772;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:30.08:0,30,322	./.	0/0:13,0:8:23.81:0,24,216	0/0:16,0:11:27.02:0,27,268	0/0:3,0:3:9.01:0,9,88	./.	1/1:1,5:6:9.03:117,9,0	1/1:6,0:6:2.73:38,3,0	1/1:3,2:5:12.02:138,12,0	./.	1/1:0,1:1:3.01:39,3,0	0/1:1,2:3:3.63:64,0,4	1/1:3,0:3:0.47:1,0,0	1/1:1,0:1:3:25,3,0	1/1:1,2:3:3.01:39,3,0	1/1:5,0:5:3:25,3,0	./.	1/1:4,0:4:0.89:2,1,0	1/1:3,2:5:12:133,12,0	1/1:3,2:5:6.02:69,6,0	./.	1/1:0,3:3:6.02:73,6,0	0/0:9,0:9:21.05:0,21,225	0/0:10,0:10:27.07:0,27,290	1/1:4,0:4:6:59,6,0	1/1:2,0:2:1.24:3,1,0	1/1:3,3:6:3.01:39,3,0	1/1:0,2:2:3.01:39,3,0
chr10	68734191	.	C	CT	333.85	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=-1.601;DP=478;FS=5.546;HRun=10;HaplotypeScore=56.6907;InbreedingCoeff=0.3747;MQ=75.22;MQ0=11;MQRankSum=0.056;QD=6.81;ReadPosRankSum=-0.008;VQSLOD=1.1467;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,3:34:4.94:0,5,453	0/0:4,0:4:5.98:0,6,49	0/1:28,0:18:16.17:16,0,155	0/0:22,0:12:12.22:0,12,109	0/0:12,1:13:0.98:0,1,214	0/0:15,0:14:32.96:0,33,271	0/0:16,0:17:37.94:0,38,295	0/0:38,0:38:84.21:0,84,671	0/0:18,0:18:31.99:0,32,252	0/0:15,0:16:40.99:0,41,326	0/0:13,0:13:32.56:0,33,248	0/0:7,0:7:17.98:0,18,148	0/0:14,0:12:29.89:0,30,239	0/0:10,0:11:25.99:0,26,203	0/0:19,0:19:50.92:0,51,415	0/0:11,1:13:0.01:0,0,193	0/0:22,0:22:46.97:0,47,374	1/1:4,17:20:17.22:418,17,0	0/0:18,0:17:33.42:0,33,272	0/0:10,0:10:26.96:0,27,222	0/0:13,0:14:34.99:0,35,276	0/0:6,0:6:11.98:0,12,98	0/0:16,0:16:35.95:0,36,295	0/0:20,0:18:37.57:0,38,314	0/0:6,0:6:14.98:0,15,123	0/0:21,2:23:10.11:0,10,387	0/0:25,0:25:59.91:0,60,492	0/0:14,0:14:38.82:0,39,302
chr10	68734992	.	T	TA	7176.44	PASS	AB=0.763;AC=39;AF=0.696;AN=56;BaseQRankSum=7.177;DP=619;FS=5.202;HRun=10;HaplotypeScore=144.6385;InbreedingCoeff=0.6403;MQ=67.62;MQ0=3;MQRankSum=-8.883;QD=15.98;ReadPosRankSum=-2.153;VQSLOD=3.2985;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:95.03:0,95,771	0/1:4,5:9:1.04:150,0,1	0/1:32,1:14:30.64:31,0,69	0/1:27,0:19:20.74:21,0,72	0/0:35,1:37:44.91:0,45,565	1/1:8,14:22:56.90:533,57,0	1/1:8,9:17:38.71:377,39,0	0/0:30,0:31:61.86:0,62,488	1/1:3,10:13:33.02:337,33,0	1/1:5,12:16:42.05:432,42,0	1/1:6,10:13:29.45:251,29,0	1/1:14,10:24:19.98:371,20,0	1/1:7,9:17:35.98:353,36,0	1/1:17,3:20:29.52:246,30,0	1/1:13,13:26:54.69:502,55,0	1/1:3,6:9:21.01:211,21,0	1/1:14,9:23:35.79:328,36,0	0/0:34,0:34:77.83:0,78,634	1/1:10,13:23:45.08:465,45,0	1/1:11,19:30:25.25:611,25,0	1/1:6,2:8:8.89:61,9,0	1/1:13,11:25:33.69:313,34,0	0/0:19,0:19:47.90:0,48,388	0/0:14,0:14:35.96:0,36,296	1/1:10,17:27:37.97:532,38,0	1/1:14,17:31:45.98:600,46,0	0/1:9,10:19:10.04:264,0,10	0/1:2,6:8:0.59:189,0,1
chr10	68735008	.	AAAAAAC	A	7488.27	PASS	AB=0.967;AC=40;AF=0.714;AN=56;BaseQRankSum=11.522;DP=642;FS=7.522;HRun=0;HaplotypeScore=183.6640;InbreedingCoeff=0.7978;MQ=62.27;MQ0=10;MQRankSum=-9.507;QD=17.74;ReadPosRankSum=-2.276;VQSLOD=3.4422;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,105,2917	1/1:6,0:6:17.69:153,18,0	0/0:49,0:15:16.74:0,17,266	0/1:34,0:18:0.85:1,0,399	0/0:31,0:31:87.28:0,87,2666	1/1:24,0:24:60.36:555,60,0	1/1:19,0:19:28.28:367,28,0	0/0:31,0:31:71.85:0,72,1153	1/1:17,1:18:23.68:250,24,0	1/1:23,0:22:30.46:497,30,0	1/1:22,0:18:0.36:321,0,0	1/1:20,1:21:42.40:409,42,0	1/1:17,0:17:39.15:312,39,0	1/1:16,0:16:30.05:268,30,0	1/1:24,2:26:58.15:636,58,0	1/1:14,0:13:23.09:225,23,0	1/1:20,1:21:30.34:350,30,0	0/0:33,0:33:82.63:0,83,1302	1/1:24,1:23:44.46:437,44,0	0/1:26,2:28:43.86:524,0,44	1/1:9,0:8:2.94:18,3,0	1/1:17,1:18:28.30:257,28,0	0/0:23,0:23:69.24:0,69,1977	0/0:16,0:16:45.15:0,45,1264	1/1:20,0:20:38.16:346,38,0	1/1:31,1:31:77.83:774,78,0	1/1:17,1:18:48.27:467,48,0	1/1:10,1:11:25.24:321,25,0
chr10	68735009	.	AAAAAC	A	13157.15	PASS	AB=0.737;AC=39;AF=0.696;AN=56;BaseQRankSum=7.416;DP=643;FS=9.015;HRun=0;HaplotypeScore=153.2582;InbreedingCoeff=0.8258;MQ=61.50;MQ0=10;MQRankSum=-9.743;QD=33.82;ReadPosRankSum=-2.725;VQSLOD=3.5083;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,105,2585	1/1:4,2:6:18.06:312,18,0	0/0:48,0:15:0.59:0,1,245	0/0:34,0:18:5.61:0,6,344	0/0:30,0:30:87.28:0,87,2310	1/1:12,12:24:65.05:1006,65,0	1/1:10,9:19:30.49:653,30,0	0/0:32,0:32:53.40:0,53,891	1/1:8,10:18:23.69:368,24,0	1/1:14,9:22:50.65:888,51,0	1/1:15,8:19:32.37:701,32,0	1/1:10,11:21:44.92:604,45,0	1/1:12,6:18:44.87:690,45,0	1/1:9,7:16:35.44:511,35,0	1/1:12,14:26:60.16:931,60,0	1/1:5,9:13:24.08:446,24,0	1/1:7,14:21:36.10:625,36,0	0/0:33,0:33:76.46:0,76,952	1/1:9,14:21:56.72:798,57,0	0/1:18,10:28:26.89:899,0,27	1/1:2,7:8:3.01:46,3,0	1/1:9,8:17:35.77:483,36,0	0/0:23,0:23:69.24:0,69,1767	0/0:16,0:16:45.14:0,45,1138	1/1:8,12:20:39.12:663,39,0	1/1:16,16:31:83.70:1292,84,0	1/1:14,6:20:55.49:821,55,0	1/1:10,1:11:32.92:421,33,0
chr10	68735010	.	AAAAC	A	10297.15	PASS	AB=0.938;AC=40;AF=0.714;AN=56;BaseQRankSum=10.447;DP=644;FS=6.017;HRun=0;HaplotypeScore=152.9587;InbreedingCoeff=0.8236;MQ=61.50;MQ0=10;MQRankSum=-9.693;QD=23.51;ReadPosRankSum=-3.903;VQSLOD=3.5471;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,105,2228	1/1:6,0:6:18.05:219,18,0	0/1:50,0:16:4.84:5,0,190	0/0:33,0:17:19.72:0,20,297	0/0:30,0:30:87.27:0,87,1938	1/1:23,1:24:65.89:844,66,0	1/1:18,0:18:43.25:469,43,0	0/0:34,0:34:58.79:0,59,654	1/1:18,0:18:23.76:273,24,0	1/1:24,2:25:62.31:779,62,0	1/1:23,0:19:50.60:539,51,0	1/1:19,2:21:45.05:553,45,0	1/1:17,1:18:44.89:524,45,0	1/1:16,0:16:36.07:423,36,0	1/1:22,2:24:60.10:742,60,0	1/1:14,0:13:24.04:301,24,0	1/1:21,0:21:36.10:443,36,0	0/0:33,0:33:74.81:0,75,592	1/1:22,1:21:55.81:660,56,0	0/1:24,4:28:11.43:719,0,11	1/1:9,0:8:3:28,3,0	1/1:17,0:17:35.40:410,35,0	0/0:24,0:24:72.23:0,72,1529	0/0:16,0:16:45.14:0,45,968	1/1:20,0:20:39.09:474,39,0	1/1:31,0:30:81.58:937,82,0	1/1:20,0:20:51.01:616,51,0	1/1:11,0:11:32.99:341,33,0
chr10	68735011	.	AAAC	A	9138	PASS	AB=0.966;AC=39;AF=0.696;AN=56;BaseQRankSum=10.929;DP=639;FS=1.557;HRun=0;HaplotypeScore=145.4224;InbreedingCoeff=0.8947;MQ=62.26;MQ0=10;MQRankSum=-10.086;QD=23.80;ReadPosRankSum=-4.696;VQSLOD=3.6763;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,105,1842	1/1:5,1:6:18.04:201,18,0	0/0:51,0:17:2.79:0,3,174	0/0:32,0:16:17.59:0,18,236	0/0:30,0:30:87.26:0,87,1586	1/1:24,1:25:69.01:718,69,0	1/1:18,0:18:41.04:410,41,0	0/0:32,0:32:33.74:0,34,409	1/1:16,0:16:23.82:240,24,0	1/1:27,0:26:70.07:735,70,0	1/1:23,0:19:50.95:527,51,0	1/1:21,0:21:45.03:459,45,0	1/1:18,0:18:45.03:485,45,0	1/1:13,2:15:36.05:402,36,0	1/1:24,0:24:59.90:603,60,0	1/1:13,0:12:24.04:261,24,0	1/1:21,0:21:36.07:395,36,0	0/0:33,0:33:46.62:0,47,205	1/1:22,1:21:54.48:589,54,0	0/1:27,1:28:0.09:600,0,0	1/1:9,0:8:2.99:24,3,0	1/1:16,1:17:36.89:386,37,0	0/0:24,0:24:72.18:0,72,1246	0/0:16,0:16:45.11:0,45,774	1/1:18,0:18:39.05:406,39,0	1/1:30,1:30:81.15:831,81,0	1/1:20,0:20:51.59:545,52,0	1/1:11,0:11:32.78:323,33,0
chr10	68735013	.	AC	A	7607.77	PASS	AB=0.969;AC=43;AF=0.768;AN=56;BaseQRankSum=12.306;DP=635;FS=1.235;HRun=1;HaplotypeScore=129.8390;InbreedingCoeff=0.8295;MQ=63.97;MQ0=10;MQRankSum=-8.963;QD=17.13;ReadPosRankSum=-3.133;VQSLOD=4.1154;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:88.20:0,88,1104	1/1:6,1:7:20.90:166,21,0	0/0:49,2:16:7.32:0,7,113	0/0:34,0:18:6.16:0,6,80	0/0:29,0:29:86.57:0,87,926	1/1:23,2:25:71.73:562,72,0	1/1:14,3:17:41.79:312,42,0	0/1:30,1:31:71.87:72,0,88	1/1:14,0:14:23.89:186,24,0	1/1:26,1:26:74.83:626,75,0	1/1:18,4:18:50.86:428,51,0	1/1:21,0:21:44.81:356,45,0	1/1:14,4:18:44.85:362,45,0	1/1:14,1:15:35.82:277,36,0	1/1:23,1:24:59.06:434,59,0	1/1:11,2:12:23.89:180,24,0	1/1:19,2:21:35.83:273,36,0	1/1:34,0:34:88.24:451,88,0	1/1:20,2:20:58.28:453,58,0	1/1:27,0:27:29.55:459,30,0	1/1:8,0:7:2.98:21,3,0	1/1:16,1:17:38.81:305,39,0	0/0:24,0:24:68.48:0,68,727	0/0:16,0:16:44.28:0,44,462	1/1:15,3:18:38.85:309,39,0	1/1:27,3:29:81.44:633,81,0	1/1:19,3:22:60.64:481,61,0	1/1:8,3:11:32.80:259,33,0
chr10	68735014	.	CA	C	1764.27	PASS	AB=0.986;AC=39;AF=0.696;AN=56;BaseQRankSum=10.824;DP=647;FS=4.699;HRun=10;HaplotypeScore=154.0072;InbreedingCoeff=0.4673;MQ=65.93;MQ0=11;MQRankSum=-8.743;QD=3.49;ReadPosRankSum=1.205;VQSLOD=0.5259;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,102,1093	0/1:8,0:9:7.06:7,0,38	0/1:53,0:17:1.45:1,0,94	0/0:35,1:20:29.46:0,29,226	0/0:28,0:29:87.04:0,87,925	1/1:25,0:25:32.98:92,33,0	0/1:17,0:17:5.01:26,0,5	1/1:9,21:30:62.86:539,63,0	1/1:14,0:14:8.26:25,8,0	1/1:28,0:27:25.37:87,25,0	1/1:22,0:18:23.78:71,24,0	1/1:21,0:21:14.44:44,14,0	1/1:18,0:18:18.79:53,19,0	0/1:17,0:17:23.49:23,0,25	1/1:24,0:24:6.44:50,6,0	1/1:13,0:12:14.04:41,14,0	1/1:21,0:21:19.13:55,19,0	1/1:34,1:35:88.79:523,89,0	1/1:22,0:20:7.91:55,8,0	0/1:27,0:27:37.95:38,0,65	0/1:10,0:9:1.47:1,0,18	1/1:17,0:17:15.41:45,15,0	0/0:23,1:24:43:0,43,682	0/0:16,0:16:42.09:0,42,451	1/1:18,0:18:18.35:53,18,0	0/1:31,0:31:48.04:53,0,48	1/1:21,0:21:11.16:49,11,0	1/1:11,0:11:5.89:21,6,0
chr10	68735021	.	AAAAC	A	1987.63	PASS	AB=0.927;AC=24;AF=0.429;AN=56;BaseQRankSum=14.029;DP=655;FS=63.675;HRun=0;HaplotypeScore=179.0803;InbreedingCoeff=-0.1332;MQ=65.98;MQ0=11;MQRankSum=-14.454;QD=5.10;ReadPosRankSum=2.297;VQSLOD=0.3865;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,105,2142	0/1:8,1:9:74.80:75,0,96	0/0:53,0:17:24.78:0,25,217	0/0:35,0:21:28.42:0,28,497	0/0:31,0:31:90.25:0,90,1947	1/1:21,1:22:11.78:191,12,0	1/1:13,3:16:18.90:164,19,0	0/0:30,0:30:64.04:0,64,803	0/1:14,0:14:0.93:99,0,1	0/1:25,1:25:99:114,0,179	0/1:18,3:17:81.16:81,0,87	1/1:20,0:20:3.87:157,4,0	0/1:17,3:20:44.54:164,0,45	0/1:17,1:18:39.34:39,0,103	1/1:24,0:24:42.22:224,42,0	0/1:13,2:14:48.52:60,0,49	0/1:22,2:24:81.27:81,0,141	0/0:34,0:34:80.15:0,80,1241	0/1:21,1:20:41.42:110,0,41	0/1:26,0:26:94.22:114,0,94	0/1:11,0:10:4.65:5,0,152	0/1:17,1:18:57.27:68,0,57	0/0:25,0:25:72.17:0,72,1502	0/0:17,0:17:51.07:0,51,1044	0/1:16,3:19:33.39:97,0,33	0/1:28,2:29:99:118,0,166	0/1:23,2:24:99:104,0,224	0/1:8,2:10:8.12:98,0,8
chr10	68736630	.	GT	G	205.77	PASS	AB=0.974;AC=6;AF=0.107;AN=56;BaseQRankSum=-4.040;DP=641;FS=0.633;HRun=14;HaplotypeScore=130.6191;InbreedingCoeff=0.2518;MQ=66.77;MQ0=13;MQRankSum=-0.057;QD=1.12;ReadPosRankSum=-3.768;VQSLOD=-0.3347;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:91.36:0,91,828	0/0:11,0:11:20.24:0,20,114	0/1:56,1:26:14.57:15,0,130	0/1:45,1:21:7.19:7,0,47	0/0:24,2:27:15.73:0,16,407	0/0:19,0:19:37.70:0,38,206	0/1:13,1:14:26.41:26,0,75	1/1:19,12:31:40.92:255,41,0	0/0:23,0:23:42.99:0,43,233	0/0:15,0:14:32.56:0,33,199	0/0:18,0:18:27.54:0,28,151	0/0:23,0:22:32.49:0,32,209	0/0:24,0:23:49.34:0,49,282	0/0:21,0:21:49.34:0,49,285	0/0:20,0:20:18.73:0,19,180	0/0:9,0:9:17.41:0,17,99	0/0:23,0:24:41.33:0,41,300	0/1:28,0:27:29.40:29,0,135	0/0:12,0:11:20.31:0,20,121	0/0:24,0:24:56.31:0,56,317	0/0:8,0:8:14.51:0,15,79	0/0:16,0:16:40.43:0,40,258	0/0:20,0:26:60.17:0,60,518	0/0:21,2:23:30.44:0,30,410	0/0:22,1:23:27.93:0,28,252	0/0:24,0:24:60.85:0,61,330	0/0:22,0:22:48.11:0,48,274	0/0:10,0:10:9.47:0,9,110
chr10	68736644	.	T	TA	8235.61	PASS	AB=1.000;AC=43;AF=0.768;AN=56;BaseQRankSum=5.772;DP=661;FS=0.883;HRun=5;HaplotypeScore=107.3764;InbreedingCoeff=0.9403;MQ=66.31;MQ0=14;MQRankSum=1.698;QD=17.83;ReadPosRankSum=0.882;VQSLOD=4.0196;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:87.07:0,87,862	1/1:1,13:14:26.61:259,27,0	0/0:61,0:19:14.90:0,15,158	0/1:50,0:19:0.09:0,0,65	0/0:26,0:26:59.93:0,60,571	1/1:3,16:20:36.09:416,36,0	1/1:6,4:11:24:243,24,0	0/0:23,0:23:50.33:0,50,358	1/1:3,16:20:39.70:440,40,0	1/1:12,4:16:29.42:298,29,0	1/1:4,11:15:34.56:298,35,0	1/1:2,17:21:35.57:378,36,0	1/1:6,25:30:46.33:515,46,0	1/1:10,8:18:39.27:477,39,0	1/1:2,19:23:33.08:381,33,0	1/1:1,9:11:14.90:166,15,0	1/1:16,11:27:73.29:710,73,0	1/1:28,2:29:54.36:340,54,0	1/1:2,8:9:24.03:253,24,0	1/1:4,19:24:58.08:595,58,0	1/1:0,8:8:15.05:179,15,0	1/1:2,20:22:39.40:398,39,0	0/0:28,0:28:50.63:0,51,514	0/0:22,0:22:45.02:0,45,451	1/1:16,9:26:54.37:518,54,0	1/1:9,18:27:57.43:534,57,0	1/1:17,7:25:60.12:565,60,0	1/1:7,5:12:28.55:276,29,0
chr10	68736743	.	ATGTG	A	213.40	PASS	AB=0.944;AC=6;AF=0.111;AN=54;BaseQRankSum=1.969;DP=611;FS=4.395;HRun=0;HaplotypeScore=98.3410;InbreedingCoeff=0.1914;MQ=61.63;MQ0=7;MQRankSum=2.315;QD=1.64;ReadPosRankSum=0.919;VQSLOD=1.5107;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:17,9:26:9.03:140,9,0	0/0:9,0:9:12.04:0,12,245	./.	0/0:24,0:17:0:0,0,0	0/1:22,7:28:16.22:128,0,16	0/0:28,0:26:29.77:0,30,494	0/0:17,0:20:23.55:0,24,449	0/0:24,0:24:18.06:0,18,325	0/0:17,0:17:17.73:0,18,328	0/0:24,0:24:21.07:0,21,405	0/0:28,0:28:15.05:0,15,284	0/0:13,0:13:9.03:0,9,157	0/0:24,0:24:12.58:0,13,279	0/0:13,0:13:8.86:0,9,155	0/0:17,0:18:15.26:0,15,240	0/1:16,0:16:20.85:21,0,437	0/0:24,0:23:3.68:0,4,612	0/0:15,0:16:33.10:0,33,630	0/0:15,0:14:12.04:0,12,259	0/1:32,1:33:16.61:17,0,494	0/1:26,0:25:29.38:29,0,189	0/0:19,0:19:14.99:0,15,224	0/0:19,0:19:18.04:0,18,322	0/0:28,0:35:47.63:0,48,981	0/0:20,0:20:20.89:0,21,338	0/0:26,0:26:24.08:0,24,456	0/0:23,0:23:21.54:0,22,462	0/0:22,0:22:6.02:0,6,123
chr10	68741818	.	CTT	C	5461.47	PASS	AB=0.708;AC=42;AF=0.750;AN=56;BaseQRankSum=-3.139;DP=574;FS=5.096;HRun=15;HaplotypeScore=83.0776;InbreedingCoeff=0.5798;MQ=67.27;MQ0=5;MQRankSum=1.049;QD=12.03;ReadPosRankSum=3.055;VQSLOD=4.2032;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:44,1:47:74.27:0,74,1117	1/1:1,7:9:17.70:144,18,0	0/0:12,0:8:3.90:0,4,41	0/1:16,0:15:24.21:24,0,110	0/0:24,0:24:38.10:0,38,404	1/1:1,12:14:23.85:254,24,0	1/1:9,18:31:22.50:340,23,0	1/1:6,18:29:35.21:425,35,0	1/1:2,15:17:32.88:281,33,0	1/1:8,12:22:29.24:279,29,0	0/1:6,7:14:9.04:101,0,9	1/1:4,7:11:5.78:97,6,0	1/1:3,9:13:23.70:197,24,0	1/1:6,9:15:17.77:211,18,0	1/1:7,14:20:41.85:370,42,0	1/1:8,12:20:32.88:289,33,0	1/1:6,19:28:15.51:344,16,0	1/1:8,23:31:53.75:475,54,0	1/1:9,4:14:5.76:96,6,0	0/1:11,1:27:5.73:6,0,172	0/1:6,11:17:16.72:161,0,17	1/1:9,8:21:17.02:217,17,0	0/0:11,0:12:20.56:0,21,253	0/0:23,0:21:47.34:0,47,536	1/1:6,15:23:29.02:310,29,0	1/1:5,16:23:35.33:391,35,0	1/1:5,9:16:23.10:182,23,0	1/1:4,10:15:26.58:267,27,0
chr10	68742122	.	TGTGTGTGTGA	T	598.39	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=7.617;DP=952;FS=0.842;HRun=0;HaplotypeScore=240.6549;InbreedingCoeff=0.1719;MQ=53.16;MQ0=44;MQRankSum=-2.926;QD=5.44;ReadPosRankSum=-1.652;VQSLOD=2.3492;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:67,0:65:99:0,128,5298	0/0:15,0:15:36.12:0,36,1204	0/0:67,0:8:11.80:0,12,139	0/0:67,0:11:2.44:0,2,23	0/0:34,0:32:63.20:0,63,2234	0/0:22,0:21:45.15:0,45,1652	0/0:23,0:22:51.17:0,51,1297	0/0:56,0:48:81.25:0,81,1626	0/0:21,0:21:39.13:0,39,1202	0/1:34,0:32:99:557,0,218	0/1:19,0:19:28.67:51,0,29	0/0:40,0:40:81.15:0,81,3190	0/0:23,0:23:54.17:0,54,1775	0/0:32,0:31:75.20:0,75,2808	0/0:30,0:28:69.24:0,69,2744	0/0:18,0:18:42.12:0,42,1297	0/0:30,0:29:64.46:0,64,2643	0/0:18,0:18:45.15:0,45,2154	0/0:22,0:18:30.10:0,30,1050	0/0:27,0:26:54.16:0,54,1528	0/0:102,0:97:99:0,193,6710	0/0:28,0:28:63.10:0,63,1719	1/1:4,13:17:2.30:36,2,0	0/0:47,0:47:99:0,102,3345	0/0:23,0:23:57.19:0,57,2059	0/1:40,0:38:66.15:66,0,2073	0/0:9,0:9:12.04:0,12,529	0/0:20,0:19:42.14:0,42,1410
chr10	68742132	.	AGTGTGTGTGAGT	A	1344.42	PASS	AB=0.853;AC=5;AF=0.089;AN=56;BaseQRankSum=7.653;DP=866;FS=1.777;HRun=0;HaplotypeScore=253.5229;InbreedingCoeff=0.2496;MQ=52.66;MQ0=36;MQRankSum=-2.282;QD=10.18;ReadPosRankSum=-0.080;VQSLOD=2.4170;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:60,0:60:99:0,133,5981	0/0:17,0:17:42.14:0,42,1736	0/0:41,0:4:6.02:0,6,79	0/1:51,0:7:5.98:6,0,69	0/0:31,0:29:60.20:0,60,2520	0/0:25,0:24:51.15:0,51,1957	0/0:22,0:21:48.15:0,48,1461	0/0:50,0:42:69.21:0,69,1821	0/0:17,0:17:33.07:0,33,1394	0/1:12,20:30:69.02:1172,0,69	1/1:5,11:16:6.36:138,6,0	0/0:36,0:36:78.16:0,78,3376	0/0:23,0:23:51.17:0,51,1944	0/0:32,0:31:75.26:0,75,3259	0/0:28,0:26:66.21:0,66,3256	0/0:20,0:20:39.13:0,39,1629	0/0:29,0:28:67.29:0,67,3000	0/0:17,0:17:48.16:0,48,2615	0/0:21,0:18:39.10:0,39,1480	0/0:26,0:25:48.15:0,48,2043	0/0:92,0:86:99:0,163,7440	0/0:28,0:28:63.01:0,63,2361	0/0:15,0:15:2.71:0,3,15	0/0:48,0:48:99:0,106,3969	0/0:26,0:26:63.22:0,63,2400	0/1:31,2:31:99:138,0,2575	0/0:11,0:10:18.06:0,18,678	0/0:19,0:17:36.12:0,36,1417
chr10	68742797	.	G	GC	23725.61	PASS	AB=1.000;AC=53;AF=0.946;AN=56;BaseQRankSum=0.752;DP=650;FS=1.788;HRun=0;HaplotypeScore=161.9909;InbreedingCoeff=0.6708;MQ=79.37;MQ0=0;MQRankSum=-7.047;QD=37.96;ReadPosRankSum=4.652;VQSLOD=4.1820;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,31:31:63.20:938,63,0	1/1:2,9:11:30.09:423,30,0	0/1:12,0:13:9.44:187,0,9	0/0:25,0:25:45.03:0,45,652	1/1:1,17:18:48.16:717,48,0	1/1:0,17:17:51.17:760,51,0	1/1:0,30:30:81.27:1211,81,0	1/1:1,19:20:60.18:852,60,0	1/1:2,18:20:54.16:769,54,0	1/1:0,23:23:66.14:919,66,0	1/1:0,13:13:33.11:470,33,0	1/1:0,39:39:99:1609,108,0	1/1:1,24:25:69.22:988,69,0	1/1:0,40:40:99:1624,111,0	1/1:2,21:23:60.13:860,60,0	1/1:0,19:19:54.18:802,54,0	1/1:1,35:36:96.31:1433,96,0	1/1:0,19:19:51.17:763,51,0	1/1:1,17:18:54.05:729,54,0	1/1:1,11:12:27.09:401,27,0	1/1:3,60:63:99:2299,157,0	1/1:0,13:13:36.12:538,36,0	1/1:2,10:13:27.09:397,27,0	1/1:0,29:29:54.42:808,54,0	1/1:0,18:18:51.17:763,51,0	1/1:1,33:34:99:1421,99,0	1/1:0,20:20:48.09:688,48,0	1/1:0,8:8:24.08:359,24,0
chr10	68743674	.	A	AC	1332.45	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-8.865;DP=591;FS=4.120;HRun=3;HaplotypeScore=58.0764;InbreedingCoeff=0.9916;MQ=79.01;MQ0=0;MQRankSum=-4.052;QD=34.17;ReadPosRankSum=1.834;VQSLOD=4.3264;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:84.24:0,84,993	0/0:9,0:9:27.08:0,27,323	0/0:12,0:12:36.04:0,36,384	0/0:16,0:16:32.44:0,32,339	0/0:16,0:16:48.12:0,48,551	0/0:12,0:12:36.11:0,36,431	0/0:28,0:28:84.14:0,84,977	0/0:15,0:15:45.13:0,45,531	0/0:22,0:22:66.18:0,66,769	0/0:22,0:22:60.18:0,60,718	0/0:11,0:11:30.09:0,30,360	0/0:19,0:19:54.16:0,54,644	0/0:24,0:24:60.15:0,60,704	0/0:18,0:18:42.13:0,42,503	0/0:12,0:12:33.10:0,33,395	0/0:18,0:18:51.16:0,51,609	0/0:49,0:49:99:0,132,1582	1/1:2,37:39:99:1427,102,0	0/0:18,0:18:51.10:0,51,582	0/0:15,0:15:39.12:0,39,466	0/0:37,0:37:99:0,108,1292	0/0:20,0:20:51.14:0,51,600	0/0:8,0:8:21.06:0,21,251	0/0:32,0:31:96.27:0,96,1120	0/0:20,0:20:57.17:0,57,673	0/0:31,0:31:80.09:0,80,992	0/0:30,0:29:84.25:0,84,997	0/0:8,0:8:24.07:0,24,288
chr10	68743970	.	TCA	T	311.42	PASS	AB=0.958;AC=17;AF=0.340;AN=50;BaseQRankSum=-1.021;DP=548;FS=22.316;HRun=0;HaplotypeScore=89.5515;InbreedingCoeff=-0.3219;MQ=63.67;MQ0=12;MQRankSum=-0.559;QD=1.02;ReadPosRankSum=-1.535;VQSLOD=0.0987;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:11.94:0,12,92	0/1:9,3:12:17.83:84,0,18	./.	./.	0/1:10,1:10:22.98:23,0,53	0/0:12,0:11:5.98:0,6,46	0/0:33,1:34:3.93:0,4,258	0/0:18,0:17:1.25:0,1,3	0/1:27,1:26:12.61:13,0,160	0/0:19,0:19:3:0,3,28	1/1:3,2:4:3.01:32,3,0	0/1:32,1:33:32.22:32,0,142	0/1:21,1:22:8.19:8,0,150	0/1:25,0:24:32.58:33,0,54	0/1:20,1:21:56.34:56,0,99	0/1:20,0:21:13.53:14,0,131	0/0:20,1:21:1.08:0,1,262	0/1:28,2:30:25.95:26,0,38	0/0:16,0:16:3:0,3,29	./.	0/1:42,0:41:47.25:47,0,84	1/1:16,0:16:5.99:54,6,0	0/0:7,0:7:3.01:0,3,44	0/0:28,0:27:27.04:0,27,351	0/0:9,0:9:0.90:0,1,106	0/1:12,0:12:8.62:9,0,67	0/1:18,0:17:3.21:3,0,144	0/1:8,0:8:13.71:14,0,27
chr10	68744564	.	TGGTGGAGC	T	15429.16	PASS	AC=42;AF=0.778;AN=54;BaseQRankSum=12.213;DP=496;FS=25.151;HRun=0;HaplotypeScore=140.2458;InbreedingCoeff=0.9180;MQ=62.57;MQ0=0;MQRankSum=-12.768;QD=40.60;ReadPosRankSum=2.433;VQSLOD=2.5750;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:78.27:0,78,3254	1/1:2,2:4:3.01:39,3,0	0/0:7,0:8:17.73:0,18,549	0/0:6,0:6:15.05:0,15,425	0/0:8,0:8:18.06:0,18,727	1/1:4,11:15:36.12:976,36,0	1/1:5,25:30:48.08:1177,48,0	1/1:9,5:14:18.01:286,18,0	1/1:4,19:23:36.12:932,36,0	1/1:5,12:17:36.11:920,36,0	1/1:0,4:4:5.98:101,6,0	1/1:7,23:30:66.23:1788,66,0	1/1:3,17:20:42.14:1092,42,0	1/1:2,17:19:30.10:781,30,0	1/1:2,8:10:15.05:407,15,0	1/1:2,13:15:33.11:895,33,0	1/1:8,23:31:47.67:1239,48,0	1/1:6,11:17:24.04:589,24,0	1/1:13,8:21:21.07:569,21,0	1/1:7,4:11:9.20:198,9,0	1/1:8,26:34:23.11:414,23,0	1/1:3,12:15:21.03:416,21,0	0/0:11,0:11:27.09:0,27,1143	0/0:47,0:47:99:0,132,4938	1/1:3,11:14:18.06:444,18,0	1/1:2,11:13:33.11:866,33,0	1/1:4,19:23:47.36:1300,47,0	./.
chr10	68746621	.	T	TGG	156.99	PASS	AB=0.965;AC=16;AF=0.286;AN=56;BaseQRankSum=-1.124;DP=406;FS=28.303;HRun=0;HaplotypeScore=86.3916;InbreedingCoeff=0.0369;MQ=47.47;MQ0=18;MQRankSum=-2.668;QD=0.91;ReadPosRankSum=-0.372;VQSLOD=-0.0496;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:35:88.17:0,88,1118	1/1:7,0:7:7.59:78,8,0	1/1:14,0:1:0.47:1,0,0	0/1:18,0:8:0.88:1,0,66	0/0:23,0:22:51.79:0,52,537	0/1:20,1:20:13.71:14,0,227	0/0:13,0:14:19.18:0,19,282	0/0:22,0:20:48.52:0,49,442	0/1:9,0:9:19.12:19,0,106	0/0:17,0:17:23.02:0,23,409	0/0:13,0:12:12.79:0,13,305	0/0:8,0:8:21.01:0,21,228	0/0:6,0:5:13.71:0,14,103	0/0:17,0:17:18.43:0,18,244	0/1:9,1:10:5.02:5,0,208	0/1:11,0:11:1.24:42,0,1	0/0:17,0:17:11.28:0,11,335	0/1:23,3:27:64.57:65,0,380	0/1:10,1:11:14.98:15,0,175	0/1:8,0:7:9.25:9,0,99	1/1:6,0:5:0.03:9,0,0	0/0:4,0:4:12:0,12,129	0/0:12,0:12:32.90:0,33,362	0/0:11,0:11:17.90:0,18,228	0/1:17,0:17:14.95:15,0,197	0/0:23,0:21:0.40:0,0,357	0/0:10,0:10:10.88:0,11,189	0/1:13,0:12:26.94:27,0,164
chr10	68746622	.	T	TGG	315.10	PASS	AB=0.907;AC=15;AF=0.268;AN=56;BaseQRankSum=-2.556;DP=399;FS=32.294;HRun=0;HaplotypeScore=82.9895;InbreedingCoeff=0.0223;MQ=46.97;MQ0=16;MQRankSum=-2.221;QD=2.06;ReadPosRankSum=-1.560;VQSLOD=-0.4238;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:35:83.32:0,83,1079	0/1:3,3:7:3.16:94,0,3	1/1:13,0:1:2.98:22,3,0	0/1:17,0:8:2.80:3,0,71	0/0:22,0:21:53.08:0,53,514	0/1:19,1:19:89.91:90,0,194	0/0:11,2:13:12.38:0,12,269	0/0:21,0:19:42.24:0,42,367	0/1:8,1:9:32.17:32,0,75	0/0:15,1:16:1.32:0,1,359	0/1:13,1:13:0.25:0,0,281	0/0:9,0:9:17.97:0,18,202	0/0:7,0:6:13.30:0,13,106	0/0:16,0:17:1.39:0,1,196	0/0:8,1:10:3.92:0,4,199	1/1:9,2:11:0.61:71,1,0	0/0:17,0:17:28.76:0,29,375	0/0:28,0:28:9.30:0,9,440	0/0:12,0:12:11.98:0,12,205	0/1:8,1:8:21.05:21,0,136	1/1:3,3:5:0.85:28,1,0	0/0:5,0:5:12.02:0,12,132	0/0:11,0:11:32.46:0,32,363	0/0:11,0:11:10.86:0,11,207	0/1:12,1:14:29.02:29,0,174	0/1:18,2:18:29.18:29,0,357	0/0:10,0:10:23.61:0,24,241	0/1:13,0:12:36.75:37,0,156
chr10	68747877	.	C	CAAAA	7790.53	PASS	AB=0.790;AC=44;AF=0.786;AN=56;BaseQRankSum=3.001;DP=487;FS=10.086;HRun=13;HaplotypeScore=110.5505;InbreedingCoeff=0.6061;MQ=65.21;MQ0=0;MQRankSum=-3.611;QD=19.38;ReadPosRankSum=-7.912;VQSLOD=0.1345;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:27:50.46:0,50,615	1/1:2,2:9:21.02:367,21,0	0/1:14,0:10:8.71:9,0,86	0/1:11,0:7:0:0,0,0	0/0:18,0:21:44.76:0,45,509	1/1:7,6:15:15.05:262,15,0	1/1:7,8:18:17.64:324,18,0	1/1:6,0:23:48.85:568,49,0	1/1:9,9:19:12.04:238,12,0	0/1:5,0:19:24.15:104,0,24	0/1:9,0:19:37.45:37,0,70	1/1:16,0:16:36.11:631,36,0	1/1:9,6:15:24.08:456,24,0	1/1:23,0:24:26.35:405,26,0	1/1:4,5:10:6.01:92,6,0	1/1:7,1:16:18.06:363,18,0	1/1:10,2:19:33.03:583,33,0	1/1:8,0:17:7.32:116,7,0	1/1:9,4:16:24.08:419,24,0	1/1:5,3:14:30.02:518,30,0	1/1:10,0:10:17.27:246,17,0	1/1:10,6:17:31.26:438,31,0	0/0:22,0:23:18.29:0,18,453	0/0:12,0:14:31.28:0,31,368	1/1:5,8:15:12.04:251,12,0	1/1:9,1:25:57.12:879,57,0	1/1:10,12:24:12.51:211,13,0	1/1:8,3:13:19.09:271,19,0
chr10	68747886	.	A	AAAAA	6231.99	PASS	AB=1.000;AC=43;AF=0.768;AN=56;BaseQRankSum=-0.983;DP=506;FS=3.539;HRun=8;HaplotypeScore=100.2537;InbreedingCoeff=0.5989;MQ=67.78;MQ0=0;MQRankSum=-2.329;QD=15.16;ReadPosRankSum=-7.509;VQSLOD=-0.5551;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:50.47:0,50,615	1/1:13,0:13:15:238,15,0	0/1:18,0:14:8.90:9,0,86	0/0:12,0:6:2.45:0,2,12	0/0:19,0:19:44.78:0,45,509	1/1:14,0:14:9.03:170,9,0	1/1:18,0:18:17.98:318,18,0	1/1:24,0:24:43.34:512,43,0	1/1:19,0:19:9.03:156,9,0	0/1:24,0:24:24.15:105,0,24	0/1:20,0:20:37.67:38,0,70	1/1:17,0:17:22.89:415,23,0	1/1:15,0:15:15.05:280,15,0	1/1:16,7:25:33.09:575,33,0	1/1:8,0:8:7.84:123,8,0	1/1:19,0:19:9.03:158,9,0	1/1:20,0:19:15.91:212,16,0	1/1:17,0:17:14.59:215,15,0	1/1:22,0:22:23.99:377,24,0	1/1:15,0:15:26.22:404,26,0	1/1:6,0:6:9.65:98,10,0	1/1:16,0:16:22.67:300,23,0	0/0:26,0:26:18.18:0,18,452	0/0:12,0:12:31.29:0,31,368	1/1:16,0:16:9.03:190,9,0	1/1:29,0:28:49.90:720,50,0	1/1:22,0:22:15.05:276,15,0	1/1:14,0:14:22.86:344,23,0
chr10	68748445	.	AG	A	19863.83	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=13.031;DP=773;FS=0.572;HRun=1;HaplotypeScore=73.7817;InbreedingCoeff=0.9999;MQ=82.74;MQ0=0;MQRankSum=-4.518;QD=38.87;ReadPosRankSum=3.136;VQSLOD=5.5252;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:63,0:63:99:0,190,3007	1/1:0,11:11:33.11:461,33,0	0/0:22,0:22:60.18:0,60,931	0/0:20,0:20:57.18:0,57,859	0/0:33,0:33:93.23:0,93,1451	1/1:0,30:30:90.30:1258,90,0	1/1:0,28:28:75.25:1049,75,0	1/1:0,35:35:99:1328,99,0	1/1:0,31:31:93.31:1300,93,0	0/0:22,0:22:66.22:0,66,1034	0/0:17,0:17:42.14:0,42,671	1/1:0,36:36:90.30:1259,90,0	1/1:0,26:26:78.26:1085,78,0	1/1:0,22:22:54.18:755,54,0	1/1:0,41:41:99:1594,114,0	1/1:0,20:20:57.19:797,57,0	1/1:0,25:25:72.24:1007,72,0	0/0:26,0:26:75.26:0,75,1191	1/1:0,25:25:75.22:998,75,0	1/1:0,25:25:72.24:1006,72,0	1/1:0,41:41:99:1510,108,0	1/1:0,20:20:54.09:730,54,0	0/0:30,0:30:90.23:0,90,1328	0/0:29,0:28:87.26:0,87,1339	1/1:0,18:18:51.17:713,51,0	1/1:1,29:30:39.31:1126,39,0	1/1:0,29:29:81.27:1132,81,0	1/1:0,18:18:54.18:755,54,0
chr10	68756990	.	ATC	A	7376.11	PASS	AB=0.917;AC=34;AF=0.607;AN=56;BaseQRankSum=-5.894;DP=718;FS=3.817;HRun=0;HaplotypeScore=102.4160;InbreedingCoeff=0.2499;MQ=75.10;MQ0=11;MQRankSum=-3.274;QD=14.35;ReadPosRankSum=5.043;VQSLOD=4.6343;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:77.50:0,78,862	1/1:9,0:9:23.94:192,24,0	0/0:44,0:30:63.40:0,63,655	0/0:44,0:27:62.15:0,62,616	0/0:24,0:24:56.46:0,56,573	0/1:19,0:19:5.89:264,0,6	0/1:5,26:31:32:66,0,32	1/1:36,0:36:99:890,102,0	1/1:25,0:25:14.58:366,15,0	1/1:0,26:26:71.71:600,72,0	1/1:16,1:17:5.22:201,5,0	0/1:26,0:26:60.73:296,0,61	1/1:17,1:18:16.54:307,17,0	0/1:21,4:23:18.80:370,0,19	0/1:33,1:34:14.65:486,0,15	1/1:19,0:19:9.28:235,9,0	0/1:25,0:23:49.47:228,0,49	1/1:24,1:25:27.83:397,28,0	1/1:20,0:20:48.77:417,49,0	0/1:22,0:22:2.91:282,0,3	1/1:37,0:37:41.72:473,42,0	0/1:20,1:21:17.64:305,0,18	0/0:12,0:12:30.01:0,30,330	0/0:41,0:38:90.02:0,90,1211	1/1:25,1:24:4.78:221,5,0	1/1:29,1:30:18.24:487,18,0	0/1:8,2:9:14.81:136,0,15	0/1:13,0:13:27.51:156,0,28
chr10	68757038	.	G	GTA	5076.47	PASS	AB=0.976;AC=26;AF=0.464;AN=56;BaseQRankSum=-7.540;DP=761;FS=15.106;HRun=0;HaplotypeScore=119.0833;InbreedingCoeff=-0.2897;MQ=49.27;MQ0=40;MQRankSum=3.259;QD=8.24;ReadPosRankSum=1.750;VQSLOD=3.5434;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:38:41.99:0,42,515	0/1:16,0:14:2.09:127,0,2	0/0:2,0:2:5.98:0,6,47	0/0:3,0:3:8.95:0,9,80	0/0:28,0:27:23.58:0,24,336	0/1:25,1:22:56.82:247,0,57	0/1:39,0:35:99:294,0,106	1/1:24,0:22:27:207,27,0	0/1:24,0:24:80.85:198,0,81	1/1:22,0:20:38.17:329,38,0	1/1:23,0:23:26.63:273,27,0	0/1:37,0:37:99:287,0,246	0/1:14,18:31:33.76:34,0,51	0/1:34,0:32:27.37:420,0,27	0/1:39,0:37:99:419,0,131	0/1:21,0:21:99:166,0,104	0/1:31,1:28:99:220,0,194	1/1:23,0:23:8.47:320,8,0	0/1:15,0:14:12.13:12,0,40	0/1:25,0:22:99:139,0,169	0/1:46,0:42:99:212,0,104	0/1:31,0:31:99:233,0,173	0/0:27,0:26:51.72:0,52,405	0/0:44,0:39:52.81:0,53,847	0/1:30,0:28:99:134,0,103	0/1:32,0:31:84.95:489,0,85	0/1:28,0:26:60.61:225,0,61	0/1:16,0:13:92.19:92,0,97
chr10	68757989	.	C	CCA	163.02	PASS	AB=0.904;AC=11;AF=0.220;AN=50;BaseQRankSum=-0.416;DP=389;FS=11.598;HRun=0;HaplotypeScore=87.3135;InbreedingCoeff=-0.1437;MQ=31.54;MQ0=35;MQRankSum=-1.397;QD=0.91;ReadPosRankSum=-1.147;VQSLOD=0.8253;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:10,0:10:12:0,12,132	./.	0/0:22,0:1:3.01:0,3,34	0/0:21,0:3:4.52:0,5,45	0/0:14,0:10:9.03:0,9,105	0/1:9,1:9:23.06:23,0,59	0/0:10,0:9:9.02:0,9,94	0/1:28,0:26:7.04:7,0,519	0/1:16,1:16:16.10:16,0,132	0/1:24,0:20:24.27:24,0,273	0/0:4,0:3:3.01:0,3,35	0/0:10,2:11:8.59:0,9,108	0/1:14,4:17:58.15:58,0,103	0/0:8,3:10:5.69:0,6,68	0/1:6,0:6:0:0,0,0	0/0:5,0:4:3.01:0,3,31	0/0:12,0:12:20.98:0,21,213	0/1:13,0:12:30.39:30,0,144	0/1:30,1:20:95.41:95,0,121	./.	0/0:26,0:17:9.02:0,9,105	0/1:6,5:10:0:0,0,0	0/0:13,1:13:6.02:0,6,74	0/0:15,0:15:18.01:0,18,201	0/1:10,1:9:0:0,0,0	0/0:23,1:17:16.88:0,17,195	0/1:5,3:6:27.95:28,0,28	./.
chr10	68758007	.	CAT	C	2734.09	PASS	AB=0.736;AC=36;AF=0.643;AN=56;BaseQRankSum=5.138;DP=460;FS=52.916;HRun=0;HaplotypeScore=97.1919;InbreedingCoeff=0.3136;MQ=33.74;MQ0=43;MQRankSum=-3.711;QD=8.21;ReadPosRankSum=1.771;VQSLOD=1.4183;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:29.89:0,30,459	1/1:1,2:4:2.66:22,3,0	0/0:30,0:4:12.04:0,12,207	0/0:37,0:13:7.76:0,8,286	0/1:13,2:11:22.72:23,0,237	1/1:3,5:11:14.01:109,14,0	1/1:3,8:10:11.98:100,12,0	0/1:13,16:30:53.81:435,0,54	1/1:8,9:17:31.69:260,32,0	0/1:14,9:21:89.92:254,0,90	0/0:4,4:6:3.01:0,3,57	1/1:6,7:12:17.89:157,18,0	1/1:9,9:18:1.77:197,2,0	1/1:3,7:14:17.80:156,18,0	1/1:3,5:8:17.77:127,18,0	1/1:1,4:4:9:78,9,0	1/1:6,10:16:27.02:252,27,0	1/1:6,4:12:26.59:200,27,0	0/1:23,5:17:0.81:148,0,1	1/1:6,0:4:2.99:24,3,0	0/1:24,7:21:17.63:117,0,18	0/1:5,8:11:0:0,0,0	0/0:16,1:17:21.07:0,21,396	0/0:19,0:19:35.84:0,36,644	1/1:7,3:10:2.98:27,3,0	0/1:16,7:16:81.34:147,0,81	0/1:4,4:6:0.05:45,0,0	1/1:3,0:2:3.01:30,3,0
chr10	68758011	.	CAT	C	2873.37	PASS	AB=0.717;AC=37;AF=0.661;AN=56;BaseQRankSum=5.871;DP=463;FS=47.870;HRun=0;HaplotypeScore=101.3924;InbreedingCoeff=0.4421;MQ=37.86;MQ0=39;MQRankSum=-4.546;QD=9.09;ReadPosRankSum=1.569;VQSLOD=1.3200;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:15:31.66:0,32,556	1/1:2,2:4:2.66:22,3,0	0/0:31,0:5:12.04:0,12,208	0/0:40,0:16:24.05:0,24,490	0/0:16,0:12:5.37:0,5,297	1/1:6,5:10:14:109,14,0	1/1:3,8:10:11.98:101,12,0	0/1:18,16:31:42.68:435,0,43	1/1:10,9:17:35.71:283,36,0	0/1:15,8:20:47.82:267,0,48	0/0:4,4:6:3.01:0,3,42	1/1:5,6:11:20.84:176,21,0	1/1:12,7:19:1.26:199,1,0	1/1:6,7:13:17.76:158,18,0	1/1:4,5:9:20.72:151,21,0	1/1:3,4:6:9.47:79,9,0	1/1:7,10:17:30:274,30,0	1/1:8,4:11:23.40:170,23,0	0/1:22,5:17:6.08:141,0,6	1/1:6,0:4:2.99:24,3,0	1/1:23,7:21:4.39:166,4,0	0/1:5,7:11:0:0,0,0	0/0:15,1:15:27.09:0,27,518	0/0:21,0:21:42.14:0,42,766	1/1:7,3:10:3:27,3,0	0/1:14,6:16:65.55:176,0,66	1/1:5,4:7:5.13:65,5,0	1/1:3,0:2:3.01:30,3,0
chr10	68758238	.	AC	A	12826.70	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=5.671;DP=655;FS=6.232;HRun=7;HaplotypeScore=69.3485;InbreedingCoeff=0.9880;MQ=90.60;MQ0=0;MQRankSum=-6.689;QD=25.60;ReadPosRankSum=1.930;VQSLOD=5.6980;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,123,1546	1/1:1,9:10:21.05:214,21,0	0/0:28,0:28:72.21:0,72,874	0/0:24,0:24:62.54:0,63,731	0/0:12,0:12:33.09:0,33,402	1/1:1,17:18:42.10:428,42,0	1/1:3,25:28:60.13:612,60,0	1/1:1,20:21:60.09:592,60,0	1/1:2,30:32:78.18:796,78,0	1/1:2,20:22:60.13:612,60,0	1/1:0,5:5:15.03:153,15,0	1/1:2,25:27:63.14:642,63,0	1/1:1,26:27:66.15:673,66,0	1/1:1,30:31:84.19:857,84,0	1/1:0,24:24:72.16:734,72,0	1/1:2,19:21:48.11:490,48,0	1/1:1,24:25:66.15:673,66,0	1/1:1,19:20:51.12:520,51,0	1/1:2,19:21:54.11:545,54,0	1/1:1,9:10:18.04:184,18,0	1/1:3,53:56:99:1439,141,0	1/1:1,15:16:39.09:398,39,0	0/0:15,0:15:36.10:0,36,431	0/0:29,0:29:87.27:0,87,1081	1/1:0,18:18:51.12:519,51,0	1/1:4,33:37:96.21:979,96,0	1/1:2,25:26:64.70:646,65,0	1/1:1,4:5:12.03:122,12,0
chr10	68764360	.	CA	C	852.35	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.727;DP=735;FS=6.207;HRun=2;HaplotypeScore=68.2239;InbreedingCoeff=0.9969;MQ=80.94;MQ0=0;MQRankSum=-1.318;QD=30.44;ReadPosRankSum=-0.247;VQSLOD=2.7741;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:60,0:60:99:0,181,2650	0/0:13,0:13:39.13:0,39,585	0/0:21,0:21:60.14:0,60,844	0/0:19,0:19:51.14:0,51,712	0/0:27,0:27:81.26:0,81,1194	0/0:30,0:30:87.27:0,87,1263	0/0:21,0:21:63.17:0,63,918	0/0:31,0:31:90.30:0,90,1348	0/0:25,0:25:75.25:0,75,1124	1/1:1,15:16:45.15:584,45,0	1/1:0,12:12:30.10:389,30,0	0/0:21,0:21:60.20:0,60,900	0/0:27,0:27:81.26:0,81,1188	0/0:30,0:30:90.29:0,90,1327	0/0:46,0:46:99:0,138,2068	0/0:30,0:30:90.30:0,90,1349	0/0:34,0:34:99:0,102,1527	0/0:15,0:15:45.15:0,45,675	0/0:27,0:27:78.26:0,78,1168	0/0:24,0:24:66.18:0,66,963	0/0:42,0:42:99:0,126,1884	0/0:19,0:19:57.18:0,57,835	0/0:14,0:14:42.13:0,42,610	0/0:39,0:39:99:0,108,1617	0/0:20,0:20:60.20:0,60,899	0/0:25,1:26:20.21:0,20,980	0/0:36,0:36:99:0,108,1617	0/0:10,0:10:30.08:0,30,429
chr10	68765246	.	CGACT	C	1400.96	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.782;DP=645;FS=9.809;HRun=0;HaplotypeScore=103.3891;InbreedingCoeff=0.9989;MQ=93.07;MQ0=0;MQRankSum=-2.641;QD=43.78;ReadPosRankSum=1.799;VQSLOD=3.8863;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:78.24:0,78,2097	0/0:11,0:11:33.11:0,33,922	0/0:30,0:30:78.13:0,78,1800	0/0:27,0:27:69.94:0,70,1713	0/0:22,0:22:63.13:0,63,1519	0/0:27,0:27:81.28:0,81,2204	0/0:26,0:26:78.21:0,78,1934	0/0:27,0:27:81.28:0,81,2161	0/0:20,0:20:57.18:0,57,1492	0/0:15,0:15:42.14:0,42,1175	0/0:13,0:13:39.13:0,39,1055	0/0:21,0:21:63.19:0,63,1644	0/0:21,0:21:63.19:0,63,1632	0/0:27,0:27:81.26:0,81,2188	0/0:30,0:30:90.30:0,90,2458	0/0:31,0:31:93.29:0,93,2479	0/0:30,0:30:90.29:0,90,2455	1/1:0,32:32:75.26:1496,75,0	0/0:13,0:13:36.11:0,36,920	0/0:20,0:20:60.19:0,60,1585	0/0:51,0:51:99:0,150,3952	0/0:17,0:17:51.16:0,51,1368	0/0:13,0:13:36.11:0,36,946	0/0:26,0:26:78.27:0,78,2154	0/0:16,0:16:48.15:0,48,1283	0/0:26,0:25:78.25:0,78,2121	0/0:17,0:17:51.18:0,51,1426	0/0:10,0:10:30.10:0,30,837
chr10	68766542	.	CTCTT	C	5437.30	PASS	AB=1.000;AC=44;AF=0.786;AN=56;BaseQRankSum=-3.944;DP=461;FS=0.000;HRun=0;HaplotypeScore=78.9649;InbreedingCoeff=0.6508;MQ=62.33;MQ0=21;MQRankSum=-0.471;QD=16.68;ReadPosRankSum=2.452;VQSLOD=4.1976;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:33.47:0,33,291	1/1:5,0:5:14.98:124,15,0	0/0:46,0:21:2.42:0,2,354	0/0:49,0:17:0.94:0,1,164	0/0:16,0:16:44.99:0,45,397	1/1:14,0:14:33.42:272,33,0	1/1:13,1:13:10.05:224,10,0	1/1:15,0:15:41.96:380,42,0	1/1:10,0:10:24.29:184,24,0	1/1:19,0:18:50.32:475,50,0	1/1:15,0:15:44.63:351,45,0	1/1:10,0:10:26.97:224,27,0	1/1:8,0:8:23.88:184,24,0	1/1:3,11:13:2.64:58,3,0	1/1:17,0:15:5.81:231,6,0	1/1:16,0:14:3.60:261,4,0	1/1:19,0:19:53.58:419,54,0	1/1:21,0:18:7.43:255,7,0	1/1:10,0:10:26.90:232,27,0	1/1:25,0:24:5.88:36,6,0	1/1:13,0:13:23.84:179,24,0	1/1:14,0:14:35.80:295,36,0	0/0:8,0:8:21.36:0,21,177	0/1:16,0:15:1.96:2,0,226	0/1:16,0:16:1.34:279,0,1	1/1:19,0:19:32.51:412,33,0	1/1:11,0:11:32.63:247,33,0	1/1:5,0:5:14.91:113,15,0
chr10	68766544	.	CTT	C	6015.72	PASS	AB=1.000;AC=43;AF=0.768;AN=56;BaseQRankSum=-4.014;DP=471;FS=7.224;HRun=4;HaplotypeScore=65.0974;InbreedingCoeff=0.7485;MQ=62.59;MQ0=17;MQRankSum=0.316;QD=19.41;ReadPosRankSum=3.099;VQSLOD=1.7778;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:39.47:0,39,343	1/1:7,0:7:20.97:174,21,0	0/0:47,0:22:4.71:0,5,383	0/0:52,0:18:3.31:0,3,177	0/0:16,0:16:47.99:0,48,424	1/1:14,0:14:38.94:321,39,0	1/1:15,0:14:15.70:242,16,0	1/1:17,0:17:47.99:436,48,0	1/1:10,0:10:26.56:207,27,0	1/1:19,0:18:51.04:476,51,0	1/1:15,0:15:44.63:351,45,0	1/1:11,0:11:32.96:274,33,0	1/1:8,0:8:23.88:184,24,0	1/1:12,0:12:2.64:26,3,0	1/1:14,0:14:38.83:314,39,0	1/1:15,0:14:35.95:296,36,0	1/1:19,0:19:56.76:443,57,0	0/1:19,0:17:17.78:246,0,18	1/1:10,0:10:26.93:232,27,0	1/1:2,23:24:5.88:36,6,0	1/1:14,0:14:26.84:204,27,0	1/1:15,0:15:41.95:357,42,0	0/0:9,0:9:24.36:0,24,204	0/0:19,0:17:4.02:0,4,272	1/1:16,0:16:28.62:330,29,0	1/1:19,0:19:56.97:506,57,0	1/1:11,0:11:32.63:247,33,0	1/1:5,0:5:14.91:113,15,0
chr10	68768107	.	AGTGTGTGTGTGTGT	A	8433.78	PASS	AC=36;AF=0.720;AN=50;BaseQRankSum=8.144;DP=546;FS=7.323;HRun=0;HaplotypeScore=210.7786;InbreedingCoeff=0.7538;MQ=64.59;MQ0=14;MQRankSum=-6.061;QD=24.66;ReadPosRankSum=1.714;VQSLOD=3.2610;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:36.11:0,36,1768	1/1:5,1:6:3.01:117,3,0	./.	./.	0/0:15,0:15:18.06:0,18,1189	1/1:12,7:20:18.06:663,18,0	1/1:20,2:22:6.02:234,6,0	0/0:13,0:13:9.03:0,9,356	1/1:15,8:23:27.09:1033,27,0	1/1:18,2:22:12.03:365,12,0	1/1:7,7:15:12.86:314,13,0	1/1:15,9:25:26.12:1032,26,0	1/1:11,7:19:21.07:800,21,0	1/1:18,3:19:3.01:117,3,0	1/1:15,9:25:21.07:800,21,0	1/1:12,4:16:12.04:468,12,0	1/1:24,1:29:8.53:486,9,0	0/0:15,0:16:21.02:0,21,535	1/1:13,1:14:0.50:113,1,0	1/1:6,7:13:9.03:273,9,0	./.	1/1:14,8:22:12.04:389,12,0	0/0:6,0:6:9.03:0,9,519	0/0:23,0:23:27.09:0,27,1602	1/1:10,3:13:9.03:332,9,0	1/1:8,6:14:15.02:334,15,0	1/1:15,5:21:14.67:565,15,0	0/0:5,0:4:1.55:0,2,4
chr10	68769793	.	GACACACACAC	G	731.40	PASS	AB=0.826;AC=33;AF=0.750;AN=44;BaseQRankSum=0.711;DP=517;FS=1.257;HRun=0;HaplotypeScore=136.3464;InbreedingCoeff=0.3343;MQ=67.08;MQ0=24;MQRankSum=1.993;QD=2.29;ReadPosRankSum=2.574;VQSLOD=2.6628;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:16:6.49:0,6,209	1/1:9,0:10:9.01:104,9,0	./.	./.	0/0:13,0:14:12.02:0,12,268	1/1:16,0:14:4.97:51,5,0	1/1:26,0:25:3.18:20,3,0	./.	1/1:14,0:14:3:25,3,0	1/1:19,0:18:6.39:53,6,0	0/1:10,0:13:0:0,0,0	./.	./.	1/1:17,0:17:2.69:24,3,0	1/1:9,7:15:2.61:87,3,0	1/1:13,0:12:9.01:104,9,0	1/1:19,6:23:0.20:1,0,0	0/1:6,0:12:19.90:24,0,20	0/1:12,0:11:21.24:21,0,97	1/1:18,0:17:2.99:26,3,0	1/1:43,0:41:6.48:79,6,0	1/1:14,0:14:5.99:74,6,0	0/0:13,0:13:21.53:0,22,725	0/0:28,0:27:15.05:0,15,541	1/1:11,0:10:5.99:51,6,0	1/1:23,0:20:0.34:36,0,0	1/1:11,4:16:3.01:88,3,0	./.
chr10	68773064	.	A	ACT	1093.63	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-8.133;DP=637;FS=0.798;HRun=0;HaplotypeScore=72.9406;InbreedingCoeff=0.9697;MQ=82.92;MQ0=1;MQRankSum=-2.531;QD=37.71;ReadPosRankSum=-3.184;VQSLOD=4.4408;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,120,1611	0/0:4,0:4:12.04:0,12,165	0/0:23,0:24:53.35:0,53,613	0/0:19,0:19:51.95:0,52,644	0/0:24,0:24:63.21:0,63,864	0/0:19,0:19:54.18:0,54,742	0/0:23,0:23:60.20:0,60,824	1/1:5,24:29:69.22:1188,69,0	0/0:22,0:22:66.22:0,66,907	0/0:22,0:22:57.19:0,57,779	0/0:22,0:22:63.21:0,63,866	0/0:25,0:25:69.23:0,69,944	0/0:25,0:25:69.23:0,69,947	0/0:18,0:18:54.18:0,54,742	0/0:23,0:23:66.22:0,66,907	0/0:22,0:22:57.19:0,57,783	0/0:35,0:35:99:0,99,1323	0/0:26,0:26:78.26:0,78,1072	0/0:23,0:23:69.22:0,69,924	0/0:14,0:14:36.12:0,36,494	0/0:25,0:24:63.21:0,63,866	0/0:16,0:16:45.11:0,45,570	0/0:16,0:16:48.16:0,48,659	0/0:33,0:33:84.28:0,84,1154	0/0:17,0:17:45.15:0,45,618	0/0:28,0:28:78.26:0,78,1071	0/0:23,0:23:66.22:0,66,907	0/0:13,0:13:30.08:0,30,395
chr10	68776997	.	CT	C	3462.74	PASS	AC=40;AF=0.769;AN=52;BaseQRankSum=0.089;DP=191;FS=4.303;HRun=1;HaplotypeScore=29.5632;InbreedingCoeff=0.8182;MQ=100.61;MQ0=0;MQRankSum=-2.770;QD=29.10;ReadPosRankSum=2.371;VQSLOD=3.3547;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:30.03:0,30,420	./.	0/0:15,0:13:29.24:0,29,395	0/0:19,0:18:28.55:0,29,412	0/0:9,0:9:27.08:0,27,383	1/1:0,7:7:15.05:206,15,0	1/1:0,14:14:21.07:289,21,0	1/1:7,1:8:17.98:168,18,0	1/1:0,5:5:12.04:163,12,0	1/1:0,9:9:27.08:352,27,0	1/1:0,4:4:12.04:166,12,0	1/1:2,6:8:18.06:248,18,0	1/1:0,6:6:9.03:124,9,0	1/1:0,3:3:6.02:84,6,0	1/1:0,5:5:12.04:164,12,0	1/1:0,7:7:18.06:245,18,0	1/1:3,3:6:12.03:150,12,0	1/1:0,3:3:6.02:82,6,0	1/1:0,4:4:12.04:161,12,0	1/1:0,5:5:12:133,12,0	1/1:0,12:12:20.96:290,21,0	1/1:1,0:1:3:27,3,0	0/0:3,0:3:9.03:0,9,135	0/0:14,0:14:33.01:0,33,445	1/1:0,3:3:6.02:81,6,0	1/1:0,6:6:18.06:248,18,0	1/1:0,3:3:6.02:80,6,0	./.
chr10	68778425	.	T	TG	889.91	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-5.497;DP=726;FS=0.000;HRun=4;HaplotypeScore=147.2522;InbreedingCoeff=0.9380;MQ=89.57;MQ0=0;MQRankSum=-4.060;QD=32.96;ReadPosRankSum=0.563;VQSLOD=1.8521;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:41:99:0,102,1156	0/0:8,0:8:18.05:0,18,203	0/0:29,0:31:89.19:0,89,957	0/0:36,0:36:99:0,102,1132	0/0:28,0:28:81.22:0,81,908	0/0:20,0:20:60.16:0,60,671	0/0:32,0:32:90.24:0,90,1011	0/0:38,0:38:99:0,105,1181	0/0:26,0:26:75.17:0,75,819	0/0:29,0:29:75.21:0,75,851	0/0:21,0:21:60.17:0,60,681	0/0:37,0:36:96.27:0,96,1088	0/0:17,0:17:45.13:0,45,510	0/0:26,0:26:69.20:0,69,782	0/0:25,0:25:66.16:0,66,735	0/0:22,0:22:60.17:0,60,681	0/0:22,0:22:63.18:0,63,714	1/1:2,25:27:72.24:985,72,0	0/0:27,0:27:69.17:0,69,770	0/0:23,0:23:57.16:0,57,647	0/0:45,0:45:99:0,129,1448	0/0:19,0:19:54.15:0,54,613	0/0:20,0:20:54.14:0,54,603	0/0:35,0:35:99:0,102,1157	0/0:13,0:13:39.11:0,39,442	0/0:30,0:30:84.24:0,84,953	0/0:24,0:22:69.20:0,69,783	0/0:3,0:3:9.03:0,9,102
chr10	68778523	.	TA	T	15404.87	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=10.994;DP=651;FS=20.238;HRun=1;HaplotypeScore=74.1317;InbreedingCoeff=0.9801;MQ=88.64;MQ0=0;MQRankSum=-4.195;QD=35.25;ReadPosRankSum=2.271;VQSLOD=3.1741;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,111,1731	1/1:0,8:8:21.07:294,21,0	0/0:27,0:27:80.89:0,81,1094	0/0:21,0:21:59.73:0,60,823	0/0:21,0:21:63.20:0,63,976	1/1:0,20:20:54.01:705,54,0	1/1:0,36:36:90.30:1257,90,0	1/1:0,29:28:84.24:1121,84,0	1/1:0,21:21:57.19:797,57,0	1/1:0,0:19:47.76:232,48,0	1/1:0,0:15:39.12:180,39,0	0/0:21,0:21:63.19:0,63,959	1/1:0,15:15:39.13:545,39,0	1/1:1,19:20:9.28:707,9,0	1/1:0,24:25:62.95:851,63,0	1/1:0,21:21:48.16:671,48,0	1/1:0,37:37:99:1383,99,0	0/0:23,0:23:66.21:0,66,1029	1/1:0,14:14:42.12:568,42,0	1/1:1,20:21:12.23:721,12,0	1/1:0,39:39:99:1508,108,0	1/1:0,21:21:63.21:880,63,0	0/0:25,0:25:66.22:0,66,1044	0/0:35,0:35:99:0,105,1647	1/1:0,24:24:66.22:922,66,0	1/1:1,25:26:74.99:1016,75,0	1/1:0,21:21:63.21:880,63,0	1/1:0,5:5:12.04:168,12,0
chr10	68780619	.	GC	G	2660.78	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=1.448;DP=674;FS=0.883;HRun=5;HaplotypeScore=96.9737;InbreedingCoeff=0.9977;MQ=89.09;MQ0=0;MQRankSum=-0.780;QD=28.92;ReadPosRankSum=1.579;VQSLOD=3.7615;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:87.29:0,87,1189	0/0:6,0:6:18.06:0,18,246	0/0:21,0:21:60.20:0,60,811	0/0:32,0:32:66.96:0,67,1031	0/0:28,0:28:84.27:0,84,1132	0/0:32,0:32:87.25:0,87,1168	0/0:16,0:16:42.14:0,42,574	0/0:31,0:31:93.27:0,93,1251	0/0:23,0:23:69.23:0,69,943	1/1:1,26:27:75.21:851,75,0	1/1:1,20:21:57.16:644,57,0	0/0:32,0:32:96.18:0,96,1233	0/0:30,0:30:87.27:0,87,1172	0/0:24,0:24:66.18:0,66,880	1/1:1,27:28:72.20:816,72,0	0/0:29,0:29:87.23:0,87,1152	1/1:0,16:16:45.13:510,45,0	0/0:12,0:12:36.12:0,36,490	0/0:20,0:20:57.15:0,57,733	0/0:37,0:37:99:0,108,1477	0/0:32,0:32:87.28:0,87,1174	0/0:30,0:30:84.24:0,84,1100	0/0:21,0:21:57.19:0,57,779	0/0:18,0:18:54.18:0,54,739	0/0:19,0:19:57.17:0,57,761	0/0:25,0:25:69.23:0,69,944	0/0:22,0:22:66.22:0,66,902	0/0:12,0:12:36.12:0,36,492
chr10	68780741	.	AAGCTCCTGATCCCAACAT	A	35537.98	PASS	AB=1.000;AC=41;AF=0.759;AN=54;BaseQRankSum=16.267;DP=578;FS=1.703;HRun=0;HaplotypeScore=311.9192;InbreedingCoeff=0.8604;MQ=81.23;MQ0=0;MQRankSum=-15.380;QD=84.61;ReadPosRankSum=5.053;VQSLOD=3.5832;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:78.26:0,78,6137	1/1:4,3:7:6.02:306,6,0	0/0:27,0:27:72.25:0,72,4533	0/0:16,0:16:45.15:0,45,2371	0/0:20,0:20:60.21:0,60,4816	1/1:8,21:29:54.19:2754,54,0	1/1:10,12:22:21.07:1064,21,0	0/1:30,0:30:99:1130,0,263	1/1:5,11:16:27.09:1377,27,0	1/1:4,16:20:48.16:2365,48,0	1/1:5,14:19:33.03:1417,33,0	1/1:4,17:21:42.14:2142,42,0	1/1:12,10:23:24.08:1224,24,0	1/1:5,14:19:30.10:1527,30,0	1/1:5,27:32:63.22:3213,63,0	1/1:5,19:24:42.14:2141,42,0	1/1:7,9:16:12.04:540,12,0	1/1:4,6:10:12.04:611,12,0	1/1:2,6:8:18.06:810,18,0	1/1:4,19:23:57.17:2776,57,0	1/1:6,8:14:12.04:527,12,0	1/1:2,19:21:54.19:2748,54,0	0/0:32,0:32:93.31:0,93,7576	0/0:33,0:33:72.25:0,72,6003	1/1:7,13:20:39.13:1989,39,0	1/1:8,19:27:57.19:2584,57,0	1/1:3,16:19:45.15:2293,45,0	./.
chr10	68780746	.	CCTGATCCCAACATAG	C	25319.07	PASS	AB=1.000;AC=41;AF=0.759;AN=54;BaseQRankSum=16.612;DP=465;FS=3.306;HRun=0;HaplotypeScore=268.6316;InbreedingCoeff=0.8557;MQ=90.06;MQ0=0;MQRankSum=-16.029;QD=82.47;ReadPosRankSum=5.704;VQSLOD=4.2252;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:78.25:0,78,5429	1/1:3,0:3:6.02:206,6,0	0/0:29,0:29:75.23:0,75,4657	0/0:17,0:17:41.30:0,41,2100	0/0:26,0:26:75.26:0,75,5415	1/1:21,0:21:54.19:1856,54,0	1/1:12,0:12:21.07:715,21,0	1/1:8,19:27:57.17:2453,57,0	1/1:11,0:11:27.09:928,27,0	1/1:16,0:16:48.12:1566,48,0	0/1:14,0:14:58.71:892,0,59	1/1:17,0:17:42.14:1443,42,0	1/1:11,0:11:24.08:827,24,0	1/1:14,0:14:30.10:1028,30,0	1/1:27,0:27:63.22:2165,63,0	1/1:19,0:19:42.14:1442,42,0	1/1:9,0:9:12.04:340,12,0	1/1:6,0:6:12.04:411,12,0	1/1:6,0:6:11.54:510,12,0	1/1:19,0:19:29.70:1828,30,0	1/1:8,0:8:12.04:328,12,0	1/1:19,0:19:54.19:1850,54,0	0/0:32,0:32:93.32:0,93,6700	0/0:27,0:27:75.26:0,75,5379	1/1:13,0:13:39.13:1340,39,0	1/1:19,0:19:46.66:1647,47,0	1/1:16,0:16:45.15:1545,45,0	./.
chr10	68781884	.	AACCAG	A	9487.22	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=12.802;DP=726;FS=0.778;HRun=0;HaplotypeScore=193.6637;InbreedingCoeff=0.9279;MQ=71.44;MQ0=1;MQRankSum=-9.070;QD=21.04;ReadPosRankSum=5.978;VQSLOD=4.3195;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:84.27:0,84,1975	1/1:5,4:9:9.03:146,9,0	0/0:42,0:33:44.24:0,44,872	0/0:61,0:49:40.05:0,40,840	0/0:34,0:34:90.19:0,90,1806	1/1:2,14:16:24.04:394,24,0	1/1:7,19:26:18.06:320,18,0	0/0:38,0:37:57.17:0,57,1032	1/1:2,12:14:21.07:396,21,0	1/1:8,23:31:53.96:782,54,0	1/1:0,17:17:38.94:516,39,0	1/1:6,20:26:26.98:488,27,0	1/1:4,20:24:39.10:663,39,0	1/1:4,25:29:38.70:666,39,0	1/1:12,27:39:39.13:738,39,0	1/1:5,25:30:36.09:640,36,0	1/1:4,16:20:15.05:284,15,0	1/1:9,9:18:6.02:114,6,0	1/1:4,11:15:33.05:429,33,0	1/1:7,17:24:38.85:443,39,0	1/1:8,8:15:6.02:65,6,0	1/1:2,20:22:50.99:679,51,0	0/0:23,0:23:57.16:0,57,1124	0/0:43,0:43:96.28:0,96,2332	1/1:5,11:16:21.02:309,21,0	1/1:8,20:28:57.13:911,57,0	1/1:10,18:28:24.01:391,24,0	1/1:0,3:3:6.02:114,6,0
chr10	68783182	.	C	CTTTAT	2300.80	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-6.391;DP=762;FS=1.651;HRun=0;HaplotypeScore=137.2792;InbreedingCoeff=0.9999;MQ=86.24;MQ0=0;MQRankSum=-4.803;QD=85.21;ReadPosRankSum=2.877;VQSLOD=5.8774;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:42:99:0,129,2803	0/0:15,0:15:45.14:0,45,999	0/0:36,0:36:99:0,105,2242	0/0:21,0:21:57.17:0,57,1198	0/0:20,0:20:54.15:0,54,1103	0/0:18,0:18:54.17:0,54,1195	0/0:17,0:17:48.16:0,48,1118	0/0:34,0:34:99:0,102,2245	0/0:30,0:30:87.28:0,87,1956	0/0:42,0:42:99:0,120,2592	0/0:18,0:18:51.17:0,51,1168	0/0:35,0:35:99:0,102,2182	0/0:31,0:31:93.29:0,93,2071	0/0:22,0:22:66.22:0,66,1470	0/0:31,0:31:93.32:0,93,2167	0/0:32,0:32:96.32:0,96,2190	0/0:28,0:28:84.29:0,84,1931	1/1:2,24:27:72.25:2396,72,0	0/0:15,0:15:45.15:0,45,1040	0/0:20,0:20:57.18:0,57,1277	0/0:41,0:41:99:0,120,2544	0/0:36,0:36:99:0,102,2244	0/0:24,0:24:72.25:0,72,1632	0/0:32,0:32:93.24:0,93,1983	0/0:25,0:25:75.23:0,75,1636	0/0:25,0:25:69.24:0,69,1572	0/0:20,0:20:60.16:0,60,1329	0/0:24,0:24:69.22:0,69,1533
chr10	68783843	.	GAC	G	2668.41	PASS	AB=0.938;AC=8;AF=0.143;AN=56;BaseQRankSum=11.066;DP=840;FS=8.390;HRun=0;HaplotypeScore=112.4624;InbreedingCoeff=0.6352;MQ=61.80;MQ0=15;MQRankSum=1.012;QD=15.70;ReadPosRankSum=-0.934;VQSLOD=3.0925;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:5.76:0,6,1047	0/0:6,0:6:18.03:0,18,240	0/0:33,0:20:14.67:0,15,169	0/0:40,0:26:8.33:0,8,162	0/0:26,0:23:51.17:0,51,830	0/0:29,0:29:75.25:0,75,1215	0/0:28,0:28:62.87:0,63,964	1/1:12,30:39:85.92:957,86,0	0/0:30,0:30:80.30:0,80,1265	1/1:6,31:35:92.99:1106,93,0	1/1:7,25:32:57.18:713,57,0	0/0:39,0:39:99:0,99,1616	0/0:24,0:24:63.19:0,63,990	0/0:27,0:27:54.16:0,54,851	0/0:38,2:40:42.35:0,42,1692	0/0:36,0:34:90.29:0,90,1439	0/0:30,0:30:72.20:0,72,1095	0/1:26,1:27:17.87:18,0,681	0/0:16,1:16:3.91:0,4,485	0/0:28,0:28:69.16:0,69,1042	0/0:67,1:67:69.46:0,69,2159	0/0:23,2:25:19.67:0,20,817	0/0:21,0:21:48.16:0,48,778	0/0:31,0:31:69.16:0,69,1033	0/0:16,0:15:43.39:0,43,689	0/1:28,3:31:27.66:28,0,1120	0/0:27,0:26:71.60:0,72,1101	0/0:16,0:16:22.22:0,22,526
chr10	68786405	.	TAG	T	804.63	PASS	AB=0.922;AC=29;AF=0.580;AN=50;BaseQRankSum=3.890;DP=597;FS=10.216;HRun=0;HaplotypeScore=78.9720;InbreedingCoeff=0.3295;MQ=69.14;MQ0=4;MQRankSum=2.890;QD=2.31;ReadPosRankSum=2.978;VQSLOD=0.8151;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:8.63:0,9,128	1/1:8,0:8:3:32,3,0	./.	./.	1/1:12,0:12:2.37:8,2,0	1/1:16,1:18:8.85:75,9,0	1/1:25,3:28:14.62:147,15,0	0/0:26,0:26:13.28:0,13,151	1/1:19,2:20:13.65:110,14,0	0/0:18,0:18:8.99:0,9,107	0/0:22,0:20:8.68:0,9,77	1/1:20,0:20:2.99:24,3,0	0/1:21,1:22:22.32:49,0,22	1/1:22,4:26:5.97:63,6,0	1/1:14,3:18:3.60:71,4,0	1/1:19,6:25:11.81:127,12,0	0/1:16,12:29:29.47:96,0,29	0/0:23,0:23:13.83:0,14,159	./.	0/0:15,0:15:0:0,0,0	0/1:26,1:27:22.96:23,0,32	0/1:24,0:24:8.13:8,0,18	0/0:14,0:14:3:0,3,25	0/0:27,0:28:20.81:0,21,235	1/1:17,3:20:3.01:32,3,0	1/1:24,0:24:7.56:60,8,0	1/1:23,0:23:3.47:33,3,0	0/1:4,0:4:6.25:6,0,11
chr10	68787099	.	AG	A	1263.32	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.788;DP=710;FS=0.000;HRun=3;HaplotypeScore=67.7626;InbreedingCoeff=0.9998;MQ=89.02;MQ0=0;MQRankSum=-0.783;QD=33.25;ReadPosRankSum=-0.277;VQSLOD=3.7362;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,111,1597	0/0:16,0:16:48.16:0,48,691	0/0:24,0:24:46.18:0,46,814	0/0:28,0:28:71.73:0,72,986	0/0:12,0:12:36.10:0,36,497	0/0:20,0:19:60.20:0,60,863	0/0:31,0:31:84.28:0,84,1208	0/0:25,0:25:72.24:0,72,1020	0/0:25,0:25:69.22:0,69,977	1/1:1,22:23:69.01:831,69,0	1/1:0,15:15:45.14:554,45,0	0/0:33,0:33:96.31:0,96,1366	0/0:34,0:34:93.31:0,93,1338	0/0:29,0:29:81.26:0,81,1146	0/0:19,0:19:57.19:0,57,821	0/0:21,0:21:60.20:0,60,863	0/0:36,0:36:99:0,105,1472	0/0:17,0:17:45.15:0,45,645	0/0:19,0:19:51.17:0,51,731	0/0:26,0:26:75.25:0,75,1080	0/0:46,0:46:99:0,120,1666	0/0:26,0:26:78.24:0,78,1086	0/0:24,0:24:66.22:0,66,949	0/0:31,0:31:93.30:0,93,1318	0/0:22,0:22:66.22:0,66,948	0/0:28,0:28:84.27:0,84,1193	0/0:31,0:31:93.31:0,93,1339	0/0:12,0:12:36.12:0,36,518
chr10	68788405	.	TG	T	2600.73	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=10.218;DP=702;FS=0.419;HRun=6;HaplotypeScore=67.2670;InbreedingCoeff=0.9997;MQ=78.22;MQ0=1;MQRankSum=-0.061;QD=27.09;ReadPosRankSum=-2.004;VQSLOD=3.2022;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:72.22:0,72,930	0/0:11,0:11:33.09:0,33,418	0/0:14,0:14:36.11:0,36,448	0/0:24,0:26:51.44:0,51,710	0/0:36,0:36:93.30:0,93,1221	0/0:19,0:19:54.15:0,54,693	0/0:25,0:25:69.22:0,69,906	1/1:1,32:33:93.21:988,93,0	0/0:29,0:29:87.27:0,87,1122	1/1:1,28:29:81.20:870,81,0	1/1:0,16:16:42.11:451,42,0	0/0:31,0:31:84.25:0,84,1086	0/0:25,0:25:60.19:0,60,784	0/0:13,0:13:33.10:0,33,420	0/0:21,0:21:63.19:0,63,803	0/0:25,0:25:72.23:0,72,947	0/0:37,0:36:99:0,102,1324	1/1:3,15:18:42.11:451,42,0	0/0:14,0:14:42.14:0,42,548	0/0:17,0:17:51.17:0,51,669	0/0:56,0:56:99:0,156,2035	0/0:23,0:23:63.19:0,63,804	0/0:17,0:17:39.13:0,39,512	0/0:26,0:26:78.20:0,78,992	0/0:35,0:35:96.30:0,96,1247	0/0:34,1:35:55.02:0,55,1057	0/0:33,0:33:90.27:0,90,1148	0/0:12,0:12:36.12:0,36,467
chr10	68788634	.	C	CT	3461.37	PASS	AB=0.909;AC=9;AF=0.161;AN=56;BaseQRankSum=8.747;DP=616;FS=0.435;HRun=1;HaplotypeScore=73.5795;InbreedingCoeff=0.8637;MQ=80.44;MQ0=0;MQRankSum=-1.973;QD=33.94;ReadPosRankSum=-1.905;VQSLOD=2.9221;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,117,1518	0/0:5,0:5:15.05:0,15,195	0/0:17,0:17:42.13:0,42,535	0/0:18,0:18:44.73:0,45,543	0/0:12,0:12:33.11:0,33,428	0/0:17,0:17:45.15:0,45,584	0/0:28,0:28:78.25:0,78,1012	1/1:1,26:27:78.25:1149,78,0	0/0:20,0:20:54.18:0,54,700	1/1:1,10:11:33.07:469,33,0	1/1:1,13:14:39.09:559,39,0	0/0:31,0:31:90.27:0,90,1140	0/0:26,0:26:72.23:0,72,934	0/0:21,0:21:63.20:0,63,818	0/0:25,0:25:75.24:0,75,974	0/0:23,0:23:69.22:0,69,896	0/0:33,0:33:99:0,99,1286	1/1:4,26:30:84.28:1254,84,0	0/0:19,0:19:54.17:0,54,700	0/0:14,0:14:39.13:0,39,506	0/0:40,0:40:99:0,120,1557	0/0:17,0:17:51.15:0,51,647	0/0:12,0:12:36.12:0,36,467	0/0:35,0:35:99:0,105,1363	0/0:21,0:21:60.18:0,60,765	0/1:18,2:20:29.77:30,0,641	0/0:30,0:30:90.28:0,90,1154	0/0:9,0:9:27.09:0,27,348
chr10	68788712	.	AT	A	1622.04	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=11.191;DP=605;FS=8.257;HRun=8;HaplotypeScore=61.4136;InbreedingCoeff=0.9959;MQ=73.17;MQ0=0;MQRankSum=-3.105;QD=22.22;ReadPosRankSum=-0.676;VQSLOD=3.5624;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:84.25:0,84,1003	0/0:11,0:11:30.08:0,30,352	0/0:15,0:14:21.06:0,21,253	0/0:6,0:6:18.02:0,18,203	0/0:30,2:32:32.31:0,32,945	0/0:16,0:16:48.15:0,48,580	0/0:17,0:17:42.11:0,42,486	1/1:4,15:19:45.03:426,45,0	0/0:24,0:24:69.21:0,69,834	1/1:0,22:22:63.08:604,63,0	1/1:1,14:15:39.06:377,39,0	0/0:26,0:26:75.23:0,75,906	0/0:22,0:22:63.18:0,63,748	0/0:19,0:19:45.12:0,45,522	0/0:22,0:22:57.17:0,57,689	0/0:24,0:24:63.18:0,63,750	0/0:23,0:23:57.17:0,57,689	1/1:3,14:17:39.05:376,39,0	0/0:23,0:23:36.08:0,36,420	0/0:30,1:31:64.36:0,64,1056	0/0:23,0:23:66.17:0,66,773	0/0:27,0:27:75.22:0,75,890	0/0:17,0:17:42.13:0,42,507	0/0:26,0:26:69.21:0,69,831	0/0:21,0:21:57.17:0,57,688	0/0:31,2:33:32.31:0,32,947	0/0:35,0:35:99:0,105,1207	0/0:9,0:9:27.07:0,27,315
chr10	68788799	.	T	TTC	1285.31	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=8.876;DP=652;FS=5.024;HRun=0;HaplotypeScore=118.4401;InbreedingCoeff=0.9965;MQ=78.49;MQ0=0;MQRankSum=-5.820;QD=13.97;ReadPosRankSum=-4.149;VQSLOD=2.6384;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:66.18:0,66,812	0/0:9,0:9:27.08:0,27,332	0/0:19,0:17:23.43:0,23,246	0/0:29,0:27:42.25:0,42,575	0/0:32,0:32:78.24:0,78,979	0/0:10,0:10:24.07:0,24,291	0/0:15,0:15:39.10:0,39,469	1/1:20,1:20:24.12:240,24,0	0/0:15,0:15:33.09:0,33,397	1/1:23,2:25:54.24:528,54,0	1/1:29,3:32:49.88:529,50,0	0/0:30,0:30:69.22:0,69,876	0/0:21,0:21:60.12:0,60,728	0/0:25,0:25:60.16:0,60,727	0/0:23,0:23:63.19:0,63,778	0/0:23,0:23:60.16:0,60,719	0/0:31,0:31:87.28:0,87,1106	1/1:14,0:14:21.36:149,21,0	0/0:20,0:20:42.12:0,42,521	0/0:16,0:16:48.14:0,48,598	0/0:20,0:20:42.11:0,42,499	0/0:26,0:26:60.18:0,60,751	0/0:24,0:24:69.22:0,69,878	0/0:25,0:25:69.17:0,69,847	0/0:34,0:34:93.28:0,93,1162	0/0:30,0:30:72.21:0,72,894	0/0:41,0:40:93.26:0,93,1145	0/0:16,0:16:27.09:0,27,344
chr10	68789778	.	TG	T	2820.53	PASS	AB=0.813;AC=50;AF=0.893;AN=56;BaseQRankSum=-1.575;DP=440;FS=1.384;HRun=12;HaplotypeScore=70.1147;InbreedingCoeff=0.3737;MQ=71.46;MQ0=0;MQRankSum=3.245;QD=6.88;ReadPosRankSum=3.547;VQSLOD=2.3370;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:12,10:26:26.04:163,26,0	1/1:5,5:10:2.57:23,3,0	0/0:17,0:15:10.58:0,11,95	0/1:12,0:8:2.06:21,0,2	1/1:13,6:20:7.96:52,8,0	1/1:8,10:19:22.94:168,23,0	1/1:6,13:20:34.86:261,35,0	1/1:8,0:18:19.06:55,19,0	0/1:6,8:15:7.48:122,0,7	1/1:0,0:11:20.84:60,21,0	1/1:4,0:13:14.71:42,15,0	1/1:8,3:14:18.06:110,18,0	1/1:6,10:20:21.04:134,21,0	1/1:12,6:18:17.90:139,18,0	1/1:4,8:13:25.93:192,26,0	1/1:5,9:15:23.91:186,24,0	1/1:8,12:24:43.04:285,43,0	1/1:4,0:22:32.52:94,33,0	1/1:8,1:10:8:52,8,0	1/1:7,4:15:18.06:111,18,0	1/1:16,17:34:21.71:265,22,0	1/1:8,1:9:8.76:57,9,0	0/0:13,0:13:0:0,0,0	1/1:8,2:10:2.96:23,3,0	1/1:2,8:11:16.97:122,17,0	1/1:9,4:16:15.05:87,15,0	1/1:4,6:11:13.99:99,14,0	1/1:2,0:3:2.02:6,2,0
chr10	68791426	.	CAGT	C	1106.31	PASS	AB=0.610;AC=3;AF=0.054;AN=56;BaseQRankSum=1.062;DP=690;FS=3.572;HRun=0;HaplotypeScore=150.4076;InbreedingCoeff=0.8142;MQ=85.65;MQ0=0;MQRankSum=-6.900;QD=24.05;ReadPosRankSum=0.487;VQSLOD=3.5819;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:84.29:0,84,1859	0/0:13,0:13:36.12:0,36,829	0/0:27,0:27:75.25:0,75,1643	0/0:21,0:21:51.17:0,51,1114	0/0:32,0:32:93.32:0,93,2144	0/0:28,0:28:78.27:0,78,1679	0/0:14,0:14:42.14:0,42,899	0/0:39,0:39:99:0,114,2560	0/0:25,0:25:72.25:0,72,1698	1/1:9,12:21:47.13:671,47,0	0/1:9,16:25:1.65:541,0,2	0/0:21,0:21:63.22:0,63,1446	0/0:25,0:25:75.26:0,75,1635	0/0:18,0:18:48.16:0,48,1088	0/0:22,0:22:63.22:0,63,1466	0/0:29,0:29:75.26:0,75,1726	0/0:23,0:23:66.23:0,66,1537	0/0:14,0:14:39.10:0,39,872	0/0:25,0:25:75.26:0,75,1726	0/0:28,0:28:81.28:0,81,1827	0/0:29,0:29:81.28:0,81,1866	0/0:27,0:27:81.28:0,81,1802	0/0:24,0:24:69.22:0,69,1555	0/0:17,0:17:51.16:0,51,1087	0/0:22,0:21:63.22:0,63,1446	0/0:35,0:35:99:0,105,2441	0/0:39,0:37:99:0,117,2616	0/0:18,0:18:51.17:0,51,1116
chr10	68791427	.	A	AC	426.82	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.946;DP=688;FS=0.617;HRun=1;HaplotypeScore=126.3452;InbreedingCoeff=0.9994;MQ=85.22;MQ0=0;MQRankSum=-9.514;QD=9.28;ReadPosRankSum=1.865;VQSLOD=1.2810;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:84.24:0,84,1135	0/0:12,0:12:36.12:0,36,503	0/0:27,0:27:75.24:0,75,1030	0/0:20,0:20:51.17:0,51,706	0/0:32,0:32:93.31:0,93,1299	0/0:28,0:28:78.26:0,78,1087	0/0:14,0:14:42.13:0,42,569	0/0:39,0:39:99:0,114,1579	0/0:25,0:25:72.24:0,72,1007	1/1:19,2:21:28.05:231,28,0	1/1:16,9:25:49.91:317,50,0	0/0:21,0:21:63.21:0,63,880	0/0:26,0:26:75.25:0,75,1044	0/0:17,0:17:48.16:0,48,669	0/0:22,0:22:63.21:0,63,881	0/0:29,0:29:72.24:0,72,1005	0/0:24,0:24:66.22:0,66,922	0/0:13,0:13:39.10:0,39,524	0/0:25,0:25:75.25:0,75,1049	0/0:28,0:28:81.27:0,81,1131	0/0:29,0:29:81.27:0,81,1131	0/0:27,0:27:81.26:0,81,1113	0/0:24,0:24:69.21:0,69,946	0/0:17,0:17:51.15:0,51,693	0/0:22,0:21:63.21:0,63,881	0/0:35,0:35:99:0,105,1468	0/0:39,0:37:99:0,117,1616	0/0:18,0:18:51.12:0,51,696
chr10	68791429	.	T	TTCACATTCAATATTCAACTCA	16321.88	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=11.957;DP=716;FS=4.812;HRun=0;HaplotypeScore=426.6539;InbreedingCoeff=0.9999;MQ=84.11;MQ0=0;MQRankSum=-13.177;QD=206.61;ReadPosRankSum=1.739;VQSLOD=4.4870;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:78.27:0,78,3990	0/0:12,0:12:36.12:0,36,1925	0/0:29,0:29:75.24:0,75,3151	0/0:19,0:19:51.17:0,51,2122	0/0:33,0:33:93.31:0,93,4970	0/0:27,0:27:75.26:0,75,3133	0/0:15,0:15:42.11:0,42,1691	0/0:38,0:38:99:0,111,4827	0/0:25,0:25:72.25:0,72,3889	1/1:36,2:38:99:7700,113,0	1/1:32,9:41:99:8622,114,0	0/0:21,0:21:63.22:0,63,3317	0/0:25,0:25:75.23:0,75,3737	0/0:16,0:16:45.15:0,45,2409	0/0:23,0:23:66.21:0,66,3564	0/0:28,0:28:75.26:0,75,3925	0/0:24,0:24:69.24:0,69,3758	0/0:13,0:13:39.10:0,39,2154	0/0:24,0:24:72.25:0,72,3860	0/0:29,0:29:81.28:0,81,3989	0/0:28,0:28:78.27:0,78,4198	0/0:27,0:27:81.26:0,81,4039	0/0:23,0:23:66.23:0,66,3446	0/0:16,0:16:48.16:0,48,2244	0/0:22,0:21:63.19:0,63,3310	0/0:35,0:35:99:0,105,5602	0/0:39,0:37:99:0,117,5547	0/0:17,0:17:51.17:0,51,2458
chr10	68791461	.	GT	G	17206.58	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=12.874;DP=683;FS=0.312;HRun=2;HaplotypeScore=79.8556;InbreedingCoeff=0.9999;MQ=85.67;MQ0=0;MQRankSum=-2.431;QD=35.92;ReadPosRankSum=5.694;VQSLOD=5.0103;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:84.28:0,84,1255	1/1:0,13:13:39.08:487,39,0	0/0:23,0:23:69.17:0,69,985	0/0:22,0:22:60.17:0,60,840	0/0:35,0:35:99:0,105,1553	1/1:0,24:24:63.20:818,63,0	1/1:1,13:14:36.12:467,36,0	0/0:36,0:36:99:0,105,1532	1/1:0,25:25:69.22:893,69,0	1/1:1,32:33:96.31:1238,96,0	1/1:2,31:33:90.07:1100,90,0	1/1:0,24:24:72.23:934,72,0	1/1:0,27:27:78.25:1011,78,0	1/1:0,14:14:39.13:506,39,0	1/1:0,24:24:66.21:857,66,0	1/1:0,23:23:57.19:740,57,0	1/1:1,22:23:63.20:818,63,0	0/0:18,0:18:51.15:0,51,742	1/1:0,21:21:63.20:806,63,0	1/1:0,30:30:84.27:1090,84,0	1/1:1,20:21:54.18:701,54,0	1/1:1,28:29:84.23:1071,84,0	0/0:26,0:26:78.26:0,78,1167	0/0:15,0:15:45.11:0,45,630	1/1:0,20:20:54.18:701,54,0	1/1:0,30:30:87.26:1100,87,0	1/1:2,35:36:99:1324,102,0	1/1:0,14:14:42.14:545,42,0
chr10	68791910	.	T	TGGAG	1265	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-4.308;DP=683;FS=0.882;HRun=0;HaplotypeScore=105.2152;InbreedingCoeff=0.9914;MQ=88.84;MQ0=1;MQRankSum=-2.878;QD=50.60;ReadPosRankSum=2.115;VQSLOD=4.5875;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,117,2094	0/0:7,0:7:18.06:0,18,323	0/0:24,0:24:58.88:0,59,1077	0/0:25,0:26:60.16:0,60,1026	0/0:31,0:31:87.28:0,87,1567	0/0:24,0:24:69.19:0,69,1177	0/0:23,0:23:66.17:0,66,1101	0/0:23,0:23:63.22:0,63,1174	0/0:16,0:16:48.16:0,48,876	0/0:32,0:32:90.28:0,90,1561	0/0:21,0:21:63.18:0,63,1070	0/0:19,0:19:54.17:0,54,977	0/0:23,0:23:60.21:0,60,1107	0/0:17,0:17:39.13:0,39,716	0/0:32,0:32:96.26:0,96,1684	0/0:25,0:25:72.20:0,72,1241	0/0:36,0:36:99:0,108,1909	1/1:0,25:25:51.18:1360,51,0	0/0:21,0:21:60.20:0,60,1088	0/0:39,0:39:99:0,111,2053	0/0:20,0:20:57.20:0,57,1064	0/0:35,0:35:99:0,99,1837	0/0:21,0:21:57.13:0,57,995	0/0:12,0:12:36.12:0,36,672	0/0:18,0:18:51.17:0,51,952	0/0:26,0:25:69.22:0,69,1204	0/0:31,0:31:93.28:0,93,1642	0/0:14,0:14:30.10:0,30,560
chr10	68793163	.	A	AC	612.17	PASS	AB=1.000;AC=4;AF=0.071;AN=56;BaseQRankSum=7.631;DP=524;FS=0.000;HRun=7;HaplotypeScore=57.3616;InbreedingCoeff=0.5271;MQ=73.95;MQ0=2;MQRankSum=0.460;QD=10.20;ReadPosRankSum=0.813;VQSLOD=1.1140;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:98.93:0,99,927	0/0:11,0:11:30.05:0,30,290	0/1:25,0:21:0.80:1,0,217	0/1:13,0:10:39.54:40,0,66	0/0:27,0:27:81.13:0,81,782	0/0:11,0:11:24.03:0,24,232	0/0:10,0:10:27.03:0,27,256	0/0:31,0:31:81.10:0,81,770	0/0:17,0:17:48.06:0,48,454	0/0:25,0:25:72.11:0,72,691	0/0:24,0:24:71.99:0,72,673	0/0:20,0:20:60.05:0,60,569	0/0:9,0:9:27.04:0,27,258	0/0:7,0:7:18.03:0,18,174	0/0:12,0:12:33.03:0,33,309	0/0:8,0:8:19.37:0,19,162	0/0:28,0:28:76.88:0,77,719	1/1:0,22:22:57.17:678,57,0	0/0:18,0:18:48.02:0,48,445	0/0:25,0:25:65.88:0,66,615	0/0:9,0:9:27.01:0,27,253	0/0:19,0:19:57.09:0,57,550	0/0:28,0:28:78.04:0,78,729	0/0:9,0:9:24.03:0,24,232	0/0:19,0:19:57.09:0,57,550	0/0:22,0:22:60.07:0,60,572	0/0:19,0:19:57.08:0,57,544	0/0:19,0:19:45.05:0,45,428
chr10	68793314	.	C	CACAG	2408.61	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-7.633;DP=585;FS=13.930;HRun=0;HaplotypeScore=95.8046;InbreedingCoeff=0.9900;MQ=63.99;MQ0=0;MQRankSum=-3.085;QD=30.88;ReadPosRankSum=-0.002;VQSLOD=2.8367;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:48.14:0,48,756	0/0:11,0:11:27.06:0,27,386	0/0:29,0:26:33.95:0,34,444	0/0:24,0:20:50.21:0,50,681	0/0:17,0:17:39.09:0,39,587	0/0:18,0:18:33.11:0,33,529	0/0:30,0:30:69.18:0,69,1053	1/1:26,10:38:33.99:704,34,0	0/0:18,0:18:42.14:0,42,683	0/0:19,0:19:36.11:0,36,567	0/0:13,0:13:18.06:0,18,295	0/0:17,0:17:45.15:0,45,737	0/0:14,0:14:36.12:0,36,589	0/0:22,0:22:57.19:0,57,930	0/0:22,0:22:57.17:0,57,903	0/0:20,0:20:51.16:0,51,807	0/0:18,0:18:48.15:0,48,756	1/1:9,29:40:75.26:1826,75,0	0/0:22,0:22:36.04:0,36,481	0/0:18,0:18:38.98:0,39,630	0/0:19,0:19:42.14:0,42,678	0/0:18,0:18:36.11:0,36,565	0/0:13,0:14:36.12:0,36,562	0/0:30,0:30:54.08:0,54,826	0/0:17,0:17:30.06:0,30,440	0/0:20,0:20:33.10:0,33,518	0/0:27,0:27:66.18:0,66,1002	0/0:6,0:6:18.03:0,18,267
chr10	68794092	.	TCCTC	T	1690.16	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.377;DP=540;FS=17.518;HRun=0;HaplotypeScore=89.1536;InbreedingCoeff=0.8860;MQ=62.44;MQ0=2;MQRankSum=1.910;QD=33.80;ReadPosRankSum=-0.792;VQSLOD=2.1281;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:81.21:0,81,1717	0/0:10,0:10:30.04:0,30,531	0/0:17,0:7:3.01:0,3,61	0/0:23,0:15:18.93:0,19,279	0/0:16,0:16:36.07:0,36,731	0/0:18,0:18:42.09:0,42,859	0/0:14,0:14:33.06:0,33,576	0/0:20,0:20:27.08:0,27,482	0/0:16,0:16:45.11:0,45,920	1/1:3,27:31:79.12:1221,79,0	1/1:3,16:19:41.64:590,42,0	0/0:20,0:20:45.15:0,45,999	0/0:16,0:16:42.10:0,42,861	0/0:26,0:26:63.20:0,63,1365	0/0:21,0:21:51.15:0,51,1075	0/0:17,0:17:42.13:0,42,894	0/0:15,0:15:29.22:0,29,640	0/0:13,0:13:36.11:0,36,784	0/0:12,0:12:23.99:0,24,364	0/0:19,0:19:42.07:0,42,834	0/0:24,0:24:57.05:0,57,1105	0/0:16,0:16:36.11:0,36,815	0/0:10,0:10:27.08:0,27,589	0/0:40,0:40:93.30:0,93,2064	0/0:27,0:27:72.22:0,72,1565	0/0:21,0:21:60.15:0,60,1293	0/0:17,0:17:42.13:0,42,851	0/0:7,0:7:9.03:0,9,223
chr10	68794318	.	A	AGTGT	2048.72	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-7.180;DP=672;FS=2.288;HRun=0;HaplotypeScore=106.5358;InbreedingCoeff=0.9117;MQ=68.84;MQ0=0;MQRankSum=-1.577;QD=41.81;ReadPosRankSum=-3.116;VQSLOD=3.2401;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,120,2045	0/0:10,0:10:30.10:0,30,519	0/0:16,0:16:2.66:0,3,314	0/0:16,0:16:30.07:0,30,481	0/0:26,0:26:69.22:0,69,1153	0/0:18,0:18:42.14:0,42,730	0/0:20,0:20:51.17:0,51,875	1/1:11,14:28:56.93:1103,57,0	0/0:20,0:20:60.21:0,60,1040	0/0:31,0:30:72.22:0,72,1204	0/0:22,0:23:54.18:0,54,914	0/0:23,0:23:66.22:0,66,1122	0/0:39,0:39:99:0,105,1817	0/0:26,0:26:72.23:0,72,1225	0/0:23,0:23:60.21:0,60,1043	0/0:25,0:25:69.24:0,69,1200	0/0:35,0:34:90.31:0,90,1555	1/1:2,17:21:42.14:1067,42,0	0/0:25,0:26:51.14:0,51,809	0/0:15,0:15:33.11:0,33,574	0/0:33,0:33:78.25:0,78,1329	0/0:24,0:24:63.19:0,63,1040	0/0:16,0:16:33.11:0,33,570	0/0:27,0:27:75.26:0,75,1285	0/0:18,0:18:51.16:0,51,837	0/0:26,0:26:60.19:0,60,1017	0/0:24,0:24:51.12:0,51,828	0/0:16,0:16:48.15:0,48,808
chr10	68795563	.	GATTATTTA	G	4366.05	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=11.719;DP=587;FS=7.858;HRun=0;HaplotypeScore=149.1140;InbreedingCoeff=0.9987;MQ=78.27;MQ0=0;MQRankSum=-10.736;QD=50.18;ReadPosRankSum=-0.356;VQSLOD=4.1959;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:93.28:0,93,3678	0/0:9,0:9:24.08:0,24,1025	0/0:19,0:19:43.33:0,43,1443	0/0:13,0:13:30.10:0,30,1122	0/0:26,0:26:72.25:0,72,2967	0/0:18,0:18:51.16:0,51,2021	0/0:22,0:22:57.20:0,57,2296	1/1:9,16:25:48.15:1227,48,0	0/0:21,0:21:57.20:0,57,2404	1/1:5,21:26:66.15:1538,66,0	1/1:3,15:18:33.11:881,33,0	0/0:20,0:20:45.14:0,45,1768	0/0:29,0:29:77.51:0,78,3083	0/0:20,0:20:57.18:0,57,2277	0/0:18,0:18:45.12:0,45,1714	0/0:17,0:17:42.14:0,42,1728	0/0:30,0:30:84.26:0,84,3369	1/1:4,14:18:27.09:720,27,0	0/0:15,0:15:39.13:0,39,1532	0/0:32,0:32:84.27:0,84,3239	0/0:13,0:13:30.09:0,30,1090	0/0:20,0:20:48.16:0,48,2048	0/0:21,0:21:54.19:0,54,2223	0/0:25,0:25:66.23:0,66,2675	0/0:20,0:20:54.19:0,54,2190	0/0:18,0:18:51.17:0,51,2015	0/0:19,0:19:54.19:0,54,2307	0/0:21,0:21:61.45:0,61,2405
chr10	68797835	.	T	TTTA	345.22	PASS	AC=4;AF=0.118;AN=34;BaseQRankSum=3.654;DP=257;FS=36.455;HRun=0;HaplotypeScore=23.9708;InbreedingCoeff=0.6578;MQ=47.44;MQ0=105;MQRankSum=-1.416;QD=15.69;ReadPosRankSum=1.919;VQSLOD=1.2031;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	0/0:5,0:4:12.04:0,12,203	0/0:10,0:4:9.02:0,9,99	0/0:5,0:3:6.02:0,6,68	0/0:10,0:9:15.05:0,15,253	./.	0/0:13,0:3:9.03:0,9,153	1/1:6,8:6:15.04:251,15,0	./.	0/0:10,0:4:12.04:0,12,203	0/0:10,0:9:15.01:0,15,223	./.	./.	./.	./.	./.	./.	1/1:2,6:4:12.04:199,12,0	0/0:9,0:3:9.03:0,9,153	0/0:18,0:16:42.09:0,42,657	./.	0/0:4,0:4:11.99:0,12,172	0/0:11,0:8:24.08:0,24,407	./.	0/0:12,0:9:21.07:0,21,356	0/0:12,0:7:21.07:0,21,339	0/0:11,0:5:3.01:0,3,51	0/0:10,0:6:3.01:0,3,51
chr10	68798124	.	T	TTCTC	4933.21	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-8.408;DP=527;FS=1.102;HRun=0;HaplotypeScore=75.9070;InbreedingCoeff=0.9717;MQ=56.76;MQ0=35;MQRankSum=-2.449;QD=62.45;ReadPosRankSum=0.484;VQSLOD=6.4927;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:26:78.18:0,78,1457	0/0:9,0:9:27.09:0,27,538	0/0:11,0:4:11.93:0,12,187	0/0:11,0:6:8.18:0,8,218	0/0:21,0:21:57.14:0,57,1064	0/0:14,0:14:39.12:0,39,742	0/0:14,0:13:36.09:0,36,660	1/1:1,10:13:33.11:825,33,0	0/0:20,0:19:51.13:0,51,978	1/1:2,15:18:51.16:1294,51,0	1/1:2,18:18:45.15:1220,45,0	0/0:16,0:16:45.15:0,45,898	0/0:24,0:24:72.19:0,72,1352	0/0:13,0:12:36.12:0,36,718	0/0:20,0:19:57.11:0,57,1058	0/0:28,0:28:81.18:0,81,1451	0/0:26,0:24:69.24:0,69,1353	1/1:1,22:24:60.21:1595,60,0	0/0:15,0:14:39.13:0,39,742	0/0:31,0:30:84.19:0,84,1532	0/0:14,0:11:30.10:0,30,578	0/0:21,0:21:57.20:0,57,1137	0/0:15,0:13:36.08:0,36,658	0/0:18,0:18:54.14:0,54,994	0/0:13,0:12:33.03:0,33,578	0/0:30,0:27:78.22:0,78,1486	0/0:23,0:22:66.22:0,66,1273	0/0:13,0:11:30.10:0,30,599
chr10	68798248	.	T	TG	1688.57	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-1.299;DP=690;FS=0.578;HRun=1;HaplotypeScore=72.3078;InbreedingCoeff=0.9983;MQ=84.95;MQ0=0;MQRankSum=-1.221;QD=37.52;ReadPosRankSum=-2.258;VQSLOD=3.2574;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,159,1988	0/0:9,0:9:24.08:0,24,305	0/0:32,0:32:54.59:0,55,935	0/0:23,0:22:59.89:0,60,704	0/0:26,0:26:78.22:0,78,990	0/0:16,0:16:48.12:0,48,592	0/0:36,0:36:99:0,108,1373	1/1:0,24:24:69.23:1027,69,0	0/0:25,0:25:72.23:0,72,934	0/0:24,0:24:66.21:0,66,849	0/0:18,0:18:51.13:0,51,644	0/0:24,0:24:69.21:0,69,882	0/0:30,0:30:87.23:0,87,1094	0/0:23,0:23:69.16:0,69,848	0/0:26,0:26:75.19:0,75,940	0/0:22,0:22:60.15:0,60,760	0/0:25,0:25:63.16:0,63,786	1/1:5,16:21:54.64:784,55,0	0/0:29,0:29:84.22:0,84,1036	0/0:16,0:16:45.15:0,45,581	0/0:41,0:41:99:0,114,1480	0/0:13,0:13:36.08:0,36,443	0/0:23,0:23:69.16:0,69,857	0/0:21,0:21:63.16:0,63,791	0/0:23,0:23:69.15:0,69,842	0/0:35,0:35:99:0,102,1300	0/0:22,0:21:66.12:0,66,804	0/0:10,0:10:27.09:0,27,351
chr10	68798517	.	TC	T	1428.99	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=10.427;DP=681;FS=2.027;HRun=2;HaplotypeScore=70.2230;InbreedingCoeff=0.9999;MQ=88.05;MQ0=0;MQRankSum=-1.979;QD=34.85;ReadPosRankSum=-3.006;VQSLOD=2.8741;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,117,1725	0/0:13,0:13:39.13:0,39,585	0/0:20,0:20:60.20:0,60,894	0/0:28,0:28:72.07:0,72,997	0/0:32,0:32:96.31:0,96,1419	0/0:26,0:26:75.25:0,75,1124	0/0:23,0:23:69.20:0,69,1009	1/1:0,22:22:66.19:830,66,0	0/0:27,0:27:78.26:0,78,1166	0/0:21,0:21:63.21:0,63,944	0/0:19,0:19:57.19:0,57,852	0/0:29,0:29:84.28:0,84,1259	0/0:29,0:29:81.27:0,81,1214	0/0:29,0:29:87.29:0,87,1304	0/0:18,0:18:51.16:0,51,746	0/0:32,0:32:96.31:0,96,1414	0/0:17,0:17:51.17:0,51,760	1/1:0,19:19:57.14:721,57,0	0/0:13,0:13:39.13:0,39,584	0/0:28,0:28:72.24:0,72,1074	0/0:37,0:37:99:0,111,1620	0/0:24,0:24:72.23:0,72,1059	0/0:18,0:18:54.18:0,54,808	0/0:25,0:25:75.24:0,75,1104	0/0:19,0:19:54.17:0,54,787	0/0:31,0:31:93.32:0,93,1394	0/0:25,0:25:75.24:0,75,1104	0/0:18,0:18:54.18:0,54,807
chr10	68799581	.	GCT	G	2295.45	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.791;DP=724;FS=2.207;HRun=0;HaplotypeScore=91.4439;InbreedingCoeff=0.9971;MQ=84.05;MQ0=3;MQRankSum=-1.967;QD=34.26;ReadPosRankSum=-3.001;VQSLOD=5.0004;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,120,2041	0/0:10,0:10:30.10:0,30,498	0/0:38,0:30:20.52:0,21,773	0/0:37,0:32:64.06:0,64,974	0/0:23,0:23:60.21:0,60,1038	0/0:15,0:14:42.14:0,42,727	0/0:20,0:20:57.19:0,57,975	1/1:2,33:35:96.29:1245,96,0	0/0:19,0:19:51.16:0,51,851	0/0:35,0:35:96.31:0,96,1604	0/0:10,0:10:30.06:0,30,463	0/0:22,0:22:57.20:0,57,987	0/0:22,0:22:54.15:0,54,878	0/0:44,0:44:99:0,117,2007	0/0:28,0:28:78.25:0,78,1313	0/0:30,0:30:81.25:0,81,1333	0/0:23,0:23:63.19:0,63,1043	1/1:9,23:32:90.26:1172,90,0	0/0:27,0:27:66.22:0,66,1077	0/0:17,0:17:48.14:0,48,770	0/0:32,0:32:87.30:0,87,1480	0/0:19,0:19:48.14:0,48,773	0/0:24,0:24:69.24:0,69,1194	0/0:34,0:34:93.32:0,93,1606	0/0:22,0:22:54.17:0,54,879	0/0:19,0:19:54.18:0,54,936	0/0:26,0:26:75.22:0,75,1206	0/0:14,0:14:42.14:0,42,693
chr10	68799673	.	CG	C	2419.46	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=12.947;DP=917;FS=2.131;HRun=2;HaplotypeScore=97.0697;InbreedingCoeff=0.9999;MQ=84.50;MQ0=1;MQRankSum=-5.179;QD=34.56;ReadPosRankSum=-2.132;VQSLOD=2.9806;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:71,0:71:99:0,202,2940	0/0:12,0:12:34.36:0,34,497	0/0:31,0:31:80.38:0,80,1167	0/0:26,0:26:71.51:0,72,933	0/0:29,0:29:87.29:0,87,1303	0/0:21,0:21:60.19:0,60,880	0/0:24,0:24:72.24:0,72,1076	1/1:2,31:33:90.26:1139,90,0	0/0:24,0:24:72.24:0,72,1075	0/0:38,0:38:99:0,114,1707	0/0:18,0:18:51.17:0,51,764	0/0:29,0:29:87.28:0,87,1278	0/0:40,0:40:99:0,117,1731	0/0:35,0:35:99:0,105,1491	0/0:44,0:44:99:0,129,1913	0/0:36,0:36:99:0,108,1618	0/0:29,1:30:48.44:0,48,1219	1/1:1,36:37:99:1402,108,0	0/0:35,0:35:99:0,105,1496	0/0:35,0:35:99:0,105,1569	0/0:50,0:49:99:0,144,2137	0/0:29,0:29:87.29:0,87,1301	0/0:26,0:26:78.26:0,78,1164	0/0:54,0:54:99:0,157,2315	0/0:23,0:23:69.21:0,69,1012	0/0:39,0:39:99:0,114,1645	0/0:26,0:26:78.26:0,78,1156	0/0:21,0:21:63.19:0,63,915
chr10	68799929	.	C	CATG	2624.96	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-4.799;DP=826;FS=5.676;HRun=0;HaplotypeScore=114.1200;InbreedingCoeff=0.9996;MQ=83.62;MQ0=0;MQRankSum=-5.075;QD=59.66;ReadPosRankSum=-2.804;VQSLOD=4.4179;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:68,0:68:99:0,202,3315	0/0:11,0:11:30.10:0,30,500	0/0:29,0:29:87.26:0,87,1355	0/0:24,0:24:63.20:0,63,970	0/0:30,0:30:81.28:0,81,1349	0/0:28,0:28:84.29:0,84,1399	0/0:24,0:24:66.23:0,66,1093	1/1:3,22:26:78.25:1675,78,0	0/0:28,0:28:84.29:0,84,1399	0/0:37,0:36:99:0,108,1798	0/0:26,0:26:75.23:0,75,1191	0/0:31,0:31:87.30:0,87,1447	0/0:32,0:32:96.31:0,96,1558	0/0:38,0:38:99:0,108,1769	0/0:47,0:47:99:0,138,2289	0/0:36,0:36:96.33:0,96,1599	0/0:24,1:25:66.23:0,66,1099	1/1:1,17:18:48.16:1071,48,0	0/0:23,0:23:60.19:0,60,953	0/0:31,0:31:87.30:0,87,1439	0/0:32,0:32:93.30:0,93,1519	0/0:30,0:30:84.27:0,84,1371	0/0:21,0:21:63.22:0,63,1041	0/0:48,0:48:99:0,144,2391	0/0:16,0:16:48.16:0,48,795	0/0:26,0:26:69.24:0,69,1148	0/0:30,0:30:84.29:0,84,1396	0/0:11,0:11:33.11:0,33,550
chr10	68801930	.	C	CTT	878.97	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-5.401;DP=659;FS=5.597;HRun=7;HaplotypeScore=79.8777;InbreedingCoeff=0.9957;MQ=75.06;MQ0=0;MQRankSum=2.083;QD=33.81;ReadPosRankSum=-3.420;VQSLOD=2.9721;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:78.18:0,78,892	0/0:11,0:11:27.07:0,27,315	0/0:22,0:21:26.65:0,27,493	0/0:15,0:16:24.49:0,24,232	0/0:28,0:28:69.18:0,69,791	0/0:27,0:27:75.20:0,75,858	0/0:24,0:24:66.18:0,66,758	1/1:6,20:26:60.20:974,60,0	0/0:21,0:21:57.13:0,57,642	0/0:26,0:26:72.15:0,72,800	0/0:19,0:19:54.14:0,54,616	0/0:15,0:15:42.11:0,42,479	0/0:18,0:18:51.14:0,51,594	0/0:18,0:18:42.11:0,42,489	0/0:26,0:26:75.22:0,75,873	0/0:18,0:18:51.15:0,51,594	0/0:32,0:32:84.22:0,84,967	0/0:26,0:26:66.19:0,66,769	0/0:16,0:16:36.06:0,36,392	0/0:28,0:28:78.22:0,78,909	0/0:20,0:20:48.12:0,48,559	0/0:26,0:26:57.05:0,57,626	0/0:19,0:19:54.16:0,54,627	0/0:28,0:28:81.22:0,81,932	0/0:23,0:23:60.16:0,60,688	0/0:44,0:44:99:0,111,1282	0/0:35,0:35:96.28:0,96,1118	0/0:16,0:16:36.10:0,36,419
chr10	68802266	.	GGAA	G	516.21	PASS	AB=0.749;AC=3;AF=0.058;AN=52;BaseQRankSum=7.093;DP=654;FS=5.570;HRun=0;HaplotypeScore=77.4797;InbreedingCoeff=0.0613;MQ=43.73;MQ0=110;MQRankSum=-4.404;QD=5.67;ReadPosRankSum=-2.457;VQSLOD=1.2904;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:33:41.26:0,41,1219	0/0:6,0:5:0.02:0,0,96	0/0:11,0:1:3.01:0,3,39	./.	0/0:25,0:21:36.08:0,36,831	0/0:24,0:16:35.94:0,36,705	0/0:33,0:18:32.34:0,32,566	0/1:43,0:28:27.54:28,0,158	0/0:14,0:10:27.07:0,27,511	0/1:21,16:29:80.91:428,0,81	0/1:2,9:10:3.98:158,0,4	0/0:26,0:23:56.93:0,57,1013	0/0:18,0:11:13.12:0,13,454	0/0:20,0:18:48.10:0,48,895	0/0:24,0:18:38.46:0,38,653	0/0:24,0:18:42.13:0,42,862	0/0:31,0:24:44.97:0,45,1078	./.	0/0:24,0:13:26.98:0,27,508	0/0:26,0:20:41.75:0,42,748	0/0:46,0:34:76.40:0,76,1488	0/0:26,0:22:57.10:0,57,1116	0/0:17,0:15:27.09:0,27,567	0/0:31,0:24:49.67:0,50,944	0/0:15,0:12:34.29:0,34,556	0/0:37,0:22:48.96:0,49,1017	0/0:9,0:8:22.86:0,23,413	0/0:14,0:8:23:0,23,396
chr10	68803228	.	CA	C	2167.18	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=10.830;DP=497;FS=9.267;HRun=9;HaplotypeScore=48.6931;InbreedingCoeff=0.9637;MQ=69.35;MQ0=0;MQRankSum=1.243;QD=21.67;ReadPosRankSum=-1.423;VQSLOD=3.3938;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:51.15:0,51,588	0/0:9,0:9:24.07:0,24,277	0/0:7,0:7:14.82:0,15,139	0/0:4,0:4:6.02:0,6,69	0/0:27,0:27:78.21:0,78,880	0/0:23,0:23:63.13:0,63,711	0/0:7,0:7:18.05:0,18,208	1/1:3,20:23:60.01:544,60,0	0/0:11,0:11:33.10:0,33,381	1/1:1,29:30:87.05:795,87,0	1/1:1,23:24:57.02:521,57,0	0/0:18,0:18:48.14:0,48,554	0/0:18,0:18:51.14:0,51,580	0/0:14,0:14:42.12:0,42,485	0/0:22,0:23:60.01:0,60,672	0/0:19,0:19:42.11:0,42,475	0/0:16,0:16:48.13:0,48,544	1/1:5,18:23:51:467,51,0	0/0:10,0:11:26.91:0,27,291	0/0:31,0:31:76.44:0,76,855	0/0:11,0:11:33.10:0,33,381	0/0:14,0:14:42.12:0,42,485	0/0:21,0:21:60.18:0,60,692	0/0:10,0:10:30.09:0,30,346	0/0:21,0:21:57.17:0,57,658	0/0:23,1:25:44.58:0,45,749	0/0:27,0:27:75.21:0,75,856	0/0:13,0:13:39.10:0,39,440
chr10	68803578	.	AT	A	355.19	PASS	AB=0.895;AC=5;AF=0.089;AN=56;BaseQRankSum=4.842;DP=305;FS=4.522;HRun=9;HaplotypeScore=31.4768;InbreedingCoeff=0.4719;MQ=68.19;MQ0=3;MQRankSum=0.964;QD=8.46;ReadPosRankSum=1.303;VQSLOD=0.3172;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:26.91:0,27,291	0/0:3,0:3:6.02:0,6,69	0/0:6,0:5:3.48:0,3,35	0/0:7,0:6:4.86:0,5,72	0/0:14,0:14:39.10:0,39,440	0/0:17,0:16:42.11:0,42,474	0/0:9,0:9:18.05:0,18,208	0/0:20,0:18:0:0,0,0	0/0:2,0:2:6.02:0,6,69	1/1:4,10:14:29.97:265,30,0	1/1:3,8:11:1.58:194,2,0	0/0:7,0:7:17.75:0,18,170	0/0:10,0:10:24.07:0,24,277	0/0:9,0:9:24.04:0,24,250	0/0:4,0:4:12.04:0,12,138	0/0:8,0:8:24.02:0,24,253	0/0:31,0:30:66.13:0,66,735	0/0:19,0:18:48.13:0,48,543	0/0:21,0:21:60.08:0,60,635	0/0:13,0:13:39.08:0,39,422	0/0:7,0:7:15.03:0,15,163	0/0:1,0:1:3.01:0,3,35	0/0:4,0:4:12.04:0,12,138	0/0:2,0:2:6.02:0,6,69	0/0:6,0:6:15.04:0,15,173	0/1:15,2:17:6.79:7,0,437	0/0:16,0:16:42.01:0,42,443	0/0:15,0:15:39.12:0,39,450
chr10	68803925	.	C	CA	231.63	PASS	AB=0.913;AC=3;AF=0.054;AN=56;BaseQRankSum=-3.709;DP=578;FS=2.904;HRun=10;HaplotypeScore=61.2101;InbreedingCoeff=0.5927;MQ=80.01;MQ0=0;MQRankSum=1.775;QD=7.02;ReadPosRankSum=-0.568;VQSLOD=1.3989;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,1:31:48.90:0,49,608	0/0:8,0:8:23.97:0,24,197	0/0:14,0:14:5.72:0,6,90	0/0:23,0:22:16.19:0,16,203	0/0:10,0:10:29.97:0,30,246	0/0:23,1:24:27.97:0,28,436	0/0:20,0:20:53.91:0,54,439	0/0:36,0:36:98.33:0,98,792	0/0:14,0:14:32.96:0,33,271	0/0:19,0:19:44.92:0,45,367	0/0:19,0:19:44.92:0,45,369	0/0:24,1:27:32.90:0,33,459	0/0:25,0:25:59.88:0,60,487	0/0:22,1:23:27.92:0,28,433	0/0:19,0:19:50.91:0,51,419	0/1:19,2:21:19.01:19,0,290	0/0:24,0:24:68.89:0,69,563	1/1:1,11:12:30.07:318,30,0	0/0:18,1:19:21.92:0,22,382	0/0:11,0:11:23.94:0,24,194	0/0:20,0:20:47.88:0,48,388	0/0:20,0:20:50.91:0,51,416	0/0:26,1:27:68.85:0,69,562	0/0:29,0:29:69.87:0,70,637	0/0:19,0:19:50.91:0,51,416	0/0:21,0:21:31.94:0,32,418	0/0:23,0:24:53.74:0,54,433	0/0:18,0:18:41.92:0,42,345
chr10	68806057	.	AAAAC	A	1641.55	PASS	AB=0.955;AC=7;AF=0.125;AN=56;BaseQRankSum=9.200;DP=771;FS=6.819;HRun=0;HaplotypeScore=122.1251;InbreedingCoeff=0.8193;MQ=61.53;MQ0=4;MQRankSum=0.181;QD=18.44;ReadPosRankSum=-3.248;VQSLOD=2.1717;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:44.08:0,44,1810	0/0:8,0:8:24.08:0,24,566	0/0:36,0:23:14.92:0,15,382	0/0:25,0:19:24.08:0,24,518	0/0:28,0:27:66.22:0,66,1530	0/0:22,0:22:54.19:0,54,1263	0/1:20,1:21:12.57:13,0,623	1/1:11,16:26:48.14:718,48,0	0/0:33,0:33:84.27:0,84,1895	1/1:11,11:22:30.10:487,30,0	1/1:6,13:19:36.12:572,36,0	0/0:29,0:29:75.24:0,75,1716	0/0:34,0:34:75.25:0,75,1727	0/0:26,0:26:51.16:0,51,1159	0/0:30,0:30:72.22:0,72,1632	0/0:30,1:31:23.55:0,24,1470	0/0:35,0:34:72.22:0,72,1623	0/0:8,0:17:23.99:0,24,327	0/0:20,0:19:36.59:0,37,834	0/0:37,0:37:84.23:0,84,1919	0/0:45,0:44:99:0,105,2431	0/0:19,0:19:27.08:0,27,607	0/0:26,0:26:54.19:0,54,1253	0/0:46,0:45:99:0,111,2590	0/0:13,0:13:30.10:0,30,706	0/0:29,1:30:8.52:0,9,1236	0/0:35,0:35:78.27:0,78,1840	0/0:17,0:17:39.12:0,39,832
chr10	68806258	.	GAC	G	716.67	PASS	AB=0.894;AC=5;AF=0.089;AN=56;BaseQRankSum=6.807;DP=634;FS=11.290;HRun=0;HaplotypeScore=93.2767;InbreedingCoeff=0.3621;MQ=67.24;MQ0=1;MQRankSum=-0.666;QD=7.17;ReadPosRankSum=-3.026;VQSLOD=1.8604;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,99,1648	0/0:12,0:12:30.10:0,30,497	0/0:32,1:30:61.25:0,61,1010	0/0:26,0:23:57.16:0,57,843	0/0:23,1:24:22.02:0,22,910	0/0:19,0:19:48.16:0,48,794	0/0:26,1:27:28.03:0,28,1011	1/1:6,23:29:66.08:752,66,0	0/0:21,0:21:57.11:0,57,888	0/0:29,0:29:78.26:0,78,1282	0/0:8,0:8:18.06:0,18,301	0/0:21,0:21:51.17:0,51,853	0/0:23,0:23:60.20:0,60,983	0/0:29,0:29:72.25:0,72,1204	0/0:20,0:20:42.14:0,42,698	0/0:25,0:24:60.19:0,60,978	0/0:25,0:25:50.92:0,51,898	0/1:23,2:25:10.10:10,0,937	0/1:15,4:19:66.86:67,0,539	0/0:23,0:23:54.18:0,54,896	0/1:25,2:27:1.12:1,0,1078	0/0:23,0:23:48.15:0,48,777	0/0:12,0:12:27.09:0,27,452	0/0:29,1:30:22.02:0,22,915	0/0:13,0:13:24.08:0,24,401	0/0:16,0:16:48.16:0,48,803	0/0:25,0:25:57.67:0,58,953	0/0:15,1:16:3.94:0,4,588
chr10	68806309	.	TAA	T	4657.51	PASS	AB=0.608;AC=39;AF=0.696;AN=56;BaseQRankSum=0.133;DP=614;FS=3.072;HRun=16;HaplotypeScore=91.6459;InbreedingCoeff=0.6764;MQ=66.84;MQ0=7;MQRankSum=-1.054;QD=10.88;ReadPosRankSum=5.720;VQSLOD=3.9897;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:46:84.98:0,85,1007	1/1:3,3:6:4.55:47,5,0	0/0:32,0:16:18.98:0,19,152	0/0:24,0:11:4.99:0,5,25	0/0:20,0:25:58.36:0,58,630	1/1:8,17:26:35.38:329,35,0	1/1:3,11:14:32.91:276,33,0	1/1:7,1:21:38.40:176,38,0	1/1:5,11:19:29.27:266,29,0	0/0:16,0:26:13.26:0,13,148	0/1:5,2:16:19.52:20,0,106	1/1:4,15:18:29.58:250,30,0	1/1:3,15:20:32.58:304,33,0	1/1:6,17:25:26.52:343,27,0	1/1:2,13:16:29.46:237,29,0	1/1:8,16:23:32.77:276,33,0	1/1:5,16:21:32.77:276,33,0	1/1:9,0:24:6.17:91,6,0	0/1:7,6:14:22.25:112,0,22	1/1:5,16:21:28.07:240,28,0	1/1:6,10:20:11.27:157,11,0	1/1:10,13:22:29.32:231,29,0	0/0:11,0:11:29.33:0,29,295	0/0:19,0:17:39.25:0,39,456	1/1:4,14:18:20.86:172,21,0	0/1:7,18:26:29.69:335,0,30	1/1:9,16:28:19.88:243,20,0	1/1:13,11:23:14.67:276,15,0
chr10	68806646	.	C	CAA	4321.75	PASS	AB=0.785;AC=35;AF=0.625;AN=56;BaseQRankSum=-2.818;DP=578;FS=8.300;HRun=15;HaplotypeScore=91.6959;InbreedingCoeff=0.7581;MQ=54.70;MQ0=14;MQRankSum=-3.653;QD=11.34;ReadPosRankSum=-1.976;VQSLOD=3.0399;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:41:82.21:0,82,600	1/1:2,8:11:12.03:142,12,0	0/0:24,0:10:16.45:0,16,85	0/1:26,0:9:0.95:1,0,18	0/0:21,0:24:49.79:0,50,362	1/1:4,12:19:26.44:297,26,0	1/1:11,7:19:35.45:395,35,0	0/0:24,0:27:37.53:0,38,270	0/1:10,9:19:11.98:173,0,12	0/0:18,0:17:26.66:0,27,213	0/0:11,0:13:23.31:0,23,204	1/1:11,2:13:13.47:185,13,0	1/1:3,9:16:12.01:155,12,0	1/1:7,8:16:9.24:230,9,0	1/1:5,11:18:18.04:215,18,0	1/1:6,9:20:9.47:231,9,0	1/1:7,15:22:25.80:273,26,0	0/0:1,0:1:2.99:0,3,23	1/1:5,10:17:35.78:389,36,0	1/1:10,15:27:37.82:420,38,0	1/1:4,0:7:0.47:1,0,0	1/1:9,8:16:14.15:114,14,0	0/0:3,0:20:35.45:0,35,150	0/0:5,0:24:44.56:0,45,222	1/1:10,11:29:10.37:256,10,0	1/1:12,2:20:29.84:226,30,0	0/1:13,10:23:0.42:169,0,0	1/1:6,15:28:47.57:450,48,0
chr10	68807131	.	TCCGA	T	2319.40	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.244;DP=642;FS=2.092;HRun=0;HaplotypeScore=104.9871;InbreedingCoeff=0.9915;MQ=85.26;MQ0=0;MQRankSum=-7.384;QD=55.22;ReadPosRankSum=0.220;VQSLOD=5.0450;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,147,4128	0/0:10,0:10:30.10:0,30,848	0/0:19,0:19:57.20:0,57,1486	0/0:24,0:24:62.88:0,63,1472	0/0:23,0:23:69.24:0,69,1960	0/0:16,0:16:48.16:0,48,1316	0/0:25,0:25:75.24:0,75,2042	1/1:0,20:20:60.21:1246,60,0	0/0:17,0:17:51.18:0,51,1447	0/0:29,0:29:87.30:0,87,2435	0/0:20,0:20:54.19:0,54,1487	0/0:32,0:32:96.33:0,96,2771	0/0:26,0:26:78.27:0,78,2257	0/0:22,0:22:63.20:0,63,1759	0/0:20,0:20:60.21:0,60,1648	0/0:12,0:12:36.12:0,36,1043	0/0:37,0:37:99:0,111,3194	1/1:0,22:22:57.20:1195,57,0	0/0:17,0:17:51.17:0,51,1388	0/0:20,0:20:57.15:0,57,1557	0/0:43,0:43:99:0,129,3390	0/0:24,0:24:72.25:0,72,2067	0/0:14,0:14:42.14:0,42,1158	0/0:28,0:28:84.29:0,84,2392	0/0:19,0:19:57.20:0,57,1637	0/0:25,0:25:75.26:0,75,2116	0/0:22,0:22:66.23:0,66,1877	0/0:5,0:5:15.05:0,15,435
chr10	68807205	.	TTG	T	275.80	PASS	AB=0.918;AC=5;AF=0.089;AN=56;BaseQRankSum=7.259;DP=690;FS=1.407;HRun=0;HaplotypeScore=88.0358;InbreedingCoeff=0.3193;MQ=60.90;MQ0=4;MQRankSum=-0.911;QD=3.40;ReadPosRankSum=-1.035;VQSLOD=2.1776;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:43,3:46:74.07:0,74,1586	0/1:7,1:8:18.60:19,0,196	0/0:31,0:16:3.67:0,4,71	0/0:24,0:13:19.05:0,19,176	0/0:25,0:25:57.18:0,57,886	0/0:20,2:22:14.51:0,15,723	0/1:30,0:30:0.53:1,0,959	1/1:7,0:24:49.37:315,49,0	0/0:18,0:18:54.14:0,54,802	0/0:31,2:33:17.62:0,18,1200	0/0:15,0:15:42.11:0,42,615	0/0:31,0:31:35.72:0,36,954	0/0:23,0:23:60.16:0,60,899	0/0:25,2:27:29.58:0,30,933	0/0:18,0:18:39.13:0,39,628	0/0:15,0:15:42.14:0,42,680	0/0:46,0:46:99:0,111,1733	0/0:13,0:17:27.75:0,28,256	0/0:15,0:15:21.06:0,21,312	0/0:19,1:20:11.48:0,11,644	0/0:48,0:48:99:0,123,1863	0/0:22,1:23:17.53:0,18,758	0/0:25,0:25:68.25:0,68,1045	0/0:30,2:32:7.95:0,8,1114	0/0:18,0:18:42.12:0,42,634	0/0:29,0:29:81.25:0,81,1241	0/1:16,3:19:55.78:56,0,668	0/0:6,1:7:9.03:0,9,140
chr10	68807228	.	CGT	C	527.94	PASS	AB=0.864;AC=3;AF=0.054;AN=56;BaseQRankSum=2.757;DP=685;FS=12.904;HRun=0;HaplotypeScore=88.6318;InbreedingCoeff=0.5428;MQ=57.46;MQ0=5;MQRankSum=-4.468;QD=11.73;ReadPosRankSum=-3.115;VQSLOD=1.5341;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,114,1764	0/0:7,0:7:17.24:0,17,212	0/0:27,0:10:8.92:0,9,75	0/0:19,0:6:7.04:0,7,66	0/0:24,0:24:63.20:0,63,1041	0/0:23,0:23:59.91:0,60,913	0/0:32,0:32:83.74:0,84,1306	1/1:20,6:26:29.50:431,29,0	0/0:18,0:18:51.16:0,51,837	0/0:37,0:37:99:0,102,1504	0/0:18,0:18:45.14:0,45,732	0/0:26,0:26:72.23:0,72,1183	0/0:25,0:25:75.16:0,75,1121	0/0:26,0:26:76.41:0,76,1158	0/0:17,0:17:48.14:0,48,768	0/0:17,0:17:51.15:0,51,816	0/0:41,0:41:99:0,117,1894	0/1:16,3:19:80.93:203,0,81	0/0:13,0:13:32.43:0,32,419	0/0:23,0:23:65.51:0,66,948	0/0:46,0:46:99:0,123,1926	0/0:21,0:21:56.66:0,57,868	0/0:24,0:24:68.25:0,68,1099	0/0:35,0:35:83.66:0,84,1198	0/0:20,0:20:54.17:0,54,879	0/0:26,0:26:69.22:0,69,1137	0/0:24,0:24:67.39:0,67,933	0/0:4,0:4:6.02:0,6,100
chr10	68809157	.	GCT	G	813.14	PASS	AB=0.979;AC=41;AF=0.759;AN=54;BaseQRankSum=6.466;DP=644;FS=12.111;HRun=0;HaplotypeScore=146.0450;InbreedingCoeff=0.2912;MQ=55.04;MQ0=24;MQRankSum=-4.075;QD=1.58;ReadPosRankSum=2.634;VQSLOD=2.1092;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:37:24.59:0,25,376	1/1:6,0:6:5.68:28,6,0	./.	0/0:36,0:17:3:0,3,28	0/1:25,0:24:8.89:9,0,198	1/1:18,0:18:5.68:29,6,0	1/1:17,1:18:3.46:26,3,0	0/0:26,0:23:1.99:0,2,9	1/1:25,0:24:10.89:51,11,0	1/1:14,8:22:19.34:168,19,0	1/1:16,6:22:3.01:33,3,0	1/1:21,0:20:9.41:45,9,0	1/1:18,0:18:7.23:32,7,0	1/1:22,0:20:7.50:34,7,0	1/1:23,0:24:5.68:29,6,0	1/1:34,0:34:19.41:95,19,0	1/1:22,0:22:2.68:11,3,0	0/0:2,0:2:1.82:0,2,5	1/1:24,0:18:4.69:35,5,0	1/1:20,0:20:5.68:29,6,0	0/1:28,0:26:0:0,0,0	1/1:19,0:19:1.55:5,2,0	0/1:22,3:25:22.28:22,0,110	0/1:24,0:23:37.91:38,0,362	1/1:25,0:26:5.68:28,6,0	1/1:26,0:26:20.88:128,21,0	1/1:32,0:32:15.76:76,16,0	0/1:12,0:9:0:0,0,0
chr10	68809161	.	TCTCTCTCTCTCTCTCTCTCTCTCTCTCA	T	7510.91	PASS	AB=0.994;AC=25;AF=0.463;AN=54;BaseQRankSum=8.963;DP=661;FS=5.984;HRun=0;HaplotypeScore=343.1814;InbreedingCoeff=0.3583;MQ=54.30;MQ0=28;MQRankSum=-6.566;QD=20.98;ReadPosRankSum=4.853;VQSLOD=1.7174;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:39:55.71:0,56,4202	1/1:5,1:6:6.02:373,6,0	./.	0/0:35,0:16:5.38:0,5,45	0/0:29,0:28:33.09:0,33,2602	1/1:18,0:18:6.02:313,6,0	1/1:15,0:15:3.90:77,4,0	0/0:26,0:23:9.87:0,10,129	1/1:28,0:27:12.04:619,12,0	0/0:24,0:23:36.48:0,36,1933	0/0:27,0:27:9.03:0,9,758	1/1:21,0:19:12.04:616,12,0	0/1:16,0:16:12.94:448,0,13	1/1:21,1:20:15.05:656,15,0	0/1:23,1:24:9.95:360,0,10	0/1:31,0:31:0.89:1064,0,1	0/1:24,0:23:62.90:146,0,63	0/0:2,0:2:2.97:0,3,20	0/1:27,0:21:99:190,0,113	1/1:21,0:20:6.02:313,6,0	0/0:27,0:25:8.38:0,8,60	0/1:20,0:20:10.98:161,0,11	0/0:28,0:28:17.40:0,17,1928	0/0:27,0:25:57.17:0,57,3930	1/1:23,1:24:9.03:443,9,0	0/1:28,0:28:88.40:684,0,88	1/1:31,2:33:17.57:1048,18,0	0/0:11,0:7:5.21:0,5,30
chr10	68809163	.	TCTCTCTCTCTCTCTCTCTCTCTCTCA	T	9951.77	PASS	AB=0.658;AC=35;AF=0.648;AN=54;BaseQRankSum=9.466;DP=658;FS=19.430;HRun=0;HaplotypeScore=312.8932;InbreedingCoeff=0.6770;MQ=53.13;MQ0=28;MQRankSum=-5.127;QD=25.32;ReadPosRankSum=4.780;VQSLOD=1.7932;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:39:48.14:0,48,3706	1/1:5,1:6:6.02:385,6,0	./.	0/0:34,0:15:5.38:0,5,37	0/0:32,0:31:32.60:0,33,2511	1/1:6,13:19:6.02:405,6,0	1/1:13,0:13:6.02:89,6,0	0/0:26,0:23:6.47:0,6,78	1/1:10,17:26:12.04:805,12,0	0/0:25,0:24:30.54:0,31,1901	0/0:26,0:26:12.04:0,12,934	1/1:7,14:19:12.04:795,12,0	1/1:6,11:17:9.03:596,9,0	1/1:11,11:20:15.05:888,15,0	1/1:6,19:25:7.57:409,8,0	1/1:6,23:29:21.07:1413,21,0	0/1:12,13:24:38.91:193,0,39	0/0:2,0:2:2.90:0,3,16	1/1:15,11:20:28.96:447,29,0	1/1:8,12:19:6.02:405,6,0	1/1:27,0:25:0.47:1,0,0	1/1:5,15:20:3.01:193,3,0	0/0:28,0:28:17.09:0,17,1793	0/0:27,0:25:54.17:0,54,3379	1/1:9,14:23:9.03:522,9,0	1/1:8,21:29:53.74:1201,54,0	1/1:12,21:33:18.32:1165,18,0	1/1:11,0:7:3.01:40,3,0
chr10	68809189	.	ACT	A	342.95	PASS	AB=1.000;AC=27;AF=0.482;AN=56;BaseQRankSum=8.526;DP=568;FS=17.269;HRun=0;HaplotypeScore=130.7190;InbreedingCoeff=0.3736;MQ=52.85;MQ0=32;MQRankSum=-6.779;QD=1.26;ReadPosRankSum=6.787;VQSLOD=0.7223;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,3:22:6.37:0,6,475	1/1:4,0:4:5.11:26,5,0	0/0:45,0:12:0.15:0,0,165	0/0:77,0:21:31.55:0,32,309	0/0:21,4:25:9.46:0,9,437	0/1:18,0:18:16.25:18,0,16	0/0:15,0:15:0.28:0,0,1	0/0:14,0:11:4.16:0,4,48	1/1:19,0:18:10.89:49,11,0	0/1:23,0:22:15.80:16,0,244	0/0:18,0:18:24.68:0,25,294	1/1:16,0:14:9.41:42,9,0	1/1:11,0:11:6.88:30,7,0	1/1:13,0:12:7.46:32,7,0	1/1:20,0:21:5.68:27,6,0	1/1:24,0:24:20.30:92,20,0	0/1:17,0:16:4.21:4,0,14	0/0:5,0:5:0:0,0,0	1/1:15,0:12:1.67:12,2,0	1/1:12,0:13:5.68:27,6,0	0/0:22,0:20:0:0,0,0	1/1:16,0:16:1.55:4,2,0	0/0:16,0:16:35.81:0,36,485	0/0:25,0:23:19.10:0,19,192	0/1:16,0:16:10.33:18,0,10	0/1:23,0:23:8.65:39,0,9	1/1:23,0:23:16.02:73,16,0	0/0:10,0:4:2.96:0,3,19
chr10	68810357	.	CA	C	544.18	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.333;DP=509;FS=9.215;HRun=7;HaplotypeScore=53.8319;InbreedingCoeff=0.9231;MQ=73.03;MQ0=0;MQRankSum=-0.813;QD=20.93;ReadPosRankSum=-1.077;VQSLOD=2.2040;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,129,1610	0/0:4,0:4:9.03:0,9,113	0/0:22,0:22:41.08:0,41,503	0/0:14,0:11:21.78:0,22,264	0/0:17,0:17:45.14:0,45,558	0/0:12,0:12:30.10:0,30,377	0/0:31,0:31:87.22:0,87,1063	1/1:2,9:11:24.03:238,24,0	0/0:21,0:21:57.17:0,57,703	0/0:16,0:16:42.13:0,42,528	0/0:21,0:21:60.19:0,60,754	0/0:16,0:16:45.13:0,45,553	0/0:18,0:18:48.15:0,48,601	0/0:17,0:17:48.15:0,48,604	0/0:16,0:16:45.13:0,45,553	0/0:14,0:14:33.11:0,33,415	0/0:32,0:32:90.29:0,90,1126	1/1:1,14:15:42.09:427,42,0	0/0:8,0:8:21.07:0,21,264	0/0:18,0:18:51.16:0,51,641	0/0:40,0:40:99:0,114,1434	0/0:4,0:4:12.04:0,12,151	0/0:9,0:9:27.07:0,27,326	0/0:12,0:12:27.09:0,27,340	0/0:19,0:19:51.13:0,51,613	0/0:26,0:26:69.22:0,69,868	0/0:27,0:26:75.20:0,75,922	0/0:3,0:3:9.03:0,9,113
chr10	68810466	.	GAACCA	G	4099.63	PASS	AB=1.000;AC=43;AF=0.768;AN=56;BaseQRankSum=4.970;DP=325;FS=6.588;HRun=0;HaplotypeScore=80.0039;InbreedingCoeff=0.5640;MQ=70.57;MQ0=20;MQRankSum=-6.249;QD=18.38;ReadPosRankSum=3.379;VQSLOD=2.6206;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:8:21.03:0,21,518	1/1:3,0:3:3.01:56,3,0	0/0:69,0:17:27.17:0,27,128	0/1:74,0:27:21.88:22,0,282	0/0:6,0:6:12.04:0,12,337	1/1:7,0:7:18.03:269,18,0	1/1:14,0:14:14.98:190,15,0	0/1:6,0:6:13.96:100,0,14	1/1:6,0:6:11.97:184,12,0	1/1:5,2:7:14.85:157,15,0	1/1:2,1:3:3.01:51,3,0	1/1:7,0:7:17.82:225,18,0	1/1:4,0:4:9.03:161,9,0	1/1:7,0:5:9.01:85,9,0	1/1:5,0:4:12.04:166,12,0	1/1:9,0:9:20.18:225,20,0	1/1:13,0:13:29.96:460,30,0	1/1:6,3:9:24.01:315,24,0	1/1:1,0:1:2.98:21,3,0	1/1:8,0:8:14.98:207,15,0	1/1:4,0:4:2.16:17,2,0	1/1:3,0:3:6.02:84,6,0	0/0:9,0:9:23.99:0,24,497	0/0:10,0:10:30.10:0,30,729	1/1:11,0:11:23.60:329,24,0	1/1:9,0:9:24.02:369,24,0	0/1:7,0:7:1:199,0,1	1/1:5,0:4:12.04:208,12,0
chr10	68810473	.	ACC	A	940.87	PASS	AB=0.685;AC=23;AF=0.411;AN=56;BaseQRankSum=9.237;DP=357;FS=1.156;HRun=2;HaplotypeScore=92.2961;InbreedingCoeff=-0.0913;MQ=71.65;MQ0=17;MQRankSum=-6.171;QD=6.53;ReadPosRankSum=7.691;VQSLOD=-0.1609;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:27.09:0,27,513	0/1:1,1:2:13.92:14,0,14	0/0:67,2:23:52.20:0,52,772	0/0:75,0:28:63.75:0,64,808	0/0:7,1:8:17.78:0,18,336	1/1:2,5:7:15.80:132,16,0	0/1:13,3:16:38.31:38,0,109	0/0:12,0:11:27.89:0,28,351	0/1:2,3:5:5.83:47,0,6	0/0:7,0:7:7.85:0,8,112	1/1:3,0:3:0.70:3,1,0	1/1:2,6:7:0.06:93,0,0	0/1:2,3:5:33.36:43,0,33	0/1:4,3:5:24.62:46,0,25	0/1:1,5:5:15.89:66,0,16	1/1:4,5:9:1.45:85,1,0	0/1:5,8:13:61.04:129,0,61	0/1:9,0:9:8.53:9,0,95	0/0:2,0:2:5.60:0,6,36	0/1:7,4:11:32.12:32,0,119	0/0:5,0:5:3.80:0,4,18	0/1:0,3:3:17.40:17,0,27	0/0:10,0:10:27.02:0,27,489	0/0:13,0:13:33.11:0,33,648	0/1:7,7:14:75.34:116,0,75	0/1:5,6:11:71.72:88,0,72	0/1:7,4:11:56.34:56,0,86	1/1:0,4:4:11.94:89,12,0
chr10	68810476	.	AAAC	A	914.32	PASS	AB=0.782;AC=22;AF=0.393;AN=56;BaseQRankSum=9.159;DP=370;FS=7.053;HRun=0;HaplotypeScore=102.6491;InbreedingCoeff=-0.2201;MQ=72.73;MQ0=17;MQRankSum=-6.860;QD=5.79;ReadPosRankSum=8.703;VQSLOD=0.4822;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:30.10:0,30,663	0/1:1,1:2:14.52:19,0,15	0/0:68,0:25:55.38:0,55,774	0/0:77,0:29:67.43:0,67,886	0/0:9,0:9:22.32:0,22,460	1/1:3,4:7:17.54:118,18,0	0/1:14,2:16:33.61:34,0,101	0/0:14,0:13:34.36:0,34,484	0/1:3,3:6:20:59,0,20	0/1:7,0:7:32.17:32,0,52	1/1:2,0:2:2.75:13,3,0	0/1:7,2:8:34.99:61,0,35	0/1:4,3:7:51.98:52,0,69	0/1:6,1:5:13.63:20,0,14	0/1:4,2:5:13.89:55,0,14	0/1:6,2:8:4.10:47,0,4	0/1:9,7:16:91.39:141,0,91	0/1:9,0:9:30.71:31,0,48	0/0:3,0:3:7.74:0,8,48	0/1:9,3:12:37.16:37,0,149	0/0:4,0:4:4.56:0,5,16	0/1:1,2:3:19.95:20,0,22	0/0:10,0:10:27.08:0,27,606	0/0:13,0:13:33.11:0,33,812	0/1:9,5:14:99:99,0,113	0/1:6,6:12:69.04:115,0,69	0/1:9,2:11:37.88:38,0,87	1/1:1,3:4:11.60:92,12,0
chr10	68810503	.	A	AC	483.40	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-1.600;DP=322;FS=31.475;HRun=1;HaplotypeScore=92.9901;InbreedingCoeff=0.7522;MQ=75.43;MQ0=1;MQRankSum=-4.825;QD=25.44;ReadPosRankSum=-1.081;VQSLOD=1.6752;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:51.15:0,51,629	0/0:3,0:3:2.88:0,3,15	0/0:24,0:21:39.67:0,40,407	0/0:25,0:16:21.91:0,22,300	0/0:10,0:10:30.07:0,30,349	0/0:9,0:9:20.17:0,20,159	0/0:16,0:16:33.11:0,33,272	1/1:2,17:18:54.09:578,54,0	0/0:8,0:8:20.33:0,20,156	0/0:10,0:10:28.90:0,29,239	0/0:8,0:7:19.50:0,20,120	0/0:9,0:9:22.91:0,23,177	0/0:10,0:10:28.61:0,29,203	0/0:7,0:5:11.74:0,12,91	0/0:9,0:9:23.69:0,24,208	0/0:12,0:12:29.78:0,30,270	0/0:17,0:17:43.08:0,43,327	0/0:7,0:7:14.33:0,14,88	0/0:12,0:12:32.24:0,32,311	0/0:10,0:10:27.05:0,27,219	0/0:6,0:6:11.47:0,11,106	0/0:7,0:7:20.81:0,21,184	0/0:8,0:8:24.06:0,24,286	0/0:14,0:14:42.02:0,42,486	0/0:13,0:13:32.46:0,32,205	0/0:15,0:15:41.62:0,42,363	0/0:12,0:12:26.66:0,27,238	0/0:4,0:4:11.74:0,12,71
chr10	68810505	.	G	GAA	10798.95	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=0.636;DP=346;FS=3.819;HRun=2;HaplotypeScore=71.9060;InbreedingCoeff=0.9409;MQ=75.64;MQ0=1;MQRankSum=-6.508;QD=42.85;ReadPosRankSum=-0.836;VQSLOD=4.5621;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:48.15:0,48,687	1/1:0,4:4:3.01:55,3,0	0/0:23,0:21:49.34:0,49,601	0/0:18,0:14:20.91:0,21,428	0/0:9,0:9:24.06:0,24,333	1/1:2,7:9:21.07:377,21,0	1/1:2,16:18:38.87:683,39,0	1/1:9,18:25:69.24:1123,69,0	1/1:0,8:8:21.07:390,21,0	1/1:2,8:10:30.10:538,30,0	1/1:2,7:8:24.04:406,24,0	1/1:0,9:9:24.08:441,24,0	1/1:0,10:10:30.10:553,30,0	1/1:0,7:7:12.04:225,12,0	1/1:0,8:8:24.08:448,24,0	1/1:2,11:13:29.89:519,30,0	1/1:2,15:17:38.49:678,38,0	1/1:4,3:7:17.99:268,18,0	1/1:6,9:16:42.14:762,42,0	1/1:3,10:13:35.82:556,36,0	1/1:1,6:7:11.78:224,12,0	1/1:2,8:11:29.93:417,30,0	0/0:11,0:11:30.07:0,30,403	0/0:14,0:14:42.14:0,42,616	1/1:1,13:15:33.32:570,33,0	1/1:0,14:14:42.14:785,42,0	1/1:1,14:15:30.10:559,30,0	1/1:0,4:4:12.04:224,12,0
chr10	68810531	.	T	TCCACAG	1780.40	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-3.710;DP=393;FS=3.409;HRun=0;HaplotypeScore=112.3030;InbreedingCoeff=0.9576;MQ=81.96;MQ0=1;MQRankSum=-6.688;QD=71.22;ReadPosRankSum=-2.133;VQSLOD=3.7808;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:54.19:0,54,1234	0/0:7,0:7:18.06:0,18,411	0/0:21,0:21:57.18:0,57,1141	0/0:9,0:8:15:0,15,198	0/0:15,0:15:39.13:0,39,886	0/0:14,0:14:36.12:0,36,801	0/0:18,0:18:36.11:0,36,777	1/1:10,10:20:48.12:1506,48,0	0/0:13,0:13:36.12:0,36,822	0/0:10,0:10:30.06:0,30,600	0/0:15,0:14:39.13:0,39,889	0/0:9,0:9:21.07:0,21,479	0/0:14,0:14:40.02:0,40,890	0/0:12,0:11:21.07:0,21,460	0/0:11,0:11:33.11:0,33,754	0/0:15,0:15:36.11:0,36,780	0/0:17,0:17:36.12:0,36,819	1/1:1,3:4:12.04:391,12,0	0/0:17,0:17:48.12:0,48,969	0/0:21,0:21:57.20:0,57,1277	0/0:10,0:10:24.05:0,24,526	0/0:14,0:14:39.13:0,39,891	0/0:12,0:12:33.11:0,33,754	0/0:19,0:19:54.19:0,54,1231	0/0:15,0:15:33.11:0,33,754	0/0:14,0:14:36.12:0,36,823	0/0:22,0:22:51.18:0,51,1149	0/0:5,0:5:15.05:0,15,341
chr10	68811124	.	C	CTT	3974.66	PASS	AB=0.903;AC=37;AF=0.661;AN=56;BaseQRankSum=2.250;DP=409;FS=0.597;HRun=14;HaplotypeScore=77.7326;InbreedingCoeff=0.5975;MQ=62.86;MQ0=18;MQRankSum=-5.111;QD=12.70;ReadPosRankSum=-2.258;VQSLOD=2.1831;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:21,1:26:8.93:9,0,267	1/1:3,1:5:4.26:42,4,0	0/0:11,0:8:5.53:0,6,50	0/0:13,0:11:8.33:0,8,52	0/0:12,0:13:20.29:0,20,162	1/1:9,8:19:28.78:301,29,0	0/1:12,2:16:21.85:188,0,22	0/1:14,0:13:0:0,0,0	1/1:9,5:15:28.38:285,28,0	0/0:11,0:12:8.48:0,8,104	0/0:10,0:11:2.17:0,2,65	1/1:6,7:11:12.92:140,13,0	1/1:6,7:13:23.85:231,24,0	1/1:12,5:16:28.24:307,28,0	1/1:4,3:7:8.39:87,8,0	1/1:7,5:13:26.45:311,26,0	1/1:8,14:25:44.69:417,45,0	0/1:6,0:6:0:0,0,0	1/1:15,6:21:29.98:317,30,0	0/1:13,2:14:10.07:120,0,10	1/1:6,5:9:12.03:143,12,0	1/1:8,0:11:10.71:72,11,0	0/0:16,0:16:11.36:0,11,100	0/0:13,0:15:35.17:0,35,261	1/1:8,3:13:17.99:191,18,0	1/1:7,5:11:23.78:195,24,0	1/1:14,1:19:22.06:203,22,0	1/1:3,11:14:33.10:416,33,0
chr10	68811303	.	TTTATTA	T	2637.18	PASS	AC=24;AF=0.632;AN=38;BaseQRankSum=-0.787;DP=233;FS=3.380;HRun=0;HaplotypeScore=47.9978;InbreedingCoeff=0.7031;MQ=69.11;MQ0=1;MQRankSum=-4.818;QD=21.79;ReadPosRankSum=2.395;VQSLOD=2.5315;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:7:8.98:0,9,124	./.	./.	./.	0/0:4,0:4:6.02:0,6,165	1/1:5,8:13:12.04:244,12,0	./.	0/0:18,0:27:35.70:0,36,398	1/1:5,3:8:6.02:125,6,0	./.	0/0:7,0:7:0.47:0,0,1	1/1:3,2:5:3.01:62,3,0	./.	1/1:6,2:8:6.02:125,6,0	1/1:1,5:6:12.04:225,12,0	./.	1/1:6,16:22:24.04:456,24,0	0/0:10,0:15:14.97:0,15,236	1/1:10,5:14:15.05:294,15,0	1/1:3,6:9:14.97:228,15,0	./.	./.	0/0:8,0:8:3.01:0,3,98	0/0:6,0:6:6.02:0,6,135	1/1:3,3:6:6.02:125,6,0	1/1:7,5:11:12.04:250,12,0	1/1:5,0:5:6:86,6,0	1/1:2,10:12:27.09:562,27,0
chr10	68812733	.	A	AT	1068.20	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=-7.256;DP=500;FS=10.539;HRun=8;HaplotypeScore=45.4304;InbreedingCoeff=0.7061;MQ=75.45;MQ0=1;MQRankSum=0.395;QD=22.25;ReadPosRankSum=-4.855;VQSLOD=1.1484;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:54.03:0,54,494	0/0:6,0:6:18:0,18,160	0/0:13,0:12:9.02:0,9,151	0/1:9,0:8:30.04:30,0,43	0/0:28,0:28:72.03:0,72,659	0/0:16,0:16:45.02:0,45,412	0/0:15,0:15:45.01:0,45,407	1/1:2,28:30:81.23:924,81,0	0/0:19,0:19:48.01:0,48,439	0/0:24,0:24:66.03:0,66,604	0/0:21,0:21:48.01:0,48,439	0/0:11,0:11:33.02:0,33,302	0/0:22,0:22:57.03:0,57,522	0/0:19,0:19:51.01:0,51,467	0/0:13,0:13:3.86:0,4,264	0/0:12,0:12:30.01:0,30,275	0/0:15,0:15:36.01:0,36,329	1/1:0,9:9:21.06:242,21,0	0/0:28,0:28:25.44:0,25,480	0/0:22,0:22:54.02:0,54,494	0/0:8,0:8:24.01:0,24,219	0/0:9,0:9:27.01:0,27,247	0/0:24,0:24:69.04:0,69,632	0/0:14,0:14:36.01:0,36,329	0/0:23,0:23:66.04:0,66,604	0/0:27,0:27:66.03:0,66,604	0/0:35,0:34:99:0,102,923	0/0:8,0:8:24.01:0,24,220
chr10	68816039	.	CA	C	611.71	PASS	AB=0.889;AC=5;AF=0.089;AN=56;BaseQRankSum=6.007;DP=609;FS=23.225;HRun=9;HaplotypeScore=62.0108;InbreedingCoeff=0.7957;MQ=78.51;MQ0=0;MQRankSum=-2.349;QD=13.02;ReadPosRankSum=-2.555;VQSLOD=1.0111;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:63.13:0,63,692	0/1:7,1:8:3.41:3,0,208	0/0:17,0:15:35.72:0,36,392	0/0:25,0:25:45.10:0,45,430	0/0:32,0:32:93.28:0,93,1072	0/0:17,0:17:48.13:0,48,545	0/0:19,0:19:39.10:0,39,439	1/1:4,19:22:22.41:459,22,0	0/0:26,0:26:66.20:0,66,760	0/0:20,0:20:54.15:0,54,608	0/0:20,0:20:60.17:0,60,681	0/0:24,0:24:66.20:0,66,762	0/0:34,0:34:90.21:0,90,999	0/0:27,0:27:72.21:0,72,830	0/0:20,0:21:53.98:0,54,593	0/0:15,0:15:45.13:0,45,519	0/0:27,1:28:53.76:0,54,861	1/1:4,12:16:28.73:272,29,0	0/0:13,1:14:5.63:0,6,319	0/0:15,0:15:39.07:0,39,415	0/0:16,0:16:39.12:0,39,450	0/0:17,0:18:50.96:0,51,550	0/0:8,0:9:23.90:0,24,257	0/0:30,0:30:69.21:0,69,796	0/0:20,0:20:51.13:0,51,572	0/0:39,0:39:99:0,102,1143	0/0:36,0:36:87.26:0,87,1002	0/0:14,0:14:41.96:0,42,465
chr10	68819683	.	AAAT	A	2198	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.605;DP=690;FS=1.774;HRun=0;HaplotypeScore=94.1903;InbreedingCoeff=0.9968;MQ=68.68;MQ0=0;MQRankSum=-2.447;QD=41.47;ReadPosRankSum=-5.230;VQSLOD=2.7699;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,120,2604	0/0:16,0:16:48.16:0,48,1051	0/0:14,0:14:26.93:0,27,560	0/0:18,0:17:20.14:0,20,715	0/0:34,0:34:93.31:0,93,1991	0/0:20,0:20:57.18:0,57,1208	0/0:18,0:18:48.16:0,48,1037	1/1:2,39:41:99:1747,117,0	0/0:18,0:18:54.19:0,54,1164	0/0:24,0:24:63.20:0,63,1303	0/0:35,0:35:99:0,105,2281	0/0:16,0:16:42.13:0,42,878	0/0:30,0:30:78.25:0,78,1666	0/0:31,0:31:90.27:0,90,1827	0/0:25,0:25:72.23:0,72,1535	0/0:21,0:21:63.22:0,63,1364	0/0:22,0:22:60.18:0,60,1272	1/1:0,12:12:36.12:572,36,0	0/0:25,0:24:69.24:0,69,1496	0/0:36,0:36:87.30:0,87,1882	0/0:26,0:26:72.17:0,72,1490	0/0:28,0:28:78.27:0,78,1689	0/0:20,0:20:60.21:0,60,1304	0/0:17,0:17:51.15:0,51,1070	0/0:20,0:20:60.21:0,60,1314	0/0:28,0:28:78.26:0,78,1658	0/0:25,0:24:75.22:0,75,1544	0/0:25,0:25:75.26:0,75,1644
chr10	68820979	.	T	TA	791.02	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-8.703;DP=528;FS=7.876;HRun=8;HaplotypeScore=49.9574;InbreedingCoeff=0.9658;MQ=65.62;MQ0=0;MQRankSum=-0.765;QD=22.60;ReadPosRankSum=-4.443;VQSLOD=1.8181;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:69:0,69,622	0/0:6,0:6:18.01:0,18,165	0/0:15,0:12:21.01:0,21,192	0/0:11,0:11:23.72:0,24,209	0/0:27,0:27:78.04:0,78,713	0/0:6,0:6:15.01:0,15,137	0/0:19,0:19:54.02:0,54,489	1/1:7,28:35:81.12:886,81,0	0/0:16,0:16:42.02:0,42,384	0/0:27,0:27:69.03:0,69,631	0/0:23,0:23:59.99:0,60,540	0/0:19,0:19:51.03:0,51,467	0/0:13,0:13:39.02:0,39,355	0/0:19,0:19:50.99:0,51,458	0/0:23,0:23:47.98:0,48,435	0/0:14,0:14:39.02:0,39,357	0/0:24,0:23:66.03:0,66,600	0/0:13,0:13:30.01:0,30,275	0/0:21,0:19:39.02:0,39,357	0/0:24,0:24:51.01:0,51,467	0/0:16,0:16:36.01:0,36,329	0/0:16,0:16:39.01:0,39,357	0/0:17,0:17:48.03:0,48,439	0/0:10,0:10:20.99:0,21,188	0/0:16,0:16:41.94:0,42,374	0/0:30,0:30:84.04:0,84,769	0/0:22,0:22:60.02:0,60,546	0/0:16,0:16:45.02:0,45,412
chr10	68821311	.	CAT	C	606.42	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.086;DP=673;FS=0.911;HRun=0;HaplotypeScore=76.4907;InbreedingCoeff=0.9995;MQ=68.07;MQ0=0;MQRankSum=-1.248;QD=27.56;ReadPosRankSum=1.415;VQSLOD=4.4258;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,105,1904	0/0:16,0:16:45.14:0,45,810	0/0:20,0:20:32.64:0,33,840	0/0:16,0:15:36.07:0,36,599	0/0:35,0:35:99:0,105,1932	0/0:19,0:19:57.20:0,57,1067	0/0:15,0:15:42.14:0,42,753	0/0:43,0:43:99:0,129,2284	0/0:22,0:22:63.20:0,63,1138	0/0:27,0:27:78.27:0,78,1448	0/0:21,0:21:63.20:0,63,1140	0/0:15,0:15:45.15:0,45,843	0/0:18,0:18:51.15:0,51,892	0/0:25,0:25:75.26:0,75,1386	0/0:21,0:21:60.21:0,60,1103	0/0:27,0:27:81.28:0,81,1501	0/0:34,0:34:99:0,99,1820	1/1:2,20:22:48.16:701,48,0	0/0:33,0:33:90.29:0,90,1600	0/0:24,0:24:69.24:0,69,1281	0/0:19,0:19:54.16:0,54,947	0/0:23,0:23:69.22:0,69,1251	0/0:25,0:25:75.24:0,75,1304	0/0:16,0:16:48.16:0,48,899	0/0:26,0:26:75.24:0,75,1344	0/0:33,0:33:96.33:0,96,1784	0/0:26,0:26:72.25:0,72,1297	0/0:17,0:17:47.75:0,48,835
chr10	68822487	.	GAA	G	8083.45	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=14.400;DP=506;FS=3.890;HRun=11;HaplotypeScore=120.7398;InbreedingCoeff=0.9796;MQ=66.37;MQ0=0;MQRankSum=-9.968;QD=23.71;ReadPosRankSum=1.777;VQSLOD=4.2838;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:36.04:0,36,468	1/1:2,6:8:21:200,21,0	0/0:12,0:12:23.20:0,23,241	0/0:8,0:7:11.52:0,12,75	0/0:37,0:38:91.60:0,92,1333	1/1:4,12:17:8.33:349,8,0	1/1:1,8:9:24.05:244,24,0	1/1:5,23:28:72.09:726,72,0	1/1:4,14:18:48.05:469,48,0	0/0:18,0:19:50.66:0,51,747	0/0:21,0:22:60.15:0,60,877	1/1:5,14:19:45.03:445,45,0	1/1:4,12:16:42.05:406,42,0	1/1:2,11:13:36:338,36,0	1/1:0,16:16:41.98:393,42,0	1/1:4,13:17:39.05:383,39,0	1/1:5,10:15:30.01:297,30,0	1/1:7,8:15:20.99:213,21,0	1/1:6,8:14:29.98:295,30,0	1/1:4,25:29:74.45:706,74,0	1/1:3,10:13:25.32:256,25,0	1/1:3,6:9:20.16:207,20,0	0/0:31,0:31:87.23:0,87,1237	0/0:18,0:19:53.66:0,54,761	1/1:2,13:15:42.05:409,42,0	1/1:7,16:23:36.29:574,36,0	1/1:4,22:26:65.43:622,65,0	1/1:3,18:21:54.09:552,54,0
chr10	68822500	.	C	CA	14526.76	PASS	AB=1.000;AC=41;AF=0.732;AN=56;BaseQRankSum=14.051;DP=501;FS=10.179;HRun=0;HaplotypeScore=102.6383;InbreedingCoeff=0.9014;MQ=66.42;MQ0=0;MQRankSum=-9.595;QD=41.74;ReadPosRankSum=1.469;VQSLOD=4.3661;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:45.10:0,45,575	1/1:1,6:7:18.06:276,18,0	0/1:13,0:12:13.82:14,0,214	0/0:11,0:9:9.97:0,10,177	0/0:37,0:37:99:0,108,1446	1/1:2,16:18:54.03:775,54,0	1/1:1,12:13:36.12:563,36,0	1/1:3,28:31:90.31:1408,90,0	1/1:0,15:15:45.15:685,45,0	0/0:21,0:21:63.21:0,63,879	0/0:20,0:20:57.19:0,57,796	1/1:1,15:16:48.16:726,48,0	1/1:2,12:14:39.11:563,39,0	1/1:1,12:13:39.13:583,39,0	1/1:0,17:17:48.16:711,48,0	1/1:1,13:14:42.14:635,42,0	1/1:2,12:14:28.83:542,29,0	1/1:0,9:9:27.09:420,27,0	1/1:3,9:12:36.11:543,36,0	1/1:0,30:30:90.30:1342,90,0	1/1:0,12:12:30.10:450,30,0	1/1:1,9:10:27.09:416,27,0	0/0:31,0:31:93.31:0,93,1294	0/0:17,0:17:48.15:0,48,671	1/1:1,15:16:45.15:690,45,0	1/1:2,19:21:21.24:900,21,0	1/1:1,30:31:90.28:1351,90,0	1/1:2,20:22:60.20:933,60,0
chr10	68822543	.	GA	G	9346.74	PASS	AB=0.564;AC=39;AF=0.696;AN=56;BaseQRankSum=12.227;DP=545;FS=0.364;HRun=8;HaplotypeScore=104.6034;InbreedingCoeff=0.9292;MQ=79.44;MQ0=0;MQRankSum=-6.974;QD=25.06;ReadPosRankSum=0.189;VQSLOD=4.4947;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:17:48.13:0,48,567	1/1:0,6:6:18.03:174,18,0	0/0:28,0:26:28.99:0,29,546	0/0:21,0:19:25.73:0,26,295	0/0:25,0:25:72.22:0,72,869	1/1:2,12:14:36.06:347,36,0	1/1:0,14:14:33.05:319,33,0	1/1:2,23:25:69.07:654,69,0	1/1:2,18:20:54.09:521,54,0	0/0:20,0:20:57.10:0,57,661	0/0:20,0:20:48.15:0,48,579	1/1:2,16:18:45.07:434,45,0	1/1:4,18:22:54.07:521,54,0	1/1:1,13:14:39.06:376,39,0	1/1:1,20:21:54.08:520,54,0	1/1:1,12:13:39.05:370,39,0	1/1:0,17:17:48.08:463,48,0	1/1:1,18:19:51.08:492,51,0	1/1:2,19:21:57.09:550,57,0	1/1:2,31:33:93.15:897,93,0	1/1:0,12:12:36.06:346,36,0	1/1:2,22:24:63.09:604,63,0	0/0:25,0:25:63.19:0,63,761	0/0:15,0:15:42.11:0,42,494	1/1:1,13:14:39.06:376,39,0	0/1:5,17:22:3.81:435,0,4	1/1:4,30:34:90.12:860,90,0	1/1:6,4:10:9.28:87,9,0
chr10	68822829	.	CAGAATT	C	21408.63	PASS	AB=0.519;AC=39;AF=0.696;AN=56;BaseQRankSum=15.854;DP=636;FS=3.250;HRun=0;HaplotypeScore=152.0036;InbreedingCoeff=0.9020;MQ=87.23;MQ0=0;MQRankSum=-18.349;QD=52.47;ReadPosRankSum=1.047;VQSLOD=4.9456;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:84.29:0,84,2826	1/1:1,7:8:15.05:321,15,0	0/0:28,0:28:69.24:0,69,2158	0/0:29,0:29:82.83:0,83,2564	0/0:42,0:42:99:0,123,4309	1/1:1,21:22:45.15:1062,45,0	1/1:3,18:22:42.14:917,42,0	1/1:7,28:35:84.29:1950,84,0	1/1:3,19:22:51.17:1204,51,0	0/0:29,0:29:84.29:0,84,2896	0/0:19,0:19:54.19:0,54,1822	1/1:2,23:25:54.04:1275,54,0	1/1:1,15:16:39.13:901,39,0	1/1:1,20:21:48.16:1133,48,0	1/1:1,37:38:93.32:2195,93,0	1/1:1,24:25:69.24:1596,69,0	1/1:0,14:14:27.09:617,27,0	1/1:1,7:8:18.06:391,18,0	1/1:3,11:14:33.10:718,33,0	1/1:1,21:22:54.19:1275,54,0	1/1:0,12:12:12.04:249,12,0	1/1:0,19:19:42.14:991,42,0	0/0:25,0:25:75.26:0,75,2625	0/0:26,0:26:72.20:0,72,2444	1/1:1,23:24:45.15:1062,45,0	0/1:2,26:28:99:1711,0,130	1/1:3,26:29:66.23:1558,66,0	1/1:0,4:4:12.04:283,12,0
chr10	68824116	.	T	TG	19287.42	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-16.772;DP=660;FS=0.322;HRun=1;HaplotypeScore=57.2590;InbreedingCoeff=0.9994;MQ=84.00;MQ0=1;MQRankSum=-3.887;QD=41.21;ReadPosRankSum=1.781;VQSLOD=5.3251;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:90.26:0,90,1138	1/1:0,9:9:24.08:358,24,0	0/0:14,0:14:42.14:0,42,545	0/0:25,0:25:65.12:0,65,779	0/0:31,0:31:93.30:0,93,1208	1/1:0,23:23:66.22:989,66,0	1/1:0,16:16:45.15:675,45,0	1/1:0,34:34:99:1508,102,0	1/1:1,18:19:48.16:718,48,0	0/0:31,0:31:90.25:0,90,1150	0/0:23,0:23:63.20:0,63,818	1/1:1,16:17:42.14:630,42,0	1/1:0,25:25:72.24:1079,72,0	1/1:3,30:33:90.30:1339,90,0	1/1:0,25:25:75.25:1124,75,0	1/1:1,21:22:57.19:854,57,0	1/1:0,25:25:72.24:1078,72,0	1/1:0,16:16:45.11:649,45,0	1/1:2,25:27:81.24:1169,81,0	1/1:2,29:31:81.27:1214,81,0	1/1:1,31:31:84.28:1259,84,0	1/1:1,20:21:60.20:899,60,0	0/0:16,0:16:45.15:0,45,584	0/0:21,0:21:60.14:0,60,745	1/1:0,12:12:33.11:495,33,0	1/1:3,33:36:27.42:1406,27,0	1/1:2,27:29:75.19:1124,75,0	1/1:0,16:16:48.16:719,48,0
chr10	68824217	.	G	GT	1213.71	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-2.843;DP=581;FS=0.000;HRun=9;HaplotypeScore=56.8578;InbreedingCoeff=0.9642;MQ=71.07;MQ0=0;MQRankSum=-2.527;QD=21.29;ReadPosRankSum=-3.392;VQSLOD=2.9308;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:53.98:0,54,469	0/0:9,0:9:23.99:0,24,208	0/0:10,0:10:20.82:0,21,169	0/0:10,0:9:8.72:0,9,64	0/0:23,0:24:61.98:0,62,519	0/0:27,0:27:74.96:0,75,647	0/0:17,0:17:47.99:0,48,417	1/1:15,18:33:60.15:650,60,0	0/0:25,0:25:71.95:0,72,618	0/0:32,0:32:80.97:0,81,703	0/0:25,0:26:77.02:0,77,657	0/0:21,0:21:59.99:0,60,521	0/0:21,0:22:50:0,50,419	0/0:21,0:21:50.96:0,51,439	0/0:15,0:15:44.96:0,45,385	0/0:15,0:15:41.98:0,42,365	0/0:31,0:31:86.95:0,87,751	1/1:4,20:24:63.15:686,63,0	0/0:23,0:24:61.98:0,62,517	0/0:28,1:30:46.84:0,47,624	0/0:16,0:16:47.95:0,48,407	0/0:14,0:14:41.99:0,42,365	0/0:20,0:20:50.96:0,51,443	0/0:13,0:13:22.06:0,22,273	0/0:18,0:18:47.94:0,48,410	0/0:23,0:23:56.97:0,57,495	0/0:26,0:26:62.98:0,63,547	0/0:15,0:15:35.90:0,36,297
chr10	68827910	.	T	TAA	2700.32	PASS	AB=0.730;AC=40;AF=0.714;AN=56;BaseQRankSum=1.315;DP=316;FS=11.434;HRun=14;HaplotypeScore=53.1794;InbreedingCoeff=0.2841;MQ=58.81;MQ0=27;MQRankSum=-0.111;QD=10.67;ReadPosRankSum=-0.323;VQSLOD=0.8085;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:9:5.90:0,6,92	1/1:0,2:2:6.02:79,6,0	0/1:13,0:7:5.43:5,0,26	0/1:9,0:6:20.85:21,0,26	0/0:20,0:19:44.50:0,44,357	1/1:4,7:14:15.04:175,15,0	1/1:1,1:3:5.38:48,5,0	0/1:12,0:15:10.60:39,0,11	0/1:2,2:6:11.13:82,0,11	0/1:6,1:11:31.07:70,0,31	0/1:8,0:16:1.31:48,0,1	1/1:2,5:8:15.05:196,15,0	1/1:7,4:10:20.49:209,20,0	0/1:5,4:11:3.36:176,0,3	1/1:2,1:5:14.32:116,14,0	1/1:0,5:7:15.04:174,15,0	1/1:10,4:9:18:204,18,0	0/1:5,1:16:24.45:73,0,24	1/1:15,2:16:3.97:147,4,0	1/1:2,6:9:15.04:174,15,0	1/1:0,3:4:8.39:87,8,0	1/1:0,3:4:12.04:154,12,0	0/0:10,0:11:22.94:0,23,156	0/0:15,0:14:26.86:0,27,224	1/1:2,7:10:14.40:155,14,0	1/1:10,4:14:14.86:147,15,0	1/1:4,4:10:17.41:183,17,0	1/1:7,0:5:14.43:113,14,0
chr10	68831727	.	AT	A	12855.98	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=12.656;DP=661;FS=8.814;HRun=5;HaplotypeScore=66.5136;InbreedingCoeff=0.9731;MQ=89.09;MQ0=0;MQRankSum=-4.487;QD=30.04;ReadPosRankSum=4.991;VQSLOD=5.0223;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,129,1726	1/1:0,9:9:27.08:306,27,0	0/0:23,0:23:69.20:0,69,896	0/0:24,0:25:69.16:0,69,872	0/0:16,0:16:48.16:0,48,656	1/1:0,28:28:75.21:851,75,0	1/1:1,20:21:57.16:647,57,0	0/0:28,0:28:84.27:0,84,1133	1/1:2,24:26:63.18:711,63,0	0/0:24,0:24:66.20:0,66,874	0/0:17,0:17:48.04:0,48,617	1/1:1,25:26:66.19:748,66,0	1/1:0,25:25:60.17:680,60,0	1/1:1,20:21:57.16:647,57,0	1/1:2,22:24:66.19:749,66,0	1/1:0,28:28:78.10:885,78,0	1/1:2,48:50:99:1463,129,0	0/0:23,0:23:66.19:0,66,884	1/1:1,12:13:36.10:408,36,0	1/1:1,14:15:42.12:476,42,0	1/1:0,41:41:99:1258,111,0	1/1:0,14:14:39.11:442,39,0	0/0:16,0:16:48.16:0,48,655	0/0:17,0:17:48.15:0,48,641	1/1:1,15:16:39.11:442,39,0	1/1:2,27:29:5.12:815,5,0	1/1:2,36:38:99:1224,108,0	1/1:1,3:4:9.03:102,9,0
chr10	68832655	.	GTATTCATC	G	23559.64	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=14.125;DP=572;FS=6.362;HRun=0;HaplotypeScore=179.7772;InbreedingCoeff=0.9526;MQ=81.49;MQ0=0;MQRankSum=-14.925;QD=55.05;ReadPosRankSum=2.237;VQSLOD=4.4872;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:87.30:0,87,3630	1/1:0,1:1:3.01:81,3,0	0/0:20,0:20:39.13:0,39,1465	0/0:30,0:28:66.23:0,66,2501	0/0:25,0:25:75.26:0,75,3113	1/1:3,18:21:39.13:1057,39,0	1/1:10,13:23:30.10:803,30,0	1/1:11,22:33:65.95:1391,66,0	1/1:4,21:25:45.15:1219,45,0	1/1:0,17:17:51.12:1272,51,0	1/1:4,15:19:30.10:812,30,0	1/1:3,20:23:57.20:1543,57,0	1/1:5,17:22:42.14:1138,42,0	1/1:0,17:17:51.18:1382,51,0	1/1:2,15:17:39.13:1056,39,0	1/1:6,22:28:60.21:1624,60,0	1/1:3,7:10:18.06:488,18,0	1/1:1,6:6:12.04:325,12,0	1/1:10,13:23:39.10:996,39,0	1/1:2,22:24:60.21:1607,60,0	1/1:6,12:18:14.61:395,15,0	1/1:2,18:20:42.14:1125,42,0	0/0:13,0:13:33.11:0,33,1372	0/0:21,0:21:54.19:0,54,2246	1/1:2,21:23:54.19:1463,54,0	1/1:4,24:27:69.18:1752,69,0	1/1:2,20:22:57.20:1545,57,0	1/1:1,6:7:18.06:488,18,0
chr10	68833734	.	TG	T	20103.44	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=17.897;DP=798;FS=6.975;HRun=1;HaplotypeScore=104.8845;InbreedingCoeff=0.9976;MQ=93.75;MQ0=0;MQRankSum=-6.425;QD=38.96;ReadPosRankSum=7.321;VQSLOD=4.0421;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,111,1770	1/1:0,18:18:48.16:671,48,0	0/0:36,0:36:99:0,105,1571	0/0:32,0:32:89.43:0,89,1397	0/0:22,0:22:66.17:0,66,962	1/1:0,22:22:66.22:923,66,0	1/1:0,38:38:99:1510,108,0	0/0:31,0:31:93.28:0,93,1419	1/1:0,37:37:99:1467,105,0	0/0:35,0:35:99:0,102,1609	0/0:15,0:15:45.10:0,45,668	1/1:0,30:30:75.25:1049,75,0	1/1:0,29:29:84.28:1174,84,0	1/1:0,37:37:99:1468,105,0	1/1:0,42:42:99:1468,105,0	1/1:0,37:37:99:1426,102,0	1/1:0,27:27:78.26:1091,78,0	0/0:16,0:16:45.15:0,45,719	1/1:0,23:23:69.20:939,69,0	1/1:0,25:25:69.23:965,69,0	1/1:0,56:56:99:2177,157,0	1/1:0,20:20:57.19:797,57,0	0/0:19,0:19:57.19:0,57,911	0/0:39,0:39:99:0,114,1768	1/1:0,26:26:72.24:1007,72,0	1/1:0,18:18:51.17:713,51,0	1/1:0,25:25:75.25:1049,75,0	1/1:0,6:6:15.05:210,15,0
chr10	68834692	.	C	CT	3496.44	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=12.874;DP=512;FS=6.070;HRun=11;HaplotypeScore=191.1545;InbreedingCoeff=0.8952;MQ=57.47;MQ0=1;MQRankSum=-12.735;QD=9.63;ReadPosRankSum=-2.816;VQSLOD=0.1561;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:71.52:0,72,537	1/1:11,0:11:20:87,20,0	0/0:17,0:14:15.24:0,15,123	0/0:10,1:9:0.39:0,0,67	0/0:22,1:24:39.30:0,39,373	1/1:29,0:29:54.98:248,55,0	1/1:18,0:18:43.71:196,44,0	1/1:15,8:26:35.93:294,36,0	1/1:10,0:10:16.67:76,17,0	0/0:14,0:14:6.62:0,7,206	0/0:22,0:22:41.76:0,42,318	1/1:11,0:11:22.06:99,22,0	1/1:20,0:20:47.43:221,47,0	1/1:12,0:12:21.34:93,21,0	1/1:19,0:19:38.93:179,39,0	1/1:20,0:20:38.84:178,39,0	1/1:9,0:9:16.73:77,17,0	1/1:4,10:14:20.14:253,20,0	1/1:18,0:18:33.30:156,33,0	1/1:29,0:29:60.77:262,61,0	1/1:9,0:9:5.71:32,6,0	1/1:22,0:22:53.93:237,54,0	0/0:13,0:14:31.85:0,32,231	0/0:14,0:16:39.82:0,40,278	1/1:27,0:27:61.26:279,61,0	1/1:28,0:28:38.40:249,38,0	1/1:28,0:28:55.52:256,56,0	1/1:3,0:3:5.60:26,6,0
chr10	68834698	.	T	TTTC	12461.92	PASS	AB=1.000;AC=35;AF=0.625;AN=56;BaseQRankSum=10.025;DP=484;FS=7.126;HRun=0;HaplotypeScore=174.1691;InbreedingCoeff=0.9016;MQ=53.16;MQ0=2;MQRankSum=-12.545;QD=42.97;ReadPosRankSum=0.462;VQSLOD=5.9827;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:87.18:0,87,1260	1/1:9,0:9:20.05:285,20,0	0/0:22,0:14:28.57:0,29,337	0/0:15,0:9:16.36:0,16,217	0/0:24,0:24:59.38:0,59,895	1/1:16,6:22:60.11:1123,60,0	1/1:14,3:17:47.86:836,48,0	0/0:24,0:25:47.06:0,47,282	1/1:10,0:10:16.74:369,17,0	0/0:16,0:16:45.99:0,46,618	0/0:21,0:21:57.15:0,57,806	1/1:9,1:10:23.96:437,24,0	1/1:15,2:17:50.84:875,51,0	1/1:7,2:9:17.49:394,17,0	1/1:15,3:18:44.84:750,45,0	1/1:16,3:19:49.78:833,50,0	1/1:9,1:10:6.97:329,7,0	0/0:13,0:13:28.87:0,29,196	1/1:10,5:15:23.72:570,24,0	1/1:25,1:26:75.10:1230,75,0	0/1:5,0:5:7.13:58,0,7	1/1:20,2:22:48.30:1005,48,0	0/0:14,0:14:39.11:0,39,558	0/0:15,0:15:45.13:0,45,659	1/1:27,0:27:76.65:1089,77,0	1/1:19,4:23:19.69:1116,20,0	1/1:26,3:29:60.95:1050,61,0	1/1:1,1:2:6.02:114,6,0
chr10	68834700	.	T	TC	2954.81	PASS	AB=0.753;AC=33;AF=0.589;AN=56;BaseQRankSum=10.795;DP=474;FS=7.012;HRun=0;HaplotypeScore=188.5644;InbreedingCoeff=0.4515;MQ=52.82;MQ0=3;MQRankSum=-10.804;QD=9.38;ReadPosRankSum=2.380;VQSLOD=3.3425;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:87.19:0,87,1112	0/1:3,5:8:30.76:43,0,31	0/0:25,0:15:25.55:0,26,296	0/0:16,0:10:22.86:0,23,218	0/0:25,0:25:72.10:0,72,883	1/1:6,14:20:35.23:222,35,0	1/1:4,12:16:16.55:158,17,0	0/1:24,0:24:10.56:11,0,174	1/1:4,6:10:9.17:154,9,0	0/0:16,0:16:46.36:0,46,561	0/0:20,0:20:60.15:0,60,738	1/1:3,7:10:6.89:103,7,0	1/1:4,13:17:15.83:215,16,0	1/1:4,4:8:2.07:84,2,0	1/1:8,9:17:9.80:146,10,0	1/1:7,10:17:10.64:182,11,0	0/1:4,6:10:0.14:84,0,0	0/1:13,0:13:26.92:27,0,32	1/1:5,9:14:14.95:253,15,0	1/1:4,21:25:58.70:274,59,0	0/1:4,1:5:6.10:6,0,15	0/1:6,16:22:2.39:179,0,2	0/0:13,0:13:39.06:0,39,487	0/0:15,0:15:45.03:0,45,556	0/1:10,16:26:21.62:288,0,22	1/1:6,17:23:4.14:335,4,0	1/1:12,16:28:4.70:356,5,0	1/1:1,1:2:5.01:27,5,0
chr10	68834703	.	T	TTTAA	14629.11	PASS	AB=0.632;AC=35;AF=0.625;AN=56;BaseQRankSum=14.202;DP=474;FS=4.452;HRun=0;HaplotypeScore=187.4148;InbreedingCoeff=0.9085;MQ=50.27;MQ0=5;MQRankSum=-12.726;QD=52.06;ReadPosRankSum=-1.801;VQSLOD=5.0920;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:81.11:0,81,1275	1/1:0,5:8:24.08:447,24,0	0/0:26,0:16:23.69:0,24,361	0/0:18,0:11:16.45:0,16,229	0/0:24,0:24:65.57:0,66,1039	1/1:6,14:20:60.14:1042,60,0	1/1:3,12:17:46.76:881,47,0	0/0:15,0:15:7.80:0,8,167	1/1:3,6:9:24.05:466,24,0	0/0:17,0:16:18.84:0,19,659	0/0:21,0:21:57.14:0,57,879	1/1:4,6:10:27.07:500,27,0	1/1:2,13:17:51.17:1026,51,0	1/1:5,4:9:25.31:407,25,0	1/1:8,9:19:48.10:816,48,0	1/1:5,10:16:48.16:864,48,0	0/1:5,6:12:2.76:401,0,3	0/0:13,0:13:10.45:0,10,159	1/1:4,9:13:36.05:700,36,0	1/1:2,21:24:69.23:1350,69,0	1/1:2,1:5:11.99:146,12,0	1/1:5,16:22:66.22:1232,66,0	0/0:14,0:14:39.07:0,39,553	0/0:14,0:14:42.12:0,42,641	1/1:3,16:24:71.97:1316,72,0	1/1:10,17:27:27.50:1578,27,0	1/1:9,15:27:69.22:1338,69,0	1/1:1,1:2:6.02:119,6,0
chr10	68834717	.	A	ATG	306.51	PASS	AB=0.940;AC=4;AF=0.071;AN=56;BaseQRankSum=-0.894;DP=482;FS=21.970;HRun=0;HaplotypeScore=213.7113;InbreedingCoeff=0.0290;MQ=47.45;MQ0=10;MQRankSum=-4.750;QD=4.44;ReadPosRankSum=-4.400;VQSLOD=0.4864;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:33.19:0,33,624	0/0:9,0:9:16.14:0,16,68	0/0:33,0:16:20.04:0,20,254	0/0:30,0:13:17.43:0,17,169	0/0:19,0:20:41.96:0,42,490	0/0:16,0:16:16.27:0,16,70	0/0:14,1:15:10.78:0,11,45	0/1:13,6:19:3.90:298,0,4	0/0:9,0:9:16.97:0,17,77	0/0:20,0:18:37.66:0,38,437	0/0:19,0:19:51.14:0,51,614	0/1:11,0:11:20.31:61,0,20	0/0:14,0:14:21.78:0,22,96	0/0:8,0:8:6.91:0,7,32	0/0:15,0:15:18.18:0,18,83	0/0:13,0:13:10.71:0,11,45	0/0:13,1:14:16.06:0,16,67	0/0:14,0:14:1.98:0,2,20	0/1:12,0:11:18.15:18,0,23	0/0:27,0:27:29.46:0,29,126	0/0:5,0:5:2.37:0,2,11	0/0:24,0:24:34.39:0,34,143	0/0:13,0:13:36.10:0,36,431	0/0:15,0:15:35.43:0,35,396	0/0:20,0:20:34.88:0,35,149	0/1:27,0:27:36.53:37,0,104	0/0:27,0:27:47.36:0,47,196	0/0:1,0:1:2.68:0,3,11
chr10	68834723	.	GTGTGTGTGTA	G	13624.94	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=13.616;DP=514;FS=0.886;HRun=0;HaplotypeScore=225.9308;InbreedingCoeff=0.9652;MQ=45.97;MQ0=12;MQRankSum=-10.282;QD=47.15;ReadPosRankSum=4.570;VQSLOD=4.4700;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:57.54:0,58,2334	1/1:4,6:10:21.07:629,21,0	0/0:34,0:15:29.89:0,30,912	0/0:29,0:12:24.07:0,24,786	0/0:23,0:23:54.18:0,54,2201	1/1:13,5:18:24.08:663,24,0	1/1:11,5:16:17.33:476,17,0	0/0:20,0:20:30.03:0,30,807	1/1:2,8:10:24.08:758,24,0	0/0:20,0:18:43.70:0,44,1927	0/0:21,0:21:63.21:0,63,2472	1/1:1,11:12:15.05:359,15,0	1/1:7,7:14:24.08:732,24,0	1/1:1,7:8:12.04:372,12,0	1/1:2,13:15:27.09:853,27,0	1/1:5,8:13:12.04:379,12,0	1/1:11,7:18:29.56:710,30,0	0/0:15,0:15:20.05:0,20,437	1/1:11,3:13:18.06:416,18,0	1/1:10,18:28:33.11:1042,33,0	1/1:6,1:7:6.02:145,6,0	1/1:5,20:25:38.63:1231,39,0	0/0:16,0:16:45.15:0,45,1932	0/0:15,0:15:35.67:0,36,1363	1/1:8,13:21:42.14:1283,42,0	1/1:6,21:27:63.13:1586,63,0	1/1:3,23:26:54.19:1704,54,0	1/1:6,1:7:15.05:289,15,0
chr10	68836140	.	T	TA	9780.18	PASS	AB=1.000;AC=37;AF=0.661;AN=56;BaseQRankSum=-13.761;DP=550;FS=2.008;HRun=8;HaplotypeScore=53.1788;InbreedingCoeff=0.9201;MQ=76.65;MQ0=0;MQRankSum=-1.006;QD=27.47;ReadPosRankSum=1.362;VQSLOD=5.4435;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:69.03:0,69,631	1/1:2,10:12:24.07:277,24,0	0/1:13,0:13:12.71:13,0,137	0/0:15,0:15:13.91:0,14,174	0/0:34,0:36:99:0,102,890	1/1:0,28:28:81.24:935,81,0	1/1:1,11:12:27.08:312,27,0	0/0:27,0:27:66.01:0,66,601	1/1:1,19:20:48.14:554,48,0	0/0:26,0:26:69.03:0,69,628	0/0:14,0:14:39.02:0,39,357	1/1:5,12:17:33.10:381,33,0	1/1:5,19:24:57.17:657,57,0	1/1:2,15:17:36.11:416,36,0	1/1:3,20:23:60.18:692,60,0	1/1:2,18:20:51.15:589,51,0	1/1:3,28:31:75.18:851,75,0	0/0:16,0:16:42.02:0,42,384	1/1:5,21:26:66.13:728,66,0	1/1:2,14:16:39.12:450,39,0	1/1:1,14:15:42.12:485,42,0	1/1:2,11:13:30.09:346,30,0	0/0:17,0:17:39.01:0,39,357	0/0:17,0:17:51.03:0,51,467	1/1:2,18:20:54.16:623,54,0	1/1:3,13:16:39.10:434,39,0	1/1:0,26:26:69.21:796,69,0	1/1:0,7:7:21.06:242,21,0
chr10	68837167	.	GACA	G	11048.42	PASS	AB=0.659;AC=35;AF=0.625;AN=56;BaseQRankSum=16.973;DP=647;FS=11.850;HRun=0;HaplotypeScore=210.7782;InbreedingCoeff=0.9008;MQ=62.06;MQ0=5;MQRankSum=-9.562;QD=31.48;ReadPosRankSum=3.788;VQSLOD=3.6669;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:90.31:0,90,1730	1/1:1,3:4:9.03:149,9,0	0/0:38,0:31:92.90:0,93,1194	0/0:43,0:38:40.32:0,40,1070	0/0:9,0:9:27.09:0,27,482	1/1:8,5:13:24.08:368,24,0	1/1:24,5:29:57.14:785,57,0	0/0:27,0:27:72.24:0,72,1131	1/1:19,9:28:59.51:781,60,0	0/0:34,0:34:96.32:0,96,1714	0/0:14,0:14:39.13:0,39,751	1/1:13,6:20:47.48:685,47,0	1/1:17,16:33:70.60:1054,71,0	1/1:11,7:18:45.12:650,45,0	1/1:12,13:25:59.61:806,60,0	1/1:15,15:30:78.18:1127,78,0	1/1:14,1:15:32.80:458,33,0	0/0:32,0:32:59.89:0,60,831	1/1:19,3:18:42.09:569,42,0	1/1:2,2:4:8.24:102,8,0	1/1:27,3:30:32.77:504,33,0	1/1:8,4:12:30.08:426,30,0	0/0:22,0:22:66.14:0,66,1243	0/0:47,0:47:99:0,138,2767	1/1:5,10:15:36.12:547,36,0	0/1:13,14:27:71.92:901,0,72	1/1:10,12:22:63.19:955,63,0	1/1:4,0:4:12.04:183,12,0
chr10	68837169	.	C	CA	6808.92	PASS	AB=0.967;AC=35;AF=0.625;AN=56;BaseQRankSum=18.609;DP=660;FS=18.597;HRun=2;HaplotypeScore=218.8893;InbreedingCoeff=0.8985;MQ=61.50;MQ0=5;MQRankSum=-10.531;QD=18.71;ReadPosRankSum=1.694;VQSLOD=2.3640;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:90.26:0,90,1098	1/1:3,0:3:7.14:40,7,0	0/0:40,0:33:93.21:0,93,1072	0/0:39,0:36:34.37:0,34,847	0/0:9,0:9:27.08:0,27,335	1/1:14,0:13:26.75:194,27,0	1/1:27,2:30:56.74:517,57,0	0/0:27,0:27:78.23:0,78,946	1/1:26,2:28:62.41:475,62,0	0/0:34,0:34:93.29:0,93,1142	0/0:13,0:13:39.12:0,39,482	1/1:20,1:22:50.69:420,51,0	1/1:37,1:38:89.64:762,90,0	1/1:18,1:19:44.70:382,45,0	1/1:21,2:23:59.70:519,60,0	1/1:27,2:29:77.35:632,77,0	1/1:16,1:17:35.09:314,35,0	0/0:33,0:33:26.80:0,27,305	1/1:19,3:18:50.76:444,51,0	1/1:2,1:3:8.98:86,9,0	1/1:29,1:30:38.25:296,38,0	1/1:13,1:14:35.91:340,36,0	0/0:22,0:22:57.74:0,58,740	0/0:46,1:47:99:0,138,1693	1/1:16,0:16:35.73:307,36,0	0/1:28,1:29:31.23:471,0,31	1/1:22,1:23:62.51:517,63,0	1/1:4,0:4:11.95:92,12,0
chr10	68837170	.	A	AG	10430.95	PASS	AB=0.696;AC=36;AF=0.643;AN=56;BaseQRankSum=17.412;DP=656;FS=18.023;HRun=0;HaplotypeScore=205.4472;InbreedingCoeff=0.7919;MQ=61.81;MQ0=5;MQRankSum=-8.591;QD=26.68;ReadPosRankSum=3.845;VQSLOD=2.5794;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:90.30:0,90,1257	1/1:3,0:3:9:96,9,0	0/0:42,1:36:99:0,102,1278	0/0:41,0:36:35.76:0,36,947	0/0:9,0:9:27.09:0,27,378	1/1:7,6:12:8.19:319,8,0	1/1:14,17:31:45.27:762,45,0	0/0:26,0:26:78.26:0,78,1091	1/1:13,14:27:64.24:818,64,0	0/0:34,0:34:96.32:0,96,1329	0/0:13,0:13:39.13:0,39,545	1/1:10,11:21:34.45:647,34,0	1/1:25,12:37:82.79:1024,83,0	1/1:10,7:17:27.74:560,28,0	1/1:15,7:22:59.82:766,60,0	1/1:19,10:29:78.21:1013,78,0	1/1:4,13:17:35.85:477,36,0	0/1:10,0:34:14.64:15,0,308	1/1:13,7:17:46.33:585,46,0	1/1:3,0:3:8.24:77,8,0	1/1:8,22:30:30.77:543,31,0	1/1:8,6:14:33.15:420,33,0	0/0:22,0:22:66.14:0,66,882	0/0:47,0:47:99:0,138,1929	1/1:14,2:16:3.38:428,3,0	0/1:22,7:29:59.94:868,0,60	1/1:14,9:23:48.42:826,48,0	1/1:0,4:4:12.04:189,12,0
chr10	68837195	.	ACTGC	A	8722.12	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=18.640;DP=581;FS=32.142;HRun=0;HaplotypeScore=227.6948;InbreedingCoeff=0.9692;MQ=69.95;MQ0=1;MQRankSum=-14.081;QD=28.50;ReadPosRankSum=3.499;VQSLOD=3.1502;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:80.03:0,80,1675	1/1:2,2:4:12.03:162,12,0	0/0:28,0:24:68.98:0,69,1541	0/0:36,0:34:62.14:0,62,1392	0/0:10,0:10:30.09:0,30,673	1/1:7,5:12:27.63:315,28,0	1/1:19,5:24:63.14:780,63,0	0/0:35,0:35:99:0,99,2032	1/1:17,8:26:69.40:817,69,0	0/0:29,0:29:87.30:0,87,2126	0/0:10,0:10:30.09:0,30,676	1/1:9,7:16:42.57:548,43,0	1/1:16,16:32:76.89:903,77,0	1/1:9,6:15:40.96:490,41,0	1/1:9,13:22:53.54:648,54,0	1/1:14,15:29:68.55:921,69,0	1/1:15,1:16:40.24:474,40,0	0/0:31,0:31:57.20:0,57,1171	1/1:8,3:11:29.16:278,29,0	1/1:6,2:8:10.52:103,11,0	1/1:17,3:20:13.20:119,13,0	1/1:8,4:12:21.34:205,21,0	0/0:16,0:16:48.12:0,48,1185	0/0:51,0:51:99:0,150,3594	1/1:5,9:14:33.10:373,33,0	1/1:8,14:22:36.23:793,36,0	1/1:8,12:20:53.74:696,54,0	1/1:3,0:3:6.02:94,6,0
chr10	68837201	.	AGCCAG	A	12275.56	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=17.300;DP=636;FS=25.209;HRun=0;HaplotypeScore=242.2497;InbreedingCoeff=0.9783;MQ=71.50;MQ0=0;MQRankSum=-13.001;QD=36.21;ReadPosRankSum=4.607;VQSLOD=3.3417;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,111,3216	1/1:2,2:4:12.04:217,12,0	0/0:29,0:27:80.24:0,80,2375	0/0:35,0:33:82.35:0,82,2406	0/0:11,0:11:33.11:0,33,1042	1/1:8,5:13:22.13:420,22,0	1/1:21,5:26:55.65:1064,56,0	0/0:36,0:36:99:0,99,3097	1/1:17,8:26:75.18:1246,75,0	0/0:39,0:39:99:0,117,3641	0/0:14,0:14:39.61:0,40,1149	1/1:10,6:17:34.93:710,35,0	1/1:20,16:36:61.48:1257,61,0	1/1:11,6:17:41.51:711,42,0	1/1:10,13:23:57.05:899,57,0	1/1:15,15:30:69.24:1280,69,0	1/1:17,1:18:36.25:705,36,0	0/0:31,0:31:66.23:0,66,2045	1/1:9,4:13:27.38:446,27,0	1/1:8,2:10:11.90:146,12,0	1/1:24,3:27:16.57:225,17,0	1/1:10,4:14:18.90:303,19,0	0/0:16,0:16:48.15:0,48,1478	0/0:48,0:48:99:0,144,4720	1/1:5,9:14:22.33:443,22,0	1/1:11,14:25:68.71:1132,69,0	1/1:10,12:22:55.16:924,55,0	1/1:4,0:4:8.99:147,9,0
chr10	68837205	.	AG	A	9238.16	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=18.802;DP=648;FS=27.339;HRun=1;HaplotypeScore=208.1540;InbreedingCoeff=0.9804;MQ=72.43;MQ0=0;MQRankSum=-13.435;QD=26.55;ReadPosRankSum=8.657;VQSLOD=1.5572;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,101,1612	1/1:3,1:4:11.99:112,12,0	0/0:33,0:33:91.13:0,91,1286	0/0:32,1:32:80.21:0,80,1172	0/0:13,0:13:36.12:0,36,568	1/1:5,8:12:30.04:333,30,0	1/1:5,22:27:66.17:828,66,0	0/0:35,0:35:96.30:0,96,1503	1/1:9,17:26:75.11:860,75,0	0/0:39,0:39:99:0,117,1861	0/0:14,0:14:36.59:0,37,570	1/1:6,10:17:45.07:510,45,0	1/1:16,20:36:93.17:1087,93,0	1/1:6,11:17:45.09:536,45,0	1/1:13,11:24:50.44:539,50,0	1/1:15,15:30:69.09:746,69,0	1/1:1,17:18:42.13:534,42,0	0/0:31,0:31:69.23:0,69,1088	1/1:4,9:13:36.09:449,36,0	1/1:2,9:11:12.03:147,12,0	1/1:3,27:30:16.90:208,17,0	1/1:4,10:14:27.08:349,27,0	0/0:15,0:15:42.14:0,42,666	0/0:51,0:51:99:0,153,2403	1/1:9,6:15:33.04:372,33,0	1/1:14,13:27:78.13:878,78,0	1/1:12,10:22:57.06:630,57,0	1/1:0,4:4:9.03:121,9,0
chr10	68837495	.	CCTCACACAGATGACACACGGGCT	C	25387.54	PASS	AB=1.000;AC=22;AF=0.393;AN=56;BaseQRankSum=16.800;DP=577;FS=4.611;HRun=0;HaplotypeScore=418.0992;InbreedingCoeff=-0.2567;MQ=88.68;MQ0=0;MQRankSum=-14.730;QD=68.06;ReadPosRankSum=5.909;VQSLOD=2.8865;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,123,12210	0/1:8,0:8:59.88:622,0,60	0/0:30,0:30:75.26:0,75,4662	0/0:25,0:26:69.24:0,69,4664	0/0:29,0:29:80.31:0,80,7524	0/1:12,0:12:13.85:977,0,14	0/1:11,0:11:39.19:643,0,39	1/1:11,10:21:27.07:1388,27,0	0/1:27,0:27:73.45:2284,0,73	0/0:27,0:27:78.27:0,78,7043	0/0:14,0:14:39.13:0,39,3460	0/1:34,0:34:82.49:2481,0,82	0/1:20,0:20:67.42:1474,0,67	0/1:28,0:28:41.31:2490,0,41	0/1:22,0:22:11.88:2531,0,12	0/1:19,0:19:75.38:1600,0,75	0/1:19,0:19:18.26:1208,0,18	0/1:26,0:26:84.56:85,0,7169	0/1:14,0:14:95.97:961,0,96	0/1:17,0:17:83.18:648,0,83	0/1:20,0:20:33.62:510,0,34	1/1:14,0:14:11.65:1088,12,0	0/0:12,0:12:36.12:0,36,3506	0/0:25,0:25:69.17:0,69,6566	0/1:20,0:20:0.07:2017,0,0	0/1:21,0:21:99:1119,0,866	0/1:16,0:16:76.47:797,0,76	0/1:4,0:4:1.25:466,0,1
chr10	68837498	.	CACACA	C	2705.89	PASS	AB=0.667;AC=19;AF=0.339;AN=56;BaseQRankSum=16.968;DP=543;FS=0.726;HRun=0;HaplotypeScore=274.8286;InbreedingCoeff=-0.3688;MQ=88.67;MQ0=0;MQRankSum=-15.173;QD=8.99;ReadPosRankSum=8.834;VQSLOD=1.3935;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,126,4084	0/1:4,4:8:58.84:59,0,216	0/0:27,0:27:81.28:0,81,2549	0/0:25,0:25:72.25:0,72,2333	0/0:29,0:29:83.84:0,84,2703	0/1:5,6:11:99:133,0,118	0/1:7,4:11:68.48:68,0,238	1/1:10,0:10:21.06:246,21,0	0/1:13,14:27:99:259,0,629	0/0:26,0:26:78.27:0,78,2443	0/0:13,0:13:39.13:0,39,1262	0/1:15,16:31:99:228,0,588	0/1:11,9:20:99:164,0,538	0/1:12,15:27:99:293,0,481	0/1:6,16:22:99:283,0,171	0/1:8,10:18:99:192,0,356	0/1:8,9:17:99:118,0,216	0/0:24,1:25:47.85:0,48,2371	0/1:7,6:13:99:156,0,304	0/1:11,4:15:80.61:81,0,310	0/0:16,4:20:3.63:0,4,245	0/1:5,7:12:95.24:95,0,103	0/0:12,0:12:36.12:0,36,1199	0/0:23,0:23:69.17:0,69,2142	0/1:5,13:18:66.34:198,0,66	0/1:14,7:21:99:162,0,746	0/1:11,5:16:74.79:75,0,484	0/1:1,3:4:43.93:62,0,44
chr10	68837504	.	GATGACA	G	5067.24	PASS	AB=0.651;AC=20;AF=0.357;AN=56;BaseQRankSum=17.673;DP=514;FS=1.164;HRun=0;HaplotypeScore=269.8564;InbreedingCoeff=-0.4008;MQ=94.05;MQ0=0;MQRankSum=-15.416;QD=17.78;ReadPosRankSum=10.145;VQSLOD=2.6582;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,132,4867	0/1:4,4:8:99:125,0,163	0/0:30,0:31:90.75:0,91,2877	0/0:27,0:27:78.26:0,78,2502	0/0:29,0:29:83.84:0,84,3042	0/1:3,6:9:79.69:216,0,80	0/1:6,4:10:99:130,0,179	1/1:10,0:10:21.07:289,21,0	0/1:10,14:24:99:462,0,517	0/0:25,0:25:75.26:0,75,2782	0/0:12,0:12:36.12:0,36,1271	0/1:10,16:26:99:494,0,374	0/1:8,9:17:99:294,0,473	0/1:11,15:26:99:520,0,413	0/1:4,16:20:99:505,0,124	0/1:5,10:15:99:347,0,258	0/1:5,9:14:99:224,0,144	0/0:24,1:25:36:0,36,2603	0/1:5,6:11:99:213,0,229	0/1:9,4:13:99:130,0,203	0/1:15,4:19:33.67:34,0,161	0/1:4,7:11:99:196,0,100	0/0:14,0:14:42.14:0,42,1526	0/0:22,0:22:66.23:0,66,2426	0/1:5,13:18:41.10:398,0,41	0/1:10,7:17:99:232,0,725	0/1:8,5:13:99:156,0,413	0/1:1,3:4:55.71:102,0,56
chr10	68837515	.	GGCTCTCGGCCGA	G	14627.11	PASS	AB=0.850;AC=37;AF=0.661;AN=56;BaseQRankSum=16.589;DP=383;FS=10.265;HRun=0;HaplotypeScore=241.3078;InbreedingCoeff=0.7299;MQ=100.30;MQ0=0;MQRankSum=-16.363;QD=76.18;ReadPosRankSum=7.210;VQSLOD=3.2332;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,129,8054	1/1:0,4:4:12.04:393,12,0	0/0:26,0:26:78.27:0,78,4054	0/0:21,0:22:23.03:0,23,2586	0/0:27,0:27:77.59:0,78,4512	1/1:0,6:6:18.06:606,18,0	1/1:0,4:4:12.04:397,12,0	0/1:10,0:10:35.51:36,0,201	1/1:2,13:15:33.80:1373,34,0	0/0:26,0:26:78.27:0,78,4491	0/0:11,0:11:33.11:0,33,2083	1/1:0,16:16:48.16:1538,48,0	1/1:0,9:9:27.09:890,27,0	1/1:1,15:16:41.06:1485,41,0	1/1:0,16:16:48.16:1527,48,0	1/1:0,10:10:30.10:999,30,0	1/1:0,9:9:24.08:726,24,0	0/1:24,1:25:27.49:27,0,4356	1/1:0,6:6:18.06:609,18,0	1/1:0,4:4:12.04:395,12,0	1/1:0,4:4:12.04:276,12,0	1/1:0,7:7:21.07:648,21,0	0/0:15,0:15:45.15:0,45,2523	0/0:21,0:21:63.22:0,63,3991	1/1:0,13:13:39.13:1222,39,0	0/1:3,7:10:99:680,0,286	1/1:0,5:5:15.05:498,15,0	1/1:0,3:3:9.03:301,9,0
chr10	68838006	.	CTG	C	22371.18	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=16.343;DP=699;FS=19.208;HRun=0;HaplotypeScore=133.7542;InbreedingCoeff=0.9984;MQ=87.27;MQ0=0;MQRankSum=-8.181;QD=44.39;ReadPosRankSum=4.405;VQSLOD=4.3383;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:91.39:0,91,2127	1/1:0,7:7:18.06:293,18,0	0/0:33,0:33:96.31:0,96,1851	0/0:22,0:22:51.05:0,51,1144	0/0:17,0:17:51.18:0,51,1034	1/1:0,17:17:45.15:734,45,0	1/1:0,22:22:57.19:929,57,0	1/1:0,36:36:99:1616,102,0	1/1:0,21:21:63.22:1027,63,0	0/0:19,0:19:45.21:0,45,1046	0/0:13,0:13:39.13:0,39,792	1/1:0,29:29:75.26:1223,75,0	1/1:0,39:39:99:1761,108,0	1/1:0,34:34:96.33:1566,96,0	1/1:0,28:28:81.28:1321,81,0	1/1:0,29:29:75.26:1223,75,0	1/1:0,35:35:96.33:1565,96,0	1/1:0,26:26:69.24:1126,69,0	1/1:0,18:18:51.11:734,51,0	1/1:0,14:14:36.12:582,36,0	1/1:0,47:47:99:2055,126,0	1/1:0,16:16:42.14:685,42,0	0/0:25,0:25:69.21:0,69,1316	0/0:27,0:27:81.28:0,81,1632	1/1:0,20:20:57.19:925,57,0	1/1:0,25:25:75.23:1198,75,0	1/1:0,32:32:84.29:1369,84,0	1/1:0,9:9:27.09:440,27,0
chr10	68839183	.	TA	T	21198.17	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=15.600;DP=811;FS=0.000;HRun=2;HaplotypeScore=106.6361;InbreedingCoeff=1.0000;MQ=85.91;MQ0=0;MQRankSum=-4.643;QD=36.74;ReadPosRankSum=2.438;VQSLOD=4.7984;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:78.25:0,78,1148	1/1:0,13:13:36.12:467,36,0	0/0:23,0:23:63.20:0,63,901	0/0:29,0:29:81.27:0,81,1187	0/0:28,0:28:84.27:0,84,1239	1/1:1,29:30:81.26:1052,81,0	1/1:0,27:27:72.23:935,72,0	1/1:1,44:45:99:1697,132,0	1/1:0,21:21:63.20:818,63,0	0/0:38,0:38:99:0,111,1659	0/0:20,0:20:60.17:0,60,829	1/1:0,28:28:84.27:1090,84,0	1/1:0,41:41:99:1519,117,0	1/1:0,25:25:72.23:934,72,0	1/1:0,33:33:90.29:1169,90,0	1/1:0,41:41:99:1519,117,0	1/1:0,34:34:96.31:1245,96,0	0/0:20,0:20:57.19:0,57,854	1/1:1,22:23:66.21:855,66,0	1/1:0,35:35:99:1286,99,0	1/1:2,44:46:99:1636,126,0	1/1:0,31:31:87.28:1130,87,0	0/0:16,0:16:48.16:0,48,720	0/0:33,0:33:99:0,99,1465	1/1:0,22:22:63.20:818,63,0	1/1:2,34:36:60.36:1276,60,0	1/1:0,33:33:96.31:1247,96,0	1/1:0,13:13:39.13:506,39,0
chr10	68839790	.	GT	G	12949.90	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=14.524;DP=620;FS=2.250;HRun=4;HaplotypeScore=92.5662;InbreedingCoeff=0.9997;MQ=93.06;MQ0=0;MQRankSum=-4.092;QD=31.43;ReadPosRankSum=4.268;VQSLOD=5.1450;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:81.24:0,81,1087	1/1:0,12:12:30.09:359,30,0	0/0:22,0:22:58.69:0,59,775	0/0:34,0:34:87.99:0,88,1006	0/0:22,0:22:63.17:0,63,825	1/1:2,20:22:57.17:682,57,0	1/1:0,21:21:51.16:610,51,0	1/1:0,22:22:66.19:780,66,0	1/1:0,17:17:48.15:574,48,0	0/0:27,0:27:78.19:0,78,1013	0/0:16,0:16:48.14:0,48,634	1/1:1,26:27:69.21:826,69,0	1/1:0,20:20:57.17:683,57,0	1/1:3,25:28:84.16:964,84,0	1/1:0,32:32:81.25:970,81,0	1/1:1,19:20:51.16:611,51,0	1/1:0,33:33:81.25:970,81,0	0/0:17,0:17:45.09:0,45,586	1/1:2,10:12:30.01:317,30,0	1/1:1,22:23:63.19:752,63,0	1/1:0,20:20:51.16:611,51,0	1/1:0,17:17:45.14:538,45,0	0/0:18,0:18:54.17:0,54,734	0/0:24,0:24:66.16:0,66,848	1/1:1,22:23:57.17:681,57,0	1/1:3,20:23:60.14:693,60,0	1/1:0,29:29:84.26:1005,84,0	1/1:0,11:11:27.08:323,27,0
chr10	68839941	.	AC	A	17432.73	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=16.063;DP=748;FS=0.282;HRun=2;HaplotypeScore=88.3540;InbreedingCoeff=0.9955;MQ=70.93;MQ0=0;MQRankSum=-5.046;QD=35.50;ReadPosRankSum=2.338;VQSLOD=5.2861;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:58:99:0,172,2540	1/1:0,18:18:51.17:660,51,0	0/0:26,0:26:78.20:0,78,1093	0/0:17,0:17:40.68:0,41,657	0/0:26,0:26:78.26:0,78,1168	1/1:0,24:24:69.22:896,69,0	1/1:0,19:19:51.17:662,51,0	1/1:0,21:21:63.19:805,63,0	1/1:0,23:23:54.18:701,54,0	0/0:41,0:41:99:0,120,1778	0/0:22,0:22:66.14:0,66,941	1/1:0,22:22:57.19:740,57,0	1/1:0,27:27:75.24:973,75,0	1/1:0,31:31:87.28:1129,87,0	1/1:0,29:29:81.26:1052,81,0	1/1:0,29:29:78.25:1013,78,0	1/1:1,35:36:99:1324,102,0	0/0:18,0:18:51.17:0,51,761	1/1:2,22:24:69.20:879,69,0	1/1:1,21:22:63.17:800,63,0	1/1:0,24:24:69.22:890,69,0	1/1:0,25:25:72.15:912,72,0	0/0:22,0:22:66.21:0,66,970	0/0:27,0:27:81.27:0,81,1214	1/1:1,28:29:75.24:973,75,0	1/1:2,32:34:12.36:1118,12,0	1/1:0,35:35:90.29:1168,90,0	1/1:0,19:19:57.19:740,57,0
chr10	68840183	.	CTTTAAAT	C	21878.68	PASS	AB=0.576;AC=37;AF=0.661;AN=56;BaseQRankSum=19.647;DP=703;FS=2.254;HRun=0;HaplotypeScore=350.4180;InbreedingCoeff=0.9157;MQ=70.10;MQ0=0;MQRankSum=-18.945;QD=47.15;ReadPosRankSum=6.400;VQSLOD=3.6403;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:57:99:0,163,6257	1/1:1,11:12:30.10:705,30,0	0/0:14,0:14:36.12:0,36,1100	0/0:25,0:25:69.17:0,69,2184	0/0:21,0:21:60.21:0,60,2383	1/1:5,14:19:33.11:855,33,0	1/1:3,20:23:42.14:1089,42,0	1/1:12,13:25:39.13:1011,39,0	1/1:3,31:34:75.26:1925,75,0	0/0:34,0:34:99:0,102,4030	0/0:19,0:19:57.20:0,57,2256	1/1:11,32:43:90.29:2273,90,0	1/1:8,27:35:66.22:1710,66,0	1/1:5,33:38:81.27:2098,81,0	1/1:9,21:30:45.14:1113,45,0	1/1:9,19:28:57.18:1425,57,0	1/1:5,12:17:26.34:698,26,0	0/0:21,0:21:63.18:0,63,2422	1/1:7,11:18:30.57:780,31,0	1/1:5,11:16:24.06:569,24,0	1/1:11,12:23:14.42:460,14,0	1/1:7,12:19:18.06:466,18,0	0/0:18,0:18:54.19:0,54,2058	0/0:30,0:30:87.30:0,87,3446	1/1:4,25:29:66.23:1710,66,0	0/1:5,14:19:74.89:1045,0,75	1/1:3,16:19:45.15:1167,45,0	1/1:7,10:17:30.10:778,30,0
chr10	68840197	.	AGAG	A	18340	PASS	AB=0.517;AC=37;AF=0.661;AN=56;BaseQRankSum=20.394;DP=601;FS=0.000;HRun=0;HaplotypeScore=274.3726;InbreedingCoeff=0.9201;MQ=77.52;MQ0=0;MQRankSum=-19.832;QD=51.81;ReadPosRankSum=4.739;VQSLOD=4.2825;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:59,0:59:99:0,175,4201	1/1:0,12:12:33.10:584,33,0	0/0:15,0:15:42.14:0,42,982	0/0:28,0:28:75.26:0,75,1750	0/0:25,0:25:75.26:0,75,1848	1/1:0,14:14:39.13:724,39,0	1/1:0,20:20:51.17:946,51,0	1/1:0,13:13:39.13:725,39,0	1/1:1,31:32:90.31:1646,90,0	0/0:33,0:32:99:0,99,2439	0/0:19,0:19:57.20:0,57,1376	1/1:0,32:32:96.33:1775,96,0	1/1:0,27:27:78.27:1447,78,0	1/1:1,33:34:99:1827,99,0	1/1:0,21:21:57.20:1058,57,0	1/1:0,19:19:57.20:1057,57,0	1/1:0,12:12:27.56:502,28,0	0/0:22,0:22:66.23:0,66,1613	1/1:0,14:14:36.98:609,37,0	1/1:0,11:11:33.11:613,33,0	1/1:0,12:12:33.11:613,33,0	1/1:0,12:12:33.11:612,33,0	0/0:19,0:19:57.18:0,57,1356	0/0:27,0:27:81.24:0,81,1895	1/1:1,25:26:75.26:1384,75,0	0/1:1,14:15:28.83:736,0,29	1/1:0,16:16:45.15:835,45,0	1/1:2,10:12:36.12:649,36,0
chr10	68842318	.	CTT	C	16601.01	PASS	AB=0.525;AC=37;AF=0.661;AN=56;BaseQRankSum=16.233;DP=643;FS=0.305;HRun=3;HaplotypeScore=104.6080;InbreedingCoeff=0.9195;MQ=86.98;MQ0=5;MQRankSum=-5.058;QD=39.81;ReadPosRankSum=1.897;VQSLOD=4.3408;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:75.26:0,75,1431	1/1:0,10:9:21.07:322,21,0	0/0:28,0:28:81.26:0,81,1507	0/0:18,0:18:44.93:0,45,760	0/0:37,0:37:99:0,111,2130	1/1:0,33:33:96.32:1458,96,0	1/1:2,13:15:33.11:505,33,0	1/1:3,29:32:84.28:1282,84,0	1/1:0,26:26:72.24:1102,72,0	0/0:30,0:30:90.31:0,90,1739	0/0:19,0:19:57.20:0,57,1087	1/1:0,24:22:57.19:873,57,0	1/1:2,19:21:54.18:825,54,0	1/1:0,13:13:30.10:459,30,0	1/1:1,22:22:60.20:918,60,0	1/1:0,26:25:63.21:965,63,0	1/1:0,13:13:30.10:459,30,0	0/0:26,0:26:78.27:0,78,1468	1/1:0,20:20:60.20:900,60,0	1/1:1,34:35:99:1505,99,0	1/1:0,12:12:36.12:551,36,0	1/1:2,19:21:54.18:827,54,0	0/0:29,0:29:87.30:0,87,1674	0/0:14,0:14:42.14:0,42,794	1/1:0,28:28:72.24:1091,72,0	0/1:2,19:21:55.80:721,0,56	1/1:1,28:29:75.25:1148,75,0	1/1:0,15:15:45.15:689,45,0
chr10	68842923	.	AACAC	A	3077.52	PASS	AB=0.861;AC=36;AF=0.783;AN=46;BaseQRankSum=5.014;DP=642;FS=4.276;HRun=0;HaplotypeScore=104.6042;InbreedingCoeff=0.3776;MQ=61.93;MQ0=17;MQRankSum=-0.826;QD=6.82;ReadPosRankSum=-0.507;VQSLOD=2.1536;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:33:34.13:34,0,114	1/1:5,0:5:2.92:17,3,0	./.	./.	0/0:17,0:17:12.23:0,12,148	1/1:12,6:19:11.97:157,12,0	1/1:22,7:31:18.04:238,18,0	./.	1/1:8,10:18:15.03:231,15,0	1/1:15,0:16:8.97:84,9,0	./.	1/1:21,6:29:27.05:373,27,0	1/1:15,7:22:21.07:323,21,0	1/1:24,6:32:5.75:74,6,0	1/1:16,9:26:23.56:350,24,0	1/1:16,10:29:30.09:425,30,0	0/1:25,8:34:42.36:324,0,42	1/1:9,0:14:9.48:84,9,0	1/1:18,2:19:3.01:46,3,0	0/1:6,0:7:0:0,0,0	1/1:45,3:47:11.51:147,12,0	./.	0/0:19,0:19:12.04:0,12,271	0/0:31,0:31:44.62:0,45,905	1/1:21,4:24:8.69:138,9,0	1/1:16,4:20:3:46,3,0	0/1:11,4:15:31.36:83,0,31	1/1:5,2:6:3.01:46,3,0
chr10	68843612	.	AG	A	721.92	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.714;DP=603;FS=1.752;HRun=1;HaplotypeScore=56.5149;InbreedingCoeff=0.9446;MQ=84.82;MQ0=0;MQRankSum=-2.512;QD=36.10;ReadPosRankSum=0.478;VQSLOD=3.7661;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:60.12:0,60,928	0/0:3,0:3:9.03:0,9,144	0/0:24,0:24:51.46:0,51,1064	0/0:13,1:14:36.17:0,36,562	0/0:38,0:38:99:0,114,1820	0/0:25,0:25:75.23:0,75,1152	0/0:15,0:15:45.15:0,45,719	0/0:30,0:30:90.27:0,90,1372	0/0:15,0:15:45.15:0,45,719	0/0:24,0:24:72.25:0,72,1149	0/0:26,0:26:78.25:0,78,1218	0/0:23,0:23:69.23:0,69,1087	0/0:28,0:28:84.27:0,84,1316	0/0:21,0:21:63.21:0,63,1004	0/0:24,0:24:72.25:0,72,1151	0/0:25,0:25:75.26:0,75,1199	0/0:24,0:24:72.25:0,72,1150	1/1:0,20:20:60.16:817,60,0	0/0:26,0:26:78.26:0,78,1223	0/0:20,0:20:60.19:0,60,935	0/0:19,0:19:57.19:0,57,908	0/0:14,0:14:42.13:0,42,644	0/0:25,0:25:75.24:0,75,1172	0/0:15,0:15:45.15:0,45,719	0/0:23,0:23:66.23:0,66,1054	0/0:18,0:18:54.17:0,54,840	0/0:34,0:33:99:0,102,1601	0/0:10,0:10:30.03:0,30,403
chr10	68843841	.	ACTT	A	1155.93	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.528;DP=431;FS=0.000;HRun=0;HaplotypeScore=97.0932;InbreedingCoeff=0.8653;MQ=71.80;MQ0=0;MQRankSum=-0.043;QD=48.16;ReadPosRankSum=0.836;VQSLOD=5.7427;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:72.23:0,72,1692	0/0:10,0:10:29.84:0,30,675	0/0:8,0:8:4.39:0,4,199	0/0:10,0:10:25.86:0,26,415	0/0:28,0:28:84.29:0,84,2068	0/0:18,0:18:53.77:0,54,1179	0/0:11,0:11:30.09:0,30,683	0/0:31,0:31:90.30:0,90,2039	0/0:8,0:8:24.08:0,24,587	0/0:17,0:17:51.16:0,51,1145	0/0:17,0:17:51.18:0,51,1226	0/0:11,0:11:30.09:0,30,677	0/0:13,0:13:30.10:0,30,727	0/0:8,0:8:20.99:0,21,406	0/0:13,0:13:39.13:0,39,947	0/0:13,0:13:33.04:0,33,713	0/0:15,0:15:42.14:0,42,1000	1/1:6,18:24:69.24:1251,69,0	0/0:9,0:9:27.09:0,27,664	0/0:14,0:14:42.14:0,42,1032	0/0:12,0:12:33.11:0,33,802	0/0:7,0:7:21.07:0,21,434	0/0:19,0:19:57.20:0,57,1382	0/0:11,0:11:33.11:0,33,801	0/0:18,0:18:54.10:0,54,1213	0/0:23,0:23:69.23:0,69,1582	0/0:21,0:21:60.17:0,60,1253	0/0:18,0:18:51.17:0,51,1208
chr10	68843847	.	A	AT	10076.99	PASS	AB=1.000;AC=41;AF=0.732;AN=56;BaseQRankSum=-4.088;DP=433;FS=65.229;HRun=4;HaplotypeScore=59.7925;InbreedingCoeff=0.9042;MQ=72.94;MQ0=0;MQRankSum=-4.757;QD=33.26;ReadPosRankSum=0.933;VQSLOD=-0.3085;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:75.21:0,75,850	1/1:1,9:10:27.09:369,27,0	0/0:10,0:10:20.91:0,21,203	0/1:9,0:10:18.19:18,0,106	0/0:32,0:32:87.21:0,87,964	1/1:0,17:17:51.17:697,51,0	1/1:2,10:12:26.77:369,27,0	1/1:5,24:29:75.22:984,75,0	1/1:1,7:8:21.07:287,21,0	0/0:15,0:15:45.13:0,45,511	0/0:18,0:18:54.07:0,54,586	1/1:3,9:12:30.02:369,30,0	1/1:2,11:13:24.08:325,24,0	1/1:1,7:8:21.04:267,21,0	1/1:0,13:13:39.10:513,39,0	1/1:2,11:13:30.07:390,30,0	1/1:0,15:15:42.14:574,42,0	1/1:6,20:26:63.11:797,63,0	1/1:0,10:10:30.10:410,30,0	1/1:6,11:17:33.04:428,33,0	1/1:0,11:11:33.11:451,33,0	1/1:2,5:7:15.05:205,15,0	0/0:19,0:19:57.15:0,57,637	0/0:10,0:10:30.09:0,30,340	1/1:2,14:16:42.14:574,42,0	1/1:3,19:22:26.16:742,26,0	1/1:0,17:17:48.16:653,48,0	1/1:0,17:17:48.16:655,48,0
chr10	68843859	.	TCTTGAC	T	463.37	PASS	AB=0.750;AC=1;AF=0.018;AN=56;BaseQRankSum=4.702;DP=426;FS=2.649;HRun=0;HaplotypeScore=130.7077;InbreedingCoeff=-0.0185;MQ=78.43;MQ0=0;MQRankSum=-4.218;QD=19.31;ReadPosRankSum=-1.622;VQSLOD=3.3607;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:90.31:0,90,3254	0/0:10,0:10:30.10:0,30,1002	0/0:12,0:12:33.11:0,33,1110	0/0:13,0:14:38.14:0,38,1142	0/0:31,0:31:93.30:0,93,3344	0/0:18,0:18:54.19:0,54,1799	0/0:13,0:13:39.13:0,39,1353	0/1:16,8:24:99:538,0,500	0/0:9,0:9:27.09:0,27,969	0/0:18,0:18:54.19:0,54,1928	0/0:15,0:15:45.15:0,45,1676	0/0:12,0:12:36.11:0,36,1229	0/0:9,0:9:27.09:0,27,874	0/0:9,0:9:27.09:0,27,913	0/0:14,0:14:42.14:0,42,1519	0/0:9,0:9:27.09:0,27,1013	0/0:14,0:14:42.14:0,42,1552	0/0:24,0:24:66.23:0,66,2451	0/0:8,0:8:24.08:0,24,875	0/0:14,0:14:42.14:0,42,1557	0/0:11,0:11:33.10:0,33,1076	0/0:10,0:10:30.10:0,30,1004	0/0:18,0:18:54.19:0,54,2031	0/0:10,0:10:30.10:0,30,1110	0/0:16,0:16:48.16:0,48,1528	0/0:21,0:21:63.22:0,63,2203	0/0:17,0:17:48.16:0,48,1771	0/0:16,0:16:48.16:0,48,1695
chr10	68843867	.	AC	A	395.51	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.698;DP=433;FS=2.991;HRun=1;HaplotypeScore=86.8419;InbreedingCoeff=0.9875;MQ=84.75;MQ0=0;MQRankSum=-5.332;QD=19.78;ReadPosRankSum=-1.430;VQSLOD=3.4897;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:90.31:0,90,1438	0/0:8,0:8:24.08:0,24,383	0/0:19,0:19:54.18:0,54,862	0/0:15,0:15:45.15:0,45,682	0/0:39,0:39:99:0,114,1765	0/0:17,0:17:42.14:0,42,670	0/0:11,0:11:27.09:0,27,430	1/1:11,9:20:57.30:490,57,0	0/0:10,0:10:30.10:0,30,479	0/0:22,0:22:66.23:0,66,1053	0/0:14,0:14:42.14:0,42,671	0/0:11,0:11:30.10:0,30,475	0/0:8,0:8:24.08:0,24,383	0/0:8,0:8:24.08:0,24,383	0/0:15,0:15:39.13:0,39,622	0/0:10,0:10:27.56:0,28,432	0/0:13,0:13:39.13:0,39,622	0/0:22,0:22:63.21:0,63,1007	0/0:10,0:10:30.09:0,30,459	0/0:14,0:14:36.12:0,36,575	0/0:8,0:8:24.08:0,24,383	0/0:14,0:13:33.11:0,33,526	0/0:21,0:21:63.18:0,63,979	0/0:11,0:11:33.11:0,33,527	0/0:12,0:12:33.11:0,33,526	0/0:19,0:19:57.19:0,57,910	0/0:15,0:15:42.14:0,42,670	0/0:17,0:17:48.16:0,48,762
chr10	68843868	.	C	CGTTTA	1719.11	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.163;DP=441;FS=3.774;HRun=0;HaplotypeScore=138.5986;InbreedingCoeff=0.9868;MQ=84.18;MQ0=0;MQRankSum=-6.590;QD=63.67;ReadPosRankSum=-2.919;VQSLOD=3.8008;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:90.31:0,90,2073	0/0:8,0:8:24.08:0,24,556	0/0:19,0:19:54.19:0,54,1233	0/0:15,0:15:45.15:0,45,964	0/0:39,0:39:99:0,114,2441	0/0:17,0:17:42.06:0,42,978	0/0:11,0:11:26.88:0,27,632	1/1:18,9:27:75.24:1814,75,0	0/0:10,0:10:30.10:0,30,699	0/0:23,0:23:66.23:0,66,1492	0/0:14,0:14:42.14:0,42,979	0/0:11,0:11:30.09:0,30,653	0/0:8,0:8:24.08:0,24,559	0/0:8,0:8:24.08:0,24,558	0/0:15,0:15:39.11:0,39,908	0/0:10,0:10:27.09:0,27,628	0/0:13,0:13:39.13:0,39,908	0/0:22,0:22:63.22:0,63,1468	0/0:10,0:10:27.09:0,27,627	0/0:14,0:14:35.99:0,36,838	0/0:8,0:8:24.08:0,24,559	0/0:14,0:13:33.11:0,33,768	0/0:21,0:21:63.22:0,63,1417	0/0:11,0:11:33.11:0,33,766	0/0:12,0:12:33.11:0,33,769	0/0:19,0:19:57.19:0,57,1295	0/0:15,0:15:42.14:0,42,978	0/0:17,0:17:40.23:0,40,1076
chr10	68843940	.	G	GA	410.70	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-6.216;DP=466;FS=2.310;HRun=7;HaplotypeScore=55.3139;InbreedingCoeff=0.9567;MQ=79.22;MQ0=0;MQRankSum=0.706;QD=20.54;ReadPosRankSum=0.330;VQSLOD=3.0739;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,123,1161	0/0:11,0:9:27:0,27,251	0/0:27,0:24:32.79:0,33,293	0/0:20,0:18:36.81:0,37,292	0/0:33,0:33:87.11:0,87,831	0/0:12,0:12:32.88:0,33,303	0/0:11,0:11:27:0,27,245	0/0:4,0:13:25.06:0,25,81	0/0:9,0:9:24.03:0,24,231	0/0:25,0:25:66.09:0,66,629	0/0:14,0:14:36.02:0,36,335	0/0:15,0:15:45.07:0,45,432	0/0:18,0:18:47.03:0,47,420	0/0:15,0:15:42.06:0,42,401	0/0:15,0:15:39:0,39,364	0/0:15,0:15:42.07:0,42,405	0/0:13,0:13:33.01:0,33,306	1/1:5,15:20:42.13:506,42,0	0/0:9,0:9:21.01:0,21,194	0/0:15,0:14:36.05:0,36,347	0/0:12,0:12:30.04:0,30,289	0/0:7,0:6:14.69:0,15,125	0/0:17,0:17:48.08:0,48,463	0/0:21,0:21:60.05:0,60,559	0/0:20,0:18:51.02:0,51,481	0/0:19,0:17:39.05:0,39,371	0/0:10,0:10:30.05:0,30,288	0/0:5,0:5:15.02:0,15,144
chr10	68845365	.	AC	A	576.14	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.196;DP=833;FS=37.587;HRun=1;HaplotypeScore=79.9832;InbreedingCoeff=0.9692;MQ=81.51;MQ0=0;MQRankSum=-2.676;QD=32.01;ReadPosRankSum=-4.352;VQSLOD=0.3731;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:51:99:0,154,2416	0/0:12,0:12:33.11:0,33,526	0/0:27,0:27:63.78:0,64,1086	0/0:25,0:25:72.21:0,72,1094	0/0:32,0:32:93.30:0,93,1458	0/0:25,0:25:75.26:0,75,1194	0/0:20,0:20:60.20:0,60,958	1/1:1,17:18:28.37:670,28,0	0/0:28,0:28:84.29:0,84,1341	0/0:31,0:31:93.32:0,93,1486	0/0:22,0:22:66.21:0,66,1027	0/0:47,0:47:99:0,138,2123	0/0:33,0:33:99:0,99,1527	0/0:38,0:38:99:0,114,1814	0/0:63,0:63:99:0,187,2933	0/0:42,0:42:99:0,123,1939	0/0:23,0:23:69.24:0,69,1095	0/0:14,0:14:36.11:0,36,551	0/0:25,0:25:75.23:0,75,1127	0/0:29,0:29:84.23:0,84,1289	0/0:40,0:40:99:0,117,1821	0/0:36,0:36:99:0,105,1651	0/0:20,0:20:60.19:0,60,929	0/0:32,0:32:96.31:0,96,1508	0/0:18,0:18:54.18:0,54,856	0/0:42,0:42:99:0,123,1934	0/0:35,0:35:99:0,105,1614	0/0:4,0:4:12.04:0,12,192
chr10	68848419	.	AT	A	7489.36	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=11.293;DP=436;FS=2.521;HRun=9;HaplotypeScore=46.6389;InbreedingCoeff=0.9891;MQ=71.41;MQ0=0;MQRankSum=-2.299;QD=24.24;ReadPosRankSum=0.389;VQSLOD=5.5116;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:39.12:0,39,450	1/1:1,7:8:21.01:192,21,0	0/0:10,0:10:18.37:0,18,196	0/0:6,0:6:12.04:0,12,138	0/0:27,0:28:78.06:0,78,880	1/1:1,8:9:24.01:220,24,0	1/1:1,7:8:21.01:192,21,0	1/1:7,32:39:99:902,100,0	1/1:1,11:12:30.02:275,30,0	0/0:23,0:23:60.17:0,60,683	0/0:27,0:27:57.17:0,57,658	1/1:0,14:14:36.02:330,36,0	1/1:3,15:18:30.09:370,30,0	1/1:1,9:10:30.02:274,30,0	1/1:1,14:15:39.01:357,39,0	1/1:1,13:14:39.02:357,39,0	1/1:1,16:17:39.02:357,39,0	1/1:0,15:15:41.98:376,42,0	1/1:0,15:15:45.02:411,45,0	1/1:1,15:16:45.02:412,45,0	1/1:0,8:8:18.01:165,18,0	1/1:0,11:11:33.02:302,33,0	0/0:8,0:8:21.06:0,21,242	0/0:9,0:9:27.08:0,27,312	1/1:3,18:21:48.02:439,48,0	1/1:0,10:10:30:269,30,0	1/1:1,35:36:99:961,105,0	1/1:1,12:13:36.02:329,36,0
chr10	68848959	.	T	TTTTTTC	3529.45	PASS	AB=0.922;AC=24;AF=0.444;AN=54;BaseQRankSum=-5.359;DP=570;FS=3.784;HRun=0;HaplotypeScore=101.1195;InbreedingCoeff=-0.1480;MQ=51.06;MQ0=38;MQRankSum=-0.370;QD=9.41;ReadPosRankSum=-0.066;VQSLOD=2.0959;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:33:57.23:0,57,727	1/1:7,0:7:13.85:102,14,0	./.	0/1:36,0:14:0.58:1,0,50	0/0:29,0:28:47.78:0,48,630	0/1:10,11:21:33.28:162,0,33	0/1:7,6:14:9.06:167,0,9	0/1:34,0:28:9.45:213,0,9	1/1:12,0:9:11.57:144,12,0	0/0:20,0:19:22.86:0,23,341	0/0:26,0:26:24.89:0,25,463	1/1:10,0:10:14.80:127,15,0	0/1:18,0:13:31.74:160,0,32	0/1:14,0:13:6.08:54,0,6	0/1:15,0:14:79.19:123,0,79	0/1:19,2:20:29.57:279,0,30	0/1:19,0:13:4.26:224,0,4	0/0:16,0:14:29.46:0,29,322	0/1:15,0:13:8.88:190,0,9	0/1:33,0:33:23.14:443,0,23	1/1:6,0:4:2.91:18,3,0	0/1:13,0:11:47.76:125,0,48	0/0:26,0:25:4.72:0,5,447	0/0:12,0:9:23.82:0,24,347	0/1:7,17:24:26.42:141,0,26	0/1:25,0:23:14.86:401,0,15	0/1:21,1:19:39.44:266,0,39	0/1:13,0:12:9.76:190,0,10
chr10	68848963	.	T	TTC	1865.33	PASS	AB=0.981;AC=20;AF=0.370;AN=54;BaseQRankSum=-3.973;DP=549;FS=0.864;HRun=0;HaplotypeScore=68.6533;InbreedingCoeff=-0.4273;MQ=47.97;MQ0=40;MQRankSum=2.738;QD=5.81;ReadPosRankSum=1.806;VQSLOD=2.3040;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:33:82.68:0,83,730	0/1:8,0:8:46.34:75,0,46	./.	0/0:33,0:13:1.68:0,2,31	0/0:29,0:28:70.08:0,70,669	0/1:18,0:18:19.10:19,0,121	0/1:15,0:13:31.91:32,0,45	0/1:17,11:21:52.85:211,0,53	0/1:11,0:8:55.24:64,0,55	0/0:21,0:20:55.48:0,55,438	0/0:26,0:26:62.71:0,63,541	0/1:10,0:10:2.07:109,0,2	0/1:18,0:13:62.19:88,0,62	0/1:12,0:11:6.96:54,0,7	0/1:14,1:14:70.61:71,0,162	0/1:22,0:21:81.86:139,0,82	0/1:19,0:13:42.94:96,0,43	0/0:17,0:14:34.04:0,34,286	0/1:17,0:15:40.49:160,0,40	0/1:33,0:33:99:281,0,125	1/1:7,0:4:2.85:18,3,0	0/1:12,0:10:79.38:85,0,79	0/0:26,0:25:68.75:0,69,674	0/0:12,0:9:26.48:0,26,256	0/1:20,0:19:33.83:34,0,70	0/1:23,0:21:39.44:262,0,39	0/1:21,0:18:99:118,0,139	0/1:12,0:11:64.93:107,0,65
chr10	68848964	.	T	TC	1427.24	PASS	AB=0.974;AC=20;AF=0.370;AN=54;BaseQRankSum=-3.525;DP=542;FS=4.478;HRun=0;HaplotypeScore=61.3819;InbreedingCoeff=-0.3703;MQ=47.81;MQ0=39;MQRankSum=4.140;QD=4.32;ReadPosRankSum=0.012;VQSLOD=2.6447;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:32:80.64:0,81,709	0/1:8,0:8:45.65:75,0,46	./.	0/1:32,0:13:2:2,0,21	0/0:29,0:28:74.20:0,74,674	0/0:18,0:18:7.91:0,8,126	0/1:15,0:13:4.24:4,0,47	0/1:26,0:19:48.27:186,0,48	0/1:11,0:8:52.05:52,0,63	0/0:20,0:19:55:0,55,426	0/0:27,0:27:64.83:0,65,513	0/1:10,0:10:1.76:109,0,2	0/1:18,0:13:57.95:78,0,58	0/1:12,0:11:7.21:53,0,7	0/1:15,0:14:33.97:34,0,161	0/1:20,1:20:79.34:114,0,79	0/1:18,0:12:49:85,0,49	0/0:17,0:14:38.47:0,38,300	0/1:8,9:15:57.94:141,0,58	0/1:31,1:32:99:219,0,122	1/1:5,2:4:2.84:18,3,0	0/1:13,0:11:71.19:71,0,72	0/0:26,0:25:71.76:0,72,661	0/0:12,0:9:26.72:0,27,234	0/1:20,0:19:6.48:6,0,71	0/1:22,0:20:50.12:212,0,50	0/1:20,0:18:65.48:65,0,137	0/1:12,0:11:54.94:55,0,56
chr10	68850759	.	GT	G	10461.35	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=11.144;DP=720;FS=0.331;HRun=10;HaplotypeScore=108.0890;InbreedingCoeff=0.9949;MQ=77.14;MQ0=0;MQRankSum=-1.453;QD=20.76;ReadPosRankSum=3.518;VQSLOD=4.6707;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:39:90.08:0,90,976	1/1:0,9:9:26.99:234,27,0	0/0:21,1:19:23.17:0,23,252	0/0:24,1:23:18.95:0,19,340	0/0:30,1:32:64.02:0,64,917	1/1:1,22:23:35.64:470,36,0	1/1:0,22:23:62.98:547,63,0	1/1:3,17:19:44.98:390,45,0	1/1:1,25:26:68.99:599,69,0	0/0:30,0:30:63.16:0,63,682	0/0:11,0:11:24.32:0,24,294	1/1:2,30:32:74.98:651,75,0	1/1:4,16:20:44.60:390,45,0	1/1:5,31:37:80:682,80,0	1/1:3,43:46:99:938,108,0	1/1:4,22:26:26.69:462,27,0	1/1:1,22:23:50.99:443,51,0	1/1:1,21:22:56.98:495,57,0	1/1:5,16:21:47.93:405,48,0	1/1:1,24:25:68.98:599,69,0	1/1:4,28:32:38.81:566,39,0	1/1:3,20:23:53.96:468,54,0	0/0:28,0:28:72.19:0,72,793	0/0:28,1:29:43.12:0,43,695	1/1:3,15:18:14.76:342,15,0	1/1:3,26:29:47.78:639,48,0	1/1:1,35:36:98.98:859,99,0	1/1:0,13:13:32.98:283,33,0
chr10	68852184	.	GA	G	857.59	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.769;DP=716;FS=1.550;HRun=5;HaplotypeScore=109.4631;InbreedingCoeff=0.9768;MQ=85.07;MQ0=0;MQRankSum=-4.290;QD=29.57;ReadPosRankSum=-2.939;VQSLOD=1.9484;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,126,1683	0/0:5,0:5:15.04:0,15,191	0/0:23,0:23:60.16:0,60,760	0/0:22,0:22:57.14:0,57,746	0/0:20,0:20:60.17:0,60,788	0/0:23,0:23:69.23:0,69,944	0/0:24,0:24:63.21:0,63,862	1/1:2,27:29:84.24:952,84,0	0/0:30,0:30:81.26:0,81,1092	0/0:27,0:25:72.24:0,72,978	0/0:28,0:28:81.26:0,81,1087	0/0:36,0:36:93.30:0,93,1254	0/0:26,0:26:72.24:0,72,984	0/0:36,0:36:99:0,99,1311	0/0:32,0:32:81.27:0,81,1108	0/0:28,0:28:69.21:0,69,913	0/0:27,0:27:63.21:0,63,862	0/0:20,0:20:54.18:0,54,739	0/0:18,0:18:54.18:0,54,735	0/0:26,0:26:78.22:0,78,1017	0/0:26,0:26:75.20:0,75,990	0/0:21,0:21:60.20:0,60,820	0/0:21,0:21:60.20:0,60,819	0/0:32,0:32:90.30:0,90,1231	0/0:23,0:23:66.22:0,66,903	0/0:30,0:30:90.30:0,90,1232	0/0:27,0:27:75.25:0,75,1026	0/0:9,0:9:18.06:0,18,246
chr10	68852212	.	T	TC	19569.92	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=-15.494;DP=729;FS=3.641;HRun=2;HaplotypeScore=62.6216;InbreedingCoeff=0.9687;MQ=83.28;MQ0=0;MQRankSum=-5.095;QD=37.13;ReadPosRankSum=3.396;VQSLOD=5.6044;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,126,1544	1/1:0,10:10:30.10:432,30,0	0/0:29,0:29:78.14:0,78,897	0/0:26,0:26:53.80:0,54,689	0/0:23,0:23:63.20:0,63,780	1/1:1,22:23:63:876,63,0	1/1:1,21:22:51.17:734,51,0	1/1:4,25:29:86.91:1118,87,0	1/1:1,31:32:81.27:1163,81,0	1/1:0,23:21:66.22:949,66,0	1/1:2,27:29:69.23:990,69,0	1/1:0,28:28:75.25:1079,75,0	1/1:1,25:26:72.24:1036,72,0	1/1:2,30:32:81.27:1166,81,0	1/1:2,27:29:69.23:991,69,0	1/1:0,31:31:81.27:1165,81,0	1/1:1,31:32:78.26:1122,78,0	0/0:23,0:23:66.21:0,66,814	1/1:2,17:19:48.06:643,48,0	1/1:1,22:23:66.18:927,66,0	1/1:0,28:28:72.24:1036,72,0	1/1:0,25:25:66.22:950,66,0	0/0:26,0:26:78.23:0,78,952	0/0:30,0:30:81.21:0,81,986	1/1:0,22:22:57.19:820,57,0	1/1:4,28:32:84.28:1208,84,0	1/1:1,28:29:78.26:1122,78,0	1/1:2,1:3:3.01:43,3,0
chr10	68852927	.	T	TA	19792.69	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-0.455;DP=802;FS=12.140;HRun=2;HaplotypeScore=90.4512;InbreedingCoeff=0.9937;MQ=80.06;MQ0=0;MQRankSum=-1.869;QD=38.21;ReadPosRankSum=3.661;VQSLOD=4.3381;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:93.27:0,93,1138	1/1:0,14:14:42.14:604,42,0	0/0:19,0:20:10.57:0,11,427	0/0:18,0:18:32.24:0,32,408	0/0:29,0:29:84.23:0,84,1014	1/1:2,22:24:60.20:864,60,0	1/1:2,25:27:63.21:907,63,0	0/0:31,0:31:90.28:0,90,1115	1/1:2,33:35:90.30:1289,90,0	0/0:46,0:46:99:0,126,1540	0/0:35,0:35:99:0,99,1216	1/1:2,41:43:99:1684,117,0	1/1:1,28:29:72.24:1036,72,0	1/1:1,24:25:66.22:950,66,0	1/1:0,42:42:99:1684,117,0	1/1:0,40:40:99:1598,111,0	1/1:3,23:26:69.23:993,69,0	0/0:22,0:22:66.19:0,66,804	1/1:1,21:22:60.19:847,60,0	1/1:1,35:36:99:1441,105,0	1/1:2,21:23:57.19:820,57,0	1/1:3,25:28:66.18:926,66,0	0/0:23,0:23:69.21:0,69,844	0/0:28,0:28:84.26:0,84,1040	1/1:0,26:26:72.24:1036,72,0	1/1:1,38:39:99:1603,114,0	1/1:2,21:23:57.19:820,57,0	1/1:0,16:16:48.16:690,48,0
chr10	68854848	.	C	CTT	349.06	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-3.690;DP=458;FS=8.307;HRun=7;HaplotypeScore=54.4917;InbreedingCoeff=0.9584;MQ=75.59;MQ0=0;MQRankSum=-1.172;QD=26.85;ReadPosRankSum=0.618;VQSLOD=2.2985;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:48.14:0,48,559	0/0:8,0:8:24.07:0,24,279	0/0:18,0:17:12.55:0,13,414	0/0:13,0:13:24.03:0,24,257	0/0:23,0:23:66.19:0,66,769	0/0:17,0:17:48.14:0,48,559	0/0:9,0:9:27.08:0,27,315	0/0:34,0:34:78.21:0,78,909	0/0:10,0:10:30.09:0,30,349	0/0:19,0:19:54.16:0,54,629	0/0:16,0:16:45.13:0,45,524	0/0:17,0:17:51.15:0,51,594	0/0:15,0:15:39.11:0,39,454	0/0:10,0:10:30.09:0,30,349	0/0:21,0:22:53.88:0,54,690	0/0:17,0:17:51.15:0,51,594	0/0:20,0:20:51.15:0,51,592	1/1:1,12:13:27.09:443,27,0	0/0:21,0:21:57.16:0,57,664	0/0:21,0:21:63.19:0,63,734	0/0:10,0:10:30.07:0,30,338	0/0:7,0:7:21.06:0,21,245	0/0:14,0:14:42.12:0,42,489	0/0:7,0:7:21.06:0,21,245	0/0:15,0:15:42.12:0,42,489	0/0:24,0:23:72.21:0,72,838	0/0:26,0:26:75.22:0,75,874	0/0:15,0:15:45.13:0,45,524
chr10	68855488	.	AT	A	3755.92	PASS	AB=0.667;AC=36;AF=0.643;AN=56;BaseQRankSum=10.297;DP=341;FS=6.651;HRun=10;HaplotypeScore=59.3173;InbreedingCoeff=0.7911;MQ=73.86;MQ0=3;MQRankSum=-1.616;QD=20.41;ReadPosRankSum=4.503;VQSLOD=4.4852;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:72.17:0,72,785	1/1:0,4:4:9:78,9,0	0/0:20,0:11:8.93:0,9,164	0/0:18,0:11:23.77:0,24,205	0/0:11,0:12:32.92:0,33,346	1/1:0,19:19:38.99:339,39,0	1/1:1,4:5:9:78,9,0	0/0:33,0:32:77:0,77,821	1/1:0,8:8:21:182,21,0	0/0:19,0:17:42.11:0,42,464	0/0:10,0:10:30.07:0,30,323	1/1:0,10:10:29.99:260,30,0	1/1:1,10:11:32.99:286,33,0	1/1:0,3:3:9:78,9,0	1/1:0,5:5:15:130,15,0	1/1:0,6:6:12:104,12,0	1/1:2,11:13:26.99:234,27,0	1/1:1,20:20:56.99:495,57,0	1/1:1,12:13:32.95:279,33,0	1/1:0,14:14:35.99:313,36,0	0/1:2,1:3:12.28:20,0,12	1/1:0,4:4:12:104,12,0	0/0:12,0:12:36.08:0,36,386	0/0:4,0:4:9.02:0,9,100	1/1:3,8:11:23.98:208,24,0	0/1:4,10:14:33.37:201,0,33	1/1:1,7:8:14.87:130,15,0	1/1:0,12:12:26.99:234,27,0
chr10	68855716	.	G	GCT	242.32	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=1.170;DP=778;FS=12.582;HRun=0;HaplotypeScore=157.2364;InbreedingCoeff=0.9077;MQ=76.25;MQ0=0;MQRankSum=0.414;QD=11.54;ReadPosRankSum=-0.814;VQSLOD=2.8021;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,123,1852	0/0:5,0:5:12.04:0,12,180	0/0:23,0:21:60.18:0,60,857	0/0:23,0:23:51.15:0,51,739	0/0:23,0:23:69.23:0,69,1057	0/0:22,0:22:63.21:0,63,961	0/0:35,0:35:99:0,99,1508	0/0:38,0:38:99:0,105,1587	0/0:36,0:36:99:0,99,1483	1/1:16,0:16:6.02:116,6,0	1/1:0,5:5:12.04:232,12,0	0/0:43,0:43:99:0,126,1907	0/0:44,0:44:99:0,126,1880	0/0:27,0:27:72.24:0,72,1101	0/0:49,0:49:99:0,141,2072	0/0:43,0:43:99:0,126,1922	0/0:21,0:21:57.18:0,57,850	0/0:19,0:19:51.17:0,51,769	0/0:14,0:14:42.14:0,42,638	0/0:16,0:16:45.15:0,45,682	0/0:73,1:73:99:0,214,3232	0/0:25,0:25:72.24:0,72,1092	0/0:15,0:15:45.15:0,45,688	0/0:37,0:37:99:0,99,1492	0/0:17,0:16:48.14:0,48,711	0/0:25,1:26:20.38:0,20,1087	0/0:24,0:24:69.23:0,69,1055	0/0:12,0:12:30.10:0,30,455
chr10	68856191	.	A	AAAACAAACAAAC	28926.85	PASS	AB=0.731;AC=37;AF=0.661;AN=56;BaseQRankSum=-2.227;DP=567;FS=8.569;HRun=0;HaplotypeScore=182.1372;InbreedingCoeff=0.8987;MQ=68.06;MQ0=2;MQRankSum=-14.398;QD=78.18;ReadPosRankSum=-0.637;VQSLOD=4.0224;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:60.19:0,60,1958	1/1:7,5:13:33.11:1789,33,0	0/0:23,0:22:33.11:0,33,905	0/0:34,0:28:23.65:0,24,1035	0/0:22,0:22:51.18:0,51,1704	1/1:7,9:16:18.06:1029,18,0	1/1:16,3:21:39.59:1673,40,0	0/0:17,0:17:27.09:0,27,676	1/1:5,11:21:27.09:1587,27,0	0/0:18,0:18:36.11:0,36,1157	0/0:19,0:19:51.18:0,51,1691	1/1:7,16:25:39.13:2124,39,0	1/1:12,13:25:30.10:1704,30,0	1/1:11,8:20:24.08:1407,24,0	1/1:8,10:19:26.83:1460,27,0	1/1:5,9:16:21.07:1222,21,0	1/1:15,11:27:31.85:1711,32,0	1/1:6,0:19:27.98:681,28,0	1/1:10,7:18:30.07:1393,30,0	1/1:15,14:29:48.16:2578,48,0	1/1:2,6:10:9.03:534,9,0	1/1:9,5:14:18.06:805,18,0	0/0:19,0:19:45.14:0,45,1428	0/0:19,0:19:45.14:0,45,1443	1/1:10,13:24:45.15:2458,45,0	0/1:12,6:19:62.28:1853,0,62	1/1:8,15:23:42.95:2383,43,0	1/1:2,8:10:9.03:535,9,0
chr10	68856820	.	T	TC	14441.10	PASS	AB=0.576;AC=39;AF=0.696;AN=56;BaseQRankSum=-14.486;DP=700;FS=11.809;HRun=5;HaplotypeScore=67.5961;InbreedingCoeff=0.9164;MQ=90.87;MQ0=0;MQRankSum=-4.643;QD=30.60;ReadPosRankSum=4.054;VQSLOD=4.7932;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,126,1344	1/1:0,7:7:15.05:197,15,0	0/0:38,0:38:71.60:0,72,896	0/0:21,0:21:39.39:0,39,440	0/0:29,0:29:74.48:0,74,798	1/1:6,27:33:72.23:947,72,0	1/1:2,14:16:36.12:474,36,0	1/1:9,24:35:72.01:819,72,0	1/1:2,24:26:63.20:829,63,0	0/0:28,0:27:84.21:0,84,903	0/0:28,0:28:75.16:0,75,792	1/1:4,21:25:60.19:777,60,0	1/1:0,29:29:78.25:1022,78,0	1/1:2,29:31:81.26:1066,81,0	1/1:2,28:30:69.22:908,69,0	1/1:2,19:21:42.14:553,42,0	1/1:2,27:29:69.22:908,69,0	1/1:0,17:17:45.15:590,45,0	1/1:4,14:18:45.10:550,45,0	1/1:1,31:32:81.07:984,81,0	1/1:1,22:23:60.20:789,60,0	1/1:1,22:23:50.95:638,51,0	0/0:27,0:27:72.16:0,72,765	0/0:11,0:11:27.07:0,27,290	1/1:0,14:14:36.12:474,36,0	0/1:5,14:19:13.38:498,0,13	1/1:3,26:29:63.20:829,63,0	1/1:0,15:15:45.15:592,45,0
chr10	68857099	.	C	CT	17667.64	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-18.662;DP=767;FS=1.560;HRun=4;HaplotypeScore=63.1481;InbreedingCoeff=0.9999;MQ=83.29;MQ0=0;MQRankSum=-4.067;QD=36.65;ReadPosRankSum=2.721;VQSLOD=5.2549;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,108,1213	1/1:0,11:11:30.10:410,30,0	0/0:29,0:29:78.22:0,78,881	0/0:14,0:14:36.06:0,36,397	0/0:35,0:35:99:0,99,1122	1/1:1,31:32:84.28:1149,84,0	1/1:3,23:26:60.20:821,60,0	0/0:47,0:47:99:0,135,1502	1/1:0,30:30:66.22:903,66,0	0/0:27,0:27:81.22:0,81,908	0/0:31,0:31:93.24:0,93,1043	1/1:1,26:27:81.27:1104,81,0	1/1:1,33:34:96.32:1313,96,0	1/1:1,22:23:66.22:903,66,0	1/1:3,30:33:75.25:1026,75,0	1/1:1,26:27:75.25:1026,75,0	1/1:3,20:23:60.20:821,60,0	0/0:22,0:22:63.15:0,63,701	1/1:1,24:25:66.86:923,67,0	1/1:0,38:38:99:1497,111,0	1/1:0,20:20:60.20:821,60,0	1/1:3,32:35:90.29:1218,90,0	0/0:27,0:27:75.21:0,75,851	0/0:17,0:17:51.15:0,51,578	1/1:2,24:26:72.24:985,72,0	1/1:2,25:27:75.25:1023,75,0	1/1:1,23:24:66.22:903,66,0	1/1:1,20:21:60.20:821,60,0
chr10	68858281	.	A	ACC	13399.46	PASS	AB=0.600;AC=39;AF=0.696;AN=56;BaseQRankSum=18.137;DP=562;FS=33.064;HRun=3;HaplotypeScore=192.4857;InbreedingCoeff=0.8631;MQ=89.07;MQ0=0;MQRankSum=-17.970;QD=40.48;ReadPosRankSum=0.150;VQSLOD=1.7577;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,126,1726	1/1:3,10:13:33.07:569,33,0	0/0:29,0:29:72.17:0,72,951	0/0:27,0:27:63.47:0,63,792	0/0:24,0:24:66.21:0,66,907	1/1:4,7:11:24.08:424,24,0	1/1:4,8:12:27.09:494,27,0	1/1:10,19:29:48.16:878,48,0	1/1:4,13:17:42.14:754,42,0	0/0:28,0:28:84.27:0,84,1142	0/0:19,0:19:54.17:0,54,738	1/1:1,19:20:54.19:987,54,0	1/1:3,24:27:75.21:1337,75,0	1/1:7,10:17:36.08:624,36,0	1/1:5,17:22:48.16:877,48,0	1/1:3,20:23:57.20:1027,57,0	1/1:2,11:13:33.11:603,33,0	1/1:2,2:4:9.03:165,9,0	1/1:8,9:17:30.10:547,30,0	1/1:4,16:20:39.13:713,39,0	1/1:4,2:6:3.01:55,3,0	1/1:0,10:10:27.09:493,27,0	0/0:19,0:19:51.17:0,51,714	0/0:37,0:37:99:0,102,1368	1/1:5,14:19:42.14:761,42,0	0/1:7,14:21:41.86:616,0,42	1/1:5,23:27:75.26:1368,75,0	1/1:0,2:2:6.02:110,6,0
chr10	68858309	.	C	CG	9943.74	PASS	AC=38;AF=0.704;AN=54;BaseQRankSum=18.477;DP=528;FS=1.466;HRun=0;HaplotypeScore=196.7527;InbreedingCoeff=0.9523;MQ=95.01;MQ0=0;MQRankSum=-18.357;QD=33.15;ReadPosRankSum=2.137;VQSLOD=4.3488;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,132,1786	1/1:0,11:11:30.01:367,30,0	0/0:36,0:36:99:0,102,1335	0/0:25,0:25:36.40:0,36,773	0/0:23,0:23:66.22:0,66,921	1/1:1,11:12:36.01:450,36,0	1/1:0,14:14:42.14:537,42,0	1/1:4,26:30:53.82:678,54,0	1/1:0,23:23:66.21:838,66,0	0/0:27,0:27:78.25:0,78,1065	0/0:17,0:17:51.16:0,51,696	1/1:1,19:20:53.06:702,53,0	1/1:0,23:23:66.21:862,66,0	1/1:0,20:20:57.19:755,57,0	1/1:1,16:17:45.01:563,45,0	1/1:0,23:23:66.21:857,66,0	1/1:0,11:11:29.91:353,30,0	1/1:0,2:2:6.02:74,6,0	1/1:2,9:11:20.40:277,20,0	1/1:0,17:17:42.03:518,42,0	1/1:0,3:3:3.01:37,3,0	1/1:2,11:13:34.79:403,35,0	0/0:20,0:20:60.19:0,60,822	0/0:35,0:35:99:0,99,1361	1/1:0,19:19:48.16:627,48,0	1/1:1,11:12:27.09:352,27,0	1/1:0,19:18:54.17:692,54,0	./.
chr10	68858571	.	CACTCCCATGG	C	12222.18	PASS	AB=0.708;AC=39;AF=0.696;AN=56;BaseQRankSum=15.827;DP=475;FS=34.102;HRun=0;HaplotypeScore=218.8468;InbreedingCoeff=0.8865;MQ=81.59;MQ0=0;MQRankSum=-15.130;QD=43.65;ReadPosRankSum=2.132;VQSLOD=2.5787;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,120,5598	1/1:6,5:11:17.05:388,17,0	0/0:22,0:22:60.20:0,60,2510	0/0:16,0:16:42.14:0,42,1834	0/0:18,0:18:51.13:0,51,2161	1/1:5,7:12:29.74:643,30,0	1/1:11,8:19:38.07:750,38,0	1/1:18,5:23:49.96:648,50,0	1/1:2,2:4:6.02:172,6,0	0/0:26,0:26:69.23:0,69,3344	0/0:19,0:19:54.19:0,54,2688	1/1:5,8:13:29.75:645,30,0	1/1:4,6:10:20.90:532,21,0	1/1:2,9:11:27.09:761,27,0	1/1:5,11:16:33.11:945,33,0	1/1:3,11:14:35.95:961,36,0	1/1:7,9:16:32.81:740,33,0	1/1:3,5:8:20.86:462,21,0	1/1:16,2:18:31.73:311,32,0	1/1:12,8:20:35.98:763,36,0	1/1:13,5:18:26.07:411,26,0	1/1:8,3:11:8.99:187,9,0	0/0:22,0:22:63.20:0,63,3141	0/0:29,0:29:81.28:0,81,4034	1/1:7,8:15:35.61:763,36,0	0/1:10,7:17:99:553,0,119	1/1:4,11:15:38.71:952,39,0	1/1:2,7:9:26.85:636,27,0
chr10	68858589	.	TGGGG	T	9031.35	PASS	AB=0.515;AC=39;AF=0.696;AN=56;BaseQRankSum=15.818;DP=432;FS=2.683;HRun=6;HaplotypeScore=159.4919;InbreedingCoeff=0.8900;MQ=81.32;MQ0=0;MQRankSum=-15.752;QD=38.76;ReadPosRankSum=3.274;VQSLOD=1.8485;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,111,2860	1/1:0,5:5:12.04:184,12,0	0/0:20,0:19:57.18:0,57,1296	0/0:17,0:17:47.90:0,48,1127	0/0:20,0:20:54.17:0,54,1415	1/1:0,12:12:33.11:517,33,0	1/1:0,13:13:36.12:581,36,0	1/1:0,14:14:39.09:646,39,0	1/1:0,8:8:18.06:313,18,0	0/0:27,0:27:75.23:0,75,1749	0/0:24,0:24:72.23:0,72,1777	1/1:0,12:12:24.08:364,24,0	1/1:0,8:8:21.07:332,21,0	1/1:0,13:13:36.12:560,36,0	1/1:0,15:15:39.13:613,39,0	1/1:0,19:19:54.15:858,54,0	1/1:0,15:15:30.09:475,30,0	1/1:0,12:12:30.10:508,30,0	1/1:0,7:7:21.07:377,21,0	1/1:0,10:10:24.08:355,24,0	1/1:0,15:15:24.08:402,24,0	1/1:0,6:6:6.02:86,6,0	0/0:25,0:25:69.23:0,69,1819	0/0:27,0:27:75.26:0,75,2010	1/1:0,11:11:24.08:359,24,0	0/1:1,16:17:40.09:582,0,40	1/1:0,14:14:39.13:595,39,0	1/1:0,7:7:21.07:323,21,0
chr10	68859350	.	C	CT	20842.28	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-0.393;DP=648;FS=1.173;HRun=1;HaplotypeScore=100.9525;InbreedingCoeff=0.9990;MQ=80.01;MQ0=0;MQRankSum=-6.064;QD=40.71;ReadPosRankSum=4.694;VQSLOD=4.8249;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:87.25:0,87,1111	1/1:0,8:8:21.03:290,21,0	0/0:23,0:23:63.18:0,63,758	0/0:29,0:29:78.23:0,78,956	0/0:18,0:18:48.14:0,48,608	1/1:0,16:16:45.15:674,45,0	1/1:0,23:23:63.21:944,63,0	1/1:0,38:38:99:1620,111,0	1/1:1,18:19:45.15:674,45,0	1/1:1,16:17:45.12:630,45,0	1/1:2,16:17:42.10:604,42,0	1/1:1,23:24:68.72:997,69,0	1/1:1,24:25:69.23:1034,69,0	1/1:2,25:27:72.24:1079,72,0	1/1:0,42:42:99:1753,117,0	1/1:0,24:24:69.23:1034,69,0	1/1:0,25:25:72.24:1079,72,0	1/1:0,18:18:54.18:809,54,0	1/1:0,21:21:63.20:913,63,0	1/1:1,15:16:42.14:628,42,0	1/1:2,46:48:99:1933,129,0	1/1:2,21:23:51.07:764,51,0	0/0:14,0:14:36.06:0,36,421	0/0:22,0:22:65.58:0,66,825	1/1:0,25:25:72.24:1079,72,0	1/1:0,15:15:45.14:654,45,0	1/1:0,26:27:81.27:1200,81,0	1/1:0,13:13:30.10:449,30,0
chr10	68859621	.	CA	C	12768.22	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=13.472;DP=714;FS=15.076;HRun=8;HaplotypeScore=70.9485;InbreedingCoeff=0.9998;MQ=75.95;MQ0=0;MQRankSum=-4.016;QD=24.74;ReadPosRankSum=3.483;VQSLOD=4.2543;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,105,1258	1/1:0,12:12:33.05:319,33,0	0/0:16,0:16:39.12:0,39,471	0/0:21,0:21:50.92:0,51,560	0/0:27,0:27:72.21:0,72,859	1/1:1,23:24:63.10:608,63,0	1/1:3,16:19:42.06:406,42,0	1/1:3,25:28:72.08:687,72,0	1/1:2,25:27:63.10:608,63,0	0/0:26,0:26:74.88:0,75,862	0/0:18,0:19:45:0,45,522	1/1:0,24:24:66.11:637,66,0	1/1:3,25:28:66.10:637,66,0	1/1:3,20:23:51.08:493,51,0	1/1:1,28:29:84.14:811,84,0	1/1:0,44:44:99:1130,117,0	1/1:1,45:46:99:1188,123,0	1/1:0,13:13:36.06:348,36,0	1/1:4,29:33:81.12:782,81,0	1/1:5,35:40:99:956,99,0	1/1:2,22:24:60.10:579,60,0	1/1:0,21:21:60.10:579,60,0	0/0:22,0:22:63.19:0,63,751	0/0:28,0:28:75.22:0,75,895	1/1:4,24:28:66.10:637,66,0	1/1:2,21:23:60.09:579,60,0	1/1:0,20:20:54.09:522,54,0	1/1:2,8:10:29.50:261,30,0
chr10	68860293	.	A	AAAG	14957.01	PASS	AB=0.552;AC=39;AF=0.696;AN=56;BaseQRankSum=-1.563;DP=392;FS=4.305;HRun=0;HaplotypeScore=49.9150;InbreedingCoeff=0.8299;MQ=68.52;MQ0=0;MQRankSum=-2.782;QD=49.69;ReadPosRankSum=2.541;VQSLOD=6.6924;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:30.10:0,30,505	1/1:0,12:12:36.04:782,36,0	0/0:9,0:7:12.05:0,12,117	0/0:8,0:7:17.98:0,18,237	0/0:27,0:27:81.27:0,81,1341	1/1:0,37:37:75.26:1746,75,0	1/1:1,8:9:12.04:276,12,0	1/1:1,32:35:99:2039,102,0	1/1:1,4:5:9.03:208,9,0	0/0:12,0:12:33.11:0,33,559	0/0:16,0:16:48.16:0,48,809	1/1:0,7:10:15.05:345,15,0	1/1:0,9:9:21.07:489,21,0	1/1:0,7:8:18.06:419,18,0	1/1:1,10:11:21.07:488,21,0	1/1:0,15:15:21.07:489,21,0	1/1:0,19:19:51.18:1185,51,0	1/1:1,16:17:33.05:716,33,0	1/1:0,15:15:45.15:903,45,0	1/1:0,19:19:51.06:1044,51,0	1/1:0,2:4:6.02:140,6,0	1/1:0,3:3:9.03:210,9,0	0/0:7,0:7:21.06:0,21,325	0/0:1,0:1:3.01:0,3,51	1/1:0,19:19:39.13:905,39,0	0/1:3,13:16:56.68:840,0,57	1/1:1,28:29:63:1453,63,0	1/1:0,5:8:12.04:280,12,0
chr10	68860682	.	T	TC	14218.12	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=16.566;DP=588;FS=6.109;HRun=0;HaplotypeScore=218.3372;InbreedingCoeff=0.9926;MQ=83.37;MQ0=0;MQRankSum=-15.774;QD=37.61;ReadPosRankSum=0.333;VQSLOD=3.6610;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,117,1578	1/1:0,10:10:21.07:319,21,0	0/0:28,0:28:78.23:0,78,1047	0/0:22,0:22:62.81:0,63,744	0/0:26,0:26:75.25:0,75,1047	1/1:0,25:25:69.23:1049,69,0	1/1:1,8:9:24.08:364,24,0	1/1:4,22:26:69.15:963,69,0	1/1:3,15:18:45.03:629,45,0	0/0:28,0:28:81.26:0,81,1092	0/0:18,0:18:54.15:0,54,721	1/1:0,19:19:57.19:865,57,0	1/1:1,15:16:48.09:692,48,0	1/1:1,18:19:48.16:729,48,0	1/1:3,21:24:63.09:903,63,0	1/1:3,24:27:75.13:1086,75,0	1/1:2,14:16:45.05:655,45,0	1/1:0,10:10:24.08:366,24,0	1/1:0,12:12:30.03:391,30,0	1/1:5,18:23:56.93:740,57,0	1/1:0,11:11:14.98:192,15,0	1/1:1,24:25:60.13:885,60,0	0/0:27,0:27:69.14:0,69,885	0/0:21,0:21:63.20:0,63,862	1/1:2,21:23:60.07:857,60,0	1/1:3,20:24:21.25:852,21,0	1/1:2,34:35:99:1450,99,0	1/1:0,5:5:15.05:229,15,0
chr10	68860696	.	A	AGCAAGCCT	40467.12	PASS	AB=0.632;AC=39;AF=0.696;AN=56;BaseQRankSum=16.809;DP=616;FS=0.000;HRun=0;HaplotypeScore=303.1261;InbreedingCoeff=0.9071;MQ=81.65;MQ0=0;MQRankSum=-17.827;QD=98.94;ReadPosRankSum=-0.950;VQSLOD=4.3842;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:93.29:0,93,2446	1/1:4,7:11:27.09:1038,27,0	0/0:31,0:31:68.87:0,69,1727	0/0:20,0:20:54.12:0,54,1232	0/0:27,0:27:69.24:0,69,1905	1/1:13,17:31:84.29:3348,84,0	1/1:8,6:14:36.12:1401,36,0	1/1:30,8:38:99:3812,108,0	1/1:14,8:22:51.17:1624,51,0	0/0:26,0:26:69.24:0,69,1916	0/0:18,0:18:51.18:0,51,1394	1/1:7,10:18:51.17:1968,51,0	1/1:7,11:18:42.14:1688,42,0	1/1:7,9:17:39.13:1510,39,0	1/1:7,17:24:66.21:2639,66,0	1/1:13,18:31:81.28:3329,81,0	1/1:3,12:15:33.11:1447,33,0	1/1:4,4:8:18.06:738,18,0	1/1:11,5:16:39.10:1366,39,0	1/1:10,12:22:60.21:2283,60,0	1/1:7,4:11:12.04:473,12,0	1/1:17,11:28:63.21:2488,63,0	0/0:26,0:26:63.22:0,63,1753	0/0:25,0:25:69.19:0,69,1798	1/1:9,14:23:57.20:2170,57,0	0/1:10,14:24:23.76:2295,0,24	1/1:9,21:32:99:4195,99,0	1/1:3,2:5:15.05:656,15,0
chr10	68860723	.	G	GA	5778.47	PASS	AB=0.679;AC=39;AF=0.696;AN=56;BaseQRankSum=15.851;DP=518;FS=2.896;HRun=5;HaplotypeScore=274.8669;InbreedingCoeff=0.8804;MQ=82.21;MQ0=0;MQRankSum=-15.774;QD=17.35;ReadPosRankSum=4.267;VQSLOD=2.1626;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:75.18:0,75,799	1/1:6,5:11:12.03:131,12,0	0/0:23,0:23:51.09:0,51,522	0/0:21,0:21:57.03:0,57,588	0/0:21,0:21:48.11:0,48,516	1/1:10,14:24:45.12:489,45,0	1/1:3,11:14:30.08:327,30,0	1/1:29,7:36:21.06:234,21,0	1/1:5,12:17:36.10:395,36,0	0/0:21,0:21:60.11:0,60,623	0/0:22,0:22:63.16:0,63,677	1/1:6,6:12:18.05:196,18,0	1/1:4,6:10:18.05:196,18,0	1/1:8,9:17:24.06:261,24,0	1/1:6,15:21:48.13:527,48,0	1/1:6,17:23:51.14:558,51,0	1/1:7,4:11:9.50:102,9,0	1/1:1,2:3:6.02:67,6,0	1/1:4,2:6:6.02:67,6,0	1/1:4,17:21:45.59:490,46,0	1/1:3,5:8:15.04:164,15,0	1/1:9,15:24:42.06:439,42,0	0/0:25,0:25:57.12:0,57,604	0/0:24,0:24:66.17:0,66,709	1/1:10,8:18:18.05:195,18,0	0/1:10,9:19:5.26:221,0,5	1/1:15,17:32:48.12:519,48,0	1/1:0,6:6:18.05:199,18,0
chr10	68860730	.	A	ATC	5742.44	PASS	AB=0.591;AC=39;AF=0.696;AN=56;BaseQRankSum=16.113;DP=382;FS=0.389;HRun=0;HaplotypeScore=197.7340;InbreedingCoeff=0.8323;MQ=87.40;MQ0=0;MQRankSum=-15.807;QD=27.48;ReadPosRankSum=6.366;VQSLOD=5.3450;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:84.29:0,84,1347	1/1:1,5:6:12.03:131,12,0	0/0:17,0:17:44.88:0,45,580	0/0:20,0:20:47.11:0,47,748	0/0:18,0:18:48.15:0,48,759	1/1:1,15:16:29.14:466,29,0	1/1:1,11:12:30.08:320,30,0	1/1:0,7:7:21.06:248,21,0	1/1:4,12:16:13.14:360,13,0	0/0:21,0:21:63.19:0,63,1000	0/0:22,0:22:63.22:0,63,1026	1/1:2,6:8:18.05:193,18,0	1/1:1,6:7:1.75:173,2,0	1/1:0,9:9:24.06:254,24,0	1/1:0,16:16:48.12:513,48,0	1/1:2,17:19:34.80:532,35,0	1/1:0,4:4:12.03:140,12,0	1/1:0,2:2:6.02:69,6,0	1/1:0,2:2:6.02:70,6,0	1/1:0,17:17:51.14:562,51,0	1/1:1,5:6:15.04:160,15,0	1/1:1,15:16:35.73:438,36,0	0/0:23,0:23:60.20:0,60,975	0/0:23,0:23:66.23:0,66,1070	1/1:1,8:9:18.05:193,18,0	0/1:4,9:13:22.34:223,0,22	1/1:1,17:18:31.81:492,32,0	1/1:0,6:6:18.05:205,18,0
chr10	68860731	.	G	GTTAGTT	23581.89	PASS	AB=0.688;AC=39;AF=0.696;AN=56;BaseQRankSum=16.567;DP=480;FS=1.154;HRun=0;HaplotypeScore=223.0034;InbreedingCoeff=0.8977;MQ=77.51;MQ0=0;MQRankSum=-16.706;QD=76.07;ReadPosRankSum=1.308;VQSLOD=5.1046;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:84.22:0,84,2007	1/1:8,5:13:36.12:955,36,0	0/0:14,0:14:38.91:0,39,867	0/0:20,0:21:54.11:0,54,1228	0/0:16,0:16:45.15:0,45,1131	1/1:5,15:20:60.21:1689,60,0	1/1:5,11:16:42.14:1208,42,0	1/1:16,7:23:63.22:1722,63,0	1/1:6,12:19:51.18:1403,51,0	0/0:21,0:21:63.22:0,63,1533	0/0:22,0:22:63.22:0,63,1614	1/1:8,6:14:17.15:1071,17,0	1/1:7,6:13:33.11:952,33,0	1/1:2,9:11:30.10:866,30,0	1/1:5,16:21:60.21:1704,60,0	1/1:8,17:25:72.20:1914,72,0	1/1:1,4:5:15.05:444,15,0	1/1:1,2:3:9.03:266,9,0	1/1:4,2:5:12.04:351,12,0	1/1:6,17:23:66.23:1931,66,0	1/1:6,5:11:30.02:663,30,0	1/1:8,15:23:66.23:1894,66,0	0/0:23,0:23:60.21:0,60,1510	0/0:23,0:23:69.22:0,69,1684	1/1:6,8:14:33.10:905,33,0	0/1:12,9:22:19.69:1416,0,20	1/1:4,17:21:57.20:1611,57,0	1/1:1,6:7:21.07:618,21,0
chr10	68860901	.	T	TGA	19776.56	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=13.788;DP=633;FS=4.776;HRun=0;HaplotypeScore=124.7983;InbreedingCoeff=0.9916;MQ=68.44;MQ0=1;MQRankSum=-7.112;QD=47.77;ReadPosRankSum=2.729;VQSLOD=5.8850;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,114,1671	1/1:0,10:10:24.08:406,24,0	0/0:20,0:18:45.08:0,45,600	0/0:17,0:15:29.63:0,30,364	0/0:29,0:29:87.28:0,87,1260	1/1:0,17:17:48.16:896,48,0	1/1:1,27:27:63.22:1179,63,0	1/1:1,23:24:69.23:1261,69,0	1/1:3,12:15:45.15:838,45,0	0/0:38,0:38:99:0,108,1571	0/0:17,0:17:51.17:0,51,750	1/1:2,24:26:66.23:1234,66,0	1/1:3,25:28:66.18:1194,66,0	1/1:3,18:21:42.14:785,42,0	1/1:2,28:31:90.31:1663,90,0	1/1:2,21:23:57.20:1065,57,0	1/1:3,18:21:51.17:933,51,0	1/1:1,14:15:39.13:730,39,0	1/1:1,16:17:51.17:906,51,0	1/1:1,13:14:42.14:786,42,0	1/1:0,21:22:45.15:821,45,0	1/1:1,22:23:60.20:1099,60,0	0/0:24,0:23:66.21:0,66,947	0/0:34,1:35:46.15:0,46,1398	1/1:1,17:18:51.65:956,52,0	1/1:2,17:19:9.99:895,10,0	1/1:1,23:24:69.24:1290,69,0	1/1:5,13:18:45.15:840,45,0
chr10	68861367	.	C	CGT	2270.71	PASS	AB=1.000;AC=39;AF=0.750;AN=52;BaseQRankSum=5.285;DP=460;FS=7.926;HRun=0;HaplotypeScore=162.4406;InbreedingCoeff=0.2339;MQ=56.61;MQ0=1;MQRankSum=-2.343;QD=6.09;ReadPosRankSum=-2.402;VQSLOD=2.4838;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:36,3:39:40.26:1035,40,0	1/1:0,0:4:3:27,3,0	0/0:11,0:9:6:0,6,53	0/1:16,0:14:39.15:39,0,68	1/1:5,18:24:17.52:232,18,0	1/1:17,0:17:3.57:30,4,0	1/1:16,0:16:0.47:1,0,0	1/1:14,0:12:11.62:66,12,0	1/1:12,0:12:9.12:54,9,0	0/1:18,0:18:99:136,0,102	0/1:16,0:16:42.56:115,0,43	1/1:21,0:22:15.40:119,15,0	1/1:10,0:10:11.21:72,11,0	1/1:20,0:21:15.36:112,15,0	1/1:20,0:20:5.93:43,6,0	1/1:14,0:16:11.96:95,12,0	1/1:20,0:21:2.90:44,3,0	0/1:13,0:13:20.01:36,0,20	1/1:17,0:16:6.01:52,6,0	1/1:11,0:11:2.94:18,3,0	0/1:7,0:7:0:0,0,0	./.	0/0:10,0:10:18.02:0,18,202	0/0:42,0:42:86.95:0,87,923	./.	0/1:17,0:17:10.10:23,0,10	1/1:13,0:14:11.58:68,12,0	0/1:7,0:7:0.99:4,0,1
chr10	68861373	.	TGTGTGCGCGCGCGCGC	T	4284.65	PASS	AB=0.860;AC=25;AF=0.463;AN=54;BaseQRankSum=-0.607;DP=430;FS=27.765;HRun=0;HaplotypeScore=226.7075;InbreedingCoeff=0.0238;MQ=54.55;MQ0=1;MQRankSum=-5.820;QD=16.94;ReadPosRankSum=-5.244;VQSLOD=0.6843;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:91.51:0,92,5512	0/0:2,0:2:3.01:0,3,72	0/0:11,0:8:20.93:0,21,263	0/1:15,0:13:99:138,0,343	0/0:24,0:24:25.01:0,25,1519	1/1:10,2:13:12.04:442,12,0	1/1:9,2:16:3.01:36,3,0	1/1:0,9:12:35.40:729,35,0	1/1:7,3:11:1.07:488,1,0	0/0:19,0:19:57.18:0,57,3048	0/0:15,0:15:39.07:0,39,2378	0/1:16,1:20:61.46:426,0,61	0/1:6,2:9:46.12:347,0,46	0/1:17,1:19:65.30:65,0,74	1/1:15,1:19:17.92:238,18,0	0/1:10,0:12:6.19:6,0,82	0/1:15,1:18:83.61:95,0,84	0/1:8,0:10:61.57:62,0,244	0/1:17,0:16:99:123,0,137	0/0:5,0:6:0:0,0,0	1/1:2,3:6:0.47:1,0,0	./.	0/0:10,0:10:21.06:0,21,1337	0/0:43,0:43:91.69:0,92,6040	1/1:10,0:15:2.99:24,3,0	0/1:13,1:16:99:427,0,293	0/1:11,2:15:99:340,0,103	0/1:4,1:7:61.29:298,0,61
chr10	68861377	.	T	TGC	1142.08	PASS	AB=1.000;AC=13;AF=0.283;AN=46;BaseQRankSum=-1.612;DP=402;FS=6.534;HRun=0;HaplotypeScore=157.0283;InbreedingCoeff=0.3014;MQ=51.20;MQ0=2;MQRankSum=4.152;QD=7.42;ReadPosRankSum=-0.465;VQSLOD=2.5327;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:39,0:39:19.04:403,0,19	1/1:2,0:2:2.50:9,2,0	./.	0/0:12,0:12:7.31:0,7,39	0/1:24,0:24:23.78:83,0,24	0/0:12,0:12:8.28:0,8,40	0/0:15,0:15:2.92:0,3,17	0/0:14,0:12:13.88:0,14,65	0/0:11,0:11:10.17:0,10,54	1/1:10,12:22:34.68:385,35,0	1/1:14,1:15:29.07:365,29,0	0/0:18,0:18:2.95:0,3,45	0/0:7,0:7:2.21:0,2,28	0/1:18,0:18:5.56:6,0,10	./.	1/1:11,0:11:7.36:23,7,0	0/0:18,0:17:1.02:0,1,33	0/1:8,0:9:3.10:3,0,88	0/0:14,0:13:10.79:0,11,82	./.	0/0:5,0:4:0:0,0,0	./.	0/0:10,0:10:17.88:0,18,186	0/0:43,0:43:63.07:0,63,672	./.	0/1:14,0:14:2.10:2,0,96	0/0:14,0:14:7.89:0,8,77	0/0:7,0:7:17.34:0,17,97
chr10	68861412	.	G	GGA	2199.66	PASS	AB=0.810;AC=44;AF=0.880;AN=50;BaseQRankSum=4.419;DP=436;FS=9.369;HRun=0;HaplotypeScore=143.1601;InbreedingCoeff=0.2557;MQ=43.12;MQ0=14;MQRankSum=-3.960;QD=5.68;ReadPosRankSum=-2.532;VQSLOD=2.3679;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:24,5:51:17.50:159,18,0	1/1:4,0:4:2.24:9,2,0	0/0:12,0:3:2.90:0,3,16	./.	0/1:22,2:25:66.37:242,0,66	1/1:9,0:10:14.76:89,15,0	1/1:9,0:9:8.98:77,9,0	1/1:22,0:18:17.98:171,18,0	1/1:6,0:7:4.79:27,5,0	1/1:13,1:16:18.02:194,18,0	1/1:12,0:20:18.12:139,18,0	1/1:12,0:18:23.34:163,23,0	1/1:6,0:9:8.97:73,9,0	1/1:8,0:14:8.56:72,9,0	1/1:6,0:10:14.36:85,14,0	1/1:11,0:17:17.66:135,18,0	1/1:7,0:12:17.76:155,18,0	0/1:8,0:8:0:0,0,0	./.	1/1:7,0:11:8.71:61,9,0	1/1:8,0:4:2.98:22,3,0	./.	0/1:8,5:14:0.09:0,0,0	0/1:24,27:53:24.56:25,0,139	1/1:8,0:11:12.38:55,12,0	1/1:11,0:13:19.22:155,19,0	1/1:9,0:12:15.59:138,16,0	1/1:4,0:5:8.82:62,9,0
chr10	68861448	.	T	TGTGA	6165.49	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=4.650;DP=534;FS=20.939;HRun=0;HaplotypeScore=110.9302;InbreedingCoeff=0.8136;MQ=72.41;MQ0=4;MQRankSum=-9.098;QD=19.95;ReadPosRankSum=3.066;VQSLOD=3.0800;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:37.76:0,38,490	1/1:0,5:6:3.01:82,3,0	0/0:31,0:25:71.49:0,71,1154	0/0:35,0:24:52.63:0,53,858	0/0:25,0:25:61.42:0,61,957	1/1:4,18:21:24.08:591,24,0	1/1:3,16:22:9.03:195,9,0	0/0:18,0:18:22.96:0,23,359	1/1:6,1:8:8.97:100,9,0	0/0:15,0:15:16.76:0,17,499	0/0:18,0:18:0.99:0,1,523	1/1:2,25:27:24.07:529,24,0	1/1:3,11:15:18.06:383,18,0	1/1:2,12:15:8.96:175,9,0	1/1:0,21:21:14.98:322,15,0	1/1:1,24:25:18.04:395,18,0	1/1:3,12:16:27.09:625,27,0	1/1:0,0:12:2.98:21,3,0	1/1:6,4:9:17.92:219,18,0	1/1:0,19:19:18.04:345,18,0	1/1:3,5:7:3.01:82,3,0	1/1:1,10:12:3.01:53,3,0	0/0:16,0:16:29.66:0,30,577	0/0:38,0:38:63.05:0,63,1161	1/1:3,21:26:15.02:283,15,0	1/1:1,18:19:51.17:1195,51,0	1/1:1,12:14:15.05:388,15,0	1/1:3,1:12:11.76:182,12,0
chr10	68862754	.	C	CAAAAAAAAAAAAA	10402.61	PASS	AB=0.967;AC=24;AF=0.429;AN=56;BaseQRankSum=12.963;DP=367;FS=19.789;HRun=1;HaplotypeScore=160.2959;InbreedingCoeff=-0.0559;MQ=64.43;MQ0=0;MQRankSum=-14.361;QD=54.18;ReadPosRankSum=0.849;VQSLOD=0.1589;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,102,3653	1/1:1,0:1:3.01:58,3,0	0/0:10,0:10:27.05:0,27,692	0/0:20,0:19:40.30:0,40,1549	0/0:20,0:20:60.17:0,60,2039	0/1:11,0:11:19.43:736,0,19	0/1:8,1:16:3.23:703,0,3	1/1:15,0:16:5.02:332,5,0	0/1:9,0:9:72.21:538,0,72	0/0:30,0:30:90.28:0,90,2931	0/0:16,0:16:48.14:0,48,1512	0/1:10,0:10:67.27:605,0,67	0/1:5,0:5:61.27:97,0,61	0/1:9,0:9:31.48:462,0,31	0/1:11,0:13:62.93:687,0,63	1/1:13,0:13:33.09:1001,33,0	0/1:12,0:12:36.45:623,0,36	0/0:13,0:13:39.12:0,39,1376	0/1:12,0:12:39.04:638,0,39	0/1:14,0:14:58.51:789,0,59	0/1:4,0:4:15.74:156,0,16	0/1:8,0:8:53.25:366,0,53	0/0:17,0:17:48.10:0,48,1387	0/0:14,0:14:42.14:0,42,1431	1/1:13,0:13:37.37:1380,37,0	0/1:8,0:8:99:356,0,159	0/1:16,0:16:60.44:705,0,60	1/1:2,0:2:6.02:169,6,0
chr10	68862756	.	G	GAAAAAAAAAAA	28703.02	PASS	AB=1.000;AC=37;AF=0.661;AN=56;BaseQRankSum=7.809;DP=465;FS=2.206;HRun=7;HaplotypeScore=180.4823;InbreedingCoeff=0.8938;MQ=58.80;MQ0=0;MQRankSum=-15.885;QD=99.32;ReadPosRankSum=-6.641;VQSLOD=-0.1670;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,102,2893	1/1:4,0:4:11.40:361,11,0	0/0:11,0:11:23.92:0,24,533	0/0:19,0:19:39.72:0,40,1204	0/0:20,0:20:57.13:0,57,1555	1/1:17,1:21:48.16:2200,48,0	1/1:16,0:16:30.10:1448,30,0	1/1:14,0:24:69.23:1381,69,0	1/1:17,1:20:42.14:2143,42,0	0/0:30,0:30:78.15:0,78,2196	0/0:16,0:16:42.03:0,42,1213	1/1:12,3:14:33.11:1680,33,0	1/1:9,0:9:21.04:812,21,0	1/1:14,0:14:36.11:1647,36,0	1/1:17,2:21:48.16:2124,48,0	1/1:12,1:19:48.16:2135,48,0	1/1:11,1:16:33.11:1532,33,0	0/0:15,0:15:35.99:0,36,1051	1/1:14,0:14:27.07:1135,27,0	1/1:16,0:16:42.14:1701,42,0	1/1:3,0:3:6.02:247,6,0	1/1:11,0:14:30.10:1204,30,0	0/0:15,0:15:39.11:0,39,1086	0/0:14,0:14:42.14:0,42,1169	1/1:13,3:20:60.20:2759,60,0	0/1:18,0:18:45.42:1622,0,45	1/1:15,2:21:45.15:2011,45,0	1/1:4,0:4:12.04:559,12,0
chr10	68863000	.	G	GTT	6278.57	PASS	AB=0.706;AC=39;AF=0.696;AN=56;BaseQRankSum=10.029;DP=701;FS=1.605;HRun=10;HaplotypeScore=102.3479;InbreedingCoeff=0.7853;MQ=68.33;MQ0=0;MQRankSum=-2.996;QD=12.46;ReadPosRankSum=0.345;VQSLOD=2.9769;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:47:99:0,126,1235	1/1:4,2:19:29.97:327,30,0	0/1:18,0:15:2.25:2,0,143	0/0:18,0:18:30.72:0,31,288	0/0:28,0:29:71.81:0,72,712	1/1:1,1:16:18.01:168,18,0	1/1:5,1:24:42.02:414,42,0	0/1:7,0:30:5.24:177,0,5	1/1:3,1:15:18.03:196,18,0	0/0:31,0:31:66.96:0,67,663	0/0:19,0:19:42.02:0,42,418	1/1:5,1:32:41.92:423,42,0	1/1:9,0:24:18.01:166,18,0	1/1:4,0:28:21.02:200,21,0	1/1:2,1:29:35.94:366,36,0	1/1:2,2:28:46.96:465,47,0	1/1:5,0:30:51.06:484,51,0	1/1:3,0:23:49.78:174,50,0	1/1:7,3:24:45.17:457,45,0	1/1:2,1:27:50.45:446,50,0	1/1:4,0:26:42.01:391,42,0	1/1:5,1:27:44.45:434,44,0	0/0:25,0:25:54.04:0,54,542	0/0:27,0:28:74.84:0,75,728	1/1:5,0:24:27.04:266,27,0	0/1:4,1:21:45.62:323,0,46	1/1:9,0:32:33.04:314,33,0	1/1:2,0:5:9.01:86,9,0
chr10	68864335	.	A	AAC	25801.20	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-2.179;DP=692;FS=0.000;HRun=0;HaplotypeScore=86.4064;InbreedingCoeff=0.9991;MQ=80.22;MQ0=4;MQRankSum=-2.800;QD=52.76;ReadPosRankSum=3.634;VQSLOD=5.2999;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:63.19:0,63,998	1/1:0,14:15:36.12:731,36,0	0/0:23,0:23:39.53:0,40,934	0/0:16,0:16:26.49:0,26,618	0/0:40,0:40:99:0,111,1804	1/1:0,38:38:99:2131,105,0	1/1:0,25:25:66.23:1341,66,0	1/1:1,33:35:99:1977,102,0	1/1:1,15:17:33.11:670,33,0	0/0:21,0:21:63.22:0,63,1028	0/0:24,0:24:66.21:0,66,1039	1/1:0,19:20:54.19:1097,54,0	1/1:1,24:26:69.23:1377,69,0	1/1:4,15:18:45.15:913,45,0	1/1:0,26:27:69.24:1402,69,0	1/1:0,27:28:78.27:1584,78,0	1/1:2,26:28:75.26:1497,75,0	1/1:1,21:21:63.22:1277,63,0	1/1:5,16:24:60.16:1071,60,0	1/1:1,36:35:96.29:1904,96,0	1/1:1,17:19:48.16:975,48,0	1/1:0,18:18:48.16:973,48,0	0/0:24,0:24:69.24:0,69,1115	0/0:32,0:32:93.32:0,93,1512	1/1:0,24:24:63.22:1277,63,0	1/1:1,24:25:23.29:1351,23,0	1/1:0,32:33:84.29:1706,84,0	1/1:0,9:9:27.09:547,27,0
chr10	68864833	.	TG	T	8262.18	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=15.709;DP=456;FS=12.971;HRun=3;HaplotypeScore=103.4033;InbreedingCoeff=0.9760;MQ=53.37;MQ0=4;MQRankSum=-4.749;QD=30.26;ReadPosRankSum=4.346;VQSLOD=3.3792;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,123,1749	1/1:0,7:7:18.06:223,18,0	0/0:16,0:13:24.08:0,24,328	0/0:16,2:16:10.91:0,11,469	0/0:29,0:29:81.23:0,81,1142	1/1:0,10:10:30.09:372,30,0	1/1:0,4:4:12.04:149,12,0	1/1:1,15:15:39.12:481,39,0	1/1:2,17:18:51.09:606,51,0	0/0:25,0:25:72.24:0,72,1037	0/0:14,0:14:33.11:0,33,471	1/1:0,21:20:51.16:632,51,0	1/1:0,13:13:36.11:446,36,0	1/1:0,20:20:57.18:705,57,0	1/1:0,12:12:30.09:368,30,0	1/1:0,12:12:36.11:443,36,0	1/1:0,11:11:30.08:359,30,0	1/1:1,8:9:21.07:260,21,0	1/1:4,12:12:24.08:297,24,0	1/1:1,15:15:39.12:479,39,0	1/1:1,11:12:18.06:223,18,0	1/1:1,6:7:12.04:149,12,0	0/0:10,0:10:30.10:0,30,431	0/0:28,0:28:81.27:0,81,1157	1/1:0,15:15:36.11:441,36,0	1/1:3,19:21:57.18:704,57,0	1/1:3,22:25:60.19:741,60,0	1/1:0,6:6:15.05:186,15,0
chr10	68864940	.	CT	C	15005.78	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=16.981;DP=607;FS=3.533;HRun=2;HaplotypeScore=162.5663;InbreedingCoeff=0.9994;MQ=59.76;MQ0=6;MQRankSum=-3.806;QD=35.06;ReadPosRankSum=1.520;VQSLOD=4.4217;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:72.17:0,72,1014	1/1:0,11:11:33.11:428,33,0	0/0:28,0:16:40.88:0,41,650	0/0:20,0:10:30.10:0,30,449	0/0:29,0:29:84.28:0,84,1259	1/1:0,21:21:54.18:701,54,0	1/1:0,13:13:39.13:506,39,0	1/1:2,32:33:93.30:1207,93,0	1/1:0,16:16:45.15:584,45,0	0/0:32,0:32:90.30:0,90,1349	0/0:24,0:24:66.21:0,66,966	1/1:1,32:33:87.28:1129,87,0	1/1:1,16:17:48.16:622,48,0	1/1:2,21:23:60.19:778,60,0	1/1:1,25:26:69.22:895,69,0	1/1:0,17:17:48.16:623,48,0	1/1:0,14:14:42.14:545,42,0	1/1:1,17:18:51.17:662,51,0	1/1:1,14:15:42.14:545,42,0	1/1:1,36:37:99:1285,99,0	1/1:0,15:15:33.11:428,33,0	1/1:0,17:17:51.17:662,51,0	0/0:9,0:9:27.09:0,27,405	0/0:13,0:13:39.12:0,39,566	1/1:2,20:22:54.18:701,54,0	1/1:3,23:26:27.24:837,27,0	1/1:2,36:38:99:1323,102,0	1/1:0,15:15:42.14:545,42,0
chr10	68865497	.	A	AAAAC	3099.90	PASS	AB=0.982;AC=8;AF=0.148;AN=54;BaseQRankSum=-7.462;DP=681;FS=1.781;HRun=0;HaplotypeScore=203.1461;InbreedingCoeff=0.6331;MQ=64.45;MQ0=2;MQRankSum=6.146;QD=25.83;ReadPosRankSum=-0.229;VQSLOD=3.1820;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:58.38:0,58,1204	0/0:9,0:9:9.01:0,9,84	0/0:37,0:33:26.83:0,27,338	0/0:27,0:23:14.80:0,15,232	0/0:43,0:43:81.26:0,81,1263	0/0:19,0:18:20.39:0,20,176	0/0:22,0:22:13.75:0,14,100	1/1:19,0:19:21.05:259,21,0	0/0:30,0:30:40.91:0,41,352	1/1:9,18:30:18.54:1351,19,0	1/1:6,23:30:69.15:1539,69,0	0/0:19,0:19:26.62:0,27,234	0/0:15,0:15:18.02:0,18,168	0/0:34,0:34:29.23:0,29,258	0/0:15,0:15:19.61:0,20,155	0/0:24,0:24:36.90:0,37,309	0/0:21,0:21:8.05:0,8,47	0/1:14,0:14:64.35:64,0,71	0/0:15,0:15:12:0,12,108	0/0:36,0:36:29.10:0,29,382	./.	0/0:23,0:23:19.84:0,20,172	0/0:21,0:21:42.04:0,42,558	0/0:30,0:30:43.80:0,44,869	0/0:27,0:27:37.65:0,38,342	0/1:26,1:27:38.41:38,0,247	0/0:31,0:31:26.97:0,27,251	0/0:5,0:5:6:0,6,52
chr10	68865516	.	ACAAACAAACAAAT	A	17879.66	PASS	AB=0.787;AC=36;AF=0.643;AN=56;BaseQRankSum=11.239;DP=659;FS=20.638;HRun=0;HaplotypeScore=240.9160;InbreedingCoeff=0.8056;MQ=50.17;MQ0=3;MQRankSum=-13.976;QD=45.73;ReadPosRankSum=3.457;VQSLOD=2.9492;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:94.05:0,94,5302	1/1:3,5:8:9.03:347,9,0	0/0:33,0:25:59.41:0,59,2214	0/0:33,0:24:54.65:0,55,1283	0/0:41,0:41:99:0,108,5667	1/1:4,15:19:24.08:835,24,0	1/1:5,13:18:24.07:660,24,0	0/1:27,0:27:99:240,0,349	1/1:6,23:29:54.13:1717,54,0	0/0:25,0:25:72.24:0,72,3672	0/0:29,0:29:81.28:0,81,3870	1/1:4,13:17:30.10:1138,30,0	1/1:3,13:16:18.06:694,18,0	1/1:9,16:25:36.11:1209,36,0	1/1:2,13:15:24.08:832,24,0	1/1:2,22:24:45.15:1658,45,0	1/1:8,13:21:9.02:341,9,0	0/0:14,0:14:18.48:0,18,270	1/1:3,13:16:33.02:663,33,0	1/1:6,29:35:66.21:2060,66,0	1/1:12,0:11:12.02:188,12,0	1/1:6,14:20:27.08:866,27,0	0/0:19,0:19:54.16:0,54,2201	0/0:31,0:31:62.18:0,62,3857	1/1:7,21:28:45.15:1578,45,0	0/1:7,20:27:99:1460,0,110	1/1:6,25:31:38.98:1161,39,0	1/1:0,3:3:6.02:232,6,0
chr10	68865524	.	A	AG	2874.52	PASS	AB=0.893;AC=33;AF=0.589;AN=56;BaseQRankSum=12.030;DP=615;FS=31.265;HRun=0;HaplotypeScore=163.9777;InbreedingCoeff=0.7356;MQ=56.31;MQ0=2;MQRankSum=-14.662;QD=8.98;ReadPosRankSum=5.855;VQSLOD=1.9894;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,109,1488	1/1:5,0:5:7.11:24,7,0	0/0:36,0:29:70.44:0,70,970	0/0:34,0:24:71.27:0,71,882	0/0:41,0:41:99:0,120,1659	1/1:15,1:15:20.25:133,20,0	1/1:13,3:16:22.16:227,22,0	0/0:28,0:28:84.07:0,84,899	1/1:24,4:28:46.51:355,47,0	0/0:26,0:26:77.80:0,78,768	0/0:29,0:29:83.35:0,83,722	1/1:14,0:14:18.22:109,18,0	1/1:14,0:14:13.93:46,14,0	1/1:17,2:19:31.94:204,32,0	1/1:13,1:14:20.89:163,21,0	1/1:22,1:23:38.97:260,39,0	1/1:13,3:16:8.39:78,8,0	0/0:3,0:12:20.55:0,21,181	0/1:14,1:15:85.34:85,0,140	1/1:29,4:33:55.77:458,56,0	0/1:7,2:8:54.88:55,0,103	1/1:14,2:16:22.93:169,23,0	0/0:19,0:19:57.18:0,57,778	0/0:31,0:31:78.41:0,78,1050	1/1:23,2:25:40.48:251,40,0	0/1:22,2:24:99:164,0,125	1/1:26,4:30:37.07:289,37,0	1/1:3,0:3:5.25:23,5,0
chr10	68865528	.	AT	A	3450.36	PASS	AB=0.917;AC=39;AF=0.696;AN=56;BaseQRankSum=15.259;DP=579;FS=16.209;HRun=1;HaplotypeScore=154.4028;InbreedingCoeff=0.8876;MQ=63.48;MQ0=2;MQRankSum=-12.600;QD=10.75;ReadPosRankSum=3.519;VQSLOD=0.5462;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,1:38:63.89:0,64,1451	1/1:5,0:5:8.23:36,8,0	0/0:39,0:32:84.68:0,85,1222	0/0:35,1:26:62.83:0,63,970	0/0:41,0:41:99:0,120,1867	1/1:15,0:14:18.84:79,19,0	1/1:13,0:13:13.22:54,13,0	1/1:0,26:26:77.92:994,78,0	1/1:23,0:23:37.80:160,38,0	0/0:26,0:26:22.90:0,23,605	0/0:30,0:30:14.89:0,15,645	1/1:13,0:13:27.56:147,28,0	1/1:14,0:14:16.47:71,16,0	1/1:16,0:16:27.20:115,27,0	1/1:13,0:13:18.59:77,19,0	1/1:22,0:23:38.10:159,38,0	1/1:13,0:13:7.56:29,8,0	0/1:10,1:11:2.27:93,0,2	1/1:14,0:14:26.49:298,26,0	1/1:29,0:29:48.56:205,49,0	1/1:2,5:6:12.04:167,12,0	1/1:14,0:14:18.96:80,19,0	0/0:17,0:17:51.08:0,51,719	0/0:29,1:31:23.38:0,23,1066	1/1:21,0:22:35.78:152,36,0	1/1:21,0:21:33.16:387,33,0	1/1:26,0:26:27.64:125,28,0	1/1:3,0:3:5.49:24,5,0
chr10	68865596	.	GACAGACAGACAGACAGACACACACAC	G	23383.87	PASS	AC=36;AF=0.692;AN=52;BaseQRankSum=14.073;DP=512;FS=18.355;HRun=0;HaplotypeScore=347.5890;InbreedingCoeff=0.9290;MQ=50.70;MQ0=14;MQRankSum=-11.648;QD=74.23;ReadPosRankSum=3.608;VQSLOD=2.7743;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:34:86.51:0,87,8289	./.	0/0:19,0:15:36.10:0,36,965	0/0:30,0:23:53.40:0,53,1562	0/0:22,0:22:60.17:0,60,3871	1/1:9,5:14:9.03:514,9,0	1/1:14,2:16:9.03:353,9,0	1/1:0,24:24:72.11:1227,72,0	1/1:8,9:18:30.10:1636,30,0	0/0:20,0:19:51.15:0,51,4596	0/0:16,0:14:39.11:0,39,2581	1/1:4,11:16:33.11:1759,33,0	1/1:10,10:21:30.10:1634,30,0	1/1:4,6:11:12.04:717,12,0	1/1:10,13:22:33.11:2174,33,0	1/1:8,12:19:21.07:1295,21,0	1/1:8,5:13:24.08:1093,24,0	./.	1/1:7,3:9:24.08:912,24,0	1/1:18,11:29:24.06:1594,24,0	1/1:6,0:4:3.01:109,3,0	1/1:7,6:13:12.04:747,12,0	0/0:12,0:12:36.11:0,36,3075	0/0:34,0:34:78.27:0,78,7774	1/1:8,22:30:48.16:2929,48,0	1/1:13,8:20:42.06:2003,42,0	1/1:15,11:26:42.14:2324,42,0	1/1:2,2:4:9.03:364,9,0
chr10	68865612	.	GAC	G	1206.18	PASS	AB=0.930;AC=33;AF=0.635;AN=52;BaseQRankSum=11.088;DP=514;FS=19.352;HRun=0;HaplotypeScore=254.8747;InbreedingCoeff=0.6379;MQ=39.85;MQ0=19;MQRankSum=-8.220;QD=3.71;ReadPosRankSum=0.404;VQSLOD=1.2311;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,1:33:37.43:0,37,894	./.	0/0:17,0:8:11.86:0,12,92	0/0:26,0:13:11.70:0,12,91	0/0:19,0:19:11.59:0,12,445	1/1:10,3:13:0.54:10,1,0	0/1:11,2:13:0:0,0,0	0/1:26,0:26:2.89:89,0,3	1/1:15,0:15:17.04:84,17,0	0/0:25,1:24:22.92:0,23,627	0/0:14,0:13:20.10:0,20,273	1/1:17,5:22:21.05:123,21,0	1/1:20,5:25:9.85:60,10,0	1/1:8,4:12:5.51:27,6,0	1/1:21,1:20:28.53:159,29,0	1/1:20,1:20:14.01:65,14,0	1/1:11,0:11:2.18:32,2,0	./.	1/1:9,2:10:4.47:68,4,0	1/1:19,5:24:20.93:110,21,0	1/1:8,2:7:2.96:19,3,0	1/1:11,3:14:8.68:55,9,0	0/1:11,1:12:13.41:13,0,255	0/0:39,0:38:69.49:0,69,1083	1/1:29,3:32:31.72:187,32,0	1/1:15,4:18:20.69:159,21,0	1/1:20,3:22:17.32:123,17,0	0/0:2,0:2:1.55:0,2,4
chr10	68865659	.	GCA	G	2495.29	PASS	AB=0.615;AC=21;AF=0.375;AN=56;BaseQRankSum=13.268;DP=607;FS=9.096;HRun=0;HaplotypeScore=278.1761;InbreedingCoeff=-0.4084;MQ=49.60;MQ0=9;MQRankSum=-11.332;QD=6.22;ReadPosRankSum=7.342;VQSLOD=1.4795;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:75.22:0,75,1297	0/1:1,3:4:13.58:22,0,14	0/0:43,0:19:53.80:0,54,791	0/0:40,0:27:71.98:0,72,1000	0/0:24,0:23:58.75:0,59,1026	0/1:5,15:20:76.69:77,0,138	0/1:7,8:15:5.68:6,0,127	0/1:15,13:28:23.74:417,0,24	0/1:6,15:21:55.02:169,0,55	0/0:21,0:21:59.21:0,59,923	0/0:15,0:13:30.06:0,30,542	0/1:10,22:32:99:177,0,209	0/1:10,12:22:99:113,0,106	0/1:6,17:22:38.64:39,0,72	0/1:9,15:23:83.98:195,0,84	0/1:4,17:21:68.35:137,0,68	1/1:7,11:18:8.46:87,8,0	0/1:4,2:6:7.01:49,0,7	0/1:16,6:22:87.27:87,0,116	0/1:7,18:25:15.26:211,0,15	0/1:4,6:10:20.18:24,0,20	0/1:6,12:18:50.45:50,0,81	0/0:12,0:12:36.12:0,36,625	0/0:23,0:22:60.19:0,60,1053	0/1:8,28:37:63.41:233,0,63	0/1:9,13:22:99:252,0,109	0/1:9,15:22:41.68:177,0,42	0/1:0,9:9:7.59:136,0,8
chr10	68865663	.	GCA	G	1496.34	PASS	AB=0.645;AC=19;AF=0.339;AN=56;BaseQRankSum=11.992;DP=593;FS=5.667;HRun=0;HaplotypeScore=260.1540;InbreedingCoeff=-0.4029;MQ=56.15;MQ0=7;MQRankSum=-10.146;QD=4.23;ReadPosRankSum=5.542;VQSLOD=1.8888;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:60.20:0,60,990	0/1:3,3:6:27.39:27,0,39	0/0:39,0:20:56.76:0,57,812	0/0:40,0:29:72.49:0,72,1058	0/0:21,2:22:18.26:0,18,849	0/1:8,12:21:76.96:77,0,177	0/0:12,7:19:6.87:0,7,187	0/1:18,9:27:96.88:159,0,97	0/1:7,13:20:95.22:109,0,95	0/0:19,0:19:48.16:0,48,771	0/0:15,0:13:27.09:0,27,459	0/1:10,21:31:99:112,0,289	0/1:11,8:19:66.61:67,0,139	0/1:5,16:20:8.75:9,0,123	0/1:9,15:23:99:128,0,132	0/1:13,12:25:75.86:76,0,116	1/1:13,5:18:3.42:60,3,0	0/1:4,2:6:28.87:33,0,29	0/0:21,2:23:4.36:0,4,210	0/1:8,15:23:41.49:148,0,41	0/1:7,3:10:16.61:17,0,26	0/1:6,11:17:28.86:29,0,113	0/0:12,0:12:24.08:0,24,397	0/0:23,0:22:51.17:0,51,832	0/1:7,24:31:99:158,0,105	0/1:14,11:25:99:230,0,149	0/1:8,13:20:66.08:121,0,66	0/1:2,7:9:21.28:97,0,21
chr10	68866069	.	A	AC	17372.55	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-16.332;DP=713;FS=1.721;HRun=3;HaplotypeScore=59.1009;InbreedingCoeff=0.9947;MQ=87.75;MQ0=0;MQRankSum=-3.861;QD=35.31;ReadPosRankSum=4.134;VQSLOD=5.3898;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:78.21:0,78,911	1/1:1,4:5:12.04:167,12,0	0/0:23,0:23:55.82:0,56,646	0/0:27,0:27:75.11:0,75,831	0/0:38,0:38:99:0,111,1319	1/1:1,37:38:90.30:1251,90,0	1/1:3,22:25:54.18:751,54,0	1/1:2,35:37:99:1461,105,0	1/1:0,24:24:69.23:959,69,0	0/0:43,0:43:99:0,126,1478	0/0:25,0:25:75.21:0,75,878	1/1:0,26:26:66.22:918,66,0	1/1:1,26:27:66.22:917,66,0	1/1:0,26:26:75.25:1043,75,0	1/1:0,24:24:69.23:960,69,0	1/1:1,25:26:66.22:919,66,0	1/1:2,15:17:42.14:584,42,0	1/1:0,16:16:36.05:474,36,0	1/1:3,19:22:57.19:789,57,0	1/1:3,24:27:63.20:861,63,0	1/1:2,22:24:54.17:736,54,0	1/1:2,26:28:72.16:976,72,0	0/0:21,0:21:60.18:0,60,719	0/0:18,0:18:51.11:0,51,594	1/1:3,27:30:69.23:960,69,0	1/1:0,37:37:99:1519,111,0	1/1:1,21:22:54.18:751,54,0	1/1:0,11:11:27.09:375,27,0
chr10	68867543	.	A	AT	489.18	PASS	AB=0.964;AC=6;AF=0.107;AN=56;BaseQRankSum=-2.926;DP=404;FS=7.027;HRun=9;HaplotypeScore=83.4411;InbreedingCoeff=0.6613;MQ=74.75;MQ0=0;MQRankSum=-2.115;QD=9.41;ReadPosRankSum=-0.784;VQSLOD=1.9881;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:34,1:35:59.83:0,60,746	0/0:8,0:8:17.99:0,18,156	0/0:16,0:13:17.35:0,17,186	0/1:14,0:13:9.49:9,0,106	0/0:19,0:19:50.98:0,51,443	0/0:17,0:17:50.99:0,51,443	0/0:20,0:20:44.98:0,45,391	1/1:7,11:18:39.07:419,39,0	0/0:12,0:12:26.99:0,27,234	0/0:12,0:12:29.98:0,30,260	0/0:11,0:11:26.99:0,27,234	0/0:11,0:11:17.97:0,18,156	0/0:6,0:6:18:0,18,156	0/0:10,0:10:20.99:0,21,182	0/0:12,0:12:23.99:0,24,208	0/0:9,0:9:23.99:0,24,208	0/0:19,0:20:50.03:0,50,422	1/1:2,5:7:18.01:185,18,0	0/0:19,0:19:55.80:0,56,471	0/0:18,0:19:52.35:0,52,415	0/0:13,0:13:32.98:0,33,286	0/0:14,0:14:35.99:0,36,312	0/0:9,0:9:20.98:0,21,182	0/0:11,0:11:29.95:0,30,251	0/0:15,1:15:5.85:0,6,279	0/0:24,0:24:64.35:0,64,531	0/1:12,1:13:0.18:0,0,227	0/0:9,0:9:21:0,21,182
chr10	68867574	.	G	GTTTC	21574.11	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=1.812;DP=475;FS=5.412;HRun=0;HaplotypeScore=85.8194;InbreedingCoeff=0.9957;MQ=63.91;MQ0=0;MQRankSum=-8.820;QD=67.63;ReadPosRankSum=-0.211;VQSLOD=6.9592;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,117,2130	1/1:2,8:10:27.09:662,27,0	0/0:21,0:17:41.24:0,41,768	0/0:24,0:24:63.06:0,63,1048	0/0:25,0:25:63.22:0,63,1179	1/1:4,21:25:69.24:1829,69,0	1/1:1,16:17:45.15:1169,45,0	1/1:11,16:28:78.22:1837,78,0	1/1:0,12:12:30.10:809,30,0	0/0:12,0:12:33.11:0,33,615	0/0:11,0:11:33.11:0,33,618	1/1:3,12:16:39.60:1008,40,0	1/1:1,11:13:36.12:965,36,0	1/1:0,7:7:18.06:486,18,0	1/1:0,13:14:36.12:971,36,0	1/1:2,9:11:33.11:805,33,0	1/1:2,22:25:60.68:1576,61,0	1/1:4,5:9:21.07:503,21,0	1/1:6,14:20:54.19:1417,54,0	1/1:1,21:23:63.15:1529,63,0	1/1:1,15:16:45.15:1171,45,0	1/1:1,11:12:33.11:866,33,0	0/0:8,0:8:24.08:0,24,456	0/0:13,0:13:39.13:0,39,741	1/1:4,13:17:48.16:1119,48,0	1/1:2,20:22:60.21:1522,60,0	1/1:2,10:13:33.11:845,33,0	1/1:0,8:9:18.06:486,18,0
chr10	68868302	.	T	TG	24172.72	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=10.057;DP=822;FS=0.923;HRun=1;HaplotypeScore=112.0076;InbreedingCoeff=0.9909;MQ=87.17;MQ0=0;MQRankSum=-6.049;QD=40.22;ReadPosRankSum=5.098;VQSLOD=4.5190;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,114,1479	1/1:0,15:15:42.14:629,42,0	0/0:27,0:27:81.19:0,81,1006	0/0:27,0:27:81.21:0,81,1005	0/0:20,0:20:60.19:0,60,766	1/1:0,24:24:60.20:899,60,0	1/1:0,30:30:78.26:1164,78,0	1/1:3,36:39:99:1535,105,0	1/1:0,31:31:78.26:1169,78,0	0/0:31,0:31:87.28:0,87,1122	0/0:23,0:23:69.20:0,69,870	1/1:3,43:46:99:1736,117,0	1/1:0,31:31:90.30:1349,90,0	1/1:1,34:35:93.32:1393,93,0	1/1:1,36:36:99:1573,105,0	1/1:0,40:39:99:1753,117,0	1/1:2,44:46:99:1663,111,0	1/1:0,13:13:39.13:584,39,0	1/1:0,34:34:99:1520,102,0	1/1:1,26:27:72.24:1079,72,0	1/1:0,48:48:99:1977,132,0	1/1:2,13:15:36.12:538,36,0	0/0:28,0:28:77.61:0,78,981	0/0:27,0:27:75.23:0,75,958	1/1:0,16:16:48.16:719,48,0	1/1:3,26:29:9.36:1102,9,0	1/1:3,23:25:63.21:936,63,0	1/1:0,19:19:57.19:854,57,0
chr10	68868673	.	GC	G	143.12	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.024;DP=589;FS=6.203;HRun=2;HaplotypeScore=58.2081;InbreedingCoeff=0.9912;MQ=84.09;MQ0=0;MQRankSum=-2.012;QD=20.45;ReadPosRankSum=1.488;VQSLOD=3.3930;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:63.17:0,63,912	0/0:15,0:15:42.13:0,42,611	0/0:24,0:24:66.17:0,66,893	0/0:15,0:15:42.14:0,42,615	0/0:25,0:25:75.24:0,75,1104	0/0:16,0:16:48.16:0,48,719	0/0:13,0:13:39.12:0,39,564	0/0:35,0:35:99:0,99,1484	0/0:22,0:22:66.21:0,66,958	0/0:42,0:42:99:0,123,1791	0/0:27,0:27:78.26:0,78,1169	0/0:19,0:19:57.18:0,57,836	0/0:27,0:27:81.24:0,81,1169	0/0:26,0:26:78.26:0,78,1162	0/0:24,0:24:72.24:0,72,1079	0/0:20,0:20:57.18:0,57,835	0/0:21,0:21:57.13:0,57,835	1/1:0,7:7:18.06:234,18,0	0/0:10,0:10:30.10:0,30,442	0/0:30,0:30:90.25:0,90,1285	0/0:15,0:15:45.15:0,45,674	0/0:15,0:15:45.15:0,45,674	0/0:19,0:19:57.19:0,57,854	0/0:14,0:14:42.14:0,42,629	0/0:21,0:21:63.20:0,63,923	0/0:22,0:22:66.22:0,66,989	0/0:28,0:28:84.26:0,84,1217	0/0:16,0:16:48.16:0,48,719
chr10	68870032	.	GA	G	5821.10	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=14.968;DP=684;FS=30.079;HRun=1;HaplotypeScore=123.3748;InbreedingCoeff=0.9867;MQ=69.75;MQ0=0;MQRankSum=-4.417;QD=12.46;ReadPosRankSum=4.987;VQSLOD=1.9939;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,114,1798	1/1:6,1:7:17.46:121,17,0	0/0:19,0:20:52.98:0,53,757	0/0:17,0:17:50.31:0,50,690	0/0:28,0:28:56.14:0,56,815	1/1:25,1:25:63.86:383,64,0	1/1:21,0:21:53.68:262,54,0	1/1:27,1:28:9.84:218,10,0	1/1:27,0:27:71.75:381,72,0	0/0:29,0:29:56.77:0,57,852	0/0:14,0:14:21.07:0,21,334	1/1:37,0:37:72.30:465,72,0	1/1:34,0:33:83.75:473,84,0	1/1:24,0:24:16.53:284,17,0	1/1:32,0:32:55.16:373,55,0	1/1:24,0:24:43.03:292,43,0	1/1:34,0:34:94.03:471,94,0	1/1:12,0:12:31.24:155,31,0	1/1:15,2:17:42.16:223,42,0	1/1:19,0:19:36.98:185,37,0	1/1:24,0:24:37.50:264,37,0	1/1:30,0:29:69.42:402,69,0	0/0:22,0:22:45.11:0,45,719	0/0:36,0:36:99:0,105,1573	1/1:16,0:16:31.21:158,31,0	1/1:17,0:17:43.90:221,44,0	1/1:31,0:29:52.73:374,53,0	1/1:7,0:7:20.31:116,20,0
chr10	68870033	.	AC	A	15559.13	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=12.560;DP=694;FS=0.988;HRun=2;HaplotypeScore=81.8836;InbreedingCoeff=0.9943;MQ=69.42;MQ0=0;MQRankSum=-3.299;QD=32.69;ReadPosRankSum=7.151;VQSLOD=4.1761;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,150,2014	1/1:1,6:7:18.06:227,18,0	0/0:20,0:20:40.34:0,40,734	0/0:15,0:15:41.81:0,42,565	0/0:28,0:28:71.62:0,72,925	1/1:2,25:26:66.21:854,66,0	1/1:0,21:21:57.19:740,57,0	1/1:3,25:28:69.21:882,69,0	1/1:0,27:27:75.24:974,75,0	0/0:29,0:29:84.22:0,84,1094	0/0:16,0:16:45.08:0,45,527	1/1:1,36:37:99:1285,99,0	1/1:0,34:33:87.28:1129,87,0	1/1:2,22:24:63.20:818,63,0	1/1:0,31:31:81.26:1052,81,0	1/1:0,23:23:69.22:896,69,0	1/1:0,34:34:99:1282,99,0	1/1:0,12:12:33.11:429,33,0	1/1:7,11:18:15.78:442,16,0	1/1:4,18:22:18.15:482,18,0	1/1:0,23:23:63.20:818,63,0	1/1:3,30:32:72.23:934,72,0	0/0:23,0:23:66.12:0,66,850	0/0:35,0:35:93.32:0,93,1394	1/1:2,16:18:33.11:428,33,0	1/1:2,17:19:48.07:602,48,0	1/1:1,30:30:78.25:1013,78,0	1/1:0,7:7:21.07:273,21,0
chr10	68870232	.	GGT	G	79.15	PASS	AB=0.928;AC=7;AF=0.135;AN=52;BaseQRankSum=2.404;DP=591;FS=0.000;HRun=0;HaplotypeScore=115.1439;InbreedingCoeff=0.0393;MQ=67.34;MQ0=11;MQRankSum=1.069;QD=0.57;ReadPosRankSum=1.937;VQSLOD=1.7011;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:31,2:32:34.10:34,0,384	0/0:8,0:8:3:0,3,26	./.	0/0:26,0:16:5.91:0,6,56	0/1:23,2:25:14.42:14,0,362	0/0:15,0:15:5.46:0,5,49	0/0:30,0:30:5.94:0,6,51	0/0:35,0:34:27.22:0,27,204	0/0:16,0:16:6:0,6,52	0/1:24,1:27:68.37:68,0,423	0/0:6,0:6:11.95:0,12,152	0/1:18,0:18:0:0,0,0	0/0:21,0:21:10.51:0,11,99	./.	0/0:23,0:22:3:0,3,26	0/0:19,0:18:3:0,3,26	0/0:26,0:26:12.22:0,12,107	1/1:9,0:16:8.52:42,9,0	0/0:13,0:13:8.06:0,8,36	0/0:24,0:24:5.90:0,6,44	0/0:19,0:18:8.50:0,9,82	0/0:21,0:20:4.55:0,5,28	0/1:17,4:21:36.82:37,0,302	0/0:30,1:31:3.24:0,3,516	0/0:19,0:19:10.02:0,10,69	0/0:23,0:23:12.76:0,13,133	0/0:24,0:24:14.74:0,15,121	0/0:6,0:5:3:0,3,26
chr10	68870259	.	G	GTGTGTGTGTGTGTGTC	6248.91	PASS	AB=1.000;AC=36;AF=0.667;AN=54;BaseQRankSum=4.592;DP=675;FS=9.085;HRun=0;HaplotypeScore=219.1512;InbreedingCoeff=0.6546;MQ=50.11;MQ0=15;MQRankSum=-3.467;QD=14.33;ReadPosRankSum=-3.639;VQSLOD=2.1352;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:35:28.48:0,28,1276	1/1:10,0:10:3.01:220,3,0	0/0:24,0:12:17.19:0,17,204	0/0:32,0:15:3.03:0,3,214	0/0:29,0:29:52.55:0,53,1389	1/1:26,0:26:8.98:269,9,0	1/1:27,0:27:25:265,25,0	1/1:42,0:42:99:960,100,0	1/1:19,0:19:5.80:340,6,0	0/0:28,0:28:70.89:0,71,1430	0/0:8,0:8:23.60:0,24,393	1/1:24,0:24:0.47:1,0,0	1/1:24,0:24:21.46:377,21,0	./.	1/1:23,0:22:3.48:162,3,0	1/1:22,0:21:3.01:215,3,0	1/1:25,0:25:11.59:413,12,0	0/1:16,0:16:67.92:68,0,313	1/1:23,0:19:53.28:487,53,0	1/1:29,0:29:30.71:304,31,0	1/1:22,0:20:15.47:171,15,0	1/1:31,0:30:2.64:19,3,0	0/0:26,0:26:53.97:0,54,1027	0/0:34,0:34:66.87:0,67,1364	1/1:22,0:22:14.66:245,15,0	0/1:18,0:18:2.92:932,0,3	1/1:25,0:25:12.93:569,13,0	1/1:8,0:7:5.97:234,6,0
chr10	68870262	.	T	TGTGTGTGTGTGTCTGC	8769.45	PASS	AB=0.690;AC=34;AF=0.630;AN=54;BaseQRankSum=-0.138;DP=693;FS=10.740;HRun=0;HaplotypeScore=216.5415;InbreedingCoeff=0.5984;MQ=52.10;MQ0=15;MQRankSum=-3.911;QD=18.86;ReadPosRankSum=-4.313;VQSLOD=1.8931;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:34:28.67:0,29,1535	1/1:0,7:9:3.01:233,3,0	0/0:21,0:10:24.01:0,24,416	0/0:33,0:17:9.26:0,9,555	0/0:28,0:28:55.91:0,56,1626	1/1:7,18:28:11.95:308,12,0	1/1:26,0:26:24.91:465,25,0	1/1:44,0:44:99:1871,109,0	1/1:1,15:19:5.80:365,6,0	0/0:26,0:26:74.27:0,74,1873	0/0:9,0:9:26.66:0,27,542	0/1:3,16:27:0:0,0,0	1/1:8,0:24:22.75:420,23,0	./.	1/1:9,0:25:3.48:174,3,0	1/1:2,16:26:3.01:233,3,0	0/1:14,0:24:7.39:569,0,7	0/1:15,0:15:99:168,0,350	1/1:23,0:19:60.01:803,60,0	1/1:29,0:29:39.05:543,39,0	1/1:9,0:21:15:191,15,0	1/1:9,0:36:2.64:19,3,0	0/0:25,0:25:54.17:0,54,1298	0/0:32,0:32:67.05:0,67,1635	1/1:11,0:25:14.66:258,15,0	0/1:2,12:21:18.04:1282,0,18	1/1:13,1:29:12.93:614,13,0	1/1:2,4:8:5.97:252,6,0
chr10	68870919	.	AATGACCAGAG	A	842.68	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.031;DP=772;FS=10.660;HRun=0;HaplotypeScore=224.6471;InbreedingCoeff=0.9881;MQ=95.22;MQ0=0;MQRankSum=-5.129;QD=93.63;ReadPosRankSum=1.389;VQSLOD=2.2224;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,157,8083	0/0:6,0:6:18.06:0,18,875	0/0:36,0:36:99:0,105,4749	0/0:36,0:36:99:0,102,4713	0/0:8,0:8:24.08:0,24,1189	0/0:20,0:20:60.21:0,60,3177	0/0:38,0:38:99:0,114,5867	0/0:32,0:32:96.32:0,96,4727	0/0:29,0:29:87.26:0,87,4380	0/0:22,0:22:63.22:0,63,3102	0/0:11,0:11:33.08:0,33,1667	0/0:43,0:43:99:0,126,6360	0/0:43,0:43:99:0,127,6603	0/0:44,0:44:99:0,132,6708	0/0:50,0:50:99:0,151,7899	0/0:45,0:45:99:0,129,6587	0/0:29,0:29:84.29:0,84,4491	1/1:0,9:9:27.09:937,27,0	0/0:21,0:21:63.22:0,63,3211	0/0:16,0:16:48.15:0,48,2464	0/0:46,0:46:99:0,138,7281	0/0:15,0:15:42.14:0,42,2245	0/0:14,0:14:36.12:0,36,1935	0/0:28,0:28:81.28:0,81,4238	0/0:10,0:10:30.08:0,30,1376	0/0:25,0:25:75.25:0,75,3653	0/0:30,0:30:87.29:0,87,4292	0/0:13,0:13:39.13:0,39,1928
chr10	68871109	.	A	AC	384.96	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.478;DP=413;FS=3.787;HRun=0;HaplotypeScore=47.5674;InbreedingCoeff=0.8280;MQ=60.77;MQ0=1;MQRankSum=-1.759;QD=38.50;ReadPosRankSum=2.784;VQSLOD=3.8675;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:60.19:0,60,822	0/0:10,0:10:30.10:0,30,419	0/0:22,0:21:60.08:0,60,751	0/0:20,0:19:54.16:0,54,713	0/0:7,0:7:21.06:0,21,277	0/0:8,0:8:24.08:0,24,336	0/0:22,0:22:66.22:0,66,923	0/0:11,0:11:33.09:0,33,431	0/0:15,0:15:45.15:0,45,629	0/0:12,0:12:36.12:0,36,503	0/0:5,0:5:15.05:0,15,210	0/0:10,0:10:30.10:0,30,419	0/0:16,0:16:48.16:0,48,671	0/0:21,0:21:63.21:0,63,880	0/0:18,0:18:54.18:0,54,755	0/0:22,0:22:66.22:0,66,923	0/0:20,0:20:57.19:0,57,795	1/1:0,10:10:30.10:479,30,0	0/0:11,0:11:33.11:0,33,461	0/0:9,0:9:24.08:0,24,336	0/0:39,0:39:99:0,102,1426	0/0:16,0:16:48.16:0,48,671	0/0:12,0:12:33.08:0,33,427	0/0:28,0:28:78.26:0,78,1088	0/0:7,0:7:21.07:0,21,294	0/0:12,0:12:36.12:0,36,504	0/0:9,0:9:27.09:0,27,378	0/0:1,0:1:3.01:0,3,42
chr10	68871489	.	GA	G	147.36	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.201;DP=411;FS=5.901;HRun=2;HaplotypeScore=92.5839;InbreedingCoeff=0.8338;MQ=77.15;MQ0=0;MQRankSum=-3.596;QD=14.74;ReadPosRankSum=-0.772;VQSLOD=2.9073;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,105,1589	0/0:3,0:3:8.98:0,9,75	0/0:15,0:15:38.89:0,39,500	0/0:19,0:19:47.82:0,48,568	0/0:18,0:18:48.11:0,48,709	0/0:15,0:14:36.55:0,37,271	0/0:16,0:16:44.79:0,45,344	0/0:21,0:21:63.20:0,63,955	0/0:13,0:13:33.78:0,34,255	0/0:18,0:18:54.17:0,54,828	0/0:19,0:19:57.19:0,57,903	0/0:12,0:12:33.78:0,34,266	0/0:14,0:14:40.69:0,41,293	0/0:13,0:12:30.70:0,31,233	0/0:10,0:10:24.35:0,24,180	0/0:16,0:16:47.81:0,48,377	0/0:28,0:28:83.56:0,84,635	1/1:0,10:10:24.05:241,24,0	0/0:6,0:6:14.63:0,15,98	0/0:7,0:7:20.93:0,21,166	0/0:9,0:9:26.91:0,27,214	0/0:13,0:13:38.84:0,39,318	0/0:9,0:9:27.09:0,27,427	0/0:27,0:27:81.22:0,81,1211	0/0:7,0:7:20.87:0,21,156	0/0:20,0:20:48.09:0,48,435	0/0:15,0:15:44.83:0,45,352	0/0:2,0:2:5.98:0,6,46
chr10	68871745	.	CCTA	C	18059.95	PASS	AB=0.525;AC=39;AF=0.696;AN=56;BaseQRankSum=18.374;DP=644;FS=3.574;HRun=0;HaplotypeScore=148.8047;InbreedingCoeff=0.9011;MQ=83.77;MQ0=0;MQRankSum=-8.516;QD=42.90;ReadPosRankSum=2.598;VQSLOD=6.5088;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,151,3456	1/1:0,3:3:9.03:154,9,0	0/0:22,0:22:63.20:0,63,1275	0/0:23,0:23:60.10:0,60,1220	0/0:30,0:30:87.28:0,87,1942	1/1:0,12:12:33.11:533,33,0	1/1:0,34:34:90.31:1502,90,0	1/1:1,21:22:63.15:987,63,0	1/1:0,24:24:57.19:958,57,0	0/0:29,0:29:87.28:0,87,1901	0/0:29,0:29:84.26:0,84,1824	1/1:0,23:23:63.21:1046,63,0	1/1:0,19:19:48.16:791,48,0	1/1:1,27:28:72.25:1212,72,0	1/1:1,33:34:87.25:1452,87,0	1/1:0,27:27:78.27:1316,78,0	1/1:0,42:42:99:1827,111,0	1/1:0,16:16:42.04:716,42,0	1/1:2,17:19:48.11:759,48,0	1/1:1,13:14:33.03:498,33,0	1/1:0,27:27:59.44:1008,59,0	1/1:0,14:14:33.11:561,33,0	0/0:10,0:10:24.06:0,24,508	0/0:29,0:29:87.26:0,87,1896	1/1:0,10:10:27.09:447,27,0	0/1:2,19:21:75.23:876,0,75	1/1:0,27:27:72.25:1224,72,0	1/1:1,4:5:12.04:192,12,0
chr10	68872508	.	A	ACTCCTT	34345.68	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=14.274;DP=660;FS=25.083;HRun=0;HaplotypeScore=175.2673;InbreedingCoeff=0.9991;MQ=86.72;MQ0=0;MQRankSum=-18.146;QD=79.32;ReadPosRankSum=-1.258;VQSLOD=3.1456;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,150,3249	1/1:0,12:12:36.12:1251,36,0	0/0:36,0:35:81.18:0,81,1734	0/0:25,0:25:59.93:0,60,1159	0/0:25,0:25:69.24:0,69,1526	1/1:9,17:26:69.19:2163,69,0	1/1:9,10:19:54.17:1613,54,0	1/1:12,10:22:54.17:1768,54,0	1/1:9,15:24:63.18:1936,63,0	0/0:34,0:34:90.31:0,90,2050	0/0:12,0:12:33.11:0,33,708	1/1:10,17:27:81.28:2453,81,0	1/1:14,21:35:87.30:2784,87,0	1/1:11,14:26:66.23:2130,66,0	1/1:12,17:29:81.26:2496,81,0	1/1:14,10:24:60.18:1900,60,0	1/1:11,6:16:33.08:851,33,0	1/1:5,4:9:21.07:648,21,0	1/1:19,3:22:57.13:1554,57,0	1/1:9,22:31:81.23:2502,81,0	1/1:6,10:16:39.13:1242,39,0	1/1:14,13:27:54.06:1496,54,0	0/0:21,0:21:57.20:0,57,1301	0/0:19,0:19:51.17:0,51,1112	1/1:3,9:12:36.02:1001,36,0	1/1:7,15:23:63.22:2134,63,0	1/1:7,8:15:39.12:1266,39,0	1/1:3,12:16:36.12:1156,36,0
chr10	68872558	.	ACTACTT	A	334.90	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-0.362;DP=600;FS=5.980;HRun=0;HaplotypeScore=230.6095;InbreedingCoeff=0.9843;MQ=90.07;MQ0=0;MQRankSum=-1.889;QD=33.49;ReadPosRankSum=0.336;VQSLOD=2.4918;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:56:99:0,148,5047	0/0:8,0:8:21.07:0,21,474	0/0:31,0:31:44.12:0,44,2254	0/0:26,0:26:71.97:0,72,1919	0/0:21,0:21:60.21:0,60,2085	0/0:17,0:17:51.17:0,51,1195	0/0:17,0:17:42.14:0,42,960	0/0:30,0:30:84.27:0,84,2742	0/0:18,0:18:48.16:0,48,1230	0/0:25,0:25:72.25:0,72,2458	0/0:9,0:9:27.09:0,27,962	0/0:19,0:19:54.18:0,54,1275	0/0:25,0:25:72.25:0,72,1698	0/0:24,0:24:69.24:0,69,1675	0/0:28,0:28:75.25:0,75,1681	0/0:24,0:24:72.24:0,72,1685	0/0:12,0:11:30.10:0,30,730	1/1:2,8:10:18.06:425,18,0	0/0:14,0:14:39.13:0,39,1024	0/0:20,0:20:54.18:0,54,1242	0/0:26,0:26:69.17:0,69,1646	0/0:26,0:26:75.26:0,75,1823	0/0:19,0:19:57.20:0,57,1899	0/0:27,0:27:69.24:0,69,2455	0/0:14,0:14:39.13:0,39,1007	0/0:21,0:21:60.21:0,60,1505	0/0:24,0:24:72.25:0,72,1765	0/0:9,0:9:24.08:0,24,561
chr10	68872567	.	AT	A	12510.06	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=14.543;DP=585;FS=0.314;HRun=1;HaplotypeScore=125.8454;InbreedingCoeff=0.9959;MQ=92.17;MQ0=0;MQRankSum=-9.847;QD=37.68;ReadPosRankSum=2.778;VQSLOD=4.5128;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,138,2206	1/1:0,6:6:15.05:210,15,0	0/0:29,0:29:78.26:0,78,1213	0/0:28,0:28:75.23:0,75,1169	0/0:23,0:23:69.22:0,69,1080	1/1:0,17:17:45.15:629,45,0	1/1:0,17:17:42.14:587,42,0	0/0:28,0:28:81.26:0,81,1253	1/1:0,17:17:48.16:670,48,0	0/0:28,0:28:81.28:0,81,1291	0/0:10,0:10:30.09:0,30,454	1/1:0,17:17:48.16:670,48,0	1/1:0,21:21:60.20:835,60,0	1/1:0,24:24:63.21:880,63,0	1/1:0,24:24:63.21:880,63,0	1/1:0,23:23:63.21:880,63,0	1/1:0,14:13:33.11:461,33,0	0/0:12,0:12:23.28:0,23,162	1/1:0,13:13:36.10:485,36,0	1/1:0,20:20:51.17:712,51,0	1/1:0,26:26:72.24:1006,72,0	1/1:0,25:25:66.22:922,66,0	0/0:18,0:18:54.18:0,54,863	0/0:25,0:25:69.24:0,69,1102	1/1:0,15:15:45.15:629,45,0	1/1:0,22:22:63.21:880,63,0	1/1:0,23:23:66.22:922,66,0	1/1:0,8:8:18.06:251,18,0
chr10	68872619	.	GAC	G	201.98	PASS	AB=1.000;AC=6;AF=0.136;AN=44;BaseQRankSum=-0.350;DP=537;FS=9.596;HRun=0;HaplotypeScore=142.2256;InbreedingCoeff=0.2433;MQ=67.34;MQ0=7;MQRankSum=0.275;QD=2.08;ReadPosRankSum=-0.752;VQSLOD=1.9584;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:40,0:40:11.34:11,0,97	./.	./.	./.	0/0:16,0:16:14.62:0,15,150	0/0:18,0:20:15.01:0,15,139	./.	./.	0/0:17,0:17:3:0,3,26	0/0:15,0:15:1.25:0,1,3	1/1:13,0:13:2.90:16,3,0	0/0:15,0:15:5.58:0,6,69	./.	0/0:20,0:20:6.01:0,6,75	0/0:16,0:16:2.98:0,3,22	0/0:17,0:17:6.01:0,6,59	0/0:21,0:20:3.47:0,3,28	1/1:11,8:18:27.03:277,27,0	0/0:9,0:8:2.98:0,3,21	0/0:21,0:21:6:0,6,51	0/0:41,0:41:32.82:0,33,326	0/0:13,0:13:5.99:0,6,50	0/0:9,0:9:2.98:0,3,21	0/1:25,0:25:8.17:8,0,38	0/0:20,0:22:12.01:0,12,111	0/0:21,0:21:19.04:0,19,146	0/0:13,0:17:18.01:0,18,168	0/0:3,0:3:3.90:0,4,39
chr10	68873107	.	C	CCCTGAAAATGGAGTG	88885.07	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=0.059;DP=726;FS=6.914;HRun=0;HaplotypeScore=267.9078;InbreedingCoeff=0.9987;MQ=79.40;MQ0=0;MQRankSum=-18.284;QD=158.44;ReadPosRankSum=1.953;VQSLOD=3.9362;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,111,4558	1/1:7,5:12:36.12:2015,36,0	0/0:25,0:25:75.25:0,75,2731	0/0:30,0:30:81.09:0,81,2582	0/0:28,0:28:81.21:0,81,3133	1/1:17,7:25:69.24:3826,69,0	1/1:14,7:22:63.22:3733,63,0	1/1:30,3:35:93.31:5489,93,0	1/1:17,10:31:78.27:4424,78,0	1/1:13,10:27:81.28:4856,81,0	1/1:10,8:21:54.19:3174,54,0	1/1:18,10:31:81.28:4915,81,0	1/1:5,15:24:57.20:3893,57,0	1/1:17,17:38:99:6941,111,0	1/1:18,14:34:93.32:5792,93,0	1/1:16,9:30:72.25:4508,72,0	1/1:11,9:25:57.20:3573,57,0	1/1:8,0:8:24.08:1090,24,0	1/1:18,5:25:69.22:3502,69,0	1/1:13,15:32:87.26:5489,87,0	1/1:14,3:19:24.08:1188,24,0	1/1:19,11:31:81.28:4757,81,0	0/0:22,0:22:63.19:0,63,2250	0/0:23,0:23:69.22:0,69,2739	1/1:17,12:31:81.28:4778,81,0	1/1:21,6:30:90.25:5387,90,0	1/1:12,7:21:66.23:4006,66,0	1/1:3,5:8:24.08:1549,24,0
chr10	68873759	.	G	GGAAGGCAGAGCGT	42656.09	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-4.193;DP=604;FS=2.109;HRun=0;HaplotypeScore=207.7370;InbreedingCoeff=0.9455;MQ=78.52;MQ0=0;MQRankSum=-15.958;QD=102.29;ReadPosRankSum=-1.109;VQSLOD=4.7910;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,102,3664	1/1:2,6:13:24.08:1299,24,0	0/0:25,0:25:66.14:0,66,1799	0/0:18,0:18:42.14:0,42,1479	0/0:30,0:30:84.29:0,84,3147	1/1:5,13:22:39.13:2390,39,0	1/1:5,5:24:30.10:1516,30,0	1/1:8,2:26:75.22:3659,75,0	1/1:8,14:27:57.20:3526,57,0	0/0:21,0:21:54.18:0,54,2049	0/0:20,0:20:54.16:0,54,1880	1/1:4,14:25:42.14:2540,42,0	1/1:9,15:28:63.22:3872,63,0	1/1:9,6:21:33.07:1675,33,0	1/1:9,10:40:45.15:2655,45,0	1/1:9,9:25:42.14:2652,42,0	1/1:2,4:14:9.03:588,9,0	1/1:1,6:11:21.07:1262,21,0	1/1:2,2:7:15.05:724,15,0	1/1:9,11:29:51.13:2602,51,0	1/1:5,1:10:9.03:455,9,0	1/1:3,4:9:15.05:830,15,0	0/0:11,0:11:21.07:0,21,832	0/0:25,0:25:66.18:0,66,2464	1/1:7,14:26:54.19:3214,54,0	1/1:7,10:24:60.09:2956,60,0	1/1:7,17:31:66.23:4043,66,0	1/1:0,1:4:3.01:196,3,0
chr10	68874047	.	T	TA	9287.98	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-0.964;DP=493;FS=4.866;HRun=8;HaplotypeScore=60.8228;InbreedingCoeff=0.9535;MQ=67.35;MQ0=0;MQRankSum=-1.851;QD=26.77;ReadPosRankSum=0.286;VQSLOD=5.5888;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:87.05:0,87,796	1/1:2,4:6:12.04:138,12,0	0/0:13,0:11:23.97:0,24,212	0/0:13,0:10:14.67:0,15,115	0/0:24,0:24:66.03:0,66,601	1/1:4,14:18:39.12:450,39,0	1/1:2,10:12:24.07:277,24,0	1/1:5,31:36:93.17:991,93,0	1/1:0,15:16:32.89:359,33,0	0/0:17,0:17:42:0,42,380	0/0:23,0:23:63.02:0,63,573	1/1:1,16:17:42.12:485,42,0	1/1:1,22:23:60.18:693,60,0	1/1:1,10:11:21.06:238,21,0	1/1:4,15:19:36.11:416,36,0	1/1:1,14:15:39.12:450,39,0	1/1:5,15:20:36.11:415,36,0	0/0:9,0:9:27.01:0,27,247	1/1:2,20:23:60:664,60,0	1/1:6,24:30:66.08:727,66,0	1/1:0,3:3:9.03:104,9,0	1/1:1,4:5:12.04:138,12,0	0/0:9,0:9:20.95:0,21,183	0/0:9,0:9:4.16:0,4,172	1/1:3,23:26:57.17:658,57,0	1/1:3,20:23:60.15:670,60,0	1/1:2,24:25:72.21:827,72,0	1/1:0,18:18:51.15:589,51,0
chr10	68874322	.	A	AG	17415.59	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-15.125;DP=668;FS=1.450;HRun=3;HaplotypeScore=58.1118;InbreedingCoeff=0.9961;MQ=68.36;MQ0=0;MQRankSum=-3.550;QD=35.76;ReadPosRankSum=2.006;VQSLOD=5.4902;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:84.23:0,84,983	1/1:1,8:9:27.09:375,27,0	0/0:8,0:8:24.05:0,24,259	0/0:14,0:15:34.03:0,34,355	0/0:22,0:22:66.17:0,66,766	1/1:1,21:22:57.19:798,57,0	1/1:2,18:20:36.12:492,36,0	1/1:2,39:41:99:1598,117,0	1/1:0,35:35:87.29:1214,87,0	0/0:37,0:37:99:0,105,1224	0/0:20,0:20:54.16:0,54,646	1/1:3,36:39:99:1385,99,0	1/1:1,23:24:63.21:882,63,0	1/1:2,18:20:48.16:672,48,0	1/1:1,37:38:99:1428,102,0	1/1:4,17:21:42.14:588,42,0	1/1:3,23:26:66.22:924,66,0	1/1:1,6:7:21.07:290,21,0	1/1:2,25:27:72.21:979,72,0	1/1:1,25:26:75.25:1044,75,0	1/1:1,26:27:72.24:1008,72,0	1/1:2,14:16:33.11:462,33,0	0/0:19,0:19:57.17:0,57,683	0/0:31,0:31:87.23:0,87,1019	1/1:1,19:20:51.17:713,51,0	1/1:2,34:36:99:1387,102,0	1/1:1,26:27:69.23:966,69,0	1/1:0,6:6:15.05:210,15,0
chr10	68874339	.	CA	C	81.61	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.558;DP=651;FS=5.977;HRun=1;HaplotypeScore=116.8788;InbreedingCoeff=0.9563;MQ=76.31;MQ0=0;MQRankSum=-0.056;QD=16.32;ReadPosRankSum=-0.849;VQSLOD=3.3903;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:84.29:0,84,1339	0/0:11,0:11:33.11:0,33,524	0/0:13,0:13:23.87:0,24,415	0/0:20,0:19:17.51:0,18,580	0/0:20,0:20:60.19:0,60,936	0/0:19,0:19:57.17:0,57,856	0/0:19,0:19:51.17:0,51,813	0/0:36,0:36:99:0,108,1684	0/0:27,0:27:78.27:0,78,1235	0/0:34,0:34:99:0,102,1591	0/0:19,0:19:57.19:0,57,901	0/0:32,0:32:96.31:0,96,1507	0/0:21,0:21:63.21:0,63,995	0/0:20,0:20:57.18:0,57,880	0/0:44,0:44:99:0,132,2105	0/0:18,0:18:48.16:0,48,767	0/0:27,0:27:78.22:0,78,1197	1/1:0,5:5:12.04:168,12,0	0/0:34,0:34:98.96:0,99,1545	0/0:27,0:27:78.27:0,78,1243	0/0:28,0:28:81.28:0,81,1291	0/0:15,0:15:42.14:0,42,669	0/0:16,0:16:48.16:0,48,755	0/0:27,0:27:81.28:0,81,1294	0/0:20,0:20:57.19:0,57,911	0/0:33,0:33:99:0,99,1580	0/0:28,0:28:81.26:0,81,1270	0/0:10,0:10:27.09:0,27,431
chr10	68874718	.	ATCTC	A	418.37	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.353;DP=727;FS=2.947;HRun=0;HaplotypeScore=113.8107;InbreedingCoeff=0.9974;MQ=80.71;MQ0=1;MQRankSum=-4.563;QD=38.03;ReadPosRankSum=1.407;VQSLOD=3.8941;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,147,3853	0/0:9,0:9:27.09:0,27,717	0/0:18,0:18:45.15:0,45,1143	0/0:22,0:21:48.12:0,48,1161	0/0:23,0:23:60.18:0,60,1498	0/0:31,0:31:81.28:0,81,2140	0/0:19,0:19:54.17:0,54,1392	0/0:39,0:39:99:0,117,2965	0/0:22,0:22:63.22:0,63,1683	0/0:28,0:28:84.29:0,84,2257	0/0:29,0:29:81.28:0,81,2178	0/0:37,0:37:99:0,102,2647	0/0:32,0:32:96.32:0,96,2523	0/0:30,0:30:90.30:0,90,2325	0/0:28,0:28:81.28:0,81,2173	0/0:25,0:25:75.26:0,75,2024	0/0:36,0:35:99:0,99,2589	1/1:1,10:11:27.09:512,27,0	0/0:19,0:19:57.20:0,57,1538	0/0:33,0:33:87.28:0,87,2253	0/0:28,0:28:81.26:0,81,2130	0/0:16,0:16:48.16:0,48,1294	0/0:24,0:24:63.20:0,63,1615	0/0:21,0:21:63.19:0,63,1635	0/0:28,0:28:84.27:0,84,2199	0/0:36,0:36:99:0,99,2633	0/0:23,0:23:69.24:0,69,1858	0/0:10,0:10:30.10:0,30,773
chr10	68874965	.	T	TG	19290.57	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-9.325;DP=687;FS=0.661;HRun=0;HaplotypeScore=72.5339;InbreedingCoeff=0.9977;MQ=76.78;MQ0=0;MQRankSum=-2.766;QD=38.12;ReadPosRankSum=1.126;VQSLOD=5.1009;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:57.12:0,57,695	1/1:0,10:10:21.07:300,21,0	0/0:21,0:21:55.37:0,55,666	0/0:8,0:8:17.66:0,18,169	0/0:27,0:27:81.17:0,81,1058	1/1:1,27:28:81.27:1157,81,0	1/1:0,20:20:57.19:815,57,0	1/1:0,43:43:99:1690,129,0	1/1:1,21:22:57.18:796,57,0	0/0:35,0:35:96.62:0,97,1337	0/0:23,0:23:69.14:0,69,907	1/1:0,25:25:69.23:977,69,0	1/1:1,37:38:99:1457,102,0	1/1:0,23:23:69.23:986,69,0	1/1:1,34:35:87.28:1243,87,0	1/1:0,24:24:60.20:857,60,0	1/1:1,26:27:75.24:1071,75,0	1/1:0,11:11:30.10:428,30,0	1/1:0,17:17:51.15:662,51,0	1/1:0,33:33:93.14:1276,93,0	1/1:0,24:24:60.20:857,60,0	1/1:0,28:28:78.15:1081,78,0	0/0:28,0:28:84.06:0,84,1081	0/0:19,0:19:57.16:0,57,761	1/1:0,23:23:63.21:901,63,0	1/1:1,26:27:40.22:938,40,0	1/1:2,32:34:90.29:1284,90,0	1/1:0,14:14:36.12:514,36,0
chr10	68875192	.	GATTT	G	402.47	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.924;DP=683;FS=4.490;HRun=0;HaplotypeScore=109.2761;InbreedingCoeff=0.9949;MQ=90.98;MQ0=0;MQRankSum=-1.931;QD=40.25;ReadPosRankSum=1.181;VQSLOD=4.0952;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:69.18:0,69,1725	0/0:7,0:7:21.07:0,21,527	0/0:25,0:25:60.21:0,60,1483	0/0:30,0:30:75.49:0,75,1901	0/0:23,0:23:66.23:0,66,1735	0/0:23,0:23:69.24:0,69,1822	0/0:20,0:20:54.17:0,54,1353	0/0:30,0:30:75.25:0,75,1899	0/0:24,0:24:72.25:0,72,1902	0/0:43,0:43:99:0,123,3225	0/0:15,0:15:45.15:0,45,1189	0/0:27,0:27:78.27:0,78,2028	0/0:28,0:28:84.29:0,84,2156	0/0:22,0:22:63.22:0,63,1664	0/0:24,0:24:60.21:0,60,1573	0/0:32,0:32:93.32:0,93,2430	0/0:19,0:19:51.18:0,51,1347	1/1:0,10:10:27.09:497,27,0	0/0:17,0:17:39.13:0,39,1030	0/0:28,0:28:78.27:0,78,2031	0/0:29,0:29:81.26:0,81,2040	0/0:20,0:20:51.17:0,51,1337	0/0:21,0:21:60.21:0,60,1544	0/0:33,0:33:90.31:0,90,2347	0/0:33,0:33:99:0,99,2607	0/0:22,0:22:66.21:0,66,1640	0/0:30,0:29:87.26:0,87,2149	0/0:24,0:24:60.20:0,60,1569
chr10	68876293	.	GT	G	36.17	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.155;DP=704;FS=0.000;HRun=2;HaplotypeScore=70.7365;InbreedingCoeff=0.9670;MQ=91.73;MQ0=0;MQRankSum=-2.455;QD=6.03;ReadPosRankSum=-0.267;VQSLOD=0.3268;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,99,1481	0/0:12,0:12:36.12:0,36,540	0/0:30,0:30:84.23:0,84,1181	0/0:30,0:30:80.85:0,81,1115	0/0:36,0:36:99:0,105,1573	0/0:21,0:21:63.20:0,63,925	0/0:30,0:30:87.29:0,87,1301	0/0:33,0:33:99:0,99,1423	0/0:21,0:21:63.21:0,63,936	0/0:27,0:27:78.25:0,78,1136	0/0:19,0:19:54.18:0,54,809	0/0:26,0:26:78.26:0,78,1164	0/0:29,0:29:84.28:0,84,1259	0/0:25,0:25:72.22:0,72,1051	0/0:29,0:29:84.28:0,84,1259	0/0:20,0:20:60.20:0,60,900	0/0:22,0:22:66.21:0,66,969	1/1:1,5:6:11.87:122,12,0	0/0:16,0:16:48.16:0,48,719	0/0:25,0:25:75.25:0,75,1100	0/0:39,0:39:99:0,117,1731	0/0:24,0:24:72.24:0,72,1077	0/0:26,0:26:78.26:0,78,1169	0/0:11,0:11:33.11:0,33,493	0/0:19,0:19:54.18:0,54,803	0/0:39,0:39:99:0,114,1675	0/0:29,0:27:87.28:0,87,1282	0/0:26,0:26:78.26:0,78,1169
chr10	68876577	.	CTCT	C	620.55	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.000;DP=640;FS=7.544;HRun=0;HaplotypeScore=92.9313;InbreedingCoeff=0.9989;MQ=80.83;MQ0=0;MQRankSum=-2.333;QD=36.50;ReadPosRankSum=2.817;VQSLOD=3.9349;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:90.23:0,90,1871	0/0:9,0:9:27.06:0,27,515	0/0:24,0:24:65.83:0,66,1208	0/0:28,0:28:75:0,75,1324	0/0:18,0:17:54.15:0,54,1095	0/0:21,0:21:63.21:0,63,1370	0/0:27,0:27:78.25:0,78,1717	0/0:29,0:29:87.24:0,87,1588	0/0:20,0:20:60.17:0,60,1274	0/0:28,0:28:81.27:0,81,1777	0/0:16,0:16:45.15:0,45,998	0/0:31,0:31:90.28:0,90,1963	0/0:26,0:26:78.23:0,78,1648	0/0:23,0:23:66.19:0,66,1353	0/0:24,0:24:69.24:0,69,1574	0/0:35,0:35:99:0,102,2113	0/0:21,0:20:60.17:0,60,1223	1/1:0,17:17:42.14:715,42,0	0/0:28,0:28:75.24:0,75,1557	0/0:23,0:23:66.20:0,66,1383	0/0:17,0:17:45.15:0,45,1004	0/0:18,0:18:51.16:0,51,1094	0/0:16,0:16:48.16:0,48,1050	0/0:24,0:24:69.21:0,69,1451	0/0:21,0:21:57.17:0,57,1148	0/0:24,0:24:72.23:0,72,1565	0/0:25,0:25:75.14:0,75,1547	0/0:17,0:17:48.14:0,48,1019
chr10	68876751	.	ATG	A	305.03	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.167;DP=843;FS=1.179;HRun=0;HaplotypeScore=96.7941;InbreedingCoeff=0.9994;MQ=76.19;MQ0=0;MQRankSum=-0.993;QD=23.46;ReadPosRankSum=0.355;VQSLOD=4.3474;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,120,2005	0/0:12,0:12:36.11:0,36,597	0/0:29,0:26:59.99:0,60,975	0/0:26,0:24:54.18:0,54,855	0/0:30,0:30:87.27:0,87,1452	0/0:19,0:18:57.20:0,57,981	0/0:31,0:31:81.28:0,81,1398	0/0:36,0:36:99:0,99,1675	0/0:35,0:35:99:0,99,1714	0/0:33,0:33:90.31:0,90,1556	0/0:21,0:21:63.22:0,63,1074	0/0:41,0:41:99:0,111,1912	0/0:37,0:37:99:0,105,1818	0/0:44,0:44:99:0,126,2166	0/0:31,0:31:81.24:0,81,1329	0/0:30,0:30:81.28:0,81,1397	0/0:30,0:30:81.28:0,81,1403	1/1:2,11:13:30.10:399,30,0	0/0:36,0:36:78.27:0,78,1345	0/0:32,0:32:93.30:0,93,1563	0/0:62,0:62:99:0,166,2804	0/0:21,0:21:51.17:0,51,882	0/0:19,0:19:51.17:0,51,877	0/0:22,0:22:60.16:0,60,1002	0/0:31,0:31:87.30:0,87,1507	0/0:30,0:30:84.28:0,84,1431	0/0:27,0:27:75.26:0,75,1288	0/0:21,0:21:63.22:0,63,1091
chr10	68876914	.	A	AC	1152.27	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=8.572;DP=793;FS=10.731;HRun=1;HaplotypeScore=86.1288;InbreedingCoeff=0.9997;MQ=81.94;MQ0=0;MQRankSum=-4.323;QD=41.15;ReadPosRankSum=2.802;VQSLOD=3.5805;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,114,1574	0/0:13,0:13:36.12:0,36,504	0/0:22,0:22:51.43:0,51,709	0/0:27,0:27:71.96:0,72,887	0/0:23,0:23:69.22:0,69,946	0/0:12,0:12:36.10:0,36,470	0/0:24,0:24:72.21:0,72,970	0/0:33,0:33:93.31:0,93,1297	0/0:34,0:34:99:0,99,1385	0/0:33,0:33:99:0,99,1365	0/0:18,0:18:54.17:0,54,738	0/0:39,0:39:99:0,117,1635	0/0:32,0:32:96.29:0,96,1320	0/0:32,0:32:93.30:0,93,1282	0/0:34,0:34:99:0,102,1422	0/0:27,0:27:78.26:0,78,1091	0/0:43,0:43:99:0,123,1720	1/1:0,28:28:78.27:1247,78,0	0/0:23,0:23:66.22:0,66,921	0/0:28,0:28:81.27:0,81,1131	0/0:37,0:37:99:0,108,1475	0/0:27,0:27:81.24:0,81,1096	0/0:28,0:28:84.24:0,84,1113	0/0:20,0:20:60.20:0,60,837	0/0:28,0:28:84.28:0,84,1169	0/0:41,0:41:99:0,111,1534	0/0:27,0:27:81.25:0,81,1114	0/0:21,0:21:52.62:0,53,829
chr10	68877239	.	G	GTTT	7094.51	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=8.000;DP=745;FS=0.000;HRun=10;HaplotypeScore=133.6396;InbreedingCoeff=0.9935;MQ=71.74;MQ0=7;MQRankSum=-0.923;QD=14.36;ReadPosRankSum=1.937;VQSLOD=2.1669;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:55:99:0,114,1487	1/1:5,1:17:26.92:240,27,0	0/0:36,0:25:50.50:0,51,494	0/0:28,0:21:23.90:0,24,234	0/0:25,0:25:51.07:0,51,603	1/1:3,0:19:35.86:274,36,0	1/1:8,0:22:26.90:207,27,0	0/0:34,0:36:77.85:0,78,848	1/1:3,1:16:25.20:256,25,0	1/1:11,0:32:31.54:110,32,0	1/1:2,0:9:12.19:57,12,0	1/1:6,0:29:58.29:433,58,0	1/1:6,0:35:65.44:497,65,0	1/1:7,1:27:46.07:378,46,0	1/1:5,1:31:58.63:475,59,0	1/1:4,0:20:37.11:277,37,0	1/1:5,1:23:42.99:351,43,0	0/0:1,0:17:41.18:0,41,249	1/1:9,0:25:46.11:370,46,0	1/1:4,1:25:62.76:525,63,0	1/1:9,0:31:56.78:433,57,0	1/1:2,1:13:26.93:244,27,0	0/0:12,0:13:25.40:0,25,251	0/0:36,0:38:99:0,102,1191	1/1:3,0:24:44.83:343,45,0	1/1:6,0:33:78.97:605,79,0	1/1:7,2:39:80.22:676,80,0	1/1:3,1:20:44.83:344,45,0
chr10	68877733	.	C	CCCG	430.84	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.771;DP=832;FS=2.595;HRun=0;HaplotypeScore=118.5680;InbreedingCoeff=0.9967;MQ=86.34;MQ0=1;MQRankSum=-3.061;QD=47.87;ReadPosRankSum=-1.808;VQSLOD=4.9728;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,99,1435	0/0:15,0:15:42.13:0,42,661	0/0:28,0:28:74.67:0,75,1052	0/0:34,0:34:34.54:0,35,1014	0/0:44,0:44:99:0,132,2030	0/0:32,0:32:93.29:0,93,1459	0/0:27,0:27:78.24:0,78,1225	0/0:40,0:40:99:0,114,1680	0/0:26,0:26:75.23:0,75,1155	0/0:37,0:37:99:0,111,1728	0/0:17,0:17:48.16:0,48,781	0/0:36,0:36:99:0,102,1587	0/0:40,0:40:99:0,114,1753	0/0:39,0:39:99:0,114,1755	0/0:40,0:40:99:0,105,1621	0/0:49,0:49:99:0,135,2087	0/0:31,0:31:87.26:0,87,1364	1/1:2,7:9:24.08:524,24,0	0/0:17,0:17:45.10:0,45,639	0/0:36,0:36:99:0,102,1556	0/0:24,0:24:66.20:0,66,1020	0/0:26,0:26:72.23:0,72,1128	0/0:23,0:23:69.22:0,69,1088	0/0:24,0:23:60.15:0,60,920	0/0:23,0:23:66.20:0,66,1026	0/0:33,0:33:96.30:0,96,1491	0/0:39,0:39:99:0,114,1720	0/0:9,0:9:27.05:0,27,390
chr10	68878721	.	TGAGAGAGAGA	T	1793.84	PASS	AB=0.964;AC=23;AF=0.479;AN=48;BaseQRankSum=0.679;DP=498;FS=44.406;HRun=0;HaplotypeScore=169.1253;InbreedingCoeff=0.2241;MQ=39.63;MQ0=36;MQRankSum=1.362;QD=6.64;ReadPosRankSum=-0.360;VQSLOD=1.0328;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:23:3.01:0,3,112	0/0:10,0:9:0.47:0,0,1	./.	./.	0/0:23,0:20:11.85:0,12,224	1/1:20,0:18:3.01:57,3,0	0/0:25,0:23:0.59:0,1,1	0/0:19,0:18:0:0,0,0	1/1:16,0:14:5.12:26,5,0	0/1:24,0:21:99:124,0,244	./.	0/1:14,0:14:0.19:5,0,0	1/1:12,0:12:14.38:139,14,0	0/0:28,0:27:5.26:0,5,180	1/1:22,4:23:13.65:281,14,0	0/1:13,1:14:4.35:134,0,4	0/1:19,0:18:14.23:14,0,39	./.	0/1:13,1:14:10.24:135,0,10	0/1:13,0:15:11.89:42,0,12	0/1:19,0:14:0.09:44,0,0	1/1:23,1:23:5.75:62,6,0	0/0:12,0:12:6:0,6,158	0/0:32,0:30:15.05:0,15,457	0/0:18,1:19:2.85:0,3,39	1/1:16,3:17:0.89:367,1,0	1/1:15,3:18:11.99:245,12,0	1/1:10,3:9:7.52:257,8,0
chr10	68879085	.	GTATAA	G	726.91	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.590;DP=735;FS=0.000;HRun=0;HaplotypeScore=130.6648;InbreedingCoeff=0.9450;MQ=83.43;MQ0=0;MQRankSum=-4.520;QD=38.26;ReadPosRankSum=1.700;VQSLOD=3.5103;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,120,3766	0/0:12,0:12:33.11:0,33,1026	0/0:21,0:21:60.18:0,60,1822	0/0:22,0:22:63.22:0,63,1726	0/0:27,0:27:81.26:0,81,2529	0/0:28,0:28:84.29:0,84,2657	0/0:26,0:26:75.24:0,75,2290	0/0:38,0:38:99:0,111,3464	0/0:28,0:28:84.27:0,84,2587	0/0:35,0:35:99:0,99,3110	0/0:18,0:18:51.17:0,51,1521	0/0:24,0:24:69.22:0,69,2148	0/0:36,0:36:99:0,105,3349	0/0:26,0:26:78.27:0,78,2489	0/0:33,0:33:96.33:0,96,3052	0/0:34,0:34:99:0,99,3168	0/0:31,0:31:90.30:0,90,2778	1/1:2,17:19:39.09:822,39,0	0/0:17,0:17:51.18:0,51,1645	0/0:17,0:17:45.15:0,45,1376	0/0:46,0:46:99:0,135,4215	0/0:28,0:28:81.28:0,81,2582	0/0:30,0:30:87.23:0,87,2709	0/0:17,0:17:51.18:0,51,1602	0/0:16,0:16:48.16:0,48,1543	0/0:34,0:34:99:0,102,3144	0/0:29,0:29:87.28:0,87,2717	0/0:3,0:3:9.03:0,9,291
chr10	68880065	.	G	GA	63.55	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.935;DP=562;FS=1.394;HRun=6;HaplotypeScore=57.4523;InbreedingCoeff=0.9644;MQ=90.37;MQ0=1;MQRankSum=-0.905;QD=10.59;ReadPosRankSum=-3.767;VQSLOD=0.4502;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:65.97:0,66,652	0/0:9,0:9:24.05:0,24,240	0/0:28,0:28:43.90:0,44,609	0/0:17,0:16:33.18:0,33,311	0/0:21,0:21:54.11:0,54,544	0/0:35,0:35:96.14:0,96,966	0/0:15,0:15:45.08:0,45,447	0/0:34,0:34:52.41:0,52,372	0/0:15,0:15:33.02:0,33,316	0/0:24,0:24:66.07:0,66,649	0/0:20,0:20:60.13:0,60,610	0/0:18,0:18:51.11:0,51,515	0/0:21,0:21:60.09:0,60,591	0/0:23,0:23:57.13:0,57,582	0/0:16,0:16:48.11:0,48,490	0/0:23,0:23:66.10:0,66,653	0/0:23,0:22:60.10:0,60,603	1/1:2,4:6:12.04:149,12,0	0/0:10,0:10:30.04:0,30,293	0/0:25,0:25:75.15:0,75,758	0/0:18,0:18:51.12:0,51,520	0/0:23,0:23:60.13:0,60,611	0/0:17,0:17:45.09:0,45,454	0/0:21,0:21:60.12:0,60,606	0/0:22,0:22:48.10:0,48,489	0/0:22,0:22:57.11:0,57,575	0/0:23,0:23:54.08:0,54,535	0/0:9,0:9:27.04:0,27,267
chr10	68880423	.	TA	T	10160.32	PASS	AB=1.000;AC=41;AF=0.732;AN=56;BaseQRankSum=10.035;DP=542;FS=6.844;HRun=8;HaplotypeScore=52.5980;InbreedingCoeff=0.9183;MQ=71.40;MQ0=0;MQRankSum=-1.167;QD=24.78;ReadPosRankSum=3.286;VQSLOD=5.6052;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:36.10:0,36,423	1/1:1,10:11:30.05:290,30,0	0/0:12,0:10:24.03:0,24,270	0/1:6,0:6:7.76:8,0,81	0/0:31,0:31:81.21:0,81,944	1/1:2,19:21:48.08:464,48,0	1/1:1,7:8:21.03:203,21,0	1/1:6,29:35:84.06:796,84,0	1/1:0,19:19:54.09:521,54,0	0/0:28,0:28:78.23:0,78,934	0/0:25,0:25:75.22:0,75,897	1/1:1,14:15:42.07:406,42,0	1/1:2,24:26:66.10:637,66,0	1/1:2,13:15:36.06:348,36,0	1/1:3,25:28:72.11:695,72,0	1/1:2,17:19:42.07:406,42,0	1/1:2,18:20:51.08:492,51,0	1/1:2,16:18:45.02:425,45,0	1/1:2,13:15:39.06:376,39,0	1/1:2,31:33:93.09:887,93,0	1/1:0,10:10:30.05:290,30,0	1/1:2,12:14:36.06:347,36,0	0/0:17,0:17:47.16:0,47,528	0/0:5,0:5:15.05:0,15,181	1/1:1,20:21:57.09:550,57,0	1/1:3,23:26:35.87:630,36,0	1/1:2,36:38:99:1042,108,0	1/1:0,12:12:36.06:348,36,0
chr10	68882761	.	C	CACATG	42959.56	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=-15.611;DP=715;FS=2.786;HRun=0;HaplotypeScore=111.6013;InbreedingCoeff=0.9765;MQ=83.67;MQ0=0;MQRankSum=-8.262;QD=79.70;ReadPosRankSum=2.889;VQSLOD=7.2259;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:90.31:0,90,2096	1/1:1,10:11:33.11:1096,33,0	0/0:26,0:26:75.24:0,75,1655	0/0:24,0:24:63.19:0,63,1329	0/0:41,0:41:99:0,123,2786	1/1:0,32:33:87.30:2893,87,0	1/1:5,15:25:45.15:1481,45,0	1/1:5,25:32:96.33:3101,96,0	1/1:0,20:21:57.20:1897,57,0	1/1:4,25:35:99:3079,102,0	1/1:1,12:16:27.09:899,27,0	1/1:2,27:31:87.30:2896,87,0	1/1:1,28:32:78.27:2594,78,0	1/1:3,25:30:81.28:2694,81,0	1/1:1,25:32:69.24:2283,69,0	1/1:3,21:25:66.23:2196,66,0	1/1:0,13:16:36.12:1199,36,0	1/1:1,3:5:9.03:299,9,0	1/1:1,13:17:42.14:1343,42,0	1/1:7,22:32:60.21:1997,60,0	1/1:3,26:30:60.21:1996,60,0	1/1:3,23:29:63.22:2096,63,0	0/0:33,0:33:93.32:0,93,2167	0/0:21,0:21:63.22:0,63,1468	1/1:3,20:25:48.16:1599,48,0	1/1:1,21:29:87.22:2456,87,0	1/1:3,24:29:78.27:2564,78,0	1/1:0,4:4:9.03:299,9,0
chr10	68883108	.	TACACACAC	T	2894.40	PASS	AB=0.801;AC=31;AF=0.620;AN=50;BaseQRankSum=6.235;DP=532;FS=10.516;HRun=0;HaplotypeScore=132.0249;InbreedingCoeff=0.5931;MQ=67.32;MQ0=19;MQRankSum=-5.466;QD=9.28;ReadPosRankSum=2.239;VQSLOD=1.9631;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:30:30.10:0,30,764	1/1:6,4:10:3.01:75,3,0	./.	./.	0/0:18,0:18:21.07:0,21,784	1/1:16,3:19:8.92:126,9,0	1/1:16,3:19:6.02:127,6,0	0/0:20,0:18:15.03:0,15,285	0/1:7,1:12:70.18:107,0,70	0/0:16,0:16:21.07:0,21,766	0/0:9,0:9:12.04:0,12,485	1/1:10,4:14:3.01:75,3,0	0/1:11,1:12:3.87:143,0,4	1/1:8,4:12:12.04:298,12,0	1/1:9,5:14:15.01:261,15,0	1/1:11,5:18:15.05:335,15,0	1/1:15,10:25:11.84:298,12,0	0/0:20,0:19:25.63:0,26,673	1/1:4,3:5:6.02:123,6,0	1/1:15,9:23:17.60:210,18,0	1/1:19,2:20:1.41:3,1,0	1/1:20,4:25:6.45:95,6,0	0/0:9,0:8:12.04:0,12,343	0/0:28,0:31:33.10:0,33,1164	1/1:15,6:21:6.45:95,6,0	0/1:22,9:30:39.19:263,0,39	1/1:22,6:26:21.06:441,21,0	./.
chr10	68883492	.	G	GGACAATCT	635.42	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-2.432;DP=680;FS=1.518;HRun=0;HaplotypeScore=184.8531;InbreedingCoeff=0.9903;MQ=82.78;MQ0=0;MQRankSum=-4.115;QD=79.43;ReadPosRankSum=0.210;VQSLOD=3.9889;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:96.29:0,96,2674	0/0:9,0:9:27.09:0,27,733	0/0:17,0:17:45.14:0,45,1015	0/0:22,0:22:51.06:0,51,1178	0/0:23,0:23:59.77:0,60,1478	0/0:36,0:36:99:0,108,2988	0/0:23,0:23:69.24:0,69,1967	0/0:44,0:44:99:0,120,3241	0/0:25,0:25:72.24:0,72,1997	0/0:27,0:27:78.26:0,78,2182	0/0:12,0:12:36.10:0,36,886	0/0:21,0:21:63.22:0,63,1799	0/0:34,0:34:99:0,102,2853	0/0:24,0:24:69.24:0,69,1901	0/0:23,0:23:66.23:0,66,1857	0/0:30,0:30:84.29:0,84,2332	0/0:15,0:15:45.15:0,45,1250	1/1:3,4:8:18.06:726,18,0	0/0:24,0:24:69.24:0,69,1831	0/0:39,0:39:99:0,111,3031	0/0:24,0:24:69.22:0,69,1898	0/0:28,0:28:81.28:0,81,2291	0/0:19,0:19:54.19:0,54,1497	0/0:10,0:10:30.10:0,30,861	0/0:21,0:21:60.18:0,60,1547	0/0:30,0:30:90.29:0,90,2358	0/0:40,0:40:99:0,114,3011	0/0:18,0:18:54.19:0,54,1550
chr10	68885186	.	A	ATTTT	591.71	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=0.216;DP=665;FS=10.445;HRun=9;HaplotypeScore=132.0324;InbreedingCoeff=0.9120;MQ=72.65;MQ0=0;MQRankSum=-2.718;QD=31.14;ReadPosRankSum=-0.901;VQSLOD=0.6212;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,99,1424	0/0:9,0:9:24.06:0,24,350	0/0:12,0:12:32.81:0,33,424	0/0:13,0:14:6.65:0,7,250	0/0:23,0:23:63.16:0,63,899	0/0:15,0:15:33.02:0,33,483	0/0:25,0:25:72.06:0,72,981	0/0:32,0:33:67.30:0,67,911	0/0:20,0:20:42.07:0,42,613	0/0:26,0:26:72.20:0,72,1051	0/0:20,0:21:57.14:0,57,814	0/0:32,0:32:90.22:0,90,1286	0/0:20,0:20:42.04:0,42,592	0/0:24,0:24:66.17:0,66,945	0/0:28,0:28:69.04:0,69,934	0/0:23,0:23:63.11:0,63,893	0/0:31,0:31:87.26:0,87,1249	1/1:4,13:19:30.10:686,30,0	0/0:24,0:24:63.18:0,63,912	0/0:22,0:22:59.78:0,60,843	0/0:17,0:17:45.10:0,45,631	0/0:25,0:25:69.23:0,69,1002	0/0:29,0:30:78.16:0,78,1078	0/0:15,0:15:33.06:0,33,481	0/0:33,0:33:96.30:0,96,1387	0/0:35,0:35:96.28:0,96,1403	0/0:29,0:28:81.20:0,81,1140	0/0:19,0:19:39.10:0,39,570
chr10	68885277	.	GGTGTGT	G	5315.88	PASS	AB=0.730;AC=35;AF=0.625;AN=56;BaseQRankSum=8.932;DP=601;FS=0.000;HRun=0;HaplotypeScore=157.5378;InbreedingCoeff=0.5134;MQ=61.00;MQ0=15;MQRankSum=-8.144;QD=13.09;ReadPosRankSum=2.926;VQSLOD=3.9376;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:41.63:0,42,990	1/1:9,4:13:12.04:214,12,0	0/0:29,0:17:0.47:0,0,1	0/0:31,0:22:3.01:0,3,41	0/0:20,0:19:24.08:0,24,656	1/1:12,3:15:9.03:170,9,0	1/1:14,3:17:9.03:168,9,0	1/1:29,3:31:3.63:45,4,0	1/1:17,5:23:12.03:217,12,0	0/0:23,0:22:24.07:0,24,544	0/0:19,0:19:24.05:0,24,440	1/1:18,10:29:27.09:508,27,0	1/1:14,4:19:24.08:412,24,0	1/1:18,4:25:0.02:229,0,0	1/1:20,8:29:12.01:236,12,0	1/1:11,9:22:36.12:646,36,0	0/1:10,9:20:3.15:232,0,3	1/1:12,0:15:15.05:221,15,0	1/1:17,1:17:11.76:162,12,0	0/1:12,6:17:15.41:85,0,15	1/1:25,2:26:12.01:176,12,0	0/1:8,6:14:0.30:318,0,0	0/0:10,0:10:12.04:0,12,287	0/0:26,0:27:51.17:0,51,1415	1/1:6,12:19:30.07:503,30,0	0/1:16,4:22:97.10:262,0,97	1/1:12,6:17:15.05:299,15,0	0/1:6,3:8:21.37:214,0,21
chr10	68885404	.	ACTT	A	1032.19	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.906;DP=750;FS=2.707;HRun=0;HaplotypeScore=112.8064;InbreedingCoeff=0.9981;MQ=86.16;MQ0=0;MQRankSum=-1.662;QD=43.01;ReadPosRankSum=2.823;VQSLOD=5.4680;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,157,3438	0/0:10,0:10:30.10:0,30,647	0/0:31,0:31:73.12:0,73,1540	0/0:31,0:31:66.50:0,66,1581	0/0:23,0:23:66.21:0,66,1428	0/0:25,0:25:75.24:0,75,1633	0/0:27,0:27:78.26:0,78,1700	0/0:31,0:31:87.27:0,87,1762	0/0:24,0:24:72.20:0,72,1561	0/0:19,0:19:54.19:0,54,1195	0/0:18,0:18:54.19:0,54,1206	0/0:39,0:39:99:0,117,2547	0/0:30,0:30:87.28:0,87,1877	0/0:39,0:39:99:0,117,2569	0/0:24,0:24:72.23:0,72,1566	0/0:23,0:23:63.22:0,63,1407	0/0:24,0:24:66.17:0,66,1424	1/1:1,23:24:69.24:1127,69,0	0/0:15,0:15:39.12:0,39,773	0/0:11,0:11:33.11:0,33,737	0/0:48,0:48:99:0,132,2864	0/0:10,0:10:27.09:0,27,603	0/0:16,0:16:45.15:0,45,1005	0/0:53,0:53:99:0,157,3438	0/0:31,0:31:90.31:0,90,2010	0/0:25,0:25:72.24:0,72,1531	0/0:27,0:27:78.27:0,78,1740	0/0:19,0:19:45.15:0,45,993
chr10	68885939	.	C	CTG	1251.24	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.617;DP=646;FS=0.000;HRun=0;HaplotypeScore=115.7203;InbreedingCoeff=0.9043;MQ=82.44;MQ0=1;MQRankSum=-4.263;QD=46.34;ReadPosRankSum=2.037;VQSLOD=4.4331;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,99,1493	0/0:2,0:2:6.02:0,6,92	0/0:26,0:25:66.20:0,66,949	0/0:11,0:11:30.07:0,30,425	0/0:27,0:27:78.25:0,78,1159	0/0:28,0:27:81.22:0,81,1151	0/0:22,0:22:63.17:0,63,898	0/0:30,0:30:81.26:0,81,1195	0/0:20,0:20:60.19:0,60,894	0/0:36,0:36:99:0,105,1608	0/0:14,0:14:39.13:0,39,597	0/0:24,0:24:69.20:0,69,994	0/0:16,0:16:42.14:0,42,643	0/0:30,0:30:87.28:0,87,1310	0/0:28,0:28:84.26:0,84,1241	0/0:26,0:26:78.26:0,78,1174	0/0:20,0:20:57.15:0,57,825	1/1:2,25:27:72.18:1346,72,0	0/0:20,0:20:60.19:0,60,896	0/0:31,0:31:90.28:0,90,1336	0/0:16,0:16:48.13:0,48,692	0/0:13,0:13:39.13:0,39,595	0/0:12,0:12:30.10:0,30,459	0/0:30,0:30:87.30:0,87,1320	0/0:20,0:20:60.19:0,60,897	0/0:33,0:33:96.30:0,96,1425	0/0:38,0:38:99:0,114,1702	0/0:12,0:12:36.12:0,36,551
chr10	68886651	.	AACCT	A	614.38	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.345;DP=558;FS=2.064;HRun=0;HaplotypeScore=96.2118;InbreedingCoeff=0.9795;MQ=93.52;MQ0=0;MQRankSum=-2.324;QD=32.34;ReadPosRankSum=0.294;VQSLOD=3.4333;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:63.22:0,63,1629	0/0:10,0:10:21.07:0,21,548	0/0:24,0:24:63.17:0,63,1447	0/0:35,0:34:29.51:0,30,1451	0/0:24,0:24:72.25:0,72,1884	0/0:18,0:18:54.19:0,54,1400	0/0:14,0:14:36.12:0,36,919	0/0:31,0:31:81.27:0,81,2064	0/0:26,0:26:78.25:0,78,1989	0/0:20,0:20:57.20:0,57,1476	0/0:15,0:15:45.15:0,45,1178	0/0:23,0:23:60.21:0,60,1570	0/0:22,0:22:57.20:0,57,1483	0/0:21,0:21:63.21:0,63,1560	0/0:21,0:21:57.18:0,57,1411	0/0:24,0:23:66.21:0,66,1676	0/0:28,0:28:81.24:0,81,1958	1/1:4,15:19:39.13:709,39,0	0/0:13,0:13:39.13:0,39,966	0/0:20,0:20:60.19:0,60,1517	0/0:13,0:13:36.12:0,36,943	0/0:20,0:20:60.21:0,60,1563	0/0:17,0:17:48.16:0,48,1256	0/0:18,0:18:45.15:0,45,1178	0/0:12,0:12:36.12:0,36,943	0/0:18,0:18:48.16:0,48,1224	0/0:25,0:25:72.25:0,72,1884	0/0:5,0:5:15.05:0,15,393
chr10	68887096	.	CT	C	537.32	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.387;DP=773;FS=0.000;HRun=3;HaplotypeScore=72.4854;InbreedingCoeff=0.9996;MQ=73.84;MQ0=0;MQRankSum=-0.742;QD=29.85;ReadPosRankSum=0.885;VQSLOD=3.0722;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,126,1777	0/0:15,0:15:39.13:0,39,562	0/0:15,0:14:42.14:0,42,593	0/0:22,0:21:63.17:0,63,828	0/0:30,0:30:87.28:0,87,1237	0/0:31,0:31:90.29:0,90,1280	0/0:18,0:18:48.14:0,48,652	0/0:30,0:29:90.30:0,90,1296	0/0:25,0:25:72.24:0,72,1030	0/0:28,0:28:81.18:0,81,1126	0/0:31,0:31:93.31:0,93,1332	0/0:37,0:37:99:0,108,1554	0/0:36,0:36:99:0,99,1404	0/0:40,0:40:99:0,120,1708	0/0:37,0:37:99:0,111,1598	0/0:42,0:42:99:0,120,1672	0/0:28,0:28:78.25:0,78,1104	1/1:0,18:18:51.16:632,51,0	0/0:20,0:20:54.18:0,54,776	0/0:34,0:34:96.31:0,96,1364	0/0:41,0:41:99:0,123,1752	0/0:24,0:24:72.23:0,72,1020	0/0:17,0:17:48.13:0,48,669	0/0:17,0:17:51.17:0,51,735	0/0:21,0:20:60.20:0,60,864	0/0:21,0:21:57.18:0,57,806	0/0:41,0:41:99:0,123,1771	0/0:11,0:11:33.11:0,33,475
chr10	68887686	.	T	TA	2595.42	PASS	AB=0.693;AC=29;AF=0.518;AN=56;BaseQRankSum=-3.677;DP=573;FS=1.043;HRun=15;HaplotypeScore=81.5007;InbreedingCoeff=0.1870;MQ=74.50;MQ0=0;MQRankSum=1.683;QD=6.47;ReadPosRankSum=0.251;VQSLOD=2.7964;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:24:42.62:0,43,243	0/1:3,7:10:14.52:105,0,15	0/0:20,0:16:1.53:0,2,15	0/0:14,0:10:6.67:0,7,29	0/0:31,3:36:23.68:0,24,241	1/1:5,12:18:26.81:216,27,0	0/1:12,4:15:25.79:48,0,26	1/1:21,3:33:39.20:264,39,0	1/1:6,9:16:5.84:40,6,0	0/0:22,0:22:28.29:0,28,166	0/1:17,7:24:65.13:65,0,101	0/1:11,18:29:21.90:168,0,22	0/1:12,7:19:21.27:79,0,21	0/1:2,10:12:18.71:61,0,19	0/1:12,15:29:0.75:172,0,1	1/1:2,20:23:38.53:313,39,0	1/1:1,23:24:17.94:145,18,0	0/0:25,0:25:14.96:0,15,66	1/1:11,10:23:10.46:218,10,0	0/1:10,13:25:11.88:208,0,12	1/1:2,1:3:3:25,3,0	1/1:7,11:19:3.65:118,4,0	0/0:14,0:18:24.49:0,24,136	0/0:12,0:12:7.60:0,8,42	0/1:8,7:16:3.92:96,0,4	1/1:11,16:28:8.67:249,9,0	0/1:9,16:26:0.79:126,0,1	0/1:5,0:5:6.01:58,0,6
chr10	68890566	.	GT	G	1090.53	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=8.767;DP=557;FS=4.950;HRun=10;HaplotypeScore=56.0392;InbreedingCoeff=0.7765;MQ=70.77;MQ0=0;MQRankSum=0.015;QD=14.35;ReadPosRankSum=-2.563;VQSLOD=3.0984;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:81.22:0,81,896	0/0:7,0:8:17.88:0,18,180	0/0:15,0:13:14.76:0,15,217	0/1:16,0:12:12.54:13,0,54	0/0:35,2:37:50.15:0,50,1001	0/0:20,1:21:34.09:0,34,596	0/0:13,0:13:36.08:0,36,388	1/1:9,32:41:95.88:816,96,0	0/0:12,0:12:36.10:0,36,398	0/0:15,0:15:33.09:0,33,364	0/0:31,1:33:73.04:0,73,1006	0/0:23,0:23:63.15:0,63,678	0/0:13,0:13:36.10:0,36,398	0/0:19,0:19:57.13:0,57,614	0/0:8,0:8:24.06:0,24,266	0/0:13,0:13:36.05:0,36,384	0/0:30,1:31:58.09:0,58,829	1/1:1,18:19:44.98:391,45,0	0/0:18,1:19:19.04:0,19,423	0/0:31,0:31:87.22:0,87,954	0/0:14,0:14:27.07:0,27,298	0/0:9,0:9:27.07:0,27,299	0/0:20,0:20:56.37:0,56,604	0/0:16,0:16:45.11:0,45,489	0/0:23,0:23:66.13:0,66,702	0/0:19,0:19:48.13:0,48,531	0/0:28,0:28:78.21:0,78,860	0/0:12,0:12:24.05:0,24,256
chr10	68892257	.	A	ATTTAT	902.12	PASS	AB=1.000;AC=5;AF=0.093;AN=54;BaseQRankSum=3.261;DP=301;FS=3.548;HRun=0;HaplotypeScore=63.0076;InbreedingCoeff=0.1722;MQ=77.51;MQ0=16;MQRankSum=-3.936;QD=9.02;ReadPosRankSum=-0.301;VQSLOD=1.5716;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:23:57.14:0,57,1103	0/0:5,0:5:12.04:0,12,255	0/1:34,0:8:6.89:7,0,62	0/1:44,0:19:29.70:30,0,131	0/0:14,0:14:39.12:0,39,791	0/0:8,0:8:20.66:0,21,445	0/0:3,0:2:6.01:0,6,90	0/0:25,0:25:69.19:0,69,1292	0/0:2,0:2:3.01:0,3,64	0/0:1,0:1:3.01:0,3,41	0/0:4,0:3:6.02:0,6,82	0/1:3,0:3:10.64:11,0,83	0/0:6,0:5:9.03:0,9,180	0/0:7,0:6:15.03:0,15,212	0/0:3,0:3:6.02:0,6,128	0/0:5,0:5:11.97:0,12,161	0/0:31,0:31:93.29:0,93,1811	1/1:9,9:18:32.75:970,33,0	0/0:13,0:12:24.07:0,24,440	0/0:5,0:6:17.97:0,18,282	0/0:3,0:3:6.02:0,6,127	./.	0/0:1,0:1:3.01:0,3,33	0/0:4,0:4:6.02:0,6,105	0/0:8,0:7:18.04:0,18,341	0/0:5,0:5:15.03:0,15,236	0/0:10,0:9:30.08:0,30,517	0/0:10,0:8:15.94:0,16,271
chr10	68897059	.	A	AAC	1375.15	PASS	AB=0.875;AC=34;AF=0.630;AN=54;BaseQRankSum=0.481;DP=396;FS=16.706;HRun=0;HaplotypeScore=76.5903;InbreedingCoeff=0.4916;MQ=76.38;MQ0=5;MQRankSum=1.463;QD=5.78;ReadPosRankSum=-1.196;VQSLOD=1.1484;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:7.41:0,7,194	0/1:4,0:4:0.01:0,0,0	0/0:32,0:17:8.97:0,9,84	0/0:32,0:20:2.09:0,2,48	0/0:18,0:20:38.93:0,39,416	0/1:12,6:17:6.59:119,0,7	1/1:12,0:12:5.97:45,6,0	0/0:15,0:24:3.77:0,4,11	0/0:4,0:4:2.68:0,3,11	1/1:3,8:11:27.07:362,27,0	1/1:10,4:14:3.01:47,3,0	1/1:11,0:11:2.34:23,2,0	1/1:7,4:12:3.01:45,3,0	1/1:16,0:16:2.45:21,2,0	1/1:14,0:14:9.43:80,9,0	1/1:4,1:6:2.48:43,2,0	1/1:26,1:27:8.32:136,8,0	1/1:8,2:18:12.73:129,13,0	./.	1/1:16,0:16:5.44:65,5,0	1/1:12,4:16:3.48:45,3,0	1/1:4,2:6:3.01:44,3,0	0/0:10,0:13:20.89:0,21,221	0/0:11,0:11:17.08:0,17,156	1/1:7,5:12:3.01:44,3,0	1/1:14,2:16:7.03:223,7,0	1/1:8,1:9:5.51:67,6,0	0/0:3,0:3:2.68:0,3,11
chr10	68897085	.	CAT	C	2898.69	PASS	AB=0.994;AC=35;AF=0.625;AN=56;BaseQRankSum=-3.837;DP=483;FS=2.678;HRun=0;HaplotypeScore=69.6378;InbreedingCoeff=-0.0522;MQ=58.92;MQ0=10;MQRankSum=0.031;QD=7.10;ReadPosRankSum=-6.218;VQSLOD=1.2585;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:18,0:18:12.19:12,0,353	1/1:5,0:5:8.99:74,9,0	0/0:39,0:11:22.96:0,23,215	0/1:37,0:13:29.16:29,0,88	0/0:23,0:23:48.55:0,49,726	0/1:15,1:15:2.89:124,0,3	0/1:14,0:14:33.76:157,0,34	0/1:30,0:29:57.30:57,0,385	1/1:6,1:7:17.31:167,17,0	0/1:13,0:12:6.60:7,0,236	0/1:11,0:11:0.73:1,0,162	0/1:10,0:10:3.27:62,0,3	1/1:15,0:15:19.47:162,19,0	0/1:18,0:18:70.19:105,0,70	0/1:17,0:17:30.08:155,0,30	1/1:10,0:10:20.27:169,20,0	0/1:33,1:33:36.18:343,0,36	1/1:22,0:22:7.44:176,7,0	1/1:7,0:7:17.96:154,18,0	0/1:21,0:21:9.84:220,0,10	1/1:19,0:18:8.12:147,8,0	0/1:6,0:5:9.71:19,0,10	0/0:13,0:13:17.75:0,18,346	0/1:11,0:11:1.85:2,0,155	1/1:18,0:18:14.31:128,14,0	0/1:23,0:23:8.48:337,0,8	1/1:17,0:17:2.69:215,3,0	1/1:0,8:8:3.01:45,3,0
chr10	68898525	.	A	AT	585.35	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=-6.068;DP=549;FS=1.902;HRun=6;HaplotypeScore=51.9617;InbreedingCoeff=0.6380;MQ=67.99;MQ0=0;MQRankSum=-0.610;QD=18.29;ReadPosRankSum=1.770;VQSLOD=3.2426;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:72.16:0,72,734	0/0:8,0:8:20.99:0,21,197	0/0:9,0:9:2.53:0,3,40	0/1:9,0:7:2.87:3,0,50	0/0:24,0:24:66.14:0,66,667	0/0:12,0:12:36.08:0,36,367	0/0:8,0:8:24.05:0,24,245	0/0:32,0:32:84.17:0,84,851	0/0:12,0:12:33.04:0,33,322	0/0:20,0:20:48.08:0,48,475	0/0:23,0:23:63.10:0,63,622	0/0:25,0:25:66.10:0,66,661	0/0:23,0:23:66.12:0,66,659	0/0:22,0:22:60.13:0,60,612	0/0:30,0:30:72.15:0,72,728	0/0:28,0:28:75.15:0,75,758	0/0:11,0:11:30.04:0,30,298	1/1:0,23:23:54.17:679,54,0	0/0:18,0:18:33:0,33,337	0/0:25,0:25:63.14:0,63,639	0/0:12,0:12:33.08:0,33,337	0/0:16,0:16:48.11:0,48,490	0/0:26,0:26:75.17:0,75,765	0/0:11,0:11:21.02:0,21,206	0/0:26,0:26:66.14:0,66,673	0/0:26,0:26:69.15:0,69,699	0/0:29,0:29:78.13:0,78,779	0/0:12,0:12:30.07:0,30,306
chr10	68900604	.	C	CA	14876.55	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-18.029;DP=709;FS=2.482;HRun=6;HaplotypeScore=61.7519;InbreedingCoeff=0.9841;MQ=80.07;MQ0=0;MQRankSum=-2.995;QD=32.84;ReadPosRankSum=4.322;VQSLOD=4.9210;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:69.16:0,69,704	1/1:1,11:12:33.11:415,33,0	0/0:26,0:26:60.08:0,60,610	0/0:12,0:12:32.64:0,33,297	0/0:37,0:37:99:0,108,1102	1/1:3,36:39:99:1283,102,0	1/1:5,26:31:78.25:981,78,0	0/0:49,0:49:99:0,120,1224	1/1:0,27:28:81.26:1017,81,0	0/0:29,0:29:84.18:0,84,852	0/0:27,0:28:80.21:0,80,802	1/1:3,16:19:48.15:604,48,0	1/1:0,31:31:84.27:1057,84,0	1/1:1,16:17:45.14:566,45,0	1/1:3,27:30:75.24:944,75,0	1/1:1,18:19:51.16:642,51,0	1/1:2,20:22:54.17:679,54,0	0/0:20,0:20:60.10:0,60,601	1/1:1,16:17:48.14:590,48,0	1/1:0,45:45:99:1576,129,0	1/1:2,11:13:33.11:415,33,0	1/1:2,29:31:81.26:1019,81,0	0/0:21,0:21:60.14:0,60,612	0/0:9,0:9:24.01:0,24,233	1/1:3,24:27:69.22:868,69,0	1/1:3,30:33:35.05:1056,35,0	1/1:5,30:36:87.28:1088,87,0	1/1:0,2:2:6.02:75,6,0
chr10	68901574	.	GA	G	270.49	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.457;DP=515;FS=3.838;HRun=8;HaplotypeScore=46.6378;InbreedingCoeff=0.7946;MQ=81.39;MQ0=0;MQRankSum=-2.373;QD=16.91;ReadPosRankSum=1.647;VQSLOD=3.4437;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:54.17:0,54,651	0/0:9,0:9:24.07:0,24,290	0/0:14,0:14:1.11:0,1,265	0/0:14,0:13:30.05:0,30,327	0/0:26,0:26:66.20:0,66,797	0/0:25,0:25:72.22:0,72,870	0/0:8,0:8:18.06:0,18,217	0/0:32,0:32:93.26:0,93,1102	0/0:15,0:15:42.12:0,42,496	0/0:16,0:16:45.14:0,45,544	0/0:16,0:16:48.15:0,48,580	0/0:17,0:17:39.08:0,39,438	0/0:19,0:19:57.16:0,57,677	0/0:17,0:17:42.13:0,42,507	0/0:27,0:27:81.25:0,81,978	0/0:23,0:22:63.16:0,63,724	0/0:13,0:13:39.12:0,39,471	1/1:1,15:16:39:365,39,0	0/0:24,0:25:72.07:0,72,828	0/0:28,0:28:69.19:0,69,810	0/0:14,0:14:42.07:0,42,468	0/0:6,0:6:15.05:0,15,181	0/0:16,0:16:48.07:0,48,535	0/0:15,0:15:45.14:0,45,544	0/0:22,0:22:66.17:0,66,772	0/0:26,0:26:63.18:0,63,751	0/0:25,0:25:72.22:0,72,870	0/0:11,0:11:33.10:0,33,399
chr10	68901962	.	T	TA	10937.20	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-14.487;DP=532;FS=2.052;HRun=7;HaplotypeScore=43.1421;InbreedingCoeff=0.9934;MQ=71.59;MQ0=0;MQRankSum=-1.704;QD=31.16;ReadPosRankSum=3.377;VQSLOD=4.8695;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:57.09:0,57,550	1/1:0,8:8:24.07:288,24,0	0/0:7,0:7:15.02:0,15,145	0/0:9,0:9:15.01:0,15,142	0/0:28,0:29:80.16:0,80,758	1/1:0,22:22:66.20:797,66,0	1/1:1,9:10:27.08:326,27,0	0/0:33,0:33:84.11:0,84,803	1/1:1,14:15:39.12:471,39,0	0/0:14,0:14:36.06:0,36,348	0/0:19,0:19:54.09:0,54,521	1/1:1,11:12:33.10:399,33,0	1/1:6,25:31:75.23:906,75,0	1/1:6,23:29:66.20:796,66,0	1/1:3,15:18:45.14:544,45,0	1/1:0,16:16:48.15:580,48,0	1/1:3,14:17:42.13:507,42,0	0/0:16,0:16:42.04:0,42,399	1/1:1,16:17:48.15:579,48,0	1/1:4,23:27:66.15:773,66,0	1/1:0,16:16:36.11:434,36,0	1/1:1,6:7:18.06:217,18,0	0/0:19,0:19:54.07:0,54,515	0/0:15,0:15:42.07:0,42,406	1/1:2,17:19:48.15:580,48,0	1/1:4,32:36:96.28:1148,96,0	1/1:5,35:40:99:1196,99,0	1/1:0,11:11:33.10:396,33,0
chr10	68902313	.	GAA	G	4496.62	PASS	AB=0.707;AC=42;AF=0.750;AN=56;BaseQRankSum=5.129;DP=563;FS=1.488;HRun=16;HaplotypeScore=101.2183;InbreedingCoeff=0.7489;MQ=66.43;MQ0=11;MQRankSum=-0.287;QD=10.84;ReadPosRankSum=5.808;VQSLOD=3.8830;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:24:55.85:0,56,573	0/0:1,3:3:0:0,0,0	0/0:43,0:11:14.09:0,14,165	0/0:30,0:16:20.34:0,20,202	0/1:18,2:23:6.41:6,0,358	1/1:6,12:18:25.59:252,26,0	1/1:2,9:14:17.39:165,17,0	1/1:8,0:25:44.22:200,44,0	1/1:2,8:11:10.09:140,10,0	1/1:6,10:18:37.84:272,38,0	1/1:8,11:22:25.38:272,25,0	1/1:8,13:22:43.22:378,43,0	1/1:8,6:14:11.54:128,12,0	1/1:7,17:25:36.56:289,37,0	1/1:3,10:14:20.68:162,21,0	1/1:3,12:15:23.94:201,24,0	1/1:14,15:31:15.40:280,15,0	1/1:6,18:24:50.32:425,50,0	1/1:15,7:24:20.06:184,20,0	1/1:12,2:19:16.46:115,16,0	1/1:4,4:8:8.93:75,9,0	1/1:7,2:13:18.35:101,18,0	0/0:13,1:17:7.34:0,7,320	0/0:20,2:28:17.12:0,17,623	0/1:4,13:17:2.45:202,0,2	1/1:7,14:24:9.71:306,10,0	1/1:7,9:19:23.05:202,23,0	1/1:2,7:12:14.41:140,14,0
chr10	68906717	.	GT	G	702.40	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.228;DP=894;FS=0.875;HRun=1;HaplotypeScore=135.4985;InbreedingCoeff=0.9960;MQ=86.54;MQ0=0;MQRankSum=-3.678;QD=31.93;ReadPosRankSum=2.029;VQSLOD=3.4528;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:66,0:66:99:0,193,3000	0/0:8,0:8:21.07:0,21,313	0/0:32,0:32:96.33:0,96,1535	0/0:27,0:27:78.18:0,78,1190	0/0:30,0:30:87.30:0,87,1378	0/0:24,0:24:72.24:0,72,1076	0/0:39,0:39:99:0,117,1666	0/0:32,0:32:96.31:0,96,1482	0/0:29,0:29:87.25:0,87,1255	0/0:40,0:40:99:0,117,1869	0/0:22,0:22:66.21:0,66,1029	0/0:46,0:46:99:0,138,1976	0/0:30,0:30:90.30:0,90,1313	0/0:47,0:47:99:0,138,1970	0/0:45,0:45:99:0,135,1988	0/0:41,0:41:99:0,123,1766	0/0:36,0:36:99:0,108,1512	1/1:0,22:22:57.19:797,57,0	0/0:33,0:33:99:0,99,1463	0/0:19,0:19:57.19:0,57,849	0/0:47,0:47:99:0,141,2048	0/0:29,0:29:84.24:0,84,1187	0/0:20,0:20:60.15:0,60,921	0/0:28,0:28:84.24:0,84,1315	0/0:18,0:18:54.18:0,54,792	0/0:34,0:34:99:0,102,1529	0/0:36,0:35:99:0,108,1599	0/0:14,0:14:42.14:0,42,629
chr10	68907288	.	CAG	C	1392.17	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.133;DP=670;FS=0.000;HRun=0;HaplotypeScore=78.4563;InbreedingCoeff=0.9692;MQ=57.12;MQ0=6;MQRankSum=2.380;QD=36.64;ReadPosRankSum=-3.633;VQSLOD=4.5659;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:75.26:0,75,1376	0/0:17,0:17:51.17:0,51,955	0/0:13,0:4:12.04:0,12,221	0/0:23,0:12:33.09:0,33,608	0/0:25,0:25:60.17:0,60,1095	0/0:19,0:19:51.17:0,51,955	0/0:22,0:22:66.23:0,66,1215	1/1:1,36:38:99:1487,105,0	0/0:18,0:18:51.17:0,51,945	0/0:22,0:22:66.22:0,66,1206	0/0:14,0:13:39.13:0,39,730	0/0:30,0:30:90.31:0,90,1663	0/0:27,0:27:78.25:0,78,1421	0/0:32,0:32:93.32:0,93,1718	0/0:26,0:26:78.25:0,78,1414	0/0:31,0:31:93.32:0,93,1721	0/0:34,0:34:93.29:0,93,1675	0/0:28,0:28:81.23:0,81,1447	0/0:22,0:21:63.22:0,63,1153	0/0:19,0:19:54.17:0,54,965	0/0:34,0:34:93.29:0,93,1659	0/0:11,0:11:30.10:0,30,562	0/0:15,0:15:32.52:0,33,616	0/0:33,0:33:99:0,99,1818	0/0:20,0:20:57.20:0,57,1068	0/0:26,0:26:69.24:0,69,1293	0/0:33,0:33:93.32:0,93,1734	0/0:12,0:12:36.12:0,36,674
chr10	68908820	.	GTC	G	685.78	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.512;DP=641;FS=4.910;HRun=0;HaplotypeScore=74.7167;InbreedingCoeff=0.9699;MQ=75.16;MQ0=2;MQRankSum=-1.368;QD=29.82;ReadPosRankSum=0.499;VQSLOD=5.0733;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:57.20:0,57,1101	0/0:15,0:15:45.15:0,45,869	0/0:15,0:15:41.46:0,41,648	0/0:15,0:15:31.59:0,32,510	0/0:21,0:21:63.19:0,63,1150	0/0:29,0:29:87.30:0,87,1681	0/0:15,0:15:45.14:0,45,835	0/0:25,0:25:75.26:0,75,1429	0/0:19,0:19:54.17:0,54,1009	0/0:31,0:31:93.31:0,93,1763	0/0:22,0:22:66.21:0,66,1201	0/0:22,0:22:66.21:0,66,1229	0/0:26,0:26:78.27:0,78,1489	0/0:18,0:18:51.17:0,51,975	0/0:29,0:29:84.29:0,84,1593	0/0:31,0:31:93.32:0,93,1779	0/0:27,0:27:81.26:0,81,1512	1/1:0,23:21:51.17:781,51,0	0/0:20,0:20:54.18:0,54,1026	0/0:31,0:31:93.29:0,93,1704	0/0:19,0:19:57.16:0,57,1022	0/0:33,0:33:96.33:0,96,1816	0/0:19,0:19:57.20:0,57,1081	0/0:26,0:26:78.27:0,78,1496	0/0:30,0:30:90.31:0,90,1722	0/0:24,0:24:72.23:0,72,1299	0/0:32,0:31:96.29:0,96,1787	0/0:4,0:4:12.04:0,12,211
chr10	68909336	.	GT	G	8724.17	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=10.842;DP=595;FS=0.348;HRun=10;HaplotypeScore=59.6023;InbreedingCoeff=0.9832;MQ=73.58;MQ0=0;MQRankSum=-1.751;QD=21.49;ReadPosRankSum=3.911;VQSLOD=5.6050;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:66.16:0,66,715	1/1:0,8:8:24:208,24,0	0/0:19,1:18:10.21:0,10,226	0/0:6,0:6:10.82:0,11,88	0/0:28,0:30:77.96:0,78,817	1/1:2,17:19:47.99:417,48,0	1/1:3,17:21:47.01:397,47,0	0/0:37,1:38:67.22:0,67,949	1/1:2,16:18:38.99:339,39,0	0/0:18,1:19:22.07:0,22,472	0/0:18,0:18:45.12:0,45,497	1/1:4,24:28:56.95:494,57,0	1/1:4,20:24:23.88:436,24,0	1/1:0,23:23:65.99:573,66,0	1/1:1,23:24:62.99:547,63,0	1/1:1,22:23:62.99:547,63,0	1/1:2,20:22:31.57:489,32,0	1/1:0,22:22:62.99:547,63,0	1/1:4,18:22:53.98:469,54,0	1/1:0,27:27:71.96:625,72,0	1/1:3,10:13:20.99:182,21,0	1/1:2,18:20:50.98:443,51,0	0/0:18,0:18:48.12:0,48,525	0/0:17,0:17:45.12:0,45,498	1/1:0,26:26:74.99:651,75,0	1/1:4,26:30:17.59:606,18,0	1/1:3,20:23:53.98:469,54,0	1/1:3,10:13:32.99:286,33,0
chr10	68909714	.	AT	A	13395.66	PASS	AC=36;AF=0.667;AN=54;BaseQRankSum=12.294;DP=531;FS=11.446;HRun=1;HaplotypeScore=85.5529;InbreedingCoeff=0.9872;MQ=83.95;MQ0=1;MQRankSum=-4.193;QD=37.52;ReadPosRankSum=3.946;VQSLOD=4.6297;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:75.26:0,75,1198	1/1:0,8:8:24.08:336,24,0	0/0:24,0:23:63.12:0,63,869	0/0:22,0:21:59.94:0,60,886	0/0:17,0:17:51.17:0,51,808	1/1:0,13:13:30.05:396,30,0	1/1:0,20:20:54.18:754,54,0	1/1:0,35:34:99:1386,102,0	1/1:0,8:8:21.07:294,21,0	0/0:22,0:22:66.22:0,66,1033	0/0:13,0:13:36.12:0,36,575	1/1:0,19:19:45.15:629,45,0	1/1:0,19:19:51.17:708,51,0	1/1:0,18:18:45.15:629,45,0	1/1:0,19:19:48.16:671,48,0	1/1:0,17:17:45.15:630,45,0	1/1:0,25:25:69.23:965,69,0	0/0:22,0:22:60.20:0,60,949	1/1:0,19:19:54.17:740,54,0	1/1:0,14:14:42.10:565,42,0	1/1:0,60:60:99:2307,166,0	1/1:0,13:13:36.12:504,36,0	0/0:5,0:5:15.05:0,15,237	0/0:23,0:23:63.19:0,63,981	1/1:0,9:9:24.08:336,24,0	1/1:1,18:19:9.22:707,9,0	1/1:0,22:22:60.20:839,60,0	./.
chr10	68910002	.	T	TA	6676.89	PASS	AC=36;AF=0.667;AN=54;BaseQRankSum=2.217;DP=395;FS=5.531;HRun=8;HaplotypeScore=46.4103;InbreedingCoeff=0.9598;MQ=60.72;MQ0=1;MQRankSum=-0.296;QD=26.08;ReadPosRankSum=2.367;VQSLOD=5.5763;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:72:0,72,651	1/1:0,2:2:6.02:69,6,0	0/0:8,0:6:11.99:0,12,106	0/0:12,0:12:17.68:0,18,148	0/0:16,0:16:39:0,39,351	1/1:2,10:12:27.08:311,27,0	1/1:2,12:14:33.10:381,33,0	0/0:31,0:31:81.03:0,81,737	1/1:1,15:16:33.03:364,33,0	0/0:14,0:14:39.02:0,39,357	0/0:11,0:11:27:0,27,243	1/1:2,17:19:48.13:546,48,0	1/1:2,14:17:38.91:409,39,0	1/1:1,12:13:39.02:419,39,0	1/1:0,13:13:36.11:415,36,0	1/1:0,16:16:39.12:450,39,0	1/1:4,25:29:60.18:692,60,0	1/1:3,19:22:48.10:539,48,0	1/1:3,8:10:27.04:297,27,0	1/1:1,7:8:21.06:242,21,0	1/1:3,7:9:15.04:173,15,0	1/1:0,3:3:8.86:68,9,0	0/0:6,0:6:15:0,15,137	0/0:7,0:6:18.01:0,18,165	1/1:2,12:13:27.08:311,27,0	1/1:3,16:17:39.07:435,39,0	1/1:0,18:18:48.14:554,48,0	./.
chr10	68910263	.	TTCC	T	6750.79	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=16.307;DP=500;FS=13.464;HRun=0;HaplotypeScore=181.4294;InbreedingCoeff=0.9647;MQ=82.56;MQ0=0;MQRankSum=-16.665;QD=24.46;ReadPosRankSum=4.651;VQSLOD=3.6672;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,105,2368	1/1:1,3:4:9.02:94,9,0	0/0:24,0:24:69.08:0,69,1448	0/0:15,0:15:39.13:0,39,851	0/0:20,0:19:57.20:0,57,1282	1/1:5,13:18:39.10:417,39,0	1/1:9,6:15:21.06:238,21,0	0/0:33,0:32:71.29:0,71,1106	1/1:8,8:16:27.01:271,27,0	0/0:22,0:22:66.23:0,66,1522	0/0:30,0:30:72.25:0,72,1648	1/1:4,13:17:45.07:493,45,0	1/1:7,16:23:47.91:496,48,0	1/1:2,8:10:26.93:267,27,0	1/1:1,17:18:51.13:562,51,0	1/1:4,13:17:45:474,45,0	1/1:7,4:11:12.03:127,12,0	0/0:20,0:20:60.18:0,60,801	1/1:5,6:11:18.05:243,18,0	1/1:4,11:15:39.07:429,39,0	1/1:2,2:4:6.02:64,6,0	1/1:1,12:13:36.02:350,36,0	0/0:11,0:11:30.10:0,30,692	0/0:13,0:13:39.13:0,39,891	1/1:6,18:22:48.11:502,48,0	1/1:5,25:30:56.27:929,56,0	1/1:7,18:25:57.13:654,57,0	1/1:1,4:5:12.04:141,12,0
chr10	68910270	.	T	TAGAG	10055.23	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=17.053;DP=437;FS=11.704;HRun=0;HaplotypeScore=172.8217;InbreedingCoeff=0.9635;MQ=87.61;MQ0=0;MQRankSum=-16.811;QD=49.05;ReadPosRankSum=7.039;VQSLOD=4.8414;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,99,1940	1/1:3,0:3:9.03:147,9,0	0/0:24,0:24:66.19:0,66,1194	0/0:15,0:15:36.12:0,36,674	0/0:20,0:19:60.20:0,60,1163	1/1:13,0:13:39.13:662,39,0	1/1:6,0:6:18.06:303,18,0	0/0:33,0:32:93.31:0,93,1763	1/1:8,0:8:24.08:396,24,0	0/0:27,0:27:72.24:0,72,1406	0/0:31,0:31:75.24:0,75,1424	1/1:13,0:13:39.13:670,39,0	1/1:16,0:16:48.16:790,48,0	1/1:9,0:9:27.08:427,27,0	1/1:18,1:19:31.86:836,32,0	1/1:14,0:14:34.42:611,34,0	1/1:6,0:6:11.56:200,12,0	0/0:19,0:19:57.20:0,57,1138	1/1:5,1:6:18.06:374,18,0	1/1:9,2:11:33.11:592,33,0	1/1:2,0:2:6.02:102,6,0	1/1:12,0:12:36.12:571,36,0	0/0:12,0:12:33.11:0,33,659	0/0:15,0:15:39.13:0,39,779	1/1:19,0:17:47.80:798,48,0	1/1:25,0:25:72.25:1410,72,0	1/1:18,0:17:54.18:945,54,0	1/1:5,0:5:12.04:218,12,0
chr10	68910271	.	A	AG	1799.20	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=17.164;DP=441;FS=12.594;HRun=0;HaplotypeScore=180.8138;InbreedingCoeff=0.9467;MQ=87.44;MQ0=0;MQRankSum=-16.896;QD=8.69;ReadPosRankSum=8.032;VQSLOD=1.8715;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,102,1408	1/1:0,3:3:6.96:23,7,0	0/0:25,0:25:68.36:0,68,917	0/0:14,0:14:39.09:0,39,514	0/0:20,0:19:60.19:0,60,823	1/1:0,13:13:32.84:122,33,0	1/1:0,6:6:14.79:55,15,0	0/0:34,0:33:93.30:0,93,1286	1/1:0,8:8:17.49:66,17,0	0/0:27,0:27:81.25:0,81,1090	0/0:31,0:31:78.23:0,78,1044	1/1:0,13:13:33.26:130,33,0	1/1:0,16:16:36.45:140,36,0	1/1:1,8:9:17.57:67,18,0	1/1:3,16:19:32.69:146,33,0	1/1:2,13:15:29.33:113,29,0	1/1:3,4:7:8.50:33,8,0	0/0:19,0:19:57.19:0,57,797	1/1:1,5:6:16.90:113,17,0	1/1:2,9:11:26.96:124,27,0	1/1:0,2:2:5.19:20,5,0	1/1:0,12:12:21.53:75,22,0	0/0:12,0:12:33.11:0,33,462	0/0:16,0:16:45.12:0,45,594	1/1:1,18:17:38.40:134,38,0	1/1:0,25:25:70.13:406,70,0	1/1:0,17:17:43.70:202,44,0	1/1:1,4:5:10.94:51,11,0
chr10	68910272	.	A	AGAATCT	20087.31	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=17.483;DP=502;FS=14.867;HRun=0;HaplotypeScore=211.9996;InbreedingCoeff=0.9835;MQ=80.93;MQ0=0;MQRankSum=-18.149;QD=73.85;ReadPosRankSum=4.412;VQSLOD=4.4592;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,102,2540	1/1:1,3:4:12.04:308,12,0	0/0:23,0:23:65.22:0,65,1454	0/0:14,0:14:42.12:0,42,941	0/0:19,0:18:57.20:0,57,1458	1/1:4,13:17:51.18:1357,51,0	1/1:3,6:9:21.07:525,21,0	0/0:33,0:32:93.30:0,93,2181	1/1:9,8:17:48.16:1265,48,0	0/0:28,0:28:81.28:0,81,1965	0/0:28,0:28:72.25:0,72,1788	1/1:5,13:18:54.14:1390,54,0	1/1:7,15:23:69.19:1799,69,0	1/1:7,8:15:39.13:1020,39,0	1/1:7,16:23:69.24:1652,69,0	1/1:8,13:21:60.19:1513,60,0	1/1:5,4:9:27.04:578,27,0	0/0:20,0:20:57.20:0,57,1455	1/1:5,5:10:27.07:709,27,0	1/1:3,9:12:36.12:956,36,0	1/1:1,2:3:9.03:242,9,0	1/1:0,12:12:36.12:908,36,0	0/0:12,0:12:36.11:0,36,868	0/0:17,0:17:48.15:0,48,1116	1/1:3,18:19:57.20:1469,57,0	1/1:4,25:29:78.23:2110,78,0	1/1:6,16:23:72.25:1936,72,0	1/1:1,4:5:15.04:347,15,0
chr10	68913554	.	A	AAAAC	998.64	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=-6.094;DP=629;FS=7.682;HRun=0;HaplotypeScore=136.0872;InbreedingCoeff=0.6785;MQ=65.95;MQ0=7;MQRankSum=-3.888;QD=18.84;ReadPosRankSum=-5.204;VQSLOD=1.7703;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:78.18:0,78,1197	0/0:7,0:7:18.05:0,18,271	0/0:33,0:15:9.02:0,9,122	0/0:42,0:19:21.07:0,21,311	0/0:31,0:31:57.16:0,57,837	0/0:32,0:32:66.21:0,66,1028	0/0:10,0:10:21.06:0,21,319	1/1:11,16:29:54:1093,54,0	0/0:12,0:12:33.11:0,33,537	0/0:24,0:24:41.98:0,42,682	0/0:21,0:21:48.16:0,48,757	0/0:29,0:29:78.25:0,78,1224	0/0:30,0:30:72.18:0,72,1093	0/0:16,0:16:42.14:0,42,667	0/0:21,0:21:51.17:0,51,805	0/0:20,0:20:51.14:0,51,740	0/0:25,0:25:54.16:0,54,848	0/1:24,0:24:2.76:3,0,366	0/0:18,0:18:24.08:0,24,370	0/0:26,0:26:54.17:0,54,827	0/0:8,0:8:18.06:0,18,293	0/0:15,0:15:30.09:0,30,466	0/0:19,0:19:51.17:0,51,808	0/0:11,0:11:27.09:0,27,439	0/0:20,0:20:42.10:0,42,628	0/0:32,0:32:81.25:0,81,1231	0/0:35,0:34:78.23:0,78,1196	0/0:5,0:5:12.04:0,12,195
chr10	68914428	.	G	GTGAACTC	44163.93	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=-0.334;DP=647;FS=1.475;HRun=0;HaplotypeScore=127.2386;InbreedingCoeff=0.9707;MQ=62.49;MQ0=0;MQRankSum=-16.862;QD=95.59;ReadPosRankSum=2.584;VQSLOD=6.1075;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:81.25:0,81,2201	1/1:0,6:8:18.06:752,18,0	0/0:12,0:12:7.66:0,8,350	0/0:10,0:10:14.26:0,14,253	0/0:32,0:32:96.32:0,96,2575	1/1:0,13:17:42.14:1746,42,0	1/1:0,11:18:30.10:1250,30,0	1/1:1,17:28:78.22:2746,78,0	1/1:0,24:29:66.09:2753,66,0	0/0:35,0:35:99:0,105,2864	0/0:24,0:24:72.22:0,72,1819	1/1:0,26:30:72.25:3003,72,0	1/1:0,26:29:72.25:3004,72,0	1/1:1,19:30:66.17:2624,66,0	1/1:0,24:27:72.25:3002,72,0	1/1:0,27:35:78.04:3255,78,0	1/1:0,11:16:30.02:1056,30,0	1/1:0,8:9:18.06:753,18,0	1/1:0,17:25:74.93:2830,75,0	1/1:0,26:29:81.12:2991,81,0	1/1:0,6:12:11.97:394,12,0	1/1:0,29:33:81.19:3094,81,0	0/0:23,0:23:69.16:0,69,1630	0/0:21,0:21:63.22:0,63,1757	1/1:0,22:27:63.15:2434,63,0	1/1:0,18:23:69.24:2598,69,0	1/1:1,26:32:81.28:3378,81,0	1/1:0,4:5:12.04:502,12,0
chr10	68916016	.	T	TA	10991	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-14.498;DP=563;FS=36.051;HRun=8;HaplotypeScore=49.2879;InbreedingCoeff=0.9896;MQ=75.11;MQ0=0;MQRankSum=-0.232;QD=28.85;ReadPosRankSum=1.253;VQSLOD=2.7639;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,1:27:31.39:0,31,533	1/1:0,11:11:27.04:297,27,0	0/0:14,0:14:29.97:0,30,264	0/0:8,0:7:12:0,12,108	0/0:34,0:34:99:0,102,919	1/1:3,29:32:65.24:821,65,0	1/1:3,12:15:30.09:346,30,0	1/1:7,10:17:30.06:326,30,0	1/1:1,16:17:39.12:450,39,0	0/0:21,0:21:60.03:0,60,549	0/0:27,0:27:78.03:0,78,710	1/1:0,12:12:36.11:415,36,0	1/1:0,15:15:39.12:450,39,0	1/1:0,14:14:42.12:485,42,0	1/1:3,27:30:78.23:900,78,0	1/1:2,14:16:36.11:416,36,0	1/1:0,31:31:87.26:1004,87,0	0/0:18,0:18:45.01:0,45,406	1/1:1,26:27:78.19:876,78,0	1/1:4,26:30:50.77:838,51,0	1/1:1,4:5:12.04:138,12,0	1/1:3,10:13:27.08:312,27,0	0/0:20,0:20:54.02:0,54,494	0/0:13,0:13:36.02:0,36,329	1/1:5,27:32:75.22:866,75,0	1/1:0,21:23:68.84:735,69,0	1/1:0,27:27:78.23:900,78,0	1/1:1,13:14:36.11:415,36,0
chr10	68916517	.	C	CTT	617.39	PASS	AB=0.517;AC=1;AF=0.018;AN=56;BaseQRankSum=3.486;DP=592;FS=11.600;HRun=0;HaplotypeScore=72.3680;InbreedingCoeff=0.1537;MQ=88.50;MQ0=0;MQRankSum=-2.330;QD=41.16;ReadPosRankSum=1.192;VQSLOD=4.8106;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:63.20:0,63,1004	0/0:13,0:13:39.12:0,39,611	0/0:19,0:19:45.05:0,45,638	0/0:29,0:29:68.22:0,68,1042	0/0:18,0:18:51.04:0,51,794	0/0:24,0:24:72.23:0,72,1148	0/0:16,0:16:48.16:0,48,780	0/0:24,0:24:69.24:0,69,1123	0/0:17,0:17:51.17:0,51,830	0/0:28,0:28:81.28:0,81,1322	0/0:24,0:24:72.23:0,72,1148	0/0:21,0:21:63.22:0,63,1025	0/0:30,0:30:84.29:0,84,1370	0/0:21,0:21:63.20:0,63,1001	0/0:25,0:25:72.20:0,72,1103	0/0:21,0:21:60.19:0,60,955	0/0:27,0:27:81.28:0,81,1310	0/1:1,14:15:9.88:692,0,10	0/0:13,0:13:39.13:0,39,635	0/0:21,0:21:60.20:0,60,976	0/0:25,0:25:69.69:0,70,1103	0/0:25,0:25:72.25:0,72,1175	0/0:18,0:18:51.17:0,51,832	0/0:24,0:24:69.22:0,69,1101	0/0:19,0:19:57.18:0,57,906	0/0:19,0:19:57.19:0,57,930	0/0:26,0:26:78.27:0,78,1272	0/0:9,0:9:27.09:0,27,440
chr10	68919299	.	AGGGTGAGCG	A	6369.44	PASS	AB=1.000;AC=32;AF=0.615;AN=52;BaseQRankSum=-1.838;DP=304;FS=0.538;HRun=0;HaplotypeScore=93.8538;InbreedingCoeff=0.6252;MQ=81.66;MQ0=0;MQRankSum=-1.580;QD=31.38;ReadPosRankSum=3.948;VQSLOD=4.1896;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:39.12:0,39,893	1/1:5,0:5:12.03:211,12,0	0/0:11,0:11:7.89:0,8,216	0/0:19,0:17:10.82:0,11,404	0/0:17,0:17:30.02:0,30,525	1/1:14,0:14:33.10:696,33,0	1/1:10,0:10:21.06:394,21,0	1/1:8,0:8:18.05:280,18,0	1/1:6,0:6:14.88:242,15,0	0/0:10,0:10:14.92:0,15,308	0/0:4,0:4:6.02:0,6,169	1/1:16,0:16:20.29:842,20,0	1/1:11,0:11:12.08:211,12,0	0/1:18,0:18:99:511,0,101	0/1:8,0:8:31.03:168,0,31	0/1:10,0:10:79.36:156,0,79	1/1:17,0:17:11.99:328,12,0	1/1:11,0:11:22.26:343,22,0	1/1:5,4:9:12.01:149,12,0	1/1:2,4:6:12.04:156,12,0	1/1:21,0:20:26.62:536,27,0	./.	0/0:10,0:10:24.07:0,24,475	0/0:11,0:11:24.04:0,24,405	0/1:11,0:11:4.28:383,0,4	1/1:4,9:13:26.96:418,27,0	1/1:9,0:9:15.05:347,15,0	./.
chr10	68920934	.	A	AG	1223.56	PASS	AB=1.000;AC=45;AF=0.900;AN=50;BaseQRankSum=-2.493;DP=128;FS=0.000;HRun=5;HaplotypeScore=38.7301;InbreedingCoeff=0.3643;MQ=79.49;MQ0=0;MQRankSum=-3.629;QD=11.02;ReadPosRankSum=-1.404;VQSLOD=-0.0090;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,2:6:7.81:45,8,0	./.	0/0:13,0:9:17.53:0,18,184	0/0:2,0:1:1.25:0,1,3	1/1:8,4:12:0.89:2,1,0	1/1:1,2:3:2.78:41,3,0	1/1:2,1:3:5.86:38,6,0	1/1:3,6:7:13.84:140,14,0	1/1:4,2:6:7.20:67,7,0	1/1:1,2:3:9.02:96,9,0	1/1:4,1:5:2.37:8,2,0	1/1:3,3:6:9.55:113,10,0	1/1:4,1:5:4.73:44,5,0	1/1:3,1:3:7.56:33,8,0	1/1:4,1:5:9.31:54,9,0	1/1:2,2:5:9.48:83,9,0	1/1:2,2:4:9.01:84,9,0	1/1:1,4:5:11.90:138,12,0	1/1:0,2:1:3.01:34,3,0	0/1:2,0:2:0:0,0,0	1/1:4,2:6:6.02:83,6,0	1/1:4,0:4:2.80:13,3,0	./.	1/1:1,0:1:1.25:3,1,0	1/1:4,1:5:6:54,6,0	1/1:2,1:3:5.38:41,5,0	1/1:6,1:7:9.53:112,10,0	./.
chr10	68920935	.	GAGAAAA	G	1896.45	PASS	AB=1.000;AC=46;AF=0.920;AN=50;BaseQRankSum=-3.250;DP=125;FS=0.000;HRun=0;HaplotypeScore=43.4729;InbreedingCoeff=0.1493;MQ=80.38;MQ0=0;MQRankSum=-2.957;QD=15.54;ReadPosRankSum=-0.644;VQSLOD=2.0645;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,0:5:9.03:144,9,0	./.	0/1:13,0:9:20.51:21,0,387	0/0:2,0:1:2.96:0,3,19	1/1:12,0:12:3.01:56,3,0	1/1:3,0:3:5.71:71,6,0	1/1:3,0:3:8.90:137,9,0	1/1:9,0:7:8.45:113,8,0	1/1:6,0:6:9.88:90,10,0	1/1:3,0:3:9.03:136,9,0	1/1:5,0:5:3.01:30,3,0	1/1:7,0:7:9.43:84,9,0	1/1:5,0:5:3.80:57,4,0	1/1:4,0:3:8.77:54,9,0	1/1:5,0:5:12.02:157,12,0	1/1:5,0:5:2.15:99,2,0	1/1:2,0:2:6:71,6,0	1/1:5,0:5:11.81:142,12,0	1/1:2,0:1:3:26,3,0	0/1:2,0:2:0:0,0,0	1/1:6,0:6:6.02:68,6,0	1/1:1,3:4:3.01:58,3,0	./.	1/1:1,0:1:0.89:2,1,0	1/1:2,3:5:6:73,6,0	1/1:3,0:3:9.02:141,9,0	1/1:6,0:7:5.96:165,6,0	./.
chr10	68920937	.	GAAAA	G	2564.58	PASS	AB=0.667;AC=45;AF=0.900;AN=50;BaseQRankSum=-2.421;DP=124;FS=3.407;HRun=5;HaplotypeScore=37.1555;InbreedingCoeff=0.3643;MQ=80.56;MQ0=1;MQRankSum=-3.122;QD=24.19;ReadPosRankSum=0.709;VQSLOD=-0.6594;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,4:5:9.03:116,9,0	./.	0/0:13,0:9:4.71:0,5,331	0/0:4,0:1:2.92:0,3,17	1/1:0,12:12:3.01:36,3,0	1/1:0,2:2:6.02:93,6,0	1/1:0,3:3:9.03:141,9,0	1/1:1,7:6:9.03:152,9,0	1/1:0,4:5:11.40:157,11,0	1/1:0,2:3:9.03:150,9,0	1/1:1,5:5:3.01:49,3,0	1/1:0,3:7:16.63:188,17,0	1/1:0,1:4:8.99:84,9,0	1/1:0,1:3:8.99:80,9,0	1/1:0,5:5:12.04:213,12,0	1/1:2,4:6:13.71:232,14,0	1/1:0,2:2:6.02:84,6,0	1/1:0,4:5:14.54:212,15,0	1/1:0,2:1:3.01:48,3,0	0/1:1,1:2:0:0,0,0	1/1:0,5:5:6.02:110,6,0	1/1:3,1:4:3.01:58,3,0	./.	1/1:0,0:1:0.89:2,1,0	1/1:3,2:5:6.02:92,6,0	1/1:0,3:3:9.03:139,9,0	1/1:2,2:7:13.86:232,14,0	./.
chr10	68921013	.	T	TAA	698.68	PASS	AB=1.000;AC=3;AF=0.056;AN=54;BaseQRankSum=-5.342;DP=246;FS=6.499;HRun=7;HaplotypeScore=37.2463;InbreedingCoeff=0.4862;MQ=72.69;MQ0=1;MQRankSum=0.791;QD=24.09;ReadPosRankSum=2.352;VQSLOD=1.3444;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:45.10:0,45,510	0/0:4,0:4:12.04:0,12,140	0/0:8,0:8:14.77:0,15,149	0/1:11,0:6:14.48:14,0,25	0/0:14,0:14:36.09:0,36,409	0/0:14,0:14:42.12:0,42,489	0/0:5,0:5:9.01:0,9,105	0/0:22,0:21:54.14:0,54,619	0/0:5,0:5:9.01:0,9,105	0/0:9,0:9:27.08:0,27,314	0/0:7,0:6:15.04:0,15,175	0/0:10,0:10:18.03:0,18,210	0/0:5,0:5:15.04:0,15,175	0/0:7,0:7:21.06:0,21,245	0/0:5,0:5:9.03:0,9,105	0/0:9,0:9:24.03:0,24,256	0/0:11,0:11:30.09:0,30,350	1/1:1,17:18:48.16:788,48,0	0/0:5,0:5:12:0,12,127	0/0:9,0:9:27.08:0,27,315	0/0:6,0:6:15.04:0,15,175	0/0:4,0:4:9.01:0,9,95	0/0:3,0:3:9.03:0,9,105	./.	0/0:7,0:7:21.06:0,21,245	0/0:14,0:14:42.12:0,42,489	0/0:13,0:13:39.12:0,39,453	0/0:5,0:5:15.04:0,15,175
chr10	68923415	.	T	TGG	9857.91	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=5.329;DP=547;FS=9.265;HRun=8;HaplotypeScore=90.0776;InbreedingCoeff=0.9957;MQ=86.31;MQ0=1;MQRankSum=-4.365;QD=28.49;ReadPosRankSum=1.549;VQSLOD=4.1453;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:63.10:0,63,678	1/1:2,10:12:27.09:428,27,0	0/0:24,0:24:47.76:0,48,577	0/0:17,0:17:17.92:0,18,233	0/0:18,0:18:48.12:0,48,534	1/1:4,15:19:30.06:448,30,0	1/1:1,17:20:44.64:675,45,0	0/0:27,0:27:60.15:0,60,668	1/1:2,16:20:44.64:675,45,0	0/0:26,0:26:57.08:0,57,617	0/0:23,0:24:65.83:0,66,713	1/1:3,10:14:24.08:379,24,0	1/1:1,17:19:42.14:660,42,0	1/1:2,15:21:38.61:561,39,0	1/1:2,15:18:47.65:711,48,0	1/1:5,24:29:60.20:952,60,0	1/1:3,15:19:39.02:575,39,0	1/1:3,0:23:39.93:137,40,0	1/1:7,11:18:32.13:458,32,0	1/1:8,11:19:21.03:297,21,0	1/1:0,5:6:17.53:224,18,0	1/1:4,12:17:33.07:496,33,0	0/0:23,0:23:66.18:0,66,735	0/0:16,0:16:45.12:0,45,501	1/1:2,9:13:29.59:437,30,0	1/1:6,13:21:41.61:602,42,0	1/1:6,21:27:44.83:714,45,0	1/1:3,7:10:27.09:426,27,0
chr10	68924011	.	GA	G	918.42	PASS	AB=0.795;AC=16;AF=0.286;AN=56;BaseQRankSum=6.787;DP=666;FS=9.410;HRun=15;HaplotypeScore=73.9990;InbreedingCoeff=0.3106;MQ=70.04;MQ0=2;MQRankSum=-0.378;QD=3.35;ReadPosRankSum=0.211;VQSLOD=-0.1877;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:6,17:24:11.31:146,0,11	0/0:19,0:20:37.72:0,38,284	0/0:32,0:21:10.84:0,11,155	0/1:20,1:11:5.05:5,0,39	1/1:5,12:18:7.58:170,8,0	0/1:22,4:27:19.79:20,0,319	0/1:12,2:16:3.38:3,0,242	1/1:8,15:24:13.92:206,14,0	0/0:16,3:19:6.42:0,6,293	1/1:11,17:28:47.47:286,47,0	0/1:7,11:18:30.01:91,0,30	0/1:21,3:24:9.85:10,0,279	0/0:19,1:22:2.69:0,3,243	0/0:24,0:26:28.65:0,29,353	0/1:23,5:28:0.86:1,0,355	0/0:34,0:34:41.75:0,42,459	0/0:22,0:27:47.32:0,47,363	1/1:3,0:19:24.44:70,24,0	0/0:14,0:15:11.21:0,11,212	0/0:26,1:27:40.68:0,41,465	0/0:13,0:13:20.95:0,21,177	0/0:23,1:25:34.25:0,34,381	0/0:25,1:26:38.13:0,38,397	0/0:26,2:28:37.56:0,38,428	0/0:33,0:35:80.81:0,81,695	0/1:17,8:26:80.38:80,0,180	0/0:26,2:33:32.94:0,33,495	0/0:9,0:9:17.92:0,18,149
chr10	68925354	.	C	CAAGTGG	1002.82	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=0.534;DP=671;FS=1.263;HRun=0;HaplotypeScore=135.1729;InbreedingCoeff=0.9857;MQ=75.47;MQ0=1;MQRankSum=-5.386;QD=83.57;ReadPosRankSum=0.372;VQSLOD=4.5439;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,129,3138	0/0:19,0:19:54.19:0,54,1280	0/0:10,0:10:20.63:0,21,340	0/0:16,0:16:29.65:0,30,564	0/0:33,0:33:93.30:0,93,2173	0/0:20,0:20:60.21:0,60,1409	0/0:21,0:21:63.16:0,63,1355	0/0:35,0:35:99:0,102,2337	0/0:23,0:23:69.24:0,69,1659	0/0:27,0:27:75.26:0,75,1792	0/0:21,0:21:60.19:0,60,1382	0/0:21,0:21:63.20:0,63,1479	0/0:29,0:29:87.30:0,87,2138	0/0:28,0:28:72.23:0,72,1616	0/0:36,0:36:99:0,105,2586	0/0:36,0:36:99:0,108,2561	0/0:23,0:23:69.20:0,69,1599	1/1:2,8:12:30.10:1097,30,0	0/0:15,0:15:45.15:0,45,1004	0/0:27,0:27:78.27:0,78,1914	0/0:51,0:50:99:0,144,3412	0/0:22,0:22:66.23:0,66,1624	0/0:9,0:9:27.09:0,27,664	0/0:18,0:18:51.16:0,51,1206	0/0:21,0:21:63.22:0,63,1552	0/0:25,0:25:75.25:0,75,1772	0/0:23,0:23:66.23:0,66,1544	0/0:6,0:6:18.06:0,18,443
chr10	68925767	.	C	CTCTA	1024.62	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.240;DP=627;FS=1.020;HRun=0;HaplotypeScore=118.4484;InbreedingCoeff=0.9910;MQ=75.64;MQ0=0;MQRankSum=-0.882;QD=53.93;ReadPosRankSum=1.320;VQSLOD=5.0253;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:87.30:0,87,1603	0/0:8,0:8:21.07:0,21,392	0/0:18,0:18:26.65:0,27,595	0/0:18,0:18:27.09:0,27,470	0/0:20,0:20:48.16:0,48,876	0/0:22,0:22:57.20:0,57,1031	0/0:15,0:15:45.12:0,45,736	0/0:39,0:39:99:0,102,1800	0/0:21,0:21:63.19:0,63,1126	0/0:21,0:21:60.20:0,60,1076	0/0:19,0:19:48.16:0,48,869	0/0:29,0:29:87.25:0,87,1550	0/0:24,0:24:66.23:0,66,1188	0/0:34,0:34:90.31:0,90,1658	0/0:33,0:33:90.31:0,90,1679	0/0:22,0:22:66.23:0,66,1197	0/0:27,0:27:72.25:0,72,1314	1/1:0,18:19:42.14:1119,42,0	0/0:15,0:15:36.12:0,36,646	0/0:22,0:22:54.05:0,54,965	0/0:37,0:37:96.29:0,96,1704	0/0:10,0:10:30.09:0,30,529	0/0:10,0:10:24.08:0,24,448	0/0:20,0:20:57.20:0,57,1025	0/0:21,0:21:57.19:0,57,1015	0/0:31,0:31:87.30:0,87,1607	0/0:28,0:28:81.28:0,81,1489	0/0:11,0:11:33.11:0,33,606
chr10	68927106	.	GGTGA	G	18448	PASS	AB=0.542;AC=35;AF=0.625;AN=56;BaseQRankSum=15.631;DP=663;FS=8.878;HRun=0;HaplotypeScore=111.7356;InbreedingCoeff=0.9273;MQ=77.66;MQ0=0;MQRankSum=-4.317;QD=46.24;ReadPosRankSum=6.768;VQSLOD=4.8613;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,111,2899	1/1:0,15:15:45.15:872,45,0	0/0:32,0:31:83.09:0,83,2138	0/0:20,0:20:54.19:0,54,1446	0/0:30,0:30:90.26:0,90,2212	1/1:0,16:16:36.12:697,36,0	1/1:1,15:16:36.12:678,36,0	0/0:30,0:30:81.28:0,81,2121	1/1:0,21:21:54.18:1028,54,0	0/0:31,0:31:93.31:0,93,2382	0/0:24,0:24:63.20:0,63,1613	1/1:3,27:30:63.22:1201,63,0	1/1:0,22:23:57.19:1067,57,0	1/1:1,26:27:60.21:1162,60,0	1/1:1,26:27:60.21:1126,60,0	1/1:1,27:28:75.26:1453,75,0	1/1:1,16:17:42.14:814,42,0	0/0:24,0:24:69.24:0,69,1873	1/1:2,11:13:33.06:567,33,0	1/1:2,18:20:50.38:935,50,0	1/1:2,19:20:36.12:698,36,0	1/1:3,26:29:72.25:1375,72,0	0/0:21,0:21:63.20:0,63,1660	0/0:14,0:14:39.09:0,39,1006	1/1:0,21:21:48.16:912,48,0	0/1:4,22:26:12.98:1190,0,13	1/1:1,25:26:69.24:1337,69,0	1/1:0,23:23:69.24:1337,69,0
chr10	68929180	.	CA	C	645.20	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.691;DP=617;FS=4.402;HRun=2;HaplotypeScore=59.3111;InbreedingCoeff=0.9988;MQ=84.32;MQ0=0;MQRankSum=-2.414;QD=33.96;ReadPosRankSum=1.679;VQSLOD=3.9831;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:57.19:0,57,854	0/0:9,0:9:27.09:0,27,405	0/0:20,0:20:57.19:0,57,833	0/0:19,0:19:46.08:0,46,643	0/0:29,0:29:84.27:0,84,1237	0/0:27,0:27:81.27:0,81,1214	0/0:26,0:26:78.25:0,78,1149	0/0:48,0:48:99:0,140,2019	0/0:15,0:15:45.15:0,45,674	0/0:26,0:26:72.24:0,72,1079	0/0:20,0:20:59.78:0,60,844	0/0:17,0:17:51.17:0,51,764	0/0:25,0:25:75.22:0,75,1081	0/0:13,0:13:39.13:0,39,583	0/0:24,0:24:72.24:0,72,1079	0/0:26,0:25:78.25:0,78,1149	0/0:25,0:25:72.23:0,72,1056	1/1:0,19:19:57.19:740,57,0	0/0:19,0:19:54.16:0,54,772	0/0:26,0:26:75.22:0,75,1080	0/0:23,0:23:69.23:0,69,1034	0/0:17,0:17:51.17:0,51,764	0/0:13,0:13:39.12:0,39,566	0/0:16,0:16:45.15:0,45,673	0/0:16,0:16:45.15:0,45,668	0/0:31,0:31:93.32:0,93,1394	0/0:34,0:34:99:0,99,1464	0/0:14,0:14:42.14:0,42,620
chr10	68929375	.	A	ATG	18152.15	PASS	AB=0.580;AC=34;AF=0.607;AN=56;BaseQRankSum=-16.945;DP=787;FS=4.498;HRun=0;HaplotypeScore=91.0247;InbreedingCoeff=0.8398;MQ=71.19;MQ0=1;MQRankSum=-0.735;QD=35.66;ReadPosRankSum=1.406;VQSLOD=7.2707;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,126,1533	1/1:3,9:12:27.09:443,27,0	0/0:24,0:24:42.56:0,43,504	0/0:19,0:18:31.54:0,32,340	0/0:23,0:23:54.15:0,54,655	1/1:5,25:29:32.03:1045,32,0	1/1:9,26:35:69.24:1132,69,0	0/0:24,0:24:57.14:0,57,679	1/1:4,25:29:66.23:1083,66,0	0/0:33,0:33:83.85:0,84,1014	0/0:18,0:18:42.12:0,42,508	1/1:5,24:29:69.24:1131,69,0	1/1:3,29:32:81.28:1329,81,0	1/1:5,29:34:53.10:1381,53,0	1/1:4,29:33:78.27:1280,78,0	1/1:7,31:39:14.61:1343,15,0	1/1:8,29:37:78.26:1264,78,0	0/0:18,0:18:42.13:0,42,521	1/1:11,22:34:72.22:1146,72,0	1/1:7,27:34:12.89:1254,13,0	1/1:7,28:35:72.25:1181,72,0	0/1:6,14:20:41.29:410,0,41	0/0:22,0:23:54:0,54,646	0/0:44,0:46:99:0,114,1376	1/1:3,22:26:63.22:1033,63,0	0/1:6,18:24:48.42:823,0,48	1/1:4,16:21:42.14:679,42,0	1/1:1,4:5:12.04:196,12,0
chr10	68929781	.	G	GA	679.84	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-3.383;DP=692;FS=1.828;HRun=3;HaplotypeScore=65.9397;InbreedingCoeff=0.9975;MQ=90.11;MQ0=0;MQRankSum=-2.305;QD=27.19;ReadPosRankSum=-0.160;VQSLOD=2.7502;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,126,1461	0/0:9,0:9:24.06:0,24,276	0/0:22,0:22:34.07:0,34,576	0/0:30,0:30:81.21:0,81,928	0/0:20,0:20:60.18:0,60,719	0/0:14,0:14:42.10:0,42,482	0/0:24,0:24:57.16:0,57,671	0/0:28,0:28:81.22:0,81,945	0/0:18,0:18:54.17:0,54,648	0/0:26,0:26:75.23:0,75,900	0/0:16,0:16:48.15:0,48,575	0/0:40,0:40:99:0,114,1352	0/0:28,0:28:84.25:0,84,997	0/0:28,0:28:75.23:0,75,899	0/0:22,0:22:63.19:0,63,756	0/0:31,0:31:93.24:0,93,1072	0/0:26,0:26:72.15:0,72,822	1/1:2,23:25:57.14:775,57,0	0/0:31,0:31:84.17:0,84,961	0/0:31,0:31:87.27:0,87,1043	0/0:28,0:28:81.22:0,81,957	0/0:12,0:12:33.10:0,33,395	0/0:18,0:18:48.12:0,48,562	0/0:32,0:32:90.22:0,90,1052	0/0:20,0:20:60.18:0,60,720	0/0:25,0:25:69.21:0,69,828	0/0:26,0:26:78.24:0,78,935	0/0:18,0:18:54.17:0,54,648
chr10	68930938	.	ATCTG	A	110.31	PASS	AB=0.955;AC=3;AF=0.054;AN=56;BaseQRankSum=3.455;DP=612;FS=4.844;HRun=0;HaplotypeScore=97.3556;InbreedingCoeff=0.6947;MQ=70.03;MQ0=2;MQRankSum=-3.688;QD=3.45;ReadPosRankSum=1.204;VQSLOD=1.6672;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:84.27:0,84,1958	0/0:16,0:16:36.12:0,36,876	0/0:25,0:21:30.10:0,30,668	0/0:28,0:26:27.07:0,27,512	0/0:23,0:23:51.16:0,51,1170	0/0:22,0:22:60.19:0,60,1411	0/0:12,0:12:21.05:0,21,453	0/0:50,0:50:99:0,108,2261	0/0:19,0:19:39.13:0,39,938	0/0:26,0:26:52.41:0,52,1195	0/0:13,0:13:33.11:0,33,780	0/0:18,0:18:27.09:0,27,658	0/0:21,0:21:51.16:0,51,1167	0/0:19,0:19:33.11:0,33,793	0/0:15,0:15:27.09:0,27,634	0/0:21,0:21:45.15:0,45,1095	0/1:20,1:21:3.35:3,0,974	1/1:7,4:11:12.04:196,12,0	0/0:19,0:19:21.02:0,21,400	0/0:23,0:23:54.17:0,54,1231	0/0:24,0:24:42.13:0,42,972	0/0:15,0:15:24.08:0,24,562	0/0:14,0:14:30.09:0,30,679	0/0:23,0:23:36.12:0,36,878	0/0:24,0:24:60.19:0,60,1382	0/0:29,0:29:75.21:0,75,1706	0/0:34,0:34:81.26:0,81,1803	0/0:13,0:13:33.11:0,33,799
chr10	68930972	.	C	CATAT	309.32	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.468;DP=489;FS=5.668;HRun=0;HaplotypeScore=83.2937;InbreedingCoeff=0.7388;MQ=63.15;MQ0=0;MQRankSum=-3.601;QD=28.12;ReadPosRankSum=0.165;VQSLOD=2.8449;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:66.20:0,66,1092	0/0:11,0:11:33.11:0,33,574	0/0:19,0:17:18.05:0,18,277	0/0:10,0:8:2.54:0,3,30	0/0:26,0:26:66.21:0,66,1121	0/0:23,0:23:51.17:0,51,863	0/0:7,0:7:18.06:0,18,310	0/0:46,0:46:99:0,99,1552	0/0:11,0:11:33.11:0,33,571	0/0:23,0:23:63.22:0,63,1096	0/0:16,0:16:33.08:0,33,546	0/0:13,0:13:33.10:0,33,546	0/0:17,0:17:36.12:0,36,626	0/0:11,0:11:27.09:0,27,469	0/0:12,0:12:24.08:0,24,415	0/0:15,0:15:36.12:0,36,626	0/0:22,0:22:39.71:0,40,858	1/1:5,6:11:18.02:400,18,0	0/0:7,0:7:18.06:0,18,291	0/0:23,0:23:66.20:0,66,1068	0/0:12,0:12:30.10:0,30,522	0/0:6,0:6:9.03:0,9,156	0/0:6,0:6:9.03:0,9,156	0/0:13,0:13:27.09:0,27,469	0/0:25,0:25:60.19:0,60,1010	0/0:29,0:29:69.23:0,69,1172	0/0:30,0:31:65.42:0,65,1258	0/0:15,0:15:36.07:0,36,566
chr10	68931070	.	T	TA	181.53	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.853;DP=429;FS=0.000;HRun=0;HaplotypeScore=53.9079;InbreedingCoeff=0.7640;MQ=83.54;MQ0=3;MQRankSum=-0.854;QD=16.50;ReadPosRankSum=1.096;VQSLOD=5.4987;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:63.21:0,63,879	0/0:7,0:7:21.05:0,21,263	0/0:31,0:23:49.51:0,50,514	0/0:27,0:12:21.06:0,21,151	0/0:20,0:20:57.17:0,57,761	0/0:23,0:23:66.16:0,66,866	0/0:6,0:6:15.03:0,15,192	0/0:46,0:46:99:0,135,1864	0/0:6,0:6:15.05:0,15,209	0/0:12,0:12:36.11:0,36,473	0/0:20,0:20:60.16:0,60,772	0/0:7,0:7:21.07:0,21,290	0/0:11,0:11:33.08:0,33,435	0/0:3,0:3:9.03:0,9,126	0/0:7,0:7:21.07:0,21,290	0/0:14,0:13:42.14:0,42,587	0/0:23,0:23:66.17:0,66,898	1/1:1,10:11:23.85:275,24,0	0/0:11,0:11:33.09:0,33,429	0/0:19,0:19:57.19:0,57,796	0/0:5,0:5:15.05:0,15,210	0/0:1,0:1:3.01:0,3,42	0/0:10,0:10:27.08:0,27,362	0/0:11,0:11:30.04:0,30,379	0/0:19,0:19:54.17:0,54,727	0/0:27,0:27:78.22:0,78,1011	0/0:21,0:21:63.18:0,63,840	0/0:9,0:9:24.08:0,24,336
chr10	68933687	.	T	TAA	6700.23	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=-0.956;DP=596;FS=4.116;HRun=14;HaplotypeScore=92.2653;InbreedingCoeff=0.8604;MQ=74.29;MQ0=0;MQRankSum=-2.854;QD=15.69;ReadPosRankSum=-2.578;VQSLOD=3.6225;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:48:68.04:0,68,679	1/1:0,4:5:8.56:68,9,0	0/0:20,0:15:0.23:0,0,60	0/0:15,0:15:14.38:0,14,96	0/0:31,0:31:2.34:0,2,398	1/1:7,20:29:24.03:286,24,0	1/1:2,7:11:11.40:126,11,0	1/1:26,0:29:39.48:367,39,0	1/1:4,12:18:24.07:300,24,0	1/1:11,9:24:41.32:428,41,0	1/1:8,6:17:21.26:222,21,0	1/1:5,17:23:29.42:340,29,0	1/1:5,19:27:38.48:463,38,0	1/1:2,16:19:29.46:360,29,0	1/1:7,15:25:32.94:380,33,0	1/1:8,11:24:18.05:235,18,0	1/1:5,14:22:18.30:471,18,0	0/0:14,0:14:29.75:0,30,240	1/1:8,10:23:42.11:415,42,0	1/1:7,10:24:45.82:396,46,0	1/1:6,5:12:7.48:82,7,0	1/1:0,11:13:34.71:385,35,0	0/0:18,0:18:33.65:0,34,265	0/0:16,0:20:46.82:0,47,348	1/1:3,19:25:32.42:381,32,0	1/1:9,12:25:34.82:487,35,0	1/1:6,16:24:11.48:394,11,0	1/1:5,3:8:9.91:112,10,0
chr10	68933727	.	C	CT	1557.02	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-7.310;DP=533;FS=5.067;HRun=1;HaplotypeScore=57.8758;InbreedingCoeff=0.9796;MQ=89.49;MQ0=0;MQRankSum=-2.289;QD=40.97;ReadPosRankSum=-3.816;VQSLOD=2.5621;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:84.27:0,84,1090	0/0:7,0:7:18.06:0,18,234	0/0:25,0:25:66.19:0,66,810	0/0:21,0:20:51:0,51,632	0/0:25,0:25:75.23:0,75,959	0/0:22,0:21:51.17:0,51,662	0/0:11,0:11:24.08:0,24,312	1/1:3,35:38:99:1652,114,0	0/0:14,0:14:33.11:0,33,428	0/0:21,0:21:63.20:0,63,817	0/0:16,0:16:45.08:0,45,562	0/0:27,0:27:66.20:0,66,843	0/0:16,0:16:45.15:0,45,583	0/0:19,0:19:51.15:0,51,647	0/0:17,0:17:39.11:0,39,492	0/0:19,0:19:42.14:0,42,545	0/0:16,0:16:39.13:0,39,506	0/0:11,0:11:33.11:0,33,428	0/0:18,0:18:54.18:0,54,700	0/0:22,0:22:63.19:0,63,797	0/0:17,0:17:51.16:0,51,650	0/0:18,0:18:51.17:0,51,662	0/0:17,0:17:48.16:0,48,623	0/0:17,0:17:45.15:0,45,584	0/0:15,0:15:24.08:0,24,312	0/0:26,0:26:78.25:0,78,1013	0/0:22,0:22:50.97:0,51,662	0/0:6,0:6:18.06:0,18,234
chr10	68934412	.	TGCCAGCA	T	917.87	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.454;DP=734;FS=5.697;HRun=0;HaplotypeScore=165.0892;InbreedingCoeff=0.9975;MQ=81.63;MQ0=0;MQRankSum=-6.127;QD=45.89;ReadPosRankSum=-1.423;VQSLOD=2.9972;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,129,4956	0/0:11,0:11:33.11:0,33,1292	0/0:21,0:21:51.17:0,51,1790	0/0:22,0:22:60.20:0,60,1774	0/0:15,0:15:42.14:0,42,1605	0/0:18,0:18:48.15:0,48,1825	0/0:23,0:23:69.24:0,69,2677	1/1:6,14:20:39.11:1013,39,0	0/0:30,0:30:87.30:0,87,3449	0/0:35,0:35:99:0,105,4079	0/0:16,0:16:48.16:0,48,1871	0/0:39,0:39:99:0,117,4506	0/0:34,0:34:96.33:0,96,3819	0/0:49,0:49:99:0,141,5506	0/0:22,0:22:66.21:0,66,2454	0/0:32,0:32:96.33:0,96,3769	0/0:43,0:43:99:0,126,4980	0/0:27,0:27:78.27:0,78,3120	0/0:19,0:19:54.17:0,54,1968	0/0:16,0:16:48.16:0,48,1847	0/0:55,0:55:99:0,163,6362	0/0:16,0:16:42.14:0,42,1679	0/0:14,0:14:42.14:0,42,1648	0/0:30,0:30:87.30:0,87,3444	0/0:22,0:21:66.20:0,66,2535	0/0:35,0:35:99:0,102,3895	0/0:19,0:19:57.20:0,57,2215	0/0:8,0:8:24.08:0,24,811
chr10	68935142	.	GCT	G	670.34	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.431;DP=539;FS=16.062;HRun=0;HaplotypeScore=75.6681;InbreedingCoeff=0.9838;MQ=81.63;MQ0=0;MQRankSum=-7.314;QD=24.83;ReadPosRankSum=0.985;VQSLOD=3.2893;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,102,1923	0/0:6,0:6:18.05:0,18,328	0/0:16,0:16:33.10:0,33,591	0/0:14,0:14:14.50:0,14,340	0/0:20,0:20:57.13:0,57,1024	0/0:27,0:27:81.26:0,81,1607	0/0:25,0:25:75.22:0,75,1414	1/1:0,11:11:33.09:375,33,0	0/0:13,0:13:39.12:0,39,754	0/0:28,0:28:84.28:0,84,1639	0/0:14,0:14:41.86:0,42,746	0/0:20,0:20:60.19:0,60,1182	0/0:22,0:22:63.20:0,63,1231	0/0:21,0:21:63.11:0,63,1208	0/0:20,0:20:60.21:0,60,1207	0/0:16,0:16:48.15:0,48,927	0/0:31,0:31:90.27:0,90,1752	1/1:0,13:16:39.02:417,39,0	0/0:25,0:25:75.24:0,75,1424	0/0:18,0:18:54.16:0,54,1024	0/0:31,0:31:87.28:0,87,1714	0/0:13,0:13:36.11:0,36,683	0/0:11,0:11:27.09:0,27,540	0/0:21,0:21:63.22:0,63,1278	0/0:20,0:20:60.21:0,60,1218	0/0:21,0:20:57.16:0,57,1016	0/0:17,0:16:51.16:0,51,997	0/0:7,0:7:21.06:0,21,389
chr10	68935149	.	ATACTTGT	A	1414.90	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.250;DP=546;FS=12.414;HRun=0;HaplotypeScore=131.9750;InbreedingCoeff=0.9931;MQ=84.37;MQ0=0;MQRankSum=-8.146;QD=58.95;ReadPosRankSum=1.763;VQSLOD=3.0522;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,105,4222	0/0:6,0:6:18.06:0,18,755	0/0:17,0:17:45.15:0,45,1521	0/0:18,0:18:35.67:0,36,956	0/0:20,0:20:60.21:0,60,2346	0/0:28,0:28:84.29:0,84,3436	0/0:23,0:23:69.24:0,69,2866	1/1:0,11:11:33.11:727,33,0	0/0:14,0:14:42.14:0,42,1638	0/0:26,0:26:78.27:0,78,3216	0/0:13,0:13:39.13:0,39,1625	0/0:20,0:20:60.21:0,60,2475	0/0:24,0:24:69.24:0,69,2656	0/0:21,0:21:63.22:0,63,2591	0/0:20,0:20:60.21:0,60,2519	0/0:16,0:16:48.16:0,48,2015	0/0:33,0:33:99:0,99,4085	1/1:0,13:13:38.96:810,39,0	0/0:23,0:23:69.24:0,69,2775	0/0:16,0:16:48.16:0,48,1843	0/0:32,0:32:90.31:0,90,3578	0/0:11,0:11:33.10:0,33,1200	0/0:12,0:12:30.10:0,30,1233	0/0:24,0:24:72.25:0,72,2889	0/0:23,0:23:69.24:0,69,2835	0/0:19,0:18:51.17:0,51,2005	0/0:20,0:19:60.21:0,60,2302	0/0:7,0:7:21.07:0,21,873
chr10	68935476	.	AT	A	1166.83	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.758;DP=647;FS=5.574;HRun=1;HaplotypeScore=62.0945;InbreedingCoeff=0.9947;MQ=76.86;MQ0=0;MQRankSum=-0.145;QD=37.64;ReadPosRankSum=-3.998;VQSLOD=2.3180;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,105,1590	0/0:8,0:8:24.08:0,24,372	0/0:19,0:19:40.07:0,40,554	0/0:8,0:8:23.96:0,24,286	0/0:27,0:27:81.26:0,81,1240	0/0:35,0:35:99:0,105,1639	0/0:23,0:23:69.16:0,69,965	1/1:0,31:31:93.28:1262,93,0	0/0:14,0:14:42.11:0,42,609	0/0:27,0:27:81.23:0,81,1204	0/0:23,0:23:69.21:0,69,1031	0/0:22,0:22:66.20:0,66,985	0/0:36,0:36:99:0,108,1618	0/0:26,0:26:78.27:0,78,1218	0/0:25,0:25:75.24:0,75,1148	0/0:31,0:31:93.30:0,93,1430	0/0:30,0:30:90.27:0,90,1354	0/0:23,0:23:69.23:0,69,1079	0/0:13,0:13:39.10:0,39,548	0/0:21,0:21:63.21:0,63,981	0/0:29,0:29:84.08:0,84,1188	0/0:20,0:20:60.18:0,60,892	0/0:26,0:26:78.21:0,78,1124	0/0:14,0:14:42.14:0,42,641	0/0:22,0:22:66.19:0,66,987	0/0:29,0:29:84.21:0,84,1246	0/0:20,0:20:60.20:0,60,937	0/0:9,0:9:27.09:0,27,422
chr10	68937098	.	G	GCACA	1395.88	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.707;DP=681;FS=2.953;HRun=0;HaplotypeScore=126.2532;InbreedingCoeff=0.9959;MQ=80.92;MQ0=0;MQRankSum=-5.666;QD=66.47;ReadPosRankSum=-3.007;VQSLOD=4.5106;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:96.31:0,96,1955	0/0:8,0:7:21.07:0,21,426	0/0:18,0:18:40.89:0,41,802	0/0:23,0:23:57.12:0,57,961	0/0:20,0:20:54.17:0,54,1093	0/0:27,0:27:81.28:0,81,1699	0/0:21,0:21:60.21:0,60,1229	1/1:3,18:21:59.40:1491,59,0	0/0:25,0:25:75.24:0,75,1482	0/0:28,0:28:81.27:0,81,1639	0/0:28,0:28:84.28:0,84,1687	0/0:34,0:34:99:0,102,2132	0/0:25,0:25:75.26:0,75,1538	0/0:18,0:18:54.19:0,54,1133	0/0:33,0:33:99:0,99,1948	0/0:29,0:29:87.30:0,87,1792	0/0:26,0:26:78.27:0,78,1635	0/0:20,0:20:60.21:0,60,1254	0/0:16,0:16:45.15:0,45,944	0/0:25,0:25:75.26:0,75,1561	0/0:45,0:45:99:0,126,2572	0/0:17,0:17:51.17:0,51,1052	0/0:18,0:18:54.19:0,54,1132	0/0:23,0:23:69.19:0,69,1400	0/0:27,0:27:81.23:0,81,1618	0/0:21,0:21:63.21:0,63,1272	0/0:37,0:37:99:0,108,2225	0/0:13,0:13:39.13:0,39,813
chr10	68937486	.	G	GT	12328.28	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=9.856;DP=616;FS=2.942;HRun=7;HaplotypeScore=86.1118;InbreedingCoeff=0.9946;MQ=79.13;MQ0=0;MQRankSum=-2.775;QD=28.80;ReadPosRankSum=2.564;VQSLOD=5.3334;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,111,1058	1/1:0,11:11:33.02:379,33,0	0/0:17,0:17:38:0,38,328	0/0:17,0:16:38.71:0,39,340	0/0:20,0:20:60.10:0,60,579	1/1:5,18:23:45.14:542,45,0	1/1:2,19:21:48.15:580,48,0	1/1:4,24:28:72.17:822,72,0	1/1:1,18:19:48.15:579,48,0	0/0:21,0:21:57.07:0,57,543	0/0:23,0:23:57.09:0,57,550	1/1:0,24:24:69.21:834,69,0	1/1:4,17:21:48.14:569,48,0	1/1:3,20:23:11.66:571,12,0	1/1:4,25:29:51.16:614,51,0	1/1:1,28:29:78.24:942,78,0	1/1:2,25:27:57.17:689,57,0	0/0:18,0:18:48.05:0,48,455	1/1:2,21:23:63.18:750,63,0	1/1:4,20:24:60.02:657,60,0	1/1:1,14:15:39.12:471,39,0	1/1:1,18:19:51:574,51,0	0/0:20,0:20:60.08:0,60,573	0/0:15,0:15:45.03:0,45,421	1/1:2,29:31:62.87:924,63,0	1/1:1,21:22:63.17:748,63,0	1/1:4,22:26:60.02:721,60,0	1/1:1,11:12:30.09:362,30,0
chr10	68937947	.	AT	A	4851.09	PASS	AB=0.824;AC=40;AF=0.714;AN=56;BaseQRankSum=10.264;DP=479;FS=0.000;HRun=13;HaplotypeScore=82.5517;InbreedingCoeff=0.7993;MQ=79.65;MQ0=0;MQRankSum=-0.450;QD=13.40;ReadPosRankSum=1.831;VQSLOD=5.2041;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:14:23.86:0,24,214	1/1:1,8:9:23.86:175,24,0	0/0:15,0:14:6.58:0,7,78	0/1:18,0:14:9.55:10,0,66	0/0:21,0:21:51.02:0,51,485	1/1:0,13:13:38.78:285,39,0	1/1:4,9:13:23.84:175,24,0	1/1:10,23:34:67.60:485,68,0	1/1:4,18:22:50.67:372,51,0	0/0:18,0:18:44.98:0,45,421	0/0:22,2:24:53.32:0,53,496	1/1:4,13:18:40.75:286,41,0	1/1:5,14:20:17.57:283,18,0	1/1:6,10:16:29.79:219,30,0	1/1:2,8:11:22.89:159,23,0	1/1:3,17:20:50.67:372,51,0	1/1:1,14:15:41.76:306,42,0	1/1:1,0:14:22.41:66,22,0	1/1:11,6:19:21.91:143,22,0	1/1:7,12:20:37.78:268,38,0	1/1:2,6:8:17.89:131,18,0	1/1:4,12:16:11.64:217,12,0	0/0:13,0:14:26.87:0,27,243	0/0:10,0:10:24.04:0,24,233	1/1:5,13:20:16.65:267,17,0	0/1:11,12:24:66.98:219,0,67	1/1:4,15:19:11.67:239,12,0	1/1:5,8:13:23.85:175,24,0
chr10	68938224	.	TA	T	7902.97	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=12.573;DP=568;FS=9.569;HRun=11;HaplotypeScore=85.4202;InbreedingCoeff=0.9566;MQ=72.01;MQ0=2;MQRankSum=-1.161;QD=19.37;ReadPosRankSum=5.049;VQSLOD=5.1556;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:23:56.95:0,57,575	1/1:0,6:6:14.98:123,15,0	0/0:12,0:11:12.75:0,13,127	0/0:8,0:8:9.02:0,9,92	0/0:37,0:39:96.01:0,96,964	1/1:0,21:21:59.93:493,60,0	1/1:1,7:8:17.98:148,18,0	1/1:2,21:23:62.89:511,63,0	1/1:2,16:18:44.95:369,45,0	0/0:23,0:23:51.11:0,51,531	0/0:16,1:17:15.20:0,15,325	1/1:6,12:18:4.94:197,5,0	1/1:4,28:32:80.90:665,81,0	1/1:3,18:21:50.93:419,51,0	1/1:2,11:13:32.95:271,33,0	1/1:1,20:21:53.94:443,54,0	1/1:3,11:14:29.96:246,30,0	1/1:4,19:23:50.92:418,51,0	1/1:4,21:25:59.73:479,60,0	1/1:2,32:34:54.95:658,55,0	1/1:1,8:8:17.98:148,18,0	1/1:2,18:20:53.36:442,53,0	0/0:21,0:21:39.50:0,40,516	0/0:17,0:17:42.11:0,42,448	1/1:7,23:30:62.89:517,63,0	1/1:7,23:31:67.92:545,68,0	1/1:2,22:24:62.91:517,63,0	1/1:1,16:17:35.96:296,36,0
chr10	68939142	.	G	GTGTA	16466.39	PASS	AB=0.726;AC=35;AF=0.625;AN=56;BaseQRankSum=-10.856;DP=802;FS=6.060;HRun=0;HaplotypeScore=107.5126;InbreedingCoeff=0.6102;MQ=56.97;MQ0=13;MQRankSum=1.035;QD=29.72;ReadPosRankSum=10.667;VQSLOD=3.1761;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,107,1289	1/1:1,9:11:17.99:484,18,0	0/0:36,0:18:34.86:0,35,311	0/0:29,0:11:23.98:0,24,219	0/0:22,0:22:51.01:0,51,598	0/1:4,24:28:6.92:709,0,7	0/1:2,13:17:28.51:152,0,29	0/0:31,0:31:46.73:0,47,450	1/1:5,23:29:39.08:930,39,0	0/0:22,0:21:28.38:0,28,445	0/1:24,0:21:28.94:29,0,37	1/1:6,29:37:30.07:733,30,0	1/1:2,23:29:47.16:1163,47,0	1/1:3,34:39:42.12:1061,42,0	1/1:2,32:38:60.11:1491,60,0	0/1:7,24:32:32.95:937,0,33	1/1:2,23:24:29.57:976,30,0	0/1:8,0:8:59.31:59,0,64	1/1:7,18:25:36.52:781,37,0	1/1:1,25:29:45.12:1105,45,0	1/1:5,40:49:27.13:896,27,0	1/1:1,26:29:54.09:1230,54,0	0/0:24,0:24:60.10:0,60,845	0/0:38,0:38:99:0,105,1299	1/1:2,20:23:4.27:542,4,0	1/1:7,21:32:68.33:1454,68,0	1/1:2,23:30:28.98:878,29,0	1/1:0,16:17:33.11:855,33,0
chr10	68939144	.	G	GTA	7474.18	PASS	AB=0.990;AC=35;AF=0.625;AN=56;BaseQRankSum=10.355;DP=788;FS=2.937;HRun=0;HaplotypeScore=117.7493;InbreedingCoeff=0.7173;MQ=56.70;MQ0=12;MQRankSum=3.909;QD=13.89;ReadPosRankSum=12.427;VQSLOD=3.0796;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,111,1147	1/1:12,0:12:17.74:198,18,0	0/0:35,0:20:40.95:0,41,399	0/0:29,0:11:29.98:0,30,276	0/0:19,0:19:53.97:0,54,542	1/1:28,1:29:4.33:350,4,0	1/1:17,0:16:4.09:63,4,0	0/0:27,0:27:77.45:0,77,596	1/1:26,3:29:19.15:457,19,0	0/0:22,0:21:53.64:0,54,455	0/1:24,0:21:9.45:9,0,42	1/1:34,1:35:8.13:320,8,0	1/1:29,1:30:26.19:501,26,0	1/1:37,1:39:42.12:505,42,0	1/1:36,1:37:60.16:686,60,0	0/1:32,1:33:25.75:402,0,26	1/1:26,0:25:29.57:441,30,0	0/0:8,0:8:11.78:0,12,81	0/1:25,0:23:42.83:372,0,43	1/1:27,0:27:44.49:495,44,0	1/1:48,0:48:13.08:357,13,0	1/1:28,1:29:53.10:595,53,0	0/0:25,0:25:60.03:0,60,697	0/0:39,0:39:99:0,111,1180	1/1:22,0:22:15.08:245,15,0	1/1:26,3:29:18.50:730,19,0	1/1:30,0:30:29.09:367,29,0	1/1:17,0:17:33.09:381,33,0
chr10	68939467	.	A	AT	10019.23	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=-14.500;DP=548;FS=4.102;HRun=7;HaplotypeScore=47.8713;InbreedingCoeff=0.9880;MQ=66.94;MQ0=1;MQRankSum=1.295;QD=30.00;ReadPosRankSum=2.544;VQSLOD=5.2690;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:72.11:0,72,695	1/1:0,6:6:9.03:109,9,0	0/0:13,0:9:15.02:0,15,145	0/0:13,0:12:27.69:0,28,227	0/0:25,0:25:63.09:0,63,608	1/1:1,23:24:63.19:761,63,0	1/1:1,11:12:30.09:362,30,0	0/0:37,0:37:99:0,102,985	1/1:2,15:17:45.14:544,45,0	0/0:18,0:18:51.08:0,51,492	0/0:21,0:20:45.04:0,45,426	1/1:1,12:13:36.11:435,36,0	1/1:0,17:17:48.15:580,48,0	1/1:3,19:22:51.16:616,51,0	1/1:3,19:22:57.17:689,57,0	1/1:6,22:28:57.17:689,57,0	1/1:1,13:14:36.11:435,36,0	0/0:15,0:15:28.55:0,29,363	1/1:3,12:15:36.07:409,36,0	1/1:2,24:26:69.18:816,69,0	1/1:0,13:13:36.11:435,36,0	1/1:1,17:18:51.16:616,51,0	0/0:22,0:22:57.09:0,57,550	0/0:24,0:24:63.01:0,63,586	1/1:0,20:20:45.14:544,45,0	1/1:0,24:24:72.20:857,72,0	1/1:5,28:33:72.22:870,72,0	1/1:3,7:10:21.06:254,21,0
chr10	68940599	.	ACTT	A	455.09	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.546;DP=721;FS=1.116;HRun=0;HaplotypeScore=99.5835;InbreedingCoeff=0.9134;MQ=90.75;MQ0=0;MQRankSum=-2.732;QD=35.01;ReadPosRankSum=0.301;VQSLOD=4.3407;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,138,3110	0/0:12,0:12:36.12:0,36,815	0/0:41,0:41:99:0,99,2003	0/0:18,0:16:8.60:0,9,687	0/0:15,0:15:42.14:0,42,951	0/0:17,0:17:51.18:0,51,1156	0/0:31,0:31:93.32:0,93,2108	0/0:35,0:35:99:0,102,2271	0/0:19,0:19:54.19:0,54,1224	0/0:29,0:28:81.28:0,81,1820	0/0:13,0:13:39.13:0,39,883	0/0:28,0:28:81.28:0,81,1834	0/0:30,0:30:84.23:0,84,1835	0/0:25,0:25:69.24:0,69,1541	0/0:42,0:42:99:0,123,2750	0/0:27,0:27:75.26:0,75,1698	0/0:36,0:36:99:0,105,2380	1/1:1,12:13:33.11:550,33,0	0/0:12,0:12:36.12:0,36,805	0/0:26,0:26:75.24:0,75,1628	0/0:40,0:40:99:0,120,2717	0/0:16,0:16:48.16:0,48,1086	0/0:16,0:16:48.15:0,48,1011	0/0:42,0:42:99:0,123,2787	0/0:34,0:34:93.32:0,93,2087	0/0:26,0:26:75.26:0,75,1700	0/0:28,0:28:78.27:0,78,1743	0/0:4,0:4:12.04:0,12,272
chr10	68941808	.	CT	C	20668.66	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=14.712;DP=823;FS=1.493;HRun=1;HaplotypeScore=84.7343;InbreedingCoeff=0.9997;MQ=88.21;MQ0=0;MQRankSum=-4.192;QD=38.78;ReadPosRankSum=5.347;VQSLOD=5.2141;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,138,2176	1/1:0,11:11:27.05:356,27,0	0/0:29,0:29:84.26:0,84,1285	0/0:28,0:28:84.29:0,84,1337	0/0:24,0:24:72.25:0,72,1151	1/1:0,26:26:78.26:1091,78,0	1/1:0,27:27:69.23:965,69,0	0/0:37,0:37:99:0,108,1622	1/1:0,35:35:87.29:1212,87,0	0/0:35,0:35:99:0,102,1610	0/0:26,0:26:72.19:0,72,1122	1/1:0,21:21:57.19:797,57,0	1/1:1,48:49:99:1888,135,0	1/1:0,29:29:75.25:1048,75,0	1/1:1,53:53:99:2224,160,0	1/1:0,42:42:99:1594,114,0	1/1:0,20:20:60.16:817,60,0	0/0:17,0:17:48.09:0,48,713	1/1:0,21:21:63.20:860,63,0	1/1:0,29:29:84.24:1153,84,0	1/1:0,35:35:96.32:1342,96,0	1/1:0,22:22:66.22:923,66,0	0/0:24,0:24:66.22:0,66,1046	0/0:24,0:24:72.23:0,72,1126	1/1:0,33:33:90.30:1259,90,0	1/1:0,29:29:87.29:1212,87,0	1/1:0,41:41:99:1552,111,0	1/1:0,9:9:27.09:378,27,0
chr10	68942835	.	C	CAT	17140.69	PASS	AB=0.520;AC=35;AF=0.625;AN=56;BaseQRankSum=9.284;DP=532;FS=2.929;HRun=0;HaplotypeScore=80.8425;InbreedingCoeff=0.9273;MQ=83.54;MQ0=0;MQRankSum=-4.121;QD=52.10;ReadPosRankSum=5.765;VQSLOD=5.8888;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:78.22:0,78,1243	1/1:0,6:6:15.05:305,15,0	0/0:17,0:17:51.17:0,51,802	0/0:17,0:17:48.05:0,48,683	0/0:22,0:22:60.20:0,60,972	1/1:1,19:23:66.23:1328,66,0	1/1:0,13:15:39.13:792,39,0	0/0:20,0:20:57.15:0,57,869	1/1:2,17:19:48.16:968,48,0	0/0:19,0:19:51.17:0,51,822	0/0:14,0:14:39.13:0,39,635	1/1:1,16:18:48.14:934,48,0	1/1:0,23:23:69.24:1398,69,0	1/1:1,22:23:63.22:1280,63,0	1/1:0,17:18:45.15:914,45,0	1/1:0,15:15:45.15:914,45,0	1/1:1,29:31:63.22:1280,63,0	0/0:31,0:31:90.31:0,90,1462	1/1:1,20:19:51.18:1036,51,0	1/1:0,18:18:45.15:914,45,0	1/1:1,27:28:72.25:1463,72,0	1/1:0,10:11:27.09:548,27,0	0/0:11,0:11:30.06:0,30,458	0/0:21,0:21:63.17:0,63,989	1/1:0,21:22:48.16:974,48,0	0/1:1,12:13:9.77:692,0,10	1/1:1,17:18:51.18:1036,51,0	1/1:0,6:6:18.06:366,18,0
chr10	68945457	.	G	GTTT	470.72	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=4.870;DP=458;FS=0.000;HRun=11;HaplotypeScore=67.4856;InbreedingCoeff=0.6405;MQ=75.41;MQ0=1;MQRankSum=0.314;QD=15.69;ReadPosRankSum=-1.379;VQSLOD=1.1555;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:27.02:0,27,305	0/0:4,0:4:12.04:0,12,140	0/0:19,0:16:19.48:0,19,200	0/1:9,0:9:0.01:0,0,76	0/0:28,0:29:70.61:0,71,821	0/0:21,0:21:5.98:0,6,484	0/0:11,0:11:27.04:0,27,315	0/0:29,0:31:69.42:0,69,786	0/0:14,0:14:36.06:0,36,421	0/0:20,0:21:46.65:0,47,558	0/0:18,0:18:51.13:0,51,596	0/0:13,0:13:36.10:0,36,421	0/0:24,0:25:49.54:0,50,576	0/0:9,0:9:24.05:0,24,279	0/0:14,0:16:34.61:0,35,418	0/0:12,0:13:36.02:0,36,403	0/0:22,0:22:54.13:0,54,630	1/1:6,15:21:30.10:565,30,0	0/0:12,0:16:15.59:0,16,366	0/0:17,0:17:42.07:0,42,491	0/0:2,0:2:6.02:0,6,70	0/0:13,0:13:39.12:0,39,456	0/0:16,0:16:33.03:0,33,386	0/0:12,0:12:36.11:0,36,421	0/0:9,0:9:24.06:0,24,281	0/0:21,0:21:60.15:0,60,691	0/0:38,0:39:88.34:0,88,1229	0/0:6,0:6:18.05:0,18,210
chr10	68947144	.	A	ATT	14944.93	PASS	AB=1.000;AC=39;AF=0.696;AN=56;BaseQRankSum=-4.621;DP=678;FS=3.965;HRun=9;HaplotypeScore=91.1853;InbreedingCoeff=0.9028;MQ=77.59;MQ0=0;MQRankSum=-0.064;QD=31.20;ReadPosRankSum=0.216;VQSLOD=5.0577;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,117,1212	1/1:1,11:12:27.09:416,27,0	0/1:16,0:18:15.40:15,0,256	0/0:13,0:14:9.22:0,9,91	0/0:28,0:28:69.13:0,69,734	1/1:4,24:30:72.24:1107,72,0	1/1:5,13:20:35.09:479,35,0	1/1:12,0:33:47.53:176,48,0	1/1:1,11:13:27.05:389,27,0	0/0:38,0:38:96.18:0,96,1011	0/0:19,0:19:45.08:0,45,479	1/1:1,22:24:62.57:932,63,0	1/1:5,13:19:47.60:670,48,0	1/1:2,13:18:41.62:592,42,0	1/1:5,23:31:56.60:840,57,0	1/1:2,19:25:58.66:811,59,0	1/1:3,21:25:59.68:868,60,0	0/0:6,0:6:12.02:0,12,128	1/1:5,18:27:65.16:881,65,0	1/1:1,27:32:92.24:1280,92,0	1/1:10,18:29:75.23:1084,75,0	1/1:2,16:19:47.61:675,48,0	0/0:23,0:25:47.99:0,48,621	0/0:23,0:23:60.06:0,60,614	1/1:4,21:29:67.68:932,68,0	1/1:3,24:30:80.67:1108,81,0	1/1:3,30:33:86.93:1339,87,0	1/1:3,7:11:24.08:351,24,0
chr10	68947639	.	T	TA	7614.45	PASS	AB=0.577;AC=35;AF=0.625;AN=56;BaseQRankSum=9.976;DP=525;FS=5.034;HRun=8;HaplotypeScore=69.7908;InbreedingCoeff=0.8787;MQ=71.76;MQ0=6;MQRankSum=-1.204;QD=27.39;ReadPosRankSum=2.681;VQSLOD=5.6736;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:62.95:0,63,565	1/1:0,9:9:24.07:277,24,0	0/0:26,0:14:20.01:0,20,143	0/0:34,1:13:10.49:0,10,86	0/0:32,0:32:90.05:0,90,824	1/1:1,14:15:42.12:485,42,0	1/1:2,12:14:33.10:381,33,0	0/0:37,0:37:81.01:0,81,733	1/1:2,9:11:30.07:335,30,0	0/0:24,0:24:69.04:0,69,631	0/0:28,0:28:84.05:0,84,769	1/1:2,13:15:36.11:416,36,0	1/1:3,15:18:45.13:519,45,0	1/1:3,15:18:36.11:416,36,0	1/1:1,18:19:39.12:450,39,0	1/1:0,16:15:42.12:485,42,0	1/1:3,26:29:69.21:796,69,0	0/0:16,0:15:39.01:0,39,353	1/1:4,18:20:54.16:623,54,0	1/1:2,12:14:33.06:366,33,0	1/1:0,6:6:12.04:138,12,0	1/1:1,4:5:9.03:101,9,0	0/0:9,0:9:27.01:0,27,247	0/0:16,0:16:42:0,42,379	1/1:2,21:23:57.17:658,57,0	0/1:4,11:15:40.28:339,0,40	1/1:1,27:28:69.20:796,69,0	1/1:0,1:1:3.01:35,3,0
chr10	68947655	.	C	CA	276.24	PASS	AB=0.979;AC=3;AF=0.054;AN=56;BaseQRankSum=-1.852;DP=551;FS=2.170;HRun=8;HaplotypeScore=101.3476;InbreedingCoeff=0.5731;MQ=68.58;MQ0=9;MQRankSum=1.436;QD=4.53;ReadPosRankSum=-0.362;VQSLOD=0.4831;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:59.98:0,60,542	0/0:10,0:10:27.01:0,27,247	0/0:25,0:11:17.77:0,18,144	0/1:45,0:18:15.85:36,0,16	0/0:31,0:31:84.04:0,84,768	0/0:18,0:18:48.01:0,48,435	0/0:14,0:14:36.01:0,36,329	0/0:38,0:38:90.02:0,90,820	0/0:12,0:12:27.01:0,27,246	0/0:20,0:20:54.03:0,54,493	0/0:27,0:27:78.04:0,78,714	0/0:14,0:14:33:0,33,302	0/0:17,0:17:48.01:0,48,434	0/0:18,0:18:48.02:0,48,438	0/0:18,0:18:36.02:0,36,329	0/0:20,0:19:54.03:0,54,493	0/0:31,0:31:67.60:0,68,699	1/1:2,12:13:30.09:346,30,0	0/0:25,0:23:50.94:0,51,456	0/0:16,0:16:45:0,45,408	0/0:7,0:7:12:0,12,110	0/0:3,0:3:5.98:0,6,55	0/0:12,0:12:33.02:0,33,302	0/0:20,0:20:54.03:0,54,494	0/0:24,0:23:57.01:0,57,521	0/0:16,0:15:39.01:0,39,353	0/0:27,0:27:65.90:0,66,589	0/0:3,0:3:8.99:0,9,77
chr10	68948457	.	C	CT	442.06	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.941;DP=604;FS=0.000;HRun=0;HaplotypeScore=148.8481;InbreedingCoeff=0.9887;MQ=68.02;MQ0=11;MQRankSum=-0.388;QD=29.47;ReadPosRankSum=3.149;VQSLOD=3.3490;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,106,1446	0/0:8,0:8:18.06:0,18,251	0/0:26,0:15:43.80:0,44,538	0/0:40,0:24:40.81:0,41,670	0/0:27,0:27:72.17:0,72,949	0/0:17,0:17:39.04:0,39,498	0/0:26,0:26:54.47:0,54,656	0/0:29,0:28:84.19:0,84,1043	0/0:19,0:19:42.10:0,42,562	0/0:14,0:14:38.92:0,39,516	0/0:16,0:16:27.09:0,27,376	0/0:19,0:20:36.12:0,36,501	0/0:31,0:31:66.18:0,66,894	0/0:24,0:24:54.18:0,54,751	0/0:28,0:28:57.19:0,57,789	0/0:19,0:19:45.15:0,45,626	0/0:16,0:16:45:0,45,540	1/1:0,15:15:36.12:537,36,0	0/0:13,0:13:39.06:0,39,459	0/0:12,0:12:30.10:0,30,418	0/0:25,0:25:48.01:0,48,646	0/0:13,0:13:27.06:0,27,361	0/0:19,0:19:54.17:0,54,730	0/0:20,0:20:51.25:0,51,624	0/0:22,0:22:39.09:0,39,521	0/0:23,0:23:63.21:0,63,876	0/0:27,0:27:72.24:0,72,1001	0/0:11,0:11:33.11:0,33,459
chr10	68948470	.	CAG	C	477.85	PASS	AB=0.948;AC=27;AF=0.675;AN=40;BaseQRankSum=7.019;DP=588;FS=3.834;HRun=0;HaplotypeScore=155.4281;InbreedingCoeff=0.3966;MQ=56.02;MQ0=14;MQRankSum=-4.800;QD=1.29;ReadPosRankSum=2.476;VQSLOD=2.7354;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:45,0:45:35.77:36,0,374	./.	./.	./.	0/1:24,2:26:8.16:8,0,249	1/1:18,0:18:8.52:42,9,0	./.	0/0:31,0:29:8.86:0,9,57	1/1:19,0:19:17.04:84,17,0	0/0:18,0:18:32.30:0,32,272	0/0:14,0:14:6.01:0,6,67	1/1:24,0:24:8.48:42,8,0	1/1:31,0:31:14.18:70,14,0	1/1:24,0:24:11.36:56,11,0	1/1:31,0:30:5.63:28,6,0	1/1:21,0:21:8.52:42,9,0	1/1:21,0:21:4.61:18,5,0	./.	1/1:14,0:14:2.84:14,3,0	./.	0/0:23,0:23:0:0,0,0	./.	0/0:16,0:16:9.03:0,9,124	0/1:20,2:22:39.76:40,0,238	1/1:22,0:22:8.52:42,9,0	1/1:26,0:26:2.43:14,2,0	1/1:27,0:27:17.04:84,17,0	./.
chr10	68948489	.	AGAGAGAGAGAGAGAGAGAGAGAGAGCGAGCGAGC	A	11574.48	PASS	AC=32;AF=0.640;AN=50;BaseQRankSum=9.856;DP=550;FS=1.786;HRun=0;HaplotypeScore=332.1883;InbreedingCoeff=0.8199;MQ=49.88;MQ0=22;MQRankSum=-4.872;QD=37.22;ReadPosRankSum=3.324;VQSLOD=2.8900;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:45:99:0,108,11163	1/1:5,0:5:3.01:80,3,0	./.	0/0:23,0:4:5.52:0,6,112	0/0:21,0:21:51.18:0,51,6548	1/1:7,13:20:9.03:789,9,0	./.	0/0:29,0:27:57.20:0,57,2988	1/1:9,14:22:18.06:1537,18,0	0/0:21,0:20:57.20:0,57,5346	0/0:18,0:18:27.08:0,27,2791	1/1:9,12:21:9.03:784,9,0	1/1:15,16:31:16.45:1298,16,0	1/1:7,17:24:11.73:1052,12,0	1/1:30,0:28:6.02:406,6,0	1/1:10,17:27:9.92:792,10,0	1/1:5,12:17:6.02:515,6,0	0/0:8,0:8:16.25:0,16,438	1/1:5,16:21:47.01:1040,47,0	1/1:6,0:6:12:124,12,0	1/1:15,0:15:3:25,3,0	./.	0/0:10,0:9:15.05:0,15,1717	0/0:26,0:26:61.47:0,61,6605	1/1:10,12:22:9.03:789,9,0	1/1:9,12:21:29.11:720,29,0	1/1:7,17:24:18.06:1579,18,0	1/1:4,0:4:5.97:45,6,0
chr10	68948491	.	AGAGAGAGAGAGAGAGAGAGAGAGCGAGCGAGC	A	10184.19	PASS	AB=1.000;AC=30;AF=0.600;AN=50;BaseQRankSum=11.378;DP=531;FS=0.552;HRun=0;HaplotypeScore=324.6825;InbreedingCoeff=0.7942;MQ=49.86;MQ0=19;MQRankSum=-5.256;QD=34.41;ReadPosRankSum=4.388;VQSLOD=2.8244;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:45:99:0,108,10601	1/1:5,0:5:3.01:45,3,0	./.	0/0:21,0:6:6.67:0,7,264	0/0:23,0:23:57.20:0,57,6498	1/1:19,0:19:9.03:686,9,0	./.	0/0:29,0:27:66.69:0,67,2608	1/1:22,0:21:18.06:1371,18,0	0/0:21,0:20:57.19:0,57,4890	0/0:17,0:17:27.09:0,27,2770	1/1:20,0:20:9.03:681,9,0	1/1:30,0:30:15.80:1144,16,0	1/1:24,0:24:11.84:913,12,0	1/1:9,20:27:6.02:498,6,0	1/1:24,0:24:9.90:688,10,0	1/1:16,0:16:6.02:446,6,0	0/0:8,0:8:13.29:0,13,313	1/1:20,0:20:47.19:1005,47,0	1/1:6,0:6:3.88:28,4,0	0/1:13,0:13:0:0,0,0	./.	0/0:9,0:8:15.05:0,15,1587	0/0:26,0:26:61.49:0,61,6055	1/1:22,0:22:9.03:685,9,0	1/1:19,0:19:24.08:622,24,0	1/1:23,0:23:18.06:1372,18,0	0/1:4,0:4:0:1,0,0
chr10	68948513	.	AGCGAGC	A	4157.82	PASS	AC=34;AF=0.680;AN=50;BaseQRankSum=10.104;DP=454;FS=14.949;HRun=0;HaplotypeScore=144.2809;InbreedingCoeff=0.8618;MQ=59.88;MQ0=13;MQRankSum=-5.496;QD=16.18;ReadPosRankSum=0.336;VQSLOD=2.2730;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:45:99:0,108,2045	1/1:4,0:4:9.03:125,9,0	0/0:16,0:8:15.90:0,16,278	0/0:24,0:13:16.56:0,17,359	0/0:26,0:27:52.92:0,53,1474	1/1:13,0:13:9.03:126,9,0	1/1:12,0:12:12.04:159,12,0	1/1:4,29:32:84.31:1153,84,0	1/1:17,0:16:18.06:252,18,0	0/0:20,0:20:18.50:0,18,650	0/0:13,0:19:36.08:0,36,674	1/1:13,0:13:8.91:131,9,0	1/1:17,0:17:14.70:210,15,0	1/1:17,0:17:11.73:168,12,0	1/1:21,0:21:5.70:84,6,0	1/1:17,0:17:9.02:126,9,0	1/1:12,0:12:6.02:73,6,0	1/1:10,0:10:30.07:397,30,0	1/1:18,0:17:41.99:459,42,0	./.	1/1:12,0:12:3.01:52,3,0	./.	0/0:10,0:9:21.07:0,21,441	0/0:18,0:19:27.09:0,27,850	1/1:12,0:12:9.03:126,9,0	1/1:12,0:12:21.05:265,21,0	1/1:17,0:17:18.06:252,18,0	./.
chr10	68949763	.	T	TC	14946.62	PASS	AB=0.933;AC=38;AF=0.679;AN=56;BaseQRankSum=10.969;DP=791;FS=6.863;HRun=7;HaplotypeScore=118.2362;InbreedingCoeff=0.8240;MQ=81.32;MQ0=0;MQRankSum=-1.870;QD=25.86;ReadPosRankSum=6.179;VQSLOD=3.6995;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:60.08:0,60,573	1/1:0,17:17:39.12:471,39,0	0/0:34,0:32:16.63:0,17,500	0/1:38,0:36:18.38:18,0,390	0/0:17,0:17:47.44:0,47,442	1/1:2,29:31:66.20:797,66,0	1/1:2,21:23:51.16:616,51,0	0/0:32,0:33:86.13:0,86,802	1/1:4,26:30:66.20:797,66,0	0/0:34,0:34:91.01:0,91,864	0/0:32,0:32:87.09:0,87,825	1/1:3,25:28:24.48:777,24,0	1/1:4,33:37:93.25:1107,93,0	1/1:3,35:38:99:1187,99,0	1/1:2,43:46:94.27:1399,94,0	1/1:2,38:40:96.29:1160,96,0	1/1:4,25:29:14.30:739,14,0	0/1:11,2:13:33.44:33,0,272	1/1:6,10:16:30.07:349,30,0	1/1:5,30:35:52.28:906,52,0	1/1:1,19:20:45.14:543,45,0	1/1:0,36:36:99:1232,102,0	0/0:19,0:19:54.07:0,54,516	0/0:22,0:22:60.03:0,60,554	1/1:2,32:35:78.24:940,78,0	1/1:4,25:29:75.19:861,75,0	1/1:5,29:34:75.23:906,75,0	1/1:0,3:3:9.03:109,9,0
chr10	68950743	.	T	TA	4310.09	PASS	AB=0.929;AC=40;AF=0.714;AN=56;BaseQRankSum=-9.629;DP=310;FS=21.110;HRun=8;HaplotypeScore=31.2212;InbreedingCoeff=0.7075;MQ=70.72;MQ0=3;MQRankSum=0.155;QD=21.23;ReadPosRankSum=3.068;VQSLOD=3.1636;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:24.01:0,24,219	1/1:0,1:1:3.01:34,3,0	0/1:18,0:6:0.80:1,0,16	0/0:15,0:7:6.64:0,7,25	0/0:18,0:18:44.99:0,45,404	1/1:4,14:18:36.10:413,36,0	1/1:0,3:3:6.02:69,6,0	0/0:32,0:32:92.98:0,93,826	1/1:0,3:3:9.03:103,9,0	0/0:18,0:18:42.01:0,42,380	0/0:10,0:10:30:0,30,268	1/1:1,7:8:12.03:137,12,0	1/1:1,5:6:12.03:138,12,0	1/1:2,7:9:15.04:172,15,0	1/1:2,6:8:15.04:172,15,0	1/1:5,5:10:15.04:172,15,0	1/1:2,16:18:45.13:515,45,0	1/1:6,0:6:13.49:60,13,0	1/1:4,19:23:62.49:618,62,0	1/1:2,8:10:21.06:241,21,0	1/1:0,2:2:3.01:34,3,0	1/1:2,4:6:9.03:103,9,0	0/1:5,1:6:25.39:25,0,46	0/0:2,0:2:5.96:0,6,47	1/1:1,6:7:18.05:206,18,0	1/1:2,15:17:6.19:452,6,0	1/1:6,12:18:47.78:506,48,0	1/1:0,6:6:12.03:138,12,0
chr10	68952461	.	ACTCTCT	A	1305.42	PASS	AB=1.000;AC=34;AF=0.680;AN=50;BaseQRankSum=0.646;DP=582;FS=10.492;HRun=0;HaplotypeScore=121.6545;InbreedingCoeff=0.3774;MQ=67.33;MQ0=50;MQRankSum=-0.224;QD=4.96;ReadPosRankSum=0.777;VQSLOD=1.7458;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:14,1:15:5.58:0,6,44	./.	0/0:80,0:25:0.47:0,0,1	0/0:125,0:39:0.47:0,0,1	0/0:21,1:21:1.93:0,2,41	1/1:16,0:16:6.01:68,6,0	./.	0/0:26,0:24:2.04:0,2,6	1/1:13,1:14:5.19:117,5,0	1/1:15,0:15:0.90:38,1,0	0/1:14,0:14:0:0,0,0	1/1:9,0:9:3.01:60,3,0	1/1:9,1:9:8.98:138,9,0	1/1:14,0:13:3.01:59,3,0	1/1:11,3:14:3.45:23,3,0	1/1:10,0:10:3.01:58,3,0	1/1:15,1:15:6.02:118,6,0	0/0:8,0:8:12.04:0,12,290	1/1:11,0:11:6.02:84,6,0	1/1:9,0:10:3.01:42,3,0	0/1:33,0:33:0:0,0,0	1/1:7,0:8:3.01:50,3,0	0/0:12,0:12:0.57:0,1,7	1/1:24,0:28:3.90:61,4,0	1/1:9,1:10:6.02:100,6,0	1/1:17,0:18:18.06:294,18,0	1/1:11,1:10:5.41:115,5,0	./.
chr10	68952528	.	T	TACACAC	6139.31	PASS	AB=0.684;AC=41;AF=0.732;AN=56;BaseQRankSum=0.865;DP=538;FS=4.139;HRun=0;HaplotypeScore=147.0108;InbreedingCoeff=0.7523;MQ=44.47;MQ0=12;MQRankSum=-5.400;QD=17.39;ReadPosRankSum=-4.377;VQSLOD=3.5513;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:20:21.60:0,22,391	1/1:0,2:5:5.62:135,6,0	0/0:31,0:11:8.77:0,9,131	0/0:50,0:8:5.95:0,6,89	0/0:24,0:25:47.95:0,48,920	1/1:12,8:22:17.79:346,18,0	1/1:12,13:26:14.35:359,14,0	1/1:19,0:19:9.87:78,10,0	0/1:7,5:13:3.83:229,0,4	1/1:16,0:22:14.72:265,15,0	1/1:16,1:23:23.67:197,24,0	1/1:5,13:19:12.04:325,12,0	1/1:10,9:20:18.06:577,18,0	1/1:15,0:15:21.07:383,21,0	1/1:7,4:14:15.05:340,15,0	1/1:3,8:12:18.06:505,18,0	1/1:6,5:13:3.01:98,3,0	0/0:9,0:9:3.01:0,3,42	1/1:9,4:13:12.01:187,12,0	1/1:10,7:21:15.27:316,15,0	1/1:17,0:18:8.48:68,8,0	1/1:10,8:20:17.97:366,18,0	0/0:21,0:24:48.04:0,48,914	0/0:24,0:25:38.92:0,39,785	1/1:12,5:18:21.07:499,21,0	1/1:12,2:16:30.07:554,30,0	1/1:11,1:13:9.03:174,9,0	1/1:6,1:7:6.08:137,6,0
chr10	68954934	.	AG	A	9473.32	PASS	AB=1.000;AC=35;AF=0.625;AN=56;BaseQRankSum=3.882;DP=512;FS=7.650;HRun=5;HaplotypeScore=96.5125;InbreedingCoeff=0.9682;MQ=60.03;MQ0=1;MQRankSum=-2.296;QD=29.98;ReadPosRankSum=1.223;VQSLOD=4.9354;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:93.77:0,94,1596	1/1:1,4:5:12.03:136,12,0	0/0:15,0:11:26.50:0,27,298	0/0:10,0:10:24.07:0,24,303	0/0:24,0:24:66.21:0,66,886	1/1:3,11:14:30.08:340,30,0	1/1:6,13:19:50.84:558,51,0	0/0:28,0:28:76.92:0,77,931	1/1:3,11:14:39.11:442,39,0	0/0:13,0:13:36.11:0,36,479	0/0:11,0:11:26.96:0,27,384	1/1:0,19:19:57.16:645,57,0	1/1:2,18:20:60.16:670,60,0	1/1:3,20:23:66.19:744,66,0	1/1:2,14:16:42.12:476,42,0	1/1:2,18:20:57.16:646,57,0	1/1:8,12:20:48.04:506,48,0	0/0:8,0:8:18.06:0,18,246	1/1:2,25:27:72.18:804,72,0	1/1:1,16:17:42.07:460,42,0	1/1:3,26:29:66.64:737,67,0	1/1:2,13:15:42.12:476,42,0	0/0:18,0:18:51.17:0,51,686	0/0:23,0:23:57.19:0,57,778	1/1:0,17:17:51.15:577,51,0	1/1:5,15:20:54.15:611,54,0	1/1:1,19:20:57.16:646,57,0	0/1:1,0:1:0:0,0,0
chr10	68954996	.	A	AT	231.68	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-0.651;DP=549;FS=0.000;HRun=0;HaplotypeScore=146.4489;InbreedingCoeff=0.9603;MQ=78.16;MQ0=0;MQRankSum=-3.421;QD=28.96;ReadPosRankSum=-0.343;VQSLOD=3.0550;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,111,1552	0/0:7,0:7:21.07:0,21,294	0/0:14,0:14:36.10:0,36,464	0/0:20,0:20:38.29:0,38,475	0/0:31,0:31:90.26:0,90,1236	0/0:23,0:23:66.22:0,66,922	0/0:22,0:22:63.21:0,63,881	0/0:25,0:25:75.24:0,75,1019	0/0:19,0:19:54.18:0,54,755	0/0:28,0:28:78.26:0,78,1091	0/0:14,0:14:42.12:0,42,569	0/0:18,0:18:54.18:0,54,755	0/0:22,0:22:63.13:0,63,833	0/0:21,0:21:63.21:0,63,877	0/0:20,0:20:57.13:0,57,758	0/0:18,0:18:54.18:0,54,755	0/0:21,0:21:54.18:0,54,755	1/1:0,8:8:21.07:324,21,0	0/0:9,0:9:24.08:0,24,336	0/0:19,0:19:54.09:0,54,710	0/0:26,0:26:72.24:0,72,1006	0/0:19,0:19:51.17:0,51,713	0/0:15,0:15:39.13:0,39,544	0/0:24,0:24:69.19:0,69,943	0/0:16,0:16:39.13:0,39,545	0/0:23,0:23:69.22:0,69,946	0/0:25,0:24:69.12:0,69,930	0/0:4,0:4:12.04:0,12,168
chr10	68958404	.	TAA	T	2003.77	PASS	AB=0.779;AC=35;AF=0.625;AN=56;BaseQRankSum=0.269;DP=412;FS=21.941;HRun=14;HaplotypeScore=64.5381;InbreedingCoeff=0.5868;MQ=60.10;MQ0=12;MQRankSum=0.517;QD=7.68;ReadPosRankSum=5.297;VQSLOD=-0.2091;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:24:46.34:0,46,399	0/1:4,2:6:7.47:73,0,7	0/0:18,0:5:5.23:0,5,42	0/1:20,0:8:2.73:3,0,111	0/0:16,0:17:26.71:0,27,281	1/1:10,3:15:4.53:113,5,0	1/1:7,4:12:19.38:176,19,0	0/0:17,0:25:44.94:0,45,472	1/1:7,3:10:20.62:177,21,0	0/0:12,0:14:29.49:0,29,296	0/0:14,0:14:26.99:0,27,328	0/1:2,3:5:4.73:22,0,5	1/1:11,4:15:16.70:143,17,0	1/1:7,3:11:7.30:75,7,0	1/1:11,4:14:17.88:161,18,0	1/1:13,4:18:20.88:254,21,0	1/1:16,2:18:26.57:222,27,0	0/1:8,0:15:7.54:8,0,33	1/1:13,7:20:10.81:148,11,0	1/1:7,1:8:5.91:49,6,0	1/1:16,0:17:8.47:53,8,0	1/1:5,1:7:8.71:67,9,0	0/0:12,0:15:18.97:0,19,172	0/0:20,0:22:53.57:0,54,599	1/1:10,1:13:15.07:145,15,0	0/1:10,1:11:27.14:96,0,27	1/1:4,7:12:8.42:68,8,0	1/1:9,0:8:17.96:152,18,0
chr10	68958419	.	G	GGTGTGT	7007.37	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=6.895;DP=471;FS=3.822;HRun=0;HaplotypeScore=155.6118;InbreedingCoeff=0.7412;MQ=50.45;MQ0=16;MQRankSum=-8.909;QD=20.37;ReadPosRankSum=0.904;VQSLOD=4.4117;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:23:30.99:0,31,608	1/1:7,0:6:8.99:134,9,0	0/0:21,0:5:8.96:0,9,130	0/0:27,0:10:9.03:0,9,173	0/0:19,0:20:43.03:0,43,811	1/1:13,0:14:2.90:77,3,0	1/1:17,0:15:5.96:44,6,0	1/1:25,0:24:16.96:224,17,0	1/1:14,0:15:3.01:75,3,0	1/1:8,8:17:24:694,24,0	1/1:12,9:23:18.06:477,18,0	1/1:10,0:10:9.03:233,9,0	1/1:15,0:15:6.02:117,6,0	1/1:13,0:13:3.01:78,3,0	1/1:12,0:11:5.74:50,6,0	1/1:15,0:16:24.08:619,24,0	1/1:17,0:16:15.05:342,15,0	1/1:14,0:13:12:276,12,0	1/1:19,0:19:21.07:527,21,0	1/1:10,0:9:9.03:233,9,0	1/1:21,0:20:18.04:446,18,0	1/1:12,0:12:6.02:155,6,0	0/0:13,0:13:23.77:0,24,475	0/0:21,0:21:33.11:0,33,661	1/1:22,0:22:42.10:917,42,0	1/1:17,0:14:26.03:529,26,0	1/1:18,0:18:26.83:605,27,0	1/1:8,0:7:5.68:154,6,0
chr10	68958446	.	G	GGTGTGTGTGTGTGTA	7079.63	PASS	AB=0.814;AC=25;AF=0.446;AN=56;BaseQRankSum=2.900;DP=515;FS=6.250;HRun=0;HaplotypeScore=189.8289;InbreedingCoeff=-0.1087;MQ=55.56;MQ0=4;MQRankSum=-6.914;QD=19.29;ReadPosRankSum=0.896;VQSLOD=3.4562;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:69.94:0,70,1925	0/1:8,0:7:17.47:336,0,17	0/0:17,0:13:35.49:0,35,714	0/0:20,0:10:26.84:0,27,620	0/0:23,0:23:63.20:0,63,2245	0/1:5,0:20:17.77:119,0,18	0/1:11,0:24:41.85:300,0,42	0/1:24,0:23:99:381,0,615	0/1:12,0:13:40.97:769,0,41	0/0:12,0:12:30.66:0,31,358	0/0:17,0:17:22.46:0,22,224	1/1:0,1:13:9.03:544,9,0	1/1:2,0:17:4.83:192,5,0	0/1:3,0:20:31.96:181,0,32	0/1:6,0:23:20.56:21,0,45	1/1:1,0:25:24.07:1449,24,0	0/1:9,0:24:31.26:509,0,31	0/1:9,0:7:99:138,0,151	0/1:22,0:22:99:198,0,121	0/1:1,0:29:12.72:473,0,13	1/1:20,0:21:10.63:225,11,0	0/1:13,0:12:7.37:18,0,7	0/0:12,0:12:33.02:0,33,1201	0/0:18,0:18:45.09:0,45,1639	0/1:25,0:26:30.56:248,0,31	0/1:14,0:12:64.55:280,0,65	0/1:13,0:15:88.74:321,0,89	1/1:1,0:3:8.98:376,9,0
chr10	68958644	.	TTCTC	T	155.09	PASS	AB=0.894;AC=3;AF=0.058;AN=52;BaseQRankSum=0.124;DP=561;FS=1.450;HRun=0;HaplotypeScore=113.7827;InbreedingCoeff=-0.0707;MQ=60.06;MQ0=13;MQRankSum=2.257;QD=2.93;ReadPosRankSum=-1.583;VQSLOD=2.0226;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:13,1:13:47.26:69,0,47	0/0:13,0:12:2.99:0,3,23	./.	./.	0/1:16,7:24:9.41:173,0,9	0/0:20,0:20:18:0,18,233	0/0:31,0:30:13.29:0,13,206	0/0:51,0:49:13.87:0,14,132	0/0:14,0:14:14.82:0,15,136	0/0:21,0:21:11.32:0,11,141	0/0:22,0:22:5.94:0,6,49	0/0:20,0:20:6.02:0,6,99	0/0:14,0:14:20.01:0,20,222	0/0:12,0:12:6.02:0,6,95	0/0:20,0:18:15.05:0,15,231	0/0:25,0:24:7.84:0,8,96	0/0:19,0:19:29.89:0,30,324	0/0:8,0:8:5.57:0,6,31	0/0:20,0:20:11.06:0,11,148	0/0:21,0:21:9.01:0,9,127	0/0:20,0:20:14.02:0,14,168	0/0:12,0:12:8.99:0,9,142	0/0:26,0:26:0.42:0,0,365	0/1:15,0:15:0.37:0,0,418	0/0:16,0:16:5.94:0,6,76	0/0:20,0:19:35.95:0,36,400	0/0:20,0:20:8.39:0,8,107	0/0:16,0:15:12.03:0,12,164
chr10	68958688	.	C	CTCCCTT	8870.48	PASS	AB=1.000;AC=40;AF=0.714;AN=56;BaseQRankSum=0.202;DP=577;FS=2.662;HRun=0;HaplotypeScore=122.4273;InbreedingCoeff=0.7479;MQ=56.84;MQ0=20;MQRankSum=-1.293;QD=22.74;ReadPosRankSum=-2.102;VQSLOD=4.4077;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:17:40.07:0,40,546	1/1:1,0:10:5.93:40,6,0	0/0:44,0:11:14.78:0,15,230	0/0:50,0:14:35.04:0,35,424	0/0:19,0:19:38.82:0,39,608	1/1:21,0:21:46.70:643,47,0	1/1:32,0:31:72.59:1096,73,0	0/0:26,0:24:43.18:0,43,873	1/1:22,0:22:35.93:767,36,0	0/1:14,0:13:5.25:5,0,437	0/1:12,0:11:9.78:10,0,167	1/1:1,11:17:6.02:148,6,0	1/1:5,8:16:11.84:140,12,0	1/1:13,0:13:33.10:528,33,0	1/1:26,0:25:56.34:852,56,0	1/1:2,17:25:5.05:118,5,0	1/1:21,1:22:24.63:653,25,0	1/1:10,0:9:18.03:235,18,0	1/1:17,0:17:34:559,34,0	1/1:17,0:16:40.38:620,40,0	1/1:14,0:14:27.05:412,27,0	1/1:19,0:19:38.68:541,39,0	0/0:20,0:20:12.10:0,12,464	0/0:10,0:10:29.12:0,29,542	1/1:2,14:24:3.01:91,3,0	1/1:2,17:22:63.03:995,63,0	1/1:2,0:23:6.02:129,6,0	1/1:10,0:9:21.06:288,21,0
chr10	68960498	.	C	CT	520.48	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-6.215;DP=601;FS=0.000;HRun=10;HaplotypeScore=58.2518;InbreedingCoeff=0.9941;MQ=71.26;MQ0=0;MQRankSum=-2.068;QD=19.28;ReadPosRankSum=0.836;VQSLOD=4.2540;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:80.90:0,81,665	0/0:13,0:13:35.96:0,36,296	0/0:11,0:11:29.87:0,30,232	0/0:10,0:10:22.95:0,23,172	0/0:23,0:23:53.92:0,54,443	0/0:26,0:26:68.92:0,69,566	0/0:14,0:14:35.95:0,36,296	0/0:35,0:35:71.87:0,72,589	0/0:17,0:18:46.97:0,47,372	0/0:20,0:21:43.95:0,44,351	0/0:17,0:18:52.98:0,53,424	0/0:20,0:20:50.92:0,51,416	0/0:19,0:19:44.91:0,45,369	0/0:18,0:18:47.93:0,48,394	0/0:26,0:27:73.92:0,74,592	0/0:21,0:20:44.88:0,45,365	0/0:24,0:24:68.92:0,69,566	1/1:4,23:27:38.58:615,39,0	0/0:24,0:24:44.91:0,45,369	0/0:30,1:31:42.87:0,43,555	0/0:17,0:17:38.95:0,39,320	0/0:13,0:14:28.98:0,29,228	0/0:9,0:9:26.95:0,27,218	0/0:20,0:20:56.91:0,57,464	0/0:30,0:30:74.87:0,75,611	0/0:38,0:38:89.86:0,90,739	0/0:31,0:31:68.90:0,69,566	0/0:13,0:13:29.93:0,30,246
chr10	68960763	.	TA	T	489.37	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.087;DP=521;FS=0.670;HRun=10;HaplotypeScore=47.9462;InbreedingCoeff=0.8823;MQ=71.99;MQ0=0;MQRankSum=-0.311;QD=19.57;ReadPosRankSum=0.124;VQSLOD=4.0833;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:48.09:0,48,509	0/0:13,0:13:36.10:0,36,398	0/0:11,0:11:12.02:0,12,125	0/0:8,0:8:13.57:0,14,123	0/0:28,0:29:81.02:0,81,859	0/0:21,0:21:54.11:0,54,574	0/0:12,0:12:12.71:0,13,281	0/0:28,0:28:75.19:0,75,823	0/0:12,0:12:33.09:0,33,365	0/0:25,0:25:66.16:0,66,711	0/0:22,1:23:34.08:0,34,588	0/0:13,1:14:13.04:0,13,364	0/0:10,0:10:27.06:0,27,290	0/0:10,0:10:30.05:0,30,315	0/0:23,0:23:18.22:0,18,496	0/0:15,0:15:39.11:0,39,431	0/0:25,0:25:63.17:0,63,697	1/1:3,22:25:68.66:584,69,0	0/0:16,1:18:20.69:0,21,414	0/0:24,1:26:45.40:0,45,673	0/0:13,0:13:30.08:0,30,332	0/0:14,0:14:18.71:0,19,340	0/0:23,0:23:48.01:0,48,502	0/0:10,0:10:30.06:0,30,322	0/0:20,1:22:36.94:0,37,611	0/0:26,0:26:75.08:0,75,799	0/0:28,0:28:84.23:0,84,929	0/0:16,1:17:19.05:0,19,428
chr10	68962633	.	CA	C	10502.53	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=11.062;DP=676;FS=0.971;HRun=8;HaplotypeScore=68.6884;InbreedingCoeff=0.9991;MQ=72.59;MQ0=0;MQRankSum=-0.891;QD=25.07;ReadPosRankSum=3.328;VQSLOD=5.6550;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:63.17:0,63,738	1/1:1,10:11:30.05:290,30,0	0/0:18,0:18:39.01:0,39,436	0/0:15,0:15:30.08:0,30,336	0/0:38,0:38:99:0,99,1184	1/1:1,26:27:75.12:724,75,0	1/1:1,8:9:21.03:203,21,0	0/0:31,0:31:84.24:0,84,995	1/1:1,12:13:36.06:348,36,0	0/0:40,0:40:99:0,120,1439	0/0:21,0:21:60.18:0,60,715	1/1:4,15:19:45.07:435,45,0	1/1:1,15:16:42.07:406,42,0	1/1:2,20:22:54.09:522,54,0	1/1:4,31:35:81.05:782,81,0	1/1:2,22:24:57.09:550,57,0	1/1:3,17:20:45.07:434,45,0	0/0:23,0:23:66.18:0,66,783	1/1:0,20:20:54.06:511,54,0	1/1:1,25:26:75.12:724,75,0	1/1:2,28:30:81.13:782,81,0	1/1:2,22:24:66.11:637,66,0	0/0:32,0:32:81.25:0,81,979	0/0:15,0:15:36.08:0,36,412	1/1:1,27:28:78.12:753,78,0	1/1:6,36:42:99:1069,111,0	1/1:2,37:39:99:1014,105,0	1/1:1,13:14:33.05:319,33,0
chr10	68962843	.	GCCC	G	20183.93	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=17.527;DP=707;FS=29.288;HRun=4;HaplotypeScore=132.4773;InbreedingCoeff=0.9953;MQ=83.56;MQ0=0;MQRankSum=-7.549;QD=42.94;ReadPosRankSum=6.015;VQSLOD=2.7795;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,108,2463	1/1:0,11:11:29.84:487,30,0	0/0:23,0:23:66.14:0,66,1413	0/0:26,0:26:69.22:0,69,1484	0/0:29,0:29:87.30:0,87,2030	1/1:0,15:15:32.98:498,33,0	1/1:0,21:21:50.93:791,51,0	0/0:27,0:27:81.25:0,81,1723	1/1:1,27:28:66.23:1162,66,0	0/0:29,0:29:83.64:0,84,1805	0/0:19,0:19:57.07:0,57,1185	1/1:0,36:36:96.33:1693,96,0	1/1:0,25:25:66.23:1163,66,0	1/1:1,30:31:78.27:1374,78,0	1/1:0,42:42:99:1762,102,0	1/1:0,38:38:89.98:1413,90,0	1/1:0,26:26:69.24:1201,69,0	0/0:15,0:15:45.14:0,45,1017	1/1:0,15:15:45.15:780,45,0	1/1:0,21:21:57.19:990,57,0	1/1:1,43:44:93.40:1571,93,0	1/1:0,17:17:39.07:652,39,0	0/0:18,0:18:54.17:0,54,1195	0/0:14,0:14:42.13:0,42,946	1/1:0,30:30:81.21:1393,81,0	1/1:0,32:32:96.32:1665,96,0	1/1:1,31:32:78.27:1374,78,0	1/1:0,6:6:12.04:212,12,0
chr10	68963391	.	AT	A	8518.41	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=10.594;DP=582;FS=3.817;HRun=8;HaplotypeScore=61.0057;InbreedingCoeff=0.9994;MQ=86.22;MQ0=0;MQRankSum=-2.391;QD=24.91;ReadPosRankSum=4.188;VQSLOD=5.6638;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:78.24:0,78,941	1/1:1,9:10:24.02:232,24,0	0/0:28,0:28:66.12:0,66,735	0/0:22,0:22:47.95:0,48,533	0/0:33,0:33:78.20:0,78,907	1/1:2,22:24:66.10:637,66,0	1/1:3,18:21:45.07:434,45,0	0/0:24,0:24:63.19:0,63,761	1/1:0,17:17:45.07:435,45,0	0/0:24,0:24:63.19:0,63,761	0/0:25,0:25:69.20:0,69,822	1/1:1,18:19:45.07:434,45,0	1/1:1,20:21:54.09:522,54,0	1/1:1,12:13:33.05:319,33,0	1/1:1,22:23:63.10:608,63,0	1/1:1,13:14:39.06:377,39,0	1/1:3,21:24:60.09:579,60,0	0/0:13,0:13:39.08:0,39,444	1/1:5,14:19:42.05:401,42,0	1/1:1,27:28:78.12:753,78,0	1/1:1,13:14:36.06:348,36,0	1/1:0,15:15:45.02:425,45,0	0/0:18,0:18:54.17:0,54,652	0/0:26,0:26:72.12:0,72,836	1/1:3,17:20:51.08:492,51,0	1/1:2,25:27:41.87:683,42,0	1/1:2,22:24:60.10:579,60,0	1/1:0,9:9:27.04:261,27,0
chr10	68963450	.	AAC	A	365.01	PASS	AB=0.952;AC=17;AF=0.327;AN=52;BaseQRankSum=5.055;DP=503;FS=10.389;HRun=0;HaplotypeScore=80.4256;InbreedingCoeff=-0.1941;MQ=67.64;MQ0=15;MQRankSum=-0.679;QD=1.34;ReadPosRankSum=3.922;VQSLOD=0.4431;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:22:20.43:20,0,114	0/1:6,1:7:35.50:56,0,36	./.	./.	0/1:20,2:22:26.51:27,0,27	0/1:19,0:19:4.79:5,0,304	0/0:16,0:15:15.02:0,15,192	0/0:16,0:16:5.98:0,6,64	0/0:7,0:7:2.99:0,3,24	1/1:14,0:17:14.20:70,14,0	1/1:13,0:22:17:83,17,0	0/1:16,1:17:79.43:79,0,113	0/0:12,0:11:6.02:0,6,78	0/1:7,0:7:9.23:9,0,140	0/1:13,1:14:8.44:8,0,287	0/0:16,0:16:9.01:0,9,112	0/0:27,0:27:33.07:0,33,447	0/0:13,0:13:12.02:0,12,147	0/0:14,0:14:3.01:0,3,43	0/1:26,1:28:49.15:49,0,203	0/1:15,0:14:20.50:21,0,77	0/1:12,0:12:17.05:17,0,122	0/0:12,0:12:9.02:0,9,114	0/1:26,4:30:37.96:38,0,264	0/1:13,1:13:20.48:20,0,100	0/1:24,1:25:17.48:17,0,149	0/0:17,0:17:15.94:0,16,222	0/0:5,0:5:9.01:0,9,112
chr10	68963809	.	GA	G	7495.30	PASS	AB=0.981;AC=37;AF=0.661;AN=56;BaseQRankSum=8.299;DP=642;FS=2.472;HRun=9;HaplotypeScore=68.0331;InbreedingCoeff=0.9201;MQ=76.62;MQ0=10;MQRankSum=0.672;QD=18.42;ReadPosRankSum=5.123;VQSLOD=5.1537;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:78.20:0,78,878	1/1:1,7:8:24:215,24,0	0/1:51,0:18:7.77:8,0,166	0/0:55,1:29:19.86:0,20,399	0/0:21,0:21:60.17:0,60,682	1/1:1,27:28:72.04:659,72,0	1/1:3,8:11:18.01:165,18,0	0/0:27,0:27:72.13:0,72,796	1/1:1,18:19:42.02:384,42,0	0/0:22,0:23:68.99:0,69,755	0/0:30,0:29:78.20:0,78,873	1/1:2,14:16:33.02:302,33,0	1/1:2,22:24:60.03:549,60,0	1/1:1,13:14:33.02:302,33,0	1/1:2,17:19:42.02:384,42,0	1/1:3,22:25:54.03:495,54,0	1/1:1,19:20:45.02:412,45,0	0/0:21,0:21:51.02:0,51,569	1/1:2,31:33:87.01:786,87,0	1/1:2,22:24:59.92:530,60,0	1/1:0,6:6:12.01:110,12,0	1/1:0,6:6:12:110,12,0	0/0:15,0:15:39.05:0,39,426	0/0:14,0:14:27.04:0,27,297	1/1:6,17:23:30.01:275,30,0	1/1:1,21:22:60.03:548,60,0	1/1:6,28:34:74.91:685,75,0	1/1:1,22:23:63.03:577,63,0
chr10	68965989	.	T	TAAAG	467.91	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-4.361;DP=673;FS=0.000;HRun=0;HaplotypeScore=105.6173;InbreedingCoeff=0.9393;MQ=86.75;MQ0=0;MQRankSum=-1.564;QD=46.79;ReadPosRankSum=0.834;VQSLOD=4.1945;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,99,1819	0/0:9,0:9:24.08:0,24,423	0/0:26,0:26:75.22:0,75,1304	0/0:18,0:18:48.10:0,48,804	0/0:23,0:23:66.20:0,66,1168	0/0:27,0:27:81.28:0,81,1496	0/0:28,0:28:81.28:0,81,1505	0/0:31,0:31:87.29:0,87,1581	0/0:21,0:21:54.19:0,54,1008	0/0:24,0:24:63.20:0,63,1144	0/0:13,0:13:36.12:0,36,663	0/0:25,0:25:69.24:0,69,1280	0/0:31,0:31:87.30:0,87,1597	0/0:18,0:18:42.14:0,42,767	0/0:31,0:31:90.31:0,90,1656	0/0:28,0:28:78.25:0,78,1425	0/0:25,0:25:72.23:0,72,1304	1/1:2,8:10:21.07:560,21,0	0/0:26,0:26:78.22:0,78,1323	0/0:24,0:24:69.24:0,69,1280	0/0:38,0:38:99:0,102,1797	0/0:17,0:17:45.14:0,45,794	0/0:24,0:24:69.22:0,69,1257	0/0:33,0:33:93.32:0,93,1700	0/0:32,0:32:90.26:0,90,1608	0/0:27,0:27:78.26:0,78,1426	0/0:27,0:27:75.24:0,75,1350	0/0:3,0:3:9.03:0,9,168
chr10	68967333	.	GGGGGT	G	407.38	PASS	AB=1.000;AC=7;AF=0.130;AN=54;BaseQRankSum=2.081;DP=281;FS=0.000;HRun=0;HaplotypeScore=54.3300;InbreedingCoeff=0.7247;MQ=75.20;MQ0=2;MQRankSum=2.062;QD=10.72;ReadPosRankSum=-1.446;VQSLOD=1.7441;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:42.85:0,43,676	./.	0/0:10,0:7:8.64:0,9,145	0/0:25,0:19:26.38:0,26,559	0/0:10,0:10:23.84:0,24,382	0/0:10,0:10:27.05:0,27,394	0/0:10,0:10:24.02:0,24,307	0/0:12,0:12:27.05:0,27,338	0/0:11,0:11:21.04:0,21,369	1/1:4,8:12:18.60:184,19,0	1/1:5,0:5:11.80:100,12,0	0/0:7,0:7:9:0,9,132	0/0:8,0:8:17.73:0,18,285	0/0:9,0:9:21.93:0,22,296	0/0:10,0:10:26.89:0,27,392	0/0:8,0:8:18.51:0,19,293	0/0:19,0:19:39.05:0,39,582	1/1:13,0:13:26.99:255,27,0	0/0:8,0:8:19.55:0,20,192	0/0:8,0:8:14.88:0,15,171	0/0:15,0:15:34.29:0,34,438	0/0:11,0:11:22.21:0,22,245	0/0:4,0:4:6.02:0,6,103	0/0:2,0:2:6:0,6,101	0/0:10,0:10:20.93:0,21,251	0/1:8,0:8:9.06:9,0,202	0/0:10,0:9:15.03:0,15,275	0/0:4,0:4:11.98:0,12,195
chr10	68967785	.	T	TA	16638.76	PASS	AC=38;AF=0.679;AN=56;BaseQRankSum=-16.161;DP=607;FS=3.928;HRun=2;HaplotypeScore=48.9678;InbreedingCoeff=0.9990;MQ=77.90;MQ0=0;MQRankSum=-2.180;QD=39.24;ReadPosRankSum=3.838;VQSLOD=5.2583;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:54.17:0,54,668	1/1:1,10:11:27.09:389,27,0	0/0:14,0:14:39.12:0,39,476	0/0:13,0:13:29.09:0,29,330	0/0:30,0:30:90.25:0,90,1089	1/1:0,33:33:87.29:1253,87,0	1/1:0,22:22:66.22:951,66,0	0/0:26,0:26:66.19:0,66,797	1/1:3,13:16:33.11:475,33,0	0/0:25,0:25:66.19:0,66,797	0/0:27,0:27:78.25:0,78,967	1/1:0,22:22:60.20:864,60,0	1/1:1,26:27:75.25:1080,75,0	1/1:1,18:19:51.17:735,51,0	1/1:3,20:23:54.18:778,54,0	1/1:1,19:21:63.21:892,63,0	1/1:1,24:25:66.22:950,66,0	1/1:1,16:17:39.13:562,39,0	1/1:0,14:14:42.13:587,42,0	1/1:1,25:26:72.20:1014,72,0	1/1:0,14:14:39.13:562,39,0	1/1:1,24:25:72.20:1014,72,0	0/0:14,0:14:42.09:0,42,481	0/0:13,0:13:36.11:0,36,446	1/1:0,31:30:93.31:1340,93,0	1/1:2,30:32:90.30:1295,90,0	1/1:0,38:38:99:1599,111,0	1/1:1,7:8:21.07:302,21,0
chr10	68969058	.	AGTGTGTGT	A	18184.82	PASS	AB=0.664;AC=34;AF=0.607;AN=56;BaseQRankSum=12.694;DP=654;FS=0.378;HRun=0;HaplotypeScore=180.9707;InbreedingCoeff=0.8221;MQ=50.89;MQ0=2;MQRankSum=-14.232;QD=43.92;ReadPosRankSum=4.288;VQSLOD=4.3322;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:39:72.25:0,72,2630	1/1:2,8:10:24.08:603,24,0	0/0:16,0:9:15.05:0,15,368	0/0:13,0:8:15.05:0,15,584	0/0:23,0:23:51.17:0,51,1744	1/1:11,15:27:27.09:668,27,0	1/1:11,12:23:27.09:692,27,0	0/0:19,0:30:63.21:0,63,2242	1/1:10,12:22:36.12:923,36,0	0/0:36,0:36:78.25:0,78,2723	0/0:17,0:17:51.15:0,51,1766	1/1:7,26:33:68.93:1765,69,0	0/1:11,16:28:50.47:1255,0,50	1/1:6,13:20:45.15:1130,45,0	1/1:9,31:40:81.28:2071,81,0	1/1:12,21:33:69.23:1743,69,0	0/1:14,10:24:63.55:514,0,64	0/0:15,0:15:12.93:0,13,438	1/1:8,8:16:24.08:587,24,0	1/1:6,20:27:60.10:1474,60,0	1/1:5,5:10:6.02:148,6,0	1/1:8,10:19:27.09:671,27,0	0/0:23,0:23:42.14:0,42,1593	0/0:25,0:27:45.03:0,45,1595	1/1:9,15:25:42.14:1056,42,0	1/1:6,20:27:60.13:1376,60,0	1/1:5,17:25:51.18:1244,51,0	1/1:1,2:5:12.04:266,12,0
chr10	68969798	.	GA	G	642.13	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.004;DP=465;FS=10.743;HRun=1;HaplotypeScore=42.6039;InbreedingCoeff=0.9687;MQ=72.78;MQ0=0;MQRankSum=-1.280;QD=33.80;ReadPosRankSum=-1.994;VQSLOD=1.5089;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:60.18:0,60,933	0/0:6,0:6:18.06:0,18,288	0/0:10,0:10:27.09:0,27,425	0/0:5,0:5:15.05:0,15,240	0/0:41,0:41:99:0,117,1870	0/0:17,0:17:48.16:0,48,767	0/0:7,0:7:21.07:0,21,336	1/1:0,19:19:54.17:737,54,0	0/0:15,0:15:45.15:0,45,717	0/0:23,0:23:69.22:0,69,1055	0/0:26,0:26:78.25:0,78,1217	0/0:19,0:19:54.18:0,54,863	0/0:19,0:19:57.18:0,57,887	0/0:14,0:14:39.13:0,39,622	0/0:17,0:17:48.16:0,48,767	0/0:10,0:10:30.09:0,30,458	0/0:30,0:30:84.29:0,84,1342	0/0:28,0:28:84.27:0,84,1303	0/0:12,0:12:36.11:0,36,554	0/0:12,0:12:36.12:0,36,568	0/0:11,0:11:30.10:0,30,479	0/0:13,0:13:39.13:0,39,616	0/0:17,0:17:48.16:0,48,767	0/0:8,0:8:24.04:0,24,353	0/0:20,0:20:60.20:0,60,959	0/0:13,0:13:39.13:0,39,616	0/0:16,0:16:45.15:0,45,719	0/0:16,0:16:48.16:0,48,767
chr10	68969902	.	TAC	T	1065.76	PASS	AB=0.818;AC=27;AF=0.482;AN=56;BaseQRankSum=4.297;DP=352;FS=39.197;HRun=0;HaplotypeScore=78.6970;InbreedingCoeff=0.2966;MQ=69.15;MQ0=0;MQRankSum=-2.450;QD=8.01;ReadPosRankSum=-5.881;VQSLOD=0.0480;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:60.21:0,60,1143	0/1:1,1:2:0.42:23,0,0	0/0:7,0:7:18.04:0,18,287	0/0:7,0:5:12.45:0,12,141	0/0:27,0:27:81.26:0,81,1521	1/1:9,3:12:4.31:184,4,0	1/1:6,1:7:1.40:91,1,0	0/0:40,0:40:99:0,114,2081	0/1:10,2:12:2.75:100,0,3	0/0:25,0:25:75.26:0,75,1444	0/0:26,0:26:78.24:0,78,1425	1/1:5,1:6:0.91:80,1,0	0/1:3,1:4:4.57:28,0,5	0/1:5,1:6:14.47:21,0,14	0/1:9,0:9:13.74:34,0,14	0/1:4,1:5:0.93:46,0,1	1/1:8,3:11:4.33:97,4,0	0/0:27,0:27:81.23:0,81,1510	1/1:8,3:11:2.64:105,3,0	0/1:2,7:9:1.54:52,0,2	1/1:2,0:2:5.99:49,6,0	1/1:1,0:1:2.74:12,3,0	0/0:20,0:20:60.18:0,60,1114	0/0:19,0:19:57.16:0,57,1019	0/1:6,1:7:5.56:44,0,6	0/1:9,1:10:24.55:25,0,55	1/1:5,0:5:1.07:41,1,0	1/1:14,0:14:4.75:203,5,0
chr10	68969903	.	ACATATT	A	158.21	PASS	AB=0.943;AC=7;AF=0.125;AN=56;BaseQRankSum=2.548;DP=351;FS=0.000;HRun=0;HaplotypeScore=111.0164;InbreedingCoeff=0.0525;MQ=67.92;MQ0=0;MQRankSum=1.686;QD=3.96;ReadPosRankSum=-5.447;VQSLOD=0.2361;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:66.23:0,66,2325	0/0:2,0:2:0.60:0,1,25	0/0:6,0:6:18.06:0,18,655	0/0:7,0:5:12.04:0,12,314	0/0:27,0:27:81.28:0,81,2979	0/0:13,0:13:8.86:0,9,311	0/1:7,0:7:86.24:86,0,138	0/0:38,0:38:99:0,114,3783	0/0:12,0:12:32.88:0,33,390	0/0:25,0:25:75.26:0,75,2737	0/0:26,0:26:78.27:0,78,2710	0/1:5,0:5:35.27:35,0,113	0/1:6,0:6:31.91:32,0,126	0/0:6,0:6:18.04:0,18,234	0/0:9,0:9:17.44:0,17,230	0/0:5,0:5:15.03:0,15,175	0/1:11,0:11:0.95:1,0,206	0/0:27,0:27:81.28:0,81,2890	0/0:11,0:11:11.89:0,12,295	0/0:9,0:9:12.01:0,12,134	0/0:2,0:2:2.82:0,3,21	1/1:1,0:1:3.01:54,3,0	0/0:20,0:20:60.21:0,60,2127	0/0:19,0:19:57.17:0,57,1937	0/0:6,0:6:14.85:0,15,195	0/1:6,4:10:68.76:69,0,266	0/0:5,0:5:11.85:0,12,139	0/0:14,0:14:31.84:0,32,350
chr10	68969906	.	T	TA	1854.46	PASS	AB=0.753;AC=19;AF=0.339;AN=56;BaseQRankSum=12.761;DP=369;FS=13.922;HRun=1;HaplotypeScore=80.7567;InbreedingCoeff=-0.0656;MQ=67.25;MQ0=0;MQRankSum=-11.587;QD=12.20;ReadPosRankSum=1.813;VQSLOD=0.9417;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:63.20:0,63,818	0/1:2,1:3:16.31:23,0,16	0/0:6,0:6:18.06:0,18,234	0/0:8,0:6:14.07:0,14,155	0/0:26,0:26:78.25:0,78,1013	0/1:12,5:17:60.89:254,0,61	0/1:4,3:7:18.52:70,0,19	0/0:39,0:39:99:0,111,1403	0/1:5,7:12:18.92:223,0,19	0/0:26,0:26:78.24:0,78,999	0/0:24,0:24:72.23:0,72,924	0/1:5,2:7:48.20:59,0,48	0/1:6,3:9:73.59:88,0,74	1/1:1,5:6:17.98:157,18,0	1/1:1,6:7:20.93:179,21,0	0/1:7,2:9:66.40:66,0,98	0/1:10,3:13:48.36:80,0,48	0/0:27,0:27:81.23:0,81,1022	0/1:11,5:16:23.40:215,0,23	0/1:8,2:10:20.76:85,0,21	0/0:1,0:1:2.99:0,3,24	0/0:1,0:1:2.74:0,3,12	0/0:19,0:19:57.19:0,57,740	0/0:18,0:18:54.17:0,54,689	0/1:4,4:8:66.13:87,0,66	0/1:7,3:10:58.66:104,0,59	0/1:4,2:6:17.38:49,0,17	1/1:6,6:12:35.57:290,36,0
chr10	68969909	.	T	TTATATA	8600.69	PASS	AB=0.750;AC=35;AF=0.625;AN=56;BaseQRankSum=13.098;DP=358;FS=0.000;HRun=0;HaplotypeScore=90.8742;InbreedingCoeff=0.8634;MQ=67.81;MQ0=0;MQRankSum=-11.966;QD=60.14;ReadPosRankSum=-2.336;VQSLOD=4.3896;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:66.22:0,66,1569	1/1:2,1:3:9.03:174,9,0	0/0:6,0:6:18.06:0,18,430	0/0:8,0:6:14.95:0,15,278	0/0:26,0:26:78.27:0,78,1989	1/1:11,5:16:47.90:885,48,0	1/1:5,3:8:24.07:537,24,0	0/0:38,0:38:99:0,111,2393	1/1:4,7:11:33.06:833,33,0	0/0:28,0:28:81.26:0,81,1867	0/0:23,0:23:69.24:0,69,1713	1/1:5,2:7:20.53:371,21,0	1/1:6,3:9:24.01:479,24,0	1/1:1,5:6:18.01:477,18,0	1/1:0,5:6:18.06:540,18,0	1/1:5,2:7:21.07:479,21,0	1/1:10,3:13:26.75:512,27,0	0/0:27,0:27:78.23:0,78,1893	1/1:10,5:15:42.04:876,42,0	1/1:5,2:7:15:311,15,0	1/1:1,0:1:3.01:37,3,0	1/1:2,0:2:6.01:87,6,0	0/0:20,0:20:60.18:0,60,1419	0/0:17,0:17:51.18:0,51,1260	1/1:5,4:9:24.08:585,24,0	0/1:6,3:9:52.81:410,0,53	1/1:3,2:5:15.05:380,15,0	1/1:3,6:9:26.97:628,27,0
chr10	68969913	.	T	TA	147.65	PASS	AB=0.892;AC=11;AF=0.196;AN=56;BaseQRankSum=5.460;DP=372;FS=6.306;HRun=0;HaplotypeScore=76.5777;InbreedingCoeff=-0.2590;MQ=68.71;MQ0=0;MQRankSum=-4.895;QD=1.31;ReadPosRankSum=-4.194;VQSLOD=-0.0489;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:66.21:0,66,906	0/1:2,1:3:23.21:23,0,58	0/0:7,0:7:21.06:0,21,266	0/0:8,0:6:14.92:0,15,195	0/0:28,0:28:81.26:0,81,1115	0/1:14,1:15:54.10:54,0,235	0/1:7,1:8:21.40:21,0,179	0/0:35,0:35:99:0,105,1421	0/1:11,1:12:27.17:27,0,144	0/0:26,0:26:78.25:0,78,1063	0/0:24,0:24:72.21:0,72,966	0/0:8,0:8:20.96:0,21,223	0/0:12,0:12:21.41:0,21,248	0/0:6,0:6:14.87:0,15,106	0/0:8,0:8:6.79:0,7,137	0/1:8,1:9:9.12:9,0,224	0/1:11,3:14:28.61:29,0,213	0/0:28,0:28:81.20:0,81,1076	0/1:13,2:15:54.13:54,0,322	0/1:7,1:8:14.27:14,0,139	0/0:3,0:3:2.73:0,3,24	0/0:2,0:2:6.02:0,6,72	0/0:20,0:20:60.18:0,60,802	0/0:16,0:16:48.14:0,48,638	0/1:8,1:9:8.09:8,0,221	0/1:11,1:12:16.77:17,0,281	0/0:6,0:6:13.18:0,13,121	0/1:8,0:8:34.47:34,0,112
chr10	68970479	.	C	CA	540.43	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-4.831;DP=621;FS=3.043;HRun=8;HaplotypeScore=59.1593;InbreedingCoeff=0.9715;MQ=72.39;MQ0=0;MQRankSum=-1.198;QD=21.62;ReadPosRankSum=0.762;VQSLOD=3.9297;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,132,1207	0/0:14,0:14:42.02:0,42,384	0/0:19,0:18:32.93:0,33,290	0/0:16,0:14:29.82:0,30,242	0/0:19,0:19:45.01:0,45,412	0/0:20,0:20:57.03:0,57,522	0/0:21,0:21:60.01:0,60,543	0/0:36,0:36:77.51:0,78,690	0/0:20,0:20:60.03:0,60,549	0/0:21,0:21:51.02:0,51,466	0/0:12,0:12:27:0,27,247	0/0:19,0:19:57.03:0,57,521	0/0:19,0:19:48.02:0,48,439	0/0:30,0:30:78.01:0,78,704	0/0:32,0:32:90.02:0,90,817	0/0:21,0:21:63.03:0,63,577	0/0:32,0:31:84.03:0,84,769	1/1:5,20:25:56.91:635,57,0	0/0:23,0:23:60:0,60,540	0/0:21,0:21:51:0,51,462	0/0:26,0:26:66.03:0,66,604	0/0:14,0:14:30:0,30,275	0/0:16,1:17:13.39:0,13,371	0/0:19,0:19:57.03:0,57,522	0/0:22,0:22:60.03:0,60,549	0/0:19,0:19:48.02:0,48,439	0/0:27,0:27:81.03:0,81,735	0/0:7,0:7:21.01:0,21,192
chr10	68971330	.	AT	A	17232.57	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=14.881;DP=762;FS=0.000;HRun=2;HaplotypeScore=72.2995;InbreedingCoeff=0.9997;MQ=86.79;MQ0=0;MQRankSum=-4.201;QD=36.28;ReadPosRankSum=5.752;VQSLOD=4.9799;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,138,2034	1/1:0,9:9:27.09:350,27,0	0/0:23,1:24:62.73:0,63,850	0/0:28,0:28:78.23:0,78,1110	0/0:34,0:34:93.30:0,93,1374	1/1:1,28:29:75.24:974,75,0	1/1:1,33:34:96.31:1247,96,0	0/0:30,0:30:87.28:0,87,1265	1/1:0,26:26:75.24:974,75,0	0/0:34,0:34:99:0,102,1501	0/0:21,0:21:60.20:0,60,899	1/1:0,33:33:96.31:1245,96,0	1/1:2,27:29:69.22:896,69,0	1/1:1,27:28:72.23:935,72,0	1/1:0,33:33:93.30:1207,93,0	1/1:0,36:36:99:1363,105,0	1/1:0,17:17:51.17:662,51,0	0/0:15,0:15:45.15:0,45,674	1/1:0,19:19:57.16:712,57,0	1/1:0,36:36:99:1384,108,0	1/1:0,34:34:99:1285,99,0	1/1:1,22:23:69.21:881,69,0	0/0:26,0:26:78.25:0,78,1149	0/0:29,0:29:87.25:0,87,1279	1/1:0,15:15:39.13:506,39,0	1/1:0,27:27:81.17:976,81,0	1/1:0,36:36:99:1285,99,0	1/1:2,9:11:27.09:351,27,0
chr10	68971617	.	A	AT	484.97	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-0.932;DP=682;FS=10.984;HRun=7;HaplotypeScore=69.7697;InbreedingCoeff=0.9938;MQ=85.51;MQ0=0;MQRankSum=-1.281;QD=28.53;ReadPosRankSum=-1.059;VQSLOD=3.3442;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:35:99:0,102,985	0/0:9,0:9:24.03:0,24,232	0/0:28,0:29:59.72:0,60,569	0/0:20,0:20:39.06:0,39,374	0/0:26,0:26:72.11:0,72,695	0/0:24,0:24:69.07:0,69,654	0/0:17,0:17:39.05:0,39,372	0/0:23,0:23:54.08:0,54,522	0/0:19,0:19:48.08:0,48,464	0/0:27,0:27:75.12:0,75,724	0/0:27,0:27:72.10:0,72,690	0/0:29,0:29:78.12:0,78,753	0/0:24,0:24:72.09:0,72,683	0/0:20,0:20:54.09:0,54,522	0/0:31,0:31:81.13:0,81,782	0/0:32,0:32:90.13:0,90,864	0/0:29,0:29:87.14:0,87,840	1/1:0,17:17:48.15:580,48,0	0/0:28,0:28:72.07:0,72,680	0/0:28,0:28:81.11:0,81,777	0/0:32,0:32:87.11:0,87,833	0/0:27,0:27:72.09:0,72,690	0/0:20,0:20:60.10:0,60,579	0/0:33,0:33:96.15:0,96,927	0/0:18,0:18:48.06:0,48,454	0/0:22,0:22:63.09:0,63,604	0/0:28,0:28:81.11:0,81,777	0/0:7,0:7:21.03:0,21,203
chr10	68974178	.	TA	T	12105.35	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=13.073;DP=566;FS=6.729;HRun=2;HaplotypeScore=54.6936;InbreedingCoeff=0.9981;MQ=83.62;MQ0=0;MQRankSum=-1.898;QD=35.19;ReadPosRankSum=3.968;VQSLOD=5.0303;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:14:39.13:0,39,580	1/1:0,6:6:18.06:234,18,0	0/0:17,0:17:41.61:0,42,538	0/0:18,0:18:54.06:0,54,745	0/0:28,0:28:84.26:0,84,1218	1/1:0,23:23:60.20:779,60,0	1/1:0,17:17:45.15:584,45,0	0/0:41,0:41:99:0,120,1764	1/1:1,18:19:51.17:662,51,0	0/0:27,0:27:75.25:0,75,1107	0/0:19,0:19:54.18:0,54,805	1/1:0,24:24:59.83:778,60,0	1/1:0,26:26:66.21:857,66,0	1/1:0,12:12:33.11:428,33,0	1/1:2,13:15:39.13:506,39,0	1/1:0,27:27:75.24:974,75,0	1/1:0,18:18:48.16:623,48,0	0/0:14,0:14:42.13:0,42,608	1/1:1,30:31:90.25:1123,90,0	1/1:0,16:16:45.15:584,45,0	1/1:0,20:20:51.17:662,51,0	1/1:0,13:13:36.07:448,36,0	0/0:22,0:22:60.20:0,60,890	0/0:22,0:22:66.22:0,66,989	1/1:1,23:24:69.22:896,69,0	1/1:0,15:15:45.14:570,45,0	1/1:0,31:31:87.28:1127,87,0	1/1:0,7:7:21.07:272,21,0
chr10	68975488	.	TA	T	16736.56	PASS	AC=40;AF=0.714;AN=56;BaseQRankSum=10.854;DP=770;FS=4.003;HRun=5;HaplotypeScore=78.4300;InbreedingCoeff=0.9973;MQ=80.51;MQ0=0;MQRankSum=-4.727;QD=30.16;ReadPosRankSum=4.409;VQSLOD=5.4604;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,138,1869	1/1:1,15:16:42.12:476,42,0	0/0:23,0:23:53.93:0,54,669	0/0:16,0:16:42.13:0,42,557	0/0:22,0:22:63.20:0,63,845	1/1:2,18:20:51.15:579,51,0	1/1:1,32:33:87.25:987,87,0	1/1:1,29:30:84.21:932,84,0	1/1:0,26:26:78.22:885,78,0	0/0:26,0:26:60.20:0,60,820	0/0:21,0:21:60.20:0,60,820	1/1:0,37:37:99:1123,99,0	1/1:2,41:43:99:1224,108,0	1/1:0,29:29:81.23:919,81,0	1/1:4,38:42:99:1259,111,0	1/1:1,38:39:99:1123,99,0	1/1:1,23:24:66.19:749,66,0	1/1:0,12:12:33.09:374,33,0	1/1:1,13:14:42.05:441,42,0	1/1:1,21:22:63.18:712,63,0	1/1:5,43:48:99:1326,117,0	1/1:0,22:22:60.17:680,60,0	0/0:24,0:24:69.23:0,69,943	0/0:34,1:35:65.27:0,65,1247	1/1:1,25:26:69.20:783,69,0	1/1:3,32:35:93.24:1041,93,0	1/1:2,30:32:84.24:953,84,0	1/1:0,5:5:15.04:170,15,0
chr10	68978344	.	ACCT	A	877.62	PASS	AB=0.991;AC=23;AF=0.426;AN=54;BaseQRankSum=3.148;DP=269;FS=6.231;HRun=0;HaplotypeScore=58.7110;InbreedingCoeff=0.0866;MQ=39.20;MQ0=19;MQRankSum=-0.336;QD=4.45;ReadPosRankSum=0.615;VQSLOD=0.2486;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:7:17.82:0,18,165	1/1:6,0:6:5.50:33,5,0	./.	0/0:10,0:3:2.99:0,3,23	0/0:3,0:3:5.99:0,6,50	0/1:8,0:9:35.09:41,0,35	0/1:12,0:12:17.10:67,0,17	0/0:7,0:6:12.86:0,13,79	0/1:14,0:14:18.97:48,0,19	0/0:5,0:5:15.03:0,15,148	0/0:3,0:2:6.01:0,6,91	1/1:16,0:15:21.93:151,22,0	1/1:11,0:9:1.08:48,1,0	0/1:16,0:14:11.12:74,0,11	0/1:10,0:9:1.99:54,0,2	0/1:11,0:11:26.12:73,0,26	0/1:13,0:13:35.93:85,0,36	0/1:7,0:6:3.43:3,0,65	0/0:9,0:9:14.11:0,14,105	1/1:5,0:5:5.91:38,6,0	1/1:32,0:28:18.27:146,18,0	0/0:8,0:7:5.70:0,6,29	0/0:9,0:8:20.99:0,21,216	0/0:6,0:6:17.96:0,18,223	0/1:7,0:7:28.25:43,0,28	0/1:12,0:12:43.60:44,0,53	1/1:3,4:7:10.87:65,11,0	0/1:8,0:6:8.08:34,0,8
chr10	68979216	.	GA	G	5990.95	PASS	AB=0.762;AC=39;AF=0.696;AN=56;BaseQRankSum=8.084;DP=552;FS=11.416;HRun=10;HaplotypeScore=77.2999;InbreedingCoeff=0.7602;MQ=54.46;MQ0=14;MQRankSum=-10.000;QD=15.21;ReadPosRankSum=1.172;VQSLOD=4.0828;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,1:24:37.12:0,37,626	1/1:1,11:12:20.99:182,21,0	0/0:23,0:15:24.01:0,24,242	0/0:20,0:9:15.17:0,15,118	0/0:28,2:30:23.06:0,23,679	0/1:7,10:15:3.20:202,0,3	1/1:8,7:14:23.86:207,24,0	1/1:7,16:23:38.97:337,39,0	1/1:4,10:14:23.98:208,24,0	0/1:26,4:29:32.22:32,0,557	0/0:17,1:17:13.07:0,13,357	1/1:4,9:13:26.99:234,27,0	1/1:4,9:13:26.99:233,27,0	1/1:2,9:11:17.98:156,18,0	1/1:8,18:24:50.99:442,51,0	1/1:4,15:19:28.68:324,29,0	1/1:5,24:29:68.96:596,69,0	1/1:6,10:15:35.97:312,36,0	1/1:10,14:23:47.93:411,48,0	1/1:4,18:22:53.95:464,54,0	0/1:7,3:9:24.24:38,0,24	1/1:6,12:18:32.95:281,33,0	0/0:22,0:22:57.09:0,57,600	0/0:19,0:20:44.64:0,45,526	1/1:8,17:25:49.98:415,50,0	1/1:8,15:23:47.96:415,48,0	1/1:8,14:21:38.76:317,39,0	1/1:3,7:8:20.99:182,21,0
chr10	68979248	.	G	GA	8255.39	PASS	AB=0.672;AC=37;AF=0.661;AN=56;BaseQRankSum=1.179;DP=646;FS=10.922;HRun=10;HaplotypeScore=88.1282;InbreedingCoeff=0.6303;MQ=62.61;MQ0=1;MQRankSum=-6.857;QD=18.64;ReadPosRankSum=0.888;VQSLOD=4.8052;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,2:26:1.93:0,2,428	0/1:3,7:10:0.57:200,0,1	0/1:35,0:18:17.32:17,0,146	0/0:28,0:12:9.08:0,9,60	0/0:41,1:42:81.66:0,82,864	1/1:3,13:17:47.15:453,47,0	1/1:2,15:18:38.93:398,39,0	1/1:18,1:44:49.62:239,50,0	1/1:4,11:16:35.92:366,36,0	0/0:34,2:36:31.86:0,32,672	0/0:23,0:24:61.86:0,62,498	1/1:6,7:14:26.90:270,27,0	1/1:5,10:16:5.27:245,5,0	0/1:2,9:11:0.58:199,0,1	1/1:2,22:26:65.82:662,66,0	1/1:3,17:21:32.32:526,32,0	0/1:10,13:24:3.05:353,0,3	1/1:3,0:15:25.60:128,26,0	1/1:9,21:31:19.71:605,20,0	1/1:7,18:25:54.14:575,54,0	0/1:4,9:12:16.21:255,0,16	1/1:1,20:21:57.61:607,58,0	0/0:31,0:31:71.88:0,72,591	0/0:16,0:16:35.94:0,36,295	1/1:3,26:29:69.17:730,69,0	1/1:5,14:19:26.52:478,27,0	1/1:3,21:23:63.14:663,63,0	1/1:2,12:13:27.07:288,27,0
chr10	68979529	.	TC	T	18298.34	PASS	AC=36;AF=0.643;AN=56;BaseQRankSum=13.270;DP=716;FS=1.292;HRun=1;HaplotypeScore=72.6417;InbreedingCoeff=1.0000;MQ=90.92;MQ0=0;MQRankSum=-3.746;QD=39.52;ReadPosRankSum=5.748;VQSLOD=5.1294;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:93.32:0,93,1483	1/1:0,16:16:45.15:629,45,0	0/0:29,0:28:82.79:0,83,1197	0/0:29,0:29:81.26:0,81,1207	0/0:23,0:23:60.20:0,60,958	1/1:0,21:21:57.19:797,57,0	1/1:0,33:33:96.32:1342,96,0	0/0:30,0:30:90.30:0,90,1418	1/1:0,37:37:99:1468,105,0	0/0:31,0:31:84.28:0,84,1312	0/0:25,0:25:69.05:0,69,1080	1/1:0,30:30:81.27:1131,81,0	1/1:0,26:26:72.24:1006,72,0	1/1:0,28:28:78.26:1090,78,0	1/1:0,33:33:96.32:1342,96,0	1/1:0,24:24:72.24:1007,72,0	1/1:0,22:22:60.20:839,60,0	0/0:18,0:18:51.16:0,51,791	1/1:0,27:27:81.25:1101,81,0	1/1:0,19:19:54.18:755,54,0	1/1:0,43:43:99:1636,117,0	1/1:0,15:15:39.13:545,39,0	0/0:16,0:16:45.15:0,45,719	0/0:20,0:20:57.19:0,57,901	1/1:0,15:15:45.15:629,45,0	1/1:0,27:27:81.27:1133,81,0	1/1:0,30:30:90.30:1259,90,0	1/1:0,17:16:42.14:587,42,0
chr10	68981225	.	TTTTGTTTG	T	14111.01	PASS	AB=0.854;AC=37;AF=0.661;AN=56;BaseQRankSum=2.922;DP=621;FS=1.840;HRun=0;HaplotypeScore=161.6382;InbreedingCoeff=0.7482;MQ=58.91;MQ0=4;MQRankSum=-11.524;QD=33.05;ReadPosRankSum=2.894;VQSLOD=4.4024;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:39.11:0,39,1376	1/1:2,6:8:15.05:380,15,0	0/1:18,0:13:6.73:7,0,276	0/0:21,0:17:17.97:0,18,304	0/0:24,0:24:63.22:0,63,2280	1/1:4,22:26:39.13:996,39,0	0/1:4,14:18:12.87:587,0,13	0/0:21,0:36:50.30:0,50,381	1/1:4,19:23:36.12:918,36,0	0/0:4,0:23:56.88:0,57,459	0/0:8,0:26:56.69:0,57,485	1/1:6,15:21:28.67:761,29,0	1/1:8,22:30:39.13:998,39,0	1/1:1,15:16:30.10:760,30,0	1/1:4,17:21:33.08:791,33,0	1/1:5,12:17:24.08:616,24,0	1/1:6,12:17:15.05:353,15,0	0/1:26,0:26:99:124,0,115	1/1:15,7:21:21.05:473,21,0	1/1:10,27:37:63.18:1501,63,0	1/1:6,5:11:3.01:73,3,0	1/1:5,15:20:35.95:689,36,0	0/0:25,0:25:48.13:0,48,1472	0/0:19,0:19:48.16:0,48,1749	1/1:5,16:21:36.12:918,36,0	1/1:1,22:24:38.63:1470,39,0	1/1:11,23:33:35.86:924,36,0	1/1:1,15:16:30.10:771,30,0
chr10	68981249	.	GTTTGTTTTTGT	G	705.70	PASS	AB=0.867;AC=3;AF=0.054;AN=56;BaseQRankSum=1.054;DP=655;FS=15.541;HRun=0;HaplotypeScore=249.3403;InbreedingCoeff=-0.0601;MQ=55.63;MQ0=4;MQRankSum=2.369;QD=8.30;ReadPosRankSum=-2.479;VQSLOD=0.8132;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:48.16:0,48,2250	0/0:9,0:9:20.58:0,21,298	0/0:22,0:14:14.91:0,15,838	0/0:22,0:16:29.81:0,30,777	0/0:30,0:30:87.30:0,87,3908	0/0:31,0:31:61.32:0,61,908	0/0:22,0:22:44.97:0,45,700	0/1:32,0:30:99:319,0,1054	0/0:23,0:23:43.72:0,44,475	0/0:33,0:33:6.65:0,7,2195	0/1:26,0:26:14.60:15,0,1514	0/0:27,0:27:52.06:0,52,907	0/0:30,0:30:58.16:0,58,824	0/0:20,0:20:41.44:0,41,514	0/0:25,0:25:53.14:0,53,850	0/0:18,0:18:36.32:0,36,574	0/0:16,0:15:12.55:0,13,271	0/1:9,18:27:25.75:471,0,26	0/0:20,0:19:20.19:0,20,798	0/0:36,0:36:69.93:0,70,1030	0/0:10,0:10:20.86:0,21,512	0/0:20,0:20:48.08:0,48,817	0/0:23,0:23:66.23:0,66,2526	0/0:20,0:20:60.21:0,60,2490	0/0:20,0:20:43.42:0,43,462	0/0:29,0:29:70.52:0,71,726	0/0:32,0:32:58.74:0,59,897	0/0:15,0:15:26.85:0,27,110
chr10	68981828	.	C	CT	9877.34	PASS	AB=0.565;AC=40;AF=0.714;AN=56;BaseQRankSum=-9.559;DP=680;FS=4.493;HRun=10;HaplotypeScore=76.9940;InbreedingCoeff=0.6409;MQ=80.16;MQ0=0;MQRankSum=-1.482;QD=19.07;ReadPosRankSum=-0.084;VQSLOD=5.5289;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:36:64.31:0,64,679	1/1:1,4:5:12.03:128,12,0	0/0:18,0:17:23.98:0,24,199	0/0:24,0:24:4.33:0,4,206	0/0:32,0:34:19.97:0,20,476	0/1:4,14:18:10.36:295,0,10	1/1:1,16:17:48.12:512,48,0	1/1:15,3:30:55.09:337,55,0	1/1:3,18:21:26.52:477,27,0	1/1:7,17:24:29.47:508,29,0	1/1:3,16:19:38.94:367,39,0	1/1:9,28:37:41.58:635,42,0	1/1:5,16:23:38.08:418,38,0	1/1:10,22:34:41.29:604,41,0	1/1:6,24:30:35.51:583,36,0	1/1:2,26:28:57.14:608,57,0	1/1:5,24:29:35.37:583,35,0	1/1:6,0:19:20.58:114,21,0	1/1:7,15:23:47.89:461,48,0	1/1:2,21:23:57.02:569,57,0	0/1:5,15:21:4.34:353,0,4	0/1:4,16:21:26.02:326,0,26	0/0:23,0:23:26.69:0,27,363	0/0:25,1:27:43.99:0,44,543	1/1:2,14:16:30.08:320,30,0	1/1:5,28:33:56.52:785,57,0	0/1:8,23:32:12.46:566,0,12	1/1:1,13:14:11.45:327,11,0
chr10	68982235	.	CA	C	2039.24	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=11.315;DP=716;FS=1.748;HRun=1;HaplotypeScore=72.3753;InbreedingCoeff=0.9978;MQ=82.72;MQ0=0;MQRankSum=-3.451;QD=39.22;ReadPosRankSum=3.170;VQSLOD=4.4263;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:78:0,78,1220	0/0:7,0:7:21.07:0,21,335	0/0:18,0:18:54.18:0,54,856	0/0:22,0:22:63.19:0,63,978	0/0:33,0:33:96.31:0,96,1510	0/0:39,0:39:99:0,117,1843	0/0:22,0:22:66.23:0,66,1055	0/0:32,0:32:90.29:0,90,1379	0/0:24,0:24:72.23:0,72,1127	1/1:0,23:23:69.22:948,69,0	1/1:0,29:29:87.29:1213,87,0	0/0:18,0:18:54.18:0,54,863	0/0:38,0:38:99:0,114,1822	0/0:36,0:36:99:0,108,1726	0/0:33,0:33:99:0,99,1488	0/0:34,0:34:99:0,102,1607	0/0:23,0:22:69.20:0,69,1056	0/0:14,0:14:42.14:0,42,671	0/0:13,0:13:39.13:0,39,620	0/0:27,0:27:78.23:0,78,1199	0/0:32,0:32:96.31:0,96,1507	0/0:29,0:29:87.29:0,87,1369	0/0:26,0:26:75.21:0,75,1125	0/0:16,0:16:45.15:0,45,719	0/0:20,0:20:60.20:0,60,959	0/0:36,1:37:69.43:0,69,1642	0/0:29,0:29:87.27:0,87,1344	0/0:14,0:14:42.14:0,42,671
chr10	68982621	.	AC	A	23829.28	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=11.151;DP=799;FS=1.740;HRun=1;HaplotypeScore=80.3164;InbreedingCoeff=0.9996;MQ=83.11;MQ0=0;MQRankSum=-4.313;QD=38.94;ReadPosRankSum=3.964;VQSLOD=5.5187;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,147,2292	1/1:0,9:9:24.08:336,24,0	0/0:21,0:21:60.09:0,60,826	0/0:22,0:22:62.93:0,63,860	0/0:22,0:22:66.21:0,66,1025	1/1:0,25:25:69.19:943,69,0	1/1:0,33:33:90.30:1259,90,0	1/1:0,36:36:99:1426,105,0	1/1:0,29:29:81.27:1133,81,0	1/1:0,32:32:96.32:1342,96,0	1/1:0,15:15:44.98:541,45,0	1/1:0,45:45:99:1762,126,0	1/1:0,43:43:99:1716,123,0	1/1:0,31:31:84.28:1175,84,0	1/1:0,45:45:99:1720,123,0	1/1:0,36:36:96.32:1343,96,0	1/1:0,22:22:57.19:797,57,0	0/0:20,0:20:57.19:0,57,911	1/1:0,22:22:66.21:907,66,0	1/1:0,22:22:63.21:881,63,0	1/1:0,35:35:93.31:1300,93,0	1/1:0,32:32:87.25:1194,87,0	0/0:16,0:16:45.15:0,45,719	0/0:36,0:35:99:0,108,1694	1/1:0,18:18:54.18:755,54,0	1/1:0,32:32:96.31:1327,96,0	1/1:0,32:32:90.30:1258,90,0	1/1:0,18:18:51.17:713,51,0
chr10	68984098	.	A	AAGAG	2931.24	PASS	AB=1.000;AC=45;AF=0.833;AN=54;BaseQRankSum=-1.270;DP=543;FS=0.000;HRun=0;HaplotypeScore=147.8292;InbreedingCoeff=0.4030;MQ=49.57;MQ0=7;MQRankSum=-0.609;QD=6.07;ReadPosRankSum=1.087;VQSLOD=2.5482;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:26:11.88:68,12,0	1/1:7,0:7:2.22:7,2,0	./.	0/1:23,0:8:0:0,0,0	1/1:12,14:27:18.06:412,18,0	1/1:31,0:31:15:220,15,0	1/1:14,0:14:5.78:35,6,0	1/1:28,0:26:4.25:29,4,0	1/1:19,1:21:16.81:279,17,0	0/0:20,0:20:3.87:0,4,99	0/1:24,0:24:19.27:19,0,47	1/1:14,0:15:6.02:87,6,0	1/1:16,0:15:12.02:158,12,0	1/1:21,0:19:12.49:162,12,0	1/1:27,0:27:25.31:206,25,0	1/1:30,0:29:14.04:208,14,0	1/1:17,0:16:5.21:30,5,0	1/1:7,0:7:5.92:45,6,0	1/1:11,1:12:14.63:191,15,0	1/1:19,1:20:8.17:96,8,0	1/1:14,0:13:3:25,3,0	1/1:14,0:14:8.19:120,8,0	0/0:20,0:20:11.17:0,11,138	0/0:9,0:11:9.02:0,9,122	0/1:27,0:27:7.95:16,0,8	1/1:24,0:24:22.79:224,23,0	1/1:22,0:24:32.50:409,33,0	1/1:13,0:13:2.71:23,3,0
chr10	68984123	.	AGAGAGAGAGAGAGGTAATTTT	A	6489.45	PASS	AB=0.977;AC=21;AF=0.375;AN=56;BaseQRankSum=6.355;DP=557;FS=15.814;HRun=0;HaplotypeScore=292.3505;InbreedingCoeff=-0.4207;MQ=42.31;MQ0=13;MQRankSum=-8.651;QD=15.49;ReadPosRankSum=-1.001;VQSLOD=1.9943;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:62.74:0,63,3928	0/1:10,0:10:99:190,0,249	0/0:15,0:7:17.99:0,18,556	0/0:12,0:4:9.41:0,9,112	0/0:34,0:33:75.21:0,75,3507	0/1:26,0:26:99:104,0,1162	0/1:16,0:16:99:109,0,468	0/1:31,0:29:99:992,0,679	0/1:18,0:18:97.29:97,0,1108	0/1:6,19:25:1.96:1489,0,2	1/1:7,15:22:21.07:1229,21,0	0/1:16,0:16:99:144,0,938	0/1:13,0:12:64.95:65,0,681	0/1:16,0:14:67.53:68,0,626	0/1:31,0:31:99:131,0,1462	0/1:26,0:25:76.55:77,0,1018	0/1:14,0:13:33.89:34,0,311	0/0:9,0:8:21.07:0,21,1082	0/1:17,0:15:99:145,0,634	0/1:25,0:25:99:156,0,831	0/1:9,0:8:31.71:32,0,90	0/0:15,0:15:9.03:0,9,469	0/0:16,0:16:36.12:0,36,2198	0/0:11,0:11:27.09:0,27,1753	0/1:33,0:33:46.64:47,0,338	0/1:33,0:33:99:803,0,2534	0/1:24,0:23:99:353,0,1888	0/1:14,0:14:99:225,0,776
chr10	68984135	.	AGGTAATTTT	A	8266.82	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=7.507;DP=488;FS=7.307;HRun=0;HaplotypeScore=172.2343;InbreedingCoeff=0.8022;MQ=45.20;MQ0=10;MQRankSum=-9.745;QD=21.70;ReadPosRankSum=2.334;VQSLOD=3.0601;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:45.15:0,45,1930	1/1:2,6:8:9.03:261,9,0	0/0:17,0:9:21.07:0,21,736	0/0:10,0:5:8.45:0,8,199	0/0:27,0:27:66.17:0,66,2441	1/1:12,12:24:9.02:196,9,0	1/1:6,10:16:5.14:161,5,0	1/1:8,15:23:45.15:1156,45,0	1/1:12,8:20:21.07:431,21,0	1/1:19,0:19:36.12:932,36,0	1/1:20,1:21:21.07:523,21,0	1/1:9,3:12:9.83:193,10,0	1/1:10,2:11:8.24:155,8,0	1/1:10,3:12:7.33:108,7,0	1/1:14,10:24:26.65:442,27,0	1/1:15,11:25:10.54:178,11,0	1/1:8,4:11:4.29:109,4,0	0/0:7,0:6:15.05:0,15,667	1/1:11,3:12:18.06:389,18,0	1/1:11,11:22:12.04:274,12,0	1/1:5,0:4:3.01:63,3,0	1/1:8,9:17:2.84:14,3,0	0/0:11,0:11:30.10:0,30,1226	0/0:11,0:11:27.09:0,27,1233	1/1:16,13:29:9.03:224,9,0	1/1:20,14:34:57.15:1364,57,0	1/1:15,6:21:30.10:669,30,0	1/1:2,7:9:15.05:424,15,0
chr10	68984136	.	G	GAGA	2146.97	PASS	AB=0.965;AC=34;AF=0.607;AN=56;BaseQRankSum=5.533;DP=417;FS=0.609;HRun=0;HaplotypeScore=140.2062;InbreedingCoeff=0.3551;MQ=47.06;MQ0=10;MQRankSum=-3.761;QD=7.06;ReadPosRankSum=0.177;VQSLOD=3.1432;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:26.67:0,27,343	1/1:7,0:7:3.74:15,4,0	0/0:17,0:9:24.07:0,24,307	0/0:10,0:5:11.17:0,11,142	0/1:25,0:25:99:124,0,497	1/1:17,0:19:15.51:235,16,0	1/1:13,0:14:0.33:35,0,0	0/0:20,0:20:15.76:0,16,231	1/1:17,0:19:20.49:191,20,0	0/0:19,0:19:2.69:0,3,118	0/1:19,0:21:26.33:42,0,26	1/1:5,1:7:6.95:69,7,0	1/1:6,1:8:12.04:170,12,0	1/1:7,3:9:12.51:176,13,0	1/1:12,6:21:26.49:245,26,0	1/1:16,0:17:15.33:217,15,0	1/1:8,0:8:4.12:39,4,0	0/1:8,0:7:20.09:20,0,179	0/1:12,0:11:74.10:74,0,142	1/1:17,0:20:1.34:48,1,0	0/0:4,0:3:2.96:0,3,19	1/1:12,1:14:9.02:128,9,0	0/0:11,0:11:27.09:0,27,415	0/0:10,0:10:27.09:0,27,388	0/1:16,2:19:6.22:25,0,6	0/1:24,0:26:99:152,0,209	1/1:17,0:17:27.93:322,28,0	1/1:8,0:8:2.30:4,2,0
chr10	68984137	.	GTAATTTT	G	6741.84	PASS	AB=1.000;AC=39;AF=0.696;AN=56;BaseQRankSum=9.411;DP=393;FS=0.545;HRun=0;HaplotypeScore=136.7624;InbreedingCoeff=0.5958;MQ=46.93;MQ0=8;MQRankSum=-6.940;QD=22.62;ReadPosRankSum=1.377;VQSLOD=4.4456;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:45.15:0,45,1760	1/1:7,0:7:9.03:206,9,0	0/0:17,0:9:24.07:0,24,824	0/0:10,0:5:12.50:0,12,296	0/0:24,0:24:65.43:0,65,2259	1/1:17,0:17:16.37:203,16,0	1/1:12,0:12:5.14:125,5,0	0/1:20,0:20:10.09:779,0,10	1/1:18,0:18:26.33:437,26,0	1/1:19,0:19:18.98:664,19,0	1/1:20,0:21:21.07:385,21,0	1/1:6,0:6:11.52:171,12,0	1/1:7,0:7:11.36:151,11,0	1/1:10,0:9:10.06:113,10,0	1/1:20,1:21:27.04:411,27,0	1/1:17,0:17:13.07:166,13,0	1/1:8,0:8:4.30:97,4,0	0/0:8,0:7:2.79:0,3,718	0/1:13,0:11:21.08:305,0,21	1/1:18,1:19:14.41:241,14,0	1/1:4,0:3:3.01:38,3,0	1/1:12,1:13:5.83:36,6,0	0/0:10,0:10:30.10:0,30,1215	0/0:10,0:10:27.09:0,27,1128	1/1:17,0:17:9.03:170,9,0	0/1:25,0:25:29.14:1010,0,29	1/1:16,1:16:46.36:703,46,0	1/1:7,0:7:15.05:330,15,0
chr10	68984139	.	AATTTT	A	5612.93	PASS	AB=0.887;AC=39;AF=0.696;AN=56;BaseQRankSum=10.244;DP=387;FS=0.549;HRun=0;HaplotypeScore=127.7648;InbreedingCoeff=0.5593;MQ=48.41;MQ0=8;MQRankSum=-8.820;QD=19.56;ReadPosRankSum=2.131;VQSLOD=4.4300;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:45.15:0,45,1421	1/1:6,1:7:9.03:151,9,0	0/0:17,0:9:24.08:0,24,727	0/0:11,0:6:1.22:0,1,297	0/0:24,0:24:46.57:0,47,1757	1/1:15,1:16:14.86:173,15,0	1/1:11,1:12:5.14:90,5,0	0/1:20,0:20:62.03:506,0,62	1/1:11,7:18:24.69:459,25,0	1/1:19,0:19:1.20:498,1,0	1/1:19,2:21:21.07:344,21,0	1/1:5,1:6:11.93:148,12,0	1/1:6,0:6:11.61:148,12,0	1/1:9,0:8:10.35:115,10,0	1/1:21,0:21:27.08:375,27,0	1/1:14,1:15:17.90:200,18,0	1/1:8,0:8:4.30:89,4,0	0/0:9,0:8:24.08:0,24,712	0/1:9,3:10:68.77:282,0,69	1/1:13,6:19:15.05:232,15,0	1/1:2,2:3:3.01:38,3,0	1/1:12,1:13:5.85:46,6,0	0/0:12,0:12:36.12:0,36,1177	0/0:10,0:10:27.09:0,27,899	1/1:16,1:17:8.90:114,9,0	0/1:21,4:25:99:818,0,123	1/1:9,3:11:33.08:551,33,0	1/1:7,0:7:15.05:238,15,0
chr10	68984140	.	ATTTT	A	3526.69	PASS	AB=1.000;AC=39;AF=0.696;AN=56;BaseQRankSum=10.787;DP=384;FS=0.559;HRun=4;HaplotypeScore=129.7962;InbreedingCoeff=0.5777;MQ=48.46;MQ0=8;MQRankSum=-8.984;QD=12.46;ReadPosRankSum=3.159;VQSLOD=-0.1222;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:45.15:0,45,1250	1/1:7,0:7:9.02:97,9,0	0/0:18,0:9:24.08:0,24,662	0/0:11,0:6:14.78:0,15,290	0/0:25,0:25:71.99:0,72,1769	1/1:15,1:16:9.03:114,9,0	1/1:12,0:12:5.13:62,5,0	0/1:19,0:19:93:332,0,93	1/1:17,0:17:9.51:225,10,0	1/1:19,0:19:12.62:332,13,0	1/1:21,0:21:21.04:215,21,0	1/1:5,1:6:11.93:114,12,0	1/1:5,1:6:11.21:95,11,0	1/1:6,3:8:9.94:93,10,0	1/1:13,8:21:27.08:319,27,0	1/1:14,0:14:11.95:108,12,0	1/1:6,1:8:4.34:71,4,0	0/0:9,0:8:24.08:0,24,652	0/1:11,0:9:74.14:152,0,74	1/1:19,0:19:11.99:117,12,0	1/1:4,0:3:2.50:9,2,0	1/1:12,1:13:3.01:32,3,0	0/0:12,0:12:36.12:0,36,1038	0/0:10,0:10:27.09:0,27,783	1/1:14,3:17:2.05:66,2,0	0/1:25,0:25:99:496,0,174	1/1:12,0:11:30.07:325,30,0	1/1:7,0:7:15.01:153,15,0
chr10	68984145	.	GGT	G	257.95	PASS	AB=0.978;AC=17;AF=0.304;AN=56;BaseQRankSum=8.360;DP=400;FS=7.159;HRun=0;HaplotypeScore=130.4370;InbreedingCoeff=-0.1264;MQ=49.72;MQ0=4;MQRankSum=-7.261;QD=1.30;ReadPosRankSum=3.970;VQSLOD=1.6193;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:45.15:0,45,896	0/1:10,0:10:16.63:17,0,126	0/0:15,1:10:14.66:0,15,418	0/0:11,0:6:10.89:0,11,160	0/0:30,0:30:87.24:0,87,1636	0/1:15,0:15:2.75:3,0,138	1/1:11,0:11:3.22:13,3,0	0/1:22,0:22:87.10:87,0,340	0/0:15,0:15:7.41:0,7,197	0/1:21,0:21:48.79:49,0,72	1/1:20,0:20:7.28:25,7,0	0/1:7,0:7:6.95:7,0,158	0/1:5,0:5:7.23:7,0,73	0/1:7,0:7:0.34:0,0,87	0/1:20,2:22:6.87:7,0,308	0/0:16,0:16:16.75:0,17,409	0/1:6,0:7:3.53:4,0,71	0/0:9,0:8:24.08:0,24,486	0/1:8,0:7:8.58:9,0,68	0/0:21,1:22:3.33:0,3,193	0/0:7,0:6:5.23:0,5,68	0/0:11,1:12:6.01:0,6,79	0/0:14,0:14:42.14:0,42,852	0/0:10,0:10:27.09:0,27,544	0/0:24,0:24:18.54:0,19,404	0/1:23,0:23:84.94:85,0,275	0/1:10,1:10:59.78:61,0,60	0/1:9,0:9:32.30:32,0,77
chr10	68986079	.	AT	A	1828.21	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=4.877;DP=630;FS=0.000;HRun=10;HaplotypeScore=71.1824;InbreedingCoeff=0.9014;MQ=72.03;MQ0=0;MQRankSum=-0.774;QD=19.66;ReadPosRankSum=-1.295;VQSLOD=3.9301;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:69.16:0,69,746	0/0:8,0:8:2.21:0,2,202	0/0:17,1:14:29.92:0,30,283	0/0:13,0:11:16.22:0,16,150	0/0:31,0:31:74.93:0,75,801	0/0:25,0:25:66.18:0,66,730	0/0:16,0:16:45.08:0,45,484	1/1:6,28:34:83.96:727,84,0	0/0:17,0:17:42.07:0,42,451	1/1:4,26:30:47.76:635,48,0	1/1:4,25:29:71.84:608,72,0	0/0:32,0:32:84.20:0,84,908	0/0:12,1:13:7.03:0,7,306	0/0:21,1:22:28.09:0,28,538	0/0:23,1:24:31.10:0,31,571	0/0:28,1:29:34.78:0,35,753	0/0:25,1:26:39.92:0,40,671	0/0:32,0:32:90.11:0,90,933	0/0:23,0:23:51.13:0,51,557	0/0:38,1:39:99:0,108,1187	0/0:11,0:11:30.08:0,30,332	0/0:14,0:14:36.09:0,36,389	0/0:19,0:19:51.12:0,51,555	0/0:13,0:13:36.10:0,36,398	0/0:17,1:18:28.09:0,28,524	0/0:25,0:24:54.78:0,55,679	0/0:31,0:31:84.17:0,84,907	0/0:13,0:13:33.09:0,33,365
chr10	68986145	.	G	GT	9496.06	PASS	AB=0.583;AC=35;AF=0.625;AN=56;BaseQRankSum=-14.483;DP=596;FS=1.443;HRun=9;HaplotypeScore=56.7656;InbreedingCoeff=0.9250;MQ=74.41;MQ0=0;MQRankSum=-2.165;QD=25.73;ReadPosRankSum=1.044;VQSLOD=5.4334;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:62.99:0,63,547	1/1:1,8:9:18.05:199,18,0	0/0:11,0:11:20.12:0,20,184	0/0:10,0:10:20.96:0,21,176	0/0:34,0:34:89.97:0,90,779	1/1:4,19:23:57.15:631,57,0	1/1:2,11:13:7.03:306,7,0	0/0:31,0:31:80.47:0,80,699	1/1:2,13:15:30.08:332,30,0	0/0:26,0:26:65.96:0,66,568	0/0:31,0:31:80.97:0,81,703	1/1:3,22:25:37.11:638,37,0	1/1:3,10:13:11.87:311,12,0	1/1:4,15:19:45.11:489,45,0	1/1:2,21:23:54.15:597,54,0	1/1:0,17:17:51.14:564,51,0	1/1:2,25:28:59.22:691,59,0	0/0:21,0:20:50.95:0,51,437	0/1:6,15:21:4.03:395,0,4	1/1:3,33:36:90.14:957,90,0	1/1:2,10:12:27.07:299,27,0	1/1:1,20:21:31.10:571,31,0	0/0:32,0:32:92.94:0,93,800	0/0:10,0:10:29.99:0,30,260	1/1:5,20:25:34.07:587,34,0	1/1:3,26:29:52.10:773,52,0	1/1:4,27:31:78.21:862,78,0	1/1:1,8:9:27.07:295,27,0
chr10	68989673	.	CCCT	C	1759.88	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.039;DP=736;FS=5.976;HRun=0;HaplotypeScore=101.1805;InbreedingCoeff=0.9992;MQ=80.61;MQ0=0;MQRankSum=-4.115;QD=35.20;ReadPosRankSum=-3.479;VQSLOD=3.3839;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,129,2811	0/0:11,0:11:30.09:0,30,628	0/0:28,0:28:71.80:0,72,1427	0/0:23,0:23:57.20:0,57,1232	0/0:26,0:26:72.25:0,72,1583	0/0:25,0:25:60.21:0,60,1299	0/0:27,0:27:75.26:0,75,1657	1/1:4,32:36:90.29:1440,90,0	0/0:22,0:22:66.23:0,66,1432	0/0:24,0:24:63.22:0,63,1406	0/0:19,0:19:51.17:0,51,1117	0/0:26,0:26:78.27:0,78,1707	0/0:20,0:20:60.21:0,60,1338	0/0:33,0:33:99:0,99,2186	0/0:35,0:35:99:0,99,2167	0/0:29,0:29:84.29:0,84,1840	0/0:31,0:31:90.31:0,90,2001	1/1:2,12:14:27.09:441,27,0	0/0:16,0:16:48.16:0,48,1032	0/0:24,0:24:66.23:0,66,1449	0/0:52,0:52:99:0,151,3328	0/0:24,0:24:69.24:0,69,1502	0/0:28,0:28:81.28:0,81,1804	0/0:21,0:21:63.22:0,63,1382	0/0:20,0:20:60.19:0,60,1278	0/0:28,0:28:84.29:0,84,1847	0/0:36,0:35:99:0,108,2403	0/0:14,0:14:42.14:0,42,938
chr10	68990076	.	GGAGAGAGAGAGAGA	G	1144.06	PASS	AB=0.864;AC=23;AF=0.639;AN=36;BaseQRankSum=1.592;DP=528;FS=0.000;HRun=0;HaplotypeScore=190.1628;InbreedingCoeff=0.3784;MQ=56.52;MQ0=33;MQRankSum=0.086;QD=5.27;ReadPosRankSum=3.529;VQSLOD=2.6301;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:32:0:0,0,0	1/1:5,0:5:2.99:23,3,0	./.	0/0:43,0:19:0:0,0,0	1/1:17,1:16:3.01:50,3,0	1/1:9,3:10:3.01:113,3,0	1/1:18,0:16:6.02:141,6,0	0/0:27,0:24:1.36:0,1,3	./.	./.	./.	1/1:12,2:11:6.01:138,6,0	1/1:17,3:22:12.04:356,12,0	1/1:14,4:18:3.01:32,3,0	./.	0/1:16,0:17:0:0,0,0	1/1:27,0:24:2.07:127,2,0	1/1:13,0:17:3:26,3,0	./.	./.	0/0:24,0:21:0.47:0,0,1	./.	./.	0/0:24,0:22:12.27:0,12,245	1/1:15,5:20:2.68:53,3,0	./.	1/1:18,0:24:6.02:186,6,0	0/0:16,0:10:6.02:0,6,248
chr10	68990753	.	A	AGGAGG	2052.50	PASS	AB=0.975;AC=27;AF=0.482;AN=56;BaseQRankSum=-2.615;DP=551;FS=6.172;HRun=0;HaplotypeScore=182.5547;InbreedingCoeff=-0.1921;MQ=56.87;MQ0=12;MQRankSum=-1.209;QD=5.29;ReadPosRankSum=-5.844;VQSLOD=0.1094;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:81.08:0,81,1324	0/1:6,0:6:16.38:16,0,34	0/0:34,0:17:42.05:0,42,714	0/0:37,0:18:19.91:0,20,393	0/0:17,0:17:45.66:0,46,664	0/1:27,0:26:57.08:57,0,77	0/1:26,0:25:6.77:198,0,7	1/1:22,0:22:33.32:553,33,0	0/1:21,0:20:16.83:51,0,17	1/1:15,0:15:5.87:54,6,0	1/1:14,0:14:0.47:1,0,0	0/1:15,0:14:38.02:38,0,41	0/1:17,0:15:11.76:62,0,12	0/1:17,0:17:19.27:39,0,19	0/1:25,0:24:64.96:65,0,85	0/1:25,0:24:57.23:134,0,57	0/1:21,0:21:76.01:163,0,76	1/1:7,0:12:12.01:125,12,0	0/1:6,0:5:22.97:95,0,23	0/1:19,0:20:2.76:171,0,3	0/1:6,7:14:0:0,0,0	0/1:14,0:13:16.46:16,0,21	0/0:18,0:19:36.12:0,36,723	0/0:24,0:23:51.09:0,51,952	0/1:18,0:15:44.14:61,0,44	0/1:27,0:25:35.41:122,0,35	0/1:18,0:17:97.53:158,0,98	1/1:7,0:5:3.01:38,3,0
chr10	68990755	.	G	GA	1391.83	PASS	AB=0.931;AC=28;AF=0.500;AN=56;BaseQRankSum=-2.759;DP=443;FS=7.362;HRun=0;HaplotypeScore=112.2802;InbreedingCoeff=0.1783;MQ=54.69;MQ0=14;MQRankSum=0.745;QD=5.29;ReadPosRankSum=-5.292;VQSLOD=1.5071;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:81.16:0,81,1035	0/1:6,0:6:3.55:18,0,4	0/0:35,0:18:37.13:0,37,470	0/0:36,0:17:33.36:0,33,345	0/0:19,0:19:33.35:0,33,530	0/1:18,1:18:22.26:53,0,22	1/1:18,4:21:16.37:177,16,0	1/1:19,3:20:2.72:315,3,0	0/1:15,1:15:10.82:16,0,11	1/1:10,0:10:4.98:52,5,0	0/0:9,0:9:0.48:0,0,1	0/1:12,0:11:15.81:17,0,16	1/1:12,0:10:8.40:73,8,0	1/1:10,0:10:11.94:80,12,0	0/1:12,0:11:7.19:71,0,7	0/1:16,3:18:9.74:105,0,10	0/1:12,2:14:0.56:120,0,1	1/1:6,1:7:9.61:65,10,0	0/1:4,1:4:4.15:68,0,4	0/1:15,1:16:2.52:93,0,3	0/0:12,0:11:2.87:0,3,16	0/1:9,1:9:0.16:17,0,0	0/0:16,0:16:39.03:0,39,494	0/0:22,0:21:54.10:0,54,696	1/1:14,0:11:4.49:89,4,0	0/1:21,0:19:38.84:39,0,82	0/1:10,2:11:1.98:86,0,2	1/1:4,0:1:0.89:2,1,0
chr10	68991559	.	AAGCAGCAGCAGCAGC	A	7391.08	PASS	AC=22;AF=0.647;AN=34;BaseQRankSum=5.872;DP=579;FS=0.000;HRun=0;HaplotypeScore=237.3554;InbreedingCoeff=0.6855;MQ=58.25;MQ0=5;MQRankSum=-4.484;QD=23.69;ReadPosRankSum=1.176;VQSLOD=3.7157;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:20:3.01:0,3,56	./.	./.	0/0:22,0:18:3.01:0,3,39	./.	1/1:11,0:10:3.01:43,3,0	1/1:19,11:30:15.05:572,15,0	./.	1/1:9,10:19:15.05:618,15,0	0/0:17,0:17:1.36:0,1,4	./.	1/1:21,22:43:39.47:1608,39,0	1/1:15,12:27:12.04:494,12,0	1/1:15,9:25:18.06:723,18,0	1/1:16,11:27:24.08:989,24,0	1/1:15,7:22:15.05:618,15,0	1/1:29,12:41:9.03:371,9,0	0/0:20,0:34:32.47:0,32,485	0/0:10,0:10:0:0,0,0	./.	1/1:41,3:42:3.01:120,3,0	./.	./.	0/0:45,0:47:78.27:0,78,4671	./.	./.	1/1:9,14:23:29.98:1236,30,0	./.
chr10	68993853	.	T	TAA	13842.22	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=14.894;DP=529;FS=15.823;HRun=2;HaplotypeScore=268.8464;InbreedingCoeff=0.9860;MQ=76.37;MQ0=0;MQRankSum=-15.187;QD=34.18;ReadPosRankSum=3.238;VQSLOD=1.5851;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:81.25:0,81,1212	1/1:3,0:3:9.02:110,9,0	0/0:23,0:23:63.18:0,63,916	0/0:14,0:14:36.10:0,36,504	0/0:26,0:26:78.25:0,78,1172	1/1:16,3:19:57.06:611,57,0	1/1:11,3:14:42.08:528,42,0	1/1:21,5:26:69.22:1021,69,0	1/1:10,1:11:33.07:417,33,0	1/1:21,5:26:72.16:842,72,0	1/1:18,2:20:57.05:629,57,0	1/1:14,0:14:42.09:524,42,0	1/1:28,1:29:81.14:901,81,0	1/1:15,5:20:56.92:650,57,0	1/1:21,12:32:93.19:1051,93,0	1/1:18,1:19:57.12:692,57,0	1/1:9,5:13:27.07:351,27,0	1/1:4,6:10:30.09:434,30,0	1/1:12,4:16:48.15:692,48,0	1/1:19,4:23:66.02:693,66,0	1/1:2,5:7:18.06:271,18,0	1/1:20,9:29:78.19:1034,78,0	0/0:13,0:13:39.12:0,39,572	0/0:18,1:19:54.02:0,54,798	1/1:10,4:14:42.08:485,42,0	1/1:20,3:23:69.15:810,69,0	1/1:17,7:24:66.03:794,66,0	1/1:10,1:11:27.02:300,27,0
chr10	68993854	.	ATCTTTTTC	A	19256.28	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=15.998;DP=460;FS=0.789;HRun=0;HaplotypeScore=280.9889;InbreedingCoeff=0.9227;MQ=79.38;MQ0=0;MQRankSum=-13.420;QD=56.80;ReadPosRankSum=7.581;VQSLOD=3.9004;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:81.28:0,81,3536	1/1:0,2:2:6.02:156,6,0	0/0:23,0:23:66.21:0,66,2371	0/0:13,0:13:34.79:0,35,964	0/0:26,0:26:78.27:0,78,3040	1/1:4,13:17:34.27:1091,34,0	1/1:6,5:11:14.37:381,14,0	1/1:7,9:16:46.02:991,46,0	1/1:2,6:8:20.56:498,21,0	1/1:5,18:23:66.64:1634,67,0	1/1:4,15:19:48.43:1137,48,0	1/1:2,10:12:33.10:722,33,0	1/1:2,20:25:69.15:1630,69,0	1/1:6,12:18:32.67:907,33,0	1/1:12,21:32:71.37:1782,71,0	1/1:2,13:15:45.15:1058,45,0	1/1:5,4:8:17.82:420,18,0	1/1:6,3:9:25.12:480,25,0	1/1:5,4:9:19.40:376,19,0	1/1:6,13:19:38.38:1105,38,0	1/1:6,0:6:0.44:67,0,0	1/1:12,12:24:33.22:903,33,0	0/0:13,0:13:39.13:0,39,1761	0/0:19,0:19:51.65:0,52,2122	1/1:5,9:14:33.15:807,33,0	1/1:3,17:20:57.33:1397,57,0	1/1:5,15:20:39.83:1227,40,0	1/1:4,6:10:20.60:487,21,0
chr10	68993856	.	CT	C	3584.71	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=15.490;DP=450;FS=8.274;HRun=5;HaplotypeScore=268.3127;InbreedingCoeff=0.9609;MQ=78.27;MQ0=0;MQRankSum=-14.816;QD=10.90;ReadPosRankSum=4.764;VQSLOD=-0.1569;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:78.26:0,78,1067	1/1:2,0:2:4.44:14,4,0	0/0:24,0:24:63.16:0,63,804	0/0:12,0:12:28.95:0,29,364	0/0:26,0:26:69.21:0,69,926	1/1:14,3:17:37.56:144,38,0	1/1:5,3:8:21.08:116,21,0	1/1:10,5:15:36.90:215,37,0	1/1:7,1:8:16.74:67,17,0	1/1:18,5:23:56.56:270,57,0	1/1:17,2:19:41.54:175,42,0	1/1:10,0:10:25.32:120,25,0	1/1:25,0:25:29.23:145,29,0	1/1:13,5:18:43.28:217,43,0	1/1:22,10:31:77.25:377,77,0	1/1:14,1:15:32.59:125,33,0	1/1:6,3:8:17.84:96,18,0	1/1:3,6:9:21.64:151,22,0	1/1:4,4:8:20.83:121,21,0	1/1:15,4:19:40.80:164,41,0	1/1:0,5:5:14.89:107,15,0	1/1:14,9:23:56.12:328,56,0	0/0:13,0:13:39.13:0,39,534	0/0:18,1:19:51.05:0,51,659	1/1:10,4:14:32.18:149,32,0	1/1:17,3:20:46.88:194,47,0	1/1:16,4:20:46.04:224,46,0	1/1:9,1:10:16.30:64,16,0
chr10	68993865	.	GTTTTATT	G	15848.18	PASS	AB=0.808;AC=42;AF=0.750;AN=56;BaseQRankSum=15.822;DP=424;FS=14.451;HRun=0;HaplotypeScore=269.4649;InbreedingCoeff=0.8146;MQ=77.30;MQ0=0;MQRankSum=-13.471;QD=51.79;ReadPosRankSum=7.249;VQSLOD=3.1482;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:84.29:0,84,3204	1/1:0,2:2:6.02:136,6,0	0/0:23,0:23:57.19:0,57,1963	0/0:12,0:12:30.10:0,30,931	0/0:21,0:21:57.20:0,57,2062	1/1:3,13:16:26.72:896,27,0	0/1:3,5:8:3.39:290,0,3	1/1:5,9:14:33.64:761,34,0	1/1:1,6:7:18.06:405,18,0	1/1:4,18:22:63.65:1370,64,0	1/1:3,15:18:47.59:937,48,0	1/1:0,10:10:30.10:598,30,0	1/1:4,20:24:56.83:1362,57,0	1/1:5,12:17:21.57:749,22,0	1/1:9,21:30:51.47:1467,51,0	1/1:1,13:14:42.12:889,42,0	1/1:3,4:7:18.05:331,18,0	1/1:6,3:9:19.78:366,20,0	1/1:3,4:7:13.42:299,13,0	1/1:4,13:17:41.51:890,42,0	0/1:5,0:5:12.16:34,0,12	1/1:10,12:22:43.75:789,44,0	0/0:16,0:16:48.16:0,48,1916	0/0:18,0:18:48.64:0,49,1843	1/1:4,9:13:32.70:652,33,0	1/1:2,17:19:48.28:1197,48,0	1/1:3,15:18:29.33:1033,29,0	1/1:1,6:7:18.06:397,18,0
chr10	68993868	.	T	TTC	1879.55	PASS	AB=0.944;AC=20;AF=0.357;AN=56;BaseQRankSum=-3.187;DP=415;FS=6.716;HRun=0;HaplotypeScore=271.3178;InbreedingCoeff=-0.5296;MQ=74.97;MQ0=0;MQRankSum=-8.416;QD=6.44;ReadPosRankSum=-7.342;VQSLOD=0.4769;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:84.24:0,84,1246	0/0:2,0:2:5.68:0,6,28	0/0:20,0:20:56.94:0,57,790	0/0:12,0:12:32.62:0,33,401	0/0:19,0:19:57.18:0,57,849	0/1:15,1:16:45.25:45,0,140	0/1:8,0:8:14.89:87,0,15	0/1:13,1:14:6.49:279,0,6	0/1:7,0:7:13.37:13,0,39	0/1:18,3:21:99:183,0,143	0/1:17,1:18:81.88:127,0,82	0/1:11,0:11:27.80:177,0,28	0/1:23,1:24:90.02:90,0,155	0/1:17,0:17:68.89:69,0,80	0/1:27,3:30:99:184,0,143	0/1:15,0:15:54.84:55,0,99	0/1:4,2:6:38.71:90,0,39	0/1:6,1:7:24.39:134,0,24	0/1:6,1:7:38.41:69,0,38	0/1:15,1:16:27.83:28,0,103	0/1:5,0:5:4.38:77,0,4	0/1:19,0:19:60.36:164,0,60	0/0:18,0:18:51.17:0,51,761	0/0:16,1:17:48.06:0,48,712	0/1:12,2:14:66.85:88,0,67	0/1:19,0:19:11.39:11,0,170	0/1:18,0:18:65.83:66,0,148	0/0:7,0:7:0.06:0,0,64
chr10	68996450	.	A	ATGACAGTT	12075.59	PASS	AB=0.588;AC=35;AF=0.648;AN=54;BaseQRankSum=-5.629;DP=204;FS=46.967;HRun=0;HaplotypeScore=51.8261;InbreedingCoeff=0.8011;MQ=76.62;MQ0=1;MQRankSum=-9.274;QD=100.63;ReadPosRankSum=-3.036;VQSLOD=2.7536;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:2,0:2:6.02:0,6,133	1/1:0,3:3:9.03:387,9,0	0/0:8,0:8:15.62:0,16,518	0/0:8,0:7:6.45:0,6,178	0/0:10,0:10:30.10:0,30,784	1/1:1,3:4:12:407,12,0	1/1:0,4:4:12.04:516,12,0	1/1:8,6:14:30.10:1045,30,0	1/1:3,4:7:21.07:847,21,0	0/0:9,0:9:24.07:0,24,595	0/0:22,0:22:51.17:0,51,1345	1/1:1,2:3:9.03:386,9,0	1/1:3,1:4:9.03:368,9,0	1/1:0,7:7:18.06:774,18,0	1/1:1,6:7:21.07:902,21,0	1/1:0,5:5:15.05:645,15,0	1/1:1,5:6:6.02:172,6,0	0/0:12,0:12:33.11:0,33,895	1/1:4,4:9:24.06:678,24,0	1/1:2,7:9:27.05:1013,27,0	./.	1/1:1,3:4:12.04:474,12,0	0/0:5,0:5:12.04:0,12,326	0/0:7,0:6:18.06:0,18,488	1/1:1,10:11:33.11:1380,33,0	0/1:3,5:10:51.27:921,0,51	1/1:1,8:9:21.07:903,21,0	1/1:2,2:4:6.02:258,6,0
chr10	68998837	.	CACATACAT	C	2583.34	PASS	AB=0.931;AC=9;AF=0.161;AN=56;BaseQRankSum=12.088;DP=805;FS=2.442;HRun=0;HaplotypeScore=200.5033;InbreedingCoeff=0.8481;MQ=62.42;MQ0=3;MQRankSum=0.537;QD=20.67;ReadPosRankSum=-4.401;VQSLOD=2.5195;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:63.15:0,63,1975	0/0:13,0:13:33.11:0,33,1322	0/0:29,0:17:14.35:0,14,149	0/0:33,0:25:13.04:0,13,338	0/0:34,0:34:75.23:0,75,2576	0/0:31,0:31:75.24:0,75,2655	0/0:33,0:33:72.19:0,72,2381	1/1:10,23:33:69:896,69,0	0/0:28,0:28:69.21:0,69,2441	1/1:8,18:25:45.13:1025,45,0	1/1:3,20:23:39.12:481,39,0	0/0:31,0:31:69.20:0,69,2531	0/0:32,0:32:69.20:0,69,2388	0/0:22,0:22:54.17:0,54,2007	0/0:49,0:49:99:0,129,4668	0/0:35,0:35:81.22:0,81,2738	0/0:37,0:37:72.16:0,72,2271	1/1:4,12:16:12.04:309,12,0	0/0:28,0:28:45.04:0,45,1442	0/0:30,0:31:63.19:0,63,2258	0/0:32,0:31:60.17:0,60,1949	0/0:31,0:31:84.26:0,84,3007	0/0:28,0:28:49.41:0,49,1756	0/0:16,0:16:20.75:0,21,675	0/0:28,0:28:66.19:0,66,2293	0/1:25,2:27:35.97:36,0,2143	0/0:31,0:31:75.21:0,75,2650	0/0:20,0:20:42.14:0,42,1478
chr10	68999557	.	A	AGT	3610.39	PASS	AB=0.825;AC=40;AF=0.769;AN=52;BaseQRankSum=-2.250;DP=694;FS=2.619;HRun=0;HaplotypeScore=100.8935;InbreedingCoeff=0.0330;MQ=69.38;MQ0=7;MQRankSum=0.159;QD=6.27;ReadPosRankSum=-2.966;VQSLOD=2.5734;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:38,0:38:5.99:48,6,0	0/1:2,0:3:5.14:42,0,5	./.	./.	1/1:11,1:17:2.73:12,3,0	1/1:18,4:23:2.26:44,2,0	1/1:15,7:23:18.06:269,18,0	1/1:37,0:36:21.09:115,21,0	0/1:14,4:18:10.80:164,0,11	1/1:19,11:31:24.47:284,24,0	0/1:17,0:17:26.78:37,0,27	0/1:13,13:26:3:340,0,3	1/1:16,11:27:15.05:224,15,0	1/1:13,5:19:9.03:135,9,0	1/1:15,10:27:9.03:135,9,0	1/1:23,13:36:33.11:493,33,0	0/1:24,12:38:71.43:242,0,71	1/1:24,0:27:20.54:159,21,0	1/1:15,0:15:3.01:40,3,0	0/1:14,6:20:21.43:129,0,21	0/1:29,6:35:74.65:75,0,83	1/1:11,6:19:3.01:45,3,0	0/0:15,0:15:20.89:0,21,211	0/0:28,0:32:35.74:0,36,349	1/1:13,3:18:3.01:45,3,0	1/1:20,9:30:34.15:368,34,0	0/1:17,6:24:49.38:121,0,49	1/1:5,0:5:3.48:45,3,0
chr10	68999569	.	T	TGTGTGTGT	775.46	PASS	AB=1.000;AC=16;AF=0.308;AN=52;BaseQRankSum=-7.189;DP=680;FS=1.644;HRun=0;HaplotypeScore=159.4376;InbreedingCoeff=0.3225;MQ=58.10;MQ0=10;MQRankSum=-1.867;QD=3.02;ReadPosRankSum=-6.491;VQSLOD=0.2718;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:28,12:41:6.47:138,6,0	0/1:3,0:3:46.77:57,0,47	./.	./.	0/1:14,0:14:0:0,0,0	0/0:21,0:21:2.62:0,3,15	0/0:22,0:22:17.38:0,17,94	1/1:43,0:42:15.32:43,15,0	0/0:15,0:15:14.61:0,15,90	1/1:37,0:37:8.47:162,8,0	0/1:16,0:16:37.15:37,0,47	0/0:29,0:29:26.22:0,26,200	0/0:25,0:25:14.16:0,14,77	0/1:18,0:18:10.09:10,0,23	0/0:23,0:23:8.68:0,9,47	0/0:37,0:37:31.24:0,31,168	0/0:35,0:35:26.08:0,26,318	1/1:29,0:28:7.27:248,7,0	0/0:11,0:11:2.97:0,3,20	0/1:22,0:22:31.49:31,0,91	0/0:36,0:35:14.79:0,15,201	0/0:16,0:16:2.90:0,3,16	0/0:18,0:17:21.07:0,21,504	0/0:32,0:32:36.10:0,36,810	0/0:17,0:17:2.90:0,3,16	0/1:30,0:29:30.82:160,0,31	0/0:24,0:24:8.69:0,9,178	1/1:4,0:3:3.90:46,4,0
chr10	69001290	.	G	GT	905.34	PASS	AB=0.929;AC=5;AF=0.089;AN=56;BaseQRankSum=-3.682;DP=610;FS=0.000;HRun=9;HaplotypeScore=58.5986;InbreedingCoeff=0.7997;MQ=67.06;MQ0=1;MQRankSum=0.977;QD=14.37;ReadPosRankSum=-0.606;VQSLOD=3.2874;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:71.94:0,72,620	0/0:12,0:12:32.99:0,33,286	0/1:12,0:9:0.29:0,0,65	0/0:13,0:10:14.25:0,14,149	0/0:24,0:24:62.95:0,63,544	0/0:20,0:20:53.98:0,54,469	0/0:24,0:24:59.97:0,60,521	0/0:23,0:23:47.61:0,48,395	0/0:20,0:20:31.96:0,32,444	1/1:9,17:26:5.04:511,5,0	1/1:2,20:24:30.68:505,31,0	0/0:24,0:24:62.99:0,63,546	0/0:30,0:30:77.93:0,78,669	0/0:26,0:26:65.98:0,66,573	0/0:28,0:28:77.95:0,78,669	0/0:21,1:22:29.81:0,30,487	0/0:28,0:28:74.97:0,75,647	0/0:20,0:20:53.98:0,54,469	0/0:21,0:21:44.91:0,45,379	0/0:22,0:22:56.97:0,57,494	0/0:17,0:17:35.98:0,36,312	0/0:20,1:21:26.81:0,27,462	0/0:14,0:14:29.98:0,30,260	0/0:16,0:16:41.97:0,42,358	0/0:25,0:25:44.04:0,44,456	0/0:26,1:27:41.79:0,42,590	0/0:24,0:24:68.99:0,69,599	0/0:18,0:18:35.97:0,36,312
chr10	69001923	.	G	GA	1154.48	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=4.211;DP=583;FS=4.510;HRun=10;HaplotypeScore=66.2908;InbreedingCoeff=0.8781;MQ=66.54;MQ0=1;MQRankSum=-1.625;QD=11.32;ReadPosRankSum=-4.889;VQSLOD=1.9466;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:86.83:0,87,707	0/0:13,0:13:29.94:0,30,246	0/0:19,0:18:21.42:0,21,171	0/1:13,0:12:7.85:8,0,109	0/0:11,0:11:29.96:0,30,246	0/0:20,1:21:21.93:0,22,386	0/0:18,1:19:21.99:0,22,387	1/1:6,1:26:50.35:263,50,0	0/0:21,1:22:21.92:0,22,387	1/1:3,0:19:46.12:277,46,0	1/1:2,0:8:17.08:86,17,0	0/0:27,0:28:67.92:0,68,545	0/0:17,0:17:38.62:0,39,307	0/0:19,0:19:38.92:0,39,320	0/0:27,0:27:65.89:0,66,542	0/0:21,0:21:56.93:0,57,468	0/0:25,0:25:43.12:0,43,515	1/1:9,25:34:66.10:683,66,0	0/0:20,0:20:50.92:0,51,419	0/0:14,0:14:35.95:0,36,296	0/0:21,1:22:27.94:0,28,436	0/0:22,0:22:53.21:0,53,442	0/0:15,0:15:35.95:0,36,295	0/0:29,0:29:74.85:0,75,611	0/0:23,0:24:36.52:0,37,380	0/0:20,0:21:36.55:0,37,380	0/0:27,0:28:73.92:0,74,594	0/0:10,0:10:29.97:0,30,246
chr10	69004206	.	GT	G	893.47	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.975;DP=666;FS=2.999;HRun=9;HaplotypeScore=64.2815;InbreedingCoeff=0.9132;MQ=65.12;MQ0=0;MQRankSum=1.175;QD=20.31;ReadPosRankSum=0.375;VQSLOD=4.1552;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:87.22:0,87,989	0/0:8,0:8:21.06:0,21,242	0/0:22,0:15:22.35:0,22,251	0/0:25,2:21:3.01:0,3,257	0/0:26,0:26:69.19:0,69,786	0/0:22,0:21:63.19:0,63,727	0/0:22,0:23:60.01:0,60,672	0/0:35,0:35:90.27:0,90,1037	0/0:29,0:29:81.22:0,81,922	1/1:6,22:27:66.03:604,66,0	1/1:1,15:16:45.02:411,45,0	0/0:23,0:24:66.03:0,66,741	0/0:23,0:23:63.18:0,63,717	0/0:19,0:19:51.15:0,51,588	0/0:29,0:29:81.24:0,81,934	0/0:26,0:26:66.20:0,66,762	0/0:30,0:30:78.23:0,78,900	0/0:26,0:26:72.04:0,72,796	0/0:22,0:22:54.16:0,54,623	0/0:25,0:25:75.22:0,75,865	0/0:13,0:13:36.11:0,36,415	0/0:16,0:16:45.12:0,45,510	0/0:28,0:28:78.21:0,78,879	0/0:27,0:26:69.13:0,69,760	0/0:21,0:21:63.19:0,63,727	0/0:31,0:30:84.25:0,84,969	0/0:30,0:30:87.24:0,87,993	0/0:10,0:10:30.07:0,30,334
chr10	69004786	.	A	AGCTC	5701.85	PASS	AB=1.000;AC=35;AF=0.648;AN=54;BaseQRankSum=0.630;DP=637;FS=1.246;HRun=0;HaplotypeScore=113.8416;InbreedingCoeff=0.7567;MQ=81.43;MQ0=34;MQRankSum=-1.510;QD=15.62;ReadPosRankSum=2.153;VQSLOD=4.7747;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:18:14.93:0,15,301	1/1:7,0:7:5.93:43,6,0	0/0:60,0:30:39.57:0,40,473	0/0:82,0:38:71.57:0,72,650	0/1:12,0:12:1.94:2,0,129	1/1:23,0:22:44.72:413,45,0	1/1:30,0:28:68.08:609,68,0	0/0:39,0:39:99:0,105,967	./.	0/0:15,0:15:32.57:0,33,354	0/0:10,0:10:18.01:0,18,211	1/1:18,0:17:32.83:333,33,0	1/1:15,0:15:24.42:242,24,0	1/1:17,0:17:21.70:254,22,0	1/1:26,0:26:18:422,18,0	1/1:16,0:16:39.58:288,40,0	1/1:34,0:34:72.86:846,73,0	0/0:15,0:14:17.97:0,18,167	1/1:13,0:13:0.03:195,0,0	0/1:20,0:20:0.96:213,0,1	1/1:29,0:26:13.12:416,13,0	1/1:17,0:17:35.81:321,36,0	0/0:13,0:13:11.11:0,11,179	0/1:20,0:20:12.54:13,0,181	1/1:10,0:9:23.93:235,24,0	1/1:24,0:21:23.73:463,24,0	1/1:27,0:26:32.69:254,33,0	1/1:7,0:7:19.72:141,20,0
chr10	69004787	.	GCT	G	71.12	PASS	AB=1.000;AC=9;AF=0.188;AN=48;BaseQRankSum=-3.738;DP=671;FS=1.449;HRun=0;HaplotypeScore=112.3432;InbreedingCoeff=0.4410;MQ=77.64;MQ0=36;MQRankSum=0.924;QD=0.44;ReadPosRankSum=1.432;VQSLOD=1.7182;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:26:14.97:0,15,123	./.	./.	0/1:81,0:37:0.04:0,0,0	0/0:15,0:15:2.99:0,3,24	0/0:25,0:24:14.99:0,15,133	0/0:32,0:29:17.54:0,18,140	./.	./.	1/1:15,0:15:10.61:92,11,0	1/1:10,0:10:8.98:73,9,0	0/0:19,0:17:6:0,6,58	0/0:17,0:17:19.81:0,20,131	0/0:18,0:18:8.93:0,9,66	0/0:26,0:26:14.98:0,15,123	0/0:16,0:16:11.99:0,12,100	0/0:35,0:35:41.73:0,42,323	1/1:7,9:14:2.69:16,3,0	0/0:17,0:17:14.65:0,15,114	0/1:20,0:20:5.64:6,0,83	0/0:31,0:28:4.13:0,4,153	0/0:17,0:17:8.99:0,9,74	0/0:17,0:17:5.98:0,6,47	0/1:21,0:21:5.61:6,0,89	0/0:11,0:10:8.99:0,9,74	0/0:26,0:23:32.83:0,33,268	0/0:28,0:27:11.53:0,12,102	0/0:8,0:8:2.92:0,3,17
chr10	69004790	.	C	CGCTC	5710.73	PASS	AB=1.000;AC=36;AF=0.643;AN=56;BaseQRankSum=1.263;DP=726;FS=1.243;HRun=0;HaplotypeScore=131.8191;InbreedingCoeff=0.7441;MQ=72.11;MQ0=37;MQRankSum=-0.457;QD=12.61;ReadPosRankSum=2.263;VQSLOD=4.5432;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:31:14.66:0,15,301	1/1:9,0:9:5.93:43,6,0	0/0:57,0:27:39.57:0,40,473	0/0:77,0:33:71.57:0,72,650	0/1:18,0:18:1.94:2,0,129	1/1:26,0:25:44.81:413,45,0	1/1:35,0:32:68.08:610,68,0	0/0:38,0:38:99:0,106,969	0/1:21,0:20:0:0,0,0	0/0:20,0:20:33.90:0,34,357	0/0:12,0:12:18.01:0,18,211	1/1:19,0:17:32.83:333,33,0	1/1:19,0:20:24.88:243,25,0	1/1:22,0:22:21.70:255,22,0	1/1:27,0:27:18:422,18,0	1/1:17,0:17:38.69:285,39,0	1/1:34,0:34:73.13:848,73,0	0/0:17,0:15:17.97:0,18,167	1/1:21,0:21:0.91:201,1,0	0/1:21,0:21:0.96:213,0,1	1/1:37,0:34:13.12:416,13,0	1/1:18,0:17:35.81:321,36,0	0/0:19,0:19:11.11:0,11,179	0/1:23,0:23:12.54:13,0,181	1/1:16,0:14:24.40:235,24,0	1/1:32,0:29:22.94:462,23,0	1/1:20,6:27:33.58:256,34,0	1/1:9,0:9:19.72:141,20,0
chr10	69004830	.	C	CTGTG	307.60	PASS	AB=1.000;AC=4;AF=0.077;AN=52;BaseQRankSum=4.801;DP=590;FS=2.124;HRun=0;HaplotypeScore=131.9941;InbreedingCoeff=0.1933;MQ=44.99;MQ0=28;MQRankSum=0.242;QD=4.27;ReadPosRankSum=-0.504;VQSLOD=2.5944;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:29:33.08:0,33,470	0/0:15,0:15:17.32:0,17,170	./.	./.	0/0:23,0:23:24.08:0,24,386	0/0:20,0:20:20.22:0,20,244	0/0:26,0:23:26.31:0,26,309	0/0:26,0:26:27.25:0,27,327	0/0:22,0:20:12.81:0,13,136	0/1:24,0:24:99:249,0,148	1/1:15,11:25:0.97:3,1,0	0/0:19,0:17:27.96:0,28,418	0/0:16,0:16:32.88:0,33,355	0/0:16,0:16:17.78:0,18,219	0/0:30,0:30:25.92:0,26,448	0/0:20,0:20:46.97:0,47,624	0/0:39,0:39:69:0,69,889	0/1:22,0:19:50.43:146,0,50	0/0:19,0:18:44.45:0,44,459	0/0:22,0:22:36.74:0,37,495	0/0:35,0:31:30.39:0,30,423	0/0:16,0:15:19.77:0,20,266	0/0:13,0:12:9.11:0,9,101	0/0:22,0:22:16.30:0,16,155	0/0:21,0:17:30.37:0,30,441	0/0:29,0:27:75.61:0,76,940	0/0:24,0:23:40.59:0,41,532	0/0:10,0:7:12.39:0,12,119
chr10	69005078	.	G	GT	124.46	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.074;DP=650;FS=0.000;HRun=0;HaplotypeScore=65.4993;InbreedingCoeff=0.9423;MQ=90.14;MQ0=0;MQRankSum=-5.114;QD=13.83;ReadPosRankSum=0.848;VQSLOD=4.6393;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,108,1509	0/0:3,0:3:9.03:0,9,126	0/0:26,0:26:78.21:0,78,1037	0/0:27,0:27:72.21:0,72,959	0/0:15,0:15:45.11:0,45,605	0/0:23,0:23:69.23:0,69,965	0/0:20,0:20:57.16:0,57,763	0/0:34,0:34:96.32:0,96,1341	0/0:20,0:20:60.20:0,60,839	0/0:22,0:22:63.21:0,63,880	0/0:15,0:15:45.15:0,45,628	0/0:26,0:26:78.25:0,78,1074	0/0:25,0:25:72.24:0,72,1007	0/0:20,0:20:60.17:0,60,803	0/0:33,0:33:99:0,99,1380	0/0:25,0:25:75.25:0,75,1049	0/0:30,0:30:90.29:0,90,1240	1/1:0,9:9:26.74:218,27,0	0/0:22,0:22:66.16:0,66,853	0/0:24,0:24:72.24:0,72,1006	0/0:47,0:47:99:0,138,1876	0/0:22,0:22:63.20:0,63,863	0/0:26,0:26:75.25:0,75,1049	0/0:28,0:28:84.28:0,84,1165	0/0:16,0:16:48.16:0,48,670	0/0:24,0:24:69.23:0,69,962	0/0:23,0:23:66.21:0,66,902	0/0:8,0:8:24.08:0,24,336
chr10	69005079	.	GAAGCA	G	309.46	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.021;DP=647;FS=0.000;HRun=0;HaplotypeScore=118.6781;InbreedingCoeff=0.9424;MQ=90.12;MQ0=0;MQRankSum=-5.124;QD=34.38;ReadPosRankSum=0.847;VQSLOD=3.4139;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,111,3551	0/0:3,0:3:9.03:0,9,300	0/0:26,0:26:75.26:0,75,2394	0/0:26,0:26:75.25:0,75,2201	0/0:15,0:15:45.11:0,45,1390	0/0:23,0:23:69.24:0,69,2290	0/0:19,0:19:57.20:0,57,1893	0/0:34,0:34:99:0,99,3211	0/0:20,0:20:60.21:0,60,1990	0/0:22,0:22:63.22:0,63,2093	0/0:16,0:16:45.15:0,45,1489	0/0:26,0:26:78.27:0,78,2514	0/0:25,0:25:75.26:0,75,2491	0/0:21,0:21:63.22:0,63,2041	0/0:33,0:33:99:0,99,3189	0/0:25,0:25:75.26:0,75,2498	0/0:29,0:29:87.28:0,87,2794	1/1:0,9:9:27.06:403,27,0	0/0:23,0:23:69.23:0,69,2080	0/0:24,0:24:72.25:0,72,2336	0/0:44,0:44:99:0,132,4342	0/0:22,0:22:66.23:0,66,2155	0/0:27,0:27:81.28:0,81,2595	0/0:28,0:28:84.25:0,84,2667	0/0:16,0:16:48.16:0,48,1598	0/0:23,0:23:69.24:0,69,2294	0/0:23,0:23:69.17:0,69,1990	0/0:8,0:8:24.08:0,24,784
chr10	69007086	.	TA	T	711.70	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.633;DP=587;FS=7.520;HRun=10;HaplotypeScore=55.7219;InbreedingCoeff=0.9366;MQ=69.44;MQ0=1;MQRankSum=0.017;QD=17.79;ReadPosRankSum=0.463;VQSLOD=4.0172;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:33:96.08:0,96,1034	0/0:13,0:14:33.08:0,33,358	0/0:8,0:7:15.04:0,15,163	0/0:10,1:9:8.22:0,8,98	0/0:37,0:37:99:0,102,1127	0/0:20,0:20:54.15:0,54,597	0/0:19,0:19:57.11:0,57,609	0/0:43,2:46:58.99:0,59,1068	0/0:18,0:18:45.11:0,45,488	1/1:4,18:22:53.99:469,54,0	1/1:4,14:18:41.98:365,42,0	0/0:13,0:13:33.09:0,33,365	0/0:15,0:15:39.02:0,39,415	0/0:15,0:16:44.95:0,45,479	0/0:26,1:28:54.97:0,55,800	0/0:30,0:30:81.22:0,81,896	0/0:25,0:25:63.17:0,63,697	0/0:28,0:28:78.19:0,78,848	0/0:15,0:15:27.06:0,27,289	0/0:28,0:28:75.17:0,75,804	0/0:17,0:18:41.95:0,42,445	0/0:13,2:15:16.06:0,16,405	0/0:21,1:22:34.06:0,34,584	0/0:12,0:12:30.07:0,30,325	0/0:24,0:24:72.19:0,72,796	0/0:22,0:22:60.16:0,60,664	0/0:26,0:26:66.14:0,66,711	0/0:4,0:4:12.03:0,12,133
chr10	69007983	.	A	ACT	806.66	PASS	AB=0.979;AC=33;AF=0.750;AN=44;BaseQRankSum=-0.949;DP=565;FS=25.099;HRun=0;HaplotypeScore=91.8522;InbreedingCoeff=0.1720;MQ=68.31;MQ0=12;MQRankSum=0.698;QD=1.98;ReadPosRankSum=-3.312;VQSLOD=-0.3823;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:23:9.02:109,9,0	./.	./.	0/1:33,0:16:0:0,0,0	1/1:18,0:19:3:27,3,0	1/1:21,0:21:9.02:110,9,0	1/1:20,5:26:2.82:43,3,0	./.	1/1:17,2:22:3.01:44,3,0	1/1:20,0:20:6.48:55,6,0	1/1:18,0:18:2.99:24,3,0	0/0:14,0:14:2.87:0,3,31	0/1:15,0:16:8.11:37,0,8	1/1:22,0:22:3.01:42,3,0	0/1:23,1:26:18.88:38,0,19	0/1:18,0:19:5.10:76,0,5	./.	0/0:11,0:14:5.68:0,6,28	1/1:27,0:26:10.94:81,11,0	./.	1/1:17,0:17:2.60:10,3,0	1/1:15,0:15:3.01:43,3,0	./.	0/0:22,0:22:2.03:0,2,6	0/1:18,0:17:0.01:0,0,0	1/1:24,0:24:11.86:94,12,0	1/1:21,0:21:3.01:42,3,0	1/1:21,0:21:6.87:46,7,0
chr10	69008355	.	GT	G	2630.65	PASS	AB=0.931;AC=7;AF=0.125;AN=56;BaseQRankSum=9.771;DP=666;FS=11.076;HRun=1;HaplotypeScore=64.5599;InbreedingCoeff=0.8884;MQ=86.90;MQ0=0;MQRankSum=-0.616;QD=26.57;ReadPosRankSum=-2.879;VQSLOD=1.7632;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,123,1957	0/0:11,0:11:33.11:0,33,527	0/0:22,0:22:59.36:0,59,932	0/0:22,0:22:63.07:0,63,902	0/0:32,0:32:90.29:0,90,1414	0/0:27,0:27:81.28:0,81,1294	0/0:27,0:27:81.28:0,81,1289	1/1:0,27:27:81.24:1095,81,0	0/0:26,0:26:78.24:0,78,1199	1/1:0,27:27:78.22:1053,78,0	1/1:0,18:18:45.15:624,45,0	0/0:25,0:25:75.24:0,75,1172	0/0:18,0:18:51.16:0,51,792	0/0:25,0:25:72.23:0,72,1128	0/0:28,0:28:81.24:0,81,1244	0/0:25,0:25:75.24:0,75,1170	0/0:31,0:31:93.30:0,93,1458	0/0:8,0:8:24.08:0,24,383	0/0:15,0:15:45.15:0,45,700	0/0:33,0:33:99:0,99,1579	0/0:41,0:41:99:0,117,1865	0/0:19,0:19:57.09:0,57,873	0/0:14,0:14:42.12:0,42,646	0/0:29,0:29:87.30:0,87,1385	0/0:17,0:17:48.16:0,48,767	0/1:25,2:27:2.61:3,0,1113	0/0:23,0:23:69.24:0,69,1098	0/0:8,0:8:24.08:0,24,383
chr10	69009678	.	GAA	G	1315.51	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.793;DP=794;FS=3.402;HRun=2;HaplotypeScore=92.3218;InbreedingCoeff=0.9703;MQ=80.04;MQ0=0;MQRankSum=0.559;QD=42.44;ReadPosRankSum=-4.763;VQSLOD=2.3099;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:70,0:70:99:0,211,4187	0/0:14,0:14:42.14:0,42,853	0/0:22,0:22:57.62:0,58,991	0/0:21,0:21:48.16:0,48,871	0/0:27,0:27:81.27:0,81,1611	0/0:20,0:20:60.21:0,60,1214	0/0:26,0:26:78.16:0,78,1538	1/1:1,30:31:90.28:1410,90,0	0/0:40,0:40:99:0,120,2416	0/0:33,0:33:99:0,99,1891	0/0:18,0:18:54.19:0,54,1085	0/0:39,0:39:99:0,117,2303	0/0:34,0:34:99:0,102,2012	0/0:41,0:41:99:0,123,2427	0/0:32,0:32:96.33:0,96,1940	0/0:30,0:30:90.29:0,90,1753	0/0:24,0:24:69.24:0,69,1390	0/0:24,0:24:72.25:0,72,1461	0/0:14,0:14:42.14:0,42,810	0/0:25,0:25:69.24:0,69,1384	0/0:31,0:31:93.28:0,93,1812	0/0:29,0:29:84.29:0,84,1694	0/0:29,0:29:87.30:0,87,1737	0/0:33,0:33:99:0,99,1960	0/0:19,0:19:57.20:0,57,1145	0/0:37,0:37:99:0,111,2211	0/0:27,0:27:81.28:0,81,1640	0/0:4,0:4:12.04:0,12,244
chr10	69010997	.	CA	C	3063.78	PASS	AB=0.766;AC=33;AF=0.589;AN=56;BaseQRankSum=9.880;DP=865;FS=87.356;HRun=1;HaplotypeScore=163.9850;InbreedingCoeff=0.5141;MQ=36.75;MQ0=96;MQRankSum=-7.575;QD=8.15;ReadPosRankSum=-0.458;VQSLOD=-0.3643;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:45:99:0,99,1586	1/1:4,4:7:9.50:120,10,0	0/0:99,0:7:15.05:0,15,214	0/0:99,0:12:7.09:0,7,135	0/0:20,0:19:44.17:0,44,664	1/1:14,6:13:20.94:215,21,0	0/1:33,8:20:74.52:118,0,75	0/0:41,1:29:75.17:0,75,1046	1/1:9,7:10:8.82:116,9,0	0/1:30,5:24:99:200,0,218	0/1:9,2:13:21.69:70,0,22	1/1:10,12:17:20.83:245,21,0	1/1:9,5:11:1.79:164,2,0	1/1:9,9:14:14.97:157,15,0	1/1:12,11:18:23.75:264,24,0	1/1:8,9:12:24.04:291,24,0	0/1:17,4:16:5.20:138,0,5	0/1:6,1:6:18.40:117,0,18	0/0:18,1:9:12.31:0,12,168	1/1:7,7:13:5.66:79,6,0	0/0:62,5:45:4.57:0,5,43	1/1:12,13:22:6.23:134,6,0	0/0:14,0:14:32.87:0,33,444	0/0:74,0:70:99:0,146,2173	1/1:8,12:15:19.12:246,19,0	1/1:16,9:14:5.32:291,5,0	1/1:4,6:8:14.77:143,15,0	1/1:3,3:6:14.71:154,15,0
chr10	69011061	.	AC	A	2374.99	PASS	AB=0.900;AC=21;AF=0.404;AN=52;BaseQRankSum=7.710;DP=1823;DS;FS=123.740;HRun=2;HaplotypeScore=267.3040;InbreedingCoeff=-0.5462;MQ=20.14;MQ0=584;MQRankSum=-4.634;QD=1.61;ReadPosRankSum=-0.016;VQSLOD=0.3399;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:70,3:41:23.99:0,24,612	0/1:24,3:8:64.17:64,0,78	./.	./.	0/0:52,0:19:11.69:0,12,148	0/1:64,14:34:28.62:163,0,29	0/1:118,12:55:9.99:10,0,295	0/1:75,4:27:99:136,0,218	0/1:49,14:25:9.47:260,0,9	0/1:99,5:34:99:133,0,430	0/1:31,1:13:12:12,0,41	0/1:64,9:37:50.45:151,0,50	0/1:36,8:22:73.62:106,0,74	0/1:62,8:29:82.10:156,0,82	1/1:57,13:29:28.01:307,28,0	0/1:46,7:23:99:177,0,126	0/1:62,6:31:50.71:51,0,353	0/1:37,1:14:20.98:21,0,152	0/1:31,8:20:99:142,0,240	0/0:45,5:22:0.60:0,1,45	0/1:238,9:115:66.97:67,0,442	0/1:48,11:34:44.29:62,0,44	0/1:38,1:19:38.22:38,0,100	0/0:112,5:71:69.52:0,70,926	0/1:39,12:30:66.07:181,0,66	0/1:89,10:35:99:290,0,388	0/0:28,1:7:5.98:0,6,57	0/0:23,0:9:9.84:0,10,67
chr10	69011076	.	AC	A	1756.15	PASS	AB=0.906;AC=22;AF=0.423;AN=52;BaseQRankSum=9.944;DP=1809;DS;FS=92.183;HRun=2;HaplotypeScore=265.2960;InbreedingCoeff=-0.2974;MQ=18.61;MQ0=694;MQRankSum=-2.751;QD=1.52;ReadPosRankSum=0.690;VQSLOD=-0.2512;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:75,1:33:52.57:53,0,301	0/1:34,2:9:63.19:63,0,112	./.	./.	0/0:49,1:17:1.11:0,1,7	0/1:66,14:35:17.75:218,0,18	0/1:147,16:59:23.30:23,0,153	0/0:49,3:14:8.38:0,8,60	1/1:58,15:24:18.72:213,19,0	0/0:92,5:27:28.18:0,28,519	0/0:36,4:17:6.15:0,6,45	0/1:61,12:30:53.43:136,0,53	0/1:41,9:23:99:141,0,107	0/1:49,11:22:46.21:121,0,46	1/1:52,16:21:25.42:280,25,0	0/1:49,9:21:47.67:152,0,48	0/1:60,5:29:60.38:60,0,409	0/1:43,2:18:42.87:43,0,186	0/1:27,2:15:1.88:2,0,223	0/0:44,6:21:3.38:0,3,77	0/0:237,13:107:41.57:0,42,469	1/1:45,10:33:7.36:59,7,0	0/1:31,1:11:5.24:5,0,72	0/0:107,4:59:47.71:0,48,611	0/1:42,8:28:22.73:152,0,23	0/1:83,6:24:99:109,0,283	0/1:23,3:8:24.19:24,0,44	0/1:23,2:12:58.44:58,0,119
chr10	69011077	.	CCA	C	294.54	PASS	AB=0.977;AC=16;AF=0.308;AN=52;BaseQRankSum=4.417;DP=1815;DS;FS=4.190;HRun=0;HaplotypeScore=277.6091;InbreedingCoeff=-0.2929;MQ=18.48;MQ0=710;MQRankSum=-2.721;QD=0.25;ReadPosRankSum=-1.509;VQSLOD=2.0768;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:68,3:31:8.62:9,0,237	0/0:35,1:9:13.39:0,13,82	./.	./.	0/0:51,0:17:3.46:0,3,25	0/0:79,0:35:3.06:0,3,84	0/1:166,0:61:17.59:18,0,79	1/1:49,1:10:3:25,3,0	0/0:72,2:26:10.04:0,10,58	0/0:96,0:26:33.39:0,33,282	0/1:39,1:17:14.07:14,0,32	0/1:71,1:29:27.06:27,0,30	0/1:52,0:24:6.11:6,0,81	0/0:58,0:21:2.93:0,3,46	0/1:70,0:21:7.70:8,0,12	0/0:57,1:21:14.32:0,14,116	0/0:63,2:29:5.20:0,5,456	0/1:44,2:18:50.55:117,0,51	0/1:27,2:15:99:107,0,173	0/1:48,1:21:13.08:13,0,29	0/1:235,11:108:29.69:30,0,282	0/0:56,0:33:4.54:0,5,26	0/0:32,0:11:3.01:0,3,35	0/1:111,2:60:1.43:1,0,300	0/1:51,0:28:0.28:1,0,0	0/1:88,1:24:23.69:24,0,151	0/1:27,0:9:31.69:32,0,85	0/0:23,0:11:10.19:0,10,54
chr10	69011102	.	A	ATG	301.84	PASS	AB=0.989;AC=14;AF=0.269;AN=52;BaseQRankSum=5.166;DP=1997;DS;FS=36.736;HRun=0;HaplotypeScore=276.8374;InbreedingCoeff=-0.1779;MQ=17.07;MQ0=976;MQRankSum=-5.809;QD=0.31;ReadPosRankSum=-0.935;VQSLOD=1.3865;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:89,0:30:40.38:0,40,530	0/0:41,0:10:18.86:0,19,225	./.	./.	0/0:47,0:16:3.01:0,3,46	0/0:84,0:31:5.95:0,6,238	0/1:153,0:47:15.55:16,0,216	0/1:87,0:4:1.66:2,0,2	0/0:80,0:21:11.74:0,12,101	0/1:95,3:21:99:143,0,456	0/1:45,2:19:32.88:85,0,33	0/1:78,1:30:21.03:21,0,148	0/0:60,0:24:17.35:0,17,181	0/1:66,0:20:2.57:3,0,52	0/1:86,1:24:7.66:8,0,63	0/1:60,1:18:42.18:42,0,73	0/0:70,0:26:52.47:0,52,688	0/1:48,0:17:3.97:4,0,264	0/1:74,0:11:6.44:6,0,237	0/1:52,0:19:42.77:48,0,43	0/0:242,0:92:42.81:0,43,510	1/1:59,0:34:1.39:17,1,0	0/0:36,0:11:9.03:0,9,140	0/0:116,0:55:41.54:0,42,636	0/1:58,0:27:37.08:43,0,37	0/0:94,0:22:41.14:0,41,461	0/0:37,0:10:6.26:0,6,90	0/0:27,0:13:18.31:0,18,240
chr10	69011107	.	CCA	C	517.25	PASS	AB=0.983;AC=19;AF=0.365;AN=52;BaseQRankSum=6.105;DP=1946;DS;FS=30.032;HRun=0;HaplotypeScore=241.4187;InbreedingCoeff=-0.2214;MQ=16.67;MQ0=988;MQRankSum=-3.779;QD=0.44;ReadPosRankSum=-3.297;VQSLOD=0.4800;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:78,3:25:29.37:0,29,441	0/1:40,1:8:30.14:30,0,56	./.	./.	0/0:46,0:15:6.02:0,6,97	0/0:79,0:29:0.30:0,0,157	0/1:144,2:40:26:26,0,168	1/1:91,1:6:2.61:33,3,0	0/1:73,0:18:1.67:57,0,2	0/1:98,0:21:74.99:75,0,204	0/0:43,1:18:2.18:0,2,5	0/1:76,0:28:2.58:3,0,63	0/1:59,1:24:18.72:19,0,110	0/1:65,0:20:9:9,0,44	0/1:85,1:21:4.94:5,0,18	0/1:56,0:16:17.99:43,0,18	0/1:63,3:23:73.41:73,0,318	0/1:45,1:16:28.10:158,0,28	0/0:87,0:10:3.77:0,4,138	0/0:48,0:16:4.27:0,4,41	0/0:229,2:88:10.61:0,11,303	0/1:47,3:29:0.22:0,0,1	0/0:35,0:11:12.04:0,12,177	0/0:109,0:51:22.98:0,23,574	0/1:55,2:25:22.05:42,0,22	0/1:92,0:18:4.39:4,0,161	1/1:39,0:9:12.27:50,12,0	0/1:25,1:12:31.19:31,0,92
chr10	69011115	.	ACACACAC	A	2857.14	PASS	AB=0.971;AC=24;AF=0.462;AN=52;BaseQRankSum=4.362;DP=1961;DS;FS=62.285;HRun=0;HaplotypeScore=255.1125;InbreedingCoeff=-0.1952;MQ=17.35;MQ0=957;MQRankSum=-3.445;QD=1.96;ReadPosRankSum=-0.966;VQSLOD=0.3242;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:84,0:27:30.44:0,30,813	0/1:46,0:9:69.60:133,0,70	./.	./.	0/0:48,0:18:12.04:0,12,355	0/1:76,0:26:99:222,0,212	0/1:139,0:36:99:229,0,110	0/0:102,0:7:5.78:0,6,37	1/1:73,1:19:2.60:175,3,0	0/1:104,0:29:99:117,0,879	1/1:47,0:21:1.57:11,2,0	0/1:69,2:25:39.67:198,0,40	0/1:51,4:22:99:329,0,137	0/1:56,4:22:98.83:208,0,99	0/1:80,8:24:1.41:121,0,1	0/1:49,2:15:12.60:385,0,13	0/0:63,0:23:8.96:0,9,564	0/0:47,0:15:4.26:0,4,148	0/1:96,1:9:51.70:52,0,212	0/1:45,2:19:17.36:17,0,63	0/1:234,1:82:0.67:1,0,340	1/1:48,0:30:2.69:36,3,0	0/0:36,0:13:21.07:0,21,517	0/0:110,0:56:66.66:0,67,1491	1/1:61,0:30:0.05:211,0,0	0/1:87,7:18:99:183,0,331	1/1:36,1:10:17.45:323,17,0	0/1:28,0:12:56.70:57,0,198
chr10	69011120	.	CACCACACA	C	1180.03	PASS	AB=0.990;AC=20;AF=0.385;AN=52;BaseQRankSum=4.774;DP=1820;DS;FS=37.973;HRun=0;HaplotypeScore=251.1207;InbreedingCoeff=-0.4811;MQ=17.81;MQ0=867;MQRankSum=-1.997;QD=0.96;ReadPosRankSum=1.588;VQSLOD=1.6036;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:80,0:28:40.07:0,40,981	0/1:42,0:10:10.19:10,0,35	./.	./.	0/0:47,0:18:15.05:0,15,466	0/1:67,0:23:42.11:42,0,274	0/1:131,0:35:44.25:44,0,191	0/1:97,0:10:22.77:23,0,43	0/1:63,0:16:21.49:87,0,21	0/1:91,3:29:99:368,0,990	0/0:35,1:19:2.49:0,2,7	0/1:61,0:23:47.18:47,0,146	0/1:51,1:24:85.49:85,0,278	0/1:58,0:21:34.72:35,0,68	0/1:76,0:20:9.73:10,0,33	0/1:46,0:12:99:160,0,106	0/1:57,0:18:36.74:37,0,723	0/1:43,0:14:66.41:66,0,73	0/1:95,0:9:6.63:7,0,192	0/1:45,1:20:54.39:54,0,58	0/0:220,1:75:15.93:0,16,369	0/0:42,1:28:4.45:0,4,45	0/0:32,0:13:20.99:0,21,610	0/0:107,0:56:45.66:0,46,1808	0/1:54,1:30:20.38:162,0,20	0/1:82,0:17:26.76:27,0,312	1/1:33,0:8:7.98:55,8,0	0/1:25,1:11:12.75:13,0,197
chr10	69011121	.	AC	A	1836.61	PASS	AB=0.923;AC=23;AF=0.442;AN=52;BaseQRankSum=5.764;DP=1788;DS;FS=94.564;HRun=2;HaplotypeScore=216.4898;InbreedingCoeff=-0.2506;MQ=18.00;MQ0=845;MQRankSum=-2.997;QD=1.62;ReadPosRankSum=1.366;VQSLOD=-0.4317;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:81,1:29:38.23:0,38,483	0/1:37,3:10:69.60:94,0,70	./.	./.	0/0:44,0:18:15.05:0,15,208	0/1:59,6:23:99:120,0,150	0/1:120,9:34:96.34:96,0,133	0/1:94,5:10:8.89:83,0,9	0/1:55,6:16:60.46:65,0,60	0/1:85,7:29:99:164,0,332	1/1:26,10:19:1.53:19,2,0	0/1:53,6:22:52.57:120,0,53	0/1:44,8:23:99:267,0,123	0/1:52,5:20:60.74:128,0,61	0/1:75,2:20:1.61:77,0,2	0/1:38,5:12:15.31:206,0,15	0/0:56,0:18:31.62:0,32,439	0/1:42,2:13:14.20:14,0,88	0/0:92,1:9:0.20:0,0,152	0/1:35,9:19:17.68:18,0,41	0/0:209,12:76:9.91:0,10,307	1/1:31,13:28:5.15:44,5,0	0/0:32,0:13:21.07:0,21,300	0/0:104,1:55:69.93:0,70,904	1/1:42,11:29:2.07:173,2,0	0/1:77,2:17:84.05:84,0,133	1/1:27,4:8:18.04:198,18,0	0/1:24,1:11:20.61:21,0,122
chr10	69011173	.	CCA	C	1780.66	PASS	AB=0.788;AC=21;AF=0.375;AN=56;BaseQRankSum=3.613;DP=816;DS;FS=0.000;HRun=0;HaplotypeScore=176.8191;InbreedingCoeff=-0.1096;MQ=33.73;MQ0=81;MQRankSum=-4.664;QD=3.97;ReadPosRankSum=3.277;VQSLOD=2.7148;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:26:49.41:0,49,757	0/1:13,6:16:99:187,0,120	0/0:79,1:12:12.54:0,13,107	0/0:96,0:8:20.44:0,20,200	0/0:21,0:21:48.16:0,48,789	0/1:7,3:9:28.74:29,0,65	0/1:21,10:23:47.75:130,0,48	0/0:31,0:27:49.67:0,50,714	0/1:15,6:15:88.07:88,0,88	0/1:31,7:31:99:306,0,251	1/1:16,12:27:5.94:76,6,0	0/1:16,5:16:99:143,0,105	0/1:18,3:18:20.74:21,0,177	0/1:10,3:11:26.08:26,0,82	0/0:21,5:20:4.20:0,4,45	0/1:11,7:14:90.31:178,0,90	0/0:5,1:2:3:0,3,26	0/0:3,0:1:2.74:0,3,12	0/0:19,0:9:6.91:0,7,93	0/1:22,5:24:84.30:84,0,172	1/1:70,8:43:2.76:38,3,0	1/1:18,11:28:7.44:110,7,0	0/0:17,0:15:30.01:0,30,478	0/0:37,1:36:37.35:0,37,1067	0/1:24,9:31:52.55:171,0,53	0/1:29,10:26:99:243,0,164	0/1:7,6:9:1.41:1,0,34	1/1:3,3:6:8.71:113,9,0
chr10	69011186	.	CATG	C	134.90	PASS	AB=0.989;AC=11;AF=0.196;AN=56;BaseQRankSum=8.189;DP=720;DS;FS=37.034;HRun=0;HaplotypeScore=168.3802;InbreedingCoeff=-0.0880;MQ=34.40;MQ0=75;MQRankSum=-5.128;QD=0.76;ReadPosRankSum=2.493;VQSLOD=1.0950;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:29:59.45:0,59,1372	0/1:17,1:17:22.91:23,0,184	0/0:96,0:16:30.01:0,30,467	0/0:113,0:10:23.70:0,24,498	0/0:20,0:20:54.39:0,54,1166	0/0:8,0:7:3:0,3,25	0/0:18,0:15:7.95:0,8,84	0/0:26,0:22:48.15:0,48,1090	0/1:17,0:13:33.22:45,0,33	0/0:31,0:31:20.70:0,21,754	0/0:23,0:22:3.78:0,4,53	0/1:16,0:16:1.47:1,0,143	0/1:17,0:17:27.60:49,0,28	0/1:11,0:11:3.36:3,0,4	1/1:16,0:13:3.99:11,4,0	0/1:17,0:13:26.29:26,0,77	0/0:4,1:3:2.84:0,3,14	0/0:3,0:2:0.71:0,1,14	0/0:8,0:4:9:0,9,160	0/0:16,1:17:10.18:0,10,114	0/0:52,1:34:3.57:0,4,27	0/0:24,0:25:13.04:0,13,139	0/0:17,0:15:38.81:0,39,918	0/0:39,0:36:74.82:0,75,1641	0/1:21,1:22:9.59:10,0,172	0/1:33,0:24:70:70,0,299	0/1:10,0:7:26.63:28,0,27	0/0:7,0:6:11.99:0,12,110
chr10	69011187	.	ATGC	A	932.39	PASS	AB=0.845;AC=19;AF=0.339;AN=56;BaseQRankSum=7.379;DP=692;DS;FS=68.356;HRun=0;HaplotypeScore=157.6037;InbreedingCoeff=-0.1583;MQ=34.56;MQ0=75;MQRankSum=-5.946;QD=3.85;ReadPosRankSum=-2.740;VQSLOD=-0.1130;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:29:58.43:0,58,1406	0/1:15,2:17:99:113,0,261	0/0:92,0:17:29.34:0,29,453	0/0:109,0:10:23.12:0,23,501	0/0:20,0:20:54.34:0,54,1133	0/1:8,0:7:26.05:31,0,26	0/1:16,1:15:42.66:43,0,133	0/0:25,0:20:45.15:0,45,1020	0/1:14,3:13:47.39:127,0,47	0/1:27,2:30:42.74:43,0,808	0/0:19,3:22:2.80:0,3,72	0/1:9,3:13:69.56:70,0,137	0/1:10,3:13:14.95:174,0,15	0/1:7,3:10:11.68:73,0,12	1/1:13,1:12:7.78:49,8,0	0/1:12,2:11:68.57:69,0,74	1/1:5,0:3:1.55:4,2,0	1/1:2,0:1:1.55:4,2,0	0/0:7,0:3:6.02:0,6,146	0/1:11,4:15:76.06:76,0,140	0/0:39,0:35:3.46:0,3,44	0/0:19,2:23:13.65:0,14,183	0/0:16,0:15:38.95:0,39,894	0/0:36,0:35:71.44:0,71,1676	0/1:15,3:21:24.22:24,0,239	0/1:26,5:23:99:147,0,316	0/1:9,1:7:5.08:44,0,5	0/0:6,0:5:12.03:0,12,143
chr10	69011191	.	ACACCACACAC	A	1880.48	PASS	AB=0.860;AC=17;AF=0.304;AN=56;BaseQRankSum=7.924;DP=692;DS;FS=30.347;HRun=0;HaplotypeScore=190.9897;InbreedingCoeff=-0.1940;MQ=32.66;MQ0=75;MQRankSum=-6.614;QD=7.52;ReadPosRankSum=0.376;VQSLOD=0.8838;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:32:72.60:0,73,2945	0/1:15,2:17:99:153,0,473	0/0:96,0:16:41.62:0,42,1027	0/0:111,0:10:27.09:0,27,843	0/0:18,0:18:51.18:0,51,2286	0/0:8,0:7:6.02:0,6,164	0/1:16,1:15:99:132,0,225	0/0:23,0:17:42.13:0,42,1368	0/1:13,3:13:99:221,0,105	0/1:27,0:29:20.32:20,0,1364	0/0:20,0:22:3.36:0,3,102	0/1:10,3:12:99:223,0,229	0/1:11,3:14:60.73:300,0,61	0/1:7,3:10:85.04:101,0,85	1/1:12,1:11:2.77:55,3,0	0/1:12,2:10:99:155,0,234	0/0:4,0:2:2.84:0,3,14	1/1:3,0:2:2.60:10,3,0	0/0:12,0:7:12.04:0,12,177	0/1:13,4:16:55.51:56,0,277	0/0:53,0:38:9.13:0,9,98	0/1:22,2:23:7.66:8,0,177	0/0:17,0:16:38.63:0,39,1730	0/0:34,0:31:78.21:0,78,3346	0/1:20,3:23:99:117,0,507	0/1:23,5:20:99:413,0,652	0/1:9,1:7:4.67:71,0,5	0/0:6,0:5:15.05:0,15,481
chr10	69011194	.	CCA	C	1071	PASS	AB=0.769;AC=27;AF=0.482;AN=56;BaseQRankSum=7.649;DP=659;DS;FS=13.436;HRun=0;HaplotypeScore=141.7395;InbreedingCoeff=0.4178;MQ=32.77;MQ0=79;MQRankSum=-6.305;QD=4.12;ReadPosRankSum=2.771;VQSLOD=2.3348;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,1:32:37.34:0,37,870	1/1:9,5:14:17.61:161,18,0	0/0:96,0:16:35.90:0,36,425	0/0:110,1:9:20.98:0,21,282	0/0:19,0:19:43.68:0,44,656	1/1:5,2:6:3.01:37,3,0	1/1:13,0:11:3.15:35,3,0	0/0:23,1:16:27.02:0,27,379	1/1:9,1:8:11.08:75,11,0	0/1:20,7:28:7.43:286,0,7	0/1:14,9:23:0.07:0,0,0	1/1:12,1:12:5.75:50,6,0	1/1:9,2:11:2.38:12,2,0	0/1:7,2:9:0.08:0,0,0	0/0:5,1:5:0:0,0,0	1/1:10,4:10:13.43:105,13,0	0/0:1,1:2:2.60:0,3,10	0/0:3,0:2:2.04:0,2,6	0/0:11,0:5:5.95:0,6,42	0/1:9,4:13:0.06:0,0,0	0/0:50,0:37:1.39:0,1,35	1/1:17,8:24:2.76:20,3,0	0/1:16,1:16:4.21:4,0,455	0/0:36,0:33:69.22:0,69,1054	1/1:14,6:22:17.19:155,17,0	0/1:15,8:16:20.85:180,0,21	1/1:6,4:5:5.69:48,6,0	0/1:2,4:5:30.37:65,0,30
chr10	69011202	.	A	AT	126.37	PASS	AB=0.849;AC=4;AF=0.071;AN=56;BaseQRankSum=-1.921;DP=682;DS;FS=0.000;HRun=0;HaplotypeScore=154.1074;InbreedingCoeff=0.1921;MQ=30.35;MQ0=83;MQRankSum=-1.846;QD=1.24;ReadPosRankSum=-1.385;VQSLOD=2.5376;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:32:65.53:0,66,907	0/0:13,0:13:23.83:0,24,148	0/0:94,0:15:42.09:0,42,538	0/0:109,0:8:24.08:0,24,335	0/0:18,0:17:48.63:0,49,657	0/0:7,0:6:5.85:0,6,55	0/0:23,0:18:14.50:0,14,124	0/1:24,1:15:8.78:9,0,407	0/0:10,0:9:11.20:0,11,60	0/0:27,2:28:19.73:0,20,530	0/0:23,0:23:5.79:0,6,75	0/0:11,0:10:14.63:0,15,111	0/0:11,0:11:14.01:0,14,95	0/0:11,0:11:10.85:0,11,88	0/0:9,0:7:2.94:0,3,20	0/0:13,0:12:19.17:0,19,117	0/0:7,0:3:2.99:0,3,29	0/0:3,0:2:2.88:0,3,15	0/1:9,5:5:27.07:87,0,27	0/0:15,0:12:11.93:0,12,109	1/1:57,4:44:5.27:130,5,0	0/0:27,0:26:9.99:0,10,93	0/0:16,1:16:38.35:0,38,484	0/0:34,0:32:78.73:0,79,1084	0/0:22,0:22:28.26:0,28,223	0/0:22,0:18:45.72:0,46,356	0/0:11,0:5:5.58:0,6,27	0/0:6,0:5:14.67:0,15,131
chr10	69011210	.	ATG	A	37.07	PASS	AB=0.844;AC=8;AF=0.143;AN=56;BaseQRankSum=3.949;DP=612;FS=9.971;HRun=0;HaplotypeScore=137.5010;InbreedingCoeff=-0.0542;MQ=32.19;MQ0=68;MQRankSum=-2.966;QD=0.32;ReadPosRankSum=-0.118;VQSLOD=2.1535;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,1:30:64.51:0,65,1161	0/0:10,0:10:11.45:0,11,117	0/0:90,0:15:35.44:0,35,495	0/0:111,2:11:24.74:0,25,275	0/0:18,0:17:4.19:0,4,769	0/1:3,0:3:3.90:4,0,31	0/0:16,1:13:8.97:0,9,93	0/0:25,1:15:36.08:0,36,610	0/1:5,2:8:9.08:9,0,35	0/1:19,0:19:20.13:20,0,300	0/0:18,0:19:5.58:0,6,57	0/1:7,0:6:23.19:23,0,31	0/0:8,0:8:2.71:0,3,16	0/0:8,0:8:0.98:0,1,3	0/1:5,1:5:0.03:0,0,0	0/1:8,2:10:48.55:64,0,49	0/1:6,2:5:5.54:28,0,6	0/0:2,0:2:3.01:0,3,30	0/0:10,0:4:9.03:0,9,117	0/0:16,0:14:11.13:0,11,100	0/1:33,19:37:0.57:1,0,62	0/0:24,0:23:11:0,11,90	0/0:15,0:14:31.74:0,32,498	0/0:38,0:36:46.32:0,46,1215	0/0:14,0:14:2.92:0,3,111	0/0:19,0:16:8.81:0,9,269	0/0:9,0:3:1.02:0,1,14	0/0:6,0:4:6.60:0,7,69
chr10	69011217	.	CCA	C	510	PASS	AB=0.873;AC=19;AF=0.352;AN=54;BaseQRankSum=5.939;DP=682;FS=14.361;HRun=0;HaplotypeScore=143.5528;InbreedingCoeff=0.2522;MQ=30.75;MQ0=89;MQRankSum=-5.570;QD=2.79;ReadPosRankSum=0.069;VQSLOD=1.4258;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,1:34:17.60:0,18,666	1/1:7,3:10:13.03:78,13,0	0/0:80,0:13:5.04:0,5,38	0/0:104,0:11:6:0,6,117	0/0:16,1:16:33.11:0,33,527	0/1:4,0:3:0:0,0,0	0/0:22,0:15:7.23:0,7,35	0/0:33,0:15:20.85:0,21,358	1/1:8,3:10:5.56:52,6,0	0/1:20,3:20:47.33:91,0,47	1/1:17,2:18:5.87:40,6,0	1/1:10,1:8:3.59:28,4,0	0/0:8,0:8:1.48:0,1,5	0/0:12,1:11:3.01:0,3,35	0/0:12,0:6:2.98:0,3,35	0/1:10,1:10:16.15:32,0,16	0/1:11,2:7:23.76:48,0,24	0/0:7,0:5:2.58:0,3,10	./.	0/0:17,0:16:8.14:0,8,73	0/0:73,0:47:3.90:0,4,45	1/1:22,3:24:8.77:95,9,0	0/0:14,0:12:17.63:0,18,255	0/0:38,0:37:24.89:0,25,785	0/1:13,3:13:5.24:73,0,5	0/1:19,4:18:67.58:68,0,90	1/1:10,1:3:5.64:25,6,0	0/1:4,2:4:40.44:40,0,41
chr10	69011261	.	CCA	C	44.73	PASS	AB=0.982;AC=8;AF=0.154;AN=52;BaseQRankSum=3.742;DP=1803;DS;FS=7.356;HRun=0;HaplotypeScore=222.5776;InbreedingCoeff=-0.0127;MQ=19.03;MQ0=679;MQRankSum=-2.414;QD=0.10;ReadPosRankSum=-0.281;VQSLOD=1.9241;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:90,1:41:40.11:0,40,493	0/0:19,1:9:5.99:0,6,49	./.	./.	0/0:29,0:19:13.04:0,13,166	0/0:47,0:20:4.41:0,4,67	0/0:133,0:55:25.98:0,26,268	0/0:131,0:28:0.30:0,0,368	0/0:55,0:22:10.18:0,10,78	0/1:76,2:30:56.16:56,0,294	0/0:28,1:15:1.24:0,1,4	0/0:63,0:29:19.77:0,20,200	0/0:39,0:17:27.08:0,27,328	0/1:50,2:21:43.32:43,0,78	0/1:52,0:17:23.05:23,0,40	0/1:58,1:18:10.70:11,0,85	0/0:72,0:31:18.73:0,19,420	0/0:56,0:25:48.58:0,49,634	0/1:94,0:16:5.12:5,0,258	0/0:32,0:17:11.71:0,12,85	0/0:248,0:100:18.92:0,19,233	0/0:40,0:25:7.12:0,7,78	0/0:35,0:19:11.96:0,12,106	0/0:125,0:64:46.23:0,46,707	1/1:36,1:15:2.72:12,3,0	0/1:76,0:31:14.98:15,0,463	0/0:27,0:11:20.82:0,21,235	0/0:27,0:11:9.03:0,9,137
chr10	69011360	.	CCA	C	209.14	PASS	AB=0.982;AC=20;AF=0.385;AN=52;BaseQRankSum=3.467;DP=1566;DS;FS=7.933;HRun=0;HaplotypeScore=195.1353;InbreedingCoeff=-0.1354;MQ=19.24;MQ0=579;MQRankSum=-2.536;QD=0.24;ReadPosRankSum=-1.345;VQSLOD=1.5553;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:70,1:37:20.07:0,20,311	0/0:24,0:3:3.47:0,3,10	./.	./.	0/0:43,0:18:18.06:0,18,265	0/1:41,2:25:21.28:21,0,22	0/1:85,2:36:16.92:37,0,17	0/1:124,0:18:1.26:1,0,376	0/0:48,1:25:8.24:0,8,94	0/1:84,1:22:9.85:10,0,202	1/1:25,0:7:2.60:10,3,0	0/1:52,1:25:16.60:17,0,53	0/1:42,1:24:20:20,0,100	0/1:49,0:23:6.44:6,0,12	0/0:56,1:21:6.42:0,6,65	0/1:42,0:18:6.82:7,0,21	0/1:58,0:28:41.27:80,0,41	0/0:42,0:16:19.14:0,19,198	1/1:41,1:12:4.25:35,4,0	0/0:33,0:10:0.47:0,0,1	0/0:227,5:88:0.99:0,1,46	1/1:38,0:18:0.23:2,0,0	0/0:31,0:9:18.06:0,18,290	0/0:95,0:45:42.03:0,42,562	1/1:41,0:12:0.67:4,1,0	0/1:74,2:31:69.85:70,0,118	0/1:26,0:8:18.75:19,0,21	0/1:24,0:8:7.55:8,0,88
chr10	69011386	.	CACAT	C	255.13	PASS	AB=0.960;AC=12;AF=0.222;AN=54;BaseQRankSum=5.937;DP=1051;DS;FS=35.290;HRun=0;HaplotypeScore=171.8968;InbreedingCoeff=-0.2433;MQ=25.93;MQ0=207;MQRankSum=-5.262;QD=0.52;ReadPosRankSum=-1.689;VQSLOD=1.3513;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:49,2:30:23.89:0,24,1113	0/0:5,0:3:2.93:0,3,80	0/0:58,0:2:4.57:0,5,84	0/0:50,0:4:8.26:0,8,104	0/0:23,0:16:27.07:0,27,533	0/1:35,1:23:32.73:33,0,77	0/1:65,4:34:0.93:1,0,363	0/0:71,0:26:21.24:0,21,984	0/1:26,0:19:41.97:42,0,143	0/1:43,0:20:28.22:28,0,476	./.	0/1:29,1:18:15.57:16,0,119	0/0:30,0:24:5.86:0,6,246	0/1:28,2:20:15.41:15,0,106	0/0:27,2:18:7.13:0,7,214	0/0:27,0:15:7.89:0,8,455	0/1:36,1:27:99:117,0,185	0/0:31,1:13:3.82:0,4,213	0/0:24,0:11:5.46:0,5,437	1/1:20,0:10:0.76:2,1,0	0/1:136,9:67:4.95:5,0,169	0/0:21,0:13:1.50:0,2,55	0/0:15,0:9:23.92:0,24,634	0/0:66,0:42:1.63:0,2,919	0/0:23,0:10:6.02:0,6,162	0/1:37,1:22:99:104,0,352	0/0:19,0:10:13.40:0,13,159	0/1:9,0:4:21.08:21,0,106
chr10	69011394	.	CACCCTA	C	510.19	PASS	AB=0.977;AC=15;AF=0.268;AN=56;BaseQRankSum=6.706;DP=822;DS;FS=42.011;HRun=0;HaplotypeScore=167.4617;InbreedingCoeff=-0.2916;MQ=28.91;MQ0=89;MQRankSum=-6.436;QD=1.21;ReadPosRankSum=-0.315;VQSLOD=0.9017;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:28:33.57:0,34,1335	0/0:2,0:1:3.01:0,3,64	0/0:58,0:2:3.90:0,4,42	0/0:51,0:4:6.12:0,6,106	0/0:13,0:11:24.08:0,24,649	0/1:25,3:19:67.83:128,0,68	0/0:47,0:27:13.50:0,14,320	0/0:40,0:24:21.74:0,22,964	0/1:18,2:16:38.15:38,0,100	0/1:25,0:16:60.86:61,0,345	1/1:9,0:4:1.82:5,2,0	0/1:24,1:16:34.84:35,0,71	0/1:28,0:23:7.74:8,0,171	0/0:25,1:18:3.63:0,4,128	0/1:29,0:19:2.12:2,0,213	0/1:29,1:17:20.50:21,0,453	0/1:31,0:25:99:158,0,128	0/1:29,0:13:81.73:82,0,284	0/1:17,0:11:5.60:6,0,580	0/0:13,0:10:4.93:0,5,24	0/1:111,1:62:23.34:23,0,184	0/0:11,0:10:3.01:0,3,39	0/0:14,0:10:27.09:0,27,760	0/0:49,1:42:55.64:0,56,1386	0/0:19,0:10:9.42:0,9,179	0/1:29,0:21:57.55:58,0,419	0/0:19,0:12:14.01:0,14,165	0/1:7,0:4:29.99:30,0,101
chr10	69011395	.	ACCC	A	790.15	PASS	AB=0.963;AC=21;AF=0.375;AN=56;BaseQRankSum=5.377;DP=807;DS;FS=0.574;HRun=3;HaplotypeScore=154.1582;InbreedingCoeff=-0.4868;MQ=29.01;MQ0=85;MQRankSum=-3.581;QD=1.26;ReadPosRankSum=0.251;VQSLOD=-0.4046;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:32,3:27:37.69:38,0,901	0/0:3,0:2:3.01:0,3,58	0/0:58,0:2:4.83:0,5,54	0/1:51,0:4:2.32:2,0,94	0/0:12,0:11:24.08:0,24,512	0/1:28,0:19:37.64:38,0,75	0/1:44,2:27:12.39:12,0,338	0/1:31,2:20:99:139,0,730	0/1:18,0:15:38.84:39,0,145	0/1:24,0:16:85.05:85,0,302	1/1:8,0:4:2.94:18,3,0	0/1:25,2:17:15.84:16,0,86	0/1:26,0:23:99:100,0,143	0/1:24,0:17:59.50:59,0,108	0/1:31,0:19:51.60:52,0,152	0/1:28,2:18:82.94:83,0,333	0/1:31,0:25:2.77:3,0,202	0/1:26,0:12:29.10:29,0,237	0/0:14,0:11:23.56:0,24,476	0/1:13,0:10:13.06:26,0,13	0/1:107,5:64:21.81:22,0,204	0/0:12,0:11:3.90:0,4,42	0/0:14,0:10:27.09:0,27,568	0/0:48,1:41:58.89:0,59,1160	0/0:19,0:10:8.99:0,9,166	0/1:27,1:21:99:105,0,364	0/1:17,1:11:55.90:56,0,140	0/1:7,0:4:22.14:22,0,70
chr10	69011396	.	CCCT	C	1684.70	PASS	AB=0.865;AC=21;AF=0.375;AN=56;BaseQRankSum=5.634;DP=782;DS;FS=10.864;HRun=0;HaplotypeScore=146.6058;InbreedingCoeff=-0.5040;MQ=29.44;MQ0=80;MQRankSum=-6.370;QD=2.78;ReadPosRankSum=-0.686;VQSLOD=2.0807;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:34,1:28:7.15:7,0,821	0/0:3,0:2:3.01:0,3,50	0/0:58,0:2:4.82:0,5,33	0/1:51,0:4:2.73:3,0,87	0/0:12,0:11:27.01:0,27,499	0/1:23,4:19:46.98:102,0,47	0/1:33,9:25:43.76:44,0,268	0/1:21,6:19:99:214,0,611	0/1:17,2:15:53.26:53,0,114	0/1:16,5:15:99:206,0,198	1/1:7,1:4:3.01:42,3,0	0/1:22,3:17:34.34:54,0,34	0/1:24,4:22:92.03:163,0,92	0/1:20,3:16:60.88:61,0,84	0/1:25,6:19:99:117,0,125	0/1:26,6:19:99:110,0,258	0/1:26,3:23:60.96:61,0,125	0/1:27,2:15:99:191,0,181	0/0:12,2:11:9.63:0,10,427	0/1:10,3:10:10.47:50,0,10	0/1:87,21:61:61.30:61,0,159	0/0:9,2:11:3.85:0,4,22	0/0:13,0:10:27.06:0,27,534	0/0:46,1:39:50.93:0,51,1017	0/0:15,3:9:6.91:0,7,119	0/1:21,2:19:99:163,0,257	0/1:11,7:11:94.72:95,0,113	0/1:6,3:6:42.58:43,0,45
chr10	69011397	.	CCT	C	1080.87	PASS	AB=0.896;AC=24;AF=0.429;AN=56;BaseQRankSum=6.776;DP=770;DS;FS=50.194;HRun=0;HaplotypeScore=143.1826;InbreedingCoeff=-0.4484;MQ=29.72;MQ0=79;MQRankSum=-5.619;QD=1.76;ReadPosRankSum=-1.718;VQSLOD=0.9410;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,4:25:23.99:0,24,653	0/0:2,1:2:3.01:0,3,35	0/1:58,0:2:6.13:6,0,6	0/0:50,0:4:6.46:0,6,69	0/0:12,0:11:21.07:0,21,324	0/1:26,1:19:20.57:78,0,21	0/1:36,6:25:16.23:16,0,110	0/1:23,2:18:61.83:62,0,425	0/1:15,4:15:44.03:74,0,44	0/1:20,2:15:92.42:92,0,182	1/1:8,1:5:2.96:19,3,0	1/1:23,4:19:4.89:61,5,0	0/1:23,4:21:34.23:64,0,34	0/1:20,5:17:21.42:21,0,72	0/1:25,6:20:52.29:52,0,69	0/1:31,3:20:99:105,0,163	0/1:23,6:23:36.21:163,0,36	0/1:22,7:15:99:146,0,127	0/1:11,2:11:52.71:53,0,286	0/1:10,1:9:11.29:11,0,12	0/1:87,18:59:33.56:34,0,92	0/1:12,0:11:0:0,0,0	0/0:13,0:10:23.97:0,24,360	0/0:39,4:35:7.42:0,7,597	0/1:13,4:8:8.95:9,0,75	0/1:21,2:19:99:140,0,194	0/1:16,1:11:19.63:20,0,44	0/1:10,0:7:6.75:7,0,55
chr10	69012664	.	G	GCACACACACACACACA	17420.46	PASS	AB=0.683;AC=43;AF=0.768;AN=56;BaseQRankSum=0.149;DP=635;FS=0.000;HRun=0;HaplotypeScore=293.9966;InbreedingCoeff=0.6915;MQ=55.27;MQ0=3;MQRankSum=-9.983;QD=37.38;ReadPosRankSum=-4.251;VQSLOD=2.7670;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:46:69.39:0,69,2408	1/1:3,2:6:3.01:228,3,0	0/0:29,0:17:8.99:0,9,94	0/0:31,0:16:6.02:0,6,194	0/0:21,0:24:54.17:0,54,2052	1/1:25,1:29:4.15:132,4,0	1/1:27,0:27:11.97:607,12,0	0/1:22,0:40:99:180,0,712	1/1:13,4:19:14.99:964,15,0	1/1:22,0:23:42.11:2052,42,0	1/1:13,0:13:12.03:294,12,0	1/1:10,1:12:12.04:568,12,0	1/1:18,4:26:29.99:1758,30,0	1/1:9,3:12:9.03:683,9,0	1/1:21,4:26:9.03:684,9,0	1/1:24,4:28:20.82:1254,21,0	1/1:18,1:19:16.29:660,16,0	1/1:25,0:25:27.09:1115,27,0	1/1:23,0:22:36.08:1396,36,0	1/1:26,3:33:6.02:436,6,0	1/1:10,0:10:2.99:24,3,0	1/1:8,1:9:6.02:379,6,0	0/0:20,0:23:35.89:0,36,1352	0/0:16,0:16:33.11:0,33,1301	1/1:12,3:17:6.02:397,6,0	1/1:19,0:19:24.08:1126,24,0	1/1:19,7:30:29.13:1848,29,0	1/1:11,0:12:16.78:636,17,0
chr10	69012731	.	A	AT	781.60	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-7.902;DP=416;FS=2.660;HRun=6;HaplotypeScore=87.7306;InbreedingCoeff=0.7900;MQ=63.97;MQ0=2;MQRankSum=2.765;QD=26.05;ReadPosRankSum=-3.149;VQSLOD=2.4335;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:57.02:0,57,551	0/0:7,0:7:21.05:0,21,212	0/0:9,0:7:8.89:0,9,61	0/0:8,0:6:7.96:0,8,48	0/0:20,0:20:54.07:0,54,528	0/0:25,0:25:63.06:0,63,621	0/0:8,0:8:14.95:0,15,132	1/1:5,25:30:78.12:876,78,0	0/0:6,0:6:15.03:0,15,152	0/0:16,0:16:45.09:0,45,449	0/0:21,0:21:60.13:0,60,610	0/0:9,0:9:24.05:0,24,244	0/0:12,0:12:27.03:0,27,265	0/0:7,0:7:21.04:0,21,213	0/0:14,0:14:38.97:0,39,360	0/0:25,0:25:63.08:0,63,629	0/0:25,0:25:71.98:0,72,692	0/0:25,0:25:63.02:0,63,617	0/0:15,0:15:42.05:0,42,410	0/0:23,0:22:60.06:0,60,591	0/0:3,0:3:9.02:0,9,92	0/0:7,0:7:17.99:0,18,168	0/0:10,0:10:27.02:0,27,255	0/0:9,0:9:24.52:0,25,240	0/0:25,0:25:66.02:0,66,646	0/0:10,0:10:30.06:0,30,300	0/0:16,0:16:27.02:0,27,265	0/0:5,0:5:14.95:0,15,126
chr10	69012763	.	T	TA	638.54	PASS	AB=0.896;AC=6;AF=0.107;AN=56;BaseQRankSum=1.275;DP=460;FS=0.638;HRun=2;HaplotypeScore=80.2231;InbreedingCoeff=0.5508;MQ=63.25;MQ0=3;MQRankSum=2.252;QD=12.05;ReadPosRankSum=-2.567;VQSLOD=1.3003;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:60.20:0,60,839	0/1:10,1:11:0.80:1,0,107	0/0:17,0:8:6.35:0,6,143	0/0:14,0:9:18.22:0,18,178	0/0:24,0:24:69.23:0,69,964	0/0:26,0:26:68.79:0,69,393	0/0:9,0:9:26.43:0,26,160	0/0:28,0:27:72.23:0,72,970	0/0:9,0:9:22.87:0,23,128	1/1:2,16:18:43.84:422,44,0	1/1:5,12:17:35.03:333,35,0	0/0:12,0:12:24.38:0,24,149	0/0:9,0:9:23.37:0,23,137	0/0:10,0:10:1.86:0,2,103	0/0:16,0:16:35.61:0,36,190	0/0:22,1:23:18.49:0,18,214	0/0:28,0:28:45.56:0,46,338	0/0:29,0:29:59.75:0,60,448	0/0:10,0:9:19.76:0,20,98	0/0:22,0:21:45.74:0,46,257	0/1:6,1:7:9.10:9,0,87	0/0:4,0:4:6.26:0,6,44	0/0:17,0:17:45.15:0,45,626	0/0:7,0:7:21.07:0,21,292	0/0:29,0:29:64.74:0,65,322	0/0:12,0:12:2.82:0,3,92	0/0:20,0:20:41.27:0,41,228	0/0:8,0:8:22.52:0,23,126
chr10	69013146	.	CCAGGGACG	C	30392.73	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=15.481;DP=657;FS=2.336;HRun=0;HaplotypeScore=191.3758;InbreedingCoeff=0.9913;MQ=76.80;MQ0=0;MQRankSum=-17.866;QD=64.67;ReadPosRankSum=6.139;VQSLOD=4.6785;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,108,4435	1/1:0,15:15:42.14:1167,42,0	0/0:19,0:19:51.15:0,51,1782	0/0:31,0:31:90.27:0,90,3057	0/0:15,0:15:42.14:0,42,1842	1/1:0,20:20:60.21:1695,60,0	1/1:1,28:29:63.22:1742,63,0	0/0:34,0:34:99:0,99,4089	1/1:2,18:20:51.18:1437,51,0	1/1:0,24:24:72.23:1944,72,0	1/1:1,25:26:60.21:1612,60,0	1/1:0,25:25:66.23:1864,66,0	1/1:4,30:34:68.83:1937,69,0	1/1:2,25:27:60.21:1682,60,0	1/1:1,21:22:60.21:1693,60,0	1/1:2,29:31:69.24:1950,69,0	1/1:3,24:27:54.19:1498,54,0	1/1:3,9:12:15.05:410,15,0	1/1:1,23:24:69.24:1912,69,0	1/1:0,25:24:57.14:1418,57,0	1/1:5,19:24:36.12:942,36,0	1/1:2,15:17:30.10:756,30,0	0/0:21,0:21:63.20:0,63,2548	0/0:29,0:29:87.30:0,87,3640	1/1:1,12:13:30.10:834,30,0	1/1:2,25:27:75.24:1998,75,0	1/1:1,22:23:57.20:1562,57,0	1/1:1,4:5:12.04:339,12,0
chr10	69013754	.	T	TGGGA	36764.57	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=-12.746;DP=770;FS=0.939;HRun=0;HaplotypeScore=113.8008;InbreedingCoeff=0.9995;MQ=84.75;MQ0=3;MQRankSum=-11.031;QD=68.59;ReadPosRankSum=4.034;VQSLOD=7.2554;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,147,2881	1/1:2,10:12:23.91:626,24,0	0/0:29,0:29:84.26:0,84,1568	0/0:28,0:28:81.28:0,81,1576	0/0:23,0:23:63.20:0,63,1208	1/1:3,18:22:54.19:1461,54,0	1/1:1,21:25:54.19:1506,54,0	0/0:34,0:34:93.21:0,93,1724	1/1:2,26:29:75.26:2095,75,0	1/1:9,20:31:84.27:2129,84,0	1/1:5,17:22:51.18:1425,51,0	1/1:2,28:31:90.31:2509,90,0	1/1:4,30:37:99:2865,105,0	1/1:4,16:20:51.18:1424,51,0	1/1:4,21:26:69.24:1882,69,0	1/1:5,30:35:93.28:2496,93,0	1/1:2,37:40:93.32:2600,93,0	1/1:3,16:19:51.18:1385,51,0	1/1:5,11:20:57.20:1383,57,0	1/1:3,20:26:63.09:1497,63,0	1/1:0,31:34:87.30:2404,87,0	1/1:2,14:17:42.14:1173,42,0	0/0:28,0:28:78.21:0,78,1434	0/0:40,0:40:99:0,117,2330	1/1:4,11:16:30.10:837,30,0	1/1:7,20:28:72.25:1929,72,0	1/1:4,18:22:57.20:1546,57,0	1/1:3,16:19:57.20:1593,57,0
chr10	69013868	.	CCAACAA	C	17223.50	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=12.652;DP=687;FS=1.532;HRun=0;HaplotypeScore=143.8179;InbreedingCoeff=0.9729;MQ=70.39;MQ0=0;MQRankSum=-13.775;QD=36.80;ReadPosRankSum=6.022;VQSLOD=4.7262;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,129,3955	1/1:0,13:13:30.10:606,30,0	0/0:31,0:24:52.01:0,52,1071	0/0:41,0:37:50.77:0,51,1741	0/0:16,0:16:39.10:0,39,1056	1/1:3,13:16:33.11:701,33,0	1/1:3,26:29:27.09:598,27,0	0/0:41,0:41:99:0,111,3094	1/1:2,31:31:60.20:1299,60,0	1/1:3,32:35:90.26:1683,90,0	1/1:1,11:12:33.11:583,33,0	1/1:2,20:22:42.14:931,42,0	1/1:1,21:22:39.13:863,39,0	1/1:2,15:17:30.10:634,30,0	1/1:4,21:25:45.15:996,45,0	1/1:2,25:26:56.96:1246,57,0	1/1:5,25:30:42.03:849,42,0	1/1:1,14:15:12.04:237,12,0	1/1:3,10:13:30.08:501,30,0	1/1:2,19:21:54.07:1010,54,0	1/1:5,27:32:17.99:279,18,0	1/1:6,11:17:21.07:379,21,0	0/0:13,0:13:36.12:0,36,1149	0/0:32,0:32:93.31:0,93,2931	1/1:1,19:20:39.13:778,39,0	1/1:2,26:28:78.24:1551,78,0	1/1:4,30:34:62.98:1365,63,0	1/1:0,7:7:6.02:133,6,0
chr10	69016016	.	GCT	G	5076.70	PASS	AB=0.987;AC=33;AF=0.589;AN=56;BaseQRankSum=16.178;DP=614;FS=1.772;HRun=0;HaplotypeScore=121.8944;InbreedingCoeff=0.6322;MQ=77.56;MQ0=1;MQRankSum=-4.120;QD=12.89;ReadPosRankSum=5.396;VQSLOD=4.7473;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,105,1986	0/1:9,0:9:37.15:76,0,37	0/0:23,0:21:59.19:0,59,865	0/1:13,0:13:53.10:53,0,148	0/0:33,0:33:99:0,99,1913	1/1:21,0:21:39.08:246,39,0	0/1:19,0:19:2.85:203,0,3	0/0:30,0:30:87.12:0,87,1623	1/1:18,0:18:20.10:227,20,0	0/0:18,0:18:54.19:0,54,1082	0/0:30,0:30:87.27:0,87,1680	1/1:17,1:18:11.43:208,11,0	0/1:20,0:20:19.72:243,0,20	1/1:11,1:12:20.59:150,21,0	1/1:29,0:29:70.42:435,70,0	0/1:23,0:23:13.25:246,0,13	1/1:25,0:24:67.53:425,68,0	0/0:21,0:21:57.14:0,57,1054	1/1:20,1:21:30.68:324,31,0	1/1:23,0:23:31.18:329,31,0	1/1:13,0:13:4.43:141,4,0	1/1:25,0:25:20.65:345,21,0	0/0:14,0:14:42.12:0,42,803	0/0:14,0:14:42.14:0,42,851	1/1:23,0:23:16.75:336,17,0	1/1:28,0:28:56.58:398,57,0	1/1:32,1:33:33.94:471,34,0	1/1:20,0:20:36.48:221,36,0
chr10	69016017	.	CTT	C	12475.75	PASS	AB=0.941;AC=37;AF=0.661;AN=56;BaseQRankSum=10.468;DP=615;FS=3.280;HRun=5;HaplotypeScore=98.2641;InbreedingCoeff=0.9474;MQ=78.18;MQ0=1;MQRankSum=-1.060;QD=31.66;ReadPosRankSum=3.521;VQSLOD=4.3466;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,99,1779	1/1:2,7:9:15.05:210,15,0	0/0:23,0:21:54.03:0,54,758	0/1:15,0:15:2.24:2,0,220	0/0:32,0:32:93.31:0,93,1666	1/1:0,20:21:42.13:573,42,0	1/1:2,17:19:42.14:588,42,0	0/0:31,0:31:87.28:0,87,1498	1/1:1,17:18:42.14:588,42,0	0/0:18,0:18:54.17:0,54,954	0/0:31,0:31:84.24:0,84,1486	1/1:2,16:18:33.11:458,33,0	1/1:3,17:20:45.15:630,45,0	1/1:1,11:12:21.07:291,21,0	1/1:0,29:29:72.24:1008,72,0	1/1:3,20:23:54.18:756,54,0	1/1:0,25:24:69.23:966,69,0	0/0:21,0:21:51.17:0,51,745	1/1:2,19:21:60.19:818,60,0	1/1:1,21:22:54.18:740,54,0	1/1:1,12:13:27.09:378,27,0	1/1:2,23:25:66.22:915,66,0	0/0:14,0:14:39.13:0,39,705	0/0:14,0:14:42.14:0,42,751	1/1:1,21:22:63.21:877,63,0	1/1:1,27:28:81.27:1124,81,0	1/1:3,30:33:74.88:1043,75,0	1/1:2,18:20:39.12:514,39,0
chr10	69016022	.	T	TA	343.38	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-3.625;DP=628;FS=0.000;HRun=10;HaplotypeScore=137.4776;InbreedingCoeff=0.8906;MQ=78.57;MQ0=1;MQRankSum=-0.234;QD=17.17;ReadPosRankSum=0.094;VQSLOD=2.3437;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:36:97.79:0,98,777	0/0:9,0:9:6.87:0,7,61	0/0:28,0:25:17.35:0,17,241	0/0:15,0:14:16.70:0,17,109	0/0:32,0:32:89.78:0,90,720	0/0:22,0:22:17.74:0,18,140	0/0:17,0:17:39.17:0,39,177	0/0:32,0:32:55.24:0,55,570	0/0:17,0:17:39.17:0,39,177	0/0:20,0:20:53.86:0,54,433	0/0:28,0:29:76.90:0,77,616	0/0:18,0:18:33.29:0,33,157	0/0:17,0:17:41.97:0,42,189	0/0:13,0:13:22.65:0,23,114	0/0:32,0:32:73.05:0,73,347	0/0:22,0:22:50.33:0,50,227	0/0:25,0:24:64.25:0,64,290	1/1:4,16:20:42.09:438,42,0	0/0:23,0:23:53.68:0,54,263	0/0:24,0:24:44.52:0,45,210	0/0:14,0:14:28.02:0,28,136	0/0:24,0:24:55.79:0,56,252	0/0:17,0:17:44.83:0,45,359	0/0:15,0:15:35.90:0,36,286	0/0:22,0:22:58.85:0,59,268	0/0:33,0:33:78.96:0,79,403	0/0:32,0:32:70.02:0,70,323	0/0:20,0:20:32.41:0,32,140
chr10	69016685	.	A	AGG	9597.95	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=16.694;DP=450;FS=54.597;HRun=1;HaplotypeScore=139.7483;InbreedingCoeff=0.9899;MQ=63.02;MQ0=0;MQRankSum=-16.827;QD=34.78;ReadPosRankSum=3.090;VQSLOD=1.5453;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,102,1589	1/1:0,7:7:21.04:240,21,0	0/0:24,0:24:69.22:0,69,1086	0/0:30,0:30:81.15:0,81,1233	0/0:33,0:33:99:0,99,1580	1/1:2,13:15:45.11:517,45,0	1/1:1,11:12:36.11:452,36,0	1/1:0,8:11:33.10:451,33,0	1/1:0,14:14:42.13:512,42,0	1/1:0,10:10:29.96:366,30,0	1/1:1,13:13:33.10:402,33,0	1/1:0,8:8:24.07:278,24,0	1/1:1,12:13:39.11:465,39,0	1/1:0,18:17:51.15:596,51,0	1/1:0,23:23:66.19:770,66,0	1/1:0,12:11:36.11:436,36,0	1/1:3,11:14:28.82:386,29,0	1/1:0,8:8:24.08:330,24,0	1/1:0,6:6:18.06:249,18,0	1/1:0,19:19:54.16:639,54,0	1/1:0,8:8:15.05:179,15,0	1/1:0,12:12:36.10:406,36,0	0/0:21,0:21:63.22:0,63,1020	0/0:30,1:31:51.33:0,51,1305	1/1:1,12:13:39.12:482,39,0	1/1:1,18:19:57.18:752,57,0	1/1:1,14:15:42.02:498,42,0	1/1:0,5:5:15.05:191,15,0
chr10	69016686	.	ACTCC	A	9782.39	PASS	AC=44;AF=0.786;AN=56;BaseQRankSum=17.395;DP=452;FS=49.016;HRun=0;HaplotypeScore=156.3810;InbreedingCoeff=0.9896;MQ=62.99;MQ0=0;MQRankSum=-17.308;QD=35.70;ReadPosRankSum=4.066;VQSLOD=3.0668;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,102,2955	1/1:0,7:7:21.06:257,21,0	0/0:25,0:25:72.24:0,72,2006	0/0:31,0:31:93.31:0,93,2521	0/0:33,0:33:99:0,99,2858	1/1:0,13:13:39.13:496,39,0	1/1:1,11:12:36.09:438,36,0	1/1:3,8:11:27.45:348,27,0	1/1:0,14:14:42.14:542,42,0	1/1:1,10:11:30.06:394,30,0	1/1:1,13:13:30.09:364,30,0	1/1:0,8:8:24.07:296,24,0	1/1:1,12:13:39.12:480,39,0	1/1:1,18:18:51.16:632,51,0	1/1:1,23:24:69.22:880,69,0	1/1:0,12:12:36.12:461,36,0	1/1:2,11:13:27.08:338,27,0	1/1:0,8:8:24.08:347,24,0	1/1:0,6:6:18.06:262,18,0	1/1:0,18:19:54.17:685,54,0	1/1:0,7:8:15.04:189,15,0	1/1:0,12:12:36.11:432,36,0	0/0:22,0:22:66.23:0,66,1914	0/0:31,1:32:55.28:0,55,2534	1/1:1,12:13:36.11:448,36,0	1/1:0,18:18:54.18:765,54,0	1/1:0,14:14:42.07:528,42,0	1/1:0,5:5:15.05:201,15,0
chr10	69017056	.	G	GTT	10525.81	PASS	AC=42;AF=0.750;AN=56;BaseQRankSum=-6.362;DP=709;FS=0.000;HRun=9;HaplotypeScore=96.6152;InbreedingCoeff=0.9833;MQ=60.33;MQ0=26;MQRankSum=0.605;QD=22.73;ReadPosRankSum=1.145;VQSLOD=4.1032;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:40:99:0,106,1082	1/1:3,3:7:8.52:101,9,0	0/0:47,0:16:31.71:0,32,355	0/0:65,0:31:38.10:0,38,417	0/0:26,0:26:65.34:0,65,669	1/1:5,16:21:32.65:508,33,0	1/1:4,15:20:38.62:561,39,0	1/1:4,0:24:49.79:212,50,0	1/1:5,22:28:51.17:767,51,0	1/1:4,0:32:64.29:222,64,0	1/1:2,0:18:25.43:97,25,0	1/1:2,22:24:36.09:519,36,0	1/1:3,14:17:27.09:416,27,0	1/1:1,14:15:27.09:416,27,0	1/1:6,15:22:32.60:470,33,0	1/1:1,26:30:62.18:894,62,0	1/1:6,18:29:45.12:607,45,0	0/0:20,0:19:20.82:0,21,340	1/1:9,10:19:36.08:481,36,0	1/1:5,20:25:51.06:699,51,0	1/1:7,8:10:15.05:231,15,0	1/1:2,12:12:30.10:452,30,0	0/0:20,0:20:54.10:0,54,565	0/0:23,0:26:53.77:0,54,665	1/1:4,18:23:41.61:583,42,0	1/1:7,17:25:56.64:770,57,0	1/1:1,34:36:77.95:1182,78,0	1/1:7,7:13:23.95:336,24,0
chr10	69018521	.	AAAAC	A	1909.27	PASS	AB=0.564;AC=5;AF=0.104;AN=48;BaseQRankSum=8.628;DP=511;FS=3.780;HRun=0;HaplotypeScore=94.8160;InbreedingCoeff=0.8022;MQ=58.88;MQ0=7;MQRankSum=2.743;QD=31.82;ReadPosRankSum=1.799;VQSLOD=3.7467;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	0/0:14,0:14:42.14:0,42,1019	0/0:14,0:7:21.07:0,21,506	0/0:18,0:13:35.99:0,36,693	./.	0/0:14,0:14:42.14:0,42,1016	0/0:33,0:33:75.26:0,75,1755	0/0:34,0:33:87.20:0,87,1882	0/0:18,0:18:48.16:0,48,1107	1/1:3,11:14:33.11:561,33,0	1/1:3,12:15:33.02:458,33,0	0/0:19,0:19:45.15:0,45,1074	0/0:20,0:20:45.11:0,45,956	0/0:19,0:19:45.15:0,45,1119	0/0:32,0:32:84.27:0,84,1945	0/0:18,0:18:48.08:0,48,1123	0/0:33,0:33:78.25:0,78,1766	0/1:7,24:30:9.26:1016,0,9	0/0:30,0:30:81.22:0,81,1813	0/0:20,0:20:54.19:0,54,1297	0/0:23,0:23:63.19:0,63,1431	0/0:17,0:17:48.15:0,48,1120	./.	./.	0/0:25,0:25:69.24:0,69,1699	0/0:18,0:18:51.16:0,51,1196	0/0:21,0:20:57.17:0,57,1375	0/0:11,0:11:33.11:0,33,801
chr10	69019411	.	T	TC	2224.98	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=13.350;DP=686;FS=0.000;HRun=0;HaplotypeScore=93.6946;InbreedingCoeff=0.9656;MQ=77.31;MQ0=0;MQRankSum=-3.576;QD=24.72;ReadPosRankSum=1.583;VQSLOD=4.6093;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,37:39:99:1066,105,0	0/0:11,0:11:27.09:0,27,375	0/0:14,0:14:41.97:0,42,525	0/0:23,0:22:33.36:0,33,748	1/1:2,7:10:17.97:183,18,0	0/0:13,0:13:39.13:0,39,542	0/0:42,0:42:99:0,126,1745	0/0:34,0:34:99:0,99,1370	0/0:20,0:20:60.20:0,60,837	0/0:20,0:20:57.19:0,57,796	0/0:9,0:9:24.08:0,24,334	0/0:31,0:31:90.26:0,90,1218	0/0:26,0:26:78.26:0,78,1085	0/0:34,0:34:99:0,102,1424	0/0:24,0:24:72.23:0,72,989	0/0:29,0:29:84.27:0,84,1153	0/0:41,0:41:99:0,120,1678	0/0:30,0:30:87.29:0,87,1208	0/0:20,0:20:60.19:0,60,823	0/0:4,0:4:6.02:0,6,80	0/0:76,0:76:99:0,223,3074	0/0:12,0:12:36.12:0,36,502	1/1:1,7:8:17.58:162,18,0	1/1:3,30:33:87.15:972,87,0	0/0:14,0:14:36.12:0,36,495	0/0:27,0:27:78.25:0,78,1075	0/0:26,0:26:72.22:0,72,988	0/0:16,0:16:48.16:0,48,668
chr10	69019412	.	A	ACT	3416.16	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=13.559;DP=685;FS=0.000;HRun=0;HaplotypeScore=105.7677;InbreedingCoeff=0.9682;MQ=76.63;MQ0=0;MQRankSum=-4.538;QD=37.13;ReadPosRankSum=1.228;VQSLOD=5.2606;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,33:38:99:1559,108,0	0/0:11,0:11:27.09:0,27,435	0/0:14,0:14:41.49:0,41,604	0/0:20,0:20:50.13:0,50,830	1/1:2,8:10:20.92:284,21,0	0/0:13,0:13:39.13:0,39,627	0/0:42,0:42:99:0,126,2049	0/0:36,0:36:99:0,102,1617	0/0:20,0:20:60.20:0,60,979	0/0:20,0:20:57.19:0,57,927	0/0:9,0:9:24.08:0,24,382	0/0:31,0:31:93.30:0,93,1465	0/0:26,0:26:78.27:0,78,1267	0/0:34,0:34:99:0,102,1657	0/0:24,0:24:72.25:0,72,1168	0/0:28,0:28:84.27:0,84,1345	0/0:41,0:41:99:0,120,1958	0/0:30,0:30:87.30:0,87,1399	0/0:20,0:20:60.20:0,60,951	0/0:3,0:3:6.02:0,6,90	0/0:74,0:74:99:0,223,3572	0/0:12,0:12:36.12:0,36,587	1/1:3,7:10:21.03:262,21,0	1/1:4,30:34:87.29:1310,87,0	0/0:14,0:14:36.12:0,36,585	0/0:28,0:28:81.27:0,81,1289	0/0:26,0:26:75.24:0,75,1193	0/0:16,0:16:48.16:0,48,783
chr10	69019942	.	G	GT	2794.75	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=14.611;DP=690;FS=1.392;HRun=7;HaplotypeScore=94.4741;InbreedingCoeff=0.9998;MQ=87.31;MQ0=0;MQRankSum=-1.126;QD=27.40;ReadPosRankSum=0.969;VQSLOD=3.9150;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,31:34:84.26:1015,84,0	0/0:17,0:17:48.08:0,48,464	0/0:29,0:29:57.06:0,57,582	0/0:23,0:23:29.44:0,29,422	1/1:3,20:23:54.12:636,54,0	0/0:28,0:28:81.07:0,81,767	0/0:12,0:12:36.06:0,36,348	0/0:36,0:36:87.12:0,87,834	0/0:22,0:22:54.04:0,54,509	0/0:25,0:25:72.11:0,72,695	0/0:23,0:23:63.02:0,63,591	0/0:21,0:21:57.09:0,57,550	0/0:24,0:24:63.06:0,63,600	0/0:26,0:26:69.10:0,69,666	0/0:23,0:23:60.04:0,60,563	0/0:39,0:39:99:0,108,1020	0/0:18,0:18:49.47:0,49,490	0/0:17,0:17:51.08:0,51,492	0/0:21,0:21:51.05:0,51,480	0/0:38,0:38:99:0,99,944	0/0:20,0:20:54.07:0,54,515	0/0:28,0:28:78.10:0,78,747	1/1:5,25:31:69.21:834,69,0	1/1:1,13:14:39.12:471,39,0	0/0:23,0:23:63.07:0,63,596	0/0:30,1:31:56.89:0,57,826	0/0:29,0:29:81.12:0,81,782	0/0:15,0:15:45.07:0,45,435
chr10	69021441	.	G	GT	4514.24	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-12.974;DP=741;FS=8.773;HRun=1;HaplotypeScore=71.7841;InbreedingCoeff=0.9977;MQ=93.21;MQ0=0;MQRankSum=-5.926;QD=39.60;ReadPosRankSum=2.266;VQSLOD=5.3295;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,47:47:99:1798,120,0	0/0:13,0:13:39.13:0,39,506	0/0:40,0:40:99:0,105,1309	0/0:26,0:26:60.19:0,60,760	1/1:1,27:28:81.23:1188,81,0	0/0:18,0:18:51.17:0,51,662	0/0:21,0:21:63.18:0,63,802	0/0:34,0:33:96.31:0,96,1245	0/0:27,0:27:78.25:0,78,1012	0/0:23,0:22:59.98:0,60,747	0/0:16,0:16:48.14:0,48,607	0/0:32,0:32:93.29:0,93,1192	0/0:22,0:22:66.20:0,66,842	0/0:21,0:21:60.19:0,60,779	0/0:28,0:28:81.26:0,81,1051	0/0:32,0:32:93.29:0,93,1193	0/0:38,0:38:99:0,114,1464	0/0:33,0:33:90.29:0,90,1166	0/0:28,0:28:81.25:0,81,1039	0/0:31,0:31:93.29:0,93,1193	0/0:35,0:35:95.78:0,96,1200	0/0:26,0:26:69.22:0,69,893	1/1:0,17:17:45.15:674,45,0	1/1:0,22:22:57.19:854,57,0	0/0:12,0:12:36.02:0,36,432	0/0:39,0:39:99:0,108,1384	0/0:26,0:26:78.24:0,78,997	0/0:6,0:6:18.06:0,18,234
chr10	69022146	.	G	GCC	545.10	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-0.446;DP=516;FS=0.000;HRun=10;HaplotypeScore=86.2461;InbreedingCoeff=0.9140;MQ=89.20;MQ0=0;MQRankSum=-1.761;QD=14.73;ReadPosRankSum=-3.760;VQSLOD=1.3636;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:24:28.17:0,28,124	0/0:12,0:12:20.99:0,21,214	0/0:27,0:27:29.48:0,29,269	0/0:19,0:19:4.03:0,4,227	0/0:23,0:23:38:0,38,199	0/0:22,0:22:57.11:0,57,579	0/0:15,0:15:33.06:0,33,335	0/0:20,0:20:17.97:0,18,183	0/0:19,0:19:45.04:0,45,458	1/1:10,3:13:24.07:305,24,0	1/1:5,5:11:8.52:98,9,0	0/0:19,0:19:45.05:0,45,457	0/0:10,0:11:32.81:0,33,313	0/0:20,0:20:51.08:0,51,515	0/0:18,0:18:48.09:0,48,488	0/0:19,0:19:48.08:0,48,488	0/0:24,0:25:65.86:0,66,650	1/1:4,8:13:20.56:277,21,0	0/0:19,0:19:33.04:0,33,333	0/0:12,0:12:30.02:0,30,305	0/0:16,0:16:36.03:0,36,358	0/0:18,0:18:45.08:0,45,450	0/0:21,0:21:16.82:0,17,127	0/0:19,0:19:29.68:0,30,135	0/0:21,0:21:50.83:0,51,500	0/0:23,0:23:60.12:0,60,605	0/0:17,0:17:47.80:0,48,456	0/0:19,0:19:23.88:0,24,350
chr10	69022156	.	C	CT	2104.70	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=2.718;DP=518;FS=2.926;HRun=4;HaplotypeScore=73.4585;InbreedingCoeff=0.9745;MQ=85.97;MQ0=0;MQRankSum=-3.322;QD=23.65;ReadPosRankSum=1.635;VQSLOD=2.6668;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,26:29:42.13:531,42,0	0/0:10,0:10:21.06:0,21,236	0/0:22,0:24:31.29:0,31,337	0/0:20,0:21:15.76:0,16,263	1/1:3,20:22:57:660,57,0	0/0:23,0:23:66.09:0,66,690	0/0:12,0:12:30.07:0,30,328	0/0:10,0:10:18.03:0,18,193	0/0:17,0:17:45.10:0,45,486	0/0:16,0:16:26.46:0,26,207	0/0:10,0:10:9.16:0,9,87	0/0:18,0:18:45.11:0,45,492	0/0:15,0:15:38.95:0,39,379	0/0:19,0:19:45.08:0,45,479	0/0:20,0:20:60.09:0,60,627	0/0:17,0:17:45.12:0,45,498	0/0:27,0:27:75.05:0,75,779	0/0:10,0:10:18.71:0,19,123	0/0:18,0:18:51.06:0,51,513	0/0:20,0:20:48.03:0,48,475	0/0:16,0:16:33.04:0,33,343	0/0:21,0:21:45.07:0,45,465	1/1:0,22:23:48.62:623,49,0	1/1:4,10:14:35.52:451,36,0	0/0:25,0:25:72.01:0,72,715	0/0:25,0:25:72.11:0,72,750	0/0:20,0:19:50.97:0,51,500	0/0:15,0:15:27.05:0,27,292
chr10	69022669	.	A	AGTGT	1087.62	PASS	AB=1.000;AC=11;AF=0.220;AN=50;BaseQRankSum=-0.953;DP=641;FS=4.893;HRun=0;HaplotypeScore=128.0097;InbreedingCoeff=0.6976;MQ=64.20;MQ0=14;MQRankSum=-1.316;QD=7.16;ReadPosRankSum=-3.179;VQSLOD=1.5499;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:19,1:32:17.80:327,18,0	0/0:8,0:8:9.02:0,9,138	./.	./.	1/1:8,9:20:5.75:82,6,0	0/0:21,0:23:20.91:0,21,284	0/0:31,0:36:26.71:0,27,350	1/1:30,0:29:19.47:208,19,0	0/0:15,0:20:21.04:0,21,270	0/0:19,0:21:24.13:0,24,199	./.	0/0:22,0:23:14.60:0,15,352	0/0:26,0:25:26.98:0,27,379	0/0:19,0:19:6.02:0,6,93	0/0:20,0:25:17.60:0,18,368	0/0:30,0:32:2.86:0,3,561	0/0:18,0:19:9.02:0,9,140	0/0:3,0:15:27.03:0,27,251	0/0:21,0:21:0.05:0,0,42	0/0:17,0:17:29.08:0,29,320	0/0:36,0:34:6.21:0,6,66	0/0:26,0:26:14.99:0,15,202	1/1:6,1:19:17.34:258,17,0	1/1:8,13:24:20.54:360,21,0	0/0:17,0:18:18.03:0,18,238	0/1:26,0:25:13.05:13,0,60	0/0:23,0:26:30.07:0,30,405	0/0:14,0:15:24.07:0,24,348
chr10	69023092	.	A	AGT	4221.13	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=9.399;DP=536;FS=8.981;HRun=0;HaplotypeScore=73.1183;InbreedingCoeff=0.9968;MQ=93.49;MQ0=0;MQRankSum=-1.893;QD=50.86;ReadPosRankSum=3.113;VQSLOD=5.5912;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,36:36:99:1965,99,0	0/0:6,0:6:18.06:0,18,294	0/0:23,0:23:65.42:0,65,985	0/0:25,0:25:70.71:0,71,1001	1/1:0,13:14:33.04:602,33,0	0/0:20,0:20:60.20:0,60,964	0/0:14,0:14:39.12:0,39,613	0/0:20,0:20:57.15:0,57,928	0/0:18,0:18:54.18:0,54,860	0/0:24,0:24:66.22:0,66,1049	0/0:13,0:13:39.10:0,39,581	0/0:20,0:20:60.19:0,60,953	0/0:11,0:11:33.11:0,33,538	0/0:11,0:11:30.10:0,30,489	0/0:18,0:18:54.18:0,54,854	0/0:13,0:13:39.13:0,39,636	0/0:41,0:41:99:0,123,1916	0/0:23,0:23:69.24:0,69,1125	0/0:24,0:24:72.21:0,72,1083	0/0:15,0:15:45.10:0,45,681	0/0:23,0:23:69.24:0,69,1120	0/0:18,0:18:54.18:0,54,881	1/1:1,12:14:34.25:618,34,0	1/1:0,18:19:51.18:1036,51,0	0/0:18,0:18:54.18:0,54,881	0/0:26,0:26:78.27:0,78,1272	0/0:21,0:21:63.21:0,63,1019	0/0:8,0:8:24.01:0,24,311
chr10	69023479	.	AATAT	A	827.53	PASS	AB=0.870;AC=13;AF=0.283;AN=46;BaseQRankSum=6.113;DP=200;FS=4.030;HRun=0;HaplotypeScore=47.1271;InbreedingCoeff=0.2491;MQ=69.35;MQ0=1;MQRankSum=-2.673;QD=8.11;ReadPosRankSum=-0.284;VQSLOD=1.5595;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:2,0:2:2.98:0,3,22	0/0:1,0:1:3.01:0,3,73	1/1:5,0:4:1.25:3,1,0	0/0:5,0:3:0.47:0,0,1	./.	0/0:6,0:7:11.72:0,12,177	0/0:4,0:4:3.01:0,3,67	1/1:27,0:26:39.04:363,39,0	0/0:6,0:6:6.02:0,6,146	1/1:6,0:6:3.11:8,3,0	0/1:5,0:5:2.16:13,0,2	0/0:2,0:2:3.01:0,3,73	0/0:8,0:8:12.04:0,12,290	0/0:9,0:9:21.07:0,21,472	0/0:6,0:6:3.01:0,3,73	0/1:3,0:4:18.60:19,0,137	0/1:12,1:14:16.38:16,0,617	1/1:7,17:25:33.10:518,33,0	0/0:12,0:12:9.03:0,9,159	./.	0/0:2,0:3:5.75:0,6,75	./.	./.	./.	0/0:12,0:12:17.85:0,18,415	0/1:4,0:5:4.10:4,0,142	0/0:6,0:8:11.78:0,12,225	0/1:7,1:11:16.64:17,0,556
chr10	69023480	.	ATATATAT	A	1370.98	PASS	AB=0.917;AC=5;AF=0.089;AN=56;BaseQRankSum=4.909;DP=198;FS=0.788;HRun=0;HaplotypeScore=56.4004;InbreedingCoeff=0.2222;MQ=69.34;MQ0=1;MQRankSum=-2.978;QD=33.44;ReadPosRankSum=-2.655;VQSLOD=2.6955;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:2,0:2:3.01:0,3,63	0/0:1,0:1:3.01:0,3,123	0/0:5,0:4:0.32:0,0,78	0/0:5,0:3:5.99:0,6,52	0/1:4,0:4:0:0,0,1	0/0:7,0:7:18.05:0,18,437	0/0:3,0:3:9.02:0,9,177	1/1:1,25:26:76.45:1430,76,0	0/0:6,0:6:18.04:0,18,375	0/1:4,0:6:20.88:21,0,67	0/0:1,0:4:9.03:0,9,143	0/0:2,0:2:6.02:0,6,153	0/0:8,0:8:24.05:0,24,593	0/0:10,0:10:30.09:0,30,990	0/0:6,0:6:18.04:0,18,289	0/1:4,0:4:32.04:32,0,264	0/0:14,0:14:42.11:0,42,1332	0/0:24,0:24:34.35:0,34,411	0/0:11,0:11:23.76:0,24,349	0/0:5,0:5:8.47:0,8,90	0/0:3,0:3:9.03:0,9,206	0/0:2,0:2:6.01:0,6,61	0/0:1,0:1:2.96:0,3,19	0/0:1,0:1:2.96:0,3,19	0/0:13,0:13:32.89:0,33,878	0/0:4,0:5:14.41:0,14,340	0/0:8,0:8:20.94:0,21,550	0/0:11,0:11:33.09:0,33,1108
chr10	69026066	.	G	GA	4282.76	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=8.477;DP=747;FS=3.417;HRun=2;HaplotypeScore=83.2902;InbreedingCoeff=0.9988;MQ=87.00;MQ0=0;MQRankSum=-3.383;QD=35.99;ReadPosRankSum=1.851;VQSLOD=5.4937;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,38:38:93.31:1331,93,0	0/0:7,0:7:21.05:0,21,246	0/0:27,0:27:72.07:0,72,829	0/0:23,0:23:42.87:0,43,657	1/1:0,31:31:93.14:1238,93,0	0/0:18,0:18:54.17:0,54,668	0/0:29,0:29:78.20:0,78,919	0/0:32,0:31:81.08:0,81,918	0/0:25,0:25:72.22:0,72,879	0/0:31,0:31:90.28:0,90,1101	0/0:23,0:23:69.22:0,69,852	0/0:28,0:28:81.25:0,81,990	0/0:27,0:27:81.24:0,81,987	0/0:21,0:21:60.16:0,60,715	0/0:29,0:29:84.24:0,84,1025	0/0:29,0:29:87.27:0,87,1076	0/0:43,0:43:99:0,111,1295	0/0:29,0:29:74.71:0,75,937	0/0:28,0:28:78.22:0,78,941	0/0:26,0:26:78.19:0,78,924	0/0:41,0:41:99:0,114,1409	0/0:25,0:25:63.20:0,63,778	1/1:1,21:22:51.17:728,51,0	1/1:2,26:28:69.23:986,69,0	0/0:19,0:19:57.18:0,57,704	0/0:29,0:29:84.26:0,84,1029	0/0:25,0:25:75.23:0,75,923	0/0:14,0:14:42.09:0,42,488
chr10	69026696	.	GT	G	2698.27	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=10.824;DP=491;FS=11.136;HRun=10;HaplotypeScore=59.5530;InbreedingCoeff=0.8346;MQ=69.49;MQ0=0;MQRankSum=2.463;QD=18.36;ReadPosRankSum=1.959;VQSLOD=3.7621;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,23:24:50.99:443,51,0	0/0:9,0:9:17.98:0,18,184	0/1:11,0:10:14.42:14,0,27	0/0:7,0:6:11.52:0,12,109	1/1:2,23:25:65.91:560,66,0	0/0:23,0:23:60.16:0,60,664	0/0:19,1:20:45.12:0,45,496	0/0:10,0:43:97.60:0,98,553	0/0:15,0:15:33.35:0,33,385	1/1:0,18:18:53.99:469,54,0	1/1:0,20:20:59.94:514,60,0	0/0:18,0:18:39.11:0,39,431	0/0:12,0:12:33.03:0,33,342	0/0:7,0:7:15.04:0,15,166	0/0:10,1:11:1.04:0,1,239	0/0:16,0:16:27.07:0,27,299	0/0:25,0:24:63.12:0,63,675	1/1:3,24:27:28.47:463,28,0	0/0:21,0:21:57.15:0,57,624	0/0:23,0:23:66.17:0,66,723	0/0:9,0:9:21.06:0,21,232	0/0:4,0:4:3.01:0,3,33	1/1:1,11:12:26.28:233,26,0	1/1:2,8:10:23.90:199,24,0	0/0:22,1:22:31.62:0,32,566	0/0:18,1:19:19.07:0,19,438	0/0:21,0:21:51.14:0,51,564	0/0:18,0:17:48.13:0,48,531
chr10	69027119	.	T	TG	493.81	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-4.825;DP=627;FS=4.714;HRun=6;HaplotypeScore=63.4350;InbreedingCoeff=0.9829;MQ=80.18;MQ0=0;MQRankSum=-0.446;QD=18.29;ReadPosRankSum=-3.902;VQSLOD=2.6656;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,102,1040	0/0:9,0:9:21.05:0,21,214	0/0:25,0:25:42.10:0,42,489	0/0:12,0:12:29.87:0,30,264	0/0:25,0:25:60.13:0,60,611	0/0:23,0:23:66.13:0,66,666	0/0:25,0:25:69.14:0,69,696	1/1:8,19:27:48.07:589,48,0	0/0:26,0:26:72.13:0,72,721	0/0:20,0:20:60.14:0,60,611	0/0:6,0:6:18.04:0,18,184	0/0:21,0:21:60.13:0,60,612	0/0:22,0:22:54.08:0,54,551	0/0:26,0:26:72.15:0,72,734	0/0:26,0:26:69.13:0,69,697	0/0:27,0:27:69.13:0,69,696	0/0:28,0:28:69.13:0,69,696	0/0:23,0:23:51.06:0,51,510	0/0:22,0:22:51.11:0,51,520	0/0:17,0:17:48.10:0,48,488	0/0:32,0:32:81.11:0,81,797	0/0:12,0:12:36.08:0,36,367	0/0:16,0:16:30.06:0,30,305	0/0:31,0:31:84.18:0,84,857	0/0:33,0:33:78.16:0,78,789	0/0:23,0:24:65.17:0,65,644	0/0:24,0:24:69.14:0,69,694	0/0:8,0:8:21.05:0,21,214
chr10	69027575	.	TC	T	1107.25	PASS	AB=0.971;AC=5;AF=0.089;AN=56;BaseQRankSum=5.834;DP=633;FS=0.613;HRun=1;HaplotypeScore=67.0161;InbreedingCoeff=0.7767;MQ=67.58;MQ0=6;MQRankSum=-0.898;QD=15.82;ReadPosRankSum=-1.093;VQSLOD=3.1547;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,144,1886	0/0:6,0:6:18.06:0,18,249	0/0:14,0:12:33.67:0,34,364	0/0:14,0:11:23.13:0,23,321	0/0:16,0:16:45.11:0,45,582	0/0:24,0:24:72.22:0,72,985	0/0:31,0:30:85.65:0,86,1125	0/0:37,0:37:99:0,102,1289	0/0:26,0:26:75.19:0,75,966	1/1:0,21:21:60.10:712,60,0	1/1:0,15:15:39.04:494,39,0	0/0:24,0:24:68.65:0,69,910	0/0:23,0:23:66.19:0,66,882	0/0:20,0:19:57.19:0,57,782	0/0:20,0:20:60.19:0,60,820	0/0:29,0:29:87.22:0,87,1127	0/0:32,0:32:96.16:0,96,1207	0/1:33,1:34:30.97:31,0,88	0/0:23,0:22:65.68:0,66,798	0/0:23,0:23:69.22:0,69,942	0/0:18,0:17:51.06:0,51,635	0/0:25,0:24:69.20:0,69,919	0/0:11,0:11:33.02:0,33,370	0/0:20,0:20:60.12:0,60,778	0/0:21,0:21:63.20:0,63,857	0/0:21,0:21:60.19:0,60,832	0/0:22,0:21:66.17:0,66,866	0/0:15,0:15:45.05:0,45,550
chr10	69029073	.	TA	T	1400.38	PASS	AB=0.788;AC=14;AF=0.250;AN=56;BaseQRankSum=10.806;DP=627;FS=0.000;HRun=13;HaplotypeScore=96.6463;InbreedingCoeff=0.7251;MQ=69.72;MQ0=2;MQRankSum=0.046;QD=8.24;ReadPosRankSum=0.647;VQSLOD=2.8715;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,28:41:45.83:632,46,0	0/0:11,1:16:13.91:0,14,266	0/0:28,0:17:19.49:0,19,221	0/0:26,1:15:5.75:0,6,97	1/1:5,18:23:21.49:321,21,0	0/0:21,2:24:20.34:0,20,490	0/0:23,1:24:20.16:0,20,347	1/1:8,0:30:41.14:134,41,0	0/0:18,0:20:50.92:0,51,480	0/0:26,0:32:16.90:0,17,192	0/1:5,0:12:11.22:11,0,29	0/0:20,1:21:32.17:0,32,464	0/0:17,1:18:13.86:0,14,267	0/1:16,1:17:10.01:10,0,214	0/0:24,0:24:31.25:0,31,421	0/0:22,0:23:53.88:0,54,493	0/0:28,2:31:11.22:0,11,531	1/1:4,0:11:2.27:24,2,0	0/0:19,0:26:60:0,60,495	0/0:19,2:21:7.24:0,7,382	0/0:13,0:13:30.04:0,30,286	0/0:22,2:24:18.80:0,19,316	1/1:3,10:14:25.10:166,25,0	1/1:5,17:22:23.02:285,23,0	0/0:19,1:20:26.09:0,26,387	0/0:15,1:16:23.13:0,23,370	0/0:22,0:24:28.17:0,28,454	0/0:23,2:25:10.17:0,10,388
chr10	69029081	.	A	AAAACC	2517.55	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=4.711;DP=643;FS=1.032;HRun=0;HaplotypeScore=146.1477;InbreedingCoeff=0.7982;MQ=66.40;MQ0=5;MQRankSum=-7.559;QD=28.29;ReadPosRankSum=1.571;VQSLOD=3.7005;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,103,1331	0/0:17,0:17:44.33:0,44,631	0/0:29,0:17:22.19:0,22,471	0/0:30,0:18:36.61:0,37,436	0/0:26,0:26:45.07:0,45,722	0/0:28,0:28:84.20:0,84,1392	0/0:21,0:21:53.51:0,54,822	0/1:33,0:33:58.89:59,0,650	0/0:23,0:23:66.21:0,66,1138	1/1:6,22:29:77.68:1793,78,0	1/1:7,2:18:34.63:565,35,0	0/0:22,0:22:63.20:0,63,1049	0/0:17,0:17:42.12:0,42,672	0/0:13,0:13:39.13:0,39,660	0/0:21,0:21:60.20:0,60,1053	0/0:23,0:23:66.21:0,66,1080	0/0:32,0:32:90.24:0,90,1497	1/1:7,0:9:22.44:249,22,0	0/0:30,0:29:77.74:0,78,1151	0/0:23,0:23:62.01:0,62,1002	0/0:12,0:12:30.10:0,30,527	0/0:22,0:22:57.14:0,57,846	0/0:15,0:15:7.07:0,7,431	0/0:19,0:19:44.15:0,44,582	0/0:21,0:21:56.59:0,57,904	0/0:21,0:20:9.65:0,10,793	0/0:24,0:24:71.69:0,72,1160	0/0:25,0:25:57.17:0,57,895
chr10	69032152	.	CTGTG	C	1376.20	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=1.627;DP=675;FS=1.373;HRun=0;HaplotypeScore=137.8983;InbreedingCoeff=0.9868;MQ=69.92;MQ0=11;MQRankSum=0.709;QD=17.20;ReadPosRankSum=3.005;VQSLOD=3.5904;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:12,14:26:30.04:460,30,0	0/0:12,0:12:21.06:0,21,419	0/0:43,0:23:14.98:0,15,292	0/0:35,0:23:30.19:0,30,497	1/1:8,7:15:27.55:404,28,0	0/0:17,0:17:36.12:0,36,797	0/0:21,0:23:56.65:0,57,1122	0/0:22,0:22:23.76:0,24,326	0/0:27,0:27:57.18:0,57,1305	0/0:23,0:23:42.60:0,43,687	0/0:22,0:24:36.09:0,36,483	0/0:28,0:28:59.98:0,60,1321	0/0:15,0:16:39.10:0,39,785	0/0:16,0:17:44.86:0,45,919	0/0:22,0:24:56.65:0,57,1173	0/0:27,0:29:60.04:0,60,1184	0/0:35,0:35:87.27:0,87,2005	0/0:13,0:15:26.44:0,26,306	0/0:17,0:16:24.08:0,24,557	0/0:24,0:24:42.11:0,42,873	0/0:47,0:49:84.01:0,84,1888	0/0:26,0:28:65.70:0,66,1439	1/1:12,8:20:27.04:355,27,0	1/1:11,7:18:20.65:317,21,0	0/0:19,0:22:38.30:0,38,711	0/0:29,0:30:40.96:0,41,1294	0/0:23,0:24:56.93:0,57,1261	0/0:8,0:8:15.52:0,16,368
chr10	69032183	.	AGT	A	1070.51	PASS	AB=0.740;AC=6;AF=0.107;AN=56;BaseQRankSum=9.062;DP=686;FS=1.177;HRun=0;HaplotypeScore=130.5650;InbreedingCoeff=0.5931;MQ=56.21;MQ0=18;MQRankSum=-6.192;QD=10.71;ReadPosRankSum=-4.583;VQSLOD=2.4840;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:22.24:0,22,211	0/0:8,0:8:24.07:0,24,393	0/0:47,0:14:38.26:0,38,492	0/0:54,0:25:41.90:0,42,620	0/0:22,0:21:12.52:0,13,121	0/0:15,0:15:45.10:0,45,713	0/0:30,0:30:82.98:0,83,1401	1/1:21,20:37:49.59:513,50,0	0/0:27,0:27:67.95:0,68,1088	0/1:13,6:18:71.84:191,0,72	1/1:8,14:22:11.24:283,11,0	0/0:24,0:24:41.27:0,41,1025	0/0:18,0:18:54.16:0,54,891	0/0:18,0:18:50.93:0,51,814	0/0:24,0:24:71.92:0,72,1084	0/0:20,0:20:13.99:0,14,830	0/0:30,0:30:81.23:0,81,1484	0/1:11,7:15:13.60:216,0,14	0/0:13,0:13:39.12:0,39,669	0/0:16,0:16:44.96:0,45,707	0/0:48,0:48:99:0,107,2044	0/0:23,0:23:62.36:0,62,998	0/0:17,0:17:11.12:0,11,91	0/0:24,0:24:14.76:0,15,122	0/0:19,0:19:44.67:0,45,630	0/0:25,0:25:60.14:0,60,1113	0/0:24,0:24:72.08:0,72,1174	0/0:8,0:8:24.08:0,24,407
chr10	69032197	.	CGAGAGCGAGAGCGAGA	C	180.49	PASS	AB=0.842;AC=9;AF=0.161;AN=56;BaseQRankSum=6.294;DP=648;FS=1.043;HRun=0;HaplotypeScore=272.2112;InbreedingCoeff=0.5901;MQ=55.39;MQ0=17;MQRankSum=-1.330;QD=1.48;ReadPosRankSum=-4.852;VQSLOD=1.7705;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,17:30:9.02:103,9,0	0/0:9,0:9:25.55:0,26,1180	0/0:33,0:10:15.99:0,16,216	0/0:41,0:20:21.10:0,21,226	1/1:4,15:20:4.52:29,5,0	0/0:14,0:14:39.09:0,39,1572	0/0:32,0:32:81.22:0,81,3337	0/0:44,0:38:99:0,100,1746	0/0:22,0:22:54.18:0,54,3014	0/1:19,0:18:99:105,0,383	0/0:23,0:23:12.51:0,13,162	0/0:28,0:28:74.82:0,75,2726	0/0:21,0:21:63.14:0,63,2618	0/0:19,0:19:54.13:0,54,2413	0/0:23,0:23:63.18:0,63,2809	0/0:24,0:24:63.03:0,63,2303	0/0:29,0:29:81.18:0,81,2771	0/1:16,0:14:28.84:29,0,331	0/0:13,0:12:33.06:0,33,1227	0/0:13,0:13:32.79:0,33,1089	0/0:46,0:46:99:0,125,6337	0/0:18,0:18:42.09:0,42,1652	1/1:8,8:16:6.86:49,7,0	0/1:2,19:21:0:0,0,0	0/0:16,0:16:41.48:0,41,1725	0/0:26,0:25:74.93:0,75,2870	0/0:23,0:23:66.21:0,66,3023	0/0:9,0:9:27.09:0,27,1309
chr10	69032209	.	CGA	C	644.85	PASS	AB=0.876;AC=19;AF=0.365;AN=52;BaseQRankSum=6.986;DP=615;FS=8.477;HRun=0;HaplotypeScore=119.2437;InbreedingCoeff=-0.1788;MQ=54.75;MQ0=17;MQRankSum=0.032;QD=1.81;ReadPosRankSum=2.536;VQSLOD=1.8061;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:25:2.04:6,2,0	0/0:7,0:7:12.04:0,12,185	0/0:21,0:7:1.02:0,1,3	0/0:27,0:9:5.82:0,6,33	0/1:18,0:18:0.13:1,0,0	0/1:8,5:13:99:147,0,115	0/0:27,5:32:7.22:0,7,446	0/0:41,1:37:24.04:0,24,260	0/1:20,3:23:17.22:17,0,619	0/1:8,0:16:0.89:73,0,1	./.	0/1:23,6:29:99:162,0,443	0/0:21,1:22:11.43:0,11,565	0/1:17,1:18:4.11:4,0,363	0/0:21,1:22:1.87:0,2,412	0/1:20,3:23:72.93:73,0,377	0/0:27,4:31:4.92:0,5,491	1/1:8,0:14:10.61:49,11,0	0/1:10,1:11:30.41:30,0,103	0/1:15,1:16:15.28:15,0,297	0/1:43,5:50:77.44:77,0,966	0/0:15,0:16:6.93:0,7,242	0/1:15,0:14:0:1,0,0	./.	0/1:17,0:18:1.50:2,0,346	0/1:23,4:26:40.28:40,0,377	0/1:22,2:24:62.76:63,0,487	0/1:8,3:11:22.16:22,0,127
chr10	69032891	.	TG	T	3960.48	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=10.131;DP=567;FS=2.650;HRun=8;HaplotypeScore=63.7719;InbreedingCoeff=0.9987;MQ=84.01;MQ0=0;MQRankSum=-3.131;QD=23.16;ReadPosRankSum=0.789;VQSLOD=4.2695;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,27:30:81.13:782,81,0	0/0:9,0:9:24.07:0,24,288	0/0:23,0:23:34.40:0,34,610	0/0:22,0:22:53.19:0,53,509	1/1:6,16:22:51.08:491,51,0	0/0:21,0:21:57.17:0,57,688	0/0:22,0:22:63.19:0,63,751	1/1:7,20:27:54.05:515,54,0	0/0:15,0:15:42.13:0,42,507	1/1:4,20:24:63.05:594,63,0	1/1:4,12:16:36.05:348,36,0	0/0:25,0:26:69.08:0,69,810	0/0:15,0:15:42.13:0,42,507	0/0:15,0:16:44.98:0,45,493	0/0:24,0:24:72.21:0,72,859	0/0:18,0:19:54.02:0,54,620	0/0:28,0:28:75.20:0,75,892	1/1:2,14:17:44.10:411,44,0	0/0:24,0:24:54.14:0,54,638	0/0:16,0:16:36.11:0,36,433	0/0:16,0:16:48.15:0,48,580	0/0:16,0:16:36.10:0,36,423	1/1:2,16:18:48.07:461,48,0	1/1:2,15:17:38.65:358,39,0	0/0:15,0:15:39.08:0,39,437	0/0:22,1:23:28.19:0,28,619	0/0:35,0:35:99:0,99,1166	0/0:11,0:11:21.03:0,21,238
chr10	69034668	.	TA	T	2674.19	PASS	AB=0.911;AC=12;AF=0.214;AN=56;BaseQRankSum=6.727;DP=350;FS=1.630;HRun=1;HaplotypeScore=43.2997;InbreedingCoeff=0.6057;MQ=64.21;MQ0=3;MQRankSum=2.632;QD=21.22;ReadPosRankSum=-0.713;VQSLOD=3.4578;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:20.45:0,20,115	0/0:3,0:3:9.03:0,9,126	0/1:5,2:3:10.09:10,0,36	0/1:11,2:6:1.54:2,0,144	0/1:17,0:17:7.89:8,0,47	0/0:12,0:12:30.05:0,30,382	0/0:10,0:10:27:0,27,301	1/1:1,38:38:99:1408,114,0	0/0:4,0:4:12.02:0,12,149	1/1:2,12:14:35.38:378,35,0	1/1:0,12:12:33.11:446,33,0	0/0:12,0:12:36.11:0,36,483	0/0:8,0:8:24.05:0,24,298	0/0:8,0:8:21.04:0,21,257	0/0:10,0:10:29.99:0,30,343	0/0:6,0:6:18.06:0,18,251	0/0:19,0:18:53.85:0,54,610	1/1:0,20:20:42.14:580,42,0	0/0:17,0:17:48.08:0,48,573	0/0:6,0:6:18.03:0,18,215	0/0:7,0:7:21:0,21,221	0/0:6,0:6:15.49:0,15,170	0/0:5,0:5:5.94:0,6,18	0/1:4,0:4:10.70:11,0,11	0/0:13,0:13:21.45:0,21,468	0/0:24,0:23:69.11:0,69,814	0/0:22,0:22:66.18:0,66,862	0/0:10,0:10:30.10:0,30,417
chr10	69035855	.	C	CACTT	1607.14	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-5.807;DP=681;FS=2.741;HRun=0;HaplotypeScore=106.9170;InbreedingCoeff=0.9837;MQ=82.45;MQ0=0;MQRankSum=-6.432;QD=51.84;ReadPosRankSum=-4.421;VQSLOD=3.5154;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,141,2584	0/0:6,0:6:18.04:0,18,304	0/0:24,0:24:63.17:0,63,1027	0/0:21,0:20:43.72:0,44,830	0/0:24,0:24:69.22:0,69,1255	0/0:24,0:24:69.21:0,69,1224	0/0:33,0:33:87.27:0,87,1551	1/1:11,20:31:72.16:1702,72,0	0/0:21,0:21:60.21:0,60,1119	0/0:26,0:26:78.25:0,78,1354	0/0:14,0:14:36.12:0,36,672	0/0:23,0:23:66.20:0,66,1164	0/0:11,0:11:33.08:0,33,553	0/0:23,0:23:69.20:0,69,1197	0/0:27,0:27:81.25:0,81,1423	0/0:24,0:24:66.20:0,66,1188	0/0:36,0:36:99:0,102,1760	0/0:28,0:27:81.23:0,81,1403	0/0:24,0:24:72.19:0,72,1185	0/0:17,0:17:48.15:0,48,860	0/0:53,0:53:99:0,156,2797	0/0:16,0:16:48.16:0,48,896	0/0:13,0:13:39.13:0,39,699	0/0:35,0:35:93.27:0,93,1633	0/0:19,0:19:51.17:0,51,952	0/0:26,0:26:72.23:0,72,1308	0/0:23,0:23:66.21:0,66,1199	0/0:7,0:7:18.03:0,18,245
chr10	69036484	.	G	GAC	2277.55	PASS	AB=0.910;AC=12;AF=0.214;AN=56;BaseQRankSum=-5.483;DP=611;FS=1.740;HRun=0;HaplotypeScore=90.9142;InbreedingCoeff=0.5415;MQ=62.88;MQ0=28;MQRankSum=1.864;QD=9.90;ReadPosRankSum=3.387;VQSLOD=3.3349;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,20:28:3.16:540,3,0	0/0:8,0:8:21.06:0,21,251	0/0:43,0:19:17.82:0,18,180	0/1:60,0:23:8.60:9,0,270	1/1:4,19:22:33.11:528,33,0	0/0:33,0:35:75.23:0,75,940	0/0:15,0:16:32.92:0,33,362	0/0:44,0:43:60.29:0,60,557	0/0:20,0:21:62.20:0,62,679	0/0:17,0:15:30.04:0,30,332	0/1:27,0:27:26.67:27,0,383	0/0:9,0:8:18.06:0,18,216	0/0:8,0:9:23.89:0,24,254	0/0:10,0:12:26.73:0,27,268	0/0:15,0:15:42.10:0,42,480	0/0:18,0:18:48.15:0,48,575	0/0:19,0:20:32.57:0,33,523	1/1:9,2:25:23.01:261,23,0	0/0:15,0:15:32.93:0,33,374	0/0:15,0:15:42.12:0,42,492	0/0:27,0:26:57.13:0,57,657	0/0:11,0:12:25.62:0,26,363	0/1:7,9:15:74.77:339,0,75	1/1:13,21:34:15.21:732,15,0	0/0:14,0:14:23.61:0,24,288	0/1:14,0:13:8.29:8,0,393	0/0:23,0:22:54.16:0,54,647	0/0:8,0:8:18.02:0,18,190
chr10	69039451	.	C	CT	5797.95	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-8.931;DP=526;FS=1.138;HRun=7;HaplotypeScore=68.5159;InbreedingCoeff=0.9989;MQ=76.93;MQ0=3;MQRankSum=-1.857;QD=30.20;ReadPosRankSum=0.335;VQSLOD=5.0789;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,36:39:99:1220,102,0	0/0:10,0:10:27.04:0,27,261	0/0:24,0:19:29.28:0,29,329	0/0:25,0:24:37.48:0,37,300	1/1:7,17:24:51.16:616,51,0	0/0:15,0:15:42.07:0,42,406	0/0:24,0:24:69.11:0,69,666	1/1:4,29:34:87.27:1050,87,0	0/0:16,0:16:45.07:0,45,434	1/1:5,24:29:72.21:854,72,0	1/1:0,8:8:24.07:290,24,0	0/0:15,0:15:33.05:0,33,319	0/0:15,0:15:42.07:0,42,406	0/0:17,0:17:51.07:0,51,487	0/0:13,0:13:36.05:0,36,347	0/0:11,0:11:24.69:0,25,257	0/0:27,0:25:70.34:0,70,667	1/1:2,16:18:45.14:541,45,0	0/0:17,0:17:39.06:0,39,376	0/0:14,0:14:39.05:0,39,371	0/0:16,0:16:45.07:0,45,434	0/0:17,0:17:48.08:0,48,463	1/1:6,19:25:66.13:756,66,0	1/1:0,15:15:39.12:471,39,0	0/0:14,0:14:39.06:0,39,377	0/0:15,0:15:42.05:0,42,400	0/0:18,0:18:54.09:0,54,521	0/0:11,0:11:33.05:0,33,319
chr10	69040514	.	G	GTC	259.29	PASS	AB=0.828;AC=4;AF=0.071;AN=56;BaseQRankSum=6.195;DP=814;FS=3.194;HRun=0;HaplotypeScore=133.0138;InbreedingCoeff=-0.0833;MQ=53.75;MQ0=25;MQRankSum=1.725;QD=1.84;ReadPosRankSum=-0.304;VQSLOD=2.4669;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:32,17:48:99:140,0,277	0/0:12,0:12:36.06:0,36,461	0/0:30,0:11:15.41:0,15,173	0/0:59,0:18:27.62:0,28,321	0/1:23,0:22:61.44:61,0,158	0/0:20,0:20:47.64:0,48,557	0/0:32,0:32:92.99:0,93,1016	0/0:30,0:28:74.44:0,74,678	0/0:43,0:43:99:0,123,1541	0/0:22,0:21:7.78:0,8,227	0/0:14,0:13:18.14:0,18,119	0/0:26,0:25:66.06:0,66,824	0/0:27,0:26:66.07:0,66,861	0/0:34,0:34:95.34:0,95,1194	0/0:27,0:27:72.04:0,72,871	0/0:22,0:22:65.94:0,66,838	0/0:36,0:36:93.43:0,93,1147	0/0:18,0:17:8.80:0,9,78	0/0:19,0:18:33.98:0,34,523	0/0:26,0:25:63.13:0,63,849	0/0:76,0:75:99:0,195,2265	0/0:23,0:23:64.23:0,64,736	0/1:21,3:24:55.61:56,0,160	0/1:24,21:45:99:111,0,389	0/0:12,0:11:30.03:0,30,369	0/0:25,0:22:65.96:0,66,748	0/0:20,0:20:51.09:0,51,686	0/0:20,0:20:51.51:0,52,627
chr10	69040516	.	G	GTC	110.40	PASS	AB=0.828;AC=3;AF=0.054;AN=56;BaseQRankSum=6.241;DP=820;FS=1.749;HRun=0;HaplotypeScore=135.1570;InbreedingCoeff=-0.0689;MQ=54.21;MQ0=25;MQRankSum=2.274;QD=0.96;ReadPosRankSum=-1.083;VQSLOD=2.1887;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:36,12:47:57.42:57,0,74	0/0:13,0:13:36.05:0,36,461	0/0:31,0:11:8.94:0,9,120	0/0:60,0:18:21.14:0,21,352	0/1:16,7:22:51.11:66,0,51	0/0:20,0:20:47.81:0,48,556	0/0:32,0:32:90:0,90,994	0/0:32,0:30:74.45:0,74,682	0/0:43,0:43:99:0,123,1534	0/0:22,0:21:16.12:0,16,192	0/0:14,0:13:5.55:0,6,42	0/0:27,0:26:69.07:0,69,872	0/0:28,0:27:69.07:0,69,887	0/0:31,0:31:90.14:0,90,1168	0/0:28,0:28:72.03:0,72,869	0/0:23,0:23:69.08:0,69,871	0/0:35,0:35:93.33:0,93,1147	0/0:17,0:16:5.16:0,5,53	0/0:19,0:18:33.91:0,34,512	0/0:26,0:25:60.14:0,60,817	0/0:77,0:76:99:0,207,2362	0/0:23,0:23:64.29:0,64,743	0/0:22,3:25:19.06:0,19,87	0/1:40,4:44:86.46:87,0,86	0/0:13,0:12:33.03:0,33,394	0/0:26,0:23:65.89:0,66,745	0/0:20,0:20:57.03:0,57,729	0/0:18,0:18:45.53:0,46,578
chr10	69040518	.	G	GTC	691.69	PASS	AB=0.878;AC=7;AF=0.125;AN=56;BaseQRankSum=8.143;DP=820;FS=8.949;HRun=0;HaplotypeScore=132.4736;InbreedingCoeff=0.2458;MQ=54.02;MQ0=30;MQRankSum=1.345;QD=4.02;ReadPosRankSum=-1.389;VQSLOD=2.2282;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:36,12:47:58.07:222,0,58	0/0:13,0:13:39.03:0,39,484	0/0:36,0:11:15.75:0,16,144	0/0:62,0:18:20.79:0,21,352	0/1:17,6:22:25.74:61,0,26	0/0:20,0:20:47.81:0,48,556	0/0:33,0:33:86.85:0,87,960	0/0:32,0:29:74.44:0,74,687	0/0:43,0:43:99:0,126,1556	0/1:22,0:21:24.59:154,0,25	1/1:14,0:13:14.99:147,15,0	0/0:26,0:25:66.07:0,66,828	0/0:28,0:27:66.09:0,66,863	0/0:31,0:31:90.12:0,90,1164	0/0:27,0:27:75.02:0,75,893	0/0:23,0:23:69.04:0,69,866	0/0:33,0:33:92.58:0,93,1141	0/0:18,0:17:1.38:0,1,32	0/0:19,0:18:33.71:0,34,501	0/0:27,0:26:63.15:0,63,858	0/0:76,0:75:99:0,201,2315	0/0:23,0:23:67.17:0,67,759	0/1:20,3:23:1.76:103,0,2	0/1:38,4:42:64.40:139,0,64	0/0:13,0:12:33.02:0,33,394	0/0:27,0:24:71.40:0,71,785	0/0:21,0:21:62.96:0,63,772	0/0:17,0:17:45.54:0,46,582
chr10	69040522	.	G	GTGTGTGTC	1480.25	PASS	AB=0.992;AC=14;AF=0.250;AN=56;BaseQRankSum=5.013;DP=837;FS=2.115;HRun=0;HaplotypeScore=211.5244;InbreedingCoeff=0.4331;MQ=54.02;MQ0=32;MQRankSum=-1.245;QD=4.54;ReadPosRankSum=-5.368;VQSLOD=1.2052;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:49,0:48:99:107,0,114	0/0:13,0:13:33.02:0,33,568	0/1:39,0:11:2.35:2,0,67	0/1:63,0:18:10.90:11,0,183	0/1:20,0:20:29:102,0,29	0/0:22,0:22:56.92:0,57,800	0/0:31,0:32:84.04:0,84,1157	1/1:32,0:29:37.76:471,38,0	0/0:42,0:42:99:0,111,1914	1/1:22,0:21:30.80:352,31,0	1/1:14,0:13:20.98:195,21,0	0/0:29,0:28:72.04:0,72,1256	0/0:26,0:26:65.34:0,65,1047	0/0:34,0:34:90.64:0,91,1629	0/0:33,0:33:87:0,87,1352	0/0:22,0:22:63.04:0,63,1070	0/0:33,0:33:86.33:0,86,1596	1/1:3,11:18:6.02:244,6,0	0/0:19,0:18:41.96:0,42,575	0/0:26,0:25:65.62:0,66,1136	0/0:74,0:73:99:0,194,2480	0/0:22,0:22:41.07:0,41,1048	0/1:25,0:25:27.82:124,0,28	0/1:42,0:42:45.24:45,0,236	0/0:13,0:12:30.05:0,30,581	0/0:29,0:26:51.89:0,52,918	0/0:23,0:23:62.98:0,63,1126	0/0:17,0:17:41.53:0,42,772
chr10	69041610	.	TACACACACACACACACACAAACACACACAC	T	1086.29	PASS	AB=1.000;AC=16;AF=0.286;AN=56;BaseQRankSum=1.057;DP=540;FS=10.564;HRun=0;HaplotypeScore=325.4477;InbreedingCoeff=0.8130;MQ=59.89;MQ0=19;MQRankSum=-0.726;QD=5.43;ReadPosRankSum=2.659;VQSLOD=0.9798;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:31,0:30:47.85:395,48,0	0/0:11,0:11:26.56:0,27,1569	0/1:47,0:22:2.13:2,0,90	0/1:41,0:20:45.83:62,0,46	1/1:15,0:15:15.02:189,15,0	0/0:15,0:15:21.01:0,21,2152	0/0:24,0:23:49.76:0,50,1589	0/0:31,0:30:39.05:0,39,533	0/0:14,0:14:20.67:0,21,643	1/1:13,0:13:21.38:166,21,0	1/1:9,0:9:5.99:48,6,0	0/0:18,0:18:32.30:0,32,1954	0/0:14,0:14:25.42:0,25,795	0/0:18,0:18:39.03:0,39,1700	0/0:19,0:18:37:0,37,2657	0/0:14,0:14:24.05:0,24,1793	0/0:26,0:26:43.39:0,43,3178	1/1:10,0:8:14.83:105,15,0	0/0:17,0:17:25.11:0,25,3441	0/0:14,0:14:30.51:0,31,1615	0/0:38,0:38:61.08:0,61,5149	0/0:14,0:14:30.07:0,30,2195	1/1:6,6:12:11.97:96,12,0	1/1:22,0:21:23.96:215,24,0	0/0:15,0:15:11.06:0,11,1412	0/0:20,0:20:48.08:0,48,3621	0/0:13,0:13:33.03:0,33,1364	0/0:5,0:5:15.02:0,15,1305
chr10	69041630	.	AAC	A	169.95	PASS	AB=0.977;AC=17;AF=0.425;AN=40;BaseQRankSum=2.425;DP=516;FS=2.115;HRun=0;HaplotypeScore=81.1821;InbreedingCoeff=-0.2883;MQ=50.47;MQ0=27;MQRankSum=1.103;QD=0.60;ReadPosRankSum=0.751;VQSLOD=1.0680;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:25:2.98:22,3,0	0/1:13,0:13:23.04:23,0,65	./.	./.	./.	1/1:17,0:17:3.46:25,3,0	0/1:29,0:27:23.10:23,0,78	./.	0/0:14,0:12:0.73:0,1,83	./.	./.	0/1:12,2:13:25.66:26,0,35	0/0:12,0:12:3.01:0,3,44	0/1:22,0:22:2.72:3,0,127	0/1:22,0:21:9.75:10,0,182	0/1:12,2:14:23.12:23,0,77	0/1:34,0:34:35.75:36,0,124	./.	0/0:23,0:22:18.83:0,19,218	0/0:19,0:19:5.32:0,5,64	0/1:43,0:42:2.03:2,0,154	0/1:14,0:14:30.56:46,0,31	1/1:10,0:10:0.47:1,0,0	./.	0/0:20,0:20:4.02:0,4,100	0/0:20,0:19:9.02:0,9,102	0/1:15,0:14:5.15:5,0,25	0/1:7,0:6:21.03:45,0,21
chr10	69042063	.	T	TTC	1720.76	PASS	AB=0.882;AC=25;AF=0.521;AN=48;BaseQRankSum=-4.222;DP=514;FS=0.000;HRun=0;HaplotypeScore=94.4284;InbreedingCoeff=-0.1584;MQ=68.76;MQ0=21;MQRankSum=1.861;QD=5.15;ReadPosRankSum=-0.644;VQSLOD=2.7742;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:15:2.84:0,3,14	0/1:10,0:11:44.35:94,0,44	./.	./.	0/0:5,0:22:17.04:0,17,84	0/1:24,0:25:18.23:100,0,18	1/1:15,1:15:15:162,15,0	1/1:24,0:22:7.20:46,7,0	0/1:10,8:18:41.63:121,0,42	0/1:8,0:8:10.83:20,0,11	./.	0/0:13,0:13:6:0,6,56	0/1:17,2:17:15.17:159,0,15	1/1:9,0:9:4.22:56,4,0	1/1:7,1:7:9.03:136,9,0	1/1:12,0:13:6:51,6,0	0/1:19,1:21:46.23:181,0,46	0/1:19,0:16:0.60:1,0,88	0/1:17,5:19:4.59:99,0,5	0/1:17,6:21:21.28:97,0,21	./.	1/1:9,12:21:6.02:90,6,0	0/0:4,0:13:13.96:0,14,66	0/0:10,0:10:5.77:0,6,39	0/1:12,11:24:16.82:82,0,17	0/1:17,0:17:40.22:117,0,40	0/1:13,6:19:51.47:120,0,51	0/1:13,1:12:18.23:139,0,18
chr10	69042099	.	CCCCCTTCCTTCCTTCCTTCCTTTCTTTCTT	C	337.11	PASS	AB=1.000;AC=5;AF=0.093;AN=54;BaseQRankSum=0.942;DP=437;FS=13.778;HRun=0;HaplotypeScore=249.4434;InbreedingCoeff=0.2607;MQ=45.94;MQ0=31;MQRankSum=1.115;QD=5.44;ReadPosRankSum=-1.858;VQSLOD=1.1233;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:15:21.07:0,21,909	0/0:14,0:14:40.33:0,40,2029	0/0:13,0:1:3.01:0,3,86	./.	0/0:23,0:23:36.12:0,36,1853	0/1:19,0:17:29.65:30,0,2614	0/0:16,0:11:6.15:0,6,994	0/1:19,0:14:4.33:4,0,1488	0/0:18,0:18:36.11:0,36,2659	1/1:1,8:9:19.39:352,19,0	0/0:3,8:10:2.04:0,2,6	0/0:12,0:12:27.09:0,27,2148	0/0:16,0:13:27.08:0,27,1526	0/0:9,0:9:18.52:0,19,941	0/0:16,0:14:30.09:0,30,1673	0/0:8,0:8:17.82:0,18,654	0/0:26,0:22:24.15:0,24,2568	0/1:15,0:13:66.33:66,0,1424	0/0:15,0:14:13.24:0,13,2366	0/0:25,0:22:50.82:0,51,3480	0/0:6,0:3:3.01:0,3,339	0/0:18,0:19:27.09:0,27,1740	0/0:15,0:15:25.81:0,26,862	0/0:10,0:9:22.62:0,23,726	0/0:25,0:25:39.12:0,39,3318	0/0:20,0:20:46.67:0,47,2579	0/0:14,0:14:33.11:0,33,2058	0/0:14,0:14:7.59:0,8,1668
chr10	69042432	.	AAGGAGCAAGAGAAACGT	A	209.17	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.353;DP=607;FS=0.000;HRun=0;HaplotypeScore=263.7775;InbreedingCoeff=0.8430;MQ=78.99;MQ0=0;MQRankSum=-2.363;QD=19.02;ReadPosRankSum=0.423;VQSLOD=1.7737;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:38:99:0,105,8532	0/0:8,0:8:24.08:0,24,1975	0/0:9,0:9:27.09:0,27,1718	0/0:20,0:21:57.18:0,57,3186	0/0:11,0:11:24.08:0,24,1504	0/0:22,0:21:51.18:0,51,3860	0/0:30,0:30:84.26:0,84,5637	0/0:22,0:22:60.20:0,60,3775	0/0:25,0:25:66.23:0,66,5009	0/0:12,0:12:33.11:0,33,2343	0/0:7,0:7:18.06:0,18,1204	0/0:33,0:33:84.28:0,84,6039	0/0:13,0:13:39.13:0,39,3058	0/0:24,0:24:69.24:0,69,4842	0/0:37,0:37:99:0,102,7215	0/0:25,0:25:66.23:0,66,4873	0/0:50,0:50:99:0,135,10066	1/1:6,5:10:6.02:289,6,0	0/0:14,0:14:33.11:0,33,2137	0/0:17,0:17:45.15:0,45,3190	0/0:40,0:40:99:0,105,7847	0/0:25,0:25:75.26:0,75,5841	0/0:11,0:11:30.10:0,30,2279	0/0:29,0:29:81.25:0,81,5818	0/0:19,0:19:48.16:0,48,3713	0/0:20,0:20:57.20:0,57,4399	0/0:28,0:26:72.25:0,72,5198	0/0:4,0:4:12.04:0,12,987
chr10	69043873	.	ATTT	A	1463.59	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=6.566;DP=521;FS=1.921;HRun=13;HaplotypeScore=80.0542;InbreedingCoeff=0.8132;MQ=76.05;MQ0=0;MQRankSum=-0.513;QD=18.53;ReadPosRankSum=4.872;VQSLOD=2.6237;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:42:99:0,120,2038	0/0:5,0:5:9.03:0,9,173	0/0:18,0:17:30.96:0,31,481	0/1:18,0:16:7.47:7,0,251	0/0:20,0:21:57.20:0,57,1053	0/0:22,0:26:67.76:0,68,1173	0/0:21,0:23:54.61:0,55,941	0/0:28,0:29:51.17:0,51,959	0/0:16,0:17:45.11:0,45,762	1/1:6,17:25:53.97:617,54,0	1/1:3,9:12:27.04:328,27,0	0/0:23,0:23:54.18:0,54,994	0/0:20,0:21:54.15:0,54,933	0/0:16,0:19:42.12:0,42,718	0/0:15,0:15:39.12:0,39,703	0/0:13,0:14:33.09:0,33,573	0/0:15,0:15:39.11:0,39,693	1/1:4,20:24:54.08:657,54,0	0/0:16,0:20:45.11:0,45,753	0/0:11,0:11:27.09:0,27,477	0/0:15,0:16:42.13:0,42,760	0/0:6,0:6:12.04:0,12,231	0/0:12,0:13:27.09:0,27,485	0/0:23,0:26:66.15:0,66,1119	0/0:7,0:7:9.03:0,9,173	0/0:25,0:25:54.15:0,54,891	0/0:20,0:23:60.14:0,60,1023	0/0:6,0:6:15.04:0,15,241
chr10	69043997	.	GT	G	628.72	PASS	AB=0.816;AC=7;AF=0.125;AN=56;BaseQRankSum=5.363;DP=524;FS=9.345;HRun=11;HaplotypeScore=52.9615;InbreedingCoeff=0.3952;MQ=69.39;MQ0=9;MQRankSum=2.330;QD=7.14;ReadPosRankSum=-1.877;VQSLOD=0.7148;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:32:86.98:0,87,876	0/0:9,0:9:24.01:0,24,237	0/1:32,0:8:6.67:7,0,40	0/0:35,1:15:16.62:0,17,119	0/0:15,0:15:39.08:0,39,408	0/0:13,0:15:32.92:0,33,334	0/0:17,2:19:1.78:0,2,410	0/1:7,19:26:18.62:375,0,19	0/0:17,0:17:23.48:0,23,435	1/1:4,13:17:38.94:320,39,0	1/1:0,2:2:5.99:48,6,0	0/0:20,0:20:29.67:0,30,512	0/0:16,0:16:39.10:0,39,415	0/0:10,0:10:27.07:0,27,288	0/0:15,1:16:14.45:0,14,359	0/0:10,0:10:30.08:0,30,320	0/0:38,3:41:31.49:0,31,921	0/0:7,0:18:43.29:0,43,257	0/0:24,1:27:41.21:0,41,604	0/1:8,1:9:6.60:7,0,136	0/0:13,0:13:39.06:0,39,403	0/0:11,1:12:2.43:0,2,231	0/0:11,0:11:21.05:0,21,222	0/0:22,0:22:60.11:0,60,616	0/0:10,0:11:3.71:0,4,205	0/0:26,3:29:32.93:0,33,594	0/0:24,1:24:47.52:0,48,696	0/0:12,0:12:33.08:0,33,352
chr10	69044209	.	GTTA	G	153.54	PASS	AC=2;AF=0.043;AN=46;BaseQRankSum=2.635;DP=213;FS=1.582;HRun=0;HaplotypeScore=31.1530;InbreedingCoeff=0.1361;MQ=78.96;MQ0=0;MQRankSum=-0.074;QD=7.68;ReadPosRankSum=0.116;VQSLOD=1.8644;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:12:3.01:0,3,34	0/0:3,0:3:6.02:0,6,116	./.	./.	0/0:10,0:10:3.47:0,3,25	0/0:12,0:12:15.05:0,15,280	./.	0/0:20,0:20:15.05:0,15,269	0/0:1,0:2:3.01:0,3,39	0/0:2,0:3:3.01:0,3,39	0/0:3,0:3:3.01:0,3,39	0/0:8,0:8:6.02:0,6,116	0/0:7,0:7:9.03:0,9,170	0/0:3,0:3:3.01:0,3,58	0/0:3,0:3:3.01:0,3,58	0/0:1,0:3:3.01:0,3,39	0/0:30,1:31:20.16:0,20,1047	1/1:14,6:20:18.06:240,18,0	0/0:10,0:9:3.01:0,3,58	0/0:5,0:5:3.01:0,3,58	0/0:7,0:7:3.01:0,3,58	./.	0/0:6,0:6:6.02:0,6,76	./.	0/0:8,0:8:12.04:0,12,225	0/0:5,0:5:3.01:0,3,58	0/0:7,0:7:3.01:0,3,58	0/0:7,0:7:9.03:0,9,174
chr10	69046250	.	CTT	C	1944.78	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.199;DP=596;FS=4.441;HRun=3;HaplotypeScore=67.3904;InbreedingCoeff=0.9985;MQ=82.24;MQ0=0;MQRankSum=-4.062;QD=40.52;ReadPosRankSum=1.086;VQSLOD=3.3384;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:57.20:0,57,1092	0/0:13,0:13:39.13:0,39,747	0/0:14,0:14:42.11:0,42,754	0/0:20,0:20:60.20:0,60,1084	0/0:23,0:23:69.24:0,69,1327	0/0:27,0:26:81.28:0,81,1564	0/0:14,0:14:42.14:0,42,811	0/0:34,0:34:99:0,102,1925	0/0:19,0:19:57.18:0,57,1057	1/1:1,25:26:75.25:1148,75,0	1/1:0,22:22:60.20:919,60,0	0/0:18,0:18:54.18:0,54,997	0/0:19,0:19:54.17:0,54,995	0/0:14,0:14:41.16:0,41,729	0/0:24,0:24:69.24:0,69,1329	0/0:23,0:23:66.23:0,66,1276	0/0:29,0:29:81.26:0,81,1531	0/0:16,0:16:48.12:0,48,878	0/0:21,0:21:60.21:0,60,1159	0/0:36,0:36:99:0,108,2081	0/0:14,0:14:42.14:0,42,812	0/0:29,0:29:87.30:0,87,1675	0/0:20,0:20:60.21:0,60,1150	0/0:21,0:21:60.19:0,60,1126	0/0:13,0:13:39.13:0,39,722	0/0:26,0:26:29.82:0,30,1340	0/0:34,0:32:93.32:0,93,1789	0/0:8,0:8:24.08:0,24,438
chr10	69046697	.	CGT	C	90.46	PASS	AB=0.975;AC=15;AF=0.278;AN=54;BaseQRankSum=2.289;DP=566;FS=3.143;HRun=0;HaplotypeScore=87.0666;InbreedingCoeff=-0.1951;MQ=64.24;MQ0=7;MQRankSum=1.366;QD=0.35;ReadPosRankSum=1.682;VQSLOD=1.7293;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:23:0.47:1,0,0	0/1:5,2:7:21.41:27,0,21	0/0:25,0:15:3.48:0,3,36	0/0:27,0:25:2.60:0,3,10	0/0:16,0:16:2.99:0,3,24	0/1:21,0:21:26.63:27,0,112	0/1:24,0:24:14.10:14,0,263	0/1:24,0:22:7:7,0,22	0/0:14,0:14:20.93:0,21,213	0/0:25,0:25:5.88:0,6,37	./.	0/1:21,0:21:34.89:35,0,211	0/1:14,0:14:18.45:18,0,121	0/0:13,0:13:12.01:0,12,99	0/1:17,0:17:3.42:3,0,237	0/1:15,1:17:14.97:15,0,90	0/0:36,4:40:6.78:0,7,601	0/0:10,0:9:0.47:0,0,1	0/0:18,0:17:18.07:0,18,166	0/1:14,0:14:42.16:42,0,77	0/0:60,0:58:2.24:0,2,307	0/0:20,1:22:15.89:0,16,328	0/0:11,0:11:3:0,3,25	1/1:26,0:26:1.95:6,2,0	0/1:24,0:24:19.84:20,0,241	0/1:23,0:23:7.37:7,0,244	0/0:14,0:14:27:0,27,312	0/0:10,0:10:16.60:0,17,129
chr10	69046726	.	GTGTGTGTA	G	535.04	PASS	AB=1.000;AC=15;AF=0.278;AN=54;BaseQRankSum=0.983;DP=635;FS=0.470;HRun=0;HaplotypeScore=163.4017;InbreedingCoeff=0.0835;MQ=49.37;MQ0=13;MQRankSum=-2.086;QD=1.93;ReadPosRankSum=-7.348;VQSLOD=0.4696;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:22:20.79:173,21,0	0/1:12,0:12:42.68:43,0,219	0/0:11,0:6:2.38:0,2,27	0/0:6,0:5:3.01:0,3,34	1/1:6,9:15:2.98:22,3,0	0/0:22,0:22:17.34:0,17,592	0/0:41,0:40:69.48:0,69,1365	0/1:29,0:24:16.70:17,0,103	0/0:25,0:25:6.53:0,7,655	0/1:20,0:18:38.29:182,0,38	0/0:10,0:10:0.36:0,0,1	0/1:28,0:28:17.26:17,0,1077	0/1:16,0:15:6.07:6,0,535	0/1:19,0:19:31.72:32,0,413	0/0:25,0:25:56.88:0,57,1000	0/0:26,0:26:23.93:0,24,936	0/0:44,0:43:48.56:0,49,2253	1/1:10,0:9:6.73:133,7,0	0/0:19,0:18:4.25:0,4,794	0/0:21,0:21:4.62:0,5,606	0/1:74,0:71:15.92:16,0,1467	0/0:29,0:28:28.81:0,29,1291	./.	0/1:25,0:24:1.31:18,0,1	0/0:23,0:23:7.92:0,8,979	0/0:28,0:28:27.41:0,27,930	0/0:19,0:19:26.55:0,27,973	0/1:7,0:7:30.39:30,0,125
chr10	69046732	.	GTA	G	1085.75	PASS	AB=0.994;AC=25;AF=0.463;AN=54;BaseQRankSum=5.010;DP=609;FS=14.324;HRun=0;HaplotypeScore=103.9765;InbreedingCoeff=-0.1808;MQ=49.93;MQ0=10;MQRankSum=-1.568;QD=2.29;ReadPosRankSum=-3.833;VQSLOD=-0.7639;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:18,2:20:20.94:173,21,0	0/1:12,0:12:67.72:69,0,68	0/0:7,0:2:3:0,3,28	0/0:5,0:2:5.81:0,6,47	1/1:12,0:12:2.68:11,3,0	0/1:20,0:20:74.84:75,0,192	0/1:40,0:39:8.53:9,0,525	0/1:31,0:26:43.42:85,0,43	0/0:24,1:25:3.57:0,4,277	1/1:16,0:14:29.33:213,29,0	0/1:9,0:9:0.01:0,0,0	0/1:29,0:29:99:110,0,245	0/1:16,0:15:25.77:26,0,168	0/1:22,0:22:24.05:24,0,186	0/0:24,0:24:58.93:0,59,505	0/1:24,0:24:13.72:14,0,208	0/1:45,0:44:12.11:12,0,774	1/1:10,0:10:12.94:160,13,0	0/0:18,0:18:12.20:0,12,287	0/1:21,1:22:15.77:16,0,250	0/1:66,0:63:99:111,0,381	0/0:29,0:28:33.09:0,33,533	./.	1/1:22,0:21:0.09:19,0,0	0/1:21,1:22:61.62:62,0,310	0/1:29,0:29:11.28:11,0,439	0/0:18,0:18:20.22:0,20,358	0/1:8,0:8:46.85:47,0,66
chr10	69046786	.	TTG	T	903.65	PASS	AB=0.960;AC=8;AF=0.143;AN=56;BaseQRankSum=3.446;DP=753;FS=4.899;HRun=0;HaplotypeScore=146.1242;InbreedingCoeff=0.5625;MQ=64.68;MQ0=3;MQRankSum=0.705;QD=8.29;ReadPosRankSum=-2.642;VQSLOD=2.9587;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:13:2.17:11,2,0	0/0:15,1:16:2.58:0,3,493	0/0:37,0:22:30.95:0,31,332	0/0:45,0:26:28.73:0,29,349	0/0:6,0:6:2.49:0,2,23	0/0:28,0:28:63.21:0,63,972	0/1:21,2:23:26.48:26,0,350	1/1:24,25:49:71.95:808,72,0	0/0:38,0:38:99:0,105,1556	0/0:12,0:29:58.98:0,59,502	0/0:10,0:15:19.24:0,19,125	0/0:21,0:21:57.19:0,57,905	0/0:22,0:22:51.12:0,51,776	0/0:29,1:30:69.22:0,69,1048	0/0:29,0:29:37.91:0,38,891	0/0:35,0:35:78.25:0,78,1211	0/0:26,0:26:57.18:0,57,853	1/1:5,6:10:17.72:190,18,0	0/0:22,0:21:30.03:0,30,385	0/0:23,2:25:12.54:0,13,681	0/0:71,0:71:99:0,121,2210	0/0:26,0:27:57.12:0,57,808	0/1:13,0:13:1.16:1,0,20	0/0:26,0:26:2.51:0,3,25	0/0:27,0:27:57.65:0,58,872	0/0:32,0:33:78.25:0,78,1213	0/0:20,1:21:51.16:0,51,774	0/0:13,0:13:39.13:0,39,621
chr10	69046948	.	GGT	G	891.03	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.467;DP=1007;FS=3.205;HRun=0;HaplotypeScore=140.6846;InbreedingCoeff=0.9844;MQ=59.24;MQ0=1;MQRankSum=2.895;QD=21.22;ReadPosRankSum=-3.018;VQSLOD=3.5919;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:44,1:45:84.79:0,85,1932	0/0:11,0:11:27.09:0,27,455	0/0:29,0:18:36.12:0,36,480	0/0:33,0:19:15.50:0,15,403	0/0:35,0:35:96.31:0,96,1586	0/0:27,0:27:72.25:0,72,1211	0/0:30,0:30:80.93:0,81,1291	1/1:15,27:41:78.70:986,79,0	0/0:56,1:57:99:0,109,2304	0/0:50,0:49:99:0,126,2086	0/0:21,0:21:57.18:0,57,935	0/0:35,0:34:87.30:0,87,1430	0/0:34,1:36:54.71:0,55,1456	0/0:53,0:53:99:0,141,2353	0/0:51,0:51:99:0,154,2567	0/0:32,0:32:84.29:0,84,1403	0/0:35,0:35:87.13:0,87,1370	0/0:25,0:24:60.21:0,60,1012	0/0:21,0:21:51.17:0,51,834	0/0:29,0:29:78.27:0,78,1316	0/0:121,2:121:99:0,236,4956	0/0:29,0:29:84.29:0,84,1409	0/0:29,0:29:69.23:0,69,1134	0/0:44,0:43:85.44:0,85,1331	0/0:22,0:22:60.20:0,60,1001	0/0:29,0:29:78.26:0,78,1295	0/0:23,0:21:57.17:0,57,909	0/0:11,0:11:30.10:0,30,506
chr10	69047041	.	AGTGTGT	A	1393.55	PASS	AB=0.646;AC=7;AF=0.125;AN=56;BaseQRankSum=8.084;DP=847;FS=0.682;HRun=0;HaplotypeScore=199.6243;InbreedingCoeff=0.8425;MQ=56.12;MQ0=6;MQRankSum=-8.222;QD=14.98;ReadPosRankSum=-1.255;VQSLOD=2.8324;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:14,17:31:1.62:335,0,2	0/0:15,0:15:33.11:0,33,1011	0/0:41,0:18:21.07:0,21,588	0/0:41,0:22:20.58:0,21,890	1/1:5,15:19:30.55:548,31,0	0/0:34,0:35:75.26:0,75,2399	0/0:30,0:31:54.18:0,54,1655	0/0:36,0:54:99:0,101,1524	0/0:39,0:40:87.29:0,87,2745	0/0:21,0:40:80.37:0,80,1000	0/0:7,0:10:21.07:0,21,297	0/0:33,0:34:80.58:0,81,2555	0/0:49,0:50:99:0,114,3495	0/0:34,0:35:81.24:0,81,2571	0/0:36,0:36:78.27:0,78,2586	0/0:28,0:28:69.22:0,69,2141	0/0:27,0:28:57.15:0,57,1679	0/0:8,0:16:2.50:0,2,83	0/0:15,0:14:24.08:0,24,722	0/0:25,0:25:68.20:0,68,2155	0/0:59,0:59:99:0,126,3880	0/0:30,0:31:66.23:0,66,2018	1/1:6,6:12:21.07:359,21,0	1/1:16,14:30:18.92:299,19,0	0/0:23,0:23:51.18:0,51,1661	0/0:28,0:28:75.26:0,75,2395	0/0:30,0:30:63.22:0,63,2030	0/0:6,0:5:12.04:0,12,388
chr10	69047093	.	AAGAG	A	1463.97	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=7.855;DP=783;FS=7.304;HRun=0;HaplotypeScore=166.1896;InbreedingCoeff=0.8605;MQ=58.03;MQ0=12;MQRankSum=-8.171;QD=17.85;ReadPosRankSum=-1.208;VQSLOD=2.6418;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:34:69.22:0,69,1625	0/0:18,0:18:54.14:0,54,1176	0/1:34,0:9:0.86:1,0,172	0/0:41,0:9:18.03:0,18,247	0/0:14,0:13:24.05:0,24,476	0/0:38,0:38:96.08:0,96,2210	0/0:28,0:28:75.24:0,75,1792	0/0:30,0:29:69.22:0,69,1634	0/0:35,0:35:93.30:0,93,2202	1/1:16,23:38:87.05:1296,87,0	1/1:1,8:9:23.91:288,24,0	0/0:36,0:36:93.29:0,93,2201	0/0:32,0:32:81.25:0,81,1935	0/0:45,0:45:99:0,126,3002	0/0:34,0:35:86.87:0,87,2056	0/0:28,0:28:75.26:0,75,1854	0/0:18,0:18:51.16:0,51,1240	0/0:3,0:11:19.44:0,19,100	0/0:15,0:15:36.09:0,36,779	0/0:16,0:16:45.13:0,45,938	0/0:44,0:45:99:0,114,2688	0/0:27,1:28:61.23:0,61,1579	0/0:14,0:14:27.09:0,27,648	0/0:34,0:34:54.40:0,54,1182	0/0:25,0:25:69.19:0,69,1532	0/0:35,0:35:93.26:0,93,2068	0/0:31,0:31:87.26:0,87,2058	0/0:15,0:14:33.98:0,34,787
chr10	69047115	.	GGT	G	2021.66	PASS	AB=0.610;AC=8;AF=0.143;AN=56;BaseQRankSum=8.850;DP=791;FS=0.473;HRun=0;HaplotypeScore=134.8027;InbreedingCoeff=0.7474;MQ=56.69;MQ0=11;MQRankSum=2.395;QD=19.07;ReadPosRankSum=1.281;VQSLOD=4.0342;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:12,19:31:63.67:773,64,0	0/0:13,0:13:30.08:0,30,459	0/0:25,0:9:6.69:0,7,85	0/0:36,0:13:18.15:0,18,178	1/1:10,8:17:33.04:406,33,0	0/0:36,0:36:90.31:0,90,1463	0/0:30,0:29:16.03:0,16,691	0/0:42,0:41:81.25:0,81,1273	0/0:34,1:34:47.34:0,47,1278	0/0:40,0:39:99:0,107,1254	0/0:13,0:13:32.70:0,33,360	0/0:28,1:29:35.34:0,35,1079	0/0:33,0:33:90.30:0,90,1423	0/0:48,0:49:99:0,120,1889	0/0:39,0:39:99:0,108,1749	0/0:34,0:34:96.33:0,96,1561	0/0:19,0:19:32.57:0,33,596	0/1:4,0:9:2.32:38,0,2	0/0:18,0:16:27.09:0,27,430	0/0:21,0:21:39.12:0,39,604	0/0:44,0:42:93.25:0,93,1474	0/0:22,1:23:20.25:0,20,844	0/1:4,11:15:17.09:267,0,17	1/1:9,24:33:59.51:692,60,0	0/0:22,0:22:48.12:0,48,752	0/0:35,1:36:33.55:0,34,1286	0/0:31,0:31:75.21:0,75,1170	0/0:17,0:16:48.16:0,48,740
chr10	69047134	.	AAG	A	1344.94	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=8.966;DP=745;FS=2.007;HRun=0;HaplotypeScore=135.8095;InbreedingCoeff=0.8095;MQ=56.34;MQ0=9;MQRankSum=-1.994;QD=18.42;ReadPosRankSum=0.253;VQSLOD=3.9314;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:65.90:0,66,861	0/0:10,0:10:24.08:0,24,398	0/1:16,0:12:5.96:6,0,180	0/0:25,0:9:21.50:0,21,299	0/0:21,0:21:51.13:0,51,697	0/0:34,0:34:90.29:0,90,1471	0/0:23,0:22:57.19:0,57,929	0/0:41,0:41:78.27:0,78,1278	0/0:34,0:33:78.27:0,78,1284	1/1:10,30:40:84.32:1161,84,0	1/1:2,14:16:26.99:304,27,0	0/0:25,0:25:63.21:0,63,1028	0/0:38,0:38:99:0,102,1637	0/0:39,1:40:99:0,102,1688	0/0:41,0:41:99:0,105,1710	0/0:35,0:35:90.31:0,90,1492	0/0:15,0:15:36.12:0,36,598	0/0:10,0:10:15.05:0,15,221	0/0:17,0:15:33.08:0,33,479	0/0:22,0:22:48.16:0,48,771	0/0:36,0:33:63.20:0,63,996	0/0:22,0:22:48.16:0,48,797	0/0:17,0:17:33.01:0,33,486	0/0:34,0:34:60.94:0,61,844	0/0:21,0:21:48.14:0,48,749	0/0:32,1:33:49.40:0,49,1322	0/0:29,0:29:75.23:0,75,1217	0/0:17,0:16:48.16:0,48,786
chr10	69047201	.	GTC	G	1253.88	PASS	AB=0.979;AC=16;AF=0.286;AN=56;BaseQRankSum=4.356;DP=730;FS=2.209;HRun=0;HaplotypeScore=155.7620;InbreedingCoeff=0.2775;MQ=63.97;MQ0=13;MQRankSum=3.270;QD=4.90;ReadPosRankSum=3.824;VQSLOD=2.9381;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:18,6:24:23.95:228,24,0	0/0:11,0:11:20.71:0,21,238	0/0:34,0:15:8.60:0,9,49	0/0:51,0:24:6.05:0,6,62	1/1:30,7:37:56.86:486,57,0	0/1:29,0:29:12.12:12,0,665	0/0:23,2:25:9.79:0,10,474	0/0:55,0:54:64.53:0,65,455	0/1:23,0:23:9.37:9,0,510	0/0:39,0:37:75.53:0,76,776	0/0:19,0:20:22.42:0,22,191	0/1:18,1:20:83.13:83,0,395	0/0:32,0:32:53.85:0,54,639	0/0:17,3:21:6.95:0,7,499	0/0:28,0:28:4.64:0,5,556	0/1:23,0:23:66.91:67,0,173	0/1:11,1:11:52.32:52,0,102	0/1:10,0:10:7.80:8,0,54	0/1:13,0:13:17.09:17,0,172	0/0:32,1:33:22.50:0,23,650	0/0:29,0:29:11.72:0,12,528	0/0:7,0:26:12.02:0,12,140	1/1:17,4:21:26.94:255,27,0	1/1:18,3:21:23.97:210,24,0	0/1:22,1:23:3.22:3,0,365	0/0:18,0:18:45.01:0,45,543	0/0:37,1:38:45.20:0,45,1012	0/0:13,0:13:17.73:0,18,246
chr10	69047223	.	CTCTG	C	2242.54	PASS	AB=0.978;AC=10;AF=0.179;AN=56;BaseQRankSum=6.801;DP=782;FS=4.047;HRun=0;HaplotypeScore=186.9485;InbreedingCoeff=0.6719;MQ=56.35;MQ0=20;MQRankSum=1.925;QD=14.02;ReadPosRankSum=-4.161;VQSLOD=2.6308;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:26,3:29:44.72:512,45,0	0/0:12,0:12:30.04:0,30,463	0/0:25,0:4:8.60:0,9,49	0/0:34,0:9:8.37:0,8,73	1/1:42,3:44:92.01:851,92,0	0/0:37,0:37:66.28:0,66,1386	0/0:27,0:27:43.30:0,43,1038	0/0:37,0:36:92.55:0,93,689	0/0:27,0:27:8.96:0,9,1060	0/0:39,0:36:95.47:0,95,1234	0/0:21,0:21:23.73:0,24,296	0/1:21,0:22:19.26:19,0,800	0/0:31,0:31:58.82:0,59,1210	0/0:27,0:27:68.43:0,68,1047	0/0:31,0:31:30.03:0,30,1268	0/0:20,0:20:1.22:0,1,663	0/0:13,0:12:7.09:0,7,219	0/1:10,0:10:4.83:5,0,97	0/0:13,0:12:15.27:0,15,401	0/0:44,0:44:99:0,101,1473	0/0:38,0:36:46.41:0,46,1167	0/0:38,0:37:42.02:0,42,571	1/1:27,1:28:53.73:582,54,0	1/1:24,1:23:39.81:437,40,0	0/0:30,0:30:7.85:0,8,746	0/0:30,0:30:73.58:0,74,1090	0/0:39,0:38:99:0,111,2000	0/0:9,0:9:24.07:0,24,522
chr10	69047225	.	C	CTGTGTG	1034.25	PASS	AB=0.929;AC=7;AF=0.130;AN=54;BaseQRankSum=4.959;DP=797;FS=0.000;HRun=0;HaplotypeScore=230.8670;InbreedingCoeff=0.7678;MQ=56.04;MQ0=21;MQRankSum=-4.083;QD=8.99;ReadPosRankSum=-2.276;VQSLOD=1.6662;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:39.23:0,39,538	0/0:13,0:13:24.04:0,24,385	./.	0/0:34,0:9:2.94:0,3,18	0/0:45,0:43:50.43:0,50,773	0/0:37,0:37:69.17:0,69,1262	0/0:27,0:27:51.15:0,51,965	0/0:40,0:38:19.17:0,19,172	0/0:27,0:27:63.20:0,63,1243	1/1:44,1:40:48.54:857,49,0	1/1:18,3:22:10.83:186,11,0	0/0:21,0:21:46.03:0,46,843	0/0:30,0:30:63.20:0,63,1196	0/0:27,0:27:60.03:0,60,1165	0/0:32,0:32:71.66:0,72,1318	0/0:20,0:20:54.10:0,54,820	0/0:13,0:12:24.08:0,24,430	1/1:4,0:9:6.02:118,6,0	0/0:14,0:12:25.64:0,26,479	0/0:44,0:44:84.90:0,85,1820	0/1:36,0:37:4.86:5,0,532	0/0:39,0:38:51.62:0,52,938	0/0:27,0:27:44.53:0,45,595	0/0:27,0:25:30.24:0,30,395	0/0:30,0:30:42.14:0,42,871	0/0:32,0:32:63.12:0,63,1220	0/0:39,0:38:99:0,102,1909	0/0:9,0:9:24.08:0,24,493
chr10	69047244	.	TGTGA	T	2897.52	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=4.420;DP=767;FS=2.804;HRun=0;HaplotypeScore=174.4288;InbreedingCoeff=0.5972;MQ=55.41;MQ0=20;MQRankSum=3.581;QD=14.27;ReadPosRankSum=-4.288;VQSLOD=2.3533;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:26,6:32:50.65:663,51,0	0/0:14,0:14:32.71:0,33,515	0/0:25,0:5:4.63:0,5,40	0/0:27,0:6:5.02:0,5,92	1/1:35,5:38:77.20:968,77,0	0/0:33,0:33:54.10:0,54,1386	0/0:28,0:28:52.54:0,53,1236	0/0:37,0:36:11.21:0,11,862	0/0:26,0:26:48.39:0,48,1187	0/1:41,0:37:19.15:19,0,534	0/1:23,0:23:56.61:115,0,57	0/0:22,0:22:7.04:0,7,868	0/0:25,0:25:70.62:0,71,1283	0/0:25,0:25:40.23:0,40,1140	0/0:32,0:32:79.16:0,79,1546	0/0:24,0:24:61.50:0,62,1197	0/1:15,0:14:24.40:24,0,327	0/0:10,0:10:23.90:0,24,241	0/0:17,0:12:18.52:0,19,570	0/0:43,0:43:79.54:0,80,1759	0/0:38,0:35:41.24:0,41,1348	0/0:38,0:37:52.95:0,53,1109	1/1:22,3:26:53.90:707,54,0	1/1:24,2:24:39.03:572,39,0	0/0:19,0:19:41.81:0,42,871	0/0:29,0:29:87:0,87,1363	0/0:43,0:42:99:0,111,1800	0/0:9,0:9:26.75:0,27,584
chr10	69047246	.	TGA	T	1868.10	PASS	AB=0.964;AC=17;AF=0.304;AN=56;BaseQRankSum=8.084;DP=771;FS=1.417;HRun=0;HaplotypeScore=153.3104;InbreedingCoeff=0.3596;MQ=56.25;MQ0=17;MQRankSum=0.189;QD=5.68;ReadPosRankSum=-2.254;VQSLOD=3.1527;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:31,1:32:34.37:345,34,0	0/1:11,3:14:12.32:12,0,252	0/0:24,0:7:7.62:0,8,62	0/1:29,0:8:23.90:24,0,71	1/1:37,1:36:59.83:589,60,0	0/0:32,0:32:41.38:0,41,726	0/0:28,0:28:59.96:0,60,700	0/1:33,3:35:5.25:5,0,605	0/0:26,0:26:12.96:0,13,612	0/1:42,0:38:42.41:145,0,42	1/1:23,0:23:19.80:157,20,0	0/0:21,0:21:2.39:0,2,402	0/0:25,0:25:17.44:0,17,675	0/0:24,0:25:39.46:0,39,654	0/0:32,0:32:15.16:0,15,809	0/0:24,0:24:48.10:0,48,637	0/1:16,0:15:60.34:60,0,226	0/0:8,0:9:23.89:0,24,196	0/0:18,0:13:27:0,27,339	0/0:47,0:47:56.45:0,56,1031	0/0:37,0:34:1.54:0,2,698	0/1:38,0:37:6.38:6,0,712	1/1:27,0:27:39.05:394,39,0	1/1:23,2:23:29.76:302,30,0	0/0:18,1:19:16.63:0,17,453	0/0:29,0:29:57.05:0,57,747	0/0:44,1:44:4:0,4,823	0/1:9,0:9:9.18:9,0,307
chr10	69048713	.	A	ATC	1256.06	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-6.594;DP=686;FS=5.792;HRun=0;HaplotypeScore=91.3587;InbreedingCoeff=0.9923;MQ=85.20;MQ0=0;MQRankSum=-0.104;QD=29.21;ReadPosRankSum=1.505;VQSLOD=5.1609;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:51:99:0,138,1640	0/0:11,0:11:21.06:0,21,248	0/0:40,0:37:69.18:0,69,729	0/0:58,0:46:45.90:0,46,654	0/0:28,0:28:78.23:0,78,939	0/0:15,0:15:39.09:0,39,446	0/0:27,0:27:63.19:0,63,765	0/0:37,0:37:84.22:0,84,986	0/0:20,0:20:57.18:0,57,702	1/1:12,17:29:17.24:788,17,0	1/1:1,13:14:36.12:587,36,0	0/0:22,0:22:63.18:0,63,755	0/0:13,0:13:39.11:0,39,469	0/0:20,0:20:48.14:0,48,579	0/0:23,0:23:60.15:0,60,704	0/0:15,0:15:45.14:0,45,554	0/0:21,0:22:53.98:0,54,627	0/0:17,0:17:42.13:0,42,517	0/0:18,0:18:39.12:0,39,480	0/0:16,0:16:42.12:0,42,503	0/0:23,0:23:60.18:0,60,727	0/0:20,0:20:45.14:0,45,554	0/0:24,0:24:66.18:0,66,790	0/0:26,0:27:60.01:0,60,704	0/0:25,0:25:60.18:0,60,728	0/0:21,0:21:29.22:0,29,637	0/0:30,0:31:87.09:0,87,1035	0/0:19,0:19:36.08:0,36,409
chr10	69049268	.	T	TCTC	10574.19	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-11.753;DP=587;FS=4.068;HRun=0;HaplotypeScore=82.2099;InbreedingCoeff=0.9771;MQ=83.76;MQ0=0;MQRankSum=-2.712;QD=56.85;ReadPosRankSum=1.042;VQSLOD=6.9265;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,35:38:84.29:2013,84,0	0/0:4,0:4:12.04:0,12,224	0/0:18,0:18:54.16:0,54,915	0/0:19,0:20:41.64:0,42,899	1/1:0,16:17:36.12:886,36,0	0/0:24,0:24:72.23:0,72,1288	0/0:26,0:26:75.24:0,75,1345	1/1:0,31:32:90.26:1901,90,0	0/0:23,0:23:69.24:0,69,1279	1/1:4,23:27:75.26:1706,75,0	1/1:1,11:14:33.11:751,33,0	0/0:18,0:18:51.17:0,51,942	0/0:20,0:20:57.15:0,57,1016	0/0:21,0:21:57.19:0,57,1043	0/0:24,0:24:72.21:0,72,1250	0/0:8,0:8:24.08:0,24,447	0/0:31,0:31:93.24:0,93,1587	1/1:0,20:20:54.18:1289,54,0	0/0:25,0:25:75.20:0,75,1211	0/0:18,0:18:54.17:0,54,948	0/0:34,0:34:99:0,102,1812	0/0:16,0:16:48.16:0,48,851	1/1:1,14:17:42.05:994,42,0	1/1:0,19:21:42.14:1034,42,0	0/0:20,0:19:60.16:0,60,992	0/0:19,0:19:6.23:0,6,884	0/0:23,0:23:69.24:0,69,1268	0/0:9,0:9:21.07:0,21,391
chr10	69049339	.	TCTGA	T	726.78	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.272;DP=487;FS=6.841;HRun=0;HaplotypeScore=88.7792;InbreedingCoeff=0.9677;MQ=86.42;MQ0=0;MQRankSum=-5.442;QD=38.25;ReadPosRankSum=-0.042;VQSLOD=3.3466;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:66.23:0,66,1720	0/0:6,0:6:18.06:0,18,467	0/0:17,0:17:44.36:0,44,1057	0/0:22,0:22:63.21:0,63,1497	0/0:12,0:12:33.11:0,33,826	0/0:13,0:13:33.10:0,33,810	0/0:23,0:23:60.21:0,60,1571	0/0:23,0:23:54.19:0,54,1415	0/0:15,0:15:36.12:0,36,925	1/1:1,11:12:36.12:654,36,0	1/1:2,5:7:12.04:189,12,0	0/0:16,0:16:48.16:0,48,1257	0/0:9,0:9:24.08:0,24,628	0/0:14,0:14:42.14:0,42,1070	0/0:22,0:22:63.20:0,63,1593	0/0:10,0:10:30.10:0,30,786	0/0:38,0:38:99:0,99,2583	0/0:32,0:32:87.30:0,87,2278	0/0:22,0:22:60.21:0,60,1502	0/0:17,0:17:51.18:0,51,1307	0/0:31,0:31:87.30:0,87,2262	0/0:8,0:8:17.89:0,18,471	0/0:12,0:12:24.08:0,24,628	0/0:24,0:24:63.22:0,63,1647	0/0:7,0:7:18.06:0,18,470	0/0:16,0:16:42.14:0,42,1064	0/0:21,0:21:57.20:0,57,1464	0/0:9,0:9:24.08:0,24,628
chr10	69052188	.	CTT	C	1779.24	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=6.025;DP=479;FS=1.260;HRun=10;HaplotypeScore=66.4909;InbreedingCoeff=0.9697;MQ=69.75;MQ0=0;MQRankSum=1.219;QD=20.93;ReadPosRankSum=2.591;VQSLOD=2.8242;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,25:29:57.14:635,57,0	0/0:4,0:4:12.04:0,12,190	0/0:10,0:10:12:0,12,131	0/0:12,0:13:13.91:0,14,179	1/1:2,21:23:48.10:535,48,0	0/0:15,0:15:42.10:0,42,638	0/0:17,0:17:48.03:0,48,679	0/0:11,0:28:57.06:0,57,581	0/0:15,0:16:45.10:0,45,667	0/0:7,0:24:51.09:0,51,525	0/0:3,0:14:24.03:0,24,228	0/0:12,0:12:30.05:0,30,427	0/0:10,0:10:24.08:0,24,381	0/0:13,0:13:27.09:0,27,415	0/0:29,0:29:72.18:0,72,1067	0/0:18,0:18:51.13:0,51,782	0/0:23,0:24:57.14:0,57,812	0/0:1,0:11:24.04:0,24,231	0/0:13,0:16:36.38:0,36,437	0/0:19,0:20:59.69:0,60,900	0/0:18,0:18:48.16:0,48,762	0/0:7,0:7:21.07:0,21,333	1/1:1,11:12:27.06:301,27,0	1/1:2,19:21:42.10:468,42,0	0/0:20,0:20:60.18:0,60,909	0/0:21,0:22:60.19:0,60,894	0/0:25,0:26:59.56:0,60,829	0/0:5,0:5:15.03:0,15,213
chr10	69055798	.	TTCTC	T	2410.47	PASS	AB=0.929;AC=38;AF=0.731;AN=52;BaseQRankSum=1.393;DP=497;FS=20.331;HRun=0;HaplotypeScore=95.5533;InbreedingCoeff=0.5300;MQ=65.73;MQ0=13;MQRankSum=-0.246;QD=8.64;ReadPosRankSum=1.526;VQSLOD=1.0681;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:24:17.87:0,18,241	./.	0/0:49,0:23:6.02:0,6,81	0/0:68,0:28:2.29:0,2,38	0/1:10,1:12:6.48:41,0,6	1/1:16,6:22:9.02:141,9,0	1/1:8,2:10:3.01:47,3,0	0/0:20,0:20:3.73:0,4,16	1/1:7,1:10:12.02:150,12,0	1/1:7,0:14:18.02:169,18,0	1/1:15,0:18:7.57:69,8,0	1/1:7,4:11:8.86:139,9,0	1/1:9,6:15:9.03:141,9,0	1/1:5,6:11:9.03:141,9,0	1/1:10,7:17:12.03:168,12,0	1/1:13,11:26:36.08:481,36,0	1/1:10,5:14:6.01:94,6,0	0/1:12,0:11:18.52:19,0,236	1/1:9,2:11:5.99:94,6,0	1/1:10,3:14:12.02:149,12,0	1/1:19,6:25:10.84:146,11,0	1/1:4,2:8:6.02:88,6,0	0/0:15,0:19:12.01:0,12,172	0/0:19,0:20:27.09:0,27,457	1/1:7,1:9:9.01:102,9,0	./.	1/1:4,6:11:12.03:169,12,0	1/1:8,0:8:2.99:24,3,0
chr10	69056733	.	C	CCGCGCGCG	1058.42	PASS	AC=2;AF=0.037;AN=54;BaseQRankSum=4.728;DP=521;FS=6.306;HRun=0;HaplotypeScore=144.5483;InbreedingCoeff=0.8758;MQ=61.53;MQ0=8;MQRankSum=-5.834;QD=50.40;ReadPosRankSum=0.387;VQSLOD=3.0549;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:78.26:0,78,1608	0/0:11,0:11:27.09:0,27,647	0/0:22,0:12:27.05:0,27,571	0/0:21,0:14:29.46:0,29,701	0/0:15,0:13:22.72:0,23,401	0/0:14,0:14:30.10:0,30,626	0/0:30,0:30:78.24:0,78,1923	0/0:18,0:17:39.60:0,40,981	0/0:16,0:16:42.10:0,42,1064	0/0:14,0:14:27.13:0,27,554	0/0:13,0:13:5.52:0,6,152	0/0:18,0:17:39.11:0,39,961	0/0:23,0:23:51.16:0,51,1190	0/0:16,0:16:39.13:0,39,993	0/0:14,0:14:33.06:0,33,763	0/0:16,0:15:42.13:0,42,799	0/0:25,0:25:72.18:0,72,1818	1/1:9,8:21:34.51:1153,35,0	0/0:18,0:16:39.08:0,39,968	0/0:6,0:6:14.88:0,15,331	0/0:42,0:42:99:0,102,2520	0/0:18,0:18:54.05:0,54,1177	0/0:11,0:11:24.08:0,24,619	0/0:31,0:31:57.16:0,57,1011	0/0:14,0:14:32.13:0,32,695	0/0:15,0:15:45.15:0,45,1150	0/0:15,0:15:45.13:0,45,1098	./.
chr10	69056734	.	C	CGTGTGT	381.05	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=5.449;DP=524;FS=0.000;HRun=0;HaplotypeScore=130.8361;InbreedingCoeff=0.5655;MQ=60.61;MQ0=8;MQRankSum=-3.448;QD=11.55;ReadPosRankSum=2.312;VQSLOD=2.6858;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:77.40:0,77,1091	0/0:10,0:10:30.06:0,30,512	0/0:21,0:11:20.25:0,20,406	0/0:21,0:14:35.85:0,36,616	0/0:15,0:13:26.55:0,27,346	0/0:14,0:14:33.09:0,33,505	0/0:29,0:29:84.18:0,84,1567	0/0:18,0:17:42.12:0,42,653	0/0:16,0:16:42.12:0,42,825	1/1:2,10:13:21.78:340,22,0	0/0:3,10:14:2.51:0,3,11	0/0:18,0:17:42.05:0,42,825	0/0:24,0:24:54.06:0,54,904	0/0:15,0:15:39.13:0,39,838	0/0:14,0:14:39.09:0,39,666	0/0:16,0:15:42.06:0,42,507	0/0:25,0:25:75.16:0,75,1368	0/1:20,0:20:38.28:146,0,38	0/0:19,0:17:38.76:0,39,703	0/0:6,0:6:18.03:0,18,315	0/0:43,0:43:99:0,105,2078	0/0:19,0:19:54.12:0,54,942	0/0:12,0:12:27.04:0,27,374	0/0:31,0:31:55.92:0,56,766	0/0:14,0:14:36.07:0,36,656	0/0:15,0:15:45.14:0,45,899	0/0:16,0:16:45.15:0,45,927	0/0:5,0:5:11.97:0,12,96
chr10	69056736	.	C	CGT	2040.47	PASS	AB=0.795;AC=15;AF=0.268;AN=56;BaseQRankSum=-0.790;DP=540;FS=1.750;HRun=0;HaplotypeScore=96.0253;InbreedingCoeff=0.2409;MQ=59.97;MQ0=9;MQRankSum=-3.551;QD=9.11;ReadPosRankSum=0.227;VQSLOD=2.9044;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:18,24:44:48.46:488,0,48	0/0:11,0:11:11.86:0,12,117	0/0:19,0:11:1.85:0,2,22	0/1:21,0:13:0.82:1,0,29	0/1:6,4:11:10.32:142,0,10	0/1:7,6:14:52.33:121,0,52	0/0:28,0:30:50.43:0,50,478	0/0:19,0:18:3.01:0,3,34	0/0:16,0:16:27.01:0,27,292	1/1:20,0:20:35.39:321,35,0	1/1:15,0:15:1.42:5,1,0	0/0:13,0:16:29.33:0,29,266	0/0:22,0:24:29.41:0,29,253	0/0:16,0:16:29.65:0,30,300	0/0:12,0:14:23.65:0,24,199	1/1:7,9:15:24.08:371,24,0	0/0:24,0:26:32.75:0,33,337	0/1:20,0:20:9.19:49,0,9	0/0:17,0:15:20.90:0,21,224	0/0:8,0:8:9.02:0,9,103	0/0:39,0:41:65.79:0,66,688	0/0:18,0:19:4.95:0,5,263	1/1:12,1:13:5.85:69,6,0	0/1:8,22:32:75.44:604,0,75	0/1:14,0:15:28.30:28,0,153	0/0:14,0:15:23.90:0,24,254	0/0:16,0:17:35.92:0,36,379	0/0:5,0:5:1.27:0,1,17
chr10	69057167	.	GGT	G	319.71	PASS	AB=0.913;AC=13;AF=0.283;AN=46;BaseQRankSum=2.976;DP=627;FS=1.047;HRun=0;HaplotypeScore=83.3769;InbreedingCoeff=-0.3106;MQ=71.07;MQ0=8;MQRankSum=-0.550;QD=1.13;ReadPosRankSum=2.985;VQSLOD=1.5067;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:40,0:40:66.02:102,0,66	0/0:9,0:9:9:0,9,93	./.	./.	0/0:16,0:16:2.99:0,3,24	0/1:14,2:16:23.03:23,0,77	0/1:28,1:29:34.50:35,0,44	0/0:17,0:17:2.97:0,3,20	0/1:24,0:25:2.10:2,0,91	0/0:20,0:23:32.20:0,32,244	./.	0/1:16,2:20:31.54:66,0,32	0/1:12,1:13:23.04:23,0,79	./.	0/0:13,0:13:3.01:0,3,44	0/0:22,0:22:9.01:0,9,112	0/1:34,2:40:61.82:62,0,193	0/0:21,0:23:12.87:0,13,245	0/0:19,0:18:3.01:0,3,43	./.	0/0:41,0:39:6.01:0,6,67	0/1:24,1:25:20.03:20,0,111	0/0:21,0:21:12.01:0,12,132	0/1:23,1:34:17.08:17,0,101	0/1:15,2:17:46.09:46,0,103	0/0:29,0:29:9.02:0,9,112	0/1:9,3:11:23.19:23,0,59	1/1:10,1:11:3.01:32,3,0
chr10	69057282	.	C	CAACAAGAATGATAGGG	35154.05	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-0.102;DP=623;FS=30.595;HRun=0;HaplotypeScore=252.4703;InbreedingCoeff=0.9964;MQ=88.41;MQ0=0;MQRankSum=-18.599;QD=168.20;ReadPosRankSum=-2.607;VQSLOD=3.4405;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:18,12:31:78.22:5255,78,0	0/0:9,0:9:27.09:0,27,1216	0/0:29,0:29:81.25:0,81,3018	0/0:34,0:34:90.20:0,90,3437	1/1:13,19:32:90.31:5874,90,0	0/0:20,0:20:60.19:0,60,2683	0/0:29,0:29:78.27:0,78,3322	1/1:37,0:37:99:5959,99,0	0/0:22,0:22:63.22:0,63,2649	1/1:24,11:37:99:6370,102,0	1/1:8,9:19:51.09:3249,51,0	0/0:19,0:20:54.19:0,54,2331	0/0:11,0:11:33.11:0,33,1539	0/0:18,0:18:48.14:0,48,1994	0/0:15,0:15:42.14:0,42,1729	0/0:18,0:18:54.19:0,54,2503	0/0:29,0:29:84.22:0,84,3456	1/1:4,1:5:15.05:871,15,0	0/0:16,0:15:42.13:0,42,1629	0/0:20,0:20:60.21:0,60,2514	0/0:27,0:27:81.28:0,81,3507	0/0:24,0:24:72.25:0,72,3100	1/1:14,14:29:78.27:5501,78,0	1/1:11,4:19:32.85:2074,33,0	0/0:19,0:19:54.19:0,54,2366	0/0:24,0:24:69.24:0,69,3031	0/0:23,0:22:66.23:0,66,2712	0/0:7,0:7:21.07:0,21,979
chr10	69057434	.	C	CACATAACAGTGAGGA	406.02	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-1.368;DP=671;FS=0.000;HRun=0;HaplotypeScore=261.6727;InbreedingCoeff=0.9306;MQ=87.15;MQ0=0;MQRankSum=-2.941;QD=40.60;ReadPosRankSum=0.327;VQSLOD=2.3264;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,114,4332	0/0:11,0:11:30.09:0,30,1144	0/0:27,0:27:69.23:0,69,2032	0/0:22,0:21:54.09:0,54,1596	0/0:27,0:27:78.25:0,78,3039	0/0:24,0:24:69.20:0,69,2594	0/0:30,0:30:87.27:0,87,3212	0/0:33,0:33:93.23:0,93,3309	0/0:30,0:30:87.30:0,87,3647	0/0:29,0:29:87.30:0,87,3663	0/0:16,0:16:48.16:0,48,1599	0/0:15,0:15:39.13:0,39,1616	0/0:17,0:17:51.17:0,51,1988	0/0:26,0:26:75.26:0,75,2966	0/0:23,0:23:69.24:0,69,2766	0/0:22,0:22:66.21:0,66,2795	0/0:29,0:29:78.20:0,78,2774	1/1:3,4:10:9.03:489,9,0	0/0:25,0:25:75.22:0,75,2582	0/0:19,0:19:54.19:0,54,2240	0/0:33,0:33:96.33:0,96,3749	0/0:26,0:26:75.20:0,75,2952	0/0:26,0:26:69.22:0,69,2756	0/0:29,0:29:87.30:0,87,3436	0/0:21,0:21:48.15:0,48,2002	0/0:32,0:32:90.28:0,90,3356	0/0:19,0:19:57.20:0,57,2491	0/0:6,0:6:18.06:0,18,821
chr10	69057913	.	C	CT	387.69	PASS	AB=0.910;AC=7;AF=0.125;AN=56;BaseQRankSum=-0.296;DP=424;FS=10.220;HRun=13;HaplotypeScore=50.5303;InbreedingCoeff=0.3141;MQ=62.91;MQ0=1;MQRankSum=2.516;QD=4.12;ReadPosRankSum=-1.385;VQSLOD=-0.1618;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:11,9:21:58.37:74,0,58	0/0:12,0:12:4.62:0,5,123	0/0:13,0:6:2.93:0,3,20	0/1:10,0:8:3.23:6,0,3	1/1:5,18:23:47.88:414,48,0	0/0:19,0:19:34.75:0,35,220	0/0:14,0:14:23.65:0,24,156	0/0:23,0:24:35.40:0,35,236	0/0:14,1:16:3.83:0,4,157	0/0:16,0:16:35.61:0,36,244	0/0:18,0:19:28.63:0,29,185	0/0:12,0:12:17.81:0,18,122	0/0:10,0:10:17.78:0,18,122	0/0:8,0:9:6.03:0,6,60	0/0:15,0:15:29.67:0,30,203	0/0:8,0:8:8.90:0,9,62	0/0:25,0:25:50.08:0,50,334	0/1:10,0:10:0:0,0,0	0/0:26,0:26:24.61:0,25,250	0/1:13,1:14:1.18:1,0,136	0/0:18,1:19:26.46:0,26,172	0/0:8,0:9:7.92:0,8,47	0/0:8,0:8:17.73:0,18,118	0/0:12,0:12:20.68:0,21,141	0/0:8,0:8:14.85:0,15,103	0/0:16,0:17:29.65:0,30,202	0/1:15,1:16:4.13:4,0,116	0/0:19,0:19:41.55:0,42,287
chr10	69058372	.	A	ATAT	1616.95	PASS	AB=0.722;AC=32;AF=0.727;AN=44;BaseQRankSum=-2.352;DP=268;FS=0.000;HRun=0;HaplotypeScore=35.4717;InbreedingCoeff=0.2250;MQ=78.85;MQ0=5;MQRankSum=0.214;QD=10.04;ReadPosRankSum=-2.484;VQSLOD=1.9908;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:20:15.94:213,16,0	0/0:7,0:7:9.03:0,9,117	./.	./.	./.	1/1:8,2:10:4.78:61,5,0	1/1:4,0:4:3.01:44,3,0	0/0:25,0:25:0:0,0,0	1/1:11,0:11:3.01:57,3,0	./.	1/1:7,0:7:3.01:39,3,0	1/1:5,2:7:3.01:57,3,0	1/1:6,2:8:6.02:114,6,0	1/1:6,3:9:6.02:114,6,0	0/0:4,0:4:0:0,0,0	0/0:4,0:5:2.98:0,3,21	0/1:11,10:22:11.86:429,0,12	0/0:8,0:14:2.98:0,3,21	1/1:12,0:12:3.01:57,3,0	1/1:6,2:8:6.02:114,6,0	1/1:2,1:3:3.01:57,3,0	./.	./.	1/1:6,0:9:0.47:1,0,0	0/1:5,2:7:32.95:51,0,33	1/1:7,0:7:3.01:42,3,0	1/1:5,3:8:3.01:57,3,0	1/1:5,4:9:12.04:228,12,0
chr10	69061221	.	CCTTT	C	2060.28	PASS	AB=1.000;AC=7;AF=0.130;AN=54;BaseQRankSum=7.791;DP=454;FS=10.243;HRun=0;HaplotypeScore=90.3527;InbreedingCoeff=0.8035;MQ=54.32;MQ0=10;MQRankSum=5.625;QD=19.81;ReadPosRankSum=-1.131;VQSLOD=2.4866;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:32,0:32:33.60:1046,34,0	0/0:7,0:7:20.26:0,20,315	0/0:16,0:5:11.68:0,12,94	./.	1/1:4,37:40:98.31:1092,98,0	0/0:16,0:16:42.14:0,42,765	0/0:10,0:9:24.03:0,24,324	1/1:17,0:16:4.86:52,5,0	0/0:18,0:18:45.14:0,45,721	0/0:20,0:20:48.14:0,48,780	0/0:17,0:16:36.49:0,36,533	0/0:8,0:8:18.06:0,18,358	0/0:15,0:15:39.10:0,39,644	0/0:13,0:13:36.11:0,36,639	0/0:15,0:15:31.83:0,32,451	0/0:14,0:14:39.12:0,39,707	0/0:12,0:11:30.08:0,30,456	0/1:14,0:13:6.45:6,0,13	0/0:9,0:9:17.04:0,17,223	0/0:13,0:13:22.24:0,22,439	0/0:13,0:12:32.95:0,33,424	0/0:11,0:11:28.82:0,29,394	0/0:20,0:19:40.24:0,40,525	0/0:21,0:21:38.88:0,39,646	0/0:22,0:22:50.08:0,50,758	0/0:13,0:12:25.71:0,26,486	0/0:19,0:19:34.92:0,35,577	0/0:12,0:12:26.48:0,26,336
chr10	69061236	.	CTCTT	C	809.69	PASS	AB=0.967;AC=21;AF=0.420;AN=50;BaseQRankSum=-0.034;DP=448;FS=3.210;HRun=0;HaplotypeScore=98.0563;InbreedingCoeff=0.4697;MQ=54.15;MQ0=11;MQRankSum=0.559;QD=3.75;ReadPosRankSum=1.361;VQSLOD=1.8028;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:31,0:31:33.26:53,0,33	0/1:8,1:9:20.87:21,0,407	./.	./.	0/1:43,0:42:7.50:7,0,270	0/0:17,0:17:9.02:0,9,148	0/0:11,0:9:3.01:0,3,52	./.	1/1:14,0:14:3.01:44,3,0	0/0:14,0:22:25.04:0,25,281	0/0:21,0:20:12.33:0,12,121	0/0:7,0:7:9.03:0,9,189	0/0:15,0:15:5.99:0,6,73	0/0:17,0:17:21.07:0,21,390	1/1:9,4:13:6.02:90,6,0	0/0:14,0:14:18.06:0,18,393	0/0:14,0:13:3.48:0,3,53	0/0:13,0:12:2.96:0,3,19	1/1:6,0:6:3:28,3,0	1/1:8,5:13:15.04:201,15,0	0/0:11,0:10:2.96:0,3,24	1/1:8,5:13:5.30:89,5,0	0/0:16,0:15:12.12:0,12,139	0/0:27,0:27:15.93:0,16,134	1/1:14,0:25:5.80:41,6,0	1/1:10,3:12:9.03:134,9,0	1/1:13,10:23:12.04:180,12,0	1/1:10,0:11:5.52:89,6,0
chr10	69062173	.	GAAATCTAA	G	1734.95	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.777;DP=617;FS=1.723;HRun=0;HaplotypeScore=148.9136;InbreedingCoeff=0.9662;MQ=90.66;MQ0=0;MQRankSum=-8.024;QD=38.55;ReadPosRankSum=1.170;VQSLOD=3.7065;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,120,5047	0/0:4,0:4:9.03:0,9,393	0/0:32,0:32:81.25:0,81,2926	0/0:19,0:19:48.16:0,48,1832	0/0:25,0:25:72.25:0,72,2943	0/0:22,0:22:63.22:0,63,2515	0/0:26,0:26:72.23:0,72,2866	0/0:27,0:27:78.27:0,78,3282	0/0:19,0:19:54.19:0,54,2350	0/0:27,0:27:78.27:0,78,3222	0/0:19,0:19:57.20:0,57,2368	0/0:7,0:7:18.06:0,18,774	0/0:16,0:16:48.16:0,48,2046	0/0:19,0:19:48.16:0,48,2072	0/0:24,0:24:69.24:0,69,2878	0/0:16,0:16:48.16:0,48,1970	0/0:25,0:25:69.24:0,69,2855	0/0:18,0:18:51.18:0,51,2146	0/0:27,0:27:72.25:0,72,2933	0/0:29,0:29:84.76:0,85,3433	0/0:23,0:23:69.20:0,69,2752	0/0:14,0:14:42.14:0,42,1649	1/1:1,19:20:42.14:1113,42,0	1/1:5,20:25:26.05:743,26,0	0/0:15,0:15:42.13:0,42,1613	0/0:28,0:28:78.26:0,78,3226	0/0:24,0:24:63.22:0,63,2729	0/0:25,0:25:75.26:0,75,3150
chr10	69062880	.	TC	T	779.28	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.950;DP=514;FS=0.769;HRun=3;HaplotypeScore=50.1077;InbreedingCoeff=0.9684;MQ=87.13;MQ0=0;MQRankSum=-2.374;QD=29.97;ReadPosRankSum=-3.561;VQSLOD=1.9394;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,117,1664	0/0:8,0:8:24.08:0,24,346	0/0:23,0:23:69.17:0,69,904	0/0:16,0:16:14.95:0,15,517	0/0:20,0:20:57.18:0,57,798	0/0:28,0:28:84.27:0,84,1192	0/0:15,0:15:45.15:0,45,646	1/1:1,25:25:72.18:874,72,0	0/0:12,0:12:36.12:0,36,514	0/0:15,0:15:45.15:0,45,646	0/0:21,0:21:57.18:0,57,802	0/0:6,0:6:18.06:0,18,259	0/0:14,0:14:36.09:0,36,481	0/0:13,0:13:39.13:0,39,562	0/0:13,0:13:39.13:0,39,562	0/0:20,0:20:57.18:0,57,804	0/0:20,0:20:57.19:0,57,821	0/0:8,0:8:21.05:0,21,278	0/0:18,0:18:54.17:0,54,746	0/0:27,0:27:78.25:0,78,1101	0/0:24,0:24:66.19:0,66,913	0/0:20,0:20:57.19:0,57,820	0/0:16,0:16:45.15:0,45,647	0/0:19,0:19:51.17:0,51,734	0/0:16,0:16:48.14:0,48,658	0/0:22,0:22:63.21:0,63,904	0/0:25,0:25:66.19:0,66,912	0/0:8,0:8:24.06:0,24,325
chr10	69063604	.	TTG	T	407.14	PASS	AB=0.938;AC=15;AF=0.288;AN=52;BaseQRankSum=6.437;DP=772;FS=0.546;HRun=0;HaplotypeScore=134.7418;InbreedingCoeff=-0.1295;MQ=58.64;MQ0=6;MQRankSum=-3.308;QD=1.07;ReadPosRankSum=2.459;VQSLOD=2.3690;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:33,0:31:11.91:12,0,40	0/0:6,0:6:6.02:0,6,83	./.	./.	0/1:23,0:23:12.28:26,0,12	0/0:34,0:34:16.75:0,17,538	0/0:25,2:25:6.63:0,7,477	0/0:24,0:24:12.26:0,12,67	0/1:31,0:32:7.67:8,0,498	0/1:28,0:26:39.52:40,0,56	0/1:24,0:24:24.44:24,0,68	0/0:33,1:33:23.41:0,23,699	0/0:28,1:29:8.67:0,9,549	0/0:31,1:32:7.43:0,7,570	0/0:29,0:29:30.07:0,30,417	0/0:34,2:36:1.84:0,2,728	0/1:28,6:34:39.94:40,0,586	0/0:13,0:13:2.38:0,2,77	0/1:24,0:20:12.81:13,0,126	0/1:15,4:19:63.34:63,0,170	0/1:74,0:73:13.69:14,0,843	0/0:24,1:25:39.11:0,39,571	1/1:16,0:17:4.73:49,5,0	1/1:28,0:28:11.16:148,11,0	0/1:24,7:31:79.40:79,0,580	0/0:27,0:26:25.13:0,25,446	0/0:21,0:21:14.84:0,15,454	0/1:10,2:12:42.72:43,0,160
chr10	69063642	.	T	TTG	697.73	PASS	AB=0.949;AC=9;AF=0.167;AN=54;BaseQRankSum=9.579;DP=829;FS=1.077;HRun=0;HaplotypeScore=181.0530;InbreedingCoeff=0.1014;MQ=46.89;MQ0=34;MQRankSum=-8.414;QD=2.77;ReadPosRankSum=-1.349;VQSLOD=1.9772;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:25,9:31:49.20:128,0,49	0/0:8,0:8:18.05:0,18,217	./.	0/0:31,0:1:2.37:0,2,8	0/1:28,4:29:28.43:69,0,28	0/0:29,0:29:70.37:0,70,821	0/0:32,0:31:77.38:0,77,893	0/1:38,0:35:99:143,0,481	0/0:34,0:34:69.76:0,70,895	0/1:45,0:42:99:122,0,722	0/1:29,0:27:96.31:96,0,261	0/0:34,0:31:66.07:0,66,939	0/0:26,0:26:56.07:0,56,698	0/0:34,0:34:77.12:0,77,961	0/0:26,0:26:66.13:0,66,844	0/0:39,0:39:88.17:0,88,1118	0/0:35,0:34:44.73:0,45,858	0/1:10,0:10:5.74:73,0,6	0/0:19,0:14:17.61:0,18,340	0/0:24,0:24:61.42:0,61,750	0/0:71,0:68:99:0,142,1710	0/0:28,0:27:57.58:0,58,671	0/1:31,0:27:21.08:31,0,21	1/1:31,0:29:16.07:179,16,0	0/0:32,0:32:66.13:0,66,791	0/0:24,0:22:55.88:0,56,636	0/0:20,0:19:25.07:0,25,420	0/0:14,0:13:35.76:0,36,428
chr10	69063648	.	GTA	G	338.16	PASS	AB=0.888;AC=7;AF=0.125;AN=56;BaseQRankSum=10.076;DP=816;FS=14.435;HRun=0;HaplotypeScore=163.3563;InbreedingCoeff=-0.0707;MQ=47.12;MQ0=34;MQRankSum=-7.718;QD=1.87;ReadPosRankSum=-1.046;VQSLOD=1.8694;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:30,3:30:86.80:108,0,87	0/0:8,0:8:21.07:0,21,363	0/0:19,0:1:2.99:0,3,23	0/0:30,0:1:0.47:0,0,1	0/1:17,15:29:47.02:110,0,47	0/0:28,0:28:55.77:0,56,1252	0/0:34,0:33:85.96:0,86,1371	0/0:35,0:32:36.92:0,37,631	0/0:34,0:34:31.86:0,32,1215	0/0:48,0:44:1.07:0,1,1344	0/1:27,0:25:93.98:94,0,539	0/0:35,0:32:82.04:0,82,1326	0/0:23,0:23:40.26:0,40,1040	0/0:34,0:34:67.61:0,68,1332	0/0:25,0:25:69.04:0,69,1213	0/0:35,0:35:87.89:0,88,1504	0/0:35,0:34:59.95:0,60,1166	0/1:10,1:11:42.31:42,0,54	0/0:20,0:16:1.89:0,2,502	0/0:24,0:24:64.12:0,64,1087	0/0:67,1:65:99:0,160,2712	0/0:28,0:27:61.45:0,61,1074	0/1:29,3:28:45.10:74,0,45	0/1:23,7:28:7.52:31,0,8	0/0:31,0:31:81.08:0,81,1180	0/0:23,0:22:57.55:0,58,963	0/0:18,0:17:50.06:0,50,749	0/1:15,0:14:1.13:1,0,598
chr10	69063656	.	TTG	T	329.69	PASS	AB=0.847;AC=7;AF=0.125;AN=56;BaseQRankSum=8.060;DP=850;FS=4.203;HRun=0;HaplotypeScore=172.3766;InbreedingCoeff=-0.1571;MQ=46.60;MQ0=35;MQRankSum=-8.424;QD=1.46;ReadPosRankSum=0.138;VQSLOD=2.6562;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:24,11:32:67.21:67,0,182	0/0:9,0:9:24.05:0,24,373	0/0:24,1:1:3.01:0,3,50	0/0:35,1:1:3.01:0,3,43	0/1:32,2:30:96.46:96,0,143	0/0:30,0:30:78.25:0,78,1256	0/0:33,0:32:69.24:0,69,1138	0/0:42,0:39:42.05:0,42,535	0/0:31,0:31:78.04:0,78,1242	0/1:46,8:50:92.03:92,0,1475	0/1:17,10:25:99:123,0,517	0/0:36,1:34:90.70:0,91,1357	0/0:24,0:24:60.06:0,60,892	0/0:36,0:36:85.97:0,86,1288	0/0:25,0:25:75.17:0,75,1197	0/0:31,0:31:74.66:0,75,1142	0/0:35,0:34:53.54:0,54,1144	0/1:11,1:12:11.36:11,0,163	0/0:23,0:18:44.53:0,45,660	0/0:25,0:25:63.22:0,63,1049	0/0:65,1:63:99:0,121,2442	0/0:29,0:28:60.18:0,60,951	0/1:25,9:30:36.73:37,0,193	0/1:27,3:28:31.52:32,0,51	0/0:27,0:27:61.45:0,61,1000	0/0:25,0:24:59.86:0,60,917	0/0:18,0:17:45.15:0,45,749	0/0:16,0:15:24.80:0,25,513
chr10	69063664	.	GTGTGTTTGTGTGTA	G	1457.59	PASS	AB=0.997;AC=8;AF=0.148;AN=54;BaseQRankSum=11.244;DP=882;FS=5.059;HRun=0;HaplotypeScore=328.8592;InbreedingCoeff=0.1365;MQ=46.29;MQ0=26;MQRankSum=-10.996;QD=5.88;ReadPosRankSum=-6.520;VQSLOD=-0.0402;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:37,0:35:40.26:331,0,40	0/0:9,0:9:24.08:0,24,642	0/0:40,0:2:6.02:0,6,112	./.	0/1:34,0:30:20.68:165,0,21	0/0:29,0:29:75.24:0,75,1779	0/0:32,0:31:72.16:0,72,1549	1/1:14,26:35:71.55:653,72,0	0/0:31,0:31:77.61:0,78,1650	0/1:57,0:55:99:107,0,2507	0/0:31,0:29:48.01:0,48,1062	0/0:41,0:39:81.23:0,81,1950	0/0:23,0:23:55.38:0,55,1401	0/0:32,0:32:64.33:0,64,1937	0/0:32,0:32:93.30:0,93,2312	0/0:30,0:30:63.03:0,63,1498	0/0:31,0:31:70.11:0,70,1898	0/1:13,0:13:0.66:1,0,34	0/0:21,0:18:39.01:0,39,821	0/0:25,0:25:66.20:0,66,1801	0/0:72,0:70:99:0,162,3856	0/0:28,0:27:55.36:0,55,1108	0/1:35,0:32:72.11:260,0,72	0/1:29,0:28:31.35:76,0,31	0/0:23,0:23:62.05:0,62,1655	0/0:26,0:25:33.25:0,33,1154	0/0:18,0:17:42.14:0,42,894	0/0:15,0:15:34.67:0,35,1216
chr10	69063670	.	T	TTG	1751.68	PASS	AB=0.906;AC=9;AF=0.167;AN=54;BaseQRankSum=12.248;DP=883;FS=2.033;HRun=0;HaplotypeScore=174.8929;InbreedingCoeff=-0.0418;MQ=46.44;MQ0=26;MQRankSum=-11.148;QD=6.26;ReadPosRankSum=-6.475;VQSLOD=1.7153;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:32,7:37:44.55:471,0,45	0/0:8,0:8:24.08:0,24,319	0/0:42,0:2:6.02:0,6,78	./.	0/1:24,13:33:24.01:199,0,24	0/0:31,0:30:81.24:0,81,1038	0/0:32,0:31:75.10:0,75,977	0/1:36,0:32:43.92:301,0,44	0/0:33,0:33:83.36:0,83,988	0/1:51,8:56:99:390,0,1131	0/1:28,1:27:35.83:36,0,541	0/0:38,0:36:90.11:0,90,1139	0/0:23,0:23:58.36:0,58,723	0/0:33,0:33:72.51:0,73,1117	0/0:33,0:33:99:0,99,1281	0/0:29,0:29:53.80:0,54,760	0/0:33,0:32:47.05:0,47,970	0/1:14,0:14:38.57:39,0,90	0/0:19,0:17:47.55:0,48,546	0/0:25,0:25:51.23:0,51,845	0/0:74,0:72:99:0,166,2123	0/0:26,0:24:57.13:0,57,707	1/1:20,15:33:0.92:369,1,0	0/1:26,3:27:33.50:82,0,33	0/0:24,0:24:66.17:0,66,850	0/0:25,0:24:36.25:0,36,726	0/0:16,0:16:42.14:0,42,557	0/0:13,0:13:35.33:0,35,446
chr10	69063690	.	GTGTA	G	1689.83	PASS	AB=0.806;AC=9;AF=0.161;AN=56;BaseQRankSum=9.904;DP=888;FS=0.000;HRun=0;HaplotypeScore=188.6065;InbreedingCoeff=-0.1912;MQ=50.16;MQ0=27;MQRankSum=-6.816;QD=5.14;ReadPosRankSum=-1.512;VQSLOD=2.4411;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:16,18:31:75.74:285,0,76	0/0:11,0:11:33.10:0,33,743	0/1:47,0:9:14.92:15,0,309	0/0:36,0:8:18.06:0,18,383	0/1:21,15:32:51.81:52,0,76	0/0:28,0:27:69.22:0,69,1692	0/0:31,0:30:82.14:0,82,1890	0/1:39,2:37:99:154,0,529	0/0:32,0:32:80.12:0,80,2110	0/1:35,30:62:99:1024,0,2153	0/1:21,6:25:99:100,0,660	0/0:41,0:40:99:0,104,2413	0/0:24,0:24:66.21:0,66,1607	0/0:31,0:31:89.62:0,90,2264	0/0:36,0:36:99:0,106,2680	0/0:25,0:25:55.14:0,55,1398	0/0:35,0:35:61.33:0,61,1829	0/1:16,0:16:35.64:36,0,71	0/0:22,0:19:53.55:0,54,1051	0/0:28,0:27:78.24:0,78,1973	0/0:71,0:69:99:0,172,4124	0/0:23,0:21:54.18:0,54,1369	0/1:18,20:36:99:104,0,269	0/1:18,7:23:60.44:60,0,92	0/0:31,0:31:89.88:0,90,2149	0/0:25,0:24:72.22:0,72,1696	0/0:14,0:14:36.10:0,36,866	0/0:15,0:15:24.14:0,24,862
chr10	69063712	.	A	ATGTGTGTGTGTATG	4150.95	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=12.536;DP=854;FS=8.638;HRun=0;HaplotypeScore=327.6018;InbreedingCoeff=0.1023;MQ=55.12;MQ0=18;MQRankSum=-9.365;QD=15.72;ReadPosRankSum=1.280;VQSLOD=0.7580;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:37,0:35:4.56:479,0,5	0/0:13,0:13:33.11:0,33,1086	0/0:44,0:18:34.72:0,35,779	0/0:39,0:26:64.60:0,65,1167	0/1:28,0:24:59.68:63,0,60	0/0:24,0:23:51.25:0,51,1909	0/0:31,0:30:17.83:0,18,1929	0/1:38,0:36:99:141,0,148	0/0:29,0:29:75.26:0,75,2732	0/1:59,0:57:99:2654,0,111	0/1:20,0:19:22.46:345,0,22	0/0:30,0:30:75.26:0,75,2729	0/0:25,0:25:66.21:0,66,2179	0/0:32,0:32:87.28:0,87,3036	0/0:37,0:37:93.32:0,93,3303	0/0:22,0:22:60.20:0,60,1716	0/0:31,0:31:72.22:0,72,2173	1/1:4,10:18:8.63:189,9,0	0/0:21,0:20:39.13:0,39,1261	0/0:27,0:26:69.19:0,69,2272	0/0:68,0:67:99:0,150,4426	0/0:28,0:27:69.22:0,69,2152	0/1:31,0:29:69.37:140,0,69	0/1:33,0:31:99:141,0,161	0/0:29,0:29:72.22:0,72,2573	0/0:34,0:33:75.22:0,75,2175	0/0:15,0:15:45.14:0,45,1459	0/0:10,0:10:18.06:0,18,690
chr10	69064533	.	T	TACACACAC	2304.41	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=5.310;DP=598;FS=0.000;HRun=0;HaplotypeScore=162.3161;InbreedingCoeff=0.7610;MQ=55.63;MQ0=11;MQRankSum=-5.213;QD=25.89;ReadPosRankSum=-3.019;VQSLOD=2.8651;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:44.87:0,45,1013	0/0:15,0:15:32.81:0,33,810	0/0:32,0:14:30.10:0,30,730	0/0:50,0:25:34.64:0,35,1471	0/0:19,0:18:39.01:0,39,1005	0/0:25,0:25:72.23:0,72,1817	0/0:22,0:22:53.52:0,54,1247	1/1:28,0:28:69.24:1696,69,0	0/0:22,0:22:38.96:0,39,674	0/0:26,0:26:72.07:0,72,1663	0/0:14,0:14:27.07:0,27,650	0/0:8,0:8:21.07:0,21,505	0/0:15,0:14:36.12:0,36,962	0/0:17,0:17:36.58:0,37,829	0/0:26,0:26:65.59:0,66,1658	0/0:17,0:17:45.15:0,45,1230	0/0:25,0:25:58.27:0,58,1526	0/1:11,0:9:46.73:47,0,118	0/0:27,0:27:69.20:0,69,1751	0/0:14,0:13:21.04:0,21,578	0/0:19,0:18:17.47:0,17,1085	0/0:23,0:23:60.18:0,60,1319	1/1:20,0:20:34.38:602,34,0	1/1:12,16:30:3.97:99,4,0	0/0:10,0:10:24.08:0,24,634	0/0:29,0:29:81.26:0,81,2042	0/0:23,0:23:54.18:0,54,1341	0/0:3,0:3:9.01:0,9,188
chr10	69064537	.	CAG	C	312.91	PASS	AB=0.919;AC=17;AF=0.327;AN=52;BaseQRankSum=3.366;DP=619;FS=6.788;HRun=0;HaplotypeScore=101.3084;InbreedingCoeff=0.0747;MQ=53.44;MQ0=12;MQRankSum=0.740;QD=1.13;ReadPosRankSum=1.624;VQSLOD=1.1897;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:8.21:0,8,66	0/0:14,0:14:8.99:0,9,90	./.	./.	0/0:21,0:20:3.07:0,3,11	0/1:24,0:25:29.38:29,0,167	0/1:23,0:24:27.50:28,0,157	0/0:31,0:31:20.25:0,20,112	0/1:6,1:23:8.10:8,0,159	0/0:32,0:32:17.88:0,18,153	0/0:14,0:14:5.22:0,5,32	1/1:6,0:8:9.01:83,9,0	0/1:16,0:15:9.56:10,0,95	1/1:14,0:18:6.15:29,6,0	0/1:23,3:27:5.10:5,0,239	0/0:18,0:18:12.01:0,12,138	0/0:21,1:22:0.85:0,1,335	0/0:12,0:10:5.95:0,6,42	0/1:24,1:25:24.47:24,0,221	0/0:13,0:11:8.76:0,9,101	0/0:20,0:19:11.98:0,12,132	1/1:22,0:27:11.90:62,12,0	0/1:16,1:20:25.55:26,0,87	1/1:23,4:28:3.17:15,3,0	0/1:11,0:11:12.97:26,0,13	0/0:30,0:30:3.91:0,4,358	0/1:15,7:24:3.40:121,0,3	0/0:5,0:5:6.88:0,7,68
chr10	69064584	.	A	AG	323.93	PASS	AB=0.600;AC=3;AF=0.054;AN=56;BaseQRankSum=4.889;DP=660;FS=3.490;HRun=1;HaplotypeScore=93.1369;InbreedingCoeff=0.5293;MQ=65.58;MQ0=15;MQRankSum=-1.221;QD=8.75;ReadPosRankSum=-0.360;VQSLOD=0.8682;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:77.72:0,78,920	0/0:10,0:10:20.99:0,21,270	0/0:29,0:13:24.53:0,25,280	0/0:43,0:22:48.08:0,48,545	0/0:32,0:32:71.77:0,72,890	0/0:25,0:25:47.60:0,48,749	0/0:27,0:27:71.78:0,72,874	0/0:36,0:35:99:0,104,1089	0/0:35,0:35:68.01:0,68,734	0/1:6,12:13:14.58:361,0,15	1/1:9,9:9:6:58,6,0	0/0:8,0:9:8.38:0,8,202	0/0:16,0:16:48.15:0,48,604	0/0:14,0:14:33.43:0,33,367	0/0:21,0:21:43.41:0,43,482	0/0:19,0:19:49.01:0,49,589	0/0:34,0:34:78.13:0,78,948	0/0:17,0:15:39.09:0,39,467	0/0:30,0:28:78.13:0,78,922	0/0:25,0:25:62.99:0,63,762	0/0:21,0:20:54.14:0,54,660	0/0:23,0:23:49.24:0,49,534	0/0:16,0:16:21.29:0,21,318	0/0:25,0:25:20.88:0,21,224	0/0:14,0:14:36.06:0,36,439	0/0:26,1:27:29.13:0,29,787	0/0:32,0:32:77.77:0,78,871	0/0:6,0:6:18.06:0,18,230
chr10	69065218	.	CT	C	364.85	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=3.678;DP=310;FS=0.000;HRun=1;HaplotypeScore=43.3040;InbreedingCoeff=0.2437;MQ=52.85;MQ0=28;MQRankSum=-1.484;QD=3.51;ReadPosRankSum=-0.169;VQSLOD=-0.2680;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:37,0:33:53.99:382,54,0	0/0:3,0:3:2.92:0,3,24	0/0:18,0:6:6.37:0,6,42	0/0:16,0:6:4.53:0,5,55	1/1:16,0:16:5.83:44,6,0	0/0:3,2:3:2.74:0,3,24	0/0:15,0:13:3.46:0,3,63	0/0:18,0:18:2.23:0,2,35	0/0:11,0:11:8.67:0,9,73	1/1:9,1:8:1.81:15,2,0	1/1:3,0:2:0.47:1,0,0	0/1:10,0:9:7.54:17,0,8	0/0:7,0:7:5.55:0,6,47	0/0:5,1:6:8.91:0,9,73	0/1:12,0:11:16.23:16,0,136	0/1:5,0:5:0:0,0,0	0/0:17,0:16:2.47:0,2,170	0/1:8,0:6:18.23:18,0,18	0/0:8,0:8:17.39:0,17,122	0/0:5,0:5:2.22:0,2,10	0/0:19,0:15:23.18:0,23,173	0/0:16,0:15:27.31:0,27,125	0/0:5,0:3:2.82:0,3,24	0/0:13,0:11:8.09:0,8,68	0/0:2,1:3:2.92:0,3,21	0/0:7,0:7:2.36:0,2,23	0/0:14,0:13:11.78:0,12,100	0/1:3,0:1:0:0,0,0
chr10	69065223	.	C	CA	792.34	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=-4.022;DP=327;FS=8.478;HRun=0;HaplotypeScore=48.5610;InbreedingCoeff=0.5302;MQ=59.47;MQ0=20;MQRankSum=3.596;QD=11.48;ReadPosRankSum=2.950;VQSLOD=3.3497;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,31:30:54.01:718,54,0	0/0:2,0:2:5.98:0,6,62	0/1:19,0:7:9.19:9,0,61	0/0:20,0:10:10.04:0,10,222	1/1:4,12:16:23.66:190,24,0	0/0:7,0:5:5.38:0,5,50	0/0:15,0:13:20.26:0,20,177	0/0:15,0:15:30.17:0,30,249	0/0:13,0:13:17.96:0,18,190	0/0:12,0:12:13.25:0,13,111	0/0:4,0:3:5.03:0,5,32	0/0:10,0:9:9.89:0,10,83	0/0:9,0:9:15.39:0,15,129	0/0:5,0:5:11.99:0,12,144	0/0:14,0:13:32.93:0,33,372	0/0:7,0:7:11.77:0,12,74	0/0:16,0:15:32.98:0,33,393	0/0:6,0:5:8.98:0,9,86	0/0:8,0:8:23.91:0,24,267	0/0:8,0:8:12.42:0,12,96	0/0:15,0:14:27.50:0,27,323	0/0:19,0:18:38.97:0,39,352	0/0:6,0:5:11.96:0,12,110	0/0:15,0:13:9.91:0,10,125	0/0:4,0:4:6.90:0,7,71	0/0:12,0:12:20.72:0,21,158	0/0:14,0:13:20.97:0,21,204	0/0:2,0:1:2.98:0,3,21
chr10	69066348	.	TAC	T	205.11	PASS	AB=0.899;AC=9;AF=0.161;AN=56;BaseQRankSum=2.312;DP=839;FS=2.388;HRun=0;HaplotypeScore=126.9819;InbreedingCoeff=-0.2298;MQ=52.01;MQ0=23;MQRankSum=-0.862;QD=0.82;ReadPosRankSum=1.630;VQSLOD=2.5355;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:6.48:0,6,48	0/0:11,0:11:0.35:0,0,237	0/0:71,0:19:3.01:0,3,46	0/0:80,0:23:5.99:0,6,67	0/0:27,0:25:7.94:0,8,69	0/1:19,2:23:42.91:43,0,373	0/1:23,1:24:50.18:50,0,586	0/0:21,0:21:20.30:0,20,141	0/0:25,0:27:51.15:0,51,740	0/0:13,1:39:47.25:0,47,842	0/1:13,0:22:9.50:10,0,212	0/0:24,1:25:10.75:0,11,583	0/0:26,5:31:14.11:0,14,614	0/0:20,0:20:4.93:0,5,469	0/0:18,2:20:8.19:0,8,520	0/1:18,2:20:3.86:4,0,333	0/1:40,9:50:93.55:94,0,910	0/0:8,0:24:26.97:0,27,239	0/1:18,1:18:9.86:10,0,273	0/0:29,2:31:17.16:0,17,589	0/1:53,5:58:71.62:72,0,753	0/0:27,0:27:39.11:0,39,568	0/0:6,0:17:8.64:0,9,59	0/0:24,0:44:8.43:0,8,65	0/0:19,3:22:7.95:0,8,541	0/1:20,1:21:3.89:4,0,278	0/0:19,0:20:45.14:0,45,668	0/1:7,4:11:46.77:47,0,209
chr10	69067901	.	GGT	G	881.79	PASS	AB=0.879;AC=17;AF=0.315;AN=54;BaseQRankSum=4.677;DP=601;FS=0.000;HRun=0;HaplotypeScore=76.3592;InbreedingCoeff=-0.2352;MQ=62.90;MQ0=11;MQRankSum=1.981;QD=2.52;ReadPosRankSum=0.987;VQSLOD=1.7117;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:24,19:46:35.29:342,35,0	0/1:6,3:9:18.36:18,0,136	./.	0/0:32,0:12:0:0,0,0	0/1:12,9:21:12.55:240,0,13	0/0:14,0:14:20.92:0,21,234	0/1:24,4:28:33.70:34,0,338	0/0:28,0:27:29.74:0,30,221	0/0:16,0:18:15.95:0,16,365	0/1:23,0:23:12.33:12,0,209	0/0:15,1:15:21.03:0,21,274	0/1:17,5:22:99:125,0,334	0/1:12,1:13:12.33:12,0,243	0/0:8,0:8:12.04:0,12,180	0/1:16,1:15:9.34:9,0,271	0/1:15,2:17:39.69:40,0,274	0/1:37,3:40:43.06:43,0,845	0/0:7,0:15:15:0,15,131	0/1:16,2:18:51.70:52,0,107	0/0:21,0:21:27.07:0,27,382	0/1:27,4:32:44.78:45,0,353	0/1:20,0:22:5.43:5,0,284	0/0:22,0:22:42:0,42,423	0/0:23,0:23:42.07:0,42,435	0/1:13,3:16:0.34:0,0,341	0/0:30,0:30:22.57:0,23,520	0/1:16,2:19:33.68:34,0,356	0/1:6,1:5:24.36:24,0,80
chr10	69070769	.	A	ATGTG	142.81	PASS	AB=0.986;AC=12;AF=0.240;AN=50;BaseQRankSum=0.791;DP=579;FS=1.004;HRun=0;HaplotypeScore=103.8016;InbreedingCoeff=0.2004;MQ=53.07;MQ0=23;MQRankSum=-2.777;QD=0.69;ReadPosRankSum=-3.534;VQSLOD=1.3069;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	0/0:5,0:5:3.07:0,3,11	./.	./.	1/1:19,0:17:11.99:117,12,0	0/1:28,0:29:17.73:18,0,89	0/0:21,0:18:9.03:0,9,126	1/1:20,0:20:5.19:14,5,0	0/1:12,0:13:1.69:2,0,65	0/0:18,0:18:5.02:0,5,78	0/0:18,0:18:9.02:0,9,134	0/0:15,0:16:9.39:0,9,109	0/0:13,0:12:8.06:0,8,98	0/0:8,0:8:0.47:0,0,1	0/0:16,0:18:14.92:0,15,145	0/0:25,0:26:26.60:0,27,284	0/1:32,0:32:63.78:64,0,257	1/1:21,0:21:3.94:27,4,0	0/0:20,0:20:11.81:0,12,127	0/1:18,0:19:16.53:17,0,121	0/0:21,0:18:7.08:0,7,67	0/1:27,0:26:0.79:1,0,110	0/0:21,0:21:11.34:0,11,57	0/0:18,0:25:11.74:0,12,139	0/0:26,0:27:16.69:0,17,159	0/1:24,0:24:18.65:19,0,26	0/0:18,0:18:12.91:0,13,151	0/0:7,0:6:3:0,3,28
chr10	69072543	.	GT	G	1066.16	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.239;DP=512;FS=28.333;HRun=8;HaplotypeScore=47.6352;InbreedingCoeff=0.9958;MQ=78.38;MQ0=0;MQRankSum=-3.966;QD=23.18;ReadPosRankSum=1.088;VQSLOD=1.9073;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,21:23:60.09:579,60,0	0/0:9,0:9:27.08:0,27,326	0/0:11,0:11:24.07:0,24,290	0/0:13,0:13:36.11:0,36,422	1/1:1,22:23:63.10:608,63,0	0/0:12,0:12:30.09:0,30,362	0/0:9,0:9:27.05:0,27,311	0/0:38,0:38:99:0,99,1195	0/0:11,0:11:30.08:0,30,350	0/0:21,0:21:54.17:0,54,651	0/0:23,0:24:66.05:0,66,761	0/0:13,0:13:36.11:0,36,435	0/0:10,0:10:30.09:0,30,362	0/0:15,0:15:45.13:0,45,532	0/0:14,0:14:39.06:0,39,443	0/0:14,0:14:42.13:0,42,506	0/0:26,0:26:75.19:0,75,890	0/0:20,0:20:54.14:0,54,638	0/0:19,0:20:48.01:0,48,558	0/0:20,0:20:60.18:0,60,725	0/0:9,0:9:24.07:0,24,290	0/0:16,0:16:42.13:0,42,506	0/0:29,0:29:84.25:0,84,1004	0/0:13,0:13:39.12:0,39,471	0/0:27,0:27:78.24:0,78,940	0/0:31,0:31:87.26:0,87,1036	0/0:22,0:22:54.17:0,54,650	0/0:19,0:19:50.96:0,51,616
chr10	69075735	.	GGGGTGT	G	1026.68	PASS	AB=0.971;AC=4;AF=0.071;AN=56;BaseQRankSum=2.177;DP=719;FS=1.918;HRun=0;HaplotypeScore=169.7058;InbreedingCoeff=0.4613;MQ=75.01;MQ0=4;MQRankSum=2.398;QD=14.26;ReadPosRankSum=-2.250;VQSLOD=2.4911;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:80.48:0,80,1031	0/0:12,0:12:36.05:0,36,882	0/0:33,0:25:48.69:0,49,596	0/0:36,0:23:53.77:0,54,571	0/0:30,0:30:40.51:0,41,460	0/0:31,0:31:83.56:0,84,1910	0/0:24,0:24:63.15:0,63,1472	1/1:2,29:31:80.65:823,81,0	0/0:25,0:25:72.17:0,72,1755	0/1:25,0:25:99:190,0,584	0/1:15,0:16:99:129,0,410	0/0:27,0:27:78.08:0,78,1707	0/0:27,0:25:72.06:0,72,1205	0/0:23,0:23:57.64:0,58,1278	0/0:23,0:23:68.49:0,68,1665	0/0:11,0:11:33.07:0,33,814	0/0:22,0:22:65.65:0,66,1542	0/0:11,0:11:30:0,30,461	0/0:16,0:16:44.95:0,45,697	0/0:22,0:22:63.13:0,63,1388	0/0:64,0:64:99:0,174,3547	0/0:25,0:24:69.20:0,69,1882	0/0:21,0:21:42.03:0,42,1105	0/0:34,0:34:78.15:0,78,1747	0/0:23,0:23:69.13:0,69,1889	0/0:31,0:31:84.17:0,84,1918	0/0:27,0:27:81.13:0,81,1973	0/0:17,0:17:44.82:0,45,1023
chr10	69075737	.	GGT	G	230.23	PASS	AB=0.925;AC=15;AF=0.278;AN=54;BaseQRankSum=4.070;DP=774;FS=4.983;HRun=0;HaplotypeScore=126.1722;InbreedingCoeff=-0.2089;MQ=71.70;MQ0=8;MQRankSum=-0.493;QD=0.60;ReadPosRankSum=0.951;VQSLOD=2.0318;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:34:22.69:0,23,205	0/1:11,2:13:37:37,0,285	0/1:34,0:25:0:0,0,0	./.	0/0:18,0:37:9.98:0,10,84	0/0:28,1:30:6.39:0,6,592	0/0:22,2:25:2.52:0,3,396	1/1:30,0:30:9.16:41,9,0	0/1:24,5:29:16.23:16,0,523	0/1:27,0:25:4.47:4,0,307	0/1:16,0:16:11.99:12,0,206	0/1:24,3:28:21.96:22,0,482	0/1:26,1:25:12.48:12,0,224	0/0:20,0:23:15.98:0,16,390	0/0:23,1:24:0.43:0,0,469	0/1:9,1:10:12.46:12,0,252	0/0:21,1:22:5.58:0,6,491	0/0:14,0:14:14.77:0,15,120	0/1:16,3:19:42.33:42,0,103	0/0:24,1:25:2.50:0,3,375	0/1:64,4:69:56.28:56,0,987	0/0:29,0:29:39.01:0,39,642	0/0:12,0:25:36:0,36,345	0/0:24,0:41:50.97:0,51,454	0/0:24,0:24:28.98:0,29,708	0/1:29,1:30:11.79:12,0,483	0/1:26,3:29:70.01:70,0,635	0/1:17,4:21:37.02:37,0,298
chr10	69076133	.	CCT	C	211.41	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.066;DP=506;FS=3.991;HRun=0;HaplotypeScore=73.4650;InbreedingCoeff=0.9773;MQ=74.68;MQ0=0;MQRankSum=0.314;QD=16.26;ReadPosRankSum=1.588;VQSLOD=3.1208;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:59.99:0,60,383	0/0:13,0:13:38.93:0,39,423	0/0:17,0:12:23.07:0,23,265	0/0:17,0:14:27.29:0,27,268	0/0:19,0:19:38.34:0,38,295	0/0:16,0:16:47.95:0,48,657	0/0:15,0:15:45.02:0,45,668	0/0:24,0:24:64.74:0,65,672	0/0:17,0:17:46.80:0,47,572	0/0:29,0:29:76.03:0,76,514	0/0:16,0:16:43.98:0,44,290	0/0:18,0:18:50.96:0,51,724	0/0:21,0:21:60.09:0,60,800	0/0:12,0:12:35.95:0,36,487	0/0:16,0:16:42.01:0,42,604	0/0:21,0:20:57.17:0,57,881	0/0:13,0:13:39.09:0,39,574	1/1:2,11:13:23.81:305,24,0	0/0:18,0:16:41.93:0,42,527	0/0:20,0:20:60.10:0,60,774	0/0:6,0:6:15.02:0,15,202	0/0:19,0:19:48.02:0,48,650	0/0:20,0:20:44.92:0,45,639	0/0:20,0:20:54.14:0,54,827	0/0:18,0:18:39.08:0,39,581	0/0:26,0:26:72.08:0,72,1023	0/0:26,0:26:65.76:0,66,903	0/0:10,0:10:27:0,27,408
chr10	69076136	.	CT	C	1090.32	PASS	AB=0.934;AC=14;AF=0.250;AN=56;BaseQRankSum=4.756;DP=550;FS=2.072;HRun=13;HaplotypeScore=69.0954;InbreedingCoeff=0.4285;MQ=73.30;MQ0=0;MQRankSum=0.227;QD=5.42;ReadPosRankSum=3.149;VQSLOD=2.3472;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,20:25:45.94:347,46,0	0/1:11,1:13:4.05:4,0,108	0/1:21,1:14:7.21:7,0,63	0/0:16,0:14:12.45:0,12,104	1/1:7,14:21:8.62:226,9,0	0/0:16,2:18:15.33:0,15,279	0/0:16,1:17:20.13:0,20,343	0/0:14,0:34:39.88:0,40,234	0/0:17,2:19:8.14:0,8,240	1/1:6,20:26:30.44:385,30,0	1/1:2,14:16:9.60:233,10,0	0/1:19,1:21:8.85:9,0,356	0/0:20,0:21:34.90:0,35,353	0/0:14,0:14:10.98:0,11,252	0/0:15,1:16:14.20:0,14,273	0/0:19,0:20:55.02:0,55,469	0/0:16,0:16:36.06:0,36,350	0/1:15,0:15:8.42:25,0,8	0/1:18,1:18:8.54:9,0,208	0/0:24,0:25:44.67:0,45,392	0/0:7,0:7:12:0,12,111	0/0:20,1:22:21.64:0,22,327	0/0:15,0:18:35.88:0,36,325	0/0:20,0:20:45.07:0,45,438	0/1:16,3:21:12.58:13,0,258	0/0:19,1:26:43.47:0,43,510	0/0:24,3:27:16.23:0,16,461	0/0:8,1:10:7.97:0,8,221
chr10	69076363	.	T	TA	237.58	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-3.952;DP=499;FS=0.000;HRun=1;HaplotypeScore=72.7877;InbreedingCoeff=0.8473;MQ=54.27;MQ0=20;MQRankSum=1.677;QD=11.88;ReadPosRankSum=-2.345;VQSLOD=1.1151;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:49.38:0,49,284	0/0:10,0:10:14.96:0,15,129	0/0:36,0:9:13.37:0,13,85	0/0:28,0:11:8.08:0,8,77	0/0:23,0:23:52.79:0,53,324	0/0:9,0:9:20.86:0,21,155	0/0:8,0:9:17.99:0,18,186	1/1:5,14:20:41.43:332,41,0	0/0:14,0:14:38.89:0,39,334	0/0:15,0:15:38.83:0,39,317	0/0:15,0:15:26.53:0,27,173	0/0:17,0:17:23.98:0,24,226	0/0:17,0:17:38.62:0,39,301	0/0:15,0:15:26.25:0,26,203	0/0:10,0:11:23.45:0,23,198	0/0:9,0:9:20.93:0,21,196	0/0:30,0:30:59.77:0,60,528	0/0:17,0:16:32.75:0,33,260	0/0:17,0:16:44.48:0,44,340	0/0:19,0:20:32.90:0,33,272	0/0:5,0:5:11.95:0,12,103	0/0:10,0:9:20.89:0,21,164	0/0:20,0:19:38.93:0,39,321	0/0:28,0:27:36.41:0,36,280	0/0:13,0:13:20.92:0,21,175	0/0:17,0:16:45.47:0,45,436	0/0:19,0:20:46.91:0,47,381	0/0:16,0:13:19.94:0,20,143
chr10	69077313	.	GTCTA	G	1750.74	PASS	AB=0.983;AC=10;AF=0.192;AN=52;BaseQRankSum=7.219;DP=609;FS=6.795;HRun=0;HaplotypeScore=103.7287;InbreedingCoeff=0.7651;MQ=58.75;MQ0=10;MQRankSum=2.542;QD=12.78;ReadPosRankSum=0.469;VQSLOD=2.3828;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:30:33.03:0,33,364	0/0:5,0:5:9.03:0,9,203	./.	./.	0/0:18,0:16:11.80:0,12,157	0/0:23,0:22:33.10:0,33,662	0/0:20,0:20:29.99:0,30,387	0/0:54,0:54:50.44:0,50,380	0/0:10,0:22:15.05:0,15,247	1/1:13,21:34:60.08:795,60,0	1/1:9,13:21:32.98:413,33,0	0/0:12,0:25:15.05:0,15,234	0/0:20,0:20:36.11:0,36,745	0/0:14,0:14:21.05:0,21,436	0/0:21,0:21:38.89:0,39,753	0/0:26,0:26:48.12:0,48,946	0/0:22,0:22:30.07:0,30,546	0/0:19,0:19:32.53:0,33,519	0/0:20,0:18:14.78:0,15,251	0/0:7,0:7:9.03:0,9,212	0/0:26,0:26:45.14:0,45,932	0/0:23,0:22:42.13:0,42,890	1/1:6,12:18:18:281,18,0	1/1:11,15:25:27.09:411,27,0	0/0:20,0:20:21.15:0,21,832	0/1:27,1:28:1.69:2,0,821	0/0:23,0:23:51.17:0,51,1114	0/1:9,0:8:7.99:8,0,126
chr10	69077393	.	CCTAT	C	3554.95	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=12.359;DP=752;FS=15.446;HRun=0;HaplotypeScore=132.8667;InbreedingCoeff=0.7766;MQ=67.13;MQ0=9;MQRankSum=-1.234;QD=24.18;ReadPosRankSum=-3.266;VQSLOD=1.5861;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,24:29:60.21:1003,60,0	0/0:7,0:7:18.06:0,18,445	0/0:57,0:23:7.60:0,8,283	0/1:29,0:13:21.28:21,0,59	1/1:7,29:36:69.12:1093,69,0	0/0:19,0:19:48.16:0,48,1187	0/0:17,0:17:33.10:0,33,744	1/1:21,32:53:96.22:1437,96,0	0/0:20,0:20:48.16:0,48,1187	0/0:32,0:32:66.23:0,66,1601	0/0:18,1:19:4.01:0,4,1203	0/0:21,0:21:42.14:0,42,1039	0/0:14,0:14:36.12:0,36,890	0/0:22,0:22:60.21:0,60,1474	0/0:31,0:31:84.29:0,84,2069	0/0:27,0:27:60.21:0,60,1484	0/0:33,0:32:84.29:0,84,2041	0/0:29,0:29:68.26:0,68,1593	0/0:21,0:21:48.16:0,48,1148	0/0:24,0:24:72.23:0,72,1727	0/0:25,0:25:66.23:0,66,1615	0/0:20,0:20:51.16:0,51,1195	0/0:27,0:27:63.22:0,63,1555	0/0:23,0:23:54.19:0,54,1335	0/0:41,0:41:84.29:0,84,2078	0/0:25,0:25:66.23:0,66,1633	0/0:30,0:30:78.27:0,78,1884	0/0:21,0:21:60.21:0,60,1484
chr10	69079189	.	GA	G	1144.56	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.588;DP=539;FS=16.710;HRun=6;HaplotypeScore=57.1265;InbreedingCoeff=0.9927;MQ=76.61;MQ0=0;MQRankSum=-2.542;QD=20.81;ReadPosRankSum=1.496;VQSLOD=2.0625;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,34:38:86.13:880,86,0	0/0:8,0:8:24.08:0,24,316	0/0:12,0:12:27.08:0,27,346	0/0:11,0:11:17.93:0,18,188	1/1:1,16:17:36.09:386,36,0	0/0:20,0:20:51.15:0,51,653	0/0:27,0:27:75.22:0,75,957	0/0:15,0:15:42.13:0,42,536	0/0:11,0:11:30.10:0,30,395	0/0:25,0:25:57.19:0,57,762	0/0:12,0:12:33.11:0,33,434	0/0:10,0:10:30.08:0,30,380	0/0:12,0:12:30.09:0,30,381	0/0:14,0:14:30.10:0,30,395	0/0:19,0:19:54.17:0,54,698	0/0:12,0:12:33.11:0,33,434	0/0:47,0:47:99:0,132,1736	0/0:26,0:26:63.15:0,63,794	0/0:15,0:15:42.11:0,42,524	0/0:19,0:19:36.11:0,36,460	0/0:22,0:22:66.20:0,66,853	0/0:15,0:15:39.13:0,39,510	0/0:22,0:22:54.18:0,54,706	0/0:24,0:23:66.21:0,66,868	0/0:20,0:20:57.17:0,57,724	0/0:29,0:29:84.25:0,84,1058	0/0:19,0:19:54.16:0,54,694	0/0:18,0:18:48.13:0,48,603
chr10	69079243	.	G	GCGAGGC	7153.82	PASS	AB=0.962;AC=13;AF=0.232;AN=56;BaseQRankSum=0.488;DP=545;FS=0.000;HRun=0;HaplotypeScore=115.3891;InbreedingCoeff=0.8849;MQ=74.82;MQ0=0;MQRankSum=-11.399;QD=41.84;ReadPosRankSum=-3.017;VQSLOD=3.9730;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:26,16:41:60.18:1646,60,0	0/0:9,0:9:24.08:0,24,533	0/0:7,0:7:9.03:0,9,188	0/0:16,0:16:18.05:0,18,349	1/1:7,8:17:24.07:728,24,0	0/0:21,0:21:57.20:0,57,1265	0/0:36,0:36:93.30:0,93,2006	1/1:32,0:32:57.65:1442,58,0	0/0:16,0:16:42.13:0,42,868	1/1:11,11:22:36.12:1151,36,0	1/1:2,9:12:27.09:852,27,0	0/0:11,0:11:33.11:0,33,715	0/0:9,0:9:21.07:0,21,465	0/0:12,0:12:33.11:0,33,732	0/0:18,0:18:51.18:0,51,1124	0/0:10,0:10:27.07:0,27,553	0/0:36,0:36:96.33:0,96,2100	1/1:10,11:21:36.12:1228,36,0	0/0:13,0:13:36.11:0,36,758	0/0:14,0:14:33.11:0,33,715	0/0:36,0:36:99:0,102,2130	0/0:11,0:11:27.08:0,27,556	0/0:9,0:9:21.06:0,21,424	0/0:25,0:25:63.22:0,63,1317	0/0:20,0:20:45.15:0,45,998	0/1:24,1:25:99:106,0,971	0/0:22,0:22:57.20:0,57,1265	0/0:23,0:23:63.19:0,63,1353
chr10	69079244	.	C	CGAGGCA	7094.47	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=3.296;DP=550;FS=2.481;HRun=0;HaplotypeScore=118.9038;InbreedingCoeff=0.5118;MQ=71.46;MQ0=0;MQRankSum=-10.702;QD=40.54;ReadPosRankSum=-2.672;VQSLOD=4.5015;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:44,0:43:43.92:1222,0,44	0/0:9,0:9:24.08:0,24,553	0/0:5,0:5:12:0,12,227	0/0:14,0:14:20.10:0,20,386	1/1:17,0:17:0.68:573,1,0	0/0:22,0:22:57.20:0,57,1314	0/0:35,0:35:99:0,99,2158	1/1:12,25:39:96.75:2635,97,0	0/0:15,0:15:42.14:0,42,934	1/1:21,0:21:1.28:894,1,0	1/1:11,0:11:10:665,10,0	0/0:11,0:11:33.11:0,33,756	0/0:12,0:12:27.07:0,27,536	0/0:13,0:13:33.11:0,33,758	0/0:18,0:18:51.18:0,51,1175	0/0:10,0:10:30.09:0,30,613	0/0:36,0:36:99:0,105,2265	0/1:20,0:20:17.80:1039,0,18	0/0:12,0:12:36.12:0,36,802	0/0:14,0:14:33.11:0,33,756	0/0:37,0:37:99:0,105,2307	0/0:11,0:11:27.09:0,27,593	0/0:9,0:9:21.07:0,21,460	0/0:25,0:25:69.21:0,69,1475	0/0:22,0:22:51.13:0,51,1083	0/1:23,0:23:66.83:67,0,1085	0/0:22,0:22:63.15:0,63,1359	0/0:23,0:23:63.22:0,63,1420
chr10	69079527	.	G	GT	1093.75	PASS	AB=0.932;AC=9;AF=0.161;AN=56;BaseQRankSum=-0.280;DP=757;FS=22.121;HRun=11;HaplotypeScore=108.7170;InbreedingCoeff=0.3222;MQ=63.52;MQ0=1;MQRankSum=-3.713;QD=6.75;ReadPosRankSum=-2.549;VQSLOD=-0.0419;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:47:99:0,112,847	0/0:14,0:16:3.64:0,4,190	0/1:17,0:18:9.45:9,0,54	0/1:15,0:13:14.79:15,0,30	0/0:27,0:27:56.73:0,57,441	0/1:23,2:27:3.03:3,0,325	0/0:31,0:34:80.80:0,81,598	0/0:7,0:27:37.53:0,38,108	0/0:27,0:27:52.04:0,52,514	1/1:9,21:32:65.50:742,65,0	1/1:1,19:21:44.92:440,45,0	0/0:32,3:36:55.25:0,55,599	0/0:29,0:29:65.67:0,66,511	0/0:24,2:26:6.63:0,7,342	0/0:37,0:37:92.60:0,93,719	0/0:16,3:20:44.32:0,44,332	0/0:38,0:38:99:0,108,832	0/1:9,2:11:6.55:7,0,138	0/0:31,1:33:37.27:0,37,462	0/0:28,1:30:70.72:0,71,540	0/0:21,0:24:41.91:0,42,294	0/0:22,0:23:45.92:0,46,352	0/0:15,0:15:29.85:0,30,232	0/0:31,0:32:73.71:0,74,563	0/0:21,0:21:38.76:0,39,302	0/1:29,5:38:21.15:21,0,468	0/0:22,0:23:1.82:0,2,283	0/0:29,0:29:77.67:0,78,604
chr10	69079662	.	T	TGAGA	6341.92	PASS	AB=0.736;AC=11;AF=0.196;AN=56;BaseQRankSum=-4.532;DP=925;FS=2.314;HRun=0;HaplotypeScore=386.2895;InbreedingCoeff=0.6602;MQ=51.38;MQ0=1;MQRankSum=-2.765;QD=25.78;ReadPosRankSum=-0.725;VQSLOD=3.3022;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,32:40:29.46:1500,29,0	0/0:12,0:12:21.07:0,21,371	0/0:43,0:37:75.30:0,75,1283	0/0:36,0:32:81.22:0,81,1264	1/1:25,12:37:33.25:573,33,0	0/0:24,0:25:37.56:0,38,565	0/0:30,0:31:62.43:0,62,1002	1/1:6,13:24:60.10:1235,60,0	0/0:28,0:28:47.14:0,47,676	0/1:29,24:52:99:1727,0,158	1/1:9,15:25:11.95:552,12,0	0/0:37,0:37:52.81:0,53,828	0/0:26,0:26:59:0,59,987	0/0:36,0:37:77.72:0,78,1303	0/0:43,0:43:74.13:0,74,1222	0/0:20,0:20:44.39:0,44,677	0/0:29,0:29:63.17:0,63,1064	0/1:3,12:15:12.43:736,0,12	0/0:21,0:21:51.16:0,51,856	0/0:39,0:39:35.18:0,35,750	0/0:68,0:67:99:0,159,2717	0/0:39,0:39:43.84:0,44,688	0/0:27,0:27:45.50:0,45,538	0/0:42,0:42:74.31:0,74,1255	0/0:37,0:37:41.65:0,42,850	0/1:50,2:52:17.90:18,0,1889	0/0:24,0:24:46.13:0,46,746	0/0:14,0:14:35.92:0,36,521
chr10	69079674	.	GT	G	1419.05	PASS	AB=0.778;AC=10;AF=0.179;AN=56;BaseQRankSum=12.037;DP=1000;FS=82.906;HRun=1;HaplotypeScore=345.6052;InbreedingCoeff=-0.2056;MQ=48.98;MQ0=5;MQRankSum=-9.411;QD=4.10;ReadPosRankSum=2.335;VQSLOD=0.2474;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,1:37:37.50:0,37,1169	0/1:10,3:13:14.66:15,0,395	0/0:51,3:36:62.22:0,62,1410	0/0:45,0:36:88.08:0,88,1339	0/1:15,14:29:1.29:1,0,347	0/0:21,3:24:48.37:0,48,727	0/0:31,4:35:33.91:0,34,1144	0/0:34,0:34:99:0,102,1571	0/0:34,2:35:49.92:0,50,1213	0/1:42,19:60:99:543,0,1562	0/0:21,7:28:35.96:0,36,428	0/0:32,3:35:51.65:0,52,1313	0/0:24,2:26:33.74:0,34,1073	0/0:38,4:42:62.71:0,63,1442	0/0:46,2:48:99:0,114,1712	0/0:22,7:29:21.69:0,22,817	0/0:28,1:29:29.46:0,29,1102	0/0:17,0:17:48.16:0,48,753	0/0:31,1:32:47:0,47,1198	0/1:29,10:39:61.83:62,0,718	0/0:63,0:62:99:0,153,2386	0/1:30,13:43:99:144,0,666	0/1:20,8:28:99:163,0,395	0/0:36,2:38:83.95:0,84,1219	0/1:25,8:33:99:111,0,663	0/1:48,10:58:99:255,0,1820	0/1:21,6:27:58.80:59,0,787	0/1:9,6:15:99:206,0,386
chr10	69079694	.	T	TG	840.67	PASS	AB=0.837;AC=8;AF=0.143;AN=56;BaseQRankSum=9.208;DP=978;FS=59.444;HRun=0;HaplotypeScore=352.5075;InbreedingCoeff=-0.1800;MQ=44.00;MQ0=9;MQRankSum=-6.295;QD=2.91;ReadPosRankSum=-1.526;VQSLOD=1.4354;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,2:36:66.66:0,67,867	0/1:6,6:12:80.35:80,0,173	0/0:49,0:21:10.74:0,11,550	0/0:40,0:26:14.07:0,14,626	0/0:25,1:26:26.34:0,26,202	0/0:25,1:26:26.80:0,27,565	0/0:29,6:36:72.78:0,73,817	0/1:31,6:37:99:316,0,759	0/0:28,9:36:62.63:0,63,734	0/1:52,8:61:99:188,0,1564	0/0:21,3:25:31.67:0,32,318	0/0:33,6:38:70.26:0,70,831	0/0:26,1:27:54.87:0,55,762	0/0:34,4:38:23.49:0,23,744	0/0:43,4:48:67.03:0,67,1306	0/0:22,6:29:39.19:0,39,521	0/0:21,1:24:59.93:0,60,709	0/1:13,2:15:48.77:49,0,478	0/1:33,7:40:92.06:92,0,919	0/1:27,8:36:10.91:11,0,577	0/0:50,2:51:99:0,121,1515	0/0:38,7:48:28.27:0,28,511	0/0:23,4:30:47.31:0,47,499	0/0:34,0:34:62.69:0,63,704	0/0:26,5:34:0.18:0,0,460	0/1:49,4:58:99:168,0,1522	0/1:25,4:29:70.92:71,0,676	0/0:10,0:11:26.81:0,27,281
chr10	69079702	.	G	GTGCACA	6589.61	PASS	AB=0.891;AC=21;AF=0.375;AN=56;BaseQRankSum=12.382;DP=921;FS=97.692;HRun=0;HaplotypeScore=413.7621;InbreedingCoeff=-0.5868;MQ=39.85;MQ0=9;MQRankSum=-10.071;QD=9.84;ReadPosRankSum=1.484;VQSLOD=-0.1714;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:53.69:0,54,1129	0/1:9,2:11:99:160,0,179	0/0:39,0:13:21.07:0,21,415	0/0:32,0:18:44.89:0,45,727	0/1:18,9:27:99:476,0,164	0/1:20,3:23:99:197,0,666	0/1:35,0:35:3.87:4,0,1028	0/0:35,0:34:78.39:0,78,1407	0/1:36,1:36:98.85:99,0,1077	0/1:47,13:60:99:1368,0,1889	0/1:16,9:25:99:416,0,411	0/1:37,2:38:99:159,0,1118	0/1:24,1:25:99:114,0,947	0/1:34,3:37:99:184,0,907	0/0:48,0:48:95.41:0,95,1989	0/1:23,0:23:68.93:69,0,606	0/1:21,1:22:41.33:41,0,901	0/0:17,0:17:44.13:0,44,897	0/1:38,0:38:20.83:21,0,1590	0/1:26,8:34:99:506,0,799	0/0:46,0:45:99:0,105,2221	0/1:34,10:44:99:723,0,541	0/1:27,3:30:99:262,0,695	0/1:29,2:31:99:129,0,795	0/1:30,4:34:99:202,0,707	0/1:49,8:58:99:790,0,2424	0/1:24,2:26:99:256,0,609	0/1:7,3:11:99:415,0,284
chr10	69079711	.	T	TA	686.38	PASS	AB=0.924;AC=17;AF=0.304;AN=56;BaseQRankSum=9.067;DP=676;FS=79.405;HRun=0;HaplotypeScore=237.6048;InbreedingCoeff=-0.2745;MQ=37.66;MQ0=4;MQRankSum=-8.627;QD=2.03;ReadPosRankSum=-1.202;VQSLOD=-0.2391;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,2:26:19.77:0,20,255	0/1:10,1:11:30.34:46,0,30	0/0:17,0:3:9.03:0,9,116	0/0:22,0:10:14.88:0,15,230	1/1:20,0:20:8.95:29,9,0	0/1:17,1:18:18.58:19,0,131	0/0:22,5:27:12.42:0,12,126	0/1:21,7:27:99:255,0,528	0/0:19,9:28:9.23:0,9,126	0/0:44,0:44:99:0,121,1436	0/1:21,0:21:59.08:61,0,59	0/1:23,6:29:15.50:16,0,35	0/0:18,1:19:10.60:0,11,191	0/1:21,4:25:7.43:7,0,34	0/0:36,4:41:34.87:0,35,428	0/0:13,6:19:9.73:0,10,129	0/1:17,0:18:10.25:10,0,152	0/0:15,0:15:32.54:0,33,389	0/1:13,3:16:9.07:9,0,417	0/1:26,1:27:75.09:84,0,75	0/0:33,2:36:51.11:0,51,675	0/1:30,0:30:99:117,0,128	0/1:21,0:21:26.78:27,0,50	0/1:27,0:28:4.52:5,0,187	0/1:23,0:24:32.45:32,0,144	0/0:40,3:43:27.14:0,27,1360	0/1:12,3:15:70.86:71,0,140	0/1:7,0:7:56.72:57,0,101
chr10	69080600	.	G	GA	458.38	PASS	AB=0.997;AC=28;AF=0.519;AN=54;BaseQRankSum=6.139;DP=544;FS=50.465;HRun=0;HaplotypeScore=446.1844;InbreedingCoeff=-0.1584;MQ=31.89;MQ0=11;MQRankSum=-3.616;QD=1.03;ReadPosRankSum=-0.476;VQSLOD=0.1597;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:29:4.57:39,0,5	0/1:11,0:10:5.54:6,0,44	0/0:4,0:1:2.04:0,2,6	./.	1/1:27,0:26:6.67:24,7,0	1/1:18,0:18:6.39:53,6,0	0/0:20,0:20:1.19:0,1,57	0/0:23,0:18:1.02:0,1,117	0/1:22,0:22:13.75:14,0,15	0/1:45,0:43:45.43:45,0,186	1/1:29,1:30:5.34:59,5,0	0/0:16,0:15:2.69:0,3,32	0/1:20,0:19:8.25:8,0,53	1/1:15,0:15:13.91:58,14,0	0/1:16,0:16:8.71:9,0,15	0/1:21,0:21:6.48:6,0,52	0/1:9,0:9:4.20:4,0,55	1/1:4,0:4:2.03:14,2,0	0/1:9,0:7:5.13:5,0,22	0/1:23,1:24:13.51:22,0,14	0/0:8,0:8:1.69:0,2,27	1/1:34,2:35:12.74:83,13,0	1/1:21,0:20:3.61:20,4,0	0/0:22,0:20:9:0,9,56	0/1:32,0:30:6.98:30,0,7	0/1:27,0:26:64.14:64,0,96	0/1:17,0:16:32.24:32,0,36	0/1:13,0:12:10.42:10,0,74
chr10	69080604	.	G	GA	1275.84	PASS	AB=0.842;AC=22;AF=0.393;AN=56;BaseQRankSum=8.125;DP=659;FS=95.244;HRun=0;HaplotypeScore=248.9767;InbreedingCoeff=-0.2981;MQ=33.62;MQ0=17;MQRankSum=-4.069;QD=2.49;ReadPosRankSum=0.522;VQSLOD=-0.2675;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,6:34:5.77:0,6,97	0/0:9,2:10:3.59:0,4,43	0/1:9,0:4:0.97:1,0,71	0/0:7,0:1:3.01:0,3,41	1/1:23,9:31:1.76:6,2,0	1/1:15,4:19:9.93:53,10,0	0/0:22,2:24:10:0,10,185	0/1:35,4:34:36.13:36,0,369	0/1:19,4:23:64.18:84,0,64	0/1:45,14:57:99:451,0,399	0/1:23,13:36:16.68:17,0,27	0/1:17,0:16:1.56:2,0,60	0/1:21,3:23:2.24:2,0,134	0/1:14,3:17:18.15:18,0,33	0/0:17,3:20:1.72:0,2,9	0/0:21,2:23:5.18:0,5,162	0/0:10,0:10:14.73:0,15,150	0/0:7,0:6:5.39:0,5,70	0/1:14,1:11:92.51:93,0,111	0/1:13,14:27:16.56:17,0,92	0/0:9,0:8:2.54:0,3,22	0/1:31,10:39:18.73:60,0,19	1/1:13,9:21:5.48:29,5,0	0/1:22,1:21:6.27:6,0,41	0/1:24,15:37:29.55:171,0,30	0/1:30,5:34:99:274,0,551	0/1:12,7:18:75.42:75,0,94	0/1:13,3:15:27.96:28,0,336
chr10	69080608	.	G	GA	1187.45	PASS	AB=0.947;AC=19;AF=0.339;AN=56;BaseQRankSum=10.156;DP=717;FS=116.575;HRun=0;HaplotypeScore=227.3486;InbreedingCoeff=-0.1379;MQ=35.42;MQ0=22;MQRankSum=-5.488;QD=2.51;ReadPosRankSum=3.026;VQSLOD=-0.1948;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:12.77:0,13,185	0/1:10,1:10:18.44:18,0,44	0/0:15,0:6:14.08:0,14,172	0/0:11,0:4:9.86:0,10,102	1/1:29,5:33:4.81:20,5,0	1/1:19,1:20:9.57:44,10,0	0/0:24,0:24:12.96:0,13,208	0/1:43,0:39:99:239,0,615	0/1:24,0:24:79.31:79,0,140	0/1:51,9:58:99:222,0,570	0/1:34,4:38:47.68:48,0,83	0/0:19,0:17:9.37:0,9,76	0/1:22,1:23:27.97:28,0,206	0/1:18,0:18:9.76:10,0,36	0/0:21,0:21:3.66:0,4,20	0/0:25,0:24:10.78:0,11,185	0/0:12,0:12:11.06:0,11,210	0/0:7,1:7:8.39:0,8,93	0/1:16,0:12:64.55:65,0,165	0/0:33,1:34:2.89:0,3,249	0/0:11,0:10:8.54:0,9,85	0/1:36,5:39:5.11:104,0,5	1/1:26,0:24:7.22:29,7,0	0/0:23,0:21:7.70:0,8,62	0/1:38,2:38:47.11:220,0,47	0/1:37,3:40:99:157,0,648	0/1:18,1:18:32.51:33,0,153	0/1:17,0:16:36.09:36,0,346
chr10	69082560	.	C	CTGTG	4116.65	PASS	AB=0.886;AC=16;AF=0.286;AN=56;BaseQRankSum=10.829;DP=909;FS=0.416;HRun=0;HaplotypeScore=208.8976;InbreedingCoeff=0.8715;MQ=66.86;MQ0=6;MQRankSum=-6.426;QD=13.28;ReadPosRankSum=-4.248;VQSLOD=2.1643;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:26,18:44:35.92:824,36,0	0/0:12,0:12:33.07:0,33,498	0/0:50,0:35:43.73:0,44,596	0/1:49,0:35:3.63:4,0,588	1/1:18,10:30:43.02:690,43,0	0/0:25,0:25:45.14:0,45,723	0/0:38,0:39:74.93:0,75,1135	1/1:45,2:48:75.64:1194,76,0	0/0:33,0:35:84.18:0,84,1248	1/1:41,0:41:71.99:1013,72,0	1/1:23,0:25:4.09:65,4,0	0/0:35,0:37:87.24:0,87,1332	0/0:29,0:31:72.23:0,72,1155	0/0:24,0:25:62.98:0,63,967	0/0:30,0:31:68.46:0,68,1175	0/0:27,0:30:66.20:0,66,1031	0/0:31,0:31:50.42:0,50,1071	1/1:12,0:12:11.71:171,12,0	0/0:25,0:23:36.10:0,36,548	0/0:29,0:31:80.55:0,81,1201	0/0:56,0:55:99:0,126,2007	0/0:41,0:44:78.35:0,78,1583	1/1:18,3:31:12.76:155,13,0	0/1:19,0:27:0:0,0,0	0/0:23,0:24:34.20:0,34,851	0/0:33,0:34:78.22:0,78,1175	0/0:18,0:18:42.13:0,42,670	0/0:17,0:17:45.02:0,45,652
chr10	69082608	.	G	GGT	7076.49	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-0.003;DP=929;FS=1.055;HRun=0;HaplotypeScore=160.2811;InbreedingCoeff=0.9983;MQ=62.91;MQ0=2;MQRankSum=-3.232;QD=29.86;ReadPosRankSum=-5.616;VQSLOD=4.5699;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:15,30:45:83.60:1383,84,0	0/0:14,0:14:30.09:0,30,375	0/0:45,0:39:70.73:0,71,976	0/0:49,0:44:78.46:0,78,904	1/1:5,15:20:35.35:580,35,0	0/0:19,0:19:45.04:0,45,525	0/0:44,0:44:99:0,111,1346	1/1:14,30:44:95.99:1520,96,0	0/0:44,0:44:99:0,102,1276	1/1:14,23:37:40.25:1085,40,0	1/1:9,12:21:42.14:691,42,0	0/0:39,0:39:77.45:0,77,1179	0/0:36,0:36:93.28:0,93,1148	0/0:21,0:22:33.60:0,34,686	0/0:44,0:44:99:0,120,1501	0/0:31,0:31:69.22:0,69,863	0/0:30,0:30:63.14:0,63,758	1/1:6,10:16:40.89:592,41,0	0/0:22,0:22:48.14:0,48,587	0/0:32,0:32:84.26:0,84,1038	0/0:78,0:78:99:0,202,2512	0/0:40,0:40:99:0,102,1276	1/1:10,15:25:26.98:445,27,0	1/1:7,22:28:19.62:781,20,0	0/0:30,0:30:81.20:0,81,973	0/0:35,1:36:37.69:0,38,967	0/0:21,0:22:66.04:0,66,802	0/0:13,0:14:23.91:0,24,276
chr10	69083441	.	CAG	C	458.92	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.223;DP=671;FS=20.587;HRun=0;HaplotypeScore=87.3086;InbreedingCoeff=0.9012;MQ=70.67;MQ0=3;MQRankSum=1.505;QD=16.39;ReadPosRankSum=-1.902;VQSLOD=1.7383;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:56,1:57:99:0,100,2162	0/0:11,0:11:30.10:0,30,502	0/0:26,0:18:36.07:0,36,556	0/0:34,0:29:24.59:0,25,402	0/0:18,1:19:7.09:0,7,660	0/0:18,0:18:42.13:0,42,655	0/0:26,1:27:63.20:0,63,1028	1/1:10,18:28:45.12:554,45,0	0/0:23,1:24:22.01:0,22,876	0/0:25,0:25:72.19:0,72,1122	0/0:16,0:16:26.96:0,27,451	0/0:19,0:19:48.16:0,48,803	0/0:16,0:16:45.15:0,45,753	0/0:17,0:17:33.11:0,33,552	0/0:24,0:24:57.19:0,57,944	0/0:33,0:33:81.26:0,81,1318	0/0:27,0:27:69.71:0,70,1138	0/0:18,0:18:42.04:0,42,616	0/0:18,0:18:42.10:0,42,604	0/0:23,0:23:54.18:0,54,893	0/0:39,0:39:99:0,108,1742	0/0:14,0:14:36.12:0,36,602	0/0:24,0:24:69.24:0,69,1131	0/0:41,0:41:99:0,99,1588	0/0:14,0:14:39.13:0,39,643	0/0:29,0:28:62.49:0,62,1118	0/0:22,1:23:27.96:0,28,881	0/0:7,0:7:15.03:0,15,217
chr10	69085323	.	GA	G	2445.77	PASS	AB=0.734;AC=12;AF=0.214;AN=56;BaseQRankSum=8.759;DP=730;FS=5.852;HRun=11;HaplotypeScore=81.9111;InbreedingCoeff=0.7812;MQ=70.54;MQ0=11;MQRankSum=-0.118;QD=12.11;ReadPosRankSum=1.795;VQSLOD=3.5827;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,31:38:76.94:621,77,0	0/0:3,0:6:5.81:0,6,34	0/0:73,1:29:14.29:0,14,260	0/0:62,0:30:16.15:0,16,215	1/1:7,25:32:65.85:535,66,0	0/0:15,0:15:21.02:0,21,356	0/0:9,0:17:46.82:0,47,370	0/1:8,17:26:3.77:299,0,4	0/0:17,0:18:47.88:0,48,478	0/0:34,0:34:77.86:0,78,804	0/0:17,0:18:38.86:0,39,365	0/0:18,0:19:32.22:0,32,371	0/0:14,0:14:36.09:0,36,384	0/0:20,0:19:22.33:0,22,373	0/0:26,0:25:58.96:0,59,617	0/0:23,0:25:56.95:0,57,574	0/1:31,5:36:11.30:11,0,697	1/1:5,19:25:21.80:351,22,0	0/0:20,0:20:54.05:0,54,529	0/0:26,1:29:37.94:0,38,541	0/0:22,0:24:68.86:0,69,687	0/0:28,0:28:72.18:0,72,765	1/1:3,22:25:62.92:517,63,0	1/1:4,16:20:10.26:289,10,0	0/0:19,0:19:21.63:0,22,397	0/0:24,0:24:57.06:0,57,570	0/0:26,0:26:66.14:0,66,686	0/0:7,0:7:9.01:0,9,89
chr10	69086565	.	TTC	T	215.61	PASS	AB=0.902;AC=14;AF=0.280;AN=50;BaseQRankSum=5.273;DP=570;FS=25.884;HRun=0;HaplotypeScore=76.5279;InbreedingCoeff=0.1236;MQ=63.79;MQ0=10;MQRankSum=-1.169;QD=0.95;ReadPosRankSum=3.255;VQSLOD=-0.0464;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:15,0:21:9.77:45,10,0	0/0:12,0:12:9.01:0,9,102	./.	./.	0/1:19,0:25:0:0,0,0	0/1:25,0:26:13.26:13,0,77	0/1:24,1:25:51.55:52,0,214	0/0:45,0:44:11.05:0,11,67	0/0:13,0:13:9.01:0,9,112	0/0:25,0:25:35.96:0,36,357	0/0:22,0:20:11.98:0,12,99	0/1:16,0:16:31.27:31,0,98	0/0:12,0:12:9.03:0,9,133	0/0:9,0:9:9:0,9,92	0/1:8,1:9:20.20:20,0,121	0/1:14,1:15:17.93:26,0,18	0/1:27,1:27:11.21:11,0,195	1/1:13,8:21:14.87:143,15,0	0/0:15,0:14:3:0,3,27	0/0:22,0:21:6.01:0,6,69	0/0:20,0:19:15:0,15,143	0/0:21,0:21:5.99:0,6,50	1/1:16,0:21:2.84:14,3,0	0/1:12,0:15:3.14:3,0,14	0/0:27,0:27:2.96:0,3,45	0/0:22,0:22:21.95:0,22,289	0/0:19,0:19:5.96:0,6,43	./.
chr10	69092659	.	G	GA	576.25	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=3.709;DP=559;FS=9.899;HRun=9;HaplotypeScore=58.8122;InbreedingCoeff=0.7098;MQ=72.28;MQ0=0;MQRankSum=-0.273;QD=13.10;ReadPosRankSum=-3.730;VQSLOD=1.5809;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:65.95:0,66,567	0/0:8,0:8:21:0,21,182	0/0:11,0:10:15.09:0,15,150	0/0:15,0:14:25.34:0,25,194	0/0:19,1:20:23.82:0,24,435	0/0:20,0:20:50.95:0,51,434	0/0:11,0:11:23.96:0,24,203	1/1:9,22:30:40.12:671,40,0	0/0:13,0:13:29.98:0,30,260	0/0:27,0:27:71.97:0,72,622	0/0:21,0:21:50.98:0,51,443	0/0:13,0:13:32.98:0,33,286	0/0:17,0:17:41.99:0,42,364	0/0:13,0:13:5.93:0,6,279	0/0:20,0:20:44.98:0,45,391	0/1:13,0:13:0.14:0,0,227	0/0:31,0:31:89.97:0,90,781	0/0:24,0:23:65.94:0,66,566	0/0:20,0:21:53:0,53,449	0/0:20,0:20:47.96:0,48,417	0/0:26,0:26:74.97:0,75,651	0/0:25,0:25:68.93:0,69,599	0/0:26,0:26:59.96:0,60,520	0/0:20,0:20:56.99:0,57,495	0/0:20,0:20:59.99:0,60,521	0/0:24,0:24:65.99:0,66,573	0/0:25,0:25:68.98:0,69,599	0/0:19,0:19:56.99:0,57,494
chr10	69097081	.	AG	A	5104.01	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=12.107;DP=628;FS=0.000;HRun=2;HaplotypeScore=61.6513;InbreedingCoeff=0.9936;MQ=85.44;MQ0=0;MQRankSum=-3.538;QD=35.20;ReadPosRankSum=0.379;VQSLOD=4.9583;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,26:26:75.24:971,75,0	0/0:5,0:5:12.03:0,12,161	0/0:27,0:27:78.13:0,78,1128	0/0:22,0:22:57.01:0,57,741	1/1:0,19:19:57.12:699,57,0	0/0:20,0:20:60.19:0,60,878	0/0:19,0:19:57.18:0,57,832	1/1:0,28:28:84.26:1077,84,0	0/0:25,0:25:62.50:0,62,1044	1/1:1,26:27:78.17:962,78,0	1/1:1,21:22:56.97:694,57,0	0/0:21,0:21:57.18:0,57,830	0/0:12,0:12:36.09:0,36,492	0/0:24,0:24:66.19:0,66,930	0/0:29,0:29:87.27:0,87,1264	0/0:19,0:19:57.18:0,57,834	0/0:31,0:31:93.30:0,93,1370	1/1:0,23:23:54.18:701,54,0	0/0:23,0:23:63.17:0,63,865	0/0:25,0:25:72.24:0,72,1076	0/0:26,0:26:78.24:0,78,1128	0/0:17,0:17:48.16:0,48,711	0/0:23,0:23:69.22:0,69,1011	0/0:27,0:27:81.27:0,81,1212	0/0:18,0:18:54.18:0,54,807	0/0:27,1:28:45.31:0,45,1155	0/0:32,0:32:96.33:0,96,1437	0/0:10,0:10:30.10:0,30,449
chr10	69097732	.	TGGTGGC	T	193.17	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=3.921;DP=600;FS=7.851;HRun=0;HaplotypeScore=113.7351;InbreedingCoeff=0.5937;MQ=63.78;MQ0=0;MQRankSum=-0.761;QD=5.85;ReadPosRankSum=-1.734;VQSLOD=1.2396;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:36:60.20:0,60,1621	0/0:14,0:14:30.10:0,30,852	0/0:12,0:12:22.27:0,22,420	0/1:12,0:11:17.91:18,0,299	0/0:23,0:23:30.09:0,30,699	0/0:19,0:18:24.08:0,24,690	0/0:45,0:45:87.30:0,87,2397	1/1:11,10:21:18.03:277,18,0	0/0:13,0:12:21.07:0,21,598	0/0:26,0:26:39.05:0,39,880	0/0:11,0:11:18.06:0,18,520	0/0:20,0:20:33.11:0,33,947	0/0:17,0:17:27.09:0,27,825	0/0:15,0:15:36.12:0,36,1104	0/0:10,0:9:15.05:0,15,454	0/0:11,0:10:21.07:0,21,606	0/0:32,0:31:75.26:0,75,2301	0/0:26,0:25:60.21:0,60,1900	0/0:24,0:24:33.11:0,33,721	0/0:19,0:19:21.07:0,21,487	0/0:43,0:43:86.98:0,87,2445	0/0:19,0:19:33.11:0,33,860	0/0:13,0:13:16.87:0,17,377	0/0:38,0:36:66.70:0,67,2070	0/0:28,0:28:63.22:0,63,1545	0/0:36,0:36:69.23:0,69,1534	0/0:6,0:6:9.03:0,9,232	0/0:10,0:10:21.07:0,21,583
chr10	69097963	.	ACT	A	146.18	PASS	AB=0.973;AC=22;AF=0.478;AN=46;BaseQRankSum=-1.243;DP=388;FS=2.079;HRun=0;HaplotypeScore=71.2737;InbreedingCoeff=-0.2079;MQ=69.82;MQ0=16;MQRankSum=-0.553;QD=0.49;ReadPosRankSum=-4.144;VQSLOD=0.6280;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:9,2:8:0:0,0,0	1/1:1,0:1:2.99:23,3,0	0/1:51,0:18:15.37:15,0,179	0/1:79,0:19:6.60:7,0,199	./.	1/1:5,0:5:2.98:24,3,0	0/1:20,1:13:0:0,0,0	./.	0/1:14,0:11:12.15:12,0,16	0/0:9,0:8:20.31:0,20,138	./.	0/1:9,0:9:17.03:41,0,17	0/1:15,0:14:42.39:42,0,69	0/1:9,0:8:12.03:12,0,62	0/1:15,0:14:15.43:20,0,15	0/1:15,0:11:6.28:6,0,56	0/1:11,1:11:7.14:7,0,60	0/1:11,1:10:31.35:31,0,57	0/1:5,0:3:0.68:1,0,25	./.	0/0:33,6:27:0.43:0,0,1	0/0:10,0:9:0:0,0,0	./.	0/0:14,1:8:1.21:0,1,23	1/1:9,0:7:2.68:11,3,0	0/1:10,0:7:4.23:4,0,82	0/0:3,0:3:5.98:0,6,55	1/1:2,0:2:2.04:6,2,0
chr10	69098036	.	CAT	C	54.93	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=4.198;DP=829;FS=1.400;HRun=0;HaplotypeScore=175.2677;InbreedingCoeff=0.7880;MQ=49.06;MQ0=17;MQRankSum=-4.802;QD=1.66;ReadPosRankSum=-2.101;VQSLOD=2.0783;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:23,1:23:3.86:14,4,0	0/0:11,0:11:30.09:0,30,576	0/0:48,0:12:35.93:0,36,501	0/0:43,0:14:28.92:0,29,402	0/0:17,0:15:2.88:0,3,58	0/0:17,0:16:44.95:0,45,786	0/0:45,0:44:75.18:0,75,1269	1/1:2,7:7:9.03:137,9,0	0/0:34,0:31:54.16:0,54,1022	0/0:41,0:40:99:0,111,1871	0/0:10,0:10:27.09:0,27,521	0/0:38,0:38:90.20:0,90,1611	0/0:30,0:30:75.20:0,75,1299	0/0:34,0:34:90.25:0,90,1618	0/0:32,1:33:60.91:0,61,1143	0/0:29,0:27:69.45:0,69,1233	0/0:34,1:31:55.75:0,56,1418	0/0:32,0:29:39.29:0,39,947	0/0:25,0:18:48.11:0,48,841	0/0:16,0:15:39.09:0,39,645	0/0:85,2:77:99:0,139,2522	0/0:30,0:30:72.22:0,72,1321	0/0:17,0:16:30.06:0,30,478	0/0:50,0:42:59.90:0,60,1117	0/0:17,0:17:45.14:0,45,814	0/0:41,1:40:99:0,114,2055	0/0:9,0:9:24.08:0,24,451	0/0:5,0:5:15.05:0,15,289
chr10	69098099	.	G	GAC	3479.63	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-1.595;DP=1010;FS=4.126;HRun=0;HaplotypeScore=167.5746;InbreedingCoeff=0.8739;MQ=48.25;MQ0=57;MQRankSum=-1.756;QD=25.03;ReadPosRankSum=-1.675;VQSLOD=3.6558;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,5:24:0.90:0,1,3	0/0:17,0:17:16.87:0,17,371	0/0:31,0:3:6.01:0,6,64	0/0:41,0:6:14.91:0,15,156	1/1:21,5:23:9.52:84,10,0	0/0:19,0:18:33.97:0,34,426	0/0:59,0:54:96.04:0,96,1149	0/0:12,0:5:4.53:0,5,25	0/0:44,0:39:66.04:0,66,829	1/1:37,17:51:99:1770,107,0	1/1:14,8:19:38.15:610,38,0	0/0:48,0:44:89.99:0,90,1126	0/0:39,0:36:78.23:0,78,982	0/0:32,0:31:63.20:0,63,812	0/0:35,0:35:56.73:0,57,710	0/0:28,0:28:60.11:0,60,775	0/0:46,0:42:76.27:0,76,1294	1/1:17,20:32:64.93:1017,65,0	0/0:38,0:16:33.05:0,33,394	0/0:28,0:28:64.18:0,64,861	0/0:117,1:111:99:0,259,3263	0/0:42,0:41:81.70:0,82,1012	0/0:23,0:23:62.69:0,63,724	0/0:49,0:45:73.49:0,73,1147	0/0:24,0:24:51.10:0,51,634	0/0:46,0:39:84.03:0,84,1084	0/0:17,0:16:35.89:0,36,419	0/0:7,0:7:17.97:0,18,212
chr10	69098109	.	G	GAC	247.13	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=9.705;DP=1034;FS=0.000;HRun=0;HaplotypeScore=175.7240;InbreedingCoeff=0.3439;MQ=47.94;MQ0=53;MQRankSum=-0.775;QD=1.77;ReadPosRankSum=-0.049;VQSLOD=2.5188;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,6:24:0.90:0,1,3	0/0:14,0:14:35.81:0,36,403	0/0:33,0:5:9.03:0,9,112	0/0:43,0:6:14.15:0,14,125	1/1:17,7:22:11.84:174,12,0	0/0:22,0:20:27.06:0,27,351	0/0:63,0:57:90.16:0,90,1149	0/0:11,0:5:5.98:0,6,51	0/0:44,0:40:62.85:0,63,761	0/1:55,0:51:99:100,0,248	0/1:23,0:20:8.41:26,0,8	0/0:48,0:44:84.02:0,84,1084	0/0:41,0:38:78.70:0,79,996	0/0:32,0:31:60.10:0,60,742	0/0:39,0:39:72.02:0,72,914	0/0:27,0:27:59.99:0,60,737	0/0:45,0:42:99:0,101,1298	0/1:38,0:34:66.38:66,0,85	0/0:39,0:14:33.11:0,33,425	0/0:29,0:28:74.28:0,74,899	0/0:124,0:115:99:0,265,3398	0/0:32,0:32:72.14:0,72,891	0/0:23,0:23:62.13:0,62,732	0/0:50,0:46:84.78:0,85,1214	0/0:28,0:28:51.88:0,52,639	0/0:52,0:43:98.63:0,99,1207	0/0:18,0:18:39.12:0,39,497	0/0:8,0:8:21.07:0,21,268
chr10	69098202	.	G	GAC	99.43	PASS	AB=0.941;AC=5;AF=0.089;AN=56;BaseQRankSum=5.118;DP=980;FS=0.000;HRun=0;HaplotypeScore=158.8511;InbreedingCoeff=0.5989;MQ=52.32;MQ0=20;MQRankSum=-1.863;QD=1.71;ReadPosRankSum=-1.677;VQSLOD=1.6835;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:7,9:15:6.02:96,6,0	0/0:6,0:6:12.04:0,12,160	0/0:43,0:22:45.01:0,45,560	0/0:40,0:19:32.57:0,33,380	1/1:2,8:9:3.01:52,3,0	0/0:17,0:17:33.11:0,33,439	0/0:48,0:48:99:0,117,1527	0/0:17,0:12:8.95:0,9,77	0/0:38,0:38:95.06:0,95,1309	0/0:45,0:44:99:0,111,1416	0/0:24,0:23:45.15:0,45,599	0/0:34,0:34:60.51:0,61,1144	0/0:38,0:37:91.52:0,92,1195	0/0:49,0:49:99:0,132,1693	0/0:51,0:51:99:0,114,1467	0/0:46,0:46:99:0,108,1394	0/0:36,0:36:90.25:0,90,1162	0/1:30,2:32:59.77:60,0,760	0/0:35,0:26:63.20:0,63,818	0/0:21,0:21:44.63:0,45,568	0/0:114,0:112:99:0,271,3525	0/0:36,0:34:47.46:0,47,637	0/0:24,0:23:48.14:0,48,624	0/0:51,0:51:99:0,117,1515	0/0:36,0:36:78.24:0,78,1022	0/0:40,0:39:93.24:0,93,1189	0/0:21,0:21:44.98:0,45,572	0/0:11,0:11:30.10:0,30,399
chr10	69098274	.	CATAG	C	517.97	PASS	AB=1.000;AC=3;AF=0.056;AN=54;BaseQRankSum=8.124;DP=980;FS=1.632;HRun=0;HaplotypeScore=184.3583;InbreedingCoeff=0.6268;MQ=53.42;MQ0=30;MQRankSum=-7.081;QD=15.70;ReadPosRankSum=-2.455;VQSLOD=3.2790;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:36:21.06:0,21,465	0/0:6,0:6:12.01:0,12,335	0/0:44,0:11:23.25:0,23,330	0/0:42,0:13:25.71:0,26,541	0/0:21,0:20:21.06:0,21,452	0/0:20,0:18:50.77:0,51,1406	0/0:33,0:34:67.18:0,67,2277	0/0:43,0:24:28.41:0,28,1207	0/0:40,0:40:99:0,108,2835	0/1:18,0:15:44.04:124,0,44	./.	0/0:45,0:45:99:0,126,3173	0/0:48,0:47:99:0,135,3255	0/0:45,0:45:99:0,132,3222	0/0:39,0:39:99:0,108,2678	0/0:50,0:50:99:0,135,3409	0/0:40,0:40:99:0,108,2763	1/1:7,8:13:31.69:499,32,0	0/0:44,0:34:90.21:0,90,2315	0/0:19,0:18:39.12:0,39,967	0/0:95,0:93:99:0,256,6373	0/0:28,0:28:51.16:0,51,1264	0/0:23,0:22:39.13:0,39,1007	0/0:60,0:60:99:0,159,4062	0/0:30,0:30:60.17:0,60,1604	0/0:52,0:49:99:0,135,3463	0/0:18,0:16:51.16:0,51,1316	0/0:12,0:12:33.10:0,33,782
chr10	69098283	.	AC	A	575.94	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=3.766;DP=991;FS=10.809;HRun=1;HaplotypeScore=142.4967;InbreedingCoeff=0.9165;MQ=53.36;MQ0=30;MQRankSum=1.514;QD=9.60;ReadPosRankSum=0.201;VQSLOD=0.3316;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,31:39:27.08:360,27,0	0/0:7,0:7:14.76:0,15,230	0/0:45,0:11:26.92:0,27,383	0/0:42,0:12:30.92:0,31,439	1/1:4,16:20:24.07:336,24,0	0/0:20,0:19:53.94:0,54,849	0/0:39,0:39:99:0,102,1541	0/0:36,0:27:71.94:0,72,984	0/0:39,0:39:99:0,111,1728	0/0:22,0:19:56.48:0,56,712	0/0:10,0:9:0:0,0,0	0/0:43,0:43:99:0,123,1960	0/0:49,0:48:99:0,144,2270	0/0:47,0:47:99:0,135,2072	0/0:39,0:39:99:0,111,1771	0/0:46,0:46:99:0,132,2036	0/0:39,0:39:99:0,111,1706	0/0:19,0:17:41.09:0,41,387	0/0:43,0:34:93.31:0,93,1466	0/0:18,0:17:39.13:0,39,609	0/0:92,0:89:99:0,250,3933	0/0:34,0:34:57.14:0,57,888	0/0:23,0:21:42.14:0,42,658	0/0:59,0:59:99:0,157,2493	0/0:29,0:29:60.16:0,60,929	0/0:55,0:52:99:0,151,2351	0/0:21,0:19:60.19:0,60,926	0/0:10,0:10:27.09:0,27,424
chr10	69098385	.	G	GAC	531.72	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.631;DP=1010;FS=8.504;HRun=0;HaplotypeScore=158.2289;InbreedingCoeff=0.9065;MQ=53.54;MQ0=20;MQRankSum=0.649;QD=8.44;ReadPosRankSum=0.208;VQSLOD=3.0215;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:33,16:48:27.07:429,27,0	0/0:17,0:17:48.16:0,48,655	0/0:30,0:1:3.01:0,3,41	0/0:29,0:7:16.29:0,16,138	1/1:8,6:13:17.97:222,18,0	0/0:22,0:22:51.11:0,51,662	0/0:33,0:33:81.25:0,81,1095	0/0:40,0:28:72.22:0,72,943	0/0:38,0:38:99:0,105,1403	0/0:47,0:45:99:0,111,1507	0/0:21,0:20:51.16:0,51,681	0/0:36,0:36:99:0,102,1400	0/0:32,0:32:93.31:0,93,1273	0/0:38,0:38:99:0,99,1377	0/0:49,0:49:99:0,135,1835	0/0:40,0:40:99:0,114,1526	0/0:35,0:35:93.21:0,93,1216	0/0:45,0:43:99:0,109,1460	0/0:25,0:16:42.11:0,42,529	0/0:23,0:22:57.16:0,57,747	0/0:116,0:115:99:0,301,3995	0/0:39,0:39:96.29:0,96,1280	0/0:24,0:24:69.23:0,69,931	0/0:69,0:69:99:0,157,2116	0/0:26,0:25:57.07:0,57,721	0/0:30,0:29:81.25:0,81,1085	0/0:27,0:27:69.15:0,69,880	0/0:16,0:16:47.64:0,48,625
chr10	69098417	.	GACAT	G	120.55	PASS	AB=0.976;AC=3;AF=0.054;AN=56;BaseQRankSum=6.196;DP=1012;FS=2.346;HRun=0;HaplotypeScore=182.6330;InbreedingCoeff=0.6080;MQ=57.16;MQ0=17;MQRankSum=-3.591;QD=2.19;ReadPosRankSum=-2.952;VQSLOD=2.3446;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:40,1:40:18.46:18,0,47	0/0:15,0:15:45.14:0,45,1154	0/0:43,0:9:15.57:0,16,442	0/0:30,0:10:8.87:0,9,328	0/0:11,0:9:0.47:0,0,1	0/0:22,0:22:52.03:0,52,1186	0/0:34,0:34:93.11:0,93,2355	1/1:11,3:13:20.82:205,21,0	0/0:37,0:37:99:0,105,2709	0/0:53,0:52:99:0,147,3692	0/0:26,0:26:72.25:0,72,1912	0/0:35,0:35:96.30:0,96,2464	0/0:36,0:36:96.24:0,96,2427	0/0:42,0:42:99:0,119,2937	0/0:45,0:45:99:0,120,3132	0/0:44,0:43:99:0,123,3078	0/0:39,0:39:79.87:0,80,2563	0/0:40,0:39:99:0,106,2711	0/0:25,0:21:54.18:0,54,1385	0/0:26,0:26:72.20:0,72,1710	0/0:125,0:124:99:0,334,8484	0/0:37,0:37:99:0,105,2682	0/0:27,0:27:78.25:0,78,1920	0/0:62,0:62:99:0,156,3919	0/0:32,0:31:74.71:0,75,1924	0/0:37,0:37:99:0,108,2847	0/0:18,0:18:48.15:0,48,1152	0/0:16,0:16:33.74:0,34,1103
chr10	69098499	.	G	GACAC	950.17	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=1.922;DP=1038;FS=9.194;HRun=0;HaplotypeScore=181.0630;InbreedingCoeff=0.7490;MQ=56.35;MQ0=25;MQRankSum=-0.115;QD=7.60;ReadPosRankSum=-1.320;VQSLOD=2.1336;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:20,25:46:44.66:867,45,0	0/0:14,0:14:29.84:0,30,506	0/1:53,0:17:44.50:44,0,152	0/0:59,0:27:33.93:0,34,332	1/1:6,16:22:8.77:162,9,0	0/0:19,0:19:48.06:0,48,627	0/0:36,0:38:78.20:0,78,1174	0/0:54,0:43:96.20:0,96,1431	0/0:34,0:34:75.21:0,75,1174	0/0:42,0:41:80.63:0,81,1401	0/0:20,0:21:48.13:0,48,735	0/0:49,0:50:99:0,129,1986	0/0:40,0:40:96.30:0,96,1556	0/0:39,0:39:74.05:0,74,1432	0/0:17,0:18:48.14:0,48,757	0/0:24,0:27:52.03:0,52,908	0/0:22,0:22:51.11:0,51,736	0/0:27,0:30:46.56:0,47,862	0/0:27,0:20:39.12:0,39,602	0/0:36,0:36:80.92:0,81,1212	0/0:130,0:132:99:0,315,4915	0/0:23,0:22:48.10:0,48,694	0/0:22,0:23:57.15:0,57,878	0/0:50,0:52:99:0,117,1808	0/0:28,0:28:63.17:0,63,972	0/0:42,0:42:99:0,102,1538	0/0:19,0:19:48.16:0,48,793	0/0:23,0:23:54.16:0,54,865
chr10	69098967	.	CT	C	966.12	PASS	AB=0.857;AC=5;AF=0.089;AN=56;BaseQRankSum=9.786;DP=498;FS=5.669;HRun=9;HaplotypeScore=49.6219;InbreedingCoeff=0.7171;MQ=68.67;MQ0=0;MQRankSum=-1.490;QD=18.58;ReadPosRankSum=0.640;VQSLOD=3.6184;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,24:27:69.02:631,69,0	0/0:7,0:7:21.05:0,21,233	0/1:5,1:6:24.67:25,0,77	0/0:7,0:6:9:0,9,84	1/1:3,16:19:48.02:439,48,0	0/0:12,0:12:30.09:0,30,346	0/0:17,0:17:42.12:0,42,485	0/0:31,0:31:75.20:0,75,847	0/0:14,0:14:15.12:0,15,391	0/0:27,0:27:72.20:0,72,816	0/0:24,0:24:60.17:0,60,684	0/0:9,0:9:21.06:0,21,242	0/0:9,0:9:24.05:0,24,265	0/0:16,0:16:48.14:0,48,554	0/0:13,1:14:5.63:0,6,319	0/0:21,0:21:57.16:0,57,649	0/0:28,0:28:78.23:0,78,900	0/0:21,0:21:51.10:0,51,565	0/0:23,0:23:57.17:0,57,658	0/0:21,0:21:57.17:0,57,658	0/0:15,0:15:42.12:0,42,485	0/0:23,0:23:66.14:0,66,736	0/0:15,0:15:42.11:0,42,474	0/0:16,0:16:42.12:0,42,484	0/0:23,0:23:57.17:0,57,658	0/0:11,0:11:30.09:0,30,346	0/0:20,0:20:48.14:0,48,554	0/0:22,0:22:66.14:0,66,720
chr10	69099280	.	AAAATC	A	2470.16	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.669;DP=519;FS=2.760;HRun=0;HaplotypeScore=96.6961;InbreedingCoeff=0.9977;MQ=86.75;MQ0=0;MQRankSum=-3.143;QD=38.60;ReadPosRankSum=-2.208;VQSLOD=2.9339;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,21:23:48.16:948,48,0	0/0:8,0:8:24.08:0,24,699	0/0:23,0:23:35.85:0,36,1309	0/0:13,0:12:31.60:0,32,813	1/1:4,13:17:33.11:661,33,0	0/0:18,0:18:48.16:0,48,1410	0/0:10,0:10:24.08:0,24,720	1/1:7,17:24:51.17:1005,51,0	0/0:18,0:18:54.17:0,54,1534	0/0:35,0:35:96.33:0,96,2772	0/0:25,0:25:69.22:0,69,1976	0/0:11,0:11:33.11:0,33,949	0/0:12,0:12:33.11:0,33,990	0/0:16,0:16:48.16:0,48,1438	0/0:16,0:16:45.15:0,45,1350	0/0:10,0:10:30.10:0,30,899	0/0:31,0:31:81.28:0,81,2410	0/0:14,0:14:42.14:0,42,1228	0/0:12,0:12:33.11:0,33,933	0/0:31,0:31:81.28:0,81,2357	0/0:14,0:14:36.12:0,36,1070	0/0:15,0:15:42.14:0,42,1231	0/0:22,0:22:63.22:0,63,1874	0/0:20,0:20:60.21:0,60,1790	0/0:23,0:23:57.19:0,57,1701	0/0:22,0:22:60.20:0,60,1735	0/0:16,0:16:45.15:0,45,1291	0/0:20,0:20:54.15:0,54,1486
chr10	69099360	.	CTG	C	1945.41	PASS	AB=0.928;AC=18;AF=0.321;AN=56;BaseQRankSum=11.703;DP=630;FS=4.353;HRun=0;HaplotypeScore=97.1938;InbreedingCoeff=0.4797;MQ=61.16;MQ0=3;MQRankSum=-0.193;QD=6.73;ReadPosRankSum=0.405;VQSLOD=3.1752;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:32:42.51:0,43,579	0/0:9,0:9:10.06:0,10,293	0/0:18,0:10:11.99:0,12,108	0/0:12,0:6:6.01:0,6,56	0/0:16,0:27:60.01:0,60,595	0/0:17,0:17:36.10:0,36,523	0/0:19,0:19:39.08:0,39,526	1/1:17,0:24:19.35:95,19,0	0/0:15,0:17:7.75:0,8,397	1/1:10,26:37:48.65:720,49,0	1/1:8,18:27:36.07:424,36,0	0/0:20,1:21:22.07:0,22,765	0/0:15,0:15:33.09:0,33,476	0/0:18,2:20:21.81:0,22,724	0/1:14,0:14:22.14:22,0,302	0/1:6,1:9:22.40:22,0,259	0/1:48,5:53:41.37:41,0,1519	1/1:7,16:23:22.13:438,22,0	0/1:23,1:23:34.34:34,0,372	0/0:27,0:27:22.02:0,22,733	0/0:25,2:26:12.80:0,13,607	0/1:18,1:19:14.76:15,0,525	1/1:5,0:19:22.73:112,23,0	1/1:5,0:27:42.61:210,43,0	0/0:15,0:17:4.79:0,5,373	0/0:38,2:40:30.47:0,30,1165	0/1:12,1:13:2.23:2,0,392	0/0:22,1:22:21.84:0,22,771
chr10	69100837	.	GTTGT	G	1815.20	PASS	AB=0.756;AC=10;AF=0.179;AN=56;BaseQRankSum=12.088;DP=690;FS=1.899;HRun=0;HaplotypeScore=126.2368;InbreedingCoeff=0.7693;MQ=67.20;MQ0=20;MQRankSum=1.128;QD=10.03;ReadPosRankSum=0.963;VQSLOD=3.2368;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,37:39:6.01:66,6,0	0/0:8,0:8:20.97:0,21,175	0/0:24,0:13:14.83:0,15,268	0/0:30,0:19:43.06:0,43,448	1/1:0,28:29:35.71:336,36,0	0/1:27,0:26:64.23:64,0,307	0/0:33,0:33:47.88:0,48,464	0/0:21,0:21:59.83:0,60,557	0/0:17,0:16:43.58:0,44,593	1/1:1,0:30:67.58:686,68,0	0/1:1,0:22:2.36:129,0,2	0/0:27,0:26:69.55:0,70,1073	0/0:24,0:24:71.08:0,71,1073	0/0:17,0:16:47.06:0,47,610	0/0:31,0:31:90.03:0,90,1203	0/0:21,0:21:62.07:0,62,939	0/0:26,0:25:14.86:0,15,347	1/1:29,0:32:90.81:698,91,0	0/0:17,0:16:47.97:0,48,472	0/0:15,0:15:25.20:0,25,476	0/0:28,0:25:50.87:0,51,508	0/0:23,0:23:69.03:0,69,965	0/0:17,0:15:15.70:0,16,110	0/0:54,0:54:55.54:0,56,776	0/0:22,0:21:62.91:0,63,724	0/0:19,0:18:54.06:0,54,742	0/0:16,0:16:44.85:0,45,535	0/0:19,0:19:49.77:0,50,428
chr10	69100838	.	TTG	T	784.18	PASS	AB=0.946;AC=26;AF=0.520;AN=50;BaseQRankSum=6.785;DP=699;FS=1.319;HRun=0;HaplotypeScore=111.5576;InbreedingCoeff=0.2356;MQ=66.68;MQ0=21;MQRankSum=0.082;QD=1.75;ReadPosRankSum=3.139;VQSLOD=2.0778;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:41,0:40:0.30:0,0,0	./.	./.	./.	1/1:29,0:29:4.86:27,5,0	1/1:22,1:27:10.35:128,10,0	1/1:22,0:34:5.01:29,5,0	0/0:21,0:21:5.98:0,6,49	0/1:16,0:15:47.23:47,0,117	1/1:30,0:30:9.62:99,10,0	1/1:22,0:22:2.80:13,3,0	0/1:27,0:26:28.04:28,0,315	0/0:23,0:23:24.28:0,24,375	0/1:16,1:16:51.94:52,0,107	0/0:30,0:30:9.84:0,10,327	0/0:21,0:21:23.75:0,24,315	0/1:20,0:26:5.79:19,0,6	1/1:34,0:33:3.80:161,4,0	0/0:18,0:17:8.98:0,9,92	0/1:12,2:15:28.71:29,0,113	0/0:26,6:28:6.01:0,6,72	0/1:23,0:23:6.28:6,0,256	0/1:17,0:15:0.07:0,0,0	1/1:26,26:54:26.74:256,27,0	0/0:23,0:22:14.72:0,15,181	0/0:20,0:18:18:0,18,212	0/1:17,0:17:17.29:17,0,117	1/1:18,0:18:3.01:33,3,0
chr10	69101385	.	GCT	G	2763.99	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=10.217;DP=712;FS=5.172;HRun=0;HaplotypeScore=84.2681;InbreedingCoeff=0.9988;MQ=76.04;MQ0=0;MQRankSum=-3.325;QD=36.37;ReadPosRankSum=1.562;VQSLOD=5.9944;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,48:49:99:1855,126,0	0/0:8,0:8:24.08:0,24,446	0/0:18,0:18:52.97:0,53,798	0/0:14,0:14:33.05:0,33,526	1/1:0,27:27:75.12:1031,75,0	0/0:23,0:23:69.24:0,69,1284	0/0:27,0:27:81.26:0,81,1476	0/0:32,0:32:93.28:0,93,1585	0/0:26,0:26:78.24:0,78,1388	0/0:19,0:19:57.07:0,57,954	0/0:25,0:25:75.24:0,75,1338	0/0:27,0:27:81.28:0,81,1507	0/0:28,0:28:81.26:0,81,1457	0/0:26,0:26:78.24:0,78,1376	0/0:35,0:35:99:0,105,1916	0/0:27,0:27:75.23:0,75,1328	0/0:32,0:32:96.29:0,96,1705	0/0:21,0:21:63.15:0,63,1103	0/0:24,0:24:72.19:0,72,1203	0/0:32,0:32:93.30:0,93,1698	0/0:31,0:31:84.26:0,84,1489	0/0:27,0:27:80.93:0,81,1395	0/0:18,0:18:54.17:0,54,967	0/0:25,0:25:75.26:0,75,1395	0/0:21,0:21:63.20:0,63,1134	0/0:30,0:30:87.28:0,87,1556	0/0:26,0:26:72.23:0,72,1298	0/0:14,0:14:39.01:0,39,651
chr10	69102430	.	TG	T	3870.32	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=11.335;DP=683;FS=14.312;HRun=7;HaplotypeScore=72.3389;InbreedingCoeff=0.9999;MQ=92.34;MQ0=0;MQRankSum=-1.742;QD=25.46;ReadPosRankSum=0.986;VQSLOD=2.9917;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,45:48:99:1316,114,0	0/0:16,0:16:42.12:0,42,515	0/0:30,0:29:55.10:0,55,691	0/0:43,0:43:56.37:0,56,929	1/1:2,21:23:55.92:579,56,0	0/0:26,0:26:75.24:0,75,941	0/0:25,0:25:69.21:0,69,853	1/1:4,24:28:69.11:691,69,0	0/0:19,0:19:51.16:0,51,640	1/1:7,17:24:48.10:489,48,0	1/1:0,14:14:39.09:398,39,0	0/0:20,0:20:57.17:0,57,700	0/0:17,0:17:45.13:0,45,552	0/0:18,0:18:48.14:0,48,589	0/0:25,0:25:75.24:0,75,940	0/0:21,0:21:60.19:0,60,755	0/0:33,0:33:96.31:0,96,1202	1/1:2,13:15:39.09:398,39,0	0/0:22,0:22:57.18:0,57,714	0/0:24,0:24:63.19:0,63,777	0/0:44,0:44:99:0,123,1542	0/0:24,0:24:69.21:0,69,851	0/0:14,0:14:36.11:0,36,439	0/0:23,0:23:57.18:0,57,713	0/0:22,0:22:63.18:0,63,767	0/0:29,0:29:81.26:0,81,1018	0/0:19,0:19:51.16:0,51,638	0/0:17,0:17:48.15:0,48,604
chr10	69103299	.	C	CAA	2248.25	PASS	AB=0.615;AC=11;AF=0.196;AN=56;BaseQRankSum=-0.098;DP=512;FS=0.899;HRun=11;HaplotypeScore=69.6679;InbreedingCoeff=0.8522;MQ=69.71;MQ0=0;MQRankSum=-1.166;QD=17.29;ReadPosRankSum=-2.174;VQSLOD=2.0718;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,19:21:45.15:652,45,0	0/0:4,0:5:14.76:0,15,128	0/0:22,0:15:4.05:0,4,195	0/0:14,0:12:20.68:0,21,174	1/1:6,24:33:74.59:968,75,0	0/0:19,0:19:53.79:0,54,506	0/0:17,0:18:38.81:0,39,361	1/1:6,2:21:24.93:163,25,0	0/0:20,0:23:32.84:0,33,419	0/1:9,0:24:20.69:85,0,21	1/1:2,0:16:30.89:125,31,0	0/0:13,0:13:29.99:0,30,291	0/0:16,0:16:35.96:0,36,347	0/0:12,0:12:33.02:0,33,320	0/0:18,0:19:50.79:0,51,477	0/0:11,0:13:26.74:0,27,245	0/0:22,0:22:57.03:0,57,553	1/1:3,12:15:30.10:435,30,0	0/0:16,0:17:41.57:0,42,374	0/0:29,0:30:68.79:0,69,652	0/0:10,0:10:27.02:0,27,256	0/0:14,0:14:32.99:0,33,316	0/0:22,0:24:37.45:0,37,539	0/0:16,0:16:42:0,42,400	0/0:9,0:11:32.53:0,33,286	0/0:20,0:23:47.94:0,48,511	0/0:21,0:22:50.76:0,51,477	0/0:16,0:17:20.32:0,20,340
chr10	69105288	.	A	ATT	1752.39	PASS	AB=0.792;AC=10;AF=0.179;AN=56;BaseQRankSum=8.685;DP=365;FS=88.449;HRun=0;HaplotypeScore=57.2280;InbreedingCoeff=-0.2273;MQ=55.26;MQ0=1;MQRankSum=-9.599;QD=11.09;ReadPosRankSum=3.145;VQSLOD=-0.1614;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:75.26:0,75,1212	0/1:4,2:6:94.95:95,0,177	0/0:7,0:6:14.56:0,15,244	0/0:12,0:12:36.09:0,36,521	0/1:15,7:22:99:266,0,560	0/0:13,0:13:39.12:0,39,611	0/0:13,0:13:39.13:0,39,635	0/0:16,0:16:42.14:0,42,664	0/0:12,0:12:30.08:0,30,462	0/1:17,3:20:99:114,0,771	0/1:15,5:20:99:229,0,536	0/0:10,0:10:27.09:0,27,441	0/0:4,0:4:12.04:0,12,196	0/0:6,0:6:15.05:0,15,245	0/0:5,0:5:12.04:0,12,196	0/0:3,0:3:9.03:0,9,147	0/0:22,0:22:63.18:0,63,965	0/0:17,0:17:45.15:0,45,731	0/0:16,0:15:45.15:0,45,734	0/1:14,5:19:99:231,0,523	0/0:13,0:13:39.13:0,39,621	0/0:4,0:4:12.04:0,12,196	0/1:11,9:20:99:433,0,385	0/0:7,0:7:18.06:0,18,293	0/1:13,3:15:99:121,0,576	0/1:14,2:16:67.60:68,0,637	0/1:8,1:9:29.42:29,0,352	0/1:4,6:10:99:311,0,166
chr10	69105339	.	GC	G	3852.95	PASS	AC=52;AF=0.929;AN=56;BaseQRankSum=-2.364;DP=162;FS=0.000;HRun=4;HaplotypeScore=22.7190;InbreedingCoeff=0.3746;MQ=43.85;MQ0=0;MQRankSum=-1.637;QD=24.70;ReadPosRankSum=-1.765;VQSLOD=1.6166;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,13:15:33.09:387,33,0	1/1:1,1:2:3.01:36,3,0	0/0:2,0:1:3.01:0,3,42	0/0:4,0:1:3.01:0,3,42	1/1:0,5:5:12.03:136,12,0	1/1:0,1:1:3.01:33,3,0	1/1:2,2:4:6.02:72,6,0	1/1:0,7:7:20.98:215,21,0	1/1:0,7:7:18.05:207,18,0	1/1:0,6:6:18.05:215,18,0	1/1:0,5:5:6.49:65,6,0	1/1:0,5:4:6.02:66,6,0	1/1:0,4:4:12.03:130,12,0	1/1:0,6:6:15.04:170,15,0	1/1:0,4:4:9.02:101,9,0	1/1:0,4:4:12.04:144,12,0	1/1:0,5:5:9.03:108,9,0	1/1:1,7:8:12.04:144,12,0	1/1:1,9:10:27.08:320,27,0	1/1:0,9:9:18.99:201,19,0	1/1:0,3:3:9.03:108,9,0	1/1:0,8:8:15.04:164,15,0	1/1:1,8:9:12.31:105,12,0	1/1:1,3:4:3.01:36,3,0	1/1:1,6:7:15.04:171,15,0	1/1:0,8:8:21.06:250,21,0	1/1:0,9:8:21.06:235,21,0	1/1:0,1:1:3.01:34,3,0
chr10	69106406	.	AGT	A	964.23	PASS	AB=0.857;AC=20;AF=0.385;AN=52;BaseQRankSum=10.641;DP=853;FS=4.026;HRun=0;HaplotypeScore=127.0257;InbreedingCoeff=-0.3175;MQ=56.74;MQ0=12;MQRankSum=2.790;QD=1.69;ReadPosRankSum=3.905;VQSLOD=1.8683;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:16,0:52:19.66:98,20,0	0/1:14,2:16:71.29:71,0,248	./.	./.	1/1:1,0:12:5.64:28,6,0	0/1:29,5:34:35.37:35,0,574	0/1:32,13:47:97.95:98,0,952	0/0:29,0:29:31.02:0,31,223	0/1:30,3:33:23.47:23,0,989	0/1:34,6:39:99:108,0,612	0/1:14,1:14:31.05:31,0,358	0/1:30,11:42:99:211,0,703	0/0:29,1:30:22.25:0,22,739	0/0:23,0:23:19.44:0,19,714	0/1:27,10:37:93.26:93,0,601	0/1:23,5:28:33.65:34,0,585	0/1:21,1:22:1.74:2,0,388	0/0:22,3:25:21.15:0,21,718	0/1:18,0:16:27.34:27,0,37	0/0:21,0:21:38.94:0,39,568	0/1:67,14:84:99:137,0,1605	0/1:31,6:37:12.43:12,0,714	0/0:18,0:17:16.34:0,16,292	0/0:42,6:48:9.91:0,10,1444	0/1:10,6:16:16.76:17,0,215	0/1:27,2:31:38.90:39,0,792	0/0:29,4:34:5.32:0,5,913	0/1:5,2:7:57.58:58,0,64
chr10	69107501	.	C	CATTTGTTCAGCTATATGTGATAA	3645.81	PASS	AB=0.690;AC=40;AF=0.952;AN=42;BaseQRankSum=-3.301;DP=55;FS=11.566;HRun=0;HaplotypeScore=36.9592;InbreedingCoeff=-0.2105;MQ=133.81;MQ0=0;MQRankSum=-2.058;QD=68.79;ReadPosRankSum=0.427;VQSLOD=0.9819;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,0:3:3.01:73,3,0	1/1:2,0:2:3.01:39,3,0	0/1:5,1:10:83.83:1205,0,84	0/1:3,0:5:24.87:426,0,25	1/1:2,0:3:3.01:117,3,0	./.	./.	1/1:2,0:2:6.02:161,6,0	./.	1/1:3,0:3:6.02:143,6,0	1/1:1,0:1:3.01:79,3,0	1/1:0,0:1:3.01:120,3,0	1/1:1,0:2:3.01:119,3,0	./.	1/1:1,0:3:9.02:265,9,0	1/1:1,0:1:3.01:50,3,0	1/1:2,0:2:6.02:126,6,0	./.	1/1:4,0:4:9.03:182,9,0	1/1:1,0:1:2.97:20,3,0	1/1:2,0:2:3.01:83,3,0	./.	1/1:1,0:1:3.01:74,3,0	1/1:1,0:1:3.01:72,3,0	1/1:3,0:3:6.02:125,6,0	1/1:1,0:1:3.01:93,3,0	1/1:2,0:2:3.01:74,3,0	./.
chr10	69108387	.	A	ATG	265.12	PASS	AB=0.979;AC=11;AF=0.212;AN=52;BaseQRankSum=5.397;DP=708;FS=4.270;HRun=0;HaplotypeScore=221.4909;InbreedingCoeff=-0.1917;MQ=32.96;MQ0=19;MQRankSum=-5.995;QD=1.10;ReadPosRankSum=2.404;VQSLOD=1.9476;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:0.93:0,1,3	0/1:13,0:12:12.67:13,0,90	./.	./.	1/1:15,0:15:0.47:1,0,0	0/0:10,0:10:1.67:0,2,36	0/0:38,0:35:30.94:0,31,302	0/0:55,0:29:10.82:0,11,409	0/1:31,0:29:48.13:48,0,68	0/1:37,0:31:92.47:92,0,399	0/0:18,0:17:2.78:0,3,38	0/0:29,0:27:9.37:0,9,80	0/1:30,0:29:31.51:32,0,166	0/1:36,1:37:58.44:77,0,58	0/0:46,0:44:1.10:0,1,164	0/1:32,0:32:3.85:4,0,66	0/1:25,0:24:3.58:4,0,245	0/0:21,0:20:9.87:0,10,173	0/0:17,0:8:11.44:0,11,129	0/0:21,0:21:10.86:0,11,117	0/0:63,1:57:27.40:0,27,260	0/0:24,0:21:2.17:0,2,106	0/0:23,1:22:5.62:0,6,77	0/0:33,0:32:8.98:0,9,83	0/0:23,0:21:16.58:0,17,217	0/0:29,0:25:22.46:0,22,388	0/1:16,0:16:47.84:48,0,99	0/1:4,1:5:68.39:70,0,68
chr10	69108473	.	ATG	A	1597.47	PASS	AB=0.899;AC=19;AF=0.339;AN=56;BaseQRankSum=12.012;DP=1513;FS=26.511;HRun=0;HaplotypeScore=353.4823;InbreedingCoeff=-0.3089;MQ=39.74;MQ0=53;MQRankSum=-7.701;QD=1.63;ReadPosRankSum=2.028;VQSLOD=0.7383;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:17,1:23:2.37:8,2,0	0/1:22,2:23:23.03:23,0,207	0/0:39,3:12:0.94:0,1,105	0/1:38,8:16:83.30:83,0,87	1/1:28,4:36:4.69:48,5,0	0/0:22,4:25:48.11:0,48,764	0/1:65,5:66:35.61:36,0,1024	0/1:104,0:70:62.50:62,0,635	0/1:36,3:39:26.52:27,0,646	0/1:63,26:82:99:821,0,1111	0/1:26,13:38:20.55:21,0,207	0/0:47,3:47:28.82:0,29,1231	0/1:36,3:38:9.11:9,0,929	0/0:47,7:52:54.12:0,54,830	0/0:41,9:50:21.03:0,21,912	0/0:41,2:42:9.15:0,9,694	0/1:51,5:55:57.29:57,0,1158	0/1:37,4:39:84:84,0,946	0/1:46,2:26:99:105,0,524	0/1:59,5:61:99:127,0,1281	0/1:150,24:160:25.81:26,0,3070	0/0:55,2:48:30.01:0,30,464	0/0:45,5:46:9.74:0,10,667	0/0:68,9:75:63.20:0,63,1427	0/0:60,6:60:20.51:0,21,901	0/1:60,7:60:99:176,0,1257	0/0:18,2:20:2.52:0,3,486	0/1:15,2:16:42.57:43,0,484
chr10	69108521	.	G	GTGTA	968.71	PASS	AB=0.981;AC=13;AF=0.232;AN=56;BaseQRankSum=10.099;DP=1252;FS=38.352;HRun=0;HaplotypeScore=319.6815;InbreedingCoeff=0.0517;MQ=41.87;MQ0=47;MQRankSum=-6.798;QD=2.51;ReadPosRankSum=-2.912;VQSLOD=1.1868;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:22:2.62:13,3,0	0/1:12,0:11:5.78:6,0,148	0/0:29,0:10:24.05:0,24,377	0/0:43,0:16:42.10:0,42,712	0/1:30,0:29:15.16:15,0,29	0/0:21,0:21:34.05:0,34,589	0/0:56,1:53:91.17:0,91,1451	0/1:81,0:45:69.60:103,0,70	0/1:35,1:36:41.44:41,0,685	0/1:62,2:58:99:551,0,175	1/1:28,0:27:10.33:56,10,0	0/0:46,1:44:75.68:0,76,1247	0/0:35,0:34:32.37:0,32,1009	0/0:48,1:48:72.19:0,72,1186	0/0:43,1:44:62.45:0,62,1049	0/1:32,2:34:11.30:11,0,751	0/0:48,0:48:85.78:0,86,1559	0/1:30,1:30:72.20:289,0,72	0/1:37,1:24:7.21:7,0,699	0/0:48,0:46:53.86:0,54,969	0/0:159,1:152:99:0,226,4389	0/0:43,0:39:42.09:0,42,713	0/0:33,0:32:44.86:0,45,741	0/0:73,0:72:99:0,124,2581	0/0:44,0:42:35.73:0,36,649	0/0:71,2:66:20.25:0,20,2270	0/0:18,0:18:22.89:0,23,627	0/1:8,0:8:26.92:27,0,261
chr10	69108523	.	G	GTA	863.87	PASS	AB=0.966;AC=9;AF=0.161;AN=56;BaseQRankSum=9.438;DP=1233;FS=23.062;HRun=0;HaplotypeScore=280.4117;InbreedingCoeff=0.0373;MQ=41.99;MQ0=45;MQRankSum=-5.492;QD=3.03;ReadPosRankSum=-5.008;VQSLOD=0.5224;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:19,3:22:2.53:0,3,11	0/1:13,0:12:4.33:4,0,134	0/0:29,0:10:27:0,27,357	0/0:42,0:16:45.04:0,45,630	0/1:20,8:27:36.62:52,0,37	0/0:20,0:20:27.86:0,28,476	0/0:56,0:52:93.69:0,94,1276	0/1:72,1:44:80.94:316,0,81	0/1:37,0:37:37.37:37,0,566	0/1:66,0:59:99:256,0,442	1/1:28,0:27:10.38:59,10,0	0/0:46,0:43:78.06:0,78,1077	0/0:36,0:35:47.33:0,47,868	0/0:49,0:48:75.02:0,75,1018	0/0:44,0:44:65.60:0,66,914	0/0:34,0:34:0.54:0,1,633	0/0:48,0:48:96.75:0,97,1313	0/1:32,0:31:99:252,0,181	0/0:38,0:24:23.41:0,23,652	0/0:47,0:45:53.86:0,54,823	0/0:159,0:150:99:0,230,3761	0/0:41,0:37:42.11:0,42,598	0/0:33,0:32:45.08:0,45,609	0/0:71,0:70:99:0,124,2102	0/0:43,0:41:36.06:0,36,528	0/0:71,0:64:96.84:0,97,2032	0/0:17,0:17:23.13:0,23,553	0/1:8,0:8:26.92:27,0,202
chr10	69108534	.	TGA	T	678.24	PASS	AB=0.971;AC=7;AF=0.125;AN=56;BaseQRankSum=11.105;DP=1152;FS=8.741;HRun=0;HaplotypeScore=252.2508;InbreedingCoeff=0.2064;MQ=43.37;MQ0=33;MQRankSum=-5.611;QD=3.11;ReadPosRankSum=-6.043;VQSLOD=0.1876;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:24:3.45:19,0,3	0/0:13,0:12:5.05:0,5,211	0/0:33,0:12:20.72:0,21,442	0/0:48,0:19:20.87:0,21,647	0/1:28,2:28:10.64:36,0,11	0/0:19,0:19:35.83:0,36,626	0/0:55,0:52:92.09:0,92,1409	0/1:55,1:36:99:197,0,127	0/0:38,0:38:41.40:0,41,753	0/1:59,0:55:99:352,0,200	1/1:21,0:20:5.29:40,5,0	0/0:46,0:45:79.42:0,79,1295	0/0:38,1:38:40.69:0,41,974	0/0:47,0:47:46.42:0,46,1115	0/0:44,0:44:62.91:0,63,1032	0/0:33,0:33:43.96:0,44,804	0/0:44,0:44:39.04:0,39,1483	0/1:26,1:27:37.98:162,0,38	0/0:35,0:23:49.24:0,49,725	0/0:36,0:36:50.29:0,50,733	0/0:139,1:138:99:0,255,4360	0/0:33,0:29:39.11:0,39,682	0/0:31,0:31:31.71:0,32,633	0/0:71,0:70:99:0,144,2632	0/0:34,0:32:33.06:0,33,593	0/0:70,0:65:80.81:0,81,2306	0/0:17,0:17:38.94:0,39,664	0/0:6,0:6:15.01:0,15,250
chr10	69108855	.	CCT	C	234.18	PASS	AB=0.903;AC=11;AF=0.196;AN=56;BaseQRankSum=4.752;DP=636;FS=8.909;HRun=0;HaplotypeScore=90.5483;InbreedingCoeff=-0.1789;MQ=75.46;MQ0=9;MQRankSum=0.970;QD=0.91;ReadPosRankSum=1.957;VQSLOD=0.9340;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:26:2.41:0,2,20	0/0:5,0:5:6.02:0,6,93	0/1:45,0:24:0:0,0,0	0/0:40,0:19:3:0,3,45	0/0:20,0:20:2.96:0,3,24	0/0:25,0:26:10.43:0,10,569	0/1:18,1:21:20.49:20,0,388	0/0:38,0:35:29.88:0,30,249	0/0:19,0:19:5.89:0,6,498	0/0:22,0:21:17.92:0,18,168	0/0:8,0:7:0:0,0,0	0/1:20,3:23:10.26:10,0,296	0/1:22,0:22:3.39:3,0,527	0/1:22,0:24:12.39:12,0,422	0/0:18,0:18:4.75:0,5,341	0/1:15,4:19:60.88:61,0,464	0/0:38,1:40:35.75:0,36,1080	0/0:12,0:11:11.99:0,12,120	0/1:11,1:12:20.64:28,0,21	0/1:24,0:24:3.37:3,0,505	0/1:24,4:29:91.36:91,0,579	0/0:21,0:21:36.11:0,36,533	0/0:19,0:20:24.04:0,24,302	0/0:25,1:27:17.73:0,18,872	0/1:11,5:17:99:121,0,198	0/0:20,0:20:34.28:0,34,420	0/1:18,0:19:9.40:9,0,440	0/0:16,0:13:3.64:0,4,412
chr10	69109344	.	GT	G	313.51	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.124;DP=503;FS=0.945;HRun=1;HaplotypeScore=55.4136;InbreedingCoeff=0.9381;MQ=95.15;MQ0=0;MQRankSum=-6.632;QD=16.50;ReadPosRankSum=-1.326;VQSLOD=3.2800;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,111,1769	0/0:9,0:9:27.09:0,27,431	0/0:31,0:31:93.24:0,93,1413	0/0:16,0:16:45.15:0,45,684	0/0:10,0:10:27.09:0,27,429	0/0:21,0:21:63.21:0,63,995	0/0:16,0:16:48.16:0,48,765	1/1:1,18:19:53.70:408,54,0	0/0:16,0:16:48.16:0,48,765	0/0:10,0:10:30.10:0,30,478	0/0:7,0:7:21.07:0,21,336	0/0:19,0:19:57.19:0,57,905	0/0:16,0:16:45.12:0,45,657	0/0:17,0:17:51.17:0,51,811	0/0:22,0:22:66.23:0,66,1052	0/0:22,0:22:63.21:0,63,1006	0/0:28,0:28:84.27:0,84,1317	0/0:26,0:26:78.22:0,78,1215	0/0:25,0:25:74.62:0,75,1153	0/0:10,0:10:27.08:0,27,392	0/0:30,0:30:84.27:0,84,1315	0/0:16,0:16:48.10:0,48,711	0/0:11,0:11:33.09:0,33,500	0/0:23,0:23:69.22:0,69,1076	0/0:14,0:14:42.14:0,42,668	0/0:16,0:16:48.16:0,48,767	0/0:12,0:11:36.09:0,36,548	0/0:3,0:3:9.03:0,9,144
chr10	69109346	.	AGG	A	405.57	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.974;DP=495;FS=2.087;HRun=2;HaplotypeScore=64.0344;InbreedingCoeff=0.9382;MQ=94.25;MQ0=0;MQRankSum=-6.866;QD=22.53;ReadPosRankSum=-0.841;VQSLOD=1.6075;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,108,2149	0/0:9,0:9:27.09:0,27,549	0/0:30,0:30:90.31:0,90,1791	0/0:15,0:15:45.15:0,45,890	0/0:10,0:10:30.10:0,30,609	0/0:22,0:22:63.20:0,63,1228	0/0:16,0:16:48.16:0,48,975	1/1:0,18:18:51.08:500,51,0	0/0:16,0:16:48.16:0,48,975	0/0:10,0:10:30.10:0,30,604	0/0:7,0:7:21.07:0,21,427	0/0:18,0:18:54.17:0,54,1046	0/0:12,0:12:36.12:0,36,731	0/0:16,0:16:48.16:0,48,975	0/0:23,0:23:69.24:0,69,1402	0/0:21,0:21:63.22:0,63,1271	0/0:28,0:28:84.29:0,84,1695	0/0:28,0:28:81.28:0,81,1644	0/0:24,0:25:72.25:0,72,1436	0/0:9,0:9:27.08:0,27,512	0/0:30,0:30:84.27:0,84,1658	0/0:16,0:16:48.16:0,48,957	0/0:10,0:10:30.10:0,30,598	0/0:23,0:23:69.24:0,69,1383	0/0:14,0:14:42.14:0,42,851	0/0:16,0:16:48.16:0,48,971	0/0:12,0:11:36.12:0,36,730	0/0:3,0:3:9.03:0,9,183
chr10	69109491	.	A	AGGAAAAG	2189.44	PASS	AC=12;AF=0.222;AN=54;BaseQRankSum=-0.781;DP=431;FS=1.549;HRun=0;HaplotypeScore=88.0479;InbreedingCoeff=0.8439;MQ=78.09;MQ0=8;MQRankSum=-4.582;QD=32.68;ReadPosRankSum=-3.063;VQSLOD=2.8752;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,10:13:14.79:429,15,0	0/0:4,0:4:9.02:0,9,167	0/0:80,0:39:7.24:0,7,274	0/0:88,0:42:18.34:0,18,298	1/1:6,13:19:23.88:507,24,0	0/0:10,0:10:21.06:0,21,446	0/0:8,0:8:21.04:0,21,382	1/1:13,0:12:5.93:40,6,0	0/0:9,0:9:15.04:0,15,308	1/1:1,9:10:27.03:826,27,0	1/1:2,4:6:9.03:333,9,0	0/0:6,0:6:9.02:0,9,167	0/0:8,0:8:17.95:0,18,350	0/0:10,0:10:21.03:0,21,399	0/0:9,0:9:21.07:0,21,492	0/0:8,0:8:18.06:0,18,421	0/0:9,0:9:6.01:0,6,96	1/1:4,2:6:6.02:224,6,0	0/0:11,0:11:6.02:0,6,140	0/0:12,0:12:30.09:0,30,637	0/0:12,0:12:24.08:0,24,562	0/0:18,0:18:33.10:0,33,729	0/0:13,0:13:18.06:0,18,405	0/0:10,0:10:21.05:0,21,423	0/0:8,0:8:18.06:0,18,405	0/0:13,0:13:33.11:0,33,773	0/0:10,0:10:24.08:0,24,537	./.
chr10	69109581	.	C	CCAT	197.87	PASS	AB=1.000;AC=9;AF=0.188;AN=48;BaseQRankSum=2.159;DP=138;FS=19.570;HRun=0;HaplotypeScore=26.7320;InbreedingCoeff=0.1797;MQ=83.19;MQ0=19;MQRankSum=0.989;QD=7.61;ReadPosRankSum=-1.065;VQSLOD=0.5814;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:7,0:6:23.15:46,0,23	./.	0/0:28,0:10:7.54:0,8,193	0/0:33,0:11:10.83:0,11,184	0/1:4,0:2:4.82:49,0,5	0/0:2,0:2:6.02:0,6,104	0/0:9,0:9:27.08:0,27,428	1/1:3,4:7:12.02:153,12,0	0/0:2,0:1:1.55:0,2,4	1/1:2,0:2:3.01:58,3,0	0/0:2,0:2:2.44:0,2,35	0/0:2,0:2:5.97:0,6,64	0/0:1,0:1:3.01:0,3,52	0/0:5,0:3:6.02:0,6,105	0/0:3,0:2:2.60:0,3,52	./.	0/1:3,0:2:6.53:7,0,47	1/1:2,0:1:0.47:1,0,0	0/0:3,0:3:6.02:0,6,105	0/0:3,0:3:9.02:0,9,122	0/0:6,0:2:3.01:0,3,52	./.	./.	0/0:3,0:3:3.01:0,3,45	0/0:1,0:1:3.01:0,3,52	0/0:2,0:2:6.02:0,6,97	0/0:3,0:2:6:0,6,50	0/0:1,0:1:3.01:0,3,52
chr10	69112457	.	ATGTGTGTGTGTGTGTGTGTGTGTG	A	1923.05	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=4.746;DP=695;FS=2.525;HRun=0;HaplotypeScore=368.5947;InbreedingCoeff=0.9836;MQ=63.37;MQ0=13;MQRankSum=-4.946;QD=53.42;ReadPosRankSum=0.355;VQSLOD=1.7890;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:47:36.59:0,37,2346	0/0:16,0:16:39.09:0,39,3616	0/0:31,0:19:30.10:0,30,1360	0/0:31,0:20:27.08:0,27,1023	0/0:19,0:19:18.06:0,18,1351	0/0:19,0:21:51.14:0,51,3325	0/0:17,0:18:33.11:0,33,3379	0/0:32,0:32:69.24:0,69,4945	0/0:16,0:16:42.14:0,42,3586	0/0:22,0:22:45.15:0,45,3414	0/0:16,0:15:24.07:0,24,1682	0/0:20,0:19:38.60:0,39,3527	0/0:21,0:22:54.19:0,54,4927	0/0:20,0:22:38.59:0,39,2933	0/0:28,0:30:72.22:0,72,6086	0/0:20,0:21:55.07:0,55,4658	0/0:41,0:40:84.29:0,84,7683	0/0:17,0:17:33.08:0,33,1948	0/0:24,0:24:54.64:0,55,3045	0/0:13,0:13:27.98:0,28,2417	0/0:55,0:54:99:0,138,11194	0/0:26,0:30:69.24:0,69,5856	1/1:10,8:18:18.53:1084,19,0	1/1:8,10:17:16.61:956,17,0	0/0:20,0:23:45.15:0,45,3280	0/0:18,0:18:45.15:0,45,3503	0/0:25,0:27:63.22:0,63,5340	0/0:24,0:25:54.19:0,54,4571
chr10	69113852	.	TCCCC	T	3899.55	PASS	AB=0.974;AC=11;AF=0.196;AN=56;BaseQRankSum=10.538;DP=596;FS=15.585;HRun=9;HaplotypeScore=111.0855;InbreedingCoeff=0.8860;MQ=72.04;MQ0=8;MQRankSum=-6.902;QD=25.49;ReadPosRankSum=3.720;VQSLOD=0.4812;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,25:34:66.21:1097,66,0	0/0:7,0:7:21.07:0,21,529	0/0:69,0:28:45.09:0,45,1223	0/0:56,0:25:57.73:0,58,1157	1/1:2,16:19:45.15:739,45,0	0/0:13,0:13:39.13:0,39,1015	0/0:23,0:23:54.19:0,54,1334	0/1:37,0:38:23.27:303,0,23	0/0:14,0:14:42.14:0,42,1056	1/1:0,19:19:51.12:813,51,0	1/1:1,13:14:39.13:650,39,0	0/0:13,0:13:33.58:0,34,848	0/0:14,0:14:39.13:0,39,1005	0/0:12,0:13:36.10:0,36,825	0/0:15,0:15:45.14:0,45,1084	0/0:19,0:19:54.19:0,54,1335	0/0:17,0:17:48.15:0,48,1151	1/1:28,0:29:37.30:298,37,0	0/0:19,0:19:42.13:0,42,1019	0/0:14,0:14:42.13:0,42,982	0/0:22,0:22:60.20:0,60,1457	0/0:11,0:11:27.09:0,27,698	0/0:16,0:16:48.15:0,48,1167	0/0:18,0:18:45.15:0,45,1084	0/0:13,0:13:39.13:0,39,928	0/0:23,0:22:57.20:0,57,1437	0/0:20,0:18:57.18:0,57,1426	0/0:13,0:13:27.09:0,27,666
chr10	69113858	.	CCCCTT	C	3010.07	PASS	AB=1.000;AC=8;AF=0.143;AN=56;BaseQRankSum=6.663;DP=583;FS=10.223;HRun=0;HaplotypeScore=123.2131;InbreedingCoeff=0.4204;MQ=72.54;MQ0=7;MQRankSum=-7.339;QD=21.66;ReadPosRankSum=-0.997;VQSLOD=2.5215;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:30:99:100,0,131	0/0:11,0:11:33.11:0,33,781	0/0:75,0:31:75.91:0,76,1373	0/0:56,0:25:65.56:0,66,1130	0/1:17,0:17:16.92:181,0,17	0/0:14,0:14:42.14:0,42,1223	0/0:20,0:20:60.19:0,60,1622	1/1:2,30:32:87.26:1537,87,0	0/0:14,0:14:42.14:0,42,1208	0/1:19,0:18:35.94:36,0,81	0/1:14,0:14:74.11:116,0,74	0/0:14,0:14:41.17:0,41,1105	0/0:15,0:15:42.14:0,42,1231	0/0:12,0:12:33.10:0,33,877	0/0:14,0:14:42.14:0,42,1214	0/0:20,0:20:57.20:0,57,1658	0/0:15,0:15:45.13:0,45,1331	1/1:1,26:27:57.19:1189,57,0	0/0:15,0:15:45.15:0,45,1240	0/0:16,0:16:45.15:0,45,1153	0/0:23,0:23:66.22:0,66,1710	0/0:11,0:11:30.10:0,30,907	0/0:17,0:17:48.16:0,48,1401	0/0:17,0:17:48.13:0,48,1200	0/0:14,0:14:42.13:0,42,1105	0/0:22,0:21:63.21:0,63,1634	0/0:20,0:18:60.21:0,60,1798	0/0:9,0:9:27.09:0,27,845
chr10	69113861	.	CT	C	213.23	PASS	AB=0.900;AC=5;AF=0.089;AN=56;BaseQRankSum=9.120;DP=590;FS=1.111;HRun=10;HaplotypeScore=95.4406;InbreedingCoeff=0.7846;MQ=72.92;MQ0=7;MQRankSum=-4.686;QD=2.77;ReadPosRankSum=-1.201;VQSLOD=-0.2677;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:35.35:0,35,259	0/0:12,0:12:28.54:0,29,249	0/0:76,2:33:11.86:0,12,286	0/0:55,0:24:28.37:0,28,211	0/0:18,0:18:22.88:0,23,137	0/0:17,0:17:45.02:0,45,443	0/0:19,0:19:51.06:0,51,511	1/1:32,0:32:57.24:202,57,0	0/0:16,0:16:38.89:0,39,379	0/0:19,0:18:21.44:0,21,213	0/0:14,0:14:25.72:0,26,155	0/0:16,1:17:19.42:0,19,362	0/0:15,0:15:33.02:0,33,322	0/0:12,0:12:23.90:0,24,218	0/0:12,0:13:25.94:0,26,320	0/0:20,0:21:48.05:0,48,481	0/0:14,0:14:41.84:0,42,432	1/1:27,0:27:40.46:131,40,0	0/0:14,0:14:36.06:0,36,373	0/1:16,2:18:4.03:4,0,341	0/0:21,0:21:18.61:0,19,382	0/0:10,0:10:24.03:0,24,251	0/0:17,0:17:42.06:0,42,424	0/0:15,0:15:7.84:0,8,259	0/0:12,0:12:31.19:0,31,291	0/0:22,0:21:36.95:0,37,369	0/0:22,0:20:60.06:0,60,605	0/0:8,0:9:26.88:0,27,262
chr10	69115037	.	AC	A	932.28	PASS	AB=0.911;AC=19;AF=0.339;AN=56;BaseQRankSum=4.348;DP=420;FS=7.216;HRun=10;HaplotypeScore=57.4108;InbreedingCoeff=-0.1831;MQ=82.00;MQ0=0;MQRankSum=-0.879;QD=3.57;ReadPosRankSum=1.541;VQSLOD=-0.5223;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:13,0:14:7.10:7,0,31	0/1:7,1:8:8.01:8,0,141	0/0:24,0:21:35.98:0,36,344	0/0:18,0:17:33.07:0,33,345	0/1:11,0:12:11.81:12,0,19	0/1:21,2:23:23.98:24,0,409	0/1:22,3:25:28.07:28,0,312	1/1:1,18:19:53.87:440,54,0	0/1:15,2:17:19.04:19,0,241	0/0:10,0:10:11.99:0,12,67	0/0:13,0:12:22.79:0,23,114	0/1:11,3:14:21.99:22,0,236	0/1:8,1:9:27.02:27,0,107	0/1:10,1:11:28.40:28,0,171	0/0:16,1:17:12.08:0,12,335	0/0:13,1:15:12.82:0,13,331	0/0:25,2:27:3.89:0,4,499	1/1:2,16:18:44.99:390,45,0	0/1:22,1:23:11.85:12,0,259	0/0:9,0:9:14.36:0,14,127	0/1:7,1:8:8.29:8,0,116	0/0:10,0:10:12.45:0,12,119	0/0:4,0:7:5.68:0,6,28	0/0:4,0:9:11.70:0,12,95	0/1:14,1:15:5.01:5,0,170	0/1:12,3:15:48.01:48,0,166	0/1:19,2:21:10.15:10,0,318	0/1:7,1:9:8.11:8,0,129
chr10	69115047	.	C	CCA	1289.10	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=4.919;DP=403;FS=3.855;HRun=0;HaplotypeScore=72.3863;InbreedingCoeff=0.9249;MQ=80.28;MQ0=0;MQRankSum=0.095;QD=13.29;ReadPosRankSum=-2.000;VQSLOD=2.5314;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,1:19:15.84:153,16,0	0/0:10,0:10:21.02:0,21,239	0/0:23,0:20:13.22:0,13,361	0/0:16,0:15:38.71:0,39,363	1/1:1,1:11:11.41:70,11,0	0/0:22,0:22:58.80:0,59,654	0/0:25,0:25:56.41:0,56,620	1/1:22,0:22:53.83:266,54,0	0/0:14,0:14:33.02:0,33,377	1/1:1,9:12:29.88:340,30,0	1/1:1,12:14:30.44:423,30,0	0/0:16,0:16:45.01:0,45,498	0/0:8,0:8:20.77:0,21,196	0/0:12,0:12:35.94:0,36,353	0/0:14,0:14:39.09:0,39,487	0/0:15,0:15:44.29:0,44,505	0/0:24,0:24:72.04:0,72,843	1/1:18,0:18:47.03:220,47,0	0/0:19,0:19:46.87:0,47,521	0/0:7,0:7:8.33:0,8,124	0/0:10,0:10:24.02:0,24,253	0/0:9,0:9:21.01:0,21,238	0/0:4,0:4:1.77:0,2,28	0/0:8,0:8:16.46:0,16,148	0/0:11,0:11:27.03:0,27,307	0/0:14,0:13:29.99:0,30,316	0/0:18,0:18:39.04:0,39,465	0/0:7,0:7:20.19:0,20,212
chr10	69115684	.	C	CA	2105.09	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-11.318;DP=588;FS=0.547;HRun=1;HaplotypeScore=65.7393;InbreedingCoeff=0.9548;MQ=94.86;MQ0=0;MQRankSum=-1.482;QD=39.72;ReadPosRankSum=-3.084;VQSLOD=2.9700;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,120,1557	0/0:5,0:5:9.03:0,9,117	0/0:31,0:32:87.25:0,87,1094	0/0:22,0:22:57.15:0,57,701	0/0:15,0:15:45.15:0,45,584	0/0:24,0:24:69.21:0,69,882	0/0:21,0:21:57.17:0,57,724	1/1:2,26:28:78.25:1147,78,0	0/0:19,0:19:57.19:0,57,740	0/0:19,0:19:54.18:0,54,701	0/0:8,0:8:24.08:0,24,310	0/0:23,0:23:69.21:0,69,878	0/0:11,0:11:33.11:0,33,428	0/0:24,0:24:72.23:0,72,935	0/0:24,0:24:69.21:0,69,882	0/0:27,0:27:78.25:0,78,1013	0/0:27,0:27:81.26:0,81,1051	1/1:0,25:25:72.24:1079,72,0	0/0:15,0:15:45.15:0,45,584	0/0:13,0:13:39.13:0,39,506	0/0:23,0:23:66.21:0,66,857	0/0:20,0:20:60.20:0,60,779	0/0:14,0:14:42.14:0,42,545	0/0:33,0:32:96.31:0,96,1245	0/0:22,0:22:66.20:0,66,843	0/0:18,0:18:48.14:0,48,609	0/0:30,0:30:90.28:0,90,1151	0/0:4,0:4:12.04:0,12,156
chr10	69115757	.	AC	A	1889.59	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=8.808;DP=579;FS=1.590;HRun=7;HaplotypeScore=63.7352;InbreedingCoeff=0.9683;MQ=78.37;MQ0=0;MQRankSum=-2.382;QD=24.23;ReadPosRankSum=2.071;VQSLOD=4.1325;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,42:45:99:1224,120,0	0/0:8,0:8:24.07:0,24,289	0/0:19,0:19:41.89:0,42,481	0/0:21,0:21:42.10:0,42,400	1/1:2,10:12:23.96:244,24,0	0/0:21,0:21:63.19:0,63,779	0/0:23,0:23:60.17:0,60,728	0/0:20,0:20:48.15:0,48,602	0/0:17,0:17:45.14:0,45,566	1/1:2,10:12:30.07:306,30,0	1/1:0,9:9:27.06:275,27,0	0/0:17,0:17:45.14:0,45,564	0/0:18,0:18:54.17:0,54,679	0/0:19,0:19:45.13:0,45,543	0/0:15,0:15:42.13:0,42,528	0/0:16,0:16:42.13:0,42,528	0/0:45,0:45:99:0,129,1610	0/0:32,0:32:87.28:0,87,1094	0/0:19,0:19:54.15:0,54,653	0/0:14,0:14:33.11:0,33,415	0/0:35,0:35:99:0,99,1227	0/0:20,0:20:54.17:0,54,676	0/0:10,0:10:27.07:0,27,326	0/0:52,0:52:99:0,147,1797	0/0:16,0:16:45.14:0,45,564	0/0:18,1:19:20.94:0,21,559	0/0:23,0:23:66.20:0,66,816	0/0:2,0:2:6.02:0,6,73
chr10	69116079	.	T	TG	5631.33	PASS	AB=0.926;AC=13;AF=0.232;AN=56;BaseQRankSum=-14.428;DP=627;FS=2.592;HRun=2;HaplotypeScore=58.1464;InbreedingCoeff=0.9022;MQ=85.39;MQ0=1;MQRankSum=-2.012;QD=35.42;ReadPosRankSum=-0.883;VQSLOD=4.7883;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,48:49:99:2068,138,0	0/0:9,0:9:24.08:0,24,311	0/0:13,0:13:36.11:0,36,450	0/0:29,0:29:72.04:0,72,853	1/1:0,11:11:33.11:495,33,0	0/0:23,0:23:66.21:0,66,857	0/0:35,0:35:99:0,102,1294	1/1:0,22:22:66.22:986,66,0	0/0:22,0:22:66.20:0,66,841	1/1:0,16:16:45.15:673,45,0	1/1:0,12:12:30.10:450,30,0	0/0:26,0:26:75.24:0,75,974	0/0:18,0:18:54.18:0,54,701	0/0:20,0:20:60.20:0,60,778	0/0:17,0:17:51.17:0,51,662	0/0:16,0:16:48.16:0,48,623	0/0:33,0:33:96.26:0,96,1212	1/1:1,23:24:30.35:945,30,0	0/0:26,0:26:72.23:0,72,935	0/0:15,0:15:45.15:0,45,583	0/0:55,0:54:99:0,160,2063	0/0:20,0:20:57.17:0,57,725	0/0:16,0:16:48.16:0,48,623	0/0:19,0:19:57.14:0,57,721	0/0:21,0:21:60.19:0,60,778	0/1:23,2:25:14.71:15,0,821	0/0:25,0:25:75.21:0,75,943	0/0:10,0:10:30.10:0,30,385
chr10	69116553	.	G	GTTT	2960.10	PASS	AB=0.971;AC=9;AF=0.161;AN=56;BaseQRankSum=3.742;DP=678;FS=3.402;HRun=8;HaplotypeScore=94.5356;InbreedingCoeff=0.8617;MQ=60.30;MQ0=9;MQRankSum=1.999;QD=21.77;ReadPosRankSum=-1.203;VQSLOD=1.1884;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,22:27:42.10:731,42,0	0/0:12,0:12:33.07:0,33,402	0/0:36,0:20:49.86:0,50,540	0/0:32,0:23:13.20:0,13,374	1/1:5,18:26:53.90:738,54,0	0/0:25,0:25:67.22:0,67,765	0/0:21,0:21:51.04:0,51,577	0/0:27,0:27:62.97:0,63,707	0/0:10,0:10:24.07:0,24,315	1/1:4,19:24:57.13:928,57,0	1/1:6,17:26:34.80:713,35,0	0/0:25,0:24:66.03:0,66,777	0/0:25,0:25:60.15:0,60,765	0/0:24,0:24:66.05:0,66,726	0/0:26,0:26:69.09:0,69,811	0/0:20,0:20:57.14:0,57,703	0/0:35,0:35:93.13:0,93,1090	0/0:22,0:22:57.10:0,57,701	0/0:20,0:19:44.19:0,44,477	0/0:19,0:19:54.17:0,54,701	0/0:20,0:20:45.01:0,45,494	0/0:25,0:25:69.15:0,69,845	0/0:28,0:28:75.19:0,75,927	0/0:29,0:29:75.02:0,75,865	0/0:25,0:25:69.16:0,69,845	0/1:32,1:33:14.85:15,0,932	0/0:31,0:30:60.50:0,60,945	0/0:5,0:5:15.05:0,15,197
chr10	69117211	.	CGTGT	C	1593.88	PASS	AB=0.899;AC=18;AF=0.321;AN=56;BaseQRankSum=8.526;DP=578;FS=0.594;HRun=0;HaplotypeScore=117.9669;InbreedingCoeff=0.4403;MQ=68.32;MQ0=7;MQRankSum=-4.703;QD=6.90;ReadPosRankSum=0.147;VQSLOD=2.6819;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:20,10:29:12.04:181,12,0	1/1:1,3:9:24.05:300,24,0	0/0:28,0:22:9.03:0,9,164	0/0:23,0:12:3.01:0,3,32	1/1:18,4:24:6.48:57,6,0	0/1:18,1:19:29.12:29,0,238	0/0:26,0:27:36.12:0,36,816	0/0:25,0:24:23.85:0,24,463	0/0:21,0:23:44.89:0,45,987	1/1:12,6:18:15.04:238,15,0	1/1:12,11:23:18.06:286,18,0	0/0:18,0:18:29.89:0,30,652	0/1:17,1:18:14.73:15,0,616	0/0:19,0:18:38.87:0,39,853	0/1:14,1:15:17.53:18,0,613	0/0:13,0:13:24.08:0,24,541	0/0:39,1:44:17.80:0,18,1238	1/1:5,13:18:36.12:571,36,0	0/0:17,0:17:10.27:0,10,132	0/1:12,2:15:17.75:18,0,527	0/0:20,0:19:33.58:0,34,743	0/0:22,0:24:38.87:0,39,865	0/0:12,0:12:24.08:0,24,561	0/0:22,0:25:56.40:0,56,1183	0/0:22,0:24:29.82:0,30,608	0/1:13,2:15:52.51:53,0,269	0/1:22,1:27:19.18:19,0,882	0/0:2,0:4:8.50:0,8,65
chr10	69117611	.	T	TAGAA	4311.09	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=10.687;DP=585;FS=6.055;HRun=0;HaplotypeScore=106.0393;InbreedingCoeff=0.9804;MQ=85.27;MQ0=0;MQRankSum=-9.287;QD=67.36;ReadPosRankSum=-1.052;VQSLOD=6.8799;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,13:16:39.08:1047,39,0	0/0:4,0:4:9.03:0,9,189	0/0:19,0:19:53.75:0,54,929	0/0:20,0:20:57.09:0,57,1114	1/1:0,14:14:39.13:1094,39,0	0/0:17,0:17:48.16:0,48,1006	0/0:24,0:24:72.23:0,72,1456	0/0:21,0:21:60.20:0,60,1205	0/0:29,0:29:87.30:0,87,1817	1/1:3,20:25:69.21:1880,69,0	1/1:2,7:9:17.92:290,18,0	0/0:21,0:21:63.22:0,63,1309	0/0:16,0:16:45.14:0,45,897	0/0:23,0:23:66.23:0,66,1383	0/0:37,0:37:99:0,111,2290	0/0:24,0:24:69.24:0,69,1434	0/0:30,0:30:90.25:0,90,1754	0/0:11,0:10:33.11:0,33,692	0/0:26,0:26:78.26:0,78,1588	0/0:19,0:19:57.18:0,57,1156	0/0:51,0:51:99:0,154,3169	0/0:29,0:29:87.30:0,87,1809	0/0:7,0:7:21.07:0,21,440	0/0:30,0:30:84.29:0,84,1732	0/0:16,0:15:48.16:0,48,991	0/0:15,0:15:39.13:0,39,818	0/0:20,0:20:60.19:0,60,1215	0/0:12,0:12:33.11:0,33,692
chr10	69118495	.	GT	G	2562.67	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=13.129;DP=591;FS=4.402;HRun=8;HaplotypeScore=69.8371;InbreedingCoeff=0.9900;MQ=75.74;MQ0=0;MQRankSum=-1.961;QD=23.30;ReadPosRankSum=0.138;VQSLOD=4.2619;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,36:42:99:985,102,0	0/0:7,0:7:18.06:0,18,217	0/0:14,0:14:32.31:0,32,364	0/0:10,0:10:18.01:0,18,188	1/1:0,15:15:42.07:406,42,0	0/0:28,0:28:75.23:0,75,906	0/0:27,0:27:66.20:0,66,797	0/0:29,0:29:78.24:0,78,941	0/0:11,0:11:33.10:0,33,399	1/1:4,28:32:84.13:811,84,0	1/1:1,20:21:54.08:521,54,0	0/0:15,0:15:42.13:0,42,507	0/0:16,1:17:42.13:0,42,506	0/0:14,0:14:33.10:0,33,394	0/0:23,0:23:66.20:0,66,797	0/0:18,0:18:48.14:0,48,569	0/0:39,0:39:99:0,105,1268	0/0:22,0:22:63.18:0,63,749	0/0:20,0:20:51.15:0,51,606	0/0:20,0:20:51.15:0,51,610	0/0:26,0:26:72.21:0,72,858	0/0:30,0:30:87.25:0,87,1037	0/0:23,0:23:63.15:0,63,733	0/0:16,0:16:48.15:0,48,580	0/0:17,1:18:22.18:0,22,551	0/0:23,0:23:63.19:0,63,756	0/0:26,0:26:75.20:0,75,882	0/0:5,0:5:15.05:0,15,181
chr10	69118706	.	GCACACACA	G	1130.16	PASS	AB=0.967;AC=19;AF=0.380;AN=50;BaseQRankSum=2.665;DP=477;FS=0.000;HRun=0;HaplotypeScore=138.3543;InbreedingCoeff=0.4452;MQ=55.35;MQ0=17;MQRankSum=-0.887;QD=5.26;ReadPosRankSum=1.283;VQSLOD=2.2910;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:32,0:32:9.59:10,0,73	0/0:9,0:13:14.89:0,15,369	./.	./.	1/1:19,0:19:4.85:46,5,0	0/0:13,0:13:15.03:0,15,401	0/0:26,0:27:18.03:0,18,357	1/1:16,0:16:2.98:34,3,0	0/0:7,0:11:3.01:0,3,102	0/1:26,0:26:30.76:31,0,494	0/0:8,0:8:0.81:0,1,103	0/0:16,0:16:25.01:0,25,656	0/0:14,0:14:18.03:0,18,340	0/0:8,0:9:12.03:0,12,336	0/0:10,0:9:9.03:0,9,344	0/0:7,0:9:21.05:0,21,395	0/0:24,0:25:39.13:0,39,917	0/1:16,0:18:17.95:144,0,18	1/1:6,0:7:3.01:56,3,0	1/1:4,3:6:6.01:100,6,0	1/1:42,0:38:8.71:229,9,0	1/1:9,5:14:2.96:20,3,0	0/0:11,0:14:2.39:0,2,128	0/0:24,0:33:5.90:0,6,41	0/0:18,0:18:27.09:0,27,771	1/1:11,8:19:4.09:441,4,0	1/1:15,0:15:9.03:181,9,0	./.
chr10	69119217	.	GT	G	2666.56	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=6.365;DP=583;FS=2.616;HRun=4;HaplotypeScore=73.8665;InbreedingCoeff=0.9988;MQ=88.06;MQ0=0;MQRankSum=-2.013;QD=27.21;ReadPosRankSum=1.267;VQSLOD=3.0474;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,30:33:75.23:898,75,0	0/0:7,0:7:21.07:0,21,294	0/0:21,0:21:54.01:0,54,673	0/0:23,0:23:57.13:0,57,695	1/1:0,19:19:42.13:503,42,0	0/0:17,0:17:51.17:0,51,714	0/0:22,0:22:63.20:0,63,864	0/0:25,0:25:72.23:0,72,980	0/0:23,0:23:69.19:0,69,915	1/1:0,21:21:63.16:729,63,0	1/1:0,25:25:60.11:696,60,0	0/0:19,0:19:57.19:0,57,796	0/0:14,0:14:39.13:0,39,545	0/0:22,0:22:66.22:0,66,924	0/0:31,0:31:93.28:0,93,1268	0/0:20,0:20:60.20:0,60,840	0/0:20,0:20:57.16:0,57,762	0/0:23,0:23:66.01:0,66,874	0/0:18,0:18:54.14:0,54,693	0/0:23,0:23:69.22:0,69,949	0/0:14,0:14:42.13:0,42,572	0/0:17,0:17:51.17:0,51,713	0/0:16,0:16:45.14:0,45,614	0/0:23,0:23:66.22:0,66,924	0/0:14,0:14:36.12:0,36,503	0/0:22,0:22:60.19:0,60,824	0/0:25,0:25:69.16:0,69,910	0/0:26,0:26:75.25:0,75,1046
chr10	69119584	.	CTATGTATG	C	419.74	PASS	AB=0.948;AC=14;AF=0.292;AN=48;BaseQRankSum=5.385;DP=771;FS=0.913;HRun=0;HaplotypeScore=123.7516;InbreedingCoeff=0.3769;MQ=42.56;MQ0=107;MQRankSum=-3.378;QD=1.35;ReadPosRankSum=-1.963;VQSLOD=1.7424;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:11:0.89:0,1,2	0/0:11,0:10:9.02:0,9,115	./.	./.	./.	0/0:29,0:25:23.08:0,23,295	0/0:22,0:19:12.03:0,12,149	1/1:42,0:21:11.86:80,12,0	0/0:34,0:27:45.15:0,45,701	0/1:15,0:12:0.37:0,0,12	./.	0/0:30,0:27:9:0,9,118	0/0:47,0:37:28.95:0,29,426	0/0:29,0:28:9.03:0,9,134	0/0:30,0:26:30.07:0,30,450	0/0:20,0:17:12.04:0,12,196	0/0:17,0:17:4.78:0,5,26	0/0:28,0:24:7.21:0,7,54	0/1:14,5:12:30.97:53,0,31	0/0:28,16:26:1.90:0,2,18	1/1:43,0:26:3.45:26,3,0	0/0:34,0:28:24.08:0,24,368	1/1:37,0:23:6.46:49,6,0	1/1:36,0:20:3.01:44,3,0	0/0:33,0:33:36.59:0,37,604	0/1:45,0:28:15.26:211,0,15	1/1:40,0:27:2.91:19,3,0	0/1:34,0:23:79.03:79,0,113
chr10	69119620	.	GTATGTATGTATC	G	1103.33	PASS	AB=1.000;AC=15;AF=0.288;AN=52;BaseQRankSum=2.155;DP=737;FS=1.842;HRun=0;HaplotypeScore=175.5971;InbreedingCoeff=0.0375;MQ=42.86;MQ0=88;MQRankSum=-1.733;QD=2.90;ReadPosRankSum=-0.983;VQSLOD=2.6840;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:21:25.12:0,25,189	0/0:9,0:9:21.02:0,21,238	./.	./.	0/1:28,0:25:0:0,0,0	0/1:22,0:21:84.77:85,0,247	0/1:17,0:15:54.85:55,0,114	1/1:53,0:35:35.48:239,35,0	0/1:33,0:29:80.80:81,0,623	0/0:22,0:19:22.88:0,23,235	0/0:17,0:16:14.69:0,15,117	0/0:29,0:26:38.97:0,39,386	0/0:43,0:33:31.97:0,32,597	0/0:25,0:23:5.04:0,5,255	0/0:23,0:22:47.68:0,48,615	0/0:22,0:20:39.02:0,39,436	0/1:15,0:15:11.37:11,0,18	0/1:22,0:19:22.75:80,0,23	0/1:20,0:12:18.30:18,0,174	0/0:45,0:26:25.91:0,26,288	0/1:32,0:17:1.55:2,0,159	0/0:30,0:25:45.07:0,45,566	0/1:35,0:23:21.41:21,0,192	0/1:35,0:19:31.98:32,0,81	0/0:34,0:34:66.59:0,67,883	1/1:18,24:25:14.04:467,14,0	0/0:33,0:20:16.41:0,16,291	0/1:26,0:18:99:168,0,103
chr10	69119675	.	TCTAC	T	773.24	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=10.232;DP=591;FS=0.000;HRun=0;HaplotypeScore=122.4615;InbreedingCoeff=0.8890;MQ=60.65;MQ0=27;MQRankSum=1.074;QD=7.58;ReadPosRankSum=-3.801;VQSLOD=1.1263;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:27:27.10:195,27,0	0/0:8,0:8:24.04:0,24,326	0/0:19,0:13:28.78:0,29,296	0/0:11,0:10:4.91:0,5,190	1/1:7,20:25:43.98:276,44,0	0/0:18,0:18:31.70:0,32,221	0/0:20,0:20:47.39:0,47,373	0/0:32,0:23:62.87:0,63,527	0/0:19,0:18:0.89:0,1,142	1/1:27,1:27:20.18:317,20,0	1/1:19,0:19:17.40:142,17,0	0/0:35,0:35:93.10:0,93,1252	0/0:21,0:21:55.97:0,56,682	0/0:20,0:19:47.58:0,48,625	0/0:23,0:22:59.78:0,60,674	0/0:25,0:24:63.12:0,63,878	0/0:17,0:17:34.80:0,35,293	0/0:16,0:15:17.70:0,18,174	0/0:9,0:8:21.01:0,21,278	0/0:23,0:21:57.03:0,57,699	0/0:21,0:18:47.05:0,47,534	0/0:22,0:19:39.06:0,39,511	0/0:20,0:18:39.06:0,39,505	0/0:21,0:17:32.93:0,33,345	0/0:29,0:29:78.15:0,78,1077	0/0:26,0:25:46.33:0,46,349	0/0:29,0:28:80.95:0,81,945	0/0:5,0:5:11.46:0,11,75
chr10	69120094	.	T	TCC	3209.08	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=10.722;DP=406;FS=19.041;HRun=0;HaplotypeScore=81.0417;InbreedingCoeff=0.7702;MQ=69.54;MQ0=0;MQRankSum=-5.068;QD=30.27;ReadPosRankSum=7.069;VQSLOD=3.5209;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:24,9:33:63.13:956,63,0	0/0:1,0:1:3.01:0,3,47	0/0:25,0:22:60.78:0,61,811	0/0:21,0:19:42.03:0,42,536	1/1:22,0:22:54.16:830,54,0	0/0:14,0:14:36.10:0,36,525	0/0:20,0:20:48.62:0,49,726	0/0:13,0:14:36.08:0,36,465	0/0:16,0:16:45.14:0,45,664	1/1:25,0:26:72.16:1054,72,0	1/1:13,0:13:33.10:513,33,0	0/0:13,0:13:17.95:0,18,239	0/0:13,0:13:39.10:0,39,548	0/0:7,0:7:15.05:0,15,218	0/0:18,0:19:45.14:0,45,678	0/0:14,0:15:36.12:0,36,562	0/0:20,0:21:57.78:0,58,888	0/0:5,0:6:9.02:0,9,140	0/0:6,0:6:14.21:0,14,163	0/0:12,0:11:29.46:0,29,402	0/0:13,0:14:33.06:0,33,477	0/0:8,0:8:24.08:0,24,360	0/0:11,0:11:27.09:0,27,427	0/0:11,0:11:30.10:0,30,432	0/0:9,0:9:20.95:0,21,267	0/1:12,0:12:19.13:19,0,376	0/0:20,0:20:29.88:0,30,379	0/0:1,0:1:3.01:0,3,44
chr10	69120095	.	A	AC	745.04	PASS	AB=0.914;AC=22;AF=0.393;AN=56;BaseQRankSum=8.860;DP=420;FS=0.629;HRun=11;HaplotypeScore=88.5158;InbreedingCoeff=0.5922;MQ=68.79;MQ0=0;MQRankSum=-5.224;QD=3.78;ReadPosRankSum=2.569;VQSLOD=0.6840;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:33,0:33:55.72:233,56,0	0/1:1,0:1:0:0,0,0	0/0:27,0:22:18.77:0,19,198	0/0:20,1:19:15.08:0,15,120	1/1:23,0:23:43.18:182,43,0	0/0:14,0:14:11.87:0,12,90	0/0:18,0:21:13.91:0,14,98	0/0:15,0:15:4.98:0,5,29	0/0:15,1:17:13.67:0,14,93	1/1:26,0:26:56.62:236,57,0	1/1:13,0:13:27.11:115,27,0	0/0:5,10:15:2.65:0,3,11	0/1:14,0:14:0:0,0,0	0/1:7,0:7:0:0,0,0	0/0:19,0:19:11.83:0,12,91	0/0:14,0:16:11.14:0,11,92	0/0:20,0:21:8.07:0,8,147	0/0:6,1:7:0.42:0,0,1	1/1:7,0:7:5.72:30,6,0	1/1:9,3:12:4.72:35,5,0	0/1:12,2:14:14.89:15,0,20	0/0:8,0:8:10.47:0,10,61	0/0:11,0:11:14.90:0,15,114	0/1:9,1:11:0.84:25,0,1	0/0:7,0:10:9.15:0,9,56	1/1:11,1:13:2.68:11,3,0	0/1:11,9:20:0:0,0,0	1/1:2,0:2:3.01:30,3,0
chr10	69120096	.	C	CT	1750.49	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=11.890;DP=413;FS=18.383;HRun=0;HaplotypeScore=81.1558;InbreedingCoeff=0.8219;MQ=68.91;MQ0=0;MQRankSum=-5.303;QD=17.86;ReadPosRankSum=7.876;VQSLOD=3.8391;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,24:33:65.17:561,65,0	0/0:1,0:1:3:0,3,26	0/0:26,0:21:58.12:0,58,637	0/0:21,0:17:28.53:0,29,347	1/1:6,16:23:24.46:433,24,0	0/0:15,0:15:35.98:0,36,363	0/0:21,0:21:50.92:0,51,490	0/0:14,0:14:26.91:0,27,234	0/0:16,0:16:41.96:0,42,407	1/1:6,20:26:57.36:634,57,0	1/1:2,11:13:15.88:278,16,0	0/0:15,0:15:17.89:0,18,148	0/0:12,0:12:32.95:0,33,275	0/0:7,0:7:14.03:0,14,109	0/0:18,0:18:42.05:0,42,431	0/0:16,0:16:36.90:0,37,373	0/0:22,0:22:59.99:0,60,613	0/0:7,0:7:9:0,9,79	0/0:7,0:7:16.23:0,16,103	0/0:13,0:12:18.88:0,19,200	0/0:13,0:14:31.22:0,31,270	0/0:8,0:8:24:0,24,235	0/0:11,0:11:27.05:0,27,312	0/0:11,0:11:24:0,24,213	0/0:9,0:9:20.05:0,20,171	0/0:12,1:13:8.03:0,8,197	0/0:18,0:18:20.75:0,21,174	0/1:3,0:3:2.93:3,0,18
chr10	69120101	.	C	CA	1575.71	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=11.998;DP=425;FS=9.045;HRun=0;HaplotypeScore=80.3735;InbreedingCoeff=0.8995;MQ=66.36;MQ0=1;MQRankSum=-4.495;QD=17.13;ReadPosRankSum=9.692;VQSLOD=4.8082;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,24:31:67.87:514,68,0	0/0:2,0:2:6:0,6,52	0/0:27,0:21:48.36:0,48,533	0/0:15,0:11:29.32:0,29,301	1/1:4,17:21:53.49:409,53,0	0/0:16,0:16:39.01:0,39,397	0/0:23,0:23:53.79:0,54,510	0/0:20,0:20:32.96:0,33,298	0/0:16,0:16:44.97:0,45,438	1/1:8,20:28:64.25:560,64,0	1/1:1,11:12:32.79:251,33,0	0/0:15,0:15:14.99:0,15,134	0/0:12,0:12:32.99:0,33,283	0/0:8,0:8:14.98:0,15,126	0/0:18,0:18:42.06:0,42,435	0/0:17,0:17:38.97:0,39,392	0/0:23,0:23:64.24:0,64,646	0/0:9,0:9:9.47:0,9,79	0/0:6,0:6:17.91:0,18,140	0/0:11,0:10:16.09:0,16,179	0/0:15,0:15:31.26:0,31,283	0/0:9,0:9:26.92:0,27,252	0/0:11,0:11:27.04:0,27,303	0/0:13,0:13:30:0,30,264	0/0:9,0:9:23.89:0,24,206	0/0:16,1:17:9.19:0,9,212	0/0:19,0:19:20.92:0,21,172	0/0:2,0:2:5.77:0,6,34
chr10	69121941	.	C	CA	941.64	PASS	AB=0.849;AC=18;AF=0.321;AN=56;BaseQRankSum=-2.640;DP=465;FS=0.000;HRun=13;HaplotypeScore=62.1538;InbreedingCoeff=0.0359;MQ=56.01;MQ0=19;MQRankSum=-0.740;QD=4.90;ReadPosRankSum=-0.528;VQSLOD=1.3962;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,1:32:31.09:0,31,277	0/0:6,0:9:16.90:0,17,109	0/1:12,0:7:2.93:3,0,37	0/1:9,0:7:15.42:15,0,30	0/0:15,0:14:14.90:0,15,88	0/0:20,1:21:33.66:0,34,363	0/0:18,0:17:31.69:0,32,211	0/1:12,6:18:38.52:138,0,39	0/1:5,1:5:15.92:16,0,48	0/1:13,1:12:15.01:15,0,37	0/1:14,1:15:12.86:13,0,61	0/1:12,1:11:4.10:4,0,118	0/0:9,0:10:13.86:0,14,87	0/0:15,0:16:9.65:0,10,158	0/0:13,1:16:5.94:0,6,167	0/0:13,0:14:17.57:0,18,99	0/0:41,1:42:50.47:0,50,476	0/1:8,11:18:11.12:193,0,11	0/1:7,3:10:12.41:68,0,12	0/1:5,5:11:17.31:122,0,17	1/1:3,7:10:14.18:161,14,0	0/0:18,0:18:38.64:0,39,267	0/1:17,1:17:5.13:5,0,102	0/0:30,0:32:79.51:0,80,516	0/0:20,1:21:9.82:0,10,204	1/1:7,6:13:3.28:160,3,0	0/1:4,2:6:6.62:68,0,7	1/1:7,5:12:14.85:126,15,0
chr10	69121954	.	AT	A	508.29	PASS	AB=0.971;AC=7;AF=0.125;AN=56;BaseQRankSum=0.558;DP=436;FS=2.381;HRun=1;HaplotypeScore=62.9215;InbreedingCoeff=0.7283;MQ=68.65;MQ0=10;MQRankSum=-0.531;QD=7.06;ReadPosRankSum=-3.323;VQSLOD=-0.3916;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:32,1:32:20.84:116,0,21	0/0:8,0:8:12.13:0,12,188	0/0:17,0:12:33.91:0,34,289	0/0:14,1:12:7.63:0,8,110	1/1:12,3:15:12.44:197,12,0	0/0:24,0:24:70.03:0,70,829	0/0:17,0:17:40.32:0,40,459	0/0:15,0:15:40.75:0,41,357	0/0:9,0:8:21:0,21,213	1/1:10,1:10:17.99:165,18,0	1/1:13,0:13:6.42:166,6,0	0/0:12,0:11:30.04:0,30,327	0/0:8,0:8:9.45:0,9,177	0/0:16,0:15:37.45:0,37,436	0/0:14,0:14:40.22:0,40,430	0/0:12,0:12:15.60:0,16,249	0/0:39,0:39:99:0,112,1210	0/0:14,0:14:29.96:0,30,267	0/0:8,0:8:19.88:0,20,176	0/0:10,0:10:26.98:0,27,251	0/0:12,0:11:25.17:0,25,189	0/0:16,0:16:45.11:0,45,542	0/0:15,0:13:34.25:0,34,368	0/0:33,0:31:75.67:0,76,948	0/0:21,0:21:58.25:0,58,606	0/0:13,0:13:11.42:0,11,274	0/0:6,0:6:14.99:0,15,137	0/0:10,0:10:26.94:0,27,226
chr10	69122050	.	ATC	A	264.22	PASS	AB=1.000;AC=20;AF=0.417;AN=48;BaseQRankSum=1.037;DP=437;FS=3.898;HRun=0;HaplotypeScore=65.9613;InbreedingCoeff=0.3199;MQ=71.71;MQ0=14;MQRankSum=1.400;QD=1.65;ReadPosRankSum=1.206;VQSLOD=1.4457;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:19,0:19:3.32:3,0,112	1/1:4,0:3:2.99:23,3,0	./.	0/0:42,0:22:0:0,0,0	0/0:17,0:17:2.99:0,3,23	1/1:14,0:14:2.19:19,2,0	0/1:19,0:19:10.43:10,0,56	./.	0/1:11,0:10:17.96:18,0,18	0/0:20,0:20:14.90:0,15,113	0/0:15,0:15:2.97:0,3,20	0/1:10,0:10:23.91:36,0,24	1/1:14,0:14:8.89:59,9,0	0/0:14,0:14:12.02:0,12,77	1/1:15,5:20:3.01:32,3,0	./.	0/0:23,0:22:9.50:0,9,200	1/1:16,0:15:16.43:109,16,0	0/0:17,0:15:10.87:0,11,70	./.	0/0:16,0:15:0:0,0,0	1/1:10,0:10:5.88:37,6,0	1/1:8,0:8:2.99:23,3,0	1/1:14,1:14:5.90:40,6,0	0/0:15,0:14:2.74:0,3,12	0/0:14,0:14:8.87:0,9,62	0/0:6,0:6:5.99:0,6,50	0/0:12,0:11:2.98:0,3,21
chr10	69122099	.	TCACACA	T	76.97	PASS	AB=0.923;AC=5;AF=0.096;AN=52;BaseQRankSum=-0.712;DP=323;FS=9.214;HRun=0;HaplotypeScore=75.0795;InbreedingCoeff=0.3744;MQ=44.42;MQ0=30;MQRankSum=1.939;QD=2.20;ReadPosRankSum=-0.868;VQSLOD=0.2317;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:22:6.79:0,7,112	0/0:5,0:5:5.60:0,6,139	./.	0/0:9,0:3:4.23:0,4,56	0/0:15,0:14:14.71:0,15,131	0/0:12,0:11:21.06:0,21,502	0/0:15,0:14:17.95:0,18,335	0/0:21,0:16:27.56:0,28,547	0/0:9,0:7:12.04:0,12,271	1/1:11,0:11:5.99:121,6,0	1/1:6,6:12:2.97:20,3,0	0/0:8,0:7:11.96:0,12,210	0/0:14,0:14:27.55:0,28,511	0/0:15,0:12:3.44:0,3,178	0/0:13,0:13:17.99:0,18,398	0/0:5,0:5:9.03:0,9,180	0/0:22,0:21:12.27:0,12,514	0/0:15,0:14:24.08:0,24,553	0/0:7,0:6:12.04:0,12,283	./.	0/0:17,0:12:18.53:0,19,346	0/0:10,0:6:9.03:0,9,216	0/0:8,0:8:9.03:0,9,236	0/0:19,0:16:24.97:0,25,612	0/1:11,0:10:40.63:41,0,377	0/0:9,0:8:6.02:0,6,120	0/0:6,0:6:0.47:0,0,1	0/0:3,0:2:3.01:0,3,76
chr10	69122594	.	TA	T	2034.32	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=10.424;DP=565;FS=10.166;HRun=9;HaplotypeScore=57.1944;InbreedingCoeff=0.8716;MQ=78.47;MQ0=0;MQRankSum=0.876;QD=16.41;ReadPosRankSum=1.750;VQSLOD=2.8991;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,30:37:69.02:631,69,0	0/0:8,0:8:24.06:0,24,267	0/1:17,0:16:8.97:9,0,261	0/0:14,0:13:26.71:0,27,259	1/1:5,18:23:19.15:417,19,0	0/0:21,0:21:60.18:0,60,692	0/0:15,0:15:39.09:0,39,429	0/0:18,0:18:48.12:0,48,537	0/0:21,0:21:57.16:0,57,649	1/1:4,25:29:75:674,75,0	1/1:0,18:18:51.03:467,51,0	0/0:17,0:17:45.13:0,45,519	0/0:23,0:23:63.19:0,63,727	0/0:15,0:15:36.11:0,36,415	0/0:23,0:23:60.15:0,60,671	0/0:20,0:20:57.16:0,57,648	0/0:20,0:21:54.03:0,54,603	0/0:17,0:17:45.12:0,45,508	0/0:23,0:23:57.14:0,57,632	0/0:32,0:32:90.26:0,90,1034	0/0:15,0:15:45.11:0,45,499	0/0:16,0:16:45.13:0,45,519	0/0:24,0:24:66.19:0,66,754	0/0:25,0:25:63.15:0,63,697	0/0:23,0:23:66.20:0,66,762	0/0:24,0:25:45.57:0,46,718	0/0:21,0:21:60.04:0,60,664	0/0:4,0:4:12.04:0,12,138
chr10	69125169	.	CTCTCCAGCCCCT	C	5012.01	PASS	AB=0.909;AC=17;AF=0.304;AN=56;BaseQRankSum=9.536;DP=296;FS=15.688;HRun=0;HaplotypeScore=119.3215;InbreedingCoeff=0.8233;MQ=87.72;MQ0=0;MQRankSum=-9.951;QD=74.81;ReadPosRankSum=1.346;VQSLOD=3.9003;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:30.10:0,30,1850	0/0:9,0:9:27.09:0,27,1612	0/0:18,0:19:35.35:0,35,2243	0/0:19,0:17:42.31:0,42,1638	0/0:5,0:5:15.05:0,15,700	0/0:13,0:13:36.12:0,36,2101	0/0:12,0:12:33.11:0,33,2048	1/1:7,5:12:18.05:595,18,0	0/0:6,0:6:18.06:0,18,1114	0/1:9,1:10:86.91:87,0,1373	0/0:3,0:3:6.02:0,6,321	0/0:11,0:11:33.11:0,33,1800	0/0:12,0:12:36.12:0,36,2101	0/0:10,0:10:30.10:0,30,1802	0/0:18,0:18:51.17:0,51,3017	0/0:10,0:10:30.10:0,30,1862	0/0:26,0:26:78.27:0,78,4540	1/1:0,2:2:6.02:228,6,0	1/1:3,9:12:27.09:1026,27,0	1/1:0,10:10:30.10:1140,30,0	1/1:2,1:3:3.01:114,3,0	0/0:6,0:6:18.06:0,18,1065	0/0:8,0:8:24.08:0,24,1468	0/0:14,0:14:42.14:0,42,2593	0/0:16,0:16:45.15:0,45,2674	1/1:0,5:5:15.05:570,15,0	1/1:0,10:10:27.09:1026,27,0	1/1:1,2:3:6.02:228,6,0
chr10	69125191	.	GT	G	2110.49	PASS	AB=0.867;AC=25;AF=0.446;AN=56;BaseQRankSum=11.900;DP=346;FS=10.600;HRun=10;HaplotypeScore=75.4968;InbreedingCoeff=0.8827;MQ=92.44;MQ0=0;MQRankSum=-8.939;QD=17.16;ReadPosRankSum=-0.741;VQSLOD=3.2547;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,11:13:26.99:234,27,0	0/0:11,0:11:24.06:0,24,265	0/0:26,1:25:33.25:0,33,364	0/0:21,2:21:20.31:0,20,282	1/1:1,4:5:11.99:104,12,0	0/0:15,0:15:39.06:0,39,411	0/0:12,0:12:30.08:0,30,332	1/1:2,14:16:38.99:338,39,0	0/0:6,0:6:12.03:0,12,133	1/1:0,14:14:41.99:364,42,0	1/1:0,9:9:20.86:171,21,0	0/0:9,0:9:23.09:0,23,238	0/0:12,0:12:27.04:0,27,280	0/0:11,0:11:33.07:0,33,356	0/0:18,0:18:36.09:0,36,390	0/1:10,2:13:22.25:22,0,208	0/0:29,0:29:81.19:0,81,884	1/1:0,3:3:9:78,9,0	1/1:4,8:12:23.98:208,24,0	1/1:0,10:10:29.79:247,30,0	1/1:0,4:4:5.97:52,6,0	0/0:7,0:7:18.04:0,18,192	0/0:9,0:9:23.41:0,23,223	0/0:12,0:13:20.11:0,20,259	0/0:20,1:21:25.06:0,25,491	1/1:1,7:8:20.99:182,21,0	1/1:2,11:13:29.99:260,30,0	1/1:1,2:3:8.97:72,9,0
chr10	69125934	.	TC	T	6117.76	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=9.722;DP=485;FS=3.627;HRun=6;HaplotypeScore=50.6432;InbreedingCoeff=0.9981;MQ=86.74;MQ0=0;MQRankSum=-1.969;QD=26.95;ReadPosRankSum=2.102;VQSLOD=5.3403;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,17:19:39.10:419,39,0	0/0:7,0:7:18.06:0,18,233	0/0:24,0:23:23.33:0,23,515	0/0:13,0:13:30.07:0,30,354	1/1:0,23:23:68.90:707,69,0	0/0:21,0:21:57.19:0,57,749	0/0:16,0:16:45.13:0,45,577	1/1:5,16:21:42.06:432,42,0	0/0:19,0:19:48.14:0,48,613	1/1:1,21:22:63.15:671,63,0	1/1:1,20:21:47.97:476,48,0	0/0:16,0:16:48.16:0,48,629	0/0:14,0:14:33.01:0,33,396	0/0:9,0:9:27.07:0,27,339	0/0:15,0:15:42.12:0,42,537	0/0:13,0:13:33.11:0,33,434	0/0:25,0:25:72.22:0,72,919	1/1:0,12:12:30.07:322,30,0	1/1:2,11:13:33.07:346,33,0	1/1:1,16:17:48.12:514,48,0	1/1:0,22:22:51.13:548,51,0	0/0:14,0:14:42.14:0,42,550	0/0:15,0:15:36.10:0,36,458	0/0:16,0:16:42.14:0,42,551	0/0:21,0:21:51.17:0,51,669	1/1:2,20:22:62.98:651,63,0	1/1:2,18:20:51.13:548,51,0	1/1:0,15:15:45.11:484,45,0
chr10	69126260	.	A	ATCTCTCTCTC	5631.89	PASS	AB=0.800;AC=23;AF=0.442;AN=52;BaseQRankSum=3.245;DP=535;FS=16.623;HRun=0;HaplotypeScore=175.1153;InbreedingCoeff=0.8191;MQ=69.24;MQ0=3;MQRankSum=-6.997;QD=22.17;ReadPosRankSum=-5.180;VQSLOD=1.5723;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:24:3.06:96,3,0	0/0:6,0:6:9.03:0,9,222	0/0:27,0:20:6.78:0,7,179	0/0:30,0:22:17.97:0,18,350	1/1:24,0:26:2.21:87,2,0	0/0:35,0:36:60.92:0,61,1511	0/0:20,0:20:29.49:0,29,711	1/1:33,0:33:24.85:343,25,0	0/0:10,0:12:21.05:0,21,543	1/1:21,0:18:27.09:1072,27,0	1/1:16,0:16:5.82:41,6,0	0/0:10,0:10:12.04:0,12,350	0/0:8,0:9:18.06:0,18,517	0/0:15,0:15:27.04:0,27,693	0/0:20,0:20:30.10:0,30,796	0/0:15,0:15:27.09:0,27,771	0/0:27,0:30:47.84:0,48,1336	1/1:9,3:13:15.05:629,15,0	1/1:20,0:19:33.07:1050,33,0	1/1:10,0:14:2.60:84,3,0	./.	0/0:14,0:14:21.06:0,21,429	1/1:9,0:18:5.58:101,6,0	0/1:12,3:16:0:0,0,0	0/0:16,0:16:21.07:0,21,597	1/1:17,6:25:48.16:1835,48,0	1/1:16,5:23:14.92:295,15,0	./.
chr10	69126288	.	C	CTCTCTCTCTG	4492.96	PASS	AB=0.974;AC=16;AF=0.286;AN=56;BaseQRankSum=5.330;DP=574;FS=0.424;HRun=0;HaplotypeScore=186.8704;InbreedingCoeff=0.2615;MQ=49.75;MQ0=13;MQRankSum=-4.159;QD=17.83;ReadPosRankSum=-2.500;VQSLOD=3.7274;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:19:29.69:432,30,0	0/0:7,0:7:21:0,21,364	0/0:26,0:9:12.72:0,13,203	0/0:24,0:10:20.87:0,21,320	1/1:23,0:21:22.96:255,23,0	0/0:39,0:40:78.17:0,78,1728	0/0:21,0:21:34.43:0,34,956	0/1:28,0:27:99:142,0,176	0/0:17,0:17:38.59:0,39,723	1/1:29,0:23:42.44:934,42,0	1/1:14,0:14:2.78:161,3,0	0/1:8,0:8:2.93:3,0,372	0/0:15,0:15:18.88:0,19,588	0/0:29,0:29:74.82:0,75,1024	0/0:15,0:17:15.56:0,16,842	0/0:13,0:13:11.12:0,11,783	0/0:28,0:29:69.06:0,69,1521	0/1:15,0:15:99:358,0,106	0/1:20,3:25:40.54:826,0,41	0/1:16,0:16:1.16:1,0,62	0/0:15,0:14:14.70:0,15,98	0/1:19,0:19:99:208,0,269	0/0:25,0:25:27.25:0,27,212	0/0:14,0:14:5.99:0,6,47	0/0:27,0:27:68.99:0,69,1016	0/1:30,0:30:99:993,0,173	0/1:22,0:22:99:181,0,142	0/0:3,0:3:3.25:0,3,35
chr10	69126800	.	C	CT	3115.97	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=0.956;DP=683;FS=34.182;HRun=3;HaplotypeScore=76.8990;InbreedingCoeff=0.9407;MQ=59.29;MQ0=18;MQRankSum=1.595;QD=32.80;ReadPosRankSum=1.657;VQSLOD=1.4089;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,44:47:99:1676,120,0	0/0:8,0:8:15.04:0,15,179	0/0:26,0:16:48.13:0,48,553	0/0:29,0:14:36.10:0,36,423	1/1:3,10:13:27.09:378,27,0	0/0:24,0:24:63.18:0,63,744	0/0:25,0:24:69.20:0,69,818	0/0:29,0:29:81.16:0,81,918	0/0:27,0:27:81.21:0,81,946	1/1:0,19:19:57.15:760,57,0	1/1:4,11:15:33.11:462,33,0	0/0:37,0:37:99:0,111,1296	0/0:19,0:19:48.13:0,48,564	0/0:29,0:29:87.26:0,87,1034	0/0:32,0:32:96.27:0,96,1129	0/0:25,0:25:72.21:0,72,853	0/0:32,0:32:90.28:0,90,1080	0/0:30,0:30:87.21:0,87,1025	0/0:15,0:15:45.09:0,45,502	0/0:20,0:20:57.17:0,57,684	0/0:43,0:43:99:0,102,1222	0/0:19,0:19:45.14:0,45,539	0/0:26,0:26:66.20:0,66,792	0/0:34,0:34:93.24:0,93,1099	0/0:15,0:15:36.03:0,36,407	0/0:18,1:19:12.13:0,12,560	0/0:24,0:24:72.19:0,72,838	0/0:1,0:1:3.01:0,3,36
chr10	69127071	.	C	CA	12967.58	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-16.466;DP=653;FS=2.065;HRun=1;HaplotypeScore=57.6986;InbreedingCoeff=0.9918;MQ=81.28;MQ0=0;MQRankSum=-1.977;QD=41.17;ReadPosRankSum=-0.666;VQSLOD=4.9998;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,31:31:93.32:1394,93,0	0/0:11,0:11:33.09:0,33,414	0/0:17,0:17:48.09:0,48,567	0/0:18,0:18:47.22:0,47,542	1/1:1,34:35:90.26:1324,90,0	0/0:32,0:32:93.30:0,93,1206	0/0:22,0:22:66.20:0,66,842	1/1:5,36:41:99:1559,108,0	0/0:23,0:23:69.18:0,69,851	1/1:0,26:26:78.25:1150,78,0	1/1:0,27:27:75.25:1124,75,0	0/0:18,0:18:54.16:0,54,684	0/0:16,0:16:45.13:0,45,567	0/0:10,0:10:30.08:0,30,375	0/0:26,0:26:78.25:0,78,1013	0/0:21,0:21:60.19:0,60,779	0/0:25,0:25:69.20:0,69,880	1/1:0,20:20:60.20:899,60,0	1/1:1,21:22:63.15:917,63,0	1/1:0,37:37:99:1519,108,0	1/1:1,18:19:54.18:809,54,0	0/0:28,0:28:81.26:0,81,1051	0/0:31,0:31:87.26:0,87,1102	0/0:20,0:20:60.18:0,60,765	0/0:20,0:20:60.19:0,60,768	1/1:0,25:25:75.24:1103,75,0	1/1:2,27:29:69.23:1034,69,0	1/1:0,3:3:9.03:135,9,0
chr10	69127511	.	GT	G	6927.17	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=12.220;DP=606;FS=4.158;HRun=8;HaplotypeScore=58.9417;InbreedingCoeff=0.9769;MQ=75.37;MQ0=0;MQRankSum=-1.876;QD=25.01;ReadPosRankSum=-0.348;VQSLOD=5.5147;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,37:42:99:1013,105,0	0/0:2,0:2:6.02:0,6,72	0/0:15,0:14:24.07:0,24,280	0/0:19,0:19:45.11:0,45,501	1/1:5,21:26:54.07:521,54,0	0/0:25,0:25:69.18:0,69,809	0/0:33,0:33:90.24:0,90,1053	1/1:1,22:23:65.78:619,66,0	0/0:24,0:24:69.19:0,69,812	1/1:1,18:19:54.03:506,54,0	1/1:1,19:20:51.05:483,51,0	0/0:21,0:21:60.18:0,60,716	0/0:15,0:15:45.13:0,45,532	0/0:20,0:20:60.18:0,60,722	0/0:20,0:20:57.16:0,57,677	0/0:12,0:12:30.08:0,30,352	0/0:29,0:29:72.20:0,72,856	1/1:2,25:27:72.11:695,72,0	1/1:0,17:17:51.07:487,51,0	1/1:3,21:24:63.10:607,63,0	1/1:1,26:27:72.12:695,72,0	0/0:23,0:23:54.14:0,54,630	0/0:24,0:24:66.20:0,66,793	0/0:24,0:24:69.19:0,69,810	0/0:23,0:23:57.17:0,57,678	1/1:2,25:27:69.10:664,69,0	1/1:0,22:22:57.09:550,57,0	1/1:0,3:3:9.01:87,9,0
chr10	69128546	.	T	TG	2971.82	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=0.713;DP=579;FS=7.892;HRun=8;HaplotypeScore=91.8006;InbreedingCoeff=0.9690;MQ=81.77;MQ0=1;MQRankSum=-4.514;QD=20.93;ReadPosRankSum=-1.220;VQSLOD=2.9951;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:44.97:0,45,399	0/0:14,0:14:33:0,33,301	0/0:20,0:20:29.21:0,29,253	0/0:19,0:17:26.78:0,27,226	0/0:16,0:16:35.86:0,36,316	0/0:20,0:20:51.02:0,51,466	0/0:21,0:21:57.01:0,57,517	1/1:14,18:32:48.13:544,48,0	0/0:29,0:29:62.50:0,63,575	0/0:16,0:16:35.51:0,36,324	0/0:20,0:20:41.96:0,42,379	0/0:27,0:27:62.97:0,63,571	0/0:22,0:22:44.99:0,45,411	0/0:16,0:16:39:0,39,351	0/0:33,0:33:72:0,72,654	0/0:16,0:16:30.01:0,30,275	0/0:34,0:34:65.94:0,66,591	1/1:8,15:23:51.09:566,51,0	1/1:11,10:21:42.06:450,42,0	1/1:3,9:12:27.08:311,27,0	1/1:4,7:11:21.06:242,21,0	0/0:25,0:25:72.04:0,72,659	0/0:19,0:19:45:0,45,411	0/0:30,0:30:72.02:0,72,659	0/0:12,0:12:30.01:0,30,275	1/1:7,14:21:42.12:473,42,0	1/1:5,15:20:48.14:553,48,0	1/1:1,1:2:3.01:35,3,0
chr10	69128902	.	ATTT	A	1240.03	PASS	AB=0.677;AC=14;AF=0.250;AN=56;BaseQRankSum=7.451;DP=459;FS=6.523;HRun=17;HaplotypeScore=72.0847;InbreedingCoeff=0.4527;MQ=75.24;MQ0=7;MQRankSum=-4.140;QD=8.05;ReadPosRankSum=4.024;VQSLOD=-0.6580;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:6,1:21:10.47:10,0,58	0/0:8,0:9:12.02:0,12,166	0/0:41,0:18:12.04:0,12,165	0/0:24,0:11:18.76:0,19,208	0/1:2,0:13:23.90:24,0,39	0/0:12,0:14:33.07:0,33,495	0/0:15,0:17:36.10:0,36,580	0/1:15,9:24:5.10:216,0,5	0/0:16,0:16:27.09:0,27,453	0/0:15,0:16:27.09:0,27,388	0/0:9,0:9:14.98:0,15,187	0/0:11,0:12:30.10:0,30,464	0/0:11,0:12:27:0,27,361	0/0:13,0:15:39.09:0,39,563	0/0:11,0:13:27.07:0,27,418	0/0:12,0:12:21.05:0,21,338	0/0:25,0:25:54.18:0,54,905	0/1:3,8:12:1.75:149,0,2	0/1:15,3:18:51.74:104,0,52	0/1:7,2:9:18.39:51,0,18	1/1:4,8:12:14.47:178,14,0	0/0:13,0:13:27.08:0,27,400	0/0:9,0:10:19.31:0,19,303	0/0:20,0:22:45.09:0,45,671	0/0:24,0:24:66.16:0,66,1047	1/1:10,10:22:16.36:323,16,0	1/1:9,10:20:35.46:326,35,0	1/1:0,1:1:3.01:30,3,0
chr10	69128919	.	TAA	T	1174.88	PASS	AB=0.962;AC=14;AF=0.250;AN=56;BaseQRankSum=5.825;DP=499;FS=3.228;HRun=5;HaplotypeScore=80.5125;InbreedingCoeff=0.4676;MQ=66.56;MQ0=19;MQRankSum=-1.097;QD=7.99;ReadPosRankSum=3.658;VQSLOD=-0.5780;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:43.04:0,43,410	0/0:6,0:6:18.06:0,18,266	0/0:46,0:15:26.24:0,26,299	0/0:32,0:12:15.80:0,16,217	0/0:19,0:18:46.04:0,46,449	0/0:16,0:14:34.68:0,35,410	0/0:15,0:15:42.08:0,42,576	1/1:18,0:17:1.66:94,2,0	0/0:11,0:11:29.99:0,30,438	0/1:12,3:16:14.23:358,0,14	1/1:14,2:16:30.04:366,30,0	0/0:16,0:14:36.06:0,36,494	0/0:16,0:16:42.06:0,42,579	0/0:20,0:20:56.70:0,57,718	0/0:15,0:15:35.33:0,35,513	0/0:8,0:8:23.87:0,24,344	0/0:28,0:27:69.07:0,69,935	1/1:15,0:13:18.72:86,19,0	0/1:11,0:9:16.74:42,0,17	0/1:14,0:14:17.32:17,0,29	0/1:13,0:13:14.08:60,0,14	0/0:16,0:16:48.03:0,48,710	0/0:15,0:15:36.06:0,36,492	0/0:18,0:18:51.02:0,51,731	0/0:32,0:32:75.06:0,75,1066	0/1:20,0:20:5.46:152,0,5	1/1:20,0:18:19.24:161,19,0	0/1:3,0:3:0.86:10,0,1
chr10	69129013	.	A	AC	3067.91	PASS	AB=1.000;AC=25;AF=0.446;AN=56;BaseQRankSum=0.836;DP=414;FS=1.943;HRun=1;HaplotypeScore=59.0848;InbreedingCoeff=0.8219;MQ=53.16;MQ0=10;MQRankSum=-3.085;QD=14.34;ReadPosRankSum=1.674;VQSLOD=3.1094;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:18,0:16:32.41:83,0,32	0/0:14,0:14:38.85:0,39,377	0/1:7,0:6:1.86:2,0,29	0/1:6,0:4:0:0,0,0	1/1:23,1:24:42.76:215,43,0	0/0:15,0:15:31:0,31,319	0/0:15,0:12:35.60:0,36,307	1/1:5,15:20:55.23:558,55,0	0/0:17,0:17:35.67:0,36,287	1/1:10,6:15:44.82:439,45,0	1/1:1,12:13:8.39:94,8,0	0/0:17,0:16:40.68:0,41,331	0/0:12,0:12:27.29:0,27,253	0/0:8,0:8:15.64:0,16,106	0/0:11,0:11:23.96:0,24,225	0/0:11,0:11:29.95:0,30,306	0/0:19,0:19:33.92:0,34,207	1/1:10,7:13:24.35:281,24,0	1/1:6,18:21:53.13:481,53,0	1/1:16,6:21:47.01:385,47,0	1/1:3,1:4:5.23:44,5,0	0/0:16,0:16:41.50:0,42,356	0/0:16,0:16:35.48:0,35,294	0/0:15,0:14:20.19:0,20,190	0/0:13,0:13:29.95:0,30,286	1/1:15,3:16:47.69:409,48,0	1/1:9,6:13:14.77:213,15,0	1/1:7,0:6:11.76:76,12,0
chr10	69129076	.	G	GCACTTAGC	12884.56	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-3.120;DP=458;FS=8.400;HRun=0;HaplotypeScore=130.2610;InbreedingCoeff=0.9935;MQ=73.65;MQ0=0;MQRankSum=-13.727;QD=93.37;ReadPosRankSum=-2.623;VQSLOD=4.7447;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:45.15:0,45,1137	0/0:9,0:9:27.09:0,27,684	0/0:24,0:24:44.30:0,44,1653	0/0:15,0:15:25.12:0,25,798	0/0:17,0:16:48.02:0,48,1193	0/0:13,0:13:30.10:0,30,745	0/0:29,0:29:84.27:0,84,2301	1/1:4,4:13:39.11:1056,39,0	0/0:12,0:12:33.11:0,33,838	1/1:9,14:22:60.19:2626,60,0	1/1:5,6:11:23.60:993,24,0	0/0:18,0:18:54.14:0,54,1316	0/0:17,0:17:48.15:0,48,1293	0/0:15,0:15:39.13:0,39,1058	0/0:18,0:18:42.14:0,42,1127	0/0:22,0:22:60.21:0,60,1683	0/0:24,0:24:57.17:0,57,1485	1/1:4,3:8:21.03:663,21,0	1/1:5,2:9:24.08:868,24,0	1/1:10,5:18:50.80:1116,51,0	1/1:8,6:14:32.79:715,33,0	0/0:11,0:11:33.11:0,33,845	0/0:14,0:14:30.10:0,30,706	0/0:27,0:27:75.26:0,75,1981	0/0:17,0:17:51.18:0,51,1289	1/1:9,9:18:54.19:2290,54,0	1/1:2,17:18:51.13:2057,51,0	1/1:1,3:4:12.04:500,12,0
chr10	69130497	.	GCT	G	166.20	PASS	AB=0.968;AC=18;AF=0.346;AN=52;BaseQRankSum=2.959;DP=768;FS=11.206;HRun=0;HaplotypeScore=99.3111;InbreedingCoeff=0.2244;MQ=63.41;MQ0=33;MQRankSum=0.395;QD=0.56;ReadPosRankSum=3.242;VQSLOD=1.2042;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:34:2.84:14,3,0	0/0:12,0:12:6.02:0,6,86	./.	./.	1/1:18,0:21:2.74:14,3,0	0/1:20,0:21:12.91:13,0,142	0/1:24,2:26:8.08:8,0,282	0/0:36,0:35:29.94:0,30,288	0/1:27,1:27:14.03:14,0,183	1/1:34,0:34:8.52:42,9,0	1/1:17,0:17:5.68:28,6,0	0/0:26,0:27:6.93:0,7,229	0/0:20,0:20:15.05:0,15,217	0/0:18,0:18:6.02:0,6,86	0/0:24,0:24:15.05:0,15,218	0/1:22,1:23:20.04:20,0,101	0/1:18,1:21:17.03:17,0,142	0/0:9,0:9:3.94:0,4,28	0/0:25,0:24:6:0,6,58	0/0:31,0:31:3.95:0,4,45	0/0:18,0:18:3:0,3,26	0/0:24,0:24:12:0,12,112	1/1:25,3:28:6.01:64,6,0	1/1:17,2:19:6.01:62,6,0	0/1:24,0:24:27.92:28,0,177	0/0:26,0:25:13.28:0,13,149	0/0:23,0:22:9.91:0,10,77	0/0:20,0:18:9.44:0,9,81
chr10	69131007	.	CCTTTTTTT	C	4261.15	PASS	AB=1.000;AC=22;AF=0.393;AN=56;BaseQRankSum=4.000;DP=416;FS=6.980;HRun=0;HaplotypeScore=91.9323;InbreedingCoeff=0.8395;MQ=63.35;MQ0=5;MQRankSum=-1.804;QD=22.31;ReadPosRankSum=0.573;VQSLOD=3.5456;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:67.45:0,67,1766	0/0:7,0:7:16.84:0,17,362	0/0:32,0:9:26.87:0,27,346	0/1:16,0:6:17.20:17,0,68	0/0:15,0:15:38.08:0,38,605	0/0:7,0:8:21.05:0,21,540	0/0:21,0:21:58.61:0,59,1038	1/1:2,14:18:40.49:635,40,0	0/0:16,0:16:42.05:0,42,890	1/1:27,3:30:67.43:879,67,0	1/1:19,0:19:41.98:356,42,0	0/0:11,0:11:32.16:0,32,660	0/0:8,0:8:19.75:0,20,445	0/1:12,0:12:99:109,0,118	0/0:9,0:9:26.30:0,26,860	0/0:13,0:12:28.75:0,29,552	0/0:14,0:14:34.56:0,35,724	1/1:18,1:19:23.44:415,23,0	1/1:15,0:15:44.91:375,45,0	1/1:11,0:11:31.95:297,32,0	1/1:13,0:13:27.66:278,28,0	0/0:8,0:8:17.27:0,17,423	0/0:4,0:4:12:0,12,183	0/0:20,0:20:54.59:0,55,1694	0/0:15,0:13:35.72:0,36,836	1/1:17,0:17:50.93:443,51,0	1/1:12,1:14:16.77:320,17,0	1/1:7,0:7:18.62:138,19,0
chr10	69132731	.	CAAA	C	2539.25	PASS	AB=0.626;AC=18;AF=0.321;AN=56;BaseQRankSum=4.016;DP=586;FS=8.346;HRun=15;HaplotypeScore=103.7219;InbreedingCoeff=0.8624;MQ=68.40;MQ0=0;MQRankSum=-3.945;QD=13.58;ReadPosRankSum=3.026;VQSLOD=1.8452;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:46:99:0,100,797	0/0:11,0:13:21.05:0,21,328	0/0:17,0:15:14.34:0,14,232	0/0:16,0:16:11.11:0,11,99	0/0:10,0:25:56.02:0,56,504	0/0:18,0:20:48.16:0,48,856	0/0:23,0:26:60.14:0,60,964	1/1:12,13:23:34.24:401,34,0	0/0:17,0:19:42.14:0,42,712	0/1:9,1:24:5.45:5,0,79	0/1:9,2:21:4.12:4,0,70	0/0:20,0:24:57.12:0,57,856	0/0:14,0:18:36.09:0,36,555	0/0:24,0:24:66.13:0,66,1055	0/0:22,0:27:66.16:0,66,1053	0/0:12,0:19:42.06:0,42,588	0/0:19,0:20:51.13:0,51,875	1/1:3,8:11:24.01:269,24,0	1/1:3,7:10:23.99:269,24,0	1/1:4,12:18:34.10:369,34,0	1/1:5,19:26:23.53:312,24,0	0/0:24,0:24:51.17:0,51,922	0/0:9,0:13:30.06:0,30,458	0/0:27,0:34:77.69:0,78,1226	0/0:12,0:13:36.10:0,36,601	1/1:12,10:26:40.29:436,40,0	1/1:4,16:21:47.94:512,48,0	1/1:1,4:5:15.04:168,15,0
chr10	69132787	.	CCCCTGG	C	10173.46	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=15.029;DP=684;FS=8.024;HRun=0;HaplotypeScore=166.2254;InbreedingCoeff=0.9940;MQ=82.65;MQ0=0;MQRankSum=-17.050;QD=47.76;ReadPosRankSum=-2.602;VQSLOD=3.5338;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,135,4556	0/0:11,0:11:27.09:0,27,927	0/0:24,0:24:56.93:0,57,1652	0/0:32,0:32:75.26:0,75,2198	0/0:19,0:19:48.15:0,48,1493	0/0:17,0:17:51.18:0,51,1739	0/0:34,0:34:99:0,99,3300	1/1:11,20:31:60.20:1320,60,0	0/0:31,0:31:93.32:0,93,3174	1/1:5,25:30:75.26:1654,75,0	1/1:3,16:19:41.95:896,42,0	0/0:37,0:37:99:0,99,3300	0/0:20,0:20:54.19:0,54,1853	0/0:26,0:26:72.25:0,72,2471	0/0:34,0:34:99:0,99,3177	0/0:23,0:23:66.23:0,66,2262	0/0:22,0:22:60.16:0,60,1878	1/1:4,7:11:18.06:402,18,0	1/1:2,12:14:33.11:737,33,0	1/1:6,19:25:46.10:1008,46,0	1/1:8,14:22:36.59:805,37,0	0/0:18,0:18:51.16:0,51,1622	0/0:17,0:17:45.15:0,45,1543	0/0:32,0:32:84.28:0,84,2786	0/0:21,0:21:54.19:0,54,1784	1/1:1,26:27:75.19:1676,75,0	1/1:5,24:29:66.21:1407,66,0	1/1:1,4:5:12.04:268,12,0
chr10	69136042	.	AATCC	A	7172.65	PASS	AB=0.846;AC=17;AF=0.304;AN=56;BaseQRankSum=13.242;DP=840;FS=0.345;HRun=0;HaplotypeScore=170.9226;InbreedingCoeff=0.8957;MQ=54.91;MQ0=10;MQRankSum=-6.003;QD=26.96;ReadPosRankSum=-1.944;VQSLOD=4.4348;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:31:72.19:0,72,1681	0/0:5,0:5:9.03:0,9,219	0/0:34,0:21:27.02:0,27,474	0/0:51,0:30:27.25:0,27,599	0/0:35,0:35:84.28:0,84,1956	0/0:39,0:39:80.64:0,81,1860	0/0:27,0:27:51.13:0,51,1184	1/1:18,11:29:36.09:551,36,0	0/0:37,0:37:81.26:0,81,1920	1/1:8,33:41:96.33:1564,96,0	1/1:10,20:30:54.14:856,54,0	0/0:29,0:29:75.26:0,75,1807	0/0:34,0:34:81.28:0,81,1965	0/0:29,0:29:48.16:0,48,1151	0/0:31,0:31:69.24:0,69,1677	0/0:31,0:31:72.23:0,72,1699	0/0:35,0:35:79.99:0,80,1882	0/0:29,0:29:67.43:0,67,1544	1/1:8,5:12:21.04:315,21,0	1/1:14,25:39:72.16:1109,72,0	0/1:27,6:33:52.83:295,0,53	0/0:29,0:29:72.23:0,72,1701	0/0:18,0:18:45.15:0,45,1093	0/0:20,0:19:44.89:0,45,998	0/0:28,0:28:75.26:0,75,1830	1/1:8,18:25:57.19:911,57,0	1/1:15,31:46:96.20:1425,96,0	1/1:6,3:9:9.03:147,9,0
chr10	69136073	.	AATCC	A	6462.29	PASS	AB=0.651;AC=13;AF=0.232;AN=56;BaseQRankSum=13.517;DP=816;FS=5.418;HRun=0;HaplotypeScore=178.0385;InbreedingCoeff=0.6629;MQ=53.33;MQ0=8;MQRankSum=-11.507;QD=31.07;ReadPosRankSum=-0.893;VQSLOD=4.3972;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:34:60.11:0,60,1353	0/0:5,0:5:9.03:0,9,195	0/0:37,0:13:4.11:0,4,446	0/0:30,0:20:33.07:0,33,691	0/0:39,0:39:90.30:0,90,2161	0/0:37,0:37:93.32:0,93,2306	0/0:22,0:22:54.15:0,54,1145	1/1:15,15:30:45.07:678,45,0	0/0:31,0:31:84.25:0,84,1922	0/0:47,0:47:99:0,117,2819	0/0:29,0:29:72.25:0,72,1791	0/0:27,0:27:69.24:0,69,1703	0/0:38,0:38:99:0,99,2336	0/0:24,0:24:60.21:0,60,1498	0/0:29,0:29:84.28:0,84,1987	0/0:31,0:31:81.28:0,81,1967	0/0:41,0:41:86.40:0,86,1970	1/1:8,20:28:16.37:863,16,0	0/1:4,7:11:49.95:331,0,50	1/1:10,26:36:84.24:1393,84,0	0/1:19,12:30:18.77:585,0,19	0/0:41,0:41:99:0,99,2288	0/0:16,0:16:33.11:0,33,824	0/0:19,0:18:33.64:0,34,1041	0/0:28,0:28:63.21:0,63,1434	0/1:11,17:27:14.76:899,0,15	1/1:10,30:40:93.30:1548,93,0	1/1:2,2:4:12.03:166,12,0
chr10	69136162	.	TCATA	T	7483.85	PASS	AB=0.935;AC=29;AF=0.518;AN=56;BaseQRankSum=14.074;DP=769;FS=6.378;HRun=0;HaplotypeScore=153.6245;InbreedingCoeff=0.9059;MQ=62.00;MQ0=1;MQRankSum=-1.331;QD=19.04;ReadPosRankSum=-0.568;VQSLOD=3.9855;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:23:9.93:70,10,0	0/0:12,0:12:18.06:0,18,427	0/0:25,0:21:18.06:0,18,335	0/0:31,0:24:11.63:0,12,198	1/1:11,0:19:18.34:159,18,0	0/0:33,0:34:69.04:0,69,1582	0/0:19,0:19:33.11:0,33,760	1/1:29,10:39:30.06:417,30,0	0/0:32,0:32:72.25:0,72,1705	1/1:22,0:35:30.03:279,30,0	1/1:7,0:20:14.96:127,15,0	0/0:27,1:28:15.45:0,15,1380	0/0:32,0:32:60.21:0,60,1374	0/0:36,0:36:72.23:0,72,1667	0/0:30,0:30:63.22:0,63,1480	0/0:37,0:37:63.22:0,63,1495	0/1:27,2:29:35.32:35,0,1201	1/1:10,9:19:33.11:525,33,0	1/1:11,3:14:18.06:287,18,0	1/1:13,27:40:72.16:1056,72,0	1/1:20,18:38:63.15:935,63,0	0/0:34,0:34:54.18:0,54,1239	1/1:6,10:16:21.07:334,21,0	1/1:7,18:25:39.13:608,39,0	0/0:26,0:26:54.17:0,54,1238	1/1:6,29:36:87.25:1315,87,0	1/1:7,27:34:69.24:1099,69,0	1/1:1,5:6:15.05:239,15,0
chr10	69136665	.	T	TA	1175.64	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-3.810;DP=630;FS=0.599;HRun=8;HaplotypeScore=62.7908;InbreedingCoeff=0.9553;MQ=74.62;MQ0=0;MQRankSum=1.036;QD=26.13;ReadPosRankSum=0.350;VQSLOD=4.2919;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,114,1034	0/0:16,0:16:45.02:0,45,412	0/0:18,0:17:14.48:0,14,117	0/0:14,0:12:8.03:0,8,115	0/0:24,0:24:65.99:0,66,594	0/0:24,0:24:66.03:0,66,604	0/0:15,0:15:42:0,42,378	0/0:22,0:22:54:0,54,484	0/0:12,0:12:29.99:0,30,269	1/1:4,23:27:72.19:811,72,0	1/1:3,15:18:42.12:486,42,0	0/0:21,0:21:62.62:0,63,554	0/0:17,0:17:48:0,48,430	0/0:26,0:26:63.01:0,63,569	0/0:25,0:25:65.99:0,66,591	0/0:15,0:15:33:0,33,297	0/0:29,0:29:84.01:0,84,757	0/0:19,0:19:50.98:0,51,455	0/0:17,0:17:42.01:0,42,381	0/0:34,0:34:93.03:0,93,847	0/0:25,0:25:59.88:0,60,525	0/0:32,0:32:86.95:0,87,781	0/0:20,0:20:53.93:0,54,479	0/0:22,0:22:66.04:0,66,604	0/0:27,0:27:69.03:0,69,628	0/0:31,0:31:87.04:0,87,796	0/0:22,0:22:63:0,63,566	0/0:13,0:12:33.02:0,33,302
chr10	69137191	.	CCAGGTT	C	2314.30	PASS	AB=0.958;AC=5;AF=0.089;AN=56;BaseQRankSum=9.556;DP=660;FS=4.997;HRun=0;HaplotypeScore=135.4453;InbreedingCoeff=0.8286;MQ=81.71;MQ0=0;MQRankSum=-7.183;QD=37.94;ReadPosRankSum=-1.128;VQSLOD=2.9448;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,129,4540	0/0:12,0:12:36.12:0,36,1318	0/0:17,0:17:40:0,40,1387	0/0:19,0:19:42.37:0,42,1635	0/0:24,0:24:72.25:0,72,2577	0/0:18,0:16:54.17:0,54,1761	0/0:37,0:37:99:0,108,3681	0/0:20,0:20:60.20:0,60,1919	0/0:31,0:31:90.31:0,90,3269	1/1:2,21:23:60.16:1327,60,0	1/1:0,15:15:45.15:1107,45,0	0/0:30,0:30:87.30:0,87,3094	0/0:18,0:18:54.17:0,54,1893	0/0:23,0:23:69.24:0,69,2528	0/0:26,0:26:78.27:0,78,2778	0/0:16,0:16:45.15:0,45,1647	0/0:23,0:23:69.24:0,69,2505	0/0:25,0:25:75.26:0,75,2625	0/0:22,0:22:66.23:0,66,2327	0/0:23,0:23:69.24:0,69,2450	0/0:49,0:49:99:0,144,4991	0/0:20,0:20:60.20:0,60,2109	0/0:23,0:23:69.24:0,69,2500	0/0:27,0:27:81.28:0,81,2882	0/0:21,0:21:63.22:0,63,2269	0/1:22,1:23:4.62:5,0,2350	0/0:21,0:21:60.21:0,60,2182	0/0:11,0:11:33.11:0,33,1209
chr10	69137815	.	A	AT	1314.40	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=-4.837;DP=600;FS=0.000;HRun=8;HaplotypeScore=70.0961;InbreedingCoeff=0.7794;MQ=78.29;MQ0=3;MQRankSum=0.535;QD=14.94;ReadPosRankSum=-1.743;VQSLOD=3.2749;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,105,955	0/0:17,0:17:51.01:0,51,462	0/0:42,0:27:45.95:0,46,447	0/1:38,0:27:21.96:22,0,194	0/0:32,0:32:87.05:0,87,796	0/0:22,0:22:63.01:0,63,571	0/0:16,0:16:41.99:0,42,377	0/0:23,0:24:53.05:0,53,470	0/0:20,0:20:54.01:0,54,489	1/1:3,29:32:84.21:937,84,0	1/1:3,14:16:42.12:485,42,0	0/0:11,0:11:30:0,30,270	0/0:13,0:13:27:0,27,247	0/0:19,0:19:54.03:0,54,493	0/0:16,0:16:42.02:0,42,384	0/0:8,0:8:23.97:0,24,209	0/0:22,0:22:57.03:0,57,521	0/0:26,0:26:72.04:0,72,659	0/0:22,0:22:54.02:0,54,494	0/0:20,0:20:57.03:0,57,521	0/0:8,0:8:24.01:0,24,220	0/0:15,0:15:33.01:0,33,302	0/0:17,0:17:48.02:0,48,439	0/0:16,0:16:45:0,45,405	0/0:30,0:30:84.01:0,84,759	0/0:26,0:26:66.02:0,66,604	0/0:18,0:18:48.03:0,48,439	0/0:14,0:14:42.02:0,42,384
chr10	69138849	.	TGTGA	T	872.05	PASS	AB=0.985;AC=21;AF=0.420;AN=50;BaseQRankSum=5.329;DP=565;FS=23.267;HRun=0;HaplotypeScore=130.6317;InbreedingCoeff=-0.3862;MQ=47.54;MQ0=18;MQRankSum=1.602;QD=2.15;ReadPosRankSum=0.340;VQSLOD=0.7349;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:25:4.08:0,4,45	0/1:8,0:8:0.32:0,0,100	./.	./.	./.	0/1:24,0:22:38.83:39,0,189	0/0:30,0:28:20.35:0,20,270	0/1:29,0:28:0.54:1,0,61	0/1:25,0:24:54.08:54,0,323	0/0:14,0:14:21.63:0,22,125	0/0:15,0:15:11.02:0,11,94	0/1:33,0:33:30.91:31,0,356	0/1:23,0:23:26.61:27,0,344	0/0:29,0:28:18.59:0,19,347	0/1:28,0:28:8.54:9,0,377	0/0:21,0:21:24.07:0,24,393	0/1:18,9:25:11.97:12,0,365	0/1:7,0:7:27.49:27,0,55	0/1:14,0:13:34.89:35,0,152	0/1:19,0:18:18.30:18,0,101	0/1:18,0:16:13.44:34,0,13	0/1:21,0:21:9.95:10,0,258	0/1:16,0:16:91.66:92,0,104	1/1:42,0:38:57.58:422,58,0	0/1:21,0:21:39.50:40,0,213	0/1:19,0:18:36.81:37,0,150	0/1:18,0:17:46.83:76,0,47	1/1:13,0:13:0.74:57,1,0
chr10	69138874	.	GAGAGAGAGAGAGAGTA	G	30.90	PASS	AB=0.786;AC=2;AF=0.036;AN=56;BaseQRankSum=3.930;DP=602;FS=1.339;HRun=0;HaplotypeScore=235.5642;InbreedingCoeff=0.0314;MQ=52.15;MQ0=23;MQRankSum=2.554;QD=0.94;ReadPosRankSum=-3.947;VQSLOD=2.2252;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:13:2.26:0,2,7	0/0:11,0:11:30.10:0,30,1480	0/0:29,0:11:32.94:0,33,946	0/0:17,0:5:9.50:0,10,354	0/0:15,0:15:2:0,2,20	0/0:23,0:21:53.71:0,54,3022	0/0:35,0:33:56.49:0,56,2389	0/0:27,0:27:72.54:0,73,1711	0/0:34,0:33:81.41:0,81,3686	0/1:5,15:20:16.51:48,0,17	0/1:13,0:13:21.67:71,0,22	0/0:32,0:32:92.32:0,92,4881	0/0:25,0:25:72.25:0,72,4161	0/0:30,0:29:64.52:0,65,2962	0/0:28,0:28:69.14:0,69,3897	0/0:22,0:22:54.19:0,54,2647	0/0:24,0:22:42.14:0,42,2471	0/0:9,0:9:16.30:0,16,513	0/0:11,0:11:21.97:0,22,531	0/0:15,0:14:15.51:0,16,338	0/0:24,0:23:9.19:0,9,252	0/0:17,0:17:36.07:0,36,2033	0/0:20,0:20:48.16:0,48,2360	0/0:38,0:34:63.20:0,63,2887	0/0:18,0:18:36.12:0,36,2344	0/0:18,0:18:46.69:0,47,1014	0/0:21,0:20:21.19:0,21,480	0/0:12,0:10:30.10:0,30,627
chr10	69138945	.	AGT	A	7320.36	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=14.634;DP=921;FS=7.681;HRun=0;HaplotypeScore=137.6349;InbreedingCoeff=0.9990;MQ=57.86;MQ0=17;MQRankSum=-1.814;QD=23.54;ReadPosRankSum=0.655;VQSLOD=5.3331;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,33:35:32.89:420,33,0	0/0:13,0:12:33.10:0,33,526	0/0:42,0:19:33.21:0,33,397	0/0:53,0:27:42.19:0,42,573	1/1:6,18:24:57.12:710,57,0	0/0:13,0:13:30.09:0,30,470	0/0:36,0:36:84.27:0,84,1366	1/1:9,20:28:51.11:617,51,0	0/0:40,0:40:99:0,105,1712	0/0:42,0:41:99:0,111,1787	0/0:21,0:21:45.10:0,45,675	0/0:38,0:38:99:0,99,1625	0/0:31,0:31:78.22:0,78,1218	0/0:37,0:37:99:0,102,1673	0/0:47,0:47:78.69:0,79,1809	0/0:40,1:41:79.18:0,79,1790	0/0:30,0:30:34.07:0,34,1064	1/1:1,24:25:39.17:686,39,0	1/1:5,22:25:66.20:819,66,0	1/1:4,16:19:48.15:611,48,0	1/1:10,58:66:92.93:1183,93,0	0/0:24,0:24:66.20:0,66,1076	0/0:22,0:22:48.16:0,48,803	0/0:48,0:48:99:0,111,1828	0/0:30,0:30:84.29:0,84,1381	1/1:3,37:40:99:1329,108,0	1/1:3,26:29:50.76:645,51,0	1/1:3,8:11:19.81:299,20,0
chr10	69139025	.	A	AGT	2293.38	PASS	AB=0.986;AC=11;AF=0.196;AN=56;BaseQRankSum=15.942;DP=859;FS=2.573;HRun=0;HaplotypeScore=201.2119;InbreedingCoeff=-0.1297;MQ=62.41;MQ0=5;MQRankSum=-14.539;QD=7.85;ReadPosRankSum=-4.622;VQSLOD=2.7163;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:42,4:44:0:460,0,0	0/0:21,0:21:60.18:0,60,821	0/0:47,0:42:99:0,112,1447	0/0:58,0:52:99:0,125,1604	0/1:32,0:32:99:354,0,202	0/0:22,0:22:66.21:0,66,901	0/0:33,0:33:93.28:0,93,1253	0/1:42,0:41:99:332,0,1064	0/0:40,0:40:99:0,102,1387	0/0:21,0:21:14.43:0,14,317	0/1:20,0:20:99:106,0,197	0/0:35,0:35:99:0,99,1386	0/0:37,0:37:99:0,99,1323	0/0:36,0:36:93.30:0,93,1284	0/0:26,0:26:72.24:0,72,1008	0/0:27,0:27:72.21:0,72,968	0/0:26,0:26:63.18:0,63,862	0/1:19,1:20:73.96:74,0,303	0/1:16,1:17:99:165,0,220	0/1:20,0:20:93.16:347,0,93	0/1:45,1:46:99:242,0,406	0/0:29,0:29:81.27:0,81,1134	0/0:29,0:29:84.28:0,84,1176	0/0:51,0:50:99:0,127,1745	0/0:23,0:23:51.14:0,51,678	0/1:24,0:24:99:158,0,267	0/1:25,0:25:99:199,0,195	0/0:5,0:5:1.37:0,1,39
chr10	69139033	.	A	AGTGTGTATGT	17088.68	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-2.733;DP=898;FS=5.139;HRun=0;HaplotypeScore=281.8731;InbreedingCoeff=0.9838;MQ=62.53;MQ0=5;MQRankSum=-13.219;QD=46.95;ReadPosRankSum=-4.652;VQSLOD=3.3217;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:31,14:43:60.30:2107,60,0	0/0:22,0:22:54.13:0,54,1299	0/0:46,0:41:31.40:0,31,905	0/0:55,0:51:23.18:0,23,1719	1/1:10,21:37:37.49:1707,37,0	0/0:23,0:23:60.21:0,60,1741	0/0:32,0:32:72.21:0,72,1924	1/1:50,0:50:60.02:1327,60,0	0/0:42,0:42:99:0,114,2891	1/1:7,12:35:57.11:2151,57,0	1/1:9,12:26:20.16:1009,20,0	0/0:38,0:38:90.28:0,90,2609	0/0:37,0:37:93.26:0,93,2397	0/0:33,0:33:81.25:0,81,2322	0/0:27,0:27:66.18:0,66,1774	0/0:26,0:26:57.14:0,57,1383	0/0:23,0:23:51.15:0,51,1434	1/1:13,4:17:24.08:921,24,0	1/1:15,4:19:33.49:1076,33,0	1/1:7,16:29:27.09:1158,27,0	1/1:40,5:45:49.41:1209,49,0	0/0:30,0:30:75.23:0,75,2049	0/0:29,0:29:72.23:0,72,2114	0/0:46,0:45:96.85:0,97,2660	0/0:24,0:24:54.60:0,55,1231	1/1:15,12:27:57.17:2329,57,0	1/1:16,8:25:45.12:1790,45,0	1/1:1,5:9:6.02:304,6,0
chr10	69139465	.	TC	T	8998.25	PASS	AB=0.545;AC=19;AF=0.339;AN=56;BaseQRankSum=16.032;DP=677;FS=3.897;HRun=1;HaplotypeScore=81.9181;InbreedingCoeff=0.9155;MQ=87.10;MQ0=0;MQRankSum=-6.357;QD=38.45;ReadPosRankSum=-0.542;VQSLOD=5.1256;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,29:29:84.24:1150,84,0	0/0:14,0:14:42.13:0,42,647	0/0:27,0:27:69.07:0,69,1016	0/0:25,0:25:62.88:0,63,949	1/1:0,29:29:78.17:1042,78,0	0/0:16,0:16:48.15:0,48,743	0/0:26,0:26:78.27:0,78,1244	1/1:0,37:37:99:1477,108,0	0/0:24,0:24:72.22:0,72,1102	0/0:36,0:36:99:0,108,1666	0/0:23,0:23:69.21:0,69,1057	0/0:28,0:28:84.27:0,84,1319	0/0:21,0:21:63.20:0,63,983	0/0:24,0:24:72.23:0,72,1127	0/0:20,0:20:60.19:0,60,936	0/0:25,0:25:75.21:0,75,1130	0/0:25,0:25:75.22:0,75,1146	1/1:1,13:14:39.10:524,39,0	1/1:0,22:22:66.21:909,66,0	1/1:2,28:30:90.29:1237,90,0	1/1:1,18:19:51.15:696,51,0	0/0:22,0:22:66.23:0,66,1055	0/0:32,0:32:96.31:0,96,1511	0/0:23,0:23:69.19:0,69,1075	0/0:32,0:32:96.33:0,96,1533	0/1:5,25:30:53.46:1042,0,53	1/1:0,19:19:54.18:754,54,0	1/1:0,4:4:12.04:168,12,0
chr10	69139517	.	C	CTCT	12141.38	PASS	AB=0.574;AC=19;AF=0.339;AN=56;BaseQRankSum=-4.053;DP=714;FS=0.643;HRun=0;HaplotypeScore=108.5992;InbreedingCoeff=0.9195;MQ=84.41;MQ0=0;MQRankSum=-10.001;QD=48.96;ReadPosRankSum=-3.247;VQSLOD=5.8203;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,27:33:54.19:1178,54,0	0/0:11,0:11:30.09:0,30,457	0/0:22,0:22:60.20:0,60,957	0/0:30,0:30:78.20:0,78,1174	1/1:4,21:25:60.20:1243,60,0	0/0:18,0:18:51.17:0,51,833	0/0:27,0:27:78.22:0,78,1235	1/1:7,27:35:90.31:1943,90,0	0/0:21,0:21:60.19:0,60,951	0/0:29,0:29:87.29:0,87,1395	0/0:25,0:25:75.26:0,75,1225	0/0:32,0:32:96.33:0,96,1565	0/0:30,0:30:90.31:0,90,1470	0/0:28,0:28:75.26:0,75,1225	0/0:28,0:28:81.28:0,81,1323	0/0:24,0:24:63.20:0,63,1005	0/0:30,0:30:84.26:0,84,1346	1/1:2,14:16:39.13:871,39,0	1/1:17,7:24:48.16:982,48,0	1/1:2,24:27:69.24:1538,69,0	1/1:3,15:18:36.12:711,36,0	0/0:28,0:28:78.27:0,78,1274	0/0:22,0:22:63.21:0,63,1025	0/0:30,0:30:81.26:0,81,1279	0/0:31,0:31:90.31:0,90,1464	0/1:8,22:31:16.74:1549,0,17	1/1:3,29:32:84.29:1844,84,0	1/1:2,4:6:15.05:282,15,0
chr10	69141290	.	CTCTTCCTCT	C	323.21	PASS	AB=0.990;AC=15;AF=0.288;AN=52;BaseQRankSum=1.412;DP=301;FS=2.395;HRun=0;HaplotypeScore=73.0560;InbreedingCoeff=0.2509;MQ=26.54;MQ0=48;MQRankSum=0.317;QD=2.86;ReadPosRankSum=-2.181;VQSLOD=1.4306;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:11,0:6:8.12:40,0,8	0/0:7,0:4:9.03:0,9,172	./.	./.	1/1:9,0:9:11.75:111,12,0	0/0:13,0:12:21.07:0,21,401	0/0:16,0:10:17.97:0,18,248	1/1:6,4:4:10.14:63,10,0	0/0:18,0:11:21.02:0,21,305	0/1:13,0:10:61.03:61,0,69	0/0:13,0:12:8.28:0,8,64	0/0:10,0:10:27.97:0,28,454	0/0:12,0:10:18.06:0,18,329	0/0:10,0:8:18.02:0,18,282	0/0:14,0:9:27.09:0,27,456	0/0:10,0:9:21.07:0,21,376	0/0:7,0:7:12.04:0,12,187	0/1:6,0:4:28.35:48,0,28	0/1:9,0:4:18.49:34,0,18	0/1:13,0:10:10.59:18,0,11	1/1:9,0:3:5.75:30,6,0	0/0:14,0:13:21.02:0,21,301	0/0:15,0:9:27.07:0,27,411	0/0:4,0:1:3.01:0,3,38	0/0:13,0:7:6.02:0,6,112	1/1:11,0:5:5.96:44,6,0	0/1:8,0:6:14.34:14,0,15	0/1:12,0:12:22.40:22,0,76
chr10	69141296	.	CTCT	C	231.25	PASS	AB=1.000;AC=21;AF=0.404;AN=52;BaseQRankSum=6.052;DP=291;FS=0.000;HRun=0;HaplotypeScore=50.1189;InbreedingCoeff=0.5747;MQ=25.44;MQ0=43;MQRankSum=0.833;QD=1.99;ReadPosRankSum=-3.226;VQSLOD=0.5061;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:6:8.81:53,9,0	0/0:7,0:4:9.03:0,9,181	./.	./.	1/1:9,0:8:6:53,6,0	0/0:13,0:12:21.07:0,21,421	0/0:17,0:10:17.81:0,18,265	1/1:9,0:4:4.78:13,5,0	0/0:17,0:10:7.70:0,8,282	1/1:15,1:12:14.69:106,15,0	1/1:11,2:10:0.52:2,1,0	0/0:11,0:10:8.17:0,8,411	0/0:9,0:7:18.06:0,18,352	0/0:10,0:8:18.02:0,18,305	0/0:14,0:10:27.09:0,27,503	0/0:11,0:10:24.08:0,24,450	0/0:5,0:5:12.04:0,12,220	1/1:6,0:4:3.58:33,4,0	1/1:8,0:3:3.36:20,3,0	1/1:14,0:10:7.99:33,8,0	0/1:8,0:2:0:1,0,0	0/0:12,0:11:20.57:0,21,298	0/0:16,0:9:22.84:0,23,396	0/0:4,0:1:3.01:0,3,37	0/0:15,0:8:6.02:0,6,119	1/1:8,1:4:3.86:50,4,0	0/1:5,0:5:11.90:12,0,14	0/1:7,0:8:9.61:21,0,10
chr10	69141401	.	TTCC	T	54.40	PASS	AB=0.929;AC=7;AF=0.500;AN=14;BaseQRankSum=1.524;DP=251;FS=0.000;HRun=0;HaplotypeScore=20.6879;MQ=14.30;MQ0=105;MQRankSum=-1.406;QD=1.21;ReadPosRankSum=0.068;VQSLOD=0.8047;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	1/1:10,1:6:8.94:65,9,0	./.	./.	./.	./.	0/0:21,0:5:2.97:0,3,20	./.	./.	./.	./.	./.	0/0:8,0:4:6.02:0,6,102	./.	./.	./.	0/1:12,1:9:11.87:12,0,38	./.	0/0:16,0:7:6.02:0,6,99	1/1:18,0:10:3.79:18,4,0	./.	./.	./.	./.	1/1:2,1:3:3.01:45,3,0
chr10	69141551	.	C	CTCT	47.11	PASS	AB=0.885;AC=12;AF=0.375;AN=32;BaseQRankSum=0.173;DP=243;FS=2.644;HRun=0;HaplotypeScore=17.8673;InbreedingCoeff=0.3542;MQ=25.64;MQ0=91;MQRankSum=-2.486;QD=0.92;ReadPosRankSum=-2.601;VQSLOD=0.3302;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/0:4,0:2:3.01:0,3,37	./.	./.	1/1:8,0:7:0.47:1,0,0	./.	./.	./.	0/0:14,0:10:8.96:0,9,72	0/0:6,0:2:2.37:0,2,8	1/1:6,0:2:2.90:16,3,0	./.	0/0:12,0:6:2.98:0,3,21	1/1:7,1:5:3.01:51,3,0	0/0:12,0:9:6.02:0,6,74	0/1:6,0:5:0:0,0,0	./.	./.	./.	1/1:6,0:5:4.19:21,4,0	./.	0/1:7,3:9:6.35:44,0,6	0/0:9,0:4:3.01:0,3,37	0/0:11,0:9:8.69:0,9,109	0/0:17,0:16:15.02:0,15,166	0/0:6,0:2:2.98:0,3,22	./.	1/1:6,0:2:2.92:17,3,0
chr10	69141626	.	CTCT	C	142.24	PASS	AB=0.985;AC=12;AF=0.250;AN=48;BaseQRankSum=7.045;DP=477;FS=3.388;HRun=0;HaplotypeScore=63.7540;InbreedingCoeff=0.1679;MQ=30.49;MQ0=97;MQRankSum=-6.643;QD=0.79;ReadPosRankSum=0.937;VQSLOD=1.2292;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:7:1.74:0,2,12	0/0:7,0:6:15.05:0,15,261	./.	./.	0/0:5,0:2:0:0,0,0	0/0:11,1:7:6:0,6,104	0/0:24,0:14:9.03:0,9,157	./.	0/1:33,0:26:9.83:10,0,560	0/1:14,1:10:8.81:9,0,42	0/1:11,0:10:14.41:14,0,61	0/0:21,0:11:1.42:0,1,238	0/0:22,0:15:24.01:0,24,341	0/0:20,0:14:23.84:0,24,338	0/0:21,0:15:30.09:0,30,491	0/0:16,0:10:21.07:0,21,349	0/1:34,0:15:60.03:60,0,76	0/0:14,1:4:3.01:0,3,34	./.	0/1:7,0:4:8.71:9,0,15	1/1:32,3:19:10.91:82,11,0	0/0:17,0:12:9.64:0,10,300	0/0:14,0:9:27.09:0,27,465	0/0:28,5:20:19.61:0,20,326	0/0:14,0:11:14.18:0,14,317	0/1:27,0:17:18.47:31,0,18	1/1:4,0:2:3.01:32,3,0	1/1:9,0:6:6.20:33,6,0
chr10	69141665	.	CTCT	C	77.61	PASS	AB=0.990;AC=11;AF=0.220;AN=50;BaseQRankSum=7.145;DP=1049;FS=1.545;HRun=0;HaplotypeScore=90.7698;InbreedingCoeff=0.0309;MQ=26.64;MQ0=225;MQRankSum=-6.925;QD=0.22;ReadPosRankSum=-1.699;VQSLOD=1.7252;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:64,0:26:11.25:11,0,84	0/1:10,0:8:1.37:1,0,273	./.	./.	1/1:7,0:1:2.74:12,3,0	0/0:31,0:16:15.03:0,15,330	0/0:85,0:39:48.11:0,48,974	./.	0/0:53,1:31:5.01:0,5,743	0/1:55,2:28:9.90:10,0,185	0/1:29,0:16:6.55:7,0,70	0/0:42,0:18:6.68:0,7,494	0/0:44,0:28:30.13:0,30,917	0/0:38,0:23:26.52:0,27,770	0/0:39,0:25:39.11:0,39,790	0/0:36,0:19:30.02:0,30,637	0/1:68,2:32:70.99:71,0,389	0/0:34,0:13:6.02:0,6,91	0/0:28,0:2:2.98:0,3,21	0/1:17,0:7:11.80:12,0,21	0/1:83,1:37:59.31:59,0,149	0/0:21,1:14:30.06:0,30,562	0/0:29,0:18:33.11:0,33,720	0/0:59,0:28:17.57:0,18,400	0/0:22,1:13:19.72:0,20,469	0/0:60,0:27:28.30:0,28,282	1/1:14,0:5:2.70:21,3,0	0/0:9,0:6:2.97:0,3,20
chr10	69141680	.	TTCC	T	75.48	PASS	AB=0.995;AC=11;AF=0.220;AN=50;BaseQRankSum=5.933;DP=1143;FS=1.532;HRun=0;HaplotypeScore=96.5200;InbreedingCoeff=0.0266;MQ=26.33;MQ0=265;MQRankSum=-5.435;QD=0.21;ReadPosRankSum=-1.277;VQSLOD=1.2592;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:68,1:26:11.01:0,11,107	0/0:8,0:6:0.13:0,0,246	./.	./.	1/1:11,1:3:3.01:30,3,0	0/0:36,0:17:18:0,18,312	0/0:95,0:36:45.15:0,45,929	./.	0/0:58,0:35:53.79:0,54,909	0/0:54,0:24:8.05:0,8,133	0/0:27,0:13:8.60:0,9,56	0/0:42,0:20:29.89:0,30,586	0/0:53,0:31:47.52:0,48,915	0/0:47,0:29:47.64:0,48,895	0/0:43,0:28:39.07:0,39,749	0/0:45,0:25:36.11:0,36,630	0/1:74,0:38:42.30:42,0,669	0/1:43,0:19:6.13:6,0,132	0/0:30,0:3:6.02:0,6,74	0/1:25,0:8:11.93:12,0,38	0/1:92,2:38:52.92:53,0,194	0/0:21,0:13:23.94:0,24,443	0/0:33,0:18:32.70:0,33,552	0/0:67,1:31:20.98:0,21,466	0/1:24,0:14:32.35:32,0,412	0/1:57,1:26:5.89:6,0,218	0/1:11,0:5:14.01:16,0,14	1/1:10,0:4:2.22:7,2,0
chr10	69141719	.	T	TTCC	154.85	PASS	AB=0.976;AC=6;AF=0.120;AN=50;BaseQRankSum=4.933;DP=1167;FS=6.743;HRun=0;HaplotypeScore=97.7791;InbreedingCoeff=0.0364;MQ=26.63;MQ0=275;MQRankSum=-3.897;QD=0.65;ReadPosRankSum=-4.061;VQSLOD=-0.2008;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:77,1:35:79.05:79,0,333	0/0:11,0:9:23.90:0,24,308	./.	./.	0/1:12,1:5:20.48:57,0,20	0/0:42,0:19:24:0,24,331	0/0:74,0:30:53.61:0,54,805	./.	0/0:67,0:40:62.09:0,62,836	0/1:47,0:14:1.87:2,0,156	0/0:20,0:8:5.05:0,5,52	0/0:47,0:26:17.81:0,18,601	0/0:53,1:30:53.77:0,54,780	0/0:57,0:33:51.12:0,51,713	0/0:41,0:29:44.97:0,45,638	0/0:46,0:29:50.72:0,51,695	0/0:88,0:46:60:0,60,793	0/0:49,0:20:12.57:0,13,112	1/1:23,0:5:2.37:8,2,0	0/0:20,0:7:2.02:0,2,17	0/0:120,0:49:21:0,21,296	0/0:26,0:15:3.07:0,3,247	0/0:24,0:12:2.88:0,3,15	0/1:77,1:36:91.09:113,0,91	0/0:21,0:12:18.06:0,18,259	0/0:57,0:24:23.77:0,24,270	0/0:12,0:5:2.56:0,3,46	0/0:13,0:4:5.99:0,6,68
chr10	69141737	.	TTCC	T	48.09	PASS	AB=0.964;AC=7;AF=0.146;AN=48;BaseQRankSum=5.129;DP=1172;FS=2.612;HRun=0;HaplotypeScore=105.3782;InbreedingCoeff=0.0623;MQ=26.48;MQ0=298;MQRankSum=-3.970;QD=0.17;ReadPosRankSum=-3.435;VQSLOD=1.4002;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:72,0:35:10.61:11,0,576	0/0:13,0:10:27.09:0,27,555	./.	./.	0/0:14,0:7:3.53:0,4,9	0/0:39,0:18:27.09:0,27,538	0/0:80,0:29:60.21:0,60,1232	./.	0/0:62,0:40:63.19:0,63,1206	0/0:51,0:18:27.09:0,27,439	0/0:18,0:7:2.22:0,2,7	0/0:48,0:24:50.63:0,51,996	0/0:47,0:25:45.15:0,45,914	0/0:61,0:34:56.47:0,56,1004	0/0:41,0:25:54.12:0,54,1012	0/0:48,0:30:51.12:0,51,1000	0/0:90,0:48:77.15:0,77,1216	0/1:39,4:16:92.81:93,0,108	./.	1/1:20,0:8:1.18:3,1,0	0/1:113,2:47:2.17:2,0,387	0/0:34,0:18:33.06:0,33,597	0/1:27,0:13:4.89:5,0,43	0/0:70,0:29:18.92:0,19,205	0/0:26,0:15:21.95:0,22,396	0/0:68,0:28:15.10:0,15,475	0/1:11,1:6:36.14:36,0,122	0/0:13,0:6:15.05:0,15,208
chr10	69141750	.	T	TCTC	709.22	PASS	AB=0.947;AC=11;AF=0.212;AN=52;BaseQRankSum=4.239;DP=1187;FS=16.059;HRun=0;HaplotypeScore=112.7201;InbreedingCoeff=-0.1507;MQ=27.28;MQ0=297;MQRankSum=-3.996;QD=1.32;ReadPosRankSum=-0.451;VQSLOD=1.3414;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:74,0:41:1.51:2,0,585	0/0:13,0:10:27.09:0,27,460	./.	./.	0/0:19,0:11:5.84:0,6,37	0/0:39,0:19:33.11:0,33,556	0/0:84,0:39:84.26:0,84,1345	0/0:43,0:1:3.01:0,3,32	0/0:58,0:39:66.19:0,66,1060	0/1:52,1:20:32.98:33,0,438	0/0:10,0:3:3.01:0,3,43	0/0:48,0:25:60.12:0,60,950	0/0:43,0:24:51.16:0,51,821	0/0:63,0:37:60.11:0,60,945	0/0:46,0:26:54.05:0,54,881	0/0:50,0:31:63.19:0,63,988	0/1:83,5:48:99:184,0,1109	0/0:41,0:13:13.12:0,13,156	0/0:29,0:3:3.01:0,3,40	1/1:21,0:8:2.15:7,2,0	0/1:100,3:45:99:130,0,425	0/0:37,0:21:39.11:0,39,588	0/1:26,0:13:15.37:15,0,61	0/1:82,2:42:99:115,0,343	0/0:25,0:15:24.97:0,25,406	0/1:63,1:28:26.95:27,0,543	0/1:13,1:8:67.86:68,0,90	0/1:7,4:7:36.11:262,0,36
chr10	69141779	.	T	TTCC	688.97	PASS	AB=0.869;AC=3;AF=0.058;AN=52;BaseQRankSum=1.660;DP=1187;FS=0.841;HRun=0;HaplotypeScore=128.4038;InbreedingCoeff=-0.0017;MQ=28.67;MQ0=263;MQRankSum=-3.441;QD=3.72;ReadPosRankSum=-1.458;VQSLOD=2.1565;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:69,0:36:16.01:0,16,307	0/0:14,0:12:18.06:0,18,260	./.	./.	0/0:16,0:9:8.83:0,9,86	0/0:43,0:20:33.02:0,33,437	0/0:91,0:47:69.14:0,69,1009	0/0:57,0:5:8.95:0,9,76	0/1:58,0:39:32.69:33,0,460	0/0:49,0:26:41.99:0,42,523	0/0:9,0:5:1.77:0,2,4	0/0:49,0:28:48.07:0,48,628	0/0:41,0:24:44.43:0,44,633	0/0:51,0:31:44.94:0,45,594	0/0:45,0:27:45.06:0,45,698	0/0:49,0:32:42:0,42,559	0/0:81,0:43:69.15:0,69,926	0/0:41,0:19:4.05:0,4,121	0/0:25,0:4:6.02:0,6,71	0/0:18,0:9:12.19:0,12,156	0/0:94,0:44:23.03:0,23,238	0/0:39,0:25:45.11:0,45,609	0/1:27,5:16:22.71:274,0,23	0/1:62,32:50:99:480,0,105	0/0:26,0:17:33.05:0,33,428	0/0:66,0:32:42:0,42,526	0/0:16,0:10:18.01:0,18,223	0/0:11,0:6:12.04:0,12,173
chr10	69141842	.	CTCT	C	573.04	PASS	AB=0.995;AC=15;AF=0.268;AN=56;BaseQRankSum=7.741;DP=946;FS=2.544;HRun=0;HaplotypeScore=112.0576;InbreedingCoeff=0.0564;MQ=35.14;MQ0=143;MQRankSum=-7.114;QD=1.48;ReadPosRankSum=-3.511;VQSLOD=1.4240;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:47,1:37:99:200,0,178	0/0:9,0:8:24.05:0,24,420	0/0:7,0:3:8.95:0,9,111	0/0:8,1:5:9.01:0,9,98	0/1:13,0:9:27.16:27,0,43	0/0:35,0:25:41.99:0,42,691	0/0:63,0:32:42.99:0,43,1047	0/1:63,0:19:57.73:58,0,182	0/0:42,0:34:36.82:0,37,997	0/1:40,1:15:99:103,0,159	1/1:5,1:4:2.96:19,3,0	0/0:34,0:19:37.51:0,38,656	0/0:34,1:28:60.05:0,60,1047	0/0:39,0:25:42.01:0,42,808	0/0:53,0:39:74.53:0,75,1331	0/0:37,1:26:63.02:0,63,1024	0/0:55,0:39:60.30:0,60,1331	0/1:28,0:17:26.35:26,0,51	0/1:39,0:13:56.69:57,0,84	0/1:19,0:15:36.75:37,0,88	1/1:58,1:21:6.50:42,7,0	0/0:30,0:26:65.85:0,66,989	0/0:22,0:16:41.92:0,42,574	0/0:66,0:48:27.87:0,28,936	0/0:22,0:18:44.58:0,45,568	0/1:48,0:34:99:111,0,303	0/1:17,0:7:28.36:28,0,29	1/1:5,0:2:2.99:24,3,0
chr10	69141857	.	C	CTCT	1829.91	PASS	AB=0.988;AC=16;AF=0.286;AN=56;BaseQRankSum=6.033;DP=856;FS=10.335;HRun=0;HaplotypeScore=114.9534;InbreedingCoeff=0.5783;MQ=41.02;MQ0=105;MQRankSum=-5.883;QD=6.18;ReadPosRankSum=-3.358;VQSLOD=1.2277;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:36,1:32:13.79:512,0,14	0/0:8,0:7:21.07:0,21,342	0/0:26,0:11:17.18:0,17,262	0/0:19,0:10:14.83:0,15,193	1/1:6,12:14:1:247,1,0	0/0:29,0:21:44.13:0,44,618	0/0:52,0:28:49.77:0,50,884	0/1:46,0:17:5.39:132,0,5	0/0:42,0:36:64.80:0,65,863	0/0:38,0:18:23.11:0,23,207	0/0:5,0:4:5.91:0,6,38	0/0:32,0:22:57.03:0,57,771	0/0:30,0:24:59.95:0,60,907	0/0:37,0:25:62.96:0,63,814	0/0:48,0:38:88.66:0,89,1258	0/0:30,0:23:57.06:0,57,850	0/0:52,0:39:81.01:0,81,1163	0/1:26,0:17:15.82:80,0,16	1/1:32,0:12:23.74:180,24,0	1/1:21,0:17:8.66:214,9,0	1/1:44,1:20:20.57:174,21,0	0/0:24,0:21:56.97:0,57,772	0/0:19,0:14:42.03:0,42,610	0/0:49,0:39:28.30:0,28,823	0/0:17,0:14:33.09:0,33,495	0/1:45,0:33:99:255,0,137	1/1:19,0:10:16.99:169,17,0	1/1:6,0:3:5.98:47,6,0
chr10	69144143	.	CACCA	C	7921.81	PASS	AB=0.981;AC=15;AF=0.268;AN=56;BaseQRankSum=21.372;DP=1104;FS=4.349;HRun=0;HaplotypeScore=262.0533;InbreedingCoeff=0.5462;MQ=57.20;MQ0=5;MQRankSum=-8.568;QD=20.42;ReadPosRankSum=2.840;VQSLOD=4.2204;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:43,1:44:46.14:518,0,46	0/0:16,0:16:45.15:0,45,1142	0/0:39,0:22:59.73:0,60,1076	0/0:32,0:22:35.67:0,36,1021	1/1:22,1:23:14.03:462,14,0	0/0:32,0:32:90.22:0,90,2243	0/0:32,0:32:93.29:0,93,2264	0/1:41,0:39:67.77:845,0,68	0/0:43,0:43:99:0,122,3220	0/0:50,0:50:99:0,147,3350	0/0:30,0:30:67.57:0,68,1776	0/0:55,0:55:99:0,165,3954	0/0:36,0:36:99:0,108,2757	0/0:54,0:54:99:0,160,4038	0/0:58,0:58:99:0,172,4480	0/0:48,0:48:99:0,144,3767	0/0:21,0:21:54.99:0,55,1458	0/1:21,0:21:32.60:386,0,33	0/1:36,2:31:11.47:695,0,11	0/1:46,1:45:64.74:630,0,65	1/1:64,0:62:80.57:1357,81,0	0/0:56,0:56:99:0,165,3909	0/0:28,0:28:84.26:0,84,2105	0/0:53,0:53:99:0,140,3450	0/0:31,0:31:81.28:0,81,2110	1/1:49,0:48:75.47:1367,75,0	1/1:38,0:38:63.22:1053,63,0	1/1:23,0:23:18.13:608,18,0
chr10	69144144	.	ACCAC	A	13528.05	PASS	AB=0.550;AC=19;AF=0.339;AN=56;BaseQRankSum=18.479;DP=1093;FS=1.838;HRun=0;HaplotypeScore=241.9807;InbreedingCoeff=0.9201;MQ=57.26;MQ0=5;MQRankSum=-9.820;QD=35.79;ReadPosRankSum=1.134;VQSLOD=4.8386;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:8,29:44:40.89:815,0,41	0/0:16,0:16:45.11:0,45,1083	0/0:39,0:22:50.95:0,51,1014	0/0:35,0:23:56.82:0,57,978	1/1:1,21:22:36.12:696,36,0	0/0:30,0:31:87.26:0,87,2193	0/0:35,0:35:96.77:0,97,2301	1/1:6,32:36:90.22:1559,90,0	0/0:43,0:43:99:0,121,3093	0/0:46,0:50:99:0,139,3166	0/0:28,0:30:64.51:0,65,1707	0/0:53,0:53:99:0,153,3757	0/0:36,0:36:99:0,108,2677	0/0:53,0:53:99:0,157,3946	0/0:58,0:58:99:0,169,4366	0/0:48,0:48:99:0,141,3704	0/0:22,0:22:57.97:0,58,1497	1/1:12,9:21:29.85:725,30,0	1/1:16,18:29:54.97:1203,55,0	1/1:4,40:42:29.61:1049,30,0	1/1:14,50:62:99:2373,130,0	0/0:56,0:56:99:0,150,3769	0/0:29,0:29:81.26:0,81,2083	0/0:51,0:51:99:0,137,3422	0/0:29,0:30:81.26:0,81,2056	1/1:11,38:48:99:2416,132,0	1/1:3,35:38:86.80:1658,87,0	1/1:1,22:23:29.95:1035,30,0
chr10	69144251	.	A	AC	4632.11	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=19.884;DP=1004;FS=11.202;HRun=7;HaplotypeScore=201.8170;InbreedingCoeff=0.9157;MQ=57.89;MQ0=9;MQRankSum=-1.959;QD=10.80;ReadPosRankSum=0.496;VQSLOD=1.8632;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:45,0:46:40.50:188,40,0	0/0:9,0:9:21.03:0,21,202	0/0:41,0:23:51.03:0,51,477	0/0:45,0:32:70.75:0,71,627	1/1:33,0:33:44.48:166,44,0	0/0:22,0:22:57.09:0,57,550	0/0:36,0:36:78.11:0,78,752	1/1:42,0:42:88.25:565,88,0	0/0:55,0:55:99:0,132,1246	0/1:49,0:46:19.19:117,0,19	1/1:16,0:16:8.31:47,8,0	0/0:46,0:46:99:0,108,1011	0/0:37,0:37:93.13:0,93,897	0/0:38,0:38:96.12:0,96,920	0/0:56,0:55:99:0,132,1273	0/0:33,0:33:80.69:0,81,756	0/0:16,0:16:36.05:0,36,346	1/1:19,0:18:21.75:239,22,0	1/1:22,1:20:45.61:306,46,0	1/1:23,1:24:41.77:347,42,0	1/1:95,3:97:99:1323,189,0	0/0:47,0:47:99:0,123,1186	0/0:27,0:27:75.10:0,75,718	0/0:39,0:39:96.14:0,96,926	0/0:28,0:28:66.10:0,66,636	1/1:46,1:45:97.31:786,97,0	1/1:21,0:21:47.74:379,48,0	1/1:11,0:10:20.68:169,21,0
chr10	69144252	.	C	CA	11239.72	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=18.393;DP=1007;FS=2.447;HRun=1;HaplotypeScore=182.8806;InbreedingCoeff=0.9723;MQ=58.13;MQ0=6;MQRankSum=-1.378;QD=25.96;ReadPosRankSum=0.453;VQSLOD=4.6509;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:46:93.08:764,93,0	0/0:9,0:9:24.07:0,24,312	0/0:39,0:22:65.84:0,66,738	0/0:43,0:31:56.47:0,56,861	1/1:10,0:33:70.30:524,70,0	0/0:22,0:22:63.06:0,63,836	0/0:34,0:34:93.26:0,93,1206	1/1:1,41:43:99:1497,117,0	0/0:53,0:53:99:0,144,1910	1/1:25,0:44:70.15:782,70,0	1/1:7,0:17:2.37:174,2,0	0/0:47,0:47:99:0,126,1651	0/0:39,0:39:99:0,111,1422	0/0:39,0:39:99:0,111,1466	0/0:56,0:55:99:0,162,2097	0/0:33,0:33:81.27:0,81,1111	0/0:16,0:16:39.10:0,39,508	1/1:7,12:18:50.40:614,50,0	1/1:13,11:21:59.62:712,60,0	1/1:3,23:27:44.28:612,44,0	1/1:19,77:95:99:2750,203,0	0/0:48,0:48:99:0,126,1691	0/0:28,0:28:78.25:0,78,1053	0/0:40,0:40:99:0,111,1448	0/0:28,0:28:75.20:0,75,990	1/1:4,42:47:99:1720,132,0	1/1:7,13:21:60.13:779,60,0	1/1:2,9:10:20.98:312,21,0
chr10	69144257	.	CCA	C	3084.57	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=16.895;DP=1004;FS=7.903;HRun=0;HaplotypeScore=218.8056;InbreedingCoeff=0.9494;MQ=58.41;MQ0=6;MQRankSum=0.586;QD=7.16;ReadPosRankSum=-0.900;VQSLOD=2.3021;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:38,4:42:86.09:671,86,0	0/0:10,0:10:27:0,27,377	0/0:39,0:22:54.92:0,55,708	0/0:47,0:33:60.64:0,61,869	1/1:34,2:36:54.08:437,54,0	0/0:24,0:24:69.17:0,69,1066	0/0:30,0:30:78.17:0,78,1175	1/1:38,0:38:18.14:79,18,0	0/0:48,0:48:99:0,126,2015	1/1:41,6:44:92.94:819,93,0	1/1:16,3:19:35.92:268,36,0	0/0:47,1:48:84.74:0,85,1833	0/0:40,0:40:99:0,120,1837	0/0:40,0:40:99:0,114,1748	0/0:53,0:52:99:0,135,2161	0/0:31,1:32:48.72:0,49,1299	0/0:16,0:16:31.60:0,32,571	1/1:18,0:17:16.56:78,17,0	1/1:25,0:24:22.29:152,22,0	1/1:27,0:27:10.42:76,10,0	1/1:94,0:92:72.57:313,73,0	0/0:48,0:48:99:0,129,2062	0/0:33,0:33:86.90:0,87,1282	0/0:39,0:39:99:0,99,1513	0/0:26,0:26:60.19:0,60,957	1/1:55,0:53:43.01:301,43,0	1/1:21,0:21:15.75:110,16,0	0/1:9,0:8:2.52:3,0,5
chr10	69144258	.	CA	C	7320.39	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=19.582;DP=1000;FS=7.816;HRun=1;HaplotypeScore=185.5880;InbreedingCoeff=0.9989;MQ=58.31;MQ0=6;MQRankSum=-1.239;QD=17.14;ReadPosRankSum=-0.717;VQSLOD=4.1251;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,27:39:92.67:713,93,0	0/0:10,0:10:27.02:0,27,354	0/0:40,0:23:63.09:0,63,814	0/0:47,0:33:77.80:0,78,991	1/1:12,23:35:71.58:556,72,0	0/0:24,0:24:69.16:0,69,929	0/0:30,0:30:87.20:0,87,1179	1/1:40,1:40:99:769,101,0	0/0:48,0:48:99:0,138,1897	1/1:25,22:44:97.08:750,97,0	1/1:9,10:19:36.63:296,37,0	0/0:47,0:47:99:0,125,1710	0/0:40,0:40:99:0,120,1602	0/0:40,0:40:99:0,111,1551	0/0:54,0:53:99:0,159,2124	0/0:32,0:32:86.16:0,86,1198	0/0:16,0:16:45:0,45,534	1/1:14,0:16:30.27:264,30,0	1/1:17,6:22:64.71:553,65,0	1/1:29,0:29:58.38:378,58,0	1/1:80,2:91:99:1483,216,0	0/0:48,0:48:99:0,141,1870	0/0:32,0:32:95.85:0,96,1190	0/0:39,0:39:99:0,108,1474	0/0:26,0:26:75.16:0,75,960	1/1:50,3:51:99:1036,145,0	1/1:19,3:22:58.77:402,59,0	1/1:9,0:8:19.31:122,19,0
chr10	69144349	.	TACACATAC	T	1865.57	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.912;DP=1131;FS=0.725;HRun=0;HaplotypeScore=331.4497;InbreedingCoeff=0.8677;MQ=58.59;MQ0=5;MQRankSum=-4.658;QD=44.42;ReadPosRankSum=-0.603;VQSLOD=2.4555;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:90.31:0,90,3024	0/0:13,0:13:36.12:0,36,1482	0/0:53,0:33:72.78:0,73,2614	0/0:48,0:37:88.23:0,88,2769	0/0:29,0:29:66.23:0,66,2272	0/0:27,0:27:72.25:0,72,2850	0/0:40,0:40:99:0,105,3847	0/0:43,0:43:99:0,114,3398	0/0:42,0:42:90.49:0,90,4183	1/1:7,35:40:75.26:1960,75,0	0/0:1,24:25:0:0,0,1	0/0:50,0:50:99:0,141,5676	0/0:49,0:49:99:0,132,5036	0/0:46,0:46:99:0,111,4655	0/0:55,0:55:99:0,154,6185	0/0:40,0:40:99:0,114,4810	0/0:26,0:27:63.09:0,63,2470	0/0:27,0:26:75.26:0,75,2573	0/0:31,0:27:72.25:0,72,2307	0/0:44,0:43:99:0,126,4321	0/0:83,0:83:99:0,232,7971	0/0:44,0:44:99:0,123,5044	0/0:46,0:46:99:0,129,5147	0/0:41,0:40:99:0,105,4344	0/0:24,0:24:54.19:0,54,2222	0/0:53,0:53:99:0,147,4946	0/0:33,0:33:87.26:0,87,2630	0/0:21,0:20:57.20:0,57,2043
chr10	69144507	.	TGCATACAC	T	295.17	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=9.810;DP=886;FS=6.631;HRun=0;HaplotypeScore=284.4585;InbreedingCoeff=0.3060;MQ=53.64;MQ0=4;MQRankSum=-8.858;QD=3.32;ReadPosRankSum=3.095;VQSLOD=1.5380;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,5:5:9.03:268,9,0	0/0:10,0:10:30.09:0,30,1200	0/0:52,0:26:72.14:0,72,2187	0/0:47,0:29:81:0,81,2623	0/0:0,5:5:0:0,0,0	0/0:34,0:34:93.32:0,93,4099	0/0:28,0:27:77.85:0,78,3321	0/0:35,0:32:93.29:0,93,2732	0/0:38,0:38:99:0,114,5011	0/0:43,0:43:99:0,126,4661	0/0:20,0:20:51.13:0,51,1940	0/0:47,0:47:99:0,141,6217	0/0:46,0:46:99:0,135,5612	0/0:31,0:31:90.26:0,90,3630	0/0:39,0:39:99:0,111,4719	0/0:36,0:36:99:0,105,4337	0/0:26,0:26:72.10:0,72,2624	0/1:20,0:20:21.58:22,0,619	0/0:21,0:18:7.46:0,7,1043	0/0:35,0:34:12.79:0,13,933	0/0:50,0:48:51.17:0,51,1477	0/0:34,0:34:99:0,102,4278	0/0:42,0:42:99:0,123,5064	0/0:33,0:32:84.21:0,84,3443	0/0:32,0:32:93.18:0,93,3914	0/1:36,0:36:78.59:79,0,1199	0/1:28,0:28:43.66:44,0,631	0/0:12,0:12:5.42:0,5,584
chr10	69144511	.	TACACACACATACATACCAC	T	7168.91	PASS	AB=0.559;AC=13;AF=0.241;AN=54;BaseQRankSum=12.264;DP=878;FS=8.589;HRun=0;HaplotypeScore=420.2130;InbreedingCoeff=0.8527;MQ=52.43;MQ0=8;MQRankSum=-9.335;QD=40.73;ReadPosRankSum=-0.428;VQSLOD=2.2333;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:6:6.82:0,7,23	0/0:9,0:9:21.07:0,21,1097	0/0:52,0:22:34.90:0,35,1162	0/0:52,0:32:63.19:0,63,2086	0/0:8,0:8:0:0,0,0	0/0:35,0:35:87.07:0,87,6234	0/0:30,0:29:69.24:0,69,4137	1/1:32,0:28:35.38:711,35,0	0/0:38,0:38:99:0,114,7004	0/0:42,0:43:70.82:0,71,5279	0/0:19,0:19:33.06:0,33,1684	0/0:47,0:47:99:0,123,7744	0/0:44,0:44:99:0,105,6851	0/0:32,0:32:84.76:0,85,5001	0/0:39,0:39:90.31:0,90,6896	0/0:36,0:36:90.27:0,90,5223	0/0:24,0:24:54.18:0,54,3537	1/1:13,6:19:27.09:1060,27,0	1/1:19,3:19:30.08:776,30,0	1/1:14,19:32:26.69:746,27,0	./.	0/0:33,0:33:81.26:0,81,5354	0/0:41,0:41:99:0,99,7001	0/0:34,0:33:69.24:0,69,4963	0/0:31,0:31:75.26:0,75,5247	0/1:7,26:33:70.06:2232,0,70	1/1:7,19:26:24.08:1130,24,0	1/1:8,2:10:21.02:514,21,0
chr10	69144523	.	CAT	C	2152.52	PASS	AC=16;AF=0.296;AN=54;BaseQRankSum=13.125;DP=844;FS=4.678;HRun=0;HaplotypeScore=180.5235;InbreedingCoeff=0.9479;MQ=49.95;MQ0=15;MQRankSum=-10.071;QD=12.30;ReadPosRankSum=-1.745;VQSLOD=2.9036;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,0:12:5.98:17,6,0	0/0:9,0:9:27.09:0,27,519	0/0:62,0:21:42.96:0,43,890	0/0:60,0:28:75.10:0,75,1194	0/0:8,0:8:0:0,0,0	0/0:37,0:37:99:0,102,1931	0/0:32,0:31:84.29:0,84,1620	1/1:13,13:23:42.30:688,42,0	0/0:42,0:42:99:0,126,2331	0/0:37,0:37:28.15:0,28,758	0/0:18,0:18:33.02:0,33,321	0/0:46,0:46:99:0,138,2560	0/0:40,0:40:99:0,114,2174	0/0:30,0:30:87.29:0,87,1621	0/0:35,0:35:99:0,102,1957	0/0:32,0:32:96.28:0,96,1733	0/0:23,0:23:63.21:0,63,1170	1/1:11,4:15:27.36:246,27,0	1/1:18,6:18:28.03:328,28,0	1/1:26,7:32:26.69:339,27,0	./.	0/0:31,0:31:84.27:0,84,1588	0/0:36,0:36:99:0,105,1969	0/0:33,0:32:81.28:0,81,1553	0/0:29,0:29:84.29:0,84,1595	1/1:31,0:31:18.83:412,19,0	1/1:22,0:22:15.23:112,15,0	1/1:9,2:11:18.81:208,19,0
chr10	69144525	.	TACC	T	727.46	PASS	AB=0.912;AC=10;AF=0.192;AN=52;BaseQRankSum=11.228;DP=830;FS=16.983;HRun=0;HaplotypeScore=195.2475;InbreedingCoeff=0.2411;MQ=49.78;MQ0=15;MQRankSum=-10.362;QD=4.38;ReadPosRankSum=1.351;VQSLOD=1.7201;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:4,9:12:8.69:150,9,0	0/0:9,0:9:27.08:0,27,520	0/0:63,0:20:53.39:0,53,1001	0/0:61,0:28:69.17:0,69,1181	./.	0/0:38,0:38:99:0,99,2172	0/0:32,0:31:86.97:0,87,1863	0/1:19,0:21:78.74:79,0,118	0/0:42,0:42:99:0,126,2645	0/0:37,0:37:96.21:0,96,1915	0/0:18,0:18:30.10:0,30,653	0/0:47,0:47:99:0,132,2780	0/0:39,0:39:99:0,111,2371	0/0:30,0:30:84.29:0,84,1790	0/0:34,0:34:99:0,99,2224	0/0:30,0:30:84.27:0,84,1818	0/0:23,0:23:65.82:0,66,1389	0/1:15,0:15:26.60:68,0,27	0/1:20,0:15:27.41:64,0,27	0/1:30,0:30:19.46:24,0,19	./.	0/0:28,0:28:81.26:0,81,1681	0/0:36,0:36:99:0,102,2238	0/0:32,0:31:78.27:0,78,1774	0/0:29,0:29:84.20:0,84,1784	0/1:28,0:30:84.07:233,0,84	1/1:19,0:21:26.63:191,27,0	0/1:8,0:11:17.45:69,0,17
chr10	69144584	.	TATATACACACATACACACATCACAC	T	4733.55	PASS	AB=1.000;AC=15;AF=0.278;AN=54;BaseQRankSum=11.885;DP=691;FS=15.960;HRun=0;HaplotypeScore=394.9479;InbreedingCoeff=0.6074;MQ=51.24;MQ0=8;MQRankSum=-11.100;QD=28.34;ReadPosRankSum=-0.411;VQSLOD=1.5334;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:9,23:32:6.93:244,7,0	0/0:5,0:5:12.04:0,12,778	0/0:42,0:23:43.07:0,43,1604	0/0:47,0:26:60.86:0,61,1562	1/1:7,14:22:0.89:2,1,0	0/0:32,0:32:80.92:0,81,4582	0/0:28,0:28:46.62:0,47,2289	1/1:17,0:17:33.10:648,33,0	0/0:36,0:36:93.26:0,93,5918	0/1:31,0:30:52.06:378,0,52	./.	0/0:36,0:36:99:0,105,6197	0/0:25,0:25:72.25:0,72,3747	0/0:20,0:20:51.15:0,51,3093	0/0:31,0:31:75.24:0,75,4903	0/0:32,0:32:93.31:0,93,6176	0/0:31,0:31:84.27:0,84,4874	0/1:19,0:18:37.09:825,0,37	0/1:8,0:8:69.81:261,0,70	0/0:13,1:26:1.15:0,1,14	0/0:21,0:20:0:0,0,0	0/0:27,0:27:73.93:0,74,4183	0/0:19,0:19:57.17:0,57,2968	0/0:33,0:33:93.32:0,93,6748	0/0:16,0:16:44.23:0,44,1977	1/1:16,0:16:39.13:981,39,0	1/1:13,0:14:27.09:632,27,0	1/1:6,0:8:24.08:762,24,0
chr10	69144586	.	TATACACACATACACACATCACACACAC	T	3723.71	PASS	AB=1.000;AC=15;AF=0.278;AN=54;BaseQRankSum=12.900;DP=671;FS=12.611;HRun=0;HaplotypeScore=405.0396;InbreedingCoeff=0.6034;MQ=51.37;MQ0=10;MQRankSum=-9.626;QD=23.13;ReadPosRankSum=-1.239;VQSLOD=0.1982;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:31,0:32:6.64:115,7,0	0/0:5,0:5:12.04:0,12,780	0/0:42,0:21:45.99:0,46,1361	0/0:46,0:25:40.67:0,41,1404	1/1:20,0:20:0.89:2,1,0	0/0:31,0:31:77.94:0,78,4616	0/0:30,0:30:49.62:0,50,2505	0/1:15,0:14:35.66:383,0,36	0/0:35,0:35:92.84:0,93,6106	1/1:5,28:32:44.84:846,45,0	./.	0/0:35,0:35:99:0,102,6310	0/0:24,0:24:72.17:0,72,3710	0/0:18,0:18:48.16:0,48,3312	0/0:31,0:31:74.91:0,75,5191	0/0:30,0:30:90.27:0,90,6476	0/0:31,0:31:84.18:0,84,5233	0/1:19,0:18:99:664,0,105	0/1:6,0:6:75.35:124,0,75	0/0:22,0:22:1.12:0,1,14	0/0:17,0:17:0:0,0,0	0/0:28,0:28:73.87:0,74,4540	0/0:19,0:19:57.15:0,57,3222	0/0:32,0:32:93.25:0,93,6937	0/0:16,0:16:41.16:0,41,1947	1/1:14,0:14:38.54:713,39,0	1/1:14,0:14:15.36:355,15,0	1/1:8,0:8:23.29:522,23,0
chr10	69144604	.	TCA	T	424.96	PASS	AB=0.890;AC=19;AF=0.380;AN=50;BaseQRankSum=5.107;DP=615;FS=5.364;HRun=0;HaplotypeScore=138.2745;InbreedingCoeff=-0.1898;MQ=49.04;MQ0=20;MQRankSum=-0.770;QD=1.15;ReadPosRankSum=0.312;VQSLOD=2.4178;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:28:0.90:2,1,0	0/1:5,1:5:23.92:24,0,81	./.	./.	0/1:17,0:17:0:0,0,0	0/1:22,4:26:35.73:36,0,288	1/1:12,7:22:14.54:126,15,0	0/1:14,0:21:17.70:18,0,108	0/1:33,0:32:18.92:19,0,439	0/0:30,0:29:10.90:0,11,61	./.	0/1:25,0:26:61.95:62,0,474	0/0:18,0:19:9.65:0,10,311	0/0:17,0:17:30.10:0,30,432	0/1:24,3:27:29.86:30,0,380	0/1:29,1:30:13.86:14,0,734	0/0:30,0:29:24.46:0,24,559	0/1:14,0:16:3.45:3,0,74	0/1:8,0:13:6:6,0,15	0/0:16,0:17:2.74:0,3,12	0/0:16,0:12:0:0,0,0	0/1:28,5:33:24.96:25,0,426	0/0:16,0:15:4.20:0,4,371	0/1:37,3:38:99:104,0,557	0/1:10,3:12:77.78:78,0,140	0/0:10,0:14:1.77:0,2,51	0/0:11,0:11:2.99:0,3,23	1/1:9,0:10:3.92:14,4,0
chr10	69144946	.	AG	A	6801.63	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=11.929;DP=559;FS=5.020;HRun=5;HaplotypeScore=69.9008;InbreedingCoeff=0.9940;MQ=89.54;MQ0=0;MQRankSum=-2.658;QD=28.82;ReadPosRankSum=-1.009;VQSLOD=4.8311;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,24:26:60.17:680,60,0	0/0:4,0:4:12.04:0,12,164	0/0:23,0:23:69.17:0,69,857	0/0:22,0:22:23.64:0,24,314	1/1:1,25:26:69.10:752,69,0	0/0:21,0:21:63.21:0,63,861	0/0:23,0:23:60.15:0,60,770	1/1:3,23:26:69.16:756,69,0	0/0:9,0:9:24.06:0,24,311	0/0:24,0:24:57.18:0,57,762	0/0:11,0:11:27.07:0,27,337	0/0:21,0:21:60.19:0,60,804	0/0:16,0:16:45.14:0,45,597	0/0:11,0:11:33.01:0,33,395	0/0:25,0:25:75.25:0,75,1024	0/0:20,0:20:54.18:0,54,739	0/0:25,0:25:69.20:0,69,923	1/1:1,7:8:21.06:238,21,0	1/1:2,18:20:54.13:594,54,0	1/1:2,33:35:96.19:1059,96,0	1/1:1,19:20:51.14:578,51,0	0/0:19,0:19:57.19:0,57,777	0/0:17,0:17:48.15:0,48,640	0/0:13,0:12:36.12:0,36,492	0/0:19,0:19:48.14:0,48,628	1/1:2,20:22:60.14:661,60,0	1/1:5,33:38:87.25:986,87,0	1/1:0,15:15:45.10:497,45,0
chr10	69146704	.	A	AT	5522.99	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=3.643;DP=533;FS=26.385;HRun=7;HaplotypeScore=67.3576;InbreedingCoeff=0.9933;MQ=67.58;MQ0=0;MQRankSum=-3.450;QD=27.07;ReadPosRankSum=0.108;VQSLOD=3.0441;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,49:40:99:1341,111,0	0/0:10,0:10:30.05:0,30,290	0/0:10,0:9:20.21:0,20,168	0/0:8,0:7:13.88:0,14,104	1/1:6,23:29:62.84:717,63,0	0/0:27,0:27:69.10:0,69,666	0/0:28,0:28:75.10:0,75,719	1/1:3,20:22:57.13:672,57,0	0/0:18,0:18:45.07:0,45,434	0/0:26,0:26:75.11:0,75,719	0/0:12,0:12:36.06:0,36,348	0/0:16,0:16:39.06:0,39,376	0/0:17,0:17:45.07:0,45,434	0/0:15,0:15:38.64:0,39,352	0/0:15,0:15:42.06:0,42,405	0/0:19,0:19:54.08:0,54,517	0/0:24,1:25:66.09:0,66,631	1/1:0,13:12:30.09:362,30,0	1/1:1,17:18:51.16:616,51,0	1/1:3,11:13:33.10:399,33,0	1/1:2,9:10:18.06:217,18,0	0/0:13,0:13:36.06:0,36,346	0/0:18,0:18:45.07:0,45,434	0/0:29,0:29:78.11:0,78,748	0/0:23,0:23:66.08:0,66,630	1/1:3,18:20:25.20:587,25,0	1/1:6,6:11:18.05:213,18,0	1/1:0,12:11:33.10:399,33,0
chr10	69147451	.	T	TAAGG	18284.74	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=1.616;DP=536;FS=12.486;HRun=0;HaplotypeScore=86.6784;InbreedingCoeff=0.9954;MQ=80.01;MQ0=0;MQRankSum=-10.216;QD=74.63;ReadPosRankSum=1.091;VQSLOD=6.4902;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,34:39:99:2853,102,0	0/0:4,0:4:12.04:0,12,238	0/0:18,0:18:48.16:0,48,978	0/0:17,0:17:44.79:0,45,888	1/1:2,11:13:33.11:892,33,0	0/0:16,0:16:48.16:0,48,991	0/0:31,0:31:93.28:0,93,1872	1/1:5,19:25:72.25:1998,72,0	0/0:14,0:14:39.13:0,39,803	1/1:4,11:16:48.15:1278,48,0	1/1:1,12:13:27.09:782,27,0	0/0:18,0:18:54.19:0,54,1129	0/0:21,0:21:63.22:0,63,1301	0/0:19,0:19:57.20:0,57,1182	0/0:15,0:15:45.15:0,45,944	0/0:15,0:15:45.14:0,45,904	0/0:40,0:40:99:0,120,2368	1/1:2,23:26:69.24:1951,69,0	1/1:6,11:19:54.16:1428,54,0	1/1:1,9:11:33.11:844,33,0	1/1:5,25:31:81.28:2253,81,0	0/0:16,0:16:45.15:0,45,931	0/0:13,0:13:39.12:0,39,766	0/0:21,0:21:63.17:0,63,1249	0/0:13,0:13:36.11:0,36,705	1/1:3,8:13:39.12:965,39,0	1/1:1,13:14:42.14:1216,42,0	1/1:0,24:24:63.22:1825,63,0
chr10	69147596	.	AT	A	2819.29	PASS	AB=0.955;AC=22;AF=0.393;AN=56;BaseQRankSum=14.584;DP=617;FS=0.000;HRun=12;HaplotypeScore=83.7785;InbreedingCoeff=0.8749;MQ=68.55;MQ0=0;MQRankSum=-0.272;QD=12.87;ReadPosRankSum=1.070;VQSLOD=3.7494;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:53,2:55:76.09:0,76,547	0/0:9,0:9:23.96:0,24,224	0/1:13,0:11:2.89:3,0,131	0/1:9,1:10:6.66:7,0,85	0/0:28,0:28:70.04:0,70,330	0/0:24,1:25:42.48:0,42,595	0/0:28,0:28:60.12:0,60,609	1/1:6,12:18:26.11:252,26,0	0/0:22,0:22:60.10:0,60,597	1/1:0,0:25:50.93:147,51,0	1/1:0,1:17:31.50:106,31,0	0/0:20,2:22:13.62:0,14,476	0/0:13,0:13:33.03:0,33,320	0/0:25,0:26:59.94:0,60,587	0/0:17,0:17:47.30:0,47,459	0/0:10,1:11:9.81:0,10,275	0/0:38,2:40:89.74:0,90,1058	1/1:3,24:27:76.81:575,77,0	1/1:5,14:19:45.20:336,45,0	1/1:3,13:16:35.85:278,36,0	1/1:4,15:19:29.13:329,29,0	0/0:17,0:17:48:0,48,468	0/0:27,0:27:69.09:0,69,680	0/0:26,0:27:74.97:0,75,739	0/0:29,1:31:76.93:0,77,812	1/1:5,25:30:71.07:541,71,0	1/1:2,16:18:44.82:348,45,0	1/1:0,7:7:14.94:116,15,0
chr10	69148698	.	CTCTCTGTGTG	C	579.82	PASS	AB=1.000;AC=6;AF=0.107;AN=56;BaseQRankSum=3.359;DP=563;FS=3.201;HRun=0;HaplotypeScore=161.5369;InbreedingCoeff=0.2914;MQ=48.05;MQ0=36;MQRankSum=1.299;QD=7.25;ReadPosRankSum=-1.377;VQSLOD=2.5966;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:20:0.94:2,1,0	0/0:11,0:11:16.89:0,17,315	0/0:11,0:4:12.04:0,12,267	0/0:14,0:5:6.02:0,6,174	1/1:14,0:12:2.68:11,3,0	0/0:24,0:20:26.60:0,27,1130	0/0:36,0:34:44.49:0,44,738	0/0:22,0:20:42.36:0,42,659	0/0:25,0:24:54.65:0,55,1136	0/1:23,0:22:85.99:637,0,86	0/0:6,11:17:4.76:0,5,30	0/0:28,0:28:77.65:0,78,2160	0/0:30,0:29:61.39:0,61,1426	0/0:22,0:20:51.13:0,51,1211	0/0:23,0:22:33.10:0,33,869	0/0:13,0:12:27.08:0,27,611	0/0:27,0:26:51.53:0,52,1361	0/1:21,0:19:28.09:28,0,1005	0/0:12,0:11:15.52:0,16,289	0/0:9,0:9:2.29:0,2,6	0/0:12,0:10:5.54:0,6,26	0/0:19,0:18:45.13:0,45,1121	0/0:23,0:23:40.80:0,41,876	0/0:39,0:39:55.54:0,56,2053	0/0:17,0:17:22.70:0,23,510	0/0:20,0:16:45.97:0,46,949	0/0:19,0:17:40.36:0,40,751	0/0:9,0:5:5.98:0,6,114
chr10	69148702	.	CTGTGTG	C	611.89	PASS	AB=0.882;AC=5;AF=0.089;AN=56;BaseQRankSum=1.568;DP=588;FS=1.098;HRun=0;HaplotypeScore=141.6928;InbreedingCoeff=0.6547;MQ=48.54;MQ0=35;MQRankSum=1.740;QD=9.41;ReadPosRankSum=-0.083;VQSLOD=2.5641;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:25:0.47:1,0,0	0/0:10,0:10:9.03:0,9,203	0/0:20,0:7:20.86:0,21,412	0/0:22,0:8:11.54:0,12,325	0/0:17,0:15:5.89:0,6,86	0/0:25,0:21:43.39:0,43,1041	0/0:34,0:32:29.42:0,29,531	0/0:25,0:22:51.04:0,51,954	0/0:25,0:24:51.10:0,51,1084	1/1:7,15:22:38.28:705,38,0	0/1:13,0:15:0:0,0,0	0/0:28,0:28:68.19:0,68,1796	0/0:26,0:25:56.83:0,57,1090	0/0:21,0:20:42.10:0,42,972	0/0:23,0:22:30.09:0,30,655	0/0:12,0:11:18.06:0,18,416	0/0:28,0:27:48.11:0,48,1100	0/0:20,0:19:41.89:0,42,901	0/0:14,0:13:15.05:0,15,294	0/0:11,0:11:0.12:0,0,0	0/0:12,0:11:12.10:0,12,214	0/0:21,0:20:45.12:0,45,997	0/0:23,0:23:53.78:0,54,960	0/0:39,0:39:65.74:0,66,1217	0/0:16,0:16:30.08:0,30,645	0/0:23,0:19:42.09:0,42,841	0/0:20,0:18:33.09:0,33,603	0/0:8,0:5:3.01:0,3,81
chr10	69149793	.	GA	G	8432.60	PASS	AB=0.522;AC=19;AF=0.339;AN=56;BaseQRankSum=19.781;DP=748;FS=4.147;HRun=5;HaplotypeScore=115.7466;InbreedingCoeff=0.9217;MQ=86.47;MQ0=0;MQRankSum=-4.808;QD=31.12;ReadPosRankSum=0.637;VQSLOD=4.1231;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,48:52:99:1565,138,0	0/0:17,0:17:48.16:0,48,657	0/0:24,1:24:66.19:0,66,856	0/0:37,0:37:92.07:0,92,1323	1/1:1,21:22:57.16:647,57,0	0/0:27,0:27:75.25:0,75,1026	0/0:37,0:37:99:0,99,1335	1/1:0,24:24:72.21:817,72,0	0/0:32,0:32:90.25:0,90,1180	0/0:23,0:23:66.22:0,66,903	0/0:16,0:16:42.14:0,42,575	0/0:29,0:29:84.27:0,84,1135	0/0:25,0:25:75.24:0,75,1008	0/0:25,0:25:66.21:0,66,887	0/0:23,0:23:69.22:0,69,928	0/0:33,0:33:99:0,99,1339	0/0:38,0:38:99:0,102,1378	1/1:1,21:22:63.18:715,63,0	1/1:1,16:17:48.14:545,48,0	1/1:0,30:30:84.24:953,84,0	1/1:1,32:33:90.26:1021,90,0	0/0:21,0:21:60.17:0,60,788	0/0:21,0:21:63.20:0,63,845	0/0:29,0:29:84.27:0,84,1132	0/0:19,0:19:57.19:0,57,780	0/1:3,33:36:14.84:1014,0,15	1/1:1,28:29:84.24:953,84,0	1/1:0,6:6:18.05:204,18,0
chr10	69150633	.	G	GGTGGAGGGAGAGGTCT	7464.23	PASS	AB=1.000;AC=21;AF=0.389;AN=54;BaseQRankSum=0.387;DP=338;FS=31.141;HRun=0;HaplotypeScore=139.5245;InbreedingCoeff=0.8058;MQ=62.20;MQ0=12;MQRankSum=-9.600;QD=100.87;ReadPosRankSum=0.141;VQSLOD=2.8975;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,1:9:18.06:883,18,0	0/0:8,0:8:18.06:0,18,733	0/0:36,0:14:39.08:0,39,1206	0/0:26,0:12:29.97:0,30,736	1/1:6,3:11:9.03:550,9,0	0/0:9,0:9:21.96:0,22,1029	0/0:18,0:18:38.96:0,39,1617	1/1:6,0:4:9.03:607,9,0	0/0:8,0:8:24.08:0,24,1002	1/1:4,2:6:0.58:779,1,0	1/1:4,3:9:13.86:705,14,0	0/0:7,0:7:18.06:0,18,874	0/0:5,0:5:12:0,12,430	0/0:11,0:11:18.03:0,18,743	0/0:11,0:11:24.08:0,24,995	0/0:9,0:9:15.05:0,15,602	0/0:35,0:35:63.22:0,63,2751	1/1:3,2:6:15.05:858,15,0	0/1:5,0:2:11.48:173,0,11	1/1:2,2:4:6.02:382,6,0	./.	0/0:14,0:14:33.11:0,33,1245	0/0:17,0:15:39.12:0,39,1578	0/0:23,0:23:42.14:0,42,2035	0/0:26,0:26:66.18:0,66,2408	1/1:5,1:6:18.06:1200,18,0	1/1:0,0:1:3.01:212,3,0	1/1:6,0:6:15.05:1115,15,0
chr10	69151784	.	GTCTGTCT	G	2827.40	PASS	AB=1.000;AC=16;AF=0.296;AN=54;BaseQRankSum=1.385;DP=685;FS=0.418;HRun=0;HaplotypeScore=178.9316;InbreedingCoeff=0.4019;MQ=54.30;MQ0=21;MQRankSum=-7.560;QD=11.45;ReadPosRankSum=-4.777;VQSLOD=1.4260;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:12,0:11:30.09:0,30,752	0/0:62,0:27:57.90:0,58,1046	0/0:70,0:20:54.08:0,54,885	1/1:19,0:15:6:84,6,0	0/0:20,0:20:51.17:0,51,1360	0/0:32,0:32:69.66:0,70,1571	1/1:32,0:32:39.18:886,39,0	0/0:14,0:14:39.13:0,39,933	1/1:36,0:35:10.04:786,10,0	1/1:14,0:14:2.77:45,3,0	0/0:20,0:20:48.16:0,48,1261	0/0:19,0:19:51.06:0,51,1210	0/0:12,0:12:26.96:0,27,511	0/0:17,0:17:42.14:0,42,1013	0/0:24,0:24:66.22:0,66,1474	0/0:29,0:29:81.22:0,81,2132	1/1:3,18:21:3.01:61,3,0	0/1:23,0:22:99:453,0,104	0/1:15,0:15:53.98:168,0,54	0/1:25,0:24:2.08:17,0,2	0/0:14,0:14:39.13:0,39,887	0/0:23,0:23:57.04:0,57,1313	0/0:26,0:26:30.37:0,30,1448	0/0:16,0:16:42.13:0,42,982	0/1:28,0:28:99:227,0,251	0/1:23,0:23:99:111,0,126	0/1:11,0:11:99:160,0,123
chr10	69151788	.	GTCT	G	5217.61	PASS	AC=22;AF=0.407;AN=54;BaseQRankSum=5.931;DP=694;FS=1.612;HRun=0;HaplotypeScore=127.3741;InbreedingCoeff=0.9194;MQ=52.48;MQ0=28;MQRankSum=-6.192;QD=21.65;ReadPosRankSum=0.082;VQSLOD=4.3970;culprit=FS;set=input10	GT:AD:DP:GQ:PL	./.	0/0:12,0:11:30.09:0,30,525	0/0:66,0:25:60.34:0,60,887	0/0:76,0:21:57.15:0,57,820	1/1:20,0:16:6:59,6,0	0/0:21,0:21:54.05:0,54,1027	0/0:30,0:30:72.40:0,72,1237	1/1:32,0:32:62.23:1123,62,0	0/0:14,0:14:42.14:0,42,761	1/1:10,25:34:68.56:1288,69,0	1/1:6,7:13:2.49:45,2,0	0/0:18,0:18:48.16:0,48,897	0/0:19,0:19:54.06:0,54,917	0/0:11,0:11:22.15:0,22,439	0/0:16,0:16:45.15:0,45,800	0/0:25,0:24:69.23:0,69,1193	0/0:28,0:28:81.22:0,81,1539	1/1:21,0:21:6.02:92,6,0	1/1:23,0:21:47.34:686,47,0	1/1:14,0:14:6.71:258,7,0	1/1:22,0:21:32.88:258,33,0	0/0:16,0:16:45.15:0,45,767	0/0:23,0:23:57.02:0,57,1004	0/0:24,1:25:30.37:0,30,1038	0/0:16,0:16:42.13:0,42,736	1/1:26,0:26:37.28:646,37,0	1/1:24,0:24:47.13:459,47,0	1/1:11,0:11:10.14:303,10,0
chr10	69151790	.	CTTCTGTCTGTCTG	C	874.82	PASS	AB=0.972;AC=10;AF=0.179;AN=56;BaseQRankSum=0.324;DP=696;FS=2.624;HRun=0;HaplotypeScore=240.0848;InbreedingCoeff=0.1715;MQ=51.54;MQ0=30;MQRankSum=-6.211;QD=5.18;ReadPosRankSum=-6.108;VQSLOD=1.0216;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:9,23:25:0:0,0,0	0/0:13,0:11:30.09:0,30,1178	0/0:66,0:24:62.79:0,63,1404	0/0:79,0:20:57.11:0,57,1201	1/1:6,0:16:6.02:182,6,0	0/0:21,0:21:54.18:0,54,1922	0/0:32,0:32:78.22:0,78,2255	0/1:32,0:32:99:288,0,256	0/0:14,0:14:42.14:0,42,1527	0/1:28,0:34:99:120,0,523	1/1:10,0:12:1.68:5,2,0	0/0:18,0:18:48.16:0,48,1889	0/0:21,0:21:57.09:0,57,1776	0/0:11,0:11:30.10:0,30,815	0/0:16,0:16:45.15:0,45,1441	0/0:24,0:23:69.19:0,69,2180	0/0:28,0:28:67.84:0,68,3136	0/1:21,0:21:29.09:81,0,29	0/1:24,0:22:99:249,0,659	0/1:14,0:14:46.23:46,0,302	0/0:22,0:21:30.10:0,30,551	0/0:16,0:16:45.14:0,45,1383	0/0:23,0:23:57.06:0,57,1924	0/0:25,0:25:59.98:0,60,1949	0/0:16,0:16:42.13:0,42,1406	0/0:26,0:26:19.64:0,20,1519	0/0:23,0:23:39.91:0,40,882	0/1:11,0:11:40.88:41,0,579
chr10	69151791	.	T	TG	6900.72	PASS	AB=0.821;AC=23;AF=0.411;AN=56;BaseQRankSum=4.393;DP=698;FS=0.000;HRun=0;HaplotypeScore=108.2457;InbreedingCoeff=0.9169;MQ=51.25;MQ0=30;MQRankSum=-4.330;QD=24.91;ReadPosRankSum=0.418;VQSLOD=5.5141;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:24:0:0,0,0	0/0:13,0:11:30.09:0,30,402	0/0:65,0:24:62.32:0,62,753	0/0:79,0:20:57.16:0,57,737	1/1:14,3:16:5.79:36,6,0	0/0:22,0:22:54.18:0,54,746	0/0:33,0:33:75.36:0,75,975	1/1:1,30:31:77.97:1284,78,0	0/0:14,0:14:42.14:0,42,587	1/1:36,1:36:85.54:1018,86,0	1/1:9,3:12:2.62:45,3,0	0/0:17,0:17:48.16:0,48,671	0/0:20,0:20:57.11:0,57,717	0/0:10,0:10:29.99:0,30,393	0/0:15,0:15:45.15:0,45,629	0/0:25,0:24:69.23:0,69,960	0/0:28,0:28:81.22:0,81,1104	1/1:18,1:19:6.02:89,6,0	1/1:3,22:23:68.90:961,69,0	1/1:2,14:16:26.85:411,27,0	1/1:2,19:21:33.07:498,33,0	0/0:16,0:16:45.15:0,45,629	0/0:23,0:23:56.50:0,57,668	0/0:24,0:25:27.83:0,28,670	0/0:15,0:15:42.12:0,42,557	1/1:2,26:28:78.27:1229,78,0	1/1:1,23:24:51.17:811,51,0	1/1:0,11:11:33.11:517,33,0
chr10	69151803	.	GTCTC	G	275.78	PASS	AB=0.925;AC=13;AF=0.260;AN=50;BaseQRankSum=3.923;DP=724;FS=0.851;HRun=0;HaplotypeScore=158.7799;InbreedingCoeff=-0.1172;MQ=49.83;MQ0=36;MQRankSum=-2.519;QD=0.95;ReadPosRankSum=0.304;VQSLOD=2.7685;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:32:11.96:0,12,132	0/0:10,0:10:15.01:0,15,174	./.	./.	0/0:18,0:14:2.99:0,3,24	0/1:22,4:26:8.23:41,0,8	1/1:19,14:33:7.45:127,7,0	./.	0/0:16,0:16:24.01:0,24,416	0/1:31,0:35:32.23:147,0,32	0/1:14,0:16:0.01:0,0,1	0/0:18,0:18:12.20:0,12,317	0/1:18,0:20:20.30:20,0,201	0/0:11,0:10:11.36:0,11,111	0/1:12,0:14:10.13:10,0,182	0/0:28,0:28:5.32:0,5,500	0/1:35,1:36:11.93:12,0,620	0/1:24,0:23:10.85:11,0,64	0/1:23,0:22:21.97:22,0,61	0/1:19,0:17:7.54:8,0,27	0/0:24,0:23:8.67:0,9,51	0/0:21,0:22:44.41:0,44,530	0/0:19,0:24:2.79:0,3,27	0/0:23,0:28:18.50:0,19,236	0/0:14,0:13:8.03:0,8,56	0/1:27,0:27:2.18:2,0,70	0/0:19,0:19:4.91:0,5,43	0/1:11,0:10:8.38:8,0,36
chr10	69152385	.	C	CTGGAGG	5587.48	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=12.312;DP=494;FS=3.939;HRun=0;HaplotypeScore=130.0625;InbreedingCoeff=0.9238;MQ=96.15;MQ0=0;MQRankSum=-12.276;QD=73.52;ReadPosRankSum=3.536;VQSLOD=5.4595;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,10:10:23.56:782,24,0	0/0:10,0:10:30.10:0,30,769	0/0:27,0:27:73.12:0,73,1756	0/0:23,0:23:66.20:0,66,1600	1/1:0,4:4:6.02:191,6,0	0/0:30,0:30:87.30:0,87,2199	0/0:42,0:42:99:0,126,3224	1/1:0,4:4:9.03:313,9,0	0/0:29,0:29:81.18:0,81,1883	1/1:1,0:10:20.53:739,21,0	1/1:1,0:3:6.01:103,6,0	0/0:19,0:19:54.17:0,54,1327	0/0:22,0:22:66.21:0,66,1571	0/0:28,0:28:84.25:0,84,1913	0/0:24,0:24:72.25:0,72,1818	0/0:18,0:18:54.19:0,54,1374	0/0:31,0:31:93.32:0,93,2341	1/1:0,7:7:21.07:725,21,0	1/1:0,1:2:3.01:40,3,0	1/1:0,10:9:21.05:683,21,0	1/1:1,6:7:9.03:236,9,0	0/0:19,0:19:57.20:0,57,1446	0/0:25,0:25:72.25:0,72,1776	0/0:43,0:43:99:0,126,3096	0/0:28,0:28:84.25:0,84,1948	1/1:0,6:6:18.06:622,18,0	1/1:1,6:7:18.06:537,18,0	1/1:0,6:6:18.06:617,18,0
chr10	69152388	.	TTTA	T	2327.83	PASS	AC=22;AF=0.407;AN=54;BaseQRankSum=12.752;DP=492;FS=4.669;HRun=0;HaplotypeScore=106.8015;InbreedingCoeff=0.9401;MQ=97.01;MQ0=0;MQRankSum=-12.780;QD=33.25;ReadPosRankSum=2.086;VQSLOD=4.2997;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,10:10:25.63:333,26,0	0/0:10,0:10:30.10:0,30,739	0/0:27,0:27:79.15:0,79,1803	0/0:25,0:25:75.26:0,75,1708	1/1:0,4:4:6.02:78,6,0	0/0:33,0:33:99:0,99,2400	0/0:43,0:43:99:0,129,3141	1/1:0,4:4:9.03:143,9,0	0/0:28,0:28:84.28:0,84,1996	1/1:9,0:9:27.09:415,27,0	1/1:2,0:2:3.01:38,3,0	0/0:19,0:19:57.18:0,57,1357	0/0:21,0:21:63.19:0,63,1436	0/0:28,0:28:84.29:0,84,2071	0/0:25,0:25:75.26:0,75,1839	0/0:18,0:18:54.19:0,54,1311	0/0:31,0:31:93.29:0,93,2171	1/1:0,7:7:21.07:327,21,0	./.	1/1:0,10:9:24.18:294,24,0	1/1:0,6:6:12.14:149,12,0	0/0:19,0:19:57.15:0,57,1351	0/0:25,0:25:75.26:0,75,1831	0/0:41,0:41:99:0,123,2977	0/0:27,0:27:81.28:0,81,1976	1/1:0,6:6:18.06:281,18,0	1/1:0,6:6:16.60:204,17,0	1/1:0,6:6:18.06:277,18,0
chr10	69152391	.	A	AGAGGCAT	11379.64	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=15.962;DP=588;FS=17.926;HRun=0;HaplotypeScore=199.0036;InbreedingCoeff=0.9845;MQ=90.29;MQ0=0;MQRankSum=-16.258;QD=68.55;ReadPosRankSum=-0.992;VQSLOD=3.0897;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:21:38.58:1216,39,0	0/0:10,0:10:30.10:0,30,836	0/0:28,0:28:82.08:0,82,1947	0/0:25,0:25:72.25:0,72,1821	1/1:11,0:11:14.67:330,15,0	0/0:34,0:34:99:0,102,2525	0/0:42,0:42:99:0,126,3294	1/1:11,0:11:27.05:744,27,0	0/0:29,0:29:81.26:0,81,2131	1/1:14,9:23:66.22:2448,66,0	1/1:8,2:10:9.02:268,9,0	0/0:18,0:18:54.19:0,54,1509	0/0:19,0:19:54.15:0,54,1391	0/0:29,0:29:84.27:0,84,2287	0/0:24,0:24:69.22:0,69,1858	0/0:18,0:18:54.14:0,54,1293	0/0:30,0:30:84.29:0,84,2332	1/1:13,0:13:39.13:1304,39,0	1/1:10,0:9:24.08:777,24,0	1/1:24,0:23:42.13:1327,42,0	1/1:10,0:10:15.04:439,15,0	0/0:19,0:19:57.18:0,57,1485	0/0:28,0:28:78.27:0,78,2098	0/0:42,0:42:99:0,120,3224	0/0:27,0:27:81.26:0,81,2167	1/1:18,0:18:42.14:1411,42,0	1/1:9,0:9:18.06:554,18,0	1/1:6,0:6:18.06:563,18,0
chr10	69152634	.	T	TAAAAAAATAAATTTC	18420.15	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-1.334;DP=531;FS=7.739;HRun=0;HaplotypeScore=193.4997;InbreedingCoeff=0.9697;MQ=75.62;MQ0=1;MQRankSum=-9.884;QD=85.68;ReadPosRankSum=-4.158;VQSLOD=2.6091;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,13:23:21.07:1515,21,0	0/0:9,0:9:24.05:0,24,727	0/0:18,0:17:26.56:0,27,516	0/0:23,0:22:42.05:0,42,981	1/1:5,8:18:12.02:323,12,0	0/0:26,0:26:72.24:0,72,2675	0/0:14,0:14:36.10:0,36,822	1/1:7,0:41:99:4596,111,0	0/0:15,0:15:39.13:0,39,1270	1/1:7,0:26:48.05:1331,48,0	1/1:3,0:13:24.07:1346,24,0	0/0:17,0:17:48.16:0,48,1861	0/0:13,0:13:27.07:0,27,730	0/0:27,0:27:57.19:0,57,2167	0/0:22,0:22:63.21:0,63,2297	0/0:17,0:17:45.15:0,45,1616	0/0:20,0:20:60.18:0,60,2011	1/1:1,6:12:6.02:268,6,0	1/1:2,9:18:51.17:2753,51,0	1/1:2,8:13:15.04:728,15,0	1/1:5,0:10:18.04:568,18,0	0/0:23,0:23:66.22:0,66,2098	0/0:23,0:23:63.21:0,63,2103	0/0:26,0:26:72.23:0,72,2407	0/0:23,0:23:54.15:0,54,1521	1/1:1,13:23:60.21:3387,60,0	1/1:1,4:11:12.04:865,12,0	1/1:0,0:7:15.05:740,15,0
chr10	69153023	.	C	CT	2137.51	PASS	AB=0.909;AC=26;AF=0.464;AN=56;BaseQRankSum=-0.664;DP=285;FS=4.805;HRun=1;HaplotypeScore=64.1183;InbreedingCoeff=0.7636;MQ=75.26;MQ0=0;MQRankSum=-1.546;QD=13.44;ReadPosRankSum=-1.287;VQSLOD=2.1355;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,1:10:10.14:83,10,0	0/0:2,0:2:3.01:0,3,40	0/0:14,0:13:23.67:0,24,180	0/1:12,0:10:6.33:6,0,32	1/1:5,0:5:9:95,9,0	0/0:12,0:12:23.97:0,24,252	0/0:9,0:9:12.01:0,12,143	1/1:7,2:9:14.98:135,15,0	0/0:8,0:9:21.03:0,21,249	1/1:4,3:7:17.91:154,18,0	1/1:4,3:7:14.56:107,15,0	0/0:9,0:10:14.77:0,15,158	0/0:7,0:7:6.02:0,6,80	0/0:5,0:5:11.84:0,12,112	0/1:7,0:9:8.62:9,0,86	0/0:6,0:7:14.95:0,15,146	0/0:16,0:17:35.94:0,36,410	1/1:19,7:26:51:593,51,0	1/1:7,4:11:33:326,33,0	1/1:9,0:9:14.98:125,15,0	1/1:20,7:26:48.39:432,48,0	0/0:4,0:5:8.86:0,9,92	0/0:10,0:10:18.02:0,18,188	0/0:8,0:9:17.87:0,18,220	0/0:9,0:9:11.84:0,12,104	1/1:2,2:4:5.85:54,6,0	1/1:4,2:18:14.95:130,15,0	1/1:4,1:5:9.01:101,9,0
chr10	69153032	.	G	GA	901.02	PASS	AB=0.657;AC=21;AF=0.375;AN=56;BaseQRankSum=6.928;DP=274;FS=13.790;HRun=0;HaplotypeScore=56.1393;InbreedingCoeff=0.6073;MQ=74.11;MQ0=0;MQRankSum=-4.439;QD=7.15;ReadPosRankSum=-0.303;VQSLOD=1.8448;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,0:11:5.62:56,6,0	0/0:3,0:3:9.01:0,9,93	0/0:19,0:17:42.80:0,43,373	0/0:14,0:11:19.05:0,19,127	0/1:3,3:6:10.04:41,0,10	0/0:8,0:8:21.92:0,22,244	0/0:10,0:10:30.03:0,30,306	1/1:3,5:10:13.02:146,13,0	0/0:10,0:10:29.92:0,30,302	0/1:3,4:7:2.56:61,0,3	0/1:3,3:6:4.07:58,0,4	0/0:10,0:10:15.03:0,15,179	0/0:7,0:7:20.74:0,21,182	0/0:3,0:3:9.01:0,9,106	0/0:7,0:7:4.57:0,5,146	0/0:7,0:7:20.93:0,21,187	0/0:17,0:17:48.04:0,48,528	1/1:12,6:24:16.28:223,16,0	1/1:9,1:13:2.19:127,2,0	1/1:5,0:5:2.97:23,3,0	1/1:16,2:20:2.44:132,2,0	0/0:5,0:5:8.98:0,9,101	0/0:6,0:6:14.24:0,14,142	0/0:11,0:11:27.81:0,28,328	0/0:11,0:10:23.85:0,24,214	1/1:2,0:6:6.88:81,7,0	1/1:10,0:12:2.46:100,2,0	1/1:4,0:5:5.58:33,6,0
chr10	69153632	.	A	AC	1938.05	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=3.760;DP=703;FS=4.428;HRun=1;HaplotypeScore=71.0530;InbreedingCoeff=0.9422;MQ=91.13;MQ0=0;MQRankSum=-4.460;QD=40.38;ReadPosRankSum=1.153;VQSLOD=4.3233;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,132,1713	0/0:8,0:8:21.07:0,21,273	0/0:29,0:29:81.73:0,82,1031	0/0:27,0:27:75.21:0,75,941	0/0:27,0:27:78.24:0,78,999	0/0:24,0:24:69.22:0,69,896	0/0:25,0:25:75.22:0,75,958	0/0:33,0:33:93.28:0,93,1183	0/0:21,0:21:63.19:0,63,804	1/1:0,28:29:87.29:1295,87,0	1/1:0,19:19:51.17:764,51,0	0/0:21,0:21:60.19:0,60,779	0/0:28,0:28:81.26:0,81,1050	0/0:18,0:18:54.15:0,54,685	0/0:26,0:26:78.25:0,78,1012	0/0:25,0:25:75.24:0,75,973	0/0:22,0:22:66.21:0,66,856	0/0:17,0:17:51.17:0,51,662	0/0:19,0:19:54.16:0,54,674	0/0:31,0:31:90.29:0,90,1169	0/0:29,0:29:81.26:0,81,1052	0/0:34,0:34:99:0,99,1284	0/0:26,0:26:72.22:0,72,919	0/0:33,0:33:96.27:0,96,1226	0/0:20,0:20:60.19:0,60,778	0/0:30,2:32:6.36:0,6,1077	0/0:30,0:30:84.27:0,84,1089	0/0:5,0:5:15.05:0,15,195
chr10	69153790	.	GCCA	G	2277.28	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.284;DP=654;FS=8.493;HRun=0;HaplotypeScore=102.1636;InbreedingCoeff=0.9914;MQ=79.18;MQ0=1;MQRankSum=-4.483;QD=34.50;ReadPosRankSum=2.682;VQSLOD=4.3825;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,43:45:99:1617,99,0	0/0:6,0:6:18.06:0,18,402	0/0:23,0:23:63.20:0,63,1364	0/0:28,1:29:58.15:0,58,1522	1/1:1,18:21:48.16:782,48,0	0/0:24,0:24:69.23:0,69,1478	0/0:29,0:29:87.26:0,87,1891	0/0:27,0:27:75.26:0,75,1654	0/0:27,0:27:78.27:0,78,1692	0/0:28,0:28:78.26:0,78,1673	0/0:10,0:10:30.10:0,30,668	0/0:19,0:19:51.15:0,51,1057	0/0:21,0:21:60.19:0,60,1274	0/0:15,0:15:42.14:0,42,916	0/0:24,0:24:69.24:0,69,1516	0/0:22,0:22:66.23:0,66,1451	0/0:34,0:33:96.33:0,96,2131	0/0:23,0:23:66.23:0,66,1446	0/0:13,0:13:36.12:0,36,802	0/0:24,0:24:63.22:0,63,1407	0/0:34,0:34:99:0,99,2212	0/0:25,0:25:69.23:0,69,1496	0/0:25,0:25:75.26:0,75,1673	0/0:20,0:20:57.20:0,57,1274	0/0:28,0:28:81.28:0,81,1804	0/0:26,0:26:66.23:0,66,1452	0/0:26,0:26:78.27:0,78,1721	0/0:6,0:6:18.06:0,18,400
chr10	69154652	.	TTGTTTAGGAAGTC	T	1752.84	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.779;DP=540;FS=11.195;HRun=0;HaplotypeScore=211.0867;InbreedingCoeff=0.9957;MQ=89.37;MQ0=0;MQRankSum=-5.862;QD=58.43;ReadPosRankSum=0.078;VQSLOD=2.4208;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,132,7736	0/0:7,0:7:21.07:0,21,1366	0/0:24,0:24:68.58:0,69,3425	0/0:24,0:24:72.11:0,72,3421	0/0:13,0:13:33.10:0,33,2000	0/0:18,0:18:54.17:0,54,3221	0/0:21,0:21:63.22:0,63,3969	0/0:34,0:34:96.32:0,96,5219	0/0:14,0:14:42.14:0,42,2768	1/1:4,9:13:24.08:806,24,0	1/1:4,13:17:27.09:1068,27,0	0/0:16,0:16:45.13:0,45,2394	0/0:16,0:16:48.16:0,48,2862	0/0:20,0:20:60.21:0,60,3850	0/0:15,0:15:45.15:0,45,2890	0/0:17,0:17:51.16:0,51,2937	0/0:36,0:36:99:0,105,6597	0/0:20,0:20:60.16:0,60,3458	0/0:21,0:21:63.20:0,63,3781	0/0:14,0:14:39.13:0,39,2510	0/0:34,0:34:96.33:0,96,6029	0/0:13,0:13:39.13:0,39,2394	0/0:17,0:17:48.16:0,48,2901	0/0:19,0:19:57.19:0,57,3470	0/0:13,0:13:36.12:0,36,2191	0/0:15,0:15:42.14:0,42,2703	0/0:15,0:15:45.15:0,45,2522	0/0:10,0:10:30.10:0,30,1991
chr10	69154866	.	CCT	C	7751.86	PASS	AB=0.938;AC=25;AF=0.446;AN=56;BaseQRankSum=14.038;DP=610;FS=1.889;HRun=0;HaplotypeScore=91.3098;InbreedingCoeff=0.9513;MQ=82.51;MQ0=5;MQRankSum=-0.281;QD=27.49;ReadPosRankSum=0.797;VQSLOD=6.2074;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,40:44:87.38:1350,87,0	0/1:14,1:15:2.06:2,0,510	0/0:31,0:28:52.04:0,52,658	0/0:30,0:26:27.11:0,27,399	1/1:4,18:22:54.17:687,54,0	0/0:24,0:24:66.23:0,66,1099	0/0:21,0:22:60.19:0,60,958	1/1:2,17:19:48.15:610,48,0	0/0:18,0:18:51.17:0,51,852	1/1:5,17:22:54.13:656,54,0	1/1:2,16:17:39.08:478,39,0	0/0:19,0:19:54.17:0,54,855	0/0:11,0:11:30.09:0,30,469	0/0:21,1:22:18.99:0,19,838	0/0:16,0:16:42.13:0,42,677	0/0:8,0:8:24.08:0,24,402	0/0:33,0:33:84.27:0,84,1370	1/1:5,29:33:66.21:837,66,0	1/1:4,16:19:51.14:627,51,0	1/1:8,16:24:48.06:573,48,0	1/1:3,20:24:48.09:591,48,0	0/0:13,0:13:30.09:0,30,476	0/0:26,0:26:25.19:0,25,965	0/0:35,0:35:90.31:0,90,1499	0/0:20,0:20:45.15:0,45,750	1/1:1,21:22:63.14:767,63,0	1/1:0,11:11:30.10:382,30,0	1/1:0,6:6:15.05:191,15,0
chr10	69155498	.	G	GA	1227.61	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.586;DP=574;FS=5.144;HRun=6;HaplotypeScore=70.1961;InbreedingCoeff=0.9994;MQ=82.30;MQ0=0;MQRankSum=-0.874;QD=27.28;ReadPosRankSum=-0.660;VQSLOD=3.8381;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:66.15:0,66,673	0/0:12,0:12:36.08:0,36,367	0/0:15,0:15:36.07:0,36,362	0/0:20,0:20:45:0,45,437	0/0:19,0:19:54.12:0,54,550	0/0:14,0:14:36.08:0,36,367	0/0:19,0:19:48.10:0,48,485	0/0:26,0:25:69.11:0,69,689	0/0:25,0:25:57.12:0,57,581	1/1:4,26:30:78.24:970,78,0	1/1:3,12:14:33.02:379,33,0	0/0:25,0:25:60.11:0,60,599	0/0:24,0:24:63.11:0,63,633	0/0:18,0:18:42.08:0,42,421	0/0:16,0:16:45.10:0,45,459	0/0:18,0:18:54.09:0,54,536	0/0:21,0:21:57.10:0,57,572	0/0:30,0:30:78.12:0,78,776	0/0:22,0:22:60.11:0,60,604	0/0:21,0:21:51.11:0,51,520	0/0:22,0:22:57.13:0,57,581	0/0:12,0:12:33.08:0,33,337	0/0:16,0:16:48.09:0,48,482	0/0:25,0:25:72.15:0,72,728	0/0:11,0:11:33.08:0,33,337	0/0:25,0:25:66.14:0,66,673	0/0:31,0:31:75.16:0,75,765	0/0:19,0:19:57.09:0,57,562
chr10	69156787	.	GACCC	G	3773.02	PASS	AB=0.977;AC=17;AF=0.304;AN=56;BaseQRankSum=13.602;DP=441;FS=3.855;HRun=0;HaplotypeScore=91.2469;InbreedingCoeff=0.4059;MQ=62.58;MQ0=0;MQRankSum=-4.494;QD=16.92;ReadPosRankSum=9.548;VQSLOD=2.4067;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:24,1:25:24.05:395,0,24	0/0:6,0:6:15.05:0,15,364	0/0:10,0:10:19.06:0,19,424	0/0:10,0:10:30.01:0,30,518	0/1:11,1:11:26.01:141,0,26	0/0:16,0:16:45.03:0,45,816	0/0:13,0:14:39.08:0,39,742	0/1:20,0:20:67.52:253,0,68	0/0:22,0:22:60.18:0,60,1352	1/1:23,2:25:72.92:650,73,0	0/1:19,1:20:20.94:301,0,21	0/0:14,0:14:42.13:0,42,951	0/0:10,0:10:30.10:0,30,717	0/0:16,0:16:42.06:0,42,845	0/0:22,0:22:66.17:0,66,1382	0/0:11,0:11:27.05:0,27,430	0/0:17,0:17:33.07:0,33,698	0/1:12,0:12:9.09:199,0,9	0/1:11,0:11:71.93:108,0,72	1/1:16,2:18:22.94:404,23,0	1/1:37,0:37:41.70:607,42,0	0/0:5,0:5:15.04:0,15,283	0/0:11,0:11:33.10:0,33,749	0/0:19,0:19:51.17:0,51,1137	0/0:15,0:14:39.03:0,39,675	0/1:15,0:15:18.09:248,0,18	1/1:22,0:22:31.93:391,32,0	1/1:6,0:6:8.99:77,9,0
chr10	69156788	.	ACCCC	A	7616.47	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=7.075;DP=442;FS=4.886;HRun=11;HaplotypeScore=79.1006;InbreedingCoeff=0.9788;MQ=62.58;MQ0=0;MQRankSum=-4.455;QD=34.31;ReadPosRankSum=7.856;VQSLOD=3.1577;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,20:25:54.17:844,54,0	0/0:4,0:6:15.05:0,15,330	0/0:9,0:10:18.53:0,19,385	0/0:10,0:10:21.07:0,21,411	1/1:2,9:10:18.06:281,18,0	0/0:11,0:16:36.10:0,36,671	0/0:15,0:15:30.09:0,30,603	1/1:5,14:20:42.07:608,42,0	0/0:18,0:22:54.18:0,54,1117	1/1:2,23:25:75.24:1149,75,0	1/1:4,16:20:36.10:563,36,0	0/0:13,0:14:39.12:0,39,800	0/0:9,0:10:30.10:0,30,595	0/0:14,0:15:33.11:0,33,701	0/0:19,0:21:54.10:0,54,1114	0/0:7,0:11:17.97:0,18,277	0/0:13,0:19:33.11:0,33,677	1/1:2,10:12:30.08:469,30,0	1/1:5,6:11:15.01:235,15,0	1/1:3,15:18:45.15:703,45,0	1/1:3,34:37:84.27:1314,84,0	0/0:4,0:4:12.03:0,12,202	0/0:10,0:11:30.09:0,30,579	0/0:15,0:21:57.16:0,57,1126	0/0:11,0:14:30:0,30,489	1/1:3,12:15:36.10:563,36,0	1/1:1,20:22:48.16:746,48,0	1/1:0,6:6:9.03:141,9,0
chr10	69156952	.	C	CA	2492.81	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=4.112;DP=516;FS=7.760;HRun=8;HaplotypeScore=92.4546;InbreedingCoeff=0.8751;MQ=68.14;MQ0=21;MQRankSum=-1.370;QD=14.58;ReadPosRankSum=-0.757;VQSLOD=3.1370;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:19,2:21:24.96:225,25,0	0/0:9,0:9:18.89:0,19,207	0/0:52,0:21:32.59:0,33,286	0/0:39,0:14:9.74:0,10,52	1/1:17,1:18:38.96:366,39,0	0/0:17,0:17:24.71:0,25,396	0/0:22,0:22:45.76:0,46,439	1/1:26,1:26:36.33:388,36,0	0/0:8,0:8:10.54:0,11,124	0/0:18,0:15:12.34:0,12,41	0/0:16,0:15:13.08:0,13,38	0/0:15,0:15:26.33:0,26,297	0/0:17,0:16:11.63:0,12,257	0/0:15,0:14:30.69:0,31,317	0/0:20,0:20:0.53:0,1,269	0/0:16,0:16:14.28:0,14,262	0/0:20,0:20:11.49:0,11,270	1/1:20,1:21:32.80:425,33,0	1/1:14,2:15:27.98:312,28,0	1/1:15,1:15:16.65:205,17,0	1/1:10,0:10:3:27,3,0	0/0:13,0:13:7.02:0,7,165	0/0:13,0:12:12.68:0,13,218	0/0:18,0:18:28.45:0,28,311	0/0:16,0:16:35.57:0,36,427	1/1:9,1:10:20.69:204,21,0	1/1:19,2:20:36.60:428,37,0	1/1:10,1:10:9.23:122,9,0
chr10	69156953	.	AAAAC	A	3051.34	PASS	AB=1.000;AC=27;AF=0.482;AN=56;BaseQRankSum=8.306;DP=522;FS=22.177;HRun=0;HaplotypeScore=109.5107;InbreedingCoeff=0.7635;MQ=66.90;MQ0=21;MQRankSum=-4.131;QD=10.71;ReadPosRankSum=0.193;VQSLOD=1.5561;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,16:21:16.50:341,17,0	0/0:9,0:9:26.99:0,27,349	0/0:51,0:19:29.12:0,29,308	0/1:43,0:15:17.65:18,0,45	1/1:3,15:18:41.36:444,41,0	0/0:17,0:17:31.98:0,32,522	0/0:22,0:22:5.66:0,6,465	1/1:9,18:26:51.23:437,51,0	0/0:9,0:9:5.79:0,6,125	1/1:17,0:14:34.42:211,34,0	1/1:17,0:16:15.25:147,15,0	0/0:15,0:15:38.73:0,39,432	0/0:17,0:16:32.80:0,33,412	0/0:15,0:14:27.85:0,28,398	0/0:21,0:21:25.35:0,25,509	0/0:16,0:16:36.01:0,36,525	0/1:21,0:21:9.30:9,0,415	1/1:21,0:21:40.31:275,40,0	1/1:17,0:16:30.08:219,30,0	1/1:14,0:13:30.12:264,30,0	1/1:1,8:9:3.01:53,3,0	0/0:13,0:13:18.70:0,19,179	0/0:14,0:13:29.50:0,29,231	0/1:18,0:18:1.21:1,0,402	0/0:18,0:18:42.85:0,43,601	1/1:9,0:9:23.49:176,23,0	1/1:20,1:20:58.94:438,59,0	1/1:4,7:10:17.79:232,18,0
chr10	69156954	.	AAAC	A	2715.90	PASS	AB=1.000;AC=27;AF=0.482;AN=56;BaseQRankSum=8.202;DP=525;FS=33.282;HRun=0;HaplotypeScore=102.5766;InbreedingCoeff=0.7323;MQ=66.50;MQ0=23;MQRankSum=-4.183;QD=9.50;ReadPosRankSum=-0.060;VQSLOD=1.5323;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:20:9.89:237,10,0	0/0:9,0:9:26.42:0,26,275	0/0:52,0:18:29.88:0,30,283	0/1:44,0:15:5.10:5,0,43	1/1:18,0:18:38.52:341,39,0	0/0:17,0:17:15.06:0,15,394	0/0:22,0:22:12.34:0,12,353	1/1:27,1:27:36.20:397,36,0	0/0:9,0:9:1.19:0,1,89	1/1:18,0:14:33.94:165,34,0	1/1:17,0:16:14.54:108,15,0	0/0:14,0:14:34.53:0,35,323	0/0:17,0:16:32.27:0,32,323	0/0:15,0:14:7.36:0,7,281	0/0:21,0:21:20.05:0,20,370	0/0:16,0:16:35.21:0,35,397	0/1:21,0:21:28.36:28,0,297	1/1:18,2:20:45.76:357,46,0	1/1:18,0:17:21.66:204,22,0	1/1:2,12:13:31.93:284,32,0	1/1:8,0:8:3.01:40,3,0	0/0:14,0:14:6.97:0,7,135	0/0:14,0:13:29.34:0,29,206	0/1:18,0:18:2.29:2,0,320	0/0:19,0:19:29.24:0,29,473	1/1:1,8:9:23.50:202,23,0	1/1:22,0:21:59.85:375,60,0	1/1:11,0:10:17.03:180,17,0
chr10	69156962	.	AAAAAAAAAAAAAAAAAAAC	A	1965.70	PASS	AB=0.632;AC=3;AF=0.054;AN=56;BaseQRankSum=6.626;DP=534;FS=8.710;HRun=0;HaplotypeScore=232.7334;InbreedingCoeff=0.6427;MQ=58.23;MQ0=27;MQRankSum=-3.060;QD=70.20;ReadPosRankSum=5.081;VQSLOD=2.0340;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:21:36.12:0,36,1614	0/0:10,0:10:30.10:0,30,1941	0/0:57,0:14:35.31:0,35,1169	0/0:47,0:13:23.69:0,24,381	0/0:19,0:21:51.17:0,51,2268	0/0:14,0:14:42.14:0,42,3157	0/0:22,0:22:66.19:0,66,4099	0/0:29,0:29:74.06:0,74,3479	0/0:8,0:8:24.08:0,24,1496	0/1:5,7:8:11.58:1014,0,12	1/1:1,15:15:29.85:1057,30,0	0/0:17,0:17:48.16:0,48,2982	0/0:17,0:16:42.14:0,42,2587	0/0:17,0:16:39.13:0,39,2763	0/0:18,0:18:54.18:0,54,3886	0/0:19,0:18:45.14:0,45,3230	0/0:21,0:21:55.43:0,55,3582	0/0:20,0:20:52.42:0,52,3093	0/0:14,0:17:49.41:0,49,2275	0/0:13,0:12:33.11:0,33,1913	0/0:10,0:10:9.03:0,9,322	0/0:10,0:10:27.09:0,27,1417	0/0:12,0:11:27.09:0,27,1618	0/0:16,0:16:40.85:0,41,2803	0/0:21,0:21:63.21:0,63,3822	0/0:10,0:10:24.08:0,24,1376	0/0:24,0:24:72.24:0,72,3901	0/0:11,0:10:18.06:0,18,1053
chr10	69157340	.	TCGGGGCCTGCA	T	2012.54	PASS	AB=0.966;AC=5;AF=0.089;AN=56;BaseQRankSum=8.339;DP=661;FS=1.617;HRun=0;HaplotypeScore=210.3655;InbreedingCoeff=0.7651;MQ=89.22;MQ0=0;MQRankSum=-7.080;QD=37.27;ReadPosRankSum=-0.104;VQSLOD=2.8838;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:99:0,99,5554	0/0:14,0:14:42.14:0,42,2236	0/0:22,0:22:53.37:0,53,2972	0/0:29,0:29:83.64:0,84,3747	0/0:30,0:30:84.27:0,84,4631	0/0:25,0:25:75.02:0,75,3728	0/0:35,0:35:99:0,99,5061	0/0:22,0:22:66.18:0,66,3104	0/0:24,0:24:72.25:0,72,4108	1/1:0,21:21:57.12:1834,57,0	1/1:0,5:5:12:276,12,0	0/0:13,0:13:36.11:0,36,1878	0/0:22,0:22:66.22:0,66,3436	0/0:21,0:21:63.13:0,63,3375	0/0:32,0:32:96.30:0,96,5219	0/0:14,0:14:42.14:0,42,2177	0/0:30,0:30:87.24:0,87,4576	0/0:25,0:25:72.25:0,72,4058	0/0:23,0:23:66.17:0,66,3157	0/0:15,0:15:45.15:0,45,2537	0/0:46,0:46:99:0,138,7007	0/0:25,0:25:75.21:0,75,3816	0/0:22,0:22:62.24:0,62,3077	0/0:31,0:31:93.25:0,93,4807	0/0:19,0:19:54.19:0,54,2847	0/1:27,1:28:27.54:28,0,4007	0/0:17,0:17:51.11:0,51,2574	0/0:17,0:17:51.18:0,51,2938
chr10	69157846	.	C	CTCTTCCTCTTCTTTT	21689.46	PASS	AB=0.797;AC=20;AF=0.357;AN=56;BaseQRankSum=1.588;DP=574;FS=29.441;HRun=0;HaplotypeScore=219.7124;InbreedingCoeff=0.7998;MQ=71.79;MQ0=1;MQRankSum=-13.464;QD=97.70;ReadPosRankSum=-2.544;VQSLOD=2.7697;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,8:33:39.13:2507,39,0	0/0:4,0:4:9.03:0,9,361	0/0:15,0:14:11.27:0,11,415	0/0:19,0:17:20.28:0,20,885	1/1:7,16:27:69.20:4113,69,0	0/0:18,0:18:45.13:0,45,1542	0/1:16,0:15:42.97:43,0,1446	1/1:26,0:26:69.20:2736,69,0	0/0:27,0:27:78.25:0,78,3265	0/0:21,0:21:57.16:0,57,1732	0/0:22,0:22:57.10:0,57,2070	0/0:26,0:26:78.25:0,78,3077	0/0:12,0:12:33.11:0,33,1390	0/0:18,0:18:51.14:0,51,1813	0/0:34,0:34:99:0,102,3596	0/0:28,0:28:81.22:0,81,2811	0/0:31,0:31:84.21:0,84,2981	1/1:4,1:11:6.02:422,6,0	1/1:13,3:28:78.17:3493,78,0	1/1:7,5:23:42.01:1897,42,0	1/1:6,1:9:12.04:530,12,0	0/0:22,0:22:63.18:0,63,2162	0/0:22,0:22:63.09:0,63,2102	0/0:22,0:22:63.10:0,63,2316	0/0:10,0:10:30.06:0,30,998	0/1:7,9:22:77.87:3294,0,78	1/1:1,9:24:26.55:1990,27,0	1/1:1,2:3:9.03:664,9,0
chr10	69158579	.	G	GT	2261.63	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-9.802;DP=704;FS=19.484;HRun=2;HaplotypeScore=70.5973;InbreedingCoeff=0.9978;MQ=66.92;MQ0=0;MQRankSum=1.750;QD=37.08;ReadPosRankSum=0.405;VQSLOD=1.7523;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:87.27:0,87,1078	0/0:12,0:12:36.11:0,36,446	0/0:31,0:31:81.23:0,81,971	0/0:19,0:19:57.16:0,57,679	0/0:25,0:25:75.24:0,75,929	0/0:31,0:31:90.28:0,90,1116	0/0:18,0:18:54.17:0,54,669	0/0:31,0:31:90.28:0,90,1116	0/0:24,0:24:69.22:0,69,855	1/1:2,30:32:90.28:1260,90,0	1/1:0,29:29:78.26:1123,78,0	0/0:35,0:35:99:0,99,1226	0/0:22,0:22:66.21:0,66,818	0/0:14,0:14:39.12:0,39,483	0/0:26,0:26:75.24:0,75,930	0/0:25,0:25:63.18:0,63,767	0/0:26,0:26:75.24:0,75,930	0/0:17,0:17:48.12:0,48,580	0/0:25,0:25:72.23:0,72,891	0/0:22,0:22:54.16:0,54,657	0/0:31,0:31:84.25:0,84,1029	0/0:15,0:15:45.13:0,45,545	0/0:36,0:36:99:0,99,1214	0/0:22,0:22:63.20:0,63,780	0/0:27,0:27:72.21:0,72,879	0/0:33,0:33:99:0,99,1215	0/0:38,0:38:99:0,99,1214	0/0:8,0:8:21.07:0,21,260
chr10	69159007	.	CT	C	1661	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.545;DP=745;FS=1.449;HRun=9;HaplotypeScore=94.2766;InbreedingCoeff=0.9628;MQ=71.89;MQ0=2;MQRankSum=0.911;QD=23.39;ReadPosRankSum=1.958;VQSLOD=4.0914;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,99,1090	0/0:11,0:11:30.09:0,30,346	0/0:24,1:21:22.53:0,23,477	0/0:27,0:23:38.24:0,38,448	0/0:26,0:27:59.21:0,59,706	0/0:21,0:21:51.15:0,51,589	0/0:30,0:31:90.04:0,90,993	0/0:38,2:40:38.31:0,38,924	0/0:19,0:19:45.12:0,45,511	1/1:3,35:38:99:933,102,0	1/1:1,32:33:93.05:849,93,0	0/0:24,0:24:66.18:0,66,752	0/0:23,0:23:63.16:0,63,707	0/0:20,1:21:29.69:0,30,585	0/0:33,1:34:68.80:0,69,1026	0/0:22,2:24:8.24:0,8,594	0/0:21,0:21:51.14:0,51,578	0/0:18,0:18:54.08:0,54,586	0/0:24,0:24:54.16:0,54,622	0/0:30,0:30:81.16:0,81,903	0/0:19,0:19:51.14:0,51,578	0/0:26,1:27:44.73:0,45,757	0/0:27,2:29:26.36:0,26,811	0/0:29,0:29:81.24:0,81,934	0/0:33,0:33:90.22:0,90,996	0/0:30,0:29:84.24:0,84,962	0/0:36,1:37:90.18:0,90,999	0/0:14,0:14:27.08:0,27,311
chr10	69159099	.	G	GTA	2230.96	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=3.745;DP=821;FS=0.000;HRun=0;HaplotypeScore=146.6873;InbreedingCoeff=0.9898;MQ=54.75;MQ0=3;MQRankSum=1.939;QD=36.57;ReadPosRankSum=0.980;VQSLOD=5.2814;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:41:55.96:0,56,678	0/0:10,0:10:27.06:0,27,316	0/0:30,0:13:20.99:0,21,224	0/0:24,0:13:17.12:0,17,158	0/0:34,0:34:69.14:0,69,816	0/0:20,0:20:54.14:0,54,659	0/0:22,0:23:51.05:0,51,622	0/0:38,0:38:81.09:0,81,938	0/0:34,0:35:90.23:0,90,1089	1/1:6,27:34:87.22:1330,87,0	1/1:9,18:27:63.20:1022,63,0	0/0:30,0:30:75.22:0,75,938	0/0:22,0:22:63.16:0,63,759	0/0:20,0:20:57.09:0,57,652	0/0:34,0:34:81.14:0,81,931	0/0:28,0:28:66.19:0,66,814	0/0:35,0:35:90.01:0,90,1052	0/0:17,0:17:35.98:0,36,394	0/0:16,0:13:20.99:0,21,231	0/0:56,0:56:99:0,126,1507	0/0:34,0:34:54.11:0,54,630	0/0:28,0:28:71.96:0,72,834	0/0:26,0:26:75.17:0,75,891	0/0:48,0:48:99:0,108,1316	0/0:29,0:29:81.18:0,81,946	0/0:37,0:37:93.12:0,93,1080	0/0:32,0:32:75.12:0,75,869	0/0:12,0:12:30.10:0,30,381
chr10	69159176	.	T	TGTGA	13615.22	PASS	AB=0.650;AC=23;AF=0.411;AN=56;BaseQRankSum=-6.162;DP=777;FS=2.699;HRun=0;HaplotypeScore=201.3667;InbreedingCoeff=0.9248;MQ=53.94;MQ0=3;MQRankSum=-10.479;QD=43.22;ReadPosRankSum=-2.440;VQSLOD=4.4082;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,16:28:29.58:734,30,0	0/0:6,0:6:18.06:0,18,324	0/0:34,0:25:62.23:0,62,1020	0/0:30,0:18:39.60:0,40,662	1/1:6,11:19:23.58:568,24,0	0/0:21,0:21:51.16:0,51,885	0/0:35,0:35:93.29:0,93,1606	1/1:9,27:37:93.25:1966,93,0	0/0:33,0:33:93.31:0,93,1641	1/1:14,19:33:81.19:1794,81,0	1/1:9,12:21:29.50:668,30,0	0/0:38,0:38:99:0,99,1707	0/0:22,0:22:57.19:0,57,996	0/0:24,0:24:66.20:0,66,1127	0/0:33,0:33:81.27:0,81,1440	0/0:23,0:23:66.22:0,66,1149	0/0:45,0:45:99:0,126,2191	0/1:6,7:13:16.42:459,0,16	1/1:10,10:20:51.17:1152,51,0	1/1:11,17:28:42.13:965,42,0	1/1:15,24:39:37.37:1008,37,0	0/0:28,0:28:72.25:0,72,1294	0/0:24,0:24:42.03:0,42,702	0/0:50,0:50:99:0,115,1912	0/0:16,0:16:27.08:0,27,456	1/1:11,17:28:69.19:1587,69,0	1/1:9,28:36:84.24:2028,84,0	1/1:1,9:10:17.48:687,17,0
chr10	69159192	.	CGTGTGT	C	1640.46	PASS	AB=0.823;AC=16;AF=0.296;AN=54;BaseQRankSum=9.535;DP=710;FS=27.652;HRun=0;HaplotypeScore=236.4328;InbreedingCoeff=0.6871;MQ=52.57;MQ0=6;MQRankSum=-9.278;QD=8.87;ReadPosRankSum=-0.388;VQSLOD=1.3934;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:7.95:0,8,244	0/0:7,0:8:21.05:0,21,536	./.	0/0:23,0:9:0:0,0,0	0/0:20,0:23:8.68:0,9,248	0/0:22,0:21:45.12:0,45,1098	0/0:31,0:36:54.18:0,54,1485	0/0:25,0:23:1.83:0,2,18	0/0:30,0:30:69.24:0,69,2130	1/1:16,6:22:18.06:354,18,0	1/1:12,5:18:9.86:159,10,0	0/0:32,0:34:54.20:0,54,1610	0/0:18,0:17:36.11:0,36,1024	0/0:25,0:25:45.11:0,45,1185	0/0:36,0:37:63.22:0,63,1901	0/0:24,0:25:57.20:0,57,1717	0/0:48,0:48:93.26:0,93,2646	0/1:7,4:11:53.38:224,0,53	0/1:19,2:21:26.73:115,0,27	1/1:11,5:16:12.94:204,13,0	1/1:30,3:34:1.18:3,1,0	0/0:29,0:29:57.67:0,58,1610	0/0:10,0:20:30.04:0,30,825	0/0:26,0:47:47.46:0,47,1184	0/0:13,0:13:30.10:0,30,912	1/1:18,3:22:18.04:285,18,0	1/1:24,7:31:15.03:228,15,0	1/1:5,4:9:11.97:247,12,0
chr10	69159232	.	AGAGGTT	A	6089.35	PASS	AB=0.607;AC=19;AF=0.339;AN=56;BaseQRankSum=15.037;DP=596;FS=1.295;HRun=0;HaplotypeScore=195.7181;InbreedingCoeff=0.9121;MQ=65.13;MQ0=3;MQRankSum=-15.770;QD=33.83;ReadPosRankSum=-5.615;VQSLOD=3.6180;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,27:32:63.13:635,63,0	0/0:9,0:9:24.08:0,24,864	0/0:27,0:21:63.22:0,63,2150	0/0:28,0:25:68.60:0,69,2160	1/1:5,12:16:17.42:209,17,0	0/0:16,0:16:45.15:0,45,1607	0/0:26,0:26:63.20:0,63,2187	1/1:9,17:23:51.18:1206,51,0	0/0:32,0:32:90.27:0,90,3075	0/0:22,0:21:63.22:0,63,2116	0/0:22,0:22:57.20:0,57,1980	0/0:29,0:29:81.16:0,81,2586	0/0:16,0:16:45.15:0,45,1607	0/0:14,0:14:42.14:0,42,1484	0/0:28,0:28:84.25:0,84,2887	0/0:20,0:20:57.20:0,57,2053	0/0:36,0:36:90.26:0,90,3178	1/1:2,10:12:24.04:516,24,0	1/1:1,8:7:18.06:426,18,0	1/1:2,12:14:32.98:497,33,0	1/1:4,22:26:38.83:386,39,0	0/0:21,0:21:51.15:0,51,1607	0/0:20,0:20:54.19:0,54,1894	0/0:33,0:33:75.46:0,75,2581	0/0:17,0:17:48.16:0,48,1710	0/1:6,11:15:99:673,0,163	1/1:0,22:22:66.14:1259,66,0	1/1:0,4:4:12.04:284,12,0
chr10	69160076	.	C	CGCGTGTGTGTGT	1440.94	PASS	AB=0.758;AC=8;AF=0.143;AN=56;BaseQRankSum=4.428;DP=744;FS=2.650;HRun=0;HaplotypeScore=241.8062;InbreedingCoeff=0.6388;MQ=62.93;MQ0=10;MQRankSum=-5.524;QD=13.99;ReadPosRankSum=-0.460;VQSLOD=2.6013;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:2,23:33:47.42:397,0,47	0/0:12,0:12:33.09:0,33,947	0/0:48,0:26:57.56:0,58,1738	0/0:38,0:24:55.44:0,55,1128	1/1:0,18:20:9.03:341,9,0	0/0:19,0:19:57.20:0,57,1948	0/0:43,0:43:99:0,123,3567	0/0:29,0:29:59.58:0,60,1412	0/0:28,0:28:78.27:0,78,2379	1/1:26,0:25:70.47:555,70,0	1/1:12,0:12:16:205,16,0	0/0:25,0:25:66.70:0,67,2257	0/0:26,0:26:78.24:0,78,2590	0/0:32,0:32:93.29:0,93,2767	0/0:43,0:43:99:0,129,4234	0/0:21,0:21:63.22:0,63,2105	0/0:30,0:30:84.27:0,84,2774	0/1:12,0:12:90.63:91,0,406	0/0:22,0:21:59.91:0,60,1130	0/0:17,0:17:5.01:0,5,296	0/0:31,0:31:7.09:0,7,489	0/0:32,0:32:93.32:0,93,3203	0/0:19,0:19:51.18:0,51,1735	0/0:34,0:34:84.29:0,84,2788	0/0:29,0:28:78.27:0,78,2528	0/0:30,0:30:63.93:0,64,1371	0/0:20,0:20:36.39:0,36,408	0/0:12,0:12:21.04:0,21,342
chr10	69160077	.	ATG	A	1164.30	PASS	AB=0.944;AC=12;AF=0.214;AN=56;BaseQRankSum=5.043;DP=803;FS=3.298;HRun=0;HaplotypeScore=126.4647;InbreedingCoeff=0.2042;MQ=61.22;MQ0=10;MQRankSum=2.449;QD=3.42;ReadPosRankSum=2.089;VQSLOD=2.1176;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:14.73:0,15,126	0/0:11,0:11:24.08:0,24,362	0/1:49,1:27:23.05:23,0,83	0/1:38,1:24:22.82:23,0,107	0/0:27,0:27:8.55:0,9,43	0/0:18,1:19:13.33:0,13,664	0/1:42,2:44:0.43:0,0,912	0/0:27,0:33:43.78:0,44,497	0/0:28,1:29:10.29:0,10,591	0/0:29,0:28:65.05:0,65,676	0/1:20,0:20:0:0,0,1	0/0:25,0:25:5.35:0,5,699	0/0:25,1:26:28.36:0,28,878	0/1:27,3:30:6.50:7,0,747	0/1:41,3:45:31.62:32,0,1058	0/0:20,1:21:7.36:0,7,574	0/1:26,3:29:35.30:35,0,813	0/0:11,0:13:6.01:0,6,65	0/0:21,0:25:29.62:0,30,316	0/0:11,0:21:22.72:0,23,211	0/0:18,0:34:18.49:0,18,190	0/0:31,1:32:43.43:0,43,1133	1/1:4,15:19:39.11:453,39,0	1/1:8,26:34:63.19:731,63,0	0/1:27,3:29:9.50:10,0,735	0/0:21,0:39:74.77:0,75,818	0/0:7,0:21:27.95:0,28,250	0/0:6,0:12:8.98:0,9,75
chr10	69160451	.	TTGTG	T	386.34	PASS	AC=6;AF=0.111;AN=54;BaseQRankSum=2.273;DP=627;FS=1.121;HRun=0;HaplotypeScore=116.9615;InbreedingCoeff=0.6995;MQ=60.86;MQ0=9;MQRankSum=1.634;QD=6.44;ReadPosRankSum=0.936;VQSLOD=2.6794;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:46:30.06:0,30,458	0/0:7,0:9:11.77:0,12,220	0/0:22,0:13:1.25:0,1,3	./.	0/0:12,0:13:3.01:0,3,52	0/0:13,0:13:12.04:0,12,256	0/0:22,0:23:26.83:0,27,553	0/0:33,0:33:34.47:0,34,704	0/0:19,0:20:41.88:0,42,814	0/0:31,0:28:45.11:0,45,918	0/0:18,0:17:2.69:0,3,69	0/0:14,0:14:30.08:0,30,494	0/0:17,0:17:14.77:0,15,295	0/0:16,0:20:35.59:0,36,684	0/0:18,0:18:27.07:0,27,526	0/0:21,0:21:23.86:0,24,499	0/0:22,0:29:55.32:0,55,836	0/0:18,0:21:16.87:0,17,331	0/0:21,0:21:12.04:0,12,230	1/1:16,0:21:1.55:4,2,0	0/0:41,0:41:18.06:0,18,314	0/0:15,0:20:30.57:0,31,566	1/1:6,6:13:15.04:217,15,0	1/1:12,13:26:18.06:283,18,0	0/0:22,0:22:29.84:0,30,624	0/0:26,0:26:45.56:0,46,764	0/0:34,0:34:17.95:0,18,337	0/0:8,0:10:6.02:0,6,121
chr10	69160994	.	CTCCTTCCT	C	151.27	PASS	AB=1.000;AC=9;AF=0.167;AN=54;BaseQRankSum=2.698;DP=177;FS=9.459;HRun=0;HaplotypeScore=46.0671;InbreedingCoeff=0.3831;MQ=70.60;MQ0=2;MQRankSum=2.730;QD=3.69;ReadPosRankSum=-1.931;VQSLOD=-0.1566;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:2,0:3:20.98:46,0,21	0/0:3,0:3:9.03:0,9,239	0/1:18,0:8:19.90:20,0,93	0/0:13,0:9:26.30:0,26,529	1/1:0,5:5:12.03:141,12,0	0/0:8,0:8:24.08:0,24,715	0/0:6,0:6:12.04:0,12,255	0/1:9,0:9:11.84:12,0,217	0/0:8,0:8:18.04:0,18,356	1/1:2,0:2:3.01:40,3,0	1/1:4,0:4:3:26,3,0	0/0:11,0:11:30.10:0,30,879	0/0:8,0:8:24.08:0,24,678	0/0:11,0:11:30.10:0,30,724	0/0:8,0:8:24.08:0,24,569	0/0:9,0:9:24.07:0,24,704	0/0:12,0:12:20.91:0,21,653	0/0:3,0:3:9.03:0,9,240	0/0:6,0:5:15.05:0,15,257	0/0:3,0:3:9.03:0,9,154	0/0:2,0:2:3.01:0,3,52	0/0:6,0:6:15.05:0,15,423	./.	0/0:4,0:4:12.04:0,12,239	0/0:4,0:4:12.04:0,12,466	0/0:6,0:6:15.05:0,15,332	0/0:3,0:3:6.02:0,6,97	0/0:1,0:1:0:0,0,0
chr10	69161586	.	GTC	G	401.73	PASS	AB=0.962;AC=18;AF=0.346;AN=52;BaseQRankSum=3.948;DP=511;FS=0.711;HRun=0;HaplotypeScore=76.2307;InbreedingCoeff=-0.0551;MQ=67.37;MQ0=12;MQRankSum=0.041;QD=1.58;ReadPosRankSum=1.659;VQSLOD=1.5923;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:21,0:21:11.48:11,0,31	./.	./.	0/0:35,0:15:0:0,0,0	0/0:16,0:16:5.47:0,5,26	0/0:16,0:16:20.88:0,21,252	0/0:20,0:20:18.36:0,18,239	0/0:22,0:22:4.21:0,4,23	1/1:9,0:15:11.28:64,11,0	0/0:25,0:25:0.42:0,0,80	0/1:25,0:25:3.36:3,0,11	0/1:16,0:16:22.96:23,0,173	0/0:18,0:18:0.32:0,0,223	0/1:15,0:15:8.62:9,0,239	0/1:14,1:13:17.69:18,0,163	0/1:16,0:16:5.62:6,0,305	0/1:15,1:16:21.66:22,0,120	1/1:11,3:19:18.11:135,18,0	0/1:10,0:12:6.20:6,0,44	0/0:28,0:27:22.38:0,22,190	0/1:23,1:22:38.57:39,0,266	1/1:11,7:17:7.79:51,8,0	0/1:9,2:11:27.15:27,0,38	0/1:12,0:12:2.67:125,0,3	0/0:19,0:19:32.56:0,33,375	0/0:22,1:23:4.28:0,4,301	0/1:16,2:18:11.97:12,0,193	0/0:11,0:11:13.26:0,13,110
chr10	69161881	.	CT	C	11481.40	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=14.959;DP=610;FS=0.296;HRun=2;HaplotypeScore=76.0574;InbreedingCoeff=0.9985;MQ=78.29;MQ0=0;MQRankSum=-4.173;QD=36.92;ReadPosRankSum=0.322;VQSLOD=5.2357;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,34:37:99:1304,102,0	0/0:6,0:6:18.06:0,18,270	0/0:23,0:23:69.21:0,69,975	0/0:12,0:12:36.05:0,36,492	1/1:2,19:21:57.18:739,57,0	0/0:23,0:23:66.22:0,66,988	0/0:25,0:25:72.24:0,72,1076	1/1:0,35:35:99:1347,105,0	0/0:18,0:18:54.18:0,54,805	1/1:0,29:29:87.28:1130,87,0	1/1:4,25:29:78.25:1012,78,0	0/0:27,0:27:78.26:0,78,1158	0/0:17,0:17:48.16:0,48,716	0/0:16,0:16:48.16:0,48,719	0/0:17,0:17:51.16:0,51,743	0/0:18,0:18:54.18:0,54,810	0/0:21,0:21:63.17:0,63,901	1/1:3,24:27:78.25:1011,78,0	1/1:3,18:21:63.19:793,63,0	1/1:1,31:32:93.29:1193,93,0	1/1:2,17:19:54.16:687,54,0	0/0:32,0:31:90.30:0,90,1347	0/0:19,0:19:48.16:0,48,719	0/0:8,0:8:24.08:0,24,360	0/0:17,0:17:51.17:0,51,764	1/1:2,23:25:69.22:896,69,0	1/1:0,25:25:75.24:973,75,0	1/1:3,8:11:33.06:395,33,0
chr10	69161957	.	C	CG	12936.93	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-0.043;DP=616;FS=0.000;HRun=0;HaplotypeScore=69.9434;InbreedingCoeff=0.9981;MQ=86.55;MQ0=0;MQRankSum=-4.670;QD=44.30;ReadPosRankSum=-0.538;VQSLOD=4.9125;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,36:37:94.49:1572,94,0	0/0:6,0:6:18.06:0,18,252	0/0:21,0:21:39.81:0,40,669	0/0:22,0:22:62.88:0,63,838	1/1:1,23:24:69.24:1101,69,0	0/0:27,0:27:78.26:0,78,1090	0/0:22,0:22:63.21:0,63,880	1/1:1,38:39:99:1601,108,0	0/0:24,0:24:69.23:0,69,965	1/1:0,24:24:72.25:1141,72,0	1/1:2,33:36:99:1587,102,0	0/0:24,0:24:72.24:0,72,1007	0/0:29,0:29:87.29:0,87,1217	0/0:10,0:10:27.09:0,27,363	0/0:21,0:21:60.20:0,60,837	0/0:18,0:18:54.18:0,54,754	0/0:20,0:20:60.20:0,60,839	1/1:1,18:18:54.14:834,54,0	1/1:2,22:24:66.22:1053,66,0	1/1:4,22:26:72.25:1141,72,0	1/1:0,23:23:66.23:1053,66,0	0/0:33,0:33:96.32:0,96,1342	0/0:18,0:18:54.17:0,54,738	0/0:17,0:17:45.13:0,45,610	0/0:12,0:12:36.11:0,36,487	1/1:0,14:14:42.14:669,42,0	1/1:0,19:19:54.18:850,54,0	1/1:0,7:7:21.07:334,21,0
chr10	69162187	.	C	CTGT	10569.07	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-14.941;DP=655;FS=0.000;HRun=0;HaplotypeScore=87.2178;InbreedingCoeff=0.9950;MQ=85.42;MQ0=0;MQRankSum=-5.016;QD=55.05;ReadPosRankSum=-1.194;VQSLOD=6.4322;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:45:99:0,129,2016	0/0:10,0:10:30.09:0,30,466	0/0:32,0:32:81.21:0,81,1244	0/0:19,0:19:48.50:0,48,741	0/0:18,0:18:54.18:0,54,876	0/0:17,0:17:45.14:0,45,702	0/0:25,0:25:69.19:0,69,1055	1/1:7,24:32:81.15:1610,81,0	0/0:19,0:19:54.18:0,54,882	0/0:26,0:26:72.23:0,72,1134	0/0:20,0:20:57.19:0,57,931	0/0:29,0:29:72.23:0,72,1133	0/0:21,0:21:60.19:0,60,952	0/0:16,0:16:42.14:0,42,685	0/0:24,0:24:72.23:0,72,1152	0/0:23,0:23:63.21:0,63,1026	0/0:30,0:30:87.27:0,87,1379	1/1:2,11:13:12.34:649,12,0	1/1:3,20:23:65.87:1288,66,0	1/1:2,22:25:63.22:1403,63,0	1/1:0,29:29:72.25:1604,72,0	0/0:23,0:23:69.24:0,69,1115	0/0:27,0:27:81.28:0,81,1318	0/0:16,0:16:45.15:0,45,730	0/0:21,0:20:54.18:0,54,882	1/1:4,22:26:44.25:1407,44,0	1/1:4,26:29:81.28:1804,81,0	1/1:0,13:13:36.12:804,36,0
chr10	69162587	.	T	TC	7605.44	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=-0.475;DP=661;FS=9.647;HRun=1;HaplotypeScore=65.3665;InbreedingCoeff=0.9998;MQ=84.19;MQ0=0;MQRankSum=-2.670;QD=39.00;ReadPosRankSum=0.519;VQSLOD=4.9348;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:84.25:0,84,1072	0/0:11,0:11:30.10:0,30,389	0/0:29,0:28:69.12:0,69,822	0/0:22,0:22:60.09:0,60,716	0/0:30,0:30:81.21:0,81,995	0/0:24,0:24:69.22:0,69,896	0/0:27,0:27:78.24:0,78,998	1/1:1,28:29:86.74:1204,87,0	0/0:17,0:17:48.14:0,48,608	0/0:30,0:30:84.27:0,84,1080	0/0:17,0:17:48.15:0,48,610	0/0:22,0:22:66.19:0,66,828	0/0:22,0:22:66.21:0,66,857	0/0:21,0:21:63.18:0,63,790	0/0:25,0:25:69.19:0,69,857	0/0:18,0:18:54.16:0,54,687	0/0:32,0:31:93.26:0,93,1172	1/1:0,15:15:42.14:629,42,0	1/1:1,15:16:45.11:644,45,0	1/1:1,44:45:99:1800,123,0	1/1:1,17:18:36.12:539,36,0	0/0:23,0:23:69.22:0,69,895	0/0:29,0:29:81.21:0,81,1023	0/0:18,0:18:54.18:0,54,700	0/0:20,0:20:60.20:0,60,779	1/1:1,25:26:36.30:1038,36,0	1/1:2,34:36:87.29:1302,87,0	1/1:0,10:10:30.10:450,30,0
chr10	69163152	.	A	ATCCTGAGTGTCTG	33738.39	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-1.374;DP=628;FS=17.835;HRun=0;HaplotypeScore=222.7976;InbreedingCoeff=0.9935;MQ=72.31;MQ0=0;MQRankSum=-17.464;QD=127.31;ReadPosRankSum=-3.290;VQSLOD=2.9978;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,9:24:36.08:2148,36,0	0/0:12,0:12:36.11:0,36,1356	0/0:24,0:24:63.21:0,63,2083	0/0:24,0:24:66.18:0,66,2017	1/1:7,17:33:34.78:2267,35,0	0/0:30,0:30:90.28:0,90,3293	0/0:22,0:22:57.15:0,57,1955	1/1:17,0:17:47.82:2278,48,0	0/0:21,0:21:63.20:0,63,2295	1/1:5,17:32:92.57:5190,93,0	1/1:6,12:22:36.08:2171,36,0	0/0:24,0:24:69.22:0,69,2679	0/0:16,0:16:48.15:0,48,1837	0/0:26,0:26:72.21:0,72,2658	0/0:19,0:19:57.17:0,57,2069	0/0:22,0:22:66.16:0,66,2393	0/0:29,0:29:84.26:0,84,2804	1/1:6,0:6:12.03:347,12,0	1/1:13,4:16:45.14:2297,45,0	1/1:16,18:34:90.28:5294,90,0	1/1:7,1:8:15.51:815,16,0	0/0:27,0:27:78.27:0,78,3146	0/0:19,0:19:57.15:0,57,1930	0/0:25,0:25:63.22:0,63,2331	0/0:23,0:23:66.21:0,66,2450	1/1:15,12:28:78.26:4265,78,0	1/1:10,21:32:87.26:5033,87,0	1/1:10,2:12:30.06:1632,30,0
chr10	69163209	.	GT	G	4012.50	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=11.992;DP=649;FS=1.611;HRun=7;HaplotypeScore=89.9395;InbreedingCoeff=0.9995;MQ=70.38;MQ0=0;MQRankSum=-5.196;QD=25.72;ReadPosRankSum=0.728;VQSLOD=4.0301;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:66.17:0,66,808	0/0:15,0:15:42.12:0,42,514	0/0:21,0:21:44.22:0,44,587	0/0:16,0:15:33.09:0,33,386	0/0:35,0:35:69.21:0,69,855	0/0:23,0:23:54.17:0,54,668	0/0:26,0:26:69.68:0,70,856	1/1:1,24:25:72.14:727,72,0	0/0:30,0:30:87.26:0,87,1072	0/0:30,0:30:78.69:0,79,962	0/0:20,0:20:48.11:0,48,586	0/0:22,0:22:60.14:0,60,713	0/0:11,0:11:24.08:0,24,302	0/0:25,0:25:66.21:0,66,829	0/0:21,0:21:57.16:0,57,691	0/0:33,0:33:93.24:0,93,1148	0/0:33,0:33:90.29:0,90,1124	1/1:1,14:15:41.84:428,42,0	1/1:3,20:22:57.06:563,57,0	1/1:2,25:27:54.10:551,54,0	1/1:0,16:16:42.10:428,42,0	0/0:33,0:33:90.26:0,90,1105	0/0:23,0:23:66.21:0,66,830	0/0:24,0:24:66.07:0,66,776	0/0:22,0:22:66.21:0,66,830	1/1:1,19:20:57.13:581,57,0	1/1:6,11:17:33.07:336,33,0	1/1:0,13:13:39.09:398,39,0
chr10	69165627	.	TAC	T	233.08	PASS	AB=0.893;AC=11;AF=0.196;AN=56;BaseQRankSum=1.441;DP=451;FS=4.574;HRun=0;HaplotypeScore=88.1938;InbreedingCoeff=-0.1987;MQ=56.11;MQ0=15;MQRankSum=1.019;QD=1.44;ReadPosRankSum=1.748;VQSLOD=1.4858;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:27:12.71:0,13,83	0/1:8,0:9:30.02:30,0,143	0/0:32,0:8:3.01:0,3,40	0/0:33,0:10:0:0,0,0	0/0:16,0:16:6.91:0,7,85	0/1:14,3:17:43.76:44,0,251	0/1:14,1:15:6.82:7,0,337	0/0:23,0:23:12.92:0,13,153	0/0:9,0:9:21.06:0,21,298	0/0:18,0:16:24.06:0,24,206	0/0:16,0:16:8.99:0,9,87	0/1:11,1:12:6.83:7,0,334	0/1:16,0:16:3.36:3,0,288	0/0:7,0:7:11.71:0,12,147	0/1:9,4:13:99:103,0,288	0/1:10,3:13:71.67:72,0,291	0/1:20,3:24:71.66:72,0,289	0/0:5,0:5:3.47:0,3,10	0/0:14,0:14:14.90:0,15,136	0/0:15,0:17:10.76:0,11,65	0/0:27,0:27:5.84:0,6,50	0/0:7,0:7:18.06:0,18,266	0/1:13,1:14:6.83:7,0,335	0/1:18,2:19:3.82:4,0,375	0/1:8,1:9:15.87:16,0,190	0/0:15,0:19:22.57:0,23,195	0/0:9,0:9:5.59:0,6,113	0/0:8,0:8:1.55:0,2,4
chr10	69165709	.	T	TGG	717.65	PASS	AB=0.886;AC=14;AF=0.250;AN=56;BaseQRankSum=3.520;DP=407;FS=12.088;HRun=0;HaplotypeScore=87.6553;InbreedingCoeff=0.0342;MQ=43.52;MQ0=48;MQRankSum=-3.750;QD=4.10;ReadPosRankSum=3.042;VQSLOD=1.3977;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:11,2:9:24.37:57,0,24	0/0:6,0:6:18.06:0,18,251	0/0:20,0:2:6.01:0,6,62	0/0:14,0:3:5.94:0,6,21	0/1:13,2:14:61.16:140,0,61	0/0:16,0:15:42.11:0,42,527	0/0:12,0:11:30.06:0,30,366	0/1:24,2:24:40.42:40,0,245	0/0:10,0:7:18.06:0,18,226	1/1:17,2:16:26.73:201,27,0	1/1:7,1:7:8.08:56,8,0	0/0:14,0:14:39.48:0,39,482	0/0:8,0:7:21.07:0,21,292	0/0:16,0:16:42.04:0,42,512	0/0:9,0:7:21.05:0,21,246	0/0:15,0:14:33.11:0,33,451	0/0:32,0:28:68.44:0,68,882	0/1:6,0:5:2.92:3,0,39	0/1:13,1:12:66.86:77,0,67	0/1:15,1:14:45.21:45,0,109	0/1:6,1:5:10.58:47,0,11	0/0:11,0:10:24.03:0,24,299	0/0:11,0:9:18.06:0,18,246	0/0:15,0:14:21:0,21,285	0/0:23,0:22:57.18:0,57,728	0/1:17,0:16:84.43:97,0,84	0/1:12,2:12:26.95:52,0,27	0/1:13,0:11:47.65:62,0,48
chr10	69165710	.	T	TGGTTC	2308.97	PASS	AB=0.912;AC=14;AF=0.250;AN=56;BaseQRankSum=2.471;DP=407;FS=0.488;HRun=0;HaplotypeScore=106.6923;InbreedingCoeff=0.0053;MQ=43.45;MQ0=48;MQRankSum=-2.585;QD=13.12;ReadPosRankSum=-1.116;VQSLOD=2.4515;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:13,0:9:62.04:78,0,62	0/0:6,0:6:18.06:0,18,303	0/0:19,0:2:6.01:0,6,58	0/0:14,0:3:8.83:0,9,71	0/1:16,0:15:35.26:202,0,35	0/0:16,0:15:42.14:0,42,765	0/0:12,0:11:30.07:0,30,471	0/1:22,1:23:18.16:266,0,18	0/0:10,0:7:18.06:0,18,331	1/1:20,0:16:34.39:355,34,0	0/1:9,0:7:7.82:138,0,8	0/0:14,0:14:42.02:0,42,701	0/0:8,0:7:21.07:0,21,423	0/0:16,0:16:42.13:0,42,734	0/0:9,0:7:21.06:0,21,364	0/0:15,0:14:33.11:0,33,653	0/0:32,0:28:66.66:0,67,1233	0/1:7,0:5:19.05:145,0,19	0/1:10,1:11:99:160,0,104	0/1:13,2:13:34.45:235,0,34	0/1:8,0:5:9.75:53,0,10	0/0:11,0:10:24.08:0,24,449	0/0:11,0:9:18.06:0,18,334	0/0:15,0:14:20.87:0,21,376	0/0:23,0:22:57.20:0,57,1045	0/1:13,3:17:35.61:483,0,36	1/1:14,0:13:1.22:154,1,0	0/1:13,1:11:53.46:200,0,53
chr10	69165734	.	T	TTTTTTC	5164.41	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=10.025;DP=290;FS=0.000;HRun=0;HaplotypeScore=68.8069;InbreedingCoeff=0.8708;MQ=42.93;MQ0=35;MQRankSum=-10.039;QD=41.65;ReadPosRankSum=-0.354;VQSLOD=4.2559;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,3:7:17.53:345,18,0	0/0:4,0:4:6.01:0,6,95	0/0:13,0:3:3:0,3,25	0/0:8,0:1:2.98:0,3,21	1/1:4,4:8:18.06:542,18,0	0/0:12,0:11:30.09:0,30,569	0/0:11,0:10:26.61:0,27,510	1/1:2,8:10:27.05:783,27,0	0/0:10,0:8:15.03:0,15,299	1/1:9,5:8:17.96:319,18,0	1/1:7,3:8:23.78:298,24,0	0/0:9,0:9:18.03:0,18,311	0/0:14,0:13:34.29:0,34,632	0/0:11,0:11:22.81:0,23,462	0/0:6,0:5:12.04:0,12,258	0/0:10,0:9:10.88:0,11,367	0/0:20,0:16:32.66:0,33,683	1/1:6,2:6:11.96:294,12,0	1/1:5,4:10:18.01:455,18,0	1/1:7,5:11:23.91:443,24,0	1/1:3,1:2:2.95:109,3,0	0/0:11,0:10:18.03:0,18,354	0/0:5,0:4:9.02:0,9,164	0/0:12,0:11:24.01:0,24,371	0/0:10,0:9:21.07:0,21,480	1/1:7,5:8:24.03:577,24,0	1/1:9,8:16:38.92:784,39,0	1/1:2,1:4:8.99:217,9,0
chr10	69165804	.	AGCC	A	7185.12	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=16.122;DP=489;FS=4.153;HRun=0;HaplotypeScore=102.8466;InbreedingCoeff=0.9914;MQ=58.47;MQ0=5;MQRankSum=-13.323;QD=35.22;ReadPosRankSum=-4.012;VQSLOD=4.5289;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,26:30:48.08:750,48,0	0/0:5,0:5:12.04:0,12,272	0/0:13,0:6:18.06:0,18,408	0/0:16,0:8:18.89:0,19,426	1/1:1,16:17:39.95:618,40,0	0/0:18,0:18:54.19:0,54,1220	0/0:22,0:22:63.22:0,63,1400	1/1:1,22:22:51.14:772,51,0	0/0:20,0:20:57.20:0,57,1272	1/1:2,9:11:27.09:444,27,0	1/1:0,25:25:57.02:945,57,0	0/0:15,0:15:42.14:0,42,950	0/0:17,0:17:51.18:0,51,1155	0/0:20,0:20:60.21:0,60,1358	0/0:14,0:14:42.13:0,42,904	0/0:21,0:21:63.22:0,63,1426	0/0:30,0:30:81.28:0,81,1829	1/1:1,11:11:24.08:399,24,0	1/1:3,13:15:29.61:499,30,0	1/1:1,15:16:42.14:694,42,0	1/1:1,10:11:18.06:285,18,0	0/0:16,0:16:48.13:0,48,1040	0/0:14,0:14:42.14:0,42,920	0/0:28,0:28:81.28:0,81,1834	0/0:16,0:16:45.15:0,45,1010	1/1:2,17:18:54.11:830,54,0	1/1:2,13:15:36.12:598,36,0	1/1:0,8:8:21.07:349,21,0
chr10	69166884	.	G	GACCCACCCCA	34727.73	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-4.499;DP=670;FS=13.986;HRun=0;HaplotypeScore=184.4916;InbreedingCoeff=0.9972;MQ=78.00;MQ0=1;MQRankSum=-19.358;QD=119.75;ReadPosRankSum=-3.219;VQSLOD=4.0431;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:17,19:36:99:4554,105,0	0/0:20,0:20:60.21:0,60,1949	0/0:22,0:21:51.38:0,51,1430	0/0:20,0:20:52.43:0,52,1740	1/1:6,12:20:48.12:2299,48,0	0/0:29,0:29:82.07:0,82,2761	0/0:27,0:27:72.23:0,72,2314	1/1:20,13:36:99:4676,105,0	0/0:23,0:23:69.24:0,69,2264	1/1:11,15:30:84.29:4001,84,0	1/1:7,7:17:36.08:1713,36,0	0/0:21,0:21:60.18:0,60,1780	0/0:22,0:22:60.19:0,60,1839	0/0:16,0:16:45.15:0,45,1478	0/0:29,0:28:75.26:0,75,2497	0/0:26,0:26:78.27:0,78,2618	0/0:36,0:36:99:0,108,3427	1/1:8,13:24:48.16:2549,48,0	1/1:10,11:21:51.18:2385,51,0	1/1:3,6:9:21.07:986,21,0	1/1:11,10:26:48.16:2411,48,0	0/0:23,0:23:69.24:0,69,2291	0/0:14,0:14:42.14:0,42,1399	0/0:37,0:37:99:0,105,3205	0/0:15,0:15:45.15:0,45,1528	1/1:9,19:33:99:4268,99,0	1/1:9,21:32:87.30:4206,87,0	1/1:2,3:5:15.05:681,15,0
chr10	69167274	.	CTCCCTG	C	2141.55	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=7.592;DP=297;FS=5.690;HRun=0;HaplotypeScore=59.7740;InbreedingCoeff=0.8564;MQ=82.46;MQ0=0;MQRankSum=-4.865;QD=17.41;ReadPosRankSum=-3.828;VQSLOD=0.7313;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,12:13:3.01:77,3,0	0/0:6,0:6:18.06:0,18,537	0/0:13,0:13:5.15:0,5,919	0/0:13,0:12:27.85:0,28,652	1/1:0,4:5:5.95:71,6,0	0/0:9,0:9:24.08:0,24,781	0/0:8,0:8:24.07:0,24,669	1/1:0,8:8:17.86:168,18,0	0/0:12,0:12:33.08:0,33,901	1/1:8,3:11:32.93:424,33,0	1/1:0,6:6:3.48:71,3,0	0/0:16,0:16:48.15:0,48,1510	0/0:12,0:12:30.09:0,30,1010	0/0:10,0:10:30.10:0,30,920	0/0:9,0:9:27.09:0,27,816	0/0:4,0:4:12.04:0,12,390	0/0:16,0:16:35.59:0,36,977	1/1:0,11:11:21.07:447,21,0	1/1:5,3:8:20.97:314,21,0	1/1:3,1:4:5.99:48,6,0	1/1:0,24:24:6.91:81,7,0	0/0:13,0:13:39.11:0,39,1193	0/0:10,0:10:30.09:0,30,942	0/0:9,0:9:24.07:0,24,806	0/0:13,0:13:39.11:0,39,1108	1/1:0,8:8:17.85:234,18,0	1/1:2,15:18:18.95:394,19,0	1/1:7,0:7:2.98:21,3,0
chr10	69167278	.	CTG	C	920.34	PASS	AB=1.000;AC=21;AF=0.389;AN=54;BaseQRankSum=9.167;DP=293;FS=8.501;HRun=0;HaplotypeScore=44.8197;InbreedingCoeff=0.8258;MQ=83.61;MQ0=0;MQRankSum=-5.884;QD=8.14;ReadPosRankSum=-1.742;VQSLOD=1.3737;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,1:13:2.98:22,3,0	0/0:7,0:7:21.04:0,21,346	0/0:15,0:14:38.77:0,39,637	0/0:13,0:12:32.89:0,33,480	1/1:5,0:5:3.01:33,3,0	0/0:10,0:10:24.08:0,24,446	0/0:9,0:9:27.09:0,27,482	1/1:8,0:8:3.01:39,3,0	0/0:11,0:11:30.10:0,30,550	1/1:4,7:11:26.96:299,27,0	1/1:6,0:6:3:27,3,0	0/0:15,0:15:45.15:0,45,843	0/0:12,0:12:33.11:0,33,599	0/0:10,0:10:30.09:0,30,537	0/0:9,0:9:27.08:0,27,443	0/0:5,0:5:15.05:0,15,276	0/0:13,0:13:30.09:0,30,539	1/1:11,1:12:23.92:235,24,0	1/1:5,0:5:8.97:79,9,0	0/1:3,0:3:0:0,0,0	1/1:24,0:24:4.28:21,4,0	0/0:14,0:14:42.14:0,42,771	0/0:11,0:11:33.10:0,33,584	0/0:9,0:9:27.09:0,27,496	0/0:12,0:12:36.12:0,36,676	1/1:8,0:8:15.04:168,15,0	1/1:16,2:18:18.48:183,18,0	./.
chr10	69167285	.	C	CA	2215.91	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=9.323;DP=316;FS=58.500;HRun=2;HaplotypeScore=60.9023;InbreedingCoeff=0.9419;MQ=81.66;MQ0=0;MQRankSum=-5.968;QD=15.72;ReadPosRankSum=-8.555;VQSLOD=-0.3275;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:15,1:16:29.81:236,30,0	0/0:5,0:5:12.04:0,12,148	0/0:16,0:16:41.59:0,42,454	0/0:12,0:11:7.07:0,7,270	1/1:8,0:8:16.18:123,16,0	0/0:11,0:11:24.06:0,24,275	0/0:9,0:9:21.07:0,21,260	1/1:9,2:11:26.89:219,27,0	0/0:13,0:13:39.03:0,39,439	1/1:12,2:14:40.77:368,41,0	1/1:3,1:4:2.84:14,3,0	0/0:15,0:15:39.11:0,39,470	0/0:10,0:10:27.08:0,27,334	0/0:10,0:10:27.08:0,27,334	0/0:8,0:8:21.05:0,21,247	0/0:4,0:4:12.03:0,12,137	0/0:13,0:13:30.06:0,30,344	1/1:8,7:15:38.88:334,39,0	1/1:3,11:14:38.84:314,39,0	1/1:8,0:8:11.94:93,12,0	1/1:14,4:18:15.46:131,15,0	0/0:14,0:14:42.13:0,42,519	0/0:10,0:10:27.08:0,27,334	0/0:11,0:11:27.07:0,27,322	0/0:13,0:13:36.11:0,36,446	1/1:8,1:9:23.90:220,24,0	1/1:13,5:18:36.07:265,36,0	1/1:6,0:6:14.95:122,15,0
chr10	69168605	.	A	AG	8741.68	PASS	AB=0.560;AC=23;AF=0.411;AN=56;BaseQRankSum=18.473;DP=593;FS=0.687;HRun=5;HaplotypeScore=110.6614;InbreedingCoeff=0.9246;MQ=60.01;MQ0=2;MQRankSum=-4.338;QD=31.56;ReadPosRankSum=-1.300;VQSLOD=3.6832;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,31:39:90.16:1126,90,0	0/0:9,0:9:27.07:0,27,290	0/0:13,0:13:35.55:0,36,350	0/0:11,0:9:17.89:0,18,174	1/1:0,23:23:60.04:729,60,0	0/0:26,0:26:63.14:0,63,663	0/0:25,0:25:63.16:0,63,677	1/1:2,20:22:60.15:747,60,0	0/0:23,0:23:45.58:0,46,485	1/1:5,23:28:78.21:992,78,0	1/1:0,13:13:30.10:388,30,0	0/0:26,0:26:75.18:0,75,799	0/0:20,0:20:54.08:0,54,559	0/0:15,0:15:39.10:0,39,419	0/0:19,0:19:57.11:0,57,596	0/0:19,0:19:51.13:0,51,548	0/0:25,0:25:72.18:0,72,773	1/1:3,20:23:54.17:695,54,0	1/1:3,7:8:24.08:310,24,0	1/1:3,19:22:60.18:764,60,0	1/1:5,15:20:42.10:535,42,0	0/0:23,0:23:63.16:0,63,677	0/0:20,0:20:60.15:0,60,643	0/0:20,0:20:60.15:0,60,645	0/0:22,0:22:60.13:0,60,632	1/1:3,27:30:87.19:1090,87,0	1/1:4,29:33:87.13:1084,87,0	0/1:3,11:14:32.10:282,0,32
chr10	69168721	.	ATCTT	A	2990.65	PASS	AB=1.000;AC=35;AF=0.648;AN=54;BaseQRankSum=6.624;DP=459;FS=7.141;HRun=0;HaplotypeScore=134.0701;InbreedingCoeff=0.3368;MQ=50.12;MQ0=29;MQRankSum=0.490;QD=8.59;ReadPosRankSum=-1.126;VQSLOD=2.3914;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:19:9.99:197,10,0	0/0:12,0:12:32.73:0,33,282	0/0:2,0:1:3.01:0,3,32	./.	1/1:27,0:23:32.93:265,33,0	0/1:16,0:16:38.14:38,0,175	0/0:24,0:19:19.33:0,19,219	1/1:9,0:6:11.84:78,12,0	0/1:19,0:18:73.81:74,0,198	1/1:16,0:14:35.82:291,36,0	1/1:7,0:6:2.92:17,3,0	0/1:19,0:19:99:140,0,121	0/1:14,0:14:92.92:93,0,107	1/1:16,0:15:31.48:260,31,0	0/0:17,0:17:38.94:0,39,320	0/1:20,0:19:7.71:8,0,294	0/1:27,0:25:61.40:61,0,312	1/1:31,0:30:78.01:591,78,0	1/1:8,0:7:17.95:152,18,0	1/1:1,13:13:8.84:55,9,0	1/1:8,0:8:2.64:24,3,0	0/1:20,0:18:16.07:16,0,215	0/0:6,18:24:10.85:0,11,53	1/1:18,0:17:9.83:157,10,0	0/0:32,0:31:84.03:0,84,765	1/1:15,0:15:41.80:339,42,0	1/1:11,0:10:23.25:168,23,0	1/1:14,0:11:23.63:153,24,0
chr10	69170045	.	A	AG	7285.13	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=7.842;DP=548;FS=24.465;HRun=3;HaplotypeScore=123.5174;InbreedingCoeff=0.9775;MQ=88.84;MQ0=1;MQRankSum=-15.264;QD=32.24;ReadPosRankSum=-0.121;VQSLOD=2.7083;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,26:26:32.40:742,32,0	0/0:16,0:16:45.14:0,45,540	0/0:23,0:22:63.17:0,63,729	0/0:27,0:28:64.94:0,65,723	1/1:2,17:19:30.26:510,30,0	0/0:25,0:25:63.18:0,63,744	0/0:23,0:23:66.20:0,66,792	1/1:0,31:31:90.30:1258,90,0	0/0:24,0:24:69.15:0,69,798	1/1:3,16:19:51.17:711,51,0	1/1:3,10:13:11.90:281,12,0	0/0:24,0:24:63.19:0,63,756	0/0:27,0:27:75.19:0,75,873	0/0:17,0:17:51.16:0,51,612	0/0:23,0:23:69.21:0,69,828	0/0:16,0:16:48.13:0,48,565	0/0:21,0:21:63.17:0,63,743	1/1:1,15:16:36.12:493,36,0	1/1:0,14:14:42.14:588,42,0	1/1:0,25:25:51.62:804,52,0	1/1:0,15:15:5.14:154,5,0	0/0:13,0:13:39.12:0,39,468	0/0:11,0:11:27.08:0,27,322	0/0:18,0:18:54.17:0,54,648	0/0:13,0:13:36.11:0,36,432	1/1:3,18:21:57.19:792,57,0	1/1:2,17:19:39:659,39,0	1/1:0,8:8:21.07:294,21,0
chr10	69170059	.	A	ACTTGCAGGAGTCGGTTCTC	51551.94	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=8.143;DP=596;FS=18.253;HRun=0;HaplotypeScore=306.9201;InbreedingCoeff=0.9997;MQ=86.17;MQ0=1;MQRankSum=-18.621;QD=178.38;ReadPosRankSum=-2.885;VQSLOD=3.1744;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:26,10:36:84.22:6274,84,0	0/0:13,0:13:39.13:0,39,2065	0/0:22,0:21:51.16:0,51,1923	0/0:31,0:31:84.28:0,84,3566	1/1:19,4:23:51.16:3084,51,0	0/0:21,0:21:63.22:0,63,3233	0/0:23,0:23:66.23:0,66,3084	1/1:45,0:45:99:7468,129,0	0/0:23,0:23:63.22:0,63,3169	1/1:20,6:25:69.24:5345,69,0	1/1:15,3:18:33.11:2388,33,0	0/0:23,0:23:66.23:0,66,3403	0/0:22,0:22:54.19:0,54,2829	0/0:13,0:13:36.12:0,36,1766	0/0:26,0:26:75.26:0,75,3949	0/0:17,0:17:45.15:0,45,2032	0/0:20,0:20:57.18:0,57,2812	1/1:14,3:17:42.14:3230,42,0	1/1:10,4:14:39.13:2935,39,0	1/1:19,12:31:87.26:5925,87,0	1/1:14,5:19:36.12:2659,36,0	0/0:12,0:12:36.12:0,36,1850	0/0:9,0:9:27.09:0,27,1406	0/0:20,0:20:57.18:0,57,2731	0/0:12,0:12:36.12:0,36,1895	1/1:18,6:24:63.20:4622,63,0	1/1:19,6:25:72.24:5165,72,0	1/1:8,2:10:30.10:2455,30,0
chr10	69170505	.	TGA	T	384.11	PASS	AB=0.827;AC=22;AF=0.733;AN=30;BaseQRankSum=4.584;DP=475;FS=8.009;HRun=0;HaplotypeScore=57.2772;InbreedingCoeff=0.3946;MQ=73.69;MQ0=10;MQRankSum=-0.197;QD=1.74;ReadPosRankSum=0.775;VQSLOD=-0.1209;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	./.	./.	./.	1/1:10,0:12:5.72:29,6,0	0/0:24,0:24:21.06:0,21,274	./.	0/0:21,0:20:0.89:0,1,2	0/0:22,0:22:12.04:0,12,165	1/1:13,0:16:3.31:15,3,0	./.	1/1:12,6:18:6.02:64,6,0	1/1:19,1:20:8.69:60,9,0	1/1:24,0:24:9:89,9,0	1/1:17,8:25:9.02:96,9,0	1/1:7,2:8:3.01:32,3,0	1/1:11,7:19:3.01:32,3,0	1/1:14,0:18:5.68:28,6,0	./.	./.	./.	0/1:4,2:6:0:0,0,0	./.	0/1:25,1:27:21.94:22,0,219	./.	1/1:21,0:23:5.68:28,6,0	./.	./.
chr10	69172292	.	AT	A	154.38	PASS	AB=0.889;AC=11;AF=0.688;AN=16;BaseQRankSum=0.529;DP=35;FS=9.756;HRun=1;HaplotypeScore=19.8038;MQ=89.71;MQ0=0;MQRankSum=0.144;QD=8.58;ReadPosRankSum=-1.107;VQSLOD=-0.3855;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,2:3:6.02:82,6,0	./.	0/0:14,2:5:7.74:0,8,133	0/1:7,1:4:7.99:8,0,77	./.	./.	0/0:1,0:1:3.01:0,3,48	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	./.	1/1:0,1:1:3.01:42,3,0	1/1:2,2:4:6.01:67,6,0	./.	./.	./.	./.	1/1:1,0:1:2.97:20,3,0	./.	1/1:1,0:1:2.99:24,3,0
chr10	69172574	.	AC	A	4841.73	PASS	AB=0.855;AC=52;AF=0.929;AN=56;BaseQRankSum=3.764;DP=552;FS=0.744;HRun=2;HaplotypeScore=145.0530;InbreedingCoeff=0.2310;MQ=74.55;MQ0=0;MQRankSum=-1.932;QD=8.80;ReadPosRankSum=6.915;VQSLOD=2.3256;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:39,0:39:82.33:375,82,0	0/0:2,0:2:1.46:0,1,11	0/1:18,2:20:33.16:83,0,33	0/1:9,3:12:25.83:53,0,26	1/1:22,0:22:27.97:233,28,0	1/1:16,0:16:24.75:147,25,0	1/1:25,0:25:50.12:185,50,0	1/1:31,0:31:42.84:226,43,0	1/1:12,0:12:15.78:97,16,0	1/1:30,0:30:43.18:211,43,0	1/1:11,0:11:30.41:153,30,0	1/1:11,0:11:8.43:59,8,0	1/1:16,0:16:42.31:211,42,0	1/1:17,0:17:39.09:162,39,0	1/1:33,0:33:38.15:273,38,0	1/1:31,0:31:55.26:305,55,0	1/1:33,0:33:56.97:247,57,0	1/1:27,0:27:57.93:240,58,0	1/1:26,0:26:12.19:181,12,0	1/1:16,0:16:41.54:198,42,0	1/1:15,0:15:36.89:139,37,0	1/1:14,0:14:38.45:172,38,0	1/1:11,0:11:26.39:122,26,0	1/1:30,0:30:68.46:280,68,0	1/1:11,0:11:26.73:111,27,0	1/1:21,0:21:38.64:201,39,0	1/1:18,0:18:32.04:167,32,0	1/1:2,0:2:2.74:12,3,0
chr10	69174350	.	AAC	A	1316.61	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=3.849;DP=1031;FS=6.897;HRun=0;HaplotypeScore=183.6373;InbreedingCoeff=0.6679;MQ=56.11;MQ0=16;MQRankSum=5.911;QD=11.65;ReadPosRankSum=3.105;VQSLOD=2.7651;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:44:2.19:0,2,79	0/0:13,0:13:33.09:0,33,484	0/0:53,0:21:33.51:0,34,419	0/0:54,0:22:20.29:0,20,231	0/0:18,0:18:8.83:0,9,66	0/0:39,0:39:71.74:0,72,1428	0/0:41,0:41:85.13:0,85,1283	0/0:39,0:39:50.44:0,50,384	0/0:43,0:43:99:0,105,1620	0/0:30,0:29:55.28:0,55,467	0/0:16,0:16:10.46:0,10,55	0/0:49,0:49:99:0,114,1669	0/0:51,4:56:63.42:0,63,1913	0/0:30,2:32:24.18:0,24,827	0/0:53,1:54:93.37:0,93,1893	0/0:40,0:40:63.44:0,63,1452	0/0:36,1:38:48.31:0,48,1231	0/0:20,0:19:23.25:0,23,179	0/0:29,0:27:47.03:0,47,335	0/0:33,0:31:50.87:0,51,335	0/0:42,0:40:13.32:0,13,114	0/0:43,0:43:60.43:0,60,1399	1/1:8,17:25:38.77:450,39,0	1/1:15,41:59:87.99:980,88,0	0/1:29,0:29:15:15,0,707	0/0:44,0:44:62.49:0,62,502	0/0:35,0:35:32.95:0,33,257	0/0:7,0:6:9.96:0,10,45
chr10	69174366	.	C	CACACACAG	13844.20	PASS	AB=0.704;AC=22;AF=0.393;AN=56;BaseQRankSum=2.506;DP=1095;FS=2.130;HRun=0;HaplotypeScore=265.1990;InbreedingCoeff=0.8584;MQ=55.78;MQ0=17;MQRankSum=-9.345;QD=33.52;ReadPosRankSum=-5.390;VQSLOD=3.5571;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:16,1:52:14.28:689,14,0	0/0:12,0:12:33.10:0,33,821	0/0:64,0:25:29.64:0,30,886	0/0:54,0:20:49.87:0,50,578	1/1:4,1:25:12.04:192,12,0	0/0:36,0:36:99:0,101,2522	0/0:43,0:43:99:0,105,2308	1/1:7,0:49:99:1659,114,0	0/0:47,0:47:99:0,132,2970	1/1:7,23:37:82.03:2017,82,0	1/1:2,13:16:14.97:398,15,0	0/0:52,0:52:99:0,117,2896	0/0:52,0:52:99:0,144,3369	0/0:32,0:32:75.15:0,75,1623	0/0:57,0:57:99:0,156,3507	0/0:39,0:39:99:0,111,2555	0/0:40,0:40:99:0,114,2414	0/1:18,4:21:4.47:764,0,4	1/1:8,18:31:80.87:1936,81,0	1/1:3,31:43:54.18:1682,54,0	0/1:11,32:48:33.66:281,0,34	0/0:48,0:48:99:0,120,2672	0/0:24,0:24:54.10:0,54,876	0/0:61,0:61:99:0,111,1953	0/0:21,0:21:37.90:0,38,1238	1/1:2,29:38:84.04:2467,84,0	1/1:3,25:33:36.04:1366,36,0	1/1:7,0:6:15.02:394,15,0
chr10	69174621	.	TACACACACATACACAACAC	T	9061.38	PASS	AB=0.626;AC=23;AF=0.411;AN=56;BaseQRankSum=14.595;DP=1056;FS=5.039;HRun=0;HaplotypeScore=439.2706;InbreedingCoeff=0.8729;MQ=53.33;MQ0=27;MQRankSum=-10.692;QD=22.10;ReadPosRankSum=-3.765;VQSLOD=1.1731;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:19,24:44:17.16:337,17,0	0/0:12,0:12:24.08:0,24,1893	0/0:56,0:28:39.13:0,39,1491	0/0:42,0:17:24.08:0,24,859	1/1:9,13:21:3.01:94,3,0	0/0:41,0:41:99:0,100,7487	0/0:30,0:30:69.15:0,69,4413	1/1:27,0:25:51.16:674,51,0	0/0:35,0:35:90.29:0,90,6775	1/1:16,24:35:54.42:1903,54,0	1/1:4,20:23:20.77:569,21,0	0/0:46,0:46:99:0,123,8432	0/0:43,0:43:99:0,117,8364	0/0:45,0:45:99:0,105,7324	0/0:64,0:64:99:0,160,10452	0/0:47,0:47:99:0,114,7474	0/0:35,0:35:78.26:0,78,5172	1/1:14,21:33:0.26:476,0,0	1/1:18,1:14:21.05:369,21,0	1/1:10,34:43:36.12:1096,36,0	0/1:31,46:71:2.58:69,0,3	0/0:41,0:41:90.29:0,90,6127	0/0:24,0:24:51.17:0,51,3697	0/0:47,0:46:99:0,104,7112	0/0:38,0:38:86.10:0,86,6257	1/1:10,27:36:56.78:1881,57,0	1/1:7,26:31:39.13:1284,39,0	1/1:4,4:4:6.02:311,6,0
chr10	69174635	.	CA	C	3841.13	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=15.820;DP=969;FS=3.257;HRun=2;HaplotypeScore=150.3483;InbreedingCoeff=0.9172;MQ=53.68;MQ0=26;MQRankSum=-11.436;QD=11.50;ReadPosRankSum=-3.817;VQSLOD=0.8733;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:31,1:32:16.70:193,17,0	0/0:11,0:11:30.10:0,30,440	0/0:54,0:24:60.14:0,60,792	0/0:43,1:15:39.12:0,39,548	1/1:15,0:14:3.01:39,3,0	0/0:37,0:37:99:0,104,1508	0/0:30,0:30:87.28:0,87,1255	1/1:2,27:27:81.26:1024,81,0	0/0:35,0:35:99:0,105,1536	1/1:29,2:26:50.17:462,50,0	1/1:22,0:21:21.07:272,21,0	0/0:48,0:47:99:0,133,1895	0/0:48,0:48:99:0,141,2019	0/0:44,0:44:99:0,129,1817	0/0:61,0:61:99:0,173,2420	0/0:47,0:47:99:0,137,1979	0/0:32,1:33:48.82:0,49,1174	1/1:23,4:25:21.50:141,21,0	1/1:13,8:13:12.17:318,12,0	1/1:34,0:33:35.48:432,35,0	1/1:50,6:50:0.95:35,1,0	0/0:33,0:33:97.56:0,98,1402	0/0:24,1:25:69.23:0,69,1009	0/0:44,0:43:99:0,112,1579	0/0:39,0:39:99:0,106,1518	1/1:30,0:28:52.67:493,53,0	1/1:28,0:26:37.21:414,37,0	1/1:4,4:4:4.74:17,5,0
chr10	69174636	.	AAC	A	142.54	PASS	AB=1.000;AC=8;AF=0.143;AN=56;BaseQRankSum=9.200;DP=960;FS=0.691;HRun=0;HaplotypeScore=173.2743;InbreedingCoeff=0.4344;MQ=53.75;MQ0=26;MQRankSum=-6.939;QD=1.00;ReadPosRankSum=4.311;VQSLOD=2.4934;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:31:9.08:0,9,32	0/0:11,0:11:30.10:0,30,480	0/0:55,0:23:45.10:0,45,640	0/0:44,0:15:31.33:0,31,476	0/0:14,0:13:2.50:0,2,9	0/0:36,1:37:61.14:0,61,1561	0/0:30,0:30:78.25:0,78,1241	0/0:30,0:28:27.68:0,28,118	0/0:35,0:35:96.33:0,96,1582	0/1:30,0:25:26.04:72,0,26	0/0:20,0:20:17.47:0,17,62	0/0:50,0:49:94.57:0,95,1856	0/0:47,0:47:99:0,123,2030	0/0:43,0:43:99:0,108,1778	0/0:58,2:60:99:0,106,2254	0/0:47,1:48:82.17:0,82,1847	0/0:33,0:33:79.25:0,79,1197	1/1:26,0:25:8:70,8,0	0/1:21,0:13:1.19:1,0,23	0/0:34,0:33:13.86:0,14,74	0/0:54,0:48:2.06:0,2,8	0/0:33,0:33:80.12:0,80,1317	0/0:25,0:25:57.19:0,57,943	0/0:43,0:42:96.46:0,96,1552	0/0:38,0:38:95.77:0,96,1554	0/1:28,0:27:0.58:89,0,1	0/1:27,0:26:8.24:8,0,54	1/1:8,0:4:5.68:28,6,0
chr10	69176488	.	AGCACCAGGG	A	9729.01	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=14.433;DP=423;FS=1.764;HRun=0;HaplotypeScore=117.9595;InbreedingCoeff=0.9208;MQ=69.55;MQ0=0;MQRankSum=-12.876;QD=64.86;ReadPosRankSum=-3.413;VQSLOD=3.9633;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,30:30:60.21:1905,60,0	0/0:5,0:5:15.05:0,15,672	0/0:6,0:6:0.12:0,0,274	0/0:8,0:8:14.91:0,15,140	1/1:0,7:7:9.03:292,9,0	0/0:20,0:20:60.18:0,60,2584	0/0:21,0:21:63.22:0,63,2908	1/1:0,15:16:45.13:1265,45,0	0/0:25,0:25:75.23:0,75,3378	1/1:0,17:17:42.08:1214,42,0	1/1:0,7:7:18.06:582,18,0	0/0:17,0:17:51.18:0,51,2573	0/0:25,0:25:75.23:0,75,3343	0/0:17,0:17:51.15:0,51,2239	0/0:25,0:25:75.22:0,75,3120	0/0:11,0:11:33.09:0,33,1407	0/0:31,0:31:93.28:0,93,4206	1/1:0,8:8:15.05:488,15,0	1/1:1,5:6:17.98:359,18,0	1/1:0,19:19:36.12:1165,36,0	1/1:0,13:13:18.06:584,18,0	0/0:17,0:17:51.18:0,51,2429	0/0:15,0:15:45.14:0,45,2069	0/0:21,0:21:63.20:0,63,2959	0/0:9,0:9:27.09:0,27,1366	1/1:1,14:15:45.03:1096,45,0	1/1:0,10:10:20.94:682,21,0	1/1:0,2:2:3.01:97,3,0
chr10	69176595	.	T	TTGTTTGGCA	7114.15	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=0.042;DP=189;FS=11.507;HRun=0;HaplotypeScore=61.2110;InbreedingCoeff=0.8457;MQ=92.49;MQ0=0;MQRankSum=-9.046;QD=82.72;ReadPosRankSum=-2.975;VQSLOD=2.7180;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,3:12:15.05:671,15,0	0/0:1,0:1:3.01:0,3,91	0/0:12,0:9:24.06:0,24,518	0/0:15,0:13:33.11:0,33,821	1/1:5,6:12:21.03:588,21,0	0/0:4,0:4:12.04:0,12,363	0/0:10,0:10:30.10:0,30,863	1/1:7,2:10:24.07:986,24,0	0/0:2,0:2:3.01:0,3,91	1/1:2,4:6:18.06:746,18,0	1/1:0,2:2:6.02:205,6,0	0/0:6,0:6:18.06:0,18,544	0/0:2,0:2:6.02:0,6,181	0/0:8,0:8:21.04:0,21,502	0/0:6,0:6:18.06:0,18,544	0/0:3,0:3:9.03:0,9,260	0/0:6,0:6:18.06:0,18,500	1/1:1,1:3:6.02:282,6,0	1/1:9,0:9:21.06:465,21,0	1/1:4,1:6:12.04:523,12,0	1/1:4,0:4:12.04:245,12,0	0/0:6,0:6:15.05:0,15,454	0/0:7,0:7:18.06:0,18,544	0/0:6,0:6:15.05:0,15,424	0/0:9,0:9:27.09:0,27,801	1/1:4,2:6:15.05:659,15,0	1/1:8,4:15:39.12:1599,39,0	1/1:0,1:1:3.01:144,3,0
chr10	69177330	.	AT	A	9398.11	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=16.866;DP=626;FS=0.949;HRun=2;HaplotypeScore=90.0571;InbreedingCoeff=0.9967;MQ=90.15;MQ0=0;MQRankSum=-3.832;QD=34.94;ReadPosRankSum=1.270;VQSLOD=5.0919;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,22:26:72.17:898,72,0	0/0:5,0:5:15.05:0,15,225	0/0:28,0:28:83.77:0,84,1024	0/0:22,0:22:50.16:0,50,706	1/1:0,28:28:74.75:921,75,0	0/0:22,0:22:63.19:0,63,902	0/0:23,0:23:69.23:0,69,1014	1/1:0,22:22:63.17:800,63,0	0/0:25,0:25:75.23:0,75,1066	1/1:0,27:27:75.22:947,75,0	1/1:2,23:25:69.20:865,69,0	0/0:25,0:25:75.24:0,75,1100	0/0:15,0:15:45.15:0,45,673	0/0:21,0:21:56:0,56,813	0/0:22,0:22:66.17:0,66,925	0/0:29,0:29:84.28:0,84,1257	0/0:35,0:35:99:0,105,1487	1/1:3,11:14:39.08:473,39,0	1/1:0,17:17:51.16:651,51,0	1/1:2,21:23:63.19:796,63,0	1/1:5,28:33:84.17:1043,84,0	0/0:14,0:14:42.14:0,42,629	0/0:23,0:23:69.23:0,69,1012	0/0:23,0:23:69.22:0,69,1015	0/0:25,0:25:69.23:0,69,1034	1/1:1,19:20:60.20:778,60,0	1/1:3,25:28:81.16:993,81,0	1/1:0,6:6:18.06:233,18,0
chr10	69177398	.	G	GAAC	13607.01	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=17.624;DP=611;FS=2.234;HRun=0;HaplotypeScore=125.7255;InbreedingCoeff=0.9970;MQ=79.54;MQ0=0;MQRankSum=-11.818;QD=51.35;ReadPosRankSum=-1.523;VQSLOD=6.3233;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,34:38:90.29:1882,90,0	0/0:7,0:7:21.07:0,21,343	0/0:22,0:22:60.20:0,60,972	0/0:14,0:14:36.12:0,36,549	1/1:5,15:20:48.16:960,48,0	0/0:21,0:21:63.22:0,63,1029	0/0:23,0:23:63.21:0,63,1009	1/1:10,18:28:63.22:1387,63,0	0/0:24,0:24:72.23:0,72,1152	1/1:4,17:21:51.17:1102,51,0	1/1:4,12:16:36.12:790,36,0	0/0:27,0:27:78.27:0,78,1271	0/0:20,0:20:57.19:0,57,927	0/0:25,0:25:66.22:0,66,1069	0/0:18,0:18:51.15:0,51,807	0/0:27,0:27:78.24:0,78,1225	0/0:37,0:37:99:0,99,1568	1/1:5,12:17:33.11:728,33,0	1/1:6,8:15:33.07:619,33,0	1/1:5,16:21:57.20:1215,57,0	1/1:6,30:36:99:1995,99,0	0/0:11,0:11:27.09:0,27,425	0/0:12,0:12:36.12:0,36,588	0/0:38,0:38:99:0,108,1759	0/0:20,0:20:60.20:0,60,975	1/1:4,13:18:45.15:987,45,0	1/1:4,23:27:75.26:1642,75,0	1/1:4,3:8:15.05:300,15,0
chr10	69179162	.	CA	C	1053.51	PASS	AB=0.888;AC=10;AF=0.179;AN=56;BaseQRankSum=9.730;DP=478;FS=6.616;HRun=12;HaplotypeScore=53.7434;InbreedingCoeff=0.7652;MQ=71.74;MQ0=1;MQRankSum=-0.766;QD=8.57;ReadPosRankSum=2.237;VQSLOD=2.1845;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:6,0:22:28.51:83,29,0	0/0:8,0:9:20.87:0,21,191	0/0:18,0:10:11.69:0,12,81	0/0:11,0:11:9.40:0,9,72	1/1:3,2:29:49.45:177,49,0	0/0:17,0:17:48.08:0,48,481	0/0:12,0:12:24.05:0,24,243	0/0:27,2:29:45.90:0,46,647	0/0:11,0:11:24.02:0,24,236	1/1:4,17:21:50.77:391,51,0	1/1:2,25:27:71.69:555,72,0	0/0:7,0:7:21.02:0,21,202	0/0:11,0:11:33.06:0,33,330	0/0:10,0:10:21.02:0,21,206	0/0:19,1:20:18.84:0,19,366	0/0:14,2:16:12.83:0,13,306	0/0:21,0:21:54.07:0,54,528	0/0:28,0:28:72.09:0,72,709	0/1:12,2:14:10.42:10,0,261	0/0:19,0:19:45.09:0,45,457	0/0:5,0:5:9.02:0,9,91	0/1:8,1:9:2.19:2,0,162	0/0:15,0:15:39.05:0,39,381	0/0:18,0:18:45.07:0,45,449	0/0:19,0:19:36.38:0,36,444	0/0:21,1:22:36.88:0,37,555	0/0:21,0:24:51.10:0,51,517	0/0:12,0:13:35.91:0,36,349
chr10	69180061	.	GTGTGTGTCTGTGTA	G	2711.28	PASS	AB=0.553;AC=21;AF=0.389;AN=54;BaseQRankSum=5.719;DP=605;FS=4.459;HRun=0;HaplotypeScore=200.5002;InbreedingCoeff=0.8311;MQ=53.09;MQ0=24;MQRankSum=-4.400;QD=14.58;ReadPosRankSum=-0.130;VQSLOD=2.5415;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:22:42.03:551,42,0	0/0:10,0:10:21.07:0,21,981	0/0:26,0:9:18.81:0,19,338	0/0:33,0:6:16.66:0,17,148	./.	0/0:28,0:28:54.64:0,55,1729	0/0:23,0:23:54.19:0,54,1698	1/1:18,0:15:32.90:368,33,0	0/0:21,0:21:45.09:0,45,1898	1/1:0,20:20:43.06:537,43,0	1/1:4,18:21:1.39:31,1,0	0/0:33,0:33:75.13:0,75,2493	0/0:19,0:19:48.42:0,48,1573	0/0:19,0:19:48.09:0,48,1707	0/0:21,0:20:42.13:0,42,1714	0/0:37,0:37:99:0,101,3812	0/0:35,0:35:38.25:0,38,2994	1/1:10,1:10:29.98:328,30,0	1/1:7,0:4:6.01:69,6,0	1/1:3,11:14:3.01:123,3,0	1/1:25,0:22:14.87:124,15,0	0/0:22,0:22:54.15:0,54,2537	0/0:28,0:27:38.98:0,39,1177	0/0:25,0:25:53.88:0,54,1801	0/0:21,0:21:48.16:0,48,1866	0/1:5,21:26:16.33:390,0,16	1/1:12,0:10:12.04:168,12,0	1/1:6,0:6:12.04:223,12,0
chr10	69180067	.	GTCTGTGTA	G	2929.72	PASS	AC=22;AF=0.407;AN=54;BaseQRankSum=5.983;DP=590;FS=1.487;HRun=0;HaplotypeScore=144.7795;InbreedingCoeff=0.9248;MQ=52.90;MQ0=21;MQRankSum=-4.462;QD=15.92;ReadPosRankSum=-3.550;VQSLOD=1.9521;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:26:60.10:836,60,0	0/0:7,0:9:21.07:0,21,611	0/0:23,0:9:19.59:0,20,338	0/0:30,0:6:15.87:0,16,145	./.	0/0:24,0:24:53.83:0,54,1142	0/0:24,0:23:59.34:0,59,1177	1/1:5,12:14:35.86:387,36,0	0/0:18,0:18:45.09:0,45,1296	1/1:20,0:20:44.19:520,44,0	1/1:19,0:18:2.44:32,2,0	0/0:31,0:31:77.98:0,78,1782	0/0:17,0:17:48.28:0,48,1113	0/0:21,0:21:54.09:0,54,1297	0/0:21,0:20:48.15:0,48,1150	0/0:37,0:37:99:0,101,2587	0/0:36,0:36:52.33:0,52,1981	1/1:11,0:10:29.98:328,30,0	1/1:8,0:5:8.57:87,9,0	1/1:12,0:12:3.01:64,3,0	1/1:29,0:24:14.91:125,15,0	0/0:22,0:22:54.14:0,54,1506	0/0:26,0:25:38.98:0,39,844	0/0:30,0:29:55.57:0,56,1088	0/0:19,0:19:29.18:0,29,1122	1/1:23,0:23:20.11:350,20,0	1/1:11,0:9:15.05:206,15,0	1/1:5,0:5:15.05:205,15,0
chr10	69180075	.	A	ATG	495.45	PASS	AB=0.974;AC=21;AF=0.420;AN=50;BaseQRankSum=2.998;DP=601;FS=1.824;HRun=0;HaplotypeScore=106.9168;InbreedingCoeff=0.4117;MQ=51.39;MQ0=22;MQRankSum=-1.468;QD=1.71;ReadPosRankSum=-3.326;VQSLOD=1.1130;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:31,0:28:15.41:116,15,0	0/1:11,0:10:10.96:11,0,66	./.	./.	./.	0/1:23,0:25:26.33:26,0,147	0/0:22,0:25:29.74:0,30,277	1/1:19,0:15:4.73:23,5,0	0/0:20,0:19:20.71:0,21,181	0/1:20,0:20:4.52:15,0,5	0/1:20,0:18:0.07:0,0,0	0/0:29,0:29:35.53:0,36,322	0/0:20,0:19:17.70:0,18,150	0/0:20,0:20:21.04:0,21,219	0/0:20,0:20:20.85:0,21,208	0/1:34,0:35:0.82:1,0,325	0/0:32,0:34:56.77:0,57,555	1/1:11,0:10:3.84:21,4,0	1/1:10,0:7:3.22:13,3,0	0/0:13,0:13:2.80:0,3,13	0/1:27,0:22:0:0,0,0	0/0:23,0:23:42.08:0,42,436	1/1:16,10:25:9.03:129,9,0	0/1:25,7:31:99:256,0,131	0/0:22,0:23:37.22:0,37,331	0/0:22,0:22:5.34:0,5,23	1/1:14,0:12:4.36:21,4,0	1/1:6,0:6:3.81:18,4,0
chr10	69180214	.	TCAC	T	5052.40	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=12.555;DP=654;FS=27.263;HRun=0;HaplotypeScore=99.0434;InbreedingCoeff=0.9298;MQ=60.87;MQ0=6;MQRankSum=-0.801;QD=19.81;ReadPosRankSum=1.383;VQSLOD=2.9297;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,33:44:72.17:1025,72,0	0/0:10,0:10:24.07:0,24,408	0/0:31,0:22:0.09:0,0,231	0/0:27,0:20:20.28:0,20,204	1/1:6,10:16:11.78:171,12,0	0/0:17,0:17:27.50:0,27,401	0/0:26,0:26:60.11:0,60,955	1/1:8,11:17:16.94:286,17,0	0/0:37,0:36:81.19:0,81,1412	1/1:9,19:28:50.81:600,51,0	1/1:1,3:4:6.02:85,6,0	0/0:32,1:33:41.50:0,42,1421	0/0:21,1:22:17.43:0,17,1007	0/0:33,0:33:81.15:0,81,1487	0/0:29,0:29:69.18:0,69,1279	0/0:32,0:32:81.26:0,81,1601	0/0:28,0:28:52.64:0,53,1100	1/1:5,15:20:33.11:470,33,0	1/1:6,11:16:32.79:352,33,0	1/1:2,6:7:9.03:128,9,0	1/1:8,33:40:39.13:555,39,0	0/0:16,0:16:27.09:0,27,519	0/0:11,0:11:24.05:0,24,380	0/0:39,0:39:81.24:0,81,1514	0/0:7,0:7:15.04:0,15,269	1/1:7,20:27:51.11:654,51,0	1/1:5,11:16:27.09:384,27,0	1/1:6,8:14:24.08:342,24,0
chr10	69180519	.	GTCTA	G	46.93	PASS	AB=0.956;AC=8;AF=0.148;AN=54;BaseQRankSum=3.913;DP=250;FS=6.847;HRun=0;HaplotypeScore=61.6310;InbreedingCoeff=-0.0104;MQ=45.18;MQ0=3;MQRankSum=-4.391;QD=0.49;ReadPosRankSum=-1.608;VQSLOD=0.3136;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:19,0:18:12.03:12,0,199	0/0:1,0:1:3.01:0,3,50	0/0:15,0:9:26.99:0,27,276	0/0:19,0:10:26.95:0,27,251	0/0:5,0:5:8.99:0,9,75	0/0:8,0:8:24.02:0,24,331	0/0:9,0:9:27.01:0,27,301	0/1:21,0:19:74.48:74,0,175	0/0:5,0:5:12.01:0,12,148	0/0:9,0:9:23.87:0,24,202	1/1:3,0:3:1.82:5,2,0	0/0:5,0:5:13.27:0,13,155	0/0:8,0:8:17.94:0,18,191	0/0:5,0:5:15.01:0,15,175	0/0:10,0:10:30.05:0,30,430	0/0:3,0:3:9.01:0,9,102	0/0:12,0:12:36.01:0,36,415	0/0:13,0:13:14.45:0,14,154	0/1:7,4:10:39.43:39,0,93	0/0:6,0:6:1.93:0,2,6	0/1:11,0:10:5.43:5,0,59	0/0:7,0:7:17.99:0,18,175	0/0:3,0:2:5.99:0,6,50	0/0:2,0:2:6:0,6,72	0/0:9,0:9:21.01:0,21,270	0/1:22,0:22:20.97:21,0,390	0/1:8,0:8:5.05:5,0,120	./.
chr10	69180707	.	A	AGTGT	1666.97	PASS	AB=0.824;AC=25;AF=0.500;AN=50;BaseQRankSum=0.601;DP=437;FS=6.664;HRun=0;HaplotypeScore=87.1461;InbreedingCoeff=0.4984;MQ=48.71;MQ0=32;MQRankSum=-1.585;QD=6.51;ReadPosRankSum=-1.698;VQSLOD=0.5804;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:26:8.95:114,9,0	1/1:3,0:3:0.47:1,0,0	./.	./.	0/0:10,0:7:0.47:0,0,1	0/0:10,0:11:14.99:0,15,166	0/0:12,0:12:9.03:0,9,140	1/1:24,0:22:17.59:225,18,0	0/0:4,0:5:12.03:0,12,149	1/1:9,0:9:6:77,6,0	./.	0/0:11,0:11:14.84:0,15,200	0/0:11,0:11:15.05:0,15,233	0/0:6,0:6:9.03:0,9,133	0/0:13,0:13:12.03:0,12,168	0/0:6,0:6:12.04:0,12,187	0/1:17,0:17:87.36:87,0,235	0/1:14,6:24:41.94:346,0,42	1/1:17,0:13:8.77:151,9,0	1/1:6,1:7:3.01:71,3,0	1/1:28,11:43:6.02:141,6,0	0/0:9,0:9:6.01:0,6,67	1/1:10,0:10:3.01:71,3,0	0/1:25,0:35:57.15:57,0,104	0/0:12,0:12:3.01:0,3,47	1/1:10,5:15:8.99:118,9,0	1/1:7,3:10:11.44:165,11,0	1/1:5,3:8:9.92:214,10,0
chr10	69180863	.	A	ATT	3596.22	PASS	AB=1.000;AC=25;AF=0.446;AN=56;BaseQRankSum=9.446;DP=410;FS=1.544;HRun=2;HaplotypeScore=88.9748;InbreedingCoeff=0.9172;MQ=60.28;MQ0=1;MQRankSum=-5.209;QD=17.12;ReadPosRankSum=-0.959;VQSLOD=0.8073;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:19:50.78:410,51,0	0/0:5,0:5:15.05:0,15,221	0/1:13,0:8:2.76:3,0,198	0/0:15,0:10:24.03:0,24,305	1/1:18,0:16:38.43:338,38,0	0/0:13,0:13:30.07:0,30,394	0/0:10,0:10:30.10:0,30,441	1/1:30,0:29:62.67:525,63,0	0/0:16,0:16:48.12:0,48,645	1/1:16,0:16:44.19:345,44,0	1/1:1,8:9:11.89:111,12,0	0/0:11,0:11:33.06:0,33,422	0/0:14,0:14:39.13:0,39,574	0/0:14,0:14:36.12:0,36,529	0/0:21,0:21:60.20:0,60,875	0/0:13,0:13:33.11:0,33,484	0/0:13,0:13:32.97:0,33,377	1/1:23,0:22:53.02:447,53,0	1/1:20,0:19:29.92:284,30,0	1/1:13,0:12:26.92:225,27,0	1/1:7,0:6:8.51:82,9,0	0/0:9,0:9:27.08:0,27,378	0/0:14,0:14:42.14:0,42,616	0/0:20,0:20:51.17:0,51,749	0/0:12,0:12:36.11:0,36,501	1/1:17,0:15:41.85:345,42,0	1/1:22,0:21:56.25:469,56,0	1/1:3,0:3:4.44:14,4,0
chr10	69180884	.	ATG	A	324.64	PASS	AB=0.907;AC=17;AF=0.370;AN=46;BaseQRankSum=2.862;DP=431;FS=21.138;HRun=0;HaplotypeScore=97.1746;InbreedingCoeff=0.2593;MQ=52.79;MQ0=6;MQRankSum=0.527;QD=1.92;ReadPosRankSum=3.443;VQSLOD=0.2423;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:5.82:0,6,35	0/0:8,0:8:8.99:0,9,104	./.	./.	0/0:20,0:19:2.99:0,3,23	0/0:17,0:17:15.68:0,16,127	0/0:19,0:18:17.87:0,18,212	0/0:19,0:18:8.77:0,9,28	1/1:18,0:18:6.77:82,7,0	./.	1/1:7,0:7:2.60:10,3,0	0/1:10,1:11:20.21:20,0,119	0/0:15,0:15:12:0,12,134	./.	0/1:19,1:20:30.40:30,0,75	0/1:12,3:15:23.39:23,0,56	0/1:12,3:15:14.25:14,0,155	0/0:18,0:17:5.89:0,6,37	./.	0/0:13,0:12:2.94:0,3,18	0/0:15,0:12:5.97:0,6,45	0/0:13,0:13:5.97:0,6,109	1/1:15,0:15:2.99:23,3,0	1/1:30,1:34:31.66:205,32,0	1/1:12,0:12:5.67:29,6,0	0/0:14,0:10:0.47:0,0,1	0/1:18,0:16:5.24:5,0,21	1/1:3,0:3:5.68:28,6,0
chr10	69182119	.	TG	T	6968.44	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=18.450;DP=688;FS=0.302;HRun=8;HaplotypeScore=119.3295;InbreedingCoeff=0.9988;MQ=85.08;MQ0=0;MQRankSum=-3.386;QD=23.54;ReadPosRankSum=2.543;VQSLOD=4.0258;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,40:43:99:1110,117,0	0/0:7,0:7:21.06:0,21,254	0/0:27,0:28:38.85:0,39,540	0/0:25,0:25:52.51:0,53,617	1/1:5,21:26:63.05:599,63,0	0/0:19,0:20:47.68:0,48,579	0/0:39,0:39:99:0,105,1231	1/1:9,22:31:63.02:603,63,0	0/0:29,0:29:75.18:0,75,859	1/1:5,23:28:63.02:592,63,0	1/1:0,16:16:36.01:338,36,0	0/0:22,0:22:60.16:0,60,700	0/0:36,0:36:93.12:0,93,1021	0/0:7,0:7:21.04:0,21,230	0/0:29,0:29:72.18:0,72,826	0/0:18,0:18:51.16:0,51,616	0/0:39,0:39:99:0,111,1316	1/1:2,17:19:45.07:434,45,0	1/1:2,17:19:51.08:492,51,0	1/1:2,17:19:51.06:492,51,0	1/1:3,35:38:96.14:926,96,0	0/0:22,0:22:54.15:0,54,641	0/0:22,0:22:57.08:0,57,626	0/0:30,0:30:75.21:0,75,893	0/0:19,0:19:51.15:0,51,606	1/1:3,20:23:54.05:512,54,0	1/1:2,22:24:60.09:579,60,0	1/1:0,10:10:30.05:290,30,0
chr10	69183670	.	ATGTTTC	A	13542.24	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=15.898;DP=669;FS=1.803;HRun=0;HaplotypeScore=153.5354;InbreedingCoeff=0.9891;MQ=80.28;MQ0=1;MQRankSum=-16.114;QD=51.30;ReadPosRankSum=-0.882;VQSLOD=4.8112;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,39:43:66.23:1553,66,0	0/0:7,0:7:21.07:0,21,748	0/0:34,0:35:78.91:0,79,2648	0/0:27,0:27:76.14:0,76,2278	1/1:0,16:16:42.14:990,42,0	0/0:19,0:19:57.20:0,57,2023	0/0:33,0:33:96.32:0,96,3245	1/1:2,38:40:99:2504,114,0	0/0:25,0:25:72.20:0,72,2349	1/1:2,18:19:57.20:1340,57,0	1/1:2,13:15:36.12:845,36,0	0/0:31,0:31:93.32:0,93,3311	0/0:27,0:27:81.28:0,81,2888	0/0:28,0:28:84.28:0,84,2642	0/0:39,0:39:99:0,117,4067	0/0:20,0:20:57.20:0,57,1991	0/0:31,0:31:90.31:0,90,3013	1/1:2,9:11:9.03:213,9,0	1/1:2,22:24:66.23:1493,66,0	1/1:1,17:18:42.14:986,42,0	1/1:4,31:35:36.04:845,36,0	0/0:20,0:20:60.21:0,60,2018	0/0:15,0:15:45.15:0,45,1432	0/0:19,0:19:57.15:0,57,1700	0/0:29,0:29:87.30:0,87,3097	1/1:0,20:20:60.21:1357,60,0	1/1:0,17:17:45.15:1063,45,0	1/1:0,5:5:15.05:354,15,0
chr10	69186274	.	CTCT	C	2347.97	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=-0.111;DP=735;FS=0.392;HRun=0;HaplotypeScore=112.7064;InbreedingCoeff=0.0981;MQ=63.51;MQ0=9;MQRankSum=-2.841;QD=8.27;ReadPosRankSum=-8.975;VQSLOD=0.1563;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:2,29:31:51.17:867,51,0	0/0:12,0:12:36.09:0,36,700	0/0:37,0:18:38.95:0,39,860	0/0:44,0:25:35.80:0,36,653	1/1:4,19:23:42.08:679,42,0	0/0:34,0:33:99:0,99,2062	0/0:24,0:24:72.18:0,72,1401	0/1:31,0:31:99:262,0,324	0/0:33,0:33:96.14:0,96,1993	0/1:37,0:37:99:168,0,657	0/1:24,0:24:99:111,0,436	0/0:24,0:24:69.23:0,69,1545	0/0:24,0:24:69.04:0,69,1228	0/0:22,0:22:60.10:0,60,1136	0/0:36,0:36:99:0,108,2172	0/0:27,0:27:81.21:0,81,1548	0/0:33,0:33:92.84:0,93,1839	0/1:25,0:25:50.54:51,0,539	0/1:20,0:19:96.06:96,0,327	0/1:18,0:18:59.72:60,0,296	0/1:25,0:25:53.08:53,0,525	0/0:21,0:21:63.19:0,63,1288	0/0:22,0:22:60.15:0,60,1161	0/0:27,0:27:75.14:0,75,1494	0/0:21,0:21:60.18:0,60,1335	0/1:37,0:37:55.21:55,0,795	0/0:10,0:10:22.87:0,23,280	0/1:13,0:13:99:113,0,167
chr10	69186398	.	C	CTG	1475.10	PASS	AB=0.921;AC=12;AF=0.214;AN=56;BaseQRankSum=4.345;DP=763;FS=11.435;HRun=0;HaplotypeScore=134.7024;InbreedingCoeff=-0.0921;MQ=52.85;MQ0=18;MQRankSum=-3.208;QD=5.78;ReadPosRankSum=-5.114;VQSLOD=0.3727;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:32,6:36:72.22:72,0,256	0/0:8,0:8:18.06:0,18,257	0/0:46,0:21:50.86:0,51,580	0/0:81,0:29:42.91:0,43,503	0/1:15,1:16:99:102,0,106	0/0:20,0:20:51.15:0,51,701	0/0:33,0:33:73.32:0,73,1111	0/1:17,4:17:99:191,0,203	0/0:22,0:22:63.21:0,63,899	0/1:24,1:25:78.70:79,0,468	0/0:8,0:8:3.01:0,3,43	0/0:32,0:32:90.30:0,90,1285	0/0:19,0:19:54.16:0,54,753	0/0:19,0:19:54.06:0,54,769	0/0:24,0:24:69.12:0,69,960	0/0:28,0:28:81.23:0,81,1118	0/0:40,0:39:99:0,105,1496	0/1:21,1:21:99:237,0,219	0/1:30,1:26:78.65:79,0,405	1/1:21,2:23:9.47:133,9,0	0/1:23,2:24:45.84:46,0,76	0/0:19,0:19:48.16:0,48,682	0/0:23,0:23:65.95:0,66,918	0/0:71,0:71:99:0,187,2641	0/0:14,0:14:39.13:0,39,548	0/1:31,5:36:99:584,0,314	0/1:12,2:14:71.70:72,0,102	0/1:4,0:4:34.17:34,0,110
chr10	69186416	.	G	GTCTC	6262.44	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=5.867;DP=716;FS=6.359;HRun=0;HaplotypeScore=133.4133;InbreedingCoeff=0.9136;MQ=51.95;MQ0=9;MQRankSum=-6.681;QD=25.67;ReadPosRankSum=-3.268;VQSLOD=3.5934;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:23,13:35:36.11:790,36,0	0/0:8,0:8:23.97:0,24,339	0/0:45,0:19:34.49:0,34,549	0/0:67,0:30:50.47:0,50,730	1/1:8,5:13:9.03:234,9,0	0/0:22,0:22:53.85:0,54,910	0/0:32,0:32:72.68:0,73,1265	1/1:5,15:17:22.15:754,22,0	0/0:26,0:26:66.09:0,66,1014	1/1:7,20:28:71.24:1390,71,0	1/1:7,4:12:5.38:86,5,0	0/0:28,0:28:78.24:0,78,1307	0/0:18,0:18:45.10:0,45,712	0/0:18,0:18:48.04:0,48,792	0/0:22,0:22:54.18:0,54,962	0/0:22,0:22:63.22:0,63,1120	0/0:42,0:41:96.05:0,96,1490	1/1:15,5:19:12.13:479,12,0	1/1:9,14:22:54.07:870,54,0	1/1:6,12:19:2.95:55,3,0	1/1:5,26:31:3.01:78,3,0	0/0:20,0:20:50.38:0,50,789	0/0:24,0:24:65.72:0,66,1024	0/0:64,0:64:99:0,159,2654	0/0:12,0:12:36.10:0,36,579	1/1:14,9:23:53.56:1026,54,0	1/1:3,11:14:15.35:253,15,0	1/1:1,4:5:11.53:247,12,0
chr10	69186453	.	CGT	C	328.45	PASS	AB=0.911;AC=13;AF=0.250;AN=52;BaseQRankSum=3.173;DP=697;FS=0.000;HRun=0;HaplotypeScore=132.3633;InbreedingCoeff=-0.2001;MQ=52.49;MQ0=23;MQRankSum=-0.112;QD=1.06;ReadPosRankSum=0.924;VQSLOD=2.4664;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:43,2:49:30.69:31,0,198	0/1:6,2:9:32.35:32,0,121	./.	./.	0/1:12,0:13:4.65:5,0,92	0/1:21,2:23:34.03:34,0,332	0/1:34,0:34:19.27:19,0,380	0/0:27,0:25:14.96:0,15,158	0/1:19,2:21:39.43:39,0,270	1/1:23,0:29:1.09:44,1,0	0/0:7,0:13:0:0,0,0	0/1:25,4:30:80.12:80,0,588	0/1:14,3:17:36.46:36,0,310	0/1:25,2:27:21.17:21,0,502	0/0:18,0:17:30.10:0,30,450	0/0:22,0:22:33.08:0,33,381	0/1:32,3:33:96.40:96,0,324	0/0:14,0:20:10.92:0,11,92	0/0:31,0:31:20.94:0,21,207	0/0:18,0:19:17.04:0,17,180	0/0:43,0:40:19.86:0,20,186	0/0:18,0:19:18.14:0,18,375	0/1:19,1:18:30.73:31,0,205	0/0:61,0:63:10.22:0,10,827	0/0:22,1:23:2.85:0,3,423	0/0:10,1:23:12.48:0,12,359	0/0:9,0:9:9.47:0,9,80	0/0:8,0:9:9.02:0,9,107
chr10	69188114	.	T	TA	1051.74	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-0.912;DP=506;FS=2.133;HRun=9;HaplotypeScore=48.7629;InbreedingCoeff=0.9174;MQ=64.12;MQ0=0;MQRankSum=-0.501;QD=26.29;ReadPosRankSum=1.187;VQSLOD=4.1636;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:95.93:0,96,830	0/0:7,0:7:21:0,21,182	0/0:8,0:7:12:0,12,104	0/0:7,0:7:14.96:0,15,124	0/0:21,0:21:47.91:0,48,405	0/0:21,0:21:59.99:0,60,521	0/0:20,0:20:41.97:0,42,364	0/0:38,0:38:92.95:0,93,804	0/0:14,0:14:41.99:0,42,365	1/1:3,14:17:45.02:480,45,0	1/1:3,20:23:63.17:693,63,0	0/0:20,0:20:53.96:0,54,462	0/0:13,0:13:35.99:0,36,312	0/0:19,0:19:50.98:0,51,443	0/0:15,1:16:8.81:0,9,305	0/0:24,0:24:68.98:0,69,599	0/0:19,0:19:53.97:0,54,465	0/0:21,0:21:36.07:0,36,402	0/0:13,0:13:29.98:0,30,257	0/0:10,0:10:29.99:0,30,260	0/0:27,0:27:65.95:0,66,568	0/0:15,0:15:32.99:0,33,286	0/0:14,0:14:35.99:0,36,312	0/0:16,0:16:35.97:0,36,312	0/0:23,0:23:59.97:0,60,517	0/0:23,0:23:59.98:0,60,521	0/0:16,0:16:38.99:0,39,339	0/0:3,0:3:9:0,9,78
chr10	69188169	.	C	CT	1376.14	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-1.545;DP=577;FS=3.247;HRun=0;HaplotypeScore=58.9197;InbreedingCoeff=0.9918;MQ=86.81;MQ0=0;MQRankSum=-1.554;QD=39.32;ReadPosRankSum=-0.213;VQSLOD=3.8982;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,132,1845	0/0:14,0:14:39.13:0,39,541	0/0:16,0:16:48.15:0,48,655	0/0:24,0:24:58.78:0,59,831	0/0:16,0:16:48.13:0,48,637	0/0:18,0:18:54.17:0,54,739	0/0:22,0:22:66.22:0,66,923	0/0:23,0:23:66.21:0,66,906	0/0:15,0:15:45.14:0,45,613	1/1:0,15:15:45.14:695,45,0	1/1:1,19:20:51.17:803,51,0	0/0:29,0:29:84.27:0,84,1156	0/0:17,0:17:51.17:0,51,713	0/0:20,0:20:60.20:0,60,839	0/0:18,0:18:54.17:0,54,737	0/0:24,0:24:72.24:0,72,1006	0/0:28,0:28:84.28:0,84,1174	0/0:19,0:19:57.17:0,57,773	0/0:17,0:17:51.16:0,51,695	0/0:15,0:15:42.13:0,42,568	0/0:34,0:34:99:0,99,1384	0/0:16,0:16:45.15:0,45,628	0/0:19,0:19:54.17:0,54,736	0/0:15,0:15:42.14:0,42,587	0/0:27,0:27:78.21:0,78,1052	0/0:24,0:24:69.23:0,69,965	0/0:23,0:23:69.23:0,69,965	0/0:5,0:5:15.05:0,15,210
chr10	69190262	.	GA	G	7282.33	PASS	AB=0.541;AC=15;AF=0.268;AN=56;BaseQRankSum=13.820;DP=683;FS=0.988;HRun=4;HaplotypeScore=83.4686;InbreedingCoeff=0.9083;MQ=88.06;MQ0=0;MQRankSum=-1.151;QD=35.70;ReadPosRankSum=-0.306;VQSLOD=4.8346;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,105,1548	0/0:8,0:8:21.07:0,21,312	0/0:24,0:24:69.23:0,69,982	0/0:23,0:23:63.20:0,63,904	0/0:14,0:14:42.13:0,42,610	0/0:30,0:30:87.28:0,87,1280	0/0:19,0:19:54.18:0,54,803	1/1:0,35:35:99:1321,105,0	0/0:28,0:28:81.27:0,81,1213	0/0:24,0:24:72.24:0,72,1079	0/0:31,0:31:90.29:0,90,1323	0/0:25,0:25:75.25:0,75,1123	0/0:23,0:23:69.22:0,69,1012	0/0:23,0:23:66.22:0,66,988	0/0:25,0:25:75.24:0,75,1105	0/0:33,0:33:93.31:0,93,1392	0/0:15,0:15:45.14:0,45,652	0/1:3,17:20:39.76:497,0,40	1/1:0,21:21:63.16:786,63,0	1/1:0,28:28:78.25:1013,78,0	1/1:0,26:26:72.23:931,72,0	0/0:22,0:22:66.22:0,66,989	0/0:24,0:24:69.23:0,69,1034	0/0:34,0:33:93.30:0,93,1375	0/0:19,0:19:54.18:0,54,789	1/1:1,35:36:99:1292,102,0	1/1:0,25:25:72.23:935,72,0	1/1:0,13:13:39.13:506,39,0
chr10	69192188	.	C	CA	2360.98	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.173;DP=798;FS=8.603;HRun=2;HaplotypeScore=96.8764;InbreedingCoeff=1.0000;MQ=85.86;MQ0=0;MQRankSum=-1.070;QD=38.70;ReadPosRankSum=0.791;VQSLOD=3.4549;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,120,1540	0/0:16,0:16:48.13:0,48,603	0/0:28,0:28:72.19:0,72,895	0/0:27,0:26:54.17:0,54,751	0/0:39,0:39:99:0,114,1447	0/0:33,0:33:90.27:0,90,1139	0/0:29,0:29:87.28:0,87,1130	0/0:27,0:27:78.25:0,78,1013	0/0:19,0:19:57.19:0,57,739	1/1:4,35:39:99:1539,108,0	1/1:1,21:22:63.21:944,63,0	0/0:26,0:26:72.22:0,72,920	0/0:39,0:39:99:0,105,1330	0/0:20,0:20:57.17:0,57,725	0/0:31,0:31:87.27:0,87,1116	0/0:30,0:30:87.27:0,87,1116	0/0:25,0:25:72.23:0,72,933	0/0:17,0:17:48.13:0,48,607	0/0:20,0:20:54.18:0,54,701	0/0:37,0:37:99:0,108,1383	0/0:34,0:34:99:0,102,1307	0/0:44,0:44:99:0,129,1659	0/0:18,0:18:54.18:0,54,701	0/0:27,0:27:81.22:0,81,1033	0/0:29,0:29:87.28:0,87,1128	0/0:33,0:33:62.45:0,62,1101	0/0:34,0:33:96.31:0,96,1244	0/0:14,0:14:39.13:0,39,506
chr10	69192789	.	CTT	C	624.82	PASS	AB=0.860;AC=6;AF=0.107;AN=56;BaseQRankSum=6.596;DP=634;FS=5.292;HRun=14;HaplotypeScore=102.4268;InbreedingCoeff=0.6232;MQ=75.34;MQ0=3;MQRankSum=-4.506;QD=6.51;ReadPosRankSum=-0.069;VQSLOD=1.0510;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:3,0:33:72.08:0,72,676	0/0:10,0:12:32.59:0,33,414	0/0:36,0:18:9.24:0,9,206	0/1:33,2:24:8.38:8,0,151	0/0:10,0:31:62.69:0,63,589	0/0:10,1:16:15.84:0,16,416	0/0:24,0:28:59.13:0,59,722	0/0:11,0:20:38.19:0,38,358	0/0:11,0:12:23.56:0,24,290	1/1:9,13:24:47.43:408,47,0	1/1:5,12:17:27.97:316,28,0	0/0:16,1:18:19.84:0,20,534	0/0:18,0:21:42.84:0,43,621	0/0:17,0:20:38.62:0,39,510	0/0:12,0:14:38.61:0,39,498	0/0:17,0:20:47.62:0,48,594	0/0:15,0:17:36.08:0,36,456	0/0:11,0:26:31.31:0,31,316	0/0:11,0:18:47.58:0,48,480	0/0:13,0:31:82.72:0,83,872	0/0:9,0:29:36.02:0,36,335	0/0:20,0:23:50.64:0,51,651	0/0:17,0:22:48.53:0,49,536	0/0:11,0:31:57.07:0,57,588	0/1:14,2:18:25.95:26,0,270	0/0:11,0:26:52.03:0,52,521	0/0:5,0:17:27.04:0,27,265	0/0:4,0:14:27.06:0,27,280
chr10	69192807	.	AC	A	1286.14	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=7.302;DP=608;FS=0.560;HRun=1;HaplotypeScore=87.2694;InbreedingCoeff=0.7922;MQ=77.85;MQ0=1;MQRankSum=-2.004;QD=17.15;ReadPosRankSum=-0.055;VQSLOD=3.6883;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:89.62:0,90,1206	0/0:12,0:12:33.07:0,33,492	0/0:33,1:17:25.74:0,26,346	0/1:32,0:23:10.74:11,0,359	0/0:31,0:31:81.22:0,81,1189	0/0:17,0:17:51.08:0,51,688	0/0:29,0:29:83.83:0,84,1207	0/0:26,0:26:77.89:0,78,1034	0/0:7,0:7:21.05:0,21,307	1/1:3,20:23:68.97:789,69,0	1/1:2,17:19:48.10:614,48,0	0/0:21,0:21:62.88:0,63,948	0/0:18,0:18:41.19:0,41,619	0/0:17,0:17:42.06:0,42,626	0/0:18,0:18:54.18:0,54,851	0/0:19,0:19:54.59:0,55,795	0/0:11,0:11:33.07:0,33,495	0/0:25,0:25:50.91:0,51,718	0/0:20,0:20:56.87:0,57,781	0/0:31,0:31:89.91:0,90,1231	0/0:20,0:20:42.11:0,42,619	0/0:24,0:24:69.17:0,69,1011	0/0:22,0:22:62.48:0,62,832	0/0:25,0:25:60.13:0,60,860	0/0:11,0:11:30.07:0,30,429	0/0:23,0:23:65.18:0,65,932	0/0:22,0:22:53.78:0,54,729	0/0:13,0:13:32.83:0,33,408
chr10	69194177	.	CCCCCCAGCAGTCACTGTGGCTACT	C	7966.67	PASS	AB=0.555;AC=22;AF=0.393;AN=56;BaseQRankSum=13.744;DP=683;FS=0.923;HRun=0;HaplotypeScore=374.9801;InbreedingCoeff=0.8486;MQ=81.92;MQ0=0;MQRankSum=-2.148;QD=28.35;ReadPosRankSum=-1.252;VQSLOD=2.2936;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:16,42:58:15.05:621,15,0	0/0:13,0:13:27.09:0,27,2712	0/0:21,0:21:15.78:0,16,414	0/0:18,0:18:15.07:0,15,948	1/1:5,19:24:22.19:664,22,0	0/0:24,0:24:60.18:0,60,3620	0/0:31,0:31:75.24:0,75,5609	1/1:13,12:25:36.07:517,36,0	0/0:24,0:24:60.17:0,60,5117	1/1:8,11:19:33.11:1148,33,0	0/1:2,9:11:0.52:27,0,1	0/0:28,0:28:66.21:0,66,4970	0/0:20,0:20:45.15:0,45,4113	0/0:35,0:35:96.77:0,97,8131	0/0:28,0:28:66.21:0,66,4943	0/0:25,0:25:66.22:0,66,4492	0/0:36,0:36:78.25:0,78,7105	0/1:6,22:28:99:180,0,657	1/1:4,13:17:39.10:1131,39,0	1/1:4,12:16:23.99:825,24,0	1/1:15,17:31:2.67:105,3,0	0/0:27,0:27:63.03:0,63,1824	0/0:19,0:19:36.04:0,36,1235	0/0:37,0:37:90.29:0,90,7027	0/0:16,0:16:36.09:0,36,1850	1/1:6,18:24:51.12:1429,51,0	1/1:6,14:20:18.06:1051,18,0	1/1:7,0:7:15.03:271,15,0
chr10	69196925	.	G	GAGGAGAGGC	26548.51	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-7.053;DP=703;FS=10.088;HRun=0;HaplotypeScore=185.7075;InbreedingCoeff=0.9947;MQ=78.57;MQ0=0;MQRankSum=-18.853;QD=84.01;ReadPosRankSum=-1.861;VQSLOD=3.5715;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,28:43:96.80:4428,97,0	0/0:12,0:12:36.12:0,36,1077	0/0:24,0:24:69.24:0,69,1937	0/0:27,0:27:75.22:0,75,2022	1/1:7,17:27:15.05:741,15,0	0/0:27,0:27:81.25:0,81,2428	0/0:31,0:31:90.31:0,90,2718	1/1:14,15:30:81.28:3076,81,0	0/0:21,0:21:63.22:0,63,1948	1/1:9,14:24:69.21:2714,69,0	1/1:4,8:16:14.86:693,15,0	0/0:22,0:22:63.19:0,63,1790	0/0:29,0:29:87.30:0,87,2591	0/0:11,0:11:27.09:0,27,835	0/0:34,0:34:99:0,102,3004	0/0:34,0:34:99:0,99,2914	0/0:21,0:21:63.22:0,63,1950	1/1:6,13:20:42.14:1874,42,0	1/1:10,13:25:69.20:2813,69,0	1/1:6,19:27:39.13:1848,39,0	1/1:13,14:33:21.07:838,21,0	0/0:29,0:29:87.30:0,87,2671	0/0:16,0:16:45.13:0,45,1175	0/0:27,0:27:78.27:0,78,2341	0/0:22,0:22:66.23:0,66,1992	1/1:3,19:27:78.18:3260,78,0	1/1:6,18:27:57.20:2815,57,0	1/1:7,9:16:36.12:1449,36,0
chr10	69197254	.	TTTCCCCC	T	1934.73	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=5.859;DP=678;FS=2.644;HRun=0;HaplotypeScore=176.2778;InbreedingCoeff=0.9984;MQ=82.78;MQ0=2;MQRankSum=-7.653;QD=53.74;ReadPosRankSum=-2.647;VQSLOD=3.2587;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,18:26:57.19:1433,57,0	0/0:13,0:13:39.13:0,39,1570	0/0:19,0:19:57.18:0,57,1964	0/0:22,0:22:60.18:0,60,2189	1/1:0,10:10:24.08:623,24,0	0/0:21,0:21:63.22:0,63,2502	0/0:32,0:32:93.32:0,93,3740	0/0:32,0:32:93.32:0,93,3692	0/0:27,0:27:81.26:0,81,3171	0/0:39,0:39:99:0,114,4496	0/0:9,0:9:27.09:0,27,1029	0/0:24,0:24:72.25:0,72,2794	0/0:27,0:27:81.28:0,81,3280	0/0:30,0:30:87.30:0,87,3535	0/0:25,0:25:72.25:0,72,2929	0/0:23,0:23:69.24:0,69,2740	0/0:30,0:30:90.27:0,90,3313	0/0:31,0:29:87.28:0,87,3217	0/0:23,0:23:63.20:0,63,2200	0/0:23,0:23:63.22:0,63,2572	0/0:23,0:23:69.22:0,69,2720	0/0:25,0:25:75.24:0,75,2816	0/0:16,0:16:48.16:0,48,1967	0/0:15,0:15:45.15:0,45,1775	0/0:29,0:29:87.30:0,87,3561	0/0:32,0:32:93.12:0,93,3786	0/0:31,0:31:81.01:0,81,3162	0/0:21,0:20:63.22:0,63,2532
chr10	69197285	.	G	GAT	13420.20	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-12.234;DP=700;FS=4.372;HRun=0;HaplotypeScore=89.5274;InbreedingCoeff=0.9999;MQ=85.96;MQ0=2;MQRankSum=-4.028;QD=41.81;ReadPosRankSum=-0.583;VQSLOD=6.4307;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,27:29:60.21:1037,60,0	0/0:13,0:13:39.13:0,39,518	0/0:27,0:27:60.19:0,60,789	0/0:23,0:23:51.12:0,51,637	1/1:2,18:20:42.14:726,42,0	0/0:14,0:14:36.12:0,36,479	0/0:31,0:31:75.23:0,75,984	1/1:5,30:36:93.30:1541,93,0	0/0:24,0:24:69.21:0,69,903	1/1:8,30:38:93.32:1588,93,0	1/1:1,15:17:36.12:622,36,0	0/0:26,0:26:63.19:0,63,823	0/0:28,0:28:81.22:0,81,1031	0/0:32,0:32:87.29:0,87,1155	0/0:26,0:26:69.23:0,69,917	0/0:15,0:15:42.14:0,42,559	0/0:34,0:34:99:0,99,1313	1/1:3,20:21:51.17:883,51,0	1/1:2,15:18:48.14:802,48,0	1/1:2,27:29:72.25:1245,72,0	1/1:2,28:30:84.29:1455,84,0	0/0:24,0:24:66.22:0,66,877	0/0:19,0:19:54.18:0,54,719	0/0:19,0:19:57.19:0,57,758	0/0:24,0:24:63.21:0,63,838	1/1:0,34:35:99:1704,99,0	1/1:2,26:28:60.21:1039,60,0	1/1:1,17:18:45.15:779,45,0
chr10	69197610	.	TTATCC	T	14831.56	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=16.946;DP=669;FS=4.443;HRun=0;HaplotypeScore=137.4080;InbreedingCoeff=0.9997;MQ=86.67;MQ0=0;MQRankSum=-10.690;QD=55.34;ReadPosRankSum=-0.245;VQSLOD=5.3824;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,42:42:87.21:1860,87,0	0/0:12,0:12:36.12:0,36,1170	0/0:31,0:31:61.46:0,61,2455	0/0:30,0:29:81.25:0,81,2289	1/1:0,18:18:32.75:717,33,0	0/0:19,0:19:57.20:0,57,1794	0/0:35,0:35:99:0,105,3346	1/1:0,22:22:66.23:1502,66,0	0/0:12,0:12:36.12:0,36,1198	1/1:1,23:24:72.25:1650,72,0	1/1:0,9:9:27.09:543,27,0	0/0:33,0:33:99:0,99,3147	0/0:26,0:26:78.27:0,78,2421	0/0:32,0:32:96.33:0,96,3168	0/0:21,0:21:63.22:0,63,2000	0/0:26,0:26:75.26:0,75,2471	0/0:36,0:36:99:0,108,3318	1/1:0,16:16:48.12:1054,48,0	1/1:0,16:16:48.12:1020,48,0	1/1:0,13:13:33.11:696,33,0	1/1:1,46:47:99:2189,108,0	0/0:20,0:20:60.21:0,60,1886	0/0:16,0:16:48.16:0,48,1546	0/0:25,0:25:75.26:0,75,2398	0/0:27,0:27:81.28:0,81,2566	1/1:0,24:24:72.25:1588,72,0	1/1:0,18:18:48.16:1118,48,0	1/1:0,19:19:39.13:895,39,0
chr10	69198307	.	TC	T	1484.71	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.356;DP=518;FS=1.978;HRun=2;HaplotypeScore=51.9852;InbreedingCoeff=0.9371;MQ=97.48;MQ0=0;MQRankSum=-4.785;QD=29.11;ReadPosRankSum=1.757;VQSLOD=3.3225;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,38:39:96.31:1245,96,0	0/0:3,0:3:9.03:0,9,131	0/0:25,0:25:72.24:0,72,1045	0/0:27,0:27:61.65:0,62,963	1/1:0,12:12:29.83:361,30,0	0/0:24,0:24:69.23:0,69,1032	0/0:33,0:33:99:0,99,1421	0/0:37,0:37:99:0,99,1386	0/0:16,0:16:45.14:0,45,647	0/0:12,0:12:33.10:0,33,476	0/0:7,0:7:21.04:0,21,273	0/0:20,0:20:60.15:0,60,872	0/0:10,0:10:27.05:0,27,377	0/0:21,0:21:63.21:0,63,940	0/0:17,0:17:48.16:0,48,719	0/0:23,0:23:63.21:0,63,936	0/0:20,0:20:57.12:0,57,826	0/0:21,0:21:63.20:0,63,922	0/0:18,0:18:54.12:0,54,760	0/0:15,0:15:42.14:0,42,624	0/0:24,0:24:69.23:0,69,1033	0/0:8,0:8:24.08:0,24,360	0/0:8,0:8:21.06:0,21,293	0/0:30,0:30:90.26:0,90,1323	0/0:11,0:11:33.11:0,33,494	0/0:23,0:23:66.18:0,66,962	0/0:11,0:11:33.11:0,33,494	0/0:3,0:3:9:0,9,112
chr10	69199721	.	C	CAAA	7673.62	PASS	AB=0.875;AC=21;AF=0.375;AN=56;BaseQRankSum=5.165;DP=604;FS=0.000;HRun=10;HaplotypeScore=101.8238;InbreedingCoeff=0.9305;MQ=73.99;MQ0=0;MQRankSum=-3.718;QD=32.24;ReadPosRankSum=-4.906;VQSLOD=3.0477;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:28:72.08:0,72,854	0/0:13,0:14:39.05:0,39,455	0/0:16,0:18:20.47:0,20,216	0/1:6,0:6:5.59:6,0,63	0/0:26,0:26:57.07:0,57,693	0/0:18,0:18:46.44:0,46,581	0/0:20,0:21:46.39:0,46,556	1/1:10,10:24:48.10:802,48,0	0/0:19,0:19:51.10:0,51,620	1/1:5,8:16:33.09:570,33,0	1/1:4,20:26:64.04:1084,64,0	0/0:17,0:17:48.12:0,48,584	0/0:17,0:17:45.11:0,45,547	0/0:14,0:14:36.08:0,36,438	0/0:27,0:27:72.18:0,72,861	0/0:23,0:23:54.09:0,54,644	0/0:22,0:22:57.12:0,57,677	1/1:3,1:32:74.23:586,74,0	1/1:9,8:20:33.06:550,33,0	1/1:11,20:33:72.20:1163,72,0	1/1:3,5:9:9.01:138,9,0	0/0:22,0:24:64.48:0,64,781	0/0:29,0:30:80.78:0,81,966	0/0:15,0:15:39.09:0,39,474	0/0:33,0:33:93.25:0,93,1131	1/1:6,20:31:69.19:1249,69,0	1/1:6,16:26:51.04:903,51,0	1/1:0,12:14:36.08:622,36,0
chr10	69200075	.	CG	C	8497.85	PASS	AB=0.521;AC=15;AF=0.268;AN=56;BaseQRankSum=19.371;DP=816;FS=3.789;HRun=1;HaplotypeScore=98.3626;InbreedingCoeff=0.9096;MQ=82.82;MQ0=0;MQRankSum=-0.380;QD=37.94;ReadPosRankSum=-0.415;VQSLOD=4.7658;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,138,2145	0/0:13,0:13:39.09:0,39,594	0/0:22,0:22:62.97:0,63,915	0/0:27,0:28:69.03:0,69,1044	0/0:20,0:20:54.18:0,54,859	0/0:20,0:20:60.17:0,60,908	0/0:34,0:34:99:0,102,1549	1/1:0,29:29:87.19:1083,87,0	0/0:39,0:39:99:0,117,1756	0/0:31,0:31:93.25:0,93,1405	0/0:16,0:16:42.13:0,42,645	0/0:37,0:37:99:0,111,1768	0/0:37,0:37:99:0,111,1732	0/0:48,0:48:99:0,141,2188	0/0:42,0:42:99:0,126,1987	0/0:42,0:42:99:0,126,1931	0/0:27,0:27:81.25:0,81,1266	1/1:0,23:23:63.21:881,63,0	1/1:1,30:31:93.20:1216,93,0	1/1:0,22:22:66.08:854,66,0	1/1:0,52:52:99:2027,147,0	0/0:21,0:21:57.14:0,57,856	0/0:19,0:19:45.15:0,45,711	0/0:30,0:30:90.26:0,90,1407	0/0:19,0:19:51.17:0,51,805	0/1:2,23:25:20.64:889,0,21	1/1:0,31:31:81.27:1132,81,0	1/1:0,11:11:30.10:417,30,0
chr10	69202759	.	TGAGTGAGTGAGTGAATGAAA	T	2240.25	PASS	AB=1.000;AC=20;AF=0.357;AN=56;BaseQRankSum=13.036;DP=820;FS=0.381;HRun=0;HaplotypeScore=322.5158;InbreedingCoeff=0.6765;MQ=50.48;MQ0=55;MQRankSum=-6.662;QD=6.63;ReadPosRankSum=-4.361;VQSLOD=1.2123;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:32,0:29:10.51:11,0,91	0/0:17,0:17:50.97:0,51,622	0/0:16,0:7:20.16:0,20,159	0/0:19,0:3:2.44:0,2,42	0/1:24,0:22:31.40:31,0,49	0/0:30,0:30:87.08:0,87,1171	0/0:25,0:17:44.90:0,45,516	0/1:29,0:18:28.18:107,0,28	0/0:31,0:31:90.17:0,90,1459	1/1:27,0:24:59.64:599,60,0	1/1:3,8:10:11.79:79,12,0	0/0:36,0:35:99:0,102,1676	0/0:32,0:32:78.05:0,78,1112	0/0:32,0:31:90.07:0,90,1117	0/0:49,0:48:99:0,132,1998	0/0:38,0:37:99:0,108,1428	0/0:29,0:27:73.46:0,73,1101	1/1:39,0:27:33.73:258,34,0	1/1:10,0:6:14.84:101,15,0	0/1:34,0:27:5.80:229,0,6	1/1:35,0:21:18.19:126,18,0	0/0:29,0:29:84.08:0,84,1324	0/0:22,0:22:66.07:0,66,819	0/0:50,0:47:99:0,126,1748	0/0:27,0:26:75.06:0,75,1065	1/1:41,0:26:60.61:474,61,0	1/1:32,0:21:26.42:240,26,0	1/1:24,0:15:26.55:190,27,0
chr10	69202802	.	ATGAG	A	1868.66	PASS	AB=0.793;AC=9;AF=0.167;AN=54;BaseQRankSum=10.284;DP=896;FS=6.360;HRun=0;HaplotypeScore=138.5318;InbreedingCoeff=-0.1904;MQ=50.25;MQ0=53;MQRankSum=-3.415;QD=5.79;ReadPosRankSum=-5.013;VQSLOD=0.1745;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:28:23.74:46,0,24	0/0:14,0:14:39.10:0,39,739	./.	0/0:32,0:4:5.97:0,6,75	0/1:24,0:23:15.51:27,0,16	0/0:20,0:20:57.11:0,57,1025	0/0:31,0:27:75.12:0,75,1432	0/1:49,0:23:4.83:5,0,548	0/0:34,0:34:93.23:0,93,1873	0/0:39,0:36:99:0,99,1750	0/0:9,0:9:14.88:0,15,211	0/0:44,0:44:99:0,117,2360	0/0:30,0:30:81.09:0,81,1320	0/0:31,0:31:87.20:0,87,1695	0/0:45,0:44:99:0,123,2253	0/0:40,0:39:99:0,108,2259	0/0:25,0:24:40.57:0,41,1149	0/0:42,0:29:36.01:0,36,623	0/1:15,16:19:79.61:376,0,80	0/1:16,24:33:65.14:65,0,285	0/1:47,0:34:99:456,0,114	0/0:24,0:24:60.14:0,60,1148	0/0:25,0:25:63.14:0,63,1204	0/0:45,0:43:99:0,99,1889	0/0:28,0:28:75.20:0,75,1464	0/1:20,28:37:99:752,0,530	0/1:10,26:30:99:265,0,125	0/1:8,10:12:11.98:12,0,66
chr10	69202814	.	GTGAA	G	806.81	PASS	AB=1.000;AC=8;AF=0.148;AN=54;BaseQRankSum=10.473;DP=897;FS=0.000;HRun=0;HaplotypeScore=147.2385;InbreedingCoeff=0.3471;MQ=50.70;MQ0=54;MQRankSum=-4.122;QD=3.67;ReadPosRankSum=0.738;VQSLOD=2.1024;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:6,23:27:14.86:160,15,0	0/0:15,0:15:39.11:0,39,797	./.	0/0:26,0:5:12.03:0,12,165	1/1:2,23:23:8.42:85,8,0	0/0:24,0:24:57.08:0,57,933	0/0:32,0:28:72.19:0,72,1410	0/0:49,0:19:50.80:0,51,503	0/0:34,0:34:96.25:0,96,1984	0/0:45,0:41:99:0,107,1840	0/0:11,0:11:21.04:0,21,330	0/0:43,0:43:99:0,117,2661	0/0:29,0:29:69.10:0,69,1160	0/0:29,0:29:75.20:0,75,1674	0/0:50,0:49:99:0,114,2298	0/0:43,0:42:99:0,117,2356	0/0:25,0:24:35.70:0,36,1209	0/0:40,0:27:31.88:0,32,430	0/1:32,0:19:60.99:117,0,61	0/0:39,0:34:24.35:0,24,239	0/1:52,0:39:99:145,0,150	0/0:21,0:20:48.12:0,48,1039	0/0:24,0:24:66.14:0,66,1212	0/0:38,0:37:92.40:0,92,1887	0/0:25,0:25:66.19:0,66,1316	0/1:47,0:39:99:299,0,437	0/1:35,0:30:99:140,0,106	0/0:18,0:12:3.01:0,3,50
chr10	69203984	.	A	AG	778.62	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-5.578;DP=755;FS=10.563;HRun=5;HaplotypeScore=75.1204;InbreedingCoeff=0.9914;MQ=92.91;MQ0=0;MQRankSum=-2.123;QD=29.95;ReadPosRankSum=1.232;VQSLOD=3.7018;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,135,1443	0/0:14,0:14:42.10:0,42,445	0/0:31,0:32:80.73:0,81,827	0/0:31,0:31:80.95:0,81,817	0/0:24,0:24:63.12:0,63,661	0/0:27,0:27:75.14:0,75,782	0/0:35,0:35:99:0,102,1079	0/0:26,0:26:72.17:0,72,767	0/0:25,0:25:66.13:0,66,692	0/0:35,0:35:99:0,99,1064	0/0:24,0:24:66.16:0,66,708	0/0:36,0:36:99:0,105,1128	0/0:26,0:26:75.16:0,75,790	0/0:28,0:28:81.20:0,81,871	0/0:27,0:27:81.18:0,81,860	0/0:31,0:31:87.18:0,87,918	0/0:38,0:38:99:0,111,1183	1/1:2,24:26:39.99:873,40,0	0/0:17,0:17:45.10:0,45,477	0/0:20,0:20:48.10:0,48,508	0/0:35,0:35:99:0,99,1049	0/0:23,0:23:69.14:0,69,723	0/0:24,0:24:69.17:0,69,741	0/0:23,0:23:57.12:0,57,605	0/0:12,0:12:30.07:0,30,322	0/0:26,0:26:72.18:0,72,774	0/0:35,0:35:96.22:0,96,1023	0/0:6,0:6:18.05:0,18,193
chr10	69206257	.	TAC	T	10849.18	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=19.147;DP=1217;FS=1.113;HRun=0;HaplotypeScore=163.2799;InbreedingCoeff=0.9993;MQ=57.53;MQ0=7;MQRankSum=-0.894;QD=29.40;ReadPosRankSum=-1.136;VQSLOD=5.6120;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,31:40:99:1308,105,0	0/0:15,0:15:42.14:0,42,697	0/0:45,0:29:43.92:0,44,642	0/0:48,0:36:51.42:0,51,912	1/1:3,31:34:84.27:1069,84,0	0/0:36,0:36:92.34:0,92,1490	0/0:37,0:37:63.19:0,63,1020	1/1:15,36:51:94.43:1329,94,0	0/0:43,0:43:99:0,120,1989	0/0:52,0:51:99:0,110,2152	0/0:28,0:28:69.24:0,69,1147	0/0:61,0:61:99:0,169,2796	0/0:48,0:48:99:0,126,2058	0/0:55,0:55:99:0,141,2323	0/0:70,0:70:99:0,184,3023	0/0:69,0:68:99:0,181,2922	0/0:32,0:31:20.59:0,21,1178	0/0:39,1:41:91.90:0,92,1561	1/1:8,20:26:60.15:719,60,0	1/1:7,39:45:99:1352,108,0	1/1:14,54:67:99:2144,167,0	0/0:40,0:40:96.80:0,97,1591	0/0:33,0:33:87.25:0,87,1385	0/0:55,0:56:99:0,141,2343	0/0:39,0:39:99:0,100,1620	1/1:6,39:44:99:1359,108,0	1/1:6,31:37:78.25:993,78,0	1/1:3,15:18:46.39:576,46,0
chr10	69206402	.	TACACACACC	T	3656.31	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=10.934;DP=1390;FS=5.084;HRun=0;HaplotypeScore=380.6834;InbreedingCoeff=0.9994;MQ=57.23;MQ0=4;MQRankSum=-6.553;QD=50.78;ReadPosRankSum=0.122;VQSLOD=2.6506;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,133,5078	0/0:22,0:22:60.21:0,60,2564	0/0:41,0:27:63.21:0,63,2265	0/0:44,0:34:89.33:0,89,2748	0/0:35,0:35:99:0,102,3813	0/0:42,0:40:99:0,114,4811	0/0:37,0:36:99:0,102,3806	0/0:45,0:44:99:0,99,3443	0/0:68,0:68:99:0,141,7395	1/1:7,44:48:99:2986,111,0	1/1:4,17:19:27.09:670,27,0	0/0:81,0:81:99:0,223,9117	0/0:72,0:72:99:0,199,8076	0/0:88,0:88:99:0,214,9090	0/0:93,0:93:99:0,265,10849	0/0:83,0:83:99:0,244,9876	0/0:41,0:40:99:0,102,3899	0/0:47,0:47:99:0,109,5234	0/0:19,0:19:51.15:0,51,1971	0/0:34,0:34:72.72:0,73,2912	0/0:88,0:88:99:0,241,10014	0/0:50,0:50:99:0,132,5555	0/0:35,0:35:96.33:0,96,4126	0/0:45,0:44:99:0,108,4356	0/0:39,0:39:96.33:0,96,3914	0/0:49,1:50:47.13:0,47,5716	0/0:52,0:52:99:0,148,6470	0/0:12,0:12:36.12:0,36,1578
chr10	69206409	.	AC	A	445.59	PASS	AB=0.952;AC=3;AF=0.054;AN=56;BaseQRankSum=11.533;DP=1392;FS=0.529;HRun=2;HaplotypeScore=172.2035;InbreedingCoeff=0.6680;MQ=57.50;MQ0=9;MQRankSum=-6.465;QD=6.75;ReadPosRankSum=1.609;VQSLOD=0.7968;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:55,1:56:73.70:0,74,1994	0/0:21,0:21:63.21:0,63,938	0/0:43,0:26:75.24:0,75,1046	0/0:47,1:35:97.05:0,97,1363	0/0:37,0:37:99:0,111,1596	0/0:41,0:39:99:0,120,1773	0/0:40,0:39:99:0,120,1700	0/0:41,0:40:99:0,114,1631	0/0:63,1:64:99:0,130,2611	1/1:45,1:43:80.43:538,80,0	0/1:19,1:18:10.91:11,0,24	0/0:81,0:81:99:0,220,3336	0/0:74,0:74:99:0,220,3162	0/0:82,0:82:99:0,232,3384	0/0:95,1:96:99:0,280,4116	0/0:90,0:90:99:0,271,3856	0/0:38,0:37:99:0,105,1490	0/0:46,1:46:92.07:0,92,1815	0/0:22,0:21:60.18:0,60,834	0/0:33,0:33:81.73:0,82,1175	0/0:91,0:91:99:0,222,3598	0/0:48,0:48:99:0,144,2117	0/0:32,0:32:96.32:0,96,1434	0/0:42,2:43:99:0,114,1627	0/0:37,1:38:99:0,108,1586	0/0:51,0:51:99:0,136,2090	0/0:53,0:53:99:0,156,2275	0/0:15,0:15:39.13:0,39,568
chr10	69206680	.	CACATACTCA	C	14193.94	PASS	AB=0.980;AC=21;AF=0.375;AN=56;BaseQRankSum=17.479;DP=1249;FS=30.372;HRun=0;HaplotypeScore=383.8208;InbreedingCoeff=0.9171;MQ=57.75;MQ0=2;MQRankSum=-13.241;QD=43.01;ReadPosRankSum=-3.309;VQSLOD=3.3829;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:55:99:0,131,5712	0/0:22,0:22:63.19:0,63,2677	0/0:51,0:42:99:0,102,3478	0/0:53,0:47:99:0,117,4161	0/0:38,0:38:99:0,100,4364	0/0:38,0:36:99:0,99,4199	0/0:43,0:43:99:0,102,4502	1/1:5,24:24:39.11:773,39,0	0/0:69,0:69:99:0,199,8314	1/1:7,47:53:99:3121,126,0	1/1:4,8:11:21.07:556,21,0	0/0:74,0:73:99:0,196,7956	0/0:67,0:67:99:0,181,7779	0/0:59,0:59:99:0,151,6704	0/0:70,0:70:99:0,190,7786	0/0:77,0:77:99:0,214,9397	0/1:49,1:50:14.26:14,0,4712	1/1:12,7:18:28.97:783,29,0	1/1:4,5:9:9.03:264,9,0	1/1:1,27:24:57.20:1466,57,0	1/1:38,15:48:60.46:1354,60,0	0/0:52,0:52:99:0,144,6260	0/0:44,0:44:99:0,120,4859	0/0:70,0:69:99:0,181,7763	0/0:37,0:37:99:0,102,4249	1/1:7,27:33:87.30:2508,87,0	1/1:8,22:30:87.30:2411,87,0	1/1:1,11:12:33.11:945,33,0
chr10	69206687	.	TCAA	T	3083.15	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=19.949;DP=1216;FS=28.685;HRun=0;HaplotypeScore=280.2414;InbreedingCoeff=0.9824;MQ=58.24;MQ0=2;MQRankSum=-13.711;QD=12.09;ReadPosRankSum=-2.718;VQSLOD=1.3242;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:56:99:0,118,3251	0/0:23,0:23:66.20:0,66,1467	0/0:51,0:46:99:0,120,2718	0/0:62,0:53:99:0,146,3002	0/0:37,0:37:99:0,106,2370	0/0:38,0:38:99:0,109,2394	0/0:41,0:41:99:0,114,2579	1/1:25,0:20:34.22:209,34,0	0/0:68,0:68:99:0,205,4477	1/1:49,0:48:99:688,106,0	1/1:10,0:9:20.50:129,20,0	0/0:72,0:71:99:0,211,4697	0/0:64,0:64:99:0,184,4217	0/0:57,0:57:99:0,157,3585	0/0:68,0:67:99:0,202,4363	0/0:72,0:72:99:0,214,4878	0/0:50,0:50:77.57:0,78,2656	1/1:19,0:18:32.15:239,32,0	1/1:7,0:7:5.64:57,6,0	1/1:27,0:23:55.82:366,56,0	1/1:42,4:42:44.69:277,45,0	0/0:52,0:52:99:0,154,3505	0/0:42,0:42:99:0,126,2782	0/0:70,0:69:99:0,196,4296	0/0:38,0:38:99:0,108,2382	1/1:31,0:30:86.22:590,86,0	1/1:29,0:28:79.63:531,80,0	1/1:11,0:11:32.35:215,32,0
chr10	69206688	.	CA	C	3007.99	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=20.685;DP=1214;FS=38.038;HRun=2;HaplotypeScore=237.4290;InbreedingCoeff=0.9930;MQ=58.21;MQ0=2;MQRankSum=-14.014;QD=11.94;ReadPosRankSum=-3.395;VQSLOD=-0.3250;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:54,1:56:99:0,133,2112	0/0:23,0:23:66.20:0,66,966	0/0:51,0:46:99:0,129,1850	0/0:64,0:55:99:0,148,2079	0/0:37,0:37:99:0,106,1550	0/0:38,0:38:99:0,105,1549	0/0:41,0:41:99:0,114,1691	1/1:25,0:20:38.08:355,38,0	0/0:69,0:69:99:0,205,2961	1/1:49,0:48:99:724,109,0	1/1:9,0:8:19.43:143,19,0	0/0:73,0:72:99:0,214,3113	0/0:62,0:62:99:0,184,2741	0/0:56,0:56:99:0,157,2338	0/0:67,0:66:99:0,199,2871	0/0:73,0:73:99:0,220,3242	0/0:47,2:49:92.23:0,92,1734	1/1:14,5:18:33.77:185,34,0	1/1:6,1:7:10.82:65,11,0	1/1:27,0:23:53.80:535,54,0	1/1:36,10:41:53.57:473,54,0	0/0:54,0:54:99:0,160,2340	0/0:43,0:43:99:0,113,1805	0/0:69,0:68:99:0,192,2813	0/0:37,0:37:99:0,108,1590	1/1:28,2:29:70.32:300,70,0	1/1:29,0:28:70.17:354,70,0	1/1:11,0:11:26.74:95,27,0
chr10	69206689	.	A	AC	4034.60	PASS	AB=0.986;AC=18;AF=0.321;AN=56;BaseQRankSum=15.712;DP=1230;FS=36.557;HRun=1;HaplotypeScore=247.2652;InbreedingCoeff=0.7824;MQ=57.78;MQ0=2;MQRankSum=-7.893;QD=14.83;ReadPosRankSum=-10.131;VQSLOD=-0.1736;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:54,1:56:99:0,101,1944	0/0:23,0:23:66.19:0,66,901	0/0:51,0:46:99:0,129,1740	0/0:62,0:53:99:0,136,1918	0/0:38,0:38:99:0,105,1448	0/0:38,0:38:99:0,108,1473	0/0:40,0:40:99:0,114,1579	1/1:25,1:21:38.50:438,38,0	0/0:70,0:70:99:0,205,2768	1/1:48,0:47:19.06:754,19,0	1/1:9,0:8:15.16:228,15,0	0/0:72,0:71:99:0,214,2907	0/0:62,0:62:99:0,184,2557	0/0:54,0:54:99:0,157,2180	0/0:67,0:66:99:0,199,2682	0/0:74,0:74:99:0,220,3025	0/0:48,0:48:93.43:0,93,1621	1/1:19,4:22:5.36:265,5,0	1/1:9,0:9:2.36:58,2,0	1/1:29,0:24:54:649,54,0	1/1:35,13:43:61.63:790,62,0	0/0:53,0:53:99:0,160,2186	0/0:43,0:43:99:0,103,1673	0/0:68,1:68:99:0,192,2627	0/0:37,0:37:99:0,108,1481	0/1:34,1:34:27.29:256,0,27	1/1:25,6:30:18.27:526,18,0	0/1:14,0:14:13.92:71,0,14
chr10	69206693	.	TACTC	T	1967.80	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=18.571;DP=1234;FS=16.783;HRun=0;HaplotypeScore=316.3773;InbreedingCoeff=0.2901;MQ=58.10;MQ0=2;MQRankSum=-14.714;QD=6.95;ReadPosRankSum=-0.096;VQSLOD=1.1266;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:57:99:0,140,3688	0/0:22,0:22:63.22:0,63,1720	0/0:52,0:44:99:0,122,2504	0/0:58,0:47:99:0,132,2988	0/0:37,0:37:99:0,102,2749	0/0:39,0:39:99:0,105,2690	0/0:40,0:40:99:0,114,3002	0/1:31,0:26:40.57:41,0,427	0/0:69,0:69:99:0,202,5201	0/1:50,0:49:99:440,0,171	1/1:9,0:8:15.52:89,16,0	0/0:74,0:73:99:0,199,5032	0/0:64,0:64:99:0,190,4816	0/0:59,0:59:99:0,172,4408	0/0:65,0:64:99:0,187,4815	0/0:75,0:75:99:0,223,5759	0/0:48,0:48:98.60:0,99,3202	0/1:25,0:24:99:118,0,276	0/1:10,0:10:39.33:39,0,322	1/1:29,0:24:44.72:204,45,0	1/1:42,4:41:14.36:115,14,0	0/0:51,0:51:99:0,153,4017	0/0:41,0:41:99:0,120,2992	0/0:64,0:63:99:0,177,4750	0/0:36,0:36:99:0,99,2636	0/1:35,0:34:99:498,0,282	0/1:33,0:31:70.28:420,0,70	0/1:15,0:15:60.38:174,0,60
chr10	69206729	.	CACACACAT	C	7198.24	PASS	AB=0.762;AC=11;AF=0.196;AN=56;BaseQRankSum=10.080;DP=1217;FS=6.209;HRun=0;HaplotypeScore=368.8057;InbreedingCoeff=0.6512;MQ=52.88;MQ0=14;MQRankSum=-12.294;QD=31.30;ReadPosRankSum=-2.405;VQSLOD=3.3047;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,139,4835	0/0:22,0:22:60.21:0,60,2324	0/0:67,0:28:57.19:0,57,1446	0/0:59,0:25:45.09:0,45,1240	0/0:30,0:30:72.11:0,72,2718	0/0:27,0:27:72.25:0,72,2715	0/0:36,0:36:78.27:0,78,2720	1/1:20,21:38:76.98:1911,77,0	0/0:72,0:72:99:0,177,7058	0/0:62,0:60:99:0,147,5031	0/0:10,0:9:11.17:0,11,502	0/0:59,0:58:99:0,138,5406	0/0:54,0:54:99:0,138,4919	0/0:48,0:48:99:0,126,4992	0/0:67,0:66:99:0,158,6106	0/0:62,0:62:99:0,162,5965	0/0:47,0:46:99:0,117,4525	0/0:27,0:26:69.10:0,69,2213	0/1:20,4:22:99:492,0,139	1/1:7,17:19:16.61:393,17,0	0/1:40,10:45:77.07:174,0,77	0/0:48,0:48:99:0,123,4668	0/0:37,0:37:91.19:0,91,3036	0/0:67,0:67:99:0,166,5613	0/0:32,0:32:69.24:0,69,2652	0/1:14,30:43:99:2194,0,123	1/1:12,20:31:54.14:1291,54,0	1/1:6,9:15:30.35:742,30,0
chr10	69206802	.	T	TACACAC	3690.84	PASS	AC=20;AF=0.370;AN=54;BaseQRankSum=1.715;DP=925;FS=17.049;HRun=0;HaplotypeScore=248.5343;InbreedingCoeff=0.8976;MQ=53.64;MQ0=11;MQRankSum=-1.147;QD=11.36;ReadPosRankSum=-5.240;VQSLOD=0.5337;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:48:42.60:0,43,806	0/0:13,0:13:21.04:0,21,352	1/1:47,0:20:1.55:4,2,0	./.	0/0:14,0:16:15.05:0,15,263	0/0:23,0:25:42.99:0,43,776	0/0:36,0:36:46.21:0,46,1017	1/1:34,0:30:6.48:87,6,0	0/0:39,0:43:19.01:0,19,927	1/1:24,2:36:36.08:655,36,0	1/1:15,1:14:6.02:87,6,0	0/0:38,0:36:53.92:0,54,1000	0/0:26,0:30:55.05:0,55,958	0/0:30,0:29:36.12:0,36,727	0/0:41,0:45:50.85:0,51,1110	0/0:43,0:46:84.56:0,85,1602	0/0:29,0:29:11.08:0,11,645	0/0:12,0:23:25.45:0,25,469	1/1:12,0:16:17.97:292,18,0	1/1:20,0:24:33.09:486,33,0	1/1:60,0:65:61.10:782,61,0	0/0:27,0:31:57.60:0,58,1030	0/0:22,0:23:4.76:0,5,488	0/0:49,0:49:78.14:0,78,1596	0/0:27,0:29:7.58:0,8,353	1/1:29,0:31:42.77:651,43,0	1/1:13,0:34:25.77:343,26,0	1/1:10,0:15:20.31:304,20,0
chr10	69207285	.	T	TG	10198.52	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-12.509;DP=656;FS=10.514;HRun=0;HaplotypeScore=61.1382;InbreedingCoeff=0.9986;MQ=83.59;MQ0=0;MQRankSum=-1.941;QD=44.34;ReadPosRankSum=1.688;VQSLOD=4.7665;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:99:0,99,1379	0/0:12,0:12:36.12:0,36,503	0/0:21,0:22:59.50:0,59,732	0/0:19,0:19:51.47:0,51,609	0/0:43,0:43:99:0,126,1722	0/0:29,0:28:84.28:0,84,1172	0/0:14,0:14:39.13:0,39,545	1/1:1,34:35:99:1602,102,0	0/0:28,0:28:84.25:0,84,1138	1/1:1,27:28:81.28:1293,81,0	1/1:0,17:17:51.04:782,51,0	0/0:19,0:19:51.17:0,51,693	0/0:24,0:24:72.24:0,72,1006	0/0:19,0:19:57.19:0,57,795	0/0:15,0:15:45.13:0,45,609	0/0:30,0:30:87.29:0,87,1215	0/0:20,0:20:60.20:0,60,828	1/1:1,24:24:72.20:1123,72,0	1/1:0,9:9:27.07:406,27,0	1/1:0,28:28:78.26:1232,78,0	1/1:0,23:23:57.19:911,57,0	0/0:21,0:21:60.18:0,60,820	0/0:25,0:25:69.23:0,69,964	0/0:22,0:21:66.22:0,66,920	0/0:31,0:31:93.31:0,93,1297	1/1:1,20:21:60.19:934,60,0	1/1:0,37:37:99:1627,102,0	1/1:0,7:7:18.06:287,18,0
chr10	69207642	.	GA	G	4210.95	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=12.115;DP=615;FS=0.712;HRun=10;HaplotypeScore=67.4940;InbreedingCoeff=0.9515;MQ=73.48;MQ0=1;MQRankSum=-1.379;QD=18.72;ReadPosRankSum=0.634;VQSLOD=5.5412;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,108,1158	0/0:9,0:9:27.07:0,27,298	0/0:23,0:20:37.22:0,37,347	0/1:17,0:13:2.24:2,0,208	0/0:32,0:32:72.18:0,72,785	0/0:19,0:19:51.14:0,51,564	0/0:23,0:23:69.16:0,69,746	1/1:4,24:28:71.94:619,72,0	0/0:14,0:14:36.06:0,36,384	1/1:7,19:26:56.98:495,57,0	1/1:5,22:27:59.97:521,60,0	0/0:20,0:20:45.08:0,45,484	0/0:27,0:27:69.13:0,69,741	0/0:18,0:18:51.14:0,51,561	0/0:28,0:28:72.17:0,72,780	0/0:24,0:24:63.17:0,63,697	0/0:35,0:35:61.19:0,61,884	1/1:1,13:14:38.99:339,39,0	1/1:3,17:20:47.93:417,48,0	1/1:1,17:18:47.97:417,48,0	1/1:2,16:18:38.99:339,39,0	0/0:15,0:15:39.10:0,39,424	0/0:21,0:22:50.97:0,51,545	0/0:19,0:19:51.14:0,51,564	0/0:23,0:23:42.11:0,42,458	1/1:4,17:21:28.62:413,29,0	1/1:3,20:23:44.88:390,45,0	1/1:0,13:13:29.99:260,30,0
chr10	69208035	.	TCC	T	255.94	PASS	AB=0.917;AC=5;AF=0.089;AN=56;BaseQRankSum=6.519;DP=450;FS=3.932;HRun=4;HaplotypeScore=62.1972;InbreedingCoeff=0.8306;MQ=85.72;MQ0=1;MQRankSum=-6.549;QD=8.83;ReadPosRankSum=1.226;VQSLOD=-0.0083;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:81.28:0,81,1503	0/0:7,0:7:21.07:0,21,393	0/0:22,0:22:60.04:0,60,1023	0/0:26,0:25:75.23:0,75,1289	0/0:8,0:8:21.07:0,21,386	0/0:15,0:15:42.14:0,42,784	0/0:22,0:22:66.23:0,66,1206	0/0:25,0:25:60.21:0,60,1105	0/0:23,0:23:63.22:0,63,1170	1/1:4,6:10:17.71:170,18,0	1/1:0,8:8:23.98:204,24,0	0/0:11,0:11:33.11:0,33,618	0/0:13,0:13:39.13:0,39,725	0/0:18,0:18:54.19:0,54,1002	0/0:13,0:13:39.13:0,39,730	0/0:8,0:8:24.08:0,24,450	0/0:23,0:23:69.24:0,69,1277	0/0:10,0:10:30.10:0,30,562	0/0:16,0:16:39.13:0,39,731	0/0:8,0:8:24.07:0,24,411	0/0:19,0:19:54.19:0,54,992	0/0:10,0:10:30.10:0,30,562	0/0:13,0:13:39.13:0,39,723	0/0:35,0:35:99:0,105,1951	0/0:20,0:20:60.21:0,60,1124	0/1:10,1:11:2.98:3,0,476	0/0:22,0:22:63.22:0,63,1180	0/0:6,0:6:18.06:0,18,303
chr10	69208040	.	T	TAGG	663.89	PASS	AB=0.929;AC=5;AF=0.089;AN=56;BaseQRankSum=6.838;DP=469;FS=8.961;HRun=0;HaplotypeScore=79.7015;InbreedingCoeff=0.7658;MQ=89.36;MQ0=1;MQRankSum=-6.279;QD=22.89;ReadPosRankSum=0.472;VQSLOD=2.7498;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:93.32:0,93,1628	0/0:8,0:8:24.08:0,24,423	0/0:24,0:24:61.72:0,62,956	0/0:25,0:25:75.25:0,75,1274	0/0:8,0:8:21.07:0,21,366	0/0:17,0:17:48.16:0,48,842	0/0:22,0:22:60.21:0,60,1058	0/0:19,0:19:48.16:0,48,822	0/0:22,0:22:63.22:0,63,1111	1/1:1,6:7:21.06:345,21,0	1/1:1,8:9:27.07:425,27,0	0/0:13,0:13:36.12:0,36,635	0/0:15,0:15:45.14:0,45,758	0/0:19,0:19:51.16:0,51,872	0/0:13,0:13:39.13:0,39,686	0/0:12,0:12:33.10:0,33,550	0/0:23,0:23:66.20:0,66,1133	0/0:13,0:13:33.11:0,33,577	0/0:18,0:18:48.16:0,48,836	0/0:10,0:10:27.08:0,27,447	0/0:20,0:19:51.15:0,51,870	0/0:12,0:12:36.12:0,36,629	0/0:14,0:14:42.14:0,42,740	0/0:36,0:36:99:0,108,1876	0/0:20,0:20:60.21:0,60,1059	0/1:12,1:13:21.89:22,0,511	0/0:21,0:21:63.22:0,63,1101	0/0:4,0:4:12.04:0,12,211
chr10	69208263	.	G	GC	4919.45	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-11.421;DP=651;FS=1.202;HRun=2;HaplotypeScore=75.5262;InbreedingCoeff=0.9979;MQ=72.70;MQ0=0;MQRankSum=-2.592;QD=34.40;ReadPosRankSum=-0.783;VQSLOD=4.7169;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:90.18:0,90,1057	0/0:11,0:11:33.05:0,33,378	0/0:22,0:21:62.67:0,63,736	0/0:22,0:22:54.10:0,54,617	0/0:23,0:23:19.10:0,19,415	0/0:17,0:17:42.08:0,42,490	0/0:25,0:25:72.19:0,72,864	1/1:1,20:21:57.12:726,57,0	0/0:37,0:37:99:0,108,1333	0/0:30,0:30:72.22:0,72,883	0/0:15,0:15:32.74:0,33,356	0/0:28,0:28:78.25:0,78,965	0/0:26,0:26:75.22:0,75,914	0/0:22,0:22:63.18:0,63,768	0/0:31,0:31:90.27:0,90,1103	0/0:32,0:32:81.24:0,81,991	0/0:24,0:24:66.21:0,66,818	0/0:17,0:17:51.16:0,51,632	1/1:2,15:17:42.13:583,42,0	1/1:1,20:23:56.96:685,57,0	1/1:0,27:27:60.20:864,60,0	0/0:18,0:18:33.03:0,33,359	0/0:25,0:25:57.14:0,57,679	0/0:21,0:21:63.16:0,63,753	0/0:26,0:26:59.82:0,60,672	1/1:2,24:26:37.95:896,38,0	1/1:1,21:22:60.20:864,60,0	1/1:0,7:7:21.07:302,21,0
chr10	69209747	.	T	TA	7616.05	PASS	AB=0.917;AC=25;AF=0.446;AN=56;BaseQRankSum=-13.094;DP=614;FS=2.275;HRun=9;HaplotypeScore=58.5568;InbreedingCoeff=0.9261;MQ=71.99;MQ0=0;MQRankSum=0.707;QD=26.26;ReadPosRankSum=0.560;VQSLOD=5.4425;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:53.96:0,54,467	0/0:11,0:11:29.97:0,30,256	0/0:12,0:12:16.44:0,16,104	0/1:10,0:11:31.28:31,0,42	0/0:23,0:23:49.06:0,49,440	0/0:17,0:16:38.99:0,39,339	0/0:14,0:14:38.99:0,39,338	1/1:2,16:18:48.11:521,48,0	0/0:24,0:24:59.93:0,60,511	1/1:4,18:24:59.07:633,59,0	1/1:1,27:29:77.92:814,78,0	0/0:23,0:23:56.98:0,57,495	0/0:25,0:26:56.01:0,56,474	0/0:16,0:16:44.98:0,45,391	0/0:35,0:35:77.93:0,78,671	0/0:30,0:30:77.95:0,78,677	0/0:27,0:27:68.98:0,69,598	1/1:1,23:24:60.16:664,60,0	1/1:3,12:15:36.09:391,36,0	1/1:4,24:28:75.14:805,75,0	1/1:2,19:21:54.15:597,54,0	0/0:28,0:28:74.97:0,75,647	1/1:4,17:22:47.96:512,48,0	1/1:3,33:36:61.29:903,61,0	0/0:18,0:18:41.98:0,42,365	1/1:1,23:24:43.12:692,43,0	1/1:5,20:25:57.15:631,57,0	1/1:1,12:13:39.09:422,39,0
chr10	69210919	.	GCTGT	G	5164.03	PASS	AB=0.591;AC=13;AF=0.232;AN=56;BaseQRankSum=13.676;DP=642;FS=0.000;HRun=0;HaplotypeScore=105.5170;InbreedingCoeff=0.8916;MQ=64.53;MQ0=3;MQRankSum=-2.869;QD=32.28;ReadPosRankSum=0.191;VQSLOD=4.5461;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:51.65:0,52,1241	0/0:13,0:13:33.11:0,33,823	0/0:22,0:19:51:0,51,1146	0/0:17,0:14:24:0,24,475	0/0:25,0:25:66.21:0,66,1583	0/0:21,0:21:54.19:0,54,1273	0/0:17,0:17:42.12:0,42,954	1/1:10,24:34:72.21:1165,72,0	0/0:22,0:22:63.19:0,63,1521	0/0:25,0:25:51.16:0,51,1183	0/0:21,0:21:54.19:0,54,1307	0/0:23,0:23:60.17:0,60,1406	0/0:34,0:34:78.23:0,78,1820	0/0:20,1:21:11.36:0,11,1395	0/0:32,0:32:81.28:0,81,2037	0/0:26,0:26:72.23:0,72,1740	0/0:30,0:30:81.26:0,81,1974	0/0:26,0:26:63.22:0,63,1526	1/1:5,8:13:24.08:409,24,0	1/1:4,18:22:42.14:724,42,0	1/1:0,15:15:21.07:363,21,0	0/0:17,0:17:39.13:0,39,969	0/0:21,0:21:54.19:0,54,1331	0/0:19,0:19:54.19:0,54,1322	0/0:28,0:28:78.27:0,78,1956	0/1:8,18:26:18.53:846,0,19	1/1:2,37:39:78.27:1348,78,0	1/1:4,7:9:18.06:310,18,0
chr10	69212705	.	ATAAAAATTT	A	12396.36	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=14.605;DP=580;FS=8.452;HRun=0;HaplotypeScore=171.3519;InbreedingCoeff=0.9255;MQ=64.15;MQ0=4;MQRankSum=-14.252;QD=50.80;ReadPosRankSum=-0.369;VQSLOD=3.8327;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:69.24:0,69,3034	0/0:11,0:11:30.10:0,30,1330	0/0:33,0:22:54.65:0,55,1527	0/0:23,0:14:39.09:0,39,921	0/0:21,0:21:57.20:0,57,2537	0/0:18,0:18:51.18:0,51,2355	0/0:20,0:20:51.16:0,51,1996	1/1:7,26:33:78.21:1963,78,0	0/0:16,0:16:33.11:0,33,1402	0/0:26,0:26:3.74:0,4,1655	0/1:20,0:20:1.94:2,0,1481	0/0:22,0:22:63.22:0,63,2782	0/0:16,0:16:42.14:0,42,1811	0/0:14,0:14:33.11:0,33,1370	0/0:17,0:17:48.16:0,48,2155	0/0:23,0:23:63.22:0,63,2883	0/0:21,0:21:51.18:0,51,2252	1/1:6,16:22:36.11:986,36,0	1/1:5,13:19:42.14:1130,42,0	1/1:4,25:29:69.24:1721,69,0	1/1:5,12:17:17.40:343,17,0	0/0:12,0:12:36.12:0,36,1546	1/1:6,15:21:36.12:945,36,0	1/1:3,10:13:14.82:367,15,0	0/0:17,0:17:45.15:0,45,1995	1/1:6,24:30:69.23:1885,69,0	1/1:4,29:33:87.30:2523,87,0	1/1:1,6:7:18.06:530,18,0
chr10	69212712	.	TTTTAA	T	5079.08	PASS	AB=0.745;AC=22;AF=0.393;AN=56;BaseQRankSum=16.341;DP=526;FS=4.390;HRun=0;HaplotypeScore=142.5721;InbreedingCoeff=0.8283;MQ=66.89;MQ0=4;MQRankSum=-14.746;QD=22.88;ReadPosRankSum=1.821;VQSLOD=4.7331;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:84.29:0,84,2666	0/0:10,0:10:30.10:0,30,970	0/0:34,0:22:58.43:0,58,1469	0/0:25,0:15:44.77:0,45,949	0/0:20,0:20:60.21:0,60,1920	0/0:17,0:17:51.18:0,51,1694	0/0:19,0:19:57.18:0,57,1734	1/1:26,0:26:70.51:813,71,0	0/0:13,0:13:39.13:0,39,1290	0/1:16,8:24:99:311,0,1341	0/1:13,7:20:99:207,0,1190	0/0:22,0:22:66.23:0,66,2125	0/0:15,0:15:45.15:0,45,1420	0/0:12,0:12:36.12:0,36,1121	0/0:18,0:18:54.19:0,54,1769	0/0:23,0:23:69.24:0,69,2292	0/0:18,0:18:54.19:0,54,1730	1/1:16,0:16:31.45:356,31,0	1/1:14,0:14:36.39:408,36,0	1/1:25,0:25:42.21:573,42,0	1/1:12,0:12:5.78:42,6,0	0/0:14,0:14:42.14:0,42,1332	1/1:15,0:15:28.49:319,28,0	1/1:10,0:10:12.37:122,12,0	0/0:15,0:15:45.15:0,45,1470	1/1:24,0:23:44.79:727,45,0	1/1:29,0:30:84.72:989,85,0	1/1:6,0:6:18.05:212,18,0
chr10	69213597	.	AT	A	2858.74	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=6.555;DP=580;FS=4.496;HRun=13;HaplotypeScore=67.1072;InbreedingCoeff=0.9261;MQ=70.26;MQ0=0;MQRankSum=-0.588;QD=13.17;ReadPosRankSum=2.400;VQSLOD=4.1919;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:51.08:0,51,496	0/0:6,0:6:18.03:0,18,175	0/0:11,0:9:9.01:0,9,82	0/1:13,0:12:3.21:3,0,53	0/0:28,0:28:62.09:0,62,573	0/0:16,1:19:19.12:0,19,357	0/0:16,1:17:11.14:0,11,270	1/1:8,17:25:44.60:326,45,0	0/0:18,0:18:38.03:0,38,361	0/0:9,0:26:61.17:0,61,356	0/0:8,0:24:37.74:0,38,194	0/0:12,1:13:11.12:0,11,261	0/0:23,1:24:35.11:0,35,475	0/0:23,0:23:42.02:0,42,390	0/0:22,2:25:41.85:0,42,530	0/0:26,0:26:63.55:0,64,604	0/0:24,1:26:35.45:0,35,480	1/1:5,11:17:31.84:225,32,0	1/1:6,14:20:44.58:319,45,0	1/1:5,16:21:35.70:262,36,0	1/1:4,17:22:49.74:356,50,0	0/0:29,0:29:66.04:0,66,611	1/1:3,12:16:31.54:224,32,0	1/1:2,21:23:56.67:416,57,0	0/0:23,0:23:48.07:0,48,463	1/1:6,11:18:21.31:226,21,0	1/1:2,20:21:44.67:326,45,0	1/1:1,19:20:53.67:394,54,0
chr10	69216212	.	ATG	A	186.79	PASS	AB=0.951;AC=11;AF=0.229;AN=48;BaseQRankSum=1.696;DP=604;FS=4.160;HRun=0;HaplotypeScore=85.1277;InbreedingCoeff=0.3326;MQ=66.99;MQ0=15;MQRankSum=1.072;QD=1.26;ReadPosRankSum=1.820;VQSLOD=1.3626;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	0/0:6,0:6:3.01:0,3,37	./.	./.	1/1:14,0:16:2.84:14,3,0	0/0:25,0:24:15.03:0,15,199	0/1:17,1:18:25.77:26,0,39	0/0:33,0:30:3.01:0,3,38	0/0:13,2:15:18.03:0,18,241	1/1:32,2:35:2.75:69,3,0	1/1:12,0:15:6.02:64,6,0	0/0:21,0:21:15.03:0,15,195	0/0:18,0:18:18.06:0,18,259	0/0:24,0:23:21.03:0,21,251	0/0:16,0:15:12.02:0,12,156	1/1:12,6:18:11.86:110,12,0	0/0:10,0:9:12.04:0,12,167	0/0:9,0:15:2.68:0,3,11	0/0:20,0:20:4.26:0,4,40	0/0:11,0:11:5.99:0,6,62	0/0:39,0:51:6.89:0,7,68	0/0:23,0:23:12.03:0,12,153	0/0:15,0:15:5.03:0,5,29	0/1:20,1:29:20.41:20,0,99	0/1:14,1:15:20.03:20,0,118	0/0:26,0:31:29.67:0,30,264	0/0:18,0:16:18.87:0,19,181	./.
chr10	69216401	.	GC	G	721.11	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.894;DP=673;FS=0.779;HRun=3;HaplotypeScore=74.5821;InbreedingCoeff=0.9958;MQ=86.56;MQ0=0;MQRankSum=-2.314;QD=32.78;ReadPosRankSum=-0.946;VQSLOD=3.4354;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,123,1828	0/0:7,0:7:21.07:0,21,302	0/0:24,0:25:56.30:0,56,803	0/0:24,0:24:63.11:0,63,797	0/0:18,0:18:48.16:0,48,690	0/0:26,0:26:75.24:0,75,1062	0/0:32,0:32:93.29:0,93,1304	0/0:31,0:31:93.31:0,93,1338	0/0:28,0:28:81.27:0,81,1150	0/0:27,0:27:81.27:0,81,1166	0/0:13,0:13:39.13:0,39,560	0/0:25,0:25:75.25:0,75,1080	0/0:25,0:25:75.23:0,75,1059	0/0:25,0:25:72.23:0,72,1018	0/0:32,0:32:93.23:0,93,1312	0/0:22,0:22:66.22:0,66,949	0/0:32,0:32:93.31:0,93,1339	1/1:0,22:22:66.21:816,66,0	0/0:15,0:15:42.09:0,42,564	0/0:21,0:21:60.18:0,60,825	0/0:29,0:29:87.28:0,87,1235	0/0:25,0:25:72.22:0,72,994	0/0:13,0:13:36.12:0,36,517	0/0:22,0:22:60.20:0,60,861	0/0:27,0:27:81.27:0,81,1166	0/0:25,0:25:75.24:0,75,1047	0/0:20,0:20:60.20:0,60,860	0/0:18,0:18:54.18:0,54,770
chr10	69216734	.	TGG	T	955.11	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.800;DP=690;FS=0.000;HRun=5;HaplotypeScore=95.3468;InbreedingCoeff=0.9037;MQ=91.48;MQ0=0;MQRankSum=-0.673;QD=35.37;ReadPosRankSum=3.866;VQSLOD=2.9852;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,132,2363	0/0:10,0:10:27.06:0,27,456	0/0:35,0:35:99:0,99,1649	0/0:28,0:28:74.25:0,74,1267	0/0:16,0:16:48.16:0,48,867	0/0:16,0:16:48.16:0,48,864	0/0:24,0:24:69.24:0,69,1251	0/0:20,0:20:54.18:0,54,958	0/0:22,0:22:63.22:0,63,1144	0/0:25,0:25:72.21:0,72,1185	0/0:11,0:11:30.08:0,30,491	0/0:36,0:36:99:0,105,1885	0/0:32,0:32:96.31:0,96,1711	0/0:32,0:32:87.30:0,87,1571	0/0:29,0:29:87.30:0,87,1592	0/0:18,0:18:54.19:0,54,978	0/0:38,0:38:99:0,111,1947	1/1:0,27:27:75.25:1050,75,0	0/0:15,0:15:39.13:0,39,712	0/0:19,0:19:54.19:0,54,975	0/0:61,0:61:99:0,172,3057	0/0:16,0:16:48.16:0,48,880	0/0:19,0:19:57.15:0,57,1007	0/0:29,0:29:78.27:0,78,1415	0/0:21,0:21:57.19:0,57,1008	0/0:20,0:20:54.17:0,54,940	0/0:24,0:24:63.22:0,63,1133	0/0:2,0:2:6:0,6,79
chr10	69217081	.	AAC	A	803.72	PASS	AB=0.923;AC=24;AF=0.500;AN=48;BaseQRankSum=-4.512;DP=657;FS=5.327;HRun=0;HaplotypeScore=108.1721;InbreedingCoeff=0.3536;MQ=60.21;MQ0=21;MQRankSum=2.111;QD=2.32;ReadPosRankSum=0.236;VQSLOD=1.9719;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:38:38.94:0,39,363	1/1:8,0:8:0.47:1,0,0	./.	./.	0/0:16,0:16:14.96:0,15,135	0/1:11,6:17:12.95:55,0,13	0/1:32,0:30:1.62:143,0,2	0/0:15,0:14:0:0,0,0	1/1:24,0:22:6.11:49,6,0	0/1:22,0:22:22.06:22,0,92	0/1:16,0:16:30.21:54,0,30	1/1:24,6:30:8.63:95,9,0	1/1:23,0:27:6.03:46,6,0	1/1:28,0:28:15.42:128,15,0	1/1:14,6:19:12.03:126,12,0	0/1:21,7:27:11.50:81,0,12	1/1:20,0:19:9.41:65,9,0	1/1:21,0:22:2.84:14,3,0	0/0:19,0:18:14.92:0,15,124	0/0:17,0:17:23.60:0,24,226	0/0:72,0:72:40.07:0,40,316	./.	./.	0/1:29,0:27:16.41:16,0,337	1/1:24,0:24:8.84:70,9,0	0/0:20,0:18:23.89:0,24,199	0/0:12,0:17:11.31:0,11,84	0/0:2,0:2:2.92:0,3,17
chr10	69217968	.	CGT	C	1721.37	PASS	AB=0.933;AC=33;AF=0.660;AN=50;BaseQRankSum=-2.847;DP=617;FS=5.145;HRun=0;HaplotypeScore=116.4172;InbreedingCoeff=0.2616;MQ=57.15;MQ0=9;MQRankSum=3.274;QD=4.23;ReadPosRankSum=0.801;VQSLOD=2.2540;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/1:6,1:7:23.36:23,0,80	./.	./.	1/1:8,0:14:1.45:4,1,0	1/1:11,1:12:17.71:153,18,0	1/1:27,1:30:22.78:184,23,0	0/0:24,0:23:3.44:0,3,20	1/1:14,5:19:12.02:125,12,0	1/1:22,0:22:0.36:53,0,0	1/1:13,0:12:2.43:21,2,0	1/1:30,5:35:12.27:366,12,0	1/1:7,8:15:8.87:96,9,0	1/1:26,3:29:17.47:236,17,0	0/1:17,1:19:21.74:22,0,296	1/1:10,12:21:9.02:97,9,0	1/1:26,9:35:28.73:235,29,0	0/0:34,0:34:38.54:0,39,319	0/1:17,0:16:12.01:12,0,90	0/1:17,0:16:3.86:4,0,95	0/0:40,0:38:19.13:0,19,186	0/1:12,4:16:4.19:137,0,4	1/1:7,0:7:2.98:21,3,0	0/1:37,0:37:12.55:13,0,30	1/1:11,0:13:10.34:72,10,0	0/0:28,0:28:15.30:0,15,204	0/1:21,1:22:8.33:8,0,117	0/0:11,0:10:6.01:0,6,69
chr10	69218013	.	GTA	G	1927.54	PASS	AB=0.981;AC=28;AF=0.500;AN=56;BaseQRankSum=8.305;DP=659;FS=31.114;HRun=0;HaplotypeScore=121.3020;InbreedingCoeff=-0.2897;MQ=53.09;MQ0=15;MQRankSum=-1.735;QD=3.93;ReadPosRankSum=-2.578;VQSLOD=0.5169;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,1:47:65.78:0,66,517	0/1:8,0:8:2.98:3,0,191	0/0:16,0:4:8.93:0,9,70	0/1:22,0:4:5.14:5,0,9	0/0:22,0:21:8.98:0,9,162	0/1:12,1:13:69.63:70,0,93	0/1:35,0:35:21.71:22,0,441	1/1:2,24:25:68.25:473,68,0	0/1:22,1:23:15.22:15,0,245	1/1:2,22:24:63.27:520,63,0	1/1:0,12:11:5.93:62,6,0	0/1:27,1:27:99:212,0,119	0/1:19,1:20:16.60:17,0,197	0/1:27,1:28:99:118,0,270	0/1:19,1:20:5.92:6,0,427	0/0:32,0:31:7.27:0,7,387	0/1:29,2:30:70.26:70,0,194	0/1:28,0:28:27.27:27,0,103	0/1:10,0:9:20.98:96,0,21	0/1:17,0:17:6.52:58,0,7	0/0:47,0:46:14.01:0,14,83	0/1:23,0:19:26.69:27,0,149	1/1:10,0:9:3.01:46,3,0	1/1:33,6:39:3.87:99,4,0	0/1:24,0:24:14.52:15,0,232	0/1:22,0:22:42.89:105,0,43	0/1:17,0:17:11.47:11,0,48	0/1:11,0:11:16.01:16,0,28
chr10	69218019	.	G	GTC	2878.39	PASS	AB=0.578;AC=17;AF=0.304;AN=56;BaseQRankSum=4.733;DP=676;FS=0.966;HRun=0;HaplotypeScore=123.9620;InbreedingCoeff=0.7085;MQ=56.12;MQ0=13;MQRankSum=-1.973;QD=12.35;ReadPosRankSum=-2.180;VQSLOD=3.2165;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:46:69.22:0,69,1033	0/0:9,0:9:24.08:0,24,365	0/0:20,0:5:14.25:0,14,171	0/0:27,0:8:16.08:0,16,146	0/0:21,0:21:27.08:0,27,390	0/0:13,0:13:33.07:0,33,433	0/0:40,0:40:94.94:0,95,1312	1/1:30,0:29:80.84:1009,81,0	0/0:22,0:22:50.70:0,51,744	0/0:23,0:23:27.21:0,27,324	0/0:11,0:10:5.97:0,6,52	0/0:29,0:28:68.01:0,68,873	0/0:22,0:22:46.91:0,47,656	0/0:27,0:27:69.14:0,69,935	0/0:19,0:19:42.11:0,42,593	0/0:29,0:28:66.21:0,66,985	0/0:32,0:32:80.97:0,81,1050	1/1:9,21:30:17.12:598,17,0	1/1:1,9:9:27.07:358,27,0	0/1:6,9:17:10.53:90,0,11	0/1:8,36:44:37.28:173,0,37	0/0:25,0:21:57.10:0,57,747	1/1:2,7:12:2.68:11,3,0	0/1:11,30:41:0.56:1,0,38	0/0:26,0:26:40.28:0,40,641	1/1:2,16:18:21.68:529,22,0	1/1:1,13:17:11.40:182,11,0	1/1:1,11:12:6:114,6,0
chr10	69218289	.	G	GC	15708.68	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-16.829;DP=714;FS=4.490;HRun=1;HaplotypeScore=65.1550;InbreedingCoeff=0.9978;MQ=80.61;MQ0=0;MQRankSum=-4.720;QD=41.23;ReadPosRankSum=1.242;VQSLOD=5.5200;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,27:27:63.21:944,63,0	0/0:11,0:11:33.08:0,33,409	0/0:20,0:20:54.17:0,54,693	0/0:19,0:19:57.16:0,57,705	1/1:1,31:32:87.29:1292,87,0	0/0:21,0:21:63.20:0,63,817	0/0:23,0:23:66.21:0,66,857	1/1:2,31:33:93.32:1394,93,0	0/0:22,0:22:66.20:0,66,843	1/1:0,38:38:99:1618,111,0	1/1:0,18:18:54.18:809,54,0	0/0:23,0:23:66.21:0,66,856	0/0:37,0:37:99:0,108,1398	0/0:23,0:23:66.20:0,66,842	0/0:23,0:23:69.22:0,69,895	0/0:29,0:29:87.28:0,87,1129	0/0:27,0:27:81.26:0,81,1052	1/1:1,19:19:57.19:854,57,0	1/1:2,17:19:54.18:807,54,0	1/1:0,33:33:99:1482,99,0	1/1:0,17:17:45.15:675,45,0	0/0:27,0:27:78.25:0,78,1006	1/1:3,31:34:84.18:1257,84,0	1/1:0,20:20:57.19:854,57,0	0/0:28,0:28:81.26:0,81,1052	1/1:0,43:43:99:1879,126,0	1/1:3,39:42:99:1619,108,0	1/1:0,5:5:15.05:225,15,0
chr10	69218680	.	AACACACACACACACACACACACACACAC	A	3498.66	PASS	AB=0.669;AC=13;AF=0.241;AN=54;BaseQRankSum=5.421;DP=569;FS=10.778;HRun=0;HaplotypeScore=336.9090;InbreedingCoeff=0.5503;MQ=54.71;MQ0=15;MQRankSum=-3.788;QD=19.12;ReadPosRankSum=-1.071;VQSLOD=0.6763;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:23:23.12:0,23,721	0/0:5,0:6:15.05:0,15,1034	0/0:40,0:19:3.01:0,3,50	0/0:36,0:16:3.01:0,3,39	0/0:22,0:28:24.07:0,24,685	0/0:26,0:26:34.75:0,35,2774	0/0:23,0:22:35.24:0,35,2292	0/0:25,0:25:3.01:0,3,72	0/0:15,0:15:25.64:0,26,1974	0/1:9,0:21:99:412,0,375	0/0:17,0:21:6.02:0,6,84	0/0:16,0:16:26.83:0,27,2172	0/0:12,0:12:18.06:0,18,959	0/0:17,0:16:24.08:0,24,1817	0/0:19,0:22:24.08:0,24,1487	0/0:12,0:14:17.64:0,18,1277	0/0:26,0:30:57.16:0,57,3766	0/1:9,0:18:99:181,0,344	0/0:5,0:6:3.01:0,3,37	0/1:16,11:27:0.55:434,0,1	1/1:26,0:25:2.68:37,3,0	0/0:4,0:4:12.04:0,12,789	1/1:10,3:13:12.03:557,12,0	1/1:22,1:23:14.49:551,14,0	0/0:17,0:16:27.09:0,27,1906	1/1:9,16:24:29.89:701,30,0	1/1:14,14:27:8.28:625,8,0	./.
chr10	69218834	.	TACAGACAGACAG	T	15123.62	PASS	AB=0.667;AC=23;AF=0.411;AN=56;BaseQRankSum=17.646;DP=701;FS=3.036;HRun=0;HaplotypeScore=245.6981;InbreedingCoeff=0.9097;MQ=58.78;MQ0=3;MQRankSum=-13.756;QD=58.17;ReadPosRankSum=-0.605;VQSLOD=4.4462;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,102,5679	0/0:7,0:7:18.06:0,18,1008	0/0:36,0:29:57.18:0,57,2312	0/0:24,0:22:44.81:0,45,1852	0/0:30,0:30:63.22:0,63,3744	0/0:24,0:24:60.21:0,60,3431	0/0:23,0:23:54.19:0,54,2975	1/1:12,18:30:54.13:1369,54,0	0/0:24,0:24:63.22:0,63,3457	1/1:5,15:20:45.15:1405,45,0	1/1:4,25:29:75.26:2404,75,0	0/0:26,0:26:63.22:0,63,3511	0/0:22,0:22:51.18:0,51,2920	0/0:29,0:29:75.22:0,75,4069	0/0:41,0:41:93.32:0,93,5002	0/0:24,0:25:63.69:0,64,3723	0/0:20,0:20:54.16:0,54,2869	0/1:4,4:8:10.37:523,0,10	1/1:5,13:17:39.12:1040,39,0	1/1:4,19:23:54.15:1730,54,0	1/1:10,12:22:12.04:408,12,0	0/0:25,0:25:54.19:0,54,3200	1/1:7,16:23:39.60:1236,40,0	1/1:5,7:12:6.02:213,6,0	0/0:40,0:40:96.30:0,96,5301	1/1:11,29:40:90.29:2886,90,0	1/1:8,20:28:39.13:1378,39,0	1/1:1,6:7:15.05:531,15,0
chr10	69222320	.	CTG	C	986.22	PASS	AB=0.968;AC=25;AF=0.521;AN=48;BaseQRankSum=-1.734;DP=576;FS=11.396;HRun=0;HaplotypeScore=99.0869;InbreedingCoeff=0.0992;MQ=68.02;MQ0=23;MQRankSum=1.687;QD=3.12;ReadPosRankSum=1.718;VQSLOD=1.1512;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:18,0:16:0.02:0,0,0	1/1:5,0:5:3.01:33,3,0	./.	./.	./.	0/1:21,0:20:33.02:87,0,33	1/1:16,2:17:6.29:95,6,0	0/0:28,0:26:0:0,0,1	0/1:20,1:20:19.35:128,0,19	0/0:10,0:9:2.36:0,2,10	./.	0/1:22,2:23:28.56:146,0,29	1/1:10,1:11:14.87:146,15,0	1/1:13,10:23:12.03:132,12,0	0/1:28,0:28:26.04:26,0,204	1/1:14,0:13:2.84:14,3,0	0/1:25,1:26:2.30:201,0,2	1/1:15,0:13:2.58:12,3,0	0/0:28,0:26:17.82:0,18,125	1/1:13,0:13:1.24:3,1,0	0/0:51,0:50:8.93:0,9,64	1/1:14,2:16:0.47:1,0,0	0/1:18,0:16:1.55:2,0,32	0/0:26,0:26:6.85:0,7,36	0/1:25,0:24:80.77:81,0,229	0/0:24,0:23:16.74:0,17,142	0/1:14,0:14:17.62:18,0,18	0/0:5,0:5:3.01:0,3,33
chr10	69222365	.	GTGGT	G	386.35	PASS	AB=0.981;AC=13;AF=0.250;AN=52;BaseQRankSum=1.315;DP=656;FS=0.000;HRun=0;HaplotypeScore=127.3239;InbreedingCoeff=-0.1984;MQ=35.31;MQ0=177;MQRankSum=-1.271;QD=1.38;ReadPosRankSum=0.038;VQSLOD=2.3813;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:45,0:30:12.86:13,0,147	0/0:5,0:3:2.92:0,3,17	./.	./.	0/0:18,0:13:9.03:0,9,148	0/1:33,0:25:29.47:29,0,232	0/0:27,0:18:22.20:0,22,317	0/0:24,0:16:45.53:0,46,511	0/0:30,0:20:19.50:0,19,161	0/1:26,9:24:99:170,0,194	1/1:9,0:9:3.85:85,4,0	0/0:39,0:29:35.14:0,35,337	0/1:23,0:20:16.07:16,0,420	0/0:30,0:24:39.29:0,39,425	0/0:32,0:24:31.03:0,31,507	0/1:19,0:11:1.40:1,0,255	0/0:45,0:31:37.99:0,38,656	0/1:18,0:13:63.40:63,0,139	0/1:21,0:10:37.53:38,0,100	0/0:17,0:11:6.15:0,6,71	0/0:42,0:24:1.92:0,2,117	0/0:14,0:9:5.85:0,6,58	0/1:12,0:9:1.72:2,0,29	0/0:41,0:32:7.77:0,8,161	0/1:20,0:15:25.31:25,0,213	0/1:32,0:23:57.46:57,0,378	0/0:13,0:9:10.28:0,10,93	0/1:12,0:5:23.28:23,0,107
chr10	69222371	.	T	TGTG	1362.51	PASS	AB=0.925;AC=11;AF=0.212;AN=52;BaseQRankSum=2.107;DP=689;FS=22.277;HRun=0;HaplotypeScore=129.8160;InbreedingCoeff=0.0754;MQ=35.73;MQ0=180;MQRankSum=-2.281;QD=5.28;ReadPosRankSum=-3.902;VQSLOD=-0.0605;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:29:15.77:0,16,193	0/0:5,0:3:3.01:0,3,38	./.	./.	0/0:21,0:15:14.57:0,15,218	0/0:33,0:24:16.85:0,17,248	0/0:28,0:20:20.43:0,20,258	0/1:28,0:21:64.77:342,0,65	0/1:30,0:21:52.47:52,0,313	0/0:35,0:23:49.36:0,49,600	0/0:10,0:9:10.83:0,11,130	0/0:40,0:30:22.94:0,23,394	0/0:22,0:19:29.76:0,30,392	0/0:28,0:22:23.37:0,23,363	0/0:34,0:26:39.26:0,39,495	0/0:19,0:11:13.79:0,14,203	0/0:46,0:32:60.21:0,60,761	0/0:19,0:14:31.45:0,31,423	1/1:21,0:11:9.15:276,9,0	0/1:15,0:11:31.61:41,0,32	0/1:52,0:36:51.50:170,0,52	0/0:14,0:9:6.02:0,6,93	1/1:11,1:9:3.89:68,4,0	0/1:29,13:35:69.28:194,0,69	0/0:19,0:14:28.03:0,28,315	0/1:29,1:25:99:189,0,200	0/1:16,0:12:35.22:175,0,35	0/0:12,0:5:8.70:0,9,99
chr10	69223107	.	TAC	T	269.74	PASS	AB=0.909;AC=12;AF=0.250;AN=48;BaseQRankSum=5.471;DP=514;FS=6.776;HRun=0;HaplotypeScore=68.8877;InbreedingCoeff=0.0013;MQ=66.88;MQ0=7;MQRankSum=-0.493;QD=1.37;ReadPosRankSum=0.644;VQSLOD=0.6920;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:25:5.68:28,6,0	0/1:3,1:4:26.22:26,0,32	./.	./.	./.	0/1:17,2:20:40.31:40,0,216	0/0:23,0:22:15.05:0,15,213	0/0:24,0:23:3.01:0,3,37	0/1:16,2:18:40.40:40,0,237	0/0:9,0:9:6.02:0,6,84	0/0:13,0:13:9.01:0,9,95	0/1:26,0:25:11.17:11,0,219	0/0:18,0:17:15.03:0,15,197	0/0:18,0:18:15.05:0,15,215	0/1:21,0:21:7.58:8,0,265	0/1:17,3:19:11.17:11,0,238	0/0:27,0:27:21.07:0,21,301	1/1:11,7:18:18.04:193,18,0	./.	0/0:12,0:12:12.01:0,12,152	0/0:31,0:31:18.06:0,18,265	0/0:21,0:21:18.06:0,18,258	0/0:9,0:9:6.02:0,6,76	0/1:24,2:25:31.39:31,0,343	0/0:12,0:12:6.02:0,6,89	0/0:18,0:18:6.01:0,6,72	0/1:17,2:19:23.20:23,0,79	0/0:5,0:5:9.01:0,9,110
chr10	69224286	.	C	CG	14623.47	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-17.009;DP=790;FS=0.263;HRun=1;HaplotypeScore=75.3671;InbreedingCoeff=0.9995;MQ=74.58;MQ0=0;MQRankSum=-1.054;QD=41.43;ReadPosRankSum=0.329;VQSLOD=5.2016;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,126,1631	0/0:10,0:10:27.09:0,27,351	0/0:16,0:16:44.48:0,44,578	0/0:11,0:11:33.11:0,33,428	0/0:27,0:27:78.25:0,78,1010	0/0:30,0:30:84.27:0,84,1090	0/0:36,0:36:99:0,108,1382	1/1:0,29:29:87.28:1272,87,0	0/0:22,0:22:66.21:0,66,857	1/1:3,35:38:99:1556,108,0	1/1:0,16:16:45.15:673,45,0	0/0:42,0:42:99:0,123,1595	0/0:26,0:26:62.34:0,62,883	0/0:31,0:31:90.26:0,90,1138	0/0:32,0:32:96.31:0,96,1246	0/0:28,0:28:78.23:0,78,996	0/0:36,0:36:99:0,108,1385	1/1:0,26:26:75.25:1124,75,0	1/1:0,26:26:78.25:1131,78,0	1/1:0,26:26:72.24:1077,72,0	1/1:6,49:55:99:2111,141,0	0/0:26,0:26:78.23:0,78,977	1/1:1,17:18:48.16:719,48,0	1/1:0,40:39:99:1662,111,0	0/0:18,0:18:45.13:0,45,571	1/1:1,32:33:96.29:1391,96,0	1/1:1,36:38:99:1548,105,0	1/1:0,8:8:24.08:359,24,0
chr10	69225839	.	C	CTG	11021.28	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-16.751;DP=668;FS=9.971;HRun=0;HaplotypeScore=74.7175;InbreedingCoeff=0.9945;MQ=95.04;MQ0=2;MQRankSum=-2.768;QD=48.98;ReadPosRankSum=1.756;VQSLOD=5.2738;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,111,1615	0/0:7,0:7:21.07:0,21,309	0/0:36,0:36:93.27:0,93,1291	0/0:26,0:26:75.21:0,75,1059	0/0:18,0:18:45.15:0,45,659	0/0:30,0:30:81.25:0,81,1146	0/0:20,0:20:60.20:0,60,884	1/1:3,25:30:84.22:1463,84,0	0/0:20,0:20:60.19:0,60,863	0/0:24,0:24:51.16:0,51,735	0/0:27,0:27:63.21:0,63,926	0/0:22,0:22:66.22:0,66,972	0/0:23,0:23:69.23:0,69,1015	0/0:25,0:25:75.18:0,75,1036	0/0:28,0:28:78.22:0,78,1090	0/0:17,0:17:51.17:0,51,750	0/0:20,0:20:57.19:0,57,839	0/0:18,0:18:54.18:0,54,795	1/1:4,24:28:83.49:1491,83,0	1/1:0,27:27:78.27:1460,78,0	1/1:4,25:31:69.24:1292,69,0	0/0:19,0:19:48.15:0,48,687	1/1:0,20:20:54.16:1011,54,0	1/1:1,23:24:63.22:1180,63,0	0/0:24,0:24:69.21:0,69,980	1/1:1,25:26:34.08:1350,34,0	1/1:4,27:32:84.29:1549,84,0	1/1:2,5:5:12.04:225,12,0
chr10	69227657	.	CA	C	8088.69	PASS	AB=0.525;AC=16;AF=0.286;AN=56;BaseQRankSum=12.745;DP=709;FS=3.481;HRun=1;HaplotypeScore=70.5715;InbreedingCoeff=0.8243;MQ=88.43;MQ0=0;MQRankSum=-0.879;QD=37.10;ReadPosRankSum=-0.270;VQSLOD=5.1348;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:96.29:0,96,1489	0/0:15,0:15:45.14:0,45,696	0/0:27,0:27:69.12:0,69,1060	0/0:25,0:25:64.78:0,65,954	0/0:22,0:22:63.20:0,63,980	0/0:30,0:30:87.25:0,87,1340	0/0:25,0:25:75.26:0,75,1199	1/1:0,33:33:96.31:1317,96,0	0/0:26,0:26:78.25:0,78,1219	0/0:28,0:28:78.26:0,78,1228	0/0:16,0:16:45.15:0,45,715	0/0:33,0:33:99:0,99,1477	0/0:42,0:42:99:0,126,1942	0/0:21,0:21:63.21:0,63,1007	0/0:34,0:34:99:0,102,1626	0/0:19,0:19:57.19:0,57,911	0/0:19,0:19:57.19:0,57,908	0/0:16,0:16:48.16:0,48,762	1/1:0,28:28:84.26:1133,84,0	1/1:0,24:24:69.21:941,69,0	1/1:0,32:32:90.30:1257,90,0	0/0:30,0:30:90.29:0,90,1410	1/1:0,19:19:51.17:712,51,0	0/1:2,19:21:38.69:655,0,39	0/0:31,0:31:90.30:0,90,1405	0/1:2,19:21:32.75:733,0,33	1/1:0,31:31:75.25:1047,75,0	1/1:0,9:9:21.07:293,21,0
chr10	69228627	.	G	GA	4380.13	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-12.928;DP=590;FS=2.108;HRun=9;HaplotypeScore=59.3619;InbreedingCoeff=0.9873;MQ=78.53;MQ0=0;MQRankSum=-1.072;QD=25.92;ReadPosRankSum=0.103;VQSLOD=5.4625;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:50.97:0,51,438	0/0:11,0:11:26.99:0,27,234	0/0:18,0:18:38.78:0,39,323	0/0:10,0:11:17.02:0,17,133	0/0:34,0:34:92.94:0,93,803	0/0:37,0:38:99:0,110,936	0/0:21,0:21:59.99:0,60,520	1/1:4,17:22:27.91:510,28,0	0/0:17,0:17:50.99:0,51,443	0/0:23,0:23:50.99:0,51,443	0/0:22,0:24:65.02:0,65,553	0/0:20,0:20:56.98:0,57,495	0/0:26,0:26:68.97:0,69,595	0/0:22,0:22:62.99:0,63,547	0/0:19,0:19:44.99:0,45,391	0/0:16,0:16:41.97:0,42,364	0/0:32,0:32:89.98:0,90,781	0/0:18,0:18:47.98:0,48,417	1/1:1,14:15:42.11:464,42,0	1/1:3,25:29:25.89:712,26,0	1/1:0,9:9:24.06:265,24,0	0/0:30,0:30:74.95:0,75,647	1/1:4,24:28:40.13:670,40,0	1/1:0,9:9:24.06:258,24,0	0/0:23,1:24:20.78:0,21,410	1/1:2,27:29:75.20:830,75,0	1/1:1,22:23:31.06:571,31,0	1/1:2,3:5:9.02:100,9,0
chr10	69230760	.	TG	T	8700.35	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=18.417;DP=606;FS=0.000;HRun=6;HaplotypeScore=118.4283;InbreedingCoeff=0.9952;MQ=77.93;MQ0=0;MQRankSum=-6.820;QD=28.62;ReadPosRankSum=-0.092;VQSLOD=3.6437;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,33:43:99:1255,117,0	0/0:11,0:11:21.07:0,21,276	0/0:31,0:30:69.03:0,69,822	0/0:21,0:22:52.91:0,53,596	1/1:0,23:23:63.16:677,63,0	0/0:18,0:18:51.14:0,51,639	0/0:17,0:17:48.16:0,48,631	1/1:2,27:29:81.18:856,81,0	0/0:28,0:28:81.26:0,81,1066	1/1:6,18:24:66.17:707,66,0	1/1:4,12:16:45.08:466,45,0	0/0:16,0:16:45.14:0,45,578	0/0:19,0:19:57.16:0,57,720	0/0:18,0:18:45.15:0,45,591	0/0:28,0:28:78.25:0,78,1024	0/0:25,0:25:75.24:0,75,987	0/0:23,0:23:63.19:0,63,815	1/1:2,14:16:42.06:438,42,0	1/1:4,18:22:60.12:632,60,0	1/1:5,18:23:57.14:606,57,0	1/1:3,15:18:42.10:451,42,0	0/0:28,0:28:75.24:0,75,986	1/1:3,12:15:42.06:431,42,0	1/1:3,18:21:54.13:579,54,0	0/0:17,0:17:48.16:0,48,632	1/1:3,16:19:54.11:570,54,0	1/1:5,26:31:84.21:901,84,0	1/1:0,4:4:12.03:129,12,0
chr10	69230766	.	GT	G	1992.17	PASS	AB=0.988;AC=22;AF=0.393;AN=56;BaseQRankSum=19.301;DP=610;FS=1.717;HRun=1;HaplotypeScore=141.3580;InbreedingCoeff=0.5566;MQ=79.60;MQ0=0;MQRankSum=-6.782;QD=6.45;ReadPosRankSum=2.822;VQSLOD=0.8884;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:37,3:40:74.02:397,74,0	0/0:9,0:9:24.06:0,24,344	0/0:34,0:33:72.96:0,73,1124	0/0:22,0:21:48.94:0,49,729	0/1:26,0:26:15.47:114,0,15	0/0:17,0:17:51.16:0,51,754	0/0:17,0:17:51.16:0,51,759	0/1:32,0:32:54.97:79,0,55	0/0:29,0:29:87.27:0,87,1277	0/1:24,2:26:67.07:112,0,67	1/1:14,1:15:29.85:133,30,0	0/0:17,0:17:51.15:0,51,735	0/0:22,0:22:63.17:0,63,889	0/0:16,0:16:48.15:0,48,700	0/0:28,0:28:84.24:0,84,1220	0/0:25,0:25:75.25:0,75,1147	0/0:22,0:22:66.19:0,66,958	0/1:17,0:17:24.31:85,0,24	0/1:21,0:21:3.02:141,0,3	1/1:20,1:21:33.55:258,34,0	1/1:18,1:19:11.25:87,11,0	0/0:26,0:26:75.25:0,75,1146	1/1:13,1:14:33.87:176,34,0	1/1:22,0:22:8.59:159,9,0	0/0:17,0:17:51.16:0,51,751	1/1:18,1:19:17.02:176,17,0	0/1:33,0:33:32.40:231,0,32	1/1:4,0:4:10.71:47,11,0
chr10	69230805	.	T	TCC	4836.06	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=4.150;DP=602;FS=4.187;HRun=7;HaplotypeScore=137.3817;InbreedingCoeff=0.9935;MQ=82.36;MQ0=0;MQRankSum=-6.598;QD=27.48;ReadPosRankSum=-0.056;VQSLOD=3.4666;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:93.28:0,93,1082	0/0:7,0:7:21.05:0,21,234	0/0:24,0:24:53.66:0,54,597	0/0:22,0:22:38.30:0,38,408	0/0:30,0:30:78.17:0,78,893	0/0:20,0:20:54.15:0,54,629	0/0:19,0:19:54.14:0,54,619	1/1:14,10:24:30.09:470,30,0	0/0:21,0:21:60.18:0,60,699	0/0:35,0:35:93.27:0,93,1080	0/0:22,0:22:63.17:0,63,723	0/0:20,0:20:57.15:0,57,653	0/0:25,0:25:72.17:0,72,806	0/0:16,0:16:45.12:0,45,514	0/0:23,0:23:60.13:0,60,675	0/0:28,0:28:78.23:0,78,908	0/0:22,0:22:60.09:0,60,669	0/0:14,0:14:39.11:0,39,454	1/1:5,15:24:52.60:711,53,0	1/1:8,10:19:24.08:383,24,0	1/1:5,16:21:29.84:492,30,0	0/0:24,0:24:69.19:0,69,793	1/1:5,8:14:14.61:216,15,0	1/1:6,15:21:28.91:448,29,0	0/0:21,0:21:54.13:0,54,618	1/1:4,17:21:51.17:835,51,0	1/1:5,22:27:68.99:1064,69,0	1/1:0,5:5:15.01:217,15,0
chr10	69230849	.	AT	A	5472.65	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=10.323;DP=665;FS=3.622;HRun=1;HaplotypeScore=89.6013;InbreedingCoeff=0.9995;MQ=93.08;MQ0=1;MQRankSum=-4.655;QD=40.54;ReadPosRankSum=2.102;VQSLOD=5.3662;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,22:24:72.22:985,72,0	0/0:8,0:8:24.08:0,24,384	0/0:26,0:25:72.23:0,72,1120	0/0:34,0:34:99:0,99,1508	1/1:1,28:29:81.27:1132,81,0	0/0:20,0:20:60.20:0,60,959	0/0:16,0:16:48.16:0,48,767	0/0:31,0:31:93.30:0,93,1444	0/0:24,0:24:72.25:0,72,1151	1/1:0,32:32:96.32:1343,96,0	1/1:0,28:28:81.27:1132,81,0	0/0:26,0:26:75.26:0,75,1198	0/0:25,0:25:75.21:0,75,1148	0/0:19,0:19:57.19:0,57,908	0/0:34,0:33:99:0,99,1560	0/0:29,0:29:87.26:0,87,1309	0/0:21,0:21:63.20:0,63,981	1/1:0,22:22:63.21:881,63,0	0/0:19,0:19:54.17:0,54,841	0/0:21,0:21:60.19:0,60,936	0/0:24,0:24:63.21:0,63,1001	0/0:28,0:28:84.29:0,84,1343	0/0:18,0:18:54.17:0,54,836	0/0:21,0:21:60.17:0,60,931	0/0:20,0:20:60.20:0,60,959	0/0:19,0:19:54.18:0,54,853	0/0:33,0:33:99:0,99,1583	0/0:14,0:14:39.13:0,39,623
chr10	69232612	.	CTGTGTGTT	C	709	PASS	AB=0.858;AC=10;AF=0.179;AN=56;BaseQRankSum=7.079;DP=719;FS=1.002;HRun=0;HaplotypeScore=188.9238;InbreedingCoeff=0.7223;MQ=56.34;MQ0=25;MQRankSum=-5.576;QD=5.63;ReadPosRankSum=-1.837;VQSLOD=2.5546;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:15,12:26:0.42:1,0,0	0/0:8,0:8:21.02:0,21,614	0/0:31,0:12:16.97:0,17,595	0/0:58,0:19:27.86:0,28,730	1/1:5,25:30:0.94:2,1,0	0/0:21,0:21:47.29:0,47,1397	0/0:35,0:35:87.28:0,87,3216	0/0:31,0:30:69.07:0,69,2011	0/0:24,0:24:65.21:0,65,2293	1/1:6,9:15:30.92:697,31,0	0/1:12,6:17:0:0,0,0	0/0:25,0:25:63.16:0,63,2338	0/0:16,0:15:42.12:0,42,1333	0/0:27,0:26:66.75:0,67,1978	0/0:27,0:27:68.93:0,69,2906	0/0:31,0:31:78.27:0,78,2852	0/0:27,0:27:72.10:0,72,2805	1/1:6,1:6:8.95:123,9,0	0/0:15,0:15:37.31:0,37,1007	0/0:24,0:24:63.20:0,63,2162	0/0:39,0:39:90.11:0,90,3083	0/0:22,0:22:41.23:0,41,1550	0/0:21,0:21:54.16:0,54,2116	0/0:42,0:42:92.56:0,93,3505	0/0:26,0:26:53.77:0,54,2016	0/1:28,1:29:4.49:4,0,2689	0/0:28,0:28:72.04:0,72,2588	0/0:14,0:13:36.12:0,36,1555
chr10	69232638	.	GTGTGCATGCGCATGCA	G	1981.39	PASS	AB=0.758;AC=10;AF=0.179;AN=56;BaseQRankSum=8.180;DP=656;FS=2.028;HRun=0;HaplotypeScore=269.5440;InbreedingCoeff=0.6933;MQ=60.34;MQ0=5;MQRankSum=-6.819;QD=17.23;ReadPosRankSum=-1.455;VQSLOD=2.4038;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:7,18:25:0:0,0,0	0/0:9,0:9:23.61:0,24,1538	0/0:18,0:10:17.84:0,18,256	0/0:25,0:15:11.79:0,12,194	1/1:9,14:23:1.83:4,2,0	0/0:18,0:18:51.17:0,51,3543	0/0:29,0:29:81.24:0,81,4247	0/0:32,0:32:81.28:0,81,4352	0/0:19,0:19:42.14:0,42,2624	1/1:4,11:15:39.13:1497,39,0	1/1:2,13:14:0.47:1,0,0	0/0:33,0:33:87.30:0,87,6094	0/0:17,0:16:39.13:0,39,2747	0/0:24,0:24:60.19:0,60,3921	0/0:36,0:36:80.79:0,81,5422	0/0:25,0:25:57.18:0,57,3606	0/0:27,0:27:75.23:0,75,4202	1/1:0,8:8:9.03:413,9,0	0/0:17,0:17:39.13:0,39,2243	0/0:25,0:25:69.24:0,69,4607	0/0:35,0:35:76.98:0,77,5055	0/0:19,0:19:54.19:0,54,4138	0/0:22,0:22:47.19:0,47,2964	0/0:42,0:42:94.98:0,95,4963	0/0:23,0:23:51.17:0,51,3627	0/1:27,2:29:99:193,0,5201	0/0:33,0:33:87.16:0,87,5511	0/0:13,0:12:36.12:0,36,2301
chr10	69235495	.	TATGATGATAATG	T	1884.09	PASS	AB=0.994;AC=11;AF=0.196;AN=56;BaseQRankSum=11.626;DP=672;FS=0.465;HRun=0;HaplotypeScore=242.8523;InbreedingCoeff=0.1755;MQ=62.76;MQ0=1;MQRankSum=-5.663;QD=8.02;ReadPosRankSum=-1.071;VQSLOD=2.4169;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,27:27:24.08:851,24,0	0/0:8,0:8:20.92:0,21,396	0/0:29,0:25:53.57:0,54,583	0/0:21,0:15:34.24:0,34,361	1/1:1,21:22:18.06:461,18,0	0/0:17,0:17:51.09:0,51,1800	0/0:15,0:15:39.07:0,39,1284	0/0:31,0:31:63.07:0,63,643	0/0:29,0:29:87.19:0,87,3832	0/1:30,0:30:99:273,0,891	0/0:24,0:24:6.02:0,6,168	0/0:28,0:28:72.02:0,72,2585	0/0:26,0:26:72.14:0,72,2645	0/0:31,0:31:81.14:0,81,1756	0/0:34,0:33:93.26:0,93,3961	0/0:26,0:26:72.19:0,72,3011	0/0:28,0:28:74.82:0,75,2742	0/1:23,0:24:29.44:29,0,140	0/1:12,0:12:9.24:9,0,188	0/1:26,0:26:51.94:52,0,220	0/0:22,0:22:24.87:0,25,287	0/0:19,0:19:54.05:0,54,2080	0/1:22,0:22:99:104,0,201	0/0:20,0:20:50.60:0,51,426	0/0:24,0:24:66.58:0,67,2043	0/1:29,0:29:36.46:36,0,480	0/1:43,0:43:99:225,0,465	0/0:5,0:5:1.61:0,2,83
chr10	69235498	.	GATGATA	G	1446.46	PASS	AB=0.933;AC=13;AF=0.232;AN=56;BaseQRankSum=12.237;DP=666;FS=2.679;HRun=0;HaplotypeScore=172.2290;InbreedingCoeff=0.2863;MQ=62.33;MQ0=1;MQRankSum=-4.992;QD=6.03;ReadPosRankSum=0.337;VQSLOD=2.8548;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:27:24.08:372,24,0	0/0:9,0:9:23.91:0,24,335	0/0:28,0:24:51.11:0,51,578	0/0:20,0:14:34.62:0,35,363	1/1:21,0:21:15.05:123,15,0	0/0:18,0:18:54.09:0,54,1144	0/0:17,0:17:45.07:0,45,931	0/0:27,0:27:63.05:0,63,578	0/0:29,0:29:87.19:0,87,2312	1/1:31,0:31:24.29:411,24,0	0/0:23,0:23:4.07:0,4,11	0/0:29,0:29:75.02:0,75,1622	0/0:26,0:26:72.07:0,72,1476	0/0:30,0:30:80.75:0,81,789	0/0:34,0:33:93.22:0,93,2294	0/0:26,0:26:75.17:0,75,1731	0/0:27,0:27:74.91:0,75,1540	0/1:3,21:24:39.12:98,0,39	0/1:10,0:10:31.34:31,0,153	0/1:25,0:25:99:133,0,219	0/0:20,0:20:12.77:0,13,235	0/0:20,0:20:57.04:0,57,1290	0/1:23,0:23:99:108,0,198	0/0:19,0:19:50.58:0,51,384	0/0:24,0:24:66.55:0,67,1170	0/1:31,0:31:99:113,0,351	0/1:43,0:43:99:219,0,419	0/1:5,0:5:7.73:8,0,81
chr10	69235501	.	GATA	G	1331.06	PASS	AB=1.000;AC=10;AF=0.179;AN=56;BaseQRankSum=12.317;DP=659;FS=17.258;HRun=0;HaplotypeScore=137.7357;InbreedingCoeff=0.7322;MQ=62.48;MQ0=1;MQRankSum=-3.419;QD=8.64;ReadPosRankSum=1.941;VQSLOD=2.1395;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:27:23.97:214,24,0	0/0:8,0:8:23.91:0,24,260	0/0:27,0:23:51.58:0,52,580	0/0:20,0:14:34.31:0,34,358	1/1:21,0:21:11.77:79,12,0	0/0:18,0:18:54.04:0,54,760	0/0:16,0:16:48.05:0,48,651	0/0:23,0:23:63.05:0,63,578	0/0:31,0:31:93.19:0,93,1628	1/1:0,30:30:87.03:961,87,0	1/1:0,23:23:5.86:102,6,0	0/0:28,0:28:77.98:0,78,1139	0/0:25,0:25:72.05:0,72,1020	0/1:29,0:29:75.66:76,0,339	0/0:31,0:30:93.19:0,93,1564	0/0:26,0:26:64.23:0,64,1158	0/0:27,0:27:77:0,77,1076	0/1:24,0:24:2.73:60,0,3	0/0:10,0:10:21.27:0,21,184	0/0:25,0:25:20.30:0,20,253	0/0:18,0:18:32.57:0,33,256	0/0:20,0:20:57.03:0,57,870	0/0:24,0:24:4.84:0,5,224	0/0:20,0:20:50.58:0,51,384	0/0:27,0:27:66.67:0,67,936	0/0:32,0:32:22.24:0,22,422	0/0:44,0:44:45.35:0,45,493	0/0:5,0:5:11.08:0,11,94
chr10	69235504	.	AATGATGATG	A	4113.33	PASS	AC=18;AF=0.360;AN=50;BaseQRankSum=8.995;DP=654;FS=2.498;HRun=0;HaplotypeScore=195.2543;InbreedingCoeff=0.8485;MQ=61.59;MQ0=1;MQRankSum=-7.780;QD=20.46;ReadPosRankSum=-2.326;VQSLOD=2.9879;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:27:24.08:451,24,0	0/0:8,0:8:6.02:0,6,259	0/0:25,0:21:0:0,0,0	./.	1/1:21,0:21:16.18:160,16,0	0/0:19,0:19:33.10:0,33,1255	0/0:18,0:18:36.11:0,36,1212	./.	0/0:31,0:31:69.22:0,69,2879	0/0:30,0:30:36.12:0,36,835	0/0:23,0:23:6.02:0,6,140	0/0:28,0:28:54.19:0,54,2021	0/0:25,0:25:45.15:0,45,1696	0/0:16,0:28:39.13:0,39,788	0/0:32,0:31:66.21:0,66,2651	0/0:28,0:28:63.18:0,63,2193	0/0:27,0:27:51.13:0,51,1836	0/0:24,0:24:5.38:0,5,116	1/1:7,3:10:9.03:244,9,0	1/1:9,13:22:24.08:652,24,0	1/1:13,5:18:3.01:82,3,0	0/0:20,0:20:36.12:0,36,1462	1/1:10,11:22:21.06:537,21,0	./.	0/0:26,0:27:45.15:0,45,1529	1/1:16,17:33:41.99:802,42,0	1/1:22,19:43:42.14:1104,42,0	1/1:4,1:5:3.01:81,3,0
chr10	69236160	.	A	AGAATGAATGAATGAAT	21686.85	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=6.057;DP=723;FS=0.363;HRun=0;HaplotypeScore=293.4346;InbreedingCoeff=0.9558;MQ=69.14;MQ0=0;MQRankSum=-13.034;QD=59.74;ReadPosRankSum=-5.522;VQSLOD=3.1168;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:35:33.11:1355,33,0	0/0:11,0:11:21.07:0,21,787	0/0:19,0:18:24.05:0,24,558	0/0:24,0:23:16.97:0,17,476	1/1:11,0:26:33.04:926,33,0	0/0:28,0:28:63.19:0,63,2434	0/0:19,0:19:45.05:0,45,1080	1/1:45,0:43:69.14:2630,69,0	0/0:40,0:40:90.28:0,90,3554	1/1:17,0:36:75.23:2810,75,0	1/1:12,0:15:27.09:874,27,0	0/0:33,0:33:81.27:0,81,3351	0/0:23,0:23:39.13:0,39,1646	0/0:32,0:32:63.18:0,63,2278	0/0:30,0:30:54.19:0,54,2250	0/0:35,0:35:90.30:0,90,3497	0/0:21,0:21:42.14:0,42,1633	1/1:6,0:10:15.05:629,15,0	1/1:14,9:23:42.14:1914,42,0	1/1:15,11:29:57.09:2860,57,0	1/1:10,8:18:3.01:228,3,0	0/0:18,0:18:30.09:0,30,1019	1/1:10,15:27:23.69:1655,24,0	1/1:9,8:17:6.02:455,6,0	0/0:26,0:26:60.19:0,60,2430	1/1:23,19:43:77.06:3230,77,0	1/1:8,19:31:21.07:1240,21,0	1/1:8,0:8:21.04:881,21,0
chr10	69236863	.	GT	G	10141.75	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=17.743;DP=692;FS=0.912;HRun=4;HaplotypeScore=83.9391;InbreedingCoeff=0.9958;MQ=90.98;MQ0=0;MQRankSum=-4.882;QD=31.01;ReadPosRankSum=2.278;VQSLOD=5.2953;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,37:37:99:1260,105,0	0/0:16,0:16:48.16:0,48,661	0/0:27,0:27:75.23:0,75,1028	0/0:28,0:28:81.20:0,81,1055	1/1:0,27:27:72.22:864,72,0	0/0:15,0:15:42.14:0,42,587	0/0:22,0:22:66.21:0,66,908	1/1:7,24:31:72.19:840,72,0	0/0:29,0:29:84.28:0,84,1175	1/1:0,25:25:68.33:826,68,0	1/1:0,20:20:57.17:683,57,0	0/0:26,0:26:78.26:0,78,1092	0/0:35,0:35:99:0,102,1406	0/0:32,0:32:87.20:0,87,1157	0/0:29,0:29:81.27:0,81,1134	0/0:32,0:32:93.30:0,93,1287	0/0:34,0:34:99:0,99,1386	1/1:2,15:17:39.12:468,39,0	1/1:1,25:26:75.23:894,75,0	1/1:2,19:21:51.15:612,51,0	1/1:2,25:27:57.17:684,57,0	0/0:22,0:22:63.19:0,63,843	1/1:2,14:16:39.12:465,39,0	1/1:0,21:21:60.18:720,60,0	0/0:18,0:18:48.15:0,48,654	1/1:1,31:32:93.22:1075,93,0	1/1:0,21:21:51.16:609,51,0	1/1:2,4:6:12.04:144,12,0
chr10	69237023	.	T	TG	2490.24	PASS	AB=0.800;AC=18;AF=0.321;AN=56;BaseQRankSum=-7.666;DP=537;FS=0.921;HRun=9;HaplotypeScore=72.4710;InbreedingCoeff=0.8312;MQ=84.02;MQ0=0;MQRankSum=-0.706;QD=15.09;ReadPosRankSum=-1.353;VQSLOD=3.6087;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:45.44:0,45,387	0/0:8,0:8:23.99:0,24,207	0/0:17,1:18:41.97:0,42,360	0/0:20,0:17:35.96:0,36,312	0/1:19,1:20:13.37:13,0,291	0/0:22,0:22:59.98:0,60,521	0/0:21,0:21:44.96:0,45,391	1/1:6,10:16:27.91:279,28,0	0/0:24,0:24:59.96:0,60,520	0/0:2,0:27:43.29:0,43,129	0/0:3,0:24:36.02:0,36,105	0/0:19,0:19:44.96:0,45,386	0/0:24,0:24:56.96:0,57,489	0/0:18,0:18:44.95:0,45,385	0/0:26,0:26:47.96:0,48,416	0/0:24,1:25:29.76:0,30,482	0/0:16,0:16:35.98:0,36,312	0/0:1,0:15:26.48:0,26,78	1/1:4,8:12:4.38:223,4,0	1/1:8,11:19:33.06:347,33,0	1/1:3,6:9:15.04:166,15,0	0/0:23,0:23:59.98:0,60,520	0/1:5,6:11:4.96:178,0,5	1/1:5,19:24:42.11:465,42,0	0/0:19,0:19:38.98:0,39,338	1/1:7,13:22:28.67:359,29,0	1/1:7,18:25:44.96:498,45,0	1/1:0,6:6:15.04:166,15,0
chr10	69237069	.	AAGAGAGAGAGAG	A	228.23	PASS	AB=0.929;AC=10;AF=0.185;AN=54;BaseQRankSum=3.712;DP=608;FS=26.833;HRun=0;HaplotypeScore=186.9255;InbreedingCoeff=0.1003;MQ=64.55;MQ0=23;MQRankSum=-1.323;QD=1.76;ReadPosRankSum=0.664;VQSLOD=0.9872;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:19:18.06:0,18,328	0/0:7,0:6:3.01:0,3,64	0/0:61,0:23:1.77:0,2,4	./.	0/0:11,0:11:9.02:0,9,120	0/0:23,0:22:27.08:0,27,543	0/0:19,0:18:15.05:0,15,244	0/0:26,0:25:3.48:0,3,37	0/0:13,0:13:3.01:0,3,35	0/0:21,0:18:15.05:0,15,438	0/0:21,0:20:12:0,12,216	1/1:14,9:23:5.95:120,6,0	0/0:21,0:22:18.06:0,18,432	0/0:18,0:18:12.04:0,12,273	0/0:15,0:21:15.05:0,15,458	0/1:20,0:23:10.61:11,0,654	0/0:18,0:16:21.54:0,22,510	0/0:22,0:22:34.46:0,34,734	0/0:14,0:14:4.81:0,5,16	0/1:13,0:13:55.14:90,0,55	1/1:7,0:7:3.01:40,3,0	0/0:24,0:24:15.05:0,15,322	0/1:11,0:15:27.90:28,0,122	0/0:19,0:20:17.94:0,18,227	0/0:20,0:20:21.07:0,21,486	0/1:15,0:15:33.70:34,0,115	0/1:23,0:22:34.96:35,0,36	0/1:9,0:9:4.43:4,0,28
chr10	69237630	.	G	GTGTT	20411.45	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=-15.778;DP=678;FS=5.698;HRun=0;HaplotypeScore=100.0273;InbreedingCoeff=0.9596;MQ=79.95;MQ0=0;MQRankSum=-4.972;QD=52.20;ReadPosRankSum=-1.191;VQSLOD=5.6961;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:9,38:48:93.27:2183,93,0	0/0:10,0:10:27.08:0,27,460	0/0:23,0:23:49.45:0,49,795	0/1:24,0:23:0.82:1,0,385	1/1:3,22:25:57.07:1265,57,0	0/0:26,0:26:72.23:0,72,1278	0/0:28,0:28:81.28:0,81,1459	1/1:12,28:40:84.26:1902,84,0	0/0:20,0:20:57.18:0,57,1000	1/1:5,16:20:48.16:1249,48,0	1/1:2,16:18:45.15:1176,45,0	0/0:30,0:30:87.27:0,87,1514	0/0:24,0:24:69.24:0,69,1246	0/0:20,0:20:57.14:0,57,944	0/0:18,0:18:48.16:0,48,872	0/0:25,0:25:75.24:0,75,1317	0/0:14,0:14:39.13:0,39,702	1/1:1,7:8:18.06:466,18,0	1/1:5,9:17:36.03:741,36,0	1/1:2,26:29:75.22:1843,75,0	1/1:5,34:40:87.77:2240,88,0	0/0:26,0:26:75.21:0,75,1316	1/1:4,24:29:70.12:1766,70,0	1/1:2,19:22:48.16:1255,48,0	0/0:23,0:23:66.20:0,66,1140	1/1:6,20:27:60.20:1499,60,0	1/1:3,24:27:69.24:1804,69,0	1/1:0,15:16:39.13:1020,39,0
chr10	69239618	.	A	AT	4734.48	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=14.625;DP=663;FS=10.030;HRun=3;HaplotypeScore=73.2301;InbreedingCoeff=0.9963;MQ=79.43;MQ0=0;MQRankSum=-2.428;QD=35.60;ReadPosRankSum=3.122;VQSLOD=5.1340;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,36:37:96.31:1298,96,0	0/0:14,0:14:42.11:0,42,492	0/0:25,0:25:66.64:0,67,791	0/0:18,0:17:36.07:0,36,400	1/1:0,24:24:72.20:966,72,0	0/0:22,0:22:63.19:0,63,755	0/0:26,0:26:72.20:0,72,848	0/0:32,0:32:93.28:0,93,1105	0/0:16,0:16:42.12:0,42,493	1/1:3,23:26:69.22:926,69,0	1/1:2,20:22:60.20:823,60,0	0/0:25,0:25:72.21:0,72,852	0/0:25,0:25:69.19:0,69,804	0/0:22,0:22:60.15:0,60,686	0/0:16,0:16:42.13:0,42,504	0/0:19,0:19:45.14:0,45,539	0/0:31,0:31:90.28:0,90,1079	1/1:1,23:24:54.15:722,54,0	0/0:16,0:15:42.12:0,42,496	0/0:22,0:22:60.18:0,60,719	0/0:24,0:24:66.18:0,66,777	0/0:35,0:35:99:0,99,1177	0/0:24,0:24:69.19:0,69,812	0/0:27,0:27:78.24:0,78,936	0/0:23,0:23:63.19:0,63,756	0/0:35,0:35:99:0,102,1206	0/0:28,0:28:81.23:0,81,959	0/0:5,0:5:15.05:0,15,180
chr10	69240067	.	GAC	G	109.98	PASS	AB=0.952;AC=13;AF=0.250;AN=52;BaseQRankSum=5.353;DP=671;FS=6.532;HRun=0;HaplotypeScore=152.7720;InbreedingCoeff=0.3650;MQ=53.29;MQ0=10;MQRankSum=-2.939;QD=0.67;ReadPosRankSum=1.042;VQSLOD=2.2751;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:50,1:51:22.80:0,23,821	0/0:7,0:7:17.70:0,18,190	0/0:18,0:13:2.97:0,3,20	0/0:20,0:12:6.02:0,6,84	0/1:7,1:8:5.70:30,0,6	0/0:25,0:25:45.13:0,45,677	0/0:40,0:40:83.58:0,84,1204	0/0:36,1:36:34.04:0,34,476	0/0:28,0:28:52.03:0,52,835	0/0:21,0:20:37.20:0,37,317	0/0:10,0:9:15.04:0,15,170	0/0:32,0:32:11.16:0,11,505	0/0:23,0:23:9.61:0,10,558	0/0:27,0:26:48.16:0,48,746	0/0:23,0:22:45.15:0,45,701	0/0:26,0:26:27.36:0,27,811	0/0:35,0:35:81.18:0,81,1157	0/0:33,0:33:68.58:0,69,601	0/1:30,1:29:38.25:38,0,69	./.	./.	0/1:18,0:17:5.86:6,0,381	1/1:9,0:11:2.22:7,2,0	1/1:30,0:27:5.85:46,6,0	0/1:17,1:18:2.87:3,0,415	0/1:20,0:21:22.68:23,0,107	1/1:16,1:17:13.66:87,14,0	1/1:7,0:7:2.30:13,2,0
chr10	69240069	.	C	CAG	1830.40	PASS	AB=0.983;AC=21;AF=0.375;AN=56;BaseQRankSum=7.475;DP=663;FS=3.501;HRun=0;HaplotypeScore=147.8915;InbreedingCoeff=0.4229;MQ=51.89;MQ0=14;MQRankSum=-3.027;QD=5.61;ReadPosRankSum=-3.557;VQSLOD=2.7703;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:51,0:51:69.85:70,0,233	0/0:7,0:7:17.70:0,18,190	0/0:16,0:11:24.02:0,24,224	0/0:18,0:10:23.18:0,23,282	1/1:8,0:8:0.13:52,0,0	0/0:26,0:26:60.10:0,60,784	0/0:38,0:38:99:0,108,1418	0/1:36,0:34:99:208,0,203	0/0:27,0:27:81.08:0,81,1047	0/1:21,0:20:86.66:93,0,87	0/1:10,0:9:32.75:33,0,35	0/0:31,0:31:73.68:0,74,809	0/0:25,0:25:30.54:0,31,712	0/0:27,0:26:75.11:0,75,936	0/0:24,0:23:56.81:0,57,761	0/0:26,0:25:71.95:0,72,950	0/0:35,0:35:96.08:0,96,1260	0/1:32,2:34:99:218,0,168	0/1:27,0:27:8.56:311,0,9	1/1:19,0:19:11.99:101,12,0	1/1:31,2:27:20.59:166,21,0	0/0:19,0:17:41.86:0,42,511	1/1:10,0:10:11.98:98,12,0	1/1:28,4:27:13.97:108,14,0	0/0:18,0:18:47.68:0,48,563	0/1:20,0:20:6.67:292,0,7	1/1:16,0:16:29.83:210,30,0	1/1:7,0:7:8.60:63,9,0
chr10	69240081	.	CACACACAG	C	1452.96	PASS	AB=0.917;AC=14;AF=0.250;AN=56;BaseQRankSum=8.777;DP=624;FS=0.000;HRun=0;HaplotypeScore=204.8256;InbreedingCoeff=0.4837;MQ=49.64;MQ0=18;MQRankSum=-6.683;QD=7.61;ReadPosRankSum=0.067;VQSLOD=2.4687;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:55:99:0,117,2269	0/0:9,0:9:17.96:0,18,250	0/1:7,0:5:0:0,0,0	0/0:11,0:4:5.93:0,6,54	0/0:10,0:10:14.81:0,15,159	0/0:29,0:29:54.08:0,54,1311	0/0:37,0:37:99:0,100,2089	0/1:35,0:32:11.31:11,0,283	0/0:23,0:23:60.91:0,61,1709	0/0:22,0:19:44.85:0,45,701	0/0:12,0:11:24.04:0,24,416	0/0:26,0:26:49.16:0,49,1045	0/0:25,0:25:57.16:0,57,1454	0/0:22,0:21:33.02:0,33,1684	0/0:25,0:24:66.66:0,67,1803	0/0:27,0:26:68.64:0,69,1479	0/0:33,0:33:78.14:0,78,2053	0/0:33,0:33:64.44:0,64,1466	0/1:20,2:20:5.20:387,0,5	1/1:16,1:17:3.01:48,3,0	0/1:31,1:23:0.26:0,0,1	0/0:21,0:19:42.11:0,42,1013	1/1:10,0:9:2.99:24,3,0	1/1:29,0:25:6.86:120,7,0	0/0:13,0:13:33.08:0,33,829	0/1:18,2:20:99:487,0,186	0/1:7,5:12:3.56:377,0,4	1/1:6,1:7:7.13:146,7,0
chr10	69240103	.	CAG	C	409.91	PASS	AB=0.968;AC=16;AF=0.286;AN=56;BaseQRankSum=10.176;DP=580;FS=2.097;HRun=0;HaplotypeScore=138.0630;InbreedingCoeff=0.5314;MQ=49.60;MQ0=23;MQRankSum=-6.392;QD=2.36;ReadPosRankSum=-2.025;VQSLOD=2.3921;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:89.55:0,90,1318	0/0:7,0:7:8.27:0,8,218	0/0:14,0:7:4.21:0,4,100	0/1:13,0:7:8.89:9,0,42	0/0:12,0:12:21.01:0,21,310	0/0:25,0:25:57:0,57,739	0/0:29,0:29:48.06:0,48,984	0/1:23,2:22:99:166,0,108	0/0:19,0:19:25.05:0,25,639	0/0:21,0:17:34.19:0,34,441	0/0:13,0:12:12.91:0,13,255	0/0:22,0:21:26.76:0,27,662	0/0:24,0:24:60.15:0,60,993	0/0:24,0:23:55.31:0,55,885	0/0:25,0:25:38.47:0,38,924	0/0:24,0:23:68.99:0,69,978	0/0:31,0:31:53.27:0,53,1146	0/0:28,0:28:42.10:0,42,780	0/1:15,0:14:7.80:105,0,8	1/1:13,0:13:4.23:16,4,0	1/1:32,1:23:9.30:38,9,0	0/0:23,0:21:41.44:0,41,661	1/1:6,0:5:4.07:13,4,0	1/1:29,2:26:12.38:54,12,0	0/0:14,0:14:38.84:0,39,537	0/1:16,1:16:55.66:100,0,56	1/1:16,0:15:8.83:64,9,0	1/1:5,0:5:6.07:18,6,0
chr10	69240105	.	GAC	G	992.29	PASS	AB=0.957;AC=20;AF=0.357;AN=56;BaseQRankSum=7.567;DP=584;FS=19.196;HRun=0;HaplotypeScore=134.5197;InbreedingCoeff=0.6239;MQ=49.81;MQ0=25;MQRankSum=-5.937;QD=4.37;ReadPosRankSum=-2.174;VQSLOD=1.3712;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:81.96:0,82,884	0/0:7,0:7:20.70:0,21,262	0/1:13,1:6:18.39:18,0,157	0/0:11,0:6:17.84:0,18,177	0/0:12,0:12:21.06:0,21,250	0/0:25,0:24:48.09:0,48,648	0/1:27,0:27:0.24:0,0,702	1/1:25,0:22:26.11:165,26,0	0/0:18,2:20:2.69:0,3,434	0/0:20,0:16:33.53:0,34,395	0/0:15,0:14:18.99:0,19,183	0/0:22,0:21:41.32:0,41,530	0/0:25,0:25:62.75:0,63,869	0/0:24,0:23:55.60:0,56,766	0/1:25,0:25:37.93:38,0,645	0/0:24,0:23:54.18:0,54,848	0/0:29,4:33:38.28:0,38,1027	0/0:28,0:28:32.31:0,32,485	1/1:9,4:13:20.99:200,21,0	1/1:14,0:13:5.97:49,6,0	1/1:34,1:24:10.41:98,10,0	0/0:25,0:23:5.80:0,6,657	1/1:5,1:5:6.01:60,6,0	1/1:27,1:25:15.27:152,15,0	0/0:15,0:15:30.08:0,30,434	0/1:15,2:16:21.11:119,0,21	1/1:16,0:15:27.82:232,28,0	1/1:3,0:5:7.55:54,8,0
chr10	69240130	.	AG	A	1193.75	PASS	AB=0.969;AC=14;AF=0.250;AN=56;BaseQRankSum=10.672;DP=626;FS=1.474;HRun=1;HaplotypeScore=130.2303;InbreedingCoeff=-0.0372;MQ=60.99;MQ0=15;MQRankSum=-2.721;QD=4.52;ReadPosRankSum=-1.280;VQSLOD=-0.2304;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:44,2:45:25.52:325,0,26	0/0:10,0:10:27.09:0,27,421	0/0:30,0:20:60.20:0,60,866	0/0:21,0:16:48.15:0,48,695	0/1:18,1:14:16.16:123,0,16	0/0:24,0:23:57.18:0,57,863	0/0:26,0:26:78.26:0,78,1190	0/0:27,0:27:22.17:0,22,461	0/0:17,0:17:48.15:0,48,738	1/1:19,4:18:7.91:279,8,0	0/1:13,4:17:0.73:237,0,1	0/0:34,0:33:90.28:0,90,1365	0/0:26,0:26:69.23:0,69,1052	0/0:21,0:21:63.21:0,63,985	0/0:29,0:29:87.28:0,87,1329	0/0:22,0:22:62.89:0,63,988	0/0:33,0:33:90.30:0,90,1371	0/1:19,1:21:32.85:87,0,33	0/1:19,0:18:3.43:3,0,237	0/1:13,0:12:7.20:31,0,7	0/1:24,0:19:11.26:34,0,11	0/0:28,0:28:78.24:0,78,1157	0/1:9,0:9:15.93:16,0,20	0/1:33,0:28:19.31:19,0,74	0/0:14,0:14:42.14:0,42,639	0/1:17,0:16:46.17:46,0,68	0/1:17,0:15:20.20:119,0,20	0/1:6,0:6:15.29:31,0,15
chr10	69240131	.	GA	G	2225.65	PASS	AB=0.837;AC=25;AF=0.446;AN=56;BaseQRankSum=15.136;DP=632;FS=19.740;HRun=1;HaplotypeScore=128.5304;InbreedingCoeff=0.7378;MQ=61.18;MQ0=15;MQRankSum=-3.349;QD=7.65;ReadPosRankSum=1.863;VQSLOD=-0.3276;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:45,0:44:13.80:172,14,0	0/0:9,0:9:27.08:0,27,369	0/0:30,0:20:59.86:0,60,672	0/0:21,0:16:47.99:0,48,580	1/1:19,0:14:21.60:82,22,0	0/0:26,0:25:60.11:0,60,764	0/0:26,0:26:78.07:0,78,994	0/1:17,10:27:99:229,0,113	0/0:16,0:16:48:0,48,600	0/1:23,0:18:21.41:70,0,21	1/1:17,0:17:3.27:78,3,0	0/0:33,0:32:89.93:0,90,1162	0/0:26,0:26:68.51:0,69,845	0/0:24,0:24:69.15:0,69,889	0/0:29,0:29:87.02:0,87,1112	0/0:25,1:26:72.09:0,72,907	0/0:34,0:34:90.08:0,90,1107	1/1:19,0:19:3.20:70,3,0	0/1:13,5:17:5.26:186,0,5	1/1:11,3:13:23.35:192,23,0	1/1:18,6:19:17.30:169,17,0	0/0:27,0:27:78.07:0,78,981	1/1:7,3:10:13.51:112,14,0	1/1:12,21:28:35.68:256,36,0	0/0:14,0:14:42.10:0,42,532	1/1:15,4:18:12.43:303,12,0	1/1:6,11:15:37.47:393,37,0	1/1:5,1:6:14.54:126,15,0
chr10	69240132	.	AG	A	2341.53	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=13.820;DP=641;FS=9.981;HRun=8;HaplotypeScore=128.4490;InbreedingCoeff=0.3087;MQ=61.79;MQ0=15;MQRankSum=-4.066;QD=7.78;ReadPosRankSum=2.557;VQSLOD=0.7009;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,37:43:95.86:851,96,0	0/0:9,0:9:27.08:0,27,325	0/0:30,0:20:45.05:0,45,505	0/0:22,0:17:45.12:0,45,511	1/1:1,17:14:35.97:319,36,0	0/0:25,0:24:60.17:0,60,708	0/0:26,0:26:72.18:0,72,845	0/1:30,0:31:10.82:11,0,75	0/0:16,0:16:39.12:0,39,464	1/1:3,15:17:44.65:383,45,0	1/1:4,10:17:35.25:272,35,0	0/0:33,0:32:84.25:0,84,1003	0/0:24,1:25:54.17:0,54,649	0/0:25,0:25:69.18:0,69,796	0/0:28,0:28:78.23:0,78,927	0/0:26,0:26:68.84:0,69,802	0/0:34,0:34:75.21:0,75,883	1/1:3,15:19:41.66:369,42,0	0/1:12,0:17:42.19:42,0,70	0/1:5,0:15:23.76:24,0,113	0/1:16,0:22:26.65:27,0,27	0/0:27,0:27:69.21:0,69,822	0/1:4,0:11:15.91:16,0,18	0/1:26,0:28:12.99:13,0,81	0/0:14,0:14:39.12:0,39,467	0/1:8,0:19:33.72:60,0,34	0/1:13,0:16:11.07:119,0,11	0/1:1,0:6:10.87:27,0,11
chr10	69242555	.	CGTGTGTGT	C	1461.11	PASS	AB=0.781;AC=21;AF=0.389;AN=54;BaseQRankSum=5.698;DP=629;FS=6.310;HRun=0;HaplotypeScore=170.9267;InbreedingCoeff=0.4240;MQ=68.25;MQ0=22;MQRankSum=-5.879;QD=4.99;ReadPosRankSum=1.275;VQSLOD=2.1302;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:27:8.98:153,0,9	0/0:6,0:12:18.36:0,18,140	./.	0/0:34,0:22:1.25:0,1,3	1/1:9,0:22:6.40:41,6,0	0/0:7,0:14:15.05:0,15,307	0/0:35,0:35:15.01:0,15,1380	1/1:27,0:28:2.36:4,2,0	0/0:14,0:14:12.04:0,12,392	0/1:16,1:24:66.33:66,0,117	1/1:15,0:15:2.90:16,3,0	0/0:17,0:16:30.10:0,30,980	0/0:20,0:21:24.04:0,24,537	0/0:16,0:16:30.04:0,30,659	0/0:13,0:18:8.67:0,9,80	0/0:17,0:23:15.03:0,15,443	0/0:14,0:12:18.06:0,18,559	0/1:27,7:33:17.49:301,0,17	1/1:10,0:14:8.98:167,9,0	1/1:15,0:24:12.04:192,12,0	0/0:42,0:41:3.37:0,3,12	0/0:21,0:21:26.90:0,27,680	1/1:9,9:18:9.03:213,9,0	0/1:13,10:24:34.21:34,0,81	0/0:14,0:14:12.03:0,12,245	1/1:21,0:21:1.46:53,1,0	1/1:13,0:20:17.85:292,18,0	0/1:11,0:17:13.57:103,0,14
chr10	69243596	.	AATGGATGGATGG	A	4454.75	PASS	AB=0.652;AC=18;AF=0.346;AN=52;BaseQRankSum=9.477;DP=714;FS=2.456;HRun=0;HaplotypeScore=237.5705;InbreedingCoeff=0.7309;MQ=71.44;MQ0=2;MQRankSum=-6.599;QD=18.48;ReadPosRankSum=-1.506;VQSLOD=3.5081;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:34:1.09:0,1,49	0/0:16,0:15:24.07:0,24,1022	./.	./.	0/1:9,0:20:6.70:7,0,58	0/0:31,0:31:54.17:0,54,2294	0/0:20,0:20:21.07:0,21,823	1/1:27,0:25:6.02:92,6,0	0/0:27,0:27:48.16:0,48,2216	0/0:21,0:30:39.13:0,39,977	0/0:7,0:15:11.69:0,12,319	0/0:32,0:32:66.23:0,66,3245	0/0:29,0:29:51.54:0,52,2377	0/0:23,0:24:48.16:0,48,2072	0/0:33,0:33:45.14:0,45,2072	0/0:27,0:27:54.19:0,54,2577	0/0:33,0:33:60.21:0,60,2613	0/0:18,0:26:3.29:0,3,43	1/1:16,5:19:15.05:378,15,0	1/1:15,11:26:27.09:562,27,0	1/1:27,0:26:12.03:288,12,0	0/0:29,0:29:69.22:0,69,3230	1/1:10,12:22:15.05:393,15,0	0/1:14,15:29:65.25:242,0,65	0/0:20,0:20:39.13:0,39,1697	1/1:14,15:30:45.09:1220,45,0	1/1:8,16:24:36.07:1100,36,0	1/1:7,8:15:6.02:173,6,0
chr10	69244875	.	T	TA	4456.38	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=15.193;DP=490;FS=0.811;HRun=2;HaplotypeScore=84.5103;InbreedingCoeff=0.9880;MQ=75.15;MQ0=1;MQRankSum=-13.334;QD=36.53;ReadPosRankSum=-1.443;VQSLOD=4.6959;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:90.25:0,90,1202	0/0:10,0:10:30.10:0,30,419	0/0:18,0:18:50.42:0,50,611	0/0:20,0:20:26.88:0,27,492	0/0:25,0:25:72.24:0,72,1002	0/0:26,0:26:78.23:0,78,1056	0/0:15,0:15:45.15:0,45,629	1/1:0,16:16:48.16:665,48,0	0/0:20,0:20:60.17:0,60,797	0/0:14,0:14:39.13:0,39,542	0/0:20,0:20:57.19:0,57,795	0/0:12,0:12:36.12:0,36,500	0/0:20,0:20:60.19:0,60,823	0/0:16,0:16:45.13:0,45,598	0/0:16,0:16:48.16:0,48,671	0/0:17,0:17:51.17:0,51,713	0/0:25,0:25:75.25:0,75,1048	0/0:20,0:20:60.16:0,60,817	1/1:1,24:24:72.23:971,72,0	1/1:2,15:17:51.14:672,51,0	1/1:0,7:7:12.02:147,12,0	0/0:23,0:23:66.20:0,66,890	1/1:2,6:8:18.04:230,18,0	1/1:0,10:10:27.09:376,27,0	0/0:20,0:20:57.19:0,57,794	1/1:1,17:18:12.20:648,12,0	1/1:1,13:14:42.13:553,42,0	1/1:4,3:7:20.11:194,20,0
chr10	69245164	.	T	TGCCTAG	3073.43	PASS	AB=0.950;AC=19;AF=0.339;AN=56;BaseQRankSum=-3.000;DP=417;FS=5.424;HRun=0;HaplotypeScore=88.6423;InbreedingCoeff=0.8223;MQ=60.98;MQ0=14;MQRankSum=-7.476;QD=44.54;ReadPosRankSum=-1.661;VQSLOD=2.9655;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:40:99:0,117,2746	0/0:8,0:8:24.08:0,24,597	0/0:28,0:11:30.07:0,30,689	0/0:40,0:21:53.54:0,54,1155	0/0:31,0:31:87.30:0,87,2157	0/0:14,0:14:42.14:0,42,1062	0/0:21,0:21:63.22:0,63,1603	1/1:1,1:5:15.02:272,15,0	0/0:9,0:9:27.09:0,27,678	0/0:10,0:10:27.09:0,27,687	0/0:13,0:13:36.07:0,36,864	0/0:16,0:16:48.15:0,48,1120	0/0:18,0:18:54.17:0,54,1324	0/0:15,0:15:45.14:0,45,1101	0/0:17,0:17:51.16:0,51,1216	0/0:13,0:13:39.13:0,39,981	0/0:22,0:22:66.20:0,66,1597	0/1:18,0:19:51.22:51,0,1256	1/1:2,8:9:27.09:1009,27,0	1/1:3,1:4:6.02:203,6,0	1/1:5,1:6:6.02:225,6,0	0/0:11,0:11:33.11:0,33,846	1/1:0,2:4:9.03:266,9,0	1/1:1,2:4:6.02:173,6,0	0/0:21,0:21:63.22:0,63,1609	1/1:3,4:8:18.04:512,18,0	1/1:2,6:8:12.04:446,12,0	1/1:0,1:1:3.01:113,3,0
chr10	69246951	.	T	TC	8067.92	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-0.334;DP=566;FS=6.428;HRun=1;HaplotypeScore=64.8122;InbreedingCoeff=0.9797;MQ=86.24;MQ0=0;MQRankSum=-1.962;QD=44.82;ReadPosRankSum=-1.096;VQSLOD=4.2170;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,123,1698	0/0:7,0:7:21.07:0,21,294	0/0:25,0:25:72.21:0,72,974	0/0:24,0:23:63.06:0,63,809	0/0:9,0:9:21.07:0,21,293	0/0:12,0:12:36.12:0,36,504	0/0:30,0:30:90.30:0,90,1257	1/1:1,30:31:93.29:1440,93,0	0/0:21,0:21:60.20:0,60,839	0/0:15,0:15:45.15:0,45,630	0/0:4,0:4:12.04:0,12,167	0/0:23,0:23:69.22:0,69,948	0/0:21,0:21:63.21:0,63,879	0/0:25,0:25:75.24:0,75,1032	0/0:31,0:31:90.30:0,90,1257	0/0:27,0:27:81.25:0,81,1098	0/0:36,0:36:99:0,108,1488	0/0:22,0:22:66.20:0,66,902	1/1:2,18:20:57.19:907,57,0	1/1:0,13:13:33.11:527,33,0	1/1:0,30:30:90.31:1438,90,0	0/0:10,0:10:24.08:0,24,335	1/1:0,6:6:12.04:191,12,0	1/1:0,23:23:60.20:957,60,0	0/0:3,0:3:9.03:0,9,125	1/1:0,22:22:63.20:982,63,0	1/1:0,22:22:66.23:1051,66,0	1/1:0,13:13:36.12:575,36,0
chr10	69247146	.	CTATATATATA	C	1321.77	PASS	AC=8;AF=0.222;AN=36;BaseQRankSum=-0.649;DP=213;FS=2.300;HRun=0;HaplotypeScore=68.6231;InbreedingCoeff=0.6238;MQ=75.12;MQ0=3;MQRankSum=-2.842;QD=20.03;ReadPosRankSum=-0.456;VQSLOD=1.9890;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:15.05:0,15,621	./.	0/0:7,0:6:3.01:0,3,32	0/0:10,0:6:2.08:0,2,7	0/0:10,0:11:18.06:0,18,668	0/0:3,0:4:6.02:0,6,262	./.	1/1:24,6:30:20.79:566,21,0	0/0:2,0:2:3.01:0,3,49	0/0:9,0:9:6.02:0,6,253	./.	./.	0/0:4,0:5:6.02:0,6,270	0/0:2,0:2:3:0,3,25	0/0:6,0:7:3.01:0,3,131	./.	0/0:14,0:15:11.80:0,12,489	0/0:21,0:18:27.09:0,27,1026	1/1:13,1:14:15.04:322,15,0	1/1:9,1:10:12.04:311,12,0	./.	./.	./.	./.	0/0:6,0:6:12.04:0,12,544	./.	1/1:12,0:12:12.04:250,12,0	0/0:1,0:1:0:0,0,0
chr10	69247164	.	A	ATC	914.80	PASS	AB=0.917;AC=13;AF=0.325;AN=40;BaseQRankSum=-0.045;DP=162;FS=5.069;HRun=0;HaplotypeScore=44.7374;InbreedingCoeff=0.3892;MQ=68.94;MQ0=3;MQRankSum=2.033;QD=12.88;ReadPosRankSum=3.004;VQSLOD=2.7511;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,11:12:2.36:218,2,0	./.	0/1:10,0:6:12.34:17,0,12	0/0:15,0:4:8.96:0,9,37	1/1:9,3:12:19.62:365,20,0	1/1:3,0:2:5.35:29,5,0	0/0:1,0:1:3:0,3,25	0/0:30,0:30:74.05:0,74,570	0/0:3,0:3:3:0,3,25	1/1:1,0:3:9.01:86,9,0	./.	./.	0/0:4,0:4:3.17:0,3,65	0/0:1,0:1:3:0,3,25	1/1:1,0:1:2.98:22,3,0	./.	0/1:12,0:12:1.98:2,0,33	0/1:12,1:15:18.35:310,0,18	0/0:8,0:8:23.94:0,24,210	0/0:8,0:8:12.82:0,13,106	./.	./.	./.	./.	0/0:5,0:5:12:0,12,121	0/0:3,0:3:8.60:0,9,50	0/0:7,0:7:17.98:0,18,151	0/0:2,0:2:5.95:0,6,43
chr10	69247171	.	TATATA	T	544.21	PASS	AB=0.931;AC=7;AF=0.140;AN=50;BaseQRankSum=4.262;DP=160;FS=0.977;HRun=0;HaplotypeScore=48.6200;InbreedingCoeff=0.1313;MQ=68.54;MQ0=3;MQRankSum=-3.803;QD=9.55;ReadPosRankSum=1.719;VQSLOD=1.7625;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:11:18.06:0,18,494	./.	0/0:13,0:7:19.58:0,20,147	0/1:15,0:5:3.03:3,0,105	0/0:11,0:11:30.10:0,30,621	0/0:3,0:2:6.02:0,6,160	0/0:3,0:3:9.03:0,9,113	0/1:21,0:21:99:155,0,429	0/0:3,0:3:6.01:0,6,63	0/0:4,0:4:12.04:0,12,240	0/0:3,0:2:2.96:0,3,38	0/0:1,0:1:0:0,0,0	0/0:3,0:3:9.03:0,9,212	./.	0/0:1,0:1:3.01:0,3,80	0/0:1,0:1:3.01:0,3,38	0/0:14,0:14:20.82:0,21,423	0/0:18,0:15:39.13:0,39,879	0/1:6,1:7:79.26:147,0,79	0/1:5,2:7:54.92:190,0,55	./.	0/0:2,0:2:6.02:0,6,75	0/1:2,0:1:0:0,0,0	0/0:2,0:2:2.04:0,2,6	0/0:6,0:6:18.06:0,18,430	0/0:1,0:1:3.01:0,3,38	1/1:3,2:5:9.91:161,10,0	0/0:3,0:2:2.88:0,3,15
chr10	69250724	.	A	AACACACAC	5464.72	PASS	AB=0.717;AC=25;AF=0.463;AN=54;BaseQRankSum=6.275;DP=557;FS=0.000;HRun=0;HaplotypeScore=145.9651;InbreedingCoeff=0.8937;MQ=66.65;MQ0=13;MQRankSum=-6.443;QD=20.78;ReadPosRankSum=-2.787;VQSLOD=3.5389;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:20,0:32:0:0,0,0	0/0:8,0:7:5.97:0,6,143	0/0:35,0:21:6.01:0,6,108	0/0:31,0:22:18.94:0,19,397	1/1:13,0:12:6.02:164,6,0	0/0:17,0:18:27.08:0,27,632	0/0:28,0:27:50.82:0,51,1276	1/1:32,0:30:29.99:591,30,0	0/0:23,0:23:51.18:0,51,1295	1/1:18,0:17:23.80:412,24,0	./.	0/0:14,0:14:33.09:0,33,722	0/0:15,0:15:30.10:0,30,761	0/0:23,0:23:35.09:0,35,796	0/0:18,0:18:33.09:0,33,718	0/0:21,0:21:42.10:0,42,955	0/0:29,0:28:57.11:0,57,1359	1/1:9,0:9:15.05:395,15,0	1/1:18,0:17:31.11:621,31,0	1/1:21,0:19:26.99:771,27,0	1/1:16,0:15:20.92:469,21,0	0/0:11,0:11:18.06:0,18,402	1/1:10,0:9:12.04:338,12,0	1/1:10,17:28:2.94:19,3,0	0/0:14,0:14:36.11:0,36,829	1/1:22,0:21:26.94:549,27,0	1/1:29,0:29:35.99:667,36,0	1/1:13,0:12:21.92:470,22,0
chr10	69251704	.	T	TC	4294.85	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-10.747;DP=624;FS=2.651;HRun=8;HaplotypeScore=71.2578;InbreedingCoeff=0.9805;MQ=74.81;MQ0=1;MQRankSum=-0.242;QD=22.72;ReadPosRankSum=0.938;VQSLOD=5.4617;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:3,0:39:61.11:0,61,179	0/0:13,0:13:39.02:0,39,355	0/0:27,0:26:34.25:0,34,431	0/0:22,0:23:35.21:0,35,341	0/0:1,0:14:18.55:0,19,59	0/0:14,0:14:39:0,39,352	0/0:36,0:36:84.01:0,84,767	1/1:13,16:29:39.10:440,39,0	0/0:18,0:18:54.03:0,54,494	0/0:20,0:20:48.02:0,48,439	0/0:14,0:14:12.70:0,13,327	0/0:22,0:22:59.95:0,60,548	0/0:27,0:27:69.03:0,69,630	0/0:19,0:19:39:0,39,355	0/0:31,0:31:78.03:0,78,709	0/0:20,0:20:51.02:0,51,467	0/0:24,0:24:60.01:0,60,543	0/0:26,0:26:72.04:0,72,658	1/1:5,12:17:36.08:402,36,0	1/1:5,12:16:27.08:312,27,0	1/1:7,32:41:68.48:1005,68,0	0/0:26,0:26:63.01:0,63,576	1/1:1,13:13:21.06:242,21,0	1/1:0,19:19:48.14:554,48,0	0/0:21,0:21:54.02:0,54,494	1/1:5,20:25:8.23:589,8,0	1/1:2,20:22:50.90:588,51,0	1/1:1,4:5:15.03:162,15,0
chr10	69254628	.	GCT	G	1393.99	PASS	AB=0.959;AC=26;AF=0.500;AN=52;BaseQRankSum=4.622;DP=656;FS=46.952;HRun=0;HaplotypeScore=87.6701;InbreedingCoeff=0.5759;MQ=68.49;MQ0=12;MQRankSum=3.909;QD=3.90;ReadPosRankSum=3.905;VQSLOD=0.3952;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:23,3:36:29.07:214,29,0	1/1:11,5:17:11.87:112,12,0	./.	0/1:33,0:22:0:0,0,0	1/1:17,1:19:14.84:126,15,0	0/1:16,0:16:8.13:8,0,37	0/1:23,0:23:32.12:32,0,218	0/0:40,0:40:24.03:0,24,282	1/1:17,4:23:14.70:126,15,0	0/0:23,0:21:33.04:0,33,394	0/0:17,0:17:12.03:0,12,156	1/1:22,9:33:14.71:126,15,0	1/1:11,6:20:20.23:173,20,0	1/1:18,3:25:17.38:151,17,0	1/1:14,2:23:17.55:140,18,0	1/1:8,9:20:27.33:223,27,0	0/1:22,2:25:35.42:35,0,291	0/0:19,1:23:6.28:0,6,366	0/0:29,0:29:6.02:0,6,80	0/0:14,0:14:8.72:0,9,80	0/0:20,0:19:2.97:0,3,20	1/1:20,1:23:5.85:47,6,0	./.	0/0:24,0:24:9:0,9,77	1/1:12,5:17:6.01:65,6,0	0/0:19,0:22:27.06:0,27,265	0/0:15,0:15:3.01:0,3,38	0/0:22,0:19:3.01:0,3,39
chr10	69256389	.	GTCTCTGTCTGTCTGTC	G	1698.64	PASS	AB=0.995;AC=13;AF=0.232;AN=56;BaseQRankSum=10.508;DP=580;FS=4.045;HRun=0;HaplotypeScore=233.4868;InbreedingCoeff=0.2501;MQ=53.72;MQ0=10;MQRankSum=-0.135;QD=7.52;ReadPosRankSum=-3.766;VQSLOD=2.0902;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:13.05:0,13,420	0/0:5,0:4:8.99:0,9,75	0/0:32,0:12:29.01:0,29,275	0/0:38,0:28:74.08:0,74,698	0/0:12,0:12:23.71:0,24,184	0/0:18,0:18:41.86:0,42,333	0/0:31,0:31:59.91:0,60,497	0/0:23,0:21:62.92:0,63,562	0/0:13,0:13:16.88:0,17,206	1/1:2,19:21:59.74:660,60,0	1/1:0,17:17:5.61:70,6,0	0/0:19,0:18:35.90:0,36,292	0/0:11,0:11:29.85:0,30,235	0/0:12,0:12:10.99:0,11,162	0/0:19,0:19:23.59:0,24,261	0/1:14,0:14:89.21:89,0,192	0/0:27,0:27:56.64:0,57,436	1/1:16,0:16:44.78:408,45,0	0/0:23,0:19:50.91:0,51,435	0/1:16,0:16:99:131,0,166	0/1:50,0:45:99:109,0,730	0/0:17,0:17:17.58:0,18,160	0/1:8,0:8:32.28:32,0,79	0/1:29,0:30:99:100,0,252	0/0:12,0:12:17.80:0,18,163	0/1:28,0:28:99:205,0,430	0/1:26,0:25:61.46:61,0,314	0/0:9,0:8:20.36:0,20,170
chr10	69256391	.	CTCTGTCTGTCTGTCTG	C	2596.41	PASS	AB=1.000;AC=35;AF=0.833;AN=42;BaseQRankSum=-0.325;DP=591;FS=1.949;HRun=0;HaplotypeScore=239.1526;InbreedingCoeff=0.1527;MQ=53.11;MQ0=13;MQRankSum=0.150;QD=6.44;ReadPosRankSum=1.276;VQSLOD=2.5122;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:32,0:32:6.63:60,7,0	./.	./.	./.	./.	0/1:18,0:18:0:0,0,0	./.	0/0:24,0:22:0:0,0,0	1/1:16,0:16:3.83:72,4,0	1/1:22,0:21:11.98:201,12,0	1/1:17,0:17:2.68:36,3,0	1/1:19,0:18:3:25,3,0	./.	1/1:13,0:13:0.30:59,0,0	1/1:21,0:21:9.49:103,9,0	1/1:14,0:14:6.02:158,6,0	1/1:27,0:27:2.78:26,3,0	1/1:17,0:17:8.82:143,9,0	./.	1/1:9,8:16:9.03:214,9,0	1/1:51,0:46:18.92:418,19,0	0/0:8,0:17:2.60:0,3,55	1/1:8,0:7:6.01:89,6,0	0/1:33,0:33:1.05:350,0,1	1/1:12,0:12:2.66:6,3,0	1/1:29,0:29:33.02:589,33,0	1/1:17,10:26:3.01:129,3,0	0/1:10,0:8:13.98:14,0,29
chr10	69256397	.	CTG	C	36.15	PASS	AB=0.880;AC=5;AF=0.089;AN=56;BaseQRankSum=6.106;DP=567;FS=10.529;HRun=0;HaplotypeScore=125.9533;InbreedingCoeff=-0.1117;MQ=52.03;MQ0=22;MQRankSum=-5.015;QD=0.47;ReadPosRankSum=-3.972;VQSLOD=0.0993;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:56.85:0,57,804	0/0:5,0:4:9.03:0,9,128	0/0:26,0:10:29.13:0,29,386	0/0:29,0:21:38.91:0,39,706	0/0:9,0:9:21.07:0,21,298	0/0:16,0:16:30.10:0,30,423	0/0:30,0:29:51.15:0,51,708	0/0:21,0:19:53.65:0,54,709	0/1:10,5:15:49.04:49,0,310	0/0:20,0:19:49.32:0,49,636	0/0:17,0:17:2.92:0,3,17	0/1:13,1:13:13.20:13,0,315	0/0:11,0:10:27.09:0,27,385	0/1:9,2:11:24.13:24,0,218	0/1:17,3:20:51.78:52,0,413	0/0:23,0:23:3.22:0,3,371	0/0:22,1:24:25.52:0,26,579	0/1:17,0:17:11.78:12,0,478	0/0:29,0:21:49.36:0,49,530	0/0:17,0:16:26.30:0,26,350	0/0:47,0:41:99:0,99,1328	0/0:16,0:15:14.74:0,15,197	0/0:10,0:8:12.03:0,12,171	0/0:37,0:35:45.13:0,45,571	0/0:10,0:10:18.04:0,18,237	0/0:29,0:29:80.75:0,81,1039	0/0:26,0:25:41.59:0,42,618	0/0:9,0:6:14.61:0,15,167
chr10	69256405	.	CTG	C	701.13	PASS	AB=0.862;AC=10;AF=0.179;AN=56;BaseQRankSum=9.146;DP=562;FS=15.127;HRun=0;HaplotypeScore=131.7253;InbreedingCoeff=-0.0847;MQ=49.63;MQ0=27;MQRankSum=-4.689;QD=3.13;ReadPosRankSum=-4.659;VQSLOD=-0.2797;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:47.78:0,48,637	0/0:5,0:4:9.03:0,9,128	0/0:15,1:7:18.06:0,18,253	0/0:22,1:15:29.89:0,30,393	0/0:12,0:10:20.88:0,21,299	0/0:16,0:16:24.96:0,25,341	0/0:26,0:24:39.12:0,39,539	0/0:20,0:18:51.17:0,51,718	0/0:20,0:20:13.44:0,13,334	0/1:21,0:19:17.81:18,0,459	1/1:17,0:17:2.60:16,3,0	0/0:19,0:17:19.42:0,19,335	0/0:15,0:14:30.01:0,30,280	0/0:13,0:11:6.53:0,7,169	0/0:19,0:19:4.29:0,4,258	0/1:24,0:23:52.80:53,0,251	0/0:29,0:28:40.96:0,41,568	0/0:20,0:20:24.71:0,25,455	0/1:18,5:15:99:171,0,247	0/1:18,0:17:99:101,0,291	0/1:38,10:42:90.09:90,0,1060	0/0:16,0:15:8.60:0,9,128	0/1:5,5:8:99:111,0,109	0/1:24,13:35:99:130,0,483	0/0:10,0:9:12.04:0,12,171	0/1:21,5:26:99:151,0,787	0/0:22,0:22:15.19:0,15,450	0/0:7,0:4:9.03:0,9,128
chr10	69256409	.	CTG	C	483.67	PASS	AB=0.957;AC=11;AF=0.196;AN=56;BaseQRankSum=10.226;DP=551;FS=3.699;HRun=0;HaplotypeScore=134.0152;InbreedingCoeff=-0.2349;MQ=49.26;MQ0=30;MQRankSum=-10.666;QD=2.69;ReadPosRankSum=-5.225;VQSLOD=0.5918;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:26:41.79:0,42,596	0/1:7,0:6:4.01:4,0,114	0/0:13,0:5:15.05:0,15,210	0/0:19,0:11:23.67:0,24,310	0/0:14,0:12:20.86:0,21,299	0/0:16,0:16:10.99:0,11,321	0/0:28,0:26:20.97:0,21,474	0/0:20,0:18:45.14:0,45,628	0/1:18,0:18:54.43:54,0,195	0/0:22,0:20:51.09:0,51,644	0/0:16,0:16:2.85:0,3,17	0/1:21,0:19:6.58:7,0,261	0/1:17,0:15:47.28:47,0,177	0/1:15,0:13:31.69:32,0,126	0/1:18,0:18:24.53:25,0,225	0/1:10,15:24:99:398,0,248	0/0:27,0:26:14.05:0,14,522	0/0:18,0:18:18.69:0,19,422	0/1:20,1:12:32.71:33,0,233	0/1:18,1:18:4.76:5,0,268	0/0:48,0:42:42.23:0,42,1081	0/0:16,0:14:8.73:0,9,128	0/1:9,0:7:10.73:11,0,73	0/0:35,0:33:18.27:0,18,533	0/1:10,0:9:5.16:5,0,154	0/0:24,0:24:46.93:0,47,765	0/0:22,0:22:27.01:0,27,444	0/0:6,0:3:9.03:0,9,128
chr10	69256413	.	CTG	C	1717.71	PASS	AB=0.772;AC=12;AF=0.214;AN=56;BaseQRankSum=8.732;DP=553;FS=1.639;HRun=0;HaplotypeScore=129.4854;InbreedingCoeff=-0.3090;MQ=48.18;MQ0=31;MQRankSum=-10.688;QD=7.70;ReadPosRankSum=-0.784;VQSLOD=3.3699;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:25:17.64:0,18,524	0/1:5,3:7:74.76:75,0,113	0/0:12,0:5:11.72:0,12,117	0/0:15,0:8:21.05:0,21,277	0/0:15,0:12:4.96:0,5,259	0/1:13,5:18:58.84:59,0,291	0/1:23,6:27:92.95:93,0,428	0/0:20,0:19:54.12:0,54,691	0/1:7,10:17:99:410,0,129	0/0:22,0:20:45.15:0,45,647	0/0:15,0:15:2.94:0,3,42	0/1:12,8:18:99:150,0,227	0/1:6,10:15:99:324,0,116	0/1:7,7:12:41.25:238,0,41	0/1:12,6:18:99:189,0,222	0/1:26,0:25:43.68:44,0,255	0/1:19,8:26:99:130,0,461	0/1:19,0:19:85.19:85,0,287	0/0:21,0:12:30.26:0,30,394	0/0:17,0:16:27:0,27,323	0/0:49,0:43:95.35:0,95,1354	0/0:16,0:14:0.71:0,1,97	0/0:8,0:6:15.02:0,15,166	0/0:38,0:36:60.53:0,61,781	0/1:7,3:9:70.43:70,0,153	0/0:24,0:24:69.21:0,69,940	0/0:24,0:24:33.03:0,33,522	0/0:7,0:4:12.04:0,12,158
chr10	69256415	.	GTC	G	1028.08	PASS	AB=0.981;AC=14;AF=0.250;AN=56;BaseQRankSum=8.311;DP=549;FS=4.045;HRun=0;HaplotypeScore=133.6717;InbreedingCoeff=-0.3478;MQ=48.25;MQ0=32;MQRankSum=-9.499;QD=4.06;ReadPosRankSum=-0.172;VQSLOD=2.8817;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:25:32.68:33,0,478	0/1:8,0:7:38.92:39,0,112	0/0:10,0:4:8.96:0,9,100	0/0:15,0:7:15.03:0,15,180	0/1:18,0:15:27.65:28,0,235	0/1:17,0:17:25.99:26,0,262	0/1:28,0:27:29.22:29,0,425	0/0:21,0:20:54.18:0,54,764	0/1:16,0:16:99:228,0,129	0/0:22,0:20:45.10:0,45,613	0/0:16,0:16:5.13:0,5,65	0/1:20,0:18:78:78,0,226	0/1:16,0:14:95.33:184,0,95	0/1:13,0:11:43.37:127,0,43	0/1:18,0:18:99:102,0,204	0/0:25,0:24:40.03:0,40,321	0/1:27,0:26:61.75:62,0,400	0/1:12,7:19:99:196,0,254	0/0:20,0:12:29.91:0,30,358	0/0:16,0:15:27.07:0,27,348	0/0:50,0:44:99:0,102,1419	0/1:14,0:13:18.61:19,0,77	0/0:8,0:6:15.05:0,15,205	0/0:39,0:37:63.64:0,64,857	0/1:10,0:9:32.57:33,0,153	0/0:23,0:23:66.22:0,66,975	0/0:24,0:24:32.81:0,33,488	0/0:7,0:4:12.04:0,12,171
chr10	69256417	.	CTG	C	310.95	PASS	AB=0.948;AC=10;AF=0.179;AN=56;BaseQRankSum=8.584;DP=552;FS=2.489;HRun=0;HaplotypeScore=136.9629;InbreedingCoeff=-0.2390;MQ=47.77;MQ0=33;MQRankSum=-10.389;QD=1.81;ReadPosRankSum=1.486;VQSLOD=2.6087;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:23,5:26:88.59:89,0,419	0/1:8,0:7:4.10:4,0,94	0/0:10,0:3:5.98:0,6,63	0/0:18,0:6:9.02:0,9,113	0/1:10,8:15:71.45:71,0,191	0/0:18,0:18:11.66:0,12,253	0/0:28,0:26:20.90:0,21,435	0/0:20,0:19:54.17:0,54,756	0/1:16,0:16:55.73:56,0,134	0/0:22,0:20:42.13:0,42,590	0/0:18,0:18:8.92:0,9,106	0/1:20,0:18:9.26:9,0,210	0/1:15,0:13:47.93:48,0,99	0/1:13,0:11:26.05:26,0,68	0/1:18,0:18:21.96:22,0,167	0/0:23,0:22:44.61:0,45,452	0/0:26,0:25:5.29:0,5,353	0/1:20,0:20:91.73:92,0,276	0/0:20,0:11:27.07:0,27,343	0/0:16,0:15:27.05:0,27,354	0/0:51,0:45:99:0,102,1424	0/1:15,1:14:32.50:33,0,115	0/0:9,0:7:15.03:0,15,194	0/0:39,0:37:60.18:0,60,857	0/0:11,0:10:2.22:0,2,177	0/0:22,0:22:66.22:0,66,981	0/0:22,0:22:27.01:0,27,425	0/0:7,0:4:12.04:0,12,170
chr10	69256835	.	C	CCTCGAGCAATT	2302.82	PASS	AB=0.818;AC=34;AF=0.944;AN=36;BaseQRankSum=-2.669;DP=54;FS=9.331;HRun=0;HaplotypeScore=22.5071;InbreedingCoeff=-0.1743;MQ=126.68;MQ0=0;MQRankSum=-2.269;QD=45.15;ReadPosRankSum=-2.358;VQSLOD=1.0364;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/1:3,1:7:11.42:516,0,11	0/1:5,0:5:27.97:257,0,28	1/1:2,0:3:5.98:86,6,0	./.	./.	./.	1/1:1,0:1:3.01:50,3,0	1/1:4,0:4:9.03:187,9,0	1/1:2,0:2:5.93:40,6,0	1/1:4,0:4:8.99:162,9,0	./.	1/1:1,0:1:3.01:70,3,0	./.	1/1:3,0:3:8.94:111,9,0	./.	1/1:1,0:1:3.01:40,3,0	1/1:4,0:4:12.03:208,12,0	1/1:2,0:2:6.02:115,6,0	1/1:5,0:5:14.98:203,15,0	1/1:1,0:1:2.97:20,3,0	1/1:2,0:2:3.01:71,3,0	1/1:1,0:2:3.01:44,3,0	1/1:1,0:1:3.01:70,3,0	./.	1/1:3,0:3:9.02:144,9,0	./.
chr10	69258906	.	CT	C	1966.59	PASS	AB=0.838;AC=29;AF=0.518;AN=56;BaseQRankSum=5.293;DP=621;FS=0.000;HRun=15;HaplotypeScore=85.4637;InbreedingCoeff=0.3287;MQ=73.42;MQ0=2;MQRankSum=-0.871;QD=4.66;ReadPosRankSum=4.153;VQSLOD=1.8390;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,19:33:16.35:193,16,0	0/1:4,2:6:10.37:10,0,34	0/0:30,0:17:11.98:0,12,79	0/1:23,0:15:2.50:2,0,41	1/1:8,15:27:4.57:165,5,0	0/1:17,1:19:1.17:1,0,209	0/1:21,5:27:16.85:17,0,329	1/1:16,15:34:43.32:254,43,0	0/0:22,0:23:29.77:0,30,330	1/1:7,9:18:24.61:144,25,0	1/1:8,10:20:9.73:85,10,0	0/0:12,4:16:0.37:0,0,234	0/1:19,1:21:2.12:2,0,213	0/0:17,1:18:2.33:0,2,117	0/0:18,0:19:34.03:0,34,295	0/0:20,1:21:21.05:0,21,304	0/0:26,2:30:18.34:0,18,394	1/1:8,12:21:30.56:183,31,0	0/1:18,7:26:58.58:90,0,59	1/1:14,8:25:30.22:173,30,0	0/1:7,6:13:8.27:62,0,8	0/0:19,1:20:1.88:0,2,145	1/1:10,6:17:17.29:108,17,0	1/1:6,20:26:32.39:211,32,0	0/0:20,1:22:9.35:0,9,252	1/1:11,19:34:49.87:304,50,0	0/1:11,12:29:18.23:120,0,18	0/1:3,0:3:17.50:26,0,18
chr10	69260475	.	G	GTGTA	3800.58	PASS	AB=0.914;AC=15;AF=0.268;AN=56;BaseQRankSum=-1.890;DP=813;FS=0.361;HRun=0;HaplotypeScore=185.3625;InbreedingCoeff=0.5889;MQ=65.37;MQ0=15;MQRankSum=1.454;QD=13.11;ReadPosRankSum=-2.038;VQSLOD=3.1194;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:33:24.40:0,24,288	0/0:7,0:7:14.97:0,15,154	0/0:31,0:18:32.21:0,32,344	0/0:24,0:18:50.53:0,51,418	0/0:36,0:36:5.46:0,5,112	0/0:24,0:24:50.46:0,50,583	0/0:48,0:47:99:0,108,1357	1/1:32,0:26:52.29:521,52,0	0/0:29,0:29:59.94:0,60,821	0/0:34,0:30:22.75:0,23,444	0/1:25,0:24:5.23:5,0,149	0/0:31,0:31:72.01:0,72,960	0/0:28,0:27:59.45:0,59,666	0/0:25,0:25:59.89:0,60,723	0/0:32,0:32:92.94:0,93,1262	0/0:24,0:24:60.49:0,60,710	0/0:40,0:40:87.67:0,88,1241	0/0:24,0:24:19.74:0,20,226	0/1:27,0:25:84.81:282,0,85	0/1:23,0:23:23.82:39,0,24	1/1:55,0:52:14.61:698,15,0	0/0:31,0:31:74.93:0,75,894	0/1:5,16:20:0.02:0,0,0	1/1:34,9:42:90.18:1689,90,0	0/0:19,0:19:30.52:0,31,409	1/1:34,0:32:33.07:521,33,0	0/1:23,0:23:4.96:20,0,5	1/1:7,0:6:2.99:24,3,0
chr10	69260477	.	G	GTA	4263.11	PASS	AB=0.764;AC=15;AF=0.268;AN=56;BaseQRankSum=-3.373;DP=831;FS=2.013;HRun=0;HaplotypeScore=160.3087;InbreedingCoeff=0.3874;MQ=64.23;MQ0=16;MQRankSum=0.402;QD=12.65;ReadPosRankSum=-0.444;VQSLOD=4.8124;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:40,0:37:30.31:30,0,232	0/1:7,0:7:14.88:15,0,123	0/0:30,0:17:32.21:0,32,344	0/0:24,0:18:48.98:0,49,407	0/1:38,0:38:31.64:32,0,98	0/0:25,0:25:36.25:0,36,511	0/0:47,0:46:91.35:0,91,1196	1/1:30,0:24:64.50:598,65,0	0/0:31,0:31:65.50:0,66,719	0/0:34,0:30:47.78:0,48,519	0/0:25,0:23:20.12:0,20,186	0/0:31,0:31:71.97:0,72,827	0/0:29,0:28:66.75:0,67,667	0/0:25,0:25:59.92:0,60,642	0/0:32,0:32:93.08:0,93,1109	0/0:25,0:25:47.85:0,48,645	0/0:40,0:40:97.10:0,97,1118	0/0:23,0:23:32.84:0,33,299	0/1:11,16:26:37.47:451,0,37	0/1:5,20:25:6.11:114,0,6	1/1:47,10:54:2.27:1024,2,0	0/0:32,0:31:78:0,78,844	0/0:22,0:21:5.34:0,5,30	1/1:40,3:42:99:1177,103,0	0/0:19,0:19:15.91:0,16,357	1/1:6,27:32:43.33:720,43,0	0/1:4,20:25:4.95:52,0,5	0/1:4,6:9:4.21:51,0,4
chr10	69260591	.	GTGTC	G	2541.32	PASS	AB=0.997;AC=14;AF=0.250;AN=56;BaseQRankSum=2.550;DP=842;FS=0.837;HRun=0;HaplotypeScore=167.2491;InbreedingCoeff=0.5725;MQ=56.27;MQ0=25;MQRankSum=0.552;QD=8.76;ReadPosRankSum=-4.094;VQSLOD=1.8457;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:30,1:29:33.09:510,33,0	0/0:7,0:7:21.06:0,21,411	0/0:47,0:18:27.22:0,27,314	0/0:70,0:17:27.72:0,28,347	1/1:14,1:13:13.31:163,13,0	0/0:19,0:19:54.13:0,54,1175	0/0:42,0:42:99:0,120,2623	0/1:37,0:30:99:141,0,225	0/0:35,0:34:99:0,99,2159	1/1:21,4:25:59.60:816,60,0	1/1:5,2:7:7.84:119,8,0	0/0:35,0:35:99:0,99,2081	0/0:36,0:36:99:0,102,2190	0/0:34,0:33:95.91:0,96,2047	0/0:27,0:27:72.21:0,72,1557	0/0:30,0:30:84.25:0,84,1944	0/0:40,0:39:99:0,100,2316	1/1:25,0:25:59.14:670,59,0	0/1:15,0:11:80.86:106,0,81	0/0:19,0:18:35.59:0,36,362	0/1:96,1:91:99:148,0,1197	0/0:23,0:22:57.14:0,57,1224	0/0:15,0:14:3.55:0,4,315	0/1:38,0:34:49.35:49,0,513	0/0:22,0:22:56.77:0,57,1249	0/0:21,0:21:19.92:0,20,425	0/0:18,0:17:30.36:0,30,392	0/0:12,0:12:23.87:0,24,281
chr10	69260593	.	GTC	G	2552.79	PASS	AB=0.968;AC=15;AF=0.268;AN=56;BaseQRankSum=5.969;DP=830;FS=9.091;HRun=0;HaplotypeScore=141.3259;InbreedingCoeff=0.4894;MQ=56.35;MQ0=26;MQRankSum=1.155;QD=8.48;ReadPosRankSum=-4.371;VQSLOD=1.9807;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:22,7:27:32.76:339,33,0	0/0:7,0:7:21:0,21,299	0/0:43,0:17:28.64:0,29,259	0/0:67,0:17:27.55:0,28,255	1/1:9,6:13:17.99:192,18,0	0/0:19,0:19:54.13:0,54,917	0/0:42,0:42:99:0,120,1886	0/1:34,1:28:99:165,0,138	0/0:36,0:35:99:0,102,1602	1/1:17,6:23:62.74:621,63,0	1/1:5,2:7:8.94:66,9,0	0/0:35,0:35:98.90:0,99,1492	0/0:36,0:36:99:0,102,1609	0/0:33,0:32:95.63:0,96,1545	0/0:27,0:27:74.88:0,75,1158	0/0:30,0:30:84.23:0,84,1450	0/0:40,0:39:98.08:0,98,1679	1/1:16,8:24:53.69:608,54,0	0/1:15,0:11:33.87:141,0,34	0/1:17,2:18:99:157,0,125	0/1:94,1:89:99:315,0,530	0/0:26,0:25:66.11:0,66,1017	0/0:15,0:14:3.38:0,3,158	0/1:38,1:35:99:132,0,227	0/0:21,0:21:56.77:0,57,916	0/0:20,0:20:5.46:0,5,190	0/0:17,0:16:30.06:0,30,229	0/0:12,0:12:14.26:0,14,144
chr10	69260607	.	C	CTG	5587.43	PASS	AB=0.877;AC=24;AF=0.429;AN=56;BaseQRankSum=14.611;DP=841;FS=9.657;HRun=0;HaplotypeScore=146.9858;InbreedingCoeff=0.5763;MQ=52.38;MQ0=37;MQRankSum=-0.920;QD=14.25;ReadPosRankSum=-2.455;VQSLOD=3.5850;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:31,2:31:15.68:305,16,0	0/0:8,0:8:15.05:0,15,181	0/0:32,0:5:2.08:0,2,12	0/0:55,0:9:0.89:0,1,2	1/1:17,0:15:13.18:207,13,0	0/0:21,0:21:40.37:0,40,482	0/0:49,0:49:99:0,126,1469	0/1:31,0:19:15.12:155,0,15	0/0:36,0:36:84.08:0,84,992	1/1:28,2:27:47.99:615,48,0	0/1:6,0:6:10.77:11,0,31	0/0:31,0:32:66.02:0,66,775	0/0:34,0:34:78.05:0,78,900	0/0:34,0:33:55.35:0,55,656	0/0:26,0:28:53.89:0,54,636	0/0:29,0:29:69.21:0,69,841	0/0:42,0:41:99:0,105,1267	1/1:24,0:24:43.67:429,44,0	1/1:15,1:8:5.85:73,6,0	1/1:13,8:19:9.24:370,9,0	1/1:81,18:93:0.36:1242,0,0	0/0:24,0:23:51.16:0,51,621	1/1:15,5:19:1.56:404,2,0	1/1:34,7:37:17.13:635,17,0	0/0:21,0:21:51.16:0,51,625	1/1:21,5:25:43.67:659,44,0	0/1:12,5:15:49.68:252,0,50	0/1:7,4:11:9.29:229,0,9
chr10	69260641	.	CTG	C	8549.34	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=15.817;DP=904;FS=0.308;HRun=0;HaplotypeScore=146.4137;InbreedingCoeff=0.9508;MQ=53.91;MQ0=36;MQRankSum=-2.286;QD=19.74;ReadPosRankSum=-0.644;VQSLOD=4.6883;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:8,31:37:26.91:347,27,0	0/0:10,0:9:24.08:0,24,405	0/0:46,0:7:8.11:0,8,253	0/0:52,1:14:0.74:0,1,165	1/1:2,19:21:36.12:463,36,0	0/0:24,0:23:57.13:0,57,924	0/0:52,0:52:99:0,126,2108	1/1:9,28:31:81.23:1007,81,0	0/0:31,0:31:87.30:0,87,1453	1/1:11,25:32:75.24:959,75,0	1/1:1,6:7:12.04:154,12,0	0/0:31,0:31:81.17:0,81,1305	0/0:36,0:35:96.33:0,96,1612	0/0:37,0:36:84.24:0,84,1319	0/0:32,0:32:90.31:0,90,1514	0/0:29,0:29:78.23:0,78,1315	0/0:38,1:39:60.75:0,61,1576	1/1:11,24:34:47.82:617,48,0	1/1:10,7:11:18.06:230,18,0	1/1:6,21:25:33:424,33,0	1/1:20,68:81:99:1413,111,0	0/0:25,0:25:72.21:0,72,1159	1/1:1,17:16:33.11:425,33,0	1/1:7,39:44:63.20:811,63,0	0/0:25,0:25:66.23:0,66,1113	1/1:4,26:28:34.55:828,35,0	1/1:2,22:22:54.05:668,54,0	1/1:2,6:8:18.03:204,18,0
chr10	69260736	.	G	GGTGT	4921.40	PASS	AB=0.849;AC=20;AF=0.370;AN=54;BaseQRankSum=-4.041;DP=1040;FS=16.849;HRun=0;HaplotypeScore=213.4911;InbreedingCoeff=0.6479;MQ=55.37;MQ0=34;MQRankSum=-1.178;QD=14.87;ReadPosRankSum=-2.134;VQSLOD=2.6441;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:32,0:30:8.61:97,9,0	0/0:11,0:11:18.04:0,18,256	./.	0/0:92,0:24:6.02:0,6,76	1/1:20,0:20:11.88:155,12,0	0/0:30,0:33:54.04:0,54,760	0/0:35,0:39:39.96:0,40,768	1/1:32,2:32:29.71:454,30,0	0/0:33,0:37:60.18:0,60,872	0/1:21,0:21:11.79:152,0,12	1/1:21,2:23:6.95:98,7,0	0/0:33,0:36:59.62:0,60,799	0/0:41,0:42:66.20:0,66,992	0/0:39,0:45:63.62:0,64,822	0/0:30,0:34:63.19:0,63,928	0/0:31,0:34:75.16:0,75,1099	0/0:47,0:48:31.96:0,32,876	0/0:32,0:34:48:0,48,656	1/1:26,1:26:1.91:137,2,0	1/1:19,4:25:29.56:480,30,0	0/0:104,0:109:99:0,112,1834	0/0:29,0:30:57.09:0,57,763	1/1:16,4:21:20.77:298,21,0	1/1:32,23:58:12.25:1792,12,0	0/0:6,0:7:8.92:0,9,98	0/1:29,7:35:2.56:732,0,3	0/1:11,5:15:4.44:326,0,4	0/1:9,0:10:26.74:198,0,27
chr10	69260768	.	TGTCTG	T	1263.04	PASS	AB=0.996;AC=16;AF=0.286;AN=56;BaseQRankSum=5.158;DP=948;FS=42.251;HRun=0;HaplotypeScore=227.1011;InbreedingCoeff=0.1088;MQ=55.64;MQ0=22;MQRankSum=-9.400;QD=3.48;ReadPosRankSum=-4.704;VQSLOD=0.1766;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:23,2:23:5.61:92,6,0	0/0:11,0:11:30.08:0,30,700	0/0:50,0:22:64.09:0,64,1269	0/0:59,0:26:17.56:0,18,953	1/1:22,2:24:11.79:133,12,0	0/0:33,0:33:54.44:0,54,2178	0/0:46,0:46:99:0,132,3082	0/1:55,0:54:40.24:40,0,2699	0/0:32,0:32:90.28:0,90,2263	1/1:28,0:28:18.30:707,18,0	0/1:22,1:23:18.38:18,0,44	0/0:36,0:36:30.41:0,30,2076	0/0:41,0:41:99:0,114,3022	0/0:42,0:41:99:0,102,2463	0/0:31,0:31:87.30:0,87,2278	0/0:33,0:33:93.25:0,93,2495	0/0:38,0:37:80.74:0,81,2531	0/1:23,0:23:94.36:94,0,618	0/1:19,0:15:2.51:3,0,633	0/1:21,0:21:18.29:18,0,1055	0/0:86,0:84:99:0,189,4970	0/0:35,0:35:99:0,99,2409	0/1:24,0:24:25.99:26,0,856	0/1:56,0:53:31.50:31,0,2511	0/0:11,0:11:21.05:0,21,417	0/1:36,0:33:75.23:75,0,1757	0/1:19,0:17:38.56:39,0,660	0/1:10,0:10:99:156,0,268
chr10	69260770	.	TCTG	T	1299.15	PASS	AB=0.943;AC=15;AF=0.268;AN=56;BaseQRankSum=4.675;DP=931;FS=48.016;HRun=0;HaplotypeScore=196.3046;InbreedingCoeff=0.1545;MQ=56.33;MQ0=17;MQRankSum=-5.892;QD=3.88;ReadPosRankSum=-5.564;VQSLOD=-0.7218;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:16,6:22:5.92:92,6,0	0/0:12,0:12:33.09:0,33,686	0/0:47,0:22:63.68:0,64,1226	0/0:57,1:27:21.87:0,22,982	1/1:15,8:23:12.02:176,12,0	0/0:31,0:32:60.97:0,61,1868	0/0:46,0:46:99:0,132,2669	0/1:51,0:50:3.98:4,0,2538	0/0:32,0:32:90.25:0,90,1920	1/1:21,10:31:26.03:825,26,0	0/1:9,11:20:18.90:19,0,41	0/0:33,1:34:33.28:0,33,1712	0/0:40,0:40:99:0,114,2535	0/0:42,0:41:99:0,105,2193	0/0:32,0:32:90.30:0,90,1978	0/0:32,0:32:96.26:0,96,2118	0/0:37,0:37:78.33:0,78,2093	0/1:23,0:23:53.19:53,0,667	0/1:18,1:16:8.08:8,0,757	0/0:22,0:22:4.03:0,4,956	0/0:81,0:79:99:0,192,4226	0/0:37,0:37:99:0,100,2171	0/1:23,0:23:26:26,0,737	0/1:55,1:53:30.79:31,0,1851	0/0:12,0:12:24.53:0,25,456	0/1:36,0:34:59.36:59,0,1544	0/1:20,0:18:35.26:35,0,574	0/1:9,1:10:99:137,0,225
chr10	69260773	.	GGTGTGTATGTACAA	G	3199.58	PASS	AB=0.976;AC=8;AF=0.143;AN=56;BaseQRankSum=6.723;DP=909;FS=2.012;HRun=0;HaplotypeScore=361.7475;InbreedingCoeff=0.6696;MQ=57.72;MQ0=14;MQRankSum=-8.531;QD=26.89;ReadPosRankSum=-0.011;VQSLOD=1.7021;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:17,1:19:8.55:75,9,0	0/0:11,0:11:24.08:0,24,1579	0/0:50,0:28:79.15:0,79,3408	0/0:54,0:29:71.16:0,71,3468	0/0:16,6:23:2.65:0,3,13	0/0:29,0:30:81.28:0,81,4486	0/0:44,0:44:99:0,117,6322	0/0:53,0:52:99:0,132,6070	0/0:32,0:32:81.26:0,81,4887	1/1:14,15:29:36.60:1866,37,0	0/1:19,1:20:11.03:13,0,11	0/1:30,0:30:14.78:15,0,4020	0/0:41,0:41:99:0,117,6380	0/0:40,0:39:99:0,102,5828	0/0:34,0:34:90.23:0,90,4737	0/0:34,0:34:96.29:0,96,5070	0/0:38,0:39:81.15:0,81,4282	1/1:12,7:20:48.11:1378,48,0	0/0:18,0:16:40.95:0,41,2191	0/0:24,0:24:57.11:0,57,3091	0/0:72,0:75:99:0,192,10799	0/0:32,0:32:87.22:0,87,4487	0/0:21,0:21:45.14:0,45,2455	0/0:51,0:50:99:0,117,6429	0/0:11,0:11:27.56:0,28,1349	0/0:38,0:36:42.73:0,43,4545	0/0:21,0:20:45.14:0,45,2078	0/0:10,0:10:18.05:0,18,928
chr10	69260782	.	GTACAA	G	1447.94	PASS	AB=0.808;AC=8;AF=0.143;AN=56;BaseQRankSum=9.332;DP=828;FS=15.374;HRun=0;HaplotypeScore=203.2453;InbreedingCoeff=0.7291;MQ=63.16;MQ0=11;MQRankSum=-7.629;QD=16.84;ReadPosRankSum=0.439;VQSLOD=1.7077;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,7:13:11.61:80,12,0	0/0:9,0:9:27.09:0,27,899	0/0:50,0:36:99:0,103,3232	0/0:49,0:32:87.10:0,87,2536	0/1:6,10:16:0:0,0,0	0/0:27,0:28:81.75:0,82,2689	0/0:39,0:39:99:0,111,3626	0/0:55,0:55:99:0,159,4944	0/0:29,0:29:87.30:0,87,2883	1/1:16,9:24:60.20:1136,60,0	1/1:5,9:14:2.38:19,2,0	0/0:25,0:25:40.36:0,40,2190	0/0:38,0:38:99:0,111,3638	0/0:38,0:38:99:0,108,3486	0/0:35,0:35:99:0,99,3163	0/0:34,0:34:99:0,102,3380	0/0:31,1:32:73.90:0,74,2525	0/1:15,0:15:99:347,0,100	0/0:20,0:18:54.19:0,54,1793	0/0:20,0:20:57.67:0,58,1827	0/0:67,0:67:99:0,193,6228	0/0:29,0:29:86.66:0,87,2687	0/0:22,0:22:53.81:0,54,1587	0/0:46,0:44:99:0,123,3996	0/0:14,0:14:36.59:0,37,1130	0/0:36,0:34:96.31:0,96,2988	0/0:18,0:17:51.17:0,51,1452	0/0:7,0:7:21.06:0,21,624
chr10	69260783	.	TA	T	371.28	PASS	AB=0.841;AC=4;AF=0.074;AN=54;BaseQRankSum=9.122;DP=827;FS=13.370;HRun=1;HaplotypeScore=147.5948;InbreedingCoeff=0.6190;MQ=63.41;MQ0=11;MQRankSum=-7.231;QD=6.63;ReadPosRankSum=2.587;VQSLOD=-0.4677;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:12,4:13:0.23:0,0,0	0/0:9,0:9:27.09:0,27,432	0/0:49,0:36:99:0,103,1610	0/0:49,1:32:83.99:0,84,1204	./.	0/0:28,0:28:78.53:0,79,1290	0/0:39,0:39:99:0,111,1770	0/0:55,0:55:99:0,156,2414	0/0:29,0:29:87.30:0,87,1386	1/1:24,0:24:52.06:349,52,0	0/0:15,0:15:0.68:0,1,2	0/0:24,0:24:61.62:0,62,1046	0/0:38,0:38:99:0,111,1768	0/0:37,0:37:99:0,105,1662	0/0:35,0:35:99:0,99,1534	0/0:34,0:34:99:0,102,1628	0/0:30,0:30:77.13:0,77,1205	0/1:13,2:15:94:127,0,94	0/0:21,0:19:57.18:0,57,886	0/0:22,0:22:60.17:0,60,911	0/0:69,0:69:99:0,193,3014	0/0:29,0:29:84.27:0,84,1313	0/0:21,0:21:44.99:0,45,718	0/0:46,0:44:99:0,123,1958	0/0:13,0:13:33.11:0,33,526	0/0:37,0:35:99:0,99,1504	0/0:18,0:17:42.13:0,42,646	0/0:7,0:7:21.07:0,21,318
chr10	69260785	.	CAA	C	428.64	PASS	AB=1.000;AC=6;AF=0.107;AN=56;BaseQRankSum=8.804;DP=822;FS=0.679;HRun=2;HaplotypeScore=161.1025;InbreedingCoeff=0.8175;MQ=64.45;MQ0=9;MQRankSum=-7.877;QD=6.04;ReadPosRankSum=2.165;VQSLOD=0.2165;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:14,0:12:0:0,0,0	0/0:9,0:9:27.09:0,27,548	0/0:49,0:36:99:0,102,1923	0/0:46,1:33:85.82:0,86,1585	0/1:16,0:16:0:0,0,0	0/0:31,0:31:90.29:0,90,1705	0/0:39,0:39:99:0,114,2202	0/0:51,0:51:99:0,151,3006	0/0:29,0:29:87.30:0,87,1767	1/1:25,0:24:29.96:214,30,0	0/0:14,0:14:2.03:0,2,10	0/0:24,0:24:45.21:0,45,1315	0/0:39,0:39:99:0,114,2173	0/0:37,0:37:99:0,108,2101	0/0:35,0:35:99:0,102,2016	0/0:34,0:34:99:0,102,2054	0/0:31,0:31:55.80:0,56,1473	1/1:12,4:16:40.19:334,40,0	0/0:20,0:19:57.20:0,57,1151	0/0:22,0:22:63.62:0,64,1224	0/0:70,0:70:99:0,205,3935	0/0:28,0:28:80.86:0,81,1557	0/0:21,0:21:57.01:0,57,997	0/0:46,0:44:99:0,123,2432	0/0:13,0:13:36.53:0,37,665	0/0:33,1:33:60.68:0,61,1760	0/0:19,0:18:53.93:0,54,912	0/0:7,0:7:21.07:0,21,406
chr10	69261770	.	GA	G	880.67	PASS	AB=1.000;AC=16;AF=0.296;AN=54;BaseQRankSum=5.474;DP=311;FS=7.719;HRun=1;HaplotypeScore=53.3540;InbreedingCoeff=0.7843;MQ=94.31;MQ0=1;MQRankSum=-1.798;QD=11.90;ReadPosRankSum=-2.603;VQSLOD=0.6156;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:37.93:0,38,252	0/0:7,0:7:14.78:0,15,144	0/0:21,0:20:36.94:0,37,412	0/1:23,0:22:3.88:4,0,358	0/0:9,0:9:18.37:0,18,133	0/0:10,0:10:22.46:0,22,296	0/0:15,0:15:45.07:0,45,525	1/1:4,3:7:12.02:134,12,0	0/0:14,0:14:36.10:0,36,484	0/0:7,0:7:21.07:0,21,278	0/0:8,0:8:24.05:0,24,298	0/0:15,0:15:42.07:0,42,514	0/0:13,0:13:21.26:0,21,370	0/0:16,0:16:48.12:0,48,611	0/0:7,0:7:18.03:0,18,231	0/0:16,0:16:48.15:0,48,647	0/0:22,0:22:66.19:0,66,869	0/0:8,0:8:24.06:0,24,315	1/1:3,1:4:11.99:142,12,0	1/1:0,7:7:12.04:166,12,0	1/1:2,11:13:18.02:224,18,0	0/0:18,0:18:49.52:0,50,657	0/1:4,0:4:10.75:20,0,11	1/1:7,2:9:21.85:210,22,0	0/0:14,0:14:36.01:0,36,482	1/1:0,4:4:9.03:124,9,0	1/1:0,3:3:3.01:41,3,0	./.
chr10	69261771	.	A	AG	420.08	PASS	AB=1.000;AC=12;AF=0.222;AN=54;BaseQRankSum=2.587;DP=310;FS=1.944;HRun=9;HaplotypeScore=60.7031;InbreedingCoeff=0.5764;MQ=93.20;MQ0=1;MQRankSum=-1.845;QD=5.68;ReadPosRankSum=-2.675;VQSLOD=0.2248;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,13:16:27.07:299,27,0	0/0:6,0:6:5.98:0,6,52	0/0:22,0:19:29.72:0,30,248	0/1:23,0:22:9.06:9,0,196	1/1:5,5:10:12:132,12,0	0/0:10,0:10:23:0,23,183	0/0:12,0:12:26.97:0,27,228	1/1:6,0:6:3.54:42,4,0	0/0:14,0:14:32.96:0,33,281	0/0:8,0:8:17.99:0,18,156	0/0:8,0:8:14.92:0,15,130	0/0:15,0:15:32.99:0,33,285	0/0:12,0:13:26.01:0,26,213	0/0:16,0:16:38.87:0,39,324	0/0:7,0:7:17.96:0,18,151	0/0:15,0:15:44.99:0,45,391	0/0:22,0:22:56.94:0,57,489	0/0:8,0:8:17.98:0,18,156	0/0:4,0:4:5.13:0,5,14	0/0:7,0:7:6.22:0,6,17	0/0:13,0:13:8.60:0,9,24	0/0:18,0:19:47:0,47,391	0/1:5,0:5:18.85:19,0,20	1/1:10,0:10:6.38:56,6,0	0/0:13,0:13:32.95:0,33,280	0/0:4,0:4:4:0,4,10	1/1:4,0:4:0.35:16,0,0	./.
chr10	69262434	.	C	CG	14165.30	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-14.345;DP=633;FS=6.152;HRun=1;HaplotypeScore=55.4915;InbreedingCoeff=0.9997;MQ=81.37;MQ0=0;MQRankSum=-1.125;QD=40.13;ReadPosRankSum=-2.320;VQSLOD=4.3625;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,42:42:99:1753,117,0	0/0:10,0:10:30.10:0,30,389	0/0:16,0:16:42.11:0,42,513	0/0:16,0:16:39.12:0,39,499	1/1:1,15:16:45.15:673,45,0	0/0:21,0:21:61.05:0,61,752	0/0:31,0:31:87.24:0,87,1098	1/1:3,26:29:72.22:1035,72,0	0/0:22,0:22:63.20:0,63,818	1/1:0,17:17:51.17:763,51,0	1/1:0,11:11:33.11:493,33,0	0/0:25,0:25:75.23:0,75,959	0/0:11,0:11:33.11:0,33,428	0/0:22,0:22:63.20:0,63,818	0/0:21,0:21:63.20:0,63,818	0/0:23,0:23:69.21:0,69,879	0/0:28,0:28:78.25:0,78,1013	1/1:1,34:35:93.32:1393,93,0	1/1:3,27:30:84.20:1167,84,0	1/1:0,14:14:39.09:559,39,0	1/1:1,57:58:99:2288,154,0	0/0:18,0:18:54.18:0,54,699	1/1:0,9:9:27.09:404,27,0	1/1:0,41:41:99:1708,114,0	0/0:16,0:16:48.16:0,48,623	1/1:0,15:15:42.10:585,42,0	1/1:1,20:20:57.19:852,57,0	1/1:0,15:15:33.11:494,33,0
chr10	69262914	.	T	TCC	3627.36	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=3.617;DP=510;FS=1.972;HRun=8;HaplotypeScore=76.5703;InbreedingCoeff=0.9967;MQ=85.73;MQ0=0;MQRankSum=-4.172;QD=25.02;ReadPosRankSum=-1.805;VQSLOD=2.9931;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:69.15:0,69,757	0/0:15,0:15:42.10:0,42,463	0/0:24,0:24:60.12:0,60,641	0/0:11,0:12:26.74:0,27,275	0/0:21,0:21:54.12:0,54,602	0/0:13,0:13:36.10:0,36,401	0/0:24,0:24:57.10:0,57,615	1/1:5,11:17:26.52:319,27,0	0/0:26,0:26:78.19:0,78,859	0/0:21,0:21:44.92:0,45,500	0/0:19,0:19:39.06:0,39,434	0/0:13,0:13:33.08:0,33,368	0/0:14,0:14:30:0,30,393	0/0:18,0:18:42.10:0,42,468	0/0:24,0:24:66.16:0,66,736	0/0:13,0:13:36.09:0,36,401	0/0:25,0:25:63.15:0,63,702	0/0:15,0:15:45.12:0,45,502	1/1:6,8:15:23.55:317,24,0	1/1:0,10:13:26.02:322,26,0	1/1:2,15:20:40.60:550,41,0	0/0:16,0:16:39.08:0,39,434	1/1:4,6:12:16.43:170,16,0	1/1:3,15:21:36.12:552,36,0	0/0:21,0:21:59.88:0,60,638	1/1:3,9:14:26.95:352,27,0	1/1:4,15:23:44.40:617,44,0	1/1:1,9:10:27.09:429,27,0
chr10	69263215	.	A	AGAG	4307.09	PASS	AB=0.515;AC=8;AF=0.143;AN=56;BaseQRankSum=-2.814;DP=565;FS=1.398;HRun=0;HaplotypeScore=93.4239;InbreedingCoeff=0.7736;MQ=70.79;MQ0=3;MQRankSum=-0.452;QD=34.46;ReadPosRankSum=3.530;VQSLOD=5.5511;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,45:48:99:2301,104,0	0/0:9,0:9:21.07:0,21,391	0/0:10,0:7:14.26:0,14,142	0/0:18,0:16:25.05:0,25,291	1/1:0,20:22:52.97:1126,53,0	0/0:18,0:18:54.18:0,54,964	0/0:19,0:19:57.19:0,57,955	0/0:33,0:33:90.24:0,90,1272	0/0:15,0:15:45.13:0,45,698	0/1:1,0:13:2.26:74,0,2	0/1:1,0:20:12.65:89,0,13	0/0:14,0:14:36.12:0,36,671	0/0:25,0:25:75.14:0,75,1187	0/0:20,0:20:60.20:0,60,1062	0/0:18,0:18:54.15:0,54,885	0/0:17,0:17:45.11:0,45,655	0/0:37,0:37:99:0,111,1718	1/1:1,14:19:29.49:718,29,0	0/0:17,0:17:51.14:0,51,724	0/0:22,0:22:57.19:0,57,991	0/0:20,0:20:60.20:0,60,1039	0/0:13,0:13:36.10:0,36,585	0/0:16,0:16:48.16:0,48,831	0/0:38,0:38:99:0,111,1915	0/0:16,0:16:48.14:0,48,803	0/0:16,0:16:44.28:0,44,799	0/0:21,0:21:54.06:0,54,871	0/0:8,0:8:24.05:0,24,332
chr10	69263388	.	AT	A	2536.18	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=10.332;DP=494;FS=37.160;HRun=11;HaplotypeScore=52.9789;InbreedingCoeff=0.9397;MQ=72.45;MQ0=2;MQRankSum=-1.100;QD=19.36;ReadPosRankSum=1.701;VQSLOD=2.1966;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,18:19:47.94:394,48,0	0/0:7,0:7:18.05:0,18,192	0/0:16,0:11:4.65:0,5,14	0/0:15,1:13:14.61:0,15,100	1/1:0,31:31:83.88:690,84,0	0/0:14,1:16:14.29:0,14,341	0/0:15,2:17:14.45:0,14,359	0/0:22,0:22:54.13:0,54,569	0/0:21,0:21:60.11:0,60,628	1/1:0,18:19:55.95:445,56,0	1/1:4,33:37:83.85:689,84,0	0/0:14,0:14:42.08:0,42,430	0/0:19,0:19:48.12:0,48,510	0/0:15,0:15:45.11:0,45,480	0/0:20,0:20:57.14:0,57,607	0/0:14,0:14:39.08:0,39,408	0/0:16,1:17:26.48:0,26,487	1/1:0,25:25:59.93:493,60,0	0/0:18,1:20:29.32:0,29,501	0/0:22,0:23:54:0,54,558	0/0:6,0:6:18.05:0,18,192	0/0:18,0:18:26.37:0,26,458	0/0:12,0:12:11.45:0,11,320	0/0:11,0:11:33.08:0,33,351	0/0:17,0:17:42.08:0,42,428	0/0:14,0:14:27.07:0,27,288	0/0:21,1:22:32.49:0,32,544	0/0:6,0:6:12.03:0,12,128
chr10	69266365	.	GA	G	5907.14	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=14.567;DP=683;FS=11.726;HRun=6;HaplotypeScore=68.6020;InbreedingCoeff=0.9974;MQ=94.69;MQ0=0;MQRankSum=-7.048;QD=27.86;ReadPosRankSum=-0.421;VQSLOD=4.4307;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:75.21:0,75,944	0/0:12,0:12:33.09:0,33,413	0/0:31,0:31:80.85:0,81,1001	0/0:31,0:31:67.35:0,67,818	0/0:26,0:26:72.21:0,72,907	0/0:38,0:38:99:0,108,1377	0/0:24,0:24:69.21:0,69,882	1/1:2,37:39:99:1145,111,0	0/0:26,0:26:78.24:0,78,989	0/0:26,0:26:75.23:0,75,939	0/0:22,0:22:66.18:0,66,812	0/0:24,0:24:69.22:0,69,897	0/0:34,0:34:87.25:0,87,1084	0/0:24,0:24:66.19:0,66,831	0/0:24,0:24:66.19:0,66,830	0/0:19,0:19:54.18:0,54,702	0/0:15,0:15:42.12:0,42,531	0/0:18,0:18:54.09:0,54,637	1/1:1,22:23:66.13:686,66,0	1/1:1,19:20:48.05:500,48,0	1/1:0,13:13:33.08:354,33,0	0/0:21,0:21:54.18:0,54,702	1/1:2,19:22:47.05:488,47,0	1/1:0,32:32:87.22:933,87,0	0/0:27,0:27:78.25:0,78,1013	1/1:3,26:29:78.20:836,78,0	1/1:2,26:28:75.19:804,75,0	1/1:1,5:6:15.04:161,15,0
chr10	69269408	.	TATGA	T	434.55	PASS	AB=0.904;AC=8;AF=0.143;AN=56;BaseQRankSum=9.398;DP=664;FS=50.639;HRun=0;HaplotypeScore=190.3533;InbreedingCoeff=-0.1434;MQ=52.61;MQ0=1;MQRankSum=-7.208;QD=2.09;ReadPosRankSum=-1.778;VQSLOD=1.0337;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:45.58:0,46,1162	0/1:5,3:8:49.46:49,0,289	0/0:21,0:18:36.40:0,36,1162	0/0:28,0:23:48.51:0,49,1459	0/1:23,3:26:0.80:1,0,1278	0/0:31,0:31:72.74:0,73,2242	0/0:20,0:20:60.16:0,60,1410	0/1:33,0:32:99:181,0,864	0/0:26,0:26:63.68:0,64,1671	0/0:33,1:34:13.18:0,13,2239	0/1:21,1:22:4.38:4,0,1450	0/0:25,0:25:64.12:0,64,1633	0/0:18,0:18:48.64:0,49,1313	0/0:28,0:28:72.23:0,72,1690	0/0:35,0:35:99:0,100,2580	0/0:37,0:37:92.29:0,92,2355	0/0:16,0:16:45.15:0,45,1200	0/0:13,0:13:36.12:0,36,932	0/0:20,0:20:51.63:0,52,1246	0/1:29,2:31:3.47:3,0,1612	0/0:15,0:15:28.34:0,28,755	0/1:22,4:26:99:134,0,1309	0/0:22,1:23:57.67:0,58,1485	0/0:18,0:18:42.10:0,42,1025	0/1:36,5:41:99:121,0,1976	0/1:20,1:21:62.11:62,0,1201	0/0:23,0:23:69.11:0,69,1734	0/0:7,0:7:21.07:0,21,588
chr10	69269443	.	A	AT	517.04	PASS	AB=0.797;AC=4;AF=0.071;AN=56;BaseQRankSum=10.236;DP=803;FS=69.927;HRun=0;HaplotypeScore=194.9527;InbreedingCoeff=-0.0937;MQ=56.92;MQ0=0;MQRankSum=-7.509;QD=4.50;ReadPosRankSum=-6.053;VQSLOD=-0.1529;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:69.19:0,69,941	0/1:6,3:9:99:115,0,224	0/0:32,0:31:47.73:0,48,989	0/0:27,0:24:50.67:0,51,875	0/0:14,6:21:0.61:0,1,440	0/0:34,0:34:99:0,102,1402	0/0:27,0:28:75.22:0,75,1044	0/0:41,0:39:99:0,111,1530	0/0:27,0:27:78.25:0,78,1070	0/0:38,3:41:63.40:0,63,1419	0/0:28,2:30:25.42:0,25,851	0/0:28,0:28:84.28:0,84,1169	0/0:23,0:23:63.16:0,63,840	0/0:34,0:34:96.24:0,96,1297	0/0:49,0:49:99:0,138,1839	0/0:36,0:36:99:0,105,1444	0/0:23,1:24:55.90:0,56,868	0/0:18,0:18:30.30:0,30,608	0/0:20,0:20:57.17:0,57,766	0/0:17,3:20:3.36:0,3,592	0/0:27,0:27:63.17:0,63,857	0/1:21,11:32:99:121,0,620	0/0:22,8:30:18.95:0,19,809	0/0:26,0:26:51.03:0,51,747	0/1:31,12:43:99:331,0,960	0/1:28,3:31:58.97:59,0,941	0/0:27,0:27:78.10:0,78,1008	0/0:16,0:18:34.50:0,35,538
chr10	69269522	.	T	TGAGAGAGAGAGA	5899.13	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=1.557;DP=723;FS=3.089;HRun=0;HaplotypeScore=317.7264;InbreedingCoeff=0.8569;MQ=58.50;MQ0=3;MQRankSum=-5.337;QD=15.86;ReadPosRankSum=-6.791;VQSLOD=1.8851;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:21,8:31:7.93:310,8,0	0/0:11,0:11:9.56:0,10,350	1/1:33,0:24:3.63:14,4,0	0/0:39,0:30:18.56:0,19,328	1/1:21,2:23:13.71:591,14,0	0/0:25,0:26:57.19:0,57,1745	0/0:13,0:14:33.08:0,33,882	1/1:34,0:29:27.41:498,27,0	0/0:26,0:27:59.36:0,59,1555	1/1:35,1:37:40.01:1353,40,0	1/1:18,1:22:5.85:199,6,0	0/0:24,0:25:51.17:0,51,1723	0/0:15,0:16:26.82:0,27,684	0/0:32,0:32:54.18:0,54,1845	0/0:33,0:33:51.17:0,51,1657	0/0:40,0:41:84.28:0,84,2473	0/0:25,0:25:43.17:0,43,1465	1/1:13,0:13:18.02:459,18,0	1/1:19,0:19:33.06:900,33,0	1/1:19,0:19:4.27:143,4,0	1/1:20,0:19:6.02:141,6,0	0/0:24,0:27:38.63:0,39,1144	1/1:23,0:23:2.68:206,3,0	1/1:37,0:37:8.78:71,9,0	0/0:34,0:34:49.79:0,50,1465	1/1:33,0:30:16.86:376,17,0	1/1:20,0:19:15.05:461,15,0	1/1:5,0:8:6.02:177,6,0
chr10	69270227	.	AAG	A	383.27	PASS	AB=0.944;AC=9;AF=0.161;AN=56;BaseQRankSum=5.153;DP=551;FS=34.158;HRun=0;HaplotypeScore=94.4394;InbreedingCoeff=0.1473;MQ=70.79;MQ0=8;MQRankSum=-3.035;QD=2.56;ReadPosRankSum=-0.401;VQSLOD=0.3572;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:24,1:25:57.34:57,0,128	0/0:11,0:11:32.63:0,33,349	0/0:32,0:17:24.78:0,25,298	0/0:34,0:23:6.58:0,7,258	0/1:20,1:21:65.96:66,0,109	0/0:15,0:15:35.84:0,36,418	0/0:19,0:19:42.06:0,42,478	0/0:22,0:21:22.42:0,22,300	0/0:11,0:11:15.24:0,15,180	0/1:18,0:17:8.33:8,0,188	0/0:13,0:12:16.94:0,17,164	0/0:23,0:23:18.55:0,19,409	0/0:19,0:19:39.34:0,39,486	0/0:24,0:24:51.77:0,52,594	0/0:20,0:19:38.72:0,39,332	0/0:13,0:13:34.22:0,34,383	0/0:37,0:35:39.97:0,40,758	1/1:12,4:15:9.73:159,10,0	0/0:17,1:16:27.90:0,28,209	0/1:15,1:16:26.21:26,0,175	0/0:18,1:19:13.66:0,14,317	0/0:14,0:14:28.36:0,28,227	0/1:11,0:11:3.31:3,0,92	0/1:10,3:12:1.50:78,0,1	0/0:22,0:22:31.42:0,31,513	0/0:17,0:16:33.64:0,34,277	0/1:28,2:30:99:122,0,135	0/0:18,0:18:18.31:0,18,138
chr10	69271111	.	AGT	A	94.34	PASS	AB=0.949;AC=12;AF=0.240;AN=50;BaseQRankSum=0.561;DP=581;FS=4.787;HRun=0;HaplotypeScore=97.4581;InbreedingCoeff=0.0429;MQ=55.29;MQ0=14;MQRankSum=0.278;QD=0.46;ReadPosRankSum=-0.437;VQSLOD=1.6571;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:32:5.68:0,6,77	0/1:6,0:7:5.09:5,0,60	./.	./.	0/0:17,0:17:5.66:0,6,52	0/1:16,0:16:17.47:17,0,153	0/1:28,1:29:8.56:9,0,248	0/0:24,0:22:14.97:0,15,144	0/0:15,0:15:6:0,6,65	1/1:11,3:14:3:33,3,0	1/1:12,1:14:11.83:94,12,0	0/1:21,1:22:11.57:12,0,220	0/0:13,0:13:6.01:0,6,63	0/0:21,0:21:12.04:0,12,168	0/0:19,0:19:3.01:0,3,45	0/1:15,3:18:14.60:15,0,179	0/1:41,3:44:26.13:26,0,394	0/0:19,0:18:27.04:0,27,351	0/0:16,0:14:11.99:0,12,110	0/0:16,0:15:3:0,3,26	0/1:28,0:28:0:0,0,0	0/0:13,0:13:15.01:0,15,198	0/0:18,0:16:2.96:0,3,26	./.	0/1:12,2:14:17.77:18,0,155	0/0:24,0:23:35.75:0,36,280	0/0:15,0:15:14.91:0,15,120	0/0:13,0:13:23.95:0,24,226
chr10	69271340	.	CA	C	1548.82	PASS	AB=0.882;AC=14;AF=0.250;AN=56;BaseQRankSum=8.544;DP=498;FS=6.372;HRun=11;HaplotypeScore=52.1960;InbreedingCoeff=0.5892;MQ=67.75;MQ0=1;MQRankSum=0.732;QD=9.50;ReadPosRankSum=1.238;VQSLOD=2.1405;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,21:24:58.97:474,59,0	0/1:6,2:8:6.77:7,0,124	0/0:14,0:11:6.90:0,7,174	0/0:6,0:6:9:0,9,84	1/1:7,18:26:25.58:415,26,0	0/0:23,2:25:19.93:0,20,614	0/0:19,1:21:35.32:0,35,551	0/1:16,1:17:7.17:7,0,335	0/0:14,0:14:42.11:0,42,448	1/1:3,12:15:37.97:299,38,0	1/1:5,17:22:18.90:356,19,0	0/0:20,0:20:48.12:0,48,512	0/0:14,0:14:33.08:0,33,352	0/0:11,0:11:24.06:0,24,256	0/0:15,0:15:5.74:0,6,250	0/0:17,0:17:27.89:0,28,431	0/0:26,0:26:69.11:0,69,704	1/1:1,9:10:17.95:148,18,0	0/1:16,3:21:17.24:17,0,402	0/0:21,0:22:47.95:0,48,491	0/0:16,1:18:26.27:0,26,456	0/0:22,0:23:49.22:0,49,489	0/0:16,1:19:11.91:0,12,456	0/0:17,1:18:17.46:0,17,391	0/1:17,2:20:4.31:4,0,354	0/0:22,0:22:51.13:0,51,544	0/0:17,2:20:2.13:0,2,399	0/0:10,0:10:30.08:0,30,320
chr10	69276441	.	C	CTG	701.84	PASS	AB=0.879;AC=19;AF=0.396;AN=48;BaseQRankSum=-4.379;DP=651;FS=0.000;HRun=0;HaplotypeScore=120.0605;InbreedingCoeff=-0.0077;MQ=65.42;MQ0=31;MQRankSum=0.904;QD=2.03;ReadPosRankSum=-1.449;VQSLOD=1.8843;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:42,0:43:8.53:17,0,9	0/0:10,0:9:5.96:0,6,50	./.	./.	./.	1/1:18,0:18:2.99:23,3,0	1/1:23,0:21:11.97:128,12,0	1/1:29,0:28:1.55:4,2,0	0/1:10,7:19:31.24:31,0,83	0/0:18,0:20:8.52:0,9,42	./.	0/1:16,9:26:15.30:79,0,15	1/1:21,2:22:1.78:198,2,0	0/1:21,2:23:37.10:111,0,37	0/1:16,3:19:34.35:35,0,34	1/1:16,0:15:6:62,6,0	0/1:24,14:36:60.98:61,0,174	0/0:10,0:18:17.16:0,17,92	0/0:17,0:18:2.84:0,3,14	0/0:15,0:16:3.31:0,3,15	0/0:28,0:31:5.85:0,6,46	0/0:22,0:22:2.60:0,3,29	0/1:12,0:13:11.09:11,0,19	0/0:25,0:34:31.62:0,32,153	0/1:21,0:18:16.69:83,0,17	0/1:26,0:30:4.06:4,0,28	0/0:10,0:18:8.39:0,8,42	0/0:11,0:15:8.67:0,9,52
chr10	69276589	.	ATGTTGTTGTTGT	A	3859.57	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=4.649;DP=669;FS=0.000;HRun=0;HaplotypeScore=219.9857;InbreedingCoeff=0.8252;MQ=64.28;MQ0=10;MQRankSum=-7.467;QD=19.30;ReadPosRankSum=0.953;VQSLOD=2.4885;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:78.20:0,78,3553	0/0:9,0:10:3.01:0,3,157	0/0:27,0:13:0:0,0,0	0/0:26,0:15:0:0,0,0	0/0:25,0:25:27.09:0,27,1102	0/0:13,0:18:15.05:0,15,459	0/0:22,0:22:30.10:0,30,1524	1/1:26,0:25:3.01:47,3,0	0/0:23,0:23:48.16:0,48,2513	0/0:20,0:30:48.16:0,48,2196	0/0:14,0:21:39.13:0,39,1725	0/0:34,0:34:60.21:0,60,3068	0/0:10,0:22:36.12:0,36,1114	0/0:34,0:34:51.18:0,51,2812	0/0:13,0:28:42.13:0,42,1988	0/0:19,0:19:42.14:0,42,2315	0/0:29,0:29:60.21:0,60,3266	0/0:21,0:22:48.11:0,48,2429	1/1:18,3:21:9.03:309,9,0	1/1:14,3:17:12.04:412,12,0	1/1:31,0:31:12.02:240,12,0	0/0:20,0:20:21.06:0,21,868	1/1:15,6:21:12:329,12,0	1/1:23,6:29:3.12:200,3,0	0/0:20,0:25:27.07:0,27,1028	1/1:14,13:27:33.09:986,33,0	1/1:6,12:18:33.11:1132,33,0	1/1:5,5:10:6.02:206,6,0
chr10	69277400	.	AT	A	1903.83	PASS	AB=0.714;AC=23;AF=0.411;AN=56;BaseQRankSum=4.445;DP=581;FS=7.567;HRun=13;HaplotypeScore=87.9538;InbreedingCoeff=0.7237;MQ=61.49;MQ0=12;MQRankSum=0.514;QD=7.05;ReadPosRankSum=0.877;VQSLOD=2.4659;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,20:23:30.84:311,31,0	0/0:6,0:6:14.98:0,15,135	0/0:10,0:7:5.47:0,5,31	0/0:13,0:10:5.99:0,6,51	0/1:3,10:13:6.26:114,0,6	0/0:9,1:11:17.82:0,18,146	0/0:27,2:30:24.78:0,25,413	0/1:16,14:32:6.49:303,0,6	0/0:22,0:21:23.88:0,24,199	1/1:6,1:21:31.79:106,32,0	1/1:4,0:14:13.77:40,14,0	0/0:19,1:20:14.09:0,14,280	0/0:31,0:32:50.82:0,51,441	0/1:22,2:23:13.92:14,0,173	0/0:27,1:29:22.94:0,23,357	0/0:27,0:26:20.11:0,20,348	0/0:26,2:26:10.68:0,11,409	1/1:4,0:17:22.39:66,22,0	1/1:13,15:28:4.90:295,5,0	1/1:8,10:19:15.11:195,15,0	1/1:3,11:14:17.60:131,18,0	0/0:18,1:18:17.01:0,17,299	0/0:16,2:18:13.49:0,13,250	0/0:23,0:21:17.01:0,17,159	0/0:23,0:23:43.77:0,44,407	1/1:5,13:20:36.80:246,37,0	1/1:6,20:27:10.64:223,11,0	1/1:2,6:8:10.95:67,11,0
chr10	69278828	.	A	AG	4766.88	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=15.246;DP=653;FS=2.196;HRun=0;HaplotypeScore=69.0491;InbreedingCoeff=0.9985;MQ=83.22;MQ0=0;MQRankSum=-1.789;QD=39.72;ReadPosRankSum=0.670;VQSLOD=5.3674;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,33:35:92.30:1324,92,0	0/0:8,0:8:24.08:0,24,335	0/0:23,0:23:63.18:0,63,824	0/0:22,0:22:60.11:0,60,797	1/1:0,29:29:81.22:1136,81,0	0/0:24,0:24:72.24:0,72,1005	0/0:24,0:24:72.23:0,72,992	0/0:28,0:28:81.27:0,81,1133	0/0:26,0:26:78.26:0,78,1087	1/1:1,26:27:81.27:1167,81,0	1/1:0,21:21:60.20:842,60,0	0/0:18,0:18:54.17:0,54,738	0/0:19,0:19:57.18:0,57,777	0/0:26,0:26:78.25:0,78,1074	0/0:25,0:25:75.25:0,75,1046	0/0:26,0:26:78.26:0,78,1091	0/0:13,0:13:39.13:0,39,546	1/1:1,7:8:21.07:298,21,0	0/0:13,0:13:36.12:0,36,504	0/0:26,0:26:78.26:0,78,1091	0/0:29,0:29:87.28:0,87,1198	0/0:29,0:29:87.29:0,87,1217	0/0:18,0:18:54.18:0,54,755	0/0:12,0:12:36.12:0,36,503	0/0:30,0:30:90.30:0,90,1256	0/0:33,1:34:53.09:0,53,1243	0/0:45,0:45:99:0,129,1803	0/0:15,0:15:45.15:0,45,629
chr10	69282575	.	CCT	C	4497.62	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=12.108;DP=749;FS=0.375;HRun=0;HaplotypeScore=87.4760;InbreedingCoeff=0.9729;MQ=87.88;MQ0=0;MQRankSum=-2.295;QD=35.41;ReadPosRankSum=2.913;VQSLOD=7.1854;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,34:38:96.32:1341,96,0	0/0:4,0:4:9.03:0,9,162	0/0:29,0:29:81.25:0,81,1399	0/0:25,0:25:66.69:0,67,1109	1/1:2,14:16:39.13:546,39,0	0/0:27,0:27:78.25:0,78,1366	0/0:35,0:35:99:0,99,1671	0/0:45,0:45:99:0,114,1914	0/0:32,0:32:90.26:0,90,1532	1/1:2,33:35:96.29:1309,96,0	1/1:1,16:17:45.15:630,45,0	0/0:30,0:30:90.31:0,90,1599	0/0:33,0:33:90.29:0,90,1573	0/0:31,0:31:93.32:0,93,1664	0/0:29,0:29:87.30:0,87,1567	0/0:22,0:22:60.21:0,60,1074	0/0:33,0:33:96.33:0,96,1705	1/1:1,20:21:48.16:672,48,0	0/0:13,0:13:33.11:0,33,594	0/0:15,0:15:42.14:0,42,756	0/0:50,0:50:99:0,141,2499	0/0:19,0:19:51.16:0,51,879	0/0:21,0:21:63.08:0,63,1095	0/0:52,0:52:99:0,153,2655	0/0:24,0:24:69.24:0,69,1232	0/0:23,1:24:24.19:0,24,1066	0/0:26,0:26:72.25:0,72,1269	0/0:3,0:3:9.03:0,9,162
chr10	69284257	.	AT	A	5440.44	PASS	AB=0.885;AC=19;AF=0.339;AN=56;BaseQRankSum=12.888;DP=600;FS=1.861;HRun=8;HaplotypeScore=60.9247;InbreedingCoeff=0.9196;MQ=83.46;MQ0=0;MQRankSum=-2.352;QD=23.45;ReadPosRankSum=-0.322;VQSLOD=5.3405;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:51.14:0,51,597	0/0:8,0:8:18.05:0,18,214	0/0:20,0:20:42.05:0,42,464	0/0:16,0:16:26.98:0,27,283	0/0:30,0:30:78.21:0,78,912	0/0:25,0:25:66.16:0,66,755	0/0:23,0:23:60.15:0,60,693	1/1:2,25:27:75.08:712,75,0	0/0:20,0:20:57.15:0,57,666	0/0:22,0:22:60.17:0,60,707	0/0:20,0:20:51.16:0,51,616	0/0:18,0:18:54.15:0,54,638	0/1:20,3:23:20.74:21,0,609	0/0:14,0:14:36.11:0,36,430	0/0:24,0:24:72.21:0,72,859	0/0:22,0:22:66.20:0,66,797	0/0:35,0:35:90.25:0,90,1069	0/0:23,0:23:57.16:0,57,677	1/1:1,20:21:57.07:545,57,0	1/1:0,17:17:48.08:464,48,0	1/1:2,24:26:69.11:666,69,0	0/0:16,0:16:48.14:0,48,571	1/1:4,20:24:51.08:493,51,0	1/1:3,19:22:57.09:550,57,0	0/0:13,0:13:36.11:0,36,435	1/1:0,23:23:69.08:658,69,0	1/1:2,22:24:66.10:636,66,0	1/1:1,24:25:72.12:695,72,0
chr10	69284581	.	GATTTATTTATTTATTTATTT	G	1001.88	PASS	AB=0.782;AC=10;AF=0.294;AN=34;BaseQRankSum=3.084;DP=246;FS=1.424;HRun=0;HaplotypeScore=126.3847;InbreedingCoeff=0.3285;MQ=69.06;MQ0=2;MQRankSum=-1.775;QD=14.11;ReadPosRankSum=-1.891;VQSLOD=2.2381;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:5,0:6:33.77:54,0,34	0/0:4,0:6:12.04:0,12,776	./.	./.	./.	0/0:7,0:10:12.04:0,12,604	./.	./.	0/0:3,0:6:3.48:0,3,62	0/0:10,0:14:15.05:0,15,570	0/0:10,0:12:3.01:0,3,101	0/0:4,0:7:3.01:0,3,262	0/0:4,0:4:3.01:0,3,241	./.	0/0:8,0:8:6.02:0,6,558	0/0:5,0:5:3.01:0,3,279	0/0:16,0:16:27.09:0,27,1927	0/1:7,0:12:50.62:53,0,51	1/1:14,3:17:6.02:318,6,0	./.	./.	./.	./.	./.	0/0:9,0:9:9.03:0,9,667	1/1:5,2:7:6.02:220,6,0	1/1:10,2:12:6.02:317,6,0	1/1:13,4:17:3.01:159,3,0
chr10	69289448	.	A	AC	2592.89	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-11.204;DP=774;FS=2.679;HRun=6;HaplotypeScore=71.6270;InbreedingCoeff=0.9998;MQ=92.15;MQ0=0;MQRankSum=-0.677;QD=32.41;ReadPosRankSum=0.890;VQSLOD=4.1086;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,120,1224	0/0:10,0:10:30.07:0,30,306	0/0:30,0:30:72.49:0,72,707	0/0:33,0:33:67.09:0,67,624	0/0:34,0:34:99:0,102,1034	0/0:30,0:30:78.15:0,78,788	0/0:29,0:29:78.17:0,78,796	0/0:25,0:25:66.11:0,66,656	0/0:33,0:33:93.18:0,93,940	1/1:2,28:30:81.23:1002,81,0	1/1:1,22:23:63.20:790,63,0	0/0:26,0:26:78.15:0,78,782	0/0:26,0:26:75.17:0,75,764	0/0:35,0:35:96.20:0,96,972	0/0:39,0:39:99:0,105,1070	0/0:25,0:25:72.16:0,72,734	0/0:20,0:20:51.11:0,51,520	1/1:0,27:27:75.24:944,75,0	0/0:21,0:21:42.08:0,42,428	0/0:31,0:31:87.18:0,87,879	0/0:21,0:21:60.13:0,60,612	0/0:30,0:30:87.17:0,87,874	0/0:33,0:33:99:0,99,1002	0/0:27,0:27:75.17:0,75,765	0/0:28,0:28:75.14:0,75,751	0/0:23,0:23:66.15:0,66,673	0/0:31,0:31:90.21:0,90,918	0/0:12,0:12:36.08:0,36,367
chr10	69290041	.	GA	G	8470.96	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=13.716;DP=666;FS=0.301;HRun=9;HaplotypeScore=67.2100;InbreedingCoeff=0.9933;MQ=72.89;MQ0=0;MQRankSum=0.740;QD=23.02;ReadPosRankSum=-0.247;VQSLOD=5.4441;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,36:38:99:933,102,0	0/0:9,0:9:27.08:0,27,312	0/0:14,0:14:21.52:0,22,227	0/0:16,1:17:32.19:0,32,322	1/1:5,26:31:71.77:643,72,0	0/0:25,0:25:72.20:0,72,819	0/0:23,0:23:60.16:0,60,682	1/1:8,38:47:99:1041,116,0	0/0:22,0:22:51.12:0,51,567	1/1:0,26:26:78.02:703,78,0	1/1:2,24:26:59.97:540,60,0	0/0:22,0:23:69.04:0,69,775	0/0:28,0:28:78.22:0,78,893	0/0:27,0:27:75.21:0,75,856	0/0:16,0:16:39.12:0,39,450	0/0:27,0:27:72.16:0,72,807	0/0:28,0:28:69.18:0,69,775	1/1:2,19:21:45.02:412,45,0	1/1:1,18:19:53.59:486,54,0	1/1:2,22:24:63.03:576,63,0	1/1:3,17:20:10.41:350,10,0	0/0:15,0:15:42.12:0,42,484	1/1:2,25:27:72.04:659,72,0	1/1:1,15:16:42.02:384,42,0	0/0:24,0:24:66.18:0,66,751	1/1:2,18:20:53.95:482,54,0	1/1:3,33:36:90.05:822,90,0	1/1:0,17:17:48.03:439,48,0
chr10	69290293	.	A	ATTCC	1323.94	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=-6.501;DP=684;FS=2.809;HRun=0;HaplotypeScore=110.5931;InbreedingCoeff=0.6793;MQ=63.86;MQ0=2;MQRankSum=-0.262;QD=24.52;ReadPosRankSum=-0.956;VQSLOD=3.5171;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:57.19:0,57,927	0/0:9,0:9:12.04:0,12,195	0/0:25,0:21:9.92:0,10,137	0/0:21,0:17:18.06:0,18,293	0/0:37,0:37:90.29:0,90,1437	0/0:13,0:13:27.08:0,27,416	0/0:25,0:25:63.21:0,63,1025	0/0:32,0:32:45.13:0,45,664	0/0:32,0:32:72.23:0,72,1148	0/0:31,0:31:63.21:0,63,1019	0/0:20,0:20:48.16:0,48,780	0/1:23,0:23:3.71:4,0,684	0/0:27,0:27:57.18:0,57,902	0/0:17,0:17:36.12:0,36,586	0/0:26,0:26:54.18:0,54,879	0/0:28,0:28:60.19:0,60,953	0/0:20,0:20:42.12:0,42,657	1/1:8,21:30:63.15:1418,63,0	0/0:13,0:13:24.08:0,24,386	0/0:32,0:32:70.48:0,70,1162	0/0:27,0:27:57.17:0,57,894	0/0:19,0:19:54.18:0,54,872	0/0:19,0:19:54.17:0,54,851	0/0:27,0:27:42.14:0,42,678	0/0:22,0:22:60.20:0,60,976	0/0:29,0:29:57.19:0,57,926	0/0:25,0:25:63.20:0,63,998	0/0:24,0:24:48.16:0,48,754
chr10	69291489	.	GT	G	8322.55	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=14.369;DP=691;FS=3.014;HRun=9;HaplotypeScore=77.6099;InbreedingCoeff=0.9965;MQ=70.71;MQ0=2;MQRankSum=-1.096;QD=22.93;ReadPosRankSum=1.663;VQSLOD=5.8150;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,37:40:55.60:807,56,0	0/0:17,0:17:51.15:0,51,589	0/0:38,0:22:17.80:0,18,227	0/0:28,0:16:21.25:0,21,175	1/1:6,30:36:84.02:766,84,0	0/0:22,0:22:60.18:0,60,692	0/0:22,0:22:48.13:0,48,546	1/1:3,20:23:60.01:543,60,0	0/0:10,0:10:24.07:0,24,277	1/1:2,20:22:60:541,60,0	1/1:1,24:25:66.02:603,66,0	0/0:21,0:21:57.16:0,57,648	0/0:25,0:25:72.21:0,72,830	0/0:17,1:18:20.67:0,21,491	0/0:25,0:25:72.18:0,72,810	0/0:21,0:21:60.18:0,60,692	0/0:27,2:29:20.29:0,20,741	1/1:2,26:28:34.42:569,34,0	1/1:2,19:21:25.40:482,25,0	1/1:2,27:29:78.04:714,78,0	1/1:0,14:14:39.02:357,39,0	0/0:26,0:27:78.04:0,78,859	1/1:2,13:15:32.93:302,33,0	1/1:2,16:18:45.02:412,45,0	0/0:25,0:25:72.16:0,72,816	1/1:3,32:35:99:905,99,0	1/1:3,40:43:99:961,105,0	1/1:1,13:14:39.03:360,39,0
chr10	69293497	.	T	TGTAGAAAGTTAGCTGTCAAAAACTCA	48689.69	PASS	AB=0.625;AC=55;AF=0.982;AN=56;BaseQRankSum=-1.422;DP=316;FS=17.086;HRun=0;HaplotypeScore=346.2550;InbreedingCoeff=-0.0365;MQ=61.05;MQ0=0;MQRankSum=-1.172;QD=154.08;ReadPosRankSum=2.555;VQSLOD=3.3274;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:16:41.17:3100,41,0	1/1:4,0:4:12.04:841,12,0	1/1:6,1:8:2.44:1519,2,0	0/1:4,0:9:20.07:1112,0,20	1/1:18,0:18:35.13:2526,35,0	1/1:10,0:10:17.99:1383,18,0	1/1:11,0:11:27.09:1713,27,0	1/1:11,0:11:30.10:2199,30,0	1/1:8,0:8:21.04:1322,21,0	1/1:27,0:27:69.24:5225,69,0	1/1:16,0:16:32.73:2488,33,0	1/1:14,0:14:33.10:1932,33,0	1/1:7,0:7:14.96:962,15,0	1/1:13,0:13:30.77:1981,31,0	1/1:16,0:15:29.75:1800,30,0	1/1:7,0:7:18.04:849,18,0	1/1:7,0:7:12.84:943,13,0	1/1:4,0:4:9.03:854,9,0	1/1:8,0:8:21.04:901,21,0	1/1:22,0:22:63.14:3502,63,0	1/1:6,0:6:5.98:92,6,0	1/1:19,0:19:51.16:2711,51,0	1/1:5,0:5:15.05:1157,15,0	1/1:9,0:9:18.06:831,18,0	1/1:16,0:16:42.06:2369,42,0	1/1:11,0:11:30.44:1952,30,0	1/1:8,0:8:21.07:1239,21,0	1/1:4,0:4:12.04:1185,12,0
chr10	69293498	.	G	GTAGAAAGTTAGCTGTCAAAAACTC	1980.64	PASS	AB=0.706;AC=24;AF=0.923;AN=26;BaseQRankSum=-0.273;DP=40;FS=8.468;HRun=0;HaplotypeScore=31.7939;InbreedingCoeff=-0.2427;MQ=117.09;MQ0=0;MQRankSum=-1.691;QD=66.02;ReadPosRankSum=-0.164;VQSLOD=0.7803;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	./.	./.	0/1:1,1:5:6.59:729,0,7	0/1:5,0:5:32.11:462,0,32	1/1:1,0:1:3.01:49,3,0	./.	./.	1/1:1,0:1:3.01:54,3,0	1/1:1,0:1:3.01:50,3,0	1/1:2,0:2:3.01:55,3,0	1/1:1,0:1:3.01:308,3,0	1/1:2,0:2:3:25,3,0	./.	./.	./.	./.	./.	./.	1/1:4,0:4:9:92,9,0	1/1:2,0:2:6.02:119,6,0	1/1:2,0:2:2.97:20,3,0	1/1:2,0:2:3.01:51,3,0	1/1:1,0:1:3.01:50,3,0	./.	./.	./.	./.	./.
chr10	69294920	.	C	CGT	4023.72	PASS	AB=0.674;AC=13;AF=0.232;AN=56;BaseQRankSum=-8.991;DP=644;FS=0.914;HRun=0;HaplotypeScore=90.5672;InbreedingCoeff=0.3011;MQ=65.83;MQ0=13;MQRankSum=-0.369;QD=15.66;ReadPosRankSum=-3.090;VQSLOD=2.9472;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:42:26.18:0,26,196	0/0:12,0:12:21.06:0,21,236	0/0:33,0:21:3.01:0,3,34	0/0:25,0:18:5.97:0,6,53	0/0:6,0:25:36.93:0,37,182	0/0:19,0:21:29.87:0,30,304	0/0:10,0:12:20.87:0,21,205	0/1:20,6:26:23.64:187,0,24	0/0:20,0:20:36.10:0,36,405	0/0:11,0:11:16.31:0,16,193	0/0:18,0:18:18.03:0,18,192	0/0:27,0:30:50.62:0,51,499	0/0:20,0:22:35.90:0,36,366	0/0:20,0:20:33.53:0,34,349	0/0:21,0:21:44.93:0,45,470	0/0:17,0:17:18.04:0,18,196	0/0:26,0:28:56.27:0,56,551	0/1:7,14:21:31.45:420,0,31	1/1:17,7:24:13.07:277,13,0	0/1:10,9:20:71.28:282,0,71	1/1:18,18:35:30.10:458,30,0	0/0:19,0:19:42.08:0,42,455	1/1:4,16:21:8.35:561,8,0	0/1:21,14:35:59.35:675,0,59	0/0:8,0:8:18.05:0,18,203	0/1:11,13:26:50.57:453,0,51	0/1:9,12:22:6.57:339,0,7	0/1:10,12:22:3.69:371,0,4
chr10	69295089	.	G	GA	14552.33	PASS	AB=0.821;AC=54;AF=0.964;AN=56;BaseQRankSum=-3.313;DP=367;FS=4.269;HRun=0;HaplotypeScore=53.8404;InbreedingCoeff=-0.0420;MQ=62.44;MQ0=0;MQRankSum=-1.164;QD=39.65;ReadPosRankSum=3.289;VQSLOD=5.3365;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,20:22:63.11:948,63,0	1/1:0,7:7:18.06:288,18,0	0/1:3,5:9:40.42:193,0,40	0/1:8,0:6:21.53:97,0,22	1/1:0,25:25:62.99:882,63,0	1/1:0,21:21:54.18:863,54,0	1/1:0,4:4:12.04:192,12,0	1/1:2,19:21:60.16:908,60,0	1/1:0,19:19:54.18:863,54,0	1/1:0,16:16:45.14:697,45,0	1/1:0,10:10:27.09:432,27,0	1/1:0,21:21:51.17:814,51,0	1/1:1,15:16:45.15:699,45,0	1/1:0,16:16:39.13:623,39,0	1/1:0,12:12:27.09:431,27,0	1/1:0,10:10:27.09:431,27,0	1/1:0,17:17:48.16:767,48,0	1/1:0,6:6:15.05:239,15,0	1/1:0,7:7:18.06:288,18,0	1/1:1,15:16:36.12:564,36,0	1/1:2,12:14:38.86:505,39,0	1/1:0,5:5:9.03:134,9,0	1/1:1,6:7:17.98:256,18,0	1/1:0,8:8:24.08:382,24,0	1/1:0,15:15:36.12:575,36,0	1/1:0,13:13:36.12:571,36,0	1/1:0,8:8:21.07:335,21,0	1/1:0,13:13:36.12:575,36,0
chr10	69295103	.	G	GC	1282.44	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=3.951;DP=321;FS=1.317;HRun=7;HaplotypeScore=87.9179;InbreedingCoeff=0.8452;MQ=64.48;MQ0=0;MQRankSum=-6.101;QD=12.82;ReadPosRankSum=-1.755;VQSLOD=2.8484;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:21:48.02:0,48,436	0/0:7,0:7:18.02:0,18,172	0/0:13,0:13:27.30:0,27,227	0/1:11,0:8:10.19:10,0,79	0/0:23,0:23:36:0,36,317	0/0:18,0:18:39.05:0,39,376	0/0:9,0:9:26.97:0,27,233	1/1:13,8:21:29.95:325,30,0	0/0:19,0:19:47.89:0,48,438	0/0:12,0:12:27.04:0,27,261	0/0:9,0:9:21.03:0,21,201	0/0:17,0:17:42.06:0,42,405	0/0:15,0:15:36.01:0,36,338	0/0:13,0:13:27.04:0,27,261	0/0:7,0:7:21.03:0,21,202	0/0:7,0:7:15.02:0,15,145	0/0:13,0:13:33.05:0,33,318	0/0:5,0:5:12.02:0,12,116	1/1:4,1:5:6.02:72,6,0	1/1:7,4:11:8.29:78,8,0	1/1:4,7:11:11.99:128,12,0	0/0:1,0:1:3:0,3,29	1/1:1,7:8:15.05:181,15,0	1/1:2,6:8:18.05:215,18,0	0/0:11,0:11:24.04:0,24,232	1/1:5,3:8:14.98:153,15,0	1/1:2,5:7:12.04:142,12,0	1/1:5,5:10:15.05:181,15,0
chr10	69295111	.	AC	A	544.49	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=2.743;DP=307;FS=0.000;HRun=7;HaplotypeScore=79.9394;InbreedingCoeff=0.8072;MQ=72.39;MQ0=0;MQRankSum=-4.502;QD=14.33;ReadPosRankSum=0.796;VQSLOD=3.3939;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,16:18:36.07:367,36,0	0/0:7,0:7:18.04:0,18,213	0/0:17,0:17:6.30:0,6,292	0/0:16,0:13:29.81:0,30,311	1/1:8,11:19:30.05:299,30,0	0/0:14,0:14:39.10:0,39,466	0/0:9,0:9:21.07:0,21,264	0/0:18,0:18:30:0,30,340	0/0:17,0:17:48.12:0,48,565	0/0:11,0:11:30.10:0,30,377	0/0:8,0:8:21.06:0,21,251	0/0:17,0:17:42.08:0,42,468	0/0:12,0:12:36.09:0,36,419	0/0:11,0:11:30.06:0,30,339	0/0:8,0:8:24.07:0,24,289	0/0:6,0:6:15.05:0,15,189	0/0:15,0:15:42.13:0,42,518	0/0:7,0:7:21.05:0,21,248	0/0:5,0:5:12.04:0,12,146	0/0:7,0:7:6.02:0,6,73	0/0:13,0:13:14.73:0,15,178	0/0:3,0:3:9.03:0,9,112	0/0:8,0:8:18:0,18,188	0/0:9,0:9:24.96:0,25,286	0/0:13,0:13:36.11:0,36,452	0/0:7,0:7:15.05:0,15,179	0/0:6,0:6:9.40:0,9,75	0/0:5,0:5:15.02:0,15,162
chr10	69295818	.	CGG	C	2107.78	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=2.690;DP=649;FS=13.177;HRun=8;HaplotypeScore=96.8020;InbreedingCoeff=0.8821;MQ=85.85;MQ0=0;MQRankSum=-3.105;QD=28.87;ReadPosRankSum=0.119;VQSLOD=2.1999;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,43:45:99:1425,117,0	0/0:11,0:11:30.09:0,30,476	0/0:30,0:30:74.63:0,75,1128	0/0:19,0:19:39.89:0,40,512	1/1:3,25:28:66.19:803,66,0	0/0:25,0:25:72.25:0,72,1217	0/0:19,0:19:48.14:0,48,762	0/0:8,0:27:59.99:0,60,571	0/0:30,0:30:87.26:0,87,1391	0/0:4,0:12:19.12:0,19,182	0/0:3,0:8:1.29:0,1,40	0/0:37,0:37:99:0,102,1665	0/0:37,0:37:99:0,99,1623	0/0:30,0:30:78.23:0,78,1238	0/0:28,0:29:83.75:0,84,1317	0/0:30,0:30:81.28:0,81,1370	0/0:18,0:18:51.15:0,51,810	0/0:6,0:21:42.06:0,42,402	0/0:4,0:11:18.03:0,18,180	0/0:3,0:12:23.97:0,24,219	0/0:15,0:26:20.27:0,20,188	0/0:21,0:21:60.17:0,60,933	0/0:1,0:18:18.47:0,18,175	0/0:6,0:21:33.52:0,34,331	0/0:25,0:25:66.21:0,66,1089	0/0:7,0:19:41.97:0,42,375	0/0:2,0:27:65.84:0,66,636	0/0:1,0:13:24:0,24,224
chr10	69299664	.	TTTC	T	2509.79	PASS	AB=0.972;AC=22;AF=0.393;AN=56;BaseQRankSum=9.686;DP=443;FS=29.196;HRun=0;HaplotypeScore=78.3273;InbreedingCoeff=0.4356;MQ=59.67;MQ0=11;MQRankSum=-2.123;QD=9.77;ReadPosRankSum=-4.292;VQSLOD=0.4113;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:20,0:20:55.34:69,0,55	0/0:8,0:8:23.78:0,24,311	0/0:17,0:7:11.78:0,12,129	0/1:19,0:9:1.90:2,0,170	0/1:16,0:16:16.42:68,0,16	0/0:13,0:13:36.11:0,36,681	0/0:15,0:13:36.07:0,36,579	1/1:32,2:33:62.91:572,63,0	0/0:13,0:13:39.10:0,39,571	0/1:15,0:15:28.50:140,0,28	0/1:14,0:12:7.60:8,0,48	0/0:11,0:11:22.29:0,22,434	0/0:13,0:13:33.06:0,33,550	0/0:12,0:12:36.12:0,36,683	0/0:14,0:14:39.12:0,39,739	0/0:11,0:11:33.09:0,33,583	0/0:34,0:33:99:0,99,1624	0/1:9,0:9:19.59:20,0,48	1/1:14,1:10:26.66:221,27,0	1/1:24,1:25:59.64:427,60,0	1/1:11,1:12:23.60:176,24,0	0/0:8,0:8:24.02:0,24,277	0/1:7,1:8:39.76:59,0,40	0/1:7,1:8:14.82:63,0,15	0/0:17,0:17:48.12:0,48,855	1/1:22,1:23:54.89:436,55,0	1/1:24,2:25:43.91:299,44,0	1/1:12,0:12:21.52:152,22,0
chr10	69299665	.	TTC	T	5119.85	PASS	AB=1.000;AC=27;AF=0.482;AN=56;BaseQRankSum=10.710;DP=444;FS=22.595;HRun=0;HaplotypeScore=62.8288;InbreedingCoeff=0.8953;MQ=59.66;MQ0=12;MQRankSum=-1.824;QD=21.33;ReadPosRankSum=-4.075;VQSLOD=2.3992;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:20:30.78:219,31,0	0/0:8,0:8:23.43:0,23,251	0/0:16,0:7:11.84:0,12,116	0/0:20,0:9:13.93:0,14,151	1/1:16,0:16:37.88:230,38,0	0/0:13,0:13:36.11:0,36,550	0/0:15,0:13:36.05:0,36,477	1/1:8,26:33:87.92:905,88,0	0/0:13,0:13:38.54:0,39,450	1/1:14,1:15:23.29:240,23,0	1/1:15,0:13:16.87:132,17,0	0/0:11,0:11:7.17:0,7,342	0/0:12,0:12:33.07:0,33,455	0/0:12,0:12:36.12:0,36,553	0/0:14,0:14:39.12:0,39,595	0/0:11,0:11:33.09:0,33,479	0/0:35,0:34:99:0,99,1329	1/1:9,0:9:2.56:109,3,0	1/1:8,7:9:27.07:350,27,0	1/1:4,21:25:62.91:726,63,0	1/1:1,11:12:24.08:350,24,0	0/0:8,0:8:24.01:0,24,250	0/1:8,0:8:4.23:75,0,4	1/1:8,0:8:10.94:123,11,0	0/0:16,0:16:48.09:0,48,690	1/1:16,7:23:65.87:700,66,0	1/1:4,24:27:50.96:664,51,0	1/1:4,8:12:24.01:296,24,0
chr10	69299666	.	TC	T	5313.13	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=10.021;DP=446;FS=22.250;HRun=1;HaplotypeScore=55.2082;InbreedingCoeff=0.9771;MQ=58.52;MQ0=11;MQRankSum=-3.364;QD=21.96;ReadPosRankSum=-3.773;VQSLOD=2.8275;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,5:19:48.83:501,49,0	0/0:8,0:8:17.94:0,18,188	0/0:15,0:7:11.26:0,11,89	0/0:18,0:8:16.79:0,17,140	1/1:9,7:16:45.03:482,45,0	0/0:13,0:13:36.10:0,36,429	0/0:15,0:13:36.05:0,36,390	1/1:30,4:33:90.27:764,90,0	0/0:13,0:13:38.42:0,38,374	1/1:12,3:15:37.71:384,38,0	1/1:13,3:14:36.93:359,37,0	0/0:11,0:11:7.02:0,7,252	0/0:12,0:12:33.06:0,33,366	0/0:12,0:12:36.11:0,36,435	0/0:14,0:14:39.11:0,39,460	0/0:11,0:11:33.08:0,33,380	0/0:35,0:34:83.15:0,83,1054	1/1:7,3:10:21.13:246,21,0	1/1:14,1:10:26.99:232,27,0	1/1:23,2:25:62.77:503,63,0	1/1:12,0:12:23.99:210,24,0	0/0:9,0:9:27.01:0,27,254	1/1:5,3:8:16.77:172,17,0	1/1:4,4:8:21.83:237,22,0	0/0:17,0:17:48.03:0,48,547	1/1:22,2:24:68.94:607,69,0	1/1:28,0:27:50.91:430,51,0	1/1:11,1:12:23.64:186,24,0
chr10	69299749	.	AT	A	3077.76	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=7.366;DP=410;FS=0.000;HRun=9;HaplotypeScore=55.8960;InbreedingCoeff=0.9765;MQ=73.61;MQ0=12;MQRankSum=-1.146;QD=20.80;ReadPosRankSum=0.774;VQSLOD=4.0901;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,26:25:69.04:631,69,0	0/0:7,0:7:18.05:0,18,208	0/0:23,0:11:20.97:0,21,211	0/0:31,0:18:24.10:0,24,224	1/1:0,11:11:33.02:302,33,0	0/0:10,0:10:21.06:0,21,242	0/0:21,0:21:54.12:0,54,608	1/1:2,14:15:42.02:384,42,0	0/0:10,0:8:21.06:0,21,242	0/0:9,0:9:24.07:0,24,277	0/0:16,1:18:47.97:0,48,534	0/0:15,0:15:33.07:0,33,367	0/0:11,0:11:23.81:0,24,254	0/0:8,0:8:21.01:0,21,219	0/0:15,0:14:33.10:0,33,381	0/0:15,0:15:33.10:0,33,381	0/0:28,0:26:69.20:0,69,795	0/0:12,0:10:23.97:0,24,258	1/1:2,6:8:15.33:160,15,0	1/1:5,9:14:32.96:294,33,0	1/1:1,5:6:15.01:136,15,0	0/0:13,0:13:39.11:0,39,442	1/1:2,11:12:30.02:275,30,0	1/1:3,14:16:31.67:347,32,0	0/0:16,0:16:39.12:0,39,450	1/1:1,12:12:36.02:329,36,0	1/1:4,9:13:26.99:247,27,0	1/1:4,7:10:6.47:195,6,0
chr10	69302619	.	A	AACAGAAACAC	16188.45	PASS	AB=0.595;AC=27;AF=0.482;AN=56;BaseQRankSum=10.979;DP=865;FS=0.000;HRun=0;HaplotypeScore=304.3003;InbreedingCoeff=0.9276;MQ=60.65;MQ0=3;MQRankSum=-13.791;QD=39.10;ReadPosRankSum=-11.064;VQSLOD=0.8667;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:37,10:48:90.45:1162,90,0	0/0:18,0:18:48.13:0,48,1182	0/0:32,0:22:57.03:0,57,1094	0/0:35,0:34:84.07:0,84,1716	1/1:10,22:32:50.87:327,51,0	0/0:27,0:27:69.16:0,69,1699	0/0:44,0:44:99:0,123,3140	1/1:35,0:34:99:2521,105,0	0/0:35,0:35:95.90:0,96,2715	1/1:12,0:41:99:2420,105,0	1/1:1,0:20:23.37:150,23,0	0/0:39,0:39:99:0,111,2732	0/0:27,0:27:72.10:0,72,1719	0/0:31,0:31:87.18:0,87,2223	0/0:36,0:36:90.17:0,90,2448	0/0:34,0:34:84.26:0,84,2347	0/0:45,0:45:99:0,126,3460	0/1:8,1:25:80.63:1278,0,81	1/1:23,2:23:47.76:1120,48,0	1/1:15,6:21:53.61:700,54,0	1/1:33,3:37:67.13:758,67,0	0/0:27,0:27:78.24:0,78,2156	1/1:15,6:20:38.61:548,39,0	1/1:24,8:32:24.92:152,25,0	0/0:21,0:21:60.08:0,60,1557	1/1:26,8:34:90.24:3097,90,0	1/1:4,27:33:30.02:1240,30,0	1/1:5,3:8:24.06:716,24,0
chr10	69302633	.	G	GAT	2588	PASS	AB=0.891;AC=12;AF=0.214;AN=56;BaseQRankSum=13.018;DP=849;FS=8.460;HRun=0;HaplotypeScore=199.3657;InbreedingCoeff=-0.0009;MQ=54.62;MQ0=5;MQRankSum=-5.502;QD=8.35;ReadPosRankSum=-0.419;VQSLOD=2.5010;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:39,8:46:79.73:326,0,80	0/0:16,0:16:48.08:0,48,662	0/0:34,0:20:56.18:0,56,743	0/0:30,0:27:72.66:0,73,1027	0/0:28,0:28:18.04:0,18,248	0/0:24,0:24:54.17:0,54,804	0/0:45,0:45:99:0,132,1905	0/1:38,8:46:99:637,0,880	0/0:38,0:38:97.70:0,98,1441	0/1:31,0:30:99:189,0,624	0/1:16,0:16:0:0,0,0	0/0:33,0:33:96.31:0,96,1440	0/0:28,0:28:75.20:0,75,1072	0/0:30,0:30:87.28:0,87,1303	0/0:40,0:40:99:0,103,1467	0/0:33,0:33:81.18:0,81,1127	0/0:52,0:52:99:0,137,1949	0/0:21,0:21:8.33:0,8,358	0/1:20,3:21:99:327,0,333	0/1:11,8:20:75.77:106,0,76	0/1:36,5:40:99:139,0,371	0/0:27,0:27:75.24:0,75,1126	0/1:17,2:19:98.89:99,0,137	0/0:33,5:38:14.59:0,15,196	0/0:22,0:22:60.19:0,60,895	0/1:20,7:28:99:706,0,171	0/1:31,0:29:27.59:28,0,231	1/1:6,1:7:17.01:184,17,0
chr10	69302664	.	G	GCA	733.57	PASS	AB=0.786;AC=5;AF=0.089;AN=56;BaseQRankSum=6.354;DP=829;FS=5.448;HRun=0;HaplotypeScore=193.5606;InbreedingCoeff=0.9048;MQ=51.43;MQ0=8;MQRankSum=-6.165;QD=12.43;ReadPosRankSum=1.435;VQSLOD=2.9927;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:47:42.09:0,42,538	0/0:13,0:13:36.12:0,36,458	0/0:28,0:9:23.39:0,23,248	0/0:33,0:12:27.08:0,27,322	0/0:22,0:22:18.06:0,18,231	0/0:22,0:22:54.16:0,54,679	0/0:37,0:37:96.27:0,96,1214	0/0:41,0:41:91.79:0,92,1124	0/0:33,0:33:80.83:0,81,995	1/1:14,13:27:46.34:704,46,0	0/1:8,3:11:0.14:0,0,1	0/0:32,0:32:93.24:0,93,1162	0/0:30,0:30:84.26:0,84,1060	0/0:37,0:37:90.25:0,90,1135	0/0:33,0:33:75.11:0,75,936	0/0:28,0:28:75.24:0,75,961	0/0:55,0:55:99:0,126,1601	1/1:16,0:21:18.38:148,18,0	0/0:23,0:22:47.83:0,48,600	0/0:18,0:18:14.94:0,15,193	0/0:61,0:59:81.27:0,81,1038	0/0:24,0:24:48.14:0,48,599	0/0:24,0:24:27.09:0,27,346	0/0:45,0:45:41.80:0,42,539	0/0:25,0:25:60.19:0,60,771	0/0:29,0:29:66.28:0,66,816	0/0:22,0:20:42.13:0,42,535	0/0:7,0:7:18.06:0,18,231
chr10	69302690	.	G	GCA	7975.64	PASS	AB=0.775;AC=21;AF=0.375;AN=56;BaseQRankSum=-9.953;DP=860;FS=2.782;HRun=0;HaplotypeScore=140.0592;InbreedingCoeff=0.3670;MQ=53.41;MQ0=15;MQRankSum=-0.097;QD=17.12;ReadPosRankSum=-0.093;VQSLOD=4.6574;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:15,40:55:50.80:984,0,51	0/0:11,0:11:24.03:0,24,266	0/0:32,0:12:15.04:0,15,180	0/1:46,0:14:64.78:65,0,67	1/1:15,4:19:27.08:403,27,0	0/0:26,0:28:71.71:0,72,813	0/0:34,0:36:78.04:0,78,896	1/1:22,17:39:48.14:978,48,0	0/0:24,0:24:57.56:0,58,712	0/1:10,0:22:16.78:17,0,64	0/1:3,0:9:8.87:18,0,9	0/0:33,0:36:83.64:0,84,885	0/0:28,0:31:83.74:0,84,935	0/0:37,0:37:99:0,99,1173	0/0:30,0:30:66.12:0,66,787	0/0:29,0:32:74.89:0,75,863	0/0:51,0:56:99:0,100,1487	0/1:7,0:22:30.28:30,0,130	1/1:9,18:22:20.91:772,21,0	0/1:4,14:20:9.32:338,0,9	0/1:19,47:69:34.50:1386,0,35	0/0:16,0:17:41.93:0,42,471	1/1:7,14:24:28.03:593,28,0	1/1:12,37:49:18.10:787,18,0	0/0:23,0:24:47.91:0,48,528	0/1:10,20:33:0.58:940,0,1	0/1:12,10:20:33.64:472,0,34	1/1:2,6:8:12.04:193,12,0
chr10	69304043	.	TG	T	4732.80	PASS	AB=0.933;AC=19;AF=0.339;AN=56;BaseQRankSum=11.557;DP=315;FS=9.330;HRun=5;HaplotypeScore=86.0193;InbreedingCoeff=0.8343;MQ=83.02;MQ0=0;MQRankSum=-5.971;QD=23.66;ReadPosRankSum=3.001;VQSLOD=3.4849;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:39.13:0,39,532	0/0:1,0:1:3.01:0,3,41	0/0:12,0:12:18.52:0,19,122	0/1:13,1:14:5.09:5,0,143	0/0:2,0:2:3.01:0,3,41	0/0:6,0:6:18.05:0,18,230	0/0:3,0:3:9.03:0,9,123	1/1:10,22:32:63.16:697,63,0	0/0:8,0:8:21.07:0,21,285	0/0:4,0:4:9.02:0,9,111	0/0:5,0:5:12.03:0,12,148	0/0:8,0:8:17.69:0,18,181	0/0:8,0:8:21.07:0,21,287	0/0:5,0:5:15.05:0,15,204	0/0:4,0:4:11.97:0,12,140	0/0:9,0:9:22.56:0,23,293	0/0:9,0:9:20.97:0,21,246	0/0:4,0:4:9:0,9,104	1/1:1,18:19:57.16:642,57,0	1/1:2,5:7:18.05:199,18,0	1/1:4,24:28:50.55:564,51,0	0/0:4,0:4:9.03:0,9,121	1/1:5,9:13:30.07:328,30,0	1/1:2,25:27:56.85:642,57,0	0/0:7,0:7:18.06:0,18,244	1/1:3,28:31:78.21:875,78,0	1/1:1,18:19:45.13:508,45,0	1/1:1,8:9:24.07:272,24,0
chr10	69305379	.	ATGTGTGTGTG	A	1605.13	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=5.540;DP=729;FS=13.589;HRun=0;HaplotypeScore=211.6861;InbreedingCoeff=0.8122;MQ=60.91;MQ0=13;MQRankSum=-4.399;QD=25.89;ReadPosRankSum=0.391;VQSLOD=2.1498;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:37:35.78:0,36,1391	0/0:7,0:8:12.04:0,12,539	0/0:43,0:20:5.85:0,6,106	0/0:45,0:27:3.48:0,3,46	0/0:32,0:31:30.10:0,30,1247	0/0:26,0:28:39.13:0,39,1792	0/0:21,0:21:24.06:0,24,934	0/0:52,0:51:81.24:0,81,2761	0/0:15,0:16:27.09:0,27,1231	1/1:18,9:27:24.08:658,24,0	1/1:9,6:18:27.09:637,27,0	0/0:25,0:25:45.14:0,45,1773	0/0:21,0:25:40.49:0,40,1642	0/0:18,0:19:42.13:0,42,1703	0/0:16,0:18:30.10:0,30,1341	0/0:16,0:17:33.58:0,34,1503	0/0:29,0:30:42.12:0,42,1696	1/1:8,9:17:15.52:448,16,0	0/0:26,0:26:32.91:0,33,999	0/0:25,0:24:18.06:0,18,649	0/0:38,0:37:9.03:0,9,307	0/0:22,0:24:48.15:0,48,2003	0/0:28,0:28:8.25:0,8,293	0/0:24,0:24:6.34:0,6,252	0/0:19,0:21:42.14:0,42,1918	0/0:34,0:34:34.47:0,34,1153	0/0:18,0:18:30.57:0,31,1048	0/0:12,0:12:9.50:0,10,399
chr10	69305395	.	G	GTGTA	1925.03	PASS	AB=0.960;AC=10;AF=0.179;AN=56;BaseQRankSum=-4.381;DP=809;FS=8.062;HRun=0;HaplotypeScore=166.4053;InbreedingCoeff=0.0256;MQ=52.76;MQ0=15;MQRankSum=-1.617;QD=6.55;ReadPosRankSum=2.581;VQSLOD=2.2186;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:51.80:0,52,479	0/0:11,0:11:24:0,24,299	0/0:36,0:14:26.58:0,27,212	0/0:42,0:22:43.06:0,43,429	0/0:31,0:30:63.60:0,64,585	0/0:32,0:32:74.86:0,75,878	0/0:21,0:21:47.99:0,48,523	0/1:47,0:45:99:396,0,249	0/0:16,0:16:47.94:0,48,590	0/0:28,0:28:68.70:0,69,612	0/0:21,0:21:41.68:0,42,342	0/0:31,0:30:77.87:0,78,894	0/0:29,0:29:72.38:0,72,693	0/0:26,0:26:59.50:0,60,752	0/0:25,0:25:60.01:0,60,749	0/0:23,0:23:57:0,57,728	0/0:34,0:34:74.65:0,75,760	0/0:15,0:15:23.99:0,24,226	0/1:23,0:22:99:132,0,109	1/1:35,1:35:35.65:427,36,0	0/1:39,0:36:86.19:86,0,92	0/0:32,0:32:80.95:0,81,879	0/1:35,0:35:39.12:157,0,39	0/1:15,12:28:53.22:181,0,53	0/0:27,0:27:66.52:0,67,836	0/1:44,0:44:99:390,0,222	0/1:25,0:25:99:232,0,152	0/1:17,0:16:50.32:75,0,50
chr10	69305397	.	G	GTA	1417.82	PASS	AB=0.834;AC=10;AF=0.179;AN=56;BaseQRankSum=-1.727;DP=804;FS=10.843;HRun=0;HaplotypeScore=141.6010;InbreedingCoeff=0.0257;MQ=52.70;MQ0=15;MQRankSum=0.555;QD=4.87;ReadPosRankSum=2.732;VQSLOD=2.5626;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:34.80:0,35,448	0/0:12,0:12:26.97:0,27,277	0/0:36,0:13:29.12:0,29,243	0/0:41,0:22:46.27:0,46,444	0/0:30,0:29:37.20:0,37,509	0/0:32,0:32:74.97:0,75,776	0/0:20,0:20:50.98:0,51,503	0/1:47,0:45:99:390,0,268	0/0:17,0:17:47.60:0,48,490	0/0:27,0:27:71.29:0,71,558	0/0:22,0:22:44.29:0,44,296	0/0:31,0:30:80.87:0,81,819	0/0:29,0:29:29.95:0,30,553	0/0:26,0:26:62.54:0,63,674	0/0:25,0:25:62.96:0,63,660	0/0:22,0:22:59.75:0,60,655	0/0:34,0:34:74.68:0,75,681	0/0:15,0:15:26.62:0,27,179	0/1:20,0:19:99:129,0,136	1/1:36,2:37:32.26:283,32,0	0/1:13,26:36:35.99:36,0,112	0/0:32,0:32:80.86:0,81,789	0/1:11,21:33:57.13:73,0,57	0/1:25,3:28:55.01:88,0,55	0/0:27,0:27:49.38:0,49,714	0/1:15,25:43:99:345,0,203	0/1:25,1:26:99:153,0,175	0/1:17,0:16:56.97:72,0,57
chr10	69305415	.	G	GTA	1834.32	PASS	AB=0.911;AC=13;AF=0.232;AN=56;BaseQRankSum=-0.209;DP=736;FS=0.821;HRun=0;HaplotypeScore=134.3967;InbreedingCoeff=0.4419;MQ=52.91;MQ0=11;MQRankSum=-2.593;QD=6.97;ReadPosRankSum=0.520;VQSLOD=3.5056;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:21.52:0,22,496	0/0:12,0:12:32.98:0,33,331	0/0:25,0:16:44.73:0,45,413	0/0:32,0:16:38.78:0,39,349	0/0:21,0:21:20.54:0,21,395	0/0:31,0:31:65.98:0,66,703	0/0:14,0:14:36.01:0,36,381	0/1:41,0:39:99:272,0,290	0/0:18,0:18:53.50:0,53,541	0/0:19,0:19:56.68:0,57,442	0/0:28,0:28:61.22:0,61,442	0/0:27,0:26:71.91:0,72,753	0/0:25,0:25:17.18:0,17,438	0/0:28,0:28:71.65:0,72,748	0/0:26,0:26:62.98:0,63,665	0/0:26,0:26:75.02:0,75,790	0/0:33,0:33:72.93:0,73,661	0/0:14,0:14:26.76:0,27,192	0/1:15,0:14:88:126,0,88	0/1:12,17:32:16.20:67,0,16	1/1:31,0:28:25.73:213,26,0	0/0:30,0:30:80.91:0,81,798	1/1:27,0:28:13.68:150,14,0	1/1:22,0:25:20.35:177,20,0	0/0:29,0:29:54.97:0,55,742	1/1:43,0:43:1.66:511,2,0	0/1:31,1:33:46.46:394,0,46	0/1:14,0:13:17.77:94,0,18
chr10	69307738	.	AC	A	1742.52	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.276;DP=719;FS=4.795;HRun=5;HaplotypeScore=68.1541;InbreedingCoeff=0.9985;MQ=90.05;MQ0=1;MQRankSum=-1.356;QD=27.23;ReadPosRankSum=-0.476;VQSLOD=3.5616;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,114,1533	0/0:7,0:7:21.07:0,21,284	0/0:26,0:25:66.17:0,66,844	0/0:31,0:31:71.20:0,71,990	0/0:18,0:18:51.17:0,51,697	0/0:25,0:25:66.22:0,66,903	0/0:21,0:21:57.17:0,57,758	0/0:23,0:22:60.20:0,60,820	0/0:27,0:27:78.24:0,78,1050	1/1:2,20:22:60.17:676,60,0	1/1:2,14:16:42.12:476,42,0	0/0:36,0:36:99:0,105,1417	0/0:35,0:35:99:0,102,1364	0/0:22,0:21:57.19:0,57,779	0/0:28,0:28:72.23:0,72,969	0/0:31,0:31:90.30:0,90,1228	0/0:35,0:35:99:0,102,1360	1/1:2,24:26:66.15:734,66,0	0/0:26,0:26:72.23:0,72,961	0/0:26,0:26:63.21:0,63,857	0/0:34,0:34:93.31:0,93,1272	0/0:21,0:21:63.18:0,63,827	0/0:28,0:28:84.26:0,84,1113	0/0:27,0:27:81.20:0,81,1053	0/0:20,0:20:60.20:0,60,814	0/0:19,0:19:54.17:0,54,722	0/0:30,0:30:87.29:0,87,1189	0/0:14,0:14:39.13:0,39,533
chr10	69307973	.	GTGGT	G	1741.63	PASS	AB=0.647;AC=17;AF=0.304;AN=56;BaseQRankSum=1.249;DP=555;FS=4.993;HRun=0;HaplotypeScore=145.4960;InbreedingCoeff=0.8013;MQ=76.39;MQ0=1;MQRankSum=-6.012;QD=16.13;ReadPosRankSum=-6.718;VQSLOD=1.7408;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,117,1417	0/0:7,0:7:9.97:0,10,164	0/0:16,0:16:42.08:0,42,572	0/0:22,0:22:58.34:0,58,767	0/0:15,0:15:27.29:0,27,509	0/0:23,0:23:60.13:0,60,727	0/0:27,0:27:66.17:0,66,789	1/1:0,17:17:24.91:285,25,0	0/0:22,0:21:48.12:0,48,564	0/0:20,0:20:60.03:0,60,893	0/0:14,0:14:18.98:0,19,575	0/0:33,0:33:77.61:0,78,932	0/0:29,0:29:66.19:0,66,785	0/0:28,0:28:72.03:0,72,834	0/0:34,0:34:96.13:0,96,1116	0/0:20,0:20:57.07:0,57,695	0/0:27,0:28:72.23:0,72,886	0/0:17,0:17:38.57:0,39,263	0/1:5,6:11:26.02:61,0,26	1/1:2,2:4:9.50:130,10,0	1/1:13,2:15:26.97:310,27,0	0/0:28,0:28:67.62:0,68,778	1/1:2,4:6:4.26:40,4,0	1/1:17,12:29:38.24:463,38,0	0/0:19,0:19:54.14:0,54,645	1/1:8,3:11:3.15:266,3,0	1/1:9,5:14:8.49:335,8,0	1/1:1,0:1:3.01:40,3,0
chr10	69307985	.	GGA	G	3885.48	PASS	AB=0.983;AC=34;AF=0.607;AN=56;BaseQRankSum=2.711;DP=571;FS=2.867;HRun=0;HaplotypeScore=117.2885;InbreedingCoeff=-0.1870;MQ=73.13;MQ0=1;MQRankSum=-0.953;QD=7.56;ReadPosRankSum=9.713;VQSLOD=2.3683;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:40,1:41:65.24:382,65,0	0/1:6,0:6:11.91:25,0,12	0/1:12,1:13:63.34:63,0,79	0/1:18,1:20:72.84:107,0,73	0/1:14,0:14:7.80:102,0,8	0/1:20,0:20:20.27:140,0,20	0/1:31,0:31:12.86:155,0,13	1/1:9,4:13:15.94:133,16,0	0/1:23,0:22:47.70:125,0,48	0/0:22,0:22:56.66:0,57,379	0/0:15,0:15:37.23:0,37,245	0/1:28,0:28:16.45:190,0,16	0/1:34,0:34:48.72:232,0,49	0/1:28,0:28:14.10:191,0,14	1/1:32,1:33:28.54:305,29,0	0/1:24,0:24:66.06:126,0,66	1/1:31,0:31:42.48:246,42,0	0/0:20,0:20:42.51:0,43,329	0/1:13,0:13:69.32:71,0,69	1/1:7,2:9:20.05:143,20,0	1/1:9,1:10:3.06:75,3,0	0/1:28,0:28:13.51:269,0,14	0/1:13,0:13:1.80:88,0,2	1/1:17,9:26:17.40:211,17,0	0/1:25,0:25:58:193,0,58	1/1:11,2:13:4.94:152,5,0	0/1:13,3:16:2.82:141,0,3	1/1:2,0:2:3.83:20,4,0
chr10	69308216	.	C	CG	9328.20	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-15.345;DP=742;FS=2.110;HRun=0;HaplotypeScore=68.8985;InbreedingCoeff=0.9579;MQ=84.23;MQ0=0;MQRankSum=-1.783;QD=43.39;ReadPosRankSum=1.540;VQSLOD=5.5270;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:56,0:56:99:0,163,2260	0/0:12,0:12:36.09:0,36,483	0/0:31,0:31:87.28:0,87,1199	0/0:21,0:21:59.99:0,60,741	0/0:26,0:26:75.25:0,75,1046	0/0:23,0:23:69.23:0,69,964	0/0:25,0:25:69.23:0,69,963	1/1:0,24:24:69.24:1096,69,0	0/0:29,0:29:87.27:0,87,1199	0/0:31,0:31:90.30:0,90,1259	0/0:30,0:30:87.29:0,87,1207	0/0:33,0:33:96.31:0,96,1327	0/0:24,0:24:69.22:0,69,946	0/0:31,0:31:93.31:0,93,1299	0/0:31,0:31:93.31:0,93,1300	0/0:25,0:25:75.25:0,75,1045	0/0:25,0:25:72.24:0,72,1006	0/0:22,0:22:66.22:0,66,922	1/1:0,20:21:63.21:985,63,0	1/1:0,22:22:60.20:957,60,0	1/1:1,30:31:84.29:1342,84,0	0/0:32,0:32:93.31:0,93,1285	1/1:0,32:32:86.68:1388,87,0	1/1:1,45:46:99:2061,129,0	0/0:20,0:20:57.18:0,57,779	1/1:2,13:15:0.15:541,0,0	1/1:0,18:18:42.14:670,42,0	1/1:0,6:6:18.06:288,18,0
chr10	69313594	.	GTCTGTCTATCTA	G	4112.27	PASS	AB=0.755;AC=12;AF=0.214;AN=56;BaseQRankSum=3.027;DP=748;FS=0.000;HRun=0;HaplotypeScore=253.1370;InbreedingCoeff=0.7167;MQ=60.26;MQ0=12;MQRankSum=1.266;QD=20.77;ReadPosRankSum=-4.398;VQSLOD=1.6915;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:30.93:0,31,228	0/0:8,0:8:21.03:0,21,711	0/0:30,0:19:35.30:0,35,310	0/0:23,0:16:35.34:0,35,285	0/0:29,0:29:35.37:0,35,290	0/0:30,0:30:54.03:0,54,904	0/0:16,0:16:38.81:0,39,456	1/1:43,0:40:99:861,102,0	0/0:29,0:29:81.04:0,81,2306	0/0:30,0:30:84.18:0,84,1639	0/0:27,0:27:56.53:0,57,810	0/0:36,0:35:77.89:0,78,1274	0/0:20,0:20:42.02:0,42,1003	0/0:25,0:25:48.02:0,48,1085	0/0:31,0:31:93.09:0,93,2762	0/0:36,0:36:83.93:0,84,1162	0/0:25,0:25:65.66:0,66,1560	0/0:20,0:20:54.01:0,54,1734	1/1:5,28:32:83.84:1312,84,0	1/1:0,39:39:10.92:113,11,0	0/1:19,0:19:56.73:191,0,57	0/0:27,0:27:57.42:0,57,1039	0/0:1,0:24:0.72:0,1,1	0/0:1,0:22:2.96:0,3,19	0/0:30,0:30:90.15:0,90,2887	0/1:1,27:28:2.47:1355,0,2	1/1:1,22:23:8.56:243,9,0	1/1:4,9:12:3.01:38,3,0
chr10	69313598	.	GTCTA	G	1683.99	PASS	AB=0.861;AC=23;AF=0.479;AN=48;BaseQRankSum=6.971;DP=731;FS=15.064;HRun=0;HaplotypeScore=169.1190;InbreedingCoeff=0.5655;MQ=59.02;MQ0=12;MQRankSum=-0.486;QD=4.63;ReadPosRankSum=-0.739;VQSLOD=1.7607;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:30:0.44:0,0,1	0/1:7,0:7:12.93:13,0,198	./.	./.	0/1:13,0:28:0.11:0,0,1	1/1:12,18:31:17.96:277,18,0	0/0:17,0:17:6.01:0,6,73	./.	0/1:27,1:28:10.04:10,0,619	0/1:16,13:29:41.62:440,0,42	1/1:15,13:28:14.73:200,15,0	0/0:24,0:39:15.02:0,15,207	0/0:12,0:22:15.04:0,15,234	0/0:14,0:23:12.03:0,12,179	0/0:31,0:31:8.66:0,9,856	1/1:21,16:37:14.94:201,15,0	0/0:24,0:24:24.05:0,24,453	0/0:19,0:19:33.03:0,33,544	1/1:35,0:34:23.58:194,24,0	1/1:39,0:39:6.17:26,6,0	1/1:18,0:18:13.24:111,13,0	0/0:15,0:25:12.79:0,13,214	0/1:23,0:23:0.14:0,0,1	./.	0/0:32,0:32:54.07:0,54,930	1/1:27,1:28:36.12:302,36,0	1/1:23,0:22:7.52:60,8,0	1/1:10,0:9:2.96:19,3,0
chr10	69313798	.	AC	A	7447.21	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=14.901;DP=653;FS=7.042;HRun=2;HaplotypeScore=62.7602;InbreedingCoeff=0.9996;MQ=75.15;MQ0=0;MQRankSum=-2.951;QD=34.64;ReadPosRankSum=0.501;VQSLOD=4.8556;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:99:0,108,1405	0/0:16,0:16:45.13:0,45,603	0/0:18,0:17:45.13:0,45,594	0/0:15,0:16:39.12:0,39,534	0/0:35,0:35:99:0,105,1443	0/0:30,0:30:90.26:0,90,1222	0/0:28,0:28:81.21:0,81,1059	1/1:0,32:32:96.24:1179,96,0	0/0:24,0:24:72.22:0,72,985	0/0:24,0:24:72.20:0,72,927	0/0:19,0:19:57.14:0,57,751	0/0:22,0:21:63.18:0,63,856	0/0:23,0:23:66.22:0,66,931	0/0:21,0:21:63.13:0,63,799	0/0:29,0:29:74.09:0,74,958	0/0:18,0:18:54.14:0,54,725	0/0:15,0:15:45.12:0,45,583	0/0:15,0:15:42.10:0,42,569	1/1:1,25:26:69.14:843,69,0	1/1:0,29:29:87.10:1044,87,0	1/1:0,18:18:42.14:538,42,0	0/0:19,0:19:57.16:0,57,771	1/1:2,24:26:75.19:934,75,0	1/1:1,10:11:24.08:310,24,0	0/0:29,0:29:87.29:0,87,1230	1/1:0,26:26:78.21:965,78,0	1/1:4,29:33:93.27:1169,93,0	1/1:1,13:14:36.12:464,36,0
chr10	69316952	.	AAGGAAG	A	4415.37	PASS	AB=0.888;AC=16;AF=0.296;AN=54;BaseQRankSum=8.029;DP=478;FS=22.282;HRun=0;HaplotypeScore=109.3572;InbreedingCoeff=0.6739;MQ=48.24;MQ0=24;MQRankSum=-3.432;QD=24.81;ReadPosRankSum=0.100;VQSLOD=2.9741;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:10:21.04:0,21,422	0/0:5,0:4:12.04:0,12,304	0/0:7,0:4:12.04:0,12,239	./.	0/0:15,0:14:26.96:0,27,470	0/0:23,0:22:55.07:0,55,1458	0/0:16,0:16:30.03:0,30,594	0/1:22,0:15:4.63:306,0,5	0/0:16,0:15:42.11:0,42,964	0/0:22,0:22:63.14:0,63,1508	0/0:18,0:18:48.16:0,48,1191	0/0:18,0:18:45.61:0,46,1079	0/0:23,0:21:51.12:0,51,1096	0/0:19,0:19:42.23:0,42,1211	0/0:19,0:19:47.95:0,48,1156	0/0:15,0:15:42.12:0,42,1013	0/1:21,0:13:7.40:7,0,509	0/0:21,0:20:48.12:0,48,1047	1/1:4,9:11:24.64:441,25,0	1/1:16,11:23:35.69:479,36,0	0/1:19,0:17:5.47:740,0,5	0/0:22,0:20:54.14:0,54,1169	1/1:6,11:15:8.89:117,9,0	1/1:14,0:12:19.69:286,20,0	0/0:24,0:24:54.09:0,54,1291	0/1:4,18:22:99:926,0,128	1/1:13,0:12:18.72:633,19,0	1/1:10,0:10:11.61:480,12,0
chr10	69316953	.	AG	A	1406.10	PASS	AB=0.944;AC=13;AF=0.241;AN=54;BaseQRankSum=11.335;DP=473;FS=4.860;HRun=2;HaplotypeScore=84.5463;InbreedingCoeff=0.5906;MQ=48.66;MQ0=17;MQRankSum=-3.153;QD=10.57;ReadPosRankSum=0.678;VQSLOD=1.7153;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:11:23.80:0,24,289	0/0:5,0:4:12.04:0,12,176	0/0:7,0:4:12.04:0,12,173	./.	0/0:15,0:14:35.69:0,36,481	0/0:21,2:22:49.91:0,50,787	0/0:14,2:16:3.57:0,4,446	0/0:18,2:15:10.49:0,10,349	0/0:16,0:15:45.15:0,45,645	0/0:22,0:22:62.80:0,63,888	0/0:18,0:18:47.61:0,48,676	0/0:18,0:18:54.18:0,54,774	0/0:22,1:22:52.92:0,53,697	0/0:19,0:19:57.16:0,57,803	0/0:19,0:19:51.04:0,51,711	0/0:16,0:16:45.13:0,45,627	0/0:20,0:13:0:0,0,256	0/0:20,0:19:33.21:0,33,618	0/1:12,1:11:24.21:143,0,24	1/1:22,4:23:40.58:210,41,0	0/1:17,2:17:47.04:266,0,47	0/0:22,0:20:55.50:0,56,834	1/1:13,4:15:6.11:30,6,0	1/1:8,5:12:25.03:160,25,0	0/0:24,0:24:63.21:0,63,891	0/1:22,0:22:32.98:275,0,33	1/1:7,6:12:35.26:274,35,0	1/1:6,4:10:26.67:223,27,0
chr10	69316954	.	G	GAA	1685.34	PASS	AB=0.983;AC=15;AF=0.278;AN=54;BaseQRankSum=11.920;DP=476;FS=2.629;HRun=2;HaplotypeScore=93.0592;InbreedingCoeff=0.4937;MQ=48.73;MQ0=16;MQRankSum=-3.070;QD=9.74;ReadPosRankSum=0.159;VQSLOD=0.5890;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:12:13.12:0,13,290	0/0:5,0:4:12.04:0,12,174	0/0:7,0:4:12.04:0,12,173	./.	0/0:15,0:14:34.93:0,35,473	0/0:24,0:23:48.35:0,48,752	0/0:16,0:16:3.27:0,3,451	0/1:21,0:16:10.93:11,0,414	0/0:16,0:15:45.15:0,45,665	0/0:23,0:23:63.21:0,63,913	0/0:18,0:18:47.07:0,47,675	0/0:18,0:18:54.17:0,54,787	0/0:23,0:22:51.48:0,51,645	0/0:19,0:19:57.16:0,57,808	0/0:19,0:19:50.96:0,51,710	0/0:16,0:16:45.13:0,45,655	0/1:20,0:13:8.52:9,0,230	0/0:20,0:19:33.21:0,33,626	0/1:13,0:11:24.24:146,0,24	1/1:20,6:23:46.45:345,46,0	0/1:19,0:17:44.78:247,0,45	0/0:22,0:20:54.81:0,55,851	1/1:16,0:14:5.65:31,6,0	1/1:12,1:12:26.96:208,27,0	0/0:24,0:24:62.33:0,62,898	0/1:20,2:22:40.76:349,0,41	1/1:13,0:12:35.22:282,35,0	1/1:10,0:10:26.66:235,27,0
chr10	69316956	.	AAG	A	1281.42	PASS	AB=0.954;AC=14;AF=0.259;AN=54;BaseQRankSum=10.167;DP=480;FS=17.547;HRun=0;HaplotypeScore=91.1777;InbreedingCoeff=0.5329;MQ=49.00;MQ0=16;MQRankSum=-2.560;QD=8.38;ReadPosRankSum=0.616;VQSLOD=1.9515;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:12:15.01:0,15,376	0/0:5,0:4:12.04:0,12,221	0/0:8,0:4:12.04:0,12,224	./.	0/0:15,0:14:33.11:0,33,573	0/0:25,0:24:65.35:0,65,1131	0/0:16,0:16:38.85:0,39,627	0/1:19,2:16:7.95:8,0,229	0/0:18,0:17:51.17:0,51,912	0/0:23,0:23:66.22:0,66,1185	0/0:19,0:19:51.17:0,51,943	0/0:18,0:18:51.17:0,51,927	0/0:25,0:24:63.17:0,63,1069	0/0:18,0:18:54.17:0,54,977	0/0:19,0:19:48.16:0,48,893	0/0:16,0:16:45.15:0,45,842	0/0:20,0:13:18.01:0,18,428	0/0:21,0:20:51.17:0,51,919	0/1:13,0:11:30.84:116,0,31	1/1:26,0:23:11.07:118,11,0	0/1:17,2:17:62.70:291,0,63	0/0:20,0:19:54.19:0,54,1011	1/1:16,0:14:4.67:23,5,0	1/1:9,3:12:3.92:107,4,0	0/0:23,0:23:63.21:0,63,1122	0/1:22,0:22:53.50:346,0,54	1/1:9,4:12:29.28:254,29,0	1/1:7,3:10:12.51:187,13,0
chr10	69316958	.	G	GA	1848.88	PASS	AB=0.950;AC=14;AF=0.259;AN=54;BaseQRankSum=10.762;DP=491;FS=6.646;HRun=2;HaplotypeScore=84.5252;InbreedingCoeff=0.5425;MQ=49.03;MQ0=17;MQRankSum=-2.254;QD=11.63;ReadPosRankSum=0.475;VQSLOD=1.7879;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:14:4.24:0,4,285	0/0:5,0:4:12.04:0,12,156	0/0:8,0:4:12.04:0,12,156	./.	0/0:15,0:14:33.10:0,33,403	0/0:25,1:25:51.15:0,51,788	0/0:17,1:18:28.66:0,29,431	0/1:21,1:17:37.48:37,0,352	0/0:18,0:17:51.08:0,51,639	0/0:23,0:23:66.21:0,66,854	0/0:19,0:19:51.17:0,51,661	0/0:18,0:18:51.16:0,51,656	0/0:25,0:24:62.84:0,63,757	0/0:18,0:18:54.18:0,54,700	0/0:19,0:19:48.16:0,48,623	0/0:16,0:16:45.15:0,45,584	0/0:20,0:13:28.88:0,29,305	0/0:21,0:20:51.17:0,51,661	0/1:12,1:11:30.98:136,0,31	1/1:19,9:25:44.32:331,44,0	0/1:20,0:18:32.42:331,0,32	0/0:19,0:18:54.18:0,54,701	1/1:13,3:14:6.85:40,7,0	1/1:11,2:12:5.66:173,6,0	0/0:24,0:24:63.20:0,63,800	0/1:20,2:22:15.08:454,0,15	1/1:13,1:13:30.86:313,31,0	1/1:10,0:10:23.87:209,24,0
chr10	69317619	.	CCACACACACACA	C	363.71	PASS	AC=12;AF=0.240;AN=50;BaseQRankSum=2.602;DP=473;FS=21.524;HRun=0;HaplotypeScore=146.4530;InbreedingCoeff=0.5461;MQ=74.71;MQ0=11;MQRankSum=-3.453;QD=3.43;ReadPosRankSum=-1.910;VQSLOD=1.1646;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:27:3.75:0,4,37	0/0:12,0:12:15.03:0,15,553	./.	./.	0/0:9,0:8:3:0,3,25	0/0:19,0:19:24.07:0,24,1137	0/0:18,0:19:15.05:0,15,642	0/0:24,0:24:4.06:0,4,11	0/0:18,0:19:24.55:0,25,1006	0/0:13,0:12:5.95:0,6,46	0/0:17,0:18:5.94:0,6,42	0/0:7,0:7:6.02:0,6,142	0/0:12,0:16:24.90:0,25,493	0/0:8,0:8:6.02:0,6,186	0/0:20,0:20:15.05:0,15,743	0/0:10,0:15:12.02:0,12,278	0/0:12,0:15:12.04:0,12,319	0/0:9,0:11:16.25:0,16,263	1/1:16,0:16:2.10:15,2,0	0/0:14,3:17:2.83:0,3,24	1/1:24,0:24:2.99:24,3,0	0/0:15,0:13:15.05:0,15,508	./.	1/1:20,6:25:6.02:186,6,0	0/0:12,0:12:6.02:0,6,266	1/1:18,0:17:2.90:26,3,0	1/1:12,2:14:3.01:102,3,0	1/1:4,2:7:5.38:145,5,0
chr10	69319129	.	AC	A	1808.34	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.021;DP=679;FS=8.770;HRun=6;HaplotypeScore=67.1819;InbreedingCoeff=0.9989;MQ=75.83;MQ0=1;MQRankSum=-4.387;QD=26.99;ReadPosRankSum=3.056;VQSLOD=4.0408;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,41:42:99:1193,111,0	0/0:9,0:9:27.07:0,27,341	0/0:23,0:23:53.88:0,54,574	0/0:12,0:12:26.92:0,27,276	1/1:2,23:25:69.17:737,69,0	0/0:19,0:19:54.18:0,54,709	0/0:32,0:32:90.28:0,90,1167	0/0:28,0:28:57.13:0,57,680	0/0:17,0:17:48.16:0,48,629	0/0:34,0:34:96.31:0,96,1250	0/0:19,0:19:48.12:0,48,598	0/0:19,0:19:54.15:0,54,679	0/0:31,0:31:90.24:0,90,1122	0/0:24,1:25:69.21:0,69,891	0/0:20,0:20:57.17:0,57,735	0/0:22,0:22:63.20:0,63,827	0/0:23,0:23:63.20:0,63,826	0/0:33,0:33:99:0,99,1299	0/0:22,0:22:63.18:0,63,787	0/0:24,0:24:69.18:0,69,851	0/0:37,0:36:99:0,102,1278	0/0:22,0:22:60.19:0,60,780	0/0:18,0:18:42.10:0,42,508	0/0:37,0:37:99:0,99,1297	0/0:25,0:25:69.22:0,69,902	0/0:26,0:26:72.20:0,72,893	0/0:16,0:15:48.15:0,48,617	0/0:19,0:19:57.19:0,57,750
chr10	69323918	.	C	CT	1175.39	PASS	AB=0.797;AC=7;AF=0.125;AN=56;BaseQRankSum=-6.926;DP=612;FS=3.999;HRun=11;HaplotypeScore=67.9322;InbreedingCoeff=0.4897;MQ=73.79;MQ0=0;MQRankSum=1.576;QD=9.88;ReadPosRankSum=-1.855;VQSLOD=2.5512;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:37:82.79:0,83,600	0/0:4,0:5:13.99:0,14,99	0/0:12,0:13:13.33:0,13,111	0/0:14,0:17:19.63:0,20,103	0/0:26,1:28:37.33:0,37,463	0/0:23,0:24:37.92:0,38,423	0/0:14,0:15:37.89:0,38,284	0/0:40,1:42:50.20:0,50,573	0/0:15,0:15:35.86:0,36,278	1/1:10,19:29:13.62:488,14,0	0/1:9,20:29:24.20:460,0,24	0/0:18,0:19:40.84:0,41,305	0/1:14,2:16:22.04:22,0,216	0/0:11,0:11:26.88:0,27,209	0/0:19,0:20:43.83:0,44,329	0/0:18,0:20:48.86:0,49,356	0/0:17,0:17:41.78:0,42,319	1/1:3,11:15:32.90:319,33,0	0/0:22,1:24:16.38:0,16,296	0/0:32,0:34:66.79:0,67,499	0/0:13,0:14:31.73:0,32,236	0/0:27,0:27:68.70:0,69,534	0/0:16,0:19:38.95:0,39,273	0/0:17,0:17:38.80:0,39,297	0/0:24,1:25:23.30:0,23,361	0/1:26,3:30:26.42:26,0,350	0/0:32,0:33:93.72:0,94,708	0/0:15,0:15:29.83:0,30,232
chr10	69324529	.	T	TAC	2931.98	PASS	AB=0.915;AC=26;AF=0.481;AN=54;BaseQRankSum=-5.723;DP=784;FS=4.228;HRun=0;HaplotypeScore=158.0889;InbreedingCoeff=0.1164;MQ=52.01;MQ0=32;MQRankSum=1.633;QD=5.75;ReadPosRankSum=-1.013;VQSLOD=3.0367;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:44,0:45:19.42:90,0,19	0/1:10,0:10:3.72:134,0,4	./.	0/0:49,0:6:2.90:0,3,16	1/1:22,0:24:2.47:36,2,0	1/1:16,0:15:9.03:125,9,0	1/1:40,0:39:21.48:574,21,0	0/0:23,0:21:16.63:0,17,221	1/1:14,16:32:2.99:47,3,0	1/1:25,0:25:0.22:8,0,0	0/1:17,0:15:0.87:3,0,1	0/1:13,18:34:6.68:7,0,43	0/1:32,0:31:28.15:447,0,28	0/1:27,0:27:84.75:405,0,85	0/1:29,1:30:20.22:384,0,20	0/1:23,14:41:36.07:36,0,158	1/1:24,1:25:9.06:503,9,0	1/1:15,0:14:0.10:1,0,0	0/0:19,0:20:21.82:0,22,207	0/0:22,0:21:20.38:0,20,177	0/0:58,0:55:51.58:0,52,551	0/1:12,6:19:28.05:40,0,28	0/1:14,0:14:0.06:0,0,0	0/1:33,0:31:0.01:0,0,0	0/1:24,0:24:99:249,0,103	0/0:28,0:29:26.03:0,26,248	0/0:16,0:16:24.52:0,25,245	0/0:8,0:8:9.02:0,9,95
chr10	69324549	.	C	CAG	804.87	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=3.855;DP=743;FS=5.760;HRun=0;HaplotypeScore=162.7263;InbreedingCoeff=-0.0892;MQ=49.25;MQ0=39;MQRankSum=0.076;QD=2.10;ReadPosRankSum=6.676;VQSLOD=1.3266;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:15,30:41:8.53:190,9,0	0/1:12,0:12:6.94:7,0,188	0/0:27,0:2:2.98:0,3,21	0/0:37,0:2:5.99:0,6,60	1/1:3,16:19:2.47:49,2,0	0/1:18,0:17:22.59:23,0,141	0/1:41,0:39:99:174,0,195	0/0:21,0:18:16.28:0,16,99	0/1:25,0:25:10.60:11,0,61	0/0:17,0:17:47.55:0,48,386	0/0:13,0:11:20.92:0,21,168	0/0:39,0:38:34.51:0,35,295	0/1:36,0:35:79.53:80,0,390	0/1:38,0:37:98.64:99,0,380	0/1:28,0:26:92.06:92,0,197	0/0:41,0:40:39.39:0,39,541	0/1:34,0:34:99:130,0,231	0/0:11,0:9:20.81:0,21,148	0/1:28,0:26:44.51:45,0,94	0/0:26,0:22:19.75:0,20,105	0/0:47,0:43:63.06:0,63,316	0/0:21,0:18:1.72:0,2,166	0/0:12,0:12:17.96:0,18,144	0/0:28,0:26:34.86:0,35,278	0/1:26,0:26:58.32:58,0,304	0/1:33,0:31:2.91:3,0,101	0/0:13,0:13:30.46:0,30,158	0/0:7,0:7:11.28:0,11,57
chr10	69324559	.	GACACACACACACACACACACACAC	G	2934.89	PASS	AB=0.815;AC=16;AF=0.308;AN=52;BaseQRankSum=9.886;DP=738;FS=2.291;HRun=0;HaplotypeScore=364.1068;InbreedingCoeff=0.6101;MQ=49.01;MQ0=37;MQRankSum=0.930;QD=10.44;ReadPosRankSum=-5.458;VQSLOD=0.4693;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:52,1:53:9.44:618,9,0	0/0:12,0:12:24.08:0,24,1919	./.	./.	1/1:19,0:21:17.57:224,18,0	0/0:20,0:19:30.07:0,30,2071	0/0:41,0:39:45.38:0,45,1084	1/1:9,0:20:37.02:327,37,0	0/0:28,0:28:17.77:0,18,1074	0/0:18,0:18:17.81:0,18,134	0/1:12,0:10:2.35:2,0,13	0/0:36,0:35:29.19:0,29,2310	0/0:34,0:33:59.86:0,60,3639	0/0:38,0:37:60.18:0,60,3833	0/0:25,0:23:28.13:0,28,2375	0/0:32,0:31:21.07:0,21,1709	0/0:36,0:36:75.21:0,75,4769	0/0:13,0:11:13.86:0,14,62	1/1:10,22:31:45.76:573,46,0	0/1:12,16:23:99:198,0,218	0/1:47,0:43:99:266,0,244	0/0:21,0:18:24.08:0,24,1889	0/0:16,0:16:6.31:0,6,39	0/0:31,0:29:2.03:0,2,20	0/0:23,0:23:39.58:0,40,2845	1/1:13,21:32:15.15:541,15,0	1/1:21,0:21:15.73:182,16,0	0/1:2,3:5:9.87:184,0,10
chr10	69324603	.	T	TAC	1506.36	PASS	AB=0.518;AC=8;AF=0.143;AN=56;BaseQRankSum=-3.260;DP=668;FS=5.405;HRun=0;HaplotypeScore=146.8077;InbreedingCoeff=0.8443;MQ=68.10;MQ0=8;MQRankSum=-3.238;QD=17.31;ReadPosRankSum=0.053;VQSLOD=3.6807;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:42:48.13:0,48,638	0/0:10,0:10:24.07:0,24,321	0/0:33,0:26:78.10:0,78,972	0/0:26,0:19:55.85:0,56,661	0/0:21,0:21:42.13:0,42,569	0/0:21,0:21:45.62:0,46,631	0/0:31,0:30:69.18:0,69,965	0/0:36,0:36:99:0,99,1342	0/0:16,0:16:36:0,36,468	1/1:24,0:24:69.23:1107,69,0	1/1:9,0:8:21.07:323,21,0	0/0:22,0:21:51.16:0,51,713	0/0:24,0:24:59.24:0,59,759	0/0:24,0:23:57.17:0,57,769	0/0:22,0:22:56.94:0,57,737	0/0:19,0:18:48.14:0,48,659	0/0:31,0:31:82.56:0,83,1021	1/1:0,15:15:12.04:213,12,0	0/0:34,0:32:83.98:0,84,1077	0/0:24,0:22:24.06:0,24,306	0/0:38,0:36:51.40:0,51,628	0/0:13,0:13:32.68:0,33,437	0/1:1,8:10:0.02:0,0,0	0/1:1,28:29:0.11:0,0,0	0/0:22,0:22:48.16:0,48,674	0/0:36,0:36:96.31:0,96,1295	0/0:32,0:32:77.97:0,78,962	0/0:3,0:3:3.01:0,3,37
chr10	69325378	.	GTA	G	4478.25	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=16.157;DP=755;FS=0.815;HRun=0;HaplotypeScore=120.3123;InbreedingCoeff=0.9999;MQ=58.60;MQ0=4;MQRankSum=-2.236;QD=35.83;ReadPosRankSum=1.851;VQSLOD=7.0044;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:64.23:0,64,1400	0/0:14,0:14:42.11:0,42,742	0/0:40,0:31:68.35:0,68,1380	0/0:34,0:28:43.41:0,43,1125	0/0:31,0:31:87.28:0,87,1634	0/0:16,0:16:36.55:0,37,740	0/0:20,1:21:57.15:0,57,995	0/0:33,0:33:93.23:0,93,1474	0/0:27,0:27:77.53:0,78,1344	1/1:7,21:28:84.02:1198,84,0	1/1:2,25:27:69.22:1028,69,0	0/0:21,0:21:60.16:0,60,1087	0/0:27,0:27:81.23:0,81,1450	0/0:22,0:22:66.19:0,66,1140	0/0:36,0:36:99:0,105,1896	0/0:38,0:38:99:0,114,2043	0/0:30,0:30:81.15:0,81,1362	1/1:3,12:15:38.94:513,39,0	0/0:16,0:16:48.12:0,48,795	0/0:29,0:29:81.28:0,81,1533	0/0:30,0:30:84.23:0,84,1453	0/0:37,0:37:99:0,111,1954	1/1:7,23:30:77.47:1018,77,0	1/1:8,17:25:51.07:720,51,0	0/0:32,0:32:93.25:0,93,1631	0/0:26,1:27:35.43:0,35,1342	0/0:19,0:18:57.18:0,57,1064	0/0:20,0:20:57.09:0,57,934
chr10	69325448	.	A	ATG	5067.45	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=16.046;DP=934;FS=0.000;HRun=0;HaplotypeScore=166.2542;InbreedingCoeff=0.9991;MQ=58.60;MQ0=2;MQRankSum=-6.500;QD=38.39;ReadPosRankSum=-2.924;VQSLOD=4.5835;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:37.52:0,38,602	0/0:13,0:13:39.13:0,39,536	0/0:49,0:34:90.16:0,90,1150	0/0:39,0:30:70.39:0,70,902	0/0:32,0:32:84.28:0,84,1153	0/0:20,0:20:57.19:0,57,783	0/0:26,0:26:71.33:0,71,945	0/0:54,0:53:99:0,144,1944	0/0:33,0:33:90.30:0,90,1236	1/1:7,30:37:96.33:1671,96,0	1/1:7,17:24:60.16:858,60,0	0/0:36,0:36:99:0,105,1422	0/0:32,0:32:96.25:0,96,1263	0/0:39,0:39:99:0,105,1407	0/0:50,0:50:99:0,138,1845	0/0:45,0:45:99:0,123,1670	0/0:35,0:36:79.69:0,80,1059	1/1:11,6:17:21.78:502,22,0	0/0:13,0:13:39.11:0,39,506	0/0:36,0:36:99:0,99,1327	0/0:61,0:61:99:0,171,2287	0/0:43,0:43:99:0,117,1528	1/1:3,28:31:84.28:1386,84,0	1/1:8,15:23:42.12:651,42,0	0/0:37,0:37:92.22:0,92,1260	0/0:31,1:32:37.18:0,37,1098	0/0:25,0:25:66.20:0,66,889	0/0:23,0:23:63.21:0,63,865
chr10	69325664	.	ATG	A	5400.03	PASS	AB=0.593;AC=9;AF=0.161;AN=56;BaseQRankSum=18.010;DP=1145;FS=1.032;HRun=0;HaplotypeScore=184.5835;InbreedingCoeff=0.8665;MQ=58.23;MQ0=2;MQRankSum=1.245;QD=29.51;ReadPosRankSum=1.497;VQSLOD=6.0652;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,105,1695	0/0:20,0:20:54.18:0,54,906	0/0:33,0:24:53.31:0,53,789	0/0:42,2:34:81.24:0,81,1254	0/0:41,0:41:99:0,108,1803	0/0:37,0:37:99:0,102,1675	0/0:22,0:22:48.06:0,48,748	0/0:42,0:42:93.23:0,93,1432	0/0:53,0:53:99:0,147,2444	1/1:6,59:65:99:2226,175,0	1/1:4,23:27:57.10:703,57,0	0/0:45,0:45:99:0,126,2062	0/0:61,0:61:99:0,163,2745	0/0:45,0:45:99:0,111,1885	0/0:90,0:90:99:0,253,4220	0/0:62,1:63:99:0,133,2697	0/0:22,0:22:54.08:0,54,845	0/1:10,22:32:28.70:816,0,29	0/0:22,0:22:57.17:0,57,926	0/0:39,0:39:99:0,99,1645	0/0:55,0:55:99:0,147,2435	0/0:47,0:47:99:0,138,2334	1/1:2,29:31:75.20:955,75,0	1/1:9,19:28:20.29:700,20,0	0/0:29,0:29:69.22:0,69,1133	0/0:47,0:47:99:0,126,2046	0/0:36,1:37:66.30:0,66,1595	0/0:24,0:24:69.24:0,69,1170
chr10	69325968	.	CGTAT	C	3648.49	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=14.045;DP=1010;FS=10.196;HRun=0;HaplotypeScore=210.9526;InbreedingCoeff=0.9694;MQ=57.87;MQ0=5;MQRankSum=-10.829;QD=24.99;ReadPosRankSum=-1.593;VQSLOD=2.1941;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:76.14:0,76,1814	0/0:12,0:12:27.09:0,27,672	0/0:46,0:29:58.98:0,59,1216	0/0:42,0:29:37.25:0,37,906	0/0:30,0:30:69.24:0,69,1653	0/0:23,0:23:51.18:0,51,1269	0/0:29,0:29:60.21:0,60,1434	0/0:61,1:62:30.26:0,30,2475	0/0:41,0:41:96.33:0,96,2327	1/1:20,24:44:93.28:1514,93,0	1/1:10,19:30:41.65:704,42,0	0/0:54,0:54:99:0,123,3024	0/0:34,0:34:78.25:0,78,1809	0/0:37,1:38:87.30:0,87,2108	0/0:63,0:63:99:0,154,3664	0/0:44,0:44:99:0,102,2503	0/0:24,0:24:54.98:0,55,1473	1/1:7,5:12:15.05:253,15,0	0/0:23,0:24:48.16:0,48,1095	0/0:38,1:39:99:0,99,2436	0/0:54,0:54:99:0,129,3121	0/0:35,0:35:96.33:0,96,2291	1/1:8,23:31:60.19:986,60,0	1/1:16,13:29:8.22:191,8,0	0/0:36,0:36:71.78:0,72,2027	0/0:41,2:43:10.31:0,10,2485	0/0:35,0:35:93.32:0,93,2248	0/0:25,0:25:49.32:0,49,1238
chr10	69325991	.	ATG	A	1557.70	PASS	AB=0.565;AC=9;AF=0.161;AN=56;BaseQRankSum=12.650;DP=980;FS=5.222;HRun=0;HaplotypeScore=170.5170;InbreedingCoeff=0.8933;MQ=56.93;MQ0=4;MQRankSum=-8.708;QD=12.46;ReadPosRankSum=-0.941;VQSLOD=3.2244;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:75.83:0,76,1163	0/0:14,0:14:36.11:0,36,563	0/0:45,0:26:37.73:0,38,608	0/0:39,0:24:31.55:0,32,656	0/0:30,0:30:87.28:0,87,1408	0/0:19,0:19:45.15:0,45,738	0/0:34,0:34:87.30:0,87,1397	0/0:51,0:51:99:0,105,1698	0/0:46,0:46:99:0,129,2095	1/1:7,25:33:75.07:907,75,0	1/1:8,20:28:34.21:323,34,0	0/0:55,0:55:99:0,141,2253	0/0:35,0:35:99:0,105,1724	0/0:40,0:40:87.30:0,87,1429	0/0:54,0:54:99:0,135,2197	0/0:42,0:42:99:0,114,1850	0/0:27,0:27:69.24:0,69,1132	0/1:3,10:13:3.39:291,0,3	0/0:22,0:22:48.16:0,48,785	0/0:37,2:39:27.26:0,27,1465	0/0:56,0:56:99:0,138,2200	0/0:40,0:40:99:0,105,1720	1/1:6,0:28:31.25:155,31,0	1/1:4,0:23:8.28:42,8,0	0/0:35,0:35:74.79:0,75,1201	0/0:40,1:42:56.81:0,57,1603	0/0:35,0:35:90.31:0,90,1475	0/0:20,0:20:54.10:0,54,858
chr10	69326383	.	GCAGTAACCTC	G	4483.27	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=11.533;DP=631;FS=2.574;HRun=0;HaplotypeScore=187.4019;InbreedingCoeff=0.9910;MQ=77.26;MQ0=0;MQRankSum=-8.040;QD=54.02;ReadPosRankSum=1.084;VQSLOD=4.8923;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:72.25:0,72,3582	0/0:18,0:18:45.14:0,45,1989	0/0:30,0:30:75.16:0,75,2675	0/0:27,0:27:60.21:0,60,2482	0/0:35,0:35:96.33:0,96,4400	0/0:22,0:22:57.18:0,57,2702	0/0:21,0:21:54.19:0,54,2243	0/0:30,0:30:69.23:0,69,3101	0/0:14,0:14:42.14:0,42,1907	1/1:3,24:27:69.23:1879,69,0	1/1:2,14:16:33.07:957,33,0	0/0:31,0:31:81.28:0,81,3991	0/0:19,0:19:54.19:0,54,2524	0/0:28,0:28:78.27:0,78,3688	0/0:33,0:33:96.33:0,96,4619	0/0:28,0:28:78.27:0,78,3778	0/0:21,0:21:57.18:0,57,2721	1/1:3,9:12:15.05:469,15,0	0/0:14,0:14:36.12:0,36,1271	0/0:33,0:33:84.29:0,84,3962	0/0:13,0:13:36.11:0,36,1650	0/0:18,0:18:48.15:0,48,2277	1/1:0,16:16:24.08:750,24,0	1/1:4,8:12:15.05:429,15,0	0/0:19,0:19:48.15:0,48,2177	0/0:30,0:30:72.25:0,72,3475	0/0:31,0:30:87.30:0,87,4131	0/0:7,0:7:21.07:0,21,996
chr10	69327167	.	A	AT	5060.05	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=12.089;DP=635;FS=5.476;HRun=7;HaplotypeScore=72.4181;InbreedingCoeff=0.9968;MQ=78.40;MQ0=0;MQRankSum=-2.798;QD=32.03;ReadPosRankSum=-0.629;VQSLOD=4.3058;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,102,978	0/0:12,0:12:33.05:0,33,319	0/0:22,0:23:44.71:0,45,409	0/0:18,0:18:41.25:0,41,375	0/0:32,0:32:81.10:0,81,775	0/0:33,0:33:87.13:0,87,840	0/0:20,0:20:57.09:0,57,550	1/1:5,28:33:84.26:1014,84,0	0/0:14,0:14:42.07:0,42,406	0/0:23,0:23:60.09:0,60,579	0/0:16,0:16:36.05:0,36,347	0/0:21,0:21:57.09:0,57,550	0/0:12,0:12:33.05:0,33,319	0/0:27,0:27:73.10:0,73,721	0/0:21,0:21:54.08:0,54,521	0/0:24,0:24:69.09:0,69,660	0/0:28,0:28:81.13:0,81,782	0/0:16,0:16:42.07:0,42,406	1/1:3,19:22:57.17:689,57,0	1/1:1,25:26:72.22:870,72,0	1/1:0,10:10:27.08:326,27,0	0/0:28,0:28:78.12:0,78,753	0/0:30,0:30:78.10:0,78,741	0/0:18,0:18:45.06:0,45,433	0/0:25,0:25:60.07:0,60,574	1/1:2,25:27:49.26:861,49,0	1/1:3,32:35:93.28:1119,93,0	1/1:0,5:5:15.05:181,15,0
chr10	69328162	.	C	CAACTA	25898.62	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-4.750;DP=818;FS=4.386;HRun=0;HaplotypeScore=155.9756;InbreedingCoeff=0.9954;MQ=77.93;MQ0=0;MQRankSum=-16.851;QD=76.17;ReadPosRankSum=-3.677;VQSLOD=5.2463;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,154,3144	0/0:9,0:9:24.08:0,24,503	0/0:19,0:19:54.19:0,54,1123	0/0:31,0:31:81.28:0,81,1640	0/0:36,0:36:99:0,103,2173	0/0:23,0:23:63.22:0,63,1341	0/0:39,0:39:99:0,117,2492	1/1:12,17:30:87.30:2617,87,0	0/0:26,0:26:75.26:0,75,1583	1/1:7,24:32:84.29:2556,84,0	1/1:4,15:20:54.18:1477,54,0	0/0:36,0:36:99:0,99,2096	0/0:25,0:25:75.26:0,75,1595	0/0:27,0:27:81.28:0,81,1726	0/0:32,0:32:90.27:0,90,1874	0/0:38,0:37:99:0,108,2302	0/0:43,0:43:99:0,120,2474	1/1:5,21:27:66.23:1987,66,0	1/1:10,17:30:84.25:2455,84,0	1/1:6,20:27:66.19:1856,66,0	1/1:7,29:39:87.30:2383,87,0	0/0:26,0:26:62.82:0,63,1342	1/1:5,9:15:39.06:986,39,0	1/1:3,35:39:87.77:2667,88,0	0/0:17,0:17:51.15:0,51,1046	1/1:12,36:50:99:4227,144,0	1/1:4,22:27:75.26:2312,75,0	1/1:0,4:4:12.04:375,12,0
chr10	69329938	.	G	GGTGTGTGTGTGTGT	9154.69	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=2.279;DP=604;FS=5.389;HRun=0;HaplotypeScore=230.3289;InbreedingCoeff=0.8469;MQ=62.04;MQ0=10;MQRankSum=-8.073;QD=27.17;ReadPosRankSum=-5.341;VQSLOD=2.4120;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:24:5.97:145,6,0	0/0:7,0:9:14.99:0,15,287	0/1:27,0:18:3.83:4,0,88	0/0:19,0:15:12.60:0,13,167	1/1:22,0:21:11.99:210,12,0	0/0:25,0:26:54.10:0,54,1668	0/0:15,0:19:39.09:0,39,1019	1/1:37,0:37:46.93:1211,47,0	0/0:20,0:21:36.10:0,36,1125	1/1:22,0:20:40.94:1268,41,0	1/1:16,7:26:12.02:651,12,0	0/0:20,0:21:36.08:0,36,973	0/0:22,0:22:42.11:0,42,1408	0/0:22,0:23:54.16:0,54,1670	0/0:15,0:15:27.09:0,27,1033	0/0:16,0:17:42.13:0,42,1518	0/0:28,0:29:31:0,31,1899	1/1:7,0:17:15.05:716,15,0	1/1:9,2:10:9.03:486,9,0	1/1:17,9:27:12.02:665,12,0	1/1:20,0:20:5.94:75,6,0	0/0:24,0:25:51.15:0,51,1610	1/1:10,0:16:6.02:229,6,0	1/1:15,0:26:3.01:156,3,0	0/0:18,0:20:51.14:0,51,1479	1/1:20,2:22:45.14:1835,45,0	1/1:8,14:22:14.58:914,15,0	1/1:6,6:16:12.04:591,12,0
chr10	69330436	.	G	GTCCA	3101.93	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-1.024;DP=876;FS=1.036;HRun=0;HaplotypeScore=143.5906;InbreedingCoeff=0.9595;MQ=56.73;MQ0=12;MQRankSum=-1.602;QD=21.69;ReadPosRankSum=0.176;VQSLOD=3.4127;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,104,1601	0/0:11,0:11:18.06:0,18,289	0/0:58,0:28:24.65:0,25,331	0/0:56,0:37:54.09:0,54,777	0/0:35,0:35:69.02:0,69,1070	0/0:17,0:17:39.13:0,39,616	0/0:33,0:33:53.35:0,53,763	0/0:46,0:45:69.17:0,69,1016	0/0:33,0:33:78.19:0,78,1158	1/1:10,3:32:22.38:609,22,0	1/1:9,0:20:7.79:61,8,0	0/0:31,0:31:54.18:0,54,882	0/0:27,0:28:72.22:0,72,1123	0/0:32,0:32:81.28:0,81,1319	0/0:34,0:34:72.18:0,72,1072	0/0:24,0:24:60.20:0,60,980	0/0:23,0:23:51.15:0,51,801	1/1:26,1:28:19.51:193,20,0	0/0:24,0:24:48.16:0,48,759	0/0:31,0:31:66.20:0,66,1021	0/0:50,0:53:90.22:0,90,1334	0/0:24,0:24:66.20:0,66,1030	1/1:10,19:29:33.11:803,33,0	1/1:4,28:33:66.23:1606,66,0	0/0:28,0:29:13.53:0,14,928	0/0:33,0:33:34.99:0,35,1025	0/0:20,0:20:42.14:0,42,677	0/0:3,0:3:9.02:0,9,123
chr10	69330896	.	TA	T	1782.18	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=8.746;DP=684;FS=3.890;HRun=10;HaplotypeScore=71.7202;InbreedingCoeff=0.8794;MQ=77.46;MQ0=0;MQRankSum=-1.701;QD=16.97;ReadPosRankSum=1.276;VQSLOD=4.2664;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,102,1092	0/0:11,0:11:30.07:0,30,324	0/0:28,0:25:25.52:0,26,421	0/1:17,0:16:1.31:1,0,203	0/0:21,1:22:34.11:0,34,604	0/0:22,0:22:63.16:0,63,688	0/0:17,0:17:39.06:0,39,418	0/0:26,0:26:60.13:0,60,635	0/0:15,0:15:30.07:0,30,323	1/1:5,31:36:89.97:779,90,0	1/1:0,25:25:68.98:599,69,0	0/0:24,1:25:42.91:0,43,675	0/0:32,0:33:87.03:0,87,917	0/0:25,0:25:69.19:0,69,763	0/0:29,1:30:49.68:0,50,827	0/0:27,0:27:70.03:0,70,739	0/0:23,2:25:11.06:0,11,567	1/1:6,21:27:62.98:546,63,0	0/0:23,0:23:63.10:0,63,664	0/0:32,0:32:74.77:0,75,792	0/0:14,0:14:36.08:0,36,389	0/0:26,0:26:69.16:0,69,751	0/0:2,0:20:45.55:0,46,231	0/0:4,0:20:40.26:0,40,248	0/0:29,0:29:69.18:0,69,756	0/0:36,1:37:79.24:0,79,1060	0/0:28,1:28:46.07:0,46,712	0/0:4,0:4:12.03:0,12,133
chr10	69331542	.	TAC	T	392.41	PASS	AB=0.848;AC=26;AF=0.520;AN=50;BaseQRankSum=1.135;DP=533;FS=2.449;HRun=0;HaplotypeScore=70.7765;InbreedingCoeff=0.2958;MQ=58.25;MQ0=11;MQRankSum=1.206;QD=1.35;ReadPosRankSum=0.402;VQSLOD=1.6430;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:40:0.47:0,0,1	0/0:5,0:5:3.01:0,3,44	./.	./.	0/1:8,0:15:0:0,0,0	0/1:13,4:17:15.92:55,0,16	1/1:24,1:24:6.02:64,6,0	0/0:20,0:19:0:0,0,0	1/1:7,3:10:3:32,3,0	0/0:12,0:11:3:0,3,26	0/0:16,0:16:3:0,3,26	1/1:11,2:13:3.01:32,3,0	0/0:7,0:6:0:0,0,0	1/1:9,2:11:3.01:32,3,0	0/0:26,0:26:13.66:0,14,337	1/1:19,7:26:11.71:128,12,0	1/1:23,3:26:2.28:31,2,0	0/0:11,0:10:3.47:0,3,27	1/1:11,0:12:5.06:21,5,0	./.	1/1:52,0:52:2.82:14,3,0	1/1:17,0:17:3:32,3,0	0/0:15,0:15:9.02:0,9,105	0/0:27,0:26:18.02:0,18,195	0/1:17,0:17:16.30:16,0,119	0/1:16,0:18:16.45:19,0,16	1/1:14,0:18:8.52:42,9,0	1/1:8,0:9:2.84:14,3,0
chr10	69331592	.	C	CACAG	1225.07	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=1.901;DP=623;FS=0.000;HRun=0;HaplotypeScore=102.6612;InbreedingCoeff=0.9533;MQ=69.92;MQ0=7;MQRankSum=1.346;QD=13.76;ReadPosRankSum=-0.091;VQSLOD=2.5844;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:42:77.85:0,78,632	0/0:8,0:8:23.86:0,24,215	0/0:27,0:21:56.87:0,57,542	0/0:37,0:26:68.78:0,69,701	0/0:16,0:16:23.95:0,24,195	0/0:18,0:18:22.01:0,22,353	0/0:27,0:28:74.88:0,75,645	0/0:28,0:28:83.94:0,84,729	0/0:19,0:19:42.69:0,43,345	1/1:0,0:12:29.92:252,30,0	1/1:15,0:15:17.94:266,18,0	0/0:20,0:20:51.25:0,51,419	0/0:19,0:19:47.17:0,47,365	0/0:27,0:27:66.32:0,66,548	0/0:25,0:25:71.99:0,72,832	0/0:21,0:21:48:0,48,465	0/0:28,0:28:56.42:0,56,518	1/1:0,16:19:3.01:84,3,0	0/0:15,0:15:38.37:0,38,334	0/0:16,0:16:44.30:0,44,351	0/0:53,0:47:99:0,108,911	0/0:20,0:20:53.80:0,54,435	1/1:19,0:19:28.16:349,28,0	1/1:23,0:23:53.19:442,53,0	0/0:20,0:20:44.95:0,45,423	0/0:23,0:23:37.12:0,37,538	0/0:11,0:11:25.49:0,25,228	0/0:10,0:10:23.84:0,24,192
chr10	69334341	.	AACACACACACATACACAC	A	980.60	PASS	AB=1.000;AC=8;AF=0.143;AN=56;BaseQRankSum=5.063;DP=656;FS=25.991;HRun=0;HaplotypeScore=277.9483;InbreedingCoeff=0.7128;MQ=63.46;MQ0=9;MQRankSum=0.675;QD=8.17;ReadPosRankSum=3.052;VQSLOD=1.0658;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:40:76.85:0,77,2624	0/0:7,0:7:15.02:0,15,764	0/0:33,0:18:15.48:0,15,230	0/1:44,0:24:0.80:1,0,172	0/0:18,0:18:38.99:0,39,1322	0/0:22,0:21:40.45:0,40,1440	0/0:38,0:38:66.15:0,66,2837	0/0:35,0:33:65.05:0,65,799	0/0:23,0:23:47.98:0,48,1222	1/1:6,16:22:41.96:515,42,0	1/1:15,0:15:26.95:268,27,0	0/0:19,0:19:42.07:0,42,1950	0/0:17,0:17:32.49:0,32,756	0/0:26,0:26:57.06:0,57,2386	0/0:30,0:30:65.87:0,66,2005	0/0:24,0:24:57.04:0,57,2129	0/0:25,0:25:53.23:0,53,1772	1/1:14,0:14:26.71:187,27,0	0/0:21,0:21:35.77:0,36,808	0/0:9,0:9:21.01:0,21,453	0/0:48,0:48:97.90:0,98,2927	0/0:19,0:19:38.95:0,39,1397	0/0:13,0:13:3.01:0,3,85	0/1:25,0:25:99:158,0,381	0/0:18,0:18:39.07:0,39,1789	0/0:22,0:22:42.97:0,43,1220	0/0:18,0:18:32.95:0,33,665	0/0:10,0:10:21:0,21,673
chr10	69334347	.	CACACAT	C	914.92	PASS	AB=0.975;AC=11;AF=0.196;AN=56;BaseQRankSum=4.959;DP=694;FS=14.690;HRun=0;HaplotypeScore=149.1540;InbreedingCoeff=0.8538;MQ=56.77;MQ0=11;MQRankSum=-0.472;QD=7.09;ReadPosRankSum=1.626;VQSLOD=1.8456;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:42:74.86:0,75,820	0/0:8,0:8:18.03:0,18,431	0/0:30,0:15:15.48:0,15,230	0/1:38,0:19:1.06:1,0,172	0/0:19,0:19:38.94:0,39,435	0/0:26,0:25:45.28:0,45,739	0/0:35,0:35:55.95:0,56,919	0/0:37,0:36:74.99:0,75,705	0/0:26,0:26:50.89:0,51,585	1/1:20,0:20:41.93:362,42,0	1/1:14,0:14:26.94:217,27,0	0/0:27,0:27:9.03:0,9,739	0/0:21,0:21:19.45:0,19,336	0/0:28,0:28:57.57:0,58,912	0/0:32,0:32:68.84:0,69,943	0/0:28,0:28:71.50:0,71,1211	0/0:29,0:29:8.85:0,9,718	1/1:15,0:15:17.30:175,17,0	0/0:20,0:20:41.57:0,42,537	0/0:9,0:9:23.02:0,23,222	0/0:46,0:45:97.83:0,98,1153	0/0:24,0:24:44.95:0,45,766	1/1:1,12:13:3.01:36,3,0	1/1:26,2:28:35.92:290,36,0	0/0:22,0:22:45.04:0,45,759	0/0:21,0:21:13.57:0,14,492	0/0:20,0:20:38:0,38,417	0/0:13,0:12:20.91:0,21,275
chr10	69334351	.	CAT	C	1121.36	PASS	AB=1.000;AC=18;AF=0.321;AN=56;BaseQRankSum=5.627;DP=680;FS=5.629;HRun=0;HaplotypeScore=101.8142;InbreedingCoeff=0.2396;MQ=55.44;MQ0=13;MQRankSum=-0.667;QD=3.54;ReadPosRankSum=-1.987;VQSLOD=1.5605;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:43:11.36:0,11,479	0/0:8,0:8:18.03:0,18,239	0/0:28,0:14:15.48:0,15,230	0/1:37,0:17:0.80:1,0,172	0/0:20,0:20:16.40:0,16,297	0/1:27,0:26:18.29:18,0,373	0/0:34,0:33:44.08:0,44,529	0/0:34,0:32:73.39:0,73,698	0/1:24,0:24:1.04:1,0,321	1/1:17,0:17:41.87:334,42,0	0/1:14,0:14:8.95:183,0,9	0/1:28,0:28:99:126,0,273	0/1:20,0:20:0:0,0,214	0/0:28,0:28:13.88:0,14,401	0/0:23,9:32:27.07:0,27,568	0/0:29,0:29:8.44:0,8,601	0/1:31,0:31:52.74:53,0,326	1/1:12,0:12:15.07:173,15,0	0/0:18,0:18:46.84:0,47,375	0/0:9,0:9:25.05:0,25,194	0/0:46,0:44:75.46:0,75,785	0/1:24,0:24:15.34:15,0,370	1/1:12,0:12:2.90:16,3,0	1/1:30,0:30:41.91:338,42,0	0/1:22,0:22:1.89:2,0,369	0/1:19,0:19:27.26:27,0,286	0/0:20,0:20:14.58:0,15,238	0/0:13,0:12:20.76:0,21,174
chr10	69334353	.	TAC	T	201.14	PASS	AB=0.959;AC=14;AF=0.280;AN=50;BaseQRankSum=1.920;DP=685;FS=4.292;HRun=0;HaplotypeScore=106.5503;InbreedingCoeff=0.0082;MQ=53.89;MQ0=14;MQRankSum=-1.122;QD=0.68;ReadPosRankSum=-1.178;VQSLOD=1.3923;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:41,2:44:11.19:84,11,0	0/0:7,0:10:12.03:0,12,154	./.	./.	0/1:17,6:23:26.03:26,0,38	0/1:26,0:25:16.02:16,0,138	0/1:32,2:33:21.04:21,0,115	0/0:37,0:35:5.74:0,6,29	0/1:24,0:24:15.36:15,0,55	1/1:16,0:16:2.84:14,3,0	1/1:14,0:14:1.70:6,2,0	0/1:28,1:29:48.35:48,0,148	0/0:14,0:20:7.83:0,8,56	0/0:27,0:27:11.10:0,11,194	0/1:32,0:33:30.47:30,0,201	0/0:29,0:30:21.63:0,22,379	0/1:27,1:28:78.51:79,0,172	./.	0/0:23,0:23:17.58:0,18,121	0/0:7,0:9:7.07:0,7,38	0/0:43,0:41:17.52:0,18,231	0/1:22,0:22:1.46:1,0,151	0/0:13,0:13:2.95:0,3,24	0/0:30,1:31:2.80:0,3,24	0/0:21,0:21:13.46:0,13,197	0/0:19,0:19:11.93:0,12,91	0/0:14,0:20:6.17:0,6,76	0/0:8,0:12:5.97:0,6,46
chr10	69334960	.	A	AT	807.38	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-7.465;DP=626;FS=3.409;HRun=9;HaplotypeScore=64.7769;InbreedingCoeff=0.9980;MQ=84.14;MQ0=0;MQRankSum=-2.944;QD=23.07;ReadPosRankSum=-0.448;VQSLOD=4.4036;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,1:39:71.71:0,72,832	0/0:10,0:10:23.97:0,24,208	0/0:28,0:27:62.96:0,63,539	0/0:20,0:19:30.51:0,31,232	0/0:36,0:36:95.97:0,96,833	0/0:18,0:17:53.99:0,54,469	0/0:21,0:21:50.98:0,51,443	0/0:32,0:33:52.72:0,53,602	0/0:22,0:22:59.99:0,60,521	0/0:29,0:30:74:0,74,631	0/0:25,0:25:71.98:0,72,625	0/0:24,0:24:62.99:0,63,546	0/0:17,0:17:44.99:0,45,391	0/0:18,0:18:50.99:0,51,443	0/0:24,1:25:38.80:0,39,566	0/0:23,0:23:65.97:0,66,569	0/0:26,0:26:65.97:0,66,573	0/0:21,0:21:53.98:0,54,469	0/0:16,0:16:29.99:0,30,260	0/0:18,0:18:44.98:0,45,391	0/0:14,0:14:35.98:0,36,312	0/0:26,0:26:62.97:0,63,547	1/1:2,21:23:54.15:597,54,0	1/1:1,11:12:30.08:332,30,0	0/0:22,0:22:59.97:0,60,521	0/0:26,0:26:74.98:0,75,651	0/0:18,0:18:47.97:0,48,417	0/0:15,0:15:44.99:0,45,391
chr10	69339520	.	AGT	A	961.22	PASS	AB=0.914;AC=20;AF=0.370;AN=54;BaseQRankSum=7.418;DP=789;FS=14.595;HRun=0;HaplotypeScore=107.0613;InbreedingCoeff=-0.3254;MQ=63.77;MQ0=15;MQRankSum=-0.215;QD=1.77;ReadPosRankSum=1.565;VQSLOD=1.3643;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:35,2:36:27.22:27,0,416	0/1:11,4:15:18.13:18,0,139	0/0:29,0:18:0:0,0,0	0/0:42,0:19:0:0,0,0	0/1:19,0:20:8.13:8,0,39	0/1:17,0:18:10.28:10,0,303	0/1:32,5:37:57.50:57,0,418	0/0:35,0:34:17.29:0,17,228	0/1:25,2:27:45.31:45,0,584	1/1:23,4:28:25.03:232,25,0	./.	0/1:31,1:34:49.21:49,0,431	0/1:30,2:32:12.23:12,0,618	0/1:27,3:30:39.22:39,0,261	0/1:40,1:41:54.46:54,0,624	1/1:22,10:34:35.76:360,36,0	0/0:20,0:20:26.57:0,27,504	0/0:11,0:11:2.97:0,3,20	0/1:17,1:18:24.14:24,0,76	0/1:26,1:28:23.21:23,0,242	0/1:70,2:72:26.31:26,0,541	0/1:22,4:26:45.28:45,0,205	0/0:14,0:13:2.55:0,3,10	0/0:19,0:18:5.58:0,6,33	0/0:33,0:33:5.73:0,6,377	0/0:36,0:35:3.18:0,3,307	0/1:22,5:27:2.59:3,0,361	0/1:13,2:15:75.46:75,0,176
chr10	69339557	.	G	GTGTGTGTA	128.14	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=4.431;DP=734;FS=8.560;HRun=0;HaplotypeScore=219.9971;InbreedingCoeff=0.7219;MQ=58.61;MQ0=16;MQRankSum=-1.451;QD=3.46;ReadPosRankSum=-2.994;VQSLOD=0.7892;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:69.42:0,69,1143	0/0:11,0:11:20.78:0,21,333	0/0:36,0:17:19.32:0,19,338	0/0:39,0:21:37.04:0,37,372	0/0:14,0:14:23.02:0,23,277	0/0:23,0:23:53.71:0,54,720	0/0:32,0:32:75.70:0,76,1220	0/0:29,0:28:79.09:0,79,771	0/0:38,0:38:99:0,108,1590	0/0:29,0:29:72.23:0,72,703	0/0:12,0:11:0.44:0,0,1	0/0:31,0:31:87.03:0,87,1374	0/0:38,0:38:98.79:0,99,1690	0/0:19,0:19:47.97:0,48,681	0/0:36,0:36:91.24:0,91,1619	0/0:32,0:32:77.93:0,78,1106	0/0:24,0:24:62.45:0,62,1151	0/0:9,0:9:7.20:0,7,103	0/0:14,0:14:36:0,36,409	0/0:21,0:21:51.02:0,51,795	0/0:60,0:58:99:0,117,1571	0/0:22,0:22:51.01:0,51,770	1/1:12,1:12:5.28:109,5,0	1/1:20,3:23:4.15:117,4,0	0/0:28,0:28:60.04:0,60,972	0/0:28,0:28:61.49:0,61,619	0/0:24,0:24:56:0,56,825	0/0:11,0:10:6.65:0,7,557
chr10	69339577	.	AGTGTGTGCAT	A	1754.03	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=7.936;DP=733;FS=1.688;HRun=0;HaplotypeScore=228.9785;InbreedingCoeff=0.7825;MQ=61.34;MQ0=5;MQRankSum=-7.439;QD=22.20;ReadPosRankSum=1.314;VQSLOD=3.1059;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:93.32:0,93,4229	0/0:12,0:12:33.11:0,33,1638	0/0:44,0:29:58.26:0,58,2594	0/0:40,0:30:72.70:0,73,2306	0/0:16,0:16:45.15:0,45,2193	0/0:21,0:21:57.19:0,57,2649	0/0:31,0:31:72.25:0,72,3078	0/0:34,0:34:74.81:0,75,3954	0/0:35,0:35:90.31:0,90,4439	1/1:9,11:20:39.13:1172,39,0	1/1:1,12:13:5.89:192,6,0	0/0:29,0:29:72.25:0,72,3367	0/0:34,0:34:96.33:0,96,4572	0/0:22,0:22:66.23:0,66,3039	0/0:38,0:38:99:0,99,4937	0/0:40,0:39:99:0,99,4814	0/0:21,0:21:60.18:0,60,2772	1/1:2,4:6:14.98:340,15,0	0/0:21,0:21:63.22:0,63,2630	0/0:26,0:26:75.24:0,75,3499	0/0:51,0:51:99:0,128,5944	0/0:28,0:28:78.27:0,78,3950	1/1:1,11:12:3.13:96,3,0	1/1:8,8:16:3.90:98,4,0	0/0:27,0:27:72.23:0,72,2955	0/0:28,0:28:71.61:0,72,3339	0/0:22,0:22:60.21:0,60,3104	0/1:11,0:11:12.45:12,0,1262
chr10	69339587	.	T	TGA	373.56	PASS	AB=0.864;AC=5;AF=0.089;AN=56;BaseQRankSum=3.954;DP=778;FS=9.556;HRun=0;HaplotypeScore=134.6417;InbreedingCoeff=0.3556;MQ=59.87;MQ0=3;MQRankSum=-4.724;QD=6.23;ReadPosRankSum=-3.340;VQSLOD=1.7170;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:93.26:0,93,1352	0/0:14,0:14:39.10:0,39,573	0/0:44,0:32:85.40:0,85,1152	0/0:41,0:29:65.61:0,66,875	0/0:21,0:21:60.19:0,60,897	0/0:22,0:22:63.16:0,63,918	0/0:30,0:30:81.22:0,81,1154	0/0:41,0:41:99:0,114,1589	0/0:35,0:35:99:0,102,1515	0/1:15,7:21:22.52:370,0,23	0/1:13,1:14:0.80:5,0,1	0/0:28,0:28:78.24:0,78,1149	0/0:34,0:34:99:0,99,1449	0/0:26,0:26:75.20:0,75,1078	0/0:38,0:38:99:0,111,1691	0/0:44,0:43:99:0,120,1770	0/0:25,0:25:72.18:0,72,1060	0/1:8,1:8:25.04:47,0,25	0/0:25,0:25:75.18:0,75,1011	0/0:25,0:25:72.23:0,72,1081	0/0:54,0:54:99:0,153,2045	0/0:32,0:32:90.29:0,90,1356	1/1:14,1:15:1.42:56,1,0	0/0:13,0:13:1.57:0,2,4	0/0:30,0:30:87.20:0,87,1202	0/0:30,0:30:66.38:0,66,1207	0/0:22,0:22:63.20:0,63,943	0/0:12,0:11:32.82:0,33,448
chr10	69339729	.	GTC	G	4106.54	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=14.716;DP=821;FS=1.750;HRun=0;HaplotypeScore=110.1618;InbreedingCoeff=0.9987;MQ=62.73;MQ0=11;MQRankSum=-1.998;QD=29.97;ReadPosRankSum=3.123;VQSLOD=5.2152;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:75.05:0,75,1225	0/0:16,0:16:48.14:0,48,808	0/0:36,0:27:53.25:0,53,834	0/0:28,0:23:58.06:0,58,846	0/0:40,0:40:99:0,120,2017	0/0:18,0:18:42.14:0,42,788	0/0:30,0:29:69.18:0,69,1106	0/0:50,0:48:99:0,144,2233	0/0:32,0:32:96.31:0,96,1670	1/1:3,38:38:99:1400,102,0	1/1:1,24:23:19.71:767,20,0	0/0:26,0:26:75.24:0,75,1326	0/0:27,0:27:78.21:0,78,1306	0/0:22,0:22:66.21:0,66,1215	0/0:41,0:41:99:0,120,1981	0/0:31,0:31:90.29:0,90,1578	0/0:29,0:29:83.85:0,84,1399	1/1:2,18:19:47.71:640,48,0	0/0:23,0:22:55.56:0,56,1016	0/0:43,0:43:99:0,126,2164	0/0:30,0:30:78.22:0,78,1309	0/0:36,0:35:99:0,105,1822	1/1:2,23:25:51.07:703,51,0	1/1:0,26:25:42.14:597,42,0	0/0:25,0:25:75.20:0,75,1234	0/0:35,0:35:99:0,99,1736	0/0:13,0:13:36.02:0,36,597	0/0:24,0:24:72.21:0,72,1326
chr10	69342695	.	T	TTCCCAG	19481.97	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-6.790;DP=680;FS=1.790;HRun=0;HaplotypeScore=137.2611;InbreedingCoeff=0.9994;MQ=61.29;MQ0=3;MQRankSum=-17.703;QD=74.93;ReadPosRankSum=-2.694;VQSLOD=5.1792;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,134,3156	0/0:9,0:9:27.08:0,27,599	0/0:25,0:21:60.04:0,60,1045	0/0:12,0:11:27.05:0,27,428	0/0:16,0:16:48.12:0,48,1009	0/0:15,0:15:42.14:0,42,967	0/0:24,0:24:72.20:0,72,1563	1/1:6,24:33:90.24:2636,90,0	0/0:35,0:35:96.32:0,96,2213	1/1:3,25:29:81.21:2618,81,0	1/1:2,13:16:30.10:1077,30,0	0/0:32,0:32:96.32:0,96,2254	0/0:31,0:31:93.29:0,93,2129	0/0:39,0:39:99:0,117,2739	0/0:35,0:35:99:0,105,2470	0/0:20,0:20:60.20:0,60,1397	0/0:33,0:33:87.27:0,87,1994	1/1:1,16:19:36.12:1295,36,0	1/1:2,13:14:39.09:1249,39,0	1/1:4,14:19:36.12:1278,36,0	1/1:4,14:21:30.10:1027,30,0	0/0:22,0:22:63.22:0,63,1508	1/1:5,11:17:38.71:1367,39,0	1/1:4,16:20:48.16:1644,48,0	0/0:25,0:25:75.18:0,75,1522	1/1:3,21:26:72.14:2167,72,0	1/1:5,19:27:60:2152,60,0	1/1:3,10:15:27.09:971,27,0
chr10	69345264	.	CT	C	2163.76	PASS	AB=0.919;AC=7;AF=0.125;AN=56;BaseQRankSum=9.078;DP=750;FS=3.697;HRun=2;HaplotypeScore=70.9524;InbreedingCoeff=0.8414;MQ=87.18;MQ0=0;MQRankSum=-0.276;QD=22.31;ReadPosRankSum=1.270;VQSLOD=3.6343;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:69,0:69:99:0,202,3011	0/0:11,0:11:33.11:0,33,495	0/0:31,0:31:90.77:0,91,1311	0/0:20,0:20:54.52:0,55,701	0/0:30,0:30:90.30:0,90,1349	0/0:25,0:25:75.25:0,75,1123	0/0:28,0:28:75.23:0,75,1087	0/0:33,0:33:99:0,99,1484	0/0:18,0:18:54.18:0,54,808	1/1:0,25:25:72.23:935,72,0	1/1:0,16:16:45.15:584,45,0	0/0:28,0:28:81.24:0,81,1190	0/0:30,0:30:87.26:0,87,1242	0/0:27,0:27:78.26:0,78,1166	0/0:27,0:27:81.27:0,81,1195	0/0:28,0:28:81.27:0,81,1213	0/0:28,0:28:84.28:0,84,1258	1/1:0,22:22:60.20:779,60,0	0/0:17,0:17:48.16:0,48,719	0/0:18,0:18:54.17:0,54,789	0/0:27,0:27:81.27:0,81,1214	0/0:25,0:25:75.24:0,75,1102	0/0:25,0:25:75.24:0,75,1103	0/0:25,0:25:75.25:0,75,1120	0/0:24,0:24:69.21:0,69,1012	0/1:31,3:34:14.19:14,0,1291	0/0:51,0:50:99:0,154,2286	0/0:8,0:8:24.08:0,24,356
chr10	69345873	.	T	TG	1526.70	PASS	AB=0.669;AC=19;AF=0.339;AN=56;BaseQRankSum=8.923;DP=532;FS=5.784;HRun=8;HaplotypeScore=77.8208;InbreedingCoeff=0.5413;MQ=89.47;MQ0=0;MQRankSum=-3.090;QD=8.39;ReadPosRankSum=-3.080;VQSLOD=1.0718;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,1:38:64.42:0,64,842	0/0:9,0:9:21:0,21,191	0/0:30,0:30:68:0,68,592	0/0:21,0:21:41.89:0,42,406	0/0:18,0:18:45.02:0,45,412	0/0:23,0:23:60.03:0,60,549	0/0:27,0:27:72.03:0,72,658	0/1:5,8:13:2.34:138,0,2	0/0:19,0:19:48.01:0,48,435	1/1:12,1:16:8.31:63,8,0	1/1:5,4:9:3.01:33,3,0	0/0:22,0:23:62.06:0,62,555	0/0:17,0:17:48.03:0,48,439	0/0:17,0:18:47.05:0,47,418	0/0:18,0:18:42.01:0,42,384	0/0:18,0:18:54.03:0,54,494	0/0:37,0:36:93.04:0,93,850	1/1:4,13:17:27.02:293,27,0	0/1:10,6:16:6.81:205,0,7	0/1:4,7:11:6.73:60,0,7	0/1:21,6:27:38.55:174,0,39	0/0:22,0:22:60.02:0,60,545	1/1:4,5:9:0.19:122,0,0	0/1:5,14:21:3.35:244,0,3	0/0:12,0:11:27.01:0,27,247	1/1:16,3:19:3.30:112,3,0	1/1:6,11:17:5.30:190,5,0	1/1:4,3:7:6.49:69,6,0
chr10	69346827	.	CTG	C	951.70	PASS	AB=0.924;AC=25;AF=0.521;AN=48;BaseQRankSum=2.001;DP=616;FS=4.620;HRun=0;HaplotypeScore=80.3901;InbreedingCoeff=0.1096;MQ=72.01;MQ0=10;MQRankSum=0.596;QD=2.81;ReadPosRankSum=2.039;VQSLOD=1.3040;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:31,4:34:17.69:18,0,163	0/1:10,1:11:20.68:21,0,118	./.	./.	0/1:15,1:16:23.71:24,0,76	0/0:16,0:16:21.05:0,21,283	0/0:25,0:31:11.98:0,12,99	./.	0/1:30,0:29:77.15:77,0,143	0/0:24,0:24:21.05:0,21,243	./.	0/0:13,0:13:9.03:0,9,132	0/1:14,2:16:44.82:52,0,45	0/1:20,0:22:19.72:20,0,267	0/1:15,3:18:23.71:24,0,80	0/1:16,0:19:20.73:21,0,69	0/0:27,0:43:45.03:0,45,469	0/0:15,0:15:6.01:0,6,65	1/1:21,2:23:6.02:65,6,0	1/1:9,0:11:11.85:104,12,0	1/1:23,8:30:9.02:98,9,0	0/0:22,0:23:12.04:0,12,172	1/1:6,3:9:12.03:131,12,0	1/1:22,12:34:9.93:256,10,0	0/1:15,2:17:46.49:46,0,323	1/1:18,1:18:3.01:33,3,0	1/1:15,5:20:6.01:65,6,0	1/1:4,3:7:5.14:64,5,0
chr10	69347479	.	A	ATG	998.30	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=-1.970;DP=659;FS=5.047;HRun=0;HaplotypeScore=96.5737;InbreedingCoeff=0.8029;MQ=70.61;MQ0=3;MQRankSum=-3.567;QD=19.57;ReadPosRankSum=-1.842;VQSLOD=3.0596;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,123,1565	0/0:11,0:11:27.08:0,27,338	0/0:29,0:27:18.55:0,19,609	0/0:29,0:28:54.11:0,54,636	0/0:17,0:17:39.12:0,39,496	0/0:28,0:28:66.21:0,66,840	0/0:26,0:26:63.20:0,63,802	0/0:21,0:21:33.10:0,33,408	0/0:23,0:23:54.12:0,54,657	0/0:22,0:22:60.19:0,60,748	0/0:14,0:14:30.07:0,30,346	0/0:30,0:30:69.22:0,69,878	0/0:26,0:26:69.22:0,69,877	0/0:21,0:21:60.18:0,60,747	0/0:28,0:28:69.22:0,69,877	0/0:25,0:25:63.20:0,63,802	0/0:42,0:42:99:0,111,1386	0/0:28,0:28:66.17:0,66,819	0/1:10,0:10:2.77:3,0,208	0/0:18,0:17:47.71:0,48,543	0/0:27,0:27:51.11:0,51,588	0/0:22,0:22:57.15:0,57,690	1/1:6,8:12:24.08:376,24,0	1/1:14,13:24:44.87:742,45,0	0/0:30,0:30:84.27:0,84,1069	0/0:23,0:23:50.39:0,50,581	0/0:15,0:15:36.11:0,36,446	0/0:3,0:3:6.02:0,6,76
chr10	69347494	.	A	AG	2335.84	PASS	AB=0.618;AC=22;AF=0.393;AN=56;BaseQRankSum=3.479;DP=630;FS=7.226;HRun=9;HaplotypeScore=82.9963;InbreedingCoeff=0.7713;MQ=73.01;MQ0=4;MQRankSum=-2.709;QD=10.38;ReadPosRankSum=-6.390;VQSLOD=0.9354;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,111,963	0/0:13,0:13:32.97:0,33,285	0/0:30,0:27:41.77:0,42,345	0/0:22,0:22:29.91:0,30,254	0/0:19,0:19:4.74:0,5,255	0/0:20,0:21:52.99:0,53,443	0/0:23,0:23:53.98:0,54,469	1/1:9,1:13:17.02:108,17,0	0/0:21,0:22:56.01:0,56,471	1/1:7,15:22:19.09:438,19,0	0/1:5,5:10:11.18:84,0,11	0/0:29,0:29:74.96:0,75,646	0/0:25,1:26:35.78:0,36,540	0/0:20,0:20:53.99:0,54,469	0/0:27,0:27:71.93:0,72,619	0/0:24,0:25:67.98:0,68,571	0/0:38,0:38:86.95:0,87,750	1/1:4,17:21:5.04:512,5,0	1/1:11,2:14:32.95:245,33,0	1/1:7,2:21:35:238,35,0	0/1:7,6:28:14.17:194,0,14	0/0:17,0:17:44.99:0,45,390	1/1:14,1:16:1.88:97,2,0	1/1:20,1:28:41.90:265,42,0	0/0:30,0:30:68.92:0,69,590	1/1:10,5:20:23.07:164,23,0	1/1:1,2:21:33.82:170,34,0	1/1:0,0:3:5.68:28,6,0
chr10	69347834	.	C	CCT	5871.26	PASS	AB=1.000;AC=43;AF=0.768;AN=56;BaseQRankSum=-3.509;DP=624;FS=3.926;HRun=0;HaplotypeScore=112.7447;InbreedingCoeff=0.3784;MQ=70.39;MQ0=36;MQRankSum=2.669;QD=12.44;ReadPosRankSum=2.314;VQSLOD=4.8387;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:36,0:36:50.02:761,50,0	1/1:9,0:8:12.02:178,12,0	0/0:39,0:15:2.50:0,2,9	0/0:50,0:25:16.28:0,16,110	0/1:29,0:28:44.25:597,0,44	1/1:13,0:13:26.56:358,27,0	1/1:30,0:29:47.55:747,48,0	1/1:35,0:32:4.67:35,5,0	1/1:13,11:23:8.48:72,8,0	1/1:24,0:20:11.48:61,11,0	0/1:11,0:10:0:0,0,0	1/1:31,0:31:12.38:590,12,0	1/1:11,14:26:6.02:95,6,0	1/1:22,1:21:3.46:452,3,0	1/1:18,0:18:3.38:445,3,0	1/1:16,0:16:27.09:397,27,0	1/1:3,14:17:3.01:48,3,0	1/1:11,0:7:3.44:21,3,0	0/0:19,0:19:1.33:0,1,3	0/1:6,0:6:0:0,0,0	0/0:25,0:25:0.31:0,0,1	1/1:25,0:25:0.45:356,0,0	1/1:13,0:13:2.96:19,3,0	0/0:19,0:18:4.92:0,5,23	1/1:21,0:21:36.11:532,36,0	1/1:31,0:30:6.17:37,6,0	1/1:12,0:12:1.68:23,2,0	1/1:8,0:7:5.46:47,5,0
chr10	69347853	.	CTT	C	4490.88	PASS	AB=0.957;AC=42;AF=0.750;AN=56;BaseQRankSum=-5.674;DP=532;FS=20.936;HRun=3;HaplotypeScore=95.6267;InbreedingCoeff=0.0402;MQ=50.60;MQ0=55;MQRankSum=2.797;QD=9.30;ReadPosRankSum=3.305;VQSLOD=0.6074;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:39,0:37:26.53:248,0,27	0/1:11,0:10:8.50:99,0,8	0/0:22,0:1:2.88:0,3,15	0/1:31,0:8:17.50:18,0,31	0/1:26,0:25:63.96:193,0,64	0/1:16,0:16:30.15:130,0,30	1/1:26,0:24:54.54:384,55,0	1/1:15,0:9:17.93:142,18,0	0/1:22,0:20:0.40:0,0,95	1/1:15,0:11:29.99:268,30,0	1/1:6,0:5:14.98:125,15,0	0/1:28,0:27:31.18:269,0,31	0/0:27,0:25:11.20:0,11,77	0/1:23,0:21:40.62:237,0,41	1/1:20,0:20:2.23:158,2,0	1/1:17,0:14:28.55:199,29,0	0/1:24,0:24:34.57:35,0,92	1/1:8,0:4:8.93:65,9,0	1/1:11,0:11:32.94:281,33,0	1/1:6,0:6:8.94:68,9,0	1/1:18,0:16:14.21:116,14,0	0/1:6,19:24:4.07:139,0,4	1/1:11,0:10:26.71:216,27,0	1/1:22,0:17:17:147,17,0	1/1:23,0:23:21.38:300,21,0	1/1:18,0:16:35.99:323,36,0	1/1:12,0:11:32.68:235,33,0	1/1:9,0:4:11.97:96,12,0
chr10	69347914	.	CTGTCTG	C	4025.87	PASS	AB=1.000;AC=25;AF=0.446;AN=56;BaseQRankSum=9.911;DP=514;FS=7.071;HRun=0;HaplotypeScore=107.7782;InbreedingCoeff=0.8736;MQ=50.08;MQ0=17;MQRankSum=-5.278;QD=20.97;ReadPosRankSum=-2.920;VQSLOD=2.2656;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:31:54.80:0,55,1906	0/0:15,0:15:33.31:0,33,1286	0/0:26,0:8:24.08:0,24,634	0/1:35,0:15:1.23:1,0,419	0/0:16,0:16:39.13:0,39,1324	0/0:21,0:21:48:0,48,1545	0/0:25,0:24:69.23:0,69,2170	1/1:12,2:12:20.85:258,21,0	0/0:17,0:17:51.17:0,51,1598	1/1:2,26:27:75.22:1633,75,0	1/1:0,7:7:3.01:73,3,0	0/0:30,0:30:87.30:0,87,2881	0/0:23,0:22:57.20:0,57,1914	0/0:23,0:23:66.22:0,66,1889	0/0:17,0:17:33.04:0,33,1166	0/0:17,0:16:45.15:0,45,1576	0/0:23,0:22:50.20:0,50,1406	1/1:2,6:7:12.04:220,12,0	1/1:3,6:9:13.27:196,13,0	1/1:4,10:13:9.03:166,9,0	1/1:12,2:15:5.98:74,6,0	0/0:16,0:16:36.07:0,36,1217	1/1:5,0:7:12.04:218,12,0	1/1:10,1:14:5.95:112,6,0	0/0:20,0:20:40.26:0,40,1732	1/1:2,12:16:35.04:533,35,0	1/1:4,0:8:18.06:361,18,0	1/1:2,7:10:9.03:180,9,0
chr10	69349921	.	T	TCA	1854.76	PASS	AB=0.871;AC=12;AF=0.214;AN=56;BaseQRankSum=14.664;DP=902;FS=151.274;HRun=0;HaplotypeScore=281.8185;InbreedingCoeff=-0.2674;MQ=60.33;MQ0=1;MQRankSum=-13.493;QD=5.15;ReadPosRankSum=2.339;VQSLOD=-0.3643;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,111,1651	0/1:11,2:13:39.87:40,0,423	0/0:40,0:38:99:0,105,1492	0/0:23,0:22:62.02:0,62,896	0/1:26,11:37:99:307,0,658	0/1:25,3:28:99:166,0,824	0/0:36,0:36:51.72:0,52,1266	0/0:26,0:26:69.19:0,69,1013	0/0:44,0:44:99:0,113,1719	0/1:40,4:44:99:165,0,1265	0/1:23,5:28:89.49:89,0,730	0/0:36,1:37:34.57:0,35,1363	0/0:31,1:32:13.73:0,14,1208	0/0:34,0:34:93.27:0,93,1395	0/0:44,1:45:48.51:0,49,1762	0/0:42,1:43:15.28:0,15,1591	0/1:23,2:25:39.24:39,0,895	0/0:20,0:20:56.83:0,57,864	0/1:16,1:17:38.16:38,0,466	0/1:20,9:29:99:309,0,700	0/0:38,0:38:90.22:0,90,1283	0/1:36,3:39:29.13:29,0,1346	0/0:11,0:11:15.30:0,15,376	0/0:44,0:44:99:0,105,1562	0/1:32,9:41:99:437,0,470	0/1:32,9:41:99:380,0,982	0/0:28,0:27:78.26:0,78,1183	0/1:17,1:18:4.09:4,0,653
chr10	69349924	.	T	TGC	736.93	PASS	AB=0.849;AC=9;AF=0.161;AN=56;BaseQRankSum=10.325;DP=849;FS=78.051;HRun=0;HaplotypeScore=189.8688;InbreedingCoeff=-0.1942;MQ=62.70;MQ0=1;MQRankSum=-8.956;QD=3.06;ReadPosRankSum=2.615;VQSLOD=0.0505;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:94.10:0,94,1790	0/1:11,2:13:41.44:41,0,453	0/0:35,0:34:99:0,102,1500	0/0:23,0:22:56.33:0,56,905	0/1:19,11:30:18.05:18,0,701	0/1:21,3:24:99:107,0,788	0/0:33,0:34:90.19:0,90,1397	0/0:26,0:26:69.16:0,69,1068	0/0:40,0:40:99:0,114,1847	0/1:35,4:40:99:140,0,1327	0/1:21,5:26:39.83:40,0,784	0/0:36,1:37:99:0,99,1544	0/0:31,1:32:33.45:0,33,1360	0/0:34,0:34:99:0,99,1538	0/0:44,1:45:66.11:0,66,1839	0/0:41,1:42:99:0,117,1802	0/1:22,2:24:42.16:42,0,992	0/0:20,0:20:57.19:0,57,929	0/0:17,0:17:3.95:0,4,552	0/0:17,9:26:54.11:0,54,799	0/0:40,0:40:84.13:0,84,1271	0/0:33,3:36:32.20:0,32,1449	0/0:10,0:10:27.08:0,27,413	0/0:46,0:46:99:0,120,1793	0/1:21,9:31:99:148,0,491	0/1:26,9:35:99:332,0,1093	0/0:26,0:25:75.08:0,75,1127	0/1:17,1:18:6.96:7,0,729
chr10	69350012	.	TATACATACATACATAC	T	4111.19	PASS	AB=0.721;AC=17;AF=0.304;AN=56;BaseQRankSum=3.506;DP=818;FS=8.997;HRun=0;HaplotypeScore=343.3340;InbreedingCoeff=0.8515;MQ=62.03;MQ0=8;MQRankSum=-6.246;QD=22.47;ReadPosRankSum=-0.169;VQSLOD=0.7945;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:90.31:0,90,6140	0/0:10,0:10:12.04:0,12,826	0/0:41,0:24:9.87:0,10,179	0/0:42,0:28:30.09:0,30,752	0/0:11,0:24:44.57:0,45,2515	0/0:33,0:34:78.27:0,78,5465	0/0:44,0:44:90.19:0,90,4057	1/1:23,0:23:18.02:226,18,0	0/0:31,0:31:72.22:0,72,4323	0/0:16,0:22:10.54:0,11,540	0/0:10,0:14:12.04:0,12,193	0/0:43,0:44:81.26:0,81,5234	0/0:38,0:38:72.16:0,72,3964	0/0:36,0:36:78.25:0,78,5121	0/0:49,0:50:90.31:0,90,5871	0/0:36,0:36:75.23:0,75,4636	0/0:37,0:37:90.29:0,90,4926	0/0:15,0:20:15.01:0,15,239	1/1:14,2:15:21.03:529,21,0	1/1:7,9:16:21.07:762,21,0	1/1:17,15:32:15.05:353,15,0	0/0:28,0:28:45.14:0,45,2691	1/1:5,12:17:12.04:472,12,0	0/1:19,12:31:14.62:15,0,41	0/0:29,0:29:39.13:0,39,2676	1/1:23,1:24:33.10:630,33,0	1/1:13,9:22:24.08:1055,24,0	1/1:2,0:2:3.01:69,3,0
chr10	69354352	.	T	TACC	2306.09	PASS	AB=0.868;AC=18;AF=0.321;AN=56;BaseQRankSum=-6.357;DP=516;FS=6.800;HRun=0;HaplotypeScore=85.1315;InbreedingCoeff=0.5583;MQ=81.28;MQ0=6;MQRankSum=0.683;QD=13.49;ReadPosRankSum=-2.447;VQSLOD=2.2701;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:42.14:0,42,563	0/0:7,0:7:12.04:0,12,162	0/0:31,0:24:3.01:0,3,41	0/0:35,0:32:2.10:0,2,30	0/0:10,0:10:20.96:0,21,266	0/0:16,0:16:24.03:0,24,290	0/0:26,0:26:36.10:0,36,469	1/1:18,0:18:3.01:43,3,0	0/0:28,0:28:39.13:0,39,523	0/0:13,0:30:11.83:0,12,195	0/1:5,0:11:8.11:8,0,45	0/0:18,0:18:32.14:0,32,413	0/0:25,0:25:57.17:0,57,748	0/0:18,0:18:39.13:0,39,528	0/0:18,0:18:35.48:0,35,450	0/0:20,0:20:45.15:0,45,609	0/1:11,0:11:9.64:10,0,297	0/0:4,0:12:5.92:0,6,39	0/1:11,3:12:28.87:84,0,29	1/1:7,3:10:9.03:176,9,0	1/1:17,11:30:15.05:294,15,0	0/0:12,0:12:15.05:0,15,204	1/1:8,1:9:11.25:168,11,0	1/1:7,18:25:36.12:704,36,0	0/0:17,0:17:15.05:0,15,203	1/1:8,11:19:27.45:389,27,0	1/1:8,5:13:15.05:286,15,0	0/1:5,6:11:19.06:332,0,19
chr10	69356794	.	C	CCAAAG	19066.12	PASS	AB=0.553;AC=23;AF=0.411;AN=56;BaseQRankSum=-11.058;DP=671;FS=0.000;HRun=0;HaplotypeScore=118.2345;InbreedingCoeff=0.9311;MQ=83.18;MQ0=0;MQRankSum=-8.736;QD=70.10;ReadPosRankSum=-0.949;VQSLOD=5.9750;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,111,2282	0/0:12,0:12:33.11:0,33,667	0/0:24,0:24:66.21:0,66,1270	0/0:27,0:27:60.16:0,60,1057	0/0:26,0:26:75.26:0,75,1554	0/0:19,0:19:57.18:0,57,1144	0/0:26,0:26:69.19:0,69,1284	1/1:11,19:30:78.27:2311,78,0	0/0:26,0:26:75.26:0,75,1503	1/1:10,24:34:96.33:2645,96,0	1/1:5,12:19:45.15:1263,45,0	0/0:20,0:20:60.16:0,60,1202	0/0:26,0:26:72.21:0,72,1381	0/0:27,0:27:69.24:0,69,1389	0/0:25,0:25:69.24:0,69,1395	0/0:22,0:22:66.23:0,66,1352	0/0:34,0:34:99:0,102,2077	1/1:2,19:22:57.20:1752,57,0	1/1:4,19:23:60.20:1727,60,0	1/1:4,14:18:45.15:1158,45,0	1/1:11,23:34:69.23:1687,69,0	0/0:23,0:23:66.22:0,66,1332	1/1:6,20:26:60.68:1638,61,0	0/1:4,17:21:11.03:1346,0,11	0/0:23,0:23:60.21:0,60,1244	1/1:4,16:20:57.19:1660,57,0	1/1:7,11:17:42.14:1234,42,0	1/1:0,7:7:21.07:645,21,0
chr10	69358255	.	AG	A	4007.50	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=10.265;DP=641;FS=9.190;HRun=9;HaplotypeScore=64.0071;InbreedingCoeff=0.9141;MQ=69.26;MQ0=0;MQRankSum=-0.838;QD=19.45;ReadPosRankSum=0.647;VQSLOD=3.6351;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:68.70:0,69,785	0/0:13,0:13:30.09:0,30,346	0/1:13,0:12:7.57:8,0,148	0/0:4,0:4:5.60:0,6,42	0/0:29,0:32:69.12:0,69,747	0/0:20,0:20:39.11:0,39,442	0/0:23,0:23:57.17:0,57,656	1/1:4,18:22:45.01:412,45,0	0/0:21,0:21:60.15:0,60,673	0/0:22,0:22:48.14:0,48,554	0/0:16,0:16:39.07:0,39,427	0/0:37,0:38:96.10:0,96,1077	0/0:29,0:29:84.19:0,84,944	0/0:28,0:28:69.18:0,69,781	0/0:31,0:31:87.25:0,87,993	0/0:26,0:26:75.21:0,75,855	0/0:29,0:29:78.19:0,78,870	0/0:25,0:27:77.88:0,78,849	1/1:4,7:11:21:188,21,0	1/1:3,19:22:56.85:495,57,0	1/1:6,30:36:90.04:824,90,0	0/0:20,0:20:48.07:0,48,521	1/1:4,11:15:27.01:247,27,0	1/1:5,21:26:57.02:522,57,0	0/0:28,0:28:60.17:0,60,680	1/1:7,21:28:36.68:517,37,0	1/1:1,21:22:60.03:549,60,0	1/1:2,9:11:27.01:247,27,0
chr10	69361580	.	C	CA	3045.81	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-10.437;DP=753;FS=13.623;HRun=0;HaplotypeScore=73.6331;InbreedingCoeff=0.9997;MQ=80.99;MQ0=0;MQRankSum=-1.429;QD=39.05;ReadPosRankSum=1.786;VQSLOD=2.9336;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:60,0:60:99:0,168,2192	0/0:17,0:17:51.17:0,51,712	0/0:22,0:22:63.05:0,63,783	0/0:16,0:16:47.92:0,48,578	0/0:14,0:14:36.12:0,36,502	0/0:26,0:26:77.43:0,77,1030	0/0:40,0:40:99:0,120,1672	0/0:34,0:34:99:0,99,1293	0/0:29,0:29:84.22:0,84,1134	1/1:1,33:34:96.28:1444,96,0	1/1:0,18:18:41.88:670,42,0	0/0:32,0:32:96.31:0,96,1322	0/0:21,0:21:63.21:0,63,879	0/0:34,0:34:99:0,99,1319	0/0:26,0:26:78.01:0,78,1037	0/0:29,0:29:87.28:0,87,1191	0/0:38,0:38:99:0,114,1527	1/1:0,26:26:69.20:1076,69,0	0/0:17,0:17:48.16:0,48,666	0/0:25,0:25:68.74:0,69,864	0/0:31,0:31:93.31:0,93,1293	0/0:23,0:23:53.07:0,53,649	0/0:17,0:17:44.87:0,45,521	0/0:34,0:34:96.31:0,96,1321	0/0:19,0:19:56.72:0,57,723	0/0:26,1:27:30.28:0,30,967	0/0:31,0:31:93.31:0,93,1294	0/0:13,0:13:39.13:0,39,544
chr10	69362054	.	T	TA	10638.26	PASS	AB=1.000;AC=55;AF=0.982;AN=56;BaseQRankSum=1.222;DP=561;FS=0.000;HRun=1;HaplotypeScore=427.2281;InbreedingCoeff=-0.0231;MQ=38.91;MQ0=0;MQRankSum=-1.718;QD=18.96;ReadPosRankSum=1.548;VQSLOD=2.3905;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,33:33:82.25:565,82,0	1/1:0,10:10:26.69:199,27,0	1/1:3,1:4:2.81:25,3,0	0/1:3,0:3:18.69:31,0,19	1/1:0,25:25:46.42:256,46,0	1/1:0,23:23:67.73:436,68,0	1/1:3,22:25:61.99:427,62,0	1/1:4,15:19:39.03:434,39,0	1/1:1,18:19:53.42:421,53,0	1/1:2,20:22:61.86:532,62,0	1/1:1,17:18:48.52:273,49,0	1/1:2,25:27:75.67:541,76,0	1/1:2,34:36:99:629,102,0	1/1:0,22:22:61.93:475,62,0	1/1:1,28:29:79.72:637,80,0	1/1:0,22:22:65.26:521,65,0	1/1:1,16:17:38.07:272,38,0	1/1:2,9:11:26.84:240,27,0	1/1:3,11:14:33:342,33,0	1/1:1,18:19:47.14:293,47,0	1/1:2,11:13:29.38:225,29,0	1/1:3,23:26:60.69:351,61,0	1/1:3,16:19:46.80:272,47,0	1/1:0,13:13:15.55:137,16,0	1/1:2,16:18:47.21:339,47,0	1/1:2,34:37:99:951,104,0	1/1:1,32:31:94.65:704,95,0	1/1:1,2:3:9:110,9,0
chr10	69362994	.	CGT	C	617.86	PASS	AB=0.899;AC=15;AF=0.278;AN=54;BaseQRankSum=2.543;DP=501;FS=1.607;HRun=0;HaplotypeScore=80.6741;InbreedingCoeff=-0.0760;MQ=55.87;MQ0=9;MQRankSum=2.580;QD=2.50;ReadPosRankSum=-0.661;VQSLOD=1.2054;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:29,1:31:11.58:12,0,355	0/1:9,3:11:37.92:55,0,38	./.	0/0:13,0:6:3:0,3,25	0/1:22,1:23:3.94:4,0,332	0/1:19,1:20:9.88:10,0,262	0/1:15,6:22:99:135,0,216	0/0:35,0:35:44.69:0,45,441	0/1:18,1:19:0.42:0,0,418	0/0:16,0:14:14.99:0,15,152	0/1:17,0:17:0:0,0,0	1/1:10,12:22:33.09:369,33,0	0/1:13,3:17:54.36:54,0,221	0/0:11,0:11:7.83:0,8,77	0/0:10,0:17:18:0,18,160	0/1:11,1:12:6.50:6,0,262	0/1:25,3:27:85.89:86,0,447	0/0:13,0:12:7.74:0,8,81	0/0:12,0:16:14.96:0,15,121	0/0:25,0:25:2.48:0,2,27	1/1:8,0:7:0.47:1,0,0	0/1:14,1:13:21.66:22,0,64	0/0:6,0:13:3:0,3,26	0/0:10,0:17:3.01:0,3,37	0/0:21,0:21:26.53:0,27,323	0/0:11,0:15:15.83:0,16,139	0/0:16,0:14:11.93:0,12,91	0/0:7,0:9:3:0,3,26
chr10	69363218	.	AGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	A	1700.58	PASS	AB=0.903;AC=8;AF=0.154;AN=52;BaseQRankSum=2.460;DP=517;FS=10.210;HRun=0;HaplotypeScore=305.8293;InbreedingCoeff=0.3315;MQ=66.44;MQ0=27;MQRankSum=-0.651;QD=16.35;ReadPosRankSum=0.525;VQSLOD=0.9665;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:22:22.30:0,22,944	0/0:7,0:7:15.05:0,15,945	0/0:39,0:18:15.05:0,15,388	0/0:57,0:25:12.51:0,13,610	0/0:12,0:12:27.09:0,27,2407	0/0:19,0:17:21.07:0,21,2063	0/0:29,0:29:48.62:0,49,3572	0/1:24,0:23:14.98:45,0,15	0/0:13,0:12:24.08:0,24,2374	0/0:15,0:12:24.08:0,24,1989	0/0:6,0:6:6.02:0,6,512	0/0:22,0:21:29.09:0,29,2146	0/0:16,0:15:18.06:0,18,1296	0/0:18,0:17:33.11:0,33,3545	0/0:21,0:19:21.05:0,21,1347	0/0:22,0:21:36.08:0,36,3211	0/0:23,0:23:46.37:0,46,3317	0/0:7,0:6:18.06:0,18,1963	0/1:15,0:16:11.98:240,0,12	0/0:6,3:10:3.01:0,3,262	./.	0/0:15,0:15:24.08:0,24,2010	1/1:10,1:15:11.25:263,11,0	0/1:20,0:21:41.94:42,0,284	0/0:16,0:14:21.06:0,21,1981	0/1:9,6:14:99:565,0,573	1/1:8,5:11:9.03:682,9,0	./.
chr10	69364680	.	CT	C	1266.04	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.716;DP=678;FS=0.000;HRun=7;HaplotypeScore=97.3163;InbreedingCoeff=0.9937;MQ=77.35;MQ0=0;MQRankSum=-4.913;QD=22.61;ReadPosRankSum=0.905;VQSLOD=3.1023;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:62,0:62:99:0,187,2298	0/0:10,0:10:30.09:0,30,365	0/0:15,0:15:33.02:0,33,363	0/0:14,0:14:30.08:0,30,360	0/0:30,0:30:90.28:0,90,1115	0/0:22,0:22:60.19:0,60,755	0/0:21,0:21:60.19:0,60,755	0/0:26,0:26:63.18:0,63,770	0/0:24,0:24:66.21:0,66,830	1/1:2,30:32:81.17:826,81,0	1/1:0,9:9:15.03:153,15,0	0/0:34,0:34:99:0,102,1270	0/0:26,0:26:69.19:0,69,852	0/0:22,0:22:57.18:0,57,714	0/0:30,0:30:81.25:0,81,1007	0/0:28,0:28:75.24:0,75,944	0/0:28,0:28:84.20:0,84,1011	1/1:0,15:15:42.10:428,42,0	0/0:13,0:13:36.12:0,36,453	0/0:23,0:23:66.21:0,66,830	0/0:33,0:33:87.27:0,87,1082	0/0:27,0:27:75.23:0,75,932	0/0:34,0:34:96.30:0,96,1196	0/0:18,0:18:48.15:0,48,604	0/0:24,0:24:69.21:0,69,856	0/0:26,0:26:75.24:0,75,944	0/0:15,0:15:36.10:0,36,439	0/0:17,0:17:48.15:0,48,604
chr10	69364712	.	TGCCCAGGCTAGACTTGAACTTACTTTA	T	4040.61	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=7.563;DP=702;FS=4.397;HRun=0;HaplotypeScore=484.7089;InbreedingCoeff=0.9756;MQ=74.93;MQ0=0;MQRankSum=-7.003;QD=98.55;ReadPosRankSum=3.021;VQSLOD=1.8340;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:57:99:0,166,16423	0/0:10,0:10:21.07:0,21,2172	0/0:18,0:19:35.86:0,36,2119	0/0:24,0:24:57:0,57,3262	0/0:26,0:26:63.22:0,63,6654	0/0:22,0:22:63.22:0,63,6015	0/0:27,0:27:69.24:0,69,7252	0/0:42,0:42:99:0,111,8994	0/0:26,0:26:75.26:0,75,7910	1/1:12,8:20:30.10:1947,30,0	1/1:3,8:11:21.07:1451,21,0	0/0:37,0:37:99:0,99,9482	0/0:33,0:33:90.31:0,90,9604	0/0:25,0:25:69.24:0,69,8047	0/0:30,0:30:87.30:0,87,9518	0/0:32,0:32:90.30:0,90,9992	0/0:33,0:33:93.32:0,93,10051	1/1:7,3:10:9.03:642,9,0	0/0:19,0:19:45.14:0,45,3678	0/0:24,0:24:63.22:0,63,5889	0/0:27,0:27:75.26:0,75,8252	0/0:26,0:26:66.23:0,66,7073	0/0:27,0:27:75.26:0,75,7408	0/0:18,0:18:54.17:0,54,5738	0/0:22,0:22:63.22:0,63,6632	0/0:26,0:26:69.23:0,69,7382	0/0:17,0:17:51.16:0,51,5585	0/0:12,0:12:33.11:0,33,3321
chr10	69367773	.	A	AT	1929.71	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-8.116;DP=593;FS=11.096;HRun=8;HaplotypeScore=56.3068;InbreedingCoeff=0.9872;MQ=73.99;MQ0=0;MQRankSum=-0.841;QD=27.18;ReadPosRankSum=-0.573;VQSLOD=3.4769;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:54.91:0,55,496	0/0:13,0:13:39.01:0,39,352	0/0:11,0:11:23.92:0,24,202	0/0:12,0:12:27.01:0,27,247	0/0:15,0:15:42:0,42,378	0/0:30,1:31:49.43:0,49,707	0/0:15,0:15:39.01:0,39,357	0/0:26,0:26:51.01:0,51,467	0/0:29,0:29:75.04:0,75,686	1/1:1,25:26:72.16:805,72,0	1/1:2,19:22:56.96:623,57,0	0/0:14,0:14:39.02:0,39,357	0/0:32,0:32:78.04:0,78,714	0/0:27,0:27:78.04:0,78,713	0/0:21,0:21:63.03:0,63,577	0/0:30,0:30:81.03:0,81,741	0/0:17,0:17:45.02:0,45,412	1/1:5,18:23:57.14:645,57,0	0/0:17,0:17:36.01:0,36,329	0/0:22,0:22:60.01:0,60,544	0/0:20,0:20:60.02:0,60,544	0/0:22,0:22:60.02:0,60,544	0/0:15,0:15:42.02:0,42,384	0/0:17,0:17:48.03:0,48,439	0/0:23,0:23:57.01:0,57,521	0/0:27,2:29:11.78:0,12,610	0/0:30,0:30:69.01:0,69,627	0/0:13,0:13:36.02:0,36,330
chr10	69368675	.	G	GTT	5614.17	PASS	AB=0.581;AC=17;AF=0.304;AN=56;BaseQRankSum=-9.521;DP=721;FS=7.402;HRun=11;HaplotypeScore=92.0017;InbreedingCoeff=0.9171;MQ=69.55;MQ0=2;MQRankSum=2.491;QD=22.64;ReadPosRankSum=-2.048;VQSLOD=3.7928;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:2,0:27:55.04:0,55,242	0/0:5,0:6:11.72:0,12,99	0/0:19,0:17:18.27:0,18,171	0/0:11,0:10:14.83:0,15,138	0/0:2,0:27:50.43:0,50,228	0/0:37,0:37:83.97:0,84,804	0/0:13,0:14:38.79:0,39,360	1/1:13,28:43:77.61:1134,78,0	0/0:24,0:24:69.11:0,69,667	0/0:30,0:31:68.75:0,69,651	0/0:19,0:20:54:0,54,512	0/0:32,0:33:71.94:0,72,747	0/0:31,0:32:63.76:0,64,773	0/0:21,0:21:56.73:0,57,534	0/0:35,0:36:87:0,87,822	0/0:17,0:18:40.66:0,41,418	0/0:39,0:39:99:0,105,1017	0/0:21,0:21:44.56:0,45,434	1/1:7,10:18:32.56:418,33,0	1/1:3,26:30:70.15:911,70,0	1/1:2,13:17:23.56:298,24,0	0/0:25,0:26:35.19:0,35,509	1/1:7,15:25:32.37:393,32,0	1/1:1,20:23:48.15:666,48,0	0/0:30,0:30:58.88:0,59,734	0/1:10,24:36:5.06:774,0,5	1/1:9,36:46:68.46:891,68,0	1/1:3,5:9:9.03:130,9,0
chr10	69370276	.	G	GA	194.06	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=-2.289;DP=261;FS=2.964;HRun=9;HaplotypeScore=53.0348;InbreedingCoeff=0.4073;MQ=57.77;MQ0=1;MQRankSum=1.637;QD=8.82;ReadPosRankSum=-1.958;VQSLOD=1.1559;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:8,0:8:21:0,21,179	0/0:5,0:5:8.99:0,9,78	0/1:8,0:6:7.01:7,0,13	0/0:18,0:13:30.05:0,30,232	0/0:24,0:25:57.83:0,58,480	0/0:9,0:9:20.78:0,21,180	0/0:11,0:11:29.98:0,30,257	1/1:3,11:13:4.51:272,5,0	0/0:7,0:7:16.81:0,17,134	0/0:10,0:10:29.97:0,30,256	0/0:10,0:10:26.98:0,27,232	0/0:1,0:1:3:0,3,26	0/0:6,0:6:14.99:0,15,129	0/0:6,0:6:17.99:0,18,153	0/0:6,0:6:13.23:0,13,104	0/0:8,0:8:20.98:0,21,179	0/0:8,0:8:8.93:0,9,70	0/0:8,0:8:16.81:0,17,134	0/0:13,0:13:26.98:0,27,231	0/0:6,0:6:12:0,12,103	0/0:8,0:8:23.99:0,24,206	0/0:8,0:8:17.99:0,18,154	0/0:11,0:11:17.34:0,17,131	0/0:8,0:8:14.98:0,15,128	0/0:6,0:6:15:0,15,129	0/0:13,0:13:29.97:0,30,257	0/0:12,0:12:35.79:0,36,296	0/0:7,0:7:17.90:0,18,152
chr10	69370313	.	TTCTC	T	391.83	PASS	AB=1.000;AC=14;AF=0.292;AN=48;BaseQRankSum=2.219;DP=422;FS=0.000;HRun=0;HaplotypeScore=85.7659;InbreedingCoeff=-0.0224;MQ=46.09;MQ0=26;MQRankSum=0.501;QD=2.58;ReadPosRankSum=1.162;VQSLOD=1.5471;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:7,5:12:0:0,0,0	0/1:10,0:10:23.04:23,0,97	./.	./.	1/1:26,0:27:18.06:232,18,0	0/0:13,0:13:6.02:0,6,76	0/1:22,0:20:27.93:28,0,161	./.	0/1:12,0:12:35.16:35,0,147	0/0:16,0:15:22.78:0,23,456	0/0:13,0:12:2.08:0,2,37	0/0:7,0:5:5.93:0,6,70	0/0:12,0:12:22.19:0,22,255	0/0:9,0:7:3.01:0,3,46	0/0:9,0:9:12.59:0,13,169	1/1:11,0:10:2.55:10,3,0	0/0:16,0:16:5.94:0,6,88	1/1:6,0:9:3.01:33,3,0	0/1:10,0:9:30.12:30,0,153	0/1:9,0:9:35.65:36,0,105	0/0:13,0:11:5.44:0,5,33	0/0:13,0:13:18.06:0,18,329	./.	0/1:14,0:11:20.98:21,0,34	0/1:9,0:9:28.70:29,0,52	0/0:16,0:14:8.68:0,9,175	0/1:19,0:18:55.26:55,0,128	0/0:8,0:8:6.02:0,6,91
chr10	69372196	.	A	AT	5851.20	PASS	AB=0.917;AC=29;AF=0.518;AN=56;BaseQRankSum=11.207;DP=602;FS=0.000;HRun=9;HaplotypeScore=80.9336;InbreedingCoeff=0.9011;MQ=77.72;MQ0=0;MQRankSum=-0.006;QD=19.90;ReadPosRankSum=0.359;VQSLOD=5.1762;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,0:27:57.31:293,57,0	0/0:12,0:12:35.99:0,36,313	0/0:15,0:16:7.54:0,8,224	0/0:14,0:16:36.04:0,36,258	1/1:4,1:25:55.80:297,56,0	0/0:28,0:28:74.93:0,75,644	0/0:19,0:19:41.95:0,42,361	0/0:25,0:25:59.96:0,60,518	0/0:24,0:24:65.93:0,66,560	1/1:8,12:20:5.55:375,6,0	1/1:2,22:24:37.48:519,37,0	0/1:10,1:11:3.18:3,0,204	0/0:31,0:31:80.96:0,81,700	0/0:23,0:23:59.97:0,60,521	0/0:35,1:36:71.87:0,72,852	0/0:39,0:39:99:0,111,964	1/1:5,18:23:25.11:505,25,0	1/1:4,11:15:7.04:306,7,0	1/1:7,13:20:10.21:365,10,0	1/1:1,14:15:42.04:435,42,0	1/1:1,7:8:15.04:165,15,0	0/0:20,0:20:53.99:0,54,469	1/1:7,14:21:42.99:458,43,0	1/1:6,14:20:14.97:430,15,0	0/0:16,1:17:17.81:0,18,383	1/1:1,18:19:54.10:573,54,0	1/1:7,30:37:34.15:894,34,0	1/1:2,7:9:21.06:232,21,0
chr10	69374374	.	G	GGTGGCA	876.51	PASS	AC=4;AF=0.077;AN=52;BaseQRankSum=0.409;DP=383;FS=1.347;HRun=0;HaplotypeScore=85.1688;InbreedingCoeff=0.7477;MQ=77.14;MQ0=0;MQRankSum=-4.541;QD=20.87;ReadPosRankSum=-0.118;VQSLOD=2.6504;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:54.15:0,54,1086	0/0:10,0:10:21.07:0,21,385	0/0:7,0:7:15.05:0,15,307	0/0:12,0:12:8.93:0,9,250	0/0:9,0:9:12.04:0,12,237	0/0:3,0:3:6.01:0,6,92	0/0:27,0:27:72.08:0,72,1249	0/0:17,0:17:36.10:0,36,619	0/0:6,0:6:18.06:0,18,394	0/0:5,0:5:3:0,3,25	./.	0/0:17,0:17:41.97:0,42,682	0/0:5,0:5:15.01:0,15,263	0/0:15,0:15:39.09:0,39,786	0/0:8,0:8:20.95:0,21,327	0/0:5,0:5:15.04:0,15,272	0/0:20,0:20:51.14:0,51,1030	0/0:20,0:19:50.98:0,51,937	0/0:16,0:16:26.70:0,27,423	./.	0/0:53,0:53:99:0,105,1798	0/0:7,0:7:11.82:0,12,165	1/1:2,5:8:12.04:406,12,0	1/1:11,23:34:18.06:583,18,0	0/0:17,0:17:30:0,30,508	0/0:22,0:22:29.71:0,30,513	0/0:4,0:4:12.04:0,12,264	0/0:4,0:4:9.03:0,9,198
chr10	69375927	.	GAAATATTCTATTC	G	3044.31	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.710;DP=771;FS=9.470;HRun=0;HaplotypeScore=278.4808;InbreedingCoeff=0.9997;MQ=83.18;MQ0=0;MQRankSum=-8.658;QD=95.13;ReadPosRankSum=2.788;VQSLOD=2.3047;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,151,9368	0/0:16,0:16:48.15:0,48,3035	0/0:33,0:33:96.33:0,96,5342	0/0:16,0:16:46.96:0,47,2188	0/0:27,0:27:81.25:0,81,4576	0/0:34,0:34:99:0,102,6425	0/0:25,0:25:75.26:0,75,4561	0/0:40,0:40:99:0,120,6432	0/0:28,0:28:84.29:0,84,5401	0/0:34,0:34:99:0,99,6222	0/0:19,0:19:57.20:0,57,3653	0/0:24,0:24:72.25:0,72,4445	0/0:27,0:27:81.28:0,81,5206	0/0:28,0:28:84.29:0,84,4979	0/0:30,0:30:90.31:0,90,5303	0/0:27,0:27:81.28:0,81,5048	0/0:28,0:28:84.29:0,84,4957	0/0:19,0:19:57.20:0,57,3700	0/0:21,0:21:63.22:0,63,3530	0/0:28,0:28:84.27:0,84,5110	0/0:39,0:39:99:0,117,7483	0/0:33,0:33:99:0,99,6174	1/1:1,17:18:51.18:2010,51,0	1/1:0,14:14:30.10:1156,30,0	0/0:25,0:25:75.26:0,75,4705	0/0:38,0:38:99:0,111,6216	0/0:37,0:37:99:0,111,6802	0/0:13,0:13:39.13:0,39,2218
chr10	69380130	.	ACT	A	1687.70	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.312;DP=725;FS=3.857;HRun=0;HaplotypeScore=91.9649;InbreedingCoeff=0.9958;MQ=84.50;MQ0=0;MQRankSum=-1.482;QD=35.91;ReadPosRankSum=1.432;VQSLOD=5.9948;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:99:0,132,2407	0/0:6,0:6:18.05:0,18,306	0/0:20,0:20:57.19:0,57,1032	0/0:31,0:31:81.22:0,81,1447	0/0:33,0:33:99:0,99,1779	0/0:34,0:34:90.31:0,90,1669	0/0:32,0:32:96.33:0,96,1784	0/0:37,0:37:99:0,111,1870	0/0:29,0:29:84.27:0,84,1527	0/0:21,0:21:60.21:0,60,1103	0/0:21,0:21:57.18:0,57,1022	0/0:36,0:36:99:0,105,1966	0/0:20,0:20:60.21:0,60,1124	0/0:24,0:24:69.24:0,69,1292	0/0:29,0:29:87.28:0,87,1581	0/0:25,0:25:75.24:0,75,1373	0/0:27,0:27:78.27:0,78,1447	0/0:19,0:19:57.20:0,57,1066	0/0:19,0:19:51.16:0,51,904	0/0:25,0:25:75.20:0,75,1278	0/0:27,0:27:81.26:0,81,1462	0/0:30,0:30:87.30:0,87,1621	1/1:1,22:23:60.14:883,60,0	1/1:0,24:24:63.21:926,63,0	0/0:14,0:14:42.14:0,42,787	0/0:25,0:25:72.23:0,72,1291	0/0:34,0:33:99:0,102,1892	0/0:14,0:14:42.11:0,42,738
chr10	69381042	.	G	GTTGTT	3393.92	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-4.854;DP=758;FS=0.000;HRun=0;HaplotypeScore=138.1590;InbreedingCoeff=0.9259;MQ=72.05;MQ0=5;MQRankSum=-0.072;QD=46.49;ReadPosRankSum=0.361;VQSLOD=3.7834;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,20:30:48.16:1321,48,0	0/0:22,0:22:45.12:0,45,765	0/0:34,0:23:11.29:0,11,266	0/0:57,0:38:26.32:0,26,386	1/1:15,25:43:81.19:2073,81,0	0/0:29,0:29:60.21:0,60,1107	0/0:25,0:25:54.09:0,54,896	0/0:27,0:27:45.15:0,45,775	0/0:22,0:22:36.10:0,36,599	0/0:36,0:36:66.22:0,66,1185	0/0:17,0:17:36.12:0,36,657	0/0:22,0:22:41.97:0,42,730	0/0:22,0:22:51.17:0,51,933	0/0:15,0:15:30.09:0,30,497	0/0:27,0:27:63.21:0,63,1103	0/0:23,0:23:45.15:0,45,835	0/0:27,0:27:66.20:0,66,1097	0/0:27,0:27:47.54:0,48,850	0/0:26,0:24:15.05:0,15,272	0/0:25,0:25:60.19:0,60,1037	0/0:29,0:29:60.17:0,60,1023	0/0:19,0:19:33.09:0,33,556	0/0:35,0:35:75.26:0,75,1352	0/0:18,0:18:6.30:0,6,574	0/0:24,0:24:41.96:0,42,897	0/0:27,0:27:51.17:0,51,881	0/0:33,0:33:63.20:0,63,1067	0/0:16,0:15:45.15:0,45,789
chr10	69381937	.	A	ACT	651.57	PASS	AB=0.929;AC=34;AF=0.680;AN=50;BaseQRankSum=-3.397;DP=587;FS=2.515;HRun=0;HaplotypeScore=110.6645;InbreedingCoeff=0.2784;MQ=53.10;MQ0=32;MQRankSum=0.664;QD=1.66;ReadPosRankSum=0.183;VQSLOD=2.3229;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:16:2.93:0,3,20	1/1:10,0:10:2.96:25,3,0	./.	./.	./.	1/1:31,0:30:7.14:71,7,0	1/1:28,0:27:11.41:85,11,0	1/1:43,0:42:6.19:34,6,0	0/1:11,0:11:21.56:31,0,22	1/1:16,0:15:2.49:6,2,0	0/0:20,0:17:8.02:0,8,33	1/1:19,0:19:7.89:71,8,0	1/1:15,0:15:2.79:19,3,0	1/1:23,0:24:23.38:196,23,0	1/1:18,0:16:0.47:1,0,0	0/1:15,10:25:23.20:77,0,23	0/0:11,0:18:1.85:0,2,20	1/1:9,0:8:3.45:23,3,0	1/1:15,0:13:1.55:4,2,0	0/0:20,0:19:1.19:0,1,7	1/1:12,0:9:6.10:31,6,0	1/1:23,0:23:0.60:2,1,0	0/1:24,0:21:0:0,0,0	0/0:12,0:11:3.01:0,3,32	1/1:20,0:20:2.95:41,3,0	1/1:29,0:27:10.10:42,10,0	0/1:20,0:20:24.19:30,0,24	0/0:23,0:22:7.50:0,7,39
chr10	69381982	.	CTT	C	1688.07	PASS	AB=1.000;AC=30;AF=0.536;AN=56;BaseQRankSum=6.498;DP=565;FS=7.169;HRun=3;HaplotypeScore=109.9076;InbreedingCoeff=0.2704;MQ=48.84;MQ0=31;MQRankSum=2.365;QD=4.24;ReadPosRankSum=-0.150;VQSLOD=-0.5776;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:14:20.98:186,21,0	0/1:6,0:6:11:11,0,82	0/1:16,0:5:37.90:38,0,55	0/1:30,0:6:4.32:63,0,4	1/1:13,0:12:26.96:222,27,0	0/1:24,0:23:1.22:1,0,232	0/1:28,0:27:26.59:27,0,301	0/0:30,0:28:17.48:0,17,453	0/0:12,0:11:14.67:0,15,129	1/1:13,0:11:6.34:78,6,0	1/1:21,0:17:30.28:148,30,0	0/1:20,0:19:71.07:71,0,211	0/1:12,0:12:45.11:45,0,103	0/1:21,0:21:41.46:41,0,213	0/0:20,0:18:13.43:0,13,283	0/1:24,0:24:10.41:10,0,333	0/0:27,0:26:33.33:0,33,314	0/1:14,0:13:23.21:23,0,191	1/1:18,0:16:7:93,7,0	1/1:5,13:17:38.62:190,39,0	1/1:14,1:10:10.53:74,11,0	0/0:16,0:16:1.83:0,2,152	0/0:25,0:23:43.26:0,43,330	0/0:16,0:14:29.21:0,29,223	0/0:20,0:18:34.66:0,35,284	1/1:27,0:25:59.31:286,59,0	1/1:27,1:28:23.55:137,24,0	1/1:27,0:24:9.50:134,10,0
chr10	69381984	.	TTCTCTCTCTC	T	3051.91	PASS	AB=1.000;AC=18;AF=0.321;AN=56;BaseQRankSum=8.783;DP=566;FS=1.486;HRun=0;HaplotypeScore=162.1008;InbreedingCoeff=0.7947;MQ=48.72;MQ0=32;MQRankSum=1.986;QD=15.34;ReadPosRankSum=-0.171;VQSLOD=2.4445;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:20,0:14:11.52:18,0,12	0/0:6,0:6:17.94:0,18,313	0/0:22,0:7:15.41:0,15,172	0/0:32,0:6:6.82:0,7,69	0/1:12,0:11:0.05:0,0,0	0/0:23,0:23:35.69:0,36,757	0/0:28,0:27:63.58:0,64,911	0/0:32,0:30:67.11:0,67,933	0/0:10,0:10:21.06:0,21,564	1/1:11,0:9:5.56:204,6,0	1/1:18,3:17:36.07:494,36,0	0/0:19,0:18:35.33:0,35,596	0/0:12,0:12:27.08:0,27,423	0/0:20,0:21:48.62:0,49,923	0/0:19,0:17:36.12:0,36,629	0/0:23,0:23:45.02:0,45,1169	0/0:28,0:26:5.12:0,5,581	0/0:13,0:12:0.80:0,1,346	1/1:19,0:17:31.53:448,32,0	1/1:17,1:17:45.10:516,45,0	1/1:15,0:10:8.97:80,9,0	0/0:16,0:16:24.16:0,24,382	0/0:25,0:23:41.39:0,41,812	0/0:16,0:14:30.10:0,30,569	0/0:20,0:18:32.59:0,33,701	1/1:30,0:26:66.60:676,67,0	1/1:25,2:27:14.68:299,15,0	1/1:23,3:23:20.30:512,20,0
chr10	69381994	.	C	CTT	4231.80	PASS	AB=0.538;AC=15;AF=0.268;AN=56;BaseQRankSum=-2.230;DP=601;FS=1.961;HRun=1;HaplotypeScore=103.3055;InbreedingCoeff=0.8417;MQ=54.33;MQ0=26;MQRankSum=3.854;QD=25.65;ReadPosRankSum=-0.434;VQSLOD=3.4535;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:14:20.92:0,21,185	0/0:7,0:7:18.03:0,18,227	0/0:38,0:13:31.97:0,32,308	0/0:47,0:14:22.82:0,23,247	0/0:15,0:14:35.94:0,36,293	0/0:22,0:22:29.28:0,29,492	0/0:29,0:28:64.84:0,65,802	0/0:32,0:30:81.12:0,81,1032	0/0:10,0:9:20.80:0,21,259	1/1:4,11:14:4.78:456,5,0	1/1:9,12:17:29.72:483,30,0	0/0:16,0:15:44.89:0,45,541	0/0:16,0:16:43.19:0,43,460	0/0:20,0:20:31.98:0,32,525	0/0:17,0:16:39.12:0,39,573	0/0:28,0:28:59.84:0,60,727	0/0:28,0:27:49.51:0,50,637	0/0:11,0:11:33.08:0,33,459	1/1:3,18:19:37.76:881,38,0	1/1:17,0:16:15.96:698,16,0	1/1:3,6:8:3.01:58,3,0	0/0:16,0:16:25.27:0,25,360	0/0:26,0:25:48.66:0,49,675	0/0:17,0:15:32.61:0,33,439	0/0:22,0:20:38.68:0,39,524	1/1:8,25:29:33.33:1128,33,0	0/1:4,24:28:17.25:135,0,17	1/1:5,15:19:12.09:392,12,0
chr10	69382687	.	G	GCA	4563.41	PASS	AB=0.600;AC=21;AF=0.375;AN=56;BaseQRankSum=7.583;DP=593;FS=0.000;HRun=0;HaplotypeScore=130.1510;InbreedingCoeff=0.8117;MQ=58.01;MQ0=7;MQRankSum=-2.788;QD=20.46;ReadPosRankSum=-0.819;VQSLOD=5.0119;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:31:39.45:0,39,195	0/0:8,0:8:24.04:0,24,277	0/0:18,0:5:5.95:0,6,54	0/0:18,0:5:2.66:0,3,32	0/0:5,0:27:28.02:0,28,139	0/0:24,0:24:63.07:0,63,755	0/0:40,0:41:95.55:0,96,1071	1/1:9,0:24:6.11:147,6,0	0/0:24,0:24:39.07:0,39,458	1/1:11,12:23:48.14:752,48,0	1/1:3,13:16:24.06:389,24,0	0/0:27,0:27:60.17:0,60,721	0/0:16,0:18:42.13:0,42,513	0/0:22,0:22:54.13:0,54,621	0/0:10,0:10:21.02:0,21,239	0/0:15,0:15:41.96:0,42,490	0/0:4,0:22:36.93:0,37,182	0/0:23,0:26:41.73:0,42,595	1/1:4,9:13:27.02:383,27,0	1/1:5,22:28:33.11:535,33,0	0/1:10,20:30:28.19:587,0,28	0/0:14,0:15:33.09:0,33,391	1/1:20,0:20:3.33:9,3,0	1/1:18,0:18:2.49:6,2,0	0/0:22,0:21:48.15:0,48,585	1/1:20,5:25:62.96:829,63,0	1/1:4,18:22:45.15:730,45,0	1/1:0,4:4:12.04:195,12,0
chr10	69382702	.	C	CACACAG	183.46	PASS	AB=0.862;AC=3;AF=0.054;AN=56;BaseQRankSum=3.368;DP=614;FS=0.000;HRun=0;HaplotypeScore=193.1356;InbreedingCoeff=0.1607;MQ=53.99;MQ0=14;MQRankSum=-4.436;QD=2.55;ReadPosRankSum=-6.255;VQSLOD=0.6665;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:44.08:0,44,716	0/0:10,0:10:29.92:0,30,546	0/0:20,0:3:6.02:0,6,81	0/0:25,0:4:3.90:0,4,56	0/0:23,0:23:29.17:0,29,462	0/0:30,0:30:71.70:0,72,1569	0/0:42,0:40:99:0,99,2033	0/1:21,0:21:34.60:246,0,35	0/0:17,0:16:40.02:0,40,893	0/0:25,0:25:46.73:0,47,273	0/0:19,0:19:19.65:0,20,104	0/0:28,0:28:69.01:0,69,1461	0/0:19,0:18:47.95:0,48,1047	0/0:22,0:22:56.94:0,57,1159	0/0:8,0:8:24.06:0,24,505	0/0:17,0:17:45.14:0,45,1011	0/0:26,0:25:46.73:0,47,624	0/0:31,0:31:63.28:0,63,1297	0/0:14,0:13:4.49:0,4,88	0/0:28,0:28:27.49:0,27,136	0/0:31,0:31:33.12:0,33,307	0/0:15,0:15:26.12:0,26,760	0/1:4,13:24:0.03:0,0,1	0/0:1,15:16:0.38:0,0,2	0/0:20,0:19:51.02:0,51,1190	0/1:27,0:27:25.43:25,0,171	0/0:21,0:20:41.69:0,42,180	0/0:4,0:4:10.71:0,11,44
chr10	69382718	.	GAGAA	G	77.73	PASS	AB=1.000;AC=7;AF=0.130;AN=54;BaseQRankSum=-1.422;DP=575;FS=45.676;HRun=0;HaplotypeScore=164.5113;InbreedingCoeff=0.0211;MQ=51.35;MQ0=16;MQRankSum=2.299;QD=0.69;ReadPosRankSum=-4.165;VQSLOD=-0.4359;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:50.86:0,51,381	0/1:8,0:8:70.24:70,0,170	./.	0/0:18,0:2:2.98:0,3,21	0/0:21,0:21:32.86:0,33,248	0/0:32,0:32:28.37:0,28,592	0/0:32,0:30:56.35:0,56,592	0/0:22,0:22:41.35:0,41,331	0/0:17,0:16:41.58:0,42,358	0/0:26,0:26:54.35:0,54,683	0/1:23,0:23:27.99:28,0,244	0/0:19,0:19:24.87:0,25,360	0/0:20,0:19:40.13:0,40,407	0/0:17,0:17:29.48:0,29,319	0/0:10,0:10:27.89:0,28,365	0/1:14,0:14:5.35:5,0,332	0/0:26,0:25:7.63:0,8,379	0/0:30,0:29:44.08:0,44,532	0/0:12,0:11:30.48:0,30,331	0/0:29,0:28:46.18:0,46,350	0/1:34,0:33:15.24:15,0,375	0/1:16,0:16:17.96:18,0,306	0/0:13,5:18:9.92:0,10,28	1/1:17,1:16:1.40:59,1,0	0/0:16,0:15:2.88:0,3,243	0/0:24,0:24:30.31:0,30,723	0/0:25,0:23:42.99:0,43,460	0/0:5,0:5:5.07:0,5,137
chr10	69382722	.	AAG	A	59.76	PASS	AB=0.967;AC=12;AF=0.231;AN=52;BaseQRankSum=-0.446;DP=567;FS=17.652;HRun=0;HaplotypeScore=155.9408;InbreedingCoeff=0.0126;MQ=49.69;MQ0=14;MQRankSum=0.168;QD=0.26;ReadPosRankSum=-0.551;VQSLOD=1.8708;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:3.05:0,3,19	0/1:7,0:7:16.07:36,0,16	./.	./.	0/1:20,0:21:0.11:0,0,0	0/1:32,0:31:23.05:23,0,157	0/1:35,0:33:5.75:6,0,29	0/0:20,0:20:3.01:0,3,33	0/1:18,0:17:0:0,0,0	0/0:25,0:25:28.43:0,28,204	0/0:24,0:24:6.94:0,7,52	0/1:19,0:19:5.65:6,0,41	0/0:17,0:16:8.97:0,9,70	0/1:17,1:18:7.30:22,0,7	0/0:10,0:10:6.02:0,6,89	0/0:13,0:13:6.02:0,6,88	0/0:26,0:25:7.04:0,7,101	0/1:21,9:29:10.99:63,0,11	0/0:13,0:12:4.35:0,4,27	0/0:27,0:26:2.99:0,3,25	0/0:35,0:34:9.01:0,9,69	0/1:15,0:15:7.11:7,0,124	0/1:17,0:17:0.30:0,0,0	0/0:20,0:18:1.07:0,1,3	1/1:15,0:15:2.84:14,3,0	0/0:23,0:23:31.49:0,31,229	0/0:24,0:22:11.59:0,12,92	0/0:6,0:6:6.26:0,6,37
chr10	69382734	.	G	GAGAA	4052.27	PASS	AB=0.957;AC=19;AF=0.352;AN=54;BaseQRankSum=8.241;DP=557;FS=2.408;HRun=0;HaplotypeScore=147.8525;InbreedingCoeff=0.8963;MQ=50.51;MQ0=15;MQRankSum=-3.577;QD=18.94;ReadPosRankSum=-4.211;VQSLOD=2.9570;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:30:21.72:0,22,201	0/0:5,0:5:15.01:0,15,153	./.	0/0:21,0:4:2.30:0,2,9	0/0:18,0:18:13.67:0,14,138	0/0:33,0:32:50.76:0,51,578	0/0:31,0:29:59.45:0,59,502	0/0:17,0:16:45.99:0,46,309	0/0:16,0:16:22.92:0,23,211	1/1:11,13:25:10.07:843,10,0	1/1:22,2:24:19.43:470,19,0	0/0:20,0:20:37.38:0,37,365	0/0:17,0:16:30.02:0,30,274	0/0:20,0:20:36.08:0,36,346	0/0:10,0:10:15.29:0,15,209	0/0:12,0:12:28.48:0,28,303	0/0:26,0:25:42.62:0,43,406	0/0:28,0:27:55.34:0,55,439	1/1:12,0:12:33.18:308,33,0	1/1:26,1:26:40.26:385,40,0	1/1:36,0:35:55.97:692,56,0	0/0:13,0:13:24.93:0,25,301	1/1:16,0:16:12.61:66,13,0	1/1:24,0:22:9.07:149,9,0	0/0:17,0:16:34.12:0,34,307	1/1:7,16:23:19.17:723,19,0	0/1:21,1:20:0.31:301,0,0	1/1:5,0:5:13.59:116,14,0
chr10	69385204	.	A	AGTGTGTGTGTGTGTGT	9947.43	PASS	AB=1.000;AC=28;AF=0.519;AN=54;BaseQRankSum=1.403;DP=635;FS=4.602;HRun=0;HaplotypeScore=246.5074;InbreedingCoeff=0.7324;MQ=54.83;MQ0=10;MQRankSum=-9.119;QD=29.43;ReadPosRankSum=-6.050;VQSLOD=2.5668;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:24:28.14:218,0,28	0/0:8,0:11:24.08:0,24,911	0/0:23,0:14:12.51:0,13,295	0/0:32,0:18:8.99:0,9,212	1/1:21,0:20:3.01:43,3,0	0/0:17,0:22:36.12:0,36,1384	0/0:25,0:26:42.11:0,42,1473	1/1:32,0:31:40.92:1021,41,0	0/0:19,0:19:39.13:0,39,1594	1/1:27,0:27:45.10:2300,45,0	./.	0/0:21,0:22:33.10:0,33,1278	0/0:19,0:21:57.18:0,57,2097	0/0:31,0:32:48.16:0,48,1860	0/0:28,0:31:51.17:0,51,2189	0/0:21,0:23:41.99:0,42,1452	1/1:10,0:9:5.99:136,6,0	1/1:11,0:14:17.55:620,18,0	1/1:14,0:12:19.87:598,20,0	1/1:22,3:24:9.03:681,9,0	1/1:38,0:36:10.07:155,10,0	0/0:23,0:23:54.17:0,54,2054	1/1:16,0:13:2.99:24,3,0	1/1:13,7:20:2.89:223,3,0	0/1:18,0:21:20.19:20,0,776	1/1:25,4:26:33.07:1313,33,0	1/1:25,1:23:27.05:1353,27,0	1/1:6,6:12:18.06:1242,18,0
chr10	69386847	.	C	CTTCATAAA	5440.07	PASS	AB=0.958;AC=9;AF=0.161;AN=56;BaseQRankSum=0.979;DP=612;FS=9.574;HRun=0;HaplotypeScore=204.0726;InbreedingCoeff=0.8058;MQ=76.83;MQ0=0;MQRankSum=-9.586;QD=71.58;ReadPosRankSum=-1.915;VQSLOD=3.1680;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:63.21:0,63,921	0/0:19,0:19:57.18:0,57,1635	0/0:18,0:18:23.60:0,24,1166	0/0:12,0:13:33.37:0,33,764	0/0:33,0:33:45.54:0,46,1268	0/0:31,0:31:93.32:0,93,2797	0/0:16,0:16:48.15:0,48,1386	0/0:30,0:30:90.30:0,90,2618	0/0:23,0:23:69.22:0,69,2021	0/0:30,0:29:0.24:0,0,960	0/0:25,0:25:75.25:0,75,1110	0/0:26,0:26:75.26:0,75,2134	0/0:29,0:29:87.30:0,87,2626	0/0:17,0:17:48.13:0,48,1301	0/0:27,0:27:81.25:0,81,2269	0/0:17,0:17:42.14:0,42,1241	1/1:1,7:8:24.04:989,24,0	1/1:3,4:6:14.94:570,15,0	0/0:23,0:23:69.22:0,69,986	0/0:30,0:30:84.27:0,84,1218	0/0:26,0:26:72.24:0,72,1117	0/1:22,1:23:68.98:69,0,1777	1/1:4,14:19:51.18:2208,51,0	1/1:12,7:19:42.10:1603,42,0	0/0:27,0:27:78.21:0,78,2120	0/0:23,0:23:69.18:0,69,1040	0/0:20,0:20:47.18:0,47,676	0/0:11,0:11:33.11:0,33,469
chr10	69386848	.	A	AT	7126.21	PASS	AB=0.950;AC=23;AF=0.411;AN=56;BaseQRankSum=15.295;DP=613;FS=3.359;HRun=8;HaplotypeScore=111.3824;InbreedingCoeff=0.8981;MQ=76.82;MQ0=0;MQRankSum=-3.053;QD=25.27;ReadPosRankSum=0.727;VQSLOD=4.4381;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,21:23:60.14:678,60,0	0/0:19,0:19:48.02:0,48,439	0/0:17,1:18:18.10:0,18,334	0/0:13,0:13:23.94:0,24,203	1/1:3,30:34:84.25:970,84,0	0/0:31,0:31:84.03:0,84,769	0/0:16,0:16:48.03:0,48,439	0/0:30,0:30:69.02:0,69,632	0/0:23,0:23:66.03:0,66,604	1/1:8,21:28:59.26:719,59,0	1/1:2,24:26:69.20:793,69,0	0/0:26,0:26:60.01:0,60,543	0/0:29,0:29:78.03:0,78,714	0/0:17,0:18:47.05:0,47,413	0/0:27,0:27:66.02:0,66,604	0/0:16,0:16:39:0,39,352	0/0:8,0:8:4.01:0,4,21	0/0:7,0:6:6.03:0,6,26	1/1:2,21:23:63.18:721,63,0	1/1:3,26:29:78.15:870,78,0	1/1:2,24:26:66.20:762,66,0	0/0:24,0:24:62.78:0,63,576	1/1:18,0:18:15.90:77,16,0	0/1:18,0:19:8.18:24,0,8	0/0:26,0:26:69.02:0,69,626	1/1:3,20:23:60.17:682,60,0	1/1:4,17:21:39.12:450,39,0	1/1:0,11:11:33.10:381,33,0
chr10	69386887	.	AGT	A	405.84	PASS	AB=0.927;AC=10;AF=0.179;AN=56;BaseQRankSum=4.571;DP=636;FS=0.000;HRun=0;HaplotypeScore=131.1919;InbreedingCoeff=0.6622;MQ=71.43;MQ0=12;MQRankSum=-3.234;QD=3.90;ReadPosRankSum=0.480;VQSLOD=2.0408;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:45.15:0,45,735	0/0:17,0:17:45.15:0,45,733	0/0:48,1:30:57.66:0,58,893	0/0:44,1:27:12.29:0,12,610	0/0:29,0:28:58.96:0,59,918	0/0:30,2:32:9.88:0,10,1184	0/0:25,1:26:23:0,23,898	0/1:23,2:25:23.22:23,0,686	0/0:22,0:21:48.15:0,48,761	0/0:20,0:20:45.15:0,45,727	0/0:20,0:20:54.18:0,54,883	0/0:18,0:18:48.16:0,48,787	0/0:28,0:28:78.27:0,78,1272	0/0:24,1:25:25.86:0,26,944	0/0:25,0:25:60.19:0,60,958	0/0:23,0:23:57.19:0,57,935	1/1:2,4:5:6.02:74,6,0	1/1:2,6:7:15.05:186,15,0	0/0:23,0:23:60.20:0,60,956	0/0:22,0:21:48.16:0,48,787	0/0:25,0:22:29.49:0,29,479	0/1:24,2:26:39.76:40,0,898	1/1:7,11:20:8.86:89,9,0	1/1:10,9:19:12.04:149,12,0	0/0:28,0:28:66.18:0,66,1009	0/0:15,0:14:21.02:0,21,314	0/0:14,0:14:33.06:0,33,474	0/0:5,0:5:6.02:0,6,98
chr10	69386931	.	G	GAGAGAGAGAGAA	2095.31	PASS	AB=0.994;AC=10;AF=0.179;AN=56;BaseQRankSum=5.737;DP=684;FS=2.345;HRun=0;HaplotypeScore=226.2177;InbreedingCoeff=0.2412;MQ=52.35;MQ0=32;MQRankSum=-5.297;QD=11.20;ReadPosRankSum=1.486;VQSLOD=2.2952;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:27,0:26:37.72:623,38,0	0/0:11,0:10:27.01:0,27,412	0/0:33,0:13:11.98:0,12,107	0/0:58,0:13:10.14:0,10,137	1/1:23,5:28:44.41:531,44,0	0/0:26,0:26:56.99:0,57,1199	0/0:23,0:23:31.15:0,31,912	0/0:25,0:24:52.71:0,53,528	0/0:25,0:24:62.75:0,63,1338	0/1:31,0:31:99:206,0,330	0/0:22,0:22:26.96:0,27,222	0/0:19,0:19:51.06:0,51,1085	0/0:21,0:21:44.91:0,45,688	0/0:25,0:25:57:0,57,1211	0/0:30,0:30:60.76:0,61,1650	0/0:27,0:27:57.03:0,57,1190	0/0:13,0:12:14.48:0,14,103	0/1:13,0:12:0.55:1,0,117	0/1:25,0:24:99:374,0,173	0/0:26,0:23:23.13:0,23,186	0/1:25,0:17:65.72:66,0,99	0/0:29,0:29:56.62:0,57,1018	0/0:27,0:27:6.64:0,7,119	0/0:18,0:17:11.64:0,12,79	0/0:29,0:29:63.01:0,63,928	0/1:13,0:12:99:143,0,125	0/1:23,0:20:99:302,0,165	0/0:10,0:9:0.29:0,0,74
chr10	69388520	.	AAC	A	277.98	PASS	AB=0.914;AC=18;AF=0.333;AN=54;BaseQRankSum=5.271;DP=607;FS=0.727;HRun=0;HaplotypeScore=113.1929;InbreedingCoeff=0.1814;MQ=60.29;MQ0=13;MQRankSum=-1.745;QD=1.05;ReadPosRankSum=1.014;VQSLOD=1.9100;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,1:33:14.97:0,15,124	0/0:10,0:10:12.04:0,12,183	0/0:29,0:19:12.04:0,12,170	0/0:36,0:17:3.01:0,3,38	0/0:22,0:26:8.97:0,9,73	0/0:16,0:16:33.06:0,33,448	0/1:22,3:25:58.80:59,0,548	0/0:29,0:22:26.94:0,27,275	0/1:13,5:18:68.26:68,0,333	0/1:23,0:23:13.44:29,0,13	1/1:17,0:19:2.40:13,2,0	0/1:23,1:22:14.52:15,0,293	0/1:20,2:23:45.60:46,0,371	0/0:22,0:22:21.07:0,21,320	0/1:19,1:20:31.47:31,0,387	0/1:16,1:17:15.73:16,0,210	0/0:13,0:9:2.97:0,3,20	0/0:15,0:13:14.09:0,14,116	0/0:14,0:12:0:0,0,0	1/1:13,0:21:3.31:15,3,0	./.	0/0:24,2:26:14.37:0,14,646	0/1:23,0:22:0.77:1,0,73	0/0:37,0:34:9.64:0,10,74	0/0:20,0:20:27.08:0,27,388	1/1:17,0:21:14.33:76,14,0	1/1:14,0:14:4.97:26,5,0	1/1:5,0:7:8.52:42,9,0
chr10	69388548	.	C	CCAGAG	1483.90	PASS	AB=0.967;AC=8;AF=0.143;AN=56;BaseQRankSum=7.320;DP=718;FS=18.926;HRun=0;HaplotypeScore=198.1609;InbreedingCoeff=0.1275;MQ=46.98;MQ0=27;MQRankSum=-7.842;QD=14.27;ReadPosRankSum=0.441;VQSLOD=1.7730;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:37:20.03:0,20,262	0/0:7,0:7:17.96:0,18,414	0/0:46,0:13:35.97:0,36,557	0/0:56,0:11:19.57:0,20,432	0/0:18,0:18:23.99:0,24,411	0/0:21,0:21:45.15:0,45,1026	0/0:36,0:36:99:0,102,2263	0/0:50,0:44:99:0,120,2538	0/0:24,0:24:50.52:0,51,1104	0/1:21,1:18:99:387,0,299	0/1:14,2:14:99:112,0,125	0/0:32,0:30:75.22:0,75,1555	0/0:26,0:26:68.43:0,68,1427	0/0:25,0:25:75.17:0,75,1457	0/0:18,0:18:48.16:0,48,1057	0/0:13,0:13:39.13:0,39,822	0/0:35,0:28:30.98:0,31,795	0/0:25,0:23:62.09:0,62,886	0/1:15,0:14:99:300,0,116	0/1:21,0:19:88.45:88,0,318	0/0:24,0:13:8.82:0,9,204	0/0:23,0:23:66.23:0,66,1476	0/0:22,0:21:1.95:0,2,301	0/0:55,0:48:11.85:0,12,705	0/0:15,0:15:42.14:0,42,951	0/1:19,1:14:99:362,0,326	1/1:3,1:5:15.05:351,15,0	0/1:4,0:4:6.37:23,0,6
chr10	69388572	.	CAT	C	104.50	PASS	AB=0.977;AC=7;AF=0.125;AN=56;BaseQRankSum=6.762;DP=790;FS=2.116;HRun=0;HaplotypeScore=203.5621;InbreedingCoeff=0.2467;MQ=50.04;MQ0=32;MQRankSum=-4.496;QD=0.96;ReadPosRankSum=-2.663;VQSLOD=2.5644;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:39,2:35:18.75:0,19,424	0/0:6,0:6:15.01:0,15,251	0/1:40,0:10:2.39:2,0,176	0/0:56,0:20:34.76:0,35,425	0/0:18,0:17:30.55:0,31,485	0/1:18,1:19:15.61:16,0,802	0/0:44,0:44:99:0,115,1969	0/0:68,0:62:99:0,165,2615	0/0:34,0:34:39.84:0,40,1215	0/0:26,1:22:8.82:0,9,700	0/0:17,0:15:17.90:0,18,323	0/0:31,0:30:78.18:0,78,1356	0/0:26,0:26:59.13:0,59,1195	0/0:26,0:26:63.76:0,64,1222	0/0:16,0:16:24.93:0,25,572	0/0:18,0:18:42.12:0,42,756	0/0:42,0:37:50.71:0,51,1360	0/0:21,1:20:27.30:0,27,790	0/1:17,0:13:44.35:44,0,119	0/0:22,0:19:17.18:0,17,337	0/0:37,7:25:18.05:0,18,346	0/0:22,0:22:53.61:0,54,897	0/0:24,2:25:20.83:0,21,372	0/0:50,3:46:18.04:0,18,645	0/0:20,0:20:38.21:0,38,987	0/1:23,1:17:99:105,0,371	0/1:3,0:3:3.11:12,0,3	1/1:5,0:4:8.59:49,9,0
chr10	69388574	.	T	TAC	189.81	PASS	AB=0.969;AC=8;AF=0.148;AN=54;BaseQRankSum=7.553;DP=811;FS=4.385;HRun=0;HaplotypeScore=210.3033;InbreedingCoeff=0.0768;MQ=50.71;MQ0=35;MQRankSum=-5.843;QD=0.99;ReadPosRankSum=0.156;VQSLOD=2.2275;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:41,1:36:60.89:61,0,308	0/0:6,0:6:15.05:0,15,189	0/0:42,0:13:10.44:0,10,128	0/0:54,0:20:9.12:0,9,250	0/0:18,0:17:10.12:0,10,307	0/0:20,0:20:51.34:0,51,586	0/0:45,0:45:99:0,107,1305	0/0:68,0:62:99:0,123,1546	0/0:36,0:37:54.06:0,54,817	0/1:27,0:21:7.88:8,0,406	0/0:18,0:15:17.89:0,18,223	0/0:31,0:30:19.57:0,20,777	0/0:26,0:26:63.19:0,63,775	0/0:27,0:27:71.88:0,72,850	0/0:17,0:17:33.10:0,33,401	0/0:18,0:18:39.12:0,39,485	0/0:42,0:37:18.23:0,18,864	0/1:22,2:21:91.99:92,0,412	0/1:17,0:13:56.12:56,0,97	0/0:23,0:20:18.06:0,18,227	0/0:47,1:28:18.03:0,18,227	0/0:24,0:24:51.12:0,51,613	0/0:27,0:26:20.97:0,21,265	0/1:47,5:47:14.26:14,0,368	0/0:21,0:21:51.15:0,51,628	0/1:25,0:17:51.90:52,0,234	1/1:4,0:3:8.24:40,8,0	./.
chr10	69388608	.	TAC	T	1330.46	PASS	AB=0.797;AC=12;AF=0.222;AN=54;BaseQRankSum=7.265;DP=795;FS=0.545;HRun=0;HaplotypeScore=201.9703;InbreedingCoeff=0.0861;MQ=48.74;MQ0=49;MQRankSum=-4.441;QD=4.07;ReadPosRankSum=-0.722;VQSLOD=2.8675;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:40,8:38:99:233,0,389	0/0:9,0:9:23.75:0,24,360	0/0:38,2:8:5.29:0,5,22	0/0:33,0:9:1.22:0,1,3	0/0:15,3:17:26.54:0,27,422	0/0:24,0:23:45.77:0,46,641	0/0:40,1:41:58.46:0,58,1439	0/0:45,1:37:19.33:0,19,842	0/0:36,0:36:81.19:0,81,1308	0/1:17,8:19:99:150,0,310	0/0:8,4:10:15.05:0,15,231	0/0:33,0:33:86.30:0,86,1302	0/0:26,0:26:60.07:0,60,916	0/0:26,0:26:63.18:0,63,993	0/0:20,0:20:54.05:0,54,864	0/0:30,0:30:80.05:0,80,1179	0/1:36,8:40:99:101,0,867	0/1:18,5:20:99:102,0,410	0/1:16,3:12:41.17:54,0,41	0/0:12,4:15:5.14:0,5,98	0/1:39,16:36:37.74:38,0,259	0/0:33,0:31:63.20:0,63,1002	1/1:13,9:21:17.92:225,18,0	0/1:35,27:55:40.76:299,0,41	0/0:23,0:23:60.19:0,60,970	0/1:16,7:18:99:231,0,119	1/1:2,3:3:5.75:50,6,0	./.
chr10	69388622	.	CCACAGAG	C	42.20	PASS	AB=0.950;AC=3;AF=0.056;AN=54;BaseQRankSum=4.612;DP=772;FS=1.280;HRun=0;HaplotypeScore=234.1752;InbreedingCoeff=0.3118;MQ=47.83;MQ0=52;MQRankSum=-3.834;QD=0.72;ReadPosRankSum=-2.656;VQSLOD=2.4180;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:54,4:46:74.06:0,74,1798	0/0:8,0:8:24.08:0,24,984	1/1:40,0:2:1.53:5,2,0	0/0:42,0:5:6.06:0,6,34	0/0:14,0:13:30.10:0,30,997	0/0:23,0:22:23.30:0,23,1925	0/0:51,0:52:94.81:0,95,5453	0/0:34,0:25:75.26:0,75,2486	0/0:34,0:34:81.11:0,81,3120	0/0:24,0:16:48.01:0,48,1345	0/0:12,0:9:18.06:0,18,568	0/0:32,0:32:96.30:0,96,3232	0/0:26,0:26:75.24:0,75,2567	0/0:27,0:27:78.26:0,78,2644	0/0:23,0:23:56.89:0,57,1994	0/0:33,0:33:82.35:0,82,3416	0/0:40,0:36:44.19:0,44,2258	0/1:17,1:16:99:116,0,918	0/0:9,0:4:9.50:0,10,243	0/0:9,0:9:9.76:0,10,284	0/0:61,0:44:46.46:0,46,1401	0/0:31,0:28:78.26:0,78,2792	0/0:15,0:13:17.95:0,18,407	0/0:51,1:48:37.59:0,38,711	0/0:22,0:22:66.23:0,66,2575	0/0:16,0:14:39.13:0,39,1102	0/0:6,0:4:12.04:0,12,404	./.
chr10	69388635	.	CCA	C	1637.79	PASS	AB=0.814;AC=19;AF=0.339;AN=56;BaseQRankSum=4.756;DP=837;FS=9.010;HRun=0;HaplotypeScore=169.1340;InbreedingCoeff=0.3334;MQ=47.12;MQ0=56;MQRankSum=-1.246;QD=5.05;ReadPosRankSum=-3.452;VQSLOD=1.9228;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:48,11:51:99:319,0,303	0/0:8,0:8:18.06:0,18,278	0/0:61,0:1:2.37:0,2,8	0/0:63,0:10:4.14:0,4,101	0/1:8,4:12:87.46:87,0,159	0/0:27,0:26:59.20:0,59,899	0/0:55,1:57:83.22:0,83,1749	0/0:26,0:16:27.09:0,27,423	0/0:36,1:37:36.08:0,36,1022	0/1:17,5:13:31.89:127,0,32	1/1:3,6:6:6.02:72,6,0	0/0:28,0:29:57.17:0,57,888	0/0:31,0:31:72.20:0,72,1042	0/0:29,0:29:60.16:0,60,882	0/0:25,0:25:57.19:0,57,866	0/0:39,0:39:96.32:0,96,1479	0/1:27,0:27:48.21:48,0,51	0/0:18,0:15:1.80:0,2,77	1/1:5,3:3:9.03:108,9,0	1/1:8,3:10:8.98:92,9,0	1/1:40,24:48:45.61:540,46,0	0/0:32,1:31:72.24:0,72,1096	0/1:12,0:14:8.24:8,0,11	0/1:42,0:44:8.13:8,0,25	0/0:28,0:28:69.06:0,69,965	0/1:14,6:17:39.41:226,0,39	1/1:2,5:5:9.03:109,9,0	1/1:1,5:5:6.02:72,6,0
chr10	69388676	.	TAC	T	276.87	PASS	AB=0.870;AC=4;AF=0.074;AN=54;BaseQRankSum=2.182;DP=943;FS=24.317;HRun=0;HaplotypeScore=179.7186;InbreedingCoeff=0.0895;MQ=44.80;MQ0=87;MQRankSum=-3.886;QD=2.05;ReadPosRankSum=-2.495;VQSLOD=0.7781;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:55,0:41:54.91:0,55,846	0/0:9,0:9:18.06:0,18,296	./.	0/1:66,0:5:0:0,0,0	0/0:14,0:13:29.31:0,29,454	0/0:29,0:28:64.89:0,65,982	0/0:60,0:59:99:0,108,1595	0/1:25,3:12:86.57:163,0,87	0/0:26,0:26:59.41:0,59,939	0/0:32,0:24:63.21:0,63,1027	0/0:14,0:13:33.05:0,33,488	0/0:35,0:33:66.20:0,66,1019	0/0:40,0:40:96.76:0,97,1547	0/0:31,0:31:62.69:0,63,1021	0/0:33,0:33:54.07:0,54,820	0/0:30,0:29:63.20:0,63,1004	0/1:14,8:16:88.50:196,0,89	0/1:15,3:17:15.22:15,0,340	0/0:15,0:7:12:0,12,169	0/0:18,0:17:42.14:0,42,685	0/0:100,0:78:99:0,132,2047	0/0:30,1:26:50.94:0,51,727	0/0:32,0:29:60.58:0,61,931	0/0:65,3:57:76.02:0,76,1084	0/0:20,0:20:54.18:0,54,878	0/0:32,1:24:25.55:0,26,877	0/0:12,0:12:32.97:0,33,479	0/0:9,0:9:15.05:0,15,249
chr10	69388712	.	TAC	T	880.31	PASS	AB=0.888;AC=5;AF=0.089;AN=56;BaseQRankSum=2.026;DP=993;FS=16.583;HRun=0;HaplotypeScore=188.6008;InbreedingCoeff=-0.0988;MQ=47.60;MQ0=66;MQRankSum=2.270;QD=3.88;ReadPosRankSum=2.086;VQSLOD=1.9298;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:48,0:34:34.35:34,0,589	0/1:11,0:11:6.01:6,0,379	0/0:50,0:4:11.35:0,11,98	0/0:65,0:7:12.01:0,12,157	0/0:22,0:19:33.37:0,33,486	0/0:27,0:27:53.73:0,54,787	0/0:45,0:44:99:0,102,1603	0/0:36,0:22:54.17:0,54,828	0/0:34,0:33:66.03:0,66,1077	0/0:33,0:30:57.19:0,57,907	0/0:16,0:16:21.07:0,21,318	0/0:35,1:36:46.60:0,47,1179	0/0:39,0:38:90.28:0,90,1403	0/0:40,0:40:50.13:0,50,1193	0/0:30,0:30:51.12:0,51,813	0/0:19,0:19:30.06:0,30,442	0/1:50,1:39:10.66:11,0,1210	0/0:31,1:30:37.53:0,38,756	0/0:11,0:6:9.03:0,9,147	0/0:15,0:14:30.10:0,30,483	0/0:109,0:93:99:0,147,2304	0/0:23,0:21:48.16:0,48,782	0/1:28,12:37:99:339,0,405	0/1:42,33:65:99:602,0,414	0/0:26,0:25:54.16:0,54,823	0/0:42,0:28:54.17:0,54,844	0/0:8,0:8:21.07:0,21,333	0/0:7,0:7:12.04:0,12,198
chr10	69388748	.	T	TAC	6091.30	PASS	AB=0.816;AC=24;AF=0.444;AN=54;BaseQRankSum=-0.419;DP=891;FS=5.978;HRun=0;HaplotypeScore=154.1954;InbreedingCoeff=0.7995;MQ=50.23;MQ0=64;MQRankSum=-4.015;QD=15.74;ReadPosRankSum=1.303;VQSLOD=4.7790;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,16:17:40.38:611,40,0	0/0:15,0:15:39.11:0,39,494	0/0:53,0:10:25.62:0,26,240	0/0:62,0:14:21.05:0,21,227	1/1:6,9:11:18.04:274,18,0	0/0:28,0:25:56.93:0,57,691	0/0:38,0:36:84.27:0,84,1079	0/0:39,0:29:61.41:0,61,764	0/0:46,0:39:78.25:0,78,1003	1/1:13,5:13:21.07:352,21,0	1/1:4,7:10:12.01:174,12,0	0/0:37,0:36:75.13:0,75,944	0/0:36,0:35:69.05:0,69,822	0/0:34,0:33:81.25:0,81,1022	0/0:28,0:27:54.16:0,54,670	0/0:23,0:22:51.11:0,51,611	1/1:7,42:40:89.23:1615,89,0	1/1:6,33:38:57.19:921,57,0	./.	1/1:7,3:10:15.05:236,15,0	1/1:47,33:57:60.15:925,60,0	0/0:27,0:23:54.13:0,54,647	0/1:26,9:32:99:140,0,397	0/1:54,13:57:99:224,0,566	0/0:28,0:26:66.16:0,66,838	1/1:14,9:15:30.09:468,30,0	1/1:1,2:3:6.02:101,6,0	1/1:3,5:7:3.01:51,3,0
chr10	69388780	.	TAC	T	1045.36	PASS	AB=0.749;AC=12;AF=0.231;AN=52;BaseQRankSum=8.369;DP=809;FS=2.183;HRun=0;HaplotypeScore=124.8456;InbreedingCoeff=0.2266;MQ=40.89;MQ0=131;MQRankSum=-6.949;QD=5.53;ReadPosRankSum=-2.011;VQSLOD=2.6573;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:27,3:16:83.36:83,0,89	0/0:14,0:13:21.07:0,21,305	./.	./.	0/0:10,3:8:3.01:0,3,49	0/0:28,0:23:49.96:0,50,754	0/0:41,0:25:36.11:0,36,569	0/0:32,0:17:42.14:0,42,671	0/0:47,0:38:61.70:0,62,845	0/1:14,3:7:99:103,0,121	0/0:10,2:10:6.02:0,6,96	0/0:51,0:47:69.18:0,69,1031	0/0:32,0:26:46.19:0,46,647	0/0:36,0:32:42.13:0,42,670	0/0:31,0:27:42.12:0,42,648	0/0:28,0:25:39.99:0,40,597	1/1:27,6:29:10.13:265,10,0	0/1:20,7:27:92.67:169,0,93	0/0:11,0:3:6.02:0,6,100	0/1:7,6:10:30.22:30,0,43	0/0:66,9:44:14.21:0,14,206	0/0:37,0:27:39.60:0,40,550	1/1:11,13:21:18.05:227,18,0	0/1:19,12:27:17.65:182,0,18	0/0:35,0:25:48.06:0,48,718	0/0:14,4:7:7.58:0,8,104	0/1:1,6:5:37.77:101,0,38	1/1:4,3:6:3.01:38,3,0
chr10	69388807	.	CCACA	C	96.68	PASS	AB=0.862;AC=3;AF=0.063;AN=48;BaseQRankSum=2.503;DP=748;FS=17.184;HRun=0;HaplotypeScore=115.9049;InbreedingCoeff=-0.0723;MQ=34.87;MQ0=175;MQRankSum=-3.120;QD=1.64;ReadPosRankSum=2.575;VQSLOD=1.3614;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:19:24.05:0,24,384	0/0:9,0:8:9.03:0,9,198	./.	./.	./.	0/0:24,0:19:36.12:0,36,857	0/0:38,0:18:27.09:0,27,675	0/0:31,0:11:21.07:0,21,413	0/0:38,0:31:51:0,51,1098	0/0:20,0:9:24.05:0,24,469	0/0:14,0:11:9.03:0,9,188	0/0:50,0:45:75.25:0,75,1728	0/1:28,0:23:14.13:14,0,725	0/0:34,0:27:39.13:0,39,959	0/0:35,0:30:54.18:0,54,1220	0/0:32,0:30:41.93:0,42,887	0/0:8,0:6:5.23:0,5,57	0/1:11,3:14:99:133,0,109	0/0:16,0:4:9.03:0,9,226	0/0:15,0:12:8.98:0,9,225	0/0:62,0:35:14.71:0,15,264	0/0:41,0:31:63.21:0,63,1338	./.	0/1:11,5:14:14.25:45,0,14	0/0:24,0:15:29.98:0,30,550	0/0:26,0:10:29.89:0,30,570	0/0:7,0:5:9.03:0,9,169	0/0:9,0:8:6.02:0,6,150
chr10	69388844	.	CAT	C	72.52	PASS	AB=0.968;AC=9;AF=0.167;AN=54;BaseQRankSum=3.635;DP=770;FS=3.113;HRun=0;HaplotypeScore=134.0916;InbreedingCoeff=-0.0288;MQ=39.37;MQ0=103;MQRankSum=-2.329;QD=0.30;ReadPosRankSum=-5.868;VQSLOD=0.6315;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:31:36.22:0,36,369	0/1:7,1:8:17.10:17,0,123	0/1:56,0:3:11.95:12,0,105	0/0:48,0:5:15.05:0,15,262	./.	0/0:23,0:21:33.49:0,33,640	0/0:40,0:32:81.59:0,82,1326	0/1:39,0:30:68.73:69,0,411	0/0:32,0:30:36.12:0,36,1104	0/0:27,0:13:9.84:0,10,212	0/1:14,2:14:7.04:7,0,71	0/0:45,0:40:57.81:0,58,1242	0/0:26,1:23:5.74:0,6,693	0/0:32,0:29:41.01:0,41,781	0/0:40,0:36:48.32:0,48,1101	0/0:32,0:30:36.27:0,36,691	0/0:6,0:3:2.96:0,3,19	0/0:11,0:11:5.37:0,5,57	0/1:11,0:3:11.11:11,0,57	0/1:25,0:21:65.94:66,0,130	0/1:70,0:46:3.29:3,0,140	0/0:39,0:33:64.11:0,64,986	0/0:8,0:7:1.14:0,1,3	1/1:14,1:11:2.44:10,2,0	0/0:19,0:15:22.59:0,23,480	0/0:32,0:20:38.24:0,38,398	0/0:10,0:6:3.01:0,3,31	0/0:7,0:7:5.96:0,6,50
chr10	69388846	.	T	TACAC	1256.71	PASS	AB=0.885;AC=18;AF=0.333;AN=54;BaseQRankSum=4.834;DP=789;FS=1.249;HRun=0;HaplotypeScore=154.6097;InbreedingCoeff=0.2875;MQ=39.59;MQ0=100;MQRankSum=-4.900;QD=4.08;ReadPosRankSum=-3.396;VQSLOD=1.6491;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:27,13:31:21.94:435,0,22	0/1:8,0:8:6.51:7,0,154	0/0:58,0:3:2.47:0,2,48	0/0:48,0:5:6.01:0,6,61	0/0:8,2:9:0:0,0,0	0/0:21,0:21:32.91:0,33,424	0/0:41,0:35:54.28:0,54,1077	0/1:25,0:34:99:124,0,113	0/0:32,0:30:40.12:0,40,925	1/1:24,0:12:18.02:263,18,0	1/1:16,0:15:11.01:77,11,0	0/0:47,0:42:72.05:0,72,1072	0/0:27,0:23:29.33:0,29,568	0/0:34,0:32:51.08:0,51,743	0/0:43,0:39:32.27:0,32,791	0/0:31,0:30:39.12:0,39,588	./.	0/0:10,0:11:5.93:0,6,36	1/1:13,0:4:3.83:20,4,0	0/1:24,0:21:14.82:139,0,15	0/1:64,0:46:31.50:31,0,87	0/0:37,0:33:60.16:0,60,847	0/0:9,0:8:2.84:0,3,14	1/1:13,0:12:1.42:4,1,0	0/0:19,0:15:29.31:0,29,434	0/1:30,0:21:99:209,0,160	1/1:9,0:6:3.01:55,3,0	1/1:5,0:5:3.01:52,3,0
chr10	69388890	.	CAT	C	496.54	PASS	AB=0.975;AC=14;AF=0.269;AN=52;BaseQRankSum=8.884;DP=858;FS=5.249;HRun=0;HaplotypeScore=150.8412;InbreedingCoeff=-0.1026;MQ=37.94;MQ0=126;MQRankSum=-3.379;QD=1.33;ReadPosRankSum=-1.824;VQSLOD=2.2684;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:36,1:22:14.64:15,0,68	0/0:13,0:12:36.10:0,36,573	./.	./.	0/0:9,0:6:3.01:0,3,57	0/1:27,1:24:34.48:34,0,793	0/0:54,0:36:77.59:0,78,1218	0/0:50,0:35:66.04:0,66,1141	0/0:35,0:32:58.63:0,59,977	0/1:31,0:17:11.68:12,0,323	0/0:22,0:15:6.70:0,7,241	0/1:32,1:29:18.14:18,0,930	0/0:35,0:28:29.12:0,29,631	0/0:47,0:43:35.30:0,35,1248	0/0:49,0:45:65.13:0,65,1293	0/0:32,0:30:31.35:0,31,734	0/1:26,0:18:27.80:113,0,28	0/1:21,0:16:99:153,0,121	0/0:18,0:5:12.01:0,12,165	0/1:21,1:18:31.66:32,0,165	1/1:70,1:48:5.64:104,6,0	0/1:34,0:30:16.83:17,0,722	0/0:11,1:9:2.22:0,2,7	0/1:31,2:27:10.28:10,0,95	0/0:23,0:18:29.19:0,29,737	0/1:31,2:21:99:125,0,372	1/1:4,0:2:2.22:7,2,0	0/0:1,0:1:2.68:0,3,11
chr10	69388892	.	TAC	T	1299.87	PASS	AB=0.769;AC=13;AF=0.271;AN=48;BaseQRankSum=10.461;DP=851;FS=0.554;HRun=0;HaplotypeScore=147.7897;InbreedingCoeff=0.1813;MQ=37.92;MQ0=132;MQRankSum=-6.732;QD=4.25;ReadPosRankSum=0.239;VQSLOD=2.8617;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:31,5:21:20.30:142,20,0	0/0:13,0:12:36.10:0,36,561	./.	./.	0/0:9,1:6:3.01:0,3,50	0/0:27,0:23:33.11:0,33,795	0/0:54,0:35:57.17:0,57,914	0/0:46,0:32:42.61:0,43,688	0/0:37,0:34:51.61:0,52,794	0/1:27,3:17:54.02:54,0,228	0/1:19,2:15:19.79:20,0,229	0/0:36,0:32:33.97:0,34,896	0/0:33,0:26:42.13:0,42,653	0/0:45,0:41:78.11:0,78,1214	0/0:47,0:43:78.22:0,78,1197	0/0:30,0:28:43.18:0,43,658	0/1:11,15:18:18.05:269,0,18	0/1:8,13:16:88.74:400,0,89	0/0:15,1:5:10.85:0,11,146	0/1:13,9:18:99:130,0,128	1/1:45,25:47:17.70:227,18,0	0/0:35,0:31:42.59:0,43,647	1/1:9,3:9:2.68:11,3,0	0/1:19,14:27:43.66:44,0,56	0/0:24,0:19:44.93:0,45,675	0/1:31,4:22:99:158,0,249	./.	./.
chr10	69388903	.	ACACC	A	423.32	PASS	AB=0.983;AC=4;AF=0.083;AN=48;BaseQRankSum=5.428;DP=756;FS=1.028;HRun=0;HaplotypeScore=158.0682;InbreedingCoeff=0.2349;MQ=37.95;MQ0=134;MQRankSum=-4.973;QD=4.70;ReadPosRankSum=-3.221;VQSLOD=2.0060;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:21,8:15:4.44:381,4,0	0/0:15,0:14:42.14:0,42,1073	./.	./.	0/0:8,1:5:2.74:0,3,87	0/0:30,0:25:69.22:0,69,1697	0/0:49,0:30:71.95:0,72,1683	0/0:26,0:18:54.13:0,54,1304	0/0:33,0:30:62.71:0,63,1472	0/0:21,0:10:22.21:0,22,478	0/0:15,2:12:4.19:0,4,448	0/0:35,0:31:75.14:0,75,1762	0/0:33,0:26:43.25:0,43,1143	0/0:40,0:37:81.28:0,81,2144	0/0:42,0:38:84.18:0,84,2111	0/0:30,0:28:50.63:0,51,1207	0/0:24,0:17:31.54:0,32,242	0/0:21,0:16:40.46:0,40,441	0/0:17,0:5:10.45:0,10,264	0/0:19,0:16:23.89:0,24,374	0/0:57,7:39:17.33:0,17,135	0/0:28,0:24:48.12:0,48,1149	0/0:14,0:12:4.24:0,4,27	0/1:33,0:27:33.79:34,0,135	0/0:22,0:17:48.16:0,48,1201	0/1:27,1:16:99:110,0,541	./.	./.
chr10	69388905	.	ACC	A	822.68	PASS	AB=0.905;AC=10;AF=0.208;AN=48;BaseQRankSum=10.394;DP=751;FS=0.000;HRun=2;HaplotypeScore=141.8936;InbreedingCoeff=0.1745;MQ=37.74;MQ0=137;MQRankSum=-7.107;QD=3.53;ReadPosRankSum=2.842;VQSLOD=-0.5161;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:27,1:15:23.65:177,24,0	0/0:16,0:15:39.10:0,39,702	./.	./.	0/0:8,0:4:2.88:0,3,61	0/0:29,1:25:55.08:0,55,1113	0/0:48,0:29:71.78:0,72,1082	0/0:27,0:19:57.07:0,57,910	0/0:31,0:28:62.70:0,63,1021	0/1:18,0:9:18.73:19,0,286	0/0:17,0:12:7.98:0,8,282	0/0:35,0:31:64.85:0,65,1166	0/0:32,0:25:42.92:0,43,739	0/0:40,0:37:78.26:0,78,1458	0/0:40,0:36:81.13:0,81,1478	0/0:32,0:30:50.66:0,51,864	0/1:18,6:17:23.47:196,0,23	0/1:17,4:16:99:306,0,109	0/0:16,0:5:3.66:0,4,157	0/1:18,0:15:37.21:37,0,152	1/1:65,0:40:16.35:105,16,0	0/0:28,0:24:47.14:0,47,779	0/0:14,0:12:3.28:0,3,9	0/1:25,9:28:44.17:44,0,57	0/0:22,0:17:48.15:0,48,866	0/1:25,0:14:84.58:85,0,297	./.	./.
chr10	69388919	.	CCACA	C	53.11	PASS	AB=0.804;AC=5;AF=0.109;AN=46;BaseQRankSum=3.284;DP=767;FS=0.000;HRun=0;HaplotypeScore=161.5243;InbreedingCoeff=0.2427;MQ=37.54;MQ0=151;MQRankSum=-3.339;QD=0.58;ReadPosRankSum=1.751;VQSLOD=2.7917;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:15:6.36:0,6,91	0/0:14,0:13:30.10:0,30,631	./.	./.	./.	0/0:35,0:31:75:0,75,1596	0/0:50,0:30:42.12:0,42,868	0/0:29,0:20:32.82:0,33,682	0/0:33,0:31:51.14:0,51,1192	0/0:18,0:6:15.05:0,15,337	0/0:16,0:12:18.06:0,18,451	0/0:33,0:29:69.24:0,69,1520	0/0:33,0:26:36.12:0,36,863	0/0:40,0:37:63.22:0,63,1474	0/0:41,0:37:75.18:0,75,1444	0/0:31,0:29:44.74:0,45,966	0/1:22,2:17:27.38:27,0,191	0/1:17,4:16:99:111,0,403	0/0:18,0:5:5.61:0,6,149	0/0:14,0:11:15.05:0,15,376	0/0:64,0:40:15.05:0,15,283	0/0:30,0:26:48.16:0,48,1090	0/1:6,7:13:0:0,0,0	1/1:29,5:28:0.72:3,1,0	0/0:25,0:20:42.14:0,42,904	0/0:22,0:12:18.06:0,18,442	./.	./.
chr10	69388924	.	C	CACAT	593.51	PASS	AB=0.920;AC=6;AF=0.125;AN=48;BaseQRankSum=6.854;DP=773;FS=3.124;HRun=0;HaplotypeScore=159.3626;InbreedingCoeff=0.2627;MQ=37.74;MQ0=157;MQRankSum=-6.398;QD=5.16;ReadPosRankSum=-2.101;VQSLOD=2.2499;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:13:23.65:24,0,52	0/0:14,0:13:27.48:0,27,406	./.	./.	0/0:6,0:1:3:0,3,25	0/0:37,0:32:81.03:0,81,1213	0/0:49,0:29:62.80:0,63,740	0/0:28,0:17:47.99:0,48,645	0/0:34,0:31:68.90:0,69,1004	0/0:19,0:5:15.01:0,15,248	0/0:15,0:10:18.06:0,18,341	0/0:39,0:34:84.02:0,84,1188	0/0:34,0:27:46.32:0,46,721	0/0:42,0:39:72.14:0,72,1157	0/0:40,0:36:80.91:0,81,1061	0/0:32,0:30:49.30:0,49,738	0/1:19,3:15:69.66:317,0,70	0/1:18,3:16:99:307,0,142	0/0:17,0:5:15.02:0,15,204	0/0:12,0:9:18.01:0,18,303	0/0:63,0:39:17.60:0,18,194	0/0:34,0:30:60.04:0,60,869	0/1:11,1:12:0.02:0,0,0	1/1:26,7:27:5.61:56,6,0	0/0:27,0:21:48.08:0,48,715	0/0:22,0:11:27.01:0,27,384	./.	./.
chr10	69388958	.	TACACAC	T	286.85	PASS	AB=0.832;AC=6;AF=0.107;AN=56;BaseQRankSum=5.476;DP=658;FS=1.168;HRun=0;HaplotypeScore=141.6997;InbreedingCoeff=0.3308;MQ=41.07;MQ0=98;MQRankSum=-5.587;QD=4.86;ReadPosRankSum=-2.174;VQSLOD=2.2602;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,1:13:13.55:0,14,248	0/0:12,0:12:26.58:0,27,717	0/0:40,0:4:12.04:0,12,299	0/0:46,0:3:6.32:0,6,101	0/0:9,0:7:3.01:0,3,62	0/0:28,0:24:59.78:0,60,1806	0/0:45,0:39:96.33:0,96,2964	0/0:13,0:9:15.02:0,15,176	0/0:31,0:29:18.23:0,18,1728	0/0:20,0:7:7.95:0,8,164	0/0:13,0:9:6.02:0,6,119	0/0:43,0:41:99:0,103,3091	0/0:27,0:23:51.59:0,52,1550	0/0:39,0:38:81.18:0,81,2307	0/0:33,0:31:64.39:0,64,1972	0/0:25,0:24:45.14:0,45,1367	0/1:7,5:8:23.38:186,0,23	1/1:10,0:8:11.77:159,12,0	0/0:16,0:7:12.04:0,12,175	0/0:11,0:9:3.01:0,3,35	0/0:41,0:21:5.95:0,6,56	0/0:28,0:26:60.65:0,61,1720	0/0:11,2:13:15.05:0,15,422	1/1:11,3:12:2.69:34,3,0	0/0:23,0:17:44.96:0,45,1250	0/1:22,1:11:27.26:27,0,160	0/0:10,0:8:20.99:0,21,338	0/0:2,0:1:2.99:0,3,24
chr10	69388998	.	T	TAC	1141.77	PASS	AB=0.731;AC=7;AF=0.125;AN=56;BaseQRankSum=5.591;DP=769;FS=6.383;HRun=0;HaplotypeScore=185.7419;InbreedingCoeff=0.8515;MQ=51.13;MQ0=31;MQRankSum=-4.473;QD=15.22;ReadPosRankSum=-1.768;VQSLOD=2.8866;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:27:62.04:0,62,720	0/0:11,0:10:23.99:0,24,305	0/0:55,0:15:17.92:0,18,295	0/0:56,0:17:19.26:0,19,349	0/0:18,0:18:11.79:0,12,153	0/0:23,0:23:54.10:0,54,665	0/0:37,0:36:87.26:0,87,1090	0/0:42,0:37:99:0,105,1293	0/0:26,0:26:52.96:0,53,631	0/0:29,0:22:32.68:0,33,680	0/0:16,0:13:14.90:0,15,177	0/0:45,0:44:99:0,117,1450	0/0:20,0:20:37.27:0,37,628	0/0:37,0:36:87.25:0,87,1068	0/0:40,0:40:95.89:0,96,1181	0/0:25,0:25:59.22:0,59,725	1/1:14,5:18:33.10:456,33,0	1/1:19,5:24:18.44:786,18,0	0/0:19,0:14:17.12:0,17,383	0/0:16,0:15:24.08:0,24,302	0/0:54,0:39:55.05:0,55,683	0/0:32,0:32:78.25:0,78,985	0/1:12,7:18:0:0,0,0	1/1:4,9:13:3:29,3,0	0/0:16,0:16:39.12:0,39,484	0/0:26,0:16:39.12:0,39,492	0/0:12,0:12:30.10:0,30,381	0/0:9,0:7:12.04:0,12,148
chr10	69389015	.	GAC	G	3969.52	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=15.087;DP=782;FS=5.089;HRun=0;HaplotypeScore=178.8468;InbreedingCoeff=0.9612;MQ=55.11;MQ0=15;MQRankSum=-6.120;QD=12.29;ReadPosRankSum=0.158;VQSLOD=3.2707;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:28,1:28:50.75:407,51,0	0/0:10,0:10:24.55:0,25,397	0/0:55,0:19:34.19:0,34,486	0/0:54,0:24:50.82:0,51,654	1/1:21,0:21:35.67:324,36,0	0/0:23,0:23:56.96:0,57,850	0/0:40,0:39:96.11:0,96,1402	0/0:46,0:46:99:0,123,1807	0/0:25,0:25:68.98:0,69,1071	1/1:32,0:27:3:218,3,0	1/1:15,1:14:17.11:98,17,0	0/0:39,0:39:99:0,108,1736	0/0:21,0:21:60.93:0,61,933	0/0:32,0:32:92.50:0,92,1308	0/0:39,0:39:99:0,111,1794	0/0:27,0:27:71.46:0,71,1198	1/1:20,8:23:57.04:666,57,0	1/1:21,7:27:56.15:759,56,0	1/1:20,0:11:13.49:68,13,0	1/1:16,0:16:20.45:117,20,0	1/1:51,0:43:71.19:409,71,0	0/0:31,0:31:92.99:0,93,1335	1/1:14,1:14:24.02:259,24,0	1/1:15,0:14:11.27:97,11,0	0/0:17,0:17:51.09:0,51,784	1/1:32,0:23:57.37:338,57,0	1/1:12,0:12:24.48:141,24,0	1/1:8,0:7:12.17:68,12,0
chr10	69389021	.	CA	C	3621.33	PASS	AB=0.939;AC=26;AF=0.464;AN=56;BaseQRankSum=15.762;DP=790;FS=3.206;HRun=1;HaplotypeScore=169.0289;InbreedingCoeff=0.8397;MQ=55.41;MQ0=12;MQRankSum=-5.015;QD=11.21;ReadPosRankSum=0.982;VQSLOD=2.1258;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,23:27:64.86:646,65,0	0/0:10,0:10:27.03:0,27,375	0/0:56,0:21:53.55:0,54,643	0/0:55,0:27:38.30:0,38,714	1/1:7,14:21:35.69:387,36,0	0/0:21,0:21:57.12:0,57,833	0/0:39,0:38:99:0,102,1435	0/0:44,0:44:99:0,132,1715	0/0:26,0:26:72.24:0,72,1110	1/1:24,3:24:13.94:345,14,0	1/1:12,3:13:19.92:128,20,0	0/0:39,0:38:99:0,114,1668	0/0:26,0:26:69.14:0,69,981	0/0:33,0:33:96.06:0,96,1310	0/0:39,0:39:99:0,117,1654	0/0:26,0:26:72.22:0,72,1094	0/1:25,4:24:41.72:101,0,42	0/1:30,0:28:37.75:38,0,56	1/1:19,1:13:26.51:204,27,0	1/1:17,1:18:23.71:156,24,0	1/1:42,9:44:83.16:621,83,0	0/0:32,0:32:96.12:0,96,1310	1/1:5,10:14:15.09:141,15,0	1/1:6,12:17:8.64:52,9,0	0/0:20,0:20:59.65:0,60,820	1/1:27,4:24:64.87:437,65,0	1/1:10,2:12:29.81:248,30,0	1/1:8,0:7:16.68:119,17,0
chr10	69389024	.	CCCA	C	4417.01	PASS	AB=0.971;AC=25;AF=0.446;AN=56;BaseQRankSum=13.542;DP=788;FS=7.981;HRun=0;HaplotypeScore=190.5934;InbreedingCoeff=0.7891;MQ=55.66;MQ0=11;MQRankSum=-3.488;QD=12.37;ReadPosRankSum=1.314;VQSLOD=3.9726;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:32,0:31:49.97:714,50,0	0/0:9,0:9:23.11:0,23,438	0/0:52,0:19:35.33:0,35,531	0/1:55,0:29:1.68:2,0,682	1/1:21,0:21:35.87:540,36,0	0/0:22,0:22:57.13:0,57,1097	0/0:32,0:31:84.28:0,84,1628	0/0:39,0:39:99:0,109,1359	0/0:28,0:28:81.27:0,81,1685	1/1:27,0:24:3.81:454,4,0	1/1:18,0:16:19.58:185,20,0	0/0:39,0:38:99:0,108,2123	0/0:26,0:26:74.25:0,74,1370	0/0:32,0:32:85.35:0,85,1685	0/0:43,0:43:99:0,112,2323	0/0:27,0:27:77.29:0,77,1683	0/1:28,3:26:3.75:4,0,552	0/0:32,0:30:78.22:0,78,1023	1/1:19,0:12:5.43:167,5,0	0/1:18,0:18:46.57:202,0,47	1/1:50,0:43:77.81:865,78,0	0/0:30,0:30:82.04:0,82,1392	1/1:5,9:14:20.94:204,21,0	1/1:7,11:18:15.75:118,16,0	0/0:20,0:20:56.65:0,57,1111	1/1:31,0:24:35.85:575,36,0	1/1:13,0:13:26.71:247,27,0	1/1:8,0:7:17.77:140,18,0
chr10	69389025	.	CCA	C	2881.91	PASS	AB=0.988;AC=32;AF=0.571;AN=56;BaseQRankSum=12.484;DP=789;FS=4.245;HRun=0;HaplotypeScore=183.8630;InbreedingCoeff=0.4208;MQ=55.69;MQ0=11;MQRankSum=-3.011;QD=5.71;ReadPosRankSum=-3.476;VQSLOD=2.1319;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:19,13:32:51.89:419,52,0	0/1:9,0:9:18.10:18,0,223	0/1:49,0:18:62.74:63,0,111	0/0:52,0:28:14.01:0,14,188	1/1:11,10:21:35.68:325,36,0	0/1:20,1:22:52.19:52,0,581	0/0:32,0:31:51.17:0,51,796	0/1:38,0:38:36.39:36,0,424	0/0:28,0:28:66.22:0,66,1038	1/1:28,0:25:47.20:267,47,0	1/1:18,0:16:17.44:98,17,0	0/0:41,0:40:47.07:0,47,1179	0/0:25,1:26:17.98:0,18,725	0/1:30,1:31:6.13:6,0,882	0/0:42,1:43:26.87:0,27,1317	0/0:25,2:27:36.08:0,36,1060	0/1:31,0:26:85.27:85,0,145	0/0:33,0:31:62.61:0,63,401	1/1:18,0:11:14.42:72,14,0	1/1:19,0:19:20.45:118,20,0	1/1:50,0:43:81.30:466,81,0	0/1:30,0:30:23.92:24,0,613	1/1:12,3:14:26.85:275,27,0	1/1:18,2:19:20.36:184,20,0	0/1:20,0:20:23.48:23,0,590	1/1:32,0:25:62.19:371,62,0	1/1:12,0:12:20.31:118,20,0	1/1:8,0:7:12.86:67,13,0
chr10	69389026	.	CACA	C	6567.98	PASS	AB=0.972;AC=22;AF=0.393;AN=56;BaseQRankSum=11.464;DP=790;FS=2.380;HRun=0;HaplotypeScore=183.6156;InbreedingCoeff=0.8407;MQ=55.67;MQ0=11;MQRankSum=-5.467;QD=23.88;ReadPosRankSum=-0.121;VQSLOD=4.7346;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:32,0:33:14.66:325,0,15	0/0:9,0:9:23.75:0,24,443	0/0:51,0:18:33.42:0,33,534	0/0:52,0:28:47.58:0,48,835	1/1:18,0:21:33.20:287,33,0	0/0:22,0:22:59.43:0,59,1140	0/0:32,0:31:84.26:0,84,1624	0/0:37,0:39:21.86:0,22,924	0/0:28,0:28:81.25:0,81,1732	1/1:12,17:28:30.45:1091,30,0	1/1:4,11:14:20.93:354,21,0	0/0:40,0:39:99:0,111,2211	0/0:28,0:28:80.92:0,81,1500	0/0:32,0:32:89.60:0,90,1724	0/0:43,0:43:99:0,114,2398	0/0:27,0:27:77.93:0,78,1747	0/0:30,0:26:36.98:0,37,879	0/0:33,0:31:78.27:0,78,1463	1/1:10,4:10:30.05:412,30,0	1/1:1,18:19:21.07:390,21,0	1/1:20,27:44:99:1723,104,0	0/0:27,0:27:71.55:0,72,1301	1/1:15,0:14:7.46:79,7,0	0/1:20,0:19:14.05:23,0,14	0/0:19,0:19:56.53:0,57,1146	1/1:9,18:24:67.78:1188,68,0	1/1:2,9:12:26.88:417,27,0	1/1:2,4:7:18.06:279,18,0
chr10	69389671	.	G	GTT	2240.10	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=7.822;DP=582;FS=0.915;HRun=7;HaplotypeScore=96.6862;InbreedingCoeff=0.8977;MQ=66.18;MQ0=0;MQRankSum=-1.044;QD=23.09;ReadPosRankSum=1.896;VQSLOD=2.4075;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:57.15:0,57,664	0/0:6,0:6:12.03:0,12,140	0/0:9,0:7:0.31:0,0,69	0/0:5,0:5:5.68:0,6,39	0/0:39,0:39:99:0,108,1237	0/0:22,0:22:66.18:0,66,756	0/0:16,0:16:42.12:0,42,489	0/0:39,0:39:93.22:0,93,1064	0/0:16,0:16:42.12:0,42,489	0/0:25,0:25:75.21:0,75,864	0/0:22,0:22:66.15:0,66,743	0/0:19,0:19:54.16:0,54,628	0/0:19,0:19:45.10:0,45,501	0/0:14,0:14:39.11:0,39,454	0/0:22,0:22:63.15:0,63,712	0/0:18,0:18:48.14:0,48,559	1/1:2,28:30:66.23:1083,66,0	1/1:1,20:21:60.20:973,60,0	0/0:13,0:13:39.10:0,39,442	0/0:24,0:24:60.17:0,60,699	0/0:12,0:12:36.11:0,36,419	0/0:21,0:21:54.15:0,54,628	1/1:0,0:28:67.85:238,68,0	1/1:4,0:18:29.94:105,30,0	0/0:22,0:22:54.11:0,54,598	0/0:29,0:29:78.21:0,78,897	0/0:33,0:33:90.25:0,90,1048	0/0:19,0:19:51.12:0,51,580
chr10	69389719	.	TCCC	T	285	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.421;DP=574;FS=2.699;HRun=4;HaplotypeScore=115.7479;InbreedingCoeff=0.9833;MQ=78.91;MQ0=0;MQRankSum=-5.291;QD=25.91;ReadPosRankSum=2.198;VQSLOD=0.6926;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:57.20:0,57,1349	0/0:6,0:6:15.05:0,15,355	0/0:18,0:18:54.05:0,54,1187	0/0:13,0:13:35.70:0,36,763	0/0:30,0:30:84.29:0,84,1986	0/0:25,0:25:72.25:0,72,1683	0/0:22,0:22:63.22:0,63,1467	0/0:23,0:23:69.23:0,69,1554	0/0:16,0:16:45.15:0,45,1044	0/0:19,0:19:57.20:0,57,1325	0/0:26,0:26:78.27:0,78,1819	0/0:25,0:25:75.26:0,75,1772	0/0:17,0:17:51.18:0,51,1206	0/0:17,0:17:51.18:0,51,1205	0/0:28,0:28:81.28:0,81,1917	0/0:24,0:24:69.23:0,69,1588	0/0:25,0:25:69.24:0,69,1629	1/1:1,10:11:30.10:379,30,0	0/0:18,0:18:48.15:0,48,1095	0/0:21,0:21:63.22:0,63,1473	0/0:12,0:12:33.11:0,33,727	0/0:24,0:24:69.24:0,69,1611	0/0:22,0:22:60.20:0,60,1378	0/0:14,0:14:33.11:0,33,776	0/0:17,0:17:51.18:0,51,1187	0/0:30,0:30:90.31:0,90,2113	0/0:32,0:31:93.32:0,93,2181	0/0:19,0:19:57.20:0,57,1319
chr10	69389724	.	TG	T	144.96	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.528;DP=568;FS=4.393;HRun=1;HaplotypeScore=91.4583;InbreedingCoeff=0.9818;MQ=81.77;MQ0=0;MQRankSum=-4.663;QD=14.50;ReadPosRankSum=1.556;VQSLOD=3.3435;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:57.18:0,57,888	0/0:6,0:6:15.05:0,15,240	0/0:21,0:21:60.15:0,60,896	0/0:15,0:14:27.12:0,27,503	0/0:31,0:31:87.28:0,87,1368	0/0:23,0:23:69.22:0,69,1080	0/0:23,0:23:69.22:0,69,1070	0/0:24,0:24:72.23:0,72,1105	0/0:14,0:14:42.14:0,42,671	0/0:20,0:20:60.18:0,60,915	0/0:25,0:25:75.26:0,75,1199	0/0:25,0:25:75.24:0,75,1172	0/0:18,0:18:54.18:0,54,861	0/0:18,0:18:54.15:0,54,811	0/0:29,0:29:87.28:0,87,1366	0/0:22,0:22:66.23:0,66,1055	0/0:25,0:25:69.24:0,69,1101	1/1:0,10:10:29.92:239,30,0	0/0:17,0:17:42.14:0,42,672	0/0:22,0:22:66.23:0,66,1053	0/0:10,0:10:27.09:0,27,430	0/0:23,0:23:69.24:0,69,1101	0/0:19,0:19:57.19:0,57,908	0/0:15,0:15:36.07:0,36,525	0/0:16,0:16:48.16:0,48,768	0/0:30,0:30:87.29:0,87,1371	0/0:30,0:29:90.31:0,90,1438	0/0:18,0:18:51.17:0,51,815
chr10	69389955	.	ATCTG	A	2183.80	PASS	AB=0.871;AC=27;AF=0.482;AN=56;BaseQRankSum=9.425;DP=665;FS=0.000;HRun=0;HaplotypeScore=130.6000;InbreedingCoeff=0.7347;MQ=73.32;MQ0=4;MQRankSum=2.751;QD=6.19;ReadPosRankSum=-1.090;VQSLOD=2.3001;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:29:5.93:46,6,0	0/0:9,0:9:21.01:0,21,294	0/0:32,0:28:33.37:0,33,404	0/0:20,0:16:21.05:0,21,238	1/1:31,0:31:9:80,9,0	0/0:31,0:31:18.72:0,19,589	0/0:18,0:17:29.91:0,30,243	0/0:30,0:30:50.86:0,51,421	0/0:23,0:23:60:0,60,835	1/1:9,21:30:65.86:622,66,0	1/1:4,14:18:2.74:188,3,0	0/1:30,0:29:18.96:19,0,295	0/0:24,0:24:63.07:0,63,1047	0/0:28,0:28:74.90:0,75,777	0/0:30,0:29:59.99:0,60,699	0/0:29,0:29:59.93:0,60,651	1/1:20,0:20:36.13:260,36,0	1/1:17,0:17:6:53,6,0	1/1:17,0:17:38.87:319,39,0	1/1:6,16:21:5.95:68,6,0	0/1:11,19:30:0:0,0,0	0/0:17,0:17:13.96:0,14,268	1/1:25,0:24:2.91:24,3,0	0/1:20,0:20:0:0,0,0	0/0:21,0:20:38.99:0,39,390	1/1:6,21:26:56.88:578,57,0	1/1:6,19:25:2.82:50,3,0	1/1:1,11:12:6:73,6,0
chr10	69389965	.	CTGTCTGTCT	C	1428.54	PASS	AB=1.000;AC=7;AF=0.125;AN=56;BaseQRankSum=5.569;DP=652;FS=1.744;HRun=0;HaplotypeScore=175.9645;InbreedingCoeff=0.4663;MQ=64.35;MQ0=7;MQRankSum=-5.018;QD=11.07;ReadPosRankSum=0.962;VQSLOD=2.8545;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:32,0:31:8.08:38,0,8	0/0:7,0:7:21.07:0,21,838	0/0:25,0:21:56.60:0,57,1828	0/0:14,0:10:30.10:0,30,959	0/1:32,0:31:35.91:115,0,36	0/0:29,0:29:81.28:0,81,2699	0/0:21,0:20:33.10:0,33,1083	0/0:32,0:32:94.87:0,95,2500	0/0:26,0:26:78.27:0,78,2880	0/0:29,0:28:84.26:0,84,1382	0/0:23,0:23:33.10:0,33,598	0/0:28,0:27:54.19:0,54,1643	0/0:24,0:24:72.25:0,72,2872	0/0:29,0:29:87.30:0,87,2913	0/0:24,0:23:69.24:0,69,2468	0/0:26,0:26:78.27:0,78,2556	1/1:4,0:22:40.01:1184,40,0	1/1:0,18:18:6.02:192,6,0	0/0:19,0:19:57.19:0,57,1032	0/0:20,0:19:15.03:0,15,218	0/0:29,0:29:26.84:0,27,449	0/0:17,0:17:48.16:0,48,1428	0/1:25,0:24:33.57:34,0,42	0/0:20,0:20:0:0,0,0	0/0:21,0:21:42.14:0,42,1449	0/0:27,0:26:75.26:0,75,1393	0/0:21,0:21:8.63:0,9,171	0/0:12,0:12:6.02:0,6,98
chr10	69389967	.	GTCTGTCTGTCTATCTA	G	1089.41	PASS	AB=0.978;AC=8;AF=0.143;AN=56;BaseQRankSum=6.639;DP=656;FS=1.801;HRun=0;HaplotypeScore=241.5884;InbreedingCoeff=0.5407;MQ=62.70;MQ0=8;MQRankSum=-4.347;QD=8.32;ReadPosRankSum=1.356;VQSLOD=2.4635;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,28:31:6.02:174,6,0	0/0:8,0:8:24.08:0,24,992	0/0:23,0:20:41.23:0,41,905	0/0:13,0:9:24.03:0,24,487	1/1:3,31:33:9.03:413,9,0	0/0:27,0:27:75.24:0,75,2800	0/0:22,0:21:37.01:0,37,1019	0/0:33,0:32:75.84:0,76,1051	0/0:26,0:26:78.22:0,78,3117	0/0:30,0:29:35.82:0,36,1059	0/0:22,0:22:27.07:0,27,963	0/0:28,0:27:54.17:0,54,1294	0/0:24,0:24:69.24:0,69,3614	0/0:29,0:29:84.27:0,84,2520	0/0:27,0:26:75.26:0,75,2557	0/0:28,0:28:75.26:0,75,2786	0/1:21,0:22:26.20:490,0,26	0/1:18,0:18:3.52:4,0,37	0/0:18,0:18:20.84:0,21,461	0/0:19,0:18:6.49:0,6,229	0/0:28,0:28:11.93:0,12,375	0/0:17,0:17:42.14:0,42,1046	1/1:2,23:24:2.92:135,3,0	0/0:0,20:20:0:0,0,0	0/0:22,0:22:39.13:0,39,1311	0/0:27,0:26:43.21:0,43,1559	0/0:21,0:21:8.55:0,9,396	0/0:12,0:12:3.01:0,3,135
chr10	69389975	.	GTCTA	G	570.28	PASS	AB=0.989;AC=20;AF=0.385;AN=52;BaseQRankSum=7.077;DP=655;FS=4.860;HRun=0;HaplotypeScore=132.8699;InbreedingCoeff=0.1320;MQ=60.64;MQ0=11;MQRankSum=-0.744;QD=1.56;ReadPosRankSum=3.885;VQSLOD=1.7827;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:31,0:30:3:28,3,0	0/0:8,0:8:12.01:0,12,187	./.	./.	1/1:33,0:32:8.99:77,9,0	0/1:22,3:25:61.11:61,0,394	0/0:25,0:24:14.96:0,15,123	0/0:38,0:35:2.49:0,2,6	0/0:24,0:24:33.07:0,33,610	0/1:28,0:27:68.75:69,0,88	0/1:24,0:24:70.95:71,0,105	1/1:16,15:30:9.03:137,9,0	0/0:24,0:24:45.05:0,45,794	0/0:28,0:28:21.04:0,21,376	0/0:27,0:26:33.02:0,33,410	0/0:26,0:26:30.03:0,30,400	1/1:22,0:22:14.74:113,15,0	0/1:20,0:19:8.31:8,0,13	0/0:18,0:18:3.11:0,3,9	0/1:20,0:19:12.93:13,0,61	0/1:24,0:24:10.02:10,0,79	0/0:17,0:17:9:0,9,99	1/1:24,0:23:2.90:23,3,0	0/1:20,0:20:0:0,0,0	0/0:15,0:25:12:0,12,128	0/1:26,0:25:86:92,0,86	0/1:24,0:24:7.91:8,0,106	0/1:13,0:13:17.99:21,0,18
chr10	69390771	.	TA	T	5044.60	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=18.543;DP=656;FS=12.015;HRun=8;HaplotypeScore=98.0281;InbreedingCoeff=0.9975;MQ=82.04;MQ0=0;MQRankSum=-2.623;QD=14.62;ReadPosRankSum=1.913;VQSLOD=3.6607;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:35,0:35:86.71:463,87,0	0/0:15,0:15:45.10:0,45,528	0/0:19,1:20:19.12:0,19,467	0/0:15,0:15:36.11:0,36,425	1/1:29,0:29:69.33:369,69,0	0/0:25,0:25:69.21:0,69,834	0/0:21,0:21:51.13:0,51,594	0/0:29,0:29:75.22:0,75,896	0/0:23,0:23:63.18:0,63,740	1/1:35,0:35:69.86:394,70,0	1/1:20,0:20:51.47:259,51,0	0/0:15,0:15:42.12:0,42,497	0/0:18,0:18:48.15:0,48,580	0/0:34,0:34:84.26:0,84,1015	0/0:20,0:20:51.16:0,51,616	0/0:23,0:23:66.19:0,66,787	1/1:2,24:26:63.10:608,63,0	1/1:0,18:18:51.08:492,51,0	1/1:19,0:18:39:202,39,0	1/1:28,0:28:36.36:328,36,0	1/1:18,0:18:17.59:183,18,0	0/0:24,0:24:63.19:0,63,761	1/1:3,24:27:23.59:514,24,0	1/1:0,17:17:45.07:435,45,0	0/0:29,0:29:75.23:0,75,906	1/1:30,0:30:63.01:322,63,0	1/1:26,0:26:42.60:304,43,0	1/1:17,0:17:31.83:172,32,0
chr10	69390779	.	AT	A	9678.26	PASS	AB=1.000;AC=25;AF=0.446;AN=56;BaseQRankSum=16.567;DP=653;FS=7.644;HRun=1;HaplotypeScore=82.4550;InbreedingCoeff=0.7967;MQ=81.14;MQ0=0;MQRankSum=-1.316;QD=28.13;ReadPosRankSum=2.727;VQSLOD=4.1952;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,33:33:90.30:1253,90,0	0/0:18,0:18:54.07:0,54,689	0/0:20,0:20:37.78:0,38,619	0/0:14,0:14:39.12:0,39,542	1/1:0,26:26:78.18:1043,78,0	0/0:26,0:26:78.21:0,78,1058	0/0:22,0:22:60.12:0,60,763	0/0:27,0:27:81.25:0,81,1125	0/0:24,0:24:72.19:0,72,971	1/1:0,37:37:99:1424,108,0	1/1:0,18:18:54.18:753,54,0	0/0:14,0:14:42.13:0,42,582	0/0:18,0:18:54.15:0,54,733	0/0:30,0:30:90.28:0,90,1249	0/0:17,0:17:51.17:0,51,729	0/0:23,0:23:69.20:0,69,949	0/1:27,0:26:23.43:50,0,23	1/1:19,0:19:29.24:81,29,0	1/1:0,24:24:72.11:836,72,0	1/1:4,24:28:76.27:1075,76,0	1/1:1,14:15:45.14:612,45,0	0/0:26,0:26:78.19:0,78,1023	0/1:25,0:25:9.05:47,0,9	0/1:19,0:19:11.31:40,0,11	0/0:30,0:30:87.23:0,87,1164	1/1:1,28:29:87.07:1084,87,0	1/1:0,29:29:66.22:920,66,0	1/1:0,15:15:33.11:459,33,0
chr10	69391536	.	TATTTGGAA	T	2250.54	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.103;DP=770;FS=7.072;HRun=0;HaplotypeScore=194.3337;InbreedingCoeff=0.9903;MQ=82.37;MQ0=0;MQRankSum=-7.652;QD=33.59;ReadPosRankSum=-0.826;VQSLOD=2.7222;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:8,38:46:63.22:1715,63,0	0/0:15,0:15:42.14:0,42,1772	0/0:18,0:18:24.79:0,25,1494	0/0:25,0:25:69.19:0,69,2476	1/1:6,15:21:26.88:657,27,0	0/0:21,0:20:63.20:0,63,2583	0/0:30,0:30:90.28:0,90,3613	0/0:36,0:36:99:0,108,4807	0/0:29,0:29:81.28:0,81,3574	0/0:23,0:23:69.24:0,69,3023	0/0:22,0:22:66.23:0,66,2831	0/0:43,0:43:99:0,126,5409	0/0:28,0:28:81.28:0,81,3587	0/0:33,0:33:96.32:0,96,4148	0/0:40,0:40:99:0,117,5057	0/0:39,0:39:99:0,111,4639	0/0:34,0:34:99:0,99,4064	0/0:11,0:11:33.11:0,33,1451	0/0:21,0:21:57.20:0,57,2364	0/0:21,0:21:63.22:0,63,2709	0/0:54,0:54:99:0,163,7011	0/0:31,0:31:90.31:0,90,3736	0/0:17,0:17:51.18:0,51,2245	0/0:26,0:26:75.26:0,75,3355	0/0:17,0:17:51.18:0,51,2119	0/0:33,0:33:96.33:0,96,4192	0/0:31,0:31:93.32:0,93,4116	0/0:5,0:5:15.05:0,15,671
chr10	69392805	.	GA	G	3603.07	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=9.967;DP=515;FS=0.000;HRun=9;HaplotypeScore=139.5694;InbreedingCoeff=0.9602;MQ=76.47;MQ0=0;MQRankSum=-2.225;QD=21.07;ReadPosRankSum=3.139;VQSLOD=2.1920;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,19:22:51.02:464,51,0	0/0:7,0:7:12.04:0,12,138	0/0:17,0:17:23.07:0,23,217	0/0:18,0:17:39.10:0,39,438	1/1:2,19:21:45:409,45,0	0/0:18,0:18:50.95:0,51,543	0/0:18,0:18:42.12:0,42,485	0/0:26,0:26:54.09:0,54,573	0/0:24,0:24:63.13:0,63,684	1/1:0,24:24:72.02:649,72,0	1/1:1,11:12:30.01:271,30,0	0/0:29,0:29:75.22:0,75,865	0/0:15,0:15:39.11:0,39,448	0/0:21,0:21:57.16:0,57,649	0/0:19,1:20:26.94:0,27,542	0/0:13,0:13:39.11:0,39,446	0/0:20,0:20:50.32:0,50,261	0/0:17,0:17:40.10:0,40,207	1/1:3,12:14:29.95:258,30,0	1/1:1,14:15:32.99:296,33,0	1/1:3,13:16:30:273,30,0	0/0:22,0:22:54.15:0,54,614	0/0:13,0:13:1.03:0,1,95	0/0:22,0:22:51.20:0,51,258	0/0:23,0:24:65.91:0,66,711	1/1:4,17:21:25.54:412,26,0	1/1:2,15:17:39:353,39,0	1/1:0,8:8:24.01:218,24,0
chr10	69393713	.	AACAC	A	1851.05	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=-0.538;DP=548;FS=4.528;HRun=0;HaplotypeScore=111.5756;InbreedingCoeff=0.7335;MQ=58.67;MQ0=11;MQRankSum=3.820;QD=9.85;ReadPosRankSum=1.641;VQSLOD=2.6538;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:29:24.08:0,24,458	1/1:2,3:6:12.03:168,12,0	0/0:25,0:11:0:0,0,0	0/0:22,0:14:0.47:0,0,1	0/0:19,0:27:1.83:0,2,50	1/1:13,11:28:20.61:399,21,0	1/1:17,10:29:18.05:243,18,0	0/0:31,0:27:27.08:0,27,492	1/1:16,9:25:5.81:93,6,0	0/0:22,0:21:39.13:0,39,760	0/0:17,0:17:2.83:0,3,64	1/1:9,6:15:5.86:93,6,0	1/1:10,4:14:6.02:94,6,0	1/1:5,5:11:15.04:215,15,0	1/1:5,10:16:17.82:262,18,0	1/1:7,5:13:12.03:168,12,0	0/0:20,0:20:6.02:0,6,99	0/0:14,0:14:6.02:0,6,99	0/0:21,0:19:25.02:0,25,445	0/0:27,0:24:3.01:0,3,54	0/0:16,0:14:2.93:0,3,53	1/1:11,8:19:15.05:234,15,0	0/0:16,0:18:25.76:0,26,505	0/0:25,0:25:15.14:0,15,647	1/1:11,0:12:6.01:73,6,0	0/0:23,0:22:32.99:0,33,525	0/0:13,0:13:14.90:0,15,164	0/0:6,0:9:9.03:0,9,166
chr10	69393748	.	A	ACACACG	899.36	PASS	AB=0.951;AC=12;AF=0.214;AN=56;BaseQRankSum=3.235;DP=590;FS=4.914;HRun=0;HaplotypeScore=149.2545;InbreedingCoeff=-0.0533;MQ=59.81;MQ0=9;MQRankSum=3.635;QD=3.94;ReadPosRankSum=1.525;VQSLOD=2.5720;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:25:99:269,0,186	0/0:10,0:10:23.63:0,24,281	0/0:28,0:16:35.12:0,35,343	0/0:26,0:13:25.32:0,25,304	0/1:18,0:18:61.86:67,0,62	0/0:25,0:25:53.98:0,54,685	0/0:37,0:37:65.96:0,66,664	0/0:27,0:26:34.31:0,34,442	0/0:25,0:25:37.20:0,37,340	0/0:22,0:21:17.24:0,17,338	0/0:13,0:13:11.99:0,12,100	0/0:15,0:15:25.90:0,26,237	0/0:17,0:17:26.95:0,27,261	0/0:20,0:20:44.84:0,45,486	0/0:24,0:24:50.56:0,51,545	0/0:17,0:17:41.93:0,42,432	1/1:5,16:23:6.02:152,6,0	0/1:4,15:22:12.95:142,0,13	0/0:19,0:18:17.37:0,17,274	0/1:26,0:23:0.15:0,0,106	0/1:20,0:16:5.40:5,0,180	0/0:25,0:25:48.01:0,48,511	0/1:25,0:25:99:118,0,194	0/1:23,0:24:99:145,0,291	0/0:11,0:11:21.01:0,21,214	0/1:22,0:21:5.23:5,0,358	0/1:13,0:12:95.92:96,0,105	0/1:10,0:9:43.31:43,0,70
chr10	69394798	.	CATG	C	10771.02	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=16.752;DP=789;FS=1.276;HRun=0;HaplotypeScore=115.2779;InbreedingCoeff=0.9952;MQ=88.80;MQ0=0;MQRankSum=-5.512;QD=39.60;ReadPosRankSum=4.288;VQSLOD=6.0989;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,58:60:99:2194,135,0	0/0:6,0:6:15.05:0,15,316	0/0:33,0:33:92.66:0,93,1925	0/0:26,0:26:69.23:0,69,1479	1/1:0,30:30:78.27:1299,78,0	0/0:26,0:26:75.23:0,75,1614	0/0:26,0:26:78.27:0,78,1749	0/0:34,0:34:99:0,99,2203	0/0:28,0:28:81.28:0,81,1832	1/1:2,27:29:81.25:1292,81,0	1/1:3,17:20:36.12:583,36,0	0/0:33,0:33:99:0,99,2225	0/0:29,0:29:87.30:0,87,1904	0/0:28,0:28:72.25:0,72,1595	0/0:47,0:47:99:0,138,3127	0/0:24,0:24:72.25:0,72,1612	0/0:42,0:42:99:0,114,2581	0/0:26,0:26:75.26:0,75,1698	1/1:1,13:14:36.12:597,36,0	1/1:0,32:32:78.27:1284,78,0	1/1:2,32:34:78.27:1285,78,0	0/0:26,0:26:78.26:0,78,1703	0/0:28,0:28:84.26:0,84,1712	0/0:26,0:26:75.26:0,75,1700	0/0:29,0:29:78.26:0,78,1725	1/1:2,21:23:63.22:1037,63,0	1/1:1,24:25:57.19:949,57,0	1/1:1,4:5:15.05:250,15,0
chr10	69395280	.	T	TGTGTGTGTGC	5770.03	PASS	AB=0.983;AC=21;AF=0.375;AN=56;BaseQRankSum=3.438;DP=660;FS=4.945;HRun=0;HaplotypeScore=189.2023;InbreedingCoeff=0.6614;MQ=58.04;MQ0=29;MQRankSum=-3.904;QD=23.46;ReadPosRankSum=-3.157;VQSLOD=2.9830;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:37:5.96:250,6,0	0/0:10,0:10:30.07:0,30,753	0/0:33,0:5:5.11:0,5,62	0/0:38,0:10:14.82:0,15,141	1/1:5,0:23:9.30:174,9,0	0/0:30,0:30:81.13:0,81,1773	0/0:25,0:25:58.89:0,59,909	0/0:30,0:29:70.68:0,71,934	0/0:22,0:21:60.09:0,60,1244	0/1:18,0:19:7.77:607,0,8	1/1:11,0:25:11.64:71,12,0	0/0:23,0:23:69.09:0,69,1425	0/0:27,0:26:75.08:0,75,1593	0/0:31,0:31:85.13:0,85,1925	0/0:21,0:21:63.15:0,63,1606	0/0:20,0:18:54.09:0,54,1211	0/0:28,0:28:27.09:0,27,457	0/1:13,0:13:49.88:412,0,50	1/1:6,0:14:38.92:853,39,0	1/1:7,7:16:11.93:434,12,0	0/0:4,15:22:0.47:0,0,1	0/0:28,0:28:80.88:0,81,1332	1/1:14,0:14:5.01:126,5,0	0/1:20,0:20:99:118,0,125	0/0:24,0:24:63.12:0,63,1399	1/1:10,10:25:64.58:1590,65,0	1/1:3,15:25:7.51:952,8,0	1/1:2,4:9:5.99:183,6,0
chr10	69396745	.	GGA	G	874.51	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.842;DP=743;FS=11.736;HRun=0;HaplotypeScore=94.8077;InbreedingCoeff=0.9698;MQ=91.12;MQ0=0;MQRankSum=-0.548;QD=26.50;ReadPosRankSum=-3.881;VQSLOD=3.3787;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,120,1977	0/0:4,0:4:12.04:0,12,206	0/0:30,0:30:60.51:0,61,953	0/0:43,0:41:85.55:0,86,1248	0/0:26,0:26:72.25:0,72,1234	0/0:27,0:26:69.22:0,69,1156	0/0:23,0:23:54.18:0,54,917	1/1:7,26:33:75.23:969,75,0	0/0:19,0:19:51.17:0,51,867	0/0:30,0:30:87.28:0,87,1440	0/0:16,0:16:42.14:0,42,720	0/0:22,0:22:54.16:0,54,883	0/0:30,0:30:78.26:0,78,1300	0/0:30,0:30:81.28:0,81,1387	0/0:34,0:34:93.32:0,93,1580	0/0:37,0:37:90.29:0,90,1516	0/0:46,0:46:99:0,132,2256	0/0:24,0:24:69.24:0,69,1174	0/0:21,0:21:54.17:0,54,869	0/0:17,0:17:45.13:0,45,742	0/0:29,0:29:78.25:0,78,1304	0/0:31,0:31:90.30:0,90,1511	0/0:13,0:13:30.10:0,30,513	0/0:27,0:27:69.24:0,69,1174	0/0:20,0:20:54.18:0,54,926	0/0:28,0:28:72.24:0,72,1207	0/0:22,0:22:57.19:0,57,962	0/0:17,0:17:51.14:0,51,819
chr10	69399845	.	A	AC	1023.04	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-7.096;DP=749;FS=11.032;HRun=5;HaplotypeScore=72.8463;InbreedingCoeff=0.9988;MQ=81.71;MQ0=0;MQRankSum=0.214;QD=33.00;ReadPosRankSum=-4.520;VQSLOD=1.4748;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:58,0:58:99:0,156,2010	0/0:10,0:10:30.10:0,30,390	0/0:22,0:22:63.16:0,63,770	0/0:25,0:25:51.98:0,52,688	0/0:31,0:31:78.24:0,78,994	0/0:29,0:29:81.25:0,81,1038	0/0:24,0:24:69.22:0,69,895	1/1:3,28:31:78.23:1118,78,0	0/0:24,0:24:72.23:0,72,933	0/0:36,0:36:99:0,108,1400	0/0:12,0:12:36.12:0,36,466	0/0:31,0:31:93.30:0,93,1208	0/0:22,0:22:63.20:0,63,810	0/0:23,0:23:69.19:0,69,864	0/0:38,0:38:99:0,114,1466	0/0:28,0:28:84.27:0,84,1088	0/0:37,0:37:99:0,111,1423	0/0:14,0:14:42.14:0,42,543	0/0:20,0:20:57.16:0,57,708	0/0:23,0:23:69.22:0,69,893	0/0:41,0:41:99:0,111,1425	0/0:28,0:28:84.27:0,84,1088	0/0:21,0:21:63.20:0,63,809	0/0:40,0:40:99:0,114,1448	0/0:24,0:24:72.17:0,72,885	0/0:24,0:24:69.22:0,69,894	0/0:23,0:21:63.20:0,63,818	0/0:10,0:10:30.10:0,30,389
chr10	69401439	.	C	CTTT	529.70	PASS	AB=0.742;AC=5;AF=0.089;AN=56;BaseQRankSum=6.431;DP=612;FS=0.757;HRun=14;HaplotypeScore=113.2752;InbreedingCoeff=0.3136;MQ=69.93;MQ0=1;MQRankSum=-2.318;QD=5.89;ReadPosRankSum=-2.868;VQSLOD=-0.1985;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:9,0:23:9.27:9,0,42	0/1:9,0:9:2.31:2,0,164	0/0:26,0:17:26.51:0,27,203	0/0:17,0:10:6.60:0,7,53	0/1:11,0:35:28.11:79,0,28	0/0:23,0:25:38.24:0,38,375	0/0:24,0:27:39.12:0,39,444	0/0:9,0:29:56.61:0,57,360	0/0:12,0:12:23.89:0,24,246	0/0:20,0:20:30.39:0,30,335	0/0:21,0:23:46.34:0,46,481	0/0:9,0:9:17.79:0,18,184	0/0:24,0:24:39.09:0,39,419	0/0:15,0:15:29.90:0,30,307	0/0:29,0:29:53.40:0,53,547	0/0:23,0:25:32.08:0,32,486	1/1:6,14:23:35.71:553,36,0	0/0:19,0:22:33.40:0,33,432	0/0:27,0:32:29.93:0,30,341	0/0:29,0:34:51.19:0,51,520	0/0:4,0:5:5.80:0,6,48	0/0:20,0:22:11.09:0,11,276	0/0:17,0:17:38.85:0,39,389	0/0:13,0:13:26.89:0,27,277	0/0:26,0:29:30.97:0,31,474	0/0:21,0:23:27.25:0,27,463	0/0:23,0:23:4.25:0,4,225	0/0:14,0:16:27.08:0,27,303
chr10	69402266	.	GAGGAAGGA	G	3939.69	PASS	AB=0.786;AC=26;AF=0.464;AN=56;BaseQRankSum=12.649;DP=548;FS=2.939;HRun=0;HaplotypeScore=164.7792;InbreedingCoeff=0.7266;MQ=56.28;MQ0=6;MQRankSum=-7.743;QD=15.51;ReadPosRankSum=-0.591;VQSLOD=3.0555;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:10,0:16:22.09:300,22,0	0/0:7,0:7:15.05:0,15,449	0/0:19,0:11:3.01:0,3,80	0/0:20,0:19:4.97:0,5,81	1/1:16,0:21:24.18:400,24,0	0/0:18,0:18:42.14:0,42,1628	0/0:22,0:21:33.11:0,33,1273	1/1:15,0:14:2.56:10,3,0	0/0:22,0:22:54.16:0,54,1979	1/1:20,0:20:33.69:530,34,0	1/1:16,0:16:18.06:317,18,0	0/0:23,0:22:39.12:0,39,1481	0/0:23,0:23:51.16:0,51,1545	0/0:25,0:25:66.23:0,66,2272	0/0:28,0:28:45.15:0,45,1600	0/1:19,1:20:31.91:32,0,1597	0/0:28,0:28:51.32:0,51,1747	0/0:22,0:22:45.14:0,45,1342	1/1:17,0:16:16.15:234,16,0	1/1:17,0:17:28.03:484,28,0	1/1:24,0:22:1.19:18,1,0	0/0:12,0:12:21.05:0,21,688	1/1:6,13:19:17.93:462,18,0	0/1:10,16:26:29.35:270,0,29	0/0:23,0:23:51.16:0,51,1678	1/1:23,0:24:38.59:515,39,0	1/1:18,0:18:17.96:335,18,0	1/1:1,0:1:3.01:33,3,0
chr10	69402284	.	GGAAGGAAGGAA	G	7188.96	PASS	AB=1.000;AC=21;AF=0.375;AN=56;BaseQRankSum=12.231;DP=491;FS=1.358;HRun=0;HaplotypeScore=164.6062;InbreedingCoeff=0.5851;MQ=54.46;MQ0=14;MQRankSum=-5.110;QD=33.75;ReadPosRankSum=0.914;VQSLOD=4.7215;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:20,0:20:5.77:475,0,6	0/0:7,0:7:21.07:0,21,750	0/0:7,0:1:3.01:0,3,87	0/0:9,0:7:2.06:0,2,152	0/1:16,0:15:15.12:591,0,15	0/0:18,0:18:54.17:0,54,2354	0/0:21,0:20:56.42:0,56,1865	0/1:13,0:9:45.58:46,0,46	0/0:22,0:22:66.22:0,66,2848	1/1:2,14:15:42.14:1219,42,0	1/1:2,11:13:27:720,27,0	0/0:21,0:19:57.19:0,57,2308	0/0:21,0:21:63.21:0,63,2347	0/0:28,0:28:84.27:0,84,3404	0/0:21,0:21:63.16:0,63,2433	0/0:19,0:19:46.51:0,47,2445	0/0:28,0:28:16.54:0,17,2273	0/0:23,0:22:45.15:0,45,1871	1/1:2,11:11:33.05:698,33,0	1/1:2,13:15:39.09:1079,39,0	1/1:6,17:21:5.64:86,6,0	0/0:12,0:11:30.08:0,30,1062	0/1:16,0:16:30.84:31,0,184	0/1:25,0:25:0.16:0,0,186	0/0:21,0:21:60.20:0,60,2457	1/1:5,20:24:63.20:1456,63,0	1/1:1,15:16:17.38:651,17,0	1/1:2,0:2:6.02:138,6,0
chr10	69402285	.	GAA	G	808.57	PASS	AB=0.966;AC=15;AF=0.268;AN=56;BaseQRankSum=12.184;DP=480;FS=0.000;HRun=2;HaplotypeScore=107.6444;InbreedingCoeff=0.1359;MQ=55.11;MQ0=14;MQRankSum=-8.486;QD=4.52;ReadPosRankSum=4.370;VQSLOD=-0.4793;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:21,0:21:42.69:43,0,215	0/0:7,0:7:21.07:0,21,375	0/0:6,0:1:3.01:0,3,61	0/0:7,0:6:13.97:0,14,139	0/1:12,4:15:93.09:132,0,93	0/0:18,0:18:54.18:0,54,1029	0/0:21,0:20:58.75:0,59,1043	0/1:9,0:4:14.86:15,0,59	0/0:22,0:22:66.23:0,66,1255	1/1:15,0:14:9.84:141,10,0	1/1:12,0:12:16.79:97,17,0	0/0:21,0:19:57.19:0,57,1047	0/0:22,0:22:66.22:0,66,1184	0/0:29,0:29:87.30:0,87,1642	0/0:21,0:21:63.17:0,63,1135	0/0:19,0:19:48.10:0,48,1017	0/0:28,0:28:69.69:0,70,1337	0/0:24,0:23:42.46:0,42,853	0/1:13,0:11:57.15:91,0,57	0/1:14,0:15:25.17:196,0,25	0/1:20,1:20:25.49:25,0,59	0/0:11,0:10:24.40:0,24,480	0/1:18,0:18:15.50:15,0,240	0/0:25,0:25:6.05:0,6,266	0/0:20,0:20:60.20:0,60,1116	0/1:22,0:21:99:104,0,188	1/1:15,0:15:17.19:101,17,0	0/1:2,0:2:20.05:20,0,34
chr10	69402289	.	GAAGGAA	G	2713.28	PASS	AB=1.000;AC=20;AF=0.357;AN=56;BaseQRankSum=13.786;DP=463;FS=0.000;HRun=0;HaplotypeScore=127.5255;InbreedingCoeff=0.6056;MQ=54.10;MQ0=14;MQRankSum=-5.340;QD=14.51;ReadPosRankSum=1.997;VQSLOD=2.5324;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:20,0:20:46.73:131,0,47	0/0:6,0:6:18.06:0,18,480	0/0:5,0:1:3.01:0,3,95	0/0:2,0:1:3.01:0,3,91	1/1:9,4:12:11.11:236,11,0	0/0:18,0:18:54.18:0,54,1633	0/0:21,0:20:58.42:0,58,1482	0/0:8,0:3:8.69:0,9,73	0/0:21,0:21:63.20:0,63,1903	1/1:14,0:14:36.18:439,36,0	1/1:12,0:12:21.44:263,21,0	0/0:20,0:18:54.17:0,54,1484	0/0:23,0:23:69.21:0,69,1659	0/0:30,0:30:90.29:0,90,2496	0/0:19,0:19:57.19:0,57,1697	0/0:18,0:18:12.06:0,12,1577	0/0:30,0:30:9.73:0,10,1390	0/0:25,0:24:50.50:0,51,1301	1/1:13,0:11:28.03:256,28,0	1/1:15,0:15:31.41:405,31,0	0/1:20,0:19:8.90:19,0,9	0/0:11,0:10:29.46:0,29,727	0/1:19,0:19:99:217,0,173	0/1:21,0:21:95.27:140,0,95	0/0:19,0:19:57.18:0,57,1620	1/1:22,0:21:57.90:503,58,0	1/1:15,0:15:17.62:263,18,0	1/1:2,0:2:5.50:42,6,0
chr10	69402295	.	A	AG	1542.33	PASS	AB=1.000;AC=17;AF=0.327;AN=52;BaseQRankSum=5.447;DP=485;FS=1.243;HRun=7;HaplotypeScore=107.0453;InbreedingCoeff=0.8452;MQ=53.79;MQ0=17;MQRankSum=-3.157;QD=9.82;ReadPosRankSum=0.031;VQSLOD=1.6522;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:32.11:0,32,215	0/0:7,0:7:12.01:0,12,116	./.	./.	0/0:15,0:14:31.71:0,32,160	0/0:19,0:19:45.06:0,45,434	0/0:19,0:18:30.04:0,30,290	0/0:9,0:4:0.77:0,1,50	0/0:22,0:22:45.05:0,45,431	1/1:15,0:14:11.64:77,12,0	1/1:13,0:13:16.93:130,17,0	0/0:23,0:20:51.08:0,51,492	0/0:22,0:21:51.07:0,51,492	0/0:30,0:30:81.04:0,81,764	0/0:25,0:25:48.04:0,48,459	0/0:18,0:18:53.98:0,54,508	1/1:9,26:34:60.18:724,60,0	0/0:23,0:22:32.87:0,33,282	1/1:15,0:11:19.98:164,20,0	1/1:18,0:17:15.58:77,16,0	0/1:20,0:19:2.75:38,0,3	0/0:13,0:12:32.95:0,33,305	0/0:19,0:19:35.21:0,35,268	0/0:22,0:22:23.64:0,24,173	0/0:20,0:20:42.05:0,42,401	1/1:22,0:21:46.18:469,46,0	1/1:15,0:15:7.35:17,7,0	1/1:2,1:2:3.01:36,3,0
chr10	69402302	.	G	GAGGA	533.25	PASS	AB=0.605;AC=5;AF=0.096;AN=52;BaseQRankSum=1.915;DP=498;FS=8.319;HRun=0;HaplotypeScore=135.3593;InbreedingCoeff=0.6169;MQ=53.52;MQ0=17;MQRankSum=-2.876;QD=9.87;ReadPosRankSum=-1.305;VQSLOD=1.7196;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:9,14:26:62.51:183,0,63	0/0:8,0:8:15.05:0,15,220	./.	./.	1/1:17,0:16:21.02:374,21,0	0/0:20,0:20:21.04:0,21,281	0/0:19,0:18:31.28:0,31,435	1/1:11,0:5:5.96:94,6,0	0/0:20,0:20:33.09:0,33,466	0/0:12,0:11:9.03:0,9,127	0/0:12,0:12:15.05:0,15,190	0/0:22,0:19:27.09:0,27,413	0/0:21,0:20:39.13:0,39,585	0/0:30,0:30:48.15:0,48,703	0/0:22,0:22:39.12:0,39,576	0/0:20,0:20:21.04:0,21,283	0/0:34,0:32:36.11:0,36,453	0/0:12,0:25:6.01:0,6,56	0/0:15,0:11:21.04:0,21,233	0/0:16,0:17:21.05:0,21,253	0/0:20,0:19:9.01:0,9,93	0/0:15,0:14:21.04:0,21,281	0/0:21,0:21:26.91:0,27,364	0/0:24,0:24:20.07:0,20,300	0/0:18,0:18:30.08:0,30,425	0/0:27,0:26:51.06:0,51,571	0/0:15,0:15:20.85:0,21,239	0/0:4,0:3:9.03:0,9,122
chr10	69402737	.	T	TA	637.96	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-6.872;DP=577;FS=0.000;HRun=9;HaplotypeScore=57.4928;InbreedingCoeff=0.8562;MQ=73.91;MQ0=0;MQRankSum=-0.780;QD=23.63;ReadPosRankSum=-4.728;VQSLOD=2.2206;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:80.85:0,81,678	0/0:10,0:10:26.99:0,27,234	0/0:12,0:12:17.83:0,18,144	0/0:12,0:11:9.96:0,10,99	0/0:20,1:21:20.80:0,21,410	0/0:27,0:27:71.97:0,72,625	0/0:26,0:26:68.95:0,69,594	1/1:4,23:26:49.08:733,49,0	0/0:16,0:16:38.96:0,39,334	0/0:24,0:24:62.96:0,63,545	0/0:16,0:16:35.98:0,36,312	0/0:19,0:19:56.99:0,57,495	0/0:20,0:20:50.99:0,51,443	0/0:21,0:21:59.95:0,60,513	0/0:14,0:14:35.96:0,36,309	0/0:29,0:29:77.96:0,78,670	0/0:19,0:19:50.98:0,51,443	0/0:17,0:17:47.99:0,48,417	0/0:15,0:15:41.98:0,42,364	0/0:20,0:20:53.98:0,54,469	0/0:20,0:20:50.97:0,51,443	0/0:31,0:31:77.96:0,78,673	0/0:21,0:21:62.96:0,63,541	0/0:17,0:17:50.99:0,51,443	0/0:22,0:22:56.98:0,57,493	0/0:26,0:26:68.98:0,69,599	0/0:40,0:39:99:0,105,911	0/0:3,0:3:5.99:0,6,52
chr10	69402986	.	CG	C	1214.87	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.772;DP=797;FS=7.960;HRun=1;HaplotypeScore=76.1590;InbreedingCoeff=0.8502;MQ=91.22;MQ0=0;MQRankSum=-0.316;QD=37.96;ReadPosRankSum=-4.665;VQSLOD=1.6144;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,144,2247	0/0:9,0:9:27.09:0,27,431	0/0:31,0:31:90.20:0,90,1385	0/0:33,0:33:85.52:0,86,1243	0/0:29,0:29:87.20:0,87,1280	0/0:20,0:20:60.08:0,60,873	0/0:37,0:37:99:0,111,1726	1/1:0,32:32:96.30:1310,96,0	0/0:26,0:26:78.25:0,78,1221	0/0:35,0:35:99:0,102,1562	0/0:30,0:30:84.29:0,84,1336	0/0:35,0:35:99:0,105,1641	0/0:27,0:27:78.22:0,78,1212	0/0:30,0:30:87.30:0,87,1377	0/0:41,0:41:99:0,123,1814	0/0:36,0:36:99:0,108,1678	0/0:28,0:28:84.29:0,84,1341	0/0:21,0:21:63.19:0,63,980	0/0:23,0:23:69.22:0,69,1055	0/0:22,0:22:63.21:0,63,1005	0/0:41,0:41:99:0,123,1924	0/0:31,0:31:93.25:0,93,1453	0/0:20,0:20:60.20:0,60,951	0/0:28,0:28:84.27:0,84,1311	0/0:28,0:28:84.25:0,84,1314	0/0:26,0:26:72.20:0,72,1097	0/0:29,0:28:87.27:0,87,1358	0/0:1,0:1:3.01:0,3,48
chr10	69403492	.	TG	T	1346.33	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=2.704;DP=716;FS=7.709;HRun=1;HaplotypeScore=98.3504;InbreedingCoeff=0.9911;MQ=83.62;MQ0=0;MQRankSum=-1.067;QD=36.39;ReadPosRankSum=-0.281;VQSLOD=3.1670;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,157,2493	0/0:9,0:9:27.08:0,27,409	0/0:26,0:26:75.71:0,76,1160	0/0:20,0:20:57.17:0,57,875	0/0:23,0:23:66.21:0,66,1030	0/0:29,0:29:87.28:0,87,1365	0/0:29,0:29:87.28:0,87,1368	0/0:25,0:25:72.18:0,72,1151	0/0:26,0:26:78.24:0,78,1201	0/0:26,0:26:78.27:0,78,1248	0/0:29,0:29:84.27:0,84,1319	0/0:28,0:28:84.29:0,84,1339	0/0:37,0:37:99:0,111,1740	0/0:25,0:25:75.26:0,75,1191	0/0:26,0:26:78.27:0,78,1247	0/0:30,0:30:90.30:0,90,1414	0/0:24,0:23:69.24:0,69,1103	0/0:10,0:10:30.10:0,30,465	0/0:29,0:29:87.29:0,87,1368	0/0:24,0:24:72.23:0,72,1125	0/0:38,0:38:99:0,111,1704	0/0:28,0:28:84.24:0,84,1290	1/1:0,14:14:39.13:545,39,0	1/1:0,23:23:66.22:923,66,0	0/0:24,0:24:72.21:0,72,1101	0/0:27,0:27:78.27:0,78,1245	0/0:28,0:28:84.27:0,84,1308	0/0:5,0:5:15.05:0,15,240
chr10	69403821	.	TG	T	7433.59	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=14.920;DP=704;FS=2.993;HRun=3;HaplotypeScore=64.8533;InbreedingCoeff=0.9897;MQ=87.81;MQ0=0;MQRankSum=-6.989;QD=35.23;ReadPosRankSum=3.559;VQSLOD=5.5848;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,105,1508	0/0:4,0:4:12.04:0,12,173	0/0:31,0:31:84.24:0,84,1158	0/0:17,0:17:42.14:0,42,603	0/0:35,0:35:99:0,102,1443	0/0:25,0:25:75.25:0,75,1075	0/0:21,0:21:63.15:0,63,839	0/0:33,0:33:99:0,99,1377	0/0:26,0:26:78.26:0,78,1123	1/1:0,33:33:99:1215,99,0	1/1:0,25:25:69.22:855,69,0	0/0:29,0:29:87.29:0,87,1253	0/0:23,0:23:66.21:0,66,931	0/0:29,0:29:87.28:0,87,1234	0/0:23,0:23:63.21:0,63,907	0/0:22,0:22:63.21:0,63,907	0/0:25,0:25:72.24:0,72,1029	0/0:21,0:21:63.21:0,63,907	1/1:1,22:23:63.16:753,63,0	1/1:0,34:34:93.29:1153,93,0	1/1:0,22:22:66.21:818,66,0	0/0:30,0:30:90.30:0,90,1295	0/0:20,0:20:60.16:0,60,810	0/0:19,0:19:51.17:0,51,731	0/0:25,0:25:75.25:0,75,1078	1/1:1,39:40:99:1450,117,0	1/1:0,30:30:84.26:1041,84,0	1/1:0,4:4:12.04:149,12,0
chr10	69403903	.	T	TAA	1552.36	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-8.423;DP=663;FS=7.878;HRun=7;HaplotypeScore=79.8683;InbreedingCoeff=0.9894;MQ=77.45;MQ0=0;MQRankSum=-5.743;QD=39.80;ReadPosRankSum=-4.383;VQSLOD=1.8262;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:60.14:0,60,687	0/0:6,0:6:18.05:0,18,210	0/0:19,0:19:42.07:0,42,467	0/0:13,0:13:29.99:0,30,335	0/0:40,0:40:93.23:0,93,1073	0/0:23,0:23:63.18:0,63,734	0/0:19,0:19:48.14:0,48,559	1/1:3,35:39:99:1647,105,0	0/0:21,0:21:54.14:0,54,629	0/0:19,0:19:42.11:0,42,489	0/0:26,0:26:57.14:0,57,664	0/0:32,0:32:81.22:0,81,943	0/0:27,0:27:69.19:0,69,804	0/0:21,0:21:60.18:0,60,699	0/0:27,0:27:75.22:0,75,874	0/0:22,0:22:60.17:0,60,699	0/0:29,0:29:72.17:0,72,827	0/0:19,0:19:51.15:0,51,594	0/0:15,0:15:42.12:0,42,489	0/0:27,0:27:63.17:0,63,734	0/0:19,0:19:48.13:0,48,559	0/0:31,0:31:84.23:0,84,967	0/0:20,0:20:57.16:0,57,664	0/0:15,0:15:42.12:0,42,489	0/0:23,0:23:66.20:0,66,769	0/0:42,0:42:99:0,99,1145	0/0:36,0:36:84.22:0,84,978	0/0:9,0:9:24.06:0,24,280
chr10	69404017	.	G	GGACA	2552.91	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-3.409;DP=667;FS=3.073;HRun=0;HaplotypeScore=107.6448;InbreedingCoeff=0.9976;MQ=88.35;MQ0=0;MQRankSum=-8.883;QD=65.46;ReadPosRankSum=-5.606;VQSLOD=3.5636;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:75.21:0,75,1333	0/0:10,0:10:27.08:0,27,474	0/0:29,0:29:84.19:0,84,1386	0/0:20,0:20:47.65:0,48,797	0/0:18,0:18:51.17:0,51,952	0/0:30,0:29:84.29:0,84,1552	0/0:26,0:26:69.18:0,69,1171	1/1:20,17:39:99:2648,108,0	0/0:28,0:28:78.27:0,78,1449	0/0:28,0:28:84.28:0,84,1526	0/0:19,0:19:54.19:0,54,1006	0/0:20,0:20:45.15:0,45,840	0/0:24,0:24:72.23:0,72,1304	0/0:25,0:25:69.24:0,69,1275	0/0:30,0:29:90.31:0,90,1663	0/0:18,0:17:48.15:0,48,866	0/0:33,0:33:90.31:0,90,1666	0/0:17,0:17:39.13:0,39,683	0/0:18,0:17:51.16:0,51,875	0/0:29,0:29:87.28:0,87,1579	0/0:11,0:11:33.11:0,33,616	0/0:17,0:17:48.15:0,48,858	0/0:17,0:17:51.16:0,51,910	0/0:36,0:36:99:0,102,1824	0/0:24,0:24:66.23:0,66,1231	0/0:37,0:37:99:0,102,1904	0/0:30,0:29:87.30:0,87,1604	0/0:9,0:9:27.09:0,27,504
chr10	69405420	.	GTTCTAAGTTGGTGT	G	1774.40	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.601;DP=465;FS=0.000;HRun=0;HaplotypeScore=183.4171;InbreedingCoeff=0.9534;MQ=79.30;MQ0=0;MQRankSum=-5.892;QD=39.43;ReadPosRankSum=0.502;VQSLOD=2.6759;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,11:12:9.03:377,9,0	0/0:5,0:5:15.05:0,15,1050	0/0:11,0:11:27.09:0,27,1415	0/0:13,0:13:36.12:0,36,2075	1/1:2,31:33:42.06:1512,42,0	0/0:22,0:22:63.22:0,63,4019	0/0:19,0:19:57.20:0,57,3867	0/0:11,0:11:33.11:0,33,1988	0/0:15,0:15:45.15:0,45,3139	0/0:16,0:16:48.16:0,48,3300	0/0:33,0:33:93.32:0,93,6039	0/0:16,0:16:45.14:0,45,2894	0/0:11,0:11:33.11:0,33,2298	0/0:12,0:12:36.10:0,36,2030	0/0:17,0:17:48.16:0,48,3048	0/0:12,0:12:36.12:0,36,2519	0/0:29,0:29:69.24:0,69,4528	0/0:27,0:27:78.27:0,78,4767	0/0:11,0:11:33.07:0,33,1811	0/0:20,0:20:60.21:0,60,3884	0/0:17,0:17:48.16:0,48,3245	0/0:9,0:9:27.09:0,27,1877	0/0:15,0:15:42.60:0,43,2719	0/0:8,0:8:18.06:0,18,1221	0/0:21,0:21:63.22:0,63,4410	0/0:18,0:18:54.19:0,54,3610	0/0:25,0:25:72.25:0,72,4498	0/0:7,0:7:21.07:0,21,1468
chr10	69405502	.	ATATGTGTGTG	A	378.83	PASS	AB=0.914;AC=9;AF=0.161;AN=56;BaseQRankSum=3.095;DP=361;FS=0.000;HRun=0;HaplotypeScore=118.1211;InbreedingCoeff=0.2150;MQ=62.25;MQ0=11;MQRankSum=-1.135;QD=4.46;ReadPosRankSum=0.497;VQSLOD=2.1881;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:29.81:0,30,227	0/0:7,0:7:12.50:0,12,379	0/0:13,0:5:2.16:0,2,41	0/0:15,0:7:19.04:0,19,121	0/1:17,0:17:34.02:34,0,103	0/0:20,0:20:50.99:0,51,988	0/0:12,0:12:15.86:0,16,221	0/0:15,0:14:38.70:0,39,297	0/0:12,0:12:33.05:0,33,834	0/0:12,0:11:26.73:0,27,192	0/1:12,0:12:41.20:41,0,61	0/0:14,0:14:30.03:0,30,703	0/0:14,0:14:33.97:0,34,911	0/0:8,0:7:20.83:0,21,406	0/0:11,0:10:27.03:0,27,643	0/0:10,0:10:27.09:0,27,939	1/1:0,16:16:3.01:100,3,0	0/0:28,0:26:33.01:0,33,584	0/0:14,0:14:35.17:0,35,248	0/1:12,0:12:40.69:42,0,41	0/0:8,0:8:3:0,3,25	0/0:6,0:6:11.98:0,12,98	0/1:3,0:11:15.24:142,0,15	1/1:11,0:11:14.97:122,15,0	0/0:13,0:13:30.01:0,30,554	0/0:12,0:12:23.89:0,24,190	0/0:11,0:11:26.66:0,27,190	0/1:5,0:4:39.24:39,0,45
chr10	69405507	.	T	TAC	1415.28	PASS	AB=1.000;AC=18;AF=0.321;AN=56;BaseQRankSum=8.058;DP=355;FS=2.233;HRun=0;HaplotypeScore=76.9699;InbreedingCoeff=0.7458;MQ=54.10;MQ0=21;MQRankSum=-1.000;QD=14.44;ReadPosRankSum=-1.098;VQSLOD=3.2531;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:20:30.09:0,30,434	0/0:7,0:7:11.72:0,12,166	0/1:10,0:2:5.97:6,0,34	0/1:12,0:4:8.18:8,0,17	0/0:16,0:15:17.93:0,18,240	0/0:21,0:21:54.15:0,54,761	0/0:14,0:14:17.19:0,17,210	0/0:8,0:7:10.72:0,11,205	0/0:11,0:11:27.07:0,27,349	1/1:1,10:10:27.09:372,27,0	1/1:8,0:8:5.97:66,6,0	0/0:15,0:14:30.05:0,30,409	0/0:16,0:16:32.85:0,33,496	0/0:8,0:7:21.07:0,21,323	0/0:15,0:13:30.10:0,30,439	0/0:13,0:12:29.67:0,30,439	0/0:18,0:18:5.37:0,5,24	0/0:28,0:26:67.97:0,68,890	1/1:3,10:13:26.34:382,26,0	1/1:10,0:10:8.99:94,9,0	1/1:9,0:6:2.90:16,3,0	0/0:7,0:7:11.66:0,12,178	0/0:13,0:12:8.80:0,9,90	0/0:12,0:12:15.05:0,15,228	0/0:14,0:13:30.07:0,30,418	1/1:1,8:9:18.04:233,18,0	1/1:11,0:11:27.03:341,27,0	1/1:4,0:3:9:89,9,0
chr10	69406251	.	A	ACACT	2630.57	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-5.610;DP=674;FS=2.091;HRun=0;HaplotypeScore=109.3459;InbreedingCoeff=0.9998;MQ=85.11;MQ0=0;MQRankSum=-4.376;QD=64.16;ReadPosRankSum=-5.464;VQSLOD=3.9908;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:78.27:0,78,1460	0/0:14,0:14:39.10:0,39,666	0/0:27,0:27:66.20:0,66,1233	0/0:20,0:20:42.53:0,43,1018	0/0:22,0:22:66.21:0,66,1195	0/0:34,0:34:99:0,99,1837	0/0:24,0:24:72.25:0,72,1351	1/1:10,29:41:99:2725,114,0	0/0:22,0:22:66.23:0,66,1244	0/0:24,0:24:72.21:0,72,1293	0/0:24,0:24:66.23:0,66,1243	0/0:23,0:23:66.23:0,66,1253	0/0:22,0:22:63.22:0,63,1196	0/0:18,0:18:51.17:0,51,958	0/0:26,0:26:75.24:0,75,1384	0/0:29,0:29:87.27:0,87,1579	0/0:17,0:17:48.16:0,48,911	0/0:26,0:26:72.25:0,72,1340	0/0:17,0:17:51.17:0,51,930	0/0:23,0:23:63.22:0,63,1169	0/0:22,0:22:63.22:0,63,1174	0/0:20,0:20:57.16:0,57,1008	0/0:14,0:14:42.13:0,42,751	0/0:29,0:28:84.24:0,84,1544	0/0:19,0:19:48.16:0,48,911	0/0:31,0:31:87.30:0,87,1632	0/0:39,0:39:99:0,111,1982	0/0:19,0:19:57.20:0,57,1082
chr10	69406462	.	G	GT	380.25	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-4.518;DP=491;FS=11.350;HRun=6;HaplotypeScore=50.9123;InbreedingCoeff=0.9938;MQ=85.54;MQ0=0;MQRankSum=-0.560;QD=21.12;ReadPosRankSum=-4.450;VQSLOD=1.1005;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:66.13:0,66,665	0/0:11,0:11:33.08:0,33,337	0/0:17,0:19:42.58:0,43,426	0/0:13,0:14:26.97:0,27,246	0/0:22,0:22:66.15:0,66,673	0/0:27,0:27:75.15:0,75,758	0/0:15,0:15:45.10:0,45,459	1/1:4,14:18:39.10:475,39,0	0/0:20,0:20:51.05:0,51,520	0/0:20,0:20:57.13:0,57,581	0/0:15,0:15:36.06:0,36,360	0/0:12,0:12:36.08:0,36,367	0/0:24,0:24:66.15:0,66,673	0/0:12,0:12:36.08:0,36,367	0/0:11,0:11:33.07:0,33,336	0/0:9,0:9:24.05:0,24,245	0/0:19,0:19:57.10:0,57,572	0/0:29,0:29:75.17:0,75,765	0/0:20,0:20:54.12:0,54,551	0/0:28,0:28:81.18:0,81,825	0/0:9,0:9:27.05:0,27,270	0/0:14,0:14:42.10:0,42,428	0/0:16,0:16:48.11:0,48,489	0/0:11,0:11:30.07:0,30,306	0/0:11,0:11:30.07:0,30,306	0/0:23,0:23:66.15:0,66,673	0/0:25,0:25:69.15:0,69,704	0/0:14,0:14:42.10:0,42,428
chr10	69408350	.	G	GTCATTGTAGACCTAGTGTGTGA	40477.04	PASS	AB=1.000;AC=29;AF=0.537;AN=54;BaseQRankSum=-9.187;DP=840;FS=14.336;HRun=0;HaplotypeScore=327.7901;InbreedingCoeff=0.8771;MQ=69.79;MQ0=0;MQRankSum=-14.494;QD=85.04;ReadPosRankSum=-3.152;VQSLOD=3.0702;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,9:54:30.10:3112,30,0	0/0:15,0:15:36.08:0,36,1822	0/0:19,0:19:44.78:0,45,1333	0/0:12,0:12:21.04:0,21,689	1/1:3,5:24:15.05:1531,15,0	0/1:26,0:26:99:133,0,3104	0/0:36,0:36:93.26:0,93,3727	1/1:58,0:58:99:8019,159,0	0/0:31,0:31:84.25:0,84,4522	1/1:2,6:46:99:6853,111,0	1/1:2,1:22:3.01:311,3,0	0/0:46,0:46:99:0,126,6348	0/0:49,0:49:99:0,135,6921	0/0:30,0:30:90.29:0,90,4354	0/0:42,0:42:99:0,108,5203	0/0:37,0:37:99:0,111,5181	1/1:2,5:18:18.06:1816,18,0	1/1:2,3:17:12.04:1248,12,0	1/1:3,2:22:54.11:2493,54,0	1/1:3,7:30:21.07:2180,21,0	1/1:5,1:34:15.05:1546,15,0	0/0:28,0:28:78.22:0,78,3739	1/1:2,3:19:9.03:934,9,0	1/1:2,5:39:12.04:1095,12,0	0/0:17,0:17:48.12:0,48,2248	1/1:0,5:29:80.58:5843,81,0	1/1:2,10:37:36.59:3363,37,0	./.
chr10	69408657	.	AAAGG	A	9165.03	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=1.124;DP=596;FS=13.065;HRun=0;HaplotypeScore=205.6047;InbreedingCoeff=0.9938;MQ=48.16;MQ0=13;MQRankSum=-8.202;QD=33.21;ReadPosRankSum=0.154;VQSLOD=3.5480;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:16,19:34:81.23:1308,81,0	0/0:13,0:13:36.11:0,36,771	0/0:28,0:9:18.02:0,18,337	0/0:26,0:12:30.06:0,30,406	1/1:2,25:27:57.19:949,57,0	0/0:18,0:18:51.16:0,51,1137	0/0:18,0:18:42.14:0,42,900	1/1:16,9:21:39.08:556,39,0	0/0:27,0:27:69.22:0,69,1539	1/1:7,6:13:33.11:542,33,0	1/1:11,6:17:27.09:438,27,0	0/0:26,0:26:72.24:0,72,1664	0/0:28,0:28:75.26:0,75,1780	0/0:24,0:24:63.20:0,63,1476	0/0:19,0:19:48.16:0,48,1124	0/0:23,0:23:63.21:0,63,1469	0/0:19,0:19:53.92:0,54,931	1/1:17,2:18:27.35:309,27,0	1/1:11,4:15:29.70:440,30,0	1/1:11,9:20:48.12:785,48,0	1/1:5,4:9:12.04:192,12,0	0/0:23,0:23:66.23:0,66,1536	1/1:6,7:13:30.06:437,30,0	1/1:9,6:15:24:341,24,0	0/0:28,0:27:69.23:0,69,1637	1/1:8,21:29:78.21:1296,78,0	1/1:8,16:24:60.20:1008,60,0	1/1:5,10:14:33.47:564,33,0
chr10	69408674	.	G	GAGAA	1296.36	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-2.847;DP=626;FS=8.607;HRun=0;HaplotypeScore=200.7451;InbreedingCoeff=0.9964;MQ=49.20;MQ0=12;MQRankSum=1.997;QD=37.04;ReadPosRankSum=1.520;VQSLOD=3.1539;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:32:72.22:0,72,1108	0/0:13,0:13:33.08:0,33,521	0/0:34,0:11:23.81:0,24,327	0/0:33,0:17:45:0,45,677	0/0:30,0:30:63.14:0,63,935	0/0:21,0:21:53.54:0,54,842	0/0:20,0:20:57.15:0,57,881	0/0:30,0:27:54.03:0,54,812	0/0:24,0:24:63.22:0,63,1067	0/0:16,0:16:45.14:0,45,699	0/0:11,0:11:27.09:0,27,407	0/0:24,0:24:63.16:0,63,964	0/0:28,0:28:75.21:0,75,1214	0/0:26,0:26:69.22:0,69,1129	0/0:20,0:20:51.13:0,51,802	0/0:26,0:26:66.16:0,66,1020	1/1:10,9:19:45.02:1001,45,0	1/1:16,0:15:29.19:417,29,0	0/0:13,0:13:30.10:0,30,463	0/0:22,0:22:63.12:0,63,952	0/0:13,0:13:33.11:0,33,547	0/0:24,0:24:63.20:0,63,1036	0/0:13,0:13:39.05:0,39,433	0/0:13,0:13:24.05:0,24,270	0/0:27,0:26:63.21:0,63,1028	0/0:31,0:30:63.17:0,63,989	0/0:25,0:25:66.22:0,66,1060	0/0:20,0:19:54.18:0,54,911
chr10	69408686	.	AAAAG	A	915.08	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=3.982;DP=663;FS=0.000;HRun=0;HaplotypeScore=193.1057;InbreedingCoeff=0.8517;MQ=57.77;MQ0=10;MQRankSum=-2.631;QD=14.76;ReadPosRankSum=-0.804;VQSLOD=3.0977;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:78.26:0,78,1468	0/0:15,0:15:36.12:0,36,823	0/1:36,0:15:2.18:2,0,302	0/0:34,0:22:25.85:0,26,948	0/0:31,0:31:66.22:0,66,1344	0/0:24,0:24:60.21:0,60,1385	0/0:25,0:25:60.19:0,60,1335	0/0:34,0:30:69.16:0,69,1491	0/0:26,0:26:63.20:0,63,1446	0/0:20,0:20:54.18:0,54,1123	0/0:11,0:11:27.09:0,27,502	0/0:23,0:23:48.16:0,48,1128	0/0:32,0:32:90.30:0,90,2054	0/0:24,0:24:63.22:0,63,1463	0/0:22,0:22:54.18:0,54,1247	0/0:26,0:26:54.18:0,54,1326	0/0:18,0:19:54.18:0,54,1051	0/0:15,0:15:38.71:0,39,714	0/0:18,0:18:48.12:0,48,885	0/0:25,0:25:63.19:0,63,1264	0/0:13,0:13:39.13:0,39,937	0/0:23,0:23:60.21:0,60,1454	1/1:2,11:13:33.11:570,33,0	1/1:6,7:13:30.06:465,30,0	0/0:25,0:25:51.17:0,51,1212	0/0:30,0:29:75.25:0,75,1600	0/0:28,0:28:69.21:0,69,1335	0/0:22,0:21:63.21:0,63,1347
chr10	69409762	.	G	GGGGGGT	5517.51	PASS	AB=1.000;AC=39;AF=0.696;AN=56;BaseQRankSum=4.558;DP=350;FS=10.989;HRun=0;HaplotypeScore=113.4100;InbreedingCoeff=0.2510;MQ=88.33;MQ0=1;MQRankSum=-8.784;QD=18.09;ReadPosRankSum=1.849;VQSLOD=3.9562;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:23:37.67:706,38,0	0/0:2,0:2:2.97:0,3,61	0/0:16,0:16:25.62:0,26,457	0/0:22,0:21:44.06:0,44,638	1/1:6,0:6:3.71:113,4,0	0/1:11,0:11:19.23:19,0,399	0/1:21,0:21:0.12:0,0,628	1/1:4,0:11:4.13:338,4,0	0/1:11,0:11:57.14:57,0,472	1/1:13,0:13:32.28:398,32,0	1/1:11,0:11:20.67:191,21,0	0/1:12,0:12:57.10:57,0,111	0/1:21,0:21:43.64:44,0,464	0/1:14,0:14:29.97:30,0,416	0/1:9,0:9:48.11:48,0,186	0/1:13,0:13:1.47:1,0,349	1/1:1,1:5:6.02:145,6,0	1/1:3,4:10:12.04:331,12,0	1/1:14,0:14:20.06:418,20,0	1/1:14,0:14:20.77:236,21,0	1/1:13,0:13:19.21:254,19,0	0/0:5,0:5:13.59:0,14,227	1/1:7,0:7:17.65:297,18,0	1/1:7,0:7:15.05:295,15,0	0/1:8,0:8:10.03:10,0,215	1/1:25,0:25:63.14:839,63,0	1/1:15,0:15:27.08:365,27,0	1/1:11,0:11:27:324,27,0
chr10	69409763	.	G	GGGGGT	7501.23	PASS	AB=1.000;AC=30;AF=0.536;AN=56;BaseQRankSum=0.168;DP=360;FS=0.505;HRun=0;HaplotypeScore=86.8898;InbreedingCoeff=0.7849;MQ=86.86;MQ0=1;MQRankSum=-8.728;QD=34.57;ReadPosRankSum=3.450;VQSLOD=4.5605;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,18:29:39.12:1052,39,0	0/0:2,0:2:3.01:0,3,59	0/0:15,0:15:22.51:0,23,438	0/0:22,0:21:32.92:0,33,577	1/1:3,3:7:6.87:188,7,0	0/0:11,0:11:24.01:0,24,423	0/0:21,0:21:43.24:0,43,664	0/1:11,0:11:68.66:132,0,69	0/0:11,0:11:26.55:0,27,499	1/1:14,0:14:33.06:643,33,0	1/1:12,0:12:22.51:339,23,0	0/0:12,0:12:12.30:0,12,140	0/1:21,0:21:13.78:14,0,437	0/0:14,0:14:31.79:0,32,427	0/0:9,0:9:13.66:0,14,215	0/0:13,0:13:30.12:0,30,372	1/1:5,0:5:6.02:90,6,0	1/1:8,1:9:12.04:254,12,0	1/1:16,0:16:20.11:631,20,0	1/1:14,0:14:21.04:372,21,0	1/1:13,0:13:15.32:350,15,0	0/0:5,0:5:13.60:0,14,228	1/1:0,5:7:18.06:441,18,0	1/1:1,7:8:15.05:433,15,0	0/0:8,0:8:16.89:0,17,242	1/1:22,1:23:63.15:1378,63,0	1/1:15,0:15:27.08:612,27,0	1/1:13,0:13:27.09:571,27,0
chr10	69409764	.	G	GGGGTT	9337.19	PASS	AB=1.000;AC=28;AF=0.500;AN=56;BaseQRankSum=-4.430;DP=385;FS=18.420;HRun=0;HaplotypeScore=92.8416;InbreedingCoeff=0.8189;MQ=84.75;MQ0=1;MQRankSum=-7.679;QD=42.06;ReadPosRankSum=3.109;VQSLOD=3.6910;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:30,0:30:38.95:771,39,0	0/0:2,0:2:5.99:0,6,83	0/0:15,0:15:37.01:0,37,539	0/0:22,0:21:26.91:0,27,643	0/1:7,0:7:11.47:128,0,11	0/0:11,0:11:30:0,30,518	0/0:20,0:20:60.02:0,60,884	0/1:10,0:10:99:110,0,167	0/0:11,0:11:32.99:0,33,579	1/1:7,9:17:32.94:847,33,0	1/1:2,9:13:29.68:483,30,0	0/0:12,0:12:29.86:0,30,306	0/0:21,0:21:25.75:0,26,569	0/0:14,0:14:36.05:0,36,557	0/0:9,0:9:23.95:0,24,328	0/0:13,0:13:36.05:0,36,527	1/1:6,0:6:6.01:82,6,0	1/1:7,0:7:11.99:172,12,0	1/1:11,9:21:13.86:1072,14,0	1/1:6,8:19:32.93:584,33,0	1/1:7,9:18:27.50:685,28,0	0/0:5,0:5:15.05:0,15,278	1/1:7,0:7:18.02:332,18,0	1/1:8,0:8:15.04:334,15,0	0/0:8,0:8:21.06:0,21,335	1/1:7,19:28:75.24:2016,75,0	1/1:3,12:16:30.09:876,30,0	1/1:3,11:15:30.09:844,30,0
chr10	69410618	.	GATT	G	944.72	PASS	AB=0.669;AC=14;AF=0.333;AN=42;BaseQRankSum=4.065;DP=276;FS=0.811;HRun=0;HaplotypeScore=41.2932;InbreedingCoeff=0.5759;MQ=71.42;MQ0=2;MQRankSum=0.337;QD=10.50;ReadPosRankSum=-1.311;VQSLOD=2.4967;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,3:10:9:101,9,0	1/1:5,1:7:9:100,9,0	./.	./.	1/1:7,2:9:3.01:40,3,0	0/0:2,0:13:30.10:0,30,393	0/0:9,0:9:9.03:0,9,174	1/1:19,9:28:27.01:297,27,0	0/1:2,1:3:30.91:31,0,74	0/0:12,0:12:18.06:0,18,348	./.	0/0:5,0:5:6.02:0,6,116	0/0:6,0:6:3.01:0,3,58	0/0:9,0:9:12.04:0,12,222	./.	1/1:1,2:3:3.01:40,3,0	0/1:6,14:20:0.22:403,0,0	0/0:27,0:27:48.16:0,48,907	0/0:21,0:20:12.03:0,12,199	0/0:12,0:12:6.02:0,6,106	./.	0/0:5,0:5:3.01:0,3,49	./.	./.	1/1:6,4:10:6.02:80,6,0	0/0:10,0:10:9.03:0,9,167	0/0:15,0:14:18.06:0,18,331	0/0:19,0:19:15.05:0,15,255
chr10	69410948	.	TAGTGGGGAC	T	9795.07	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=14.480;DP=516;FS=2.398;HRun=0;HaplotypeScore=165.5832;InbreedingCoeff=0.9658;MQ=96.88;MQ0=0;MQRankSum=-14.213;QD=51.02;ReadPosRankSum=-0.035;VQSLOD=4.5665;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:11,15:26:39.13:1097,39,0	0/0:4,0:4:9.03:0,9,423	0/0:28,0:28:60.21:0,60,2467	0/0:30,0:30:62.85:0,63,2435	1/1:3,5:8:12.04:348,12,0	0/0:22,0:22:54.19:0,54,2410	0/0:28,0:28:63.19:0,63,2513	0/0:34,0:34:75.26:0,75,3429	0/0:15,0:15:36.12:0,36,1655	1/1:3,17:20:48.14:1269,48,0	1/1:0,15:15:33.11:907,33,0	0/0:15,0:15:39.13:0,39,1834	0/0:19,0:19:42.14:0,42,1871	0/0:29,0:29:69.24:0,69,3121	0/0:17,0:17:39.13:0,39,1766	0/0:15,0:15:36.12:0,36,1611	0/0:33,0:33:78.27:0,78,3594	1/1:4,12:16:30.10:870,30,0	1/1:10,11:21:30.10:871,30,0	1/1:2,8:10:24.08:696,24,0	1/1:4,5:9:12.04:334,12,0	0/0:16,0:16:45.15:0,45,2003	1/1:3,7:10:18.06:483,18,0	1/1:8,8:16:8.97:261,9,0	0/0:19,0:19:51.18:0,51,2306	1/1:5,12:17:36.12:1004,36,0	1/1:4,15:19:48.16:1393,48,0	1/1:1,4:4:9.03:261,9,0
chr10	69411145	.	TG	T	4168.68	PASS	AB=0.892;AC=24;AF=0.429;AN=56;BaseQRankSum=6.543;DP=581;FS=3.765;HRun=10;HaplotypeScore=73.4605;InbreedingCoeff=0.6431;MQ=73.28;MQ0=0;MQRankSum=-1.006;QD=15.67;ReadPosRankSum=-0.232;VQSLOD=4.0133;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,102,1085	0/1:7,1:8:14.02:14,0,88	0/1:22,1:22:48.74:49,0,178	0/1:13,1:13:19.70:34,0,20	0/0:23,0:23:41.25:0,41,415	0/0:16,0:16:32.87:0,33,336	0/0:26,1:27:28.09:0,28,528	1/1:8,17:25:47.90:403,48,0	0/0:17,0:18:38.92:0,39,404	1/1:7,20:27:35.79:539,36,0	1/1:0,11:11:29.99:260,30,0	0/0:17,0:17:27.02:0,27,278	0/0:13,1:14:7.04:0,7,306	0/0:16,0:16:33.05:0,33,340	0/0:13,1:14:10.04:0,10,339	0/0:24,1:24:22.01:0,22,449	1/1:2,21:23:62.99:547,63,0	0/0:22,2:24:2.06:0,2,479	1/1:7,11:18:35.96:308,36,0	1/1:6,14:21:41.02:344,41,0	1/1:4,16:20:44.99:390,45,0	0/0:25,0:25:45.11:0,45,489	0/1:8,3:11:31.05:31,0,145	0/0:24,1:25:3.98:0,4,469	0/0:21,1:23:12.83:0,13,316	1/1:9,10:19:35.96:308,36,0	1/1:6,22:28:62.98:546,63,0	1/1:0,17:18:47.03:397,47,0
chr10	69412106	.	GA	G	2301.76	PASS	AB=0.735;AC=28;AF=0.500;AN=56;BaseQRankSum=4.150;DP=453;FS=7.708;HRun=13;HaplotypeScore=56.4644;InbreedingCoeff=0.2966;MQ=72.12;MQ0=5;MQRankSum=-0.863;QD=7.43;ReadPosRankSum=1.703;VQSLOD=1.9669;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:10,21:34:27.22:340,27,0	0/1:4,2:6:3.82:4,0,69	0/0:42,0:18:0.37:0,0,109	0/0:23,0:11:14.69:0,15,122	1/1:2,9:12:25.83:175,26,0	0/0:14,1:15:11.13:0,11,260	0/0:10,1:11:2.14:0,2,182	0/1:9,19:29:28.46:238,0,28	0/0:10,0:10:15.48:0,15,142	0/1:3,9:12:23.59:145,0,24	0/1:2,8:11:8.37:106,0,8	0/1:11,2:14:29.69:30,0,81	0/1:9,1:10:28.97:29,0,70	0/0:11,0:11:24.03:0,24,227	0/1:12,2:14:1.75:2,0,308	0/1:8,2:9:0.88:1,0,149	1/1:5,2:32:54.83:185,55,0	1/1:7,1:24:34.78:120,35,0	1/1:6,14:17:12.78:250,13,0	1/1:2,5:8:13.58:88,14,0	0/1:2,6:8:17.83:108,0,18	0/0:7,0:8:20.87:0,21,189	0/0:13,3:16:17.60:0,18,313	0/1:10,1:14:16.77:17,0,132	0/0:7,0:7:15.02:0,15,142	1/1:1,16:17:40.62:278,41,0	1/1:2,17:20:34.78:243,35,0	1/1:6,6:11:17.86:131,18,0
chr10	69412264	.	GGTTT	G	1657.30	PASS	AB=1.000;AC=23;AF=0.411;AN=56;BaseQRankSum=9.505;DP=335;FS=6.825;HRun=0;HaplotypeScore=72.1699;InbreedingCoeff=0.6614;MQ=66.17;MQ0=0;MQRankSum=-1.269;QD=9.69;ReadPosRankSum=-0.639;VQSLOD=1.3559;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:29.82:0,30,277	0/1:4,0:4:13:13,0,39	0/0:15,0:13:5.99:0,6,48	0/0:8,0:8:8.89:0,9,79	0/0:13,0:13:26.84:0,27,300	0/0:12,0:12:33.04:0,33,571	0/0:9,0:9:26.89:0,27,213	0/0:30,0:30:56.90:0,57,483	0/0:7,0:7:8.93:0,9,66	1/1:13,0:13:26.63:268,27,0	1/1:3,7:10:16.86:93,17,0	0/0:8,0:8:9:0,9,115	0/0:7,0:7:15.01:0,15,223	0/0:5,0:5:11.92:0,12,134	0/0:9,0:9:23.98:0,24,247	0/0:8,0:8:21.02:0,21,322	1/1:14,0:14:8.99:95,9,0	0/1:28,0:28:32.59:165,0,33	1/1:22,0:22:47.60:414,48,0	1/1:6,0:6:11.93:92,12,0	1/1:6,0:6:8.95:67,9,0	0/0:6,0:6:12.01:0,12,190	1/1:6,0:6:5.17:70,5,0	0/1:5,0:5:12.99:17,0,13	0/0:12,0:12:29.37:0,29,350	1/1:24,0:23:43.71:420,44,0	1/1:8,0:8:3.01:36,3,0	1/1:25,0:25:9.50:109,9,0
chr10	69412277	.	GTTTGTTTATTTATTTA	G	4665.50	PASS	AB=0.852;AC=21;AF=0.375;AN=56;BaseQRankSum=9.239;DP=304;FS=8.495;HRun=0;HaplotypeScore=117.9415;InbreedingCoeff=0.6579;MQ=59.27;MQ0=1;MQRankSum=0.695;QD=30.90;ReadPosRankSum=1.281;VQSLOD=3.4486;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:35.95:0,36,1168	0/1:3,0:3:13:13,0,39	0/0:9,0:7:5.99:0,6,48	0/0:4,0:4:8.89:0,9,79	0/0:12,0:12:32.86:0,33,1076	0/0:12,0:12:36.05:0,36,1741	0/0:9,0:9:26.90:0,27,238	0/0:28,0:26:72.03:0,72,892	0/0:4,0:4:8.93:0,9,66	1/1:0,13:13:33.07:989,33,0	1/1:9,0:8:16.86:93,17,0	0/0:5,0:5:9:0,9,284	0/0:7,0:7:18.02:0,18,656	0/0:5,0:5:11.94:0,12,338	0/0:8,0:8:23.99:0,24,456	0/0:8,0:8:21.02:0,21,782	0/0:1,0:14:9.03:0,9,135	0/1:15,0:30:99:137,0,753	1/1:1,19:20:56.63:903,57,0	1/1:6,0:6:11.93:92,12,0	1/1:4,0:4:8.95:67,9,0	0/0:4,0:4:12.01:0,12,490	1/1:1,0:7:6.05:240,6,0	0/1:1,0:5:12.97:101,0,13	0/0:11,0:11:33.04:0,33,1075	1/1:1,22:22:58.59:1377,59,0	1/1:1,6:7:3.01:140,3,0	1/1:0,24:24:12.04:514,12,0
chr10	69412281	.	G	GTTTATTTA	771.56	PASS	AC=8;AF=0.200;AN=40;BaseQRankSum=-2.684;DP=283;FS=4.342;HRun=0;HaplotypeScore=88.0353;InbreedingCoeff=0.5683;MQ=56.83;MQ0=1;MQRankSum=1.689;QD=10.29;ReadPosRankSum=-1.741;VQSLOD=1.4949;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:12,0:12:12.04:177,12,0	0/0:3,0:3:3:0,3,25	./.	./.	1/1:7,5:12:15.05:358,15,0	0/0:12,0:12:21.06:0,21,419	./.	1/1:27,0:24:2.92:17,3,0	./.	0/0:13,0:13:15.05:0,15,263	./.	0/0:4,0:4:3.01:0,3,70	0/0:7,0:7:12:0,12,195	./.	0/0:9,0:9:6:0,6,98	0/0:7,0:7:6.02:0,6,147	0/0:13,0:13:6.02:0,6,112	1/1:24,0:24:12.03:347,12,0	0/0:20,0:20:8.96:0,9,130	./.	./.	0/0:4,0:4:3.01:0,3,74	0/0:6,0:6:6.91:0,7,113	0/0:5,0:5:3.01:0,3,33	0/0:11,0:11:9.03:0,9,196	0/0:23,0:22:21.07:0,21,390	0/0:6,0:6:3.01:0,3,56	0/0:24,0:24:12.04:0,12,191
chr10	69412403	.	T	TC	9043.03	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=3.058;DP=460;FS=44.007;HRun=5;HaplotypeScore=56.5499;InbreedingCoeff=0.9979;MQ=67.45;MQ0=0;MQRankSum=-1.328;QD=34.78;ReadPosRankSum=-0.812;VQSLOD=1.6000;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,17:18:51.17:671,51,0	0/0:9,0:9:27.07:0,27,290	0/0:16,0:16:42.89:0,43,478	0/0:18,0:16:25.87:0,26,260	1/1:1,12:13:36.12:472,36,0	0/0:18,0:18:51.11:0,51,540	0/0:10,0:10:24.04:0,24,249	1/1:3,19:22:57.17:735,57,0	0/0:15,0:15:42.09:0,42,444	1/1:2,10:12:33.02:409,33,0	1/1:2,7:9:21.07:274,21,0	0/0:18,0:18:51.13:0,51,548	0/0:12,0:12:33.08:0,33,355	0/0:14,0:14:42.11:0,42,451	0/0:23,0:23:66.16:0,66,709	0/0:24,0:24:69.17:0,69,742	1/1:1,30:31:87.28:1145,87,0	1/1:2,20:22:60.15:770,60,0	1/1:4,14:18:42.14:553,42,0	1/1:0,10:11:27.09:355,27,0	1/1:0,15:15:42.14:553,42,0	0/0:8,0:8:24.06:0,24,258	1/1:3,8:11:24.08:312,24,0	1/1:0,11:11:30.10:395,30,0	0/0:15,0:15:39.10:0,39,419	1/1:0,23:23:63.20:825,63,0	1/1:2,28:30:81.26:1063,81,0	1/1:0,14:14:39.13:513,39,0
chr10	69412840	.	AGAAGTTCTGT	A	7547.30	PASS	AC=24;AF=0.444;AN=54;BaseQRankSum=13.467;DP=458;FS=10.039;HRun=0;HaplotypeScore=162.2294;InbreedingCoeff=0.8983;MQ=63.00;MQ0=0;MQRankSum=-12.227;QD=51.69;ReadPosRankSum=1.954;VQSLOD=4.1189;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,10:12:27.09:900,27,0	0/0:8,0:8:24.08:0,24,1281	0/0:10,0:10:23.53:0,24,1165	0/0:21,0:21:54.16:0,54,2366	1/1:2,6:8:3.01:56,3,0	0/0:26,0:26:75.26:0,75,3853	0/0:37,0:37:99:0,108,5537	0/0:14,0:14:42.14:0,42,2238	0/0:26,0:26:75.26:0,75,3875	1/1:4,7:11:21.07:700,21,0	./.	0/0:19,0:19:54.19:0,54,2784	0/0:20,0:20:57.18:0,57,2753	0/0:27,0:27:81.28:0,81,4136	0/0:18,0:18:54.19:0,54,2720	0/0:14,0:14:42.14:0,42,2178	0/0:47,0:46:99:0,138,7010	1/1:5,16:21:42.14:1360,42,0	1/1:5,6:10:18.06:590,18,0	1/1:1,2:3:3.01:98,3,0	1/1:9,10:19:6.48:200,6,0	0/0:12,0:12:36.12:0,36,1663	1/1:0,8:8:8.95:278,9,0	1/1:3,12:15:21.54:700,22,0	0/0:11,0:11:33.11:0,33,1756	1/1:3,12:15:33.11:1101,33,0	1/1:3,16:19:45.15:1464,45,0	1/1:3,1:4:3.01:100,3,0
chr10	69412935	.	TG	T	2423.91	PASS	AB=0.857;AC=27;AF=0.482;AN=56;BaseQRankSum=1.939;DP=462;FS=2.142;HRun=10;HaplotypeScore=66.8242;InbreedingCoeff=0.4285;MQ=64.89;MQ0=0;MQRankSum=-0.553;QD=9.18;ReadPosRankSum=3.645;VQSLOD=2.4322;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:39.04:0,39,422	0/0:10,0:10:15:0,15,141	0/1:7,2:9:20.04:20,0,27	0/0:11,0:11:8.47:0,8,64	0/1:9,3:13:65.49:65,0,70	0/0:19,0:20:29.98:0,30,320	0/1:24,3:27:10.01:10,0,347	1/1:4,2:6:5.96:52,6,0	0/0:26,1:27:19.01:0,19,398	1/1:4,8:12:29.99:260,30,0	1/1:3,2:6:9:78,9,0	0/0:20,2:22:22.02:0,22,451	0/0:16,1:17:7.05:0,7,306	0/1:16,1:17:19.70:20,0,248	0/0:17,1:18:4.03:0,4,273	0/0:9,0:9:12.03:0,12,133	0/0:17,0:23:38.25:0,38,279	1/1:6,20:26:50.97:443,51,0	1/1:13,6:18:26.96:230,27,0	1/1:4,4:8:8.98:78,9,0	1/1:9,21:30:35.97:310,36,0	0/1:17,3:20:45.21:45,0,227	0/1:10,3:13:57.10:57,0,111	0/0:16,0:16:26.32:0,26,274	0/1:7,1:8:20.04:20,0,27	1/1:2,13:15:38.97:335,39,0	1/1:3,16:20:46.10:395,46,0	1/1:2,13:15:23.99:208,24,0
chr10	69412992	.	CATAGATCTGGT	C	1899.60	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.022;DP=456;FS=0.851;HRun=0;HaplotypeScore=139.3576;InbreedingCoeff=0.8420;MQ=58.50;MQ0=1;MQRankSum=-5.970;QD=65.50;ReadPosRankSum=-0.223;VQSLOD=3.5929;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:87.30:0,87,4743	0/0:9,0:9:27.07:0,27,1198	0/0:13,0:2:6.02:0,6,338	0/0:25,0:18:51.14:0,51,2192	0/0:8,0:8:18.06:0,18,1048	0/0:19,0:19:57.20:0,57,2904	0/0:33,0:33:93.32:0,93,5087	1/1:3,10:9:21.03:606,21,0	0/0:21,0:21:63.20:0,63,3464	0/0:19,0:19:54.17:0,54,2978	0/0:2,0:2:6.02:0,6,350	0/0:11,0:11:5.10:0,5,1505	0/0:16,0:16:45.15:0,45,2618	0/0:16,0:16:48.16:0,48,2665	0/0:14,0:14:42.13:0,42,2205	0/0:13,0:13:39.13:0,39,2149	1/1:1,13:16:39.13:1414,39,0	0/0:26,0:26:75.26:0,75,4176	0/0:20,0:19:51.16:0,51,2401	0/0:10,0:10:27.09:0,27,1561	0/0:21,0:21:57.18:0,57,3126	0/0:8,0:8:21.07:0,21,1219	0/0:19,0:16:36.12:0,36,2062	0/0:13,0:13:33.09:0,33,1769	0/0:11,0:11:30.10:0,30,1733	0/0:17,0:17:45.15:0,45,2409	0/0:17,0:17:45.15:0,45,2499	0/0:13,0:13:27.09:0,27,1571
chr10	69413095	.	T	TC	12126.40	PASS	AC=30;AF=0.536;AN=56;BaseQRankSum=-10.393;DP=557;FS=1.032;HRun=2;HaplotypeScore=52.8626;InbreedingCoeff=0.9909;MQ=75.84;MQ0=0;MQRankSum=-2.508;QD=39.12;ReadPosRankSum=1.285;VQSLOD=5.2073;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,34:34:99:1484,99,0	0/0:4,0:4:9.03:0,9,117	0/0:20,0:20:51.15:0,51,646	0/0:24,0:24:41.79:0,42,727	1/1:0,17:17:42.14:626,42,0	0/0:29,0:29:84.27:0,84,1089	0/0:30,0:30:90.29:0,90,1169	1/1:0,23:21:57.18:824,57,0	0/0:13,0:13:36.10:0,36,453	1/1:0,16:15:45.14:646,45,0	1/1:1,13:13:30.10:449,30,0	0/0:29,0:29:87.28:0,87,1128	0/0:21,0:21:60.19:0,60,772	0/0:19,0:19:57.17:0,57,725	0/0:19,0:19:51.17:0,51,661	0/0:8,0:8:24.08:0,24,312	1/1:0,28:28:84.28:1258,84,0	1/1:0,22:22:60.20:899,60,0	1/1:2,24:25:62.78:896,63,0	1/1:0,11:11:30.10:450,30,0	1/1:2,20:22:51.17:764,51,0	0/0:11,0:11:33.11:0,33,428	1/1:0,16:16:30.10:449,30,0	1/1:0,36:36:99:1529,102,0	0/0:20,0:20:57.19:0,57,740	1/1:0,22:22:63.21:942,63,0	1/1:0,14:14:42.14:609,42,0	1/1:1,8:9:21.07:302,21,0
chr10	69413356	.	TGAGAGAGAGAGA	T	1700.58	PASS	AB=0.916;AC=13;AF=0.283;AN=46;BaseQRankSum=4.699;DP=485;FS=13.570;HRun=0;HaplotypeScore=142.1043;InbreedingCoeff=0.5944;MQ=41.09;MQ0=49;MQRankSum=-4.551;QD=12.60;ReadPosRankSum=0.234;VQSLOD=1.9925;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:27:2.85:0,3,45	0/0:10,0:10:7.72:0,8,122	./.	./.	0/0:23,0:21:4.97:0,5,27	0/0:26,0:22:24.65:0,25,883	0/0:16,0:14:9:0,9,380	1/1:13,0:13:1.80:28,2,0	0/0:23,0:23:36.03:0,36,1271	1/1:16,6:19:13.57:353,14,0	0/0:14,4:17:3.01:0,3,51	0/0:19,0:16:18.05:0,18,410	0/0:24,0:22:40.76:0,41,1150	0/0:17,0:17:21.07:0,21,732	0/0:23,0:22:21.03:0,21,549	0/0:17,0:16:18.06:0,18,511	0/1:16,0:15:1.52:191,0,2	0/1:18,0:15:83.54:84,0,178	1/1:6,4:9:9.04:321,9,0	0/1:14,0:13:0.14:0,0,0	./.	0/0:19,0:15:15.52:0,16,530	./.	0/0:19,0:15:5.98:0,6,138	0/0:23,0:21:21.07:0,21,683	1/1:9,0:15:17.99:373,18,0	1/1:9,7:15:14.91:501,15,0	./.
chr10	69413386	.	AGAGAGAGAGG	A	904.46	PASS	AB=0.995;AC=10;AF=0.192;AN=52;BaseQRankSum=7.744;DP=545;FS=21.647;HRun=0;HaplotypeScore=139.1809;InbreedingCoeff=0.0008;MQ=44.21;MQ0=56;MQRankSum=-4.418;QD=4.71;ReadPosRankSum=4.268;VQSLOD=1.1083;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:24,1:20:1.19:99,0,1	0/0:9,0:9:11.73:0,12,294	0/0:14,0:1:2.99:0,3,23	./.	1/1:5,27:30:2.93:18,3,0	0/0:20,0:19:43.56:0,44,988	0/0:13,0:11:14.96:0,15,378	0/1:16,0:11:6.84:7,0,164	0/0:24,0:24:50.02:0,50,1468	0/1:22,0:18:99:182,0,204	0/0:12,0:10:10.94:0,11,69	0/0:26,0:23:41.68:0,42,661	0/0:28,0:26:29.57:0,30,1068	0/0:22,0:21:44.97:0,45,914	0/0:27,0:26:49.21:0,49,851	0/0:21,0:20:38.94:0,39,836	0/1:18,0:16:70.03:70,0,114	0/1:23,0:18:20.76:21,0,259	0/1:14,0:10:99:154,0,104	0/0:16,0:14:23.66:0,24,185	0/0:13,0:10:20.93:0,21,166	0/0:20,0:18:38.76:0,39,675	0/0:13,0:12:5.98:0,6,47	0/0:23,0:20:18.31:0,18,213	0/0:27,0:25:41.89:0,42,840	0/1:19,0:19:99:214,0,178	0/1:22,0:20:99:275,0,110	./.
chr10	69414887	.	TGGGAG	T	163.75	PASS	AB=0.556;AC=9;AF=0.250;AN=36;BaseQRankSum=-1.580;DP=351;FS=0.000;HRun=0;HaplotypeScore=65.0365;InbreedingCoeff=0.7638;MQ=79.05;MQ0=57;MQRankSum=-0.457;QD=5.85;ReadPosRankSum=-3.972;VQSLOD=0.4858;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:10,0:4:3.01:47,3,0	0/0:7,0:7:21.07:0,21,699	0/0:23,0:21:63.22:0,63,1981	0/0:13,0:11:26.92:0,27,729	./.	0/0:28,0:25:75.26:0,75,2433	0/0:24,0:22:51.17:0,51,1608	1/1:5,0:3:9.02:133,9,0	0/0:25,0:25:72.25:0,72,2211	./.	./.	0/0:18,0:16:48.16:0,48,1535	0/0:30,0:27:75.26:0,75,2402	0/0:21,0:19:57.20:0,57,1895	0/0:37,0:35:99:0,102,3274	0/0:21,0:19:54.19:0,54,1797	./.	./.	./.	0/1:1,4:4:0:0,0,0	./.	0/0:24,0:22:63.22:0,63,2075	./.	1/1:3,0:3:3.01:49,3,0	0/0:18,0:18:48.16:0,48,1597	1/1:5,0:2:3.01:50,3,0	./.	./.
chr10	69418804	.	C	CAACG	927.90	PASS	AB=0.879;AC=13;AF=0.342;AN=38;BaseQRankSum=-5.420;DP=376;FS=4.751;HRun=0;HaplotypeScore=64.6066;InbreedingCoeff=0.5100;MQ=53.52;MQ0=4;MQRankSum=-2.050;QD=9.57;ReadPosRankSum=0.509;VQSLOD=2.1288;culprit=QD;set=input10	GT:AD:DP:GQ:PL	./.	0/0:11,0:10:27.09:0,27,565	0/0:25,0:22:66.23:0,66,1326	0/0:28,0:27:78.25:0,78,1486	./.	0/0:21,0:21:51.17:0,51,1002	0/1:26,2:31:89.10:89,0,1457	./.	0/0:19,0:23:18.61:0,19,826	./.	./.	0/0:26,0:26:69.23:0,69,1385	0/0:23,0:22:54.18:0,54,1075	0/0:16,0:16:45.15:0,45,876	0/0:37,0:36:96.32:0,96,1857	0/0:29,0:29:81.28:0,81,1639	0/1:15,2:17:50.64:51,0,655	1/1:0,1:1:3.01:87,3,0	1/1:0,0:5:15.03:265,15,0	./.	1/1:0,7:7:9.03:260,9,0	0/1:26,3:29:99:107,0,1098	./.	./.	0/0:17,0:17:33.11:0,33,664	./.	1/1:0,3:3:6.02:173,6,0	1/1:1,0:1:3.01:39,3,0
chr10	69420035	.	C	CT	6040.73	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=1.617;DP=666;FS=24.967;HRun=6;HaplotypeScore=74.5568;InbreedingCoeff=0.9884;MQ=86.94;MQ0=0;MQRankSum=-7.994;QD=32.30;ReadPosRankSum=1.045;VQSLOD=3.0212;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:93.19:0,93,941	0/0:7,0:7:21.05:0,21,214	0/0:32,0:32:86.19:0,86,844	0/0:18,0:18:39.03:0,39,381	0/0:24,0:24:63.08:0,63,624	0/0:28,0:28:78.16:0,78,788	0/0:32,0:32:96.22:0,96,979	0/0:34,0:34:96.20:0,96,974	0/0:24,0:24:66.13:0,66,662	1/1:2,25:27:75.20:905,75,0	1/1:2,14:16:42.09:510,42,0	0/0:24,0:24:72.15:0,72,728	0/0:27,0:27:66:0,66,652	0/0:25,0:25:72.15:0,72,727	0/0:26,0:26:75.17:0,75,765	0/0:23,0:23:66.14:0,66,668	0/0:21,0:21:54.12:0,54,551	0/0:16,0:16:39.08:0,39,398	1/1:3,17:20:51.16:630,51,0	1/1:2,31:33:90.25:1114,90,0	1/1:3,29:32:75.24:944,75,0	0/0:23,0:23:63.11:0,63,630	0/0:21,0:21:50.53:0,51,471	0/0:22,0:22:63.10:0,63,632	0/0:18,0:18:47.84:0,48,471	1/1:0,24:24:69.18:839,69,0	1/1:3,18:21:54.17:679,54,0	1/1:1,13:14:8.52:421,9,0
chr10	69420798	.	A	AGT	3205.35	PASS	AB=0.921;AC=18;AF=0.321;AN=56;BaseQRankSum=11.908;DP=851;FS=10.891;HRun=0;HaplotypeScore=217.7925;InbreedingCoeff=0.2373;MQ=59.33;MQ0=9;MQRankSum=-10.910;QD=7.61;ReadPosRankSum=-1.024;VQSLOD=1.5658;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:27,0:36:3.85:38,0,4	0/0:10,0:10:27.07:0,27,304	0/0:50,0:27:13.15:0,13,210	0/1:66,0:30:9.05:9,0,151	1/1:16,0:23:10.60:108,11,0	0/0:28,0:29:44.24:0,44,652	0/0:25,0:25:54.14:0,54,624	0/1:37,0:36:56.48:56,0,139	0/0:37,0:39:89.89:0,90,985	0/1:31,7:36:77.89:599,0,78	0/1:20,2:22:6.06:365,0,6	0/0:32,0:32:45.08:0,45,495	0/0:33,0:36:75.02:0,75,971	0/0:25,0:25:33.22:0,33,451	0/0:33,0:37:69.64:0,70,817	0/0:32,0:34:78.92:0,79,884	0/1:24,0:23:38.81:76,0,39	1/1:17,4:21:5.02:245,5,0	0/1:21,3:22:73.08:230,0,73	1/1:11,3:12:9.48:139,9,0	0/1:25,8:32:3.24:195,0,3	0/0:33,0:37:89.72:0,90,962	0/0:19,0:17:18.03:0,18,189	0/0:26,0:25:14.96:0,15,154	0/0:29,0:30:78.01:0,78,855	1/1:28,11:33:65.77:844,66,0	0/1:22,2:24:7.86:242,0,8	0/1:12,3:15:77.40:234,0,77
chr10	69420825	.	GTC	G	220.13	PASS	AB=0.973;AC=11;AF=0.196;AN=56;BaseQRankSum=9.063;DP=862;FS=1.679;HRun=0;HaplotypeScore=222.6655;InbreedingCoeff=-0.0409;MQ=52.48;MQ0=9;MQRankSum=-7.265;QD=1.00;ReadPosRankSum=-1.867;VQSLOD=2.1050;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:14.85:0,15,213	0/0:10,0:10:30.10:0,30,569	0/0:62,1:27:45.32:0,45,909	0/0:79,0:32:63.96:0,64,980	0/0:35,0:30:48.43:0,48,375	0/0:27,0:27:72.23:0,72,1321	0/0:31,0:29:60.90:0,61,1266	0/0:37,0:34:21.89:0,22,714	0/0:36,0:36:99:0,108,1935	0/1:37,0:33:94.20:94,0,183	0/1:25,0:25:13.59:14,0,114	0/0:30,0:30:75.23:0,75,1442	0/0:37,0:37:99:0,110,1970	0/0:28,0:28:66.33:0,66,1417	0/0:41,0:41:93.69:0,94,1956	0/0:39,0:38:99:0,111,2011	0/1:15,7:21:99:136,0,187	0/1:16,0:16:22.04:22,0,173	0/1:21,0:18:20.37:20,0,248	0/1:17,0:15:1.73:2,0,170	0/1:25,0:22:17.75:18,0,96	0/0:41,0:41:99:0,117,2050	0/1:13,0:11:16.98:17,0,18	0/0:22,0:21:5.40:0,5,70	0/0:32,0:32:93.22:0,93,1677	0/1:36,0:29:8.05:8,0,244	0/0:19,0:19:5.39:0,5,181	1/1:9,0:9:6.88:32,7,0
chr10	69420831	.	T	TTCTC	5576.85	PASS	AB=0.777;AC=19;AF=0.352;AN=54;BaseQRankSum=1.331;DP=853;FS=70.082;HRun=0;HaplotypeScore=231.6909;InbreedingCoeff=0.4818;MQ=51.67;MQ0=8;MQRankSum=-5.785;QD=17.59;ReadPosRankSum=-6.228;VQSLOD=1.6131;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:21,7:29:13.85:240,14,0	0/0:11,0:11:27.09:0,27,462	0/0:66,0:24:41.08:0,41,592	0/0:75,0:32:47.76:0,48,762	1/1:24,9:30:26.85:422,27,0	0/0:24,0:24:60.16:0,60,985	0/0:28,0:27:51.45:0,51,1014	1/1:12,21:34:68.22:1442,68,0	0/0:36,0:36:96.30:0,96,1598	0/1:35,11:40:99:1211,0,138	1/1:16,7:23:5.67:107,6,0	0/0:31,0:31:71.99:0,72,1217	0/0:43,0:43:99:0,111,1862	0/0:28,0:28:72.19:0,72,1207	0/0:43,0:43:99:0,123,2017	0/0:39,0:38:84.29:0,84,1449	1/1:12,8:19:10.91:256,11,0	0/1:12,5:17:44.67:463,0,45	0/1:18,2:20:99:332,0,112	0/0:7,12:17:0.47:0,0,1	1/1:20,3:20:6.02:124,6,0	0/0:41,0:41:99:0,102,1697	./.	1/1:11,8:18:3.01:50,3,0	0/0:31,0:31:78.26:0,78,1310	0/1:20,10:25:75.33:790,0,75	0/1:9,8:20:99:140,0,126	0/0:8,0:8:4.91:0,5,49
chr10	69420907	.	CTG	C	458.62	PASS	AB=0.771;AC=3;AF=0.054;AN=56;BaseQRankSum=4.751;DP=919;FS=0.762;HRun=0;HaplotypeScore=161.8875;InbreedingCoeff=0.4347;MQ=49.64;MQ0=44;MQRankSum=-4.550;QD=9.17;ReadPosRankSum=-4.121;VQSLOD=2.4219;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:43:13.55:0,14,129	0/0:16,0:16:48.16:0,48,829	0/0:34,0:8:18.04:0,18,260	0/0:41,0:15:19.99:0,20,192	0/0:28,0:28:15.88:0,16,196	0/0:16,0:16:39.13:0,39,676	0/0:47,0:44:99:0,102,1696	0/1:19,8:17:9.99:207,0,10	0/0:38,0:37:99:0,102,1647	0/0:58,0:47:42.87:0,43,834	0/0:14,0:12:18.03:0,18,180	0/0:39,0:39:93.11:0,93,1711	0/0:36,0:36:89.98:0,90,1386	0/0:37,0:37:99:0,99,1679	0/0:49,0:48:99:0,119,1972	0/0:47,0:45:99:0,116,1917	1/1:8,15:22:1.25:341,1,0	0/0:23,0:21:23.28:0,23,383	0/0:37,0:24:20.82:0,21,413	0/0:25,0:18:30.07:0,30,321	0/0:67,0:59:59.65:0,60,611	0/0:28,0:28:57.16:0,57,895	0/0:20,0:14:24.05:0,24,257	0/0:41,1:39:29.74:0,30,306	0/0:30,0:30:75.24:0,75,1205	0/0:30,0:26:56.92:0,57,601	0/0:15,0:15:20.42:0,20,249	0/0:5,0:4:12.03:0,12,125
chr10	69420963	.	GTCTGTGTGTGTC	G	226.46	PASS	AB=1.000;AC=6;AF=0.107;AN=56;BaseQRankSum=5.678;DP=829;FS=6.246;HRun=0;HaplotypeScore=287.6955;InbreedingCoeff=0.6746;MQ=46.75;MQ0=80;MQRankSum=-5.232;QD=2.76;ReadPosRankSum=-2.130;VQSLOD=0.9336;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:29:19.06:0,19,148	0/0:17,0:17:20.82:0,21,304	0/0:3,0:1:1.82:0,2,5	0/1:7,0:2:0.83:1,0,25	0/0:31,0:25:17.90:0,18,136	0/0:29,0:27:45.22:0,45,723	0/0:47,0:40:80.88:0,81,707	1/1:25,5:4:11.92:89,12,0	0/0:32,0:31:53.46:0,53,1125	0/0:49,0:40:49.27:0,49,595	0/1:13,0:11:2.54:3,0,19	0/0:40,0:40:70.36:0,70,985	0/0:35,0:35:75.17:0,75,1091	0/0:27,0:27:59.37:0,59,774	0/0:38,0:35:65.10:0,65,1098	0/0:43,0:43:87.07:0,87,1420	1/1:32,0:30:32.33:252,32,0	0/0:20,0:18:14.13:0,14,256	0/0:17,0:9:17.86:0,18,135	0/0:33,0:26:40.10:0,40,316	0/0:73,0:60:43.39:0,43,456	0/0:32,0:30:57.59:0,58,667	0/0:20,0:15:20.97:0,21,173	0/0:35,0:33:19.98:0,20,160	0/0:25,0:24:56.84:0,57,871	0/0:38,0:29:53.25:0,53,413	0/0:19,0:19:13.23:0,13,119	0/0:9,0:8:20.46:0,20,154
chr10	69421011	.	CTG	C	5879.85	PASS	AC=26;AF=0.481;AN=54;BaseQRankSum=16.697;DP=969;FS=2.429;HRun=0;HaplotypeScore=159.8831;InbreedingCoeff=0.9288;MQ=45.96;MQ0=70;MQRankSum=-2.286;QD=13.55;ReadPosRankSum=8.040;VQSLOD=4.3528;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:9,24:28:30.09:381,30,0	0/0:9,0:9:20.10:0,20,294	./.	0/0:39,0:5:3.01:0,3,42	1/1:20,14:25:18.06:228,18,0	0/0:31,1:30:1.22:0,1,870	0/0:46,0:42:92.75:0,93,1418	0/0:52,0:23:51.07:0,51,763	0/0:30,0:30:65.75:0,66,1006	1/1:24,28:36:72.21:895,72,0	1/1:4,11:12:12.04:153,12,0	0/0:36,0:36:93.02:0,93,1421	0/0:29,0:29:72.23:0,72,1144	0/0:39,0:38:96.04:0,96,1515	0/0:37,0:37:99:0,99,1636	0/0:38,1:38:87.26:0,87,1363	0/0:45,0:41:78.99:0,79,1248	1/1:11,13:22:30.03:483,30,0	1/1:10,16:11:11.43:305,11,0	1/1:11,24:27:50.52:647,51,0	1/1:40,42:77:27.45:925,27,0	0/0:43,0:41:99:0,105,1643	1/1:6,16:16:30.07:364,30,0	1/1:13,27:38:36.01:419,36,0	0/0:31,0:31:87.24:0,87,1358	1/1:20,20:29:16.52:550,17,0	1/1:7,11:17:18.06:223,18,0	1/1:2,11:11:24.07:305,24,0
chr10	69421059	.	CTG	C	232.59	PASS	AB=0.881;AC=4;AF=0.077;AN=52;BaseQRankSum=4.274;DP=954;FS=21.168;HRun=0;HaplotypeScore=167.8215;InbreedingCoeff=0.2468;MQ=44.03;MQ0=122;MQRankSum=-4.588;QD=2.02;ReadPosRankSum=-2.235;VQSLOD=0.3452;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:31:24.08:0,24,401	0/0:8,0:8:24.07:0,24,376	./.	./.	0/0:19,0:11:11.92:0,12,170	0/0:23,0:22:48.16:0,48,782	0/0:40,0:37:62.84:0,63,945	0/1:58,0:12:22.79:23,0,142	0/0:37,0:37:52.47:0,52,1262	0/0:58,2:38:41.40:0,41,1040	0/0:18,0:14:18.06:0,18,292	0/0:34,0:34:84.26:0,84,1336	0/0:28,1:28:31.09:0,31,1055	0/0:48,0:48:99:0,102,1632	0/0:42,0:42:93.23:0,93,1419	0/0:40,1:40:26.09:0,26,1299	0/1:31,14:42:99:297,0,526	0/0:25,0:22:24.86:0,25,460	0/0:29,0:11:24.06:0,24,375	0/0:31,0:20:15.02:0,15,188	0/0:65,1:53:29.26:0,29,456	0/0:53,0:52:99:0,132,2102	0/0:20,1:16:21.06:0,21,323	0/0:29,0:25:21.07:0,21,346	0/0:28,0:28:81.24:0,81,1280	0/0:39,0:25:48.09:0,48,668	1/1:12,0:11:2.04:6,2,0	0/0:13,0:11:15.05:0,15,250
chr10	69421105	.	G	GTGTC	670.38	PASS	AB=0.962;AC=12;AF=0.214;AN=56;BaseQRankSum=10.937;DP=865;FS=3.984;HRun=0;HaplotypeScore=185.8773;InbreedingCoeff=-0.1007;MQ=43.76;MQ0=55;MQRankSum=-5.295;QD=2.39;ReadPosRankSum=-2.675;VQSLOD=2.2575;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:33,1:25:11.37:11,0,163	0/0:10,0:10:29.81:0,30,453	0/0:41,0:6:8.92:0,9,113	0/0:79,0:15:15.82:0,16,250	0/0:8,0:7:3.01:0,3,31	0/0:22,0:22:54.03:0,54,794	0/0:42,0:41:99:0,99,1561	0/0:81,0:44:10.39:0,10,581	0/0:26,0:26:57.09:0,57,1080	0/1:33,0:28:99:269,0,198	0/1:10,0:9:22.31:22,0,78	0/0:40,0:40:93.17:0,93,1474	0/0:25,0:25:63.02:0,63,1025	0/0:41,0:41:96.23:0,96,1633	0/0:33,0:33:69.17:0,69,1124	0/0:40,0:39:40.84:0,41,1295	0/1:29,0:28:58.32:58,0,381	0/1:16,0:16:63.59:64,0,75	0/1:27,1:12:84.77:85,0,169	0/1:22,1:19:27.88:28,0,52	0/1:43,1:35:62.27:62,0,74	0/0:50,0:49:99:0,132,2119	0/0:17,0:16:21.05:0,21,245	0/1:14,0:10:14.84:15,0,53	0/0:27,0:27:40.68:0,41,1184	0/1:25,0:20:81.14:81,0,140	1/1:12,3:16:13.20:128,13,0	0/0:3,0:3:3.01:0,3,37
chr10	69421111	.	CTG	C	637.70	PASS	AB=0.880;AC=8;AF=0.143;AN=56;BaseQRankSum=7.246;DP=819;FS=4.856;HRun=0;HaplotypeScore=158.4367;InbreedingCoeff=-0.1984;MQ=43.91;MQ0=48;MQRankSum=-1.662;QD=2.55;ReadPosRankSum=-5.993;VQSLOD=0.3746;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:27:2.34:0,2,129	0/0:10,0:10:29.58:0,30,463	0/0:37,0:6:8.42:0,8,116	0/0:75,0:15:24.18:0,24,338	0/0:11,0:9:3.01:0,3,44	0/0:22,0:22:53.70:0,54,815	0/0:43,0:42:99:0,102,1664	0/1:58,11:41:9.85:10,0,1053	0/0:25,0:25:65.88:0,66,1091	0/1:30,3:24:99:137,0,287	0/0:9,1:9:8.70:0,9,101	0/0:36,0:36:83.02:0,83,1303	0/0:22,0:22:54.92:0,55,899	0/0:41,0:41:99:0,108,1769	0/0:30,0:30:62.88:0,63,1036	0/0:39,0:38:83.18:0,83,1432	0/0:29,0:28:56.86:0,57,873	0/1:10,5:14:93.72:94,0,97	0/1:30,0:13:88.85:89,0,213	0/1:20,3:18:32.26:66,0,32	0/1:33,6:33:61.38:188,0,61	0/0:43,0:42:99:0,114,1947	0/0:15,0:14:12.01:0,12,138	0/0:10,0:7:9.03:0,9,129	0/0:30,0:30:89.97:0,90,1442	0/1:24,2:19:95.18:95,0,270	0/1:12,3:15:62.86:91,0,63	0/0:3,0:3:2.94:0,3,18
chr10	69421117	.	C	CTG	741.84	PASS	AB=0.912;AC=12;AF=0.222;AN=54;BaseQRankSum=5.987;DP=795;FS=17.210;HRun=0;HaplotypeScore=153.2249;InbreedingCoeff=-0.0066;MQ=43.84;MQ0=48;MQRankSum=-4.349;QD=2.84;ReadPosRankSum=-0.840;VQSLOD=1.7009;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,9:21:14.93:0,15,113	0/0:10,0:10:29.84:0,30,398	0/0:29,0:5:10.27:0,10,114	0/0:73,0:16:14.54:0,15,180	./.	0/0:21,0:21:51.17:0,51,730	0/0:43,0:43:99:0,102,1439	0/1:59,0:33:80.50:81,0,646	0/0:26,0:26:72.23:0,72,1000	0/1:35,6:29:99:338,0,143	1/1:8,1:8:3.01:39,3,0	0/0:32,0:32:75.23:0,75,1047	0/0:21,0:21:54.05:0,54,729	0/0:41,0:41:99:0,99,1372	0/0:33,0:33:63.18:0,63,862	0/0:39,0:38:86.09:0,86,1213	0/0:31,0:29:46.52:0,47,618	0/1:13,1:13:38.20:38,0,69	0/1:27,0:11:93.47:93,0,100	0/1:18,6:18:44.37:44,0,48	0/1:37,4:36:19.45:19,0,231	0/0:39,0:38:99:0,114,1628	0/0:9,6:13:3.01:0,3,33	1/1:8,2:7:3.01:55,3,0	0/0:30,0:30:87.29:0,87,1223	0/1:20,4:18:99:138,0,133	0/1:11,1:12:41.65:42,0,51	0/0:6,0:5:3.01:0,3,37
chr10	69421119	.	GTC	G	255.04	PASS	AB=0.937;AC=12;AF=0.214;AN=56;BaseQRankSum=5.728;DP=788;FS=12.876;HRun=0;HaplotypeScore=149.2043;InbreedingCoeff=0.0864;MQ=43.54;MQ0=52;MQRankSum=-3.341;QD=1.11;ReadPosRankSum=-2.660;VQSLOD=1.4570;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,2:20:18.05:0,18,297	0/0:10,0:10:30.10:0,30,569	0/0:30,1:6:12.50:0,13,174	0/0:71,1:18:23.20:0,23,325	0/1:11,3:11:0:0,0,0	0/0:21,0:21:51.17:0,51,969	0/0:43,0:43:99:0,108,1988	0/1:59,0:32:16.24:16,0,1016	0/0:26,0:26:72.25:0,72,1357	0/1:34,4:27:99:160,0,542	1/1:8,1:8:3.01:39,3,0	0/0:32,0:32:75.24:0,75,1391	0/0:20,0:20:54.10:0,54,989	0/0:39,0:39:99:0,102,1812	0/0:33,0:33:63.20:0,63,1134	0/0:39,1:39:95.31:0,95,1703	0/0:31,0:29:51.03:0,51,918	0/1:14,0:13:15.37:15,0,206	0/1:26,2:11:27.09:27,0,256	0/1:22,2:18:15.83:16,0,138	0/0:38,3:36:13.55:0,14,605	0/0:39,0:38:99:0,114,2162	0/0:12,1:11:3.01:0,3,58	1/1:9,1:6:3.01:32,3,0	0/0:30,0:30:90.27:0,90,1660	0/1:19,2:15:80.80:81,0,278	0/1:12,0:12:7.80:8,0,154	0/0:4,2:5:3.01:0,3,55
chr10	69421127	.	G	GTC	1345.17	PASS	AB=0.916;AC=17;AF=0.340;AN=50;BaseQRankSum=12.442;DP=817;FS=1.019;HRun=0;HaplotypeScore=152.1253;InbreedingCoeff=0.4470;MQ=44.88;MQ0=54;MQRankSum=-3.594;QD=4.34;ReadPosRankSum=-1.160;VQSLOD=2.7531;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:24,7:20:26.06:299,26,0	0/0:10,0:10:27.09:0,27,337	0/0:34,0:9:18.84:0,19,178	0/0:72,0:16:17.40:0,17,222	./.	0/0:22,0:22:51.10:0,51,606	0/0:41,0:41:82.85:0,83,985	1/1:53,0:25:20.77:168,21,0	0/0:31,0:31:54.08:0,54,614	0/1:38,1:31:99:189,0,128	./.	0/0:35,0:34:72.23:0,72,898	0/0:21,0:21:48.12:0,48,570	0/0:38,0:38:63.18:0,63,773	0/0:40,0:40:72.12:0,72,806	0/0:42,0:42:92.97:0,93,1071	1/1:30,0:28:28.44:175,28,0	1/1:15,0:13:0.45:109,0,0	1/1:19,0:8:10.11:100,10,0	0/1:24,1:22:25.03:25,0,63	0/1:43,1:39:92.02:148,0,92	0/0:40,0:39:87.26:0,87,1073	0/0:14,0:12:1.25:0,1,3	./.	0/0:32,0:32:84.27:0,84,1048	0/1:17,1:15:31.93:123,0,32	1/1:9,2:15:3.19:170,3,0	0/1:7,0:6:10.72:11,0,19
chr10	69421143	.	GTC	G	826.16	PASS	AB=0.852;AC=7;AF=0.130;AN=54;BaseQRankSum=2.781;DP=827;FS=2.219;HRun=0;HaplotypeScore=135.0143;InbreedingCoeff=0.8155;MQ=46.70;MQ0=71;MQRankSum=1.213;QD=6.77;ReadPosRankSum=-4.210;VQSLOD=2.7855;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:29,6:28:41.96:403,42,0	0/0:12,0:11:26.83:0,27,406	0/0:40,1:10:16.49:0,16,184	0/0:82,0:19:21.30:0,21,243	0/1:19,4:16:0:0,0,0	0/0:21,0:21:54.17:0,54,852	0/0:39,0:38:34.63:0,35,904	1/1:26,4:10:19.78:190,20,0	0/0:29,0:29:60.19:0,60,964	0/0:44,0:29:75.72:0,76,1205	0/0:10,0:9:3.01:0,3,45	0/0:38,0:37:75.23:0,75,1163	0/0:24,0:24:60.16:0,60,900	0/0:30,0:30:66.15:0,66,1023	0/0:41,0:41:78.19:0,78,1298	0/0:42,0:41:83.94:0,84,1272	1/1:33,0:31:18.45:371,18,0	0/0:15,0:11:24.08:0,24,385	0/0:21,0:9:27.09:0,27,443	0/0:22,0:18:18.53:0,19,301	0/0:47,0:42:60.20:0,60,948	0/0:36,0:35:96.23:0,96,1410	0/0:13,0:9:3.01:0,3,50	./.	0/0:38,0:38:87.26:0,87,1385	0/0:27,0:18:48.16:0,48,772	0/0:19,0:18:29.93:0,30,454	0/0:6,0:4:7.27:0,7,90
chr10	69421209	.	CTG	C	1549.56	PASS	AB=0.920;AC=17;AF=0.340;AN=50;BaseQRankSum=3.891;DP=936;FS=12.339;HRun=0;HaplotypeScore=115.2119;InbreedingCoeff=0.7850;MQ=43.71;MQ0=137;MQRankSum=-8.098;QD=4.70;ReadPosRankSum=-2.608;VQSLOD=1.6770;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:51,1:45:31.27:0,31,914	0/0:19,2:20:47.82:0,48,755	0/0:11,0:3:8.89:0,9,81	0/0:31,0:1:2.98:0,3,22	0/0:38,1:30:29.72:0,30,468	0/0:24,1:24:23:0,23,814	0/0:37,2:35:74.89:0,75,1048	0/1:73,7:39:94.62:95,0,874	0/0:46,0:46:93.27:0,93,1690	1/1:33,12:32:23.55:627,24,0	1/1:12,6:12:3.01:37,3,0	0/0:38,1:37:80.89:0,81,1216	0/0:25,2:27:25.49:0,25,885	0/0:47,0:47:99:0,108,1886	0/0:50,0:50:99:0,120,1729	0/0:38,0:38:68.27:0,68,1290	0/0:49,3:46:13.42:0,13,1144	1/1:17,5:14:29.67:280,30,0	1/1:20,5:6:8.86:112,9,0	1/1:16,7:16:3:37,3,0	1/1:48,18:39:14.99:155,15,0	0/0:37,0:37:85.78:0,86,1256	./.	./.	0/0:28,0:28:69.13:0,69,1007	1/1:21,5:13:20.96:240,21,0	1/1:12,7:13:12.04:150,12,0	./.
chr10	69421331	.	CTG	C	792.60	PASS	AB=0.910;AC=13;AF=0.250;AN=52;BaseQRankSum=2.099;DP=1105;FS=2.031;HRun=0;HaplotypeScore=142.8331;InbreedingCoeff=-0.0176;MQ=40.82;MQ0=168;MQRankSum=-2.475;QD=1.72;ReadPosRankSum=-1.729;VQSLOD=2.5440;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:31,3:18:3.01:38,3,0	0/0:16,0:16:21.06:0,21,324	./.	./.	1/1:26,2:17:6.02:72,6,0	0/0:27,1:27:63.17:0,63,967	0/0:45,0:36:78.17:0,78,1182	0/0:51,0:11:12:0,12,107	0/0:40,0:40:87.28:0,87,1406	0/1:68,5:40:99:140,0,390	0/0:21,0:14:3:0,3,28	0/0:49,1:48:99:0,108,1637	0/0:33,0:33:85.38:0,85,1315	0/0:44,1:44:67.25:0,67,1532	0/0:65,0:62:99:0,132,2081	0/0:40,2:40:46:0,46,1222	0/0:44,1:32:6.54:0,7,223	0/1:24,6:17:66.31:187,0,66	0/1:21,3:10:86.72:87,0,122	0/1:44,4:32:47.59:48,0,70	0/1:77,3:50:99:133,0,335	0/0:45,0:44:90.27:0,90,1438	0/0:21,2:14:0:0,0,0	0/1:50,2:39:80.73:81,0,130	0/0:31,0:30:68.93:0,69,960	0/1:46,1:27:95.72:96,0,377	0/1:36,2:26:15.19:15,0,136	0/1:4,2:4:24.49:44,0,24
chr10	69421347	.	G	GC	126.91	PASS	AB=0.915;AC=4;AF=0.071;AN=56;BaseQRankSum=5.549;DP=1038;FS=5.034;HRun=0;HaplotypeScore=133.6553;InbreedingCoeff=0.0812;MQ=41.98;MQ0=144;MQRankSum=-4.309;QD=0.88;ReadPosRankSum=0.398;VQSLOD=2.2648;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:16:3.48:0,3,41	0/0:15,0:15:27.09:0,27,378	0/0:23,0:2:6.02:0,6,77	0/0:36,0:2:3.01:0,3,39	0/0:11,0:8:6.02:0,6,75	0/0:32,0:32:62.65:0,63,992	0/0:46,0:39:93.19:0,93,1298	0/0:51,0:11:24.08:0,24,334	0/0:40,0:40:99:0,107,1412	0/0:55,2:34:71.48:0,71,933	0/0:11,0:8:3.01:0,3,42	0/0:49,0:47:99:0,126,1758	0/0:34,0:34:99:0,99,1348	0/0:46,0:45:99:0,119,1675	0/0:61,0:58:99:0,144,1959	0/0:37,0:35:94.20:0,94,1301	0/0:40,0:31:41.69:0,42,534	0/0:27,0:15:33.08:0,33,437	0/0:29,0:11:25.32:0,25,317	0/0:44,0:30:14.96:0,15,208	0/1:74,8:49:99:185,0,484	0/0:42,0:42:99:0,108,1505	1/1:29,0:19:0.49:3,0,0	0/0:46,0:36:24.05:0,24,312	0/0:31,0:30:77.99:0,78,1054	0/0:45,1:24:2.20:0,2,729	0/1:31,2:25:29.67:30,0,190	0/0:8,0:4:12.04:0,12,166
chr10	69421369	.	G	GTA	293.26	PASS	AB=0.898;AC=5;AF=0.093;AN=54;BaseQRankSum=4.301;DP=875;FS=0.000;HRun=0;HaplotypeScore=129.7277;InbreedingCoeff=0.1243;MQ=43.29;MQ0=124;MQRankSum=-1.460;QD=2.74;ReadPosRankSum=-3.566;VQSLOD=0.6992;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:6,7:7:1.25:3,1,0	0/0:12,0:12:28.31:0,28,377	0/0:32,0:5:8.91:0,9,60	0/0:40,0:3:5.51:0,6,34	./.	0/0:30,0:29:68.57:0,69,970	0/0:37,0:34:90.11:0,90,1192	0/0:51,0:11:2.87:0,3,52	0/0:41,0:41:99:0,108,1495	0/0:39,2:24:42.53:0,43,276	0/0:6,0:3:2.88:0,3,15	0/0:47,0:45:99:0,129,1776	0/0:35,0:35:90.21:0,90,1240	0/0:45,0:43:99:0,115,1696	0/0:54,0:52:99:0,141,2084	0/0:38,0:36:90.25:0,90,1288	0/1:33,3:26:99:210,0,127	0/1:16,2:8:44.14:44,0,51	0/0:22,2:6:14.30:0,14,74	0/0:22,1:14:12.76:0,13,65	0/0:44,14:37:17.28:0,17,265	0/0:36,0:36:99:0,102,1447	0/0:27,0:20:0.47:0,0,2	0/1:34,6:30:69.99:137,0,70	0/0:27,0:27:62.97:0,63,916	0/0:29,2:18:43.24:0,43,281	0/0:21,0:16:17:0,17,151	0/0:6,1:3:8.85:0,9,57
chr10	69421415	.	C	CTG	1714.08	PASS	AC=12;AF=0.286;AN=42;BaseQRankSum=-0.968;DP=730;FS=2.013;HRun=0;HaplotypeScore=106.5819;InbreedingCoeff=0.8138;MQ=47.97;MQ0=80;MQRankSum=-3.655;QD=10.39;ReadPosRankSum=-2.730;VQSLOD=2.9259;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	./.	0/0:17,0:17:42.58:0,43,485	0/0:45,0:13:29.87:0,30,330	0/0:37,0:8:11.97:0,12,152	./.	0/0:25,0:24:57.18:0,57,723	0/0:34,0:33:72.17:0,72,881	1/1:30,19:25:48.15:719,48,0	0/0:38,0:38:75.19:0,75,923	1/1:17,0:11:2.02:34,2,0	./.	0/0:50,0:49:99:0,104,1292	0/0:38,0:38:93.28:0,93,1158	0/0:41,0:40:74.86:0,75,936	0/0:37,0:36:84.22:0,84,1065	0/0:40,0:40:81.24:0,81,1001	1/1:22,19:33:55.57:1067,56,0	1/1:8,1:4:3.22:13,3,0	./.	./.	1/1:32,4:18:4.21:13,4,0	0/0:32,0:32:78.24:0,78,973	0/0:18,0:15:14.89:0,15,107	0/0:41,0:26:28.15:0,28,242	0/0:23,0:23:57.18:0,57,722	1/1:12,0:6:1.12:9,1,0	./.	./.
chr10	69421427	.	C	CTG	438.58	PASS	AB=1.000;AC=17;AF=0.370;AN=46;BaseQRankSum=8.606;DP=688;FS=3.955;HRun=0;HaplotypeScore=108.2345;InbreedingCoeff=0.7475;MQ=48.66;MQ0=54;MQRankSum=-2.120;QD=2.63;ReadPosRankSum=1.606;VQSLOD=2.2306;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:10,0:7:1.25:3,1,0	0/0:17,0:16:38.90:0,39,473	0/0:42,0:16:48.15:0,48,606	0/0:37,0:10:17.99:0,18,236	./.	0/0:27,0:26:47.92:0,48,586	0/0:32,0:31:60.17:0,60,793	0/0:45,0:31:58.26:0,58,565	0/0:38,0:38:81.21:0,81,1045	1/1:11,2:9:8.99:121,9,0	./.	0/0:48,0:47:99:0,102,1308	0/0:40,0:39:99:0,102,1324	0/0:37,0:36:70.34:0,70,1003	0/0:37,0:36:83.85:0,84,1096	0/0:43,0:43:78.24:0,78,1011	0/1:39,0:33:20.40:39,0,20	1/1:7,3:3:6.02:104,6,0	./.	1/1:8,0:3:0.47:1,0,0	1/1:14,8:11:10.28:158,10,0	0/0:31,0:31:68.04:0,68,1070	1/1:14,0:12:11.32:41,11,0	1/1:40,0:23:6.25:27,6,0	0/0:22,0:22:51.17:0,51,669	1/1:6,1:4:6.91:102,7,0	./.	./.
chr10	69421661	.	GTC	G	3546.26	PASS	AB=0.941;AC=22;AF=0.393;AN=56;BaseQRankSum=10.507;DP=976;FS=12.826;HRun=0;HaplotypeScore=206.1048;InbreedingCoeff=0.5163;MQ=44.94;MQ0=59;MQRankSum=-2.021;QD=7.27;ReadPosRankSum=0.464;VQSLOD=2.3838;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,2:15:0:0,0,0	0/0:16,0:16:36.09:0,36,512	0/0:39,0:6:2.01:0,2,6	0/0:78,0:11:11.45:0,11,93	0/1:12,2:13:15.85:29,0,16	0/0:19,2:21:0.95:0,1,458	0/0:32,4:36:21.65:0,22,641	0/0:38,0:10:14.75:0,15,105	0/1:29,2:31:25.21:25,0,474	1/1:35,11:37:49.18:518,49,0	1/1:13,7:16:6.02:70,6,0	0/0:38,1:39:18.55:0,19,603	0/0:38,0:36:81.18:0,81,1128	0/0:33,0:33:48.02:0,48,644	0/0:38,0:37:29.68:0,30,941	0/1:39,4:42:24.25:24,0,949	0/1:14,0:8:4.37:6,0,4	0/0:29,0:22:17.10:0,17,289	1/1:11,6:10:20.27:218,20,0	1/1:12,9:14:23.87:244,24,0	1/1:47,34:71:99:1200,105,0	0/0:32,0:32:36.19:0,36,692	0/0:25,0:22:16.28:0,16,105	0/1:72,4:63:6.12:6,0,522	0/1:26,0:27:3.48:3,0,517	1/1:30,20:38:66.02:745,66,0	1/1:17,7:19:16.58:167,17,0	1/1:13,6:19:29.99:290,30,0
chr10	69421663	.	C	CTG	4918.33	PASS	AB=0.975;AC=25;AF=0.446;AN=56;BaseQRankSum=16.701;DP=981;FS=15.171;HRun=0;HaplotypeScore=201.8040;InbreedingCoeff=0.7749;MQ=44.65;MQ0=62;MQRankSum=-1.152;QD=10.00;ReadPosRankSum=1.705;VQSLOD=3.4631;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:23,1:16:0:0,0,0	0/0:15,0:15:39.12:0,39,556	0/0:40,0:6:13.98:0,14,90	0/0:82,0:11:20.12:0,20,180	1/1:10,0:13:9.01:106,9,0	0/0:21,0:21:44.86:0,45,561	0/0:37,0:37:65.12:0,65,922	0/1:40,0:12:15.10:68,0,15	0/0:31,0:31:71.48:0,71,802	1/1:46,1:37:85.68:533,86,0	1/1:20,0:16:17.07:116,17,0	0/0:38,0:38:82.72:0,83,909	0/0:39,0:37:99:0,102,1301	0/0:33,0:33:86.93:0,87,1000	0/0:39,0:37:90.54:0,91,1161	0/0:41,1:41:75.50:0,75,1249	0/0:14,0:8:1.01:0,1,16	1/1:11,18:22:43.39:840,43,0	1/1:19,0:11:8.15:99,8,0	1/1:21,0:14:16.18:72,16,0	1/1:80,0:71:99:726,132,0	0/0:32,0:32:72.91:0,73,910	1/1:15,10:22:20.92:320,21,0	1/1:51,25:63:99:1235,114,0	0/0:26,0:26:56.39:0,56,709	1/1:52,0:39:93.66:565,94,0	0/1:25,0:19:7.44:119,0,7	1/1:19,0:19:6.34:121,6,0
chr10	69421691	.	GTC	G	157.92	PASS	AB=0.914;AC=4;AF=0.071;AN=56;BaseQRankSum=3.146;DP=1046;FS=5.067;HRun=0;HaplotypeScore=183.6925;InbreedingCoeff=0.1094;MQ=44.38;MQ0=87;MQRankSum=-3.547;QD=0.92;ReadPosRankSum=-0.300;VQSLOD=2.0856;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:15:0:0,0,0	0/1:15,0:15:0.71:1,0,327	0/0:46,0:7:12.51:0,13,163	0/1:90,0:15:4.10:4,0,96	0/0:14,0:10:2.84:0,3,14	0/0:29,0:29:63.06:0,63,945	0/0:31,0:30:69.13:0,69,1081	0/1:47,0:25:1.73:2,0,50	0/0:29,0:29:65.75:0,66,916	0/0:51,0:37:67.54:0,68,754	0/0:18,0:13:8.73:0,9,76	0/0:29,0:29:59.99:0,60,845	0/0:35,0:34:81.23:0,81,1204	0/0:26,0:26:66.20:0,66,1014	0/0:41,0:40:93.09:0,93,1372	0/0:36,0:35:76.18:0,76,1082	0/1:9,9:11:10:231,0,10	0/0:34,1:30:27.64:0,28,800	0/0:24,0:14:33.44:0,33,362	0/0:32,0:23:5.20:0,5,225	0/0:89,1:77:99:0,122,1088	0/0:34,0:34:84.20:0,84,1192	0/0:38,0:26:21.87:0,22,271	0/0:92,0:81:92.08:0,92,1277	0/0:28,0:28:54.17:0,54,846	0/0:66,0:45:99:0,103,1033	0/0:20,0:15:26.39:0,26,217	0/0:8,0:7:14.07:0,14,88
chr10	69421757	.	C	CTG	425.37	PASS	AB=0.851;AC=6;AF=0.107;AN=56;BaseQRankSum=-3.206;DP=1215;FS=20.506;HRun=0;HaplotypeScore=158.7704;InbreedingCoeff=0.0773;MQ=43.08;MQ0=146;MQRankSum=-7.831;QD=1.60;ReadPosRankSum=-3.332;VQSLOD=0.1604;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:47,3:39:24.08:0,24,303	0/0:18,0:18:48.09:0,48,571	0/0:14,0:2:2.97:0,3,20	0/0:27,0:3:8.90:0,9,76	0/0:31,0:18:6.02:0,6,70	0/0:20,1:20:39.45:0,39,454	0/0:36,0:32:66.01:0,66,767	1/1:25,19:17:1.47:372,1,0	0/0:43,0:43:99:0,111,1365	0/1:64,6:45:84.76:85,0,1032	0/0:19,3:11:5.69:0,6,49	0/0:32,0:32:83.58:0,84,1062	0/0:30,0:30:81.19:0,81,976	0/0:38,0:38:96.29:0,96,1196	0/0:58,0:58:99:0,135,1637	0/0:39,0:38:93.64:0,94,1133	0/1:25,10:17:28.72:29,0,31	0/0:51,7:46:99:0,122,1327	0/0:36,2:17:16.11:0,16,414	0/0:36,1:28:24.96:0,25,301	0/0:112,6:91:99:0,145,1777	0/0:38,0:36:90.24:0,90,1093	0/0:50,0:37:36.01:0,36,391	0/0:106,1:89:99:0,168,2020	0/0:26,0:26:42.41:0,42,472	0/1:69,3:53:47.50:47,0,1394	0/1:30,11:28:7.41:7,0,393	0/0:8,1:4:9.03:0,9,114
chr10	69421799	.	GTC	G	2172.07	PASS	AB=0.974;AC=16;AF=0.308;AN=52;BaseQRankSum=11.673;DP=1232;FS=2.755;HRun=0;HaplotypeScore=136.1604;InbreedingCoeff=0.4493;MQ=38.40;MQ0=221;MQRankSum=-0.902;QD=3.84;ReadPosRankSum=3.538;VQSLOD=2.7833;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:68,1:54:40:213,40,0	0/0:18,0:16:23.96:0,24,314	./.	./.	1/1:34,8:29:5.68:28,6,0	0/0:22,0:21:17.92:0,18,291	0/0:32,1:24:26.94:0,27,352	0/0:61,0:23:56.87:0,57,874	0/0:44,0:42:78.13:0,78,1139	0/1:58,0:23:99:212,0,324	0/1:21,0:10:0:0,0,0	0/0:43,0:41:64.05:0,64,1075	0/0:37,0:35:78.18:0,78,1234	0/0:33,0:33:48.08:0,48,705	0/0:55,0:54:99:0,106,1635	0/0:45,0:43:79.08:0,79,1399	0/0:34,0:20:7.16:0,7,76	0/1:65,6:54:99:293,0,266	0/1:30,2:17:99:280,0,109	1/1:39,2:27:12.79:87,13,0	1/1:108,0:73:67.77:495,68,0	0/0:35,0:33:63.16:0,63,998	0/0:34,0:22:2.37:0,2,210	0/0:87,0:69:35.48:0,35,1170	0/0:27,0:21:27.06:0,27,423	0/1:57,1:41:21.92:538,0,22	0/1:54,0:34:74.90:75,0,237	1/1:11,0:6:17.86:124,18,0
chr10	69421803	.	CTCTG	C	4493.90	PASS	AB=0.810;AC=10;AF=0.200;AN=50;BaseQRankSum=0.514;DP=1276;FS=1.345;HRun=0;HaplotypeScore=155.5202;InbreedingCoeff=0.4535;MQ=38.01;MQ0=225;MQRankSum=-2.199;QD=11.98;ReadPosRankSum=0.901;VQSLOD=4.6925;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:73,0:55:25.64:0,26,168	0/0:16,0:14:24.07:0,24,501	./.	./.	0/0:45,0:30:8.50:0,8,47	0/0:23,0:22:18.05:0,18,455	0/0:34,0:25:27.42:0,27,441	0/0:66,0:25:65.89:0,66,1401	0/0:44,0:42:87.15:0,87,1741	0/1:51,12:23:99:522,0,607	./.	0/0:42,0:40:61.95:0,62,1701	0/0:39,0:37:56.38:0,56,1863	0/0:33,0:33:51.11:0,51,1161	0/0:56,0:55:99:0,109,2495	0/0:45,0:43:96.08:0,96,2216	0/0:35,0:21:3.96:0,4,177	0/0:76,0:58:99:0,107,920	0/1:22,8:18:99:629,0,225	1/1:28,13:26:14.98:201,15,0	1/1:84,28:75:53.43:1213,53,0	0/0:37,0:34:69.18:0,69,1546	0/0:39,0:24:16.09:0,16,249	0/0:91,0:71:67.63:0,68,1338	0/0:28,0:21:27.06:0,27,600	0/1:41,19:41:99:1317,0,159	0/1:47,10:36:99:253,0,476	1/1:6,6:6:18.06:358,18,0
chr10	69421805	.	CTG	C	2323.20	PASS	AB=0.916;AC=17;AF=0.327;AN=52;BaseQRankSum=10.498;DP=1272;FS=2.299;HRun=0;HaplotypeScore=153.3004;InbreedingCoeff=0.2970;MQ=37.82;MQ0=223;MQRankSum=0.424;QD=3.29;ReadPosRankSum=4.694;VQSLOD=2.6449;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:48,24:54:41.87:537,42,0	0/0:17,0:15:20.44:0,20,242	./.	./.	1/1:35,12:32:6.49:79,6,0	0/0:22,0:21:14.98:0,15,250	0/0:32,0:23:14.97:0,15,214	0/0:68,0:24:60.15:0,60,874	0/0:43,0:41:63.14:0,63,933	0/1:66,0:25:65.26:65,0,371	0/0:23,0:11:0:0,0,0	0/0:41,0:39:59.59:0,60,996	0/0:38,0:36:47.27:0,47,1064	0/0:33,0:33:45.11:0,45,693	0/0:55,1:55:89.96:0,90,1419	0/0:41,1:40:45.32:0,45,1268	0/0:35,0:21:8.24:0,8,110	0/1:61,20:62:99:691,0,204	0/1:30,0:18:99:194,0,104	1/1:43,0:25:4.76:35,5,0	1/1:110,0:74:6.30:284,6,0	0/0:37,0:34:60.16:0,60,907	0/1:29,10:24:25.43:25,0,93	0/1:71,21:72:63.52:64,0,507	0/0:28,0:21:23.99:0,24,335	0/1:58,0:41:93.37:359,0,93	0/1:56,0:36:48.70:49,0,237	1/1:12,0:6:17.72:111,18,0
chr10	69421903	.	CTG	C	1993.24	PASS	AB=0.873;AC=12;AF=0.214;AN=56;BaseQRankSum=10.829;DP=1301;FS=9.602;HRun=0;HaplotypeScore=164.2600;InbreedingCoeff=0.1060;MQ=44.81;MQ0=121;MQRankSum=-5.261;QD=3.23;ReadPosRankSum=-0.387;VQSLOD=1.4233;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:83,0:69:56.18:0,56,863	0/0:9,0:7:6.02:0,6,101	0/0:19,0:6:17.98:0,18,188	0/0:28,0:14:34.35:0,34,473	0/0:29,0:21:24.06:0,24,371	0/0:29,0:29:57.17:0,57,914	0/0:38,0:38:99:0,99,1584	0/0:76,0:29:69.24:0,69,1117	0/0:36,1:36:90.29:0,90,1480	0/1:69,11:67:99:329,0,2149	0/1:37,6:31:27.42:27,0,100	0/0:43,0:39:87.28:0,87,1423	0/0:29,0:26:54.18:0,54,913	0/0:45,0:44:99:0,108,1782	0/0:54,0:52:99:0,123,1987	0/0:45,0:43:99:0,102,1655	0/0:45,0:31:60.13:0,60,964	0/1:51,16:57:99:473,0,1189	0/1:29,2:12:88.16:88,0,245	0/1:51,7:49:89.01:89,0,630	0/1:115,28:118:99:492,0,2178	0/0:30,0:28:51.14:0,51,807	1/1:16,11:20:5.77:52,6,0	1/1:32,14:31:24.06:292,24,0	0/0:27,0:22:48.16:0,48,812	0/1:69,11:57:99:183,0,1736	0/1:36,6:31:99:125,0,681	0/0:14,0:13:33.08:0,33,511
chr10	69421961	.	C	CTG	2248.66	PASS	AB=0.877;AC=10;AF=0.192;AN=52;BaseQRankSum=4.869;DP=1182;FS=2.990;HRun=0;HaplotypeScore=144.0434;InbreedingCoeff=-0.2453;MQ=39.30;MQ0=192;MQRankSum=-1.954;QD=3.86;ReadPosRankSum=3.586;VQSLOD=2.5289;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:70,0:52:74.20:237,0,74	0/0:12,0:10:22.95:0,23,298	./.	./.	0/1:24,0:15:25.49:78,0,25	0/0:30,0:28:36.03:0,36,429	0/0:43,0:31:45.12:0,45,541	0/0:60,0:24:47.85:0,48,541	0/0:41,0:36:60.19:0,60,742	0/1:63,8:45:99:211,0,629	0/0:25,2:20:9.03:0,9,105	0/0:34,0:30:41.61:0,42,490	0/0:38,0:34:54.15:0,54,670	0/0:43,0:43:42.10:0,42,491	0/0:58,0:53:75.24:0,75,931	0/0:46,0:43:81.26:0,81,1005	0/0:29,0:20:32.44:0,32,351	0/1:34,21:43:99:722,0,304	0/1:46,3:11:69.18:132,0,69	0/1:39,6:36:99:159,0,282	0/1:100,21:82:99:305,0,816	0/0:36,0:35:47.36:0,47,558	0/0:26,3:24:9.03:0,9,105	0/1:34,15:38:99:188,0,440	0/0:29,0:25:63.18:0,63,763	0/1:59,7:44:99:183,0,921	0/1:24,8:21:99:175,0,275	0/0:8,0:7:14.50:0,15,174
chr10	69422053	.	C	CTG	338.59	PASS	AB=0.861;AC=8;AF=0.154;AN=52;BaseQRankSum=2.610;DP=1059;FS=0.000;HRun=0;HaplotypeScore=238.3211;InbreedingCoeff=-0.0051;MQ=36.57;MQ0=102;MQRankSum=-6.266;QD=1.46;ReadPosRankSum=-1.150;VQSLOD=2.0434;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:66,12:68:6.79:0,7,64	0/0:14,0:14:36.49:0,36,439	./.	./.	0/1:11,0:6:0:0,0,0	0/0:36,0:35:42.12:0,42,520	0/0:44,0:41:62.96:0,63,799	0/1:42,7:22:15.26:266,0,15	0/0:46,0:46:54.15:0,54,672	0/1:31,4:17:28.07:28,0,135	0/0:16,4:10:3.01:0,3,38	0/0:52,0:51:75.47:0,75,920	0/0:36,0:36:68.74:0,69,738	0/0:43,0:41:47.31:0,47,622	0/0:64,0:64:85.12:0,85,1025	0/0:49,0:49:75.90:0,76,877	0/1:15,6:13:58.31:72,0,58	0/1:45,8:45:57.22:57,0,842	0/1:31,2:12:19.74:20,0,167	0/1:15,8:11:0:0,0,0	0/0:72,7:57:18.43:0,18,262	0/0:44,0:44:81.24:0,81,1010	0/0:20,6:18:20.72:0,21,224	0/0:47,4:44:36.11:0,36,455	0/0:33,0:31:69.22:0,69,872	0/0:25,4:11:19.62:0,20,190	0/0:9,6:6:9.09:0,9,120	0/1:3,1:3:14.17:14,0,32
chr10	69422125	.	G	GC	543.64	PASS	AB=0.792;AC=4;AF=0.071;AN=56;BaseQRankSum=7.868;DP=1240;FS=25.773;HRun=0;HaplotypeScore=373.8844;InbreedingCoeff=0.0069;MQ=38.68;MQ0=79;MQRankSum=-9.299;QD=3.70;ReadPosRankSum=-4.563;VQSLOD=1.6318;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:61,0:47:10.76:0,11,111	0/0:18,0:17:39.13:0,39,498	0/0:37,0:1:3.01:0,3,41	0/0:78,0:14:16.39:0,16,193	0/0:28,0:23:8.67:0,9,78	0/0:41,0:40:38.06:0,38,488	0/0:56,0:47:74.09:0,74,858	0/0:65,0:30:59.66:0,60,737	0/0:52,0:49:47.72:0,48,632	0/1:39,18:43:99:381,0,869	0/0:14,9:20:0.53:0,1,1	0/0:48,0:48:85.05:0,85,1098	0/0:66,0:66:99:0,139,1758	0/0:59,0:59:67.98:0,68,806	0/0:73,0:73:86:0,86,1090	0/0:46,0:46:99:0,104,1341	0/0:22,0:16:21.50:0,21,257	0/0:29,0:20:38.85:0,39,416	0/1:20,3:13:4.61:5,0,295	0/0:31,19:45:7.75:0,8,126	0/0:39,1:25:7.18:0,7,81	0/0:56,0:55:73.15:0,73,951	0/0:30,0:25:12.45:0,12,155	0/0:59,0:35:33.96:0,34,392	0/0:41,0:37:61.48:0,61,729	0/1:28,13:28:99:175,0,537	0/1:18,8:20:85.78:86,0,195	0/0:14,0:12:27.09:0,27,368
chr10	69422181	.	GTC	G	3437.34	PASS	AB=0.837;AC=17;AF=0.304;AN=56;BaseQRankSum=5.226;DP=1348;FS=0.000;HRun=0;HaplotypeScore=428.1014;InbreedingCoeff=0.3743;MQ=39.10;MQ0=38;MQRankSum=-4.407;QD=7.60;ReadPosRankSum=2.213;VQSLOD=2.3366;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:52,5:51:26.76:0,27,395	0/1:18,0:18:9.12:9,0,238	0/0:57,0:17:33.21:0,33,493	0/0:93,0:29:18.25:0,18,391	0/1:47,5:49:22.33:22,0,622	0/0:60,0:63:56.47:0,56,795	0/0:72,1:69:28.43:0,28,843	0/1:33,0:18:99:195,0,124	0/0:62,0:63:35.49:0,35,497	0/1:50,18:59:99:723,0,157	1/1:21,9:29:9.22:141,9,0	0/0:36,0:41:40.67:0,41,717	0/0:51,0:51:64.52:0,65,880	0/0:55,2:62:49.91:0,50,577	0/0:63,0:67:64.35:0,64,901	0/0:53,1:59:40.35:0,40,982	0/1:19,1:19:1.06:1,0,51	0/0:15,0:12:0.95:0,1,172	1/1:20,11:22:40.31:449,40,0	1/1:29,16:48:3.59:268,4,0	1/1:13,29:38:30.09:369,30,0	0/0:60,0:58:70.25:0,70,944	0/0:27,0:25:19.07:0,19,250	0/0:54,1:37:38.62:0,39,536	0/0:38,0:41:48.90:0,49,711	0/1:34,15:41:55.56:527,0,56	1/1:18,16:33:26.14:433,26,0	0/1:4,10:13:13.55:299,0,14
chr10	69422219	.	C	CTGTG	2122.14	PASS	AB=0.961;AC=11;AF=0.196;AN=56;BaseQRankSum=7.336;DP=1212;FS=4.583;HRun=0;HaplotypeScore=397.4356;InbreedingCoeff=0.3524;MQ=38.61;MQ0=61;MQRankSum=-5.692;QD=7.66;ReadPosRankSum=-3.321;VQSLOD=1.0201;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:60,0:56:2.97:0,3,226	0/0:22,0:20:32.05:0,32,429	0/0:29,0:11:21.06:0,21,294	0/0:46,0:20:27.24:0,27,321	0/0:53,0:44:6.32:0,6,364	0/0:52,0:51:39.60:0,40,680	0/0:63,0:53:58.26:0,58,953	0/0:61,0:26:52.74:0,53,765	0/0:59,0:57:53.21:0,53,733	0/1:51,0:39:99:401,0,343	1/1:32,2:30:11.97:185,12,0	0/0:52,0:51:59.38:0,59,993	0/0:39,0:38:71.59:0,72,1086	0/0:52,0:51:52.51:0,53,825	0/0:69,0:69:62.96:0,63,1102	0/0:51,0:51:50.16:0,50,858	0/0:30,0:29:37.26:0,37,538	1/1:11,3:14:22.78:375,23,0	0/0:22,0:15:1.57:0,2,63	0/1:45,1:41:89.41:89,0,108	1/1:44,0:38:18.02:243,18,0	0/0:56,0:53:66.17:0,66,1006	0/0:32,0:25:12.02:0,12,176	0/0:50,0:39:24.88:0,25,344	0/0:33,0:31:32.62:0,33,524	0/1:37,1:30:99:350,0,242	0/1:29,4:33:41.31:490,0,41	0/1:14,0:12:21.43:152,0,21
chr10	69422227	.	GTC	G	865.73	PASS	AB=0.976;AC=12;AF=0.214;AN=56;BaseQRankSum=9.755;DP=1148;FS=8.561;HRun=0;HaplotypeScore=348.7863;InbreedingCoeff=0.1240;MQ=37.22;MQ0=64;MQRankSum=-4.492;QD=2.52;ReadPosRankSum=-2.790;VQSLOD=0.7758;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:53,2:50:9.20:9,0,165	0/0:21,0:19:19.62:0,20,434	0/0:21,0:9:23.74:0,24,213	0/0:36,0:12:24.53:0,25,175	0/0:47,1:40:31.27:0,31,420	0/0:49,0:49:22.14:0,22,712	0/0:56,1:47:65.71:0,66,1168	0/0:56,0:27:50.18:0,50,855	0/0:57,0:55:53.61:0,54,705	0/1:48,3:39:99:212,0,263	1/1:32,3:29:2.14:71,2,0	0/0:51,0:50:55.10:0,55,976	0/0:35,0:33:39.63:0,40,1118	0/0:55,0:54:56.46:0,56,820	0/0:69,0:69:68.82:0,69,1209	0/0:49,0:49:49.17:0,49,945	0/0:33,0:31:27.35:0,27,591	0/1:16,0:15:32.07:88,0,32	0/1:22,2:15:59.77:60,0,90	0/1:45,0:40:19.57:59,0,20	1/1:42,0:36:17.88:131,18,0	0/0:51,1:48:21.67:0,22,1018	0/0:32,0:26:11.76:0,12,187	0/0:50,0:36:3.86:0,4,263	0/0:31,0:28:45.02:0,45,600	0/1:36,1:30:99:176,0,276	0/1:29,0:28:62.75:148,0,63	0/1:10,0:8:3.57:66,0,4
chr10	69422241	.	GTC	G	1247.10	PASS	AB=0.987;AC=20;AF=0.357;AN=56;BaseQRankSum=10.024;DP=1030;FS=12.440;HRun=0;HaplotypeScore=293.2794;InbreedingCoeff=-0.2248;MQ=38.09;MQ0=52;MQRankSum=-4.986;QD=2.08;ReadPosRankSum=-4.950;VQSLOD=0.4033;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:54,1:51:28.86:82,0,29	0/0:15,0:13:10.13:0,10,343	0/1:13,0:4:6.97:7,0,52	0/1:30,0:8:12.70:46,0,13	0/1:45,0:37:0.70:1,0,138	0/0:41,0:41:44.96:0,45,578	0/0:50,0:41:50.68:0,51,956	0/1:47,0:29:99:120,0,273	0/0:49,0:48:20.66:0,21,425	0/1:43,4:38:74.14:223,0,74	0/1:30,1:26:4.01:23,0,4	0/0:49,0:48:63.94:0,64,778	0/0:38,0:35:32.05:0,32,819	0/0:55,0:54:31.55:0,32,493	0/0:64,0:64:47.82:0,48,760	0/0:42,0:42:52.99:0,53,756	0/1:28,0:26:12.26:12,0,277	0/1:17,0:16:40.91:169,0,41	0/1:21,1:15:56.63:147,0,57	0/1:39,0:35:8.92:39,0,9	1/1:37,0:31:2.21:59,2,0	0/1:48,0:45:14.53:15,0,767	0/1:30,0:24:16.78:17,0,40	0/1:43,0:31:79.42:79,0,84	0/0:26,0:23:15.20:0,15,453	0/1:29,1:25:99:157,0,168	0/1:30,0:29:32.54:159,0,33	1/1:8,0:6:6.75:53,7,0
chr10	69422243	.	C	CTG	1256.04	PASS	AB=0.989;AC=28;AF=0.500;AN=56;BaseQRankSum=6.718;DP=1029;FS=4.489;HRun=0;HaplotypeScore=298.3576;InbreedingCoeff=0.6185;MQ=39.07;MQ0=51;MQRankSum=-4.465;QD=2.35;ReadPosRankSum=-4.089;VQSLOD=1.4140;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:55,0:51:6.53:37,7,0	0/0:15,0:13:17.33:0,17,207	0/0:15,0:5:3.48:0,3,36	0/1:31,0:11:3.30:3,0,36	0/1:40,1:34:19.03:19,0,29	0/0:41,0:41:18.04:0,18,208	0/0:53,0:43:47.86:0,48,532	1/1:45,1:28:15.16:329,15,0	0/0:45,1:48:22.04:0,22,308	1/1:44,0:36:18.19:132,18,0	1/1:30,0:25:5.73:35,6,0	0/0:48,0:47:32.53:0,33,370	0/0:36,0:35:50.45:0,50,508	0/0:53,0:54:32.39:0,32,328	0/0:62,0:64:35.38:0,35,364	0/0:42,0:42:34.90:0,35,375	1/1:19,9:26:12.88:535,13,0	0/1:20,0:19:13.33:31,0,13	0/1:22,0:15:2.34:37,0,2	1/1:39,0:35:5.71:22,6,0	1/1:37,0:31:5.21:28,5,0	0/0:47,0:44:46.53:0,47,466	1/1:29,0:23:0.89:2,1,0	1/1:44,0:32:7.69:50,8,0	0/0:25,0:24:29.48:0,29,305	1/1:30,0:25:12.40:78,12,0	1/1:30,0:29:16.01:91,16,0	1/1:8,0:6:5.34:22,5,0
chr10	69422263	.	G	GTGTA	3844.21	PASS	AB=0.990;AC=22;AF=0.393;AN=56;BaseQRankSum=4.001;DP=897;FS=0.398;HRun=0;HaplotypeScore=248.3461;InbreedingCoeff=0.6830;MQ=47.94;MQ0=19;MQRankSum=-4.180;QD=10.06;ReadPosRankSum=1.544;VQSLOD=2.7390;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:48,0:48:21.34:21,0,146	0/0:12,0:11:26.33:0,26,399	0/0:32,0:20:57.04:0,57,580	0/0:42,0:20:44.04:0,44,461	0/1:38,0:32:2.68:3,0,163	0/0:31,0:31:45.02:0,45,563	0/0:38,0:35:68.27:0,68,1006	0/0:36,0:30:44.38:0,44,386	0/0:38,0:38:38.20:0,38,561	0/1:35,0:32:8.09:697,0,8	1/1:18,2:18:12.42:150,12,0	0/0:40,0:39:41.74:0,42,663	0/0:31,0:28:59.88:0,60,927	0/0:47,0:47:50.60:0,51,685	0/0:54,0:54:53.84:0,54,772	0/0:29,0:29:45.08:0,45,709	0/0:26,0:25:5.36:0,5,84	1/1:19,0:19:2.82:253,3,0	1/1:18,0:18:32.35:497,32,0	1/1:30,1:28:14.69:183,15,0	1/1:39,3:37:27.01:352,27,0	0/0:35,0:32:63.12:0,63,949	1/1:26,0:21:23.95:201,24,0	1/1:42,0:36:17.58:368,18,0	0/0:24,0:21:38.89:0,39,596	0/1:24,0:23:9.15:494,0,9	1/1:26,4:31:20.53:441,21,0	1/1:2,2:3:9.03:185,9,0
chr10	69422785	.	C	CA	745.76	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-6.250;DP=690;FS=4.319;HRun=2;HaplotypeScore=60.3597;InbreedingCoeff=0.9976;MQ=83.51;MQ0=1;MQRankSum=-3.336;QD=31.07;ReadPosRankSum=1.438;VQSLOD=3.2589;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,141,1732	0/0:11,0:11:24.07:0,24,297	0/0:23,0:23:66.17:0,66,788	0/0:16,0:16:48.15:0,48,589	0/0:38,0:38:99:0,111,1376	0/0:21,0:21:63.20:0,63,781	0/0:25,0:25:75.24:0,75,929	0/0:21,0:21:63.20:0,63,781	0/0:23,0:23:66.19:0,66,806	0/0:33,0:33:99:0,99,1209	0/0:23,0:23:66.20:0,66,806	0/0:21,0:21:60.19:0,60,744	0/0:18,0:18:51.14:0,51,619	0/0:31,0:31:93.26:0,93,1117	0/0:23,0:23:66.19:0,66,806	0/0:19,0:19:57.18:0,57,706	0/0:34,0:33:96.30:0,96,1190	1/1:2,22:24:60.16:841,60,0	0/0:12,0:12:36.11:0,36,436	0/0:18,0:18:54.17:0,54,669	0/0:24,0:24:72.21:0,72,879	0/0:34,0:34:93.27:0,93,1130	0/0:27,0:27:81.25:0,81,1003	0/0:30,0:30:87.27:0,87,1077	0/0:24,0:24:72.20:0,72,866	0/0:32,0:32:90.28:0,90,1115	0/0:25,0:25:69.22:0,69,855	0/0:11,0:11:33.10:0,33,406
chr10	69423743	.	T	TA	2108.83	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-9.934;DP=654;FS=0.510;HRun=5;HaplotypeScore=59.5570;InbreedingCoeff=0.9995;MQ=80.38;MQ0=0;MQRankSum=-4.780;QD=31.95;ReadPosRankSum=0.796;VQSLOD=4.1690;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,34:35:93.30:1224,93,0	0/0:11,0:11:33.08:0,33,355	0/0:15,0:15:42.04:0,42,430	0/0:19,0:19:45.11:0,45,477	1/1:2,29:31:78.21:1007,78,0	0/0:25,0:25:66.14:0,66,700	0/0:19,0:19:51.11:0,51,539	0/0:33,0:33:87.20:0,87,921	0/0:27,0:27:81.20:0,81,870	0/0:24,0:24:57.14:0,57,613	0/0:26,0:26:72.16:0,72,766	0/0:22,0:22:60.15:0,60,645	0/0:24,0:24:57.14:0,57,612	0/0:24,0:24:60.14:0,60,645	0/0:28,0:28:69.14:0,69,730	0/0:24,0:24:69.17:0,69,741	0/0:25,0:25:75.19:0,75,805	0/0:25,0:25:69.17:0,69,741	0/0:20,0:20:51.12:0,51,548	0/0:26,0:26:66.16:0,66,709	0/0:16,0:16:42.10:0,42,451	0/0:12,0:12:30.07:0,30,322	0/0:19,0:19:54.14:0,54,580	0/0:18,0:18:48.12:0,48,516	0/0:17,0:17:51.13:0,51,548	0/0:27,0:27:78.18:0,78,830	0/0:43,0:43:99:0,123,1313	0/0:19,0:19:57.14:0,57,613
chr10	69424738	.	C	CTA	21191.64	PASS	AC=28;AF=0.500;AN=56;BaseQRankSum=-17.693;DP=753;FS=9.917;HRun=0;HaplotypeScore=86.5816;InbreedingCoeff=0.9988;MQ=80.07;MQ0=1;MQRankSum=-2.668;QD=53.25;ReadPosRankSum=2.278;VQSLOD=4.9449;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,43:47:99:2376,117,0	0/0:7,0:7:18.06:0,18,293	0/0:31,0:31:75.10:0,75,1184	0/0:28,0:28:77.37:0,77,1149	1/1:0,28:28:75.26:1499,75,0	0/0:22,0:22:60.20:0,60,976	0/0:25,0:25:69.19:0,69,1095	1/1:0,26:26:78.27:1579,78,0	0/0:32,0:32:93.32:0,93,1507	1/1:3,30:35:90.30:1784,90,0	1/1:0,20:20:54.19:1096,54,0	0/0:24,0:24:66.15:0,66,996	0/0:28,0:28:75.15:0,75,1175	0/0:25,0:25:66.19:0,66,1029	0/0:36,0:36:99:0,102,1598	0/0:26,0:26:66.16:0,66,1021	1/1:1,38:39:96.33:1949,96,0	0/0:28,0:28:81.28:0,81,1307	1/1:1,20:23:63.20:1242,63,0	1/1:0,23:23:66.23:1341,66,0	1/1:1,38:39:96.33:1950,96,0	0/0:28,0:28:75.26:0,75,1220	1/1:0,20:20:54.19:1096,54,0	1/1:0,40:41:99:2124,105,0	0/0:15,0:15:39.12:0,39,613	1/1:0,20:20:60.21:1218,60,0	1/1:0,25:25:66.23:1328,66,0	1/1:0,11:11:30.10:609,30,0
chr10	69424866	.	CGTGTGT	C	235.55	PASS	AB=0.917;AC=14;AF=0.280;AN=50;BaseQRankSum=1.954;DP=602;FS=1.139;HRun=0;HaplotypeScore=142.2477;InbreedingCoeff=0.1379;MQ=63.58;MQ0=14;MQRankSum=0.632;QD=0.93;ReadPosRankSum=1.407;VQSLOD=2.3182;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:24:3:0,3,37	0/0:9,0:9:0.94:0,1,2	./.	./.	0/0:16,0:15:12.02:0,12,198	0/1:17,1:18:1.93:2,0,236	0/0:22,0:24:20.99:0,21,408	./.	0/0:25,0:24:12.48:0,12,188	0/1:23,0:20:9.51:52,0,10	1/1:7,7:14:2.97:20,3,0	0/0:25,0:24:8.96:0,9,111	0/0:21,0:21:3.81:0,4,161	0/0:15,0:15:3.01:0,3,70	0/0:26,0:27:20.95:0,21,394	0/0:26,0:26:17.99:0,18,334	0/0:19,0:27:10.02:0,10,64	0/1:18,0:28:19.03:33,0,19	0/1:27,0:28:4.80:23,0,5	1/1:10,6:16:2.44:59,2,0	0/1:39,0:37:5.96:35,0,6	0/0:14,0:23:6.87:0,7,51	1/1:17,0:17:2.84:15,3,0	0/1:25,0:24:0:0,0,0	0/0:15,0:15:9.49:0,9,99	0/1:26,3:28:8.32:74,0,8	0/1:11,4:14:9.51:52,0,10	0/0:5,0:5:2.67:0,3,11
chr10	69425817	.	G	GA	4055.63	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=1.942;DP=667;FS=1.074;HRun=6;HaplotypeScore=69.2932;InbreedingCoeff=0.9787;MQ=84.74;MQ0=1;MQRankSum=0.602;QD=22.28;ReadPosRankSum=0.437;VQSLOD=2.7955;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,0:47:99:609,119,0	0/0:11,0:11:30.07:0,30,306	0/0:27,0:27:51.09:0,51,509	0/0:13,0:13:30.03:0,30,291	1/1:2,0:24:62.57:319,63,0	0/0:26,0:26:66.15:0,66,673	0/0:22,0:22:51.10:0,51,514	1/1:3,21:24:63.18:776,63,0	0/0:25,0:25:69.13:0,69,696	0/0:32,0:32:93.21:0,93,948	0/0:18,0:18:39.08:0,39,398	0/0:17,0:17:48.11:0,48,490	0/0:24,0:24:66.14:0,66,673	0/0:23,0:23:69.16:0,69,704	0/0:28,0:28:81.18:0,81,826	0/0:12,0:12:33.07:0,33,337	1/1:3,0:25:54.01:276,54,0	0/0:24,0:24:66.15:0,66,673	0/0:18,0:18:42.07:0,42,417	0/0:33,0:33:90.20:0,90,917	0/0:16,0:16:42.09:0,42,429	0/0:22,0:22:63.13:0,63,637	1/1:4,22:26:66.21:830,66,0	1/1:0,35:35:99:1245,99,0	0/0:24,0:24:63.14:0,63,643	0/0:34,0:34:99:0,99,1000	0/0:32,0:32:90.14:0,90,899	0/0:4,0:4:6.01:0,6,61
chr10	69426545	.	GCA	G	513.01	PASS	AB=0.906;AC=33;AF=0.660;AN=50;BaseQRankSum=5.178;DP=592;FS=12.147;HRun=0;HaplotypeScore=155.1810;InbreedingCoeff=-0.0384;MQ=61.30;MQ0=13;MQRankSum=-3.842;QD=1.08;ReadPosRankSum=-0.900;VQSLOD=1.8058;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:46:17.04:84,17,0	0/1:9,0:9:5:5,0,68	./.	./.	1/1:15,0:17:4.66:19,5,0	0/1:16,3:19:11.10:11,0,219	0/1:17,3:20:20.08:20,0,114	./.	0/1:17,4:21:43.25:43,0,177	0/1:15,0:20:6.65:42,0,7	1/1:12,0:18:5.68:28,6,0	0/1:20,1:22:22.19:22,0,238	0/1:18,0:18:50.07:50,0,63	0/1:20,0:21:2.10:2,0,119	0/1:21,2:23:2.09:2,0,322	0/0:22,1:25:4.13:0,4,415	0/0:25,0:25:18.62:0,19,242	1/1:14,0:20:16.96:84,17,0	1/1:14,0:15:5.68:28,6,0	1/1:14,0:16:8.52:42,9,0	0/1:26,0:25:0:0,0,0	0/1:17,2:19:23.13:23,0,78	1/1:6,1:7:2.98:32,3,0	0/1:38,5:43:2.23:2,0,343	0/1:15,4:19:6.36:6,0,227	1/1:20,0:23:6.57:30,7,0	1/1:13,0:14:5.51:27,6,0	1/1:9,0:13:11.36:56,11,0
chr10	69427559	.	GCTCTCTCTCTCTCTCTCTCTCTCT	G	1067.10	PASS	AB=1.000;AC=7;AF=0.135;AN=52;BaseQRankSum=3.534;DP=547;FS=1.455;HRun=0;HaplotypeScore=299.2058;InbreedingCoeff=0.6607;MQ=57.76;MQ0=18;MQRankSum=-3.684;QD=9.79;ReadPosRankSum=-1.475;VQSLOD=1.6719;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:21,8:29:9.03:565,9,0	0/0:6,0:6:6.02:0,6,607	./.	0/1:35,0:19:12.55:13,0,115	1/1:21,6:26:3.01:188,3,0	0/0:21,0:21:25.28:0,25,1818	0/0:21,0:22:42.14:0,42,3268	./.	0/0:15,0:16:33.11:0,33,2514	0/0:9,0:9:15.05:0,15,721	0/0:11,0:12:12.04:0,12,476	0/0:18,0:19:42.14:0,42,3381	0/0:11,0:10:18.06:0,18,1695	0/0:15,0:17:21.07:0,21,1935	0/0:18,0:18:33.11:0,33,2682	0/0:12,0:16:9.03:0,9,605	1/1:15,1:17:9.03:426,9,0	0/0:16,0:18:36.12:0,36,2574	0/0:27,0:27:30.09:0,30,856	0/0:18,0:23:30.10:0,30,1229	0/0:19,0:19:19.60:0,20,700	0/0:14,0:16:21.07:0,21,1560	0/0:13,0:15:12.04:0,12,563	0/0:16,0:18:21.07:0,21,796	0/0:18,0:18:24.08:0,24,1477	0/0:19,0:21:38.33:0,38,1447	0/0:20,0:27:44.99:0,45,1547	0/0:14,0:13:18.06:0,18,825
chr10	69427608	.	C	CAA	8510.53	PASS	AB=1.000;AC=29;AF=0.518;AN=56;BaseQRankSum=-1.735;DP=467;FS=15.826;HRun=0;HaplotypeScore=87.7873;InbreedingCoeff=0.8768;MQ=72.10;MQ0=10;MQRankSum=-1.572;QD=30.39;ReadPosRankSum=-2.499;VQSLOD=4.6394;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:22,0:22:51.08:672,51,0	0/0:3,0:3:9.03:0,9,124	0/0:25,0:15:39.11:0,39,528	0/1:33,0:14:19.21:19,0,114	1/1:22,0:21:38.93:499,39,0	0/0:17,0:17:35.91:0,36,524	0/0:16,0:16:45.15:0,45,659	1/1:1,14:16:42.14:692,42,0	0/0:15,0:15:35.39:0,35,449	1/1:1,20:21:60.19:969,60,0	1/1:19,0:19:50.14:726,50,0	0/0:18,0:18:50.53:0,51,718	0/0:16,0:16:44.50:0,45,599	0/0:17,0:17:42.12:0,42,591	0/0:12,0:12:33.11:0,33,464	0/0:13,0:13:25.89:0,26,349	1/1:20,0:20:54:679,54,0	0/0:11,0:11:30.86:0,31,356	1/1:3,22:26:75.17:1156,75,0	1/1:20,0:20:54.14:837,54,0	1/1:0,14:14:3.01:38,3,0	0/0:17,0:16:39.12:0,39,538	1/1:18,0:18:51.06:734,51,0	1/1:3,8:11:5.99:60,6,0	0/0:7,0:7:18.06:0,18,271	1/1:3,14:17:47.80:706,48,0	1/1:16,0:16:47.87:601,48,0	1/1:4,0:4:11.23:123,11,0
chr10	69429878	.	TAGAGA	T	2539.66	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.004;DP=625;FS=14.476;HRun=0;HaplotypeScore=117.8483;InbreedingCoeff=0.9977;MQ=86.89;MQ0=1;MQRankSum=-6.848;QD=39.68;ReadPosRankSum=1.924;VQSLOD=2.9977;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,39:41:81.28:1750,81,0	0/0:14,0:14:42.14:0,42,1332	0/0:23,0:23:64.09:0,64,1701	0/0:23,0:23:52.45:0,52,1485	1/1:1,22:23:42.14:911,42,0	0/0:19,0:19:57.20:0,57,1807	0/0:26,0:26:78.27:0,78,2421	0/0:19,0:19:57.19:0,57,1703	0/0:22,0:22:66.23:0,66,2091	0/0:18,0:18:51.17:0,51,1544	0/0:17,0:17:51.16:0,51,1540	0/0:23,0:22:63.20:0,63,1883	0/0:17,0:17:48.16:0,48,1519	0/0:24,0:24:66.23:0,66,2093	0/0:14,0:14:42.14:0,42,1310	0/0:14,0:14:36.12:0,36,1137	0/0:30,0:30:90.26:0,90,2640	0/0:29,0:29:84.29:0,84,2645	0/0:22,0:22:60.21:0,60,1800	0/0:20,0:20:60.21:0,60,1825	0/0:54,0:54:99:0,156,4573	0/0:7,0:7:21.07:0,21,644	0/0:11,0:11:33.10:0,33,974	0/0:36,0:36:99:0,105,3178	0/0:16,0:16:48.16:0,48,1522	0/0:27,0:27:81.27:0,81,2483	0/0:18,0:18:54.19:0,54,1711	0/0:18,0:18:54.14:0,54,1569
chr10	69430473	.	GTGTGTGTGTGT	G	395.04	PASS	AB=0.922;AC=4;AF=0.074;AN=54;BaseQRankSum=6.251;DP=485;FS=5.015;HRun=0;HaplotypeScore=136.2009;InbreedingCoeff=0.1377;MQ=41.06;MQ0=47;MQRankSum=-5.532;QD=7.18;ReadPosRankSum=-4.188;VQSLOD=0.8592;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:25,3:24:53.21:71,0,53	0/0:7,0:7:6.91:0,7,210	./.	0/0:10,0:2:6.02:0,6,94	1/1:9,2:10:1.82:5,2,0	0/0:22,0:20:37.01:0,37,1331	0/0:19,0:15:13.84:0,14,782	0/0:27,0:23:65.08:0,65,1808	0/0:18,0:17:27.56:0,28,920	0/0:18,0:16:38.62:0,39,1599	0/0:8,0:4:3.01:0,3,147	0/0:15,0:15:30.10:0,30,1152	0/0:20,0:18:49.52:0,50,1823	0/0:23,0:20:51.17:0,51,2002	0/0:30,0:29:54.17:0,54,2261	0/0:28,0:26:57.70:0,58,2142	0/1:15,0:11:13.51:411,0,14	0/0:23,0:17:30.56:0,31,1177	0/0:7,0:4:12.04:0,12,419	0/0:15,0:13:7.74:0,8,261	0/0:12,0:8:5.98:0,6,285	0/0:20,0:19:32.93:0,33,1248	0/0:13,0:12:8.69:0,9,237	0/0:37,0:31:28.70:0,29,953	0/0:17,0:16:34:0,34,1530	0/0:13,0:13:39.13:0,39,1628	0/0:15,0:14:23.93:0,24,947	0/0:10,0:6:2.90:0,3,157
chr10	69430487	.	G	GGAGA	572.15	PASS	AB=0.935;AC=12;AF=0.273;AN=44;BaseQRankSum=3.462;DP=447;FS=32.639;HRun=0;HaplotypeScore=111.6686;InbreedingCoeff=0.4234;MQ=39.14;MQ0=44;MQRankSum=-4.367;QD=4.65;ReadPosRankSum=-3.462;VQSLOD=-0.2457;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:26,3:24:82.79:184,0,83	0/0:7,0:7:2.35:0,2,45	./.	./.	1/1:13,2:14:3.01:65,3,0	0/0:20,0:18:11.37:0,11,183	0/0:17,0:13:8.76:0,9,120	./.	0/0:17,0:17:9.50:0,9,162	0/1:18,0:17:96.41:143,0,96	./.	0/0:17,0:17:8.78:0,9,120	0/0:19,0:17:8.20:0,8,118	0/0:23,0:19:15.04:0,15,212	0/0:29,0:28:18.05:0,18,241	0/0:23,0:21:29.73:0,30,400	1/1:12,1:13:13.58:223,14,0	0/0:26,0:19:9.02:0,9,96	1/1:10,0:8:3.01:38,3,0	0/1:8,0:9:0:0,0,0	./.	0/0:18,0:17:11.97:0,12,180	0/0:12,0:13:9.03:0,9,138	0/0:33,0:28:17.56:0,18,224	0/0:15,0:14:4.26:0,4,49	1/1:11,0:12:4.37:48,4,0	0/1:11,0:10:0.11:0,0,0	./.
chr10	69431651	.	T	TG	12120.65	PASS	AB=1.000;AC=25;AF=0.446;AN=56;BaseQRankSum=-13.483;DP=658;FS=25.372;HRun=0;HaplotypeScore=65.6477;InbreedingCoeff=0.9279;MQ=65.79;MQ0=1;MQRankSum=-1.248;QD=35.44;ReadPosRankSum=3.173;VQSLOD=3.2261;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,41:42:99:1608,102,0	0/0:13,0:13:39.08:0,39,472	0/0:17,0:14:16.01:0,16,242	0/0:14,0:12:23.98:0,24,304	1/1:0,28:29:84.28:1294,84,0	0/0:17,0:17:48.10:0,48,592	0/0:18,0:18:54.13:0,54,690	1/1:2,35:37:99:1457,105,0	0/0:18,0:19:57.16:0,57,764	0/0:35,0:36:99:0,105,1354	0/0:16,0:16:48.14:0,48,620	0/0:21,0:21:63.20:0,63,858	0/0:33,0:34:99:0,102,1375	0/0:16,0:16:48.11:0,48,602	0/0:24,0:24:72.20:0,72,947	0/0:24,0:25:75.21:0,75,1002	0/1:28,0:28:14.81:43,0,15	1/1:1,0:18:45.06:425,45,0	1/1:2,18:20:56.54:848,57,0	1/1:1,18:19:51.08:729,51,0	1/1:1,13:14:36.12:567,36,0	0/0:19,0:20:42.90:0,43,670	1/1:2,25:27:62.83:1021,63,0	1/1:6,19:25:68.60:995,69,0	0/0:26,0:26:78.25:0,78,1064	1/1:2,25:27:36.51:1079,37,0	1/1:3,36:40:99:1624,104,0	1/1:1,13:16:30.09:431,30,0
chr10	69433762	.	GA	G	676.79	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.372;DP=692;FS=4.275;HRun=2;HaplotypeScore=65.2095;InbreedingCoeff=0.9920;MQ=96.12;MQ0=0;MQRankSum=-3.542;QD=30.76;ReadPosRankSum=2.208;VQSLOD=3.3162;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:99:0,117,1708	0/0:7,0:7:21.06:0,21,294	0/0:36,0:36:99:0,105,1522	0/0:30,0:30:87.29:0,87,1276	0/0:20,0:20:54.17:0,54,784	0/0:28,0:28:78.24:0,78,1129	0/0:32,0:32:93.31:0,93,1378	0/0:31,0:31:93.32:0,93,1393	0/0:28,0:28:84.28:0,84,1255	0/0:26,0:26:75.25:0,75,1106	0/0:15,0:15:45.15:0,45,663	0/0:21,0:21:60.20:0,60,897	0/0:19,0:19:54.18:0,54,810	0/0:28,0:28:84.28:0,84,1259	0/0:28,0:28:84.27:0,84,1239	0/0:21,0:21:63.21:0,63,944	0/0:34,0:34:99:0,102,1506	1/1:1,21:22:60.19:772,60,0	0/0:21,0:21:63.21:0,63,944	0/0:21,0:21:63.20:0,63,925	0/0:39,0:39:99:0,114,1689	0/0:18,0:18:54.16:0,54,755	0/0:17,0:17:51.17:0,51,758	0/0:40,0:40:99:0,120,1774	0/0:18,0:18:51.14:0,51,722	0/0:27,0:27:78.24:0,78,1132	0/0:18,0:18:54.18:0,54,809	0/0:7,0:7:21.07:0,21,315
chr10	69434649	.	T	TC	2362.47	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-6.421;DP=564;FS=6.890;HRun=1;HaplotypeScore=71.0013;InbreedingCoeff=0.9967;MQ=80.79;MQ0=0;MQRankSum=-4.016;QD=39.37;ReadPosRankSum=0.254;VQSLOD=4.0848;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,27:28:78.18:1137,78,0	0/0:9,0:9:27.09:0,27,350	0/0:19,0:19:51.12:0,51,614	0/0:32,0:32:78.21:0,78,965	1/1:1,31:31:90.30:1347,90,0	0/0:18,0:18:51.15:0,51,647	0/0:20,0:20:60.17:0,60,751	0/0:32,0:32:96.29:0,96,1213	0/0:19,0:19:54.18:0,54,701	0/0:23,0:23:66.20:0,66,843	0/0:15,0:15:39.13:0,39,505	0/0:17,0:17:51.16:0,51,649	0/0:23,0:23:69.20:0,69,867	0/0:16,0:16:45.15:0,45,584	0/0:14,0:14:42.14:0,42,545	0/0:16,0:16:48.16:0,48,623	0/0:22,0:22:66.20:0,66,840	0/0:16,0:16:48.16:0,48,622	0/0:13,0:13:36.09:0,36,448	0/0:28,0:28:81.22:0,81,1009	0/0:10,0:10:30.08:0,30,374	0/0:17,0:17:51.17:0,51,660	0/0:27,0:27:78.25:0,78,1012	0/0:14,0:14:30.08:0,30,374	0/0:22,0:22:63.19:0,63,805	0/0:28,0:28:84.27:0,84,1090	0/0:27,0:26:81.26:0,81,1051	0/0:7,0:7:21.07:0,21,272
chr10	69434803	.	CTTTG	C	2605.72	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=13.822;DP=509;FS=1.498;HRun=0;HaplotypeScore=106.5808;InbreedingCoeff=0.9947;MQ=82.75;MQ0=0;MQRankSum=-10.120;QD=29.28;ReadPosRankSum=0.566;VQSLOD=3.7559;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,29:30:81.06:862,81,0	0/0:5,0:5:15.05:0,15,431	0/0:19,0:19:54.12:0,54,1479	0/0:17,0:17:48.16:0,48,1299	1/1:0,9:9:21.05:221,21,0	0/0:16,0:16:48.16:0,48,1387	0/0:23,0:23:69.24:0,69,1986	0/0:36,0:36:99:0,105,2933	0/0:22,0:22:66.23:0,66,1910	0/0:17,0:17:51.16:0,51,1432	0/0:8,0:8:24.08:0,24,648	0/0:18,0:18:54.19:0,54,1576	0/0:20,0:20:60.21:0,60,1733	0/0:18,0:18:54.19:0,54,1562	0/0:18,0:18:54.19:0,54,1566	0/0:20,0:20:60.21:0,60,1741	1/1:1,15:16:45:497,45,0	0/0:29,1:30:48.29:0,48,2381	0/0:22,0:23:69.23:0,69,1863	0/0:15,0:15:45.15:0,45,1304	0/0:19,0:19:57.20:0,57,1652	0/0:13,0:13:39.13:0,39,1125	1/1:0,11:11:32.99:424,33,0	1/1:4,19:23:50.45:776,50,0	0/0:10,0:10:30.10:0,30,869	0/0:18,0:18:54.19:0,54,1534	0/0:21,0:20:63.22:0,63,1747	0/0:14,0:14:42.14:0,42,1217
chr10	69434808	.	A	AAC	2793.53	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=13.995;DP=511;FS=0.945;HRun=0;HaplotypeScore=91.9837;InbreedingCoeff=0.9885;MQ=81.43;MQ0=0;MQRankSum=-11.419;QD=28.80;ReadPosRankSum=-0.390;VQSLOD=4.5242;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,29:34:87.21:967,87,0	0/0:4,0:4:12.04:0,12,196	0/0:20,0:20:50.30:0,50,827	0/0:17,0:17:48.16:0,48,769	1/1:1,9:10:27.05:289,27,0	0/0:18,0:18:54.18:0,54,877	0/0:23,0:23:69.24:0,69,1125	0/0:33,0:33:93.30:0,93,1453	0/0:22,0:22:66.21:0,66,1053	0/0:17,0:17:48.16:0,48,783	0/0:6,0:6:15.05:0,15,245	0/0:19,0:19:57.19:0,57,926	0/0:19,0:19:57.19:0,57,918	0/0:19,0:19:54.17:0,54,850	0/0:20,0:20:60.19:0,60,949	0/0:20,0:20:60.19:0,60,954	1/1:3,15:18:42.12:514,42,0	0/0:27,1:28:40.67:0,41,1173	0/0:22,0:22:66.22:0,66,1066	0/0:16,0:16:42.14:0,42,685	0/0:20,0:20:60.19:0,60,955	0/0:12,0:12:33.10:0,33,514	1/1:0,11:11:27.07:366,27,0	1/1:3,19:24:57.13:832,57,0	0/0:10,0:10:30.10:0,30,489	0/0:17,0:17:51.17:0,51,832	0/0:18,0:17:54.18:0,54,881	0/0:14,0:14:42.14:0,42,685
chr10	69435063	.	TA	T	609.10	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.438;DP=667;FS=5.177;HRun=7;HaplotypeScore=62.8794;InbreedingCoeff=0.9980;MQ=77.12;MQ0=0;MQRankSum=-2.545;QD=25.38;ReadPosRankSum=1.563;VQSLOD=4.3628;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:84.26:0,84,1044	0/0:16,0:16:45.14:0,45,566	0/0:19,0:19:38.61:0,39,449	0/0:18,0:18:35.68:0,36,404	0/0:25,0:25:72.22:0,72,893	0/0:21,1:22:29.57:0,30,670	0/0:32,0:32:75.24:0,75,943	0/0:34,0:34:93.28:0,93,1147	0/0:22,0:22:63.20:0,63,791	0/0:31,0:31:84.27:0,84,1057	0/0:16,0:16:39.12:0,39,491	0/0:19,0:19:48.14:0,48,581	0/0:23,0:23:63.20:0,63,789	0/0:20,0:20:49.97:0,50,639	0/0:32,0:32:93.26:0,93,1133	0/0:27,0:27:78.24:0,78,969	0/0:33,0:33:96.31:0,96,1208	1/1:1,23:24:69.15:704,69,0	0/0:21,0:21:57.14:0,57,717	0/0:16,0:16:42.13:0,42,528	0/0:23,0:23:57.17:0,57,705	0/0:19,0:19:57.17:0,57,704	0/0:28,0:28:66.20:0,66,819	0/0:14,0:14:39.08:0,39,473	0/0:25,0:25:72.23:0,72,906	0/0:34,0:34:93.29:0,93,1159	0/0:33,0:33:93.26:0,93,1140	0/0:10,0:10:27.07:0,27,325
chr10	69435743	.	TAA	T	4826.90	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=8.270;DP=615;FS=0.714;HRun=14;HaplotypeScore=86.7479;InbreedingCoeff=0.9924;MQ=73.18;MQ0=1;MQRankSum=-0.882;QD=15.88;ReadPosRankSum=6.204;VQSLOD=4.0748;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,27:35:37.14:504,37,0	0/0:13,0:13:27.55:0,28,362	0/0:25,0:15:10.51:0,11,197	0/0:19,0:15:24.55:0,25,212	1/1:5,19:24:43.67:390,44,0	0/0:22,0:23:60.13:0,60,744	0/0:14,0:14:33.06:0,33,421	1/1:8,19:27:33.37:426,33,0	0/0:14,0:16:39.03:0,39,472	0/0:28,0:32:67.09:0,67,749	0/0:18,0:21:53.61:0,54,609	0/0:20,0:23:60.11:0,60,755	0/0:16,0:19:47.11:0,47,561	0/0:12,0:12:27.07:0,27,345	0/0:23,0:25:59.14:0,59,712	0/0:16,0:19:44.62:0,45,567	1/1:2,2:27:66.38:316,66,0	1/1:2,0:25:60.35:261,60,0	1/1:9,8:17:23.56:205,24,0	1/1:4,23:29:56.45:541,56,0	1/1:4,8:13:20.71:178,21,0	0/0:18,0:19:35.88:0,36,454	1/1:7,18:27:44.60:447,45,0	1/1:4,9:13:27.02:249,27,0	0/0:26,0:30:68.64:0,69,819	1/1:4,13:18:41.88:370,42,0	1/1:7,26:34:71.76:650,72,0	1/1:1,11:13:32.76:289,33,0
chr10	69436121	.	A	AT	1451.82	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=3.229;DP=636;FS=0.000;HRun=8;HaplotypeScore=102.4037;InbreedingCoeff=0.9479;MQ=82.61;MQ0=0;MQRankSum=-3.911;QD=23.80;ReadPosRankSum=0.216;VQSLOD=3.3763;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,30:36:93.25:1045,93,0	0/0:10,0:10:23.99:0,24,215	0/0:18,0:19:31.59:0,32,304	0/0:15,0:17:6.30:0,6,211	1/1:6,19:25:24.57:528,25,0	0/0:15,0:15:42.02:0,42,383	0/0:30,0:30:78.02:0,78,709	0/0:35,0:35:96:0,96,870	0/0:29,0:29:72.03:0,72,659	0/0:23,0:23:60.02:0,60,549	0/0:16,0:16:48.03:0,48,439	0/0:19,0:19:45.01:0,45,412	0/0:23,0:23:66:0,66,593	0/0:28,0:28:69.02:0,69,631	0/0:26,0:26:60.02:0,60,549	0/0:32,0:32:78.01:0,78,714	0/0:15,0:15:39.01:0,39,352	0/0:21,0:21:51.02:0,51,467	0/0:19,0:19:51.02:0,51,467	0/0:32,0:32:81.01:0,81,737	0/0:20,0:20:57.01:0,57,517	0/0:20,0:20:54.02:0,54,493	0/0:25,0:25:54:0,54,494	0/0:26,0:26:74.99:0,75,677	0/0:17,0:17:45.01:0,45,412	0/0:25,0:25:63.02:0,63,576	0/0:25,0:24:63.02:0,63,577	0/0:8,0:8:24.01:0,24,220
chr10	69436297	.	ACCAGAG	A	2181.63	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=11.350;DP=665;FS=0.000;HRun=0;HaplotypeScore=158.2157;InbreedingCoeff=0.9984;MQ=92.23;MQ0=0;MQRankSum=-9.939;QD=41.95;ReadPosRankSum=-0.199;VQSLOD=3.4388;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,25:28:75.22:1293,75,0	0/0:8,0:8:24.08:0,24,901	0/0:35,0:35:75.12:0,75,3469	0/0:22,0:22:60.21:0,60,2064	1/1:0,23:24:60.03:1011,60,0	0/0:16,0:16:48.16:0,48,1807	0/0:24,0:24:72.25:0,72,2597	0/0:32,0:32:96.33:0,96,3506	0/0:32,0:32:96.33:0,96,3476	0/0:27,0:27:81.27:0,81,2863	0/0:25,0:25:75.22:0,75,2651	0/0:27,0:27:81.28:0,81,3019	0/0:20,0:20:60.19:0,60,2142	0/0:28,0:28:84.29:0,84,3068	0/0:17,0:17:51.18:0,51,1895	0/0:31,0:31:93.32:0,93,3442	0/0:28,0:28:81.28:0,81,2995	0/0:26,0:26:78.27:0,78,2908	0/0:22,0:22:66.23:0,66,2311	0/0:18,0:18:51.18:0,51,1818	0/0:28,0:28:84.25:0,84,3025	0/0:27,0:27:78.27:0,78,2850	0/0:18,0:18:54.19:0,54,2031	0/0:27,0:27:81.28:0,81,3024	0/0:20,0:20:60.21:0,60,2259	0/0:21,0:21:63.21:0,63,2264	0/0:25,0:25:75.26:0,75,2674	0/0:9,0:9:27.09:0,27,1016
chr10	69436304	.	TACACAG	T	2097.03	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=10.688;DP=658;FS=3.720;HRun=0;HaplotypeScore=156.2452;InbreedingCoeff=0.9992;MQ=93.06;MQ0=0;MQRankSum=-10.669;QD=42.80;ReadPosRankSum=1.492;VQSLOD=3.3981;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,25:25:69.24:1243,69,0	0/0:9,0:9:27.09:0,27,1016	0/0:35,0:36:99:0,105,3565	0/0:22,0:22:63.22:0,63,2129	1/1:1,23:24:54.19:975,54,0	0/0:17,0:17:51.18:0,51,1895	0/0:24,0:24:72.25:0,72,2578	0/0:31,0:31:93.32:0,93,3462	0/0:30,0:30:90.31:0,90,3370	0/0:26,0:26:78.27:0,78,2753	0/0:24,0:24:72.25:0,72,2706	0/0:28,0:28:84.27:0,84,2955	0/0:20,0:20:60.21:0,60,2151	0/0:25,0:25:75.24:0,75,2641	0/0:18,0:18:54.16:0,54,1857	0/0:30,0:30:90.31:0,90,3286	0/0:26,0:26:78.27:0,78,2911	0/0:26,0:26:78.27:0,78,2858	0/0:21,0:21:63.22:0,63,2176	0/0:17,0:17:49.41:0,49,1754	0/0:28,0:28:84.29:0,84,3150	0/0:26,0:26:75.26:0,75,2718	0/0:18,0:18:54.19:0,54,1965	0/0:31,0:31:93.32:0,93,3487	0/0:22,0:22:66.23:0,66,2464	0/0:22,0:22:66.23:0,66,2467	0/0:22,0:22:66.23:0,66,2484	0/0:10,0:10:30.10:0,30,1048
chr10	69438012	.	CT	C	7164.96	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=12.255;DP=622;FS=5.107;HRun=7;HaplotypeScore=65.1539;InbreedingCoeff=0.9977;MQ=87.06;MQ0=0;MQRankSum=-8.717;QD=27.66;ReadPosRankSum=3.539;VQSLOD=5.7055;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,38:40:99:1139,113,0	0/0:14,0:14:36.11:0,36,451	0/0:27,0:27:66.14:0,66,801	0/0:21,0:20:54.14:0,54,617	1/1:2,20:22:57.13:582,57,0	0/0:19,0:19:51.15:0,51,628	0/0:24,0:24:69.21:0,69,855	0/0:20,0:20:60.18:0,60,744	0/0:24,0:24:72.21:0,72,883	0/0:27,0:27:78.24:0,78,969	0/0:19,0:19:51.16:0,51,632	0/0:19,0:19:57.18:0,57,717	0/0:25,0:25:72.20:0,72,875	0/0:25,0:25:72.22:0,72,894	0/0:24,0:24:65.70:0,66,802	0/0:32,0:32:90.28:0,90,1121	1/1:0,14:14:42.10:428,42,0	1/1:2,17:19:51.11:520,51,0	1/1:3,21:24:63.14:642,63,0	1/1:1,26:27:69.15:704,69,0	1/1:2,26:28:72.16:735,72,0	0/0:23,0:23:63.18:0,63,770	1/1:1,13:14:39.09:398,39,0	1/1:0,23:23:66.15:673,66,0	0/0:20,0:20:51.15:0,51,630	1/1:3,20:23:63.14:640,63,0	1/1:0,20:20:54.12:551,54,0	1/1:0,5:5:15.03:153,15,0
chr10	69438464	.	GGTGTGTGTGTGTGT	G	284.46	PASS	AB=0.846;AC=7;AF=0.152;AN=46;BaseQRankSum=4.202;DP=545;FS=22.014;HRun=0;HaplotypeScore=177.4868;InbreedingCoeff=0.5191;MQ=61.89;MQ0=25;MQRankSum=-4.305;QD=3.47;ReadPosRankSum=-0.211;VQSLOD=0.8162;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:41.62:0,42,2432	0/0:10,0:10:12.51:0,13,639	./.	./.	0/0:15,0:15:9.03:0,9,559	0/0:12,0:12:9.03:0,9,395	0/0:30,0:28:27.56:0,28,1296	0/0:24,0:22:6.02:0,6,197	0/0:14,0:13:21.53:0,22,923	0/0:16,0:16:11.25:0,11,408	./.	0/0:27,0:26:30.08:0,30,1281	0/0:17,0:16:12.04:0,12,474	0/0:19,0:19:18.04:0,18,734	0/0:6,0:7:15.05:0,15,672	0/0:8,0:8:9.03:0,9,312	0/0:19,0:17:15.52:0,16,461	0/0:14,0:15:3.38:0,3,309	0/0:16,0:16:0.89:0,1,2	1/1:9,2:11:5.98:136,6,0	./.	0/0:16,0:14:20.24:0,20,778	0/1:18,4:22:17.93:110,0,18	1/1:30,2:31:3.48:37,3,0	0/0:18,0:18:15.04:0,15,597	0/0:18,0:18:9.02:0,9,100	1/1:14,1:15:5.97:118,6,0	./.
chr10	69439048	.	C	CT	14977.14	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-18.727;DP=713;FS=0.878;HRun=0;HaplotypeScore=63.1592;InbreedingCoeff=0.9922;MQ=87.77;MQ0=0;MQRankSum=-3.399;QD=43.41;ReadPosRankSum=3.178;VQSLOD=5.3668;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,53:54:99:2206,138,0	0/0:7,0:7:21.07:0,21,294	0/0:34,0:34:99:0,99,1369	0/0:26,0:26:78.20:0,78,994	1/1:0,21:21:63.21:1007,63,0	0/0:16,0:16:48.16:0,48,664	0/0:16,0:16:48.15:0,48,653	1/1:0,29:28:87.27:1345,87,0	0/0:23,0:23:66.22:0,66,919	0/0:31,0:31:93.30:0,93,1278	0/0:21,0:21:54.18:0,54,753	0/0:33,0:33:93.27:0,93,1278	0/0:26,0:26:78.26:0,78,1090	0/0:35,0:35:99:0,99,1381	0/0:31,0:31:90.29:0,90,1238	0/0:29,0:29:87.28:0,87,1199	1/1:0,23:23:63.21:1007,63,0	1/1:1,16:17:45.15:720,45,0	1/1:2,20:22:57.19:912,57,0	1/1:1,25:26:75.26:1199,75,0	1/1:1,37:38:99:1631,102,0	0/0:24,0:24:66.21:0,66,902	1/1:0,19:19:48.16:767,48,0	1/1:0,26:26:75.26:1199,75,0	0/0:16,0:16:48.15:0,48,655	1/1:3,28:31:9.50:1257,10,0	1/1:1,27:28:75.26:1199,75,0	1/1:0,11:11:33.11:528,33,0
chr10	69441952	.	A	AT	389.49	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-4.095;DP=645;FS=1.942;HRun=9;HaplotypeScore=63.2880;InbreedingCoeff=0.9872;MQ=82.54;MQ0=0;MQRankSum=-1.170;QD=22.91;ReadPosRankSum=-0.575;VQSLOD=4.3265;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:25,1:26:44.79:0,45,614	0/0:17,0:17:38.96:0,39,333	0/0:21,0:22:40.31:0,40,333	0/0:16,0:16:20.43:0,20,168	0/0:34,0:35:98:0,98,836	0/0:22,0:22:62.99:0,63,547	0/0:14,0:14:32.97:0,33,282	0/0:39,0:39:98.93:0,99,857	0/0:21,0:21:56.96:0,57,490	0/0:30,0:30:77.96:0,78,677	0/0:14,0:14:26.98:0,27,234	0/0:29,0:29:65.93:0,66,567	0/0:34,0:34:83.95:0,84,729	0/0:20,0:20:50.99:0,51,443	0/0:28,0:28:74.97:0,75,651	0/0:27,0:28:74.02:0,74,631	0/0:21,0:21:56.98:0,57,495	1/1:3,14:17:45.08:484,45,0	0/0:20,0:21:56.02:0,56,474	0/0:29,0:30:67.96:0,68,575	0/0:12,0:12:32.99:0,33,287	0/0:27,0:27:71.98:0,72,625	0/0:20,0:20:50.99:0,51,443	0/0:21,2:23:23.75:0,24,429	0/0:13,0:13:23.97:0,24,208	0/0:24,1:25:23.79:0,24,436	0/0:23,1:23:35.81:0,36,540	0/0:17,0:17:44.99:0,45,391
chr10	69443112	.	G	GTGTGTA	5687.34	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=-3.196;DP=628;FS=2.034;HRun=0;HaplotypeScore=145.7003;InbreedingCoeff=0.5266;MQ=53.81;MQ0=9;MQRankSum=-2.415;QD=21.87;ReadPosRankSum=1.624;VQSLOD=4.8380;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:22:8.27:0,8,69	0/0:7,0:7:21.02:0,21,327	0/0:34,0:19:39.03:0,39,455	0/0:40,0:20:38.17:0,38,569	0/0:11,0:10:2.78:0,3,24	0/0:22,0:22:51.10:0,51,906	0/0:20,0:20:54.13:0,54,980	0/1:41,0:40:55.80:56,0,464	0/0:29,0:29:35.03:0,35,1297	0/0:23,0:22:62.96:0,63,943	0/0:14,0:14:39.07:0,39,614	0/0:23,0:23:39.16:0,39,746	0/0:18,0:18:42.11:0,42,855	0/0:16,0:16:33.04:0,33,535	0/0:30,0:30:68.79:0,69,1166	0/0:29,0:29:74.85:0,75,1419	0/1:19,0:19:99:154,0,104	0/1:16,0:16:77.16:344,0,77	1/1:5,14:21:38.39:676,38,0	1/1:2,18:21:36.12:1192,36,0	1/1:3,34:40:12.03:338,12,0	0/0:17,0:17:45.07:0,45,747	0/1:22,0:22:39.37:39,0,102	0/1:22,0:22:53.97:119,0,54	0/0:10,0:10:24.05:0,24,445	1/1:1,28:31:28.31:1739,28,0	1/1:4,13:16:24.55:776,25,0	1/1:1,6:8:9.03:254,9,0
chr10	69443114	.	G	GTGTA	3016.77	PASS	AB=0.991;AC=13;AF=0.232;AN=56;BaseQRankSum=4.820;DP=628;FS=3.566;HRun=0;HaplotypeScore=120.6644;InbreedingCoeff=0.4094;MQ=52.73;MQ0=9;MQRankSum=-1.028;QD=13.78;ReadPosRankSum=2.444;VQSLOD=3.0448;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:21:8.08:0,8,69	0/0:7,0:7:21.01:0,21,275	0/0:34,0:19:45.05:0,45,503	0/0:41,0:20:3.20:0,3,450	0/0:11,0:10:2.89:0,3,24	0/0:20,0:20:51.10:0,51,758	0/0:21,0:21:57.12:0,57,856	0/1:40,0:39:96.25:96,0,506	0/0:27,0:28:57.35:0,57,1115	0/0:24,0:23:65.96:0,66,866	0/0:14,0:14:39.06:0,39,526	0/0:23,0:23:41.68:0,42,632	0/0:18,0:18:42.11:0,42,706	0/0:17,0:17:33.04:0,33,460	0/0:31,0:31:68.99:0,69,1012	0/0:28,0:28:75.01:0,75,1205	0/0:18,0:18:23.64:0,24,155	0/1:16,0:16:50.94:51,0,153	0/1:21,1:21:68.28:414,0,68	1/1:20,1:21:14.19:680,14,0	0/1:41,0:41:8.08:181,0,8	0/0:18,0:18:48.07:0,48,675	0/0:22,0:22:5:0,5,107	0/1:21,0:21:27.59:28,0,57	0/0:10,0:10:24.05:0,24,383	1/1:32,0:32:9.02:1061,9,0	1/1:17,1:16:24.08:479,24,0	1/1:7,1:8:9.03:195,9,0
chr10	69443320	.	AAAAAC	A	1522.25	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=7.672;DP=680;FS=3.414;HRun=0;HaplotypeScore=122.6897;InbreedingCoeff=0.9759;MQ=66.32;MQ0=0;MQRankSum=-1.541;QD=20.03;ReadPosRankSum=1.983;VQSLOD=3.5939;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:6,27:33:10.93:639,11,0	0/0:6,0:6:18.06:0,18,431	0/0:33,0:29:55.48:0,55,949	0/0:28,0:22:45.73:0,46,920	1/1:3,11:14:14.96:196,15,0	0/0:31,0:31:87.28:0,87,2193	0/0:20,0:20:48.48:0,48,1322	0/0:23,0:23:48.16:0,48,1030	0/0:28,0:28:78.24:0,78,1977	0/0:29,0:29:75.25:0,75,1876	0/0:30,0:30:84.29:0,84,2177	0/0:22,0:22:57.19:0,57,1492	0/0:25,0:25:63.22:0,63,1694	0/0:21,0:21:57.20:0,57,1556	0/0:37,0:37:90.31:0,90,2449	0/0:31,0:31:87.29:0,87,2243	1/1:3,26:29:42.14:823,42,0	0/0:29,0:29:75.15:0,75,1861	0/0:15,0:14:33.11:0,33,860	0/0:22,0:22:63.21:0,63,1581	0/0:9,0:9:24.06:0,24,562	0/0:27,0:27:69.24:0,69,1803	0/0:13,0:12:27.09:0,27,719	0/0:32,0:32:84.28:0,84,2073	0/0:26,0:26:66.08:0,66,1514	0/0:25,0:25:66.13:0,66,1624	0/0:30,0:29:78.25:0,78,1924	0/0:12,0:12:36.12:0,36,991
chr10	69444916	.	ATG	A	1849.68	PASS	AB=0.882;AC=14;AF=0.250;AN=56;BaseQRankSum=5.080;DP=844;FS=10.867;HRun=0;HaplotypeScore=119.3089;InbreedingCoeff=0.2020;MQ=58.18;MQ0=25;MQRankSum=1.729;QD=5.62;ReadPosRankSum=3.744;VQSLOD=2.5738;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:17,32:50:59.44:682,59,0	0/0:16,1:17:1.13:0,1,482	0/0:39,0:9:10.94:0,11,134	0/0:47,0:17:9.49:0,9,108	1/1:11,8:20:17.88:189,18,0	0/1:26,2:28:7.17:7,0,742	0/0:41,0:41:87.30:0,87,1354	0/0:26,0:41:38.17:0,38,255	0/0:30,0:31:65.80:0,66,964	0/1:27,2:27:12.76:13,0,740	0/1:15,2:17:30.87:31,0,432	0/1:23,2:25:17.07:17,0,675	0/1:27,2:29:9.79:10,0,751	0/0:33,3:36:34.22:0,34,977	0/0:30,1:33:16.19:0,16,674	0/1:34,3:37:38.75:39,0,825	1/1:9,32:40:51.28:743,51,0	0/1:11,9:22:20.10:232,0,20	0/0:10,0:18:10.52:0,11,205	0/0:7,0:24:36.59:0,37,302	0/0:23,0:56:56.98:0,57,515	0/1:21,3:25:56.09:56,0,403	0/0:9,0:20:7.89:0,8,35	0/0:27,0:38:14.98:0,15,159	0/0:13,0:13:30.08:0,30,444	0/0:9,0:23:44.61:0,45,383	0/0:11,0:21:18:0,18,158	0/0:4,0:7:15.02:0,15,169
chr10	69445042	.	T	TAAAAC	4183.30	PASS	AB=1.000;AC=20;AF=0.357;AN=56;BaseQRankSum=2.326;DP=720;FS=10.757;HRun=0;HaplotypeScore=157.7209;InbreedingCoeff=0.6835;MQ=62.52;MQ0=3;MQRankSum=-6.512;QD=12.41;ReadPosRankSum=-2.899;VQSLOD=2.1038;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:48,0:48:64.15:64,0,242	0/0:12,0:12:21.04:0,21,333	0/1:35,0:26:2.35:10,0,2	0/0:40,0:20:8.25:0,8,77	0/1:43,0:43:33.25:33,0,153	0/0:16,0:16:24.07:0,24,406	0/0:20,0:20:21.06:0,21,353	1/1:28,0:27:26.94:269,27,0	0/0:30,0:30:39.10:0,39,635	0/0:22,0:22:33.10:0,33,565	0/0:27,0:26:29.75:0,30,486	0/0:17,0:17:30.10:0,30,540	0/0:14,0:14:18.03:0,18,258	0/0:20,0:20:34.67:0,35,578	0/0:30,0:30:42.11:0,42,674	0/0:22,0:22:42.09:0,42,701	1/1:25,0:25:39.02:496,39,0	0/1:19,0:18:42.98:43,0,66	1/1:29,0:23:27.07:515,27,0	1/1:24,9:34:39.07:845,39,0	1/1:16,0:16:9.01:135,9,0	0/0:32,0:32:32.21:0,32,537	0/0:25,0:25:36.10:0,36,485	0/0:28,0:28:38.60:0,39,596	0/0:28,0:28:36.08:0,36,549	1/1:23,0:23:33.08:575,33,0	1/1:32,0:32:60.17:1085,60,0	1/1:5,0:5:6.02:112,6,0
chr10	69445072	.	CA	C	3869.52	PASS	AB=0.909;AC=21;AF=0.375;AN=56;BaseQRankSum=8.109;DP=691;FS=1.095;HRun=10;HaplotypeScore=106.6174;InbreedingCoeff=0.4393;MQ=55.85;MQ0=16;MQRankSum=-0.516;QD=10.40;ReadPosRankSum=0.149;VQSLOD=2.8440;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,41:50:99:1040,120,0	0/0:11,0:11:30.08:0,30,330	0/1:34,0:12:12.42:17,0,12	0/0:46,1:13:6.84:0,7,90	1/1:3,37:40:92.91:798,93,0	0/0:20,0:20:59.94:0,60,636	0/0:17,1:18:25.26:0,25,475	0/1:13,19:29:31.66:378,0,32	0/0:28,0:28:80.84:0,81,855	0/0:26,0:25:63.16:0,63,690	0/0:21,0:22:35.85:0,36,398	0/0:17,0:17:51.14:0,51,564	0/0:13,0:13:32.90:0,33,329	0/0:18,0:18:52.36:0,52,548	0/0:28,0:28:69.10:0,69,745	0/0:20,0:20:54.62:0,55,598	0/1:16,9:25:59.91:131,0,60	1/1:10,4:16:32.57:242,33,0	0/1:21,0:13:15.88:16,0,31	0/1:25,0:25:45.25:45,0,55	1/1:11,1:12:6.35:66,6,0	0/0:25,0:23:45.11:0,45,487	1/1:5,18:22:50.59:442,51,0	1/1:4,24:28:17.30:520,17,0	0/0:22,0:22:42.11:0,42,461	0/1:22,0:22:26.88:103,0,27	0/1:30,0:29:10.63:11,0,82	1/1:10,0:10:8.52:61,9,0
chr10	69445073	.	A	AAAAC	6223.96	PASS	AB=0.982;AC=23;AF=0.411;AN=56;BaseQRankSum=5.204;DP=690;FS=16.715;HRun=0;HaplotypeScore=137.9606;InbreedingCoeff=0.6332;MQ=54.97;MQ0=18;MQRankSum=-6.564;QD=16.91;ReadPosRankSum=-3.312;VQSLOD=2.9874;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:53,0:50:73.84:366,0,74	0/0:11,0:11:30.10:0,30,476	0/1:31,0:11:3.30:3,0,18	0/0:47,0:13:10.89:0,11,131	0/1:40,0:40:43.91:292,0,44	0/0:20,0:20:60.12:0,60,808	0/0:19,0:18:48.13:0,48,665	1/1:31,0:27:21.75:592,22,0	0/0:29,0:28:81.02:0,81,1125	0/0:27,0:26:66.19:0,66,944	0/0:23,0:22:41.47:0,41,636	0/0:19,0:18:51.16:0,51,794	0/0:15,0:14:36.03:0,36,461	0/0:18,0:18:52.69:0,53,808	0/0:29,0:29:78.16:0,78,1080	0/0:20,0:20:57.65:0,58,929	1/1:26,0:26:59.27:1077,59,0	1/1:18,0:16:8.47:210,8,0	1/1:13,7:12:36:633,36,0	1/1:17,7:24:38.78:741,39,0	1/1:11,1:12:18.83:186,19,0	0/0:24,0:22:47.30:0,47,726	0/1:21,0:20:99:106,0,259	0/1:27,0:28:99:166,0,351	0/0:21,0:21:51.12:0,51,745	1/1:19,3:22:14.66:578,15,0	1/1:23,7:29:73.85:1131,74,0	1/1:9,1:10:18.14:144,18,0
chr10	69445076	.	A	AC	1891.09	PASS	AB=0.995;AC=14;AF=0.250;AN=56;BaseQRankSum=11.783;DP=685;FS=2.385;HRun=0;HaplotypeScore=113.8965;InbreedingCoeff=0.3975;MQ=55.36;MQ0=18;MQRankSum=-1.701;QD=6.85;ReadPosRankSum=3.204;VQSLOD=3.7666;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:53,0:50:99:528,119,0	0/0:11,0:11:30.10:0,30,417	0/0:27,0:8:4.11:0,4,81	0/0:44,0:12:8.77:0,9,149	1/1:41,0:41:47.13:332,47,0	0/0:20,0:20:54.05:0,54,775	0/0:18,0:17:48.12:0,48,647	0/1:33,0:30:76.52:77,0,374	0/0:28,0:27:69.32:0,69,1035	0/0:28,0:27:75.21:0,75,974	0/0:25,0:24:47.86:0,48,610	0/0:22,0:21:57.17:0,57,765	0/0:15,0:14:35.83:0,36,437	0/0:19,0:19:52.71:0,53,682	0/0:27,0:27:78.70:0,79,1026	0/0:20,0:20:57.18:0,57,781	1/1:12,12:24:41.07:374,41,0	1/1:17,1:16:16.29:105,16,0	0/1:18,0:12:46.51:121,0,47	0/1:23,0:23:99:129,0,266	0/1:13,0:13:34.20:34,0,124	0/0:23,0:21:51.08:0,51,674	0/0:21,0:20:54.33:0,54,365	0/0:30,0:29:53.99:0,54,501	0/0:18,0:18:54.13:0,54,687	0/1:22,0:22:71.91:72,0,319	0/1:30,1:30:99:298,0,239	0/0:13,0:13:16.25:0,16,257
chr10	69445078	.	A	AAAC	913.35	PASS	AB=0.989;AC=11;AF=0.196;AN=56;BaseQRankSum=9.971;DP=673;FS=0.427;HRun=0;HaplotypeScore=141.6300;InbreedingCoeff=0.4473;MQ=55.40;MQ0=18;MQRankSum=-1.811;QD=3.95;ReadPosRankSum=1.751;VQSLOD=2.7007;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:51,0:48:12.99:111,13,0	0/0:12,0:12:30.10:0,30,461	0/1:28,0:9:0.68:1,0,82	0/0:43,0:12:23.43:0,23,243	1/1:41,0:41:17.94:115,18,0	0/0:21,0:21:59.92:0,60,897	0/0:18,0:17:26.22:0,26,721	0/0:31,0:28:81.86:0,82,717	0/0:28,0:27:80.73:0,81,1215	0/0:28,0:27:75.21:0,75,1091	0/0:26,0:25:44.60:0,45,652	0/0:22,0:21:63.18:0,63,918	0/0:14,0:13:38.77:0,39,503	0/0:20,0:20:58.41:0,58,824	0/0:25,0:25:72.15:0,72,1095	0/0:19,0:19:54.66:0,55,867	1/1:11,12:24:46.06:686,46,0	0/1:17,1:16:47.58:54,0,48	0/1:15,0:12:38.99:39,0,55	0/1:24,0:24:27.99:28,0,360	0/0:13,0:13:12.07:0,12,200	0/0:23,0:21:47.45:0,47,721	0/0:19,0:18:51.52:0,52,467	0/0:31,0:30:78.01:0,78,724	0/0:16,0:16:48.15:0,48,716	0/0:19,0:20:9.97:0,10,396	0/1:30,0:29:39.42:39,0,364	0/0:13,0:13:25.33:0,25,336
chr10	69445083	.	C	CA	2413.91	PASS	AB=1.000;AC=16;AF=0.286;AN=56;BaseQRankSum=7.151;DP=690;FS=6.880;HRun=10;HaplotypeScore=112.7162;InbreedingCoeff=0.8424;MQ=54.84;MQ0=17;MQRankSum=-6.927;QD=11.89;ReadPosRankSum=-1.797;VQSLOD=2.5255;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:48:99:0,129,1158	0/0:11,0:11:20.90:0,21,192	0/1:28,0:10:19.08:19,0,73	0/1:42,0:12:5.58:6,0,135	0/0:42,0:42:99:0,102,891	0/0:21,0:21:60.03:0,60,549	0/0:19,0:18:48:0,48,431	0/0:30,0:27:65.21:0,65,579	0/0:29,0:28:71.84:0,72,627	0/0:29,0:28:65.82:0,66,589	0/0:25,0:24:38.65:0,39,356	0/0:24,0:23:60.02:0,60,548	0/0:14,0:13:32.94:0,33,289	0/0:21,0:21:45:0,45,411	0/0:24,0:24:62.71:0,63,559	0/0:21,0:21:59.93:0,60,536	0/0:26,0:26:61.73:0,62,541	1/1:17,0:15:30.77:152,31,0	1/1:8,8:14:36.05:374,36,0	1/1:18,7:25:61.28:562,61,0	1/1:12,1:13:26.50:230,26,0	0/0:22,1:22:45.68:0,46,409	0/0:22,0:21:53.62:0,54,487	0/0:34,0:33:81.25:0,81,780	0/0:21,0:21:28.44:0,28,415	1/1:18,3:21:30.41:426,30,0	1/1:19,6:24:56.29:450,56,0	1/1:15,1:16:41.73:396,42,0
chr10	69445087	.	A	AC	555.43	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=8.024;DP=693;FS=5.455;HRun=0;HaplotypeScore=119.8686;InbreedingCoeff=0.3373;MQ=55.89;MQ0=15;MQRankSum=-5.838;QD=4.21;ReadPosRankSum=-1.281;VQSLOD=2.7965;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:51:99:0,141,1897	0/0:10,0:10:27.07:0,27,345	0/0:30,0:12:22.76:0,23,199	0/0:41,0:12:32.78:0,33,342	0/0:41,0:41:99:0,105,1415	0/0:21,0:21:63.20:0,63,858	0/0:20,0:19:57.15:0,57,746	0/0:29,0:26:76.44:0,76,989	0/0:28,0:27:78.22:0,78,1049	0/0:29,0:28:78.24:0,78,1032	0/0:24,0:23:47.87:0,48,622	0/0:23,0:22:66.20:0,66,891	0/0:18,0:17:45.10:0,45,560	0/0:20,0:20:57.15:0,57,733	0/0:24,0:24:72.18:0,72,947	0/0:21,0:21:63.20:0,63,858	0/0:27,0:27:71.09:0,71,805	1/1:9,8:15:38.06:405,38,0	1/1:16,0:14:22.41:101,22,0	0/1:25,0:25:66.81:67,0,94	0/1:13,0:13:26.56:27,0,38	0/0:24,0:24:50.48:0,50,678	0/0:23,0:22:60.22:0,60,785	0/0:35,0:34:92.07:0,92,1239	0/0:20,0:20:58.99:0,59,758	0/1:21,0:21:24.76:25,0,73	0/1:23,0:22:34.15:50,0,34	0/1:17,0:17:26.97:34,0,27
chr10	69446581	.	TA	T	5892.69	PASS	AB=0.600;AC=25;AF=0.446;AN=56;BaseQRankSum=9.739;DP=593;FS=0.000;HRun=11;HaplotypeScore=65.4563;InbreedingCoeff=0.9364;MQ=67.76;MQ0=0;MQRankSum=-0.213;QD=19.64;ReadPosRankSum=2.785;VQSLOD=5.8188;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,41:47:99:885,108,0	0/0:12,0:12:33.03:0,33,332	0/0:17,0:17:19.46:0,19,199	0/0:9,0:10:15.08:0,15,102	1/1:1,30:31:89.90:739,90,0	0/0:16,0:16:42.11:0,42,447	0/0:21,0:21:27.12:0,27,481	1/1:5,14:19:38.93:320,39,0	0/0:12,0:12:30.07:0,30,317	0/0:31,0:32:72.05:0,72,750	0/0:19,1:20:29.48:0,29,510	0/0:24,0:24:66.10:0,66,672	0/0:16,0:16:39.08:0,39,408	0/0:19,0:19:51.13:0,51,541	0/0:21,0:21:57.11:0,57,595	0/0:23,1:24:41.52:0,42,647	1/1:4,20:24:53.92:443,54,0	1/1:2,14:17:40.99:326,41,0	0/1:4,8:12:5.04:168,0,5	1/1:1,24:25:67.94:547,68,0	1/1:1,14:15:38.95:320,39,0	0/0:18,3:21:10.92:0,11,423	1/1:3,18:21:50.93:418,51,0	1/1:1,20:21:47.94:394,48,0	0/0:27,1:28:59.50:0,60,805	1/1:5,28:34:79.90:642,80,0	1/1:2,17:19:47.92:394,48,0	1/1:3,12:15:35.91:295,36,0
chr10	69447343	.	ATTT	A	3230.05	PASS	AB=0.586;AC=18;AF=0.321;AN=56;BaseQRankSum=1.531;DP=561;FS=0.417;HRun=16;HaplotypeScore=92.3751;InbreedingCoeff=0.8050;MQ=72.36;MQ0=1;MQRankSum=-3.053;QD=14.89;ReadPosRankSum=5.003;VQSLOD=2.1892;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:8,1:19:7.08:7,0,103	0/0:9,0:10:21.05:0,21,318	0/0:28,0:20:28.55:0,29,268	0/0:19,0:11:13.55:0,14,143	0/0:7,0:31:37.26:0,37,200	0/0:16,0:24:60.03:0,60,737	0/0:11,0:12:24.08:0,24,411	0/0:26,0:30:54.37:0,54,746	0/0:9,0:11:33.07:0,33,493	0/0:13,0:17:39.06:0,39,533	0/0:16,0:20:42.09:0,42,608	0/0:13,0:15:39.07:0,39,552	0/0:13,0:18:39.12:0,39,615	0/0:17,0:20:54.16:0,54,835	0/0:13,0:17:45.07:0,45,667	0/0:15,0:15:30.10:0,30,524	1/1:2,22:27:32.24:582,32,0	1/1:5,12:18:0.77:231,1,0	1/1:10,8:19:25.25:276,25,0	1/1:5,22:32:26.24:577,26,0	1/1:6,11:17:26.70:290,27,0	0/0:16,0:19:43.35:0,43,648	0/0:7,0:17:13.85:0,14,49	0/1:2,1:14:12.09:12,0,68	0/0:18,0:19:43.39:0,43,695	1/1:8,15:23:38.80:419,39,0	1/1:8,21:29:59.17:619,59,0	1/1:1,17:19:37.56:417,38,0
chr10	69447796	.	TA	T	923.89	PASS	AB=0.571;AC=11;AF=0.196;AN=56;BaseQRankSum=0.592;DP=475;FS=1.087;HRun=3;HaplotypeScore=68.1534;InbreedingCoeff=0.8960;MQ=71.39;MQ0=3;MQRankSum=2.141;QD=10.50;ReadPosRankSum=-1.613;VQSLOD=0.8980;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:45.23:0,45,416	0/0:6,0:6:18.02:0,18,192	0/0:26,0:19:32.69:0,33,382	0/0:13,0:12:22.15:0,22,166	0/0:19,0:19:32.34:0,32,258	0/0:11,0:9:17.94:0,18,122	0/0:18,0:18:44.44:0,44,445	0/0:13,0:13:35.93:0,36,328	0/0:12,0:12:36.03:0,36,382	0/0:18,0:18:27.71:0,28,232	0/0:9,0:9:17.78:0,18,174	0/0:18,0:18:27.30:0,27,308	0/0:11,0:11:27.39:0,27,292	0/0:11,0:11:30.06:0,30,351	0/0:27,0:27:75:0,75,808	0/0:22,0:22:57.13:0,57,680	0/0:30,0:29:66.51:0,67,398	0/0:21,0:20:43.66:0,44,268	1/1:15,0:16:38.81:297,39,0	1/1:10,3:13:24.52:175,25,0	0/1:5,15:20:0:0,0,0	0/0:14,0:14:23.12:0,23,190	0/0:19,0:19:22.82:0,23,161	0/0:24,0:24:52.46:0,52,323	0/0:7,0:7:1.57:0,2,41	1/1:4,10:14:22.84:171,23,0	1/1:18,2:20:51.32:379,51,0	1/1:0,5:5:8.86:71,9,0
chr10	69447798	.	AAC	A	1219.40	PASS	AB=0.964;AC=16;AF=0.286;AN=56;BaseQRankSum=7.740;DP=458;FS=29.612;HRun=0;HaplotypeScore=68.1739;InbreedingCoeff=0.2964;MQ=70.50;MQ0=3;MQRankSum=2.576;QD=5.37;ReadPosRankSum=6.184;VQSLOD=0.9803;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:29,1:31:62.87:63,0,235	0/0:6,0:6:18.04:0,18,256	0/0:25,0:17:31.28:0,31,504	0/0:13,0:12:25.97:0,26,265	0/1:16,3:19:99:112,0,140	0/0:11,0:9:23.91:0,24,210	0/0:19,0:19:47.91:0,48,600	0/0:13,0:13:36.02:0,36,404	0/0:12,0:12:36.04:0,36,482	0/0:16,0:16:27.92:0,28,294	0/0:8,0:8:21.05:0,21,293	0/0:17,0:17:39.75:0,40,446	0/0:11,0:11:32.98:0,33,423	0/0:11,0:11:30.10:0,30,496	0/0:28,0:28:78.07:0,78,1092	0/0:22,0:22:57.17:0,57,955	0/1:29,0:28:82.06:84,0,82	0/1:20,0:19:42.15:42,0,55	1/1:2,13:15:38.86:343,39,0	1/1:13,0:13:24.46:176,24,0	0/1:20,0:20:0.02:0,0,0	0/0:12,0:12:4.09:0,4,231	0/1:19,0:19:53.81:98,0,54	0/1:24,0:24:51.66:52,0,62	0/0:7,0:7:14.95:0,15,134	1/1:12,0:12:22.48:171,22,0	0/1:18,2:20:19.57:232,0,20	1/1:5,0:5:2.79:20,3,0
chr10	69447799	.	ACC	A	2055.49	PASS	AB=0.962;AC=16;AF=0.286;AN=56;BaseQRankSum=1.761;DP=447;FS=33.857;HRun=12;HaplotypeScore=64.5146;InbreedingCoeff=0.6809;MQ=69.33;MQ0=3;MQRankSum=-0.239;QD=11.11;ReadPosRankSum=7.915;VQSLOD=-0.6134;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:12,17:30:35.67:333,36,0	0/0:6,0:6:12.02:0,12,139	0/0:24,0:16:35.87:0,36,358	0/0:12,0:11:20.49:0,20,100	1/1:9,8:19:29.97:293,30,0	0/0:9,0:10:14.42:0,14,98	0/0:19,1:20:2.53:0,3,332	0/0:12,0:12:15.01:0,15,164	0/0:12,0:12:18.06:0,18,245	0/0:14,0:14:11.65:0,12,148	0/0:7,0:7:18.06:0,18,256	0/0:17,0:17:25.32:0,25,263	0/0:11,0:12:20.54:0,21,252	0/0:11,0:11:30.06:0,30,377	0/0:26,0:27:48.14:0,48,672	0/0:20,0:22:48.13:0,48,649	1/1:4,24:27:37.35:529,37,0	1/1:5,14:18:33.04:334,33,0	1/1:15,0:15:5.88:41,6,0	0/0:11,0:11:0:0,0,0	0/0:20,0:20:0.45:0,0,1	0/1:11,1:12:15.31:15,0,116	1/1:4,13:18:16.37:259,16,0	1/1:6,16:25:44.56:420,45,0	0/0:6,0:6:11.48:0,11,116	0/0:12,0:12:0:0,0,0	0/1:19,0:19:15.37:15,0,200	0/0:5,0:5:5.95:0,6,42
chr10	69449235	.	GCTGCATACCATGGGTTAGTGCCCA	G	2419.56	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=7.857;DP=709;FS=21.253;HRun=0;HaplotypeScore=420.2842;InbreedingCoeff=0.8602;MQ=75.95;MQ0=0;MQRankSum=0.647;QD=17.28;ReadPosRankSum=0.423;VQSLOD=0.6609;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,99,3786	0/0:7,0:7:12.03:0,12,326	0/0:30,0:30:13.88:0,14,248	0/0:19,0:18:20.04:0,20,421	0/0:23,0:23:42.07:0,42,1688	0/0:31,0:31:72.18:0,72,3407	0/0:31,0:31:51.11:0,51,1875	0/0:33,0:33:42.09:0,42,871	0/0:27,0:27:57.16:0,57,3059	0/0:25,0:25:60.16:0,60,2421	0/0:11,0:11:24.07:0,24,857	0/0:29,0:29:45.13:0,45,2238	0/0:25,0:25:60.16:0,60,2382	0/0:26,0:26:57.18:0,57,2507	0/0:37,0:37:72.22:0,72,3548	0/0:28,0:28:60.19:0,60,2679	0/0:34,0:34:72.19:0,72,3554	0/1:31,0:31:22.68:23,0,3813	1/1:7,6:11:13.18:131,13,0	1/1:5,12:17:17.91:157,18,0	1/1:35,0:34:47.96:694,48,0	0/0:32,0:32:69.21:0,69,3236	0/0:13,0:13:18.06:0,18,898	0/0:36,0:36:90.27:0,90,4502	0/0:27,0:27:42.12:0,42,1754	1/1:5,18:23:50.99:657,51,0	1/1:18,0:18:30.06:705,30,0	1/1:3,0:3:6.02:237,6,0
chr10	69449883	.	G	GTC	1390.09	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-7.826;DP=495;FS=0.720;HRun=0;HaplotypeScore=66.2551;InbreedingCoeff=0.9605;MQ=88.32;MQ0=0;MQRankSum=-3.413;QD=38.61;ReadPosRankSum=0.045;VQSLOD=5.3992;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:84.22:0,84,1120	0/0:6,0:6:15.05:0,15,208	0/0:25,0:25:65.53:0,66,827	0/0:28,0:27:62.18:0,62,848	0/0:20,0:20:57.13:0,57,741	0/0:21,0:21:59.99:0,60,810	0/0:18,0:18:51.14:0,51,676	0/0:14,0:13:42.13:0,42,569	0/0:15,0:15:36.09:0,36,469	0/0:28,0:28:78.25:0,78,1070	0/0:18,0:18:51.14:0,51,678	0/0:16,0:16:42.07:0,42,564	0/0:21,0:21:60.18:0,60,818	0/0:16,0:16:48.15:0,48,655	0/0:18,0:18:51.16:0,51,696	0/0:13,0:13:33.11:0,33,461	0/0:22,0:22:54.18:0,54,755	0/0:15,0:15:39.13:0,39,542	0/0:16,0:16:36.05:0,36,479	0/0:10,0:10:30.09:0,30,402	0/0:18,0:18:54.11:0,54,676	0/0:21,0:21:60.17:0,60,803	1/1:0,10:11:24.08:432,24,0	1/1:2,23:25:60.21:1079,60,0	0/0:17,0:17:48.14:0,48,639	0/0:10,0:10:24.08:0,24,336	0/0:19,0:19:51.14:0,51,678	0/0:5,0:5:9.03:0,9,126
chr10	69452989	.	GCAGTGATCCT	G	3005.21	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.414;DP=670;FS=1.379;HRun=0;HaplotypeScore=208.7889;InbreedingCoeff=0.9979;MQ=86.82;MQ0=0;MQRankSum=-9.670;QD=58.93;ReadPosRankSum=-0.069;VQSLOD=3.3675;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,25:31:57.20:1791,57,0	0/0:17,0:17:51.18:0,51,2721	0/0:30,0:30:90.26:0,90,4037	0/0:21,0:21:57.20:0,57,2762	1/1:1,19:20:45.11:1336,45,0	0/0:17,0:17:51.18:0,51,2539	0/0:30,0:30:90.31:0,90,4529	0/0:24,0:24:66.22:0,66,3257	0/0:24,0:24:69.24:0,69,3670	0/0:29,0:29:78.27:0,78,3939	0/0:14,0:14:42.14:0,42,1890	0/0:24,0:24:69.24:0,69,3417	0/0:22,0:22:66.23:0,66,3447	0/0:30,0:30:78.27:0,78,3915	0/0:36,0:36:99:0,108,5516	0/0:18,0:18:54.19:0,54,2883	0/0:42,0:42:99:0,126,6625	0/0:24,0:24:72.25:0,72,3818	0/0:17,0:17:51.18:0,51,2278	0/0:18,0:18:54.19:0,54,2674	0/0:33,0:33:96.30:0,96,4602	0/0:25,0:25:72.25:0,72,3674	0/0:17,0:17:42.14:0,42,2241	0/0:35,0:35:99:0,105,5369	0/0:21,0:21:57.20:0,57,2994	0/0:20,0:20:60.20:0,60,3010	0/0:24,0:24:72.25:0,72,3621	0/0:7,0:7:21.07:0,21,1121
chr10	69453488	.	CAAA	C	5208.75	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=11.872;DP=675;FS=0.000;HRun=3;HaplotypeScore=98.2343;InbreedingCoeff=0.9994;MQ=76.73;MQ0=0;MQRankSum=-3.023;QD=46.51;ReadPosRankSum=3.113;VQSLOD=4.3357;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,41:41:96.29:1753,96,0	0/0:13,0:13:39.13:0,39,961	0/0:20,0:20:54.01:0,54,1198	0/0:10,0:10:27:0,27,555	1/1:0,16:16:45.15:827,45,0	0/0:15,0:15:45.15:0,45,1110	0/0:20,0:20:60.18:0,60,1428	0/0:35,0:35:99:0,105,2579	0/0:18,0:18:54.17:0,54,1283	0/0:34,0:34:99:0,102,2447	0/0:24,0:24:69.24:0,69,1701	0/0:29,0:29:87.30:0,87,2142	0/0:29,0:29:87.30:0,87,2148	0/0:24,0:24:72.25:0,72,1774	0/0:36,0:36:99:0,108,2620	0/0:25,0:25:75.26:0,75,1851	1/1:0,33:33:81.28:1510,81,0	1/1:0,22:22:60.21:1119,60,0	0/0:20,0:20:60.21:0,60,1479	0/0:23,0:23:66.23:0,66,1626	0/0:35,0:35:99:0,105,2564	0/0:26,0:26:78.27:0,78,1923	0/0:13,0:13:39.09:0,39,870	0/0:25,0:25:75.26:0,75,1848	0/0:26,0:26:78.27:0,78,1919	0/0:31,0:31:93.32:0,93,2250	0/0:23,0:23:69.24:0,69,1676	0/0:9,0:9:27.09:0,27,665
chr10	69455352	.	T	TA	2134.62	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=-8.919;DP=713;FS=6.097;HRun=7;HaplotypeScore=63.5868;InbreedingCoeff=0.9987;MQ=84.25;MQ0=0;MQRankSum=-4.094;QD=26.68;ReadPosRankSum=0.604;VQSLOD=4.4032;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,24:29:37.23:732,37,0	0/0:11,0:11:33.04:0,33,313	0/0:22,0:22:22.98:0,23,355	0/0:22,0:22:46.55:0,47,474	1/1:3,29:32:87.14:1002,87,0	0/0:26,0:26:66.09:0,66,633	0/0:19,0:19:57.05:0,57,537	0/0:41,0:41:99:0,114,1093	0/0:25,0:25:72.11:0,72,691	0/0:32,0:32:84.13:0,84,808	0/0:19,0:19:51.08:0,51,492	0/0:23,0:23:66.10:0,66,637	0/0:31,0:31:87.13:0,87,835	0/0:21,0:21:63.10:0,63,608	0/0:28,0:28:78.10:0,78,747	0/0:40,0:40:99:0,108,1022	0/0:15,0:15:45.06:0,45,430	1/1:1,18:19:45.14:544,45,0	0/0:20,0:20:48.07:0,48,463	0/0:23,0:23:66.10:0,66,637	0/0:30,0:30:84.13:0,84,811	0/0:32,0:32:90.14:0,90,869	0/0:26,0:26:75.10:0,75,715	0/0:27,0:27:75.12:0,75,724	0/0:29,0:29:84.11:0,84,804	0/0:31,0:31:87.14:0,87,840	0/0:30,0:30:84.12:0,84,805	0/0:10,0:10:30:0,30,279
chr10	69458282	.	GT	G	4675.23	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=11.941;DP=709;FS=2.571;HRun=4;HaplotypeScore=67.7749;InbreedingCoeff=0.9996;MQ=80.27;MQ0=1;MQRankSum=-2.778;QD=32.69;ReadPosRankSum=3.807;VQSLOD=5.5700;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,52:52:99:1728,144,0	0/0:12,0:12:30.10:0,30,419	0/0:32,0:32:49.15:0,49,1103	0/0:27,0:27:75.01:0,75,952	1/1:2,25:27:72.22:860,72,0	0/0:29,0:29:87.28:0,87,1203	0/0:24,0:24:69.22:0,69,950	0/0:29,0:29:84.28:0,84,1176	0/0:21,0:21:57.18:0,57,782	0/0:25,0:25:69.22:0,69,952	0/0:26,0:26:75.25:0,75,1037	0/0:19,0:19:54.17:0,54,739	0/0:33,0:33:96.32:0,96,1342	0/0:23,0:23:63.17:0,63,812	0/0:21,0:21:63.20:0,63,852	0/0:17,0:17:51.17:0,51,714	1/1:2,28:30:78.24:936,78,0	1/1:0,34:34:96.29:1152,96,0	0/0:23,0:23:60.18:0,60,808	0/0:29,0:29:78.26:0,78,1089	0/0:31,0:31:84.26:0,84,1158	0/0:19,0:19:54.17:0,54,740	0/0:16,0:15:45.15:0,45,630	0/0:34,0:34:96.32:0,96,1344	0/0:17,0:17:48.14:0,48,637	0/0:22,0:22:60.20:0,60,840	0/0:28,0:28:81.27:0,81,1133	0/0:9,0:9:27.08:0,27,361
chr10	69459591	.	GTT	G	1032.61	PASS	AB=0.767;AC=8;AF=0.143;AN=56;BaseQRankSum=7.565;DP=641;FS=2.924;HRun=15;HaplotypeScore=96.3057;InbreedingCoeff=0.6849;MQ=73.24;MQ0=1;MQRankSum=-0.720;QD=9.14;ReadPosRankSum=5.508;VQSLOD=2.0260;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:13,16:30:7.56:410,0,8	0/0:6,0:7:17.47:0,17,174	0/1:14,1:14:11.06:11,0,110	0/0:20,0:16:17.17:0,17,134	1/1:7,10:20:16.02:216,16,0	0/0:10,0:13:29.05:0,29,315	0/0:24,0:31:76.64:0,77,871	0/0:26,0:35:75.49:0,75,754	0/0:24,0:28:43.03:0,43,543	0/0:19,1:27:32.09:0,32,516	0/0:16,0:18:38.61:0,39,483	0/0:28,0:30:75.80:0,76,881	0/0:27,0:28:44.93:0,45,803	0/0:29,0:30:39.39:0,39,748	0/0:34,0:35:86.75:0,87,1114	0/0:24,0:30:56.04:0,56,682	1/1:4,15:22:38.26:358,38,0	1/1:5,0:24:43.84:188,44,0	0/0:23,0:24:40.54:0,41,400	0/0:12,0:23:61.19:0,61,624	0/0:3,0:10:9.87:0,10,95	0/0:21,0:23:53.12:0,53,634	0/0:13,0:14:35.53:0,36,391	0/0:24,0:24:69.23:0,69,934	0/0:21,0:22:57.12:0,57,693	0/0:18,0:27:67.76:0,68,681	0/0:7,0:19:20.08:0,20,196	0/0:0,0:9:3:0,3,29
chr10	69462217	.	TC	T	49.38	PASS	AB=0.700;AC=1;AF=0.018;AN=56;BaseQRankSum=5.295;DP=603;FS=0.000;HRun=1;HaplotypeScore=74.3116;InbreedingCoeff=0.0045;MQ=64.01;MQ0=1;MQRankSum=-5.013;QD=3.53;ReadPosRankSum=-1.871;VQSLOD=-0.6494;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:74.71:0,75,900	0/0:9,0:9:27.06:0,27,389	0/0:21,0:15:38.27:0,38,456	0/0:20,0:14:8.60:0,9,420	0/0:28,0:28:63.83:0,64,788	0/0:13,0:13:39.13:0,39,597	0/0:23,0:23:69.23:0,69,1043	0/0:27,0:26:37.35:0,37,815	0/0:17,0:17:51.16:0,51,755	0/0:31,0:30:90.30:0,90,1357	0/0:19,0:19:57.19:0,57,865	0/0:24,0:24:72.19:0,72,1014	0/0:16,0:16:48.15:0,48,703	0/0:22,0:22:66.21:0,66,985	0/0:18,0:18:51.17:0,51,777	0/0:20,0:20:60.12:0,60,825	0/0:34,0:33:72.11:0,72,982	0/1:8,6:14:18.45:124,0,18	0/0:28,0:27:81.24:0,81,1186	0/0:22,0:22:66.22:0,66,1009	0/0:19,0:19:57.17:0,57,850	0/0:13,0:13:39.12:0,39,565	0/0:20,0:20:60.20:0,60,918	0/0:30,0:30:90.27:0,90,1309	0/0:25,0:25:75.24:0,75,1118	0/0:19,0:19:57.18:0,57,830	0/0:29,0:29:87.23:0,87,1250	0/0:11,0:11:30.10:0,30,451
chr10	69462219	.	TTTC	T	131.36	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.197;DP=606;FS=1.008;HRun=0;HaplotypeScore=98.0485;InbreedingCoeff=0.8070;MQ=62.20;MQ0=1;MQRankSum=-3.671;QD=10.10;ReadPosRankSum=-2.323;VQSLOD=2.9222;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:20.62:0,21,411	0/0:10,0:10:30.09:0,30,552	0/0:19,0:13:22.81:0,23,430	0/0:22,0:15:39.04:0,39,592	0/0:30,0:30:2.22:0,2,443	0/0:13,0:13:39.12:0,39,771	0/0:23,0:23:69.11:0,69,1256	0/0:26,0:25:15.67:0,16,544	0/0:16,0:16:48.16:0,48,989	0/0:30,0:29:87.01:0,87,1632	0/0:19,0:19:54.16:0,54,1045	0/0:22,0:22:63.20:0,63,1268	0/0:17,0:17:48.12:0,48,840	0/0:22,0:22:66.15:0,66,1177	0/0:18,0:18:54.14:0,54,989	0/0:19,0:19:51.15:0,51,1005	0/0:33,0:32:64.39:0,64,848	1/1:8,5:13:15.84:220,16,0	0/0:29,0:28:81.19:0,81,1416	0/0:22,0:22:66.17:0,66,1276	0/0:19,0:19:57.19:0,57,1182	0/0:13,0:13:38.70:0,39,689	0/0:21,0:21:63.21:0,63,1310	0/0:31,0:31:84.24:0,84,1596	0/0:25,0:25:75.21:0,75,1416	0/0:19,0:19:54.14:0,54,956	0/0:31,0:31:93.26:0,93,1702	0/0:13,0:13:39.09:0,39,649
chr10	69462222	.	C	CTTT	1639.52	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=5.056;DP=598;FS=0.598;HRun=8;HaplotypeScore=93.2102;InbreedingCoeff=0.7604;MQ=60.60;MQ0=1;MQRankSum=-3.184;QD=20.49;ReadPosRankSum=-1.152;VQSLOD=0.8413;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:45.19:0,45,303	0/0:10,0:10:30.03:0,30,352	0/0:17,0:11:25.16:0,25,258	0/1:23,0:16:13.70:14,0,297	0/0:28,0:28:9.30:0,9,248	0/0:14,0:14:33.08:0,33,434	0/0:22,0:22:63.10:0,63,754	1/1:11,14:24:49.89:690,50,0	0/0:18,0:18:51.14:0,51,648	0/0:31,0:30:78.20:0,78,954	0/0:19,0:19:45.09:0,45,571	0/0:22,0:22:63.15:0,63,774	0/0:16,0:16:42.11:0,42,519	0/0:22,0:22:54.15:0,54,690	0/0:18,0:18:45.12:0,45,584	0/0:17,0:17:51.16:0,51,660	1/1:4,17:31:57.17:1064,57,0	0/0:11,0:11:13.40:0,13,42	0/0:27,0:25:72.16:0,72,870	0/0:23,0:23:51.11:0,51,662	0/0:19,0:19:57.17:0,57,731	0/0:12,0:12:33.07:0,33,395	0/0:22,0:22:66.16:0,66,808	0/0:30,0:30:84.18:0,84,1022	0/0:27,0:27:75.20:0,75,947	0/0:20,0:20:45.07:0,45,567	0/0:32,0:32:93.22:0,93,1154	0/0:13,0:13:38.99:0,39,449
chr10	69462231	.	C	CT	1808.17	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=12.318;DP=580;FS=1.627;HRun=8;HaplotypeScore=66.0201;InbreedingCoeff=0.9911;MQ=60.45;MQ0=4;MQRankSum=-1.368;QD=16.59;ReadPosRankSum=0.544;VQSLOD=3.7387;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,22:25:42.13:507,42,0	0/0:10,0:10:30.05:0,30,289	0/0:16,0:10:14.91:0,15,134	0/0:24,0:16:15.37:0,15,179	1/1:5,21:27:45.13:532,45,0	0/0:12,0:12:36.06:0,36,347	0/0:22,0:22:51.08:0,51,492	1/1:12,1:18:24.10:154,24,0	0/0:18,0:18:48.06:0,48,458	0/0:28,0:27:66.08:0,66,634	0/0:17,0:17:36.05:0,36,347	0/0:23,0:22:51.08:0,51,492	0/0:17,0:17:45.07:0,45,434	0/0:17,0:17:45.07:0,45,435	0/0:17,0:17:48.06:0,48,458	0/0:17,0:17:45.07:0,45,435	1/1:12,16:27:51.53:574,52,0	1/1:2,8:10:20.98:217,21,0	0/0:27,0:25:66.07:0,66,624	0/0:20,0:20:57.09:0,57,550	0/0:21,0:21:54.03:0,54,506	0/0:14,0:14:33.03:0,33,312	0/0:23,0:23:63.10:0,63,608	0/0:29,0:29:52.41:0,52,699	0/0:29,0:29:84.10:0,84,795	0/0:21,0:21:48.06:0,48,463	0/0:34,0:34:93.11:0,93,887	0/0:15,0:15:45.07:0,45,434
chr10	69463162	.	G	GCTTCC	7381.59	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=-7.627;DP=676;FS=12.343;HRun=0;HaplotypeScore=127.7901;InbreedingCoeff=0.9989;MQ=85.45;MQ0=0;MQRankSum=-8.115;QD=73.82;ReadPosRankSum=1.876;VQSLOD=6.4854;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,21:22:51.18:1576,51,0	0/0:15,0:15:42.14:0,42,908	0/0:27,0:27:75.19:0,75,1457	0/0:18,0:18:37.28:0,37,894	1/1:3,26:30:66.12:1899,66,0	0/0:17,0:17:51.18:0,51,1078	0/0:21,0:21:63.20:0,63,1327	1/1:1,12:15:39.12:1149,39,0	0/0:28,0:28:84.29:0,84,1822	0/0:24,0:24:69.22:0,69,1414	0/0:26,0:26:75.24:0,75,1586	0/0:28,0:28:81.28:0,81,1757	0/0:30,0:30:90.30:0,90,1878	0/0:23,0:23:66.23:0,66,1411	0/0:33,0:33:90.29:0,90,1913	0/0:29,0:29:81.25:0,81,1660	1/1:0,13:13:30.10:950,30,0	1/1:1,19:20:57.20:1807,57,0	0/0:20,0:20:57.20:0,57,1227	0/0:34,0:34:99:0,102,2214	0/0:25,0:25:75.21:0,75,1537	0/0:29,0:29:84.27:0,84,1764	0/0:27,0:27:81.26:0,81,1715	0/0:22,0:22:66.21:0,66,1392	0/0:28,0:28:84.23:0,84,1738	0/0:23,0:23:66.22:0,66,1391	0/0:42,0:42:99:0,120,2588	0/0:7,0:7:21:0,21,329
chr10	69465426	.	AGT	A	346.31	PASS	AB=0.985;AC=15;AF=0.300;AN=50;BaseQRankSum=3.165;DP=528;FS=0.851;HRun=0;HaplotypeScore=113.8802;InbreedingCoeff=0.3686;MQ=57.51;MQ0=21;MQRankSum=3.224;QD=1.71;ReadPosRankSum=1.111;VQSLOD=2.3130;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:21,0:20:2.98:23,3,0	0/1:19,0:19:2:2,0,249	./.	./.	1/1:21,0:21:8.64:54,9,0	0/1:18,0:18:12.02:12,0,198	0/0:19,0:19:18.06:0,18,252	0/0:30,0:25:13.02:0,13,77	0/1:18,0:18:3.04:3,0,206	0/0:22,0:22:24.90:0,25,295	0/0:9,0:9:9.03:0,9,134	0/0:23,0:20:24.07:0,24,321	0/1:11,1:12:24.44:24,0,47	0/1:27,0:27:85.08:85,0,117	1/1:13,9:23:8.90:99,9,0	0/0:29,0:29:25.89:0,26,237	0/0:19,0:18:13.14:0,13,89	0/0:16,0:13:6.94:0,7,58	0/0:12,0:12:2.50:0,2,20	./.	0/0:20,0:17:3:0,3,25	0/0:18,0:17:15.70:0,16,228	0/0:5,0:7:0:0,0,0	1/1:20,0:22:9.56:63,10,0	1/1:8,12:20:12.03:132,12,0	0/0:15,0:11:9.67:0,10,62	0/0:16,0:14:2.05:0,2,14	0/0:14,0:12:13.65:0,14,92
chr10	69465465	.	GTA	G	1268.79	PASS	AB=0.998;AC=30;AF=0.577;AN=52;BaseQRankSum=6.614;DP=572;FS=7.521;HRun=0;HaplotypeScore=124.8000;InbreedingCoeff=-0.1076;MQ=40.55;MQ0=65;MQRankSum=0.322;QD=2.61;ReadPosRankSum=-0.013;VQSLOD=2.0697;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:7,14:15:3.01:46,3,0	0/1:16,0:16:73.58:74,0,220	./.	./.	1/1:13,2:15:8.93:127,9,0	0/1:28,0:26:58.14:58,0,140	0/0:20,0:14:20.89:0,21,229	0/1:41,0:30:91.72:92,0,130	0/1:19,0:16:55.65:56,0,168	0/0:24,0:24:39.87:0,40,518	0/1:18,0:15:11.35:11,0,130	0/0:22,5:21:32.03:0,32,367	0/1:20,0:17:45.91:49,0,46	0/1:25,0:22:99:117,0,163	0/1:28,1:29:20.45:20,0,65	0/1:30,0:27:46.39:46,0,150	1/1:18,0:13:12.48:108,12,0	1/1:16,0:10:0.80:129,1,0	0/1:13,0:9:31.15:76,0,31	0/0:14,0:7:2.69:0,3,13	0/1:22,0:10:0.03:0,0,0	0/1:24,0:20:18.82:19,0,255	0/1:26,0:24:0.21:0,0,0	1/1:25,0:23:14.05:95,14,0	0/1:32,0:28:16.86:17,0,36	1/1:23,0:18:11.39:145,11,0	1/1:10,0:7:7.14:68,7,0	1/1:16,0:12:11.55:72,12,0
chr10	69465475	.	GTGTA	G	1041.28	PASS	AB=0.952;AC=20;AF=0.385;AN=52;BaseQRankSum=4.121;DP=578;FS=3.092;HRun=0;HaplotypeScore=135.7277;InbreedingCoeff=-0.1066;MQ=41.27;MQ0=67;MQRankSum=-3.359;QD=2.96;ReadPosRankSum=-1.296;VQSLOD=2.5340;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:16:0.47:0,0,1	0/1:16,0:16:72.20:72,0,254	./.	./.	0/1:15,0:15:16.35:16,0,21	0/1:24,0:22:34.70:35,0,244	0/0:21,0:15:8.88:0,9,149	1/1:37,0:26:41.36:246,41,0	0/1:21,0:18:59.28:59,0,61	0/0:27,0:26:33.34:0,33,785	0/1:20,0:16:27.37:27,0,161	0/0:29,0:23:34.51:0,35,402	0/1:21,0:18:32.57:33,0,159	0/1:22,0:19:41.88:42,0,263	0/1:36,0:35:13.33:13,0,357	0/0:31,0:28:6.13:0,6,442	0/1:14,0:10:5.32:59,0,5	1/1:13,0:8:8.85:110,9,0	0/1:11,1:8:44.62:111,0,45	0/1:14,1:8:4.91:14,0,5	0/0:19,3:11:0.82:0,1,2	0/0:28,0:24:19.27:0,19,373	0/1:11,16:25:0.40:0,0,1	1/1:26,0:23:6.46:72,6,0	0/0:35,0:29:21.02:0,21,292	0/1:18,3:18:99:243,0,123	0/1:11,0:8:9.32:42,0,9	0/0:10,0:6:8.93:0,9,64
chr10	69465477	.	GTA	G	1208.63	PASS	AB=0.984;AC=28;AF=0.538;AN=52;BaseQRankSum=5.612;DP=577;FS=6.572;HRun=0;HaplotypeScore=124.0376;InbreedingCoeff=-0.1033;MQ=41.27;MQ0=68;MQRankSum=-1.379;QD=2.95;ReadPosRankSum=0.496;VQSLOD=2.1452;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:16:0.47:0,0,1	0/1:17,0:17:99:115,0,144	./.	./.	1/1:15,0:15:0.25:19,0,0	0/1:23,0:21:29.60:30,0,170	0/0:22,0:16:10.12:0,10,135	1/1:37,0:25:36.99:227,37,0	0/1:20,1:18:55.64:76,0,56	0/0:28,0:27:19.46:0,19,594	0/1:20,0:16:50.44:50,0,85	0/0:28,0:22:5.78:0,6,247	0/1:21,0:18:44.61:45,0,108	0/1:22,0:19:99:100,0,176	0/1:36,1:36:35.52:36,0,249	0/0:32,0:29:0.16:0,0,319	0/1:12,1:9:5.61:56,0,6	1/1:12,0:7:1.64:95,2,0	0/1:12,0:8:17.91:92,0,18	1/1:15,0:8:2.92:19,3,0	1/1:23,0:11:1.85:6,2,0	0/1:27,0:23:60.17:60,0,241	0/1:27,0:25:0.21:0,0,0	1/1:25,0:22:13.65:95,14,0	0/0:35,0:29:20.96:0,21,267	0/1:21,1:18:46.45:175,0,46	1/1:11,0:8:8.28:56,8,0	1/1:10,0:6:2.24:5,2,0
chr10	69465502	.	TGA	T	292.29	PASS	AB=0.974;AC=12;AF=0.222;AN=54;BaseQRankSum=-0.220;DP=549;FS=0.736;HRun=0;HaplotypeScore=106.7110;InbreedingCoeff=-0.1876;MQ=42.93;MQ0=52;MQRankSum=1.475;QD=1.21;ReadPosRankSum=-0.040;VQSLOD=2.0403;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:12:5.99:0,6,48	0/1:15,0:15:35.25:35,0,123	./.	0/1:4,0:2:0.87:1,0,14	0/0:13,0:12:5.94:0,6,43	0/0:23,0:21:10.87:0,11,275	0/1:24,0:21:99:159,0,110	0/0:34,0:24:38.42:0,38,275	0/1:16,4:17:24.50:25,0,61	0/0:17,0:16:3.01:0,3,46	0/1:25,0:20:10.27:10,0,159	0/1:24,1:22:26.25:26,0,293	0/1:21,0:19:25.26:25,0,186	0/1:23,0:20:16.45:16,0,100	0/1:33,2:34:99:116,0,288	0/0:27,1:25:8.46:0,8,475	0/0:17,0:14:16.43:0,16,138	0/0:13,0:10:17.98:0,18,151	0/0:15,0:11:17.71:0,18,129	0/0:13,0:8:11.96:0,12,114	1/1:18,0:13:2.04:6,2,0	0/0:24,0:20:8.35:0,8,293	0/0:28,0:26:8.77:0,9,91	0/0:21,0:20:5.37:0,5,50	0/1:27,0:22:6.49:6,0,141	0/0:17,0:15:15.75:0,16,127	0/0:13,0:10:8.93:0,9,65	0/0:9,0:6:5.99:0,6,49
chr10	69465811	.	AAAAGAAAATGT	A	13619.84	PASS	AB=0.581;AC=18;AF=0.333;AN=54;BaseQRankSum=17.249;DP=687;FS=16.997;HRun=0;HaplotypeScore=238.7255;InbreedingCoeff=0.8318;MQ=80.11;MQ0=0;MQRankSum=-15.584;QD=66.44;ReadPosRankSum=0.813;VQSLOD=3.3328;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,27:34:63.21:2198,63,0	0/0:15,0:15:45.15:0,45,2277	0/0:30,0:30:84.26:0,84,4006	0/0:21,0:21:57.67:0,58,2893	1/1:0,15:15:36.08:1137,36,0	0/0:28,0:28:84.29:0,84,4670	0/0:25,0:25:75.24:0,75,3815	1/1:6,19:25:57.17:1870,57,0	0/0:32,0:32:96.33:0,96,5210	0/0:41,0:41:99:0,114,6217	0/0:24,0:24:66.12:0,66,3409	0/0:24,0:24:69.24:0,69,3840	0/0:40,0:40:99:0,117,6311	0/0:35,0:35:99:0,105,5598	0/0:37,0:37:99:0,111,6123	0/0:32,0:32:96.33:0,96,5085	1/1:4,11:15:30.10:1069,30,0	0/1:4,9:13:99:611,0,151	1/1:7,17:24:51.13:1522,51,0	1/1:1,8:9:18.06:576,18,0	1/1:1,16:17:33.11:965,33,0	0/0:19,0:19:54.18:0,54,2828	0/0:23,0:23:66.23:0,66,3114	0/0:37,0:37:99:0,111,6371	0/0:19,0:19:51.18:0,51,2858	0/1:6,18:24:99:1746,0,108	1/1:4,25:29:54.18:1926,54,0	./.
chr10	69466787	.	CCA	C	838.52	PASS	AB=0.965;AC=12;AF=0.222;AN=54;BaseQRankSum=2.672;DP=736;FS=6.014;HRun=0;HaplotypeScore=141.5161;InbreedingCoeff=0.2912;MQ=51.28;MQ0=26;MQRankSum=-0.340;QD=3.92;ReadPosRankSum=0.291;VQSLOD=2.1672;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:19,0:36:18:25,0,18	0/1:7,1:8:18.11:18,0,197	0/0:50,0:6:4.83:0,5,52	0/0:45,0:22:14.13:0,14,189	0/1:14,0:13:0:0,0,0	0/0:28,0:28:38.62:0,39,563	0/1:26,1:28:7.66:8,0,661	0/0:24,0:22:21.75:0,22,249	0/0:34,0:34:9.85:0,10,921	0/0:49,0:45:89.41:0,89,1232	0/0:14,2:16:3.01:0,3,48	0/0:30,0:30:54.07:0,54,733	0/0:19,0:18:36.10:0,36,535	0/0:34,2:37:17.83:0,18,1151	0/0:18,0:17:31.66:0,32,480	0/1:14,1:15:42.38:42,0,173	0/0:15,0:13:5.50:0,5,88	0/0:7,0:6:8.60:0,9,63	0/0:24,0:19:5.44:0,5,72	0/1:17,0:18:2.19:2,0,29	0/0:38,0:33:3.24:0,3,23	0/0:34,0:32:34.36:0,34,520	1/1:15,9:24:15.04:171,15,0	1/1:32,20:47:24.44:685,24,0	0/0:28,1:28:2.15:0,2,521	0/0:18,0:17:5.30:0,5,25	1/1:14,0:12:7.58:33,8,0	./.
chr10	69466806	.	CACAGGG	C	1279.79	PASS	AB=0.970;AC=13;AF=0.241;AN=54;BaseQRankSum=5.497;DP=759;FS=4.777;HRun=0;HaplotypeScore=170.1145;InbreedingCoeff=0.0465;MQ=43.61;MQ0=36;MQRankSum=-5.874;QD=4.12;ReadPosRankSum=-1.232;VQSLOD=2.3495;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:28:95.86:96,0,150	0/0:12,0:12:24.56:0,25,509	0/1:72,0:8:9.81:10,0,256	0/1:59,0:12:33.63:34,0,174	0/0:13,0:12:0.89:0,1,2	0/0:25,0:25:25.89:0,26,1326	0/0:30,0:30:77.34:0,77,2059	1/1:19,0:14:5.46:158,5,0	0/0:28,0:27:72.25:0,72,1886	0/0:53,0:48:34.34:0,34,2389	0/0:19,0:18:5.33:0,5,158	0/0:32,0:32:69.02:0,69,1678	0/0:25,0:24:59.12:0,59,1451	0/0:34,0:34:74.32:0,74,2411	0/0:21,0:20:54.10:0,54,1534	0/0:13,0:13:26.57:0,27,643	0/1:14,0:12:38.27:38,0,58	0/1:7,0:6:26.32:139,0,26	0/1:19,1:12:52.55:321,0,53	1/1:16,1:16:12.02:210,12,0	0/1:43,1:33:29.02:162,0,29	0/0:34,0:32:41.39:0,41,1010	0/0:23,0:21:13.20:0,13,193	0/0:52,0:45:78.01:0,78,1131	0/0:31,0:31:39.46:0,39,1103	0/1:17,0:10:20.59:89,0,21	0/1:9,3:9:17.91:178,0,18	./.
chr10	69466808	.	CAGGG	C	1108.96	PASS	AB=0.945;AC=12;AF=0.222;AN=54;BaseQRankSum=5.440;DP=744;FS=3.686;HRun=0;HaplotypeScore=154.1905;InbreedingCoeff=0.0458;MQ=43.46;MQ0=36;MQRankSum=-5.981;QD=4.76;ReadPosRankSum=-1.172;VQSLOD=2.5348;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:23:70.04:70,0,158	0/0:12,0:12:24.49:0,24,452	0/0:69,3:8:2.66:0,3,253	0/1:56,2:11:34.30:34,0,174	0/0:13,0:12:0.89:0,1,2	0/0:22,2:24:26.56:0,27,1131	0/0:27,1:28:77.35:0,77,1796	1/1:14,5:14:0.83:156,1,0	0/0:27,0:26:72.24:0,72,1610	0/0:47,0:44:36.77:0,37,2083	0/0:18,1:18:5.37:0,5,154	0/0:32,0:32:67.73:0,68,1475	0/0:24,0:23:58.64:0,59,1258	0/0:34,0:34:39.41:0,39,2061	0/0:21,0:20:47.96:0,48,1285	0/0:13,0:13:28.39:0,28,568	0/1:15,1:13:52.19:74,0,52	0/1:6,1:6:13.59:142,0,14	0/1:18,0:11:61.45:242,0,61	1/1:14,3:16:12.02:190,12,0	0/1:42,1:32:31.35:160,0,31	0/0:35,0:33:41.39:0,41,896	0/0:22,0:20:12.62:0,13,156	0/0:51,2:46:81.32:0,81,1150	0/0:29,1:30:40.14:0,40,929	0/1:16,1:10:31.64:89,0,32	0/1:10,1:8:17.91:100,0,18	./.
chr10	69466809	.	AGG	A	590.55	PASS	AB=0.983;AC=17;AF=0.315;AN=54;BaseQRankSum=6.873;DP=726;FS=6.175;HRun=3;HaplotypeScore=139.1980;InbreedingCoeff=0.1684;MQ=43.38;MQ0=36;MQRankSum=-3.825;QD=1.75;ReadPosRankSum=0.116;VQSLOD=-0.5646;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:21,1:21:20.20:20,0,116	0/0:11,0:11:8.44:0,8,219	0/1:70,0:8:5.96:6,0,159	0/1:58,1:10:19.45:19,0,105	0/0:14,0:13:0.47:0,0,1	0/1:24,0:24:3.63:4,0,544	0/0:27,1:28:72.04:0,72,1184	1/1:11,1:8:9.90:93,10,0	0/0:26,0:25:53.12:0,53,951	0/0:49,0:44:15.96:0,16,1230	0/0:19,0:18:5.33:0,5,99	0/0:31,0:31:41.22:0,41,834	0/0:24,0:23:53.82:0,54,779	0/0:34,0:34:50.35:0,50,1269	0/0:21,0:20:24.49:0,24,802	0/0:13,0:13:28.28:0,28,361	0/1:16,1:13:30.96:52,0,31	1/1:7,0:6:6.63:99,7,0	0/1:17,0:11:99:118,0,99	1/1:18,0:16:9.02:101,9,0	0/1:40,0:31:12.15:97,0,12	0/0:33,1:32:37.24:0,37,532	0/1:21,0:19:48.82:52,0,49	0/0:50,1:44:54.53:0,55,465	0/0:29,0:30:37.31:0,37,553	1/1:16,0:10:5.20:57,5,0	0/1:9,0:7:20.45:36,0,20	./.
chr10	69466812	.	GAC	G	201.78	PASS	AB=0.921;AC=14;AF=0.259;AN=54;BaseQRankSum=5.224;DP=747;FS=0.000;HRun=0;HaplotypeScore=143.8522;InbreedingCoeff=-0.1648;MQ=42.70;MQ0=37;MQRankSum=-4.358;QD=0.58;ReadPosRankSum=-1.103;VQSLOD=2.4654;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:21,0:22:16.23:16,0,130	0/1:10,1:11:21.57:22,0,162	0/1:74,0:8:10.97:11,0,95	0/0:60,0:6:5.91:0,6,83	0/1:11,0:12:0:0,0,0	0/1:23,1:22:24.22:24,0,568	0/0:26,2:28:26.49:0,26,845	0/0:14,0:9:3.48:0,3,35	0/0:25,1:25:4.81:0,5,492	0/1:48,6:48:73.56:74,0,809	0/0:20,1:20:6:0,6,74	0/1:32,1:33:16.09:16,0,692	0/0:27,0:25:58.42:0,58,861	0/0:33,0:33:61.42:0,61,894	0/0:19,1:19:14.52:0,15,702	0/0:13,1:13:21.07:0,21,331	0/0:16,1:13:5.44:0,5,106	0/1:6,1:6:1.37:31,0,1	0/0:17,0:10:0.51:0,1,50	1/1:16,1:17:2.37:8,2,0	0/1:37,2:29:28.86:29,0,35	0/0:32,2:31:20.92:0,21,338	0/1:22,2:21:23.39:23,0,109	0/0:56,0:48:63.19:0,63,962	0/0:26,3:29:9.51:0,10,387	0/1:12,4:10:23.49:64,0,23	0/1:8,0:8:23.39:23,0,30	./.
chr10	69466832	.	GAC	G	472.11	PASS	AB=0.926;AC=14;AF=0.269;AN=52;BaseQRankSum=6.748;DP=783;FS=9.015;HRun=0;HaplotypeScore=144.9179;InbreedingCoeff=0.2067;MQ=37.73;MQ0=58;MQRankSum=-6.201;QD=2.20;ReadPosRankSum=-4.181;VQSLOD=0.0763;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:22,1:21:35.49:35,0,48	0/0:12,0:11:5.86:0,6,135	0/0:69,0:7:3.41:0,3,18	0/0:81,0:2:3.01:0,3,44	./.	0/0:29,0:26:0.96:0,1,545	0/0:26,0:26:11.15:0,11,634	0/1:13,2:9:18.21:104,0,18	0/0:22,0:20:32.91:0,33,411	0/1:53,2:45:99:189,0,565	0/0:21,0:19:6.02:0,6,97	0/0:27,1:26:42.08:0,42,568	0/0:30,0:27:53.20:0,53,715	0/0:26,0:24:42.12:0,42,627	0/0:19,0:18:33.10:0,33,504	0/0:17,0:14:21.05:0,21,295	1/1:13,1:8:5.65:48,6,0	1/1:2,2:3:3.28:70,3,0	0/1:19,1:11:9.65:10,0,301	./.	1/1:42,5:33:8.64:59,9,0	0/0:27,2:26:11.87:0,12,172	0/0:28,0:23:5.15:0,5,291	0/0:50,4:47:63.21:0,63,966	0/0:43,0:34:24.45:0,24,416	0/1:16,4:9:52.50:53,0,86	1/1:8,2:8:6.16:48,6,0	0/1:6,0:4:5.10:5,0,64
chr10	69466846	.	CACCACA	C	699.40	PASS	AB=0.950;AC=10;AF=0.179;AN=56;BaseQRankSum=5.738;DP=846;FS=17.376;HRun=0;HaplotypeScore=163.5482;InbreedingCoeff=-0.0403;MQ=33.15;MQ0=80;MQRankSum=-4.888;QD=3.04;ReadPosRankSum=-2.420;VQSLOD=1.1310;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:20:32.70:33,0,182	0/1:18,0:17:35.10:35,0,256	0/0:86,0:2:6.02:0,6,92	0/0:95,0:5:12.04:0,12,277	0/0:14,0:14:3.01:0,3,57	0/0:29,0:25:6.52:0,7,1315	0/0:30,0:29:29.21:0,29,1646	0/1:13,0:11:99:128,0,104	0/0:20,0:19:35.97:0,36,666	0/1:49,4:42:99:508,0,1172	0/0:20,0:15:6.91:0,7,163	0/0:29,0:27:57.17:0,57,1544	0/0:29,0:27:65.64:0,66,1493	0/0:25,0:23:45.08:0,45,1114	0/0:15,0:14:33.11:0,33,1067	0/0:21,0:17:23.82:0,24,484	0/1:12,1:8:14.22:14,0,113	0/0:7,0:4:11.10:0,11,64	0/1:20,0:12:1.75:2,0,511	0/0:23,1:19:2.88:0,3,62	1/1:54,1:37:8.59:59,9,0	0/0:31,1:29:16.76:0,17,420	0/1:23,2:21:16.01:16,0,713	0/0:50,0:41:65.43:0,65,1887	0/0:44,2:37:30.48:0,30,994	0/0:27,1:16:26.69:0,27,528	0/0:9,0:8:11.34:0,11,183	0/1:5,0:3:43.56:44,0,189
chr10	69466867	.	G	GAC	179.51	PASS	AB=0.977;AC=15;AF=0.278;AN=54;BaseQRankSum=5.767;DP=792;FS=1.783;HRun=0;HaplotypeScore=144.9127;InbreedingCoeff=-0.0267;MQ=31.83;MQ0=74;MQRankSum=-5.070;QD=0.55;ReadPosRankSum=-0.925;VQSLOD=2.6228;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:15:1.33:14,1,0	0/1:16,1:17:26.26:26,0,118	./.	0/0:82,0:6:14.72:0,15,156	0/1:16,1:14:0:0,0,0	0/0:31,0:24:29.99:0,30,341	0/0:35,1:34:66.07:0,66,820	0/1:20,0:14:47.20:76,0,47	0/0:17,1:16:20.30:0,20,173	0/1:62,0:46:45.04:45,0,550	0/1:17,0:13:0:0,0,0	0/0:30,0:25:42.10:0,42,510	0/0:24,1:24:30.64:0,31,305	0/0:27,0:21:27.03:0,27,318	0/0:14,0:12:18.53:0,19,227	0/0:21,0:18:17.92:0,18,172	0/1:10,0:6:0:0,0,0	0/1:5,1:4:11.34:11,0,14	0/1:17,0:9:3.43:3,0,29	0/0:20,0:13:6.02:0,6,75	0/1:54,1:38:9.26:9,0,10	0/1:36,1:32:5.71:6,0,118	0/1:23,0:17:4.84:5,0,123	0/0:32,1:25:30:0,30,293	0/0:49,0:35:25.43:0,25,288	0/1:25,0:19:86.79:105,0,87	0/1:6,0:6:8.89:9,0,27	0/0:7,0:5:7.45:0,7,51
chr10	69466886	.	C	CGG	69.74	PASS	AB=0.959;AC=9;AF=0.161;AN=56;BaseQRankSum=7.220;DP=793;FS=6.939;HRun=0;HaplotypeScore=153.0147;InbreedingCoeff=0.0873;MQ=29.82;MQ0=90;MQRankSum=-5.275;QD=0.48;ReadPosRankSum=-5.505;VQSLOD=-0.4837;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:13,0:12:12.16:12,0,27	0/0:19,0:18:16.61:0,17,202	0/0:85,0:4:6.02:0,6,96	0/0:90,0:10:26.83:0,27,334	1/1:19,0:15:1.14:3,1,0	0/0:25,1:21:28.65:0,29,470	0/0:45,1:41:87.72:0,88,1310	0/0:15,0:10:10.31:0,10,130	0/1:25,1:22:34.71:35,0,273	0/0:49,0:33:72.29:0,72,964	0/0:22,1:19:6.01:0,6,95	0/0:35,1:29:44.32:0,44,695	0/0:19,1:17:9.61:0,10,362	0/0:29,0:22:26.37:0,26,434	0/0:16,0:15:23.84:0,24,321	0/0:23,0:19:16.26:0,16,218	0/0:16,0:12:6.53:0,7,82	0/1:8,1:7:53.73:54,0,79	0/0:16,0:5:6.01:0,6,67	0/1:25,2:19:31.81:32,0,55	1/1:37,5:27:3.11:34,3,0	0/0:34,1:28:14.19:0,14,210	0/0:17,0:14:13.03:0,13,117	0/0:26,1:19:20.09:0,20,165	0/0:38,1:28:14.91:0,15,277	0/0:18,0:15:8.18:0,8,187	0/1:7,0:6:26.60:27,0,42	0/0:3,1:3:6:0,6,53
chr10	69466898	.	C	CA	532.10	PASS	AB=0.953;AC=15;AF=0.278;AN=54;BaseQRankSum=6.707;DP=716;FS=1.585;HRun=1;HaplotypeScore=138.5315;InbreedingCoeff=0.0574;MQ=32.94;MQ0=77;MQRankSum=-6.018;QD=2.45;ReadPosRankSum=0.530;VQSLOD=-0.4902;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:6:0.12:0,0,1	0/1:13,0:12:27.45:27,0,165	0/0:82,0:6:5.94:0,6,72	0/0:95,0:13:21.06:0,21,342	./.	0/0:22,2:21:30.32:0,30,359	0/0:50,2:46:44.13:0,44,1112	0/1:8,1:8:24.42:79,0,24	0/1:24,1:22:45.78:46,0,217	0/1:28,2:22:81.51:82,0,507	0/0:22,1:19:6.49:0,6,76	0/0:37,1:30:47.27:0,47,635	0/1:16,1:13:7.97:8,0,234	0/0:35,1:30:36.76:0,37,438	0/0:21,0:18:20.08:0,20,236	0/1:23,0:21:41.07:41,0,143	1/1:9,4:10:15.01:173,15,0	0/1:7,1:6:22.50:66,0,22	0/0:10,0:2:2.99:0,3,24	1/1:24,2:18:5.89:73,6,0	1/1:30,1:18:2.43:9,2,0	0/0:28,2:24:16.73:0,17,183	0/0:13,0:12:2.99:0,3,8	0/0:26,1:18:14.81:0,15,80	0/0:19,1:15:9.01:0,9,122	0/1:15,0:13:19.38:40,0,19	0/0:4,0:3:2.87:0,3,34	0/1:5,0:4:3.97:41,0,4
chr10	69466905	.	CACGG	C	248.14	PASS	AB=0.953;AC=13;AF=0.241;AN=54;BaseQRankSum=6.459;DP=707;FS=4.668;HRun=0;HaplotypeScore=158.7116;InbreedingCoeff=0.0422;MQ=33.18;MQ0=66;MQRankSum=-5.039;QD=0.76;ReadPosRankSum=0.001;VQSLOD=2.3464;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:5:1.36:0,1,3	0/1:12,0:11:4.93:5,0,214	0/1:82,0:7:8.12:8,0,66	0/1:102,0:15:16.54:17,0,325	0/0:20,0:15:0:0,0,0	0/0:23,0:20:26.46:0,26,692	0/0:55,0:49:95.96:0,96,2128	0/0:6,0:6:0.78:0,1,27	0/1:27,0:23:6.26:6,0,431	0/1:28,0:24:8.79:9,0,776	0/0:22,0:18:12.25:0,12,221	0/0:45,0:37:29.31:0,29,1022	0/0:18,0:12:22.75:0,23,471	0/0:35,0:29:30.58:0,31,665	0/0:23,0:20:27.86:0,28,517	0/0:25,0:24:22.48:0,22,436	0/1:13,0:9:1.75:75,0,2	0/1:9,1:7:73.03:105,0,73	./.	0/0:24,1:20:8.62:0,9,122	0/0:22,2:15:0.41:0,0,1	0/1:31,0:25:4.86:5,0,261	0/0:10,0:10:2.88:0,3,19	0/0:24,0:17:12.71:0,13,163	0/0:18,0:15:0.67:0,1,188	1/1:12,0:10:6:58,6,0	1/1:4,0:3:1.72:4,2,0	0/1:2,2:4:28.75:86,0,29
chr10	69466906	.	ACG	A	55.76	PASS	AB=0.980;AC=16;AF=0.308;AN=52;BaseQRankSum=5.822;DP=697;FS=0.000;HRun=0;HaplotypeScore=152.5661;InbreedingCoeff=0.2894;MQ=33.23;MQ0=60;MQRankSum=-4.873;QD=0.18;ReadPosRankSum=-0.062;VQSLOD=2.3596;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:4:1.36:0,1,3	0/0:12,0:11:14.51:0,15,223	0/1:79,0:7:11.39:11,0,23	0/1:100,0:15:17.76:18,0,317	./.	0/0:22,0:19:30.82:0,31,538	0/0:55,0:49:97.79:0,98,1630	0/0:5,0:5:8.97:0,9,90	0/1:27,0:23:0.28:0,0,274	0/0:28,0:24:23.86:0,24,661	0/0:21,0:18:11.79:0,12,136	0/0:43,0:35:26.67:0,27,770	0/0:19,0:13:25.34:0,25,332	0/0:34,2:30:34.54:0,35,552	0/0:22,0:20:29.26:0,29,426	0/0:25,0:24:26.01:0,26,294	1/1:14,0:10:3.55:37,4,0	0/1:10,0:7:34.84:35,0,88	./.	0/0:22,0:19:8.79:0,9,62	1/1:23,0:15:0.94:2,1,0	0/1:28,1:25:12.44:12,0,173	1/1:9,0:9:2.87:15,3,0	0/0:23,0:17:12.34:0,12,127	0/0:18,0:15:10.34:0,10,142	1/1:10,0:10:5.90:38,6,0	1/1:4,0:3:2.98:21,3,0	0/1:4,0:4:6.11:6,0,10
chr10	69466923	.	GAC	G	326.27	PASS	AB=0.963;AC=15;AF=0.288;AN=52;BaseQRankSum=7.143;DP=754;FS=3.114;HRun=0;HaplotypeScore=174.0220;InbreedingCoeff=-0.2373;MQ=32.43;MQ0=64;MQRankSum=-5.576;QD=0.94;ReadPosRankSum=-4.121;VQSLOD=1.7602;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:6:1.25:0,1,3	0/0:11,0:9:0.88:0,1,132	0/0:82,0:9:17.78:0,18,180	0/0:105,0:13:18.52:0,19,218	./.	0/1:29,0:24:69.42:69,0,373	0/0:60,2:52:21:0,21,860	./.	0/1:34,0:25:18.20:18,0,280	0/1:26,0:23:95.36:95,0,299	0/0:13,0:11:8.72:0,9,143	0/1:44,0:36:12.94:13,0,420	0/1:22,0:19:28.19:28,0,289	0/1:36,1:32:43.15:43,0,392	0/0:26,0:22:9.76:0,10,176	0/1:33,1:32:74.37:74,0,382	0/1:13,2:12:4.34:4,0,45	0/0:11,0:7:8.94:0,9,84	1/1:6,0:2:2.94:18,3,0	0/0:27,0:23:5.99:0,6,93	0/0:18,1:11:2.90:0,3,16	0/1:32,0:29:6.46:6,0,260	0/0:8,0:10:2.45:0,2,10	0/1:25,0:19:0:0,0,0	0/1:17,0:16:1.73:2,0,171	0/1:19,0:15:22:22,0,100	0/1:3,1:3:32.11:64,0,32	0/0:10,0:10:6.94:0,7,148
chr10	69466951	.	ACAC	A	675.35	PASS	AB=0.996;AC=23;AF=0.426;AN=54;BaseQRankSum=8.731;DP=843;FS=19.551;HRun=0;HaplotypeScore=191.2286;InbreedingCoeff=-0.1107;MQ=30.64;MQ0=89;MQRankSum=-6.916;QD=1.36;ReadPosRankSum=0.514;VQSLOD=1.6056;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:9,0:7:3.07:11,3,0	0/1:14,0:11:29.23:77,0,29	0/0:80,0:4:9.03:0,9,142	0/0:92,0:8:17.27:0,17,228	0/0:20,2:18:3:0,3,25	0/1:32,0:26:41.69:42,0,645	0/0:57,0:47:31.08:0,31,1124	./.	0/1:43,0:34:11.55:12,0,795	0/1:45,0:32:99:106,0,790	0/0:16,0:15:7.93:0,8,115	0/1:52,0:40:28.49:28,0,558	0/1:31,0:28:4.29:4,0,511	0/1:39,0:34:6.93:7,0,654	0/0:37,0:31:18.67:0,19,304	0/1:41,0:35:84.05:84,0,383	0/1:15,0:13:1.70:2,0,64	1/1:8,0:7:3.05:39,3,0	0/0:18,0:11:16.38:0,16,189	1/1:24,2:23:4.64:76,5,0	0/0:12,0:8:1.25:0,1,3	0/1:31,0:26:17.30:17,0,453	0/1:21,0:18:46.96:47,0,56	1/1:37,0:27:1.80:50,2,0	0/1:24,0:17:10.26:10,0,302	0/1:17,1:11:82.86:83,0,123	0/0:5,0:5:5.87:0,6,85	1/1:7,2:7:11.70:135,12,0
chr10	69466960	.	A	ACACT	74.77	PASS	AB=1.000;AC=9;AF=0.167;AN=54;BaseQRankSum=5.439;DP=825;FS=4.055;HRun=0;HaplotypeScore=227.8359;InbreedingCoeff=0.1173;MQ=32.06;MQ0=74;MQRankSum=-6.184;QD=0.93;ReadPosRankSum=0.107;VQSLOD=2.4823;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:8:4.51:0,5,23	0/1:16,0:13:0.40:0,0,73	0/0:72,0:5:8.92:0,9,95	0/0:82,0:9:15.01:0,15,191	0/0:20,1:18:2.80:0,3,14	0/0:28,0:24:37.88:0,38,603	0/0:57,0:48:52.05:0,52,927	./.	0/0:41,0:32:46.27:0,46,723	0/0:49,0:35:74.82:0,75,925	0/0:19,0:18:12.01:0,12,169	0/0:49,0:39:36.50:0,37,545	0/0:34,0:31:21.92:0,22,619	0/0:36,0:32:38.42:0,38,637	0/0:36,0:30:18.03:0,18,277	0/0:44,0:39:23.04:0,23,369	0/1:11,0:9:16.83:17,0,28	0/1:7,0:6:10.97:20,0,11	0/1:14,0:10:34.90:35,0,71	0/0:18,2:18:6.92:0,7,49	1/1:11,1:8:0.47:1,0,0	0/0:31,0:27:27.08:0,27,405	0/0:25,0:22:0.06:0,0,53	0/0:44,0:36:1.10:0,1,15	0/0:24,0:18:6.55:0,7,252	0/1:14,0:11:3.04:3,0,66	1/1:5,1:5:4.80:110,5,0	0/0:9,0:7:14.93:0,15,135
chr10	69466969	.	CGGA	C	115.55	PASS	AB=0.858;AC=10;AF=0.192;AN=52;BaseQRankSum=7.308;DP=723;FS=60.993;HRun=0;HaplotypeScore=207.7277;InbreedingCoeff=-0.0577;MQ=33.71;MQ0=37;MQRankSum=-6.665;QD=1.19;ReadPosRankSum=-0.661;VQSLOD=0.4597;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:7,0:7:0.42:0,0,29	0/1:9,2:10:36.52:37,0,117	0/0:61,0:3:6.02:0,6,89	0/0:62,0:7:15.04:0,15,238	./.	0/0:26,0:24:43.87:0,44,1045	0/0:53,1:52:30.35:0,30,1411	./.	0/0:27,5:30:55.06:0,55,977	0/0:44,2:37:4.32:0,4,1776	0/1:17,2:19:1.85:2,0,263	0/0:35,6:36:0.68:0,1,719	0/0:32,1:31:66.73:0,67,1281	0/0:30,2:32:41.73:0,42,1104	0/0:26,1:27:20.41:0,20,429	0/0:34,1:32:51.87:0,52,793	0/1:4,1:7:25.47:44,0,25	1/1:1,1:3:5.81:58,6,0	0/0:6,0:7:9.03:0,9,171	0/1:7,0:9:8.01:8,0,13	0/0:8,0:9:4.25:0,4,31	0/0:31,1:30:43.39:0,43,794	0/0:29,0:29:14.73:0,15,193	0/0:45,1:37:1.83:0,2,119	0/1:20,1:19:1.27:1,0,260	0/1:4,0:7:49.15:49,0,144	0/0:2,0:3:1.22:0,1,60	0/1:4,0:4:36.69:37,0,56
chr10	69466979	.	CAT	C	395.57	PASS	AB=0.990;AC=27;AF=0.519;AN=52;BaseQRankSum=10.509;DP=717;FS=46.656;HRun=0;HaplotypeScore=203.7953;InbreedingCoeff=-0.2158;MQ=32.67;MQ0=31;MQRankSum=-7.069;QD=0.80;ReadPosRankSum=-4.530;VQSLOD=-0.0779;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,0:7:2.67:28,3,0	0/1:12,0:11:38.66:39,0,41	0/0:54,0:1:3.01:0,3,51	0/1:56,1:8:5.63:6,0,82	./.	0/1:30,0:26:26.64:27,0,684	0/1:60,0:52:10.95:11,0,670	./.	0/0:34,0:28:3.33:0,3,390	0/1:42,0:34:17.19:17,0,782	0/1:18,0:17:7.32:7,0,104	0/1:45,1:37:26.17:26,0,370	0/1:36,0:34:15.75:16,0,648	0/0:37,1:34:5.70:0,6,669	0/0:29,0:28:8.62:0,9,304	0/1:36,0:32:66.74:67,0,231	1/1:7,0:6:7.35:32,7,0	0/1:3,0:3:8.94:12,0,9	0/0:9,0:5:3.01:0,3,33	1/1:7,1:8:0.08:9,0,0	1/1:11,0:9:2.94:19,3,0	0/0:38,0:36:24.49:0,24,549	0/1:32,0:32:13.15:19,0,13	0/1:48,1:38:26.39:70,0,26	0/1:23,0:20:31.03:31,0,130	1/1:7,1:7:0.99:41,1,0	1/1:1,1:2:5.64:27,6,0	1/1:2,1:3:5.10:40,5,0
chr10	69466983	.	CA	C	357.73	PASS	AB=0.937;AC=14;AF=0.259;AN=54;BaseQRankSum=8.307;DP=717;FS=111.115;HRun=1;HaplotypeScore=204.9878;InbreedingCoeff=0.0518;MQ=32.98;MQ0=28;MQRankSum=-6.221;QD=1.79;ReadPosRankSum=-2.557;VQSLOD=-0.5326;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:7,1:7:10.01:20,0,10	0/1:12,1:12:29.32:29,0,115	0/0:48,0:3:9.03:0,9,129	0/0:55,0:7:7.77:0,8,209	0/0:7,0:7:0:0,0,0	0/1:28,2:26:5.33:5,0,712	0/0:57,2:51:55.03:0,55,869	./.	0/0:31,2:27:33.68:0,34,474	0/0:41,1:34:85.70:0,86,1142	0/0:17,2:18:10.91:0,11,146	0/1:44,3:38:66.89:67,0,492	0/1:37,2:36:30.77:31,0,823	0/0:33,3:32:22.53:0,23,631	0/0:29,2:28:16.53:0,17,329	0/1:30,1:27:12.77:13,0,318	0/1:6,0:5:3.84:52,0,4	1/1:2,0:3:5.84:34,6,0	0/0:8,2:5:2.96:0,3,19	1/1:8,2:10:5.23:38,5,0	0/0:14,0:11:3.95:0,4,31	0/0:41,1:40:32.83:0,33,520	0/0:34,2:34:9.87:0,10,110	0/0:49,4:41:8.28:0,8,79	0/0:23,1:21:25.38:0,25,288	0/1:6,0:6:37.11:118,0,37	0/1:3,0:3:29.45:35,0,29	0/1:2,1:3:0.15:64,0,0
chr10	69466996	.	ACT	A	763.34	PASS	AB=0.938;AC=26;AF=0.481;AN=54;BaseQRankSum=10.604;DP=657;FS=51.728;HRun=0;HaplotypeScore=187.6030;InbreedingCoeff=-0.0564;MQ=35.19;MQ0=17;MQRankSum=-7.592;QD=1.81;ReadPosRankSum=-2.729;VQSLOD=0.1728;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:7,0:6:1.06:11,0,1	0/1:7,0:7:24.09:24,0,71	0/0:41,0:4:1.29:0,1,58	0/0:46,0:6:2.33:0,2,58	0/1:8,0:8:0:0,0,0	0/0:28,0:23:10.66:0,11,538	0/1:50,5:50:74.54:75,0,620	./.	0/1:23,1:20:9.81:10,0,170	0/1:32,5:31:99:151,0,800	0/1:15,2:16:26.53:27,0,147	0/1:43,2:36:1.89:2,0,411	0/1:35,1:33:39.23:39,0,626	0/0:32,1:29:13.44:0,13,405	0/0:33,0:29:19.92:0,20,293	0/1:25,5:26:93.82:177,0,94	1/1:5,0:4:6.78:29,7,0	1/1:3,0:3:2.23:18,2,0	1/1:10,0:5:1.82:5,2,0	0/0:8,0:8:2.50:0,2,9	0/1:13,0:10:0.26:0,0,0	0/0:37,6:42:14.37:0,14,367	0/1:28,6:33:29.30:59,0,29	0/1:49,5:44:9.13:120,0,9	0/1:22,2:22:27.01:27,0,162	1/1:6,0:6:15.64:77,16,0	1/1:3,0:3:7.04:36,7,0	1/1:3,0:3:4.79:27,5,0
chr10	69466998	.	TCA	T	353.79	PASS	AB=0.934;AC=16;AF=0.308;AN=52;BaseQRankSum=7.321;DP=644;FS=20.248;HRun=0;HaplotypeScore=182.7111;InbreedingCoeff=-0.1178;MQ=35.50;MQ0=18;MQRankSum=-6.371;QD=1.22;ReadPosRankSum=0.255;VQSLOD=1.2088;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:7,0:6:1:28,0,1	0/1:7,0:7:44.41:44,0,93	0/0:41,0:5:5.03:0,5,65	0/0:44,0:6:9.92:0,10,131	./.	0/0:28,0:23:28.50:0,29,426	0/1:49,0:46:99:139,0,561	./.	0/0:22,0:18:1.23:0,1,134	0/1:37,0:31:68.16:68,0,697	0/1:17,0:16:27.27:27,0,149	0/0:41,0:35:3.94:0,4,370	0/0:35,0:33:40.81:0,41,679	0/0:36,0:30:21.79:0,22,292	0/0:31,0:28:2.34:0,2,203	0/1:26,0:23:49.60:50,0,107	1/1:5,0:4:0.04:0,0,0	0/0:3,0:3:3.31:0,3,16	0/0:10,0:5:2.90:0,3,16	0/1:5,3:8:0:0,0,0	0/0:12,2:10:0:0,0,0	0/1:41,0:40:1.05:1,0,264	0/0:35,0:34:3.16:0,3,143	0/1:53,0:44:19.70:20,0,63	0/1:25,0:23:0.94:1,0,235	0/1:4,2:6:5.42:57,0,5	0/1:2,1:3:8.15:26,0,8	1/1:2,1:3:1.62:16,2,0
chr10	69467010	.	ACG	A	747.79	PASS	AB=0.914;AC=23;AF=0.442;AN=52;BaseQRankSum=9.016;DP=621;FS=75.287;HRun=0;HaplotypeScore=176.2012;InbreedingCoeff=-0.0997;MQ=36.92;MQ0=18;MQRankSum=-7.049;QD=1.90;ReadPosRankSum=0.120;VQSLOD=-0.4710;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:8,0:5:1.13:9,0,1	0/1:7,3:9:81.73:82,0,106	0/0:39,0:5:10.52:0,11,117	0/1:45,1:5:6.03:6,0,119	./.	0/0:23,1:21:27.35:0,27,447	0/1:41,7:43:99:259,0,769	./.	0/1:19,1:17:0.59:1,0,185	0/1:36,4:36:99:231,0,809	0/1:17,2:19:58.60:59,0,208	0/1:33,6:35:13.39:13,0,447	0/0:29,1:29:43.05:0,43,828	0/0:32,3:29:32.95:0,33,431	0/1:23,3:22:13.66:14,0,253	0/1:19,4:22:99:102,0,161	1/1:3,0:3:0.89:2,1,0	1/1:3,0:3:2.74:12,3,0	1/1:11,0:6:1.55:4,2,0	0/1:8,0:8:0:0,0,0	0/1:16,0:10:0.04:0,0,0	0/1:29,10:38:22.21:22,0,379	0/0:38,0:36:17.57:0,18,271	0/0:52,0:44:15.12:0,15,149	0/1:23,2:24:11.87:12,0,391	1/1:5,0:5:10.25:48,10,0	0/1:3,0:3:9.07:9,0,15	0/0:3,0:2:0.86:0,1,2
chr10	69467124	.	CG	C	358.39	PASS	AB=0.917;AC=23;AF=0.676;AN=34;BaseQRankSum=-0.845;DP=155;FS=0.000;HRun=3;HaplotypeScore=40.6089;InbreedingCoeff=0.3048;MQ=51.21;MQ0=17;MQRankSum=-0.728;QD=3.73;ReadPosRankSum=-2.476;VQSLOD=-0.7516;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:2,0:3:0.11:0,0,0	./.	0/0:42,0:7:18.06:0,18,229	0/1:26,0:1:0.33:0,0,0	./.	1/1:0,1:2:3.48:38,3,0	1/1:2,5:6:5.05:43,5,0	./.	./.	1/1:0,1:1:3.01:37,3,0	./.	1/1:3,3:6:8.06:80,8,0	1/1:0,3:3:6.02:73,6,0	./.	1/1:3,1:4:3.01:37,3,0	0/0:1,2:3:0:0,0,0	./.	./.	0/0:1,0:2:2.04:0,2,6	./.	1/1:10,0:16:0.47:1,0,0	1/1:2,2:5:3.01:37,3,0	0/0:0,2:2:0.47:0,0,1	1/1:1,5:5:5.71:61,6,0	./.	0/1:3,0:3:9.11:14,0,9	1/1:1,0:2:2.69:34,3,0	./.
chr10	69467147	.	ACAC	A	666.96	PASS	AB=0.970;AC=19;AF=0.352;AN=54;BaseQRankSum=5.094;DP=566;FS=45.128;HRun=0;HaplotypeScore=118.9798;InbreedingCoeff=-0.2514;MQ=32.43;MQ0=135;MQRankSum=-5.505;QD=1.82;ReadPosRankSum=-2.099;VQSLOD=0.3305;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:10:2.83:0,3,16	0/0:4,0:2:5.95:0,6,86	0/1:65,0:8:5.08:5,0,51	0/0:50,0:2:3.01:0,3,68	./.	0/1:21,0:15:99:200,0,186	0/1:34,3:22:7.08:7,0,222	0/0:27,0:7:12.01:0,12,113	0/1:16,2:11:99:102,0,234	0/1:24,0:16:90.78:91,0,612	0/1:13,0:8:0:0,0,0	0/1:22,1:18:70.42:70,0,231	0/1:18,1:14:43.92:44,0,208	0/1:18,3:18:99:125,0,129	0/1:19,0:13:39.16:39,0,121	0/1:17,0:12:68.84:69,0,83	0/0:6,0:3:0.96:0,1,62	0/1:5,0:4:14.75:17,0,15	0/1:14,0:6:8.27:8,0,97	1/1:14,0:8:2.19:14,2,0	1/1:37,3:21:1.82:5,2,0	0/0:19,1:17:4.57:0,5,133	0/0:10,2:7:2.93:0,3,68	0/0:27,1:21:28.80:0,29,513	1/1:14,2:7:2.03:5,2,0	0/0:15,0:10:3.45:0,3,261	0/0:6,0:3:3.01:0,3,30	0/0:8,0:2:2.50:0,2,9
chr10	69467164	.	ACAC	A	1188.10	PASS	AB=0.978;AC=21;AF=0.375;AN=56;BaseQRankSum=7.097;DP=908;FS=4.316;HRun=0;HaplotypeScore=188.0136;InbreedingCoeff=-0.2306;MQ=27.86;MQ0=165;MQRankSum=-6.600;QD=2.36;ReadPosRankSum=-1.045;VQSLOD=2.1916;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:18,1:15:16.54:18,0,17	0/0:12,0:9:9.41:0,9,185	0/0:77,0:3:6.02:0,6,112	0/0:84,0:3:9.02:0,9,131	0/0:21,1:18:0:0,0,0	0/1:29,0:19:99:144,0,317	0/1:54,0:36:10.13:10,0,696	1/1:27,8:10:18.04:273,18,0	0/0:41,0:28:39.54:0,40,661	0/1:55,0:41:99:102,0,1297	0/0:26,0:20:6.44:0,6,109	0/1:39,0:29:11.40:11,0,561	0/1:37,0:30:86.98:87,0,453	0/0:38,0:32:7.12:0,7,439	0/1:30,0:20:35.73:36,0,418	0/1:28,0:21:54.63:55,0,305	0/1:7,0:3:36.57:37,0,54	0/1:7,0:6:9.90:65,0,10	0/1:23,2:15:91.51:286,0,92	1/1:22,2:18:1.82:14,2,0	1/1:48,1:26:1.21:4,1,0	0/0:37,0:31:8.23:0,8,298	0/0:26,0:18:17.98:0,18,285	0/0:41,0:34:42.41:0,42,721	0/1:29,0:18:19.34:19,0,187	0/1:16,2:13:99:119,0,218	0/1:7,1:5:20.90:63,0,21	0/1:11,0:5:0.07:0,0,68
chr10	69467182	.	GAC	G	259.63	PASS	AB=0.830;AC=11;AF=0.196;AN=56;BaseQRankSum=7.582;DP=1113;FS=40.858;HRun=0;HaplotypeScore=251.9728;InbreedingCoeff=0.0414;MQ=30.22;MQ0=100;MQRankSum=-6.208;QD=1.34;ReadPosRankSum=0.000;VQSLOD=1.0991;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,3:17:1.78:0,2,17	0/0:16,0:13:21.07:0,21,343	0/0:96,0:4:8.89:0,9,100	0/0:99,0:7:11.85:0,12,116	0/1:22,4:27:0.02:0,0,0	0/0:35,0:28:49.81:0,50,625	0/0:72,3:57:59.32:0,59,1193	0/1:21,3:13:9.07:62,0,9	0/0:50,1:36:51.36:0,51,813	0/0:76,2:62:29.02:0,29,1824	0/0:28,0:26:15.01:0,15,198	0/0:56,4:46:63.23:0,63,880	0/0:39,1:36:4.90:0,5,704	0/0:54,0:47:59.90:0,60,885	0/0:43,3:38:20.95:0,21,524	0/0:38,4:36:13.36:0,13,757	0/1:7,3:9:20.18:20,0,42	0/1:6,2:8:45.46:50,0,45	0/1:20,1:17:41.58:42,0,52	0/1:18,5:21:28.48:28,0,44	1/1:34,4:25:1.07:4,1,0	0/0:53,1:47:36.92:0,37,518	0/0:35,0:32:42.14:0,42,665	0/0:45,2:42:36.38:0,36,525	0/0:39,1:34:10.15:0,10,559	0/1:14,5:16:99:120,0,116	0/1:5,4:6:9.58:43,0,10	0/1:9,2:7:0.62:25,0,1
chr10	69467200	.	ACACAC	A	840.37	PASS	AB=0.997;AC=18;AF=0.321;AN=56;BaseQRankSum=9.827;DP=1243;FS=12.267;HRun=0;HaplotypeScore=269.1138;InbreedingCoeff=-0.3314;MQ=29.00;MQ0=228;MQRankSum=-8.657;QD=1.18;ReadPosRankSum=0.207;VQSLOD=1.0986;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:35,2:23:87.76:90,0,88	0/0:18,0:13:18.85:0,19,507	0/0:58,0:2:6.02:0,6,97	0/0:69,0:6:9.03:0,9,207	0/0:33,2:29:2.71:0,3,50	0/1:39,0:28:79.05:79,0,843	0/1:85,0:60:98.32:98,0,1614	1/1:43,0:8:10.36:94,10,0	0/1:56,0:43:25.04:25,0,949	0/1:74,0:50:99:187,0,1561	0/0:29,0:21:12.04:0,12,360	0/1:64,0:47:77.41:77,0,988	0/1:41,0:31:66.56:67,0,826	0/1:55,0:42:36.51:37,0,933	0/0:53,0:41:9.90:0,10,739	0/0:48,0:37:25.70:0,26,889	0/1:18,0:15:47.11:47,0,245	0/1:19,0:15:0.75:1,0,420	0/1:28,0:15:16.36:16,0,269	0/1:36,0:25:36.88:37,0,141	0/0:64,0:39:0.56:0,1,4	0/1:46,0:37:14.87:15,0,439	0/0:40,0:31:33:0,33,880	0/0:60,0:47:45.24:0,45,1010	0/0:53,0:35:20.65:0,21,623	0/1:49,0:30:68.22:68,0,783	0/1:12,0:8:8.24:8,0,19	0/1:13,0:7:49.74:50,0,64
chr10	69467219	.	ACAC	A	747.70	PASS	AB=0.987;AC=16;AF=0.308;AN=52;BaseQRankSum=8.826;DP=1086;FS=10.498;HRun=0;HaplotypeScore=228.2090;InbreedingCoeff=-0.3289;MQ=28.98;MQ0=249;MQRankSum=-7.912;QD=1.13;ReadPosRankSum=-1.248;VQSLOD=1.4110;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:38,0:26:25.06:25,0,128	0/0:21,0:14:18.46:0,18,297	./.	./.	0/0:41,0:29:8.11:0,8,44	0/0:34,1:28:32.14:0,32,801	0/1:75,2:53:99:131,0,1084	0/1:56,0:20:49.89:123,0,50	0/1:43,0:30:5.22:5,0,499	0/1:63,3:34:99:272,0,747	0/0:27,2:20:14.94:0,15,255	0/1:55,0:37:36.64:37,0,614	0/1:37,0:26:15.88:16,0,417	0/1:43,2:33:31.41:31,0,699	0/0:49,0:36:4.40:0,4,487	0/0:37,1:26:14.62:0,15,516	0/1:18,0:14:30.42:30,0,178	0/1:17,0:12:0.66:1,0,354	0/0:32,0:14:6.23:0,6,174	0/1:40,0:27:50.16:50,0,66	1/1:64,0:37:1.94:14,2,0	0/1:33,3:27:25.29:25,0,225	0/0:32,0:24:13.17:0,13,399	0/0:54,0:41:30.68:0,31,562	0/0:51,0:31:8.86:0,9,292	0/1:57,0:30:43.17:43,0,552	0/0:11,0:7:8.01:0,8,50	0/1:14,0:7:47.45:89,0,47
chr10	69467249	.	A	ACT	334.53	PASS	AB=0.980;AC=11;AF=0.196;AN=56;BaseQRankSum=7.972;DP=846;FS=41.062;HRun=0;HaplotypeScore=173.2043;InbreedingCoeff=-0.0139;MQ=36.06;MQ0=125;MQRankSum=-6.075;QD=1.42;ReadPosRankSum=-1.279;VQSLOD=1.2120;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:27,2:24:30.52:31,0,33	0/0:15,0:9:21.05:0,21,284	0/0:28,0:11:23.91:0,24,324	0/0:37,0:18:51.10:0,51,692	0/1:29,2:25:1.26:1,0,9	0/0:27,0:22:59.87:0,60,754	0/0:61,0:46:77.97:0,78,1041	0/1:44,0:27:88.58:89,0,188	0/0:32,0:26:41.55:0,42,532	0/0:50,0:37:66.29:0,66,1051	0/0:20,0:16:11.99:0,12,150	0/0:34,0:27:56.76:0,57,744	0/0:28,0:21:48.12:0,48,600	0/0:35,0:29:45.14:0,45,642	0/0:42,0:34:65.77:0,66,937	0/0:30,0:23:50.85:0,51,689	0/1:12,0:9:11.27:11,0,38	0/1:11,0:9:45.66:46,0,52	0/1:18,0:7:26.93:27,0,76	1/1:24,1:20:6.11:68,6,0	0/0:42,0:30:1.62:0,2,8	0/0:25,0:23:17.83:0,18,256	0/0:25,0:22:20.03:0,20,243	0/0:40,0:32:54.54:0,55,575	0/0:39,0:29:23.29:0,23,283	0/1:37,1:22:99:139,0,200	0/1:11,0:10:10.95:12,0,11	0/1:16,0:10:18.59:54,0,19
chr10	69467497	.	AGAAGGGATAGCCCACTCTCAAT	A	524.04	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.400;DP=620;FS=0.000;HRun=0;HaplotypeScore=340.1690;InbreedingCoeff=0.9646;MQ=81.97;MQ0=0;MQRankSum=1.595;QD=30.83;ReadPosRankSum=-2.543;VQSLOD=1.2726;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,102,9446	0/0:10,0:10:27.09:0,27,2816	0/0:23,0:23:57.19:0,57,3752	0/0:17,0:17:47.37:0,47,2479	0/0:28,0:28:69.24:0,69,6683	0/0:26,0:26:75.26:0,75,6766	0/0:17,0:17:42.14:0,42,3073	1/1:10,7:17:21.06:616,21,0	0/0:20,0:20:57.20:0,57,5181	0/0:31,0:31:87.30:0,87,7952	0/0:15,0:15:33.11:0,33,3098	0/0:22,0:22:63.22:0,63,5878	0/0:31,0:31:90.31:0,90,8739	0/0:26,0:26:72.25:0,72,7080	0/0:32,0:32:93.32:0,93,8936	0/0:24,0:24:66.23:0,66,6153	0/0:30,0:30:81.28:0,81,7285	0/0:19,0:19:54.19:0,54,5169	0/0:19,0:19:48.16:0,48,3543	0/0:24,0:24:69.24:0,69,6841	0/0:28,0:28:81.28:0,81,8420	0/0:18,0:18:45.13:0,45,3671	0/0:20,0:20:54.19:0,54,4125	0/0:10,0:10:30.09:0,30,2533	0/0:21,0:21:57.20:0,57,5284	0/0:29,0:29:84.29:0,84,7414	0/0:21,0:21:57.20:0,57,5326	0/0:7,0:6:12.04:0,12,944
chr10	69468788	.	CTGTGTGTGTGTGTGTGTG	C	1798.89	PASS	AB=0.649;AC=10;AF=0.185;AN=54;BaseQRankSum=4.009;DP=590;FS=18.104;HRun=0;HaplotypeScore=234.0974;InbreedingCoeff=0.5621;MQ=45.50;MQ0=44;MQRankSum=-4.463;QD=12.94;ReadPosRankSum=1.941;VQSLOD=1.1484;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:33:37.95:0,38,1654	0/0:9,0:9:15.04:0,15,592	./.	0/0:1,0:1:3.01:0,3,209	0/0:24,0:23:21.30:0,21,879	0/0:32,0:31:34.70:0,35,2078	0/0:29,0:24:34.58:0,35,1869	0/0:25,0:28:30.10:0,30,1002	0/0:22,0:22:28.83:0,29,1785	0/0:26,0:23:51.17:0,51,2778	0/0:15,0:20:15.52:0,16,1037	0/0:14,0:12:24.55:0,25,1258	0/0:13,0:13:24.08:0,24,1423	0/0:19,0:19:30.57:0,31,2186	0/0:25,0:27:26.35:0,26,1569	0/0:13,0:24:15.03:0,15,765	0/0:13,0:13:8.99:0,9,136	0/0:9,0:7:9.03:0,9,574	1/1:19,0:19:19.13:217,19,0	1/1:10,23:35:2.62:144,3,0	1/1:23,0:17:3.45:22,3,0	0/0:23,0:22:27.08:0,27,1518	0/0:18,0:17:27.09:0,27,2078	0/0:24,0:23:33.11:0,33,2365	0/0:25,0:24:37.92:0,38,2113	0/1:14,18:30:83.67:570,0,84	0/1:11,12:23:7.11:841,0,7	1/1:6,1:3:3.01:145,3,0
chr10	69471134	.	C	CT	8983.46	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=15.980;DP=752;FS=4.333;HRun=3;HaplotypeScore=115.4551;InbreedingCoeff=0.9624;MQ=84.75;MQ0=0;MQRankSum=-11.211;QD=33.27;ReadPosRankSum=-1.367;VQSLOD=3.7452;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,34:37:81.26:1099,81,0	0/0:12,0:12:33.06:0,33,370	0/0:26,0:26:69.21:0,69,824	0/0:25,0:25:69.18:0,69,812	1/1:4,31:35:90.29:1238,90,0	0/0:23,0:23:66.20:0,66,791	0/0:37,0:37:99:0,102,1207	1/1:2,22:24:66.13:875,66,0	0/0:30,0:30:87.25:0,87,1032	0/0:28,0:27:81.24:0,81,962	0/0:22,0:22:63.17:0,63,743	0/0:38,0:38:99:0,108,1272	0/0:25,0:25:75.23:0,75,899	0/0:32,0:32:90.27:0,90,1080	0/0:52,0:52:99:0,150,1788	0/0:24,0:24:72.22:0,72,864	1/1:3,21:24:60.19:822,60,0	1/1:4,12:16:33.07:432,33,0	1/1:3,15:18:51.14:691,51,0	1/1:2,23:25:66.22:922,66,0	1/1:6,30:36:81.21:1069,81,0	0/0:30,0:30:81.25:0,81,970	0/0:17,0:17:48.15:0,48,575	0/0:31,0:31:87.27:0,87,1044	0/0:30,0:30:84.21:0,84,981	1/1:4,21:25:0.18:830,0,0	1/1:3,18:21:54.09:711,54,0	1/1:0,9:9:21.07:294,21,0
chr10	69471190	.	A	AT	7425.34	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=13.380;DP=692;FS=15.627;HRun=4;HaplotypeScore=118.3397;InbreedingCoeff=0.9812;MQ=85.12;MQ0=0;MQRankSum=-13.393;QD=29.01;ReadPosRankSum=-4.504;VQSLOD=2.1733;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:4,27:31:69.14:890,69,0	0/0:15,0:15:45.13:0,45,510	0/0:23,0:23:66.17:0,66,729	0/0:27,0:27:66.13:0,66,723	1/1:3,19:22:57.06:714,57,0	0/0:19,0:19:57.15:0,57,636	0/0:34,0:34:84.21:0,84,933	1/1:4,27:31:90.29:1217,90,0	0/0:19,0:19:57.16:0,57,647	0/0:32,0:32:84.23:0,84,946	0/0:20,0:20:60.17:0,60,680	0/0:37,0:37:99:0,105,1191	0/0:23,0:23:66.19:0,66,748	0/0:28,0:28:84.24:0,84,952	0/0:31,0:31:84.24:0,84,953	0/0:23,0:23:63.18:0,63,715	1/1:11,12:23:36.03:440,36,0	1/1:8,13:21:30.10:410,30,0	1/1:7,18:25:60.20:820,60,0	1/1:3,19:22:57.18:760,57,0	1/1:9,19:28:51.04:632,51,0	0/0:24,0:24:63.18:0,63,715	0/0:13,0:13:24.06:0,24,272	0/0:35,0:35:99:0,102,1147	0/0:33,0:33:93.26:0,93,1053	1/1:4,14:18:8.13:499,8,0	1/1:5,22:27:69.23:927,69,0	1/1:5,3:8:9.03:117,9,0
chr10	69471218	.	A	AC	8408.50	PASS	AC=22;AF=0.393;AN=56;BaseQRankSum=16.987;DP=561;FS=9.984;HRun=0;HaplotypeScore=95.7149;InbreedingCoeff=0.9698;MQ=86.15;MQ0=0;MQRankSum=-12.772;QD=39.48;ReadPosRankSum=-3.324;VQSLOD=2.9069;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,25:27:68.89:938,69,0	0/0:13,0:13:39.13:0,39,545	0/0:22,0:22:48.18:0,48,753	0/0:20,0:20:43.96:0,44,641	1/1:3,11:14:32.93:428,33,0	0/0:15,0:15:45.13:0,45,598	0/0:30,0:30:87.28:0,87,1202	1/1:5,24:29:78.23:1180,78,0	0/0:22,0:22:66.20:0,66,903	0/0:17,0:17:51.16:0,51,685	0/0:10,0:10:30.10:0,30,419	0/0:30,0:30:87.26:0,87,1156	0/0:22,0:22:66.21:0,66,906	0/0:24,0:24:72.23:0,72,990	0/0:28,0:28:84.28:0,84,1174	0/0:21,0:21:63.20:0,63,863	1/1:0,25:25:72.15:1060,72,0	1/1:0,22:22:63.21:1005,63,0	1/1:2,16:18:45.15:717,45,0	1/1:0,12:12:36.05:515,36,0	1/1:1,24:25:60.11:886,60,0	0/0:16,0:16:48.14:0,48,637	0/0:2,0:2:6.02:0,6,84	0/0:30,0:30:90.29:0,90,1243	0/0:26,0:26:78.24:0,78,1072	1/1:3,12:15:30.07:449,30,0	1/1:0,24:24:72.24:1136,72,0	1/1:0,2:2:6.02:96,6,0
chr10	69472598	.	GGTGTGT	G	845.80	PASS	AC=4;AF=0.077;AN=52;BaseQRankSum=3.709;DP=706;FS=10.509;HRun=0;HaplotypeScore=149.1843;InbreedingCoeff=0.7357;MQ=56.07;MQ0=26;MQRankSum=-5.212;QD=10.98;ReadPosRankSum=-1.528;VQSLOD=2.1780;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:33,19:54:44.98:775,45,0	0/0:9,0:9:15.05:0,15,340	0/0:39,0:16:2.89:0,3,97	./.	1/1:12,11:23:9.03:183,9,0	0/0:22,0:23:17.24:0,17,510	0/0:22,0:27:39.11:0,39,874	0/0:25,0:26:44.86:0,45,665	0/0:16,0:18:34:0,34,844	0/0:32,0:32:60.20:0,60,1187	0/0:22,0:22:32.08:0,32,850	0/0:17,0:17:30.10:0,30,805	0/0:17,0:19:32.90:0,33,746	0/0:20,0:23:42.14:0,42,868	0/0:21,0:23:39.13:0,39,1048	0/0:23,0:26:57.19:0,57,1402	0/0:18,0:26:24.45:0,24,459	0/0:8,0:17:9.03:0,9,204	0/0:18,0:22:21.68:0,22,294	./.	0/0:22,0:21:18.19:0,18,282	0/0:20,0:20:30.10:0,30,806	0/0:19,0:26:29.18:0,29,699	0/0:24,0:34:1.28:0,1,74	0/0:19,0:19:24.08:0,24,703	0/0:33,0:34:51.48:0,51,715	0/0:16,0:14:23.67:0,24,410	0/0:9,0:6:9.03:0,9,181
chr10	69472833	.	AGTGTGTGTGTGTGTGTGTGTGTGT	A	907.77	PASS	AB=0.856;AC=4;AF=0.077;AN=52;BaseQRankSum=2.914;DP=619;FS=3.565;HRun=0;HaplotypeScore=322.3665;InbreedingCoeff=0.2074;MQ=62.01;MQ0=17;MQRankSum=-2.134;QD=11.49;ReadPosRankSum=0.334;VQSLOD=1.9521;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:27:30.06:0,30,965	0/0:8,0:8:9.03:0,9,630	./.	./.	0/0:10,0:13:18.06:0,18,962	0/0:15,0:15:18.03:0,18,1072	0/0:31,0:31:30.04:0,30,1008	0/0:29,0:28:26.82:0,27,252	0/0:27,0:26:36.11:0,36,3076	0/0:19,0:18:27.20:0,27,1042	0/0:12,0:12:11.31:0,11,906	0/0:31,0:31:50.37:0,50,3049	0/0:15,0:15:15.52:0,16,1208	0/0:22,0:22:30.51:0,31,1437	0/0:29,0:29:36.09:0,36,2194	0/0:37,0:36:57.10:0,57,3826	0/1:24,0:24:99:143,0,193	0/0:28,0:27:39.06:0,39,2657	0/0:21,0:21:9.01:0,9,312	0/0:12,0:11:3.01:0,3,75	0/0:37,0:33:30.05:0,30,1039	0/0:18,0:18:18.06:0,18,933	1/1:12,0:11:2.86:341,3,0	0/1:25,17:42:29.19:525,0,29	0/0:14,0:13:15.02:0,15,520	0/0:18,0:18:32.75:0,33,1248	0/0:16,0:16:24.48:0,24,654	0/0:2,0:2:2.99:0,3,24
chr10	69473930	.	G	GA	2059.23	PASS	AB=0.590;AC=7;AF=0.125;AN=56;BaseQRankSum=-8.381;DP=591;FS=3.638;HRun=8;HaplotypeScore=70.7463;InbreedingCoeff=0.9167;MQ=81.43;MQ0=1;MQRankSum=-1.918;QD=21.45;ReadPosRankSum=0.436;VQSLOD=3.8654;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,25:30:60.18:690,60,0	0/0:13,0:13:33:0,33,297	0/0:25,0:25:40.85:0,41,344	0/0:20,0:17:24.88:0,25,178	0/1:7,16:23:0.54:463,0,1	0/0:36,0:36:96.04:0,96,878	0/0:25,0:25:66.02:0,66,601	0/0:26,0:26:63.01:0,63,573	0/0:19,0:19:54:0,54,485	0/0:19,0:19:50.99:0,51,459	0/0:17,0:17:48.02:0,48,439	0/0:18,0:18:44.97:0,45,393	0/0:17,0:17:42.01:0,42,384	0/0:20,0:20:45.02:0,45,412	0/0:18,0:18:48.01:0,48,435	0/0:15,0:15:45.02:0,45,411	1/1:6,22:28:63.10:710,63,0	1/1:4,11:15:30.09:346,30,0	0/0:27,0:27:56.97:0,57,514	0/0:22,0:22:60.03:0,60,548	0/0:13,0:13:30.01:0,30,274	0/0:20,0:20:41.97:0,42,376	0/0:24,0:24:57.03:0,57,521	0/0:15,0:15:33:0,33,298	0/0:10,0:10:27.01:0,27,247	0/0:30,0:30:84.05:0,84,769	0/0:25,0:25:66.03:0,66,602	0/0:20,0:20:41.98:0,42,377
chr10	69473941	.	C	CA	3828.17	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-11.542;DP=590;FS=6.136;HRun=8;HaplotypeScore=66.1128;InbreedingCoeff=0.9989;MQ=76.54;MQ0=1;MQRankSum=-2.086;QD=27.34;ReadPosRankSum=1.447;VQSLOD=4.4068;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:63:0,63,567	0/0:15,0:15:45.01:0,45,406	0/0:20,0:19:40.71:0,41,352	0/0:18,1:16:32.77:0,33,239	0/0:24,0:24:43.03:0,43,465	0/0:35,0:35:96:0,96,867	0/0:22,0:22:57.03:0,57,522	0/0:25,0:25:57.01:0,57,515	0/0:26,0:26:59.95:0,60,531	0/0:21,0:21:57.03:0,57,519	0/0:18,0:18:48.01:0,48,439	0/0:18,0:18:51.03:0,51,467	0/0:19,0:19:44.74:0,45,391	0/0:21,0:21:57.01:0,57,517	0/0:20,0:20:47.99:0,48,431	0/0:18,0:18:45:0,45,407	0/0:24,0:24:56.90:0,57,499	0/0:15,0:15:32.93:0,33,282	1/1:6,18:25:66.01:726,66,0	1/1:2,20:22:54.12:608,54,0	1/1:1,12:13:33.10:381,33,0	0/0:21,0:21:50.97:0,51,451	0/0:21,0:21:57.03:0,57,521	0/0:13,0:13:35.99:0,36,324	0/0:9,0:9:21.01:0,21,192	1/1:8,23:32:75.01:816,75,0	1/1:5,20:25:35.70:653,36,0	1/1:1,22:23:47.33:645,47,0
chr10	69474424	.	GA	G	1359.92	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=4.802;DP=543;FS=7.986;HRun=9;HaplotypeScore=60.1087;InbreedingCoeff=0.9619;MQ=60.95;MQ0=4;MQRankSum=0.038;QD=20.60;ReadPosRankSum=1.018;VQSLOD=4.3041;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,39:41:96.05:879,96,0	0/0:12,0:12:36.10:0,36,410	0/0:10,0:6:15:0,15,168	0/0:13,0:8:12.20:0,12,102	1/1:2,23:25:66.03:603,66,0	0/0:11,0:12:29.92:0,30,326	0/0:17,1:18:17.66:0,18,447	0/0:29,0:29:84.25:0,84,969	0/0:15,1:17:20.51:0,21,471	0/0:16,0:17:47.89:0,48,516	0/0:19,0:19:45.10:0,45,506	0/0:10,0:10:24.03:0,24,262	0/0:14,0:14:36.09:0,36,404	0/0:11,0:11:30.09:0,30,346	0/0:29,0:29:81.24:0,81,934	0/0:17,0:17:42.11:0,42,474	0/0:26,0:26:66.63:0,67,748	0/0:14,0:14:30.05:0,30,332	0/0:30,1:30:78.23:0,78,900	0/0:35,0:33:70.19:0,70,1006	0/0:7,0:7:21.06:0,21,242	0/0:24,0:23:63.19:0,63,727	0/0:18,1:19:26.68:0,27,551	0/0:22,0:22:60.18:0,60,692	0/0:17,0:17:48.60:0,49,546	0/0:24,0:24:63.19:0,63,727	0/0:24,0:24:63.19:0,63,727	0/0:6,0:6:18.02:0,18,194
chr10	69474534	.	G	GA	7094.75	PASS	AB=0.933;AC=25;AF=0.446;AN=56;BaseQRankSum=-12.701;DP=581;FS=14.820;HRun=9;HaplotypeScore=56.8199;InbreedingCoeff=0.9247;MQ=82.06;MQ0=0;MQRankSum=-3.161;QD=23.73;ReadPosRankSum=-0.938;VQSLOD=3.9174;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,21:27:45.57:695,46,0	0/0:8,0:8:24:0,24,208	0/0:23,0:24:31.38:0,31,317	0/1:13,0:14:14.35:14,0,129	1/1:5,18:23:28.09:538,28,0	0/0:13,0:13:32.99:0,33,286	0/0:22,0:22:56.97:0,57,495	1/1:4,29:33:87.20:942,87,0	0/0:19,0:19:41.98:0,42,365	0/0:31,0:31:77.97:0,78,677	0/0:19,1:20:11.80:0,12,331	0/0:22,0:22:35.52:0,36,467	0/0:17,0:17:44.99:0,45,391	0/0:14,0:14:38.99:0,39,338	0/0:23,0:23:65.98:0,66,573	0/0:13,0:13:29.96:0,30,257	1/1:5,19:24:31.10:571,31,0	0/0:17,0:17:41.98:0,42,365	1/1:3,21:24:63.15:686,63,0	1/1:3,21:24:57.15:631,57,0	1/1:2,13:15:24.06:265,24,0	0/0:15,0:15:32.99:0,33,286	1/1:5,22:27:28.56:539,29,0	1/1:3,21:24:63.17:697,63,0	0/0:24,0:24:62.97:0,63,547	1/1:7,14:21:42.09:454,42,0	1/1:2,24:25:63.17:697,63,0	1/1:1,16:16:33.09:365,33,0
chr10	69474836	.	GA	G	4417.56	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=13.510;DP=589;FS=11.210;HRun=6;HaplotypeScore=56.7742;InbreedingCoeff=0.9670;MQ=78.34;MQ0=0;MQRankSum=-1.269;QD=28.32;ReadPosRankSum=0.659;VQSLOD=4.7442;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:54.16:0,54,696	0/0:14,0:14:36.12:0,36,473	0/0:13,0:13:18.38:0,18,212	0/0:11,1:13:3:0,3,145	0/0:31,0:31:87.27:0,87,1125	0/0:34,0:34:87.28:0,87,1140	0/0:14,0:14:39.13:0,39,513	0/0:35,0:35:99:0,99,1301	0/0:20,0:20:60.19:0,60,786	0/0:37,0:37:99:0,102,1317	0/0:22,0:22:63.19:0,63,815	0/0:24,0:24:63.20:0,63,829	0/0:26,0:26:75.22:0,75,958	0/0:20,0:20:54.18:0,54,710	0/0:21,0:21:60.19:0,60,777	0/0:19,0:19:57.18:0,57,745	1/1:1,19:20:54.14:580,54,0	1/1:1,9:10:27.07:290,27,0	1/1:1,16:17:48.09:499,48,0	1/1:1,26:27:75.12:792,75,0	1/1:2,12:14:36.09:387,36,0	0/0:12,0:12:33.10:0,33,421	0/0:25,0:25:69.22:0,69,908	0/0:13,0:13:36.12:0,36,471	0/0:20,0:20:57.18:0,57,745	1/1:3,21:24:60.15:645,60,0	1/1:1,38:39:99:1064,99,0	1/1:0,5:5:15.04:161,15,0
chr10	69475168	.	TAA	T	1445.12	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.821;DP=559;FS=0.667;HRun=2;HaplotypeScore=65.4130;InbreedingCoeff=0.9950;MQ=91.53;MQ0=0;MQRankSum=-0.424;QD=42.50;ReadPosRankSum=-3.043;VQSLOD=2.8146;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:78.22:0,78,1474	0/0:10,0:10:30.07:0,30,504	0/0:26,0:26:75.19:0,75,1253	0/0:20,0:20:57.01:0,57,1030	0/0:23,0:23:69.22:0,69,1331	0/0:24,0:24:72.21:0,72,1355	0/0:11,0:11:33.07:0,33,562	1/1:0,34:34:99:1540,102,0	0/0:12,0:12:36.12:0,36,721	0/0:19,0:19:57.20:0,57,1157	0/0:24,0:24:72.23:0,72,1426	0/0:20,0:20:60.19:0,60,1151	0/0:25,0:25:75.24:0,75,1437	0/0:13,0:13:39.11:0,39,711	0/0:37,0:37:99:0,111,2219	0/0:22,0:22:66.22:0,66,1307	0/0:21,0:21:63.22:0,63,1265	0/0:16,0:16:48.16:0,48,953	0/0:14,0:14:42.12:0,42,784	0/0:23,0:23:69.21:0,69,1353	0/0:16,0:16:48.16:0,48,940	0/0:17,0:17:51.16:0,51,988	0/0:19,0:19:57.20:0,57,1157	0/0:17,0:17:51.13:0,51,995	0/0:20,0:20:60.21:0,60,1219	0/0:15,0:15:45.15:0,45,882	0/0:28,0:28:84.27:0,84,1649	0/0:7,0:7:21.07:0,21,426
chr10	69476286	.	CATTTTTATTTTT	C	6150.06	PASS	AB=0.676;AC=11;AF=0.204;AN=54;BaseQRankSum=8.807;DP=482;FS=0.536;HRun=0;HaplotypeScore=171.8632;InbreedingCoeff=0.7693;MQ=75.14;MQ0=0;MQRankSum=-8.631;QD=42.41;ReadPosRankSum=1.813;VQSLOD=4.2818;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:18:18.06:0,18,275	0/0:10,0:10:18.06:0,18,960	0/0:10,0:10:11.95:0,12,176	0/0:13,0:11:8.37:0,8,100	0/0:11,0:26:45.14:0,45,640	0/0:25,0:25:57.20:0,57,3210	0/0:12,0:12:15.05:0,15,608	0/0:33,0:33:36.11:0,36,1468	0/0:9,0:9:12.04:0,12,603	0/0:17,0:17:36.12:0,36,2055	0/0:22,0:22:36.12:0,36,2052	0/0:17,0:17:33.09:0,33,1681	0/0:13,0:13:27.09:0,27,1450	0/0:20,0:20:39.13:0,39,2076	0/0:12,0:12:18.05:0,18,779	0/0:11,0:11:24.08:0,24,1409	1/1:10,5:15:6.02:208,6,0	1/1:6,3:9:6.02:208,6,0	1/1:14,7:21:18.01:479,18,0	1/1:13,31:44:84.24:2801,84,0	0/0:14,2:16:3.63:0,4,10	0/0:10,0:10:18.05:0,18,782	0/0:15,0:15:30.09:0,30,1482	0/0:7,0:7:15.05:0,15,880	0/0:15,0:15:39.13:0,39,1770	0/1:13,12:25:99:1207,0,310	1/1:15,16:31:36.02:1248,36,0	./.
chr10	69478737	.	TCCGGG	T	374.92	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.113;DP=670;FS=5.346;HRun=0;HaplotypeScore=129.8252;InbreedingCoeff=0.9428;MQ=86.42;MQ0=0;MQRankSum=-4.814;QD=17.04;ReadPosRankSum=0.871;VQSLOD=2.7612;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,148,4590	0/0:10,0:10:30.10:0,30,932	0/0:31,0:31:81.26:0,81,2322	0/0:17,0:17:45.14:0,45,1135	0/0:24,0:24:72.23:0,72,2175	0/0:24,0:24:69.24:0,69,2108	0/0:33,0:33:99:0,99,3025	0/0:41,0:41:99:0,120,3548	0/0:26,0:26:72.23:0,72,2098	0/0:14,0:14:42.14:0,42,1295	0/0:18,0:18:54.19:0,54,1674	0/0:25,0:25:75.26:0,75,2349	0/0:20,0:20:57.20:0,57,1780	0/0:25,0:25:75.26:0,75,2299	0/0:34,0:34:96.33:0,96,2962	0/0:18,0:18:54.19:0,54,1691	1/1:9,13:22:24.05:468,24,0	0/0:23,0:23:66.23:0,66,2047	0/0:23,0:23:60.21:0,60,1855	0/0:28,0:28:84.29:0,84,2554	0/0:29,0:29:84.29:0,84,2624	0/0:20,0:20:57.20:0,57,1783	0/0:23,0:23:63.22:0,63,1925	0/0:21,0:21:57.15:0,57,1685	0/0:15,0:15:45.15:0,45,1367	0/0:23,0:23:69.23:0,69,2080	0/0:29,0:29:87.30:0,87,2725	0/0:3,0:3:9.03:0,9,281
chr10	69478968	.	GA	G	1517.28	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=11.688;DP=627;FS=2.304;HRun=8;HaplotypeScore=69.0003;InbreedingCoeff=0.9695;MQ=83.42;MQ0=0;MQRankSum=-4.962;QD=21.37;ReadPosRankSum=0.506;VQSLOD=3.8792;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,42:51:99:1150,120,0	0/0:8,0:8:24.06:0,24,280	0/0:24,0:24:35.98:0,36,621	0/0:16,0:16:37.33:0,37,410	1/1:2,18:20:51.07:489,51,0	0/0:24,0:24:69.21:0,69,834	0/0:25,0:25:75.15:0,75,873	0/0:32,0:32:84.26:0,84,1012	0/0:18,0:18:51.16:0,51,616	0/0:27,0:27:66.20:0,66,797	0/0:22,0:22:57.17:0,57,689	0/0:22,0:22:57.16:0,57,677	0/0:27,0:27:75.23:0,75,902	0/0:14,0:14:36.11:0,36,434	0/0:28,0:28:69.20:0,69,823	0/0:16,0:16:45.14:0,45,544	0/0:33,0:33:99:0,99,1154	0/0:30,0:30:87.26:0,87,1043	0/0:19,0:20:57.04:0,57,666	0/0:16,0:16:48.13:0,48,568	0/0:23,1:24:37.35:0,37,719	0/0:16,0:16:45.12:0,45,521	0/0:18,0:18:48.14:0,48,569	0/0:27,0:27:75.21:0,75,894	0/0:16,0:16:42.10:0,42,493	0/0:23,0:23:63.17:0,63,740	0/0:27,0:27:81.22:0,81,953	0/0:3,0:3:9.03:0,9,109
chr10	69479725	.	GC	G	2922.36	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=10.915;DP=712;FS=15.180;HRun=2;HaplotypeScore=66.2536;InbreedingCoeff=0.9937;MQ=87.40;MQ0=0;MQRankSum=-2.490;QD=35.64;ReadPosRankSum=4.363;VQSLOD=2.5349;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,33:33:93.30:1207,93,0	0/0:9,0:9:27.09:0,27,405	0/0:27,0:27:80.82:0,81,1113	0/0:21,0:21:60.18:0,60,897	1/1:0,28:28:81.26:1050,81,0	0/0:27,0:27:78.26:0,78,1168	0/0:11,0:11:30.10:0,30,448	0/0:31,0:31:90.29:0,90,1310	0/0:27,0:27:81.27:0,81,1213	0/0:34,0:34:99:0,99,1449	0/0:21,0:21:60.20:0,60,894	0/0:30,0:30:90.28:0,90,1322	0/0:28,0:28:81.27:0,81,1213	0/0:24,0:24:72.24:0,72,1079	0/0:42,0:42:99:0,126,1888	0/0:25,0:25:75.25:0,75,1123	1/1:0,21:21:63.20:807,63,0	0/0:11,0:11:33.11:0,33,493	0/0:23,0:23:63.19:0,63,899	0/0:31,0:31:93.31:0,93,1391	0/0:20,0:20:60.19:0,60,878	0/0:36,0:36:99:0,105,1547	0/0:31,0:31:90.30:0,90,1349	0/0:18,0:18:54.18:0,54,809	0/0:34,0:34:99:0,102,1528	0/0:28,0:28:78.26:0,78,1169	0/0:36,0:36:99:0,108,1611	0/0:5,0:5:15.05:0,15,221
chr10	69481162	.	CACATACAG	C	2334.31	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.330;DP=776;FS=0.676;HRun=0;HaplotypeScore=201.2082;InbreedingCoeff=0.9988;MQ=68.89;MQ0=4;MQRankSum=-8.229;QD=37.05;ReadPosRankSum=-1.505;VQSLOD=3.2696;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:72.25:0,72,3048	0/0:19,0:19:51.18:0,51,2193	0/0:51,0:44:99:0,111,3945	0/0:38,0:21:38.97:0,39,1232	0/0:33,0:33:90.31:0,90,3829	0/0:24,0:24:60.21:0,60,2513	0/0:19,0:19:45.15:0,45,1746	1/1:9,14:23:42.13:1071,42,0	0/0:29,0:29:84.29:0,84,3467	0/0:31,0:31:87.30:0,87,3629	0/0:29,0:29:75.26:0,75,3208	0/0:29,0:29:66.23:0,66,2669	0/0:27,0:27:78.27:0,78,3118	0/0:32,0:32:84.29:0,84,3545	0/0:32,0:32:93.30:0,93,3853	0/0:30,0:30:75.24:0,75,3120	0/0:32,0:32:96.31:0,96,3846	0/0:22,0:22:60.21:0,60,2558	0/0:18,0:17:30.09:0,30,932	0/0:37,0:37:96.32:0,96,3942	0/0:23,0:23:63.22:0,63,2672	0/0:27,0:27:66.23:0,66,2671	1/1:2,12:14:29.91:759,30,0	1/1:9,17:26:24.02:647,24,0	0/0:20,0:20:57.20:0,57,2329	0/0:35,0:35:99:0,102,4317	0/0:37,0:37:99:0,108,4312	0/0:11,0:11:33.11:0,33,1419
chr10	69482175	.	C	CT	956.45	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.879;DP=780;FS=0.759;HRun=2;HaplotypeScore=74.2749;InbreedingCoeff=0.9413;MQ=84.36;MQ0=0;MQRankSum=-0.424;QD=35.42;ReadPosRankSum=1.801;VQSLOD=4.2247;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:64,0:64:99:0,193,2341	0/0:7,0:7:21.07:0,21,260	0/0:25,0:25:69.20:0,69,831	0/0:25,0:25:63.13:0,63,733	0/0:27,0:27:81.25:0,81,1003	0/0:31,0:31:87.27:0,87,1078	0/0:32,0:32:93.28:0,93,1140	0/0:31,0:31:90.25:0,90,1074	0/0:24,0:24:69.20:0,69,842	0/0:34,0:34:99:0,99,1227	0/0:22,0:22:66.19:0,66,805	0/0:28,0:28:81.25:0,81,1004	0/0:30,0:30:90.26:0,90,1100	0/0:33,0:33:99:0,99,1172	0/0:42,0:42:99:0,120,1487	0/0:29,0:29:87.25:0,87,1055	1/1:4,23:27:75.22:1051,75,0	0/0:14,0:14:39.08:0,39,466	0/0:24,0:24:69.08:0,69,833	0/0:24,0:24:69.22:0,69,855	0/0:34,0:34:99:0,99,1225	0/0:28,0:28:84.24:0,84,1017	0/0:24,0:24:72.21:0,72,879	0/0:30,0:30:90.22:0,90,1085	0/0:33,0:33:99:0,99,1226	0/0:27,0:27:78.22:0,78,943	0/0:28,0:28:84.26:0,84,1041	0/0:3,0:3:8.99:0,9,95
chr10	69482182	.	TTG	T	873.52	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.912;DP=791;FS=0.789;HRun=0;HaplotypeScore=91.9199;InbreedingCoeff=0.9036;MQ=82.25;MQ0=0;MQRankSum=-3.294;QD=33.60;ReadPosRankSum=1.934;VQSLOD=5.4814;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:66,0:66:99:0,196,3559	0/0:8,0:8:24.08:0,24,449	0/0:22,0:22:60.20:0,60,1088	0/0:24,0:24:51.32:0,51,1000	0/0:27,0:26:78.25:0,78,1417	0/0:31,0:31:87.30:0,87,1618	0/0:29,0:29:87.30:0,87,1601	0/0:33,0:33:93.32:0,93,1726	0/0:27,0:27:81.26:0,81,1464	0/0:34,0:34:99:0,99,1678	0/0:25,0:25:75.26:0,75,1394	0/0:30,0:30:87.28:0,87,1576	0/0:28,0:28:84.25:0,84,1479	0/0:34,0:34:99:0,102,1899	0/0:41,0:41:99:0,120,2238	0/0:30,0:30:87.28:0,87,1588	1/1:1,25:26:65.96:968,66,0	0/0:13,0:13:39.13:0,39,730	0/0:26,0:26:69.21:0,69,1222	0/0:29,0:29:87.28:0,87,1597	0/0:36,0:36:99:0,105,1857	0/0:27,0:27:81.28:0,81,1516	0/0:24,0:24:66.23:0,66,1214	0/0:32,0:32:93.24:0,93,1615	0/0:34,0:34:99:0,99,1821	0/0:25,0:25:75.26:0,75,1405	0/0:28,0:28:84.29:0,84,1562	0/0:2,0:2:6.02:0,6,112
chr10	69483063	.	AT	A	4847.44	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=11.270;DP=756;FS=4.069;HRun=4;HaplotypeScore=74.3672;InbreedingCoeff=0.9760;MQ=83.63;MQ0=0;MQRankSum=-2.206;QD=31.89;ReadPosRankSum=2.238;VQSLOD=5.5649;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,43:45:99:1500,126,0	0/0:19,0:19:57.19:0,57,786	0/0:25,0:25:42.56:0,43,848	0/0:22,0:22:60.19:0,60,788	1/1:1,32:33:90.28:1080,90,0	0/0:28,0:28:78.26:0,78,1091	0/0:33,0:33:90.30:0,90,1259	0/0:28,0:28:78.26:0,78,1093	0/0:31,0:31:93.30:0,93,1285	0/0:23,0:23:66.22:0,66,910	0/0:20,0:20:54.18:0,54,750	0/0:20,0:20:60.20:0,60,839	0/0:26,0:26:75.24:0,75,1034	0/0:48,0:48:99:0,138,1909	0/0:40,0:40:99:0,111,1536	0/0:26,0:26:72.23:0,72,990	1/1:0,20:20:54.17:648,54,0	0/0:15,0:15:42.14:0,42,588	0/0:13,0:13:36.12:0,36,503	0/0:23,0:23:60.19:0,60,824	0/0:38,0:38:99:0,108,1461	0/0:33,0:33:90.27:0,90,1213	1/1:1,29:30:81.25:972,81,0	1/1:1,23:24:54.17:648,54,0	0/0:29,0:29:84.27:0,84,1158	0/0:31,0:31:90.29:0,90,1244	0/0:31,0:31:93.29:0,93,1268	0/0:2,0:2:6.02:0,6,84
chr10	69485489	.	CA	C	11477.10	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=21.206;DP=712;FS=0.570;HRun=3;HaplotypeScore=119.1508;InbreedingCoeff=0.9978;MQ=88.80;MQ0=0;MQRankSum=-3.841;QD=33.96;ReadPosRankSum=1.367;VQSLOD=4.2132;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,45:46:99:1524,123,0	0/0:12,0:12:36.12:0,36,518	0/0:31,0:31:81.11:0,81,1200	0/0:23,1:23:57.12:0,57,772	1/1:0,22:22:63.20:780,63,0	0/0:20,0:20:57.16:0,57,784	0/0:22,0:22:63.20:0,63,890	1/1:1,26:27:78.25:966,78,0	0/0:31,0:31:93.28:0,93,1299	0/0:18,0:18:51.17:0,51,735	0/0:16,0:16:45.12:0,45,622	0/0:19,0:19:51.16:0,51,717	0/0:43,0:43:99:0,126,1793	0/0:25,0:25:72.23:0,72,1020	0/0:40,0:40:99:0,120,1672	0/0:29,0:29:84.28:0,84,1209	1/1:0,25:25:69.22:855,69,0	1/1:2,18:20:60.08:707,60,0	1/1:2,20:22:60.04:704,60,0	1/1:1,27:29:81.25:1003,81,0	1/1:0,39:39:99:1375,111,0	0/0:21,0:21:60.19:0,60,842	1/1:0,20:20:51.16:632,51,0	1/1:2,32:34:87.27:1078,87,0	0/0:23,0:23:69.22:0,69,975	1/1:2,24:26:75.22:917,75,0	1/1:3,19:22:63.13:751,63,0	1/1:0,6:6:15.05:186,15,0
chr10	69486309	.	CGTGTG	C	3442.56	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=9.289;DP=797;FS=33.080;HRun=0;HaplotypeScore=200.4878;InbreedingCoeff=0.9262;MQ=60.87;MQ0=17;MQRankSum=-5.462;QD=22.65;ReadPosRankSum=-1.413;VQSLOD=1.7829;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:42:42.78:0,43,856	0/0:12,0:17:44.86:0,45,856	0/0:27,0:15:42:0,42,523	0/0:31,0:14:30.97:0,31,412	0/0:30,0:29:41.95:0,42,506	0/0:18,0:19:42.14:0,42,972	0/0:24,0:27:75.25:0,75,1692	0/0:24,0:24:69.23:0,69,1539	0/0:17,0:25:63.21:0,63,1356	0/0:22,0:22:64.46:0,64,1580	0/0:19,0:24:66.22:0,66,1767	0/0:37,0:40:99:0,113,3219	0/0:32,0:34:82.78:0,83,2317	0/0:23,0:29:74.77:0,75,1787	0/0:33,0:39:99:0,102,2547	0/0:23,0:28:74.34:0,74,1915	0/0:34,0:34:70.93:0,71,1315	0/0:33,0:33:89.11:0,89,1809	1/1:1,19:20:42.72:765,43,0	1/1:0,25:25:9.03:209,9,0	1/1:2,22:25:2.60:48,3,0	0/0:24,0:24:72.23:0,72,1802	0/0:29,0:29:40.65:0,41,741	0/0:37,0:37:48.03:0,48,1081	0/0:23,0:26:72.24:0,72,1826	1/1:1,27:29:48.74:1094,49,0	1/1:1,32:35:54.19:1208,54,0	1/1:0,4:5:6.02:119,6,0
chr10	69486317	.	T	TGC	2659.81	PASS	AB=1.000;AC=16;AF=0.286;AN=56;BaseQRankSum=7.127;DP=834;FS=0.363;HRun=0;HaplotypeScore=184.8605;InbreedingCoeff=0.6052;MQ=55.07;MQ0=14;MQRankSum=-3.293;QD=8.64;ReadPosRankSum=-1.512;VQSLOD=3.1577;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:43,0:42:35.05:267,35,0	0/0:18,0:18:47.82:0,48,417	0/0:30,0:15:35.25:0,35,307	0/0:31,0:11:22.28:0,22,226	1/1:32,0:31:20.26:158,20,0	0/0:21,0:21:50.96:0,51,480	0/0:33,0:33:86.85:0,87,928	0/1:30,0:30:99:235,0,143	0/1:24,0:24:72.69:73,0,368	0/0:25,0:25:74.57:0,75,803	0/0:24,0:24:63.03:0,63,739	0/0:39,0:39:96.17:0,96,1442	0/0:32,0:32:84.15:0,84,1087	0/0:34,0:33:83.96:0,84,942	0/0:41,0:41:90.07:0,90,1207	0/0:28,0:28:80.96:0,81,919	1/1:30,4:35:67.58:538,68,0	1/1:29,5:34:52.21:717,52,0	0/0:23,0:21:14.76:0,15,156	0/0:30,0:27:2.23:0,2,6	0/0:34,0:30:3.83:0,4,24	0/0:26,0:26:69.08:0,69,824	1/1:24,4:28:26.93:307,27,0	1/1:31,9:40:53.84:538,54,0	0/0:26,0:25:72.04:0,72,839	0/0:31,0:31:3.55:0,4,123	0/1:35,0:34:6.29:6,0,40	0/1:7,0:7:10.34:10,0,15
chr10	69486338	.	G	GGC	4376.41	PASS	AB=0.888;AC=20;AF=0.357;AN=56;BaseQRankSum=12.972;DP=713;FS=34.002;HRun=0;HaplotypeScore=183.7088;InbreedingCoeff=0.4933;MQ=58.46;MQ0=2;MQRankSum=-12.584;QD=14.26;ReadPosRankSum=2.778;VQSLOD=2.7826;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:32,0:31:39.63:134,0,40	0/0:13,0:13:32.94:0,33,388	0/0:19,0:14:36.17:0,36,498	0/0:27,0:12:20.60:0,21,342	1/1:29,0:28:2.73:36,3,0	0/0:18,0:18:51.06:0,51,633	0/0:31,0:31:87.16:0,87,1248	0/1:28,1:29:80.46:466,0,80	0/0:20,0:20:23.55:0,24,418	0/0:28,0:28:75.72:0,76,1172	0/0:25,0:25:60.07:0,60,838	0/0:41,0:41:99:0,113,1663	0/0:32,0:32:93.28:0,93,1437	0/0:35,0:34:93.09:0,93,1286	0/0:30,0:30:79.69:0,80,1137	0/0:25,0:25:74.95:0,75,1005	0/1:25,3:28:39.70:315,0,40	0/1:22,3:25:29.11:547,0,29	1/1:14,0:14:36.04:452,36,0	1/1:16,0:16:26.89:290,27,0	1/1:21,0:21:11.77:131,12,0	0/0:30,0:30:76.66:0,77,1247	0/1:20,4:25:54.70:119,0,55	0/1:22,12:35:24.36:418,0,24	0/0:32,0:31:87.17:0,87,1259	1/1:24,0:24:47.71:696,48,0	1/1:24,0:24:68.82:601,69,0	1/1:5,0:5:15.01:173,15,0
chr10	69486340	.	G	GGCTC	7244.68	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=9.265;DP=661;FS=22.996;HRun=0;HaplotypeScore=172.4334;InbreedingCoeff=0.9596;MQ=60.91;MQ0=1;MQRankSum=-12.489;QD=27.03;ReadPosRankSum=-0.115;VQSLOD=3.2052;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:9,10:19:9.50:157,9,0	0/0:13,0:13:30.10:0,30,502	0/0:19,0:14:36.07:0,36,575	0/0:25,0:12:32.15:0,32,447	1/1:5,17:22:3.01:49,3,0	0/0:16,0:16:39.13:0,39,691	0/0:30,0:30:84.29:0,84,1506	1/1:23,0:23:57.08:947,57,0	0/0:19,0:19:48.07:0,48,681	0/0:27,0:27:75.24:0,75,1333	0/0:23,0:23:60.18:0,60,1004	0/0:38,0:38:99:0,102,1822	0/0:33,0:33:93.22:0,93,1616	0/0:33,0:33:90.29:0,90,1569	0/0:31,0:31:77.93:0,78,1245	0/0:23,0:23:63.21:0,63,1105	1/1:9,12:25:28.19:613,28,0	1/1:9,8:24:51.17:1144,51,0	1/1:18,0:18:51.07:814,51,0	1/1:17,0:17:32.63:433,33,0	1/1:22,0:22:14.80:248,15,0	0/0:30,0:30:75.26:0,75,1390	1/1:11,1:14:12.04:242,12,0	1/1:15,3:27:30.33:763,30,0	0/0:33,0:32:84.29:0,84,1512	1/1:24,0:24:67.80:916,68,0	1/1:24,0:24:68.82:691,69,0	1/1:7,0:7:15.02:227,15,0
chr10	69487181	.	CACAG	C	3065.87	PASS	AB=0.990;AC=26;AF=0.464;AN=56;BaseQRankSum=6.289;DP=602;FS=5.945;HRun=0;HaplotypeScore=119.2920;InbreedingCoeff=0.6939;MQ=61.06;MQ0=38;MQRankSum=-4.548;QD=9.52;ReadPosRankSum=0.589;VQSLOD=2.5625;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:36,0:34:48.55:345,49,0	0/0:10,0:10:17.75:0,18,287	0/0:60,0:26:10.04:0,10,258	0/1:55,0:25:15.93:16,0,193	1/1:8,0:7:11.94:93,12,0	0/0:21,0:20:48.89:0,49,641	0/0:31,0:27:56.94:0,57,828	1/1:20,0:16:26.83:260,27,0	0/0:11,0:10:3.99:0,4,131	0/0:17,0:12:14.70:0,15,474	0/0:18,0:18:23.84:0,24,367	0/0:15,0:15:32.58:0,33,474	0/1:12,0:12:1.56:2,0,408	0/0:21,0:20:33.11:0,33,493	0/0:14,0:13:36.02:0,36,490	0/0:15,0:15:29.78:0,30,423	1/1:15,0:12:28.66:200,29,0	0/1:21,0:20:6.45:196,0,6	1/1:7,5:11:29.23:256,29,0	1/1:20,0:20:11.50:364,11,0	1/1:32,0:26:32.73:268,33,0	0/0:27,0:25:59.61:0,60,741	1/1:13,0:12:17.90:135,18,0	1/1:35,0:34:41.39:327,41,0	0/0:20,0:19:23.75:0,24,555	0/1:22,1:20:41.11:419,0,41	1/1:6,0:6:11.84:82,12,0	1/1:13,1:13:5.15:315,5,0
chr10	69487183	.	CAG	C	2596.95	PASS	AB=0.973;AC=26;AF=0.464;AN=56;BaseQRankSum=6.884;DP=585;FS=1.337;HRun=0;HaplotypeScore=101.3072;InbreedingCoeff=0.5342;MQ=56.65;MQ0=40;MQRankSum=-1.123;QD=7.82;ReadPosRankSum=-0.391;VQSLOD=2.9432;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:35,0:33:52.88:397,53,0	0/0:9,0:9:17.75:0,18,259	0/0:55,0:21:10.04:0,10,258	0/1:53,0:23:15.36:15,0,191	1/1:8,0:7:12.41:93,12,0	0/0:22,0:20:19.29:0,19,499	0/0:29,0:25:27.67:0,28,638	1/1:21,0:17:30.59:303,31,0	0/0:10,0:9:3.99:0,4,131	0/1:17,0:12:13.51:14,0,286	0/0:18,0:18:23.84:0,24,313	0/0:16,0:16:35.68:0,36,409	0/1:12,0:12:1.57:2,0,334	0/0:20,0:19:26.01:0,26,355	0/0:14,0:13:24.25:0,24,340	0/0:14,0:14:20.20:0,20,338	1/1:13,2:12:29.32:234,29,0	1/1:21,0:20:6.78:223,7,0	1/1:12,0:11:7.19:127,7,0	0/1:18,1:19:8.32:245,0,8	1/1:32,0:25:23.28:186,23,0	0/0:27,0:25:36.48:0,36,512	1/1:12,0:11:17.88:141,18,0	1/1:32,2:33:41.43:352,41,0	0/0:19,0:18:23.75:0,24,485	0/1:21,1:19:21.06:267,0,21	1/1:4,1:5:4.70:80,5,0	0/1:13,1:13:19.62:120,0,20
chr10	69487185	.	GAC	G	168.06	PASS	AB=0.987;AC=16;AF=0.296;AN=54;BaseQRankSum=2.510;DP=596;FS=2.982;HRun=0;HaplotypeScore=112.9354;InbreedingCoeff=-0.1793;MQ=55.15;MQ0=43;MQRankSum=1.324;QD=0.62;ReadPosRankSum=1.769;VQSLOD=2.2287;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:35:18.32:0,18,143	0/0:9,0:9:14.12:0,14,138	./.	0/0:50,0:20:8.89:0,9,60	0/0:9,0:8:3.46:0,3,24	0/1:22,0:20:11.92:12,0,215	0/1:31,0:27:66.17:66,0,325	0/0:22,0:17:11.88:0,12,92	0/0:9,0:8:0.47:0,0,1	0/1:18,1:13:47.20:47,0,280	0/0:15,0:15:12.04:0,12,175	0/0:17,0:17:17.94:0,18,246	0/1:11,1:12:8.22:8,0,196	0/1:19,0:18:14.46:14,0,164	0/1:16,0:15:16.24:16,0,171	0/1:13,0:13:16.21:16,0,191	1/1:16,0:13:1.49:19,1,0	0/0:22,0:20:10.29:0,10,115	0/0:11,0:10:0.93:0,1,47	0/1:21,0:21:16.43:16,0,78	0/0:36,0:27:10.80:0,11,72	0/1:27,1:26:18.18:18,0,196	0/1:12,0:11:2.98:3,0,4	1/1:35,0:34:2.64:32,3,0	0/0:20,1:20:23.94:0,24,321	0/1:23,0:20:29.03:29,0,104	0/1:5,0:5:11.74:12,0,29	0/0:14,0:13:1.58:0,2,96
chr10	69487213	.	CAG	C	856.04	PASS	AB=1.000;AC=19;AF=0.365;AN=52;BaseQRankSum=6.783;DP=542;FS=4.878;HRun=0;HaplotypeScore=116.5163;InbreedingCoeff=0.0246;MQ=40.06;MQ0=51;MQRankSum=-4.546;QD=2.50;ReadPosRankSum=-2.013;VQSLOD=2.0162;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:25,0:19:1.98:96,0,2	0/1:8,0:7:1.52:2,0,75	./.	./.	0/1:16,0:14:0.54:18,0,1	0/1:18,0:16:0.98:1,0,163	0/0:35,0:30:4.82:0,5,171	0/1:30,0:21:24.20:24,0,65	0/1:8,0:6:5.38:5,0,6	0/1:34,0:26:35.98:36,0,284	0/0:8,8:16:11.96:0,12,94	0/0:14,0:14:0.19:0,0,267	0/0:11,0:11:8.04:0,8,112	0/1:21,0:19:37.90:38,0,142	0/0:13,0:12:9.01:0,9,178	0/0:12,0:12:9.94:0,10,115	1/1:17,1:14:23.35:177,23,0	0/1:24,0:21:36.41:107,0,36	0/0:7,0:6:5.50:0,5,69	0/0:19,0:19:3.60:0,4,75	0/1:38,0:26:14.84:15,0,42	0/0:29,0:27:10.85:0,11,230	1/1:15,0:15:14.85:105,15,0	1/1:34,1:33:19.10:196,19,0	0/0:24,0:22:35:0,35,276	0/1:26,0:22:46.56:63,0,47	0/1:13,0:12:1.01:78,0,1	0/1:14,0:12:46.68:47,0,59
chr10	69487215	.	GACACACACACACAC	G	82.65	PASS	AC=4;AF=0.077;AN=52;BaseQRankSum=2.548;DP=540;FS=1.184;HRun=0;HaplotypeScore=191.0808;InbreedingCoeff=0.5079;MQ=40.38;MQ0=51;MQRankSum=-1.762;QD=1.76;ReadPosRankSum=-2.017;VQSLOD=2.4247;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:19:10.76:0,11,83	0/0:9,0:8:14.36:0,14,304	./.	./.	0/0:16,0:14:2.99:0,3,24	0/0:18,0:16:12.04:0,12,439	0/0:35,0:30:18.07:0,18,202	1/1:19,11:21:22.95:173,23,0	0/0:8,0:6:2.04:0,2,6	0/0:26,0:26:48.30:0,48,1322	1/1:17,0:17:0.47:1,0,0	0/0:14,0:14:30.16:0,30,1041	0/0:11,0:11:16.76:0,17,537	0/0:22,0:20:27.34:0,27,430	0/0:13,0:12:12.35:0,12,500	0/0:12,0:12:11.55:0,12,378	0/0:18,0:14:11.92:0,12,222	0/0:24,0:21:14.30:0,14,189	0/0:9,0:8:8.97:0,9,84	0/0:18,0:19:9.03:0,9,267	0/0:39,0:27:18.02:0,18,234	0/0:30,0:28:21.07:0,21,894	0/0:17,0:16:0.47:0,0,1	0/0:35,0:33:9.81:0,10,283	0/0:24,0:22:22.48:0,22,618	0/0:18,0:23:10.42:0,10,672	0/0:13,0:12:15.88:0,16,107	0/0:13,0:11:0.02:0,0,169
chr10	69487253	.	CACCA	C	286.87	PASS	AB=0.982;AC=15;AF=0.288;AN=52;BaseQRankSum=1.623;DP=509;FS=8.657;HRun=0;HaplotypeScore=131.1267;InbreedingCoeff=0.2057;MQ=37.43;MQ0=40;MQRankSum=2.301;QD=1.41;ReadPosRankSum=1.410;VQSLOD=2.1688;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:39,0:33:53.78:54,0,166	0/1:6,1:6:0.42:0,0,87	./.	./.	0/0:24,0:23:10.19:0,10,57	0/1:22,0:18:51.20:51,0,164	0/0:25,0:20:20.98:0,21,235	0/0:26,0:22:51.32:0,51,504	1/1:3,4:6:3:29,3,0	0/0:28,0:26:13.18:0,13,588	1/1:14,0:14:2.01:12,2,0	0/0:18,0:18:9.80:0,10,401	0/0:16,0:16:18.60:0,19,222	0/1:19,0:18:30.78:31,0,259	0/0:20,0:20:27.21:0,27,400	0/0:8,0:7:6.84:0,7,161	0/0:16,0:15:24.69:0,25,190	0/0:17,0:14:24.25:0,24,241	0/0:11,0:9:23.88:0,24,229	0/0:14,0:13:8.67:0,9,55	0/0:31,0:20:15.87:0,16,177	0/0:23,0:21:2.83:0,3,320	1/1:18,0:16:5.20:28,5,0	1/1:37,0:36:36.39:197,36,0	0/1:22,0:21:11.15:11,0,293	0/0:27,0:24:13.67:0,14,309	0/1:13,0:12:12.11:12,0,34	0/1:6,0:4:11.71:12,0,26
chr10	69487256	.	CAG	C	641.88	PASS	AB=0.948;AC=19;AF=0.380;AN=50;BaseQRankSum=1.845;DP=520;FS=9.772;HRun=0;HaplotypeScore=122.5577;InbreedingCoeff=-0.0413;MQ=37.52;MQ0=37;MQRankSum=2.565;QD=2.06;ReadPosRankSum=-0.389;VQSLOD=1.7000;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:39,0:34:66.06:66,0,134	1/1:7,1:7:1.62:30,2,0	./.	./.	0/0:24,0:23:6.02:0,6,72	0/1:23,0:20:45.69:46,0,80	0/1:22,1:19:23.29:23,0,80	0/0:29,0:27:6:0,6,62	./.	0/1:29,0:27:25.49:25,0,135	1/1:15,0:15:2.80:32,3,0	0/0:19,0:19:14.98:0,15,191	0/0:15,0:15:9.50:0,10,132	0/1:17,1:17:40.77:64,0,41	0/1:17,1:19:28.43:28,0,153	0/1:7,1:7:23.55:24,0,80	0/0:18,0:17:16.28:0,16,177	0/0:17,0:14:12.04:0,12,175	0/0:15,0:13:15.05:0,15,197	0/0:13,0:12:0.47:0,0,1	1/1:31,0:20:0.47:1,0,0	0/1:21,0:19:26.30:26,0,38	1/1:17,0:16:6.49:66,6,0	1/1:38,1:38:0.90:330,1,0	0/1:17,1:19:23.27:23,0,59	0/0:29,0:26:27.07:0,27,332	0/0:16,0:15:5.51:0,6,48	0/0:6,0:4:3.01:0,3,36
chr10	69488177	.	C	CT	932.18	PASS	AB=0.902;AC=6;AF=0.107;AN=56;BaseQRankSum=-0.040;DP=558;FS=7.234;HRun=11;HaplotypeScore=56.7843;InbreedingCoeff=0.6491;MQ=64.27;MQ0=3;MQRankSum=-0.844;QD=9.05;ReadPosRankSum=-0.182;VQSLOD=1.9376;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:10,30:40:40.21:570,40,0	0/0:7,0:8:16.98:0,17,122	0/0:34,0:13:8.83:0,9,63	0/0:26,0:11:17.69:0,18,104	1/1:13,20:33:48.01:459,48,0	0/0:14,0:14:32.24:0,32,240	0/0:12,0:14:31.90:0,32,234	0/0:32,0:32:58.73:0,59,446	0/0:12,0:12:23.83:0,24,185	0/0:22,0:23:46.80:0,47,354	0/0:25,1:26:47.71:0,48,367	0/0:20,0:20:47.45:0,47,371	0/0:15,0:16:39.44:0,39,289	0/0:12,0:12:17.93:0,18,139	0/0:20,1:21:24.37:0,24,305	0/0:12,0:13:28.91:0,29,215	0/0:38,0:39:62.63:0,63,487	0/0:14,0:14:32.86:0,33,255	0/1:17,1:18:0.64:1,0,176	0/0:22,0:22:19.25:0,19,299	0/0:8,0:7:11.95:0,12,93	0/0:11,0:11:26.88:0,27,209	0/0:13,0:13:29.87:0,30,232	0/1:10,2:12:31.01:31,0,156	0/0:22,0:23:49.80:0,50,377	0/0:23,1:24:14.33:0,14,294	0/0:19,0:20:34.88:0,35,259	0/0:10,0:10:20.89:0,21,162
chr10	69490109	.	GGTCCTAA	G	1504.11	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.296;DP=582;FS=3.997;HRun=0;HaplotypeScore=134.0663;InbreedingCoeff=0.9690;MQ=60.75;MQ0=0;MQRankSum=-5.106;QD=55.71;ReadPosRankSum=-3.572;VQSLOD=2.6984;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:57.17:0,57,2190	0/0:14,0:14:42.14:0,42,1609	0/0:13,0:12:33.11:0,33,1244	0/0:12,0:12:36.12:0,36,1286	0/0:29,0:29:87.30:0,87,3531	0/0:23,0:23:69.17:0,69,2659	0/0:23,0:23:69.24:0,69,2683	1/1:3,24:27:69.16:1599,69,0	0/0:16,0:16:48.16:0,48,1838	0/0:21,0:21:60.21:0,60,2459	0/0:21,0:21:63.22:0,63,2543	0/0:18,0:18:54.19:0,54,2105	0/0:24,0:24:68.77:0,69,2736	0/0:15,0:15:45.15:0,45,1844	0/0:28,0:28:84.29:0,84,3320	0/0:27,0:27:78.27:0,78,3150	0/0:19,0:19:57.20:0,57,2291	0/0:19,0:19:54.19:0,54,2117	0/0:23,0:23:69.24:0,69,2615	0/0:23,0:23:69.24:0,69,2705	0/0:29,0:29:87.28:0,87,3429	0/0:24,0:24:69.24:0,69,2751	0/0:25,0:25:75.24:0,75,2897	0/0:9,0:9:27.09:0,27,1094	0/0:18,0:18:54.19:0,54,2199	0/0:25,0:25:72.25:0,72,2942	0/0:33,0:33:99:0,99,3943	0/0:4,0:4:12.04:0,12,491
chr10	69490493	.	CT	C	2122.26	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.108;DP=591;FS=1.736;HRun=2;HaplotypeScore=60.8937;InbreedingCoeff=0.9338;MQ=87.00;MQ0=0;MQRankSum=-3.177;QD=35.37;ReadPosRankSum=0.600;VQSLOD=4.0208;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,35:35:96.32:1342,96,0	0/0:4,0:4:12.04:0,12,192	0/0:29,0:29:63.86:0,64,1057	0/0:13,0:13:33.06:0,33,456	1/1:0,25:25:66.22:901,66,0	0/0:34,0:34:99:0,102,1564	0/0:18,0:18:54.18:0,54,861	0/0:25,0:25:75.25:0,75,1172	0/0:18,0:18:54.18:0,54,859	0/0:23,0:23:69.23:0,69,1091	0/0:20,0:20:60.19:0,60,933	0/0:24,0:24:72.22:0,72,1103	0/0:25,0:25:75.17:0,75,1162	0/0:23,0:23:69.24:0,69,1098	0/0:29,0:29:87.27:0,87,1344	0/0:26,0:26:78.27:0,78,1246	0/0:14,0:14:42.14:0,42,671	0/0:13,0:13:39.13:0,39,615	0/0:12,0:12:36.12:0,36,566	0/0:22,0:22:66.22:0,66,1025	0/0:21,0:21:63.21:0,63,992	0/0:19,0:19:57.19:0,57,905	0/0:27,0:26:75.22:0,75,1105	0/0:17,0:17:51.17:0,51,805	0/0:27,0:27:81.27:0,81,1269	0/0:27,0:27:81.28:0,81,1284	0/0:19,0:19:57.19:0,57,907	0/0:2,0:2:6:0,6,72
chr10	69490817	.	A	ATATTTTACTT	32954.53	PASS	AB=0.585;AC=25;AF=0.446;AN=56;BaseQRankSum=1.682;DP=731;FS=5.969;HRun=0;HaplotypeScore=210.2685;InbreedingCoeff=0.9023;MQ=67.37;MQ0=0;MQRankSum=-18.034;QD=95.80;ReadPosRankSum=-4.911;VQSLOD=3.1357;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:7,25:41:93.28:4267,93,0	0/0:8,0:8:24.07:0,24,666	0/0:24,0:23:37.50:0,38,1699	0/0:26,0:25:66.08:0,66,1817	1/1:4,15:28:63.10:2710,63,0	0/0:25,0:25:69.22:0,69,2022	0/0:30,0:30:78.23:0,78,2176	1/1:17,8:44:99:5069,126,0	0/0:25,0:25:75.26:0,75,2426	0/0:24,0:24:72.22:0,72,2060	0/0:28,0:28:72.23:0,72,2201	0/0:33,0:33:96.31:0,96,2969	0/0:33,0:33:93.21:0,93,2661	0/0:22,0:22:66.23:0,66,2142	0/0:29,0:29:81.28:0,81,2641	0/0:27,0:27:72.21:0,72,2143	1/1:9,10:26:48.13:2059,48,0	1/1:9,2:11:27.09:1103,27,0	1/1:9,4:24:66.22:2271,66,0	1/1:12,18:33:93.16:4177,93,0	1/1:9,2:18:20.99:640,21,0	0/0:23,0:23:66.20:0,66,2019	1/1:6,14:28:54.06:2410,54,0	1/1:5,8:19:30.10:1579,30,0	0/0:30,0:30:84.29:0,84,2738	0/1:9,11:31:99:2893,0,120	1/1:8,22:36:72.59:3619,73,0	1/1:0,1:1:3.01:159,3,0
chr10	69490899	.	AGGATGT	A	1107.91	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.368;DP=781;FS=1.969;HRun=0;HaplotypeScore=163.7244;InbreedingCoeff=0.9920;MQ=59.69;MQ0=2;MQRankSum=-5.195;QD=50.36;ReadPosRankSum=-2.849;VQSLOD=3.1894;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:45,0:45:99:0,123,4217	0/0:15,0:15:45.15:0,45,1624	0/0:22,0:22:66.22:0,66,2163	0/0:23,0:18:54.19:0,54,1920	0/0:34,0:34:87.17:0,87,2917	0/0:18,0:18:54.19:0,54,1915	0/0:31,0:30:87.30:0,87,3137	1/1:4,18:22:54.14:1203,54,0	0/0:31,0:31:90.31:0,90,3188	0/0:33,0:33:93.31:0,93,3316	0/0:28,0:28:84.29:0,84,3017	0/0:36,0:36:99:0,105,3651	0/0:39,0:39:99:0,111,3907	0/0:28,0:28:81.28:0,81,2893	0/0:22,0:22:66.23:0,66,2260	0/0:29,0:29:87.30:0,87,3154	0/0:38,0:37:90.31:0,90,3255	0/0:21,0:21:63.22:0,63,2184	0/0:22,0:22:66.23:0,66,2156	0/0:36,0:36:87.30:0,87,3115	0/0:30,0:30:87.30:0,87,3070	0/0:29,0:29:87.30:0,87,3067	0/0:32,0:32:72.13:0,72,2572	0/0:30,0:30:75.26:0,75,2717	0/0:14,0:14:42.14:0,42,1539	0/0:29,0:29:84.29:0,84,3025	0/0:38,0:37:99:0,108,3948	0/0:6,0:6:18.06:0,18,579
chr10	69491277	.	TA	T	8048.66	PASS	AB=1.000;AC=27;AF=0.482;AN=56;BaseQRankSum=16.423;DP=600;FS=1.815;HRun=8;HaplotypeScore=76.0776;InbreedingCoeff=0.9260;MQ=61.97;MQ0=0;MQRankSum=1.577;QD=23.19;ReadPosRankSum=1.574;VQSLOD=5.4939;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,20:22:54.08:520,54,0	0/0:11,0:11:30.09:0,30,362	0/0:7,0:6:9.01:0,9,94	0/1:15,0:13:9.65:10,0,131	1/1:1,31:32:90.08:856,90,0	0/0:27,0:27:78.24:0,78,941	0/0:9,0:9:18.01:0,18,182	1/1:3,34:37:99:960,102,0	0/0:16,0:16:42.12:0,42,496	0/0:17,0:17:45.10:0,45,493	0/0:27,1:28:43.34:0,43,769	0/0:24,0:24:66.19:0,66,787	0/0:15,0:15:42.13:0,42,507	0/0:19,0:19:57.13:0,57,645	0/0:21,0:21:60.16:0,60,703	0/0:16,0:16:39.10:0,39,451	1/1:2,27:29:66.10:637,66,0	1/1:0,19:19:54.09:521,54,0	1/1:4,21:25:60.08:574,60,0	1/1:7,29:36:91.23:923,91,0	1/1:2,14:16:33.05:318,33,0	0/0:12,0:12:33.08:0,33,379	1/1:0,26:26:62.32:606,62,0	1/1:2,16:18:28.19:414,28,0	0/0:31,0:31:84.24:0,84,993	1/1:7,22:29:63.01:582,63,0	1/1:2,30:32:90.14:868,90,0	1/1:2,9:11:27.04:260,27,0
chr10	69492536	.	G	GGTGTGTGTGT	7297.81	PASS	AB=1.000;AC=27;AF=0.482;AN=56;BaseQRankSum=9.964;DP=621;FS=2.292;HRun=0;HaplotypeScore=218.6657;InbreedingCoeff=0.8332;MQ=68.10;MQ0=5;MQRankSum=-11.530;QD=23.62;ReadPosRankSum=-5.724;VQSLOD=2.3536;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:24,1:29:15.05:457,15,0	0/0:7,0:7:15.05:0,15,368	0/0:32,0:20:9.03:0,9,164	0/1:30,0:25:11.21:11,0,19	1/1:20,0:24:6.01:208,6,0	0/0:18,0:20:39.13:0,39,1053	0/0:27,0:28:60.16:0,60,1599	1/1:26,0:25:21.07:584,21,0	0/0:17,0:17:33.02:0,33,778	0/0:29,0:30:63.15:0,63,1614	0/0:16,0:18:36.11:0,36,917	0/0:34,0:35:77.89:0,78,2085	0/0:21,0:21:45.08:0,45,1048	0/0:35,0:35:72.23:0,72,1879	0/0:14,0:15:33.09:0,33,799	0/0:18,0:17:36.12:0,36,1032	1/1:9,0:9:12:323,12,0	1/1:12,0:13:14.99:288,15,0	1/1:20,1:21:35.69:821,36,0	1/1:13,7:20:14.59:688,15,0	1/1:24,0:34:11.40:228,11,0	0/0:19,0:19:36.12:0,36,1026	1/1:11,0:11:3.01:72,3,0	1/1:21,0:21:8.38:204,8,0	0/0:16,0:16:42.14:0,42,1193	1/1:32,12:46:77.88:2730,78,0	1/1:11,6:18:14.26:531,14,0	1/1:3,1:4:3.01:151,3,0
chr10	69492706	.	C	CTTCTTCAAGT	18171.43	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-0.263;DP=421;FS=23.919;HRun=0;HaplotypeScore=119.0480;InbreedingCoeff=0.9740;MQ=91.82;MQ0=0;MQRankSum=-13.665;QD=106.27;ReadPosRankSum=-3.009;VQSLOD=2.9155;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,6:12:21.07:1083,21,0	0/0:6,0:6:15.05:0,15,494	0/0:20,0:20:57.19:0,57,1520	0/0:22,0:22:59.93:0,60,1576	1/1:2,6:10:30.10:1046,30,0	0/0:23,0:23:66.21:0,66,2083	0/0:22,0:22:60.19:0,60,1876	1/1:23,6:33:99:4084,99,0	0/0:23,0:23:63.20:0,63,1983	0/0:10,0:10:30.10:0,30,866	0/0:6,0:6:15.05:0,15,494	0/0:21,0:21:63.22:0,63,2025	0/0:21,0:21:63.22:0,63,1939	0/0:17,0:17:51.18:0,51,1658	0/0:18,0:18:54.19:0,54,1696	0/0:24,0:24:69.24:0,69,2256	1/1:5,5:11:27.09:1386,27,0	1/1:5,3:10:21.03:972,21,0	1/1:9,3:16:39.05:1285,39,0	1/1:3,4:9:21.07:725,21,0	1/1:9,2:13:27.09:1161,27,0	0/0:7,0:7:21.07:0,21,692	1/1:1,0:2:6.02:272,6,0	1/1:1,3:7:12.04:554,12,0	0/0:10,0:10:27.09:0,27,887	1/1:10,4:15:45.15:1720,45,0	1/1:10,8:23:54.66:2615,55,0	1/1:2,6:9:24.08:1267,24,0
chr10	69493342	.	A	AG	10700.37	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-10.303;DP=532;FS=20.213;HRun=1;HaplotypeScore=52.4391;InbreedingCoeff=0.9980;MQ=86.37;MQ0=0;MQRankSum=-8.775;QD=40.08;ReadPosRankSum=0.610;VQSLOD=2.8133;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,18:19:48.16:719,48,0	0/0:6,0:6:18.06:0,18,234	0/0:24,0:24:69.17:0,69,851	0/0:24,0:24:63.20:0,63,817	1/1:0,24:24:69.19:1006,69,0	0/0:21,0:21:63.19:0,63,803	0/0:9,0:9:24.01:0,24,291	1/1:0,32:33:99:1412,99,0	0/0:16,0:16:48.15:0,48,610	0/0:17,0:17:48.14:0,48,601	0/0:17,0:17:48.16:0,48,623	0/0:17,0:17:51.15:0,51,648	0/0:17,0:17:48.16:0,48,623	0/0:20,0:20:60.20:0,60,778	0/0:27,0:27:78.25:0,78,1011	0/0:23,0:23:69.20:0,69,860	1/1:0,25:25:72.24:1079,72,0	1/1:0,10:10:30.10:450,30,0	1/1:0,18:18:54.18:805,54,0	1/1:0,20:20:54.13:783,54,0	1/1:0,22:22:54.18:809,54,0	0/0:19,0:19:54.17:0,54,689	1/1:0,15:15:36.12:539,36,0	1/1:0,14:13:36.12:540,36,0	0/0:8,0:8:24.07:0,24,300	1/1:2,24:26:33.28:995,33,0	1/1:1,29:30:78.26:1158,78,0	1/1:0,11:11:27.09:404,27,0
chr10	69493502	.	T	TC	9950.97	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-15.205;DP=515;FS=2.406;HRun=3;HaplotypeScore=47.1432;InbreedingCoeff=0.9942;MQ=79.51;MQ0=0;MQRankSum=-1.655;QD=37.41;ReadPosRankSum=-1.552;VQSLOD=4.6039;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,21:25:57.19:798,57,0	0/0:4,0:4:12.04:0,12,144	0/0:15,0:15:41.26:0,41,444	0/0:9,0:9:24.05:0,24,274	1/1:2,22:24:63.21:882,63,0	0/0:16,0:16:45.14:0,45,540	0/0:18,0:18:51.14:0,51,601	1/1:0,23:23:69.21:933,69,0	0/0:15,0:15:39.12:0,39,468	0/0:19,0:19:57.17:0,57,684	0/0:18,0:18:54.17:0,54,648	0/0:15,0:15:39.12:0,39,468	0/0:18,0:18:51.16:0,51,612	0/0:21,0:21:63.17:0,63,733	0/0:22,0:22:66.19:0,66,781	0/0:14,0:14:42.11:0,42,492	1/1:1,26:27:75.25:1050,75,0	1/1:0,12:12:36.12:504,36,0	1/1:3,15:18:42.14:586,42,0	1/1:3,22:25:72.24:996,72,0	1/1:1,13:14:33.11:462,33,0	0/0:21,0:21:60.18:0,60,720	1/1:1,10:11:27.09:378,27,0	1/1:1,21:22:54.18:756,54,0	0/0:24,0:24:72.22:0,72,864	1/1:0,27:27:81.27:1134,81,0	1/1:0,32:32:87.29:1218,87,0	1/1:0,6:6:18.06:252,18,0
chr10	69495772	.	TGTATTCA	T	5445.51	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=12.421;DP=643;FS=0.985;HRun=0;HaplotypeScore=151.4416;InbreedingCoeff=0.9561;MQ=81.84;MQ0=0;MQRankSum=-13.009;QD=65.61;ReadPosRankSum=-0.456;VQSLOD=4.9084;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,18:18:42.14:1127,42,0	0/0:10,0:10:30.10:0,30,1097	0/0:22,0:22:65.71:0,66,2416	0/0:15,0:15:45.15:0,45,1686	1/1:0,32:32:78.27:2053,78,0	0/0:27,0:27:81.28:0,81,3374	0/0:20,0:20:60.19:0,60,2155	0/0:35,0:35:99:0,105,3994	0/0:15,0:15:45.15:0,45,1863	0/0:45,0:45:99:0,135,5350	0/0:30,0:30:90.26:0,90,3345	0/0:25,0:25:75.26:0,75,3097	0/0:22,0:22:66.23:0,66,2708	0/0:17,0:17:51.18:0,51,2122	0/0:42,0:42:99:0,126,4959	0/0:18,0:18:54.19:0,54,2160	1/1:0,9:9:26.83:683,27,0	1/1:0,3:3:6.02:162,6,0	0/0:14,0:14:42.14:0,42,1658	0/0:31,0:31:90.31:0,90,3697	0/0:19,0:19:57.20:0,57,2109	0/0:21,0:21:63.22:0,63,2566	1/1:1,16:17:44.84:1253,45,0	1/1:0,4:4:6.02:168,6,0	0/0:34,0:34:99:0,102,4202	0/0:33,0:33:99:0,99,3967	0/0:43,0:43:99:0,129,5332	0/0:22,0:22:66.23:0,66,2564
chr10	69496710	.	CTCTCCCT	C	4985.28	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=10.605;DP=627;FS=0.420;HRun=0;HaplotypeScore=164.2218;InbreedingCoeff=0.9904;MQ=67.11;MQ0=3;MQRankSum=-9.942;QD=38.65;ReadPosRankSum=-1.508;VQSLOD=4.4611;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,9:20:41.90:679,42,0	0/0:13,0:12:36.12:0,36,1168	0/0:35,0:24:10.29:0,10,1003	0/0:35,0:23:54.39:0,54,1201	1/1:3,24:27:45.10:1029,45,0	0/0:19,0:19:57.20:0,57,2004	0/0:32,0:32:87.71:0,88,2640	0/0:25,0:25:72.21:0,72,1874	0/0:14,0:14:42.13:0,42,1459	0/0:26,0:26:75.19:0,75,2339	0/0:15,0:15:45.11:0,45,1306	0/0:18,0:18:54.19:0,54,1916	0/0:20,0:20:57.16:0,57,1894	0/0:12,0:12:36.11:0,36,1273	0/0:32,0:32:96.28:0,96,3127	0/0:30,0:30:90.27:0,90,2896	1/1:13,11:24:63.06:1184,63,0	1/1:9,4:13:25.15:493,25,0	0/0:17,0:15:42.14:0,42,1529	0/0:31,0:31:90.27:0,90,2805	0/0:25,0:25:69.20:0,69,1995	0/0:20,0:20:57.16:0,57,1849	1/1:5,16:21:36.40:718,36,0	1/1:13,11:23:49.17:882,49,0	0/0:23,0:23:69.23:0,69,2504	0/0:20,0:19:54.16:0,54,1777	0/0:23,0:22:66.23:0,66,2309	0/0:12,0:10:30.09:0,30,881
chr10	69496725	.	C	CT	2786.21	PASS	AB=1.000;AC=22;AF=0.393;AN=56;BaseQRankSum=2.851;DP=652;FS=3.487;HRun=0;HaplotypeScore=115.5914;InbreedingCoeff=0.5456;MQ=67.94;MQ0=5;MQRankSum=-5.210;QD=8.24;ReadPosRankSum=-1.969;VQSLOD=3.0286;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,12:21:30.02:350,30,0	0/0:12,0:11:33.05:0,33,419	0/1:39,0:20:12.41:12,0,396	0/0:44,0:29:42.99:0,43,487	1/1:27,1:28:47.48:369,47,0	0/0:18,0:18:44.84:0,45,532	0/0:33,0:33:93.27:0,93,1233	1/1:26,0:26:12.42:157,12,0	0/0:15,0:15:39.11:0,39,512	0/0:23,0:23:51.02:0,51,616	0/0:21,0:21:53.82:0,54,651	0/0:18,0:18:51.61:0,52,663	0/0:22,0:22:51.10:0,51,611	0/0:12,0:12:33.07:0,33,394	0/0:27,0:27:80.95:0,81,957	0/0:23,0:23:57.13:0,57,715	1/1:13,13:26:53.91:541,54,0	1/1:8,6:14:12.91:281,13,0	0/1:18,0:16:14.52:66,0,15	0/1:27,0:27:12.86:13,0,51	0/1:35,0:35:19.45:152,0,19	0/0:20,0:20:54.12:0,54,698	1/1:17,5:22:44.91:440,45,0	1/1:12,13:24:44.98:482,45,0	0/0:26,0:26:63.17:0,63,813	1/1:22,0:21:2.16:108,2,0	0/1:26,0:25:3.55:4,0,69	0/1:9,0:8:12.63:13,0,30
chr10	69497656	.	T	TA	2796.41	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-11.614;DP=466;FS=4.338;HRun=6;HaplotypeScore=53.4434;InbreedingCoeff=0.9890;MQ=69.93;MQ0=0;MQRankSum=-0.881;QD=27.69;ReadPosRankSum=1.999;VQSLOD=4.2646;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,9:14:24.08:302,24,0	0/0:8,0:8:21.05:0,21,214	0/0:9,0:8:18.03:0,18,181	0/0:11,0:11:15.02:0,15,146	1/1:2,24:26:66.13:795,66,0	0/0:20,0:20:51.07:0,51,509	0/0:10,0:10:30.07:0,30,306	0/0:33,0:33:87.17:0,87,882	0/0:9,0:9:24.05:0,24,245	0/0:25,0:25:57.10:0,57,570	0/0:29,0:29:81.18:0,81,826	0/0:10,0:10:27.06:0,27,275	0/0:8,0:8:24.05:0,24,245	0/0:12,0:12:33.08:0,33,337	0/0:16,0:16:45.06:0,45,442	0/0:15,0:15:45.10:0,45,459	1/1:0,24:24:63.20:793,63,0	1/1:2,15:17:36.12:453,36,0	0/0:22,0:22:60.13:0,60,612	0/0:22,0:22:51.11:0,51,520	0/0:14,0:14:36.08:0,36,367	0/0:9,0:9:24.05:0,24,245	1/1:1,13:14:36.12:453,36,0	1/1:1,5:6:15.05:189,15,0	0/0:17,0:17:48.11:0,48,490	0/0:29,0:29:78.17:0,78,792	0/0:19,0:19:54.11:0,54,543	0/0:18,0:18:54.12:0,54,551
chr10	69497816	.	A	AAT	1628.90	PASS	AB=1.000;AC=14;AF=0.250;AN=56;BaseQRankSum=-1.939;DP=508;FS=8.289;HRun=0;HaplotypeScore=73.7370;InbreedingCoeff=0.7580;MQ=61.90;MQ0=26;MQRankSum=4.686;QD=11.01;ReadPosRankSum=-1.955;VQSLOD=1.7744;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:20.80:0,21,157	0/0:7,0:7:10.97:0,11,91	0/0:41,0:15:36.32:0,36,327	0/0:67,0:18:29.79:0,30,318	0/0:18,0:18:32.35:0,32,254	0/0:16,0:16:26.94:0,27,219	0/0:9,0:9:20.85:0,21,173	0/0:36,0:36:99:0,105,916	0/1:11,0:11:20.78:21,0,102	0/0:12,0:12:36.02:0,36,335	0/0:13,0:13:18.93:0,19,269	0/0:17,0:17:21.79:0,22,285	0/0:14,0:14:19.59:0,20,180	0/0:14,0:14:11.05:0,11,222	0/1:12,0:12:10.95:11,0,165	0/0:9,0:8:20.98:0,21,175	0/0:11,0:11:29.60:0,30,211	0/0:10,0:10:29.88:0,30,234	1/1:3,18:21:46.86:464,47,0	1/1:4,26:30:7.02:110,7,0	1/1:18,0:18:42.43:423,42,0	0/0:18,0:18:41.94:0,42,345	0/0:10,0:10:26.97:0,27,224	0/0:13,0:13:26.95:0,27,220	0/0:12,0:12:16.99:0,17,255	1/1:5,15:18:44.92:397,45,0	1/1:2,18:20:6.02:96,6,0	1/1:16,0:13:35.93:292,36,0
chr10	69497817	.	A	ATC	604.63	PASS	AB=0.900;AC=32;AF=0.727;AN=44;BaseQRankSum=-1.385;DP=550;FS=6.207;HRun=0;HaplotypeScore=89.0223;InbreedingCoeff=0.1942;MQ=60.48;MQ0=27;MQRankSum=1.864;QD=1.72;ReadPosRankSum=-0.735;VQSLOD=1.2317;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:16,0:16:0.03:0,0,0	1/1:8,0:9:3:26,3,0	./.	./.	0/1:21,0:21:0:0,0,0	1/1:22,0:22:0.37:1,0,0	0/1:12,0:12:0:0,0,0	1/1:40,0:40:4.21:23,4,0	1/1:9,3:12:5.70:87,6,0	1/1:15,0:15:0.47:1,0,0	1/1:16,0:16:3.01:44,3,0	1/1:16,3:19:3.01:44,3,0	0/1:9,0:15:17.25:17,0,43	1/1:11,3:14:3.01:44,3,0	0/1:7,6:13:22.86:79,0,23	./.	0/0:11,0:12:6.38:0,6,27	0/0:10,0:11:5.44:0,5,24	1/1:19,0:19:8.97:77,9,0	0/1:32,0:32:23.66:31,0,24	1/1:19,0:19:11.81:110,12,0	./.	0/0:8,0:10:2.84:0,3,14	./.	1/1:13,2:16:3.01:44,3,0	1/1:22,0:20:4.36:32,4,0	1/1:18,0:19:6.90:61,7,0	./.
chr10	69500947	.	TA	T	1863.97	PASS	AB=0.926;AC=15;AF=0.268;AN=56;BaseQRankSum=7.930;DP=596;FS=7.405;HRun=12;HaplotypeScore=77.6094;InbreedingCoeff=0.7110;MQ=71.78;MQ0=0;MQRankSum=0.245;QD=10.02;ReadPosRankSum=3.139;VQSLOD=2.9347;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:25:54.71:0,55,298	0/0:10,0:10:17.71:0,18,163	0/0:21,1:18:3.67:0,4,236	0/1:20,0:16:28.72:29,0,37	0/0:21,0:39:80.22:0,80,448	0/0:15,0:15:42.08:0,42,426	0/0:11,0:11:30.06:0,30,305	0/0:25,2:27:25.42:0,25,484	0/1:29,4:34:6.05:6,0,620	0/0:26,0:28:65.91:0,66,632	0/0:21,1:23:33.70:0,34,502	0/0:14,1:16:18.67:0,19,350	0/0:24,0:25:65.94:0,66,639	0/1:12,1:13:16.29:16,0,207	0/0:20,0:21:40.16:0,40,383	0/0:20,1:22:24.67:0,25,410	0/0:23,1:23:36.87:0,37,547	0/0:19,0:19:51.08:0,51,510	1/1:4,17:21:50.74:389,51,0	1/1:7,21:28:26.25:381,26,0	1/1:1,6:7:17.93:139,18,0	0/0:17,2:19:13.88:0,14,355	0/0:23,0:24:60.05:0,60,591	0/0:14,0:14:30.03:0,30,292	0/0:25,1:26:45.84:0,46,620	1/1:2,14:16:41.76:316,42,0	1/1:5,30:37:84.73:639,85,0	1/1:3,6:9:17.92:139,18,0
chr10	69501010	.	G	GA	3616.08	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-10.154;DP=610;FS=9.324;HRun=9;HaplotypeScore=67.4684;InbreedingCoeff=0.9661;MQ=77.77;MQ0=0;MQRankSum=-1.751;QD=23.03;ReadPosRankSum=1.012;VQSLOD=4.3307;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,29:38:12.07:810,12,0	0/0:13,0:13:38.99:0,39,338	0/0:16,0:17:5.71:0,6,238	0/0:14,0:13:17.69:0,18,197	1/1:9,29:38:46.10:724,46,0	0/0:23,0:23:62.97:0,63,546	0/0:17,0:17:50.99:0,51,443	0/0:31,0:31:65.95:0,66,572	0/0:28,0:28:77.97:0,78,677	0/0:19,0:19:15.69:0,16,308	0/0:21,0:21:56.97:0,57,491	0/0:17,0:17:47.99:0,48,417	0/0:21,0:21:50.95:0,51,434	0/0:21,1:22:32.81:0,33,514	0/0:22,0:22:50.97:0,51,443	0/0:25,0:25:71.98:0,72,625	1/1:4,21:25:48.13:531,48,0	1/1:1,16:17:45.12:498,45,0	0/0:27,0:27:59.96:0,60,516	0/0:25,0:25:68.98:0,69,599	0/0:7,0:7:20.98:0,21,179	0/0:21,0:21:56.98:0,57,495	1/1:4,21:26:43.58:656,44,0	1/1:0,13:13:36.10:398,36,0	0/0:18,0:18:46.22:0,46,394	0/0:26,1:27:32.80:0,33,514	0/0:27,0:27:68.97:0,69,599	0/0:11,0:11:29.99:0,30,260
chr10	69501776	.	T	TA	1820.42	PASS	AB=0.939;AC=17;AF=0.304;AN=56;BaseQRankSum=-2.062;DP=604;FS=0.883;HRun=13;HaplotypeScore=91.2291;InbreedingCoeff=0.5134;MQ=69.72;MQ0=2;MQRankSum=1.473;QD=7.81;ReadPosRankSum=-3.325;VQSLOD=2.1583;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:4,0:35:50.88:0,51,147	0/0:4,0:4:8.91:0,9,62	0/1:21,0:8:9.71:23,0,10	0/1:19,0:17:27.28:27,0,58	0/0:7,0:29:38.64:0,39,112	0/0:24,1:26:32.60:0,33,378	0/0:17,1:19:0.29:0,0,227	0/0:28,0:31:39.47:0,39,257	0/0:14,0:14:29.74:0,30,206	0/0:17,0:17:17.72:0,18,122	0/1:19,3:22:14.18:14,0,200	0/0:16,0:18:33.23:0,33,214	0/0:23,1:25:21.66:0,22,284	0/0:26,0:26:55.41:0,55,367	0/0:24,2:29:15.89:0,16,373	0/1:19,2:21:8.07:8,0,240	0/0:1,0:17:30.55:0,31,90	0/0:4,0:20:30.53:0,31,90	1/1:8,12:21:38.85:339,39,0	1/1:9,12:23:5.57:220,6,0	1/1:6,12:18:6.45:202,6,0	0/0:21,0:25:47.63:0,48,305	0/0:3,0:24:36.23:0,36,107	0/0:0,0:12:20.37:0,20,60	0/1:13,2:18:17.01:17,0,160	1/1:9,18:29:36.06:426,36,0	1/1:3,25:30:48.17:564,48,0	1/1:3,7:10:17.04:165,17,0
chr10	69502151	.	G	GCACCCA	21707.91	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=0.471;DP=602;FS=2.747;HRun=0;HaplotypeScore=129.6743;InbreedingCoeff=0.9973;MQ=84.01;MQ0=0;MQRankSum=-18.509;QD=83.17;ReadPosRankSum=-2.813;VQSLOD=5.5405;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,32:47:99:3465,105,0	0/0:7,0:7:21.07:0,21,496	0/0:26,0:26:69.24:0,69,1541	0/0:21,0:21:54.15:0,54,1141	1/1:3,8:13:24.08:827,24,0	0/0:15,0:15:42.14:0,42,991	0/0:26,0:26:72.25:0,72,1682	1/1:14,19:36:99:3289,99,0	0/0:30,0:30:84.29:0,84,1984	0/0:23,0:23:57.19:0,57,1261	0/0:9,0:9:27.09:0,27,638	0/0:36,0:36:99:0,105,2482	0/0:27,0:27:75.24:0,75,1725	0/0:25,0:25:72.25:0,72,1672	0/0:27,0:27:78.27:0,78,1825	0/0:31,0:30:87.30:0,87,1982	1/1:5,10:15:42.14:1442,42,0	1/1:5,7:12:33.11:1157,33,0	1/1:13,8:22:60.21:2020,60,0	1/1:3,17:22:51.13:1659,51,0	1/1:9,4:13:21.07:705,21,0	0/0:16,0:16:45.15:0,45,1043	1/1:3,11:14:33.11:1169,33,0	1/1:6,14:20:47.27:1635,47,0	0/0:22,0:22:66.23:0,66,1560	1/1:3,19:22:66.23:2311,66,0	1/1:11,7:19:42.14:1392,42,0	1/1:3,3:6:18.06:637,18,0
chr10	69502354	.	T	TTGTGTGTGTG	9716.98	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=11.946;DP=767;FS=2.355;HRun=0;HaplotypeScore=259.0648;InbreedingCoeff=0.9486;MQ=58.16;MQ0=3;MQRankSum=-12.504;QD=31.04;ReadPosRankSum=-3.838;VQSLOD=3.3835;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:31,0:33:15.04:356,15,0	0/0:16,0:16:33.84:0,34,1084	0/0:30,0:14:20.85:0,21,349	0/0:34,0:22:32.05:0,32,461	1/1:14,1:45:45.01:1245,45,0	0/0:31,0:31:81.25:0,81,2115	0/0:22,0:23:51.16:0,51,1295	1/1:46,0:46:75.23:1922,75,0	0/0:29,0:29:60.20:0,60,1760	0/0:39,0:39:63.69:0,64,2012	0/0:24,0:24:63.19:0,63,1744	0/0:37,0:38:60.30:0,60,2321	0/0:31,0:32:90.28:0,90,2510	0/0:32,0:32:75.21:0,75,2008	0/0:32,0:32:81.28:0,81,2254	0/0:22,0:22:50.13:0,50,1397	1/1:9,11:23:21.07:946,21,0	1/1:12,9:22:15.05:532,15,0	1/1:17,0:16:22.31:406,22,0	1/1:23,0:23:17.78:338,18,0	0/0:17,0:17:5.98:0,6,83	0/0:26,0:26:63.20:0,63,1792	1/1:14,15:30:36.12:1666,36,0	1/1:8,7:17:6.02:239,6,0	0/0:29,0:29:66.18:0,66,1645	1/1:36,0:35:46.02:1042,46,0	1/1:16,0:18:34.26:979,34,0	1/1:3,0:3:5.99:48,6,0
chr10	69502492	.	G	GTCTGTGTGTGCGTGTA	1140.53	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=1.261;DP=945;FS=10.056;HRun=0;HaplotypeScore=397.0217;InbreedingCoeff=0.9912;MQ=56.46;MQ0=8;MQRankSum=0.249;QD=19.66;ReadPosRankSum=-2.160;VQSLOD=0.3132;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:28,2:31:21.05:651,21,0	0/0:9,0:9:21.07:0,21,849	0/0:55,0:31:24.03:0,24,461	0/0:47,0:30:29.62:0,30,426	1/1:19,4:25:26.73:610,27,0	0/0:26,0:26:60.19:0,60,2142	0/0:33,0:33:63.16:0,63,1989	0/0:39,0:39:50.30:0,50,1090	0/0:30,0:30:69.22:0,69,2842	0/0:38,0:38:75.24:0,75,2600	0/0:19,0:19:45.09:0,45,1573	0/0:45,0:45:99:0,99,3262	0/0:46,0:46:99:0,99,3733	0/0:32,0:32:72.23:0,72,2470	0/0:37,0:37:87.28:0,87,3050	0/0:40,0:40:93.29:0,93,3337	0/0:29,0:29:60.17:0,60,2006	0/0:19,0:20:21.03:0,21,904	0/0:21,0:20:27.03:0,27,674	0/0:31,0:30:53.90:0,54,1865	0/0:69,0:69:99:0,150,5469	0/0:34,0:34:57.18:0,57,2036	0/0:30,0:30:63.01:0,63,2210	0/0:40,0:40:87.19:0,87,3107	0/0:26,0:26:60.21:0,60,2245	0/0:40,0:40:75.26:0,75,2782	0/0:38,0:38:75.15:0,75,2739	0/0:13,0:13:36.09:0,36,1104
chr10	69502533	.	G	GGT	5682.31	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-6.552;DP=893;FS=0.365;HRun=0;HaplotypeScore=129.3504;InbreedingCoeff=0.9715;MQ=63.52;MQ0=3;MQRankSum=-0.270;QD=30.23;ReadPosRankSum=1.451;VQSLOD=6.5982;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,30:38:70.47:1084,70,0	0/0:5,0:5:12.04:0,12,156	0/0:23,0:11:6.02:0,6,76	0/0:21,0:15:19.29:0,19,222	1/1:6,24:31:48.16:815,48,0	0/0:26,0:26:66.14:0,66,798	0/0:35,0:35:93.29:0,93,1195	0/0:30,0:30:75.24:0,75,975	0/0:36,0:36:93.04:0,93,1209	0/0:35,0:35:90.26:0,90,1141	0/0:23,0:23:54.16:0,54,689	0/0:46,0:46:99:0,132,1697	0/0:36,0:36:90.29:0,90,1169	0/0:40,0:40:99:0,117,1521	0/0:59,0:59:99:0,166,2132	0/0:38,0:38:99:0,105,1366	1/1:7,20:26:50.73:834,51,0	1/1:7,14:21:25.90:413,26,0	0/0:27,0:26:66.16:0,66,810	0/0:23,0:23:54.15:0,54,675	0/0:61,0:61:99:0,159,2018	0/0:33,0:33:93.29:0,93,1196	1/1:9,27:36:75.26:1261,75,0	1/1:4,30:33:75.26:1276,75,0	0/0:25,0:25:72.23:0,72,936	0/0:35,0:35:84.22:0,84,1061	0/0:33,0:33:90.23:0,90,1135	0/0:14,0:14:39.13:0,39,507
chr10	69503159	.	AACACAC	A	78.93	PASS	AB=1.000;AC=9;AF=0.205;AN=44;BaseQRankSum=5.235;DP=514;FS=2.331;HRun=0;HaplotypeScore=131.7280;InbreedingCoeff=0.4996;MQ=62.42;MQ0=9;MQRankSum=-2.338;QD=0.66;ReadPosRankSum=-1.555;VQSLOD=2.4229;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:10,9:17:8.84:56,9,0	0/0:10,0:11:21.67:0,22,412	0/0:22,0:17:3:0,3,27	0/0:25,0:19:10.25:0,10,84	1/1:16,11:28:14.40:98,14,0	0/0:25,0:25:56.47:0,56,1002	0/0:32,0:35:54.15:0,54,1194	0/0:31,0:30:8.86:0,9,77	0/0:22,0:22:26.78:0,27,612	0/0:19,0:19:35.59:0,36,810	0/0:16,0:18:17.81:0,18,437	0/0:15,0:16:20.88:0,21,369	0/0:16,0:16:27.09:0,27,565	0/0:12,0:12:24.01:0,24,456	0/0:19,0:20:26.85:0,27,503	0/0:18,0:18:30.08:0,30,673	0/1:23,0:22:29.10:33,0,29	0/1:5,0:5:2.64:3,0,38	./.	./.	./.	0/0:22,0:24:50.64:0,51,1032	1/1:22,0:22:2.13:5,2,0	0/1:22,0:22:6.70:8,0,7	0/0:20,0:20:39.06:0,39,835	./.	./.	./.
chr10	69503189	.	CACAA	C	496.58	PASS	AB=0.902;AC=12;AF=0.273;AN=44;BaseQRankSum=6.298;DP=448;FS=1.190;HRun=0;HaplotypeScore=101.1795;InbreedingCoeff=0.3891;MQ=47.89;MQ0=40;MQRankSum=-4.433;QD=3.16;ReadPosRankSum=-4.909;VQSLOD=0.6120;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:17:19.98:0,20,103	0/0:14,0:14:10.03:0,10,306	1/1:24,0:2:2.04:6,2,0	0/1:29,0:5:1.89:2,0,24	0/0:19,0:19:2.07:0,2,9	0/0:27,0:27:48.62:0,49,842	0/0:36,0:36:46.15:0,46,1055	1/1:33,0:32:2.33:333,2,0	0/1:18,0:17:2.63:3,0,423	0/0:20,0:19:34.05:0,34,770	0/0:20,0:18:8.19:0,8,407	0/0:19,0:18:1.18:0,1,395	0/0:14,0:13:32.86:0,33,437	0/0:10,0:10:10.17:0,10,286	0/0:17,0:17:33.14:0,33,480	0/0:17,0:16:40.31:0,40,545	0/1:6,11:16:17.26:80,0,17	0/1:3,0:3:11.03:14,0,11	./.	./.	./.	0/0:26,0:26:35.62:0,36,865	1/1:2,15:17:9.80:101,10,0	1/1:5,11:16:8.57:87,9,0	0/0:24,0:24:54.41:0,54,757	./.	./.	./.
chr10	69503214	.	G	GGC	258.50	PASS	AC=8;AF=0.160;AN=50;BaseQRankSum=4.930;DP=464;FS=9.790;HRun=0;HaplotypeScore=89.9575;InbreedingCoeff=0.7976;MQ=52.61;MQ0=33;MQRankSum=-5.569;QD=7.83;ReadPosRankSum=-1.660;VQSLOD=2.2395;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:8,1:8:13.58:143,14,0	0/0:11,0:11:27:0,27,349	0/0:32,0:6:17.54:0,18,189	0/0:41,0:16:36.70:0,37,458	0/0:14,2:16:0:0,0,0	0/0:29,0:29:82.36:0,82,1110	0/0:27,0:27:67.41:0,67,927	0/0:20,0:19:47.15:0,47,278	0/0:23,0:22:57.07:0,57,729	0/0:20,0:20:45.49:0,45,552	0/0:20,0:20:44.83:0,45,629	0/0:31,0:30:75.13:0,75,937	0/0:12,0:11:30.04:0,30,370	0/0:12,0:12:33.06:0,33,474	0/0:26,0:26:72.09:0,72,949	0/0:21,0:20:60.07:0,60,793	1/1:3,2:4:9.03:111,9,0	./.	0/0:10,0:9:12.67:0,13,73	./.	./.	0/0:26,0:26:66.20:0,66,958	1/1:7,2:9:6.82:38,7,0	1/1:7,3:10:7.53:103,8,0	0/0:24,0:24:60.16:0,60,816	0/0:8,0:8:4.52:0,5,24	0/0:6,0:6:6.75:0,7,35	0/0:6,0:5:5.91:0,6,39
chr10	69503220	.	G	GA	529.61	PASS	AB=1.000;AC=11;AF=0.212;AN=52;BaseQRankSum=5.635;DP=503;FS=16.958;HRun=0;HaplotypeScore=110.4733;InbreedingCoeff=0.5723;MQ=57.21;MQ0=18;MQRankSum=-6.566;QD=5.19;ReadPosRankSum=-2.133;VQSLOD=1.5768;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:13,0:12:14.78:36,0,15	0/0:7,0:10:23.88:0,24,264	0/0:30,0:11:20.27:0,20,217	0/0:42,0:21:49.41:0,49,562	0/1:23,0:23:0:1,0,0	0/0:28,0:29:76.36:0,76,940	0/0:26,0:26:73.29:0,73,849	1/1:13,14:25:61.74:564,62,0	0/0:20,0:19:50.95:0,51,608	0/0:22,0:22:48.06:0,48,635	0/0:20,0:20:54.06:0,54,632	0/0:30,0:30:84.02:0,84,932	0/0:13,0:12:33.04:0,33,370	0/0:12,0:12:35.77:0,36,447	0/0:29,0:30:78.95:0,79,889	0/0:21,0:20:57.05:0,57,698	1/1:9,0:8:1.82:19,2,0	1/1:2,0:2:2.94:18,3,0	0/0:8,0:8:0.49:0,0,58	./.	./.	0/0:27,0:27:72.15:0,72,884	1/1:22,0:22:1.56:22,2,0	0/0:16,0:16:11.04:0,11,41	0/0:25,0:25:69.14:0,69,793	0/1:6,0:6:0.06:0,0,0	0/0:6,0:6:10.39:0,10,58	0/0:5,0:4:5.92:0,6,38
chr10	69503280	.	T	TA	3077.07	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=9.030;DP=597;FS=0.852;HRun=8;HaplotypeScore=82.8942;InbreedingCoeff=0.9993;MQ=85.63;MQ0=0;MQRankSum=-3.284;QD=26.53;ReadPosRankSum=-2.409;VQSLOD=3.2339;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:18:50.06:0,50,445	0/0:13,0:13:36.02:0,36,330	0/0:23,0:23:53.98:0,54,480	0/0:24,0:24:46.29:0,46,401	0/0:18,0:18:45.02:0,45,410	0/0:28,0:28:71.99:0,72,649	0/0:29,0:29:81:0,81,730	0/0:40,0:40:83.98:0,84,760	0/0:22,0:22:63:0,63,567	0/0:20,0:20:60.02:0,60,545	0/0:13,0:13:30.01:0,30,275	0/0:24,0:24:51.47:0,51,468	0/0:20,0:20:51.01:0,51,466	0/0:17,0:17:44.62:0,45,393	0/0:40,0:40:99:0,108,984	0/0:28,0:27:55.22:0,55,638	0/0:13,0:13:39.02:0,39,357	0/0:10,0:10:27.01:0,27,247	1/1:5,22:27:66.16:739,66,0	1/1:2,17:19:45.13:519,45,0	1/1:1,9:10:27.04:292,27,0	0/0:23,0:23:69.03:0,69,628	0/0:26,0:26:59.99:0,60,544	0/0:19,0:19:48.02:0,48,438	0/0:13,0:13:30.01:0,30,274	1/1:4,17:21:48.14:554,48,0	1/1:5,19:23:60.13:676,60,0	1/1:0,15:15:42.12:485,42,0
chr10	69506061	.	AAAAAAG	A	697.08	PASS	AB=1.000;AC=4;AF=0.071;AN=56;BaseQRankSum=-0.404;DP=479;FS=0.779;HRun=0;HaplotypeScore=114.8453;InbreedingCoeff=0.4489;MQ=62.03;MQ0=5;MQRankSum=-1.657;QD=11.43;ReadPosRankSum=-3.836;VQSLOD=1.2320;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:23:42.14:0,42,1077	0/0:12,0:12:36.09:0,36,942	0/0:12,0:10:25.02:0,25,541	0/0:16,0:11:30.35:0,30,626	0/0:20,0:20:39.01:0,39,961	0/0:16,0:15:33.07:0,33,913	0/0:12,0:12:30.10:0,30,890	1/1:4,15:19:50.99:767,51,0	0/0:8,0:8:24.06:0,24,402	0/0:18,0:18:43.01:0,43,972	0/0:27,0:27:72.19:0,72,2006	0/0:15,0:14:36.58:0,37,874	0/0:19,0:19:51.11:0,51,1084	0/0:14,0:14:38.14:0,38,1021	0/0:17,0:17:47.99:0,48,910	0/0:9,0:8:24.07:0,24,628	0/0:22,0:21:42.14:0,42,1027	0/0:21,0:21:36:0,36,927	0/1:17,0:16:34.16:34,0,96	0/1:25,0:25:6.76:7,0,174	0/0:6,0:5:6.91:0,7,46	0/0:14,0:14:39.05:0,39,902	0/0:22,0:22:38.76:0,39,895	0/0:9,0:9:15.05:0,15,386	0/0:17,0:17:41.10:0,41,1120	0/0:28,0:26:13.42:0,13,430	0/0:28,0:28:29.40:0,29,219	0/0:12,0:12:23.69:0,24,188
chr10	69506062	.	A	AAG	2988.75	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-9.265;DP=492;FS=1.581;HRun=0;HaplotypeScore=78.1282;InbreedingCoeff=0.9597;MQ=62.43;MQ0=5;MQRankSum=0.531;QD=24.70;ReadPosRankSum=6.703;VQSLOD=4.0041;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,17:22:41.69:600,42,0	0/0:12,0:12:35.89:0,36,406	0/0:12,0:10:23.84:0,24,218	0/0:17,0:12:27.30:0,27,237	1/1:1,20:23:41.69:532,42,0	0/0:16,0:15:41.93:0,42,435	0/0:12,0:12:33.04:0,33,393	0/0:18,0:19:41.67:0,42,293	0/0:8,0:8:22.60:0,23,249	0/0:20,0:20:53.83:0,54,561	0/0:29,0:29:71.82:0,72,853	0/0:15,0:14:35.91:0,36,433	0/0:19,0:19:54.01:0,54,583	0/0:14,0:14:38.84:0,39,470	0/0:18,0:18:47.95:0,48,497	0/0:9,0:8:23.89:0,24,262	1/1:4,18:21:33.10:623,33,0	1/1:2,18:21:39.06:598,39,0	0/0:17,0:16:20.71:0,21,293	0/0:25,0:25:37.40:0,37,345	0/0:6,0:5:7.38:0,7,77	0/0:16,0:16:39.04:0,39,449	1/1:0,22:23:35.93:578,36,0	1/1:1,8:9:15.02:243,15,0	0/0:17,0:17:47.58:0,48,530	0/0:29,0:27:54.64:0,55,617	0/0:29,0:29:24.12:0,24,303	0/0:12,0:12:6.82:0,7,213
chr10	69506064	.	AAAG	A	1789.28	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=7.220;DP=495;FS=21.129;HRun=0;HaplotypeScore=88.6016;InbreedingCoeff=0.9735;MQ=62.70;MQ0=5;MQRankSum=-3.697;QD=13.06;ReadPosRankSum=-3.089;VQSLOD=0.9935;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,1:21:42.14:0,42,675	0/0:12,0:12:36.07:0,36,546	0/0:12,0:10:25.01:0,25,324	0/0:17,0:12:32.59:0,33,431	0/0:23,0:23:50.93:0,51,664	0/0:17,0:16:32.31:0,32,527	0/0:12,0:12:33.06:0,33,546	1/1:18,0:18:39.14:397,39,0	0/0:8,0:8:20.97:0,21,248	0/0:22,0:22:53.96:0,54,726	0/0:29,0:29:75.01:0,75,1242	0/0:16,0:15:39.01:0,39,547	0/0:20,0:20:54.01:0,54,714	0/0:13,0:13:31.93:0,32,608	0/0:19,0:19:50.93:0,51,620	0/0:9,0:8:24.07:0,24,380	0/0:23,0:22:31.65:0,32,609	0/0:21,0:21:39.11:0,39,606	1/1:16,1:16:16.18:308,16,0	1/1:23,2:25:45.39:351,45,0	1/1:6,0:5:6.90:45,7,0	0/0:16,0:16:44.91:0,45,624	0/0:21,0:21:31.46:0,31,571	0/0:9,0:9:15.03:0,15,245	0/0:17,0:17:38.59:0,39,666	1/1:27,3:28:16.83:529,17,0	1/1:28,1:29:31.08:219,31,0	1/1:11,1:12:19.34:135,19,0
chr10	69506065	.	AAG	A	2203.75	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=5.584;DP=494;FS=16.139;HRun=0;HaplotypeScore=78.9300;InbreedingCoeff=0.9684;MQ=62.90;MQ0=5;MQRankSum=-3.492;QD=16.45;ReadPosRankSum=-3.251;VQSLOD=1.3530;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:23:29.38:0,29,516	0/0:12,0:12:35.84:0,36,427	0/0:12,0:10:24.98:0,25,275	0/0:17,0:12:31.43:0,31,348	0/0:24,0:24:53.85:0,54,544	0/0:16,0:15:25.83:0,26,405	0/0:12,0:12:33:0,33,431	1/1:17,0:17:38.66:339,39,0	0/0:8,0:8:20.90:0,21,217	0/0:22,0:22:38.06:0,38,602	0/0:28,0:29:74.87:0,75,1004	0/0:17,0:16:41.95:0,42,479	0/0:20,0:20:53.84:0,54,605	0/0:13,0:13:24.45:0,24,481	0/0:19,0:19:50.75:0,51,533	0/0:9,0:8:24.06:0,24,303	0/0:23,0:22:43.92:0,44,498	0/0:20,0:20:39.07:0,39,459	1/1:17,0:16:9.09:288,9,0	1/1:3,22:25:47.85:450,48,0	1/1:4,2:5:7.38:81,7,0	0/0:16,0:16:44.25:0,44,508	0/0:21,0:21:41.81:0,42,460	0/0:9,0:9:15.02:0,15,183	0/0:17,0:17:35.89:0,36,517	1/1:7,22:28:35.16:683,35,0	1/1:3,25:28:31.03:332,31,0	1/1:5,7:12:20.97:223,21,0
chr10	69506066	.	AG	A	1753.06	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=7.450;DP=492;FS=15.830;HRun=1;HaplotypeScore=73.2222;InbreedingCoeff=0.9399;MQ=64.24;MQ0=5;MQRankSum=-3.537;QD=13.38;ReadPosRankSum=-3.548;VQSLOD=0.7045;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:24:29.13:0,29,351	0/0:12,0:12:33.34:0,33,316	0/0:13,0:11:24.19:0,24,218	0/0:17,0:12:26.61:0,27,275	0/0:24,0:24:53.68:0,54,413	0/0:15,0:14:32.56:0,33,320	0/0:13,0:13:35.96:0,36,365	1/1:17,0:17:48.25:298,48,0	0/0:8,0:8:20.83:0,21,182	0/0:21,0:21:37.75:0,38,504	0/0:29,0:29:74.44:0,74,767	0/0:18,0:17:44.93:0,45,427	0/0:19,0:19:51.73:0,52,465	0/0:14,0:14:21.72:0,22,387	0/0:17,0:17:49.15:0,49,444	0/0:9,0:8:23.69:0,24,217	0/0:22,0:21:44.77:0,45,359	0/0:18,0:18:38.85:0,39,316	1/1:16,1:16:0.81:289,1,0	1/1:24,0:24:47.63:339,48,0	1/1:7,0:6:9.86:72,10,0	0/0:17,0:17:47.17:0,47,444	0/0:22,0:22:39.67:0,40,317	0/0:9,0:9:14.93:0,15,124	0/0:19,0:19:34.81:0,35,431	1/1:26,2:27:45.56:549,46,0	1/1:26,2:28:29.76:209,30,0	1/1:8,2:10:20.82:186,21,0
chr10	69506774	.	T	TG	1967.35	PASS	AB=0.605;AC=13;AF=0.232;AN=56;BaseQRankSum=-2.319;DP=662;FS=8.686;HRun=9;HaplotypeScore=127.2704;InbreedingCoeff=0.8639;MQ=79.24;MQ0=1;MQRankSum=-1.404;QD=11.05;ReadPosRankSum=-2.531;VQSLOD=1.4074;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:10,23:33:60.16:660,60,0	0/0:4,0:4:12:0,12,104	0/0:41,0:29:27.59:0,28,193	0/0:38,1:30:18.44:0,18,245	1/1:5,19:24:7.19:490,7,0	0/0:19,0:19:44.98:0,45,391	0/0:18,0:18:38.95:0,39,334	0/1:9,17:26:19.97:434,0,20	0/0:15,0:16:47.03:0,47,397	0/0:22,0:22:47.96:0,48,412	0/0:20,0:20:56.98:0,57,495	0/0:29,0:29:77.95:0,78,671	0/0:18,0:18:47.96:0,48,413	0/0:22,0:22:59.95:0,60,515	0/0:29,0:29:77.92:0,78,667	0/0:18,0:18:41.99:0,42,365	1/1:20,1:34:33.71:173,34,0	1/1:7,1:26:42.88:235,43,0	0/0:23,0:23:36.84:0,37,110	0/0:29,0:29:48.26:0,48,139	0/0:13,0:13:14.25:0,14,42	0/0:35,0:35:98.85:0,99,847	1/1:7,1:20:11.36:58,11,0	1/1:6,0:15:19.99:101,20,0	0/0:26,0:26:65.95:0,66,565	0/0:22,0:22:34.62:0,35,101	0/0:25,0:25:38.70:0,39,113	0/0:12,0:12:20.37:0,20,59
chr10	69506782	.	GGT	G	4322.82	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=10.556;DP=621;FS=0.000;HRun=0;HaplotypeScore=111.7663;InbreedingCoeff=0.9847;MQ=78.01;MQ0=1;MQRankSum=-0.854;QD=35.14;ReadPosRankSum=2.244;VQSLOD=7.1409;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:78.13:0,78,863	0/0:4,0:4:12.04:0,12,228	0/0:39,0:25:41.91:0,42,664	0/0:38,0:31:15.97:0,16,707	0/0:25,0:25:74.94:0,75,829	0/0:20,0:20:60.12:0,60,995	0/0:17,0:17:51.12:0,51,838	0/0:24,0:24:72.20:0,72,921	0/0:16,0:16:48.03:0,48,864	0/0:19,0:19:54.17:0,54,942	0/0:21,0:21:63.21:0,63,1136	0/0:28,0:28:84.26:0,84,1514	0/0:18,0:18:54.15:0,54,949	0/0:21,0:21:60.21:0,60,1134	0/0:30,0:30:90.27:0,90,1605	0/0:18,0:18:54.15:0,54,916	0/0:24,0:24:45.55:0,46,514	0/0:20,0:20:48.14:0,48,565	1/1:1,21:22:66.12:847,66,0	1/1:0,31:31:84.11:1149,84,0	1/1:0,11:11:21.07:307,21,0	0/0:35,0:35:99:0,102,1873	0/0:13,0:13:12.69:0,13,162	0/0:13,0:13:27.04:0,27,315	0/0:23,0:23:69.24:0,69,1277	1/1:3,18:21:56.46:758,56,0	1/1:0,27:27:57.19:824,57,0	1/1:0,11:11:30.10:438,30,0
chr10	69507128	.	G	GA	3781.65	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-9.580;DP=654;FS=10.082;HRun=8;HaplotypeScore=62.9787;InbreedingCoeff=0.9585;MQ=78.23;MQ0=0;MQRankSum=-0.647;QD=27.60;ReadPosRankSum=-0.646;VQSLOD=3.5464;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,102,928	0/0:3,0:3:6:0,6,55	0/0:18,1:19:11.99:0,12,171	0/0:10,0:10:9.70:0,10,146	0/0:25,0:26:60.44:0,60,644	0/0:20,0:20:35.45:0,35,497	0/0:26,0:26:69.02:0,69,625	0/0:44,0:44:99:0,108,981	0/0:22,0:22:60.03:0,60,549	0/0:27,0:27:72.04:0,72,659	0/0:20,0:20:48.01:0,48,439	0/0:20,0:20:57.01:0,57,516	0/0:22,0:22:57.02:0,57,522	0/0:34,0:34:90.01:0,90,818	0/0:24,0:24:66.04:0,66,604	0/0:20,0:20:51.01:0,51,467	0/0:36,0:36:90.04:0,90,824	0/0:21,0:21:59.97:0,60,535	1/1:3,23:26:69.16:763,69,0	1/1:2,25:27:75.18:847,75,0	1/1:8,11:19:14.60:400,15,0	0/0:23,0:23:65.99:0,66,590	0/0:18,0:18:48.02:0,48,439	0/0:23,0:24:68.05:0,68,605	0/0:20,0:20:60.03:0,60,549	1/1:7,22:30:44.58:747,45,0	1/1:5,23:28:69.17:782,69,0	1/1:0,7:7:21.06:242,21,0
chr10	69507758	.	CA	C	1055.13	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=8.554;DP=784;FS=2.121;HRun=6;HaplotypeScore=72.8487;InbreedingCoeff=0.9971;MQ=74.74;MQ0=0;MQRankSum=0.865;QD=27.77;ReadPosRankSum=-4.617;VQSLOD=1.9806;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:96.29:0,96,1234	0/0:17,0:17:48.16:0,48,631	0/0:13,0:13:23.26:0,23,334	0/0:14,0:14:36.11:0,36,445	0/0:28,0:28:75.23:0,75,974	0/0:36,0:36:90.28:0,90,1170	0/0:19,0:19:45.14:0,45,581	1/1:2,36:38:99:1150,108,0	0/0:14,0:14:42.14:0,42,552	0/0:32,0:32:87.27:0,87,1120	0/0:22,0:22:60.16:0,60,748	0/0:20,0:20:60.20:0,60,790	0/0:26,0:26:75.23:0,75,963	0/0:40,0:40:99:0,114,1500	0/0:37,0:37:99:0,99,1271	0/0:34,0:34:99:0,99,1284	0/0:21,0:21:60.18:0,60,773	0/0:24,0:23:69.16:0,69,870	0/0:24,0:24:72.23:0,72,947	0/0:40,0:40:99:0,117,1524	0/0:28,0:28:72.23:0,72,942	0/0:33,0:33:90.29:0,90,1179	0/0:31,0:31:84.27:0,84,1104	0/0:39,0:39:99:0,108,1421	0/0:37,0:37:99:0,108,1421	0/0:35,0:35:96.29:0,96,1237	0/0:37,0:37:99:0,105,1365	0/0:12,0:12:33.11:0,33,434
chr10	69508008	.	T	TAC	1316.65	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=4.189;DP=707;FS=3.806;HRun=0;HaplotypeScore=91.0441;InbreedingCoeff=0.9987;MQ=56.62;MQ0=8;MQRankSum=-8.445;QD=45.40;ReadPosRankSum=-4.533;VQSLOD=3.2276;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:38,1:39:44.63:0,45,1433	0/0:15,0:15:45.14:0,45,668	0/0:17,0:11:29.68:0,30,397	0/0:16,0:10:30.10:0,30,446	0/0:30,0:29:66.21:0,66,990	0/0:23,0:23:69.22:0,69,1031	0/0:20,0:20:60.20:0,60,908	1/1:10,19:29:78.27:1412,78,0	0/0:18,0:18:51.13:0,51,711	0/0:29,0:29:87.30:0,87,1332	0/0:23,0:22:63.20:0,63,941	0/0:34,0:34:99:0,99,1516	0/0:32,0:32:96.31:0,96,1448	0/0:15,0:15:45.14:0,45,668	0/0:21,0:21:57.19:0,57,871	0/0:28,0:28:84.29:0,84,1285	0/0:26,0:25:75.24:0,75,1121	0/0:23,0:22:60.19:0,60,885	0/0:21,0:20:48.16:0,48,735	0/0:27,0:27:72.24:0,72,1103	0/0:29,0:29:72.24:0,72,1098	0/0:22,0:22:63.19:0,63,923	0/0:26,0:26:75.25:0,75,1146	0/0:36,0:36:99:0,105,1582	0/0:26,0:26:75.23:0,75,1100	0/0:35,0:35:99:0,105,1603	0/0:33,0:32:84.29:0,84,1286	0/0:14,0:13:36.09:0,36,507
chr10	69510082	.	AAG	A	63.27	PASS	AB=0.918;AC=13;AF=0.260;AN=50;BaseQRankSum=1.206;DP=574;FS=6.249;HRun=0;HaplotypeScore=78.0449;InbreedingCoeff=0.0857;MQ=69.37;MQ0=14;MQRankSum=0.138;QD=0.36;ReadPosRankSum=-0.822;VQSLOD=0.6218;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:22:9.01:0,9,106	1/1:3,0:3:3:25,3,0	./.	./.	0/1:18,0:19:17.47:26,0,17	0/0:25,0:25:6.01:0,6,69	0/0:18,0:18:5.98:0,6,64	./.	0/0:18,0:18:14.98:0,15,173	0/1:23,0:23:7.72:8,0,60	0/0:20,0:20:11.96:0,12,95	0/1:4,3:7:18.91:26,0,19	0/1:25,0:25:10.01:10,0,107	0/0:16,0:16:6:0,6,51	1/1:14,0:21:8.52:42,9,0	0/1:14,0:14:15.89:16,0,77	0/1:22,4:26:14.08:14,0,122	0/1:15,3:18:10.94:11,0,207	0/0:16,0:16:5.98:0,6,47	0/0:19,0:19:9:0,9,90	0/0:15,0:15:9:0,9,78	0/0:23,0:23:9.02:0,9,110	0/0:17,0:17:8.99:0,9,76	0/0:22,0:22:9.03:0,9,132	1/1:15,0:20:6.15:29,6,0	0/0:17,0:16:20.88:0,21,158	0/0:16,0:20:10.11:0,10,64	0/0:7,0:7:3.88:0,4,26
chr10	69511829	.	T	TCA	424.89	PASS	AB=1.000;AC=6;AF=0.107;AN=56;BaseQRankSum=1.044;DP=515;FS=0.000;HRun=0;HaplotypeScore=68.7099;InbreedingCoeff=0.5457;MQ=76.15;MQ0=5;MQRankSum=-1.109;QD=5.38;ReadPosRankSum=-3.067;VQSLOD=1.1877;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,35:47:1.60:209,2,0	0/0:8,0:8:18:0,18,169	0/0:32,0:17:47.27:0,47,396	0/0:41,0:19:20.43:0,20,279	1/1:18,0:18:40.29:316,40,0	0/0:16,0:16:44.96:0,45,406	0/0:22,0:22:56.98:0,57,492	0/0:18,0:18:31.24:0,31,268	0/0:12,0:12:29.96:0,30,253	0/0:10,0:10:23.37:0,23,208	0/0:11,0:11:26.27:0,26,230	0/0:19,0:18:41.97:0,42,356	0/0:16,0:16:32.94:0,33,271	0/0:19,0:19:47.29:0,47,395	0/0:22,0:22:56.90:0,57,472	0/0:18,0:18:47.96:0,48,408	0/0:19,0:19:55.49:0,55,532	0/1:6,0:6:2.73:3,0,95	0/0:14,0:14:24:0,24,213	0/0:16,0:15:32.88:0,33,265	0/0:25,0:25:49.87:0,50,441	0/0:17,0:17:29.89:0,30,240	0/0:12,0:12:8.40:0,8,169	0/0:22,0:22:18.79:0,19,269	0/0:11,0:11:32.98:0,33,281	0/0:16,0:15:21.20:0,21,264	0/0:20,0:18:41.62:0,42,323	0/1:8,0:8:14.79:15,0,100
chr10	69511830	.	CAG	C	631.28	PASS	AB=0.868;AC=18;AF=0.346;AN=52;BaseQRankSum=0.833;DP=533;FS=35.315;HRun=0;HaplotypeScore=64.3789;InbreedingCoeff=0.4622;MQ=74.65;MQ0=5;MQRankSum=0.693;QD=3.63;ReadPosRankSum=0.763;VQSLOD=0.4499;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:28.59:0,29,283	0/1:7,0:8:8.16:8,0,16	./.	0/0:41,0:19:0:0,0,0	0/0:21,0:21:11.97:0,12,122	0/0:17,0:17:23.95:0,24,226	0/1:18,1:21:6.24:107,0,6	./.	1/1:9,1:12:5.85:46,6,0	0/1:10,1:11:23.22:23,0,61	0/0:12,0:12:9.03:0,9,133	1/1:11,8:18:9.02:97,9,0	1/1:11,4:16:5.60:64,6,0	0/1:14,5:19:13.29:85,0,13	1/1:16,6:22:9.02:97,9,0	1/1:11,7:18:15.03:161,15,0	0/0:20,0:20:21.02:0,21,237	0/0:5,0:6:8.91:0,9,66	0/0:12,0:12:12.02:0,12,137	0/0:15,0:16:2.86:0,3,25	0/0:22,0:33:3:0,3,26	1/1:17,0:17:3:32,3,0	0/0:12,0:12:6.01:0,6,70	0/0:15,0:23:8.98:0,9,93	1/1:9,1:11:8.86:78,9,0	0/0:19,0:18:27.01:0,27,289	0/0:17,0:20:14.74:0,15,99	0/0:9,0:9:9.47:0,9,81
chr10	69514802	.	C	CGTGTGTGTGTGT	2326.27	PASS	AB=0.963;AC=20;AF=0.357;AN=56;BaseQRankSum=9.723;DP=722;FS=2.465;HRun=0;HaplotypeScore=249.7738;InbreedingCoeff=0.6657;MQ=55.14;MQ0=6;MQRankSum=-6.279;QD=7.27;ReadPosRankSum=-6.967;VQSLOD=0.1609;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:45.34:0,45,527	0/0:13,0:13:33.06:0,33,870	0/0:23,0:11:8.11:0,8,111	0/1:16,0:7:6.11:6,0,34	0/0:31,0:31:36.01:0,36,409	0/0:30,0:30:78.16:0,78,1836	0/0:35,0:35:78.05:0,78,2226	0/1:41,0:40:6.04:6,0,637	0/0:22,0:22:63.06:0,63,1360	0/0:29,0:29:78.17:0,78,1852	0/0:20,0:20:53.71:0,54,1180	0/0:22,0:22:66.18:0,66,1820	0/0:21,0:21:57.07:0,57,1453	0/0:27,0:27:66.17:0,66,1751	0/0:16,0:16:39.04:0,39,788	0/0:19,0:19:48.12:0,48,1134	1/1:26,0:26:38.95:511,39,0	1/1:2,12:17:6.45:196,6,0	1/1:33,0:34:4.47:202,4,0	1/1:20,0:21:23.83:200,24,0	1/1:32,0:30:24.39:191,24,0	0/0:19,0:19:49.94:0,50,1302	1/1:27,0:27:27.46:269,27,0	1/1:33,1:36:14.44:117,14,0	0/0:32,0:32:81.19:0,81,2119	0/1:38,0:39:53.64:384,0,54	0/1:12,0:13:19.61:188,0,20	1/1:12,0:14:24.10:255,24,0
chr10	69514806	.	TGTGC	T	1231.12	PASS	AB=0.982;AC=14;AF=0.250;AN=56;BaseQRankSum=6.226;DP=717;FS=3.137;HRun=0;HaplotypeScore=148.6837;InbreedingCoeff=0.0573;MQ=53.43;MQ0=8;MQRankSum=-3.032;QD=3.93;ReadPosRankSum=-9.059;VQSLOD=0.1998;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:45.96:0,46,856	0/0:13,0:13:33.03:0,33,711	0/0:23,0:9:8.11:0,8,133	0/1:18,0:7:11.11:11,0,25	0/0:30,0:30:20.44:0,20,609	0/0:29,0:29:81.19:0,81,1726	0/0:35,0:35:77.92:0,78,1889	0/1:33,9:41:99:148,0,1005	0/0:23,0:23:64.33:0,64,1239	0/0:29,0:29:81.10:0,81,1478	0/0:22,0:22:60.05:0,60,1143	0/0:23,0:23:69.11:0,69,1517	0/0:21,0:21:63.04:0,63,1203	0/0:25,0:25:72.07:0,72,1401	0/0:15,0:15:38.83:0,39,686	0/0:18,0:18:48.09:0,48,972	1/1:26,0:26:16.72:241,17,0	0/1:15,0:15:13.54:14,0,27	0/1:33,0:32:99:177,0,171	0/1:21,0:20:24.10:108,0,24	1/1:31,0:29:25.95:196,26,0	0/0:21,0:21:55.39:0,55,1205	0/1:28,0:28:30.53:157,0,31	0/1:33,0:33:13.43:42,0,13	0/0:33,0:33:94.35:0,94,1848	0/1:39,0:38:99:162,0,391	0/1:13,0:12:7.91:8,0,101	0/1:14,0:14:71.34:133,0,71
chr10	69514834	.	CGCGCGCAT	C	1392.27	PASS	AB=0.796;AC=6;AF=0.111;AN=54;BaseQRankSum=7.009;DP=654;FS=14.617;HRun=0;HaplotypeScore=174.9902;InbreedingCoeff=0.3435;MQ=66.45;MQ0=7;MQRankSum=-6.230;QD=15.13;ReadPosRankSum=1.331;VQSLOD=1.9360;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:46,0:46:34.31:0,34,462	0/0:12,0:12:27.05:0,27,985	0/0:25,0:11:10.93:0,11,130	0/0:27,0:12:13.80:0,14,95	0/0:29,0:29:14.96:0,15,344	0/0:27,0:27:78.27:0,78,3245	0/0:30,0:30:60.12:0,60,2467	0/0:39,0:38:81.74:0,82,2443	0/0:18,0:18:51.18:0,51,2028	0/0:23,0:23:63.22:0,63,2104	0/0:25,0:25:72.25:0,72,2762	0/0:21,0:21:60.21:0,60,2072	0/0:23,0:23:63.20:0,63,2272	0/0:30,0:30:72.13:0,72,3013	0/0:9,0:9:24.08:0,24,712	0/0:19,0:19:2.75:0,3,1849	0/0:16,0:16:18.53:0,19,646	0/0:18,0:18:33.11:0,33,962	1/1:8,6:12:13.90:373,14,0	./.	0/1:7,18:25:0:0,0,0	0/0:20,0:20:54.19:0,54,2102	0/0:21,0:21:27.09:0,27,942	0/0:34,0:34:39.13:0,39,1451	0/0:30,0:30:82.52:0,83,2907	0/1:28,2:29:99:988,0,184	0/1:14,0:14:27.33:71,0,27	0/1:5,3:8:9.59:78,0,10
chr10	69514836	.	C	CGCGCAT	218.56	PASS	AB=0.992;AC=8;AF=0.143;AN=56;BaseQRankSum=2.469;DP=661;FS=11.193;HRun=0;HaplotypeScore=166.5197;InbreedingCoeff=0.4785;MQ=66.56;MQ0=6;MQRankSum=0.143;QD=1.21;ReadPosRankSum=-2.311;VQSLOD=1.3218;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:21,25:47:2.23:81,2,0	0/0:11,0:11:21.07:0,21,431	0/0:26,0:11:13.20:0,13,77	0/1:27,0:12:3.33:3,0,11	1/1:8,8:30:5.97:194,6,0	0/0:27,0:27:72.25:0,72,1506	0/0:32,0:32:48.13:0,48,893	0/0:37,0:37:54.18:0,54,1013	0/0:19,0:19:45.12:0,45,873	0/0:25,0:25:42.14:0,42,764	0/0:26,0:26:69.22:0,69,1294	0/0:22,0:22:39.12:0,39,769	0/0:21,0:21:51.17:0,51,1037	0/0:29,0:29:63.22:0,63,1291	0/0:9,0:9:12.04:0,12,232	0/0:20,0:20:42.14:0,42,849	0/0:15,0:15:20.29:0,20,392	0/0:18,0:18:24.92:0,25,498	0/0:12,0:10:20.72:0,21,238	0/1:19,0:19:0:0,0,0	0/1:25,0:25:0.28:0,0,0	0/0:21,0:21:42.14:0,42,872	0/0:22,0:22:27.05:0,27,499	0/0:35,0:35:41.77:0,42,756	0/0:30,0:30:56.34:0,56,1146	0/1:29,0:30:48.18:48,0,786	0/0:16,0:15:3.01:0,3,42	0/0:8,0:8:8.96:0,9,107
chr10	69514838	.	CGCAT	C	925.30	PASS	AB=0.883;AC=7;AF=0.125;AN=56;BaseQRankSum=10.236;DP=664;FS=26.465;HRun=0;HaplotypeScore=141.1940;InbreedingCoeff=0.4443;MQ=67.39;MQ0=5;MQRankSum=-6.579;QD=11.28;ReadPosRankSum=0.368;VQSLOD=1.6629;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:4.74:0,5,213	0/0:11,0:11:27.09:0,27,660	0/0:25,0:11:12.25:0,12,135	0/0:28,0:13:1.98:0,2,67	0/0:29,0:29:10.84:0,11,226	0/0:26,0:26:78.27:0,78,2070	0/0:34,0:34:90.72:0,91,1903	0/0:37,0:37:66.72:0,67,1697	0/0:20,0:20:60.20:0,60,1436	0/0:25,0:25:72.24:0,72,1580	0/0:26,0:26:75.26:0,75,1809	0/0:22,0:22:66.22:0,66,1461	0/0:21,0:21:60.21:0,60,1517	0/0:31,0:31:90.28:0,90,2098	0/0:9,0:9:24.08:0,24,468	0/0:21,0:21:62.95:0,63,1367	0/0:16,0:16:21.38:0,21,521	0/0:18,0:18:24.89:0,25,655	1/1:11,0:10:2.46:251,2,0	0/1:19,0:19:0:0,0,0	0/0:25,0:25:0:0,0,0	0/0:20,0:20:60.19:0,60,1450	0/0:22,0:22:30.10:0,30,726	0/0:35,0:35:42.14:0,42,1072	0/0:31,0:31:85.53:0,86,2001	0/1:28,1:29:99:663,0,112	0/1:8,7:14:25.40:56,0,25	1/1:8,0:8:9.37:74,9,0
chr10	69514840	.	CAT	C	1055.45	PASS	AB=0.852;AC=10;AF=0.179;AN=56;BaseQRankSum=11.034;DP=676;FS=31.325;HRun=0;HaplotypeScore=121.3922;InbreedingCoeff=0.2001;MQ=67.42;MQ0=5;MQRankSum=-6.110;QD=4.98;ReadPosRankSum=-0.083;VQSLOD=1.4707;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:40,8:48:99:114,0,222	0/0:11,0:11:30.10:0,30,575	0/0:24,1:11:12.42:0,12,133	0/1:30,0:13:8.48:8,0,70	0/1:28,1:29:5.58:6,0,196	0/0:26,0:26:78.27:0,78,1566	0/0:35,0:35:99:0,102,1771	0/0:38,1:39:40.44:0,40,1631	0/0:21,0:21:63.22:0,63,1181	0/0:26,0:26:75.26:0,75,1427	0/0:27,0:27:78.26:0,78,1463	0/0:23,0:23:69.24:0,69,1284	0/0:21,0:21:63.21:0,63,1215	0/0:30,0:30:90.28:0,90,1691	0/0:10,0:10:27.09:0,27,468	0/0:21,0:21:62.55:0,63,1102	0/0:18,0:18:29.71:0,30,518	0/0:19,0:19:22.87:0,23,563	0/1:8,3:10:13.28:248,0,13	0/1:15,3:18:0:0,0,0	0/1:22,2:24:0:0,0,0	0/0:21,0:21:63.20:0,63,1181	0/0:22,0:22:30.10:0,30,579	0/0:38,0:38:48.16:0,48,919	0/0:30,0:30:84.72:0,85,1584	0/1:9,20:29:59.48:675,0,59	0/1:12,3:14:34.28:57,0,34	1/1:5,3:8:11.43:79,11,0
chr10	69517383	.	AG	A	5338.82	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-0.834;DP=658;FS=14.142;HRun=9;HaplotypeScore=85.6191;InbreedingCoeff=0.9867;MQ=90.47;MQ0=0;MQRankSum=-0.616;QD=23.01;ReadPosRankSum=1.175;VQSLOD=4.3241;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,30:34:84.03:769,84,0	0/0:3,0:3:9.03:0,9,104	0/0:31,0:29:58.72:0,59,661	0/0:24,0:24:13.99:0,14,298	1/1:2,29:31:86.99:785,87,0	0/0:22,0:22:60.12:0,60,661	0/0:22,0:23:57:0,57,637	1/1:5,15:20:41.91:384,42,0	0/0:22,0:23:62.94:0,63,673	0/0:16,0:16:36.11:0,36,415	0/0:18,0:18:42.12:0,42,485	0/0:3,0:19:34.24:0,34,183	0/0:24,0:24:60.17:0,60,683	0/0:4,0:31:65.59:0,66,349	0/0:18,1:19:29.68:0,30,579	0/0:31,0:31:84.24:0,84,961	0/0:7,0:39:88.87:0,89,519	0/0:1,0:23:56.85:0,57,289	1/1:1,15:16:45.02:410,45,0	1/1:3,27:30:78.04:714,78,0	1/1:2,24:26:69.04:631,69,0	0/0:5,0:14:24.76:0,25,122	0/0:9,0:22:38.53:0,39,212	0/0:4,0:21:45.49:0,45,231	0/0:23,0:23:66.20:0,66,762	1/1:5,26:31:50.22:658,50,0	1/1:5,31:36:87.04:796,87,0	1/1:0,8:8:21.01:192,21,0
chr10	69523110	.	A	AGAACCGACTCCT	26023.09	PASS	AB=0.622;AC=25;AF=0.446;AN=56;BaseQRankSum=-2.502;DP=582;FS=22.997;HRun=0;HaplotypeScore=195.5043;InbreedingCoeff=0.9206;MQ=67.20;MQ0=0;MQRankSum=-16.823;QD=110.27;ReadPosRankSum=-2.658;VQSLOD=3.1293;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:14,16:35:66.23:3663,66,0	0/0:6,0:6:18.06:0,18,677	0/0:27,0:26:66.21:0,66,1895	0/0:26,0:26:64.02:0,64,1946	1/1:8,14:22:42.61:2479,43,0	0/0:14,0:14:36.12:0,36,1313	0/0:25,0:25:66.23:0,66,2379	1/1:22,0:22:63.20:2378,63,0	0/0:20,0:20:54.14:0,54,1816	0/0:28,0:28:75.26:0,75,2787	0/0:13,0:13:36.12:0,36,1354	0/0:21,0:21:57.20:0,57,2124	0/0:25,0:25:72.23:0,72,2601	0/0:35,0:35:99:0,105,3759	0/0:35,0:35:99:0,102,3659	0/0:35,0:35:99:0,102,3819	1/1:4,9:16:36.08:1977,36,0	1/1:4,5:11:24.06:1092,24,0	1/1:4,3:9:21.07:798,21,0	1/1:8,7:18:39.13:2252,39,0	1/1:9,4:14:21.03:995,21,0	0/0:18,0:18:54.19:0,54,1919	1/1:6,10:18:35.79:2159,36,0	1/1:7,6:14:24.08:1188,24,0	0/0:17,0:17:48.15:0,48,1719	0/1:9,12:23:99:2893,0,165	1/1:12,11:28:65.71:3411,66,0	1/1:0,4:4:12.04:737,12,0
chr10	69526408	.	GT	G	6604.83	PASS	AB=0.780;AC=27;AF=0.482;AN=56;BaseQRankSum=12.478;DP=626;FS=1.834;HRun=10;HaplotypeScore=71.9255;InbreedingCoeff=0.8138;MQ=68.44;MQ0=0;MQRankSum=-1.155;QD=18.15;ReadPosRankSum=0.829;VQSLOD=5.4823;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,25:31:68.97:599,69,0	0/1:7,1:9:8.14:8,0,129	0/0:15,0:13:27.52:0,28,273	0/0:13,0:12:18.83:0,19,177	1/1:7,29:36:80.95:703,81,0	0/0:22,0:22:57.15:0,57,623	0/1:16,3:19:24.05:24,0,419	1/1:9,29:40:87.89:724,88,0	0/0:13,0:13:33.09:0,33,365	0/0:17,1:18:22.06:0,22,458	0/0:13,0:13:36.10:0,36,398	0/0:31,0:31:84.21:0,84,915	0/0:27,2:29:34.98:0,35,810	0/0:11,0:13:35.75:0,36,352	0/0:23,0:23:60.14:0,60,653	0/0:18,1:19:22.08:0,22,472	1/1:3,24:28:71.02:605,71,0	1/1:2,16:18:41.98:365,42,0	1/1:2,9:12:29.03:240,29,0	1/1:4,30:34:50.77:670,51,0	1/1:0,22:22:59.97:517,60,0	0/0:21,0:22:37.56:0,38,582	1/1:2,18:20:27.97:416,28,0	1/1:6,26:32:44.79:618,45,0	0/0:30,0:31:78.03:0,78,835	0/1:10,28:38:3.57:647,0,4	1/1:3,14:17:35.99:313,36,0	1/1:0,8:8:18:156,18,0
chr10	69526716	.	G	GGCA	4424.17	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=19.671;DP=625;FS=4.080;HRun=0;HaplotypeScore=135.2398;InbreedingCoeff=0.9806;MQ=84.16;MQ0=0;MQRankSum=-8.261;QD=16.57;ReadPosRankSum=3.899;VQSLOD=4.3638;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:31,2:32:74.04:548,74,0	0/0:7,0:7:15.05:0,15,273	0/0:22,0:22:63.20:0,63,1060	0/0:19,0:19:51.14:0,51,861	1/1:21,2:23:62.30:481,62,0	0/0:40,0:40:99:0,117,2151	0/0:22,0:22:66.23:0,66,1202	1/1:25,0:25:45.39:473,45,0	0/0:20,0:20:60.21:0,60,1099	0/0:21,0:21:63.22:0,63,1163	0/0:14,0:14:36.12:0,36,664	0/0:37,0:37:99:0,108,1980	0/0:30,0:30:87.28:0,87,1564	0/0:24,0:24:72.23:0,72,1280	0/0:33,0:33:99:0,99,1811	0/0:23,0:23:69.24:0,69,1278	1/1:23,0:23:28.29:294,28,0	1/1:11,0:11:26.42:163,26,0	1/1:16,0:16:47.15:361,47,0	1/1:25,0:25:62.05:433,62,0	1/1:9,0:9:20.53:123,21,0	0/0:21,0:21:60.20:0,60,1071	1/1:19,0:19:47.01:324,47,0	1/1:17,0:17:31.76:208,32,0	0/0:25,0:24:75.24:0,75,1340	1/1:30,0:30:5.57:434,6,0	1/1:28,0:27:70.72:458,71,0	1/1:8,0:8:20.55:124,21,0
chr10	69526717	.	T	TCATG	19691.30	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-14.155;DP=648;FS=2.577;HRun=0;HaplotypeScore=97.9578;InbreedingCoeff=0.9966;MQ=82.79;MQ0=0;MQRankSum=-7.015;QD=68.14;ReadPosRankSum=3.496;VQSLOD=7.2100;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,28:35:75.26:2169,75,0	0/0:7,0:7:18:0,18,297	0/0:21,0:21:60.19:0,60,1156	0/0:19,0:19:57.15:0,57,1063	1/1:4,20:28:66.18:1839,66,0	0/0:40,0:40:99:0,117,2401	0/0:22,0:22:66.20:0,66,1306	1/1:6,17:26:72.22:1875,72,0	0/0:21,0:21:60.21:0,60,1245	0/0:21,0:21:63.22:0,63,1310	0/0:14,0:14:39.10:0,39,741	0/0:37,0:37:99:0,111,2241	0/0:29,0:29:84.27:0,84,1683	0/0:25,0:25:72.20:0,72,1375	0/0:34,0:34:99:0,99,1991	0/0:23,0:23:69.24:0,69,1429	1/1:2,20:25:48.16:1389,48,0	1/1:3,11:14:30.10:864,30,0	1/1:5,15:20:57.20:1647,57,0	1/1:3,24:29:69.19:1898,69,0	1/1:2,8:10:21.07:609,21,0	0/0:20,0:20:60.18:0,60,1161	1/1:2,17:21:51.18:1474,51,0	1/1:0,16:17:33.34:955,33,0	0/0:26,0:25:75.24:0,75,1511	1/1:1,26:27:18.34:2197,18,0	1/1:1,26:28:75.26:2168,75,0	1/1:0,8:8:21.07:608,21,0
chr10	69526958	.	T	TG	2333.89	PASS	AB=0.575;AC=11;AF=0.196;AN=56;BaseQRankSum=-4.347;DP=604;FS=6.534;HRun=9;HaplotypeScore=70.7048;InbreedingCoeff=0.9101;MQ=78.46;MQ0=2;MQRankSum=-0.825;QD=18.82;ReadPosRankSum=-0.806;VQSLOD=3.5553;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:68.93:0,69,592	0/0:12,0:12:29.96:0,30,255	0/0:25,0:24:12.07:0,12,241	0/0:26,0:25:33.63:0,34,327	0/0:16,0:16:26.98:0,27,234	0/0:26,0:26:71.81:0,72,604	0/0:16,0:16:35.92:0,36,301	0/0:20,0:20:29.96:0,30,258	0/0:31,0:31:65.88:0,66,557	0/0:24,0:24:56.97:0,57,491	0/0:15,0:15:38.98:0,39,336	0/0:23,0:23:59.97:0,60,517	0/0:24,0:24:53.98:0,54,468	0/0:25,0:25:71.98:0,72,625	0/0:28,0:29:73.99:0,74,627	0/0:27,0:27:74.91:0,75,635	0/0:25,0:25:68.97:0,69,595	0/0:19,0:19:41.98:0,42,365	1/1:7,7:16:29.58:273,30,0	0/1:6,17:23:4.02:401,0,4	1/1:10,21:31:53.06:594,53,0	0/0:14,0:14:38.98:0,39,336	0/0:18,0:18:47.97:0,48,413	0/0:14,0:14:35.93:0,36,303	0/0:22,0:22:57.41:0,57,489	1/1:6,20:26:60.16:660,60,0	1/1:4,15:19:39.05:417,39,0	1/1:3,6:9:15.04:166,15,0
chr10	69528226	.	TGTGTGTGTGA	T	1021.88	PASS	AB=0.907;AC=15;AF=0.268;AN=56;BaseQRankSum=7.952;DP=614;FS=0.478;HRun=0;HaplotypeScore=175.2056;InbreedingCoeff=0.4930;MQ=50.57;MQ0=18;MQRankSum=-1.483;QD=4.10;ReadPosRankSum=-2.080;VQSLOD=2.4638;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:28:26.46:180,26,0	0/0:8,0:8:14.95:0,15,169	1/1:23,0:8:11.27:60,11,0	0/1:38,0:15:59.60:60,0,65	0/1:26,0:25:2.02:35,0,2	0/0:23,0:23:24.45:0,24,751	0/0:19,0:19:9.89:0,10,723	0/1:23,0:23:26.76:126,0,27	0/0:23,0:23:46.63:0,47,1071	0/0:24,0:24:38.39:0,38,808	0/0:19,0:18:37.84:0,38,720	0/0:19,0:19:36.52:0,37,690	0/0:14,0:14:41.45:0,41,516	0/0:18,0:18:42.91:0,43,807	0/0:20,0:20:30.10:0,30,1043	0/0:26,0:26:42.98:0,43,1305	1/1:20,0:20:47.62:368,48,0	0/1:6,18:24:21.49:119,0,21	0/0:17,0:17:12.82:0,13,221	0/0:23,0:23:15.90:0,16,289	0/1:26,0:22:15.94:16,0,230	0/0:34,0:32:63.05:0,63,1602	1/1:5,16:21:0.16:0,0,0	1/1:18,0:16:21.66:230,22,0	0/0:23,0:23:54.07:0,54,1036	0/0:29,0:27:8.15:0,8,576	0/0:22,0:22:25.31:0,25,590	0/0:4,0:3:6:0,6,52
chr10	69528236	.	AGTGT	A	508.37	PASS	AB=0.969;AC=21;AF=0.389;AN=54;BaseQRankSum=2.995;DP=598;FS=5.937;HRun=0;HaplotypeScore=121.1818;InbreedingCoeff=0.2054;MQ=49.80;MQ0=20;MQRankSum=0.309;QD=1.74;ReadPosRankSum=-2.241;VQSLOD=1.7119;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:28:0.05:0,0,0	0/0:4,0:4:3.01:0,3,56	0/0:18,0:5:0:0,0,0	./.	0/0:23,0:21:4.55:0,5,28	0/1:23,0:23:9.43:9,0,289	0/0:22,0:22:15.52:0,16,274	0/0:16,0:16:5.94:0,6,41	0/0:26,0:26:29.61:0,30,443	0/0:24,0:24:20.84:0,21,278	0/0:22,0:21:30.54:0,31,425	0/0:17,0:17:14.92:0,15,160	0/1:15,0:15:9.79:10,0,65	0/0:19,0:19:12.01:0,12,166	0/1:17,0:17:22.53:23,0,330	0/0:28,0:28:27.63:0,28,474	0/0:22,0:21:3.66:0,4,21	1/1:23,0:23:1.27:38,1,0	1/1:17,0:17:1.89:9,2,0	1/1:16,9:25:1.77:4,2,0	1/1:27,0:23:20.35:227,20,0	0/0:26,2:26:41.85:0,42,620	1/1:21,0:21:0.47:1,0,0	1/1:20,0:18:0.29:2,0,0	0/1:21,0:21:17.15:17,0,337	0/1:27,1:25:29.72:64,0,30	0/1:17,3:22:47.38:202,0,47	1/1:2,2:3:3.01:47,3,0
chr10	69529604	.	T	TGGTGGGC	943.67	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-3.103;DP=577;FS=3.534;HRun=0;HaplotypeScore=131.5684;InbreedingCoeff=0.9129;MQ=82.00;MQ0=0;MQRankSum=-1.832;QD=36.29;ReadPosRankSum=-4.506;VQSLOD=2.3078;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:87.23:0,87,1964	0/0:5,0:5:12.04:0,12,265	0/0:24,0:24:33.74:0,34,1134	0/0:13,0:13:27.09:0,27,646	0/0:14,0:14:39.59:0,40,878	0/0:24,0:24:63:0,63,1326	0/0:23,0:23:63.18:0,63,1368	1/1:12,9:26:41.88:1038,42,0	0/0:19,0:19:51.07:0,51,1061	0/0:13,0:13:33.10:0,33,714	0/0:11,0:11:30.06:0,30,729	0/0:25,0:25:65.40:0,65,1440	0/0:24,0:24:63.20:0,63,1449	0/0:28,0:28:75.26:0,75,1783	0/0:31,0:31:66.21:0,66,1527	0/0:17,0:17:48.15:0,48,1087	0/0:26,0:26:72.20:0,72,1593	0/0:10,0:10:21.07:0,21,510	0/0:19,0:19:39.12:0,39,878	0/0:15,0:15:33.01:0,33,669	0/0:40,0:40:99:0,102,2417	0/0:14,0:14:36.06:0,36,813	0/0:16,0:16:39.08:0,39,825	0/0:35,0:35:90.29:0,90,2129	0/0:27,0:27:78.20:0,78,1710	0/0:21,0:21:54.16:0,54,1224	0/0:16,0:16:42.11:0,42,939	0/0:4,0:4:9.03:0,9,219
chr10	69529856	.	G	GA	4456.13	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=3.670;DP=591;FS=10.410;HRun=9;HaplotypeScore=75.9265;InbreedingCoeff=0.9887;MQ=77.77;MQ0=0;MQRankSum=-1.761;QD=25.18;ReadPosRankSum=-1.842;VQSLOD=4.3763;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,21:28:19.92:648,20,0	0/0:6,0:6:18:0,18,156	0/0:20,0:19:42.41:0,42,360	0/0:9,0:9:14.99:0,15,130	1/1:2,24:26:46.10:724,46,0	0/0:30,0:30:83.96:0,84,725	0/0:12,0:12:32.99:0,33,286	1/1:8,25:33:75.20:829,75,0	0/0:22,0:22:59.99:0,60,521	0/0:20,0:20:47.96:0,48,412	0/0:16,0:16:41.99:0,42,364	0/0:20,0:20:59.99:0,60,521	0/0:16,0:16:41.99:0,42,365	0/0:26,0:27:62.01:0,62,527	0/0:20,0:20:32.48:0,32,440	0/0:16,0:16:47.94:0,48,405	1/1:3,29:32:81.22:896,81,0	1/1:4,16:20:39.11:430,39,0	0/0:19,0:19:47.98:0,48,417	0/0:23,0:23:56.96:0,57,495	0/0:27,0:27:80.97:0,81,699	0/0:18,0:18:50.99:0,51,443	1/1:2,12:14:27.07:299,27,0	1/1:2,22:24:57.15:631,57,0	0/0:26,0:26:77.98:0,78,677	0/0:41,0:41:99:0,111,960	0/0:22,0:22:62.97:0,63,543	0/0:4,0:4:12:0,12,104
chr10	69530552	.	CTATCTATCTATCTATCTATCTA	C	2249.33	PASS	AB=0.931;AC=18;AF=0.321;AN=56;BaseQRankSum=5.207;DP=655;FS=24.215;HRun=0;HaplotypeScore=299.5594;InbreedingCoeff=-0.0046;MQ=56.28;MQ0=40;MQRankSum=-5.118;QD=6.75;ReadPosRankSum=-1.411;VQSLOD=0.7875;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:8,15:21:4.58:93,0,5	0/0:7,0:6:12.04:0,12,611	1/1:3,0:3:5.38:52,5,0	0/1:13,0:7:5.88:6,0,67	1/1:7,35:42:17.68:612,18,0	0/0:22,0:19:5.24:0,5,2215	0/1:15,0:14:24.74:25,0,656	0/1:26,0:23:99:136,0,236	0/0:27,0:25:33.11:0,33,1284	0/1:30,0:24:65.51:66,0,2934	0/0:22,0:19:27.14:0,27,2891	0/0:27,0:23:51.18:0,51,3039	0/0:29,0:25:60.04:0,60,4565	0/0:21,0:20:47.02:0,47,2299	0/0:34,0:32:33.10:0,33,1582	0/0:30,0:30:27.08:0,27,1039	0/1:4,13:17:1.69:173,0,2	0/1:13,0:9:55.31:312,0,55	0/1:26,0:23:99:322,0,200	0/0:29,0:27:3.43:0,3,81	0/1:25,0:20:11.20:11,0,189	0/1:16,0:11:61.78:62,0,886	1/1:3,14:15:3.01:96,3,0	0/0:3,16:19:1.55:0,2,4	0/0:31,0:29:48.59:0,49,2380	0/1:38,0:37:99:394,0,338	0/1:28,0:25:46.39:54,0,46	0/0:24,0:23:8.42:0,8,333
chr10	69530560	.	CTATCTATCTATCTA	C	6954.42	PASS	AB=1.000;AC=33;AF=0.589;AN=56;BaseQRankSum=1.446;DP=668;FS=21.025;HRun=0;HaplotypeScore=207.3498;InbreedingCoeff=0.1082;MQ=57.54;MQ0=61;MQRankSum=-2.562;QD=14.11;ReadPosRankSum=-4.661;VQSLOD=1.4606;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:18:7.84:90,8,0	0/1:7,0:6:30.89:31,0,298	0/1:10,0:7:6.22:121,0,6	0/1:12,0:8:61.36:94,0,61	1/1:36,0:36:16.77:206,17,0	0/1:23,0:17:4.60:5,0,1034	0/1:19,0:15:99:240,0,177	1/1:31,0:22:42:496,42,0	0/0:28,0:25:24.06:0,24,624	0/1:32,0:22:71.53:72,0,1353	0/1:25,0:20:77.61:78,0,1520	0/1:25,0:20:12.78:13,0,1504	0/0:30,0:25:57.03:0,57,2724	0/1:22,0:19:47.93:48,0,1008	0/0:38,0:32:21.07:0,21,874	0/0:30,0:29:18.06:0,18,328	1/1:17,0:17:1.33:100,1,0	0/1:10,0:9:11.15:84,0,11	1/1:7,17:20:45.15:1063,45,0	1/1:3,24:25:9.03:219,9,0	1/1:24,0:19:20.95:354,21,0	0/1:18,0:12:99:142,0,361	1/1:17,0:14:3.01:43,3,0	0/0:18,0:18:0.89:0,1,2	0/0:31,0:27:36.58:0,37,1245	1/1:5,36:39:99:2674,103,0	1/1:5,24:25:18.06:660,18,0	1/1:10,8:17:3.01:123,3,0
chr10	69530568	.	CTATCTA	C	5782.52	PASS	AB=0.992;AC=36;AF=0.643;AN=56;BaseQRankSum=-2.953;DP=651;FS=16.214;HRun=0;HaplotypeScore=145.1286;InbreedingCoeff=0.0941;MQ=58.31;MQ0=72;MQRankSum=-3.517;QD=11.29;ReadPosRankSum=-2.504;VQSLOD=2.8368;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:17:6.02:85,6,0	0/1:7,0:5:33.92:34,0,44	0/1:14,0:10:4.93:195,0,5	0/1:15,0:11:95.46:161,0,95	1/1:35,0:35:8.74:120,9,0	0/1:23,0:16:99:155,0,150	1/1:18,0:14:24.55:345,25,0	1/1:29,0:19:49.02:584,49,0	0/0:28,0:24:4.73:0,5,122	0/1:32,1:22:99:272,0,157	0/1:26,0:21:99:127,0,228	0/1:27,0:19:85.71:86,0,234	0/0:30,0:25:35.16:0,35,909	0/1:18,1:16:99:228,0,149	0/0:33,0:27:5.93:0,6,186	1/1:3,27:29:15.05:339,15,0	1/1:17,0:17:3.46:52,3,0	0/1:16,0:10:2.85:110,0,3	1/1:21,0:17:42.14:631,42,0	1/1:24,0:23:8.06:91,8,0	1/1:19,0:18:13.63:213,14,0	0/1:19,0:13:7.30:249,0,7	1/1:17,0:14:3.01:43,3,0	0/0:18,0:18:2.68:0,3,11	0/0:30,0:25:13.71:0,14,168	1/1:39,0:37:75.77:1328,76,0	1/1:27,0:24:18.06:286,18,0	1/1:9,0:8:3.01:49,3,0
chr10	69530572	.	CTA	C	8109.35	PASS	AB=0.945;AC=52;AF=0.929;AN=56;BaseQRankSum=-4.522;DP=641;FS=1.693;HRun=0;HaplotypeScore=108.7048;InbreedingCoeff=-0.1095;MQ=60.72;MQ0=70;MQRankSum=-0.378;QD=12.65;ReadPosRankSum=1.286;VQSLOD=4.7956;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:18,2:17:7.84:90,8,0	1/1:2,4:4:9.03:129,9,0	1/1:8,8:12:2.61:240,3,0	0/1:13,4:13:93.20:179,0,93	1/1:35,0:35:8.87:92,9,0	1/1:3,21:17:36.12:515,36,0	1/1:4,11:11:23.97:343,24,0	1/1:1,26:17:48.15:666,48,0	0/1:25,0:21:10.58:61,0,11	1/1:6,26:21:57.16:794,57,0	1/1:4,21:20:45.15:644,45,0	1/1:8,20:20:44.98:644,45,0	0/1:30,0:25:38.83:39,0,110	1/1:3,18:18:36.10:483,36,0	0/1:34,1:29:16.11:92,0,16	1/1:30,0:29:14.94:120,15,0	1/1:16,1:17:4.42:33,4,0	1/1:5,8:7:11.70:144,12,0	1/1:19,1:17:41.97:491,42,0	1/1:25,0:23:2.35:80,2,0	1/1:6,15:16:11.44:210,11,0	1/1:3,17:14:27.09:387,27,0	1/1:16,1:14:3.01:43,3,0	1/1:18,0:18:2.50:9,2,0	1/1:23,5:23:15.79:303,16,0	1/1:38,0:36:79.41:1037,79,0	1/1:29,0:24:17.99:210,18,0	1/1:9,0:8:3.01:31,3,0
chr10	69530574	.	A	ATCTATC	6459.09	PASS	AB=0.897;AC=36;AF=0.643;AN=56;BaseQRankSum=-8.461;DP=652;FS=8.392;HRun=0;HaplotypeScore=141.7869;InbreedingCoeff=-0.2352;MQ=60.72;MQ0=70;MQRankSum=-0.034;QD=10.89;ReadPosRankSum=-1.953;VQSLOD=3.0539;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:18,0:17:2.57:80,3,0	0/1:4,0:4:33.93:34,0,43	0/1:16,0:12:4.82:230,0,5	0/1:17,0:13:86.58:167,0,87	0/1:36,0:36:1.57:64,0,2	0/1:22,0:17:99:166,0,100	1/1:14,0:11:27.07:367,27,0	1/1:27,0:18:48.15:666,48,0	1/1:1,18:23:12.04:435,12,0	0/1:28,0:21:99:395,0,99	0/1:23,0:20:99:127,0,263	0/1:22,0:20:99:145,0,243	1/1:0,0:24:51.25:373,51,0	0/1:21,0:19:99:105,0,183	1/1:1,25:31:17.85:556,18,0	0/0:29,0:29:9.52:0,10,80	1/1:16,0:17:4.36:33,4,0	1/1:9,0:6:14.07:161,14,0	0/1:20,0:19:99:344,0,105	1/1:25,0:23:2.26:80,2,0	1/1:22,0:17:14.45:252,14,0	0/1:17,0:12:11.70:248,0,12	1/1:15,0:14:3.01:43,3,0	0/0:17,0:18:0.89:0,1,2	0/1:7,17:26:88.88:514,0,89	0/1:36,0:36:99:725,0,126	0/1:26,0:24:42.74:150,0,43	0/0:11,0:10:1.06:0,1,5
chr10	69530816	.	G	GTCTATCTA	785.37	PASS	AB=0.647;AC=9;AF=0.167;AN=54;BaseQRankSum=4.504;DP=629;FS=9.274;HRun=0;HaplotypeScore=167.7470;InbreedingCoeff=0.7893;MQ=56.01;MQ0=8;MQRankSum=-0.253;QD=6.66;ReadPosRankSum=1.188;VQSLOD=1.8239;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:7,0:25:19.49:136,19,0	0/0:10,0:10:27.01:0,27,486	0/0:19,0:10:6:0,6,53	./.	1/1:5,0:38:41.93:353,42,0	0/0:19,0:19:36.12:0,36,777	0/0:18,0:18:15.12:0,15,605	0/0:40,0:40:60.17:0,60,900	0/0:27,0:27:57.18:0,57,1191	0/0:23,0:23:60.18:0,60,1281	0/0:24,0:24:57.09:0,57,1059	0/0:23,0:23:63.14:0,63,1134	0/0:21,0:21:54.07:0,54,997	0/0:19,0:19:39.13:0,39,807	0/0:30,0:30:66.15:0,66,1288	0/0:22,0:22:57.17:0,57,1296	0/1:5,6:11:9.69:119,0,10	1/1:21,0:21:14.81:81,15,0	0/0:21,0:19:20.50:0,20,149	0/0:38,0:38:67.26:0,67,657	0/0:17,0:17:26:0,26,156	0/0:25,0:25:60.03:0,60,1064	1/1:6,16:23:6.02:250,6,0	0/0:2,6:11:0:0,0,0	0/0:33,0:33:75.21:0,75,1631	0/0:25,0:25:47.87:0,48,331	0/0:22,0:22:38.02:0,38,329	0/0:19,0:17:29.56:0,30,317
chr10	69530838	.	C	CATCT	5732.23	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=-6.341;DP=595;FS=8.454;HRun=0;HaplotypeScore=110.9796;InbreedingCoeff=0.8223;MQ=59.02;MQ0=8;MQRankSum=-0.912;QD=41.24;ReadPosRankSum=2.156;VQSLOD=5.2374;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:22:15.17:0,15,117	0/0:10,0:10:24.08:0,24,412	0/0:15,0:6:14.64:0,15,210	0/0:4,0:3:5.91:0,6,61	0/0:35,0:35:20:0,20,192	0/0:19,0:19:42.11:0,42,666	0/0:13,0:14:17.11:0,17,459	0/0:35,0:35:75.26:0,75,1277	0/0:24,0:24:51.17:0,51,875	0/0:30,0:30:81.23:0,81,1289	0/0:24,0:24:54.18:0,54,917	0/0:24,0:24:57.15:0,57,947	0/0:25,0:25:69.24:0,69,1184	0/0:24,0:24:66.20:0,66,1079	0/0:27,0:27:51.14:0,51,810	0/0:20,0:20:57.18:0,57,952	0/0:11,0:12:0.94:0,1,190	0/0:17,0:22:31.19:0,31,593	1/1:3,10:12:27.08:677,27,0	1/1:9,28:37:57.17:1426,57,0	1/1:2,11:14:24.08:604,24,0	0/0:23,0:23:54.18:0,54,927	0/1:20,0:20:7.79:8,0,92	0/0:14,0:14:5.89:0,6,103	0/0:32,0:32:78.25:0,78,1296	1/1:1,22:26:75.23:1758,75,0	1/1:6,11:17:39.12:882,39,0	1/1:7,5:10:15.05:377,15,0
chr10	69532772	.	A	AT	5840.62	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-13.289;DP=696;FS=4.239;HRun=6;HaplotypeScore=64.7340;InbreedingCoeff=0.9981;MQ=78.22;MQ0=0;MQRankSum=-2.263;QD=37.20;ReadPosRankSum=0.527;VQSLOD=3.3956;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,24:24:51.17:764,51,0	0/0:8,0:8:24.08:0,24,312	0/0:18,0:18:48.09:0,48,572	0/0:18,0:17:41.90:0,42,490	1/1:2,29:31:84.28:1249,84,0	0/0:29,0:29:81.25:0,81,1034	0/0:20,0:20:54.16:0,54,685	1/1:3,36:39:99:1536,108,0	0/0:14,0:14:42.12:0,42,530	0/0:38,0:38:99:0,108,1402	0/0:17,0:16:48.14:0,48,608	0/0:28,0:28:84.26:0,84,1074	0/0:44,0:44:99:0,126,1620	0/0:30,0:30:90.27:0,90,1142	0/0:31,0:30:93.24:0,93,1147	0/0:24,0:24:72.22:0,72,918	1/1:0,14:14:36.12:539,36,0	1/1:0,7:7:18.06:270,18,0	0/0:19,0:19:57.19:0,57,739	0/0:38,0:38:99:0,108,1399	0/0:34,0:34:99:0,99,1267	0/0:30,0:30:87.27:0,87,1115	1/1:1,24:25:57.19:854,57,0	1/1:0,17:17:42.14:629,42,0	0/0:16,0:16:48.16:0,48,623	0/0:33,0:33:96.29:0,96,1217	0/0:38,0:37:99:0,111,1423	0/0:12,0:12:36.12:0,36,467
chr10	69532872	.	A	ACTAT	3801.27	PASS	AB=0.819;AC=15;AF=0.288;AN=52;BaseQRankSum=-9.684;DP=604;FS=2.931;HRun=0;HaplotypeScore=110.3267;InbreedingCoeff=0.5424;MQ=79.41;MQ0=3;MQRankSum=2.412;QD=16.60;ReadPosRankSum=-2.439;VQSLOD=2.8874;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:7,0:14:24.02:0,24,220	0/0:7,0:8:6.01:0,6,72	./.	./.	0/0:9,0:14:11.95:0,12,97	1/1:7,7:14:16.96:419,17,0	0/0:27,0:27:18.02:0,18,230	0/1:28,0:28:0.01:0,0,0	0/0:25,0:25:27.09:0,27,411	1/1:6,7:13:24.08:528,24,0	0/1:12,8:20:24.79:398,0,25	1/1:14,12:27:24.08:547,24,0	1/1:22,16:39:39.13:908,39,0	0/1:14,14:29:18.78:532,0,19	0/0:34,0:34:39.11:0,39,573	0/1:21,12:34:70.68:328,0,71	0/0:19,0:22:3:0,3,27	0/0:8,0:13:15.02:0,15,140	0/0:11,0:11:6.02:0,6,92	0/0:15,0:15:24.07:0,24,345	0/0:35,0:38:66.19:0,66,930	1/1:14,5:19:5.94:140,6,0	0/1:2,0:6:0:0,0,0	0/0:13,0:20:3.89:0,4,31	0/0:10,0:16:15.02:0,15,140	0/0:13,0:13:24.07:0,24,348	0/0:27,0:30:45.10:0,45,607	0/0:16,0:18:30.09:0,30,420
chr10	69535375	.	A	AT	2848.18	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=5.461;DP=490;FS=6.059;HRun=8;HaplotypeScore=65.6383;InbreedingCoeff=0.6806;MQ=75.25;MQ0=0;MQRankSum=0.763;QD=15.23;ReadPosRankSum=-0.328;VQSLOD=3.5167;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,8:11:12.01:230,12,0	0/0:7,0:7:15:0,15,134	0/0:7,0:7:4.95:0,5,42	0/0:11,0:12:9.66:0,10,61	1/1:5,22:27:66.02:696,66,0	0/0:31,0:31:84.02:0,84,764	0/0:14,0:14:36:0,36,322	0/0:25,0:25:66.03:0,66,600	0/0:9,0:9:20.98:0,21,186	0/0:19,0:19:44.98:0,45,402	0/0:20,0:20:34.10:0,34,420	0/0:14,0:14:33:0,33,296	0/0:20,0:20:59.98:0,60,534	0/0:21,0:21:57:0,57,515	0/0:20,0:20:56.97:0,57,506	0/0:12,0:12:30:0,30,272	1/1:0,24:24:60.17:684,60,0	1/1:0,10:10:27.08:309,27,0	0/1:23,0:23:21.80:48,0,22	0/1:29,0:29:51.41:51,0,65	0/0:10,0:10:12.47:0,12,37	0/0:15,0:15:27:0,27,247	1/1:3,19:22:51.10:567,51,0	1/1:2,14:16:36.10:410,36,0	0/0:16,0:16:48.03:0,48,439	0/1:25,0:25:42.64:44,0,43	0/0:23,0:23:13.10:0,13,84	0/0:8,0:8:14.10:0,14,42
chr10	69535846	.	C	CT	5028.50	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-10.641;DP=534;FS=7.830;HRun=3;HaplotypeScore=52.0112;InbreedingCoeff=0.9964;MQ=84.05;MQ0=0;MQRankSum=-0.693;QD=40.23;ReadPosRankSum=0.778;VQSLOD=4.5070;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:78.23:0,78,992	0/0:10,0:10:30.10:0,30,390	0/0:20,0:20:42.25:0,42,588	0/0:15,0:15:33.12:0,33,356	0/0:25,0:25:75.24:0,75,973	0/0:17,0:17:48.13:0,48,606	0/0:12,0:12:36.12:0,36,467	0/0:31,0:31:84.27:0,84,1089	0/0:23,0:23:69.21:0,69,879	0/0:23,0:23:66.21:0,66,846	0/0:10,0:10:30.08:0,30,372	0/0:16,0:16:45.15:0,45,584	0/0:24,0:24:69.22:0,69,891	0/0:18,0:18:54.11:0,54,680	0/0:23,0:23:66.21:0,66,857	0/0:13,0:13:33.05:0,33,408	0/0:26,0:26:72.23:0,72,928	0/0:16,0:16:48.16:0,48,622	1/1:1,25:26:78.22:1121,78,0	1/1:2,22:24:60.17:875,60,0	1/1:0,20:20:57.19:854,57,0	0/0:14,0:14:36.12:0,36,467	0/0:17,0:17:48.16:0,48,623	0/0:15,0:15:45.15:0,45,583	0/0:13,0:13:39.13:0,39,506	1/1:0,26:26:75.22:1100,75,0	1/1:0,24:24:57.19:854,57,0	1/1:0,5:5:15.05:225,15,0
chr10	69535971	.	TTTTTCTTTTC	T	2878.42	PASS	AB=0.826;AC=9;AF=0.167;AN=54;BaseQRankSum=0.155;DP=495;FS=24.367;HRun=0;HaplotypeScore=163.4140;InbreedingCoeff=0.7948;MQ=66.96;MQ0=9;MQRankSum=-4.459;QD=44.98;ReadPosRankSum=-0.257;VQSLOD=1.8363;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:26:60.16:0,60,2134	0/0:3,0:3:9.03:0,9,379	0/0:21,0:14:31.16:0,31,586	0/0:19,0:12:19.22:0,19,279	0/0:33,0:33:78.22:0,78,2526	0/0:10,0:10:30.10:0,30,1039	0/0:21,0:20:60.21:0,60,2409	0/0:34,0:33:76.61:0,77,1790	0/0:9,0:9:27.09:0,27,1073	0/0:26,0:26:69.02:0,69,2317	0/0:24,0:24:60.16:0,60,1775	0/0:19,0:19:51.17:0,51,1640	0/0:24,0:24:63.15:0,63,1880	0/0:11,0:11:30.03:0,30,852	0/0:14,0:14:39.13:0,39,1491	0/0:18,0:17:45.60:0,46,1564	0/0:27,0:26:54.12:0,54,1778	0/0:13,0:13:14.20:0,14,674	1/1:7,0:7:18.03:236,18,0	1/1:13,2:15:43.20:822,43,0	1/1:2,1:3:3.01:88,3,0	0/0:19,0:19:45.02:0,45,1480	0/0:21,0:21:45.05:0,45,1236	0/0:18,0:16:45.15:0,45,1743	0/0:19,0:19:48.11:0,48,1529	0/1:15,4:19:94.14:922,0,94	1/1:17,3:20:54.04:965,54,0	./.
chr10	69535978	.	TTTC	T	674.75	PASS	AB=0.948;AC=7;AF=0.130;AN=54;BaseQRankSum=3.709;DP=501;FS=0.583;HRun=0;HaplotypeScore=106.6043;InbreedingCoeff=0.4871;MQ=57.33;MQ0=22;MQRankSum=-6.056;QD=8.13;ReadPosRankSum=-5.313;VQSLOD=0.9473;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:28:56.97:0,57,747	0/0:5,0:4:11.93:0,12,172	0/0:16,0:9:21.77:0,22,197	0/0:16,0:9:10.73:0,11,100	0/0:33,0:33:74.48:0,74,886	0/0:11,0:11:32.25:0,32,396	0/0:25,0:24:69.04:0,69,1023	0/0:29,0:28:60.69:0,61,661	0/0:12,0:12:31.32:0,31,487	0/0:23,0:23:65.60:0,66,889	0/0:23,0:23:51.92:0,52,672	0/0:19,0:19:40.52:0,41,558	0/0:22,0:22:56.03:0,56,630	0/0:12,0:11:23.48:0,23,331	0/0:16,0:16:41.95:0,42,572	0/0:17,0:15:39.05:0,39,570	0/0:28,0:26:50.83:0,51,620	0/1:17,0:12:4.46:4,0,206	0/1:7,1:7:5.37:76,0,5	1/1:15,1:16:24.40:293,24,0	0/0:3,1:3:0.89:0,1,3	0/0:13,0:13:13.11:0,13,500	0/0:25,0:25:38.83:0,39,455	0/0:18,0:16:44.96:0,45,561	0/0:20,0:20:38.86:0,39,541	0/1:20,1:21:27.93:251,0,28	1/1:20,1:20:3.58:178,4,0	./.
chr10	69535983	.	T	TTTC	4855.25	PASS	AB=0.948;AC=17;AF=0.304;AN=56;BaseQRankSum=-4.680;DP=523;FS=14.108;HRun=0;HaplotypeScore=103.3296;InbreedingCoeff=0.4436;MQ=54.67;MQ0=31;MQRankSum=2.434;QD=17.46;ReadPosRankSum=6.768;VQSLOD=3.2337;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,25:29:60.16:1070,60,0	0/0:6,0:5:14.94:0,15,176	0/0:16,0:9:12.08:0,12,118	0/0:15,0:8:8.81:0,9,46	1/1:9,28:37:71.77:1101,72,0	0/0:10,0:10:2.29:0,2,314	0/1:25,0:24:3.98:4,0,259	0/1:28,0:27:57.89:58,0,196	0/0:12,0:12:33.03:0,33,447	0/0:24,0:23:65.93:0,66,760	0/0:23,0:22:44.85:0,45,552	0/0:20,0:19:47.98:0,48,543	0/0:21,0:21:43.58:0,44,513	0/0:12,0:10:27.02:0,27,365	0/0:17,0:16:42.07:0,42,558	0/0:17,0:15:38.35:0,38,521	1/1:9,21:27:36.97:744,37,0	0/1:8,10:13:0.58:276,0,1	0/1:13,0:12:4.21:4,0,86	0/0:19,0:19:12.04:0,12,176	0/1:8,0:6:13.94:34,0,14	0/0:12,0:12:36:0,36,453	1/1:3,22:26:29.90:487,30,0	1/1:5,12:17:27.47:752,27,0	0/0:20,0:19:44.33:0,44,523	0/1:23,0:23:91.98:122,0,92	0/1:18,0:17:27.19:204,0,27	0/0:1,0:1:0:0,0,0
chr10	69535984	.	T	TTC	2480.92	PASS	AB=0.944;AC=18;AF=0.321;AN=56;BaseQRankSum=4.732;DP=516;FS=25.227;HRun=0;HaplotypeScore=99.4507;InbreedingCoeff=0.4707;MQ=53.33;MQ0=32;MQRankSum=2.513;QD=9.36;ReadPosRankSum=6.893;VQSLOD=1.2547;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:31,2:30:52.24:578,52,0	0/0:6,0:5:14.85:0,15,162	0/0:15,0:8:11.67:0,12,107	0/0:15,0:8:1.11:0,1,28	1/1:34,3:37:10.01:611,10,0	0/0:10,0:10:28.17:0,28,323	0/1:25,0:24:11.99:12,0,144	0/0:28,0:27:46.66:0,47,360	0/0:12,0:12:32.88:0,33,423	0/0:25,0:23:65.91:0,66,720	0/0:21,0:20:44.86:0,45,523	0/0:21,0:20:50.97:0,51,537	0/0:20,0:20:44.41:0,44,527	0/0:12,0:10:27.03:0,27,338	0/0:17,0:16:42.07:0,42,527	0/0:17,0:15:38.97:0,39,497	1/1:29,1:27:32.66:378,33,0	1/1:18,0:12:5.01:129,5,0	0/1:13,0:12:27.10:27,0,72	0/1:15,0:15:0.86:1,0,148	0/1:7,0:6:4.34:4,0,31	0/0:12,0:12:35.87:0,36,413	1/1:25,1:26:29.79:297,30,0	1/1:19,0:17:27.38:356,27,0	0/0:19,0:18:44.81:0,45,504	0/1:21,0:23:75.85:104,0,76	0/1:15,0:17:31.72:167,0,32	0/0:1,0:1:2.97:0,3,20
chr10	69536578	.	CT	C	9517.90	PASS	AB=0.927;AC=54;AF=0.964;AN=56;BaseQRankSum=1.643;DP=369;FS=30.486;HRun=2;HaplotypeScore=153.5487;InbreedingCoeff=-0.0464;MQ=93.23;MQ0=0;MQRankSum=-6.575;QD=25.79;ReadPosRankSum=4.726;VQSLOD=2.6526;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:13,3:16:41.19:417,41,0	1/1:6,3:9:23.96:260,24,0	0/1:19,2:24:90.43:305,0,90	0/1:22,2:27:81.25:291,0,81	1/1:13,2:15:29.74:254,30,0	1/1:10,1:11:29.99:308,30,0	1/1:10,3:12:30.04:308,30,0	1/1:16,2:18:48.10:553,48,0	1/1:9,3:11:33.05:368,33,0	1/1:11,3:14:42.12:500,42,0	1/1:7,0:7:20.59:187,21,0	1/1:20,0:19:57.02:582,57,0	1/1:16,0:16:44.98:458,45,0	1/1:11,0:11:33.08:354,33,0	1/1:23,7:29:72.19:789,72,0	1/1:9,4:13:32.90:339,33,0	1/1:7,2:9:27:295,27,0	1/1:5,1:6:18.05:211,18,0	1/1:7,4:11:30.05:356,30,0	1/1:4,1:5:12.03:124,12,0	1/1:7,1:8:23.80:241,24,0	1/1:9,1:10:30.06:317,30,0	1/1:10,0:10:30.06:313,30,0	1/1:8,3:11:12.29:97,12,0	1/1:13,6:19:51.14:581,51,0	1/1:10,0:10:29.09:294,29,0	1/1:10,2:13:36.05:381,36,0	1/1:1,0:1:3.01:34,3,0
chr10	69536579	.	T	TC	7169.30	PASS	AB=0.769;AC=54;AF=0.964;AN=56;BaseQRankSum=3.018;DP=367;FS=32.945;HRun=1;HaplotypeScore=162.7707;InbreedingCoeff=-0.0441;MQ=92.49;MQ0=0;MQRankSum=-5.861;QD=19.53;ReadPosRankSum=5.954;VQSLOD=2.7104;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:5,11:16:35.18:339,35,0	1/1:3,6:9:21.66:182,22,0	0/1:16,7:23:73.47:209,0,73	0/1:19,8:27:5.61:297,0,6	1/1:3,12:15:26.95:231,27,0	1/1:1,10:11:29.77:261,30,0	1/1:5,7:11:22.84:200,23,0	1/1:5,12:17:38.53:374,39,0	1/1:3,9:11:29.46:233,29,0	1/1:5,10:15:33.02:308,33,0	1/1:0,7:7:20.97:186,21,0	1/1:0,20:19:56.59:492,57,0	1/1:0,16:16:45.03:412,45,0	1/1:1,10:11:29.36:266,29,0	1/1:7,23:29:70.86:632,71,0	1/1:4,9:13:28.86:267,29,0	1/1:5,4:9:18.43:152,18,0	1/1:1,5:6:15.02:146,15,0	1/1:5,6:11:20.52:200,21,0	1/1:2,3:5:12.01:108,12,0	1/1:1,7:8:20.30:169,20,0	1/1:1,9:10:26.89:235,27,0	1/1:2,8:10:23.58:218,24,0	1/1:5,6:11:8.62:83,9,0	1/1:6,13:19:45.35:390,45,0	1/1:0,10:10:29.78:258,30,0	1/1:3,10:13:34.12:291,34,0	1/1:0,1:1:3.01:30,3,0
chr10	69536714	.	A	AG	6587.77	PASS	AC=46;AF=1.000;AN=46;DP=200;FS=0.000;HRun=1;HaplotypeScore=125.9001;InbreedingCoeff=-0.0517;MQ=28.99;MQ0=0;QD=33.10;VQSLOD=4.3887;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,1:2:3.01:45,3,0	1/1:0,6:6:18.06:268,18,0	./.	./.	1/1:1,15:16:24.03:359,24,0	1/1:0,3:3:9.03:135,9,0	1/1:0,6:6:15.03:224,15,0	1/1:0,5:5:12.04:180,12,0	1/1:0,4:3:6.02:90,6,0	1/1:1,16:17:48.16:718,48,0	1/1:0,22:22:45.11:672,45,0	1/1:1,3:3:6.02:90,6,0	1/1:1,3:4:9.03:134,9,0	1/1:0,5:5:12.04:179,12,0	1/1:2,5:6:6.02:88,6,0	1/1:2,4:6:12.04:179,12,0	1/1:0,1:1:3.01:45,3,0	./.	./.	1/1:0,19:19:51.17:763,51,0	1/1:0,2:2:6.02:90,6,0	1/1:1,18:19:42.05:602,42,0	1/1:1,10:11:24.01:334,24,0	./.	1/1:0,18:18:48.08:668,48,0	1/1:4,7:11:27.05:371,27,0	1/1:3,7:10:21.07:309,21,0	1/1:0,1:1:3.01:45,3,0
chr10	69536851	.	CCCTT	C	347.19	PASS	AB=0.881;AC=10;AF=0.179;AN=56;BaseQRankSum=3.311;DP=399;FS=14.722;HRun=0;HaplotypeScore=76.8309;InbreedingCoeff=0.1394;MQ=71.54;MQ0=7;MQRankSum=-2.357;QD=8.07;ReadPosRankSum=-4.849;VQSLOD=-0.7423;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:13,0:13:54.42:54,0,131	0/0:7,0:7:21.07:0,21,552	0/0:39,0:26:75.13:0,75,1615	0/0:36,0:24:32.91:0,33,904	0/1:4,0:4:26.92:27,0,30	0/0:17,0:17:51.18:0,51,1331	0/0:25,0:25:75.23:0,75,1902	0/1:6,5:11:99:99,0,110	0/0:21,0:21:63.22:0,63,1509	0/0:19,0:19:50.96:0,51,1169	0/0:7,0:7:18.51:0,19,426	0/0:23,0:23:66.14:0,66,1670	0/0:24,0:24:63.21:0,63,1576	0/0:25,0:25:75.26:0,75,1940	0/0:32,0:32:87.30:0,87,2240	0/0:30,0:30:83.96:0,84,2146	0/1:3,1:4:51.36:51,0,69	0/0:2,0:2:3.01:0,3,49	0/0:4,0:1:0:0,0,0	1/1:3,0:3:6.02:82,6,0	0/0:4,0:4:2.99:0,3,23	0/0:16,0:16:42.14:0,42,1019	0/0:7,0:7:2.98:0,3,22	0/0:4,1:5:1.08:0,1,3	0/0:13,0:13:39.10:0,39,831	0/1:2,0:2:51.61:52,0,74	0/1:3,1:4:54.72:102,0,55	1/1:2,0:1:2.94:18,3,0
chr10	69536855	.	T	TCCCTCC	1458.33	PASS	AB=0.917;AC=20;AF=0.385;AN=52;BaseQRankSum=2.705;DP=431;FS=32.900;HRun=0;HaplotypeScore=98.7692;InbreedingCoeff=0.7575;MQ=71.23;MQ0=7;MQRankSum=-3.396;QD=18.94;ReadPosRankSum=-4.047;VQSLOD=0.5278;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,14:22:18.06:515,18,0	0/0:8,0:8:21.07:0,21,461	0/0:40,0:28:49.51:0,50,1205	0/0:36,0:24:19.42:0,19,425	1/1:1,5:7:12:227,12,0	0/0:17,0:17:48.16:0,48,1045	0/0:25,0:25:72.25:0,72,1556	1/1:11,0:11:11.99:222,12,0	0/0:22,0:22:63.21:0,63,1292	0/0:20,0:20:51.10:0,51,947	0/0:7,0:7:18.03:0,18,352	0/0:25,0:25:63.21:0,63,1343	0/0:24,0:24:66.23:0,66,1378	0/0:25,0:25:69.24:0,69,1487	0/0:35,0:35:78.27:0,78,1680	0/0:32,0:32:78.26:0,78,1712	1/1:4,0:4:5.98:99,6,0	1/1:0,3:3:3.01:102,3,0	0/1:4,0:2:0:0,0,0	1/1:5,0:5:12.01:132,12,0	./.	0/0:18,0:18:48.16:0,48,944	1/1:0,6:8:3.01:102,3,0	1/1:2,4:7:3.01:101,3,0	0/0:13,0:13:36.09:0,36,652	0/1:2,0:2:51.61:52,0,60	1/1:3,0:3:8.59:89,9,0	./.
chr10	69538181	.	A	AT	4444.66	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-11.107;DP=684;FS=5.021;HRun=6;HaplotypeScore=64.6513;InbreedingCoeff=0.9579;MQ=65.61;MQ0=0;MQRankSum=-1.959;QD=29.05;ReadPosRankSum=0.671;VQSLOD=5.5851;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,108,1101	0/0:9,0:9:21.05:0,21,214	0/0:20,0:20:13.91:0,14,342	0/0:20,0:20:22.46:0,22,358	0/0:26,0:26:66.13:0,66,666	0/0:24,0:24:60.13:0,60,611	0/0:24,0:24:69.15:0,69,703	0/0:29,0:29:59.93:0,60,598	0/0:24,0:24:72.16:0,72,734	0/0:26,0:26:72.16:0,72,730	0/0:17,0:17:48.08:0,48,480	0/0:26,0:26:78.17:0,78,793	0/0:30,0:30:78.16:0,78,788	0/0:21,0:21:57.13:0,57,581	0/0:31,0:31:87.14:0,87,864	0/0:31,0:31:90.19:0,90,911	0/0:27,0:27:69.12:0,69,695	0/0:29,0:29:78.15:0,78,786	1/1:3,25:28:75.24:943,75,0	1/1:1,20:21:57.15:696,57,0	1/1:5,19:24:51.16:641,51,0	0/0:13,0:13:39.09:0,39,397	0/0:9,0:9:24.04:0,24,237	0/0:29,0:29:81.11:0,81,801	0/0:23,1:24:60.12:0,60,610	1/1:7,29:36:59.62:1033,60,0	1/1:4,39:43:87.28:1095,87,0	1/1:0,1:1:3.01:38,3,0
chr10	69538986	.	C	CTGTGTGTGTGTG	3107.42	PASS	AB=0.951;AC=13;AF=0.241;AN=54;BaseQRankSum=8.472;DP=615;FS=16.536;HRun=0;HaplotypeScore=200.4448;InbreedingCoeff=0.2116;MQ=49.36;MQ0=22;MQRankSum=-8.986;QD=16.80;ReadPosRankSum=-1.938;VQSLOD=1.3475;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:25:19.13:19,0,49	0/0:12,0:12:27.08:0,27,861	0/0:4,0:3:9.03:0,9,259	0/0:11,0:10:23.04:0,23,565	./.	0/0:28,0:26:63.06:0,63,1629	0/0:27,0:26:59.90:0,60,1556	1/1:32,0:24:33.67:958,34,0	0/0:31,0:30:75.14:0,75,2050	0/0:36,0:35:90.18:0,90,2417	0/0:13,0:13:29.56:0,30,638	0/0:30,0:30:84.27:0,84,2687	0/0:37,0:37:99:0,105,3197	0/0:36,0:35:81.22:0,81,2171	0/0:40,0:40:99:0,105,2996	0/0:36,0:36:99:0,102,3102	0/1:28,0:27:99:226,0,203	0/1:10,0:10:23.75:216,0,24	0/1:11,0:6:33.93:333,0,34	1/1:11,0:10:3.01:98,3,0	0/0:7,1:6:0.47:0,0,1	0/0:27,0:27:57.14:0,57,1560	0/1:20,0:18:15.09:37,0,15	0/0:24,0:23:8.98:0,9,89	0/0:12,0:11:24.06:0,24,665	0/1:11,8:23:99:957,0,116	1/1:11,1:11:6.44:281,6,0	0/1:6,0:4:25.84:139,0,26
chr10	69538988	.	G	GTGTGTCTGTC	1917.25	PASS	AB=0.932;AC=13;AF=0.241;AN=54;BaseQRankSum=8.768;DP=623;FS=6.752;HRun=0;HaplotypeScore=184.4749;InbreedingCoeff=0.2355;MQ=50.91;MQ0=20;MQRankSum=-8.739;QD=10.53;ReadPosRankSum=-0.221;VQSLOD=1.8606;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:14,10:30:49.82:79,0,50	0/0:12,0:12:27.08:0,27,737	0/0:6,0:5:8.37:0,8,261	0/0:11,0:10:23.83:0,24,542	./.	0/0:27,0:26:64.23:0,64,1371	0/0:24,0:24:62.90:0,63,1194	1/1:31,0:21:28:265,28,0	0/0:30,0:29:78.24:0,78,1709	0/0:37,0:36:89.05:0,89,1857	0/0:12,0:12:29.48:0,29,535	0/0:29,0:29:84.27:0,84,2190	0/0:40,0:40:99:0,105,2711	0/0:34,0:34:81.01:0,81,1714	0/0:41,0:41:99:0,111,2581	0/0:36,0:36:99:0,102,2677	0/1:26,3:26:99:495,0,101	0/1:9,0:9:22.87:272,0,23	0/1:11,0:6:9.56:156,0,10	0/1:10,0:9:16.88:46,0,17	0/0:8,0:5:0.47:0,0,1	0/0:27,0:27:57.09:0,57,1319	1/1:20,0:19:4.25:113,4,0	0/0:12,11:30:5.94:0,6,42	0/0:12,0:11:24.08:0,24,591	0/1:21,0:21:52.82:424,0,53	1/1:11,0:10:5.96:163,6,0	0/1:6,0:4:10:63,0,10
chr10	69539001	.	T	TGTGTGTGTGTGT	2027.86	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=10.237;DP=670;FS=19.847;HRun=0;HaplotypeScore=215.6491;InbreedingCoeff=0.6280;MQ=54.06;MQ0=14;MQRankSum=-8.504;QD=13.52;ReadPosRankSum=-0.884;VQSLOD=0.7722;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:31:16.31:0,16,320	0/0:13,0:13:33.10:0,33,1015	0/0:18,0:14:7.80:0,8,663	0/0:21,0:20:48.13:0,48,1284	0/0:26,0:26:8.98:0,9,72	0/0:24,0:23:65.85:0,66,1856	0/0:25,0:25:56.92:0,57,1607	0/1:36,0:27:99:159,0,317	0/0:31,0:30:72.20:0,72,2295	0/0:40,0:39:99:0,102,2959	0/0:10,0:10:24.08:0,24,809	0/0:31,0:31:87.28:0,87,2777	0/0:40,0:40:99:0,117,3635	0/0:36,0:35:86.63:0,87,2395	0/0:45,0:45:99:0,116,3569	0/0:36,0:36:99:0,102,3420	0/1:26,0:24:81.73:82,0,286	0/1:14,0:14:6.55:7,0,206	1/1:8,0:4:12.04:233,12,0	1/1:12,0:11:15.03:293,15,0	1/1:11,0:8:2.24:19,2,0	0/0:28,0:28:66.13:0,66,2003	0/0:21,0:19:22.82:0,23,390	0/0:28,0:27:6.44:0,6,45	0/0:14,0:13:25.78:0,26,946	1/1:17,0:17:39.12:986,39,0	1/1:4,15:22:12.46:333,12,0	1/1:3,0:3:5.98:94,6,0
chr10	69540496	.	GGAGGGA	G	149.83	PASS	AB=0.579;AC=1;AF=0.018;AN=56;BaseQRankSum=3.046;DP=192;FS=3.758;HRun=0;HaplotypeScore=41.3997;InbreedingCoeff=0.0473;MQ=72.95;MQ0=8;MQRankSum=1.896;QD=13.62;ReadPosRankSum=-0.192;VQSLOD=1.6343;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:30.03:0,30,597	0/0:3,0:3:9.01:0,9,96	0/0:17,0:11:5.03:0,5,59	0/0:10,0:6:11.72:0,12,161	0/0:10,0:10:21.04:0,21,326	0/0:2,0:1:3.01:0,3,100	0/0:8,0:8:18.03:0,18,452	0/1:3,8:11:5.65:224,0,6	0/0:5,0:4:12.04:0,12,360	0/0:5,0:4:12.04:0,12,324	0/0:2,0:2:3.01:0,3,99	0/0:10,0:10:24:0,24,613	0/0:3,0:2:6.02:0,6,150	0/0:9,0:8:10.71:0,11,118	0/0:6,0:6:18.05:0,18,388	0/0:7,0:7:15.01:0,15,277	0/0:4,0:4:12.02:0,12,325	0/0:5,0:4:8.99:0,9,99	0/0:3,0:3:5.93:0,6,47	0/0:6,0:6:14.99:0,15,127	0/0:12,0:12:18:0,18,278	0/0:9,0:9:24:0,24,581	0/0:5,0:5:15.05:0,15,403	0/0:6,0:6:15:0,15,201	0/0:3,0:3:8.98:0,9,220	0/0:5,0:4:12.04:0,12,384	0/0:5,0:5:12.03:0,12,143	0/0:4,0:3:3.01:0,3,76
chr10	69541369	.	ACATGTGTG	A	6560.80	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=14.438;DP=788;FS=10.846;HRun=0;HaplotypeScore=216.5545;InbreedingCoeff=0.9333;MQ=60.28;MQ0=1;MQRankSum=-12.740;QD=51.26;ReadPosRankSum=-1.011;VQSLOD=3.2155;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:46:99:0,120,5019	0/0:7,0:7:15.05:0,15,588	0/0:16,0:11:0.25:0,0,410	0/0:18,0:17:30.57:0,31,648	0/0:28,0:28:66.23:0,66,2748	0/0:30,0:30:81.24:0,81,3163	0/0:22,0:22:60.21:0,60,2460	0/0:63,0:63:99:0,150,5723	0/0:47,0:47:99:0,135,5528	0/0:52,0:52:99:0,147,6117	0/0:23,0:23:54.17:0,54,2177	0/0:34,0:34:93.31:0,93,3560	0/0:39,0:39:99:0,111,4019	0/0:37,0:37:99:0,102,3933	0/0:32,0:32:78.25:0,78,3057	0/0:29,0:29:81.28:0,81,3249	0/0:33,0:33:96.33:0,96,3818	0/0:24,0:24:66.23:0,66,2737	1/1:1,13:14:39:819,39,0	1/1:3,22:25:57.20:1539,57,0	1/1:11,4:15:9.03:201,9,0	0/0:17,0:17:39.12:0,39,1521	0/0:22,0:22:60.19:0,60,2434	0/0:25,0:25:60.12:0,60,2432	0/0:15,0:15:42.13:0,42,1635	1/1:2,32:34:84.25:2060,84,0	1/1:8,22:30:54.19:1455,54,0	1/1:2,8:10:18.06:486,18,0
chr10	69541546	.	C	CT	4844.54	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-5.305;DP=631;FS=5.099;HRun=12;HaplotypeScore=77.7148;InbreedingCoeff=0.9363;MQ=59.94;MQ0=11;MQRankSum=-2.362;QD=15.43;ReadPosRankSum=-1.391;VQSLOD=5.2788;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:10,23:31:47.45:551,47,0	0/0:18,0:16:43.75:0,44,308	0/0:12,0:8:14.85:0,15,103	0/0:9,0:8:2.01:0,2,36	1/1:9,25:33:43.34:551,43,0	0/0:35,1:36:49.13:0,49,503	0/0:17,0:17:38.76:0,39,284	1/1:20,25:44:54.91:495,55,0	0/0:17,1:18:9.58:0,10,233	0/0:46,0:44:99:0,101,733	0/0:24,0:24:40.68:0,41,287	0/0:21,0:20:32.93:0,33,282	0/0:19,0:19:46.72:0,47,334	0/0:15,0:15:31.63:0,32,215	0/0:20,0:20:47.50:0,48,341	0/0:14,0:15:31.53:0,32,197	1/1:12,13:24:34.23:362,34,0	1/1:11,17:26:38.80:362,39,0	1/1:6,19:25:41.11:539,41,0	1/1:6,20:26:37.67:546,38,0	1/1:4,7:9:20.98:195,21,0	0/0:13,0:13:23.81:0,24,175	1/1:9,5:14:3.19:158,3,0	1/1:4,7:9:15.02:146,15,0	0/0:29,1:30:41.80:0,42,473	1/1:10,14:22:36.01:340,36,0	1/1:6,17:24:32.87:300,33,0	1/1:2,11:12:32.42:300,32,0
chr10	69541878	.	G	GC	232.16	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-4.360;DP=689;FS=0.000;HRun=7;HaplotypeScore=93.3115;InbreedingCoeff=0.9977;MQ=84.74;MQ0=0;MQRankSum=-0.455;QD=25.80;ReadPosRankSum=-0.115;VQSLOD=3.6226;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:49:99:0,128,1216	1/1:0,9:9:27.08:326,27,0	0/0:22,0:22:60.09:0,60,576	0/0:23,0:23:47.88:0,48,434	0/0:32,0:32:81.09:0,81,775	0/0:14,0:14:36.05:0,36,348	0/0:31,0:31:90.14:0,90,869	0/0:31,0:31:62.74:0,63,581	0/0:25,0:25:57.07:0,57,545	0/0:21,0:21:60.10:0,60,579	0/0:17,0:17:48.08:0,48,463	0/0:28,0:28:81.13:0,81,782	0/0:17,0:17:45.07:0,45,435	0/0:32,0:31:81.13:0,81,782	0/0:22,0:22:66.09:0,66,632	0/0:29,0:29:81.13:0,81,782	0/0:28,0:28:69.10:0,69,666	0/0:29,0:29:75.03:0,75,715	0/0:23,0:23:48.03:0,48,455	0/0:16,0:16:45.07:0,45,434	0/0:32,0:32:90.11:0,90,861	0/0:15,0:15:39.06:0,39,377	0/0:20,0:20:60.08:0,60,574	0/0:39,0:39:99:0,102,979	0/0:24,0:24:60.09:0,60,579	0/0:24,0:23:63.09:0,63,603	0/0:26,0:26:66.10:0,66,636	0/0:11,0:11:27.01:0,27,248
chr10	69542761	.	T	TA	4468.97	PASS	AB=1.000;AC=15;AF=0.268;AN=56;BaseQRankSum=-12.181;DP=668;FS=2.989;HRun=10;HaplotypeScore=66.6362;InbreedingCoeff=0.8752;MQ=73.52;MQ0=0;MQRankSum=1.501;QD=20.79;ReadPosRankSum=-2.233;VQSLOD=5.1004;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:2,26:29:72.05:750,72,0	0/0:11,0:11:32.96:0,33,271	0/1:14,0:14:28.68:29,0,72	0/0:12,0:10:2.23:0,2,60	1/1:10,31:42:22.12:813,22,0	0/0:18,0:18:44.94:0,45,369	0/0:17,0:18:40.99:0,41,326	1/1:11,24:35:69.13:712,69,0	0/0:16,0:16:44.93:0,45,367	0/0:27,0:30:75.96:0,76,599	0/0:29,0:30:82.81:0,83,653	0/0:24,0:24:62.89:0,63,511	0/0:27,0:27:74.89:0,75,612	0/0:15,0:17:25.12:0,25,286	0/0:29,0:29:80.78:0,81,656	0/0:28,0:28:74.78:0,75,594	1/1:5,29:34:75.19:800,75,0	1/1:2,20:22:48.12:512,48,0	0/0:20,0:21:52.89:0,53,411	0/0:30,0:32:91.52:0,92,713	0/0:12,0:14:39.99:0,40,300	0/0:19,0:19:44.93:0,45,369	1/1:2,23:26:41.36:629,41,0	1/1:3,9:12:21.05:224,21,0	0/0:30,0:30:76.94:0,77,622	0/0:31,0:33:84.19:0,84,659	0/0:31,0:31:71.86:0,72,585	0/0:12,0:12:29.95:0,30,246
chr10	69546504	.	CT	C	874.94	PASS	AB=0.763;AC=22;AF=0.393;AN=56;BaseQRankSum=5.005;DP=512;FS=7.063;HRun=16;HaplotypeScore=91.0255;InbreedingCoeff=0.3744;MQ=69.38;MQ0=9;MQRankSum=1.147;QD=3.26;ReadPosRankSum=4.831;VQSLOD=0.2316;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,18:28:22.27:225,22,0	0/0:7,0:8:11.83:0,12,88	0/1:16,0:13:0.53:1,0,16	0/0:14,0:12:8.62:0,9,52	0/1:13,9:25:3.22:80,0,3	0/1:19,3:22:14.26:14,0,199	0/0:20,0:19:27.70:0,28,217	0/0:20,0:31:43.83:0,44,245	0/0:12,0:13:22.05:0,22,174	0/0:19,0:20:6.34:0,6,174	0/0:17,0:16:18.47:0,18,138	0/1:18,0:20:17.80:18,0,154	0/0:16,0:16:14.94:0,15,118	0/0:20,0:20:7.54:0,8,74	0/0:18,0:19:4.58:0,5,224	0/0:25,1:29:31.35:0,31,306	0/1:8,14:23:10.87:157,0,11	0/1:11,11:21:14.99:114,0,15	1/1:9,0:16:20.91:60,21,0	1/1:5,0:13:14.18:41,14,0	1/1:7,0:10:8.76:25,9,0	0/0:17,0:16:5.06:0,5,110	1/1:4,11:15:26.40:161,26,0	0/1:5,7:14:19.47:92,0,19	0/0:15,0:17:23.74:0,24,178	0/1:10,0:19:4.58:30,0,5	1/1:6,0:14:11.80:34,12,0	1/1:0,0:1:2.04:6,2,0
chr10	69553767	.	C	CT	5304.38	PASS	AB=0.882;AC=27;AF=0.482;AN=56;BaseQRankSum=-3.252;DP=709;FS=0.348;HRun=12;HaplotypeScore=90.9889;InbreedingCoeff=0.9004;MQ=70.50;MQ0=0;MQRankSum=-1.320;QD=14.73;ReadPosRankSum=-3.245;VQSLOD=4.2274;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,24:36:3.18:494,3,0	0/1:13,2:15:2.41:2,0,147	0/0:11,0:12:23.76:0,24,131	0/0:19,0:17:26.50:0,27,180	1/1:10,3:30:48.16:293,48,0	0/0:25,1:27:39.33:0,39,448	0/0:17,0:18:25.79:0,26,181	1/1:14,25:39:60.06:573,60,0	0/0:13,0:13:23.80:0,24,175	0/0:33,1:34:36.32:0,36,430	0/0:27,0:28:52.52:0,53,378	0/0:33,2:35:42.29:0,42,474	0/0:29,0:29:38.63:0,39,284	0/0:23,0:23:32.66:0,33,241	0/0:29,2:30:35.66:0,36,429	0/0:21,1:23:8.51:0,9,216	1/1:8,19:27:60.08:579,60,0	1/1:0,8:8:15.02:146,15,0	1/1:6,17:24:53.72:467,54,0	1/1:12,10:23:34.61:310,35,0	1/1:12,13:26:14.44:281,14,0	0/0:30,0:31:55.28:0,55,399	1/1:11,14:26:20.78:325,21,0	1/1:5,24:30:43.87:561,44,0	0/0:25,0:25:38.63:0,39,284	1/1:4,14:19:41.86:376,42,0	1/1:18,23:42:41.77:686,42,0	1/1:3,11:14:5.60:212,6,0
chr10	69554738	.	G	GA	2476.74	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-9.248;DP=674;FS=3.047;HRun=10;HaplotypeScore=66.4615;InbreedingCoeff=0.9570;MQ=61.75;MQ0=7;MQRankSum=-2.922;QD=17.57;ReadPosRankSum=0.760;VQSLOD=4.3468;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:35:98.75:0,99,793	0/0:11,0:11:29.92:0,30,239	0/0:10,0:8:19.49:0,19,133	0/0:6,0:4:11.36:0,11,73	0/0:31,0:30:74.46:0,74,608	0/0:22,0:21:56.42:0,56,437	0/0:29,0:27:43.16:0,43,451	0/0:29,0:29:44.33:0,44,513	0/0:20,0:20:48.80:0,49,390	0/0:28,1:29:24.89:0,25,409	0/0:20,0:20:47.72:0,48,379	0/0:20,1:22:26.97:0,27,412	0/0:20,0:19:41.90:0,42,342	0/0:24,0:24:47.87:0,48,389	0/0:30,0:30:71.73:0,72,579	0/0:23,0:23:59.91:0,60,492	0/0:28,0:29:67.92:0,68,548	0/0:24,0:24:56.89:0,57,468	1/1:10,9:19:5.27:245,5,0	1/1:4,19:23:57.04:575,57,0	1/1:8,27:38:25.43:633,25,0	0/0:27,0:27:50.85:0,51,415	0/0:19,1:20:17.93:0,18,334	0/0:35,1:36:66.84:0,67,748	0/0:32,0:32:71.87:0,72,587	1/1:3,19:21:54.02:528,54,0	1/1:5,16:21:11.45:327,11,0	1/1:3,12:17:35.79:349,36,0
chr10	69555478	.	TACACACACAC	T	32.91	PASS	AB=0.924;AC=6;AF=0.130;AN=46;BaseQRankSum=3.254;DP=537;FS=0.000;HRun=0;HaplotypeScore=146.6187;InbreedingCoeff=0.2263;MQ=51.57;MQ0=23;MQRankSum=-2.331;QD=0.39;ReadPosRankSum=-1.690;VQSLOD=2.1412;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:25:5.24:0,5,25	0/0:8,0:8:6.02:0,6,187	./.	./.	./.	0/0:26,0:24:33.11:0,33,1099	0/0:22,0:22:15.05:0,15,374	0/0:25,0:24:2.84:0,3,9	0/0:20,0:20:14.79:0,15,333	0/0:17,0:17:18.06:0,18,685	./.	0/0:30,0:28:18.06:0,18,567	0/0:16,0:16:20.90:0,21,653	0/0:24,0:22:24.08:0,24,934	0/0:14,0:16:12.04:0,12,395	0/0:10,0:10:11.84:0,12,345	0/1:21,0:22:0.71:1,0,68	1/1:13,7:19:0.24:83,0,0	./.	0/0:18,0:18:7.59:0,8,104	0/0:31,0:28:3.01:0,3,34	0/0:20,0:18:15.05:0,15,475	0/0:14,0:14:1.72:0,2,42	0/1:24,0:25:16.44:16,0,48	0/0:19,0:17:6.02:0,6,289	0/0:30,0:30:9:0,9,113	1/1:13,0:15:3:30,3,0	0/0:9,0:7:6:0,6,63
chr10	69557732	.	T	TG	51.08	PASS	AB=0.667;AC=1;AF=0.018;AN=56;BaseQRankSum=5.395;DP=688;FS=2.551;HRun=0;HaplotypeScore=74.9035;InbreedingCoeff=-0.0217;MQ=67.73;MQ0=2;MQRankSum=-4.054;QD=8.51;ReadPosRankSum=-0.733;VQSLOD=3.5089;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:98.67:0,99,1420	0/0:11,0:11:33.11:0,33,461	0/0:27,0:26:58.03:0,58,848	0/0:36,0:30:59:0,59,961	0/0:16,0:16:42.14:0,42,587	0/0:18,0:18:51.16:0,51,697	0/0:18,0:19:36.14:0,36,692	0/0:33,0:33:90.25:0,90,1209	0/0:26,0:26:78.24:0,78,1057	0/0:22,0:22:63.18:0,63,848	0/0:12,0:12:36.12:0,36,503	0/0:20,0:20:60.20:0,60,828	0/0:31,0:31:93.30:0,93,1281	0/0:27,0:27:81.27:0,81,1132	0/0:28,0:28:84.28:0,84,1165	0/0:36,0:36:99:0,108,1493	0/0:35,0:35:99:0,102,1426	0/0:17,1:18:6.34:0,6,534	0/0:16,0:16:48.14:0,48,652	0/0:24,0:24:72.23:0,72,985	0/0:21,0:21:44.01:0,44,780	0/0:19,0:19:54.16:0,54,737	0/0:20,1:21:57.18:0,57,779	0/0:42,0:42:69.51:0,70,1506	0/0:28,0:28:81.27:0,81,1132	0/0:33,0:33:99:0,99,1383	0/0:26,0:26:75.23:0,75,1025	0/1:3,3:6:99:126,0,108
chr10	69558670	.	GAAACAAAC	G	6032.45	PASS	AB=0.718;AC=24;AF=0.429;AN=56;BaseQRankSum=7.204;DP=494;FS=0.486;HRun=0;HaplotypeScore=130.7085;InbreedingCoeff=0.7897;MQ=64.69;MQ0=5;MQRankSum=-8.535;QD=26.46;ReadPosRankSum=3.330;VQSLOD=3.9163;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,13:28:20.11:498,20,0	0/0:7,0:7:21.07:0,21,835	0/0:27,0:15:5.98:0,6,65	0/0:21,0:16:18.06:0,18,428	1/1:10,15:24:36:743,36,0	0/0:22,0:22:36.12:0,36,1451	0/0:18,0:18:33.10:0,33,1162	0/1:15,0:20:2.71:3,0,278	0/0:11,0:11:30.10:0,30,1181	0/0:21,0:21:30.10:0,30,1135	0/0:23,0:25:57.18:0,57,2138	0/0:8,0:18:30.10:0,30,1012	0/0:19,0:18:30.10:0,30,1175	0/0:11,0:14:15.03:0,15,461	0/0:14,0:14:18.04:0,18,642	0/0:10,0:10:12.04:0,12,493	0/1:9,11:21:34.74:431,0,35	1/1:6,0:11:6.02:112,6,0	1/1:12,6:17:12.14:374,12,0	1/1:6,15:21:42.05:930,42,0	1/1:4,0:4:5.98:96,6,0	0/0:9,0:22:48.15:0,48,1500	1/1:8,14:22:35.92:798,36,0	1/1:3,1:5:6.02:132,6,0	0/0:17,0:17:33.10:0,33,1214	1/1:5,15:20:45.08:875,45,0	1/1:9,18:27:36.12:910,36,0	1/1:3,1:5:6.02:132,6,0
chr10	69558853	.	C	CTT	3470.98	PASS	AB=0.732;AC=23;AF=0.411;AN=56;BaseQRankSum=4.072;DP=523;FS=3.476;HRun=10;HaplotypeScore=70.2508;InbreedingCoeff=0.7242;MQ=73.83;MQ0=0;MQRankSum=-1.587;QD=13.00;ReadPosRankSum=0.965;VQSLOD=1.7258;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:13,1:35:38.60:173,0,39	0/0:12,0:13:11.66:0,12,174	0/0:14,0:13:20.45:0,20,191	0/1:15,0:14:14.56:15,0,77	1/1:3,1:25:45.78:205,46,0	0/0:24,0:24:60.10:0,60,610	0/0:21,0:21:39.02:0,39,397	0/0:26,0:28:53.09:0,53,581	0/0:18,0:18:48.10:0,48,488	0/0:13,0:13:21.47:0,21,211	0/0:15,0:15:4.17:0,4,249	0/0:14,0:14:36.05:0,36,360	0/0:11,0:11:23.99:0,24,244	0/0:17,0:17:51.11:0,51,519	0/0:16,0:16:45.08:0,45,458	0/0:10,0:12:35.56:0,36,329	1/1:3,1:27:53.39:232,53,0	0/1:2,1:7:14.51:64,0,15	1/1:4,7:11:18.06:268,18,0	1/1:7,16:23:45.04:588,45,0	1/1:3,19:23:39.13:565,39,0	0/0:17,0:18:40.05:0,40,381	1/1:1,1:14:16.43:112,16,0	1/1:5,0:32:11.04:168,11,0	0/0:19,0:20:50.73:0,51,483	1/1:4,13:17:5.52:373,6,0	1/1:7,20:27:41.57:575,42,0	1/1:7,4:11:9.03:135,9,0
chr10	69559938	.	CGTGTGT	C	1354.82	PASS	AB=0.807;AC=22;AF=0.423;AN=52;BaseQRankSum=6.330;DP=579;FS=0.000;HRun=0;HaplotypeScore=147.6437;InbreedingCoeff=0.5943;MQ=60.84;MQ0=7;MQRankSum=-3.010;QD=5.02;ReadPosRankSum=2.855;VQSLOD=2.1795;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:23,1:25:10.54:52,0,11	0/0:10,0:10:14.99:0,15,193	./.	./.	0/1:18,9:28:2.28:27,0,2	0/0:16,0:20:24.06:0,24,580	0/0:9,0:12:12.01:0,12,185	0/0:25,0:24:25.79:0,26,168	0/1:16,1:17:19.16:19,0,619	0/0:28,0:27:8.80:0,9,463	0/0:16,0:15:27.06:0,27,656	0/0:14,0:22:39.85:0,40,787	0/0:18,0:22:29.98:0,30,394	0/0:12,0:15:17.20:0,17,371	0/0:21,0:22:31.46:0,31,862	0/0:18,0:17:16.08:0,16,825	1/1:12,12:23:14.69:203,15,0	1/1:10,0:11:14.84:119,15,0	1/1:10,0:10:2.99:42,3,0	0/1:11,0:28:11.97:75,0,12	1/1:31,0:31:2.29:19,2,0	0/0:18,0:18:17.08:0,17,429	1/1:10,9:19:3.01:61,3,0	1/1:23,4:29:29.39:430,29,0	0/0:11,0:17:24.03:0,24,417	1/1:15,0:20:15.44:171,15,0	1/1:6,0:18:20.21:292,20,0	1/1:8,0:8:5.65:31,6,0
chr10	69562388	.	AG	A	2043.28	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=9.580;DP=597;FS=0.390;HRun=10;HaplotypeScore=71.5317;InbreedingCoeff=0.9658;MQ=75.58;MQ0=0;MQRankSum=-2.718;QD=13.81;ReadPosRankSum=-0.839;VQSLOD=3.5443;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,1:34:43.10:0,43,684	0/0:10,0:10:26.72:0,27,260	0/0:17,0:14:29.90:0,30,257	0/0:25,0:24:41.74:0,42,403	0/0:26,0:26:64.19:0,64,670	0/0:21,2:23:22.08:0,22,472	0/0:23,1:24:29.26:0,29,516	1/1:5,0:39:60.80:179,61,0	0/0:30,0:30:72.11:0,72,748	0/0:21,0:21:48.13:0,48,531	0/0:16,0:15:32.94:0,33,332	0/0:21,0:21:48.13:0,48,527	0/0:22,0:22:54.11:0,54,571	0/0:22,1:23:28.06:0,28,513	0/0:17,0:17:36.07:0,36,382	0/0:20,1:21:28.86:0,29,530	0/0:32,2:34:38.13:0,38,869	0/0:14,0:14:39.11:0,39,430	1/1:4,19:23:62.43:520,62,0	1/1:4,11:15:29.87:245,30,0	1/1:7,25:32:68.98:599,69,0	0/0:19,1:20:16.06:0,16,397	0/0:13,1:14:10.02:0,10,323	0/0:19,0:19:48.11:0,48,521	0/0:17,1:18:15.69:0,16,362	1/1:3,16:19:44.95:383,45,0	1/1:5,12:17:29.99:260,30,0	1/1:0,3:3:6:52,6,0
chr10	69562634	.	TGC	T	1863.15	PASS	AB=0.955;AC=18;AF=0.321;AN=56;BaseQRankSum=2.601;DP=479;FS=2.089;HRun=0;HaplotypeScore=74.5778;InbreedingCoeff=0.2196;MQ=69.75;MQ0=11;MQRankSum=-1.126;QD=8.87;ReadPosRankSum=-0.357;VQSLOD=3.2142;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:22,0:22:22.45:281,0,22	0/0:7,0:7:17.96:0,18,214	0/0:29,0:21:46.75:0,47,410	0/0:31,0:22:39.28:0,39,391	0/1:15,0:14:30.66:117,0,31	0/0:24,0:24:57.36:0,57,679	0/0:15,0:15:44.75:0,45,403	1/1:10,0:10:16.20:203,16,0	0/0:16,0:16:29.35:0,29,465	0/0:25,0:25:73.59:0,74,642	0/0:11,0:11:26.87:0,27,233	0/0:24,0:24:47.96:0,48,585	0/0:14,0:14:26.25:0,26,435	0/0:16,0:16:44.79:0,45,565	0/1:18,0:17:0.17:0,0,190	0/0:21,0:20:53.85:0,54,671	0/1:17,0:16:50.22:191,0,50	0/1:19,0:19:34.52:230,0,35	1/1:10,0:10:17.40:147,17,0	0/1:12,0:12:15.12:109,0,15	1/1:19,0:17:13.62:104,14,0	0/0:17,0:17:30.72:0,31,315	1/1:11,1:12:29.67:319,30,0	0/1:4,19:23:30.05:117,0,30	0/0:19,0:19:50.11:0,50,642	0/1:13,0:13:20.72:149,0,21	0/1:16,0:16:52.35:64,0,52	0/1:4,0:4:8.65:12,0,9
chr10	69562635	.	G	GCACA	587.94	PASS	AB=0.922;AC=17;AF=0.304;AN=56;BaseQRankSum=4.453;DP=480;FS=0.000;HRun=0;HaplotypeScore=103.0130;InbreedingCoeff=0.2918;MQ=68.63;MQ0=11;MQRankSum=-0.986;QD=3.54;ReadPosRankSum=-2.800;VQSLOD=0.6420;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:21,0:21:19.71:105,0,20	0/0:8,0:8:18:0,18,271	0/0:27,0:19:54.05:0,54,852	0/0:30,0:21:53.24:0,53,822	0/1:15,0:14:46.26:71,0,46	0/0:23,0:23:57.64:0,58,910	0/0:17,0:16:41.99:0,42,566	1/1:9,0:9:5.27:35,5,0	0/0:19,0:19:42.13:0,42,698	0/0:26,0:26:75.04:0,75,1145	0/0:11,0:11:27.09:0,27,433	0/0:22,0:22:60.19:0,60,968	0/0:15,0:15:39.09:0,39,629	0/0:17,0:17:40.95:0,41,670	0/0:18,0:17:48.15:0,48,758	0/0:19,0:18:54.05:0,54,840	0/1:17,0:16:9.47:9,0,115	0/1:17,0:19:12.98:50,0,13	1/1:9,0:9:8.82:78,9,0	1/1:12,0:12:2.73:98,3,0	1/1:18,0:16:4.06:65,4,0	0/0:19,0:19:44.65:0,45,661	0/1:12,0:12:14.72:15,0,81	0/0:21,0:22:15:0,15,155	0/0:21,0:21:48.16:0,48,874	0/1:11,0:13:40.92:105,0,41	0/1:9,7:17:58.96:59,0,83	1/1:4,0:4:6:67,6,0
chr10	69562637	.	GCA	G	209.14	PASS	AB=0.989;AC=10;AF=0.200;AN=50;BaseQRankSum=0.548;DP=520;FS=0.000;HRun=0;HaplotypeScore=87.1202;InbreedingCoeff=0.1538;MQ=65.61;MQ0=12;MQRankSum=-1.210;QD=1.46;ReadPosRankSum=0.514;VQSLOD=1.0484;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:18.03:0,18,219	0/1:9,0:9:9.22:9,0,138	./.	./.	0/0:19,0:18:32.99:0,33,326	0/0:22,0:22:27.04:0,27,337	0/1:19,0:18:12.39:12,0,67	./.	0/0:19,3:22:0.68:0,1,320	0/0:27,0:29:20.92:0,21,195	0/0:12,0:12:3.01:0,3,44	0/1:22,0:22:8.18:8,0,246	0/1:13,1:14:8.18:8,0,262	0/0:16,0:16:27.08:0,27,376	1/1:14,2:17:17.71:157,18,0	0/0:17,0:17:30.05:0,30,397	0/0:16,0:15:18.02:0,18,231	0/0:22,0:22:21.01:0,21,237	0/0:10,0:10:8.97:0,9,72	0/0:15,0:15:12.02:0,12,138	0/0:20,0:18:2.99:0,3,27	0/1:22,0:22:34.72:35,0,57	1/1:12,0:12:11.50:76,11,0	0/1:27,0:26:43.98:44,0,54	0/0:22,0:24:8.64:0,9,450	0/0:17,0:17:20.58:0,21,193	0/0:18,0:18:21:0,21,245	0/0:5,0:5:6.01:0,6,64
chr10	69563154	.	CA	C	11493.51	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=16.718;DP=672;FS=7.703;HRun=1;HaplotypeScore=82.5319;InbreedingCoeff=0.9851;MQ=82.75;MQ0=0;MQRankSum=-9.165;QD=35.04;ReadPosRankSum=2.564;VQSLOD=4.6884;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,36:36:90.30:1253,90,0	0/0:10,0:10:30.07:0,30,431	0/0:18,0:18:53.49:0,53,689	0/0:27,0:27:69.56:0,70,968	1/1:0,23:23:59.94:769,60,0	0/0:17,0:17:51.15:0,51,768	0/0:29,0:29:87.19:0,87,1222	1/1:0,26:26:69.20:944,69,0	0/0:29,0:29:87.22:0,87,1309	0/0:24,0:24:72.19:0,72,1065	0/0:15,0:15:45.10:0,45,626	0/0:26,0:26:78.26:0,78,1220	0/0:32,0:32:96.31:0,96,1502	0/0:31,0:31:93.27:0,93,1411	0/0:27,0:27:81.24:0,81,1245	0/0:25,0:25:75.22:0,75,1149	1/1:0,32:32:69.23:961,69,0	1/1:0,17:17:45.15:626,45,0	1/1:0,15:15:45.14:609,45,0	1/1:0,17:17:45.14:611,45,0	1/1:0,36:36:87.29:1211,87,0	0/0:21,0:21:63.18:0,63,957	1/1:0,21:21:54.18:746,54,0	1/1:0,33:33:78.26:1087,78,0	0/0:13,0:13:36.12:0,36,570	1/1:2,28:30:22.39:1094,22,0	1/1:0,40:40:99:1498,108,0	1/1:0,2:2:6.02:84,6,0
chr10	69563416	.	TA	T	13140.72	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=13.396;DP=618;FS=2.492;HRun=1;HaplotypeScore=62.2277;InbreedingCoeff=0.9986;MQ=80.06;MQ0=0;MQRankSum=-2.845;QD=38.99;ReadPosRankSum=0.561;VQSLOD=5.4048;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,38:38:99:1468,105,0	0/0:14,0:14:42.13:0,42,631	0/0:19,0:19:48.84:0,49,775	0/0:20,0:20:19.63:0,20,593	1/1:0,44:44:99:1728,126,0	0/0:18,0:18:54.15:0,54,796	0/0:24,0:24:72.20:0,72,1061	1/1:0,32:32:96.31:1316,96,0	0/0:26,0:26:78.27:0,78,1218	0/0:20,0:20:54.18:0,54,845	0/0:20,0:20:57.18:0,57,868	0/0:15,0:15:45.14:0,45,680	0/0:22,0:22:66.19:0,66,987	0/0:17,0:17:48.16:0,48,751	0/0:16,0:16:48.14:0,48,707	0/0:12,0:12:36.12:0,36,561	1/1:0,38:38:99:1384,99,0	1/1:0,16:16:39.13:545,39,0	1/1:0,20:20:60.20:837,60,0	1/1:0,22:22:63.07:792,63,0	1/1:0,14:14:33.11:461,33,0	0/0:16,0:16:48.16:0,48,746	1/1:0,18:18:54.18:745,54,0	1/1:1,26:27:75.25:1049,75,0	0/0:22,0:22:66.20:0,66,1007	1/1:0,28:28:84.25:1139,84,0	1/1:0,33:33:99:1384,99,0	1/1:0,7:7:21.07:293,21,0
chr10	69565356	.	AC	A	3860.31	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=4.187;DP=598;FS=19.759;HRun=9;HaplotypeScore=69.1944;InbreedingCoeff=0.9922;MQ=81.68;MQ0=0;MQRankSum=-3.018;QD=23.68;ReadPosRankSum=3.787;VQSLOD=2.4819;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,37:40:99:1043,114,0	0/0:14,0:14:36.05:0,36,392	0/0:24,0:23:32.03:0,32,410	0/0:15,0:13:22.24:0,22,193	1/1:2,22:24:59.96:539,60,0	0/0:18,0:18:42.09:0,42,463	0/0:30,0:30:75.18:0,75,842	0/0:28,0:28:33.06:0,33,351	0/0:13,0:13:33.10:0,33,381	0/0:20,0:20:60.17:0,60,684	0/0:18,0:18:45.11:0,45,507	0/0:18,0:18:54.16:0,54,623	0/0:26,0:26:75.21:0,75,856	0/0:22,0:23:69.13:0,69,769	0/0:12,0:12:36.09:0,36,405	0/0:14,0:14:36.09:0,36,406	1/1:1,21:22:60.03:549,60,0	1/1:3,29:32:78.03:714,78,0	0/0:6,0:14:31.72:0,32,205	0/0:6,0:16:28.83:0,29,164	0/0:4,0:21:28.54:0,29,151	0/0:27,0:27:78.20:0,78,871	1/1:3,16:19:39.01:357,39,0	1/1:1,25:26:72.04:659,72,0	0/0:23,0:23:54.16:0,54,623	0/0:4,0:18:42.93:0,43,240	0/0:7,0:31:65.37:0,65,332	0/0:4,0:11:11.83:0,12,59
chr10	69566427	.	C	CT	6909.72	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=14.154;DP=609;FS=6.884;HRun=7;HaplotypeScore=83.1356;InbreedingCoeff=0.9783;MQ=74.57;MQ0=0;MQRankSum=-5.878;QD=28.79;ReadPosRankSum=2.013;VQSLOD=5.3796;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:5,22:27:69.19:810,69,0	0/0:7,0:7:21.03:0,21,199	0/0:19,0:19:12.20:0,12,266	0/0:15,0:16:7.83:0,8,94	1/1:5,21:26:63.15:745,63,0	0/0:33,0:33:93.10:0,93,888	0/0:21,0:21:63.09:0,63,603	0/0:41,0:41:96.13:0,96,921	0/0:29,0:29:81.11:0,81,775	0/0:24,0:24:66.09:0,66,632	0/0:28,0:28:75.10:0,75,719	0/0:23,0:23:69.06:0,69,656	0/0:19,0:19:57.02:0,57,529	0/0:21,0:21:57.09:0,57,550	0/0:21,0:21:54.07:0,54,516	0/0:16,0:16:45.07:0,45,435	1/1:3,16:19:48.14:569,48,0	1/1:6,14:20:48.11:563,48,0	1/1:0,16:16:48.15:580,48,0	1/1:7,23:30:63.19:761,63,0	1/1:3,8:11:15.05:181,15,0	0/0:23,0:23:63.09:0,63,603	1/1:5,14:19:39.05:453,39,0	1/1:2,14:16:39.12:471,39,0	0/0:28,0:28:72.08:0,72,689	1/1:5,18:23:60.17:715,60,0	1/1:5,23:28:78.24:941,78,0	1/1:1,4:5:11.83:121,12,0
chr10	69566437	.	C	CT	7287	PASS	AB=1.000;AC=25;AF=0.446;AN=56;BaseQRankSum=13.458;DP=616;FS=1.006;HRun=8;HaplotypeScore=87.3806;InbreedingCoeff=0.9245;MQ=69.56;MQ0=0;MQRankSum=-4.634;QD=27.92;ReadPosRankSum=-0.570;VQSLOD=4.7402;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,24:27:75.22:865,75,0	0/0:7,0:7:21.01:0,21,192	0/0:22,0:21:20.96:0,21,318	0/1:12,0:12:9.98:10,0,100	1/1:5,24:29:75.21:854,75,0	0/0:32,0:34:91.10:0,91,804	0/0:19,0:19:54.03:0,54,494	0/0:42,0:42:99:0,99,900	0/0:25,0:25:69.02:0,69,626	0/0:23,0:23:66.03:0,66,604	0/0:25,0:25:63.02:0,63,577	0/0:26,0:26:60.01:0,60,543	0/0:22,0:22:60.03:0,60,549	0/0:23,0:23:66.04:0,66,603	0/0:18,0:18:48.03:0,48,439	0/0:17,0:17:39:0,39,353	1/1:3,18:21:45.13:519,45,0	1/1:4,15:19:48.14:554,48,0	1/1:5,12:17:11.65:386,12,0	1/1:3,29:32:62.76:950,63,0	1/1:1,9:10:21.06:239,21,0	0/0:21,0:21:57.02:0,57,522	1/1:2,18:20:60.17:684,60,0	1/1:6,10:16:17.62:433,18,0	0/0:31,0:31:90.05:0,90,824	1/1:4,20:24:63.19:723,63,0	1/1:2,26:28:78.23:897,78,0	1/1:1,5:6:15.04:173,15,0
chr10	69566895	.	GTGTGT	G	2219.96	PASS	AB=0.656;AC=19;AF=0.339;AN=56;BaseQRankSum=10.813;DP=696;FS=26.472;HRun=0;HaplotypeScore=143.0804;InbreedingCoeff=0.4652;MQ=47.53;MQ0=39;MQRankSum=-3.014;QD=8.31;ReadPosRankSum=-1.403;VQSLOD=1.2082;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:15,26:35:3.78:17,0,4	0/0:9,0:9:27.09:0,27,747	0/0:60,0:14:39.12:0,39,717	0/0:65,0:20:48.07:0,48,826	0/0:4,20:23:4.37:0,4,64	0/0:22,0:22:52.38:0,52,1233	0/0:19,0:19:45.63:0,46,1139	1/1:27,0:27:13.84:347,14,0	0/0:18,0:18:48.63:0,49,1093	0/0:26,0:26:72.24:0,72,1653	0/0:19,0:19:50.76:0,51,1312	0/0:24,0:24:66.22:0,66,1596	0/0:26,0:26:54.18:0,54,1304	0/0:25,0:25:63.22:0,63,1657	0/0:24,0:24:60.20:0,60,1580	0/0:22,0:22:54.61:0,55,1278	1/1:8,9:15:8.20:140,8,0	0/1:7,5:9:49.88:160,0,50	0/1:14,9:21:67.53:480,0,68	1/1:13,20:30:3.20:43,3,0	1/1:14,11:20:6.69:82,7,0	0/0:32,0:32:96.26:0,96,2457	1/1:4,22:24:1.99:22,2,0	1/1:14,10:21:6.82:52,7,0	0/0:13,0:13:36.11:0,36,802	0/1:8,15:23:35.31:709,0,35	0/1:6,8:14:32.92:282,0,33	1/1:1,1:1:3.01:62,3,0
chr10	69566900	.	T	TTG	2135.31	PASS	AB=0.766;AC=22;AF=0.393;AN=56;BaseQRankSum=4.067;DP=685;FS=21.009;HRun=0;HaplotypeScore=119.9412;InbreedingCoeff=0.7464;MQ=46.58;MQ0=41;MQRankSum=-6.692;QD=8.09;ReadPosRankSum=-2.082;VQSLOD=1.6502;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:29,11:34:5.69:62,6,0	0/0:9,0:9:24.08:0,24,300	0/0:63,0:14:33.10:0,33,392	0/0:62,0:17:33.10:0,33,400	0/0:24,1:23:2.74:0,3,37	0/0:20,0:21:42.08:0,42,506	0/0:18,0:18:44.93:0,45,559	1/1:12,14:27:42.97:605,43,0	0/0:17,0:17:38.91:0,39,481	0/0:27,0:27:51.06:0,51,572	0/0:20,0:20:51:0,51,599	0/0:24,0:24:54.16:0,54,662	0/0:23,0:23:54.15:0,54,658	0/0:24,0:24:54.16:0,54,653	0/0:21,0:21:57.17:0,57,699	0/0:20,0:20:47.84:0,48,564	1/1:13,2:13:11.56:124,12,0	0/1:9,3:10:16.13:100,0,16	1/1:16,4:21:40.95:402,41,0	1/1:22,6:28:6.02:100,6,0	1/1:16,7:20:11.91:165,12,0	0/0:34,0:34:84.06:0,84,1024	1/1:27,1:28:3.01:50,3,0	0/1:16,6:20:3.58:90,0,4	0/0:13,0:13:24.08:0,24,299	1/1:18,5:23:9.19:382,9,0	1/1:9,4:13:20.59:241,21,0	1/1:2,0:1:2.84:14,3,0
chr10	69566929	.	TGAGAGA	T	366.92	PASS	AB=0.937;AC=12;AF=0.261;AN=46;BaseQRankSum=3.554;DP=556;FS=56.848;HRun=0;HaplotypeScore=144.1049;InbreedingCoeff=-0.0215;MQ=45.81;MQ0=32;MQRankSum=0.297;QD=1.65;ReadPosRankSum=-1.331;VQSLOD=0.3850;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:44,1:38:26.77:144,0,27	0/0:12,0:12:0.94:0,1,2	./.	./.	0/0:22,0:22:1.95:0,2,36	0/1:17,1:18:57.45:57,0,145	./.	0/0:20,0:20:8.01:0,8,70	0/1:23,0:23:21.35:21,0,748	0/1:16,5:20:30.67:166,0,31	0/1:18,0:19:1.39:1,0,36	0/0:20,0:20:21.06:0,21,472	0/1:20,0:21:30.30:30,0,482	0/1:22,0:22:3.67:4,0,42	0/0:20,0:22:12.04:0,12,329	0/0:21,1:21:21.54:0,22,594	0/1:13,0:13:3.61:4,0,19	1/1:13,0:9:1.25:3,1,0	0/0:22,0:21:11.99:0,12,171	0/0:25,0:25:0.94:0,1,1	0/0:19,0:17:6.02:0,6,151	0/0:25,0:25:9.02:0,9,159	./.	1/1:20,1:18:2.33:54,2,0	./.	0/0:18,0:17:13.23:0,13,164	0/0:18,0:19:21.06:0,21,370	0/0:3,0:3:2.44:0,2,6
chr10	69569510	.	TCTTC	T	4088.72	PASS	AB=0.787;AC=22;AF=0.423;AN=52;BaseQRankSum=12.728;DP=811;FS=8.957;HRun=0;HaplotypeScore=140.9501;InbreedingCoeff=0.6421;MQ=62.81;MQ0=3;MQRankSum=-3.996;QD=11.17;ReadPosRankSum=1.003;VQSLOD=2.4961;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:15,16:31:36.12:555,36,0	0/0:18,0:18:27.09:0,27,614	./.	./.	1/1:13,10:23:30.29:353,30,0	0/1:19,1:20:22.13:22,0,422	0/0:20,0:20:2.19:0,2,209	0/0:39,0:39:8.93:0,9,63	0/0:39,0:39:45.12:0,45,1004	0/0:26,1:27:11.39:0,11,918	0/0:14,0:14:27.08:0,27,573	0/1:30,3:33:1.07:1,0,853	0/0:37,0:37:54.18:0,54,1177	0/0:34,1:35:13.99:0,14,1230	0/0:42,0:42:60.18:0,60,1288	0/0:40,1:41:16.98:0,17,1267	1/1:17,17:34:33.11:504,33,0	1/1:12,12:23:8.05:366,8,0	1/1:13,0:19:12.48:113,12,0	0/1:10,0:24:6.72:192,0,7	0/0:23,0:37:2.36:0,2,8	0/0:28,0:28:42.13:0,42,897	1/1:23,7:30:14.97:222,15,0	1/1:22,33:55:72.20:1083,72,0	0/0:36,0:37:23.72:0,24,1097	0/1:15,0:33:99:118,0,121	1/1:14,0:31:42.05:391,42,0	1/1:3,0:9:18.02:168,18,0
chr10	69570170	.	A	AAT	1223.07	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-7.492;DP=559;FS=2.584;HRun=0;HaplotypeScore=65.0267;InbreedingCoeff=0.9794;MQ=83.58;MQ0=0;MQRankSum=-2.213;QD=43.68;ReadPosRankSum=-2.765;VQSLOD=4.3106;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:40,0:40:93.29:0,93,1195	0/0:15,0:15:36.12:0,36,468	0/0:21,0:21:42.10:0,42,506	0/0:17,0:17:36.06:0,36,429	0/0:31,0:31:81.22:0,81,1011	0/0:24,0:24:66.20:0,66,844	0/0:24,0:24:63.20:0,63,819	1/1:2,26:28:78.27:1318,78,0	0/0:20,0:20:57.17:0,57,725	0/0:19,0:18:54.17:0,54,692	0/0:16,0:16:39.13:0,39,507	0/0:22,0:22:63.20:0,63,819	0/0:24,0:24:66.21:0,66,847	0/0:18,0:18:48.16:0,48,624	0/0:14,0:14:36.11:0,36,456	0/0:8,0:8:21.07:0,21,273	0/0:23,0:23:63.19:0,63,805	0/0:14,0:14:30.10:0,30,390	0/0:16,0:16:33.11:0,33,429	0/0:23,0:23:66.16:0,66,824	0/0:21,0:21:54.16:0,54,686	0/0:20,0:20:60.16:0,60,742	0/0:15,0:15:45.13:0,45,559	0/0:16,0:16:42.14:0,42,546	0/0:25,0:25:69.19:0,69,859	0/0:19,0:19:54.14:0,54,650	0/0:21,0:21:57.17:0,57,727	0/0:5,0:5:15.05:0,15,195
chr10	69570804	.	GCACC	G	9281.75	PASS	AB=0.556;AC=23;AF=0.411;AN=56;BaseQRankSum=17.431;DP=632;FS=0.337;HRun=0;HaplotypeScore=141.3377;InbreedingCoeff=0.8987;MQ=82.01;MQ0=0;MQRankSum=-15.167;QD=40.01;ReadPosRankSum=-0.433;VQSLOD=4.8272;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,33:33:72.25:1435,72,0	0/0:13,0:13:39.13:0,39,1035	0/0:20,0:20:57.18:0,57,1452	0/0:21,0:22:42.84:0,43,1146	1/1:0,23:23:30.10:543,30,0	0/0:26,0:26:78.25:0,78,2121	0/0:27,0:27:81.26:0,81,2177	0/0:31,0:31:93.32:0,93,2558	0/0:27,0:27:81.28:0,81,2253	0/0:18,0:18:54.19:0,54,1510	0/0:14,0:14:42.14:0,42,1175	0/0:26,0:26:78.27:0,78,2162	0/0:28,0:28:84.29:0,84,2335	0/0:29,0:29:87.30:0,87,2431	0/0:39,0:39:99:0,117,3166	0/0:31,0:31:90.31:0,90,2479	1/1:0,19:19:42.14:838,42,0	1/1:0,6:6:18.06:359,18,0	1/1:0,12:12:36.11:685,36,0	1/1:0,20:20:36.12:663,36,0	1/1:1,12:13:21.07:380,21,0	0/0:24,0:24:72.25:0,72,1970	1/1:0,16:16:21.07:418,21,0	1/1:1,25:26:45.14:892,45,0	0/0:25,0:25:75.26:0,75,2059	0/1:6,24:30:99:1295,0,254	1/1:1,32:33:87.30:1714,87,0	1/1:0,1:1:3.01:60,3,0
chr10	69571154	.	AT	A	5430.73	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=15.274;DP=516;FS=4.717;HRun=10;HaplotypeScore=75.6041;InbreedingCoeff=0.9704;MQ=64.64;MQ0=0;MQRankSum=-5.818;QD=21.21;ReadPosRankSum=-0.970;VQSLOD=5.4646;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,14:16:38.99:338,39,0	0/0:12,0:12:33.06:0,33,353	0/0:5,0:5:12.03:0,12,134	0/0:15,0:13:13.19:0,13,173	1/1:6,22:28:62.95:543,63,0	0/0:22,0:22:60.16:0,60,664	0/0:25,0:25:69.17:0,69,754	1/1:7,35:42:99:881,102,0	0/0:21,0:21:54.14:0,54,588	0/0:16,1:17:45.11:0,45,490	0/0:21,0:21:51.14:0,51,564	0/0:10,0:10:30.08:0,30,331	0/0:14,0:14:39.11:0,39,431	0/0:25,0:25:69.17:0,69,754	0/0:17,2:19:22.08:0,22,472	0/0:20,0:20:51.41:0,51,586	1/1:2,15:16:44.97:385,45,0	1/1:5,6:10:17.96:151,18,0	1/1:4,22:26:71.98:622,72,0	1/1:2,19:21:56.99:494,57,0	1/1:1,7:8:21:182,21,0	0/0:11,0:11:33.08:0,33,357	1/1:4,18:23:62:521,62,0	1/1:4,8:12:29.99:260,30,0	0/0:23,0:23:34.12:0,34,591	1/1:4,21:25:5.63:506,6,0	1/1:5,17:22:50.96:442,51,0	1/1:1,4:5:12:104,12,0
chr10	69571199	.	AT	A	5487.32	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=14.653;DP=505;FS=6.684;HRun=7;HaplotypeScore=72.2061;InbreedingCoeff=0.9971;MQ=83.09;MQ0=0;MQRankSum=-9.552;QD=26.26;ReadPosRankSum=-0.405;VQSLOD=5.2723;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,21:21:60.14:612,60,0	0/0:12,0:12:36.12:0,36,453	0/0:19,0:19:20.57:0,21,505	0/0:18,0:19:26.67:0,27,464	1/1:4,21:25:60.13:611,60,0	0/0:25,0:25:63.20:0,63,792	0/0:21,0:21:57.18:0,57,717	0/0:32,0:32:81.26:0,81,1019	0/0:16,0:16:48.14:0,48,590	0/0:15,0:15:45.14:0,45,566	0/0:16,0:17:48.02:0,48,581	0/0:13,0:13:33.09:0,33,402	0/0:13,0:13:36.12:0,36,453	0/0:18,0:18:42.13:0,42,528	0/0:20,0:20:57.18:0,57,717	0/0:16,0:16:48.14:0,48,592	1/1:5,10:14:33.05:330,33,0	1/1:0,12:12:33.08:337,33,0	1/1:4,21:25:69.12:686,69,0	1/1:2,20:22:60.12:605,60,0	1/1:0,8:8:24.05:245,24,0	0/0:19,0:19:57.18:0,57,717	1/1:4,16:20:45.09:459,45,0	1/1:0,9:9:24.05:245,24,0	0/0:21,0:21:63.20:0,63,792	1/1:4,21:25:25.36:564,25,0	1/1:0,21:21:60.14:612,60,0	1/1:0,6:6:18.04:184,18,0
chr10	69571665	.	AT	A	5005.06	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=12.214;DP=442;FS=2.199;HRun=8;HaplotypeScore=45.5454;InbreedingCoeff=0.9802;MQ=76.52;MQ0=1;MQRankSum=-1.331;QD=23.39;ReadPosRankSum=2.916;VQSLOD=5.3801;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,28:31:78.12:752,78,0	0/0:4,0:4:12.04:0,12,145	0/0:10,0:9:14.07:0,14,167	0/0:18,0:15:17.57:0,18,156	1/1:2,24:26:60.08:578,60,0	0/0:22,0:22:63.18:0,63,750	0/0:12,0:12:36.10:0,36,423	0/0:27,0:27:72.21:0,72,849	0/0:14,0:14:39.11:0,39,458	0/0:17,0:17:42.13:0,42,506	0/0:17,0:17:45.13:0,45,532	0/0:9,0:9:24.06:0,24,278	0/0:18,0:18:48.13:0,48,566	0/0:10,0:10:27.06:0,27,301	0/0:13,0:13:33.09:0,33,383	0/0:14,0:14:33.09:0,33,388	1/1:1,21:22:57.09:550,57,0	1/1:3,16:19:29.28:415,29,0	1/1:3,16:19:48.03:451,48,0	1/1:3,18:21:48.07:463,48,0	1/1:1,6:7:18.03:174,18,0	0/0:4,0:4:12.03:0,12,134	1/1:1,14:15:38.93:377,39,0	1/1:1,9:10:18.03:174,18,0	0/0:19,0:19:51.11:0,51,581	1/1:3,20:23:60.09:579,60,0	1/1:1,16:17:39.06:377,39,0	1/1:0,4:4:12.02:116,12,0
chr10	69574048	.	A	AGTGT	3138.30	PASS	AB=0.832;AC=23;AF=0.442;AN=52;BaseQRankSum=-0.225;DP=650;FS=9.600;HRun=0;HaplotypeScore=135.0376;InbreedingCoeff=0.5486;MQ=64.65;MQ0=15;MQRankSum=0.319;QD=9.15;ReadPosRankSum=-1.280;VQSLOD=2.3503;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:36,10:49:54.64:555,0,55	0/0:8,0:7:12.04:0,12,185	./.	./.	1/1:16,0:18:11.78:200,12,0	0/1:18,0:27:46.89:47,0,92	0/0:28,0:30:16.61:0,17,428	0/0:30,0:32:8.86:0,9,84	0/1:18,0:19:2.65:3,0,241	0/0:14,0:18:17.58:0,18,223	0/0:10,0:11:2.56:0,3,155	0/0:23,0:26:23.62:0,24,454	0/0:20,0:20:33.06:0,33,443	0/0:20,0:21:30.02:0,30,395	0/0:25,0:24:36.12:0,36,557	0/0:23,0:27:34.85:0,35,658	0/1:19,7:26:16.20:349,0,16	1/1:15,0:16:19.86:285,20,0	1/1:16,3:17:12.47:192,12,0	1/1:22,4:29:25.35:350,25,0	0/1:29,2:34:21.96:93,0,22	0/0:9,0:19:24.03:0,24,224	1/1:14,1:18:11.73:227,12,0	1/1:16,4:30:14.79:293,15,0	0/0:18,0:21:19.17:0,19,319	1/1:20,4:29:29.77:483,30,0	1/1:14,3:17:9.50:210,10,0	1/1:4,0:3:5.05:44,5,0
chr10	69575649	.	T	TC	921.83	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-7.248;DP=719;FS=4.725;HRun=5;HaplotypeScore=74.3970;InbreedingCoeff=0.9815;MQ=84.38;MQ0=1;MQRankSum=-0.440;QD=28.81;ReadPosRankSum=-5.652;VQSLOD=1.1535;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,135,1441	0/0:11,0:11:27.06:0,27,289	0/0:24,0:24:53.29:0,53,523	0/0:23,0:22:51.07:0,51,524	0/0:30,0:30:78.14:0,78,816	0/0:15,0:15:42.11:0,42,450	0/0:23,0:23:63.16:0,63,676	1/1:4,28:32:84.20:1017,84,0	0/0:23,0:23:57.13:0,57,605	0/0:36,0:36:93.22:0,93,993	0/0:11,0:11:27.07:0,27,290	0/0:25,0:25:63.15:0,63,677	0/0:25,0:25:54.09:0,54,567	0/0:27,0:27:75.17:0,75,797	0/0:28,0:28:81.05:0,81,870	0/0:19,0:18:51.07:0,51,540	0/0:27,0:27:69.17:0,69,741	0/0:29,0:29:78.20:0,78,838	0/0:26,0:26:60.14:0,60,645	0/0:29,0:29:72.01:0,72,755	0/0:36,0:35:93.21:0,93,990	0/0:29,0:29:74.91:0,75,778	0/0:21,0:21:27.21:0,27,455	0/0:26,0:26:72.18:0,72,773	0/0:29,0:29:80.16:0,80,827	0/0:27,0:27:63.15:0,63,677	0/0:27,0:27:72.18:0,72,772	0/0:11,0:11:15.04:0,15,161
chr10	69576097	.	CTCTG	C	440.19	PASS	AB=0.903;AC=7;AF=0.125;AN=56;BaseQRankSum=4.446;DP=824;FS=0.000;HRun=0;HaplotypeScore=192.0593;InbreedingCoeff=0.3813;MQ=56.86;MQ0=10;MQRankSum=-2.399;QD=4.63;ReadPosRankSum=-0.851;VQSLOD=2.3674;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:23,1:24:59.37:99,0,59	0/0:9,0:9:27.08:0,27,588	0/0:40,0:26:78.05:0,78,1507	0/0:73,0:33:65.70:0,66,1249	0/0:17,5:22:9.14:0,9,77	0/0:33,0:33:90.20:0,90,2037	0/0:31,0:31:83.67:0,84,1844	0/0:39,0:38:99:0,111,2342	0/0:33,0:33:89.83:0,90,2215	0/0:26,0:26:78.27:0,78,1743	0/0:21,0:21:57.20:0,57,1416	0/0:28,0:28:84.26:0,84,1946	0/0:47,0:47:99:0,132,3007	0/0:32,0:32:87.28:0,87,2233	0/0:40,0:40:99:0,120,2903	0/0:28,0:28:47.04:0,47,1847	0/1:13,1:14:17.04:17,0,18	1/1:14,0:14:6.62:287,7,0	0/0:10,0:8:20.65:0,21,141	0/0:29,0:29:62.78:0,63,797	0/0:66,0:66:99:0,151,1862	0/0:34,0:34:99:0,99,2328	0/1:17,5:22:23.70:115,0,24	1/1:18,3:21:2.88:47,3,0	0/0:22,0:21:63.22:0,63,1480	0/0:37,0:36:89.04:0,89,1220	0/0:20,0:20:27.37:0,27,365	0/0:9,0:9:23.03:0,23,381
chr10	69576111	.	GTCTGTCTGTCTC	G	285.47	PASS	AB=0.891;AC=5;AF=0.089;AN=56;BaseQRankSum=7.770;DP=816;FS=4.353;HRun=0;HaplotypeScore=302.5101;InbreedingCoeff=0.1845;MQ=54.80;MQ0=10;MQRankSum=-1.589;QD=3.07;ReadPosRankSum=-3.452;VQSLOD=1.7279;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:26,1:27:50.99:51,0,60	0/0:10,0:10:30.10:0,30,1144	0/0:36,0:23:60.09:0,60,1679	0/0:58,0:28:52.60:0,53,1479	1/1:15,5:20:4.31:44,4,0	0/0:31,0:31:83.95:0,84,3561	0/0:26,0:26:69.24:0,69,2367	0/0:40,0:39:99:0,105,2743	0/0:35,0:35:95.69:0,96,4197	0/0:29,0:29:78.23:0,78,2686	0/0:23,0:23:66.18:0,66,2323	0/0:27,0:27:75.23:0,75,2913	0/0:41,0:41:99:0,104,4473	0/0:33,0:33:84.29:0,84,4345	0/0:42,0:42:99:0,117,5020	0/0:24,0:24:66.22:0,66,3228	0/0:17,1:18:18.87:0,19,109	0/0:10,0:10:0.43:0,0,113	0/0:14,0:13:9.16:0,9,505	0/0:28,0:28:37.67:0,38,668	0/0:74,0:74:99:0,119,3097	0/0:34,0:34:89.64:0,90,3508	0/1:19,5:24:64.25:276,0,64	0/1:19,3:22:27.19:27,0,30	0/0:25,0:24:63.15:0,63,2305	0/0:33,0:33:6.38:0,6,1642	0/0:19,0:19:26.37:0,26,717	0/0:10,0:10:30.06:0,30,793
chr10	69576119	.	GTCTC	G	6319	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=14.179;DP=812;FS=20.493;HRun=0;HaplotypeScore=167.1036;InbreedingCoeff=0.9881;MQ=53.08;MQ0=10;MQRankSum=2.017;QD=21.28;ReadPosRankSum=1.933;VQSLOD=3.3993;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,10:23:27.44:438,27,0	0/0:12,0:12:36.07:0,36,748	0/0:43,0:22:48.13:0,48,1068	0/0:56,0:28:50.60:0,51,735	1/1:6,11:17:14.84:233,15,0	0/0:33,0:33:87.14:0,87,1777	0/0:25,0:25:54.16:0,54,1247	0/0:45,0:44:99:0,111,1787	0/0:35,0:36:86.57:0,87,1891	0/0:26,0:26:59.75:0,60,1057	0/0:23,0:23:60.06:0,60,1231	0/0:28,0:28:80.98:0,81,1681	0/0:36,0:36:77.60:0,78,1886	0/0:34,0:34:87.22:0,87,1938	0/0:42,0:42:96.24:0,96,2108	0/0:28,0:28:68.65:0,69,1573	1/1:11,5:16:24.30:323,24,0	1/1:6,3:9:17.85:189,18,0	1/1:3,15:17:39.75:556,40,0	1/1:2,23:25:29.94:489,30,0	1/1:18,62:80:99:1816,111,0	0/0:30,0:30:78.67:0,79,1854	1/1:9,11:20:27.02:389,27,0	1/1:14,10:24:14.86:151,15,0	0/0:18,0:18:51.09:0,51,1126	1/1:3,33:36:16.20:1154,16,0	1/1:4,14:18:21.05:338,21,0	1/1:7,4:11:13.43:243,13,0
chr10	69576201	.	ATG	A	8556.50	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=15.719;DP=797;FS=0.000;HRun=0;HaplotypeScore=147.9187;InbreedingCoeff=0.9328;MQ=57.00;MQ0=12;MQRankSum=-5.381;QD=24.66;ReadPosRankSum=0.373;VQSLOD=5.5154;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,18:27:48.15:605,48,0	0/0:12,0:12:27.09:0,27,447	0/0:27,0:13:6.02:0,6,96	0/0:24,0:15:6.50:0,6,226	1/1:5,21:26:67.37:783,67,0	0/0:35,0:35:96.31:0,96,1571	0/0:45,0:45:99:0,111,1714	1/1:13,18:27:48.08:542,48,0	0/0:36,0:36:96.28:0,96,1548	0/0:34,0:34:81.23:0,81,1308	0/0:16,0:16:39.12:0,39,626	0/0:28,0:28:75.26:0,75,1244	0/0:26,0:26:75.26:0,75,1252	0/0:34,0:34:96.23:0,96,1568	0/0:42,0:42:99:0,120,1894	0/0:29,0:29:75.26:0,75,1251	1/1:11,15:26:25.14:498,25,0	1/1:9,11:20:39.04:458,39,0	1/1:10,6:14:0.03:179,0,0	1/1:10,18:28:72.19:870,72,0	1/1:20,43:60:99:1580,125,0	0/0:35,0:35:91.19:0,91,1501	1/1:2,17:19:51.16:631,51,0	1/1:10,19:28:55.18:605,55,0	0/0:27,0:27:69.22:0,69,1125	1/1:15,20:35:84.18:1007,84,0	1/1:5,11:16:40.93:491,41,0	1/1:1,9:10:12.90:309,13,0
chr10	69576243	.	TTG	T	3684.58	PASS	AB=0.655;AC=11;AF=0.196;AN=56;BaseQRankSum=12.982;DP=925;FS=4.073;HRun=0;HaplotypeScore=209.0622;InbreedingCoeff=0.8456;MQ=49.38;MQ0=26;MQRankSum=-3.979;QD=19.39;ReadPosRankSum=-0.266;VQSLOD=3.4245;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:13,21:33:48.04:579,48,0	0/0:10,0:10:30.10:0,30,495	0/0:30,0:2:5.69:0,6,62	0/0:43,0:11:30.35:0,30,338	1/1:8,27:35:33.68:574,34,0	0/0:31,1:31:39.63:0,40,1168	0/0:38,0:38:93.30:0,93,1503	0/0:49,0:44:99:0,102,1521	0/0:41,1:42:72.72:0,73,1700	0/0:36,0:36:96.31:0,96,1577	0/0:20,0:20:54.03:0,54,841	0/0:33,0:33:90.29:0,90,1484	0/0:38,0:38:99:0,108,1791	0/0:47,0:47:99:0,129,2089	0/0:43,0:42:99:0,111,1852	0/0:31,0:31:90.22:0,90,1405	1/1:15,20:34:57.54:783,58,0	0/1:9,10:19:13.79:390,0,14	0/0:25,0:20:42.12:0,42,649	0/0:27,0:27:38.94:0,39,1071	0/0:56,0:53:46.72:0,47,739	0/0:34,0:34:84.22:0,84,1297	1/1:7,22:29:66.12:807,66,0	1/1:19,19:36:6.51:552,7,0	0/0:31,0:31:84.29:0,84,1402	0/0:43,0:41:96.29:0,96,1488	0/0:19,0:19:51.14:0,51,802	0/0:8,0:8:18.06:0,18,266
chr10	69576257	.	A	ATG	3821.80	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=9.013;DP=918;FS=9.524;HRun=0;HaplotypeScore=214.2545;InbreedingCoeff=0.9098;MQ=49.12;MQ0=24;MQRankSum=-9.752;QD=22.61;ReadPosRankSum=-4.203;VQSLOD=1.7782;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:18.01:0,18,166	0/0:10,0:10:30.07:0,30,360	0/0:42,0:3:3.01:0,3,37	0/0:50,0:14:18.05:0,18,211	0/0:33,0:36:26.90:0,27,245	0/0:25,0:25:60.05:0,60,716	0/0:39,0:39:84.08:0,84,1013	0/0:53,0:48:99:0,99,1209	0/0:37,0:37:84.10:0,84,1019	0/0:40,0:40:93.29:0,93,1153	0/0:21,0:21:54.15:0,54,660	0/0:36,0:36:96.25:0,96,1182	0/0:41,0:41:90.20:0,90,1119	0/0:49,0:50:99:0,126,1561	0/0:38,0:38:99:0,99,1192	0/0:34,0:34:87.10:0,87,1046	0/0:29,0:31:51.48:0,51,591	0/0:13,0:15:28.66:0,29,264	1/1:17,7:19:33.07:497,33,0	1/1:7,25:32:66.04:784,66,0	1/1:32,12:40:8.84:375,9,0	0/0:33,0:33:87.23:0,87,1055	0/0:23,0:25:27:0,27,238	0/0:29,0:29:34.74:0,35,305	0/0:32,0:32:77.96:0,78,942	1/1:19,23:42:55.57:1285,56,0	1/1:7,13:20:48.14:677,48,0	1/1:2,4:6:2.53:204,3,0
chr10	69576273	.	A	ATG	5109.34	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=14.473;DP=903;FS=11.886;HRun=0;HaplotypeScore=225.6583;InbreedingCoeff=0.9367;MQ=48.80;MQ0=18;MQRankSum=-7.309;QD=15.03;ReadPosRankSum=0.886;VQSLOD=3.2648;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:28,2:28:21.07:268,21,0	0/0:11,0:11:29.42:0,29,324	0/0:46,0:5:2.96:0,3,19	0/0:45,0:12:23.19:0,23,222	1/1:36,1:37:30.09:359,30,0	0/0:26,0:25:58.17:0,58,741	0/0:32,0:31:81.26:0,81,1032	0/0:44,0:41:81.21:0,81,1020	0/0:35,0:35:76.21:0,76,958	0/0:38,0:38:93.28:0,93,1167	0/0:25,0:25:63.20:0,63,808	0/0:41,0:41:99:0,114,1416	0/0:37,0:37:99:0,100,1267	0/0:52,0:52:99:0,126,1556	0/0:36,0:36:86.95:0,87,1081	0/0:29,0:29:66.11:0,66,846	1/1:38,3:40:60.27:712,60,0	1/1:15,0:15:28.95:250,29,0	1/1:10,8:15:30.36:398,30,0	1/1:16,17:33:17.97:265,18,0	1/1:26,17:39:11.75:432,12,0	0/0:33,0:33:87.28:0,87,1116	1/1:25,1:26:30.10:391,30,0	1/1:33,1:33:38.69:417,39,0	0/0:32,0:32:68.97:0,69,855	1/1:24,16:39:1.69:950,2,0	1/1:6,12:18:27.05:417,27,0	1/1:0,5:5:15.05:252,15,0
chr10	69576313	.	GCA	G	1089.74	PASS	AB=0.877;AC=11;AF=0.196;AN=56;BaseQRankSum=10.099;DP=801;FS=83.402;HRun=0;HaplotypeScore=188.9103;InbreedingCoeff=-0.2411;MQ=47.09;MQ0=24;MQRankSum=-5.206;QD=4.18;ReadPosRankSum=-2.382;VQSLOD=-0.2317;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:26,3:28:2.25:2,0,303	0/0:8,0:8:24.08:0,24,441	0/0:43,0:6:18.06:0,18,328	0/0:53,2:10:30.10:0,30,583	0/1:29,2:31:62.18:62,0,307	0/0:24,1:22:66.21:0,66,1274	0/0:38,0:36:99:0,102,1981	0/0:35,0:34:67.02:0,67,1632	0/0:29,1:30:45.57:0,46,1420	0/0:23,1:24:69.12:0,69,1309	0/0:24,0:24:72.17:0,72,1345	0/0:32,0:32:77.19:0,77,1793	0/0:35,0:35:87.70:0,88,1720	0/0:37,0:37:99:0,105,2046	0/0:34,0:34:50.62:0,51,1660	0/0:18,0:18:44.78:0,45,855	0/1:28,8:36:99:155,0,712	0/1:9,5:14:99:162,0,189	0/1:14,2:16:95.04:95,0,324	0/1:21,1:22:25.04:25,0,154	0/1:38,6:42:99:172,0,498	0/0:38,0:37:99:0,105,2027	0/1:11,2:13:14.94:15,0,179	0/0:28,5:32:4.35:0,4,382	0/0:30,0:30:69.23:0,69,1325	0/1:30,4:34:99:322,0,1031	0/1:11,5:16:99:197,0,208	0/1:6,0:6:26.70:27,0,249
chr10	69582498	.	G	GA	4008.01	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-11.317;DP=626;FS=0.754;HRun=9;HaplotypeScore=57.3562;InbreedingCoeff=0.9882;MQ=74.36;MQ0=0;MQRankSum=-0.683;QD=28.63;ReadPosRankSum=1.877;VQSLOD=3.3467;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,26:29:72.03:777,72,0	0/0:11,0:11:29.98:0,30,257	0/0:12,0:12:15.03:0,15,146	0/0:10,0:10:21.87:0,22,183	1/1:2,25:28:54.91:790,55,0	0/0:28,0:28:71.96:0,72,625	0/0:17,0:17:44.97:0,45,386	0/0:25,0:25:71.95:0,72,616	0/0:30,0:30:83.98:0,84,729	0/0:21,0:21:50.96:0,51,443	0/0:18,0:18:41.97:0,42,364	0/0:30,0:30:80.98:0,81,703	0/0:27,0:27:74.97:0,75,651	0/0:20,0:20:56.96:0,57,489	0/0:29,0:29:77.94:0,78,673	0/0:23,0:23:56.96:0,57,492	1/1:1,13:15:41.95:446,42,0	1/1:2,20:22:63.17:692,63,0	0/0:24,0:24:62.97:0,63,547	0/0:27,0:27:68.97:0,69,599	0/0:12,0:12:20.97:0,21,182	0/0:35,0:35:74.47:0,74,802	1/1:2,23:26:66:705,66,0	1/1:1,19:20:54.15:597,54,0	0/0:22,2:24:29.80:0,30,486	0/0:17,1:18:11.74:0,12,324	0/0:36,0:36:68.59:0,69,755	0/0:9,0:9:26.99:0,27,234
chr10	69584137	.	T	TACACAC	1616.59	PASS	AB=1.000;AC=14;AF=0.280;AN=50;BaseQRankSum=0.989;DP=813;FS=0.526;HRun=0;HaplotypeScore=186.2809;InbreedingCoeff=0.5670;MQ=52.00;MQ0=26;MQRankSum=-1.692;QD=5.42;ReadPosRankSum=-1.511;VQSLOD=2.5260;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:34,0:32:17.99:240,18,0	0/0:6,0:5:8.99:0,9,117	./.	./.	0/0:13,20:37:0.75:0,1,2	0/0:19,0:19:39.12:0,39,731	0/0:39,0:40:63:0,63,1011	1/1:40,0:39:35.95:355,36,0	0/0:27,0:27:48.24:0,48,824	0/0:28,0:27:51.83:0,52,688	0/0:12,0:14:33.21:0,33,505	0/0:28,0:30:10.85:0,11,1092	0/0:26,0:27:49.34:0,49,778	0/0:25,0:25:34.59:0,35,757	0/0:30,0:30:59.30:0,59,1009	0/0:29,0:32:49.07:0,49,903	1/1:35,0:33:44.95:705,45,0	1/1:14,0:13:9.92:234,10,0	0/1:20,0:18:15.26:15,0,48	0/0:33,0:33:10.41:0,10,208	0/1:60,0:54:23.69:24,0,292	0/0:36,0:35:29.63:0,30,712	./.	1/1:31,3:33:18.01:197,18,0	0/0:22,0:22:23.15:0,23,580	0/1:27,0:26:8.55:9,0,141	0/1:30,0:29:10.37:10,0,284	0/0:9,0:8:16.29:0,16,210
chr10	69584165	.	GAC	G	553.52	PASS	AB=0.903;AC=8;AF=0.143;AN=56;BaseQRankSum=5.584;DP=789;FS=3.758;HRun=0;HaplotypeScore=137.6903;InbreedingCoeff=-0.0188;MQ=46.92;MQ0=28;MQRankSum=-0.696;QD=2.39;ReadPosRankSum=0.476;VQSLOD=2.4196;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:28:18.94:0,19,255	0/0:4,0:4:9.03:0,9,143	0/0:25,0:8:23.48:0,23,230	0/0:23,0:5:14.81:0,15,117	0/0:33,0:32:12.04:0,12,190	0/1:26,0:25:20.96:21,0,678	0/0:37,0:37:83.98:0,84,1263	0/0:42,0:38:80.42:0,80,1056	0/0:27,1:28:28.02:0,28,886	0/0:33,0:31:71.84:0,72,940	0/1:16,0:16:1.75:2,0,458	0/0:27,1:27:34.20:0,34,946	0/0:26,0:25:39.43:0,39,595	0/0:23,0:22:51.17:0,51,813	0/0:29,0:29:66.22:0,66,1044	0/0:28,1:29:54.75:0,55,764	0/0:37,0:35:42.50:0,42,618	0/0:12,0:11:18.05:0,18,249	0/1:21,4:21:0.21:140,0,0	0/1:28,6:34:10.02:10,0,35	0/1:58,7:59:14.23:90,0,14	0/0:29,0:28:41.86:0,42,797	0/0:30,0:30:6.02:0,6,92	0/0:37,0:35:20.24:0,20,281	0/0:20,1:21:51.17:0,51,811	0/1:20,9:27:43.07:318,0,43	0/1:21,5:24:34.53:94,0,35	0/1:10,0:9:2.91:3,0,35
chr10	69584203	.	TAC	T	333.99	PASS	AB=0.895;AC=10;AF=0.179;AN=56;BaseQRankSum=6.343;DP=697;FS=0.802;HRun=0;HaplotypeScore=117.8996;InbreedingCoeff=0.1039;MQ=42.50;MQ0=50;MQRankSum=-5.281;QD=1.77;ReadPosRankSum=-0.988;VQSLOD=1.9464;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:33:8.28:0,8,23	0/1:5,0:5:7.08:7,0,112	0/0:22,0:5:3.01:0,3,35	0/0:25,0:3:3.01:0,3,34	0/0:18,0:19:7.10:0,7,21	0/0:27,0:27:39.09:0,39,514	0/0:29,0:26:51.62:0,52,748	0/0:32,0:26:3.99:0,4,39	0/0:27,0:26:32.84:0,33,602	0/0:24,0:21:23.80:0,24,616	0/0:19,0:17:39.13:0,39,582	0/0:20,0:19:29.75:0,30,359	0/0:21,0:20:23.31:0,23,238	0/0:22,0:21:48.69:0,49,648	0/0:28,0:28:23.37:0,23,532	0/0:26,2:26:41.17:0,41,550	0/0:33,0:30:14.51:0,15,47	0/1:20,0:18:16.43:16,0,31	0/1:22,2:16:49.32:49,0,72	1/1:16,11:26:2.97:25,3,0	1/1:57,2:48:2.75:37,3,0	0/0:26,0:26:32.40:0,32,474	0/0:15,0:17:1.82:0,2,5	0/0:26,0:23:8.20:0,8,24	0/0:21,0:18:39.13:0,39,610	0/1:19,10:22:66.37:198,0,66	0/1:17,3:18:28.54:79,0,29	0/1:4,1:4:8.15:57,0,8
chr10	69584213	.	C	CAG	2266.19	PASS	AB=0.921;AC=14;AF=0.250;AN=56;BaseQRankSum=5.304;DP=717;FS=4.539;HRun=0;HaplotypeScore=128.1967;InbreedingCoeff=0.1110;MQ=42.23;MQ0=47;MQRankSum=-3.485;QD=6.53;ReadPosRankSum=2.331;VQSLOD=3.3526;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:42,2:36:0.60:236,1,0	0/0:8,0:8:15.55:0,16,174	0/0:15,0:2:3.01:0,3,46	0/0:17,0:1:3.01:0,3,46	0/1:20,0:20:8.76:210,0,9	0/0:27,0:27:39.79:0,40,573	0/0:30,0:27:62.86:0,63,862	0/1:12,23:29:84.08:566,0,84	0/0:28,0:27:58.98:0,59,757	0/0:25,0:22:62.78:0,63,791	0/0:19,0:17:48.12:0,48,664	0/0:20,0:19:39.04:0,39,495	0/0:20,0:18:35.50:0,35,373	0/0:24,0:23:63.08:0,63,824	0/0:26,0:26:57.04:0,57,698	0/0:25,0:23:54.12:0,54,709	0/1:35,3:36:31.82:677,0,32	0/1:18,3:19:59.53:348,0,60	0/1:25,0:18:29.03:29,0,186	0/0:28,0:27:10.14:0,10,66	0/1:61,0:51:2.05:2,0,37	0/0:24,0:24:46.23:0,46,593	1/1:15,4:18:2.99:58,3,0	1/1:24,5:26:2.28:275,2,0	0/0:24,0:21:47.94:0,48,662	0/1:30,0:23:1.10:1,0,183	0/1:24,0:23:2.29:2,0,134	0/0:10,0:9:18.89:0,19,148
chr10	69584217	.	CAG	C	1232.19	PASS	AB=0.997;AC=29;AF=0.518;AN=56;BaseQRankSum=9.901;DP=713;FS=34.742;HRun=0;HaplotypeScore=128.2432;InbreedingCoeff=0.1486;MQ=42.22;MQ0=46;MQRankSum=-3.349;QD=2.31;ReadPosRankSum=-2.119;VQSLOD=0.5001;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:43,4:39:19.04:78,19,0	0/1:9,0:9:46.26:46,0,64	0/0:15,0:2:2.96:0,3,19	0/0:17,0:1:2.97:0,3,20	1/1:16,4:20:14.39:63,14,0	0/0:26,0:26:33.89:0,34,232	0/0:32,0:29:39.57:0,40,449	0/1:34,0:29:99:116,0,103	0/1:27,1:27:23.35:23,0,350	0/1:25,0:22:14.64:15,0,398	0/0:19,0:17:44.40:0,44,364	0/1:18,0:17:7.73:8,0,224	0/1:20,0:18:1.73:2,0,120	0/0:21,0:20:20.93:0,21,408	0/1:25,0:25:14.90:15,0,296	0/0:25,0:23:4.13:0,4,415	1/1:31,7:36:46.53:266,47,0	1/1:21,1:20:10.86:144,11,0	0/1:24,0:18:44.31:44,0,114	1/1:25,0:24:8.54:59,9,0	1/1:57,0:47:5.51:27,6,0	0/1:24,0:24:33.25:33,0,295	1/1:18,2:19:2.37:8,2,0	1/1:26,4:26:19.53:67,20,0	0/0:25,0:22:34.35:0,34,432	0/1:33,0:26:2.94:213,0,3	0/1:24,0:22:19.16:98,0,19	1/1:10,0:9:8.78:87,9,0
chr10	69584219	.	GAC	G	984.01	PASS	AB=0.976;AC=28;AF=0.538;AN=52;BaseQRankSum=5.476;DP=712;FS=2.245;HRun=0;HaplotypeScore=131.9305;InbreedingCoeff=0.0317;MQ=41.97;MQ0=45;MQRankSum=-0.578;QD=1.87;ReadPosRankSum=-1.711;VQSLOD=2.3070;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:33,12:38:11.45:120,11,0	0/1:9,0:9:43.56:45,0,44	./.	./.	1/1:15,5:20:5.78:63,6,0	0/1:24,0:25:8.09:8,0,39	0/0:34,0:31:18.97:0,19,212	0/0:35,0:30:5.93:0,6,39	0/1:28,0:27:6.12:6,0,224	0/1:25,0:22:21.70:22,0,142	0/0:16,0:14:6.02:0,6,82	0/1:19,1:18:22.56:23,0,138	0/1:18,1:17:17.68:18,0,118	0/1:20,1:20:35.18:35,0,213	0/0:24,0:24:21.67:0,22,204	0/1:27,0:25:0.72:1,0,317	1/1:31,6:35:24.03:259,24,0	1/1:17,5:20:9.01:89,9,0	1/1:24,1:19:7.13:47,7,0	1/1:22,2:23:6.55:41,7,0	0/1:58,0:48:5.35:26,0,5	0/1:23,0:23:52.04:52,0,180	0/0:17,0:19:2.98:0,3,23	1/1:21,8:26:8.43:74,8,0	0/0:24,0:22:18.03:0,18,214	0/1:31,1:27:10.44:76,0,10	0/1:23,2:23:36.55:37,0,62	1/1:10,0:9:12.65:111,13,0
chr10	69585150	.	C	CTTG	9230.96	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-11.664;DP=646;FS=2.595;HRun=0;HaplotypeScore=86.8370;InbreedingCoeff=0.9999;MQ=87.34;MQ0=0;MQRankSum=-3.639;QD=56.98;ReadPosRankSum=2.871;VQSLOD=7.1457;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,41:44:99:2587,111,0	0/0:14,0:14:39.12:0,39,659	0/0:22,0:23:50.52:0,51,873	0/0:21,0:22:52.22:0,52,857	1/1:0,26:27:69.23:1556,69,0	0/0:16,0:16:48.15:0,48,818	0/0:25,0:25:72.23:0,72,1232	0/0:28,0:28:72.24:0,72,1244	0/0:21,0:21:63.22:0,63,1112	0/0:23,0:23:69.22:0,69,1150	0/0:26,0:26:78.27:0,78,1374	0/0:15,0:15:45.15:0,45,786	0/0:33,0:33:99:0,99,1718	0/0:25,0:25:75.21:0,75,1262	0/0:20,0:20:60.19:0,60,1017	0/0:15,0:15:42.14:0,42,741	1/1:3,21:24:57.20:1334,57,0	1/1:0,16:18:36.12:851,36,0	0/0:19,0:19:57.19:0,57,982	0/0:31,0:31:90.31:0,90,1580	0/0:27,0:27:81.26:0,81,1389	0/0:18,0:18:51.16:0,51,872	1/1:0,26:26:75.26:1768,75,0	1/1:0,22:23:48.16:1134,48,0	0/0:24,0:24:72.22:0,72,1233	0/0:20,0:20:60.21:0,60,1052	0/0:24,0:24:69.24:0,69,1217	0/0:15,0:15:33.08:0,33,520
chr10	69587592	.	T	TGG	15743.75	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=1.020;DP=720;FS=1.244;HRun=1;HaplotypeScore=96.2564;InbreedingCoeff=0.9988;MQ=79.51;MQ0=0;MQRankSum=-0.284;QD=49.66;ReadPosRankSum=1.265;VQSLOD=4.8679;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,48:48:99:2491,129,0	0/0:12,0:12:36.12:0,36,550	0/0:22,0:20:42.28:0,42,738	0/0:26,0:23:29.98:0,30,396	1/1:0,26:26:75.26:1448,75,0	0/0:24,0:24:72.22:0,72,1077	0/0:21,0:21:63.17:0,63,900	0/0:38,0:38:99:0,108,1542	0/0:25,0:25:75.24:0,75,1124	0/0:25,0:25:69.23:0,69,1038	0/0:25,0:25:72.23:0,72,1080	0/0:30,0:30:90.29:0,90,1354	0/0:28,0:28:81.26:0,81,1215	0/0:23,0:23:69.21:0,69,1013	0/0:32,0:32:96.33:0,96,1468	0/0:26,0:26:72.22:0,72,1060	1/1:2,29:31:72.25:1391,72,0	1/1:0,17:17:39.13:753,39,0	1/1:3,22:27:78.23:1408,78,0	1/1:4,23:27:66.13:1195,66,0	1/1:0,25:25:66.23:1275,66,0	0/0:19,0:19:57.19:0,57,867	1/1:2,25:27:63.08:1217,63,0	1/1:2,22:24:63.17:1179,63,0	0/0:26,0:25:78.24:0,78,1151	1/1:0,23:23:69.16:1186,69,0	1/1:1,35:35:96.33:1853,96,0	1/1:0,6:6:18.06:347,18,0
chr10	69589358	.	C	CTCTCTCTCTCTCTCTGTG	4047.98	PASS	AB=1.000;AC=17;AF=0.315;AN=54;BaseQRankSum=-0.375;DP=750;FS=6.098;HRun=0;HaplotypeScore=197.9033;InbreedingCoeff=0.5071;MQ=37.31;MQ0=138;MQRankSum=-7.701;QD=24.39;ReadPosRankSum=-4.169;VQSLOD=1.3911;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:19:3.09:94,3,0	0/0:9,0:9:21.07:0,21,643	0/0:148,0:5:12.03:0,12,151	0/0:146,0:10:24:0,24,278	1/1:11,0:11:3.48:49,3,0	0/0:28,0:26:72.21:0,72,1769	0/0:32,0:30:57.11:0,57,1250	0/1:18,0:19:2.26:576,0,2	0/0:16,0:16:38.38:0,38,900	0/0:21,0:18:49.04:0,49,873	0/0:25,0:23:51.17:0,51,1225	0/0:19,0:19:48.14:0,48,947	0/0:23,0:22:63.05:0,63,1035	0/0:16,0:16:39.57:0,40,1043	0/0:17,0:17:36.11:0,36,1243	0/0:19,0:19:39.11:0,39,930	0/1:17,0:15:95.22:95,0,169	0/1:6,0:5:28.86:29,0,173	1/1:7,0:16:48.06:771,48,0	1/1:11,0:11:11.88:374,12,0	./.	0/0:12,0:11:26.99:0,27,473	0/1:18,0:16:0.43:1,0,0	0/0:20,0:17:0.47:0,0,1	0/0:25,0:25:53.97:0,54,1589	1/1:12,8:20:3.12:1441,3,0	0/1:18,0:17:35.79:358,0,36	1/1:2,1:2:3.01:261,3,0
chr10	69589367	.	TCACACACACACACACACACACACACACA	T	784.18	PASS	AC=4;AF=0.083;AN=48;BaseQRankSum=3.594;DP=720;FS=9.240;HRun=0;HaplotypeScore=240.6863;InbreedingCoeff=0.6603;MQ=37.69;MQ0=144;MQRankSum=-3.232;QD=39.21;ReadPosRankSum=0.553;VQSLOD=1.3458;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:12,8:19:1.36:0,1,3	0/0:8,0:9:18.06:0,18,1757	0/0:144,0:4:12.04:0,12,362	0/0:143,0:9:24.08:0,24,1232	./.	0/0:25,0:26:66.22:0,66,6630	0/0:33,0:31:45.15:0,45,4708	0/0:15,0:13:24.08:0,24,1099	0/0:16,0:15:36.12:0,36,3497	0/0:24,0:21:48.16:0,48,4290	0/0:22,0:22:51.18:0,51,4910	0/0:22,0:21:35.68:0,36,4567	0/0:24,0:24:60.21:0,60,6710	0/0:14,0:14:27.09:0,27,2814	0/0:13,0:17:21.07:0,21,2120	0/0:17,0:18:42.14:0,42,4224	1/1:9,5:12:12.04:868,12,0	1/1:6,0:3:2.04:6,2,0	0/0:13,0:14:33.11:0,33,1982	0/0:9,0:11:2.95:0,3,257	./.	0/0:10,0:10:24.08:0,24,2247	0/0:8,6:13:2.24:0,2,4	./.	0/0:26,0:25:48.16:0,48,4632	0/0:16,0:15:27.52:0,28,1710	0/0:6,0:16:7.57:0,8,349	./.
chr10	69590606	.	AGGATGAGTTCTTCAG	A	41.43	PASS	AB=0.728;AC=2;AF=0.036;AN=56;BaseQRankSum=4.898;DP=649;FS=37.374;HRun=0;HaplotypeScore=259.9558;InbreedingCoeff=-0.0410;MQ=88.22;MQ0=0;MQRankSum=4.325;QD=1.04;ReadPosRankSum=-4.913;VQSLOD=0.7293;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,117,7840	0/0:8,0:8:24.08:0,24,1524	0/0:27,0:27:78.27:0,78,4399	0/0:25,0:25:70.79:0,71,3987	0/1:13,7:20:59.62:60,0,2825	0/0:18,0:18:48.16:0,48,2802	0/0:27,0:27:81.26:0,81,5251	0/0:39,0:39:99:0,108,7386	0/0:22,0:22:66.23:0,66,4590	0/0:23,0:23:69.24:0,69,4374	0/1:12,8:20:70.60:71,0,2089	0/0:23,0:23:69.22:0,69,4615	0/0:23,0:23:69.24:0,69,4850	0/0:29,0:29:87.30:0,87,6044	0/0:31,0:31:93.32:0,93,6226	0/0:32,0:32:96.29:0,96,5889	0/0:35,0:35:99:0,105,7559	0/0:24,0:24:72.25:0,72,5182	0/0:16,0:16:48.15:0,48,2661	0/0:18,0:18:51.17:0,51,3111	0/0:20,0:20:60.21:0,60,4212	0/0:15,0:15:45.15:0,45,3028	0/0:12,0:12:33.11:0,33,2483	0/0:31,0:31:93.32:0,93,6805	0/0:17,0:17:51.18:0,51,3580	0/0:24,0:24:69.24:0,69,4749	0/0:27,0:27:81.26:0,81,5704	0/0:2,0:2:6.02:0,6,456
chr10	69592530	.	TA	T	1742.86	PASS	AB=0.764;AC=12;AF=0.214;AN=56;BaseQRankSum=8.351;DP=615;FS=10.568;HRun=11;HaplotypeScore=64.4733;InbreedingCoeff=0.8280;MQ=72.29;MQ0=0;MQRankSum=-2.157;QD=14.77;ReadPosRankSum=1.677;VQSLOD=3.4794;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:39:99:0,111,1127	0/0:15,0:15:21.36:0,21,389	0/1:12,1:14:2.51:3,0,223	0/0:14,1:13:8.42:0,8,273	0/0:38,1:39:74.54:0,75,951	0/0:22,1:23:41.52:0,42,647	0/0:22,2:25:25.75:0,26,660	0/0:4,1:26:60.85:0,61,320	0/0:22,1:23:29.49:0,29,512	0/0:25,0:25:57.14:0,57,607	0/0:17,0:17:43.34:0,43,444	0/0:19,0:19:42.07:0,42,435	0/0:24,2:26:41.59:0,42,640	0/0:21,0:21:60.13:0,60,626	0/0:28,0:28:81.19:0,81,857	0/0:16,0:16:39.10:0,39,416	0/0:28,0:28:69.65:0,70,737	0/0:21,1:22:23.48:0,23,455	0/1:7,7:15:6:152,0,6	1/1:2,20:23:59.92:493,60,0	1/1:1,15:16:38.95:320,39,0	0/0:18,0:18:48.11:0,48,503	0/0:25,1:28:34.41:0,34,560	0/0:23,2:26:26.13:0,26,633	0/0:17,0:18:38.93:0,39,398	1/1:1,26:27:48.92:608,49,0	1/1:5,11:16:26.88:221,27,0	1/1:2,5:7:14.98:123,15,0
chr10	69593655	.	G	GT	4878.29	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-13.227;DP=683;FS=7.875;HRun=5;HaplotypeScore=64.6537;InbreedingCoeff=0.9976;MQ=93.00;MQ0=0;MQRankSum=-3.048;QD=33.64;ReadPosRankSum=0.297;VQSLOD=5.1530;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,138,1429	0/0:13,0:13:33.05:0,33,338	0/0:31,0:31:81.11:0,81,844	0/0:29,0:29:66.62:0,67,704	0/0:16,0:16:45.11:0,45,482	0/0:25,0:25:66.17:0,66,709	0/0:20,0:20:57.14:0,57,612	0/0:34,0:34:90.16:0,90,922	0/0:23,0:23:63.14:0,63,668	0/0:28,0:28:75.19:0,75,806	0/0:23,0:23:69.15:0,69,731	0/0:22,0:22:63.16:0,63,677	0/0:21,0:21:60.13:0,60,635	0/0:22,0:22:62.51:0,63,644	0/0:25,0:25:69.17:0,69,735	0/0:27,0:27:75.15:0,75,788	0/0:24,0:24:69.15:0,69,730	0/0:19,0:19:51.13:0,51,548	1/1:2,24:26:72.20:905,72,0	1/1:5,20:25:66.21:854,66,0	1/1:4,25:29:69.22:908,69,0	0/0:19,0:19:51.12:0,51,541	0/0:25,0:25:72.13:0,72,759	0/0:29,0:29:81.16:0,81,858	0/0:12,0:12:30.07:0,30,322	1/1:3,25:28:16.78:909,17,0	1/1:1,22:23:57.19:750,57,0	1/1:0,14:14:42.14:553,42,0
chr10	69594304	.	AAGAGAGACAG	A	4345.39	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=10.103;DP=712;FS=1.709;HRun=0;HaplotypeScore=203.5262;InbreedingCoeff=0.9328;MQ=69.74;MQ0=4;MQRankSum=-9.856;QD=40.99;ReadPosRankSum=0.108;VQSLOD=4.7323;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:69.22:0,69,2792	0/0:8,0:8:12.04:0,12,555	0/0:38,0:26:27.03:0,27,646	0/0:59,0:35:3.50:0,3,595	0/0:33,0:33:69.22:0,69,2852	0/0:31,0:31:75.26:0,75,3225	0/0:23,0:23:48.16:0,48,1922	0/0:42,0:42:60.21:0,60,2608	0/0:19,0:19:51.18:0,51,2472	0/0:31,0:31:57.19:0,57,2497	0/0:23,0:23:42.12:0,42,1732	0/0:25,0:25:39.13:0,39,1788	0/0:28,0:29:60.12:0,60,2700	0/0:19,0:19:42.12:0,42,1727	0/0:26,0:26:57.19:0,57,2669	0/0:27,0:27:75.26:0,75,3638	0/0:25,0:25:51.15:0,51,2140	0/0:32,0:32:75.21:0,75,3038	1/1:13,8:20:21.07:635,21,0	1/1:9,19:28:57.19:1386,57,0	1/1:11,1:11:6.02:80,6,0	0/0:15,0:15:36.11:0,36,1483	0/0:24,0:24:57.18:0,57,2435	0/0:28,0:28:54.19:0,54,2328	0/0:18,0:18:45.15:0,45,2111	1/1:13,8:21:39.12:1049,39,0	1/1:5,11:16:36.12:834,36,0	1/1:4,4:8:12.04:363,12,0
chr10	69594401	.	TA	T	4648.49	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=13.110;DP=696;FS=7.652;HRun=4;HaplotypeScore=69.0437;InbreedingCoeff=0.9998;MQ=86.16;MQ0=0;MQRankSum=-5.360;QD=31.41;ReadPosRankSum=3.573;VQSLOD=5.3087;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,111,1513	0/0:10,0:10:30.10:0,30,420	0/0:32,0:33:92.87:0,93,1193	0/0:25,0:24:57.12:0,57,681	0/0:40,0:40:99:0,114,1560	0/0:30,0:30:87.27:0,87,1184	0/0:17,0:17:51.17:0,51,713	0/0:45,0:45:99:0,126,1764	0/0:19,0:19:57.19:0,57,798	0/0:31,0:31:93.30:0,93,1289	0/0:16,0:16:39.12:0,39,528	0/0:26,0:26:78.18:0,78,1066	0/0:31,0:31:90.30:0,90,1260	0/0:15,0:15:45.14:0,45,608	0/0:24,0:24:72.21:0,72,974	0/0:25,0:25:72.23:0,72,990	0/0:29,0:29:84.27:0,84,1158	0/0:14,0:14:36.12:0,36,504	1/1:1,19:20:54.16:638,54,0	1/1:1,30:31:87.14:1008,87,0	1/1:0,25:25:63.19:756,63,0	0/0:19,0:19:51.17:0,51,714	0/0:22,0:22:66.21:0,66,899	0/0:24,0:24:66.22:0,66,923	0/0:15,0:15:39.13:0,39,546	1/1:1,30:31:51.24:1023,51,0	1/1:2,25:26:66.20:792,66,0	1/1:0,14:14:36.11:432,36,0
chr10	69594509	.	T	TA	4914.88	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-12.882;DP=686;FS=0.000;HRun=7;HaplotypeScore=62.8405;InbreedingCoeff=0.9994;MQ=77.95;MQ0=0;MQRankSum=-2.365;QD=31.11;ReadPosRankSum=-0.990;VQSLOD=4.5792;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:93.15:0,93,898	0/0:12,0:12:29.99:0,30,274	0/0:15,0:15:44.10:0,44,410	0/0:15,0:15:41.94:0,42,390	0/0:33,0:33:96.15:0,96,927	0/0:34,0:34:90.13:0,90,863	0/0:22,0:22:66.11:0,66,637	0/0:37,0:37:96.11:0,96,915	0/0:23,0:23:48.03:0,48,450	0/0:38,0:38:99:0,99,949	0/0:17,0:17:51.08:0,51,493	0/0:22,0:22:63.07:0,63,597	0/0:30,0:30:81.13:0,81,782	0/0:21,0:21:51.08:0,51,493	0/0:30,0:30:81.12:0,81,782	0/0:14,0:14:39.06:0,39,377	0/0:15,0:15:39.06:0,39,377	0/0:10,0:10:26.97:0,27,244	1/1:4,27:31:81.25:979,81,0	1/1:3,19:22:54.08:619,54,0	1/1:4,28:32:81.25:977,81,0	0/0:28,0:28:72.09:0,72,689	0/0:29,0:29:81.13:0,81,782	0/0:27,0:27:69.07:0,69,658	0/0:24,0:24:72.12:0,72,695	1/1:3,31:34:93.29:1123,93,0	1/1:4,26:29:75.23:906,75,0	1/1:1,8:9:27.05:311,27,0
chr10	69597698	.	ATC	A	923.40	PASS	AB=0.809;AC=18;AF=0.346;AN=52;BaseQRankSum=4.716;DP=324;FS=6.495;HRun=0;HaplotypeScore=56.0378;InbreedingCoeff=0.1404;MQ=42.25;MQ0=64;MQRankSum=-0.337;QD=6.41;ReadPosRankSum=0.283;VQSLOD=2.0396;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,1:15:8.33:0,8,72	0/1:11,0:10:7.28:7,0,76	./.	./.	0/1:15,0:15:11.74:26,0,12	0/0:17,0:15:13.45:0,13,187	1/1:11,0:6:2.06:7,2,0	0/0:16,0:11:24.07:0,24,338	0/0:11,1:6:14.92:0,15,197	0/0:9,0:8:8.56:0,9,123	0/0:10,0:9:18.05:0,18,252	0/0:13,0:9:1.59:0,2,32	0/0:15,0:13:28.67:0,29,450	0/0:8,5:12:20.90:0,21,317	0/0:12,0:10:23.90:0,24,363	0/0:9,0:9:18.06:0,18,273	0/1:9,7:11:30.43:156,0,30	0/1:9,9:15:75.37:281,0,75	1/1:7,2:4:6.02:86,6,0	1/1:2,2:2:3.01:43,3,0	0/1:7,6:9:29.53:77,0,30	0/0:9,1:10:17.97:0,18,272	1/1:3,3:4:9.03:128,9,0	1/1:9,2:5:3.01:43,3,0	0/0:19,0:14:33.08:0,33,459	0/1:8,4:8:26.40:157,0,26	0/1:4,2:4:34.43:35,0,34	0/1:11,1:8:25.31:36,0,25
chr10	69597910	.	T	TC	1638.01	PASS	AB=1.000;AC=39;AF=0.886;AN=44;DP=87;FS=0.000;HRun=1;HaplotypeScore=24.0876;InbreedingCoeff=0.1679;MQ=39.26;MQ0=14;QD=23.40;VQSLOD=3.1201;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,2:4:6.01:69,6,0	1/1:1,2:2:6.01:70,6,0	./.	./.	1/1:0,1:1:3.01:45,3,0	1/1:1,1:2:5.61:52,6,0	0/0:0,1:2:0.47:0,0,1	1/1:7,3:5:17.96:209,18,0	1/1:0,4:4:9.03:129,9,0	1/1:0,2:2:6.02:84,6,0	1/1:1,0:1:3.01:43,3,0	1/1:0,2:2:2.95:42,3,0	1/1:0,3:3:9.03:135,9,0	1/1:1,5:6:12.51:172,13,0	1/1:0,3:3:3.01:42,3,0	1/1:0,3:3:6.02:87,6,0	./.	1/1:4,0:4:8.70:56,9,0	1/1:2,0:2:3.01:42,3,0	./.	./.	1/1:1,3:2:2.86:45,3,0	1/1:2,2:4:6.02:82,6,0	./.	0/0:1,1:1:0:0,0,0	1/1:1,2:3:6.02:83,6,0	1/1:8,0:8:24.03:227,24,0	0/1:1,0:1:0:0,0,0
chr10	69597911	.	C	CT	910.58	PASS	AB=1.000;AC=37;AF=0.841;AN=44;BaseQRankSum=0.544;DP=90;FS=0.000;HRun=1;HaplotypeScore=26.1424;InbreedingCoeff=0.1782;MQ=39.74;MQ0=14;MQRankSum=-1.414;QD=12.65;ReadPosRankSum=2.720;VQSLOD=2.2314;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:4,0:4:10.08:10,0,19	1/1:2,1:2:4.54:27,5,0	./.	./.	1/1:1,0:1:2.96:19,3,0	1/1:2,0:2:5.50:26,5,0	0/0:2,0:2:0.47:0,0,1	1/1:11,0:6:12.92:92,13,0	1/1:5,0:5:8.76:51,9,0	1/1:2,0:2:5.64:27,6,0	1/1:1,0:1:2.90:16,3,0	1/1:3,0:3:2.81:15,3,0	1/1:3,0:3:8.90:63,9,0	1/1:5,1:6:11.63:73,12,0	1/1:3,0:3:2.88:15,3,0	1/1:3,0:3:5.87:40,6,0	0/0:1,0:1:3:0,3,25	1/1:3,1:4:4.01:35,4,0	1/1:1,1:2:2.98:21,3,0	./.	./.	1/1:4,0:2:2.79:18,3,0	1/1:2,0:4:5.83:33,6,0	./.	0/0:2,0:1:0:0,0,0	1/1:3,0:3:5.97:45,6,0	1/1:0,8:8:24.08:383,24,0	./.
chr10	69597970	.	CTG	C	829.80	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.597;DP=324;FS=8.424;HRun=0;HaplotypeScore=54.9992;InbreedingCoeff=0.7809;MQ=60.82;MQ0=1;MQRankSum=0.376;QD=28.61;ReadPosRankSum=-4.105;VQSLOD=2.9619;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:22,1:22:18.58:0,19,794	0/0:7,0:6:18.06:0,18,298	0/0:11,0:7:21.04:0,21,307	0/0:5,0:5:6.70:0,7,129	0/0:15,0:15:45.15:0,45,740	0/0:9,0:9:24.08:0,24,404	0/0:13,0:13:27.09:0,27,450	1/1:4,25:29:75.21:924,75,0	0/0:12,0:11:27.09:0,27,455	0/0:10,0:10:30.10:0,30,485	0/0:7,0:7:18.06:0,18,303	0/0:15,0:15:39.13:0,39,640	0/0:11,0:11:30.10:0,30,506	0/0:14,0:13:27.09:0,27,446	0/0:10,0:10:24.08:0,24,385	0/0:7,0:7:18.06:0,18,291	0/0:6,0:6:18.06:0,18,303	0/0:11,0:11:27.06:0,27,425	0/0:9,0:8:18.06:0,18,302	0/0:10,0:10:30.10:0,30,505	0/0:17,0:17:48.16:0,48,801	0/0:14,0:14:38.63:0,39,614	0/0:13,0:13:33.03:0,33,502	0/0:7,0:7:15.05:0,15,252	0/0:10,0:9:23.84:0,24,378	0/0:11,0:11:33.11:0,33,542	0/0:15,0:15:45.15:0,45,756	0/0:3,0:3:6.02:0,6,101
chr10	69598564	.	A	AG	372.31	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.224;DP=674;FS=0.859;HRun=1;HaplotypeScore=85.2777;InbreedingCoeff=0.9917;MQ=95.87;MQ0=0;MQRankSum=-5.729;QD=13.30;ReadPosRankSum=-1.883;VQSLOD=1.8728;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:78.25:0,78,1006	0/0:13,0:13:39.09:0,39,475	0/0:38,0:38:99:0,108,1311	0/0:28,0:28:62.48:0,62,853	0/0:42,0:42:99:0,126,1589	0/0:24,0:24:66.21:0,66,856	0/0:24,0:24:72.23:0,72,935	1/1:11,17:28:50.15:467,50,0	0/0:25,0:25:75.16:0,75,937	0/0:23,0:23:60.19:0,60,767	0/0:21,0:21:57.18:0,57,736	0/0:17,0:17:51.17:0,51,662	0/0:17,0:17:51.11:0,51,628	0/0:24,0:24:72.23:0,72,934	0/0:18,0:18:51.17:0,51,662	0/0:20,0:20:57.19:0,57,740	0/0:26,0:26:75.24:0,75,972	0/0:15,0:15:45.15:0,45,583	0/0:23,0:23:69.22:0,69,881	0/0:30,0:30:84.26:0,84,1076	0/0:24,0:24:69.21:0,69,882	0/0:29,0:29:87.28:0,87,1125	0/0:23,0:23:66.19:0,66,825	0/0:28,0:28:84.26:0,84,1075	0/0:12,0:12:33.10:0,33,415	0/0:29,0:29:87.28:0,87,1129	0/0:41,0:39:99:0,123,1582	0/0:6,0:6:18.06:0,18,234
chr10	69598566	.	C	CTTTTGT	2516.82	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.795;DP=685;FS=0.683;HRun=0;HaplotypeScore=159.4552;InbreedingCoeff=0.9914;MQ=95.29;MQ0=0;MQRankSum=-7.676;QD=76.27;ReadPosRankSum=-2.679;VQSLOD=3.3247;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:78.27:0,78,1991	0/0:11,0:11:33.11:0,33,846	0/0:38,0:38:99:0,108,2540	0/0:28,0:28:77.23:0,77,1837	0/0:44,0:44:99:0,129,3170	0/0:24,0:24:66.23:0,66,1691	0/0:24,0:24:72.25:0,72,1842	1/1:16,17:33:89.96:2612,90,0	0/0:24,0:24:72.19:0,72,1737	0/0:22,0:22:66.17:0,66,1562	0/0:21,0:21:63.19:0,63,1500	0/0:17,0:17:51.18:0,51,1307	0/0:18,0:18:51.16:0,51,1192	0/0:25,0:25:75.24:0,75,1870	0/0:17,0:17:51.18:0,51,1307	0/0:20,0:20:60.20:0,60,1483	0/0:26,0:26:78.20:0,78,1837	0/0:16,0:16:45.15:0,45,1153	0/0:22,0:22:66.23:0,66,1644	0/0:31,0:31:84.27:0,84,2070	0/0:23,0:23:66.23:0,66,1657	0/0:29,0:29:87.30:0,87,2221	0/0:25,0:25:66.22:0,66,1610	0/0:28,0:28:84.28:0,84,2075	0/0:11,0:11:31.34:0,31,718	0/0:31,0:31:90.30:0,90,2230	0/0:44,0:42:99:0,126,3123	0/0:6,0:6:18.06:0,18,461
chr10	69600675	.	G	GAGGCAA	20845.59	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-3.379;DP=605;FS=2.699;HRun=0;HaplotypeScore=123.3476;InbreedingCoeff=0.9986;MQ=76.40;MQ0=0;MQRankSum=-18.216;QD=71.63;ReadPosRankSum=-4.446;VQSLOD=4.1544;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:16,22:38:93.13:2636,93,0	0/0:12,0:12:36.12:0,36,840	0/0:18,0:18:45.14:0,45,993	0/0:16,0:16:48.13:0,48,1074	1/1:6,15:21:54.01:1196,54,0	0/0:19,0:19:48.16:0,48,1135	0/0:29,0:29:87.29:0,87,2010	1/1:17,13:30:84.29:2725,84,0	0/0:25,0:25:72.23:0,72,1637	0/0:20,0:20:57.20:0,57,1348	0/0:16,0:16:42.14:0,42,993	0/0:24,0:24:63.21:0,63,1445	0/0:19,0:19:54.19:0,54,1275	0/0:24,0:24:63.19:0,63,1400	0/0:26,0:26:75.23:0,75,1646	0/0:28,0:28:84.28:0,84,1917	1/1:7,15:26:48.16:1653,48,0	1/1:1,13:15:30.10:1068,30,0	1/1:4,16:22:60.14:1854,60,0	1/1:4,20:24:72.16:2182,72,0	1/1:17,10:29:48.01:1311,48,0	0/0:16,0:16:42.14:0,42,918	1/1:3,7:12:27.01:716,27,0	1/1:8,13:24:36.12:1235,36,0	0/0:22,0:22:63.19:0,63,1375	1/1:4,8:13:33.09:1052,33,0	1/1:4,27:31:81.19:2690,81,0	1/1:3,3:6:18.02:527,18,0
chr10	69600705	.	G	GC	979.29	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=3.037;DP=572;FS=0.000;HRun=7;HaplotypeScore=101.8120;InbreedingCoeff=0.9978;MQ=84.40;MQ0=0;MQRankSum=-4.287;QD=19.99;ReadPosRankSum=-1.679;VQSLOD=2.3347;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,22:28:60.05:669,60,0	0/0:12,0:12:36.06:0,36,348	0/0:25,0:24:63.07:0,63,597	0/0:17,0:17:26.82:0,27,247	1/1:5,16:21:36.11:432,36,0	0/0:20,0:20:51.08:0,51,492	0/0:24,0:24:54.07:0,54,521	0/0:22,0:22:30.01:0,30,287	0/0:26,0:26:72.11:0,72,695	0/0:20,0:20:42.04:0,42,404	0/0:16,0:16:42.06:0,42,400	0/0:23,0:23:60.09:0,60,579	0/0:16,0:16:48.08:0,48,463	0/0:28,0:28:72.10:0,72,695	0/0:22,0:22:63.10:0,63,608	0/0:28,0:27:75.11:0,75,724	0/0:20,0:20:42.06:0,42,404	0/0:15,0:15:30.05:0,30,289	0/0:21,0:21:51.05:0,51,485	0/0:23,0:23:45.06:0,45,432	0/0:23,0:23:39.02:0,39,368	0/0:19,0:19:54.09:0,54,521	0/0:15,0:15:27.04:0,27,261	0/0:22,0:22:48.07:0,48,462	0/0:17,0:17:42.06:0,42,405	0/0:14,0:14:42.07:0,42,405	0/0:25,0:25:66.10:0,66,634	0/0:10,0:10:30.05:0,30,290
chr10	69600936	.	GC	G	807.55	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.155;DP=617;FS=7.092;HRun=1;HaplotypeScore=60.4041;InbreedingCoeff=0.9823;MQ=90.16;MQ0=0;MQRankSum=-0.932;QD=36.71;ReadPosRankSum=-3.179;VQSLOD=2.4627;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:49,0:49:99:0,141,2221	0/0:6,0:6:17.96:0,18,231	0/0:26,0:26:77.62:0,78,1159	0/0:22,0:22:57.50:0,58,799	0/0:12,0:12:33.11:0,33,527	0/0:9,0:9:27.09:0,27,432	0/0:32,0:32:96.33:0,96,1512	1/1:0,22:22:66.21:902,66,0	0/0:17,0:17:51.17:0,51,798	0/0:21,0:21:63.21:0,63,985	0/0:19,0:19:54.17:0,54,833	0/0:21,0:21:63.20:0,63,969	0/0:21,0:21:63.20:0,63,981	0/0:25,0:25:75.26:0,75,1198	0/0:24,0:24:69.21:0,69,1057	0/0:30,0:30:90.29:0,90,1414	0/0:43,0:43:99:0,129,2055	0/0:29,0:29:78.22:0,78,1219	0/0:15,0:15:45.14:0,45,698	0/0:21,0:21:63.20:0,63,980	0/0:38,0:38:99:0,111,1741	0/0:14,0:14:42.12:0,42,625	0/0:11,0:11:30.10:0,30,479	0/0:23,0:23:69.22:0,69,1078	0/0:13,0:13:39.12:0,39,600	0/0:20,0:20:57.19:0,57,912	0/0:28,0:28:81.28:0,81,1287	0/0:6,0:6:18.06:0,18,273
chr10	69601112	.	A	AG	5083.13	PASS	AB=0.531;AC=11;AF=0.196;AN=56;BaseQRankSum=-12.175;DP=711;FS=0.354;HRun=4;HaplotypeScore=67.8514;InbreedingCoeff=0.9235;MQ=88.88;MQ0=0;MQRankSum=-3.510;QD=35.06;ReadPosRankSum=0.623;VQSLOD=5.2826;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:51,0:51:99:0,138,1565	0/0:9,0:9:27.08:0,27,306	0/0:27,0:27:74.87:0,75,815	0/0:24,0:24:63.07:0,63,663	0/0:22,0:22:60.17:0,60,680	0/0:11,0:11:33.09:0,33,374	0/0:43,0:43:99:0,120,1361	0/0:34,0:34:96.25:0,96,1067	0/0:21,0:21:57.14:0,57,637	0/0:24,0:24:66.18:0,66,743	0/0:18,0:18:45.21:0,45,570	0/0:22,0:22:63.18:0,63,715	0/0:28,0:29:83.01:0,83,902	0/0:28,0:28:81.23:0,81,918	0/0:29,0:29:87.25:0,87,987	0/0:25,0:25:72.19:0,72,807	0/0:33,0:33:93.18:0,93,1011	0/0:23,0:23:63.18:0,63,714	1/1:8,9:17:30.10:404,30,0	1/1:2,20:22:60.20:821,60,0	1/1:1,38:39:99:1558,114,0	0/0:14,0:14:42.12:0,42,476	0/0:15,0:15:42.10:0,42,466	0/0:39,0:39:99:0,111,1259	0/0:25,0:25:69.18:0,69,773	0/1:4,30:34:2.82:1112,0,3	1/1:1,26:27:72.24:984,72,0	1/1:1,5:6:15.05:205,15,0
chr10	69601665	.	CGT	C	1003.99	PASS	AB=0.885;AC=33;AF=0.635;AN=52;BaseQRankSum=1.663;DP=701;FS=0.000;HRun=0;HaplotypeScore=90.7110;InbreedingCoeff=0.3233;MQ=64.49;MQ0=16;MQRankSum=0.431;QD=2.28;ReadPosRankSum=3.337;VQSLOD=1.5700;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:45,0:47:5.68:28,6,0	1/1:7,0:8:5.85:46,6,0	./.	./.	1/1:18,0:22:11.22:53,11,0	0/1:20,5:25:41.40:52,0,41	1/1:34,6:39:25.50:231,25,0	0/0:26,0:26:0.47:0,0,1	1/1:18,0:18:2.84:14,3,0	1/1:20,3:20:6.01:63,6,0	1/1:9,1:12:5.85:46,6,0	0/1:21,0:22:16.05:37,0,16	1/1:19,1:20:10.67:83,11,0	1/1:16,3:19:3.01:32,3,0	1/1:22,0:26:8.52:42,9,0	0/1:20,2:22:13.46:44,0,13	0/1:20,1:23:40.86:74,0,41	1/1:12,2:14:12.03:127,12,0	0/0:20,0:17:9.83:0,10,83	0/0:12,0:12:5.61:0,6,51	0/0:62,0:60:35.80:0,36,298	0/1:16,4:20:20.06:20,0,48	1/1:14,3:18:5.74:46,6,0	1/1:34,7:41:6.01:64,6,0	1/1:18,0:18:8.68:71,9,0	0/0:21,0:25:14.98:0,15,139	0/0:15,0:19:3:0,3,26	0/0:12,0:17:24.07:0,24,209
chr10	69603137	.	T	TG	8531.66	PASS	AB=0.531;AC=17;AF=0.304;AN=56;BaseQRankSum=5.721;DP=765;FS=1.308;HRun=4;HaplotypeScore=86.8190;InbreedingCoeff=0.9173;MQ=82.66;MQ0=0;MQRankSum=-2.607;QD=32.56;ReadPosRankSum=-0.633;VQSLOD=4.8963;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,41:47:99:1354,99,0	0/0:18,0:18:54.13:0,54,600	0/0:30,0:30:75.16:0,75,818	0/0:24,0:24:47.28:0,47,538	1/1:2,25:27:72.24:979,72,0	0/0:18,0:18:48.14:0,48,544	0/0:32,0:32:86.28:0,86,958	1/1:3,32:35:90.26:1182,90,0	0/0:30,0:30:78.22:0,78,885	0/0:30,0:30:81.19:0,81,904	0/0:22,0:22:60.15:0,60,670	0/0:23,0:23:63.14:0,63,699	0/0:24,0:24:66.19:0,66,747	0/0:25,0:25:69.19:0,69,779	0/0:38,0:38:99:0,111,1244	0/0:25,0:24:69.14:0,69,758	0/0:31,0:31:84.24:0,84,952	0/0:27,0:27:75.15:0,75,823	1/1:2,17:19:54.12:699,54,0	1/1:1,22:23:63.21:859,63,0	1/1:4,50:54:99:1683,123,0	0/0:31,0:31:84.24:0,84,953	0/0:24,0:24:60.17:0,60,680	0/0:18,0:18:48.14:0,48,544	0/0:33,0:33:93.26:0,93,1054	0/1:2,15:17:16.89:544,0,17	1/1:6,21:27:51.17:698,51,0	1/1:0,13:13:39.13:534,39,0
chr10	69603297	.	C	CAT	15161.70	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-19.130;DP=835;FS=2.217;HRun=0;HaplotypeScore=91.9456;InbreedingCoeff=1.0000;MQ=82.97;MQ0=1;MQRankSum=-2.964;QD=49.71;ReadPosRankSum=1.706;VQSLOD=5.9549;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,37:41:99:1967,106,0	0/0:23,0:23:69.22:0,69,994	0/0:20,0:20:47.65:0,48,711	0/0:26,0:26:59.51:0,60,769	1/1:0,31:31:84.29:1568,84,0	0/0:24,0:23:63.21:0,63,923	0/0:19,0:19:54.18:0,54,795	1/1:5,32:39:99:1846,102,0	0/0:27,0:27:78.24:0,78,1110	0/0:28,0:28:84.28:0,84,1210	0/0:23,0:23:63.21:0,63,928	0/0:19,0:19:54.18:0,54,795	0/0:33,0:33:96.32:0,96,1411	0/0:26,0:26:75.22:0,75,1059	0/0:38,0:38:99:0,114,1639	0/0:30,0:30:87.28:0,87,1261	0/0:27,0:27:81.25:0,81,1170	0/0:37,0:37:99:0,108,1549	1/1:1,18:20:60.16:1009,60,0	1/1:2,35:37:99:1854,99,0	1/1:0,25:25:63.22:1179,63,0	0/0:43,0:43:99:0,126,1738	0/0:35,0:34:96.31:0,96,1393	0/0:25,0:25:72.24:0,72,1057	0/0:27,0:27:78.25:0,78,1126	1/1:2,38:41:99:2097,100,0	1/1:1,39:39:99:2012,108,0	1/1:1,30:31:87.30:1629,87,0
chr10	69603665	.	AT	A	1330.01	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.316;DP=970;FS=0.624;HRun=1;HaplotypeScore=92.8963;InbreedingCoeff=0.9695;MQ=67.48;MQ0=0;MQRankSum=0.574;QD=38.00;ReadPosRankSum=-4.470;VQSLOD=2.2416;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:99:0,99,1557	0/0:23,0:23:69.22:0,69,1069	0/0:18,0:17:31.76:0,32,404	0/0:19,0:18:11.97:0,12,520	0/0:43,0:43:99:0,129,1965	0/0:30,0:30:90.31:0,90,1419	0/0:26,0:26:78.25:0,78,1214	1/1:0,35:35:99:1425,102,0	0/0:35,0:35:99:0,105,1665	0/0:45,0:45:99:0,135,2159	0/0:29,0:29:87.30:0,87,1391	0/0:49,0:49:99:0,148,2350	0/0:47,0:47:99:0,141,2241	0/0:45,0:45:99:0,132,2073	0/0:60,0:60:99:0,181,2851	0/0:41,0:41:99:0,123,1942	0/0:31,0:31:93.32:0,93,1486	0/0:26,0:26:75.26:0,75,1190	0/0:18,0:18:54.18:0,54,854	0/0:42,0:42:99:0,126,2014	0/0:54,0:54:99:0,163,2561	0/0:40,0:40:99:0,117,1813	0/0:36,0:36:99:0,108,1726	0/0:35,0:35:99:0,105,1659	0/0:25,0:25:75.24:0,75,1165	0/0:40,0:40:99:0,120,1871	0/0:29,0:29:87.30:0,87,1390	0/0:16,0:16:45.15:0,45,719
chr10	69604362	.	C	CTG	6630.35	PASS	AB=0.593;AC=13;AF=0.232;AN=56;BaseQRankSum=-14.439;DP=718;FS=6.181;HRun=0;HaplotypeScore=87.4296;InbreedingCoeff=0.8683;MQ=82.46;MQ0=1;MQRankSum=-1.826;QD=37.04;ReadPosRankSum=-3.287;VQSLOD=6.0703;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:60,0:60:99:0,150,1858	0/0:11,0:11:27.09:0,27,351	0/0:24,0:22:41.56:0,42,522	0/0:30,0:31:62.65:0,63,808	0/0:31,0:31:72.22:0,72,922	0/0:26,0:26:75.24:0,75,975	0/0:12,0:12:33.11:0,33,429	1/1:6,21:27:64.44:1023,64,0	0/0:28,0:28:72.22:0,72,922	0/0:29,0:29:72.23:0,72,936	0/0:23,0:23:57.18:0,57,741	0/0:19,0:19:54.18:0,54,702	0/0:28,0:28:81.26:0,81,1053	0/0:25,0:25:69.22:0,69,897	0/0:15,0:15:42.14:0,42,546	0/0:17,0:17:45.15:0,45,585	0/0:40,0:40:99:0,99,1270	0/0:38,0:38:99:0,99,1283	1/1:3,13:16:33.10:536,33,0	1/1:5,25:30:63.22:1070,63,0	1/1:3,29:32:78.27:1326,78,0	0/0:13,0:13:27.09:0,27,351	0/0:25,0:25:72.22:0,72,920	0/0:22,0:22:60.20:0,60,780	0/0:21,0:21:51.17:0,51,663	0/1:10,22:32:41.88:989,0,42	1/1:2,37:38:96.33:1632,96,0	1/1:2,1:3:3.90:53,4,0
chr10	69606580	.	GACACACACACACACACAC	G	1153.42	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=4.740;DP=563;FS=7.656;HRun=0;HaplotypeScore=241.4655;InbreedingCoeff=0.7773;MQ=70.10;MQ0=11;MQRankSum=-4.473;QD=16.02;ReadPosRankSum=0.065;VQSLOD=1.3093;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:36,15:52:15.05:707,15,0	0/0:6,0:6:9.03:0,9,519	0/0:27,0:21:14.96:0,15,161	0/0:28,0:25:8.96:0,9,71	1/1:10,9:20:6.86:555,7,0	0/0:19,0:19:39.61:0,40,2553	0/0:23,0:23:24.08:0,24,1741	0/0:20,0:20:9.02:0,9,202	0/0:16,0:18:17.95:0,18,911	0/0:20,0:20:40.63:0,41,1856	0/0:13,0:13:12.51:0,13,937	0/0:20,0:21:28.65:0,29,1761	0/0:15,0:15:18.06:0,18,1345	0/0:19,0:19:33.08:0,33,2360	0/0:15,0:19:27.08:0,27,1179	0/0:19,0:18:33.06:0,33,1734	0/0:23,0:23:33.09:0,33,2032	0/0:25,0:26:57.16:0,57,3369	0/0:13,0:12:11.62:0,12,460	0/0:17,0:17:15.03:0,15,974	0/0:19,0:16:30.06:0,30,1880	0/0:18,0:17:27.05:0,27,1667	0/0:13,0:13:9.03:0,9,616	0/0:38,0:37:33.09:0,33,2168	0/0:11,0:11:15.04:0,15,796	0/0:20,0:19:27.08:0,27,1431	0/0:15,0:15:20.66:0,21,1005	0/0:9,0:9:18.03:0,18,948
chr10	69606626	.	CACA	C	455.11	PASS	AB=0.929;AC=5;AF=0.089;AN=56;BaseQRankSum=7.151;DP=620;FS=21.701;HRun=0;HaplotypeScore=101.9233;InbreedingCoeff=-0.1014;MQ=61.55;MQ0=38;MQRankSum=-2.382;QD=5.11;ReadPosRankSum=2.030;VQSLOD=0.4946;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:26.67:0,27,433	0/0:6,0:6:15.52:0,16,268	0/0:38,0:14:39.24:0,39,469	0/0:38,0:18:48.11:0,48,593	0/0:25,0:25:11.66:0,12,282	0/0:24,0:24:63.13:0,63,992	0/0:20,0:19:42.37:0,42,735	0/0:21,0:21:59.92:0,60,426	0/0:20,0:19:45.13:0,45,664	0/0:17,0:17:47.87:0,48,608	0/0:14,0:14:33.11:0,33,538	0/0:29,0:28:60.98:0,61,958	0/0:14,0:14:36.12:0,36,589	0/0:26,0:26:60.20:0,60,1070	0/0:21,0:21:50.95:0,51,642	0/0:20,0:19:57.08:0,57,756	0/0:26,0:26:27.01:0,27,365	0/0:33,0:33:92.72:0,93,1117	0/1:12,0:7:38.67:133,0,39	0/1:14,0:12:12.13:12,0,83	0/1:31,0:19:99:273,0,169	0/0:21,0:21:54.14:0,54,853	0/0:14,0:13:30.10:0,30,422	0/0:27,0:26:26.97:0,27,356	0/0:20,0:20:41.82:0,42,517	0/1:19,0:10:99:109,0,194	0/0:14,0:5:8.82:0,9,50	0/1:5,6:8:43.83:44,0,59
chr10	69606628	.	C	CAG	1077.63	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-2.965;DP=609;FS=0.000;HRun=0;HaplotypeScore=93.5066;InbreedingCoeff=0.8158;MQ=64.15;MQ0=36;MQRankSum=1.176;QD=11.46;ReadPosRankSum=1.884;VQSLOD=2.9767;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:77.65:0,78,613	0/0:8,0:8:14.99:0,15,141	0/0:39,0:15:32.46:0,32,323	0/0:40,0:20:43.52:0,44,432	0/0:26,0:26:50.88:0,51,410	0/0:23,0:23:53.93:0,54,476	0/0:21,0:20:44.88:0,45,435	0/0:24,0:24:65.64:0,66,541	0/0:18,0:17:41.68:0,42,356	0/0:14,0:14:34.28:0,34,307	0/0:13,0:13:29.81:0,30,237	0/0:28,0:27:59.91:0,60,542	0/0:13,0:13:32.97:0,33,304	0/0:26,0:26:55.15:0,55,458	0/0:21,0:21:50.94:0,51,424	0/0:17,0:17:40.17:0,40,318	1/1:3,19:23:0.70:220,1,0	1/1:30,0:30:15.40:357,15,0	0/0:9,0:7:14.24:0,14,72	0/0:14,0:12:7.37:0,7,28	0/0:20,0:18:34.41:0,34,179	0/0:21,0:21:44.93:0,45,396	1/1:15,0:14:29.92:259,30,0	1/1:3,23:26:22.89:387,23,0	0/0:20,0:20:40.91:0,41,305	0/0:9,0:8:14.53:0,15,84	0/0:10,0:5:6.27:0,6,25	0/0:10,0:8:2.06:0,2,13
chr10	69606629	.	A	AC	917.31	PASS	AB=0.517;AC=11;AF=0.196;AN=56;BaseQRankSum=5.190;DP=610;FS=26.549;HRun=1;HaplotypeScore=87.7503;InbreedingCoeff=0.8371;MQ=66.02;MQ0=34;MQRankSum=0.013;QD=8.91;ReadPosRankSum=-1.149;VQSLOD=-0.4710;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:43,0:43:77.58:0,78,593	0/0:8,0:8:20.91:0,21,255	0/0:40,0:16:42.14:0,42,492	0/0:41,0:21:53.94:0,54,633	0/0:26,0:26:50.72:0,51,394	0/0:22,0:22:56.63:0,57,755	0/0:20,0:20:51.13:0,51,663	0/0:24,0:24:64.99:0,65,453	0/0:18,0:17:43.03:0,43,575	0/0:14,0:14:37.05:0,37,443	0/0:13,0:13:33.11:0,33,445	0/0:28,0:27:60.18:0,60,802	0/0:13,0:13:33.11:0,33,451	0/0:26,0:26:60.19:0,60,802	0/0:21,0:21:51.14:0,51,660	0/0:16,0:16:41.73:0,42,541	0/0:23,0:23:20.53:0,21,184	0/0:30,0:30:77.81:0,78,971	1/1:6,9:10:18.04:218,18,0	0/1:1,14:13:4.53:64,0,5	1/1:17,13:17:39.09:500,39,0	0/0:21,0:21:51.11:0,51,666	0/0:15,0:14:33.09:0,33,410	0/0:25,0:25:19.70:0,20,101	0/0:20,0:20:31.72:0,32,487	1/1:13,3:8:2.18:114,2,0	1/1:5,9:5:8.99:129,9,0	1/1:11,2:10:8.20:54,8,0
chr10	69608283	.	TCTGC	T	4601.62	PASS	AB=0.929;AC=17;AF=0.304;AN=56;BaseQRankSum=10.676;DP=641;FS=0.000;HRun=0;HaplotypeScore=94.7251;InbreedingCoeff=0.8839;MQ=54.74;MQ0=65;MQRankSum=-3.226;QD=32.64;ReadPosRankSum=-3.280;VQSLOD=4.0673;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:27:63.21:1091,63,0	0/0:9,0:8:24.08:0,24,651	0/0:46,0:14:41.97:0,42,937	0/0:48,0:16:39.60:0,40,914	1/1:10,2:10:12.04:177,12,0	0/0:10,0:9:27.09:0,27,647	0/0:37,0:33:99:0,99,2621	1/1:12,1:13:39.08:578,39,0	0/0:27,0:26:69.19:0,69,1794	0/0:20,0:18:51.16:0,51,1166	0/0:11,0:10:24.55:0,25,603	0/0:32,0:31:81.23:0,81,2076	0/0:28,0:28:78.27:0,78,2081	0/0:20,0:18:45.15:0,45,1242	0/0:26,0:24:67.11:0,67,1741	0/0:24,0:23:69.22:0,69,1799	0/0:46,0:41:99:0,121,3108	0/0:42,0:40:99:0,114,2910	1/1:15,1:9:27.09:441,27,0	1/1:10,2:12:24.08:405,24,0	1/1:27,1:24:54.18:895,54,0	0/0:11,0:10:30.10:0,30,832	0/0:10,0:6:15.05:0,15,417	0/0:46,0:42:99:0,108,2738	0/0:7,0:5:12.04:0,12,307	0/1:12,1:11:53.57:447,0,54	1/1:15,0:15:26.92:457,27,0	1/1:4,0:2:6.02:111,6,0
chr10	69608287	.	C	CCT	5472.14	PASS	AB=0.571;AC=17;AF=0.304;AN=56;BaseQRankSum=7.669;DP=607;FS=0.869;HRun=0;HaplotypeScore=81.1565;InbreedingCoeff=0.8893;MQ=57.79;MQ0=18;MQRankSum=-3.010;QD=39.09;ReadPosRankSum=-2.542;VQSLOD=6.0474;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,27:30:66.23:1231,66,0	0/0:8,0:8:24.08:0,24,368	0/0:34,0:17:45.05:0,45,654	0/0:39,0:18:23.10:0,23,602	1/1:3,9:11:12.04:231,12,0	0/0:9,0:9:24.08:0,24,367	0/0:36,0:35:99:0,102,1531	1/1:4,12:16:45.12:824,45,0	0/0:26,0:26:72.20:0,72,1075	0/0:19,0:19:51.17:0,51,760	0/0:9,0:9:24.08:0,24,368	0/0:32,0:31:87.24:0,87,1285	0/0:29,0:29:78.26:0,78,1194	0/0:22,0:20:45.15:0,45,687	0/0:26,0:25:62.82:0,63,959	0/0:24,0:24:66.22:0,66,1007	0/0:45,0:43:99:0,117,1784	0/0:41,0:40:99:0,114,1730	1/1:3,8:9:27.09:516,27,0	1/1:2,10:13:24.08:459,24,0	1/1:3,22:25:54.19:1036,54,0	0/0:11,0:11:33.11:0,33,504	0/0:8,0:7:18.06:0,18,274	0/0:42,0:42:99:0,108,1627	0/0:6,0:6:15.05:0,15,229	0/1:3,9:11:15.83:486,0,16	1/1:0,17:18:30.10:574,30,0	1/1:0,3:3:6.02:115,6,0
chr10	69608288	.	C	CCT	1055.76	PASS	AB=1.000;AC=16;AF=0.286;AN=56;BaseQRankSum=14.140;DP=599;FS=2.628;HRun=0;HaplotypeScore=97.4118;InbreedingCoeff=0.7896;MQ=58.60;MQ0=6;MQRankSum=-3.082;QD=7.43;ReadPosRankSum=-0.473;VQSLOD=3.4044;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:33,0:33:57.10:327,57,0	0/0:8,0:8:24.08:0,24,391	0/0:31,0:17:45.12:0,45,688	0/0:36,0:18:44.97:0,45,688	0/1:12,0:11:11.54:35,0,12	0/0:9,0:9:24.08:0,24,391	0/0:35,0:35:99:0,105,1643	1/1:15,1:16:7.20:171,7,0	0/0:26,0:26:72.03:0,72,1135	0/0:19,0:19:51.14:0,51,793	0/0:9,0:9:27.05:0,27,411	0/0:29,1:31:87.03:0,87,1335	0/0:29,0:29:84.25:0,84,1312	0/0:19,0:19:51.15:0,51,780	0/0:25,0:25:62.82:0,63,1019	0/0:27,0:27:66.23:0,66,1070	0/0:43,2:43:99:0,120,1907	0/0:40,0:40:99:0,114,1834	1/1:10,0:10:18.86:93,19,0	1/1:14,0:14:22.25:116,22,0	1/1:24,1:25:47.46:271,47,0	0/0:12,0:12:33.11:0,33,530	0/0:7,0:7:21.03:0,21,308	0/0:42,0:42:99:0,108,1725	0/0:6,0:6:15.05:0,15,244	0/1:11,0:11:26.73:97,0,27	1/1:18,0:18:25.18:114,25,0	1/1:3,0:3:5.60:25,6,0
chr10	69608630	.	T	TG	2013.25	PASS	AB=0.900;AC=13;AF=0.232;AN=56;BaseQRankSum=11.748;DP=609;FS=9.828;HRun=0;HaplotypeScore=95.8800;InbreedingCoeff=0.8700;MQ=60.67;MQ0=9;MQRankSum=-10.657;QD=12.35;ReadPosRankSum=3.738;VQSLOD=4.5010;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:24:61.32:0,61,688	0/0:14,0:14:42.08:0,42,503	0/0:26,0:10:16.97:0,17,186	0/0:14,0:7:4.14:0,4,69	0/0:40,0:37:99:0,103,1116	0/0:16,0:16:40.88:0,41,438	0/0:18,0:18:46.80:0,47,461	1/1:15,11:22:18.85:307,19,0	0/0:20,0:19:54.04:0,54,556	0/0:25,0:25:61.77:0,62,640	0/0:20,0:20:60.10:0,60,707	0/0:19,0:19:55.53:0,56,567	0/0:22,0:22:62.25:0,62,571	0/0:19,0:19:51.05:0,51,604	0/0:29,0:29:75.07:0,75,834	0/0:21,0:21:61.61:0,62,673	0/0:23,0:23:55.76:0,56,572	0/0:18,0:18:51.12:0,51,613	1/1:18,9:24:18.41:365,18,0	1/1:7,14:21:33.19:280,33,0	0/1:8,1:8:18.90:45,0,19	0/0:10,0:10:27.05:0,27,302	0/0:22,0:21:61.34:0,61,654	0/0:22,0:22:58.35:0,58,725	0/0:24,0:23:60.51:0,61,700	1/1:13,19:32:40.86:439,41,0	1/1:14,22:36:95.81:612,96,0	1/1:3,8:10:26.13:154,26,0
chr10	69608632	.	T	TTTTTG	6198.77	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=9.574;DP=600;FS=2.208;HRun=0;HaplotypeScore=124.8133;InbreedingCoeff=0.9561;MQ=60.56;MQ0=10;MQRankSum=-11.534;QD=38.74;ReadPosRankSum=4.277;VQSLOD=4.8589;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:56.20:0,56,800	0/0:14,0:14:39.08:0,39,612	0/0:26,0:10:23.81:0,24,258	0/0:15,0:7:3.11:0,3,72	0/0:40,0:37:99:0,105,1421	0/0:15,0:15:34.90:0,35,505	0/0:17,0:17:36.89:0,37,484	1/1:15,10:21:40.14:725,40,0	0/0:20,0:19:49.51:0,50,646	0/0:25,0:25:68.78:0,69,757	0/0:18,0:18:51.13:0,51,783	0/0:18,0:18:52.48:0,52,680	0/0:22,0:22:59:0,59,654	0/0:20,0:20:51.06:0,51,774	0/0:28,0:28:68.49:0,68,938	0/0:20,0:20:57.08:0,57,782	0/0:22,0:22:59.84:0,60,773	0/0:18,0:18:51.14:0,51,810	1/1:19,9:24:48.10:706,48,0	1/1:7,14:21:57.34:1077,57,0	1/1:8,1:8:8.41:162,8,0	0/0:10,0:10:24.03:0,24,340	0/0:23,0:22:63.14:0,63,872	0/0:22,0:22:60.13:0,60,958	0/0:24,0:23:58.97:0,59,893	1/1:14,18:32:56.27:1354,56,0	1/1:11,22:33:77.01:1598,77,0	1/1:3,8:10:27.09:577,27,0
chr10	69611367	.	AGAG	A	1528.10	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=5.259;DP=357;FS=7.206;HRun=0;HaplotypeScore=65.3169;InbreedingCoeff=0.9315;MQ=80.93;MQ0=3;MQRankSum=-3.810;QD=26.81;ReadPosRankSum=-0.944;VQSLOD=2.6606;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:18,0:18:21.04:0,21,282	0/0:6,0:6:15.52:0,16,306	0/0:36,0:24:43.46:0,43,763	0/0:45,0:25:26.57:0,27,532	0/0:11,0:11:24.04:0,24,402	0/0:12,0:11:27.08:0,27,568	0/0:21,0:21:57.10:0,57,1118	1/1:7,3:10:17.72:188,18,0	0/0:4,0:4:9.03:0,9,171	0/0:11,0:11:24.07:0,24,430	0/0:17,0:17:39.12:0,39,807	0/0:5,0:5:9.43:0,9,91	0/0:14,0:14:33.11:0,33,695	0/0:5,0:5:11.91:0,12,217	0/0:8,0:7:13.99:0,14,178	0/0:14,0:14:30.03:0,30,591	0/0:10,0:10:24.07:0,24,501	0/0:10,0:10:24.01:0,24,409	1/1:4,4:8:20.40:266,20,0	1/1:2,6:8:15.05:262,15,0	1/1:0,11:11:17.98:249,18,0	0/0:12,0:12:24.02:0,24,419	0/0:13,0:13:30.03:0,30,464	0/0:13,0:13:21.07:0,21,459	0/0:11,0:11:29.82:0,30,554	1/1:0,9:9:27.05:390,27,0	1/1:2,6:8:11.63:257,12,0	1/1:0,3:3:6.02:105,6,0
chr10	69611393	.	GGA	G	187	PASS	AB=0.978;AC=15;AF=0.395;AN=38;BaseQRankSum=-0.643;DP=381;FS=11.635;HRun=0;HaplotypeScore=66.4918;InbreedingCoeff=0.1422;MQ=58.57;MQ0=22;MQRankSum=0.491;QD=1.78;ReadPosRankSum=3.062;VQSLOD=0.4594;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:13,1:12:9.94:27,0,10	./.	./.	./.	./.	0/0:10,0:9:0.47:0,0,1	0/0:21,0:20:2.93:0,3,20	0/0:20,0:19:0:0,0,0	0/0:6,0:6:0:0,0,0	0/0:11,0:11:0:0,0,0	0/0:14,0:14:1.36:0,1,3	1/1:5,2:7:6.01:61,6,0	1/1:18,1:18:2.80:32,3,0	./.	1/1:4,1:3:3.01:33,3,0	1/1:9,0:9:2.95:24,3,0	./.	0/1:13,0:11:23.52:24,0,32	./.	0/0:13,0:13:0:0,0,0	./.	0/0:16,0:13:0:0,0,0	0/0:11,0:11:2.97:0,3,31	0/0:14,0:13:3:0,3,31	1/1:13,1:14:1.25:30,1,0	1/1:11,0:11:3.01:33,3,0	0/1:13,0:11:7.28:24,0,7	./.
chr10	69614406	.	A	ATTTATTTGTT	22463.84	PASS	AB=0.594;AC=17;AF=0.304;AN=56;BaseQRankSum=-8.002;DP=832;FS=0.314;HRun=0;HaplotypeScore=220.8331;InbreedingCoeff=0.9500;MQ=67.03;MQ0=2;MQRankSum=-12.795;QD=79.94;ReadPosRankSum=-3.329;VQSLOD=3.5580;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:6,12:21:33.07:1540,33,0	0/0:12,0:12:33.11:0,33,975	0/0:17,0:16:21.01:0,21,366	0/0:21,0:21:39.04:0,39,924	1/1:9,24:36:78.17:3233,78,0	0/0:26,0:26:66.20:0,66,1893	0/0:22,0:22:45.15:0,45,1334	1/1:24,20:44:87.27:2922,87,0	0/0:34,0:34:81.28:0,81,2459	0/0:42,0:42:99:0,108,2900	0/0:25,0:25:66.23:0,66,1976	0/0:37,0:37:93.27:0,93,2439	0/0:35,0:35:90.14:0,90,2471	0/0:31,0:31:87.25:0,87,2546	0/0:49,0:49:99:0,123,3695	0/0:38,0:38:96.26:0,96,2487	0/0:16,0:16:33.11:0,33,917	0/0:16,0:16:42.14:0,42,1285	1/1:16,15:34:54.02:2752,54,0	1/1:6,26:33:69.17:2683,69,0	1/1:9,6:17:12.04:613,12,0	0/0:37,0:37:99:0,99,2791	0/0:24,0:24:60.20:0,60,1622	0/0:41,0:41:99:0,108,2904	0/0:28,0:28:78.20:0,78,2159	0/1:12,23:38:0.47:3618,0,0	1/1:7,27:36:78.27:3878,78,0	1/1:8,9:19:24.08:1225,24,0
chr10	69614692	.	GT	G	5785.25	PASS	AB=0.875;AC=13;AF=0.232;AN=56;BaseQRankSum=13.709;DP=770;FS=0.683;HRun=2;HaplotypeScore=77.4569;InbreedingCoeff=0.9011;MQ=70.51;MQ0=0;MQRankSum=-0.004;QD=32.87;ReadPosRankSum=0.904;VQSLOD=4.7603;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,159,2151	0/0:21,0:21:63.21:0,63,941	0/0:15,0:15:31.59:0,32,391	0/1:12,1:13:18.43:18,0,371	0/0:30,0:30:75.15:0,75,1034	0/0:28,0:28:84.16:0,84,1169	0/0:24,0:24:69.14:0,69,947	0/0:28,0:28:84.24:0,84,1154	0/0:30,0:30:90.30:0,90,1347	0/0:32,0:32:96.31:0,96,1420	0/0:23,0:23:69.23:0,69,1034	0/0:30,0:30:87.29:0,87,1284	0/0:28,0:28:84.27:0,84,1238	0/0:34,0:34:99:0,102,1468	0/0:37,0:37:99:0,111,1641	0/0:22,0:22:66.22:0,66,989	0/0:33,0:33:96.25:0,96,1361	0/0:21,0:21:63.21:0,63,944	1/1:0,20:20:54.01:701,54,0	1/1:0,24:24:66.06:813,66,0	1/1:1,31:32:90.29:1168,90,0	0/0:37,0:37:99:0,111,1613	0/0:32,0:32:96.30:0,96,1398	0/0:16,0:16:48.09:0,48,653	0/0:19,0:19:57.19:0,57,854	1/1:4,22:26:47.30:869,47,0	1/1:0,37:37:99:1401,108,0	1/1:0,23:23:63.20:815,63,0
chr10	69617120	.	A	AGACAGGATACATTCAGAGGTGT	2095.96	PASS	AB=0.829;AC=24;AF=0.923;AN=26;BaseQRankSum=-3.776;DP=47;FS=21.364;HRun=0;HaplotypeScore=36.6882;InbreedingCoeff=-0.2565;MQ=139.06;MQ0=0;MQRankSum=-1.961;QD=56.65;ReadPosRankSum=-1.667;VQSLOD=0.3091;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,0:2:2.99:23,3,0	./.	0/1:6,0:8:62.51:832,0,63	0/1:10,1:12:95.30:726,0,95	./.	./.	./.	1/1:1,0:1:3:28,3,0	./.	./.	1/1:1,0:1:3:25,3,0	./.	./.	1/1:1,0:1:3.01:165,3,0	1/1:3,0:3:6.01:75,6,0	1/1:1,0:1:3.01:98,3,0	./.	./.	1/1:2,0:2:5.99:70,6,0	1/1:1,0:1:3.01:50,3,0	1/1:1,0:1:3.01:49,3,0	./.	./.	1/1:3,0:3:2.97:20,3,0	./.	1/1:1,0:1:2.99:23,3,0	./.	./.
chr10	69618087	.	G	GATAATAATAATA	6761.17	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=13.936;DP=576;FS=0.000;HRun=0;HaplotypeScore=219.8187;InbreedingCoeff=0.8811;MQ=55.31;MQ0=3;MQRankSum=-13.325;QD=40.98;ReadPosRankSum=-2.655;VQSLOD=3.6790;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,6:20:21.07:895,21,0	0/0:12,0:12:30.09:0,30,971	0/0:18,0:14:29.98:0,30,544	0/0:13,0:10:24.08:0,24,609	1/1:19,0:19:51.03:922,51,0	0/0:33,0:33:84.27:0,84,2718	0/0:20,0:20:45.14:0,45,1490	1/1:47,0:41:69.01:849,69,0	0/0:21,0:21:51.14:0,51,1678	0/0:29,0:29:69.21:0,69,2203	0/0:15,0:15:33.11:0,33,974	0/0:23,0:23:57.18:0,57,1688	0/0:24,0:24:63.20:0,63,1969	0/0:23,0:23:57.18:0,57,1793	0/0:28,0:27:69.22:0,69,2040	0/0:28,0:28:72.23:0,72,2314	0/0:24,0:24:48.16:0,48,1527	0/0:26,0:26:69.24:0,69,2354	1/1:17,0:17:36.12:1187,36,0	1/1:6,0:6:14.91:330,15,0	1/1:7,0:7:3.01:86,3,0	0/0:17,0:17:45.15:0,45,1563	0/0:11,0:11:27.09:0,27,904	0/0:21,0:21:57.12:0,57,1587	0/0:25,0:25:66.19:0,66,1971	0/1:16,0:16:99:661,0,176	1/1:25,0:25:54.05:1269,54,0	1/1:8,0:8:20.28:562,20,0
chr10	69618588	.	T	TA	7144.22	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-8.407;DP=656;FS=4.270;HRun=5;HaplotypeScore=69.0436;InbreedingCoeff=0.9955;MQ=68.94;MQ0=1;MQRankSum=-2.802;QD=34.02;ReadPosRankSum=-0.296;VQSLOD=5.0809;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,29:32:64.16:1039,64,0	0/0:8,0:8:24.06:0,24,258	0/0:24,0:21:47.21:0,47,460	0/0:19,0:19:16.86:0,17,383	1/1:1,29:30:75.24:987,75,0	0/0:20,0:20:57.14:0,57,613	0/0:31,0:31:90.19:0,90,950	1/1:3,19:22:57.19:750,57,0	0/0:26,0:26:72.18:0,72,774	0/0:33,0:33:90.22:0,90,961	0/0:29,0:29:84.21:0,84,903	0/0:26,0:26:75.17:0,75,797	0/0:11,0:11:30.08:0,30,322	0/0:25,0:25:69.17:0,69,737	0/0:34,0:34:93.23:0,93,999	0/0:16,0:16:45.11:0,45,484	0/0:28,0:28:47.22:0,47,658	0/0:21,0:21:54.05:0,54,565	1/1:2,16:18:51.17:671,51,0	1/1:4,22:26:60.20:789,60,0	1/1:1,19:20:51.17:671,51,0	0/0:16,0:16:48.11:0,48,507	0/0:24,0:24:57.14:0,57,613	0/0:31,0:31:93.23:0,93,999	0/0:22,0:22:63.16:0,63,677	1/1:1,29:30:87.28:1143,87,0	1/1:2,25:26:69.22:897,69,0	1/1:0,5:5:15.05:197,15,0
chr10	69618891	.	AAACAAC	A	10186.14	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=17.712;DP=752;FS=13.251;HRun=0;HaplotypeScore=170.4294;InbreedingCoeff=0.9936;MQ=61.27;MQ0=1;MQRankSum=-14.682;QD=41.58;ReadPosRankSum=-1.029;VQSLOD=3.8912;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,28:31:51.09:1016,51,0	0/0:11,0:11:30.10:0,30,1006	0/0:18,0:16:36.07:0,36,829	0/0:12,0:11:27.08:0,27,682	1/1:8,30:38:60.09:1168,60,0	0/0:32,0:32:84.27:0,84,2677	0/0:23,0:23:45.15:0,45,1470	1/1:9,33:42:96.19:1825,96,0	0/0:15,0:15:39.12:0,39,1189	0/0:44,0:44:99:0,114,3810	0/0:26,0:26:60.17:0,60,1844	0/0:20,0:20:60.21:0,60,2015	0/0:31,0:31:78.25:0,78,2505	0/0:27,0:27:78.25:0,78,2460	0/0:31,0:31:84.23:0,84,2573	0/0:24,0:24:66.23:0,66,2170	0/0:43,0:42:99:0,114,3485	0/0:20,0:22:48.08:0,48,1385	1/1:4,15:19:45.15:898,45,0	1/1:4,28:31:72.10:1385,72,0	1/1:5,10:15:12:215,12,0	0/0:32,0:32:84.28:0,84,2663	0/0:29,0:29:75.24:0,75,2383	0/0:38,0:38:99:0,102,3408	0/0:29,0:29:63.20:0,63,1993	1/1:4,30:34:90.22:1862,90,0	1/1:1,25:26:72.11:1426,72,0	1/1:2,6:8:18.06:391,18,0
chr10	69619887	.	A	AC	3636.49	PASS	AB=0.667;AC=13;AF=0.232;AN=56;BaseQRankSum=7.676;DP=617;FS=2.295;HRun=6;HaplotypeScore=84.3778;InbreedingCoeff=0.9420;MQ=91.05;MQ0=0;MQRankSum=-3.057;QD=24.91;ReadPosRankSum=-0.038;VQSLOD=3.2387;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:31.26:0,31,386	0/0:5,0:5:15.02:0,15,146	0/0:28,0:28:69.10:0,69,682	0/0:24,0:23:44.40:0,44,484	0/0:29,0:29:49.86:0,50,376	0/0:15,0:15:42.10:0,42,428	0/0:24,0:24:66.15:0,66,673	1/1:14,0:25:28.71:162,29,0	0/0:14,0:14:36.04:0,36,358	0/0:30,0:30:84.19:0,84,856	0/0:19,0:19:45.99:0,46,460	0/0:28,0:28:72.14:0,72,727	0/0:22,0:22:66.15:0,66,672	0/0:16,0:16:39.08:0,39,398	0/0:25,0:25:63.10:0,63,633	0/0:27,0:27:78.14:0,78,776	0/0:27,0:27:69.14:0,69,696	0/0:22,0:22:54.12:0,54,550	1/1:3,16:19:48.15:589,48,0	1/1:7,18:25:57.18:696,57,0	1/1:4,18:22:46.03:556,46,0	0/0:19,0:19:54.11:0,54,544	0/0:17,0:17:45.06:0,45,443	0/0:17,0:17:39.08:0,39,397	0/0:27,0:27:72.16:0,72,734	0/1:8,8:16:0.52:302,0,1	1/1:3,31:34:93.29:1146,93,0	1/1:0,5:5:15.05:185,15,0
chr10	69619966	.	TA	T	5249.15	PASS	AB=0.867;AC=25;AF=0.446;AN=56;BaseQRankSum=12.238;DP=575;FS=0.687;HRun=10;HaplotypeScore=90.6867;InbreedingCoeff=0.8921;MQ=78.35;MQ0=0;MQRankSum=-6.223;QD=18.81;ReadPosRankSum=2.003;VQSLOD=5.4480;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,22:26:71.67:583,72,0	0/0:6,0:6:13.28:0,13,136	0/0:14,1:15:11.18:0,11,227	0/0:21,0:19:12.73:0,13,263	1/1:5,12:17:6.16:276,6,0	0/0:22,0:22:54.06:0,54,581	0/0:17,0:17:45.10:0,45,481	0/0:6,0:28:68.70:0,69,383	0/0:13,0:13:33.07:0,33,356	0/1:22,4:26:44:44,0,469	0/0:27,0:28:72:0,72,760	0/0:20,0:20:27.58:0,28,477	0/0:15,0:15:42.07:0,42,442	0/0:17,0:17:36.10:0,36,398	0/0:21,0:21:57.15:0,57,631	0/0:16,1:17:22.08:0,22,472	1/1:3,26:29:65.98:573,66,0	1/1:3,19:22:50.99:443,51,0	1/1:6,10:16:41.78:339,42,0	1/1:11,28:39:73.71:800,74,0	1/1:1,9:10:20.23:174,20,0	0/0:24,0:24:63.15:0,63,681	1/1:2,17:19:41.99:365,42,0	1/1:3,21:24:56.97:495,57,0	0/0:30,0:30:84.21:0,84,914	1/1:3,19:22:56.99:495,57,0	1/1:3,22:26:70.89:586,71,0	1/1:0,3:3:9:78,9,0
chr10	69620004	.	A	ATTT	9819.98	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=0.252;DP=558;FS=6.120;HRun=5;HaplotypeScore=93.4928;InbreedingCoeff=0.9429;MQ=70.07;MQ0=0;MQRankSum=-10.528;QD=54.86;ReadPosRankSum=-1.390;VQSLOD=3.9833;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,24:25:69.24:1479,69,0	0/0:11,0:11:30.10:0,30,454	0/0:14,0:13:0.14:0,0,230	0/0:16,0:12:30.05:0,30,406	1/1:3,17:20:42.10:815,42,0	0/0:18,0:18:45.15:0,45,687	0/0:18,0:18:54.18:0,54,827	1/1:7,18:27:60.14:1168,60,0	0/0:18,0:18:51.14:0,51,738	0/0:24,0:24:69.23:0,69,1034	0/0:21,0:21:54.18:0,54,826	0/0:21,0:21:48.14:0,48,713	0/0:28,0:28:78.19:0,78,1119	0/0:10,0:10:30.10:0,30,460	0/0:24,0:24:72.20:0,72,1038	0/0:18,0:18:45.15:0,45,689	0/0:26,0:26:72.24:0,72,1104	0/0:17,0:17:48.13:0,48,709	1/1:1,12:13:39.12:802,39,0	1/1:7,24:31:81.26:1749,81,0	1/1:3,6:9:21.07:399,21,0	0/0:21,0:21:51.16:0,51,762	0/0:23,0:23:63.18:0,63,913	0/0:23,0:23:63.17:0,63,919	0/0:28,0:28:75.25:0,75,1148	1/1:3,21:25:69.22:1496,69,0	1/1:2,25:27:81.28:1778,81,0	1/1:0,2:2:6.02:134,6,0
chr10	69622576	.	C	CTT	5099.37	PASS	AB=0.567;AC=17;AF=0.304;AN=56;BaseQRankSum=-0.630;DP=522;FS=1.199;HRun=8;HaplotypeScore=61.7016;InbreedingCoeff=0.9122;MQ=82.14;MQ0=0;MQRankSum=-1.534;QD=23.83;ReadPosRankSum=-0.582;VQSLOD=3.7630;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,0:30:59.89:206,60,0	0/0:5,0:5:15.04:0,15,167	0/0:14,0:14:20.90:0,21,258	0/0:15,0:15:33.04:0,33,349	1/1:2,0:24:54.17:225,54,0	0/0:14,0:14:39.10:0,39,435	0/0:20,0:20:51.10:0,51,550	1/1:8,0:42:85.39:299,85,0	0/0:15,0:15:33.07:0,33,359	0/0:18,0:18:36.08:0,36,395	0/0:15,0:15:39.10:0,39,435	0/0:18,0:18:48.12:0,48,533	0/0:16,0:16:42.11:0,42,468	0/0:20,0:20:51.10:0,51,559	0/0:17,0:17:48.13:0,48,535	0/0:17,0:17:48.11:0,48,526	0/0:31,0:31:81.20:0,81,903	0/0:17,0:17:45.11:0,45,501	1/1:4,11:15:36.05:518,36,0	1/1:1,24:25:72.21:1116,72,0	1/1:2,21:23:60.20:952,60,0	0/0:12,0:12:27.06:0,27,301	0/0:10,0:10:27.07:0,27,301	0/0:20,0:20:54.13:0,54,593	0/0:14,0:14:36.05:0,36,380	0/1:4,12:17:24.76:529,0,25	1/1:4,16:21:44.64:661,45,0	1/1:1,14:17:39.10:592,39,0
chr10	69624671	.	TCTTC	T	618.47	PASS	AB=1.000;AC=11;AF=0.212;AN=52;BaseQRankSum=5.843;DP=611;FS=8.715;HRun=0;HaplotypeScore=123.3092;InbreedingCoeff=0.3255;MQ=65.58;MQ0=6;MQRankSum=2.296;QD=3.73;ReadPosRankSum=-2.357;VQSLOD=0.9543;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:23,0:23:75.84:76,0,108	0/0:10,0:10:21.03:0,21,297	./.	./.	0/1:28,0:28:83.26:144,0,83	0/0:25,0:25:42.04:0,42,724	0/0:36,0:35:25.04:0,25,615	0/0:41,0:36:20.73:0,21,137	0/0:22,0:22:30.08:0,30,591	0/0:28,0:27:36.10:0,36,667	0/0:17,0:17:33.09:0,33,650	0/0:15,0:15:27.08:0,27,581	0/0:15,0:15:24.07:0,24,512	0/0:18,0:18:27.05:0,27,536	0/0:31,0:31:54.04:0,54,1042	0/0:33,0:33:39.10:0,39,785	1/1:16,0:16:3:28,3,0	0/1:13,0:14:19.08:19,0,26	0/0:24,0:23:18.05:0,18,255	0/0:18,0:18:20.99:0,21,304	0/0:26,0:25:14.18:0,14,355	1/1:14,14:27:32.85:393,33,0	1/1:18,0:18:2.38:51,2,0	0/1:18,0:18:3.04:3,0,71	0/0:17,0:17:33.01:0,33,581	0/1:20,0:20:48.95:49,0,289	0/0:20,0:20:20.16:0,20,469	0/0:11,0:11:15.04:0,15,241
chr10	69624691	.	CCTTCCTTCCTTCCTTCCTTCCTTT	C	1786.98	PASS	AB=0.682;AC=5;AF=0.089;AN=56;BaseQRankSum=3.884;DP=600;FS=0.000;HRun=0;HaplotypeScore=329.5430;InbreedingCoeff=0.2734;MQ=55.89;MQ0=16;MQRankSum=-4.752;QD=23.51;ReadPosRankSum=-0.619;VQSLOD=1.5551;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:24,0:23:45.14:0,45,1980	0/0:11,0:11:33.11:0,33,2093	0/0:9,0:2:3.01:0,3,36	0/0:19,0:6:6.41:0,6,132	0/0:29,0:29:58.22:0,58,3464	0/0:23,0:23:69.24:0,69,4851	0/0:35,0:34:96.24:0,96,4942	0/0:36,0:31:84.15:0,84,2574	0/0:21,0:21:57.20:0,57,4007	0/0:29,0:28:81.27:0,81,4981	0/0:14,0:14:42.08:0,42,3469	0/0:22,0:22:66.20:0,66,3960	0/0:23,0:23:66.16:0,66,4046	0/0:15,0:15:45.15:0,45,3294	0/0:31,0:31:93.31:0,93,6182	0/0:25,0:25:72.23:0,72,5160	0/1:1,15:16:56.91:189,0,57	0/1:2,15:17:99:220,0,106	0/0:26,0:18:42.16:0,42,1770	0/0:17,0:17:46.97:0,47,2484	0/0:21,0:20:48.16:0,48,2923	0/0:29,0:28:84.29:0,84,3882	1/1:0,23:23:12.24:569,12,0	0/1:20,0:19:99:928,0,165	0/0:17,0:17:48.16:0,48,3643	0/0:20,0:20:57.19:0,57,3236	0/0:20,0:19:57.16:0,57,3289	0/0:8,0:8:18.06:0,18,1362
chr10	69624711	.	CCTTT	C	2009.10	PASS	AB=0.943;AC=15;AF=0.268;AN=56;BaseQRankSum=8.507;DP=587;FS=4.851;HRun=0;HaplotypeScore=110.4058;InbreedingCoeff=0.1088;MQ=56.05;MQ0=14;MQRankSum=-0.714;QD=7.73;ReadPosRankSum=-1.735;VQSLOD=2.2732;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:8,15:22:13.11:209,0,13	0/0:17,0:17:33.95:0,34,445	0/0:18,0:6:10.78:0,11,98	0/0:35,0:6:3.38:0,3,73	1/1:5,22:27:50.56:525,51,0	0/0:24,0:24:66.10:0,66,983	0/0:29,0:28:69.06:0,69,948	0/0:25,0:24:50.74:0,51,396	0/0:18,0:18:47.94:0,48,762	0/0:23,0:22:54.01:0,54,914	0/0:15,0:15:44.94:0,45,796	0/0:20,0:20:57.01:0,57,857	0/0:19,0:19:54.06:0,54,740	0/0:14,0:14:39.08:0,39,685	0/0:26,0:26:66.13:0,66,1056	0/0:22,0:22:60.13:0,60,1058	0/1:16,0:16:17.36:29,0,17	1/1:17,0:17:3.01:35,3,0	0/1:21,0:16:85.87:134,0,86	0/1:18,0:18:88.79:166,0,89	0/1:14,0:13:99:104,0,99	0/1:32,0:31:79.99:80,0,420	1/1:23,0:23:9.42:91,9,0	0/1:21,0:20:28.30:204,0,28	0/0:16,0:16:39.09:0,39,664	0/1:20,3:23:80.73:356,0,81	0/1:25,0:24:99:242,0,117	0/0:5,0:5:12.01:0,12,121
chr10	69624753	.	CCTTTCCTT	C	535.53	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=1.887;DP=672;FS=1.179;HRun=0;HaplotypeScore=188.8585;InbreedingCoeff=0.7377;MQ=61.76;MQ0=12;MQRankSum=-0.966;QD=10.10;ReadPosRankSum=-2.308;VQSLOD=2.3315;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:28:48.16:0,48,1532	0/0:22,0:22:63.22:0,63,2524	0/1:33,0:15:1.61:2,0,586	0/0:72,0:15:24.07:0,24,557	0/0:24,0:24:51.18:0,51,1655	0/0:27,0:27:72.25:0,72,2869	0/0:26,0:26:66.22:0,66,2262	1/1:8,12:18:30.05:630,30,0	0/0:20,0:20:57.18:0,57,2166	0/0:19,0:19:54.18:0,54,1989	0/0:19,0:19:51.17:0,51,1824	0/0:24,0:24:72.24:0,72,2720	0/0:19,0:19:57.20:0,57,2281	0/0:16,0:16:42.14:0,42,1656	0/0:22,0:22:66.23:0,66,2671	0/0:32,0:32:87.30:0,87,3364	0/0:17,0:17:34.14:0,34,1212	0/0:14,0:14:12.04:0,12,480	0/0:14,0:14:36.09:0,36,1197	0/0:28,0:28:78.18:0,78,3001	0/0:13,0:12:29.85:0,30,959	0/0:41,0:41:99:0,111,4385	0/0:25,0:25:35.77:0,36,1431	0/0:24,0:23:60.16:0,60,2213	0/0:14,0:14:42.14:0,42,1700	0/0:24,0:24:60.11:0,60,2278	0/0:27,0:27:75.26:0,75,2781	0/0:7,0:7:21.07:0,21,902
chr10	69624997	.	GGA	G	703.58	PASS	AB=0.967;AC=14;AF=0.259;AN=54;BaseQRankSum=6.237;DP=633;FS=11.092;HRun=0;HaplotypeScore=98.8448;InbreedingCoeff=0.6585;MQ=68.11;MQ0=34;MQRankSum=-2.418;QD=5.29;ReadPosRankSum=-1.622;VQSLOD=2.0150;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:32:22.58:0,23,595	0/0:13,0:13:30.10:0,30,461	0/0:62,0:21:28.50:0,28,349	0/0:91,0:29:18.14:0,18,391	0/0:19,1:19:14.72:0,15,243	0/0:20,1:21:7.71:0,8,584	0/0:30,1:31:3.18:0,3,1022	1/1:15,5:17:16.86:223,17,0	0/0:19,0:19:48.11:0,48,698	0/0:18,0:18:39.12:0,39,617	0/0:17,0:17:32.83:0,33,506	0/0:23,0:23:9.35:0,9,618	0/1:13,1:14:5.60:6,0,449	0/0:17,0:17:45.15:0,45,710	0/0:28,0:28:5.83:0,6,831	0/0:26,1:27:22.65:0,23,824	0/0:13,0:13:21.71:0,22,463	0/0:13,0:13:23.98:0,24,318	1/1:16,2:17:8.91:147,9,0	1/1:9,1:10:9.03:112,9,0	1/1:11,6:13:14.99:154,15,0	0/1:23,0:22:7.70:8,0,705	0/0:12,0:10:24.03:0,24,357	0/0:22,0:21:26.95:0,27,441	0/0:17,0:17:33.11:0,33,525	1/1:16,1:16:2.89:173,3,0	1/1:12,2:13:2.70:46,3,0	./.
chr10	69625012	.	G	GA	667.93	PASS	AB=0.968;AC=14;AF=0.250;AN=56;BaseQRankSum=7.614;DP=655;FS=7.855;HRun=1;HaplotypeScore=97.0604;InbreedingCoeff=0.4855;MQ=56.19;MQ0=45;MQRankSum=-6.293;QD=4.15;ReadPosRankSum=-1.783;VQSLOD=-0.6588;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:36,1:34:10.55:11,0,498	0/0:12,0:12:30.09:0,30,392	0/0:71,0:14:17.88:0,18,259	0/0:112,0:26:23.45:0,23,495	0/0:19,0:18:14.72:0,15,193	0/0:20,0:20:54.06:0,54,682	0/0:29,0:29:84.12:0,84,1087	0/1:20,0:17:2.29:216,0,2	0/0:19,0:19:50.17:0,50,634	0/0:16,0:16:48.14:0,48,645	0/0:17,0:17:30.53:0,31,477	0/0:18,0:18:51.13:0,51,672	0/0:18,0:18:54.11:0,54,712	0/0:18,0:18:54.15:0,54,722	0/0:25,0:25:58.94:0,59,767	0/0:22,0:22:60.09:0,60,782	0/0:12,0:12:27.24:0,27,378	0/1:15,1:16:16.39:16,0,330	1/1:14,0:12:1.96:30,2,0	0/0:7,1:8:3.43:0,3,8	1/1:12,3:11:2.10:18,2,0	0/0:26,0:25:66.02:0,66,851	0/0:13,0:11:24.35:0,24,287	0/1:21,1:21:16.36:16,0,341	0/0:19,0:19:45.13:0,45,608	1/1:16,1:15:23.08:299,23,0	1/1:13,1:13:7.84:107,8,0	1/1:5,1:6:0.45:112,0,0
chr10	69625016	.	AG	A	1257.68	PASS	AB=0.869;AC=18;AF=0.321;AN=56;BaseQRankSum=6.398;DP=633;FS=7.102;HRun=2;HaplotypeScore=89.5975;InbreedingCoeff=0.5948;MQ=54.40;MQ0=51;MQRankSum=-7.550;QD=7.11;ReadPosRankSum=-1.874;VQSLOD=-0.0511;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:31,5:32:20.43:20,0,381	0/0:10,0:10:26.04:0,26,321	0/0:76,0:16:18.86:0,19,180	0/0:117,0:27:46.44:0,46,596	0/1:18,0:17:23.42:23,0,150	0/0:17,0:17:47.14:0,47,599	0/0:27,0:27:77.60:0,78,1028	1/1:12,8:17:46.59:481,47,0	0/0:18,1:19:21.01:0,21,471	0/0:16,0:16:44.51:0,45,588	0/0:14,0:14:31.87:0,32,429	0/0:17,0:17:48.92:0,49,624	0/0:20,0:20:53.53:0,54,720	0/0:15,0:15:38.45:0,38,507	0/0:25,0:25:42.56:0,43,520	0/0:18,0:18:44.50:0,44,575	0/0:11,0:11:23.84:0,24,320	0/1:10,5:15:37.15:37,0,284	1/1:10,1:9:18.77:201,19,0	1/1:2,3:5:3.01:38,3,0	1/1:9,3:8:1.25:3,1,0	0/0:25,0:24:61.71:0,62,772	0/0:9,3:10:15.11:0,15,198	0/1:18,4:21:17.19:17,0,260	0/0:17,0:17:37.85:0,38,481	1/1:7,9:14:34.80:369,35,0	1/1:8,6:13:15.44:127,15,0	1/1:7,1:6:14.45:128,14,0
chr10	69625017	.	G	GA	1683.44	PASS	AB=0.953;AC=18;AF=0.321;AN=56;BaseQRankSum=4.656;DP=632;FS=2.551;HRun=1;HaplotypeScore=88.4761;InbreedingCoeff=0.5942;MQ=54.23;MQ0=51;MQRankSum=-7.346;QD=9.51;ReadPosRankSum=-1.168;VQSLOD=0.8266;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:30,6:32:22.51:23,0,364	0/0:8,0:10:27.04:0,27,332	0/0:75,0:15:18.86:0,19,180	0/0:118,0:28:46.34:0,46,610	0/1:18,0:17:23.16:23,0,142	0/0:19,0:19:47.12:0,47,569	0/0:25,0:27:78.21:0,78,1007	1/1:11,8:16:40.84:520,41,0	0/0:17,0:19:32.26:0,32,487	0/0:14,0:15:45.12:0,45,588	0/0:13,0:14:33.07:0,33,429	0/0:15,0:17:50.14:0,50,623	0/0:19,0:19:54.14:0,54,701	0/0:13,0:14:39.06:0,39,497	0/0:13,0:24:23.44:0,23,404	0/0:16,0:18:45.11:0,45,574	0/0:11,0:11:23.84:0,24,320	0/1:15,0:15:37.46:37,0,274	1/1:3,8:9:20.08:311,20,0	1/1:4,2:6:3.01:38,3,0	1/1:4,7:8:1.25:3,1,0	0/0:22,0:24:63.11:0,63,791	0/0:12,0:10:15.47:0,15,194	0/1:21,1:21:53.98:54,0,260	0/0:16,0:17:39.06:0,39,490	1/1:11,6:15:36.11:478,36,0	1/1:8,3:12:15.04:184,15,0	1/1:3,5:6:15.04:200,15,0
chr10	69625022	.	GA	G	294.23	PASS	AB=0.759;AC=2;AF=0.036;AN=56;BaseQRankSum=3.412;DP=647;FS=2.144;HRun=1;HaplotypeScore=90.4146;InbreedingCoeff=-0.0464;MQ=50.18;MQ0=54;MQRankSum=-0.322;QD=5.35;ReadPosRankSum=-2.073;VQSLOD=-0.3153;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:32,6:34:64.55:291,0,65	0/0:11,0:11:22.98:0,23,291	0/0:78,0:12:18.01:0,18,196	0/0:113,0:20:38.85:0,39,504	0/1:8,9:16:31.58:92,0,32	0/0:19,0:19:49.96:0,50,709	0/0:30,0:30:86.09:0,86,1180	0/0:20,0:17:44.42:0,44,567	0/0:17,0:17:42.82:0,43,555	0/0:15,0:15:40.94:0,41,549	0/0:13,0:14:30.72:0,31,431	0/0:18,0:18:47.85:0,48,673	0/0:19,0:19:56:0,56,818	0/0:15,0:15:37.94:0,38,551	0/0:23,0:23:46.93:0,47,537	0/0:18,0:18:43.96:0,44,598	0/0:12,0:12:30.09:0,30,369	0/0:16,0:15:30.57:0,31,399	0/0:15,0:13:32.81:0,33,402	0/0:7,0:7:3:0,3,44	0/0:16,0:12:12.04:0,12,152	0/0:24,1:24:41.10:0,41,766	0/0:14,0:12:14.17:0,14,185	0/0:20,0:19:20.62:0,21,282	0/0:17,0:17:34.62:0,35,432	0/0:18,0:16:44.94:0,45,597	0/0:13,0:12:18.06:0,18,256	0/0:8,0:6:14.54:0,15,183
chr10	69625175	.	AAAAAAAAG	A	1326.15	PASS	AB=0.956;AC=7;AF=0.125;AN=56;BaseQRankSum=4.683;DP=603;FS=1.628;HRun=0;HaplotypeScore=135.2268;InbreedingCoeff=0.1848;MQ=54.67;MQ0=26;MQRankSum=-1.297;QD=9.27;ReadPosRankSum=-1.247;VQSLOD=2.4567;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:28:90.22:90,0,244	0/0:8,0:8:24.08:0,24,570	0/0:54,0:14:38.19:0,38,476	0/0:48,0:17:31:0,31,331	0/1:33,0:33:99:150,0,127	0/0:26,0:26:69.10:0,69,1379	0/0:16,0:16:28.23:0,28,899	0/0:25,0:23:41.35:0,41,693	0/0:24,0:24:66.14:0,66,1318	0/0:26,0:25:68.88:0,69,1299	0/0:26,0:26:69.18:0,69,1458	0/0:15,0:15:40.52:0,41,947	0/0:16,0:16:45.10:0,45,999	0/0:12,0:11:33.11:0,33,755	0/0:23,0:23:67.57:0,68,1462	0/0:21,0:20:54.16:0,54,1511	0/1:16,2:18:13.30:269,0,13	0/1:21,1:21:64.07:232,0,64	0/0:17,0:16:47.93:0,48,936	0/0:17,0:17:28.08:0,28,403	0/0:5,0:5:10.57:0,11,152	0/0:16,0:16:45.09:0,45,1080	0/1:22,2:24:19.54:400,0,20	1/1:17,0:17:27.38:321,27,0	0/0:16,0:15:41.45:0,41,925	0/0:28,0:27:70.54:0,71,1231	0/0:14,0:14:25.07:0,25,662	0/0:7,0:7:9.03:0,9,222
chr10	69627300	.	ATG	A	3054.29	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=4.704;DP=880;FS=5.221;HRun=0;HaplotypeScore=118.1373;InbreedingCoeff=0.9951;MQ=59.62;MQ0=8;MQRankSum=0.326;QD=27.03;ReadPosRankSum=3.255;VQSLOD=5.1288;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:51:99:0,132,2153	0/0:12,0:12:36.11:0,36,577	0/0:35,0:13:20.61:0,21,310	0/0:19,0:12:30.06:0,30,450	0/0:41,1:42:67.18:0,67,1658	0/0:17,0:17:51.17:0,51,841	0/0:32,0:32:78.27:0,78,1290	0/0:37,0:36:84.28:0,84,1366	0/0:27,0:27:69.23:0,69,1130	0/0:35,0:35:93.32:0,93,1554	0/0:33,0:33:84.27:0,84,1359	0/0:37,0:37:96.33:0,96,1598	0/0:36,0:36:99:0,102,1640	0/0:36,0:36:93.32:0,93,1532	0/0:45,0:45:99:0,120,1992	0/0:29,0:29:81.28:0,81,1349	1/1:5,25:30:69.22:878,69,0	1/1:4,16:20:16.13:434,16,0	0/0:21,0:21:57.19:0,57,943	0/0:37,0:37:93.29:0,93,1473	0/0:41,0:41:99:0,99,1604	0/0:25,0:25:57.18:0,57,907	1/1:2,28:30:78.25:986,78,0	1/1:4,29:32:72.23:916,72,0	0/0:34,0:34:87.77:0,88,1450	0/0:40,0:40:99:0,108,1756	0/0:28,0:27:84.29:0,84,1379	0/0:16,0:16:36.12:0,36,597
chr10	69628560	.	G	GT	11562.87	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=-18.714;DP=819;FS=3.048;HRun=1;HaplotypeScore=74.1032;InbreedingCoeff=1.0000;MQ=89.58;MQ0=0;MQRankSum=-2.913;QD=42.05;ReadPosRankSum=1.606;VQSLOD=5.3306;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:93.28:0,93,1190	0/0:12,0:12:36.10:0,36,452	0/0:32,0:32:86.17:0,86,1078	0/0:29,0:29:84.15:0,84,1045	0/0:26,0:26:78.25:0,78,1013	0/0:13,0:13:36.12:0,36,467	0/0:21,0:21:63.20:0,63,816	0/0:36,0:36:99:0,102,1325	0/0:39,0:39:99:0,117,1519	0/0:39,0:39:99:0,108,1390	0/0:21,0:21:63.20:0,63,818	0/0:49,0:49:99:0,147,1909	0/0:31,0:31:90.28:0,90,1153	0/0:27,0:27:78.25:0,78,1011	0/0:44,0:44:99:0,126,1636	0/0:39,0:39:99:0,117,1519	1/1:0,31:31:87.29:1304,87,0	1/1:1,16:17:48.16:719,48,0	1/1:0,20:20:60.18:876,60,0	1/1:2,27:30:81.23:1179,81,0	1/1:1,28:29:78.26:1169,78,0	0/0:33,0:33:99:0,99,1285	1/1:1,21:22:60.18:876,60,0	1/1:2,27:29:81.27:1214,81,0	0/0:22,0:22:66.19:0,66,841	1/1:0,41:41:99:1844,123,0	1/1:0,39:39:99:1707,114,0	1/1:0,17:17:45.15:674,45,0
chr10	69629362	.	A	AT	6736.10	PASS	AC=20;AF=0.357;AN=56;BaseQRankSum=3.085;DP=604;FS=1.448;HRun=6;HaplotypeScore=73.9297;InbreedingCoeff=0.9984;MQ=71.02;MQ0=0;MQRankSum=-6.468;QD=32.39;ReadPosRankSum=1.237;VQSLOD=5.0563;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:69.13:0,69,695	0/0:11,0:11:33.08:0,33,337	0/0:14,0:14:39.03:0,39,376	0/0:10,0:10:18.01:0,18,170	0/0:40,0:40:99:0,120,1217	0/0:27,0:27:75.17:0,75,765	0/0:14,0:14:42.10:0,42,428	0/0:34,0:34:96.21:0,96,974	0/0:13,0:13:39.07:0,39,390	0/0:31,0:31:81.18:0,81,822	0/0:30,0:30:87.20:0,87,887	0/0:23,0:23:66.15:0,66,673	0/0:19,0:19:48.09:0,48,482	0/0:21,0:21:60.13:0,60,612	0/0:16,0:16:45.07:0,45,446	0/0:28,0:28:78.16:0,78,789	1/1:1,15:16:39.12:491,39,0	1/1:1,15:16:42.13:528,42,0	1/1:6,16:22:54.16:667,54,0	1/1:3,32:35:99:1282,102,0	1/1:2,12:13:36.03:432,36,0	0/0:18,0:18:54.11:0,54,544	1/1:2,25:27:63.05:793,63,0	1/1:1,16:17:48.15:604,48,0	0/0:24,0:24:66.14:0,66,668	1/1:3,21:24:38.60:789,39,0	1/1:8,21:29:69.20:849,69,0	1/1:0,8:8:24.08:302,24,0
chr10	69629392	.	AT	A	4564.84	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=12.659;DP=612;FS=4.231;HRun=5;HaplotypeScore=92.4092;InbreedingCoeff=0.9990;MQ=70.73;MQ0=0;MQRankSum=-5.674;QD=31.70;ReadPosRankSum=-1.297;VQSLOD=4.6016;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:78.22:0,78,1017	0/0:9,0:9:27.09:0,27,369	0/0:12,0:12:33.09:0,33,425	0/0:10,0:10:27.06:0,27,333	0/0:39,0:39:99:0,111,1492	0/0:25,0:25:69.23:0,69,943	0/0:17,0:17:51.15:0,51,680	0/0:30,0:30:81.24:0,81,1055	0/0:14,0:14:39.10:0,39,501	0/0:27,0:27:81.25:0,81,1067	0/0:28,0:28:81.26:0,81,1094	0/0:23,0:23:69.23:0,69,944	0/0:17,0:17:45.14:0,45,600	0/0:26,0:26:75.23:0,75,995	0/0:21,0:21:60.18:0,60,790	0/0:20,0:20:57.19:0,57,780	0/0:15,0:15:33.11:0,33,451	0/0:14,0:14:39.13:0,39,529	1/1:1,26:27:78.19:865,78,0	1/1:0,33:33:96.21:1070,96,0	1/1:1,11:12:24.07:272,24,0	0/0:22,0:22:63.19:0,63,828	0/0:30,0:30:83.97:0,84,1096	0/0:17,0:17:51.17:0,51,696	0/0:24,0:24:72.24:0,72,984	1/1:3,21:24:69.17:764,69,0	1/1:2,26:28:84.24:949,84,0	1/1:1,19:20:57.16:645,57,0
chr10	69631250	.	G	GTA	13737.27	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-6.950;DP=667;FS=8.899;HRun=0;HaplotypeScore=78.8135;InbreedingCoeff=0.9820;MQ=67.27;MQ0=2;MQRankSum=-1.089;QD=40.76;ReadPosRankSum=0.492;VQSLOD=6.4208;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,22:26:57.20:996,57,0	0/0:8,0:8:24.08:0,24,325	0/0:4,0:5:6.02:0,6,80	0/0:10,0:10:13.23:0,13,107	1/1:2,25:27:66.22:1138,66,0	0/0:25,0:25:66.22:0,66,891	0/0:11,0:10:33.11:0,33,445	1/1:4,42:46:99:2068,126,0	0/0:24,0:24:72.23:0,72,957	0/0:38,0:38:99:0,111,1501	0/0:21,0:21:57.19:0,57,770	0/0:18,0:18:51.16:0,51,673	0/0:32,0:32:93.24:0,93,1191	0/0:24,0:24:60.17:0,60,792	0/0:24,0:24:66.20:0,66,876	0/0:27,0:27:81.25:0,81,1078	1/1:1,22:23:60.20:1036,60,0	1/1:0,23:24:51.17:894,51,0	1/1:1,11:14:36.11:591,36,0	1/1:3,32:35:78.27:1367,78,0	1/1:1,19:22:39.13:683,39,0	0/0:34,0:34:90.28:0,90,1201	1/1:5,29:33:72.25:1262,72,0	1/1:2,18:20:45.15:788,45,0	0/0:29,0:29:75.22:0,75,981	1/1:3,28:29:81.26:1390,81,0	1/1:3,18:21:48.16:841,48,0	1/1:0,14:14:39.13:684,39,0
chr10	69631372	.	T	TGCATGTGCGCG	2990.89	PASS	AB=1.000;AC=10;AF=0.185;AN=54;BaseQRankSum=5.661;DP=505;FS=0.000;HRun=0;HaplotypeScore=184.3025;InbreedingCoeff=0.6946;MQ=67.34;MQ0=3;MQRankSum=-7.461;QD=32.87;ReadPosRankSum=-3.715;VQSLOD=2.7055;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:13,1:21:0.47:0,0,2	0/0:13,0:13:30.10:0,30,955	0/0:21,0:13:39.13:0,39,1145	0/0:33,0:26:69.23:0,69,2038	0/0:15,0:22:2.51:0,3,7	0/0:16,0:16:45.09:0,45,1245	0/0:14,0:14:38.34:0,38,1025	1/1:26,0:25:54.38:1173,54,0	0/0:17,0:17:41.85:0,42,1429	0/0:21,0:21:50.34:0,50,1421	0/0:8,0:8:21.07:0,21,714	0/0:9,0:9:24.04:0,24,810	0/0:25,0:25:63.20:0,63,1961	0/0:26,0:25:66.20:0,66,2069	0/0:17,0:17:48.16:0,48,1607	0/0:25,0:25:63.22:0,63,1904	0/0:31,0:31:50.14:0,50,942	0/1:12,0:12:5.47:5,0,577	0/1:17,0:16:18.46:497,0,18	./.	0/0:12,0:12:0.47:0,0,1	0/0:21,0:21:63.19:0,63,1970	0/0:10,0:10:21.02:0,21,559	0/0:23,0:21:24.04:0,24,658	0/0:22,0:22:51.16:0,51,1661	1/1:14,0:14:33.03:600,33,0	1/1:9,0:9:11.92:184,12,0	1/1:13,0:13:39.13:690,39,0
chr10	69631374	.	C	CATGT	2030.30	PASS	AB=1.000;AC=9;AF=0.180;AN=50;BaseQRankSum=0.565;DP=473;FS=0.000;HRun=0;HaplotypeScore=100.0957;InbreedingCoeff=0.7765;MQ=67.82;MQ0=4;MQRankSum=-5.227;QD=34.41;ReadPosRankSum=-2.980;VQSLOD=3.1124;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:0.47:0,0,1	0/0:11,0:11:30.10:0,30,579	0/0:22,0:13:39.03:0,39,700	0/0:32,0:25:51.35:0,51,1141	./.	0/0:17,0:17:34.95:0,35,764	0/0:14,0:14:23.32:0,23,629	0/1:10,0:9:24.98:175,0,25	0/0:18,0:18:41.89:0,42,830	0/0:24,0:23:50.53:0,51,862	0/0:7,0:7:21.07:0,21,421	0/0:9,0:9:24.08:0,24,490	0/0:24,0:24:62.24:0,62,1182	0/0:25,0:24:66.20:0,66,1256	0/0:18,0:18:48.16:0,48,977	0/0:24,0:24:66.17:0,66,1204	0/0:32,0:32:11.20:0,11,483	0/0:14,0:14:4.99:0,5,307	1/1:3,11:14:20.40:676,20,0	./.	./.	0/0:21,0:21:61.98:0,62,1182	0/0:12,0:12:10.40:0,10,319	0/0:17,0:24:20.95:0,21,406	0/0:22,0:22:51.16:0,51,964	1/1:0,11:12:27.09:564,27,0	1/1:7,2:9:12.04:214,12,0	1/1:12,1:13:30.10:556,30,0
chr10	69631376	.	CGT	C	94.61	PASS	AB=0.901;AC=14;AF=0.269;AN=52;BaseQRankSum=2.672;DP=501;FS=0.991;HRun=0;HaplotypeScore=82.9699;InbreedingCoeff=-0.0921;MQ=63.88;MQ0=6;MQRankSum=1.249;QD=0.43;ReadPosRankSum=0.218;VQSLOD=1.6658;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:19:2.91:23,3,0	0/1:10,2:12:51.93:52,0,122	0/0:23,0:12:3.01:0,3,37	0/0:32,0:23:3.01:0,3,34	1/1:8,0:8:2.99:24,3,0	0/1:15,1:16:9.96:10,0,237	0/1:14,0:15:5.59:6,0,254	./.	0/1:17,3:21:20.12:20,0,266	0/1:24,4:27:24.31:24,0,277	0/0:8,0:8:6.01:0,6,70	0/0:9,0:9:12.04:0,12,180	0/1:21,5:26:15.44:15,0,153	0/0:27,0:26:11.17:0,11,334	0/0:20,0:20:30.01:0,30,367	0/1:22,3:25:0.43:0,0,394	0/0:16,0:37:20.75:0,21,186	0/0:9,0:15:6.01:0,6,67	0/0:12,0:11:2.80:0,3,13	./.	0/1:9,0:9:0:0,0,0	0/1:21,1:21:12.45:12,0,224	0/0:11,0:17:4.55:0,5,30	0/0:25,0:24:3.48:0,3,42	0/1:16,4:21:35.62:36,0,79	0/0:10,0:10:10.39:0,10,43	0/0:9,0:9:2.50:0,2,9	0/0:13,0:13:2.37:0,2,8
chr10	69631378	.	T	TGCGCGC	917.81	PASS	AB=1.000;AC=17;AF=0.315;AN=54;BaseQRankSum=9.142;DP=512;FS=7.582;HRun=0;HaplotypeScore=134.1137;InbreedingCoeff=0.4584;MQ=60.56;MQ0=7;MQRankSum=-7.227;QD=5.67;ReadPosRankSum=-1.124;VQSLOD=1.1597;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:20:5.79:46,6,0	0/0:12,0:12:27.09:0,27,571	0/0:25,0:12:33.11:0,33,742	0/0:32,0:21:63.02:0,63,1150	1/1:9,0:9:2.45:23,2,0	0/0:16,0:16:42.07:0,42,782	0/0:16,0:16:15.31:0,15,641	0/1:12,0:11:2.53:47,0,3	0/0:22,0:22:44.04:0,44,922	0/0:28,0:27:51.14:0,51,1078	0/0:8,0:8:24.07:0,24,493	0/0:11,0:11:27.08:0,27,577	0/0:27,0:27:63.14:0,63,1173	0/0:29,0:28:44.27:0,44,1242	0/0:21,0:21:54.08:0,54,1068	0/0:24,0:24:54.15:0,54,1174	0/1:39,0:38:99:104,0,386	0/1:15,0:15:8.57:9,0,343	0/1:12,0:11:30.99:111,0,31	./.	1/1:8,1:9:0.47:1,0,0	0/0:24,0:23:63.15:0,63,1219	0/1:17,0:17:27.96:28,0,224	0/0:27,0:25:18:0,18,330	0/0:21,0:21:42.13:0,42,950	1/1:7,2:10:4.73:281,5,0	1/1:7,2:9:5.56:110,6,0	1/1:9,1:10:26.93:321,27,0
chr10	69632287	.	T	TCAC	6130.11	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=12.349;DP=784;FS=5.917;HRun=0;HaplotypeScore=115.1499;InbreedingCoeff=1.0000;MQ=82.17;MQ0=0;MQRankSum=-4.710;QD=56.76;ReadPosRankSum=2.327;VQSLOD=6.7192;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,108,1898	0/0:15,0:15:45.15:0,45,794	0/0:35,0:35:99:0,99,1599	0/0:19,0:20:54.18:0,54,901	0/0:22,0:22:66.23:0,66,1154	0/0:33,0:33:96.31:0,96,1659	0/0:23,0:23:66.20:0,66,1099	0/0:35,0:35:96.33:0,96,1683	0/0:14,0:14:42.12:0,42,711	0/0:31,0:31:90.30:0,90,1542	0/0:28,0:28:84.29:0,84,1482	0/0:36,0:36:99:0,105,1824	0/0:27,0:27:81.28:0,81,1428	0/0:31,0:31:87.30:0,87,1534	0/0:28,0:27:84.29:0,84,1476	0/0:27,0:27:78.24:0,78,1316	1/1:2,21:23:57.15:1294,57,0	1/1:3,22:25:63.22:1489,63,0	0/0:28,0:28:84.25:0,84,1423	0/0:43,0:43:99:0,126,2159	0/0:26,0:26:72.25:0,72,1270	0/0:39,0:39:99:0,117,1999	1/1:6,23:30:69.19:1598,69,0	1/1:3,26:29:75.26:1750,75,0	0/0:24,0:24:72.24:0,72,1243	0/0:27,0:27:81.25:0,81,1351	0/0:32,0:32:87.30:0,87,1535	0/0:14,0:14:42.12:0,42,683
chr10	69633694	.	CA	C	1884.97	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=10.277;DP=670;FS=3.219;HRun=3;HaplotypeScore=80.5445;InbreedingCoeff=0.9996;MQ=87.46;MQ0=0;MQRankSum=-4.752;QD=33.07;ReadPosRankSum=1.911;VQSLOD=4.1545;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,33:33:96.30:1190,96,0	0/0:10,0:10:30.10:0,30,432	0/0:26,0:26:72.22:0,72,998	0/0:20,0:20:51.08:0,51,645	1/1:1,23:24:66.21:817,66,0	0/0:19,0:19:57.19:0,57,820	0/0:21,0:21:63.19:0,63,888	0/0:28,0:28:84.27:0,84,1178	0/0:25,0:25:75.25:0,75,1076	0/0:38,0:38:99:0,114,1591	0/0:18,0:18:54.17:0,54,760	0/0:23,0:23:69.23:0,69,992	0/0:28,0:28:84.28:0,84,1210	0/0:14,0:14:42.14:0,42,605	0/0:30,0:30:87.29:0,87,1252	0/0:31,0:31:93.31:0,93,1339	0/0:28,0:28:84.28:0,84,1206	0/0:17,0:17:51.09:0,51,688	0/0:26,0:26:78.24:0,78,1087	0/0:23,0:23:66.21:0,66,932	0/0:27,0:27:78.23:0,78,1071	0/0:28,0:28:81.27:0,81,1167	0/0:21,0:21:60.20:0,60,861	0/0:23,0:23:66.21:0,66,932	0/0:23,0:23:66.21:0,66,934	0/0:24,0:24:69.23:0,69,994	0/0:30,0:29:78.26:0,78,1121	0/0:12,0:12:36.12:0,36,518
chr10	69635833	.	AGG	A	120.88	PASS	AC=4;AF=0.074;AN=54;BaseQRankSum=3.452;DP=234;FS=10.776;HRun=7;HaplotypeScore=33.0493;InbreedingCoeff=0.6959;MQ=48.70;MQ0=7;MQRankSum=-3.683;QD=13.43;ReadPosRankSum=0.045;VQSLOD=-0.3808;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,3:3:6.02:76,6,0	0/0:5,0:4:12.04:0,12,210	./.	0/0:12,0:2:2.99:0,3,23	1/1:1,5:5:12.04:149,12,0	0/0:10,0:10:27.05:0,27,440	0/0:5,0:5:12.04:0,12,210	0/0:11,0:8:18.04:0,18,200	0/0:4,0:5:15.05:0,15,239	0/0:9,0:9:24.08:0,24,419	0/0:8,0:8:24.08:0,24,420	0/0:4,0:4:12:0,12,177	0/0:7,0:7:18.06:0,18,315	0/0:3,0:3:9.03:0,9,157	0/0:10,0:10:21.07:0,21,349	0/0:5,0:5:9.03:0,9,157	0/0:10,0:12:33.10:0,33,531	0/0:12,0:12:33.10:0,33,549	0/0:9,0:9:27.05:0,27,296	0/0:16,0:16:42.11:0,42,516	0/0:8,0:8:18.05:0,18,216	0/0:8,0:8:18.06:0,18,315	0/0:9,0:8:18.06:0,18,314	0/0:2,0:2:6.02:0,6,105	0/0:8,0:8:21.06:0,21,340	0/0:11,0:11:30.09:0,30,360	0/0:10,0:10:21.06:0,21,255	0/0:13,0:12:33.10:0,33,387
chr10	69635911	.	AAAAT	A	1097.70	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=8.318;DP=285;FS=16.706;HRun=0;HaplotypeScore=52.0447;InbreedingCoeff=0.5064;MQ=55.81;MQ0=5;MQRankSum=-7.195;QD=26.14;ReadPosRankSum=-0.502;VQSLOD=1.6575;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,5:9:1.06:284,1,0	0/0:7,0:7:21.07:0,21,433	0/0:12,0:5:12.03:0,12,255	0/1:11,0:3:18.17:18,0,30	1/1:2,20:22:57.04:910,57,0	0/0:10,0:10:27.05:0,27,565	0/0:5,0:5:15.04:0,15,326	0/0:19,0:19:51.12:0,51,999	0/0:3,0:3:9.03:0,9,217	0/0:13,0:13:36.12:0,36,847	0/0:13,0:13:36.12:0,36,824	0/0:8,0:8:24.08:0,24,547	0/0:7,0:7:21.07:0,21,500	0/0:7,0:7:18.06:0,18,411	0/0:7,0:7:21.07:0,21,502	0/0:6,0:6:18.05:0,18,399	0/0:20,0:20:60.19:0,60,1302	0/0:15,0:15:36.12:0,36,774	0/0:13,0:11:30.10:0,30,660	0/0:7,0:7:21.07:0,21,478	0/0:3,0:3:6.02:0,6,150	0/0:3,0:3:6.01:0,6,77	0/0:6,0:4:12.04:0,12,276	0/0:2,0:2:3.01:0,3,75	0/0:22,0:22:66.22:0,66,1517	0/0:10,0:10:27.06:0,27,479	0/0:18,0:17:54.17:0,54,1227	0/0:7,0:7:21.02:0,21,390
chr10	69638702	.	AT	A	2130.67	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=9.090;DP=681;FS=0.418;HRun=9;HaplotypeScore=84.9588;InbreedingCoeff=0.9900;MQ=77.69;MQ0=0;MQRankSum=-4.711;QD=22.43;ReadPosRankSum=-2.750;VQSLOD=3.1348;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,24:27:69.04:632,69,0	0/0:5,0:5:15.04:0,15,173	0/0:19,0:19:42.66:0,43,467	0/0:15,0:15:23.01:0,23,209	1/1:0,25:25:72.04:659,72,0	0/0:28,0:28:63.15:0,63,704	0/0:17,0:17:45.13:0,45,519	1/1:6,37:43:99:983,108,0	0/0:22,0:22:57.17:0,57,658	0/0:36,1:37:71.82:0,72,1081	0/0:19,0:19:57.16:0,57,650	0/0:37,0:37:99:0,105,1212	0/0:35,0:35:96.27:0,96,1097	0/0:22,0:22:60.18:0,60,692	0/0:24,0:24:66.20:0,66,762	0/0:26,0:26:72.21:0,72,831	0/0:23,0:23:66.18:0,66,752	0/0:15,0:15:39.12:0,39,450	0/0:17,0:17:45.12:0,45,510	0/0:32,0:32:90.25:0,90,1028	0/0:24,0:24:63.17:0,63,716	0/0:29,0:29:84.23:0,84,951	0/0:24,0:24:69.20:0,69,788	0/0:18,0:18:45.13:0,45,519	0/0:27,2:29:26.29:0,26,801	0/0:40,1:41:89.89:0,90,1280	0/0:22,0:21:57.17:0,57,658	0/0:5,0:6:17.85:0,18,165
chr10	69639176	.	AAAAACAAAACAAAAC	A	4458.52	PASS	AB=0.913;AC=23;AF=0.426;AN=54;BaseQRankSum=9.611;DP=640;FS=4.781;HRun=0;HaplotypeScore=268.1854;InbreedingCoeff=0.7406;MQ=69.79;MQ0=3;MQRankSum=-6.095;QD=17.83;ReadPosRankSum=0.618;VQSLOD=2.6706;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:26,0:29:67.81:134,0,68	0/0:9,0:9:12.02:0,12,530	./.	0/0:30,0:21:2.69:0,3,8	1/1:8,0:23:18.06:627,18,0	0/0:29,0:29:63.21:0,63,3975	0/0:16,0:16:18.04:0,18,868	0/1:22,0:22:0:0,0,0	0/0:24,0:24:51.16:0,51,2911	0/0:32,0:32:57.19:0,57,3742	0/0:23,0:23:33.10:0,33,1661	0/0:26,0:26:42.13:0,42,2756	0/0:22,0:22:30.08:0,30,1816	0/0:25,0:25:36.12:0,36,2176	0/0:35,0:35:54.19:0,54,3084	0/0:42,0:42:72.23:0,72,4418	0/1:16,0:20:0.03:100,0,0	1/1:9,0:13:3.01:105,3,0	1/1:12,5:17:15.05:485,15,0	1/1:12,10:22:21.03:628,21,0	1/1:14,0:14:3.01:65,3,0	0/0:27,0:27:36.12:0,36,2348	1/1:10,0:19:17.99:509,18,0	1/1:18,0:18:5.27:21,5,0	0/0:16,0:26:27.09:0,27,800	1/1:20,11:31:33.10:1091,33,0	1/1:13,6:17:9.03:324,9,0	1/1:0,3:3:9.03:371,9,0
chr10	69639374	.	C	CTGTG	3174.47	PASS	AB=0.583;AC=25;AF=0.446;AN=56;BaseQRankSum=13.574;DP=695;FS=6.462;HRun=0;HaplotypeScore=159.6675;InbreedingCoeff=0.8924;MQ=62.32;MQ0=8;MQRankSum=-3.507;QD=9.77;ReadPosRankSum=-1.370;VQSLOD=2.0686;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:23,0:36:21.78:162,22,0	0/0:12,0:12:33.11:0,33,542	0/0:37,0:24:14.30:0,14,366	0/0:19,0:11:11.98:0,12,145	1/1:4,1:23:46.92:271,47,0	0/0:33,0:33:78.26:0,78,1272	0/0:13,0:13:24.08:0,24,394	1/1:34,0:33:33.10:558,33,0	0/0:24,0:24:51.15:0,51,789	0/0:32,0:32:72.23:0,72,1142	0/0:19,0:21:51.15:0,51,768	0/0:16,0:16:42.14:0,42,688	0/0:24,0:24:48.16:0,48,783	0/0:26,0:26:63.16:0,63,951	0/0:33,0:33:69.21:0,69,1085	0/0:24,0:24:51.16:0,51,814	1/1:5,0:26:26.22:178,26,0	1/1:10,0:22:38.72:245,39,0	1/1:14,0:16:9.03:147,9,0	1/1:22,1:27:8.86:156,9,0	1/1:23,0:23:11.87:207,12,0	0/0:17,0:17:36.11:0,36,567	1/1:6,0:26:43.47:197,43,0	0/1:6,0:21:16.07:103,0,16	0/0:38,0:38:96.30:0,96,1523	1/1:26,0:31:34.79:508,35,0	1/1:13,0:20:30.57:523,31,0	1/1:14,0:16:9.03:141,9,0
chr10	69640646	.	AG	A	2008.89	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.418;DP=697;FS=1.617;HRun=3;HaplotypeScore=70.7865;InbreedingCoeff=0.9483;MQ=85.10;MQ0=0;MQRankSum=-4.436;QD=29.54;ReadPosRankSum=-0.489;VQSLOD=2.9422;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,38:38:93.29:1153,93,0	0/0:11,0:11:33.07:0,33,436	0/0:23,0:23:40.79:0,41,822	0/0:23,0:23:48.52:0,49,753	1/1:0,30:30:81.19:978,81,0	0/0:30,0:30:87.29:0,87,1253	0/0:27,0:27:78.24:0,78,1100	0/0:38,0:38:99:0,102,1419	0/0:21,0:21:63.19:0,63,884	0/0:24,0:24:69.23:0,69,993	0/0:17,0:17:48.16:0,48,690	0/0:36,0:36:99:0,105,1491	0/0:33,0:33:96.29:0,96,1341	0/0:24,0:24:72.22:0,72,1002	0/0:33,0:33:99:0,99,1406	0/0:33,0:33:99:0,99,1424	0/0:27,0:27:78.26:0,78,1122	0/0:24,0:24:69.23:0,69,987	0/0:21,0:21:63.21:0,63,890	0/0:18,0:18:48.15:0,48,663	0/0:33,0:33:99:0,99,1424	0/0:15,0:15:42.14:0,42,605	0/0:13,0:13:36.12:0,36,518	0/0:32,0:32:90.30:0,90,1295	0/0:13,0:13:39.13:0,39,560	0/0:22,0:22:66.21:0,66,933	0/0:35,0:35:99:0,102,1448	0/0:3,0:3:6.02:0,6,86
chr10	69643459	.	GA	G	2020.36	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.701;DP=689;FS=0.000;HRun=2;HaplotypeScore=61.6353;InbreedingCoeff=0.9994;MQ=92.65;MQ0=0;MQRankSum=-4.908;QD=33.67;ReadPosRankSum=3.334;VQSLOD=3.7985;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,33:34:93.30:1208,93,0	0/0:13,0:13:39.13:0,39,585	0/0:30,0:30:81.27:0,81,1199	0/0:27,0:27:81.26:0,81,1166	1/1:0,26:26:72.23:934,72,0	0/0:22,0:22:63.21:0,63,944	0/0:17,0:17:51.17:0,51,765	0/0:38,0:38:99:0,114,1709	0/0:17,0:17:51.17:0,51,754	0/0:32,0:32:96.33:0,96,1439	0/0:22,0:22:66.21:0,66,969	0/0:29,0:29:87.28:0,87,1284	0/0:25,0:25:75.25:0,75,1124	0/0:21,0:21:63.21:0,63,942	0/0:27,0:27:81.24:0,81,1157	0/0:36,0:36:99:0,108,1616	0/0:24,0:24:72.23:0,72,1059	0/0:21,0:21:63.21:0,63,944	0/0:23,0:23:63.17:0,63,899	0/0:33,0:33:99:0,99,1458	0/0:21,0:21:63.18:0,63,901	0/0:16,0:16:48.16:0,48,720	0/0:20,0:20:60.18:0,60,866	0/0:34,0:34:99:0,99,1420	0/0:30,0:30:87.29:0,87,1286	0/0:17,0:17:51.17:0,51,764	0/0:25,0:25:72.24:0,72,1079	0/0:9,0:9:27.09:0,27,405
chr10	69643914	.	AAC	A	369.71	PASS	AB=0.895;AC=15;AF=0.300;AN=50;BaseQRankSum=4.906;DP=633;FS=1.608;HRun=0;HaplotypeScore=80.1788;InbreedingCoeff=0.2914;MQ=70.96;MQ0=3;MQRankSum=0.332;QD=1.52;ReadPosRankSum=1.221;VQSLOD=1.6963;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:18,1:21:10.51:65,11,0	0/0:10,0:10:15.05:0,15,203	./.	./.	1/1:11,0:18:11.32:55,11,0	0/0:15,0:26:24.04:0,24,285	0/0:31,0:33:30.03:0,30,324	./.	0/0:11,0:11:15.01:0,15,177	0/1:24,0:29:8.90:9,0,118	0/1:10,1:11:20.14:20,0,81	0/0:20,0:20:20.99:0,21,244	0/0:21,0:20:13.51:0,14,170	0/1:23,5:28:37.24:37,0,253	0/1:27,1:29:85.36:103,0,85	0/0:30,4:34:9.78:0,10,412	0/0:38,0:42:22.63:0,23,641	0/0:18,0:18:30.04:0,30,365	0/0:17,0:16:18.02:0,18,205	0/0:24,0:24:24.04:0,24,278	0/0:27,0:27:36.02:0,36,390	0/1:26,3:29:11.12:11,0,196	1/1:11,2:13:8.75:96,9,0	1/1:17,9:27:11.86:110,12,0	0/1:16,5:21:8.12:8,0,240	0/1:18,0:18:18.73:19,0,90	0/0:16,0:20:18.03:0,18,226	0/0:11,0:13:9.02:0,9,113
chr10	69644275	.	G	GTA	7267.61	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-15.031;DP=820;FS=3.398;HRun=0;HaplotypeScore=101.0392;InbreedingCoeff=0.9677;MQ=86.08;MQ0=2;MQRankSum=-0.713;QD=41.53;ReadPosRankSum=-2.517;VQSLOD=5.7105;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,141,1876	0/0:13,0:13:33.11:0,33,439	0/0:29,0:29:54.15:0,54,685	0/0:29,0:29:57.21:0,57,799	0/0:22,0:22:54.15:0,54,687	0/0:24,0:24:69.21:0,69,903	0/0:30,0:30:81.25:0,81,1062	1/1:3,35:38:99:1758,105,0	0/0:38,0:38:99:0,102,1356	0/0:31,0:31:84.27:0,84,1105	0/0:19,0:19:45.13:0,45,583	0/0:36,0:36:90.30:0,90,1197	0/0:40,0:40:99:0,111,1458	0/0:44,0:44:99:0,126,1631	0/0:44,0:44:99:0,126,1660	0/0:47,0:47:99:0,132,1725	0/0:28,0:28:81.25:0,81,1061	0/0:16,0:16:48.16:0,48,638	1/1:4,16:19:42.14:705,42,0	1/1:1,27:29:75.26:1293,75,0	1/1:4,25:28:66.23:1143,66,0	0/0:35,0:35:87.22:0,87,1106	0/0:26,0:26:72.24:0,72,958	0/0:23,0:23:69.21:0,69,903	0/0:19,0:19:54.16:0,54,703	1/1:3,18:22:57.15:928,57,0	1/1:3,31:32:81.28:1388,81,0	1/1:0,2:3:3.01:52,3,0
chr10	69646564	.	T	TGCC	15330.62	PASS	AB=0.528;AC=25;AF=0.446;AN=56;BaseQRankSum=17.745;DP=609;FS=3.552;HRun=0;HaplotypeScore=122.1756;InbreedingCoeff=0.9251;MQ=89.93;MQ0=0;MQRankSum=-9.130;QD=61.08;ReadPosRankSum=3.254;VQSLOD=6.3544;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,25:26:63.22:1465,63,0	0/0:11,0:11:33.10:0,33,583	0/0:31,0:30:83.89:0,84,1302	0/0:19,0:19:54.16:0,54,897	1/1:0,23:23:63.17:1456,63,0	0/0:26,0:26:75.22:0,75,1305	0/0:28,0:28:84.27:0,84,1499	1/1:0,23:25:75.23:1587,75,0	0/0:18,0:18:51.15:0,51,888	0/0:29,0:29:84.28:0,84,1510	0/0:18,0:18:54.17:0,54,974	0/0:24,0:24:69.22:0,69,1215	0/0:31,0:31:93.30:0,93,1673	0/0:24,0:24:72.25:0,72,1334	0/0:30,0:29:90.29:0,90,1605	0/0:27,0:26:78.26:0,78,1424	1/1:0,23:23:66.23:1535,66,0	1/1:1,18:19:51.18:1188,51,0	1/1:0,7:9:24.07:519,24,0	1/1:0,19:21:57.20:1319,57,0	1/1:0,14:14:29.77:698,30,0	0/0:26,0:26:78.26:0,78,1423	1/1:0,18:19:54.19:1250,54,0	1/1:0,24:25:69.24:1567,69,0	0/0:16,0:16:48.14:0,48,853	0/1:2,17:19:54.66:1118,0,55	1/1:1,21:23:57.17:1279,57,0	1/1:0,5:5:15.05:348,15,0
chr10	69647093	.	CAG	C	4280.89	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=13.001;DP=746;FS=4.244;HRun=0;HaplotypeScore=86.6235;InbreedingCoeff=0.9953;MQ=68.18;MQ0=1;MQRankSum=0.876;QD=41.16;ReadPosRankSum=4.280;VQSLOD=6.7058;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,129,2379	0/0:10,0:10:30.10:0,30,569	0/0:15,0:14:38.20:0,38,618	0/0:14,0:13:33.06:0,33,501	0/0:31,0:31:93.26:0,93,1648	0/0:27,0:26:78.25:0,78,1439	0/0:23,0:23:69.17:0,69,1168	0/0:29,0:29:87.28:0,87,1586	0/0:25,0:25:72.25:0,72,1368	0/0:37,0:37:99:0,111,2073	0/0:22,0:22:66.21:0,66,1230	0/0:30,0:30:87.28:0,87,1632	0/0:31,0:31:90.29:0,90,1676	0/0:36,0:36:99:0,108,2056	0/0:34,0:34:99:0,99,1808	0/0:30,0:30:87.27:0,87,1613	1/1:0,31:30:75.25:1147,75,0	1/1:0,16:16:45.15:688,45,0	0/0:17,0:17:51.17:0,51,955	0/0:28,0:28:81.26:0,81,1472	0/0:39,0:39:99:0,114,2190	0/0:26,0:26:78.27:0,78,1486	1/1:1,27:28:81.17:1208,81,0	1/1:0,29:29:81.28:1238,81,0	0/0:22,0:22:66.21:0,66,1218	0/0:35,0:35:99:0,102,1922	0/0:32,0:32:96.30:0,96,1774	0/0:5,0:5:15.03:0,15,255
chr10	69648722	.	T	TC	6249.43	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=-6.873;DP=660;FS=4.767;HRun=6;HaplotypeScore=87.0345;InbreedingCoeff=0.9992;MQ=85.63;MQ0=0;MQRankSum=-6.246;QD=26.04;ReadPosRankSum=-0.570;VQSLOD=4.5856;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:19,0:39:71.18:402,71,0	0/0:10,0:10:30.03:0,30,296	0/0:22,0:22:45.10:0,45,524	0/0:24,0:24:59.99:0,60,563	1/1:11,0:32:59.54:308,60,0	0/0:29,0:29:84.15:0,84,844	0/0:20,0:20:54.12:0,54,551	1/1:2,23:25:63.12:733,63,0	0/0:11,0:11:30.06:0,30,306	0/0:24,0:23:63.14:0,63,643	0/0:19,0:19:45.09:0,45,452	0/0:31,0:31:81.18:0,81,825	0/0:31,0:31:87.20:0,87,887	0/0:25,0:25:72.15:0,72,727	0/0:32,0:32:84.18:0,84,857	0/0:26,0:26:72.16:0,72,734	0/0:16,0:16:48.09:0,48,481	0/0:13,0:13:36.08:0,36,367	1/1:2,21:23:63.19:778,63,0	1/1:1,28:29:84.27:1054,84,0	1/1:1,29:30:75.24:944,75,0	0/0:26,0:26:69.14:0,69,696	0/0:20,0:20:51.11:0,51,520	0/0:20,0:20:51.12:0,51,520	0/0:21,0:21:60.13:0,60,606	1/1:2,25:28:44.61:861,45,0	1/1:2,25:26:72.23:906,72,0	1/1:0,7:7:21.07:264,21,0
chr10	69648762	.	C	CA	1772.87	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.668;DP=682;FS=8.994;HRun=2;HaplotypeScore=90.6092;InbreedingCoeff=0.9954;MQ=89.74;MQ0=0;MQRankSum=-4.049;QD=26.86;ReadPosRankSum=-0.809;VQSLOD=2.2689;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,29:33:72.24:1035,72,0	0/0:12,0:12:36.11:0,36,446	0/0:29,0:29:69.21:0,69,913	0/0:23,0:23:54.99:0,55,600	1/1:7,26:33:63.13:860,63,0	0/0:32,0:32:96.27:0,96,1163	0/0:14,0:14:36.11:0,36,446	0/0:43,0:43:99:0,126,1511	0/0:11,0:11:30.08:0,30,358	0/0:27,0:26:75.21:0,75,905	0/0:19,0:19:54.17:0,54,664	0/0:23,0:23:69.18:0,69,829	0/0:30,0:30:87.24:0,87,1053	0/0:24,0:24:72.23:0,72,891	0/0:39,0:39:99:0,114,1413	0/0:28,0:28:81.25:0,81,1004	0/0:18,0:18:54.17:0,54,670	0/0:15,0:15:39.12:0,39,479	0/0:23,0:23:66.17:0,66,784	0/0:23,0:23:66.19:0,66,805	0/0:32,0:32:87.27:0,87,1077	0/0:23,0:23:69.22:0,69,855	0/0:26,0:26:75.22:0,75,916	0/0:21,0:21:63.20:0,63,779	0/0:15,0:15:42.11:0,42,506	0/0:33,0:32:96.27:0,96,1154	0/0:27,0:27:81.21:0,81,964	0/0:6,0:6:18.06:0,18,223
chr10	69649580	.	CGAGG	C	3473.98	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=11.348;DP=739;FS=8.862;HRun=0;HaplotypeScore=123.7694;InbreedingCoeff=0.9999;MQ=83.80;MQ0=0;MQRankSum=-6.112;QD=51.09;ReadPosRankSum=2.859;VQSLOD=4.7303;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,40:40:99:2074,99,0	0/0:12,0:12:36.10:0,36,919	0/0:21,0:21:60.20:0,60,1612	0/0:25,0:25:46.92:0,47,1419	1/1:0,28:28:69.17:1400,69,0	0/0:28,0:28:84.29:0,84,2403	0/0:33,0:33:99:0,99,2864	0/0:28,0:28:84.28:0,84,2343	0/0:22,0:22:63.22:0,63,1824	0/0:42,0:42:99:0,123,3456	0/0:20,0:20:57.20:0,57,1592	0/0:26,0:26:78.27:0,78,2259	0/0:33,0:33:99:0,99,2568	0/0:29,0:29:87.30:0,87,2527	0/0:35,0:35:99:0,105,2998	0/0:29,0:28:87.30:0,87,2518	0/0:24,0:24:72.25:0,72,2008	0/0:19,0:19:57.20:0,57,1654	0/0:25,0:25:69.24:0,69,1984	0/0:30,0:30:90.31:0,90,2604	0/0:26,0:26:78.27:0,78,2260	0/0:29,0:29:87.30:0,87,2518	0/0:23,0:23:69.24:0,69,1957	0/0:16,0:16:48.16:0,48,1390	0/0:27,0:27:81.24:0,81,2236	0/0:32,0:32:96.29:0,96,2676	0/0:19,0:19:57.20:0,57,1608	0/0:18,0:18:54.19:0,54,1568
chr10	69650117	.	C	CTTT	3801.99	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=12.869;DP=605;FS=1.576;HRun=9;HaplotypeScore=102.7453;InbreedingCoeff=0.9445;MQ=80.11;MQ0=0;MQRankSum=-0.223;QD=15.91;ReadPosRankSum=-3.307;VQSLOD=0.7923;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,0:40:73.46:571,73,0	0/0:8,0:8:21.06:0,21,265	0/1:24,0:23:2.57:3,0,248	0/0:17,0:15:19.89:0,20,219	1/1:3,1:29:67.03:579,67,0	0/0:30,0:30:84.26:0,84,1061	0/0:20,0:20:57.16:0,57,705	1/1:7,0:30:67.85:572,68,0	0/0:17,0:17:51.16:0,51,644	0/0:26,0:26:59.28:0,59,789	0/0:24,0:24:54.13:0,54,669	0/0:26,0:26:69.18:0,69,870	0/0:26,0:26:66.11:0,66,804	0/0:20,0:20:45.08:0,45,568	0/0:17,0:17:48.15:0,48,607	0/0:26,0:26:62.97:0,63,757	0/0:17,0:17:48.15:0,48,606	0/0:16,0:16:36.06:0,36,455	1/1:6,0:19:37.14:304,37,0	1/1:4,2:24:56.37:523,56,0	1/1:1,0:11:20.92:161,21,0	0/0:21,0:21:28.28:0,28,547	0/0:18,0:18:45.12:0,45,568	0/0:11,0:11:27.03:0,27,323	0/0:26,0:26:66.13:0,66,812	1/1:6,1:29:69.96:587,70,0	1/1:2,0:22:47.80:365,48,0	1/1:2,0:11:17.93:138,18,0
chr10	69651706	.	TCTG	T	2028.04	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=10.848;DP=819;FS=0.000;HRun=0;HaplotypeScore=121.7756;InbreedingCoeff=1.0000;MQ=88.74;MQ0=0;MQRankSum=-5.537;QD=34.97;ReadPosRankSum=0.240;VQSLOD=4.0357;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,32:34:81.71:1350,82,0	0/0:19,0:19:51.18:0,51,1176	0/0:23,0:23:63.22:0,63,1400	0/0:37,0:37:99:0,105,2228	1/1:1,23:24:51.17:799,51,0	0/0:24,0:24:66.23:0,66,1496	0/0:24,0:24:72.25:0,72,1639	0/0:34,0:34:99:0,99,2185	0/0:33,0:33:96.33:0,96,2212	0/0:32,0:32:93.31:0,93,2057	0/0:22,0:22:63.22:0,63,1410	0/0:31,0:31:93.32:0,93,2143	0/0:27,0:27:78.27:0,78,1783	0/0:41,0:41:99:0,123,2815	0/0:29,0:29:84.29:0,84,1915	0/0:38,0:38:99:0,114,2459	0/0:28,0:28:81.28:0,81,1846	0/0:26,0:26:78.25:0,78,1729	0/0:20,0:20:60.21:0,60,1363	0/0:28,0:28:75.26:0,75,1729	0/0:34,0:34:99:0,102,2287	0/0:38,0:38:99:0,108,2443	0/0:18,0:18:54.17:0,54,1175	0/0:39,0:39:99:0,111,2471	0/0:35,0:35:99:0,102,2315	0/0:31,0:31:90.31:0,90,2055	0/0:36,0:36:99:0,108,2447	0/0:14,0:14:42.14:0,42,966
chr10	69653583	.	CACCAGCAG	C	9572.53	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=15.908;DP=665;FS=5.259;HRun=0;HaplotypeScore=181.3890;InbreedingCoeff=0.9960;MQ=77.86;MQ0=0;MQRankSum=-15.396;QD=67.41;ReadPosRankSum=0.170;VQSLOD=4.4118;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:42,0:42:99:0,123,5308	0/0:12,0:12:36.12:0,36,1597	0/0:20,0:20:51.17:0,51,1982	0/0:13,0:13:15.72:0,16,1273	0/0:28,0:28:81.28:0,81,3523	0/0:19,0:19:48.16:0,48,2142	0/0:18,0:18:54.19:0,54,2208	1/1:2,28:30:84.29:2359,84,0	0/0:21,0:21:63.22:0,63,2720	0/0:26,0:26:78.27:0,78,3404	0/0:14,0:14:42.14:0,42,1856	0/0:41,0:41:99:0,114,5005	0/0:30,0:30:87.29:0,87,3703	0/0:30,0:30:87.30:0,87,3849	0/0:30,0:30:87.30:0,87,3767	0/0:25,0:25:75.26:0,75,3348	0/0:30,0:30:90.31:0,90,3987	0/0:16,0:16:48.16:0,48,2077	1/1:3,16:18:45.15:1291,45,0	1/1:0,21:21:45.15:1290,45,0	1/1:3,16:19:21.07:587,21,0	0/0:25,0:25:75.26:0,75,3259	0/0:14,0:14:36.11:0,36,1493	0/0:40,0:40:99:0,111,4835	0/0:29,0:29:84.29:0,84,3695	1/1:2,19:21:57.20:1635,57,0	1/1:1,23:24:63.22:1807,63,0	1/1:0,8:8:21.07:603,21,0
chr10	69653734	.	TCATCCATCCATCCACC	T	644.59	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.296;DP=856;FS=3.178;HRun=0;HaplotypeScore=348.2533;InbreedingCoeff=0.8737;MQ=72.50;MQ0=5;MQRankSum=1.022;QD=10.40;ReadPosRankSum=-1.336;VQSLOD=0.9876;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,24:32:1.83:216,2,0	0/0:14,0:14:26.85:0,27,894	0/0:42,0:36:73.01:0,73,757	0/0:26,0:23:43.11:0,43,447	1/1:5,23:28:38.44:536,38,0	0/0:21,0:21:57.10:0,57,2733	0/0:37,0:37:90.10:0,90,3046	0/0:46,0:45:97.99:0,98,806	0/0:36,0:36:93.11:0,93,3084	0/0:36,0:36:90.06:0,90,3836	0/0:25,0:25:63.03:0,63,2141	0/0:33,0:33:93.03:0,93,3299	0/0:46,0:46:99:0,114,4731	0/0:33,0:33:86.93:0,87,2528	0/0:45,0:45:99:0,120,4455	0/0:37,0:36:99:0,103,3933	0/0:40,0:40:99:0,102,4547	0/0:31,0:31:73.78:0,74,3811	0/0:18,0:18:42:0,42,890	0/0:23,0:23:53.98:0,54,1345	0/0:52,0:52:99:0,102,2433	0/0:21,0:21:51.09:0,51,2304	0/0:18,0:18:45.15:0,45,2742	0/0:36,0:36:97.47:0,97,4685	0/0:25,0:25:57.14:0,57,3055	0/0:24,0:23:66.05:0,66,1547	0/0:24,0:24:62.14:0,62,1245	0/0:5,0:5:15:0,15,309
chr10	69653749	.	CCCAT	C	1620.86	PASS	AB=0.857;AC=14;AF=0.269;AN=52;BaseQRankSum=9.783;DP=844;FS=9.218;HRun=0;HaplotypeScore=136.4615;InbreedingCoeff=0.7253;MQ=64.43;MQ0=10;MQRankSum=0.822;QD=7.95;ReadPosRankSum=-0.929;VQSLOD=2.2987;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:25:3:27,3,0	0/0:10,0:10:12.03:0,12,213	./.	./.	0/1:25,0:24:7.93:45,0,8	0/0:22,0:22:36.12:0,36,797	0/0:40,0:39:54.13:0,54,961	0/0:42,0:39:0:0,0,0	0/0:36,0:36:45.14:0,45,938	0/0:39,0:37:57.16:0,57,1292	0/0:26,0:26:33.10:0,33,638	0/0:35,0:35:42.13:0,42,835	0/0:44,0:44:66.21:0,66,1389	0/0:34,0:34:27.09:0,27,554	0/0:44,0:44:63.19:0,63,1266	0/0:43,0:42:66.68:0,67,1351	0/0:38,0:38:17.10:0,17,1206	0/0:32,0:32:57.06:0,57,1138	1/1:12,5:18:18.01:225,18,0	0/1:15,10:25:9.15:246,0,9	1/1:24,25:49:42.14:643,42,0	0/0:23,0:22:33.84:0,34,676	0/0:17,0:17:36.12:0,36,785	0/0:36,0:36:60.16:0,60,1221	0/0:26,0:26:30.52:0,31,994	1/1:20,9:28:24.05:330,24,0	1/1:13,10:23:15.05:230,15,0	1/1:4,5:9:3.01:46,3,0
chr10	69654326	.	CCA	C	922.32	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.055;DP=695;FS=3.690;HRun=0;HaplotypeScore=96.3771;InbreedingCoeff=0.9988;MQ=98.93;MQ0=0;MQRankSum=-6.843;QD=18.08;ReadPosRankSum=-0.815;VQSLOD=3.4591;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:6,24:30:46.46:620,46,0	0/0:10,0:10:30.10:0,30,566	0/0:36,0:36:99:0,102,1943	0/0:37,0:37:93.58:0,94,1649	1/1:4,17:21:29.57:424,30,0	0/0:23,0:23:66.23:0,66,1262	0/0:30,0:30:90.29:0,90,1695	0/0:33,0:33:96.33:0,96,1833	0/0:15,0:15:45.15:0,45,869	0/0:31,0:31:93.31:0,93,1762	0/0:20,0:20:57.20:0,57,1089	0/0:26,0:26:78.27:0,78,1480	0/0:27,0:27:81.26:0,81,1516	0/0:35,0:35:99:0,105,1947	0/0:24,0:24:69.24:0,69,1323	0/0:29,0:29:87.30:0,87,1681	0/0:32,0:32:93.32:0,93,1778	0/0:9,0:9:27.09:0,27,522	0/0:22,0:22:66.21:0,66,1209	0/0:34,0:34:99:0,102,1924	0/0:35,0:35:99:0,105,2000	0/0:15,0:15:42.14:0,42,812	0/0:22,0:22:66.23:0,66,1262	0/0:21,0:21:63.22:0,63,1217	0/0:20,0:20:60.21:0,60,1159	0/0:20,0:20:57.20:0,57,1083	0/0:26,0:26:75.26:0,75,1448	0/0:12,0:12:36.12:0,36,695
chr10	69656458	.	TTC	T	499.46	PASS	AB=0.978;AC=28;AF=0.519;AN=54;BaseQRankSum=2.380;DP=493;FS=4.310;HRun=0;HaplotypeScore=80.2484;InbreedingCoeff=-0.1877;MQ=72.53;MQ0=9;MQRankSum=-0.229;QD=1.41;ReadPosRankSum=0.572;VQSLOD=0.6965;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:13,1:12:0.39:0,0,1	1/1:3,0:4:3.01:31,3,0	./.	0/0:27,0:16:0.47:0,0,1	1/1:23,0:24:1.53:5,2,0	0/1:20,3:23:4.92:120,0,5	0/0:13,0:13:0:0,0,0	0/0:39,0:39:20.65:0,21,135	0/1:10,0:10:15.96:43,0,16	1/1:20,0:20:2.99:24,3,0	0/0:13,0:12:3:0,3,25	0/1:16,2:17:23.60:24,0,58	0/1:15,0:15:3.97:4,0,72	0/1:9,1:9:23.58:24,0,71	1/1:14,0:19:2.99:24,3,0	1/1:14,2:14:6.43:44,6,0	0/1:23,0:23:5.71:41,0,6	0/1:14,0:14:34.58:35,0,62	0/1:23,0:23:9.46:9,0,58	0/1:21,0:21:7.17:7,0,52	0/0:9,0:9:2.68:0,3,11	1/1:9,1:10:5.98:54,6,0	0/1:16,0:16:22.34:56,0,22	1/1:15,0:15:3.01:33,3,0	0/1:10,0:10:21.91:22,0,34	0/1:21,0:21:5.38:5,0,44	0/1:20,0:20:3.26:3,0,3	0/1:21,0:20:12.28:28,0,12
chr10	69656497	.	TCTCTCC	T	1513.75	PASS	AB=0.969;AC=27;AF=0.500;AN=54;BaseQRankSum=6.823;DP=437;FS=8.568;HRun=0;HaplotypeScore=106.0442;InbreedingCoeff=-0.0706;MQ=49.14;MQ0=42;MQRankSum=-2.782;QD=4.44;ReadPosRankSum=1.246;VQSLOD=1.5650;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:17,0:14:9.44:100,9,0	0/1:7,0:6:15.98:30,0,16	./.	0/1:20,0:7:1:1,0,15	1/1:23,0:22:23.51:178,24,0	0/1:23,0:23:9.81:10,0,99	0/0:14,0:12:18.35:0,18,148	0/0:19,0:15:7.88:0,8,148	0/1:20,0:19:17.52:18,0,231	0/1:11,0:10:6.03:6,0,91	0/0:8,0:8:8.58:0,9,51	0/0:14,0:12:23.98:0,24,291	0/1:12,0:12:8.94:9,0,213	0/0:15,0:14:18.46:0,18,246	0/1:13,0:13:29.50:29,0,89	0/1:13,0:10:25.49:25,0,165	1/1:22,0:22:53.30:352,53,0	0/1:18,0:15:71.80:72,0,122	0/1:21,0:18:23.91:146,0,24	0/1:16,0:16:37.81:38,0,47	0/1:9,0:6:2.30:41,0,2	0/0:14,0:14:11.75:0,12,105	0/1:2,11:13:21.85:94,0,22	1/1:2,10:11:3.01:49,3,0	0/1:15,0:14:25.61:26,0,105	0/1:21,0:20:5.50:214,0,5	1/1:21,0:20:7.95:100,8,0	1/1:14,0:12:16.19:145,16,0
chr10	69656499	.	TCTCCCTCC	T	1530.45	PASS	AB=0.991;AC=25;AF=0.463;AN=54;BaseQRankSum=5.829;DP=435;FS=26.694;HRun=0;HaplotypeScore=116.2419;InbreedingCoeff=0.2810;MQ=50.63;MQ0=41;MQRankSum=-1.874;QD=5.30;ReadPosRankSum=-1.968;VQSLOD=0.4848;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:17,0:14:26.62:41,0,27	0/0:7,0:6:5.17:0,5,57	./.	0/1:21,0:9:19.60:20,0,38	0/1:23,0:22:5.07:13,0,5	0/0:23,0:23:28.03:0,28,367	0/0:13,0:11:20.28:0,20,321	0/1:19,0:15:36.08:36,0,90	0/1:19,0:18:3.13:3,0,526	0/0:9,0:8:15.52:0,16,236	0/0:6,0:6:6.02:0,6,83	0/0:14,0:12:21.07:0,21,472	0/1:13,0:13:49.37:49,0,388	0/0:15,0:14:18.94:0,19,363	0/0:14,0:14:23.98:0,24,298	0/1:12,0:9:20.05:20,0,313	1/1:23,0:23:10.21:141,10,0	0/0:18,0:15:18.10:0,18,310	1/1:21,0:18:37.74:390,38,0	1/1:8,9:17:9.43:89,9,0	1/1:9,0:6:6.02:96,6,0	0/0:14,0:14:12.04:0,12,226	1/1:12,0:12:5.71:30,6,0	0/1:11,0:11:6.86:7,0,14	0/1:17,0:16:15.82:16,0,246	1/1:21,0:20:29.80:396,30,0	1/1:19,0:18:4.29:118,4,0	1/1:14,0:12:21.48:247,21,0
chr10	69656501	.	TCCCTCC	T	1615.07	PASS	AB=0.968;AC=23;AF=0.411;AN=56;BaseQRankSum=5.245;DP=435;FS=23.081;HRun=0;HaplotypeScore=103.8053;InbreedingCoeff=-0.0802;MQ=50.82;MQ0=40;MQRankSum=-3.479;QD=5.14;ReadPosRankSum=-1.165;VQSLOD=0.3787;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:15,0:14:22.91:23,0,51	0/1:8,0:7:14.21:14,0,38	0/0:14,0:3:1.82:0,2,5	0/1:22,0:10:19.82:20,0,38	0/1:20,0:21:5.28:14,0,5	0/0:22,0:22:24.66:0,25,249	0/0:13,0:11:23.29:0,23,352	0/1:15,0:11:6.43:53,0,6	0/1:20,0:19:32.22:32,0,501	0/0:8,0:8:21.04:0,21,345	0/0:7,0:7:6:0,6,68	0/0:14,0:12:24.08:0,24,455	0/1:13,0:13:43.39:43,0,399	0/0:15,0:14:18.94:0,19,295	0/0:15,0:15:2.38:0,2,366	0/1:13,0:11:10.67:11,0,377	0/1:24,0:24:12.58:13,0,41	0/1:16,0:15:12.56:13,0,147	1/1:7,0:18:31.67:326,32,0	0/1:12,2:14:6.72:98,0,7	0/1:9,0:6:3.91:87,0,4	0/0:6,0:13:12.04:0,12,176	0/1:13,0:13:8.31:73,0,8	0/1:12,0:11:13.95:25,0,14	0/1:17,0:16:15.26:15,0,232	1/1:4,17:20:38.26:499,38,0	1/1:3,16:18:8.52:157,9,0	1/1:15,0:13:7.82:271,8,0
chr10	69656510	.	C	CA	381.55	PASS	AB=1.000;AC=5;AF=0.089;AN=56;BaseQRankSum=2.232;DP=442;FS=1.991;HRun=0;HaplotypeScore=91.0124;InbreedingCoeff=0.6508;MQ=57.87;MQ0=33;MQRankSum=0.600;QD=7.07;ReadPosRankSum=1.653;VQSLOD=3.3184;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:7,12:17:22.83:263,23,0	0/0:8,0:8:12.34:0,12,126	0/0:20,0:9:7.12:0,7,174	0/0:25,0:12:20.08:0,20,158	1/1:6,15:20:23.67:237,24,0	0/0:22,0:22:34.58:0,35,293	0/0:15,0:14:38.87:0,39,474	0/0:10,0:6:0.89:0,1,2	0/0:17,0:16:35.96:0,36,438	0/0:10,0:10:27.02:0,27,341	0/0:5,0:5:5.91:0,6,58	0/0:13,0:11:27.07:0,27,345	0/0:15,0:15:35.70:0,36,387	0/0:15,0:14:21.03:0,21,255	0/0:14,0:14:35.85:0,36,391	0/0:17,0:14:32.91:0,33,392	0/0:17,0:17:48.08:0,48,581	0/0:17,0:15:38.71:0,39,426	0/0:18,0:16:20.15:0,20,170	0/1:14,0:14:2.29:2,0,19	0/0:10,0:8:8.74:0,9,57	0/0:14,0:14:12.04:0,12,167	0/0:14,0:14:3.10:0,3,62	0/0:15,0:14:17.92:0,18,201	0/0:17,0:16:26.04:0,26,275	0/0:22,0:21:35.59:0,36,289	0/0:19,0:18:14.60:0,15,92	0/0:19,0:18:14.33:0,14,92
chr10	69656517	.	CCT	C	843.16	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=2.361;DP=452;FS=8.515;HRun=0;HaplotypeScore=93.1345;InbreedingCoeff=0.7997;MQ=63.74;MQ0=22;MQRankSum=-1.047;QD=8.11;ReadPosRankSum=-1.435;VQSLOD=2.4594;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:15:26.92:0,27,224	0/0:7,0:7:8.99:0,9,119	0/0:23,0:12:20.24:0,20,318	0/0:28,0:16:8.31:0,8,191	0/0:20,0:21:32.59:0,33,251	0/0:20,0:20:21.01:0,21,244	0/0:15,0:15:36.10:0,36,543	0/1:12,0:8:14.89:69,0,15	0/0:16,0:16:27.09:0,27,444	0/0:12,0:12:26.98:0,27,389	0/0:5,0:5:8.97:0,9,94	0/0:14,0:14:30.06:0,30,420	0/0:15,0:15:28.35:0,28,439	0/0:15,0:14:18.03:0,18,237	0/0:13,0:13:24.08:0,24,390	0/0:16,0:14:32.15:0,32,453	0/0:21,0:21:51.03:0,51,681	0/0:20,0:19:39.90:0,40,485	1/1:15,0:15:17.99:184,18,0	1/1:11,1:12:8.88:81,9,0	1/1:11,0:9:14.94:130,15,0	0/0:14,0:14:11.87:0,12,184	0/0:16,0:16:11.83:0,12,123	0/0:21,0:20:27.01:0,27,318	0/0:19,0:18:33.03:0,33,417	1/1:20,1:21:35.80:349,36,0	1/1:16,1:17:17.83:172,18,0	1/1:4,12:15:3.01:36,3,0
chr10	69656518	.	CT	C	389.90	PASS	AB=0.934;AC=10;AF=0.179;AN=56;BaseQRankSum=2.516;DP=452;FS=5.584;HRun=1;HaplotypeScore=90.0430;InbreedingCoeff=0.5068;MQ=65.31;MQ0=18;MQRankSum=-0.284;QD=3.90;ReadPosRankSum=-1.937;VQSLOD=-0.3998;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:15:26.69:0,27,220	0/0:7,0:7:9.50:0,9,118	0/0:24,0:13:20.34:0,20,324	0/0:29,0:16:29.53:0,30,234	0/0:25,0:25:38.70:0,39,301	0/0:20,0:20:14.86:0,15,214	0/0:17,0:17:43.90:0,44,521	0/1:9,1:7:14.83:69,0,15	0/0:15,0:15:29.50:0,30,388	0/0:12,0:12:27.96:0,28,349	0/0:4,0:4:8.97:0,9,87	0/0:14,0:14:30.04:0,30,366	0/0:16,0:16:38.16:0,38,426	0/0:15,0:14:21.01:0,21,223	0/0:13,0:13:24.01:0,24,323	0/0:15,0:14:35.12:0,35,404	0/0:22,0:22:54.01:0,54,643	0/0:20,0:19:46.38:0,46,472	0/1:13,1:14:22.22:81,0,22	1/1:13,0:13:14.21:90,14,0	1/1:8,2:9:14.20:91,14,0	0/0:13,0:14:11.83:0,12,167	0/0:16,0:16:11.88:0,12,106	0/0:21,0:20:27:0,27,288	0/0:17,0:16:32.36:0,32,378	0/1:20,1:21:24.49:104,0,24	1/1:17,0:17:14.92:105,15,0	0/1:14,1:15:5.41:5,0,7
chr10	69657016	.	C	CA	5196.32	PASS	AB=0.900;AC=15;AF=0.268;AN=56;BaseQRankSum=-13.853;DP=628;FS=1.511;HRun=8;HaplotypeScore=62.7479;InbreedingCoeff=0.9104;MQ=83.03;MQ0=0;MQRankSum=-2.438;QD=26.65;ReadPosRankSum=-0.904;VQSLOD=5.2425;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:93.02:0,93,845	0/0:14,0:14:39.02:0,39,357	0/0:18,0:18:38.21:0,38,329	0/1:14,0:18:16.59:17,0,160	0/0:32,0:32:90.04:0,90,822	0/0:27,0:27:74.99:0,75,679	0/0:19,0:19:48.02:0,48,439	1/1:6,39:45:99:1338,117,0	0/0:26,0:26:72.01:0,72,654	0/0:25,0:25:72.03:0,72,659	0/0:16,0:16:45.02:0,45,412	0/0:20,0:20:54.02:0,54,494	0/0:23,0:23:66.04:0,66,604	0/0:21,0:21:57.03:0,57,522	0/0:26,0:26:72.03:0,72,659	0/0:24,0:24:69.02:0,69,627	0/0:17,0:17:36:0,36,329	0/0:16,0:16:48.03:0,48,439	1/1:4,11:15:41.95:456,42,0	1/1:3,30:33:84.21:955,84,0	1/1:1,23:24:51.15:589,51,0	0/0:16,0:16:48.02:0,48,438	0/0:18,0:18:39.01:0,39,356	0/0:18,0:18:50.92:0,51,450	0/0:21,0:21:60.02:0,60,545	1/1:2,20:22:60.18:692,60,0	1/1:3,26:29:53.77:873,54,0	1/1:1,8:9:24.07:277,24,0
chr10	69660458	.	ACCCAGGTTCAGTT	A	11995.52	PASS	AB=0.531;AC=17;AF=0.304;AN=56;BaseQRankSum=15.883;DP=604;FS=2.304;HRun=0;HaplotypeScore=231.1950;InbreedingCoeff=0.9076;MQ=63.53;MQ0=6;MQRankSum=-12.468;QD=65.55;ReadPosRankSum=0.599;VQSLOD=4.6570;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,12:21:30.10:1109,30,0	0/0:11,0:11:33.10:0,33,1742	0/0:29,0:25:56.98:0,57,3059	0/0:21,0:18:44.18:0,44,2197	1/1:7,20:27:36.12:1416,36,0	0/0:28,0:28:78.27:0,78,4864	0/0:31,0:31:87.30:0,87,5527	1/1:8,18:26:57.18:1966,57,0	0/0:27,0:27:72.25:0,72,4315	0/0:15,0:15:33.11:0,33,2094	0/0:17,0:17:45.15:0,45,2518	0/0:20,0:20:54.19:0,54,3377	0/0:16,0:16:48.16:0,48,2741	0/0:25,0:25:75.26:0,75,4549	0/0:30,0:30:84.29:0,84,5415	0/0:22,0:22:63.22:0,63,3557	0/0:30,0:30:84.29:0,84,4930	0/0:18,0:18:54.19:0,54,3442	1/1:6,10:16:36.11:1124,36,0	1/1:8,13:20:30.10:1098,30,0	1/1:6,17:23:36.11:1322,36,0	0/0:16,0:16:48.16:0,48,3018	0/0:9,0:9:15.05:0,15,975	0/0:34,0:34:96.32:0,96,5899	0/0:22,0:22:63.22:0,63,3877	0/1:2,15:17:99:1578,0,148	1/1:5,19:24:50.87:1910,51,0	1/1:3,3:6:12.04:472,12,0
chr10	69660568	.	G	GCA	1015.69	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.894;DP=679;FS=27.343;HRun=0;HaplotypeScore=114.5055;InbreedingCoeff=0.9954;MQ=67.15;MQ0=3;MQRankSum=-3.211;QD=19.92;ReadPosRankSum=-1.881;VQSLOD=1.7759;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:16,10:26:30.08:442,30,0	0/0:9,0:10:20.86:0,21,218	0/0:22,0:19:44.75:0,45,485	0/0:31,0:25:37.32:0,37,417	1/1:8,16:25:42.73:695,43,0	0/0:22,0:22:48.97:0,49,649	0/0:35,0:36:72.02:0,72,830	0/0:28,0:29:56.96:0,57,630	0/0:21,0:21:60.19:0,60,733	0/0:28,0:29:78.08:0,78,931	0/0:17,0:17:23.92:0,24,269	0/0:33,0:33:84.20:0,84,996	0/0:15,0:16:26.90:0,27,293	0/0:24,0:24:52.10:0,52,677	0/0:25,0:26:69.03:0,69,808	0/0:23,0:23:63.19:0,63,758	0/0:32,0:34:59.65:0,60,859	0/0:20,0:20:51.16:0,51,621	0/0:12,0:12:33.10:0,33,403	0/0:22,0:23:57.13:0,57,696	0/0:34,0:34:51.16:0,51,622	0/0:17,0:17:45.13:0,45,538	0/0:15,0:16:33.10:0,33,403	0/0:42,0:42:99:0,105,1256	0/0:29,0:29:81.23:0,81,975	0/0:29,0:29:81.24:0,81,974	0/0:20,0:20:51.16:0,51,623	0/0:11,0:11:33.10:0,33,403
chr10	69660628	.	A	AT	6110.48	PASS	AB=1.000;AC=17;AF=0.304;AN=56;BaseQRankSum=11.356;DP=643;FS=2.655;HRun=6;HaplotypeScore=87.9325;InbreedingCoeff=0.9030;MQ=67.49;MQ0=0;MQRankSum=0.263;QD=24.84;ReadPosRankSum=-1.027;VQSLOD=4.2428;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:34,0:34:85.96:412,86,0	0/0:8,0:8:21.05:0,21,214	0/0:10,0:8:14.97:0,15,142	0/0:10,0:10:8.49:0,8,59	0/1:30,0:30:20.88:187,0,21	0/0:24,0:23:72.13:0,72,717	0/0:18,0:18:48.04:0,48,461	1/1:4,38:42:99:1305,114,0	0/0:15,0:15:42.09:0,42,428	0/0:37,0:37:99:0,99,969	0/0:20,0:20:57.09:0,57,570	0/0:26,0:26:72.12:0,72,715	0/0:13,0:13:39.04:0,39,372	0/0:21,0:21:54.06:0,54,527	0/0:25,0:25:69.14:0,69,693	0/0:20,0:20:60.06:0,60,576	0/0:26,0:26:75.16:0,75,758	0/0:21,0:21:57.08:0,57,566	1/1:4,17:22:57.06:642,57,0	1/1:3,25:28:72.15:869,72,0	1/1:3,15:18:39.12:490,39,0	0/0:19,0:19:42.06:0,42,417	0/0:19,0:19:48.11:0,48,489	0/0:24,0:24:69.12:0,69,685	0/0:41,0:41:99:0,114,1162	1/1:2,30:33:79.48:1035,79,0	1/1:1,19:20:48.05:603,48,0	1/1:4,15:19:45.14:566,45,0
chr10	69660634	.	T	TA	3191.81	PASS	AB=1.000;AC=19;AF=0.339;AN=56;BaseQRankSum=15.530;DP=631;FS=1.434;HRun=7;HaplotypeScore=93.8269;InbreedingCoeff=0.9446;MQ=68.70;MQ0=0;MQRankSum=-1.298;QD=12.87;ReadPosRankSum=-0.162;VQSLOD=3.0421;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,36:38:96.25:1139,96,0	0/0:7,0:7:21.03:0,21,202	0/0:9,0:8:14.38:0,14,152	0/1:9,0:9:0.81:1,0,24	1/1:4,28:32:75.05:851,75,0	0/0:25,0:24:66.08:0,66,626	0/0:20,0:20:50.97:0,51,463	1/1:38,0:38:20.64:261,21,0	0/0:14,0:14:42.02:0,42,396	0/0:34,0:34:84.06:0,84,800	0/0:20,0:20:57.08:0,57,546	0/0:26,0:26:66.07:0,66,626	0/0:14,0:14:33.03:0,33,312	0/0:20,0:20:51.01:0,51,476	0/0:24,0:24:66.09:0,66,631	0/0:20,0:20:45.07:0,45,434	0/0:25,0:25:72.12:0,72,694	0/0:22,0:22:57.05:0,57,542	1/1:20,0:20:12.85:122,13,0	1/1:26,0:26:38.72:248,39,0	1/1:17,0:17:16.18:140,16,0	0/0:18,0:18:45.03:0,45,421	0/0:20,0:20:60.05:0,60,559	0/0:23,0:23:60.09:0,60,578	0/0:41,0:41:99:0,114,1100	1/1:32,0:32:24.33:267,24,0	1/1:20,0:20:23.89:206,24,0	1/1:16,0:16:20.54:168,21,0
chr10	69662638	.	T	TATTTATTTGTTAA	21445.80	PASS	AB=0.676;AC=13;AF=0.232;AN=56;BaseQRankSum=-2.307;DP=824;FS=3.470;HRun=0;HaplotypeScore=282.1316;InbreedingCoeff=0.8981;MQ=87.94;MQ0=0;MQRankSum=-16.730;QD=142.97;ReadPosRankSum=-2.774;VQSLOD=3.9352;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:99:0,102,3988	0/0:18,0:18:51.16:0,51,1938	0/0:35,0:35:99:0,102,3480	0/0:29,0:29:75.25:0,75,2527	0/0:34,0:34:99:0,99,3884	0/0:26,0:26:78.25:0,78,3136	0/0:31,0:31:93.32:0,93,3670	1/1:22,6:31:90.28:3868,90,0	0/0:35,0:35:99:0,105,4165	0/0:37,0:37:99:0,111,4239	0/0:23,0:23:69.24:0,69,2738	0/0:34,0:34:99:0,102,3998	0/0:40,0:40:99:0,120,4837	0/0:35,0:35:99:0,102,3896	0/0:47,0:47:99:0,141,5628	0/0:36,0:36:99:0,105,4020	0/0:51,0:51:99:0,154,6111	0/0:18,0:18:54.19:0,54,2210	1/1:8,3:13:36.02:1403,36,0	1/1:11,16:29:84.25:4681,84,0	1/1:7,5:17:30.10:1916,30,0	0/0:25,0:25:75.24:0,75,2957	0/0:32,0:32:93.32:0,93,3815	0/0:32,0:32:96.32:0,96,3812	0/0:21,0:21:63.22:0,63,2425	0/1:13,10:25:50.63:3891,0,51	1/1:5,16:28:75.73:4708,76,0	1/1:2,4:6:18.06:978,18,0
chr10	69663846	.	A	ATATT	188.62	PASS	AB=0.905;AC=3;AF=0.075;AN=40;BaseQRankSum=1.111;DP=294;FS=1.497;HRun=0;HaplotypeScore=53.6127;InbreedingCoeff=-0.1771;MQ=77.30;MQ0=1;MQRankSum=-0.434;QD=4.72;ReadPosRankSum=0.942;VQSLOD=1.6209;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:9,0:9:41.44:93,0,41	0/0:2,0:5:5.84:0,6,44	./.	./.	0/0:9,0:9:3.54:0,4,49	0/0:11,0:11:12.03:0,12,164	./.	0/0:32,0:32:2.98:0,3,22	0/0:4,0:4:2.99:0,3,24	0/0:19,0:19:15.03:0,15,192	./.	0/0:11,0:11:3.01:0,3,46	0/0:7,0:7:12.04:0,12,183	0/0:9,0:9:9.02:0,9,116	0/0:12,0:12:3:0,3,25	0/0:6,0:6:9.03:0,9,138	0/0:23,0:23:27.04:0,27,268	0/1:12,8:20:63.31:176,0,63	0/1:11,0:11:7.98:8,0,70	0/0:10,0:10:3.47:0,3,27	./.	./.	./.	./.	0/0:20,0:20:27.09:0,27,416	0/0:8,0:8:6.01:0,6,72	0/0:10,0:10:6:0,6,54	0/0:15,0:15:3:0,3,26
chr10	69663878	.	TTATTTATTTATGTATG	T	1235.70	PASS	AB=1.000;AC=14;AF=0.292;AN=48;BaseQRankSum=2.569;DP=178;FS=0.936;HRun=0;HaplotypeScore=77.0455;InbreedingCoeff=0.5195;MQ=58.61;MQ0=4;MQRankSum=-4.234;QD=26.86;ReadPosRankSum=-2.620;VQSLOD=1.6578;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:17.68:0,18,1081	0/0:4,0:4:6.02:0,6,167	0/0:5,0:2:5.85:0,6,55	./.	0/0:4,0:4:7.92:0,8,537	0/0:8,0:8:24.08:0,24,965	./.	0/1:7,0:7:48.83:199,0,49	0/0:2,0:2:6.02:0,6,97	0/0:7,0:7:21.06:0,21,1016	0/0:1,0:1:3.01:0,3,50	0/0:5,0:5:12.04:0,12,408	0/0:6,0:6:18.06:0,18,924	0/0:4,0:4:9.02:0,9,327	0/0:7,0:7:9.03:0,9,331	0/0:3,0:3:9.03:0,9,653	0/0:24,0:24:27.09:0,27,1053	0/0:21,0:21:24.67:0,25,996	1/1:2,5:6:15.01:482,15,0	1/1:0,2:2:6.02:264,6,0	1/1:2,0:2:5.75:66,6,0	./.	1/1:3,0:3:3.38:8,3,0	./.	0/0:13,0:13:36.12:0,36,2153	0/1:5,0:5:56.46:56,0,128	1/1:1,8:9:6.02:272,6,0	1/1:11,0:11:3.01:40,3,0
chr10	69663882	.	TTATTTATGTATG	T	1393.55	PASS	AB=0.889;AC=16;AF=0.320;AN=50;BaseQRankSum=4.283;DP=189;FS=0.809;HRun=0;HaplotypeScore=67.1364;InbreedingCoeff=0.3890;MQ=61.49;MQ0=4;MQRankSum=-2.344;QD=15.48;ReadPosRankSum=-3.156;VQSLOD=0.2253;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:15,0:15:10.97:11,0,768	0/0:4,0:4:0.86:0,1,82	0/0:5,0:3:8.90:0,9,108	./.	0/0:4,0:4:7.92:0,8,440	0/0:9,0:9:27.08:0,27,811	./.	0/1:12,0:12:8.95:440,0,9	0/0:2,0:2:6:0,6,73	0/0:7,0:7:21.06:0,21,816	0/0:1,0:1:3.01:0,3,50	0/0:5,0:5:12.04:0,12,330	0/0:6,0:6:18.06:0,18,776	0/0:4,0:4:9.02:0,9,289	0/0:7,0:7:12.04:0,12,331	0/0:4,0:4:12.04:0,12,572	0/0:24,0:24:27.07:0,27,631	0/1:22,0:22:12.20:12,0,583	1/1:7,0:6:15.01:343,15,0	1/1:2,0:2:6.02:171,6,0	1/1:2,0:2:5.81:67,6,0	./.	1/1:5,0:5:5.15:12,5,0	0/0:1,0:1:1.82:0,2,5	0/0:12,0:12:36.12:0,36,1760	0/1:1,4:5:99:204,0,110	1/1:9,0:9:6.02:179,6,0	1/1:2,9:11:3.01:110,3,0
chr10	69663886	.	TTATG	T	1513.31	PASS	AB=1.000;AC=24;AF=0.444;AN=54;BaseQRankSum=7.157;DP=201;FS=5.228;HRun=0;HaplotypeScore=38.6049;InbreedingCoeff=0.4717;MQ=62.05;MQ0=4;MQRankSum=-2.198;QD=12.61;ReadPosRankSum=0.824;VQSLOD=1.7086;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:14,0:14:93.38:184,0,93	1/1:3,0:3:5.95:43,6,0	0/0:8,0:5:9.86:0,10,81	0/0:4,0:1:3.01:0,3,35	0/1:5,0:5:38.93:39,0,116	0/0:10,0:10:26.98:0,27,378	./.	1/1:13,0:13:12.70:226,13,0	0/0:3,0:3:5.99:0,6,49	0/0:9,0:9:24.05:0,24,373	0/0:1,0:1:3:0,3,25	0/0:5,0:5:14.99:0,15,177	0/0:6,0:6:18:0,18,253	0/0:5,0:5:11.98:0,12,99	0/0:8,0:8:15:0,15,178	0/0:5,0:5:15.02:0,15,255	1/1:2,21:23:24.08:430,24,0	0/1:20,0:20:89.55:231,0,90	1/1:7,0:6:12.01:111,12,0	1/1:2,0:2:5.99:51,6,0	1/1:2,0:2:3:27,3,0	0/0:1,0:1:3:0,3,25	1/1:6,0:6:18.01:164,18,0	1/1:2,0:2:5.80:40,6,0	0/0:16,0:16:48.05:0,48,770	0/1:5,0:5:13.99:69,0,14	1/1:9,0:9:6.01:56,6,0	1/1:9,0:9:3:28,3,0
chr10	69665685	.	A	AC	3788.92	PASS	AB=0.635;AC=20;AF=0.357;AN=56;BaseQRankSum=-8.365;DP=545;FS=2.293;HRun=9;HaplotypeScore=67.4720;InbreedingCoeff=0.8182;MQ=83.59;MQ0=0;MQRankSum=-0.266;QD=17.54;ReadPosRankSum=0.354;VQSLOD=3.9188;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:3,0:26:44.81:0,45,132	0/0:5,0:5:14.96:0,15,124	0/0:19,0:20:11.65:0,12,200	0/0:16,1:17:15.41:0,15,147	0/0:4,0:25:42.77:0,43,126	0/0:25,0:25:50.92:0,51,436	0/0:22,0:22:56.96:0,57,489	0/1:12,10:22:2:208,0,2	0/0:19,0:19:47.65:0,48,412	0/0:19,0:19:38.97:0,39,336	0/0:16,1:18:16.85:0,17,363	0/0:23,0:23:62.99:0,63,547	0/0:17,0:17:44.99:0,45,390	0/0:12,0:13:35.03:0,35,292	0/0:27,0:27:71.97:0,72,625	0/0:12,0:12:32.99:0,33,286	0/1:9,23:32:52.11:619,0,52	1/1:5,14:19:13.49:312,13,0	1/1:5,10:16:29.91:310,30,0	1/1:5,20:25:42.07:451,42,0	1/1:8,15:23:1.94:240,2,0	0/0:17,1:18:9.31:0,9,306	1/1:5,10:15:23.40:249,23,0	1/1:5,7:12:23.97:239,24,0	0/0:23,0:23:59.97:0,60,520	1/1:9,12:21:16.04:396,16,0	1/1:3,19:23:27.21:565,27,0	1/1:2,6:8:18.05:199,18,0
chr10	69665793	.	G	GAA	6105.11	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=7.380;DP=627;FS=1.169;HRun=7;HaplotypeScore=89.5755;InbreedingCoeff=0.9879;MQ=63.51;MQ0=1;MQRankSum=-10.567;QD=38.64;ReadPosRankSum=-3.862;VQSLOD=3.5882;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,99,1118	0/0:16,0:16:45.13:0,45,524	0/0:14,0:12:24:0,24,239	0/0:16,0:9:8.87:0,9,85	0/0:41,0:41:99:0,99,1131	0/0:30,0:31:90:0,90,1026	0/0:23,0:23:60.17:0,60,699	1/1:13,20:33:84.24:1318,84,0	0/0:13,0:13:36.11:0,36,419	0/0:24,0:24:60.17:0,60,698	0/0:18,0:18:48.13:0,48,559	0/0:24,0:24:69.19:0,69,793	0/0:18,0:18:42.12:0,42,489	0/0:9,0:9:24.07:0,24,279	0/0:22,0:22:60.17:0,60,699	0/0:23,0:22:63.15:0,63,713	0/0:33,0:33:90.22:0,90,1025	0/0:27,0:27:57.12:0,57,651	1/1:8,14:22:54.17:840,54,0	1/1:8,18:27:63.12:937,63,0	1/1:4,10:14:33.03:482,33,0	0/0:18,0:17:48.13:0,48,559	0/0:19,0:19:57.17:0,57,664	0/0:19,0:19:57.17:0,57,664	0/0:23,0:23:57.15:0,57,664	1/1:6,15:22:56.67:867,57,0	1/1:13,18:32:83.75:1266,84,0	1/1:0,8:8:24.08:394,24,0
chr10	69665810	.	C	CT	4965.65	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=13.362;DP=647;FS=5.609;HRun=6;HaplotypeScore=85.7590;InbreedingCoeff=0.9988;MQ=73.69;MQ0=0;MQRankSum=-10.155;QD=30.09;ReadPosRankSum=-3.641;VQSLOD=3.6821;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:41:99:0,111,1100	0/0:15,0:15:45.10:0,45,459	0/0:17,0:17:38.04:0,38,345	0/0:14,0:13:24.66:0,25,220	0/0:43,0:43:99:0,120,1223	0/0:36,0:36:93.20:0,93,949	0/0:24,0:24:57.09:0,57,562	1/1:5,29:34:93.25:1108,93,0	0/0:17,0:17:42.04:0,42,402	0/0:33,0:33:99:0,99,1005	0/0:19,0:19:45.05:0,45,443	0/0:20,0:20:54.12:0,54,551	0/0:18,0:18:51.11:0,51,520	0/0:8,0:8:24.05:0,24,245	0/0:26,0:26:72.15:0,72,728	0/0:23,0:22:60.12:0,60,605	0/0:31,0:31:84.19:0,84,857	0/0:21,0:21:57.10:0,57,572	1/1:7,21:28:60.19:754,60,0	1/1:7,19:26:72.21:875,72,0	1/1:3,12:15:30.10:377,30,0	0/0:17,0:17:48.11:0,48,490	0/0:22,0:22:60.12:0,60,605	0/0:17,0:17:48.11:0,48,490	0/0:20,0:20:51.10:0,51,514	1/1:3,21:24:69.22:858,69,0	1/1:8,20:28:57.09:697,57,0	1/1:3,7:10:24.08:298,24,0
chr10	69666618	.	A	AG	1466.35	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=8.084;DP=632;FS=10.409;HRun=1;HaplotypeScore=94.9961;InbreedingCoeff=0.9495;MQ=73.80;MQ0=2;MQRankSum=-1.911;QD=20.37;ReadPosRankSum=-2.479;VQSLOD=2.2719;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:9,8:17:33.01:302,33,0	0/0:19,0:19:57.14:0,57,694	0/0:19,0:19:31.45:0,31,571	0/0:22,0:22:45.34:0,45,601	1/1:12,15:27:70.41:681,70,0	0/0:23,0:23:69.21:0,69,869	0/0:23,0:23:69.20:0,69,866	1/1:28,0:28:77.65:626,78,0	0/0:18,0:18:51.14:0,51,630	0/0:28,0:28:83.93:0,84,1037	0/0:30,0:30:87.26:0,87,1090	0/0:30,0:30:84.23:0,84,1035	0/0:21,0:21:63.16:0,63,772	0/0:24,0:24:72.18:0,72,867	0/0:19,0:19:57.16:0,57,713	0/0:17,0:17:51.13:0,51,613	0/0:28,0:28:84.18:0,84,1037	0/0:19,0:19:53.98:0,54,642	0/0:18,0:17:48.10:0,48,289	0/0:31,0:31:80.09:0,80,381	0/0:7,0:7:14.42:0,14,90	0/0:35,0:35:99:0,102,1292	0/0:18,0:18:54.15:0,54,672	0/0:22,0:22:63.19:0,63,801	0/0:18,0:18:54.17:0,54,687	0/0:30,0:29:76.16:0,76,430	0/0:29,0:29:66.93:0,67,330	0/0:11,0:11:4.88:0,5,45
chr10	69666619	.	G	GTT	6731.41	PASS	AC=18;AF=0.321;AN=56;BaseQRankSum=8.063;DP=643;FS=1.480;HRun=7;HaplotypeScore=94.5788;InbreedingCoeff=0.9901;MQ=73.35;MQ0=2;MQRankSum=-3.995;QD=32.21;ReadPosRankSum=-1.352;VQSLOD=4.5834;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:9,2:20:36.10:428,36,0	0/0:19,0:19:51.14:0,51,583	0/0:21,0:20:44.77:0,45,483	0/0:22,0:22:40.78:0,41,632	1/1:20,0:31:90.04:939,90,0	0/0:23,0:23:63.17:0,63,724	0/0:23,0:23:66.19:0,66,768	1/1:2,0:29:68.96:791,69,0	0/0:18,0:18:51.13:0,51,577	0/0:29,0:29:78.21:0,78,902	0/0:30,0:30:81.20:0,81,928	0/0:30,0:30:78.20:0,78,887	0/0:22,0:22:57.16:0,57,664	0/0:24,0:24:60.16:0,60,699	0/0:19,0:19:51.15:0,51,594	0/0:17,0:17:42.12:0,42,489	0/0:28,0:28:75.22:0,75,874	0/0:18,0:18:37.13:0,37,574	1/1:6,12:17:36.10:542,36,0	1/1:1,30:32:87.23:1338,87,0	1/1:2,5:7:9.03:148,9,0	0/0:34,0:34:96.28:0,96,1118	0/0:18,0:18:48.14:0,48,559	0/0:21,0:21:60.18:0,60,699	0/0:18,0:18:54.16:0,54,628	1/1:5,26:30:49.37:1251,49,0	1/1:6,24:30:65.97:1019,66,0	1/1:0,10:11:20.52:276,21,0
chr10	69666623	.	T	TTTTTG	2525.60	PASS	AB=1.000;AC=14;AF=0.250;AN=56;BaseQRankSum=15.873;DP=639;FS=5.066;HRun=0;HaplotypeScore=147.8136;InbreedingCoeff=0.4861;MQ=72.98;MQ0=2;MQRankSum=-3.605;QD=11.18;ReadPosRankSum=-0.461;VQSLOD=2.8685;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:11,8:19:38.70:750,39,0	0/0:18,0:18:51.14:0,51,918	0/0:23,0:22:56.83:0,57,747	0/0:23,0:24:57.17:0,57,1062	1/1:15,15:30:89.25:1678,89,0	0/0:24,0:24:66.19:0,66,1187	0/0:24,0:24:66.19:0,66,1124	0/1:30,0:30:49.42:49,0,172	0/0:19,0:19:51.16:0,51,944	0/0:29,0:29:84.26:0,84,1541	0/0:29,0:29:81.24:0,81,1412	0/0:28,0:28:78.23:0,78,1354	0/0:22,0:22:60.19:0,60,1164	0/0:24,0:24:60.19:0,60,1158	0/0:18,0:18:51.17:0,51,987	0/0:15,0:15:45.15:0,45,856	0/0:26,0:26:78.25:0,78,1452	0/1:19,0:19:1.21:1,0,826	0/1:17,0:16:10.31:30,0,10	1/1:33,0:33:22.95:78,23,0	1/1:7,0:7:3.82:17,4,0	0/0:33,0:33:96.30:0,96,1761	0/0:18,0:18:54.16:0,54,1007	0/0:20,0:20:60.18:0,60,1074	0/0:19,0:19:57.16:0,57,973	0/1:32,0:31:50.18:54,0,50	0/1:28,0:28:5.74:20,0,6	0/1:11,0:11:5.39:19,0,5
chr10	69667591	.	CT	C	1210.86	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=6.986;DP=453;FS=1.310;HRun=5;HaplotypeScore=43.5974;InbreedingCoeff=0.9385;MQ=84.70;MQ0=0;MQRankSum=-4.832;QD=25.23;ReadPosRankSum=2.493;VQSLOD=2.5870;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,31:33:78.22:885,78,0	0/0:12,0:12:36.11:0,36,478	0/0:17,0:17:41.72:0,42,526	0/0:18,0:18:48.11:0,48,609	1/1:0,15:15:41.48:448,41,0	0/0:22,0:22:63.20:0,63,846	0/0:5,0:5:9.03:0,9,123	0/0:24,0:24:69.20:0,69,912	0/0:16,0:16:45.15:0,45,615	0/0:10,0:10:30.10:0,30,410	0/0:11,0:11:33.10:0,33,437	0/0:11,0:11:33.11:0,33,451	0/0:13,0:13:39.11:0,39,516	0/0:7,0:7:21.07:0,21,286	0/0:21,0:21:60.18:0,60,791	0/0:13,0:13:39.13:0,39,533	0/0:29,0:29:81.23:0,81,1084	0/0:13,0:13:39.13:0,39,532	0/0:16,0:16:42.12:0,42,545	0/0:20,0:20:60.20:0,60,821	0/0:25,0:25:75.23:0,75,994	0/0:3,0:3:9.03:0,9,123	0/0:9,0:9:21.07:0,21,277	0/0:13,0:13:39.13:0,39,533	0/0:16,0:16:48.10:0,48,581	0/0:18,0:18:54.17:0,54,724	0/0:31,0:31:87.24:0,87,1134	0/0:12,0:12:36.10:0,36,475
chr10	69669149	.	GTT	G	1547.37	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=2.019;DP=560;FS=0.000;HRun=14;HaplotypeScore=78.5659;InbreedingCoeff=0.9632;MQ=73.19;MQ0=0;MQRankSum=-0.593;QD=15.95;ReadPosRankSum=6.807;VQSLOD=2.6567;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:14,0:39:83.79:0,84,748	0/0:9,0:9:21.01:0,21,252	0/0:13,0:12:14.11:0,14,138	0/0:11,0:12:17.20:0,17,144	0/0:3,0:19:47.80:0,48,419	0/0:18,0:23:52.56:0,53,575	0/0:24,0:24:60.13:0,60,734	0/0:13,0:21:24.07:0,24,222	0/0:17,0:21:53.56:0,54,609	0/0:23,0:25:41.03:0,41,425	0/0:16,0:19:50.44:0,50,581	0/0:15,0:17:47.45:0,47,497	0/0:12,0:14:31.92:0,32,282	0/0:18,0:21:39.01:0,39,459	0/0:27,0:29:62.13:0,62,735	0/0:15,0:15:39.03:0,39,460	1/1:4,24:31:32.19:576,32,0	1/1:3,12:16:35.73:317,36,0	0/0:12,0:15:20.94:0,21,175	0/0:14,0:24:62.22:0,62,501	0/0:8,0:12:8.87:0,9,64	0/0:14,0:15:32.47:0,32,342	1/1:2,17:22:41.38:403,41,0	1/1:4,21:28:35.43:411,35,0	0/0:11,0:13:23.04:0,23,237	0/0:12,0:32:83.69:0,84,723	0/0:15,0:23:38.71:0,39,285	0/0:3,0:7:11.91:0,12,96
chr10	69669278	.	TC	T	1905.96	PASS	AB=0.861;AC=25;AF=0.446;AN=56;BaseQRankSum=6.509;DP=499;FS=13.165;HRun=11;HaplotypeScore=71.3021;InbreedingCoeff=0.5653;MQ=79.63;MQ0=0;MQRankSum=-1.100;QD=6.42;ReadPosRankSum=6.152;VQSLOD=0.3649;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:23,5:28:34.84:35,0,273	0/1:8,1:9:3.59:4,0,171	0/0:18,1:19:1.02:0,1,128	0/0:15,0:14:20.38:0,20,139	0/0:10,0:10:15.02:0,15,150	0/0:19,1:20:14.89:0,15,328	0/1:12,3:15:46.88:47,0,152	0/0:15,0:15:14.79:0,15,117	0/0:15,3:18:11.41:0,11,305	0/0:17,0:21:24.90:0,25,194	0/0:4,0:9:2.58:0,3,14	0/0:14,2:16:2.40:0,2,216	0/0:16,1:17:11.36:0,11,281	0/1:20,5:25:7.31:7,0,296	0/0:18,0:18:42.10:0,42,441	0/1:14,2:15:15.75:16,0,243	1/1:3,1:30:47.80:154,48,0	1/1:2,0:20:37.37:112,37,0	1/1:7,9:16:23.82:188,24,0	1/1:2,15:20:42.41:331,42,0	1/1:7,25:32:54.07:444,54,0	0/0:10,0:10:18.02:0,18,178	1/1:5,0:20:20.81:60,21,0	1/1:5,0:22:32.58:94,33,0	0/0:12,0:13:11.16:0,11,138	1/1:4,10:14:23.92:194,24,0	1/1:5,15:21:18.98:301,19,0	1/1:1,7:9:14.96:123,15,0
chr10	69670541	.	AACACACACACACACACACACACACAC	A	132.44	PASS	AB=1.000;AC=5;AF=0.104;AN=48;BaseQRankSum=2.882;DP=526;FS=5.635;HRun=0;HaplotypeScore=276.9627;InbreedingCoeff=0.3938;MQ=66.73;MQ0=22;MQRankSum=0.148;QD=2.14;ReadPosRankSum=-0.256;VQSLOD=2.1471;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:45.15:0,45,2477	./.	./.	./.	0/0:9,0:10:9.03:0,9,609	0/0:15,0:14:9.03:0,9,976	0/0:23,0:21:15.01:0,15,738	0/0:25,0:24:7.84:0,8,82	0/0:7,0:7:9.03:0,9,955	0/0:18,0:16:23.75:0,24,1648	0/0:9,0:8:3.01:0,3,240	0/0:14,0:13:12.04:0,12,914	0/0:18,0:18:28.34:0,28,2007	0/0:13,0:13:9.03:0,9,503	0/0:13,0:14:9.03:0,9,772	0/0:18,0:18:21.07:0,21,2089	0/0:23,0:23:6.91:0,7,427	0/1:17,0:16:5.76:18,0,6	0/0:20,0:19:23.57:0,24,1426	0/0:13,0:12:12.04:0,12,635	0/0:25,0:23:21.07:0,21,1361	0/0:16,0:16:9.03:0,9,776	1/1:10,0:8:1.55:4,2,0	1/1:30,5:34:4.25:203,4,0	0/0:13,0:13:6.02:0,6,380	0/0:24,0:23:24.08:0,24,1065	./.	0/0:7,0:6:9.03:0,9,256
chr10	69670883	.	CCTCCTCCT	C	2335.65	PASS	AB=0.877;AC=15;AF=0.288;AN=52;BaseQRankSum=7.125;DP=436;FS=15.132;HRun=0;HaplotypeScore=94.4132;InbreedingCoeff=0.6332;MQ=47.86;MQ0=43;MQRankSum=-6.358;QD=19.46;ReadPosRankSum=-2.996;VQSLOD=1.0652;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:15:21.07:0,21,490	0/0:6,0:5:15.04:0,15,381	0/0:18,0:9:24.07:0,24,601	0/0:28,0:11:16.34:0,16,812	0/0:15,0:6:15.05:0,15,429	0/0:25,0:24:55.92:0,56,1727	0/0:24,0:22:56.93:0,57,1790	1/1:4,21:24:48.63:861,49,0	0/0:19,0:18:35.80:0,36,1472	0/0:16,0:15:33.71:0,34,1407	0/0:9,0:9:24.08:0,24,777	0/0:21,0:20:47.77:0,48,1325	0/0:16,0:15:39.13:0,39,1201	0/0:14,0:14:36.12:0,36,1119	0/0:21,0:20:44.86:0,45,1421	0/0:12,0:10:27.09:0,27,1017	0/1:23,0:17:70.95:113,0,71	0/1:10,0:7:87.40:87,0,89	1/1:2,6:6:15.05:421,15,0	1/1:2,10:11:8.99:178,9,0	./.	0/0:11,0:10:21.07:0,21,817	./.	1/1:12,0:7:3.54:19,4,0	0/0:9,0:9:27.09:0,27,888	0/1:5,7:7:60.58:386,0,61	1/1:1,10:10:12:276,12,0	1/1:2,4:5:6.02:170,6,0
chr10	69670885	.	TCCTCCTC	T	1409.86	PASS	AB=0.811;AC=16;AF=0.308;AN=52;BaseQRankSum=5.798;DP=432;FS=18.898;HRun=0;HaplotypeScore=89.5491;InbreedingCoeff=0.7078;MQ=47.39;MQ0=47;MQRankSum=-6.544;QD=11.95;ReadPosRankSum=-1.239;VQSLOD=0.1002;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:15:18.04:0,18,381	0/0:5,0:4:12.04:0,12,349	0/0:17,0:8:21.06:0,21,475	0/0:28,0:11:30.93:0,31,694	0/0:16,0:7:15.05:0,15,359	0/0:24,0:23:55.71:0,56,1522	0/0:26,0:23:52.17:0,52,1544	1/1:24,0:23:31.05:368,31,0	0/0:20,0:18:44.66:0,45,1333	0/0:16,0:15:33.17:0,33,1292	0/0:10,0:10:24.07:0,24,756	0/0:20,0:19:42.31:0,42,1162	0/0:16,0:15:39.13:0,39,1116	0/0:13,0:13:36.12:0,36,1054	0/0:20,0:19:41.95:0,42,1233	0/0:11,0:9:27.09:0,27,914	0/1:9,14:17:63.98:223,0,64	1/1:7,4:7:9.03:190,9,0	1/1:8,0:6:15.94:227,16,0	1/1:11,0:10:6.01:80,6,0	./.	0/0:10,0:9:21.07:0,21,731	./.	1/1:12,0:7:2.57:90,3,0	0/0:11,0:11:27.08:0,27,772	0/1:12,0:7:46.91:175,0,47	1/1:11,0:10:9.02:138,9,0	1/1:6,0:5:6.02:96,6,0
chr10	69671027	.	CTCTCTCTCTCTCTCTCTCTT	C	982.78	PASS	AB=1.000;AC=20;AF=0.400;AN=50;BaseQRankSum=0.748;DP=506;FS=2.747;HRun=0;HaplotypeScore=139.3750;InbreedingCoeff=0.1565;MQ=40.21;MQ0=107;MQRankSum=1.228;QD=4.35;ReadPosRankSum=-0.249;VQSLOD=2.7738;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:17,0:13:3.55:4,0,4	0/1:11,0:9:17.15:17,0,456	./.	0/0:67,0:5:0:0,0,0	./.	0/0:25,0:23:18.30:0,18,598	0/0:16,0:13:9.86:0,10,86	./.	0/0:14,0:13:11.81:0,12,386	0/1:18,0:15:82.50:83,0,215	0/0:9,0:7:3.01:0,3,178	0/0:15,0:14:20.11:0,20,276	0/0:15,0:12:5.68:0,6,181	0/1:16,0:12:10.51:11,0,22	0/0:17,0:15:7.84:0,8,239	0/0:5,0:3:6.02:0,6,283	0/1:20,0:14:22.39:22,0,61	0/1:11,0:10:16.03:16,0,498	1/1:8,2:7:9.03:397,9,0	1/1:13,0:11:3.01:38,3,0	1/1:24,0:12:0.89:2,1,0	0/0:11,0:11:6.26:0,6,19	0/0:14,0:11:7.84:0,8,193	0/1:27,0:18:16.29:16,0,546	0/1:19,0:17:7.89:27,0,8	1/1:8,13:21:23.66:432,24,0	1/1:11,0:11:8.02:51,8,0	1/1:8,0:1:2.94:18,3,0
chr10	69671045	.	CTT	C	1195.04	PASS	AB=1.000;AC=32;AF=0.615;AN=52;BaseQRankSum=-1.726;DP=363;FS=5.062;HRun=3;HaplotypeScore=84.3540;InbreedingCoeff=0.0489;MQ=36.30;MQ0=67;MQRankSum=5.126;QD=3.91;ReadPosRankSum=5.758;VQSLOD=-0.5445;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:21,0:16:0.45:5,0,0	0/1:12,0:11:0.59:55,0,1	./.	./.	0/1:11,0:8:0:0,0,0	0/1:21,0:19:5.69:6,0,71	0/0:15,0:12:10.70:0,11,43	1/1:6,0:3:8.90:60,9,0	0/1:17,0:16:13.37:39,0,13	0/1:16,0:12:62.45:120,0,62	1/1:7,0:5:2.46:27,2,0	0/1:18,0:17:24.47:24,0,72	0/1:13,0:10:6.83:7,0,52	0/1:13,0:10:29.93:30,0,43	0/0:17,0:15:10.41:0,10,49	0/1:10,0:8:41.33:44,0,41	1/1:17,0:12:11.84:113,12,0	0/1:15,0:14:7:161,0,7	1/1:6,0:3:8.87:58,9,0	1/1:4,4:5:2.99:23,3,0	1/1:20,0:8:5.99:50,6,0	0/0:11,0:11:7.13:0,7,21	0/0:8,6:10:7.76:0,8,50	1/1:26,2:20:5.31:220,5,0	0/1:13,0:10:6:26,0,6	1/1:14,0:14:26.73:185,27,0	1/1:12,0:11:11.63:77,12,0	1/1:8,0:2:1.96:16,2,0
chr10	69671189	.	T	TA	4459.24	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-10.748;DP=477;FS=2.340;HRun=4;HaplotypeScore=52.7310;InbreedingCoeff=0.9935;MQ=87.37;MQ0=0;MQRankSum=-1.468;QD=37.16;ReadPosRankSum=0.054;VQSLOD=4.8069;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:84.22:0,84,940	0/0:5,0:5:15.04:0,15,170	0/0:21,0:20:25.46:0,25,444	0/0:26,0:25:47.96:0,48,506	0/0:22,0:22:66.16:0,66,736	0/0:23,0:23:66.19:0,66,748	0/0:14,0:14:36.08:0,36,398	1/1:2,23:25:66.22:903,66,0	0/0:19,0:19:48.11:0,48,533	0/0:20,0:20:60.17:0,60,681	0/0:21,0:21:63.16:0,63,704	0/0:17,0:17:48.07:0,48,528	0/0:12,0:12:33.09:0,33,374	0/0:14,0:14:39.07:0,39,427	0/0:10,0:10:30.09:0,30,340	0/0:13,0:13:30.08:0,30,340	0/0:8,0:8:18.05:0,18,204	0/0:18,0:18:51.15:0,51,578	1/1:1,23:24:71.91:901,72,0	1/1:2,14:16:42.14:574,42,0	1/1:0,12:12:36.12:492,36,0	0/0:16,0:16:45.13:0,45,510	0/0:13,0:13:36.09:0,36,400	0/0:18,0:18:51.13:0,51,569	0/0:17,0:17:42.12:0,42,476	1/1:1,22:23:35.17:851,35,0	1/1:0,13:13:36.12:492,36,0	1/1:0,7:7:18.06:246,18,0
chr10	69671878	.	AGGTCC	A	8585.88	PASS	AB=0.517;AC=13;AF=0.232;AN=56;BaseQRankSum=15.428;DP=709;FS=0.350;HRun=0;HaplotypeScore=145.4603;InbreedingCoeff=0.8932;MQ=78.17;MQ0=0;MQRankSum=-13.521;QD=52.04;ReadPosRankSum=0.991;VQSLOD=5.3124;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:57,0:57:99:0,172,5157	0/0:15,0:15:42.14:0,42,1327	0/0:19,0:19:57.20:0,57,1703	0/0:19,0:19:51.16:0,51,1385	0/0:35,0:35:99:0,102,3178	0/0:15,0:15:45.15:0,45,1427	0/0:31,0:31:90.29:0,90,2691	1/1:0,18:18:54.17:1130,54,0	0/0:33,0:33:99:0,99,3074	0/0:24,0:24:69.24:0,69,2094	0/0:22,0:22:66.23:0,66,2091	0/0:26,0:26:72.25:0,72,2280	0/0:30,0:30:87.30:0,87,2699	0/0:22,0:22:66.21:0,66,1979	0/0:22,0:22:66.23:0,66,2092	0/0:25,0:25:72.25:0,72,2248	0/0:24,0:24:72.25:0,72,2181	0/0:22,0:22:63.15:0,63,1813	1/1:3,22:25:66.18:1346,66,0	1/1:3,28:31:72.25:1529,72,0	1/1:2,15:17:24.08:520,24,0	0/0:29,0:29:84.29:0,84,2546	0/0:22,0:22:63.22:0,63,1916	0/0:33,0:33:93.32:0,93,2912	0/0:19,0:19:54.19:0,54,1712	0/1:2,29:31:55.14:1784,0,55	1/1:1,32:33:93.32:2016,93,0	1/1:5,4:10:12.04:260,12,0
chr10	69674406	.	A	ATG	2281.97	PASS	AB=0.758;AC=11;AF=0.196;AN=56;BaseQRankSum=6.366;DP=787;FS=1.012;HRun=0;HaplotypeScore=128.1843;InbreedingCoeff=0.3592;MQ=66.63;MQ0=4;MQRankSum=-1.779;QD=10.56;ReadPosRankSum=-0.083;VQSLOD=3.5668;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:14,18:34:26.41:334,0,26	0/0:13,0:13:36.12:0,36,477	0/0:39,0:28:51.34:0,51,638	0/0:44,0:31:67.61:0,68,834	0/1:16,18:34:68.37:353,0,68	0/0:41,0:41:99:0,110,1394	0/0:28,0:28:69.16:0,69,849	1/1:28,2:30:1.05:175,1,0	0/0:23,0:23:60.01:0,60,747	0/0:20,0:19:42.12:0,42,531	0/0:25,0:25:60.16:0,60,759	0/0:33,0:33:87.27:0,87,1131	0/0:32,0:32:90.28:0,90,1163	0/0:33,0:33:78.24:0,78,1014	0/0:30,0:30:81.10:0,81,988	0/0:26,0:26:72.24:0,72,951	0/1:21,5:25:39.18:262,0,39	0/1:30,12:42:51.16:633,0,51	0/0:15,0:15:14.18:0,14,90	0/0:22,0:22:34.09:0,34,253	0/0:37,0:36:39.99:0,40,404	0/0:30,0:30:81.23:0,81,1051	1/1:8,13:22:20.49:307,20,0	1/1:14,6:20:17.78:351,18,0	0/0:23,0:23:60.19:0,60,778	0/0:32,0:31:46.57:0,47,358	0/0:25,0:25:31.02:0,31,237	0/1:7,1:8:21.93:22,0,127
chr10	69674412	.	GTA	G	2523.82	PASS	AB=0.978;AC=14;AF=0.250;AN=56;BaseQRankSum=-1.610;DP=798;FS=0.678;HRun=0;HaplotypeScore=121.1547;InbreedingCoeff=-0.1037;MQ=62.93;MQ0=7;MQRankSum=-1.705;QD=7.17;ReadPosRankSum=-6.590;VQSLOD=1.5159;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/1:37,0:37:59.78:132,0,60	0/0:13,0:13:39.06:0,39,579	0/0:41,0:27:20.05:0,20,549	0/0:45,0:32:24.09:0,24,629	0/1:32,0:31:89.14:123,0,89	0/0:40,0:40:99:0,99,1654	0/0:29,0:29:56.90:0,57,1051	0/1:28,0:28:12.12:431,0,12	0/0:23,0:23:26.86:0,27,814	0/0:18,0:17:25.31:0,25,525	0/0:25,0:25:58.56:0,59,1051	0/0:33,0:33:89.93:0,90,1399	0/0:34,0:34:99:0,99,1528	0/0:30,0:30:70.56:0,71,1147	0/0:33,0:33:65.09:0,65,1251	0/0:28,0:28:61.98:0,62,1030	0/1:27,0:26:92.15:174,0,92	0/1:42,0:42:98.21:285,0,98	0/1:18,0:16:27.08:219,0,27	0/1:22,1:23:99:224,0,187	0/1:36,2:37:99:311,0,302	0/0:29,0:29:61.18:0,61,1269	0/1:21,0:21:1.59:63,0,2	1/1:18,1:19:6.04:146,6,0	0/0:25,0:25:75.14:0,75,1142	0/1:30,2:31:99:304,0,229	0/1:27,0:27:99:247,0,164	0/1:7,1:8:22.94:23,0,113
chr10	69674670	.	GA	G	2842.18	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=11.085;DP=642;FS=1.251;HRun=8;HaplotypeScore=70.7257;InbreedingCoeff=0.9989;MQ=78.08;MQ0=0;MQRankSum=-2.277;QD=23.49;ReadPosRankSum=0.156;VQSLOD=4.2575;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:35,1:36:70.31:0,70,1118	0/0:9,0:9:27.08:0,27,326	0/0:21,0:21:48.10:0,48,549	0/0:19,0:19:42.09:0,42,472	0/0:35,0:35:93.28:0,93,1113	0/0:23,0:23:63.19:0,63,761	0/0:24,0:24:66.19:0,66,787	0/0:25,0:25:69.21:0,69,834	0/0:17,0:17:48.15:0,48,580	0/0:32,1:33:55.27:0,55,942	0/0:17,0:17:45.14:0,45,544	0/0:24,0:24:60.18:0,60,723	0/0:14,0:14:36.10:0,36,423	0/0:29,0:29:75.22:0,75,894	0/0:26,0:26:75.23:0,75,906	0/0:25,0:25:75.22:0,75,894	0/0:22,0:22:63.19:0,63,756	0/0:22,0:22:63.19:0,63,759	1/1:0,16:16:48.07:459,48,0	1/1:3,12:15:33.05:319,33,0	1/1:1,23:24:63.10:608,63,0	0/0:28,0:28:78.23:0,78,932	0/0:18,0:18:48.15:0,48,580	0/0:30,0:30:75.23:0,75,906	0/0:23,0:23:66.19:0,66,786	1/1:3,28:31:50.89:775,51,0	1/1:3,24:27:69.11:666,69,0	1/1:0,8:8:21.03:203,21,0
chr10	69677166	.	T	TC	12340.05	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-16.586;DP=648;FS=11.215;HRun=3;HaplotypeScore=58.2495;InbreedingCoeff=0.9986;MQ=82.02;MQ0=0;MQRankSum=-2.103;QD=36.62;ReadPosRankSum=0.475;VQSLOD=4.6201;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,47:49:99:1722,123,0	0/0:6,0:6:18.06:0,18,216	0/0:21,0:21:44.99:0,45,636	0/0:26,0:26:78.21:0,78,894	1/1:2,22:24:51.13:689,51,0	0/0:12,0:12:30.09:0,30,360	0/0:28,0:28:81.25:0,81,972	1/1:3,31:34:93.30:1285,93,0	0/0:19,0:19:45.13:0,45,528	0/0:29,0:29:81.24:0,81,964	0/0:15,0:15:42.13:0,42,504	0/0:31,0:31:90.27:0,90,1078	0/0:23,0:23:69.20:0,69,816	0/0:21,0:21:63.19:0,63,756	0/0:30,0:30:81.25:0,81,972	0/0:14,0:14:42.11:0,42,492	1/1:2,24:25:63.21:882,63,0	1/1:2,15:17:39.13:546,39,0	1/1:1,19:20:57.19:797,57,0	1/1:0,18:18:48.16:672,48,0	1/1:1,46:47:99:1849,132,0	0/0:22,0:22:63.19:0,63,755	1/1:2,24:25:63.21:881,63,0	1/1:1,32:33:90.30:1260,90,0	0/0:14,0:14:36.11:0,36,432	1/1:1,20:21:63.21:873,63,0	1/1:0,12:12:36.12:504,36,0	1/1:0,10:10:27.09:378,27,0
chr10	69677325	.	CCCTCT	C	251.31	PASS	AB=0.914;AC=7;AF=0.135;AN=52;BaseQRankSum=3.358;DP=596;FS=9.417;HRun=0;HaplotypeScore=121.0018;InbreedingCoeff=0.0914;MQ=62.17;MQ0=60;MQRankSum=-2.386;QD=2.26;ReadPosRankSum=-1.414;VQSLOD=1.5998;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:17,11:22:25.88:109,0,26	0/1:7,0:6:5.06:5,0,266	0/0:59,1:22:17.74:0,18,330	0/0:98,0:32:24.05:0,24,300	0/1:13,0:12:13.07:119,0,13	0/0:9,0:7:17.88:0,18,249	0/0:31,0:24:42.12:0,42,1024	0/0:36,0:27:59.06:0,59,1055	0/0:17,0:17:33.10:0,33,715	0/0:21,0:21:45.13:0,45,940	0/0:14,0:14:18:0,18,309	0/0:13,0:13:18.39:0,18,723	0/0:15,0:11:2.77:0,3,363	0/0:6,0:6:12.04:0,12,257	0/0:22,0:17:30.06:0,30,614	0/0:9,0:9:15.04:0,15,322	0/0:23,0:16:30.10:0,30,744	0/0:9,0:5:9.03:0,9,255	0/0:12,0:4:3.62:0,4,30	0/1:12,1:13:21.09:21,0,84	1/1:38,0:24:5.78:71,6,0	0/0:31,0:29:27.99:0,28,938	0/0:19,0:15:27.22:0,27,627	0/0:12,0:12:18.31:0,18,346	0/0:25,0:22:16.81:0,17,974	0/1:11,1:7:25.90:48,0,26	./.	./.
chr10	69679149	.	TC	T	5760.53	PASS	AB=0.583;AC=25;AF=0.446;AN=56;BaseQRankSum=6.609;DP=684;FS=0.770;HRun=8;HaplotypeScore=148.0097;InbreedingCoeff=0.9090;MQ=74.98;MQ0=0;MQRankSum=-2.924;QD=21.99;ReadPosRankSum=3.203;VQSLOD=3.2357;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:3,10:13:27.03:256,27,0	0/0:14,0:14:32.81:0,33,364	0/0:39,1:28:40.12:0,40,414	0/0:47,0:37:53.11:0,53,516	1/1:5,17:22:33.94:320,34,0	0/0:26,0:26:60.21:0,60,739	0/0:30,0:29:72.01:0,72,813	1/1:6,12:18:25.14:373,25,0	0/0:22,0:22:60.05:0,60,673	0/0:23,0:23:51.17:0,51,675	0/0:23,0:23:46.34:0,46,591	0/0:32,0:32:82.49:0,82,1064	0/0:29,0:29:78.15:0,78,899	0/0:30,0:30:83.57:0,84,951	0/0:32,0:33:95.79:0,96,1103	0/0:22,0:22:63.07:0,63,712	1/1:0,35:35:99:983,102,0	1/1:2,19:21:56.96:536,57,0	1/1:1,12:13:36.05:347,36,0	1/1:10,17:27:54.53:472,55,0	1/1:2,15:17:47.97:439,48,0	0/0:21,0:21:44.43:0,44,524	1/1:8,22:30:62.95:583,63,0	1/1:0,31:31:81.12:781,81,0	0/0:27,0:26:49.29:0,49,589	0/1:6,15:21:18.02:389,0,18	1/1:4,8:11:11.55:223,12,0	1/1:0,2:2:6.01:58,6,0
chr10	69679206	.	GA	G	4737.01	PASS	AC=14;AF=0.259;AN=54;BaseQRankSum=7.330;DP=709;FS=52.529;HRun=2;HaplotypeScore=92.9875;InbreedingCoeff=0.9989;MQ=83.31;MQ0=0;MQRankSum=-2.206;QD=33.13;ReadPosRankSum=2.178;VQSLOD=0.9632;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,29:29:69.22:895,69,0	0/0:7,0:7:21.07:0,21,313	0/0:18,0:18:50.38:0,50,717	0/0:31,0:31:87.08:0,87,1250	1/1:0,18:18:45.14:583,45,0	0/0:28,0:28:84.28:0,84,1256	0/0:29,0:29:84.27:0,84,1237	0/0:34,0:34:99:0,99,1463	0/0:32,0:32:93.32:0,93,1392	0/0:22,0:22:66.22:0,66,972	0/0:19,0:19:57.19:0,57,854	0/0:39,0:39:99:0,114,1704	0/0:37,0:37:99:0,111,1656	0/0:40,0:40:99:0,114,1708	0/0:33,0:33:96.32:0,96,1433	0/0:26,0:26:78.26:0,78,1168	0/0:47,0:47:99:0,135,1996	0/0:30,0:30:84.28:0,84,1254	1/1:2,14:16:42.14:545,42,0	1/1:2,18:20:51.17:662,51,0	1/1:1,21:22:54.17:694,54,0	0/0:17,0:17:51.16:0,51,745	0/0:21,0:21:60.20:0,60,898	0/0:44,0:44:99:0,105,1572	0/0:12,0:12:36.12:0,36,539	1/1:1,22:23:24.26:812,24,0	1/1:1,14:15:42.14:545,42,0	./.
chr10	69679796	.	TC	T	7621.13	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=13.273;DP=671;FS=0.945;HRun=8;HaplotypeScore=68.0886;InbreedingCoeff=0.9969;MQ=83.36;MQ0=0;MQRankSum=-2.080;QD=24.51;ReadPosRankSum=1.992;VQSLOD=5.6722;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,44:49:99:1187,123,0	0/0:9,0:9:27.07:0,27,315	0/0:23,0:23:60.07:0,60,670	0/0:23,0:23:14.01:0,14,395	1/1:1,18:19:51.08:492,51,0	0/0:26,0:26:72.20:0,72,849	0/0:34,0:34:87.26:0,87,1039	1/1:5,31:36:70.38:841,70,0	0/0:27,0:27:81.23:0,81,963	0/0:20,0:20:57.13:0,57,671	0/0:13,0:13:36.08:0,36,419	0/0:22,0:22:57.17:0,57,688	0/0:22,0:22:57.17:0,57,687	0/0:28,0:28:78.23:0,78,930	0/0:32,0:32:90.28:0,90,1087	0/0:31,0:31:93.27:0,93,1110	1/1:2,21:23:60.09:579,60,0	1/1:0,20:20:51.08:493,51,0	1/1:0,14:14:39.06:377,39,0	1/1:0,19:19:51.08:492,51,0	1/1:3,32:35:90.14:869,90,0	0/0:26,0:26:75.19:0,75,871	1/1:1,16:17:45.07:434,45,0	1/1:1,18:19:54.09:521,54,0	0/0:24,0:24:63.15:0,63,722	1/1:4,18:22:29.35:468,29,0	1/1:3,23:26:60.09:578,60,0	1/1:0,12:12:30.05:290,30,0
chr10	69680120	.	AGAGCGAGC	A	4519.94	PASS	AB=1.000;AC=16;AF=0.296;AN=54;BaseQRankSum=-0.902;DP=628;FS=8.802;HRun=0;HaplotypeScore=131.3171;InbreedingCoeff=0.4477;MQ=70.58;MQ0=25;MQRankSum=-1.738;QD=20.93;ReadPosRankSum=-2.844;VQSLOD=3.3129;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:12,28:38:3.01:83,3,0	0/0:9,0:9:12.38:0,12,165	0/0:48,0:13:2.72:0,3,277	0/0:66,0:27:39.53:0,40,554	./.	0/0:23,0:22:32.64:0,33,587	0/0:20,0:19:45.13:0,45,1106	1/1:23,0:22:51.08:889,51,0	0/0:26,0:25:51.16:0,51,967	0/0:18,0:18:44.93:0,45,788	0/0:15,0:15:25.14:0,25,360	0/0:22,0:22:42.02:0,42,695	0/0:25,0:25:54.08:0,54,847	0/0:23,0:23:41.82:0,42,774	0/0:19,0:19:45.01:0,45,999	0/0:22,0:22:47.88:0,48,945	0/0:27,0:27:0:0,0,0	0/1:16,0:16:19.59:438,0,20	1/1:15,0:15:40.32:606,40,0	1/1:19,0:18:36.12:588,36,0	0/1:18,0:18:65.94:305,0,66	0/0:20,0:20:39.37:0,39,683	0/1:14,0:13:0.07:1,0,0	0/1:22,0:21:26.16:412,0,26	0/0:15,0:15:30.57:0,31,421	0/1:22,0:22:99:551,0,123	0/1:20,0:19:67.86:399,0,68	1/1:7,0:7:15.04:248,15,0
chr10	69680122	.	AGCGAGC	A	5251.33	PASS	AB=0.847;AC=23;AF=0.426;AN=54;BaseQRankSum=-1.677;DP=607;FS=0.438;HRun=0;HaplotypeScore=109.1709;InbreedingCoeff=0.7475;MQ=72.77;MQ0=25;MQRankSum=-1.969;QD=21.79;ReadPosRankSum=-4.155;VQSLOD=3.3724;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:33,0:31:3.01:52,3,0	0/1:8,0:8:24.11:24,0,148	0/0:50,0:14:8.44:0,8,322	0/0:67,0:28:42.93:0,43,594	./.	0/0:22,0:21:32.64:0,33,520	0/0:19,0:18:45.13:0,45,987	1/1:24,0:23:56.84:951,57,0	0/0:25,0:24:54.16:0,54,904	0/0:17,0:17:44.05:0,44,724	0/0:14,0:14:25.14:0,25,360	0/0:20,0:20:42.02:0,42,649	0/0:25,0:25:57.07:0,57,837	0/0:23,0:23:50.62:0,51,792	0/0:19,0:19:47.88:0,48,859	0/0:21,0:21:47.41:0,47,853	1/1:5,0:25:3.01:30,3,0	1/1:16,0:16:23.42:530,23,0	1/1:1,14:15:42.10:644,42,0	1/1:17,0:16:36.12:588,36,0	1/1:19,0:19:22.66:532,23,0	0/0:18,0:18:37.29:0,37,571	0/1:2,11:12:0.07:1,0,0	1/1:20,0:19:11.74:425,12,0	0/0:12,0:12:30.09:0,30,421	0/1:20,0:20:24.09:603,0,24	1/1:23,0:22:10.54:575,11,0	1/1:8,0:8:18.53:296,19,0
chr10	69682076	.	AGGGTG	A	4984.93	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=12.012;DP=691;FS=0.914;HRun=0;HaplotypeScore=132.2743;InbreedingCoeff=0.9988;MQ=64.49;MQ0=1;MQRankSum=-2.865;QD=43.35;ReadPosRankSum=2.925;VQSLOD=4.6506;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:32,0:32:78.27:0,78,2327	0/0:9,0:9:21.07:0,21,640	0/0:29,0:25:69.24:0,69,1836	0/0:22,0:21:56.05:0,56,1517	0/0:23,0:23:57.15:0,57,1562	0/0:21,0:21:48.16:0,48,1430	0/0:29,0:29:78.27:0,78,2347	0/0:27,0:27:63.22:0,63,1869	0/0:27,0:27:75.26:0,75,2216	0/0:25,0:25:66.23:0,66,1973	0/0:22,0:22:60.21:0,60,1789	0/0:20,0:20:54.19:0,54,1642	0/0:20,0:20:51.16:0,51,1490	0/0:26,0:26:69.24:0,69,2105	0/0:25,0:25:69.24:0,69,2106	0/0:24,0:24:72.24:0,72,2132	1/1:8,22:30:57.19:1169,57,0	1/1:4,23:27:66.23:1354,66,0	0/0:16,0:15:42.14:0,42,1283	0/0:33,0:33:87.27:0,87,2506	0/0:45,0:45:99:0,99,3016	0/0:20,0:20:60.21:0,60,1788	1/1:4,23:27:57.19:1169,57,0	1/1:5,26:31:63.33:1293,63,0	0/0:18,0:18:48.16:0,48,1465	0/0:19,0:19:45.15:0,45,1373	0/0:27,0:27:75.26:0,75,2249	0/0:17,0:17:48.16:0,48,1463
chr10	69682543	.	TCC	T	3863.39	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=13.039;DP=694;FS=7.456;HRun=5;HaplotypeScore=87.3986;InbreedingCoeff=0.9912;MQ=87.49;MQ0=0;MQRankSum=-3.604;QD=37.15;ReadPosRankSum=3.524;VQSLOD=2.8539;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:52,0:52:99:0,157,2821	0/0:9,0:9:27.07:0,27,463	0/0:26,0:26:72.14:0,72,1262	0/0:22,0:22:56.85:0,57,974	0/0:31,0:31:93.32:0,93,1702	0/0:25,0:25:75.25:0,75,1324	0/0:36,0:36:99:0,108,1960	0/0:29,0:29:78.27:0,78,1421	0/0:30,0:30:84.29:0,84,1525	0/0:23,0:23:69.24:0,69,1254	0/0:15,0:15:45.15:0,45,801	0/0:29,0:29:81.28:0,81,1476	0/0:30,0:30:90.28:0,90,1579	0/0:17,0:17:51.17:0,51,928	0/0:23,0:23:69.24:0,69,1265	0/0:21,0:21:60.21:0,60,1100	1/1:0,28:28:78.26:1092,78,0	1/1:0,17:17:48.16:672,48,0	0/0:22,0:22:63.22:0,63,1155	0/0:19,0:19:54.19:0,54,990	0/0:25,0:25:69.24:0,69,1250	0/0:23,0:23:66.23:0,66,1198	1/1:2,18:20:51.64:714,52,0	1/1:1,38:39:99:1386,99,0	0/0:28,0:28:70.32:0,70,1427	0/0:27,0:27:81.28:0,81,1452	0/0:24,0:23:72.25:0,72,1320	0/0:4,0:4:12.04:0,12,220
chr10	69683134	.	A	AT	2204.97	PASS	AB=0.581;AC=11;AF=0.196;AN=56;BaseQRankSum=-8.771;DP=556;FS=12.067;HRun=9;HaplotypeScore=58.8874;InbreedingCoeff=0.8715;MQ=81.10;MQ0=0;MQRankSum=-0.174;QD=21.20;ReadPosRankSum=-1.478;VQSLOD=3.1039;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:31:80.97:0,81,703	0/0:9,0:9:20.99:0,21,182	0/0:21,0:21:32.86:0,33,276	0/0:16,0:15:23.93:0,24,196	0/0:15,0:15:35.99:0,36,313	0/0:32,0:32:83.95:0,84,729	0/0:14,0:14:34.07:0,34,331	0/0:38,0:38:94.77:0,95,809	0/0:26,0:26:65.90:0,66,573	0/0:23,0:23:59.92:0,60,512	0/0:20,0:20:53.95:0,54,461	0/0:22,0:24:67.01:0,67,551	0/0:24,0:24:46.04:0,46,527	0/0:22,0:22:62.97:0,63,543	0/0:16,0:16:44.99:0,45,391	0/0:18,0:18:47.99:0,48,417	0/0:20,0:20:53.99:0,54,469	0/0:13,0:13:32.99:0,33,286	1/1:4,15:19:24.89:475,25,0	1/1:4,20:24:56.99:610,57,0	1/1:0,14:14:30.08:332,30,0	0/0:18,0:18:41.97:0,42,364	0/0:13,0:13:38.99:0,39,339	0/0:21,0:21:53.99:0,54,469	0/0:18,0:18:48.86:0,49,415	0/1:5,13:18:30.07:371,0,30	1/1:3,17:20:45.12:493,45,0	1/1:0,9:9:9.02:99,9,0
chr10	69683358	.	TACAC	T	104.62	PASS	AB=0.902;AC=6;AF=0.120;AN=50;BaseQRankSum=0.020;DP=492;FS=1.510;HRun=0;HaplotypeScore=79.5471;InbreedingCoeff=-0.0474;MQ=67.62;MQ0=16;MQRankSum=-0.401;QD=1.11;ReadPosRankSum=1.134;VQSLOD=1.3910;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:29:23.26:0,23,261	0/0:5,0:5:3.01:0,3,68	./.	./.	0/0:20,0:20:12.02:0,12,176	0/1:25,1:26:93.37:93,0,294	0/0:24,0:24:19.45:0,19,111	0/0:18,0:18:2.96:0,3,20	0/0:14,0:14:6.02:0,6,111	0/0:19,0:19:18.67:0,19,200	0/0:6,0:5:3.01:0,3,53	0/0:15,0:16:15.04:0,15,245	0/0:15,0:17:12.62:0,13,107	0/0:18,1:19:17.01:0,17,347	0/0:14,0:15:17.79:0,18,319	0/0:8,0:8:9.03:0,9,211	0/0:6,0:7:2.96:0,3,19	0/0:12,0:12:2.98:0,3,22	0/0:14,0:13:5.94:0,6,43	0/0:9,0:9:5.57:0,6,31	0/1:26,0:26:3.52:4,0,53	0/0:23,0:23:5.69:0,6,81	./.	0/0:16,0:16:2.77:0,3,24	0/0:11,0:11:10.34:0,10,215	1/1:14,0:14:1.49:4,1,0	0/1:10,6:19:15.48:57,0,15	0/1:8,0:8:22.94:47,0,23
chr10	69683733	.	A	AC	5267.38	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-14.633;DP=702;FS=4.562;HRun=2;HaplotypeScore=67.2844;InbreedingCoeff=0.9756;MQ=81.96;MQ0=0;MQRankSum=-1.554;QD=41.80;ReadPosRankSum=3.013;VQSLOD=4.9399;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:84.22:0,84,1132	0/0:4,0:4:12.04:0,12,167	0/0:19,0:19:54.15:0,54,719	0/0:18,0:18:43.96:0,44,592	0/0:32,0:32:87.29:0,87,1208	0/0:23,0:23:66.19:0,66,885	0/0:34,0:34:99:0,102,1409	0/0:22,0:22:60.20:0,60,837	0/0:26,0:26:78.26:0,78,1087	0/0:35,0:35:99:0,105,1466	0/0:13,0:13:39.13:0,39,544	0/0:23,0:23:69.23:0,69,960	0/0:34,0:34:99:0,102,1423	0/0:23,0:23:69.22:0,69,948	0/0:23,0:23:69.23:0,69,964	0/0:27,0:27:81.27:0,81,1133	1/1:0,39:39:99:1725,108,0	1/1:0,25:25:66.23:1055,66,0	0/0:17,0:17:51.10:0,51,688	0/0:23,0:23:69.20:0,69,922	0/0:42,0:42:99:0,123,1701	0/0:30,0:30:78.24:0,78,1070	1/1:1,23:24:57.19:906,57,0	1/1:0,37:38:99:1581,99,0	0/0:24,0:24:72.24:0,72,1004	0/0:34,0:34:99:0,99,1380	0/0:19,0:19:57.17:0,57,777	0/0:3,0:3:9.03:0,9,126
chr10	69685084	.	G	GA	13841.51	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-11.730;DP=783;FS=11.678;HRun=3;HaplotypeScore=84.0910;InbreedingCoeff=0.9899;MQ=80.61;MQ0=0;MQRankSum=-6.230;QD=34.60;ReadPosRankSum=1.269;VQSLOD=4.6044;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,43:47:99:1511,108,0	0/0:14,0:14:42.13:0,42,504	0/0:23,0:23:57.91:0,58,587	0/0:22,0:22:57.14:0,57,641	1/1:2,30:32:81.16:1087,81,0	0/0:14,0:14:39.12:0,39,468	0/0:31,0:31:90.23:0,90,1035	1/1:1,44:44:99:1713,129,0	0/0:19,0:19:54.15:0,54,636	0/0:29,0:29:75.23:0,75,896	0/0:29,0:29:78.24:0,78,934	0/0:22,0:22:60.18:0,60,719	0/0:27,0:27:78.23:0,78,926	0/0:29,0:29:78.19:0,78,909	0/0:44,0:44:99:0,123,1453	0/0:27,0:27:78.24:0,78,932	1/1:0,33:33:81.27:1134,81,0	1/1:6,18:24:72.14:946,72,0	1/1:3,21:23:63.17:859,63,0	1/1:2,28:30:75.08:962,75,0	1/1:6,33:39:93.31:1302,93,0	0/0:29,0:29:84.26:0,84,1008	1/1:0,23:24:57.19:788,57,0	1/1:2,21:23:60.20:840,60,0	0/0:24,0:24:69.21:0,69,828	1/1:5,26:31:15.27:1048,15,0	1/1:2,41:43:99:1527,111,0	1/1:2,3:5:9.03:126,9,0
chr10	69685171	.	GTCTATCTA	G	309.06	PASS	AC=8;AF=0.154;AN=52;BaseQRankSum=2.777;DP=740;FS=4.807;HRun=0;HaplotypeScore=232.5179;InbreedingCoeff=0.7990;MQ=54.74;MQ0=11;MQRankSum=-0.060;QD=3.36;ReadPosRankSum=1.790;VQSLOD=2.5231;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:34.97:0,35,782	0/0:10,0:10:18.06:0,18,669	./.	./.	0/0:31,0:30:48.16:0,48,1322	0/0:25,0:25:51.16:0,51,1525	0/0:29,0:26:21.07:0,21,507	1/1:40,0:30:2.84:19,3,0	0/0:27,0:26:18.03:0,18,235	0/0:47,0:46:51.14:0,51,1353	0/0:22,0:23:27.08:0,27,743	0/0:32,0:32:45.15:0,45,1316	0/0:28,0:28:36.08:0,36,1034	0/0:37,0:37:60.19:0,60,1762	0/0:40,0:40:63.16:0,63,1649	0/0:29,0:29:39.13:0,39,1246	0/0:11,0:13:7.02:0,7,33	1/1:17,0:16:8.90:123,9,0	0/0:13,0:10:11.99:0,12,229	0/0:38,0:37:14.71:0,15,240	0/0:26,0:24:14.82:0,15,181	0/0:19,0:17:27.09:0,27,827	1/1:14,8:22:12.04:277,12,0	1/1:13,0:13:2.97:20,3,0	0/0:41,0:42:57.17:0,57,1626	0/0:42,0:40:48.56:0,49,1084	0/0:23,0:21:14.82:0,15,455	0/0:8,0:8:9.97:0,10,85
chr10	69685226	.	ATCTGTCTATCTG	A	488.72	PASS	AB=0.875;AC=5;AF=0.093;AN=54;BaseQRankSum=2.916;DP=704;FS=18.883;HRun=0;HaplotypeScore=272.5772;InbreedingCoeff=0.6107;MQ=50.57;MQ0=9;MQRankSum=-2.900;QD=12.22;ReadPosRankSum=-0.870;VQSLOD=0.9904;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:26.31:0,26,496	0/0:17,0:17:36.12:0,36,1495	0/0:12,0:3:6.02:0,6,157	0/0:13,0:8:15.05:0,15,314	0/0:33,0:32:41.78:0,42,836	0/0:23,0:22:45.15:0,45,1770	0/0:25,0:22:33.11:0,33,1318	0/0:38,0:29:42.11:0,42,945	0/0:29,0:28:51.18:0,51,2335	0/0:50,0:48:99:0,120,5045	0/0:24,0:24:57.20:0,57,2553	0/0:31,0:31:69.24:0,69,3050	0/0:30,0:30:69.24:0,69,3032	0/0:30,0:30:72.25:0,72,3113	0/0:72,0:71:99:0,193,8233	0/0:18,0:18:39.13:0,39,1695	1/1:5,2:6:3.01:105,3,0	0/1:6,1:7:1.25:403,0,1	0/0:18,0:14:24.04:0,24,436	0/0:26,0:25:22.26:0,22,419	0/0:19,0:18:8.32:0,8,171	0/0:22,0:21:54.17:0,54,2147	1/1:16,10:23:0.32:83,0,0	./.	0/0:27,0:27:48.16:0,48,2208	0/0:30,0:28:50.90:0,51,916	0/0:27,0:26:48.12:0,48,857	0/0:13,0:13:23.42:0,23,316
chr10	69685228	.	CTGTCT	C	195.22	PASS	AB=1.000;AC=4;AF=0.074;AN=54;BaseQRankSum=3.829;DP=704;FS=18.333;HRun=0;HaplotypeScore=193.2760;InbreedingCoeff=0.2789;MQ=50.80;MQ0=8;MQRankSum=-2.779;QD=5.01;ReadPosRankSum=-0.283;VQSLOD=1.5294;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:30,1:31:39.26:0,39,557	0/0:18,0:18:54.19:0,54,1617	0/0:14,0:3:6.02:0,6,166	0/0:13,0:8:21.06:0,21,453	0/0:31,0:30:52.62:0,53,818	0/0:23,0:22:63.17:0,63,1809	0/0:24,0:22:48.16:0,48,1462	0/0:37,0:28:78.27:0,78,2042	0/0:22,4:27:51.17:0,51,1672	0/0:48,0:46:99:0,138,4385	0/0:23,0:23:69.24:0,69,2184	0/0:31,0:31:90.31:0,90,2778	0/0:31,0:31:84.29:0,84,2655	0/0:30,0:30:87.30:0,87,2729	0/0:75,0:74:99:0,220,6978	0/0:21,0:21:63.22:0,63,1881	0/1:6,0:5:32.38:32,0,144	0/1:7,0:7:58.88:202,0,59	0/0:18,0:14:42.10:0,42,677	0/0:26,0:25:33.57:0,34,481	0/0:19,0:18:17.73:0,18,322	0/0:20,0:20:60.19:0,60,1885	1/1:26,0:23:2.47:62,2,0	./.	0/0:28,0:28:78.26:0,78,2242	0/0:30,0:28:77.01:0,77,1067	0/0:29,0:28:71.99:0,72,928	0/0:13,0:13:27.05:0,27,308
chr10	69685234	.	ATCTG	A	5316.10	PASS	AB=1.000;AC=21;AF=0.389;AN=54;BaseQRankSum=14.871;DP=710;FS=2.259;HRun=0;HaplotypeScore=167.2305;InbreedingCoeff=0.8663;MQ=50.75;MQ0=9;MQRankSum=-0.767;QD=22.34;ReadPosRankSum=1.222;VQSLOD=4.9001;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:12,18:30:31.31:591,31,0	0/0:17,0:17:48.12:0,48,1096	0/0:17,0:4:9.03:0,9,190	0/0:19,0:11:12.71:0,13,352	1/1:8,22:29:48.71:782,49,0	0/0:20,0:19:51.14:0,51,1192	0/0:22,0:20:42.13:0,42,997	0/0:35,0:27:68.28:0,68,1211	0/0:29,0:28:57.20:0,57,1432	0/0:46,0:46:99:0,129,3159	0/0:23,0:23:69.19:0,69,1593	0/0:32,0:32:84.27:0,84,2038	0/0:33,0:33:81.26:0,81,1936	0/0:32,0:32:90.29:0,90,2131	0/0:77,0:76:99:0,223,5493	0/0:21,0:21:57.18:0,57,1342	0/1:7,0:6:17.99:21,0,18	1/1:7,0:7:12.66:88,13,0	1/1:11,8:14:12.11:472,12,0	1/1:4,21:24:31.29:478,31,0	1/1:14,5:18:14.51:259,15,0	0/0:19,0:19:57.20:0,57,1438	1/1:30,0:28:1.45:22,1,0	./.	0/0:26,0:26:66.18:0,66,1485	1/1:13,16:27:71.59:1153,72,0	1/1:8,18:25:63.14:1028,63,0	1/1:1,14:15:24.08:423,24,0
chr10	69685254	.	G	GTCTA	834.12	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-7.166;DP=772;FS=19.397;HRun=0;HaplotypeScore=195.8003;InbreedingCoeff=0.7048;MQ=52.51;MQ0=12;MQRankSum=-6.153;QD=21.95;ReadPosRankSum=-4.687;VQSLOD=1.1051;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:41.22:0,41,665	0/0:17,0:17:45.11:0,45,729	0/0:27,0:8:17.80:0,18,269	0/0:24,0:15:31.73:0,32,376	0/0:32,0:32:58.44:0,58,885	0/0:17,0:17:39.09:0,39,589	0/0:26,0:26:57.18:0,57,936	1/1:15,20:32:54.11:928,54,0	0/0:35,0:35:81.22:0,81,1306	0/0:48,0:47:99:0,123,1991	0/0:24,0:24:69.13:0,69,1116	0/0:33,0:33:93.32:0,93,1609	0/0:33,0:33:93.26:0,93,1531	0/0:36,0:36:90.27:0,90,1494	0/0:89,0:88:99:0,238,3888	0/0:23,0:23:63.21:0,63,1065	0/0:3,0:3:5.88:0,6,50	0/0:6,0:6:17.13:0,17,193	0/0:18,0:14:33.11:0,33,535	0/0:35,0:34:55.66:0,56,799	0/0:15,0:15:16.98:0,17,299	0/0:28,0:28:69.14:0,69,1053	0/0:27,0:25:1.42:0,1,51	0/0:7,0:7:0:0,0,0	0/0:26,0:26:66.18:0,66,1046	0/0:32,0:32:87.13:0,87,1333	0/0:29,0:28:68.99:0,69,1095	0/0:14,0:14:29.96:0,30,371
chr10	69685277	.	ATCTG	A	228.08	PASS	AB=0.867;AC=6;AF=0.111;AN=54;BaseQRankSum=5.776;DP=833;FS=10.612;HRun=0;HaplotypeScore=207.4994;InbreedingCoeff=0.5245;MQ=52.00;MQ0=19;MQRankSum=-5.830;QD=2.72;ReadPosRankSum=-0.039;VQSLOD=1.4719;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:30:31.96:0,32,458	0/0:14,0:14:39.05:0,39,776	0/1:28,0:5:2.95:3,0,66	0/0:24,0:8:11.89:0,12,87	0/0:31,0:31:46.36:0,46,811	0/0:17,0:17:45.14:0,45,972	0/0:27,0:27:57.12:0,57,1190	0/0:49,0:39:84.07:0,84,941	0/0:36,0:35:84.17:0,84,1685	0/0:47,0:45:99:0,105,2266	0/0:32,0:32:78.14:0,78,1404	0/0:34,0:34:87.22:0,87,1878	0/0:29,0:29:72.13:0,72,1433	0/0:30,0:30:78.14:0,78,1568	0/0:90,0:89:99:0,240,4516	0/0:23,0:23:66.18:0,66,1472	1/1:6,4:9:2.77:52,3,0	0/1:7,4:11:13.80:211,0,14	0/0:20,0:15:35.45:0,35,518	0/0:37,0:36:95.98:0,96,1684	0/0:30,0:29:29.82:0,30,617	0/0:29,0:28:72.16:0,72,1482	1/1:19,16:33:5.89:72,6,0	./.	0/0:31,0:31:78.19:0,78,1634	0/0:37,0:36:90.13:0,90,1760	0/0:28,0:27:58.54:0,59,1116	0/0:15,0:15:22.46:0,22,529
chr10	69685308	.	T	TATCA	1609.60	PASS	AB=0.942;AC=7;AF=0.130;AN=54;BaseQRankSum=-1.051;DP=792;FS=1.707;HRun=0;HaplotypeScore=211.1390;InbreedingCoeff=0.0236;MQ=49.66;MQ0=22;MQRankSum=-9.183;QD=8.25;ReadPosRankSum=-6.307;VQSLOD=0.8474;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:21:11.82:0,12,117	0/0:13,0:13:39.09:0,39,644	0/0:26,0:3:8.82:0,9,123	./.	0/0:26,0:26:29.64:0,30,274	0/0:20,0:20:57.11:0,57,943	0/0:30,0:30:72.13:0,72,1001	0/1:17,36:42:16.30:1476,0,16	0/0:37,0:36:96.23:0,96,1531	0/0:43,0:41:99:0,108,1755	0/0:27,0:26:78.17:0,78,1219	0/0:33,0:33:93.24:0,93,1488	0/0:25,0:25:75.16:0,75,1185	0/0:31,0:31:78.19:0,78,1245	0/0:63,0:63:99:0,171,2911	0/0:29,0:29:69.17:0,69,1110	0/1:14,0:11:3.81:32,0,4	0/0:13,0:13:5.59:0,6,89	0/1:18,0:17:84.56:85,0,194	0/0:41,0:38:41.58:0,42,483	0/0:26,0:24:19.94:0,20,187	0/0:29,0:28:84.19:0,84,1305	0/1:36,0:35:14.24:40,0,14	0/1:10,0:10:0.20:0,0,0	0/0:28,0:28:66.09:0,66,1058	0/1:38,0:36:81.55:82,0,390	0/1:26,0:25:15.38:15,0,282	0/0:15,0:15:2.92:0,3,146
chr10	69685332	.	GTCTATCTA	G	3147.82	PASS	AB=0.727;AC=15;AF=0.288;AN=52;BaseQRankSum=9.880;DP=746;FS=1.777;HRun=0;HaplotypeScore=223.2689;InbreedingCoeff=0.7629;MQ=50.62;MQ0=24;MQRankSum=-3.881;QD=15.28;ReadPosRankSum=1.874;VQSLOD=2.8224;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:20,7:25:3.05:197,3,0	0/0:16,0:16:36.12:0,36,1201	./.	./.	1/1:17,12:28:10.40:242,10,0	0/0:27,0:26:63.22:0,63,2214	0/0:24,0:24:45.10:0,45,1269	0/0:27,0:18:2.96:0,3,21	0/0:39,0:37:69.22:0,69,2434	0/0:44,0:43:93.31:0,93,3171	0/0:32,0:31:72.23:0,72,2358	0/0:29,0:29:63.22:0,63,2158	0/0:23,0:23:45.15:0,45,1576	0/0:35,0:35:66.23:0,66,2249	0/0:56,0:56:99:0,102,3496	0/0:31,0:31:60.21:0,60,2136	0/0:13,0:11:6.44:0,6,66	0/0:13,0:12:14.71:0,15,253	1/1:17,3:18:18.06:401,18,0	1/1:30,10:37:25.65:503,26,0	1/1:25,1:25:12.85:203,13,0	0/0:28,0:28:54.19:0,54,1806	0/0:31,0:30:6.02:0,6,135	0/0:9,0:9:0.47:0,0,1	0/0:33,0:33:69.02:0,69,2091	0/1:20,12:31:66.88:1119,0,67	1/1:14,7:20:17.65:387,18,0	1/1:8,2:10:13.75:275,14,0
chr10	69685362	.	CT	C	661.65	PASS	AB=0.917;AC=9;AF=0.167;AN=54;BaseQRankSum=9.265;DP=703;FS=0.568;HRun=1;HaplotypeScore=128.6534;InbreedingCoeff=0.2035;MQ=50.45;MQ0=17;MQRankSum=-2.684;QD=3.76;ReadPosRankSum=-1.666;VQSLOD=-0.5365;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:27,2:28:23.82:24,0,225	0/0:17,0:17:51.17:0,51,799	./.	0/0:8,0:2:6.02:0,6,88	0/1:33,2:33:41.48:41,0,414	0/0:28,0:27:81.28:0,81,1273	0/0:29,0:29:81.20:0,81,1176	0/0:22,0:11:33.08:0,33,460	0/0:38,0:36:96.28:0,96,1440	0/0:46,0:45:99:0,135,2062	0/0:41,0:40:99:0,120,1835	0/0:35,0:35:99:0,102,1545	0/0:22,0:22:60.19:0,60,921	0/0:34,0:34:93.32:0,93,1454	0/0:45,0:45:99:0,135,2070	0/0:26,0:26:78.27:0,78,1223	0/0:10,0:8:6.02:0,6,76	0/0:11,0:10:10.59:0,11,180	0/0:17,0:12:17.12:0,17,278	1/1:23,7:27:2.35:266,2,0	0/1:15,4:18:52.89:149,0,53	0/0:28,0:28:81.28:0,81,1257	0/0:22,0:21:5.57:0,6,93	0/0:9,0:9:0.47:0,0,1	0/0:30,0:30:78.24:0,78,1199	0/1:29,3:31:99:129,0,459	0/1:24,1:24:60.34:60,0,332	1/1:3,3:6:7.99:127,8,0
chr10	69685399	.	GTCTATCTA	G	2986.83	PASS	AB=0.763;AC=9;AF=0.161;AN=56;BaseQRankSum=6.334;DP=731;FS=13.308;HRun=0;HaplotypeScore=198.0630;InbreedingCoeff=0.6779;MQ=52.49;MQ0=13;MQRankSum=-9.456;QD=24.28;ReadPosRankSum=-0.741;VQSLOD=2.3040;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:21,0:31:31.74:0,32,286	0/0:20,0:20:48.16:0,48,1561	0/0:16,0:5:8.72:0,9,171	0/0:20,0:4:2.99:0,3,41	0/0:12,0:33:41.95:0,42,398	0/0:29,0:28:54.17:0,54,1718	0/0:31,0:31:81.28:0,81,2746	1/1:28,1:19:33.11:619,33,0	0/0:33,0:32:63.22:0,63,2268	0/0:46,0:46:99:0,105,3765	0/0:35,0:35:87.28:0,87,2770	0/0:42,0:42:99:0,102,3748	0/0:27,0:27:63.20:0,63,2106	0/0:28,0:28:63.22:0,63,2400	0/0:48,0:48:99:0,99,3698	0/0:21,0:21:45.15:0,45,1596	0/0:9,0:8:7.22:0,7,59	0/0:9,0:9:17.92:0,18,233	1/1:9,7:13:24.08:607,24,0	0/0:9,23:32:0.45:0,0,1	1/1:17,1:17:12.25:218,12,0	0/0:32,0:32:75.23:0,75,2631	0/0:14,0:15:2.30:0,2,49	0/0:8,0:8:3.01:0,3,49	0/0:37,0:37:75.26:0,75,2567	0/1:20,9:29:19.62:1133,0,20	1/1:4,27:31:23.80:566,24,0	0/0:3,0:3:0.47:0,0,1
chr10	69685453	.	ATC	A	1692.07	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=7.611;DP=795;FS=3.409;HRun=0;HaplotypeScore=136.1482;InbreedingCoeff=0.9510;MQ=75.24;MQ0=6;MQRankSum=-2.881;QD=21.15;ReadPosRankSum=1.467;VQSLOD=3.8746;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:63.19:0,63,1045	0/0:11,0:11:30.10:0,30,514	0/0:42,0:27:63.38:0,63,1070	0/0:45,0:36:94.60:0,95,1416	0/0:33,0:33:72.21:0,72,1192	0/0:26,0:26:69.22:0,69,1141	0/0:28,0:28:75.23:0,75,1232	0/0:45,0:44:99:0,111,1704	0/0:36,0:36:99:0,102,1706	0/0:36,0:36:90.77:0,91,1517	0/0:33,0:33:81.28:0,81,1375	0/0:28,0:28:78.24:0,78,1281	0/0:23,0:23:66.21:0,66,1086	0/0:31,0:31:81.25:0,81,1329	0/0:38,0:38:99:0,105,1764	0/0:22,0:22:54.18:0,54,926	1/1:4,15:18:39.13:512,39,0	1/1:3,19:22:51.17:670,51,0	0/0:26,0:24:63.17:0,63,1047	0/0:40,0:40:84.07:0,84,1350	0/0:21,0:21:39.13:0,39,669	0/0:27,0:27:69.22:0,69,1150	1/1:8,12:20:21.01:275,21,0	1/1:3,16:19:30.10:394,30,0	0/0:25,0:25:63.22:0,63,1080	0/0:35,0:35:93.32:0,93,1590	0/0:27,0:27:24.08:0,24,382	0/0:1,0:1:3.01:0,3,51
chr10	69686254	.	CA	C	379.03	PASS	AB=0.955;AC=3;AF=0.054;AN=56;BaseQRankSum=6.402;DP=617;FS=6.705;HRun=9;HaplotypeScore=60.2483;InbreedingCoeff=0.6463;MQ=78.09;MQ0=0;MQRankSum=0.521;QD=9.24;ReadPosRankSum=-3.625;VQSLOD=1.0438;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:51.15:0,51,588	0/0:5,0:5:15.04:0,15,173	0/1:20,1:19:6.52:7,0,161	0/0:14,0:13:24.27:0,24,225	0/0:26,1:27:67.09:0,67,801	0/0:29,0:29:72.05:0,72,811	0/0:29,0:29:75.22:0,75,866	1/1:1,18:20:53.06:473,53,0	0/0:20,0:20:50.97:0,51,558	0/0:36,0:36:82.48:0,82,930	0/0:34,0:36:95.94:0,96,1054	0/0:21,0:21:54.16:0,54,623	0/0:21,0:21:54.16:0,54,623	0/0:14,0:14:36.10:0,36,411	0/0:31,0:31:65.93:0,66,880	0/0:27,0:27:66.20:0,66,762	0/0:20,0:20:51.15:0,51,589	0/0:23,0:23:60.16:0,60,681	0/0:21,0:21:60.17:0,60,682	0/0:33,0:33:90.27:0,90,1039	0/0:9,0:9:21.06:0,21,242	0/0:19,0:19:45.13:0,45,519	0/0:26,0:26:72.20:0,72,822	0/0:11,0:11:27.08:0,27,306	0/0:15,1:16:14.66:0,15,423	0/0:26,0:26:72.21:0,72,831	0/0:36,2:38:53.36:0,53,1104	0/0:4,0:4:9.03:0,9,104
chr10	69687552	.	TCACACACACA	T	772.32	PASS	AB=0.909;AC=8;AF=0.154;AN=52;BaseQRankSum=2.237;DP=507;FS=1.881;HRun=0;HaplotypeScore=107.3203;InbreedingCoeff=0.4639;MQ=36.34;MQ0=53;MQRankSum=-4.363;QD=10.03;ReadPosRankSum=1.202;VQSLOD=1.9854;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:23:5.30:0,5,44	0/0:5,0:5:6.02:0,6,174	./.	./.	1/1:13,0:15:2.88:15,3,0	0/0:19,0:18:29.03:0,29,973	0/0:39,0:36:15.99:0,16,507	0/0:20,0:17:31.08:0,31,343	0/0:17,0:14:18.06:0,18,667	0/0:20,0:16:30.09:0,30,677	0/0:8,0:8:9.03:0,9,302	0/0:21,0:17:12.02:0,12,390	0/0:16,0:14:30.46:0,30,725	0/0:21,0:19:18.05:0,18,632	0/0:26,0:20:13.81:0,14,613	0/0:19,0:16:17.97:0,18,419	0/0:24,0:21:12.04:0,12,166	0/0:19,0:15:23.92:0,24,431	0/1:12,2:11:2.87:205,0,3	0/0:11,3:14:2.99:0,3,23	0/0:25,1:20:2.99:0,3,23	0/0:26,0:23:15.05:0,15,589	0/0:21,0:18:2.99:0,3,23	0/0:25,0:19:6.01:0,6,146	0/0:17,0:15:15.05:0,15,575	0/1:31,2:28:99:343,0,269	1/1:3,3:6:9.03:235,9,0	1/1:4,5:6:8.64:104,9,0
chr10	69687609	.	GAC	G	2695.24	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=7.202;DP=692;FS=13.429;HRun=0;HaplotypeScore=93.6591;InbreedingCoeff=0.9811;MQ=54.19;MQ0=31;MQRankSum=-0.531;QD=14.41;ReadPosRankSum=2.568;VQSLOD=2.9491;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:10,18:27:23.05:268,23,0	0/0:11,0:10:27.09:0,27,433	0/0:27,0:10:12.12:0,12,295	0/0:29,1:15:13.90:0,14,249	1/1:6,19:26:33.10:409,33,0	0/0:21,0:21:39.12:0,39,597	0/0:29,0:28:36.12:0,36,578	0/0:41,0:35:60.13:0,60,864	0/0:18,0:17:39.06:0,39,598	0/0:30,0:28:63.21:0,63,990	0/0:11,0:11:27.07:0,27,396	0/0:28,0:27:48.13:0,48,725	0/0:30,0:28:18.65:0,19,797	0/0:28,0:27:29.06:0,29,990	0/0:37,0:35:69.23:0,69,1119	0/0:23,0:21:50.91:0,51,790	0/0:21,0:19:42:0,42,577	0/0:18,0:16:30.45:0,30,398	1/1:4,10:12:13.23:264,13,0	1/1:6,10:14:17.80:223,18,0	1/1:10,26:35:33.10:409,33,0	0/0:22,0:21:45.15:0,45,721	0/0:27,0:25:33.04:0,33,415	0/0:27,0:26:32.92:0,33,477	0/0:24,0:21:39.11:0,39,578	1/1:12,25:35:60.19:737,60,0	1/1:3,15:18:33.02:405,33,0	1/1:4,8:10:15.05:186,15,0
chr10	69689057	.	G	GT	740.87	PASS	AB=0.929;AC=3;AF=0.054;AN=56;BaseQRankSum=-1.392;DP=604;FS=0.000;HRun=8;HaplotypeScore=72.7509;InbreedingCoeff=0.6201;MQ=75.88;MQ0=0;MQRankSum=-0.928;QD=15.43;ReadPosRankSum=-4.036;VQSLOD=2.8810;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:99:0,102,914	0/0:12,0:12:30.01:0,30,274	0/0:33,0:28:54.88:0,55,427	0/0:18,0:14:2.74:0,3,131	0/0:23,0:23:60.03:0,60,548	0/0:30,0:30:74.99:0,75,679	0/0:20,0:20:57.03:0,57,521	1/1:15,20:35:53.71:835,54,0	0/0:18,0:18:50.99:0,51,458	0/0:25,1:26:28.32:0,28,502	0/0:17,0:17:50.05:0,50,441	0/1:12,1:13:4.65:5,0,209	0/0:18,1:19:16.31:0,16,377	0/0:21,0:21:60:0,60,540	0/0:25,0:25:63:0,63,567	0/0:17,0:17:51.01:0,51,461	0/0:28,0:28:71.97:0,72,641	0/0:15,0:15:41.93:0,42,364	0/0:16,0:16:36.02:0,36,329	0/0:22,0:22:65.71:0,66,587	0/0:11,0:11:33.02:0,33,302	0/0:27,0:27:75.02:0,75,681	0/0:20,0:20:47.99:0,48,434	0/0:20,0:20:51:0,51,458	0/0:22,0:22:60.03:0,60,549	0/0:20,0:21:59.05:0,59,521	0/0:25,0:25:69:0,69,620	0/0:13,0:12:33.01:0,33,302
chr10	69689077	.	TA	T	2572.20	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=10.853;DP=600;FS=6.378;HRun=9;HaplotypeScore=65.2048;InbreedingCoeff=0.9266;MQ=74.52;MQ0=0;MQRankSum=-0.546;QD=18.64;ReadPosRankSum=-1.166;VQSLOD=3.4576;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:38,1:39:74.80:0,75,1093	0/0:10,0:10:30.08:0,30,338	0/1:23,0:22:0.47:0,0,222	0/0:12,0:11:9.46:0,9,106	0/0:22,0:22:57.17:0,57,658	0/0:27,0:27:78.22:0,78,892	0/0:20,0:20:51.11:0,51,573	1/1:6,24:30:66.01:604,66,0	0/0:15,0:15:45.12:0,45,511	0/0:28,0:28:63.19:0,63,726	0/0:21,0:21:60.18:0,60,692	0/0:11,0:11:33.10:0,33,381	0/0:17,0:17:42.11:0,42,475	0/0:24,0:24:72.20:0,72,822	0/0:22,0:22:60.18:0,60,692	0/0:24,0:24:66.17:0,66,744	1/1:1,23:24:66.03:604,66,0	1/1:0,17:17:51.03:467,51,0	0/0:15,0:15:30.09:0,30,346	0/0:25,0:25:72.21:0,72,831	0/0:12,0:12:33.10:0,33,380	0/0:33,0:33:90.25:0,90,1029	1/1:2,16:18:48.02:439,48,0	1/1:1,24:25:69.04:632,69,0	0/0:23,0:23:63.17:0,63,710	0/0:24,1:25:38.72:0,39,696	0/0:25,0:25:72.21:0,72,830	0/0:12,0:11:33.10:0,33,381
chr10	69690900	.	CT	C	5197.50	PASS	AC=16;AF=0.286;AN=56;BaseQRankSum=5.447;DP=548;FS=3.095;HRun=3;HaplotypeScore=68.0630;InbreedingCoeff=0.9982;MQ=82.25;MQ0=0;MQRankSum=-2.825;QD=29.36;ReadPosRankSum=1.925;VQSLOD=4.5523;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,33:37:76:1039,76,0	0/0:8,0:8:24.08:0,24,345	0/0:14,0:14:20.28:0,20,318	0/0:18,0:17:35.14:0,35,489	1/1:1,12:13:35.99:394,36,0	0/0:26,0:26:78.23:0,78,1083	0/0:19,0:19:54.15:0,54,723	0/0:29,0:29:31.75:0,32,212	0/0:18,0:18:51.62:0,52,698	0/0:25,0:25:72.20:0,72,965	0/0:21,0:21:54.67:0,55,771	0/0:21,0:21:58.04:0,58,781	0/0:18,0:18:49.03:0,49,659	0/0:13,0:13:33.09:0,33,439	0/0:18,0:18:50.59:0,51,731	0/0:15,0:15:41.47:0,41,492	0/0:26,0:26:73.73:0,74,459	0/0:13,0:13:35.02:0,35,218	1/1:1,12:13:36.10:432,36,0	1/1:2,23:25:57.04:653,57,0	1/1:2,15:17:36.11:445,36,0	0/0:10,0:10:24.08:0,24,345	0/0:23,0:23:65.13:0,65,423	0/0:13,0:13:29.47:0,29,183	0/0:23,0:23:63.12:0,63,837	1/1:1,33:34:50.10:1029,50,0	1/1:2,24:26:63.20:777,63,0	1/1:1,11:12:36.08:428,36,0
chr10	69690903	.	TAA	T	1946.30	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=0.033;DP=547;FS=2.940;HRun=10;HaplotypeScore=88.8010;InbreedingCoeff=0.9939;MQ=81.29;MQ0=0;MQRankSum=-2.108;QD=26.66;ReadPosRankSum=2.812;VQSLOD=3.9763;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:35,0:35:89.56:0,90,730	0/0:8,0:8:24.08:0,24,381	0/0:13,0:13:27.08:0,27,368	0/0:16,0:15:19.92:0,20,459	0/0:16,0:16:17.44:0,17,300	0/0:25,0:25:72.25:0,72,1142	0/0:18,0:18:51.17:0,51,808	0/0:9,0:31:51.04:0,51,174	0/0:18,0:18:48.06:0,48,730	0/0:27,0:27:78.26:0,78,1217	0/0:19,0:20:56.67:0,57,829	0/0:18,0:19:54.17:0,54,831	0/0:16,0:18:47.54:0,48,691	0/0:14,0:14:39.13:0,39,617	0/0:17,0:18:53.67:0,54,818	0/0:13,0:14:26.58:0,27,390	1/1:1,24:25:72.19:803,72,0	1/1:3,9:12:27.07:300,27,0	0/0:14,0:14:39.01:0,39,370	0/0:24,0:24:34.49:0,34,492	0/0:18,0:17:41.94:0,42,380	0/0:10,0:10:30.10:0,30,465	1/1:1,21:22:63.17:702,63,0	1/1:1,13:14:27.07:301,27,0	0/0:21,0:22:56.67:0,57,842	0/0:38,0:38:99:0,101,945	0/0:26,0:26:68.77:0,69,575	0/0:12,0:12:35.83:0,36,267
chr10	69691252	.	T	TA	1560.75	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=-9.817;DP=605;FS=3.854;HRun=10;HaplotypeScore=64.5737;InbreedingCoeff=0.9757;MQ=76.48;MQ0=0;MQRankSum=0.215;QD=18.36;ReadPosRankSum=1.172;VQSLOD=4.5795;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:47.84:0,48,390	0/0:6,0:6:17.98:0,18,148	0/0:16,0:16:28.51:0,29,213	0/0:17,0:16:25.19:0,25,180	0/0:27,0:28:61.91:0,62,496	0/0:26,0:27:70.93:0,71,572	0/0:25,0:25:64.95:0,65,523	0/0:30,0:31:79.94:0,80,646	0/0:20,0:20:50.92:0,51,419	0/0:27,0:27:68.89:0,69,565	0/0:21,0:21:53.89:0,54,441	0/0:18,0:18:19.93:0,20,316	0/0:17,2:19:21.95:0,22,387	0/0:16,1:18:16.83:0,17,277	0/0:29,0:29:74.91:0,75,616	0/0:15,0:15:35.95:0,36,296	1/1:7,23:30:44.53:679,45,0	1/1:5,15:20:11.19:326,11,0	0/0:24,0:24:64.90:0,65,513	0/0:27,1:30:38.92:0,39,516	0/0:15,0:16:41.94:0,42,345	0/0:16,0:19:51.05:0,51,385	1/1:5,14:19:14.45:359,14,0	1/1:3,13:16:33.08:352,33,0	0/0:22,2:24:30.94:0,31,461	0/0:23,0:23:59.92:0,60,493	0/0:29,0:29:65.80:0,66,532	0/0:13,0:13:26.96:0,27,222
chr10	69691626	.	CG	C	3617.73	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=9.936;DP=577;FS=1.353;HRun=2;HaplotypeScore=55.4259;InbreedingCoeff=0.9972;MQ=91.63;MQ0=0;MQRankSum=-2.930;QD=36.54;ReadPosRankSum=-0.374;VQSLOD=3.8839;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,129,1882	0/0:7,0:7:21.07:0,21,314	0/0:22,0:22:54.18:0,54,793	0/0:26,0:26:70.10:0,70,1032	0/0:28,0:28:75.25:0,75,1123	0/0:23,0:23:63.21:0,63,943	0/0:26,0:26:78.22:0,78,1133	0/0:32,0:32:90.30:0,90,1346	0/0:10,0:10:30.10:0,30,449	0/0:22,0:22:63.21:0,63,939	0/0:21,0:21:63.21:0,63,943	0/0:26,0:26:72.24:0,72,1070	0/0:9,0:9:27.09:0,27,398	0/0:24,0:24:72.18:0,72,1002	0/0:23,0:23:69.23:0,69,1034	0/0:15,0:15:45.15:0,45,672	0/0:28,0:28:84.20:0,84,1208	0/0:14,0:14:39.13:0,39,581	1/1:0,17:17:51.17:659,51,0	1/1:0,23:23:66.21:857,66,0	1/1:0,16:16:42.14:545,42,0	0/0:22,0:22:66.22:0,66,988	0/0:23,0:23:69.23:0,69,1032	0/0:19,0:19:57.17:0,57,814	0/0:14,0:14:39.13:0,39,582	1/1:0,12:12:36.12:467,36,0	1/1:0,23:23:66.21:856,66,0	1/1:0,8:8:18.06:234,18,0
chr10	69692999	.	T	TG	12979.89	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-15.493;DP=715;FS=6.704;HRun=1;HaplotypeScore=66.7006;InbreedingCoeff=0.9994;MQ=68.71;MQ0=0;MQRankSum=-2.911;QD=40.69;ReadPosRankSum=2.018;VQSLOD=5.4552;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:1,30:31:81.23:1188,81,0	0/0:13,0:13:39.10:0,39,489	0/0:29,0:29:80.66:0,81,972	0/0:26,0:26:65.36:0,65,828	1/1:0,27:27:78.26:1156,78,0	0/0:24,0:24:72.22:0,72,909	0/0:25,0:25:72.23:0,72,920	1/1:0,25:25:75.23:1082,75,0	0/0:22,0:22:66.20:0,66,843	0/0:43,0:43:99:0,126,1636	0/0:25,0:25:75.24:0,75,962	0/0:19,0:19:57.19:0,57,740	0/0:31,0:31:90.28:0,90,1154	0/0:29,0:29:84.24:0,84,1061	0/0:30,0:30:84.27:0,84,1090	0/0:27,0:27:81.25:0,81,1037	1/1:2,23:25:57.19:851,57,0	1/1:1,26:27:72.24:1078,72,0	1/1:1,12:13:36.11:520,36,0	1/1:2,29:30:86.94:1243,87,0	1/1:1,23:24:60.20:899,60,0	0/0:27,0:27:78.21:0,78,993	1/1:0,18:18:54.18:809,54,0	1/1:0,33:33:96.33:1438,96,0	0/0:25,0:25:72.21:0,72,917	1/1:1,26:28:81.23:1145,81,0	1/1:1,29:30:84.28:1256,84,0	1/1:0,7:7:21.07:315,21,0
chr10	69694317	.	TTC	T	899.88	PASS	AB=1.000;AC=10;AF=0.179;AN=56;BaseQRankSum=8.882;DP=419;FS=12.159;HRun=0;HaplotypeScore=81.3834;InbreedingCoeff=0.7813;MQ=57.05;MQ0=8;MQRankSum=-8.853;QD=9.57;ReadPosRankSum=2.230;VQSLOD=2.5772;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/1:34,0:34:30.47:30,0,63	0/0:9,0:9:24.08:0,24,445	0/0:12,0:8:20.06:0,20,242	0/0:11,0:8:21.06:0,21,301	0/0:19,0:19:19.55:0,20,191	0/0:21,0:21:60.20:0,60,1046	0/0:12,0:12:36.05:0,36,583	0/0:27,0:26:46.58:0,47,445	0/0:15,0:15:36.12:0,36,680	0/0:16,0:14:39.12:0,39,646	0/0:16,0:16:42.13:0,42,745	0/0:15,0:15:33.08:0,33,484	0/0:21,0:21:42.60:0,43,690	0/0:16,0:16:36.12:0,36,662	0/0:13,0:13:33.10:0,33,546	0/0:13,0:13:36.12:0,36,639	1/1:6,10:14:23.65:263,24,0	1/1:7,9:14:27.45:325,27,0	0/0:12,0:12:20.39:0,20,240	0/0:15,0:15:17.11:0,17,285	0/0:8,0:7:17.49:0,17,121	0/0:11,0:11:30.10:0,30,536	1/1:4,5:9:21.92:237,22,0	1/1:1,8:8:18.05:206,18,0	0/0:15,0:15:39.05:0,39,680	0/0:14,0:13:19.51:0,20,184	0/0:14,0:14:11.74:0,12,255	0/1:8,0:7:1.26:1,0,35
chr10	69694319	.	CTTTCTTTCTTTT	C	2355.51	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=2.385;DP=422;FS=4.556;HRun=0;HaplotypeScore=146.8328;InbreedingCoeff=0.1853;MQ=54.71;MQ0=9;MQRankSum=0.226;QD=16.13;ReadPosRankSum=-1.616;VQSLOD=2.0779;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:3,30:34:42.14:1520,42,0	0/0:9,0:9:24.08:0,24,1206	0/0:11,0:7:4.86:0,5,185	0/0:10,0:7:3.01:0,3,355	1/1:4,15:19:23.97:456,24,0	0/0:22,0:22:60.16:0,60,2520	0/0:13,0:13:33.05:0,33,1342	0/0:26,0:25:50:0,50,775	0/0:15,0:15:42.02:0,42,1525	0/0:16,0:14:30.09:0,30,881	0/0:15,0:15:39.13:0,39,1299	0/0:16,0:16:26.44:0,26,731	0/0:20,0:20:36.93:0,37,1260	0/0:17,0:17:45.53:0,46,1653	0/0:10,0:10:24.06:0,24,838	0/0:14,0:14:39.08:0,39,1541	0/1:18,0:14:9.88:10,0,118	0/0:17,0:14:22.94:0,23,285	0/1:11,0:11:29.18:29,0,364	0/1:17,0:17:99:165,0,386	0/1:10,0:9:38.14:43,0,38	0/0:11,0:11:30:0,30,1008	0/1:8,0:8:6.56:7,0,61	0/0:10,0:9:13.35:0,13,85	0/0:16,0:16:39.08:0,39,1695	0/1:15,0:14:99:115,0,237	0/1:14,0:14:99:168,0,298	0/0:8,0:7:17.94:0,18,202
chr10	69694322	.	TCTTTC	T	3174.73	PASS	AB=0.814;AC=22;AF=0.393;AN=56;BaseQRankSum=8.219;DP=400;FS=22.677;HRun=0;HaplotypeScore=89.5970;InbreedingCoeff=0.6601;MQ=47.78;MQ0=10;MQRankSum=-4.679;QD=15.95;ReadPosRankSum=-3.375;VQSLOD=0.8848;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:32,0:32:42.61:728,43,0	0/0:9,0:9:24.97:0,25,601	0/0:8,0:4:4.67:0,5,73	0/0:8,0:6:2.97:0,3,215	1/1:15,0:15:23.97:283,24,0	0/0:21,0:21:59.57:0,60,1205	0/0:14,0:14:33.57:0,34,702	0/1:22,0:22:43.09:145,0,43	0/0:17,0:17:28.46:0,28,769	0/0:12,0:10:30.09:0,30,611	0/0:15,0:15:39.11:0,39,691	0/0:14,0:14:26.35:0,26,377	0/0:17,0:17:33.41:0,33,638	0/0:17,0:17:9.98:0,10,686	0/0:8,0:8:24.06:0,24,484	0/0:14,0:14:36.02:0,36,785	1/1:19,0:15:26.25:282,26,0	1/1:19,0:15:37.15:311,37,0	0/1:9,0:12:1.79:109,0,2	0/1:15,0:16:5.46:312,0,5	1/1:9,0:8:14.60:186,15,0	0/0:11,0:11:30:0,30,534	1/1:7,1:8:18.16:244,18,0	1/1:9,1:9:18.03:195,18,0	0/0:15,0:15:38.96:0,39,872	0/1:3,12:13:58.34:185,0,58	1/1:14,0:14:1.34:301,1,0	1/1:6,0:6:15.96:97,16,0
chr10	69694323	.	CTTTCT	C	2092.14	PASS	AB=1.000;AC=20;AF=0.357;AN=56;BaseQRankSum=8.857;DP=412;FS=8.257;HRun=0;HaplotypeScore=95.9170;InbreedingCoeff=0.6388;MQ=46.78;MQ0=12;MQRankSum=-3.634;QD=10.62;ReadPosRankSum=0.329;VQSLOD=1.9420;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:32,0:32:45.02:490,45,0	0/0:9,0:9:7.93:0,8,547	0/0:8,0:4:5.97:0,6,49	0/0:8,0:5:5.99:0,6,125	1/1:15,0:15:14.80:126,15,0	0/0:21,0:21:59.96:0,60,1124	0/0:14,0:14:33.02:0,33,649	1/1:7,15:21:39.75:419,40,0	0/0:17,0:17:26.14:0,26,609	0/0:12,0:10:26.96:0,27,437	0/0:15,0:15:38.07:0,38,505	0/0:14,0:14:15.05:0,15,264	0/0:18,0:18:36.46:0,36,622	0/0:18,0:18:41.64:0,42,681	0/0:8,0:8:21.02:0,21,362	0/0:14,0:14:33.07:0,33,668	1/1:17,5:17:9.31:235,9,0	1/1:14,5:15:18.37:263,18,0	0/1:13,0:13:4.82:5,0,163	0/1:16,0:16:86.81:87,0,126	1/1:9,0:8:10.07:69,10,0	0/0:12,0:12:25.27:0,25,416	1/1:5,3:8:16.52:232,17,0	1/1:8,3:11:23.85:278,24,0	0/0:16,0:15:35.33:0,35,789	0/1:15,0:13:37.19:37,0,86	0/1:14,0:14:52.63:53,0,104	0/0:10,0:9:12.86:0,13,74
chr10	69695646	.	CAA	C	6485.06	PASS	AB=0.874;AC=16;AF=0.286;AN=56;BaseQRankSum=6.748;DP=720;FS=10.641;HRun=5;HaplotypeScore=113.4886;InbreedingCoeff=0.6473;MQ=64.07;MQ0=11;MQRankSum=1.146;QD=24.56;ReadPosRankSum=-0.719;VQSLOD=2.5476;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:29:45.88:46,0,125	0/0:8,0:8:24.08:0,24,420	0/0:25,0:22:50.15:0,50,740	0/0:19,0:15:42.11:0,42,670	0/1:30,0:29:99:119,0,160	0/0:23,0:23:66.22:0,66,1130	0/0:24,0:24:72.19:0,72,1195	1/1:1,23:23:69.17:889,69,0	0/0:22,0:22:66.20:0,66,1116	0/0:24,0:24:69.20:0,69,1221	0/0:29,0:29:84.27:0,84,1455	0/0:33,0:33:96.33:0,96,1735	0/0:31,0:31:90.28:0,90,1579	0/0:24,0:24:69.24:0,69,1254	0/0:20,0:19:60.19:0,60,1060	0/0:22,0:22:60.21:0,60,1069	0/0:37,0:37:77.68:0,78,417	0/0:25,0:25:52.82:0,53,308	1/1:1,14:14:39.13:545,39,0	1/1:4,31:35:87.29:1206,87,0	0/1:2,14:13:5.73:387,0,6	0/0:28,0:28:81.28:0,81,1442	0/1:24,1:23:25.99:26,0,197	0/0:27,0:26:3.31:0,3,236	0/0:35,0:35:99:0,102,1807	1/1:2,27:29:81.27:1128,81,0	1/1:3,36:39:99:1427,102,0	1/1:1,20:20:51.17:712,51,0
chr10	69695648	.	A	AACAAAC	5689.62	PASS	AB=0.980;AC=17;AF=0.304;AN=56;BaseQRankSum=4.407;DP=726;FS=2.323;HRun=0;HaplotypeScore=169.1892;InbreedingCoeff=0.5767;MQ=64.10;MQ0=11;MQRankSum=-1.361;QD=19.03;ReadPosRankSum=-1.100;VQSLOD=4.3339;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:3,25:34:44.18:1420,44,0	0/0:8,0:8:24.08:0,24,529	0/0:25,0:22:49.07:0,49,810	0/0:19,0:15:42.11:0,42,789	1/1:0,28:31:66.22:2099,66,0	0/0:22,0:22:66.22:0,66,1371	0/0:24,0:24:66.64:0,67,1467	0/1:23,0:23:99:307,0,317	0/0:23,0:23:66.20:0,66,1395	0/0:24,0:24:72.21:0,72,1617	0/0:28,0:28:84.27:0,84,1883	0/0:33,0:33:96.33:0,96,2153	0/0:30,0:30:90.28:0,90,1964	0/0:25,0:25:72.23:0,72,1661	0/0:20,0:19:60.19:0,60,1277	0/0:23,0:23:63.20:0,63,1289	1/1:1,0:38:68.81:360,69,0	1/1:3,0:27:21.70:181,22,0	0/1:14,0:13:99:150,0,192	0/1:33,0:33:81.48:81,0,752	0/1:15,0:13:99:159,0,149	0/0:28,0:28:81.28:0,81,1790	1/1:2,0:23:48.21:297,48,0	1/1:1,0:25:54.05:387,54,0	0/0:36,0:36:99:0,105,2305	0/1:29,0:29:99:247,0,508	0/0:38,0:38:43.19:0,43,1019	0/0:20,0:20:51.15:0,51,598
chr10	69695956	.	GAGAGAGAGAGAGAGAGAGAGAGAGAA	G	826.26	PASS	AB=1.000;AC=14;AF=0.250;AN=56;BaseQRankSum=3.386;DP=476;FS=8.676;HRun=0;HaplotypeScore=228.2891;InbreedingCoeff=0.0505;MQ=48.04;MQ0=31;MQRankSum=-2.117;QD=4.26;ReadPosRankSum=-4.541;VQSLOD=0.6115;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:29,0:26:44.77:45,0,1038	0/0:7,0:6:14.29:0,14,460	0/0:13,0:8:12.03:0,12,155	0/0:22,0:5:9.02:0,9,116	0/0:17,0:17:15.02:0,15,504	0/0:27,0:25:49.76:0,50,1637	0/0:21,0:19:47.25:0,47,1308	0/1:7,0:6:52.84:53,0,53	0/0:19,0:18:42.94:0,43,1391	0/0:25,0:25:64.99:0,65,1850	0/0:16,0:16:38.89:0,39,893	0/0:11,0:9:14.85:0,15,931	0/0:16,0:15:24.06:0,24,753	0/0:10,0:9:17.99:0,18,435	0/0:25,0:24:46.66:0,47,1208	0/0:11,0:10:23.96:0,24,688	0/1:24,0:22:1.53:156,0,2	0/1:15,0:15:19.36:153,0,19	0/1:10,0:9:15.65:16,0,105	0/1:17,0:16:11.97:12,0,33	0/1:12,0:9:15.93:16,0,100	0/0:20,0:20:30.82:0,31,1091	1/1:12,0:12:23.56:198,24,0	1/1:12,14:25:3.01:100,3,0	0/0:22,0:19:24.81:0,25,679	0/1:14,0:14:99:142,0,150	0/1:20,0:20:62.67:63,0,173	0/1:8,0:7:34.96:35,0,88
chr10	69695980	.	GAA	G	3194.98	PASS	AB=1.000;AC=25;AF=0.463;AN=54;BaseQRankSum=4.588;DP=533;FS=2.385;HRun=3;HaplotypeScore=84.1941;InbreedingCoeff=0.9105;MQ=66.46;MQ0=18;MQRankSum=-0.669;QD=15.00;ReadPosRankSum=1.326;VQSLOD=0.8649;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:20,0:18:41.84:328,42,0	0/0:12,0:11:30.25:0,30,250	0/0:29,0:16:41.96:0,42,415	0/0:46,0:23:16.71:0,17,436	1/1:0,17:17:2.94:18,3,0	0/0:22,0:20:39.31:0,39,347	0/0:25,0:24:65.50:0,66,565	1/1:25,0:23:68.51:585,69,0	0/0:16,0:15:35.42:0,35,289	0/0:28,0:28:68.87:0,69,633	0/0:22,0:22:59.81:0,60,520	0/0:12,0:11:5.02:0,5,164	0/0:15,0:15:41.87:0,42,363	0/0:9,0:9:22.41:0,22,171	0/0:25,0:24:63.93:0,64,528	0/1:10,0:10:0.14:0,0,169	1/1:22,0:20:47.19:362,47,0	1/1:11,0:11:29.77:219,30,0	1/1:3,4:7:21:184,21,0	1/1:3,19:21:11.75:76,12,0	1/1:14,0:12:17.98:150,18,0	0/0:20,0:20:40.37:0,40,323	1/1:20,0:20:47.92:393,48,0	./.	0/0:24,0:24:49.12:0,49,427	1/1:17,0:17:50.97:456,51,0	1/1:15,0:15:41.78:330,42,0	1/1:13,0:13:38.88:308,39,0
chr10	69696114	.	T	TA	5366.06	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=15.136;DP=602;FS=1.192;HRun=1;HaplotypeScore=71.7718;InbreedingCoeff=0.9999;MQ=82.51;MQ0=0;MQRankSum=-1.810;QD=34.84;ReadPosRankSum=2.652;VQSLOD=4.9674;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,29:29:81.26:1123,81,0	0/0:10,0:10:30.06:0,30,371	0/0:20,0:20:56.53:0,57,594	0/0:15,0:15:41.83:0,42,467	1/1:4,22:25:59.70:844,60,0	0/0:24,0:24:72.23:0,72,933	0/0:23,0:23:69.19:0,69,861	0/0:19,0:19:54.18:0,54,701	0/0:22,0:22:63.20:0,63,818	0/0:26,0:26:75.22:0,75,932	0/0:16,0:16:45.14:0,45,572	0/0:20,0:20:54.17:0,54,688	0/0:27,0:27:81.25:0,81,1036	0/0:26,0:26:78.25:0,78,1012	0/0:30,0:30:90.29:0,90,1168	0/0:20,0:20:60.18:0,60,764	1/1:1,21:21:48.13:670,48,0	1/1:2,18:20:48.16:671,48,0	0/0:18,0:18:54.16:0,54,676	0/0:20,0:20:57.06:0,57,699	0/0:31,0:31:93.30:0,93,1207	0/0:16,0:16:45.13:0,45,570	1/1:1,18:19:46.40:631,46,0	1/1:0,38:38:99:1427,102,0	0/0:16,0:16:45.15:0,45,584	0/0:17,0:17:48.16:0,48,623	0/0:19,0:19:57.16:0,57,712	0/0:13,0:13:39.11:0,39,491
chr10	69696242	.	A	ACC	514.02	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-3.960;DP=693;FS=9.352;HRun=7;HaplotypeScore=95.2278;InbreedingCoeff=0.9030;MQ=83.38;MQ0=0;MQRankSum=0.015;QD=27.05;ReadPosRankSum=-4.438;VQSLOD=1.6690;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:69.20:0,69,804	0/0:9,0:9:24.07:0,24,280	0/0:24,0:24:38.15:0,38,461	0/0:26,0:25:39.83:0,40,525	0/0:24,0:24:63.17:0,63,723	0/0:27,0:27:75.20:0,75,863	0/0:34,0:34:90.20:0,90,1023	1/1:3,14:19:39.12:609,39,0	0/0:27,0:27:78.21:0,78,898	0/0:23,0:23:66.19:0,66,769	0/0:23,0:23:63.17:0,63,723	0/0:21,0:21:60.18:0,60,699	0/0:22,0:22:63.16:0,63,723	0/0:37,0:37:99:0,105,1186	0/0:33,0:33:93.26:0,93,1073	0/0:22,0:22:66.18:0,66,759	0/0:46,0:46:99:0,126,1456	0/0:17,0:17:48.14:0,48,559	0/0:19,0:19:42.10:0,42,489	0/0:16,0:16:45.13:0,45,523	0/0:55,0:55:99:0,129,1502	0/0:23,0:23:54.14:0,54,629	0/0:22,0:22:57.15:0,57,663	0/0:35,0:35:96.23:0,96,1102	0/0:15,0:15:36.10:0,36,419	0/0:23,0:23:54.13:0,54,629	0/0:17,0:17:42.11:0,42,489	0/0:6,0:6:6:0,6,70
chr10	69697385	.	AC	A	1136.97	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.594;DP=737;FS=0.641;HRun=2;HaplotypeScore=69.2525;InbreedingCoeff=0.9979;MQ=83.27;MQ0=0;MQRankSum=-1.370;QD=34.45;ReadPosRankSum=-4.545;VQSLOD=2.1043;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:48,0:48:99:0,141,2035	0/0:18,0:18:54.16:0,54,768	0/0:29,0:29:87.21:0,87,1237	0/0:24,0:24:24.03:0,24,856	0/0:28,0:28:81.27:0,81,1212	0/0:30,0:30:87.28:0,87,1279	0/0:21,0:21:63.16:0,63,881	1/1:0,33:33:99:1232,99,0	0/0:21,0:21:63.17:0,63,914	0/0:28,0:28:84.24:0,84,1216	0/0:15,0:15:45.13:0,45,634	0/0:25,0:25:72.24:0,72,1075	0/0:34,0:34:99:0,99,1454	0/0:23,0:23:68.02:0,68,970	0/0:22,0:22:66.21:0,66,970	0/0:24,0:24:72.22:0,72,1040	0/0:23,0:23:69.21:0,69,1012	0/0:27,0:27:81.26:0,81,1189	0/0:24,0:24:66.20:0,66,926	0/0:37,0:37:99:0,111,1638	0/0:35,0:35:99:0,102,1476	0/0:30,0:30:90.05:0,90,1267	0/0:27,0:26:81.23:0,81,1169	0/0:17,0:17:51.17:0,51,762	0/0:26,0:26:78.23:0,78,1126	0/0:21,0:21:63.21:0,63,942	0/0:33,0:33:99:0,99,1471	0/0:14,0:14:39.13:0,39,584
chr10	69697780	.	TA	T	4312.52	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=14.312;DP=718;FS=0.000;HRun=7;HaplotypeScore=73.2997;InbreedingCoeff=0.9987;MQ=84.98;MQ0=0;MQRankSum=-1.953;QD=27.29;ReadPosRankSum=1.120;VQSLOD=5.4543;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:34,0:34:96.31:0,96,1206	0/0:9,0:9:24.08:0,24,302	0/0:26,0:26:40.51:0,41,719	0/0:17,0:17:45.04:0,45,507	0/0:40,0:40:99:0,117,1457	0/0:24,0:24:66.20:0,66,817	0/0:24,0:24:63.18:0,63,767	0/0:34,0:34:90.29:0,90,1132	0/0:33,0:33:96.31:0,96,1207	0/0:29,0:29:84.25:0,84,1035	0/0:21,0:21:60.18:0,60,742	0/0:25,0:25:72.22:0,72,895	0/0:23,0:23:63.20:0,63,793	0/0:26,0:26:72.23:0,72,902	0/0:26,0:26:75.23:0,75,930	0/0:23,0:23:63.19:0,63,780	0/0:28,0:28:81.26:0,81,1019	0/0:16,0:16:48.15:0,48,604	1/1:4,22:26:66.14:673,66,0	1/1:3,33:36:93.08:925,93,0	1/1:0,27:27:72.16:735,72,0	0/0:32,0:32:96.28:0,96,1183	0/0:25,0:25:66.21:0,66,830	0/0:22,0:22:63.19:0,63,780	0/0:23,0:23:69.22:0,69,868	1/1:1,34:35:99:1032,102,0	1/1:3,24:27:72.16:735,72,0	1/1:0,7:7:21.05:214,21,0
chr10	69700648	.	A	AACAC	8586.73	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=-12.267;DP=788;FS=2.665;HRun=0;HaplotypeScore=115.7504;InbreedingCoeff=0.9934;MQ=58.34;MQ0=20;MQRankSum=-1.366;QD=37.50;ReadPosRankSum=0.357;VQSLOD=5.0938;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:22:48.13:0,48,767	0/0:8,0:7:21.07:0,21,356	0/0:23,0:20:36.33:0,36,724	0/0:21,0:19:30.56:0,31,501	0/0:39,0:38:87.26:0,87,1399	0/0:22,0:22:54.18:0,54,892	0/0:29,0:28:75.24:0,75,1247	1/1:24,16:37:38.91:812,39,0	0/0:32,0:31:78.23:0,78,1246	0/0:34,0:33:81.28:0,81,1374	0/0:18,0:18:33.10:0,33,534	0/0:37,0:35:78.16:0,78,1321	0/0:26,0:26:60.20:0,60,1017	0/0:27,0:26:69.24:0,69,1167	0/0:28,0:24:57.18:0,57,924	0/0:29,0:26:66.23:0,66,1120	0/0:23,0:23:51.10:0,51,784	0/0:31,0:28:48.13:0,48,784	1/1:12,9:18:29.89:687,30,0	1/1:12,34:44:81.28:2012,81,0	1/1:5,32:39:81.28:1980,81,0	0/0:21,0:21:54.18:0,54,916	0/0:38,0:37:71.33:0,71,1518	0/0:23,0:23:54.18:0,54,916	0/0:23,0:21:57.19:0,57,944	1/1:12,20:32:65.99:1533,66,0	1/1:18,19:34:56.76:1263,57,0	1/1:1,4:5:12.04:300,12,0
chr10	69701580	.	CT	C	892.33	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=8.055;DP=777;FS=0.000;HRun=2;HaplotypeScore=87.1581;InbreedingCoeff=0.9997;MQ=88.18;MQ0=0;MQRankSum=-6.789;QD=30.77;ReadPosRankSum=-0.897;VQSLOD=2.9912;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:43:99:0,132,1930	0/0:11,0:11:33.10:0,33,475	0/0:33,1:33:96.31:0,96,1398	0/0:31,0:31:78.61:0,79,1089	0/0:17,0:17:51.17:0,51,763	0/0:26,0:26:78.26:0,78,1148	0/0:13,0:13:39.13:0,39,585	1/1:1,28:28:81.25:987,81,0	0/0:30,0:30:87.28:0,87,1277	0/0:21,0:21:60.19:0,60,880	0/0:19,0:19:54.18:0,54,807	0/0:29,0:29:87.29:0,87,1304	0/0:31,0:31:90.30:0,90,1347	0/0:31,0:31:93.30:0,93,1371	0/0:34,0:34:99:0,102,1529	0/0:29,0:29:87.29:0,87,1304	0/0:32,0:32:96.33:0,96,1439	0/0:22,0:22:63.21:0,63,944	0/0:30,0:30:90.29:0,90,1312	0/0:32,0:32:93.28:0,93,1334	0/0:36,0:36:99:0,108,1617	0/0:26,0:26:75.23:0,75,1084	0/0:20,0:20:57.19:0,57,850	0/0:39,0:39:99:0,114,1687	0/0:26,0:26:75.25:0,75,1104	0/0:33,0:33:96.30:0,96,1401	0/0:30,0:30:90.30:0,90,1346	0/0:22,0:22:63.17:0,63,901
chr10	69701585	.	CTTGTCTTGACAT	C	2159.98	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=7.443;DP=763;FS=0.000;HRun=0;HaplotypeScore=258.8492;InbreedingCoeff=0.9997;MQ=90.00;MQ0=0;MQRankSum=-7.559;QD=86.40;ReadPosRankSum=0.031;VQSLOD=2.5166;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:43:99:0,126,5867	0/0:11,0:11:33.11:0,33,1943	0/0:35,0:34:96.33:0,96,3994	0/0:33,0:33:90.72:0,91,3735	0/0:17,0:17:48.13:0,48,2202	0/0:25,0:25:75.24:0,75,3932	0/0:14,0:14:42.14:0,42,2062	1/1:5,20:24:60.20:2255,60,0	0/0:30,0:30:90.31:0,90,5197	0/0:18,0:18:51.17:0,51,2638	0/0:19,0:19:54.16:0,54,2503	0/0:32,0:32:96.33:0,96,5324	0/0:33,0:33:93.32:0,93,5130	0/0:30,0:30:90.31:0,90,4968	0/0:36,0:36:99:0,108,6191	0/0:30,0:30:90.29:0,90,4775	0/0:31,0:31:93.32:0,93,5510	0/0:19,0:19:54.19:0,54,3128	0/0:29,0:29:84.28:0,84,4463	0/0:30,0:30:87.24:0,87,3655	0/0:40,0:40:99:0,117,5788	0/0:26,0:26:72.22:0,72,3047	0/0:19,0:19:54.16:0,54,2807	0/0:32,0:32:96.32:0,96,5590	0/0:24,0:24:72.21:0,72,3115	0/0:30,0:30:87.28:0,87,4584	0/0:32,0:32:96.33:0,96,5341	0/0:19,0:19:57.20:0,57,3472
chr10	69703382	.	A	ATT	7410.01	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-15.381;DP=656;FS=0.723;HRun=3;HaplotypeScore=80.2914;InbreedingCoeff=0.9784;MQ=87.63;MQ0=1;MQRankSum=-3.100;QD=48.43;ReadPosRankSum=0.218;VQSLOD=4.0633;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:72.21:0,72,987	0/0:9,0:9:24.08:0,24,336	0/0:21,0:21:60.18:0,60,806	0/0:24,0:24:63.17:0,63,841	0/0:28,0:28:81.27:0,81,1134	0/0:33,0:33:93.30:0,93,1285	0/0:16,0:16:48.15:0,48,654	0/0:33,0:33:93.30:0,93,1286	0/0:25,0:25:72.24:0,72,1008	0/0:38,0:38:99:0,114,1583	0/0:28,0:28:81.27:0,81,1133	0/0:19,0:19:51.17:0,51,714	0/0:29,0:29:87.29:0,87,1218	0/0:19,0:19:57.18:0,57,781	0/0:22,0:22:63.21:0,63,881	0/0:18,0:18:54.18:0,54,755	0/0:18,0:18:54.18:0,54,756	0/0:15,0:15:42.14:0,42,588	1/1:0,25:26:78.26:1382,78,0	1/1:3,33:36:99:1786,99,0	1/1:0,12:13:27.09:495,27,0	0/0:20,0:20:57.19:0,57,798	0/0:32,0:32:93.30:0,93,1278	0/0:9,0:9:27.09:0,27,378	0/0:21,0:21:63.21:0,63,882	1/1:5,28:33:6.30:1446,6,0	1/1:1,36:36:99:1861,102,0	1/1:0,8:8:24.08:440,24,0
chr10	69703432	.	AT	A	1507.25	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.652;DP=634;FS=10.255;HRun=4;HaplotypeScore=81.1307;InbreedingCoeff=0.9957;MQ=80.21;MQ0=0;MQRankSum=-3.327;QD=28.99;ReadPosRankSum=1.660;VQSLOD=3.1393;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,19:19:51.11:595,51,0	0/0:8,0:8:24.08:0,24,336	0/0:16,0:16:29.87:0,30,519	0/0:17,0:17:38.05:0,38,471	1/1:2,31:33:87.26:1033,87,0	0/0:37,0:37:99:0,111,1553	0/0:11,0:11:33.11:0,33,462	0/0:34,0:34:90.30:0,90,1246	0/0:29,0:29:81.26:0,81,1117	0/0:41,0:41:99:0,123,1677	0/0:26,0:26:78.26:0,78,1089	0/0:20,0:20:60.20:0,60,839	0/0:26,0:26:78.25:0,78,1075	0/0:14,0:14:33.11:0,33,462	0/0:16,0:16:45.14:0,45,615	0/0:23,0:23:69.22:0,69,952	0/0:21,0:21:63.17:0,63,846	0/0:16,0:16:48.15:0,48,651	0/0:22,0:22:66.22:0,66,919	0/0:34,0:34:96.31:0,96,1329	0/0:10,0:10:27.09:0,27,375	0/0:21,0:21:63.20:0,63,858	0/0:25,0:25:66.21:0,66,908	0/0:13,0:13:36.12:0,36,501	0/0:28,0:28:81.25:0,81,1114	0/0:36,0:36:99:0,108,1495	0/0:31,0:30:87.24:0,87,1147	0/0:7,0:7:21.07:0,21,294
chr10	69703489	.	GGAA	G	2001.54	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=9.260;DP=666;FS=0.000;HRun=0;HaplotypeScore=95.8179;InbreedingCoeff=0.9993;MQ=83.13;MQ0=0;MQRankSum=-6.158;QD=35.74;ReadPosRankSum=1.820;VQSLOD=4.3187;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,25:26:72.25:1140,72,0	0/0:12,0:12:36.12:0,36,787	0/0:30,0:30:72.09:0,72,1412	0/0:11,0:11:27.06:0,27,539	1/1:6,24:30:63.21:984,63,0	0/0:35,0:35:96.33:0,96,2080	0/0:17,0:17:48.16:0,48,1032	0/0:32,0:32:81.27:0,81,1713	0/0:27,0:27:75.26:0,75,1623	0/0:31,0:31:87.30:0,87,1899	0/0:29,0:29:84.29:0,84,1803	0/0:24,0:24:69.22:0,69,1455	0/0:24,0:24:72.25:0,72,1536	0/0:19,0:19:54.15:0,54,1112	0/0:19,0:19:57.18:0,57,1187	0/0:31,0:31:84.29:0,84,1836	0/0:22,0:22:60.16:0,60,1209	0/0:17,0:17:45.10:0,45,909	0/0:21,0:21:54.18:0,54,1129	0/0:33,0:33:96.29:0,96,1975	0/0:17,0:17:48.15:0,48,990	0/0:19,0:19:54.19:0,54,1161	0/0:23,0:23:57.16:0,57,1147	0/0:22,0:22:63.22:0,63,1350	0/0:28,0:28:75.24:0,75,1597	0/0:31,0:31:78.27:0,78,1705	0/0:25,0:24:69.24:0,69,1505	0/0:11,0:11:33.11:0,33,722
chr10	69703740	.	A	ATCTCTGTGTGC	4957.76	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=1.832;DP=666;FS=1.493;HRun=0;HaplotypeScore=227.0982;InbreedingCoeff=0.9951;MQ=84.30;MQ0=0;MQRankSum=-9.120;QD=70.83;ReadPosRankSum=-1.601;VQSLOD=4.4241;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:28,21:52:63.22:3480,63,0	0/0:7,0:7:18.06:0,18,583	0/0:23,0:23:48.15:0,48,1337	0/0:22,0:22:51.17:0,51,1466	1/1:4,11:18:26.25:1478,26,0	0/0:15,0:15:42.13:0,42,1335	0/0:29,0:29:69.24:0,69,2198	0/0:28,0:28:78.22:0,78,2343	0/0:21,0:21:57.18:0,57,1723	0/0:20,0:20:54.19:0,54,1797	0/0:14,0:14:39.13:0,39,1253	0/0:27,0:27:60.19:0,60,1902	0/0:20,0:20:48.16:0,48,1548	0/0:26,0:26:57.16:0,57,1743	0/0:27,0:27:72.23:0,72,2153	0/0:31,0:31:78.25:0,78,2514	0/0:19,0:19:51.18:0,51,1628	0/0:19,0:19:36.12:0,36,1112	0/0:30,0:30:60.20:0,60,1879	0/0:21,0:21:57.20:0,57,1848	0/0:45,0:45:99:0,123,3768	0/0:18,0:18:48.16:0,48,1585	0/0:22,0:22:63.22:0,63,2022	0/0:28,0:28:75.24:0,75,2382	0/0:25,0:25:66.23:0,66,2166	0/0:24,0:24:66.23:0,66,2213	0/0:20,0:20:54.16:0,54,1616	0/0:15,0:15:39.13:0,39,1177
chr10	69704512	.	G	GGTGT	4864.62	PASS	AB=0.704;AC=23;AF=0.411;AN=56;BaseQRankSum=-0.153;DP=702;FS=0.000;HRun=0;HaplotypeScore=140.4552;InbreedingCoeff=0.6808;MQ=64.65;MQ0=13;MQRankSum=-5.308;QD=13.59;ReadPosRankSum=-3.026;VQSLOD=3.4463;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:10,0:37:6.79:142,7,0	0/0:9,0:10:27.07:0,27,388	0/0:33,0:19:3.01:0,3,47	0/0:33,0:15:3.01:0,3,46	1/1:7,0:34:11.16:208,11,0	0/0:21,0:22:15.15:0,15,521	0/0:26,0:32:35.31:0,35,615	1/1:25,5:32:27.99:413,28,0	0/0:21,0:23:36.11:0,36,534	0/0:25,0:28:46.66:0,47,816	0/0:17,0:18:33.08:0,33,463	0/0:18,0:18:30.10:0,30,459	0/0:17,0:18:44.88:0,45,660	0/0:23,0:23:41.84:0,42,646	0/0:16,0:16:33.11:0,33,525	0/0:26,0:32:29.09:0,29,658	1/1:18,0:23:20.95:266,21,0	1/1:8,0:13:8.95:73,9,0	0/1:20,2:22:26.54:250,0,27	1/1:18,11:31:35.61:779,36,0	1/1:14,18:34:38.60:814,39,0	0/0:20,0:20:45.14:0,45,691	1/1:22,0:28:8.73:87,9,0	1/1:21,0:32:5.98:104,6,0	0/0:17,0:17:24.07:0,24,354	1/1:18,4:25:35.43:605,35,0	0/1:10,11:26:15.45:506,0,15	0/1:6,8:17:14.66:618,0,15
chr10	69704946	.	TTTTA	T	924.04	PASS	AB=0.767;AC=14;AF=0.333;AN=42;BaseQRankSum=4.862;DP=275;FS=4.536;HRun=0;HaplotypeScore=54.8202;InbreedingCoeff=0.4875;MQ=57.93;MQ0=0;MQRankSum=0.345;QD=9.15;ReadPosRankSum=3.257;VQSLOD=1.7629;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:5,0:11:6.02:0,6,104	./.	./.	./.	0/0:3,0:10:17.98:0,18,288	0/0:14,0:14:33.11:0,33,773	0/0:3,0:3:3.01:0,3,70	0/0:38,0:38:30.10:0,30,620	1/1:3,3:6:9.03:139,9,0	0/0:9,0:9:6.02:0,6,129	0/0:8,0:8:6.01:0,6,95	./.	0/0:6,0:6:6.02:0,6,137	0/0:8,0:8:3.01:0,3,70	0/0:7,0:7:3.01:0,3,70	0/0:9,0:9:3.01:0,3,70	0/1:12,11:23:12.80:344,0,13	1/1:8,7:15:15.05:232,15,0	1/1:5,0:7:7.82:61,8,0	1/1:12,0:15:6.48:57,6,0	0/0:9,0:9:0.47:0,0,1	./.	./.	./.	0/0:13,0:13:15.04:0,15,308	0/1:5,0:6:21.91:22,0,64	1/1:11,0:13:6.01:56,6,0	1/1:9,0:15:17.99:161,18,0
chr10	69705579	.	TTATATATATATATA	T	1180.42	PASS	AB=1.000;AC=5;AF=0.109;AN=46;BaseQRankSum=2.271;DP=256;FS=21.964;HRun=0;HaplotypeScore=100.7270;InbreedingCoeff=0.4276;MQ=73.29;MQ0=3;MQRankSum=-4.504;QD=14.94;ReadPosRankSum=-0.891;VQSLOD=0.5446;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:8,22:29:35.49:1045,35,0	0/0:1,0:1:3.01:0,3,204	0/0:13,0:6:0.89:0,1,2	0/1:27,0:10:14.23:14,0,31	1/1:5,16:21:20.63:240,21,0	0/0:7,0:7:15.05:0,15,1025	./.	0/0:10,0:10:12.03:0,12,378	./.	0/0:4,0:6:6.02:0,6,373	./.	0/0:9,0:9:15.05:0,15,881	0/0:3,0:7:15.05:0,15,738	0/0:8,0:8:3.01:0,3,205	0/0:3,0:5:9:0,9,235	0/0:4,0:4:6.02:0,6,327	0/0:30,0:30:69.24:0,69,3451	0/0:10,0:10:21.07:0,21,752	0/0:6,0:8:9.03:0,9,320	0/0:7,0:8:12.03:0,12,294	0/0:4,0:7:9.03:0,9,393	./.	0/0:3,0:3:3.01:0,3,70	./.	0/0:7,0:7:12.04:0,12,679	0/0:6,0:7:6.02:0,6,289	0/0:4,0:8:9.03:0,9,433	0/0:5,0:4:3.01:0,3,64
chr10	69705604	.	TATAA	T	482.98	PASS	AB=0.954;AC=7;AF=0.130;AN=54;BaseQRankSum=3.820;DP=208;FS=6.275;HRun=0;HaplotypeScore=51.2128;InbreedingCoeff=0.3279;MQ=57.22;MQ0=3;MQRankSum=-3.158;QD=6.71;ReadPosRankSum=3.129;VQSLOD=0.8147;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:28,0:27:16.67:17,0,178	0/0:2,0:2:6.01:0,6,111	0/0:7,0:3:2.97:0,3,28	0/0:8,0:1:0:0,0,0	0/0:17,0:17:10.87:0,11,117	0/0:12,0:12:36.04:0,36,602	0/0:3,0:3:9:0,9,80	0/0:11,0:11:30.05:0,30,294	0/0:5,0:5:15.01:0,15,135	0/0:5,0:5:12.03:0,12,172	0/0:2,0:2:3:0,3,28	0/0:5,0:5:15.02:0,15,276	0/0:7,0:7:17.81:0,18,132	0/0:5,0:5:15.02:0,15,191	0/0:4,0:4:9.02:0,9,119	0/0:7,0:7:21.03:0,21,263	0/1:21,4:25:99:234,0,147	1/1:0,9:9:18.02:314,18,0	0/0:4,0:4:11.96:0,12,99	0/0:6,0:6:18.02:0,18,167	0/1:7,0:7:1.05:1,0,130	0/0:3,0:3:9:0,9,80	1/1:3,0:3:3.01:38,3,0	./.	0/0:7,0:7:21.04:0,21,363	0/0:4,0:4:11.99:0,12,106	0/0:9,0:9:23.94:0,24,225	0/0:3,0:2:5.98:0,6,49
chr10	69705606	.	TAA	T	833.39	PASS	AB=1.000;AC=8;AF=0.154;AN=52;BaseQRankSum=4.538;DP=214;FS=7.576;HRun=4;HaplotypeScore=44.0733;InbreedingCoeff=0.4304;MQ=57.45;MQ0=3;MQRankSum=1.032;QD=17.36;ReadPosRankSum=5.799;VQSLOD=0.0405;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:27:45.81:0,46,272	0/0:2,0:2:6.01:0,6,83	0/0:7,0:3:2.97:0,3,28	./.	0/0:17,0:17:19.38:0,19,131	0/0:12,0:12:36.04:0,36,463	0/0:4,0:4:12:0,12,105	0/0:12,0:12:30.04:0,30,285	0/0:6,0:6:18.01:0,18,162	0/0:7,0:7:18.03:0,18,179	0/0:2,0:2:3:0,3,28	0/0:4,0:4:12.01:0,12,161	0/1:6,0:6:37.72:39,0,38	0/0:6,0:6:18.02:0,18,191	0/0:4,0:4:9.02:0,9,93	0/0:7,0:7:20.62:0,21,204	1/1:12,14:26:27.33:759,27,0	1/1:9,0:9:17.93:142,18,0	0/1:4,0:4:2.09:2,0,46	0/0:6,0:6:14.70:0,15,134	0/0:8,0:8:7.22:0,7,132	0/0:3,0:3:9:0,9,80	1/1:3,0:3:2.99:24,3,0	./.	0/0:7,0:7:21.04:0,21,280	0/0:4,0:4:0.59:0,1,73	0/0:10,0:10:1.22:0,1,136	0/0:3,0:2:5.98:0,6,49
chr10	69706484	.	A	AT	5795.66	PASS	AC=24;AF=0.429;AN=56;BaseQRankSum=-3.732;DP=517;FS=4.739;HRun=8;HaplotypeScore=56.0199;InbreedingCoeff=0.9588;MQ=69.73;MQ0=0;MQRankSum=-1.526;QD=24.66;ReadPosRankSum=3.159;VQSLOD=5.7246;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:2,0:24:56.70:289,57,0	0/0:13,0:13:36.02:0,36,329	0/0:16,0:16:32.47:0,32,274	0/0:13,0:12:2.83:0,3,205	1/1:6,0:25:44.45:226,44,0	0/0:35,0:35:96.05:0,96,879	0/0:13,0:13:36.02:0,36,329	0/0:35,0:35:81.01:0,81,738	0/0:14,0:14:39.01:0,39,357	0/0:22,0:22:53.98:0,54,486	0/0:18,0:17:51.03:0,51,466	0/0:10,0:10:27.01:0,27,247	0/0:18,0:18:42.02:0,42,384	0/0:12,0:12:33:0,33,297	0/0:18,0:18:48.02:0,48,439	0/0:12,0:12:33.02:0,33,302	1/1:2,18:20:51.15:588,51,0	1/1:2,11:13:5.63:318,6,0	1/1:4,18:23:56.99:627,57,0	1/1:0,25:25:69.20:795,69,0	1/1:3,17:21:26.36:521,26,0	0/0:19,0:20:53.06:0,53,473	1/1:5,15:20:45.13:519,45,0	1/1:0,11:11:33.10:381,33,0	0/0:13,0:12:32.99:0,33,297	1/1:3,16:19:48.14:554,48,0	1/1:1,20:22:29.70:595,30,0	1/1:0,12:12:33.10:381,33,0
chr10	69707676	.	G	GGTGTGTGT	1055.80	PASS	AB=1.000;AC=16;AF=0.348;AN=46;BaseQRankSum=0.850;DP=553;FS=6.185;HRun=0;HaplotypeScore=159.5522;InbreedingCoeff=0.4453;MQ=71.49;MQ0=8;MQRankSum=-1.566;QD=5.56;ReadPosRankSum=-2.175;VQSLOD=1.7225;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:28:2.99:23,3,0	0/0:11,0:11:9.03:0,9,193	./.	./.	0/1:10,0:10:0:0,0,0	./.	0/1:28,0:28:12.81:13,0,104	1/1:16,0:14:2.96:19,3,0	0/0:26,0:26:2.33:0,2,468	0/0:18,0:18:1.21:0,1,24	./.	0/1:12,0:12:8.44:8,0,210	0/0:13,0:13:11.86:0,12,183	0/0:22,0:24:11.78:0,12,236	0/0:35,0:36:20.31:0,20,373	0/0:22,0:23:14.77:0,15,312	1/1:15,5:19:10.74:274,11,0	1/1:15,0:15:24.49:373,24,0	0/0:14,0:14:0.98:0,1,53	0/0:23,0:22:1.55:0,2,4	0/0:40,0:39:2.99:0,3,25	0/0:21,0:21:8.80:0,9,113	1/1:21,0:21:12.40:133,12,0	1/1:29,0:28:20.64:355,21,0	0/1:11,0:10:0:0,0,0	0/0:16,0:16:2.15:0,2,54	0/0:16,0:16:8.71:0,9,170	./.
chr10	69707720	.	TGTGA	T	1845.86	PASS	AB=0.873;AC=13;AF=0.232;AN=56;BaseQRankSum=0.505;DP=535;FS=15.310;HRun=0;HaplotypeScore=106.3612;InbreedingCoeff=0.7189;MQ=63.64;MQ0=16;MQRankSum=0.591;QD=12.82;ReadPosRankSum=0.830;VQSLOD=2.0701;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:30,0:30:3.68:265,0,4	0/0:6,0:6:15.92:0,16,304	0/0:27,0:19:27.57:0,28,437	0/0:24,0:14:28.38:0,28,314	0/1:8,0:8:23.71:84,0,24	0/0:12,0:12:23.98:0,24,231	0/0:26,0:26:57.86:0,58,629	0/0:13,0:12:29.88:0,30,254	0/0:31,0:30:69.07:0,69,1060	0/0:15,0:15:36.04:0,36,448	0/0:11,0:11:26.98:0,27,256	0/0:22,0:22:39.53:0,40,581	0/0:15,0:15:33:0,33,444	0/0:21,0:21:53.94:0,54,661	0/0:25,0:24:57.06:0,57,795	0/0:25,0:25:54.03:0,54,798	0/0:19,0:18:26.55:0,27,237	0/0:13,0:13:32.88:0,33,503	1/1:2,10:11:29.93:270,30,0	0/1:8,13:19:10.91:47,0,11	1/1:36,0:35:74.56:654,75,0	0/0:24,0:24:56.95:0,57,854	0/0:16,0:15:30.36:0,30,329	0/0:36,0:35:65.66:0,66,663	0/0:10,0:9:21:0,21,212	1/1:17,0:17:27.04:427,27,0	1/1:6,10:15:11.91:182,12,0	1/1:4,0:4:9:96,9,0
chr10	69707823	.	TG	T	2702.50	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=5.380;DP=661;FS=0.921;HRun=3;HaplotypeScore=96.5047;InbreedingCoeff=0.9975;MQ=94.93;MQ0=0;MQRankSum=-2.364;QD=29.38;ReadPosRankSum=1.855;VQSLOD=3.1114;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:99:0,111,1573	0/0:11,0:11:27.09:0,27,388	0/0:32,0:32:80.24:0,80,1302	0/0:32,0:32:84.24:0,84,1148	0/0:29,0:29:81.27:0,81,1162	0/0:25,0:25:72.24:0,72,1034	0/0:26,0:26:78.26:0,78,1122	0/0:18,0:18:51.17:0,51,734	0/0:17,0:17:48.15:0,48,672	0/0:25,0:25:75.25:0,75,1080	0/0:24,0:24:69.23:0,69,989	0/0:22,0:22:63.19:0,63,873	0/0:22,0:22:63.21:0,63,907	0/0:20,0:20:57.19:0,57,818	0/0:24,0:24:72.24:0,72,1037	0/0:22,0:22:63.21:0,63,907	1/1:1,25:26:69.22:855,69,0	1/1:1,18:19:48.15:595,48,0	0/0:16,0:16:48.16:0,48,690	0/0:31,0:31:90.30:0,90,1295	0/0:27,0:27:78.26:0,78,1123	0/0:30,0:30:90.30:0,90,1295	1/1:0,18:18:45.14:558,45,0	1/1:1,28:28:69.22:855,69,0	0/0:21,0:21:63.20:0,63,891	0/0:28,0:28:84.28:0,84,1208	0/0:23,0:23:66.21:0,66,931	0/0:6,0:6:18.06:0,18,259
chr10	69707942	.	AACACACACACACAC	A	3443.73	PASS	AB=0.829;AC=18;AF=0.321;AN=56;BaseQRankSum=7.358;DP=500;FS=1.431;HRun=0;HaplotypeScore=183.4989;InbreedingCoeff=0.7164;MQ=60.94;MQ0=8;MQRankSum=-5.439;QD=21.52;ReadPosRankSum=3.179;VQSLOD=2.1376;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:75.26:0,75,4243	0/0:1,0:1:3.01:0,3,189	0/0:32,0:15:11.96:0,12,399	0/0:32,0:21:15.03:0,15,356	0/0:19,0:19:42.14:0,42,2471	0/0:9,0:18:12.02:0,12,291	0/0:10,0:19:21.06:0,21,590	0/0:27,0:27:51.18:0,51,2518	0/0:13,0:13:30.10:0,30,1724	0/0:20,0:20:46.40:0,46,2155	0/0:12,0:12:21.07:0,21,1155	0/0:16,0:16:30.57:0,31,1823	0/0:11,0:11:24.08:0,24,1315	0/0:17,0:16:36.12:0,36,2021	0/0:14,0:17:33.58:0,34,2104	0/0:22,0:23:48.15:0,48,2868	1/1:13,0:16:11.61:129,12,0	0/1:9,0:11:62.83:63,0,109	1/1:11,6:17:14.82:587,15,0	1/1:10,8:19:12.04:476,12,0	1/1:20,1:20:11.95:115,12,0	0/0:18,0:18:30.09:0,30,1694	1/1:4,0:10:3.01:63,3,0	0/1:20,0:23:56.12:75,0,56	0/0:7,0:7:15.05:0,15,869	1/1:11,9:21:30.09:987,30,0	1/1:8,10:18:21.07:832,21,0	1/1:1,1:2:3.01:119,3,0
chr10	69708789	.	G	GA	562.85	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-3.279;DP=639;FS=3.164;HRun=6;HaplotypeScore=75.6026;InbreedingCoeff=0.9969;MQ=67.54;MQ0=0;MQRankSum=1.075;QD=28.14;ReadPosRankSum=-0.265;VQSLOD=4.1470;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:12:27.06:0,27,275	0/0:8,0:8:24.05:0,24,245	0/0:18,0:17:45.05:0,45,440	0/0:19,0:19:51.07:0,51,502	0/0:35,0:35:99:0,99,1010	0/0:24,0:24:69.16:0,69,704	0/0:19,0:19:51.11:0,51,520	0/0:37,0:37:99:0,102,1017	0/0:19,0:19:54.12:0,54,551	0/0:24,0:24:63.13:0,63,637	0/0:31,0:31:72.15:0,72,734	0/0:18,0:18:45.10:0,45,459	0/0:23,0:23:66.10:0,66,657	0/0:17,0:17:51.10:0,51,513	0/0:17,0:17:45.10:0,45,459	0/0:21,0:21:63.11:0,63,625	0/0:20,0:20:54.12:0,54,550	0/0:31,0:31:84.18:0,84,856	0/0:21,0:21:57.11:0,57,574	0/0:26,0:26:75.17:0,75,765	0/0:33,0:32:84.17:0,84,850	1/1:3,17:20:54.13:658,54,0	0/0:23,0:23:57.13:0,57,581	0/0:15,0:15:45.10:0,45,459	0/0:22,0:22:60.13:0,60,612	0/0:29,0:29:87.17:0,87,879	0/0:26,0:26:66.09:0,66,651	0/0:31,0:31:93.21:0,93,949
chr10	69709225	.	GATGTATGTATGT	G	3897.72	PASS	AB=0.908;AC=15;AF=0.268;AN=56;BaseQRankSum=0.282;DP=758;FS=4.906;HRun=0;HaplotypeScore=286.3010;InbreedingCoeff=0.5218;MQ=63.83;MQ0=9;MQRankSum=1.677;QD=15.35;ReadPosRankSum=3.407;VQSLOD=2.0690;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:27.89:0,28,181	0/0:12,0:12:21.49:0,21,387	0/0:38,0:25:5.99:0,6,52	0/0:32,0:24:5.92:0,6,39	0/0:28,0:28:32.96:0,33,426	0/0:26,0:25:18.03:0,18,399	0/1:22,0:23:4.08:4,0,17	0/0:40,0:37:36.06:0,36,439	0/0:34,0:34:45.23:0,45,1144	0/0:29,0:29:44.55:0,45,875	0/0:17,0:17:22.45:0,22,764	0/0:27,0:26:38.03:0,38,929	0/0:31,0:31:32.53:0,33,1076	0/0:27,0:27:18.98:0,19,630	0/0:33,0:33:28.66:0,29,627	0/0:20,0:19:26.43:0,26,714	0/0:18,0:17:5.68:0,6,209	0/1:15,0:16:14.04:14,0,242	1/1:16,8:24:20.93:308,21,0	1/1:5,17:22:35.76:341,36,0	1/1:32,0:32:57.05:865,57,0	0/0:25,0:25:31.36:0,31,773	0/1:27,0:27:57.47:57,0,106	0/1:22,0:22:19.08:37,0,19	0/0:34,0:34:38.22:0,38,685	0/1:17,22:39:75.82:672,0,76	1/1:23,0:23:51.05:726,51,0	1/1:25,0:25:63.12:874,63,0
chr10	69709266	.	ATGTT	A	4351.22	PASS	AB=0.993;AC=29;AF=0.558;AN=52;BaseQRankSum=11.485;DP=718;FS=1.359;HRun=0;HaplotypeScore=183.7460;InbreedingCoeff=-0.7903;MQ=54.75;MQ0=25;MQRankSum=3.585;QD=6.07;ReadPosRankSum=0.986;VQSLOD=4.1356;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:29,0:28:35.11:266,35,0	0/1:11,0:11:43.72:44,0,257	./.	./.	0/1:24,0:24:99:123,0,155	0/1:25,0:24:99:142,0,302	0/1:25,0:22:51.95:52,0,169	0/1:39,6:21:76.11:76,0,195	0/1:30,0:30:99:142,0,597	0/1:37,0:37:99:150,0,690	0/1:22,0:21:90.08:90,0,390	0/1:36,0:35:99:246,0,466	0/1:32,0:32:52.60:53,0,797	0/1:41,0:41:99:108,0,717	0/1:37,0:37:99:276,0,478	0/1:23,1:23:91.37:91,0,482	0/1:14,0:12:16.23:16,0,104	0/1:19,0:19:99:170,0,102	0/1:14,0:14:76.40:76,0,103	0/1:25,0:25:21.58:22,0,163	0/1:35,0:34:99:214,0,302	0/1:28,0:28:99:171,0,335	1/1:30,0:30:54.03:550,54,0	1/1:26,0:26:53.56:418,54,0	0/1:26,0:26:99:297,0,296	0/1:30,0:30:99:133,0,180	0/1:22,0:22:99:183,0,169	0/1:30,0:28:99:243,0,148
chr10	69709270	.	TTGTATGTATGTATGTA	T	2836.62	PASS	AB=1.000;AC=11;AF=0.212;AN=52;BaseQRankSum=1.636;DP=707;FS=3.090;HRun=0;HaplotypeScore=351.1294;InbreedingCoeff=0.8595;MQ=54.49;MQ0=24;MQRankSum=-0.874;QD=19.98;ReadPosRankSum=-5.693;VQSLOD=0.8788;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:28,0:27:48.08:634,48,0	0/0:11,0:11:30.05:0,30,983	./.	./.	1/1:17,6:23:30.43:417,30,0	0/0:26,0:25:42.14:0,42,1570	0/0:25,0:22:17.41:0,17,450	0/0:41,0:18:26.54:0,27,339	0/0:31,0:31:72.19:0,72,2678	0/0:36,0:36:92.25:0,92,2490	0/0:20,0:19:48.16:0,48,1704	0/0:37,0:36:84.14:0,84,2331	0/0:34,0:34:87.30:0,87,2982	0/0:39,0:39:81.28:0,81,2487	0/0:35,0:35:63.14:0,63,1959	0/0:23,0:22:45.15:0,45,1583	1/1:15,0:14:12.37:182,12,0	1/1:18,0:18:29.44:803,29,0	0/0:16,0:15:7.58:0,8,119	0/0:24,0:24:30.10:0,30,491	0/0:32,0:31:48.91:0,49,774	0/0:28,0:28:46.39:0,46,1414	0/1:29,0:29:24.92:423,0,25	1/1:28,0:28:29.22:550,29,0	0/0:25,0:25:39.13:0,39,1460	0/0:30,0:30:30.40:0,30,546	0/0:24,0:24:46.53:0,47,762	0/0:27,0:25:30.06:0,30,447
chr10	69709350	.	CTGTGTGTGTGTGTGTGTGTGTG	C	1099.17	PASS	AB=0.878;AC=7;AF=0.130;AN=54;BaseQRankSum=4.691;DP=598;FS=0.000;HRun=0;HaplotypeScore=301.8490;InbreedingCoeff=0.3410;MQ=62.68;MQ0=21;MQRankSum=-4.790;QD=10.88;ReadPosRankSum=-0.552;VQSLOD=1.3745;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:24,1:24:3.01:174,3,0	0/0:7,0:7:4.83:0,5,311	./.	0/0:39,0:22:3.01:0,3,98	1/1:18,11:28:18.01:886,18,0	0/0:19,0:19:23.95:0,24,1529	0/0:20,0:22:44.17:0,44,2842	0/0:29,0:24:15.05:0,15,694	0/0:16,0:16:22.83:0,23,1788	0/0:22,0:22:45.15:0,45,2933	0/0:18,0:18:21.06:0,21,1436	0/0:21,0:21:39.60:0,40,2936	0/0:28,0:28:44.36:0,44,2698	0/0:25,0:26:27.09:0,27,1827	0/0:18,0:18:15.05:0,15,1176	0/0:15,0:15:21.06:0,21,1083	0/1:16,0:17:7.96:8,0,410	0/1:8,0:9:60.88:61,0,212	0/0:18,0:18:21.07:0,21,977	0/0:26,0:25:33.11:0,33,1638	0/0:22,0:22:21.07:0,21,1308	0/0:27,0:26:51.18:0,51,4137	0/1:16,0:20:97.36:97,0,460	0/0:17,0:17:1.81:0,2,355	0/0:20,0:19:33.11:0,33,2596	0/0:19,0:20:48.16:0,48,2763	0/0:19,0:19:21.54:0,22,1208	0/0:14,0:16:21.07:0,21,1164
chr10	69709411	.	CT	C	397.54	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=0.782;DP=487;FS=2.355;HRun=4;HaplotypeScore=79.3237;InbreedingCoeff=0.9562;MQ=72.16;MQ0=6;MQRankSum=-0.044;QD=26.50;ReadPosRankSum=-1.816;VQSLOD=2.0672;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:26,0:26:69.18:0,69,937	0/0:6,0:6:12.51:0,13,169	0/0:29,0:20:57.11:0,57,684	0/0:32,1:22:47.33:0,47,648	0/0:26,0:26:60.53:0,61,771	0/0:16,0:15:45.15:0,45,630	0/0:16,0:16:36.11:0,36,486	1/1:1,14:15:42.12:492,42,0	0/0:15,0:15:42.12:0,42,568	0/0:20,0:20:60.20:0,60,828	0/0:14,0:14:36.12:0,36,503	0/0:23,0:22:63.21:0,63,881	0/0:14,0:14:42.14:0,42,583	0/0:17,0:17:48.13:0,48,650	0/0:20,0:20:60.20:0,60,840	0/0:13,0:13:34.93:0,35,467	0/0:24,0:24:72.19:0,72,963	0/0:17,0:16:42.13:0,42,572	0/0:5,0:5:15.05:0,15,210	0/0:16,0:16:48.15:0,48,655	0/0:20,0:20:57.19:0,57,798	0/0:15,0:14:39.11:0,39,511	0/0:14,0:14:39.09:0,39,518	0/0:13,0:13:29.96:0,30,419	0/0:23,0:23:63.20:0,63,866	0/0:12,0:12:36.10:0,36,471	0/0:15,0:15:45.15:0,45,629	0/0:9,0:9:27.09:0,27,377
chr10	69709601	.	AT	A	2052	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=0.566;DP=549;FS=8.225;HRun=5;HaplotypeScore=100.3147;InbreedingCoeff=0.9952;MQ=75.76;MQ0=0;MQRankSum=-0.315;QD=24.14;ReadPosRankSum=3.164;VQSLOD=2.3924;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:87.10:0,87,1055	0/0:6,0:6:18.06:0,18,246	0/0:28,0:28:55.31:0,55,706	0/0:12,0:12:20.34:0,20,187	0/0:32,0:32:71.30:0,71,1005	0/0:22,0:22:66.21:0,66,886	0/0:18,0:18:48.12:0,48,607	0/0:0,0:18:48.89:0,49,274	0/0:16,0:16:45.13:0,45,583	0/0:25,0:25:72.19:0,72,901	0/0:14,0:14:39.02:0,39,506	0/0:20,0:20:54.17:0,54,719	0/0:21,0:21:57.16:0,57,733	0/0:20,0:20:60.16:0,60,762	0/0:17,0:17:45.11:0,45,569	0/0:15,0:15:45.12:0,45,570	1/1:2,23:25:60.08:650,60,0	1/1:1,13:14:36.10:408,36,0	0/0:17,0:17:51.15:0,51,669	0/0:24,0:24:63.17:0,63,800	0/0:9,0:9:24:0,24,260	0/0:20,0:20:57.12:0,57,728	1/1:0,32:32:65.61:747,66,0	1/1:0,14:14:36.10:408,36,0	0/0:17,0:17:45.13:0,45,573	0/0:33,0:33:90.25:0,90,1115	0/0:21,0:21:51.17:0,51,695	0/0:9,0:9:24.05:0,24,294
chr10	69709633	.	CTGTT	C	7773.74	PASS	AB=0.512;AC=15;AF=0.268;AN=56;BaseQRankSum=9.669;DP=588;FS=9.750;HRun=0;HaplotypeScore=108.9721;InbreedingCoeff=0.9043;MQ=77.85;MQ0=3;MQRankSum=-4.971;QD=45.73;ReadPosRankSum=3.426;VQSLOD=5.4883;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,28:27:57.15:1148,57,0	0/0:9,0:9:27.09:0,27,782	0/0:21,0:21:36.18:0,36,1129	0/0:18,0:18:31.24:0,31,1139	1/1:0,35:35:72.24:1471,72,0	0/0:25,0:25:75.26:0,75,2173	0/0:19,0:19:54.19:0,54,1564	0/0:27,0:27:78.22:0,78,2051	0/0:21,0:21:63.22:0,63,1796	0/0:27,0:27:78.26:0,78,2169	0/0:23,0:23:69.22:0,69,1792	0/0:23,0:23:69.22:0,69,1934	0/0:20,0:20:60.21:0,60,1720	0/0:20,0:20:60.21:0,60,1663	0/0:22,0:22:66.21:0,66,1838	0/0:21,0:21:63.20:0,63,1705	0/0:22,0:22:66.23:0,66,1854	0/0:15,0:15:45.15:0,45,1218	1/1:0,17:17:42.01:818,42,0	1/1:0,25:25:69.19:1364,69,0	1/1:0,10:10:14.67:268,15,0	0/0:22,0:22:66.18:0,66,1834	0/0:31,0:31:86.94:0,87,2377	0/0:17,0:17:51.16:0,51,1387	0/0:15,0:15:45.15:0,45,1259	0/1:1,20:21:26.76:1123,0,27	1/1:0,26:25:60.14:1206,60,0	1/1:0,7:7:18.06:375,18,0
chr10	69710882	.	T	TCTGC	2347.43	PASS	AC=6;AF=0.115;AN=52;BaseQRankSum=-7.775;DP=375;FS=43.163;HRun=0;HaplotypeScore=64.0735;InbreedingCoeff=0.6073;MQ=72.66;MQ0=1;MQRankSum=-0.714;QD=29.34;ReadPosRankSum=0.582;VQSLOD=1.5502;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:9,0:15:9.01:0,9,84	0/0:2,0:2:6.02:0,6,94	0/0:11,0:9:1.21:0,1,43	0/0:23,0:19:5.30:0,5,83	0/0:2,0:5:6.01:0,6,56	0/0:6,0:6:9.03:0,9,141	0/0:26,0:26:27.08:0,27,392	./.	0/0:6,0:5:6.02:0,6,92	0/0:8,0:8:12.03:0,12,169	0/0:6,0:6:9:0,9,95	0/0:16,0:16:30.06:0,30,441	0/0:22,0:22:48.16:0,48,742	0/0:19,0:19:21.06:0,21,307	0/0:16,0:16:15.04:0,15,213	0/0:15,0:15:30.10:0,30,466	1/1:9,15:25:36.12:851,36,0	1/1:9,11:23:30.10:710,30,0	0/0:7,0:8:3:0,3,28	0/0:4,0:11:14.58:0,15,125	0/0:15,0:22:12.01:0,12,112	0/0:2,0:2:6.02:0,6,94	./.	1/1:14,16:32:39.13:922,39,0	0/0:7,0:7:6.02:0,6,94	0/0:10,0:13:6.01:0,6,56	0/0:8,0:18:11.75:0,12,111	0/0:1,0:1:0:0,0,0
chr10	69712252	.	C	CGTGT	4154.66	PASS	AC=10;AF=0.179;AN=56;BaseQRankSum=2.767;DP=543;FS=9.862;HRun=0;HaplotypeScore=127.8650;InbreedingCoeff=0.9177;MQ=53.96;MQ0=8;MQRankSum=-2.372;QD=39.95;ReadPosRankSum=-2.640;VQSLOD=2.7608;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:32:47.83:0,48,899	0/0:14,0:14:36:0,36,637	0/0:13,0:5:7.26:0,7,66	0/0:13,0:2:5.99:0,6,61	0/0:26,0:25:39.02:0,39,578	0/0:19,0:19:51.13:0,51,880	0/0:24,0:23:63.03:0,63,1012	0/0:25,0:24:46.28:0,46,535	0/0:10,0:10:27.09:0,27,485	0/0:23,0:22:63.20:0,63,1134	0/0:15,0:15:39.05:0,39,663	0/0:22,0:22:60.08:0,60,1030	0/0:12,0:12:26.99:0,27,408	0/0:19,0:19:45.15:0,45,809	0/0:12,0:11:30.10:0,30,544	0/0:12,0:12:36.07:0,36,588	0/0:21,0:21:44.93:0,45,627	0/0:15,0:14:30.06:0,30,434	1/1:16,1:19:50.97:809,51,0	1/1:12,1:15:15.05:284,15,0	0/0:3,18:21:0:0,0,0	0/0:24,0:24:57.15:0,57,987	0/0:25,0:25:53.99:0,54,705	0/0:21,0:20:23.86:0,24,360	0/0:19,0:19:45.15:0,45,846	1/1:23,0:27:77.51:1277,78,0	1/1:17,1:21:42.81:752,43,0	1/1:13,2:20:47.65:1032,48,0
chr10	69712279	.	ACG	A	1189.03	PASS	AB=0.971;AC=23;AF=0.411;AN=56;BaseQRankSum=9.437;DP=475;FS=2.783;HRun=0;HaplotypeScore=111.1533;InbreedingCoeff=0.4478;MQ=47.14;MQ0=16;MQRankSum=-4.779;QD=4.61;ReadPosRankSum=-3.151;VQSLOD=2.3754;culprit=QD;set=input10	GT:AD:DP:GQ:PL	1/1:28,3:29:16.01:168,16,0	0/0:13,0:13:10.64:0,11,389	1/1:4,0:1:2.04:6,2,0	0/0:7,0:1:0:0,0,0	0/1:15,3:17:9.20:28,0,9	0/0:23,0:23:58.47:0,58,692	0/0:22,0:20:25.69:0,26,660	1/1:14,1:15:24.22:193,24,0	0/0:9,0:9:26.64:0,27,313	0/0:25,0:23:43.75:0,44,650	0/0:17,0:17:20.80:0,21,345	0/0:18,0:18:45.07:0,45,671	0/1:10,0:10:9.47:9,0,292	0/0:21,2:22:7.02:0,7,597	0/0:12,0:12:24.29:0,24,434	0/0:7,0:7:20.42:0,20,320	1/1:18,5:22:3.69:132,4,0	1/1:17,2:16:15.25:212,15,0	0/1:23,0:20:68.38:92,0,68	1/1:16,0:15:4.40:28,4,0	0/1:20,0:17:0.22:0,0,1	0/0:21,0:21:45.13:0,45,760	1/1:11,3:14:18.79:169,19,0	1/1:13,3:14:7.53:54,8,0	0/0:20,0:20:13.37:0,13,577	0/1:15,0:15:23.43:98,0,23	0/1:15,1:16:1.59:83,0,2	0/1:18,0:18:31.38:99,0,31
chr10	69712281	.	GCA	G	143.52	PASS	AB=0.944;AC=11;AF=0.204;AN=54;BaseQRankSum=7.000;DP=474;FS=3.385;HRun=0;HaplotypeScore=118.2230;InbreedingCoeff=-0.0043;MQ=47.08;MQ0=16;MQRankSum=-5.604;QD=0.82;ReadPosRankSum=2.447;VQSLOD=2.1220;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:31,0:29:14.87:0,15,119	0/1:11,2:14:40.21:40,0,347	./.	0/0:5,0:2:0:0,0,0	0/0:19,0:18:6:0,6,65	0/0:22,1:23:32.18:0,32,620	0/0:20,1:19:1.50:0,1,468	0/0:14,0:14:2.91:0,3,59	0/0:9,0:9:21.07:0,21,318	0/0:24,0:22:2.79:0,3,560	0/1:16,1:17:9.28:9,0,311	0/0:17,0:17:45.12:0,45,648	0/1:6,4:10:48.70:49,0,256	0/0:22,0:21:13.95:0,14,614	0/0:12,0:12:24.06:0,24,354	0/0:7,0:7:21.07:0,21,312	0/1:23,0:22:5.74:6,0,129	0/1:18,0:15:35.32:35,0,44	0/1:23,1:21:69.15:76,0,69	0/1:16,0:15:0:0,0,0	0/1:20,0:17:0.22:0,0,1	0/0:20,1:21:45.10:0,45,634	0/0:16,0:15:3:0,3,28	0/0:18,0:16:5.82:0,6,45	0/0:18,4:22:5.74:0,6,542	0/0:15,0:15:0.97:0,1,93	0/1:16,0:16:8.40:18,0,8	1/1:17,0:17:4.43:34,4,0
chr10	69712297	.	A	ACG	934.91	PASS	AB=0.867;AC=8;AF=0.143;AN=56;BaseQRankSum=8.236;DP=474;FS=4.666;HRun=0;HaplotypeScore=113.5012;InbreedingCoeff=0.4203;MQ=46.04;MQ0=17;MQRankSum=-7.751;QD=9.74;ReadPosRankSum=0.777;VQSLOD=3.3318;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:31:14.87:0,15,119	0/1:14,0:14:20.53:21,0,372	0/0:7,0:2:5.97:0,6,51	0/0:8,0:6:8.23:0,8,62	0/0:14,0:13:5.98:0,6,65	0/0:22,0:22:38.17:0,38,657	0/0:17,0:15:4.49:0,4,485	0/0:13,0:13:18.66:0,19,164	0/0:11,0:11:30.06:0,30,384	0/0:24,1:23:18.25:0,18,679	0/0:21,0:21:5.71:0,6,444	0/0:16,0:16:44.91:0,45,632	0/0:10,0:10:23.55:0,24,294	0/0:22,0:21:19.52:0,20,625	0/0:11,0:11:30.06:0,30,391	0/0:7,0:7:21.07:0,21,302	0/0:25,0:24:16.09:0,16,203	0/0:18,0:16:6.83:0,7,113	0/1:18,1:16:12.77:197,0,13	0/1:10,7:16:0:0,0,0	0/0:18,3:17:0.32:0,0,1	0/0:24,0:23:57.08:0,57,722	0/0:14,0:13:8.99:0,9,76	0/0:21,0:19:8.94:0,9,70	0/0:18,0:18:41.86:0,42,577	0/1:13,4:16:7.26:264,0,7	1/1:5,8:13:16.95:238,17,0	1/1:7,9:16:24.91:352,25,0
chr10	69712299	.	ACGCACGCACG	A	1352.51	PASS	AB=0.906;AC=13;AF=0.232;AN=56;BaseQRankSum=8.056;DP=455;FS=3.760;HRun=0;HaplotypeScore=155.0425;InbreedingCoeff=0.1503;MQ=46.45;MQ0=15;MQRankSum=-7.526;QD=7.19;ReadPosRankSum=-3.570;VQSLOD=1.7213;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:11,0:24:2.31:0,2,15	0/0:13,0:13:27.41:0,27,1136	0/0:7,0:2:6.02:0,6,217	0/0:10,0:8:24.07:0,24,432	0/0:10,0:12:2.68:0,3,22	0/0:21,0:21:54.18:0,54,1963	0/0:16,0:15:30.60:0,31,1206	1/1:13,0:13:25.98:337,26,0	0/0:11,0:11:33.04:0,33,1145	0/0:24,0:23:40.24:0,40,1833	0/0:21,0:21:11.40:0,11,1337	0/0:16,0:16:45.15:0,45,1598	0/0:10,0:10:23.74:0,24,919	0/0:22,0:21:43.11:0,43,1919	0/0:9,0:9:27.09:0,27,1001	0/0:7,0:7:21.07:0,21,682	0/1:10,14:23:41.65:228,0,42	0/1:5,12:15:16.13:281,0,16	0/1:18,0:15:99:117,0,209	0/1:16,0:15:0:0,0,0	0/1:20,0:16:0.50:1,0,0	0/0:23,0:22:51.17:0,51,1641	0/1:13,1:12:8.02:69,0,8	1/1:20,1:19:3.01:74,3,0	0/0:18,0:18:39.13:0,39,1470	0/1:16,0:15:99:258,0,272	0/1:13,0:13:67.86:68,0,130	0/1:16,0:16:68.53:69,0,339
chr10	69712898	.	T	TA	2446.81	PASS	AB=0.781;AC=16;AF=0.286;AN=56;BaseQRankSum=-6.779;DP=515;FS=0.880;HRun=11;HaplotypeScore=67.0065;InbreedingCoeff=0.8521;MQ=80.79;MQ0=1;MQRankSum=-0.834;QD=14.39;ReadPosRankSum=-1.319;VQSLOD=3.6425;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:2,28:32:56.94:556,57,0	0/0:10,0:10:17.87:0,18,174	0/0:28,0:23:20:0,20,173	0/1:14,0:13:3.44:3,0,26	1/1:9,13:24:20.69:370,21,0	0/0:14,0:14:32.84:0,33,250	0/0:19,0:19:41.76:0,42,320	0/0:29,1:33:75.08:0,75,543	0/0:20,0:21:52.74:0,53,391	0/0:23,0:23:23.02:0,23,345	0/0:13,0:13:29.70:0,30,223	0/0:8,0:9:16.93:0,17,119	0/0:13,0:13:35.83:0,36,274	0/0:16,0:16:38.83:0,39,298	0/0:18,0:18:44.31:0,44,332	0/0:14,0:14:38.82:0,39,298	0/0:3,0:29:44.81:0,45,129	0/0:3,0:13:18.33:0,18,53	1/1:10,16:27:47.99:458,48,0	1/1:5,11:18:23.35:296,23,0	0/1:4,6:10:8.52:80,0,9	0/0:17,0:17:26.82:0,27,208	0/0:6,0:23:27.59:0,28,101	0/0:0,0:16:28.52:0,29,82	0/0:16,0:16:29.84:0,30,232	1/1:4,14:18:18.77:347,19,0	1/1:2,13:15:20.45:321,20,0	1/1:3,8:11:21.04:213,21,0
chr10	69714022	.	TA	T	3957.64	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=5.092;DP=675;FS=0.729;HRun=8;HaplotypeScore=74.3576;InbreedingCoeff=0.9997;MQ=85.12;MQ0=0;MQRankSum=-0.685;QD=24.28;ReadPosRankSum=1.090;VQSLOD=4.3317;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,18:19:54.08:521,54,0	0/0:11,0:11:27.08:0,27,326	0/0:24,0:24:51.13:0,51,598	0/0:20,0:20:42.69:0,43,458	1/1:2,19:21:54.09:522,54,0	0/0:29,0:29:81.25:0,81,978	0/0:15,0:15:45.13:0,45,534	1/1:6,23:29:66.07:626,66,0	0/0:24,0:24:69.20:0,69,822	0/0:34,0:33:84.25:0,84,1004	0/0:30,0:30:81.23:0,81,965	0/0:25,0:25:66.20:0,66,797	0/0:21,0:21:51.15:0,51,609	0/0:11,0:11:33.10:0,33,399	0/0:18,0:18:51.15:0,51,611	0/0:27,0:27:69.21:0,69,834	1/1:3,25:28:69.10:666,69,0	1/1:1,13:14:39.06:377,39,0	0/0:31,0:31:78.23:0,78,932	0/0:36,0:36:96.29:0,96,1160	0/0:22,0:22:63.18:0,63,750	0/0:30,0:30:63.18:0,63,741	1/1:2,25:27:69.11:666,69,0	1/1:2,23:25:60.10:579,60,0	0/0:24,0:24:72.22:0,72,870	0/0:35,0:35:99:0,102,1222	0/0:33,0:33:96.28:0,96,1147	0/0:12,0:12:36.11:0,36,435
chr10	69714430	.	T	TG	8537.65	PASS	AB=0.517;AC=13;AF=0.232;AN=56;BaseQRankSum=16.957;DP=756;FS=8.374;HRun=0;HaplotypeScore=85.4955;InbreedingCoeff=0.9033;MQ=86.57;MQ0=0;MQRankSum=-0.316;QD=41.05;ReadPosRankSum=0.968;VQSLOD=5.1035;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,36:36:93.32:1483,93,0	0/0:13,0:13:39.13:0,39,545	0/0:23,0:23:51.14:0,51,756	0/0:30,0:30:80.25:0,80,1063	1/1:0,25:25:69.24:1096,69,0	0/0:22,0:22:66.22:0,66,923	0/0:18,0:18:54.18:0,54,754	1/1:2,35:37:99:1575,102,0	0/0:28,0:28:84.26:0,84,1154	0/0:33,0:33:99:0,99,1383	0/0:22,0:22:63.21:0,63,880	0/0:18,0:18:51.17:0,51,712	0/0:42,0:42:99:0,126,1761	0/0:34,0:34:99:0,102,1390	0/0:31,0:31:93.30:0,93,1278	0/0:29,0:29:87.29:0,87,1217	1/1:0,28:28:72.25:1150,72,0	1/1:0,19:19:51.17:815,51,0	0/0:19,0:19:54.18:0,54,742	0/0:24,0:24:72.23:0,72,989	0/0:25,0:25:75.25:0,75,1048	0/0:32,0:32:96.32:0,96,1341	1/1:0,33:33:93.32:1485,93,0	0/1:2,28:30:14.67:935,0,15	0/0:24,0:24:72.21:0,72,970	0/0:41,0:41:99:0,120,1664	0/0:24,0:24:72.24:0,72,1005	0/0:16,0:16:48.13:0,48,634
chr10	69714852	.	GGTGTGTGTGTGTGTGTGTGTGT	G	2976.88	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=6.718;DP=599;FS=0.863;HRun=0;HaplotypeScore=306.1144;InbreedingCoeff=0.9480;MQ=65.00;MQ0=13;MQRankSum=-6.756;QD=41.93;ReadPosRankSum=1.361;VQSLOD=1.8725;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:34:63.22:0,63,5351	0/0:4,0:4:12.04:0,12,1039	0/0:34,0:18:15.05:0,15,741	0/0:26,0:16:24.08:0,24,1513	0/0:16,0:17:30.09:0,30,2396	0/0:22,0:22:45.15:0,45,3840	0/0:31,0:33:49.41:0,49,3932	0/0:24,0:26:54.18:0,54,2514	0/0:21,0:20:39.13:0,39,3326	0/0:26,0:27:55.43:0,55,3921	0/0:10,0:13:24.08:0,24,2108	0/0:14,0:15:36.12:0,36,3476	0/0:12,0:13:36.12:0,36,3082	0/0:21,0:22:54.19:0,54,4527	0/0:21,0:23:54.19:0,54,4557	0/0:21,0:24:53.39:0,53,4397	1/1:12,5:17:12.04:647,12,0	1/1:12,10:22:24.08:1356,24,0	0/0:23,0:23:36.12:0,36,2422	0/0:19,0:19:27.95:0,28,1462	0/0:42,0:40:54.64:0,55,3701	0/0:13,0:14:18.06:0,18,1589	1/1:10,4:15:15.05:692,15,0	1/1:12,5:17:8.92:434,9,0	0/0:15,0:19:30.10:0,30,2545	0/0:25,0:22:51.17:0,51,3282	0/0:14,0:17:31.05:0,31,2002	0/0:10,0:10:15.05:0,15,1055
chr10	69715276	.	T	TA	2038.57	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=-9.775;DP=783;FS=6.137;HRun=2;HaplotypeScore=73.8473;InbreedingCoeff=0.9984;MQ=82.36;MQ0=0;MQRankSum=-4.583;QD=37.75;ReadPosRankSum=1.890;VQSLOD=4.3757;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,28:28:84.28:1210,84,0	0/0:9,0:9:24.07:0,24,297	0/0:19,0:19:48.06:0,48,507	0/0:23,0:23:54.54:0,55,591	1/1:1,25:26:66.22:951,66,0	0/0:48,0:48:99:0,138,1670	0/0:21,0:21:63.20:0,63,781	0/0:45,0:45:99:0,114,1404	0/0:36,0:36:99:0,99,1226	0/0:39,0:39:99:0,117,1435	0/0:16,0:16:39.12:0,39,484	0/0:31,0:31:90.27:0,90,1103	0/0:41,0:41:99:0,114,1412	0/0:29,0:29:87.25:0,87,1062	0/0:31,0:31:78.23:0,78,954	0/0:25,0:25:72.23:0,72,892	0/0:26,0:26:72.23:0,72,892	0/0:9,0:9:27.07:0,27,324	0/0:21,0:21:57.17:0,57,697	0/0:25,0:25:69.20:0,69,843	0/0:41,0:41:99:0,114,1396	0/0:25,0:25:72.23:0,72,892	0/0:28,0:28:81.24:0,81,989	0/0:22,0:22:63.20:0,63,781	0/0:33,0:33:96.27:0,96,1174	0/0:34,0:34:99:0,99,1216	0/0:36,0:36:99:0,105,1285	0/0:16,0:16:45.14:0,45,558
chr10	69716373	.	CAT	C	446.76	PASS	AB=0.692;AC=5;AF=0.089;AN=56;BaseQRankSum=7.776;DP=618;FS=4.179;HRun=0;HaplotypeScore=145.9765;InbreedingCoeff=0.6169;MQ=47.72;MQ0=24;MQRankSum=-3.205;QD=6.04;ReadPosRankSum=-1.152;VQSLOD=3.2493;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:26:23.03:0,23,150	0/0:12,0:12:36.12:0,36,605	0/0:13,0:2:6.02:0,6,96	0/0:20,0:2:5.99:0,6,62	0/0:24,0:24:33.44:0,33,198	0/0:28,0:28:78.17:0,78,1187	0/0:32,0:31:84.26:0,84,1368	0/0:39,0:32:83.86:0,84,664	0/0:20,0:20:48.10:0,48,700	0/0:18,0:18:45.74:0,46,823	0/0:18,0:18:38.92:0,39,629	0/0:25,0:25:61.99:0,62,949	0/0:19,0:17:36.01:0,36,489	0/0:22,0:22:63.13:0,63,988	0/0:17,0:17:40.65:0,41,650	0/0:20,0:20:56.96:0,57,916	1/1:10,16:25:13.39:161,13,0	0/1:10,8:17:40.08:56,0,40	0/0:12,0:11:15.99:0,16,131	0/0:18,0:18:14.89:0,15,136	0/0:30,0:27:14.24:0,14,128	0/0:30,0:29:84.28:0,84,1410	1/1:18,12:28:38.99:355,39,0	0/0:16,5:21:1.82:0,2,6	0/0:29,0:29:52.76:0,53,1267	0/0:14,0:12:32.87:0,33,350	0/0:26,0:25:5.98:0,6,247	0/0:10,0:10:11.73:0,12,141
chr10	69716377	.	C	CAT	1724.67	PASS	AB=0.893;AC=15;AF=0.268;AN=56;BaseQRankSum=11.032;DP=628;FS=13.948;HRun=0;HaplotypeScore=148.0452;InbreedingCoeff=0.1899;MQ=47.97;MQ0=24;MQRankSum=-8.520;QD=6.25;ReadPosRankSum=-0.915;VQSLOD=2.3955;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:24:25.15:229,25,0	0/0:12,0:12:36.12:0,36,542	0/0:12,0:2:6.01:0,6,72	0/0:14,0:1:3.01:0,3,35	0/1:28,0:28:11.94:158,0,12	0/0:27,0:27:78.11:0,78,1022	0/0:32,0:31:84.15:0,84,1156	0/1:42,0:35:96.03:96,0,466	0/0:23,0:23:48.09:0,48,655	0/0:23,0:23:65.90:0,66,846	0/0:18,0:18:40.41:0,40,517	0/0:25,0:25:42.95:0,43,837	0/0:19,0:17:25.30:0,25,331	0/0:23,0:23:63.13:0,63,865	0/0:18,0:18:37.96:0,38,554	0/0:21,0:21:49.57:0,50,745	0/1:24,0:23:17.99:117,0,18	0/1:20,0:19:31.95:32,0,65	0/1:12,0:10:59.26:60,0,59	0/1:16,2:18:12.91:121,0,13	0/1:10,17:26:8.70:90,0,9	0/0:34,0:32:95.68:0,96,1233	1/1:30,0:29:9.92:263,10,0	0/0:19,0:19:1.81:0,2,6	0/0:32,0:32:73.67:0,74,1238	0/1:11,1:10:59.27:102,0,59	1/1:22,3:24:46.54:478,47,0	0/1:4,7:10:3.99:150,0,4
chr10	69716385	.	AAC	A	662.70	PASS	AB=0.942;AC=23;AF=0.442;AN=52;BaseQRankSum=4.421;DP=598;FS=0.579;HRun=0;HaplotypeScore=140.7295;InbreedingCoeff=-0.3231;MQ=47.92;MQ0=26;MQRankSum=-0.874;QD=1.50;ReadPosRankSum=-1.900;VQSLOD=1.8524;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:23:1.51:0,2,5	0/1:11,3:14:89.39:89,0,238	./.	./.	0/0:28,0:29:3.72:0,4,40	0/1:23,2:24:57.68:58,0,426	0/1:32,1:32:28.55:29,0,410	0/0:35,0:28:12.61:0,13,81	0/1:20,4:24:5.29:5,0,330	0/1:22,1:23:0.18:0,0,385	0/1:17,1:19:20.78:21,0,235	0/1:22,3:25:83.72:84,0,415	1/1:9,6:14:14.07:139,14,0	0/0:19,0:19:7.12:0,7,377	0/1:14,3:18:6.17:6,0,315	0/1:18,2:20:68.86:69,0,263	0/1:25,0:24:20.39:20,0,138	0/1:19,0:18:14.40:14,0,39	1/1:7,0:4:2.98:24,3,0	0/0:16,0:16:4.01:0,4,19	0/1:23,0:20:3.69:4,0,11	0/1:29,2:30:29.46:29,0,534	0/1:31,0:30:4.46:106,0,4	1/1:20,0:20:5.68:31,6,0	0/1:33,1:34:0.42:0,0,762	0/0:10,0:8:1.26:0,1,69	0/1:24,0:22:42.72:67,0,43	0/1:10,0:9:6.39:6,0,59
chr10	69717570	.	AACAC	A	1829.34	PASS	AB=0.831;AC=13;AF=0.241;AN=54;BaseQRankSum=5.553;DP=705;FS=5.725;HRun=0;HaplotypeScore=128.8573;InbreedingCoeff=0.4457;MQ=66.91;MQ0=13;MQRankSum=0.689;QD=8.67;ReadPosRankSum=-0.247;VQSLOD=2.3909;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:29,0:30:29.54:0,30,488	0/0:10,0:10:6.02:0,6,116	0/0:31,0:14:3.01:0,3,43	0/0:40,0:23:3.01:0,3,40	0/0:13,0:20:27.09:0,27,500	0/1:15,1:18:11.28:11,0,602	0/1:28,2:30:64.20:64,0,400	./.	0/0:15,0:19:38.32:0,38,687	0/0:29,0:29:27.09:0,27,507	0/0:14,0:14:20.94:0,21,442	0/0:29,0:31:41.59:0,42,803	0/0:24,0:25:35.84:0,36,740	0/0:24,0:23:18.53:0,19,399	0/0:30,0:32:53.65:0,54,1116	0/0:22,0:23:38.87:0,39,813	0/0:23,0:27:50.11:0,50,921	0/0:25,0:27:44.68:0,45,766	1/1:14,3:16:15:187,15,0	1/1:5,7:13:18.01:264,18,0	0/1:36,19:56:6.38:485,0,6	0/0:19,0:20:23.71:0,24,362	0/0:17,0:15:18.06:0,18,395	0/0:28,1:35:17.62:0,18,969	0/1:21,0:21:11.26:11,0,629	0/1:11,11:22:38.10:410,0,38	1/1:10,11:21:24.08:377,24,0	1/1:5,6:11:12.04:189,12,0
chr10	69719186	.	CT	C	3182.91	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=10.136;DP=704;FS=0.000;HRun=2;HaplotypeScore=68.0913;InbreedingCoeff=0.9967;MQ=76.40;MQ0=0;MQRankSum=-2.768;QD=33.16;ReadPosRankSum=2.094;VQSLOD=3.7673;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,129,1914	0/0:9,0:9:27.06:0,27,380	0/0:14,0:14:23.14:0,23,479	0/0:15,0:15:36:0,36,478	0/0:27,0:27:78.24:0,78,1114	0/0:23,0:23:69.23:0,69,1034	0/0:28,0:28:84.28:0,84,1240	0/0:34,0:34:90.28:0,90,1295	0/0:31,0:31:93.30:0,93,1374	0/0:37,0:36:99:0,105,1541	0/0:18,0:18:54.18:0,54,809	0/0:26,0:26:78.25:0,78,1147	0/0:22,0:22:63.20:0,63,925	0/0:28,0:28:84.28:0,84,1259	0/0:24,0:24:72.24:0,72,1079	0/0:28,0:28:84.27:0,84,1239	1/1:0,19:20:54.17:695,54,0	1/1:0,25:25:69.22:895,69,0	0/0:22,0:22:66.21:0,66,954	0/0:28,0:28:81.26:0,81,1195	0/0:29,0:29:87.29:0,87,1300	0/0:33,0:33:93.30:0,93,1356	1/1:1,15:16:39.13:506,39,0	1/1:1,34:35:96.31:1246,96,0	0/0:23,0:23:69.22:0,69,1005	0/0:24,0:24:72.24:0,72,1060	0/0:35,0:34:99:0,99,1455	0/0:6,0:6:18.06:0,18,270
chr10	69719453	.	T	TGGG	791.36	PASS	AC=6;AF=0.107;AN=56;BaseQRankSum=4.045;DP=644;FS=0.000;HRun=9;HaplotypeScore=118.2058;InbreedingCoeff=0.9929;MQ=77.36;MQ0=0;MQRankSum=-2.627;QD=10.69;ReadPosRankSum=-4.252;VQSLOD=-0.6542;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:11,0:40:43.03:327,43,0	0/0:13,0:13:30.05:0,30,378	0/0:34,0:30:32.02:0,32,596	0/0:25,0:24:44.93:0,45,521	1/1:12,3:20:25.76:365,26,0	0/0:28,0:28:72.19:0,72,890	0/0:14,0:15:34.63:0,35,438	1/1:13,1:14:14.84:239,15,0	0/0:25,0:25:60.16:0,60,758	0/0:32,0:32:72.16:0,72,895	0/0:16,0:16:45.14:0,45,568	0/0:19,0:19:42.11:0,42,528	0/0:26,0:27:32.96:0,33,679	0/0:17,0:17:48.13:0,48,593	0/0:21,0:20:60.18:0,60,745	0/0:25,0:25:57.16:0,57,720	0/0:18,0:18:33.07:0,33,215	0/0:20,0:20:52.48:0,52,296	0/0:18,0:18:36.08:0,36,443	0/0:21,0:21:49.68:0,50,609	0/0:28,0:28:66.15:0,66,834	0/0:22,0:22:51.13:0,51,643	0/0:20,0:20:54.56:0,55,293	0/0:23,0:23:47.69:0,48,278	0/0:29,0:29:84.24:0,84,1034	0/0:24,0:24:66.18:0,66,829	0/0:32,0:32:78.16:0,78,956	0/0:17,0:17:51.16:0,51,644
chr10	69719454	.	G	GT	2686.82	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=10.724;DP=635;FS=21.242;HRun=3;HaplotypeScore=82.3988;InbreedingCoeff=0.9976;MQ=78.18;MQ0=0;MQRankSum=-1.102;QD=31.61;ReadPosRankSum=3.463;VQSLOD=1.9538;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:36,0:36:53.46:0,53,320	0/0:13,0:13:39.08:0,39,491	0/0:35,0:30:64.98:0,65,777	0/0:25,0:24:62.80:0,63,699	0/0:17,0:17:22.94:0,23,174	0/0:29,0:29:84.24:0,84,1085	0/0:15,0:15:37.96:0,38,546	0/0:12,0:12:19.48:0,19,112	0/0:25,0:25:72.19:0,72,936	0/0:33,0:33:93.26:0,93,1195	0/0:16,0:16:45.15:0,45,626	0/0:17,0:17:51.14:0,51,663	0/0:25,0:25:59.96:0,60,895	0/0:17,0:17:50.95:0,51,665	0/0:21,0:20:60.20:0,60,827	0/0:24,0:24:72.20:0,72,927	1/1:5,13:19:49.37:616,49,0	1/1:1,20:21:54.18:717,54,0	0/0:17,0:17:51.12:0,51,624	0/0:20,0:20:56.21:0,56,724	0/0:27,0:27:78.19:0,78,1016	0/0:21,0:21:60.16:0,60,781	1/1:0,21:22:57.19:763,57,0	1/1:0,22:23:57.18:751,57,0	0/0:31,0:31:87.27:0,87,1168	0/0:24,0:24:72.18:0,72,946	0/0:32,0:32:96.24:0,96,1218	0/0:18,0:18:51.17:0,51,709
chr10	69719840	.	CGGAA	C	2753.97	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.877;DP=735;FS=0.545;HRun=0;HaplotypeScore=133.0198;InbreedingCoeff=0.9983;MQ=92.19;MQ0=0;MQRankSum=-5.386;QD=43.71;ReadPosRankSum=0.836;VQSLOD=4.2548;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,46:46:99:2240,108,0	0/0:13,0:13:39.13:0,39,1092	0/0:23,0:24:72.21:0,72,1838	0/0:38,0:38:97.81:0,98,2414	1/1:0,17:17:33.11:636,33,0	0/0:20,0:20:60.21:0,60,1662	0/0:27,0:27:81.27:0,81,2258	0/0:28,0:28:84.29:0,84,2333	0/0:28,0:28:84.26:0,84,2224	0/0:25,0:25:75.26:0,75,2104	0/0:9,0:9:24.08:0,24,663	0/0:36,0:36:99:0,108,2897	0/0:24,0:24:72.20:0,72,1919	0/0:30,0:30:90.31:0,90,2423	0/0:32,0:32:96.25:0,96,2532	0/0:21,0:21:63.22:0,63,1825	0/0:25,0:25:75.21:0,75,1463	0/0:20,0:20:57.11:0,57,1079	0/0:29,0:29:87.28:0,87,2334	0/0:15,0:15:45.14:0,45,1238	0/0:49,0:49:99:0,144,3959	0/0:19,0:19:57.16:0,57,1507	0/0:24,0:24:69.24:0,69,1396	0/0:43,0:43:99:0,123,2308	0/0:34,0:33:99:0,102,2826	0/0:30,0:30:90.31:0,90,2601	0/0:20,0:19:60.21:0,60,1736	0/0:9,0:9:27.09:0,27,782
chr10	69720421	.	T	TA	674.35	PASS	AB=1.000;AC=3;AF=0.054;AN=56;BaseQRankSum=-4.832;DP=506;FS=2.370;HRun=10;HaplotypeScore=55.9925;InbreedingCoeff=0.6776;MQ=74.05;MQ0=1;MQRankSum=0.912;QD=15.68;ReadPosRankSum=-6.236;VQSLOD=2.1467;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:41.19:0,41,347	0/0:11,0:11:20.83:0,21,161	0/0:14,0:12:11.27:0,11,115	0/1:10,0:9:4.62:5,0,40	0/0:26,0:26:56.90:0,57,465	0/0:19,0:20:50.43:0,50,403	0/0:13,0:14:35:0,35,277	1/1:7,25:33:77.72:768,78,0	0/0:20,0:20:47.88:0,48,388	0/0:23,0:23:53.88:0,54,438	0/0:17,0:17:21.11:0,21,277	0/0:12,0:12:29.95:0,30,246	0/0:14,0:14:35.94:0,36,296	0/0:14,0:14:32.94:0,33,268	0/0:14,0:14:32.91:0,33,265	0/0:15,0:16:43.98:0,44,351	0/0:20,0:20:53.83:0,54,428	0/0:23,0:23:59.86:0,60,484	0/0:14,0:14:35.94:0,36,294	0/0:24,0:25:60.99:0,61,480	0/0:8,0:8:14.91:0,15,123	0/0:15,0:16:37.97:0,38,301	0/0:24,0:24:41.88:0,42,345	0/0:15,0:16:18.62:0,19,275	0/0:19,0:19:44.90:0,45,369	0/0:26,0:26:65.91:0,66,541	0/0:22,0:21:50.91:0,51,419	0/0:9,0:9:23.97:0,24,197
chr10	69720483	.	CAAAA	C	2689.72	PASS	AB=1.000;AC=11;AF=0.196;AN=56;BaseQRankSum=4.011;DP=498;FS=4.191;HRun=16;HaplotypeScore=91.6916;InbreedingCoeff=0.9042;MQ=64.45;MQ0=0;MQRankSum=-2.978;QD=21.87;ReadPosRankSum=3.717;VQSLOD=2.9487;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:6,0:28:42.14:0,42,752	0/0:9,0:12:35.95:0,36,609	0/0:15,0:10:17.98:0,18,227	0/1:13,0:8:5.48:5,0,136	0/0:12,0:23:48.13:0,48,714	0/0:14,0:16:42.14:0,42,884	0/0:8,0:10:23.98:0,24,400	1/1:6,28:36:87.38:1007,87,0	0/0:17,0:20:54.18:0,54,965	0/0:16,0:18:51.17:0,51,923	0/0:21,0:24:72.14:0,72,1220	0/0:18,0:19:54.18:0,54,991	0/0:16,0:16:45.15:0,45,828	0/0:6,0:6:17.27:0,17,256	0/0:16,0:15:36.12:0,36,671	0/0:18,0:22:57.19:0,57,1089	1/1:5,15:20:32.95:433,33,0	1/1:3,18:22:51.04:655,51,0	0/0:7,0:13:36.10:0,36,441	0/0:10,0:25:67.90:0,68,816	0/0:3,0:9:24.08:0,24,309	0/0:20,0:20:45.15:0,45,830	1/1:5,10:15:29.90:394,30,0	1/1:6,11:17:29.83:371,30,0	0/0:22,0:25:57.18:0,57,1072	0/0:7,0:15:30.10:0,30,399	0/0:6,0:11:25.10:0,25,325	0/0:6,0:10:20.97:0,21,230
chr10	69720617	.	TC	T	4905.55	PASS	AB=0.527;AC=11;AF=0.196;AN=56;BaseQRankSum=9.326;DP=646;FS=0.357;HRun=2;HaplotypeScore=71.1166;InbreedingCoeff=0.8863;MQ=81.50;MQ0=0;MQRankSum=-2.068;QD=35.04;ReadPosRankSum=1.600;VQSLOD=5.3067;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:30,0:30:90.27:0,90,1305	0/0:11,0:11:30.10:0,30,450	0/0:15,0:15:42.14:0,42,619	0/0:20,0:20:30.26:0,30,602	0/0:21,0:21:54.18:0,54,805	0/0:13,0:13:39.12:0,39,564	0/0:30,0:30:84.28:0,84,1259	0/0:48,0:48:99:0,138,2039	0/0:27,0:27:81.19:0,81,1130	0/0:26,0:26:75.25:0,75,1114	0/0:22,0:22:63.20:0,63,913	0/0:20,0:20:60.19:0,60,879	0/0:28,0:28:81.27:0,81,1213	0/0:16,0:16:45.14:0,45,655	0/0:22,0:22:63.20:0,63,924	0/0:27,0:27:78.26:0,78,1168	0/0:28,0:28:81.26:0,81,1193	0/0:11,0:11:33.07:0,33,467	1/1:0,19:19:57.17:723,57,0	1/1:0,16:16:33.11:428,33,0	1/1:0,38:38:99:1402,108,0	0/0:29,0:29:87.28:0,87,1283	0/0:17,0:17:51.17:0,51,762	0/0:31,0:31:90.30:0,90,1349	0/0:14,0:14:39.13:0,39,585	0/1:3,26:29:47.68:912,0,48	1/1:0,28:28:84.27:1090,84,0	1/1:0,10:10:27.09:350,27,0
chr10	69720833	.	GAGAGAGAGAGGC	G	1597.08	PASS	AB=0.848;AC=9;AF=0.161;AN=56;BaseQRankSum=6.060;DP=742;FS=2.726;HRun=0;HaplotypeScore=250.5891;InbreedingCoeff=0.5634;MQ=70.88;MQ0=8;MQRankSum=-6.084;QD=10.72;ReadPosRankSum=0.448;VQSLOD=2.2368;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:46,0:46:99:121,0,2085	0/0:8,0:8:24.08:0,24,1270	0/0:55,0:38:31.05:0,31,1417	0/0:75,0:44:32.80:0,33,1026	0/1:20,0:20:91.16:91,0,471	0/0:21,0:21:42.14:0,42,2058	0/0:24,0:24:60.16:0,60,2725	0/0:21,0:20:57.19:0,57,1792	0/0:21,0:21:51.16:0,51,2537	0/0:25,0:24:72.17:0,72,3399	0/0:15,0:15:36.12:0,36,1707	0/0:20,0:20:54.14:0,54,2685	0/0:28,0:28:69.24:0,69,3552	0/0:21,0:21:45.15:0,45,2219	0/0:24,0:24:60.20:0,60,2816	0/0:29,0:29:69.21:0,69,3074	1/1:13,18:31:9.03:325,9,0	0/1:3,15:18:12.71:521,0,13	0/0:19,0:19:48.15:0,48,1910	0/0:14,0:14:36.11:0,36,1546	0/0:44,0:44:99:0,101,4742	0/0:30,0:30:75.24:0,75,3075	1/1:5,9:14:9.50:254,10,0	1/1:8,12:20:11.57:433,12,0	0/0:20,0:20:48.16:0,48,2258	0/0:34,0:34:81.27:0,81,3361	0/0:27,0:27:75.26:0,75,3422	0/0:15,0:14:39.08:0,39,1191
chr10	69720843	.	GGC	G	239.04	PASS	AB=0.974;AC=8;AF=0.143;AN=56;BaseQRankSum=9.121;DP=709;FS=0.632;HRun=0;HaplotypeScore=122.3692;InbreedingCoeff=0.3623;MQ=68.44;MQ0=7;MQRankSum=-4.085;QD=1.41;ReadPosRankSum=-0.956;VQSLOD=1.9721;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:39,3:42:15.62:0,16,1017	0/0:9,0:9:27.09:0,27,507	0/0:52,2:32:12.71:0,13,875	0/1:83,5:49:96.24:96,0,546	0/1:18,1:19:44.03:44,0,166	0/0:20,0:20:54.18:0,54,1019	0/0:23,0:23:53.11:0,53,1030	0/0:25,0:24:67.47:0,67,1153	0/0:18,0:18:54.17:0,54,1005	0/0:28,0:27:81.16:0,81,1483	0/0:13,0:13:38.85:0,39,671	0/0:18,0:18:53.93:0,54,972	0/0:24,0:24:68.89:0,69,1257	0/0:18,0:18:50.75:0,51,880	0/0:24,1:25:71.06:0,71,1255	0/0:26,0:26:74.99:0,75,1299	1/1:18,0:18:8.71:49,9,0	0/1:17,0:17:32.72:62,0,33	0/0:20,0:20:52.64:0,53,820	0/0:15,0:15:39.12:0,39,680	0/0:42,0:42:99:0,108,1913	0/0:30,0:30:84.01:0,84,1441	1/1:11,0:11:8.93:75,9,0	0/1:16,0:16:22.74:52,0,23	0/0:19,0:19:47.35:0,47,875	0/0:30,0:30:86.92:0,87,1541	0/0:26,0:26:78.27:0,78,1456	0/0:15,0:14:42.08:0,42,618
chr10	69722259	.	C	CA	782.19	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=2.815;DP=367;FS=29.947;HRun=0;HaplotypeScore=55.9001;InbreedingCoeff=0.7640;MQ=94.35;MQ0=0;MQRankSum=-1.899;QD=7.59;ReadPosRankSum=-6.660;VQSLOD=0.6001;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:1,16:17:2.99:24,3,0	0/0:2,0:2:5.98:0,6,62	0/0:17,0:16:48.12:0,48,620	0/0:29,0:30:45.66:0,46,934	1/1:0,5:5:2.94:18,3,0	0/0:17,0:17:45.11:0,45,603	0/0:25,0:25:72.23:0,72,983	0/1:17,0:17:26.65:27,0,30	0/0:15,0:15:42.14:0,42,582	0/0:6,0:6:18.03:0,18,230	0/0:12,0:12:32.76:0,33,357	0/0:12,0:11:27.09:0,27,373	0/0:12,0:12:29.97:0,30,370	0/0:7,0:7:18.06:0,18,251	0/0:8,0:8:15.05:0,15,209	0/0:9,0:9:23.90:0,24,285	1/1:21,1:23:15.14:245,15,0	1/1:16,2:19:32.72:348,33,0	0/0:20,0:20:54.05:0,54,684	0/0:4,0:4:6.02:0,6,83	0/0:20,0:20:45.09:0,45,588	0/0:7,0:7:18.06:0,18,250	1/1:6,0:6:17.95:143,18,0	1/1:16,0:16:18.29:151,18,0	0/0:7,0:7:17.97:0,18,207	0/0:20,0:19:53.80:0,54,633	0/0:11,0:11:33.08:0,33,436	0/0:3,0:3:9.03:0,9,123
chr10	69722264	.	G	GGT	693.22	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=3.530;DP=345;FS=3.039;HRun=0;HaplotypeScore=57.5275;InbreedingCoeff=0.5707;MQ=98.22;MQ0=0;MQRankSum=-1.808;QD=33.01;ReadPosRankSum=-3.496;VQSLOD=4.2395;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:13,0:13:23.65:0,24,154	0/0:2,0:2:3.01:0,3,47	0/0:17,0:16:39.51:0,40,543	0/0:33,0:33:77.52:0,78,1052	0/0:4,0:4:2.88:0,3,15	0/0:18,0:18:51.14:0,51,733	0/0:28,0:28:84.23:0,84,1222	1/1:0,19:21:56.86:787,57,0	0/0:15,0:15:45.14:0,45,683	0/0:8,0:8:18.05:0,18,259	0/0:10,0:10:24.06:0,24,344	0/0:14,0:13:39.02:0,39,508	0/0:11,0:11:24.08:0,24,375	0/0:8,0:8:24.06:0,24,332	0/0:6,0:6:15.05:0,15,234	0/0:7,0:7:21.06:0,21,306	0/0:15,0:17:20.14:0,20,142	0/0:17,0:17:23.44:0,23,233	0/0:18,0:18:51.14:0,51,732	0/0:3,0:3:9.02:0,9,121	0/0:18,0:18:54.09:0,54,729	0/0:7,0:7:18.06:0,18,281	0/0:2,0:2:2.96:0,3,19	0/0:12,0:12:22.38:0,22,157	0/0:5,0:5:12.04:0,12,188	0/0:16,0:15:42.13:0,42,633	0/0:12,0:12:36.10:0,36,525	0/0:3,0:3:9.03:0,9,135
chr10	69722391	.	TACACACACACACACACAC	T	2429.62	PASS	AB=0.714;AC=11;AF=0.204;AN=54;BaseQRankSum=4.663;DP=594;FS=0.000;HRun=0;HaplotypeScore=251.8025;InbreedingCoeff=0.7192;MQ=69.36;MQ0=14;MQRankSum=-1.603;QD=17.61;ReadPosRankSum=-0.577;VQSLOD=2.0522;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:24:33.11:0,33,1216	0/0:5,0:5:6.02:0,6,446	./.	0/0:53,0:34:3.01:0,3,68	0/0:3,0:8:9.03:0,9,400	0/0:18,0:18:34.36:0,34,2246	0/0:32,0:34:42.11:0,42,2312	0/0:21,0:21:6.02:0,6,211	0/0:25,0:25:36.11:0,36,1889	0/0:21,0:21:30.10:0,30,1962	0/0:13,0:16:24.08:0,24,1363	0/0:21,0:21:42.13:0,42,2413	0/0:9,0:9:18.03:0,18,1129	0/0:22,0:22:24.04:0,24,1312	0/0:18,0:18:18.04:0,18,1204	0/0:18,0:18:9.03:0,9,609	0/0:17,0:25:37.35:0,37,1625	0/0:11,0:11:21.04:0,21,855	1/1:11,3:14:9.50:437,10,0	1/1:7,7:14:12.04:394,12,0	1/1:55,0:53:26.45:284,26,0	0/0:15,0:14:24.07:0,24,1297	0/0:7,0:10:7.99:0,8,323	0/0:18,0:20:24.04:0,24,873	0/0:13,0:13:17.76:0,18,1006	0/1:12,7:20:99:604,0,377	1/1:13,7:20:12.51:582,13,0	1/1:9,6:15:6.02:291,6,0
chr10	69723206	.	CCCCACACAGGCAG	C	1665.95	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.302;DP=756;FS=7.555;HRun=0;HaplotypeScore=268.1088;InbreedingCoeff=0.9841;MQ=82.86;MQ0=0;MQRankSum=-6.630;QD=64.07;ReadPosRankSum=-0.376;VQSLOD=1.6671;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:50,0:50:99:0,144,9030	0/0:12,0:12:36.12:0,36,2383	0/0:24,0:24:72.03:0,72,3804	0/0:25,0:25:66.23:0,66,3610	0/0:19,0:19:57.20:0,57,3351	0/0:32,0:32:90.31:0,90,5873	0/0:25,0:25:75.26:0,75,4711	1/1:11,15:26:45.15:1761,45,0	0/0:20,0:20:60.16:0,60,3422	0/0:31,0:31:90.31:0,90,5388	0/0:16,0:16:45.15:0,45,2735	0/0:35,0:35:99:0,105,6689	0/0:24,0:24:69.24:0,69,4317	0/0:25,0:25:75.23:0,75,4397	0/0:26,0:26:78.25:0,78,4864	0/0:20,0:20:60.21:0,60,3851	0/0:38,0:38:99:0,108,7000	0/0:37,0:37:99:0,111,6788	0/0:29,0:29:84.29:0,84,5166	0/0:25,0:25:69.19:0,69,3958	0/0:64,0:64:99:0,193,12114	0/0:11,0:11:33.11:0,33,1998	0/0:19,0:19:57.20:0,57,3450	0/0:49,0:48:99:0,147,9186	0/0:24,0:24:69.24:0,69,4163	0/0:28,0:28:84.29:0,84,5474	0/0:17,0:17:48.16:0,48,2984	0/0:5,0:5:15.05:0,15,941
chr10	69724564	.	GT	G	2687.86	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=13.205;DP=592;FS=2.861;HRun=12;HaplotypeScore=79.4222;InbreedingCoeff=0.9906;MQ=75.87;MQ0=1;MQRankSum=2.986;QD=9.24;ReadPosRankSum=0.413;VQSLOD=3.0676;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,0:22:36.67:108,37,0	0/0:12,0:12:29.98:0,30,282	0/0:15,0:13:13.23:0,13,106	0/0:15,0:13:14.63:0,15,98	1/1:2,0:26:31.84:110,32,0	0/0:24,2:28:22.32:0,22,555	0/0:22,1:23:33.82:0,34,508	1/1:6,0:30:37.77:123,38,0	0/0:23,0:23:63.10:0,63,627	0/0:27,0:27:54.07:0,54,530	0/0:24,0:25:53.92:0,54,520	0/0:17,0:17:36.06:0,36,360	0/0:14,0:16:38.91:0,39,379	0/0:17,0:17:42.03:0,42,415	0/0:16,0:17:38.24:0,38,420	0/0:18,1:21:34.41:0,34,484	1/1:4,0:28:44.80:130,45,0	1/1:2,0:15:26.48:77,26,0	1/1:1,14:15:16.30:276,16,0	1/1:2,23:27:39.07:453,39,0	1/1:0,13:13:26.90:209,27,0	0/0:21,1:22:39.86:0,40,569	1/1:3,1:26:39.44:129,39,0	1/1:2,0:15:18.33:53,18,0	0/0:22,1:23:39.87:0,40,575	1/1:5,20:27:36.35:444,36,0	1/1:5,25:31:67.76:517,68,0	1/1:2,14:16:38.69:292,39,0
chr10	69726319	.	C	CTCCTCCTCCTCT	5064.68	PASS	AB=0.975;AC=27;AF=0.482;AN=56;BaseQRankSum=4.601;DP=380;FS=85.331;HRun=0;HaplotypeScore=155.1073;InbreedingCoeff=-0.6512;MQ=63.18;MQ0=3;MQRankSum=-7.844;QD=15.44;ReadPosRankSum=7.815;VQSLOD=0.1038;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:24,0:24:76.74:77,0,346	1/1:2,0:2:3.01:116,3,0	0/0:23,0:17:12.98:0,13,129	0/1:20,0:15:70.74:71,0,140	0/0:13,0:13:6.83:0,7,69	0/1:9,4:14:5.37:486,0,5	1/1:26,1:27:19.47:798,19,0	0/1:16,0:15:99:243,0,140	0/1:5,4:9:16.40:216,0,16	0/1:22,0:22:31.60:440,0,32	0/1:12,0:11:59.59:60,0,63	0/1:16,0:16:23.66:146,0,24	0/1:8,0:8:23.57:47,0,24	0/1:12,0:12:22.26:137,0,22	0/1:11,0:11:41.83:333,0,42	0/1:13,0:13:80.60:193,0,81	0/1:12,0:12:94.40:262,0,94	0/1:9,0:9:45.43:71,0,45	0/1:15,0:15:93.34:93,0,134	0/1:12,0:12:90.32:90,0,129	0/1:18,0:18:99:154,0,109	0/1:14,0:14:53.99:276,0,54	0/1:6,0:6:20.20:20,0,78	0/1:11,0:11:13.09:13,0,61	0/1:10,0:10:8.73:207,0,9	0/1:11,0:11:95.37:364,0,95	0/0:15,0:15:23.92:0,24,193	0/1:4,0:4:14.96:151,0,15
chr10	69726576	.	TTCA	T	805.95	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.241;DP=605;FS=37.225;HRun=0;HaplotypeScore=81.9488;InbreedingCoeff=0.9914;MQ=89.02;MQ0=0;MQRankSum=-2.524;QD=47.41;ReadPosRankSum=-3.191;VQSLOD=1.8673;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:81.28:0,81,1996	0/0:6,0:6:18.06:0,18,444	0/0:22,0:22:66.23:0,66,1528	0/0:23,0:23:69.23:0,69,1602	0/0:18,0:18:54.17:0,54,1211	0/0:30,0:30:90.31:0,90,2174	0/0:23,0:23:69.24:0,69,1684	1/1:0,17:17:51.15:901,51,0	0/0:21,0:21:63.22:0,63,1553	0/0:28,0:28:84.29:0,84,2069	0/0:17,0:17:48.16:0,48,1158	0/0:25,0:25:75.24:0,75,1774	0/0:18,0:18:54.19:0,54,1331	0/0:25,0:25:75.26:0,75,1826	0/0:31,0:31:93.32:0,93,2289	0/0:14,0:14:42.14:0,42,1035	0/0:33,0:33:99:0,99,2390	0/0:19,0:19:57.20:0,57,1371	0/0:21,0:21:63.22:0,63,1540	0/0:16,0:16:48.16:0,48,1161	0/0:25,0:25:72.25:0,72,1772	0/0:17,0:17:51.18:0,51,1257	0/0:12,0:12:36.12:0,36,887	0/0:31,0:31:93.31:0,93,2239	0/0:18,0:18:54.19:0,54,1331	0/0:24,0:24:72.20:0,72,1694	0/0:34,0:33:99:0,102,2487	0/0:10,0:10:30.10:0,30,723
chr10	69727359	.	G	GTT	793.55	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-4.394;DP=684;FS=1.603;HRun=9;HaplotypeScore=83.4901;InbreedingCoeff=0.9682;MQ=81.39;MQ0=0;MQRankSum=1.268;QD=28.34;ReadPosRankSum=-5.134;VQSLOD=2.7183;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:53,0:53:99:0,118,1398	0/0:15,0:15:36.08:0,36,383	0/0:24,0:23:52.44:0,52,555	0/0:23,0:24:29.10:0,29,379	0/0:23,0:23:60.12:0,60,623	0/0:21,0:21:45.09:0,45,479	0/0:14,0:14:33.05:0,33,343	1/1:5,23:28:63.16:888,63,0	0/0:30,0:30:78.17:0,78,830	0/0:31,0:31:90.22:0,90,958	0/0:22,0:22:60.14:0,60,638	0/0:29,0:29:75.11:0,75,782	0/0:23,0:24:53.95:0,54,621	0/0:25,0:25:30.26:0,30,655	0/0:32,0:32:93.23:0,93,990	0/0:32,0:32:93.23:0,93,990	0/0:28,0:28:75.16:0,75,798	0/0:28,0:30:86.87:0,87,874	0/0:17,0:17:36.04:0,36,381	0/0:20,0:20:54.12:0,54,567	0/0:14,0:14:33.08:0,33,351	0/0:20,0:20:54.10:0,54,567	0/0:18,0:18:48.11:0,48,510	0/0:27,0:27:63.11:0,63,670	0/0:19,0:19:48.07:0,48,503	0/0:24,0:24:60.13:0,60,639	0/0:32,0:32:78.10:0,78,813	0/0:7,0:7:12:0,12,119
chr10	69727994	.	G	GA	1324.90	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=-9.414;DP=722;FS=1.300;HRun=6;HaplotypeScore=67.3040;InbreedingCoeff=0.9990;MQ=87.21;MQ0=0;MQRankSum=-2.858;QD=30.11;ReadPosRankSum=-5.054;VQSLOD=1.8849;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:28:81.18:0,81,826	0/0:10,0:10:30.07:0,30,306	0/0:29,0:29:69.13:0,69,696	0/0:20,0:20:41.49:0,41,388	0/0:25,0:25:66.15:0,66,673	0/0:31,0:31:90.20:0,90,918	0/0:28,0:28:81.15:0,81,811	1/1:6,38:44:99:1420,114,0	0/0:27,0:27:75.14:0,75,757	0/0:32,0:32:90.19:0,90,912	0/0:14,0:14:42.10:0,42,429	0/0:39,0:39:99:0,111,1132	0/0:29,0:29:72.15:0,72,734	0/0:27,0:27:72.04:0,72,770	0/0:30,0:30:78.17:0,78,795	0/0:26,0:26:72.16:0,72,735	0/0:26,0:26:78.18:0,78,796	0/0:27,0:27:72.16:0,72,734	0/0:25,0:25:66.14:0,66,669	0/0:26,0:26:69.14:0,69,697	0/0:36,0:36:90.20:0,90,918	0/0:15,0:15:36.08:0,36,367	0/0:18,0:18:54.11:0,54,544	0/0:21,0:21:57.13:0,57,582	0/0:27,0:27:69.15:0,69,704	0/0:30,0:30:75.17:0,75,765	0/0:21,0:21:63.14:0,63,643	0/0:11,0:11:33.08:0,33,337
chr10	69730542	.	T	TG	10353.38	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-11.896;DP=565;FS=0.311;HRun=2;HaplotypeScore=51.8769;InbreedingCoeff=0.9979;MQ=85.11;MQ0=0;MQRankSum=-4.224;QD=39.67;ReadPosRankSum=2.312;VQSLOD=5.1071;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,19:20:48.16:691,48,0	0/0:7,0:7:21.07:0,21,260	0/0:19,0:19:54.16:0,54,656	0/0:22,0:22:60.19:0,60,733	1/1:0,23:23:66.22:950,66,0	0/0:25,0:25:75.24:0,75,929	0/0:24,0:24:69.20:0,69,841	1/1:2,24:26:72.21:994,72,0	0/0:16,0:16:45.13:0,45,544	0/0:19,0:19:54.13:0,54,643	0/0:25,0:25:72.21:0,72,880	0/0:17,0:17:51.13:0,51,607	0/0:23,0:23:69.20:0,69,841	0/0:19,0:19:57.17:0,57,693	0/0:21,0:21:63.18:0,63,767	0/0:19,0:19:51.16:0,51,632	1/1:0,32:32:93.31:1339,93,0	1/1:0,25:25:72.24:1037,72,0	1/1:1,18:19:54.15:755,54,0	1/1:0,20:20:57.19:820,57,0	1/1:1,15:16:42.14:605,42,0	0/0:25,0:25:75.22:0,75,917	1/1:0,19:19:57.19:820,57,0	1/1:0,10:10:30.10:432,30,0	0/0:23,0:23:66.21:0,66,818	1/1:2,17:19:16.96:678,17,0	1/1:1,19:20:51.15:714,51,0	1/1:0,12:12:36.12:518,36,0
chr10	69730614	.	CCTGT	C	1070.49	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.037;DP=498;FS=1.702;HRun=0;HaplotypeScore=101.3509;InbreedingCoeff=0.9855;MQ=80.95;MQ0=0;MQRankSum=-7.848;QD=44.60;ReadPosRankSum=1.071;VQSLOD=4.2030;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,6:6:16.61:279,17,0	0/0:6,0:6:18.06:0,18,506	0/0:15,0:15:42.12:0,42,1068	0/0:13,0:13:36.12:0,36,898	1/1:1,16:18:51.16:910,51,0	0/0:33,0:33:99:0,99,2701	0/0:22,0:22:66.23:0,66,1872	0/0:35,0:35:99:0,105,2913	0/0:16,0:16:48.16:0,48,1391	0/0:22,0:22:66.23:0,66,1906	0/0:18,0:18:54.19:0,54,1549	0/0:13,0:13:39.13:0,39,1130	0/0:18,0:18:54.19:0,54,1500	0/0:12,0:12:36.12:0,36,958	0/0:24,0:24:72.25:0,72,2043	0/0:22,0:22:66.23:0,66,1907	0/0:19,0:19:54.19:0,54,1510	0/0:19,0:19:54.19:0,54,1564	0/0:23,0:23:69.24:0,69,1999	0/0:16,0:16:48.16:0,48,1346	0/0:12,0:12:33.11:0,33,895	0/0:15,0:15:45.14:0,45,1240	0/0:16,0:16:48.16:0,48,1391	0/0:6,0:6:18.06:0,18,522	0/0:30,0:30:90.31:0,90,2589	0/0:22,0:22:66.23:0,66,1841	0/0:16,0:16:42.14:0,42,1216	0/0:11,0:11:33.11:0,33,940
chr10	69730620	.	CA	C	176.14	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.753;DP=496;FS=1.827;HRun=1;HaplotypeScore=71.7281;InbreedingCoeff=0.9808;MQ=80.36;MQ0=0;MQRankSum=-7.721;QD=7.66;ReadPosRankSum=1.926;VQSLOD=1.1053;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,6:6:13.78:69,14,0	0/0:7,0:7:21.06:0,21,313	0/0:15,0:15:42.13:0,42,632	0/0:12,0:12:24.08:0,24,377	1/1:1,16:17:45.07:225,45,0	0/0:31,0:31:93.30:0,93,1456	0/0:23,0:23:69.24:0,69,1097	0/0:39,0:39:99:0,117,1808	0/0:17,0:17:51.16:0,51,792	0/0:23,0:23:66.22:0,66,1055	0/0:18,0:18:54.17:0,54,841	0/0:13,0:13:39.13:0,39,624	0/0:19,0:19:57.18:0,57,885	0/0:11,0:11:33.11:0,33,524	0/0:22,0:22:66.23:0,66,1055	0/0:24,0:24:72.23:0,72,1123	0/0:19,0:19:54.18:0,54,855	0/0:18,0:18:51.16:0,51,789	0/0:21,0:21:63.19:0,63,953	0/0:16,0:16:48.16:0,48,767	0/0:11,0:11:27.09:0,27,429	0/0:13,0:13:39.13:0,39,623	0/0:17,0:17:51.17:0,51,813	0/0:6,0:6:18.06:0,18,287	0/0:29,0:29:87.28:0,87,1366	0/0:20,0:20:57.19:0,57,912	0/0:19,0:19:51.17:0,51,813	0/0:10,0:10:30.07:0,30,432
chr10	69730622	.	TGATATTAAAA	T	1617.82	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=8.188;DP=487;FS=2.864;HRun=0;HaplotypeScore=157.2402;InbreedingCoeff=0.9838;MQ=79.07;MQ0=0;MQRankSum=-7.528;QD=70.34;ReadPosRankSum=0.866;VQSLOD=3.7567;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:0,6:6:15.05:405,15,0	0/0:7,0:7:21.07:0,21,1005	0/0:13,0:13:36.12:0,36,1699	0/0:11,0:11:30.10:0,30,1267	1/1:1,16:17:50.91:1331,51,0	0/0:29,0:29:87.30:0,87,4529	0/0:22,0:22:66.23:0,66,3238	0/0:40,0:40:99:0,120,5905	0/0:16,0:16:48.16:0,48,2430	0/0:23,0:23:69.24:0,69,3573	0/0:20,0:20:60.21:0,60,3119	0/0:13,0:13:39.13:0,39,1901	0/0:20,0:20:60.21:0,60,3102	0/0:11,0:11:33.11:0,33,1768	0/0:22,0:22:66.23:0,66,3463	0/0:23,0:23:69.24:0,69,3765	0/0:18,0:18:45.85:0,46,2059	0/0:19,0:19:51.65:0,52,2193	0/0:17,0:17:51.18:0,51,2587	0/0:16,0:16:48.16:0,48,2627	0/0:11,0:11:30.10:0,30,1605	0/0:14,0:14:42.14:0,42,2045	0/0:18,0:18:54.18:0,54,2300	0/0:6,0:6:18.06:0,18,820	0/0:28,0:28:84.27:0,84,4353	0/0:20,0:20:60.21:0,60,3167	0/0:19,0:19:51.16:0,51,2634	0/0:8,0:8:24.08:0,24,1220
chr10	69731054	.	TTCTCTCTCTCTCTC	T	92.16	PASS	AB=0.975;AC=6;AF=0.143;AN=42;BaseQRankSum=2.197;DP=454;FS=0.000;HRun=0;HaplotypeScore=157.8915;InbreedingCoeff=0.1934;MQ=63.27;MQ0=10;MQRankSum=-0.369;QD=1.26;ReadPosRankSum=1.160;VQSLOD=2.5488;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:28:1.71:0,2,6	./.	./.	./.	./.	0/0:25,0:25:12.04:0,12,510	0/0:9,0:8:9.03:0,9,419	0/0:27,0:27:5.67:0,6,16	./.	0/0:14,0:14:15.05:0,15,522	0/0:16,0:15:9.50:0,10,361	0/0:15,0:15:12.04:0,12,575	0/0:13,0:13:9.02:0,9,264	0/0:10,0:10:6.02:0,6,225	0/0:12,0:12:12.04:0,12,469	0/0:12,0:12:3.01:0,3,197	0/0:15,0:17:8.77:0,9,128	0/0:20,0:20:20.50:0,21,526	./.	0/1:18,1:19:21.11:21,0,64	0/1:14,0:14:3.81:4,0,126	0/0:14,0:14:9.97:0,10,472	./.	0/0:14,0:14:18.06:0,18,846	0/0:13,0:13:3.48:0,3,196	1/1:20,0:20:1.67:52,2,0	1/1:15,5:20:0.88:113,1,0	0/0:16,0:15:3.01:0,3,48
chr10	69732012	.	T	TTTTG	6297.76	PASS	AC=12;AF=0.214;AN=56;BaseQRankSum=-10.265;DP=655;FS=0.000;HRun=0;HaplotypeScore=95.4434;InbreedingCoeff=0.9362;MQ=66.17;MQ0=11;MQRankSum=0.602;QD=42.27;ReadPosRankSum=2.405;VQSLOD=4.9512;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:4,28:35:45.15:1119,45,0	0/0:3,0:3:9.03:0,9,152	0/0:26,0:12:8.46:0,8,96	0/0:36,0:18:2.20:0,2,117	1/1:3,20:24:51.17:1255,51,0	0/0:21,0:20:54.18:0,54,856	0/0:20,0:20:42.13:0,42,657	0/0:28,0:27:57.18:0,57,902	0/0:21,0:21:48.16:0,48,778	0/0:22,0:22:54.18:0,54,902	0/0:29,0:29:69.22:0,69,1089	0/0:22,0:22:60.21:0,60,1011	0/0:28,0:28:66.23:0,66,1102	0/0:26,0:26:60.20:0,60,984	0/0:27,0:27:66.22:0,66,1086	0/0:22,0:22:57.17:0,57,909	1/1:6,13:19:29.13:678,29,0	1/1:6,13:20:35.97:785,36,0	0/0:17,0:15:36.12:0,36,588	0/0:27,0:27:69.21:0,69,1093	0/0:14,0:12:27.07:0,27,416	0/0:21,0:21:57.19:0,57,941	1/1:3,19:23:45.07:1071,45,0	1/1:1,25:27:57.20:1389,57,0	0/0:28,0:28:72.23:0,72,1164	0/0:27,0:27:66.21:0,66,1051	0/0:30,0:30:78.25:0,78,1251	0/0:9,0:9:20.86:0,21,307
chr10	69733034	.	TCA	T	1409.88	PASS	AB=0.967;AC=12;AF=0.214;AN=56;BaseQRankSum=2.414;DP=530;FS=0.000;HRun=0;HaplotypeScore=73.6783;InbreedingCoeff=0.7441;MQ=56.49;MQ0=19;MQRankSum=2.552;QD=12.26;ReadPosRankSum=2.113;VQSLOD=3.2912;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:34,2:35:6.38:502,6,0	0/0:10,0:10:18.06:0,18,278	0/0:37,0:4:11.44:0,11,97	0/0:48,0:6:8.39:0,8,79	1/1:10,0:10:5.06:146,5,0	0/0:18,1:19:12.94:0,13,635	0/0:31,0:31:87.14:0,87,1252	0/0:24,0:24:41.58:0,42,548	0/1:13,1:14:5.09:5,0,448	0/0:15,0:15:38.09:0,38,488	0/0:6,0:6:15.04:0,15,207	0/0:10,0:9:21:0,21,309	0/0:16,0:16:35.99:0,36,536	0/0:18,0:18:4.12:0,4,590	0/0:20,0:20:51.02:0,51,775	0/0:12,0:12:33:0,33,507	1/1:19,0:19:11.65:322,12,0	1/1:9,0:9:17.73:200,18,0	0/0:21,0:21:14.23:0,14,642	0/0:16,0:16:32.89:0,33,422	0/0:25,0:25:31.30:0,31,258	0/0:9,0:9:23.86:0,24,319	0/1:12,0:12:1.18:111,0,1	1/1:15,0:15:27:290,27,0	0/0:18,0:18:42.03:0,42,639	0/0:22,0:22:51.93:0,52,728	0/0:20,0:20:53.24:0,53,598	0/0:18,0:18:29.35:0,29,326
chr10	69733044	.	A	AC	328.26	PASS	AB=0.951;AC=9;AF=0.161;AN=56;BaseQRankSum=5.725;DP=552;FS=3.454;HRun=1;HaplotypeScore=76.2322;InbreedingCoeff=0.5146;MQ=54.41;MQ0=24;MQRankSum=0.755;QD=2.81;ReadPosRankSum=0.064;VQSLOD=-0.4000;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:41,0:40:86.45:101,0,86	0/0:8,0:8:18.04:0,18,209	0/0:39,0:4:11.77:0,12,124	0/0:48,0:5:9.01:0,9,101	1/1:11,0:11:13.11:80,13,0	0/0:21,0:21:62.68:0,63,764	0/0:31,0:31:93.22:0,93,1147	0/0:24,0:23:56.87:0,57,658	0/0:13,0:13:38.60:0,39,461	0/0:16,0:16:39.12:0,39,491	0/0:7,0:7:15.93:0,16,195	0/0:11,0:10:27.09:0,27,348	0/0:16,0:16:42.12:0,42,524	0/0:14,0:14:39.03:0,39,506	0/0:21,0:21:60.19:0,60,776	0/0:16,0:14:36.12:0,36,466	0/1:19,3:23:62.36:124,0,62	0/1:13,0:12:2.30:2,0,76	0/0:23,0:23:65.90:0,66,813	0/0:15,0:15:33.11:0,33,422	0/0:30,0:30:33.11:0,33,427	0/0:11,0:11:27.08:0,27,338	1/1:9,1:10:5.50:43,6,0	1/1:18,1:18:3.53:114,4,0	0/0:19,0:18:45.14:0,45,579	0/0:19,0:19:57.18:0,57,735	0/0:21,0:21:57.09:0,57,734	0/0:12,0:12:30.10:0,30,389
chr10	69733047	.	CCA	C	1160.16	PASS	AB=0.879;AC=21;AF=0.389;AN=54;BaseQRankSum=2.401;DP=566;FS=0.000;HRun=0;HaplotypeScore=80.6148;InbreedingCoeff=0.3224;MQ=54.01;MQ0=27;MQRankSum=0.719;QD=3.74;ReadPosRankSum=0.947;VQSLOD=2.1140;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:41,0:40:70.49:0,70,842	0/0:4,0:9:12.02:0,12,135	./.	0/1:50,0:5:0:0,0,0	0/0:11,0:12:20.79:0,21,244	0/1:21,1:23:66.90:67,0,297	0/0:28,1:29:2.47:0,2,463	0/1:13,9:21:17.38:221,0,17	0/0:15,0:15:26.92:0,27,363	0/1:13,1:15:7.13:7,0,229	0/0:9,0:9:15.05:0,15,199	0/1:11,1:11:9.57:10,0,286	0/1:14,2:16:6.55:7,0,333	0/0:14,0:14:21.07:0,21,315	0/0:21,2:23:17.49:0,17,661	0/1:14,3:15:0.75:1,0,396	0/0:22,0:25:21.80:0,22,193	0/0:10,0:12:8.76:0,9,87	1/1:18,5:23:14.90:144,15,0	1/1:10,7:18:8.86:81,9,0	1/1:5,24:30:23.98:253,24,0	0/1:10,2:11:21.61:22,0,122	0/0:7,0:9:7.79:0,8,52	0/0:16,0:16:2.98:0,3,22	0/1:15,4:18:9.66:10,0,258	1/1:13,6:19:12.03:131,12,0	1/1:11,9:21:23.90:249,24,0	1/1:7,5:12:12.03:135,12,0
chr10	69733287	.	GT	G	637.47	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=6.630;DP=512;FS=18.036;HRun=9;HaplotypeScore=50.0118;InbreedingCoeff=0.8676;MQ=72.40;MQ0=2;MQRankSum=1.372;QD=21.98;ReadPosRankSum=-4.354;VQSLOD=1.3892;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:66.20:0,66,762	0/0:7,0:7:18.04:0,18,198	0/0:17,0:15:24.48:0,24,226	0/0:13,0:8:5.91:0,6,135	0/0:19,1:20:32.71:0,33,630	0/0:21,0:21:60.14:0,60,677	0/0:7,0:7:15.03:0,15,164	1/1:2,27:29:81.01:732,81,0	0/0:17,0:17:48.12:0,48,535	0/0:25,0:25:60.18:0,60,692	0/0:22,0:22:60.17:0,60,680	0/0:18,0:18:48.14:0,48,554	0/0:23,0:23:40.12:0,40,616	0/0:19,0:19:51.13:0,51,576	0/0:13,0:13:39.12:0,39,450	0/0:26,0:26:66.20:0,66,762	0/0:24,0:24:69.18:0,69,783	0/0:18,0:18:48.14:0,48,554	0/0:23,0:23:54.13:0,54,598	0/0:26,0:26:63.18:0,63,719	0/0:8,0:8:18.05:0,18,208	0/0:14,0:14:33.09:0,33,373	0/0:12,0:12:25.09:0,25,329	0/0:8,0:8:18.04:0,18,199	0/0:26,0:27:78.09:0,78,869	0/0:24,0:24:63.19:0,63,727	0/0:17,0:17:45.12:0,45,510	0/0:9,0:9:27.08:0,27,312
chr10	69733500	.	C	CTG	17500.55	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-11.397;DP=685;FS=4.139;HRun=0;HaplotypeScore=80.3126;InbreedingCoeff=0.9957;MQ=79.49;MQ0=1;MQRankSum=-1.217;QD=51.78;ReadPosRankSum=-2.734;VQSLOD=4.5538;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:1,45:46:99:2357,129,0	0/0:11,0:11:33.11:0,33,505	0/0:19,0:19:54.18:0,54,816	0/0:17,0:17:40.67:0,41,523	1/1:4,14:18:45.14:796,45,0	0/0:20,0:20:60.16:0,60,869	0/0:27,0:27:78.25:0,78,1173	1/1:4,31:35:99:1887,99,0	0/0:31,0:31:93.32:0,93,1424	0/0:21,0:21:60.20:0,60,900	0/0:20,0:20:54.18:0,54,826	0/0:27,0:27:81.26:0,81,1210	0/0:25,0:25:75.22:0,75,1123	0/0:31,0:31:90.31:0,90,1375	0/0:28,0:28:84.27:0,84,1264	0/0:34,0:34:99:0,99,1512	1/1:0,18:18:42.14:811,42,0	1/1:0,19:19:57.20:1101,57,0	1/1:0,29:29:87.30:1680,87,0	1/1:1,24:25:63.22:1214,63,0	1/1:0,36:36:93.32:1797,93,0	0/0:12,0:12:36.12:0,36,551	1/1:0,18:18:54.19:1043,54,0	1/1:3,30:33:87.30:1680,87,0	0/0:24,0:24:72.23:0,72,1082	1/1:2,26:28:81.26:1512,81,0	1/1:2,26:28:72.25:1390,72,0	1/1:0,4:4:12.04:232,12,0
chr10	69735067	.	AAGC	A	2328.56	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=10.911;DP=633;FS=24.704;HRun=0;HaplotypeScore=104.8583;InbreedingCoeff=0.9132;MQ=59.73;MQ0=44;MQRankSum=-5.749;QD=29.11;ReadPosRankSum=2.519;VQSLOD=2.1346;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:27,0:27:78.25:0,78,1549	0/0:6,0:6:18.03:0,18,319	0/0:25,0:8:10.82:0,11,192	0/0:35,0:10:22.80:0,23,344	0/0:27,0:27:78.18:0,78,1385	0/0:30,0:30:90.29:0,90,1804	0/0:20,0:20:54.15:0,54,977	0/0:26,0:25:71.75:0,72,1088	0/0:22,0:22:66.18:0,66,1255	0/0:17,0:17:47.78:0,48,815	0/0:21,0:21:59.93:0,60,1151	0/0:20,0:20:57.16:0,57,1090	0/0:36,0:36:99:0,105,2071	0/0:16,0:16:45.09:0,45,793	0/0:39,0:39:99:0,111,2147	0/0:27,0:27:81.09:0,81,1414	1/1:6,12:14:36.12:579,36,0	1/1:2,18:17:30.10:507,30,0	0/0:11,0:10:27.05:0,27,379	0/0:19,0:19:21.27:0,21,602	0/0:11,0:11:32.83:0,33,549	0/0:36,0:36:98.98:0,99,1832	1/1:9,23:27:74.45:1148,74,0	1/1:5,5:6:15.05:253,15,0	0/0:20,0:20:60.04:0,60,1157	0/0:32,0:31:3.86:0,4,1007	0/0:26,0:26:77.98:0,78,1359	0/0:3,0:3:6.02:0,6,131
chr10	69735082	.	CAGAAGGAGAAGG	C	5071.21	PASS	AB=0.642;AC=21;AF=0.404;AN=52;BaseQRankSum=12.021;DP=643;FS=10.408;HRun=0;HaplotypeScore=203.1826;InbreedingCoeff=0.8468;MQ=53.99;MQ0=76;MQRankSum=-5.449;QD=23.16;ReadPosRankSum=-2.464;VQSLOD=2.6527;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:28,0:27:36.12:0,36,1392	0/0:7,0:7:15.05:0,15,563	./.	./.	0/0:22,0:22:36.06:0,36,1336	0/0:27,0:27:39.13:0,39,1628	0/0:20,0:20:30.10:0,30,982	1/1:24,0:21:3.01:41,3,0	0/0:21,0:21:33.08:0,33,1140	0/0:15,0:15:27.09:0,27,1120	0/0:19,0:19:36.10:0,36,1343	0/0:22,0:22:48.16:0,48,1865	0/0:34,0:34:72.23:0,72,3002	0/0:13,0:13:27.09:0,27,1298	0/0:34,0:34:78.24:0,78,2969	0/0:27,0:27:57.18:0,57,2316	1/1:18,0:14:21.03:411,21,0	1/1:18,0:15:14.89:350,15,0	1/1:7,1:6:9.03:203,9,0	1/1:4,16:20:29.90:474,30,0	1/1:9,0:9:6.02:96,6,0	0/0:33,0:32:57.18:0,57,2489	1/1:43,0:37:55.06:1198,55,0	1/1:9,0:5:9:152,9,0	0/0:27,0:26:51.15:0,51,1828	0/1:15,19:33:99:1256,0,114	1/1:24,4:28:36.04:719,36,0	1/1:8,0:7:12.04:172,12,0
chr10	69735136	.	AAAAG	A	410.52	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=2.334;DP=653;FS=5.868;HRun=0;HaplotypeScore=152.2990;InbreedingCoeff=0.7560;MQ=49.99;MQ0=26;MQRankSum=0.682;QD=22.81;ReadPosRankSum=-3.600;VQSLOD=2.6004;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:23,0:23:24.06:0,24,360	0/0:8,0:8:21.07:0,21,465	0/0:49,0:4:6.02:0,6,92	0/0:55,0:11:29.79:0,30,411	0/0:32,0:32:60.17:0,60,1025	0/0:19,0:19:45.15:0,45,1027	0/0:13,0:12:17.19:0,17,410	1/1:6,12:17:33.10:505,33,0	0/0:17,0:17:48.13:0,48,983	0/0:22,0:22:63.17:0,63,1296	0/0:26,0:26:63.20:0,63,1497	0/0:27,0:27:72.24:0,72,1637	0/0:24,0:24:54.16:0,54,1161	0/0:22,0:22:57.18:0,57,1251	0/0:32,0:32:78.24:0,78,1697	0/0:30,0:30:72.25:0,72,1648	0/0:10,0:10:21.03:0,21,338	0/0:7,0:7:8.86:0,9,106	0/0:17,0:17:45:0,45,694	0/0:28,0:27:58.66:0,59,885	0/0:10,0:10:12.72:0,13,222	0/0:24,0:23:45.15:0,45,941	0/0:33,0:30:57.06:0,57,757	0/0:4,0:4:6.02:0,6,129	0/0:28,0:28:75.26:0,75,1685	0/0:30,0:29:72.02:0,72,1285	0/0:32,0:29:76.94:0,77,1351	0/0:13,0:12:34.76:0,35,562
chr10	69735158	.	AAG	A	559.38	PASS	AB=0.877;AC=5;AF=0.089;AN=56;BaseQRankSum=7.592;DP=593;FS=19.324;HRun=0;HaplotypeScore=119.1170;InbreedingCoeff=-0.1201;MQ=50.41;MQ0=21;MQRankSum=-8.165;QD=5.13;ReadPosRankSum=-0.912;VQSLOD=1.6769;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/0:22,0:22:21.07:0,21,335	0/0:7,0:7:21.06:0,21,366	0/0:14,0:2:3.01:0,3,42	0/0:30,0:5:9.03:0,9,117	0/0:35,0:35:63.20:0,63,947	0/0:18,0:18:54.18:0,54,1008	0/0:19,0:18:51.65:0,52,918	0/0:30,0:26:56.15:0,56,608	0/0:19,0:19:57.17:0,57,986	0/0:19,0:18:54.18:0,54,968	0/0:26,0:26:78.23:0,78,1385	0/0:28,0:28:81.28:0,81,1477	0/0:19,0:19:57.18:0,57,1001	0/0:20,0:20:60.21:0,60,1093	0/0:27,0:27:78.24:0,78,1356	0/0:28,0:28:81.26:0,81,1444	0/0:10,0:9:18.06:0,18,296	0/0:7,0:6:11.90:0,12,147	0/0:17,1:18:2.54:0,3,643	0/1:22,3:24:99:101,0,578	0/1:10,0:10:50.21:50,0,184	0/0:18,0:18:54.17:0,54,944	0/0:29,0:26:62.73:0,63,904	0/0:6,0:6:9.03:0,9,169	0/0:35,0:35:99:0,102,1811	0/1:22,6:27:99:235,0,762	0/1:27,3:27:99:100,0,910	0/1:11,5:15:99:190,0,319
chr10	69735176	.	GAA	G	2617.73	PASS	AB=0.763;AC=16;AF=0.296;AN=54;BaseQRankSum=11.350;DP=579;FS=15.512;HRun=5;HaplotypeScore=104.9961;InbreedingCoeff=0.4093;MQ=50.29;MQ0=19;MQRankSum=-7.439;QD=12.12;ReadPosRankSum=-1.774;VQSLOD=-0.3948;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:25,0:25:5.92:0,6,39	0/0:9,0:9:27.09:0,27,447	./.	0/0:14,0:1:2.99:0,3,23	0/0:33,0:33:3.80:0,4,198	0/0:24,0:24:66.18:0,66,1108	0/0:16,0:16:48.16:0,48,860	0/1:34,0:25:42.11:42,0,119	0/0:17,0:17:48.16:0,48,852	0/0:25,0:24:72.24:0,72,1200	0/0:28,0:28:81.28:0,81,1436	0/0:26,0:26:78.24:0,78,1305	0/0:19,0:19:57.19:0,57,972	0/0:19,0:19:54.18:0,54,922	0/0:24,0:24:72.22:0,72,1185	0/0:22,0:22:63.22:0,63,1107	1/1:2,9:10:5.79:125,6,0	1/1:2,5:6:9.03:126,9,0	0/1:14,4:18:99:189,0,204	0/1:13,6:19:19.23:288,0,19	0/1:7,9:15:0.97:243,0,1	0/0:16,0:16:45.15:0,45,787	1/1:21,4:22:31.58:347,32,0	1/1:9,0:9:9.81:87,10,0	0/0:34,0:34:93.32:0,93,1621	1/1:13,11:22:12.63:418,13,0	0/1:21,12:29:49.79:485,0,50	0/1:8,12:19:33.22:442,0,33
chr10	69735178	.	A	AAGAAAAAG	5818.41	PASS	AC=26;AF=0.481;AN=54;BaseQRankSum=10.438;DP=593;FS=5.947;HRun=0;HaplotypeScore=156.6420;InbreedingCoeff=0.8578;MQ=51.32;MQ0=19;MQRankSum=-8.537;QD=20.49;ReadPosRankSum=-1.400;VQSLOD=3.7092;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:2,21:26:9.03:378,9,0	0/0:10,0:10:27.09:0,27,550	./.	0/0:15,0:2:2.99:0,3,23	1/1:1,29:35:54.18:1371,54,0	0/0:24,0:24:69.18:0,69,1451	0/0:17,0:17:48.16:0,48,1118	1/1:37,0:28:1.16:395,1,0	0/0:16,0:16:48.16:0,48,1164	0/0:27,0:26:75.21:0,75,1576	0/0:29,0:29:84.27:0,84,2019	0/0:26,0:26:78.24:0,78,1824	0/0:19,0:19:57.19:0,57,1294	0/0:20,0:20:54.18:0,54,1211	0/0:25,0:25:75.22:0,75,1630	0/0:22,0:22:63.22:0,63,1558	1/1:10,0:10:3.07:107,3,0	1/1:6,0:6:2.97:20,3,0	1/1:16,0:17:36.22:382,36,0	1/1:19,0:19:44.62:652,45,0	1/1:18,0:17:24.41:218,24,0	0/0:15,0:15:45.15:0,45,1100	1/1:7,0:25:32.07:328,32,0	1/1:1,0:9:2.62:113,3,0	0/0:32,0:32:90.31:0,90,2069	1/1:24,0:22:49.20:619,49,0	1/1:32,0:29:71.18:956,71,0	1/1:20,0:19:23.11:280,23,0
chr10	69736008	.	A	AAAACAAACAAAC	18440.01	PASS	AB=1.000;AC=27;AF=0.482;AN=56;BaseQRankSum=3.454;DP=600;FS=10.514;HRun=0;HaplotypeScore=204.0646;InbreedingCoeff=0.9235;MQ=56.50;MQ0=1;MQRankSum=-13.900;QD=57.09;ReadPosRankSum=-7.816;VQSLOD=1.8624;culprit=ReadPosRankSum;set=input10	GT:AD:DP:GQ:PL	1/1:26,0:35:33.58:876,34,0	0/0:5,0:5:15.05:0,15,468	0/0:16,0:12:12.04:0,12,324	0/1:15,0:11:1.74:2,0,190	1/1:9,0:21:42.14:1095,42,0	0/0:20,0:20:48.16:0,48,1549	0/0:19,0:19:39.11:0,39,1093	1/1:34,0:38:54.12:1267,54,0	0/0:19,0:19:51.17:0,51,1662	0/0:17,0:17:36.11:0,36,1064	0/0:25,0:25:57.19:0,57,1860	0/0:32,0:32:78.24:0,78,2447	0/0:16,0:17:48.16:0,48,1595	0/0:16,0:16:39.13:0,39,1362	0/0:32,0:32:72.25:0,72,2427	0/0:17,0:17:36.12:0,36,1254	1/1:26,5:31:39.10:1869,39,0	1/1:11,6:19:18.95:1020,19,0	1/1:25,0:25:51.16:1805,51,0	1/1:15,11:26:45.15:2453,45,0	1/1:17,0:17:15.05:446,15,0	0/0:21,0:21:36.10:0,36,1166	1/1:13,6:20:33.11:1817,33,0	1/1:15,7:24:33.11:1689,33,0	0/0:21,0:21:48.16:0,48,1462	1/1:11,9:22:48.14:2225,48,0	1/1:20,6:27:36.04:1701,36,0	1/1:2,1:3:3.01:176,3,0
chr10	69736815	.	GGAA	G	1555.62	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=8.250;DP=566;FS=0.000;HRun=0;HaplotypeScore=77.7281;InbreedingCoeff=0.9393;MQ=79.77;MQ0=0;MQRankSum=-3.699;QD=38.89;ReadPosRankSum=-3.941;VQSLOD=3.2769;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:33,0:33:90.31:0,90,1968	0/0:8,0:8:21.07:0,21,459	0/0:18,0:18:33.01:0,33,516	0/0:11,0:11:8.97:0,9,89	0/0:18,0:18:51.18:0,51,1115	0/0:21,0:21:63.20:0,63,1260	0/0:15,0:15:45.14:0,45,922	1/1:6,34:40:99:1650,105,0	0/0:14,0:14:33.10:0,33,680	0/0:21,0:21:63.22:0,63,1340	0/0:19,0:19:45.15:0,45,983	0/0:20,0:20:57.20:0,57,1241	0/0:19,0:19:54.19:0,54,1175	0/0:15,0:15:33.11:0,33,695	0/0:23,0:23:66.23:0,66,1426	0/0:25,0:25:72.25:0,72,1557	0/0:27,0:27:78.27:0,78,1704	0/0:20,0:20:60.17:0,60,1217	0/0:35,0:35:99:0,99,2008	0/0:21,0:21:51.17:0,51,1115	0/0:18,0:18:48.15:0,48,981	0/0:21,0:21:60.19:0,60,1234	0/0:12,0:12:36.12:0,36,786	0/0:14,0:14:39.12:0,39,795	0/0:17,0:17:51.18:0,51,1115	0/0:29,0:29:81.28:0,81,1756	0/0:10,0:10:27.07:0,27,548	0/0:22,0:22:63.20:0,63,1336
chr10	69736992	.	TCACA	T	2444.80	PASS	AB=0.841;AC=13;AF=0.232;AN=56;BaseQRankSum=4.418;DP=600;FS=4.818;HRun=0;HaplotypeScore=123.5913;InbreedingCoeff=0.6654;MQ=73.16;MQ0=4;MQRankSum=1.369;QD=14.73;ReadPosRankSum=2.011;VQSLOD=3.2953;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:12,0:36:41.73:0,42,750	0/0:8,0:8:21.04:0,21,466	0/0:26,0:20:12.50:0,13,197	0/0:27,0:15:7.20:0,7,24	0/0:5,0:21:27.09:0,27,484	0/0:15,0:15:36.12:0,36,829	0/0:28,0:29:62.93:0,63,1325	0/0:28,0:37:57.34:0,57,762	0/0:17,0:17:38.92:0,39,802	0/0:18,0:18:50.52:0,51,1007	0/0:21,0:23:41.61:0,42,844	0/0:13,0:16:29.84:0,30,654	0/0:20,0:20:45.15:0,45,1052	0/0:11,0:12:23.82:0,24,501	0/0:17,0:17:39.13:0,39,873	0/1:16,0:17:3.31:3,0,769	0/0:20,0:28:37:0,37,595	0/0:16,0:19:0.83:0,1,155	1/1:9,11:20:33.10:492,33,0	1/1:9,22:30:5.05:473,5,0	0/1:6,16:22:11.13:279,0,11	0/0:25,0:26:66.19:0,66,1486	0/0:11,0:16:25.54:0,26,498	0/1:24,0:26:3.75:4,0,124	0/0:21,0:22:57.15:0,57,1168	1/1:4,23:29:67.79:886,68,0	1/1:2,11:13:12.04:200,12,0	1/1:0,6:7:18.05:277,18,0
chr10	69737020	.	A	ACG	1740.87	PASS	AB=0.592;AC=6;AF=0.107;AN=56;BaseQRankSum=2.695;DP=621;FS=8.390;HRun=0;HaplotypeScore=107.7096;InbreedingCoeff=0.6763;MQ=57.48;MQ0=6;MQRankSum=-4.861;QD=19.13;ReadPosRankSum=1.641;VQSLOD=3.8494;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:37,0:37:71.96:0,72,823	0/0:8,0:8:24.06:0,24,343	0/0:21,0:13:33.49:0,33,418	0/0:22,0:11:26.73:0,27,312	0/0:22,0:22:46.24:0,46,534	0/0:15,0:15:42.07:0,42,592	0/0:29,0:29:72.15:0,72,1026	0/0:38,0:36:99:0,109,1351	0/0:22,0:22:66.17:0,66,904	0/0:20,0:19:54.15:0,54,751	0/0:16,0:16:48.10:0,48,634	0/0:17,0:17:42.07:0,42,573	0/0:20,0:20:47.25:0,47,691	0/0:16,0:16:42.12:0,42,600	0/0:13,0:13:39.11:0,39,570	0/0:21,0:21:63.14:0,63,822	1/1:17,11:28:42.98:986,43,0	0/1:7,12:19:30.08:269,0,30	0/0:20,0:20:55.35:0,55,738	0/0:26,0:25:45.08:0,45,586	0/0:34,0:32:48.16:0,48,730	0/0:29,0:29:84.14:0,84,1130	0/1:4,11:16:3.27:374,0,3	1/1:15,13:27:9.65:244,10,0	0/0:30,0:30:83.24:0,83,1145	0/0:31,0:31:81.15:0,81,1036	0/0:15,0:15:24.05:0,24,322	0/0:8,0:8:21.07:0,21,302
chr10	69737177	.	CAT	C	658.76	PASS	AB=0.947;AC=15;AF=0.268;AN=56;BaseQRankSum=9.195;DP=589;FS=10.832;HRun=0;HaplotypeScore=103.2270;InbreedingCoeff=-0.3516;MQ=59.82;MQ0=9;MQRankSum=0.582;QD=2.23;ReadPosRankSum=0.635;VQSLOD=1.3457;culprit=QD;set=input10	GT:AD:DP:GQ:PL	0/1:36,0:35:25.08:25,0,264	0/1:8,1:9:5.31:71,0,5	0/0:29,0:14:26.07:0,26,245	0/0:29,0:15:34.09:0,34,421	0/1:30,1:31:14.30:14,0,162	0/1:12,0:12:13.05:13,0,122	0/1:22,0:22:15.49:15,0,159	0/0:23,0:21:39.34:0,39,358	0/1:14,3:17:21.13:182,0,21	0/1:22,0:22:25.47:25,0,198	0/1:17,0:17:25.43:25,0,73	0/1:16,2:18:99:103,0,107	0/1:19,2:21:86.88:87,0,152	0/1:23,1:23:99:101,0,103	0/1:27,1:28:64.43:64,0,209	0/1:16,0:16:41.14:41,0,124	0/0:29,0:27:1.55:0,2,271	0/0:15,0:15:18.46:0,18,100	0/0:12,0:12:35.71:0,36,361	0/0:14,0:13:9.90:0,10,420	0/0:32,0:32:41.25:0,41,872	0/1:20,0:20:31.73:32,0,112	0/0:16,0:16:24.02:0,24,172	0/0:27,0:27:14.51:0,15,92	0/0:19,0:19:7.13:0,7,204	0/0:24,1:25:49.30:0,49,853	0/0:23,0:22:43.34:0,43,827	0/1:2,1:3:14.29:14,0,69
chr10	69737179	.	TAC	T	2936.98	PASS	AB=0.850;AC=38;AF=0.679;AN=56;BaseQRankSum=6.519;DP=599;FS=0.000;HRun=0;HaplotypeScore=100.3593;InbreedingCoeff=0.4230;MQ=57.89;MQ0=10;MQRankSum=1.221;QD=6.45;ReadPosRankSum=2.346;VQSLOD=2.7821;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:18,16:34:23.08:204,23,0	1/1:3,6:9:15.04:162,15,0	0/0:27,0:12:0:0,0,0	0/0:26,0:14:2.99:0,3,24	1/1:11,18:31:2.80:208,3,0	1/1:8,3:12:14.54:127,15,0	1/1:12,10:22:11.64:97,12,0	0/0:8,0:21:8.24:0,8,78	1/1:5,12:17:24.01:252,24,0	1/1:9,14:23:38.45:360,38,0	1/1:6,12:18:11.89:135,12,0	1/1:8,11:19:15.02:151,15,0	1/1:12,7:19:15.04:165,15,0	1/1:8,14:21:26.86:278,27,0	1/1:12,15:28:13.86:216,14,0	1/1:7,7:15:17.55:161,18,0	0/1:22,0:30:22.83:114,0,23	0/1:6,0:16:21.26:38,0,21	0/0:15,0:14:14.86:0,15,150	0/1:14,0:13:7.24:7,0,278	0/1:33,0:34:13.49:13,0,588	1/1:7,13:20:21.06:237,21,0	1/1:8,0:17:8.52:42,9,0	1/1:14,0:28:8.66:49,9,0	0/1:13,8:21:52.08:96,0,52	0/0:29,0:29:48.97:0,49,604	0/0:23,0:23:29.43:0,29,532	0/1:3,0:3:0.53:1,0,41
chr10	69738311	.	TA	T	579.22	PASS	AB=0.647;AC=4;AF=0.074;AN=54;BaseQRankSum=7.946;DP=499;FS=16.535;HRun=5;HaplotypeScore=55.1561;InbreedingCoeff=-0.0827;MQ=61.92;MQ0=0;MQRankSum=-2.776;QD=7.72;ReadPosRankSum=0.120;VQSLOD=-0.1952;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:20,0:20:60.20:0,60,809	0/0:14,0:14:36.12:0,36,492	0/0:6,0:6:12.03:0,12,148	./.	0/0:31,0:31:84.28:0,84,1149	0/0:20,0:20:57.19:0,57,779	0/0:4,0:4:12.04:0,12,164	0/0:31,0:31:84.24:0,84,1109	0/0:15,0:15:42.14:0,42,575	0/0:30,0:30:90.30:0,90,1222	0/0:25,0:25:72.24:0,72,985	0/0:9,0:9:27.09:0,27,367	0/0:13,0:13:39.12:0,39,518	0/0:12,0:12:36.12:0,36,484	0/0:13,0:13:36.11:0,36,479	0/0:15,0:15:42.14:0,42,574	0/1:9,8:16:99:134,0,251	0/1:8,9:17:99:169,0,134	0/0:18,0:18:51.15:0,51,666	0/0:30,0:30:84.28:0,84,1149	0/0:10,0:10:24.08:0,24,328	0/0:5,0:5:15.05:0,15,205	0/1:15,17:32:99:296,0,537	0/1:3,6:9:29:90,0,29	0/0:30,0:30:87.29:0,87,1190	0/0:32,0:31:96.32:0,96,1314	0/0:17,0:17:48.16:0,48,657	0/0:23,0:23:69.19:0,69,924
chr10	69739419	.	T	TAC	17430.60	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=-8.629;DP=749;FS=1.204;HRun=0;HaplotypeScore=95.4924;InbreedingCoeff=0.9998;MQ=87.41;MQ0=0;MQRankSum=-4.453;QD=48.83;ReadPosRankSum=2.993;VQSLOD=5.8121;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:1,52:54:99:2720,141,0	0/0:13,0:13:39.13:0,39,597	0/0:30,0:30:84.26:0,84,1215	0/0:22,0:23:62.92:0,63,906	1/1:2,24:26:69.24:1333,69,0	0/0:20,0:20:60.20:0,60,918	0/0:24,0:24:72.20:0,72,1038	1/1:5,26:31:84.25:1505,84,0	0/0:22,0:22:63.20:0,63,941	0/0:32,0:32:93.31:0,93,1402	0/0:21,0:21:63.21:0,63,953	0/0:28,0:28:78.24:0,78,1150	0/0:20,0:20:60.20:0,60,916	0/0:33,0:33:96.33:0,96,1468	0/0:40,0:40:99:0,120,1836	0/0:34,0:33:99:0,99,1486	1/1:0,29:30:78.27:1505,78,0	1/1:2,18:20:51.17:984,51,0	1/1:3,18:21:60.21:1156,60,0	1/1:1,16:17:45.15:869,45,0	1/1:1,36:37:96.33:1854,96,0	0/0:23,0:23:65.92:0,66,981	1/1:1,24:26:57.11:1059,57,0	1/1:4,18:22:45.15:868,45,0	0/0:29,0:29:81.25:0,81,1196	1/1:3,21:25:26.27:1204,26,0	1/1:0,26:26:66.23:1274,66,0	1/1:0,22:22:57.20:1100,57,0
chr10	69740007	.	TG	T	1405.14	PASS	AB=0.944;AC=9;AF=0.161;AN=56;BaseQRankSum=5.689;DP=534;FS=5.020;HRun=1;HaplotypeScore=79.5561;InbreedingCoeff=0.8422;MQ=87.39;MQ0=3;MQRankSum=-1.733;QD=13.38;ReadPosRankSum=-1.629;VQSLOD=2.0593;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:17,0:17:18.64:0,19,268	0/0:10,0:10:29:0,29,308	0/0:43,0:27:17.99:0,18,403	0/0:35,0:25:24.53:0,25,396	0/0:24,0:25:62.56:0,63,556	0/0:20,0:20:54.18:0,54,607	0/0:17,0:17:35.57:0,36,539	0/0:24,0:25:67.02:0,67,814	0/0:17,0:17:44.40:0,44,499	0/0:24,0:24:67.98:0,68,709	0/0:13,0:13:35.97:0,36,389	0/0:14,0:14:37.88:0,38,388	0/0:18,0:18:38.36:0,38,593	0/1:15,1:17:25.78:26,0,359	0/0:21,0:21:59.59:0,60,694	0/0:17,0:17:44.59:0,45,523	1/1:17,11:28:68.77:637,69,0	1/1:16,6:22:48.40:446,48,0	0/0:15,0:15:38.98:0,39,393	0/0:12,0:12:29.41:0,29,297	0/0:6,0:6:8.72:0,9,58	0/0:25,0:25:74.98:0,75,824	1/1:17,1:18:18.10:116,18,0	1/1:15,5:20:44.96:345,45,0	0/0:17,0:17:42.65:0,43,483	0/0:16,0:16:46.89:0,47,407	0/0:16,0:15:29.81:0,30,276	0/0:6,0:6:13.50:0,14,103
chr10	69740023	.	AG	A	1572.60	PASS	AC=8;AF=0.143;AN=56;BaseQRankSum=5.780;DP=501;FS=24.713;HRun=1;HaplotypeScore=75.8906;InbreedingCoeff=0.9190;MQ=80.05;MQ0=0;MQRankSum=0.167;QD=18.29;ReadPosRankSum=-2.960;VQSLOD=2.0270;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:15,0:15:25.95:0,26,220	0/0:11,0:11:28.74:0,29,275	0/0:23,0:18:10.14:0,10,264	0/0:19,0:15:15.10:0,15,159	0/0:34,0:34:22.76:0,23,558	0/0:19,0:19:21.41:0,21,388	0/0:22,0:22:53.90:0,54,552	0/0:31,0:31:49.47:0,49,700	0/0:17,0:17:39.28:0,39,423	0/0:17,0:17:47.36:0,47,496	0/0:13,0:13:26.80:0,27,254	0/0:10,0:10:19.77:0,20,157	0/0:17,0:17:47.06:0,47,503	0/0:16,0:16:14.07:0,14,237	0/0:17,0:17:48.07:0,48,538	0/0:15,0:15:37.94:0,38,395	1/1:27,2:29:72.97:699,73,0	1/1:21,2:23:55.24:543,55,0	0/0:14,0:14:32.86:0,33,313	0/0:17,0:17:15.87:0,16,191	0/0:6,0:6:8.91:0,9,65	0/0:21,0:21:56.78:0,57,571	1/1:0,16:16:5.93:41,6,0	1/1:16,2:18:40.62:443,41,0	0/0:20,0:20:43.76:0,44,404	0/0:20,0:20:52.91:0,53,466	0/0:13,0:13:27.91:0,28,256	0/0:5,0:5:14.42:0,14,114
chr10	69740564	.	GCCCC	G	1533.99	PASS	AC=2;AF=0.036;AN=56;BaseQRankSum=5.220;DP=723;FS=12.409;HRun=5;HaplotypeScore=126.4120;InbreedingCoeff=0.9975;MQ=84.59;MQ0=0;MQRankSum=-6.165;QD=49.48;ReadPosRankSum=-3.998;VQSLOD=0.6755;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,132,3545	0/0:10,0:10:30.10:0,30,839	0/0:22,0:22:63.22:0,63,1750	0/0:25,0:25:72.25:0,72,1935	0/0:20,0:20:57.20:0,57,1569	0/0:24,0:24:69.24:0,69,1921	0/0:26,0:26:75.26:0,75,2092	1/1:0,31:31:87.27:1629,87,0	0/0:23,0:23:69.23:0,69,1864	0/0:22,0:22:66.22:0,66,1788	0/0:15,0:15:45.15:0,45,1246	0/0:30,0:30:90.30:0,90,2439	0/0:23,0:23:69.24:0,69,1930	0/0:26,0:26:78.27:0,78,2160	0/0:29,0:29:84.29:0,84,2334	0/0:29,0:29:84.29:0,84,2352	0/0:29,0:29:87.28:0,87,1771	0/0:29,0:29:87.30:0,87,1796	0/0:26,0:26:75.12:0,75,1940	0/0:20,0:20:57.19:0,57,1537	0/0:45,0:45:99:0,132,3661	0/0:40,0:40:99:0,120,3344	0/0:25,0:25:75.26:0,75,1547	0/0:26,0:26:75.26:0,75,1560	0/0:19,0:19:51.18:0,51,1421	0/0:27,0:27:81.28:0,81,2204	0/0:30,0:30:87.30:0,87,2431	0/0:8,0:8:24.08:0,24,658
chr10	69742644	.	TAAAA	T	1364.80	PASS	AB=0.714;AC=5;AF=0.089;AN=56;BaseQRankSum=3.596;DP=595;FS=0.606;HRun=17;HaplotypeScore=110.4327;InbreedingCoeff=0.8169;MQ=66.46;MQ0=2;MQRankSum=2.472;QD=16.44;ReadPosRankSum=7.139;VQSLOD=0.7956;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:5,29:35:55.83:912,56,0	0/0:9,0:15:33.89:0,34,523	0/0:23,0:10:20.72:0,21,223	0/0:15,0:11:17.76:0,18,211	1/1:7,18:28:43.23:540,43,0	0/0:24,0:25:54.15:0,54,999	0/0:11,0:17:32.32:0,32,561	0/1:12,2:20:6.27:42,0,6	0/0:18,0:18:39.03:0,39,750	0/0:23,0:26:57.15:0,57,866	0/0:22,0:25:57.16:0,57,953	0/0:15,0:17:51.13:0,51,915	0/0:19,0:19:30.10:0,30,582	0/0:18,0:20:39.11:0,39,681	0/0:30,0:31:69.17:0,69,1161	0/0:21,0:26:62.13:0,62,1079	0/0:6,0:10:25.29:0,25,141	0/0:8,0:20:40.68:0,41,258	0/0:10,0:14:35.32:0,35,592	0/0:22,0:25:65.16:0,65,1162	0/0:8,0:22:14.99:0,15,213	0/0:29,0:31:63.10:0,63,1090	0/0:11,0:17:31.39:0,31,261	0/0:2,0:14:33.60:0,34,246	0/0:17,0:23:54.04:0,54,832	0/0:14,0:18:45.10:0,45,759	0/0:19,0:22:63.08:0,63,1071	0/0:10,0:15:41.57:0,42,603
chr10	69742841	.	A	AACCATCAT	6881.30	PASS	AB=1.000;AC=9;AF=0.161;AN=56;BaseQRankSum=4.046;DP=607;FS=2.375;HRun=0;HaplotypeScore=151.3024;InbreedingCoeff=0.8572;MQ=70.15;MQ0=0;MQRankSum=-11.346;QD=86.02;ReadPosRankSum=-0.753;VQSLOD=5.2411;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:47,0:47:99:0,138,3806	0/0:8,0:8:24.08:0,24,703	0/0:9,0:9:13.30:0,13,325	0/1:8,0:8:16.39:16,0,443	0/0:22,0:22:66.23:0,66,1856	0/0:27,0:26:78.21:0,78,2107	0/0:25,0:25:69.24:0,69,1981	0/0:26,0:26:78.27:0,78,2223	0/0:24,0:24:72.25:0,72,2086	0/0:33,0:33:93.30:0,93,2486	0/0:12,0:12:33.09:0,33,842	0/0:23,0:23:69.19:0,69,1892	0/0:24,0:24:69.21:0,69,1934	0/0:25,0:25:75.24:0,75,2096	0/0:26,0:26:78.25:0,78,2175	0/0:29,0:29:87.30:0,87,2473	1/1:5,8:13:33.11:1357,33,0	1/1:5,5:13:30.10:1275,30,0	0/0:24,0:24:66.22:0,66,1807	0/0:25,0:25:72.21:0,72,1900	0/0:30,0:30:87.28:0,87,2388	0/0:16,0:16:48.16:0,48,1344	1/1:7,17:25:57.19:2396,57,0	1/1:8,12:21:45.11:1836,45,0	0/0:19,0:19:57.20:0,57,1650	0/0:27,0:27:78.26:0,78,2134	0/0:22,0:21:63.19:0,63,1768	0/0:4,0:4:12.04:0,12,284
chr10	69744093	.	T	TATACATAC	3594.11	PASS	AB=1.000;AC=14;AF=0.269;AN=52;BaseQRankSum=0.557;DP=531;FS=1.379;HRun=0;HaplotypeScore=157.2651;InbreedingCoeff=0.7351;MQ=67.23;MQ0=2;MQRankSum=-4.786;QD=20.90;ReadPosRankSum=-2.772;VQSLOD=2.7170;culprit=FS;set=input10	GT:AD:DP:GQ:PL	0/0:19,0:19:15.01:0,15,321	0/0:6,0:6:10.85:0,11,215	0/0:23,0:15:3:0,3,28	0/0:21,0:11:2.13:0,2,23	0/0:28,0:28:41.85:0,42,898	0/0:31,0:31:63.16:0,63,1354	0/0:18,0:18:27.08:0,27,554	0/1:43,0:43:11.65:114,0,12	0/0:17,0:17:24.07:0,24,553	0/0:16,0:16:42.14:0,42,992	0/0:18,0:18:45.12:0,45,1008	0/0:14,0:14:30.10:0,30,728	0/0:14,0:14:33.11:0,33,831	0/0:13,0:13:33.11:0,33,831	0/0:21,0:21:48.14:0,48,1081	1/1:8,0:15:23.96:195,24,0	0/0:22,0:22:48.07:0,48,906	0/0:17,0:17:24.02:0,24,452	1/1:16,2:18:24.03:533,24,0	1/1:19,5:26:23.24:375,23,0	1/1:9,8:17:3.01:34,3,0	0/0:16,0:16:33.10:0,33,702	0/1:12,0:12:4.29:4,0,8	./.	0/0:23,0:23:54.16:0,54,1185	1/1:15,6:21:42.14:1418,42,0	1/1:9,10:20:27.54:921,28,0	./.
chr10	69744125	.	C	CAT	1425.93	PASS	AB=0.984;AC=13;AF=0.241;AN=54;BaseQRankSum=6.169;DP=498;FS=1.570;HRun=0;HaplotypeScore=113.1964;InbreedingCoeff=0.2296;MQ=51.42;MQ0=7;MQRankSum=-5.776;QD=7.71;ReadPosRankSum=-4.914;VQSLOD=2.1653;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/0:16,0:16:11.12:0,11,220	0/0:6,0:6:17.54:0,18,216	0/0:25,0:7:15.05:0,15,211	0/0:30,0:4:5.51:0,6,69	0/0:27,0:27:42.09:0,42,554	0/0:29,0:29:87.25:0,87,1257	0/0:16,0:16:45.09:0,45,599	1/1:35,4:39:99:802,99,0	0/0:8,0:8:24.06:0,24,345	0/0:22,0:22:63.20:0,63,924	0/0:23,0:23:66.21:0,66,981	0/0:17,0:17:44.27:0,44,656	0/0:14,0:14:42.14:0,42,636	0/0:14,0:14:42.13:0,42,616	0/0:19,0:19:57.17:0,57,827	0/1:11,0:11:99:131,0,102	0/1:22,0:22:2.51:3,0,255	0/1:14,1:15:86.45:86,0,146	0/1:16,0:16:99:101,0,265	0/1:24,0:24:99:123,0,214	1/1:8,0:8:2.92:17,3,0	0/0:12,0:12:36.06:0,36,465	1/1:4,10:14:11.16:163,11,0	./.	0/0:22,0:22:66.17:0,66,923	0/1:17,0:17:91.73:92,0,278	0/1:18,1:19:65.99:66,0,216	0/0:5,0:5:12.04:0,12,179
chr10	69744136	.	G	GTA	2823.79	PASS	AC=12;AF=0.231;AN=52;BaseQRankSum=8.656;DP=469;FS=2.209;HRun=0;HaplotypeScore=109.4000;InbreedingCoeff=0.9560;MQ=54.96;MQ0=6;MQRankSum=-3.550;QD=21.89;ReadPosRankSum=-2.456;VQSLOD=3.7568;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:4,11:15:18.04:302,18,0	0/0:5,0:5:12.04:0,12,154	0/0:25,0:9:17.61:0,18,182	0/0:30,0:4:8.97:0,9,92	1/1:4,21:25:29.58:477,30,0	0/0:27,0:27:78.25:0,78,1000	0/0:13,0:13:36.10:0,36,449	1/1:30,10:40:98.68:1084,99,0	0/0:8,0:8:15.05:0,15,193	0/0:22,0:22:63.19:0,63,794	0/0:25,0:25:69.22:0,69,886	0/0:15,0:15:39.13:0,39,500	0/0:14,0:14:39.13:0,39,501	0/0:14,0:14:39.11:0,39,488	0/0:18,0:18:45.12:0,45,551	0/0:12,0:12:33.09:0,33,410	1/1:20,0:20:50.94:598,51,0	1/1:14,1:15:36.04:409,36,0	0/0:15,0:15:45.15:0,45,577	0/0:17,0:17:24.04:0,24,290	./.	0/0:10,0:10:24.08:0,24,309	1/1:6,8:14:8.18:134,8,0	./.	0/0:20,0:20:60.19:0,60,772	0/0:15,0:15:42.13:0,42,529	0/0:16,0:16:27.04:0,27,340	0/0:5,0:5:15.05:0,15,193
chr10	69744155	.	CAT	C	2462.36	PASS	AB=0.909;AC=13;AF=0.241;AN=54;BaseQRankSum=7.759;DP=413;FS=1.686;HRun=0;HaplotypeScore=99.3029;InbreedingCoeff=0.8290;MQ=62.77;MQ0=2;MQRankSum=1.009;QD=17.10;ReadPosRankSum=-4.966;VQSLOD=2.5346;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:4,13:17:18.05:226,18,0	0/0:4,0:4:12.04:0,12,201	0/1:9,1:8:4.27:6,0,4	0/0:15,0:6:1.07:0,1,4	1/1:4,17:21:14.74:190,15,0	0/0:28,0:28:28.32:0,28,1001	0/0:10,0:10:24.08:0,24,398	1/1:14,32:45:93.27:1150,93,0	0/0:3,0:3:9.03:0,9,151	0/0:21,1:22:22.01:0,22,911	0/0:25,0:25:63.19:0,63,1023	0/0:12,0:12:27.08:0,27,426	0/0:13,0:13:21.07:0,21,342	0/0:8,0:8:12.04:0,12,201	0/0:13,0:13:30.10:0,30,499	0/0:8,0:8:18.04:0,18,275	1/1:3,18:21:45.14:572,45,0	1/1:3,12:15:30.10:382,30,0	0/0:6,0:15:38.94:0,39,352	0/0:6,0:15:23.97:0,24,204	0/0:2,0:8:3:0,3,27	0/0:6,0:6:12.04:0,12,197	1/1:4,10:14:9.03:115,9,0	./.	0/0:19,0:19:48.16:0,48,799	0/0:6,0:15:29.57:0,30,282	0/0:8,0:15:25.57:0,26,256	0/0:2,0:9:20.99:0,21,181
chr10	69745101	.	TTA	T	1765.77	PASS	AC=4;AF=0.071;AN=56;BaseQRankSum=7.323;DP=598;FS=4.568;HRun=0;HaplotypeScore=76.7841;InbreedingCoeff=0.9782;MQ=73.67;MQ0=1;MQRankSum=-0.864;QD=34.62;ReadPosRankSum=1.071;VQSLOD=5.5194;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	1/1:0,25:24:54.18:862,54,0	0/0:6,0:6:18.06:0,18,360	0/0:21,0:20:38.14:0,38,508	0/0:12,0:10:11.51:0,12,307	1/1:0,26:26:72.03:1025,72,0	0/0:30,0:30:90.26:0,90,1665	0/0:24,0:24:72.06:0,72,1218	0/0:31,0:31:93.13:0,93,1578	0/0:16,0:16:48.14:0,48,859	0/0:27,0:27:78.17:0,78,1206	0/0:22,0:22:63.05:0,63,994	0/0:24,0:24:72.21:0,72,1324	0/0:17,0:17:51.15:0,51,986	0/0:20,0:20:60.17:0,60,1019	0/0:26,0:26:78.25:0,78,1501	0/0:18,0:17:54.15:0,54,983	0/0:18,0:18:54.11:0,54,1005	0/0:20,0:20:59.78:0,60,938	0/0:17,0:17:47.88:0,48,778	0/0:36,0:36:99:0,107,1882	0/0:16,0:16:48.04:0,48,781	0/0:22,0:22:66.13:0,66,1109	0/0:17,0:17:51.07:0,51,832	0/0:11,0:11:33.11:0,33,640	0/0:18,0:18:54.16:0,54,981	0/0:33,0:33:99:0,99,1816	0/0:33,0:33:96.21:0,96,1718	0/0:12,0:12:36.11:0,36,632
chr10	69745102	.	TA	T	338.44	PASS	AB=0.952;AC=5;AF=0.089;AN=56;BaseQRankSum=10.207;DP=610;FS=12.131;HRun=11;HaplotypeScore=72.9931;InbreedingCoeff=0.8295;MQ=74.30;MQ0=1;MQRankSum=-2.026;QD=4.64;ReadPosRankSum=0.906;VQSLOD=0.4881;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:25,0:24:48.05:197,48,0	0/0:6,0:6:18.05:0,18,192	0/0:21,0:20:14.79:0,15,202	0/0:14,0:12:16.43:0,16,176	1/1:28,0:28:56.92:262,57,0	0/0:30,0:30:84.15:0,84,869	0/0:21,2:23:13.86:0,14,550	0/0:31,2:33:37.89:0,38,787	0/0:16,0:16:39.09:0,39,409	0/0:27,0:27:60.11:0,60,611	0/0:21,1:22:26.47:0,26,472	0/0:24,0:24:63.15:0,63,668	0/0:17,0:17:51.10:0,51,529	0/0:20,0:20:42.09:0,42,441	0/0:26,0:26:72.18:0,72,768	0/0:19,0:18:45.11:0,45,480	0/0:17,1:18:26.49:0,26,487	0/1:19,1:20:1.25:1,0,389	0/0:18,0:18:36.07:0,36,366	0/0:34,0:36:96.23:0,96,974	0/0:15,1:16:14.44:0,14,351	0/0:22,0:22:57.12:0,57,591	0/0:16,1:17:17.48:0,17,385	0/0:11,0:11:30.08:0,30,320	0/0:19,0:19:51.11:0,51,530	0/0:33,1:34:71.57:0,72,948	0/0:34,1:35:65.53:0,66,877	0/0:13,0:13:36.01:0,36,354
chr10	69745348	.	TACACACACACAC	T	653.31	PASS	AB=0.881;AC=13;AF=0.295;AN=44;BaseQRankSum=4.800;DP=457;FS=18.858;HRun=0;HaplotypeScore=154.3768;InbreedingCoeff=0.3663;MQ=62.40;MQ0=20;MQRankSum=-3.114;QD=4.36;ReadPosRankSum=0.655;VQSLOD=1.3429;culprit=HRun;set=input10	GT:AD:DP:GQ:PL	0/1:31,0:31:0:0,0,0	0/0:9,0:9:11.72:0,12,573	./.	./.	0/1:7,0:9:0:0,0,0	0/0:21,0:21:30.10:0,30,1488	0/0:15,0:15:3.01:0,3,164	./.	./.	0/0:9,0:9:10.57:0,11,201	0/0:6,0:6:3.01:0,3,143	0/0:18,0:18:18.06:0,18,768	0/0:5,0:5:6.02:0,6,335	0/0:8,0:8:9.03:0,9,415	0/0:19,0:19:15.94:0,16,724	0/0:7,0:8:9.03:0,9,199	0/1:15,0:15:0.40:1,0,0	1/1:11,0:10:3.01:84,3,0	1/1:18,0:17:2.51:10,3,0	./.	0/0:41,0:39:0.47:0,0,1	0/0:10,0:10:3.01:0,3,122	1/1:6,1:8:6.02:185,6,0	./.	0/0:14,0:15:8.85:0,9,404	0/1:13,5:17:99:113,0,106	1/1:18,4:22:6.02:185,6,0	0/1:12,3:15:49.06:195,0,49
chr10	69745488	.	G	GT	3762.63	PASS	AB=1.000;AC=13;AF=0.232;AN=56;BaseQRankSum=-6.893;DP=656;FS=0.789;HRun=7;HaplotypeScore=79.4450;InbreedingCoeff=0.8977;MQ=81.00;MQ0=3;MQRankSum=-2.665;QD=21.02;ReadPosRankSum=2.650;VQSLOD=3.3138;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:7,28:35:56.32:887,56,0	0/0:10,0:10:30.01:0,30,276	0/0:51,0:45:26.91:0,27,484	0/1:41,0:29:31.02:31,0,228	1/1:4,31:35:84.12:964,84,0	0/0:18,0:18:48.04:0,48,451	0/0:14,0:14:39.52:0,40,371	0/0:29,0:29:40.98:0,41,551	0/0:7,0:7:21.03:0,21,202	0/0:27,0:27:72.05:0,72,679	0/0:30,0:30:75.10:0,75,719	0/0:26,0:26:78:0,78,739	0/0:18,0:18:48.07:0,48,462	0/0:14,0:14:39.06:0,39,376	0/0:21,0:21:59.73:0,60,547	0/0:15,0:15:45.07:0,45,434	1/1:2,12:14:30.09:362,30,0	1/1:1,16:17:39.12:471,39,0	0/0:26,0:26:69.07:0,69,656	0/0:38,0:38:99:0,108,1037	0/0:20,0:20:48.03:0,48,455	0/0:26,0:26:78.12:0,78,749	1/1:3,24:27:66.12:794,66,0	1/1:2,8:10:21.06:254,21,0	0/0:31,0:31:90.08:0,90,845	0/0:23,0:23:57.09:0,57,550	0/0:23,0:23:60.06:0,60,568	0/0:9,0:9:27.04:0,27,260
chr10	69746575	.	A	AG	11271.31	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=1.257;DP=732;FS=2.392;HRun=2;HaplotypeScore=104.3203;InbreedingCoeff=0.9957;MQ=92.96;MQ0=0;MQRankSum=-10.920;QD=35.44;ReadPosRankSum=-0.423;VQSLOD=4.5988;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	1/1:3,35:38:96.28:1356,96,0	0/0:18,0:18:51.16:0,51,631	0/0:46,0:46:99:0,132,1603	0/0:34,0:33:72.23:0,72,960	1/1:4,29:33:60.18:828,60,0	0/0:19,0:19:57.17:0,57,694	0/0:28,0:28:84.24:0,84,1015	1/1:11,23:34:96.27:1339,96,0	0/0:34,0:34:93.27:0,93,1135	0/0:29,0:29:81.25:0,81,1004	0/0:27,0:27:78.24:0,78,967	0/0:24,0:24:69.22:0,69,855	0/0:28,0:28:81.22:0,81,975	0/0:27,0:27:81.25:0,81,1004	0/0:27,0:27:75.21:0,75,905	0/0:27,0:27:81.25:0,81,1004	1/1:3,18:21:60.20:861,60,0	1/1:0,4:4:12.04:173,12,0	1/1:6,9:15:42.09:560,42,0	1/1:4,32:36:81.27:1160,81,0	1/1:2,12:14:36.12:518,36,0	0/0:20,0:20:60.15:0,60,716	1/1:1,27:28:60.20:863,60,0	1/1:7,16:23:54.14:748,54,0	0/0:26,0:26:75.22:0,75,917	1/1:5,22:27:75.25:1078,75,0	1/1:5,25:28:81.26:1145,81,0	1/1:3,12:15:45.15:643,45,0
chr10	69746615	.	AC	A	12541.63	PASS	AC=26;AF=0.464;AN=56;BaseQRankSum=18.967;DP=736;FS=1.521;HRun=1;HaplotypeScore=99.9727;InbreedingCoeff=0.9989;MQ=85.59;MQ0=0;MQRankSum=-12.100;QD=39.07;ReadPosRankSum=-2.302;VQSLOD=4.2253;culprit=FS;set=input10	GT:AD:DP:GQ:PL	1/1:0,34:34:96.28:1318,96,0	0/0:15,0:15:45.13:0,45,694	0/0:26,0:26:75.71:0,76,1136	0/0:27,0:27:78.22:0,78,1218	1/1:0,40:40:99:1335,99,0	0/0:26,0:26:75.24:0,75,1173	0/0:33,0:33:99:0,99,1570	1/1:1,34:35:99:1445,105,0	0/0:32,0:32:93.32:0,93,1463	0/0:32,0:32:96.32:0,96,1510	0/0:27,0:27:81.28:0,81,1283	0/0:26,0:26:75.26:0,75,1186	0/0:33,0:33:99:0,99,1556	0/0:32,0:32:96.33:0,96,1525	0/0:30,0:30:90.31:0,90,1434	0/0:28,0:28:84.29:0,84,1333	1/1:0,15:15:45.15:629,45,0	1/1:0,6:6:18.06:252,18,0	1/1:1,17:18:51.17:711,51,0	1/1:1,40:41:99:1634,123,0	1/1:0,13:13:39.09:523,39,0	0/0:21,0:21:60.20:0,60,949	1/1:0,27:27:75.25:1042,75,0	1/1:0,19:19:45.12:617,45,0	0/0:27,0:27:81.27:0,81,1273	1/1:0,24:24:72.24:1006,72,0	1/1:1,28:29:87.26:1192,87,0	1/1:0,20:20:60.20:839,60,0
chr10	69746744	.	AGT	A	3895.57	PASS	AC=14;AF=0.250;AN=56;BaseQRankSum=14.955;DP=779;FS=5.100;HRun=0;HaplotypeScore=158.1465;InbreedingCoeff=0.9948;MQ=91.94;MQ0=0;MQRankSum=-6.785;QD=18.82;ReadPosRankSum=-1.389;VQSLOD=3.5257;culprit=HaplotypeScore;set=input10	GT:AD:DP:GQ:PL	0/0:38,0:38:30.83:0,31,845	0/0:10,0:10:30.10:0,30,579	0/0:39,0:39:99:0,105,1702	0/0:30,0:30:84.08:0,84,1540	0/0:32,0:32:83.57:0,84,818	0/0:21,0:21:63.22:0,63,1217	0/0:36,0:36:99:0,108,2086	1/1:47,4:51:99:1117,134,0	0/0:38,0:38:99:0,114,2202	0/0:30,0:30:90.30:0,90,1700	0/0:18,0:18:54.19:0,54,1025	0/0:25,0:25:72.25:0,72,1391	0/0:25,0:25:75.26:0,75,1440	0/